BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (511 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254547812|gb|ACT56689.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 511

 Score = 1060 bits (2741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/511 (100%), Positives = 511/511 (100%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK
Sbjct: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY
Sbjct: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY
Sbjct: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT
Sbjct: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG
Sbjct: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN
Sbjct: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL
Sbjct: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA
Sbjct: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL
Sbjct: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511


>gi|315122341|ref|YP_004062830.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495743|gb|ADR52342.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 512

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/510 (80%), Positives = 462/510 (90%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K REK YISTAIAYPNA+PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDE+GQKIAK+
Sbjct: 3   KGREKFYISTAIAYPNAKPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEYGQKIAKS 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQNAG+ TK+FVDQNS +FR MADV  ISYDDFIRTTEKRHHDTCRILW+KI DKGDIYK
Sbjct: 63  AQNAGIETKIFVDQNSADFRQMADVFGISYDDFIRTTEKRHHDTCRILWQKILDKGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G YSGWYSLRDE Y  DDEVYKG DGQ+YNAQ NPVQWMEEEGYFFRLSAYQDKLL+YY+
Sbjct: 123 GFYSGWYSLRDEMYCGDDEVYKGEDGQHYNAQKNPVQWMEEEGYFFRLSAYQDKLLAYYD 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHPEFILP+ERRNE++SFVKSGLKDLS+SRKTFDWGIKIP+DPQYIMYVWIDALTNYLT 
Sbjct: 183 SHPEFILPLERRNEIVSFVKSGLKDLSISRKTFDWGIKIPNDPQYIMYVWIDALTNYLTA 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           TG L +P+G KAKFWPADLHVIGKDI+RFHA+YWPAFLLSANLPLPK +FSHGFIL+KGE
Sbjct: 243 TGLLPHPNGEKAKFWPADLHVIGKDIVRFHAVYWPAFLLSANLPLPKTIFSHGFILNKGE 302

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           KISKSLGNVIDP+EVI+E+GVDALRYFL+R+IACGKDGFYD + +K RVNADLANGIGNL
Sbjct: 303 KISKSLGNVIDPMEVIKEIGVDALRYFLIRDIACGKDGFYDINTVKNRVNADLANGIGNL 362

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSRS+SMI+K+Y G++P PG F E D+ IL  CS+ +QEIRE+M  QLIHRA+AQVIS+V
Sbjct: 363 VSRSISMIVKNYGGVMPNPGVFVEFDKEILYACSQNIQEIREHMDGQLIHRAVAQVISIV 422

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           SEVDRYF  QKPW+L KT+ DRA+TVLYVTV+V+RQLAILLQ FVP +ANKIFDIL +AD
Sbjct: 423 SEVDRYFATQKPWDLVKTDRDRAATVLYVTVDVVRQLAILLQPFVPGMANKIFDILSIAD 482

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           ENR F  LDQRLK G ++ K F P+FPRFL
Sbjct: 483 ENRSFAHLDQRLKVGLVIDKDFMPLFPRFL 512


>gi|15888821|ref|NP_354502.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|25009368|sp|Q8UFA2|SYM_AGRT5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15156579|gb|AAK87287.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 516

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/513 (58%), Positives = 399/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG+DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  FR+M  +L+ S DDFIRTTE+RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY +DE    ADG  Y  Q  PV+W+EEE YFF+LS YQ+KLL  Y
Sbjct: 121 KDSYAGWYSVRDEAYYAEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQEKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNE+ISFVKSGLKDLS+SR TFDWGIK+PDDP+++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+V++HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++   G+D +RYF +RE++ G+DG Y ++G+  R+NADLANGIGN
Sbjct: 301 EKMSKSLGNVVDPANLVAHFGLDPVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IPTPGAF + D+++L+    +L   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQIPTPGAFNDDDKAMLASADGLLAVCREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF +Q+PW LKKT+P+R  TVLYVT EV+RQ+ ILLQ F+P+   K+ D++   
Sbjct: 421 VSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPQSCEKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL PG  L     P+FPR++
Sbjct: 481 ADGRDFTALGEAGRLAPGTPLEAP-KPVFPRYV 512


>gi|325292849|ref|YP_004278713.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060702|gb|ADY64393.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 516

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/513 (58%), Positives = 398/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG+DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  FR+M  +L+ S DDFIRTTE+RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY +DE    ADG  Y  Q  PV+W+EEE YFF+LS YQDKLL  Y
Sbjct: 121 KDSYAGWYSVRDEAYYGEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNE+ISFVKSGLKDLS+SR TFDWGIK+PDDP+++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+V++HGF+L+KG
Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++G+  R+NADLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IPTPG  T+ D+++L+    +L   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQIPTPGPLTDEDKAMLASADGLLALCREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF +Q+PW LKKT+P+R  TVLYVT EV+RQ+ ILLQ F+P    K+ D++   
Sbjct: 421 VSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPGSCEKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL PG  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVPGTPLEAP-KPVFPRYV 512


>gi|227822152|ref|YP_002826123.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341152|gb|ACP25370.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 516

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/513 (59%), Positives = 396/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +   D+NS  F  MA+VL+ S DDFIRTTEKRHH+  + +W ++ + GD+Y
Sbjct: 61  TARKEGVSPQELADRNSAEFEKMAEVLNASNDDFIRTTEKRHHEASQAIWIRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRDDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGI++P+DP ++MYVW+DALTNYLT
Sbjct: 181 EDNPDFIGPSERRNEVISFVKSGLKDLSVSRTTFDWGIRVPNDPAHVMYVWVDALTNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGYL +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYLTDPSGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  TE DE++L+    +++  RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQIPACGPLTEEDEAMLAAADALIETTREEMGRQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P+R +TVLYVT EV+RQ+AILLQ F+P  A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPERMATVLYVTAEVVRQIAILLQPFMPDSAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            E R F  L +  RL  G  L     P+FPR++
Sbjct: 481 AEKRDFVHLGKSGRLVSGTPLEAP-KPVFPRYI 512


>gi|150396508|ref|YP_001326975.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028023|gb|ABR60140.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 516

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/513 (58%), Positives = 395/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  F++MA +L+ S DDFIRTTEKRHH+  + +W ++ + GD+Y
Sbjct: 61  TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEKRHHEASQAIWTRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQD+LL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELREDGLRYGPQGTPVEWVEEESYFFRLSAYQDRLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYVT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGYL +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  T+ D+++L+    +++  RE M  QLIHRALA  I++
Sbjct: 361 LASRSLSMIVKNCDGQIPVCGPLTDEDKAMLAAADSLIETAREEMGRQLIHRALAATIAI 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P+R +TVLYVT EV+RQ+AILLQ F+P  A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPNRMATVLYVTAEVVRQVAILLQPFMPDSAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F  L +  RL  G  L     P+FPR++
Sbjct: 481 ADRRDFAHLGEGGRLVSGTPLEAP-KPVFPRYV 512


>gi|116252220|ref|YP_768058.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256868|emb|CAK07962.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 516

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/513 (57%), Positives = 397/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADSGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ ++ R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIRTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  GA  + D ++L+    +    RE+M  Q IHRALA +IS+
Sbjct: 361 LASRSLSMIVKNCDGKIPECGALNDEDRAMLAEVDALHASTREDMGKQQIHRALASIISV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P+R  TVLYVT EV+RQ+AILLQ F+P+ + K+ D++  A
Sbjct: 421 VSETDRYFAGQAPWALKKTDPERMGTVLYVTAEVVRQIAILLQPFMPESSAKLLDLVAAA 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVAGTALEAP-TPVFPRYV 512


>gi|15965354|ref|NP_385707.1| methionyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307312729|ref|ZP_07592360.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|25009383|sp|Q92PX0|SYM_RHIME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15074534|emb|CAC46180.1| Probable methionyl-tRNA synthetase (methionine--tRNA ligase)
           [Sinorhizobium meliloti 1021]
 gi|306899454|gb|EFN30086.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 516

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/513 (57%), Positives = 394/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  F++MA +L+ S DDFIRTTE+RHH+  + +W ++ + GD+Y
Sbjct: 61  TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRGDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYVT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG L +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG +P  G  T+ D+++L+    ++   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P R +TVLYVT EV+RQ+AILLQ F+P+ A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPSRMATVLYVTAEVVRQVAILLQPFMPESAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F  L +  RL  G  L     P+FPR++
Sbjct: 481 TDRRDFAHLGEAGRLVSGTPLEAP-KPVFPRYV 512


>gi|307317213|ref|ZP_07596654.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897301|gb|EFN28046.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 516

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/513 (57%), Positives = 394/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  F++MA +L+ S DDFIRTTE+RHH+  + +W ++ + GD+Y
Sbjct: 61  TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRGDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYVT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG L +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFTLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG +P  G  T+ D+++L+    ++   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P R +TVLYVT EV+RQ+AILLQ F+P+ A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPIRMATVLYVTAEVVRQVAILLQPFMPESAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F  L +  RL  G  L     P+FPR++
Sbjct: 481 TDRRDFAHLGEAGRLVSGTPLEAP-KPVFPRYV 512


>gi|241204713|ref|YP_002975809.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858603|gb|ACS56270.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 516

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/513 (57%), Positives = 395/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+PDDP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPDDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  GA ++ D+++L+    +    RE M  Q IHRALA +IS+
Sbjct: 361 LASRSLSMIVKNCDGKIPECGALSDEDKAMLAEVDALHASTREEMGKQQIHRALASIISV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P+R  TVLYVT EV+RQ+AILL+ F+P  + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPERMGTVLYVTAEVVRQIAILLRPFMPDSSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLTAGTTLEAP-TPVFPRYV 512


>gi|327193417|gb|EGE60316.1| methionyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 519

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 293/513 (57%), Positives = 391/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 4   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F  MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIY
Sbjct: 64  TARAEGITAQALADRNSGEFEAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++Y
Sbjct: 124 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 184 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 244 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 304 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  ++ DE +L+    +    RE+M  Q IHRALA +I++
Sbjct: 364 LASRSLSMIVKNCDGKIPECGPLSDEDEVMLAQADALHASTREDMGKQQIHRALASIIAV 423

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ DI+   
Sbjct: 424 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDIVAAP 483

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 484 ADKRAFAALGEAGRLVAGTPLEAP-TPVFPRYV 515


>gi|190891834|ref|YP_001978376.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|190697113|gb|ACE91198.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 516

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 291/513 (56%), Positives = 394/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL++A LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMAAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  GA ++ D+++L+    +    RE+M  Q IHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGKIPECGALSDEDKAMLAQADALHASTREDMGKQQIHRALASIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPVRMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVAGTPLEAP-TPVFPRYV 512


>gi|86357775|ref|YP_469667.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281877|gb|ABC90940.1| methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 516

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 291/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGIAPQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMADNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLP++VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPQRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  T+ D+++L+    +    RE+M  Q IHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGKIPECGPLTDEDKAMLAQADALHASTREDMGKQQIHRALASIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P+ + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPESSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVAGTPLEAP-TPVFPRYV 512


>gi|209549396|ref|YP_002281313.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535152|gb|ACI55087.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 516

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 290/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVSHFGLDQVRYFFLREVSFGQDGSYSEEAIGIRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  ++ D+++L+    +    R++M  Q IHRALA +IS+
Sbjct: 361 LASRSLSMIVKNCDGKIPECGVLSDEDKAMLAQADALHASTRDDMGKQQIHRALASIISV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGESGRLLAGTPLEAP-TPVFPRYV 512


>gi|222086010|ref|YP_002544542.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723458|gb|ACM26614.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 517

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 292/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+TAIAYPN +PHIGHAYE+I  D +ARF RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTEKTPFYITTAIAYPNGKPHIGHAYELIATDAMARFQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +   D+NS  F+ M  +L+ S DD+IRTTE+RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGLSPQELADRNSAEFQAMGKLLNSSNDDYIRTTEERHHETSRNIWNLMADAGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W++EE YFF+LS YQD+LL  Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVQEESYFFKLSEYQDRLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSISRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +  +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNNPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  TE D+++L+    +L   RE+M  Q +HRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGKIPECGELTEEDKALLAQADALLASTREDMGKQALHRALASIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P R +TVLYVT +V+RQ+ ILLQ F+P  + K+ D++ + 
Sbjct: 421 VSESDRYFAGQEPWALKKTDPARMATVLYVTADVVRQIGILLQPFMPDSSTKLLDLIAIP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL PG  L     P+FPR++
Sbjct: 481 SDKRDFAALGEAGRLVPGTPLEAP-KPVFPRYV 512


>gi|222148592|ref|YP_002549549.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735578|gb|ACM36541.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 525

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 291/510 (57%), Positives = 382/510 (74%), Gaps = 3/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG DV F TGTDEHGQK+ + A+
Sbjct: 2   KDTFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGKDVFFLTGTDEHGQKMQQTAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N G+  +    +NS  FR M  +L+ S DDFIRTTE RHH   + +WK++   GDIYK  
Sbjct: 62  NEGIAPEELAKRNSDEFRAMGKLLNASNDDFIRTTEARHHAASQEIWKRMEKNGDIYKDS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE    ADG  Y  Q  PV+W+EEE YFFRLSAY+DKLL  YE  
Sbjct: 122 YAGWYSVRDEAYYAEDETEMRADGVRYGPQGTPVEWVEEESYFFRLSAYEDKLLKLYEDQ 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P ERRNEV+SFVKSGLKDLS+SR TFDWGIK+P D +++MYVW+DALTNY+T TG
Sbjct: 182 PDFIGPNERRNEVLSFVKSGLKDLSMSRTTFDWGIKVPGDDKHVMYVWVDALTNYITATG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL + +G +AK+WPAD H+IGKDI+RFHA+YWPAFLLSA + LPK++F+HGF+L+KGEK+
Sbjct: 242 YLTDENGPRAKYWPADAHIIGKDIIRFHAVYWPAFLLSAGVALPKRIFAHGFVLNKGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP +++++ G+D +RYFL REI+ G+DG  + + +  R+NADLANGIGNL S
Sbjct: 302 SKSLGNVVDPFDLLQQFGLDNVRYFLCREISFGQDGNCNAELIAPRINADLANGIGNLAS 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ DG +P PG  TE+DE+IL+     +   RE M  Q IH+A+  ++++V+E
Sbjct: 362 RSLSMIAKNLDGKVPQPGPLTEADEAILATADEAIAICREEMSRQQIHKAVGAIMNIVNE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            DRYF AQ PW L+KT+  R  TVLYVT EV+RQ+AIL Q  +P  A K+ D++ +A ++
Sbjct: 422 ADRYFAAQAPWVLRKTDVPRMETVLYVTAEVVRQIAILFQPIMPDSAAKLLDLVAIAPDD 481

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           R F  L +  RL PG  L     P+FPR++
Sbjct: 482 RVFAKLGKAGRLTPGTEL-PAVSPVFPRYV 510


>gi|239831997|ref|ZP_04680326.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824264|gb|EEQ95832.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 525

 Score =  622 bits (1603), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 281/508 (55%), Positives = 373/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G DV F TGTDEHG K+ ++A+
Sbjct: 15  REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQSAR 74

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MADVL+ S DD+IRT+E+RH+   + +WK ++D GDIYKG 
Sbjct: 75  KEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMADNGDIYKGG 134

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLS+YQD+LL  YE +
Sbjct: 135 YAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSSYQDRLLDLYEQN 194

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 195 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 254

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  DG K  +WPAD H+IGKDI RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++GEK+
Sbjct: 255 YPDTTDG-KWGYWPADAHIIGKDISRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRGEKM 313

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDP  ++E  G+D LRYFL+RE+  G+DG Y  D +  R NADLAN +GNL  
Sbjct: 314 SKSLGNVIDPFGLVERYGLDQLRYFLMREVPFGQDGSYSHDAIVNRTNADLANDLGNLAQ 373

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PG F+E+D++IL      L   R+ M +Q +H AL  + ++V+E
Sbjct: 374 RSLSMIAKNCEGKVPVPGEFSEADKAILDQAEAALDTARKAMDDQALHLALGGIFAVVAE 433

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EVIR++ I++Q F+P+ A K+ DIL +  + 
Sbjct: 434 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVIRRVGIMVQPFIPQSAEKLLDILAIPADK 493

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 494 RQFSDVTASQLVGGTDLPAPQPVFPRYV 521


>gi|225852500|ref|YP_002732733.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256113542|ref|ZP_05454368.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264009|ref|ZP_05466541.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|265994915|ref|ZP_06107472.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|225640865|gb|ACO00779.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|262766028|gb|EEZ11817.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263094153|gb|EEZ18075.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409016|gb|ADZ66081.1| methionyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538726|gb|ADZ86941.1| methionyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 515

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 377/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   +++W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|254719073|ref|ZP_05180884.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984063|ref|ZP_06096798.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838355|ref|ZP_07471200.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662655|gb|EEZ32916.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406495|gb|EFM62729.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 515

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 280/508 (55%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-KRWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  V ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEAARKAMDDQALHLALGAVFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPTDK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|17987270|ref|NP_539904.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17982947|gb|AAL52168.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 544

 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 32  REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   +++W+ +   GDIYKG 
Sbjct: 92  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGG 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 152 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 211

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 212 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 271

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 272 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 330

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 331 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 390

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 391 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 450

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL    + 
Sbjct: 451 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAAPADK 510

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 511 RQFADVLASPLAGGTDLPAPQPVFPRYV 538


>gi|306840483|ref|ZP_07473242.1| methionyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289498|gb|EFM60716.1| methionyl-tRNA synthetase [Brucella sp. BO2]
          Length = 515

 Score =  619 bits (1595), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILGQADAALEAARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|153009409|ref|YP_001370624.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561297|gb|ABS14795.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 515

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 280/508 (55%), Positives = 372/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MADVL+ S DD+IRT+E+RH+   + +WK ++  GDIYKG 
Sbjct: 63  KEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMAGNGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE +
Sbjct: 123 YAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEKN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  K  +WPAD H+IGKDI RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTSD-EKWGYWPADAHIIGKDISRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDP  ++E  G+D LRYFL+RE+  G+DG Y  D +  R NADLAN +GNL  
Sbjct: 302 SKSLGNVIDPFGLVERYGLDQLRYFLMREVPFGQDGSYSHDAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PG F+++D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPVPGEFSDADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EVIR++ I++Q F+P+ A K+ DIL +  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVIRRVGIMVQPFIPQSAEKLLDILAIPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFSDVTASQLVGGADLPAPQPVFPRYV 509


>gi|148560370|ref|YP_001258936.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371627|gb|ABQ61606.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 515

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YTGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|23501876|ref|NP_698003.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225627473|ref|ZP_03785510.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701747|ref|ZP_05163575.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706809|ref|ZP_05168637.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710081|ref|ZP_05171892.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714082|ref|ZP_05175893.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716862|ref|ZP_05178673.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031577|ref|ZP_05445191.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|260168708|ref|ZP_05755519.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218663|ref|ZP_05932944.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261314276|ref|ZP_05953473.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317630|ref|ZP_05956827.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321839|ref|ZP_05961036.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261752300|ref|ZP_05996009.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261758184|ref|ZP_06001893.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988665|ref|ZP_06101222.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|25009345|sp|P59078|SYM_BRUSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23347815|gb|AAN29918.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225617478|gb|EEH14523.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260923752|gb|EEX90320.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294529|gb|EEX98025.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296853|gb|EEY00350.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303302|gb|EEY06799.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738168|gb|EEY26164.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261742053|gb|EEY29979.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|264660862|gb|EEZ31123.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 515

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|256044655|ref|ZP_05447559.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564001|ref|ZP_05834487.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991079|ref|ZP_06103636.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|25009373|sp|Q8YH17|SYM_BRUME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|260154017|gb|EEW89109.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001863|gb|EEZ14438.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 515

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   +++W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL    + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAAPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|256369417|ref|YP_003106925.1| methionine--tRNA ligase [Brucella microti CCM 4915]
 gi|255999577|gb|ACU47976.1| methionine--tRNA ligase [Brucella microti CCM 4915]
          Length = 515

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGTIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|237815420|ref|ZP_04594418.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790257|gb|EEP64467.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 530

 Score =  618 bits (1593), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 18  REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 77

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 78  KEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 137

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 138 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 197

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 198 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 257

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 258 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 316

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 317 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 376

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 377 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 436

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 437 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 496

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 497 RQFADVLASPLAGGTDLPAPQPVFPRYV 524


>gi|256061087|ref|ZP_05451242.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325089|ref|ZP_05964286.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301069|gb|EEY04566.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 515

 Score =  618 bits (1593), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPRDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|254704289|ref|ZP_05166117.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754957|ref|ZP_05998666.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261744710|gb|EEY32636.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 515

 Score =  617 bits (1592), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|62289919|ref|YP_221712.1| methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699846|ref|YP_414420.1| methionyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024161|ref|YP_001934929.1| methionine--tRNA ligase [Brucella abortus S19]
 gi|254697361|ref|ZP_05159189.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730259|ref|ZP_05188837.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260545332|ref|ZP_05821073.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260757954|ref|ZP_05870302.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761777|ref|ZP_05874120.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196051|gb|AAX74351.1| MetG, methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615947|emb|CAJ10970.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Methionyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189019733|gb|ACD72455.1| methionine--tRNA ligase [Brucella abortus S19]
 gi|260096739|gb|EEW80614.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260668272|gb|EEX55212.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672209|gb|EEX59030.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 515

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 279/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|306843870|ref|ZP_07476465.1| methionyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275625|gb|EFM57349.1| methionyl-tRNA synthetase [Brucella sp. BO1]
          Length = 515

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-KRWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEAARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVQASPLAGGTDLPAPQPVFPRYV 509


>gi|256159715|ref|ZP_05457462.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254977|ref|ZP_05460513.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222163|ref|ZP_05936444.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265998128|ref|ZP_06110685.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920747|gb|EEX87400.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262552596|gb|EEZ08586.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 515

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GW+S+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWHSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|254693711|ref|ZP_05155539.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213983|ref|ZP_05928264.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915590|gb|EEX82451.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 515

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 376/508 (74%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ + +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAIDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|163843264|ref|YP_001627668.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673987|gb|ABY38098.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 515

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P P AF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPSAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|161618949|ref|YP_001592836.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566464|ref|ZP_05836934.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335760|gb|ABX62065.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260155982|gb|EEW91062.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 515

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVK GLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKLGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|114704621|ref|ZP_01437529.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539406|gb|EAU42526.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 518

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 285/509 (55%), Positives = 372/509 (73%), Gaps = 3/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y++TAI+YPN +PHIGHAYE+I  D LARF RLDG DV F TGTDEHG K+ + A+ 
Sbjct: 3   ERYYLTTAISYPNGKPHIGHAYELIATDALARFKRLDGYDVFFLTGTDEHGIKMLQNARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D NS  F+ M+  L  S DDFIRT+E RH   C+ +WK++ + GDIYK  Y
Sbjct: 63  QGLTPRELADANSAEFQRMSAALGGSNDDFIRTSEARHKIACQAIWKRMEEAGDIYKDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE +   DG     Q  PV W+EEE YFFRLS +QD LL  Y  +P
Sbjct: 123 SGWYSVRDEAYYGEDETHISEDGTRIGPQGTPVDWIEEESYFFRLSNFQDPLLKLYAENP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P ERRNEVISFVKSGL+DLS+SR TFDWGI +P D +++MYVW+DALTNYLT TGY
Sbjct: 183 DFIGPNERRNEVISFVKSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTATGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++ +G + +FWPADLHVIGKDI RFH +YWPAFL+SA LPL K+V++HGF+ ++GEK+S
Sbjct: 243 PEDGNGGRTEFWPADLHVIGKDITRFHTVYWPAFLMSAGLPLCKRVYAHGFLFNRGEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNVIDP  +++  G+D LRYFL+RE+  G+DG Y  DG+  R N++LAN +GNL  R
Sbjct: 303 KSVGNVIDPFALVDTYGLDRLRYFLLREVPFGQDGNYSHDGIVNRTNSELANDLGNLAQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K  +G +P PGAFTE+DE IL     +L + RE ++ Q +H+ LA +I +VS+ 
Sbjct: 363 SLSMVAKHCEGRVPDPGAFTEADELILKAAGDLLAQCREAVEKQQLHQVLAAIIGVVSQA 422

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  ++PW L+KT+ DR  TVLYVT EV+R +AILLQ F P+ A K+ DIL V +++R
Sbjct: 423 NRYFAGEEPWALRKTDFDRMQTVLYVTAEVLRTVAILLQPFTPESAGKLLDILGVQEDDR 482

Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            F  L +  RL PG  L     PIFPRF+
Sbjct: 483 GFDELTKGTRLAPGASLPAP-KPIFPRFV 510


>gi|294852413|ref|ZP_06793086.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294821002|gb|EFG38001.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 544

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 278/508 (54%), Positives = 375/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 32  REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 92  KEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 152 YAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENN 211

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
             FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 212 LGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 271

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 272 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 330

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 331 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 390

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 391 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 450

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 451 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 510

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+FPR++
Sbjct: 511 RQFADVLASPLAGGTDLPAPQPVFPRYV 538


>gi|209885248|ref|YP_002289105.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873444|gb|ACI93240.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 523

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 280/508 (55%), Positives = 372/508 (73%), Gaps = 2/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI+TAIAYPN  PHIGHAYE I  D LARF RLDG+DV F TGTDEHG K+ + AQ
Sbjct: 9   RSRYYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGMDVFFLTGTDEHGLKMIQTAQ 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T      +N+  F+DM   L+IS+D FIRT+E  HHD+ + +W++++  GDIY   
Sbjct: 69  KEGMTPAELATRNAARFKDMDRRLNISFDRFIRTSEVAHHDSTQEIWRRMAANGDIYLSS 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL+ YE H
Sbjct: 129 YAGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLALYEQH 188

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV+SFVK GLKDLS+SR TFDWG+K+PDDP+++MYVW+DALTNY+T   
Sbjct: 189 PEFIGPDVRRNEVVSFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWVDALTNYITGIN 248

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D +  K+WPAD+HVIGKDI+RFHA+YWPAFL+SA + +PK+V++HGF+ ++GEK+
Sbjct: 249 FPDEAD-ANWKYWPADVHVIGKDIIRFHAVYWPAFLMSAGIAVPKRVYAHGFLFNRGEKM 307

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP E+  + GVD LRYFL+RE+  G+DG Y+ + +  R NADLAN +GNL  
Sbjct: 308 SKSVGNVVDPFELANQYGVDQLRYFLLREVPFGQDGNYNHEAIVARTNADLANDLGNLAQ 367

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K + G++P PGAF+++D++IL+    +L + RE M  Q IH AL ++ ++V+E
Sbjct: 368 RSLSMIGKQHGGIVPEPGAFSDADKAILAQADAMLAQTREAMATQQIHVALNEIWTVVAE 427

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P    K+ D L +A E 
Sbjct: 428 ANRYFAGEAPWSLAKTDPARQKTVLYVTAEVVRQIAILAQPAMPGAMTKMLDSLAIAPEA 487

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F SL  R+KPG  L     P+FPR++
Sbjct: 488 RYFASLATRIKPGTQLPPP-APVFPRYV 514


>gi|300023246|ref|YP_003755857.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525067|gb|ADJ23536.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 520

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 284/510 (55%), Positives = 369/510 (72%), Gaps = 3/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAI+YPN  PHIGHAYE I  DV+ARF RLDG DV F TGTDEHG K+ + A+
Sbjct: 2   REKFYITTAISYPNGVPHIGHAYEAIATDVIARFERLDGKDVFFLTGTDEHGLKMKQTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+NS  F +M   L +S DDFIRTTE+RH+D C  LW+++   GDI+K  
Sbjct: 62  REGVTPRELADRNSARFIEMVKTLGLSNDDFIRTTEQRHYDACAELWRRMEKAGDIFKRP 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDE YY + E       ++  A   PV+W EEE YFFRLSAYQDKLL++YE++
Sbjct: 122 YGGWYSVRDETYYKESETEVREGQRFATATGTPVEWNEEETYFFRLSAYQDKLLAHYEAN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP ERRNEV+SFVK GL+DLS+SR T DWGI +PD P ++MYVWIDAL NY+T TG
Sbjct: 182 PDFILPAERRNEVVSFVKMGLEDLSISRTTLDWGIPVPDAPGHVMYVWIDALNNYVTATG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            L +P GS+A +WPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VFSHGF+L+KGEK+
Sbjct: 242 LLTDPQGSRAHYWPANVHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFSHGFVLNKGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP ++++  G DALRYF +RE+  G+DG Y  + +  R+NADLAN +GNL  
Sbjct: 302 SKSVGNVVDPFDLVKAYGRDALRYFFLREVMFGQDGNYSAEAIANRINADLANNLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ DG IP PGAF+  D +IL+    + +  R  M  Q I + L  V ++V+E
Sbjct: 362 RSLSMIFKNCDGAIPQPGAFSAEDTAILNATDALYEAARGEMDRQAITKYLDAVWAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF A++PW  KK +P R +T+LYVT E +RQ AIL Q  +P+ A K+ D+L V  E 
Sbjct: 422 ANRYFAAEEPWAKKKADPARMATILYVTAECVRQFAILAQPVMPESAAKLLDLLAVPAEA 481

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           R F SL    RLK G  + +    +FPR++
Sbjct: 482 RTFASLGSAGRLKAGTAIPEP-QGVFPRYV 510


>gi|254689226|ref|ZP_05152480.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256257476|ref|ZP_05463012.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754731|ref|ZP_05867079.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883752|ref|ZP_05895366.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248320|ref|ZP_06932038.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674839|gb|EEX61660.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873280|gb|EEX80349.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175489|gb|EFH34836.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 515

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 277/508 (54%), Positives = 374/508 (73%), Gaps = 1/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A+
Sbjct: 3   REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG 
Sbjct: 63  KEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    ADG  Y     PV+W+EEE YFFRLSAYQDKLL  YE++
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADGVRYGPPGTPVEWVEEESYFFRLSAYQDKLLDLYENN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+E
Sbjct: 362 RSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  + 
Sbjct: 422 ANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADK 481

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F  +      G        P+ PR++
Sbjct: 482 RQFADVLASPLAGGTDLPAPQPVLPRYV 509


>gi|218674615|ref|ZP_03524284.1| methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 483

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 276/480 (57%), Positives = 371/480 (77%), Gaps = 3/480 (0%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ RLDG DV F TGTDEHGQK+ + A+  G+T +   D+NS  F+ MA +L+ S DD
Sbjct: 1   MARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGITAQELADRNSGEFQAMAKLLNASNDD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           FIRTT++RHH+T R +WK ++D GDIYK  Y+GWYS+RDEAYY ++E    ADG  Y  Q
Sbjct: 61  FIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWYSVRDEAYYQENETELRADGVRYGPQ 120

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             PV+W+EE  YFF+LS YQ+KLL++YE++P+FI P ERRNEVISFVKSGLKDLS+SR T
Sbjct: 121 GTPVEWVEEASYFFKLSEYQEKLLAHYEANPDFIGPAERRNEVISFVKSGLKDLSVSRTT 180

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           FDWGIK+P+DP ++MYVW+DALTNY+T TGY+++ DG +AK+WPAD+H+IGKDI+RFHA+
Sbjct: 181 FDWGIKVPNDPSHVMYVWVDALTNYITATGYIEDRDGPRAKYWPADVHIIGKDIIRFHAV 240

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           YWPAFL+SA LPLPK+VF+HGF+L+KGEK+SKSLGNV+DP+ ++   G+D +RYF +RE+
Sbjct: 241 YWPAFLMSAKLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREV 300

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           + G+DG Y ++ +  R+N+DLANGIGNL SRS+SMI+K+ DG IP  GA T+ D+++L+ 
Sbjct: 301 SFGQDGSYSEEAIGTRINSDLANGIGNLASRSLSMIVKNCDGKIPECGALTDEDKAMLAQ 360

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +    RE+M  Q IHRALA +I++VSE DRYF  Q PW LKKT+P R  TVLYVT E
Sbjct: 361 ADALHTSTREDMGKQQIHRALASIIAVVSETDRYFAGQAPWALKKTDPARMGTVLYVTAE 420

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           V+RQ+AILLQ F+P+ + K+ D++    + R F +L +  RL  G  L     P+FPR++
Sbjct: 421 VVRQIAILLQPFMPESSGKLLDLVAAPADKRDFAALGEAGRLIAGTPLEAP-TPVFPRYV 479


>gi|328543900|ref|YP_004304009.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
 gi|326413644|gb|ADZ70707.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 518

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/513 (55%), Positives = 366/513 (71%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K YI+TAI+YPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTARPKYYITTAISYPNGAPHIGHAYEAIATDAMARFQRLDGKDVYFLTGTDEHGQKMLQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +   D+NS  FRDM   L  + DDFIRT+E RHH + + +W++++  GDIY
Sbjct: 61  TAKKEGISVRELADRNSARFRDMVAALGCTNDDFIRTSEPRHHRSSQEIWRRMAANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  YSGWYS+RDEAYY + E    ADG  Y  Q +PV+W+EEE YFFRLSAYQD+LL++Y
Sbjct: 121 KDSYSGWYSVRDEAYYQEGETELRADGVRYGPQGSPVEWVEEESYFFRLSAYQDRLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNE++SFVK GLKDLS+SR TFDWGI +P D  ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEIVSFVKRGLKDLSVSRTTFDWGIPVPGDEAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D     +WPAD H+IGKDI+RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++G
Sbjct: 241 GVGFPDE-DDPLWSYWPADAHIIGKDIIRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP  +IE  G+D  RYF +RE+  G+DG Y  + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNVIDPFNLIEHYGLDQTRYFFLREVPFGQDGNYSHEAIVGRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG++P PGA T  DE+IL     +L   R     Q IH+ALA V + 
Sbjct: 360 LAQRSLSMIAKNCDGVLPAPGALTPEDEAILGQADVMLDTCRAAFARQEIHQALACVWAC 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF AQ+PW L+K++P R  TVLYVT EVIRQ+AIL Q   P  A  + D L VA
Sbjct: 420 VAEANRYFAAQEPWALRKSDPARMGTVLYVTAEVIRQIAILAQPVTPNAAALLLDNLGVA 479

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            +NR F  L    RL  G  + K   P FPR++
Sbjct: 480 ADNRVFARLGAAGRLAAGVAIPKPV-PAFPRYV 511


>gi|192291492|ref|YP_001992097.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192285241|gb|ACF01622.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 514

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 277/511 (54%), Positives = 369/511 (72%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T      +N+  FR+M D L +SYD FIRT+E++HH + + +WK++ DKGDIY
Sbjct: 61  TAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVKSGLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY++
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIS 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D +   +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDEND-ANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++M+ K  +G +P  GAF+E+D +IL++   ++ + R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMVAKQCEGKVPEHGAFSENDSAILAMADGMIAQARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ DIL +A
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +L  R+ PG  L     PIFPR++
Sbjct: 480 EGQRDFAALATRIVPGTPLPAP-APIFPRYV 509


>gi|110633935|ref|YP_674143.1| methionyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284919|gb|ABG62978.1| methionyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 517

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 276/510 (54%), Positives = 364/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE  YI+TAI+YPN +PHIGHAYE+I  D LARF R DG DV+F TGTDEHG K+ + A+
Sbjct: 3   RETFYITTAISYPNGRPHIGHAYELIATDALARFQRCDGKDVMFLTGTDEHGIKMLQTAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     D+N+  F+ MA +L+ S DDFIRTTE+RH    + +WK ++D+GDIY G 
Sbjct: 63  KEGITAGELADRNAPEFQRMAKLLNASNDDFIRTTEERHRTASQAIWKAMADRGDIYLGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+RDEAYY +DE   G DG  Y  Q  PV+W+EEE YFFRLSAYQ++LL  YE +
Sbjct: 123 YSGWYSVRDEAYYGEDETRVGEDGVRYGPQGTPVEWVEEESYFFRLSAYQERLLKLYEEN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P ERRNE++SFV+SGL+DLS+SR TFDWG+ +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PDFIGPAERRNEIVSFVRSGLRDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITALG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  + ++WPAD+H+IGKDI+RFHAIYWPAFL+SA + LPK+VF HGF+ ++GEK+
Sbjct: 243 YPDQ-DAERWRYWPADVHIIGKDIIRFHAIYWPAFLMSAGIALPKRVFGHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP  +IE  G+D +RYF +RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 302 SKSVGNVIDPFTMIEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ DG +P  G  + +D +IL      L   R  M  Q IH ALA +  +V+E
Sbjct: 362 RSLSMIAKNCDGKVPARGELSAADRAILDQAEAALATARGAMGRQAIHAALAAIFDVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF AQ+PW L+KT+P R  TVLY T E +R++AIL Q F+P  A K+ D+L V  + 
Sbjct: 422 ANRYFAAQEPWALRKTDPARMETVLYTTAETLRRIAILCQPFIPSSAEKLLDLLSVPQDR 481

Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPRFL 511
           R F  + +   L PG  L     P+FPR++
Sbjct: 482 RGFADVGETAMLAPGTPLPAP-QPVFPRYV 510


>gi|260459472|ref|ZP_05807727.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259035026|gb|EEW36282.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 517

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 280/510 (54%), Positives = 367/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+TAI+YPN +PHIGHAYE+I  D LARF RLDG  V F TGTDEHG K+ + A+
Sbjct: 3   RDTFYITTAISYPNGKPHIGHAYEVIATDALARFQRLDGKQVFFLTGTDEHGIKMLQTAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +   D+NS +F+ MA  L+ S DDFIRTTE+RH+ + + +WK +   GDIYKG 
Sbjct: 63  REGISARELADRNSADFKRMAAALNASNDDFIRTTEERHYASSQAIWKAMDANGDIYKGG 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY ++E    AD   Y  Q  PV+W+EEE YFFRLSAYQDKL++ YES 
Sbjct: 123 YAGWYSVRDEAYYGEEETEVRADNVRYGPQGTPVEWVEEESYFFRLSAYQDKLIALYESQ 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P ERRNEV+SFVKSGLKDLS+SR TFDWG+ +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PDFIGPAERRNEVMSFVKSGLKDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D  D  K +FWPAD H+IGKDI+RFHA+YWPAFL+SA +PLPK+VF HGF+ ++GEK+
Sbjct: 243 YPDEKD-EKWRFWPADAHIIGKDIVRFHAVYWPAFLMSAGIPLPKRVFGHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP  ++E  G+D +RYF +RE+  G+DG Y  + +  R NADLANG+GNL  
Sbjct: 302 SKSVGNVIDPFTMVEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANGLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+  G++P  G  TE+D +IL      L   R+ M  Q IH ALA +  +V+E
Sbjct: 362 RSLSMIAKNCGGVVPKRGDLTEADSAILDQAVAALATARKAMAGQGIHLALAAIFDVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            DRYF  Q PW LKKT+P+R  TVL+ T EV+R++ +L Q FVP  A K+ D+L V  + 
Sbjct: 422 ADRYFAGQAPWALKKTDPERMETVLWTTAEVVRRVTVLCQPFVPGSAAKLLDLLAVPADK 481

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
           R F+ +  D  L PG  L    + +FPR++
Sbjct: 482 RDFEHVHADHALVPGTAL-PVPEGVFPRYV 510


>gi|39935844|ref|NP_948120.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|39649698|emb|CAE28219.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 514

 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 277/511 (54%), Positives = 368/511 (72%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T      +N+  FR+M D L +SYD FIRT+E++HH + + +WK++ DKGDIY
Sbjct: 61  TAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVKSGLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY++
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIS 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D     +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDEND-KNWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++M+ K  +G +P  GAF+E+D +IL++   ++ + R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMVAKQCEGKVPEHGAFSETDSAILAMADAMITQARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ DIL +A
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +L  R+ PG  L     PIFPR++
Sbjct: 480 EGQRDFAALATRIVPGTPLPAP-APIFPRYV 509


>gi|316934061|ref|YP_004109043.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601775|gb|ADU44310.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 514

 Score =  602 bits (1551), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 277/511 (54%), Positives = 365/511 (71%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAI+YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T      +N+  FRDM D   ISYD FIRT+E++HH + + +WK++   GDIY
Sbjct: 61  TAQREGMTPAELAARNAGRFRDMDDRFGISYDRFIRTSEEQHHASVQEVWKRMQASGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY +DE   G DG     Q  PV+W+EE+ YFF+LSAYQD+LL  Y
Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGEDGVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T
Sbjct: 181 EEQPDFIGPDARRNEVISFVKGGLKDLSVSRTTFDWGVKVPSDPEHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D     +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDESD-KNWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++MI K  DG +P  GAF+E+D +IL++   ++ + R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMIAKQCDGKVPEHGAFSENDSAILAMADGMIAQARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ DIL +A
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + R F +L  R+ PG  L     PIFPR++
Sbjct: 480 ADARDFAALPTRIVPGTPLPAP-APIFPRYV 509


>gi|115524873|ref|YP_781784.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518820|gb|ABJ06804.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 518

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 275/508 (54%), Positives = 367/508 (72%), Gaps = 2/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  Y++TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ
Sbjct: 8   RDTYYLTTAIAYPNGVPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQ 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T      +N+  FR+M D L++SYD FIRTTE++HH + + +W+++   GDIY   
Sbjct: 68  KEGLTPHDLATRNAGRFREMDDKLNVSYDRFIRTTEEQHHRSSQEIWRRMLKNGDIYLDS 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE   G D      Q +PV+W+EE+ YFF+LSAYQDKLL  Y   
Sbjct: 128 YAGWYSVRDEAYYAEDETTVGEDKVRRGPQGSPVEWVEEKSYFFKLSAYQDKLLKLYADQ 187

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  R+NEV+SFVK GLKDLS+SR TFDWGIK+PD+  ++MYVW+DALTNY+T  G
Sbjct: 188 PDFIGPDSRKNEVVSFVKGGLKDLSVSRTTFDWGIKVPDEEGHVMYVWVDALTNYITGVG 247

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D    ++WPADLHVIGKDI+RFHA+YWPAFL+SA +P+ K+VF+HGF+ ++GEK+
Sbjct: 248 FPDETD-PNWRYWPADLHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVFAHGFLFNRGEKM 306

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP  + E+ GVD LRYFL+RE+  G+DG Y+ + +  R+NADLAN +GNL  
Sbjct: 307 SKSVGNVVDPFNLAEQYGVDQLRYFLLREVQFGQDGSYNHEAIVNRINADLANDLGNLAQ 366

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K Y  ++P PGAF+++D+++L+    +L+  R  M  Q IH+AL  V ++V E
Sbjct: 367 RSLSMIAKQYASIVPEPGAFSDNDKAMLAQADGMLELARTAMATQQIHQALNAVWAVVGE 426

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EVIRQ+AIL Q  +P  A K+ DIL +  + 
Sbjct: 427 ANRYFAGEAPWALAKTDPPRQKTVLYVTAEVIRQVAILAQPAIPASAAKLLDILAIPADQ 486

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F +L  R+ PG  +     P+FPR++
Sbjct: 487 RDFAALPNRITPGTQMPAP-APVFPRYV 513


>gi|299133888|ref|ZP_07027082.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591724|gb|EFI51925.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 523

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 267/508 (52%), Positives = 366/508 (72%), Gaps = 2/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ + AQ
Sbjct: 9   RSRFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQTAQ 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T      +N+  F++M   L+IS+D FIRT+E  HH + + +W++++  GDIY   
Sbjct: 69  KENMTPHELATRNAGRFKEMDQRLNISFDRFIRTSEPAHHASTQEIWRRMAASGDIYLDS 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL  YES 
Sbjct: 129 YAGWYSVRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLYESQ 188

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE++SFVK GLKDLS+SR TFDWG+K+P+DP+++MYVW+DALTNY+T  G
Sbjct: 189 PDFIGPDSRRNEIVSFVKGGLKDLSISRTTFDWGVKVPNDPEHVMYVWVDALTNYITGIG 248

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D    +  K+WPAD+H+IGKDI+RFHA+YWPAFL++A +P+PK+V++HGF+ ++GEK+
Sbjct: 249 FPDE-KAANWKYWPADVHIIGKDIIRFHAVYWPAFLMAAGIPVPKRVYAHGFLFNRGEKM 307

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP  + ++ GVD +RYF +RE+  G+DG Y+ + +  R NADLAN +GNL  
Sbjct: 308 SKSVGNVVDPFVLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARTNADLANDLGNLAQ 367

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K + G++P PG F+++D++IL+    +L + R+ M  Q IH AL  + ++V+E
Sbjct: 368 RSLSMIGKQHGGIVPEPGTFSDNDKAILAQADAMLAQARDAMATQQIHVALNAIWAVVAE 427

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P+   K+ DIL V  E 
Sbjct: 428 ANRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPEAMTKMLDILAVPAET 487

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F +L  R+ PG  L     P+FPR++
Sbjct: 488 RDFAALANRIAPGTQLPPP-TPVFPRYV 514


>gi|90417681|ref|ZP_01225593.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337353|gb|EAS51004.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 515

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 272/509 (53%), Positives = 372/509 (73%), Gaps = 5/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y++TAI+YPN +PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ ++A+ 
Sbjct: 3   ERFYLTTAISYPNGRPHIGHAYEFIATDALARFKRLDGYDVFFLTGTDEHGIKMLQSARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++      +NS  F  MA +L  + DDFIRT+E RH    + +W K++  GD+YK  Y
Sbjct: 63  QGISPAELARRNSAEFEAMAALLGGTNDDFIRTSEDRHVAASQAIWTKMAAAGDVYKDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE     DG+ Y  Q +PV+W+ EE YFF+LS +QD+LL+ YE +P
Sbjct: 123 SGWYSVRDEAYYGEDETELREDGKRYGPQGSPVEWVAEESYFFKLSEFQDRLLALYEDNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P ERRNEV+SFV+SGL+DLS+SR TFDWGI +P D +++MYVW+DALTNYLT TG+
Sbjct: 183 DFIGPAERRNEVMSFVRSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTATGF 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +  +G ++ +WPADLHVIGKDI+RFH +YWPAFL+SA LP+P++V++HGF+ ++GEK+S
Sbjct: 243 PE--EGERSAYWPADLHVIGKDIVRFHTVYWPAFLMSAGLPVPRRVYAHGFLFNRGEKMS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNVIDP  +++  G+D LRYFL+RE+  G+DG Y  + +  R N++LAN +GNL  R
Sbjct: 301 KSVGNVIDPAALVDVYGLDRLRYFLLREVPFGQDGNYSHEAIVNRTNSELANDLGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K     +PTPGAF E+D +IL+  + +L ++R  +  Q +H  LA +I++VSE 
Sbjct: 361 SLSMVGKHCGAKVPTPGAFIEADTAILTAANDLLPKVRTMIDRQELHGVLAAIIAVVSEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  Q+PW L+K++P R  TVL+VT E +R++AILLQ FVP+ A K+ DIL V  + R
Sbjct: 421 NRYFAGQEPWALRKSDPARMETVLFVTAEFLRRVAILLQPFVPESAGKLLDILGVGPDAR 480

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D RL PG  L     PIFPRF+
Sbjct: 481 TFNELTPDVRLAPGADLPAP-QPIFPRFV 508


>gi|86749798|ref|YP_486294.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572826|gb|ABD07383.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 514

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 274/511 (53%), Positives = 362/511 (70%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAI+YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  GV T V   +N+  FRDM D   ISYD FIRT+E++HH + + +WK++   GDIY
Sbjct: 61  TAQKEGVETHVLAARNAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE  YFF+LSAYQDKLL  Y
Sbjct: 121 LDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWVEERSYFFKLSAYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D +   +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDESD-ANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++M+ K  D  +P  G F+E+D+++L++   ++   R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIARPAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+ IL Q  +P  A K+ DIL VA
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +L  R+ PG  L     PIFPR++
Sbjct: 480 EGARDFAALPTRIVPGTPLPAP-APIFPRYV 509


>gi|74420524|gb|ABA04723.1| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 692

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 269/509 (52%), Positives = 363/509 (71%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ 
Sbjct: 181 DTFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQR 240

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++      +N+   R + + LDIS+D FIRT+E  HH + + +WK+++  GDIY   Y
Sbjct: 241 ENISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLSNY 300

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAY+D+LL+ YES P
Sbjct: 301 SGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEP 360

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T  G+
Sbjct: 361 DFIGPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGF 420

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D S  +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+S
Sbjct: 421 PDE-DESNWRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMS 479

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP  +  + GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN  GNL  R
Sbjct: 480 KSVGNVVDPFSLAAQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQR 539

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K + G++P PG F+++D++IL+    ++   RE M  Q IH+AL  + S+V+E 
Sbjct: 540 SLSMIAKQHGGVLPEPGDFSDADKAILAQADGMIAIAREAMNTQQIHQALNAIWSVVAEA 599

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P    K+ DIL +  + R
Sbjct: 600 NRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPAACAKLLDILGIPADER 659

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D R++PG  L     P+FPR++
Sbjct: 660 NFAMLGGDIRIRPGSALPAPV-PVFPRYV 687


>gi|91977188|ref|YP_569847.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683644|gb|ABE39946.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 514

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 270/511 (52%), Positives = 366/511 (71%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAI+YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+ T V   +N+  FRDM D   +SYD FIRT+E++HH + + +WK++   GDIY
Sbjct: 61  TAQKEGIETHVLAARNAGRFRDMDDRFGVSYDRFIRTSEEQHHRSVQEVWKRMQANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y+GWYS+RDEAYY +DE   G D      Q +PV+W+EE+ YFF+LSAYQD+LL  Y
Sbjct: 121 LDSYAGWYSVRDEAYYAEDETIVGEDNVRRGPQGSPVEWVEEKSYFFKLSAYQDRLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVK GLKDLS+SR TFDWG+++P DP+++MYVW+DALTNY+T
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVEVPGDPEHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D +  ++WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDETD-ANWRYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++MI K  +  +P  G F+++D+++L++   ++   R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMIAKQCEAKVPEHGDFSDADKAMLAMADGMIAPARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+ IL Q  +P  A K+ DIL VA
Sbjct: 420 VAEANRYFAGEAPWALAKTDPPRQKTVLYVTAEVLRQIGILAQPAIPGSATKLLDILGVA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + R F +L  R+KPG  L     PIFPR++
Sbjct: 480 ADARDFAALATRIKPGTPLPAP-APIFPRYV 509


>gi|254469852|ref|ZP_05083257.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961687|gb|EEA96882.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 517

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 280/513 (54%), Positives = 372/513 (72%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+TAI+YPN +PHIGHAYE I  DVLARF RLDG +V F TGTD HGQK+ +
Sbjct: 1   MTEKSPFYITTAISYPNGEPHIGHAYEAIATDVLARFQRLDGREVHFLTGTDVHGQKMLQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++     D+NS+ FR+M ++L  S DDFI+T E+RH+ +C+ +W+K++D GDIY
Sbjct: 61  TAVKEGMSPSDLADKNSKLFREMVEMLGCSNDDFIQTNEERHYKSCQAIWQKMADAGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY + E     DG  Y  Q  PV+W+EEE YFFRLSAY+DKL+  Y
Sbjct: 121 KDSYAGWYSVRDEAYYQEGETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYEDKLIELY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNEV+SFVK GLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T
Sbjct: 181 EKNPDFIGPNARRNEVMSFVKGGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D  DG  AKFWPA+ H+IGKDI+RFHA+YWPAFL+SA +PLP++VF+HGF+ + G
Sbjct: 241 ALGYPDM-DGDMAKFWPANAHIIGKDIIRFHAVYWPAFLMSAGVPLPERVFAHGFLFNSG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNVI P +++E  G+D +RYF +RE+  G+DG Y+ + +  R+NADLAN IGN
Sbjct: 300 EKMSKSLGNVIAPRDLVETYGLDQIRYFFLREVPFGQDGNYNHEAMVNRINADLANDIGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PG F+  D++IL     +L++ R  M  Q IH ALA + S 
Sbjct: 360 LAQRSLSMIFKNCEGKLPVPGEFSADDKAILQQADEMLEKCRGFMAKQEIHHALACIWST 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +Q+PW LKKT P+R  TVLY T E+IRQ+ IL Q  +P  A K+ D+L ++
Sbjct: 420 VGEANRYFASQEPWALKKTEPERMGTVLYTTAEIIRQVGILAQPVMPTSAGKLLDLLVLS 479

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           D+ R F  L +  RL+ G  L K    +FPR++
Sbjct: 480 DDERSFAELGEAGRLQGGRELPKP-QGVFPRYV 511


>gi|85715531|ref|ZP_01046512.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
 gi|85697726|gb|EAQ35602.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
          Length = 695

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 268/507 (52%), Positives = 362/507 (71%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ   
Sbjct: 186 FYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQREN 245

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++      +N+   R + + L IS+D FIRT+E  HH + + +WK++++ GDIY   YSG
Sbjct: 246 ISALELATRNAELLRKLDETLHISFDRFIRTSESAHHRSVQEIWKRMAENGDIYLSNYSG 305

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+L++YQD+LL+ YES P+F
Sbjct: 306 WYSVRDEAYYAEDETIVGEDNVRRGPQGTPVEWVEEKSYFFKLASYQDRLLALYESEPDF 365

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFVK GLKDLS+SR  FDWGIK+PDDP+++MYVW+DALTNY+T  G+  
Sbjct: 366 IGPDSRRNEVVSFVKGGLKDLSISRTNFDWGIKVPDDPEHVMYVWVDALTNYITGVGF-P 424

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           N D S  +FWPA +H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+SKS
Sbjct: 425 NEDESNWRFWPAGVHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMSKS 484

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  +  + GVD +RYF +RE+  G DG Y+ + +  R+NADLAN  GNL  RS+
Sbjct: 485 VGNVVDPFSLAAQYGVDQMRYFFLREVPFGHDGSYNHEAIVARINADLANDFGNLAQRSL 544

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K + G++P PG F++SD++IL+    ++   RE M+ Q IH+AL  + ++V+E +R
Sbjct: 545 SMIAKQHGGVLPEPGDFSDSDKAILAQADGMIAVAREAMKTQQIHQALNAIWAVVAEANR 604

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P+   K+ DIL +  + R F
Sbjct: 605 YFAGEAPWVLAKTDPARQRTVLYVTAEVVRQIAILAQPAMPEACAKMLDILGIPTDERNF 664

Query: 487 QSLDQ--RLKPGFMLHKTFDPIFPRFL 511
             L    R+KPG ML     P+FPR++
Sbjct: 665 AMLGGHVRIKPGTMLPPPV-PVFPRYV 690


>gi|162139845|ref|YP_318075.2| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 544

 Score =  588 bits (1515), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 269/509 (52%), Positives = 363/509 (71%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ 
Sbjct: 33  DTFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQR 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++      +N+   R + + LDIS+D FIRT+E  HH + + +WK+++  GDIY   Y
Sbjct: 93  ENISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLSNY 152

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAY+D+LL+ YES P
Sbjct: 153 SGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEP 212

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T  G+
Sbjct: 213 DFIGPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGF 272

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D S  +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+S
Sbjct: 273 PDE-DESNWRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMS 331

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP  +  + GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN  GNL  R
Sbjct: 332 KSVGNVVDPFSLAAQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQR 391

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K + G++P PG F+++D++IL+    ++   RE M  Q IH+AL  + S+V+E 
Sbjct: 392 SLSMIAKQHGGVLPEPGDFSDADKAILAQADGMIAIAREAMNTQQIHQALNAIWSVVAEA 451

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P    K+ DIL +  + R
Sbjct: 452 NRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPAACAKLLDILGIPADER 511

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D R++PG  L     P+FPR++
Sbjct: 512 NFAMLGGDIRIRPGSALPAPV-PVFPRYV 539


>gi|154248247|ref|YP_001419205.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154162332|gb|ABS69548.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 550

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 272/513 (53%), Positives = 363/513 (70%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ +
Sbjct: 33  MSAKPPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AGVT +  + +N   F  M +  ++S DDFIRTT++RHH + + +W K++  GDIY
Sbjct: 93  TAQKAGVTPRELLARNVPRFEAMVEAFNLSIDDFIRTTQERHHASSQAIWAKMAANGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY +DE      G     Q  PV+W+EEE YFFRLSAYQD+LL+YY
Sbjct: 153 KSTYAGWYSVRDEAYYAEDETQLNEQGIRLGPQGTPVEWVEEESYFFRLSAYQDRLLAYY 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P FI+P  RRNEV+SFV  GL DLS+SR TFDWGI +P D ++IMYVW+DALTNY+T
Sbjct: 213 AENPGFIMPEARRNEVVSFVSGGLTDLSISRTTFDWGIPVPGDDKHIMYVWVDALTNYIT 272

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       +FWPA+LHVIGKDI+RFHA+YWPAFL SA L  PK+VF HGF+ ++G
Sbjct: 273 ALGYPDTEAELFKRFWPANLHVIGKDIIRFHAVYWPAFLWSAGLEAPKRVFGHGFLFNRG 332

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP ++    GVDA+RYF +RE++ G+DG Y  + +  R+NADLAN +GN
Sbjct: 333 EKMSKSVGNVIDPFDLAATYGVDAIRYFFLREVSFGQDGSYSHEAIVARMNADLANDLGN 392

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG++P PG  +  DE+IL++   +L++ RE M+ Q IH  LA V ++
Sbjct: 393 LAQRSLSMIAKNLDGVVPQPGPLSPEDEAILALADGMLEKSREAMEGQAIHHYLAAVWNV 452

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF AQ PW L+KT+P R +TVL+VT E+IR++ IL+Q  +P+ A ++ D++ V 
Sbjct: 453 VAEANRYFAAQAPWALRKTDPARMATVLWVTAELIREVGILVQPVMPESAARLLDLVVVP 512

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            + R F  L    RL  G +L      +FPR++
Sbjct: 513 ADERGFDRLGAGHRLPAGRVLPAPVG-VFPRYV 544


>gi|146340771|ref|YP_001205819.1| methionyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193577|emb|CAL77594.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Bradyrhizobium sp. ORS278]
          Length = 705

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 266/507 (52%), Positives = 363/507 (71%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAYPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG K+ + AQN G
Sbjct: 196 FYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGTDEHGLKMVQTAQNEG 255

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T      +N+  FR+M + L++S+D FIRTTE  HH + + +W ++ + GDIY   YSG
Sbjct: 256 LTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSG 315

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY ++E   G D      Q  PV+W+EE+ YFFRLSAYQDKLL+ YE+ P+F
Sbjct: 316 WYSVRDEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDKLLALYENQPDF 375

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ SFV+ GLKDLS+SR TFDWG+++P D +++MYVW+DALTNY+T  G+ D
Sbjct: 376 IGPDARRNEITSFVRGGLKDLSISRTTFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPD 435

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D +  KFWPAD+HVIGKDI+RFHA+YWPAFL+SA +P+PK+V++HGF+ ++GEK+SKS
Sbjct: 436 END-ANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAHGFLFNRGEKMSKS 494

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  + ++ GVD LRYF +RE+  G+DG Y+ + +  R+NADLAN +GNL  RS+
Sbjct: 495 VGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 554

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K + G++P PG F+ +D++IL+    ++   R+ M  Q IH+ L  V S+V+E +R
Sbjct: 555 SMITKQFGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANR 614

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EVIRQ+AIL Q  +P  + K+ D L + ++ R F
Sbjct: 615 YFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPAASAKLLDSLGIPEDERSF 674

Query: 487 QSL--DQRLKPGFMLHKTFDPIFPRFL 511
             L  + R+ PG  L      +FPR++
Sbjct: 675 ARLGGEVRIAPGTQLPAP-QAVFPRYI 700


>gi|254563518|ref|YP_003070613.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254270796|emb|CAX26801.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 522

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 279/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + + + PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D      A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDA-KAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD D +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHDAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+    + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
              R   F   + RL+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEHRLQGGTALPAP-APIFPRF 515


>gi|163853584|ref|YP_001641627.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665189|gb|ABY32556.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 522

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 278/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + + + PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D      A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDA-QAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+    + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
              R   F   + RL+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEHRLQGGTALPAP-APIFPRF 515


>gi|92117538|ref|YP_577267.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800432|gb|ABE62807.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 659

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 267/507 (52%), Positives = 359/507 (70%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI YPN  PHIGHAYE I  DVLARF RLDG DV F TGTDEHGQK+ + AQ   
Sbjct: 150 FYITTAIVYPNGAPHIGHAYEAIATDVLARFQRLDGKDVFFLTGTDEHGQKMVQTAQKEN 209

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++      +N+   R + + L+IS++ FIRT+E  HH + + +WK+++  GDIY   Y+G
Sbjct: 210 ISALELATRNAELLRKLDETLNISFNRFIRTSEPAHHHSVQEIWKRMAANGDIYLSSYAG 269

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQD+LL+ YES P+F
Sbjct: 270 WYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLALYESQPDF 329

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEVISFVK GLKDLS+SR TFDWG+K+PDDP+++MYVW+DALTNY+T  G+ D
Sbjct: 330 IGPDSRRNEVISFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWVDALTNYITGVGFPD 389

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    ++WPADLH+IGKDI+RFHA+YWPAFL+SA +PL K+V++HGF+ ++GEK+SKS
Sbjct: 390 END-KDWRYWPADLHIIGKDIIRFHAVYWPAFLMSAGIPLQKRVYAHGFLFNRGEKMSKS 448

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  +  + GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN  GNL  RS+
Sbjct: 449 VGNVVDPFNLAAQYGVDQVRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQRSL 508

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K +DG +P PG F+++D++IL+    ++   RE M  Q IH+AL  V ++V+E +R
Sbjct: 509 SMIAKQHDGALPEPGDFSDNDKAILAQADGMIAVAREAMNTQQIHQALNAVWAVVAEANR 568

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYV  EV+RQ+AIL Q  +P     + D+L +    R F
Sbjct: 569 YFAGEAPWVLAKTDPARQKTVLYVAAEVVRQIAILAQPAMPASCATMLDLLGIPASERNF 628

Query: 487 QSLDQ--RLKPGFMLHKTFDPIFPRFL 511
             L    R+KPG  L     P+FPR++
Sbjct: 629 AMLGGHVRIKPGTTLPPPV-PVFPRYV 654


>gi|158423799|ref|YP_001525091.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158330688|dbj|BAF88173.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 526

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 277/512 (54%), Positives = 361/512 (70%), Gaps = 1/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ +
Sbjct: 7   MSSKRPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQ 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG+T +  +D+N   F+ M    ++S DDFIRTTE+RH  + + +W++++ KGDIY
Sbjct: 67  TAQKAGLTPRELLDRNVPAFKAMGPAFNLSNDDFIRTTEERHIKSSQAIWERMAAKGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  YSGWYS+RDEAYY +DE            Q  PV+W+EEE YFFRLSAYQ KLL +Y
Sbjct: 127 KSTYSGWYSVRDEAYYAEDETTVNEQNVRLGPQGTPVEWVEEESYFFRLSAYQQKLLDFY 186

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            ++P FI+P  RRNEV+SFV  GL+DLS+SR TFDWGI +P DP +IMYVW+DALTNY+T
Sbjct: 187 AANPGFIMPEARRNEVVSFVSGGLQDLSISRTTFDWGIPVPGDPAHIMYVWVDALTNYIT 246

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       KFWPADLHVIGKDI+RFHA+YWPAFL SA L  PK+VF HGF+ ++G
Sbjct: 247 ALGYPDTDAELFRKFWPADLHVIGKDIIRFHAVYWPAFLWSAGLEPPKRVFGHGFLFNRG 306

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNV+DP  ++E  GVDA RYF +RE++ G+DG Y  + +  R+NADLAN +GN
Sbjct: 307 EKMSKSVGNVVDPFGLVETYGVDATRYFFLREVSFGQDGSYSHEAIVNRMNADLANDLGN 366

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG++P PG  +  DE+IL++   +L++ RE M+ Q IH+ LA V ++
Sbjct: 367 LAQRSLSMISKNLDGVVPEPGPLSPEDEAILALADGMLEKAREAMEVQAIHQYLAAVWAV 426

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF AQ PW L+KT+P R  TVL+ T EVIRQ+AIL Q  +P+ A K+ D+L V 
Sbjct: 427 VAEANRYFAAQAPWALRKTDPKRMETVLWTTAEVIRQVAILAQPVMPESAGKMLDLLVVP 486

Query: 481 DENRCFQSLDQRLK-PGFMLHKTFDPIFPRFL 511
            E R F  L    + PG         +FPR++
Sbjct: 487 AEQRGFDVLGGTFRLPGGTAIPAPTGVFPRYV 518


>gi|148255487|ref|YP_001240072.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407660|gb|ABQ36166.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 722

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 267/507 (52%), Positives = 360/507 (71%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAYPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG K+ + AQN G
Sbjct: 213 FYVTTAIAYPNGNPHIGHAYEAIATDAIARFARLDGKDVFFLTGTDEHGLKMVQTAQNEG 272

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T      +N+  FRDM + L++S+D FIRTTE  HH + + +W ++ + GDIY   Y+G
Sbjct: 273 LTPGELATRNAGRFRDMDERLNVSFDRFIRTTEPAHHKSVQAIWNRMLENGDIYADTYAG 332

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFFRLSAYQD+LL+ YES P+F
Sbjct: 333 WYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDRLLALYESQPDF 392

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ISFVK GLKDLS+SR TFDWG+++P D +++MYVW+DALTNY+T  G+ D
Sbjct: 393 IGPDARRNEIISFVKGGLKDLSISRTTFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPD 452

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D +  K+WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+PK+V++HGF+ ++GEK+SKS
Sbjct: 453 END-ANWKYWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAHGFLFNRGEKMSKS 511

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  + ++ GVD LRYF +RE+  G+DG Y+ + +  R+NADLAN +GNL  RS+
Sbjct: 512 VGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 571

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K   G +P PG F+ +D +IL+    ++   R+ M  Q IH+ L  V S+V+E +R
Sbjct: 572 SMIAKQLGGQLPEPGEFSANDRAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANR 631

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EVIRQ+AIL Q  +P  + K+ D L + ++ R F
Sbjct: 632 YFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPTASAKLLDSLGIPEDERNF 691

Query: 487 QSL--DQRLKPGFMLHKTFDPIFPRFL 511
             L  + R+  G  L      +FPR++
Sbjct: 692 ARLGGEIRIAAGTQLPAP-QAVFPRYI 717


>gi|90424203|ref|YP_532573.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106217|gb|ABD88254.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 522

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 272/510 (53%), Positives = 360/510 (70%), Gaps = 3/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   ++ST I YPN  PHIGHAY  +++D +ARF RLDG DV F TGTDEHG K+ + A 
Sbjct: 9   RPAYFLSTPIFYPNGVPHIGHAYTAMVSDAIARFQRLDGYDVRFLTGTDEHGLKMQQTAI 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     D+NS  FRDM   L+ISYDD+IRTTE RH  +C+ LW  I + GDIY   
Sbjct: 69  AEGLTPLQLADRNSARFRDMMAALNISYDDYIRTTEPRHERSCQALWTAIENNGDIYLDK 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+R EAY+++ E   G DG       +PV+W EEE YFFRLSAYQDKLL  Y   
Sbjct: 129 YAGWYSVRQEAYFDEAETTVGEDGVRREPLGSPVEWTEEETYFFRLSAYQDKLLELYAKV 188

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+LP ER NEV SFVK GL+DLS+SR TFDWGIK+P  P+++MYVWIDALTNY+T  G
Sbjct: 189 PDFVLPRERLNEVASFVKGGLQDLSISRTTFDWGIKVPGAPRHVMYVWIDALTNYITGAG 248

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    S  ++WPA LHVIGKDI+RFHA+YWPAFL+SA + +P++VFSHGF+L++GEK+
Sbjct: 249 YPDVDSDSFKRYWPASLHVIGKDIVRFHAVYWPAFLMSAGVAVPQRVFSHGFLLNRGEKM 308

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP E+ ++ GVD +RYF +RE++ G+DG Y+ + +  R NADLAN +GNL  
Sbjct: 309 SKSVGNVVDPFEMAKQYGVDQMRYFFMREVSFGQDGSYNHEAIVNRTNADLANDLGNLAQ 368

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++MI K   G++P PG F+++D++IL+    +++  R  M  Q IH  L  V ++V+E
Sbjct: 369 RSLTMIGKQLGGVLPEPGDFSDNDKAILAQADAMIELARTAMATQQIHHMLNAVWAVVAE 428

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ D L +A+E 
Sbjct: 429 ANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVAILAQPVMPASAAKLLDSLGIAEEE 488

Query: 484 RCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
           R F  L   +R++PG  L     PIFPR++
Sbjct: 489 RDFTHLGGHERIRPGTPLPAP-APIFPRYV 517


>gi|163760146|ref|ZP_02167229.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282545|gb|EDQ32833.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 514

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/509 (53%), Positives = 363/509 (71%), Gaps = 5/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ YI+T I YPN  PHIGHAY  I  DVLARF RLDG DV F +GTDEHGQK+ + A+ 
Sbjct: 4   ERFYITTPIFYPNGVPHIGHAYTAIATDVLARFQRLDGKDVFFLSGTDEHGQKMQQTAEQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      D+NS  FRDM + LD S DDFIRTTE+RH  + + LWK++   GDIY G Y
Sbjct: 64  EGIKPIALADKNSAVFRDMLERLDCSNDDFIRTTEERHKASVQELWKRMEANGDIYLGKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+R EAY+++ E   G DG       +PV+W+EEE Y+FRLSAY DKLL  +E +P
Sbjct: 124 GGWYSVRQEAYFDEGETTLGEDGIRREPLGSPVEWVEEESYYFRLSAYGDKLLELFEKNP 183

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EF+ P ERRNEV SFVKSGLKDLS+SR TFDWG+ +P + +++MYVW+DALTNY+T  G+
Sbjct: 184 EFVAPAERRNEVASFVKSGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITAAGF 243

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D     K  +WPA +H+IGKDI+RFHA+YWPAFL+SA L LP KVF+HGF+L KGEK+S
Sbjct: 244 PDE-TSEKWNYWPA-IHMIGKDIVRFHAVYWPAFLMSAGLELPAKVFAHGFLLVKGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP  +I+  G+D +RYF +RE+  G+DG Y  + +  R+N+DLANGIGNL SR
Sbjct: 302 KSIGNVVDPFALIDHYGLDQVRYFFMREVPFGQDGSYSPEAIATRINSDLANGIGNLTSR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +SMI K+ DG +P  G  T+ D+++L    +V++  R +M +  IH+AL  +I +V++ 
Sbjct: 362 CLSMINKNCDGKVPECGVLTDPDKAMLETADKVIESARADMADFQIHKALTSIIDVVADG 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           DRYF +Q+PW LKKT+P R  TVLY+T E +RQ++ILL  F+P+ A K+ D++    + R
Sbjct: 422 DRYFASQEPWALKKTDPARMETVLYITAETVRQISILLLPFMPQSAGKLLDLVAAPADKR 481

Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            F +L +  RL PG  + K   PIFPR++
Sbjct: 482 DFAALGETGRLAPGTPIDKP-TPIFPRYV 509


>gi|240141004|ref|YP_002965484.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010981|gb|ACS42207.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 522

 Score =  578 bits (1490), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/512 (54%), Positives = 365/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + + + PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D      A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDA-QAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+  + + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAAALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
              R   F   + RL+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEYRLQGGTALPAP-APIFPRF 515


>gi|218532446|ref|YP_002423262.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218524749|gb|ACK85334.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 522

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 277/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + + + PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETTLGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D      A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDA-QAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+  + + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMITKNCEGAVPEPGAFTEADERLLAAAAALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
              R   F   +  L+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEHSLQGGTALPAP-APIFPRF 515


>gi|319405650|emb|CBI79273.1| Methionyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 513

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 266/510 (52%), Positives = 371/510 (72%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I++D LARF + DG +V F +GTDEHG K+ + AQ
Sbjct: 2   RDIYYITTPIFYPNSAPHIGHAYNAIVSDALARFQKADGKNVFFLSGTDEHGLKMQQTAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  +L+ S +DFIRTTE+RHH  C+ LWKK+  KGDIY GC
Sbjct: 62  MLNMTPQQLADRNSAVFQKMLAMLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R EAYY + +     +G     +  +PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YAGWYSVRQEAYYEEKDTKIDQEGIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+I+FVKSGLKDLS+SR TFDWGI++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDFIGPNERRNEIINFVKSGLKDLSISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTAV 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + D  +  K +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK++F+HGF+L++G K
Sbjct: 242 DFFDE-NSKKRRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIELPKRIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E++E  G+D +RYF +RE+  G+DG Y+ D    R+NADLAN +GNL 
Sbjct: 301 MSKSVGNVVDPFEMVERYGLDQVRYFFLREVPFGQDGSYNHDNFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +  IPTP AF   DE +L    +VL+ +R  M +Q  H AL+ + S+V+
Sbjct: 361 QRSLSMIEKNCNMKIPTPAAFLIQDEQLLKQSLQVLEIVRRTMLDQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF +++PW L+K NP+R STVLY+T+EV+R++ I+L  F+P+ A K+ D L VA+E
Sbjct: 421 DANRYFASEEPWSLRKNNPERFSTVLYITLEVLRRVGIMLLPFIPQSAAKLLDSLAVAEE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D R+K   +L     PIFPR++
Sbjct: 481 DRLLHHISDLRIKEETVLSPPV-PIFPRYI 509


>gi|298291756|ref|YP_003693695.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928267|gb|ADH89076.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 524

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 270/509 (53%), Positives = 358/509 (70%), Gaps = 1/509 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+TAI YPN  PHIGHAYE I AD LARF +LDG DV F TGTDEHG K+A+ A+
Sbjct: 8   KPAFYITTAIDYPNGAPHIGHAYEKIAADALARFKKLDGYDVFFLTGTDEHGLKMAQTAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +  +N+  F++M  +L + YD FIRTT++ H  + + +W+++ + GDIY G 
Sbjct: 68  KQGLTPIEWATKNATRFKEMDALLGVDYDRFIRTTDEDHILSSQAIWQRMVEAGDIYLGA 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+RDEAYY +DE    ADG     Q  PV+W EE+ YFFRLSAYQ KLL YY++H
Sbjct: 128 YSGWYSVRDEAYYAEDETTVNADGVRLGPQGTPVEWTEEKSYFFRLSAYQQKLLDYYDAH 187

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV SFV+SGL+DLS+SR TF WGI +P D  ++MYVW+DALTNY+T  G
Sbjct: 188 PDFIRPDVRRNEVTSFVRSGLQDLSISRTTFTWGIPVPGDEAHVMYVWVDALTNYITGVG 247

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    S  +FWPADLH+IGKDI+RFHA+YWPAFL+SA +  PK VF+HGFI ++GEK+
Sbjct: 248 YPDTDSASFKRFWPADLHIIGKDIIRFHAVYWPAFLMSAGIAPPKTVFAHGFIHNRGEKM 307

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP ++ +  GVDALRYFL+REI  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 308 SKSVGNVIDPFDLAKAYGVDALRYFLLREIPFGQDGSYSHEAIVARTNADLANDLGNLAQ 367

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+  G +P+PG     D  IL+    +  ++RE M+ Q IH+AL  + ++V++
Sbjct: 368 RSLSMIAKNLSGTLPSPGPLAPDDAEILASADAMGPKVREAMEAQQIHQALGVIWAVVAD 427

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF A  PWEL+KT+P+R  TVL+ T EVIRQ+A+L Q FVP  A K+ D+L ++ + 
Sbjct: 428 ANRYFAASAPWELRKTDPERFGTVLWTTAEVIRQVALLAQPFVPTSAAKLLDLLDISSDA 487

Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRFL 511
           R F S        G  +     P+FPR++
Sbjct: 488 RDFASLGGAGRLAGGTVLPAPAPVFPRYV 516


>gi|154253553|ref|YP_001414377.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157503|gb|ABS64720.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 520

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 268/514 (52%), Positives = 355/514 (69%), Gaps = 4/514 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  YI+TAI+YPN  PHIGHAYE+I  DV+AR+ RLDG DV F TG D+HGQK+A+
Sbjct: 1   MSAPKAFYITTAISYPNGPPHIGHAYEVITTDVIARYKRLDGYDVRFLTGVDDHGQKMAQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +   D+ +  F  M + L+IS DDFIRTTE RH   C+ LW+KI+ KGDIY
Sbjct: 61  TAKAKGTTPQALADEMAPKFLAMDERLNISNDDFIRTTEARHEKACQHLWEKIAAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            G YSGWYS+RDEA+Y++DE+  G  GQ        PV+WMEEE YFFRLSAYQ+KLL+ 
Sbjct: 121 TGTYSGWYSVRDEAFYDEDELTTGEGGQKLAPGTGTPVEWMEEETYFFRLSAYQEKLLAL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
           YES P+FI P  RRNE+++FVK GL DLS+SR     DWG+ +P DP ++MYVWIDALTN
Sbjct: 181 YESQPDFIQPASRRNEILAFVKRGLNDLSISRARTKLDWGVGVPGDPNHVMYVWIDALTN 240

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y+T  GY D       ++WPAD+H+IGKDI+RFHA+ WPA L++A + LPK+VF HGF+ 
Sbjct: 241 YITGLGYPDMDGDLFKRYWPADMHIIGKDIVRFHAVIWPAMLMAAEVALPKRVFGHGFLN 300

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +GEK+SKS+GNVIDP  + +  GVD +RYF  RE+  G DG Y  D +  R+NADLAN 
Sbjct: 301 VRGEKMSKSVGNVIDPFTITDTYGVDPIRYFFCREVTYGADGSYSHDTVVNRINADLAND 360

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL  RS+SMI K+  G +P  GAFT  D+++L   + + ++ RE M+   IH  + +V
Sbjct: 361 IGNLAQRSLSMIAKNCGGEVPAYGAFTAEDKAVLDAAAALPEKTREQMERLEIHSYVGEV 420

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++VSE +RYF  Q+PW LKKT+P+R  TVLYVT EV+R+ A++LQ  +P    K+ D+L
Sbjct: 421 FAVVSEANRYFAGQEPWALKKTDPERMGTVLYVTAEVVRRCALMLQPVMPASIAKLLDLL 480

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            V +  R F  +   L PG  L      +FPR++
Sbjct: 481 AVPEGARAFSDIAASLTPGTALPAPAG-VFPRYV 513


>gi|27352779|dbj|BAC49781.1| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 658

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 262/507 (51%), Positives = 359/507 (70%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ + AQN G
Sbjct: 150 FYITTAIAYPNGNPHIGHAYEAIATDTLARFARLDGKDVFFLTGTDEHGLKMIQTAQNEG 209

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T      +N+  F+ M + L++S+D FIRTTE++HH + + +W+++   GDIY   Y+G
Sbjct: 210 LTPSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 269

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE     DG     Q  PV+W+EE+ YFFRLSAYQ+KLL  Y  +P+F
Sbjct: 270 WYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRLSAYQEKLLKLYTDNPDF 329

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNY+T  G+ D
Sbjct: 330 IGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMYVWVDALTNYITGVGFPD 389

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    ++WPAD+H+IGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ ++GEK+SKS
Sbjct: 390 ESD-KNWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKS 448

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  + ++ GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN +GNL  RS+
Sbjct: 449 VGNVVDPFNLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 508

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K   G++P PG F+++D++IL++   ++   RE M  Q IH  L  V ++V+E +R
Sbjct: 509 SMIAKQLGGVLPEPGEFSDNDKAILAMADGMIAASREAMATQQIHHWLNAVWAVVAEANR 568

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  +  + D L V    R F
Sbjct: 569 YFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPTASGLLLDSLGVPGGERNF 628

Query: 487 QSLD--QRLKPGFMLHKTFDPIFPRFL 511
            +L   +R+ PG  L     P FPR++
Sbjct: 629 AALGGAKRIAPGSTLPAP-TPAFPRYI 654


>gi|161511098|ref|NP_771156.2| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 543

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 262/507 (51%), Positives = 359/507 (70%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ + AQN G
Sbjct: 35  FYITTAIAYPNGNPHIGHAYEAIATDTLARFARLDGKDVFFLTGTDEHGLKMIQTAQNEG 94

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T      +N+  F+ M + L++S+D FIRTTE++HH + + +W+++   GDIY   Y+G
Sbjct: 95  LTPSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 154

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE     DG     Q  PV+W+EE+ YFFRLSAYQ+KLL  Y  +P+F
Sbjct: 155 WYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRLSAYQEKLLKLYTDNPDF 214

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNY+T  G+ D
Sbjct: 215 IGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMYVWVDALTNYITGVGFPD 274

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    ++WPAD+H+IGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ ++GEK+SKS
Sbjct: 275 ESD-KNWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKS 333

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  + ++ GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN +GNL  RS+
Sbjct: 334 VGNVVDPFNLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 393

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K   G++P PG F+++D++IL++   ++   RE M  Q IH  L  V ++V+E +R
Sbjct: 394 SMIAKQLGGVLPEPGEFSDNDKAILAMADGMIAASREAMATQQIHHWLNAVWAVVAEANR 453

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  +  + D L V    R F
Sbjct: 454 YFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPTASGLLLDSLGVPGGERNF 513

Query: 487 QSLD--QRLKPGFMLHKTFDPIFPRFL 511
            +L   +R+ PG  L     P FPR++
Sbjct: 514 AALGGAKRIAPGSTLPAP-TPAFPRYI 539


>gi|319407220|emb|CBI80859.1| Methionyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 513

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 266/510 (52%), Positives = 367/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I++D LARF + DG +V F +GTDEHG K+ + A+
Sbjct: 2   RDIYYITTPIFYPNSAPHIGHAYNAIVSDTLARFQKADGKNVFFLSGTDEHGLKMQQTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  VL+ S +DFIRTTE+RHH  C+ LWKK+  KGDIY GC
Sbjct: 62  MLNITPQQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R E+YY + +     +G     +  +PV+W EEE YFFRLS Y+  LL YYE 
Sbjct: 122 YAGWYSVRQESYYEEKDTEIDQEGIRREKELGSPVEWNEEESYFFRLSRYEKALLQYYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+ISFVKSGLKD+S+SR TFDWGI++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDFIGPNERRNEIISFVKSGLKDISISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTGI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +  N    K  FWPAD+H+IGKDI RFHAIYWPAFL+SA + LPK++F HGF+L++G K
Sbjct: 242 DFF-NETSKKRNFWPADVHIIGKDITRFHAIYWPAFLMSAEIELPKRIFVHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYF +REI  G+DG Y+ D    R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDRYGLDQVRYFFLREIPFGQDGSYNHDNFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ +  IPTP AF   DE +L    +VL+ +R+ M NQ  H AL+ + S+V+
Sbjct: 361 QRSLSMVEKNCNMKIPTPAAFLIQDEQLLKQSFQVLEVVRQTMSNQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K NP+R  TVLY+T+EV+R++ I+L  F+P+ A K+ D L +A+E
Sbjct: 421 DANRYFANEEPWSLRKNNPERFFTVLYITLEVLRRVGIMLLPFIPQSATKLLDSLAIAEE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D R+K G +L     PIFPR++
Sbjct: 481 DRLLHHISDLRIKEGTVL-PIPAPIFPRYI 509


>gi|170744506|ref|YP_001773161.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198780|gb|ACA20727.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 515

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/510 (52%), Positives = 364/510 (71%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  I+TAI+YPN  PHIGHAYE+I AD +ARF R+DG DV FTTGTDEHG KI + A  
Sbjct: 4   ERFTITTAISYPNGAPHIGHAYEVIAADAIARFKRIDGYDVFFTTGTDEHGLKIQQTAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++ + FVD  +  FR MA+ L+  +D FIRTT+  H  + + LW+++   GDIY   Y
Sbjct: 64  AGISPRAFVDAMAPRFRTMAETLNCGFDRFIRTTDPDHIASSQALWRRMEAAGDIYLAKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +GWYS+RDEAYY++ E+  G DG +       PV+W+EEE YFFRLSAY D+LL++Y  H
Sbjct: 124 AGWYSVRDEAYYDEAELVLGQDGVRRAERTGTPVEWVEEESYFFRLSAYADRLLAHYAEH 183

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV+SGL+DLS+SR TFDWG+ +P  P ++MYVW+DALTNY+T+ G
Sbjct: 184 PDFIGPETRRNEVVSFVRSGLQDLSVSRTTFDWGVPVPGAPGHVMYVWVDALTNYITSCG 243

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D  + + WPADLHVIGKDI+RFHA+YWPAFL+SA +PLP++VF HGF+L +GEK+
Sbjct: 244 FPDEAD-PRWRRWPADLHVIGKDIIRFHAVYWPAFLMSAGVPLPRRVFGHGFLLSRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DPI +    GVD LRYF++RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 303 SKSLGNVVDPIALAGLYGVDPLRYFVLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++MI ++ DG +P PG   E+D +IL+    +    R  M++  +H ALA++ ++V+E
Sbjct: 363 RSLTMIARNCDGAVPRPGDLAEADRAILAAADALPAVARAAMEDYALHHALAEIWAVVAE 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF AQ+PW L+KT+P R +TVLY T E +R + IL+Q FVP  A ++ D+L V  E 
Sbjct: 423 ANRYFAAQEPWTLRKTDPARMATVLYCTAETLRAVGILVQPFVPAAACRLLDLLAVPGEA 482

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           R    + +  RL PG  L     PIFPRF+
Sbjct: 483 RGLAQVGEGGRLVPGTALPAP-SPIFPRFV 511


>gi|13470650|ref|NP_102219.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|25009388|sp|Q98MV8|SYM_RHILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14021392|dbj|BAB48005.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 516

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 268/510 (52%), Positives = 358/510 (70%), Gaps = 5/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y++T I YPN +PHIGHAY +I  D LARF RLDG DV F TGTDEHG K+ + A+
Sbjct: 3   REKYYLTTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+NS  FR M + +  S D++IRTTE RH+ +C+ +WK ++  GDIY   
Sbjct: 63  KEGITPQALADRNSAIFRSMTEAVGGSNDEYIRTTEPRHYASCQAIWKAMAANGDIYLDR 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+R EAY+++ E   G DG       +PV+W EEE YFFRLSAYQDKLL+ YES 
Sbjct: 123 YSGWYSVRQEAYFDESETTLGEDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQ 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ P ERRNEV+SFVKSGLKDLS+SR TF WG+ +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PDFVGPAERRNEVMSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAAG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D     + ++WPA  H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDT-KSDQWRYWPA-THIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKM 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP  +IE  G+D +RYF +RE+  G+DG Y  D +  R NADLANG+GNL  
Sbjct: 301 SKSVGNVVDPFALIEHYGLDQVRYFFLREVPFGQDGSYSHDAIVNRTNADLANGLGNLAQ 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+  G++P  G  T++D +IL      L   R+ M  Q IH ALA +  +V+E
Sbjct: 361 RSLSMIAKNCGGVVPKRGEMTDADSAILDQAVAALTTARKAMAGQGIHLALAAIFDVVAE 420

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            DRYF  Q PW LKKT+P+R  TVL+ T E++R++A+L Q F+P  A K+ D+L V  + 
Sbjct: 421 ADRYFAGQAPWALKKTDPERMETVLWTTAELVRRVAVLCQPFIPGSAAKLLDLLAVPADK 480

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
           R F  +  D  L PG  L    + +FPR++
Sbjct: 481 RDFVHVHADYALVPGTALPAP-EGVFPRYV 509


>gi|188583889|ref|YP_001927334.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347387|gb|ACB82799.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 522

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/512 (53%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG +VLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGREVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD +YD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  AAKAGVTPRAFVDDMAGRFKAVADRLDCAYDRFIRTTEPDHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E     DG   +A+ + PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETVLAPDGSRRSAKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLAPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D      A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDA-GAPNARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGGDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG +P PG FTE+D  +L+  + + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCDGAVPEPGDFTEADARLLAAAAALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R   F   D RL+ G  L     PIFPRF
Sbjct: 485 VDRRSFAFAGEDHRLQGGTALPAP-APIFPRF 515


>gi|170747932|ref|YP_001754192.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654454|gb|ACB23509.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 525

 Score =  568 bits (1465), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/510 (54%), Positives = 358/510 (70%), Gaps = 5/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+   +STAI+YPN  PHIGHAYE+I AD +ARFHRLDG DVLF+TGTDEHG KI +AA 
Sbjct: 10  RKTFALSTAISYPNGAPHIGHAYEVIAADAIARFHRLDGYDVLFSTGTDEHGLKIQQAAT 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T + FVD  +  F+ MAD +D +YD FIRTTE  H+   + +W+++   GDIY   
Sbjct: 70  RAGTTPRAFVDGTAARFQAMADRMDCAYDRFIRTTEPDHYAAAQEIWRRMEANGDIYLDK 129

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+RDEAYY++ E     DG   + A   PV+WMEEE + FRLSAYQDKLL  Y+ 
Sbjct: 130 YAGWYSVRDEAYYDEAETRLLEDGSRRSLATDTPVEWMEEENFLFRLSAYQDKLLKLYDE 189

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P FI P  RRNEV SFV+SGLKDLS+SR  FDWG+ +P  P ++MYVW+DALTNYLT T
Sbjct: 190 QPGFIGPDTRRNEVASFVRSGLKDLSVSRTNFDWGVPVPGHPNHVMYVWVDALTNYLTVT 249

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D  D  K +FWP DLHVIGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF+L KGEK
Sbjct: 250 GFPDASDPRK-EFWPMDLHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFLLSKGEK 308

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP E+ +  GVD +RYF++RE+  G DG Y  + +  R+NADLAN +GNL 
Sbjct: 309 MSKSLGNVLDPFELADTYGVDPVRYFVLREVPFGGDGSYSHEAIIGRINADLANDLGNLA 368

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ DG +P PGA   +D ++L+    +    R  M +  +H  LA++ ++V+
Sbjct: 369 QRSLSMVAKNCDGAVPDPGALDAADTALLAQADALPARARTLMGDLALHTVLAEIWAVVA 428

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF AQ+PW+L+K++P R + VLY T+E +R   IL Q FVP  A K+ D+L V  +
Sbjct: 429 EANRYFAAQEPWKLRKSDPARMNAVLYTTLESLRVFGILTQPFVPGAAAKLLDLLAVPAD 488

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            R    + +  RL PG  L     PIFPRF
Sbjct: 489 RRGLADVGEGGRLVPGTALPAP-APIFPRF 517


>gi|319404210|emb|CBI77803.1| Methionyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 513

 Score =  568 bits (1464), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 261/510 (51%), Positives = 367/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I++D LARF + DG +V F +GTDEHG K+ + A+
Sbjct: 2   RDIYYITTPIFYPNSAPHIGHAYNAIVSDTLARFQKADGKNVFFLSGTDEHGLKMQQTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  VL+ S +DFIRTTE+RHH  C+ LWKK+  KGDIY GC
Sbjct: 62  MLNITPQQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R E+YY + +     +G     +  +PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YAGWYSVRQESYYEEKDTEVDQEGVRREKELGSPVEWNEEESYFFRLSRYEKALLQHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+ISFVKSGLKD+S+SR TFDWGI++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDFIGPNERRNEIISFVKSGLKDISISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTGI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +  N    K  FWPAD+H+IGKDI RFHAIYWPAFL+SA + LPK++F+HGF+L++G K
Sbjct: 242 DFF-NETSKKRNFWPADVHIIGKDITRFHAIYWPAFLMSAEIELPKRIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYF +RE+  G+DG Y+ D    R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDCYGLDQVRYFFLREVPFGQDGSYNHDNFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ +  +PTP AF   DE +L    +VL+ +R+ M NQ  H AL+ + S+V+
Sbjct: 361 QRSLSMVEKNCNMKVPTPAAFLIQDEQLLKQSLQVLEVVRQTMSNQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K NP+R  TVLY+T+EV+R++ I+L  F+P+ A K+ D L +A+E
Sbjct: 421 DANRYFANEEPWSLRKNNPERFFTVLYITLEVLRRIGIMLLPFIPQSATKLLDSLAIAEE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D ++K   +L     PIFPR++
Sbjct: 481 DRLLHHISDLKIKEETVLPPPV-PIFPRYI 509


>gi|111022628|ref|YP_705600.1| methionyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110822158|gb|ABG97442.1| methionine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 519

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 262/509 (51%), Positives = 352/509 (69%), Gaps = 2/509 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y++TAIAYPN  PHIGHAYE I +D LARF RLDG DV F TGTDEHG K+ + A 
Sbjct: 10  RPPFYLTTAIAYPNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTAA 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  +    +NS  F  M   L+IS+D FIRTT+  H +  + +W+++ D GDIY   
Sbjct: 70  KEGIDVRELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWRRMLDNGDIYLDT 129

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  YFF+LS YQDKLL  YE 
Sbjct: 130 YSGWYSVRDEAFYTEAETTLQDDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLRLYEE 189

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE++SFVK GLKDLS+SR TFDWG+ +PD P+++MYVW+DALTNYLT  
Sbjct: 190 NPDFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVPVPDHPEHVMYVWVDALTNYLTGA 249

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D       KFWPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGEK
Sbjct: 250 GYPDTDSEQFGKFWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGEK 309

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+NADLAN +GNL 
Sbjct: 310 MSKSVGNVVDPVAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRINADLANELGNLA 369

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ D  +PTPG  TE D ++L+    +L  +R     Q +H AL  + S++ 
Sbjct: 370 QRSLSMVAKNCDAQVPTPGELTEDDTAMLAQADALLGRVRAEYDVQALHLALEAIWSVLG 429

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P+R +TVLYVT+EV+R + IL+Q  +P  A KI D+L    +
Sbjct: 430 ETNRYFSKQEPWVLRKTDPERMATVLYVTLEVVRIVGILVQPVMPDAAEKILDLLGQKAD 489

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  L  R+  G  L      +FPR++
Sbjct: 490 ARQFSDLSTRIVAGTPLPAP-SGVFPRYV 517


>gi|49474218|ref|YP_032260.1| methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|49239722|emb|CAF26101.1| Methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 519

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 262/510 (51%), Positives = 363/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I +D LARF RLDG +V F +GTDEHG K+ + A 
Sbjct: 2   RDTYYITTPIFYPNSTPHIGHAYSAIASDALARFQRLDGKNVFFLSGTDEHGLKMQQTAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K   D+NS  F+ M   L+ S DDFIRTTE+RH+  C+ +WKK+   GDIY GC
Sbjct: 62  ALGMTPKQLADRNSAVFKKMLAALNCSNDDFIRTTEERHYQACQEIWKKMQADGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y GWYS+R EAYY + E   G D      +  +PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YKGWYSVRQEAYYEEKETEVGEDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ER NEVISFVKSGLKD+S+SR +F WGI +P +P+++MYVW+DALTNYL+  
Sbjct: 182 HPDFIAPLERYNEVISFVKSGLKDISISRASFHWGICVPGNPKHVMYVWVDALTNYLSAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D  +  K  FWPA++H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+L++G K
Sbjct: 242 GFFDG-NSKKRDFWPANIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+I+  G+D +RYFL+RE+  G+DG Y  D +  R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYGHDNVVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ D  +P P AF   DE +L    + L   R+ M +Q +H AL+ + S+V+
Sbjct: 361 LRSLSMIAKNCDAKVPRPAAFLIQDEQLLKQSLQALDITRQAMSSQEMHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K NP+R STVLY+TVE++R++ I+L  F+P+ A K+ D L +++ 
Sbjct: 421 DANRYFANEQPWNLRKNNPERFSTVLYITVEILRRIGIMLLPFMPQSAAKLLDSLAISEN 480

Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +R    +   +++ G  L    +PIFPR++
Sbjct: 481 DRLLYHISHSKIQEGLDLPPP-EPIFPRYI 509


>gi|229494943|ref|ZP_04388694.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229318167|gb|EEN84037.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 532

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 261/510 (51%), Positives = 358/510 (70%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER   YI+TAIAYPN  PHIGHAYE I +D LARF RLDG +V F TGTDEHG K+ + A
Sbjct: 22  ERSPFYITTAIAYPNGAPHIGHAYEYISSDALARFKRLDGHEVFFMTGTDEHGLKMQQTA 81

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F+++  VL+ISYD FIRTT+  H    + +W+K++  GDIY  
Sbjct: 82  IKEGIDVRELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLD 141

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  Y FRLSAY+D+LL+ YE
Sbjct: 142 TYSGWYSVRDEAFYTEAETTLLDDGTRQSTETGTPVEWTEESNYTFRLSAYEDRLLALYE 201

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++SFVK GLKDLS+SR TFDWG+++P DP ++MYVW+DALTNYLT 
Sbjct: 202 EHPEFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVEVPGDPDHVMYVWVDALTNYLTG 261

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +       KFWPA LH+IGKDI RFH +YWPAFL+SA + LP++VF HGF+ +KGE
Sbjct: 262 VGYPNVDSAEFEKFWPASLHIIGKDITRFHTVYWPAFLMSAGIELPERVFVHGFLYNKGE 321

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DPI ++++ G+DA+R+FL+REI+ G+DG Y  + +  R+NADL+N +GNL
Sbjct: 322 KMSKSVGNVVDPIAMVDQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNADLSNELGNL 381

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS++M+ K+ D  +PTPG FTE D ++L+    +L + R     Q +H AL  +  ++
Sbjct: 382 AQRSLTMVAKNCDAQVPTPGEFTEDDLAMLASADALLAKCRSEFDVQALHLALEAIWGVL 441

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + +L+Q  +P  A++I D+L  ++
Sbjct: 442 GETNRYFSKQEPWVLRKTDPARMATVLYVTLEVVRIVGLLVQPVMPDAASRILDLLGQSE 501

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           ENR F  +  R+     L     P+FPRF+
Sbjct: 502 ENRQFADIAVRIDANRKLPAP-APVFPRFV 530


>gi|319783483|ref|YP_004142959.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169371|gb|ADV12909.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 516

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/510 (52%), Positives = 354/510 (69%), Gaps = 5/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K YI+T I YPN +PHIGHAY +I  D LARF RLDG DV F TGTDEHG K+ + A+
Sbjct: 3   RDKFYITTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     D+NS  FR M + +  S D +IRTTE RH+++C+ +WK ++  GDIY   
Sbjct: 63  KEGITPLALADRNSAIFRAMTEAMGGSNDQYIRTTEPRHYESCQAIWKAMAANGDIYLDR 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+R EAY+++ E   G DG       +PV+W EEE YFFRLSAYQDKLL+ YES 
Sbjct: 123 YSGWYSVRQEAYFDESETTLGDDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQ 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ P ERRNEV+SFVKSGLKDLS+SR TF WG+ +P D +++MYVW+DALTNY+T  G
Sbjct: 183 PDFVGPTERRNEVLSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAAG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D     +  +WPA  H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+ ++GEK+
Sbjct: 243 YPDT-KAEQWHYWPA-THIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKM 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP  ++E  G+D +RYF +RE+  G DG Y  D +  R NADLANG+GNL  
Sbjct: 301 SKSVGNVVDPFAMVEHYGLDQVRYFFLREVPFGNDGSYSHDAIVNRTNADLANGLGNLAQ 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+  G++P  G  T++D +IL   +  L   R+ +  Q IH ALA +  +V+E
Sbjct: 361 RSLSMIAKNCGGVVPQRGELTDADRAILDQAAAALDIARKAVAEQGIHLALAAIFGVVAE 420

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            DRYF  + PW LKKTN  R  TVL+ T EV+R++A+L Q F P  A K+ D+L V  E+
Sbjct: 421 ADRYFAGEAPWALKKTNLARMETVLWTTAEVVRRVAVLCQPFTPGSAAKLLDLLAVPAES 480

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
           R F  +  D  L PG  L    + +FPR++
Sbjct: 481 RDFVHVHADHALVPGTAL-PVPEGVFPRYV 509


>gi|226365134|ref|YP_002782917.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226243624|dbj|BAH53972.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 519

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 259/509 (50%), Positives = 354/509 (69%), Gaps = 2/509 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y++TAIAYPN  PHIGHAYE I +D LARF RLDG DV F TGTDEHG K+ + A 
Sbjct: 10  RPPFYLTTAIAYPNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTAA 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  +    +NS  F  M   L+IS+D FIRTT+  H +  + +W+++ + GDIY   
Sbjct: 70  KEGIDVRELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWQRMLEAGDIYLDT 129

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  YFF+LS YQDKLL+ Y+ 
Sbjct: 130 YSGWYSVRDEAFYTEAETTLQEDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLALYDE 189

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE++SFVK GLKDLS+SR TFDWG+ +P  P+++MYVW+DALTNYLT  
Sbjct: 190 NPDFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVPVPGHPEHVMYVWVDALTNYLTGA 249

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D       KFWPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGEK
Sbjct: 250 GYPDTDSEQFGKFWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGEK 309

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+NADLAN +GNL 
Sbjct: 310 MSKSVGNVVDPVAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRINADLANELGNLA 369

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ D  +PTPGA T+ D ++L+    +L+ +R     Q +H AL  + S++ 
Sbjct: 370 QRSLSMVAKNCDAQVPTPGALTDDDTAMLAQADALLERVRAEYDVQALHLALEAIWSVLG 429

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P+R +TVLYVT+EV+R + IL+Q  +P  A KI D+L    +
Sbjct: 430 ETNRYFSKQEPWVLRKTDPERMATVLYVTLEVVRIVGILVQPVMPDAAEKILDLLGQKSD 489

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  L  R+  G  L      +FPR++
Sbjct: 490 ARQFSDLPARIVAGTPLPAP-SGVFPRYV 517


>gi|54026880|ref|YP_121122.1| methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54018388|dbj|BAD59758.1| putative methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 518

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 263/510 (51%), Positives = 355/510 (69%), Gaps = 8/510 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAYPN  PHIGHAYE I AD +ARF RLDG DV F TGTDEHGQK+ +AA   G
Sbjct: 8   FYVTTAIAYPNGAPHIGHAYEYISADAIARFKRLDGYDVFFMTGTDEHGQKMQQAAAAEG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  +    +NS  F  +   LD+SYD FIRTT+  H      +W+++   GDIY   Y+G
Sbjct: 68  IPVQDLAARNSDVFERLDKALDVSYDRFIRTTDADHRAASVAIWERMLANGDIYLDNYAG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDEA+Y ++E     DG   + +   PV W EE  +FFRLS YQD+LL++YE HPE
Sbjct: 128 WYSVRDEAFYTEEETTLLEDGSRISTETKTPVTWTEESNFFFRLSKYQDRLLAHYEEHPE 187

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE++S+VK+GLKDLS+SR TFDWG+ +P  P ++MYVW+DALTNYLT  G+ 
Sbjct: 188 FIAPATRRNEIVSYVKAGLKDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTGVGFP 247

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D    +  KFWPAD+H+IGKDI RFH +YWPAFL+SA +PLPK+VF HGF+ +KGEK+SK
Sbjct: 248 DTDSPAFRKFWPADVHIIGKDITRFHTVYWPAFLMSAGVPLPKRVFVHGFLYNKGEKMSK 307

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP+E+++E G+DA+R+FL+REI+ G+DG Y  D +  R+NADLAN  GNLV RS
Sbjct: 308 SVGNVVDPLELVDEYGLDAVRFFLLREISYGQDGSYSHDAIVARINADLANEFGNLVQRS 367

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++M+ K+ D  +PTPG FT  D ++L   + +L+  R     Q +H AL  +   + E +
Sbjct: 368 LTMVHKNCDAAVPTPGEFTAEDRALLDRAAGLLERCRAEFDAQQMHLALEAIWLTLGETN 427

Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           RYF AQ+PW L+K+  +    R +TVLYVT+EV+R +AIL+Q  +P  A +I D+L  A 
Sbjct: 428 RYFSAQQPWALRKSGTEADLARMATVLYVTLEVVRIVAILVQPVMPGSAGRILDLL--AQ 485

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + R F  L   L PG  L    +P+FPR++
Sbjct: 486 QGRTFADLATPLTPGTPLPAP-EPVFPRYV 514


>gi|226307854|ref|YP_002767814.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226186971|dbj|BAH35075.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 532

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 260/510 (50%), Positives = 357/510 (70%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER   YI+TAIAYPN  PHIGHAYE I +D LARF RLDG +V F TGTDEHG K+ + A
Sbjct: 22  ERSPFYITTAIAYPNGAPHIGHAYEYISSDALARFKRLDGHEVFFMTGTDEHGLKMQQTA 81

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F+++  VL+ISYD FIRTT+  H    + +W+K++  GDIY  
Sbjct: 82  IKEGIDVRELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLD 141

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  Y FRLSAY ++LL+ YE
Sbjct: 142 TYSGWYSVRDEAFYTESETTLLEDGTRQSTETGTPVEWTEESNYTFRLSAYGERLLALYE 201

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++SFVK GLKD+S+SR TFDWG+K+P DP ++MYVW+DALTNYLT 
Sbjct: 202 EHPEFIAPTTRRNEIVSFVKGGLKDISISRTTFDWGVKVPGDPDHVMYVWVDALTNYLTG 261

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +       KFWPA LH+IGKDI RFH +YWPAFL+SA + LP++VF HGF+ +KGE
Sbjct: 262 VGYPNVDSEEFKKFWPASLHIIGKDITRFHTVYWPAFLMSAGIELPERVFVHGFLYNKGE 321

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DPI ++++ G+DA+R+FL+REI+ G+DG Y  + +  R+NADL+N +GNL
Sbjct: 322 KMSKSVGNVVDPIAMVDQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNADLSNELGNL 381

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS++M+ K+ D  +PTPG FTE D ++L+    +L + R     Q +H AL  +  ++
Sbjct: 382 AQRSLTMVAKNCDAQVPTPGEFTEDDLAMLASADALLAKCRSEFDVQALHLALEAIWGVL 441

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + +L+Q  +P  A++I D+L  ++
Sbjct: 442 GETNRYFSKQEPWVLRKTDPARMATVLYVTLEVVRIVGLLVQPVMPDAASRILDLLGQSE 501

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           ENR F  +  R+     L     P+FPRF+
Sbjct: 502 ENRQFADIAVRIDANRKLPAP-APVFPRFV 530


>gi|49475612|ref|YP_033653.1| methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|49238419|emb|CAF27646.1| Methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 519

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 260/506 (51%), Positives = 361/506 (71%), Gaps = 4/506 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YPN  PHIGHAY  I +DVLARF RLDG +V F +GTDEHG K+ + A   G+
Sbjct: 6   YITTPIFYPNGAPHIGHAYSAIASDVLARFQRLDGKNVFFLSGTDEHGLKMQQTAVALGI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D+NS  F+ M   L+ S +DFIRTTEKRH+  C+ +WKK+   GDIY   Y+GW
Sbjct: 66  TPKQLTDRNSAVFQKMLAALNCSNNDFIRTTEKRHYQACQEIWKKMKANGDIYLSRYTGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+R EAYY + +   G D      +  +PV+W EEE YFF+LS Y+  LL +YE HP+F
Sbjct: 126 YSVRQEAYYEEKDTEVGEDNIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEKHPDF 185

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P ERRNEVISF+KSGLKD+S+SR +F+WGI +P+D +++MYVW+DALTNYL+  G+ D
Sbjct: 186 IAPPERRNEVISFIKSGLKDISISRASFNWGICVPNDSKHVMYVWVDALTNYLSAIGFFD 245

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +  K  FWPA +H+IGKDI+RFHAIYWPAFL+SA + LPK++F+HGF+L+ G K+SKS
Sbjct: 246 E-NSKKRAFWPASVHIIGKDIIRFHAIYWPAFLMSAGIALPKRIFAHGFLLNNGVKMSKS 304

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP E+I+  G+D +RYFL+RE+  G+DG Y  D    R+NADLAN +GNL  RS+
Sbjct: 305 IGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYSHDSFVNRINADLANDLGNLAQRSL 364

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K+ D  +P P AF   DE +L    + L  +R+ M +Q IH AL+ + S+V++ +R
Sbjct: 365 SMIAKNCDAKVPLPAAFLVQDEQLLEKSLQTLDTMRKAMSSQEIHLALSAIFSVVADANR 424

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  ++PW L+K NP+R STVLY+T+E++R++ I+L  F+P+ A K+ D L ++ E+R  
Sbjct: 425 YFANEQPWSLRKNNPERFSTVLYITLEILRRIGIMLLPFMPQSAAKLLDSLKISQEDRLL 484

Query: 487 QSL-DQRLKPGFMLHKTFDPIFPRFL 511
           Q + + +++ G  L    +PIFPR++
Sbjct: 485 QHISNSKIQEGLDLPPP-EPIFPRYI 509


>gi|304391677|ref|ZP_07373619.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295906|gb|EFL90264.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 513

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 263/509 (51%), Positives = 356/509 (69%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+TAI+YPN  PHIGHAYE I AD +ARF RLDG DV F  GTD HGQK+ + A++
Sbjct: 3   QKYYITTAISYPNGAPHIGHAYEFICADAIARFKRLDGYDVRFQIGTDVHGQKMFQTARD 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   D+NS  F+ M +   IS+D FIRT+++ HH   + +W  +   GDIYK  Y
Sbjct: 63  LGITPKELADKNSDAFQSMTEHYGISWDRFIRTSDEDHHRASQAIWSAMEANGDIYKDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWYS+RDEAYY +DE     DG+    Q +PV+W+EEE YFFRLSAY DKLL+ ++  P
Sbjct: 123 AGWYSVRDEAYYEEDETRLTEDGKRLGPQGSPVEWVEEESYFFRLSAYGDKLLALFDEQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  R+NE++SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNYLT  GY
Sbjct: 183 DFIAPASRKNEIVSFVKGGLRDLSISRTTFDWGVKVPGDDKHVMYVWVDALTNYLTGAGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  +     +WPADLHVIGKDI RFHA+YWPAFL+SA + LPK+V+ HGF+L  GEK+S
Sbjct: 243 PDT-ESELWSYWPADLHVIGKDITRFHAVYWPAFLMSAGIDLPKRVYGHGFLLANGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP+++  E G+DA+RY+  R +  G DG Y  D +    NADLAN  GNL  R
Sbjct: 302 KSLGNVADPMDLAAEYGIDAMRYYCQRLVRFGSDGSYSHDDIVNHTNADLANNFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K+ DG +   GAFTE+D ++L+    +L   R+ +   + + AL  + + +   
Sbjct: 362 SLSMIFKNCDGKLDGAGAFTEADTALLATADGMLAPCRDAIDRTVPNEALDAIWATLDAA 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYFD Q PW LKKT+P+R +TVLYVT EV+RQ++IL+QAF+P+ A K+ D L + ++ R
Sbjct: 422 NRYFDEQAPWGLKKTDPERMATVLYVTAEVVRQVSILVQAFLPESAEKLLDQLKIPEDQR 481

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D RL    ++ K  + +FPR++
Sbjct: 482 DFAYLGGDNRLDTATVIEKP-EGVFPRYV 509


>gi|163868324|ref|YP_001609533.1| methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161017980|emb|CAK01538.1| Methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 519

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 255/510 (50%), Positives = 365/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I +DVLARF RL+G  V F +GTDEHG K+ + A 
Sbjct: 2   RDTYYITTPIFYPNGHPHIGHAYSAIASDVLARFQRLNGKKVFFLSGTDEHGLKMQQTAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  VL+ S DDFIRTTE+RH+  C+ +WKK+ + GDIY G 
Sbjct: 62  ALDMTPQQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEENGDIYLGR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R EAYY + +   G D      +  +PV+W EEE YFFRLS Y+  LL YYE 
Sbjct: 122 YTGWYSVRQEAYYEEKDTEVGPDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEYYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ERRNE+ISF+KSGLKD+S+SR +F+WG+ +P++P+++MYVW+DALTNYL+  
Sbjct: 182 HPDFIAPLERRNEIISFIKSGLKDISISRASFNWGVAVPENPKHVMYVWVDALTNYLSAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +  N +  K  FWPA+ H+IGKDI+RFHA+YWPAFL+SA + LPK +F+HGF+L++G K
Sbjct: 242 DFF-NKNSKKRNFWPANTHIIGKDIIRFHAVYWPAFLMSAGIELPKNIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+I+  G+D +RYFL+RE+  G+DG Y+ + L  R+NADLAN +GNL 
Sbjct: 301 MSKSVGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYNHESLVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ D  +P P AF   D+ +L    +VL+ + + M    +H AL+ + S V+
Sbjct: 361 QRSLSMIAKNCDAKVPKPAAFLVQDKQLLEQSLQVLETVHQAMSFHSMHLALSAIFSTVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K++P+R STVLY+TVE++R++ I+L  F+P+ A K+ D L VA++
Sbjct: 421 DANRYFANEQPWSLRKSDPERFSTVLYITVEILRRIGIMLLPFIPQSAAKLLDSLAVAED 480

Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +R    +   +++ G  L    +PIFPR++
Sbjct: 481 DRLLYHIAHAKIQEGLDLPPP-EPIFPRYI 509


>gi|296140917|ref|YP_003648160.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296029051|gb|ADG79821.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 516

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 251/512 (49%), Positives = 360/512 (70%), Gaps = 2/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  Y++TAIAYPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAADKAFYVTTAIAYPNGVPHIGHAYEYIATDTIARFKRLDGFDVFFLTGTDEHGLKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+ TK   D+N+  F  +   +  ++D FIRTT+  H+   + +W+K++ +GDIY
Sbjct: 61  AAAKEGIETKALADRNAAAFEALQRAVGSTFDRFIRTTDTDHYAASQAIWEKLAARGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
              ++GWYS+RDEAYY +DE     DG     +   PV+W EE  YFFRLSAYQDKLL  
Sbjct: 121 LDTFAGWYSVRDEAYYAEDETALLEDGTRAAISTGTPVEWTEEASYFFRLSAYQDKLLEL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +E++P ++ P  RRNE++SF+K GLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYL
Sbjct: 181 FETNPGYLEPATRRNEIVSFIKGGLKDLSISRTTFDWGVPVPGDPDHVMYVWVDALTNYL 240

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T +GY D      A++WP  L +IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ +K
Sbjct: 241 TGSGYPDTSSEQFARYWPPRLQMIGKDIIRFHAVYWPAFLMSAGIELPERVFAHGFLFNK 300

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS+GNV+DP ++I   G+DA+R+FL+RE++ G+DG Y  + +  R+NADLAN +G
Sbjct: 301 GEKMSKSVGNVVDPYQLIAAYGLDAVRFFLLREVSFGQDGSYSHEAIVGRINADLANELG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL  RS+SMI K+  G +P PG FT  D ++L+    +L  +R ++  Q +H  L  + +
Sbjct: 361 NLAQRSLSMINKNCAGTVPAPGEFTADDTALLAKADDLLATVRRHVDQQALHLYLESIWA 420

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           ++++ +RYF AQ+PW+LK ++P R +TVLYVT EV+RQ+A+LLQ  +P+   ++  +L  
Sbjct: 421 VLADTNRYFSAQEPWKLKASDPARMATVLYVTAEVVRQVALLLQPVMPESTEELLTLLEQ 480

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             + R F+++  RL+PG  L K    +FPR++
Sbjct: 481 PRDERTFEAVATRLRPGTALPKP-QGVFPRYV 511


>gi|169628221|ref|YP_001701870.1| methionyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240188|emb|CAM61216.1| Methionyl-tRNA synthetase (MetG) [Mycobacterium abscessus]
          Length = 523

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 259/515 (50%), Positives = 357/515 (69%), Gaps = 10/515 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAIAYPN +PHIGHAYE +  D +ARF RLDG DV + TGTDEHG K+A+ A  
Sbjct: 6   DPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVAQTAAA 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+ T      NS  F  +   L+IS+D FIRTT+  H++  + +W+K++D GDIY   Y
Sbjct: 66  AGIPTAQLARHNSDVFEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTY 125

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDEAYY D E     DG         PV W EE  YFFRLSAYQDKLL++YE+H
Sbjct: 126 SGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVDWTEEHSYFFRLSAYQDKLLAHYEAH 185

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV+SFV  GL+DLS+SR TFDWG+ +PD+P+++MYVW+DALTNYLT  G
Sbjct: 186 PEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNYLTGVG 245

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPA++H+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+ +KGEK+
Sbjct: 246 YPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTNKGEKM 305

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DPI ++   G+D +RYFL+RE+  G+DG Y ++GL  R+NADLAN +GNL  
Sbjct: 306 SKSIGNVVDPINLVNTFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQ 365

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+  G++P PG F   D  +L+    +L++ R + +   +H AL  +  ++  
Sbjct: 366 RSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLLEQARTHFEVPAMHLALEAIWQVLGA 425

Query: 424 VDRYFDAQKPWELKKT--------NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +RYF AQ+PW L K+        + +R  TVLY T+EV+R +A+L+Q  +P+ A K+ D
Sbjct: 426 SNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESAAKLLD 485

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +L  AD+ R F ++  RLKPG  L      +FP++
Sbjct: 486 LLGQADDQRDFAAIGTRLKPGVSLPAPTG-VFPKY 519


>gi|240850631|ref|YP_002972031.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267754|gb|ACS51342.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 519

 Score =  558 bits (1438), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 253/510 (49%), Positives = 365/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I +DVLARF RL+G +V F +GTDEHG K+ + A 
Sbjct: 2   RDTYYITTPIFYPNGAPHIGHAYSAIASDVLARFQRLNGKNVFFLSGTDEHGLKMQQTAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+NS  F+ M  VL+ S DDFIRTTE+RH+  C+ +WKK+   GDIY G 
Sbjct: 62  ALGMTPQQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEANGDIYLGR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R EAYY + +   G D      +  +PV+W EEE YFFRLS Y+  LL YYE 
Sbjct: 122 YTGWYSVRQEAYYEEKDTEIGPDNIRREKELGSPVEWNEEESYFFRLSHYEKALLEYYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ERRNE+ISF+KSGLKD+S+SR +F+WGI +P++P+++MYVW+DALTNYL+  
Sbjct: 182 HPDFIAPLERRNEIISFIKSGLKDISISRASFNWGIAVPENPKHVMYVWVDALTNYLSAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+  N +  K  FWPA+ H+IGKDI+RFHA+YWPAFL+SA + LPK +F+HGF+L++G K
Sbjct: 242 GFF-NENSKKRDFWPANTHIIGKDIIRFHAVYWPAFLMSAGIELPKNIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYFL+RE+  G+DG Y  + L  R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDHYGLDQVRYFLLREVPFGQDGSYSHESLVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R +SMI K+ +  +P P +F   D+ +L    +VL+ + + M +  +H AL+ + S+V+
Sbjct: 361 QRCLSMIAKNCNAQVPRPTSFLAQDKQLLEQSLQVLETVHQAMSSYSMHLALSAIFSIVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K + +R STVLY+TVE++R++ I+L  F+P+ A K+ D L VA++
Sbjct: 421 DANRYFANEQPWSLRKNDQERFSTVLYITVEILRRIGIMLLPFIPQSAAKLLDSLAVAED 480

Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +R    +   +++ G  L    +PIFPR++
Sbjct: 481 DRLLYHISHSKIQEGLDLPPP-EPIFPRYI 509


>gi|319898928|ref|YP_004159021.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402892|emb|CBI76443.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 513

 Score =  558 bits (1437), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/510 (51%), Positives = 354/510 (69%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I++D LARF R DG DV F +GTDEHG K+ + AQ
Sbjct: 2   RDIYYITTPIFYPNGTPHIGHAYNAIVSDALARFQRADGKDVFFLSGTDEHGLKMQQTAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M ++L+ S +DFIRTTEKRHH   + LWKK+  KGDIY G 
Sbjct: 62  MLNITPQQLADRNSAVFQKMLEILNCSNNDFIRTTEKRHHQASQELWKKMEAKGDIYLGR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+  EAYY + +      G     + N PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YTGWYSVSQEAYYEEKDTEIDEKGIRREKELNSPVEWNEEESYFFRLSRYEKALLQHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+ I P ERRNE+ISF+KSGLKDLS+SR TFDWG+++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDSIGPNERRNEIISFIKSGLKDLSISRTTFDWGVRVPGNPKHVMYVWVDALTNYLTAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + D     K  FWPAD+H+IGKDI+RFH +YWPAFL+S  + LPK++F+HGF+L++G K
Sbjct: 242 DFFDE-TSQKRNFWPADIHIIGKDIIRFHTVYWPAFLMSVGIELPKRIFAHGFLLNRGVK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYF +RE+  G DG YD D    R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDRYGLDQVRYFFLREVPFGHDGNYDHDSFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +  IPTP AF   DE +L    + L+  R+ M  Q  H AL+ + S+V+
Sbjct: 361 QRSLSMIQKNCNAKIPTPAAFLIQDEQLLKQSLQALEIARQTMSRQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  ++PW L K NP+R  TVLY+T+E++R++ I+L  F+P+ A K+ D L VA E
Sbjct: 421 EANRYFANEEPWRLHKNNPERFFTVLYITLEILRRIGIMLLPFIPQSATKLLDSLVVAKE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           NR    + D ++K    L     PIFPR++
Sbjct: 481 NRFLHHISDLKIKEDTELPSPV-PIFPRYI 509


>gi|311113865|ref|YP_003985087.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945359|gb|ADP41653.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 515

 Score =  558 bits (1437), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/508 (52%), Positives = 360/508 (70%), Gaps = 8/508 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  G
Sbjct: 6   FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T K   D+NS  F+ M D L ISYD FIRTT+  H++  + +WK++ + GDIY   Y+G
Sbjct: 66  KTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDEAYY +DE  +  DGQ Y  +    V+W EEE YFFRLS Y DKLL  Y++   
Sbjct: 126 WYSVRDEAYYAEDETEE-RDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLELYKNEG- 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           ++ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 184 YVFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGY- 242

Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            N DG    K+WPADLH+IGKDI RFH+IYWPAFL SA L LPK+VF HGF+L  GEK+S
Sbjct: 243 PNTDGELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNGEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP +++   G+D +R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  R
Sbjct: 303 KSVGNVVDPADLVAAFGLDQVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+ DG +PTPG FTE+D  IL+  S + + +R +   Q  HRAL ++ +++++ 
Sbjct: 363 SLSMVAKNCDGRVPTPGEFTEADRKILAGASALYEPVRADYDEQAFHRALERIWTVLADT 422

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-E 482
           + YF  Q+PW L+K    +R +TVLYVT+EV+RQ+AIL+Q  +P    K+ D+L VA+ E
Sbjct: 423 NAYFAEQEPWTLRKNGEFERMNTVLYVTLEVVRQVAILMQPVMPGSMEKLLDLLGVAEGE 482

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F +L + L  G  L     P+FPR+
Sbjct: 483 ERLFAALPKNLTAGKELPAP-TPVFPRY 509


>gi|120405753|ref|YP_955582.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119958571|gb|ABM15576.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 511

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 255/507 (50%), Positives = 348/507 (68%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTD HG K+A+ A  
Sbjct: 3   EPYYITTAIAYPNGDPHVGHAYEYIATDAVARFKRLDGFDVRFLTGTDVHGLKMAETAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV T      NS  F+ + + L IS+D FIRT++  H++  + +W+++ D GD+Y G Y
Sbjct: 63  LGVPTAELARSNSDVFQRLQEKLHISFDRFIRTSDPDHYEASKAIWRRMVDAGDVYLGKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E    A G +       PV W EEE YFFRLSAY D+LL+ Y  H
Sbjct: 123 SGWYSVRDERFFTEAETSVDAAGVRIATETGTPVTWTEEETYFFRLSAYADRLLALYADH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV+SFV  GL+DLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 183 PEFIEPEVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D       ++WPADLH++GKDI+RFH +YWPAFL+SA + LPKKVF HGF+L++GEK+
Sbjct: 243 FPDTDSELFTRYWPADLHMVGKDIIRFHTVYWPAFLMSAGIELPKKVFVHGFLLNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYF +RE+  G+DG Y +D +  R+NADLAN  GNL  
Sbjct: 303 SKSVGNVVDPVNLVDTFGLDQVRYFFLREVPFGQDGSYSEDAIIGRINADLANEFGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+ DG++P PGAFT  D  +L+    +L+ +R + +   +H AL  + S++  
Sbjct: 363 RSLSMVAKNLDGVVPQPGAFTAEDSEMLAAADALLERVRRHFEATAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF AQ+PW L+KT+P R +TVLY T+EV+R  A+L Q  +P  A K+ D+L    + 
Sbjct: 423 ANRYFSAQEPWVLRKTDPARFATVLYTTLEVVRIAALLSQPVMPDAAAKLLDLLGQPADR 482

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F ++  RL PG  L      +FPR+
Sbjct: 483 RAFTAIGTRLAPGTALPSPTG-VFPRY 508


>gi|300741759|ref|ZP_07071780.1| methionine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380944|gb|EFJ77506.1| methionine--tRNA ligase [Rothia dentocariosa M567]
          Length = 515

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/508 (52%), Positives = 359/508 (70%), Gaps = 8/508 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  G
Sbjct: 6   FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T K   D+NS  F+ M D L ISYD FIRTT+  H++  + +WK++ + GDIY   Y+G
Sbjct: 66  KTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDEAYY +DE  +  DGQ Y  +    V+W EEE YFFRLS Y DKLL  Y++   
Sbjct: 126 WYSVRDEAYYAEDETEE-RDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLDLYKNEG- 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           ++ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 184 YVFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGY- 242

Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            N DG    K+WPADLH+IGKDI RFH+IYWPAFL SA L LPK+VF HGF+L  GEK+S
Sbjct: 243 PNTDGELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNGEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP +++   G+D +R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  R
Sbjct: 303 KSVGNVVDPADLVAAFGLDQVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+ DG +P PG FTE+D  IL+  S + + +R +   Q  HRAL ++ +++++ 
Sbjct: 363 SLSMVAKNCDGRVPVPGEFTEADRKILAGASALYEPVRADYNEQAFHRALERIWTVLADT 422

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-E 482
           + YF  Q+PW L+K    +R +TVLYVT+EV+RQ+AIL+Q  +P    K+ D+L VA+ E
Sbjct: 423 NAYFAEQEPWTLRKNGEFERMNTVLYVTLEVVRQVAILMQPVMPNSMEKLLDLLGVAEGE 482

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F +L + L  G  L     P+FPR+
Sbjct: 483 GRLFAALPKNLTAGKELPAP-TPVFPRY 509


>gi|220926667|ref|YP_002501969.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951274|gb|ACL61666.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 515

 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/510 (52%), Positives = 361/510 (70%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  I+TAI+YPN  PHIGHAYE+I  D +ARF R+DG DV FTTGTDEHG KI + A  
Sbjct: 4   ERFTITTAISYPNGAPHIGHAYEVIATDAIARFKRIDGYDVFFTTGTDEHGLKIQQTAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + FVD  +  FR MA+ L+ S+D FIRTT+  H    + LW+++ + GDIY   Y
Sbjct: 64  AGVTPRAFVDAMAPRFRAMAEALNCSFDRFIRTTDPDHVAASQALWRRMEEAGDIYLSKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDEAYY++ E+  G DG +       PV+W+EEE YFFRLSAY D+LL++Y  +
Sbjct: 124 SGWYSVRDEAYYDESELVLGPDGVRCAERTGTPVEWVEEESYFFRLSAYADRLLAHYAEN 183

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV+SGL+DLS+SR TFDWG+ +P  P ++MYVW+DALTNY+T+ G
Sbjct: 184 PDFIGPETRRNEVVSFVRSGLQDLSVSRTTFDWGVPVPGAPGHVMYVWVDALTNYITSCG 243

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D  + + WPADLHVIGKDI+RFHA+YWPAFL+SA + LPK+VF HGF+L +GEK+
Sbjct: 244 FPDEGD-PRWRHWPADLHVIGKDIIRFHAVYWPAFLMSAGVALPKRVFGHGFLLSRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP+E+    GVD LRYF++RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 303 SKSLGNVVDPVELAGLYGVDPLRYFVLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++MI ++  G +P PGA  E+D ++L+    +    R  M +  +H ALA++ ++V+E
Sbjct: 363 RSLTMIARNCGGAVPEPGALIEADRALLAAADALPAAARAAMTDYALHHALAEIWAVVAE 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT E +R + IL+Q FVP  A K+ D+L    + 
Sbjct: 423 ANRYFAGQEPWTLRKTDPARMGTVLYVTAETLRAIGILVQPFVPAAAAKLLDLLATPKQA 482

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           R    + +  RL PG  L     PIFPRF+
Sbjct: 483 RGLAQVGEGNRLVPGTALPAP-SPIFPRFV 511


>gi|182678510|ref|YP_001832656.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634393|gb|ACB95167.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 530

 Score =  555 bits (1430), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 255/511 (49%), Positives = 359/511 (70%), Gaps = 4/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R + Y++TAI Y N  PHIGHAYE +  D + RF RLDG DVLF TG DEHGQK+ +
Sbjct: 15  MAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVLFVTGMDEHGQKMQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +   D+ +  F  M   LD   DD +RTTE RHH   + +W +++  GDIY
Sbjct: 75  TAARDHITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAAQEIWNRMAANGDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWYS+RDEA++++ E+ +G +G        PV+W+EEE Y+F+LSAYQ++LL++Y
Sbjct: 135 LSKYPGWYSVRDEAFFDEGELTEGPNGTKLAPTGAPVEWVEEESYYFKLSAYQERLLAHY 194

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP+FI P + RNE++SFV+ GL DLS+SR TFDWGI +P D +++MYVW+DALTNY+T
Sbjct: 195 QAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKHVMYVWVDALTNYIT 254

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D  +  +A FWPAD HVIGKDI RFHAIYWPAFL+SA + LPK++  HGF+ ++G
Sbjct: 255 ATGFPDA-EAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALPKQIVVHGFLFNRG 313

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP+ +IE  G+D  RYF +RE+  G+DG Y  + +  R NADLAN +GN
Sbjct: 314 EKMSKSVGNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIVNRTNADLANDLGN 373

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G +P PGAF+E+D++IL +   ++++ R+ MQ+  +H  L ++  +
Sbjct: 374 LAQRSLSMLAKNCGGKVPQPGAFSEADKAILDLSRALVEKSRDLMQDFSLHLILGEIWRV 433

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF  ++PW  +KT+P R  T+LYVT EV+R++AIL Q F+P+ A+K+ D L VA
Sbjct: 434 VGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIPQSASKLLDSLGVA 493

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
            E R F  +++   L PG +L  T  PIFPR
Sbjct: 494 AEARLFIHVEEGPDLPPGTVL-PTPVPIFPR 523


>gi|145222520|ref|YP_001133198.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315442968|ref|YP_004075847.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215006|gb|ABP44410.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261271|gb|ADT98012.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 514

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 253/504 (50%), Positives = 348/504 (69%), Gaps = 2/504 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTD HG K+A+ A   GV
Sbjct: 6   YVTTAIAYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDVHGLKMAETAARLGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T      NS  F+ + + L++S+D FIRT++  H++  + +W ++ D GD+Y   YSGW
Sbjct: 66  PTAELARSNSDVFQRLQEKLNVSFDRFIRTSDADHYEASKAIWTRMVDAGDVYLDKYSGW 125

Query: 128 YSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+RDE ++ + E   GADG +       PV W EEE YFFRLSAY D+LL+ Y   P+F
Sbjct: 126 YSVRDERFFTEAETSIGADGVRIATETGTPVTWTEEETYFFRLSAYTDRLLALYAERPDF 185

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE++SFV  GL+DLS+SR TFDWG+ +P  P ++MYVW+DALTNYLT  G+ D
Sbjct: 186 IEPEVRRNEIVSFVSGGLRDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTGVGFPD 245

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
               +  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LPKKVF+HGF+ ++GEK+SKS
Sbjct: 246 TDSETFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPKKVFAHGFLFNRGEKMSKS 305

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP +++E  GVD LRYFL+RE++ G+DG Y +DG+  R+NADLAN  GNL  RS+
Sbjct: 306 VGNVVDPNDLVETFGVDQLRYFLLREVSFGQDGSYSEDGIIARINADLANEFGNLAQRSL 365

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM+ K+ DG +P PG FT  D ++L+    +L  +RE+     +H AL  + S++   +R
Sbjct: 366 SMVAKNLDGAVPEPGEFTAEDTAMLAAADDLLDRVREHYDATAMHLALEAIWSVLGAANR 425

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF AQ+PW L+KT+P R +TVLY T+EV+R  A+L Q  +P     + D+L   ++ R F
Sbjct: 426 YFSAQEPWVLRKTDPGRFATVLYTTLEVVRIAALLSQPVMPGTMATLLDLLGQPEDRRAF 485

Query: 487 QSLDQRLKPGFMLHKTFDPIFPRF 510
            ++  RL PG  L      +FPR+
Sbjct: 486 SAITVRLTPGTALPAPTG-VFPRY 508


>gi|323136445|ref|ZP_08071527.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398519|gb|EFY01039.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 520

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 259/494 (52%), Positives = 341/494 (69%), Gaps = 6/494 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER    ISTAI Y N  PHIGHAYE I  D  ARF RLDG DVLF TG DEHGQK+ +
Sbjct: 1   MSERPTYMISTAIPYANGAPHIGHAYERIATDAFARFKRLDGYDVLFVTGMDEHGQKMQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+ +  F  M + L+   DD +RTT++RH +T   +W+++   GDIY
Sbjct: 61  TAEKEGLTPQGLADRTAAQFARMGEALNARADDIVRTTQERHKETVLEIWRRMEANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY++ E+ +  +G+ +     PV+W+EEE +FFRLSAY  KLL++Y
Sbjct: 121 LSKYSGWYSVRDEAYYDESELTE-REGKKFAPTGTPVEWVEEESWFFRLSAYAGKLLAHY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALT 236
           E++P+FI P   RNE+I+FVK GL DLS+SR TFDWGI IP  PQ    ++MYVW+DALT
Sbjct: 180 EANPDFITPEHYRNEIIAFVKRGLSDLSVSRTTFDWGIPIPPSPQTTANHVMYVWVDALT 239

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T TG+L    G +A+FWPAD HVIGKDI RFHAIYWP+FLLSA  PLPK++  HGF+
Sbjct: 240 NYITATGWLTG-KGERARFWPADAHVIGKDITRFHAIYWPSFLLSAGAPLPKQIVVHGFL 298

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +GEK+SKSLGNV+DP+E+ E  GVD LRYF +REI  G+DG Y  + +  R+NADLAN
Sbjct: 299 FSRGEKMSKSLGNVVDPLELAERYGVDQLRYFFLREIPFGQDGNYSHEAIVNRINADLAN 358

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL  RS+SMI K+  G +P  G  T++D  IL+  +  L + R  M +   H ALA+
Sbjct: 359 DLGNLAQRSLSMIGKNCAGAVPKKGELTDADRDILAQAAIALDKARTAMNDYAPHHALAE 418

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  +V+E +RYF  ++PW  KKT+P R  T+LYVT E +R+LAI LQ F+P  A K+ D+
Sbjct: 419 IFRVVAEANRYFAGEEPWSKKKTDPARMETILYVTAETLRRLAIPLQPFIPDAAGKLLDL 478

Query: 477 LFVADENRCFQSLD 490
           L V  + R F   D
Sbjct: 479 LGVGPDERDFAHAD 492


>gi|209964481|ref|YP_002297396.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
 gi|209957947|gb|ACI98583.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
          Length = 520

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 257/512 (50%), Positives = 353/512 (68%), Gaps = 3/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R   Y++T I Y N  PHIGHAY  +  DV+ARF RLDG DV F TGTDEHGQK+ K
Sbjct: 1   MTGRTPYYLTTPIYYVNDAPHIGHAYTTVACDVMARFKRLDGFDVKFLTGTDEHGQKVQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AG+T K   D+NS NFR++A +L++S DDFIRTTE RH    + LW+++ + GD+Y
Sbjct: 61  SAELAGITPKQMADRNSENFRELARLLNVSNDDFIRTTEPRHVTAVQALWQRLQESGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G YSGWYS+RDEAY+ +DE+ +  DG+ +     PV+W+EE  YFFRLSA+Q++LL  Y
Sbjct: 121 LGSYSGWYSVRDEAYFGEDELVE-RDGRRFAPTGAPVEWVEEPSYFFRLSAWQERLLELY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ES P+FILP  +R+EV+SFV+ GL+DLS+SR TFDWGI +P D +++MYVW+DALTNY+T
Sbjct: 180 ESRPDFILPAGKRSEVVSFVRGGLRDLSISRTTFDWGIPVPGDEKHVMYVWLDALTNYIT 239

Query: 241 TTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             GY +  +G+   +FWPADLH++GKDILRFHA+YWPAFL++A L  P++VF+HG+   +
Sbjct: 240 AIGYPETGEGTLYGRFWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPRRVFAHGWWTVE 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKSLGNV+ P E+I   G+D  RYFL+REI  G DG + +  + +R+N +LAN  G
Sbjct: 300 GEKMSKSLGNVVKPEELIGTYGLDQTRYFLMREIPFGNDGDFSRRAMVQRINGELANDYG 359

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R +SM+ +  +G +P P AF E D  +L     +L  +R  +  Q  H+AL  +  
Sbjct: 360 NLVQRVLSMVQRYCEGRLPEPAAFGEPDNRLLDAAKGLLPAVRAELDQQAFHKALDTIWQ 419

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V + +RY D Q PW L+KT+  R  TVLY   E IR++A+L Q F+P+ + +I D L V
Sbjct: 420 VVGDANRYVDEQAPWSLRKTDTVRLGTVLYTLAETIRRVALLTQPFMPETSARILDQLVV 479

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           A + R F   D  L  G  L     P FPR++
Sbjct: 480 AADARSFADFDTVLAAGVQLPPP-QPAFPRYV 510


>gi|56551988|ref|YP_162827.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543562|gb|AAV89716.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 521

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 260/507 (51%), Positives = 356/507 (70%), Gaps = 3/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N
Sbjct: 3   QSFYITTAISYPNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +      D+ S +F+ M DV +ISYD FIRTTE  H+   + LWK ++D G IY G Y
Sbjct: 63  RDIEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y ++E+   + G+  + Q  PV+W  EE +FFRLSA+QDKLL+YYE+HP
Sbjct: 123 EGWYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT  GY
Sbjct: 183 DFIQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            DN +    ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+S
Sbjct: 243 PDNKERFD-RYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DPI++ +  GVD +RYFL+RE+  G+DG Y  + +  R+NADLAN  GNL  R
Sbjct: 302 KSVGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+S+I K+    +P+P      D++++   + +  ++   M N   ++AL  +   V E 
Sbjct: 362 SLSIIAKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y   Q PW ++KT+P RA T+LY T+E +RQLAIL +  +P   + + D+L    + R
Sbjct: 421 NLYISEQAPWTVRKTDPVRADTILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQR 480

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F++L   L PG  L K    +FPRF+
Sbjct: 481 DFRALSAPLVPGLPLPKPVG-VFPRFV 506


>gi|241761929|ref|ZP_04760014.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373609|gb|EER63181.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 521

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 260/507 (51%), Positives = 356/507 (70%), Gaps = 3/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N
Sbjct: 3   QSFYITTAISYPNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +      D+ S +F+ M DV +ISYD FIRTTE  H+   + LWK ++D G IY G Y
Sbjct: 63  RDIEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y ++E+   + G+  + Q  PV+W  EE +FFRLSA+QDKLL+YYE+HP
Sbjct: 123 EGWYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT  GY
Sbjct: 183 DFIQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            DN +    ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+S
Sbjct: 243 PDNKERFD-RYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DPI++ +  GVD +RYFL+RE+  G+DG Y  + +  R+NADLAN  GNL  R
Sbjct: 302 KSVGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+S+I K+    +P+P      D++++   + +  ++   M N   ++AL  +   V E 
Sbjct: 362 SLSIITKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y   Q PW ++KT+P RA T+LY T+E +RQLAIL +  +P   + + D+L    + R
Sbjct: 421 NLYISEQAPWTVRKTDPVRADTILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQR 480

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F++L   L PG  L K    +FPRF+
Sbjct: 481 DFRALSAPLVPGLPLPKPVG-VFPRFV 506


>gi|218510040|ref|ZP_03507918.1| methionyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 439

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 249/434 (57%), Positives = 336/434 (77%), Gaps = 3/434 (0%)

Query: 80  FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           F+ MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIYK  Y+GWYS+RDEAYY ++
Sbjct: 3   FQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIYKDSYAGWYSVRDEAYYQEN 62

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++YE++P+FI P ERRNEVISF
Sbjct: 63  ETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHYEANPDFIGPAERRNEVISF 122

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           VKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T TGY+++ +G +AK+WPAD
Sbjct: 123 VKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYITATGYIEDRNGPRAKYWPAD 182

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KGEK+SKSLGNV+DP+ ++  
Sbjct: 183 VHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPVNLVNH 242

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGNL SRS+SMI+K+ DG IP 
Sbjct: 243 FGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGNLASRSLSMIVKNCDGKIPE 302

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G  T+ D+++L+    +    RE+M  Q IHRALA +I++VSE DRYF  Q PW LKKT
Sbjct: 303 CGLLTDEDKAMLAQADALHASTREDMGKQQIHRALASIIAVVSETDRYFAGQAPWALKKT 362

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGF 497
           +P R  TVLYVT EV+RQ+AILLQ F+P  + K+ D++    + R F +L +  RL  G 
Sbjct: 363 DPVRMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAPADKRDFAALGEAGRLVAGT 422

Query: 498 MLHKTFDPIFPRFL 511
            L     P+FPR++
Sbjct: 423 PLEAP-TPVFPRYV 435


>gi|260752469|ref|YP_003225362.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551832|gb|ACV74778.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 521

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/507 (51%), Positives = 356/507 (70%), Gaps = 3/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N
Sbjct: 3   QSFYITTAISYPNGKPHIGHAYESIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +      D+ S +F+ M DV +ISYD FIRTTE  H+   + LWK ++D G IY G Y
Sbjct: 63  RDIEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y ++E+   + G+  + Q  PV+W  EE +FFRLSA+QDKLL+YYE+HP
Sbjct: 123 EGWYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT  GY
Sbjct: 183 DFIQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            DN +    ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+S
Sbjct: 243 PDNKERFD-RYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DPI++ +  GVD +RYFL+RE+  G+DG Y  + +  R+NADLAN  GNL  R
Sbjct: 302 KSVGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+S+I K+    +P+P      D++++   + +  ++   M N   ++AL  +   V E 
Sbjct: 362 SLSIIAKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y   Q PW ++KT+P RA ++LY T+E +RQLAIL +  +P   + + D+L    + R
Sbjct: 421 NLYISEQAPWTVRKTDPVRADSILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQR 480

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F++L   L PG  L K    +FPRF+
Sbjct: 481 DFRALSAPLVPGLPLPKPVG-VFPRFV 506


>gi|121601643|ref|YP_989109.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120613820|gb|ABM44421.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 519

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/506 (50%), Positives = 353/506 (69%), Gaps = 4/506 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YPN  PHIGHAY  I +D LARF RLD  +V F +GTDEHG K+ K A+   +
Sbjct: 6   YITTPIFYPNGAPHIGHAYNAIASDALARFQRLDRKNVFFLSGTDEHGLKMQKTAEALNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+NS  F+ M   L+ S DDFIRTTE+RHH TC+++WKK+   GDIY   Y+GW
Sbjct: 66  TPQQLADRNSALFQKMLTALNCSNDDFIRTTEERHHQTCQVMWKKMEANGDIYLDRYAGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+R E+YY   +     +G     +  +PV+W EEE YFFRLS Y D LL +YE +P+F
Sbjct: 126 YSVRQESYYEQKDTEIRENGIRCEKELGSPVEWNEEESYFFRLSRYGDALLEHYEKYPDF 185

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P ERRNE+ISFVKSGLKD+S+SR  F+WG+ +P++P+++MYVW+DALTNYLT  G+ D
Sbjct: 186 IGPNERRNEIISFVKSGLKDISISRINFNWGVSVPNNPEHVMYVWVDALTNYLTAIGFFD 245

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           N    K  +WPA++HV+GKDI+RFHAIYWPAFLLSA + LPK++F+HGF+ ++GEK+SKS
Sbjct: 246 N-TAQKRDYWPANVHVVGKDIIRFHAIYWPAFLLSAGIELPKRIFAHGFLFNRGEKMSKS 304

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP ++I+  GVD +RYF +RE+  G+DG Y  D L  RVNADLAN +GNL  RS+
Sbjct: 305 IGNVVDPFKMIDHYGVDQVRYFFLREVPFGQDGSYSHDSLVNRVNADLANDLGNLAQRSL 364

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM+ K+ D  +P P  F   D+ +L    + L+  R+ M  Q  H AL+ + S+++  +R
Sbjct: 365 SMLQKNCDAKVPVPDTFLTQDQQLLEQSLQALEVARQTMSCQAPHLALSAIFSVIANANR 424

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF +++PW L+K NP R  TVLYVTVE +R++ I+L  F+P+ A K+ D L + ++NR  
Sbjct: 425 YFASEEPWSLRKNNPKRFCTVLYVTVESLRRIGIMLLPFIPQSAAKLLDSLAIPEDNRLL 484

Query: 487 QSLDQ-RLKPGFMLHKTFDPIFPRFL 511
             +   R++ G  L    + IFPR++
Sbjct: 485 HHISSLRIEEGTDLPPP-EAIFPRYI 509


>gi|283457812|ref|YP_003362406.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133821|dbj|BAI64586.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 514

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/507 (52%), Positives = 356/507 (70%), Gaps = 6/507 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  G
Sbjct: 6   FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKLG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T K   D+NS  F+ M D L+ISYD FIRTT+  H+   + +WK++ + GDIY   Y+G
Sbjct: 66  KTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDEAYY +DE  +  DGQ Y  A    V+W EEE YFFRLS Y DKLL  Y ++  
Sbjct: 126 WYSVRDEAYYAEDET-EVRDGQRYAIATGTEVEWTEEESYFFRLSKYGDKLLELY-ANEG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNY+T  GY 
Sbjct: 184 FVYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITGLGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  +   AK+WPADLH+IGKDI RFH+IYWPAFL SA + LPK+VF HGF+L  GEK+SK
Sbjct: 244 DTDNELFAKYWPADLHLIGKDITRFHSIYWPAFLWSAGIELPKRVFGHGFLLVNGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  +++  G+DA+R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  RS
Sbjct: 304 SVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+  G +P  G FTE+D  IL   + + + +R +   Q  HRAL ++ +++++ +
Sbjct: 364 LSMVAKNCGGAVPAHGEFTEADRQILDEAAALYEPVRADFDEQAFHRALDRIWTVLADTN 423

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
            YF  Q+PW L+K    DR +TVLYVT+EV+RQ+A+LLQ  +P    K+  +L V + E+
Sbjct: 424 AYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGES 483

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F +L   L PG  L     P+FPR+
Sbjct: 484 RQFAALGTALVPGTELPAP-APVFPRY 509


>gi|325676285|ref|ZP_08155964.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325552846|gb|EGD22529.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 528

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/510 (50%), Positives = 355/510 (69%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R   Y++TAIAYPN  PHIGHAYE I +D +ARF RLDG DV F TGTDEHG K+ + A
Sbjct: 15  DRPPFYLTTAIAYPNGVPHIGHAYEYISSDAIARFKRLDGFDVFFLTGTDEHGLKMQQTA 74

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV  +    +NS  F+ M   L+ISYD FIRTT+  H +  + +W+++   GDIY  
Sbjct: 75  AKEGVDVRDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYLD 134

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA++ ++E     DG     +   PV+W EE  Y FRLS YQD+LL++YE
Sbjct: 135 TYSGWYSVRDEAFHAEEETTVLEDGTRLATETGTPVEWTEESNYTFRLSKYQDRLLAHYE 194

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE++SFVKSGLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYLT 
Sbjct: 195 ENPDFIAPATRRNEILSFVKSGLKDLSISRTTFDWGVPVPGDPAHVMYVWVDALTNYLTG 254

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ +       ++WPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGE
Sbjct: 255 AGFPNTDSAEFERYWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLFNKGE 314

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+N DLAN +GNL
Sbjct: 315 KMSKSVGNVVDPLAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNTDLANELGNL 374

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ D  +PTPG  T++D ++L+    +L+++R     Q +H  L  +  ++
Sbjct: 375 AQRSLSMVAKNCDAQVPTPGELTDADRALLAQADALLEKVRAEFDVQALHLGLEAIWHVL 434

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + IL+Q  +P  A KI D+L  A 
Sbjct: 435 GETNRYFSQQEPWVLRKTDPARMATVLYVTLEVVRIVGILVQPVMPGSAEKILDLLGQAP 494

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + R F  L  R+  G  L K    +FPR++
Sbjct: 495 DARAFVDLANRIVAGTPLPKPVG-VFPRYV 523


>gi|312115063|ref|YP_004012659.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220192|gb|ADP71560.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 523

 Score =  548 bits (1413), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 256/513 (49%), Positives = 354/513 (69%), Gaps = 3/513 (0%)

Query: 1   MKEREKLY--ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M E++K +  I+TAI+YPN +PHIGHAYE +  D +ARF RLDG  V F TG DEHG K+
Sbjct: 1   MTEQQKPHYTITTAISYPNGEPHIGHAYEAVATDAMARFKRLDGHPVFFLTGVDEHGLKM 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            + A   G+T     D+N+  F +M + LD+SYDDFIRTTE RHH++   +W+++   GD
Sbjct: 61  KQTAAKEGITPTELADRNTAKFIEMLEQLDVSYDDFIRTTEPRHHESVAEIWRRMEKAGD 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY   Y GWYS+RDEA+Y + E   G +G     Q  PV+W EE+ YFFRLS Y+ KLL 
Sbjct: 121 IYLAGYKGWYSVRDEAFYAESETVLGGNGIRLGPQGTPVEWTEEQTYFFRLSKYEKKLLK 180

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +YE +P FI+P ERRNEV+SFVK GL+DLS+SR T DWGI +PD P +I+YVW+DALTNY
Sbjct: 181 FYEENPGFIMPAERRNEVVSFVKGGLQDLSISRTTLDWGIPVPDAPGHIIYVWVDALTNY 240

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  G+      +  + WPA +H+IGKDI RFHA+YWPAFL+SA LPLP++VF HGF+ +
Sbjct: 241 ITAAGFPKIRSKAWKERWPAQVHIIGKDITRFHAVYWPAFLMSAKLPLPERVFGHGFLYN 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +GEK+SKS+GNV+ P ++++  GVD +RY+ +RE+  G+DG    + +  R+NADLAN +
Sbjct: 301 RGEKMSKSVGNVVAPKDLVDAYGVDQVRYYFLREVPFGQDGNITHEQMVNRINADLANDL 360

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL  RS+SMI K+  G IP P     +DE IL+  + +L+  RE +  Q  H+AL  + 
Sbjct: 361 GNLAQRSLSMIAKNCAGTIPEPSETDAADEPILAASAALLEANREAIDQQAPHKALDAIW 420

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V++ ++YF  Q+PW LKKTNP R  TVL+ T EV+R++AIL Q ++P  + K+ D L 
Sbjct: 421 KVVADTNKYFAVQEPWALKKTNPARMGTVLWTTAEVVRRVAILAQPYMPSSSAKLLDQLG 480

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           VA E+R F +L   LK G  +  T   +FPR++
Sbjct: 481 VAAEDRSFDALAHTLKAGTKI-ATPQGVFPRYV 512


>gi|254820391|ref|ZP_05225392.1| methionyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 514

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 250/508 (49%), Positives = 355/508 (69%), Gaps = 6/508 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAI YPN  PHIGHAYE +  D +ARF RLDG DV F TGTDEHG K+ + A   G+
Sbjct: 5   YVTTAITYPNGDPHIGHAYEYVATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEGI 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W++++  GDIY   YSGW
Sbjct: 65  GTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKEIWRRMAAAGDIYLDTYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+RDE ++ + E     DG     +   PV W EE+ YFFRLSAY DKLL++YE++P+F
Sbjct: 125 YSVRDERFFVESETRLLDDGTRVAVETGAPVTWTEEQTYFFRLSAYADKLLAHYEANPDF 184

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFV  GL+DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT  GY D
Sbjct: 185 IAPEVRRNEVVSFVAGGLRDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGVGYPD 244

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SKS
Sbjct: 245 TDSEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSKS 304

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP+ +IEE GVD +RYFL+RE+  G+DG + ++ +  R+N DLAN +GNL  RS+
Sbjct: 305 VGNVVDPVALIEEFGVDQVRYFLLREVPFGQDGSFSEEAIITRINTDLANELGNLAQRSL 364

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K+  G++P PG FT +D  +L+    +L+ +R + ++Q +H AL  +  ++ E +R
Sbjct: 365 SMIAKNLGGVLPEPGEFTAADTELLATADGLLERLRASFESQAMHLALEAIWLMLGEANR 424

Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YF AQ+PW L+K+  +    R  TVLYVT E +R  A+L+Q  +P+ A  + D+L  A +
Sbjct: 425 YFSAQQPWVLRKSESEADQQRFRTVLYVTCEAVRIAALLVQPVMPESAGTLLDLLGQAQD 484

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F +L  RL PG +L      +FPR+
Sbjct: 485 QRTFAALGARLTPGTVLPPPTG-VFPRY 511


>gi|184200670|ref|YP_001854877.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580900|dbj|BAG29371.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 517

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/512 (50%), Positives = 348/512 (67%), Gaps = 5/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   Y +TAI+YPN  PHIGHAYE I AD L RF RLDG+   F TGTDEHGQK+ +
Sbjct: 1   MTEQTPFYATTAISYPNGAPHIGHAYEAIAADTLVRFQRLDGVATRFQTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +   D NS  FR+M D L ISYD FIRTT++ H    + LWK++   GDIY
Sbjct: 61  TAEKLGTTPRELADANSARFREMDDELGISYDRFIRTTDEDHAAASQELWKRMEANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
              Y+GWYS+RDEAYY +DE    ADGQ Y+      + W EEE YFFRLS YQD+LL  
Sbjct: 121 LDTYAGWYSVRDEAYYAEDETEVRADGQRYSIGTGTELTWTEEESYFFRLSRYQDRLLEL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y +  +F+ P  R +E+ SFV  GL+DLS+SR TFDWG+ +P +P ++MYVW+DALTNYL
Sbjct: 181 YRT--DFVQPETRSHEIASFVGGGLQDLSISRTTFDWGVPVPGNPDHVMYVWVDALTNYL 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  G+ D       +FWPA +H+IGKDI RFHA+YWPAFL+SA + LP+KVF+HGF+ ++
Sbjct: 239 TGLGFPDTDAPLFREFWPASVHLIGKDIARFHAVYWPAFLMSAGIELPRKVFAHGFLFNQ 298

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS+GNVIDP  ++EE G+D LR+FL+RE+  G+DG Y  D +  R+N+DLAN +G
Sbjct: 299 GEKMSKSVGNVIDPHAMVEEYGLDQLRFFLLREVPFGQDGNYSHDAIAGRINSDLANDLG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL  RS+SM+ K+  G +P PG FT  D ++L+    V+ E R   +    HR L  V  
Sbjct: 359 NLAQRSLSMVAKNLGGEVPEPGEFTAEDLAMLAQAEDVVAEYRSAFEALAFHRGLESVWR 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++  +RYF AQ+PW L+KT+P+R +TVLYVT EV+R +A+L+Q  +P    ++ + L  
Sbjct: 419 VIASANRYFTAQEPWVLRKTDPERMATVLYVTAEVLRIVAVLVQPVMPGSMARLLEQLGQ 478

Query: 480 AD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + E R F +L  RL PG +L K    +FPR+
Sbjct: 479 PEGEARMFSALGTRLAPGTVLPKP-SGVFPRY 509


>gi|317506073|ref|ZP_07963901.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974]
 gi|316255645|gb|EFV14887.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974]
          Length = 514

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/508 (50%), Positives = 342/508 (67%), Gaps = 4/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   YI+TAI Y N  PH GHAYE I AD LARF RLDG +V F+ G DE+G K+ ++A+
Sbjct: 3   RTPYYITTAITYANGTPHFGHAYEFISADALARFARLDGKEVFFSMGMDEYGLKVQQSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ + FVD+ +  FR++   L  SYD FIRTTE  H    + LW+++S  GD+Y+G 
Sbjct: 63  KEGVSPQAFVDRVAERFRELHAALGSSYDRFIRTTEPAHAKASQELWRRMSANGDVYEGR 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+RDEA+Y ++E   G DG +       PV W EE  YFFRLSAYQD+LL  Y+ 
Sbjct: 123 YAGWYSVRDEAFYGEEETQLGEDGVRIAIPTGTPVAWTEESTYFFRLSAYQDRLLQLYQE 182

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HPEFI P  RRNE++SFV  GLKDLS+SR +F+WG+ +PD P ++MYVW+DALTNYLT  
Sbjct: 183 HPEFIGPESRRNEIVSFVSQGLKDLSISRSSFNWGVPVPDSPGHVMYVWVDALTNYLTAI 242

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D+   + AKFWPADL +IGKDI RFHA+YWPAFLLSA    PK+VF HGF+L+KG+K
Sbjct: 243 GFPDD-TANVAKFWPADLEIIGKDITRFHAVYWPAFLLSAGFEPPKRVFGHGFVLNKGQK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS G  +DP  ++E  G DA+R+F +REI  G+DG Y  + +  R NADL+NG+GNL 
Sbjct: 302 MSKSAGTGLDPFWLVETFGQDAVRFFALREIPYGQDGSYSDEAIVTRANADLSNGLGNLA 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R ++MI K++ G +P P AF+  DE++L     +L E R + + Q    ALA V  LVS
Sbjct: 362 QRCLTMIAKNFGGAVPRPAAFSAEDEALLGRADALLAEYRPHFEAQRPDLALAAVFDLVS 421

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + YF AQ PW LK+ + DR  +VLYVT EV+RQ AILLQ  +P+   K+ D+L     
Sbjct: 422 QANGYFTAQAPWTLKE-DLDRMGSVLYVTAEVVRQAAILLQPAMPQATEKLLDLLGQEAA 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F  L  R+ PG  L +    +FPR 
Sbjct: 481 ARSFADLASRISPGLALPEP-HAVFPRL 507


>gi|255327092|ref|ZP_05368168.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296309|gb|EET75650.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 514

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/507 (51%), Positives = 354/507 (69%), Gaps = 6/507 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  G
Sbjct: 6   FYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKLG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T K   D+NS  F+ M D L+ISYD FIRTT+  H+   + +WK++ + GDIY   Y+G
Sbjct: 66  KTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDEAYY +DE  +  DGQ Y       V+W EEE YFFRLS Y DKLL  Y ++  
Sbjct: 126 WYSVRDEAYYAEDET-EVRDGQRYAITTGTEVEWTEEESYFFRLSKYGDKLLELY-ANEG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           ++ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 184 YVYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  +    K+WPADLH+IGKDI RFH+IYWPAFL SA + LPK+VF HGF+L  GEK+SK
Sbjct: 244 DTDNELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGVELPKRVFGHGFLLVNGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  +++  G+DA+R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  RS
Sbjct: 304 SVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+  G +PT G FTE+D  IL   + + + +R +   Q  HRAL ++ +++++ +
Sbjct: 364 LSMVAKNCGGAVPTHGEFTEADRQILDQAAALYEPVRADFDEQAFHRALERIWTVLADTN 423

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
            YF  Q+PW L+K    DR +TVLYVT+EV+RQ+A+LLQ  +P    K+  +L V + + 
Sbjct: 424 AYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGDA 483

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F +L   L PG  L     P+FPR+
Sbjct: 484 RQFAALGTALVPGTELPAP-APVFPRY 509


>gi|312138647|ref|YP_004005983.1| methionine-tRNA ligase metg [Rhodococcus equi 103S]
 gi|311887986|emb|CBH47298.1| methionine-tRNA ligase MetG [Rhodococcus equi 103S]
          Length = 528

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 254/510 (49%), Positives = 354/510 (69%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R   Y++TAIAYPN  PHIGHAYE I +D +ARF RLDG +V F TGTDEHG K+ + A
Sbjct: 15  DRPPFYLTTAIAYPNGVPHIGHAYEYISSDAIARFKRLDGFEVFFLTGTDEHGLKMQQTA 74

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV  +    +NS  F+ M   L+ISYD FIRTT+  H +  + +W+++   GDIY  
Sbjct: 75  AKEGVDVRDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYLD 134

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA++ ++E     DG     +   PV+W EE  Y FRLS YQD+LL++YE
Sbjct: 135 TYSGWYSVRDEAFHAEEETTVLEDGTRIATETGTPVEWTEESNYTFRLSKYQDRLLAHYE 194

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE++SFVKSGLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYLT 
Sbjct: 195 ENPDFIAPATRRNEILSFVKSGLKDLSISRTTFDWGVPVPGDPAHVMYVWVDALTNYLTG 254

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ +       ++WPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGE
Sbjct: 255 AGFPNTDSAEFERYWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLFNKGE 314

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+N DLAN +GNL
Sbjct: 315 KMSKSVGNVVDPLAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNTDLANELGNL 374

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ D  +PTPG  T++D ++L+    +L ++R     Q +H  L  +  ++
Sbjct: 375 AQRSLSMVAKNCDAQVPTPGELTDADRALLAQADALLGKVRAEFDVQALHLGLEAIWHVL 434

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + IL+Q  +P  A KI D+L  A 
Sbjct: 435 GETNRYFSQQEPWVLRKTDPARMATVLYVTLEVVRIVGILVQPVMPGSAEKILDLLGQAP 494

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + R F  L  R+  G  L K    +FPR++
Sbjct: 495 DARAFVDLANRIVAGTPLPKPVG-VFPRYV 523


>gi|83311547|ref|YP_421811.1| methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946388|dbj|BAE51252.1| Methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 516

 Score =  545 bits (1404), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/513 (50%), Positives = 348/513 (67%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K
Sbjct: 1   MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  GVT +   DQNS NFR++A +L  + DDFIRTTE RH   C+ LW K+  KGDIY
Sbjct: 61  SAEAFGVTPQALADQNSANFRELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWYS+RDEA+Y +DE+ KGADG        PV+W++E  YFFRLSA+QD+LL +Y
Sbjct: 121 LGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVKEPSYFFRLSAWQDRLLRWY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+ + P  RRNEV+SFVK GL+DLS+SR +F WGI +P D  +IMYVW+DALTNY+T
Sbjct: 181 EDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D   G  A++WP  +H++GKDI+RFHA+YWPAFL++A+LP PK+VF+HG+  ++G
Sbjct: 241 AVGYPDT-TGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKS+GNVIDP+ +IE  G+D +RYFL+RE+  G DG +    +  R+N++LAN  GN
Sbjct: 300 QKISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV RS+SMI K+  G+ P     T+ D+ +L     +L ++R+ M  QL H A+  +  +
Sbjct: 360 LVQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKVRDAMDRQLYHEAIEAIWVV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V   + Y D Q PW LKKT+P R  TVL+V  E IR LA+L Q F+P  + +I D L V 
Sbjct: 420 VRAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVP 479

Query: 481 DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F        LK G  L  T   +FPR++
Sbjct: 480 EAERSFAFFGPGHALKAGISL-PTPQGVFPRYV 511


>gi|319408565|emb|CBI82218.1| Methionyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 519

 Score =  545 bits (1403), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 255/510 (50%), Positives = 355/510 (69%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I +D LARF RLDG DV F +GTDEHG K+ +AA+
Sbjct: 2   RDTYYITTPIFYPNGAPHIGHAYNAIASDSLARFQRLDGKDVFFLSGTDEHGLKMQQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M   L+ S DDFIRTTE+RHH TC+ +WKK+   GDIY   
Sbjct: 62  ALNITPQQLADRNSAIFQKMLTKLNCSNDDFIRTTEERHHRTCQAIWKKMEANGDIYLDR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R E+YY + +   G DG     +  +PV+W EEE YFF+LS Y+  LL +YE 
Sbjct: 122 YAGWYSVRQESYYEEKDTQIGEDGIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+ISF+KSGLKD+S+SR  F+WG+ +P++ +++MYVW+DALTNYLT  
Sbjct: 182 YPDFIAPNERRNEIISFIKSGLKDISISRTNFNWGVGVPNNSKHVMYVWVDALTNYLTAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +  N    K  FW A  H+IGKDI+RFHAIYWPAFL+SA + LPK++F+HGF+L++G K
Sbjct: 242 DFF-NEISKKRHFWSASTHIIGKDIIRFHAIYWPAFLMSAGIELPKRIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+I+  G+D +RYF +RE+  G+DG Y+ +    R+ ADL N +GNL 
Sbjct: 301 MSKSVGNVVDPFEIIDRYGLDQVRYFFLREVPFGQDGSYNHESFVNRITADLVNDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ D  IP P  F   DE +L    +V++  R+ M  Q  H AL+ + S+V+
Sbjct: 361 QRSLSMIQKNCDAKIPAPTDFLAQDEQLLEQSLQVIEVARQAMSRQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF +++PW L K+NP+R  TVLYVT+EV+R++ I+L  F+P+ A K+ D L +A E
Sbjct: 421 DANRYFASEEPWSLCKSNPERFFTVLYVTLEVLRRIGIMLLPFIPQSAAKLLDSLAIAKE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D ++K G  L     PIFPR++
Sbjct: 481 DRLLHHISDSKIKEGENLPLPV-PIFPRYV 509


>gi|118469128|ref|YP_889680.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170415|gb|ABK71311.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 515

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 253/511 (49%), Positives = 356/511 (69%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAIAYPN  PHIGHAYE I  D +ARF RLDG DV + TGTD HGQK+A+ A  
Sbjct: 3   EPFYITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+       +NS  F+ + + L+IS+D FIRT++  H++  + +WK+++D GDIY   Y
Sbjct: 63  EGIPAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWYS+RDE ++ ++E  +  DG     +   PV W EE+ YFFRLSAY D+LL+ YE H
Sbjct: 123 KGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++SFV  GLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 183 PEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D    S  ++WPADLH+IGKDI+RFH +YWPAFL+SA LPLPK++F+HG++L++GEK+
Sbjct: 243 FPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLPLPKRIFAHGWLLNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYFL+RE+  G+DG Y++D +  RVNADLAN +GNL  
Sbjct: 303 SKSIGNVVDPVNLVDTFGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+    +P PG FT+ D ++L+    +L+ +RE+     +H AL  + S++  
Sbjct: 363 RSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K++      R  TVLY T+EV+R  ++LLQ  +P+   K+ D+L  
Sbjct: 423 ANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQ 482

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F ++  R+KPG  L      IFPR+
Sbjct: 483 PTDERDFSAIANRIKPGTSLPAP-SGIFPRY 512


>gi|301598374|pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598375|pdb|2X1L|B Chain B, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598376|pdb|2X1L|C Chain C, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598377|pdb|2X1M|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine
          Length = 524

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 253/511 (49%), Positives = 356/511 (69%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAIAYPN  PHIGHAYE I  D +ARF RLDG DV + TGTD HGQK+A+ A  
Sbjct: 12  EPFYITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAK 71

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+       +NS  F+ + + L+IS+D FIRT++  H++  + +WK+++D GDIY   Y
Sbjct: 72  EGIPAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAY 131

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWYS+RDE ++ ++E  +  DG     +   PV W EE+ YFFRLSAY D+LL+ YE H
Sbjct: 132 KGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEH 191

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++SFV  GLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 192 PEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 251

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D    S  ++WPADLH+IGKDI+RFH +YWPAFL+SA LPLPK++F+HG++L++GEK+
Sbjct: 252 FPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLPLPKRIFAHGWLLNRGEKM 311

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYFL+RE+  G+DG Y++D +  RVNADLAN +GNL  
Sbjct: 312 SKSIGNVVDPVNLVDTFGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQ 371

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+    +P PG FT+ D ++L+    +L+ +RE+     +H AL  + S++  
Sbjct: 372 RSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGA 431

Query: 424 VDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K++      R  TVLY T+EV+R  ++LLQ  +P+   K+ D+L  
Sbjct: 432 ANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQ 491

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F ++  R+KPG  L      IFPR+
Sbjct: 492 PTDERDFSAIANRIKPGTSLPAP-SGIFPRY 521


>gi|262201453|ref|YP_003272661.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262084800|gb|ACY20768.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 523

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/506 (52%), Positives = 345/506 (68%), Gaps = 5/506 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAYPN  PHIGHAYE I ADVLARFHRLDG DV F TGTD HGQK+ + A+  G+
Sbjct: 18  YITTAIAYPNGAPHIGHAYEYISADVLARFHRLDGYDVRFLTGTDVHGQKMQQTAEKEGI 77

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ + D L  SY  FIRT++  H      +W+++SD GDIY   YSGW
Sbjct: 78  PTAELARRNSDRFQALQDRLGSSYHRFIRTSDDDHKRASEAIWQRMSDNGDIYLDKYSGW 137

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           Y +RDE +Y D E      G+        V  W EEE YFFRLS YQDKLL  YES P+F
Sbjct: 138 YDVRDETFYADSETSVNEAGERVATDTGHVLTWTEEETYFFRLSNYQDKLLELYESDPDF 197

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFVK GL DLS+SR TFDWG+ +P  P ++MYVW+DALTNYLT  G+ D
Sbjct: 198 IGPDVRRNEVVSFVKGGLNDLSISRTTFDWGVPVPAHPDHVMYVWVDALTNYLTGAGFPD 257

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           + + +  ++WPADLH+IGKDI+RFH +YWPAFL+SA + LPK+VF HGF+L+KGEK+SKS
Sbjct: 258 D-EQTLRRYWPADLHIIGKDIIRFHCVYWPAFLMSAGIDLPKRVFVHGFLLNKGEKMSKS 316

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  +I E G+D +RYF +RE++ G+DG Y  D +  R+NADLAN  GNL  R++
Sbjct: 317 VGNVLDPDALIAEFGLDPVRYFFLREVSYGQDGSYSTDAIISRINADLANDFGNLAQRTL 376

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K +DG +P PG + ++D  +L+    +L  +R +++ Q IH AL  + S++ E +R
Sbjct: 377 SMIGKYFDGALPAPGVYLDADTELLARADALLDTVRAHIEVQAIHLALEAMWSVLGETNR 436

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--R 484
           Y  AQ+PW+L KT+  R  TVLYV  EV+R +A+L Q  +P    K+ D+L V D    R
Sbjct: 437 YISAQEPWKLAKTDLGRTGTVLYVCAEVVRIVALLSQPVMPASTAKLLDLLGVDDSGAAR 496

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            F ++  RL PG  L K   PIFPR+
Sbjct: 497 QFSAVTDRLAPGTTLPKP-TPIFPRY 521


>gi|118465949|ref|YP_880395.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118167236|gb|ABK68133.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 519

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 251/509 (49%), Positives = 348/509 (68%), Gaps = 6/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAI YPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A   G
Sbjct: 4   FYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   YSG
Sbjct: 64  IGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDE ++ + E     DG    A+   P+ W EE+ YFFRLSAY DKLL++YE++P+
Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEANPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT  GY 
Sbjct: 184 FIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SK
Sbjct: 244 DTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN++DPI +++  GVD LRYFL+RE+  G+DG Y KD +  R+N DLAN +GNL  RS
Sbjct: 304 SVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTKDAIITRINTDLANELGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SMI K+   ++P PG FT  D  +L     +L  +R +  +Q +H  L  +  ++ E +
Sbjct: 364 LSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASFDSQAMHLGLEAIWLMLGEAN 423

Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +YF AQ+PW L+K+  +    R  TVLYVT EV+R  A+L+Q  +P  A K+ D+L    
Sbjct: 424 KYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPDSAGKLLDLLGQGQ 483

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + R F +L  RL PG +L      +FPR+
Sbjct: 484 DRRAFDALGARLAPGTVLPPPTG-VFPRY 511


>gi|41407070|ref|NP_959906.1| methionyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395421|gb|AAS03289.1| MetS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 519

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 250/509 (49%), Positives = 349/509 (68%), Gaps = 6/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAI YPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A   G
Sbjct: 4   FYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   YSG
Sbjct: 64  IGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDE ++ + E     DG    A+   P+ W EE+ YFFRLSAY DKLL++YE++P+
Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEANPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT  GY 
Sbjct: 184 FIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SK
Sbjct: 244 DTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN++DPI +++  GVD LRYFL+RE+  G+DG Y +D +  R+N DLAN +GNL  RS
Sbjct: 304 SVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTEDAIITRINTDLANELGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SMI K+   ++P PG FT  D  +L     +L  +R +  +Q +H  L  +  ++ E +
Sbjct: 364 LSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASFDSQAMHLGLEAIWLMLGEAN 423

Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +YF AQ+PW L+K+  +    R  TVLYVT EV+R  A+L+Q  +P+ A K+ D+L    
Sbjct: 424 KYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPESAGKLLDLLGQGQ 483

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + R F +L  RL PG +L      +FPR+
Sbjct: 484 DRRAFDALGARLAPGTVLPPPTG-VFPRY 511


>gi|254774038|ref|ZP_05215554.1| methionyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 519

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 250/509 (49%), Positives = 349/509 (68%), Gaps = 6/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAI YPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A   G
Sbjct: 4   FYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAAEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   YSG
Sbjct: 64  IDTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDE ++ + E     DG    A+   P+ W EE+ YFFRLSAY DKLL++YE++P+
Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEANPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT  GY 
Sbjct: 184 FIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SK
Sbjct: 244 DTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN++DPI +++  GVD LRYFL+RE+  G+DG Y +D +  R+N DLAN +GNL  RS
Sbjct: 304 SVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTEDAIITRINTDLANELGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SMI K+   ++P PG FT  D  +L     +L  +R +  +Q +H  L  +  ++ E +
Sbjct: 364 LSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASSDSQAMHLGLEAIWLMLGEAN 423

Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +YF AQ+PW L+K+  +    R  TVLYVT EV+R  A+L+Q  +P+ A K+ D+L    
Sbjct: 424 KYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPESAGKLLDLLGQGQ 483

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + R F +L  RL PG +L      +FPR+
Sbjct: 484 DRRAFDALGARLAPGTVLPPPTG-VFPRY 511


>gi|308177197|ref|YP_003916603.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744660|emb|CBT75632.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 516

 Score =  538 bits (1387), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/510 (49%), Positives = 346/510 (67%), Gaps = 3/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+TAI+YPN  PHIGHAYE++  DV+ARF RLDG DV F TGTDEHGQK+ + A
Sbjct: 4   QQKPFYITTAISYPNGTPHIGHAYEVVATDVMARFKRLDGYDVFFMTGTDEHGQKMMQTA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   +T      +NS  F+ M D L  SYD FIRTT+  HH   + LW+++    DIY  
Sbjct: 64  EKLEITPAQLAQRNSDAFQSMNDELGTSYDRFIRTTDADHHAAAQELWRRMEANDDIYLD 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y+GWYS+RDEA+Y +++     DG  Y A+ +  V W EEE YFFRLS YQDKLL YY 
Sbjct: 124 KYAGWYSVRDEAFYTEEQTEVREDGIRYAAETDTEVTWTEEESYFFRLSKYQDKLLDYYR 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +PEF  P  R NEV+ FV+SGL DLS+SR TFDWGI +P + +++MYVW+DALTNYLT 
Sbjct: 184 DNPEFGAPRSRFNEVVRFVESGLTDLSISRTTFDWGIPVPGNEKHVMYVWVDALTNYLTG 243

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D    S  K+WPAD+HVIGKDI RFHAIYWPAFL+SA LPLPK+V  HGF+ + G 
Sbjct: 244 VGFPDVDSASFKKYWPADVHVIGKDISRFHAIYWPAFLMSAKLPLPKRVMIHGFLHNNGV 303

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGN + P + +   G+D +RYF +RE+  G DG Y+ + +  R+N DLAN  GNL
Sbjct: 304 KMSKSLGNTVSPDDFVNRYGLDQVRYFFLREVPFGADGNYNHETIVARINGDLANNFGNL 363

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+  G++PTP   +E+D +IL    ++L+  RE    Q   +AL  V  ++
Sbjct: 364 AQRSLSMVAKNCGGVVPTPAELSEADNAILDAAGQLLEINREAYSRQEFSKALEAVWHVL 423

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + + YF  Q+PW+LKKT+P+R +TVLYVT+E++R++A+LLQ  +P+    + + L V +
Sbjct: 424 GDTNAYFAEQEPWKLKKTDPERMATVLYVTIEIVRKVALLLQPVLPQAMTSMLNALAVGE 483

Query: 482 EN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R F+S D  L PG  L     P+FPR+
Sbjct: 484 GSARNFESFDSALVPGTEL-PVPSPVFPRY 512


>gi|296169876|ref|ZP_06851488.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895432|gb|EFG75134.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 513

 Score =  538 bits (1386), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 247/508 (48%), Positives = 344/508 (67%), Gaps = 5/508 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAI YPN  PH+GHAYE +  D +ARF RLDG DV F TGTDEHG K+ + A   G
Sbjct: 4   FYVTTAITYPNGNPHVGHAYEYVATDAIARFKRLDGFDVRFLTGTDEHGLKMMETAAAEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   YSG
Sbjct: 64  IPTAELARRNSDVFQRLQEKLNISFDRFIRTTDPDHHEASQEIWRRMEAAGDIYLDSYSG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++Y+++PEF
Sbjct: 124 WYSVRDERFFVESETAVVEGTRVAVETGTPVTWTEEQTYFFRLSAYADKLLAHYDANPEF 183

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFV  GL+DLS+SR +FDWG+K+P  P +++YVW+DALTNYLT  GY D
Sbjct: 184 IAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPGHPDHVVYVWVDALTNYLTGVGYPD 243

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+SKS
Sbjct: 244 TDSELFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIDLPRRVFAHGFLLNRGEKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GN++DP  +++  GVD LRYFL+RE+  G+DG Y +D +  R N DLAN +GNL  RS+
Sbjct: 304 VGNIVDPDALVDTFGVDQLRYFLLREVPFGQDGSYSEDAIVTRTNTDLANELGNLAQRSL 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM+ K+ DG++P PG FT  D  +L V   +L  +R    NQ +H AL  +  ++   +R
Sbjct: 364 SMVAKNLDGIVPAPGEFTAEDTELLDVADGLLDRVRIEFDNQAMHLALEAIWLMLGAANR 423

Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YF AQ+PW L+K+  +    R +TVLY T E +R  A+L+Q  +P+ A K+ D+L  A E
Sbjct: 424 YFSAQQPWVLRKSESEADRKRFATVLYTTCEAVRIAALLVQPVMPESAGKLLDLLGQAPE 483

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F ++  RL PG  L      +FPR+
Sbjct: 484 RRGFDAVATRLAPGTALPAPTG-VFPRY 510


>gi|116671079|ref|YP_832012.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611188|gb|ABK03912.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 519

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 259/506 (51%), Positives = 342/506 (67%), Gaps = 3/506 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI YPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG KIA+ A   G
Sbjct: 9   FYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVFFLTGTDEHGMKIAQTADKEG 68

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K  VD+N+  ++     L ISYD FIRTT++ H+   + +WKK+   GDIY   Y G
Sbjct: 69  ITPKELVDRNAEIYKAAHAALGISYDRFIRTTDEDHYAASQAIWKKMEANGDIYLSKYEG 128

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+RDEAYY +DE     DG  Y+ + +  + W  EE YFFRLSAYQDKLL+ YE+HPE
Sbjct: 129 WYSVRDEAYYVEDETVVKEDGLRYSRETDTELTWTAEESYFFRLSAYQDKLLALYEAHPE 188

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F  P  R NEVISFVK GL+DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 189 FGAPQSRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGVGYP 248

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D    S  K+WPAD+HVIGKDI RFHAIYWPAFL+SA L LPK++  HGF+ + G K+SK
Sbjct: 249 DTESDSFKKYWPADVHVIGKDISRFHAIYWPAFLMSAGLELPKRIMIHGFLNNNGVKMSK 308

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+ P + + + G+D +R+F +RE+  G DG Y  + +  R+N+DLAN  GNL  RS
Sbjct: 309 SLGNVVAPSDFVAQYGLDQVRFFFLREVPFGADGSYSHEAIVGRMNSDLANNFGNLAQRS 368

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+ +G +P PGAFT  D ++L   + +L+  R   + Q   RAL  +  ++ + +
Sbjct: 369 LSMVAKNCEGRVPVPGAFTAEDSALLEQANGLLEAARAAFEKQEFSRALEAIWGVLGDTN 428

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENR 484
            YF  Q PW L+KT+ +R +TVLYVT+EV+R +AIL+Q  +PK +  + D L   D E R
Sbjct: 429 AYFAEQAPWVLRKTDVERMNTVLYVTLEVLRIVAILVQPVMPKASAALLDTLGQPDGEAR 488

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            F ++   L PG  L     PIFP++
Sbjct: 489 RFAAIATPLVPGTELPAP-SPIFPKY 513


>gi|260905420|ref|ZP_05913742.1| methionyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 573

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/473 (52%), Positives = 341/473 (72%), Gaps = 3/473 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAYPN   HIGHAYE I AD +ARF RLD  +V F TGTDEHG K+ +AA   G+
Sbjct: 4   YLTTAIAYPNGAIHIGHAYEYIAADTIARFKRLDNHEVFFATGTDEHGLKMLQAANKLGI 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K   D N++NFRD    L  ++D FIRTT++ H++  + +W+K+ + GDIY   Y+GW
Sbjct: 64  SPKELADDNAKNFRDTQLALGSTFDRFIRTTDEDHYEASKAIWRKLEEAGDIYLDTYAGW 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+RDEA+Y  DE  +  DG   + +    V W EEE YFFRLS YQDKLL  Y++HPEF
Sbjct: 124 YSVRDEAFYTQDET-EVVDGVRLSTETRTEVTWTEEESYFFRLSNYQDKLLELYKNHPEF 182

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV SFV SGLKDLS+SR TFDWG+ +P + +++MYVWIDALTNYLT  GY D
Sbjct: 183 IGPDSRRNEVASFVASGLKDLSVSRTTFDWGVPVPGNEKHVMYVWIDALTNYLTAAGYPD 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           + +    K+WPAD+H+IGKDI+RFH++YWPAFL+SA + LPK+V +HGF+ + GEK+SKS
Sbjct: 243 DQE-RLDKWWPADVHIIGKDIIRFHSVYWPAFLMSAGIELPKRVHAHGFLFNAGEKMSKS 301

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DPI++++  G+D LR+FL RE + G DG Y KD +  R N+DLAN  GNL  RS+
Sbjct: 302 VGNVVDPIDLVDAFGLDTLRFFLFREFSYGNDGSYTKDSIITRKNSDLANEYGNLAQRSL 361

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K+ D  +P PG  T+ DE++L++   V    R ++  Q +H  +     +++E +R
Sbjct: 362 SMIAKNCDAQVPQPGELTDDDEALLALARAVPDNARRHVDTQALHLYVEACWKVLTEANR 421

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           YF AQ+PW+LKKT+PDR +TVL+VT+EV+R ++IL+Q  +P+ A KI D+L V
Sbjct: 422 YFSAQEPWKLKKTDPDRMATVLWVTIEVVRIISILIQPVMPESAGKILDLLGV 474


>gi|288958659|ref|YP_003449000.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910967|dbj|BAI72456.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 519

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 256/515 (49%), Positives = 351/515 (68%), Gaps = 8/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  Y++T I Y N  PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K
Sbjct: 4   MAGPKTFYLTTPIYYVNDVPHIGHAYTTLACDVLARFMRLDGYDVKFLTGTDEHGQKVEK 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AG+  + F D+ SRNFRD+  +++ S DDFIRTTE RH  + + LW  + D+G+IY
Sbjct: 64  SAEKAGIAPQDFTDRVSRNFRDLVSLMNYSNDDFIRTTEPRHVKSVQALWTLLKDRGEIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+GWYS+RDEA+Y +DE+    +G+         +W+EE  YFF+LSA+QD+L+ +Y
Sbjct: 124 LGSYAGWYSVRDEAFYGEDELTTNPEGKKIAPTGAECEWVEEPSYFFKLSAWQDRLIEFY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  +RNEV++FVKSGLKDLS+SR TF WGI +P D  +IMYVW+DAL NY+T
Sbjct: 184 ERNPDFIAPAGKRNEVMAFVKSGLKDLSVSRTTFKWGIPVPGDDAHIMYVWLDALANYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D   G  AK+WPADLH++GKDILRFHA+YWPAFL++A L  PK+VF+HG+   +G
Sbjct: 244 AVGYPDT-TGDYAKYWPADLHMVGKDILRFHAVYWPAFLMAAGLQPPKRVFAHGWWTIEG 302

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGNVI P  ++   G+D  RYFL+RE+  G DG +    +  R+N +LAN  GN
Sbjct: 303 QKMSKSLGNVIAPETLVTTYGLDQTRYFLLREVPFGNDGDFSHKQMVNRINGNLANDYGN 362

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R +SMI K+    +PTPGAFTE+D+++L     +L  +R  ++ Q  H+AL  + ++
Sbjct: 363 LVQRVLSMIGKNCAAAVPTPGAFTEADQALLGPAYGLLDVVRAEIRAQAFHKALDAIWAV 422

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V + +RY D Q PW LKKT+P R +TVLYV  E IR LAIL Q  +P  + +I D+L + 
Sbjct: 423 VGDANRYVDEQAPWALKKTDPARMATVLYVLAETIRHLAILTQPVMPDASARILDLLALG 482

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDP----IFPRFL 511
            + R F +L      G ++  T  P    +FPR++
Sbjct: 483 PDARGFGTLGPS---GALVAGTPLPTPQGVFPRYV 514


>gi|296394638|ref|YP_003659522.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181785|gb|ADG98691.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 514

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 254/508 (50%), Positives = 339/508 (66%), Gaps = 4/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y++TAI Y N  PH GHAYE I AD  ARF RLDG DV F+ G DE+GQK+ ++A+
Sbjct: 3   RTPYYLTTAITYANGAPHFGHAYEFISADAFARFARLDGKDVFFSVGMDEYGQKVQQSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + FVD+ +  F ++   L  SYD FIRTTE  H  + + LW+++   GDIY+G 
Sbjct: 63  KEGISPQEFVDRVAERFLELHAALGSSYDRFIRTTEPGHTASVQELWRRMDANGDIYQGS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+RDEA+Y ++E   G DG +  +A   PV W EE  YFFRLSAYQD+LL+ YE 
Sbjct: 123 YTGWYSVRDEAFYGEEETCVGEDGVRIASATGTPVAWTEESTYFFRLSAYQDRLLALYEE 182

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HPEFI P  RRNE++ FV  GLKDLS+SR +F+WG+ +P DP+++MYVW+DALTNYLT  
Sbjct: 183 HPEFIGPDSRRNEIVRFVSQGLKDLSVSRSSFNWGVPVPGDPEHVMYVWVDALTNYLTAI 242

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+  +  G  AKFWPADL +IGKDI RFHA+YWPAFLLSA    PK+VF HGF+L+KG K
Sbjct: 243 GFPGDEAGV-AKFWPADLQIIGKDITRFHAVYWPAFLLSAGFAPPKRVFGHGFVLNKGHK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS G  +DP  +IE  G DA+R+F +REI  G+DG Y  + +  R NA+L+NG+GNL 
Sbjct: 302 MSKSAGTGLDPFWLIETFGQDAVRFFALREIPYGQDGSYSDEAIVTRANAELSNGLGNLA 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R ++MI K++ G +P PGA    DE++L+    +L   R +   Q    A+A V  +VS
Sbjct: 362 QRCLTMIAKNFGGTVPDPGALAAEDEALLAQADGMLAAYRPHFAAQRPDLAIAAVFDVVS 421

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + YF AQ PW LK+ +  R  T+LY T EV+RQ AILLQ  +P+ + K+ D+L  +  
Sbjct: 422 LANGYFTAQAPWTLKE-DLGRMGTILYTTAEVVRQAAILLQPAMPQASEKLLDLLGQSSG 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F  L  RL PG  L +    +FPR 
Sbjct: 481 ARMFADLPARLAPGLALPEP-KAVFPRL 507


>gi|217976728|ref|YP_002360875.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217502104|gb|ACK49513.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 519

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 247/508 (48%), Positives = 346/508 (68%), Gaps = 6/508 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI Y N  PHIGHAYE I  D +ARF RLDG + LF TG DEHGQK+ + A    
Sbjct: 6   FYITTAIPYANGAPHIGHAYERIATDAIARFKRLDGYETLFVTGMDEHGQKMQQTAAREN 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++     D+ +  F  M ++L+ S DD +RTTE RHH   + +WK++   GDIY   Y G
Sbjct: 66  LSPLQLADRTAAQFYAMGELLNASADDIVRTTEARHHAASQEIWKRMQASGDIYLSKYPG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEA+++D E+  G  G        PV+W+EEE Y+FRLSAYQ++LL+ Y   P+F
Sbjct: 126 WYSVRDEAFFDDSELTDGPGGSKLAPTGAPVEWVEEESYYFRLSAYQERLLALYRERPDF 185

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           + P + RNE+++FV+ GL DLS+SR TFDWG+ +P DP+++MYVW+DALTNY+T TG+ D
Sbjct: 186 VTPEKYRNEIVAFVERGLTDLSISRSTFDWGVPVPGDPKHVMYVWVDALTNYITGTGFPD 245

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                +AKFWPAD HVIGKDI RFHAIYWPAFL+SA L +PK++ +HGF+ ++GEK+SKS
Sbjct: 246 A-ASPRAKFWPADAHVIGKDITRFHAIYWPAFLMSAGLLVPKQIVTHGFLFNRGEKMSKS 304

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNVIDP  + +E GVD  RYFL+RE+  G+DG Y  + +  R NADLAN +GNL  RS+
Sbjct: 305 IGNVIDPFALAKEYGVDPFRYFLLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQRSL 364

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM+ K+  G++P+  A  E+DE++L     + Q+ R +M++  +H  LA++  +V E +R
Sbjct: 365 SMLAKNCGGVLPSSPALNETDEALLFQARALPQKARGHMRDYALHLILAEIWRVVGEANR 424

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  ++PW  +KT+P R  +VLYVTVEV+R +AI+ Q F+P    ++ D L VA + R F
Sbjct: 425 YFATEEPWVKRKTDPARMESVLYVTVEVLRIIAIMTQPFMPASMERLLDSLGVAKDARSF 484

Query: 487 QSLDQ---RLKPGFMLHKTFDPIFPRFL 511
              +    R   G +   T  P+FPR++
Sbjct: 485 ADAENFILRAPSGPLPAPT--PVFPRYV 510


>gi|294083928|ref|YP_003550685.1| methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663500|gb|ADE38601.1| Methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 516

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/514 (50%), Positives = 358/514 (69%), Gaps = 13/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N +PHIGHAY  +  DV+ARF RLDG +V F TGTDEHGQK+ KAAQ 
Sbjct: 4   KKFYITTPIYYVNDKPHIGHAYTTLACDVMARFKRLDGFEVKFLTGTDEHGQKVEKAAQV 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG + + F +  S+NFRD+   L+ S DDFIRTTE+RH   C+ LW+ + DKG I    Y
Sbjct: 64  AGTSPQEFTNAVSQNFRDLTTQLNFSNDDFIRTTEERHKLACQQLWRILLDKGYIRLDTY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY++RDEA+Y  DE+  G           PV+W+EE  YFF LS +QDKLL++YE++P
Sbjct: 124 AGWYAVRDEAFYTKDEIVDGK-----APSGAPVEWVEEPSYFFDLSKFQDKLLAFYEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  R NEV SFVK GL+DLS+SR +F WG+ +PDD  ++MYVW+DALTNY+T TG+
Sbjct: 179 DFVAPASRFNEVKSFVKGGLRDLSVSRASFKWGVPVPDDDAHVMYVWLDALTNYITATGW 238

Query: 245 -LDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +D   G+     K WPADLH++GKDILRFHA+YWPAFL++A+LPLPK+VF+HG+  ++G
Sbjct: 239 PVDGAFGNAETYEKLWPADLHMVGKDILRFHAVYWPAFLMAADLPLPKRVFAHGWWTNEG 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGNVIDP+ + E  G+D  RYFL+RE+  GKDG +    + +R+N+DLAN +GN
Sbjct: 299 QKISKSLGNVIDPVALSEIYGLDQTRYFLMREVPFGKDGDFSVQAMIQRMNSDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L  R +SMI K+ +G++P  P + +  D +IL+ C  +L ++R ++  Q  H AL  +  
Sbjct: 359 LSQRVISMIFKNCEGVMPALPVSPSPEDNAILTACDALLDQVRIHIDQQSFHEALRSIWD 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++  +RY D+Q PW LKKT+P R   VL V  E+IRQ AIL Q F+P+   KI D L V
Sbjct: 419 VIAAANRYVDSQAPWGLKKTDPARMQEVLAVLAEIIRQFAILTQPFMPQSTAKILDQLGV 478

Query: 480 ADENRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            ++ R F +L    RL  G ++ K  +P+FPRF+
Sbjct: 479 DEKARGFDTLAGQVRLATGHVIGKP-EPVFPRFV 511


>gi|240169909|ref|ZP_04748568.1| methionyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 516

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 252/514 (49%), Positives = 351/514 (68%), Gaps = 5/514 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+
Sbjct: 1   MKPLQPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGV T     +NS  F+ M + L+IS+D FIRTT+  H+   + +W+++   GD+Y
Sbjct: 61  AAAAAGVPTAQLARRNSDVFQRMQEALNISFDRFIRTTDPDHYAASQEIWRRMEAAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++Y
Sbjct: 121 LDNYSGWYSVRDERFFVESETQLVDGTRIAIETGTPVTWTEEQTYFFRLSAYADKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +HP+FI P  RRNEVISFV  GLKDLS+SR +F+WG+ +P+ P ++MYVW+DALTNYLT
Sbjct: 181 HAHPDFIAPEVRRNEVISFVSGGLKDLSVSRTSFNWGVPVPEHPDHVMYVWVDALTNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D    S  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+KVF+HGF+ ++G
Sbjct: 241 GAGYPDTGSESFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRKVFAHGFLHNRG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP+ +I+  GVD +RYFL+RE+  G+DG Y  + +  R+N DLAN +GN
Sbjct: 301 EKMSKSVGNVIDPVALIQAYGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G++P PG F ++D  +L+    +L  +R +   Q +H AL  +  +
Sbjct: 361 LAQRSLSMVAKNLGGVVPEPGEFCDADTELLATADGLLDRVRAHFDRQAMHLALEAIWLM 420

Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + + ++YF  Q+PW L+K+  +    R  T LY T EV+R  A+L+Q  +P+ A K+ D+
Sbjct: 421 LGDANKYFSTQQPWVLRKSESEADQARFRTTLYTTCEVVRIAALLVQPVMPESAAKMLDL 480

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L   D+ R F ++  RL PG  L      +FPR+
Sbjct: 481 LGQPDDRRAFSAVGTRLAPGTQLPPPTG-VFPRY 513


>gi|221229512|ref|YP_002502928.1| methionyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|219932619|emb|CAR70331.1| putative methionyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 537

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/509 (49%), Positives = 355/509 (69%), Gaps = 7/509 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAYPNA PHIGHAYE I  D +ARF RLDGLDV F TGTDEHG K+A+AA+ AGV
Sbjct: 5   YITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVRFLTGTDEHGLKVAQAAEAAGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ M + L IS+D FIRTT+  H+   + +W+++   GDIY G YSGW
Sbjct: 65  PTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWME-EEGYFFRLSAYQDKLLSYYESHPE 185
           YS+RDE ++ D E     +G     +   PV W E E+ YFFRLSAY DKLL++Y+++P+
Sbjct: 125 YSVRDERFFVDSETKLLDNGIRVAVETGTPVTWTEKEQTYFFRLSAYVDKLLAHYDANPD 184

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFV  GL+D S+SR +FDWG+++P+ P ++MYVWIDALTNYLT  G+ 
Sbjct: 185 FIGPEVRRNEVISFVSGGLEDFSISRTSFDWGVQVPEHPDHVMYVWIDALTNYLTGAGFP 244

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D       ++WPA+LH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ + GEK+SK
Sbjct: 245 DTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNHGEKMSK 304

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN++DP+ +++  GVD +RYFL+REI  G+DG Y ++ +  R+N DLAN  GNL  RS
Sbjct: 305 SVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLAQRS 364

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+  G++P P  FT +D ++L+    +L+ +R N   Q ++ AL  +  ++ E +
Sbjct: 365 LSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLGEAN 424

Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +YF +Q+PW L+K+  +    R  TVLY T EV+R  A+L+Q  +P+ A K+ D+L   +
Sbjct: 425 KYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLGQEE 484

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + R F ++  RL PG +L      +FPR+
Sbjct: 485 DQRAFTAVSVRLAPGTVLPPPTG-VFPRY 512


>gi|220913018|ref|YP_002488327.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859896|gb|ACL40238.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 519

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/511 (50%), Positives = 344/511 (67%), Gaps = 3/511 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   YI+TAI YPN  PHIGHAYE I  D +ARF RLDG DV+F TGTDEHG KIA+ 
Sbjct: 4   SEKTPFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQT 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  VD+N+  ++   + L I+YD FIRTT++ H+   + +WKK+   GDIY 
Sbjct: 64  AEKEGITPKELVDRNAEIYKAAHEALGITYDRFIRTTDEDHYAASQAIWKKMEANGDIYL 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYY 180
             Y GWYS+RDEA+Y +DE     DG  Y+ + +  V W  EE YFFRLSAYQDKLL+ Y
Sbjct: 124 DKYEGWYSVRDEAFYGEDETVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQDKLLALY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+ PEF  P  R NEVISFVK GL+DLS+SR TFDWG+ +P +  ++MYVW+DALTNYLT
Sbjct: 184 EAQPEFGAPQSRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNSNHVMYVWVDALTNYLT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       +FWPAD+HVIGKDI RFHAIYWPAFLLSA L LPK+V  HGF+ + G
Sbjct: 244 GVGYPDVDSEKFRRFWPADVHVIGKDISRFHAIYWPAFLLSAGLELPKRVMIHGFLHNNG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+ P + +E+ G+D +R+F +RE+  G DG Y+ + +  R+N+DLAN  GN
Sbjct: 304 VKMSKSLGNVVAPADFVEQYGLDQVRFFFLREVPFGADGSYNHEAIVGRMNSDLANNFGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G +PTPGAFT++D +IL     +L   R     Q   RAL  + ++
Sbjct: 364 LAQRSLSMVAKNCGGAVPTPGAFTDADTAILEQAGGLLDNARAAFDKQEFSRALEAIWAV 423

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + + YF  Q PW L+KT+ +R +TVLYVT+EV+R +AIL Q  +P    ++ D L   
Sbjct: 424 LGDTNAYFAEQAPWVLRKTDVERMNTVLYVTLEVLRIVAILAQPVMPGSTARLLDALGQP 483

Query: 481 D-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + R F ++  R+  G  L     P+FP++
Sbjct: 484 EGDARQFGAVATRIAAGTPLPAP-APVFPKY 513


>gi|15827034|ref|NP_301297.1| methionyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|25009393|sp|Q9CD55|SYM_MYCLE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13092581|emb|CAC29746.1| putative methionyl-tRNA synthase [Mycobacterium leprae]
          Length = 537

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/509 (48%), Positives = 354/509 (69%), Gaps = 7/509 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAYPNA PHIGHAYE I  D +ARF RLDGLDV F TGTDEHG K+A+AA+ AGV
Sbjct: 5   YITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVRFLTGTDEHGLKVAQAAEAAGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ M + L IS+D FIRTT+  H+   + +W+++   GDIY G YSGW
Sbjct: 65  PTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWME-EEGYFFRLSAYQDKLLSYYESHPE 185
           YS+RDE ++ D E     +G     +    V W E E+ YFFRLSAY DKLL++Y+++P+
Sbjct: 125 YSVRDERFFVDSETKLLDNGIRVAVETGTLVTWTEKEQTYFFRLSAYVDKLLAHYDANPD 184

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFV  GL+D S+SR +FDWG+++P+ P ++MYVWIDALTNYLT  G+ 
Sbjct: 185 FIGPEVRRNEVISFVSGGLEDFSISRTSFDWGVQVPEHPDHVMYVWIDALTNYLTGAGFP 244

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D       ++WPA+LH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ + GEK+SK
Sbjct: 245 DTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNHGEKMSK 304

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN++DP+ +++  GVD +RYFL+REI  G+DG Y ++ +  R+N DLAN  GNL  RS
Sbjct: 305 SVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLAQRS 364

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+  G++P P  FT +D ++L+    +L+ +R N   Q ++ AL  +  ++ E +
Sbjct: 365 LSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLGEAN 424

Query: 426 RYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +YF +Q+PW L+K+  +    R  TVLY T EV+R  A+L+Q  +P+ A K+ D+L   +
Sbjct: 425 KYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLGQEE 484

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + R F ++  RL PG +L      +FPR+
Sbjct: 485 DQRAFTAVSVRLAPGTVLPPPTG-VFPRY 512


>gi|326383789|ref|ZP_08205474.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197553|gb|EGD54742.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 523

 Score =  531 bits (1369), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/506 (50%), Positives = 348/506 (68%), Gaps = 5/506 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAIAYPN  PHIGHAYE I ADVLARF  LDG DV F +GTDEHGQK+ + A+  G
Sbjct: 12  FYITTAIAYPNGAPHIGHAYEFISADVLARFKALDGFDVRFQSGTDEHGQKMQQTAEKEG 71

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+T      NS  F  +   L      FIRTT+  HH     +WK++   GDIY   Y+G
Sbjct: 72  VSTAELAKTNSDRFEALHMALGTDLSRFIRTTDTDHHRASEEIWKRMEAAGDIYLDSYAG 131

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WY +RDEA++ +DE    ADG+    ++  V  W EE+ YFFRLS YQD+LL+ Y+ HPE
Sbjct: 132 WYDVRDEAFFTEDETTVDADGRRVATENGHVLTWTEEQTYFFRLSNYQDRLLALYDEHPE 191

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV SFV  GL DLS+SR TFDWG+K+P  P ++MYVW+DALTNYLT  G+ 
Sbjct: 192 FIGPDVRRNEVRSFVAGGLNDLSISRTTFDWGVKVPGAPDHVMYVWVDALTNYLTGVGFP 251

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D+ + + +++WPADLH+IGKDI+RFH +YWPAFL+SA L +P++VF+HGF+ ++GEK+SK
Sbjct: 252 DD-EQTLSRYWPADLHIIGKDIIRFHCVYWPAFLMSAGLEVPRRVFAHGFLFNRGEKMSK 310

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP E++E+ G+DA+RYF +RE++ G+DG Y  D +  R NADLAN  GNL  R+
Sbjct: 311 SIGNVVDPHELVEQFGLDAVRYFFLREVSYGQDGSYSADAIVARNNADLANEYGNLAQRT 370

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SMI K ++  +P PG FT++D ++L     +L ++RE    Q IH  L  V +++++ +
Sbjct: 371 LSMIGKYFESRVPQPGEFTDADRALLDAADALLPKVREQFDKQSIHLGLEAVWTVLADAN 430

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADEN 483
           RY  AQ+PW+L KT+ DR  TVLYV  EV+R + +L+Q  +P+    + D+L V   DEN
Sbjct: 431 RYVSAQEPWKLAKTDLDRTGTVLYVCAEVVRIVTVLVQPVMPQSTATLLDLLAVPSGDEN 490

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R F ++  RL  G  L K   P+FPR
Sbjct: 491 RQFTAVVDRLAVGAELPKP-TPVFPR 515


>gi|296445799|ref|ZP_06887751.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256627|gb|EFH03702.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 516

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 253/509 (49%), Positives = 350/509 (68%), Gaps = 9/509 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ISTAI Y N  PHIGHAYE I  D  ARF RLDG DVLF TG DEHGQK+ + A+  G+T
Sbjct: 2   ISTAIPYANGAPHIGHAYERIATDAFARFKRLDGYDVLFVTGMDEHGQKMQRTAEREGLT 61

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  F+ M + L+   DD +RTT+ RH  T   +W+++   GDIY   Y GWY
Sbjct: 62  PQQLADRTAAQFQTMGETLNALADDVVRTTQPRHAATVLEIWRRMEAAGDIYLAKYCGWY 121

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S+RDEAYY++ E+ +  +G+       PV+W+EEE +FF+LSAY D+LL++YE+HP+FI 
Sbjct: 122 SVRDEAYYDESEISE-VEGKKLAPTGTPVEWVEEESWFFKLSAYADRLLAHYEAHPDFIT 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGY 244
           P + +NE+++FVK GL DLS+SR TFDWGI +P+ P+    ++MYVW+DALTNY+T TG+
Sbjct: 181 PDKYKNEIVAFVKRGLSDLSISRTTFDWGIPVPEKPETNAKHVMYVWVDALTNYITATGF 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L   +G + +FWPA+ HVIGKDI RFHAIYWPAFL+SA  PLPK++  HGF+  +GEK+S
Sbjct: 241 LTG-EGDRTRFWPANAHVIGKDITRFHAIYWPAFLMSAGAPLPKQIVVHGFLFSRGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DPI++    GVD LRYF +REI  G+DG Y  + +  R+NADLAN +GNL  R
Sbjct: 300 KSLGNVVDPIDLATRYGVDQLRYFFLREIPFGQDGNYSHEAIVNRINADLANDLGNLAQR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K+  G +P+PG  TE+D ++L+  +  L++ R  +     H ALA++  +V + 
Sbjct: 360 SLSMIAKNCGGKVPSPGELTEADRALLAEAAAALEKARAAIDAYAPHLALAEIFGVVGDA 419

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  ++PW  KKT+P R  T+LYVT E +R+LAI LQ F+P  A  + ++L VA+  R
Sbjct: 420 NRYFAGEEPWTKKKTDPKRMETILYVTAEALRRLAIPLQPFIPSAAASLLNLLGVAESAR 479

Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRFL 511
            F S  +   L  G  L     P+FPR++
Sbjct: 480 GFASAGETHALVSGAPLPAP-APVFPRYV 507


>gi|295396171|ref|ZP_06806353.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970959|gb|EFG46852.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 527

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/513 (49%), Positives = 349/513 (68%), Gaps = 12/513 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAYPN  PHIGHAYE I +D +ARF RL G DV   TGTDEHG K+ ++AQ AG
Sbjct: 3   FYMTTAIAYPNGAPHIGHAYEYIASDTIARFKRLTGEDVFMLTGTDEHGLKMQQSAQKAG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +   D+N+  FR + D L  SYD FIRTT+  H+   + LWKK+ + GDIY   Y+G
Sbjct: 63  ITPRELADKNAAGFRALHDALGSSYDRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTYAG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--- 182
           WYS+RDEAYY  DE     DG+ Y  A   PV+W EEE YFF+LSAY+++LL + +S   
Sbjct: 123 WYSVRDEAYYAADETEVREDGERYAIATGTPVEWTEEESYFFKLSAYEERLLEWLDSVDD 182

Query: 183 ---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
              HP  + P  RRNEV+SF+K GLKDLS+SR TFDWG+ +P + +++MYVW+DALTNYL
Sbjct: 183 TGRHP--VGPDVRRNEVVSFIKGGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYL 240

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY +       + WP +LHV+GKDILRFHA+YWPAFL+SA L LPK+V +HGF+ +K
Sbjct: 241 TGAGYPNVDSEEFQQRWPCELHVVGKDILRFHAVYWPAFLMSAGLELPKRVHAHGFLFNK 300

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS+GNV+DP ++++  G+D LRYFL+REI+ G+DG Y    +  R NADLAN  G
Sbjct: 301 GEKMSKSVGNVVDPYDLVDAFGLDTLRYFLLREISYGQDGSYSAGAIIGRKNADLANEYG 360

Query: 360 NLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           NLV RS SM+ K+  G++P  +    T+ D ++L     +L+ +   +  Q +HR +  +
Sbjct: 361 NLVQRSTSMVAKNLSGVVPEVSEADLTDDDRALLERTDGLLERVTAFVDVQELHRYVEAL 420

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++ E +RYF AQ+PW+LKKT+PDR   VLYVT+EV+R+++IL Q  +P+   K+   L
Sbjct: 421 WRVLEETNRYFSAQEPWKLKKTDPDRMGVVLYVTLEVLRRVSILAQPVMPESTGKVLTQL 480

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            VA++ R F    Q L  G  L     P+FPR+
Sbjct: 481 GVAEDARTFNDFGQWLPAGTELPAPA-PVFPRY 512


>gi|144899823|emb|CAM76687.1| Methionyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 518

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/510 (49%), Positives = 343/510 (67%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K+A+
Sbjct: 5   KKTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVKFLTGTDEHGQKVEKSAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ +   D NS NFR++A  L+ S DDFIRTTE RH  + + LW K+   GDIY G 
Sbjct: 65  TAGISPQALADMNSANFRELAARLNCSNDDFIRTTEPRHVASVQALWNKLVQSGDIYLGH 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDEA+Y +DE+  G +G        PV+W++E  YFFRLSA+QDKLL +YE +
Sbjct: 125 YEGWYSVRDEAFYGEDELVAGPNGGKLAPTGAPVEWVKEPSYFFRLSAWQDKLLQWYEDN 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+ + P  RRNEV+SFVK GL+DLS+SR +F WGI +P D  ++MYVW+DALTNY+T  G
Sbjct: 185 PDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDADHVMYVWLDALTNYITAVG 244

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +  DG  A++WPADLH++GKDI+RFHA+YWPAFL++A +    +VF+HG+  ++G+KI
Sbjct: 245 YPEQ-DGDYARYWPADLHMVGKDIVRFHAVYWPAFLMAAGIKPATRVFAHGWWTNEGQKI 303

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP+ +IE+ G+D +RYFL+RE+  G DG Y    +  R+N++LAN  GNL  
Sbjct: 304 SKSVGNVIDPLGLIEKYGLDQVRYFLLREVPFGNDGDYSHRAMVMRMNSELANDYGNLAQ 363

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +SM+ K+    +P  G F + D  +L     +L ++R+ M  QL H  L  +  ++  
Sbjct: 364 RVLSMVGKNCGNAVPVHGDFNDDDREMLDAAHGLLHKLRDAMDRQLFHEGLEALWVVIRA 423

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + Y D Q PW LKKT+P R  TVL+V  E IR LA+L QAF+P  + K+ D L +A + 
Sbjct: 424 ANGYVDRQAPWALKKTDPARMGTVLWVLAETIRNLALLTQAFMPDSSAKLLDQLAIAADQ 483

Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPRFL 511
           R          LKPG  L      +FPRF+
Sbjct: 484 RGLAQCGSHHALKPGTPL-PVPQGVFPRFV 512


>gi|119962681|ref|YP_948227.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119949540|gb|ABM08451.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 519

 Score =  528 bits (1360), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/510 (49%), Positives = 344/510 (67%), Gaps = 3/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   YI+TAI+YPN  PHIGHAYE+I  D +ARF RLDG +V F TGTDEHG K+ ++A
Sbjct: 5   EKSPFYITTAISYPNGVPHIGHAYEVIATDAMARFKRLDGHEVFFMTGTDEHGLKMQQSA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T K   D+NS  F+ M+  L IS+D FIRTT++ H+   + +WKK+   GDIY  
Sbjct: 65  EKEGLTAKQLADRNSAAFKQMSQDLGISHDRFIRTTDQDHYAASQAIWKKMEANGDIYLS 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWYS+RDEAYY +D+     DG  Y+ + +  V W  EE YFFRLS YQDKLL+ YE
Sbjct: 125 KYEGWYSVRDEAYYVEDDTVVKDDGLRYSKETDTLVTWTAEESYFFRLSNYQDKLLALYE 184

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             PEF  P  R NEVISFV+ GL+DLS+SR TFDWG+ +P D +++MYVW+DALTNYLT 
Sbjct: 185 EQPEFGAPQSRFNEVISFVRRGLEDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYLTG 244

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D    S  KFWPAD+HVIGKDI RFHAIYWPAFL+SA L LPK+V  HGF+ + G 
Sbjct: 245 VGYPDIESESFKKFWPADVHVIGKDISRFHAIYWPAFLMSAGLELPKRVMIHGFLTNNGV 304

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P + + + G+D  RYF +RE+  G DG Y+ + +  R+N+DLAN  GNL
Sbjct: 305 KMSKSLGNVVAPQDFVAQYGLDQCRYFFLREVPFGADGNYNHEAIVGRMNSDLANNFGNL 364

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ +G +P PG FT  D+++L+    +L   R     Q   RAL  + +++
Sbjct: 365 AQRSLSMVAKNCEGRVPEPGEFTAEDKALLAQAGELLDTARAAFDKQEFSRALEAIWTVL 424

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + + YF  Q PW L+KT+ +R +TVLYVT+EV+R +AIL Q  +P  + K+ ++L   +
Sbjct: 425 GDTNAYFAEQAPWVLRKTDLERMNTVLYVTLEVVRIVAILAQPVMPSSSAKLLEVLGQPE 484

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            E+R F ++   +  G  L     P+FPR+
Sbjct: 485 GESRQFAAVATPIVAGTELPAP-APVFPRY 513


>gi|183984451|ref|YP_001852742.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M]
 gi|183177777|gb|ACC42887.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M]
          Length = 518

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/507 (48%), Positives = 347/507 (68%), Gaps = 5/507 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+AA  A +
Sbjct: 5   YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQAAAAAEI 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ M + L+IS+D FIRTT+  H++  + +W+++   GDIY   YSGW
Sbjct: 65  PTAQLARRNSDVFQRMQEALNISFDRFIRTTDADHYEASQEIWRRMDAAGDIYLDSYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++YE++P+FI
Sbjct: 125 YSVRDERFFVESETQVVDGTRIATETGTPVTWTEEQTYFFRLSAYADKLLAHYEANPDFI 184

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNEV+SFV  GLKDLS+SR +F+WG+ +P  P ++MYVW+DALTNYLT  GY D 
Sbjct: 185 APEVRRNEVVSFVSGGLKDLSVSRTSFNWGVPVPGHPDHVMYVWVDALTNYLTGAGYPDT 244

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ ++GEK+SKSL
Sbjct: 245 GSEAFLRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRVFAHGFLHNRGEKMSKSL 304

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP+ +IE  GVD +RYFL+RE+  G+DG Y ++ +  R+N DLAN +GNL  RS+S
Sbjct: 305 GNTIDPMGLIETYGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQRSLS 364

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           MI K+  G +P PG F+ +D  +L++   +L+ +RE+  NQ +H AL  +  ++   ++Y
Sbjct: 365 MIAKNLGGAVPEPGEFSAADRELLAIADGLLERVREHFDNQSMHLALEAIWLMLGHANKY 424

Query: 428 FDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           F  Q+PW L+K+  +    R  T LY T E +R  A+L+   +P+ A K+ D+L    + 
Sbjct: 425 FSDQQPWVLRKSESEADQARFRTTLYTTCEAVRIAALLVAPVMPESAAKLLDLLGQGPDQ 484

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F ++  RL PG  +      +FPR+
Sbjct: 485 RSFNAIGARLVPGTAMPSPTG-VFPRY 510


>gi|163795498|ref|ZP_02189464.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
 gi|159179097|gb|EDP63630.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
          Length = 515

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/506 (50%), Positives = 346/506 (68%), Gaps = 5/506 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N +PHIGHAY  +  D LARF RLDG DV+F TGTDEHGQK+  AA  AGV
Sbjct: 6   YVTTPIYYVNDKPHIGHAYTTLACDALARFKRLDGYDVMFLTGTDEHGQKVEAAADAAGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F D+ S+NFRD+  V++ S DDFIRTTE RH    + LW+++ +KG IY G Y+GW
Sbjct: 66  DPQSFTDRVSQNFRDLIGVMNCSTDDFIRTTEPRHVTAVQALWRRLKEKGHIYLGSYAGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+RDEA+Y + E+    +G+       PV+W+EE  YFF LS +Q+ LL++YE++P+FI
Sbjct: 126 YSVRDEAFYVETEL-TTVNGEKRAPSGAPVEWVEEPSYFFDLSKWQEPLLAFYEANPDFI 184

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNEV+SFV+ GL+DLS+SR +F WG+ +PDD  +IMYVW+DALTNY+T  GY D 
Sbjct: 185 APESRRNEVLSFVRGGLRDLSVSRTSFKWGVPVPDDDAHIMYVWLDALTNYITAAGYPDT 244

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            DG  +K WPADLH++GKDILRFHA+YWPAFL+ A L +PK+VF+HG+   +G+K+SKSL
Sbjct: 245 -DGQYSKRWPADLHMVGKDILRFHAVYWPAFLMGAGLEVPKRVFAHGWWTVEGQKMSKSL 303

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP  +++  G+D  RYF++RE+  G DG +    +  R+N++LAN +GNL  R +S
Sbjct: 304 GNAIDPAALVDTYGLDQFRYFMLRELPFGNDGDFSHRAMINRMNSELANDLGNLSQRVLS 363

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M+ K+  G +P PGAF  +DE++L     +L+  R     Q  H+AL  +  +V   +RY
Sbjct: 364 MVAKNCAGAVPQPGAFAAADEALLGAADALLESQRAAYDTQAFHKALDAIFDVVGRANRY 423

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            D Q PW L+KT+P R +TVLY  VE IR +AILLQ  VP    ++ D L V  + R F 
Sbjct: 424 VDEQAPWTLRKTDPARMATVLYTLVETIRHVAILLQPIVPGSCERMLDQLAVPADARDFD 483

Query: 488 SL--DQRLKPGFMLHKTFDPIFPRFL 511
            L  D RL PG  L K  + +FPR++
Sbjct: 484 RLTPDYRLVPGTPLPKP-EGVFPRWV 508


>gi|118619731|ref|YP_908063.1| methionyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571841|gb|ABL06592.1| methionyl-tRNA synthetase MetS [Mycobacterium ulcerans Agy99]
          Length = 518

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 247/507 (48%), Positives = 347/507 (68%), Gaps = 5/507 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+AA  A +
Sbjct: 5   YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQAAAAADI 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ M + L+IS+D FIRTT+  H++  + +W+++   GDIY   YSGW
Sbjct: 65  PTAQLARRNSDVFQRMQEALNISFDRFIRTTDSDHYEASQEIWRRMDAAGDIYLDSYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+RDE ++ + E       +      NPV W EE+ YFFRLSAY DKLL++YE++P+FI
Sbjct: 125 YSVRDERFFVESETQVVDGTRIATETGNPVTWTEEQTYFFRLSAYADKLLAHYEANPDFI 184

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNEV+SFV  GLKDLS+SR +F+WG+ +P  P ++MYVW+DALTNYLT  GY D 
Sbjct: 185 APEVRRNEVVSFVSGGLKDLSVSRTSFNWGVPVPGHPDHVMYVWVDALTNYLTGAGYPDT 244

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  ++WPAD H+IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ ++GEK+SKSL
Sbjct: 245 GSEAFLRYWPADQHMIGKDIIRFHAVYWPAFLMSAGIELPRRVFAHGFLHNRGEKMSKSL 304

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP+ +IE  GVD +RYFL+RE+  G+DG Y ++ +  R+N DLAN +GNL  RS+S
Sbjct: 305 GNTIDPMGLIETYGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQRSLS 364

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           MI K+  G +P PG F+ +D  +L++   +L+ +RE+  NQ +H AL  +  ++   ++Y
Sbjct: 365 MIAKNLGGAVPEPGEFSAADRELLAIADGLLERVREHFDNQSMHLALEAIWLMLGHANKY 424

Query: 428 FDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           F  Q+PW L+K    T+  R  T LY T E +R  A+L+   +P+ A K+ D+L    + 
Sbjct: 425 FSDQQPWVLRKSESETDQARFRTTLYTTCEAVRIAALLVAPVMPESAAKLLDLLGQRPDQ 484

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F ++  RL PG  +      +FPR+
Sbjct: 485 RSFNAIGARLVPGTAMPSPTG-VFPRY 510


>gi|83593036|ref|YP_426788.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83575950|gb|ABC22501.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 519

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/508 (49%), Positives = 343/508 (67%), Gaps = 4/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K+A 
Sbjct: 5   KPPFYLTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVQKSAT 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  + F D+ S NFRD+A  ++ S D FIRTTE RH + C+ LW  + ++G+IY   
Sbjct: 65  AAGIDPQTFTDRVSANFRDLAAAMNFSNDAFIRTTEPRHKEACKALWTLLVERGEIYLDA 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY++RDEA+Y +DE+   ADG        PV+W+EE  YFFRLS +Q  LL  Y + 
Sbjct: 125 YRGWYAVRDEAFYGEDELTTAADGSRLAPTGAPVEWVEEPSYFFRLSKWQQPLLDLYAAR 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEVISFVK GL DLS+SR TF WG+ +P D  ++MYVW+DALTNY+T  G
Sbjct: 185 PDFIAPDSRRNEVISFVKGGLTDLSISRTTFSWGVPVPGDEDHVMYVWLDALTNYITAVG 244

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D   G  A++WPA+LH++GKDILRFH +YWPAFL++A L +P +VF+HG+  ++G+KI
Sbjct: 245 FPDQ-TGDYARYWPANLHMVGKDILRFHTVYWPAFLMAAGLEVPGRVFAHGWWTNEGQKI 303

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP  +IE  G+D +RYFL+RE+  G DG +    +  R+N +LAN +GNL  
Sbjct: 304 SKSVGNVIDPRALIETYGLDPVRYFLLREVPFGNDGDFSHRAMINRMNGELANDLGNLAQ 363

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +SMI K+  G +P PG F+E D+++L+    +L ++R+ M  Q  H AL  +  ++  
Sbjct: 364 RVLSMIAKNCAGAVPEPGPFSEDDDALLAAAVALLDKVRQAMDRQAFHEALEAIWVVIRA 423

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + Y D Q PW L+K +P R +TVLYV  EVIR++A+L+Q FVP  A ++ D L    E 
Sbjct: 424 ANGYVDRQAPWALRKNDPPRMATVLYVLAEVIRRVALLMQPFVPASAARMLDQLGQGPEA 483

Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPR 509
           R   +L  R  L PG +L K  + IFPR
Sbjct: 484 RDTTALGDRPLLAPGTVLPKP-EGIFPR 510


>gi|229587041|ref|YP_002845542.1| methionyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|228022091|gb|ACP53799.1| Methionyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 508

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 256/509 (50%), Positives = 352/509 (69%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T + Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPVYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA++++ E+ +  DG        PV+W++E  YFF LS +QDKLL +YE+HP+FI
Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEAHPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GYLD 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  E 
Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507


>gi|157826102|ref|YP_001493822.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|157800060|gb|ABV75314.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 512

 Score =  521 bits (1343), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 255/512 (49%), Positives = 354/512 (69%), Gaps = 19/512 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL GLDV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRGLDVIFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +  V+ IS DDFIRTTE RH +   + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMAVMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA++++ E+   +DG        PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFFDESEL--TSDGLAPTGA--PVEWVKEPSYFFNLSQWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY D 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYPDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              S  KFWPADLHV+GKDILRFH +YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSSYGKFWPADLHVVGKDILRFHTVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I E G+D +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ RS +
Sbjct: 301 GNTIDPIKLINEFGIDQIRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRSTA 360

Query: 368 MILKDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            + K+ +G +P     T+S      +  IL   S+  ++    M    I++ L  +I+L 
Sbjct: 361 FVYKNNEGKVPL---LTQSVIDKIYELPILKTASKFAEQNILLMDKTEINKILDNIINLA 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+LQ F+P  ANK+ + L ++ 
Sbjct: 418 EEANIYIDSEAPWNLKKTDPDKMLEVLYTLLEVLRYIAIMLQPFIPSSANKMLNQLGISK 477

Query: 482 ENRCFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
           E R F+ L  D  L+ G  +L  T   IFPRF
Sbjct: 478 EERLFKHLIRDYALRAGSNILEPTI--IFPRF 507


>gi|67458627|ref|YP_246251.1| methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536907|sp|Q4UMX2|SYM_RICFE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|67004160|gb|AAY61086.1| Methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 512

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 255/514 (49%), Positives = 356/514 (69%), Gaps = 15/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNDVPHIGHAYTSVASDVIARFIRLCGFDVMFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F D  S +FR + +V++IS DDFIRTTE RH +   I W+K+ D G IY+G 
Sbjct: 62  NKNIDPQKFTDHTSESFRHLMNVMNISNDDFIRTTESRHKEAVAIFWQKLLDNGTIYEGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY++RDEA++++ E+   +DG        PV+W++E  YFF LS +QDKLL +YE++
Sbjct: 122 YEGWYAVRDEAFFDESEL--TSDGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL +Y++  G
Sbjct: 178 PDFIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALASYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KI
Sbjct: 238 YPDK-QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLVTRINSELSNKIGNLLQ 356

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           R+ + + K+ DG +P    G   +  E  IL   S+  ++    M+   I++ L  +I+L
Sbjct: 357 RTTAFVYKNNDGKVPLLMQGIIDKIYELPILKTASKFAEQNILLMEKTEINKVLENIINL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             E + Y D++ PW LKKT+P++ S VLY  +EV+R +AI+LQ F+P  ANK+ D L V 
Sbjct: 417 SEEANIYIDSEAPWNLKKTDPEKMSEVLYTLLEVLRYIAIMLQPFIPSSANKMLDQLGVN 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDP--IFPRF 510
            E R F+ L  D  L+ G       +P  IFPRF
Sbjct: 477 KEERLFKHLIRDYALRAG---SSILEPAIIFPRF 507


>gi|238651000|ref|YP_002916856.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238625098|gb|ACR47804.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 508

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/509 (50%), Positives = 352/509 (69%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA++++ E+ +  DG        PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GYLD 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  E 
Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507


>gi|325963761|ref|YP_004241667.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469848|gb|ADX73533.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 520

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/510 (49%), Positives = 339/510 (66%), Gaps = 3/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   YI+TAI YPN  PHIGHAYE I  D +ARF RLDG DV+F TGTDEHG KIA+ A
Sbjct: 5   EKTPFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQTA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T K  VD+N+  ++     L I+YD FIRTT+  H+   + +WKK+   GDIY  
Sbjct: 65  EKEGITPKELVDRNAEVYKAAHAALGITYDRFIRTTDADHYAASQAIWKKMEANGDIYLS 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWYS+RDEA+Y +D+     DG  Y+ + +  V W  EE YFFRLSAYQ+KLL+ YE
Sbjct: 125 KYEGWYSVRDEAFYGEDDTVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQEKLLALYE 184

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           + PEF  P  R NEVISFVK GL+DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT 
Sbjct: 185 AQPEFGAPQYRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTG 244

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D       K+WPAD+H+IGKDI RFHAIYWPAFL+SA L LPK+V  HGF+ + G 
Sbjct: 245 VGYPDVDSEKFRKYWPADVHIIGKDISRFHAIYWPAFLMSAGLELPKRVMIHGFLHNNGV 304

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P + + + G+D +RYF +RE+  G DG Y+ D +  R+NADLAN  GNL
Sbjct: 305 KMSKSLGNVVAPADFVAQYGLDQVRYFFLREVPFGADGSYNHDAIVGRMNADLANNFGNL 364

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ +G +P PG FT +D +IL+  + +LQ +R     Q   RAL  V  ++
Sbjct: 365 AQRSLSMVAKNCEGRVPVPGEFTAADNAILAQANGLLQTVRAVFDKQEFSRALEAVWGVL 424

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + + YF  Q PW L+KT+  R +TVLYVT+EV+R +AIL Q  +P     +   L   +
Sbjct: 425 GDTNAYFAEQAPWVLRKTDVGRMNTVLYVTLEVLRIVAILAQPVMPAATASLLAALGQPE 484

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            E R F ++   +  G  L     P+FP++
Sbjct: 485 GEARQFAAIATPIAAGTGLPAP-SPVFPKY 513


>gi|157828900|ref|YP_001495142.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933624|ref|YP_001650413.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|157801381|gb|ABV76634.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908711|gb|ABY73007.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 508

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/509 (50%), Positives = 351/509 (68%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA++++ E+ +  DG        PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GYLD 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  + G+KISKSL
Sbjct: 242 -QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNDGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  E 
Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKCVEQNILLMDKTEINKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507


>gi|15840435|ref|NP_335472.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792198|ref|NP_854691.1| methionyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121636936|ref|YP_977159.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148822217|ref|YP_001286971.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|215402823|ref|ZP_03415004.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215410610|ref|ZP_03419418.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215426286|ref|ZP_03424205.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215429868|ref|ZP_03427787.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445157|ref|ZP_03431909.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218752679|ref|ZP_03531475.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219556874|ref|ZP_03535950.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224989408|ref|YP_002644095.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799963|ref|YP_003032964.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           1435]
 gi|254231302|ref|ZP_04924629.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C]
 gi|254363923|ref|ZP_04979969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549993|ref|ZP_05140440.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185918|ref|ZP_05763392.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200036|ref|ZP_05767527.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204225|ref|ZP_05771716.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289442428|ref|ZP_06432172.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289446589|ref|ZP_06436333.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A]
 gi|289555210|ref|ZP_06444420.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605]
 gi|289568984|ref|ZP_06449211.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17]
 gi|289573647|ref|ZP_06453874.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85]
 gi|289744743|ref|ZP_06504121.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987]
 gi|289749536|ref|ZP_06508914.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92]
 gi|289753068|ref|ZP_06512446.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054]
 gi|289757090|ref|ZP_06516468.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85]
 gi|289761143|ref|ZP_06520521.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503]
 gi|294995197|ref|ZP_06800888.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297633534|ref|ZP_06951314.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297730519|ref|ZP_06959637.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298524503|ref|ZP_07011912.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306781942|ref|ZP_07420279.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002]
 gi|306783703|ref|ZP_07422025.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003]
 gi|306788058|ref|ZP_07426380.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004]
 gi|306792391|ref|ZP_07430693.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005]
 gi|306796794|ref|ZP_07435096.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006]
 gi|306802680|ref|ZP_07439348.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008]
 gi|306806859|ref|ZP_07443527.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007]
 gi|306967060|ref|ZP_07479721.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009]
 gi|313657848|ref|ZP_07814728.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|38258294|sp|P59952|SYM_MYCBO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13880605|gb|AAK45286.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31617786|emb|CAD93895.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA
           ligase) [Mycobacterium bovis AF2122/97]
 gi|121492583|emb|CAL71051.1| Probable methionyl-trna synthetase metS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600361|gb|EAY59371.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C]
 gi|134149437|gb|EBA41482.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148720744|gb|ABR05369.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis F11]
 gi|224772521|dbj|BAH25327.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321466|gb|ACT26069.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           1435]
 gi|289415347|gb|EFD12587.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289419547|gb|EFD16748.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A]
 gi|289439842|gb|EFD22335.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605]
 gi|289538078|gb|EFD42656.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85]
 gi|289542738|gb|EFD46386.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17]
 gi|289685271|gb|EFD52759.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987]
 gi|289690123|gb|EFD57552.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92]
 gi|289693655|gb|EFD61084.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054]
 gi|289708649|gb|EFD72665.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503]
 gi|289712654|gb|EFD76666.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85]
 gi|298494297|gb|EFI29591.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308325333|gb|EFP14184.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002]
 gi|308331486|gb|EFP20337.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003]
 gi|308335292|gb|EFP24143.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004]
 gi|308339100|gb|EFP27951.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005]
 gi|308342772|gb|EFP31623.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006]
 gi|308346681|gb|EFP35532.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007]
 gi|308350596|gb|EFP39447.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008]
 gi|308355229|gb|EFP44080.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009]
 gi|323720508|gb|EGB29590.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904766|gb|EGE51699.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis W-148]
 gi|328459706|gb|AEB05129.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           4207]
          Length = 519

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/508 (49%), Positives = 354/508 (69%), Gaps = 7/508 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+AA  AGV
Sbjct: 5   YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGYDVRFLTGTDEHGLKVAQAAAAAGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ M + L+IS+D FIRTT+  HH+  + LW+++S  GDIY   YSGW
Sbjct: 65  PTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+RDE ++ + E  +  DG     +   PV W EE+ YFFRLSAY DKLL++Y ++P+F
Sbjct: 125 YSVRDERFFVESET-QLVDGTRLTVETGTPVTWTEEQTYFFRLSAYTDKLLAHYHANPDF 183

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEVISFV  GL DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT  G+ D
Sbjct: 184 IAPETRRNEVISFVSGGLDDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGAGFPD 243

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ ++GEK+SKS
Sbjct: 244 TDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNRGEKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GN++DP+ + E +GVD +RYFL+RE+  G+DG Y  + +  R+N DLAN +GNL  RS+
Sbjct: 304 VGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLAQRSL 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM+ K+ DG +P PG F ++D ++L+    +L+ +R +   Q +H AL  +  ++ + ++
Sbjct: 364 SMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLGDANK 423

Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YF  Q+PW L+K+  +    R  T LYVT EV+R  A+L+Q  +P+ A KI D+L  A  
Sbjct: 424 YFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLGQAPN 483

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F ++  RL PG  L      +FPR+
Sbjct: 484 QRSFAAVGVRLTPGTALPPPTG-VFPRY 510


>gi|108801230|ref|YP_641427.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870381|ref|YP_940333.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126437210|ref|YP_001072901.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|108771649|gb|ABG10371.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696470|gb|ABL93543.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126237010|gb|ABO00411.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 515

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/511 (47%), Positives = 343/511 (67%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV + TGTD HGQK+A+ A  
Sbjct: 3   QPFYITTAIAYPNGDPHVGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETATA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV       +NS  F+ + + L+IS+D FIRT++  H+     +W++++  GDIY   Y
Sbjct: 63  LGVPVADLARRNSDVFQRLQEKLNISFDRFIRTSDTDHYRASEDIWQRMNAAGDIYLDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E     DG     +   P+ W EE+ YFF+LSAY D+LL++YE+H
Sbjct: 123 SGWYSVRDERFFTEGETTLREDGVRIATETGAPLTWTEEQTYFFKLSAYTDRLLAHYEAH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++SFV  GL+DLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 183 PEFIQPDARRNEIVSFVSGGLRDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPADLH+IGKDI+RFH +YWPAFL+SA L LP+KVF+HG++L++GEK+
Sbjct: 243 YPDTSSEEFQRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLELPRKVFAHGWLLNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYF +RE+  G+DG Y +D +  R+NADLAN +GNL  
Sbjct: 303 SKSIGNVVDPVNLVDTFGLDQVRYFFLREVPFGQDGSYSEDAIIGRINADLANELGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+    +P PG FT  D ++L     ++  +R +   Q +H AL  + S++  
Sbjct: 363 RSLSMVAKNLGSAVPEPGEFTAEDLALLDAADALMDRVRRHFDEQAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K+    +  R  TVLY T+E +R  A+L Q  +P     + D++  
Sbjct: 423 ANRYFSAQEPWVLRKSEAVHDQVRFRTVLYTTLETVRIAALLSQPVMPDSTATLLDLVGQ 482

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F ++  RL PG  L K    +FPR+
Sbjct: 483 PADQRTFAAVSTRLTPGTALPKPVG-VFPRY 512


>gi|15892969|ref|NP_360683.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|25009381|sp|Q92GS6|SYM_RICCN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15620165|gb|AAL03584.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 508

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/509 (50%), Positives = 351/509 (68%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +   + IS DDFIRTTE RH     + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKKAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA++++ E+ +  DG        PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GYLD 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  E 
Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKTDPDKMLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507


>gi|34581336|ref|ZP_00142816.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262721|gb|EAA26225.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 508

 Score =  518 bits (1334), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 255/509 (50%), Positives = 352/509 (69%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y+++DEA++++ E+ +  DG        PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVQDEAFFDESELTR--DGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GYLD 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYLDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ D  +P  T G   +  E  IL   S+V+++    M    I++ L  +I+L  E 
Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKVVEQNILLMDKTEINKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKK +PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKIDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507


>gi|332185017|ref|ZP_08386766.1| methionyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014741|gb|EGI56797.1| methionyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 518

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/512 (48%), Positives = 335/512 (65%), Gaps = 10/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN +PHIGHAYEM+ ADV+ARF R  G DVLF TGTDEHG K+A+AA+ 
Sbjct: 3   DPFYITTAIHYPNGRPHIGHAYEMVAADVIARFQRQAGRDVLFQTGTDEHGLKMAQAARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++T+ F D+ S  F  MAD LDISYD FIRT +  H+   + +WK +  KGD+Y   Y
Sbjct: 63  RGISTREFADEMSSYFHVMADRLDISYDRFIRTVDADHYAASQAIWKAMQAKGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+  G DG   + Q  PV+W  EE +FFRLS YQ  LL  Y  +P
Sbjct: 123 EGWYSVRDEAFYDEAELTLGEDGTKLSPQGTPVEWTAEETWFFRLSKYQQPLLDLYRDNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+ FV+ GL DLS+SR +FDWG+ +PD P ++MYVW+DALTNYLT TGY
Sbjct: 183 DFIRPESRRNEVMRFVEGGLSDLSVSRTSFDWGVPVPDSPGHVMYVWVDALTNYLTGTGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N D   A+FWPA+LH+IGKDI+RFH +YWPAFL+SA+LPLP+ VF HGF+LH+GEK+S
Sbjct: 243 -PNKDSELARFWPANLHLIGKDIVRFHTVYWPAFLMSADLPLPQSVFGHGFLLHRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP+ + +  GVDALRYF +RE++ G+DG Y  + +  RVNA+LAN  GNL  R
Sbjct: 302 KSVGNVVDPMGLADAFGVDALRYFFLREVSFGQDGSYSAEAIVTRVNAELANSFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S I K+  G +P  G    +D  ++         ++    + ++ + +   +  V   
Sbjct: 362 TLSFIAKNLGGALPEAGRSDPTDAMLIEEVVVACAGLKTAFDDLMLSQGIEAWMRGVYAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++Y D Q PW L+KT+P+R   VL   V  IR LAI +    P+ A ++ D L    E R
Sbjct: 422 NQYIDVQAPWSLRKTDPERMHAVLGTLVRAIRMLAIAILPVTPRGAGQVLDTL--GAEER 479

Query: 485 CFQSLD------QRLKPGFMLHKTFDPIFPRF 510
              ++D      +R   G  L     P FPR 
Sbjct: 480 DHAAIDDDGWYARRAATGVPLSPP-TPAFPRL 510


>gi|163839798|ref|YP_001624203.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953274|gb|ABY22789.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 529

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/510 (50%), Positives = 355/510 (69%), Gaps = 5/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++TAI YPN  PHIGHAYE + AD LARF RLDG DV + +GTDEHG K+ +AA+
Sbjct: 7   KRPYYLTTAITYPNGVPHIGHAYEYVSADALARFKRLDGFDVFYMSGTDEHGIKVQQAAE 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT    VD+NS   R + D+++ SYD FIRTTE  H+   + LW+++   GDIY   
Sbjct: 67  KEGVTPLELVDRNSAAIRAVHDLVESSYDRFIRTTEPEHYLASQELWRRMEANGDIYLDK 126

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+RDEAYY D++    ADG +Y       V W EEE YFFRLS YQ+KLL+ YE+
Sbjct: 127 YTGWYSVRDEAYYTDEQTELRADGIRYAIETETEVTWTEEESYFFRLSNYQEKLLALYEA 186

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            PEF  P  R NEVISFVKSGL+DLS+SR +F+WG+ +P + +++MYVW+DALTNYLT  
Sbjct: 187 QPEFAAPQYRFNEVISFVKSGLQDLSISRTSFNWGVPVPGNDKHVMYVWVDALTNYLTGA 246

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D    S+ K+WPAD+H+IGKDI RFHAI+WP FL+SA LPLPK+V  HGF+ + G K
Sbjct: 247 GFPDE-SSSQWKYWPADVHIIGKDISRFHAIFWPGFLMSAGLPLPKRVMIHGFLFNNGVK 305

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P + +   GVDA+R+F +RE++ G+DG Y  + +  R N+DLAN +GNL 
Sbjct: 306 MSKSFGNVVAPADWVAAYGVDAVRFFFLREVSYGQDGNYSHEAIISRKNSDLANNLGNLA 365

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ DG++PTPG F+ +D++IL+    +L   R + + Q  HRAL  + +++ 
Sbjct: 366 QRSLSMVAKNCDGVVPTPGEFSSADQAILAKAQALLAANRASYEVQEFHRALEAIWAVLG 425

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--A 480
           + + YF  Q PW L+KT+P+R +TVLYVT+EV+R +A+L+Q  +P  A K+ D+L V  A
Sbjct: 426 DTNAYFADQAPWVLRKTDPERMATVLYVTLEVLRIVALLIQPVMPGSAAKLLDVLGVSAA 485

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  R F +++  L  G  L     PIFPR+
Sbjct: 486 EGARDFTAVETPLVAGTALPAP-SPIFPRY 514


>gi|15608147|ref|NP_215523.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148660789|ref|YP_001282312.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|167968135|ref|ZP_02550412.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|306775143|ref|ZP_07413480.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001]
 gi|306971250|ref|ZP_07483911.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010]
 gi|307078978|ref|ZP_07488148.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011]
 gi|307083539|ref|ZP_07492652.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012]
 gi|3122902|sp|O05593|SYM_MYCTU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2052144|emb|CAB08142.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA
           ligase) [Mycobacterium tuberculosis H37Rv]
 gi|148504941|gb|ABQ72750.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|308216293|gb|EFO75692.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001]
 gi|308359184|gb|EFP48035.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010]
 gi|308363118|gb|EFP51969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011]
 gi|308366750|gb|EFP55601.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012]
          Length = 519

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 251/508 (49%), Positives = 353/508 (69%), Gaps = 7/508 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAYPNA PH+GHAYE I  D +ARF RLD  DV F TGTDEHG K+A+AA  AGV
Sbjct: 5   YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDRYDVRFLTGTDEHGLKVAQAAAAAGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T     +NS  F+ M + L+IS+D FIRTT+  HH+  + LW+++S  GDIY   YSGW
Sbjct: 65  PTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYSGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           YS+RDE ++ + E  +  DG     +   PV W EE+ YFFRLSAY DKLL++Y ++P+F
Sbjct: 125 YSVRDERFFVESET-QLVDGTRLTVETGTPVTWTEEQTYFFRLSAYTDKLLAHYHANPDF 183

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEVISFV  GL DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT  G+ D
Sbjct: 184 IAPETRRNEVISFVSGGLDDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGAGFPD 243

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ ++GEK+SKS
Sbjct: 244 TDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNRGEKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GN++DP+ + E +GVD +RYFL+RE+  G+DG Y  + +  R+N DLAN +GNL  RS+
Sbjct: 304 VGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLAQRSL 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM+ K+ DG +P PG F ++D ++L+    +L+ +R +   Q +H AL  +  ++ + ++
Sbjct: 364 SMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLGDANK 423

Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YF  Q+PW L+K+  +    R  T LYVT EV+R  A+L+Q  +P+ A KI D+L  A  
Sbjct: 424 YFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLGQAPN 483

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F ++  RL PG  L      +FPR+
Sbjct: 484 QRSFAAVGVRLTPGTALPPPTG-VFPRY 510


>gi|157964833|ref|YP_001499657.1| methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844609|gb|ABV85110.1| Methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 508

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/509 (49%), Positives = 348/509 (68%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S  FR +   + IS DDFIRTTE RH +   + W+K+ + G IY+G Y GW
Sbjct: 66  DPQQFTDQTSEIFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLENGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA++++ E+   +DG        PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFFDESEL--TSDGLAPTGA--PVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+ ++ ++++YVW+DAL NY++  GY D 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVSNNEKHVIYVWLDALANYISALGYPDK 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK +  HG+  ++G+KISKSL
Sbjct: 242 -QSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMVHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  E 
Sbjct: 361 FVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLIRDYTLTAGSNILEPTI--IFPKF 507


>gi|329113410|ref|ZP_08242191.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697235|gb|EGE48895.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 512

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/506 (47%), Positives = 340/506 (67%), Gaps = 2/506 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  I ADV+ARFHRL G +V F TGTDEHGQK+ +AAQ  
Sbjct: 4   RFYVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQAN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K F D+ S +FR+MAD ++ISYDDFIRTTE RH  + + LWKK++D G IY G Y 
Sbjct: 64  GIDAKSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY+LRDE +Y +DE+  G DG+       PV+W++E  YFF+LS YQD+LL  YE++P+
Sbjct: 124 GWYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P   RNE++SFVK GL+DLS+SR +F WGI +P D +++MYVW DAL NYL+  GY 
Sbjct: 184 FLGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSALGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D     +  FWPA+LH++GKDI RFHA+YWPAFL++A + LP+KVF++G+   +G+K+SK
Sbjct: 244 DT-SAPRMAFWPANLHLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWWTIEGQKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP ++++E G+DA+R+FL+RE+  G D    +  L  R N +LAN +GNL  R+
Sbjct: 303 SLGNVVDPRDLVKEFGLDAVRFFLLREVPFGGDSDLSRKALIMRNNVELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S++ ++  G++P     TE D  +L     +   ++  ++   +  AL  V  ++   +
Sbjct: 363 LSLVARNCGGVLPERRTLTEEDTHLLGQVMVLPDLLKSQIERCALTDALEDVWKVIRACN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y D Q PW L+KT+P+R   VL V V+ +R +A +LQ F+P+   ++ D L V  E R 
Sbjct: 423 AYIDHQAPWALRKTDPERMKDVLRVLVDALRGIATMLQPFMPQSMERMLDQLSVTAEERS 482

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511
           F +L+  L  G  L      IFPR++
Sbjct: 483 FAALETPLPGGRQLPAP-QGIFPRYV 507


>gi|296284128|ref|ZP_06862126.1| methionyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 520

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/517 (48%), Positives = 345/517 (66%), Gaps = 19/517 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI YPN +PHIGHAYE + ADV+ARF RL G DV F TGTDEHG K+A+ A+ 
Sbjct: 3   EPYYITTAIHYPNGKPHIGHAYETVAADVIARFQRLKGRDVRFQTGTDEHGLKMARKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D+ S  FRD+ D L+ISYD FIRTTE  HH   + LW+++   GD+Y   Y
Sbjct: 63  QGKTPRELADEMSGYFRDLFDRLNISYDRFIRTTEAGHHTASQALWRRMEANGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+ +G  G+  + Q  PV+W  EE +FFRLS YQDKLL  Y S P
Sbjct: 123 EGWYSVRDEAFYDEKELVEGEGGEKLSPQGTPVEWTVEESWFFRLSKYQDKLLDLYASQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+ FV+ GL+DLS+SR +FDWG+++P    ++MYVW+DALTNY++  GY
Sbjct: 183 DFIQPDSRRNEVMRFVEGGLRDLSISRTSFDWGVQVPGAEDHVMYVWVDALTNYISGLGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +  +G+  K+WPADLH+IGKDI+RFH +YWPAFL+SA + LP++V+ HGF+L++G+K S
Sbjct: 243 PE--EGADWKYWPADLHLIGKDIIRFHTVYWPAFLMSAGVDLPRQVYGHGFLLNRGQKES 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP  + E+ GVDALRYFL+REIA G+DG Y  + +  R NA+LAN  GNL  R
Sbjct: 301 KSLGNVTDPNVLAEQFGVDALRYFLMREIAFGQDGSYSPEAIVTRANAELANSFGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVIS--- 419
           ++SMI K+ DG +   GA++ +  D+++L+    V    RE +  Q    A +  I    
Sbjct: 361 TLSMIAKNLDGEL---GAYSPAGDDKALLTT---VQDACREGLPKQFEKLAFSTGIEAWM 414

Query: 420 -LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V   ++Y D Q PW LKKT+P+R  TVL      +R LAI +Q  +P+ A+ +  +L 
Sbjct: 415 KAVYACNQYVDEQAPWALKKTDPERMRTVLQTLFIALRDLAIAIQPVIPEKADHLLTMLG 474

Query: 479 VADENRCFQSLDQRLKPGFMLHKTF-----DPIFPRF 510
           +A++ R F+ L      G ++   +      P+FPR 
Sbjct: 475 IAEDARTFEDLADEGWYGALVRTGYRVAPPSPLFPRL 511


>gi|258542241|ref|YP_003187674.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633319|dbj|BAH99294.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636378|dbj|BAI02347.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639431|dbj|BAI05393.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642487|dbj|BAI08442.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645542|dbj|BAI11490.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648595|dbj|BAI14536.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651648|dbj|BAI17582.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654639|dbj|BAI20566.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 512

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/506 (47%), Positives = 340/506 (67%), Gaps = 2/506 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  I ADV+ARFHRL G +V F TGTDEHGQK+ +AAQ  
Sbjct: 4   RFYVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQAN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K F D+ S +FR+MAD ++ISYDDFIRTTE RH  + + LWKK++D G IY G Y 
Sbjct: 64  GTDAKSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY+LRDE +Y +DE+  G DG+       PV+W++E  YFF+LS YQD+LL  YE++P+
Sbjct: 124 GWYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P   RNE++SFVK GL+DLS+SR +F WGI +P D +++MYVW DAL NYL+  GY 
Sbjct: 184 FLGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSALGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  +  +  FWPA+LH++GKDI RFHA+YWPAFL++A + LP+KVF++G+   +G+K+SK
Sbjct: 244 DT-NAPRMAFWPANLHLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWWTIEGQKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP ++++E G+DA+R+FL+RE+  G D    +  L  R N +LAN +GNL  R+
Sbjct: 303 SLGNVVDPRDLVKEFGLDAVRFFLLREVPFGGDSDLSRKALIMRNNVELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S++ ++  G++P     TE D  +L     +   ++  ++   +  AL  V  ++   +
Sbjct: 363 LSLVARNCGGILPERRELTEEDTHLLGQVMVLPDLLKSQIERCALTDALEDVWKVIRACN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y D Q PW L+KT+P+R   VL V V+ +R +A +LQ F+P+   ++ D L V  E R 
Sbjct: 423 AYIDHQAPWALRKTDPERMKDVLRVLVDALRGIATMLQPFMPQSMERMLDQLAVTAEERS 482

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511
           F +L+  L  G  L      IFPR++
Sbjct: 483 FAALEMPLPGGRQLPAP-QGIFPRYV 507


>gi|157827625|ref|YP_001496689.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|157802929|gb|ABV79652.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 509

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/513 (48%), Positives = 347/513 (67%), Gaps = 21/513 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G +V+F TGTDEHGQK+ KAA +  +
Sbjct: 6   YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEVMFLTGTDEHGQKVEKAAIDKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S++FR +   + IS DDFIRTTE+RH     I W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA+Y++ E+          A    V+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFYDESELTADKLAPTGAA----VEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P+D ++++YVW+DAL NY++  GY D 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNDNKHVIYVWLDALANYISALGYPDQ 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            + +  KFWPA+L V+GKDILRFHAIYWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -NSNYGKFWPANLQVVGKDILRFHAIYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++IEE GVD +RYFL+REI  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVS 422
            + K+ DG +P  T  A  +  E  L +    +   ++N   M+   I++ L  +I+L  
Sbjct: 361 FVYKNNDGKVPAITQDAINKIYE--LPLLKTAINSAKQNILLMEKTEINKILDNIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+P++   VLY  +E +R +A++LQAF+P  A K+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQLGVNTE 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFD-----PIFPRF 510
            R F+ L       F L    D      +FPRF
Sbjct: 479 ERLFKHLSLE----FALTSASDILEPVIVFPRF 507


>gi|91205053|ref|YP_537408.1| methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123388147|sp|Q1RJZ5|SYM_RICBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91068597|gb|ABE04319.1| Methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 509

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/513 (48%), Positives = 347/513 (67%), Gaps = 21/513 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL G +V+F TGTDEHGQK+ KAA +  +
Sbjct: 6   YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEVMFLTGTDEHGQKVEKAAIDKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S++FR +   + IS DDFIRTTE+RH     I W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA+Y++ E+          A    V+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFYDESELTADKLAPTGAA----VEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P+D ++++YVW+DAL NY++  GY D 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNDNKHVIYVWLDALANYISALGYPDQ 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            + +  KFWPA+L V+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -NSNYGKFWPANLQVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++IEE GVD +RYFL+REI  G DG + +  L  R+N++L+N IGNL+ R+ S
Sbjct: 301 GNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLLQRTTS 360

Query: 368 MILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVS 422
            + K+ DG +P  T  A  +  E  L +    +   ++N   M+   I++ L  +I+L  
Sbjct: 361 FVYKNNDGKVPAITQDAINKIYE--LPLLKTAINSAKQNILLMEKTEINKILDNIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+P++   VLY  +E +R +A++LQAF+P  A K+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQLGVNTE 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFD-----PIFPRF 510
            R F+ L       F L    D      +FPRF
Sbjct: 479 ERLFKHLSLE----FALTSASDILEPVIVFPRF 507


>gi|239948424|ref|ZP_04700177.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241563440|ref|XP_002401705.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501897|gb|EEC11391.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|239922700|gb|EER22724.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 508

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/509 (49%), Positives = 347/509 (68%), Gaps = 13/509 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  + +DV+ARF RL   DV+F TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRSFDVMFLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y GW
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA+Y++ E+ +G           PV+W++E  YFF LS +QDKLL +YE++P+FI
Sbjct: 126 YAVRDEAFYDESELTEGKLA----PMGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++   Y D 
Sbjct: 182 RPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISVLDYPDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPA+LHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSNYGKFWPANLHVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ +
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTA 360

Query: 368 MILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + K+ DG +P  T     +  E  IL   S+  ++    M    I++ L ++I+L  E 
Sbjct: 361 FVYKNNDGKVPLLTQDVIDKIYELPILKNASKFAEQNILLMDKTEINKILEKIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D++ PW LKK +PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E R
Sbjct: 421 NIYIDSEAPWNLKKIDPDKMLEVLYTLLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEER 480

Query: 485 CFQSL--DQRLKPGF-MLHKTFDPIFPRF 510
            F+ L  D  L  G  +L  T   IFP+F
Sbjct: 481 LFKHLVRDYALTAGSNILEPTI--IFPKF 507


>gi|330994631|ref|ZP_08318554.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758272|gb|EGG74793.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 512

 Score =  508 bits (1308), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 244/508 (48%), Positives = 335/508 (65%), Gaps = 6/508 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  + ADV+ARF RL G DV F TGTDEHGQK+ +AAQ A
Sbjct: 4   RYYVTTPIYYVNGAPHIGHAYTSVAADVIARFKRLAGFDVFFLTGTDEHGQKVEQAAQAA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T   F D+ + +FRDM D + ISYDDFIRTTE RH    + LWKK+ + G IY   Y 
Sbjct: 64  GMTPIAFADRVAADFRDMYDTMAISYDDFIRTTEPRHVQGAQALWKKLEENGHIYLDAYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY+ RDE +Y ++E+  G DG+        V+W++E  YFF LS + D+LL  YE+ P 
Sbjct: 124 GWYATRDECFYGEEELIDGPDGKKVAPTGAAVEWVKEPSYFFDLSRFGDRLLELYETRPG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFVK GL++LS+SR +F WGI +P DP+++MYVW+DAL NYL+  GY 
Sbjct: 184 FIEPASRRNEVISFVKQGLRNLSVSRTSFSWGIPVPGDPKHVMYVWVDALANYLSAVGY- 242

Query: 246 DNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             PD   A+  FWPA+LH++GKDILRFHAIYWPA L++A LPLP +VFSHG+   +G+K+
Sbjct: 243 --PDAGAARWGFWPANLHLVGKDILRFHAIYWPALLMAAGLPLPDRVFSHGWWTIEGQKM 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP +++ E G+D +R+FL+RE+  G D    +  +  R+N +LAN +GNL  
Sbjct: 301 SKSLGNVVDPRDLVTEFGLDPIRFFLMREMPFGGDSDLSRRAIISRMNVELANDLGNLAQ 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++S I ++ DG +P  G  T  D  +L+  S ++Q + E +  Q +  AL +V  L+  
Sbjct: 361 RTLSQIARNCDGKLPPQGTHTPEDTKLLAPASLLVQIMHEQIDRQALTDALEEVWKLIRA 420

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + Y D Q PW+LKKT+  R   VL V  + +R +A +LQ ++P   +++   L VA+  
Sbjct: 421 CNAYIDHQAPWKLKKTDAARMGDVLRVLADALRIIATVLQPYMPGSMDRMLTQLGVAEGE 480

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F SLD  L  G  L      IFPR++
Sbjct: 481 RTFASLDVPLPAGRALPAP-QGIFPRYV 507


>gi|148553410|ref|YP_001260992.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498600|gb|ABQ66854.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 523

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/513 (47%), Positives = 338/513 (65%), Gaps = 10/513 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I AD +ARF R  G DV F TGTDEHG K+A+AA+ 
Sbjct: 7   EPYYITTAISYPNGRPHIGHAYEAIAADAIARFQRSMGRDVRFQTGTDEHGLKMAQAARA 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +T +   D+ S  F++M + L+IS D FIRT++  H+   + +W+ +   GD+Y   Y
Sbjct: 67  RDITPRALADEMSSYFKEMCETLNISCDRFIRTSDADHYAASQAIWQAMEANGDLYLDRY 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+  G  GQ  + Q  PV+W +EE +FFRLS YQ+ LL  Y   P
Sbjct: 127 EGWYSVRDEAFYDEKELTDGEGGQKLSPQGTPVEWTKEESWFFRLSRYQEPLLQLYRDQP 186

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE++SFV  GL DLS+SR +FDWG+ +P  P ++MYVW+DALTNYLT  GY
Sbjct: 187 DFIRPETRRNEIVSFVSGGLSDLSVSRTSFDWGVPVPGSPGHVMYVWVDALTNYLTGIGY 246

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D +  ++WPA+LH+IGKDI+RFH +YWPAFL+SA +PLPK+VF HGF+L+KGEK+S
Sbjct: 247 PDR-DAALGRYWPANLHLIGKDIVRFHTVYWPAFLMSAKIPLPKQVFGHGFLLNKGEKMS 305

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP+ + E  GVD LRYFL+RE++ G+DG Y  + +  R NA+LAN  GNL  R
Sbjct: 306 KSVGNVVDPMTMAERYGVDQLRYFLLREVSFGQDGSYGHEAIVNRANAELANSFGNLAQR 365

Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           ++SMI K+ DG +P     TE D +++ +V +  L E     +       +   +  V  
Sbjct: 366 TLSMIFKNLDGELPALDR-TEDDAALVRAVATACLDETPRAFEQLAFSIGIEAWMKAVFA 424

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            ++Y DAQ PW L+KT+P+R  TVL     VIR LAI +   +P  A K+ D + VA + 
Sbjct: 425 CNQYVDAQAPWTLRKTDPERMKTVLGTLFAVIRDLAITILPIIPDSAGKLLDQMGVAADA 484

Query: 484 RCFQSL------DQRLKPGFMLHKTFDPIFPRF 510
           R F ++      D+    G+ + +   P+FPR 
Sbjct: 485 RDFAAIESQAWYDELRASGYRVAQPV-PLFPRL 516


>gi|58038507|ref|YP_190471.1| methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58000921|gb|AAW59815.1| Methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 516

 Score =  505 bits (1300), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 235/506 (46%), Positives = 341/506 (67%), Gaps = 2/506 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  I+T I Y N  PHIGHAY  I ADVLARFHRL+G +VLF +GTDEHGQK+ + A   
Sbjct: 9   RFIITTPIFYVNGAPHIGHAYTSIAADVLARFHRLNGEEVLFVSGTDEHGQKVEQTAVAK 68

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  + + D+ S +FR M   + IS D+FIRTTE+RH    + LW+K++  G IY G Y 
Sbjct: 69  GMDPQAYADEVSASFRQMQKDMAISTDEFIRTTEERHKGAAKALWEKVAANGHIYLGAYE 128

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS RDEA+  +DE+ K  DG +      PV+ ++E  YFFRLS +QD+LL  YE +P+
Sbjct: 129 GWYSTRDEAFIGEDELVKKPDGTFVAPSGAPVERVKEPSYFFRLSDFQDRLLKLYEDNPD 188

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P+  R E+ SFV+ GL+DLS+SR +F WG+ +P+DP ++MYVW DAL NYLT  GY 
Sbjct: 189 FIGPVGPRREIESFVRQGLRDLSVSRTSFKWGVPVPNDPDHVMYVWFDALANYLTAVGYP 248

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  D  +AKFWPAD+H++GK+I RFH +YWPAFL++A + LPK VF+HG+   +GEK+SK
Sbjct: 249 DLND-PRAKFWPADVHIVGKEIARFHCVYWPAFLMAAGIDLPKSVFAHGWWTVEGEKMSK 307

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP  + +E G+DALR+FL+RE+  G D  + +  +  R N +LAN +GNL  R+
Sbjct: 308 SLGNVLDPKALADEFGLDALRFFLMREVPFGGDSNFSRRSMITRTNVELANDLGNLCQRT 367

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S + ++  G++P  G  TE D+++L++ + +   + E ++ + I  AL +V  ++   +
Sbjct: 368 LSQVARNLGGVLPERGTLTEDDQAMLAMVTLLPTIMSEQIERKAITDALEEVWKVIRAAN 427

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y D Q PW LKKT+P+R + VL V V++IR +A +LQ ++P   +++   L V D+ R 
Sbjct: 428 SYIDRQAPWALKKTDPERMADVLRVLVDMIRGIATMLQPYMPNTMDRMLTQLGVQDDERT 487

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511
           F +L+  L  G  L K  + +FPRF+
Sbjct: 488 FAALETPLPAGRTLPKP-EGLFPRFV 512


>gi|224009692|ref|XP_002293804.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220970476|gb|EED88813.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 579

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/507 (48%), Positives = 348/507 (68%), Gaps = 10/507 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y N +PHIGHAY  +  DV+AR+ RL G DV F +GTDEHGQK+   A+NA + 
Sbjct: 66  ITTPIYYVNDKPHIGHAYTSLACDVIARYMRLSGRDVFFLSGTDEHGQKVETTAKNANME 125

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              F D  S +F+++  +L+IS D+FIRTT++ H    + LW  + +KG IY G Y GWY
Sbjct: 126 PLAFCDMVSASFKELLTLLNISNDEFIRTTDEDHKKAVQHLWNVLVEKGAIYLGSYEGWY 185

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFI 187
           S+RDE YYN+ E+    DG+        V+W++ E+ YFF+LS YQD+LL+YYE+HP+FI
Sbjct: 186 SVRDECYYNESEL---VDGKAPTGAE--VEWVKKEDSYFFKLSEYQDELLNYYEAHPDFI 240

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  R+NEV+SFVK GLKDLS+SR TFDWG+ +P D  ++MYVWIDALTNY++  GY + 
Sbjct: 241 APESRKNEVVSFVKGGLKDLSISRTTFDWGVPVPGDDDHVMYVWIDALTNYMSALGYPNT 300

Query: 248 -PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
            P G+  KFWPA LHV+GKDILRFHA+YWPAFLL+A +PLPK++F+HG+    GEKISKS
Sbjct: 301 EPGGNFDKFWPASLHVVGKDILRFHAVYWPAFLLAAGIPLPKRIFAHGWWTKDGEKISKS 360

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGNVIDP+E+I+  GVD  R+FL+ E+  G DG +  + +  +VNA+L+N +GNL  R +
Sbjct: 361 LGNVIDPVELIDTYGVDPTRFFLMSEVVFGNDGDFSDEKMIYKVNANLSNELGNLNQRIM 420

Query: 367 SMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +++ K+ +  +P   G  TE+D+ +L+  + +     E + +Q IH+ +  +IS+V + +
Sbjct: 421 TLVFKNCNKAVPAEIGPLTEADKQLLAKAASLRGITSEAIASQSIHKYVEHMISMVWDAN 480

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +Y D Q PW LKKT+ +R +TVLYV +EV+R +AIL Q  +P  +N I D L V ++ R 
Sbjct: 481 KYIDVQAPWVLKKTDTERMNTVLYVLMEVMRHVAILYQPLMPTSSNVILDQLGVPEDERE 540

Query: 486 FQSLDQRLKPGFMLHKTFDP--IFPRF 510
           F+ LD+      +  +   P  +FPRF
Sbjct: 541 FEHLDKEECKIMLGREVGKPHAVFPRF 567


>gi|15604526|ref|NP_221044.1| methionyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226189|sp|Q9ZCP0|SYM_RICPR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3861220|emb|CAA15120.1| METHIONYL-TRNA SYNTHETASE (metS) [Rickettsia prowazekii]
 gi|292572314|gb|ADE30229.1| Methionyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 508

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/514 (48%), Positives = 342/514 (66%), Gaps = 15/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N   HIGHAY  + +DV+ARF R  G DV+F TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNDVAHIGHAYTSVASDVIARFMRFCGKDVMFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F D+ S+NFRD+   ++IS DDFIRTTE RH     + WKK+ D G IY+G 
Sbjct: 62  NQNIDPQTFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWKKLLDNGAIYEGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDEA+Y++ E+    +         PV+W++E  YFF L+ +QDKLL +YE +
Sbjct: 122 YEGWYSVRDEAFYDESEI----NEDKLAPTGAPVEWVKEPSYFFNLAKWQDKLLEFYELN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ PI RRNEVISF+KSGLKDLS+SR TF WGIK+P++ ++++YVW+DAL NY++  G
Sbjct: 178 PDFVRPISRRNEVISFIKSGLKDLSISRTTFHWGIKVPNNRKHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    + AKFWPA+L ++GKDILRFHA+YWPAFL++A +PLPK +  HG+  ++G+KI
Sbjct: 238 YPDK-QSNYAKFWPANLQIVGKDILRFHAVYWPAFLMAAEIPLPKAIMVHGWWTNEGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI +I+E GVD +RYFL+RE+  G D  + ++ L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFARNNLITRINSELSNKIGNLLH 356

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           R VS + K+ D  +P    G   +  E  IL    +  QE    M    I++ L  +I+L
Sbjct: 357 RIVSFVYKNNDAKVPLIKSGVIDKIYELPILKTAIKFAQENILLMDKTEINKILENIINL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + + Y   + PW LK T+PD+   VLY  +EV+R +AI+LQ FVP  ANK+ D L V+
Sbjct: 417 AEDANIYITNEAPWNLKTTDPDKMLEVLYSLLEVLRYIAIMLQPFVPNSANKMLDQLGVS 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDP--IFPRF 510
            E R F+ L  D  LK G       +P  IFP+F
Sbjct: 477 KEERLFKHLVRDHALKAG---SNILEPSIIFPKF 507


>gi|307292797|ref|ZP_07572643.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880863|gb|EFN12079.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 520

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 243/510 (47%), Positives = 327/510 (64%), Gaps = 11/510 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+TAI+YPN +PHIGHAYE+I  D +ARF R+   DV F TGTDEHG K+A+ A+N G+ 
Sbjct: 7   ITTAISYPNGRPHIGHAYEVIATDAIARFQRMMDRDVFFQTGTDEHGLKMAQTARNRGIE 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  F+ M D L+ISYD FIRT+E  HH   + +W+ +   GD+Y G Y GWY
Sbjct: 67  PRELADEMSSYFKAMNDGLNISYDRFIRTSEPDHHSASQAIWQAMEANGDLYLGRYEGWY 126

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S+RDEA+Y++ E+ +G  GQ  + Q  PV+W  EE +FFRLSAYQ KLL  Y   P+FI 
Sbjct: 127 SVRDEAFYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYTGQPDFIQ 186

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RRNE++ FV+ GL DLS+SR +FDWG+K+P    ++MYVW+DALTNYLT  GY D+ 
Sbjct: 187 PDSRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYLTGCGYPDDL 246

Query: 249 DGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +   A++W       HVIGKDI+RFH +YWPAFL+SA LPLPK+VF HGF+L++GEK+SK
Sbjct: 247 E-RMARYWAEGGDITHVIGKDIVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRGEKMSK 305

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV DP+E+ E  GVD LRYFL+ E+  G DG Y  + +  R N+DLAN  GNL  R+
Sbjct: 306 SLGNVADPMELAERFGVDQLRYFLLSEVTFGNDGSYSAEAIVTRSNSDLANSFGNLAQRT 365

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S I K+ +G +P P A  E D  +L   +   Q  +  M +     A+   +  V   +
Sbjct: 366 LSFIAKNLEGRLPEP-APQEVDGDLLKTVAEAAQTFQAAMVDLAPSTAIEAWMRAVFACN 424

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y DAQ PW L+KT+P R   VL    E I  LAI++Q  +P  A+ + D + VA E R 
Sbjct: 425 AYIDAQAPWTLRKTDPARMEAVLATLYEAIAHLAIIVQPVIPASASALLDQMGVAGEGRN 484

Query: 486 FQSLDQRL-----KPGFMLHKTFDPIFPRF 510
           + ++           GF+L     P+FPR 
Sbjct: 485 YAAIGSGWYAALRASGFVLGAP-KPLFPRL 513


>gi|85708668|ref|ZP_01039734.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
 gi|85690202|gb|EAQ30205.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
          Length = 525

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/515 (48%), Positives = 333/515 (64%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E    YI+TAI YPN +PHIGHAYE I ADV+ARF RL G +V F TGTDEHG K+A+ A
Sbjct: 5   ENAPYYITTAINYPNGRPHIGHAYEGIAADVIARFQRLKGREVRFQTGTDEHGLKMARKA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G T +   D+ S  FR+M + L+I +D FIRT E  HH   + +W+++   GD+Y  
Sbjct: 65  EEQGRTPRDLADEMSGYFREMDEALNIDFDRFIRTVEPEHHRASQAIWERMEAAGDLYLD 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWYS+RDEAYY++ E+ +G   Q  + Q  PV+W  EE +FFRLS Y+  LL   ++
Sbjct: 125 RYEGWYSVRDEAYYDESELVEGEGEQKLSPQGTPVEWTVEESWFFRLSKYEKPLLDLLKT 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P F+ P  RRNE+I+FV+ GL+DLS+SR +FDWG+K+P    ++MYVW+DALTNYLT  
Sbjct: 185 -PGFLEPASRRNEMIAFVEQGLRDLSVSRTSFDWGVKVPGSDNHVMYVWVDALTNYLTGL 243

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D       KFWPA LH+IGKDI+RFH IYWPAFL+SANLP+PKKVF HGF+L++G+K
Sbjct: 244 GFPDE-TPEMEKFWPASLHLIGKDIVRFHTIYWPAFLMSANLPVPKKVFGHGFLLNRGQK 302

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
            SKSLGNV DP+E+ E+ GVD LRYFL+RE+A G+DG Y  + +  R NA+LAN  GNL 
Sbjct: 303 ESKSLGNVTDPLELAEQFGVDNLRYFLMREVAFGQDGSYSSEAIVTRTNAELANSFGNLA 362

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLV 421
            R++SMI K+ DG++  P    E D ++L+               QL      +V I  V
Sbjct: 363 QRTLSMIAKNMDGVL-EPFELAEVDTALLAAVKNACATDLPREFEQLAFSVGIEVWIKAV 421

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              ++Y D Q PW LKKT+P+R   VL      IR LAI +Q  VP+ A+ + D L V +
Sbjct: 422 YACNQYVDEQAPWTLKKTDPERMKAVLQTLFCAIRDLAIAIQPIVPEKASAVLDQLGVPE 481

Query: 482 ENRCFQSL------DQRLKPGFMLHKTFDPIFPRF 510
             R F+ L      D+  K G ++ K   PIFPR 
Sbjct: 482 NERQFEQLHDRSWFDRLAKSGHVVGKP-TPIFPRL 515


>gi|296116331|ref|ZP_06834947.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977150|gb|EFG83912.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 512

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/506 (47%), Positives = 331/506 (65%), Gaps = 2/506 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  + ADV+ARF RL G DV F TGTDEHGQK+ +AA  A
Sbjct: 4   RYYVTTPIYYVNGAPHIGHAYTSVAADVIARFKRLAGFDVFFLTGTDEHGQKVEQAAHTA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT     ++ + +FRDM D + ISYDDFIRTT+ RH +    LWKK+ + G IY G Y 
Sbjct: 64  GVTPIELANRVAADFRDMYDKMAISYDDFIRTTQPRHAEGAAALWKKLEENGHIYLGAYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY+LRDE +Y ++E+   ADG        PV+W++E  YFFRLS +QD+LL  YE+HP 
Sbjct: 124 GWYALRDECFYQEEELVIAADGTRTAPTGAPVEWVKEPSYFFRLSKFQDRLLELYETHPG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNEV SFV+ GL+DLS+SR +F+WGI +P DP+++MYVW+DAL NYL+  GY 
Sbjct: 184 FVEPAGRRNEVRSFVRGGLRDLSISRTSFNWGIPVPGDPKHVMYVWVDALANYLSAVGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D     +  FWPA+LH++GKDILRFHAIYWPA L+ A LPLP++VFSHG+    G+K+SK
Sbjct: 244 DE-GAPRWDFWPANLHLVGKDILRFHAIYWPALLMGAGLPLPERVFSHGWWTIAGQKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP +++ E G+D +R+FL+RE+  G D   ++  +  R+N +LAN +GNL  R+
Sbjct: 303 SLGNVLDPRDLVAEFGLDPVRFFLMREMPFGGDSDINRKAIITRMNVELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S I ++  G++P     T  D ++L+  S +   +   +  Q +  AL +V  ++   +
Sbjct: 363 LSQIARNCAGLLPERATPTAEDTALLAQASLLPDLMHGQIDRQALTDALEEVWKVIRASN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y D Q PW LKKT+P R + VL V  +V+R +A +LQ ++P   + +   L V    R 
Sbjct: 423 AYIDHQAPWALKKTDPQRMADVLRVLADVLRTIATVLQPYMPGSMDTMLTQLGVEATERD 482

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511
           F +L   L  G  L      IFPRF+
Sbjct: 483 FAALGTPLPAGRPLPAP-KGIFPRFV 507


>gi|157804069|ref|YP_001492618.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|157785332|gb|ABV73833.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 510

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/508 (48%), Positives = 342/508 (67%), Gaps = 13/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  +++DV+ARF RL G +V+  TGTDEHGQK+ KAA N  +
Sbjct: 6   YITTPIYYVNNVPHIGHAYTSVVSDVIARFMRLCGFEVILLTGTDEHGQKVEKAAINKNI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F DQ S NFR +   + IS DDFIRTTE RH +   + W+K+ D G IYKG Y GW
Sbjct: 66  DPQQFTDQISENFRHLMTSMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYKGFYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y++RDEA+Y++ E+   +DG         V+W++E  YFF LS +QDKLL  YE +P+FI
Sbjct: 126 YAVRDEAFYDESEL--TSDGLAPTGAS--VEWVKEPSYFFNLSKWQDKLLELYELNPDFI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PI RRNEVI+FVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY D 
Sbjct: 182 RPISRRNEVINFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGYPDE 241

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              +  KFWPA LHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISKSL
Sbjct: 242 -QSNYGKFWPAALHVVGKDILRFHAVYWPAFLMAAKIPLPKTIMAHGWWTNEGQKISKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+ +
Sbjct: 301 GNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRTTA 360

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVSEV 424
            + K+ DG +P            L +    ++   +N   M+   +++ L  +I+L  E 
Sbjct: 361 FVYKNNDGKVPLLTQSVIDKIYTLPILKAAIKCAEQNILLMEKTEVNKILENIINLAEEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D + PW LKKT+ D+   VLY  +EV+R +AI+LQ FVP  ANK+ D L V  + R
Sbjct: 421 NIYIDNKAPWNLKKTDHDKMLEVLYALLEVLRYIAIMLQPFVPTSANKMLDQLGVNKKER 480

Query: 485 CFQSL--DQRLKPG-FMLHKTFDPIFPR 509
            F+ L  D  L  G  +L  T   IFPR
Sbjct: 481 LFKHLVRDYALTVGAAILEPTI--IFPR 506


>gi|94496391|ref|ZP_01302968.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424137|gb|EAT09161.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 520

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/510 (46%), Positives = 332/510 (65%), Gaps = 11/510 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+TAI+YPN +PHIGHAYE+I  D +ARF R+ G DV F TGTDEHG K+A+ A+  G+ 
Sbjct: 7   ITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARARGIE 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  F+ M + L+IS+D FIRT+E  HH   + +W+ +   GD+Y G Y GWY
Sbjct: 67  PRALADEMAGYFKVMNEALNISHDRFIRTSEPDHHRASQAIWRAMEANGDLYLGRYEGWY 126

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S+RDEA+Y++ E+ +G  G   + Q+ PV+W  EE +FFRLSAYQDKLL+ YES P+FI 
Sbjct: 127 SVRDEAFYDEKELIEGEGGAKLSPQNTPVEWTVEESWFFRLSAYQDKLLALYESQPDFIQ 186

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RRNE++ FV+ GL DLS+SR +FDWG+++PD   ++MYVW+DALTNYLT  GY D+ 
Sbjct: 187 PESRRNEIMRFVEGGLSDLSISRTSFDWGVRVPDADGHVMYVWVDALTNYLTGCGYPDDA 246

Query: 249 DGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +   A++W       HVIGKDI+RFHA+YWPAFL+SA LPLPK++F HGF+L++GEK+SK
Sbjct: 247 E-RMARYWAEGGDITHVIGKDIVRFHAVYWPAFLMSAKLPLPKQIFGHGFLLNRGEKMSK 305

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV DP+E+ +  GVD LRYFL+ E+  G DG Y  + +  R N+DLAN  GNL  R+
Sbjct: 306 SLGNVADPMELADRFGVDQLRYFLLSEVTFGNDGSYSAEAIIARSNSDLANSFGNLAQRT 365

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S I K+ DG +P P A  E D ++LS  +   +  +  M +     A+   +  V   +
Sbjct: 366 LSFIAKNLDGRLPEPAAM-EVDSALLSGIADACRIFQNAMNDLAPSVAIEAWMRAVFACN 424

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y DAQ PW L+KT+P R   VL    E I  LA+++Q  +P  A  + D + +  + R 
Sbjct: 425 AYIDAQAPWALRKTDPARMEAVLATLYEAIASLAVMIQPVIPASAAALLDQMGIDADARS 484

Query: 486 FQSLDQRL-----KPGFMLHKTFDPIFPRF 510
           ++ +           GF L     P+FPR 
Sbjct: 485 YELIGSDFYAALRASGFALSPP-KPLFPRL 513


>gi|296535550|ref|ZP_06897732.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264136|gb|EFH10579.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 522

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/519 (47%), Positives = 344/519 (66%), Gaps = 17/519 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    + Y++T I Y N +PHIGHAY  + ADVLAR+ R+ G  V F TGTDEHGQK+ K
Sbjct: 1   MTSERRFYLTTPIYYVNDKPHIGHAYTSLAADVLARWKRMMGHQVHFLTGTDEHGQKVEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  + F DQ S+ FRD+A  ++ S DDFIRTTE+RH   C  LWK++ ++G+I+
Sbjct: 61  AAEARGMAPQDFTDQVSQAFRDLAVRMNYSNDDFIRTTEERHKLACAALWKRLEERGEIH 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY++RDEA+Y  DE+ +  DGQ +     PV+W+ E  YFFRLS +Q+KLL +Y
Sbjct: 121 LGHYEGWYAVRDEAFYGPDEITE-KDGQKFAPTGAPVEWVREPSYFFRLSNWQEKLLEFY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P  RRNEVISFVKSGL DLS+SR +F WG+K+P D  ++MYVW+DALTNY+T
Sbjct: 180 EANPDFIAPASRRNEVISFVKSGLTDLSISRTSFKWGVKVPGDEAHVMYVWLDALTNYIT 239

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY   PD S A   FWPAD+H +GKDILRFHAIYWPAFL++A LP P++VF+HG+  +
Sbjct: 240 ALGY---PDESAANWSFWPADVHFVGKDILRFHAIYWPAFLMAAGLPTPRRVFAHGWWTN 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G+KISKSLGNVIDP+ +IEE G+D +RYFL+RE+  G DG + +  L  R+N +LA+ +
Sbjct: 297 EGQKISKSLGNVIDPLALIEEFGLDPVRYFLLREVPFGSDGDFQRKALAARLNGELADAL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCS---------RVLQEIRENMQNQ 408
           GNL +R++S+I ++ +G++P P G   E+D + L+             +  ++   +  Q
Sbjct: 357 GNLANRTLSLIQRNCEGVLPEPAGTEAEADRAFLAETGLEIGADGTLALAAKVDALLNEQ 416

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
               AL+ V + + E + Y   ++PW LKKT+  R   VL    + +R  A LL+ F+P+
Sbjct: 417 KFDAALSLVFASIREANGYITREQPWALKKTDLARMRVVLRRLHDALRAFATLLEPFMPE 476

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
              K+ D L V  E R   +L   L PG +      P+F
Sbjct: 477 SMAKLLDQLGVPAEARSVAALATAL-PGGIALPPPSPLF 514


>gi|114327741|ref|YP_744898.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315915|gb|ABI61975.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 514

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/509 (46%), Positives = 333/509 (65%), Gaps = 5/509 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y +T I Y N  PHIGHAY  +  DVLAR+ RL+G +V F TGTDEHGQK+ KAA +A
Sbjct: 4   RYYCTTPIYYVNGAPHIGHAYTCVATDVLARWKRLEGREVFFLTGTDEHGQKVEKAAADA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  + F+D  +  FR MA+ ++ S+D FIRTTE  H      LW ++ ++G+IY G Y 
Sbjct: 64  GVDPQTFIDGMADGFRAMAEKMNTSHDRFIRTTEPEHKKAVAALWSRLEERGEIYLGSYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y +DE+    DG+ Y     PV+ + E  YFFRLS + D LL  YE  P+
Sbjct: 124 GWYAVRDEAFYGEDELTLKPDGKRYAPTGAPVERVTEPSYFFRLSRWGDALLKLYEDQPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFVK GL DLS+SR +F WG+ +P D ++++YVW+DALTNYLT  GY 
Sbjct: 184 FIAPQARRNEVISFVKQGLTDLSISRTSFSWGVPVPGDAKHVVYVWLDALTNYLTAVGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D        FWPADLH++GKDILRFHAI+WPAFL++A LPLP++VF+HG+   +GEK+SK
Sbjct: 244 DE-TSPAWPFWPADLHMVGKDILRFHAIFWPAFLMAAGLPLPRRVFAHGWWTVEGEKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN I+P  +++E G+D +R+FL+RE+  G DG + +  +  R+N +LAN +GNL  R+
Sbjct: 303 SLGNTIEPGALVDEFGLDPVRFFLLREVPFGNDGDFSRRAMIGRMNTELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S+I ++ DG +P  GA T  D ++L   + +  ++   +  Q  H AL +   ++   +
Sbjct: 363 LSLIARNCDGALPARGAETGEDATLLRDAASLPAKMGAQIDRQAFHEALEEAWKVIRAAN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADE 482
            Y D Q PW LKKT+PDR   VL V  +V+R +A ++Q FVP  A ++   L V   A E
Sbjct: 423 GYIDRQAPWALKKTDPDRMRDVLRVLADVLRIIATVMQPFVPGSAARMLVQLGVREAAGE 482

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
              F +L+  L+ G  L      IFPRF+
Sbjct: 483 QVPFAALETHLEEGTRLPAP-QGIFPRFV 510


>gi|162147584|ref|YP_001602045.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542217|ref|YP_002274446.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786161|emb|CAP55743.1| Methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529894|gb|ACI49831.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 512

 Score =  498 bits (1282), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/508 (46%), Positives = 334/508 (65%), Gaps = 6/508 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  + AD++ARF RL G DV F TGTDEHGQK+ +AAQ A
Sbjct: 4   RYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAAQAA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    F D+ S +FR M DV+++SYDDFIRTTE RH      LW++I+  G IY G Y 
Sbjct: 64  GLAPIAFADRVSADFRAMYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY+LRDE++YN+DE+    DG        PV+W+ E  YFFRLSA+ D+LL  YE+ P 
Sbjct: 124 GWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVREPSYFFRLSAFADRLLDLYETRPG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNEV SFV+ GL+DLS+SR +F WGI +P D  ++MYVW+DAL NYL+  G+ 
Sbjct: 184 FVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAIGFP 243

Query: 246 D--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           D  NP   +A FWPA+LH++GKDI+RFHAIYWPA L++A L LP  VFSHG+   +GEK+
Sbjct: 244 DARNP---RAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKM 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP +++ E G+D +R+FL+RE+  G D    +  +  R+N +LAN +GNL  
Sbjct: 301 SKSLGNVVDPRDLVAEFGLDPVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQ 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++S + ++  G++P  G  T+ D ++L+    +   + E +  + +  AL +V  ++  
Sbjct: 361 RTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHEQIDRRALTDALEEVWRVIRA 420

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + Y D Q PW LKKT+PDR + VL V V+ +R +  +LQ ++P   + +   L VA++ 
Sbjct: 421 CNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDE 480

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F SL   L PG         IFPR++
Sbjct: 481 RDFASLATPL-PGGRALPPPQGIFPRYV 507


>gi|326387756|ref|ZP_08209362.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207802|gb|EGD58613.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 541

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 250/520 (48%), Positives = 337/520 (64%), Gaps = 20/520 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I ADV+ RF R  G D    TGTDEHG K+A+ A++
Sbjct: 14  EPYYITTAISYPNGKPHIGHAYEAIAADVIVRFMRAMGRDARLQTGTDEHGLKMAQKARD 73

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   DQ S+ F+DM   L++ YD FIRTTE RHH+  + LW+++   GD+Y   Y
Sbjct: 74  LGLTAKELADQMSQYFKDMCAALNVGYDVFIRTTEDRHHEASQELWRRMKANGDLYLDRY 133

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEAYY++ E+  G  GQ  + Q  PV+W  EE +FFRLSAY DKLL+ Y  +P
Sbjct: 134 EGWYSIRDEAYYDESELVAGEGGQKLSPQGTPVEWTVEESWFFRLSAYGDKLLTLYNENP 193

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------DDPQYIMYVWIDALT 236
           EFI P  RRNE++ FV+ GL+DLS+SR +FDWGIK+P        DD  ++MYVW+DALT
Sbjct: 194 EFIRPESRRNEIMRFVEGGLRDLSVSRTSFDWGIKVPVHGEGETSDD--HVMYVWVDALT 251

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT  G+ +  +  + KFWPA+LH+IGKDI+RFH +YWPAFL+SA LP+P++VF HGF+
Sbjct: 252 NYLTGLGWPEETEEFR-KFWPANLHLIGKDIIRFHTVYWPAFLMSAGLPVPRQVFGHGFL 310

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L++G+K SKSLGNV DP+++    GVD LRYF +RE+  G+DG Y  + +  R NA+LAN
Sbjct: 311 LNRGQKESKSLGNVTDPLDLAARFGVDPLRYFFLREVVFGQDGSYSPEAIATRCNAELAN 370

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALA 415
             GNLV R++SMI K+  G + T  + TE+DE++L+  +   +E +    +       L 
Sbjct: 371 SYGNLVQRTLSMIFKNCGGELATFSS-TEADEALLATVAAATREDLPREFEALNFSAGLE 429

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +  V   + Y D Q PW L+KT+P+R   VLY     IR L I +Q  VP  A K+ D
Sbjct: 430 AWMRAVFACNAYVDEQAPWALRKTDPERMRAVLYTLFMAIRDLTIAIQPVVPATAAKVLD 489

Query: 476 ILFVADENRCFQSLDQ------RLKPGFMLHKTFDPIFPR 509
            L V ++ R    L +      R+  G  L     P FPR
Sbjct: 490 QLGVPEDQRGIADLPRADWYMARVATGERLAAPV-PAFPR 528


>gi|87199956|ref|YP_497213.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135637|gb|ABD26379.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 521

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/512 (47%), Positives = 331/512 (64%), Gaps = 8/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I ADV+ARF R  G DV F TGTDEHG K+A+ A+ 
Sbjct: 3   EPFYITTAISYPNGKPHIGHAYEAIAADVIARFQRAMGRDVRFQTGTDEHGLKMAQKARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ S  F  M D L++SYD FIRTTE+RHH + + LW+++   GD+Y   Y
Sbjct: 63  LGITPRELSDEMSSYFIKMCDELNVSYDVFIRTTEERHHASTQELWRRMEANGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+  G  G+  + Q  PV W  EE +FFRLS Y + LL  YE +P
Sbjct: 123 EGWYSVRDEAFYDESELVAGEGGEKLSPQGTPVDWTVEESWFFRLSKYAEPLLKLYEENP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI P  RRNEV+ FV+ GL+DLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  G+
Sbjct: 183 GFIQPDSRRNEVMRFVEGGLRDLSVSRTSFDWGVKVPGCDGHVMYVWVDALTNYITGLGF 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  +G  AK+WPA+LH+IGKDI+RFH +YWPAFL+SA++ LP++VF HGF+L++G+K S
Sbjct: 243 PDE-NGDFAKYWPANLHLIGKDIVRFHTVYWPAFLMSADIALPRQVFGHGFLLNRGQKES 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP+++ +  GVD LRYFL+RE+A G+DG Y  + +  R NA+LAN  GNLV R
Sbjct: 302 KSLGNVTDPLDLADRFGVDPLRYFLMREVAFGQDGSYSAEAIVTRCNAELANSYGNLVQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SMI K+  G + T  +    DE + +V +   +E+            +   +  V   
Sbjct: 362 TLSMIFKNMGGNLETFHSNVGDDELLATVFNACREELPREFSALNFSAGIEAWMRAVFAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW L+KT+P+R   VL      IR L + +   VP  A K+ D L +  E R
Sbjct: 422 NAYVDEQAPWALRKTDPERMKAVLLTLFIAIRDLTVAISPVVPAAAAKVLDQLGIPREAR 481

Query: 485 CFQSLD------QRLKPGFMLHKTFDPIFPRF 510
            F +L        R+  G  L +   P FPR 
Sbjct: 482 GFDALTDADWYMARVATGERLAQPM-PAFPRL 512


>gi|289704778|ref|ZP_06501199.1| methionine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558494|gb|EFD51764.1| methionine--tRNA ligase [Micrococcus luteus SK58]
          Length = 541

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/531 (46%), Positives = 334/531 (62%), Gaps = 26/531 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y++TAI+YPN +PHIGHAYE I +D +ARF RLDG DV F TGTDEHGQK+ + AQ
Sbjct: 5   RAPYYLTTAISYPNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKMEQTAQ 64

Query: 64  NAGVTTKVFVDQNSRNFRDMAD-VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             GV+      +N+  FR+M D VLDISYD FIRTT+  H +  R +W+++   GDIY G
Sbjct: 65  QQGVSALELATRNAAVFREMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGDIYLG 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y+GWYS+RDE Y+ +DE   G DG     +    V W EEE YFFRLS YQ  LL +Y 
Sbjct: 125 SYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLLDHYR 184

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-----------YIMYV 230
            HP+F  P  R NEVI FV++GL+DLS+SR +F WGI +P               ++ YV
Sbjct: 185 EHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPDAADADRRADHVTYV 244

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           W+DALTNYLT  G+      + A++WPADLHVIGKDI RFH I+WPAFL+SA L LP++V
Sbjct: 245 WVDALTNYLTGAGWPAEDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLELPRRV 304

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
             HGF+ + G K+SKSLGNV+ P E +   G+DA+R+FL+RE   G DG Y  + +  R 
Sbjct: 305 MIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAVVSRK 364

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           NADLAN +GNL  RS+SM+ K+    +P PG  T++D ++L+    +L+  R     Q  
Sbjct: 365 NADLANNLGNLAQRSLSMVAKNCGAAVPEPGELTDADRAVLAQVDALLERSRSAYAVQDF 424

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           H AL +   ++ EV+ YF  Q PW L+KT+  R  TVLYVT++ +R++A+L Q  +P  A
Sbjct: 425 HDALEETWRVLGEVNAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVMPDSA 484

Query: 471 NKIFDILFVADEN------------RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +++ D+L V  E             R F +  + L PG  L     P+FPR
Sbjct: 485 SRLLDLLGVPAEGDAGRTGASGTGPRSFAAFHEDLVPGTPLPAP-QPVFPR 534


>gi|294011648|ref|YP_003545108.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674978|dbj|BAI96496.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 520

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/510 (46%), Positives = 329/510 (64%), Gaps = 11/510 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+TAI+YPN +PHIGHAYE+I  D +ARF R+ G DV F TGTDEHG K+A+ A++  + 
Sbjct: 7   ITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARSRDME 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  FR M D L+ISYD FIRT+E  HH   + +W+ +   GD+Y G Y GWY
Sbjct: 67  PRALADEMSGYFRAMNDGLNISYDRFIRTSEPDHHRASQAIWQAMEANGDLYLGRYEGWY 126

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S+RDEA+Y++ E+ +G  GQ  + Q  PV+W  EE +FFRLSAYQ KLL  Y + P+FI 
Sbjct: 127 SVRDEAFYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYANQPDFIQ 186

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RRNE++ FV+ GL DLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  GY D+ 
Sbjct: 187 PDSRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYITGCGYPDDT 246

Query: 249 DGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +   A++W       H+IGKDI+RFH +YWPAFL+SA LPLPK+VF HGF+L++GEK+SK
Sbjct: 247 E-RMARYWSEGGDITHIIGKDIVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRGEKMSK 305

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV DP+E+ E  GVD LRYFL+ E+  G DG Y  + +  R N+DLAN  GNL  R+
Sbjct: 306 SLGNVADPMELAERFGVDQLRYFLLSEVTFGNDGSYSAEAIVARSNSDLANSFGNLAQRT 365

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S I K+ +G +P   A  + D  +L+      +  +  M +     A+   +  V   +
Sbjct: 366 LSFIAKNLEGRLPETAA-QDVDRDLLATVGEAARTFQAAMADLAPSTAIEAWMRAVFACN 424

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y DAQ PW L+KT+P R   VL    E I  LAI++Q  +P  A  + + + +A++ R 
Sbjct: 425 AYIDAQAPWTLRKTDPARMEAVLATLYEAIADLAIVIQPIIPASAAALLEQMGIAEDGRS 484

Query: 486 FQSLDQ----RLKP-GFMLHKTFDPIFPRF 510
           + ++      RL+  GF L     P+FPR 
Sbjct: 485 YAAIGSDWYARLRASGFTLSAP-KPLFPRL 513


>gi|190570583|ref|YP_001974941.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190356855|emb|CAQ54226.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 509

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/513 (48%), Positives = 344/513 (67%), Gaps = 9/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T I Y N +PHIGHAY  +I DV ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFESFYITTPIYYVNDKPHIGHAYTSLICDVAARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  K F D+ S  FR +A++++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKTKGIEPKEFTDEISVTFRKLAELMNFDYDDFIRTTEERHEKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+  G            VQW++EE YFFRLS++Q+KLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESELIYGR-----APTGAEVQWIKEESYFFRLSSWQNKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+ P FI P  R+NEV+SFVKSGL DLS+SR +F+WGIK+P++ ++++YVWIDALTNYLT
Sbjct: 176 ENQPNFIFPESRKNEVVSFVKSGLTDLSISRTSFNWGIKVPENDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA--DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+ +  D    KFW    ++HVIGKDILRFHA+YWPA LL+A+LPLPK++  HG+ L+
Sbjct: 236 SIGFPNIEDEEYKKFWTNSFNVHVIGKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLN 295

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +GEKISKSLGNVIDPI + EE GVD LRYFL+RE + G+DG + K  +  R+N++LAN I
Sbjct: 296 EGEKISKSLGNVIDPINLAEEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNI 355

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV R++S + K   G++P        D+  L  C  ++ ++ +++     ++ +  +I
Sbjct: 356 GNLVQRTISFLHKQCFGVVPVVDRNLLKDDESLPNCKAIIDQVMDHLSKYEFNQIILLII 415

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++ S+ + Y D   PW L KT+ +R   V+Y  +E IR + ILLQ  VPK A  I D L 
Sbjct: 416 NISSKANAYIDKSAPWTLSKTDRERMDLVIYKLLEYIRMIGILLQPIVPKSAKMILDQLQ 475

Query: 479 VADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           +  E R  +SL +  +  G  L K   PIF RF
Sbjct: 476 IPKEQRDLKSLCNACVSLGITLPKP-TPIFLRF 507


>gi|239917380|ref|YP_002956938.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414136|ref|ZP_06245878.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838587|gb|ACS30384.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 541

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/531 (46%), Positives = 332/531 (62%), Gaps = 26/531 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y++TAI+YPN +PHIGHAYE I  D +ARF RLDG DV F TGTDEHGQK+ + AQ
Sbjct: 5   RAPYYLTTAISYPNGEPHIGHAYEYIATDAMARFQRLDGRDVRFLTGTDEHGQKMEQTAQ 64

Query: 64  NAGVTTKVFVDQNSRNFRDMAD-VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             GV+      +N+  F++M D VLDISYD FIRTT+  H +  R +W+++   GDIY G
Sbjct: 65  QQGVSALELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGDIYLG 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y+GWYS+RDE Y+ +DE   G DG     +    V W EEE YFFRLS YQ  LL +Y 
Sbjct: 125 SYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLLDHYR 184

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-----------PQYIMYV 230
            HP+F  P  R NEVI FV++GL+DLS+SR +F WGI +P               ++ YV
Sbjct: 185 DHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPEAADADRRADHVTYV 244

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           W+DALTNYLT  G+      + A++WPADLHVIGKDI RFH I+WPAFL+SA L LP +V
Sbjct: 245 WVDALTNYLTGAGWPAGDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLELPHRV 304

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
             HGF+ + G K+SKSLGNV+ P E +   G+DA+R+FL+RE   G DG Y  + +  R 
Sbjct: 305 MIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAVVSRK 364

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           NADLAN +GNL  RS+SM+ K+    +P PG  TE+D ++L+    +L+  R     Q  
Sbjct: 365 NADLANNLGNLAQRSLSMVAKNCGAAVPEPGELTEADRAVLAQVDALLERSRSAYAVQDF 424

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           H AL +   ++ EV+ YF  Q PW L+KT+  R  TVLYVT++ +R++A+L Q  +P  A
Sbjct: 425 HDALEETWRVLGEVNAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVMPDSA 484

Query: 471 NKIFDILFVADEN------------RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +++ D+L V  E             R F +  + L PG  L     P+FPR
Sbjct: 485 SRLLDLLGVPAEGDAGRTGASGSGPRSFAAFHEDLVPGTPLPAP-QPVFPR 534


>gi|326403063|ref|YP_004283144.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325049924|dbj|BAJ80262.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 511

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/506 (46%), Positives = 327/506 (64%), Gaps = 2/506 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  + ADVLARF RLDG DV F TGTDEHGQK+   A+  
Sbjct: 4   KFYITTPIYYVNGAPHIGHAYTSVAADVLARFKRLDGFDVHFLTGTDEHGQKVEATARAN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F D+ +  FR MA  ++IS DDFIRTTE RH  +C+ +W+ I   G I  G Y 
Sbjct: 64  NIAPQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y++ E+  GADG   +    PV+W+ E  YFF+LS +QD+LL  YE +PE
Sbjct: 124 GWYAVRDEAFYDESELVTGADGIKRSPFGAPVEWVREPSYFFKLSTFQDRLLKLYEDNPE 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P   RNEV+SFV+SGL+D+S+SR +F WGI +P  P ++MYVWIDALTNYLT  GY 
Sbjct: 184 FIQPASSRNEVLSFVRSGLRDISISRTSFKWGIPVPGAPDHVMYVWIDALTNYLTACGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  D    K+WPADLH++GK+I RFHA+YWPA L++A LP+P+++F++G+   +GEK+SK
Sbjct: 244 DM-DAPLMKYWPADLHLVGKEITRFHAVYWPAMLMAAGLPVPRRIFANGWWTIEGEKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N +    +I E G+D LR+ L+RE+  G DG + +  +  R+N +LAN +GNL  R+
Sbjct: 303 SLNNALAVEPLIAEFGLDQLRFCLLREMPFGNDGNFSRRSVITRINVELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S I K+  G++P  G   E+D ++ ++   +   +R+ M       A+ +V  LV   +
Sbjct: 363 LSFIAKNAGGVVPEAGPAAEADHALRAIADGLPDRMRDAMDRLAYQEAIEEVWKLVRAAN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y D Q PW L+KT+P R  TVL    E +R + ILLQ F+P+   K+ D L +  + R 
Sbjct: 423 AYIDHQAPWALRKTDPQRMLTVLRTLCEALRVVGILLQPFMPEAMAKLLDQLALPADRRG 482

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511
           F SL   L  G +L      +FPR +
Sbjct: 483 FASLATPLDAGAVLPPP-SGLFPRIV 507


>gi|148259982|ref|YP_001234109.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401663|gb|ABQ30190.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 511

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/506 (46%), Positives = 327/506 (64%), Gaps = 2/506 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  + ADVLARF RLDG DV F TGTDEHGQK+   A+  
Sbjct: 4   KFYITTPIYYVNGAPHIGHAYTSVAADVLARFKRLDGFDVHFLTGTDEHGQKVEATARAN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F D+ +  FR MA  ++IS DDFIRTTE RH  +C+ +W+ I   G I  G Y 
Sbjct: 64  NIAPQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y++ E+  GADG   +    PV+W+ E  YFF+LS +QD+LL  YE +PE
Sbjct: 124 GWYAVRDEAFYDESELVTGADGIKRSPFGAPVEWVREPSYFFKLSMFQDRLLKLYEDNPE 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P   RNEV+SFV+SGL+D+S+SR +F WGI +P  P ++MYVWIDALTNYLT  GY 
Sbjct: 184 FIQPASSRNEVLSFVRSGLRDISISRTSFKWGIPVPGAPDHVMYVWIDALTNYLTACGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  D    K+WPADLH++GK+I RFHA+YWPA L++A LP+P+++F++G+   +GEK+SK
Sbjct: 244 DM-DAPLMKYWPADLHLVGKEITRFHAVYWPAMLMAAGLPVPRRIFANGWWTIEGEKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N +    +I E G+D LR+ L+RE+  G DG + +  +  R+N +LAN +GNL  R+
Sbjct: 303 SLNNALAVEPLIAEFGLDQLRFCLLREMPFGNDGNFSRRSVITRINVELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S I K+  G++P  G   E+D ++ ++   +   +R+ M       A+ +V  LV   +
Sbjct: 363 LSFIAKNAGGVVPEAGPAAEADHALRAIADGLPDRMRDAMDRLAYQEAIEEVWKLVRAAN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y D Q PW L+KT+P R  TVL    E +R + ILLQ F+P+   K+ D L +  + R 
Sbjct: 423 AYIDHQAPWALRKTDPQRMLTVLRTLCEALRVVGILLQPFMPEAMAKLLDQLALPADRRG 482

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRFL 511
           F SL   L  G +L      +FPR +
Sbjct: 483 FASLATPLDAGAVLPPP-SGLFPRIV 507


>gi|149184557|ref|ZP_01862875.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831877|gb|EDL50310.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 519

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/515 (47%), Positives = 333/515 (64%), Gaps = 21/515 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI YPN +PHIGHAYE + ADV+ARF RL G DV F TGTDEHG K+A+ A++ G 
Sbjct: 6   YITTAIHYPNGKPHIGHAYETVAADVIARFQRLMGRDVRFQTGTDEHGLKMAQKARDLGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+ S  F+D+ D LDI+YD FIRTT++ HH   R +W+ +  K D+Y   Y GW
Sbjct: 66  TPRELADEMSGAFKDLFDRLDITYDRFIRTTDEDHHKASRAIWEAMEAKSDLYLDRYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+RDEAYY++ E+ +G  G+  + Q  PV+W EEE +FFRLS Y + LL    + P F+
Sbjct: 126 YSVRDEAYYDEKELVEGEGGEMLSPQGTPVEWTEEETWFFRLSKYAEPLLELLNT-PGFL 184

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNE+I+FV+ GLKDLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  GY   
Sbjct: 185 EPASRRNEMIAFVEGGLKDLSVSRTSFDWGVKVPGADNHVMYVWVDALTNYITGVGY--- 241

Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           PDG +   K+WPA LH+IGKDI+RFH +YWPAFL+SAN+PLPK+VF HGF+L++G K SK
Sbjct: 242 PDGGEMWDKYWPASLHLIGKDIVRFHTVYWPAFLMSANIPLPKQVFGHGFLLNRGVKESK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV DPIE+I+  GVD+LRYFL+ E+  GKDG Y  + L  +VNA+LAN  GNL  R+
Sbjct: 302 SAGNVTDPIELIDLFGVDSLRYFLMAEVVFGKDGSYSAEALVNKVNAELANSFGNLAQRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLV 421
           +SMI K+ DG + T     E++    ++ + V +  RE +  +         +   +  V
Sbjct: 362 LSMIHKNMDGKLET----FETNGDDKTLLATVQEACRETLPREFEALNFSVGIEAWLKAV 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              + Y D Q PW LKK++P+R   VL   +  IR LAI +Q  VP  A  + D L V  
Sbjct: 418 FACNAYVDEQAPWGLKKSDPERMKAVLQTLLLAIRDLAIAIQPVVPTKAAAVLDQLGVTP 477

Query: 482 ENRCFQSLDQR------LKPGFMLHKTFDPIFPRF 510
           + R +  L         +  G ++ K   P FPR 
Sbjct: 478 DRRSYADLSDEGWFGSLVAAGHVVEKP-TPAFPRL 511


>gi|103486745|ref|YP_616306.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976822|gb|ABF52973.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/516 (45%), Positives = 335/516 (64%), Gaps = 9/516 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++    YI+TAI+YPN +PHIGHAYE I  DV+ARF R  G +V   TGTDEHG K+ + 
Sbjct: 3   QQSAPFYITTAISYPNGRPHIGHAYEAIATDVMARFQRARGRNVRLVTGTDEHGLKMFQT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G  T    ++ S  FR+M   L+ISYD F+RT++  HH   + +WK +   GD+Y 
Sbjct: 63  ARDQGRATIDLANEMSGYFREMYAKLNISYDMFMRTSDPAHHAASQAIWKAMEANGDLYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWYS+RDEA+Y++ E+  G +G   + Q  PV+W  EE +FFRLS YQD+LL+ Y 
Sbjct: 123 DRYEGWYSVRDEAFYDESELTDGGEGIRLSPQGTPVEWTVEESWFFRLSNYQDRLLALYR 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNEV+ FV+ GLKDLS+SR +FDWG+ +P  P ++MYVW+DALT YL+ 
Sbjct: 183 DNPDFIRPESRRNEVLRFVEGGLKDLSVSRTSFDWGVPVPGSPGHVMYVWVDALTTYLSG 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D P      FWPA++H+IGKDI+RFH +YWPAFL+SANLPLP++VF HGF+L++GE
Sbjct: 243 LGYPD-PASDFGTFWPANIHMIGKDIVRFHTVYWPAFLMSANLPLPRQVFGHGFLLNRGE 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP+ + E  GVDALRY+L+RE++ G+DG Y  + + +  NADLAN  GNL
Sbjct: 302 KMSKSLGNVVDPMALAERFGVDALRYYLLREVSFGQDGSYSAEAIVRTANADLANSFGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR-ALAQVISL 420
             RS+SMI K+  G +       + D  +  + +   +++      QL     + + +  
Sbjct: 362 AQRSLSMIFKNLGGELSADYTPAQDDIDLFHLVNLSAKDLLPRAFEQLAFSVGIEEWLRA 421

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V   ++Y DAQ PW L+K++P+R   VL    + +R LAI ++  VP  A+ + D + +A
Sbjct: 422 VFACNQYVDAQAPWALRKSDPERMRVVLMTLFQAVRTLAIAIRPVVPTAADNLLDQMGIA 481

Query: 481 DENRCFQSLD-----QRLKP-GFMLHKTFDPIFPRF 510
            + R F +L       RL   GF + +   PIFPR 
Sbjct: 482 PDARDFAALADADWFARLAASGFTVGQPV-PIFPRL 516


>gi|51473863|ref|YP_067620.1| methionyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826289|sp|Q68W54|SYM_RICTY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51460175|gb|AAU04138.1| MetRS [Rickettsia typhi str. Wilmington]
          Length = 507

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/513 (47%), Positives = 338/513 (65%), Gaps = 15/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N   HIGHAY  + +DV+ARF R  G DV+F TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDVMFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F D+ S+NFRD+   ++IS DDFIRTTE RH     + W+K+ D G IY+G 
Sbjct: 62  NKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDEA+Y++ E+ +            PV+W++E  YFF L+ +QDKLL +YE +
Sbjct: 122 YEGWYSVRDEAFYDESEITEDKLA----PTGAPVEWVKEPSYFFNLAKWQDKLLEFYELN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  G
Sbjct: 178 PDFVRPISRRNEVISFVKSGLKDLSISRTTFNWGIKVPNNEKHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    + +KFWPA+L V+GKDILRFHA+YWPAFL++A +  PK +  HG+  + G+KI
Sbjct: 238 YPDQ-QSNYSKFWPANLQVVGKDILRFHAVYWPAFLMAAEISPPKSIMVHGWWTNAGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI +I+E GVD +RYFL+RE+  G D  + ++ L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFTRNNLITRINSELSNKIGNLLH 356

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           R VS +  + D  +P    G   +  E  IL    +  QE    M    I++ L  +I+L
Sbjct: 357 RIVSFVYNNNDAKVPLIKSGVIDKIYELPILKTAMKFAQENILLMDKIEINKILENIINL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + + Y   + PW LKKT+ D+   VLY  +EV+R +AI+LQ FVP  ANK+ D L VA
Sbjct: 417 AEDANIYIANEAPWNLKKTDYDKMLEVLYTLLEVLRYVAIMLQPFVPSSANKMLDQLGVA 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDP--IFPR 509
            E R F+ L  D  LK G       +P  IFP+
Sbjct: 477 KEERLFKHLVRDHALKAG---SNILEPSIIFPK 506


>gi|219123327|ref|XP_002181978.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406579|gb|EEC46518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 574

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/506 (46%), Positives = 338/506 (66%), Gaps = 11/506 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y N +PHIGHAY     DV+ARF RL G DV F +GTDEHG+K+ ++A+   + 
Sbjct: 64  ITTPIYYVNDKPHIGHAYTSTACDVIARFMRLSGRDVFFLSGTDEHGEKVEQSAEKQNMD 123

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + FVDQ S NFR++ ++++IS D FIRTT + H  + +  W  + +KG IY G YSGWY
Sbjct: 124 PQGFVDQVSVNFRELLELMNISNDKFIRTTSEDHKKSVQHFWNVMVEKGYIYMGTYSGWY 183

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEFI 187
           S+RDE +Y + E+    DG+        V W+ +EE YFF+LS +++KLL  YE +P FI
Sbjct: 184 SVRDECFYTESELI---DGKAPTGAE--VSWVAKEESYFFKLSQFEEKLLDLYERNPHFI 238

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  R+NEV+SFVK GL+DLS+SR +F WG+ +PDD  ++MYVW+DALTNY++  GY D 
Sbjct: 239 APESRKNEVVSFVKGGLRDLSISRTSFKWGVPVPDDEDHVMYVWVDALTNYISALGYPDM 298

Query: 248 PDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
            +GS  +KFWPA +H++GKDILRFHA+YWPA L++A LPLPK++F+HG+    G+KISKS
Sbjct: 299 GEGSDFSKFWPASIHIVGKDILRFHAVYWPAMLMAAELPLPKRLFAHGWWTKDGQKISKS 358

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNVIDP+E++ + GVD  R+FL+ E+  G DG +    + ++ N +LAN +GNL  R++
Sbjct: 359 IGNVIDPVELVNKYGVDQTRFFLMSEVNFGNDGDFSDRAMIQKCNTNLANELGNLCQRTL 418

Query: 367 SMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           S++ K+ +  +P P GA+T  DE++L     +  ++   +  Q I + +  ++ ++ E +
Sbjct: 419 SLVFKNCEKAVPNPVGAYTPEDEALLESARNLRNKVATEISQQSILKYVHAMVEMIWEAN 478

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +Y D   PW LKKT+P+R +TVLYV +EV+R  AIL Q  +P+ A KI D L V    R 
Sbjct: 479 KYIDEMAPWALKKTDPERMATVLYVLLEVLRYSAILYQPLIPESAGKILDQLTVPANERT 538

Query: 486 FQSLDQR--LKPGFMLHKTFDPIFPR 509
           F  L +   +K G  + K    IFPR
Sbjct: 539 FLHLSEEYSIKAGAAISKPVG-IFPR 563


>gi|20806639|ref|NP_621810.1| methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|25009362|sp|Q8RDD1|SYM_THETN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|20515086|gb|AAM23414.1| Methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 638

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 234/508 (46%), Positives = 339/508 (66%), Gaps = 6/508 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+   +DISYD FIRTT+  H +  + ++ K+ ++GDIYKG 
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKTMDISYDHFIRTTDAYHEEIVQKIFMKLYEQGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +    PV+ + EEGYFFRLSAY DKLL YYE H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVTEEGYFFRLSAYGDKLLKYYEEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+K+GL+DL +SR TFDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKAGLEDLFVSRSTFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPKKVF HG+++ +G K+
Sbjct: 238 YMTENDEKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E+++  GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVDRYGVDAIRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P P +  E DE +++V   + Q++ E M       AL ++  LVS 
Sbjct: 358 RTVTMIEKYFDGVLPKPSSQEEIDEDLINVAQNLPQKVEEYMDKLQFSNALIEIWKLVSR 417

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K    R    TVLY   E +R + IL+  F+P    K+F+ L + +
Sbjct: 418 ANKYIDETMPWVLAKDESKRGRLGTVLYNLAESLRFIGILISPFMPNTPKKMFEQLGITE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +   ++SL   L       K  + +FPR
Sbjct: 478 DLTTWESLKFGLLKEGTRVKRGEILFPR 505


>gi|71083692|ref|YP_266412.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062805|gb|AAZ21808.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 513

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/470 (47%), Positives = 326/470 (69%), Gaps = 1/470 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+A+PH+GHAY  I+AD  ARF R+DG +V F TGTDEHG KI +AA+   +
Sbjct: 6   YITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAAERKKI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F D+ S+ FRD++  L++S  DFIRTTE+RH  T + LW ++    DIY   YSGW
Sbjct: 66  DPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKYSGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+ DEAYY+D+E+ +  + +   +  + V+W+EEE YFFRLS +QD+LL YYE +P+FI
Sbjct: 126 YSVSDEAYYSDEEISEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEKNPDFI 185

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  R+NEVISFVK GLKDLS+SRK F WGIK+P+   +++YVW+DALTNYL+   Y D 
Sbjct: 186 SPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYLSALNYPDT 245

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            D    KFWPA +H+IGKDILRFH++YWPAFL++A +PLPKKV+ HG+IL   EK+SKS 
Sbjct: 246 NDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEKMSKSK 305

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN++DP+++IE  G+D LRY+L++E++ G DG   +D L+  +N+DLAN  GNL  R  +
Sbjct: 306 GNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLCQRVTA 365

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
              K+   ++P    F + D  +L+  +  L  IR  + NQ I+  +  ++S + E ++Y
Sbjct: 366 FAEKNCSSLVPDNTKFNDEDLVMLNKFTDNLDLIRTEIDNQNINYYINFIVSALFEANKY 425

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           F+ Q+PW+ KK + DR +T++Y ++E+IR+++ +L   +P    K   I 
Sbjct: 426 FNDQEPWK-KKDDKDRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIF 474


>gi|85374072|ref|YP_458134.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787155|gb|ABC63337.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 519

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/512 (46%), Positives = 327/512 (63%), Gaps = 9/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I ADV+ARF R  GLDV F TGTDEHG K+A+ A+ 
Sbjct: 3   EPFYITTAISYPNGRPHIGHAYEAIAADVIARFQRQRGLDVRFQTGTDEHGLKMARKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +   D+ S  F+ M D L++S D FIRT +  HH   + +W+ +   GD+Y   Y
Sbjct: 63  QGKSPRDLADEMSGYFKAMCDALNVSCDRFIRTVDDDHHRASQAIWRAMEAAGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEAYY++ E+  G   +  + Q  PV+W  EE +FFRLS Y+DKLL   ES P
Sbjct: 123 EGWYSVRDEAYYDESELVDGEGDEKLSPQGTPVEWTVEESWFFRLSKYEDKLLKLLES-P 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  RRNE+++FVK GL+DLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  GY
Sbjct: 182 GFLEPASRRNEMVAFVKQGLRDLSVSRTSFDWGVKVPGSEDHVMYVWVDALTNYITGLGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+ +  + K WPADLH+IGKDI+RFH IYWPAFL+SA LP+PK+VF HGF+L  G K S
Sbjct: 242 PDDTELWR-KHWPADLHLIGKDIVRFHTIYWPAFLMSAGLPVPKQVFGHGFVLKDGRKES 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP ++ +  GVDALRYFL+RE++ G DG +  + +  RVNA+LAN  GNL  R
Sbjct: 301 KSLGNVTDPHDLADFYGVDALRYFLMREVSFGSDGNWSHEAIVTRVNAELANSFGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SMI K+ DG +    A  E    + +V +   + +    +       + + I  V   
Sbjct: 361 TLSMIHKNMDGSLEKFEARGEDKALLQTVLTACRESLPREFEKLAFSVGIDEWIKAVYAC 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++Y D Q PW L+KT+P+R   VL   +  I  LAI +Q  +P+ A  + D L V  + R
Sbjct: 421 NQYVDEQAPWALRKTDPERMKAVLQTLLMAIHDLAIAIQPVIPEKAGALLDDLGVPTDRR 480

Query: 485 CFQSL------DQRLKPGFMLHKTFDPIFPRF 510
            +  +      +Q +  GF + K   P FPR 
Sbjct: 481 TYDHISGEGWFNQLVAEGFTVPKP-TPAFPRL 511


>gi|68171729|ref|ZP_00545082.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88657921|ref|YP_507787.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|67998851|gb|EAM85550.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599378|gb|ABD44847.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 506

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/509 (46%), Positives = 336/509 (66%), Gaps = 10/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +YI+T I Y N  PHIGH Y  +I+D++ARF RLDG  V F TGTDEHGQKI KAAQ   
Sbjct: 4   IYITTPIYYVNDVPHIGHVYTTLISDIIARFMRLDGHSVKFITGTDEHGQKIEKAAQERN 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++   F D  S  FR +ADV++ SYDDFIRTTE RH  T   LW+++ D G IY G YSG
Sbjct: 64  MSLLDFTDNTSAVFRQLADVMNYSYDDFIRTTETRHKKTVVALWQRLCDNGAIYLGSYSG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDE +Y + E+    DG+        V+W+EE  YFFRLS +Q++LL++YE +P+F
Sbjct: 124 WYSVRDETFYQEKEL---VDGKAPTGAD--VEWIEEPSYFFRLSNFQERLLAFYEENPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           ++P  R NEVISFVKSGLKDLS+SR+   WGIK+P+D ++++YVW+DAL NYLT  G+ D
Sbjct: 179 VIPKYRYNEVISFVKSGLKDLSVSRQNVLWGIKVPNDDKHVIYVWVDALANYLTVLGFPD 238

Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   +W +D    L V+GKDILRFHA+YWPA L++A LPLPKK+ +HG+  ++G+K
Sbjct: 239 ENHKDYQAYWASDSSSVLQVVGKDILRFHAVYWPAILMAAELPLPKKILAHGWWTNEGQK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGNVI P +++EE GVD LRYFL++E+  G DG + ++ L   +N DLAN IGNLV
Sbjct: 299 ISKSLGNVIKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRNSLINCINYDLANNIGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+VS++ K+  G++PT        E +L     +L+++R+ +    ++  +  +  L S
Sbjct: 359 QRTVSLLYKECGGIVPTVSGNLLQGEEVLPDYQEILEKVRDCVMRCNLNEMIHIIEQLSS 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + Y  ++ PW L K++P     VLY  +E I+ + +LLQ  +PKL++KI D + + + 
Sbjct: 419 AANEYIASRAPWRLSKSDPKIMEAVLYKLLEYIKCIGLLLQPVMPKLSSKILDQIGLPEC 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           NR F      +    +L K  +PIF + L
Sbjct: 479 NRDFSRFSIPINMNTVLPKP-EPIFAKIL 506


>gi|91763268|ref|ZP_01265232.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717681|gb|EAS84332.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 513

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/472 (47%), Positives = 331/472 (70%), Gaps = 4/472 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+A+PH+GHAY  I+AD  ARF R+DG +V F TGTDEHG KI +AA+   +
Sbjct: 6   YITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAAERKKI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F D+ S+ FRD++  L++S  DFIRTTE+RH  T + LW ++    DIY   YSGW
Sbjct: 66  DPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKYSGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+ DEAYY+D+E+ +  + +   +  + V+W+EEE YFFRLS +QD+LL YYE +P+FI
Sbjct: 126 YSVSDEAYYSDEEIIEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEKNPDFI 185

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  R+NEVISFVK GLKDLS+SRK F WGIK+P+   +++YVW+DALTNY++   Y D 
Sbjct: 186 SPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYISALNYPDT 245

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            D    KFWPA +H+IGKDILRFH++YWPAFL++A +PLPKKV+ HG+IL   EK+SKS 
Sbjct: 246 NDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEKMSKSK 305

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN++DP+++IE  G+D LRY+L++E++ G DG   +D L+  +N+DLAN  GNL  R  +
Sbjct: 306 GNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLCQRVTA 365

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
              K+   ++P    F + D  +L+  +  L  IR  + NQ I+  +  ++S + E ++Y
Sbjct: 366 FAEKNCSSLVPDNIKFNDEDLVMLNKFTDNLDIIRTEIDNQNINYYINFIVSSLFEANKY 425

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP---KLANKIFDI 476
           F+ Q+PW+ KK + +R +T++Y ++E+IR+++ +L   +P   + A KIFD+
Sbjct: 426 FNDQEPWK-KKDDKNRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIFDL 476


>gi|299471948|emb|CBN79628.1| Methionyl-tRNA synthetase [Ectocarpus siliculosus]
          Length = 613

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 241/539 (44%), Positives = 341/539 (63%), Gaps = 37/539 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE    Y++T I Y N +PHIGHAY  +  DV+ARF RLDG +V+F TGTDEHGQK+  +
Sbjct: 71  KEMPPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEAS 130

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A  + + F D+ S+ FRD+   ++ S D FIRTT+  H      LW ++ ++G I  
Sbjct: 131 ALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISL 190

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE-GYFFRLSAYQDKLLSYY 180
           G Y+GWYS+RDEA+Y + E+    DG+  +     V+W+E+E  YFF+LS +Q  LL +Y
Sbjct: 191 GVYAGWYSVRDEAFYGEAEL---VDGKAPSGAE--VEWVEKEPSYFFKLSEWQQPLLDFY 245

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P+FI P  RRNE +SFV  GL+DLS+SR +F WG+ +P D +++MYVW+DAL NY++
Sbjct: 246 AENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYIS 305

Query: 241 TTGYLDNPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             G+ +  + G  +KFWPADLHVIGKDILRFH++YWPA LL+A L  PK++F HG+    
Sbjct: 306 ALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKD 365

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+KISKS GNVIDP++++   GVDA RYFL+ E+  G DG + +   + RVN++LAN +G
Sbjct: 366 GQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVG 425

Query: 360 NLVSRSVSMILKDYDGMIPTPGA---------------------FTESDESILSVCSRVL 398
           NL  R++SM +K+  G +P P A                      T  D+ +L      L
Sbjct: 426 NLAMRTLSMAVKNCGGQVPRPAAAADAGDVDEGGDKALGREDFDLTPEDKELLKSAGECL 485

Query: 399 QEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             +R  + + Q +H+AL  ++ +  + +RY D Q PW+LKKT+PDR  TVL+V +E IR 
Sbjct: 486 GVVRPLVGETQQLHKALEAILLVSRDANRYVDFQAPWKLKKTDPDRMKTVLWVLLETIRH 545

Query: 458 LAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQ------RLKPGFMLHKTFDPIFPR 509
           + IL Q FVP+ A K+ D L V + + R F +LDQ       L+PG  L K   P+FPR
Sbjct: 546 VGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQGGGGRFSLQPGVPLDKPV-PVFPR 603


>gi|189183674|ref|YP_001937459.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189180445|dbj|BAG40225.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 511

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/512 (45%), Positives = 340/512 (66%), Gaps = 11/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+T I Y N  PHIGHAY  I+ADV ARF RL G +V+F TGTDEHGQK+ KAA 
Sbjct: 2   KSKYYITTPIYYVNDIPHIGHAYTSILADVYARFMRLLGKEVIFLTGTDEHGQKVEKAAS 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           NAGV+ K FVD+ + +F  ++  L++S DDFIRTT+ +H    + LWK +  +GDIY G 
Sbjct: 62  NAGVSPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTKHIKAVQKLWKVLEQQGDIYLGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY+++DEA+Y++ E+    DG+        V+W+EE  YFF LS +Q KLL +YE++
Sbjct: 122 YCGWYAIKDEAFYSESEL--TTDGKAPTGAE--VEWVEESSYFFALSKWQQKLLDWYENN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            + I P   RNEVI+F+K+GL DLS+SR TF WGI +P+D  +++YVW+DAL NY++  G
Sbjct: 178 HDIIKPAFFRNEVINFIKNGLIDLSISRTTFKWGIAVPNDSSHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +       FWPADLH++GKDILRFHA+YWPAFL+SA LPLPK +  HG+  ++G+KI
Sbjct: 238 YASDNGTLMTNFWPADLHIVGKDILRFHAVYWPAFLMSAGLPLPKAILVHGWWTNEGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVI+P+E+  + G+D +RYFL+REI  G DG ++K     R+N++L N +GNLV 
Sbjct: 298 SKSVGNVINPVELTSKFGIDQVRYFLLREITIGNDGNFNKISFINRINSELCNKLGNLVH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           R++S I K     IP     T ++    ES+L     +   +   + N+ +   L +++ 
Sbjct: 358 RTLSFIYKYNKAKIPQLDGITITNLYKSESLLLKIVMLSDNLANIIDNENVTVILNRIME 417

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V++ + YFD Q PW+ K +N  + +T+LY  +E IR +AILLQ F+P+ AN I D++ +
Sbjct: 418 IVNQANIYFDQQAPWKFKDSNSQKIATILYTLIETIRCIAILLQPFIPESANTILDLIAI 477

Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
               R F  +++   +KPG  + +   PIF +
Sbjct: 478 DKTERMFSCINRSHAIKPGKTILEP-KPIFVK 508


>gi|148285047|ref|YP_001249137.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|146740486|emb|CAM81042.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 511

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/512 (45%), Positives = 337/512 (65%), Gaps = 11/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+T I Y N  PHIGHAY  I+ADV ARF RL G +V+F TGTDEHGQK+ KAA 
Sbjct: 2   KSKYYITTPIYYVNDIPHIGHAYTSILADVYARFMRLLGKEVIFLTGTDEHGQKVEKAAS 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           NAGV+ K FVD+ + +F  ++  L++S DDFIRTT+ RH    + LW  +  +GDIY G 
Sbjct: 62  NAGVSPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTRHIKAVQKLWNILKQQGDIYLGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY+++DEA+Y++ E+    DG+        V+W+EE  YFF LS +Q KLL +YE++
Sbjct: 122 YCGWYAIKDEAFYSESEL--TTDGKAPTGAE--VEWVEESSYFFALSKWQQKLLDWYENN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            + I P   RNEVI+F+K+GL DLS+SR TF WGI +P+D  +++YVW+DAL NY++  G
Sbjct: 178 HDIIKPAFFRNEVINFIKNGLIDLSISRTTFKWGIAVPNDSSHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +       FWPADLH++GKDILRFHA+YWPAFL+SA LPLPK +  HG+  ++G+KI
Sbjct: 238 YASDNGTLMTNFWPADLHIVGKDILRFHAVYWPAFLMSAGLPLPKAILVHGWWTNEGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVI+P+E+  + G+D +RYFL+REI  G DG + K     R+N++L N +GNLV 
Sbjct: 298 SKSVGNVINPVELTSKFGIDQVRYFLLREITIGNDGNFSKISFINRINSELCNKLGNLVH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           R++S I K     IP     T ++    ES+L     +   +   + N+ +   L +++ 
Sbjct: 358 RTLSFIYKYNKAKIPQLDGITITNLYKSESLLLKIVMLSDNLANIIDNENVTVILNRIME 417

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V++ + YFD Q PW+ K +N  + +T+LY  +E IR +AILLQ F+P+ AN I D++ +
Sbjct: 418 IVNQANIYFDQQTPWKFKDSNSQKIATILYTLIETIRCIAILLQPFIPESANTILDLIAI 477

Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
               R F  ++    +KPG  + +   PIF +
Sbjct: 478 EKTERTFSCINSSYAIKPGKTILEP-KPIFVK 508


>gi|256751388|ref|ZP_05492267.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749770|gb|EEU62795.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 632

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/508 (45%), Positives = 338/508 (66%), Gaps = 6/508 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +    PV+ ++EEGYFFRLS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFRLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNETLINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  +  +R  TVLY   E +R +A+L+  F+P    KIF+ L V +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               ++SL   L       K  + IFPR
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPR 505


>gi|73667420|ref|YP_303436.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|72394561|gb|AAZ68838.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 506

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/513 (46%), Positives = 338/513 (65%), Gaps = 18/513 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +YI+T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQK+ KAAQ   
Sbjct: 4   IYITTPIYYVNDVPHIGHVYTTLISDIIARFMRLDGYNVKFVTGTDEHGQKVEKAAQERN 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++   F +  S  FR +ADV++ SY+DF+RTTE RH      LW  + D   +Y G YSG
Sbjct: 64  ISLLEFTNGTSAVFRQLADVMNYSYNDFVRTTEMRHKKAVTALWTSLCDNDMVYLGSYSG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEA+Y + E+    DG+        V+W+EE  YFFRLS +Q+KLL++YE HP+F
Sbjct: 124 WYSVRDEAFYQEKEL---IDGKAPTGAE--VEWIEEPSYFFRLSDFQEKLLTFYEEHPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I+P  R NEVISFVKSGLKDLS+SRK   WGIK+P+D ++++YVW+DAL NYLT  G+ D
Sbjct: 179 IIPKYRYNEVISFVKSGLKDLSVSRKNVVWGIKVPNDDEHVIYVWVDALANYLTVLGFPD 238

Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   +W  D    LHV+GKDILRFHA+YWPA L++A LPLPKK+ +HG+  ++G+K
Sbjct: 239 VKSKDYQTYWGNDNSTVLHVVGKDILRFHAVYWPAILMAAGLPLPKKILAHGWWTNEGQK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGN+I P +++EE GVD LRYFL++E+  G DG + +    K +N+DLAN IGNLV
Sbjct: 299 ISKSLGNIIKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRSSFIKCINSDLANNIGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ----NQLIHRALAQVI 418
            R+VS++ K+ +G +P        +E +L     +L++ R  ++    N LIH  + Q+ 
Sbjct: 359 QRTVSLLYKECEGKVPLVNNSLLRNEEVLPDYQEILEKARGCIKYYNLNGLIH-IIEQLS 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           S+ +E   Y  A+ PW+L K++ +    VLY  +E IR + +LLQ  +P+L++K+ D + 
Sbjct: 418 SMANE---YITARVPWKLSKSDREIMKAVLYKLLEYIRCIGLLLQPVIPELSSKMLDQIN 474

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +   NR F      +  G +L K  +PIF + +
Sbjct: 475 LPRCNRDFSKFSIPISMGEILPKP-EPIFAKIV 506


>gi|167038518|ref|YP_001666096.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116914|ref|YP_004187073.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166857352|gb|ABY95760.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319930005|gb|ADV80690.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 633

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/508 (45%), Positives = 337/508 (66%), Gaps = 6/508 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +     V+ ++EEGYFFRLS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGRQ-VERVKEEGYFFRLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  +  +R  TVLY   E +R +AIL+  F+P    KIF+ L + +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLAEALRFIAILISPFMPNTPKKIFEQLGIEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               ++SL   L       K  + IFPR
Sbjct: 478 NLTTWESLKFSLLKVGTRVKRGEIIFPR 505


>gi|42520232|ref|NP_966147.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42409970|gb|AAS14081.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 545

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/544 (45%), Positives = 340/544 (62%), Gaps = 41/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D+ S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+    DG+        VQW++EE YFFRLS +Q+KLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQEKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNGKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266
           + G+         +FW                                    ++HVIGKD
Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSAANLADNSFNVHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQSLLK 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E  L  C  +L ++  ++     +  +  +I++ SE + Y D   PW L KT+ +R + 
Sbjct: 416 GEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRERMNL 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505
           V+Y  +E IR + ILLQ  VPK A  I + L +  E R  +SL D  +  G  L K   P
Sbjct: 476 VIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQRDLKSLCDACVSSGITLPKP-TP 534

Query: 506 IFPR 509
           +F R
Sbjct: 535 VFLR 538


>gi|167038739|ref|YP_001661724.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913676|ref|ZP_07130993.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723309|ref|YP_003903060.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166852979|gb|ABY91388.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890361|gb|EFK85506.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580370|gb|ADN53769.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 632

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/509 (44%), Positives = 336/509 (66%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +     V+ ++EEGYFFRLS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGRQ-VERVKEEGYFFRLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K + G++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  +  +R  TVLY   E +R +A+L+  F+P    KIF+ L V +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|225677328|ref|ZP_03788304.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590629|gb|EEH11880.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 541

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/544 (45%), Positives = 343/544 (63%), Gaps = 41/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D+ S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+    DG+        VQW++EE YFFRLS +QDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQDKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFW-------PA---------------------------DLHVIGKD 266
           + G+         +FW       PA                           ++HVIGKD
Sbjct: 236 SIGFPSTEGEEYKRFWAESKTQIPASRAGMTPNQGKTQIPVLRAANLADSSFNVHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDRDLLR 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E  L  C  +L ++ +++     ++ +  +I++ SE + Y D   PW L KT+ +R + 
Sbjct: 416 GEESLPNCKAILGQVMDHLSKYEFNQIILLIINISSEANAYIDKSAPWTLSKTDRERMNL 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505
           V+Y  +E IR +  LLQ  VPK A  I + L +  E R  +SL D  +  G  L K   P
Sbjct: 476 VIYKLLEYIRIIGTLLQPIVPKSAEMILNQLQIPKEQRDLKSLYDTCVSSGITLPKP-TP 534

Query: 506 IFPR 509
           +F R
Sbjct: 535 VFLR 538


>gi|323706295|ref|ZP_08117861.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534347|gb|EGB24132.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 635

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/506 (45%), Positives = 335/506 (66%), Gaps = 6/506 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+  G
Sbjct: 5   FYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRKAKEKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K +VD+     +D+ + +DIS D FIRTT+K+H +  + ++ K+ +KGDIYK  Y G
Sbjct: 65  VTPKQYVDEIVAWIKDLWNTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++    DG   +    PV+ ++EE YFF+LS Y DKLL YYE HP+F
Sbjct: 125 WYCTPCETFWTEKQL---VDGNCPDCGR-PVELVKEESYFFKLSNYADKLLKYYEEHPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R NE++SF+KSGL+DL +SR +FDWG+K+P DP++++YVWIDAL+NY+T  GY  
Sbjct: 181 IQPESRLNEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGYST 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+SKS
Sbjct: 241 DHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKS 300

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN  GNL+SR+V
Sbjct: 301 KGNVVDPKELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTV 360

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K +DG++P      + D+ ++S+ + + + +   M       ALA++  LV   ++
Sbjct: 361 TMVEKYFDGVVPEVSDKDDVDDELISIANNLPKVVESYMDKLQFSNALAEIWKLVGRANK 420

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K  +   R  TVLY  VE +R +AIL+  F+P    KI++ L + D+ R
Sbjct: 421 YIDETMPWVLAKDESKKGRLKTVLYNLVESLRFVAILITPFMPNTPIKIYEQLGIDDDLR 480

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + SL   L       K  + IFPR 
Sbjct: 481 TWDSLKFGLLKSGTKVKRGENIFPRI 506


>gi|311028969|ref|ZP_07707059.1| methionyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 663

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/523 (43%), Positives = 344/523 (65%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +++  YI+T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI +
Sbjct: 2   VADKKTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLKGFDVMYLTGTDEHGQKIQR 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT++ +VD      +D+ + LDISYDDFIRTTE RH +    ++K++ D+GDIY
Sbjct: 62  KAEEKGVTSQQYVDDIVSGIKDLWEKLDISYDDFIRTTESRHKEVVEKIFKQLLDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE YY + ++        K   G+  ++ H PV+ + E+ YFFR+  Y 
Sbjct: 122 LDEYEGWYSVPDETYYREHQLVDPIHENGKVVGGKSPDSGH-PVELVREQSYFFRMGKYV 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL YY+ +PEFI P  R+NE+++ F+K GL+DL++SR +FDWG+K+P DP++++YVWI
Sbjct: 181 DRLLQYYDENPEFIQPESRKNEMVNNFIKPGLEDLAVSRTSFDWGVKVPGDPKHVIYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGTDNDEKYMKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +RVN 
Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVNF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K +DG +P   G  TE D+++  +    +Q     M+N    
Sbjct: 361 DLANDLGNLLNRTVAMIDKYFDGEVPVYNGNVTEFDQTLSDLAVNTVQHYENAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ +  LVS  ++Y D  +PW L K +   D+ ++ +    E +R + ILL+ F+ + 
Sbjct: 421 VALSSIWQLVSRTNKYIDETQPWVLAKNDETKDQLASAMAHLAESLRFIGILLKPFLTRT 480

Query: 470 ANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             KIF  L V +    ++SL    ++  G    K  DPIFPR 
Sbjct: 481 PGKIFAQLGVKESLTTWESLSSFGQISAGTKTVKA-DPIFPRL 522


>gi|297543649|ref|YP_003675951.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841424|gb|ADH59940.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 632

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 228/509 (44%), Positives = 336/509 (66%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +    PV+ ++EEGYFF+LS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFKLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDNDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K + G++P      E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFGGILPKLSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  +  +R  TVLY   E +R +A+L+  F+P    KIF+ L V +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|58698674|ref|ZP_00373565.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630227|ref|YP_002727018.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|58534805|gb|EAL58913.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592208|gb|ACN95227.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 548

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/547 (44%), Positives = 339/547 (61%), Gaps = 44/547 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D  S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDDVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+    DG+        VQW++EE YFFRLS +QDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQDKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA-------------------------------------DLHVI 263
           + G+         +FW                                       ++HVI
Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSTGMTPNLADNSFNVHVI 295

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD
Sbjct: 296 GKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRYFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT    
Sbjct: 356 QLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQI 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
               E  L  C  +L ++  ++     +  +  +I++ SE + Y D   PW L KT+ +R
Sbjct: 416 LLKGEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRER 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKT 502
            + V+Y  +E IR + ILLQ  VPK A  I + L +  E R  +SL +  +  G  L K 
Sbjct: 476 VNLVIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQRDLKSLCNACVSLGITLPKP 535

Query: 503 FDPIFPR 509
             P+F R
Sbjct: 536 -TPVFLR 541


>gi|58617532|ref|YP_196731.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58417144|emb|CAI28257.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 506

 Score =  468 bits (1205), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/510 (45%), Positives = 329/510 (64%), Gaps = 10/510 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            +Y++T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQKI KAA  A
Sbjct: 3   NIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             +   F D  S  F+ +  V++ S+DDFIRTTE RH      LW+++   G IY G YS
Sbjct: 63  NKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNYS 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDE +Y + E+    DG+        V+W+EE  YFFRLS +Q++LL +Y+ HP 
Sbjct: 123 GWYAVRDETFYQEKEL---IDGKAPTGAE--VEWVEEPSYFFRLSHFQERLLDFYDKHPN 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI+P  R NEVISFVKSGLKD+S+SR+   WGI +P+D  +I+YVWIDALTNYLTT G+ 
Sbjct: 178 FIIPRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFP 237

Query: 246 DNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +        +W  +    +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+  ++G+
Sbjct: 238 EINSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQ 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           KISKSLGNVI+P E+IEE GVD +RYFL++E+  G DG Y ++ +   +N DLAN IGNL
Sbjct: 298 KISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+VS++ K+  G IP   +    DE  L     +L+ +R  +    ++  +  V  L 
Sbjct: 358 VQRTVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGVIHIVEELS 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           S  + Y   + PW+L KT+P     VLY  +E IR + +LLQ  +P L++KI D + +++
Sbjct: 418 SMANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             R F +    +  G +L K  +PIF + +
Sbjct: 478 YKRSFNNFAVPIDTGIILPKP-EPIFTKII 506


>gi|172056076|ref|YP_001812536.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171988597|gb|ACB59519.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 651

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/509 (43%), Positives = 348/509 (68%), Gaps = 11/509 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSAKLHIGHAYTTVAGDAMARYKRLQGFDVRYLTGTDEHGQKIQEKAKEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ + FVD      + + D LDISYDD+IRTTE RH +    +++ + +KGDIY G Y G
Sbjct: 65  VSEQEFVDGVVEQIKVLWDRLDISYDDYIRTTEPRHKEVVERVFETLLEKGDIYLGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+ DE YY + ++    DG+  ++ H PV+ + EE YFFR+S Y D+L+ YYE++P F
Sbjct: 125 WYSVPDETYYTESQL---VDGKSPDSGH-PVELVREECYFFRISQYADRLVEYYEANPSF 180

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           ILP  R++E+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVW+DALTNY+++ GY 
Sbjct: 181 ILPESRKHEMINNFIKPGLQDLAVSRTTFDWGVKVPSNPKHVVYVWVDALTNYISSLGYG 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +  G+  K+WPAD+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG++L K  K+SK
Sbjct: 241 TDDQGNFDKYWPADVHLVGKEIVRFHTIVWPALLMALDLPLPKQVFAHGWLLMKDGKMSK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +R+N DLAN +GNL++R+
Sbjct: 301 SKGNVVDPVPMIDRYGLDALRYYLLREVPFGSDGMFTPEAFVERMNFDLANDLGNLLNRT 360

Query: 366 VSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++MI K +DG+IPT  G  T  DE++ ++    ++++   M++     AL+ +  L+S  
Sbjct: 361 IAMITKYFDGVIPTYAGNVTPFDETLSTLAKETVEKVEAAMEHMEFSVALSHIWQLISRA 420

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L K  +  D  ++ +   V  +R +AI+LQ F+ +   ++F  L +  +
Sbjct: 421 NKYIDETQPWVLAKDESKTDELASSMVHLVGALRHVAIMLQPFMTRSPKEMFRQLGLEGQ 480

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509
              + +L+Q   ++ G  +    +PIFPR
Sbjct: 481 PMDWTALEQFAAIEEGTKVGAA-EPIFPR 508


>gi|289577361|ref|YP_003475988.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527074|gb|ADD01426.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 633

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/508 (44%), Positives = 335/508 (65%), Gaps = 6/508 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +++  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKNLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +    PV+ ++EEGYFF+LS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFKLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTYHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN  GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDFGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K + G++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFGGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  +  +R  TVLY   E +R +A+L+  F+P    KIF+ L + +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLAEALRFIAVLISPFMPNTPKKIFEQLGIEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               ++SL   L       K  + IFPR
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPR 505


>gi|217966690|ref|YP_002352196.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217335789|gb|ACK41582.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 634

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 225/471 (47%), Positives = 314/471 (66%), Gaps = 5/471 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI+T I Y N++PHIG  Y  I+AD  ARF+RL   DV F TG DEHGQK+A+ AQ
Sbjct: 9   RNKFYITTPIYYSNSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQ 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + +VD  ++ F +  + + I+ DDFIRTTEKRH +  + +++K+ DKG +YKG 
Sbjct: 69  ERGYTPQEYVDLMAQKFIETWEKIGITNDDFIRTTEKRHEEVVQKVFQKLYDKGYLYKGS 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWY    E ++  +E++ G       A   PV+W+EEE Y+F+LSA+ + LL Y E H
Sbjct: 129 YAGWYCTPCETFWQKEELHDGN----CPACGRPVEWLEEETYYFKLSAFAEPLLKYIEEH 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RRNEVISF+KSGLKD+S +R T  WGI +P DP++ +YVW DAL NY++  G
Sbjct: 185 PEFVYPETRRNEVISFIKSGLKDISATRTTVKWGIPVPFDPKHTVYVWFDALVNYISALG 244

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL + D    ++WPAD+H+IGKDILRFHAI WPA L++ N+PLPK V +HGF   KG KI
Sbjct: 245 YLTDDDSKFKRYWPADVHLIGKDILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGGKI 304

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP E+I   GVDALRYFL+RE+  G DG Y  +   +R ++DLAN +GNL++
Sbjct: 305 SKSKGNRVDPHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLLN 364

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +++  K  +G +P P  F E D+ +L     +  ++ E M N     AL  +  +V E
Sbjct: 365 RVLTVAEKYTEGKVPEPKEFQEEDKFLLQKGDDMANKVEEAMANFNPANALTYIWEVVQE 424

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +RY D Q PW L  + N DR +TV+Y  +E +R+++I+L AF+P +A +I
Sbjct: 425 ANRYIDQQAPWNLASSGNKDRLNTVIYTLLEALRKISIMLYAFMPNIAEEI 475


>gi|217965737|ref|YP_002351415.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217335007|gb|ACK40801.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569716|emb|CAR82895.1| metS [Listeria monocytogenes L99]
          Length = 665

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/522 (44%), Positives = 346/522 (66%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M++     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|57239498|ref|YP_180634.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161577|emb|CAH58505.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 506

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/509 (45%), Positives = 330/509 (64%), Gaps = 10/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +Y++T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQKI KAA  A 
Sbjct: 4   IYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKAN 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            +   F D  S  F+ +A V++ S+DDFIRTTE RH      LW+++ + G IY G Y+G
Sbjct: 64  KSLVEFTDHASAIFQHLAGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNYAG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY++RDE +Y + E+    DG+        V+W+EE  YFFRLS +Q++LL +Y+ HP F
Sbjct: 124 WYAVRDETFYQEKEL---IDGKAPTGAE--VEWVEEPSYFFRLSHFQERLLDFYDKHPNF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I+P  R NEVISFVKSGLKD+S+SR+   WGI +P+D  +I+YVWIDALTNYLTT G+ +
Sbjct: 179 IIPKHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPE 238

Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   +W  +    +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+  ++G+K
Sbjct: 239 INSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGNVI+P E+IEE GVD +RYFL++E+  G DG Y +  +   +N DLAN IGNLV
Sbjct: 299 ISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRSSIINCINCDLANNIGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+VS++ K+  G IP   +    DE  L     +L+ +R  +    ++  +  V  L S
Sbjct: 359 QRTVSLLHKECRGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGMIHIVEELSS 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + Y   + PW+L KT+P     VLY  +E IR + +LLQ  +P L++KI D + +++ 
Sbjct: 419 IANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEY 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F +    +  G +L K  +PIF + +
Sbjct: 479 KRSFNNFAVPIDTGIILPKP-EPIFTKII 506


>gi|312109184|ref|YP_003987500.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311214285|gb|ADP72889.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 648

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/515 (45%), Positives = 345/515 (66%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT+ RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFF++S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFKMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T 
Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 238 LGYGTDDDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IPT  GA T  D  ++      +++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPTYRGAKTPFDNDLVETAKETVKQYEEAMEKMEFSVALATVWQL 417

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D  +PW L K  +  ++ ++V+    E +R +AILLQ F+ +  +KIF  L 
Sbjct: 418 INRTNKYIDETQPWVLAKEESQKEQLASVMTHLAESLRHVAILLQPFLTRTPDKIFAQLG 477

Query: 479 VADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           + DE+ + + SL +   +K G  + K  DP+FPR 
Sbjct: 478 IVDESLKQWDSLYEFGLIKEGTKVAKG-DPLFPRL 511


>gi|58584456|ref|YP_198029.1| methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418772|gb|AAW70787.1| Methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 540

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/544 (45%), Positives = 341/544 (62%), Gaps = 41/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T I Y N +PHIGHAY  +I DV ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPIYYVNDKPHIGHAYTSLICDVTARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  K F D+ S +FR +A+ +D  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKTKGMHPKEFTDKVSVSFRKLAEFIDFQYDDFIRTTEERHEKAVVALWDRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+ DEA+Y + E+    DG+        V+W++EE YFFRLS++Q+KLL  Y
Sbjct: 121 LDSYSGWYSVSDEAFYQESEL---IDGKAPTGAE--VEWVKEESYFFRLSSWQNKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  R+NEVISFVKSGL DLS+SR +F+WGIK+P + ++I+YVW+DALTNYLT
Sbjct: 176 KNQPNFIFPESRKNEVISFVKSGLTDLSISRISFNWGIKVPRNDKHIIYVWVDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266
           + G+ +  +    KFW                                    ++HVIGKD
Sbjct: 236 SIGFPNTENEEYKKFWAESQSVIQVADTWIQKEIQISASRARMTSNLADNSFNIHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++G+KISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIVVHGWWLNEGKKISKSLGNVIDPIALAKEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKRCFGVVPTVDKSLLK 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E  L     +  ++ +++     +  +  +I++ SE + Y D   PW L KT+ +R + 
Sbjct: 416 GEEGLPNYRAIFNQVMDHLSKYEFNHIILLIINISSEANAYIDKSAPWILSKTDRERMNL 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505
           V+Y  +E IR + ILLQ  VP+ A  I D L +  E R  +SL    +  G  LHK   P
Sbjct: 476 VIYKLLEYIRIIGILLQPIVPRPAEVILDQLQIPKEQRDLKSLCGAYVSSGTTLHKP-TP 534

Query: 506 IFPR 509
           +F R
Sbjct: 535 VFLR 538


>gi|290892267|ref|ZP_06555262.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290558093|gb|EFD91612.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 664

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/522 (44%), Positives = 346/522 (66%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M++     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|307265681|ref|ZP_07547234.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389218|ref|ZP_08210786.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919325|gb|EFN49546.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994581|gb|EGD53005.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 633

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/509 (44%), Positives = 336/509 (66%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+   +DIS D FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKTMDISNDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +    PV+ ++EEGYFF+LS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQL---VDGKCPDCGR-PVERVKEEGYFFKLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPRHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVRKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K ++G++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFEGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  +  +R  TVLY   E +R +AIL+  F+P    K+F+ L +  
Sbjct: 418 ANKYIDETMPWILAKDESKKERLGTVLYNLAEALRFIAILISPFMPNTPQKMFEQLGIEK 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   ++SL   L       K  + IFPR 
Sbjct: 478 DLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|255022653|ref|ZP_05294639.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 619

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/522 (44%), Positives = 346/522 (66%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +E+YK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEIYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M++     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|295401997|ref|ZP_06811959.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294975999|gb|EFG51615.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 648

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/515 (44%), Positives = 345/515 (66%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT+ RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFF++S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFKMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T 
Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 238 LGYGTDDDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IPT  GA T  D  ++      +++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPTYRGAKTPFDNDLVETAKETVKQYEEAMEKMEFSVALATVWQL 417

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D  +PW L K  +  ++ ++V+    E +R +AILLQ F+ +  +KIF  L 
Sbjct: 418 INRTNKYIDETQPWVLAKEESQKEQLASVMTHLAESLRHVAILLQPFLTRTPDKIFAQLG 477

Query: 479 VADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           + DE+ + + SL +   +K G  + K  +P+FPR 
Sbjct: 478 IVDESLKQWDSLYEFGLIKEGTKVAKG-EPLFPRL 511


>gi|239825617|ref|YP_002948241.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805910|gb|ACS22975.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 648

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/515 (45%), Positives = 344/515 (66%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVEGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T 
Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K +DGMIP   GA T  D  ++      +++  E M+      ALA V  L
Sbjct: 358 LNRTVAMIEKYFDGMIPPYRGAKTAFDNDLVEKAKETVKQYEEAMEKMEFSIALASVWQL 417

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D  +PW L K     ++ ++V+    E +R +AILLQ F+ +   KIF  L 
Sbjct: 418 INRTNKYIDETQPWLLAKDEGKKEQLASVMTHLAESLRHVAILLQPFLTRTPEKIFAQLG 477

Query: 479 VADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           + DE  + + SL +   +K G  + K  +P+FPR 
Sbjct: 478 IVDEQLKQWDSLYEFGLIKEGTKVTKG-EPLFPRL 511


>gi|58579479|ref|YP_197691.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418105|emb|CAI27309.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 506

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/509 (45%), Positives = 329/509 (64%), Gaps = 10/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +Y++T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQKI KAA  A 
Sbjct: 4   IYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKAN 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            +   F D  S  F+ +  V++ S+DDFIRTTE RH      LW+++ + G IY G Y+G
Sbjct: 64  KSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNYAG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY++RDE +Y + E+    DG+        V+W+EE  YFFRLS +Q++LL +Y+ HP F
Sbjct: 124 WYAVRDETFYQEKEL---IDGKAPTGAE--VEWVEEPSYFFRLSHFQERLLDFYDKHPNF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I+P  R NEVISFVKSGLKD+S+SR+   WGI +P+D  +I+YVWIDALTNYLTT G+ +
Sbjct: 179 IIPKHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPE 238

Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   +W  +    +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+  ++G+K
Sbjct: 239 INSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGNVI+P E+IEE GVD +RYFL++E+  G DG Y +  +   +N DLAN IGNLV
Sbjct: 299 ISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRSSIINCINCDLANNIGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+VS++ K+  G IP   +    DE  L     +L+ +R  +    ++  +  V  L S
Sbjct: 359 QRTVSLLHKECRGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGMIHIVEELSS 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + Y   + PW+L KT+P     VLY  +E IR + +LLQ  +P L++KI D + +++ 
Sbjct: 419 IANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEY 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F +    +  G +L K  +PIF + +
Sbjct: 479 KRSFNNFAVPIDTGIILPKP-EPIFTKII 506


>gi|254456247|ref|ZP_05069676.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083249|gb|EDZ60675.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 494

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/470 (46%), Positives = 323/470 (68%), Gaps = 1/470 (0%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GHAY  IIAD  ARF ++DG +V F TGTDEHG KI +AA+   + T  F DQ S+ FR
Sbjct: 1   MGHAYSSIIADFFARFKKMDGFNVYFLTGTDEHGLKIQRAAEKQNIDTLEFCDQISQTFR 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++  L+++  DFIRTTE+RH  T + LWK++     IY   YSGWYS+ DEA+YNDDE+
Sbjct: 61  NLSKTLNLTNTDFIRTTEERHKKTVQYLWKELEKNDYIYLSKYSGWYSVSDEAFYNDDEI 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               + +   +  + V+W+EEE YFFRLS ++  LL YY+SHP+FI P  RRNEVISFVK
Sbjct: 121 ETIDENKVAISSKSKVEWIEEESYFFRLSKWEKPLLDYYKSHPDFIAPESRRNEVISFVK 180

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           SGLKDLS+SRK+F WGIK+P++  +++YVW+DALTNYL+   + +  D     FWPA +H
Sbjct: 181 SGLKDLSVSRKSFSWGIKVPNNNDHVIYVWLDALTNYLSALNFPNANDELFKNFWPASIH 240

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +IGKDILRFHA+YWPAFLL+A + LP KV+ HG+IL   EK+SKS GN++DP+E+I+E G
Sbjct: 241 LIGKDILRFHAVYWPAFLLAAKIELPTKVYGHGWILSDNEKMSKSKGNILDPLEIIKEYG 300

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           +D LRY+L++E++ G DG   ++ L+  +N+DLAN  GNL  R  +  +K+ +  IP   
Sbjct: 301 LDPLRYYLIKEVSFGNDGNISQERLEDCINSDLANNFGNLCQRVTAFAIKNCESKIPKQI 360

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            F + D  IL+     L+ IRE + NQ I+  +  +I+ + E ++YF+ Q+PW+ KK + 
Sbjct: 361 DFQKEDLEILNKYMNNLENIREKIDNQDINFYIDYIINSLFEANKYFNDQEPWK-KKDDQ 419

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            R +T++Y T+E++R+++ LL   +P  + K   I  + +++  F S++ 
Sbjct: 420 LRLNTIVYTTLEIVRKISFLLFPIIPNSSLKALKIFNLTEKDINFSSIEN 469


>gi|228989246|ref|ZP_04149239.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228770456|gb|EEM19027.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 660

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/524 (44%), Positives = 345/524 (65%), Gaps = 18/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H  V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D
Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L++I E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQGTLKKIEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    E++RQ+AI+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMAIMLMPFLTATP 481

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
           +KIF  L + DE   +QS D     G +   T      PIFPR 
Sbjct: 482 SKIFTQLGLTDE--AYQSWDSLSTIGCIPASTKVVKGQPIFPRL 523


>gi|116871573|ref|YP_848354.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740451|emb|CAK19571.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 665

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 345/522 (66%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++  +GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLAQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +IE  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIERYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  T+ D++++   + V++E  ++M++     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTDFDQTLVDFKNNVVEEYEKSMEHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWTLAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|152973886|ref|YP_001373403.1| methionyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022638|gb|ABS20408.1| methionyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 659

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/524 (43%), Positives = 342/524 (65%), Gaps = 18/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EEKKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +D+ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTPQAYVDDIVAGIKDLWNKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y + ++        K   G+  ++ H  V+ + E  YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMENGKVVGGKSPDSGH-AVELVREASYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D
Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY         KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENAEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG IP      TE DE++++  +  LQ++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFDGQIPAFKEKVTEFDEALVNFATDTLQKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +   +S  ++Y D  +PW L K   DR   ++V+    E++RQ +I+L  F+   +
Sbjct: 422 ALSSIWQFISRTNKYIDETQPWVLAKDEKDREKLASVMAHLAEMLRQTSIMLMPFLTTTS 481

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
            KIF+ L + DE   +QS +     G +   T      PIFPR 
Sbjct: 482 GKIFEQLGITDE--AYQSWESLSTIGCIPTGTKVVKGQPIFPRL 523


>gi|228983294|ref|ZP_04143508.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229153817|ref|ZP_04281948.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629621|gb|EEK86317.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228776408|gb|EEM24760.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 660

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/523 (43%), Positives = 348/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           NK+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 NKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|218291061|ref|ZP_03495093.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239015|gb|EED06221.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 650

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/512 (45%), Positives = 328/512 (64%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YPN + HIGHAY  + AD +AR+ RL G DV F TGTDEHG KI + A+
Sbjct: 2   KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K F+D      +D+   LDISYDDFIRTTE RH      +++++  +GDIY   
Sbjct: 62  QAGLEPKAFLDPIIAWIQDLWRKLDISYDDFIRTTELRHERVVEQIFERLLQQGDIYLSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+Y+ + E+ +G   Q        VQ++ EE YFFR+S Y D+LL YYE +
Sbjct: 122 YQGWYCTPCESYWAERELVEGKCPQC----GREVQFVREESYFFRMSKYVDRLLQYYEEN 177

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P+ R+ E+I +F++ GL+DL +SR +FDWG+ +P +P++++YVW+DAL NY++  
Sbjct: 178 PGFIEPVSRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAI 237

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GYL +    +AKF   WPAD+HV+GKDI+RFHA+YWP  L++  LPLPKKVF HGF L K
Sbjct: 238 GYLSDDPNERAKFERYWPADVHVVGKDIVRFHAVYWPIILMALGLPLPKKVFGHGFFLVK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP+ +++  G DA RYFL+REI  G+DG +  +G+ +R+N DLAN  G
Sbjct: 298 GGKMSKSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R+ +M+ +  DG++PTPG+ T+ D ++  + +    ++ ENM       ALA++ +
Sbjct: 358 NLVHRTAAMLNRFNDGVVPTPGSLTDVDRALRELAAEAKAKVEENMDQLQFSVALAELWN 417

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           LV   ++Y D  +PW+L K    DR +TVLY  VE IR  AIL+Q F+      I +   
Sbjct: 418 LVRAANKYIDDCQPWKLNKEGQRDRLATVLYHMVEAIRVSAILVQPFMTDAPRAIREQFG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             DE   + S +  L P        +P+FPR 
Sbjct: 478 WGDEAFAWDSAEMGLGPSGQKVAEREPLFPRL 509


>gi|229074100|ref|ZP_04207147.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708994|gb|EEL61120.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 660

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/522 (43%), Positives = 346/522 (66%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y      D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     LQ++ + M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKNTLQKVEDAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKGENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E ++ ++SL      PG    +  +PIFPR 
Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPGGTKVEKGNPIFPRL 523


>gi|228995429|ref|ZP_04155099.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764290|gb|EEM13167.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 660

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/524 (43%), Positives = 345/524 (65%), Gaps = 18/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT++ +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTSQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H  V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D
Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    E++RQ+ I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMGIMLMPFLTATP 481

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
           +KIF  L + DE   +QS D     G +   T      PIFPR 
Sbjct: 482 SKIFTQLGLTDE--AYQSWDSLSTIGCIPASTKVVKGQPIFPRL 523


>gi|229542295|ref|ZP_04431355.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326715|gb|EEN92390.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 655

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/516 (44%), Positives = 339/516 (65%), Gaps = 11/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R+  YI+T I YP+   HIGHAY  +  D +AR+ RL G DV+F TGTDEHGQKI + 
Sbjct: 3   EKRKTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGFDVMFLTGTDEHGQKIQRK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT + +VD+     +D+   L+IS DDFIRTT+ RH      ++KK+ D+GDIY 
Sbjct: 63  AKEKGVTPQQYVDEIVAGIQDLWKKLEISNDDFIRTTQDRHKKAVEKIFKKLLDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++    DG+  +    PV+ ++EE YFF++  Y D+LL YYE
Sbjct: 123 GEYEGWYCTPCESFFTERQL---VDGKCPDCGR-PVEKVKEESYFFKMGKYVDRLLQYYE 178

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T
Sbjct: 179 ENPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYIT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + D +  K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF+HG++L K 
Sbjct: 239 ALGYGSDDDSNYRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFAHGWLLMKD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVIDP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GN
Sbjct: 299 GKMSKSKGNVIDPVTLIDRYGLDALRYYLLREVPFGADGIFTPEGFVERINFDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R+++M+ + +DG+IPT  G+       +++     +++  + M+N     ALA +  
Sbjct: 359 LLNRTIAMMNQYFDGVIPTFAGSHNPYSIQLVTAYKEAVKKYEDAMENMQFSVALASLWE 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            VS  ++Y D   PW L K    RA  + V+    E +R +AILLQ F+     KIFD L
Sbjct: 419 FVSRTNKYIDETTPWTLAKDETKRADLAEVMVHLAESLRHIAILLQPFLTSTPKKIFDQL 478

Query: 478 FVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            + DE+   ++SL     +  G  + K   PIFPR 
Sbjct: 479 NITDESLHTWESLSLFGSIPEGTKVVKKGKPIFPRL 514


>gi|16799293|ref|NP_469561.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|25009380|sp|Q92F90|SYM_LISIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16412635|emb|CAC95449.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 664

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWALAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 524


>gi|229094760|ref|ZP_04225766.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229100827|ref|ZP_04231642.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229113713|ref|ZP_04243149.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669710|gb|EEL25116.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228682594|gb|EEL36656.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228688628|gb|EEL42500.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 660

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/522 (43%), Positives = 346/522 (66%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y      D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     LQ++ + M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLQKVEDAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E ++ ++SL      PG    +  +PIFPR 
Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPGGTKVEKGNPIFPRL 523


>gi|313621117|gb|EFR92184.1| methionyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 525


>gi|206900100|ref|YP_002251787.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739203|gb|ACI18261.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 628

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/471 (46%), Positives = 311/471 (66%), Gaps = 5/471 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI+T I Y N++PHIG  Y  I+AD  ARF+RL   DV F TG DEHGQK+A+ AQ
Sbjct: 2   RNKFYITTPIYYSNSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G   + +VD  ++ F +    + I+ DDFIRTT+KRH +  + +++K+ D+G +YKG 
Sbjct: 62  EKGYMPQEYVDMMAQKFLETWKKIGITNDDFIRTTQKRHEEVVQKVFQKLYDEGYLYKGS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWY    E ++  ++++ G       +   PV+W+EEE Y+F+LSA+ + LL Y E H
Sbjct: 122 YAGWYCTPCETFWQKEDLHDGN----CPSCGRPVEWLEEETYYFKLSAFAEPLLKYIEEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RRNEVISF+KSGLKD+S +R T  WG+ +P DP++ +YVW DAL NY++  G
Sbjct: 178 PEFVYPETRRNEVISFIKSGLKDISATRTTVKWGVPVPFDPKHTVYVWFDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL N D    ++WPAD+H+IGKDILRFHAI WPA L++ N+PLPK V +HGF   KG KI
Sbjct: 238 YLTNDDTKFKRYWPADIHLIGKDILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGGKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP E+I   GVDALRYFL+RE+  G DG Y  +   +R ++DLAN +GNLV+
Sbjct: 298 SKSKGNRVDPHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLVN 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +++  K  +G +P P  F E D  +L     V  ++ E M N     AL Q+  ++ E
Sbjct: 358 RVLTVAEKYTEGKVPEPKEFKEEDTYLLQKGEDVANKVEEAMANFNPANALTQIWEVIQE 417

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +RY D Q PW L  + + DR +TV+Y  +E +R+++I+L AF+P  A +I
Sbjct: 418 ANRYIDQQAPWNLASSGDNDRLNTVIYTLLETLRKISIMLYAFIPNTAEEI 468


>gi|304315621|ref|YP_003850766.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777123|gb|ADL67682.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 636

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/506 (44%), Positives = 331/506 (65%), Gaps = 6/506 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI++ I YP+ + HIGH+Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+  G
Sbjct: 5   FYITSPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRKAKEKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K +VD+     +D+   +DIS D FIRTT+K+H +  + ++ K+ +KGDIYK  Y G
Sbjct: 65  VTPKQYVDEIVAWIKDLWKTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++    DG   +    PV+ ++EE YFF+LS Y DKLL YYE HP+F
Sbjct: 125 WYCTPCETFWTEKQL---VDGNCPDCGR-PVELVKEESYFFKLSNYADKLLKYYEEHPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R NE++SF+KSGL+DL +SR +FDWG+K+P DP++++YVWIDAL+NY+T  GY  
Sbjct: 181 IQPESRLNEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGYST 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++  G K+SKS
Sbjct: 241 DHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILDGGKMSKS 300

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN  GNL+SR+V
Sbjct: 301 KGNVVDPKELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTV 360

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K +DG++P        D+ ++S+ + + + +   M       ALA++  LV   ++
Sbjct: 361 TMVEKYFDGVVPEASDKDNVDDELISIANDLPKIVEGYMDRLQFSNALAEIWKLVGRANK 420

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K  +   R   VLY  VE +R +A+L+  F+P    KI++ L + D+ R
Sbjct: 421 YIDETMPWVLAKDESKKGRLKAVLYNLVESLRFVAVLITPFMPNTPIKIYEQLGIDDDLR 480

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + SL   L       K  + IFPR 
Sbjct: 481 TWASLKFGLLKAGTKVKRGENIFPRI 506


>gi|229003043|ref|ZP_04160900.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758201|gb|EEM07389.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 627

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/524 (43%), Positives = 345/524 (65%), Gaps = 18/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT++ +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTSQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H  V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWGI++P +P++++YVW+D
Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    E++RQ+ I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMGIMLMPFLTATP 481

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
           +KIF  L + DE   +QS D     G +   T      PIFPR 
Sbjct: 482 SKIFTQLGLTDE--AYQSWDSLSTIGCIPASTKVVKGQPIFPRL 523


>gi|226222806|ref|YP_002756913.1| methionyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254992034|ref|ZP_05274224.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|225875268|emb|CAS03965.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 664

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|254825910|ref|ZP_05230911.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853705|ref|ZP_05243053.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255519716|ref|ZP_05386953.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764921|ref|ZP_07074910.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258607084|gb|EEW19692.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293595148|gb|EFG02909.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514408|gb|EFK41466.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 664

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|46906409|ref|YP_012798.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|67461803|sp|Q724N6|SYM_LISMF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46879673|gb|AAT02975.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 665

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|254933016|ref|ZP_05266375.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293584575|gb|EFF96607.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328469714|gb|EGF40636.1| methionyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 664

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|313625533|gb|EFR95248.1| methionyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 655

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 525


>gi|218895174|ref|YP_002443585.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218546007|gb|ACK98401.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 660

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 348/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ+ I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQIGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|299820707|ref|ZP_07052596.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817728|gb|EFI84963.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 663

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   KEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT++RH    + +++++ ++GDIY 
Sbjct: 63  AKEQGISEQQYVDEVAEGFQELWKKLEISNTDFIRTTQERHKTGVQAIFERLVEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+   G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLAEVYRDEAGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +F HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVHIVGKEIIRFHTIYWPIILMALDLPLPKMIFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  T  D+++ +    V +E  +NM++     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGDVTPFDDALRTFKDDVAKEYEKNMEHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L ++ SL+S  ++Y D  +PW L K  +     ++V+    E +R +AILLQ F+ +   
Sbjct: 423 LTKLWSLISRTNKYIDETEPWALAKDESRKKELASVMTHLAESLRTIAILLQPFLTRAPG 482

Query: 472 KIFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +IF  L +  EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFMQLGLQAENLKKWDSIYTFGAIPDGTKVVKKGTPIFPRL 524


>gi|228963136|ref|ZP_04124306.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796521|gb|EEM43959.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 563

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|75759600|ref|ZP_00739686.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74492891|gb|EAO56021.1| Methionyl-tRNA synthetase  / Protein secretion chaperonin CsaA
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 669

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 12  EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 71

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 72  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 131

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 132 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 190

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 191 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 250

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 251 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 310

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 311 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 370

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 371 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 430

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 431 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 490

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 491 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 532


>gi|228918989|ref|ZP_04082369.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840638|gb|EEM85899.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 660

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|228898792|ref|ZP_04063075.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228860817|gb|EEN05194.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 660

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|218235634|ref|YP_002364888.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218163591|gb|ACK63583.1| methionine--tRNA ligase [Bacillus cereus B4264]
          Length = 660

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|289433525|ref|YP_003463397.1| Methionyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169769|emb|CBH26305.1| metS [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313639884|gb|EFS04591.1| methionyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 665

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  T   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK +F HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMIFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    R+N DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFIDRMNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   GA T  DE+++   + V+ +  ++M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGAVTPFDETLVDFKNNVVADYEKSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKDEEKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTNVVKKGTPIFPRL 525


>gi|16802223|ref|NP_463708.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500370|ref|ZP_03668719.1| methionyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503503|ref|ZP_03671810.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829268|ref|ZP_05233955.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254832524|ref|ZP_05237179.1| methionyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254901038|ref|ZP_05260962.1| methionyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913894|ref|ZP_05263906.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938315|ref|ZP_05270012.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255026302|ref|ZP_05298288.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|255029121|ref|ZP_05301072.1| methionyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|25009372|sp|Q8YAF2|SYM_LISMO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16409534|emb|CAC98392.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|258601679|gb|EEW15004.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610927|gb|EEW23535.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293591911|gb|EFG00246.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 664

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D+ ++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|47096170|ref|ZP_00233769.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284803084|ref|YP_003414949.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996225|ref|YP_003417993.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|47015418|gb|EAL06352.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284058646|gb|ADB69587.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061692|gb|ADB72631.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 665

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D+ ++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|228956480|ref|ZP_04118277.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039943|ref|ZP_04189708.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229142844|ref|ZP_04271287.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148448|ref|ZP_04276705.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500870|ref|YP_003662570.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228634990|gb|EEK91562.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640607|gb|EEK96994.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228727402|gb|EEL78594.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803170|gb|EEM49991.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296321922|gb|ADH04850.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 660

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|258510147|ref|YP_003183581.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476873|gb|ACV57192.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 650

 Score =  461 bits (1187), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/512 (44%), Positives = 326/512 (63%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YPN + HIGHAY  + AD +AR+ RL G DV F TGTDEHG KI + A+
Sbjct: 2   KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K F+D      +D+   LDISYDDFIRTTE RH      +++++  +GDIY   
Sbjct: 62  QAGLEPKAFLDPIIAWIQDLWKKLDISYDDFIRTTEARHERVVEQIFERLLQQGDIYLSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+Y+ + E+  G   Q        VQ++ EE YFFR+S Y D+LL YYE +
Sbjct: 122 YQGWYCTPCESYWAERELVDGKCPQC----GREVQFVREESYFFRMSKYVDRLLQYYEEN 177

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P+ R+ E+I +F++ GL+DL +SR +FDWG+ +P +P++++YVW+DAL NY++  
Sbjct: 178 PGFIEPVSRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAI 237

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GYL +    + KF   WPAD+HV+GKDI+RFHA+YWP  L++  LPLPKKVF HGF L K
Sbjct: 238 GYLSDDADERVKFERYWPADVHVVGKDIVRFHAVYWPIILMALGLPLPKKVFGHGFFLVK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP+ +++  G DA RYFL+REI  G+DG +  +G+ +R+N DLAN  G
Sbjct: 298 GGKMSKSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R+ +M+ +  DG++P PG+ T+ D ++  + + V  ++ ENM       ALA++ +
Sbjct: 358 NLVHRTAAMLNRFNDGVVPAPGSLTDVDRALRDLAAEVKAKVEENMDQLQFSVALAELWN 417

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           LV   ++Y D  +PW+L K    +R +TVLY  VE IR  AIL+Q F+      I +   
Sbjct: 418 LVRAANKYIDDCQPWKLNKEGERERLATVLYHMVEAIRVSAILVQPFMTDAPKAIREQFG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             DE   + S +  L P        +P+FPR 
Sbjct: 478 WGDEAFAWDSAEMGLGPSGQTVAEREPLFPRL 509


>gi|229107725|ref|ZP_04237362.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228675698|gb|EEL30905.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 660

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y + ++        K   G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVEPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|324324028|gb|ADY19288.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 660

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLISRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E +  ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTEEAHTSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|222528338|ref|YP_002572220.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455185|gb|ACM59447.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 653

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/517 (45%), Positives = 339/517 (65%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +D+  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+ F+K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGISVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAILMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG + +D L+ R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDSLRTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P A  + D  ++++   V +++   +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGIIHLPEAKEDLDNELITLAKEVYEKVCRCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L   K+   R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + DEN     ++S  Q  L P     K  DPIFPR +
Sbjct: 478 SKDENPDITTWESASQFSLIPEGTKVKRGDPIFPRIV 514


>gi|229027885|ref|ZP_04184040.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228733399|gb|EEL84226.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 660

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y      D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTVGCIPAGTKVEKG-QPIFPRL 523


>gi|229159212|ref|ZP_04287237.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624227|gb|EEK81028.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 660

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++   +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVSGIKELWKKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y      D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAYKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDESDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSAIGCIPAGTKVEKG-QPIFPRL 523


>gi|229165027|ref|ZP_04292823.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228618412|gb|EEK75441.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 660

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/525 (44%), Positives = 347/525 (66%), Gaps = 17/525 (3%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MKE  K  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI 
Sbjct: 1   MKEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDI
Sbjct: 61  KKAEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y   Y GWYS++DE +Y      D + +G     G+  ++ H  V+ + EE YFFR+  Y
Sbjct: 121 YLDEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKY 179

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            D+LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW
Sbjct: 180 VDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVW 239

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           +DAL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF
Sbjct: 240 VDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVF 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N
Sbjct: 300 AHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERIN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            DLAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N   
Sbjct: 360 FDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEF 419

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468
             AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+  
Sbjct: 420 SVALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTV 479

Query: 469 LANKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 480 APSKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|300119133|ref|ZP_07056834.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298723455|gb|EFI64196.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 660

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|163938046|ref|YP_001642930.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009548|ref|ZP_04166775.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053885|ref|ZP_04195320.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131046|ref|ZP_04259959.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163860243|gb|ABY41302.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228652383|gb|EEL08307.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721426|gb|EEL72946.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751692|gb|EEM01491.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 660

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/525 (44%), Positives = 347/525 (66%), Gaps = 17/525 (3%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MKE  K  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI 
Sbjct: 1   MKEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDI
Sbjct: 61  KKAEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y   Y GWYS++DE +Y      D + +G     G+  ++ H  V+ + EE YFFR+  Y
Sbjct: 121 YLDEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKY 179

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            D+LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW
Sbjct: 180 VDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVW 239

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           +DAL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF
Sbjct: 240 VDALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVF 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N
Sbjct: 300 AHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERIN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            DLAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N   
Sbjct: 360 FDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEF 419

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468
             AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+  
Sbjct: 420 SVALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTV 479

Query: 469 LANKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 480 APSKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|322382808|ref|ZP_08056652.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153277|gb|EFX45723.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 659

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/514 (43%), Positives = 343/514 (66%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+ + HIGHAY  +  D LAR+ RL G DV++ TGTDEHGQKI + A+
Sbjct: 5   KKTFYLTTPIYYPSDKLHIGHAYTTVAGDALARYKRLRGYDVMYLTGTDEHGQKIERKAK 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T + FVD      +++   +DISYDDFIRTTE RH ++  +++ ++ ++GDIY G 
Sbjct: 65  EKGMTPQAFVDNIVAGIKELWGKMDISYDDFIRTTEDRHKESVSVIFARLMEQGDIYLGE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ ++++   ADG+  +    PV+ M+EE YFFR+S Y D+LL YYE +
Sbjct: 125 YEGWYCTSCESFFPENKL---ADGKCPDC-GGPVEKMKEESYFFRMSKYADRLLQYYEEN 180

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P+DP++++YVWIDAL+NY++  
Sbjct: 181 PDFIQPESRKNEMINNFIKPGLEDLAVSRATFDWGVKVPNDPKHVIYVWIDALSNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  K
Sbjct: 241 GYGTKDSSKFDKYWPADVHLVGKEIIRFHTIYWPIMLMAMGLPLPKKVFGHGWLLMKDGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +I+  G+DALRYFL+RE+  G DG +  +   +R+N DLAN +GNL+
Sbjct: 301 MSKSKGNVVDPVTLIDRYGLDALRYFLLREVPFGADGQFTPESFVERINHDLANDLGNLL 360

Query: 363 SRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +R+V M++K +DG   +  PGA TE D  +L      + +  E M+N     AL+ + +L
Sbjct: 361 NRTVVMMMKYFDGKLQVYVPGA-TEYDADLLKTMEGSISKYEEAMENLEFSVALSALWTL 419

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y D  +PW L K+   +   +V+YV  E+ R ++ILLQ FV +   K++  L +
Sbjct: 420 IGRANKYIDETQPWVLAKEGKTETLGSVMYVLAEIQRIISILLQPFVTQTPAKMWSSLGI 479

Query: 480 AD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            + E   + S+    +L  G  + KT DP+FPR 
Sbjct: 480 REGEMTTWDSIYTFGKLPAGTQVKKT-DPMFPRL 512


>gi|118475810|ref|YP_892961.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118415035|gb|ABK83454.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 669

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 12  EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 71

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 72  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 131

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 132 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 190

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 191 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 250

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 251 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 310

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 311 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 370

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 371 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 430

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 431 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 490

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 491 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 532


>gi|229015441|ref|ZP_04172443.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021646|ref|ZP_04178233.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739649|gb|EEL90058.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745860|gb|EEL95860.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 660

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y      D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    E++RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEILRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|229170889|ref|ZP_04298492.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612555|gb|EEK69774.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 660

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 348/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGEKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKIFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRANKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|196041780|ref|ZP_03109070.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196027400|gb|EDX66017.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 660

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKIVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|196047404|ref|ZP_03114617.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862090|ref|YP_002747468.1| methionyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229182433|ref|ZP_04309685.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|196021806|gb|EDX60500.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788827|gb|ACO29044.1| methionine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228601013|gb|EEK58581.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 660

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|196250752|ref|ZP_03149439.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209702|gb|EDY04474.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 650

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/516 (43%), Positives = 337/516 (65%), Gaps = 14/516 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D LAR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDTLARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++E+ YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEQSYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K +DG+IP   G  T  DE ++     V+++  E M+      ALA V  L
Sbjct: 358 LNRTVAMIKKYFDGVIPPYRGPKTPFDEELVQTAREVVRQYEEAMERMEFSVALASVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K    R   ++V+    E +R  A+LLQ F+ +   +IF  L 
Sbjct: 418 IGRTNKYIDETQPWVLAKDESKREELASVMTHLAESLRHTAVLLQPFLTRTPERIFAQLG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
           +AD  R  +  D   + G +   T     +P+FPR 
Sbjct: 478 IAD--RSLKEWDSLYEFGLIPEGTNVQKGEPLFPRL 511


>gi|206972593|ref|ZP_03233536.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229176639|ref|ZP_04304044.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188324|ref|ZP_04315373.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|206732495|gb|EDZ49674.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228595123|gb|EEK52893.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606806|gb|EEK64222.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 660

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|138893709|ref|YP_001124162.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265222|gb|ABO65417.1| Methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 650

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/516 (43%), Positives = 337/516 (65%), Gaps = 14/516 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D LAR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDTLARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++E+ YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDCGR-PVEKVKEQSYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K +DG+IP   G  T  DE ++     V+++  E M+      ALA V  L
Sbjct: 358 LNRTVAMIKKYFDGVIPPYRGPKTPFDEELVQTAREVVRQYEEAMERMEFSVALASVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K    R   ++V+    E +R  A+LLQ F+ +   +IF  L 
Sbjct: 418 IGRTNKYIDETQPWVLAKDESKREELASVMTHLAESLRHTAVLLQPFLTRTPERIFAQLG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
           +AD  R  +  D   + G +   T     +P+FPR 
Sbjct: 478 IAD--RSLKEWDSLYEFGLIPEGTNVQKGEPLFPRL 511


>gi|228905835|ref|ZP_04069733.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853775|gb|EEM98534.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 660

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 347/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTNEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|134297944|ref|YP_001111440.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050644|gb|ABO48615.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 518

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/510 (44%), Positives = 332/510 (65%), Gaps = 7/510 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YP+   HIGHAY  + AD +AR+ RL G DV F TG+DEHGQKI +AA
Sbjct: 4   KKPNFYITTPIYYPSDNLHIGHAYTTVAADTMARYKRLTGYDVWFLTGSDEHGQKIERAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +N   T K +VD     F+ + + LD+SY+DFIRTT++RHH   +  ++++ D+GDIYK 
Sbjct: 64  KNKNQTPKEYVDHIVSGFKKLWERLDVSYNDFIRTTDERHHKVVQKFFQQLFDQGDIYKS 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E ++ +   Y+ A+G+  + Q   V+ + EE YFFR S Y ++ L + E 
Sbjct: 124 EYEGWYCTPCETFFTE---YQLAEGKCPDCQRE-VEKVREESYFFRQSKYAERWLKFIEE 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +PEFI P+ RRNE++SFVK GL+DL +SR TFDWGI++P DP++++YVW+DALTNY++  
Sbjct: 180 NPEFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIRVPFDPKHVVYVWVDALTNYISAL 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    +    KFWPAD+H++ KDI+RFHAI WP  L++ +LPLPKKV +HG++L    K
Sbjct: 240 GYDTGDNSLFQKFWPADIHLMAKDIVRFHAIIWPILLMALDLPLPKKVIAHGWLLLDSGK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP  +I++ GVDA+RYFL+RE+  G DG Y ++ L KR+N DLAN  GNL+
Sbjct: 300 MSKSKGNVVDPHVLIDKYGVDAVRYFLLRELPFGSDGLYSEEALVKRINTDLANDYGNLL 359

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS +M+ K   G++ TPGA    DE ++ + +   + + E M+   +  ALA +  +V 
Sbjct: 360 SRSATMMEKYQQGVLQTPGAPEGPDEELIDLATATPKLVEEYMEKSELSNALAAIWQMVG 419

Query: 423 EVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y +   PW L K N  +R +TVLY   EV+R   I++  F+P+L  +++  L + D
Sbjct: 420 RANKYLEETAPWTLAKNNETERLNTVLYNVAEVMRFATIMITPFMPQLPKRVWPQLGIED 479

Query: 482 ENR--CFQSLDQRLKPGFMLHKTFDPIFPR 509
           +     ++SL     P     K  + +FPR
Sbjct: 480 QTEIHTWESLRWGKLPVGTTVKRGEVLFPR 509


>gi|228937341|ref|ZP_04099988.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970227|ref|ZP_04130887.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976797|ref|ZP_04137210.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782893|gb|EEM31058.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789462|gb|EEM37381.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822299|gb|EEM68280.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326937830|gb|AEA13726.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 660

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRIVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|217957614|ref|YP_002336156.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229136885|ref|ZP_04265513.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217064186|gb|ACJ78436.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228646550|gb|EEL02756.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 660

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 343/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE    + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHISWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|229083353|ref|ZP_04215709.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699960|gb|EEL52589.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 660

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/525 (43%), Positives = 345/525 (65%), Gaps = 20/525 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EEKKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H  V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGH-AVELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG IP      TE D+++++    +L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFDGEIPAFKENVTEFDQTLVAFAQDILKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKL 469
           AL+ +  LVS  ++Y D  +PW L K   DR   AS + ++  E++RQ  I+L  F+   
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASAMAHLA-EMLRQTGIMLMPFLTAT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
            +KIF  L + DE   + S D     G +   T      PIFPR 
Sbjct: 481 PSKIFTQLGLTDE--AYHSWDSLSTIGCIPAGTKVVKGQPIFPRL 523


>gi|229067803|ref|ZP_04201121.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715287|gb|EEL67145.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 660

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLIDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|228912778|ref|ZP_04076426.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846838|gb|EEM91842.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 660

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 344/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y + ++        K   G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMVGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|49477589|ref|YP_034392.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196036355|ref|ZP_03103752.1| methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218901239|ref|YP_002449073.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228925292|ref|ZP_04088389.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931541|ref|ZP_04094448.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943845|ref|ZP_04106231.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229119701|ref|ZP_04248963.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|301051774|ref|YP_003789985.1| methionine--tRNA ligase [Bacillus anthracis CI]
 gi|49329145|gb|AAT59791.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|195990985|gb|EDX54956.1| methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218535747|gb|ACK88145.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228663726|gb|EEL19304.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228815802|gb|EEM62037.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828093|gb|EEM73820.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834339|gb|EEM79879.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|300373943|gb|ADK02847.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 660

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|52145179|ref|YP_081651.1| methionyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51978648|gb|AAU20198.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 660

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|30018309|ref|NP_829940.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229125556|ref|ZP_04254589.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|38258299|sp|Q81JA8|SYM1_BACCR RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|29893849|gb|AAP07141.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228657873|gb|EEL13678.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 660

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + ++ISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMNISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K + G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFSGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|206977934|ref|ZP_03238821.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|229194429|ref|ZP_04321233.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206743840|gb|EDZ55260.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|228589019|gb|EEK47033.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 660

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 343/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE    + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHISWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|229089170|ref|ZP_04220452.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228694133|gb|EEL47814.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 660

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|228950587|ref|ZP_04112722.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228809062|gb|EEM55546.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 660

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 345/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      + + + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKGLWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|321313708|ref|YP_004205995.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019982|gb|ADV94968.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 664

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/528 (42%), Positives = 341/528 (64%), Gaps = 26/528 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   + +   G+    +     +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I +  GA TE D+++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKVMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE+ + + S+       D +++ G       DP+FPR 
Sbjct: 483 EKMFEQLGITDESLKAWDSITAFGQLKDTKVQKG-------DPLFPRL 523


>gi|294496909|ref|YP_003560609.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346846|gb|ADE67175.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 660

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/518 (44%), Positives = 341/518 (65%), Gaps = 16/518 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+   
Sbjct: 8   FYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEKN 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT + +VD      +++ D +DISYDDFIRTTE RH +    ++ ++ ++GDIY   Y G
Sbjct: 68  VTPQQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYEG 127

Query: 127 WYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           WYS+ DE YY + ++        K   G+  ++ H PV+ + EE YFF++  Y D+LL++
Sbjct: 128 WYSVPDETYYTEHQLVDPIVENGKVVGGKSPDSGH-PVELVREESYFFKMGKYVDRLLAF 186

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWIDAL+NY
Sbjct: 187 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVIYVWIDALSNY 246

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GY    D S  K+WPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 247 ITSLGYDTENDESYRKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 306

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +R+N DLAN +
Sbjct: 307 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERINFDLANDL 366

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+V+MI K +DG+IPT  G  TE D  I+      + +  E M++     ALA +
Sbjct: 367 GNLVNRTVAMINKYFDGVIPTYEGNVTEFDALIVQAQKDTVNKYEEAMEDMEFSVALASI 426

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS  ++Y D  +PW L K    RA  ++V+    E IR +A+LLQ F+ +   KIF 
Sbjct: 427 WQYVSRTNKYIDETQPWALAKDENKRAELASVMTHLAESIRHIAVLLQPFLTRTPEKIFA 486

Query: 476 ILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            + V ++  + ++S  +   LK G  + K  +P+FPR 
Sbjct: 487 QIGVKEDVLKTWESTTRFNMLKEGTKVEKG-EPMFPRL 523


>gi|42779117|ref|NP_976364.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42735032|gb|AAS38972.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 660

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 346/523 (66%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE D ++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDGTLVTFAQDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLISRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + +E +  ++SL     +  G  + K  +PIFPR 
Sbjct: 482 SKMFAQLGLTEEAHTSWESLSTIGCIPAGTKVEKG-NPIFPRL 523


>gi|229917422|ref|YP_002886068.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468851|gb|ACQ70623.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 653

 Score =  458 bits (1179), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/510 (43%), Positives = 337/510 (66%), Gaps = 8/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+
Sbjct: 3   KPTFYITTPIYYPSAKLHIGHAYTTVAGDAIARYKRLKGFDVRYLTGTDEHGQKIQEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD+     + + D L+ISYDD+IRTTE RH      +++ +   GDIY G 
Sbjct: 63  EAGVTPQAFVDEVVEEIKVLWDRLEISYDDYIRTTEDRHKKVVEHVFETLLKNGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+ DE YY + ++    DG+  ++ H PV+ + EE YFFRLS Y D+L+ Y+ESH
Sbjct: 123 YEGWYSVPDETYYTESQL---VDGKSPDSGH-PVELVREECYFFRLSKYADRLIEYFESH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FILP  R+ E+I+ F+K GL+DL++SR TFDWG+++P +P++++YVW+DALTNY+++ 
Sbjct: 179 PDFILPESRKTEMINNFLKPGLQDLAVSRTTFDWGVQVPSNPKHVVYVWVDALTNYISSL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + D    ++WPAD+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG++L K  K
Sbjct: 239 GYGTDNDELFNRYWPADVHLVGKEIVRFHTIIWPALLMALDLPLPKQVFAHGWLLMKDGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DPI +I+  G+D++RY+L+RE+  G DG +  +    R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPIPLIDRYGLDSVRYYLLREVPFGADGTFTPEAFVDRLNFDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R+++MI K +DG IP   G  T  D  +L+V     ++  E M++     AL  +  LV
Sbjct: 359 NRTIAMIKKYFDGNIPAYNGNVTAFDAELLNVVKETTRKTEEAMEHMEFSVALTNIWQLV 418

Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D  +PW L K    R   ++V+     V+R +AI++Q F+ +   ++F  L +
Sbjct: 419 SRANKYIDETQPWVLVKEESKREELASVMTHLAGVLRHVAIMIQPFMTRAPKEMFRQLGL 478

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             E+  +++LD        +     PIFPR
Sbjct: 479 EGEDMSWEALDTFADFSDAVVTDGTPIFPR 508


>gi|302870971|ref|YP_003839607.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573830|gb|ADL41621.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 653

 Score =  458 bits (1179), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/517 (45%), Positives = 337/517 (65%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+ F+K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ +D LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGYFSEDALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    E D  +  +   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGVIYHPEEEEEIDNELKRLAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K      R  TVLY   EV+R +A+L++ F+P+   KI   L +
Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRVVAVLIEPFMPQTTPKILQQLGI 477

Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + DEN     ++S  Q  L P     K  +PIFPR +
Sbjct: 478 SKDENLDITTWESASQYGLIPEGTKVKRGEPIFPRII 514


>gi|295702276|ref|YP_003595351.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799935|gb|ADF37001.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 660

 Score =  458 bits (1178), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/518 (44%), Positives = 342/518 (66%), Gaps = 16/518 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+   
Sbjct: 8   FYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEKN 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT + +VD      +++ D +DISYDDFIRTTE RH +    ++ ++ ++GDIY   Y G
Sbjct: 68  VTPQQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYEG 127

Query: 127 WYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           WYS+ DE YY + ++        K   G+  ++ H PV+ + EE YFF++  Y D+LL++
Sbjct: 128 WYSVPDETYYTEHQLVDPIVENGKVVGGKSPDSGH-PVELVREESYFFKMGKYVDRLLAF 186

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWIDAL+NY
Sbjct: 187 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVIYVWIDALSNY 246

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GY    D +  K+WPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 247 ITSLGYGTENDENYRKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 306

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +R+N DLAN +
Sbjct: 307 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERINFDLANDL 366

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+V+MI K +DG+IPT  G  TE D  I+      + +  E M++     ALA +
Sbjct: 367 GNLVNRTVAMINKYFDGVIPTYEGNVTEFDALIVQAQKDTVNKYEEAMEDMEFSVALASI 426

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS +++Y D  +PW L K    RA  ++V+    E IR +A+LLQ F+ +   KIF 
Sbjct: 427 WQYVSRMNKYIDETQPWALAKDENKRAELASVMTHLAESIRHIAVLLQPFLTRTPEKIFA 486

Query: 476 ILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            + V ++  + ++S  +   LK G  + K  +P+FPR 
Sbjct: 487 QIGVKEDVLKTWESTTRFNMLKEGTKVEKG-EPMFPRL 523


>gi|146295253|ref|YP_001179024.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145408829|gb|ABP65833.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 655

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/517 (44%), Positives = 336/517 (64%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD LAR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHIGHTYCTVAADTLARYKRLQGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G T + +VD+   + +D+  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEVGKTPQKYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+ F+K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTLKWGIPVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ +D LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEDALKTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    + D  ++++   V +++ + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGIIHLPEVKEDLDNELITLAKEVYEKVCKCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L   K+   R  TVLY   EV+R +AIL++ F+P+   K+   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKHPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKMLAQLGI 477

Query: 480 A-DENRCFQSLDQRLKPGFMLHKTF----DPIFPRFL 511
           + DEN    S +     G +   T      P+FPR +
Sbjct: 478 SKDENPDITSWESAATFGLIRDGTKVKRDQPLFPRIV 514


>gi|312623342|ref|YP_004024955.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312203809|gb|ADQ47136.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 653

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/517 (45%), Positives = 338/517 (65%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +D+  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+ F+K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG + +D L+ R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDALRTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +D +I  P A  + D  ++++   V +++   +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDEIIHLPEAKEDLDNELITLAKEVYEKVCRCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L   K+   R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + DEN     ++S  Q  L P     K  DPIFPR +
Sbjct: 478 SKDENPDITAWESASQFGLIPEGTKVKRGDPIFPRIV 514


>gi|16077106|ref|NP_387919.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307847|ref|ZP_03589694.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312169|ref|ZP_03593974.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317102|ref|ZP_03598396.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321365|ref|ZP_03602659.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|586060|sp|P37465|SYM_BACSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|467427|dbj|BAA05273.1| methionyl-tRNA synthetase [Bacillus subtilis]
 gi|2632305|emb|CAB11814.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 664

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/528 (42%), Positives = 340/528 (64%), Gaps = 26/528 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   + +   G+    +     +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I +  GA TE D ++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDHTLTSVAEETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE+ + + S+       D +++ G       +P+FPR 
Sbjct: 483 EKMFEQLGITDESLKAWDSITAFGQLKDTKVQKG-------EPLFPRL 523


>gi|296329539|ref|ZP_06872025.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672736|ref|YP_003864407.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153282|gb|EFG94145.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305410979|gb|ADM36097.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 664

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/528 (42%), Positives = 340/528 (64%), Gaps = 26/528 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   + +   G+    +     +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I +  GA TE D+++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELHSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE  + + S+       D +++ G       +P+FPR 
Sbjct: 483 EKMFEQLGITDEALKAWDSITTFGQLKDTKVQKG-------EPLFPRL 523


>gi|313635219|gb|EFS01522.1| methionyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 665

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/522 (43%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  T   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK +F HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMIFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    R+N DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFIDRMNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +   IP   GA T  DE+++   + V+ +  ++M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFXXXIPAYQGAVTPFDETLVDFKNNVVADYEKSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKDEEKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTNVVKKGTPIFPRL 525


>gi|194017985|ref|ZP_03056592.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010322|gb|EDW19897.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 666

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/525 (43%), Positives = 340/525 (64%), Gaps = 17/525 (3%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E++K  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI 
Sbjct: 1   MPEKKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+   +T   ++D    + + +   LDIS DDFIRTTEKRH      +++K+ D+GDI
Sbjct: 61  QKAEEQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTKIIEQVFQKLLDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAY 172
           Y   Y GWYS+ DE +Y + +   V +   G+    +     +PV+ ++EE YFFR+S Y
Sbjct: 121 YLDQYEGWYSIPDETFYTETQLVDVERNEKGEVTGGKSPDSGHPVELIKEESYFFRMSKY 180

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            D+LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P++P++++YVW
Sbjct: 181 ADRLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPNNPKHVIYVW 240

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           IDAL NYLT  GY  + D    K+WPA++H++GK+I+RFH IYWP  L++ +LPLPK++F
Sbjct: 241 IDALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIF 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +RVN
Sbjct: 301 AHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            DLAN +GNL++R+V+M+ K +DG + +  G   E DE + +V  + ++   E M+N   
Sbjct: 361 YDLANDLGNLLNRTVAMVQKYFDGTLSSYKGPVNEFDEELKAVAEQTVKAYEEAMENLEF 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468
             AL+ V +L+S  ++Y D   PW L K    R    +V+Y   E +R  A+LL  F+ K
Sbjct: 421 SVALSNVWTLISRTNKYIDQTAPWVLAKDETKRKELHSVMYHLAESLRITAVLLTPFLTK 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510
              KIF  L + +E    +S D  L  G +   T    +P+FPR 
Sbjct: 481 TPEKIFFQLGIEEEK--LKSWDSILSFGAIQQATVQKGEPLFPRL 523


>gi|78044237|ref|YP_361414.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996352|gb|ABB15251.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 653

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/510 (44%), Positives = 333/510 (65%), Gaps = 9/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+   HIGHAY  + AD +ARF R+ G DV F TG+DEHGQKI + A++
Sbjct: 3   KSFYITTPIYYPSDNLHIGHAYTTVAADTMARFKRMTGYDVWFLTGSDEHGQKIERKAKS 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K +VD    +F+ +  +LDISYDDFIRTTE+RH    + +++K+ D+GDIYK  Y
Sbjct: 63  QGLSPKEYVDPIVDSFKHLWKLLDISYDDFIRTTEERHKKVVQAIFQKLYDQGDIYKSAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    EA++ + ++    DG+  +    PV+W  EE YFF++S Y D+LL + E +P
Sbjct: 123 EGWYCTPCEAFWTEGKL---IDGKCPDCGR-PVEWTREESYFFKMSKYADRLLKHIEENP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI+P  RRNE+I+F+K GL+DL +SR TF+WGI +P D ++++YVW+DALTNY++  GY
Sbjct: 179 EFIVPESRRNEMINFIKQGLEDLCVSRTTFNWGIPVPFDKKHVVYVWVDALTNYISALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + D    K+WPAD+H++GKDI+RFH + WP  LL+  + LPKKV  HG+ + +G K+S
Sbjct: 239 GTDDDHLFQKYWPADVHLVGKDIVRFHTVIWPIILLALGIELPKKVVGHGWFVLEGGKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP++++E+ GVDA+RYFLVRE+  G D  Y ++ L  R+N DLAN +GNL++R
Sbjct: 299 KSKGNVVDPVKLVEKYGVDAVRYFLVREMPLGLDAVYSEEALINRINVDLANDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM+ K   G IP P  + E D  ++ +   +  E  + M    +  ALA +  LV+ +
Sbjct: 359 TLSMLEKFLGGEIPLPSEYEEIDREVIELALALPAETEKLMDKFDLAGALANIWRLVTRL 418

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++Y D   PW L K    +R  TVLYV +E  R + +LL+  +P    K+   L V DE+
Sbjct: 419 NKYIDEVAPWSLNKEGKIERLKTVLYVVLEGYRFITVLLKPVMPNFPAKVSAQLGVNDES 478

Query: 484 R-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
              ++SL    RL  G  + K  +P+FPR 
Sbjct: 479 LFTWESLSNWGRLPAGVKIKKG-EPLFPRL 507


>gi|291482409|dbj|BAI83484.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 664

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/528 (42%), Positives = 341/528 (64%), Gaps = 26/528 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   + +   G+    +     +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I +  GA TE D+++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSL-------DQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + D++ + + S+       D +++ G       +P+FPR 
Sbjct: 483 EKMFEQLGITDDSLKAWDSITAFGQLKDTKVQKG-------EPLFPRL 523


>gi|312134269|ref|YP_004001607.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774320|gb|ADQ03807.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 653

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/517 (44%), Positives = 338/517 (65%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQEYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFSKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+ F+K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ ++ LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    E D  + S+   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGVIYLPEEKEEIDNELSSLAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K +    R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 SRANKYIDQTMPWVLGKDSSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 A-DEN---RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + DEN     ++S  Q  L P     K  + +FPR +
Sbjct: 478 SKDENLDITTWESASQFGLIPEGTKVKRGEHVFPRII 514


>gi|312792522|ref|YP_004025445.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312179662|gb|ADQ39832.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 653

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/517 (44%), Positives = 337/517 (65%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---IDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+ F+K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ ++ LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    E D  +  +   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGVIYLPEEKEEIDNELKDLAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K      R  TVLY   EV+R +AIL++ F+P+   KI + L +
Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILEQLGI 477

Query: 480 A-DENRCFQSLDQRLKPGFMLHKT----FDPIFPRFL 511
           + D+N    + +   + G +   T     +PIFPR +
Sbjct: 478 SKDKNPEITAWETAGQFGLIPEGTKVKRGEPIFPRIV 514


>gi|312877507|ref|ZP_07737468.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795710|gb|EFR12078.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 653

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/517 (44%), Positives = 336/517 (64%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---IDGKCPDCGR-PVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+ F+K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L+S  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMSLGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ ++ LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +D +I  P    E D  +  +   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDSVIYLPEEKEEIDNELKDIAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K      R  TVLY   EV+R +AIL++ F+P+   KI + L +
Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILEQLGI 477

Query: 480 A-DENRCFQSLDQRLKPGFMLHKT----FDPIFPRFL 511
           + D+N    + +   + G +   T     +PIFPR +
Sbjct: 478 SKDKNPEITAWETAGQFGLIPEGTKVKRGEPIFPRIV 514


>gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47777767|ref|YP_016640.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183072|ref|YP_026324.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317498|ref|ZP_00390457.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|167635109|ref|ZP_02393426.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641535|ref|ZP_02399783.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688925|ref|ZP_02880127.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707587|ref|ZP_02898040.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655324|ref|ZP_02936853.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569007|ref|ZP_03021908.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|229600122|ref|YP_002864689.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254682335|ref|ZP_05146196.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724179|ref|ZP_05185964.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733574|ref|ZP_05191295.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744658|ref|ZP_05202337.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254762419|ref|ZP_05214261.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38258301|sp|Q81W03|SYM1_BACAN RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|30253549|gb|AAP24091.1| methionine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47551472|gb|AAT29115.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176999|gb|AAT52375.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|167510520|gb|EDR85918.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529583|gb|EDR92333.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127583|gb|EDS96457.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667149|gb|EDT17910.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080165|gb|EDT65258.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559931|gb|EDV13915.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|229264530|gb|ACQ46167.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 660

 Score =  455 bits (1170), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/523 (43%), Positives = 344/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+  + G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|78223524|ref|YP_385271.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78194779|gb|ABB32546.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 509

 Score =  455 bits (1170), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 224/505 (44%), Positives = 327/505 (64%), Gaps = 8/505 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA  AG
Sbjct: 5   FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAANAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T     D+  + F+ + + LDISY+DFIRTT++RH      L++++  KGDIY G Y  
Sbjct: 65  ETPLELADRVVKRFQALWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEYED 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++    DG+  +  + PV+ ++EE YFFR+S YQ++LL++ E++P+F
Sbjct: 125 WYCTPCETFWTETQLI---DGKCPDC-NRPVEKLKEESYFFRMSKYQEQLLAHIEANPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ISFVK GL+DLS+SR +F+WGI +P + ++++YVW DALTNY+T  GY D
Sbjct: 181 IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGYPD 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
              G+  KFWP D H+IGKDILRFHA+YWP FL++A LP+P+KVF+HG+   +G+K+SKS
Sbjct: 241 QA-GNYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMSKS 299

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           L NV++P  ++++ G+DA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL+SRS 
Sbjct: 300 LQNVVEPNMLVDKYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSRST 359

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K + G +P PGA TE D +  +    ++ ++   M      + L  +  ++S  ++
Sbjct: 360 AMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEMAFSKGLQAIWEVISAGNK 419

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K     +R  T++Y  +E  R +  LL AF+P+ A K    L   +  R
Sbjct: 420 YIDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEALR 479

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPR 509
                  +L PG  + K  + +FPR
Sbjct: 480 DEDLAWGKLVPGTQIAKA-EALFPR 503


>gi|157690820|ref|YP_001485282.1| methionyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679578|gb|ABV60722.1| methionine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 666

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/526 (43%), Positives = 342/526 (65%), Gaps = 19/526 (3%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E++K  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI 
Sbjct: 1   MPEKKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+   +T   ++D    + + +   LDIS DDFIRTTEKRH      +++K+ D+GDI
Sbjct: 61  QKAEEQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTIIIGQVFQKLLDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY------KG--ADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           Y   Y GWYS+ DE +Y + ++       KG    G+  ++ H PV+ ++EE YFFR+S 
Sbjct: 121 YLDQYEGWYSIPDETFYTETQLVDVEHNEKGEVTGGKSPDSGH-PVELIKEESYFFRMSK 179

Query: 172 YQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           Y D+LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P++P++++YV
Sbjct: 180 YADRLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPNNPKHVIYV 239

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           WIDAL NYLT  GY  + D    K+WPA++H++GK+I+RFH IYWP  L++ +LPLPK++
Sbjct: 240 WIDALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQI 299

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           F+HG++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +RV
Sbjct: 300 FAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERV 359

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQL 409
           N DLAN +GNL++R+V+M+ K +DG + +  G   E DE + +V  + ++   E M+N  
Sbjct: 360 NYDLANDLGNLLNRTVAMVQKYFDGTLSSYKGPVNEFDEELKAVAEQTVKAYEEAMENLE 419

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVP 467
              AL+ V +L+S  ++Y D   PW L K    R    +V+Y   E +R  A+LL  F+ 
Sbjct: 420 FSVALSNVWTLISRTNKYIDQTAPWVLAKDESKRKELHSVMYHLAESLRITAVLLTPFLT 479

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510
           K   KIF  L + +E    +S D  L  G +   T    +P+FPR 
Sbjct: 480 KTPEKIFFQLGIEEEK--LKSWDSILSFGAIQQATVQKGEPLFPRL 523


>gi|291278499|ref|YP_003495334.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753201|dbj|BAI79578.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/514 (44%), Positives = 334/514 (64%), Gaps = 19/514 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQKI +AAQ  G
Sbjct: 6   FYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLCGYDVFFLTGTDEHGQKIEQAAQKKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   D     F+ +   L+IS D FIRTT++ H  T + ++KK+ + GDIY G Y G
Sbjct: 66  ITPKELADTVVERFKSLWVKLNISNDKFIRTTDEEHKKTVQKIFKKMQENGDIYLGEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E Y+ + ++    DG +  +       ++E  YFF++S YQ++LL Y + +P+F
Sbjct: 126 WYCTPCETYWTETQLL---DGNHCPSCGRETHKLKEPSYFFKMSKYQNELLKYIQENPDF 182

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R+NE++SF+K GLKDLS+SR +F WGI +P D  +++YVWIDALTNY++  GYLD
Sbjct: 183 IQPTSRKNEIVSFIKEGLKDLSVSRVSFKWGIPVPGDENHVIYVWIDALTNYISAIGYLD 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                K K+WPAD+H++GKDILRFH +YWP  L+SA LPLPKKVF+HG+   +G+K+SKS
Sbjct: 243 ETKQFK-KYWPADVHLVGKDILRFHTVYWPTMLMSAGLPLPKKVFAHGWWTVEGQKMSKS 301

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP  +++  GVDA+RYFL+RE+  G DG +    L  R+N DLAN +GNL++R++
Sbjct: 302 LGNAIDPNWLVDTFGVDAIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGNLLNRTM 361

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            M+ + ++G+IP      E+D+ +L+    V  E+  ++ N   ++AL  +  LVSE+++
Sbjct: 362 GMVKRYFNGIIPEYKVEDETDKELLAKIEEVFDEVDTHLNNIAFNKALISIWQLVSELNK 421

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDI-LF 478
           Y D   PW L K  +  DR  +VLY+ ++ IR L++L+  F+P+ + +I      DI +F
Sbjct: 422 YIDKNAPWMLAKDESKRDRLESVLYLVLDGIRILSLLIYPFMPQTSEEIRRQLNIDIDVF 481

Query: 479 VADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            +D    F+ L   ++LKPG  L +    +FPR 
Sbjct: 482 KSD----FEDLKKVKQLKPGLKLGEA-KQLFPRI 510


>gi|319790219|ref|YP_004151852.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114721|gb|ADU97211.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 526

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/475 (48%), Positives = 317/475 (66%), Gaps = 6/475 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++T I Y N +PH+GHAY    ADV+ARF+R  G DV F TGTDEHGQKI +AA+ 
Sbjct: 3   EKFYVTTPIYYVNDKPHLGHAYTTTAADVVARFNRFLGRDVFFLTGTDEHGQKIQQAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K FVD+    F+ + +VL+ISYD FIRTT+  H    + ++ K  + GDIY G Y
Sbjct: 63  MGMSPKEFVDRLVPVFKKLWEVLNISYDHFIRTTDPEHVKAVQHIFMKCYENGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E YY + ++    DG+   A    V  ++EE YFFRLS YQDKLL  YE +P
Sbjct: 123 EGWYCIPCETYYTEKDL---IDGKLCPACKREVTRVKEESYFFRLSKYQDKLLELYEKNP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVI+FVK GLKDLS+SR +F WGI +P + ++++YVW DALTNYLT  GY
Sbjct: 180 DFIGPEFRRNEVINFVKQGLKDLSISRTSFSWGIPVPINEKHVIYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+ +    ++WPADLH++GKDILRFHA+YWPAFL+SA LP+PK+VF+HG+   +GEK+S
Sbjct: 240 PDDTE-RLNRYWPADLHLVGKDILRFHAVYWPAFLMSAGLPVPKRVFAHGWWTVEGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP EV+E+ GVD +R+FL RE++ G DG +  + L  R+N +LAN +GNL +R
Sbjct: 299 KSKGNVVDPFEVVEKFGVDQVRFFLFREVSFGLDGDFSYEKLVARINGELANDLGNLFNR 358

Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           ++SM+ K    ++P P G F E D+ I +     L+ ++E +    + +AL ++   V  
Sbjct: 359 TLSMLKKYRKSVVPEPKGEFDELDKKIANKALATLKALKELIPRAELSKALDEIWQFVGF 418

Query: 424 VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ Y D + PW LKK   D    TVLY  VE +R +   L  ++P  A K+  +L
Sbjct: 419 VNYYIDRRAPWSLKKEGKDAELDTVLYNMVEALRFITAFLYPYMPASAEKMVQLL 473


>gi|297528406|ref|YP_003669681.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251658|gb|ADI25104.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 650

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/514 (43%), Positives = 336/514 (65%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDCG-RPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IP   G  T  D+ +      V+++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPPYRGPKTPFDQELAQTAREVVRQYEEAMEGMEFSVALAAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     D  + V+    E +R +A+LLQ F+ +   ++F  L 
Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHMAVLLQPFLTRTPERMFAQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           + D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511


>gi|297582380|ref|YP_003698160.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140837|gb|ADH97594.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 662

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/522 (43%), Positives = 340/522 (65%), Gaps = 15/522 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   YI+T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A
Sbjct: 4   EKNTFYITTPIYYPSAKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G + + FVD  S + +++   LDISYDDFIRTTE RH    + ++++  ++GDIY  
Sbjct: 64  EENGKSPQQFVDDISSDIQELWKKLDISYDDFIRTTEDRHKQVVQHIFERFLEQGDIYLD 123

Query: 123 CYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            Y GWYS+ DE +Y +        D+      G+  ++ H PV+ + E+ YFF++S Y D
Sbjct: 124 EYEGWYSVSDETFYTELQLEDKEYDDNGNVTGGKSPDSGH-PVEKVREKSYFFKMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL+YYE +PEFI P  R+NE+I+ F+K GL+DL++SR +F WG+ +  DP++++YVWID
Sbjct: 183 RLLAYYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFRWGVPVKSDPEHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + +G     WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 243 ALSNYITALGYSTDENGLFQSHWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+DALRY+L+RE+  G DG +  +G  +RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVPLIERYGLDALRYYLLREVPFGSDGVFTPEGFVERVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++RSV+MI K +DG +P      T  DE++  +    + ++ E+M+N     
Sbjct: 363 LANDLGNLLNRSVAMINKYFDGEVPAYVKDATSYDETLTDLVEATVNKVEESMENMQFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  L+S  ++Y D  +PW L K  T  ++  +VL+  VE +RQ++I+LQ F+ +  
Sbjct: 423 ALTAIGQLISRTNKYIDETQPWILAKDETAREQLGSVLHHLVESLRQVSIMLQPFMTETP 482

Query: 471 NKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            KI + L + D    + +L    ++  G  +    +PIFPR 
Sbjct: 483 KKIQEQLSIPDSLMGWDTLVTFGQIPAGKKVVAKGEPIFPRL 524


>gi|312128513|ref|YP_003993387.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778532|gb|ADQ08018.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 653

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/517 (44%), Positives = 335/517 (64%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSEKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G T + +VD+   + +D+  +++ISYDDFIRTTE RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEVGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEDRHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQL---VDGKCPDCGR-PVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+ F+K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG + +D LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDALKTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I       + D  ++++   V +++ + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGIIHLTEEKEDLDNELITLAKEVYEKVCKCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L   K+   R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 A-DENRCFQSLDQRLKPGFMLHKT----FDPIFPRFL 511
           + DEN    + +   + G +   T     +PIFPR +
Sbjct: 478 SKDENPDITAWESASQFGLIPEGTKVQRGEPIFPRIV 514


>gi|323701662|ref|ZP_08113334.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533435|gb|EGB23302.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 514

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/509 (43%), Positives = 323/509 (63%), Gaps = 7/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIGHAY  + AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 3   KPTFYITTPIYYPSDKLHIGHAYTTVAADAMARFKRLTGYDVWFLTGSDEHGQKIERAAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T K +VD     F+ +   LD+SY+DFIRTT++RH    + +++++ D+GDIYK  
Sbjct: 63  AKNQTPKEYVDHIVDGFKKLWSRLDVSYNDFIRTTDERHRKVVQQIFQQLYDQGDIYKSE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E ++ +   Y+  +G+  + Q   V+ + EE YFFR S Y ++ L + E +
Sbjct: 123 YEGWYCTPCETFFTE---YQLVEGKCPDCQRE-VEKVREESYFFRQSKYAERWLKFIEEN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE++SFVK GL+DL +SR TFDWGI +P DP++++YVW+DALTNY++  G
Sbjct: 179 PDFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIPVPFDPKHVVYVWVDALTNYISALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    KFWPAD+H++GKDI+RFH I WP  L++ NLPLPKKV  HG++L    K+
Sbjct: 239 YGSEDDSLYRKFWPADIHLVGKDIVRFHTIIWPIMLMALNLPLPKKVIGHGWLLLDSGKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  ++++ GVDA+RYFL+RE+  G DG Y ++ L KR+N DLAN  GNL+S
Sbjct: 299 SKSKGNVVDPHTLVDKYGVDAVRYFLLRELPFGSDGLYSEEALVKRINTDLANDYGNLLS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M+ K  +G++  PG     D  ++ +     + + E M    I  ALA +  LV  
Sbjct: 359 RSATMVQKYQEGVLQAPGPAAGPDAELIDLAINTPKLVAEYMDKSEISNALAAIWQLVGR 418

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD- 481
            ++Y +   PW L K   P+R +TVLY   EV+R + I+   F+P L  +++  L +AD 
Sbjct: 419 ANKYLEETAPWSLAKAGQPERLNTVLYNVAEVVRFVTIMASPFMPNLPQRVWPQLGIADK 478

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            E   ++SL     P     +  + +FPR
Sbjct: 479 PELHTWESLRWGSLPAGTTVQRGEVLFPR 507


>gi|167629315|ref|YP_001679814.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592055|gb|ABZ83803.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 668

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/520 (43%), Positives = 327/520 (62%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R   YI+T I YP+  PHIGHAY  +  D +AR+ RL G DV F TG DEHGQKI +A
Sbjct: 4   QPRPTFYITTPIYYPSGNPHIGHAYTTVATDTMARYKRLRGCDVWFLTGLDEHGQKIERA 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+    ++D  +  F+ + + L+I+YDDFIRTTE+RH    +++++KI DKGDIYK
Sbjct: 64  AQGKGMAPIDYLDPVAVTFKKLWERLEITYDDFIRTTEERHKKAVQVIFQKIWDKGDIYK 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y GWY    EA++ + ++  G  G+      + PV+ M+EE YFFR+S Y D+LL + 
Sbjct: 124 SEYEGWYCTPCEAFWPERQLKIGEKGEKLCPDCDRPVERMKEESYFFRMSKYADRLLQHI 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +PEFI P+ RRNE++SF+K GL+DL +SR TF WGI +P +  +++YVW DAL+NY+T
Sbjct: 184 EENPEFIQPVSRRNEMVSFIKQGLEDLCVSRTTFKWGIPVPINANHVIYVWFDALSNYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + D    ++WPAD+H++GKDI+RFH I WP  L++   PLPK+VFSHG+ L + 
Sbjct: 244 ALGYGSDDDEKYRRYWPADIHLVGKDIVRFHTIIWPIILMALGEPLPKQVFSHGWFLLES 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP  + +  GVDA RYFL+RE+  G+D  + ++ L  R+N DLAN +GN
Sbjct: 304 GKMSKSKGNVVDPFMLADRYGVDAFRYFLIREMIGGQDALFSEETLISRINTDLANDLGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L+ RS+SM+ +   G++  P A  E   ++ I  + ++ + +    M    +  A + + 
Sbjct: 364 LLHRSLSMVERFSGGIVRAPEAAAEGPLEKEIRELTAKTVADFGALMDRFELANAHSALW 423

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            L+  +++Y D + PW L K    +A    VLY  VE +R  AILLQA +P +A KIF  
Sbjct: 424 KLIGRMNKYIDERAPWSLAKKPEAKAELEAVLYTMVESLRITAILLQAAMPNVAGKIFAQ 483

Query: 477 LFVADENR---CFQSLDQR---LKPGFMLHKTFDPIFPRF 510
           L ++ ENR   C  + D     L P  +     DPIFPR 
Sbjct: 484 LGLSGENRPASCLMTWDAARWGLFPDGVKVAKGDPIFPRI 523


>gi|328551739|gb|AEB22231.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328909999|gb|AEB61595.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 663

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/522 (42%), Positives = 337/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+     + +   LDIS+DDFIRTTE RH +    +++K+ D GDIY 
Sbjct: 63  AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   V +   G+    +     +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I +  G  T+ D+ + SV    +Q   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDQELSSVAGETVQAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKL 469
           AL+ +  L+S  ++Y D   PW L K +P++     +V+Y   E +R  A+LLQ F+ + 
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAK-DPEKEKELRSVMYHLAESLRISAVLLQPFLTQT 481

Query: 470 ANKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             K+F  L V D++ + + S+    +      K  +P+FPR 
Sbjct: 482 PEKMFAQLGVEDQSLKAWDSIQTFGQLKSTKVKKGEPLFPRL 523


>gi|308171929|ref|YP_003918634.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604793|emb|CBI41164.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 663

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/522 (42%), Positives = 337/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+     + +   LDIS+DDFIRTTE RH +    +++K+ D GDIY 
Sbjct: 63  AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   V +   G+    +     +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I +  G  T+ D+ + SV    +Q   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDQELSSVAGETVQAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKL 469
           AL+ +  L+S  ++Y D   PW L K +P++     +V+Y   E +R  A+LLQ F+ + 
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAK-DPEKEKELRSVMYHLAESLRISAVLLQPFLTQT 481

Query: 470 ANKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             K+F  L V D++ + + S+    +      K  +P+FPR 
Sbjct: 482 PEKMFAQLGVEDQSLKAWDSIQTFGQLKSTKVKKGEPLFPRL 523


>gi|56418566|ref|YP_145884.1| methionyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|56378408|dbj|BAD74316.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 650

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/514 (43%), Positives = 336/514 (65%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIILMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IP   G  T  D+ ++     V+++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPPYRGPKTPFDQELVQTAREVVRQYEEAMEGMEFSVALAAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     D  + V+    E +R  A+LLQ F+ +   ++F  L 
Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHTAVLLQPFLTRTPERMFAQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           + D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511


>gi|261417531|ref|YP_003251213.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765188|ref|YP_004130689.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261373988|gb|ACX76731.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110054|gb|ADU92546.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 650

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/514 (43%), Positives = 336/514 (65%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDCG-RPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI + +DG+IP   G  T  D+ ++     V+++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIERYFDGVIPPYRGPKTTFDQELVQTAREVVRQYEEAMEGMEFSVALAAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     D  + V+    E +R  A+LLQ F+ +   ++F  L 
Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHTAVLLQPFLTRTPERMFAQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           + D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511


>gi|165872552|ref|ZP_02217184.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|227812711|ref|YP_002812720.1| methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254756363|ref|ZP_05208392.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|164711680|gb|EDR17225.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|227004168|gb|ACP13911.1| methionine--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 660

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 343/523 (65%), Gaps = 16/523 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+  + G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DIS DDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISCDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+D
Sbjct: 182 RLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVD 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 302 GWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAP 481

Query: 471 NKIFDILFVADE-NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 482 SKMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEKG-QPIFPRL 523


>gi|311070685|ref|YP_003975608.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871202|gb|ADP34677.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 664

 Score =  451 bits (1161), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/524 (42%), Positives = 338/524 (64%), Gaps = 18/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QDKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTE RH      +++K+ D GDIY 
Sbjct: 63  AEEENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTESRHKVVIEKVFQKLFDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   + +   G+    +     +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL++YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLAFYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  G+    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGFDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG + +  G  TE D+++ SV    ++     M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGNLGSYEGTITEFDQTLSSVAEETVKSYERAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K         +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEKELQSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
            K+F+ L + DE    ++ D   + G  L+KT     DP+FPR 
Sbjct: 483 KKMFEQLGITDE--TLKAWDSITRFG-QLNKTKVQKGDPLFPRL 523


>gi|288554646|ref|YP_003426581.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545806|gb|ADC49689.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 666

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/524 (42%), Positives = 342/524 (65%), Gaps = 16/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  Y++T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MSENKTFYLTTPIYYPSAKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T + FVD+   + + +   LDISYDDFIRTTE RH    + +++++ ++GDIY
Sbjct: 61  KAAEKGLTPQQFVDEIVADIQSLWKKLDISYDDFIRTTEDRHKKVVQTIFERLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
              Y GWYS+ DE +Y +        DE  K   G+  ++ H PV+ + E+ YFF++S Y
Sbjct: 121 LDEYEGWYSIPDETFYTELQLVDPIRDEDGKIIGGKSPDSGH-PVEKVREQSYFFKMSKY 179

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            D+LL +YE +P FI P  RRNE+I+ F+K GL+DL++SR +F WG+++P +P++++YVW
Sbjct: 180 ADRLLKFYEENPTFIQPESRRNEMINNFIKPGLEDLAVSRTSFKWGVQVPSNPEHVVYVW 239

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           IDAL+NY+T  GY  + D    K+WPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF
Sbjct: 240 IDALSNYITALGYGQDNDEFYQKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVF 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG++L K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +G  +RVN
Sbjct: 300 AHGWLLMKDGKMSKSKGNVVDPETLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERVN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            DLAN +GNL++R+V+MI K +DG IPT     T  D  +L + +  + ++   M+    
Sbjct: 360 YDLANDLGNLLNRTVAMINKYFDGSIPTYVKDATPFDADLLDLVNATVTKVENAMEEMEF 419

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             AL  +  LVS  ++Y D  +PW L K  +  +   +V+Y   E +R +++L+Q F+ +
Sbjct: 420 SVALTAIWQLVSRTNKYIDETQPWMLAKDDSKKEELGSVMYHLAESLRYISVLIQPFLTE 479

Query: 469 LANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
              K+++ L + +E   ++SL +  ++  G  + K   PIFPR 
Sbjct: 480 TPKKVWEQLGLGEEVTTWESLSEFAQIPAGVTVQKG-KPIFPRL 522


>gi|217077634|ref|YP_002335352.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037489|gb|ACJ76011.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 638

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/504 (43%), Positives = 333/504 (66%), Gaps = 15/504 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N++PHIG AY  II D++AR+ RL G +V + TGTDEHGQKI +AA+ 
Sbjct: 2   KKFYITTPIYYVNSEPHIGSAYTTIIGDIIARYKRLMGYEVFYLTGTDEHGQKIMQAAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D+ S+ F  +   L I+ D FIRTT++ H  T +    K+ +  DIYKG Y
Sbjct: 62  QGKTPQQLCDELSKKFEQLWKDLKITNDYFIRTTDEEHIKTVQFFVSKMLENEDIYKGKY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY +  E Y+++DE+ K  +      + H P+ ++EEE YFFRLS Y + LL +++ +
Sbjct: 122 KGWYCVPCETYWSEDEIEKDENNNPVCPSCHRPLNFVEEENYFFRLSKYTEPLLKHFKEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ P  R+NE++  ++ GLKDLS++R TFDWGI +P+DP++++YVW+DAL NY++  G
Sbjct: 182 PDFVEPEFRKNEMLKILEEGLKDLSITRTTFDWGIPMPNDPKHVIYVWVDALINYISAIG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + +  K K+WPADLH+IGK+I RFH++ WPA L+S  LPLPKK+F+HG++   G+KI
Sbjct: 242 YGKDEETFK-KWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFAHGWLTVNGQKI 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP E +++ G D +RY+L R+I  GKDG + ++ L  R+N+DLAN  GNL+ 
Sbjct: 301 SKSLGNAIDPREFVKKYGNDVIRYYLARDIVFGKDGDFSEENLVNRLNSDLANDYGNLLH 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++M++K++D  IPTP +  ESD+ ++     + +E  E M++  +  AL  + S + +
Sbjct: 361 RTLAMVVKNFDSKIPTPSSLNESDKELIEKFKNLKKEYTEYMESYKLTNALESIWSYIRD 420

Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           V++YFD  KPW L K+ N +R  T+LY T+E   ++A LL  F+P  + ++         
Sbjct: 421 VNKYFDENKPWVLAKEGNKERLGTILYNTLEAFIKIASLLLPFMPDSSKEV--------- 471

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPI 506
              F+ L Q   P F+L+  ++ +
Sbjct: 472 ---FRRLGQEFNPEFVLNTEWNSL 492


>gi|255659102|ref|ZP_05404511.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848546|gb|EEX68553.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 650

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/479 (45%), Positives = 322/479 (67%), Gaps = 6/479 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+A+ HIGHAY   IAD +ARFHRL G DV F TG+DEHGQKI +
Sbjct: 1   MTEKKPFYITTPIYYPSAKLHIGHAYCTTIADSIARFHRLIGDDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT   +VD+    F+++   L IS DDFIRTT+KRH    + ++ +I  KGDIY
Sbjct: 61  KAEEAGVTPIEYVDKIVAGFQNLWKRLHISNDDFIRTTQKRHERVVQEIFNRIYAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+ + ++    +G   +  H PVQ + EE YFF++S Y D++L Y 
Sbjct: 121 KGAYKGLYCTPCESYWTEHQL--DENGCCPDC-HRPVQEVSEEAYFFKMSKYADRVLQYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E HP+FI P+ RRNE+I+F+K GL DL +SR +F+WGI +P DP++++YVW DALTNYLT
Sbjct: 178 EDHPDFIQPVSRRNEMINFIKQGLDDLCISRTSFNWGIPVPIDPKHVIYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+LD P+    K+WPADLH++GK+I+RFH I WP  L++ +LPLPKKV+ HG+++  G
Sbjct: 238 PIGFLDAPEKFH-KYWPADLHLVGKEIVRFHTIIWPCILMALDLPLPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+DP  +I+E G DA+RYFL+REI  G+DG + +D L +R+N+DLAN +GN
Sbjct: 297 DKMSKSKGNVVDPNGLIDEFGADAIRYFLLREINLGQDGNFSRDALIQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R+++M +K  +G++  P   +E D+S+ +     +    +NM++  +   + +V + 
Sbjct: 357 LLHRTLNMTIKFQNGVLLAPQGESEVDKSLKADAKETVDFFEKNMKDMQLSATIKKVWAF 416

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +S  ++Y D   PW L K        + V+Y   E +R +++L+  F+P  A +I+  L
Sbjct: 417 ISRANKYIDETTPWALAKDPAKKQELANVMYNLAESLRIISVLISPFMPVTAERIWKQL 475


>gi|213019168|ref|ZP_03334975.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995277|gb|EEB55918.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 472

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/475 (48%), Positives = 318/475 (66%), Gaps = 9/475 (1%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
           +L G +V FTTGTDEHGQKI KAA+  G+  K F D+ S  FR +A++++  YDDFIRTT
Sbjct: 2   KLAGKNVKFTTGTDEHGQKIEKAAKTKGIEPKEFTDEISVTFRKLAELMNFDYDDFIRTT 61

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           E+RH      LW ++ ++G IY   YSGWYS+RDEA+Y + E+  G            VQ
Sbjct: 62  EERHEKAVIALWNRLEERGQIYLDSYSGWYSVRDEAFYQESELIYGR-----APTGAEVQ 116

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W++EE YFFRLS++Q+KLL  YE+ P FI P  R+NEV+SFVKSGL DLS+SR +F+WGI
Sbjct: 117 WIKEESYFFRLSSWQNKLLELYENQPNFIFPESRKNEVVSFVKSGLTDLSISRTSFNWGI 176

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLHVIGKDILRFHAIYWP 276
           K+P++ ++++YVWIDALTNYLT+ G+ +  D    KFW    ++HVIGKDILRFHA+YWP
Sbjct: 177 KVPENDKHVIYVWIDALTNYLTSIGFPNIEDEEYKKFWTNSFNVHVIGKDILRFHAVYWP 236

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + EE GVD LRYFL+RE + G
Sbjct: 237 AILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPINLAEEFGVDQLRYFLLREASFG 296

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +DG + K  +  R+N++LAN IGNLV R++S + K   G++P        D+  L  C  
Sbjct: 297 QDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCFGVVPVVDRNLLKDDESLPNCKA 356

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++ ++ +++     ++ +  +I++ S+ + Y D   PW L KT+ +R   V+Y  +E IR
Sbjct: 357 IIDQVMDHLSKYEFNQIILLIINISSKANAYIDKSAPWTLSKTDRERMDLVIYKLLEYIR 416

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            + ILLQ  VPK A  I D L +  E R  +SL +  +  G  L K   PIF RF
Sbjct: 417 MIGILLQPIVPKSAKMILDQLQIPKEQRDLKSLCNACVSLGITLPKP-TPIFLRF 470


>gi|121534360|ref|ZP_01666184.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307130|gb|EAX48048.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 640

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/514 (45%), Positives = 337/514 (65%), Gaps = 14/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YP+ + HIGHAY   IAD +AR+ RL G DV F TG+DEHGQKI + A+
Sbjct: 3   RKSFYITTPIYYPSDRLHIGHAYCTTIADAIARYKRLAGYDVFFLTGSDEHGQKIERKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT   +VD+   +F+ + + L+IS DDFIRTTE RH +  + +++KI D+GDIYK  
Sbjct: 63  EHGVTPIEYVDKIVASFKHLWEKLNISNDDFIRTTETRHKEVVQSIFQKIYDQGDIYKAT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E ++ + ++    DG+  +    PV+ ++EE YFFRLS YQD+LL Y E +
Sbjct: 123 YEGQYCTPCETFWLERQL---VDGKCPDCGR-PVELVQEESYFFRLSKYQDRLLQYIEEN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR TFDWGI +P D ++++YVW DAL NY+T  G
Sbjct: 179 PDFIQPASRRNEMINFIKSGLEDLCVSRTTFDWGIPVPFDTKHVVYVWFDALVNYITAAG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL + +    K+WPAD+H++GK+I+RFH I WP  L++  + LPK V+ HG+++ +G+K+
Sbjct: 239 YLHDREKFN-KYWPADVHLVGKEIVRFHTIIWPIILMALGIELPKMVYGHGWLVVEGDKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVIDP+ +I+E G DA+RYFL++EI  G DG + ++ L  R+NADLAN +GNL+ 
Sbjct: 298 SKSKGNVIDPLALIDEFGADAIRYFLLKEITLGLDGNFSREALISRINADLANDLGNLLH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++SMI +   G+I  PGA    D  ++ +         ++M+N  I+ A+ +V  L+  
Sbjct: 358 RTLSMIGRFNGGVIEGPGANEPIDLELVELAQNTAAAYEKHMENMEINAAIKEVWGLIGR 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K  T   R +TVLY   EV+R ++IL+  F+P+ A KI+  L + D
Sbjct: 418 ANKYIDETAPWALAKDATKKSRLNTVLYNLAEVLRIVSILISPFMPQAAPKIWSQLGIED 477

Query: 482 ENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510
            N     LD      +LK G  ++K  +PIFPR 
Sbjct: 478 -NFGNMRLDDAQRWGQLKAGTRVNKP-EPIFPRI 509


>gi|52078533|ref|YP_077324.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783895|ref|YP_089724.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319648562|ref|ZP_08002776.1| MetS protein [Bacillus sp. BT1B_CT2]
 gi|52001744|gb|AAU21686.1| methionyl-tRNA synthetase MetS [Bacillus licheniformis ATCC 14580]
 gi|52346397|gb|AAU39031.1| MetS [Bacillus licheniformis ATCC 14580]
 gi|317389329|gb|EFV70142.1| MetS protein [Bacillus sp. BT1B_CT2]
          Length = 662

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/521 (42%), Positives = 335/521 (64%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQQT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T +  VD+ + + + +   LDIS DDFIRTTE+RH      +++K+ D GDIY 
Sbjct: 63  AEKENITPQELVDRAAEDIQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + +   V +   G+    +     +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL++YE +PEFI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWID
Sbjct: 183 RLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  G+    D +  K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 243 ALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K +DG I +  G  T  DE + S   + ++   + ++N     
Sbjct: 363 LANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPLSSFSQKTIEAYEQAIENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELK--KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +   VS  ++Y D   PW L   K       +V+Y   E +R  A+LLQ F+ +  
Sbjct: 423 ALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            KIF  L V D + + + S+    +   +  +  +P+FPR 
Sbjct: 483 EKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRL 523


>gi|319654959|ref|ZP_08009033.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393384|gb|EFV74148.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 654

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/512 (42%), Positives = 334/512 (65%), Gaps = 14/512 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+   HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A+  G
Sbjct: 8   FYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRMRGFDVMYLTGTDEHGQKIQEKAEEKG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD+     +++   LDISYDDFIRTT+ RH      ++ ++ ++GDIY G Y G
Sbjct: 68  ITPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKQIVEKIFAQLVEQGDIYLGEYEG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E+YY + ++    DG   +    PV  ++EE YFF++S Y D+LL YYE +P F
Sbjct: 128 WYCTPCESYYTERQL---VDGNCPDCGR-PVHKVKEESYFFKVSKYADRLLQYYEENPSF 183

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P++P++++YVWIDAL+NY+T  GY 
Sbjct: 184 IQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPNNPKHVVYVWIDALSNYITALGYG 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  K+SK
Sbjct: 244 TDDDSKYLNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+
Sbjct: 304 SKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERINFDLANDLGNLLNRT 363

Query: 366 VSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++M+ K +DG+IP+   +  E D+ +L +    + +  E M+      AL+ V  LVS  
Sbjct: 364 IAMVNKYFDGVIPSYKDSNGEFDQQLLQMNRETVSKYEEAMEKMEFSVALSAVWQLVSRT 423

Query: 425 DRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L K    R   ++V+    E +R++A+LLQ F+ +   ++F  L V +E
Sbjct: 424 NKYIDETQPWALAKEEEKREDLASVMAHLAESLRRIAVLLQPFLTRTPKEVFSQLNVNEE 483

Query: 483 NRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
                S +   K G +   T     +PIFPR 
Sbjct: 484 --ALTSWESLEKFGLIPEGTKVLKGEPIFPRL 513


>gi|89101166|ref|ZP_01173999.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           NRRL B-14911]
 gi|89084134|gb|EAR63302.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           NRRL B-14911]
          Length = 653

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/510 (43%), Positives = 331/510 (64%), Gaps = 10/510 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A+  G
Sbjct: 8   FYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQQKAEEKG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT + +VD+     +D+   LDISYDDFIRTT+ RH      ++ ++ ++GDIY G Y G
Sbjct: 68  VTPQEYVDEIVDGIKDLWSKLDISYDDFIRTTQDRHKQVVEKIFARLLEQGDIYLGEYEG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E+Y+ + ++    DG   +    PV  ++EE YFF++S Y D+LL YYE +P F
Sbjct: 128 WYCTPCESYFTERQL---VDGNCPDCGR-PVNKVKEESYFFKVSKYADRLLKYYEENPHF 183

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+I+ F+K GL+DL++SR TFDWG+K+PD+P++++YVWIDAL+NY+T  GY 
Sbjct: 184 IQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPDNPKHVVYVWIDALSNYITALGYG 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  K+SK
Sbjct: 244 TEDDSKYLNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ +I+  G+D+LRY+L+RE+  G DG +  +G  +RVN DLAN +GNL++R+
Sbjct: 304 SKGNVVDPVTLIDRYGLDSLRYYLLREVPFGADGVFTPEGFVERVNFDLANDLGNLLNRT 363

Query: 366 VSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           V+MI K +DG IP   G+  E D+ +L +    + +  E M+      AL+ V  LVS  
Sbjct: 364 VAMIEKYFDGTIPAYQGSEGEFDKQLLDMNKETVAKYEEAMEKMEFSVALSSVWQLVSRT 423

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-AD 481
           ++Y D  +PW L K     +    V++   E +R+  +LL+ F+ +  + IF+ L V  +
Sbjct: 424 NKYIDETQPWVLAKDEARKEELGNVMFHLAESLRRTGVLLKPFLTRTPDGIFNQLNVNTE 483

Query: 482 ENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           E   ++SL+   L P        DPIFPR 
Sbjct: 484 ELTSWESLETFGLIPENTKVVKGDPIFPRL 513


>gi|167042815|gb|ABZ07533.1| putative tRNA binding domain protein [uncultured marine
           microorganism HF4000_ANIW137I15]
          Length = 665

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/518 (43%), Positives = 320/518 (61%), Gaps = 23/518 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y++T I Y N  PHIGHAY  I ADVLARFHRL G  V   TGTDEHGQK+ +AA +
Sbjct: 3   ETFYVTTPIYYVNDYPHIGHAYTTIAADVLARFHRLAGTRVFLLTGTDEHGQKVERAALD 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+    +  + D L I  DDFIRTTE RH      L++++ +KGDIY G Y
Sbjct: 63  RGLTPQGLADRVVGRYHQLWDRLRIEPDDFIRTTEARHRKGVEDLFRRVQEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY   DE+++ + +V  G   +       PV+ + EE YFFR+S YQD+LL + E HP
Sbjct: 123 EGWYCTPDESFWTETQVVDGKCPEC----GRPVERVREESYFFRMSKYQDRLLRHLEEHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FILP  RRNEVI FV+ GL+DLS+SR TF WGI +P    +++YVW DALTNY++  G+
Sbjct: 179 GFILPESRRNEVIRFVEGGLRDLSISRTTFQWGIPVPGGQGHVLYVWFDALTNYISALGF 238

Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            +   G     FWPAD+H+IGKDILRFHA+YWP FL+SA LPLP++VF+HG+   +G+K+
Sbjct: 239 GEKNGGEGYETFWPADVHLIGKDILRFHAVYWPTFLMSAELPLPRRVFAHGWWTVEGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  +++  G DA+RYFL+RE+  G+DG +  + L KR+N+DLAN +GNL+ 
Sbjct: 299 SKSLRNVVEPNRLLDRYGADAVRYFLLREVPFGQDGNFSHEALIKRINSDLANDLGNLLH 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M+ +   G +P      + +  +          +RE +++    R L +V   + +
Sbjct: 359 RTIGMVEQFCGGRLPRAAEVGDLERGLQQAAGATTAVLREELESLEFQRVLKKVWDFIRQ 418

Query: 424 VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           V++Y DA+ PW L K+  +    T LY   E IR L++ L  F+P  A KI   L +A+E
Sbjct: 419 VNKYLDARAPWSLSKSGDEAGVRTTLYTAAEAIRVLSVWLWPFMPDAALKIRSRLGLAEE 478

Query: 483 N--------RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           +        R +  L+  + ++PG        P+FPR 
Sbjct: 479 DPPRSLEEARTWGVLEAGREVQPG-------PPLFPRI 509


>gi|15612616|ref|NP_240919.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|25009402|sp|Q9KGK8|SYM_BACHD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10172665|dbj|BAB03772.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 660

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/521 (42%), Positives = 337/521 (64%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G +V++ TGTDEHGQKI + 
Sbjct: 3   KEQKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYNVMYLTGTDEHGQKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K FVD+     +D+   LDISYDDFIRTTE+RH    + +++++ D+GDIY 
Sbjct: 63  AEAKGLTPKQFVDEIVSGIQDLWKKLDISYDDFIRTTEERHIKVVQQIFEQLLDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQH----NPVQWMEEEGYFFRLSAYQD 174
           G Y GWYS+ DE +Y + ++      ADG     +     +PV+ + E+ YFFR+S Y D
Sbjct: 123 GDYEGWYSIPDETFYTETQLVDKEYDADGNLIGGKSPDSGHPVEKVREQSYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P+FI P  R+NE+I+ F+K GL+DL++SR +F WG+ +P DP++++YVWID
Sbjct: 183 RLLQFYEENPQFIQPESRKNEMINNFIKPGLEDLAVSRTSFTWGVPVPRDPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +       +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 243 ALSNYITALGYGSDQQEKYENYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVPLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG IP+     T  D  ++ +    ++++ + M+      
Sbjct: 363 LANDLGNLLNRTVAMIEKYFDGKIPSYVKDGTPFDADLVELVYSTVKKVEDAMEEMEFSI 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  L+S  ++Y D  +PW L K    R      +Y   E IR +++LLQ F+ K  
Sbjct: 423 ALTAIGQLISRTNKYIDETQPWVLAKDESKREQLGAAMYHLAESIRYVSVLLQPFMTKAP 482

Query: 471 NKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
            KI++ L +      ++SL+   + PG    +   P+FPR 
Sbjct: 483 QKIWEQLGIDSSLTTWESLETFGQIPGNTNVQKGQPLFPRL 523


>gi|135148|sp|P23920|SYM_BACST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|39989|emb|CAA40999.1| methionine--tRNA ligase [Geobacillus stearothermophilus]
          Length = 649

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/516 (43%), Positives = 329/516 (63%), Gaps = 14/516 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  GVT + +VD      +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  QEKGVTPQQYVDDIVAGIQELWRKLDISYDDFIRTTQERHKKIVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++    DG   +    PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQL---VDGNCPDC-GRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVMIIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K + G IP   G  T  D  +      V+++  E M+      AL+ V  L
Sbjct: 358 LHRTVAMIEKYFGGAIPPYRGPKTPFDRDLSETAREVVRQYEEAMERMEFSVALSAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K    R   ++V+    E +R  A+LLQ F+ +   +IF  L 
Sbjct: 418 IGRTNKYIDETQPWVLAKEESKREELASVMAHLAESLRYTAVLLQPFLTRTPERIFTQLG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
           ++D  R  +  D     G +   T     +P+FPR 
Sbjct: 478 ISD--RSLKEWDSLYDFGLIPEGTNVQKGEPLFPRL 511


>gi|315301039|ref|ZP_07872357.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630592|gb|EFR98407.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 664

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/522 (43%), Positives = 341/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVAKIFEQLVEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK   G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDESGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP   G  T  D++++   + V+ +  ++M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFNGEIPAYQGDVTPFDKTLVDFKNSVVLDYEKSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D      L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAXXALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|310830112|ref|YP_003962469.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741846|gb|ADO39506.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 648

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/515 (43%), Positives = 334/515 (64%), Gaps = 10/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+E++  Y++T I YP+   HIGH Y  + AD L RF +L G D  F TGTDEHGQKI K
Sbjct: 2   MEEKKTFYVTTPIYYPSGDLHIGHTYTTVAADTLTRFKKLTGYDAYFLTGTDEHGQKIQK 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT + +VD      +++  +++I+YD FIRTT+  H  T + ++KK+ D+GDIY
Sbjct: 62  AAEEKGVTPQAYVDDVVGRIKELWKLMNINYDQFIRTTDPEHEKTIQQIFKKLYDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ + ++    DG   +    PV+   EE YFF++S Y D+LL Y 
Sbjct: 122 KGKYEGWYCTPCESFWTESQL---VDGNCPDCGR-PVEKASEEAYFFKMSKYADRLLKYI 177

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HP+FI P  R+NE+I+ F+K GL+DL +SR +F WG+ +  DP +++YVWIDAL NY+
Sbjct: 178 EDHPDFIQPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVTFDPGHVVYVWIDALPNYI 237

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GYL++      K+WPA++H++GKDI+RFH IYWP  L++ +LPLP+ V+ HG+IL K
Sbjct: 238 SALGYLNDKPQLMDKYWPANVHLVGKDIIRFHTIYWPIILMALDLPLPEHVYGHGWILLK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS+GNV+DP+E+ E+ GVDALRY ++RE+  G DG Y++D L   +N+DLAN +G
Sbjct: 298 GGKMSKSVGNVVDPVELAEKYGVDALRYHVLREMTYGADGIYNEDLLVSHINSDLANDLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+V+M +K +DG+IP      + D  ++++       + + M      RAL  V  
Sbjct: 358 NLLSRTVAMTVKYFDGVIPAERESGDFDAELIALAEETPGVVEDYMNKLDFSRALEAVWK 417

Query: 420 LVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           LVS  ++Y D  +PW L K +P+   R + V+Y   E +R +++L+ + +P    KI D 
Sbjct: 418 LVSRTNKYIDETQPWVLIK-DPEKKARLAMVMYNLTESLRIISVLVSSAMPDTGVKIADE 476

Query: 477 LFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
           L V +E R ++S+    K P  +  +  +PIFPR 
Sbjct: 477 LKVPEELRTWESIQSFGKYPDGIQVERCEPIFPRI 511


>gi|260584776|ref|ZP_05852521.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157433|gb|EEW92504.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 670

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/523 (44%), Positives = 337/523 (64%), Gaps = 15/523 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y++T I YP+ Q HIGHAY  + +D + R+ +L G D  F TGTDEHGQKI + 
Sbjct: 3   EDKKTFYLTTPIYYPSGQLHIGHAYTTVASDAMIRYKKLQGYDTYFLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ AGV+   FVD      +D+   LD+SYDDFIRTT+ RH  + + +++K+ D GDIY 
Sbjct: 63  AQEAGVSEIEFVDNIIFGIQDLWKKLDVSYDDFIRTTQPRHKKSVQKIFQKLMDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+ ADG+         + VQ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTESQLVEVYRDADGKMIGGVAPSGHEVQLVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YYE HPEFI P  R+NE+I+ F+K GL+DL++SR +FDWGI +P+DP++++YVWIDA
Sbjct: 183 LLQYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIPVPNDPKHVIYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    ++WPAD+H IGK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 243 LSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIMLMALDLPLPKKIFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+DALRY+L+RE+  G DG +  +   +R+N DL
Sbjct: 303 WLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLREVPFGSDGIFTPESFVERINYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IPT  A   S D  ++     +++E+   M+      A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGTIPTYSAPVSSFDHELVEASKVMIEEVEAAMEEMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           L+ +   VS  ++Y D   PW   K      + A T+ Y+  E +R +A+ LQ F+ +  
Sbjct: 423 LSAIWKFVSRTNKYIDETTPWAAVKDEARQEELARTMSYLA-ESLRIIAVALQPFLTQTP 481

Query: 471 NKIFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +I   L + DE  R + SL     +  G  + +   PIFPR 
Sbjct: 482 GEILAQLGIHDEALRDYPSLHTFGVIPAGTTVVEKGQPIFPRL 524


>gi|313895444|ref|ZP_07829001.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976339|gb|EFR41797.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 514

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/515 (43%), Positives = 331/515 (64%), Gaps = 11/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+A+ HIGHAY   +AD +ARF RL G DV F TG+DEHGQKI +
Sbjct: 1   MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGYDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT + +VD+    F+++  +L ISYDDFIRT+E+RHH+  + ++++I D+GDIY
Sbjct: 61  AAEKEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   E+    +G   +  H PVQ + EE YFFR+S Y D++L+Y 
Sbjct: 121 KGEYKGLYCTPCESYWT--ELQLDENGNCPDC-HRPVQEVSEEAYFFRMSKYADRVLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HP+FI P+ RRNE+ISF++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 KEHPDFIQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+ + + +  K+WP D+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYMHDKE-TFHKYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DPI +IEE G DA+RYFL+REI  G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAIRYFLLREITLGQDGNISRDALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T  D S+  + +  ++     M+   +  A+  V + 
Sbjct: 357 LLHRTLSMAKKYRGGVIVKGTGETAFDASLEEIAAETVKMYTAQMEAMELSPAIRTVWAF 416

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D   PW L K      +  +VLY  VE +   +IL+  F+P  A +I   L 
Sbjct: 417 IARTNKYIDETAPWTLAKDEAKAGQLDSVLYHLVEALHITSILIAPFMPVTARRIHAQLG 476

Query: 479 VADENRCFQSLD----QRLKPGFMLHKTFDPIFPR 509
            AD+    Q  D     R+  G  +  T + +FPR
Sbjct: 477 FADDFDAVQLADIAHWGRVAEGHTV-GTAEQLFPR 510


>gi|259047680|ref|ZP_05738081.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035871|gb|EEW37126.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 670

 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/523 (43%), Positives = 334/523 (63%), Gaps = 15/523 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y++T I YP+   HIGHAY  + +D + R+ +L G D  F TGTDEHGQKI + 
Sbjct: 3   EDKKTFYLTTPIYYPSGNLHIGHAYTTVASDAMVRYKKLQGFDTYFLTGTDEHGQKIQEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGV+   FVD+     +D+   LDISYDDFIRTT+ RH    + +++K+ D GDIY 
Sbjct: 63  AKEAGVSEIEFVDKIIFGIQDLWKELDISYDDFIRTTQPRHTKAVQKIFQKLVDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+ A+G          + V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLVEVYRDAEGNMIGGVAPSGHEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YYE HP+FI P  R+NE+I+ F+K GL+DL++SR +FDWGI +P+DP++++YVWIDA
Sbjct: 183 LLQYYEEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIPVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    ++WPAD+H IGK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 243 LSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIMLMALDLPLPKKIFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+DALRY+L+RE+  G DG +  +   +R+N DL
Sbjct: 303 WLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLREVPFGSDGIFTPESFVERINYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   A   S D+ ++     ++ E+ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGTIPAYTAPVSSFDQELVDASKAMIVEVEEAMENMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           LA +   VS  ++Y D   PW   K      + A T+ Y+  E +R +A+ LQ F+ +  
Sbjct: 423 LAAIWKFVSRTNKYIDETTPWAAVKDEARQEELARTMNYLA-ESLRIIAVALQPFLTQTP 481

Query: 471 NKIFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +I   L + D     + SL     +  G  + +   PIFPR 
Sbjct: 482 GEILAQLGITDSALMDYPSLHTFGVIPEGTKVVEKGQPIFPRL 524


>gi|309390254|gb|ADO78134.1| methionyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 653

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 217/514 (42%), Positives = 336/514 (65%), Gaps = 9/514 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+ + HIGHAY  + AD +AR+ ++ G D +F TG+DEHGQKI + AQ
Sbjct: 3   KDTYYVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMRGFDTMFLTGSDEHGQKIERKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   K +VDQ    F+++ D LDI YD FIRTTE RH    + +++K+ D+GDIYKG 
Sbjct: 63  AAGKEAKEYVDQIVATFKNLWDKLDIEYDYFIRTTEARHEKVVQQIFEKLYDQGDIYKGK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    EA++ + ++ +  + +     H  V+W+EEE YFF++S Y D+LL + + H
Sbjct: 123 YEGWYCTPCEAFWTERQLEEAKEEKVCPDCHREVEWVEEESYFFKMSKYADRLLEHIKDH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE+I+F+++GL DLS+SR TF+WGI +P D  +++YVWIDAL+NYLT  G
Sbjct: 183 PEFIEPESRRNEMINFIENGLDDLSVSRTTFEWGIPVPIDDDHVIYVWIDALSNYLTAIG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + +  + K+WPADLH++GKDILRFH I WP  +++ +L LPK+VF HG++L +  K+
Sbjct: 243 YQTDQENFE-KYWPADLHLVGKDILRFHTIIWPIIIMALDLELPKQVFGHGWLLSETGKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+ +I++ G DA+RY+L+RE+A G DG Y  + L +R+N+DLAN +GNL++
Sbjct: 302 SKSKGNVVDPVVLIDDFGKDAIRYYLLREVAFGTDGKYSTESLIQRINSDLANDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+VSM+ + +D  IP      + D+ ++ + ++  +E+   M+      AL ++ + V  
Sbjct: 362 RTVSMVDQYFDSEIPKVAEKADLDQELIDLAAQTKKEVEIEMEKLKYTVALEKIWNFVRR 421

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP----KLANKIFDIL 477
            ++Y D   PW L K     DR  TVLY  +E +R +A++L+ F+     K+  ++  + 
Sbjct: 422 TNKYIDQTSPWLLAKEPAKRDRLKTVLYNLLESLRIIAVMLKPFLTEAPFKMGQQLGQLE 481

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + D +    +    LK G  + K  +P+FPR +
Sbjct: 482 AIEDADWEAATWGS-LKTGVKV-KNGEPMFPRIV 513


>gi|154684557|ref|YP_001419718.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350408|gb|ABS72487.1| MetS [Bacillus amyloliquefaciens FZB42]
          Length = 663

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/516 (42%), Positives = 330/516 (63%), Gaps = 12/516 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+   
Sbjct: 8   FYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQKAEEEN 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD+     + +   LDIS+DDFIRTTE RH +    +++K+ D GDIY   Y G
Sbjct: 68  ITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYLDEYEG 127

Query: 127 WYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQDKLLSY 179
           WYS+ DE +Y + +   V +   G+    +     +PV+ ++EE YFFR+S Y D+LL +
Sbjct: 128 WYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYADRLLKF 187

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+P +P++++YVWIDAL NY
Sbjct: 188 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWIDALFNY 247

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+HG++L 
Sbjct: 248 ITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAHGWLLM 307

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N DLAN +
Sbjct: 308 KDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYDLANDL 367

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K +DG I +  G  T+ D  + SV    ++   + M+N     AL+ +
Sbjct: 368 GNLLNRTVAMIQKYFDGEIGSYEGNVTDFDSELSSVAGETVKAYEKAMENMEFSVALSTL 427

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+S  ++Y D   PW L K         +V+Y   E +R  A+LLQ F+ +   K+F 
Sbjct: 428 WQLISRTNKYIDETAPWVLAKDQEKEKELRSVMYHLAESLRISAVLLQPFLTQTPEKMFA 487

Query: 476 ILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L V D++ + + S+    +      K  +P+FPR 
Sbjct: 488 QLGVEDQSLKAWDSIQTFGQLKNAKVKKGEPLFPRL 523


>gi|225181535|ref|ZP_03734977.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167783|gb|EEG76592.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 652

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/513 (43%), Positives = 330/513 (64%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G    F TGTDEHGQKI + A
Sbjct: 2   QKKSFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGHQAYFLTGTDEHGQKIERRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG   + FVD+     + +  VLDISYDDFIRTTE+RH D+ + ++ K  ++GDIYK 
Sbjct: 62  QEAGKEPQEFVDEIVDWIKKLWTVLDISYDDFIRTTEQRHKDSVQKIFTKFYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    EA++ + +V +G           PV+ + EE YFF++S Y D+L+ + E+
Sbjct: 122 KYEGWYCTPCEAFWTERQVEEGNCPDC----KRPVELVAEESYFFKMSKYADRLIEHIEN 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+ F+K GL+DL +SR TF WGI +P DP +++YVW+DAL+NY+T 
Sbjct: 178 NPEFIQPASRKNEMINNFLKPGLEDLCVSRTTFKWGIPVPFDPDHVIYVWLDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL   D     FWPAD+ +IGK+I+RFH IYWP FL++  L LPK+VF HG++L +  
Sbjct: 238 LGYLSEDDSKMKAFWPADVQLIGKEIVRFHTIYWPIFLMALGLELPKQVFGHGWLLLEEG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP  ++E  G DA+RYFL+REI  G DG + ++ L +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVIDPEVLVERYGSDAIRYFLLREIPFGADGHFSEEALIQRLNFDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+++M+ K Y G +PTP      DE + S+   + Q++ E M   L   AL+++   +
Sbjct: 358 LNRTLAMLNKYYQGKVPTPSLDEAIDEELKSMALDLPQKMTERMDQLLFSNALSELWKFI 417

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  ++Y D   PW L K+ N  R +TV+Y  +E IR +++LL  F+P+   +I+  L +A
Sbjct: 418 ARANKYIDETAPWTLAKEGNQQRLATVMYNLLESIRIVSVLLLPFMPRTPERIWQQLGIA 477

Query: 481 DENR--CFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
            E +   + S+ +    P     K  + +FPR 
Sbjct: 478 HEGKIHTWDSIQEFGALPAGAQTKAAEVLFPRL 510


>gi|310642692|ref|YP_003947450.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Paenibacillus
           polymyxa SC2]
 gi|309247642|gb|ADO57209.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus
           polymyxa SC2]
          Length = 672

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/524 (43%), Positives = 337/524 (64%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIGHAY  +  D +AR+ RL G +V + TGTDEHGQKI +
Sbjct: 1   MSSENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +D+   LDIS DDFIRTTE+RH    + ++ ++  +GDIY
Sbjct: 61  KASAAGKTPQRFVDDIVAGIQDLWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173
           KG Y GWYS+ DE YY + +   V K A+G     +     +PV+ ++EE YFFR+S Y 
Sbjct: 121 KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVTGGKSPDSGHPVELVKEESYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P+FI P  R+ E+I+ F+K GL+DL++SR TFDWG+K+  DP++++YVWI
Sbjct: 181 DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  +      KFWPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+DP+ +I+  G+D LRY+L+RE+  G DG +  +    RVN+
Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+M+ K +DG +P   A  T  D +++ + +    ++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTSFDAALVDMATSTYSKVEEAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  +   +S  ++Y D  +PW L K    R+  ++V+   VE +R  +ILLQ F+ + 
Sbjct: 421 VALTAISQFISRSNKYIDETQPWNLAKDEEKRSELASVMVHLVESLRIASILLQPFLTRA 480

Query: 470 ANKIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            ++I++ L +   E   + S  Q  R+  G  L K  +PIFPR 
Sbjct: 481 PHQIWEQLGIRQGELTTWDSGKQFGRIPEGTQLVKG-NPIFPRL 523


>gi|212637881|ref|YP_002314401.1| methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559361|gb|ACJ32416.1| Methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 656

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 218/515 (42%), Positives = 330/515 (64%), Gaps = 14/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A+
Sbjct: 10  KKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT + +VD+     +++   LDISYDDFIRTTE+RH      ++ ++ ++GDIY   
Sbjct: 70  EKGVTPQQYVDEIVAGIKELWKKLDISYDDFIRTTEQRHKQVVEKIFARLLEQGDIYLDE 129

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E++Y + ++ +G           PV+ ++E+ YFFR+S Y D+LL++YE +
Sbjct: 130 YEGWYCTPCESFYTERQLVEGNCPDC----GRPVEKVKEQSYFFRMSKYVDRLLAFYEEN 185

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGI +P DP++++YVWIDAL+NY+T  
Sbjct: 186 PQFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIPVPGDPKHVIYVWIDALSNYITAL 245

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  K
Sbjct: 246 GYGTENDEKYKTYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGK 305

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL+
Sbjct: 306 MSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLL 365

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R+V+MI K + G +P   G  T  DE ++ +    +++  E M+     +AL  V  L+
Sbjct: 366 NRTVAMIEKYFAGRVPVYSGTHTSFDEQLVQMAYDTVRQYEEAMEQMQFSQALTAVWQLI 425

Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D  +PW L K    R   ++V+    E +R +A+LLQ F+     ++F  L +
Sbjct: 426 SRTNKYIDETQPWVLAKDEATREQLASVMSHLAESLRYVAVLLQPFLTATPKRMFAQLGI 485

Query: 480 ADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            DE     S D     G   H+       P+FPR 
Sbjct: 486 QDEK--LMSWDSLQTFGASQHERMVEKGAPLFPRL 518


>gi|317126779|ref|YP_004093061.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471727|gb|ADU28330.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 656

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 217/513 (42%), Positives = 338/513 (65%), Gaps = 10/513 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV+F TGTDEHGQKI + A+
Sbjct: 5   RKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVMFLTGTDEHGQKIERKAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + GV+ + FVD   +  + +   LDISYDDFIRTTE+RH    + ++ ++  +GDIY   
Sbjct: 65  DKGVSPQQFVDDIVKTIKSLWSKLDISYDDFIRTTEERHKKVVQKIFDQLLQQGDIYLDQ 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ D   Y+  DG+  +    PV+ ++EE YFFR+S Y D+LL YYE +
Sbjct: 125 YEGLYCTPCESFFTD---YQAKDGKCPDCSR-PVEKVQEESYFFRMSKYADRLLKYYEEN 180

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+I+ F+K GL+DL++SR +FDWGI +  +P++++YVWIDAL+NY+T  
Sbjct: 181 PDFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGINVKSNPEHVVYVWIDALSNYITAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG++L K  K
Sbjct: 241 GYGSDDETLYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +IE  G+DALRY+L+RE+  G DG +  +G   RVN DLAN +GNL+
Sbjct: 301 MSKSKGNVVDPVPLIERYGLDALRYYLLREVPFGSDGTFTPEGFVDRVNYDLANDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R+V+MI K +DG +P      T  DES++   +  ++++ + M++     AL  +  LV
Sbjct: 361 NRTVAMINKYFDGEMPKYIKNATSYDESLVDHVNATVKKVEDAMEDMEFSVALTAIWQLV 420

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D  +PW + +  T  ++  +V+Y   E +R ++IL+Q F+ +   KI++ L +
Sbjct: 421 SRTNKYIDETQPWIIARDETAKEQLGSVMYHLAESLRYISILIQPFLTEAPKKIWEQLGI 480

Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            ++   + +L    + + G  +    +P+FPR 
Sbjct: 481 TEDQTVWSTLQDFGKTESGTKVVTKGEPLFPRL 513


>gi|330814121|ref|YP_004358360.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487216|gb|AEA81621.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 481

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 218/487 (44%), Positives = 314/487 (64%), Gaps = 15/487 (3%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GHAY  I AD +AR+ RL+G DV F TGTDEHGQKI K+A    ++  VF ++ S+ F 
Sbjct: 1   MGHAYSSISADFIARYKRLEGYDVKFVTGTDEHGQKIQKSADKRKLSPNVFCNEISKVFL 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           D+   L++S  DFIRTTE RHH T + LWK + +K  IY   YSGWYS+ DEA+Y + E+
Sbjct: 61  DLTKTLNLSNTDFIRTTEDRHHKTVQKLWKILEEKKFIYLSKYSGWYSVSDEAFYTESEI 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
            +  + +   A  + V+W+EEE YFF+LS +Q+ L+ +YE +PEFI P  RRNEV+SFVK
Sbjct: 121 IEKDNIKLSVASGSAVEWVEEESYFFKLSQFQNLLIKHYEDNPEFIQPSSRRNEVMSFVK 180

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
            GL DLS+SR +F WGI +P+   +I+YVW+DALTNYLT T Y D         WPAD+H
Sbjct: 181 GGLNDLSISRNSFKWGISVPNSKDHIIYVWLDALTNYLTATNYFDENSS-----WPADVH 235

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +IGKDILRFHA+YWPAFLL+A +PLPK +F HG+IL   EK+SKS GN++DPIEV+ E G
Sbjct: 236 IIGKDILRFHAVYWPAFLLAAEIPLPKTIFGHGWILSGDEKMSKSKGNILDPIEVVNEFG 295

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           +D +RY+L++E+  G DG  + D LK  +N+DLAN IGNL  R   +I K +   +P P 
Sbjct: 296 LDEIRYYLMKEVMYGLDGNINIDNLKNCINSDLANNIGNLSQRIFVLINKYFSCKVPDPK 355

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D+  +  C   ++ +R++M +  IH  + +VIS  S+++++ + ++PW   K + 
Sbjct: 356 PLLKDDQKFMD-CP--VEGLRKSMDSFEIHNYIREVISYSSKINKFVNDEEPWTKAKNSD 412

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK------- 494
            R  T+LY+ +  ++ + ILL   +P  +      L V  +N   + +++ L        
Sbjct: 413 PRVGTILYIALNALKNIFILLHPVMPSKSEYYLSCLNVDTKNISLELINKNLPINVELKM 472

Query: 495 PGFMLHK 501
           PG M  K
Sbjct: 473 PGLMFKK 479


>gi|226309673|ref|YP_002769567.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226092621|dbj|BAH41063.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 675

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/475 (46%), Positives = 317/475 (66%), Gaps = 4/475 (0%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+ + HIG+AY  I  D LAR+ RL G DV + TGTDEHGQK+ + A   G 
Sbjct: 6   YITTPIYYPSNKLHIGNAYTTIACDALARYKRLRGYDVYYLTGTDEHGQKLQERAAEEGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F+D      +D+ + LDISYDDFIRTTE RH +  + +++++ D+GDIY G Y G+
Sbjct: 66  QPLEFIDPIVDWVKDLWEKLDISYDDFIRTTEPRHKEVVQKVFQRLLDQGDIYLGEYEGF 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y + DEA++ + +  K  +G         V+ ++E+ YFFR+S YQD+LL++ E++PEFI
Sbjct: 126 YCVPDEAFWTETQC-KTDNGYICPDCGREVKKVKEKNYFFRMSKYQDRLLAHIEANPEFI 184

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  RRNE+++ F+K GL+DLS+SR TFDWGIK+P DP++++YVWIDALTNY++  GYL 
Sbjct: 185 QPESRRNEMVNNFLKPGLQDLSVSRSTFDWGIKVPTDPEHVIYVWIDALTNYISALGYLS 244

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D     FWPA++H++GKDILRFH IYWP  L++ ++PLPK++F HG++L    K+SKS
Sbjct: 245 EDDSKYRNFWPANVHMVGKDILRFHTIYWPILLMALDIPLPKQIFGHGWLLMPDGKMSKS 304

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVIDP  +I+  G D +RYFL+REI  G+DG +  +   +R+N DLAN IGNL+SR+ 
Sbjct: 305 KGNVIDPKVLIDRYGSDGVRYFLLREINFGQDGIFTPESFVQRLNYDLANDIGNLLSRTA 364

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG++P P    E D+S++ +  +    + E+M+      ALA +  LV   ++
Sbjct: 365 TMIEKYFDGIVPAPQDAGEPDDSLIGLAMKTKALVEEHMEEMRFSNALAHIWELVGRTNK 424

Query: 427 YFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           Y D   PW L K+     R +TV+Y  VE IR  ++L+Q F+ K   KI+D L +
Sbjct: 425 YIDETMPWNLAKSEETKGRLATVMYNLVESIRISSVLIQPFMTKAPAKIWDQLGI 479


>gi|205372010|ref|ZP_03224828.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Bacillus
           coahuilensis m4-4]
          Length = 652

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/518 (42%), Positives = 339/518 (65%), Gaps = 12/518 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E+    YI+T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI 
Sbjct: 1   MQEKLNTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGFDVMYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+   VT   +VD+  +  +D+ + LDISYDD+IRTTE RH      ++ ++ ++GDI
Sbjct: 61  RKAEEQNVTPIEYVDEIVKGVKDLWEKLDISYDDYIRTTESRHKQVVEKIFAQLVEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y   Y GWY    E+++ + ++    DG+  +     V+ ++EE YFF++S Y D+LL Y
Sbjct: 121 YLDQYEGWYCTPCESFFTERQL---VDGKCPDCGRE-VEKVKEESYFFKVSKYADRLLQY 176

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P +P++++YVWIDAL+NY
Sbjct: 177 YEENPGFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GY    D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 237 ISALGYGSEDDHKYVNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+D+LRY+L+RE+  G DG +  +G  +R+N DLAN +
Sbjct: 297 KDGKMSKSKGNVVDPVTLIDRYGLDSLRYYLLREVPFGADGVFTPEGFVERINFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+M+ K +DG IP+   +  E    ++ V    ++   E M+N     AL +V
Sbjct: 357 GNLLNRTVAMMNKYFDGEIPSYSESKNEFSTQLVKVNHETVKGYEEAMENMEFSVALTKV 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+S  ++Y D   PW L K     +  S V+Y   E +R+ A+LL+ F+ K   KIF+
Sbjct: 417 WQLISRTNKYIDETSPWALAKEEERKEELSEVMYHLAESLRRAAVLLKPFLTKTPGKIFE 476

Query: 476 ILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            L V DE+ + ++S+++   +  G  + K  +PIFPR 
Sbjct: 477 QLGVTDESLQSWESIERFDSIPSGTKVVKKGEPIFPRL 514


>gi|189425008|ref|YP_001952185.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421267|gb|ACD95665.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 508

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/508 (43%), Positives = 329/508 (64%), Gaps = 8/508 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ R+ G DV F TG+DEHGQK+ KAAQ
Sbjct: 2   KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRMKGFDVFFLTGSDEHGQKVEKAAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T     D+  + F+ + + L IS++DFIRTT++RH      ++K++ ++GDIY G 
Sbjct: 62  TNGETPLELADRVVKRFQALWEKLGISHNDFIRTTQERHKQGVTHIFKQLMEQGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + +V    DG+  +  + PV+ ++EE YFF++SAY +KLL++ E++
Sbjct: 122 YEDWYCTPCETFWTETQV---EDGKCPDC-NRPVEKLKEESYFFKMSAYGEKLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISFVK GL+DLS+SR +F WGI +P + ++++YVW DALTNY++  G
Sbjct: 178 PDFIQPKTRRNEIISFVKEGLRDLSVSRTSFSWGIPVPGNERHVIYVWFDALTNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  N DG+  ++WPAD H+IGKDILRFH +YWP FL++A LP+P+KVF+HG+   +G+K+
Sbjct: 238 Y-PNADGNYGRYWPADAHLIGKDILRFHTVYWPTFLMAAGLPIPQKVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  +I++ GVD +RYFL+RE+  G DG +    L  R+N+DLAN +GNL+S
Sbjct: 297 SKSLQNVVEPNMLIDKYGVDVVRYFLLREVPFGLDGDFSHGSLINRINSDLANDLGNLLS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M++K +DG++P PG  +E D ++ +    +L  +   M      +AL  +  ++S 
Sbjct: 357 RSTAMLVKYFDGILPAPGPLSELDATLKTKAEAMLAAVDNCMDELAFSKALQSIWDVISA 416

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K    R   +TV+Y  +E  R +  L+  F+P+ A K    L    
Sbjct: 417 GNKYIDETAPWGLAKDPAKREQLATVMYCLLEAQRLVHSLVAPFMPQTARKALACLGWQK 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           E      +  +L PG ++ K    +FPR
Sbjct: 477 EATEEDLVWGKLAPGTIIEKA-AALFPR 503


>gi|308069627|ref|YP_003871232.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305858906|gb|ADM70694.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 672

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/524 (43%), Positives = 336/524 (64%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIGHAY  +  D +AR+ RL G +V + TGTDEHGQKI +
Sbjct: 1   MSNENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +++   LDIS DDFIRTTE+RH    + ++ ++  +GDIY
Sbjct: 61  KASAAGKTPQRFVDDIVAGIQELWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173
           KG Y GWYS+ DE YY + +   V K A+G     +     +PV+ ++EE YFFR+S Y 
Sbjct: 121 KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVAGGKSPDSGHPVELVKEECYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P+FI P  R+ E+I+ F+K GL+DL++SR TFDWGIK+  DP++++YVWI
Sbjct: 181 DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGIKVKGDPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  +      KFWPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+DP+ +I+  G+D LRY+L+RE+  G DG +  +    RVN+
Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+M+ K +DG +P   A  T  D ++  + +    ++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTAFDGALEDMATSTYSKVEEAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  +   +S  ++Y D  +PW L K    R   S+V+   VE +R  +ILLQ F+ + 
Sbjct: 421 VALTAISQFISRSNKYIDETQPWNLAKDEAKRRELSSVMLHLVESLRIASILLQPFLTRA 480

Query: 470 ANKIFDILFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +KI++ L ++  E   + S  Q  R+  G  L K  +PIFPR 
Sbjct: 481 PHKIWEQLGISQGELTTWDSGKQFGRIPEGTQLVKG-NPIFPRL 523


>gi|89892874|ref|YP_516361.1| hypothetical protein DSY0128 [Desulfitobacterium hafniense Y51]
 gi|89332322|dbj|BAE81917.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 647

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/512 (44%), Positives = 330/512 (64%), Gaps = 14/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YPNA PHIG AY  + AD  AR+HRL G DV F TGTDE+ QKI + A++ 
Sbjct: 2   KYYITTPIFYPNASPHIGTAYTTVAADAFARYHRLKGHDVYFLTGTDENAQKIVRTAESQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +VD     F+ + + LDISYDDFIRTTE+RHH+  + ++ K+ ++GDIYK  Y 
Sbjct: 62  GMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYKSEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           GWY    E ++ ++++    DG+  N      V+ ++EE YFF+LS YQD LL + + HP
Sbjct: 122 GWYCTPCETFWTENKLI---DGKCPNPDCGRDVELLKEESYFFKLSKYQDALLRHIKDHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+I F++ GL+DL +SR TF WGI++P +P++++YVW+DAL NY++  GY
Sbjct: 179 DFIQPASRRNEMIKFIEGGLEDLCVSRTTFQWGIQVPFNPKHVVYVWLDALINYISALGY 238

Query: 245 LDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
              PDG    ++WPA++H++GKDI+RFHA+ WP  L++ ++PLPK V+ HG+ L K G K
Sbjct: 239 ---PDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGHGWYLSKEGGK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKS GNV D  ++I   G DA+RYFL+RE+  G DG Y +D L +R+N+DLAN +GN V
Sbjct: 296 ISKSRGNVQDSFKLIRRYGSDAIRYFLLREMQVGTDGAYSEDSLVERLNSDLANDLGNFV 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS++MI+K   G+IP  G  TE +  + ++   V+ ++ E ++      AL  +  LVS
Sbjct: 356 SRSLAMIVKYRGGVIPKAGEPTELEAELRALGQEVVAKVEERLEAHDPAGALENLWRLVS 415

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K     +R  TVL+   E IR L IL   F+PKL  K+F    ++
Sbjct: 416 RMNKYVDETAPWTLAKQEGQQERLDTVLHTFAEAIRVLGILCAPFMPKLTGKMFRQCGIS 475

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           DE   +++  +   L  G  + +  + +FPR 
Sbjct: 476 DELLAWEAAKEWDVLGEGIQVQRG-EALFPRI 506


>gi|260893945|ref|YP_003240042.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260866086|gb|ACX53192.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 512

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/513 (44%), Positives = 334/513 (65%), Gaps = 12/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI+T I YP+ + HIGHAY  + AD +ARF R++G DV F TG DEHGQKI + A+
Sbjct: 2   RGKFYITTPIYYPSDRLHIGHAYTTVAADTVARFKRMEGYDVFFLTGADEHGQKIERTAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G   + +VD+   +F+++   L+ISYDDFIRTTE RH    + +++K+ ++GDIYK  
Sbjct: 62  SKGKDPQSYVDEIVASFKELWARLEISYDDFIRTTEPRHKVVAQKIFQKLYEQGDIYKST 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E ++   ++    DG+  +    PV+ ++EE YFFRLSAY D+LL+Y E H
Sbjct: 122 YQGWYCTPCETFWTARQL---VDGKCPDCG-RPVELLQEESYFFRLSAYADRLLAYIEEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEVISF++ GL+DL +SR TF WGI +P DP++++YVWIDALTNYL+  G
Sbjct: 178 PDFIQPPARRNEVISFIRGGLEDLCVSRTTFSWGIPVPFDPRHVIYVWIDALTNYLSALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    ++WPAD+H++GKDI+RFHAI WP+ L++  L LP++V  HG++L +G K+
Sbjct: 238 YGTEDDERFKRYWPADVHLVGKDIVRFHAIIWPSILMALGLELPRRVVGHGWLLVEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVIDP  +I++ GVDA+RY+L+RE+A G DG Y++  L KR+N DLAN +GNL+ 
Sbjct: 298 SKSKGNVIDPHYLIDKYGVDAVRYYLLRELAFGADGEYEEKNLVKRLNYDLANDLGNLLY 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++++ K  +G+I  P      D+ ++++       + E +    +  ALA +  LV  
Sbjct: 358 RTLTVLEKYGEGVIGEPVEKEGPDDELIALAISTPARVAELVDQLQLSEALAAIWQLVGR 417

Query: 424 VDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++Y D   PW L K +P R     TV+Y  +EV R + +LL  F+P    +++  L +A
Sbjct: 418 ANKYLDETAPWRLGK-DPGRKKRFDTVIYNVLEVYRFITVLLGPFMPGFPPRVWPQLGIA 476

Query: 481 D--ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
                  F+SL   +L PG  + K  +P+FPR 
Sbjct: 477 SLPALHTFESLKWGQLPPGIRVAKG-EPLFPRL 508


>gi|320529744|ref|ZP_08030822.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137983|gb|EFW29887.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 514

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/492 (44%), Positives = 320/492 (65%), Gaps = 6/492 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+A+ HIGHAY   +AD +ARF RL G DV F TG+DEHGQKI +
Sbjct: 1   MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGYDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT + +VD+    F+++  +L ISYDDFIRT+E+RHH+  + ++++I D+GDIY
Sbjct: 61  AAEKEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   E+    +G   +  H PVQ + EE YFFR+S Y D++L+Y 
Sbjct: 121 KGEYKGLYCTPCESYWT--ELQLDENGNCPDC-HRPVQEVSEEAYFFRMSKYADRVLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HP+FI P+ RRNE+ISF++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 KEHPDFIQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+ + +  + K+WP D+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYMHDKETFR-KYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DPI +IEE G DA+RYFL+REI  G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAIRYFLLREITLGQDGNISRDALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T  D S+  + +  ++     M+   +  A+  V + 
Sbjct: 357 LLHRTLSMAKKYRAGVIVKGTGETAFDASLEEMAAETVKMYTAQMEAMELSPAIRTVWAF 416

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D   PW L K      +   VLY  VE +   +IL+  F+P  A +I   L 
Sbjct: 417 IARTNKYIDETAPWTLAKDEAKAGQLDYVLYHLVEALHITSILIAPFMPVTARRIHAQLG 476

Query: 479 VADENRCFQSLD 490
            AD+    Q  D
Sbjct: 477 FADDFDAVQLAD 488


>gi|325294665|ref|YP_004281179.1| methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065113|gb|ADY73120.1| Methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 525

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/510 (45%), Positives = 323/510 (63%), Gaps = 10/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++T I Y N  PH+GHAY    AD++ARF+R  G DV F TGTDEHGQKI +AA+ 
Sbjct: 2   EKFYVTTPIYYVNDIPHLGHAYTTTAADIVARFNRFLGRDVFFLTGTDEHGQKIQQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FVD     F+++ + L+ISYD FIRTT+  H    + ++KK  + GDIY G Y
Sbjct: 62  RGMTPKEFVDTLVPKFKELWEKLNISYDHFIRTTDPEHIKAVQYIFKKCYENGDIYLGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E Y+ + E+    +G+Y       V  ++EE YFFRLS YQD+LL +YE +P
Sbjct: 122 EGWYCIPCETYHTEKEL---LEGKYCPMCKREVVRVKEESYFFRLSKYQDRLLEFYEENP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVI+FVK GLKDLS+SR +F WGI +P + ++++YVW DALTNYLT  GY
Sbjct: 179 DFIAPEFRRNEVINFVKQGLKDLSISRTSFTWGIPVPINEKHVIYVWFDALTNYLTAVGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            DN D     +WPADLH++GKDILRFH +YWPAFL+SA L +PK+VF+HG+    GEK+S
Sbjct: 239 PDNMDKVN-HYWPADLHLVGKDILRFHTVYWPAFLMSAGLEIPKRVFAHGWWTVNGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV +P E+IE+ GVD +R+FL RE++ G DG +  + L  R+N +LAN +GNL +R
Sbjct: 298 KSKGNVANPFEIIEKFGVDQVRFFLFREVSFGLDGDFTYEKLVGRINGELANDLGNLFNR 357

Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           ++SM+ K    ++P P GA  E D  + +        ++E +    + RAL ++   VS 
Sbjct: 358 TLSMLKKYRKSIVPEPKGAEDELDVELKNKAIATAARLKELIPKAELTRALEEIWQFVSF 417

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+ Y D + PW L K   +    VLY  VE +R +   +  ++P  A K+ ++L +  + 
Sbjct: 418 VNFYIDRRAPWSLNKEGKEELDRVLYNMVEALRFITAFVYPYMPSSAEKMAEMLKLGKKA 477

Query: 484 RCFQSLDQR----LKPGFMLHKTFDPIFPR 509
              +  +      +KPG  L K    +FPR
Sbjct: 478 ESLRISEFEDWGGIKPGTELEKG-GILFPR 506


>gi|219666137|ref|YP_002456572.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536397|gb|ACL18136.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 647

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/512 (44%), Positives = 329/512 (64%), Gaps = 14/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YPNA PHIG AY  + AD  AR+HRL G DV F TGTDE+ QKI + A++ 
Sbjct: 2   KYYITTPIFYPNASPHIGTAYTTVAADAFARYHRLKGHDVYFLTGTDENAQKIVRTAESQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +VD     F+ + + LDISYDDFIRTTE+RHH+  + ++ K+ ++GDIYK  Y 
Sbjct: 62  GMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYKSEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           GWY    E ++ ++++    DG+  N      V+ ++EE YFF+LS YQD LL + + HP
Sbjct: 122 GWYCTPCETFWTENKLM---DGKCPNPDCGRDVELLKEESYFFKLSKYQDALLRHIKDHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+I F++ GL+DL +SR TF WGI++P +P++++YVW+DAL NY++  GY
Sbjct: 179 DFIQPASRRNEMIKFIEGGLEDLCVSRTTFQWGIQVPFNPKHVVYVWLDALINYISALGY 238

Query: 245 LDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
              PDG    ++WPA++H++GKDI+RFHA+ WP  L++ ++PLPK V+ HG+ L K G K
Sbjct: 239 ---PDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGHGWYLSKEGGK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKS GNV D  E+I   G DA+RYFL+RE+  G DG Y +D L +R+N+DLAN +GN V
Sbjct: 296 ISKSRGNVQDSFELIRRYGSDAIRYFLLREMQVGTDGAYSEDSLVERLNSDLANDLGNFV 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS++MI+K   G+IP     TE +  + ++   V+ ++ E ++      AL  +  LVS
Sbjct: 356 SRSLAMIVKYRGGVIPKAAEPTELEAELRALGQEVVAKVEERLEAHDPAGALENLWRLVS 415

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K    +A   TVL+   E IR L IL   F+PKL  K+F    ++
Sbjct: 416 RMNKYVDETAPWTLAKQEGQQARLDTVLHTFAEAIRILGILCAPFMPKLTGKMFRQCGIS 475

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           DE   +++  +   L  G  + +  + +FPR 
Sbjct: 476 DELLAWEAAKEWAVLGEGIQVQRG-EALFPRI 506


>gi|148265184|ref|YP_001231890.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398684|gb|ABQ27317.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 509

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/510 (44%), Positives = 325/510 (63%), Gaps = 18/510 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ RL G +V F TGTDEHGQK+ KAA  AG
Sbjct: 5   FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFEVFFLTGTDEHGQKVEKAANAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +   D+  + F+ + + LDISY DFIRTT++RH      L+ K+  KGDIY G Y  
Sbjct: 65  ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVADLFTKVMGKGDIYLGEYED 124

Query: 127 WYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           WY    E ++ + ++  YK  D       + P + ++EE YFFR+S YQ++LL++ E++P
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQEQLLAHIEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+ISFV+ GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T  GY
Sbjct: 179 DFIQPKSRRNEIISFVREGLRDLSVSRTTFTWGIPVPGNDKHVIYVWFDALTNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D   G+ +KFWP D H+IGKDILRFHA+YWP FL++A LP+PKKVF+HG+   +G+K+S
Sbjct: 239 PDE-SGNFSKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL NV++P  +I++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++R
Sbjct: 298 KSLQNVVEPNMLIDKYGVDAIRYFLLREVPFGLDGDFSHTALVHRINSDLANDLGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S +M+ K + G++  PG F E D         +++++  ++      +AL  +  +VS  
Sbjct: 358 STAMVNKYFGGVVQAPGVFNEIDSIYREKTEEMVRQVDAHLDELAFSKALQSIWEVVSAG 417

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---V 479
           ++Y D   PW L K     DR +TV+Y  +E  R +  ++ AF+P+   K    L     
Sbjct: 418 NKYIDETAPWTLAKDEAQKDRLATVMYCLLESQRIVYFIISAFMPQTTVKGLGYLGWNEA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            DEN         LKPG  + K  + +FPR
Sbjct: 478 PDENGLRWG---GLKPGTQVIKA-EALFPR 503


>gi|257439196|ref|ZP_05614951.1| methionine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198329|gb|EEU96613.1| methionine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 666

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/516 (41%), Positives = 323/516 (62%), Gaps = 15/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIGH+Y  +  D LARF R+ G +V+F TGTDEHGQKI  
Sbjct: 1   MSEHNTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGKEVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H +TC+ ++ ++ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDRIVATVKDLWKLLDVSYDRFIRTTDDYHVETCQKIFTQLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           KG Y G Y    E+++ D ++  G       + Y+A         EE YFF+   Y D+L
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTGKYADRL 172

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L YYE +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+
Sbjct: 173 LKYYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++
Sbjct: 233 NYISALGYGNETYHDYNKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS+GNV+DP+ + +  GVD++RYFL+REI  G DG +  + L  R+N+DLAN
Sbjct: 293 LMNGGKMSKSVGNVVDPVVLCDRYGVDSIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+V+M  K + G +         D  + ++ + +L ++  +M N  I +AL +
Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHKAAGTEAIDTELETMVNELLGKVTADMDNLTIPQALME 412

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +++   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ 
Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKARLESVLYHLCEALRVAGILLNAYLPSTAPKMM 472

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D L ++  +         ++  + +HK  D +FPR 
Sbjct: 473 DQLGLSTADIDLSKAAYGVQETYTVHKG-DALFPRI 507


>gi|296131644|ref|YP_003638891.1| methionyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030222|gb|ADG80990.1| methionyl-tRNA synthetase [Thermincola potens JR]
          Length = 647

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/512 (41%), Positives = 330/512 (64%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  + AD +AR+ R+ G DV F TG+DEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDNLHIGHAYTTVAADTIARYKRMTGYDVRFLTGSDEHGQKIERTAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV    +VD+    F+++   LD+ YDDFIRTTE RH +  + ++ ++ ++GDIYK  
Sbjct: 62  ARGVEPIDYVDRIVAGFKNLWRHLDVHYDDFIRTTEPRHKEVVQKIFTRLYEQGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E ++ + +  +G           PV+ + EE YFFR+S Y D+LL Y E +
Sbjct: 122 YEGLYCTPCETFWTERQAEEGNCPDC----GRPVERVREESYFFRMSKYADRLLRYIEEN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE+++F+K GL+DL +SR TFDWGIK+P DP++++YVW+DALTNY++  G
Sbjct: 178 PDFIQPVSRRNEMVNFIKQGLEDLCVSRTTFDWGIKVPFDPKHVVYVWVDALTNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    K+WPAD+H++GKDI+RFH I WP  L++   PLPKKV  HG++L +G K+
Sbjct: 238 YGTENDELYKKYWPADVHLVGKDIVRFHTIIWPILLMAIGEPLPKKVMGHGWLLLEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVIDP+ +I++ GVDA+RY+L+RE+  G DG+Y ++ L +R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVIDPLVLIDKYGVDAIRYYLLRELPFGSDGYYAEEALIQRINSDLANDLGNLIS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++M+ K ++GM+  P    E DE +  +    +++ R  M+   +  ALA +  L+  
Sbjct: 358 RTIAMVEKYFNGMVQAPTEKEEIDEDLRQLAMVTVEDYRNQMEKLELSNALASIWKLIGR 417

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K    R    TVLY  +EVIR + +L+  F+ +L +K++    ++ 
Sbjct: 418 ANKYIDETAPWILAKDEAKRPRLGTVLYNLLEVIRIVTVLVSPFMTRLPDKVWVQCGLSG 477

Query: 482 ENRC--FQSLDQRLK-PGFMLHKTFDPIFPRF 510
           +  C  ++S+    + P  +  K  + +FPR 
Sbjct: 478 KEECTTWESVQNWGRFPADINVKRGEALFPRI 509


>gi|297616267|ref|YP_003701426.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144104|gb|ADI00861.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 646

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/475 (44%), Positives = 315/475 (66%), Gaps = 7/475 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  YI+T I YP+   HIGHAY  + AD +AR+ R+ G DV F TG+DEHGQKI +
Sbjct: 1   MGDGKSFYITTPIYYPSDNLHIGHAYTTVAADCIARYKRMQGYDVFFLTGSDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+  K +VD+    F+ + D L IS++DFIRTTE+RH    + +++K+ +KGDIY
Sbjct: 61  TARDKGMEPKAYVDRIVDGFKVLWDTLLISHNDFIRTTEERHEKAVQTIFQKVYEKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y GWY    EA++ + ++    DG+  +    PV+  +EE YFF +S Y ++LL + 
Sbjct: 121 KAKYEGWYCTPCEAFWTERQL---VDGKCPDCDR-PVELTQEESYFFAMSKYAERLLKHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNE+I+F+KSGL+DL +SR TF+WGI IP  P +++YVW DAL NYLT
Sbjct: 177 EENPDFIQPESRRNEMINFIKSGLEDLCVSRTTFEWGIPIPFAPGHVIYVWFDALVNYLT 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D+ +    K+WPAD+H++GKDI+RFH + WP  L++A+LPLPK+VF HG+++ +G
Sbjct: 237 AVGYPDDQE-KFGKYWPADVHLVGKDIVRFHTVIWPTILMAADLPLPKQVFGHGWLMLEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ ++E+ GVD++RY+L++E+  G DG+Y ++ L  R+N+DLAN +GN
Sbjct: 296 GKMSKSKGNVVDPLILVEKYGVDSIRYYLLKELNYGMDGYYSEEMLIARINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVSR++ MI +   G+IP PG     D+ ++   + V  E+   +       AL  V  L
Sbjct: 356 LVSRTIGMIERYCQGVIPVPGPQEGLDQELVDTAAAVYGEVGRQLDRLDFSSALGAVWRL 415

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +S  ++Y D   PW L +     +R +TVLY   EVIR   I+L  F+P L  +I
Sbjct: 416 ISRANKYIDESAPWLLARDEAKRERLNTVLYNLAEVIRITGIMLAPFMPTLPGRI 470


>gi|322420739|ref|YP_004199962.1| methionyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127126|gb|ADW14686.1| methionyl-tRNA synthetase [Geobacter sp. M18]
          Length = 509

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/510 (43%), Positives = 327/510 (64%), Gaps = 12/510 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA 
Sbjct: 2   KPAFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLMGFDVFFLTGTDEHGQKVEKAAN 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T     D+  + F+ + + L+IS+ DFIRTT++RH     +L+ ++  KGDIY G 
Sbjct: 62  AAGETPLELADRVMKRFQSLWEKLEISHTDFIRTTQERHKKGVSVLFDRVMAKGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           Y  WY    E ++ + ++  YK  D       + P + ++EE YFFR+S YQD+LL++ E
Sbjct: 122 YEDWYCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQDQLLAHIE 175

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P  RRNE+ISFVK GL+DLS+SR TF+WGI +P + ++++YVW DALTNY+T 
Sbjct: 176 ANPDFIQPKSRRNEIISFVKEGLRDLSVSRTTFEWGIPVPGNDKHVIYVWFDALTNYITA 235

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D  +G+  K+WP D+H+IGKDILRFH +YWP FL++A LP+PK+VF+HG+   +G+
Sbjct: 236 LGYPDE-EGNFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKRVFAHGWWTVEGQ 294

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL
Sbjct: 295 KMSKSLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALIHRINSDLANDLGNL 354

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++RS +M+ K + G +  PG  +E D++       ++ ++   +++    RAL  +  ++
Sbjct: 355 LNRSTAMLGKYFGGELQAPGEESELDKAYREKTLAMIGQVDGFIEDMAFSRALQAIWEVI 414

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K     +R STV+Y  +E  R +  LL AF+PK A K    L  
Sbjct: 415 SAGNKYIDETAPWTLAKDPEQRERLSTVMYYMLESQRIVYTLLSAFMPKTAEKGLSYLGW 474

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +           LKPG  + K  + +FPR
Sbjct: 475 PEAASAEGLAWGGLKPGTAIAKA-EALFPR 503


>gi|325845442|ref|ZP_08168735.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488548|gb|EGC90964.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 655

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/514 (42%), Positives = 337/514 (65%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  + +D +AR+ R  G DV F TG DEHGQKI + AQ
Sbjct: 3   KPTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRSRGFDVRFLTGMDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   + +VD+ +   + + +++DI+ DDFIRTTEKRH +    ++ K  + GDIYKG 
Sbjct: 63  EAGKEPQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENGDIYKGH 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+YY + ++    DG+  +   + V+ ++EE YFF +  Y D+L+ YY ++
Sbjct: 123 YEGLYCTPCESYYTETQL---VDGKCPDCGRD-VKVVKEESYFFNMKKYADRLMEYYNAN 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFILP  R+NE+++ F+K GL+DLS+SR TFDWG+K+P D ++++YVW+DAL+NY+T  
Sbjct: 179 PEFILPESRKNEMVNNFIKPGLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K  K
Sbjct: 239 GYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+DA+RYFL+RE+  G+DG +  +   +RVN DLAN +GNL+
Sbjct: 299 MSKSKGNVVYPEMLIERYGLDAVRYFLLRELPFGQDGVFSPESFVERVNFDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R+VSMI K +DG+IP   G  TE D+++       ++++ +N ++      L+ + +LV
Sbjct: 359 NRTVSMINKYFDGVIPAYAGQVTEFDQTLEDFIKTTVEKVEKNFEDMQFSIVLSDIWALV 418

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L K   ++A+  +V+    E +RQ+AI+++ F+P+   +IF  L +
Sbjct: 419 ARTNKYIDETAPWVLAKDEANKAALESVMCHLAESLRQIAIMIEPFMPRTTPQIFAQLGI 478

Query: 480 -ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
               ++ + SL+    L  G  +     PIFPR 
Sbjct: 479 EGAASKEWSSLNNYNTLAEGTKVVSKGTPIFPRL 512


>gi|158321682|ref|YP_001514189.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141881|gb|ABW20193.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 654

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/510 (42%), Positives = 326/510 (63%), Gaps = 10/510 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIGH Y  + ADVLARF R  G DV F TGTDEHG+KI +AA+ AG
Sbjct: 6   FYLTTPIYYPSGRLHIGHTYTTVAADVLARFKRFTGYDVQFLTGTDEHGEKIQEAAEKAG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ K ++D+     +D+   +DISYD FIRTT++ H +  + +++ + DKGDIYK  Y G
Sbjct: 66  VSPKEYLDKIVEEIKDLWKKMDISYDIFIRTTDQEHEERVQKIFQTLYDKGDIYKSEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E+++ + ++    +G      + P    +EE YFF+LS YQD+LL Y+E HPE 
Sbjct: 126 WYCTPCESFWTETQL---KEGHVCPDCNRPAHLAKEEAYFFKLSKYQDRLLQYFEEHPEI 182

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
             P  R+NE+++ F+K GL+DL +SR TFDWGIK+P DP++I+YVW DA+ NY+T  GY 
Sbjct: 183 CYPESRKNEMVNNFLKPGLEDLCVSRTTFDWGIKVPFDPKHIIYVWFDAVCNYITALGYG 242

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + + +  K+WPAD+H++GK+I+RFH I WPA L++  +PLPK V+ HG+IL   +K+SK
Sbjct: 243 SDNEETFNKYWPADVHLVGKEIVRFHTIIWPAILMALEIPLPKMVYGHGWILFGADKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN++ P  +IE  G+DA++YFL+RE   G+DG +       R+N+DLAN +GNLVSR+
Sbjct: 303 SKGNIVYPEPLIERYGLDAIKYFLLREFTFGQDGNHTNRNFINRLNSDLANDLGNLVSRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           VSMI K  +G+IP+PG   E D S+  + +    ++   +     H  L ++  +V + +
Sbjct: 363 VSMIEKYNEGIIPSPGVEGEFDGSLKEIATGAASKVENAINKLQFHDGLEEIWKVVRKTN 422

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD-ILFVADE 482
           +Y D   PW L K   N +R +TVLY   E IR +++L++ F+    NKI+  +    D+
Sbjct: 423 KYIDETAPWVLAKDEANKERLNTVLYNLAEAIRIISVLIKPFMESTTNKIWSQVGITEDQ 482

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
              ++S     +LK G  + K  + +FPR 
Sbjct: 483 GTDWESTGTFGKLKAGTAVKKG-EALFPRL 511


>gi|295102779|emb|CBL00324.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 665

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/516 (41%), Positives = 324/516 (62%), Gaps = 15/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGCDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  ++DISYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLMDISYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           KG Y+G Y    E+++ D ++  G       + Y+A         EE YFF+   Y D+L
Sbjct: 121 KGEYTGHYCKPCESFWTDSQLVDGKCPECGREVYDAH--------EEAYFFKTGKYADRL 172

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L  YE +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+
Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GY +      +KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++
Sbjct: 233 NYISALGYGNEKYDEYSKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN
Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+V+M  K + G +         D  + ++ S +L ++  +M +  I +AL +
Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHKVAGTEAIDTELETMTSELLGKVTADMDSLTIPQALME 412

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +++   ++Y D   PW L K   +RA   +VLY   E +R   ILL A++P  A K+ 
Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANRARLESVLYHLCEALRVCGILLNAYLPSTAPKMM 472

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + L +       +      +  + +HK  + +FPR 
Sbjct: 473 EQLGLDASAIDVEKAAYGAQESYTVHKG-EALFPRI 507


>gi|293374654|ref|ZP_06620969.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646744|gb|EFF64739.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 655

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/514 (42%), Positives = 337/514 (65%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  + +D +AR+ R  G DV F TG DEHGQKI + AQ
Sbjct: 3   KPTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRSRGFDVHFLTGMDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   + +VD+ +   + + +++DI+ DDFIRTTEKRH +    ++ K  + GDIYKG 
Sbjct: 63  EAGKEPQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENGDIYKGH 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+YY + ++    DG+  +   + V+ ++EE YFF +  Y D+L+ YY ++
Sbjct: 123 YEGLYCTPCESYYTETQL---VDGKCPDCGRD-VKVVKEESYFFNMKKYADRLMEYYNAN 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFILP  R+NE+++ F+K GL+DLS+SR TFDWG+K+P D ++++YVW+DAL+NY+T  
Sbjct: 179 PEFILPESRKNEMVNNFIKPGLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K  K
Sbjct: 239 GYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+DA+RYFL+RE+  G+DG +  +   +RVN DLAN +GNL+
Sbjct: 299 MSKSKGNVVYPEMLIERYGLDAVRYFLLRELPFGQDGVFSPESFVERVNFDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R+VSMI K +DG+IP   G  TE D+++       ++++ +N ++      L+ + +LV
Sbjct: 359 NRTVSMINKYFDGVIPAYAGQVTEFDQTLEDFIKTTVEKVEKNFEDMQFSIVLSDIWALV 418

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L K   ++A+  +V+    E +RQ+AI+++ F+P+   +IF  L +
Sbjct: 419 ARTNKYIDETAPWVLAKDEANKAALESVMCHLAESLRQIAIMIEPFMPRTTPQIFAQLGI 478

Query: 480 -ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
               ++ + SL+    L  G  +     PIFPR 
Sbjct: 479 EGAASKEWNSLNNYNTLAEGTKVVSKGTPIFPRL 512


>gi|39997330|ref|NP_953281.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39984221|gb|AAR35608.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506267|gb|ADI84990.1| methionyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 510

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/505 (43%), Positives = 323/505 (63%), Gaps = 8/505 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ +L G +V F TGTDEHGQK+ KAA  AG
Sbjct: 5   FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAANTAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T     D+  + F+ + + LDI Y DFIRTT++RH      ++ KI  +GDIY G Y  
Sbjct: 65  ETPLELADRVVKRFQGLWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYED 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++    DG+  +  + PV  ++EE YFFR+S YQ++LL++ E++P+F
Sbjct: 125 WYCTPCETFWTETQL---IDGKCPDC-NRPVDKLKEESYFFRMSKYQEQLLAHIEANPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ISFVK GL+DLS+SR +F+WGI +P + ++++YVW DALTNY+T  GY D
Sbjct: 181 IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPD 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                K  FWP D+H+IGKDILRFHA+YWP FL++A LP+PKKVF+HG+   +G+K+SKS
Sbjct: 241 EQSAFKT-FWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKS 299

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           L NV++P  +++  G+DA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++RS 
Sbjct: 300 LQNVVEPNMLVDRYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRST 359

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K +DG++P PG  TE D +       +++++   M      + L  +  ++S  ++
Sbjct: 360 AMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDELAFSKGLQAIWEVISAGNK 419

Query: 427 YFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K    R    TV+Y  +E  R + ++L AF+P+ + K    L   +  R
Sbjct: 420 YIDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCR 479

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPR 509
                  RL PG ++ K  + +FPR
Sbjct: 480 EEDLAWGRLAPGTLIVKA-EALFPR 503


>gi|290967766|ref|ZP_06559319.1| methionine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782125|gb|EFD94700.1| methionine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 645

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/476 (44%), Positives = 310/476 (65%), Gaps = 5/476 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+++ YI+T I YP+A+ HIGH Y   IAD LARFHRL G +V F TG+DEHGQKI +
Sbjct: 1   MAEKKRYYITTPIYYPSAKLHIGHTYCTTIADTLARFHRLRGDEVFFLTGSDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+    +V+     F+D+   L IS DDFIRTTE RH    + L +    KGDIY
Sbjct: 61  AAEEKGIQPIEYVNDIVALFQDLWKRLQISNDDFIRTTEARHEKVVQKLMEISYQKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y+GWY    E+++ ++++ +G           P++ ++EE YF +++ Y D+ L + 
Sbjct: 121 KGEYTGWYCTPCESFWPENKLPEGK--HICPDCGRPLELVKEEAYFLKMNKYADRWLQFI 178

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +PEFI P  RRNE+I+FVKSGL+DL +SR +FDWG+K+P DP++++YVW DAL NYLT
Sbjct: 179 EENPEFIQPESRRNEMIAFVKSGLEDLCVSRTSFDWGVKVPWDPKHVVYVWFDALANYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYLDNP+  K KFWPA LH++GK+I+RFH I WP  L+S +LPLPK+VF HG+++  G
Sbjct: 239 AIGYLDNPEQFK-KFWPATLHLVGKEIVRFHTIIWPIILMSCDLPLPKQVFGHGWLIVDG 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP+ +I   G DALRY+L++EI  G+DG +       R+N+DLAN +GN
Sbjct: 298 TKMSKSLGNVVDPVPLIARYGADALRYYLLKEIRLGQDGNFSLPSFLGRINSDLANDLGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R+++M+ K   G++P P A    D  +    + +L    + M+   I+ A+  +   
Sbjct: 358 LLQRTLAMVEKYEQGIVPAPSATAPVDMQLRQAAAEMLDVYTQAMETMQINEAINALWGF 417

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   ++Y D   PW L K +   +R  TVLY  +E +R +AI +   +P  A +I+
Sbjct: 418 IHRTNKYIDETMPWSLAKEDAQRERLRTVLYNLIEALRIIAISVSPIMPACAEEIW 473


>gi|304438288|ref|ZP_07398229.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368654|gb|EFM22338.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 516

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/484 (45%), Positives = 323/484 (66%), Gaps = 7/484 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+A+ HIGHAY   +AD +AR+ RL G DV F TG+DEHGQKI +
Sbjct: 1   MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T   +VD+   +F+++  +L ISYDDFIRTT+ RH++  + ++++I D+GDIY
Sbjct: 61  AAEKEGITPIRYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   ++    +G   +  H PVQ + EE YFFR+S Y D+LL+Y 
Sbjct: 121 KGEYKGLYCTPCESYWTRLQL--DENGCCPDC-HRPVQEVSEEAYFFRMSKYADRLLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL + +    K+WPAD+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYLHDKEMFH-KYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ +IEE G DA+RYFL+REIA G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPVALIEEFGADAIRYFLLREIALGQDGNISRDALIGRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T+ D ++ ++ +  +++  E M    +  A+  V +L
Sbjct: 357 LLHRTLSMAKKYRKGVITKGEGRTDFDAALETMTAATVRDYTEQMDAMELSAAVKTVWAL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL- 477
           +S  ++Y D   PW L K     A    VLY  VE +  +++L+  F+P  A +I + L 
Sbjct: 417 ISRTNKYIDETAPWMLAKDEAKAAQLDAVLYHLVETLHIVSVLIAPFMPTTARRIHEQLG 476

Query: 478 FVAD 481
           F AD
Sbjct: 477 FHAD 480


>gi|292670061|ref|ZP_06603487.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648249|gb|EFF66221.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 513

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/513 (43%), Positives = 325/513 (63%), Gaps = 8/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I YP+A+ HIGHAY   +AD +ARF RL G DV F TG+DEHGQKI +
Sbjct: 1   MSGKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGCDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT   +VD+    F+++  +L ISYDDFIRT+E RH++  + ++++I D+GDIY
Sbjct: 61  AAEKEGVTPLQYVDRIVAGFQELWRLLGISYDDFIRTSEPRHYELVQNIFQQIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   ++    +G   +  H PVQ + EE YFFR+S Y D+L++Y 
Sbjct: 121 KGAYKGLYCTPCESYWTKLQL--DENGCCPDC-HRPVQEVAEEAYFFRMSKYADRLIAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL + +   +K+WPAD+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYLHDKE-KFSKYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DPI +IEE G DA+RYFL+REI  G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAVRYFLLREITLGQDGNISRDALIGRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T+ D ++  +    ++   E M+   +  A+    +L
Sbjct: 357 LLHRTLSMAKKYRKGVIAKGTGRTDFDAALEEMAQETVKTYTEQMEQMELSAAIKTAWAL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D   PW L K     A    VLY  VE +R  +IL+  F+P  A +I   L 
Sbjct: 417 ISRTNKYIDETAPWTLAKDEAKAAELDAVLYHLVESLRITSILISPFLPVTARRIHAQLG 476

Query: 479 VADENRCFQSLDQRLK--PGFMLHKTFDPIFPR 509
            A +    Q  D      P      T + +FPR
Sbjct: 477 FATDFDAVQLSDAAWGGLPDGHAVGTAEQLFPR 509


>gi|260888295|ref|ZP_05899558.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861831|gb|EEX76331.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 665

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/512 (42%), Positives = 332/512 (64%), Gaps = 10/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YP+A+ HIGHAY   IAD +ARF RL   DV F TG+DEHGQKI + A+
Sbjct: 14  RKSFYITTPIYYPSAKLHIGHAYCTTIADAVARFKRLTDHDVFFLTGSDEHGQKIQQKAE 73

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT   +VD+    F+ +   L IS DDFIRTTE+RH    + ++++I +KGDIYKG 
Sbjct: 74  EEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKGK 133

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+Y+ + ++   ADG+  +     V  +EE+ YFF++S Y D++L+Y E +
Sbjct: 134 YKGLYCTPCESYWTERQL---ADGKCPDCGRE-VAEVEEDAYFFKMSHYADRVLAYIEEN 189

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI +P  P +++YVW DALTNYLT  G
Sbjct: 190 PDFIQPVSRRNEMINFIKQGLEDLCISRTSFDWGIPVPIAPDHVIYVWFDALTNYLTPIG 249

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +LD+P+  + K+WPAD+H++GK+I+RFH+I WP  L++ +LPLPK V+ HG+++  G+K+
Sbjct: 250 FLDDPEKFE-KYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLIVDGDKM 308

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+++I+E G DA+RYFL+REI  G+DG + +D L  R+NADLAN +GNL+ 
Sbjct: 309 SKSKGNVVDPVQLIDEFGADAIRYFLLREINLGQDGNFSRDALITRINADLANDLGNLLH 368

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K  DG++      +E D + L+     +      M+   +  A+    + +S 
Sbjct: 369 RTLNMIGKFQDGVVEEARGESEIDRAFLADAESAIAAYEREMEEMKLQSAIKTTWAFISR 428

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K    +   +  LY   E +R++++L++ F+P+ A KI+  L +  
Sbjct: 429 ANKYIDETMPWALAKDAAKKQELTNTLYNLAESLRRISVLIEPFMPETAAKIWHQLGMEG 488

Query: 482 ENRCFQSLDQRLKPGFMLHK---TFDPIFPRF 510
           +    +  D R   GF+      + + +FPR 
Sbjct: 489 DFSRVRFADVRTWGGFLAGTHVGSPEQLFPRI 520


>gi|253699686|ref|YP_003020875.1| methionyl-tRNA synthetase [Geobacter sp. M21]
 gi|251774536|gb|ACT17117.1| methionyl-tRNA synthetase [Geobacter sp. M21]
          Length = 509

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/506 (44%), Positives = 325/506 (64%), Gaps = 12/506 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA  AG 
Sbjct: 6   YVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFDVFFLTGTDEHGQKVEKAAIAAGE 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     D+  + F+ + + L+IS  DFIRTT++RH     +L++++ +KGDIY G Y  W
Sbjct: 66  TPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYEDW 125

Query: 128 YSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           Y    E ++ + ++  YK  D       + P + ++EE YFFR+S YQD+LL++ E++P+
Sbjct: 126 YCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQDQLLAHIEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+ISFVK GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T  GY 
Sbjct: 180 FIQPKSRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D   G+  K+WP D+H+IGKDILRFH +YWP FL++A LP+PKKVF+HG+   +G+K+SK
Sbjct: 240 DEA-GNFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKKVFAHGWWTVEGQKMSK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++RS
Sbjct: 299 SLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLNRS 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +M+ K + G++  PG  TE D +     + ++ ++   +++    RAL  V  ++S  +
Sbjct: 359 TAMLGKYFGGVLQAPGEETELDAAYREKTAAMIGQVDGFIEDLAFSRALQAVWEVISAGN 418

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y D   PW L K     +R +TV+Y  +E  R +  LL AF+PK + K    L      
Sbjct: 419 KYIDETAPWTLAKDPEKRERLATVMYYMLESQRVVYSLLCAFMPKTSEKGLCCLGWPKAA 478

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
                    LKPG  + K  + +FPR
Sbjct: 479 EAADLAWGGLKPGTSIAKA-EALFPR 503


>gi|319891443|ref|YP_004148318.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161139|gb|ADV04682.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465387|gb|ADX77540.1| methionyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 657

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/521 (43%), Positives = 338/521 (64%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ RL G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRLQGFDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           NAG++   ++D   ++ + + + LDIS DDFIRTTE+RH +    +++K+  KGDIY G 
Sbjct: 63  NAGMSELDYLDGMIKDIKALWEKLDISNDDFIRTTERRHTEVVEKIFEKLLSKGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVY---KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE +Y +    D VY   K   G+  ++ H  V+ ++EE YFF+LS Y D+L
Sbjct: 123 YEGWYSVPDETFYTETQLVDPVYEDGKIVGGKSPDSGHE-VELVKEESYFFKLSNYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L++Y++HPEFI P  R+NE+I+ F+K GL+DL++SR +F+WG+K+P +P++++YVW+DAL
Sbjct: 182 LAFYDAHPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVKVPSNPKHVVYVWLDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY++  GYL + D    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYVSALGYLTDDDHLFRQYWPADIHLMAKEIVRFHSIIWPIILMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +    R N DLA
Sbjct: 302 VLMKDGKMSKSKGNVMDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVDRTNFDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K +DG +P   G   E DE +  +    ++   E+M       AL
Sbjct: 362 NDLGNLVNRTISMINKYFDGELPAYQGPTHELDEEMEQMALDTVRAYHESMDKLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V  L+S  ++Y D   PW L K    +A+   V+   VE IR  A+LL+ F+     +
Sbjct: 422 STVWKLISRTNKYIDETTPWILAKDESQKAALGNVMAHLVENIRFAAVLLRPFLTHAPYQ 481

Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF+ L + +E    F+ L    +L    M+ +   PIFPR 
Sbjct: 482 IFEQLHIHNEALHGFEGLATYGQLTEPIMVTEKPQPIFPRL 522


>gi|150021072|ref|YP_001306426.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793593|gb|ABR31041.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 634

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/486 (44%), Positives = 320/486 (65%), Gaps = 5/486 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N++PHIG AY  II D++AR+ RL G DV + TGTDEHGQKI +AA+ 
Sbjct: 2   KKFYLTTPIYYVNSEPHIGSAYTTIIGDIIARYKRLIGYDVFYLTGTDEHGQKIMQAAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  K   D+ S  F  +   L I+ D FIRTT+ +H  T ++   K+ + GDIYKG Y
Sbjct: 62  REIEPKQLCDELSEKFSQLWKDLKITNDYFIRTTDPKHMKTVQLFVSKMLENGDIYKGIY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E Y+N+DE  +             + ++EEE YFFRLS Y + LL +++ +P
Sbjct: 122 KGWYCIPCETYWNEDETEQIEGKHICPTCGRELNFVEEENYFFRLSKYTEPLLKHFKENP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++  ++SGLKDLS++R TFDWGI +P+DP +++YVW+DAL NY++  GY
Sbjct: 182 DFVEPDFRRNEMLKILESGLKDLSITRTTFDWGIPMPNDPNHVIYVWVDALINYISAIGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + +  + K+WPADLH+IGK+I RFH++ WPA L+S  LPLPKK+F+HG++   G+KIS
Sbjct: 242 GSDQEKFE-KWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFAHGWLTVNGQKIS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDP E +++ G D +RY+L R+I  GKDG + ++ L  R+N+DLAN  GNL+ R
Sbjct: 301 KSLGNAIDPREFVKKYGNDVVRYYLARDIVFGKDGDFSEENLVHRLNSDLANDYGNLLHR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +++M++K++D +IP P    E DE ++     V ++  E M++  +  AL  +   +  +
Sbjct: 361 TIAMVVKNFDSIIPEPNNIQEIDEKLIKEYFEVKEKYLEYMESYKLTNALETIWEYIRYI 420

Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++YFD  KPW L K+ N  R STVLY T+E   ++A LL  F+P  + ++F+ L    + 
Sbjct: 421 NKYFDENKPWVLAKEGNKGRLSTVLYNTLEAFLKVATLLIPFMPYSSEEVFNRL---GQE 477

Query: 484 RCFQSL 489
           R FQ +
Sbjct: 478 RNFQKI 483


>gi|148270780|ref|YP_001245240.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|147736324|gb|ABQ47664.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 629

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/470 (45%), Positives = 311/470 (66%), Gaps = 2/470 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  + ++      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N D    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +YF+  KPW L K+ N +R  TVLY ++E + ++A++    +P  + ++F
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVF 470


>gi|170289510|ref|YP_001739748.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170177013|gb|ACB10065.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 629

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/470 (45%), Positives = 311/470 (66%), Gaps = 2/470 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  + ++      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N D    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +YF+  KPW L K+ N +R  TVLY ++E + ++A++    +P  + ++F
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVF 470


>gi|327438102|dbj|BAK14467.1| methionyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 653

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/517 (42%), Positives = 335/517 (64%), Gaps = 11/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MSEQQTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLKGFDVRFLTGMDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ A +  + +V++ +   + + + +DISY+DFI+TTE RH D+   +++K  D GDIY
Sbjct: 61  KAQEANMHPQDYVNEIAEGAKKLWNTMDISYNDFIQTTETRHTDSVEKIFQKFLDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E+YY + ++    DG+  +   + VQ ++EE YFF +  Y D+LL+YY
Sbjct: 121 KGEYEGLYCVPCESYYTETQL---VDGKCPDCGRD-VQKVKEESYFFNMKKYADRLLAYY 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E++PEFI P  R+NE+I+ F+K GL+DLS+SR +FDWGIK+P +P++++YVW+DAL+NY+
Sbjct: 177 ENNPEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGNPKHVIYVWVDALSNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T+ GY  + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K
Sbjct: 237 TSLGYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMK 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+ P  +IE  G+DA RYFL+RE+  G+DG +  +   +R N DLAN +G
Sbjct: 297 DGKMSKSKGNVVYPEMLIERYGLDATRYFLLRELPFGQDGVFSPESFVERTNFDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+VSM+ K +DG+IPT     T+ DE++      V     E+M        L+++ 
Sbjct: 357 NLLNRTVSMMNKYFDGVIPTENLEATQFDEALKEHAESVRIRYEESMDKMQFSVVLSELW 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           SLVS  ++Y D   PW L K   D  + + V+    E +R +A+++Q F+     +I + 
Sbjct: 417 SLVSRTNKYIDETSPWVLAKDEADHNKLAAVMNNLAESLRHIAVMIQPFMTNAPKQIIEQ 476

Query: 477 LFVADEN---RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L + +++      ++    +     + +   PIFPR 
Sbjct: 477 LGLDEKSLQWDTIETFGNVIPKNIKVAEKGTPIFPRL 513


>gi|15643843|ref|NP_228891.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6094407|sp|O33925|SYM_THEMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4981630|gb|AAD36162.1|AE001768_11 methionyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|2645225|gb|AAB87143.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 629

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/470 (45%), Positives = 311/470 (66%), Gaps = 2/470 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKRLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  + ++      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDSLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N D    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGFDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +YF+  KPW L K+ N +R  TVLY ++E + ++A++    +P  + ++F
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSEEVF 470


>gi|281413086|ref|YP_003347165.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374189|gb|ADA67751.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 629

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/470 (45%), Positives = 310/470 (65%), Gaps = 2/470 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  +  +      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEEHFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N D    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WN-DEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +YF+  KPW L K+ N +R  TVLY ++E + ++A++    +P  + ++F
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVF 470


>gi|313672884|ref|YP_004050995.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939640|gb|ADR18832.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 636

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 308/469 (65%), Gaps = 6/469 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADV++R+ RL G DV F TGTDEHGQKI  AA+
Sbjct: 3   KPTFYVTTPIYYVNDVPHIGHAYTTVAADVISRYKRLSGYDVFFLTGTDEHGQKIEMAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K   D+    F+++   L+ISYD FIRTT+  H  + + ++KK+ D GDIY+G 
Sbjct: 63  KQGITPKQLADKVVERFKNLWIKLNISYDKFIRTTDDYHKKSVQYIFKKMMDNGDIYQGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E Y+ + ++    DG    +       ++E  YFF++S YQD LL + E +
Sbjct: 123 YEGWYCTPCETYWTETQLL---DGNCCPSCRRETTRLKEPSYFFKMSKYQDALLKHIEEN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISF+K GL+DLS+SR +F WG+++PDDP++++YVWIDALTNY++  G
Sbjct: 180 PDFIKPASRRNEIISFIKEGLRDLSVSRVSFKWGVQVPDDPKHVIYVWIDALTNYISALG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  N D    K+WPAD H++GKDILRFH +YWP  L+S  +PLPK VF+HG+   +G+K+
Sbjct: 240 Y-PNEDDLFGKYWPADFHIVGKDILRFHTVYWPTMLMSIGVPLPKSVFAHGWWTVEGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP  ++++ GVD +RYFL+RE+  G DG +    L  R+N DL+N +GNL++
Sbjct: 299 SKSLGNAIDPNWLVDKFGVDQIRYFLMREVPFGLDGDFSFKALIHRINGDLSNDLGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M+ + +DG++         D+ I  +     +E+ +N+Q+   ++AL  +  LVS 
Sbjct: 359 RTLGMLNRYFDGVVQPYVVGDPEDDRIAELIVSTFKEMDKNLQDLAFNKALGTIWELVSA 418

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++++ D   PW L K  +  DR  +VLYV ++ IR L+++L  F+P  A
Sbjct: 419 LNKFIDTMAPWNLAKDPSKRDRLGSVLYVVLDGIRALSLMLYPFMPNTA 467


>gi|295694735|ref|YP_003587973.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410337|gb|ADG04829.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 684

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/519 (43%), Positives = 327/519 (63%), Gaps = 21/519 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YP+ + HIGHAY  + AD +AR+ RL G DV++ TGTDEHGQKI + A+
Sbjct: 3   RKTFYITTPIYYPSNKLHIGHAYTTVAADAMARYKRLRGYDVMYLTGTDEHGQKIERRAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + FVD+     +++   LDISYDDFIRTTE RH    + +++++ ++GDIY+  
Sbjct: 63  EEGKTPQAFVDEIVGWIQELWRKLDISYDDFIRTTEPRHKKAVQRIFQRLMEQGDIYQAD 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++      + A+G        PV+ + E+ YFFR+S Y  +LL YYE +
Sbjct: 123 YEGLYCTPCESFWT----ARQAEGGRCPDCGRPVELVREKSYFFRMSKYVPQLLRYYEEN 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R++E+I+ F+K GL+DL +SR TFDWGI +P DP +++YVWIDAL+NY+T  
Sbjct: 179 PEFIQPESRKHEMINNFIKPGLEDLCVSRTTFDWGIPVPGDPDHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GYL +    + KF   WPAD+ V+GK+I+RFH IYWP  L++  LPLPKKVF HG++L  
Sbjct: 239 GYLSDDPAEREKFDRYWPADVQVVGKEIVRFHTIYWPIMLIALGLPLPKKVFGHGWLLTP 298

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVIDP  +++  G DA+RYFL+REI  G DG +  + L +R+N DLAN +G
Sbjct: 299 QGKMSKSKGNVIDPNLLLDRYGSDAIRYFLLREIPFGADGVFTPEALIQRLNFDLANDLG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ +I +   G IPTP    + D  + S+ +  +  + E M+      ALA +  
Sbjct: 359 NLLNRTLPLIERFAGGRIPTPTMVQDPDGELRSLAAETVSRVEEAMEKMEFSTALAAIWQ 418

Query: 420 LVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L+   ++Y D   PW E+K    +RA TVLY   EVIR ++ILLQ F+ K   ++   L 
Sbjct: 419 LLGRANKYIDETAPWAEMKAGRTERAHTVLYHLAEVIRIVSILLQPFLTKAPVEMQRRLG 478

Query: 479 VA-------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++       D  R F +    L PG  ++K  DP+FPR 
Sbjct: 479 LSPGPHTHWDSARMFGT----LPPGLPVYKG-DPLFPRL 512


>gi|315925586|ref|ZP_07921796.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621127|gb|EFV01098.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 724

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/513 (42%), Positives = 327/513 (63%), Gaps = 8/513 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  Y++T I YP+   HIGH Y  + AD L RF R  G D    TG+DEHGQKI K 
Sbjct: 76  EEKKTFYMTTPIYYPSGDLHIGHTYTTVAADTLTRFKRQQGYDAYMLTGSDEHGQKIQKI 135

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT K +VD      +++  +++I Y  FIRTT+  H  + + ++K++ D+GDIYK
Sbjct: 136 AEEKGVTPKAYVDGTVAKIKELWKLMNIDYSQFIRTTDADHVKSVQKIFKRLYDQGDIYK 195

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY   DEA++ D +V    DG+  +    PV+   EE YFFR+S Y D+LL Y E
Sbjct: 196 GRYEGWYCTPDEAFWTDTQV---VDGKCPDCGR-PVERASEEAYFFRMSKYADRLLDYIE 251

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           SHP FI P  R+ E+I+ F+K GL+DL +SR +FDWGI +  DP +++YVWIDAL+NY+T
Sbjct: 252 SHPGFIQPEARQKEMINNFIKPGLQDLCVSRTSFDWGIPVEFDPGHVVYVWIDALSNYIT 311

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL++      ++WPADLH++GKDI+RFH IYWP  L++ +LPLPK ++ HG+IL KG
Sbjct: 312 ALGYLNDKPQLMDRYWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKTIYGHGWILLKG 371

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+E++++ GVD LRY +++E+  G DG Y +D L   +NADLAN +GN
Sbjct: 372 GKMSKSIGNVVDPVELVKKYGVDPLRYHVLKEMKYGADGNYSEDLLVGNINADLANDLGN 431

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M +K +DG IP      + D+++  V   V+Q   + M      RAL  +  L
Sbjct: 432 LLSRTVAMTVKYFDGTIPEERQSGDHDDALARVAEAVVQNYAKWMDKLDFSRALESIWEL 491

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K  +   R + VLY   E +R + +L+ A +P+ ++KI + + 
Sbjct: 492 IGRANKYIDETEPWVLGKDDSQKSRLAAVLYNLSEALRIVGVLIAAPMPETSDKILEQMR 551

Query: 479 VADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
           + ++   + S+      P  +  +  +P++PR 
Sbjct: 552 IPEDLATWDSIQHFGSYPSGVQVERCEPLYPRI 584


>gi|222055242|ref|YP_002537604.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564531|gb|ACM20503.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 509

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/479 (45%), Positives = 313/479 (65%), Gaps = 11/479 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ RL G +V F TGTDEHGQK+ KAA  AG
Sbjct: 5   FYVTTPIYYVNDVPHIGHAYTTLAADVLARYRRLKGYEVFFLTGTDEHGQKVEKAANAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +   D+  + F+ + + LDISY DFIRTT++RH      ++K + +KGDIY G Y  
Sbjct: 65  ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVSKIFKDVMEKGDIYLGEYED 124

Query: 127 WYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           WY    E ++ + ++  YK  D       + P + ++EE YFFR+S YQ++LL++ E++P
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQEQLLAHIEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+ISFVK GL+DLS+SR TF WGI +P + ++I+YVW DAL NY+T  GY
Sbjct: 179 DFIQPKSRRNEIISFVKEGLRDLSVSRTTFSWGIPVPGNDKHIIYVWFDALANYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +   G+  KFWP D H+IGKDILRFHA+YWP FL++A LPLPKKVF+HG+   +G+K+S
Sbjct: 239 PEE-SGNFDKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPLPKKVFAHGWWTIEGQKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL NV++P  ++E+ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++R
Sbjct: 298 KSLQNVVEPNMLVEKYGVDAVRYFLLREVPFGLDGDFSHSALVHRINSDLANDLGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S +M+ K + G +  P   T+ D +       +++++  +++     +AL  +  +VS  
Sbjct: 358 STAMLNKYFGGTVQAPADLTDMDLAYQEKTREMVRQVDMHLEELAFSKALQAIWEVVSAG 417

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++Y D   PW L K     +R +TV+Y  +E  R +  L+ AF+P+ A K    L V D
Sbjct: 418 NKYIDETAPWTLAKDPVQKERLATVMYCLLESQRIVYQLVSAFMPQTAVKALSYLGVTD 476


>gi|56961843|ref|YP_173565.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56908077|dbj|BAD62604.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 655

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/520 (41%), Positives = 336/520 (64%), Gaps = 20/520 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIGH Y  +  D +AR+ RL G DV + TGTDEHGQKI + A+  G
Sbjct: 6   FYITTPIYYPSGKLHIGHTYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQKAKEKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++   + ++  +  +++   LDIS+DDFIRTTEKRH +    +++++ ++GDIY G Y G
Sbjct: 66  ISPLEYTNEMVKPIKELWKKLDISHDDFIRTTEKRHTNMVEKIFEQLVEQGDIYLGEYEG 125

Query: 127 WYSLRDEAYYNDDEVY---KGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQDKLLSY 179
           WY + DE +Y + E+    K   G     +     +PV+ + E+ YFFR+S Y D+LL++
Sbjct: 126 WYCVSDETFYGERELVDPIKDESGNIIGGKSPDSGHPVEKVREKSYFFRMSKYADRLLAF 185

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P+FI P  R+NE+I+ F+K GL+DL++SR +F WG+K+P +P++++YVWIDALTNY
Sbjct: 186 YEENPDFIQPASRKNEMINNFIKPGLQDLAVSRTSFTWGVKVPSNPKHVVYVWIDALTNY 245

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY    D    K+WPAD+H++GKDILRFH IYWP  L++ +LPLPKKVF HG+ L 
Sbjct: 246 ITALGYGTADDTLYQKYWPADVHLVGKDILRFHTIYWPIMLMALDLPLPKKVFGHGWFLT 305

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP  +I+  G+DA+RY+L+RE+  G DG +  +   +RVN DLAN +
Sbjct: 306 KDGKMSKSKGNVVDPAPLIDHFGLDAIRYYLLREVPFGADGVFTPEAFVERVNYDLANDL 365

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRAL 414
           GNL++R+V+MI K ++G IP   A+ +S    DE +L +    + ++ + M+      AL
Sbjct: 366 GNLLNRTVAMINKYFNGEIP---AYVKSASPFDEDLLDLVQATITKVEDAMEEMEFSIAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           A +  LVS  ++Y D  +PW L K   +R    +V+Y   E +R +++L++ F+ +   K
Sbjct: 423 AAIWQLVSRTNKYIDETQPWMLAKEEDNRELLGSVMYHLAESLRIISVLIRPFMTRTPAK 482

Query: 473 IFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           I+  L + +    ++S+    +L  G  + K  +P+FPR 
Sbjct: 483 IWAQLGIDESLAGWESIRVFGQLPAGTKVSKG-EPVFPRL 521


>gi|238927712|ref|ZP_04659472.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884428|gb|EEQ48066.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 516

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/475 (44%), Positives = 317/475 (66%), Gaps = 6/475 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I YP+A+ HIGHAY   +AD +AR+ RL G DV F TG+DEHGQKI +
Sbjct: 1   MSGKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T   +VD+   +F+++  +L ISYDDFIRTT+ RH++  + ++++I D+GDIY
Sbjct: 61  AAEKEGITPIQYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   ++    +G   +  H PVQ + EE YFFR+S Y D+LL+Y 
Sbjct: 121 KGEYKGLYCTPCESYWTRLQL--DENGCCPDC-HRPVQEVSEEAYFFRMSKYADRLLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL + +    K+WPAD+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYLHDKEMFH-KYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ +IEE G DA+RYFL+REIA G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPVALIEEFGADAIRYFLLREIALGQDGNISRDALIGRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G++      T+ D ++ ++ +  +++  E M    +  A+  V +L
Sbjct: 357 LLHRTLSMAKKYRKGVVTKGEGRTDFDAALETMTAATVRDYTEQMDAMELSAAVKTVWAL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +S  ++Y D   PW L K     A    VLY  VE +  +++L+  F+P  A +I
Sbjct: 417 ISRTNKYIDETAPWTLAKDEAKAAQLDAVLYHLVETLHIVSVLIAPFMPTTARRI 471


>gi|147676404|ref|YP_001210619.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146272501|dbj|BAF58250.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 544

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/509 (42%), Positives = 320/509 (62%), Gaps = 12/509 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+   HIGHAY  + AD +ARF ++ G D  F TGTDEHGQKI +AA++ G
Sbjct: 36  FYITTPIYYPSDNLHIGHAYTTVAADAVARFKKMTGYDTRFLTGTDEHGQKIERAARSRG 95

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + FVD+     + +   L++ YDDFIRTTE RH       ++K+ ++GDIYK  Y G
Sbjct: 96  EDPQEFVDKIVAGIKLLWQKLEVDYDDFIRTTEPRHKKVVSAFFQKLYEQGDIYKAGYEG 155

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    EA++ +  +    +G        PV+ + EE YFFR+S Y ++LL + E HPEF
Sbjct: 156 WYCTPCEAFWAESRL----EGGNCPDCGRPVELLREESYFFRMSKYAERLLRHIEEHPEF 211

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE++SF+KSGL+DL +SR TF+WGI +P DP +++YVW+DALTNY++  GY  
Sbjct: 212 IQPASRRNEMVSFIKSGLEDLCVSRTTFNWGIPVPFDPGHVIYVWVDALTNYISALGYGT 271

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDI+RFH++ WP  L++A L LP++V  HG++L +  K+SKS
Sbjct: 272 EDDSLFKKYWPADVHLMGKDIVRFHSVIWPILLMAAGLELPRQVVGHGWLLLESGKMSKS 331

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I++ GVDA+RY+L+RE+  G DG+Y ++ L +R+N DLAN +GNLVSRS+
Sbjct: 332 KGNVVDPLVLIDKYGVDAIRYYLLRELPFGADGYYSEEALVERINKDLANDLGNLVSRSI 391

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K + G +  PG     D  ++ +  +    + E M    +  ALA +  LV   ++
Sbjct: 392 AMVEKYFQGRVQPPGLPEGPDRELIDLAEQTPAAVEELMDKMDLSGALAAIWRLVGRANK 451

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K  +  DR +TV+Y   E +R + +++  F+PKL  +++  L +  ENR
Sbjct: 452 YVDETAPWGLAKDPSRADRLATVMYNLAESLRFITVMVSPFMPKLPARVWAQLGL--ENR 509

Query: 485 ----CFQSLDQRLKPGFMLHKTFDPIFPR 509
                ++SL     P     K    +FPR
Sbjct: 510 PELHTWESLVWGKLPANTCVKRGPALFPR 538


>gi|254797222|ref|YP_003082063.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590469|gb|ACT69831.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 521

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/507 (43%), Positives = 318/507 (62%), Gaps = 14/507 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T + Y N  PHIGHAY  +IADVL R  RL G +V FTTGTDEHGQK+   A+  
Sbjct: 20  RYYVTTPVYYVNDNPHIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTAKKH 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G     FVD  SR FRD+   +   + DFIRTTE RH +  + LW  IS    I  G YS
Sbjct: 80  GKCEIDFVDHVSRRFRDLCVAMHYEFSDFIRTTETRHKEAVQTLWSTISKNNSISLGEYS 139

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS RDEA+Y + E+  G           PV W +E  YFF+LS + + L   Y  +P 
Sbjct: 140 GWYSERDEAFYTEAELQNG-----LAPTGAPVSWTKEACYFFKLSQFSEPLKKLYAENPT 194

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R NE+++F+ +G+ DLS+SR    WGI +PDDP + +YVW+DALTNY+++ GY 
Sbjct: 195 FIQPKSRFNEMLAFLNTGMHDLSISRTRVKWGINVPDDPAHTVYVWLDALTNYVSSIGYP 254

Query: 246 D-NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + + D   + FW     +H+IGKDILRFH+IYWPAFL++ANL  P  + +HG+ L+ GEK
Sbjct: 255 NTSTDSLFSAFWDNARVIHIIGKDILRFHSIYWPAFLMAANLKTPDVILAHGWWLNDGEK 314

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGN+IDP E+I E GVD +RYFL+REI  GKDG + K  LK+R+N++LA+ IGNL 
Sbjct: 315 ISKSLGNIIDPFELISEFGVDPVRYFLIREITVGKDGNFSKVNLKERINSELADNIGNLF 374

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R++++  K    + P  G   ES+  +L     + +E + +++   ++ +L ++I L S
Sbjct: 375 HRTLTLTAK---LLGPKIGEIYESENELLEFAYSLAKEYKNDIELLDLNSSLDRIIQLSS 431

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + Y   ++PW+LK+  P+ A  +L+  +E +R +AI LQ FVP+ A+ + D+L V   
Sbjct: 432 KANEYISMEEPWKLKE-KPETAGRILHSVLEALRVIAIGLQPFVPQSASTMLDLLAVPPG 490

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIF 507
            R   ++++  R +PG  +     P+F
Sbjct: 491 ERKLANMNKESRTRPGTQIKLPISPLF 517


>gi|197119575|ref|YP_002140002.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197088935|gb|ACH40206.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 509

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/506 (43%), Positives = 325/506 (64%), Gaps = 12/506 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA  AG 
Sbjct: 6   YVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFDVFFLTGTDEHGQKVEKAAIAAGE 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     D+  + F+ + + L+IS  DFIRTT++RH     +L++++ +KGDIY G Y  W
Sbjct: 66  TPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYEDW 125

Query: 128 YSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           Y    E ++ + ++  YK  D       + P + ++EE YFFR+S YQD+LL++ E++P+
Sbjct: 126 YCTPCETFWTETQLIDYKCPDC------NRPTEKLKEESYFFRMSKYQDQLLAHIEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+ISFVK GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T  GY 
Sbjct: 180 FIQPKSRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D   G+  K+WP D+H+IGKDILRFH +YWP FL++A LP+PKKVF+HG+   +G+K+SK
Sbjct: 240 DE-QGNFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKKVFAHGWWTVEGQKMSK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++RS
Sbjct: 299 SLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLNRS 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +M+ K + G++  PG  T+ D +     + ++ ++   +++    RAL  +  ++S  +
Sbjct: 359 TAMLGKYFGGVLQAPGEETDLDAAYREKTAAMIGQVDGFIEDLAFSRALQAIWEVISAGN 418

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y D   PW L K     +R +TV+Y  +E  R +  LL AF+PK + K    L      
Sbjct: 419 KYIDETAPWTLAKDPEKRERLATVMYYMLESQRVVYSLLSAFMPKTSEKGLCCLGWPQAP 478

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
                    LKPG  + K  + +FPR
Sbjct: 479 DAGDLAWGGLKPGTPIAKA-EALFPR 503


>gi|224475632|ref|YP_002633238.1| methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420239|emb|CAL27053.1| Methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 667

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/522 (42%), Positives = 332/522 (63%), Gaps = 16/522 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + A 
Sbjct: 3   KDTFYITTPIYYPSGKLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAH 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV+   ++D+     + + + L+IS DDFIRTTEKRH +    +++++ ++GDIY G 
Sbjct: 63  KAGVSELEYLDEMISGIKSLWEKLEISNDDFIRTTEKRHEEVVAKVFERLLEQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE----VY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y GWYS+ DE YY + +    VY    K   G+  ++ H  V+ ++EE YFF +S Y D+
Sbjct: 123 YEGWYSVPDETYYTESQLEEPVYDDNGKIIGGKSPDSGHE-VELVKEESYFFNISKYADR 181

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL++Y+ HPEFI P  R+NE+I+ F+K GL DL++SR TFDWG+++P +P++++YVWIDA
Sbjct: 182 LLAFYDEHPEFIQPPSRKNEMINNFIKPGLTDLAVSRTTFDWGVQVPSNPKHVVYVWIDA 241

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY++  GYL   D    K+WPADLH++ K+I+RFH+I WP  L++ +LPLPK+VF+HG
Sbjct: 242 LVNYISALGYLSEDDSLFKKYWPADLHLMAKEIVRFHSIVWPILLMALDLPLPKRVFAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +    R N DL
Sbjct: 302 WILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVDRTNFDL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNLV+R+++MI K +DG +P   G   E D  +       ++E  ENM+N     A
Sbjct: 362 ANDLGNLVNRTIAMINKYFDGELPAYEGPKHELDAEMEQFALDTVKEYHENMENLQFSVA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ V   +S  ++Y D   PW L K +  +     V+   VE IR   +LL+ F+     
Sbjct: 422 LSTVWKFISRTNKYIDETTPWVLAKDDSQKEMLGNVMAHLVENIRFATVLLRPFITHAPR 481

Query: 472 KIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +IF+ L + + E   F SL++   LK    + +   PIFPR 
Sbjct: 482 QIFEQLNINSPELFGFDSLNEYGALKAPISVTEKPQPIFPRL 523


>gi|220932862|ref|YP_002509770.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219994172|gb|ACL70775.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 653

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/511 (43%), Positives = 323/511 (63%), Gaps = 13/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIGHAY  + AD LA+F  +   D +F TG+DEHGQKI + A  AG
Sbjct: 6   FYVTTPIYYPSDRLHIGHAYTTVAADTLAKFKEMQDYDTMFLTGSDEHGQKIERKASEAG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
                +VD+    F+D+   L + YD FIRTT   H    + ++KKI +KGDIYKG Y G
Sbjct: 66  KKPGEYVDEIVATFKDLWKRLGVDYDYFIRTTNPDHEKVVQEIFKKIYEKGDIYKGKYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WY    E ++ + ++    +G+        PV+W+EEE YFF+LS Y D+LL + + HPE
Sbjct: 126 WYCTPCETFWTERQL----EGEKVCPDCGRPVEWVEEESYFFKLSKYADRLLEHIKKHPE 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RR E+I+F++SGL+DLS+SR TFDWGI +P D  +++YVW DAL+NY++  GYL
Sbjct: 182 FIQPESRRKEMINFIESGLEDLSVSRTTFDWGIPVPIDDDHVIYVWFDALSNYISAIGYL 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D     +WPAD+H++GKDILRFH I WP  L++ +LPLPKKVF HG++L +  K+SK
Sbjct: 242 SD-DKKFNHYWPADVHIVGKDILRFHTIIWPIILMALDLPLPKKVFGHGWLLTETGKMSK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP ++I++ GVD +RY+L+RE+A G+DG Y  + L KR+N+DLAN +GNL+ R+
Sbjct: 301 SKGNVVDPNKLIDDFGVDPIRYYLLREVAFGQDGTYSTEALIKRINSDLANDLGNLLHRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           V+M+ K +DG+IP PG   E D+ + +   + L EI  +M N     AL  + + +   +
Sbjct: 361 VTMVDKYFDGVIPEPGVEKEVDKDLKNYALKTLDEIDNSMDNLKYAVALESLWNFIRRSN 420

Query: 426 RYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481
           +Y D   PW L +     DR  TVLY  +E +R +A +L+ F+ +    I + +   D  
Sbjct: 421 KYIDQTTPWILARDEDKKDRLGTVLYNLIEALRIIAGMLKPFLVETPYMIGEQINARDLI 480

Query: 482 ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           E   +  L Q   L PG  + K   PI+PR 
Sbjct: 481 EKASWSDLKQWGLLSPGRKVKKG-KPIYPRI 510


>gi|114776564|ref|ZP_01451609.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553394|gb|EAU55792.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 512

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/517 (42%), Positives = 325/517 (62%), Gaps = 18/517 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y++T I Y N +PH+GH Y  I ADVLAR+ R+ G DV F TG DEHGQK+ +AA+ 
Sbjct: 2   ESYYVTTPIYYVNDEPHLGHIYTTIAADVLARYQRMAGRDVFFLTGVDEHGQKVQQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      DQ    ++ +   L I+ DDFIRT+  RH    + +W+++ + G IYKG Y
Sbjct: 62  RGIEPIELADQVVERYQSLWPELAITNDDFIRTSSDRHRRGVQAMWRRLENAGAIYKGFY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSY 179
             WY +  E Y+ + ++    D   +  +H P     V+ ++EE YFFRLSAYQD+LL Y
Sbjct: 122 EDWYCVPCETYWTETQL---NDADCWEEKHCPDCKRAVEKVQEESYFFRLSAYQDRLLEY 178

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             ++P+FI P  RRNEV+ FV+SGL DLS+SR TF WG+ +P D ++++YVWIDALTNYL
Sbjct: 179 INANPDFIGPASRRNEVLRFVESGLNDLSVSRTTFSWGVPVPGDEKHVIYVWIDALTNYL 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  G+   PD    K+WPAD+H+IGKDILRFHAIYWP  L++A+LPLP+++F+HG+   +
Sbjct: 239 SALGF---PDQELPKYWPADVHLIGKDILRFHAIYWPCMLMAADLPLPQRLFAHGWWTVE 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GN + P +++E+   D +RYFL+RE+  G+DG +    +K+R N+DLAN +G
Sbjct: 296 GEKMSKSKGNALRPADLLEQYDADVIRYFLLREVPFGQDGDFSFSAMKQRYNSDLANDVG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++RS++M+ K  DG++  PG     D ++++    + +++  +M  Q  H AL ++  
Sbjct: 356 NLLNRSLAMLNKYRDGVLAEPGDEQAVDRTLIADVEGMQRDVAAHMNKQAFHLALERISV 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +V   +RY +   PW L K   + R +TVLY   E +R +A+ L  F+P   + + + + 
Sbjct: 416 VVRHGNRYVEENAPWSLAKAGDEARLNTVLYHLAETLRLVALQLMPFMPGKMSAMLNQIQ 475

Query: 479 VAD---ENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            A+   +   F S      LKPG    K   P+FPR 
Sbjct: 476 GAELMSQTLTFASHGGWGLLKPGHQCEKP-QPLFPRM 511


>gi|295105205|emb|CBL02749.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 665

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/515 (41%), Positives = 320/515 (62%), Gaps = 15/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           KG Y G Y    E+++ D ++  G       + Y+A         EE YFF+ S Y D+L
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTSKYADRL 172

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L  YE +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+
Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++
Sbjct: 233 NYISALGYGNETYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN
Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+V+M  K + G +         D  + ++ + +  ++  +M +  I +AL +
Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALME 412

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +++   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ 
Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKQRLESVLYHLCEALRVCGILLNAYLPTTAPKMM 472

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + L +              +  + +HK  + +FPR
Sbjct: 473 EQLGLDASALDLTKTTYGAQQTYTVHKG-EALFPR 506


>gi|160943218|ref|ZP_02090454.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445457|gb|EDP22460.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii
           M21/2]
          Length = 665

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/515 (41%), Positives = 320/515 (62%), Gaps = 15/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           KG Y G Y    E+++ D ++  G       + Y+A         EE YFF+ S Y D+L
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTSKYADRL 172

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L  YE +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+
Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++
Sbjct: 233 NYISALGYGNETYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN
Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLAN 352

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+V+M  K + G +         D  + ++ + +  ++  +M +  I +AL +
Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALME 412

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +++   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ 
Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKQRLESVLYHLCEALRVCGILLNAYLPTTAPKMM 472

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + L +              +  + +HK  + +FPR
Sbjct: 473 EQLGLDASALDLTKTTYGAQQTYTVHKG-EALFPR 506


>gi|323490978|ref|ZP_08096172.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395334|gb|EGA88186.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 652

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/510 (42%), Positives = 323/510 (63%), Gaps = 10/510 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI + A  AG
Sbjct: 8   FYITTPIYYPSGKFHIGTAYTTVASDAMARYKRLRGFDVRFLTGMDEHGQKIEEKANEAG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + FVD+ +   + +  V+DI+YDDFIRTTE+RH +    ++K   D GDIYKG Y G
Sbjct: 68  KAPQEFVDEMAAAAKQVWSVMDITYDDFIRTTEERHKEGVERIFKTFLDNGDIYKGEYEG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E+++ ++++  G           PVQ ++EE YFF +  Y  +LL YYE++ EF
Sbjct: 128 WYCTPCESFFTENQLENGNCPDC----GRPVQKVKEESYFFNMKKYASRLLEYYENNVEF 183

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+I+ F+K GL+DLS+SR +FDWGI +P DP++++YVW+DAL+NY+T+ GY 
Sbjct: 184 IEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIPVPGDPKHVIYVWVDALSNYITSLGYG 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K  K+SK
Sbjct: 244 SEDDSLFDKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKDGKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P  ++E  G+DA RYFL+RE+  G DG +  +   +R N DLAN +GNL++R+
Sbjct: 304 SKGNVVYPEMLVERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGNLLNRT 363

Query: 366 VSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           VSMI K   G++P      TE D  +  V ++ ++   + M+       L+++ +L+S  
Sbjct: 364 VSMINKYCGGVVPQINDLQTEFDAPLQQVAAQTVKAHEQYMEKMQFSIVLSEIWTLISRT 423

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L K     ++ ++V+    E +R  A++LQ F+P    +I + L + +E
Sbjct: 424 NKYIDETQPWVLAKDENAKEQLNSVMAHLAESLRMTAVMLQPFLPNAPKQIIEQLGLTEE 483

Query: 483 NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
              + +L    ++  G  +     PIFPR 
Sbjct: 484 FLAWATLQDFAKIPAGTQVVSKGTPIFPRL 513


>gi|317120932|ref|YP_004100935.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315590912|gb|ADU50208.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 677

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/514 (43%), Positives = 312/514 (60%), Gaps = 14/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI+T I YPN + HIGH Y  + AD LAR+HRL G D  F TGTDEHGQKI +AA+
Sbjct: 8   RGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDDTWFLTGTDEHGQKIERAAR 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG     ++D      + +   L ISYDDFIRT+E RH    + +++++ ++GDIYKG 
Sbjct: 68  KAGKEPLEYIDPIVEATKQLWHRLHISYDDFIRTSEPRHEQRVQQIFQRLYEQGDIYKGV 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    EAYY + E+    DGQ       PV+ ++EE YFFRLS Y   LL + E +
Sbjct: 128 YEGLYCTACEAYYTEAELL---DGQRCPVHETPVERLQEESYFFRLSKYAQPLLEHIERN 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV++F++ GL+DLS+SR +F WGI +P DP +++YVWIDAL NY+T  G
Sbjct: 185 PEFIQPPSRRNEVVAFIRQGLQDLSVSRTSFRWGIPVPFDPDHVIYVWIDALANYITALG 244

Query: 244 YLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +   PDG +  +FWPADLH+IGKDILRFHAI WPA L++   PLP+ V+ HG++L  G K
Sbjct: 245 W---PDGERYRRFWPADLHLIGKDILRFHAIIWPALLMALGEPLPRCVYGHGWLLIDGGK 301

Query: 303 ISKSL--GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           I KS   G VIDP+++IE+ GVD +RYFL+RE+  G DG Y +D L +R+N DLAN +GN
Sbjct: 302 IGKSRAGGQVIDPVQLIEKYGVDPVRYFLLREVPFGDDGSYSEDALVRRLNTDLANDLGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  R+  MI +  DG IP P     SD  + +     +  +   M    +  AL  +  L
Sbjct: 362 LAWRTTGMIQRFLDGRIPEPPG-AASDGVLAAAARETVARVERAMAGFDLPAALQAIWDL 420

Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y D Q PW L++    DR   VLY   E  R + +LL  F+ +   +++  L +
Sbjct: 421 IGRANKYIDEQAPWALRREGRRDRLEAVLYDVAETARVVGVLLSPFLVETPPRLWTQLGL 480

Query: 480 ADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510
             + R     + L+    PG +      P+FPR 
Sbjct: 481 GPDYRPAGWREGLEWGQLPGGVRVVRDQPLFPRI 514


>gi|99034647|ref|ZP_01314595.1| hypothetical protein Wendoof_01000592 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 471

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/474 (45%), Positives = 303/474 (63%), Gaps = 39/474 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D+ S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+    DG+        VQW++EE YFFRLS +Q+KLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESEL---IDGKAPTGAE--VQWIKEESYFFRLSNWQEKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266
           + G+         +FW                                    ++HVIGKD
Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSAANLADNSFNVHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQSLLK 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            E  L  C  +L ++  ++     +  +  +I++ SE + Y D   PW L KT+
Sbjct: 416 GEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTD 469


>gi|313115100|ref|ZP_07800588.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622577|gb|EFQ06044.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 665

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/515 (41%), Positives = 320/515 (62%), Gaps = 15/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           KG Y G Y    E+++ D ++  G       + Y+A         EE YFF+ S Y D+L
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGKCPDCGREVYDAH--------EEAYFFKTSKYADRL 172

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L  YE +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+
Sbjct: 173 LKLYEENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALS 232

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++
Sbjct: 233 NYISALGYGNEKYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWL 292

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN
Sbjct: 293 LMNGGKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALITRINSDLAN 352

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+V+M  K + G +         D  + ++ + +  ++  +M +  I +AL +
Sbjct: 353 DLGNLLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDSLTIPQALME 412

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +++   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ 
Sbjct: 413 IFAVIQRANKYIDETAPWALAKDEANKARLESVLYHLCEALRVCGILLNAYLPTTAPKMM 472

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + L +              +  + +HK  + +FPR
Sbjct: 473 EQLGLDASALDLTKTTYGAQETYTVHKG-EALFPR 506


>gi|281419111|ref|ZP_06250128.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407260|gb|EFB37521.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 654

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/513 (41%), Positives = 328/513 (63%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A
Sbjct: 2   DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K +VD+     +++  +L I+ D FIRTT+  H  T + ++KK+ D+GDIYK 
Sbjct: 62  KEKGVTPKQYVDEIVAGIKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++   ++    DG+  +     V+  +EE YFFRLS YQD+L+ + E 
Sbjct: 122 EYEGWYCTPCESFWTKTQL---VDGKCPDCGRE-VELTKEESYFFRLSKYQDRLIKHIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P+ R+NE+++ F++ GL+DL +SR TFDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 NPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             Y+   D    K+WPAD+H++GK+I+RFH I WPA L++   PLPK+VF HG++L +G 
Sbjct: 238 LNYMSEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++E+ GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVEKYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+V+MI K + G +P      E D+ ++   +   Q++ E +       AL ++   +
Sbjct: 358 VSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAI 417

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K+  N  R + VLY   E IR ++IL+Q F+P+   KI+  L +
Sbjct: 418 SRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGI 477

Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            D+        ++  + P        +P+FPR 
Sbjct: 478 NDKKYVEWETAKKWGVYPEGAAVNKGEPLFPRI 510


>gi|168187465|ref|ZP_02622100.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294617|gb|EDS76750.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 646

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/470 (44%), Positives = 315/470 (67%), Gaps = 7/470 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+A+ HIG+ Y  I AD +ARF RL G D  F TGTDEHGQKI + A+  G
Sbjct: 6   FYITTPIYYPSAKLHIGNTYTTIAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEGKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K +VD+   + +D+  ++++SYD FIRTT+  H +T + ++KK+ D+GDIYKG Y G
Sbjct: 66  ITPKAYVDEIVADIKDLWKIMNVSYDKFIRTTDDYHIETVQKIFKKLYDQGDIYKGEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y D+L+ Y ESHP+F
Sbjct: 126 LYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIEYIESHPDF 181

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+++ F++ GL+DL +SR +FDWGI +  D ++++YVWIDAL+NY+T  GY 
Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFDWGIPVSFDEKHVIYVWIDALSNYITALGYD 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K+SK
Sbjct: 242 QENDELYQKYWPANVHLVGKDILRFHTIYWPIMLIALDLPLPKQVFGHGWLLVDGGKMSK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ ++ E G D +RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNLV+R+
Sbjct: 302 SKGNVVDPVTLVNEFGTDPVRYYLLHEIPFGQDGMYTGETFIKKTNSDLANDLGNLVNRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI K +DG+IP P A  + D  ++ V     +++   M    I  AL ++ +LV   +
Sbjct: 362 IAMINKYFDGVIPAPKAEEDIDNDLIRVALEAPKKVEGKMDALKIPEALDEIWTLVRRSN 421

Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI
Sbjct: 422 KYIDETMPWALAKEEDKRERLGTVLYNLVEGLRIVSVMLSAFLPETSKKI 471


>gi|125974586|ref|YP_001038496.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004052|ref|ZP_05429037.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714811|gb|ABN53303.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991975|gb|EEU02072.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941704|gb|ADU75738.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 654

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/513 (41%), Positives = 328/513 (63%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A
Sbjct: 2   DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K +VD+     +++  +L I+ D FIRTT+  H  T + ++KK+ D+GDIYK 
Sbjct: 62  KEKGVTPKQYVDEIVAGIKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++   ++    DG+  +     V+  +EE YFFRLS YQD+L+ + E 
Sbjct: 122 EYEGWYCTPCESFWTKTQL---VDGKCPDCGRE-VELTKEESYFFRLSKYQDRLIKHIEE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P+ R+NE+++ F++ GL+DL +SR TFDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 NPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             Y+   D    K+WPAD+H++GK+I+RFH I WPA L++   PLPK+VF HG++L +G 
Sbjct: 238 LNYMSEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++E+ GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVEKYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+V+MI K + G +P      E D+ ++   +   Q++ E +       AL ++   +
Sbjct: 358 VSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAI 417

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K+  N  R + VLY   E IR ++IL+Q F+P+   KI+  L +
Sbjct: 418 SRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGI 477

Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            D+        ++  + P        +P+FPR 
Sbjct: 478 NDKKYVEWETAKKWGVYPEGAAVNKGEPLFPRI 510


>gi|262277217|ref|ZP_06055010.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224320|gb|EEY74779.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 500

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/507 (42%), Positives = 327/507 (64%), Gaps = 10/507 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K YI+T I YP+A+PH+GHAY  I +DV+ARF R+DG DV F TGTDEHG KI +AA+
Sbjct: 3   KKKFYITTPIYYPSAKPHMGHAYSSIASDVIARFKRIDGCDVSFLTGTDEHGLKIQRAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
                   F D+ S+ F D+++ L++S  DFIRTTE+RH +T + LW  + +   +Y   
Sbjct: 63  EHNSDPLSFCDKISQTFIDLSNTLNLSNTDFIRTTEERHKNTVKKLWSLLQENDQLYLSK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+ DEAYY ++EV +    +   +  + V WMEEE +FF+LS +Q  LL +Y+++
Sbjct: 123 YAGWYSVSDEAYYLENEVEEIDGKKISKSSGSEVTWMEEESFFFKLSEWQQPLLDFYKNN 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI P  R+NEVISF+  GLKDLS+SR TFDWGI +P++ +++MYVW+DALTNYL+ T 
Sbjct: 183 PNFIQPESRKNEVISFISGGLKDLSVSRTTFDWGIDVPNNKKHVMYVWLDALTNYLSATN 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y DN +G    FWPAD+H+IGKDILRFHA+YWPAFL++A LP+PK++F HG+IL   EK+
Sbjct: 243 YFDNHNG----FWPADVHIIGKDILRFHAVYWPAFLMAAKLPVPKQIFGHGWILSGEEKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN++DP+E+I + G D +RY+L++++  G DG  + D L+  +N DLAN IGNL +
Sbjct: 299 SKSKGNILDPLELINQYGSDEIRYYLMKDVIFGLDGKINIDNLRITLN-DLANNIGNLSN 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R  +++ K+Y+  +P        +  +L     ++Q I +      +H     + S  S 
Sbjct: 358 RIFTILNKNYECKVPQINDGYTINSDLLVDKKTIIQFIDK----YELHNYTKFIHSYSST 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +++Y +  +PW  K  +      +L+ T+  ++ + ILL   +P  + K    L + +  
Sbjct: 414 INKYVNDNEPWNKKNNSEQNIKNILFSTLVALKNIFILLYPVMPLASIKFLKSLNINENQ 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               +++++L     L K  D +F ++
Sbjct: 474 IKIDNINEKLTINDQLTKP-DILFKKY 499


>gi|330838376|ref|YP_004412956.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746140|gb|AEB99496.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 655

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/513 (42%), Positives = 330/513 (64%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YP+A+ HIGHAY   IAD +ARF RL   DV F TG+DEHGQKI + A+
Sbjct: 3   RKSFYITTPIYYPSAKLHIGHAYCTTIADAVARFKRLTDHDVFFLTGSDEHGQKIQQKAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT   +VD+    F+ +   L IS DDFIRTTE+RH    + ++++I +KGDIYKG 
Sbjct: 63  EEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKGK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+Y+ + ++   ADG+  +     V  +EE+ YFF++S Y D++L+Y E +
Sbjct: 123 YKGLYCTPCESYWTERQL---ADGKCPDCGRE-VAEVEEDAYFFKMSHYADRVLAYIEEN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI +P  P +++YVW DALTNYLT  G
Sbjct: 179 PDFIQPVSRRNEMINFIKQGLEDLCISRTSFDWGIPVPIAPDHVIYVWFDALTNYLTPIG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +LD+P+  + K+WPAD+H++GK+I+RFH+I WP  L++ +LPLPK V+ HG+++  G+K+
Sbjct: 239 FLDDPEKFE-KYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLIVDGDKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+++I+E G DA+RYFL+REI  G+DG + +D L  R+NADLAN +GNL+ 
Sbjct: 298 SKSKGNVVDPVQLIDEFGADAIRYFLLREINLGQDGNFSRDALITRINADLANDLGNLLH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K  DG++      +E D + L+     +      M+   +  A+    + +S 
Sbjct: 358 RTLNMIGKFQDGVVEEARGESEIDRAFLADAESAIAAYEREMEEMKLQSAIKTTWAFISR 417

Query: 424 VDRYFDAQKPW---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++Y D   PW   +         +  LY   E +R++++L++ F+P+ A KI+  L + 
Sbjct: 418 ANKYIDETMPWALAKDAAAKKQELTNTLYNLAESLRRISVLIEPFMPETAAKIWHQLGME 477

Query: 481 DENRCFQSLDQRLKPGFMLHK---TFDPIFPRF 510
            +    +  D R   GF+      + + +FPR 
Sbjct: 478 GDFSRVRFADVRTWGGFLAGTHVGSPEQLFPRI 510


>gi|322804348|emb|CBZ01898.1| methionyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 645

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 313/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T KV+VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471


>gi|118445100|ref|YP_879163.1| methionyl-tRNA synthetase [Clostridium novyi NT]
 gi|118135556|gb|ABK62600.1| methionyl-tRNA synthetase [Clostridium novyi NT]
          Length = 646

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/470 (44%), Positives = 314/470 (66%), Gaps = 7/470 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+A+ HIG+ Y  + AD +ARF RL G D  F TGTDEHGQKI + A+  G
Sbjct: 6   FYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEGKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K +VD+     +D+  V++ISYD FIRTT+  H +T + +++K+ DKGDIYKG Y G
Sbjct: 66  ITPKKYVDEIVAGIQDLWKVMNISYDKFIRTTDDYHVETVQKIFEKLYDKGDIYKGEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y D+L+ Y ESHP+F
Sbjct: 126 LYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIEYIESHPDF 181

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+++ F++ GL+DL +SR +FDWGI +  D ++++YVWIDAL+NY+T  GY 
Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFDWGIPVSFDEKHVIYVWIDALSNYITALGYD 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K+SK
Sbjct: 242 QENDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ ++ E G D +RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNLV+R+
Sbjct: 302 SKGNVVDPVTLVNEFGTDPVRYYLLHEIPFGQDGMYTGETFIKKTNSDLANDLGNLVNRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI K +DG+IP P A  + D  ++ V     +++   M    I  AL ++ +LV   +
Sbjct: 362 IAMINKYFDGVIPAPKAEEDIDNDLIRVALEAPKKVEGKMDALKIPEALDEIWTLVRRSN 421

Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI
Sbjct: 422 KYIDETMPWALAKEEDKRERLGTVLYNLVESLRIVSVMLSAFLPETSKKI 471


>gi|314932712|ref|ZP_07840082.1| methionine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654542|gb|EFS18294.1| methionine--tRNA ligase [Staphylococcus caprae C87]
          Length = 657

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/524 (42%), Positives = 334/524 (63%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI +
Sbjct: 1   MMAKDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY
Sbjct: 61  KAQKAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            G Y GWYS+ DE YY +    D VY+  +   G+  ++ H  V+ ++EE YFF ++ Y 
Sbjct: 121 LGEYEGWYSVPDETYYTESQLVDPVYENGEIIGGKSPDSGHE-VELVKEESYFFNINKYT 179

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWI
Sbjct: 180 DRLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWI 239

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+
Sbjct: 240 DALVNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N 
Sbjct: 300 HGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNLV+R++SMI K + G +P   G   E DE + ++    ++   ENM++    
Sbjct: 360 DLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFS 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ V   +S  ++Y D  +PW L K     D    V+   VE IR  A+LLQ F+   
Sbjct: 420 VALSTVWKFISRTNKYIDETQPWVLAKDENQRDMLGNVMAHLVENIRFAAVLLQPFLTHA 479

Query: 470 ANKIFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             ++F  L + D     F+SL+    L    ++ +   PIFPR 
Sbjct: 480 PREVFKQLNMNDPKLSQFESLESYGALTEPILVTEKPTPIFPRL 523


>gi|170758335|ref|YP_001785405.1| methionyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405324|gb|ACA53735.1| methionine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 645

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 313/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAEKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +D+  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKAYVDEIVAGIKDLWKIMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 ENDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGADPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ E+M+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEEDMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY  VE +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWVLAKDESKKERLGTVLYNLVESLRIISVCISAFIPETSIKI 471


>gi|126654257|ref|ZP_01726045.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           B14905]
 gi|126589290|gb|EAZ83448.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           B14905]
          Length = 658

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/518 (43%), Positives = 332/518 (64%), Gaps = 12/518 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E++K  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI 
Sbjct: 1   MSEQKKTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A  AG   + +V++ +   + +  ++DISYDDFI+TT++RH      +++K  D GDI
Sbjct: 61  EKAAEAGKHPQDYVNEIAEAAKKLWALMDISYDDFIQTTQERHTKAVEKIFQKFLDNGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y GWY    E+++ + ++    DG   +    PV  ++EE YFF +  Y D+LLSY
Sbjct: 121 YKGEYEGWYCTPCESFFTETQL---VDGNCPDCGR-PVHKVKEESYFFNMKKYADRLLSY 176

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +  FI P  R+NE+I+ F+K GL+DLS+SR +FDWGIK+P DP++++YVW+DALTNY
Sbjct: 177 YEENLGFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GYL + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ 
Sbjct: 237 ITSLGYLSDDETLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNVI P  +IE  G+DA RYFL+RE+  G DG +  +   +R N DLAN +
Sbjct: 297 KDGKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++SMI K YDG+IP+     TE D ++      V  +  E+M+       LA +
Sbjct: 357 GNLLNRTISMINKYYDGIIPSENLQSTEFDAALKEQAESVRIKYEESMEKMQFSVVLADL 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +LVS  ++Y D  +PW L K   D+    +V+    E + Q+A++LQ F+  +  ++ +
Sbjct: 417 WTLVSRTNKYIDETQPWVLAKEEADKPKLGSVMRNLAESLHQIAVMLQPFMTTIPKRMME 476

Query: 476 ILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510
            L + D+   + +++     +     + +   PIFPR 
Sbjct: 477 QLGLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 514


>gi|95930673|ref|ZP_01313407.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133325|gb|EAT14990.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 510

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/509 (42%), Positives = 315/509 (61%), Gaps = 9/509 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N  PHIGHAY  +  DVLAR+ +  G +V F TGTDEHGQK+ KAA  
Sbjct: 3   KTFYITTPIYYVNDVPHIGHAYTTLACDVLARYKKARGYEVFFLTGTDEHGQKVEKAAIA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T     D+  + F  +   L+I   DFIRTT++RH +  + ++ +I ++GDIY G Y
Sbjct: 63  AGETPLELADRVMQRFAALWQKLNIDNTDFIRTTQQRHKEGVQKMFTQIQEQGDIYLGAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
             WY    E ++ + ++  G           P   ++EE YFFR+S YQ +LL + E++P
Sbjct: 123 EDWYCTPCETFWTETQLIDGCCPDC----GRPTDKLKEESYFFRMSKYQQQLLDHIEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFV+ GL+DLS+SR +F WGI +P D ++++YVW DAL NY+T  GY
Sbjct: 179 DFIQPRSRRNEVLSFVREGLRDLSISRTSFSWGIPVPGDDKHVIYVWFDALNNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+  G+  KFWP  +HVIGKDILRFH +YWP FL++A LPLP+KVF+HG+   +G+K+S
Sbjct: 239 PDDKQGTFEKFWPCSVHVIGKDILRFHTVYWPTFLMAAGLPLPEKVFAHGWWTVEGKKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL NV++P  +++  G+D +RYFL+RE+  G DG +    L  R+N+DLAN +GNLVSR
Sbjct: 299 KSLQNVVEPNMLVDTYGIDPIRYFLLREVPFGLDGDFSHSALIHRINSDLANDLGNLVSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S +M+ K + G +P P A  + D+  +      L+ I + M +   ++AL  +  L+S  
Sbjct: 359 STAMLNKYFGGTLPEPTAMADIDQPFIDQFPAKLELIDKQMNDLAFNKALLSIWELISSA 418

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K     +R  TV+Y  +E +R + +++  F+P    +I +IL    +
Sbjct: 419 NKYIDDTAPWGLAKDEAQKERLGTVMYNLLEAVRLIGLMVAPFLPDTGKRIMEILGQDSD 478

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509
           N      DQ   L+ G  + K   P+FPR
Sbjct: 479 NLMLDGQDQWGGLQAGTTIEKA-PPMFPR 506


>gi|291288265|ref|YP_003505081.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885425|gb|ADD69125.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 644

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/478 (44%), Positives = 305/478 (63%), Gaps = 6/478 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  +  D ++R+ RL G DV F TGTDEHGQKI +AAQ  G
Sbjct: 6   FYVTTPIYYVNDVPHIGHAYTTVACDTISRYKRLCGFDVCFLTGTDEHGQKIEQAAQKRG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   D+  + F  +  +L+IS D FIRTT++ H    R ++ K+ + GDIY   Y G
Sbjct: 66  ITPKALADEVVQRFAGLWKILNISNDKFIRTTDELHKKAVRKIFDKMKENGDIYLDHYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E Y  + ++    DG    +       ++E  YFFR+S Y D+LL + E + +F
Sbjct: 126 WYCTPCETYLTETQLL---DGNCCPSCGRETAKLKEPSYFFRMSKYADQLLKHIEDNKDF 182

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           + P  RRNE+ISF+K GL+DLS+SR TF WGI +PD P++++YVWIDALTNY+   GY +
Sbjct: 183 VRPESRRNEIISFIKDGLRDLSVSRVTFKWGIPVPDAPEHVIYVWIDALTNYIAALGYGE 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           + D    KFWPAD HV+GKDILRFH +YWP  L+SA LPLPK VF+HG+   +G+K+SKS
Sbjct: 243 D-DADFQKFWPADYHVVGKDILRFHTVYWPTMLMSAGLPLPKSVFAHGWWTVEGQKMSKS 301

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP  ++++ GVD++RYFL+RE+  G DG +    L  R+N DLAN +GNL++R++
Sbjct: 302 LGNAIDPAWLVDKFGVDSIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGNLLNRTM 361

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            M+ + +DG++P      + D+ +     RV +E+ E++ N   ++AL     LVS +++
Sbjct: 362 GMVNRYFDGVVPAYTEAGDEDKPLEETIERVFREVDEHITNMAFNKALMTTWELVSALNK 421

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           Y D   PW L K  T   R  +VLY  ++ IR +++LL  F+P+ A K+   L  A E
Sbjct: 422 YIDETAPWALAKDETRKGRLGSVLYSVLDGIRLVSLLLYPFMPETAVKMRRQLGTAQE 479


>gi|289450466|ref|YP_003475749.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185013|gb|ADC91438.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 672

 Score =  435 bits (1118), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/512 (42%), Positives = 321/512 (62%), Gaps = 12/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YIST I Y +   HIGH+Y  + AD +AR+ R+ G DV F TGTDEHG+KI + A+ 
Sbjct: 3   KKFYISTPIYYTSGNLHIGHSYSTVAADAMARYKRMAGNDVFFLTGTDEHGEKIQERAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FVD+     +D+  + +ISYD FIRTT+  H    + + +K+ D+GDIYK  Y
Sbjct: 63  AGKTPQAFVDELVSGIKDLWKLFNISYDKFIRTTDAEHMAGVKYIVQKLYDRGDIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    EA++ + ++  G           PV   +EE YFFRLS Y D+L+  +E HP
Sbjct: 123 EGWYCTPCEAFWTESQLKDGCCPDC----GRPVHKTKEESYFFRLSKYNDRLIKLFEEHP 178

Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EF+ P  R NE+++ F++ GL+DL++SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 179 EFVQPESRANEMLNNFLRPGLQDLAISRTSFDWGIKVPFDPKHVVYVWIDALSNYITALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +N      KFWPAD+H++GK+I+RFH I WPA L++ +LPLPK+V+ HG+IL K  K+
Sbjct: 239 YPEN-TAKFEKFWPADVHLVGKEIVRFHTIIWPALLMALDLPLPKQVYGHGWILFKEGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN++DP+ +     VDA+RYFL+RE+  G DG Y  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNIVDPVVLCNRYTVDAIRYFLLREVPFGADGSYSNEALITRINSDLANDLGNLMS 357

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           R+++MI K + G +P  TP   +E DE +    S V       M       AL +V  L+
Sbjct: 358 RTIAMICKYFAGKLPPATPSINSE-DERLRETASEVAASYVSYMDKMQFSLALGEVWRLI 416

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + ++Y D   PW L K  T  +R + VL    EV+R ++I +  F+P+ A K+   L +
Sbjct: 417 GQANKYIDVTMPWLLAKDPTKQERLAAVLCNLGEVLRLVSIYIAPFMPETAEKMQAALHL 476

Query: 480 ADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
            +  + F SL++  L        T +P+FPR 
Sbjct: 477 TEAQKAFSSLNRFDLFATEQPLSTCEPLFPRL 508


>gi|315640002|ref|ZP_07895129.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484264|gb|EFU74733.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 669

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/521 (42%), Positives = 327/521 (62%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD+ + + + +   LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KADELGVTPQEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHQKAVKKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGQYEGWYSISDEEYFTETQLAEVYKDEEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL+YY+ HPEFI P  R+NE+I+ F+K GL+DL++SR T  WGI +  +P++++YVWID
Sbjct: 181 RLLAYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTHSWGIPVDANPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPK+V+ H
Sbjct: 241 ALSNYISALGYGSDDDQLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALGLPLPKEVYGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKEGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVARVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K  DG++PT     T  D  + +  + V+   RE M N     
Sbjct: 361 LANDLGNLLNRTVAMINKYCDGIVPTYRSKVTPFDSELSTTAANVIGRYREAMDNMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA+V +LVS  ++Y D  +PW L K    +A   +V+    E +R +A+LLQ  + +  
Sbjct: 421 ALAEVWTLVSRANKYIDETQPWILAKDEEKKAELDSVMIHLAESLRIVALLLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
            KIF+ L +         L     P    + +   PIFPR 
Sbjct: 481 AKIFEQLGLKQMATSLTDLRFGEFPAETKVVEKGTPIFPRL 521


>gi|187777332|ref|ZP_02993805.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
           15579]
 gi|187774260|gb|EDU38062.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
           15579]
          Length = 645

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 310/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+  GV
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +D+  +++I YD FIRTT+  H +  + ++K + DKGDIYK  Y GW
Sbjct: 67  TPKAYVDEIVAGIKDLWKMMNIDYDKFIRTTDDYHVELVQKIFKTLCDKGDIYKSEYEGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++ +G           PV+  +EE YFF++S Y  KL+ Y ESHP+FI
Sbjct: 127 YCTPCESFWTETQLVEGKCPDC----GRPVEKAKEEAYFFKMSKYAPKLIEYIESHPDFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+I+ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMINNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    ++WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKRYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPEGNCKEDIDEDLIKLALETPRKVEENMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY  VE +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLVESLRIISVCISAFIPETSIKI 471


>gi|222152165|ref|YP_002561325.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121294|dbj|BAH18629.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 654

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/517 (42%), Positives = 333/517 (64%), Gaps = 14/517 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI + AQ AG
Sbjct: 6   FYVTTPIYYPSGKLHIGHAYSTVAGDAIARYKRMQGYDVKYLTGTDEHGQKIQEKAQAAG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            +   ++D+   + + +   LDIS DDFIRTTE RH      +++++ ++GDIY G Y G
Sbjct: 66  KSEIEYLDEIIADIQALWKKLDISNDDFIRTTEDRHKVVVEKIFERLLEQGDIYLGDYEG 125

Query: 127 WYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           WYS+ DE +Y +    D +Y+G     G+  ++ H PVQ ++EE YFF+LS Y D+L+ Y
Sbjct: 126 WYSVPDETFYTETQLVDPIYEGEKIVGGKSPDSGH-PVQLVKEESYFFKLSKYTDRLIEY 184

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y++HPEFILP+ R+NE+++ F+K GL+DL++SR +FDWGIK+P +P++++YVWIDALTNY
Sbjct: 185 YDAHPEFILPVSRKNEMLNNFIKPGLEDLAVSRTSFDWGIKVPSNPKHVVYVWIDALTNY 244

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GYL   +    K+WPAD+H++ K+I+RFH I WPA L++ +LPLPKK+F+HG+IL 
Sbjct: 245 ISALGYLSEDETEFNKYWPADVHIMAKEIVRFHTIIWPALLMALDLPLPKKIFAHGWILM 304

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP  +I+  G+DA+RY+L+RE+  G DG +  +   +R N DLAN +
Sbjct: 305 KDGKMSKSKGNVVDPHVLIDRYGLDAVRYYLMRELPFGSDGVFTPEAFVERTNFDLANDL 364

Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+++MI K +DG +    G     D  I  +     +     M++     AL +V
Sbjct: 365 GNLVNRTIAMINKYFDGNLTGYKGQMHAVDAEIEDLAVATKKAYDNAMESMQYSVALQEV 424

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+S  ++Y D   PW L K  +  +   +V+Y  VE IR  A+LL+ F+ +   KIF+
Sbjct: 425 WKLISRTNKYIDETTPWILIKDASQKELLESVMYHLVENIRFAAVLLRPFLTEAPYKIFE 484

Query: 476 ILFVADEN-RCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
            L + D     F SL+   +     + +   PIFPR 
Sbjct: 485 QLNLKDNALYGFDSLNTYGQIAELKVVEKATPIFPRL 521


>gi|299536738|ref|ZP_07050048.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727852|gb|EFI68417.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 658

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/518 (43%), Positives = 328/518 (63%), Gaps = 12/518 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E++K  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI 
Sbjct: 1   MSEQQKTFYITTPIYYPSGKFHIGTAYTTVASDTIARYKRLKGYDVRFLTGMDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A  AG   + +V++ +   + +  ++DISYDDFI+TT+ RH      +++K  D GDI
Sbjct: 61  EKAAEAGKHPQDYVNEIADAAKKLWGLMDISYDDFIQTTQDRHTKAVEKIFQKFLDNGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y GWY    E+++ + ++    DG   +    PV  ++EE YFF +  Y D+LL+Y
Sbjct: 121 YKGEYEGWYCTPCESFFTETQL---VDGNCPDCGR-PVHKVKEESYFFNMKKYADRLLAY 176

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE + EFI P  R+NE+I+ F+K GL+DLS+SR +FDWGIK+P DP++++YVW+DALTNY
Sbjct: 177 YEENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GYL   +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ 
Sbjct: 237 ITALGYLSEDESLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNVI P  +IE  G+DA RYFL+RE+  G DG +  +   +R N DLAN +
Sbjct: 297 KDGKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++SMI K +DG+IPT     TE D ++      V  +  E+M+       LA +
Sbjct: 357 GNLLNRTISMINKYFDGIIPTENLQPTEFDAALKEQAESVRIKYEESMEKMQFSVVLADL 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +LVS  ++Y D  +PW L K   D+     V+    E + Q+A++LQ F+     ++ D
Sbjct: 417 WTLVSRTNKYIDETQPWVLAKEESDKPKLGAVMRNLAESLHQIAVMLQPFMTTTPKRMID 476

Query: 476 ILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510
            L + D+   + +++     +     + +   PIFPR 
Sbjct: 477 QLGLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 514


>gi|329929628|ref|ZP_08283327.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328936005|gb|EGG32459.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 662

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/517 (42%), Positives = 330/517 (63%), Gaps = 12/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MADKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +D+   LDIS +DFIRTTEKRH    + +++++  + DIY
Sbjct: 61  KAAEAGKTPQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQEVFERLLKQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ + ++  G           PV+ ++EE YFFR+S Y D+LL YY
Sbjct: 121 KGEYEGWYCTPCESFFLERQLVNGNCPDC----GRPVELVKEESYFFRMSKYVDRLLQYY 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E +P+FI P+ R+NE+I+ F+K GL+DL++SR T++WG+K+  DP++++YVWIDAL NY+
Sbjct: 177 EENPDFIQPVSRKNEMINNFIKPGLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY         K+WPAD+H++ K+I+RFH IYWP  L++ ++PLPKKVF+HG++L K
Sbjct: 237 TALGYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMK 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +RVN+DLAN +G
Sbjct: 297 DGKMSKSKGNVVDPVTMIDRYGLDALRYYLLREVPFGADGTFTPESFVERVNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+V+M+ K +DG +P      T  D +I      V  ++   M+N     AL  + 
Sbjct: 357 NLLNRTVAMVDKYFDGEVPAFSAGVTPFDAAIEEAAKSVYDKVETAMENMEFSVALTAIS 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             VS  ++Y D  +PW L K    R   ++V+   VE +R  +ILLQ F+ +   K+++ 
Sbjct: 417 QFVSRSNKYIDETQPWTLAKDESKRHELASVMSHLVETLRIASILLQPFLTRTPKKMWEQ 476

Query: 477 LFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           L +A+ E   ++S  Q   +  G  L K  +PIFPR 
Sbjct: 477 LGLAEGELTTWESGRQLGAIPAGTKLQKG-EPIFPRL 512


>gi|168177409|ref|ZP_02612073.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670464|gb|EDT82438.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 645

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 312/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471


>gi|331270594|ref|YP_004397086.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329127144|gb|AEB77089.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 646

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 314/470 (66%), Gaps = 7/470 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+A+ HIG+ Y  + AD +ARF RL G D  F TGTDEHGQKI + A+  G
Sbjct: 6   FYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEAKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K +VD+     +D+  V++++YD FIRTT+  H +T + ++KK+ D+GDIYKG Y G
Sbjct: 66  ITPKEYVDEIVAGIKDLWKVMNVNYDKFIRTTDDYHVETVQKIFKKLYDQGDIYKGEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y D+L+ Y E HPEF
Sbjct: 126 LYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIKYIEYHPEF 181

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+++ F++ GL+DL +SR +F+WGI +  D ++++YVWIDALTNY+T  GY 
Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFNWGIPVSFDEKHVIYVWIDALTNYITALGYN 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K+SK
Sbjct: 242 QDNDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ ++   G DA+RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNLV+R+
Sbjct: 302 SKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGMYTSETFIKKTNSDLANDLGNLVNRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI K +DG+IP P A  + D+ ++ +      ++   M    I  AL ++ +LV   +
Sbjct: 362 IAMINKYFDGIIPVPTAKDDIDDELIKIALEAPGKVEAKMDELKIPEALDKIWTLVRRSN 421

Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI
Sbjct: 422 KYIDETMPWALAKEEDKKERLGTVLYNLVESLRIVSVMLSAFLPETSKKI 471


>gi|168182315|ref|ZP_02616979.1| methionine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793393|ref|YP_002860945.1| methionyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674668|gb|EDT86629.1| methionine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262065|gb|ACQ53098.1| methionine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 645

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 312/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCISRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471


>gi|261405922|ref|YP_003242163.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282385|gb|ACX64356.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 662

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/517 (42%), Positives = 330/517 (63%), Gaps = 12/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MADKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +D+   LDIS +DFIRTTEKRH    + +++++  + DIY
Sbjct: 61  KAAEAGKTPQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQDVFERLLKQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ + ++  G           PV+ ++EE YFFR+S Y D+LL YY
Sbjct: 121 KGEYEGWYCTPCESFFLERQLVNGNCPDC----GRPVELVKEESYFFRMSKYVDRLLQYY 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E +P+FI P+ R+NE+I+ F+K GL+DL++SR T++WG+K+  DP++++YVWIDAL NY+
Sbjct: 177 EENPDFIQPVSRKNEMINNFIKPGLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY         K+WPAD+H++ K+I+RFH IYWP  L++ ++PLPKKVF+HG++L K
Sbjct: 237 TALGYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMK 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +RVN+DLAN +G
Sbjct: 297 DGKMSKSKGNVVDPVTMIDRYGLDALRYYLLREVPFGADGTFTPESFVERVNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+V+M+ K +DG +P      T  D +I      V  ++   M+N     AL  + 
Sbjct: 357 NLLNRTVAMVDKYFDGEVPAFSAGVTPFDAAIEEAAKSVYDKVETAMENMEFSVALTAIS 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             VS  ++Y D  +PW L K    R   ++V+   VE +R  +ILLQ F+ +   K+++ 
Sbjct: 417 QFVSRSNKYIDETQPWTLAKDESKRHELASVMSHLVEALRIASILLQPFLTRTPKKMWEQ 476

Query: 477 LFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           L +A+ E   ++S  Q   +  G  L K  +PIFPR 
Sbjct: 477 LGLAEGELTTWESGRQLGAIPAGTKLQKG-EPIFPRL 512


>gi|226947300|ref|YP_002802391.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841497|gb|ACO84163.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 645

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 312/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471


>gi|291166390|gb|EFE28436.1| methionine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 642

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/489 (42%), Positives = 322/489 (65%), Gaps = 8/489 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+ + HIGH Y  + AD ++R+ R  G DV F TGTDEHG+KI K A+
Sbjct: 3   KKTFYVTTPIYYPSGRLHIGHTYTTVAADAISRYKRFAGFDVRFLTGTDEHGEKIQKKAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+   +++D    + + + +V++ISYDDFIRTTE RH +  + +++K+ D+GDIY G 
Sbjct: 63  EMGLEPIIYLDNMISDIKKLWNVMEISYDDFIRTTESRHEERVQKIFQKLYDQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  EA++ + ++    D +  +  H  V+  +E+ YFFRLS YQD+L+ YYE H
Sbjct: 123 YEGHYCVECEAFWTESQL---EDNKCPDC-HREVESKKEQSYFFRLSKYQDRLIEYYEQH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+F  P  R+NE+++ F+K GL+DLS+SR +FDWG+K+P D ++++YVWIDAL NY+T  
Sbjct: 179 PDFCFPESRKNEMLNNFLKKGLEDLSVSRTSFDWGVKVPFDERHVIYVWIDALCNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY DN    +A +WPA++ ++GK+I+RFH I WPA L++ +LPLP+KV+ HG+IL   +K
Sbjct: 239 GYPDNTKEMQA-YWPANMQIVGKEIMRFHTIIWPALLMALDLPLPQKVYGHGWILFSDDK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+DAL+YFL+RE   G+DG Y   G   R+N+DL N +GNL+
Sbjct: 298 MSKSKGNVVYPEPIIERYGIDALKYFLLREFVFGQDGNYTNRGFLTRINSDLVNDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+VSM+ K  DG++    A TE DES+ ++ + + ++  E M+N   + A  ++  LV 
Sbjct: 358 SRTVSMVEKYTDGIVMEYNASTEFDESLETIINELFEKFDEAMENMQFNEAFEELWKLVR 417

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW+L K  T  +   +VLY  +E +R +A+ L+  +   ++KI + + + 
Sbjct: 418 RANKYIDETMPWKLAKDDTKQEELRSVLYHLIETLRVVAVFLRPMLTITSDKILEQINIP 477

Query: 481 DENRCFQSL 489
            E     S+
Sbjct: 478 VEEATLDSV 486


>gi|169825668|ref|YP_001695826.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168990156|gb|ACA37696.1| Methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 663

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/516 (42%), Positives = 331/516 (64%), Gaps = 11/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI + 
Sbjct: 8   EQKKTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQEK 67

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG   + +V++ + + + +  ++DI+YDDFI+TT++RH      +++K  D GDIYK
Sbjct: 68  AAEAGKHPQDYVNEIAESAKKLWALMDITYDDFIQTTQERHTKAVEKIFQKFLDNGDIYK 127

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++    DG   +    PV  ++EE YFF +  Y D+LL+YYE
Sbjct: 128 GEYEGWYCTPCESFFTETQL---VDGNCPDCGR-PVHKVKEESYFFNMKKYADRLLAYYE 183

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            + EFI P  R+NE+I+ F+K GL+DLS+SR +FDWGIK+P D ++++YVW+DALTNY+T
Sbjct: 184 ENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDAKHVIYVWVDALTNYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           + GYL + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K 
Sbjct: 244 SLGYLSDDETLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKD 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI P  +IE  G+DA RYFL+RE+  G DG +  +   +R N DLAN +GN
Sbjct: 304 GKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R++SMI K +DG+IP+     TE D ++      V  +  E+M+       LA + +
Sbjct: 364 LLNRTISMINKYFDGIIPSENLQSTEFDAALKEQAESVRIKYEESMEKMQFSVVLADLWT 423

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LVS  ++Y D  +PW L K   D+    TV+    E + Q+A++LQ F+     ++ + L
Sbjct: 424 LVSRTNKYIDETQPWVLAKEEADKPKLGTVMRNLAESLHQIAVMLQPFMTTTPKRMMEQL 483

Query: 478 FVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510
            + D+   + +++     +     + +   PIFPR 
Sbjct: 484 GLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 519


>gi|82750197|ref|YP_415938.1| methionyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|82655728|emb|CAI80127.1| ethionyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 657

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 329/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISSLGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|163791030|ref|ZP_02185451.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873675|gb|EDP67758.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 675

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/523 (41%), Positives = 326/523 (62%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG+AY  I  DV+AR+ R+   DV + TG+DEHGQKI  
Sbjct: 1   MTEKKTFYITTPIYYPSGKLHIGNAYSTIACDVMARYKRMQDFDVFYLTGSDEHGQKIEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ   +T + +VD+ ++  +++ ++L+IS D FIRTT+  H      ++++   +GDIY
Sbjct: 61  KAQELNITPQEYVDEMAKGMQNLWELLEISNDKFIRTTDPIHEKVVADIFERFLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE +Y + +   V + A+G     +     +PV+ ++EE YFFR+S Y 
Sbjct: 121 LDEYEGWYSVPDETFYTETQLVDVERDAEGTIIGGKSPDSGHPVELIKEESYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL+YY  HP+FI P  R+NE+I+ F+K GL+DL++SR TF WG+K+P +P++++YVWI
Sbjct: 181 DRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKHVIYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+T  GY  +      KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F 
Sbjct: 241 DALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+ P  ++E+ G+DALRY+L+RE+  G DG +  +    RVN 
Sbjct: 301 HGWLLMKEGKMSKSKGNVVYPEMLVEQYGLDALRYYLMREVTFGSDGVFTPEDFVSRVNY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+++MI K +DG +P   G  TE D  +     +V    +E M+N    
Sbjct: 361 DLANDLGNLLNRTIAMINKYFDGKVPDYTGNVTEFDAVLKETAEKVCTNYQEEMENMQFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ V  L+S  ++Y D   PW+L K     +  ++V+    E +R  AILLQ F+   
Sbjct: 421 SALSHVWVLISRANKYIDETAPWKLAKEEDQKNELASVMVHLAETLRISAILLQPFLTHA 480

Query: 470 ANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             ++F  L V  E     S  Q         + K   PIFPR 
Sbjct: 481 PKEVFAQLGVEGEFAGDWSTIQFGSFPTNTTVIKKGTPIFPRL 523


>gi|148378083|ref|YP_001252624.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931420|ref|YP_001382482.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936823|ref|YP_001386034.1| methionyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148287567|emb|CAL81631.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927464|gb|ABS32964.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932737|gb|ABS38236.1| methionine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 645

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 313/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T KV+VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +   + V+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGRS-VEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYST 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKI 471


>gi|253575851|ref|ZP_04853186.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844894|gb|EES72907.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 673

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/524 (42%), Positives = 328/524 (62%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI++ I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MSNKPTFYITSPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T + FVD      + + + LDISYDDFIRTTE RH      ++ ++  +GDIY
Sbjct: 61  KAKEKGQTPQQFVDGIVAGIKQLWEKLDISYDDFIRTTEPRHKQVVEAIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173
           KG Y GWYS+ DE YY + +   V +   G+    +     + V+ ++EE YFFR+S Y 
Sbjct: 121 KGEYEGWYSIPDETYYTESQLVDVIRNEKGEVIGGKSPESGHAVELVKEECYFFRMSKYV 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWG+K+  DP++++YVWI
Sbjct: 181 DRLLKFYEENPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  +      ++WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF 
Sbjct: 241 DALSNYITALGYGTDNQELFERYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L KG K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +RVN+
Sbjct: 301 HGWLLMKGGKMSKSKGNVVDPNVLIDRYGLDATRYYLLREVPFGSDGSFTPESFVQRVNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           DLAN +GNL++R+V+M+ K + G +P   P A T  D  +       ++++ E M+N   
Sbjct: 361 DLANDLGNLLNRTVAMMEKYFGGEVPAYEPNA-TAFDAELEQAALDTVRKVEEVMENMGF 419

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468
             AL  + + +S  ++Y D  +PW L K    +   ++V+    E +R  +ILLQ F+ +
Sbjct: 420 SVALTHIGAFISRTNKYIDETQPWVLAKDEAKKGELASVMAHLAESLRIASILLQPFLTQ 479

Query: 469 LANKIFDILFVA-DENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
              KI+  L +A  E   ++S     L P        +PIFPR 
Sbjct: 480 APAKIWAQLGIAPGELTTWESAKTFGLIPAGTKLVKGEPIFPRL 523


>gi|325288365|ref|YP_004264546.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963766|gb|ADY54545.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 655

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/515 (43%), Positives = 324/515 (62%), Gaps = 20/515 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YPNA PHIG AY  I AD +AR  R+ G DV F TGTDE+ QKI + A++ 
Sbjct: 2   KYYITTPIYYPNASPHIGTAYTTIAADAMARLRRMMGDDVYFLTGTDENAQKIVRTAESK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +VD     F+++  +LDIS DDFIRTTE+RH    +  + K+ ++GDIYK  Y 
Sbjct: 62  GMAPLDYVDNIVAKFKELWRILDISNDDFIRTTEERHAKVVQHFFTKLFEQGDIYKSEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY    E ++ ++ + +G        +   V+ ++EE YFFRLS YQD+LL Y +++PE
Sbjct: 122 GWYCTPCETFWTENRLVEGRCPNLDCGRE--VELLKEESYFFRLSKYQDRLLEYIKANPE 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P+ RRNE+I F++SGL+DL ++R TF+WGI++P DP++++YVW+DAL NY++  GY 
Sbjct: 180 FIQPVSRRNEMIKFIESGLEDLCVTRTTFEWGIQVPFDPKHVVYVWLDALINYISALGY- 238

Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
             PDG K  ++WPADLH++GKDI+RFH + WP  L++  +PLPKKVF HG+ + K G KI
Sbjct: 239 --PDGEKYQRYWPADLHLVGKDIVRFHTVIWPIILMAMEIPLPKKVFGHGWFMSKEGGKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV D  E+I   G D +RYFL++E+  G DG Y +D L +++N+DLAN +GN +S
Sbjct: 297 SKSRGNVQDSFELIARYGSDPIRYFLLKEMQYGLDGTYSEDDLVEKLNSDLANDLGNFIS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++M+ K  DG++P PG  +  D+ +  +   V   I E M +    +A+  +   VS 
Sbjct: 357 RSLAMVEKYRDGIVPEPGEDSVLDKELKELAVSVKTGIEEKMLDCDTAKAIEYLWQFVSR 416

Query: 424 VDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++Y D   PW L + +P+   R  TVLY  +E IR L +    F+P +  K+  +L   
Sbjct: 417 CNKYVDETAPWALAR-DPEQKCRLDTVLYNLIEAIRILGVFCAPFMPGIPLKLQPLL--- 472

Query: 481 DENRCFQSLDQRLK-----PGFMLHKTFDPIFPRF 510
           +    F   +   K     PG  + K  DPIFPR 
Sbjct: 473 NSGNLFTKWNDAGKWKIIVPGTKVIKG-DPIFPRI 506


>gi|302332203|gb|ADL22396.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 657

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|253680951|ref|ZP_04861754.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562800|gb|EES92246.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 646

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 311/470 (66%), Gaps = 7/470 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+A+ HIG+ Y  + AD +ARF RL G D  F TGTDEHGQKI + A+  G
Sbjct: 6   FYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAEAKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K +VD+     +D+  V+++ YD FIRTT+  H +T + ++KK+ DKGDIYKG Y G
Sbjct: 66  ITPKEYVDEIVSGIKDLWKVMNVKYDKFIRTTDDYHVETVQKIFKKLYDKGDIYKGEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E+++ + ++  G       A    V+  +EE YFF++S Y D+L+ Y E+H EF
Sbjct: 126 LYCTPCESFWTETQLVDGKCPDCGRA----VEKTKEEAYFFKMSKYADRLIEYIETHSEF 181

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P  R+NE+++ F++ GL+DL +SR +F+WGI +  D ++++YVWIDALTNY+T  GY 
Sbjct: 182 IQPESRKNEMLNNFLRPGLQDLCISRTSFNWGIPVSFDEKHVIYVWIDALTNYITALGYN 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K+SK
Sbjct: 242 QDNDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGKMSK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP+ ++   G DA+RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNLV+R+
Sbjct: 302 SKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGMYTSETFIKKTNSDLANDLGNLVNRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI K +DG+IP P A  + D+ ++ V   + + +   M    I  AL ++ +LV   +
Sbjct: 362 IAMINKYFDGVIPAPTAKDDIDDELIKVALEIPERVERKMDLLKIPEALDEIWTLVRRSN 421

Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI
Sbjct: 422 KYIDETMPWALAKEEDKKERLGTVLYNLVESLRIVSVILSAFLPETSKKI 471


>gi|21282174|ref|NP_645262.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485354|ref|YP_042575.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207407|ref|ZP_06923846.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910366|ref|ZP_07127819.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|25009356|sp|Q8NY00|SYM_STAAW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|60390700|sp|Q6GBZ8|SYM_STAAS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21203610|dbj|BAB94310.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243797|emb|CAG42222.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296887970|gb|EFH26864.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888355|gb|EFK83542.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 657

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|157363213|ref|YP_001469980.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157313817|gb|ABV32916.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 624

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/495 (44%), Positives = 321/495 (64%), Gaps = 10/495 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N+ PH+G AY  IIAD++AR+ R+ G DV F TGTDEHGQKI +A+ + 
Sbjct: 2   KFYITTPIYYVNSDPHVGSAYTTIIADIIARYKRMMGYDVFFLTGTDEHGQKILQASSSL 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L+I+ D FIRTT+  H    +   KK+ +  DIYKG Y 
Sbjct: 62  GKDPQSFCDELADRFKQLWKKLNITNDGFIRTTDPNHMKVVQYFVKKMVENNDIYKGEYR 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y+N+DE+  G+D +   +    ++++ E+ YFFRLS YQDKLL YYE HPE
Sbjct: 122 GWYCVPCETYWNEDEI--GSD-KLCPSCGRELKYVSEQNYFFRLSRYQDKLLRYYEEHPE 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ +PDDP++++YVW+DAL NY++  GY 
Sbjct: 179 FVQPDFRRNEMMRILEGGLKDLSITRTTFKWGVPMPDDPEHVIYVWVDALINYISAIGY- 237

Query: 246 DNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             P+  K   K+WPADLH+IGK+I RFH+I WPA L+SA L LP+ VF+HG++   G+KI
Sbjct: 238 --PEDLKTFEKYWPADLHLIGKEINRFHSIIWPAMLMSAGLELPRTVFAHGWLTVDGQKI 295

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP   +EE G D LR++LVR+I  GKDG + +  L  R+N+DLAN  GNL+ 
Sbjct: 296 SKSLGNAIDPKYFVEEYGNDVLRFYLVRDINFGKDGDFSEKNLVNRLNSDLANDYGNLLH 355

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K Y   +P PGA  + DE       +  +E ++ M    + +A+ +V+  ++ 
Sbjct: 356 RTLAMIKKYYSSTMPRPGAHEQIDEKFKHDILQCCKEYQQFMDQYSLTQAVEKVMEALAI 415

Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVAD 481
            ++YFD +KPW L K+ + D+ STVL+   E + ++A +    +P  + ++F  L F   
Sbjct: 416 SNKYFDERKPWVLAKQKDFDKLSTVLFNVCESLLKVATMFSPIMPDSSEEVFSRLGFDQK 475

Query: 482 ENRCFQSLDQRLKPG 496
            ++        LKPG
Sbjct: 476 SSKYMLETWNILKPG 490


>gi|223044412|ref|ZP_03614445.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442201|gb|EEE48313.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 656

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/521 (42%), Positives = 332/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY+  +   G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGEIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   ENM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D  +PW L K    R     V+   VE IR  A+LLQ F+     +
Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDEDQRDMLGNVMAHLVENIRFAAVLLQPFLTHAPRE 481

Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +F  L + D      +SL+    L    ++ +   PIFPR 
Sbjct: 482 VFKQLNMNDPKLSQLESLESYGALTEPILVTEKPTPIFPRL 522


>gi|315660343|ref|ZP_07913196.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494632|gb|EFU82974.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 657

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/521 (42%), Positives = 334/521 (64%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D      + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D +Y+      G+  ++ H  V+ ++EE YFF +S Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHE-VELVKEESYFFNISKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E D+++ ++    +++  +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYTGPKHELDDAMEALALETVKDFNDNMESFQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  L+S  ++Y D   PW L K  +  D  + V+   +E IR   +LL+ F+     +
Sbjct: 422 ATVWKLISRTNKYIDETTPWVLAKDDSQKDMLANVMAHLIENIRFATVLLRPFLTHAPRE 481

Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +F  L + + E     SL++   LK   M+ +   PIFPR 
Sbjct: 482 VFKQLNINSPELFELASLERYGALKQAVMVTEKPSPIFPRL 522


>gi|15923480|ref|NP_371014.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926167|ref|NP_373700.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|156978818|ref|YP_001441077.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253316233|ref|ZP_04839446.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253735224|ref|ZP_04869389.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005283|ref|ZP_05143884.2| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|258429606|ref|ZP_05688280.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|269202110|ref|YP_003281379.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895097|ref|ZP_06303317.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|296276555|ref|ZP_06859062.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039687|sp|P67579|SYM_STAAN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54042047|sp|P67578|SYM_STAAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13700380|dbj|BAB41678.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246258|dbj|BAB56652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156720953|dbj|BAF77370.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253726784|gb|EES95513.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257849665|gb|EEV73632.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|262074400|gb|ACY10373.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282762515|gb|EFC02655.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 657

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|314937303|ref|ZP_07844645.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654599|gb|EFS18349.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 659

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/524 (42%), Positives = 334/524 (63%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI +
Sbjct: 1   MMAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY
Sbjct: 61  KAQKAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND----DEVY---KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            G Y GWYS+ DE YY +    D VY   K A G+  ++ H  V+ ++EE YFF ++ Y 
Sbjct: 121 LGEYEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHE-VELVKEESYFFNINKYT 179

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +Y+++P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWI
Sbjct: 180 DRLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWI 239

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+
Sbjct: 240 DALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N 
Sbjct: 300 HGWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNF 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++    
Sbjct: 360 DLANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFS 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ V  L+S  ++Y D   PW L K  +  D    V+   VE IR   +LL+ F+   
Sbjct: 420 VALSTVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHA 479

Query: 470 ANKIFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             +IF  L + + +     SL+    L+   M+ +   PIFPR 
Sbjct: 480 PKEIFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRL 523


>gi|57651372|ref|YP_185421.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|88194248|ref|YP_499040.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220665|ref|YP_001331487.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|221142318|ref|ZP_03566811.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258452829|ref|ZP_05700824.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049975|ref|ZP_06022834.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282925564|ref|ZP_06333217.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023499|ref|ZP_06377897.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|304380506|ref|ZP_07363183.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81695187|sp|Q5HII6|SYM_STAAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57285558|gb|AAW37652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87201806|gb|ABD29616.1| methionyl-tRNA synthetase, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150373465|dbj|BAF66725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257859515|gb|EEV82368.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259161910|gb|EEW46493.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940061|emb|CBI48437.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592468|gb|EFB97480.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|302750380|gb|ADL64557.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340951|gb|EFM06874.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320139424|gb|EFW31302.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|329313208|gb|AEB87621.1| Methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729770|gb|EGG66167.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 657

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLNESIMVTGQPKPIFPRL 522


>gi|257427267|ref|ZP_05603668.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275918|gb|EEV07386.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 657

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|239616428|ref|YP_002939750.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505259|gb|ACR78746.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 639

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/509 (40%), Positives = 332/509 (65%), Gaps = 7/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y++T I Y N++PHIG AY  I+AD++AR+ RL G DV F TGTDEHGQK+ +AA+
Sbjct: 2   KPKFYVTTPIYYINSEPHIGSAYTTIVADIVARYKRLSGYDVFFLTGTDEHGQKVLQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  + + DQ +  F+ +   L I+ D F+RTT++RH  T ++  KK+ + GD+YKG 
Sbjct: 62  EENLDPQTYSDQLAEKFKVLWKELQITNDYFVRTTDERHMKTVQLFVKKMLENGDVYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY +  E ++ ++++ K    +   +    V+W+ EE YFFRLS Y D LL +++ H
Sbjct: 122 YEGWYCVPCETFWTEEDIGKE---RVCPSCGREVKWVSEENYFFRLSKYNDALLKHFQEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RRNE++  +++GL+DLS++R +F WG+ +P+DP++++YVW+DAL NY++  G
Sbjct: 179 PEFVQPDFRRNEMLRILENGLRDLSITRTSFKWGVPMPNDPEHVIYVWVDALINYISAIG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y+D+P+ +  ++WPAD+H+IGK+I RFH++ WPA L+S  LPLPK++++HG++   G+KI
Sbjct: 239 YIDDPE-TFHRYWPADVHIIGKEINRFHSLIWPAMLMSVGLPLPKQIYAHGWLTVNGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP E ++  G DA+RY+L+R+I  G+DG + ++ L  R+NADLAN +GNL+ 
Sbjct: 298 SKSLGNAIDPREFVKAYGNDAVRYYLLRDIQFGRDGDFSEENLVHRINADLANDLGNLLH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K  +G++P  G   + D  +  +   V+ E  ++M N     +L  +      
Sbjct: 358 RTVAMIEKFNNGIVPKKGVVEDVDNQLYGLAEEVIAEYIDHMDNLRFTPSLDAIWRFARF 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D  +PW+L K     +R +TVLY  V+ +R ++++++  +P  A  I + +  A 
Sbjct: 418 GNKYIDLTEPWKLGKDPEKAERLNTVLYNLVDTLRIVSLMIEPVMPNTAKAIRERIGQAV 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E   F  L   L    +  K  +P+FPR 
Sbjct: 478 E-LDFTHLKLGLTKNGVGVKHGEPLFPRI 505


>gi|49482717|ref|YP_039941.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424601|ref|ZP_05601029.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257429904|ref|ZP_05606290.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432607|ref|ZP_05608969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435511|ref|ZP_05611561.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903075|ref|ZP_06310967.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904865|ref|ZP_06312725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907812|ref|ZP_06315650.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910128|ref|ZP_06317934.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913317|ref|ZP_06321108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918271|ref|ZP_06326011.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923022|ref|ZP_06330708.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957279|ref|ZP_06374737.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500366|ref|ZP_06666218.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509304|ref|ZP_06668020.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293515893|ref|ZP_06670583.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427024|ref|ZP_06819661.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591600|ref|ZP_06950237.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|60390704|sp|Q6GJI1|SYM_STAAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49240846|emb|CAG39513.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272628|gb|EEV04748.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257279420|gb|EEV10015.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282472|gb|EEV12605.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285148|gb|EEV15265.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314541|gb|EFB44928.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317837|gb|EFB48206.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322788|gb|EFB53108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325976|gb|EFB56282.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328288|gb|EFB58563.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331982|gb|EFB61491.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596501|gb|EFC01461.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283791203|gb|EFC30013.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921301|gb|EFD98359.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096326|gb|EFE26586.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467849|gb|EFF10359.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295129027|gb|EFG58656.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575469|gb|EFH94186.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312436421|gb|ADQ75492.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193851|gb|EFU24245.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 657

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|289551711|ref|YP_003472615.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181242|gb|ADC88487.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 657

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/521 (42%), Positives = 334/521 (64%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D      + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D +Y+      G+  ++ H  V+ ++EE YFF +S Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHE-VELVKEESYFFNISKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E D+++ ++    +++  +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYTGPKHELDDAMEALALETVKDFNDNMESFQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  L+S  ++Y D   PW L K  +  D  + V+   VE IR   +LL+ F+     +
Sbjct: 422 ATVWKLISRTNKYIDETTPWVLAKDDSQKDMLANVMAHLVENIRFATVLLRPFLTHAPRE 481

Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +F  L + + E     SL++   LK   M+ +   PIFPR 
Sbjct: 482 VFKQLNINSPELFELASLERYGALKQPVMVTEKPSPIFPRL 522


>gi|329731069|gb|EGG67441.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 657

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|312897476|ref|ZP_07756900.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310621537|gb|EFQ05073.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 648

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/479 (45%), Positives = 310/479 (64%), Gaps = 7/479 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++  YI+T I YP+A+ HIGH Y   IAD LARFHRL G D LF TG+DEHGQKI +A
Sbjct: 4   KEKKTYYITTPIYYPSAKLHIGHTYCTTIADSLARFHRLRGDDTLFITGSDEHGQKIQRA 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+    +VD     F+D+   L+IS D FIRTTE RH    + L ++  D GDIYK
Sbjct: 64  AEAQGMKPIEYVDGIVALFKDLWKRLNISNDVFIRTTEPRHERVVQDLMQRSFDNGDIYK 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y GWY   DE ++ ++++    DG++       P++ ++EE YF RL+ Y D+ L + 
Sbjct: 124 SEYEGWYCTPDETFWPENKL---PDGKHVCPDCGRPLELVKEESYFLRLNKYADRWLKFI 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNE+I+FVKSGL+DLS+SR +FDWGIK+P DP++++YVW DAL NYLT
Sbjct: 181 EENPDFIQPESRRNEMIAFVKSGLEDLSISRTSFDWGIKVPWDPKHVVYVWFDALANYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL++P+    KFWPA LH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G
Sbjct: 241 AAGYLEDPENFD-KFWPASLHLVGKEIVRFHTIIWPIMLMSCGLPLPKKVFGHGWLIVDG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP+ +IE  G DALRY+L++E+  G+DG +       R+NADLAN +GN
Sbjct: 300 TKMSKSLGNVVDPVPLIERYGADALRYYLLKEVRLGQDGNFSLPTFINRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R+++M+ K  DG++  P      D+ + ++    +++    M +  I  AL  +  L
Sbjct: 360 LLQRTLAMVEKYEDGVVAGPTDKEAVDDELAALAVETVRKFEAEMDDMKIDDALNDIWGL 419

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   ++Y D   PW L K      R  TVLY  +E +R +++L+   +P  A  ++  L
Sbjct: 420 IRRSNKYIDETVPWVLAKDADCVGRLRTVLYNLMESLRIISVLVSPVIPASAENMWTQL 478


>gi|188997460|ref|YP_001931711.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932527|gb|ACD67157.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 628

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/513 (43%), Positives = 322/513 (62%), Gaps = 21/513 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y++T I Y N  PH+GHAY  + ADVLAR++R  G+   F TGTDEHGQKI K A+
Sbjct: 2   QEKFYVTTPIYYVNDVPHLGHAYTTVAADVLARYYRQIGVKTFFLTGTDEHGQKIQKTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D+    F+++   L+ISYD FIRTT+  H    + +++K  + GDIY   
Sbjct: 62  EKGISPKELADKTHLAFKELWKKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y  +Y +  E +  + E+    D  Y    H  P + ++EE YFFRLS Y DKLL +YE 
Sbjct: 122 YESYYCVGCEEFKTETEI---KDYDYKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEK 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +PEFILP  R+NEV+SFVK GLKDLS+SRK     WGI +P DP + +YVW DALTNYLT
Sbjct: 179 NPEFILPDFRKNEVVSFVKQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +N +    +FWPAD+H++GKDILRFHA+YWPAFL+SA L + KKVF+HG+   +G
Sbjct: 239 AVGYPENLN----EFWPADVHIVGKDILRFHAVYWPAFLMSARLEISKKVFAHGWWTVEG 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP +  +E GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GN
Sbjct: 295 HKMSKSLGNVVDPFKAADEFGVDKLRYFLLREVPFGLDGDFSKSAVINRINSDLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SRS++MI K  +G I  P  F E +E   +V S+ L+  +  +Q     ++L +V   
Sbjct: 355 LISRSLTMIHKFQNGKIEKPSVFKEIEEEYKNVYSKTLENYKNFIQKLEFSKSLEEVWQF 414

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  +++Y    +PW+L K + +   T LY  V+ I  +  +L  F+P+   +   +L + 
Sbjct: 415 IDWLNKYIVKVEPWKLNKEDKEYLKTTLYTVVDGIYAVVWMLNPFMPQKMAEALSMLNIN 474

Query: 481 DENRCFQSLDQRLKP-GFMLHKTFD---PIFPR 509
           +       + + +KP  F +  T +   P+FPR
Sbjct: 475 E-------IKKDIKPYSFPVEITINQVVPLFPR 500


>gi|170755122|ref|YP_001779702.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120334|gb|ACA44170.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 645

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 311/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK  YSGW
Sbjct: 67  TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNT 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ ENM    I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMGKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +  +R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCILAFIPETSIKI 471


>gi|283469782|emb|CAQ48993.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 657

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHQVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|15896243|ref|NP_349592.1| methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|25009386|sp|Q97EW5|SYM_CLOAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15026047|gb|AAK80932.1|AE007796_2 Methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510398|gb|ADZ22034.1| methionyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 644

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/476 (44%), Positives = 309/476 (64%), Gaps = 7/476 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+T I YP+A+ HIG+ Y  + +D L RF RL G D    TGTDEHGQKI +
Sbjct: 1   MSEKKKFYITTPIYYPSAKLHIGNTYTTVASDALVRFKRLQGYDAFMLTGTDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+T K +VD+     +D+  +++ISYD FIRTT++ H    + + KK  D GDIY
Sbjct: 61  IAEDKGITPKAYVDEIVAGIKDLWKMMNISYDKFIRTTDEEHVKAVQKIVKKFYDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y GWY    E+++ + ++    DG+  +    PV+  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KSAYEGWYCTPCESFWTETQL---VDGKCPDCGR-PVEKTKEEAYFFKMSKYADRLIKYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HP+FI P  R+NE+++ F+K GL+DL +SR +FDWGI I  D ++++YVWIDAL+NY+
Sbjct: 177 EDHPDFIQPESRKNEMLNNFLKPGLQDLCISRSSFDWGIPITFDEKHVIYVWIDALSNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + D    KFWPADLH++GKDI+RFH IYWP  L++ +LPLPK+VF HG++L  
Sbjct: 237 TALGYGSDNDELYNKFWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKQVFGHGWLLVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP+ +I E G D +RY+L+ EI  G DG ++ +   K++N+DLAN +G
Sbjct: 297 GGKMSKSKGNVVDPVVLINEFGTDPVRYYLLHEIPFGSDGLFNNEIFIKKINSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ +MI K +DG I  P    E D  ++ +   + +++ E+++   I  AL  +  
Sbjct: 357 NLVSRTAAMIEKYFDGSIQPPVDKEEIDNELIDMAISLPEKLDEDIKKLKIPEALDHIWD 416

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L+   ++Y D   PW L K    +A   TVLY  VE +R +A  L  F+P+   KI
Sbjct: 417 LIKRANKYIDETTPWVLAKDENKKARLGTVLYNLVESLRFVATTLTPFLPETGEKI 472


>gi|242371680|ref|ZP_04817254.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350629|gb|EES42230.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 656

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/521 (42%), Positives = 331/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY+      G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL   +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSEDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   ENM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D  +PW L K  +  D    V+   VE IR  A+LLQ F+     +
Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDESQRDMLGNVMAHLVENIRFSAVLLQPFLTHAPRE 481

Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           +F  L + +      +SL+    L    M+ +   PIFPR 
Sbjct: 482 MFKQLNINNPKLTELESLESYGALTEPIMVTEKPSPIFPRL 522


>gi|70727520|ref|YP_254436.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|82582279|sp|Q4L3E7|SYM_STAHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68448246|dbj|BAE05830.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 659

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/522 (42%), Positives = 333/522 (63%), Gaps = 17/522 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV++R+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVISRYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKSLWSKLEISNDDFIRTTEDRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D +Y+      G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+++P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY++  GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISALGYLSDDDELFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   E+M++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYEGPKHELDEDMEALAHETVKHFNESMESFQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+     +
Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRFAAVLLRPFLTHAPKE 481

Query: 473 IFDILFVADENRCF--QSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + +E   F  +SL+Q   LK   M+ +   PIFPR 
Sbjct: 482 IFKQLNI-NEPELFELESLEQYGALKQPIMVTEKPTPIFPRL 522


>gi|282915808|ref|ZP_06323576.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283768925|ref|ZP_06341834.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282320299|gb|EFB50641.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283461106|gb|EFC08192.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 657

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTVPIMVTGQPKPIFPRL 522


>gi|148266948|ref|YP_001245891.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392994|ref|YP_001315669.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794269|ref|ZP_05643248.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407213|ref|ZP_05680358.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420820|ref|ZP_05683756.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258446123|ref|ZP_05694284.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258453822|ref|ZP_05701795.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|295407379|ref|ZP_06817176.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297246459|ref|ZP_06930299.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|147740017|gb|ABQ48315.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945446|gb|ABR51382.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788241|gb|EEV26581.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841171|gb|EEV65620.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843212|gb|EEV67625.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257855100|gb|EEV78042.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257863993|gb|EEV86748.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|285816189|gb|ADC36676.1| Methionyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967736|gb|EFG43768.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176646|gb|EFH35908.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315128616|gb|EFT84619.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329725056|gb|EGG61551.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 657

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|47092860|ref|ZP_00230643.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018764|gb|EAL09514.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 630

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/490 (44%), Positives = 324/490 (66%), Gaps = 13/490 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ RL G DV + TGTDEHGQKI   A+  G++ + +VD+ +  F+++   L+IS  D
Sbjct: 1   MARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND---DEVYKGADGQYY 150
           FIRTT+ RH  +   +++++ ++GDIY G Y GWYS+ DE Y+ +   +EVYK  +G+  
Sbjct: 61  FIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVI 120

Query: 151 NAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKD 206
             +    N V+ ++EE YFFR+S Y D+L+ YY SHPEFILP  R+NE+I+ F+K GL+D
Sbjct: 121 GGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR TFDWGIK+P +P++++YVWIDAL+NY+T  GY  + D    K+WPAD+ ++GK+
Sbjct: 181 LAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKE 240

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+RFH IYWP  L++ +LPLPK VF HG+IL K  K+SKS GNV+DP  +I+  G+DALR
Sbjct: 241 IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALR 300

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L+RE+  G DG +  +    RVN DLAN +GNL++R+V+MI K +DG IP   G  TE
Sbjct: 301 YYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTE 360

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA- 444
            D++++   + V++E   +M +     AL Q+ SL+S  ++Y D   PW L K    R  
Sbjct: 361 FDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLWSLISRTNKYIDETAPWTLAKDEDKRTE 420

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSL--DQRLKPGFMLH 500
            ++V+    E +R +A+LLQ F+ +   +IF  L + +EN + + S+     +  G  + 
Sbjct: 421 LASVMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEIPAGTTVV 480

Query: 501 KTFDPIFPRF 510
           K   PIFPR 
Sbjct: 481 KKGTPIFPRL 490


>gi|228476230|ref|ZP_04060933.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269715|gb|EEK11214.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 658

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/521 (42%), Positives = 333/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVY---KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY   K A G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+++P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V  L+S  ++Y D   PW L K  +  D    V+   VE IR   +LL+ F+     +
Sbjct: 422 STVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAPKE 481

Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + + +     SL+    L+   M+ +   PIFPR 
Sbjct: 482 IFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRL 522


>gi|258513470|ref|YP_003189692.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777175|gb|ACV61069.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 533

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/527 (41%), Positives = 327/527 (62%), Gaps = 24/527 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YIST I YP+ + HIGHAY  + AD  AR+ R+ G DV F TG+DEHGQKI + A+
Sbjct: 3   KPTFYISTPIYYPSDKLHIGHAYTTVAADSFARYKRMKGYDVWFLTGSDEHGQKIERTAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G +   +VDQ    F+ +   LD+SYDDFIRTT++RH    + +++K+ D+GDIYK  
Sbjct: 63  EKGQSPLEYVDQIVAGFKSLWKKLDVSYDDFIRTTQERHKKVVQDIFQKLYDQGDIYKAQ 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E ++ + ++   ADG   +    PV+ ++EE YFF++S Y D++L Y E +
Sbjct: 123 YEGHYCTPCETFWTEYQL--DADGNCPDCGR-PVEILQEESYFFKMSKYADEILKYIEDN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            EFI P  RRNE++SF+KSGL DL +SR TFDWGI++P DP++++YVW+DALTNY++  G
Sbjct: 180 AEFIQPNSRRNEMVSFIKSGLADLCVSRTTFDWGIQVPFDPKHVIYVWVDALTNYISALG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    K+WPAD+H++GKDI+RFH I WP  L++A + LPK+V  HG++L    K+
Sbjct: 240 YGTGDDSLFRKYWPADMHLVGKDIVRFHTIIWPIMLMAAGIELPKQVLGHGWLLLDSGKM 299

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+E+ ++ GVDA+RY+L+RE+  G DG+Y ++ L  R+N DLAN +GNL+S
Sbjct: 300 SKSKGNVVDPLELCDKYGVDAIRYYLLRELPLGSDGYYSEEALVNRINIDLANDLGNLIS 359

Query: 364 RSVSMILKDYDGMIPTPGAFTE---------------SDESILSVCSRVLQEIRENMQNQ 408
           RS SMI+K   G++  P    E                D  ++S+  +   E+ + M+ +
Sbjct: 360 RSTSMIVKFSKGVLEEPETPREPVLLEQYLGSEEAPAEDRDLISLALKTKYEVDDLMERR 419

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAF 465
            I  ALA V  LV   ++Y +   PW L K +P+   R +TVLY   E IR + +++  F
Sbjct: 420 DISGALAAVWRLVGRANKYVEETSPWSLAK-DPELRGRLATVLYNLAETIRFVTVMVTPF 478

Query: 466 VPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +P   + ++  L + +  E   +++L+    P        D IFPR 
Sbjct: 479 MPNFPSMVWQQLAIGNQPELHVWEALEWGNLPAGTRVVKGDAIFPRI 525


>gi|87162044|ref|YP_493176.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|161508736|ref|YP_001574395.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294850349|ref|ZP_06791082.1| metS [Staphylococcus aureus A9754]
 gi|87128018|gb|ABD22532.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|160367545|gb|ABX28516.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294822773|gb|EFG39209.1| metS [Staphylococcus aureus A9754]
 gi|315196171|gb|EFU26527.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320144201|gb|EFW35969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 657

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KSGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLNESIMVTGQPKPIFPRL 522


>gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
 gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
          Length = 650

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/513 (42%), Positives = 324/513 (63%), Gaps = 10/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+T I YP+ + HIGH+Y  +  D +AR+ R+ G DV+F TGTDEHGQKI   A
Sbjct: 2   DQKTFYITTPIYYPSGKAHIGHSYCTVATDAIARYKRMQGYDVMFLTGTDEHGQKIELNA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K +VD+    F+++  +L+IS D FIRTT+  H    + ++K++ D+G+IYKG
Sbjct: 62  AKAGVTPKEYVDEIVAGFQELWKLLNISNDRFIRTTDDYHVKAVQKIFKELYDRGEIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++    DG+  +     V+W EEE YFF+L  Y D+LL  YE 
Sbjct: 122 KYEGWYCTPCESFWTETQL---KDGKCPDCGRE-VKWAEEEAYFFKLGNYADRLLKLYED 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+FI P  R+NE+I F+K+GL DL +SR +F WGI +  DP++++YVW+DALTNY+T  
Sbjct: 178 QPDFIQPESRKNEMIQFIKNGLDDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITAM 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           GY    D    K+WPAD+H IGK+I+RFH I WPA L++ +LPLPK+V+ HG++L   G 
Sbjct: 238 GYGSGDDSDYRKYWPADVHFIGKEIVRFHTIIWPAILMALDLPLPKQVYGHGWLLFGDGS 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILCDRYGVDAIRYFLLREIPFGADGLFTNEALINRINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+ +M+ K + G IP      + D+ ++++ + +     E+M       ALA+V  L+
Sbjct: 358 LSRTTAMVQKYFGGSIPAQRQAEDLDQDLVAMATSLRGRYEESMDGFQFSNALAEVWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  ++Y D   PW L K  PD+A   + VLY   E +R ++IL+  F+P+ A KI   + 
Sbjct: 418 ARSNKYIDETMPWALGKA-PDKAPRLAAVLYNLCECLRIVSILITPFMPETAPKIQAQIG 476

Query: 479 VADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
              +   + S DQ  L P   +    + +FPR 
Sbjct: 477 AGADVCNWDSADQWGLLPADAVVSKGETLFPRI 509


>gi|323438722|gb|EGA96462.1| methionyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442066|gb|EGA99701.1| methionyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 657

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/523 (42%), Positives = 327/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L+  +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMVLDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|69248667|ref|ZP_00604797.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Enterococcus faecium DO]
 gi|227552442|ref|ZP_03982491.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257880089|ref|ZP_05659742.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257885518|ref|ZP_05665171.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257888319|ref|ZP_05667972.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257891180|ref|ZP_05670833.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893993|ref|ZP_05673646.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257896791|ref|ZP_05676444.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|260560302|ref|ZP_05832478.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293378577|ref|ZP_06624740.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293557282|ref|ZP_06675829.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293563094|ref|ZP_06677560.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293567520|ref|ZP_06678865.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294623374|ref|ZP_06702233.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940236|ref|ZP_07847409.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314941705|ref|ZP_07848584.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947651|ref|ZP_07851060.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314950637|ref|ZP_07853717.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992496|ref|ZP_07857917.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996350|ref|ZP_07861403.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194356|gb|EAN08866.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Enterococcus faecium DO]
 gi|227178417|gb|EEI59389.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257814317|gb|EEV43075.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257821374|gb|EEV48504.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257824373|gb|EEV51305.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257827540|gb|EEV54166.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830372|gb|EEV56979.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257833356|gb|EEV59777.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|260073647|gb|EEW61973.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291589763|gb|EFF21566.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291597221|gb|EFF28413.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291600569|gb|EFF30874.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605008|gb|EFF34476.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|292642906|gb|EFF61053.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|313589493|gb|EFR68338.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592956|gb|EFR71801.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313597184|gb|EFR76029.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599477|gb|EFR78320.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640556|gb|EFS05136.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645892|gb|EFS10472.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 669

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+ F+K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K    +A  ++V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|257882321|ref|ZP_05661974.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257817979|gb|EEV45307.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
          Length = 669

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+ F+K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKTEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K    +A  ++V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|88607461|ref|YP_505630.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598524|gb|ABD43994.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 513

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/508 (43%), Positives = 320/508 (62%), Gaps = 13/508 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I Y N  PHIGH Y  +I+DVLARF RLDG +V FTTGTDEHGQKI + A+  G  
Sbjct: 8   VTTPIYYVNDVPHIGHFYTTLISDVLARFKRLDGDNVKFTTGTDEHGQKIEETARKRGTP 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              FVD+ S +FR++        DDFIRTTE RH D    LW ++  +G IYKG Y+G+Y
Sbjct: 68  VLQFVDEVSESFRELVHKSGFCADDFIRTTESRHKDAVVALWDRLYSRGQIYKGSYAGFY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S+RDE +Y + ++    DG+        V W+EE GYFF+LS +Q+ LL  Y+ +P F++
Sbjct: 128 SVRDETFYQERDL---IDGKAPTGAE--VTWLEEPGYFFKLSEWQEALLQLYQDNPRFVV 182

Query: 189 PIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           P  + +EVISFVKSGL+DLS+SR      WGI +P DP++++YVW+DAL+NYL   G+ +
Sbjct: 183 PEGKLSEVISFVKSGLRDLSVSRSKAHLSWGIGVPGDPEHLIYVWVDALSNYLALVGFPN 242

Query: 247 NPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   FW  +    +HV+GKDIL+FHA+YWPA L++A LPLPK+V +HG+ L++G+K
Sbjct: 243 EDAEDYNNFWCGENSHVVHVVGKDILKFHAVYWPALLMAAGLPLPKQVVAHGWWLNEGQK 302

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGNVI P+ +I E G+D +RYFL+ E   G D  +    LK+RVN DLAN IGNLV
Sbjct: 303 ISKSLGNVICPLTIINEYGLDNVRYFLLSETPIGNDASFSAKRLKERVNCDLANNIGNLV 362

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+V+++ K  +G +P+        +  L     +L++ R  ++ +    AL  +I + S
Sbjct: 363 QRTVTLVHKWCEGKVPSVDMKLMCGDEALPDYQGILEQYRVYVEERRFFEALKFIIGVSS 422

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + Y   + PW+L K +   A  VL+  +E I+ + +LLQ F+P  + K+ + + V  E
Sbjct: 423 TANEYIAVKAPWKLFKEDTALAEAVLFKLLEYIKCIGLLLQPFLPVTSEKLLEQIAVPVE 482

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R F+ + + L  G +L K   PIF +F
Sbjct: 483 KRKFEHIAE-LCTGRVLPKAV-PIFSKF 508


>gi|258424475|ref|ZP_05687354.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845344|gb|EEV69379.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 657

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/523 (41%), Positives = 328/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTT++RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTKERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|88608152|ref|YP_506759.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600321|gb|ABD45789.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 503

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/507 (42%), Positives = 317/507 (62%), Gaps = 14/507 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T + Y N  PHIGHAY  +IADVL R  RL G +V FTTGTDEHGQK+   A+  
Sbjct: 2   RYYVTTPVYYVNDNPHIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTAKKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G     FV+  SR FRD+   +   + DFIRTTE RH +  + LW  +S    I  G YS
Sbjct: 62  GKCEIDFVNHVSRRFRDLCVAMHYDFSDFIRTTETRHKEAVQTLWSTLSKNNSISLGEYS 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS RDEA+Y + E+             +PV W +E  YFF+LS + + L   Y  +P 
Sbjct: 122 GWYSERDEAFYTEAELQNS-----LAPTGSPVSWTKEACYFFKLSQFSEPLKKLYAENPT 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R NE+++F+ +G+ DLS+SR    WGI +PD+P + +YVW+DALTNY+++ GY 
Sbjct: 177 FIQPKSRFNEMLAFLNTGMHDLSISRTRVQWGINVPDNPTHTVYVWLDALTNYISSVGYP 236

Query: 246 D-NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + + D   + FW     +H+IGKDILRFH+IYWPAFL +ANL  P  + +HG+ L+ GEK
Sbjct: 237 NTSADSLFSAFWDNARIIHIIGKDILRFHSIYWPAFLTAANLKTPDVILAHGWWLNDGEK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGN+IDP E+I E GVD +RYF +REI  GKDG + K  LK+R+N++LA+ IGNL+
Sbjct: 297 ISKSLGNIIDPFELISEFGVDPVRYFFIREITVGKDGNFSKVNLKERINSELADNIGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R++++  K    + P      ES+  +L     +  E + +++   ++ +L ++I L +
Sbjct: 357 HRTLTLTAK---LLGPKVSEIYESENELLEFAYSLATEYKNDIELLDLNSSLDRIIQLSN 413

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + Y   ++PW+LK+  P+ A  +L+  +E +R +AI LQ FVP+ A+ + D+L V  E
Sbjct: 414 KANEYISMEEPWKLKE-KPETAGRILHSVLEALRIIAIGLQPFVPQSASTMLDLLAVPPE 472

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIF 507
            R   ++++  R++PG  +     P+F
Sbjct: 473 ERKLANMNKESRIRPGTQIKLPASPLF 499


>gi|77919292|ref|YP_357107.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77545375|gb|ABA88937.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 511

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/512 (41%), Positives = 322/512 (62%), Gaps = 17/512 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  +  D+LAR+ R  G +V F TGTDEHGQK+ KAAQ  
Sbjct: 4   RFYVTTPIYYVNDVPHIGHAYTTVACDMLARYKRAQGQEVFFLTGTDEHGQKVEKAAQAK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T     D+  + ++ + + L+IS+ DFIRT+++RH      L++K+   GDIY G Y 
Sbjct: 64  GETPLELADRVVKRYQALWEKLNISHTDFIRTSQERHKKGVCDLFEKLHATGDIYLGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            WY    E ++ + ++  G           P   ++EE YFFR+S YQD+LL + E +P+
Sbjct: 124 DWYCTPCETFWTETQLMDGCCPDC----GRPTDKLKEESYFFRMSKYQDQLLKHIEENPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+++FV+ GL+DLS+SR +F WGI +P + ++++YVW DALTNY+T  GY 
Sbjct: 180 FIQPRSRRNEILNFVREGLRDLSISRTSFSWGIPVPGNERHVIYVWFDALTNYITALGYP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D+P+G    FWPA++H+IGKDILRFH +YWP FLL+A LPLP KVF+HG+   +G+K+SK
Sbjct: 240 DDPEGHYKNFWPANVHIIGKDILRFHTVYWPTFLLAAGLPLPAKVFAHGWWTVEGQKMSK 299

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNLVSRS
Sbjct: 300 SLQNVVEPNMLVDKYGVDAIRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLVSRS 359

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +M+ K + G++P P      DE  ++  +  ++++   M +   ++AL  +  L+   +
Sbjct: 360 TAMLNKYFGGILPEPKDRRPEDEPFIAAFADTVRKVDIFMDDLAFNKALQTIWELIGLGN 419

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------ 477
           +Y D   PW L K  +  DR  TVLY  ++ +R +A L+   +P  ++KI  +L      
Sbjct: 420 KYIDDTAPWALAKDPSQQDRLGTVLYNLLDSLRLVAQLIAPVMPDTSDKILALLNSKPDS 479

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             A  + C+  L+    PG  + K   P+FPR
Sbjct: 480 LTAMGDDCWGGLE----PGSEIAKA-KPLFPR 506


>gi|261208239|ref|ZP_05922912.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565960|ref|ZP_06446399.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293573149|ref|ZP_06684086.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
 gi|294615978|ref|ZP_06695805.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617639|ref|ZP_06697267.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260077496|gb|EEW65214.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162244|gb|EFD10105.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591164|gb|EFF22846.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596103|gb|EFF27368.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291606787|gb|EFF36172.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 669

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+ F+K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K    +A  ++V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDPETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|298693820|gb|ADI97042.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 657

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/523 (41%), Positives = 327/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTIWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLAQYGVLTEPIMVTGQPKPIFPRL 522


>gi|188584685|ref|YP_001916230.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349372|gb|ACB83642.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 655

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 328/521 (62%), Gaps = 19/521 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIGH+Y  + AD +AR+ +L G DV+F TGTDEHGQKI +
Sbjct: 1   MARDNTFYITTPIYYPSDKLHIGHSYTTVAADCMARYKKLTGYDVMFLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + FVD+   + +++  +LDI YDDFIRTTE+RH    + ++++  ++GDIY
Sbjct: 61  KAKENGKNPQQFVDEIVASIKELWTLLDIEYDDFIRTTEERHKSVVQKIFERFYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y GWY    E+++ +   DE     D          V+W++EE YFF++S Y D+LL
Sbjct: 121 KDQYEGWYCTPCESFWLERQLDEAKTCPDCA------REVEWVKEESYFFKMSKYADRLL 174

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            + E++PEFI P  R+NE+I+ F+  GL+DL +SR TF WGI++P D  +++YVW+DALT
Sbjct: 175 EHIENNPEFIQPESRKNEMINNFLNPGLEDLCVSRTTFKWGIEVPMDKDHVVYVWLDALT 234

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYL+  GYL   D    K+WP D+H++ K+I+RFH+IYWP FL++ +LPLPK+VF HG++
Sbjct: 235 NYLSALGYLSEDDTKFQKYWPCDVHLMAKEIVRFHSIYWPIFLMALDLPLPKQVFGHGWL 294

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L +  K+SKS GNV+DP  ++ + G DA+RY+L+REI+ G DG +  + L +R+N DLAN
Sbjct: 295 LLEEGKMSKSKGNVVDPEVLVNKYGSDAIRYYLLREISFGSDGVFTLEALIRRINYDLAN 354

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL++R+V+MI K +DG IP P    + D  +++     + E  ++M+      AL  
Sbjct: 355 DLGNLLNRTVAMIDKYFDGQIPEPVVSEQVDNDLINHAQETVTETEKHMEGMDFSEALKA 414

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  L+   ++Y D  +PW L K     DR +TVLY   E +R +++LL  F+P+   +I 
Sbjct: 415 LWELIGRTNKYIDETQPWILGKDPNKKDRLATVLYNLSESLRYISVLLSPFMPRTPKQIR 474

Query: 475 DILFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510
             L + D N+  Q+        ++  G  + K   P+FPR 
Sbjct: 475 SQLGI-DNNKEIQTYKSLYEWGQIPSGVRVSKD-KPLFPRL 513


>gi|229828787|ref|ZP_04454856.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM
           14600]
 gi|229793381|gb|EEP29495.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM
           14600]
          Length = 657

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/487 (44%), Positives = 317/487 (65%), Gaps = 13/487 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K YI+TAIAY + +PHIG+ YE+I+AD +ARF R +G DV F TG+DEHGQKI  
Sbjct: 1   MSNKGKYYITTAIAYTSGKPHIGNTYEIILADAIARFRRQEGYDVFFMTGSDEHGQKIQI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ K  VD+NS   R + D++D SYD F+RTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGISPKELVDRNSGEIRRIWDLMDTSYDKFMRTTDADHEAQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY   DEA++ D ++    DG+  +    PV    EE YFFR+S Y D+L+ + 
Sbjct: 121 KGTYEGWYCTSDEAFWTDSQL---VDGRCPDCGR-PVTRASEEAYFFRMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +SHPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 KSHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVTFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+ +    K+WPADLH+IGKDI+RFH IYWP FL++   PLPK+VF H +
Sbjct: 237 TGIGY--DCDGNHSDRYKKYWPADLHLIGKDIIRFHTIYWPIFLMALGQPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    + + +RVN+DLA
Sbjct: 295 LLQADGKMSKSRGNVIYADDLVDIFGVDAVRYFVLHEMPFENDGVISWELMAERVNSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R++SM  K + G++   G     D  + +  +  +Q + + M +  +  A+ 
Sbjct: 355 NTMGNLVNRTISMANKYFGGLVEDKGLEEPVDRELKAYAAGTVQRVTDKMADLHVADAIT 414

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V  L    ++Y D   PW L K     DR +TVLY  VE I   A LL++F+P  A++I
Sbjct: 415 EVFHLFRRSNKYIDETMPWALAKDADKQDRLATVLYNLVESIAIGASLLKSFMPSTADQI 474

Query: 474 FDILFVA 480
            D L + 
Sbjct: 475 LDQLNIG 481


>gi|83588921|ref|YP_428930.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83571835|gb|ABC18387.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 651

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/477 (44%), Positives = 307/477 (64%), Gaps = 6/477 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIGHA    +AD LAR+ RL G DV F TG+DEHGQKI + A+ A 
Sbjct: 6   FYVTTPIYYPSDKLHIGHALTTTMADTLARYKRLRGYDVYFLTGSDEHGQKIQRKAREAN 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +    +VD+    F+++   L+ISY+DFIRTTE RH    + L +KI D+GDIYK  Y G
Sbjct: 66  LEPIQYVDRIVATFQELWRRLNISYNDFIRTTEPRHARVVQALLQKIYDQGDIYKSTYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++    DG   +    PV+ ++EE YFFR+S Y D+LL Y + HP+F
Sbjct: 126 WYCTPCETFWTERQL---VDGNCPDCGR-PVELVKEESYFFRMSKYADRLLQYIKDHPDF 181

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P+ RRNE+ISF++ GL+DL +SR TFDWGI +P DP++++YVW DALTNY++  GY  
Sbjct: 182 IQPVTRRNEMISFIEGGLEDLCISRTTFDWGIPVPMDPKHVIYVWFDALTNYISALGYGT 241

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPA +H++GKDI+RFH I WP  L++A +  P++VF HG++L  G K+SKS
Sbjct: 242 ADDHLFRKYWPAAVHLVGKDIVRFHTIIWPIILMAAGIEPPRQVFGHGWLLVDGGKMSKS 301

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I+  G DA+RYFL+RE+  G DG+Y ++ L  R N DLAN  GNL+SR+ 
Sbjct: 302 RGNVVDPMILIDRYGSDAIRYFLLREMPYGADGYYSEEALINRYNTDLANDFGNLLSRTT 361

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K   G+I  P A    DE + ++ + +  E+   + +    RALA +  LV+  ++
Sbjct: 362 AMIEKFNGGVIDPPSAPEPLDEELKNLAAGIPDEVDNALNHYEFARALAAIWRLVNRANK 421

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           Y +   PW L +      R  TVLY   E +RQ  I++  F+P + ++++D L + D
Sbjct: 422 YIEETAPWALARDPGQKQRLQTVLYNLAEAVRQATIMVGPFMPGVPDRVWDQLGLKD 478


>gi|303241037|ref|ZP_07327547.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591462|gb|EFL61200.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 643

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/508 (41%), Positives = 327/508 (64%), Gaps = 9/508 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A+  GV
Sbjct: 7   YITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIQRKAEAKGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +D+  ++ I+ D FIRTT+K H +  + ++KK+ D+GDIYK  Y GW
Sbjct: 67  TPKQYVDEIVDGIKDLWKLMKITNDRFIRTTDKNHEEAVQKIFKKLYDQGDIYKSEYEGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++   ++    DG+  +     V+  +EE YFFRLS YQD+L+ + E +PEFI
Sbjct: 127 YCTPCESFWTKTQL---VDGKCPDCGRE-VELTKEESYFFRLSKYQDRLIKFIEENPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P+ R+NE+++ F++ GL+DL +SR TF+WG+ +  D ++++YVWIDAL+NY+T  G++ 
Sbjct: 183 QPVSRQNEMLNNFLRPGLEDLCVSRTTFNWGVPVTFDEKHVVYVWIDALSNYITALGFMS 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             + +  K+WPAD+H++GK+I+RFH I WPA L++   PLPK+++ HG++L +G K+SKS
Sbjct: 243 EDEQAYKKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQIYGHGWLLLEGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++E+ G+DA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNLVSR+V
Sbjct: 303 KGNVVDPVVLVEKYGLDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNLVSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG++P      + D+ +  V      ++ + +       AL ++  ++S  ++
Sbjct: 363 AMIDKYFDGVMPDERLEGDFDQDLKKVVMETPPKVEQLLDKLQFSSALTEIWKVISRTNK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K   N  R + V+Y   E +R ++ILLQ F+P+   KI++ L + D+  
Sbjct: 423 YIDETMPWALAKDEANKPRLAGVMYNLAESLRIVSILLQPFMPETPEKIWNQLGLTDKKT 482

Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRF 510
                 Q   + P        D IFPR 
Sbjct: 483 IDWDSTQNWGVYPAGTKVNKGDVIFPRI 510


>gi|328956554|ref|YP_004373940.1| methionine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672878|gb|AEB28924.1| methionine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 674

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/524 (41%), Positives = 323/524 (61%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG+AY  I  DV+AR+ R+   DV + TG+DEHGQKI  
Sbjct: 1   MTEKKTFYITTPIYYPSGKLHIGNAYSTIACDVMARYKRMQDFDVFYLTGSDEHGQKIEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ   +T + +VDQ +   + + ++L+IS D FIRTT+  H      ++++   +GDIY
Sbjct: 61  KAQELNITPQKYVDQMAEGMQKLWELLEISNDKFIRTTDPAHEKVVADIFERFLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
              Y GWYS+ DE +Y +        D+      G+  ++ H PV+ ++EE YFFR+S Y
Sbjct: 121 LDEYEGWYSVPDETFYTETQLVDIERDDQGNIVGGKSPDSGH-PVELIKEESYFFRMSKY 179

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            D+LL+YY  HP+FI P  R+NE+I+ F+K GL+DL++SR TF WG+K+P +P++++YVW
Sbjct: 180 SDRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKHVIYVW 239

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           IDAL NY+T  GY  +      KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F
Sbjct: 240 IDALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIF 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            HG++L K  K+SKS GNV+ P  ++E+ G+DALRY+L+RE+  G DG +  +    RVN
Sbjct: 300 GHGWLLMKDGKMSKSKGNVVYPEMLVEQYGLDALRYYLMREVTFGSDGVFTPEDFVSRVN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            DLAN +GNL++R+++MI K +DG +P   G  TE D  +     +V  + +  M+N   
Sbjct: 360 YDLANDLGNLLNRTIAMINKYFDGKVPEYSGNVTEFDTILKETAEKVCVDYQNEMENMQF 419

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468
             AL+ V  L+S  ++Y D   PW+L K     +  ++V+    E +R  AILLQ F+  
Sbjct: 420 SSALSHVWVLISRANKYIDETAPWKLAKEEEKTSELASVMVHLAETLRISAILLQPFLTH 479

Query: 469 LANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
              +IF  L V  E     S  Q         + K   PIFPR 
Sbjct: 480 APKEIFAQLGVEGEFAGNWSTVQFGSFPENTTVIKKGTPIFPRL 523


>gi|251809798|ref|ZP_04824271.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875420|ref|ZP_06284292.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251806666|gb|EES59323.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295777|gb|EFA88299.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329733027|gb|EGG69366.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 656

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/521 (42%), Positives = 329/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTEKRH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEKRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY+      G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +
Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481

Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 482 IFKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|257899755|ref|ZP_05679408.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837667|gb|EEV62741.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 669

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+ F+K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K     A  ++V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKNAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDPETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|258448031|ref|ZP_05696161.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257858721|gb|EEV81594.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
          Length = 657

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/521 (41%), Positives = 328/521 (62%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY + ++        K   G+  ++ H  V+ ++EE YFF +S Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVYPQYENGKIIGGKSPDSGHE-VELVKEESYFFNISKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWIDAL
Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY++  GYL + +    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL
Sbjct: 362 NDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+     +
Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKE 481

Query: 473 IFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 482 IFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|253730957|ref|ZP_04865122.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725307|gb|EES94036.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 657

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/523 (41%), Positives = 327/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K ++G +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFNGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLDNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLAQYGVLTESIMVTGQPKPIFPRL 522


>gi|163784145|ref|ZP_02179086.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880589|gb|EDP74152.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 633

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/508 (43%), Positives = 315/508 (62%), Gaps = 8/508 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  + ADVLAR++R  G+   F TGTDEHG KI K+A+ 
Sbjct: 3   DKFYITTPIYYVNDVPHIGHAYTTVAADVLARYNRQKGIKTFFLTGTDEHGLKIQKSAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   DQ  + F+++  VL+ISYD FIRTT++ H    + +++K  + GDIY G Y
Sbjct: 63  KGITPKELADQTHQKFKELWQVLNISYDRFIRTTDEDHIKAVQYIFQKCYENGDIYLGKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY +  E +  + E+    D  Y    H    + + EE YFFRLS Y DKLL  YE +
Sbjct: 123 EGWYCVGCEEFKTETEI---KDLDYKCPIHQKKCEKIVEESYFFRLSKYTDKLLKLYEKN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           PEFI P  RRNEV+SFVK GLKDLS+SRK     WGI +P D  + +YVW DALTNYLT 
Sbjct: 180 PEFIQPDYRRNEVVSFVKQGLKDLSVSRKRDRVKWGIPVPFDENHTIYVWFDALTNYLTA 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D        FWPAD+H++GKDILRFHA+YWPAFL+SA L +P+KVF+HG+   +G+
Sbjct: 240 VGYPDTESELFKTFWPADVHIVGKDILRFHAVYWPAFLMSAGLEIPEKVFAHGWWTVEGK 299

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP + ++  GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GNL
Sbjct: 300 KMSKSLGNVVDPFKAVKSYGVDELRYFLMREVPFGLDGDFSKSAVIGRINSDLANDLGNL 359

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SRS++MI K   G++     +T+ ++    +    ++ + ++++N   +++L  +   +
Sbjct: 360 ISRSLTMINKFKKGIVECGEKYTDLEKEYKEIYLYTVENVDKHLKNLEYNKSLELIWEFI 419

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +++Y    +PW LKK+      T LYV  + I  +  LL  F+P    +  ++L + +
Sbjct: 420 DFLNKYIVKTEPWALKKSQDPYLDTTLYVLADGIYAIIWLLSPFMPDKMKEALNMLGLEE 479

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                +  +     G  + K   P+FPR
Sbjct: 480 FTYIPEPFN--FPSGTKIAKKIKPLFPR 505


>gi|73663575|ref|YP_302356.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582280|sp|Q49UZ9|SYM_STAS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72496090|dbj|BAE19411.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 658

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/521 (42%), Positives = 329/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY     DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYTTTAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG +   ++D+     +D+   L+IS DDFIRTTE RH +  + +++++  +GDIY G 
Sbjct: 63  KAGKSEIEYLDEMIAGIKDLWGKLEISNDDFIRTTEIRHKEVVQQIFERLLAQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKG-------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY + ++            G+  ++ H  V+ ++EE YFF LS Y D+L
Sbjct: 123 YEGWYSVPDETYYTETQLVDPIMENGVIVGGKSPDSGHE-VELVKEESYFFNLSKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +PEFI P  R+NE+I+ F+K GL+DL++SR +FDWGI++  +P++++YVWIDAL
Sbjct: 182 LEFYDENPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGIRVQSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ ++PLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDDSLFKKYWPADIHIMAKEIVRFHSIIWPILLMALDIPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I   G+DA RY+L+RE+  G DG +  +G  +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLINRYGLDATRYYLMRELPFGSDGVFTPEGFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SM+ K +DG +P   G   E D+ +  +    ++   ENM +     AL
Sbjct: 362 NDLGNLVNRTISMVNKYFDGELPAYQGPKHELDKDMEQMALDTVKTFHENMDDLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           + +   +S  ++Y D   PW L K    +     V+   VE IR +A+LL+ F+     +
Sbjct: 422 STIWKFISRTNKYIDETSPWVLAKDEDQKEMLGNVMAHLVENIRIIAVLLRPFLTHAPKQ 481

Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + A E    +S++Q   L    M+    +PIFPR 
Sbjct: 482 IFSQLNINAPELFELESIEQYGALTEPIMVSGKPEPIFPRL 522


>gi|312828985|emb|CBX33827.1| methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 657

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/523 (41%), Positives = 327/523 (62%), Gaps = 19/523 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQD 174
           Y GWYS+ DE YY + ++    D QY N +          + V+ ++EE YFF +S Y D
Sbjct: 123 YEGWYSVPDETYYTESQL---VDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTD 179

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+ F+K GL DL++SR +F+WG+ +P +P++++YVWID
Sbjct: 180 RLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY++  GYL + +    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 240 ALVNYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS  NV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 300 GWILMKDGKMSKSKSNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     
Sbjct: 360 LANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSV 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D   PW L K  +  D    V+   VE IR  A+LL+ F+    
Sbjct: 420 ALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479

Query: 471 NKIFDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +IF+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 480 KEIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|47569887|ref|ZP_00240554.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553421|gb|EAL11805.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 626

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/491 (43%), Positives = 327/491 (66%), Gaps = 16/491 (3%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DISYDD
Sbjct: 1   MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG---AD 146
           FIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +    D + +G     
Sbjct: 61  FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 120

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLK 205
           G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+ F+K GL+
Sbjct: 121 GKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 179

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H++GK
Sbjct: 180 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 239

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+DAL
Sbjct: 240 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 299

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FT 384
           RY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP   A  T
Sbjct: 300 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVT 359

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE++++     L+++ E M+N     AL+ +  LVS  ++Y D  +PW L K   DR 
Sbjct: 360 EFDETLVAFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDENDRE 419

Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQ--RLKPGFML 499
             ++V+    EV+RQ  I+L  F+    +K+F  L + +E +  ++SL     +  G  +
Sbjct: 420 KLASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTEEAHTSWESLSTIGCIPAGTKV 479

Query: 500 HKTFDPIFPRF 510
            K  +PIFPR 
Sbjct: 480 EKG-NPIFPRL 489


>gi|114565624|ref|YP_752778.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336559|gb|ABI67407.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 645

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/519 (41%), Positives = 329/519 (63%), Gaps = 18/519 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ ++  YI+T I YP+   HIGHAY  + AD +ARF R+ G DV + TGTDEHGQKI K
Sbjct: 1   MQRKKSYYITTPIYYPSDNLHIGHAYTTVAADCMARFKRMQGYDVFYLTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+    +VD    + R + + + I++ DFIRTTE RH    + ++ K+ ++GDI+
Sbjct: 61  AAREKGMEPIKYVDGIVESIRQLWETMLITHTDFIRTTEARHEQLVQKIFNKVYEQGDIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWY    E ++ + ++   A+G   +     V+ ++EE YFF +S Y D+LL + 
Sbjct: 121 ISQYEGWYCTPCETFFTERQL---AEGNCPDCGRE-VELLKEESYFFNMSKYADRLLEHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+HP+FI P  RRNEV++F+K GL+DL +SR TF WG+ +P + ++++YVW DAL NYLT
Sbjct: 177 ETHPDFIQPESRRNEVVNFIKMGLEDLCVSRTTFQWGVPVPFNQKHVVYVWFDALINYLT 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+D+ +  K ++WPAD+H++ KDI+RFHAI WP  L++ +LPLPKKV +HG+I+ +G
Sbjct: 237 AIGYMDDEEKFK-QYWPADVHLMAKDIIRFHAIIWPIMLMALDLPLPKKVCAHGWIMLEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ ++++ GVDA+RY+LVRE++ G+DG+Y ++ L  R+N+DLAN +GN
Sbjct: 296 GKMSKSKGNVVDPVVLVKKYGVDAVRYYLVRELSFGQDGYYSEEMLVNRINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+++MI + +DG+IP  G     DE +++      +E  E +        +     L
Sbjct: 356 LISRTIAMIERYFDGVIPVSGIAEALDEDLINTAREAYREATEKLDKLDFASYIMATRKL 415

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VS  ++Y D   PW L K     +R ++V+Y   E IR   I+L   +P L ++    + 
Sbjct: 416 VSRANKYIDETAPWLLAKEVAKKERLASVMYNLAESIRIALIMLAPCMPTLLSRANRQIE 475

Query: 479 VADENRCFQSLD-------QRLKPGFMLHKTFDPIFPRF 510
           + D N   Q+LD        R K G  + +  +P+FPR 
Sbjct: 476 IFDLN---QNLDWDEAAEWGRCKAGSKVRRG-EPLFPRI 510


>gi|222475434|ref|YP_002563851.1| methionyl-tRNA synthetase (metS) [Anaplasma marginale str. Florida]
 gi|222419572|gb|ACM49595.1| methionyl-tRNA synthetase (metS) [Anaplasma marginale str. Florida]
          Length = 524

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/516 (41%), Positives = 326/516 (63%), Gaps = 14/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ E  Y++T I Y N  PHIGH Y  +I+DV ARF  L G  V FTTGTDEHGQK+  
Sbjct: 10  VRQGECFYVTTPIYYVNDTPHIGHFYTTLISDVAARFRSLSGKQVKFTTGTDEHGQKVEN 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + FVD+ S +FR++  V   S +DFIRTTE+RH      LW+++     IY
Sbjct: 70  MARARGVPVRQFVDEISGSFRNLVGVSGFSCNDFIRTTEERHKRAVLALWERLRGNNQIY 129

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+RDE +Y + ++    DG+        V+W+EE GYFF+LS +Q+ LL +Y
Sbjct: 130 LGHYAGFYSVRDETFYQERDL---VDGKAPTGAE--VEWLEEPGYFFKLSEWQESLLKFY 184

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+F++P  + NEVISFV+SGL+DLS+SR  K+  WGI++P D  +I+Y+W+DAL  Y
Sbjct: 185 ADNPKFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCY 244

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L   G+ +  +G   ++W +D     HV+GKDILRFHA+YWPA L++A+LPLPK++ +HG
Sbjct: 245 LALLGFPET-EGEYKRYWGSDGAVSTHVVGKDILRFHAVYWPALLMAADLPLPKQIVAHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + L++G+KISKS+GNVIDP  +IE+ G+D  RYFL+ E   G D  +    L +R+N DL
Sbjct: 304 WWLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN  GNLV R+++++ ++  G IP      + +E+ ++  + ++Q + E M       AL
Sbjct: 364 ANNFGNLVQRTITLVHRECGGKIPEVEGMMQGEEAPINYKAVLVQYV-EYMAEYRFFEAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V++L S  + Y   + PW+L K +   A  V++  +E IR + I+LQ FVP  A+KI 
Sbjct: 423 KFVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKIL 482

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D + +  + R F+   +  + G  L  T  P+F + 
Sbjct: 483 DQISLPADRRSFEHFSEFCRGGVSL-GTPTPVFGKL 517


>gi|313902248|ref|ZP_07835654.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467478|gb|EFR62986.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 689

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/516 (43%), Positives = 309/516 (59%), Gaps = 14/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R + YI+T I YPN + HIGH Y  + AD LAR+HRL G +    TGTDEHGQKI +A
Sbjct: 21  RGRGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDETWLLTGTDEHGQKIERA 80

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG     ++D      R +   L ISYDDFIRTTE RH    + +++++ DKGDIYK
Sbjct: 81  ARQAGKEPLEYIDPIVEATRQLWQRLHISYDDFIRTTEPRHKARVQQIFQRLYDKGDIYK 140

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G Y    EAYY + E+    DG        PV+ ++EE YFFRLS Y + LL + E
Sbjct: 141 GVYEGLYCTACEAYYTEAELL---DGGRCPVHETPVERLQEESYFFRLSRYAEPLLEHIE 197

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP FI P  RRNEVI+F++ GL+DLS+SR +F WGI +P DP +++YVWIDAL NY+T 
Sbjct: 198 RHPGFIQPPSRRNEVIAFIRQGLQDLSVSRTSFRWGIPVPFDPDHVIYVWIDALANYITA 257

Query: 242 TGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PDG    +FWPAD+H+IGKDILRFHAI WPA L++   PLP+ V+ HG++L  G
Sbjct: 258 LGW---PDGELYRRFWPADVHLIGKDILRFHAIIWPALLMALGEPLPRCVYGHGWLLIDG 314

Query: 301 EKISKSL--GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            KI KS   G VIDP+++IE+ GVD +RYFL+RE+  G DG Y ++ L +R+N DLAN +
Sbjct: 315 GKIGKSRAGGQVIDPVQLIEKYGVDPVRYFLLREVPFGDDGSYSEEALVRRLNTDLANDL 374

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL  R+  MI +  DG IP P A   SD  + +        + + +    +  AL  + 
Sbjct: 375 GNLAWRTTGMIQRFLDGRIPRPPAGA-SDGVLAAAARETAARVEQALDRFDLPAALQAIW 433

Query: 419 SLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L+   ++Y D Q PW L++    DR   VLY   E  R + +LL  F+ +   +++  L
Sbjct: 434 DLIGRANKYIDEQAPWALRREGRQDRLEAVLYDVAETARVVGVLLSPFLVETPARLWTQL 493

Query: 478 FVADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510
            +  + R     Q L+    P         P+FPR 
Sbjct: 494 GLGPDYRPAGWQQGLEWGQLPAGARVVRDQPLFPRI 529


>gi|269958523|ref|YP_003328310.1| methionyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848352|gb|ACZ48996.1| methionyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 515

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/516 (42%), Positives = 324/516 (62%), Gaps = 14/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+  E  Y++T I Y N  PHIGH Y  +I+DV ARF  L G  V FTTGTDEHGQK+  
Sbjct: 1   MRRGECFYVTTPIYYVNDTPHIGHFYTTLISDVAARFRSLSGKQVKFTTGTDEHGQKVEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + FVD+ S +FR++  V   S +DFIRTTE+RH      LW+++     IY
Sbjct: 61  MARARGVPVRQFVDKISGSFRNLVGVSGFSCNDFIRTTEERHKRAVLALWERLRGNNQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+RDE +Y + ++    DG+        V+W+EE GYFF+LS +Q+ LL +Y
Sbjct: 121 LGHYAGFYSVRDETFYQERDL---VDGKAPTGAE--VEWLEEPGYFFKLSEWQESLLKFY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+F++P  + NEVISFV+SGL+DLS+SR  K+  WGI++P D  +I+Y+W+DAL  Y
Sbjct: 176 ADNPKFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCY 235

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L   G+ +  +G   ++W +D     HV+GKDILRFHA+YWPA L++A LPLPK++ +HG
Sbjct: 236 LALLGFPET-EGEYKRYWGSDDAVSTHVVGKDILRFHAVYWPALLMAAGLPLPKQIVAHG 294

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + L++G+KISKS+GNVIDP  +IE+ G+D  RYFL+ E   G D  +    L +R+N DL
Sbjct: 295 WWLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDL 354

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN  GNLV R+++++ ++  G IP      + +E+ ++  + ++Q + E M       AL
Sbjct: 355 ANNFGNLVQRTITLVHRECGGKIPGVEGMMKGEEAPINYEAVLVQYV-EYMAEYRFFEAL 413

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V++L S  + Y   + PW+L K +   A  V++  +E IR + I+LQ FVP  A+KI 
Sbjct: 414 KFVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKIL 473

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D + +  + R F+   +  + G  L  T  P+F + 
Sbjct: 474 DQISLPADRRTFEHFSEFCRGGVSL-GTPTPVFGKL 508


>gi|289523381|ref|ZP_06440235.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503073|gb|EFD24237.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 646

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/480 (43%), Positives = 310/480 (64%), Gaps = 7/480 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I Y N  PHIGHAY  + ADV+AR+ R+ G+D LF TGTDEHGQK+ +
Sbjct: 1   MNRESSFYITTPIYYVNDVPHIGHAYTTVAADVMARYKRMCGIDTLFATGTDEHGQKVQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +   D+   NF+ + + L+IS DDF+RTTE+RH +  + ++KK+ D+GDIY
Sbjct: 61  VAQREGITPQELADRTVLNFKKLWEALNISCDDFVRTTEQRHIEVVQYIFKKLMDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY +  E Y  + ++    +G+       P++ M EE YFFR+S Y   LL YY
Sbjct: 121 KGTYEGWYCVPCETYVPESQM---GEGKTCPDCRRPLERMTEESYFFRMSKYAQPLLEYY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P  ++P  R NE++SF+K GLKD S+SR T  WGI +P D  +++YVW DAL NYLT
Sbjct: 178 EKNPTAVMPESRYNEIVSFIKMGLKDQSVSRTTLKWGIPVPGDDAHVIYVWFDALINYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + +  K K+WP   H++GKDILRFH+I WP+ LL+  +  PK+VF+HG+   +G
Sbjct: 238 VCGYPQDEERWK-KYWPVVRHLVGKDILRFHSIVWPSMLLALGVNPPKQVFAHGWWTVEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DP EV++  G D  RYF++RE+  G DG + +  L +R+N+DLAN +GN
Sbjct: 297 EKMSKSRGNVVDPFEVVDLYGADPFRYFMLREVPFGLDGDFSEKALVQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVI 418
           L+SR++ M++K +DG++P P    T+ D+ I   V   +LQ +  +M       AL ++ 
Sbjct: 357 LLSRTLQMVVKYFDGIVPEPLSKSTKEDQEIGGDVVEALLQRVDRSMSRFAYDDALKEIW 416

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V   ++Y D   PW+L ++ + +R S+VLY   E ++ +A+ L+ F+P  A +I++ L
Sbjct: 417 GYVGLANKYIDLTMPWKLGEEGDRERLSSVLYNLCESLKCIALFLRPFMPAKALEIWEQL 476


>gi|254520460|ref|ZP_05132516.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914209|gb|EEH99410.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 647

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/490 (42%), Positives = 318/490 (64%), Gaps = 9/490 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LAR+ RL G DV+F TGTDEHGQKI + A+
Sbjct: 3   KKTYYITTPIYYPSTKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQRIAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ DKGDIYK  
Sbjct: 63  EKGITPKEHVDEIVSGIKDLWKMMNISYDKFIRTTDDYHIKAVQDIFKKLYDKGDIYKSS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y DKL+ Y E+H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKSKEEAYFFKMSNYADKLMEYIETH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F+K GL+DL +SR +F+WG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMVNNFLKPGLQDLCVSRTSFNWGVPVTFDENHVVYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      K+WPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 239 GYGSDNKDLYDKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++E  GVDA+RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 299 MSKSKGNVVDPVTLVENFGVDAVRYYLLREIPFGSDGLFNNEIFIKKINSDLCNDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+MI K +DG+IP        D+ ++S+     +++ + + +  I  AL  +  L+ 
Sbjct: 359 SRTVAMIEKYFDGVIPNNNIKEAIDDELISLALETPKKVNKAIDDLRIPEALENIFELIG 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R  ++LL AF+P  + KI + +  +
Sbjct: 419 RANKYIDETTPWILAKDEDKKERLGTVLYNLIESLRFSSVLLSAFLPDTSKKINEQINAS 478

Query: 481 DENRCFQSLD 490
             N  F+SL+
Sbjct: 479 --NITFESLN 486


>gi|319399647|gb|EFV87901.1| methionyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 656

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY+      G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIIGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +
Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481

Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 482 IFKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|27469211|ref|NP_765848.1| methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866027|ref|YP_187724.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366132|ref|ZP_06612819.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258352|sp|Q8CQU3|SYM_STAES RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81675420|sp|Q5HRR5|SYM_STAEQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|27316760|gb|AAO05935.1|AE016751_230 methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636685|gb|AAW53473.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319726|gb|EFE60085.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723953|gb|EGG60478.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329737889|gb|EGG74117.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 656

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY+      G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +
Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481

Query: 473 IFDILFVADEN-RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 482 IFKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|154249481|ref|YP_001410306.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153417|gb|ABS60649.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 650

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/480 (44%), Positives = 315/480 (65%), Gaps = 3/480 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y NA+PHIG +Y  II D+LAR+ RL G +V + TGTDEHGQKIA+AA+ 
Sbjct: 2   KKFYITTPIYYVNAEPHIGSSYTTIIGDILARYKRLMGYEVFYLTGTDEHGQKIAQAARE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K   D  +  F+++   L I+ D FIRTT++ H  T +    K+ + GDIYKG Y
Sbjct: 62  KGLEPKELCDTLAEKFKELWKDLGITNDYFIRTTDENHEKTVQYFVSKMMENGDIYKGIY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY +  E Y+N++E+     G     +    V  + EE YFFRLS Y D LL +++ +
Sbjct: 122 EGWYCVPCETYWNEEELEHDEHGHNICPSCKREVNLIREENYFFRLSKYNDALLKHFQEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ P  RRNE++  ++SGLKDLS++R T  WGI +P+DP++++YVW+DAL NY++  G
Sbjct: 182 PDFVEPDFRRNEMLKILESGLKDLSITRTTLKWGIPMPNDPEHVIYVWVDALINYVSAIG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y ++ D    K+WPAD+H+IGK+I RFH++ WPA L+S  LPLPKKVF+HG++   G+KI
Sbjct: 242 YPNDMDKFN-KWWPADVHLIGKEINRFHSLIWPAMLMSVGLPLPKKVFAHGWLTVNGQKI 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP E + + G D +RY+LVR+I  GKDG + ++ L KR+N+DLAN  GNL+ 
Sbjct: 301 SKSLGNAIDPREYVRKYGNDVVRYYLVRDIVFGKDGDFSEENLIKRLNSDLANDYGNLLH 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K +D +IP  G   E D+ ++     V  +  E M +  I  AL  +   +S+
Sbjct: 361 RTLAMIQKHFDSVIPGVGNLEEIDKKLIEDYDLVKNKFIELMDSYKITDALEVLWQFISQ 420

Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +++YFD  KPW L K+ N +R  TVL +  E I ++A L+   +P  + +++  L V ++
Sbjct: 421 LNKYFDETKPWVLAKEGNKERLGTVLSLVTESIFKVATLVSPVMPDSSLEVYKRLSVNEK 480


>gi|222100458|ref|YP_002535026.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572848|gb|ACM23660.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 643

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/470 (43%), Positives = 307/470 (65%), Gaps = 2/470 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 16  KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 76  GKDPQKFCDELAEKFKQLWKELKITNDHFIRTTDETHMKTVQEFVAKMKENGDVYKGVYK 135

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  D +       PV+W+EEE YFFRLS Y+D LL +YE HP+
Sbjct: 136 GWYCVPCETFWNEDEVVKEGDERLCPECRRPVKWVEEENYFFRLSKYRDALLKHYEEHPD 195

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R +F WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 196 FVEPDFRRNEMLKILEGGLKDLSITRTSFKWGVPMKDDPEHVIYVWVDALINYVSAIGYG 255

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +    ++WPADLH+IGK+I RFH+I WPA L+S  LPLP+KVF+HG++   G+KISK
Sbjct: 256 WNEEMFN-RWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPEKVFAHGWLTVNGQKISK 314

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 315 SLGNAIDPRFFVKRYGNDVVRYYLIRDIVFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 374

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P      D  +            + M +  +  AL ++   +++ +
Sbjct: 375 TAMINKYFNGKLPSPANEEGPDGWLKERFFETKNAYYDLMDSYRLTEALDRIWEFIADAN 434

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +YF+  KPW L K+   +R  TVLY ++E + ++A++    +P  + ++F
Sbjct: 435 KYFNDTKPWVLAKEGKSERLGTVLYNSLEAVFKVALMTLPVMPDTSQEVF 484


>gi|29375514|ref|NP_814668.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971380|ref|ZP_05421966.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255973998|ref|ZP_05424584.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617799|ref|ZP_05474645.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761684|ref|ZP_05502264.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854227|ref|ZP_05559591.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256957214|ref|ZP_05561385.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960056|ref|ZP_05564227.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964250|ref|ZP_05568421.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257077814|ref|ZP_05572175.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257083841|ref|ZP_05578202.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257089340|ref|ZP_05583701.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418524|ref|ZP_05595518.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257421174|ref|ZP_05598164.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294780517|ref|ZP_06745880.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300859824|ref|ZP_07105912.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|38258306|sp|Q837B3|SYM_ENTFA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29342974|gb|AAO80738.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962398|gb|EET94874.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255966870|gb|EET97492.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597326|gb|EEU16502.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682935|gb|EEU22630.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256709787|gb|EEU24831.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256947710|gb|EEU64342.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256950552|gb|EEU67184.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954746|gb|EEU71378.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256985844|gb|EEU73146.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256991871|gb|EEU79173.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256998152|gb|EEU84672.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160352|gb|EEU90312.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162998|gb|EEU92958.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294452344|gb|EFG20783.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300850642|gb|EFK78391.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|323480110|gb|ADX79549.1| methionyl-tRNA synthetase/Methionine--tRNA ligase, MetRS
           [Enterococcus faecalis 62]
          Length = 669

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|257415492|ref|ZP_05592486.1| methionyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157320|gb|EEU87280.1| methionyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 669

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQRIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|225874399|ref|YP_002755858.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793634|gb|ACO33724.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 770

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/539 (42%), Positives = 323/539 (59%), Gaps = 41/539 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +K Y++T I Y NA+PHIG +Y  ++AD +AR  R  G++  F TGTDEHGQKI +
Sbjct: 1   MPESKKFYLTTPIYYVNARPHIGTSYTTLVADTIARRKRALGIETWFLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AG + + F D+ S  FR + D + + YDD+IRTTE RH    + L+  + ++G IY
Sbjct: 61  SAEKAGCSPQEFTDEVSAQFRGLWDRMGLEYDDYIRTTEPRHKRGVQKLFALLKERGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y+G Y + DEAY +      G  G          + + EE YFF+LSA++  LL YY
Sbjct: 121 KGTYTGQYCVSDEAYVD------GPPGIACPDCGRITETVSEENYFFKLSAFERTLLEYY 174

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+HPEFI P  RRNEV+SFV+SGLKDLS+SR +F+WGI +P D ++++YVW+DAL NY+T
Sbjct: 175 EAHPEFIQPETRRNEVLSFVRSGLKDLSISRTSFNWGIPVPGDEKHVIYVWMDALANYIT 234

Query: 241 TTGYLDN---PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           + G+           AKFWPADLH+IGK+I RFH +YWPAFL++A LPLPK + +HG++L
Sbjct: 235 SLGWESEDAAARARFAKFWPADLHIIGKEISRFHCVYWPAFLMAAGLPLPKSIVAHGWLL 294

Query: 298 HKGEKISKSLGNVIDPIEVI---------------EEVGVDALRYFLVREIACGKDGFYD 342
            +  K+SKS GN++    ++               +  G D LRYFL+RE+  G+DG + 
Sbjct: 295 FEQNKMSKSRGNIVRAETILDVFGAMKPDLPKAGQDRFGADVLRYFLLREVVFGQDGSFS 354

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEI 401
            D L +R NADLANG GNLVSR++SMI K +DG++P   GA  E  E+     +R L   
Sbjct: 355 FDALVQRYNADLANGYGNLVSRTLSMIQKYFDGVVPANDGASAEIGEA----AARTLTAF 410

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-----LYVTVEVIR 456
            E+M      RAL  V +LV  VD Y  AQ PW+ K+   D A        LY   E IR
Sbjct: 411 DEHMAGLDFSRALETVWTLVGAVDGYLTAQAPWKQKEGVTDDAQAALRARSLYTAAEAIR 470

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR------LKPGFMLHKTFDPIFPR 509
            +  L+   +P  A +++  L + D     +  + +      L+PG  L     P+FPR
Sbjct: 471 VITTLVYPVMPWAAAQVWAQLGLGDIEAAAKRGELKNLAWGGLQPGTKLG-VLGPVFPR 528


>gi|153938113|ref|YP_001389440.1| methionyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934009|gb|ABS39507.1| methionine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317546|gb|ADF97923.1| methionine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 645

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 310/469 (66%), Gaps = 7/469 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+   V
Sbjct: 7   YVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+     +++  +++I YD FIRTT++ H +  + ++K + + GDIYK  YSGW
Sbjct: 67  TPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYENGDIYKSEYSGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+  +EE YFF++S Y  KL+ Y ESHPEFI
Sbjct: 127 YCTPCESFWTETQL---EDGKCPDCGR-PVEKAKEEAYFFKMSKYAPKLIEYIESHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDDKHVIYVWIDALANYITALGYST 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G K+SKS
Sbjct: 243 EKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+V
Sbjct: 303 KGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG IP      + DE ++ +     +++ E+M+   I  AL ++ + +   ++
Sbjct: 363 AMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEESMEKLRIPEALEEIWTFIGRANK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D   PW L K  +   R  TVLY   E +R +++ + AF+P+ + KI
Sbjct: 423 YIDETTPWILAKDESKKGRLGTVLYNLAESLRIISVCISAFIPETSIKI 471


>gi|257081173|ref|ZP_05575534.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257086267|ref|ZP_05580628.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256989203|gb|EEU76505.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256994297|gb|EEU81599.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 669

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|315032441|gb|EFT44373.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 677

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|295113880|emb|CBL32517.1| methionyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 669

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|315148087|gb|EFT92103.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 677

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 EKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|227517850|ref|ZP_03947899.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555041|ref|ZP_03985088.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229546775|ref|ZP_04435500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548866|ref|ZP_04437591.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|293383808|ref|ZP_06629715.1| methionine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388716|ref|ZP_06633209.1| methionine--tRNA ligase [Enterococcus faecalis S613]
 gi|307268005|ref|ZP_07549393.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307271930|ref|ZP_07553198.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307275347|ref|ZP_07556490.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307278375|ref|ZP_07559450.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307290946|ref|ZP_07570836.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901528|ref|ZP_07760801.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312904490|ref|ZP_07763649.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312906976|ref|ZP_07765972.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312952803|ref|ZP_07771665.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312978767|ref|ZP_07790494.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|227074693|gb|EEI12656.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227175828|gb|EEI56800.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229305887|gb|EEN71883.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229308124|gb|EEN74111.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|291078884|gb|EFE16248.1| methionine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081873|gb|EFE18836.1| methionine--tRNA ligase [Enterococcus faecalis S613]
 gi|306498016|gb|EFM67543.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306504881|gb|EFM74076.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507981|gb|EFM77108.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306511436|gb|EFM80438.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515646|gb|EFM84173.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310626961|gb|EFQ10244.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629319|gb|EFQ12602.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310632188|gb|EFQ15471.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311288474|gb|EFQ67030.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291323|gb|EFQ69879.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315029800|gb|EFT41732.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315034325|gb|EFT46257.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315145783|gb|EFT89799.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315149690|gb|EFT93706.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153002|gb|EFT97018.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155233|gb|EFT99249.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315157560|gb|EFU01577.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315163011|gb|EFU07028.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315167934|gb|EFU11951.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315172032|gb|EFU16049.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173438|gb|EFU17455.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574157|gb|EFU86348.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315577288|gb|EFU89479.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315581700|gb|EFU93891.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327534510|gb|AEA93344.1| methionine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329574121|gb|EGG55698.1| methionine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 677

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|315027115|gb|EFT39047.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 677

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|242241575|ref|ZP_04796020.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234956|gb|EES37267.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 656

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 15/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +    D VY+      G+  ++ H  V+ ++EE YFF ++ Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHE-VELVKEESYFFNINKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVWIDAL
Sbjct: 182 LEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +
Sbjct: 422 STVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPRE 481

Query: 473 IFDILFVADENRC-FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 482 IFKQLNINNPDLYQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|300853381|ref|YP_003778365.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433496|gb|ADK13263.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 644

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/477 (42%), Positives = 314/477 (65%), Gaps = 7/477 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIG+ Y  + AD LARF RL G DV+  TGTDEHGQKI + A+
Sbjct: 3   KKTYYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGYDVMLLTGTDEHGQKIQRLAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT   +VD+     + + D+++ISYD FIRTTE  H    + ++KK+ D+GDIYKG 
Sbjct: 63  AKGVTPIEYVDEIVAGIKKLWDMMNISYDKFIRTTEDYHVKAVQKIFKKLYDQGDIYKGS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + +    ADG+  +    PV+  +EE YFF++S Y  KL+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQ---AADGKCPDCGR-PVEKTKEEAYFFKMSKYAPKLIKYIEDH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F+WGI +  D ++++YVWIDAL NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFNWGIPVTFDEKHVIYVWIDALANYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    +    K+WPAD+H++GKDILRFH IYWP  L++  LP+PKKVF HG++L  G K
Sbjct: 239 GYGSKNEELYNKYWPADVHLVGKDILRFHTIYWPIMLMALGLPVPKKVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +++  G DA+RY+L+REI  G DG ++ +   KR+NADLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVDNFGADAVRYYLLREIPFGSDGLFNNEIFIKRINADLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+ +M+ K +DG++  P    + D+ ++ +     +++ +NM +  I  AL  +  L++
Sbjct: 359 SRTCAMVEKYFDGVVQEPTKKEQIDDELIKLALETPEKVEKNMNDLRIPEALDNIWDLIT 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++Y D   PW L K  +  DR  TVLY  +E +R ++I +  ++P+ + K++  L
Sbjct: 419 RSNKYIDETTPWILAKDESKKDRLGTVLYNLLESLRIISICVSPYLPETSAKMYKQL 475


>gi|326789740|ref|YP_004307561.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540504|gb|ADZ82363.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 658

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/508 (42%), Positives = 326/508 (64%), Gaps = 10/508 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A   GV
Sbjct: 7   YITTPIYYPSNKLHIGHSYTTVAADAMARYKRLRGYDVMFLTGTDEHGQKIERRAAEDGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + FVD      +D+   +DISYD FIRTT+K H +T + ++KK+ DKGDIYK  Y G 
Sbjct: 67  TPQAFVDHIVDWIKDLWKTMDISYDKFIRTTDKEHEETVQKIFKKLYDKGDIYKSEYEGL 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+ ++EE YFF+LSAYQD+L+ + E +P+FI
Sbjct: 127 YCTPCESFFTEHQL---VDGKCPDCGR-PVEKVKEESYFFKLSAYQDRLIKHIEENPDFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F++ GL+DL +SR +F WGI +  DP +++YVW+DAL+NY++  GYL 
Sbjct: 183 QPNTRQNEMLNNFLRPGLEDLCVSRTSFKWGIPVEFDPGHVVYVWLDALSNYISALGYLQ 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D +  +FWPAD+H++GK+I+RFH I WPA L++ +LPLPK++F HG+++  G K+SKS
Sbjct: 243 ADDANFKRFWPADVHLVGKEIVRFHTIIWPAMLMAMDLPLPKQIFGHGWLVINGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            G V+DP  ++   G DA+RYFL+REIA G+DG +  + L  R+N+DLAN +GNL SR+V
Sbjct: 303 QGTVVDPSVLVGRYGSDAIRYFLLREIAFGQDGNFSNEALISRINSDLANDLGNLTSRTV 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K Y G +P      E D  +  V    + ++  NM+    + AL  +  ++  +++
Sbjct: 363 AMIEK-YFGTLPEVQEGNEFDVDVQKVVKEQIAKMESNMEKLFFNNALEDIWVIIRRMNK 421

Query: 427 YFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADEN 483
           Y D   PW L K   + A  + VLY   EVIR ++I+++ F+P+   KI+     V  E 
Sbjct: 422 YIDETMPWVLAKDEANHAKLAGVLYTLSEVIRIVSIMIEPFMPQTPEKIWAQFGIVRGEL 481

Query: 484 RCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             + S+ Q    P  +  K  + +FPR 
Sbjct: 482 TAWDSIHQFGALPRTVAAKKGENMFPRI 509


>gi|291537807|emb|CBL10918.1| methionyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 665

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/481 (44%), Positives = 319/481 (66%), Gaps = 13/481 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI +
Sbjct: 1   MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K +VD  +   + + D+++ SYD+F+RTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y DKL++Y 
Sbjct: 121 KGSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLINYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+ +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H +
Sbjct: 237 TKIGY--DADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS GNVI   ++ +  GVDA RYF++ E+    DG    D + +R N+DLA
Sbjct: 295 LLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R++SM  K +DG++ + G   E D  + +V +    ++ E M+N  +  A+ 
Sbjct: 355 NILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAIT 414

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+ A++I
Sbjct: 415 EVFNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRI 474

Query: 474 F 474
            
Sbjct: 475 L 475


>gi|257867079|ref|ZP_05646732.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873414|ref|ZP_05653067.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257877159|ref|ZP_05656812.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801135|gb|EEV30065.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807578|gb|EEV36400.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257811325|gb|EEV40145.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 668

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/521 (41%), Positives = 324/521 (62%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + + + LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEELGVDPQEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGKVIGGKAPSGHEVELVKESSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI +   P++++YVWID
Sbjct: 181 RLVEYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F H
Sbjct: 241 ALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNV+ P  ++E   +DALRY+L+R +  G DG +  +    R+N D
Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D  + +  + V+    E M       
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASKVTPFDSELSTTAANVVGRYHEAMDKMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL++V +L+S  ++Y D  +PW L K    RA  ++V+    E +R +AILLQ  + +  
Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKEEEKRAELNSVMVHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             IF  L +A      + L       G  +     PIFPR 
Sbjct: 481 ANIFQQLGLASVAMDLKDLRFGEFPSGTKVVAKGTPIFPRL 521


>gi|302390850|ref|YP_003826670.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202927|gb|ADL11605.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 644

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/511 (40%), Positives = 323/511 (63%), Gaps = 9/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YPN + HIGH Y    AD + +F  L G +    TG+DEHGQK+ K A+
Sbjct: 3   KDTFYVTTPIYYPNDKLHIGHTYTTTAADTVVKFKELQGYETELITGSDEHGQKLQKTAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    ++D   + F+++   L++ Y +F+RTT + H    + ++KKI DKGDIYK  
Sbjct: 63  EHGMEPLGYIDGIVKTFKELWSTLEVDYTEFVRTTSQEHKKDVQHIFKKIYDKGDIYKDK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y    E Y+ + E+ +  +    N    PV+W+EEE YFF++S Y+++LL + + +
Sbjct: 123 YEGYYCTPCETYWAERELDEEGNCPDCN---RPVEWVEEESYFFKMSEYEEQLLEFLDDN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P +RRNE+I+F++ GL+DL +SR +FDWGI +P D  +++YVW DAL +YLT  G
Sbjct: 180 PDFIQPAKRRNEMINFIEEGLEDLCVSRTSFDWGIPVPIDGDHVIYVWFDALISYLTGIG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +  + D     +WPAD+H++GKDILRFH I WPA L++A++ LPK+VF HGF+  +G K+
Sbjct: 240 FRRDED-KFGSYWPADVHIVGKDILRFHTIIWPAILMAADMELPKQVFGHGFLTVEGGKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP +++ + GVDA+RY+L+RE+A G DG Y  +   +R+N+DLAN +GNL++
Sbjct: 299 SKSKGNVVDPTKLVNDFGVDAVRYYLMREVAFGTDGSYSTESFIRRINSDLANDLGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+M+ + +DG+IP P + TE D  +     + L  + ++M+N     AL  + +++  
Sbjct: 359 RTVAMVEQYFDGVIPEPRSETEYDADLKKTSQQELAAMADDMENLQFSTALEHLWTVIRR 418

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480
            ++Y D   PW L K     D+  TVLY  +E +R  AI L+ F+P+   KI+  + +  
Sbjct: 419 TNKYIDQTTPWILAKDEDKQDKLGTVLYNLLEALRITAIALKPFLPEAPAKIWQQIGIKA 478

Query: 481 --DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             D+ R  +  +  L    +     DPIFPR
Sbjct: 479 DLDQQRWSEVEEWGLLEAGLEVNPGDPIFPR 509


>gi|222093808|ref|YP_002527857.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221237855|gb|ACM10565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 626

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/491 (43%), Positives = 323/491 (65%), Gaps = 16/491 (3%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DISYDD
Sbjct: 1   MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG---AD 146
           FIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +    D + +G     
Sbjct: 61  FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 120

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLK 205
           G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+ F+K GL+
Sbjct: 121 GKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 179

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H++GK
Sbjct: 180 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 239

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+DAL
Sbjct: 240 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 299

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFT 384
           RY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP      T
Sbjct: 300 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKENVT 359

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE++++     L+++ E M+N     AL+ +  LVS  ++Y D  +PW L K   DR 
Sbjct: 360 EFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDENDRE 419

Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQ--RLKPGFML 499
             ++V+    EV+RQ  I+L  F+    +K+F  L + DE    + SL     +  G  +
Sbjct: 420 KLASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTDEAHISWGSLSTIGCIPAGTKV 479

Query: 500 HKTFDPIFPRF 510
            K   PIFPR 
Sbjct: 480 EKG-QPIFPRL 489


>gi|325568422|ref|ZP_08144789.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158191|gb|EGC70344.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 668

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/521 (41%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + + + LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEELGVDPQEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKTAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGKVIGGKAPSGHEVELVKESSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI +   P++++YVWID
Sbjct: 181 RLVQYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNV+ P  ++E   +DALRY+L+R +  G DG +  +    R+N D
Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D  + +  + V+    E M       
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASKVTPFDSELSTTAANVVGRYHEAMDKMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL++V +L+S  ++Y D  +PW L K    RA  ++V+    E +R +AILLQ  + +  
Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKEEEKRAELNSVMVHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             IF  L +A      + L       G  +     PIFPR 
Sbjct: 481 ANIFQQLGLASVAMDLKDLRFGEFPSGTKVVAKGTPIFPRL 521


>gi|240145103|ref|ZP_04743704.1| methionine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202775|gb|EEV01060.1| methionine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 665

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/481 (44%), Positives = 319/481 (66%), Gaps = 13/481 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI +
Sbjct: 1   MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K +VD  +   + + D+++ SYD+F+RTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y DKL++Y 
Sbjct: 121 KGSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLINYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+ +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H +
Sbjct: 237 TKIGY--DADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS GNVI   ++ +  GVDA RYF++ E+    DG    D + +R N+DLA
Sbjct: 295 LLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R++SM  K +DG++ + G   E D  + +V +    ++ E M+N  +  A+ 
Sbjct: 355 NILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAIT 414

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+ A++I
Sbjct: 415 EVFNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRI 474

Query: 474 F 474
            
Sbjct: 475 L 475


>gi|307297529|ref|ZP_07577335.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916789|gb|EFN47171.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 635

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/515 (41%), Positives = 324/515 (62%), Gaps = 21/515 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++T I Y N++PHIG AY  I+ADV+AR+ RL G DV F TGTDEHGQK+   A  
Sbjct: 2   EKFYVTTPIYYINSEPHIGSAYSTIVADVIARYRRLSGYDVFFLTGTDEHGQKVLNEAIE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V  + + D+ +  F+ +   L+++ D F+RTT++ H  T +    K+ + GD+YKG Y
Sbjct: 62  RNVEAQKYCDEMAEKFKALWKELELTNDAFVRTTDEYHMKTVQTFVSKLKENGDVYKGKY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY + DE ++N++++    +G+        V+W+ EE YFFRLS Y D LL +Y+ +P
Sbjct: 122 EGWYCIPDETFWNEEDL---KEGRTCPECGREVKWVSEENYFFRLSKYNDILLRFYKENP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++  ++SGLKDLS++R +FDWG+ +PDDP++++YVW+DAL NYL+  GY
Sbjct: 179 QFVQPDFRRNEMLRILESGLKDLSITRTSFDWGVPMPDDPEHVIYVWVDALINYLSAIGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N D  + ++WPAD+H+IGK+I RFH+I WPA LLSA LPLPK++++HG++   G+KIS
Sbjct: 239 PHNIDHFE-RYWPADVHLIGKEINRFHSIIWPAMLLSAGLPLPKQIYAHGWLTVNGQKIS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN I P+  +   G DALRY+L+R+I  G+DG + +  L  R+NADLAN +GNL+ R
Sbjct: 298 KSLGNAISPVAFVRTYGNDALRYYLLRDIQFGRDGDFSETNLISRINADLANDLGNLLHR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +V MI K  DG +P        DE ++ +  +      E+M N    +AL  V  L+   
Sbjct: 358 TVVMIQKFNDGAVPERSITETIDEDLVELGEKTFSAYTESMDNMRFTQALESVWELIRFG 417

Query: 425 DRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++Y D  +PW++ K  P+   R  TVL+  V  ++ ++I+++  + + A +I   L    
Sbjct: 418 NKYIDLTEPWKMGK-KPEMKGRLDTVLHNLVCTLKNVSIMIEPVMFRTAREIRKRLGFGG 476

Query: 482 ----ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
               EN  +  +   +R+  G       +PIFPR 
Sbjct: 477 TMTLENVSWSDIVAGKRVSHG-------EPIFPRI 504


>gi|291537672|emb|CBL10784.1| methionyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 665

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/481 (44%), Positives = 319/481 (66%), Gaps = 13/481 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI +
Sbjct: 1   MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K +VD  +   + + D+++ SYD+F+RTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y DKL++Y 
Sbjct: 121 KGSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLINYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+ +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H +
Sbjct: 237 TKIGY--DADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS GNVI   ++ +  GVDA RYF++ E+    DG    D + +R N+DLA
Sbjct: 295 LLQGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R++SM  K +DG++ + G   E D  + +V +    ++ E M+N  +  A+ 
Sbjct: 355 NILGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAIT 414

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+ A++I
Sbjct: 415 EVFNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRI 474

Query: 474 F 474
            
Sbjct: 475 L 475


>gi|304407079|ref|ZP_07388733.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344066|gb|EFM09906.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 662

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/522 (42%), Positives = 324/522 (62%), Gaps = 21/522 (4%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E  K  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI 
Sbjct: 1   MSESNKSFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + AQ +G T   FVD+     +++   LDISYDD+IRTTE RH      ++ K+ ++GDI
Sbjct: 61  RKAQESGKTPLQFVDEIVLGIKELWKKLDISYDDYIRTTEDRHKRVVERIFTKLVEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y GWY    E+++ + ++    DG   +    PV+ ++EE YFF LS Y D+LL +
Sbjct: 121 YKGEYEGWYCTPCESFFPERQL---NDGNCPDCGR-PVELVKEESYFFSLSKYADRLLQH 176

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +E +PEFI P  R+NE+I+ F+K GL+D ++SR TFDWGIK+P+DP++++YVWIDAL NY
Sbjct: 177 FEENPEFIQPESRKNEMINNFIKPGLEDFAVSRTTFDWGIKVPNDPKHVVYVWIDALFNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GY  + DG   KFWPAD+H++GK+I+RFH IYW + L++ +LPLPKK+F+HG+ L 
Sbjct: 237 ISALGYDTSEDGLYRKFWPADVHLVGKEIVRFHTIYWTSMLMALDLPLPKKIFAHGWWLT 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS G VIDP+++I+  G+D LRYFL+RE+  G DG +  +   +R N DLAN +
Sbjct: 297 KEGKMSKSKGTVIDPVKLIDRYGLDVLRYFLLREVPFGSDGAFTPESFVERTNFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K +DG IP   G  T  D  +       ++ I   M+      AL  +
Sbjct: 357 GNLLNRTVAMIDKYFDGAIPAYTGDVTAFDVLLRQQAVESIEAIEAAMEKMEFSVALTAL 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             LVS  ++Y D  +PW L K    RA  ++ +Y   E +R ++I+LQ F+      ++ 
Sbjct: 417 WQLVSRTNKYIDETQPWVLAKDESKRAELASSMYHLAESLRIVSIVLQPFLTNAPRAMWA 476

Query: 476 ILFVA-------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L +        D  + F +L     PG       +P+F R 
Sbjct: 477 QLGIEAGELTTWDSAKSFGTL-----PGGTRVSKAEPMFMRL 513


>gi|307286738|ref|ZP_07566824.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502216|gb|EFM71500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165210|gb|EFU09227.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 677

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 322/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++  +GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVKQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++ F+K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|302873184|ref|YP_003841817.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688651|ref|ZP_07631097.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576041|gb|ADL50053.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 643

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/513 (41%), Positives = 326/513 (63%), Gaps = 8/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  YI+T I YP+A+ HIG+ Y  + AD LAR+ RL G DV+F TGTDEHGQKI +
Sbjct: 1   MSNEKTYYITTPIYYPSAKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT K +VD+     +D+  +++ISYD FIRTT+  H  T + ++K++ D+GDIY
Sbjct: 61  IAEEKGVTPKDYVDEIVAGIQDLWKLMNISYDKFIRTTDDYHKKTVQKIFKQLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ D +     DG+  +    PV+  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KGAYEGWYCTPCESFWTDTQ---AVDGKCPDCGR-PVETAKEEAYFFKMSKYADRLIEYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E+HPEFI P  R+NE+++ F++ GL+DL +SR TF WGI +  DP +++YVW+DAL+NY+
Sbjct: 177 ETHPEFIQPESRKNEMLNNFLRPGLQDLCISRTTFTWGIPVEFDPDHVVYVWMDALSNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  G+  + D    K+WP D+H++GKDI+RFH IYWP FL++    LPK+VF HG++L  
Sbjct: 237 SALGFDSDNDQLYKKYWPCDVHLVGKDIIRFHTIYWPIFLMALGQELPKQVFGHGWLLVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP+ ++   G DA+RY+L+ EI  G DG ++ +   K+VN+DLAN +G
Sbjct: 297 GGKMSKSKGNVVDPVVLVNHFGTDAVRYYLLHEIPFGSDGNFNSEIFIKKVNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +M++K +DG+I  P    + D  ++++   + +++   +    + +AL ++ +
Sbjct: 357 NLLSRTTAMVIKYFDGVIQPPTDKEDIDNELINIALDMPKKVEAAINELNLPQALDEIWT 416

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K    +A   TVLY  +E +R  ++ + +F+P+   KI + L
Sbjct: 417 LIRRANKYIDETTPWILAKDEDKKARLGTVLYNLIEALRFASVAVSSFLPETGTKIQEQL 476

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V        S     + G  L K  D IFPR 
Sbjct: 477 KVDVATWDSISAFDGTQAGVTLEKG-DVIFPRI 508


>gi|225850511|ref|YP_002730745.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646396|gb|ACO04582.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 624

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/509 (43%), Positives = 312/509 (61%), Gaps = 12/509 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y++T I Y N  PH+GHAY  + ADVLAR+ R  G+   F TGTDEHG KI K+A+
Sbjct: 3   RKKFYVTTPIYYVNDLPHLGHAYTTVAADVLARYFRQKGVKTFFLTGTDEHGLKIQKSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D   + F+++ +VL+ISYD FIRTT+  H    + +++K  D GDIY   
Sbjct: 63  EKGISPKELADITHKKFKELWEVLNISYDRFIRTTDPDHIKAVQYIFQKCYDNGDIYLSE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y  WY +  E +  + E+    D  Y    H  P + ++EE YFFRLS YQDKLL  Y+ 
Sbjct: 123 YESWYCVGCEEFKTETEI---KDYDYKCPVHLKPCEKVKEESYFFRLSKYQDKLLKLYQE 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
            P+FI+P  R+NEV+SFVK GLKDLS+SRK     WGI +P DP + +YVW DALTNYLT
Sbjct: 180 KPDFIMPEYRKNEVVSFVKQGLKDLSVSRKRERVKWGIPVPFDPDHTIYVWFDALTNYLT 239

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  +P+    +FWPAD+H++GKDILRFHA+YWPAFL+SA + +P+ VF+HG+   +G
Sbjct: 240 AVGYPPSPN----EFWPADVHIVGKDILRFHAVYWPAFLMSAGIEVPEMVFAHGWWTVEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP E  ++ GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GN
Sbjct: 296 HKMSKSLGNVVDPFEASQKYGVDQLRYFLMREVPFGLDGDFSKKAVIGRINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI K   G +P  G  ++ +E    +    ++   +++     ++AL  V   
Sbjct: 356 LFSRSLSMINKFNKGFVPGAGDISQLEEEYKELYRYTVENFDKHISKLEFNKALEIVWEF 415

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  +++Y    +PW+LKK      +T LY   + +  +  LL+ F+P       + L V 
Sbjct: 416 IDFLNKYIVKTEPWKLKKEGNSYLNTALYTVADGLLLITYLLKPFMPGKMETALEYLGV- 474

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +N   +        G  + K   P+FPR
Sbjct: 475 -DNLPSEMEPYSFPEGVKVKKKIKPLFPR 502


>gi|51894387|ref|YP_077078.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51858076|dbj|BAD42234.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 651

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/516 (43%), Positives = 318/516 (61%), Gaps = 19/516 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I YP+++ HIGH+Y  + AD LAR+HR  G +  F TGTDEHGQKI +AA   
Sbjct: 3   RFYITTPIYYPSSKLHIGHSYTTVAADALARYHRRLGHETYFLTGTDEHGQKIERAALAE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T   FVD+     +++   L ISYDDFIRTTE+RH    + ++K++ D+GDIYK  Y 
Sbjct: 63  GKTPIQFVDEIVAGIKELWAALHISYDDFIRTTEERHKKVVQKIFKQLYDQGDIYKSSYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY    E ++ + ++    +G        PV+W ++E YFFRLS Y D+LL Y E   +
Sbjct: 123 GWYCTPCETFWIESKL---KEGNLCPDCGRPVEWTKDESYFFRLSKYADRLLRYIE-ETD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NE+ISF+  GL+DL +SR T  WGI +P D +  +YVWIDAL+NY++  G+ 
Sbjct: 179 FIQPASRKNEMISFINQGLEDLCVSRSTVRWGIPVPFDEKQTIYVWIDALSNYISALGWG 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL--HKGEKI 303
              D    KFWPAD+H++GK+I+RFH I WP  L++  LPLPKKVF HG++L   + EK+
Sbjct: 239 TENDELYRKFWPADVHLVGKEIVRFHTIIWPCILMALGLPLPKKVFGHGWLLFGTQAEKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  +I+  GVDA+RY+L+RE+  G DG Y ++    R N DLAN +GNL+S
Sbjct: 299 SKSKGNVVDPFVLIDRYGVDAVRYYLLREVPFGADGTYTEEAFILRTNNDLANDLGNLLS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R+  MI K  DG +P P     SD+ ILS + ++VL+E +E M    I  AL  +  LV 
Sbjct: 359 RTTQMINKFSDGRVPEPDP--ASDDRILSDLAAQVLREFQEAMDRLEISSALVALWKLVD 416

Query: 423 EVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             ++Y D Q PW L + +P RA    TVLY   E +R L + L  F+ +   +I+D L +
Sbjct: 417 RANKYIDEQAPWALAR-DPGRAGQLRTVLYNLAETLRLLGVALTPFLVQTPERIWDQLGL 475

Query: 480 ADENRCFQSLDQR-----LKPGFMLHKTFDPIFPRF 510
                     ++      LKPG ++ +   P+FPR 
Sbjct: 476 EPAQVRTLPWEEAVAWGGLKPGTVIRRG-SPLFPRI 510


>gi|323140336|ref|ZP_08075268.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415194|gb|EFY05981.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 653

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/478 (46%), Positives = 306/478 (64%), Gaps = 12/478 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+   HIGHAY   IAD LARFHRL G DV F TG+DEHG KI + A+  GV
Sbjct: 7   YITTPIYYPSDNLHIGHAYCTTIADSLARFHRLKGEDVFFLTGSDEHGLKIQRKAKEKGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T   +VD    NF+ +   L+IS +DFIRT+++RHH   +   +KI ++GDIYK  Y G 
Sbjct: 67  TPIQYVDAIIANFKLLWKELNISNNDFIRTSQERHHKVVQDALQKIYEQGDIYKKNYKGL 126

Query: 128 YSLRDEAYYND---DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           Y +  E+Y+ +   DE +   D       H PV+ MEEE YFF++S YQD  L + E HP
Sbjct: 127 YCVPCESYWLERQLDENHCCPDC------HRPVEEMEEESYFFKMSKYQDWWLQFIEEHP 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+I+FVK GL+DL ++R TFDWGI +P D ++++YVW DAL NYLT   Y
Sbjct: 181 DFIQPASRRNEMINFVKQGLEDLCITRTTFDWGIPVPFDKKHVVYVWFDALLNYLTGIKY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D    K+WPA LH++GK+I+RFH I WP  L +  L +P++V+ HG+++  G+K+S
Sbjct: 241 -GTDDAFFHKYWPASLHLVGKEIVRFHTIIWPIMLHAMGLEMPQEVYGHGWLVVDGDKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVIDP+ +I+E G DA+RYFL+REI  G DG + +D L  RVNADLAN +GNL+ R
Sbjct: 300 KSKGNVIDPLGLIDEFGADAIRYFLLREINLGSDGNFSRDALITRVNADLANDLGNLLHR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +VSMI K + G++   GA    D+ + ++    +    + M N  I+ A+  V +L+S  
Sbjct: 360 TVSMIEKYHGGIVADTGASEPIDDELKALVKETVANYVKAMDNMEINTAIKGVWALISRA 419

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++Y D   PW L K     DR  TV+Y   E +R +AIL+  ++P  + KI+  L +A
Sbjct: 420 NKYIDETAPWILAKDEAKADRLKTVMYNLAETLRIVAILISPYIPTTSPKIYTQLGLA 477


>gi|330686067|gb|EGG97689.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/522 (41%), Positives = 330/522 (63%), Gaps = 17/522 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY + ++        K   G+  ++ H  V+ ++EE YFF +  Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVEPIYENGKIVGGKSPDSGHE-VELVKEESYFFNIKKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +F+WG+ +P +P++++YVWIDAL
Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++E  ENM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALDTVKEFHENMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D   PW L K  +  D    V+   VE IR   +LL+ F+     +
Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFITHAPKE 481

Query: 473 IFDILFVAD-ENRCFQSLDQ---RLKPGFMLHKTFDPIFPRF 510
           IF  L + + E   F SL+      +P  ++ K   PIFPR 
Sbjct: 482 IFKQLNINNPELMEFSSLETYGALTEPITVIAKP-TPIFPRL 522


>gi|23097501|ref|NP_690967.1| methionyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|25009346|sp|P59079|SYM_OCEIH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|22775724|dbj|BAC12002.1| methionine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 673

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/527 (40%), Positives = 326/527 (61%), Gaps = 21/527 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIG+AY  I  DV+AR+ R+ G DV + TG+DEHGQKI +
Sbjct: 1   MARENAFYITTPIYYPSGKLHIGNAYTTIACDVMARYKRMRGFDVFYLTGSDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   ++ K +VD  +   + + + L+IS D FIRTTE++H      ++++  ++GDIY
Sbjct: 61  KAKEMNISPKAYVDDMAEGMKKLWNTLEISNDKFIRTTEEQHKKVVADIFERFLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE +Y +   ++V +  DG     +     +PV+ ++EE YFFR+S Y 
Sbjct: 121 LDEYEGWYSVPDETFYTETQLEDVERDDDGNVIGGKSPDSGHPVELIKEESYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +PEFI P  R+NE+I+ F+K GL+DL++SR TF WG+++P +P++++YVWI
Sbjct: 181 DRLLKFYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFSWGVQVPSNPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DALTNY+T  GY         KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALTNYITALGYGSEDTSLYDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+ P  ++E  G+DALRY+L+RE+A G DG +  +    RVN 
Sbjct: 301 HGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMREVAFGSDGVFTPEDFISRVNY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K +DG +P   G  T  D  + +  +  ++E  ++M+     
Sbjct: 361 DLANDLGNLLNRTVAMINKYFDGKVPEFKGEVTSFDGELQTTANNAVKEYEKHMEGMQFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL QV  L+S  ++Y D  +PW + K    R   ++V+    E +   A++LQ F+   
Sbjct: 421 DALKQVWILISRANKYIDETEPWIVAKDEGRRNELASVMVHLAESLHAAALMLQPFLTHA 480

Query: 470 ANKIFDILFVADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510
             KI + L + +E      LD              + K   PIFPR 
Sbjct: 481 PKKIAEQLGLGEE----YGLDWGTIGFGNFPENTTVVKKGTPIFPRL 523


>gi|317050747|ref|YP_004111863.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316945831|gb|ADU65307.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 629

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/473 (42%), Positives = 305/473 (64%), Gaps = 9/473 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PHIGHAY  +  DV ARF RL G DV+F TGTDEHG KI +AA+  G 
Sbjct: 6   YVTTPIYYVNDVPHIGHAYTTVACDVAARFQRLMGRDVMFLTGTDEHGMKIEQAARKNGE 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     ++  + F+++   LDIS+DDFIRTTEKRH      L++++ ++GDIY G Y GW
Sbjct: 66  TPIELANRVVKRFQELWTTLDISHDDFIRTTEKRHEMGVHKLFRQLREQGDIYLGEYEGW 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQ--HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           Y    E+++ + +V     G+  N       V  ++E+ YFFR+S Y + LL + +++P 
Sbjct: 126 YCTPCESFWTETQV-----GEAINCPDCGRSVDKLKEKSYFFRMSKYAEPLLEHIKTNPG 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+I F++SGL+DLS+SR TFDWGIK+PDDP++++YVW DAL+NY+T  GY 
Sbjct: 181 FIQPESRRNEIIRFIESGLRDLSISRTTFDWGIKVPDDPEHVIYVWFDALSNYMTAIGYG 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + +  + ++WPA  HV+GKDILRFH +YWP FL++A + LP++VF+HG+   +G+K+SK
Sbjct: 241 SDEEKWQ-RYWPASAHVVGKDILRFHTVYWPTFLMAAGIELPRQVFAHGWWTVEGKKMSK 299

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N +DP  ++E+ GVD +RYFL+RE+  G DG +    L  R+N+DLAN +GNL+SR+
Sbjct: 300 SLMNAVDPNILVEKFGVDPIRYFLLREVPFGLDGDFSMQALVGRINSDLANDLGNLLSRT 359

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             M+ + +DG+ P  G   E +++++      ++  R +M+    +RAL ++  +V  ++
Sbjct: 360 SGMMFRYFDGLTPASGPLQEREQALIQATGERMEGYRADMEVMAFNRALMKIWEIVGSLN 419

Query: 426 RYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y    +PW L K        T L  T E +R +A  +  F+P  + KI   L
Sbjct: 420 KYIVETEPWALHKAGKTTELQTSLATTAEGLRVIANAVYPFMPSSSRKILQAL 472


>gi|312142731|ref|YP_003994177.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903382|gb|ADQ13823.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 652

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/472 (43%), Positives = 319/472 (67%), Gaps = 3/472 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+ + HIGHAY  + AD +AR+ ++ G D +F TG+DEHGQKI + A 
Sbjct: 3   KDTYYVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMHGYDTMFLTGSDEHGQKIERKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G  TK +VD+   +F+++   LDI YD FIRTTE+RH    + ++KK+ DKGDIYKG 
Sbjct: 63  AEGKDTKEYVDEIVASFKELWKKLDIDYDYFIRTTEERHEKVVQKIFKKLYDKGDIYKGK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++++ ++ +    +     H PV+W+EE+ YFF++S Y D+LL + + H
Sbjct: 123 YEGWYCTPCESFWSERQLEEEQGEKVCPDCHRPVEWVEEQSYFFKMSKYADRLLEHIKEH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISF+++GL DLS+SR TFDWGI +P D  +++YVWIDAL+NY+T  G
Sbjct: 183 PQFIEPESRRNEMISFIENGLDDLSVSRTTFDWGIPVPIDEDHVIYVWIDALSNYITAIG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +P+  +  +WPADLH++GKDILRFH + WP  L++ +L LPK+VF HG++L K  K+
Sbjct: 243 YQSDPENFE-HYWPADLHLVGKDILRFHTVIWPIILMALDLELPKQVFGHGWLLSKSGKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+ ++ + G DA+RY+L+RE+A G DG Y  + L +R+N+DLAN +GNL++
Sbjct: 302 SKSKGNVVDPVVLVNDFGKDAIRYYLLREVAFGTDGTYSTEALIQRINSDLANDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+VSM+ + +D  IP  G     D+ ++ + +++  E+ + M+      AL ++  LV  
Sbjct: 362 RTVSMVEQYFDSNIPVVGEKEAVDQELIDLTAKIKVEVEKEMEELKYTVALERIWDLVRR 421

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++Y D   PW L +  +   R  TVLY  +E +R +A++L+ F+ +   KI
Sbjct: 422 TNKYIDQTTPWILGRDESKKSRLGTVLYNLLESLRIIAVMLKPFLTETPLKI 473


>gi|239637476|ref|ZP_04678450.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596921|gb|EEQ79444.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 656

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/522 (41%), Positives = 330/522 (63%), Gaps = 17/522 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE----VYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY + +    VY+      G+  ++ H  V+ ++EE YFF +  Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLVEPVYENGKIVGGKSPDSGHE-VELVKEESYFFNIKKYTDRL 181

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L +Y+ +P+FI P  R+NE+I+ F+K GL+DL++SR +F+WG+ +P +P++++YVWIDAL
Sbjct: 182 LEFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+
Sbjct: 242 VNYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLA
Sbjct: 302 ILMKDGKMSKSKGNVVDPNVLIDLYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R++SMI K + G +P   G   E DE + ++    ++E  ENM++     AL
Sbjct: 362 NDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKEFHENMESLQFSVAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D   PW L K  +  D    V+   VE IR   +LL+ F+     +
Sbjct: 422 STVWKFISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFITHAPKE 481

Query: 473 IFDILFVAD-ENRCFQSL---DQRLKPGFMLHKTFDPIFPRF 510
           IF  L + + E   F SL       +P  ++ K   PIFPR 
Sbjct: 482 IFKQLNINNPELMEFSSLATYGSLTEPITVITKP-TPIFPRL 522


>gi|241888882|ref|ZP_04776188.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864558|gb|EER68934.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 666

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/526 (40%), Positives = 324/526 (61%), Gaps = 25/526 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGHAY  +  D L R+ +L G D  F TGTDEHGQKI + AQ
Sbjct: 3   KKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYDTYFLTGTDEHGQKIQQKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + +VD+  ++ + + + +DI+Y  FIRTT+  H      ++ K+ +KGDIY G 
Sbjct: 63  EKGISEQAYVDEMIKDIKKLWEAMDINYSKFIRTTDDYHETAVAEIFDKLVEKGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE Y+ +    EV++  +G          N V+ + EE YFF++S Y D+L+
Sbjct: 123 YKGWYSISDEEYFTETQLQEVFRDEEGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFILP  R+NE+++ F+K GL+DL+++R TFDWG+K+  +P++++YVWIDAL 
Sbjct: 183 KYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           NY+T  GY     GS+    K+WPAD+ V+GK+I+RFH IYWP  L++ +LPLPKK+F+H
Sbjct: 243 NYITALGYATG--GSEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKIFAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP  +IE  G+D+ RY+L+RE+  G+DG +  +    R+N+D
Sbjct: 301 GWLLMKDGKMSKSKGNVVDPYMLIERYGLDSARYYLLREVPFGQDGIFTPESFIDRINSD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           L+N +GNL++R++SMI K   G+IP      TE D  ++++   V+ E  E M+N    +
Sbjct: 361 LSNDLGNLLNRTISMINKYCGGVIPKFVEPTTEFDRELIALSKEVIAEYEEYMENMQFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V   +S  ++Y D   PW L K   N      V+    E +R   IL+   + K  
Sbjct: 421 ALESVWKFISRTNKYIDQTTPWILAKDEENQPELDKVMNYLAESLRIATILIAPALTKAP 480

Query: 471 NKIF------DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +I       + L V +  + F   D  +K   ++ K   PIFPRF
Sbjct: 481 TEIAKQLGIREDLLVFESAKTFGVFDGTVK---VVEKP-TPIFPRF 522


>gi|225849056|ref|YP_002729220.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643562|gb|ACN98612.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 626

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/509 (44%), Positives = 317/509 (62%), Gaps = 13/509 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+T I Y N  PH+GHAY  I  DV+AR++R  G+D  F TGTDEHGQKI KAA+
Sbjct: 2   QNKFYITTPIYYVNDVPHLGHAYTTIACDVMARYYRQKGVDTFFLTGTDEHGQKIQKAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K   D+   +F+++ + L+ISYD FIRTT+  H    + +++K  + GDIY   
Sbjct: 62  EKGIHPKELADKTHLSFKNLWEKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLAE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y  +Y +  E +  + E+    D  Y    H  P + ++EE YFFRLS Y +KLL +YE 
Sbjct: 122 YESYYCVGCEEFKTETEI---KDYDYKCPIHLKPCEKVKEESYFFRLSKYTEKLLEFYEK 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +P+FI P  RRNEV+SFVK GLKDLS+SRK     WGI +P D  + +YVW DALTNYLT
Sbjct: 179 NPDFIQPDFRRNEVVSFVKQGLKDLSVSRKKDRVWWGIPVPFDESHTIYVWFDALTNYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY DN +    KFWPAD+HV+GKDILRFHA+YWPAFL+SA + +PKKVF+HG+   +G
Sbjct: 239 AVGYPDNLN----KFWPADVHVVGKDILRFHAVYWPAFLMSAGIEIPKKVFAHGWWTVEG 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP +  +E GVD LRYFL+RE+  G DG +    +  R+N+DLAN +GN
Sbjct: 295 HKMSKSLGNVVDPFKAADEYGVDQLRYFLLREVPFGLDGDFSNQAVVNRINSDLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVSRS++MI K  +G I      T+ ++   ++  + ++   + + N    R+L +V   
Sbjct: 355 LVSRSLTMIQKFQEGNILPYTQLTDLEDEYKNIYEKTIENFDKYLSNLEFSRSLEEVWQF 414

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  +++Y    +PW+L K N +   TVLYV  + I  +  +L+ F+P    KI + L + 
Sbjct: 415 IDWLNKYIVKVEPWKLNKENKEYLKTVLYVLADGIYAILWMLKPFMP---TKIQEALNML 471

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             N    S+     P  +  +   P+FPR
Sbjct: 472 GYNEVKNSIQPFSLPTNIKIQEVKPLFPR 500


>gi|326804011|ref|YP_004321829.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650118|gb|AEA00301.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 666

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/518 (41%), Positives = 326/518 (62%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y++T I YP+ Q HIG++Y  I AD +AR+ RL G +V F TG DEHG KI + A+
Sbjct: 5   KEPFYVTTPIYYPSGQLHIGNSYSTIAADTIARYKRLMGHEVFFLTGADEHGLKIQQKAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD+ +   + +   LDIS D FIRTT+  H    + +++++ D+GDIY G 
Sbjct: 65  EEGISPKAYVDRMAEGMQKLWKSLDISNDKFIRTTDDYHVKAVQDIFEQLLDQGDIYLGE 124

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE Y+ +    EVY+  DG+    +    + V+ ++EE YFF++S Y D+LL
Sbjct: 125 YEGWYSVSDEEYFTETQLAEVYRDDDGKVIGGKAPSGHEVELVKEESYFFKMSKYADRLL 184

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YYE HP+FI P  R+ E+I+ F+K GL+DL+++R +F WGI +  +P++++YVWIDAL 
Sbjct: 185 QYYEDHPDFIQPESRKKEMINNFIKPGLEDLAVTRTSFSWGIPVRSNPKHVIYVWIDALA 244

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D    KFWPA++H++GK+I+RFH IYWP  L++ +LPLPK+VF HG++
Sbjct: 245 NYITALGYGSEDDSRYQKFWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWL 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L +  K+SKS GNV+ P  +I+  G+DALRY+L+RE+  G DG +  D    R+N DLAN
Sbjct: 305 LMQDGKMSKSKGNVVYPEMLIDRYGLDALRYYLMREVQFGSDGVFTPDNFVNRINFDLAN 364

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R++SM+ K   G     PG  T+ D  + +V    ++    NM N     AL 
Sbjct: 365 DLGNLLNRTISMLNKYQAGRAGAYPGQVTDYDADLEAVIEDNVRAYFGNMDNFHFSLALD 424

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
               ++S  ++Y D   PW L K + ++A   +VLY  V+ +R +AIL+Q  + +    I
Sbjct: 425 NTWKIISRANKYIDETMPWVLAKDDSNQAELQSVLYHLVDALRIIAILIQPVMTQTPKLI 484

Query: 474 FDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
           F+ L ++D +  F SL+  L P    +    +PIFPR 
Sbjct: 485 FEQLGISDSDHSFASLEIGLYPAAAQVIAKGEPIFPRL 522


>gi|182420024|ref|ZP_02951258.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669576|ref|ZP_04529556.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376061|gb|EDT73648.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655020|gb|EEP52580.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 647

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/473 (43%), Positives = 305/473 (64%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKPFYITTPIYYPSTKLHIGNTYTTVAADAIARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQDIFKKLYDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++ F++ GL+DL +SR +FDWG+ +  D ++++YVWIDAL+NY+T  
Sbjct: 182 PHFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDEKHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+MI K +DG IP      E D+ ++++      ++ E +    +  AL  V  L+ 
Sbjct: 362 SRTVAMIEKYFDGEIPAQAEKGEFDDELINLALSTPAKVEEAVTELNLPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K    +A   TVLY  +E +R  ++++ AF+P  A KI
Sbjct: 422 RANKYIDETTPWILAKDEDKKARLGTVLYNLIESLRFASVMISAFLPDTAKKI 474


>gi|310657778|ref|YP_003935499.1| methionyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824556|emb|CBH20594.1| methionyl-tRNA synthetase [Clostridium sticklandii]
          Length = 651

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/509 (41%), Positives = 314/509 (61%), Gaps = 9/509 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIGH Y  + AD +AR+ R  G DV F TGTDEHG+KI K A    
Sbjct: 6   FYVTTPIYYPSGRLHIGHTYTTVAADAIARYKRFTGFDVRFLTGTDEHGEKIQKTAAEKK 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  K ++D    + + + + ++ISYDDFIRTT++RH    + +++K+ DKGDIY G Y G
Sbjct: 66  MMPKDYLDGMIEDIKKLWETMEISYDDFIRTTDERHEKAVQKIFQKLYDKGDIYLGEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E+ + D +V  G +    + +   VQ  +E  YFF+LS YQ  L+ YY SHP+F
Sbjct: 126 WYCIPCESLWTDTQV--GEEHLCPDCKRE-VQKKKESSYFFKLSKYQQPLVDYYNSHPDF 182

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
             P  R+NE+++ F+ +GL DLS+SR TFDWGIK+P D ++++YVWIDAL NY+T  GYL
Sbjct: 183 CFPESRKNEMLNNFINAGLDDLSVSRTTFDWGIKVPFDDKHVIYVWIDALCNYITALGYL 242

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              +    K+WPA++ ++GK+I+RFH I WPA L++ +LPLP KV+ HG+IL   +K+SK
Sbjct: 243 SEDESLMEKYWPANMQIVGKEIVRFHTIIWPALLMALDLPLPDKVYGHGWILFSEDKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN++ P  +IE  G+DAL+YFL++E   G+DG Y       R+N+DL N +GNL+SR+
Sbjct: 303 SKGNIVYPEPIIERYGIDALKYFLLKEFTFGQDGNYTNRNFLTRINSDLVNDLGNLLSRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           VSMI K  D ++P P  F      +  V S +  ++ + M     + AL ++  +V   +
Sbjct: 363 VSMIEKYNDSIVPEPKVFDSVHAELKKVASSMPAKVDDAMNRMQFNEALEEIWKVVRRSN 422

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y D   PW L K  T  D   TVLY   E +R + +++   +   A KIF+ L   +E 
Sbjct: 423 KYVDETMPWVLAKDETKKDELDTVLYNLAEALRLVTVMISPLLHITAKKIFEQLSAGEEI 482

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           R ++S      LKPG  + K  + +FPR 
Sbjct: 483 RTYESALSFGGLKPGTKVAKG-EILFPRL 510


>gi|28210009|ref|NP_780953.1| methionyl-tRNA synthetase [Clostridium tetani E88]
 gi|38258346|sp|Q899D9|SYM_CLOTE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28202444|gb|AAO34890.1| methionyl-tRNA synthetase [Clostridium tetani E88]
          Length = 641

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/479 (42%), Positives = 316/479 (65%), Gaps = 7/479 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIG+ Y  + AD LARF RL G DVLF TGTDEHGQKI + A+
Sbjct: 3   KKTFYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGHDVLFLTGTDEHGQKIQRVAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K ++D    + +++   ++ISYD FIRTT+  H ++ + ++KK+ ++GDIYKG 
Sbjct: 63  EKGLKPKEYLDNMVDSIKELWKSMNISYDKFIRTTDDYHIESVQKIFKKLYEQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    D         PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 123 YEGWYCTPCESFWTESQL----DDHNCPDCGRPVEKTKEEAYFFKMSKYADRLIKYIEEN 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PHFIQPESRKNEMLNNFLKPGLQDLCISRTSFDWGIPVSFDNKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPA++H++GKDILRFH IYWP  L++  + LPK+VF HG++L  G K
Sbjct: 239 GYNSDNQELLEKFWPANVHLVGKDILRFHTIYWPIMLMALGIELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +++  G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVDHFGEDTVRYYLLREIPFGSDGLFNNELFIKKINSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K ++G++P P A    D+ ++++     +++  NM+   I   L ++ +L+ 
Sbjct: 359 SRTVAMVQKYFNGIMPAPIAKEPIDDELINLALDTREKVENNMEKLKIPEVLDEIWTLIG 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             ++Y D   PW L K     DR  TVLY   E +R +++L+ AF+PK + +I + L V
Sbjct: 419 RANKYIDETTPWILAKDEDKKDRLGTVLYNLSETLRIISVLISAFIPKTSERINEQLNV 477


>gi|118580084|ref|YP_901334.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502794|gb|ABK99276.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 506

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/513 (42%), Positives = 322/513 (62%), Gaps = 16/513 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TG+DEHGQK+ KAA 
Sbjct: 2   KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLMGYDVYFLTGSDEHGQKVEKAAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T     D+  + ++ + + L IS +DFIRTT++RH      L+  I ++GDIY G 
Sbjct: 62  TAGETPLELADRVVKRYQALWERLGISNNDFIRTTQERHKKGVSQLFSLIMERGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + ++ +          + PV+ ++EE YFFR+S YQ++LL++ E++
Sbjct: 122 YEDWYCTPCETFWPETQLIEDRCPDC----NRPVEKLKEESYFFRMSKYQEQLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  +RNE+ISFVK GL+DLS+SR TF WGI +P + ++I+YVW DALTNYLT  G
Sbjct: 178 PDFIQPKSKRNEIISFVKEGLRDLSISRTTFSWGIPVPGNDKHIVYVWFDALTNYLTALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D+      +FWPA++H+IGKDILRFH +YWP FL++A LPLP+KVF+HG+   +G+K+
Sbjct: 238 YPDS-TAEYGRFWPANVHLIGKDILRFHTVYWPTFLMAAGLPLPEKVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  +I++ GVD +RYFL+RE+  G DG +    L +R+N+DLAN +GNL+S
Sbjct: 297 SKSLQNVVEPNMLIDKYGVDVVRYFLMREVPFGLDGDFSHTALIQRLNSDLANDLGNLLS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M +K + G++P     TE D S+    S ++  + + M      +AL  +  ++S 
Sbjct: 357 RSTAMAVKYFGGILPAATELTEIDHSLQEKTSAMIAAVDKFMDELAFSKALQAIWEVISA 416

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--- 478
            ++Y D   PW L K     DR +TV+Y  +E  R    +L AF+P    K    L    
Sbjct: 417 GNKYIDDCAPWVLAKDPAQKDRLATVMYCLLESQRIAHCILSAFLPATTAKALASLGWDG 476

Query: 479 -VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            ++ E+  +  L +    G  + K  + +FPR+
Sbjct: 477 EISRESLAWGGLQE----GTTITKA-EALFPRY 504


>gi|251796284|ref|YP_003011015.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543910|gb|ACT00929.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 663

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/517 (41%), Positives = 325/517 (62%), Gaps = 15/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A
Sbjct: 4   DKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVWYLTGTDEHGQKIERNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++   + + FVD      +++   L+IS DDFIRTTE RH +    ++ ++  + DIYKG
Sbjct: 64  KDKNKSPQQFVDDIVVGIKELWSKLEISNDDFIRTTEPRHKEAVEKIFAQLLKQDDIYKG 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++  G           PV+ ++EE YFFR+S Y D+LL +YE 
Sbjct: 124 EYEGWYCTPCESFFLERQLVNGNCPDC----GRPVELVKEESYFFRMSKYADRLLKHYEE 179

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+ F+K GL+DL++SR TFDWGIK+P DP++++YVWIDAL+NY+T 
Sbjct: 180 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALSNYITA 239

Query: 242 TGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY    +GS     +FWPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF+HG++L 
Sbjct: 240 LGY--GKEGSSDLYDRFWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFAHGWLLM 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+DA+RY+L+RE+  G DG +  +    R+N DLAN +
Sbjct: 298 KDGKMSKSKGNVVDPVTLIDRYGLDAVRYYLLREVPFGSDGTFTPENFVDRINFDLANDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K +DG IP  G   T  DES+  +    ++++  +M+      AL+ +
Sbjct: 358 GNLLNRTVAMIDKYFDGEIPAYGGNVTAFDESLQVLAVETVRQVESSMETMEFSVALSAI 417

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS  ++Y D   PW L K    +   ++V+Y   E +R ++ILLQ ++     +++ 
Sbjct: 418 WQFVSRTNKYIDETSPWALAKDEAKKGELASVMYHLAESLRIISILLQPYLTHAPRELWR 477

Query: 476 ILFVADENRCFQSLDQRLK--PGFMLHKTFDPIFPRF 510
            L + +         +R    PG        P+FPR 
Sbjct: 478 QLGLEEGELTAWESTKRFGQLPGGTRVSKGAPVFPRL 514


>gi|260424613|ref|ZP_05732665.2| methionine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402545|gb|EEW96092.1| methionine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 676

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/521 (41%), Positives = 331/521 (63%), Gaps = 18/521 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ K YI+T I YP+A+ HIGH Y   IAD +ARF RLDG +V+F TG+DEHGQKI +
Sbjct: 30  MTEKPKYYITTPIYYPSAKLHIGHTYCTSIADSMARFKRLDGYEVMFLTGSDEHGQKIEQ 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ +GVT   +VD     F+ +   L+IS DDFIRTTE+RH +  ++L+++  D GDIY
Sbjct: 90  KAEESGVTPIEYVDNIVALFKQLWKELNISNDDFIRTTEERHREVVQMLFQRAYDNGDIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY + DE ++ ++++              P+Q + EE YFF++S Y D+ + + 
Sbjct: 150 LGKYEGWYCIPDETFWPENKL---TPEHLCPDCGRPLQRISEEAYFFKMSKYADRWMKFI 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I FVK GL+DL +SR +F WGI +P DP++++YVW DAL NY+T
Sbjct: 207 EENPDFIQPASRKNEMIQFVKGGLEDLCVSRTSFTWGIPVPFDPKHVVYVWFDALVNYIT 266

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G +DNP+  K +FWPAD+H++GK+I+RFH+I WP  L+S  + LPKK++ HG+++  G
Sbjct: 267 AAGIIDNPEKFK-RFWPADVHLVGKEIVRFHSIIWPIMLMSLGIELPKKIYGHGWLIVDG 325

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DPI +++E G DA+RY+L+ +I  G+DG + ++ L  R+N+DL+N +GN
Sbjct: 326 EKMSKSKGNVVDPIPLLQEFGSDAIRYYLLNDIQLGQDGNFSRERLINRINSDLSNDLGN 385

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-------LQEIRENMQNQLIHRA 413
           L+ RS+SM+ K  +G++    A    D SI  V + +       LQ+ R  M N  I+ A
Sbjct: 386 LLHRSLSMVEKYRNGVLVHGDA--SVDPSIRKVSAEIEKNAEATLQKFRNGMDNWKINDA 443

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           +  V + +  +++Y D   PW L K      +   VLY   E +R ++++++  +P  A 
Sbjct: 444 IKSVWTFIRSLNKYIDVTMPWVLAKDKAKDPALDAVLYHLCEGMRFVSLMVEPVIPIAAK 503

Query: 472 KIFDILFVAD-ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           KI+  L + + E   ++ L    +  G  + K   PIFPR 
Sbjct: 504 KIWSQLGLVNFEKANYKDLVWGGIVDGTKVAKGL-PIFPRI 543


>gi|310825918|ref|YP_003958275.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308737652|gb|ADO35312.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 641

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/510 (40%), Positives = 320/510 (62%), Gaps = 8/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y++T I YP++  HIGH Y  + AD L RF  L G D    TG DEHGQKI K A+
Sbjct: 2   KEKYYVTTPIYYPSSDLHIGHTYTTVAADTLKRFKALQGYDAYMITGIDEHGQKIEKVAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + FVD+ +    ++  ++ I +D  IRTT+  H  T + ++KK+ D+GDIYKG 
Sbjct: 62  EKGMSAQAFVDEEAARIAELWKLMRIDHDQLIRTTDPEHMKTIQRIFKKLYDQGDIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +    PV+   EE YFF++S Y D+LL + E+H
Sbjct: 122 YEGWYCTPCESFWTESQI---VDGKCPDCGL-PVEMASEEAYFFKMSKYADRLLEHIETH 177

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+I+ F+K GL+DL +SR +F WG+ +  DP++++YVWIDAL NYL+  
Sbjct: 178 PDFIKPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALPNYLSAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GYL++      ++WPA++H++GKDI+RFH IYWP  L++ +LPLP +++ HG+IL KG K
Sbjct: 238 GYLNDKPDLMERYWPANVHLVGKDIIRFHTIYWPIMLMALDLPLPNQIYGHGWILLKGGK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P+E+  + GVDALRY+L+RE+  G DG Y ++ L  R+N+DLAN +GNL+
Sbjct: 298 MSKSVGNVVNPVELAGKYGVDALRYYLLREMKDGADGVYSEELLINRINSDLANDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+ +M +K +DG IP        D  ++ +     +     M      RAL  V  LV 
Sbjct: 358 SRTAAMTVKYFDGKIPGQREAAALDSELIKLAQDTPEVFAGYMDKVDFSRALEAVWRLVG 417

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D  +PW L K   N  R + V+Y   E +R  A+++   +P+   KI + L V 
Sbjct: 418 RTNKYIDETEPWILYKDPKNHSRLAAVMYNLTEALRFTAVMVGPVMPETGRKILESLNVP 477

Query: 481 DENRCFQSLDQRLK-PGFMLHKTFDPIFPR 509
           +  R ++SL+   + P  +  +  D +FPR
Sbjct: 478 ETLRTWKSLEVFGQYPENIKIENCDVLFPR 507


>gi|150387962|ref|YP_001318011.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149947824|gb|ABR46352.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 655

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/509 (41%), Positives = 320/509 (62%), Gaps = 10/509 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+A+ HIGH Y  + ADVLARF R  G DV F TGTDEHG+KI +AAQ  G+
Sbjct: 7   YLTTPIYYPSAKLHIGHTYTTVAADVLARFKRTRGYDVQFLTGTDEHGEKIQEAAQKNGM 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K +VD+     + +   +DISYD FIRTT++ H    + +++ + +KGDIYK  Y GW
Sbjct: 67  NPKAYVDEIVEEIKKVWKSMDISYDIFIRTTDEEHERAVQKIFQTLYEKGDIYKSEYEGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    + +       P    +EE YFF+LS YQD+L+ ++E +PE  
Sbjct: 127 YCTPCESFWTETQL---KEDKGCPDCGRPAHLAKEEAYFFKLSKYQDRLIEHFEKYPEIC 183

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F++ GL+DL +SR TFDWGI +P DP++++YVW DA+ NY+T  GY  
Sbjct: 184 YPESRKNEMLNNFLRPGLEDLCVSRTTFDWGIPVPFDPKHVIYVWFDAVCNYITALGYTS 243

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +    K+WPA++H++ K+I+RFH I WPA L++  +PLPK V+ HG+IL   +K+SKS
Sbjct: 244 ENEEQYKKYWPANVHLVAKEIVRFHTIIWPAILMALEVPLPKMVYGHGWILFGSDKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN++ P  +IE  G+DAL+YFL+RE   G+DG Y       R+NADLAN +GNLVSR+V
Sbjct: 304 KGNIVYPEPLIERYGIDALKYFLLREFTFGQDGNYTNRTFVTRLNADLANDLGNLVSRTV 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K   G+IP P    E DE + +V +    ++ + +     H AL ++  +V   ++
Sbjct: 364 AMIEKYNSGIIPEPKVAGEFDEDLRTVATGAAAKVEKAIDQLQFHEALEEIWKVVRRTNK 423

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADEN 483
           Y D   PW L K   N +R +TVLY   + +R +++L+Q F+    NKI++ L + A++ 
Sbjct: 424 YIDETTPWILAKDEENKERLNTVLYHLADTLRIVSVLIQPFMEATTNKIWEQLGIDANQG 483

Query: 484 RCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
             ++  SL  ++  G  + K  + +FPR 
Sbjct: 484 TTWEDASLFNQIPSGVKVRKG-ESLFPRL 511


>gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
 gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
          Length = 690

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/473 (43%), Positives = 308/473 (65%), Gaps = 7/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIGH+Y  +  DV+AR+ R+ G DV+F TGTDEHGQKI + A  
Sbjct: 38  KTFYITTPIYYPSDKLHIGHSYCTVATDVMARYKRMQGFDVMFLTGTDEHGQKIEQKALA 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + +VD+     +++ ++L+IS D F+RTT+  H ++ + ++K + DKG IYKG Y
Sbjct: 98  AGVTPQAYVDKIVDGIKELWNLLNISNDRFVRTTDDYHVESVQKIFKDLYDKGYIYKGSY 157

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E+++ D ++    DG+  +     V   EEE YFF+LSA+ D++L  YE +P
Sbjct: 158 KGKYCTPCESFWTDSQL---VDGKCPDCGRE-VADAEEEAYFFKLSAFSDRILKLYEDNP 213

Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F+ P  R NE+I+ F+K GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  G
Sbjct: 214 QFMEPQSRMNEMINNFIKPGLEDLCVSRTSFKWGIPVTFDPKHVVYVWVDALTNYITALG 273

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +       K+WPAD+H +GK+I+RFH I WPA L++ +LPLPKKVF HG++L +G K+
Sbjct: 274 YGNGRYHDFEKYWPADVHFVGKEIIRFHTIIWPAMLMALDLPLPKKVFGHGWLLLEGGKM 333

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+ +++  GVDA+RYFL+RE   G DG +  + L  R+NADLAN +GNLVS
Sbjct: 334 SKSKGNVVDPVVLVDRYGVDAIRYFLLREFPFGSDGLFSNESLITRINADLANDLGNLVS 393

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RSV+M  K +   +P        D+ I+S+   + +    +M++     AL  +  L+S 
Sbjct: 394 RSVAMAEKYFGDALPAERKSEPIDDEIISIAKSLKETYDRHMESYAFQNALIDIFKLISR 453

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++Y D   PW L K   N  R +TV+Y  +E +R  AILL  F+P  + KIF
Sbjct: 454 TNKYIDETAPWVLAKDEANRPRLATVIYNLLECVRICAILLTPFMPATSPKIF 506


>gi|227824451|ref|ZP_03989283.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904950|gb|EEH90868.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 644

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/511 (43%), Positives = 313/511 (61%), Gaps = 8/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   +I+T I YP+A  HIGHAY   IAD +AR+ R +G DV F TG+DEHG KI + A+
Sbjct: 3   KPAFFITTPIYYPSANLHIGHAYCSTIADTIARYKRANGFDVRFVTGSDEHGLKIQRKAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +VD    NF+ + ++L ISY DF+R++   H    + + +++ DKGDIYK  
Sbjct: 63  ENGMTPLQYVDGIVANFKKLWEMLGISYTDFVRSSSAEHERVVQEILQRVYDKGDIYKKK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++ D ++ +   G        PV+ MEEE YFFR+S Y D++L + E+H
Sbjct: 123 YVGKYCVPCESFWTDRQIEEA--GGVCPDCGRPVETMEEEDYFFRMSKYADQILKHIENH 180

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE+I+F+K GL+DL +SR TFDWGI +P D + I YVW DAL  Y T  G
Sbjct: 181 PDFIQPVSRRNEMIAFLKQGLEDLCISRSTFDWGIPVPFDKKQITYVWFDALLCYFTGIG 240

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +L N +    +FWP DLH++GK+I+RFH I WPA LLS    LPKKV+ HG+++  G+K+
Sbjct: 241 FLRNEEEFN-RFWPVDLHLVGKEIVRFHTIIWPAMLLSMGYELPKKVYGHGWLVVNGDKM 299

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+E I+E G DA+RYFL+ EIA G DG Y ++GL +R N DLAN +GNL  
Sbjct: 300 SKSKGNVVDPVEPIKEFGPDAVRYFLLSEIALGNDGNYSREGLIRRWNTDLANDLGNLQY 359

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+VSMI K + G++    +    D++  ++    L   R+ M    I+ AL  V S +  
Sbjct: 360 RTVSMIEKYHQGIVHKTASDHADDKAFAALAEETLGSYRKAMDEYQINDALKAVWSYIGA 419

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480
            ++Y D   PW L K     DR   V+Y   + +R +AIL+   +P  A KIF+ L +A 
Sbjct: 420 ANKYIDVTTPWILAKDPAQKDRLEAVMYNLADAVRNIAILISPMMPFTAPKIFEQLGLAV 479

Query: 481 DENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            EN     +       G  + K   PIFPR 
Sbjct: 480 PENFDLNEVKYGGFSDGTKVMKG-QPIFPRI 509


>gi|257870964|ref|ZP_05650617.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805128|gb|EEV33950.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 668

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEELGVDPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGHVIGGKAPSGHEVELVKESSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFI P  R+NE+I+ F+K GL+DL++SR TF WGI +   P++++YVWID
Sbjct: 181 RLVQYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F H
Sbjct: 241 ALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNV+ P  ++E   +DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  +G++P      T  D  + +  + V+    E M       
Sbjct: 361 LANDLGNLLNRTIAMINKYCEGIVPKYASKVTPYDSELSTTAANVVGRYHEAMDKMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           AL++V +L+S  ++Y D  +PW L K    +A   +V+    E +R +AILLQ  + +  
Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKDPEKKAELDSVMVHLAESLRIVAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
             IF  L +  E    + L     P    +     PIFPR 
Sbjct: 481 ANIFHQLGLTSEAMDLKDLRFGEFPSDTKVVAKGTPIFPRL 521


>gi|294101616|ref|YP_003553474.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616596|gb|ADE56750.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 643

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/474 (43%), Positives = 299/474 (63%), Gaps = 5/474 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N  PHIGHAY  I ADV+AR+ R+ G  V F TGTDEHGQKI ++A  
Sbjct: 4   KSFYITTPIYYVNDIPHIGHAYTTIAADVMARYRRMMGDRVFFCTGTDEHGQKIQQSADA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   D+   NFR + +VL+IS DDFIRTTE+RH    + ++KK+ D+GDIYKG Y
Sbjct: 64  KGMTAKELADRTMENFRRLWEVLNISNDDFIRTTEERHEKVVQGIFKKLMDQGDIYKGTY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E Y  +  +    + +       P+Q MEEE YFFR S Y D+LL YYE + 
Sbjct: 124 EGWYCIPCETYVPESSM---KEDKTCPDCGRPLQKMEEESYFFRASKYSDQLLDYYEKNL 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           + I+P  R NE++SFV+SGL+D S+SR +  WGI +P D ++++YVW DAL NYLT  GY
Sbjct: 181 KAIMPRSRYNEIVSFVRSGLRDQSVSRTSIKWGIPVPGDEKHVVYVWFDALINYLTACGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + + +     FWP+  H++GKDI+RFH + WP  L++  L  P  VF+HG+   +GEK+S
Sbjct: 241 MSDSEKLNI-FWPSVHHLVGKDIIRFHCVIWPIMLIALGLNPPVTVFAHGWWTVEGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E+ +  GVD  RYF++RE+  G DG + +  +  R+N+DLAN +GNL++R
Sbjct: 300 KSKGNVVDPFEMADVYGVDPFRYFVLREVPFGLDGDFSEQAMVLRINSDLANDLGNLLNR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M+    DG++P P  F   D+ I ++      ++ E+M       AL  + +L+   
Sbjct: 360 TLQMVKNFRDGIVPAPTNFESLDKEIETLLQSTFSQVEESMSCFAYEEALKAIWALIRRG 419

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++Y D   PW+L K  P +R  TVL+V  E++R   +L+  F+P  A K++  L
Sbjct: 420 NKYIDETMPWKLGKEGPQERLDTVLFVLAEMLRGTGLLIAPFMPLTAEKLWGQL 473


>gi|150014947|ref|YP_001307201.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901412|gb|ABR32245.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 645

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/511 (41%), Positives = 321/511 (62%), Gaps = 10/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKTYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPKQHVDEVVAGIKDLWSMMNISYDKFIRTTDDYHIKAVQDIFKKLYDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y DKL+ Y E H
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADKLIKYIEDH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+++ F++ GL+DL +SR +F+WG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PEFIQPESRKNEMLNNFLRPGLQDLCVSRTSFNWGVPVTFDESHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         K+WPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQENKDLYNKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L++EI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLKEIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K + G +P        D+ ++++      +I E +    I +AL  V  L+ 
Sbjct: 362 SRTVAMVEKYFGGEMPAQDEKEAIDDELINLALSAPAKIEEAINELNIPQALEYVFELIR 421

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K    +A   TVLY   E +R  ++++ AF+P+ + KI + +   
Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLAESLRFASVMISAFLPETSKKINEQINTT 481

Query: 481 DEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +    +S D  +K G  + K  D +FPR 
Sbjct: 482 EISWESLKSFDG-IKAGTKVVKA-DNLFPRI 510


>gi|153956357|ref|YP_001397122.1| methionyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856672|ref|YP_002473794.1| hypothetical protein CKR_3329 [Clostridium kluyveri NBRC 12016]
 gi|146349215|gb|EDK35751.1| MetS [Clostridium kluyveri DSM 555]
 gi|219570396|dbj|BAH08380.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 644

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/475 (43%), Positives = 311/475 (65%), Gaps = 7/475 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+A  HIG+ Y  + AD LARF R+ G DV+  TGTDEHGQKI + A+  GV
Sbjct: 7   YITTPIYYPSANLHIGNTYTTVAADALARFKRITGYDVMLLTGTDEHGQKIQRLAEAKGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K +VD+     +D+  +++I+YD FIRTTEK H    + ++KK+ D+GDIYKG Y GW
Sbjct: 67  PPKEYVDEIVAGIKDLWKIMNINYDKFIRTTEKYHIAAVQKIFKKLYDQGDIYKGNYEGW 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     V+  +EE YFF++S Y   L+ + E+HP+FI
Sbjct: 127 YCTPCESFWTETQL---IDGKCPDCGRT-VEKAKEEAYFFKMSKYAPALIKHIETHPDFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T  GY  
Sbjct: 183 QPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDNKHVIYVWIDALANYITALGYGS 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D    K+WPA++H++GKDILRFH IYWP  L++    +P+KVF HG++L  G K+SKS
Sbjct: 243 EDDKLYKKYWPANVHLVGKDILRFHTIYWPIMLMALGEEIPEKVFGHGWLLVDGGKMSKS 302

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K++N+DLAN +GNL+SR+ 
Sbjct: 303 KGNVVDPVVLVNHFGTDAVRYYLLREIPFGADGLFNNEIFIKKINSDLANDLGNLLSRTC 362

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +MI K +DG++P P    + D+ ++ +   +  +I ++M +  I  AL  +  LVS  ++
Sbjct: 363 TMIEKYFDGIMPAPKEKEDIDDELIGLALDIPIKIEKHMNHLRIPEALDSIWELVSRTNK 422

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           Y D   PW L K  +  DR  TVLY   E +R +++ L AF+P+ + KI+  L V
Sbjct: 423 YIDETTPWILAKDESKKDRLGTVLYNLSESLRIISVCLSAFLPETSEKIYKQLNV 477


>gi|269792806|ref|YP_003317710.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100441|gb|ACZ19428.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 647

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/507 (42%), Positives = 308/507 (60%), Gaps = 16/507 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I Y N  PHIGHAY  I ADVLAR +R+ G D  F TGTDEHGQKI +
Sbjct: 1   MSESSAFYITTPIYYVNDVPHIGHAYTTIAADVLARHNRMIGRDTFFLTGTDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+T +   DQ   NF+ +  VL+I+ DDFIRTTE+RH    + ++ K+ +KGDIY
Sbjct: 61  AASAKGLTAQQLADQTVENFKRLWKVLNITNDDFIRTTEERHERVVQHIFSKLLEKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY +  E Y  + ++    +G        P+Q M EE YFFR+S YQD+LL YY
Sbjct: 121 LGSYEGWYCVPCETYVPEAQM---GEGNTCPDCKRPLQKMTEESYFFRMSKYQDRLLEYY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ESHPE ILP  R NE++SF+K GLKD S+SR T  WG+ +P D ++++YVW DAL NYL+
Sbjct: 178 ESHPEAILPKSRYNEIVSFIKGGLKDQSISRTTLTWGVPVPGDSRHVVYVWFDALINYLS 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D   G   KFWP   H++GKDI+RFH++ WPA L++ +L  PK VF+HG+    G
Sbjct: 238 ALGYPDE-GGKWRKFWPVCHHLVGKDIIRFHSVVWPALLMALDLEPPKMVFAHGWWTVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+DP E+ E  G D  RYFL+RE+  G DG + + GL +R+N+DLAN +GN
Sbjct: 297 DKMSKSKGNVVDPFEMAELYGPDPFRYFLLREVPFGLDGDFSERGLVQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R++ M+ K   G++P+    T+ + SI ++   V  ++   ++      AL  + S 
Sbjct: 357 LLNRTLQMMTKYRGGVVPSRVCPTKLESSIRAMGEDVTAQVDSLLERFAFDEALKAIWSF 416

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y D   PW+L  +   +    VL    E ++  A L+  F+P  A +I+  L  
Sbjct: 417 IGRANKYIDETMPWKLGNEGRGEELDRVLRTLFEALKLSAQLVYPFMPDAAARIWSQL-- 474

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPI 506
                    LD ++  G  +  +FDPI
Sbjct: 475 --------GLDGQVGEG-RIRWSFDPI 492


>gi|197302731|ref|ZP_03167785.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
           29176]
 gi|197298313|gb|EDY32859.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
           29176]
          Length = 677

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/482 (43%), Positives = 316/482 (65%), Gaps = 9/482 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 46  MSEKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 105

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD+ S   + + D++D SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 106 KAEEAGITPKEFVDKVSGEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +    PVQ  +EE YFF++S Y D+L+ + 
Sbjct: 166 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFKMSKYADRLIEHI 221

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 222 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 281

Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY    + ++   K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 282 TGIGYDAEGNSTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 341

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 342 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 401

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +   G   E D  + +V     + + E M++  +  A+ ++
Sbjct: 402 LGNLVNRTISMTNKYFGGTVTDTGVAEEVDADLKAVVENTAKAVAEKMKDLRVADAITEI 461

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K  +  DR STVL+  ++ I + A LL+ ++P  + KI +
Sbjct: 462 FNLFKRCNKYIDETTPWVLGKDESKKDRLSTVLWNLIQGISEGARLLEPYMPSTSKKILE 521

Query: 476 IL 477
            L
Sbjct: 522 QL 523


>gi|251779970|ref|ZP_04822890.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084285|gb|EES50175.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 645

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/473 (43%), Positives = 305/473 (64%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  ++++SYD FIRTT++ H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDEYHVKAVQDIFKKLHDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++ F++ GL+DL +SR +FDWG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+MI K +DG I       E DE ++++      +++E +    I  AL  V  L+ 
Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAYPNKVQEAIDELNIPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K    +A   TVLY  +E +R  ++++ +F+P  A KI
Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLIESLRFASVMISSFLPDTAKKI 474


>gi|288574650|ref|ZP_06393007.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570391|gb|EFC91948.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 646

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/483 (42%), Positives = 305/483 (63%), Gaps = 6/483 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  YI+T I Y N  PHIGHAY  I ADV++R+ R+DG  V F TGTDEHGQKI +
Sbjct: 1   MSDSKHFYITTPIYYVNDVPHIGHAYTTIGADVMSRYKRMDGYKVFFLTGTDEHGQKIYE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G+T +   D+ + NF+ +  VL+IS DDFIRTTEKRH    + ++ K+ D+GDIY
Sbjct: 61  SAKAKGMTAQELTDEMAENFKRLLPVLNISNDDFIRTTEKRHERVVQSIFSKLMDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E Y  +  +    +         P+  MEEE YFF+ S Y D+LL YY
Sbjct: 121 KGTYKGLYCVPCETYVPESSM---GENNTCPDCGRPLVEMEEESYFFKTSRYADRLLKYY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+ I+P  R NE++SF+KSGL+D S+SR +  WGI +P D ++++YVW DAL NYLT
Sbjct: 178 EDNPKAIMPKTRYNEIVSFIKSGLRDQSVSRTSISWGIPVPGDEKHVIYVWFDALINYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D+P+   A FWP   H++ KDI+RFH + WP  +++  L  P  VFSHG+   +G
Sbjct: 238 ACGYEDDPE-KLAAFWPNAHHLMAKDIIRFHCVIWPIMVMALGLNPPVGVFSHGWWTMEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DP E+++  G DA RYFL+R++  G DG + +  + +R+N+DLAN +GN
Sbjct: 297 EKMSKSKGNVVDPFEMVDLYGADAFRYFLLRQVPFGMDGDFSEAAMAQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSM+LK  DG++P+P   +  D  +  V  + L   RE M +     AL     L
Sbjct: 357 LLSRTVSMVLKYRDGIVPSPSDLSPLDIELSEVARKALDTYREKMDDFTFDEALKAAWGL 416

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-F 478
           +   ++Y D   PW+L  + + +    VL+  VE ++ +++++  F+P+  ++++  L F
Sbjct: 417 IGRANKYIDETMPWKLGNEGSKEPLDAVLWGLVESLKLVSMMISPFMPETGHRVWSQLGF 476

Query: 479 VAD 481
             D
Sbjct: 477 CGD 479


>gi|329770195|ref|ZP_08261585.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837001|gb|EGF86645.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 666

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/524 (40%), Positives = 319/524 (60%), Gaps = 21/524 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGHAY  +  D L R+ +L G D  F TGTDEHGQKI + AQ
Sbjct: 3   KKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYDTFFLTGTDEHGQKIQQKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + +VD   ++ + +   +DI Y  FIRTT+  H      +++++ +KGDIY G 
Sbjct: 63  EKGISEQAYVDDMIKDIKKLWKAMDIDYSKFIRTTDDYHERAVAEIFERLVEKGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE Y+ +    EV++  +G          N V+ + EE YFF++S Y D+L+
Sbjct: 123 YQGWYSISDEEYFTETQLQEVFRDEEGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFILP  R+NE+++ F+K GL+DL+++R TFDWG+K+  +P++++YVWIDAL 
Sbjct: 183 KYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY+T  GY          K+WPAD+ V+GK+I+RFH IYWP  L++ +LPLPKKVF+HG+
Sbjct: 243 NYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKVFAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GNV+DP  +IE  G+DA RY+L+RE+  G+DG +  +    R+N+DL+
Sbjct: 303 LLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLREVPFGQDGIFTPESFIDRINSDLS 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R++SM+ K   G+IP      TE D+ ++ +   V+ E  E M+N    +AL
Sbjct: 363 NDLGNLLNRTISMVNKYCGGVIPKFVEPTTEFDKELIDLSKEVIAEYEEYMENMQFSKAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V   +S  ++Y D   PW L K   N      V+    E +R   IL+   +     +
Sbjct: 423 ESVWKFISRTNKYIDQTTPWILAKDEANKPELDKVMNYLAESLRITTILISPALTNAPKE 482

Query: 473 IFDILFVADE------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +++E       + F   D  +K   ++ K   PIFPRF
Sbjct: 483 IAKQLGISEELLTFEIAKTFGVFDGTVK---VVEKP-TPIFPRF 522


>gi|46204985|ref|ZP_00049208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 348

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/317 (60%), Positives = 239/317 (75%), Gaps = 2/317 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD +YD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  AARAGVTPRAFVDDMAGRFKAVADRLDCAYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + + + PV+WMEEE + FRLS YQD+LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETVLGPDGNRRSIKTDTPVEWMEEENFLFRLSKYQDRLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 EEQPGFLAPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D  D   A+FWPA LHVIGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAAD-PNARFWPASLHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVI 317
           EK+SKSLGNV+DP++++
Sbjct: 305 EKMSKSLGNVVDPLDLV 321


>gi|188588457|ref|YP_001919550.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498738|gb|ACD51874.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 645

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/473 (43%), Positives = 304/473 (64%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  ++++SYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++ F++ GL+DL +SR +FDWG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKDLYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+MI K +DG I       E DE ++++      +++E +    I  AL  V  L+ 
Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAAPNKVQEAIDELNIPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K    +A   TVLY  +E +R  ++++ +F+P  A KI
Sbjct: 422 RANKYIDETTPWILAKDENKKARLGTVLYNLIESLRFASVMISSFLPDTAKKI 474


>gi|291551306|emb|CBL27568.1| methionyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 633

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/484 (43%), Positives = 315/484 (65%), Gaps = 13/484 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MSEKPKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEEAGITPKEFVDNVSTEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +    PVQ  +EE YFF++S Y D+L+ + 
Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H +
Sbjct: 237 TGIGY--DADGNSTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLA
Sbjct: 295 LLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R+VSM  K + G +   G   + D  + +V     + +   M +  +  A+ 
Sbjct: 355 NTLGNLVNRTVSMTNKYFGGTVEDKGVVEDVDAELKAVVENASKAVDAKMADLRVADAIT 414

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ +L    ++Y D   PW L K  +  DR STVL+  ++ I + A LL++F+P  + KI
Sbjct: 415 EIFNLFKRCNKYIDETTPWVLGKDESKKDRLSTVLWNLIQSISEGARLLESFMPSTSKKI 474

Query: 474 FDIL 477
            + L
Sbjct: 475 LEQL 478


>gi|225376548|ref|ZP_03753769.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM
           16841]
 gi|225211585|gb|EEG93939.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM
           16841]
          Length = 665

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/483 (43%), Positives = 316/483 (65%), Gaps = 12/483 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI +
Sbjct: 1   MSNKGKYYMTTAIAYTSGKPHIGNTYEIVLADAIARYKRAEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD  +   + + D+++ SYD+F+RTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAEAAGITPKEFVDGVAGEVKAIWDLMNTSYDNFVRTTDADHEKCVKKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +     V+  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KGAYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VKPAKEEAYFFKMSKYADRLIDYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           T  GY  +PDGS   F   WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++
Sbjct: 237 TKIGY--DPDGSSELFQKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLPKQVFGHPWL 294

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G+K+SKS GNVI   +++   GVDA RYF++ E+    DG    + + +R N+DLAN
Sbjct: 295 LQGGDKMSKSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGVITWELVIERFNSDLAN 354

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNLV+R++SM  K +DG++   GA  E DE + +V +    +++E M    +  A+  
Sbjct: 355 ILGNLVNRTISMSNKYFDGVVRKTGAAEEVDEDLKAVVTGTRDKVQEKMDKLRVADAITA 414

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  L    ++Y D   PW L K   + DR + VLY   E I   A LL +F+P+ A KI 
Sbjct: 415 VFDLFRRCNKYIDETTPWVLAKDEADHDRLAEVLYNLTESITIGAGLLHSFLPETAEKIV 474

Query: 475 DIL 477
           + L
Sbjct: 475 NQL 477


>gi|160902697|ref|YP_001568278.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360341|gb|ABX31955.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 645

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/508 (40%), Positives = 324/508 (63%), Gaps = 3/508 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N++PHIG AY  I+AD++ARF R+ G DV F TGTDEHGQK+ +AA+ 
Sbjct: 2   DKFYVTTPIYYVNSEPHIGSAYTTIVADIVARFKRMMGYDVFFLTGTDEHGQKVLQAAKE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + +VD  S  F+++ D + ISYD F+RTT+  H  T ++   K+ + GD+YKG Y
Sbjct: 62  KNIPPQEYVDSLSSKFKNLWDEMGISYDHFVRTTDAYHVKTVQMFVDKMMENGDVYKGKY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY + DE+++++ E+      +     +  ++W+EEE YFF+LS Y + LL +YE++P
Sbjct: 122 AGWYCIHDESFWDESEIVTQDGVKLCPECNRELKWVEEENYFFKLSKYTEPLLKHYENNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++  +  GLKDLS++R TFDWGI +  DP++++YVW+DAL NY++  GY
Sbjct: 182 DFVEPSFRRNEMLQILNDGLKDLSITRTTFDWGIPLKSDPKHVVYVWVDALINYVSAIGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+      ++WPADLH+IGK+I RFH++ WPA L+S  LPLPKKVF+HG++   G+KIS
Sbjct: 242 SDDQQKFN-RYWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKVFAHGWLTVNGQKIS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN +DP  +++  G D +RY+L+R+IA G+DG + ++ L  R NADL N + NLV R
Sbjct: 301 KSLGNAVDPRILMDAYGRDVIRYYLLRDIAFGRDGDFSEENLITRYNADLVNDLSNLVHR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +++M+ K ++G+IP P    + DE +L +           M+     +AL  +  ++   
Sbjct: 361 TLTMVEKYFNGVIPKPERKDKVDEELLELLESKKNAYLNLMERYQFTQALENLWEVIRFS 420

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L       DR STVLY  ++VIR ++IL+   +P  +  +   +    E
Sbjct: 421 NKYIDLTEPWILGNDPNEKDRLSTVLYNLLDVIRIISILIYPIMPDTSETMLKKIGYGLE 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++L++ L    +     DPIF R 
Sbjct: 481 ILNRENLEKGLLHSGVKVVKGDPIFQRI 508


>gi|187934680|ref|YP_001884366.1| methionyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187722833|gb|ACD24054.1| methionine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 645

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/473 (43%), Positives = 304/473 (64%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G +V+F TGTDEHGQKI + A+
Sbjct: 6   KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYEVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  ++++SYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGNCPDC----GRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++ F++ GL+DL +SR +FDWG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDESHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+MI K +DG I       E DE ++++      +++E +    I  AL  V  L+ 
Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAAPNKVQEAIDELNIPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K    +A   TVLY  +E +R  ++++ +F+P  A KI
Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLIESLRFASVMISSFLPDTAKKI 474


>gi|328954955|ref|YP_004372288.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455279|gb|AEB06473.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 542

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/493 (45%), Positives = 303/493 (61%), Gaps = 26/493 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y NA+PH+G AY  ++ADV+ARF R  G DV F TG DEHG+K+++AA   
Sbjct: 7   SFYITTPIYYVNARPHLGTAYATMLADVMARFKRASGADVKFLTGMDEHGEKVSEAAIAH 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT + + D     FRDM   L+IS DDFIRTTE+RH    + L + + D+G IYK  Y 
Sbjct: 67  GVTPQRWCDCMEPAFRDMWAALEISNDDFIRTTEQRHVRGVQKLLQILRDRGFIYKDAYD 126

Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQ--------YYNAQHNPVQWMEEEGYFFRLSAY 172
           GWY + DE Y+ + +V        ADG                P+Q +EEE +FF+LS +
Sbjct: 127 GWYCVPDETYFTETQVRHHQEALSADGACECDPAAPMCPDCDRPLQRIEEESWFFKLSEF 186

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           Q  LL  YE+HPEFI P  RRNEVISFV+ GLKDLS+SR TFDWG+ +P DP+++ YVW+
Sbjct: 187 QQPLLDLYEAHPEFIQPETRRNEVISFVRGGLKDLSISRSTFDWGVPLPFDPEHVAYVWV 246

Query: 233 DALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           DAL NYLT  GY    D   A+    WPA +HV+GKDI+RFH + WPA L++A LPLP++
Sbjct: 247 DALINYLTAVGYGRGGDEEAAELAYRWPAQMHVVGKDIIRFHCVIWPALLMAAGLPLPER 306

Query: 290 VFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           VF HGF+  +       EK+SKS GN I P EVIE +GVDA RY+ + ++A G D     
Sbjct: 307 VFVHGFLTVRNEQTGGAEKMSKSRGNAISPEEVIELLGVDAYRYYFMGDVAHGTDAPISW 366

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +++  NADLAN  GNLVSR++SM  K + G  P      E+  ++   C  + +    
Sbjct: 367 GRMRQVYNADLANSWGNLVSRALSMSAKYFAGGSPARPQDFEAPSALKDACEGIYERYAS 426

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460
           +M+     RAL +V+++VS  +RY +   PW L  T+P RA   S V++  +EVIR  A 
Sbjct: 427 HMEEVEYGRALGEVLAVVSAANRYIEDTAPWAL-ATDPARAAELSHVIWSLLEVIRIAAA 485

Query: 461 LLQAFVPKLANKI 473
           L   F+P ++ ++
Sbjct: 486 LYDPFMPAISAEV 498


>gi|332178180|gb|AEE13869.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 508

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/510 (43%), Positives = 316/510 (61%), Gaps = 12/510 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N +PHIGHAY  +  DVLARF RL G DV F TGTDEHG+KI KAA+N
Sbjct: 3   KSFYITTPIYYVNDKPHIGHAYTTVACDVLARFRRLQGKDVFFLTGTDEHGRKIQKAAEN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                K +VD+ ++ F+D    L+IS DDFIRTT++RH+      W+ ++D GDIYKG Y
Sbjct: 63  NSSDAKSYVDRFAKIFQDAWLALNISNDDFIRTTQERHYKAVAKFWQIVNDNGDIYKGKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWY +  E +++D+++    DG+  +     V+WMEEE YFFRLS Y   LL  Y    
Sbjct: 123 SGWYCVPCETFFSDEQL---VDGKCPDCGRE-VEWMEEESYFFRLSKYTQPLLELYNDKK 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F++P  RRNEVI FV  GLKDLS+SR  F WGIK+PDDP +++YVW DAL NYLT  G+
Sbjct: 179 NFVMPDFRRNEVIQFVSQGLKDLSISRSKFSWGIKVPDDPGHVIYVWFDALLNYLTAAGF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++ +  K + WPAD+HV+GK+I+RFHA+ WPA L+SA LPLPK VF HG+   +GEK+S
Sbjct: 239 AEDEEKFK-RIWPADVHVVGKEIVRFHAVIWPAMLMSAKLPLPKMVFGHGWWTMEGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+D   + ++VGVD +RYFL++ +  G+DG +   GLK+ +NADLAN  GNL++R
Sbjct: 298 KSKGNVVDIWALSKDVGVDPMRYFLMKAVPFGQDGDFSYKGLKEILNADLANDFGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL---SVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + SM L+ Y+    T      + ES +   ++   + + I ++  N      L ++++L+
Sbjct: 358 TASM-LERYNNSSLTEADKLFNKESFVKLRAIFDGMKERIEKHYDNLSFSFVLEEIMTLI 416

Query: 422 SEVDRYFDAQKPW-ELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              +++ D   PW   K+   D   ++  Y   EV+R  +I L  F+P ++  +   L +
Sbjct: 417 KGANKFLDETAPWRSFKEKGFDLEVASTFYHVFEVVRLSSIALYPFMPTISKDVLRRLSI 476

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             E   +      L P     +  +PIF R
Sbjct: 477 YGEP-SWSEFSWGLLPMPCKIEKGEPIFKR 505


>gi|307243786|ref|ZP_07525918.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492840|gb|EFM64861.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 646

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/483 (42%), Positives = 312/483 (64%), Gaps = 7/483 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIGHAY  I AD +ARF R  G DV F TGTDEHG+KI K
Sbjct: 1   MTSKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG +   F+D+     + + + L+IS DDFIRTTE+RH    + ++ K+ +KG+IY
Sbjct: 61  KAHEAGKSEIEFLDEQIAEIKKLWEKLEISNDDFIRTTEERHEKAIQKIFTKLYEKGEIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E+++ + ++ +G        +   V+   EE YFFRLS YQD+L+  +
Sbjct: 121 KGSYEGHYCVPCESFWTESQMLEGNKCPDCGRETKVVK---EESYFFRLSKYQDRLMDLF 177

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + + +F++P  R+NE+I +F++ GL+DLS++R +FDWGIK+P D ++I+YVW+DAL NY+
Sbjct: 178 Q-NTDFVMPESRKNEMIKNFLEPGLEDLSVTRTSFDWGIKVPFDEKHIIYVWVDALCNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + D +  KFWPAD+H++ K+I+RFH I WPA L++ ++P+PK+VF HG+IL  
Sbjct: 237 TALGYEGDDDTNYKKFWPADVHLVAKEIVRFHTIIWPALLMALDIPVPKRVFGHGWILFA 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P ++++  GVDAL+YFL+RE + G+DG Y       R+N+DLAN +G
Sbjct: 297 DDKMSKSKGNIVYPGQMVDRYGVDALKYFLLREFSFGQDGSYTHRNFINRINSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR++SM+ K  +G++    A TE D+ ++     V  +    M   + H AL  +  
Sbjct: 357 NLVSRTISMVEKYNEGVLVVNDAGTEFDQDLIDTYREVRADFEGQMNELMFHEALESLWK 416

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V   ++Y D   PW L K   N D+ + VLY   E IR ++ L+ + +P+ A KIFD L
Sbjct: 417 FVRRTNKYIDETMPWVLAKDEANKDQLNHVLYNLCESIRLISTLISSLLPETARKIFDQL 476

Query: 478 FVA 480
            +A
Sbjct: 477 GIA 479


>gi|284048773|ref|YP_003399112.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952994|gb|ADB47797.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 650

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/509 (41%), Positives = 311/509 (61%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+A  HIGHAY   IAD +AR+ R +G DV F TG+DEHG KI + A+
Sbjct: 3   KPAFYITTPIYYPSADLHIGHAYCTTIADTIARYKRANGFDVQFITGSDEHGLKIQRKAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + GV    + D+   +F+ + ++L +SY  F+RT+   H  T + L +K+ ++GDIYK  
Sbjct: 63  SFGVKPIEYTDKIVADFKKLWEMLGVSYTSFVRTSSPEHEKTVQTLLQKVWEQGDIYKKD 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++ + +V +   G        PV+ M E  YFFR+S Y D++L Y E+H
Sbjct: 123 YEGLYCVPCESFWTEHQVEEA--GGVCPDCGRPVEKMRESSYFFRMSKYADRILEYIETH 180

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI++P DP++++YVW DAL  Y T  G
Sbjct: 181 PDFIQPVSRRNEMINFIKQGLEDLCISRSSFDWGIQVPFDPKHVVYVWFDALLAYFTGIG 240

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +  + D    +FWPADLH++GK+I+RFH I WPA L++    LPK+V+ HG+++  G+K+
Sbjct: 241 FGRDMDKFN-RFWPADLHLVGKEIVRFHTIIWPAMLMAMGFDLPKEVYGHGWLVVDGDKM 299

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP++ I+E G DA+RYFL+REI  G DG Y + GL KR N+DLAN +GNL  
Sbjct: 300 SKSKGNVVDPVQPIQEFGADAVRYFLLREINLGSDGNYSRKGLIKRFNSDLANDLGNLQY 359

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+VSMI K + G++      +E+DE   S+ +  LQ  R  M    ++  +  + + V  
Sbjct: 360 RTVSMIDKYHGGIVHKTVVESETDEKFRSLAAETLQNYRAAMDKYALNDGIKAIWAYVGA 419

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVA 480
            ++Y D   PW L K      R   V+Y   + +R +AIL+ + +P  A KIF+ L    
Sbjct: 420 ANKYIDETTPWILAKDPAQAKRLEAVMYNLADAVRNIAILISSMMPFTAPKIFEQLGLTV 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            E      +     P         PIFPR
Sbjct: 480 PEQFNLNDVAWGNFPDGTKVAKGQPIFPR 508


>gi|163782331|ref|ZP_02177329.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882364|gb|EDP75870.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 493

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/487 (44%), Positives = 303/487 (62%), Gaps = 19/487 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N  PHIGHAY  I AD +ARF+RL G DV F TGTDEHG KI K+A+ 
Sbjct: 2   KKFYVTTPIYYVNDVPHIGHAYTTIAADTVARFYRLRGYDVFFLTGTDEHGLKIQKSAEE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+NS NF+ + + L I Y  FIRTT+  H +  + ++ K  + GDIY G Y
Sbjct: 62  RGVSPKELADRNSENFKRLWEFLGIEYTKFIRTTDPEHVELVKEVFTKSYENGDIYLGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E + ++ E+   A+G        P +++ E  YFFRLS YQDKLL  YE HP
Sbjct: 122 EGWYCVGCEEFKSEMEL---AEGNSCPIHMKPCEYIREPSYFFRLSKYQDKLLELYEEHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EF+ P  RRNE+ISFVK GLKDLS++R      WGI +P D  + +YVW DAL NY++  
Sbjct: 179 EFVRPDYRRNEIISFVKQGLKDLSVTRPRSRVRWGIPVPFDEGHTIYVWFDALFNYISAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                 +G   ++WPADLH++GKDILRFH +YWPAFL S    +P+ VF+HG+   +G+K
Sbjct: 239 ------NGQVDRYWPADLHIVGKDILRFHTVYWPAFLFSVGYEVPETVFAHGWWTVEGKK 292

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVI P EV+EE G+D +RYFL+RE+  G+DG + K+ +  R+N +LAN IGNL 
Sbjct: 293 MSKSLGNVISPYEVVEEYGLDEVRYFLLREVPFGQDGDFSKEAILNRINGELANEIGNLF 352

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR VSM  K   G +   G     D++   +   V++     M+    +RAL +V+ L S
Sbjct: 353 SRVVSMSKKYLGGKVEGRG-----DDAYRELAGDVVERYEGYMREVNFYRALEEVLRLSS 407

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP---KLANKIFDILFV 479
            +++Y D + PWEL K   +    VLY  V+ +  LA LL  F+P   KLA ++  +  +
Sbjct: 408 FLNKYVDEKAPWELAKRGDENLRDVLYTLVDGLFLLAYLLTPFMPNKMKLAMEMLGVERM 467

Query: 480 ADENRCF 486
            +E + F
Sbjct: 468 PEEVKPF 474


>gi|291547427|emb|CBL20535.1| methionyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 659

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/496 (44%), Positives = 321/496 (64%), Gaps = 15/496 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+++ YISTAIAY + +PHIG+ YE+++AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 2   EKQRYYISTAIAYTSGKPHIGNTYEVVLADAIARFKRQQGYDVYFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD  S   + + D+++ SYD FIRTT+K H +  + ++KK+  KGDIYKG
Sbjct: 62  EEAGVTPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDKDHEEQVKKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    P    +EE YFF++S Y DKL+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADKLIDYINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG+ +    K+WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L
Sbjct: 238 IGY--DCDGNSSDKFNKYWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLL 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   E++E  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 296 QGDGKMSKSKGNVIYADELVEFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K ++G++         DE + S   +V + +   M    +  A+ +V
Sbjct: 356 LGNLVNRTISMSNKYFNGVVENKNVIEPVDEDLKSFILQVPKNVSAKMDKLRVADAITEV 415

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            SL    ++Y D   PW L K  T  DR +TVLY  VE I   A LL++F+P+   +I  
Sbjct: 416 FSLFKRCNKYIDETMPWALAKDETKQDRLATVLYNLVEGICIGASLLKSFMPRTTERIL- 474

Query: 476 ILFVADENRCFQSLDQ 491
           +   A+E R  + ++Q
Sbjct: 475 VQLNANE-RTLEEMEQ 489


>gi|282857419|ref|ZP_06266652.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282584704|gb|EFB90039.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 651

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/474 (44%), Positives = 292/474 (61%), Gaps = 10/474 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N  PHIGHAY  I AD +AR+ R+DG DV F TGTDEHGQK++++A  
Sbjct: 4   KSFYITTPIYYVNDVPHIGHAYTTIAADAMARYKRMDGCDVFFLTGTDEHGQKVSESAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ ++NFRD+  ++D S DDFIRTTE RH    + ++KK+ D+GDIYKG Y
Sbjct: 64  KGMTPQQLTDELAQNFRDLLPLIDASNDDFIRTTEARHVKVVQQIFKKLLDQGDIYKGTY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ--HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            GWY +  E Y     V + + G+ +     H P++ MEEE YF R SAY D+LL +YE+
Sbjct: 124 KGWYCVPCETY-----VPEASQGENHTCPDCHRPLKEMEEESYFLRTSAYADRLLEFYEA 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+ I P  R NEV+SF++ G+KD S+SR +  WGI +P D ++ +YVW DAL NYLT  
Sbjct: 179 HPDAIKPKVRYNEVVSFLRMGMKDQSISRTSVPWGIPVPGDEKHTVYVWFDALINYLTAC 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + +    KFWP   H++GKDI+RFH I WP  LL+  L  P  V+SHG+    GEK
Sbjct: 239 GYGSD-EAKMKKFWPVVNHLVGKDIIRFHCIVWPIMLLALGLTPPACVYSHGWWTRDGEK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP E++   G D  RYFL+R++  G DG + +  L +RVN+DLAN +GNL+
Sbjct: 298 MSKSKGNVVDPHEMVGLYGSDVFRYFLLRQVTFGFDGDFSELALVQRVNSDLANDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+MI K   G +P P A    D  +         E R  M N     AL  + S++ 
Sbjct: 358 SRTVTMIEKYRGGAVPAPAALESLDVEVKEQALNAFAEYRAFMDNYQFDDALKALWSMIG 417

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             ++Y D   PW+L K      R  TVL    E ++  A++L   +PK A KI+
Sbjct: 418 RANKYIDETMPWKLGKDESLAARLDTVLATLAEELKLAALMLAPVMPKTAVKIW 471


>gi|300214134|gb|ADJ78550.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Lactobacillus salivarius CECT 5713]
          Length = 675

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 323/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP      T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|227891852|ref|ZP_04009657.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius ATCC 11741]
 gi|227866315|gb|EEJ73736.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius ATCC 11741]
          Length = 675

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 323/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP      T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|301299606|ref|ZP_07205867.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852793|gb|EFK80416.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 675

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 323/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALYNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP      T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILTKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|22537699|ref|NP_688550.1| methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25011651|ref|NP_736046.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76788328|ref|YP_330181.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77413421|ref|ZP_00789613.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|22534588|gb|AAN00423.1|AE014263_2 methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413191|emb|CAD47270.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76563385|gb|ABA45969.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77160515|gb|EAO71634.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 665

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/520 (40%), Positives = 329/520 (63%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S+  KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGATFDLEKLTFADLPEGVRVVAKGSPIFPRL 520


>gi|303229591|ref|ZP_07316379.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515716|gb|EFL57670.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 649

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/514 (41%), Positives = 314/514 (61%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTFYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDFIRTT+ RH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDARHEKVVQELFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    +         PV+ ++EE YFF+L  Y D+ L + E +
Sbjct: 125 YEGWYCTPCESFWTEQKL---GENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       KFWPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDP  +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPNPLIDTYGADSLRYYLLSEITLGHDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D+ I S+  + + +    M+   +++AL  V + +S 
Sbjct: 362 RTIAMIEKYHGGIITKTNDVDDLDKEISSLAEQTVADFEAQMEAMELNKALKTVWAFISR 421

Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K++ +    R  +V+Y   E +R +A+L+   +P  A KI+D L +
Sbjct: 422 MNKYIDETMPWVLAKSSDETDVRRLQSVMYHLAESLRIIAVLVSPVIPVGAPKIWDQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510
                  Q  D R   G          +PI+PRF
Sbjct: 482 GGFEHV-QLDDVRTWGGIQTGTKVVKGEPIYPRF 514


>gi|317495634|ref|ZP_07954001.1| methionyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914253|gb|EFV35732.1| methionyl-tRNA synthetase [Gemella moribillum M424]
          Length = 665

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/527 (40%), Positives = 316/527 (59%), Gaps = 27/527 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGHAY  +  D L R+ +L G D  F TGTDEHGQKI + AQ
Sbjct: 3   KKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGFDTYFLTGTDEHGQKIQQKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ + +VD   ++ + +   +DI Y  FIRTT+  H      +++++ +KGDIY G 
Sbjct: 63  EKGVSEQQYVDDMIKDIKKLWSAMDIDYSKFIRTTDGYHERAVAEIFERLVEKGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE Y+ +    EV++  DG          N V+ + EE YFF++S Y D+L+
Sbjct: 123 YKGWYSISDEEYFTETQLQEVFRDEDGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFILP  R+NE+++ F+K GL+DL+++R TFDWG+K+  +P++++YVWIDAL 
Sbjct: 183 KYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY+T  GY          K+WPAD+ V+GK+I+RFH IYWP  L++ +LPLPKK+F+HG+
Sbjct: 243 NYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKIFAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GNV+DP  +IE  G+DA RY+L+RE+  G+DG +  +    R+N+DL+
Sbjct: 303 LLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLREVPFGQDGIFTPESFIDRINSDLS 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R++SMI K  +G+IP      TE D  ++ +   V+ E    M+N    +AL
Sbjct: 363 NDLGNLLNRTISMINKYCNGVIPKFVEPTTEFDTELIELSKEVIDEYDGYMENMQFSKAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V   +S  ++Y D   PW L K    +     V+    E +R   IL+    P L N 
Sbjct: 423 ESVWKFISRTNKYIDQTTPWILAKDEASKGELDKVMNYLAESLRIATILIS---PALTNA 479

Query: 473 ---------IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                    + D L   +  + F   D   K   ++ K   PIFPRF
Sbjct: 480 PKEIKVQLGLSDDLLTFETAKTFGVFDGTTK---VVEKP-TPIFPRF 522


>gi|283768674|ref|ZP_06341586.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
 gi|283105066|gb|EFC06438.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
          Length = 647

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/495 (42%), Positives = 312/495 (63%), Gaps = 10/495 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+TAIAY + +PHIG+ YE+++AD +AR+ +++G DV F TGTDEHGQK+ +
Sbjct: 1   MSEKKPYYITTAIAYTSGKPHIGNVYEIVLADAIARYKKMEGYDVRFQTGTDEHGQKVEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G T K FVD+ +   +   DV+++ YD FIRTT+  H    + +++K  D+GDIY
Sbjct: 61  KAQEQGKTPKAFVDEMATIVKKQFDVMNVQYDRFIRTTDADHEKQVQKIFRKFYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y   DEA++   ++ +         +  P   M+EE YFFR+S Y D+L+ Y 
Sbjct: 121 KGEYEGMYCEEDEAFFTTSQLTEEGCCPVCGGKVKP---MKEETYFFRMSKYADRLMKYI 177

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HP+FI P  R+NE+++ F+K GL+DLS+SR +F WGI +  DP++++YVWIDAL+NY+
Sbjct: 178 EDHPDFIQPESRKNEIVNNFLKPGLQDLSVSRTSFKWGIPVDFDPKHVIYVWIDALSNYI 237

Query: 240 TTTGYL--DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY    N D    K+WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H +++
Sbjct: 238 TGLGYEVDGNHDPLFKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPKQVFGHPWLM 297

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSLGNVI   +++   GVDA+RY  + E+   +DG    D + +R+N+DLAN 
Sbjct: 298 VGESKMSKSLGNVIYADDMVHVFGVDAMRYIFLHEMPFAQDGHITYDLMMERINSDLANN 357

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K ++G++  P      D          + +++  M+   +  A+  +
Sbjct: 358 MGNLVNRTISMQNKYFNGIVANPHVDETLDTEFKRTILGKVTDVKAQMEELRVQDAIGTI 417

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + L S  ++Y D   PW L K +    R +TVLY  +E IR   ILL+ F+P+ + KI  
Sbjct: 418 LELFSRCNKYIDETMPWSLAKDSDQIGRLATVLYNLLEAIRIGGILLRPFLPETSAKILA 477

Query: 476 ILFVADENRCFQSLD 490
            L    +   F+S D
Sbjct: 478 NL--NTQQTSFESCD 490


>gi|291520365|emb|CBK75586.1| methionyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 657

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/484 (44%), Positives = 311/484 (64%), Gaps = 14/484 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI  
Sbjct: 1   MGNKGNYYITTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG+T K FVD  S   + + D+++ SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAAEAGITPKEFVDNVSGQVKSIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y DKL+ Y 
Sbjct: 121 KSSYEGLYCTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADKLIDYI 176

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE++ +F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + + S      WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 237 TGIGYECDGESSDQFKALWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296

Query: 298 HKG-----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
            K      +K+SKS GNVI   E+++  GVDA+RYF++ E+    DG      + +RVN+
Sbjct: 297 TKSADGGDDKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGAISWPLMVERVNS 356

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           DLAN +GNLV+R++SM  K + G++   G   E D  + +VC+  +  + + M +  +  
Sbjct: 357 DLANTLGNLVNRTISMSNKYFGGVVEDKGVAEEVDADLKAVCTGTVTAVEKKMADLRVAD 416

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V +L    ++Y D   PW L K     DR +TVLY  VE I   A LL+AF+P+ +
Sbjct: 417 AITEVFNLFKRCNKYIDETMPWALAKDEAKKDRLATVLYNLVEGISIGATLLKAFMPETS 476

Query: 471 NKIF 474
            KI 
Sbjct: 477 EKIL 480


>gi|77411392|ref|ZP_00787739.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162565|gb|EAO73529.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 665

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/520 (40%), Positives = 327/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S+  KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+   V+      +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLEAVMSHLAASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 520


>gi|94969057|ref|YP_591105.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551107|gb|ABF41031.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 671

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/485 (43%), Positives = 304/485 (62%), Gaps = 12/485 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K YI+T I Y NA+PHIGH Y  +  D +AR  R+ G+D  F TGTDEHGQKI ++A 
Sbjct: 3   KDKFYITTPIYYVNARPHIGHTYTTVACDAIARRKRMLGVDTFFLTGTDEHGQKIERSAM 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G + + FVD+ S  FR + D + +SYD FIRTT+  H    + L K++ D+G IYKG 
Sbjct: 63  ASGKSDQQFVDEVSAEFRGLWDRMGLSYDKFIRTTDPEHIRGVQALIKRLQDRGYIYKGK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSG Y + DE Y + D       G        P + + EE YFF+LSA ++ LL  Y S 
Sbjct: 123 YSGQYCVYDELYVDVD-----TPGAPCPECGRPTETVHEENYFFKLSAMEEPLLKLYASD 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P FI P  RRNEVISFV+ GLKDLS+SR TF WGI +PDDP +++YVWIDAL NY+T  G
Sbjct: 178 PNFIRPEARRNEVISFVRGGLKDLSISRTTFKWGIPVPDDPAHVIYVWIDALCNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +  +      KFWPAD+H++GK+I+RFH ++WPA L++A LPLPK + +HG++L +  K+
Sbjct: 238 FGSDDTKLYDKFWPADVHMVGKEIVRFHCVFWPAVLMAAGLPLPKSIVAHGWLLFEESKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN++    +++ +G DALRYFL+RE+  G+DG +  D L +R NADLANG+GNL S
Sbjct: 298 SKSRGNIVRTETILDVLGADALRYFLMREVVFGQDGSFSFDALVQRFNADLANGLGNLAS 357

Query: 364 RSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           R++SMI + + G +P P +    T +D++I  + ++ +++           +AL     L
Sbjct: 358 RTLSMITRYFKGEVPYPSSAATRTAADDAIAKIAAKTIEDFGAAFDQYQFSKALEAAWGL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ VD+Y    +PW L +   +    R +TVLY   E +R +  L    +P    KI+  
Sbjct: 418 VAAVDKYIVENEPWALAEKQDEQSRARLATVLYTAAEALRIVTALAYPVIPDSTAKIWSQ 477

Query: 477 LFVAD 481
           L + D
Sbjct: 478 LGLGD 482


>gi|86609674|ref|YP_478436.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558216|gb|ABD03173.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 518

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/473 (43%), Positives = 295/473 (62%), Gaps = 7/473 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y NA PHIG AY  ++AD +AR+HRL G DVL  TGTDEHGQKI + A+  G+ 
Sbjct: 8   ITTPIYYVNAAPHIGSAYTTLVADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEERGIP 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  F  +  +LDI YD FIRTT  RH    R  ++++ D+GDI+ G   GWY
Sbjct: 68  PQQHCDEIAAQFAQLWQLLDIRYDRFIRTTNPRHKAIVREFFQRVWDQGDIFIGRQQGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + ++ E+ +G     +  +   V+W +EE YFFRLS YQ+KL + Y  HPEFI 
Sbjct: 128 CVACEEFKDEAELLEGGFCPLHPTKK--VEWKDEENYFFRLSRYQEKLEALYAEHPEFIQ 185

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247
           P  RRNEVI+FVK GL+D S+SR +  WGI  P DP   +YVW DAL NY++      D 
Sbjct: 186 PESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPGQTLYVWFDALINYISAALDPDDE 245

Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           P  + A  ++WPAD+H++GKDI+RFHAIYWPA L+SA LPLPK+VF HGF+   G K+SK
Sbjct: 246 PTLANALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAGLPLPKQVFGHGFLTKDGLKMSK 305

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN +DP E++++ G DA+RY+ + EI  GKDG + +      +NADLAN +GNL++R+
Sbjct: 306 SLGNTVDPFELVQQYGADAVRYYFLTEIELGKDGDFSEGRFVDVLNADLANDLGNLLNRT 365

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++M L+ Y      P     +D  + ++  R+   + +  +      A  + +SL    +
Sbjct: 366 LNM-LRKYQSDYRVPAVGIPADHPLKTLAERLAPAVADAYERLDPSSAARKALSLAQASN 424

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y D Q PW L K+   +R + +LY  +E +R +A+LL   +P L+ KI   L
Sbjct: 425 KYLDEQAPWTLHKQGQNERVAQILYAVLESVRWVAVLLSPLIPALSLKILQQL 477


>gi|77406524|ref|ZP_00783576.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77174863|gb|EAO77680.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 665

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/520 (40%), Positives = 327/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S+  KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVEXXGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+   V+      +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLEAVMSHLAASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 520


>gi|15672774|ref|NP_266948.1| methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|25009394|sp|Q9CHE0|SYM_LACLA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12723712|gb|AAK04890.1|AE006312_10 methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 662

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/519 (40%), Positives = 319/519 (61%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +     ++++ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +E+++   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+ HP+FI P  R+NE+++ F+K GL+DL+L+R +F WGI +P +P++++YVW D
Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D +  K+WP  ++++GK+I+RFH IYWP  L +  LP PKK+F+H
Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWPG-INMVGKEIVRFHTIYWPIMLHALGLPAPKKIFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A  + VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + + +   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518


>gi|326406343|gb|ADZ63414.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 662

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/519 (40%), Positives = 319/519 (61%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +     ++++ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +E+++   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+ HP+FI P  R+NE+++ F+K GL+DL+L+R +F WGI +P +P++++YVW D
Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D +  K+WP  ++++GK+I+RFH IYWP  L +  LP PKK+F+H
Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWPG-INMVGKEIVRFHTIYWPIMLHALGLPAPKKIFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A  + VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + + +   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518


>gi|329121037|ref|ZP_08249668.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471199|gb|EGF16653.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 634

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/526 (42%), Positives = 326/526 (61%), Gaps = 28/526 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+A+ HIGH Y   +AD +ARF RLDG DV F  G+DEHGQKI +
Sbjct: 1   MSEKQAFYITTPIYYPSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AGVT   +VD+  + F+ +   L+IS DDFIRTTE+RH    + L+ K  DKGDIY
Sbjct: 61  KATEAGVTPIEYVDKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFHKAYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           KG Y GWY +  E ++ + ++ +G   AD +         + + EE YFF++S Y D+ L
Sbjct: 121 KGKYEGWYCVPCETFWPESKLLEGNLCADCK------RECKRVSEEAYFFKMSKYADRWL 174

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            + E +P FI P  RRNE+I FVK+GL+DL +SR +F WGI +P DP++++YVW DALTN
Sbjct: 175 KFIEENPHFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTN 234

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  G  D+ +  K K+WPAD+H++GK+I+RFH I WP  L+S ++ +PK+V+ HG+++
Sbjct: 235 YLTAVGIKDDKEKFK-KYWPADVHLVGKEIVRFHTIIWPIMLMSLDIEIPKQVYGHGWLV 293

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +GEK+SKS GNV+DPI +I E G DA+RY+L+ +I  G DG + +D L  R+N+DL+N 
Sbjct: 294 VEGEKMSKSKGNVVDPIPLIHEFGSDAIRYYLMNDIQLGSDGNFGRDRLINRINSDLSND 353

Query: 358 IGNLVSRSVSMILK-----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +GNL+ R++SM+ K      Y G I       ++  +I +    VL+  +  M N  I+ 
Sbjct: 354 LGNLLYRTLSMVEKYRNGIVYKGDITGDKVIEDASLNIENDLINVLENYKYGMNNWKIND 413

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V + V  +++Y D   PW L K  +  D    VLY   E +R ++I +   +P  A
Sbjct: 414 ALKSVWTYVRSLNKYIDITMPWTLAKDESKKDLLDAVLYHLCEGLRVVSIFVSPVIPIAA 473

Query: 471 NKIFDILFVADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510
            K+++ L + D    F+S+        + +    ++K   PIFPR 
Sbjct: 474 EKMWNQLGLKD----FKSVQLSDVTWGKFEENTKINKGL-PIFPRI 514


>gi|325663738|ref|ZP_08152142.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470231|gb|EGC73464.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 643

 Score =  415 bits (1066), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/497 (43%), Positives = 318/497 (63%), Gaps = 13/497 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 13  DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AGVT K FVD  +   +++AD+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 73  QEAGVTPKEFVDGVAAQVKEIADLMNTSYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 132

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 133 YYEGMYCTPCEAFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHINT 188

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 189 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 248

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S+   K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 249 IGYDCDGENSEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 308

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 309 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANTLG 368

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   E D  + +V  R    + E M    +  A+ ++ +
Sbjct: 369 NLVNRTISMTNKYFGGIVTDKGITEEVDAELKAVVERTPGAVDEKMDKLRVADAITEIFN 428

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY  +  I + A LL +F+P+ + KI   L
Sbjct: 429 LFKRCNKYIDETMPWALAKEEAKKDRLETVLYNLITSISKGAELLSSFMPETSEKILAQL 488

Query: 478 ---FVADENR-CFQSLD 490
               V D+    FQ LD
Sbjct: 489 NGGHVTDKPEILFQRLD 505


>gi|331087261|ref|ZP_08336331.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408947|gb|EGG88408.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 632

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/497 (43%), Positives = 318/497 (63%), Gaps = 13/497 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AGVT K FVD  +   +++AD+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 62  QEAGVTPKEFVDGVAAQVKEIADLMNTSYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 122 YYEGMYCTPCEAFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S+   K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGENSEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   E D  + +V  R    + E M    +  A+ ++ +
Sbjct: 358 NLVNRTISMTNKYFGGIVTDKGIAEEVDAELKAVVERTPGAVDEKMDKLRVADAITEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY  +  I + A LL +F+P+ + KI   L
Sbjct: 418 LFKRCNKYIDETMPWALAKEEDKKDRLETVLYNLITSISKGAELLSSFMPETSEKILAQL 477

Query: 478 ---FVADENR-CFQSLD 490
               V D+    FQ LD
Sbjct: 478 NGGHVTDKPEILFQRLD 494


>gi|125624554|ref|YP_001033037.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|281491288|ref|YP_003353268.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|124493362|emb|CAL98336.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|281375029|gb|ADA64547.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|300071348|gb|ADJ60748.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 662

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/519 (40%), Positives = 318/519 (61%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +     ++++ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +E+++   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+ HP+FI P  R+NE+++ F+K GL+DL+L+R +F WGI +P +P++++YVW D
Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D +  K+WP  ++++GK+I+RFH IYWP  L +  LP PKK+F H
Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWPG-INMVGKEIVRFHTIYWPIMLHALGLPAPKKIFGH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A  + VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + + +   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518


>gi|160947754|ref|ZP_02094921.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
 gi|158446888|gb|EDP23883.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
          Length = 649

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/473 (42%), Positives = 304/473 (64%), Gaps = 7/473 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YPN+  H+GH Y  I+ADVL ++ +  G DV FTTGTDEHGQK+ ++A
Sbjct: 2   EKKNFYLTTPIYYPNSNLHLGHTYTTIVADVLKKYKQAQGFDVFFTTGTDEHGQKLQESA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG     ++D    + +++   LDI +D F+R+T+K H      ++ K+ +KG+IYKG
Sbjct: 62  IKAGKAPLEYIDPIVESAKELWRTLDIDFDAFVRSTDKIHEKNVSEIFTKLYEKGEIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  EA++ + ++ +G        + +P    EEE YFFRLS YQD+LL  YE 
Sbjct: 122 SYKGMYCVPCEAFWTESQLVEGNKCPDCGREVSP---SEEETYFFRLSKYQDRLLKLYEE 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  R+NE+ISF+  GL DLS++R +FDWG+++P D ++++YVWIDAL+ YLT  
Sbjct: 179 NPDFIQPESRKNEMISFINEGLTDLSVTRSSFDWGVRVPFDEKHVVYVWIDALSCYLTGI 238

Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY    D  K  KFWP D+H+IGK+I+RFHAI WPA L++ +LPLPKK+F HG+IL   +
Sbjct: 239 GY--GTDEEKFNKFWPCDVHLIGKEIMRFHAIIWPAILMALDLPLPKKIFGHGWILFDDD 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++    +IE  G+DALRYF++RE   G+DG +    +  R+N+DL N +GNL
Sbjct: 297 KMSKSKGNIVYAEPIIERYGMDALRYFMLREFTFGQDGNFTYTKMLNRINSDLVNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSRSV+M  K +DG +P+    TE D  ++ + +     + E M       AL ++  LV
Sbjct: 357 VSRSVAMCEKYFDGFVPSQTELTELDNDLIEIATTTRDRVAELMDKLNFSMALEEIWKLV 416

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++Y D   PW L K+   +R  TV+Y  +E IR ++ L++ F+ + + +I
Sbjct: 417 RRTNKYIDETTPWTLIKEQKEERLKTVIYNLLESIRIISGLIKPFMKETSLRI 469


>gi|158604929|gb|ABW74748.1| methionyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 644

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/511 (43%), Positives = 319/511 (62%), Gaps = 10/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI+T I Y N  PHIGHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+
Sbjct: 2   KEKAYITTPIYYVNDVPHIGHAYTTIIADTLARFNRLQGKETYFMTGTDEHGQKIEQAAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T K + D+ S  FR + D  +ISYD FIRTT++ H  T + +++K+   GDIYKG 
Sbjct: 62  ARGKTPKEYADEISAKFRSLWDEFEISYDHFIRTTDEEHKQTVQNVFEKMQVNGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y +  E ++N  ++ +  D +  +        ++EE YFF+LS Y+D LL +YE+ 
Sbjct: 122 YEGFYCVSCETFFNQRDLLE--DNRCPDCGR-VTSLVKEESYFFKLSKYEDALLKWYEND 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240
              ++P  ++NEV+SFVK GLKDLS++R +FDWGIK+P   +D +++MYVW+DAL NYLT
Sbjct: 179 ELCVIPKGKKNEVVSFVKGGLKDLSVTRTSFDWGIKLPKSANDDKHVMYVWLDALINYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           T GY  + D ++  FWP   H++GKDILRFHA+YWPAFL+S  LPLPK V +HG+    G
Sbjct: 239 TLGY--SRDNARMDFWPHTTHIVGKDILRFHAVYWPAFLMSLGLPLPKHVAAHGWWTIDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNVI+P EV    G++  RYFL+RE+  G+DG Y +  L +R+N++L NG+GN
Sbjct: 297 EKMSKSKGNVINPREVANAYGLENFRYFLLREVPFGQDGDYSQKALIERINSELGNGLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR V M  K  D  I +     +  ++ L      L E  +N++N   +R L  +  +
Sbjct: 357 LLSRIVGMSAKYSDYKIDSKDVI-KFHKAELDEAKGYLDEAIKNLENLATNRYLEDLWKV 415

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V+  +      +PW L K    D A+ ++ +   ++ ++AILL   +PK   KI D L  
Sbjct: 416 VTLANAAVAKYEPWSLVKAGKSDEANALVALCANLLAKVAILLSPAMPKTCAKIADTLGF 475

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +   ++SL  + +      K   P+FPR 
Sbjct: 476 SIDTASYESLVLKNEISNFTAKATGPLFPRI 506


>gi|295425704|ref|ZP_06818391.1| methionine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064720|gb|EFG55641.1| methionine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 658

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/524 (41%), Positives = 322/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKKTFYITTPIYYPSGKLTIGNAYTTIAADSMARYKRAQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +  +LDISYD FIRTT+ +H    + +++K+  +GDIY
Sbjct: 61  KAEKQGIKPQEFVDKMAASYKKLWKMLDISYDKFIRTTDPQHVKAVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVQLVREPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLVQYYKDHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPK++F H
Sbjct: 241 ALSNYITALGYGSYDDSLFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++E  G+DALRY+L+REI  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVERYGLDALRYYLMREIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E    ++      + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGEVAPVASDQDELGTDLIKTAKETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K+   +  S V+    E +R +AIL+   + +   
Sbjct: 421 ALDAIWKLISRANKYIDETTPWTLNKEGKKEELSRVMSNLAESLRIVAILISPIMTESPL 480

Query: 472 KIFDILFV----ADENRC-FQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F  L +    A+E +  F   D  +K    + +   PIFPR 
Sbjct: 481 KMFKQLGLDWNNAEEKKLEFAGFDWNVK----VTEKPTPIFPRL 520


>gi|320527169|ref|ZP_08028356.1| methionyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132497|gb|EFW25040.1| methionyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 646

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/519 (40%), Positives = 328/519 (63%), Gaps = 16/519 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ ++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQK+ +
Sbjct: 1   MENKKPYYITTAIAYTSGKPHIGNVYEIVLADAIARFKRAEGYDVRFQTGTDEHGQKVEE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG T K FVD  +   +   DV++ SYD FIRTT++ H    + ++KK  D+GDIY
Sbjct: 61  KAKAAGKTPKQFVDDVAAVIKQQFDVMNTSYDYFIRTTDEAHERQVQKIFKKFYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y   DEA+Y   ++ +         +  P   M+EE YFF++S Y D+L+ Y 
Sbjct: 121 KGYYEGLYCQEDEAFYTKSQLTEDGKCPVCGGEVVP---MKEEAYFFKMSKYADQLMKYI 177

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP FI P  R+NE+++ F+K GL+DL +SR +F WGI +  DP++++YVWIDAL+NY+
Sbjct: 178 DEHPHFIQPESRKNEMVNNFLKPGLQDLCVSRTSFKWGIPVEFDPKHVVYVWIDALSNYI 237

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      K+WPADLH+IGKDI+RFH IYWP  L++   PLPK+VF H +
Sbjct: 238 TGLGY--DADGNHGPLYKKYWPADLHLIGKDIIRFHTIYWPIMLMALKEPLPKQVFGHPW 295

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GNVI   ++++  GVDA+R+ ++ E+   +DG    D + +R+N+DLA
Sbjct: 296 LLIGDSKMSKSHGNVIYADDLVKLFGVDAVRFIMLHEMPFAQDGHVTYDLMIERINSDLA 355

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R++SM  K + G++  P      D+ + +  +  ++++ E M    +  A+ 
Sbjct: 356 NNLGNLVNRTISMQNKYFGGVVANPNVSEPIDDELKAFATGTVKKVVEKMDELRVADAIQ 415

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++ L S  ++Y D   PW L K +   +R +TVLY  +E +R  A+L++ F P+ + KI
Sbjct: 416 DILDLFSRCNKYIDETTPWALAKDSEKIERLATVLYNLLESVRIAAVLMEPFFPETSKKI 475

Query: 474 FDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            D L    + R F+++ +  +L+ G  + +  + +F R 
Sbjct: 476 LDDL--NTQQRDFETISEFGKLETGIHVAEKPEILFARI 512


>gi|90961208|ref|YP_535124.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius UCC118]
 gi|90820402|gb|ABD99041.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Lactobacillus salivarius UCC118]
          Length = 675

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/522 (40%), Positives = 322/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++ F+K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+  +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMIAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP      T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|325264425|ref|ZP_08131156.1| methionine--tRNA ligase [Clostridium sp. D5]
 gi|324030496|gb|EGB91780.1| methionine--tRNA ligase [Clostridium sp. D5]
          Length = 645

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/501 (42%), Positives = 322/501 (64%), Gaps = 17/501 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 11  MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD  + + R + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 71  KAEEAGITPKEFVDDVAADIRRIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLFDQGDIY 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++   ADG+  +     VQ  +EE YFF++S Y D+L+ + 
Sbjct: 131 KGHYEGMYCTPCESFFTESQL---ADGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHI 186

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 187 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVEFDPKHVVYVWLDALTNYI 246

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H +
Sbjct: 247 TGIGY--DCDGNNTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPW 304

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N++LA
Sbjct: 305 LLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSELA 364

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R+VSM  K + G +   G   E D  + +V     +++   M    +  A+ 
Sbjct: 365 NTLGNLVNRTVSMTNKYFAGTVCDKGVAEEVDADLKAVMESTPKKVEAKMDELRVADAIT 424

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ +L    ++Y D   PW L K     DR  TVL+  ++ I   A+LL++F+P  + KI
Sbjct: 425 EIFNLFKRCNKYIDETMPWVLAKDEAKKDRLETVLWNLIQGISAGAVLLESFMPSTSKKI 484

Query: 474 FDIL---FVADENRC-FQSLD 490
            + L    V D+    FQ LD
Sbjct: 485 LEQLNDGHVTDKPEILFQRLD 505


>gi|199597844|ref|ZP_03211270.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258509579|ref|YP_003172330.1| methionyl-tRNA synthetase/ protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|199591280|gb|EDY99360.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257149506|emb|CAR88479.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|259650846|dbj|BAI43008.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 660

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/521 (40%), Positives = 323/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++ +LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW+L K     D+  +V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 VQIFGQLGLDHENEDHKVVKWGALPAGAKVVEQGTPIFPRL 521


>gi|77408311|ref|ZP_00785053.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173074|gb|EAO76201.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 665

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/520 (40%), Positives = 328/520 (63%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
              Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LDEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S+  KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGATFDLEKLTFADLPEGVRVVAKGSPIFPRL 520


>gi|153816358|ref|ZP_01969026.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756]
 gi|317501006|ref|ZP_07959214.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145846319|gb|EDK23237.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756]
 gi|316897584|gb|EFV19647.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 633

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/482 (43%), Positives = 312/482 (64%), Gaps = 9/482 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGVTPKEFVDGVSAEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ + 
Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + D ++  AK WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L
Sbjct: 237 TGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G++   GA  + D  + +V     + +   M    +  A+ ++
Sbjct: 357 LGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKAVIDNTPKAVDAKMDGLRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I   A LL++F+P  + KI D
Sbjct: 417 FNLFKRCNKYIDETMPWALAKDEEKKDRLETVLWNLIQGISAGARLLESFMPSTSKKILD 476

Query: 476 IL 477
            L
Sbjct: 477 QL 478


>gi|299143372|ref|ZP_07036452.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517857|gb|EFI41596.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 657

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/511 (41%), Positives = 319/511 (62%), Gaps = 9/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +K Y++T I YP+   HIGH Y  + AD + ++ +L G DV FTTGTDEHGQKI + A 
Sbjct: 2   EKKYYLTTPIYYPSGNLHIGHTYCTVAADCIKKYKKLQGYDVFFTTGTDEHGQKIQQKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K +VD    + +++   +DI YD FIR+T+  H    + ++KK+ +KG+IYK  
Sbjct: 62  EEGLEPKEYVDNIVVSIKELWSKMDIDYDAFIRSTDPEHEKNVQEIFKKLYEKGEIYKSQ 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y  + EA++ + ++    DG             +EE YFF+LS Y+D+LL YYE H
Sbjct: 122 YEGHYCTQCEAFWTESQL---KDGDKCPDCGRETHIEKEESYFFKLSKYRDRLLKYYEDH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P+ R+NE+I+ F+K GL DLS++R +FDWG+K+P D ++I+YVWIDAL+ YL+  
Sbjct: 179 PDFIEPVSRKNEMINNFLKDGLDDLSVTRSSFDWGVKVPFDDKHIVYVWIDALSCYLSAI 238

Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY    D  K  KFWPAD+H++GK+I+RFH I WPA L++ +LPLP+K+F HG+IL   +
Sbjct: 239 GY--GTDNEKFEKFWPADVHLVGKEIIRFHTIIWPALLMALDLPLPEKIFGHGWILFDND 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI P  +I+  GVDAL+YFL+RE + G DG ++++   +R+N+DLAN +GNL
Sbjct: 297 KMSKSKGNVIYPEPIIKLYGVDALKYFLLREFSFGSDGSFNREKFMQRLNSDLANDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR +SMI K  DG IP+     E DE ++++ +  + ++   M++     AL ++ +L+
Sbjct: 357 VSRIISMIEKYNDGYIPSATVSEEVDEDLINIATTTMTKVDSAMEHFEFSVALEEIWNLI 416

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K  +N  R  +VLY   E +R  ++L+  F+ + + +I   L V
Sbjct: 417 RRCNKYVDETTPWILAKDESNKPRLDSVLYNLAEALRITSVLINPFISETSREIRKSLRV 476

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             E +   S    L       K    +FPR 
Sbjct: 477 KGEVKWEDSAIWGLTEAGEHVKNVGVLFPRL 507


>gi|294793443|ref|ZP_06758580.1| methionine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455013|gb|EFG23385.1| methionine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 648

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/515 (40%), Positives = 317/515 (61%), Gaps = 13/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY   DE ++ + ++  G +    +    PV+ ++EE YFF+L  Y D+ L + E +
Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V S +  
Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIGR 421

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L +
Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
                   +L+     G +   T     +PI+PRF
Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514


>gi|331089040|ref|ZP_08337946.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330406240|gb|EGG85759.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 633

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/482 (43%), Positives = 312/482 (64%), Gaps = 9/482 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAVARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGVTPKEFVDGVSAEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ + 
Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + D ++  AK WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L
Sbjct: 237 TGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G++   GA  + D  + +V     + +   M    +  A+ ++
Sbjct: 357 LGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKAVIDNTPKAVDAKMDGLRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I   A LL++F+P  + KI D
Sbjct: 417 FNLFKRCNKYIDETMPWALAKDEEKKDRLETVLWNLIQGISAGARLLESFMPSTSKKILD 476

Query: 476 IL 477
            L
Sbjct: 477 QL 478


>gi|191639512|ref|YP_001988678.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|190713814|emb|CAQ67820.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|327383610|gb|AEA55086.1| Methionyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386801|gb|AEA58275.1| Methionyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 660

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +     P G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521


>gi|317133508|ref|YP_004092822.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471487|gb|ADU28091.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 651

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/473 (42%), Positives = 300/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y  +  D +ARF R+ G DVLF TGTDEHGQKI + A+
Sbjct: 2   KKTYYITTPIYYTSGTLHIGHGYTTVAGDAMARFRRMQGYDVLFLTGTDEHGQKIEERAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T K +VD+     + +  +LDISYD FIRTT+  H    + +++++ ++GDIYKG 
Sbjct: 62  AAGKTPKAYVDEIVAEIKSLWKLLDISYDRFIRTTDAAHEKVVQQIFRRLYEQGDIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    DG+  +     V+  EEE YFFRLS Y D+L+ +Y++H
Sbjct: 122 YEGWYCRPCESFWTETQL---KDGKCPDCGRE-VKRAEEEAYFFRLSKYADRLVEHYKAH 177

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R +E+++ F+K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T  
Sbjct: 178 PEFISPPSRMHEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDPGHVIYVWIDALSNYITAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D    K+WPAD+H++ K+I+RFH I WPA L++   PLPK+VF HG++L  G+K
Sbjct: 238 GYGTENDADYRKYWPADVHLMAKEIVRFHTIIWPAILMALGEPLPKRVFGHGWLLLGGDK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ + +   VDA+RYFL+REI  G D  +  + L  R+NADLAN +GNLV
Sbjct: 298 MSKSKGNVVDPVLLCKRYSVDAIRYFLLREIPFGADSTFSTEALLGRINADLANDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K + G++P  G     D+ + ++ +   + +  +M       ALA +   VS
Sbjct: 358 SRTVAMVEKYFGGVLPAAGESGPFDDKLRALAAETAKAVEADMDAFQFSNALADIWKFVS 417

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K   D  R + VL    E +R +++ +  F+P  A +I
Sbjct: 418 RTNKYIDETAPWILAKNEADKPRLAQVLRNLCESVRLISVCIAPFMPATAAEI 470


>gi|154506267|ref|ZP_02043005.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149]
 gi|153793455|gb|EDN75875.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149]
          Length = 639

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/490 (43%), Positives = 314/490 (64%), Gaps = 19/490 (3%)

Query: 1   MKEREKL------YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH 54
           MKER ++      YI+TAIAY + +PHIG+ YE+I+AD +AR+ R  G DV F TGTDEH
Sbjct: 1   MKERREMADKKPYYITTAIAYTSGKPHIGNTYEIILADAIARYKRSQGYDVFFQTGTDEH 60

Query: 55  GQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
           GQKI   A+ AGVT K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ 
Sbjct: 61  GQKIELKAEEAGVTPKEFVDNVSGEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLY 120

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           D+GDIYKG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D
Sbjct: 121 DQGDIYKGHYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYAD 176

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +  +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP+++ YVW+D
Sbjct: 177 RLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVTYVWLD 236

Query: 234 ALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           ALTNY+T  GY  + DG+      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+
Sbjct: 237 ALTNYITGIGY--DCDGNSTEQFHKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQ 294

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           VF H ++L    K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R
Sbjct: 295 VFGHPWLLQGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVER 354

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +N+DLAN +GNLV+R+VSM  K + G +   G   E D  + +V     + + + M+   
Sbjct: 355 MNSDLANTLGNLVNRTVSMTNKYFSGTVTDKGVAEEVDADLKAVTESTPKAVEDKMEELR 414

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  A+ ++ +L    ++Y D   PW L K     DR  TVL+  ++ I + A LL++F+P
Sbjct: 415 VADAMTEIFNLFKRCNKYIDETMPWVLAKDEAKKDRLETVLWNLIQSISRGAELLESFMP 474

Query: 468 KLANKIFDIL 477
             + KI + L
Sbjct: 475 STSKKILEQL 484


>gi|319745565|gb|EFV97867.1| methionine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 671

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/517 (40%), Positives = 327/517 (63%), Gaps = 10/517 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI + A+
Sbjct: 10  KKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY G 
Sbjct: 70  EAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGE 129

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D+L 
Sbjct: 130 YTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYADRLK 189

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWIDAL 
Sbjct: 190 AYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWIDALM 249

Query: 237 NYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY++  GY  + D S+  KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +HG+
Sbjct: 250 NYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVAHGW 309

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 310 FVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 369

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     RAL 
Sbjct: 370 NDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPRALE 429

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F+ + ++ I
Sbjct: 430 AVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETSDAI 489

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +       +     L  G  +     PIFPR 
Sbjct: 490 MEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 526


>gi|116496032|ref|YP_807766.1| methyonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116106182|gb|ABJ71324.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 660

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +     P G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521


>gi|323340524|ref|ZP_08080779.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092068|gb|EFZ34685.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 678

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 3   MAEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGFDVFFLTGTDEHGLKIEE 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   +T + +VD  + + + +   L+IS D FIRTT+  H      +++K+  KGDIY
Sbjct: 63  KAEELNMTPQEYVDSMAESIKKLWKQLEISNDKFIRTTDDYHVKAVEQIFEKLLKKGDIY 122

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    + V+ +EE+ YFF++S Y D
Sbjct: 123 LGKYKGWYSVSDEEYFTESQLAEVYRDENGKMIGGKAPSGHEVELVEEDCYFFKMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY  HP+FI+P  R+NE+++ F+  GL+DL+L+R +F+WG+ +P +P++++YVWID
Sbjct: 183 RLVEYYNEHPDFIMPETRKNEMLNNFINPGLEDLALTRTSFNWGVPVPSNPKHVIYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D    ++WPAD+H++GK+I+RFH IYWP  L++ +LPLPK V  H
Sbjct: 243 ALCNYITALGYGSDDDSLFNRYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHVLGH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVYPEMIVERYGLDALRYYLIRAVPYGNDGIFTPEDFVNRVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G +P      T  D+S+       L+     ++      
Sbjct: 363 LANDLGNLLNRTVAMINKYRGGNVPELVSGVTAFDKSLEDAFEEALKGYESELEQAHFTV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL ++   VS  ++Y D  +PW L K  +  +   +VL      +R +AILLQ  +    
Sbjct: 423 ALEKLWKFVSRTNKYIDETEPWALAKDESKANELDSVLAHLAASLRVIAILLQPVMTHAP 482

Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
            K+F+ L + +EN   + LD    P G  + +   PIFPR 
Sbjct: 483 KKMFEQLGLPEENMDIKGLDFFAFPSGIKVVEKGTPIFPRL 523


>gi|312880384|ref|ZP_07740184.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783675|gb|EFQ24073.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 648

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/479 (43%), Positives = 292/479 (60%), Gaps = 9/479 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R   YI+T I Y N  PHIGHAY  I ADVLAR HR+ G    F TGTDEHGQKI +A
Sbjct: 3   EQRTPFYITTPIYYVNDVPHIGHAYTTIAADVLARHHRMLGDPTTFLTGTDEHGQKIQQA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T     DQ   NFR +  VL+I+ DDFIRTTE RH    + ++  + +KGDIY 
Sbjct: 63  AAAKGLTALQLADQTVENFRRLWKVLNITNDDFIRTTEPRHEKVVQHIFSTLLEKGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY +  E Y  + ++    +G        P+Q M E+ YFFR+S Y+  LL YYE
Sbjct: 123 GSYEGWYCVPCETYVPEAQM---GEGNTCPDCGRPLQKMTEQSYFFRMSKYEQPLLDYYE 179

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             PE ILP  R NE++SF++ GLKD S+SR T  WG+ +P D Q+++YVW DAL NYL+ 
Sbjct: 180 GLPEAILPRTRANEILSFLRGGLKDQSISRTTMKWGVPVPGDEQHVVYVWFDALINYLSA 239

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY   P+  K    FWP   H++GKDI+RFH++ WPA LL+  L  PK+VF+HG+   +
Sbjct: 240 LGY---PEAGKPWETFWPVAHHLVGKDIIRFHSVVWPALLLALGLQPPKRVFAHGWWTVE 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP E+ E  GVD  RYFL+RE+  G DG + +  L +R NADLAN +G
Sbjct: 297 GDKMSKSKGNVVDPFEMAERYGVDVFRYFLLREVPFGLDGDFSELALVQRSNADLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ M+ K   G +P+       D  +  +  R  +E+   ++      AL  + +
Sbjct: 357 NLLNRTLQMVEKYCGGQVPSAVHPEALDRELEILAGRTAEEMDRLLERFAFDEALKALWA 416

Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   ++Y D   PW L K+ N +R  TVL    E +RQ A+L   F+P+ A +++D L
Sbjct: 417 FLGRSNKYIDENLPWNLAKEGNQERLDTVLRTLFEALRQAALLSAPFLPETAQRMWDQL 475


>gi|303231911|ref|ZP_07318620.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513440|gb|EFL55473.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 649

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/514 (41%), Positives = 314/514 (61%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTFYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDFIRTT+ RH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDARHEKVVQELFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++    +         PV+ ++EE YFF+L  Y D+ L + E +
Sbjct: 125 YEGWYCTPCESFWTEQKL---GENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       KFWPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDP  +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPNPLIDIYGADSLRYYLLSEITLGHDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D+ I S+  + + +    M+   +++AL  V + +S 
Sbjct: 362 RTIAMIEKYHGGIITKTDDVDDLDKEISSLAEQTVADFESQMEAMELNKALKTVWAFISR 421

Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K++ +    R  +V+Y   E +R +A+L+   +P  A KI++ L +
Sbjct: 422 MNKYIDETMPWVLAKSSDEADVHRLKSVMYHLAESLRIIAVLVSPVIPVGAPKIWEQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510
                  Q  D R   G          +PI+PRF
Sbjct: 482 GGFEDV-QLDDVRTWGGIQTGTKVVKGEPIYPRF 514


>gi|218281348|ref|ZP_03487826.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989]
 gi|218217440|gb|EEC90978.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989]
          Length = 641

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/517 (40%), Positives = 327/517 (63%), Gaps = 18/517 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++E  Y++TAIAY + +PHIG+ YE+I++D +ARF R  G DV F TGTDEHG KI + 
Sbjct: 3   QKKEPFYLTTAIAYTSGRPHIGNTYEIILSDAIARFKRAQGYDVFFQTGTDEHGVKIEEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGVT + FVD  +   +   D+++ SYD F+RTT+  H    + ++K++ D+GDIYK
Sbjct: 63  AKAAGVTPQEFVDGVAAQIKSNWDLMNTSYDYFVRTTDDYHVKEVQSIFKRLYDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++  G           PV+  +EE YFF +  Y D+L+ Y E
Sbjct: 123 GTYEGWYCTPCESFWTESQLVDGCCPDC----GRPVKKAKEEAYFFNMQKYADRLIKYIE 178

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            HP+FI P  R+NE+++ F++ GL+DL +SR +F WG+ +  DP++++YVWIDAL+NY+T
Sbjct: 179 DHPDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALSNYIT 238

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T GY  N +  +   K+WPA  H+IGKDILRFH IYWP  L++ +LPLPKKVF H ++L 
Sbjct: 239 TLGYHANGESDEKFKKYWPA-THIIGKDILRFHTIYWPIILMALDLPLPKKVFGHPWLLT 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNVI   +++E  GVDA+RY+ + E+   +DG    D + +R+N+DLAN +
Sbjct: 298 GSDKMSKSKGNVIYAEDLVEHFGVDAVRYYCLHEMPFAQDGTITWDLVIERINSDLANIL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSR+++M  K + G++  P      DE + +      +++   M+   +  AL ++ 
Sbjct: 358 GNLVSRTIAMSNKYFGGLVTNPNVCEAVDEELKACALETKKKVEAKMEELRVGDALDEIF 417

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +L+   ++Y D   PW L K  +  DR +TVLY  +E IR  A+LL +F+P+ A K+F  
Sbjct: 418 TLLRRTNKYIDETMPWVLAKDESKQDRLATVLYNLLESIRISAVLLHSFLPETAEKMFAY 477

Query: 477 LF--VADENRC--FQSLDQRLKPGFMLHKTFDPIFPR 509
           L   V D + C  F +L+  +     + +  +P+F R
Sbjct: 478 LNTKVTDLDSCDSFGNLETDIH----VVEKCEPLFAR 510


>gi|313888600|ref|ZP_07822265.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845329|gb|EFR32725.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 651

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/519 (42%), Positives = 323/519 (62%), Gaps = 25/519 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I YP+   HIGH Y  +  D + RF  + G DV FTTGTDEHGQKI   A+ 
Sbjct: 4   KKFYVTTPIYYPSDNLHIGHTYCTVAVDCVKRFKTMQGYDVFFTTGTDEHGQKIEDKAKE 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K +VD   +N + + +++DI YD F+R+T++ H    + +++K+ DKGDIYKG Y
Sbjct: 64  FGMEPKAYVDGIVKNIKKLWEIMDIDYDYFVRSTDEDHEKDVQEIFQKLYDKGDIYKGEY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y    E+++ + ++    +G          +   EE YFFRLS Y+D+LL YYE HP
Sbjct: 124 KGYYCKPCESFWTEAQL---GEGHTCPDCGRSTELTNEESYFFRLSKYKDRLLKYYEDHP 180

Query: 185 EFILPIERRNEVISFV---KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           EFI P  R+NE++      +SGL+DLS+SR TFDWG+K+P DP++++YVWIDALT YLT 
Sbjct: 181 EFIEPAFRKNEMVKNFFEGESGLEDLSVSRSTFDWGVKVPFDPKHVVYVWIDALTCYLTA 240

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY    D  K   +WPAD+H +GK+I+RFH I WPA L++ +LPLP KVF HG+IL   
Sbjct: 241 IGY--GTDKEKFNDYWPADVHFVGKEIIRFHVIIWPAILMALDLPLPDKVFGHGWILFDN 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNVI P  +I+  GVDAL+YFL+RE + G DG ++ +   +R+N+DLAN +GN
Sbjct: 299 DKMSKSKGNVIYPEPIIKLYGVDALKYFLLREFSFGSDGSFNIEKFMQRLNSDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  DG+I   G   E D+ + ++   V+  + + M++     AL  +  L
Sbjct: 359 LLSRTVSMIGKYNDGIIKDMGVREEVDDDLENLAVSVVDNVEKAMEHYEFSVALEAIWKL 418

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI----- 473
           +   ++Y D  +PW+L K     DR +TVLY   E +R +++L+  F+ + + KI     
Sbjct: 419 IRRTNKYVDETEPWKLAKDEDKKDRLNTVLYNLAESLRIVSVLIYPFIKETSLKIREQLG 478

Query: 474 FDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            D     +++R F  L  D +++ G       + IFPR 
Sbjct: 479 LDSKVSWEDSRVFGLLPDDTKVRKG-------EVIFPRL 510


>gi|269797679|ref|YP_003311579.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094308|gb|ACZ24299.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 648

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/515 (40%), Positives = 318/515 (61%), Gaps = 13/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQELFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY   DE ++ + ++  G +    +    PV+ ++EE YFF+L  Y D+ L + E +
Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D  + ++  + +++    M+N  +++A+  V S +  
Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTVKDFEATMENMELNKAIKIVWSFIGR 421

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L +
Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKVRLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
                   +L+     G +   T     +PI+PRF
Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514


>gi|294791589|ref|ZP_06756737.1| methionine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294456819|gb|EFG25181.1| methionine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 648

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/515 (40%), Positives = 317/515 (61%), Gaps = 13/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPFEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY   DE ++ + ++  G +    +    PV+ ++EE YFF+L  Y D+ L + E +
Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V S +  
Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIGR 421

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L +
Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKVRLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
                   +L+     G +   T     +PI+PRF
Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514


>gi|226325813|ref|ZP_03801331.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758]
 gi|225205937|gb|EEG88291.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758]
          Length = 634

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/499 (42%), Positives = 314/499 (62%), Gaps = 13/499 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MADKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGVTPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDDYHEKEVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++    DG+  +    PVQ  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KGHYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFKMSKYADRLIEYI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +  +   K WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L
Sbjct: 237 TGIGYHCDGESDEMFNKNWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +   G   E D  + +V     + +   M    +  A+ ++
Sbjct: 357 LGNLVNRTISMTNKYFGGTVTDKGVAEEVDADLKAVTENTPKAVEAKMNELRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I + A LL++F+P+ A KI  
Sbjct: 417 FNLFKRCNKYIDETMPWALAKEEDKKDRLETVLWNLIQSISEGAKLLESFMPETAEKILA 476

Query: 476 IL----FVADENRCFQSLD 490
            L     V      FQ LD
Sbjct: 477 QLGGGHVVEKPEILFQRLD 495


>gi|239630434|ref|ZP_04673465.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067585|ref|YP_003789608.1| methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|239526717|gb|EEQ65718.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439992|gb|ADK19758.1| Methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 660

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/521 (40%), Positives = 319/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +     P G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 521


>gi|42518288|ref|NP_964218.1| methionyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582572|gb|AAS08184.1| methionyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329666598|gb|AEB92546.1| methionyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 658

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/520 (40%), Positives = 324/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++D+  +LD+SYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDKMADSYKDLWKMLDVSYDRFIRTTDEDHVKAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMRDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E  + ++   +  + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K+   +  S V+    E +R +AIL+   + +   
Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMTNLAESLRLIAILIAPVMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  +N   + LD         + +   PIFPR 
Sbjct: 481 KMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 520


>gi|238925543|ref|YP_002939060.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238877219|gb|ACR76926.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 673

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/500 (42%), Positives = 323/500 (64%), Gaps = 22/500 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TAIAY + +PHIG+ YE+I+AD +AR+ R +G DV F TGTDEHGQKI + A+ AG++
Sbjct: 1   MTTAIAYTSGKPHIGNTYEIILADAIARYKRAEGYDVYFQTGTDEHGQKIQEKAEAAGIS 60

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K +VDQ S   + + D+++ SYD+F+RTT++ H    + ++KK+ D+GDIYKG Y G Y
Sbjct: 61  PKEYVDQISGEVKRIWDLVNSSYDNFVRTTDEDHEKCVKKIFKKLYDQGDIYKGSYEGLY 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
               E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ Y  +HP+FI 
Sbjct: 121 CTPCESFWTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIDYINTHPDFIQ 176

Query: 189 PIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  GY  +
Sbjct: 177 PVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITKIGY--D 234

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           PDGS   F   WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  G+K+S
Sbjct: 235 PDGSSELFKKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGGDKMS 294

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI   +++   GVDA RYF++ E+    DG    D + +R N+DLAN +GNLV+R
Sbjct: 295 KSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGIITWDLVIERFNSDLANILGNLVNR 354

Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-----SVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +VSM  K +DG++ + GA  ++D++ +     +V +    ++ + M+   +  A+ +V +
Sbjct: 355 TVSMSNKYFDGIVKSTGATGDADQTAIDADLKAVVTGTRDKVAKKMEGLRVADAITEVFA 414

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR + VLY   E I   A LL +F+P+ A KI    
Sbjct: 415 LFRRCNKYIDETTPWVLAKDEAQQDRLAEVLYNLTESITIGASLLHSFLPETAEKI---- 470

Query: 478 FVADENRCFQSLDQRLKPGF 497
            VA  N   +  D   K G 
Sbjct: 471 -VAQLNTTLREFDDLDKFGL 489


>gi|223985467|ref|ZP_03635526.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
           12042]
 gi|223962556|gb|EEF67009.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
           12042]
          Length = 642

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/478 (43%), Positives = 315/478 (65%), Gaps = 9/478 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+TAIAY + +PHIG+ YE+++AD +AR+ R+ G DV F TGTDEHGQKI   A+ 
Sbjct: 3   EKYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMLGYDVFFQTGTDEHGQKIEDKAKA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV  + FVDQ +   +++ D+++ SYD F+RTT+  H    + ++KK+ D+GDIYK  Y
Sbjct: 63  AGVAPQQFVDQVAGQIKEIWDLMNTSYDKFMRTTDPDHERQVQKIFKKLYDQGDIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E+++ + ++    DG+  +    PV+  +EE YFFR+S Y D+LL + E +P
Sbjct: 123 EGWYCKPCESFFTESQI---VDGKCPDC-GAPVEKAKEEAYFFRMSKYADRLLKHIEENP 178

Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  R+NE+I+ F+K GL+DL +SR +F WG+ +  DP++++YVWIDALTNY+T  G
Sbjct: 179 EFIQPESRKNEMINNFIKPGLQDLCVSRTSFTWGVPVDFDPKHVVYVWIDALTNYITGLG 238

Query: 244 Y-LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y  D   G K K +WPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF H ++L    
Sbjct: 239 YDCDGNHGEKFKHYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLVGEG 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI   +++   GVDA+RY ++ E+   +DG    + + +R+N+DLAN +GNL
Sbjct: 299 KMSKSKGNVIYADDLVRYFGVDAVRYIMLHEMPFAQDGTVTYELMIERINSDLANILGNL 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R++SM  K + G++         D+ ++++       +++ M    +  A+ ++ +L+
Sbjct: 359 VNRTLSMTNKYFGGLVHNANVSDPIDDELIALAKATPANVQKKMDELRVADAIDEIFALL 418

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              ++Y D   PW L K  T  DR +TVLY  +E IR  AILL++++P+ +  I D L
Sbjct: 419 RRSNKYIDETMPWALGKDETKKDRLATVLYNLLESIRIAAILLESYLPETSKAILDQL 476


>gi|300362468|ref|ZP_07058644.1| methionine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353459|gb|EFJ69331.1| methionine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 681

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/524 (40%), Positives = 325/524 (62%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 24  MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++++  +LD+SYD FIRTT++ H    + +++K+  +GDIY
Sbjct: 84  KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 143

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFFR+S Y D
Sbjct: 144 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 203

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 204 RLLQYYKDHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 263

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 264 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 323

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 324 GWVLMKDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 383

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E  + ++   +  + E +++M      +
Sbjct: 384 LANDLGNLLNRTVSMINQYQDGQVAPVAAEQDEFAQDLIKTANETIAEYQKHMDALHFSQ 443

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K+   +  S V+    E +R +AIL+   + +   
Sbjct: 444 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 503

Query: 472 KIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +   N       F   D  +K    + +   PIFPR 
Sbjct: 504 KMFEQLGLDWNNEEQKKLEFGGFDWNVK----VTEKPTPIFPRL 543


>gi|331092546|ref|ZP_08341367.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400658|gb|EGG80264.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 631

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/479 (42%), Positives = 309/479 (64%), Gaps = 13/479 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   ENKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGV+ K FVD  +   +++AD+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG
Sbjct: 62  EEAGVSPKEFVDGVAAQVKEIADMMNTSYDKFIRTTDEYHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGRK-VQPAQEEAYFFKMSKYADRLIEHINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG   +F    WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L
Sbjct: 238 IGY--DCDGENNEFFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 296 QGDGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +   G   E D  + ++     + + E M    +  A+ ++
Sbjct: 356 LGNLVNRTISMTNKYFGGNVTDKGVTEEVDADLRAITENTPKAVDEKMDKLRVADAITEI 415

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +L    ++Y D   PW L K +   DR  TVLY  ++ I   A LL +F+P+ A KI 
Sbjct: 416 FNLFKRCNKYIDETMPWALAKEDDKKDRLETVLYNLIQSISAGAELLSSFMPETAEKIL 474


>gi|313891833|ref|ZP_07825438.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119827|gb|EFR43014.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 634

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/526 (41%), Positives = 326/526 (61%), Gaps = 28/526 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+A+ HIGH Y   +AD +ARF RLDG DV F  G+DEHGQKI +
Sbjct: 1   MSEKQAFYITTPIYYPSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AGVT   +VD+  + F+ +   L+IS DDFIRTTE+RH    + L++K  DKGDIY
Sbjct: 61  KATEAGVTPIEYVDKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFQKAYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           KG Y GWY +  E ++ + ++ +G   AD +         + + EE YFF++S Y D+ L
Sbjct: 121 KGKYEGWYCVPCETFWPESKLLEGNLCADCK------RECKRVSEEAYFFKMSKYADRWL 174

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            + E +P FI P  RRNE+I FVK+GL+DL +SR +F WGI +P DP++++YVW DALTN
Sbjct: 175 KFIEENPHFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTN 234

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  G  D+ +  K K+WPA++H++GK+I+RFH I WP  L+S ++ +PK+V+ HG+++
Sbjct: 235 YLTAVGIEDDKEKFK-KYWPANVHLVGKEIVRFHTIIWPIMLMSLDIEIPKQVYGHGWLV 293

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +GEK+SKS GNV+DPI +I E G DA+RY+L+ +I  G DG + +D L  R+N+DL+N 
Sbjct: 294 VEGEKMSKSKGNVVDPIPLIHEFGSDAIRYYLMNDIQLGSDGNFGRDRLINRINSDLSND 353

Query: 358 IGNLVSRSVSMILK-----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +GNL+ R++SM+ K      Y G I       ++  +I      VL+  +  M N  I+ 
Sbjct: 354 LGNLLYRTLSMVEKYRNGIVYKGDITGDKVIEDASLNIEKDLINVLENYKYGMNNWKIND 413

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V + V  +++Y D   PW L K  +  D    VLY   E +R ++I +   +P  A
Sbjct: 414 ALKSVWTYVRSLNKYIDITMPWTLAKDESKKDLLDAVLYHLCEGLRVVSIFVFPVIPIAA 473

Query: 471 NKIFDILFVADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510
            K+++ L + D    F+S+        + +    ++K   PIFPR 
Sbjct: 474 EKMWNQLGLKD----FKSVQLSDVIWGKFEENTKINKGL-PIFPRI 514


>gi|269120234|ref|YP_003308411.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614112|gb|ACZ08480.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 638

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/513 (42%), Positives = 321/513 (62%), Gaps = 11/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ST I YPNA+PH+G AY  IIADV AR+ RL G +V F+TG DEHGQKI +AA+ 
Sbjct: 3   KKFYVSTPIYYPNAKPHVGTAYTTIIADVTARYMRLKGYEVKFSTGLDEHGQKIQEAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             VT + +VD+ + NF+ +   L+IS  +FIRTTE+RH  + + + K++ + GDIYKG Y
Sbjct: 63  NNVTPQEWVDRMAENFKALWKKLNISNTEFIRTTEERHKISVKKMIKRVYENGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y + DE +  D+ V +G    +       V+   E  YFF+LS YQD+LL Y E +P
Sbjct: 123 KGLYCVSDETFVPDNSVLEGNKCPHCGKDLIEVK---ENSYFFKLSKYQDRLLKYIEENP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEV+SF+  GL+DLS+SR TF+WGI +  +  +++YVW DALTNY+T  G+
Sbjct: 180 DFILPSYRKNEVVSFINQGLQDLSISRTTFNWGIPLELEEGHVIYVWFDALTNYITVAGF 239

Query: 245 LDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            D+ +      W     +H++GKDILRFHAI WPA L+SA +PLP  V +HG+   +GEK
Sbjct: 240 GDD-EKKFEDIWIDGKVMHLMGKDILRFHAIIWPAMLMSAGIPLPDTVAAHGWWTVEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+E +E+ G+D  RY+L+RE+  G DG Y + G+ +R+NADLAN +GNL+
Sbjct: 299 MSKSKGNVVDPLEEVEKYGLDPFRYYLMREVTFGLDGDYSQKGMIQRINADLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K +D  +      T  +E I ++    +++I    +       L  V   +S
Sbjct: 359 NRTIGMQKKYFDSAVVLEKEETALEEEIYALWKTTVEDIDTYFEKVQFSEVLKAVWKFIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K   N  R STV+Y  VE + ++A+L+  F+P+ A K+++ L + 
Sbjct: 419 RMNKYIDETAPWILAKDPENKSRLSTVMYNLVESLYKIAVLISPFMPETAQKMWNQLGIN 478

Query: 481 DENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
           D     +  D +   + P   +     PIFPR 
Sbjct: 479 DSIENIRLDDIKHWGVYPVNNILGEATPIFPRI 511


>gi|315037467|ref|YP_004031035.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325955925|ref|YP_004286535.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312275600|gb|ADQ58240.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325332490|gb|ADZ06398.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327182760|gb|AEA31207.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 658

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/521 (40%), Positives = 325/521 (62%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRAQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT+++H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQQFVDKMADSYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P P A  +  + +    + V+ E RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGHVDPVPVAQDKFGKDLQDTAASVIDEYREYMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L++  ++Y D   PW L K+   +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDSIWKLIARANKYIDETTPWVLNKEGKKEELSHVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVA--DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +   DE++   S         ++ K   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQRGLSFGDFAWDTKVIEKP-KPIFPRL 520


>gi|229551470|ref|ZP_04440195.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258540783|ref|YP_003175282.1| methionyl-tRNA synthetase/protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
 gi|229315153|gb|EEN81126.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257152459|emb|CAR91431.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
          Length = 660

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/521 (40%), Positives = 322/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++ +LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K   G++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEGGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW+L K     D+  +V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 VQIFGQLGLDHENEDHKVVKWGALPAGAKVVEQGTPIFPRL 521


>gi|169830260|ref|YP_001716242.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637104|gb|ACA58610.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 516

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/512 (41%), Positives = 312/512 (60%), Gaps = 11/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+   HIGHAY  + AD +ARF RL G DV F TG+DEHGQKI + A 
Sbjct: 5   KPPFYITTPIYYPSDNLHIGHAYTTVAADTVARFKRLTGYDVYFLTGSDEHGQKIERTAA 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G   + +VD+    F+ +   L+I Y DFIRTTE RH      +++++ ++GDIYK  
Sbjct: 65  ARGKNPQEYVDEIVAGFKRLWSRLEIDYSDFIRTTEDRHKRVVTDIFRRLHEQGDIYKSS 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    EA++ D +V +G           PV+ + EE YFFR S Y ++LL++ + +
Sbjct: 125 YEGLYCTPCEAFWTDRQVVEGNCPDC----GRPVELVAEESYFFRQSRYAERLLAHIDRN 180

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNEV+SF+K GL+DL +SR TF+WGI +P DP++++YVW+DALTNY++   
Sbjct: 181 PDFIQPVSRRNEVVSFIKMGLEDLCVSRTTFNWGIPVPFDPRHVIYVWVDALTNYISALN 240

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    ++WP D+H++GKDI+RFH I WP  L++A +PLPK+V  HG+++ +  K+
Sbjct: 241 YGAEDDSLYRRYWPVDVHLVGKDIVRFHCIIWPIILMAAGIPLPKRVVGHGWLMLESGKM 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  +I+  GVDA+RY+L+RE+  G DG+Y +D L +R+N DLAN +GNL+S
Sbjct: 301 SKSKGNVVDPFVLIDRYGVDAIRYYLLREMLFGADGYYSEDNLIRRINVDLANDLGNLLS 360

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R+ +MI K  DG I  PG   +  D  ++ +      E+   +    +  AL  ++ LV 
Sbjct: 361 RTTAMIDKYLDGEIQAPGPADDPLDRELIDLALITPGEVAGLVNELDLSAALGAIMKLVG 420

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y +   PW L K      R + V+Y   E  R   +LL  F+P    +++  L +A
Sbjct: 421 RANKYIEETAPWTLAKDPAKKQRLAGVMYNLAESYRIATVLLSPFMPGFPARVWPQLGIA 480

Query: 481 D--ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
              E   ++SL   RL  G  + +   P+FPR
Sbjct: 481 GRPELHTWESLTWGRLPAGTRIARG-APLFPR 511


>gi|313906147|ref|ZP_07839496.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469034|gb|EFR64387.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 662

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/494 (42%), Positives = 317/494 (64%), Gaps = 15/494 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y++TAIAY + +PHIG+ YE+++AD +ARF R+ G +V F TGTDEHGQKI   A  
Sbjct: 7   ENYYMTTAIAYASGKPHIGNTYEIVLADSIARFRRMQGYNVFFQTGTDEHGQKIENKATE 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT K +VD  +   R + D+++ SYD FIRTT+  H    + ++KK+ DKGDIY G Y
Sbjct: 67  AGVTPKQYVDNTAGEIRRIWDLMNTSYDKFIRTTDDYHEAQVQKMFKKMFDKGDIYLGSY 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E+++ + ++    DG+  +     V    E  YFFR+S Y  KL+ +  SHP
Sbjct: 127 EGWYCTPCESFWTESQL---VDGKCPDCGRE-VTKANEPAYFFRMSKYAQKLIDHINSHP 182

Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +FI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  G
Sbjct: 183 DFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITGIG 242

Query: 244 YLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           Y  + DG+      KFWPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H +++  
Sbjct: 243 Y--DCDGNHTEQFGKFWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLIQA 300

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    D + +R+N+DLAN +G
Sbjct: 301 DGKMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDGVISWDLMVERMNSDLANTLG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   GA    D+ + +V +   Q++ + M++  +  A++++ +
Sbjct: 361 NLVNRTISMSNKYFGGVVENRGAAEPVDDELKAVVTSTAQKVEDKMKDLHVADAISEIFT 420

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW + K     DR +TV+Y  VE I   A LL+ ++P+   KI   L
Sbjct: 421 LFKRCNKYIDETTPWVIAKDEAKQDRLATVMYNLVESIIIGASLLRPYLPETTEKILAQL 480

Query: 478 FVADENRCFQSLDQ 491
              +  R ++ LDQ
Sbjct: 481 NAKE--RDYEVLDQ 492


>gi|306820842|ref|ZP_07454465.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551114|gb|EFM39082.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 655

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/513 (40%), Positives = 319/513 (62%), Gaps = 8/513 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  YI+T I YP+ + HIGH Y  +  D ++R+ R  G DV F TGTDEHG+KI K 
Sbjct: 13  QDKKTFYITTPIYYPSGKLHIGHTYTTVAVDAISRYKRFTGYDVRFLTGTDEHGEKIQKK 72

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G   K ++D    + + +   ++ISYDDFIRTT+KRH +  + ++K + DKGDIY 
Sbjct: 73  AEELGKKPKEYLDGMIDDIKALWAKMEISYDDFIRTTDKRHTEAVQKIFKTLYDKGDIYL 132

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G Y +  E+++ + ++    DG+  +  H  VQ  +E  YFFRLS YQD+L  YYE
Sbjct: 133 DEYEGKYCVPCESFWTESQL---VDGKCPDC-HREVQTRKESSYFFRLSKYQDRLKKYYE 188

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +P+F  P  R+ E+++ F+ +GL+DLS+SR TFDWGIK+P D ++++YVWIDAL+NY+T
Sbjct: 189 DNPDFCFPESRKKEMLTNFINAGLEDLSVSRSTFDWGIKVPFDEKHVIYVWIDALSNYIT 248

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + D    K+WPAD H++GK+I+RFH I WPA L++ +LPLPKKV+ HG+IL   
Sbjct: 249 ALGYDSDDDSLFKKYWPADFHIVGKEIMRFHTIIWPALLMALDLPLPKKVYGHGWILFGE 308

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN++ P  +IE  G+DAL+YFL+RE   G+DG Y       R+N+DLAN +GN
Sbjct: 309 DKMSKSKGNIVYPEPIIERYGIDALKYFLLREFTFGQDGNYTNSAFLNRINSDLANDLGN 368

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  +G+IP     T   + ++S   ++ + + + M       AL ++  +
Sbjct: 369 LLSRTVSMIEKYNNGIIPIISKKTAFHDDLVSTVEQMPELVDKAMNQMQFSIALEEIWKV 428

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW+L K  +  +    VLY   E +R + I++   +   A +IF  L 
Sbjct: 429 IRRANKYVDETMPWKLAKDESAKEELDCVLYDLAETLRIVTIMISPILHHTAKRIFAQLN 488

Query: 479 VADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             DE + +++  +  L P  +     + +FPR 
Sbjct: 489 TPDELKTYENGKKFGLTPANIKVGKSEILFPRL 521


>gi|227888942|ref|ZP_04006747.1| methionyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850530|gb|EEJ60616.1| methionyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 664

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/520 (40%), Positives = 324/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 7   MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++D+  +LD+SYD FIRTT++ H    + +++++  +GDIY
Sbjct: 67  KAEAQGIKPQEFVDKMADSYKDLWKMLDVSYDRFIRTTDEDHVKAVQKIFERLLKQGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 127 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 186

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 187 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 246

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 247 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 306

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 307 GWVLMRDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 366

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E  + ++   +  + E ++ M      +
Sbjct: 367 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 426

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K+   +  S V+    E +R +AIL+   + +   
Sbjct: 427 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMTNLAESLRLIAILIAPVMTQSPV 486

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  +N   + LD         + +   PIFPR 
Sbjct: 487 KMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 526


>gi|169351609|ref|ZP_02868547.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552]
 gi|169291831|gb|EDS73964.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552]
          Length = 638

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/498 (41%), Positives = 324/498 (65%), Gaps = 15/498 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAI Y + +PHIG+ YE+I+AD +ARF R +G +V F TGTDEHGQKI  
Sbjct: 1   MKNEKDYYLTTAITYTSGKPHIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + FVD+ +   + + D++D +YD F+RTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAKEAGIPPQQFVDEKAAEVKRIWDLMDTTYDRFMRTTDEYHKKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y    E+++ + ++    DG+  +    PV   +EE YFF+LS Y D+L+ + 
Sbjct: 121 LGHYEGKYCTACESFFTESQL---VDGKCPDCG-GPVNDAKEEAYFFKLSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HPEFI P+ R+NE+++ F+K GL+DL +SR +F W I +  DP++++YVWIDALTNY+
Sbjct: 177 EKHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      K+WPADLH+IGKDI+RFH IYWP  L++ ++PLPK+VF H +
Sbjct: 237 TGLGY--DVDGNHGELYKKYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GNVI   ++++  GVDA+RY+++ EI    DG    D L +++N+DLA
Sbjct: 295 LLQGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPYDNDGSITWDLLVEKINSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R++SM  K +DG++  P  +   DE ++++   + +++   M +     AL 
Sbjct: 355 NVLGNLVNRTISMSNKYFDGIVNNPKVYEPVDEELINIALEMPKKVINKMDDFKSSDALD 414

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + +L+   ++Y D   PW L K  +  +R +TVLY  +E IR  AI L  F+P  ANKI
Sbjct: 415 AIFTLLRRTNKYIDETMPWALAKDESKKERLATVLYNLIESIRFSAIALIPFIPSTANKI 474

Query: 474 FDILFVADENRCFQSLDQ 491
            D   +  + R +Q+L++
Sbjct: 475 LDQ--INTDQRDYQTLNE 490


>gi|282848951|ref|ZP_06258340.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581226|gb|EFB86620.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 648

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/515 (40%), Positives = 316/515 (61%), Gaps = 13/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY   DE ++ + ++  G +    +    PV+ ++EE YFF+L  Y D+ L + E +
Sbjct: 125 YEGWYCTPDETFWTEQKL--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I FV  GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRRNEMIQFVNQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V S +  
Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIGR 421

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L +
Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
                   +L+     G +   T     +PI+PRF
Sbjct: 482 TGFEAA--TLEDAKTWGLLATGTKVVKGEPIYPRF 514


>gi|116511600|ref|YP_808816.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107254|gb|ABJ72394.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 666

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/519 (41%), Positives = 320/519 (61%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +  + +++K+ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVQKIFEKLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +EV+K   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEVFKDEAGNVTGGIAPSGHEVEWVEEESYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL +YE++P FI P  R+NE+I+ F+K GL+DL++SR TF WGI +  +P++++YVW+D
Sbjct: 181 WLLDFYEANPTFIEPAIRKNEMINNFIKPGLEDLAVSRTTFTWGIPVKSNPKHVVYVWLD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  G+  + D    KFWP  ++++GK+I+RFH IYWP F  +  +  PK+VF+H
Sbjct: 241 ALFNYVTALGFYGDDDSLYKKFWPG-VNMVGKEIVRFHTIYWPIFCKALGIEPPKQVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A  + VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGSLLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + +E+   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDEESFSLENLAFGYSFTHPVVAKGQPIFPRL 518


>gi|282931725|ref|ZP_06337213.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205161|ref|ZP_06922557.1| methionine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|281304168|gb|EFA96282.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149739|gb|EFH30036.1| methionine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 662

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/523 (40%), Positives = 326/523 (62%), Gaps = 19/523 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G +  F TGTDEHG KI +
Sbjct: 1   MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYETFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  ++ ++++   LDISYD FIRT++  H    + +++K+  +GDIY
Sbjct: 61  KAEKAGIKPQEYVDGMAKQYKELWKKLDISYDKFIRTSDPEHVKAVQAIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EV+K  +G+         + VQ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HPEFILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLKYYQDHPEFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   +K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI +   G++  PG+  +   ++       + E ++ M      +A
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGLVSKPGSQDDLGNNLAKFADETIAEYQKQMDALHFSQA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  +   V   ++Y D   PW L K+   +  + V+    E +R +AI++   + +   +
Sbjct: 421 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAQ 480

Query: 473 IFDILFVADENRCFQSLDQR-LKPG-FMLH-KTFD---PIFPR 509
           IF+ L +      F+  DQ+ LK G F  + K  D   PIFPR
Sbjct: 481 IFEQLGL-----NFEEADQKALKFGEFAWNIKVTDKPAPIFPR 518


>gi|256851968|ref|ZP_05557355.1| methionyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661462|ref|ZP_05862375.1| methionyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615380|gb|EEU20570.1| methionyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547917|gb|EEX23894.1| methionyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 668

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/523 (40%), Positives = 326/523 (62%), Gaps = 19/523 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G +  F TGTDEHG KI +
Sbjct: 7   MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYETFFLTGTDEHGLKIEQ 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  ++ ++++   LDISYD FIRT++  H    + +++K+  +GDIY
Sbjct: 67  KAEKAGIKPQEYVDGMAKQYKELWKKLDISYDKFIRTSDPEHVKAVQAIFEKLLKQGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EV+K  +G+         + VQ ++E  YFFR+S Y D
Sbjct: 127 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 186

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HPEFILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 187 RLLKYYQDHPEFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 246

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 247 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 306

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   +K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 307 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 366

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI +   G++  PG+  +   ++       + E ++ M      +A
Sbjct: 367 LANDLGNLLNRTVSMINQYQAGLVSKPGSQDDLGNNLAKFADETIAEYQKQMDALHFSQA 426

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  +   V   ++Y D   PW L K+   +  + V+    E +R +AI++   + +   +
Sbjct: 427 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAQ 486

Query: 473 IFDILFVADENRCFQSLDQR-LKPG-FMLH-KTFD---PIFPR 509
           IF+ L +      F+  DQ+ LK G F  + K  D   PIFPR
Sbjct: 487 IFEQLGL-----NFEEADQKALKFGEFAWNIKVTDKPAPIFPR 524


>gi|257466511|ref|ZP_05630822.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917667|ref|ZP_07913907.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691542|gb|EFS28377.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 640

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/524 (42%), Positives = 315/524 (60%), Gaps = 37/524 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+G AY  I ADV++R+ +L G +V F TGTDEHGQK+ + A+  G
Sbjct: 4   FYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGKNVYFLTGTDEHGQKVEQTAKEKG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + + D+ +  F +M   L+I Y DFIRTTE+RH D+ + + K + +KGDIYKG Y G
Sbjct: 64  FTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEYEG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E ++ ++++ +        A H P     +  ++EE YFFR+S YQD LL + E
Sbjct: 124 QYCISCETFFPENQIVE--------AGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIE 175

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T 
Sbjct: 176 EHPDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITA 235

Query: 242 TGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           TGY +N       +W      H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +
Sbjct: 236 TGY-ENDSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSE 294

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  RVN+DLAN +G
Sbjct: 295 GEKMSKSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLG 354

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ M  K + G I   G + E + S+  +    L ++ ++M      RAL  +  
Sbjct: 355 NLLNRTLGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWK 414

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +S +++Y D   PW L K  T   R +TV+   VE + ++A+L+   +P+ A KI+  L
Sbjct: 415 FISRMNKYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQL 474

Query: 478 FVADENRCFQSLDQRLKPGFMLH--KTFD---------PIFPRF 510
            V  + +     + RL     LH   TF+         PIFPR 
Sbjct: 475 GVEKDIQ-----EARLSS---LHTWNTFEEKHTLGKATPIFPRI 510


>gi|268318773|ref|YP_003292429.1| hypothetical protein FI9785_278 [Lactobacillus johnsonii FI9785]
 gi|262397148|emb|CAX66162.1| metS [Lactobacillus johnsonii FI9785]
          Length = 658

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/520 (40%), Positives = 322/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++D+  +LD+SYD FIRTT+  H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDKMANSYKDLWKMLDVSYDRFIRTTDDDHVKAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDNDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E  + ++   +  + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K   +   + V+    E +R +AIL+   + +   
Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKNEELAKVMTNLAESLRLIAILIAPVMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           ++F+ L +  +N   + LD         + +   PIFPR 
Sbjct: 481 QMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 520


>gi|225575677|ref|ZP_03784287.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037134|gb|EEG47380.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM
           10507]
          Length = 660

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/481 (43%), Positives = 308/481 (64%), Gaps = 13/481 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI+TAIAY + +PHIG+ YE ++AD +ARF R +G DV F TGTDEHGQKI   AQ
Sbjct: 13  KEKYYITTAIAYTSGKPHIGNTYEAVLADAIARFKRQEGYDVFFQTGTDEHGQKIEMKAQ 72

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG 
Sbjct: 73  EAGVTPQKFVDGVASQIKSIWDLMNTSYDKFIRTTDDYHERQVQKIFKKLYEQGDIYKGH 132

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +    PV   +EE YFFR+S Y D+L+ +  +H
Sbjct: 133 YEGMYCTPCESFFTESQL---VDGKCPDCGR-PVTPAKEEAYFFRMSKYADRLIEHINTH 188

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP +++YVW+DALTNY+T  
Sbjct: 189 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWLDALTNYITGI 248

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG       K WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L 
Sbjct: 249 GY--DCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLLQ 306

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +
Sbjct: 307 GDGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTL 366

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K + G++   G     DE++ +    V +++   M    +  A+ +V 
Sbjct: 367 GNLVNRTISMSNKYFGGVVADKGVAEPVDEALKAFVLEVPKKVVAKMDELRVADAMTEVF 426

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           SL    ++Y D   PW L K  +  DR +TVLY  VE I   A LLQ+F+P    +I   
Sbjct: 427 SLFKRCNKYIDETMPWALAKDESKQDRLATVLYNLVEGICIGATLLQSFMPDTTGRILGQ 486

Query: 477 L 477
           L
Sbjct: 487 L 487


>gi|291521134|emb|CBK79427.1| methionyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 658

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/489 (43%), Positives = 320/489 (65%), Gaps = 11/489 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +ARF R+ G DV F TGTDEHGQKI   A  AG+
Sbjct: 7   YITTAIAYTSGKPHIGNTYEIVLADSIARFKRMQGYDVRFQTGTDEHGQKIEIKAGEAGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD  S   +++ D+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG Y G 
Sbjct: 67  TPKQFVDNVSGQIKEIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLHDQGDIYKGYYEGK 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     +   +EE YFF+LS Y D+L+ Y  +HPEFI
Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGREVID-AKEEAYFFKLSKYADRLIDYINTHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245
            P  R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  GY +
Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYITGLGYDV 242

Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D N D    K+WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L    K+S
Sbjct: 243 DGNSDELYKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPKQVFGHPWLLVGDGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI   +++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNLV+R
Sbjct: 303 KSKGNVIYADDLVNYFGVDAVRYFVLHEMPFDNDGSITWELMVERMNSDLANILGNLVNR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM  K + G+I  PG     D+ + +V   + +++   M+   +  A+ +V +L+   
Sbjct: 363 TISMNNKYFGGVISNPGVNEPVDDDLKAVALAMHEKVDAKMEKLRVADAITEVFTLLRRC 422

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW+L K  T  DR +TVLY  +E IR  A+ L A++P  + +I D+L    +
Sbjct: 423 NKYIDETEPWKLAKDETKQDRLATVLYNLMEGIRMAAVALAAYLPDTSARILDML--GTQ 480

Query: 483 NRCFQSLDQ 491
            R +  LDQ
Sbjct: 481 ERDYLKLDQ 489


>gi|239628933|ref|ZP_04671964.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519079|gb|EEQ58945.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 674

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/478 (43%), Positives = 309/478 (64%), Gaps = 13/478 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI + AQ
Sbjct: 6   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKREQGYDVFFQTGTDEHGQKIEEKAQ 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT K FVD+ +   R + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG 
Sbjct: 66  AAGVTPKEFVDKAAAEIRRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYDQGDIYKGY 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +     V+  +EE YFFR+S Y  +L+ +   H
Sbjct: 126 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYAPRLIEHINQH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVDFDPKHVTYVWLDALTNYITGI 241

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DGS      K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L 
Sbjct: 242 GY--DCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLLQ 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 300 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANIL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K +DG+I   GA  E DE +  V    +++    M+   +  A+ ++ 
Sbjct: 360 GNLVNRTISMSNKYFDGVIADKGAAGEVDEDLKKVVLEEVKKADAKMEQLRVADAMTEIF 419

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++    ++Y D   PW L K     DR STVLY   E I   A LL +F+P+ A KI 
Sbjct: 420 NIFRRCNKYIDETTPWTLAKDEAQKDRLSTVLYNLTESITIGASLLYSFMPETAGKIL 477


>gi|225571222|ref|ZP_03780220.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
           15053]
 gi|225160053|gb|EEG72672.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
           15053]
          Length = 630

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/480 (42%), Positives = 309/480 (64%), Gaps = 9/480 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   EKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSRGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD  +   R + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  EEAGVTPKEFVDGVAGEIRRIWDLMNTSYDKFIRTTDGYHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ +  S
Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIDHINS 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY    D ++   K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 238 IGYDCGGDNTEQFRKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G +   G   E+D  + ++     + +   M    +  A+ ++ +
Sbjct: 358 NLVNRTISMTNKYFGGTVTDKGVAGEADADLKAMTESAPKAVEGKMDELRVADAITEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY   E I+  A+LL+ F+P+ + KI   L
Sbjct: 418 LFKRCNKYIDETMPWALAKDEEKKDRLETVLYNLQESIKAGAVLLEPFMPETSGKILGQL 477


>gi|298245336|ref|ZP_06969142.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552817|gb|EFH86682.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 537

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/478 (42%), Positives = 297/478 (62%), Gaps = 10/478 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+TAI YPNA PH+GHA E +IAD+ AR+HRL G D  F+TG DE+   + +AA+ A
Sbjct: 25  RFYITTAIDYPNAAPHVGHALEKVIADIQARYHRLLGDDTFFSTGLDENSLHVLRAAREA 84

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    +V      FR+    LDISYD +IRTTE+ H      ++++   +GDIY+  YS
Sbjct: 85  NVEPHAWVAALEARFREEWRKLDISYDRWIRTTEEAHRKVAEEIFRRAWARGDIYRTTYS 144

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY      +Y D+++    DG   +      +W+ EE YFF LS Y+D+L +Y E HP+
Sbjct: 145 GWYCPNCNNFYKDEDL---RDGHCPDHPSISPEWLNEENYFFALSRYEDQLRTYIEEHPD 201

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTF----DWGIKIPDDPQYIMYVWIDALTNYLTT 241
           FI+P  RR EV+  +K GL+D S+SR+      +WGI +P+DPQ ++YVW DALTNYLTT
Sbjct: 202 FIVPTSRRAEVLGVIKQGLRDFSISRQVRPGLENWGIPVPEDPQQVLYVWFDALTNYLTT 261

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+L + +   A++WPAD HVIGKDI RFH +YWPA LLSA LPLP++V  HGFI  +G 
Sbjct: 262 IGFLQDEE-RFARYWPADAHVIGKDITRFHCLYWPAILLSAGLPLPRQVAVHGFITLEGR 320

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           + SKS GNVI P  +++ VG DALRY+L+R ++   DG + ++GL +  N +L N +GNL
Sbjct: 321 RFSKSSGNVIAPSALVDVVGSDALRYYLLRNLSLTADGNFTREGLLRAYNDELGNDLGNL 380

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R V +I +   G IP PG+ T  +E + ++ ++    +   ++     RAL +    V
Sbjct: 381 LQRLVVLIKRFRGGTIPRPGSVTPLEEEVQALVAQGGALVGRALEEWEPGRALEEAWRCV 440

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V+ Y +  +PW+L K     +R  TVLY   E +R L++ L  F+P  + ++ + L
Sbjct: 441 RRVNLYIEQSEPWKLAKQPGQEERLDTVLYTAAEALRLLSLWLAPFIPATSRRLREQL 498


>gi|256833172|ref|YP_003161899.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686703|gb|ACV09596.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 538

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/488 (43%), Positives = 300/488 (61%), Gaps = 13/488 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E    Y++T I Y N  PHIGHAY  + ADVL R+HR    DV F TGTDEHG+K+ + A
Sbjct: 4   ELTPFYLTTPIYYVNDAPHIGHAYTTVAADVLTRWHRQRQHDVWFLTGTDEHGEKVMRTA 63

Query: 63  QNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              GVT + + D+  + ++  + D +D   DDFIRTTE+RH    +    ++ D+GDIY+
Sbjct: 64  HANGVTPQQWADKLVKESWLPVLDTIDARNDDFIRTTEQRHERAVQKFISQLHDQGDIYQ 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
           G Y G Y +  E Y    E+  G    DGQ     H  PV+ + E+ +FF LS Y +KLL
Sbjct: 124 GSYEGPYCVGCEEYKLPSELLDGTGEFDGQKLCPLHGRPVEMLAEQNWFFNLSQYGEKLL 183

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           + YE HPEF+ P   RNEVI FVK GL+DLS+SR TFDWG+ +P DP ++MYVW DAL N
Sbjct: 184 ALYEEHPEFVQPASARNEVIGFVKQGLQDLSISRSTFDWGVPVPWDPTHVMYVWFDALLN 243

Query: 238 YLTTTGY-LDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           Y+T  G+  D+P   +   KFWPA +H++GKDILRFHA+ WPA L++A LPLP  VF+HG
Sbjct: 244 YITALGWGSDDPTAQERFDKFWPASVHLVGKDILRFHAVIWPAMLMAAGLPLPTTVFAHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L  GEK+SKS    I P ++I+  G DA RY+ +R I+ G+DG +  + +  + NA L
Sbjct: 304 WLLVGGEKMSKSKLTGIAPSDIIDHFGSDAFRYYFMRAISFGQDGSFSWEDMSAQYNAAL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           ANG GNL SR  +M+ K +DG +P  G  T+++  +  V +  +      +      RA+
Sbjct: 364 ANGWGNLASRLAAMVNKYFDGTLPQVGDLTDAEHHVHQVAATAVTNAEAAIDAISPTRAI 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKK----TNP-DRASTVLYVTVEVIRQLAILLQAFVPKL 469
             V +LV  ++ Y   Q+PW++ K    T P  R +T+L    E +R LA+LL   +P+ 
Sbjct: 424 EAVWTLVDALNMYITEQEPWKVAKDPEQTRPGGRLATILVTAAEGLRALAVLLNPVMPQA 483

Query: 470 ANKIFDIL 477
           A+K+++ L
Sbjct: 484 ASKLWESL 491


>gi|237737868|ref|ZP_04568349.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419748|gb|EEO34795.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 641

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/520 (41%), Positives = 313/520 (60%), Gaps = 29/520 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+G AY  I ADV+AR+ R  G D  F TGTDEHGQK+ + A+  G
Sbjct: 5   FYVTTPIYYVNGDPHVGSAYTTIAADVMARYKRTMGYDAYFLTGTDEHGQKVEETAKQKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + + D  +  F++M   L I Y DFIRTTE RH +  + + KK+ + GDIYKG YSG
Sbjct: 65  YTPQQWTDIMAPRFKEMWAKLGIEYSDFIRTTESRHKEAVKKILKKVYENGDIYKGEYSG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E +  ++++         N  H P     ++ ++EE YFF++S YQD LL + +
Sbjct: 125 KYCVSCETFVPENQIV--------NGNHCPDCGKELRVVKEESYFFKMSKYQDALLEHID 176

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP+FILP  RRNEV+SF+K GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT 
Sbjct: 177 KHPDFILPRSRRNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTA 236

Query: 242 TGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY +NP+    K+W     +H++GKDI+RFHAI WP  LLSA   LP KV +HG+   +
Sbjct: 237 VGYENNPEMFD-KYWNNAEVMHLLGKDIVRFHAIIWPCMLLSAGEKLPDKVVAHGWWTSE 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNV+DPI  IE+ GVDA RY L+RE+  G DG Y    +  R+N+DLAN +G
Sbjct: 296 GEKMSKSKGNVVDPISEIEKYGVDAFRYCLMREVQFGNDGDYSTKSVVTRINSDLANDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ M  K + G++       + D+ I ++ + V++E+ E M      +AL  +  
Sbjct: 356 NLLNRTLGMYKKYFGGVVVNGATRDKYDDEIETLWTEVVKEVEEQMNIVQYSKALEAIWK 415

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +S +++Y D   PW L K   N DR + V+   V+ + + A+++  ++P  A KI++ L
Sbjct: 416 FISRLNKYIDETAPWTLAKDEANRDRLAVVMNHLVDGLYKAAVMVYPYMPTSAQKIWNQL 475

Query: 478 FVADENRCFQSLD-------QRLKPGFMLHKTFDPIFPRF 510
               E R   +           L+ G +L    +PIFPR 
Sbjct: 476 ---GETRDIHTAKVEEVMGWNLLREGHVLGNA-EPIFPRL 511


>gi|117927385|ref|YP_871936.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647848|gb|ABK51950.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 539

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/529 (41%), Positives = 317/529 (59%), Gaps = 28/529 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGHAY  + ADVLAR+HR  G  V F TGTDEHGQK+ ++AQ 
Sbjct: 3   KTFYVTTPIYYVNDAPHIGHAYTTVAADVLARWHRQRGEPVWFLTGTDEHGQKVLRSAQA 62

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G + + + D+  +  ++     LDISYDDFIRTTE RH    +   +++ +KG+IY+G 
Sbjct: 63  GGASPQEWADRLVAEAWQPTWRELDISYDDFIRTTEPRHTGRVQAFLQRLYEKGEIYEGV 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y G Y +  E +    E+  G +G+Y   Q       PV  + E  YFFRLS Y D LL 
Sbjct: 123 YEGPYCVACEEFKLPGELVSG-EGEYAGQQVCPVHRRPVDQLSETNYFFRLSKYADALLD 181

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +Y +HPE + P   RNEV+ F++ GL+DLS+SR +FDWG+KIP D + ++YVW DAL NY
Sbjct: 182 HYAAHPEAVEPESARNEVMQFIRQGLQDLSISRSSFDWGVKIPWDDRQVVYVWFDALLNY 241

Query: 239 LTTTGYLDNPDGS-KAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           +T  GY D PD + +A+F   WPAD+H++GKDILRFHA+ WPA LL+  LPLP+KVF+HG
Sbjct: 242 ITAIGY-DAPDETMRARFASTWPADVHLVGKDILRFHAVIWPAMLLAGGLPLPRKVFAHG 300

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L  GEK+SK+    I P ++    G DA RY+ +R    G+D  +  + +  R  A+L
Sbjct: 301 WLLVSGEKMSKTRLTGIAPTQLTAHFGSDAFRYYFLRSFPFGQDASFSWEEMSARYTAEL 360

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           ANG+GNL SR  +M  + +DG++P PG  T +++ +  V + V+ +    M       AL
Sbjct: 361 ANGLGNLASRVTAMTGRYFDGVLPVPGEVTAAEQRVADVLAAVVPDADAAMDRLDFFTAL 420

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A++  LV  ++ Y   Q+PW+L K +      R +TVLY   + +R LA+LL A +P+  
Sbjct: 421 ARIWDLVLVLNGYLTEQQPWQLAKQDDGEARIRLATVLYTAADGLRALAVLLNAVMPRAC 480

Query: 471 NKIFDILFVADENRCFQSLDQR---------LKPGFMLHKTFDPIFPRF 510
           +++++ L    E        QR         L  G  L K  DP+FPR 
Sbjct: 481 SRLWEQL--GAEATLGPLGSQRISDTARFGVLPAGSRLTKR-DPLFPRL 526


>gi|238852847|ref|ZP_04643252.1| methionine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852547|ref|ZP_06261889.1| methionine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311111303|ref|ZP_07712700.1| methionine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|238834541|gb|EEQ26773.1| methionine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556289|gb|EFB61909.1| methionine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066457|gb|EFQ46797.1| methionine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 658

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/524 (39%), Positives = 324/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIFYPSGKLTIGNAYTAIAADAMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++++  +LD+SYD FIRTT++ H    + +++K+  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  + +  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMRDGKMSKSKGNAVYPEMIAKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E  + ++      + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGYVAPVAADQDEFAQDLIKTAKETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K+   +  S V+    E +R +AIL+   + +   
Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 480

Query: 472 KIFDILFV-----ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +     A +   F + D  +K    + +   PIFPR 
Sbjct: 481 KMFNQLGLDWNKEAQKKLEFGAFDWDIK----VTEKPTPIFPRL 520


>gi|304386413|ref|ZP_07368746.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327770|gb|EFL94997.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 675

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/524 (40%), Positives = 325/524 (62%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIG++Y  I  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 2   MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIEQ 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T + +VD  ++  +++  +L+IS D FIRTT++ H  + + +++K+ D+GDIY
Sbjct: 62  KAEALHTTPQAYVDDMAKGIKELWKLLEISNDKFIRTTDEAHEKSVQYIFQKLLDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    N V+ ++EE YFF++S Y D
Sbjct: 122 LGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYAD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YYE HP+FI P  R +E+I+ F+K GL+DL+++R +F WG+ + +DP++++YVWID
Sbjct: 182 WLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWID 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    ++WPA++H++GK+I+RFH IYWP  L +  L +PK+++ H
Sbjct: 242 ALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYGH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K +K+SKS GNVI P  ++E+ G+DALRY+L++ +    DG +  +    ++N D
Sbjct: 302 GWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G+IPT      E D  +  V +  ++  +E M++     
Sbjct: 362 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLEKVAAETIKNYQELMESMHFSD 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVP 467
           ALA+V  LVS  ++Y D   PW L + N D AS     +V+    E +R +AIL+Q  + 
Sbjct: 422 ALAEVWKLVSRSNKYIDETTPWILAR-NDDEASKQKLASVMNHLAESLRIIAILIQPVMT 480

Query: 468 KLANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +   KIF  L +       Q L    +  G  + +   PIFPR 
Sbjct: 481 QSPAKIFGQLGLDPATMELQGLHFGEIPAGTKVVEKGTPIFPRL 524


>gi|238019596|ref|ZP_04600022.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748]
 gi|237863794|gb|EEP65084.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748]
          Length = 648

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/515 (40%), Positives = 314/515 (60%), Gaps = 13/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 5   KKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +       F+ + + + IS DDF+RTTEKRH    + L+ K  +KGDIYK  
Sbjct: 65  AQGITPLEYTTNIVNGFKALWEKMHISNDDFLRTTEKRHEKVVQELFTKAYEKGDIYKAE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E ++ + ++    +         PV+ ++EE YFF+L+ Y D+ L + E +
Sbjct: 125 YEGWYCTPCETFWTEQKL---GENHTCPDCGRPVEKVKEESYFFKLAKYTDQWLKFIEEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  R NE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++   
Sbjct: 182 PDFIQPESRCNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALS 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+
Sbjct: 242 PFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++
Sbjct: 302 SKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLN 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V + +  
Sbjct: 362 RTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKSVWAFIGR 421

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D   PW L K+    +  R  + +Y   E +R +AI++   +P  A KI+D L +
Sbjct: 422 MNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAIIVSPVIPVGAPKIWDQLGL 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKT----FDPIFPRF 510
                   +L+     G +   T     DPI+PRF
Sbjct: 482 VGFTDA--TLEDAKVWGLIPTGTKVVKGDPIYPRF 514


>gi|184154662|ref|YP_001843002.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183226006|dbj|BAG26522.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 666

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/520 (40%), Positives = 319/520 (61%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H  T + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEATVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K   G ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509
            +I   L +A E      L     P   ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|227532988|ref|ZP_03963037.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189389|gb|EEI69456.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 660

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/521 (40%), Positives = 318/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ H +F+ P  R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHLDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALYQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +     P G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521


>gi|116628880|ref|YP_814052.1| methionyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094462|gb|ABJ59614.1| methionyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 681

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/524 (39%), Positives = 324/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 24  MAEKKTFYITTPIFYPSGKLTIGNAYTAIAADAMTRYKKSRGFDTFFLTGTDEHGLKIEQ 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++++  +LD+SYD FIRTT++ H    + +++K+  +GDIY
Sbjct: 84  KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 143

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 144 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 203

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 204 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 263

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 264 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 323

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  + +  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 324 GWVLMRDGKMSKSKGNAVYPEMIAKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 383

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E  + ++      + E ++ M      +
Sbjct: 384 LANDLGNLLNRTVSMINQYQDGYVAPVAADQDEFAQDLIKTAKETIAEYQKQMDALHFSQ 443

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K+   +  S V+    E +R +AIL+   + +   
Sbjct: 444 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 503

Query: 472 KIFDILFV-----ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +     A +   F + D  +K    + +   PIFPR 
Sbjct: 504 KMFNQLGLDWNKEAQKKLEFGAFDWDIK----VTEKPTPIFPRL 543


>gi|291562908|emb|CBL41724.1| methionyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 658

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/492 (43%), Positives = 311/492 (63%), Gaps = 11/492 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YISTAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 6   KKPYYISTAIAYTSGKPHIGNTYEIVLADAIARYKREQGYDVYFQTGTDEHGQKIELKAA 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +AGVT K FVD  +   +++ D+++ SY+ FIRTT+  H    + ++KK+ D+GDIYKG 
Sbjct: 66  DAGVTPKEFVDGVAGQIKEIWDLMNTSYNKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGH 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   +V    DG+  +    PVQ  +EE YFFR+S Y  KL+ Y   H
Sbjct: 126 YEGLYCTPCESFWTPSQV---VDGKCPDCGR-PVQPAKEEAYFFRMSKYAPKLIEYINEH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVTFDPKHVTYVWLDALTNYITGI 241

Query: 243 GYL--DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY    N D    K+WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L   
Sbjct: 242 GYDCDGNSDEKFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    D + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWDLMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R+VSM  K + G++   GA    DE + +     ++++ E M    +  A+ ++ ++
Sbjct: 362 LVNRTVSMTNKYFGGIVENKGAAEPVDEELKATVLETVKKVDEKMNKLRVADAITEIFNI 421

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ + KI   L 
Sbjct: 422 FRRSNKYIDETTPWTLAKDEAKKDRLATVLYNLTEAITIGASLLFSFMPETSEKILAQL- 480

Query: 479 VADENRCFQSLD 490
              E R  ++++
Sbjct: 481 -NTEKRSLENMN 491


>gi|257452653|ref|ZP_05617952.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059192|ref|ZP_07923677.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684868|gb|EFS21703.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 640

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/519 (42%), Positives = 313/519 (60%), Gaps = 27/519 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+G AY  I ADV++R+ +L G +V F TGTDEHGQK+ + A+  G
Sbjct: 4   FYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGNNVYFLTGTDEHGQKVEQTAKEKG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + + D+ +  F +M   L+I Y DFIRTTE+RH D+ + + K + +KGDIYKG Y G
Sbjct: 64  FTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEYEG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E ++ ++++ +         + + V+   EE YFFR+S YQD LL + E HP+F
Sbjct: 124 QYCISCETFFPENQIVEPGHCPDCGKKLSTVK---EESYFFRMSKYQDALLKHIEEHPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           ILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T TGY +
Sbjct: 181 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGY-E 239

Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           N       +W      H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+S
Sbjct: 240 NDSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  RVN+DLAN +GNL++R
Sbjct: 300 KSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLGNLLNR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K + G I   G + E + S+  +    L ++ ++M      RAL  +   +S +
Sbjct: 360 TLGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWKFISRM 419

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K  T   R +TV+   VE + ++A+L+   +P+ A KI+  L V  +
Sbjct: 420 NKYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQLGVEKD 479

Query: 483 NRCFQSLDQRLKPGFMLH--KTFD---------PIFPRF 510
            +     + RL     LH   TF+         PIFPR 
Sbjct: 480 IQ-----EARLSS---LHTWNTFEEKHTLGKATPIFPRI 510


>gi|256848351|ref|ZP_05553794.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714949|gb|EEU29927.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 674

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/513 (41%), Positives = 314/513 (61%), Gaps = 11/513 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + A+  G+
Sbjct: 9   YITTPIYYPSGKLHIGNSYTTIACDAEARFKRLTGYDVFYLTGTDEHGLKIEQKAEQLGM 68

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + +VDQ +   + +   LDI+ D FIRTT+  H    + +++++ D+GDIYKG Y+GW
Sbjct: 69  KPQEYVDQMATGIKKLWKTLDITNDKFIRTTDDYHERAVQKIFQQLLDQGDIYKGKYTGW 128

Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           YS+ DE Y+ +    EVY+  +G+    +    + VQ +EEE YFF++S Y D L+ YY+
Sbjct: 129 YSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVEEESYFFKMSKYADWLMDYYK 188

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            HP+FI P  R NE+++ F+K GL+DL+++R +F+WG+K+P+DP++++YVWIDAL+NY+T
Sbjct: 189 EHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSNYIT 248

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + +    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG++  K 
Sbjct: 249 ALGYGSDDNRLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGWLTMKD 308

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI P  ++E  G+DA RY+L+R +  G DG +  +    +VN DLAN +GN
Sbjct: 309 GKMSKSKGNVIYPQTLVERYGLDATRYYLLRAMPFGNDGIFSPEDFVDKVNFDLANDLGN 368

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R+V+MI K   G +  T  A T  D+ +    + VL E  + M       ALA V  
Sbjct: 369 LLNRTVAMINKYQGGQVQGTNTAMTPYDQDLEQTAADVLAEYSDLMDQCHFAEALASVWK 428

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+S V++Y D  +PW L K    +A  S V+    + +R +A LLQ  +P    +I   L
Sbjct: 429 LISRVNKYIDETEPWVLAKDEDKKAELSDVMTHLAKALRFIAALLQPTMPNAPKEILQQL 488

Query: 478 FVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
            +AD       L          + K   PIFPR
Sbjct: 489 GLADTEITLNDLSFNDFPTAATVVKKGTPIFPR 521


>gi|153811133|ref|ZP_01963801.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
 gi|149832631|gb|EDM87715.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
          Length = 652

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/477 (43%), Positives = 309/477 (64%), Gaps = 9/477 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI   A
Sbjct: 2   DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+  KGDIYKG
Sbjct: 62  EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    P    +EE YFF++S Y D+L+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADRLIDYINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S+   K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGESSEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     DE + +    V  ++ E M    +  A+ +V +
Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVVEPVDEDLKAFALAVPGKVAEKMDKLRVADAMTEVFT 417

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           L   +++Y D   PW L K     DR +TVLY  VE I   A LL++F+P+   +I 
Sbjct: 418 LFKRLNKYIDETMPWALAKDEAKKDRLATVLYNLVEGITMGATLLESFMPETTERIL 474


>gi|225016542|ref|ZP_03705734.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum
           DSM 5476]
 gi|224950651|gb|EEG31860.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum
           DSM 5476]
          Length = 669

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/487 (41%), Positives = 312/487 (64%), Gaps = 13/487 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y++TAIAY + +PHIG+ YE++ AD +ARF R+ G DV F TGTDEHGQK+   A+
Sbjct: 22  KEKFYLTTAIAYASRKPHIGNTYEIVFADAVARFKRMQGYDVHFVTGTDEHGQKVEDLAK 81

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G++ K +VD  +   + + D++D +YD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 82  ESGISPKQYVDSVAGEIKTIWDLMDSTYDTFIRTTDDYHERVVQKIFKKLYDQGDIYKSE 141

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++ + ++    DG+  +     V   +EE YFF++S YQD+L+ Y E H
Sbjct: 142 YQGLYCVPCESFFTETQL---VDGKCPDCGREVVP-TKEEAYFFKMSKYQDRLMEYIEQH 197

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R NE++ +F+K GL+DL +SR +F WG+++  DP++++YVW+DAL NY+T  
Sbjct: 198 PDFIQPKSRENEMVNNFLKPGLQDLCVSRTSFTWGVQVDFDPKHVVYVWLDALVNYITAI 257

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY  +P+GS   F   WPADLH+IGKDILRFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 258 GY--DPEGSSELFEKEWPADLHIIGKDILRFHTIYWPIFLMALDLPLPKQIFGHPWLLSG 315

Query: 300 GEKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            +K+SKS+GNVI   +++ + G VDA+R++L+  +   +DG    + +  R N++LAN +
Sbjct: 316 QDKMSKSVGNVIYADDLVRQFGSVDAVRFYLLSAMPYAQDGSITYENVISRFNSELANTL 375

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R+V+M+ K +DG IP P A    DE + S+    + +    M       A+  V+
Sbjct: 376 GNLVNRTVTMVGKYFDGAIPAPTAKAPLDEELSSMAKETVAKFDGQMNALKTSDAIDTVM 435

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +     ++Y D   PW L K     +R  TVLY  +E IR +A+LL  F+P  A +I   
Sbjct: 436 AFARRCNKYIDETMPWALAKDEAETERLGTVLYNLLEGIRFIAVLLTPFMPTTAEEILTQ 495

Query: 477 LFVADEN 483
           +   D +
Sbjct: 496 INAPDSD 502


>gi|76799721|ref|ZP_00781816.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76584925|gb|EAO61588.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 475

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/475 (42%), Positives = 312/475 (65%), Gaps = 10/475 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S+  KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAF 465
           AL  V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPF 475


>gi|289422845|ref|ZP_06424678.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156755|gb|EFD05387.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 647

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/518 (40%), Positives = 328/518 (63%), Gaps = 13/518 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   Y++T I YP+ + HIGHAY  I AD +ARF R  G DV F TGTDEHG+KI K
Sbjct: 1   MTKKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK-RHHDTCRILWKKISDKGDI 119
            AQ AG++   F+D    + + + + L+IS DDFIRTT+K RH    + ++ K+ ++GDI
Sbjct: 61  KAQEAGMSEIEFLDAQIADIKKLWEKLEISNDDFIRTTDKERHEVIIQKIFTKLYEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y +  E+++ + ++    DG          + ++EE YFFRLS YQD++   
Sbjct: 121 YKGSYEGNYCVPCESFWTESQM---IDGHKCPDCGRETKIVKEESYFFRLSKYQDRIRDL 177

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +E + +F+LP  R+NE+I +F+  GL+DLS++R +FDWGIK+P D  +++YVWIDAL NY
Sbjct: 178 FE-NTDFVLPESRKNEMIKNFIDPGLEDLSVTRTSFDWGIKVPFDEDHVIYVWIDALCNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GY+   D     +WPA++ ++ K+I+RFH I WPA L++ +LPLP++VF HG+IL 
Sbjct: 237 ITSLGYMSEDDSKFKNYWPANVQLVAKEIVRFHTIIWPALLMALDLPLPQRVFGHGWILF 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GN++ P +++++ GVDAL+YFL+RE + G+DG Y       R+N+DLAN +
Sbjct: 297 ADDKMSKSKGNIVYPGQMVDKYGVDALKYFLLREFSFGQDGSYTHRNFITRINSDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSR+VSM+ K  DG++    A TE D+ ++++   +  +  + M + + H AL  V 
Sbjct: 357 GNLVSRTVSMVEKYNDGILVVNDAKTEFDDELINLYKEIRVDFEKQMNDLMFHEALESVW 416

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V   ++Y D   PW L K  +  D+ + VLY   E IR ++ L+ + +P  A KIF  
Sbjct: 417 RFVRRTNKYIDETMPWALAKDDSKKDQLNHVLYNLCESIRLISTLISSLLPDTARKIFYQ 476

Query: 477 LFVA--DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           L +   +E   ++S D    +  G  +H+  + +FPR 
Sbjct: 477 LGIEGFEELTNWESTDTFGLIADGTKVHRG-EVLFPRL 513


>gi|293399763|ref|ZP_06643909.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306163|gb|EFE47406.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 656

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/517 (41%), Positives = 328/517 (63%), Gaps = 17/517 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI+TAI Y + +PHIG+ YE+++ D +AR+ R  G DV F TGTDEHGQKI + A
Sbjct: 6   KKGKYYITTAITYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKA 65

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD+ +   R   D+++ SYD F+RTT++ H    + ++KK+ ++GDIYKG
Sbjct: 66  KEAGVTPKEFVDKVADIVRKNFDMMNTSYDYFVRTTDEGHERQVQKIFKKLYEQGDIYKG 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    PVQ   EE YFF L  Y  KL+ + E 
Sbjct: 126 KYEGMYCTPCESFWTESQL---IDGKCPDCGR-PVQKATEEAYFFNLQKYAPKLIKHIEE 181

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+I+ F+K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T+
Sbjct: 182 HPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITS 241

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG+      K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L
Sbjct: 242 LGY--DADGNHGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLL 299

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +R+N+DLAN 
Sbjct: 300 VGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERINSDLANV 359

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K ++G+I  P    + D+ ++ +     + + + M+   +  A+ ++
Sbjct: 360 LGNLVNRTISMQNKYFNGVISNPLECEDIDKELIDLALDTPKRVAKKMETLHVGDAIEEI 419

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L+   ++Y D   PW L K  +  DR +TVLY  +E IR  A+LL +F+P+ A KI D
Sbjct: 420 FTLLKRCNKYIDETTPWVLGKDESKKDRLATVLYNLLESIRIAAVLLSSFMPETAEKILD 479

Query: 476 ILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            L  ++  R  +SL++   L+ G  +    + +F R 
Sbjct: 480 ELSTSE--RSAESLEEFGNLECGHTVDAKPEILFARI 514


>gi|33303707|gb|AAP22261.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 418

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/418 (45%), Positives = 289/418 (69%), Gaps = 10/418 (2%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   +T + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +  
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
             D + +G     G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRK 179

Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +   
Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKY 239

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+D
Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K 
Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359

Query: 373 YDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++G IP      TE DE++++     L+++ E M+N     AL  +  LVS  ++Y D
Sbjct: 360 FNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKYID 417


>gi|270290915|ref|ZP_06197139.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280975|gb|EFA26809.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 675

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/523 (39%), Positives = 325/523 (62%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIG++Y  I  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 2   MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIEQ 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T + +VD  ++  +++  +L+IS D FIRTT++ H  + + +++K+ D+GDIY
Sbjct: 62  KAEALHTTPQAYVDDMAKGIKELWKLLEISNDKFIRTTDEAHEKSVQYIFQKLLDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    N V+ ++EE YFF++S Y D
Sbjct: 122 LGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYAD 181

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YYE HP+FI P  R +E+I+ F+K GL+DL+++R +F WG+ + +DP++++YVWID
Sbjct: 182 WLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWID 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    ++WPA++H++GK+I+RFH IYWP  L +  L +PK+++ H
Sbjct: 242 ALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYGH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K +K+SKS GNVI P  ++E+ G+DALRY+L++ +    DG +  +    ++N D
Sbjct: 302 GWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G+IPT      E D  +  V +  ++  +E M++     
Sbjct: 362 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLEKVAAETIKNYQELMESMHFSD 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPK 468
           ALA+V  LVS  ++Y D   PW L + + + +    ++V+    E +R +AIL+Q  + +
Sbjct: 422 ALAEVWKLVSRSNKYIDETTPWILARNDDEESKQKLASVMNHLAESLRIIAILIQPVMTQ 481

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              KIF  L +       Q L    +  G  + +   PIFPR 
Sbjct: 482 SPAKIFGQLGLDPATMELQGLHFGEIPAGTKVVEKGTPIFPRL 524


>gi|319936629|ref|ZP_08011042.1| methionine-tRNA ligase [Coprobacillus sp. 29_1]
 gi|319808186|gb|EFW04751.1| methionine-tRNA ligase [Coprobacillus sp. 29_1]
          Length = 640

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/482 (42%), Positives = 316/482 (65%), Gaps = 13/482 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAI Y + +PHIG+ YE+I+AD +AR  R +G +V F TGTDEHGQKI  
Sbjct: 1   MKNPKDYYLTTAITYTSGKPHIGNTYEIILADAIARSKRQEGYNVYFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG+  K FVD+ +   +++ D++D SYD F+RTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAQEAGIPPKQFVDEKAAVVKNIWDLMDSSYDKFMRTTDEYHIKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y    E+++ + ++    DG+  +    PV   +EE YFF+LS Y D+L+ + 
Sbjct: 121 LGHYEGKYCTACESFFTESQL---VDGKCPDC-GGPVHDAKEEAYFFKLSKYADRLIQHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E+HPEFI P+ R+NE+++ F+K GL+DL +SR TF W I +  DP++++YVWIDALTNY+
Sbjct: 177 ENHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTTFTWSIPVDFDPKHVVYVWIDALTNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      ++WPADLH+IGKDI+RFH IYWP  L++ ++PLPK+VF H +
Sbjct: 237 TGLGY--DVDGNHGELYKRYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GNVI   ++++  GVDA+RY+++ EI    DG    D L +R+N+DLA
Sbjct: 295 LLQGESKMSKSKGNVIYADDLVQIFGVDAVRYYVLHEIPYDNDGSITWDLLVERINSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLV+R+++M  K +DG++  P  + E D+ +  +   + +++++ M      +AL 
Sbjct: 355 NILGNLVNRTIAMTNKYFDGVVTNPEVYEEVDDELKQIALAMPKKVQDLMDEFKASKALD 414

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++  L+   ++Y D   PW L K     +R +TVLY  +E IR  AI L+ F+P  + KI
Sbjct: 415 EIFVLLRRTNKYIDDTMPWALAKETDKQERLATVLYNLIEAIRFAAIALEPFMPSTSTKI 474

Query: 474 FD 475
            D
Sbjct: 475 LD 476


>gi|315651952|ref|ZP_07904954.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485781|gb|EFU76161.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 652

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/522 (41%), Positives = 321/522 (61%), Gaps = 32/522 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +ARF R +GL+V F TGTDEHGQKI   A++AG+
Sbjct: 7   YITTAIAYASGKPHIGNTYEIVLADAIARFRREEGLEVFFQTGTDEHGQKIENKAKDAGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD  +   R + D+++ SYD FIRTT++ H    + ++KK  D+GDIYKGCY G 
Sbjct: 67  TPKEYVDNAAGQIRKIWDLMNTSYDKFIRTTDEDHKKQVQKIFKKFYDQGDIYKGCYEGM 126

Query: 128 YSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y    E+++ D ++  G      G  Y A+        EE YFF++S Y D+L+ Y   H
Sbjct: 127 YCTACESFFTDSQLVDGKCPDCGGDVYPAK--------EEAYFFKMSKYADRLIKYINEH 178

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE++ +F+  GL+DL +SR +F WGI +  DP+++ YVW+DAL+NY+T  
Sbjct: 179 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVEFDPKHVTYVWLDALSNYITGI 238

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG+ +    +FWPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L 
Sbjct: 239 GY--DVDGNSSERFKRFWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI    +++  GVDA+RYF++ E+    DG    + + +R N+DLAN +
Sbjct: 297 GDGKMSKSKGNVIYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERFNSDLANVL 356

Query: 359 GNLVSRSVSMILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           GNLVSR++SM  K +DG++         GA  E D  +  V    ++++   M    +  
Sbjct: 357 GNLVSRTISMTNKYFDGVLTDTKDESVAGAM-EVDTDLKDVALMTVEKVVRKMSELRVAD 415

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A++++ +L    ++Y D   PW L K      R  TVLY   E I   A LL +F+P+ +
Sbjct: 416 AISEIWTLFKRCNKYIDETTPWILAKEEDKKSRLQTVLYNLAESISIGATLLYSFMPETS 475

Query: 471 NKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            KI +  +     R  + +++   L  G  L K  + +F R 
Sbjct: 476 EKILE--YFGTNKRSLEDMNKFGLLMSGTTLAKDPEILFKRL 515


>gi|302672159|ref|YP_003832119.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
 gi|302396632|gb|ADL35537.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
          Length = 679

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/497 (43%), Positives = 312/497 (62%), Gaps = 12/497 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ + K YI+TAIAY + +PHIG++YE+++AD +AR+ R DG DV F TG+DEHGQKI  
Sbjct: 1   MQNKGKYYITTAIAYTSGKPHIGNSYEIVLADAIARYKRRDGFDVHFQTGSDEHGQKIET 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A  AG  + K FVDQ S   + + +++D SYD FIRTT+  H    + ++K+  D+GDI
Sbjct: 61  RAIEAGCASPKEFVDQVSDTIKGLWNLMDTSYDRFIRTTDDDHVKQVQKIFKRFYDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y    EA+Y + ++  G   +       PV   EEE YFF++S Y DKL+ Y
Sbjct: 121 YKGSYKGMYCTECEAFYTESQLKDGKCPEC----GGPVHPAEEEAYFFKMSKYADKLIDY 176

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DAL+NY
Sbjct: 177 INTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNY 236

Query: 239 LTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           +T  GY      S+   K+WPADLH+IGKDI+RFH IYWP FL++   PLPK++F H ++
Sbjct: 237 ITGIGYDAEGHSSEEYKKWWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQIFGHPWL 296

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  GEK+SKS GNVI   +++   GVD +RYF++ E+    DG    + L +R N+DLAN
Sbjct: 297 LQGGEKMSKSKGNVIYADDLVSLFGVDPVRYFVLHEMPFENDGVITWELLVERFNSDLAN 356

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNLV+R+++M  K   G++   G   + D  + +V +    ++ + M    +  AL +
Sbjct: 357 TLGNLVNRTIAMSNKYLGGVVADKGVTEDVDADLKAVVTSCYDKVEKKMDELRVADALTE 416

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +L    ++Y D  +PW L K  +  DR STVLY  VE I   A LL  F+P+ A KI 
Sbjct: 417 IFTLFKRCNKYIDETEPWVLGKDESKKDRLSTVLYNLVESISIGAALLDPFMPETAQKIR 476

Query: 475 DILFVADENRCFQSLDQ 491
           + L   +  R F SL Q
Sbjct: 477 EQLNAPE--REFDSLGQ 491


>gi|86606068|ref|YP_474831.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554610|gb|ABC99568.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 516

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/470 (42%), Positives = 291/470 (61%), Gaps = 7/470 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y NA PHIG AY  + AD +AR+HRL G DVL  TGTDEHGQKI + A+  G+ 
Sbjct: 8   ITTPIYYVNAAPHIGSAYTTLAADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEERGLP 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  F  +  +LDI YD FIRTT+ RH    R  ++++ D+GDI+ G   GWY
Sbjct: 68  PQQHCDEIAAQFAQLWQLLDIRYDRFIRTTDPRHKAIVREFFQRVWDRGDIFVGRQQGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + ++ E+ +G     +   +  V+W +EE YFFRLS YQ+KL + Y  HPEFI 
Sbjct: 128 CVACEEFKDESELLEGGFCPLH--PNKKVEWKDEENYFFRLSRYQEKLEALYAEHPEFIQ 185

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247
           P  RRNEVI+FVK GL+D S+SR +  WGI  P DP   +YVW DAL NYL+      D 
Sbjct: 186 PESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPSQTLYVWFDALINYLSAAVDPEDE 245

Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           P    A  ++WPAD+H++GKDI+RFHAIYWPA L+SA LPLP+++F HGF+   G K+ K
Sbjct: 246 PTLENALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAGLPLPRQIFGHGFLTKDGLKMGK 305

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN +DP E+++  G DA+RY+ + EI  GKDG + +    + +NADLAN +GNL++R+
Sbjct: 306 SLGNTLDPFELVQRYGADAVRYYFLTEIELGKDGDFSEGRFIEVLNADLANDLGNLLNRT 365

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++M LK Y      P     +D  + ++  R+   + +  +      A  + +SL    +
Sbjct: 366 LNM-LKKYQPDYRIPAVEIPADHPLKTLAERLAPTVADAYERLDPSSAARKALSLAQASN 424

Query: 426 RYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +Y D Q PW L K+   ++ + +LY  +E +R +A+ L   +P L+ KI 
Sbjct: 425 KYLDEQAPWTLHKQGQSEQVAQILYAVLESVRWVAVALSPIIPNLSLKIL 474


>gi|257463198|ref|ZP_05627597.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060786|ref|ZP_07925271.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686462|gb|EFS23297.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 646

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/516 (41%), Positives = 315/516 (61%), Gaps = 16/516 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+G AY  I +DV+AR+ +L G  V F TGTDEHGQK+ + A   G
Sbjct: 4   FYVTTPIYYVNGDPHVGSAYTTIASDVMARYQKLAGKTVYFLTGTDEHGQKVEQTAHEKG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + + D+ +  F +M   L+I Y DFIRTTE RH +  + + K + DKGDIYKG Y G
Sbjct: 64  FTPQAWTDKMAPAFTEMWKALNIKYSDFIRTTEPRHKNAVKKILKAVYDKGDIYKGEYEG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E ++ ++++ +         + + V+   EE YFF++S YQ+ LL + E HP+F
Sbjct: 124 QYCISCETFFPENQIVEPGHCPDCGKKLSTVK---EESYFFKMSKYQEALLQHIEEHPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           ILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT  GY +
Sbjct: 181 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYLTAVGYEN 240

Query: 247 NPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +P+  +  +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+SK
Sbjct: 241 DPEKFETYWNHARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL++R+
Sbjct: 301 SKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGIIGRINSDLANDLGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           + M  K + G I + G   E +  +  +    L ++  +M      +AL  +   +S ++
Sbjct: 361 LGMYHKYFQGKIVSSGEIQEIEIDVYKLWEDTLSQVETHMYYYEYSKALEVIWKFISRMN 420

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481
           +Y D   PW L K  T   R +TV+   +E + ++A+L+  F+P+ A KI++ L +++  
Sbjct: 421 KYIDETMPWALAKEETQQKRLATVMNTLLESLYKIAVLVSPFIPEAAQKIWNQLGISEDI 480

Query: 482 ENRCFQSLD------QRLKP-GFMLHKTFDPIFPRF 510
           E    QSL       + + P G  L K  +PIFPR 
Sbjct: 481 EKAQLQSLHCDVSVFESIFPIGHDLGKA-NPIFPRI 515


>gi|238855586|ref|ZP_04645888.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664778|ref|ZP_05865629.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932728|ref|ZP_06338136.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472661|ref|ZP_07813150.1| methionine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831803|gb|EEQ24138.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529379|gb|EEQ68380.1| methionine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561261|gb|EEX27234.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303138|gb|EFA95332.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 662

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/518 (39%), Positives = 321/518 (61%), Gaps = 9/518 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  ++ ++++   LDISYD FIRTT+  H  + + +++K+  +GDIY
Sbjct: 61  KAEKAGIKPQEYVDNMAKQYKELWKKLDISYDKFIRTTDADHVKSVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EV+K  +G+         + VQ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLKYYKENPDFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   +K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI +   G++  P +  +    +    +  + E ++ M      +A
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGLVTKPASQDDLGSDLAKAANETVVEYQKQMDALHFSQA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  +   V   ++Y D   PW L K+   +  + V+    E +R +AI++   + +   K
Sbjct: 421 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAK 480

Query: 473 IFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           IF  L +  E+   ++L+         + +   PIFPR
Sbjct: 481 IFTQLGLNFEDETQKALEFGAFAWNIKVTEKPTPIFPR 518


>gi|33303699|gb|AAP22257.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 416

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/416 (46%), Positives = 289/416 (69%), Gaps = 10/416 (2%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +  
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
             D + +G     G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRK 179

Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +   
Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMY 239

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+D
Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K 
Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359

Query: 373 YDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           ++G IP      TE DE++++     L+++ E M+N     AL+ +  LVS  ++Y
Sbjct: 360 FNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKY 415


>gi|160939618|ref|ZP_02086966.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437409|gb|EDP15173.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC
           BAA-613]
          Length = 683

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/481 (43%), Positives = 315/481 (65%), Gaps = 19/481 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+I+AD +AR+ R  G DV F TGTDEHGQKI + A+
Sbjct: 25  KKPYYITTAIAYASGKPHIGNTYEIILADSIARYKREQGYDVFFQTGTDEHGQKIEEKAE 84

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD+ +   + + D+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG 
Sbjct: 85  AAGVTPQEFVDKAAAEIKRIWDLMNTSYDKFIRTTDQDHEAQVQKIFKKLYDQGDIYKGY 144

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +     V+  +EE YFFR+S Y  +L+ Y   H
Sbjct: 145 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYAPRLIEYINEH 200

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 201 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVDFDPKHVTYVWLDALTNYITGI 260

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DGS      K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L 
Sbjct: 261 GY--DCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLLQ 318

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 319 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANIL 378

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE---NMQNQLIHRALA 415
           GNLV+R++SM  K +DG++   G   E+DE +  V   VL+E+++    M+   +  A+ 
Sbjct: 379 GNLVNRTISMSNKYFDGVVCDKGVCGEADEDLKKV---VLEEVKKADAKMEQLRVADAMT 435

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ ++    ++Y D   PW L K  +  DR +TVLY   E I   A LL +F+P+ A KI
Sbjct: 436 EIFNIFRRCNKYIDETTPWTLAKDESQKDRLATVLYNLTEAIAIGASLLYSFMPETAEKI 495

Query: 474 F 474
            
Sbjct: 496 L 496


>gi|116492070|ref|YP_803805.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102220|gb|ABJ67363.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 673

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/523 (39%), Positives = 319/523 (60%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIG++Y  I  D  ARF RL+G DV F TGTDEHG KI +
Sbjct: 1   MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLEGKDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T K +VD  + + + + D+L+I+ D FIRTT+  H    + +++K+ D+GDIY
Sbjct: 61  KAEALNTTPKAYVDGMAEDIKKLWDLLEITNDKFIRTTDDYHEKAVQKIFQKLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+ ADG     +    N V+ ++EE YFF++S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTESQLAEVYRDADGNVTGGKAPSGNEVELVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HP FI P  R NE+I+ F+K GL+DL+++R  F WG+ I +DP++++YVWID
Sbjct: 181 WLLDYYQTHPNFIQPASRMNEMINNFIKPGLEDLAVTRTGFKWGVPIKNDPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + DG+  KFWPA++H++GK+I+RFH IYWP  L +  L  P +++ H
Sbjct: 241 ALSNYITALGYSSDEDGNFKKFWPANVHMVGKEIVRFHTIYWPIMLHALGLEQPDQIYGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNVI P  +++  G+DALRY+L++ +  G DG +  +    ++N D
Sbjct: 301 GWLLMKDSKMSKSKGNVIYPETIVKNYGLDALRYYLLKAMPYGNDGNFTPEDFISKINFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G+IPT      + D  + +  +  ++   + M N     
Sbjct: 361 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNDVDVDLETTAATTIKNYEDLMNNLHFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPK 468
           ALA++  LV+  ++Y D   PW L + + D +    ++V+    E +R +AIL+Q  + +
Sbjct: 421 ALAEIWKLVARTNKYIDETTPWILARNDDDESKQKLASVMNHLAESLRVIAILIQPMMTQ 480

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              KIF  L +       Q L    +     + +   PIFPR 
Sbjct: 481 SPAKIFAQLGLDVNQLELQGLKFGEIPADTKVVEKGTPIFPRL 523


>gi|152992719|ref|YP_001358440.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151424580|dbj|BAF72083.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 649

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/514 (41%), Positives = 319/514 (62%), Gaps = 21/514 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N   HIGHAY  IIAD LAR+ R+ GLD  F TGTDEHGQKI ++A+  
Sbjct: 7   KAYITTPIYYVNDIAHIGHAYTTIIADTLARYSRMSGLDTFFLTGTDEHGQKIEESAKAR 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T++ + D+ S  F+++ D   ISYD FIRTT+  H    +  +K + D GDIYK  Y 
Sbjct: 67  GKTSQEYADEISATFKNLWDDFGISYDKFIRTTDADHMKGVQKAFKVMYDNGDIYKDVYK 126

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ + ++    DG++      P   +EEE YFF+LSAY+DKLL++Y  +P 
Sbjct: 127 GHYCISCETFFPESQL---VDGEFCPECGKPTTIVEEESYFFKLSAYEDKLLAWYNDNPN 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP  +RNEVI FV+ GL DLS++R +FDWG+K+P   +DP+++MYVW+DAL NY+T  
Sbjct: 184 CILPKSKRNEVIRFVEGGLDDLSITRTSFDWGVKLPAELNDPKHVMYVWLDALMNYVTAL 243

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D +K  FWPA +H+IGKDILRFHAIYWPAFL+S  L +PK + +HG+    GEK
Sbjct: 244 GY--GTDEAKMDFWPARVHLIGKDILRFHAIYWPAFLMSLGLEMPKHIAAHGWWTRDGEK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P EV +  G+D  RYF++RE+  G DG + +  L  R+N+DL N +GNL+
Sbjct: 302 MSKSKGNVVNPREVADAYGLDNFRYFMLREVPFGGDGDFSQKALIDRINSDLGNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           +R + M  K ++G + +        TE DE  +S     L+++   + +  IHR L ++ 
Sbjct: 362 NRLIGMSGKYFEGKVDSANVSKYYQTELDEVDIS-----LEKLEPLLFDMQIHRYLEELW 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +S  ++  D  +PW L K   +  +  L  +   ++ +++++L   +P +  KI   L
Sbjct: 417 RPLSVANKAIDKYQPWTLMKEGKEGEAMALNGLIANILAKVSVMLYPVMPVICPKIATAL 476

Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
             + +N  + SL  +++L   F + K   P+FPR
Sbjct: 477 SFSIDNASWNSLIKEKQLLETFTIEK-IPPLFPR 509


>gi|288818060|ref|YP_003432408.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787460|dbj|BAI69207.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751661|gb|ADO45144.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/472 (44%), Positives = 300/472 (63%), Gaps = 17/472 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  + ADVLARF+R  G  V F TGTDEHG KI K+AQ  
Sbjct: 2   KFYITTPIYYVNDVPHIGHAYTTVAADVLARFYRQRGYSVFFLTGTDEHGLKIQKSAQER 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ K   DQN+ NF+ +   ++ISYD FIRTT++ H    + ++ K  + GDIYKG Y 
Sbjct: 62  GISPKELADQNAENFKKLWKFMNISYDRFIRTTDEEHIKFVQEVFVKSYENGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E +  + E+    +G        P ++++E  YFFRLS Y+++L+  YE H +
Sbjct: 122 GWYCVGCEEFKPESEL---LEGNICPVHLKPCEYVKEPSYFFRLSKYEEELIRLYEWHKD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI+P  RRNEVISFVK GLKDLS++R +    WGI++P D +  +YVW DAL NY++   
Sbjct: 179 FIMPEYRRNEVISFVKQGLKDLSITRPSVRVKWGIEVPFDREQTIYVWFDALFNYISAL- 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D P      +WPADLH++GKDILRFHA+YWPAFL+S    +PK +F+HG+   +G+K+
Sbjct: 238 -YDRPH-----YWPADLHLVGKDILRFHAVYWPAFLMSVGYQVPKSIFAHGWWKVEGKKM 291

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDP +++++ G+D +RYFL+RE+  G+DG   ++GLK R+  +L+N IGNL S
Sbjct: 292 SKSLGNVIDPYKMVQDYGLDEVRYFLLREVPFGQDGDITQEGLKNRLVGELSNQIGNLFS 351

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R  SM+++  +G      A  E D S  + C  V+++    M+    + AL  V+ L + 
Sbjct: 352 RVSSMVIRYTEG-----KASGEKDRSYEAFCGEVIKDHHHRMEKVDFYNALEAVLKLSNF 406

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++Y D + PW L K++  +   VLY   + +  LA LL  F+P     +F+
Sbjct: 407 LNKYVDEKAPWSLAKSDEKKLKDVLYTLTDGLFVLAYLLYPFMPSKMELVFE 458


>gi|227514298|ref|ZP_03944347.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087346|gb|EEI22658.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 666

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIIRFHTIYWPIMLHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K   G ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509
            +I   L +A E      L     P   ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISISDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|161506812|ref|YP_001576766.1| methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160347801|gb|ABX26475.1| Methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 658

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/524 (39%), Positives = 321/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    G+D LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMRALPFGADGIFTPEDFIERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P P A  +  + +    + V+ + RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVPVAQDKLGKDLQDTAASVIADYREQMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K+   D  S V+    E +R +AI++   + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480

Query: 472 KIFDILFVA-----DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +       +N  F       K    + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTK----VVEKPKPIFPRL 520


>gi|297587469|ref|ZP_06946113.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574158|gb|EFH92878.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 665

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/475 (42%), Positives = 311/475 (65%), Gaps = 8/475 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+  N G     ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKAHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++    DG+  +   + V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++ F+   L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +  K KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDEELFK-KFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+IP P    + D+S++SV      ++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKSLISVVEGCQGKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472


>gi|295107808|emb|CBL21761.1| methionyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 652

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/492 (42%), Positives = 314/492 (63%), Gaps = 11/492 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI   A
Sbjct: 2   DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+  KGDIYKG
Sbjct: 62  EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    P    +EE YFF++S Y D+L+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADRLIDYINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S+   K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGESSEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     DE + +    V  ++ E M    +  A+ +V +
Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVVEPVDEDLKAFALAVPGKVAEKMDKLRVADAMTEVFT 417

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L   +++Y D   PW L K     +R +TVLY  VE I   A LL++F+P+   +I   L
Sbjct: 418 LFKRLNKYIDETMPWALAKDEAKKERLATVLYNLVEGITMGATLLESFMPETTERILAQL 477

Query: 478 FVADENRCFQSL 489
               E R  + L
Sbjct: 478 --NTEKRTLEDL 487


>gi|33303709|gb|AAP22262.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 416

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/416 (46%), Positives = 288/416 (69%), Gaps = 10/416 (2%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   +T + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +  
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
             D + +G     G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRK 179

Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +   
Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKY 239

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+D
Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K 
Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359

Query: 373 YDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + G IP   A  TE DE++++     L+++ E M+N     AL  +  LVS  ++Y
Sbjct: 360 FSGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKY 415


>gi|260663709|ref|ZP_05864597.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260551760|gb|EEX24876.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 666

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K   G ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509
            +I   L +A E      L     P   ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|253579415|ref|ZP_04856685.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849513|gb|EES77473.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 652

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/486 (43%), Positives = 310/486 (63%), Gaps = 13/486 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   EKQKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRQQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K FVD  S   + + D+++ SYD FIRTT++ H    + ++KK+  KGDIYKG
Sbjct: 62  EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    P    +EE YFF++S Y DKL+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQL---VDGKCPDCGR-PCVPAKEEAYFFKMSKYADKLIDYINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG       K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L
Sbjct: 238 IGY--DCDGESTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLL 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN 
Sbjct: 296 QGDGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANT 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G++   G     D+ + +    V  ++ E M    +  A+ +V
Sbjct: 356 LGNLVNRTISMSNKYFGGVVENKGVTEPVDDDLKNFILSVPAKVNEKMDKLRVADAMTEV 415

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++    ++Y D   PW L K     DR +TVLY  VE I   A+LL++F+P+   +I  
Sbjct: 416 FTIFKRCNKYIDETMPWALAKDEEKKDRLATVLYNLVEGICIGAVLLKSFMPETTERILA 475

Query: 476 ILFVAD 481
            L   D
Sbjct: 476 QLNAQD 481


>gi|295692078|ref|YP_003600688.1| methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030184|emb|CBL49663.1| Methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 658

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/524 (40%), Positives = 323/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   L+ISYD FIRTT+++H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLNISYDKFIRTTDEQHVQAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGDDGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +   G +   P A  E  + +    + V+ + RENM +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGHVDAVPVAQAEFGKDLQDTAASVINDYRENMNSLHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LVS  ++Y D   PW L K+   +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDNIWKLVSRANKYIDETTPWALNKEGKKEELSKVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +F  L +  +N       F   D  +K   ++ K   PIFPR 
Sbjct: 481 IMFKQLGLNWDNEDAKHLAFGDFDWDVK---VIEKP-QPIFPRL 520


>gi|299782799|gb|ADJ40797.1| Methionyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 666

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++ +F++ GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K   G ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509
            +I   L +A E      L     P   ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|227431221|ref|ZP_03913275.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352983|gb|EEJ43155.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 702

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/523 (41%), Positives = 322/523 (61%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++   F+D  ++  +D+  ++DISYDDFIRTTE RH      ++ ++ + GDIY
Sbjct: 93  KAEAAGISEIDFLDGMAKQIKDLWKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+   G+    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDDAGKVIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+ F+  GL+DL+++R +FDWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  +      KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVVGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G+++ K  K+SKS GNVI P EV+EE  G+DA+RY+L+R +  G DG +  +    RVN 
Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRSMPFGNDGVFTPEDFVARVNY 391

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K  DG+IP      T  DE ++      + E  +N +     
Sbjct: 392 DLANDLGNLLNRTVAMINKYVDGVIPELLTGKTSFDEDLVRTVEDAIVEYNKNFKELCTA 451

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  V  ++   ++Y D  +PW L K   ++   S+V+      +R  A+LLQ  + + 
Sbjct: 452 DALESVWKIIRRANKYIDETQPWVLAKDENEKEVLSSVMAHLAGALRVTAVLLQPVLTQA 511

Query: 470 ANKIFDILFV--ADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
             KIFD L +  +D+      L   +L  G  + K  +PIFPR
Sbjct: 512 PKKIFDQLGLDYSDKGVAIAGLTFSKLPTGGHVVKKGEPIFPR 554


>gi|225026669|ref|ZP_03715861.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
 gi|224956039|gb|EEG37248.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
          Length = 654

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/474 (43%), Positives = 306/474 (64%), Gaps = 13/474 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI   A  AG+
Sbjct: 7   YITTAIAYTSGKPHIGNTYEIVLADAIARFKRKEGYDVRFQTGTDEHGQKIELKAAEAGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ DKGDIYKG Y G 
Sbjct: 67  SPKEFVDNTAGEIKRIWDLMNTSYDKFIRTTDEDHEKQVQKIFKKLYDKGDIYKGHYEGM 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    P Q  +EE YFFR+S Y D+L+ Y   +P+FI
Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGR-PCQPAKEEAYFFRMSKYADRLIQYINDNPDFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  GY  
Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITGLGY-- 240

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + DG       K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L    K
Sbjct: 241 DCDGESGELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVI   ++++  GVDA+RYF++ E+    DG    D L +R+N+DLAN +GNLV
Sbjct: 301 MSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVITWDLLVERMNSDLANTLGNLV 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K + G++   G     D++++ V      ++ + M    +  A+ ++ +L  
Sbjct: 361 NRTISMSNKYFGGVVANSGVTDGFDKNLMDVALDTKHKVIKCMSKLRVADAMTEIFNLFK 420

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             ++Y D   PW L K     DR +TVLY  VE I   A LL  F+P+ A +IF
Sbjct: 421 RCNKYIDETMPWALAKDPAKQDRLATVLYNLVESITIGASLLSPFMPETAERIF 474


>gi|320104232|ref|YP_004179823.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751514|gb|ADV63274.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 530

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/478 (44%), Positives = 302/478 (63%), Gaps = 5/478 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+E    YI+TAI YPN++PHIG A+E I AD+ AR+ RL G  V F  G DE+  K+++
Sbjct: 1   MREESWFYITTAIDYPNSRPHIGTAFEKIGADIQARYQRLRGKRVRFQMGNDENTIKVSQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+  K +VD  +R F+++   LD+SYDDFI+T+E RH   CR   +++ D GDIY
Sbjct: 61  RAAQLGLEPKPYVDDMARQFQEVWRALDLSYDDFIQTSEPRHAAGCRRFIQQVFDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y G Y    EA+  D EV +G +G+     +  ++ +EEE YFF+LS Y D LL +Y
Sbjct: 121 KKSYVGLYCDGCEAFKTDKEVAEG-NGRCPLHPNQELRRVEEENYFFKLSKYADALLDFY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            SHP+FI P  RRNE+++FV++GL+DLS+SRK F WGIK+P D +  +YVW DAL NYLT
Sbjct: 180 RSHPDFIQPESRRNEIVNFVEAGLQDLSISRKGFTWGIKVPFDEEQTIYVWFDALLNYLT 239

Query: 241 TTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY   D+PD  +A +WPAD+HVIGKDI RFH + WPA L+SA +  P++VF HGF+  
Sbjct: 240 AIGYGDADDPDRWRA-WWPADVHVIGKDITRFHCVIWPAMLMSAGIEPPRRVFGHGFVYV 298

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K SKS GNV+DP E+ +  G DA+RY+  RE   G DG Y ++      NADLAN +
Sbjct: 299 KGAKASKSQGNVVDPHELTQRFGSDAVRYYFARECPFGGDGNYAEERFIDLYNADLANNL 358

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV- 417
           GNL SRS+SM +K +DG++   G    +         R + EI E +++   + AL ++ 
Sbjct: 359 GNLYSRSLSMCVKYFDGVLEEIGDVDPTAWRAGVDWPRFVAEIGELIESFQTNVALQRIW 418

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  +  V++Y  A +P+ L KT+P     V+    E +R LA+L+   +P+ A   ++
Sbjct: 419 LEGLDLVNQYIQATQPFRLVKTDPQATKVVMVNLAEALRALAVLIAPVLPRTARTFYE 476


>gi|313884451|ref|ZP_07818212.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620235|gb|EFR31663.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 675

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/523 (40%), Positives = 326/523 (62%), Gaps = 14/523 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   EK  YI+T I YP+ + HIG++Y  +++D +AR+ RL G DV F TGTDEHGQKI 
Sbjct: 1   MTHTEKTFYITTPIYYPSGRLHIGNSYSTLVSDAMARYKRLMGYDVYFLTGTDEHGQKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A + G+  + +VD  + + + + + L IS D F+RT++  H    + +++++  +GDI
Sbjct: 61  QKAADLGIEPQAYVDGMAADIKALWEKLKISNDGFVRTSDDYHQKAVQDIFERLLAQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQ 173
           Y G Y GWYS+ DE Y+ +    EV+K  +G+         N V+ ++EE YFF+LS Y 
Sbjct: 121 YLGEYEGWYSVSDEEYFTETQLSEVFKDENGKVIGGIAPTGNKVELVKEESYFFKLSNYT 180

Query: 174 DKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL YY+ HP+FI P  R+ E+++ F+K GL+DL++SR +F WGI +  +P++++YVWI
Sbjct: 181 DRLLEYYDQHPDFITPAFRKTEMVNNFIKPGLEDLAVSRTSFTWGIPVKSNPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY ++      KFWPAD+ VIGKDI RFH IYWP  L++ +LPLPKK+++
Sbjct: 241 DALSNYITKLGYGNDHQDIMDKFWPADVQVIGKDISRFHMIYWPILLMALDLPLPKKIYA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+I+ K  K+SKS GNVI P  +I+  G+D  R++L+RE++ G D  +  +    R N 
Sbjct: 301 HGWIVMKDGKMSKSRGNVIYPETLIDRYGLDVTRFYLLREMSQGNDTVFTPEDFVNRANF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+V+M+ K +DG +P     T+ D+   +  +  +    E+M++    +
Sbjct: 361 ELANDLGNLLNRTVAMMNKYFDGQVPQAKVSTDFDQDFEAYLADEMTAYFESMESMTFDQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           AL  V+ +VS  ++Y D   PW L K +P   D+   V+Y   E +R +A LL+ F+ + 
Sbjct: 421 ALDHVMHMVSRTNKYIDETTPWVLAK-DPDLKDQLGAVMYHLAEALRLVANLLRPFMLES 479

Query: 470 ANKIFDILFVADE-NRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
             KIF  L +  E NR    L     P    + K  +PIFPR 
Sbjct: 480 PEKIFQQLGIESETNRQLDDLAWGQFPESAQVVKKGEPIFPRL 522


>gi|210623269|ref|ZP_03293686.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
 gi|210153670|gb|EEA84676.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
          Length = 644

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/511 (41%), Positives = 311/511 (60%), Gaps = 12/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A+ AG
Sbjct: 6   FYVTTPIYYPSGKLHIGHTYTTVAADAIARFKRFCGYDVKFLTGTDEHGEKIQKKAKEAG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T   ++D    + + +   LDISYDDFIRTTE RH +  + ++ K+ ++GDIYKG Y G
Sbjct: 66  MTEIEYLDGMIADIKALWKKLDISYDDFIRTTEPRHTEIIQKIFTKLYEQGDIYKGTYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E+++ + ++    DG             +EE YFF+LS Y+D+L   + S  +F
Sbjct: 126 RYCTPCESFWTESQL---IDGTKCPDCGRETYVAKEEAYFFKLSKYEDRLKELF-SRDDF 181

Query: 187 ILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            LP+ RRNE++S F+  GL+DL ++R TFDWGI +P D ++++YVW+DAL NY+T  GY+
Sbjct: 182 CLPVSRRNEMVSNFLDKGLEDLCVTRTTFDWGIPVPFDEKHVIYVWVDALCNYITALGYM 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D    K+WPA +H+  K+I RFH I WPA L++  L +PK+V+ HG+IL   +K+SK
Sbjct: 242 TDNDEEFKKYWPASVHLTAKEITRFHTIIWPAILMALGLEVPKQVYGHGWILFDDDKMSK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P  +IE  GVDAL+YFL+RE + G+DG Y       R+N+DLAN +GNLVSR+
Sbjct: 302 SKGNVVYPGPMIERYGVDALKYFLLREFSFGQDGSYTNRNFINRINSDLANDLGNLVSRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           V+M+ K  +G+IP     TE DES+    +   ++    M     H AL  V  LV   +
Sbjct: 362 VAMVEKYNEGLIPEATVATEFDESLKEQAAASAKDFEAQMDALQFHEALESVWKLVRRTN 421

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y D   PW L K     +  +TVLY   E IR +A L+   +   AN+I+D L +A + 
Sbjct: 422 KYIDETMPWALAKDEAKKEELNTVLYNLCESIRIIATLINPIMNTTANRIYDQLGIAGQE 481

Query: 484 RC--FQSLDQ--RLKPGFMLHKTFDPIFPRF 510
               ++S+     +K G  +HK  + +FPR 
Sbjct: 482 DITNWESVKSFGLIKVGTKVHKG-EALFPRL 511


>gi|160916068|ref|ZP_02078275.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
 gi|158431792|gb|EDP10081.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
          Length = 651

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/512 (41%), Positives = 317/512 (61%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+TAIAY + +PHIG+ YE+++ D +AR+ R  G DV F TGTDEHGQKI + A+
Sbjct: 6   KGKYYITTAIAYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAK 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T K FVD  +   R   D+++ SYD F+RTT+  H    + ++KK+ ++GDIYK  
Sbjct: 66  EAGITPKEFVDNIAGIVRKNFDMMNTSYDYFVRTTDDYHEKQVQKIFKKLYEQGDIYKST 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +    PV+   EE YFF L  Y  +L+ + E+H
Sbjct: 126 YEGMYCTPCESFWTESQL---VDGKCPDCGR-PVKKATEEAYFFNLQKYSPRLIEHIETH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+I+ F+K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T+ 
Sbjct: 182 PEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITSL 241

Query: 243 GY-LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+ +D   G    K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L   
Sbjct: 242 GFDVDGNHGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +RVN+DLAN +GN
Sbjct: 302 GKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERVNSDLANVLGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G+I  P      D  ++ +    +  + E M    +  A+ ++ +L
Sbjct: 362 LVNRTISMQNKYFHGVISNPMEGDPLDAELIELAVATVHNVDEKMDQLRVGEAIDEIFTL 421

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K  T  DR +TVLY  +E IR  A+LL++F+P+ + KI D L 
Sbjct: 422 LKRCNKYIDETTPWTLGKDETKKDRLATVLYNLLESIRYAAVLLESFMPETSEKILDQLS 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  ++       +L+ G  +      +F R 
Sbjct: 482 TSRRDKASLESFGQLECGHTVEAKPSILFQRI 513


>gi|116617428|ref|YP_817799.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096275|gb|ABJ61426.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 702

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/523 (41%), Positives = 322/523 (61%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++   F+D  ++  +D+  ++DISYDDFIRTTE RH      ++ ++ + GDIY
Sbjct: 93  KAEAAGISEIDFLDGMAKQIKDLWKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+   G+    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDDAGKVIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+ F+  GL+DL+++R +FDWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  +      KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVVGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G+++ K  K+SKS GNVI P EV+EE  G+DA+RY+L+R +  G DG +  +    RVN 
Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRSMPFGNDGVFTPEDFVARVNY 391

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K  DG+IP      T  DE ++      + E  +N +     
Sbjct: 392 DLANDLGNLLNRTVAMINKYVDGVIPELLTGKTSFDEDLVRTVEDAIVEYNKNFKELRTA 451

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  V  ++   ++Y D  +PW L K   ++   S+V+      +R  A+LLQ  + + 
Sbjct: 452 DALESVWKIIRRANKYIDETQPWVLAKDENEKEVLSSVMAHLAGALRVTAVLLQPVLTQA 511

Query: 470 ANKIFDILFV--ADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
             KIFD L +  +D+      L   +L  G  + K  +PIFPR
Sbjct: 512 PKKIFDQLGLDYSDKGVAIAGLTFSKLPTGGHVVKKGEPIFPR 554


>gi|227544734|ref|ZP_03974783.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909020|ref|ZP_07126483.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185274|gb|EEI65345.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894427|gb|EFK87785.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 675

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/520 (40%), Positives = 319/520 (61%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLRGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  + +VDQ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIYK
Sbjct: 63  AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EEE YFF++S Y D 
Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+I+ F+K GL+DL+++R +F WG+K+P+DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFAWGVKVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +G ++ T  A T+ D  +    S V+ E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K  +  D  S V+    + +R +A L+Q  +P    
Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLRIIAALIQPIMPHAPK 482

Query: 472 KIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +I + L +   +     L     P    +     PIFPR 
Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522


>gi|110803560|ref|YP_699780.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684061|gb|ABG87431.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 645

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/477 (41%), Positives = 303/477 (63%), Gaps = 7/477 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI D L
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINDQL 475


>gi|253581458|ref|ZP_04858683.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251836528|gb|EES65063.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 641

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/513 (41%), Positives = 311/513 (60%), Gaps = 11/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+G AY  I ADV+AR+ +  G DV F TGTDEHGQK+ + A+ 
Sbjct: 3   KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETARQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D  +  F +M   L+I Y DFIRTTE RH +  + + KK+ D GDIYKG Y
Sbjct: 63  KGYTPQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYDNGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E +  ++++    +G +       ++ + EE YFF++S YQD LL++ +SHP
Sbjct: 123 SGKYCVSCETFVPENQI---VNGNHCPDCGKELRVVREESYFFKMSKYQDALLAHIDSHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEV+SF+K GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY
Sbjct: 180 DFILPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +NP+    KFW     +H++GKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 240 ENNPELFD-KFWTNGEVMHLLGKDIVRFHAIIWPCMLLSAGVKLPDNIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DPI   ++ GVDA RY L+RE+  G DG Y    +  R+N+DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPIAESKKYGVDAFRYCLLREVQFGNDGDYSTKSVVTRINSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G+I         D+ I ++ +  L E+ E M      ++L  +   +S
Sbjct: 359 NRTLGMYKKYFNGVIVDGTERDVFDDEIENLWNETLSEVTEQMNIVQFSKSLEAIWKFIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K     DR + V+   V  + ++A+++  ++P  A KI++ L V 
Sbjct: 419 RLNKYIDETMPWSLAKDENKKDRLAVVMNHLVNGLYKIAVMVYPYMPAAAQKIWNQLGVE 478

Query: 481 DENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510
              R  +  D     L P   +    +PIFPR 
Sbjct: 479 KLVRDAKVADITGWNLLPAGHILGNAEPIFPRL 511


>gi|227894430|ref|ZP_04012235.1| methionine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863800|gb|EEJ71221.1| methionine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 658

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/520 (39%), Positives = 321/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRAQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT+++H    + +++K+  +GDIY
Sbjct: 61  KAEAQGIKPQQFVDKMAASYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLVKYYKEHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG +   P +  E  + +      V+ E R+ M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGHVDAVPASQDEFGKDLQDTAVNVISEYRKYMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K+   +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKEELSHVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L ++ ++   + L          + +   PIFPR 
Sbjct: 481 KMFEQLGLSWDDEAARKLAFSDFGWNVKVTEKPKPIFPRL 520


>gi|195952737|ref|YP_002121027.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932349|gb|ACG57049.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 493

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/477 (44%), Positives = 302/477 (63%), Gaps = 17/477 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y++T I Y N  PHIGHAY  I AD +AR+ R  G DV F TGTDEHG K+ KAA+  
Sbjct: 2   KFYVTTPIYYVNDVPHIGHAYTTIAADTIARYKRQKGFDVFFLTGTDEHGLKLQKAAEEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K   D+N  NF+++ D L ISYD  IRTT+  H    + +  K+ ++GDIYKG Y 
Sbjct: 62  GMTPKELCDKNFENFKNLWDFLKISYDHIIRTTDDYHKAYVQEVITKVYERGDIYKGYYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           G+Y +  E +  + E+    D  Y    H    + ++EE YFF+LS YQDKLL  YE+  
Sbjct: 122 GYYCVGCEEFKPESEI---KDFDYSCPIHKKKCELIKEETYFFKLSKYQDKLLELYET-- 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P  R+ EVI+FV+ GLKDLS++R  +   WGI++P D  +++YVW DAL NY++  
Sbjct: 177 DFIKPDYRKEEVIAFVRQGLKDLSITRPKERVSWGIELPFDKNHVIYVWFDALFNYISAL 236

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      +K +FWPAD H++GKDILRFHA+YWPAFL+S ++ LPK V++HG+   +G+K
Sbjct: 237 KF-----KNKLEFWPADFHIVGKDILRFHAVYWPAFLMSLDMELPKHVYAHGWWTVEGQK 291

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVI+P +V+ E G+D  RYFL+RE+A G+DG + K+ +K+R+N +LANGIGNL+
Sbjct: 292 MSKSLGNVINPYDVVNEYGLDETRYFLLREVAFGQDGDFSKEAVKRRINGELANGIGNLI 351

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+ +M +K   G+I       + DE    +   VL+   + M     H+AL +V+ LV 
Sbjct: 352 SRTFAMCIK--YGIIKKDD--IKEDEDYKKIAIEVLEAFDKYMNELQFHKALEEVMKLVD 407

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +++Y D + PW L K N      VL   ++ I     +L  F+P    ++FD L V
Sbjct: 408 YLNKYVDEKAPWTLAKNNDPSLKDVLLTLIDGILLSCWMLNPFMPNKMKEVFDALGV 464


>gi|327398216|ref|YP_004339085.1| methionyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327180845|gb|AEA33026.1| Methionyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 621

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/474 (43%), Positives = 302/474 (63%), Gaps = 9/474 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGH+Y  + AD LAR+ RL G DV F TGTDEHGQKI KAA++
Sbjct: 2   KKYYITTPIYYVNDVPHIGHSYTTLAADTLARYKRLLGEDVFFLTGTDEHGQKIQKAAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  T K   D+   NF+ +   LDI+ + F+RTT+  H    +  ++ I  KGDIYKG Y
Sbjct: 62  ANTTPKQLADRVVENFKKLWKKLDITNNFFVRTTDDYHQKCVQEAFEYIYKKGDIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E+YY++ E+    + +        +  ++EE YFF+LSAYQD+LL +YE++P
Sbjct: 122 EGWYCIPCESYYSEIEI---GENKTCPVCGRKLDLVKEESYFFKLSAYQDRLLEFYENNP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+LP  R NE+ SFVK GLKDLS++R +FDWGI +P D ++++YVW DAL NY++  G 
Sbjct: 179 DFVLPQTRYNEIKSFVKMGLKDLSITRTSFDWGIPVPFDDKHVIYVWFDALLNYVSAIGC 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G     WPAD+H +GKDILRFHA+YWPAFL++ +LPLPK V +HG+    G+K+S
Sbjct: 239 RK---GDFDDIWPADVHFVGKDILRFHAVYWPAFLMALDLPLPKHVVAHGWWTVDGKKMS 295

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP E+IE+   DA RYFL+R +  G DG + +  L +R+N+DL N  GNL++R
Sbjct: 296 KSLGNVVDPNEMIEKYPRDAYRYFLLRNVPFGLDGDFSEKELIERINSDLVNDFGNLLNR 355

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++M+ K   G I  P A  +   SIL+      +++ ++++      AL  +   +   
Sbjct: 356 SLTMMEKYSKGNIRRPSAINDDSLSILA--KETFKKVEDSLKVFRFDEALIAIFDFIKSA 413

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++Y   ++PW LKK    D    VLY     ++ ++ ++  F+P  ANK+ D+L
Sbjct: 414 NKYIAQKEPWSLKKQGKQDELDEVLYNLYASLKFISGIISPFLPDAANKMQDML 467


>gi|169335812|ref|ZP_02863005.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258550|gb|EDS72516.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
           17244]
          Length = 651

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/505 (41%), Positives = 318/505 (62%), Gaps = 17/505 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YISTAIAY + +PHIG+ YE+++AD +AR+ RL G DV F TGTDEHGQKI   A  AG+
Sbjct: 7   YISTAIAYTSGKPHIGNTYEIVLADSIARYKRLTGYDVYFQTGTDEHGQKIETKANEAGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + FVD  S     + D+++ SYD F+RTT+  H    + ++KK+ ++GDIYK  Y G 
Sbjct: 67  TPQKFVDNVSEEIHRIWDIMNTSYDKFVRTTDPYHEKKVQQIFKKLYEQGDIYKDEYEGM 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     V + +EE YFF+LS Y D+L+ Y E+HPEFI
Sbjct: 127 YCEPCESFFTESQL---IDGKCPDCGRE-VSYEKEEAYFFKLSKYADRLMEYIETHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+K GLKDL +SR +F WGI +  DP +++YVWIDAL+NY+T  GY  
Sbjct: 183 QPESRKNEMVNNFLKPGLKDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITFLGY-- 240

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +PDG+      K+WPAD+H+IGKDILRFH +YWP  L++ +LPLPK++F H ++L    K
Sbjct: 241 DPDGNHEENYNKYWPADVHLIGKDILRFHTLYWPIMLMALDLPLPKQIFGHPWLLLGEGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVI   ++++  GVD++RY+L+RE+   +DG    + L  R+N +L N +GNLV
Sbjct: 301 MSKSKGNVIYADDLVDLFGVDSVRYYLLREMPFAQDGTLTYEQLIDRINGELVNILGNLV 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K +D ++  P    + D  ++ +  +    + E M    +  A+  +I+L  
Sbjct: 361 NRTIAMSKKYFDSIVSNPKDIEDIDNELIELTEKTPLLVEEKMNELKVADAINLIIALAR 420

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR  TVLY  +E IR + +L+  F+P+    I  +L   
Sbjct: 421 RSNKYIDETMPWVLAKEEDKQDRLRTVLYNLLESIRVIGVLITPFLPETGENIIKML--N 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTF 503
            +N  ++S+ +   L+ G  L+K F
Sbjct: 479 TKNSSYESILKFGGLEEGITLNKAF 503


>gi|260437842|ref|ZP_05791658.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809867|gb|EFF69072.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 655

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/476 (43%), Positives = 310/476 (65%), Gaps = 9/476 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R+ G DV F TGTDEHGQKI   A
Sbjct: 2   EKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMQGYDVRFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ DKGDIYKG
Sbjct: 62  AEAGVTPKQFVDNVAGEIKRIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +     V+  +EE YFF++S Y D+L+ Y   
Sbjct: 122 HYEGMYCTPCESFWTESQL---VDGKCPDCGRK-VKPAKEEAYFFKMSKYADRLIDYINE 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDRHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + D  +   K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 LGYDCDGDNDELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNVI   ++ +  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 GDKMSKSKGNVIYADDMADMFGVDAVRYFVLHEMPFENDGVITWELVVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   E D+ + +     ++++   M +  +  A+ +  +
Sbjct: 358 NLVNRTISMSNKYFGGVVTDKGVTAEVDDDLKNTILEAVKKVDAKMNDLRVADAITETFN 417

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +    ++Y D   PW L K  T  DR STVLY  VE I   A LL+ F+P+   KI
Sbjct: 418 IFKRCNKYIDETMPWALAKDETQADRLSTVLYNLVEGISIGAALLEPFMPETTAKI 473


>gi|269957514|ref|YP_003327303.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306195|gb|ACZ31745.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 541

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/490 (42%), Positives = 298/490 (60%), Gaps = 19/490 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGHAY  + ADV+ R+HR    DV F TGTDEHG+K+ + A  
Sbjct: 7   KPFYLTTPIYYVNDAPHIGHAYTTVAADVVTRWHRQRQEDVWFLTGTDEHGEKVLRTATA 66

Query: 65  AGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GV+ + + D+   + ++ + + LD+  DDFIRTTE RH    +   + + DKG+IY+G 
Sbjct: 67  NGVSPQEWADRLVESAWKPVLETLDVRNDDFIRTTEPRHESAVQAFLQDLHDKGEIYQGS 126

Query: 124 YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    ++  G    +GQ     H  PV+ + E+ YFFR+SAY D+LL+ 
Sbjct: 127 YEGPYCVGCEEYKLPGDLVDGTGEFEGQKVCPIHLKPVEMLAEQNYFFRMSAYADRLLAL 186

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE HPEF+ P   RNEVI FVK GL+DLS+SR TFDWG+ IP D Q+++YVW DAL NY+
Sbjct: 187 YEEHPEFVQPASARNEVIGFVKQGLQDLSISRSTFDWGVPIPWDSQHVLYVWFDALLNYV 246

Query: 240 TTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           T  GY  + D  +A   + WPA++H++GKDILRFHA+ WPA L++A LPLP +VF+HG++
Sbjct: 247 TAVGYGSSDDAERAQLDRLWPANVHLVGKDILRFHAVIWPAMLMAAGLPLPHQVFAHGWL 306

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  GEK+SKS    I P ++I+  G DA RY+ +R IA G DG +  + +  R N +LAN
Sbjct: 307 LVGGEKMSKSRLTGIAPSDIIDTFGSDAFRYYFMRTIAFGGDGSFSWEDMVARYNGELAN 366

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G GNL SR  +M+ K + G++PT GA T  +  + +V +  + +    +    IH AL  
Sbjct: 367 GFGNLASRVAAMVGKYFGGVLPTAGARTGLETDLEAVAATAVADAEAAIDRLAIHDALGA 426

Query: 417 VISLVSEVDRYFDAQKPWELKK-----------TNPDRASTVLYVTVEVIRQLAILLQAF 465
           V +LV   + Y    +PW++ K            +  R +T L   VE +R LA+LL   
Sbjct: 427 VWTLVDAANLYITETQPWKVAKEPGETDASGAGVDGGRLATSLVTAVEALRSLAVLLHPV 486

Query: 466 VPKLANKIFD 475
            PK A  +++
Sbjct: 487 TPKAAQALWE 496


>gi|319957076|ref|YP_004168339.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419480|gb|ADV46590.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 651

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/512 (41%), Positives = 314/512 (61%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  IIAD LA + R+ GL+  F TGTDEHGQKI +AA+ 
Sbjct: 6   KKAYITTPIYYVNDIPHIGHAYTTIIADTLAIYSRMAGLETFFLTGTDEHGQKIEEAAKK 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + K + D+ S  F+ + D  DISYD FIRTT++ H    +  +KK+ +KGDIYK  Y
Sbjct: 66  RGKSPKEYADEISGRFKALWDEFDISYDKFIRTTDEDHKLGVQAAFKKMYEKGDIYKDVY 125

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  EA++ + ++    DG++      P Q +EEE YFFRLS YQDKLL +Y  + 
Sbjct: 126 RGHYCISCEAFFTETQL---VDGEFCPECGKPTQIVEEESYFFRLSKYQDKLLEWYRENE 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           + ILP  RRNEV+ FV+ GL DLS++R +FDWG+K+P   +DP+++MYVW+DAL NYLT 
Sbjct: 183 KCILPKTRRNEVMRFVEGGLDDLSITRTSFDWGVKLPPEINDPKHVMYVWLDALMNYLTA 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D     FWPA +H+IGKDILRFHA+YWPAFL+S ++PLPK + +HG+    GE
Sbjct: 243 LGY--GTDEKLLDFWPARVHLIGKDILRFHAVYWPAFLMSLDMPLPKHIAAHGWWTRNGE 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P EV +  G++  RYF++RE+  G DG + +  L  R+N+DL N +GNL
Sbjct: 301 KMSKSKGNVINPKEVADAYGLENFRYFMLREVPFGGDGDFSQKALIDRINSDLGNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K  +G + +     E     L+     L ++   +    +HR L ++   +
Sbjct: 361 LNRLIGMSGKYSEGSV-SSAKVAELYGDELAEVHDSLDKLEPLLFEMQLHRYLEELWKPL 419

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           S  ++  D  +PW L K+   + A  +L +   ++ +++++L   +PK  + I   L   
Sbjct: 420 SIANKSIDKYQPWVLMKEGKTEEALALLGLIANILAKVSVMLHPVMPKTTDTIARALGFT 479

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
                ++ L +R  L   F + K   P+FPR 
Sbjct: 480 INQTAYEDLIKRKDLLSDFTIEKV-PPLFPRI 510


>gi|309809130|ref|ZP_07703003.1| methionine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170575|gb|EFO72595.1| methionine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 659

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/522 (39%), Positives = 324/522 (62%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIH 411
           LAN +GNL++R++SMI +  DG++  P + TE +  + +  + +  +    E M      
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLV-DPASTTEDEYGKQLKELANNTINLYHEQMDALHFS 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +AL  +  L+S  ++Y D   PW L K    D+   V+    E +R +A+L++  + +  
Sbjct: 420 KALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSP 479

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
             IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 480 VHIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|325913210|ref|ZP_08175579.1| methionine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477474|gb|EGC80617.1| methionine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 659

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSSDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|328950695|ref|YP_004368030.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451019|gb|AEB11920.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 632

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/480 (44%), Positives = 300/480 (62%), Gaps = 12/480 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PHIGHAY  I+AD LAR+HRLDG D  F TGTDEHG+KIA+AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHIGHAYTTIVADYLARWHRLDGYDTYFLTGTDEHGEKIAQAAQKAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  K FVD+ S  FR+    L I+YDDFIRTTE+RH    R + +K+ D GDIY G Y G
Sbjct: 65  LEPKAFVDRVSARFREAWAALGIAYDDFIRTTEERHKAVVRAVLQKVYDAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +  + E+    DG+  +    P +  +E  YFFR+  Y+  L ++ E HPEF
Sbjct: 125 LYCVGCERFLTEKEL---VDGRCPD-HGVPPERRQEGNYFFRMEKYRPWLRAFIEQHPEF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR  +   WGI++P DP ++ YVW DAL NY++  GY
Sbjct: 181 IRPERYRNEVLAMLAEPIGDLSISRPKRRVPWGIELPWDPDHVTYVWFDALLNYVSALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
            ++P     ++WPA  H+IGKDIL+ HA++WPA L SA +PL + +   G++L   G K+
Sbjct: 241 PEDPRFE--RYWPAAQHLIGKDILKPHAVFWPAMLKSAGIPLYRHLNVGGYLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++P E+ E+ G DA+RY+L+RE+A G+DG   + GL  R NADLAN +GNLV 
Sbjct: 299 SKSLGNVVNPFELAEKYGTDAVRYYLLRELAYGQDGAVSESGLVDRYNADLANDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+LK   G++P      E D+ ++   + +   +R  +Q    H+AL +V+     
Sbjct: 359 RTRTMLLKYLGGVLPKAEPAPE-DQPVVEAATTLAARVRPLVQELRFHQALEEVLQFTRL 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++RY +  KPWEL K      R   VLY  VE IR  +ILL+  +P  A +I     + D
Sbjct: 418 LNRYVNEHKPWELAKDPARKPRLEQVLYAVVEGIRIASILLEPAMPTKAREIRAAFALGD 477


>gi|194467624|ref|ZP_03073611.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454660|gb|EDX43557.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 675

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLMGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  + +VDQ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIYK
Sbjct: 63  AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EEE YFF++S Y D 
Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+I+ F+K GL+DL+++R +F WG+K+P DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFTWGVKVPSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK +  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHIIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +G ++ T  A T+ D  +    S V+ E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K  +  D  S V+    + +R +A L+Q  +P    
Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLRIIAALIQPIMPNAPK 482

Query: 472 KIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +I + L +   +     L     P    +     PIFPR 
Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522


>gi|284033606|ref|YP_003383537.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812899|gb|ADB34738.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 523

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/523 (41%), Positives = 309/523 (59%), Gaps = 17/523 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  Y++T I Y  A PHIG AY  +  DVL R+H   G    + TGTDEHG+K+ +
Sbjct: 1   MSGEKAYYVTTPIYYVTAAPHIGSAYTTVAGDVLTRWHAQRGERKWYLTGTDEHGEKVLR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AQ  G++ + + D+        A V +DI+YDDFIRTTE RH +  +   + + D+GD+
Sbjct: 61  SAQAQGMSPQEWTDKLVEQAWKPAWVDVDIAYDDFIRTTEPRHTERVQEFVQALYDQGDV 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLS 178
           YKG Y G Y +  E +    ++    DG      H   ++ + E  YFFRLSAY DKLL 
Sbjct: 121 YKGEYEGLYCVGCEEFKLPADIRTDDDGTQRCMIHGTELETVSETNYFFRLSAYADKLLE 180

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            YE+HPEF+ P   RNEVI+FVK GL+DLS++R TFDWGI +P D  +++YVW+DAL NY
Sbjct: 181 LYETHPEFVAPSSARNEVIAFVKQGLQDLSITRSTFDWGIPVPWDSDHVLYVWVDALLNY 240

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            T  GY  +PD   A+ WPAD+H++GKDILRFHA+ WPA L++A +P+PK+VF+HG++L 
Sbjct: 241 ATAAGYGADPD-RFAELWPADVHLVGKDILRFHAVIWPAMLIAAGMPVPKQVFAHGWLLV 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS    I P E+ +  G DA RY+ +R I  G DG +  + L     ++LANG+
Sbjct: 300 GGEKMSKSKLTAIAPKEITDHFGSDAFRYYFLRTIQFGADGSFSWEHLNAVYTSELANGL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL SR  +M+ K +DG +P P     +++++    +  +      +     H ALA V 
Sbjct: 360 GNLASRIAAMVGKYFDGELPEPTDHGPAEQALADKLAETVAAADRAIDTLAFHDALAAVN 419

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            LV  V+ Y   Q+PW++ K    RA  +T+LY + EV+R +A+L    +PK A K++ +
Sbjct: 420 DLVGAVNGYVSEQEPWKVAKDESQRARLATILYTSAEVLRAVAVLHHPTMPKTATKLWTL 479

Query: 477 LFVADENRCFQSLDQR---------LKPGFMLHKTFDPIFPRF 510
           L    E +     DQR         L  G  L K  + +FPR 
Sbjct: 480 L--GAEAKLGPLADQRIPSAGTWGQLPAGSTLTKG-EALFPRL 519


>gi|255505903|ref|ZP_05348810.3| methionine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265208|gb|EET58413.1| methionine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 661

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/496 (42%), Positives = 316/496 (63%), Gaps = 15/496 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K Y++TAIAY + +PHIG+ YE+I+AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 10  EKKKFYMTTAIAYTSGKPHIGNTYEIILADAIARFKRAQGYDVFFQTGTDEHGQKIELKA 69

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K +VD+ +   + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG
Sbjct: 70  AEAGVTPKEYVDKVAGEVKRIWDLVNASYDKFIRTTDDYHEKQVQKIFKKLYEQGDIYKG 129

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +     V+  +EE YFFR+S Y D+L+ +  +
Sbjct: 130 SYEGMYCTPCESFWTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYADRLIEHINT 185

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DALTNY+T 
Sbjct: 186 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITG 245

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG       K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 246 IGY--DCDGESTEQFKKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 303

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + L +R+N+DLAN 
Sbjct: 304 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFDNDGVITWELLVERLNSDLANT 363

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G++   G     D  + +V     +++ E M+   +  A++ +
Sbjct: 364 LGNLVNRTISMSNKYFGGVVADKGVTEPVDAELEAVALETPKKVTEKMEKLRVADAISDI 423

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L    ++Y D   PW L K  T  DR +TVLY  VE I   A LL+ F+P  A K+  
Sbjct: 424 FVLFKRCNKYIDETMPWALAKDETKQDRLATVLYNLVECISIGAELLEPFMPDTAEKVLA 483

Query: 476 ILFVADENRCFQSLDQ 491
            L    + R  ++++Q
Sbjct: 484 QLNA--QKRGMEAMEQ 497


>gi|257468429|ref|ZP_05632523.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062695|ref|ZP_07927180.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688371|gb|EFS25206.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 641

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/513 (41%), Positives = 311/513 (60%), Gaps = 11/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+G AY  I ADV+AR+ +  G DV F TGTDEHGQK+ + A+ 
Sbjct: 3   KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETAKQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D  +  F +M   L+I Y DFIRTTE RH +  + + KK+ + GDIYKG Y
Sbjct: 63  KGYTPQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYENGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E +  ++++    +G +       ++ ++EE YFF++S YQD LL++ +SHP
Sbjct: 123 SGKYCVSCETFVPENQI---VNGNHCPDCGKELRVVKEESYFFKMSKYQDALLAHIDSHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEV+SF+K GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY
Sbjct: 180 DFILPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +NP+    KFW     +H++GKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 240 ENNPELFD-KFWTNGEVVHLLGKDIVRFHAIIWPCMLLSAGVKLPDNIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+   ++ GVDA RY L+RE+  G DG Y    +  R+N+DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVAETKKYGVDAFRYCLLREVQFGNDGDYSTKSVVTRINSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G+I         D+ I ++ +  L+E+ E M      ++L  +   +S
Sbjct: 359 NRTLGMYKKYFNGVIAAGTTRDAFDDEIENLWNETLKEVTEQMNIVQFSKSLEAIWKFIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K     DR + V+   V  + + A+++   +P  A KI+D L V 
Sbjct: 419 RLNKYIDETMPWALAKDEDKKDRLAVVMNHLVNGLYKTAVMIYPCMPTAAQKIWDQLGVQ 478

Query: 481 DENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
              R  +  +     L P   +    +PIFPR 
Sbjct: 479 KPVRDAKVAEVEGWDLLPAGHVLGNAEPIFPRL 511


>gi|312874747|ref|ZP_07734766.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089492|gb|EFQ47917.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 659

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 321/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D+   V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|168205784|ref|ZP_02631789.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662741|gb|EDT15424.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 645

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471


>gi|312871229|ref|ZP_07731327.1| methionine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872811|ref|ZP_07732876.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091853|gb|EFQ50232.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093243|gb|EFQ51589.1| methionine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 659

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSATEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|309804975|ref|ZP_07699033.1| methionine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165735|gb|EFO67960.1| methionine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 659

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 321/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D+   V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|168209762|ref|ZP_02635387.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168217641|ref|ZP_02643266.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|170712109|gb|EDT24291.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|182380303|gb|EDT77782.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 645

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471


>gi|110801166|ref|YP_697211.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675813|gb|ABG84800.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 645

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471


>gi|210617035|ref|ZP_03291370.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
 gi|210149558|gb|EEA80567.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
          Length = 643

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/479 (42%), Positives = 307/479 (64%), Gaps = 13/479 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 14  DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGV+ K FVD+ +   + +AD+++ SYD FIRTT+  H    + ++K++ ++GDIYKG
Sbjct: 74  EEAGVSPKEFVDKVAGEVKAIADMMNTSYDKFIRTTDDYHEKQVQKIFKRLYEQGDIYKG 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 134 HYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAQEEAYFFKMSKYADRLIEHINT 189

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 190 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 249

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG       K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L
Sbjct: 250 IGY--DCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 307

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 308 QGDGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 367

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G +   G   + D  + +V       + E M    +  A+ ++
Sbjct: 368 LGNLVNRTVSMTNKYFGGSVTDKGVAGDVDADLKAVVDGTPAAVEEKMDKLRVADAITEI 427

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +L    ++Y D   PW L K     DR  TVLY  ++ I + A LL +F+P+ A KI 
Sbjct: 428 FNLFKRCNKYIDETMPWVLAKDEAQKDRLETVLYNLIDSISKGAELLSSFMPETAEKIL 486


>gi|169343256|ref|ZP_02864267.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182624314|ref|ZP_02952099.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|169298554|gb|EDS80635.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|177910532|gb|EDT72905.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 645

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 301/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471


>gi|312874068|ref|ZP_07734103.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090408|gb|EFQ48817.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 659

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/524 (39%), Positives = 320/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVA--DENR---CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            IF+ L ++  D N    C+ +   +      + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANAASLCWGAYGWK----NYVTKNPKPIFPRL 520


>gi|58336554|ref|YP_193139.1| methionyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58253871|gb|AAV42108.1| met-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 658

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/524 (39%), Positives = 322/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K FVD+ + +++ +   L+ISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  +G + P P A  +  + +    + V+ + RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    +  S V+    E +R +A++++  + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP 480

Query: 472 KIFDILFV----ADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +     DE +  F       K    + +   PIFPR 
Sbjct: 481 KMFEQLGLNWNDEDERKLAFNDFGWNTK----VVEKPTPIFPRL 520


>gi|325912366|ref|ZP_08174762.1| methionine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920621|ref|ZP_08277308.1| methionine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|325475837|gb|EGC79007.1| methionine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328935879|gb|EGG32339.1| methionine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 659

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|227877968|ref|ZP_03995972.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256844348|ref|ZP_05549834.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849249|ref|ZP_05554682.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047264|ref|ZP_06020222.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381475|ref|ZP_06627470.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
           214-1]
 gi|312978357|ref|ZP_07790099.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862438|gb|EEJ69953.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256613426|gb|EEU18629.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256714025|gb|EEU29013.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572509|gb|EEX29071.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921945|gb|EFD98952.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
           214-1]
 gi|310894700|gb|EFQ43772.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 658

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/524 (40%), Positives = 321/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   L+ISYD FIRTT+K H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLNISYDKFIRTTDKEHVAAVQKIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++ F+K GL+DLS++R T +WGI +  DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVLSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGDDGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +   G +   P A  E  + +    + V+ + RENM +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGHVDAVPVAQAEFGKDLQDTAASVINDYRENMDSLHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LVS  ++Y D   PW L K+   +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDNIWKLVSRANKYIDETTPWALNKEGKKEELSKVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +F  L +  +N       F   D  +K   ++ K   PIFPR 
Sbjct: 481 IMFKQLGLNWDNEDAKHLAFGDFDWDVK---VIEKP-QPIFPRL 520


>gi|186680640|ref|YP_001863836.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463092|gb|ACC78893.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 534

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/530 (40%), Positives = 313/530 (59%), Gaps = 30/530 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  I ADV+ARFHRL G  VL  TGTDEHGQKI ++
Sbjct: 6   KTEKTFALTTPLYYVNDVPHIGSAYTTIAADVVARFHRLLGHQVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F D+   +F  +  +LDI YD F RTT  RH    +  ++++ + GDIY+
Sbjct: 66  AESLGKAPQEFCDEVVPSFISLWQLLDIKYDRFSRTTAPRHEAIVKEFFERVWESGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + ++ +G     +  +   V+W +E+ YFFRLS YQ+KL  +Y+
Sbjct: 126 GQQQGWYCVSCEEFKEERDLLEGHRCPIHTNKE--VEWRDEQNYFFRLSKYQNKLTEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P FI P  RRNEV+SFV  GL+D S+SR   DWG  +P DP++ +YVW DAL  Y+T 
Sbjct: 184 SKPNFIQPESRRNEVLSFVNQGLQDFSISRVNLDWGFPVPVDPKHTLYVWFDALLGYVTA 243

Query: 242 TGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              L  PD           +WP +LH+IGKDILRFHA+YWPA LLSA LPLP++VF HGF
Sbjct: 244 ---LLEPDAEPTLANALETWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPERVFGHGF 300

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G+K+ KSLGN +DP+ +++  G DA+RY+ ++EI  GKDG +++      +NADLA
Sbjct: 301 LTKDGQKMGKSLGNTLDPVSLVQRYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLA 360

Query: 356 NGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRA 413
           N +GNL++R++SM+ K   D  +P+ G    SDE+ L ++  R+ ++++E  +     +A
Sbjct: 361 NDLGNLLNRTLSMVKKYCVDNNVPSIGNEGISDENPLKTIGLRLGEQVKEAYKELAFSQA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
              ++SL    +++ D Q PW L K+   +    VLY  +E +R  A LL   +P +++ 
Sbjct: 421 CGAILSLAQASNKFIDEQAPWSLYKQGQQESVEKVLYAVLESVRLAAYLLSPIIPNISSD 480

Query: 473 IFDIL-FVADENRCFQSLDQRLKPGFMLHK------------TFDPIFPR 509
           I+  L F  D N   QS    +   F  H             TF P+F R
Sbjct: 481 IYQQLGFGIDFNDQIQS---SVTAPFATHATWGILSSKQQLGTFQPVFKR 527


>gi|259500883|ref|ZP_05743785.1| methionyl-tRNA synthetase [Lactobacillus iners DSM 13335]
 gi|302190664|ref|ZP_07266918.1| methionyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167577|gb|EEW52072.1| methionyl-tRNA synthetase [Lactobacillus iners DSM 13335]
          Length = 659

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 320/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|227903105|ref|ZP_04020910.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227869091|gb|EEJ76512.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 661

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/524 (39%), Positives = 322/524 (61%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 4   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K FVD+ + +++ +   L+ISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 64  KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 124 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 183

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 184 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 243

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 244 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 303

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 304 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 363

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  +G + P P A  +  + +    + V+ + RE M +    +
Sbjct: 364 LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ 423

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    +  S V+    E +R +A++++  + + A 
Sbjct: 424 ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP 483

Query: 472 KIFDILFV----ADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +     DE +  F       K    + +   PIFPR 
Sbjct: 484 KMFEQLGLNWNDEDERKLAFNDFGWNTK----VVEKPTPIFPRL 523


>gi|304438970|ref|ZP_07398893.1| methionine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372636|gb|EFM26219.1| methionine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 664

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/509 (41%), Positives = 313/509 (61%), Gaps = 7/509 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I YP+   HIGH Y  + AD L +F  L G DV FTTG+DEHGQK+ + A  
Sbjct: 3   KKYYLTTPIYYPSDNLHIGHTYCTVAADALKKFKILQGYDVYFTTGSDEHGQKLMQKAHE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K ++D    N + +   +DI YD FIR+T++ H    + +++K+ DKG+IYK  Y
Sbjct: 63  YGMEPKEYIDHIVDNIKALWKTMDIDYDYFIRSTDEIHEKNVQNIFQKLYDKGEIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y    E+++ + ++    +G             +EE YFFRLS Y+DKL+  Y  HP
Sbjct: 123 EGYYCTPCESFWTESQL---GEGHTCPDCGRETHLAKEEAYFFRLSKYRDKLIELYNEHP 179

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI+P  R+NE++ +F++ GL DLS+SR +F WG+K+P D  +I+YVWIDAL+ YLT  G
Sbjct: 180 EFIVPESRKNEMVKNFLEGGLDDLSVSRSSFKWGVKVPFDDNHIVYVWIDALSCYLTGLG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  N D    +FWPAD+H++GK+I+RFH I WPA L++ ++PLPK+VF HG+IL   +K+
Sbjct: 240 YGWN-DEQFNEFWPADVHLVGKEIMRFHTIIWPAILMALDMPLPKQVFGHGWILFDNDKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+ P  +I+  GVDAL+YFL+RE + G DG + K+    R+N+DLAN +GNLVS
Sbjct: 299 SKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMARLNSDLANDLGNLVS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+VSMI+K  DG+I    A TE D+S++ + + +  ++ + M+      AL  + +LV  
Sbjct: 359 RTVSMIIKYNDGVIEKTDAKTEFDDSLIELATSIRSKVEKAMETYQFSDALEAIWTLVRR 418

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     D  + VLY   E +R ++IL+  F+   A +I   L +  
Sbjct: 419 GNKYVDETTPWILAKDEAKKDELNNVLYNLAESLRIVSILISPFLTNTAKEIRRQLGIEG 478

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E +   + +  L          D IFPR 
Sbjct: 479 EIKLEDASEFGLLASGAKVTKGDVIFPRL 507


>gi|303234887|ref|ZP_07321512.1| methionine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494005|gb|EFL53786.1| methionine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 666

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/475 (42%), Positives = 311/475 (65%), Gaps = 8/475 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   KEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+  N G     ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++    DG+  +   + V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++ F+   L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + D    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQD-DELFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+IP P    + D++++SV     +++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKNLISVVEGCQEKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472


>gi|282900792|ref|ZP_06308732.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194322|gb|EFA69279.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 529

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/481 (41%), Positives = 299/481 (62%), Gaps = 7/481 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  I AD +ARF RL G +V+F TGTDEHGQKI ++
Sbjct: 6   KTSKTFALTTPLYYVNDVPHIGSAYTTIAADTIARFQRLLGNEVIFITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ+ G + + F DQ   +F D+  +L+I YD F RTT+ +H    +  + ++ ++GDIY+
Sbjct: 66  AQSQGKSPQEFCDQIVPSFIDLWQILNIQYDRFSRTTDLKHQVIVKEFFHRVWEQGDIYR 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G     +  +   V+W +E+ YFFRLS YQ  L  +Y+
Sbjct: 126 GEQKGWYCVSCEEFKEERELIEGKRCPIHTTKE--VEWRDEQNYFFRLSKYQKPLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP FI P  RRNEV+SFV  GL+D S+SR   DWG  +P D Q+ +YVW DAL  Y+T 
Sbjct: 184 SHPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTQHTLYVWFDALLGYITA 243

Query: 242 ---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               G     + + +K+WP +LH+IGKDILRFHA+YWPA L+SANLPLPK+VF HGF+  
Sbjct: 244 LLEPGTEPTLENAVSKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPKQVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ K+LGN +DP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKTLGNTVDPVALVKKYGSDAVRYYFLKEIEFGKDGDFNEIRFIHVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ-V 417
           GNL++R+++M+ K   G IP+        E+ L      L E  +   + L    +AQ V
Sbjct: 364 GNLLNRTLNMVKKYCAGEIPSIAPQDIPPENTLKTIGGQLGEKVKQAYSVLAFNEVAQAV 423

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   +++ D Q PW L K+   +  +TVLY  +E +R  A LL   +P +++ I+  
Sbjct: 424 MLLVQASNKFIDEQAPWSLYKQGKQNEVATVLYTVLESVRLTAYLLSPIIPNISSDIYQQ 483

Query: 477 L 477
           L
Sbjct: 484 L 484


>gi|323690917|ref|ZP_08105209.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323505042|gb|EGB20812.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 657

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/478 (43%), Positives = 304/478 (63%), Gaps = 13/478 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+I+AD +AR+ R  G DV F TGTDEHGQKI   A+
Sbjct: 6   KKPYYITTAIAYTSGKPHIGNTYEIILADSIARYKREQGFDVRFQTGTDEHGQKIELKAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD  +   + + D+++ SYD FIRTT+K H +  + ++KK+ DKGDIYKG 
Sbjct: 66  EAGVTPQEFVDGVAAQIKSIWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKGDIYKGH 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   +V    DG+  +    PV   +EE YFF++S Y  +L+ +   H
Sbjct: 126 YEGLYCTPCESFWTSSQV---TDGKCPDCGR-PVVPAKEEAYFFKMSKYAQQLIDHINEH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDALTNYITGL 241

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG+      K+WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L 
Sbjct: 242 GY--DCDGNHGELFGKYWPADLHLIGKDIIRFHTIYWPIFLMALELPLPKQVFGHPWLLQ 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 300 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANIL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K + G +   GA  E+D  + +     ++ + E M    +  A+ ++ 
Sbjct: 360 GNLVNRTISMSNKYFGGEVADKGAAGEADADLKATVLEAVKRVDEKMDKLRVADAITEIF 419

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +    ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ A KI 
Sbjct: 420 GIFRRSNKYIDETMPWTLAKDEAQKDRLATVLYNLTEAITIGASLLYSFMPETAEKIL 477


>gi|295089976|emb|CBK76083.1| methionyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 661

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/491 (42%), Positives = 309/491 (62%), Gaps = 15/491 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A  AGV
Sbjct: 10  YITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAAEAGV 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVDQ +   + + D+++ SYD FIRTT+  H +  + ++KK+ D+GDIYKG Y G 
Sbjct: 70  TPKEFVDQVAGEIKTIWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQGDIYKGYYEGM 129

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PVQ  +EE YFFR+S Y  +L+ Y   HPEFI
Sbjct: 130 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFRMSKYAQRLIDYINEHPEFI 185

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  GY  
Sbjct: 186 QPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVSFDPKHVTYVWLDALTNYITGLGY-- 243

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           N  G       K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L    K
Sbjct: 244 NCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGK 303

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNLV
Sbjct: 304 MSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANILGNLV 363

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K + G++   G   + D  + +V    +++  E M    +  A+ ++  +  
Sbjct: 364 NRTISMTNKYFGGVVEKTGVTEDVDADLKAVVLEAVKKADEKMDRLRVADAITEIFGIFR 423

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K    +A  S VLY   E I   A LL +F+P+ + KI   L   
Sbjct: 424 RSNKYIDETTPWALAKDEEKKARLSEVLYNLTEAITIGASLLASFMPETSEKILSQL--N 481

Query: 481 DENRCFQSLDQ 491
            + R  +S+++
Sbjct: 482 TQKRSLESMNE 492


>gi|229825724|ref|ZP_04451793.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC
           49176]
 gi|229790287|gb|EEP26401.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC
           49176]
          Length = 686

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/480 (43%), Positives = 304/480 (63%), Gaps = 13/480 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+TAI Y + +PHIG+ YE+I+AD +ARF R +G DV F TGTDEHGQKI  
Sbjct: 1   MSEKKPYYITTAITYTSGKPHIGNTYEIILADAIARFKRKEGYDVRFQTGTDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T K FVD  +R  + + D+ + SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  RAIEAGQTPKEFVDSVAREVKRLWDLCNTSYDRFIRTTDEDHEKQVQKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    EA+Y + ++   ADG+     H  V   EEE YFF++S Y D+L+ + 
Sbjct: 121 KGAYKGMYCTECEAFYTNSQL---ADGKCPEC-HGEVHPAEEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++P+FI P+ R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DAL+NY+
Sbjct: 177 NNNPDFIRPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDSKHVVYVWLDALSNYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H +
Sbjct: 237 TGLGY--DADGNYGDLYKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS GNVI   ++    GVDA+RYF++ E+    DG    + + +R N+DLA
Sbjct: 295 LLQGGEKMSKSKGNVIYADDMASLFGVDAVRYFVLHEMPYENDGVITWELMAERYNSDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNLVSR+V+M  K + G+I + G     D  +  +    L +I   M+      A+ 
Sbjct: 355 NTLGNLVSRTVAMSNKYFGGVIESTGVEEPVDNELKEIAIGCLSKIINKMKELRAADAIT 414

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ +L    ++Y D  +PW L K      R   VLY   E I   A LL +F+P+ + KI
Sbjct: 415 EIFTLFKRCNKYIDETEPWLLAKEEDKFPRLKEVLYNLSESIMIGASLLHSFMPETSEKI 474


>gi|33303705|gb|AAP22260.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 411

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/411 (46%), Positives = 285/411 (69%), Gaps = 10/411 (2%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   +T + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-- 138
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +  
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 139 --DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
             D + +G     G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRK 179

Query: 194 NEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           NE+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +   
Sbjct: 180 NEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKY 239

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+D
Sbjct: 240 KKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVD 299

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K 
Sbjct: 300 PVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKY 359

Query: 373 YDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           ++G IP      TE DE++++     L+++ E M+N     AL  +  LVS
Sbjct: 360 FNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVS 410


>gi|282601236|ref|ZP_05981162.2| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569800|gb|EFB75335.1| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 676

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 220/518 (42%), Positives = 310/518 (59%), Gaps = 18/518 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI+T I YP+ + HIGH Y  +  D +AR+ RL G +V+F TGTDEHGQKI   A
Sbjct: 8   EQKKFYITTPIYYPSDKLHIGHTYCTVATDAMARYKRLQGYNVMFLTGTDEHGQKIELKA 67

Query: 63  QNAGVTTKVFVD---QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + AGVT + FVD   +  +  +D+  +++ISYD FIRTT+  H    + ++KK+ DKGDI
Sbjct: 68  KEAGVTPQQFVDNIVEGPKGVKDLWKLMNISYDRFIRTTDDYHVGAIQKIFKKMYDKGDI 127

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y    E+++ + ++  G           PV   EEE YFFRLS Y D++   
Sbjct: 128 YKGTYKGKYCTPCESFWTESQLVNGCCPDC----GRPVVDAEEEAYFFRLSKYADRVRDL 183

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
              + +F+LP  R NE++ +F+  GL DL +SR +F WGI +  DP++++YVWIDAL NY
Sbjct: 184 L-VNTDFLLPRSRVNEMVHNFIDPGLDDLCVSRTSFKWGIPVDFDPKHVVYVWIDALFNY 242

Query: 239 LTTTGYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            T  G++++  PD     FWPAD+H IGK+I+RFH+I WPA L+S  +PLPK V+ HG++
Sbjct: 243 TTALGFMNDKYPDSDYETFWPADVHFIGKEIVRFHSIIWPAMLMSMEMPLPKHVYGHGWL 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV+DP  + E    DALRYFL+R+   G DG +  + L  R+N DLAN
Sbjct: 303 LLDGGKMSKSKGNVVDPYLLAERYSADALRYFLLRDFPFGSDGNFSNELLINRINMDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+ +M  K + G +P   A    D+++L     +      +M+      ALA 
Sbjct: 363 DLGNLLSRTTAMADKYFGGTLPENQAAGPEDDALLEKAKGLRARYEADMEAYAFQNALAD 422

Query: 417 VISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           V  ++   ++Y DA  PW L K   T P R + VLY   E +R   +LLQ F+P    KI
Sbjct: 423 VFDVIDAANKYIDATAPWVLAKNEETKP-RLARVLYNLAETLRICTVLLQPFMPDTCVKI 481

Query: 474 FDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509
           F  L VADE + + S      L     LHK  + IFPR
Sbjct: 482 FGQLNVADEGKTWDSAAAFGTLPVTATLHKG-ENIFPR 518


>gi|283797633|ref|ZP_06346786.1| methionine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074744|gb|EFE12108.1| methionine--tRNA ligase [Clostridium sp. M62/1]
          Length = 661

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/491 (42%), Positives = 309/491 (62%), Gaps = 15/491 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A  AGV
Sbjct: 10  YITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAAEAGV 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVDQ +   + + D+++ SYD FIRTT+  H +  + ++KK+ D+GDIYKG Y G 
Sbjct: 70  TPKEFVDQVAGEIKTIWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQGDIYKGYYEGM 129

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PVQ  +EE YFFR+S Y  +L+ Y   HPEFI
Sbjct: 130 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFFRMSKYAQRLIDYINEHPEFI 185

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  GY  
Sbjct: 186 QPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVSFDPKHVTYVWLDALTNYITGLGY-- 243

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           N  G       K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L    K
Sbjct: 244 NCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGK 303

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNLV
Sbjct: 304 MSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANILGNLV 363

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K + G++   G   + D  + +V    +++  E M    +  A+ ++  +  
Sbjct: 364 NRTISMTNKYFGGVVEKTGVTEDVDADLKAVVLEAVKKADEKMDRLRVADAITEIFGIFR 423

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K    +A  S VLY   E I   A LL +F+P+ + KI   L   
Sbjct: 424 RSNKYIDETTPWALAKDEEKKARLSEVLYNLTEAITIGASLLASFMPETSEKILSQL--N 481

Query: 481 DENRCFQSLDQ 491
            + R  +S+++
Sbjct: 482 TQKRSLESMNE 492


>gi|295398235|ref|ZP_06808281.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973585|gb|EFG49366.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 672

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 328/521 (62%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E  YI+T I YP+ + HIG+ Y  + +D LAR+ R +  DV+F TG DEHGQKI + 
Sbjct: 3   ENKETFYITTPIYYPSGKLHIGNTYTTVASDTLARYKRANDFDVMFLTGADEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD  +   +++   + IS D F+RT+ ++H +  + ++ ++ ++GDIY 
Sbjct: 63  AEEQGISPQEYVDGMAAGMQELWKTMKISNDIFMRTSSQQHIEAIQYIFDRLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE ++ +   +EVYK  +G+    +    + V+ ++EE YFF++S Y D+
Sbjct: 123 GEYEGWYSVSDEEFFTETQLEEVYKDENGKVIGGKAPSGHDVELVKEESYFFKMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YYE +P FI P  R+NE+I+ F+K GL+DL++SR +F+WG+ +  +P++++YVWIDA
Sbjct: 183 LLQYYEENPTFIQPETRKNEMINNFIKPGLEDLAVSRTSFNWGVPVKSNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY+T  GY +    +  K+WPA++H +GK+I+RFH IYWP  L++ +LPLPK++F HG
Sbjct: 243 LANYITALGYPNADAENFDKYWPANIHFVGKEIVRFHTIYWPIMLMALDLPLPKQIFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L +  K+SKS GNV+ P  ++E  G+DALRY+L+RE+  G DG +  D    R+N DL
Sbjct: 303 WLLMQDGKMSKSKGNVVYPEMLVERYGLDALRYYLMREVKFGHDGIFTPDNFINRINYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSM+ K   G +   PG  T+ D  +  + +  +   R++M       A
Sbjct: 363 ANDLGNLLNRTVSMVNKYLGGQVGAYPGQITDFDAPLEDLITTEVAAYRQSMDALQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V  ++S  ++Y D   PW L K   +  +  +V+Y  V+ +R +AIL+Q  + +   
Sbjct: 423 LDHVWEIISRTNKYIDETAPWILAKDEAEAGKLQSVMYHLVDSLRVIAILIQPVMVETPA 482

Query: 472 KIFDILFVA-DENRCFQSLDQRLKPGFM-LHKTFDPIFPRF 510
           KIF+ L +  D +  F++    L P    + +   PIFPR 
Sbjct: 483 KIFEQLGLDFDADAGFENAKVGLYPETAKVVEKGQPIFPRL 523


>gi|71746704|ref|XP_822407.1| methionyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70832075|gb|EAN77579.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 773

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/500 (42%), Positives = 301/500 (60%), Gaps = 28/500 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            ++++ I Y NA PHIGH Y  +I DV+ R+HR+ G  V   TGTDEHGQK+A+AA+   
Sbjct: 242 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQ 301

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+   F    +  F+   + +D S D FIRTT ++H    + LW K+  KGDIY G Y G
Sbjct: 302 VSPYDFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEG 361

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP----------VQWMEEEGYFFRLSAYQDKL 176
           WYS+ DE++     +  G D        NP          V W+ EE Y FRLSA++++L
Sbjct: 362 WYSISDESFLTPQNITDGVD-----KDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERL 416

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L +Y ++P  I+P  RR EVI  V+ GL DLS+SRK     +W I +P +P + +YVW+D
Sbjct: 417 LEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLD 476

Query: 234 ALTNYLTTTGYLDNPDG---------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ALTNYLT +    +  G         S+ + +PAD+HVIGKDIL+FHAIYWPAFLLSA L
Sbjct: 477 ALTNYLTGSRLRVDESGKEVSLADDFSELERFPADVHVIGKDILKFHAIYWPAFLLSAGL 536

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           PLPKK+ +HG+     +KISKSLGNV DP+E  EE G DAL+YFL+RE     DG Y   
Sbjct: 537 PLPKKIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDK 596

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +  R+N +LA+ +GNLV R  S  + + +G  P+P A+TE DES++ +   +       
Sbjct: 597 NMIARLNGELADTLGNLVMRCTSAKI-NVNGEWPSPAAYTEEDESLIQLIKDLPGTADHY 655

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                I +A+  V  ++  ++ Y     PW+L KT+P+R  TVLY+T+E +R   +LL  
Sbjct: 656 YLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTDPERLRTVLYITLEGVRVTTLLLSP 715

Query: 465 FVPKLANKIFDILFVADENR 484
            +P+ +  IFD+L V + +R
Sbjct: 716 ILPRKSVVIFDMLGVPEVHR 735


>gi|256027687|ref|ZP_05441521.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765647|ref|ZP_06525025.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717202|gb|EFD81214.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 639

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/518 (41%), Positives = 321/518 (61%), Gaps = 14/518 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK+ EK  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ 
Sbjct: 1   MKKNEKEFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTYFMTGLDEHGQKVE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA+  G T + + D+ + NF++M   LDI YDDFIRTTE RH    R +   ++ KGDI
Sbjct: 61  QAAEQNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y +  E ++ ++++  G++      +   ++ ++EE YFF++S Y D LL +
Sbjct: 121 YKGEYEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKH 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E HP+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+
Sbjct: 178 IEEHPDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYI 237

Query: 240 TTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T+ G+ +N +    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+  
Sbjct: 238 TSAGF-ENDEKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWT 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +GEK+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN 
Sbjct: 297 SEGEKMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLAND 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL++R++ M  K ++G++         D+ I S+ + V++++ + M      RAL  +
Sbjct: 357 LGNLLNRTLGMYKKYFNGVVVASSTAEPIDDEIKSMFNDVIKDVEKYMYLFEFSRALETI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +S +++Y D   PW L K  T   R +TV+ +  E + ++A L+  ++P+ A KI +
Sbjct: 417 WKFISRLNKYIDETMPWSLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISN 476

Query: 476 ILFVADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509
            L +  +    +  D +     K G  L +   PIFPR
Sbjct: 477 QLGINKDITNVKFDDIKGWDIFKAGHKLGEA-SPIFPR 513


>gi|323483574|ref|ZP_08088959.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum
           WAL-14163]
 gi|323403130|gb|EGA95443.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum
           WAL-14163]
          Length = 657

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/478 (42%), Positives = 304/478 (63%), Gaps = 13/478 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A+
Sbjct: 6   KKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGFDVRFQTGTDEHGQKIELKAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD  +   + + D+++ SYD FIRTT+K H +  + ++KK+ DKGDIYKG 
Sbjct: 66  EAGVTPQEFVDGVAAQIKSIWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKGDIYKGH 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   +V    DG+  +    PV   +EE YFF++S Y  +L+ +   H
Sbjct: 126 YEGLYCTPCESFWTSSQV---TDGKCPDCGR-PVVPAKEEAYFFKMSKYAQQLIDHINEH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDALTNYITGL 241

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG+      K+WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L 
Sbjct: 242 GY--DCDGNHGELFGKYWPADLHLIGKDIIRFHTIYWPIFLMALELPLPKQVFGHPWLLQ 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 300 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANIL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K + G +   GA  E+D  + +     ++ + E M    +  A+ ++ 
Sbjct: 360 GNLVNRTISMSNKYFGGEVADKGAAGEADADLKATVLEAVKRVDEKMDKLRVADAITEIF 419

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +    ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ A KI 
Sbjct: 420 GIFRRSNKYIDETMPWTLAKDEAQKDRLATVLYNLTEAITIGASLLYSFMPETAEKIL 477


>gi|309803659|ref|ZP_07697749.1| methionine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164257|gb|EFO66514.1| methionine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 675

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/519 (39%), Positives = 319/519 (61%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI + A
Sbjct: 19  EKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQKA 78

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY G
Sbjct: 79  EAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIYLG 138

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D+L
Sbjct: 139 EYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYADRL 198

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 199 LEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 258

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F HG+
Sbjct: 259 SNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGHGW 318

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN DLA
Sbjct: 319 VLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFDLA 378

Query: 356 NGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M      +AL
Sbjct: 379 NDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSKAL 438

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +    I
Sbjct: 439 DTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPVHI 498

Query: 474 FDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
           F+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 499 FEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 536


>gi|167760642|ref|ZP_02432769.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704]
 gi|167661767|gb|EDS05897.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704]
          Length = 637

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/483 (42%), Positives = 309/483 (63%), Gaps = 16/483 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  EEAGVTPKEFVDGVAGQIQTIWDLMNTSYDKFIRTTDADHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +     VQ  +EE YFF++S Y D+L+ +  S
Sbjct: 122 YYEGMYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFFKMSKYADRLIEHINS 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE++ +F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY D    S  +F   WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L 
Sbjct: 238 IGY-DCGGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQ 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 297 GDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-----IRENMQNQLIHRA 413
           GNLV+R++SM  K +DG++       + D   +    R + E     +   M    +  A
Sbjct: 357 GNLVNRTISMTNKYFDGVVTDKKVADDEDAKAVDADLRAVTENTPKAVEAKMDELRVADA 416

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + ++ +L    ++Y D   PW L K     DR  TVLY  +E I+  A+LL++F+P  + 
Sbjct: 417 ITEIFNLFKRCNKYIDETMPWALAKDEDKKDRLETVLYNLLESIKAGAVLLESFMPDTSA 476

Query: 472 KIF 474
           KI 
Sbjct: 477 KIL 479


>gi|169824241|ref|YP_001691852.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831046|dbj|BAG07962.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 666

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/475 (42%), Positives = 311/475 (65%), Gaps = 8/475 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+  N G     ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++    DG+  +   + V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++ F+   L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDEELFN-KFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+IP P    + D+S++SV     +++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKSLISVVEGCQEKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472


>gi|261332101|emb|CBH15094.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 773

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/500 (42%), Positives = 299/500 (59%), Gaps = 28/500 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            ++++ I Y NA PHIGH Y  +I DV+ R+HR+ G  V   TGTDEHGQK+A+AA+   
Sbjct: 242 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQ 301

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+   F    +  F+   + +D S D FIRTT ++H    + LW K+  KGDIY G Y G
Sbjct: 302 VSPYDFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEG 361

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNP----------VQWMEEEGYFFRLSAYQDKL 176
           WYS+ DE++     +  G D        NP          V W+ EE Y FRLSA++++L
Sbjct: 362 WYSISDESFLTPQNITDGVD-----KDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERL 416

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L +Y ++P  I+P  RR EVI  V+ GL DLS+SRK     +W I +P +P + +YVW+D
Sbjct: 417 LEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLD 476

Query: 234 ALTNYLTTTGYLDNPDGSKAKF---------WPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ALTNYLT +    +  G +            +PAD+HVIGKDIL+FHAIYWPAFLLSA L
Sbjct: 477 ALTNYLTGSRLRVDESGKEVSLVDDFNELERFPADVHVIGKDILKFHAIYWPAFLLSAGL 536

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           PLPKK+ +HG+     +KISKSLGNV DP+E  EE G DAL+YFL+RE     DG Y   
Sbjct: 537 PLPKKIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDK 596

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +  R+N +LA+ +GNLV R  S  + + +G  P+P A+TE DES++ +   +       
Sbjct: 597 NMIARLNGELADTLGNLVMRCTSAKI-NVNGEWPSPAAYTEEDESLIQLIKDLPGTADHY 655

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                I +A+  V  ++  ++ Y     PW+L KT+P+R  TVLY+T+E +R   +LL  
Sbjct: 656 YLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTDPERLRTVLYITLEGVRVTTLLLSP 715

Query: 465 FVPKLANKIFDILFVADENR 484
            +P+ +  IFD+L V + +R
Sbjct: 716 ILPRKSVVIFDMLGVPEVHR 735


>gi|18311506|ref|NP_563440.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|25009370|sp|Q8XHG1|SYM_CLOPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18146190|dbj|BAB82230.1| methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 645

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/473 (41%), Positives = 300/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K + G+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471


>gi|289547973|ref|YP_003472961.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181590|gb|ADC88834.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 489

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/510 (40%), Positives = 307/510 (60%), Gaps = 29/510 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y++T I Y N  PHIGHAY  + AD LARF+R+ G +V F TGTDEHG KI K A+  
Sbjct: 2   KFYVTTPIYYVNDVPHIGHAYTTVAADTLARFYRMRGYEVFFLTGTDEHGLKIQKTAEEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  K   DQN+ NF ++   ++ISYD FIRTT+  H +  R +++K  ++GDIY G Y 
Sbjct: 62  GVHPKDLADQNASNFMELWRFMNISYDRFIRTTDPDHQEVVREMFQKSWERGDIYLGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E+    +G+       P +++ E  YFFRLS YQ+ LL  YE  P+
Sbjct: 122 GWYCVGCEEFKSESEL---LEGKLCPLHLKPCEYVREPSYFFRLSKYQEALLKLYEEMPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           F+ P  R  EV+SFV  GL+DLS++R      WGI++P D ++ +YVW DAL NY++   
Sbjct: 179 FVRPEHRLREVVSFVSMGLRDLSVTRPASRVRWGIRVPFDEEHTIYVWFDALFNYVSAVR 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                   +   WPADLH++GKDILRFHA+YWPAFL+S  L +P+ VF+HG+   +G+K+
Sbjct: 239 -------ERMHLWPADLHLVGKDILRFHAVYWPAFLMSVGLDIPRTVFAHGWWKVEGQKM 291

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+ P+++++E G+D +RYFL+R++  G DG   +D + KR+N +LAN IGNLVS
Sbjct: 292 SKSLGNVVSPVDLVKEYGLDPVRYFLLRDMPFGDDGDLRRDNILKRINGELANEIGNLVS 351

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +SM+LK   G      A    D     VC   ++   E M     + AL +V+   S 
Sbjct: 352 RVLSMVLKYTQG-----KATGGKDAQYEKVCGETIKRYEELMGRVDFYNALEEVLKFSSY 406

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +++Y D++ PW++ K        VLY  V+    +  LL  FVP+   K+   + +    
Sbjct: 407 LNKYVDSKAPWQMAKVGDPSLDDVLYTLVDGCFVVGYLLYPFVPQSMEKLMQAIGI---- 462

Query: 484 RCFQSLDQRLKP----GFMLHKTFDPIFPR 509
              + L Q+++P    G+ + +  + +FPR
Sbjct: 463 ---EKLPQQIRPYSFAGYTVREKVN-LFPR 488


>gi|282896532|ref|ZP_06304552.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281198638|gb|EFA73519.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 533

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/484 (41%), Positives = 302/484 (62%), Gaps = 13/484 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  I AD +ARF RL G +V+F TGTDEHGQKI ++
Sbjct: 6   KTSKTFALTTPLYYVNDVPHIGSAYTTIAADTMARFQRLLGNEVIFITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ+ G + + F DQ   +F D+  +L+I YD F RTT+ +H    +  + ++ ++GDIY+
Sbjct: 66  AQSQGKSPQEFCDQIVPSFIDLWQILNIQYDRFSRTTDLKHQAIVKEFFNRVWEQGDIYR 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G     +  +   V+W +E+ YFFRLS YQ  L  +Y+
Sbjct: 126 GEQKGWYCVSCEEFKEERELIEGKRCPIHTTKE--VEWRDEQNYFFRLSKYQKPLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT- 240
           SHP FI P  RRNEV+SFV  GL+D S+SR   DWG  +P D ++ +YVW DAL  Y+T 
Sbjct: 184 SHPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTEHTLYVWFDALLGYITA 243

Query: 241 -----TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
                T   L+N   + +K+WP +LH+IGKDILRFHA+YWPA L+SANLPLP++VF HGF
Sbjct: 244 LLEPGTEATLEN---AVSKWWPINLHLIGKDILRFHAVYWPAMLISANLPLPQQVFGHGF 300

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G+K+ K+LGN +DP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLA
Sbjct: 301 LTKDGQKMGKTLGNTVDPVALVKKYGSDAVRYYFLKEIEFGKDGDFNEIRFIHVLNADLA 360

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNL++R+++M+ K   G IP+        E+ L      L E  +   + L    +A
Sbjct: 361 NDLGNLLNRTLNMVKKYCAGEIPSIAPQDIPPENTLKTIGGQLGEKVKQAYSVLAFNEVA 420

Query: 416 Q-VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Q V+ LV   +++ D Q PW L K+   ++ +TVLY  +E +R  A LL   +P +++ I
Sbjct: 421 QAVMLLVQTSNKFIDEQAPWSLYKQGKQNQVATVLYTVLESVRLAAYLLSPIIPNISSDI 480

Query: 474 FDIL 477
           +  L
Sbjct: 481 YQQL 484


>gi|315654035|ref|ZP_07906951.1| methionine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315488731|gb|EFU78377.1| methionine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 659

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 319/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGWVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAEGLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|168213448|ref|ZP_02639073.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170715012|gb|EDT27194.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 645

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/473 (41%), Positives = 300/473 (63%), Gaps = 7/473 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGNCPDC----GRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++ F++ GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K + G+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKI 471


>gi|224541065|ref|ZP_03681604.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525989|gb|EEF95094.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM
           15897]
          Length = 642

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/487 (42%), Positives = 315/487 (64%), Gaps = 19/487 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+ +  Y++TAI Y + +PHIG+ YE++++D + R  R  G +V F TGTDEHGQKI  
Sbjct: 1   MKDPKDFYLTTAITYTSGKPHIGNTYEIVLSDAICRAKRQQGYNVRFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  K +VD+ +   + + D++D++YD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAKEAGIEPKEYVDKVAAEVKRIWDMMDVTYDKFIRTTDEYHVKQVQKIFKKLHDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            G Y G Y    E+++ + ++  G      G+ ++A+        EE YFF+LS YQD+L
Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGKCPDCGGEVHDAK--------EEAYFFKLSKYQDRL 172

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YY  HPEFI P  R+NE+++ F+K GL+DL +SR +F W I +  DP++++YVWIDAL
Sbjct: 173 MQYYNDHPEFIQPESRKNEMVNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDAL 232

Query: 236 TNYLTTTGY-LD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
            NY+T  GY LD N D    ++WPAD+HVIGKDI+RFH IYWP  L++ +LPLPK+VF H
Sbjct: 233 VNYITGLGYDLDGNNDELFNRYWPADVHVIGKDIVRFHTIYWPIILMALDLPLPKQVFGH 292

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            ++L    K+SK LGNVI   ++++  GVDA+RY+L+ EI    DG    D L +R+N+D
Sbjct: 293 PWLLMGDSKMSKHLGNVIYADDLVDLFGVDAVRYYLLHEIPYDNDGSITWDLLVERINSD 352

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412
           LAN +GNLV+R+++M  K +DG++         D+ + S+ +  + E    ++N+  + +
Sbjct: 353 LANILGNLVNRTIAMCNKYFDGVVTNTNVCEPVDDELKSI-ALAMPEKTIKLENEFKLAK 411

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL ++  L+   ++Y D   PW L K  T  DR +TVLY  VE IR  AI L+ F+P  +
Sbjct: 412 ALDEIYVLLRRTNKYIDDTMPWTLAKDETKKDRLATVLYNLVEAIRFSAIALEPFIPGTS 471

Query: 471 NKIFDIL 477
            KI D++
Sbjct: 472 KKILDMI 478


>gi|262067595|ref|ZP_06027207.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378710|gb|EFE86228.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 640

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/514 (41%), Positives = 316/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 5   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE+RH    + + + +  KGDIYKG 
Sbjct: 65  QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHAKGDIYKGE 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   V  ++EE YFF++S Y D LL + + H
Sbjct: 125 YKGKYCVSCETFFPENQL-NGSNKCPDCGKELTV--LKEESYFFKMSKYADALLKHIDEH 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 182 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 241

Query: 244 YLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 242 F-ENDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP   I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 301 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G++       E D+ I ++    ++++ + M      RAL  +   +
Sbjct: 361 LNRTLGMYKKYFNGVVVASSTSEEIDDVIKTMFDETIKDVEKYMYLFEFSRALETIWKFI 420

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  T   R +TV+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 421 SRLNKYIDETMPWALAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 480

Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509
             +    +  D +     K G  L +   PIFPR
Sbjct: 481 DKDITSLKFDDIKEWNIFKEGHQLGEA-SPIFPR 513


>gi|323465759|gb|ADX69446.1| Methionyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 658

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/524 (39%), Positives = 319/524 (60%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    G+D LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMRALPFGADGIFTPEDFIERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG   P P A  +  + +    + V+ +  E M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQGAPVPVAQDKFGKDLQDTAASVIADYCEQMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K+   D  S V+    E +R +AI++   + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480

Query: 472 KIFDILFVA-----DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +       +N  F       K    + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTK----VVEKPKPIFPRL 520


>gi|166031337|ref|ZP_02234166.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC
           27755]
 gi|166028742|gb|EDR47499.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC
           27755]
          Length = 648

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/483 (42%), Positives = 309/483 (63%), Gaps = 18/483 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 7   KGKYYITTAIAYASGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKAD 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T K FVD  +R  + + D+++ SYD FIRTT++ H    + ++K++ D+GDIYK  
Sbjct: 67  EAGITPKQFVDNAAREIKKIWDLMNTSYDKFIRTTDEDHEAQVKKIFKRLYDQGDIYKSS 126

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +      +  +EE YFFR+S Y D+L+ Y  +H
Sbjct: 127 YEGMYCTPCESFWTESQL---VDGKCPDCGRE-CKPAKEEAYFFRMSKYADRLIDYINTH 182

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE++ +F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  
Sbjct: 183 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITGI 242

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG+      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L 
Sbjct: 243 GY--DCDGNSTEQFKKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 301 GDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 360

Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESI----LSVCSRVLQEIRENMQNQLIHRA 413
           GNLV+R++SM  K + G +   G A TE D+++     ++     + +   M    +  A
Sbjct: 361 GNLVNRTISMTNKYFGGTVTNKGVAETEEDKAVDADLKAITEDTPKRVEAKMDELRVADA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + ++  L    ++Y D   PW L K     DR  TVLY  +E I+  A LL++F+P+ + 
Sbjct: 421 ITEIFVLFKRCNKYIDETMPWALAKEEAKKDRLETVLYNLIESIKTGARLLESFMPETSE 480

Query: 472 KIF 474
           KI 
Sbjct: 481 KIL 483


>gi|33303703|gb|AAP22259.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 410

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/410 (46%), Positives = 285/410 (69%), Gaps = 10/410 (2%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           IGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +
Sbjct: 1   IGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIK 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND--- 138
           ++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +   
Sbjct: 61  ELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQL 120

Query: 139 -DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            D + +G     G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+N
Sbjct: 121 VDPIMEGDKVVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKN 179

Query: 195 EVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           E+I+ F+K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    
Sbjct: 180 EMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEQMYK 239

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP
Sbjct: 240 KFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDP 299

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K +
Sbjct: 300 VTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYF 359

Query: 374 DGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +G IP      TE DE++++     L+++ E M+N     AL+ +  LVS
Sbjct: 360 NGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVS 409


>gi|300173823|ref|YP_003772989.1| methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888202|emb|CBL92170.1| Methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 703

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/523 (40%), Positives = 324/523 (61%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VQKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+    ++D  ++  +D+  ++DISYDDFIRTTE+RH    + ++  + + GDIY
Sbjct: 93  KAKAEGIPEINYLDGMAKGIKDLWQLMDISYDDFIRTTEERHEKAVQKIFTTLLENGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+ AD +    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDADDKMIGGKAPSGHDVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+ F+  GL+DL+++R   DWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGISVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY         KFWPA++ ++GK+I+RFH IYWP  L +  + LPK V  H
Sbjct: 273 ALSNYITALGYDSENTDLFEKFWPANVQLVGKEIVRFHTIYWPIMLHALGIELPKSVIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G+++ K  K+SKS GNVI P EV+EE  G+DA+RY+L+R +  G DG +  +    RVN 
Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K  +G+IP      T+ DE+++      + +  +N Q+    
Sbjct: 392 DLANDLGNLLNRTVAMINKYENGVIPELRTGKTDFDEALVRTSEDAITDYHKNFQDMRTA 451

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  + +++   ++Y D  +PW L K +  +A  S V+      +R +A+LLQ  + K 
Sbjct: 452 DALENIWTIIRRANKYIDETQPWVLAKDDTQKAVLSNVMAHLAGALRVVAVLLQPVLTKA 511

Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
             KI++ L F   EN  R       +L  G  + K  +PIFPR
Sbjct: 512 PKKIYEQLGFEYPENGVRIAGLTFGKLPTGGTVVKKGEPIFPR 554


>gi|259501900|ref|ZP_05744802.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170077|gb|EEW54572.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 674

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/519 (40%), Positives = 313/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI + A
Sbjct: 4   QKPTYYITTPIYYPSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  + +VDQ +   + +   L I+ D FIRTT+  H    + +++K  D+GDIYKG
Sbjct: 64  DKLGMQPQEYVDQMAAGIKQLWQTLKITNDKFIRTTDDYHERAVQKIFQKFLDQGDIYKG 123

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ ++EE YFF++S Y D L
Sbjct: 124 EYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMSKYADWL 183

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YY+ HP+FI P  R NE+++ F+K GL+DL+++R +F+WG+K+P+DPQ+++YVWIDAL
Sbjct: 184 MKYYQDHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPQHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG+
Sbjct: 244 SNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  K  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DLA
Sbjct: 304 LTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K  +G I  T  A T  D  +    ++ + E ++ M       AL
Sbjct: 364 NDLGNLLNRTVAMINKYQNGRIQGTNDAQTAYDADLEDTAAQAVAEYKQEMDKTHFADAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  LVS  ++Y D  +PW L K +  +A  S V+    + +R +A LLQ  +P    +
Sbjct: 424 AAVWKLVSRANKYIDETEPWVLAKDDSKQAELSDVMTHLAKSLRVIAALLQPVMPDAPKE 483

Query: 473 IFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           I   L +  E      LD    P    +     PIFPR 
Sbjct: 484 ICRQLGLPAEAISLTDLDFNDFPASSQVVAKGTPIFPRL 522


>gi|153854787|ref|ZP_01996021.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814]
 gi|149752694|gb|EDM62625.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814]
          Length = 646

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/483 (42%), Positives = 310/483 (64%), Gaps = 18/483 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 7   KGKYYITTAIAYASGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKAD 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT K FVD  S   + + D+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG 
Sbjct: 67  EAGVTPKEFVDNASGEIKKIWDLMNTSYDKFIRTTDEDHEAQVKKIFKKLYDQGDIYKGA 126

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +      +  +EE YFF++S Y D+L++Y   H
Sbjct: 127 YEGMYCTPCESFWTESQL---VDGKCPDCGRE-CKPAKEEAYFFKMSKYADRLINYINEH 182

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE++ +F+  GL+DL +SR +F WGI +  DP++I+YVW+DALTNY+T  
Sbjct: 183 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHIVYVWLDALTNYITGI 242

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG+      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L 
Sbjct: 243 GY--DCDGNSTELFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 301 GDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 360

Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESI----LSVCSRVLQEIRENMQNQLIHRA 413
           GNLV+R++SM  K + G++   G A TE ++++     +V     + +   M    +  A
Sbjct: 361 GNLVNRTISMTNKYFGGVVTDKGVAETEEEKAVDADLKAVTEDTPKRVDAKMDELRVADA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + ++  L    ++Y D   PW L K     DR  TVLY  +E I+  A LL++F+P+ + 
Sbjct: 421 ITEIFVLFKRCNKYIDETMPWALAKDEAKKDRLETVLYNLIESIKAGAKLLESFMPETSE 480

Query: 472 KIF 474
           KI 
Sbjct: 481 KIL 483


>gi|255994854|ref|ZP_05427989.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993567|gb|EEU03656.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 614

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/452 (44%), Positives = 289/452 (63%), Gaps = 15/452 (3%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           +AD +AR+ RL G DV+F TGTDEHGQK+   A+ AG     ++D    N  D+ + ++I
Sbjct: 1   MADAMARYKRLQGFDVMFLTGTDEHGQKLQSVAEAAGKKPLEYIDPIVDNILDLWEKMEI 60

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           SYDDFIRTTE RH +  + ++ ++ + GDIYKG Y G Y    EAY+ D ++  G     
Sbjct: 61  SYDDFIRTTEPRHEERVKKIFMELYENGDIYKGEYEGMYCKPCEAYWTDSQLEDGCCPDC 120

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 PV+  +EE YFF+LS Y D+LLS YE++PE + P  RRNE+ISF+K GL DL +
Sbjct: 121 ----GRPVESAKEEAYFFKLSNYADRLLSLYENNPEMLQPESRRNEMISFIKQGLDDLCI 176

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDI 267
           SR +FDWGIK+P D  +++YVW+DALTNY+T  GY   PD  K   ++WP D+H++GKDI
Sbjct: 177 SRSSFDWGIKVPIDESHVIYVWLDALTNYITALGY---PDDRKLYDRYWPCDVHLVGKDI 233

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           +RFH+I WP+ L+S  LPLPKK+  HG++L  G K+SKS GNV+DP  +IE  G DAL+Y
Sbjct: 234 IRFHSIIWPSILMSLGLPLPKKILGHGWVLVGGGKMSKSKGNVVDPRVLIERYGTDALKY 293

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PG 381
           FL+RE   G DG Y+ + L KR+N+DLAN +GNL+SR+VSMI K  +  IP+        
Sbjct: 294 FLLREYTFGNDGPYEDETLIKRINSDLANDLGNLLSRTVSMIEKYKNAKIPSVPTEKLSE 353

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            +  +   +L++      ++ E M     ++AL  + +L+S  ++Y D  +PW L K N 
Sbjct: 354 NYEAATSELLNLAKGTATKVEEAMDEFAFNKALEAIWTLISRANKYIDQTQPWNLAKDNA 413

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                VL+   EV+R ++IL+  F+   + +I
Sbjct: 414 MELDGVLHNLAEVLRMVSILIYPFMHTSSEEI 445


>gi|296273248|ref|YP_003655879.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296097422|gb|ADG93372.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 648

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/477 (41%), Positives = 313/477 (65%), Gaps = 10/477 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   + +YI+T I Y N   HIGHAY  IIAD+LAR+ RL G    F TGTDEHGQKI +
Sbjct: 1   MNCHKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGKKTFFLTGTDEHGQKIEE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G T+K + D+ S  FR + D  DI+YD FIRTT++ H    +  ++K+ +KGDIY
Sbjct: 61  SAKLRGKTSKEYADEVSGKFRALWDDFDITYDKFIRTTDEEHKTGVQFAFEKMFNKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y +  E ++ + ++    + ++      P   ++EE YFF+LSAY+DKLL +Y
Sbjct: 121 KGEYEGYYCVSCETFFTEKQL---IEDEFCPDCGKPTNIVKEESYFFKLSAYEDKLLKWY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTN 237
           E +P+ ILP  ++NE+I+FVKSGL+DLS+SR +FDWG+K+P+   +P+++MYVW+DAL N
Sbjct: 178 EENPDCILPRSKKNEIINFVKSGLRDLSISRTSFDWGVKLPESLNEPKHVMYVWLDALLN 237

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y+T  GY    D    ++WPA++ ++GKDILRFHAIYWPAFL+S +LPLPK + +HG+  
Sbjct: 238 YITALGY--GNDDKNMEYWPANIQLVGKDILRFHAIYWPAFLMSLDLPLPKHIAAHGWWT 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKS GNV++P EV +  G+DA RYF++RE+  G+DG + +  L  R+N+DL N 
Sbjct: 296 RDGDKMSKSKGNVVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALMDRINSDLGND 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL++R + M  K ++  + T     +  +  L   + +L  I   + N  ++R L ++
Sbjct: 356 LGNLLNRIIGMSGKYFEYKV-TSKDVVKFHQKELDEVNEILSGIEGYIYNMQLNRYLEEI 414

Query: 418 ISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++  ++     +PW ++K+   D A  ++ +   ++ ++A+LL + +P+  +KI
Sbjct: 415 WKVLTIANKAIGDYEPWTKMKEGKADEAMALVSLITNIMAKVALLLDSVMPEKISKI 471


>gi|241896681|ref|ZP_04783977.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
 gi|241870162|gb|EER73913.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
          Length = 667

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/519 (39%), Positives = 313/519 (60%), Gaps = 11/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP+ + HIG+ Y  ++AD  AR+HRL   DV F TGTDEHG KI + 
Sbjct: 3   EEKKTFYITTPIYYPSGKLHIGNTYTTVLADAAARYHRLLNEDVYFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   ++ K +VDQ + + + +   L+IS D FIRTT+  H    + +++K  D+GDIYK
Sbjct: 63  AEKLNISPKEYVDQMAADIQKLWSDLEISNDGFIRTTDDYHEKAVQKIFQKFLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++EE YFF +S Y D 
Sbjct: 123 GQYEGWYSVDDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVELVKEESYFFNMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YY++HP FI P  R NE+I +F++ GL+DL+++R  F WG+ +  DP +++YVWIDA
Sbjct: 183 LLDYYKTHPNFIQPSARMNEMIKNFIEPGLEDLAVTRTAFKWGVPVASDPDHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY+ +      K+WPA++H++GK+I+RFH IYWP  L +  L LP+ +  HG
Sbjct: 243 LSNYITKLGYMSDDTTMFDKYWPANVHLVGKEIVRFHTIYWPIMLHALGLELPETIVGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNV+ P  + +  G+DA+RY+L+R +  G DG +  +    ++N DL
Sbjct: 303 WLTMRDGKMSKSKGNVVYPDTLADRYGIDAVRYYLLRAMPFGNDGIFTPEDFVSKLNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  DG+IP      T+ D  ++      +     NMQ+     A
Sbjct: 363 ANDLGNLLNRTVAMINKYEDGVIPELNTGLTDFDRELVQTAQDTIATYNANMQSMHTADA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA +  L+S  ++Y D   PW L K  +  D  ++V+      +R +AILLQ  + +   
Sbjct: 423 LAAIWQLISRANKYIDETTPWTLAKDDSQADVLASVMAHLAAALRVVAILLQPILTQAPQ 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           KIF  L + D N     L  + L  G  + +   PIFPR
Sbjct: 483 KIFQQLGLQDSNVQISELQFEDLPTGGKVVEKGQPIFPR 521


>gi|307691530|ref|ZP_07633767.1| methionyl-tRNA synthetase [Ruminococcaceae bacterium D16]
          Length = 655

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/493 (42%), Positives = 306/493 (62%), Gaps = 12/493 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER++ YI+T I YP+ + HIGH Y  +  D +AR+ RL G DVLF TGTDEHGQKI   A
Sbjct: 2   ERKRFYITTPIYYPSDKLHIGHTYCTVATDAMARYKRLCGYDVLFLTGTDEHGQKIEDKA 61

Query: 63  QNAGVTTKVFVDQ---NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + AGV+ K FVD+     R   D+  +++IS D FIRTT+  H    + ++KK+ +KGDI
Sbjct: 62  KEAGVSPKEFVDKIVTGERGVLDLWKLMNISNDRFIRTTDDYHVSAIQKIFKKMYEKGDI 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y    E+++ + ++    DG+  +     VQ  +EE YFFRLS Y D++   
Sbjct: 122 YKGEYVGKYCKPCESFWTESQL---VDGKCPDCGRE-VQDAKEEAYFFRLSKYADRIQHL 177

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            E   +F+ P  R NE+++ F+K GL+DL +SR +F WG+ +  DP +++YVW+DAL NY
Sbjct: 178 LED-TDFLEPRSRVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDFDPGHVVYVWVDALFNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            T  G+L++      KFWPAD+H +GK+I+RFH+I WPA L+S ++PLPKKVF HG++L 
Sbjct: 237 TTALGFLNDKYDDYEKFWPADVHFVGKEIVRFHSIIWPAMLMSMDMPLPKKVFGHGWLLL 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+DP  + E  GVDALR+FL+R    G DG +  + L   +N DLAN +
Sbjct: 297 DGGKMSKSKGNVVDPYILAERFGVDALRFFLLRTFPFGSDGNFSNEALINTINVDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL+SR+VSM+ K ++G +P        DE + ++ S +     E M++     AL+++ 
Sbjct: 357 GNLLSRTVSMVGKYFNGTLPKERQSDALDEELTAMVSALRGRYEEQMEHYAFQNALSEIF 416

Query: 419 SLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++S  ++Y D   PW L K    N  R +TV+Y  +E +R  AILL  F+P  A +I  
Sbjct: 417 KVISRANKYIDENAPWVLAKDMEANGVRLATVMYNLLETLRVCAILLTPFIPTSAAEILR 476

Query: 476 ILFVADENRCFQS 488
            +   D    ++S
Sbjct: 477 QIGACDACSTWES 489


>gi|139438655|ref|ZP_01772139.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
 gi|133775735|gb|EBA39555.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
          Length = 533

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/534 (40%), Positives = 313/534 (58%), Gaps = 29/534 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   +I+T I Y NA PH+G AY  IIADV AR+ R  G +V F TG DEHG+K+A+A
Sbjct: 3   QSKPSFFITTPIYYVNADPHLGTAYSTIIADVQARYRRSAGYNVKFLTGMDEHGEKVAEA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T + + D  + +F+++ + L+IS DDFIRTTE R H   + LW+++ + G +YK
Sbjct: 63  AAKHNMTPQEWTDSQAPHFKELWNKLEISNDDFIRTTEPRQHHAVQYLWERMKESGYLYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQ-HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWY + DE Y+ D +V KG +     GQ+     H P++ ++EE YFF+LSA+QDK
Sbjct: 123 GSYDGWYCVPDETYFTDTQVQKGDEEYGSVGQHLCPDCHRPLERVQEESYFFKLSAFQDK 182

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  Y+ HP+F+ P  R NEV SFV+ GL DLS+SR +FDWGI++P D  ++ YVW DAL
Sbjct: 183 LLKLYDEHPDFVEPAFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDEGHVTYVWFDAL 242

Query: 236 TNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            NY+T  GY  + D ++A+    WPA  H++GKDI+RFH + WPA L++    LP+ VF+
Sbjct: 243 LNYMTAVGYGVDTDEARAELSYRWPAQFHIVGKDIIRFHCVIWPAMLMAIGEALPEHVFA 302

Query: 293 HGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           HGF+        K EK+SKS GN I P +VI+ +GV+  RY+ + ++  G DG    D +
Sbjct: 303 HGFLTVRNAETGKAEKMSKSRGNAIAPQDVIDMLGVEGYRYYFMTDVVPGTDGAISFDRM 362

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENM 405
           ++  NADLAN  GNL+SRS++M  K +DG  P  P +F   D  +  +   +++     M
Sbjct: 363 EQVYNADLANSWGNLISRSLNMSAKYFDGCAPAKPASFDAFDNPLAKIADGLVERYMAKM 422

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQ 463
                  A  +V+ L+   + Y +  +PW L K     D  + V+Y  +E IR  A LL 
Sbjct: 423 DVLDYGGAKDEVMELIHAANHYIEDSEPWALAKDEAKADELAFVIYNLLEAIRIAAHLLM 482

Query: 464 AFVPKLANKIFDILFVADENR-------CFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +P+ + +    L   DE         C   L   L  G  + K  DP+FPR 
Sbjct: 483 PLMPQTSAEALRRLSCEDEAASDDLKGICAWGL---LAGGQPVEKG-DPLFPRL 532


>gi|294782393|ref|ZP_06747719.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481034|gb|EFG28809.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 637

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/514 (41%), Positives = 316/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE+RH    + + + + +KGDIYKG 
Sbjct: 62  QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   V  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKELTV--LKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP   I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G++    A  E D+ I ++    ++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGIVVASSASEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWRFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  T   R + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWALAKDETKKARLAAVMNILSEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509
             +    +  + +     K G  L     PIFPR
Sbjct: 478 EKDITSLEFDEIKEWNIFKEGHQLGNA-SPIFPR 510


>gi|300814290|ref|ZP_07094562.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511557|gb|EFK38785.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 653

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/513 (41%), Positives = 315/513 (61%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGH Y  + AD + RF  L G +V FTTGTDEHGQKIA  AQ
Sbjct: 2   KKNFYLTTPIYYPSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K +VD+   N + + + LDI YD FIR+T+ +H    + L+KK+ DKGDIYKG 
Sbjct: 62  EAGMEPKAYVDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y    E+++   +V    D           Q  +EE YFFRLS Y+DKLL    ++
Sbjct: 122 YEGYYCTPCESFWTQAQV---GDDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNN 178

Query: 184 PEFILPIERRNEVI-SFVKS--GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            EF  P  R+NE+I +F++S  GL+DLS+SR +  WG+++P D ++++YVWIDAL  YL+
Sbjct: 179 EEFTEPAFRKNELIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLS 238

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              +    D  K  +FWPAD+H++GK+I RFHA+ WPA L++ +LPLPKK+F HG+IL  
Sbjct: 239 AIEF--GTDKEKFNEFWPADVHLVGKEIFRFHALIWPALLMALDLPLPKKIFGHGWILFD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNV+ P  +I+  GVDAL+YFL+RE + G DG + K+   +R+N+DLAN +G
Sbjct: 297 NDKMSKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+VSMI K  DG+I  P    E D+ + ++   V  ++ E M++   + AL ++  
Sbjct: 357 NLLSRTVSMITKYNDGIIEKPNREEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWK 416

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K   N DR +TVLY   E +R +++L+  F+   + +I   L
Sbjct: 417 LIRRSNKYVDETTPWILAKDEKNKDRLNTVLYNLAESLRIISVLINPFITNTSKEIIRQL 476

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + ++     S    L P          IFPR 
Sbjct: 477 GLEEKVDWESSQKWGLIPNATKVNKGQIIFPRL 509


>gi|148543447|ref|YP_001270817.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152856|ref|YP_001841197.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227363597|ref|ZP_03847714.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325681791|ref|ZP_08161310.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530481|gb|ABQ82480.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224200|dbj|BAG24717.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071393|gb|EEI09699.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978882|gb|EGC15830.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 675

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/520 (40%), Positives = 318/520 (61%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLMGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  + +VDQ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIYK
Sbjct: 63  AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EEE YFF++S Y + 
Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYANW 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+I+ F+K GL+DL+++R +F+WG+K+P DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFNWGVKVPSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK +  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHIIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +G ++ T  A T+ D  +    S V+ E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLVGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K  +  D  S V+    + +  +A L+Q  +P    
Sbjct: 423 LATVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLWIIAALIQPIMPHAPK 482

Query: 472 KIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +I + L +   +     L     P    +     PIFPR 
Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522


>gi|187251862|ref|YP_001876344.1| methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186972022|gb|ACC99007.1| Methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 500

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/521 (40%), Positives = 311/521 (59%), Gaps = 42/521 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y NA PHIGH+Y  +  D+++R+ R  G +V F TGTDEHG  I KAA+ 
Sbjct: 3   KKFYITTPIYYVNAYPHIGHSYTTLACDIVSRYKRSRGEEVHFLTGTDEHGINIEKAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++ K + DQ    ++++  +LDI YDDFIRTT+KRH +T + +++ +  KGDIY G Y
Sbjct: 63  AGMSPKAWCDQVVDAYKELWKILDIKYDDFIRTTDKRHEETVQQIFEILIAKGDIYLGHY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y    EAY ++ E  +G           P+  ++EE YFF+LS YQD LL +YES+P
Sbjct: 123 SGMYCNSCEAYMDETEAPEGI----CPIHKKPLTEVKEETYFFKLSKYQDALLKFYESNP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  R  E+ +FVKSGLKDLS++R    WGI +  +P++ +YVW DAL NY +  G 
Sbjct: 179 SFLNPKFRSAEITNFVKSGLKDLSVTRTKVAWGIPVKSNPKHTIYVWFDALINYASAAGL 238

Query: 245 LDNPDGSKAKF---------------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
             N    K  F               WPAD+H+IGK+I RFH + WPA L++  +P PKK
Sbjct: 239 GLNICEDKEFFKEELKKVGLNSFEDVWPADVHLIGKEIARFHMVIWPAMLMALGIPTPKK 298

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           VF+HG+   +GEK+SK+LGN++DP +V +E G+D LR+FL RE+  G DG +  D   KR
Sbjct: 299 VFAHGWWTVEGEKMSKTLGNIVDPKKVADEYGLDPLRFFLFREVPFGADGDFSMDSFIKR 358

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            NADLAN +GNL+SR+++M +K   G +P  G   E    +L   + V + + E+M    
Sbjct: 359 YNADLANDLGNLLSRTLNMAVK--YGDLPAEG---EYKSPLLVKAANVDKAVEEHMSELA 413

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + + L  V SL+ +++RY D  KPW L KT+   A  V+   +  +R++A+ ++ F+P  
Sbjct: 414 LDKTLEAVWSLIGDMNRYIDETKPWALAKTDEAAAKNVIIDLIHALRKVAVWVEPFMPAT 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                              + +RL PG +  + + P+FPR 
Sbjct: 474 G----------------AEMKKRLAPGPV--QKYAPLFPRL 496


>gi|310689727|pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With
           Methionyladenylate And Pyrophosphate
          Length = 564

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/500 (41%), Positives = 298/500 (59%), Gaps = 17/500 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+
Sbjct: 22  MKKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAE 81

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   GV+   F    S  F+     ++   + FIRTT   H    + +WKK++ KGDIY
Sbjct: 82  AAAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIY 141

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++
Sbjct: 142 LGKYEGWYSVSDESFLTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRER 201

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWI 232
           LL Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+
Sbjct: 202 LLKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWL 261

Query: 233 DALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           DAL NY T        DG++           WPAD+HV+GKDIL+FHAIYWPAFL+SA L
Sbjct: 262 DALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAEL 321

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           PLP+++ SHG+     +KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y   
Sbjct: 322 PLPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDK 381

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +   
Sbjct: 382 NMVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHY 440

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                I  AL  +  ++  ++ Y     PW+L K +  R  TVLYVT+E +R   + LQ 
Sbjct: 441 YCLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQP 500

Query: 465 FVPKLANKIFDILFVADENR 484
            +P+ A +I D L V +  R
Sbjct: 501 VMPQKAKEIMDALGVPEAAR 520


>gi|167755124|ref|ZP_02427251.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402]
 gi|237733450|ref|ZP_04563931.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167705174|gb|EDS19753.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402]
 gi|229383485|gb|EEO33576.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 643

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/486 (41%), Positives = 311/486 (63%), Gaps = 21/486 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAI Y + +PHIG+ YE+I+AD +ARF R +G +V F TGTDEHGQKI  
Sbjct: 1   MKNEKDYYLTTAITYTSGKPHIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  K FVD+ +   + + D++D +YD F+RTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAKEAGIPPKQFVDEKAGEVKRIWDLMDTTYDRFMRTTDDYHKSQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            G Y G Y    E+++ + ++  G      G+ ++A+        EE YFF+LS Y D+L
Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGKCPDCGGEVHDAK--------EEAYFFKLSKYADRL 172

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + + E+HPEFI P+ R+NE+++ F+K GL+DL +SR +F W I +  DP++++YVWIDAL
Sbjct: 173 IEHIETHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDAL 232

Query: 236 TNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           +NY+T  GY  + DG+      K+WPADLH+IGKDI+RFH IYWP  L++ ++PLPK+VF
Sbjct: 233 SNYITGLGY--DVDGNHGELYQKYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVF 290

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            H ++L    K+SKS GNVI   ++++  GVDA+RY+++ EI    DG    D L +R+N
Sbjct: 291 GHPWLLQGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPYDNDGSITWDLLVERIN 350

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +DLAN +GNLV+R+++M  K + G++  P      D+ ++ +   + +++   M      
Sbjct: 351 SDLANVLGNLVNRTIAMSNKYFGGIVNNPKVTEAVDDELIEIALAMPKKVIGKMDEFKSS 410

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  + +L+   ++Y D   PW L K  T  DR +TVLY  +E IR  AI L  ++P  
Sbjct: 411 DALDAIFTLLRRTNKYIDETMPWALAKDETKRDRLATVLYNLIESIRFAAIALIPYMPST 470

Query: 470 ANKIFD 475
           ANKI D
Sbjct: 471 ANKILD 476


>gi|256371339|ref|YP_003109163.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007923|gb|ACU53490.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 503

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/467 (43%), Positives = 292/467 (62%), Gaps = 9/467 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y N  PH+G AY +I+AD +AR+HRL G +V F TGTDEHG KIA++A+  
Sbjct: 3   RFYITTPIFYVNGDPHLGTAYAVILADAIARWHRLIGDEVRFVTGTDEHGLKIAQSAEAH 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ + +VD  S  FR   D L++SYDDFIRTTE RHH + +   ++I D+GDIY G Y 
Sbjct: 63  GVSPQAWVDVTSAQFRRAWDALEVSYDDFIRTTEPRHHRSVQRFLERIHDRGDIYLGTYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +R EAYY   E+     G+     H   + M EE YFF LS YQD+LL +YE HPE
Sbjct: 123 GLYCVRCEAYYQPGELEP---GELCPVHHVACERMREENYFFALSRYQDRLLEHYERHPE 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            I P  RRNEV+ F++ GL D+S++R + DWG+++P D +++ YVW DAL NYLT  GY 
Sbjct: 180 AIWPESRRNEVLRFIEGGLTDISITRTSIDWGVRVPWDSRHVFYVWYDALVNYLTAIGYA 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           ++     A +WPA  H++GKDILRFHA++WPA  L+A +  P ++   G++L++GEK+SK
Sbjct: 240 ED-SAEVAAWWPAAHHLLGKDILRFHAVWWPAMCLAAGIDPPAQLIVTGWLLNEGEKMSK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N IDP+ V   +  DALR++LVR  A G D     + L    NA+LANG GNLV+R 
Sbjct: 299 SLANQIDPLGVQRALSADALRHYLVRSSAIGPDWDVSLEALVALYNAELANGFGNLVARV 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            S+I++   G +P   A T  DE  +   +  ++ +R   +    + A+   I LV  ++
Sbjct: 359 GSLIVQRLGGHVPDAPA-TPPDELAI---AETIEAVRAGWERWRPNDAMDAAIGLVHRLN 414

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            Y +A +PW L K + + A++VL    E  R  ++LL   +P  A +
Sbjct: 415 AYLEATEPWRLAKGSAE-AASVLGTAREGARLASVLLSPAIPDGAER 460


>gi|260494223|ref|ZP_05814354.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198369|gb|EEW95885.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 636

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/514 (41%), Positives = 318/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTYFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    R +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N +    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDEKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G++         D+ I S+ + V++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGVVVASSTAEPIDDEIKSMFNDVIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  T   R +TV+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWSLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509
             +    +  D +     K G  L +   PIFPR
Sbjct: 478 NKDITNVKFDDIKGWDIFKAGHKLGEA-SPIFPR 510


>gi|254977164|ref|ZP_05273636.1| methionyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094494|ref|ZP_05323972.1| methionyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255316245|ref|ZP_05357828.1| methionyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518906|ref|ZP_05386582.1| methionyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652085|ref|ZP_05398987.1| methionyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685058|ref|YP_003216343.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260211221|emb|CBA66728.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214733|emb|CBE07412.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 645

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/475 (42%), Positives = 293/475 (61%), Gaps = 7/475 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A 
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG 
Sbjct: 63  EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++ +G        +   V+   EE YFFRLS Y+D+L   ++  
Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             F  P  R+NE+++ F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T  
Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +K
Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K  +G+IPT    T+ D  +        +     M     H AL  V  LV 
Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++Y D   PW L K  T  D   TVLY   E IR +A L+   + + ANKI++
Sbjct: 419 RTNKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYE 473


>gi|170782642|ref|YP_001710976.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157212|emb|CAQ02395.1| putative methionyl tRNA synthetase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 528

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/484 (42%), Positives = 300/484 (61%), Gaps = 9/484 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   E  YI+T I Y N  PHIGHAY  + ADVLAR+HR  G D  F TGTDEHGQKI +
Sbjct: 4   MSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQRGDDTWFLTGTDEHGQKILR 63

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A     T K + D+  + +++ + + +DIS DDFIRTT+ RH ++ ++  +++ D G I
Sbjct: 64  TATANDTTPKAWADRLVTESWQPLLEAVDISNDDFIRTTDARHEESVKVFLQRLHDAGFI 123

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDK 175
           Y G Y G+Y +  E Y    ++ +G    +GQ   A H+ PV+ +EE+ YFFR+S + ++
Sbjct: 124 YTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAIHSKPVELLEEKNYFFRMSDFGER 183

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL++YE  P+FI P   RNE++SFV+ GL+DLS+SR +FDWGI IP D  +++YVW +AL
Sbjct: 184 LLAFYEERPDFIQPESARNEILSFVRRGLEDLSISRSSFDWGIPIPWDESHVVYVWFEAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY  + D    + WPA  H++GKDILRFHA+ WPA L++     P++VF HG+
Sbjct: 244 MNYVTAIGYGVDDDAFHRR-WPA-THLVGKDILRFHAVIWPAMLMALGEEPPRRVFGHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P  + +  G+DA RY+ +R  A G+DG +  + L  R  A+LA
Sbjct: 302 LLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYYFMRAFAFGQDGSFSWEDLSARYQAELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR ++M+ + +DG IP     TE+D  + SV         + ++   IH +LA
Sbjct: 362 NGFGNLSSRVIAMVGRYFDGRIPEANELTEADLRVQSVARAAASTADDAIERLAIHESLA 421

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +LV E++ Y  +Q+PW L K + DRA   TVL+  V  +  LA+LL   +P    K+
Sbjct: 422 AVWTLVDELNGYITSQEPWALAKKDEDRARLETVLHTAVRGLGTLAVLLAPVLPGATAKL 481

Query: 474 FDIL 477
           +  L
Sbjct: 482 WTAL 485


>gi|269925297|ref|YP_003321920.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788957|gb|ACZ41098.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 528

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/521 (42%), Positives = 320/521 (61%), Gaps = 23/521 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+TAI Y NA+PHIG A E++  DVLAR+HRL G D  F TGTD++  K  +AA+  
Sbjct: 5   RYYITTAIPYVNAKPHIGFALELVQTDVLARYHRLIGDDTRFLTGTDDNALKNVQAAEAE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124
           G++TK  VD+N+  F+ + + L +S+DDFIRT+ EKRH D  + LW+     GDIYK  Y
Sbjct: 65  GISTKELVDRNAELFKALREPLAVSFDDFIRTSGEKRHIDGVQKLWRACQRSGDIYKRVY 124

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y+++E+  G   ++        + +EEE YFFRLS Y D+L+S  ES  
Sbjct: 125 KGLYCVGCEQFYSEEELVNGLCPEHLTRP----ELVEEENYFFRLSKYTDRLISIIESGE 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             ILP  RRNEV+SF++ GL+D S+SR   +   WGI +PDDP  +MYVW DAL NY+T 
Sbjct: 181 LRILPETRRNEVLSFIRRGLEDFSISRASSRARGWGIPVPDDPDQVMYVWFDALGNYITA 240

Query: 242 TGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             Y  + +  + ++W   P   HVIGK ILRFHA+YWPA LLSA  PLP  ++ H ++  
Sbjct: 241 LDYAYDGELYR-RYWLENPHRTHVIGKGILRFHAVYWPAMLLSAGEPLPTTIYVHEYLTI 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+KISKSLGNVIDPI ++E  G DALRY+ VRE++  +D  +  D L  R NADLAN +
Sbjct: 300 NGQKISKSLGNVIDPISIVERFGTDALRYWFVREVSRTEDTDFTWDRLVTRYNADLANDL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R+VSMI +  +G +P+P   T+ ++ +  +   + ++I + +    +  A+  + 
Sbjct: 360 GNLLNRTVSMIRRYREGKVPSPSDSTDLEQDLRQIAEGIPEKIYKYLDEFDLRAAITAIW 419

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            LV+  +RY +   PW L +   +       R  TVLY   E +R +A+ L  F+P  ++
Sbjct: 420 DLVTRANRYVEESAPWLLARQEKNGDGAASSRLDTVLYSLAESLRVIAVHLSPFLPLTSS 479

Query: 472 KIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509
           KI + L + AD    +  +     L+PG ++ +   PIFPR
Sbjct: 480 KILEQLGIGADSQTKWPDVAAWGGLQPGTLVGEP-KPIFPR 519


>gi|322498828|emb|CBZ33901.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 747

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/499 (41%), Positives = 297/499 (59%), Gaps = 17/499 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F++    ++   + FIRTT   H    + +WKK+  KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKECFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T        DG++           WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+      KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDRRKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENR 484
           +P+ A +I D L V +  R
Sbjct: 685 MPQKAKEIMDALGVPEAAR 703


>gi|291545198|emb|CBL18307.1| methionyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 647

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/477 (43%), Positives = 300/477 (62%), Gaps = 12/477 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE++  D +AR+ R+ G DV F TGTDEHG KI + A+
Sbjct: 3   KKPYYITTAIAYASRKPHIGNTYEVVFTDAVARYKRMQGYDVFFLTGTDEHGVKIEELAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G+T K  VD+     +D+  ++ ISYD FIRTT+ RH +  + ++KK+ D+GDIYK  
Sbjct: 63  SEGITPKEHVDKVVGEIQDICKLMHISYDGFIRTTDPRHEEVVQKIFKKLYDQGDIYKSE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   ++    DG+  +     VQ  +EE YF RLS YQ  L  Y E+H
Sbjct: 123 YEGMYCTPCESFWTPSQL---VDGKCPDCGRE-VQPAKEEAYFLRLSKYQQWLEEYIETH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI+P  ++ E+++ F+K GL+DL +SR TF WGI +  DP++++YVW+DAL+NY+T  
Sbjct: 179 PDFIVPEGKKKEMMNNFIKPGLQDLCVSRTTFQWGIPVTFDPKHVIYVWVDALSNYITAM 238

Query: 243 GYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY  +PDGS     K+WP D HVIGKDI+RFH+IYWP  L +  L LP+++F H +IL  
Sbjct: 239 GY--DPDGSSDQFKKYWPCDCHVIGKDIMRFHSIYWPVMLHALGLELPRQLFGHNWILFG 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNVI   +V++  GVDA RY+L+ E+  G DG    + L +R N DLAN +G
Sbjct: 297 EDKMSKSRGNVIYASDVVDAFGVDAARYYLLSEMPYGSDGSITYESLIERFNTDLANTLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R+++M  K + G+I    A    D  + +   + ++E+   M    +   L  VIS
Sbjct: 357 NLVNRTIAMAQKYFGGVIQPADAAEPVDADLRATALKTVEEVDRLMNQYRMADTLDAVIS 416

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           L    ++Y D   PW L K      R   VLY  +E IR LA+LLQ F+P+ A KIF
Sbjct: 417 LARRSNKYIDETMPWVLAKDEAQKPRLGAVLYNLLESIRFLAVLLQPFMPETAEKIF 473


>gi|255102750|ref|ZP_05331727.1| methionyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308571|ref|ZP_05352742.1| methionyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 645

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/475 (42%), Positives = 292/475 (61%), Gaps = 7/475 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A 
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG 
Sbjct: 63  EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++ +G        +   V+   EE YFFRLS Y+D+L   ++  
Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             F  P  R+NE+++ F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T  
Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +K
Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K  +G+IPT    T  D  +        +     M     H AL  V  LV 
Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTNFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++Y D   PW L K  T  D   TVLY   E IR +A L+   + + ANKI++
Sbjct: 419 RTNKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYE 473


>gi|225387105|ref|ZP_03756869.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme
           DSM 15981]
 gi|225046791|gb|EEG57037.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme
           DSM 15981]
          Length = 660

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/477 (42%), Positives = 306/477 (64%), Gaps = 11/477 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI + AQ
Sbjct: 6   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKRAQGCDVFFQTGTDEHGQKIEEKAQ 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV+ K FVD+ +   + + D+++ SYD FIRTT+  H    + ++K++ D+GDIYKG 
Sbjct: 66  AAGVSPKEFVDKAAEEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYDQGDIYKGY 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +     V+  +EE YFFR+S Y  KL+ +  +H
Sbjct: 126 YEGMYCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYAPKLIEHINAH 181

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++ F+  GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVTFDPKHVTYVWLDALTNYITGI 241

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY D   GS  +F   WPADLH+IGKDI+RFH IYWP FL++  + LPK+VF H ++L  
Sbjct: 242 GY-DCDGGSTEQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGVELPKQVFGHPWLLQG 300

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 301 DGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANILG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   GA    DE + +     ++++   M+   +  A+ ++ +
Sbjct: 361 NLVNRTISMSNKYFGGVVADKGAAEAVDEDLKATVLEAVKKVEAKMEQLRVADAITEIFN 420

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +    ++Y D   PW L K     DR +TVLY   E I   A LL+ F+P+ + KI 
Sbjct: 421 IFRRSNKYIDETTPWALAKDEAKKDRLATVLYNLSEAIAIGASLLEPFMPETSGKIL 477


>gi|148273554|ref|YP_001223115.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831484|emb|CAN02445.1| metS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 525

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/484 (43%), Positives = 302/484 (62%), Gaps = 9/484 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   E  YI+T I Y N  PHIGHAY  + ADVLAR+HR  G D  F TGTDEHGQKI +
Sbjct: 1   MSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQRGDDTWFLTGTDEHGQKILR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A     T + + D+  + +++ + + +DIS DDFIRTT+ RH ++ +I  +++ D G I
Sbjct: 61  TATAHDTTPQAWADRLVTESWQPLLEAVDISNDDFIRTTDARHEESVKIFLQRLHDAGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDK 175
           Y G Y G+Y +  E Y    ++ +G    +GQ   A H+ PV+ +EE+ YFFR+S + ++
Sbjct: 121 YTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAIHSKPVELLEEKNYFFRMSDFGER 180

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL++YE  P+FI P   RNE++SFV+ GL+DLS+SR +FDWGI IP D  +++YVW +AL
Sbjct: 181 LLAFYEERPDFIQPESARNEILSFVRRGLEDLSISRSSFDWGIPIPWDESHVVYVWFEAL 240

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY  + +  + + WPA  H++GKDILRFHA+ WPA L++     P++VF HG+
Sbjct: 241 MNYVTAIGYGVDDERFRRR-WPA-THLVGKDILRFHAVIWPAMLMALGEEPPRRVFGHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P  + +  G+DA RY  +R IA G+DG +  + L  R  A+LA
Sbjct: 299 LLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYHFMRSIAFGQDGSFSWEDLSARYQAELA 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR ++M+ + +DG IP     TE+DE +L+V         + +    IH ALA
Sbjct: 359 NGFGNLSSRVIAMVGRYFDGRIPAADGLTEADERVLAVARSAAATADQAIDRLAIHEALA 418

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +LV E++ Y  +Q+PW L K + DRA   TVL+  V  +  LA+LL   +P    K+
Sbjct: 419 AVWTLVDELNGYITSQEPWALAKKDEDRARLETVLHTAVRGLGTLAVLLAPVLPGATAKL 478

Query: 474 FDIL 477
           +  L
Sbjct: 479 WTAL 482


>gi|312870209|ref|ZP_07730340.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094232|gb|EFQ52545.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 674

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/519 (40%), Positives = 312/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI + A
Sbjct: 4   QKPTYYITTPIYYPSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  + +VDQ +   + +   L I+ D FIRTT+  H    + +++K  D+GDIYKG
Sbjct: 64  DKLGMQPQEYVDQMADGIKKLWKTLKITNDKFIRTTDDYHEQAVQKIFQKFLDQGDIYKG 123

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ ++EE YFF++S Y D L
Sbjct: 124 EYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMSRYADWL 183

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YYE HP+FI P  R NE+++ F+K GL+DL+++R +F+WG+K+P+DP++++YVWIDAL
Sbjct: 184 MKYYEEHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG+
Sbjct: 244 SNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  K  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DLA
Sbjct: 304 LTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K   G +  T  A T  D  +    ++ + E +E M       AL
Sbjct: 364 NDLGNLLNRTVAMINKYQGGQVQGTNDAQTAFDADLEETAAQAIAEYKEEMDKTHFADAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  LVS  ++Y D  +PW L K +  +A  S V+    + +R +A LLQ  +P    +
Sbjct: 424 AAVWKLVSRANKYIDETEPWVLAKDDSKKAELSDVMTHLAKSLRVIAALLQPVMPDAPKE 483

Query: 473 IFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           I   L + +E      L     P    +     PIFPR 
Sbjct: 484 ICRQLGLPEEAISLTDLAFNDFPASSQVVAKGTPIFPRL 522


>gi|146085927|ref|XP_001465394.1| methionyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134069492|emb|CAM67815.1| putative methionyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 747

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/499 (41%), Positives = 296/499 (59%), Gaps = 17/499 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F+     ++   + FIRTT   H    + +WKK+  KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T        DG++           WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+      KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDRRKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENR 484
           +P+ A +I D L V +  R
Sbjct: 685 MPQKAKEIMDALGVPEAAR 703


>gi|313898934|ref|ZP_07832461.1| methionine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956133|gb|EFR37774.1| methionine--tRNA ligase [Clostridium sp. HGF2]
          Length = 657

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/489 (41%), Positives = 313/489 (64%), Gaps = 13/489 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  YI+TAI Y + +PHIG+ YE+I+ D +AR+ R  G DV F TGTDEHGQKI + 
Sbjct: 6   KNKKPYYITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEK 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGVT K FVD+ +   R   D+++ SYD FIRTT+  H    + ++KK+ ++GDIYK
Sbjct: 66  AKEAGVTPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQGDIYK 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G Y    E+++ + ++    DG+  +    PV+   EE YFF L  Y  +L+ + E
Sbjct: 126 STYEGLYCTPCESFWTESQL---VDGKCPDCGR-PVEKASEEAYFFNLQKYAPRLIKHIE 181

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            HPEFI P  R+NE+I+ F+K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T
Sbjct: 182 DHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYIT 241

Query: 241 TTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           + G+  + DG+      K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++
Sbjct: 242 SLGF--DADGNHGELYQKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWL 299

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L    K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +R+N+DLAN
Sbjct: 300 LVGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLAN 359

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNLV+R++SM  K ++G+I  P    + D+ ++++     + + + M+   +  A+ +
Sbjct: 360 VLGNLVNRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDE 419

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +L+   ++Y D   PW L K     DR +TVLY  +E IR  A+LL +++P+ A KI 
Sbjct: 420 IFTLLKRCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRFSAVLLSSYMPETAEKIL 479

Query: 475 DILFVADEN 483
           + L  ++ +
Sbjct: 480 EELSTSERD 488


>gi|260102231|ref|ZP_05752468.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083972|gb|EEW68092.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328463921|gb|EGF35439.1| methionyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 658

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/524 (39%), Positives = 318/524 (60%), Gaps = 18/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++ F+K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    G+D LRY+L+  +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMHALPFGADGIFTPEDFIERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P P    +  + +    + V+ + RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVPVTQDKFGKDLQDTAASVIADYREQMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++  D   PW L K+   D  S V+    E +R +AI++   + + A 
Sbjct: 421 ALDSIWKLVARANKCIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480

Query: 472 KIFDILFVA-----DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +       +N  F       K    + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTK----VVEKPKPIFPRL 520


>gi|254302880|ref|ZP_04970238.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323072|gb|EDK88322.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 636

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   L+I YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALEIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   +  ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKELTI--LKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENNDEKFNKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++ +I +  A    DE I S+ + V++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNDVIVSSSASEAIDEEIKSMFNEVIKDVEKYMYLFEFSRALETIWRFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  +  DR + V+ +  E + ++A L+  ++P  A KI + L +
Sbjct: 418 SRLNKYIDETMPWALAKDESKKDRLAAVMNILCEGLYKIAFLIAPYMPMSAQKISNQLGI 477

Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509
             +    +  D +     K G  L +   PIFPR
Sbjct: 478 DKDITDVKFDDVKEWNIFKEGHKLGEA-SPIFPR 510


>gi|310778457|ref|YP_003966790.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747780|gb|ADO82442.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 637

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/512 (42%), Positives = 308/512 (60%), Gaps = 13/512 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+G AY  I ADV+AR+ +  G DV F TGTDEHGQK+ + A+  G
Sbjct: 5   FYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETAREKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + + D+ +  F DM ++L++S+DDFIRTT+ RH      + KK+ +KGDIYKG Y G
Sbjct: 65  FTPQEWTDKMAPRFEDMWNLLNVSHDDFIRTTQIRHKKAVTKILKKVYEKGDIYKGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E Y  ++++  G +G     +   V  ++EE YFF++S YQD LL + E HP+F
Sbjct: 125 KYCVSCETYVPENQIV-GENGCPDCGKDLRV--VKEESYFFKMSKYQDALLEHIEKHPDF 181

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           ILP  R+NEVISFVK GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY +
Sbjct: 182 ILPHSRKNEVISFVKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYEN 241

Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           N D  + KFW     +H++GKDILRFHAI WP  LL+A   LP K+ +HG+   +GEK+S
Sbjct: 242 NLDMFQ-KFWNDGEVVHLLGKDILRFHAIIWPCMLLAAEEKLPDKIVAHGWWTVEGEKMS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVIDP    E  G D  RYFL+RE+  G DG Y    +  R+NADLAN +GNL++R
Sbjct: 301 KSKGNVIDPQAETERYGRDPFRYFLMREVHFGNDGDYSTTSMVNRINADLANDLGNLLNR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K ++  +         D+ I  +    L+ + ++M      +AL  +   +S +
Sbjct: 361 TLGMYKKYFNSTVVKGTGHQIYDDQIKELWKETLESVEKSMSKLEFSKALEAIWKFISRM 420

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---- 478
           ++Y D   PW L K      R + V+   VE + ++A+L+  ++P+ A KI++ L     
Sbjct: 421 NKYIDETMPWALAKDEDKKPRLAVVMNNLVEALYKVAVLVYPYMPESAQKIWEQLGFSED 480

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + D      S  + +K G  L +   PIFPR 
Sbjct: 481 IKDAKLSVVSPWEVIKEGHNLGEA-KPIFPRI 511


>gi|290891337|ref|ZP_06554398.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429]
 gi|290478983|gb|EFD87646.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429]
          Length = 675

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/525 (39%), Positives = 315/525 (60%), Gaps = 16/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ + YI+T I YP+ +  +G+ Y  ++AD +ARFHR  G DV F TGTDEHG KI +
Sbjct: 1   MTKKNRFYITTPIYYPSGKLQLGNTYTTVLADSVARFHRALGEDVFFLTGTDEHGLKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG +   ++D+ + + + +  +++ISYD FIRTT+  H    + ++KK  D+GDIY
Sbjct: 61  KAEAAGKSEMEYLDEMAVSIKKLWKLMNISYDKFIRTTDAYHERVVQHIFKKFMDEGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ ++EE YFF++S Y D
Sbjct: 121 KGNYTGWYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGHEVQLVKEETYFFKMSKYSD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY  HPEF+ P  R NE+IS F+K GL+DL+L+R +F+WGI +P D ++++YVWID
Sbjct: 181 WLLQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWID 240

Query: 234 ALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           AL+NY+T  GY       D+      KFWPA+L ++GK+I+RFH IYWP  L +  LPLP
Sbjct: 241 ALSNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLP 300

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +V  HG+++ K  K+SKS GNV+ P  +    G+DA+RY+L+R +  G DG +  +   
Sbjct: 301 GEVLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLRSMPFGNDGVFSPEDFV 360

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            RVN DLAN +GNL++R++SMI +  +G+IP  G     D  +    S+ ++  ++ M+ 
Sbjct: 361 NRVNFDLANDLGNLLNRTISMINRYDNGLIPKLGKLLPEDRELEETASQAVENFKDEMEK 420

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAF 465
                AL  V +L+   ++Y D  +PW L K N  RA     +      +R +  LLQ  
Sbjct: 421 VHTADALEAVWTLIRRTNKYIDETEPWVLDK-NKQRAELDDAMAHLAASLRVVGSLLQPV 479

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +   KIFD L + +           +  G  + +   P+FPR 
Sbjct: 480 LTQAPKKIFDQLGLPEVEPISNLNFADIPTGVKVVERPTPLFPRL 524


>gi|154149034|ref|YP_001406307.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153805043|gb|ABS52050.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 638

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/477 (42%), Positives = 302/477 (63%), Gaps = 12/477 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  II D LARF+RL G +  F TGTDEHGQKI +AA+  
Sbjct: 2   KKFITTPIYYVNDIPHIGHAYTTIICDTLARFYRLQGYETFFLTGTDEHGQKIEEAAKKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G + K++ D  S  FR + D  DISYD FIRTT++ H  T +  ++ +   GDIYKG Y 
Sbjct: 62  GTSPKIYADAVSAKFRSLWDYFDISYDHFIRTTDEYHIKTAQNAFEIMFANGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y +  E+++ + ++    DG+Y        Q ++EE YFFRLS Y D+LL +YE    
Sbjct: 122 GYYCVSCESFFPETQL---IDGEYCPDCGKKTQIIKEESYFFRLSKYTDRLLKWYEDEEN 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242
            ILP  ++NEVISFVKSGLKDLS++R +FDWGIK+P+   DP+++MYVW+DAL NYL+  
Sbjct: 179 CILPRGKKNEVISFVKSGLKDLSITRTSFDWGIKLPEKLNDPKHVMYVWLDALINYLSAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  N  G K  FW   +H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+    G+K
Sbjct: 239 GYTQN--GEKMDFWNDTIHIVGKDILRFHAVYWPAFLMSLGLPLPKHIAAHGWWTRDGKK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P EV +  G++  RYFL+RE+  G+DG + +  +  R+N++LAN +GNL+
Sbjct: 297 MSKSIGNVVNPKEVADAYGLEQFRYFLLREVPFGQDGDFSQKAIISRINSELANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R + M  K  +  I +       +DE  ++     L+   EN++     R L ++   +
Sbjct: 357 NRIIGMSEKYSNFKINSKDVLKFYADE--MNETKNYLKNAVENLEEVATSRYLEELFKAL 414

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  +      +PW++ K    ++A  ++ +   ++ ++A+LL   +P+ A KI   L
Sbjct: 415 NLANSSITKYEPWKMIKNGENEKALALVALVANILAKVAVLLSPAMPQTAKKIATAL 471


>gi|322491559|emb|CBZ26831.1| putative methionyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 747

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/500 (41%), Positives = 296/500 (59%), Gaps = 17/500 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKGKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F+     ++   + FIRTT   H    + +WKK+  KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFTEMNYDMNYFIRTTNATHEKLVQDIWKKLEAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHEHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T        DG++           WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+     +KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDRN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENRC 485
           +P+ A +I D L V +  R 
Sbjct: 685 MPQKAKEIMDALGVPEAARA 704


>gi|302380917|ref|ZP_07269379.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311295|gb|EFK93314.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 666

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/475 (42%), Positives = 310/475 (65%), Gaps = 8/475 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQ--NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+  N G     ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++    DG+  +   + V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQL---KDGKCPDCGRD-VHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++ F+   L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDEELFN-KFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+I  P    + D+S++SV     +++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVITQPNDNNDIDKSLISVVEGCQEKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKI 472


>gi|218132714|ref|ZP_03461518.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992440|gb|EEC58443.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
           43243]
          Length = 676

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/479 (42%), Positives = 310/479 (64%), Gaps = 9/479 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 27  MEDKKKYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRQQGYDVFFQTGTDEHGQKIEL 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + FVD  S   + + D++D SY+ FIRTT+K H    + ++KK+ D+GDIY
Sbjct: 87  KAEEAGISPQEFVDNVSGEIKRIWDLMDTSYNKFIRTTDKYHEKQVQKIFKKLYDQGDIY 146

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++   ++    DG+  +    P Q   EE YF +L  Y +KL+ + 
Sbjct: 147 KGFYEGMYCTPCESFFTASQL---VDGKCPDCGR-PCQPAREEAYFLKLGKYTNKLIEHI 202

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           ESHPEFI P  R+NE+++ F+K+GL+DL +SR +F WGI +  D ++++YVW+DALTNY+
Sbjct: 203 ESHPEFIQPESRKNEMMNNFIKAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 262

Query: 240 TTTGY-LD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY +D N D +  K+WPADLH+IGKDILRFH IYWP  L++  LPLPK++F H ++L
Sbjct: 263 TGLGYDVDGNSDENFNKYWPADLHLIGKDILRFHTIYWPIMLMALGLPLPKQIFGHPWLL 322

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 323 QGDGKMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 382

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+++M  K + G +    A T+ DE +  V +     I ++M    +  A+ ++
Sbjct: 383 LGNLVNRTIAMSNKYFGGDVNDTSATTDFDEDLKRVVTGTKALIDKDMDKLRVADAITEI 442

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +L    ++Y D   PW L K  +  D  + VLY  VE I   A LL +++P+ A +I 
Sbjct: 443 FTLFKRCNKYIDETMPWALAKDESKQDELAHVLYNLVESITIGANLLTSYMPQTAGRIL 501


>gi|313893365|ref|ZP_07826939.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442134|gb|EFR60552.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 484

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/464 (42%), Positives = 294/464 (63%), Gaps = 7/464 (1%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA   G+T   +       F
Sbjct: 2   HIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAAAEGITPLEYTTNIVNGF 61

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + + + + IS DDFIRTT++RH    + L+ K  +KGDIYK  Y GWY   DE ++ + +
Sbjct: 62  KALWEKMHISNDDFIRTTDERHEKVVQELFTKAYEKGDIYKAEYEGWYCTPDETFWTEQK 121

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +  G +    +    PV+ ++EE YFF+L  Y D+ L + E +P+FI P  RRNE+I FV
Sbjct: 122 L--GPNHTCPDCGR-PVERVKEESYFFKLGKYTDQWLKFIEENPDFIQPESRRNEMIQFV 178

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++     D       K+WPADL
Sbjct: 179 KQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALSPFDGDGELYKKYWPADL 238

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+SKSLGNVIDPI +I+  
Sbjct: 239 HLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKMSKSLGNVIDPIPLIDTY 298

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++R+++MI K +DG+I   
Sbjct: 299 GADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLNRTIAMIEKYHDGVITKC 358

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
               + D  + ++  + +++    M+N  +++A+  V + +  +++Y D   PW L K+ 
Sbjct: 359 DDMDDLDRDVSALAVQTVKDFEAAMENMELNKAIKSVWAFIGRMNKYIDETMPWVLAKSE 418

Query: 440 ---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +  R  + +Y   E +R +AIL+   +P  A KI+D L +A
Sbjct: 419 DANDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWDQLGLA 462


>gi|237740543|ref|ZP_04571024.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422560|gb|EEO37607.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 637

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/514 (40%), Positives = 316/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKSMGMDTHFVTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   L+I YDDFIRTTE+RH    + + + + +KGDIYKG 
Sbjct: 62  QHGFTPQAWTDKMTPNFKNMWAALNIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   V  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKELTV--LKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP   I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G++       E D+ I ++    ++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGVVVASSTSEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  T   R + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWTLAKDETKKSRLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADENRCFQSLDQR----LKPGFMLHKTFDPIFPR 509
             +    +  D +     K G  L +   PIFPR
Sbjct: 478 DKDITSLKFDDIKEWNIFKEGHQLGEA-SPIFPR 510


>gi|157868928|ref|XP_001683016.1| methionyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68223899|emb|CAJ04288.1| putative methionyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 747

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/499 (41%), Positives = 297/499 (59%), Gaps = 17/499 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F+     ++   + FIRTT   H    + +WKK++ KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T        DG++           WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+     +KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L K +  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENR 484
           +P+ A +I D L V +  R
Sbjct: 685 MPQKAKEIMDALGVPEAAR 703


>gi|294785169|ref|ZP_06750457.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486883|gb|EFG34245.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 636

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G+I         D+ I ++   +++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPR 510


>gi|282883266|ref|ZP_06291864.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281296896|gb|EFA89394.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 653

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/513 (41%), Positives = 315/513 (61%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGH Y  + AD + RF  L G +V FTTGTDEHGQKIA  AQ
Sbjct: 2   KKNFYLTTPIYYPSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K +VD+   N + + + LDI YD FIR+T+ +H    + L+KK+ DKGDIYKG 
Sbjct: 62  EAGMEPKAYVDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y    E+++   +V    D           Q  +EE YFFRLS Y+DKLL    ++
Sbjct: 122 YEGYYCTPCESFWTQAQV---GDDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNN 178

Query: 184 PEFILPIERRNEVI-SFVKS--GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            EF  P  R+NE+I +F++S  GL+DLS+SR +  WG+++P D ++++YVWIDAL  YL+
Sbjct: 179 EEFTEPAFRKNELIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLS 238

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              +    D  K  +FWPAD+H++GK+I RFHA+ WPA L++ +LPLPKK+F HG+IL  
Sbjct: 239 AIEF--GTDKEKFNEFWPADVHLVGKEIFRFHALIWPALLMALDLPLPKKIFGHGWILFD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNV+ P  +I+  GVDAL+YFL+RE + G DG + K+   +R+N+DLAN +G
Sbjct: 297 NDKMSKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+VSMI K  +G+I  P    E D+ + ++   V  ++ E M++   + AL ++  
Sbjct: 357 NLLSRTVSMITKYNNGIIEKPKIEEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWK 416

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K   N DR +TVLY   E +R +++L+  F+   + +I   L
Sbjct: 417 LIRRSNKYVDETTPWILAKDEKNKDRLNTVLYNLAESLRIISVLINPFITNTSKEIIRQL 476

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + ++     S    L P          IFPR 
Sbjct: 477 GLEEKVDWESSQKWGLIPNATKVNKGQIIFPRL 509


>gi|260588948|ref|ZP_05854861.1| methionine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540727|gb|EEX21296.1| methionine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 661

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/479 (42%), Positives = 304/479 (63%), Gaps = 13/479 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE I+AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 11  DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 70

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 71  AEAGVTCKEFVDNVAGEIKSIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKG 130

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    PV   +EE YFFR+S Y  +L+ +  +
Sbjct: 131 YYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVTPAKEEAYFFRMSKYAQRLIDHINT 186

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 187 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 246

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG       K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L
Sbjct: 247 IGY--DCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 304

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   ++++  GVDA+RYF++ E+    DG    + + +R+N++LAN 
Sbjct: 305 QGDGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANT 364

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +         DE + +V      ++   M+   +  A+ ++
Sbjct: 365 LGNLVNRTISMSNKYFGGEVKNTNVCEPVDEELKAVVLGTKAKVAAKMEELRVADAITEI 424

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +L    ++Y D   PW L K     DR +TVLY  VE I   A LL++F+P+   KI 
Sbjct: 425 FTLFKRCNKYIDETMPWALAKDEDKKDRLATVLYNLVEGICIGASLLESFMPETTGKIL 483


>gi|116622455|ref|YP_824611.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225617|gb|ABJ84326.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 641

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/512 (41%), Positives = 305/512 (59%), Gaps = 26/512 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y++T + Y NA PHIGH Y  + A+ +ARF R+ G D +  TGTDEHGQK+ ++A+ A
Sbjct: 2   KYYLTTPLYYVNAAPHIGHTYTTMAAETIARFKRMQGYDAVMFTGTDEHGQKVERSAEAA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + F D  +R F+   + L+I  D  IRTT+ RHH   + L++   D G IYKG YS
Sbjct: 62  GKTPQEFTDTIAREFQQQWEKLNIRVDRTIRTTDPRHHKVVQRLFQMCMDNGYIYKGSYS 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y + DE Y ND +      G          + + EE YFF+LSA+ +KLL  YES P+
Sbjct: 122 GQYCVYDELYANDAK-----PGDPCPICGRITETVTEENYFFKLSAFTEKLLELYESQPD 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFVK GL DLS+SR T  WGI +P +  ++ YVW DAL  Y++    +
Sbjct: 177 FIQPEARRNEVISFVKQGLNDLSISRTTIKWGIPLPVEGNHVFYVWFDALIGYMSA---V 233

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  D      WPADLH++GK+I RFHA++WPAFL++  +PLPK++ +HG++L + +K+SK
Sbjct: 234 DGED-----LWPADLHLMGKEITRFHAVFWPAFLMAGGVPLPKRIVAHGWLLFENDKMSK 288

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN++    + + +G DALRYFL+REI  G+DG +  D L  R N+DLANG+GNL SR+
Sbjct: 289 SRGNIVRSEPIRQVMGADALRYFLLREIVFGQDGSFSYDALIGRYNSDLANGLGNLASRT 348

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI +   G +P       SD  I  + ++ ++ ++E        + L  V  L+S VD
Sbjct: 349 LTMINQYRGGAVP-----EGSDAEIAGIANQTIRTVQETFDRFEFSKGLEAVWGLISAVD 403

Query: 426 RYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++     PW+L + N   +    ST LY   E +R    LL   +P+ A KI+  L + +
Sbjct: 404 KFIVQNAPWKLARQNDQESQTLLSTTLYTAAEALRVATALLSPVLPQSAPKIWAQLGLPE 463

Query: 482 --ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             E   F +L+   L+PG  + +    +FPR 
Sbjct: 464 SIEAVRFATLEWGSLQPGQKIGEIAG-VFPRI 494


>gi|164688857|ref|ZP_02212885.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
 gi|164602061|gb|EDQ95526.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
          Length = 648

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/482 (41%), Positives = 294/482 (60%), Gaps = 7/482 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+ + HIGH Y  +  D +ARF R  G DV F TGTDEHG+KI K A+
Sbjct: 3   KETFYITTPIYYPSGRLHIGHTYTTVATDAIARFKRFCGYDVRFLTGTDEHGEKIQKKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T   ++D    + + +   +DISYDDFIRTTE RH    + ++ K+ ++GDIYKG 
Sbjct: 63  EAGMTEMEYLDGMIADIKKLWKTMDISYDDFIRTTEPRHTKIIQKIFTKLYEQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG             +EE YFF+LS Y+D++   ++ +
Sbjct: 123 YEGRYCTPCESFWTESQL---VDGDKCPDCGRETYVAKEEAYFFKLSKYEDRIKELFK-N 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P +  P  R NE+I+ F++ GL+DL ++R TFDWGIK+P D ++++YVW+DAL NY+T  
Sbjct: 179 PNYCFPEARANEMIANFLEPGLEDLCVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY+   D    K+WPA++ V+GK+I+RFH I WPA L++ +LP+ K+VF HG+IL   +K
Sbjct: 239 GYMSEDDSLFKKYWPANIQVVGKEIIRFHTIIWPALLMALDLPVSKQVFGHGWILFANDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN++ P ++IE  G+D L+Y+L+RE A G+DG Y       R+N DLAN +GNLV
Sbjct: 299 MSKSKGNIVYPEQMIERYGIDTLKYYLLREFAFGQDGSYTHRNFITRINTDLANDLGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K   G+IP P   TE DE++    +   +   E M     H AL  V  L+ 
Sbjct: 359 SRTIAMVEKYNGGIIPEPKVATEFDEALKQQAAESRRIFEEQMNKMQFHEALEGVWKLIR 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K  +  D   TVLY   E IR  + L+   +   A KI+  + + 
Sbjct: 419 RTNKYIDETAPWVLAKDESKKDVLDTVLYNLCESIRIFSTLINPIMNTTAKKIYAQMGIE 478

Query: 481 DE 482
            E
Sbjct: 479 GE 480


>gi|269928561|ref|YP_003320882.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787918|gb|ACZ40060.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 525

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/524 (41%), Positives = 308/524 (58%), Gaps = 23/524 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI+T+I Y NA PH+GHA E ++AD  AR+HRL G D  F TGTDE+      AA+
Sbjct: 6   RHRFYITTSIPYVNAAPHLGHALEYVLADAFARYHRLTGDDTRFLTGTDENSLTNVLAAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKG 122
             G+     VD+N+  FR + + LDIS DDFIRT  E RH +  + LW+  +  GDI K 
Sbjct: 66  REGIPVADLVDRNAEAFRRLTEYLDISNDDFIRTAAEPRHIEGAQKLWEACARAGDIDKR 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSG Y +  E +Y ++E   G   ++    H P++ +EEE YFFRLS YQD L    +S
Sbjct: 126 YYSGLYCVLGEQFYTEEEAPDGLCPEH----HIPLELVEEENYFFRLSRYQDALARAIDS 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
               I+P  RRNEV +F+  GL+D+S+SR   +   WGI +P DP  +MYVW DAL NY+
Sbjct: 182 EALRIIPETRRNEVRAFIARGLEDVSISRTRARARGWGIPVPGDPDQVMYVWFDALANYI 241

Query: 240 TTTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           T  GY  + D  + ++W   P  +HVIGK ILRFHA+YWPA L+SA  PLP  +  HG++
Sbjct: 242 TALGYAHDADLYR-RYWVENPHRVHVIGKGILRFHAVYWPAMLMSAGEPLPTTIVVHGYL 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKSLGNV+DP E+    G DA+RY+++ E+   +D  Y  + L++R NADLAN
Sbjct: 301 TVGGEKMSKSLGNVVDPAELTARYGADAVRYWMLLEVPPTQDADYTDEKLERRYNADLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
            +GNL++R+VSMI +   G++P PG    +D+ + +V + +   I E M QN     ALA
Sbjct: 361 DLGNLLNRTVSMIRRYRAGLVPAPGEPVTTDQDLEAVAANLPGAIAEAMGQNFDPQTALA 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPK 468
            +  LV   +RY +   PW L +           R  T LY   E +R +A  L+ F+P 
Sbjct: 421 AIWDLVVRANRYVEETAPWSLARAERSGDAAATARLDTALYHLAEALRIIAQALRPFLPD 480

Query: 469 LANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            A +I + + VA E   + +     +L PG  + +   PIFPR 
Sbjct: 481 TAKRIAEQIGVALETPSWPAALTWGQLPPGTQVSEP-RPIFPRI 523


>gi|255657488|ref|ZP_05402897.1| methionyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449084|ref|ZP_06890874.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879907|ref|ZP_06903880.1| methionine--tRNA ligase [Clostridium difficile NAP07]
 gi|296262177|gb|EFH08982.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429196|gb|EFH15070.1| methionine--tRNA ligase [Clostridium difficile NAP07]
          Length = 645

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/475 (42%), Positives = 292/475 (61%), Gaps = 7/475 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A 
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG 
Sbjct: 63  EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++ +G        +   V+   EE YFFRLS Y+D+L   ++  
Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             F  P  R+NE+++ F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T  
Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +K
Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K  +G+IPT    T+ D  +        +     M     H AL  V  LV 
Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++Y D   PW L K     D   TVLY   E IR +A L+   + + ANKI++
Sbjct: 419 RTNKYIDETMPWALAKDEAKKDELDTVLYNLCESIRIIATLINPIMNETANKIYE 473


>gi|302384601|ref|YP_003820423.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195229|gb|ADL02800.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 659

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/477 (41%), Positives = 309/477 (64%), Gaps = 13/477 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE ++AD +AR+ R +G DV F TGTDEHGQKI + A+ AG+
Sbjct: 11  YITTAIAYASGKPHIGNTYEAVLADAIARYKRAEGYDVFFQTGTDEHGQKIEEKAEAAGI 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD+ +   R + D+++ SYD FIRTT+K H +  + ++KK+ ++ DIYKG Y G 
Sbjct: 71  TPKEFVDRAAGEIRKIWDLMNTSYDKFIRTTDKDHEEQVQKIFKKLYEQDDIYKGYYEGL 130

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     V+  +EE YFFR+S Y D+L+ +   +P+FI
Sbjct: 131 YCTPCESFFTESQL---VDGKCPDCGRE-VKPAKEEAYFFRMSKYADRLIKHINENPDFI 186

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P+ R+NE+++ F+  GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  GY  
Sbjct: 187 QPVSRKNEMMNNFLLPGLQDLCVSRTTFQWGIPVSFDPRHVTYVWLDALTNYITGIGY-- 244

Query: 247 NPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + DG      +K WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L    K
Sbjct: 245 DCDGQSREQFSKLWPADLHLIGKDIIRFHTIYWPIFLMALDIPLPKQVFGHPWLLQGDGK 304

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNLV
Sbjct: 305 MSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGIISWELMVERMNSDLANILGNLV 364

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K ++G++    A    DE + +V    +++++E M+   +  A+  + ++  
Sbjct: 365 NRTISMSNKYFEGIVKDGKAAEAVDEDLKAVVLEEVKKVQEKMEKLRVADAMTSIFNIFR 424

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++Y D   PW L K   + +R  TVLY   E I   A LL +F+P  + KI   L
Sbjct: 425 RSNKYIDETTPWTLAKDEASKERLETVLYNLTEAIAIGASLLDSFMPDTSKKILSQL 481


>gi|55822425|ref|YP_140866.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738410|gb|AAV62051.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 667

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/523 (40%), Positives = 315/523 (60%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G YSG
Sbjct: 65  ITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L ++Y
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFSWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D      V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L +         L+     GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|116627343|ref|YP_819962.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100620|gb|ABJ65766.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 667

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/523 (40%), Positives = 316/523 (60%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  + + +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G YSG
Sbjct: 65  ITPQEYVDSMAVDVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L ++Y
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D      V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L +         L+     GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|34764087|ref|ZP_00144966.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27886141|gb|EAA23438.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 636

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G+I         D+ I ++   +++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   P+FPR
Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPVFPR 510


>gi|307721053|ref|YP_003892193.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979146|gb|ADN09181.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 647

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/508 (41%), Positives = 308/508 (60%), Gaps = 13/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N + HIGHAY   IAD +AR+ RL G D  F TGTDEHGQKI ++A+ AG 
Sbjct: 4   YITTPIYYVNGEAHIGHAYTTFIADTMARYERLKGEDTFFLTGTDEHGQKIEESAEKAGK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+ F D+ S  F+++ D   ISYD FIRTT++ H    +  ++ +  KGDIYK  Y G 
Sbjct: 64  PTQEFADEISATFKNLWDEFGISYDKFIRTTDEDHKKGVQKAFEVMYAKGDIYKDFYEGH 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E ++ + ++    DG++          ++EE YFF+LS Y+DKLL +Y +HP+FI
Sbjct: 124 YCVSCETFFPETQLI---DGEFCPDCGRATSIVKEESYFFKLSNYEDKLLEHYANHPDFI 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           +P  R NEV+SFVK GL+DLS++R +F WG+K+P    D +++MYVW+DAL NY+T  GY
Sbjct: 181 MPRSRANEVVSFVKGGLRDLSVTRTSFSWGVKMPKSIGDDKHVMYVWLDALLNYITALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D +K  +WPAD+H +GKDILRFHAIYWPAFL+S  L LPK + +HG+    GEK+S
Sbjct: 241 --GSDEAKMNYWPADIHFVGKDILRFHAIYWPAFLMSLGLELPKHIGAHGWWTRDGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV +  GV+ LRYF++RE+  G+DG + +     R+N++L+N +GNL++R
Sbjct: 299 KSKGNVVSPKEVADAYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K  D  I +        + I  + + VL  +   M+N   HR L ++  L +  
Sbjct: 359 IIGMSGKYSDFEIDSVDVEKYHAKEITQM-NTVLNSLDSFMENLQTHRYLEELWKLFAIG 417

Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW ++K    D A   + V   ++ + A++L   +P   N I D L     N
Sbjct: 418 NGVIQEYEPWVKMKNNQKDEALATVAVVANILAKAAVMLHPIMPNTTNIIADALSFEINN 477

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509
             ++ L  D++L   F + K   P+FPR
Sbjct: 478 ASYKELIIDKKLLKLFNIKKV-PPLFPR 504


>gi|312277854|gb|ADQ62511.1| Methionyl-tRNA synthetase MetG [Streptococcus thermophilus ND03]
          Length = 667

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/523 (40%), Positives = 315/523 (60%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G YSG
Sbjct: 65  ITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L ++Y
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFSWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D      V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L +         L+     GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|309775299|ref|ZP_07670308.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916962|gb|EFP62693.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 681

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/481 (42%), Positives = 309/481 (64%), Gaps = 13/481 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI Y + +PHIG+ YE+I+ D +AR+ R  G DV F TGTDEHGQKI + A+ AGV
Sbjct: 36  YITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAKEAGV 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD+ +   R   D+++ SYD FIRTT+  H    + ++KK+ ++GDIYK  Y G 
Sbjct: 96  TPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQGDIYKSTYEGL 155

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PV+   EE YFF L  Y  +L+ + E HPEFI
Sbjct: 156 YCTPCESFWTESQL---VDGKCPDCGR-PVEKASEEAYFFNLQKYAPRLIKHIEDHPEFI 211

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+I+ F+K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T+ G+  
Sbjct: 212 QPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITSLGF-- 269

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + DG+      K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L    K
Sbjct: 270 DADGNHGELYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVGDGK 329

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +R+N+DLAN +GNLV
Sbjct: 330 MSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANVLGNLV 389

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K ++G+I  P    + D+ ++++     + + + M+   +  A+ ++ +L+ 
Sbjct: 390 NRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEIFTLLK 449

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR +TVLY  +E IR  A+LL +++P+ A KI + L  +
Sbjct: 450 RCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRISAVLLSSYMPETAEKILEELSTS 509

Query: 481 D 481
           +
Sbjct: 510 E 510


>gi|55820534|ref|YP_138976.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736519|gb|AAV60161.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 667

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/523 (40%), Positives = 315/523 (60%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G YSG
Sbjct: 65  ITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L ++Y
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFY 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D      V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMSTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L +         L+     GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|317499441|ref|ZP_07957708.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893313|gb|EFV15528.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 656

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 310/474 (65%), Gaps = 13/474 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A+  GV
Sbjct: 7   YITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAEEKGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG Y G 
Sbjct: 67  TPKEFVDDVAGEIKRIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQGDIYKGEYEGL 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PVQ  +EE YF +LS Y D+L+ +  +HPEFI
Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFLKLSKYADRLIEHINTHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+  GL+DL +SR +F WGI +  D  +I+YVW+DALTNY+T  GY  
Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITGIGY-- 240

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + DG+ +    KFWPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L    K
Sbjct: 241 DCDGNSSDKFNKFWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+   ++++  GVDA+RYF++ E+   +DG    + + +R+N+DLAN +GNLV
Sbjct: 301 MSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILGNLV 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K + G++   G   + D+ + +V +    ++ E M +  +  ++ ++ +L  
Sbjct: 361 NRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVTGTRDKVAEKMADLRVADSMTEIFNLFR 420

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +RY D   PW L K   + DR +TVLY  VE I   A LL  ++P+ + KIF
Sbjct: 421 RCNRYIDETMPWVLAKDEASKDRLATVLYNLVEGITIGASLLSPYMPETSEKIF 474


>gi|126701164|ref|YP_001090061.1| methionyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252601|emb|CAJ70444.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Clostridium difficile]
          Length = 645

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/475 (42%), Positives = 292/475 (61%), Gaps = 7/475 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A 
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAI 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG 
Sbjct: 63  EQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++ +G        +   V+   EE YFFRLS Y+D+L   ++  
Sbjct: 123 YEGRYCTPCESFWTESQLLEGNKCPDCGRETYLVK---EESYFFRLSKYEDRLKELFKDD 179

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             F  P  R+NE+++ F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T  
Sbjct: 180 -SFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +K
Sbjct: 239 GYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNLI 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K  +G+IPT    T+ D  +        +     M     H AL  V  LV 
Sbjct: 359 SRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVR 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++Y D   PW L K  T      TVLY   E IR +A L+   + + ANKI++
Sbjct: 419 RTNKYIDETMPWALAKDETKKGELDTVLYNLCESIRIIATLINPIMNETANKIYE 473


>gi|256826934|ref|YP_003150893.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583077|gb|ACU94211.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 526

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/512 (41%), Positives = 300/512 (58%), Gaps = 13/512 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y NA PH+G AY  I ADVL+R+ R+DG DV F  G DEHGQK+A  A   G+T
Sbjct: 8   ITTPIYYVNAAPHLGTAYTTIGADVLSRYKRMDGYDVAFVGGMDEHGQKVADTAAKKGMT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     F D  ++LDI+Y D +RTTE+R   T +  W  + +KG +YK  Y GWY
Sbjct: 68  PQAWCDSMEPAFLDAWNLLDITYTDIVRTTEERQTRTVQRFWGDLYEKGWLYKDSYDGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWME-EEGYFFRLSAYQDKLLSYYESHPEF 186
            + +E YY + ++ K  DG +   + H PVQ    EE +FF+LS +QD+LL++Y+ HP+F
Sbjct: 128 CVHEETYYAESDLEKDEDGTFVCPECHRPVQKASGEENWFFKLSEFQDRLLAFYDEHPDF 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P+ RRNE++SFVK GLKDLS+SR TFDWGI +P D  ++ YVW DAL  Y T  GY D
Sbjct: 188 IQPLTRRNEIVSFVKGGLKDLSISRSTFDWGIPLPFDTGHVAYVWADALLAYFTGIGYAD 247

Query: 247 NP-DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
               G     WP   H +GKDI RFH + WPA L++A LP+  KVF HGF+L KGEK+SK
Sbjct: 248 EARAGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHKVFGHGFLLTKGEKMSK 307

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN + P +++   GVDA RY+ + ++  G DG    + + +  NADLAN  GNLVSR 
Sbjct: 308 SKGNGVMPADLVRIFGVDAYRYYFMSDVQFGHDGNISMERMVQVYNADLANTWGNLVSRV 367

Query: 366 VSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +M  K +DG +P  P +  E+   +  + + + +     M       A A V  L S V
Sbjct: 368 FNMTGKYFDGKVPEAPSSAVEN--PLRELANNLYETYDACMAAVDFTGAAAAVQQLASRV 425

Query: 425 DRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-- 479
           + Y +   PW L K +P RA   + V+Y  +E  R +A+ +  F+P+ ++++F  L +  
Sbjct: 426 NLYVEDSAPWNLAK-DPARADELAAVIYNALEACRIIALFMSPFMPRTSDEVFHRLSLDA 484

Query: 480 -ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +D           L P     +  +P+FPR 
Sbjct: 485 ASDSTDIESQSAWGLLPAGNAVEKGEPLFPRL 516


>gi|317054912|ref|YP_004103379.1| methionyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447181|gb|ADU20745.1| methionyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 651

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/494 (40%), Positives = 311/494 (62%), Gaps = 14/494 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI+TAIAY + +PHIG+ YE++  D +ARF R+ G DV F TGTDEHG KI   A+
Sbjct: 3   KEKFYITTAIAYASKKPHIGNTYEVVFTDAIARFKRMQGYDVFFLTGTDEHGMKIEGLAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K  VD+ +   +D+   ++ISYD FIRTT+++H    + ++ K+ ++GDIYKG 
Sbjct: 63  EEGISPKEHVDKVAGEIKDICKCMNISYDGFIRTTDEQHEKVVQKIFNKLYEQGDIYKGS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++   ++    DG+  +     V+   EE YF +LS YQ  L  Y E+H
Sbjct: 123 YEGMYCVPCESFWTQSQL---VDGKCPDCGRE-VKPAHEEAYFLKLSKYQQWLEDYIETH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI+P  R+ E+++ F+K GL+DL +SR TF W I +  DP++++YVWIDAL+NY+T  
Sbjct: 179 PDFIVPESRKKEMLNNFIKPGLQDLCVSRTTFTWSIPVTFDPKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY  +PDGS  +F   WP D HVIGKDI+RFH+IYWP  L +  + +PKK+F H +IL  
Sbjct: 239 GY--DPDGSSEQFKKYWPCDCHVIGKDIMRFHSIYWPIMLHALGVEIPKKLFGHNWILFG 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNVI   EV++  GVD  RY+L+ E+    DG    + L +R N+DLAN +G
Sbjct: 297 EDKMSKSKGNVIYADEVVDTFGVDGARYYLLSEMGLNGDGSITYESLIERYNSDLANTLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R+V+M  K + G I  P      D+ ++++     +++ + +    +  A+  +++
Sbjct: 357 NLVNRTVAMTKKYFGGEIRQPEVKEPVDDELIALAVETPKKVADLIDQYRMADAMEAIMT 416

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D  +PW L K      R STVLY  +E IR L ++L+AF+P+ + KI  + 
Sbjct: 417 LARRANKYIDETEPWVLGKDEAKFGRLSTVLYNLLETIRFLGVILEAFMPETSEKI--LT 474

Query: 478 FVADENRCFQSLDQ 491
            +  + + F SL++
Sbjct: 475 QIGTDVKGFDSLNE 488


>gi|167768118|ref|ZP_02440171.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1]
 gi|167709642|gb|EDS20221.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1]
 gi|291559969|emb|CBL38769.1| methionyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 656

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 310/474 (65%), Gaps = 13/474 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A+  GV
Sbjct: 7   YITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAEEKGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG Y G 
Sbjct: 67  TPKEFVDDVAGEIKRIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQGDIYKGEYEGL 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +    PVQ  +EE YF +LS Y D+L+ +  +HPEFI
Sbjct: 127 YCTPCESFFTESQL---VDGKCPDCGR-PVQPAKEEAYFLKLSKYADRLIEHINTHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE+++ F+  GL+DL +SR +F WGI +  D  +I+YVW+DALTNY+T  GY  
Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITGIGY-- 240

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + DG+ +    KFWPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L    K
Sbjct: 241 DCDGNSSDKFNKFWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGDGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+   ++++  GVDA+RYF++ E+   +DG    + + +R+N+DLAN +GNLV
Sbjct: 301 MSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILGNLV 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  K + G++   G   + D+ + +V +    ++ E M +  +  ++ ++ +L  
Sbjct: 361 NRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVTGTKDKVAEKMADLRVADSMTEIFNLFR 420

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +RY D   PW L K   + DR +TVLY  VE I   A LL  ++P+ + KIF
Sbjct: 421 RCNRYIDETMPWVLAKDEASKDRLATVLYNLVEGITIGASLLSPYMPETSEKIF 474


>gi|256845534|ref|ZP_05550992.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719093|gb|EEU32648.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 636

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDTVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE+  G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREVNFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++ +I         D+ I ++   +++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNSVIVASSTAEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPR 510


>gi|331083329|ref|ZP_08332442.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404410|gb|EGG83955.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 652

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/479 (42%), Positives = 304/479 (63%), Gaps = 13/479 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE I+AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 2   DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGV+ K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  AEAGVSCKEFVDNVAGEIKSIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG+  +    PV   +EE YFFR+S Y  +L+ +  +
Sbjct: 122 YYEGMYCTPCESFFTESQL---VDGKCPDCGR-PVTPAKEEAYFFRMSKYAQRLIDHINT 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG       K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L
Sbjct: 238 IGY--DCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   ++++  GVDA+RYF++ E+    DG    + + +R+N++LAN 
Sbjct: 296 QGDGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANT 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +         DE + +V      ++   M+   +  A+ ++
Sbjct: 356 LGNLVNRTISMSNKYFGGEVKNTNVCEPVDEELKAVVLGTKAKVAAKMEELRVADAITEI 415

Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +L    ++Y D   PW L K     DR +TVLY  VE I   A LL++F+P+   KI 
Sbjct: 416 FTLFKRCNKYIDETMPWALAKEEDKQDRLATVLYNLVEGICIGASLLESFMPETTGKIL 474


>gi|311897996|dbj|BAJ30404.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 534

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/518 (40%), Positives = 307/518 (59%), Gaps = 17/518 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N +PH+GHAY  +  DVL R+HR  G DV + TGTDEHGQKI + A+  GV
Sbjct: 14  YVTTPIYYVNDRPHLGHAYTTVAGDVLTRWHRQRGEDVWYLTGTDEHGQKILRTAEANGV 73

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+     ++ + + L I+ DDFIRTTE RH D  +   + + DKG+IY+G Y+G
Sbjct: 74  TPQEWCDKLVGEAWKPLWEHLRIANDDFIRTTEARHTDRVQEFVQDLYDKGEIYQGSYTG 133

Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            Y +  E Y    E+  G   D +       PV+W+EEE YFFRLSAY  KLL +Y ++P
Sbjct: 134 PYCVGCEEYKLPGELLPGTTEDEKLCPVHKRPVEWLEEENYFFRLSAYGPKLLEFYAANP 193

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P   RNEV+ FV+  LKDLS+SR TFDWG+ +P D ++++YVW+DAL NY+T  GY
Sbjct: 194 DFIQPASARNEVLRFVEQDLKDLSISRSTFDWGVPLPWDAKHVLYVWVDALQNYITAAGY 253

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +P+   A+ WPA +H++GKDILRFHA+ WPA L++A LPLP++V ++G+++  GEK+S
Sbjct: 254 GSDPE-RFARLWPASVHLVGKDILRFHAVIWPAMLMAAGLPLPRRVVANGWLMVGGEKMS 312

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS    I P ++    GVDA RY+ +R I  G DG +  +    R  ++LAN  GNL SR
Sbjct: 313 KSNLTGIAPTDLTSHFGVDAYRYYFLRAIPFGTDGSFSWEDFTARYTSELANDFGNLASR 372

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
             +M+ K +DG +P   A   +++++     +   E    +  +L     +A V   V  
Sbjct: 373 VAAMVGKYFDGALPAATAHGPAEQALADALVKATAEADRKIGEELDFAGGIAAVFEFVKL 432

Query: 424 VDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-- 477
           V+ Y   Q+PW++ K        R +TVLY   E +R  A+LL   +P  A +++D L  
Sbjct: 433 VNGYLTEQEPWKVAKDTTAEGQARLATVLYTAAEALRATAVLLNPLMPDSAAELWDSLGA 492

Query: 478 -----FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 +AD+     +   RL  G  + K  + +FPR 
Sbjct: 493 EPALGALADQRIATVADWGRLPAGATVTKG-EILFPRL 529


>gi|291460472|ref|ZP_06599862.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416844|gb|EFE90563.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 673

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/502 (41%), Positives = 310/502 (61%), Gaps = 21/502 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI + A
Sbjct: 2   EKKAYYITTAIAYASGKPHIGNTYEIVLADAIARFKRFEGYDVFFQTGTDEHGQKIEQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+    +VD      R + D+++ SYD F+RTT+  H    + +++K+ +KGDIYKG
Sbjct: 62  REAGMEPGQYVDGVVGEIRAIWDLMNTSYDKFMRTTDPYHEKQVQKMFRKMYEKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++    DG+  +    PV+   E  YFFR+S Y D+L+ + E 
Sbjct: 122 VYEGWYCTPCESFWTDSQL---VDGKCPDCGR-PVERASESSYFFRMSKYADRLMKHIEE 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE++ +F+K GL+DLS+SR  F WGI +  DP+ ++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMVNNFLKPGLQDLSVSRTVFKWGIPVDFDPENVIYVWLDALTNYITG 237

Query: 242 TGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            GY  + DG+ +    ++WPADLH+IGKDI+RFH +YWP FL+S  LPLPK+VF H ++L
Sbjct: 238 LGY--DVDGNSSERFHRYWPADLHLIGKDIIRFHTLYWPIFLMSLELPLPKQVFGHPWLL 295

Query: 298 ------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKS GNVI   E++   GVDA+R+F++ E+    DG    + + +R N
Sbjct: 296 TAAGKSEEGVKMSKSRGNVIYADELVRLFGVDAVRFFVIHEMPFENDGVISWELMAERYN 355

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
             LAN +GNLV RS++M  K + G++   GA    DE +     + ++ I   M    I 
Sbjct: 356 GMLANILGNLVKRSIAMSNKYFGGIVRDSGAAEPVDEDLKETVLKNVRAIVAKMDELRIA 415

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  +  +    ++Y D  +PW L K      R  TVLY   E I   A +L++F+P+ 
Sbjct: 416 DALDLLFDIFRRSNKYIDETEPWLLAKEEGKSARLETVLYNLTEAIVIGASVLESFMPRT 475

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           A +I   L    E R  + +D+
Sbjct: 476 AEEILRQL--NTEARPLEQMDR 495


>gi|218437104|ref|YP_002375433.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218169832|gb|ACK68565.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 530

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/489 (41%), Positives = 298/489 (60%), Gaps = 14/489 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  ++T + Y N  PHIG AY  +IADV+AR+ RL G  VL  TGTDEHGQKI + A+
Sbjct: 8   QKKFALTTPLYYVNDIPHIGSAYTTMIADVIARWKRLQGYSVLLITGTDEHGQKIQRTAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G+  +   D+    F+ + D L+ISYD F RT+ +RH D  +  ++++ ++GDIY   
Sbjct: 68  SKGLNPQAHCDRIVDEFKTLWDKLNISYDRFSRTSSERHQDIVKEFFQRVWEQGDIYLDQ 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
             GWY +  E +    E+ +    Q +       +W +EE YFFRLS YQ+KL  +Y  +
Sbjct: 128 QKGWYCVACEEFKEQRELTEEGYCQIHTNLK--AEWKDEENYFFRLSKYQEKLEEFYRLN 185

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV++FVK GL+D S+SR   DWG  +P DP + +YVW DAL  Y+T   
Sbjct: 186 PEFIQPESRRNEVLNFVKQGLQDFSISRVNVDWGFPLPSDPNHTIYVWFDALLGYITP-- 243

Query: 244 YLDNPD------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            L NPD       + + +WP +LH+IGKDILRFHA+YWPA L+SA LPLP +VF HGF+ 
Sbjct: 244 -LLNPDQEPTLENALSIWWPINLHLIGKDILRFHAVYWPAMLMSAQLPLPDRVFGHGFLT 302

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+ KSLGN +DP ++I   G DA+RY+ V+EI  GKDG +++      +NADLAN 
Sbjct: 303 KDGQKMGKSLGNTLDPFDLIYRYGADAVRYYFVKEIELGKDGDFNETRFVNILNADLAND 362

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQ 416
           +GNL++R++ M+ K  +G  P   + +  + + L +  + L E + E+M++   + A  +
Sbjct: 363 LGNLLNRTLGMVQKYCNGNGPQLTSDSLDENNPLKIIGQQLSERVSESMESLQFNGACEE 422

Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + SL+   ++Y D   PW L K+        VLY  +E +R  A LL    P L+N+I+ 
Sbjct: 423 IFSLIRACNKYIDESAPWSLFKQKKQTEVEQVLYGVLESVRLAAYLLSPITPNLSNRIYQ 482

Query: 476 IL-FVADEN 483
            L F  D N
Sbjct: 483 QLGFCVDFN 491


>gi|210629937|ref|ZP_03296184.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
 gi|210160754|gb|EEA91725.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
          Length = 533

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/534 (39%), Positives = 313/534 (58%), Gaps = 26/534 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I Y NA PH+G AY  IIADV AR+ R  G  V F TG DEHGQK+A+
Sbjct: 1   MSSKPSYYITTPIYYVNADPHLGTAYSTIIADVQARYRRAAGYSVKFLTGMDEHGQKVAE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T + + D  + +F ++ + L+IS DDFIRTTE R     + LW+++ + G IY
Sbjct: 61  AAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWY + DE ++ + +V K     G +GQ+     H P++ ++EE +FF+LSA+QD
Sbjct: 121 KGSYDGWYCVPDETFFTETQVEKADEARGTEGQHLCPDCHRPLERVKEESWFFKLSAFQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           KLL+ Y+ HP+F+ P  R NEV SFV+ GL DLS+SR +FDWGI++P D +++ YVW DA
Sbjct: 181 KLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDDEHVTYVWFDA 240

Query: 235 LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           LTNY+T  GY    D + A F   WPA  H++GKDI+RFH + WPA L++    LP+ VF
Sbjct: 241 LTNYMTAVGYGQEGDEAAADFAYRWPAQTHIVGKDIIRFHCVIWPAMLMALGEALPEHVF 300

Query: 292 SHGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           +HGF+        K EK+SKS GN I P EVIE++GV+  RY+ + ++  G DG      
Sbjct: 301 AHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMTDVTPGTDGAISFGR 360

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           +++  NADLAN  GNL+SRS +M +K ++G  P     A   ++  + +V   + +    
Sbjct: 361 MEQVYNADLANSWGNLISRSTNMCIKYFEGATPERDSSAAGYAENPLAAVADGLFERYAA 420

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460
            M+      A  +V+ LV   + Y +  +PW L K +P +    + V++  +E IR  A 
Sbjct: 421 KMEAFAYGDAAKEVMELVHAANLYIENSEPWTLAK-DPAKTGELANVIWNLLECIRITAH 479

Query: 461 LLQAFVPKLANKIFDILFV----ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           LL   +P  + +    +      A +N        +L  G  + K  + +FPR 
Sbjct: 480 LLMPLMPSTSAEALRRIGCEGEAATDNMAAACAWGQLAAGLPVEKG-EALFPRL 532


>gi|88856857|ref|ZP_01131510.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88813927|gb|EAR23796.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 526

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/485 (42%), Positives = 297/485 (61%), Gaps = 10/485 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  YI+T I Y N  PHIGHAY  + ADVLAR+HR  G D    TGTDEHGQKI +
Sbjct: 1   MSAGDSFYIATPIFYVNDVPHIGHAYTEVAADVLARWHRQRGEDAWLLTGTDEHGQKILR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A     T + + D+  + +++ + + +DI+ DDFIRTT++RH        +++ D G I
Sbjct: 61  TAVANNTTPQEWADRLVADSWQPLLETIDIANDDFIRTTDERHEKAVATFLQRLYDDGHI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN----AQHN-PVQWMEEEGYFFRLSAYQD 174
           Y G Y G+Y +  E Y   D++    DG+Y      A H+ PV+ ++E+ YFFR+S +  
Sbjct: 121 YAGEYEGYYCVGCEEYKQLDDLVTAPDGEYKGQLVCAIHSRPVEVLKEKNYFFRMSDFGQ 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           KLL  YES P+F+ P   RNE++ FVK GL DLS+SR +FDWG+K+P D  +++YVW DA
Sbjct: 181 KLLDLYESQPDFVQPASVRNEIVQFVKQGLDDLSISRSSFDWGVKVPWDETHVVYVWFDA 240

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY++  GY  + +   AK WPA + ++GKDI RFHA+ WPA L++A LP+P+ VF HG
Sbjct: 241 LLNYVSAIGYGVDEE-QFAKRWPA-VQLVGKDIARFHAVIWPAMLMAAGLPVPRAVFGHG 298

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L  GEK+SKS    I P ++ +  G DA RY+ +  I  G+DG +  + L  R  ++L
Sbjct: 299 WLLVGGEKMSKSKLTGIAPSQITDTFGSDAFRYYFMSAITFGQDGSFSWEDLSARYQSEL 358

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           ANG GNL SR ++M+ K +DG IPT G  T SDE+I++   R  ++    +    I+ AL
Sbjct: 359 ANGFGNLASRVIAMVNKYFDGEIPTLGELTASDEAIIATQKRATEDSNAFIDTFAINEAL 418

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  LV E++ Y   Q+PW L K   N +R  TVL  TV  +  LAILL   +PK   +
Sbjct: 419 ASVWQLVDELNGYITEQEPWALSKDPANRERLGTVLATTVNGLGTLAILLSPVLPKATER 478

Query: 473 IFDIL 477
           ++  +
Sbjct: 479 LWSAI 483


>gi|257125470|ref|YP_003163584.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049409|gb|ACV38593.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 633

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/476 (43%), Positives = 306/476 (64%), Gaps = 13/476 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA PH+G AY  II DV+AR+ RL G +V F TG DEHGQKI +AA+  G
Sbjct: 5   FYITTPIYYPNAAPHVGTAYTTIICDVVARYKRLAGEEVGFMTGVDEHGQKIQEAAEKNG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + +VD+ S NF  +   L+IS  DF+RTT++RH  T R + KK+ DKGDIY+G Y G
Sbjct: 65  FTPQQWVDKMSLNFTTLWGKLNISNTDFLRTTQERHLKTVREIIKKVHDKGDIYRGEYVG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +  ++++    DG+Y   +   V+   E  YFF+LS Y++ LL + E +P+F
Sbjct: 125 KYSVSEETFVPENQL---VDGKYMGKEVIDVK---ETSYFFKLSKYENALLEHIEKNPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  ++NEVI+F+K GL+DLS+SR TFDWGI +  +  +I+YVW DAL  YLT  G+  
Sbjct: 179 IKPEGKKNEVIAFIKQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGAGF-- 236

Query: 247 NPDGSK-AKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  K  KFW      HV+GKDILRFHAI WPA L+SA + LP  + +HG+   +GEK+
Sbjct: 237 STDTEKFDKFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++P E +E+ G+DA RY+L+RE   G+D  Y K  + +R+NADLAN +GNL++
Sbjct: 297 SKSLGNVVNPEEEVEKYGLDAFRYYLMREATFGQDADYSKKAMVQRINADLANDLGNLLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M  K ++  +         D  +  +    L ++ +++ N     AL  +   +S 
Sbjct: 357 RTIGMQKKYFNSEVVLNEVEESFDIEVKELWKITLTDLDKHINNYQFSEALKDIWKFISR 416

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +++Y D  +PW+L K  +  DR STV+Y  V+ + ++A+L+  F+P+ A K+ + L
Sbjct: 417 MNKYIDECEPWKLSKDESQKDRLSTVMYNLVDSLYKIAVLISPFMPETAQKMINQL 472


>gi|116491711|ref|YP_811255.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118587385|ref|ZP_01544811.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|116092436|gb|ABJ57590.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118432209|gb|EAV38949.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 675

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/529 (39%), Positives = 318/529 (60%), Gaps = 24/529 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ + YI+T I YP+ +  +G+ Y  ++AD +ARFHR  G DV F TGTDEHG KI +
Sbjct: 1   MTKKNRFYITTPIYYPSGKLQLGNTYTTVLADSVARFHRALGEDVFFLTGTDEHGLKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG +   ++D+ + + + +  +++ISYD FIRTT++ H    + ++KK  D+GDIY
Sbjct: 61  KAEAAGKSEMEYLDEMAVSIKKLWKLMNISYDKFIRTTDEYHERVVQHIFKKFMDEGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ ++EE YFF++S Y D
Sbjct: 121 KGNYTGWYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGHEVQLVKEETYFFKMSKYSD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY  HPEF+ P  R NE+IS F+K GL+DL+L+R +F+WGI +P D ++++YVWID
Sbjct: 181 WLLQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWID 240

Query: 234 ALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           AL+NY+T  GY       D+      KFWPA+L ++GK+I+RFH IYWP  L +  LPLP
Sbjct: 241 ALSNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLP 300

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +V  HG+++ K  K+SKS GNV+ P  +    G+DA+RY+L+R +  G DG +  +   
Sbjct: 301 GEVLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLRSMPFGNDGVFSPEDFV 360

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            RVN DLAN +GNL++R++SMI +  +G IP        D  +    S+ ++  ++ M+ 
Sbjct: 361 NRVNFDLANDLGNLLNRTISMINRYENGQIPKLDKLLPEDRELEETASQAVENFKDEMEK 420

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAF 465
                AL  V +L+   ++Y D  +PW L K N  RA     +      +R +  LLQ  
Sbjct: 421 VHTADALEAVWTLIRRTNKYIDETEPWVLDK-NKQRAELDDAMAHLAASLRVVGSLLQPV 479

Query: 466 VPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +   KIFD L + +     N  F  +   +K   + H T  P+FPR 
Sbjct: 480 LTQAPKKIFDQLGLPEVEPISNLNFADIPSGIK--VVEHPT--PLFPRL 524


>gi|291541997|emb|CBL15107.1| methionyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 648

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/515 (39%), Positives = 315/515 (61%), Gaps = 11/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+  PHIGH Y  +  D +AR+ R+ G DV+F TGTDEHG KI +
Sbjct: 1   MCQKKPFYITTPIYYPSGNPHIGHCYTTVACDSIARYRRMQGYDVMFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT K +VD+  + F+ +   ++ISYD +IRTT+  H +T + ++K++ DKG IY
Sbjct: 61  KAAEKGVTPKEYVDEIVKTFKGLWKFMNISYDRYIRTTDDYHIETVQKIFKELYDKGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G   +        V   +EE YFF++S + D++    
Sbjct: 121 KGEYKGKYCTPCESFWTESQLIDGKCPEC----GREVTEAKEEAYFFKMSPFADRIEKLL 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +  +++ P  R  E+++ F+K GL+DL +SR TF WGI +  D ++I+YVW+DAL+NY+
Sbjct: 177 -TETDYLQPKTRAVELVNNFIKPGLEDLCVSRTTFKWGIPVTFDEKHIVYVWVDALSNYI 235

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY +       K+WPAD+H++ KDI+RFHAI WPA L++ +LPLPK +  HG+I   
Sbjct: 236 SALGYKNEKFDEFDKYWPADVHMVAKDIMRFHAIIWPAMLMALDLPLPKHLAVHGWITFN 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKSLGNV+DP  + E  G DA+RY ++RE+A G D  +  + +  R+N+DLANG+G
Sbjct: 296 GQKMSKSLGNVVDPFVLGERYGADAIRYHIMREMALGADSAFSNEIMINRINSDLANGLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+V+M+ K + G +PT     E D+ ++   + +  ++ + M    +  ALA++  
Sbjct: 356 NLVSRTVAMVQKYFGGTLPTERESGEFDDDLIETATSLRAKVDDFMDKTQLQNALAEIFK 415

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LVS  ++Y D   PW + K  T   R +TVLY  +E IR    LL AF+P    K  + +
Sbjct: 416 LVSRANKYIDETAPWVIAKDETKKARLATVLYNLLEAIRIACTLLSAFMPTTMPKALEQI 475

Query: 478 FVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
              ++   +++ D+   L     +HK  D +FPR 
Sbjct: 476 GACEKCAGYENCDKFGVLPADVTVHKG-DALFPRI 509


>gi|295094201|emb|CBK83292.1| methionyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 678

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/472 (43%), Positives = 300/472 (63%), Gaps = 9/472 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A     
Sbjct: 7   YITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAFENMQ 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD+ S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG Y G 
Sbjct: 67  TPKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGHYVGK 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ D ++    DG+  +    PVQ  +EE YFF++S YQDKL+ + E HPEFI
Sbjct: 127 YCTPCESFFTDGQL---IDGKCPDCGR-PVQEAKEEAYFFKMSKYQDKLMKHIEQHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245
            P  RRNE+++ F+K GL+DL +SR +F WGI +  DP++++YVW+DAL+NY+T  GY +
Sbjct: 183 QPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDALSNYITGLGYDV 242

Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D     K  K+WPADLH+IGKDILRFH +YWP  L++  LPLPK+VF H ++L    K+S
Sbjct: 243 DGKSDEKFYKYWPADLHLIGKDILRFHTVYWPIMLMALGLPLPKQVFGHPWLLQSDGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+   ++++  GVDA+R+F++ E+    DG    + + +R+N++LAN +GNLV+R
Sbjct: 303 KSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWELMVERLNSELANTLGNLVNR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM  K + G++         DE +  V      ++ E M    +  A+ ++ +L    
Sbjct: 363 TISMSNKYFGGIVTNTNVTEPVDEDLKKVVMDCRYKVAECMDKLKVADAITEIFALFKRC 422

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P+   KI 
Sbjct: 423 NKYIDETMPWALAKEEDKKDRLNTVLYNLVESIIIGATLLEPYMPETTEKIM 474


>gi|19704603|ref|NP_604165.1| methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|25009363|sp|Q8RE57|SYM_FUSNN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19714899|gb|AAL95464.1| Methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 636

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   V  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKDLTV--LKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N +    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDENKFDKFWNNSRVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G I +       D+ I S+ + V++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGTIVSSSTVEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K    +A  + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWTLAKNEAKKARLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNLKFDDIKEWSIFKEGHKLGEA-SPIFPR 510


>gi|296329050|ref|ZP_06871556.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296153854|gb|EFG94666.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 636

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/514 (41%), Positives = 317/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGFTPQAWTDKMTPNFKNMWTALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   V  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQL-NGSNKCPDCGKDLTV--LKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N +    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDENKFDKFWNNSRVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G I +       D+ I S+ + V++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGTIVSSSTAEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K    +A  + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWTLAKNEAKKARLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNLKFDDIKEWSIFKEGHKLGEA-SPIFPR 510


>gi|269796313|ref|YP_003315768.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098498|gb|ACZ22934.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 546

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/493 (41%), Positives = 295/493 (59%), Gaps = 21/493 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGHAY  +  DVL R+HR     V F TGTDEHGQK+ + A+ 
Sbjct: 13  QSFYLTTPIYYVNDAPHIGHAYTTVAGDVLTRWHRQRQERVWFLTGTDEHGQKVMRTAEA 72

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GVT + + D+    ++  + + LD   DDFIRTT+ RH +  +   + + DKG+IY G 
Sbjct: 73  NGVTPQEWADRLVESSWEPVLETLDARNDDFIRTTQPRHTERVQRFIQDLHDKGEIYAGS 132

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y G Y +  E Y    E+  G  G+Y   +       PV+ + E+ YFF++SAY D+LL+
Sbjct: 133 YEGPYCVGCEEYKLPGELLDGT-GEYEGLKLCPIHSRPVEMLSEQNYFFKMSAYADRLLA 191

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            YE HPEF+ P   RNEV++FVK GL+DLS+SR TFDWGI IP D  +++YVW DAL NY
Sbjct: 192 LYEEHPEFVQPASARNEVLAFVKGGLQDLSISRNTFDWGIPIPWDTSHVLYVWFDALLNY 251

Query: 239 LTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            T  G   + +  + +F   WPAD+H++GKDILRFHA+ WPA L++A LPLPK VF+HG+
Sbjct: 252 ATAIGLDSDDEAERERFASTWPADVHLVGKDILRFHAVIWPAMLMAAGLPLPKTVFAHGW 311

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P ++ +  G DA RY+ +R I  G+DG +  + L  R NA+LA
Sbjct: 312 LLVGGEKMSKSKLTGIAPTQITDVFGSDAFRYYFMRAIPFGQDGSFSWEDLSARYNAELA 371

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR  +MI K++ G +P PG+  +++ ++  V ++ + E    +     + A+ 
Sbjct: 372 NGFGNLASRVAAMISKNFGGSLPRPGSSGDAETALQQVAAKAVAEAEAAIDRISPNEAIN 431

Query: 416 QVISLVSEVDRYFDAQKPWELKK-----------TNPDRASTVLYVTVEVIRQLAILLQA 464
            V +LV   + Y   Q+PW++ K               R +T+L    E +R LA+LL  
Sbjct: 432 AVWALVDATNLYLTEQEPWKVAKLPGETTESGAGVEGGRLATILVTAAEALRTLAVLLNP 491

Query: 465 FVPKLANKIFDIL 477
            VPK A  ++  L
Sbjct: 492 VVPKAAEGLWTAL 504


>gi|260889017|ref|ZP_05900280.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861077|gb|EEX75577.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 633

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/513 (41%), Positives = 322/513 (62%), Gaps = 18/513 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA PH+G AY  II DV+AR+ RL G +V F TG DEHGQKI +AA+  G
Sbjct: 5   FYITTPIYYPNAAPHVGTAYTTIICDVVARYKRLTGEEVGFMTGVDEHGQKIQEAAEKNG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + +VD+ S NF  + + L+IS  DF+RTT++RH  T R + K++ DKGDIY+G Y G
Sbjct: 65  FTPQQWVDKMSLNFTTLWEKLNISNTDFLRTTQERHLKTVREIIKRVHDKGDIYRGEYVG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +  ++++    DG+Y   +   V+   E  YFF+LS Y++ LL + E +P+F
Sbjct: 125 KYSVSEETFVPENQL---VDGKYMGKEVIDVK---ETSYFFKLSKYENALLEHIEKNPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  ++NEVI+F++ GL+DLS+SR TFDWGI +  +  +I+YVW DAL  YLT  G+  
Sbjct: 179 IKPEGKKNEVIAFIRQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGAGFST 238

Query: 247 NPDGSKAKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + +    KFW      HV+GKDILRFHAI WPA L+SA + LP  + +HG+   +GEK+S
Sbjct: 239 DTEQFD-KFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV++P E +E+ G+DA RY+L+RE   G+D  Y K  + +R+NADLAN +GNL++R
Sbjct: 298 KSLGNVVNPEEEVEKYGLDAFRYYLMREATFGQDADYSKKAMVQRINADLANDLGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K ++  +         D  I  +    L ++ +++ N     AL  +   +S +
Sbjct: 358 TIGMQKKYFNSEVMLNEVEENFDIEIKELWKNTLVDLDKHVNNYQFSEALKDIWKFISRM 417

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW+L K  +  DR STV+Y  V+ + ++A+L+  F+P+ A K+ + L + D+
Sbjct: 418 NKYIDECEPWKLSKDESRKDRLSTVMYNLVDSLYKIAVLISPFMPETAQKMINQLGL-DK 476

Query: 483 NRCFQSLD-----QRLKPGFMLHKTFDPIFPRF 510
           +     LD     +    G  L++   P+FPR 
Sbjct: 477 DVTKLHLDDIREWKSYPAGNKLNEAV-PLFPRI 508


>gi|160893725|ref|ZP_02074509.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
 gi|156864710|gb|EDO58141.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
          Length = 678

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/478 (43%), Positives = 308/478 (64%), Gaps = 9/478 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A     
Sbjct: 7   YITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFQTGTDEHGQKIENKAFENMQ 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD+ S   +D+ D+++ SYD FIRTT+  H    + +++K+ D+GDIYKG Y G 
Sbjct: 67  TPKEFVDEISGEIKDIWDLMNTSYDKFIRTTDADHERQVQKIFRKLYDQGDIYKGEYVGK 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ D ++    DG+  +    PVQ  +EE YFF+LS YQD+L+ + E +P+FI
Sbjct: 127 YCTPCESFFTDSQL---VDGKCPDCGR-PVQEAKEEAYFFKLSKYQDRLMKHIEQNPDFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245
            P  R+NE+I+ F+K GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  GY +
Sbjct: 183 QPESRKNEMINNFIKPGLQDLCVSRTSFKWGIPVDFDDKHVIYVWIDALSNYITGLGYDV 242

Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D N D    K+WPADLH+IGKDILRFH IYWP  L++  +PLPK++F H +++    K+S
Sbjct: 243 DGNNDELYKKYWPADLHLIGKDILRFHTIYWPIMLMALGVPLPKQIFGHPWLIQNDGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+   +++   GVDA+R+F++ E+    DG    + + +R+N++LAN +GNLV+R
Sbjct: 303 KSKGNVMYADDMVRLFGVDAVRFFVLHEMPFENDGIISWELVVERINSELANTLGNLVNR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM  K + G++   G   E DE + +V      ++ E M    +  A++++ +L    
Sbjct: 363 TISMSNKYFGGVVTNTGVTEEVDEDLKNVVLNCRIKVAECMDKLKVADAISEIFTLFKRC 422

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++Y D   PW L K  T  DR +TVLY  VE I   A LL+ ++P  + KI + L  A
Sbjct: 423 NKYIDETMPWALAKDETKQDRLNTVLYNLVESIVIGASLLEPYMPDTSVKILNQLNAA 480


>gi|163814866|ref|ZP_02206254.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
 gi|158449805|gb|EDP26800.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
          Length = 678

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/472 (43%), Positives = 300/472 (63%), Gaps = 9/472 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A     
Sbjct: 7   YITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAFENMQ 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD+ S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG Y G 
Sbjct: 67  TPKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGHYVGK 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ D ++    DG+  +    PVQ  +EE YFF++S YQDKL+ + E HPEFI
Sbjct: 127 YCTPCESFFTDGQL---IDGKCPDCGR-PVQEAKEEAYFFKMSKYQDKLMKHIEQHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245
            P  RRNE+++ F+K GL+DL +SR +F WGI +  DP++++YVW+DAL+NY+T  GY +
Sbjct: 183 QPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDALSNYITGLGYDV 242

Query: 246 DNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D     K  K+WPADLH+IGKDILRFH IYWP  L++  LPLPK+VF H +++    K+S
Sbjct: 243 DGKSDEKFYKYWPADLHLIGKDILRFHTIYWPIMLMALGLPLPKQVFGHPWLIQSDGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+   ++++  GVDA+R+F++ E+    DG    + + +R+N++LAN +GNLV+R
Sbjct: 303 KSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWELMVERLNSELANTLGNLVNR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM  K + G++         DE +  V      ++ E M    +  A+ ++ +L    
Sbjct: 363 TISMSNKYFGGIVTNTNVTEPVDEDLKKVVMDCRYKVAECMDKLKVADAITEIFALFKRC 422

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P+   KI 
Sbjct: 423 NKYIDETMPWALAKEEDKKDRLNTVLYNLVESIIIGATLLEPYMPETTEKIM 474


>gi|238917941|ref|YP_002931458.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873301|gb|ACR73011.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 657

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/492 (41%), Positives = 313/492 (63%), Gaps = 14/492 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI   A+ AG
Sbjct: 8   FYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELKAEEAG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG Y G
Sbjct: 68  ITPKEFVDNVSTEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGSYEG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E+++ + ++    DG+  +     V+  +EE YFF++S Y +KL+ +  +HPEF
Sbjct: 128 MYCTPCESFWTESQL---VDGKCPDCGRE-VKPAKEEAYFFKMSKYANKLIEHINTHPEF 183

Query: 187 ILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           I P+ R+NE++ +F+  GL+DL +SR +F WGI +  D ++++YVW+DALTNY+T  GY 
Sbjct: 184 IQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGIGY- 242

Query: 246 DNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            + DG+ +    KFWPADLH+IGKDI+RFH IYWP FL++   PLPK+VF H ++L    
Sbjct: 243 -DADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQNDG 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNL
Sbjct: 302 KMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           V+R+++M  K + G++   G    + D  + +V +    +++  M    +  A+ +V +L
Sbjct: 362 VNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRDKVQAKMATLHVADAITEVFTL 421

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+  +KI   L+
Sbjct: 422 FKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQLY 481

Query: 479 VADENRCFQSLD 490
            A+     +  D
Sbjct: 482 PANPEAGVRDFD 493


>gi|81429270|ref|YP_396271.1| methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|78610913|emb|CAI55965.1| Methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 681

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/519 (39%), Positives = 318/519 (61%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   Y++T I YP+ +  IG++Y  I ADV+AR+ RL G DV F TGTDEHG K+ + A
Sbjct: 4   KKPTFYVTTPIYYPSGKLTIGNSYTTIAADVIARYKRLMGFDVFFLTGTDEHGLKLEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +  + +VD  +   + +   L+IS D FIRTT+  H    + ++ ++ ++GDIY G
Sbjct: 64  AEKNLAPQAYVDGMAEEIQALWKTLEISNDKFIRTTDDYHVKAVQKIFDRLVEQGDIYLG 123

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EVYK  +G+    +    + VQ + EE Y F++S Y D+L
Sbjct: 124 QYEGWYSVSDEEYFTESQLTEVYKDENGKVIGGKAPSGHEVQRVAEETYKFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L+YYE H +FI P  R+NE+I+ F+K GL+DLS+SR +FDWGI +  +P++++YVW+DAL
Sbjct: 184 LAYYEEHADFIEPSSRKNEMINNFIKPGLEDLSVSRISFDWGIHVTGNPKHVVYVWLDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY+T  GY  + D    K+WPAD+H++GK+I+RFHAIYWP FL++  LPLPK++F HG+
Sbjct: 244 SNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFLMALGLPLPKQIFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N DLA
Sbjct: 304 LLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRAIPFGNDGVFTPEDFVSRINYDLA 363

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K  DG +P+  A  T  D  + +  ++ + +    M       AL
Sbjct: 364 NDLGNLLNRTVAMINKYDDGHVPSYQADVTAFDADLQATATQTIAQYSTLMDQLKFSDAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             +  L+S  ++Y D  +PW L K +  +A   +VL    E +R +A+LLQ  +     +
Sbjct: 424 DTIWQLISRANKYIDETEPWVLAKDDSRKAELDSVLAHLAESLRIVALLLQPVMTHAPRE 483

Query: 473 IFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +F  L +  D+    + +  R      +     PIFPR 
Sbjct: 484 MFAQLGLDFDQEAQREMVYGRFPSDIKVIAKGTPIFPRL 522


>gi|326693554|ref|ZP_08230559.1| methionyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 702

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/523 (40%), Positives = 320/523 (61%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDQTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVFFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGV+   ++D  +   + +  ++DISYDDFIRTTE RH    + ++  + +KGDIY
Sbjct: 93  KAKAAGVSEIAYLDGMAEQIKALWQLMDISYDDFIRTTEPRHEKAVQKIFTTLLEKGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+  +GQ    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDENGQVTGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+ F+  GL+DL+++R   DWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +      K WPA++ ++GK+I+RFH IYWP  L +  + LPK +  H
Sbjct: 273 ALSNYITALGYDTDDTALFDKLWPANVQLVGKEIVRFHTIYWPIMLHALGIDLPKTIIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G+++ K  K+SKS GNVI P EV+EE  G+DA+RY+L+R +  G DG +  +    RVN 
Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEERYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K  +G++P      T+ DE ++      + +  ++ Q     
Sbjct: 392 DLANDLGNLLNRTVAMINKYENGIVPELHTGKTDFDEGLVQTIEVAIVDYNKHFQAMRTA 451

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  V +++   ++Y D  +PW L K    +A  S V+      +R  A+LLQ  + + 
Sbjct: 452 DALESVWTIIRRANKYIDETQPWVLAKDETQKAVLSNVMAHLAGALRVAAVLLQPVLTQA 511

Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
             KI++ L F   EN  +       +L  G  + K  +PIFPR
Sbjct: 512 PKKIYEQLGFDYPENGVKIAGLTFGKLPTGGQVVKKGEPIFPR 554


>gi|237838135|ref|XP_002368365.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211966029|gb|EEB01225.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 976

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/488 (41%), Positives = 295/488 (60%), Gaps = 20/488 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++REK YI+TAI Y N  PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA  
Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F+ M   L +S D +IRTT+  H   C+ LWK++ ++GDIY 
Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392

Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y GWY+ R+E + ++ E     YK            P+Q MEE  YFFR+S YQ +L+
Sbjct: 393 DTYVGWYNEREETFVSESEARLTDYKDP------TTGKPLQKMEEPSYFFRMSKYQARLV 446

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +   +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTN
Sbjct: 447 KHINENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTN 506

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y + T  + N DG++A FWPAD+H+IGKDI+ FH + WP  L++A+LPLPK VF HGF+ 
Sbjct: 507 YYSAT--VMN-DGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVT 563

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKSLGNV+DP ++++    D+ R++LVRE   G D  +D+D L    NA+LA+
Sbjct: 564 AADGEKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELAD 623

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
            +GNLV R+ S+ +K  +G +P P +     ++  S+   V +   E +  Q  +  AL 
Sbjct: 624 TLGNLVHRATSLCVKFCEGKVP-PVSLPAEGKAPFSIPDTVGE--MERLVGQFGLREALE 680

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++   E +++     PW L  T+      V+   +E +  L  LL+ F+P  A+ IF 
Sbjct: 681 VAMNACREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFK 738

Query: 476 ILFVADEN 483
            L  A + 
Sbjct: 739 KLNTAPKT 746


>gi|221484363|gb|EEE22659.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 976

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/488 (41%), Positives = 295/488 (60%), Gaps = 20/488 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++REK YI+TAI Y N  PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA  
Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F+ M   L +S D +IRTT+  H   C+ LWK++ ++GDIY 
Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392

Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y GWY+ R+E + ++ E     YK            P+Q MEE  YFFR+S YQ +L+
Sbjct: 393 DTYVGWYNEREETFVSESEARLTDYKDP------TTGKPLQKMEEPSYFFRMSKYQARLV 446

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +   +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTN
Sbjct: 447 KHINENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTN 506

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y + T  + N DG++A FWPAD+H+IGKDI+ FH + WP  L++A+LPLPK VF HGF+ 
Sbjct: 507 YYSAT--VMN-DGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVT 563

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKSLGNV+DP ++++    D+ R++LVRE   G D  +D+D L    NA+LA+
Sbjct: 564 AADGEKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELAD 623

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
            +GNLV R+ S+ +K  +G +P P +     ++  S+   V +   E +  Q  +  AL 
Sbjct: 624 TLGNLVHRATSLCVKFCEGKVP-PVSLPAEGKAPFSIPDTVGE--MERLVGQFGLREALE 680

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++   E +++     PW L  T+      V+   +E +  L  LL+ F+P  A+ IF 
Sbjct: 681 VAMNACREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFK 738

Query: 476 ILFVADEN 483
            L  A + 
Sbjct: 739 KLNTAPKT 746


>gi|221505659|gb|EEE31304.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 976

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/488 (41%), Positives = 295/488 (60%), Gaps = 20/488 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++REK YI+TAI Y N  PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA  
Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F+ M   L +S D +IRTT+  H   C+ LWK++ ++GDIY 
Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392

Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y GWY+ R+E + ++ E     YK            P+Q MEE  YFFR+S YQ +L+
Sbjct: 393 DTYIGWYNEREETFVSESEARLTDYKDP------TTGKPLQKMEEPSYFFRMSKYQARLV 446

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +   +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTN
Sbjct: 447 KHINENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTN 506

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y + T  + N DG++A FWPAD+H+IGKDI+ FH + WP  L++A+LPLPK VF HGF+ 
Sbjct: 507 YYSAT--VMN-DGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVT 563

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKSLGNV+DP ++++    D+ R++LVRE   G D  +D+D L    NA+LA+
Sbjct: 564 AADGEKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELAD 623

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
            +GNLV R+ S+ +K  +G +P P +     ++  S+   V +   E +  Q  +  AL 
Sbjct: 624 TLGNLVHRATSLCVKFCEGKVP-PVSLPAEGKAPFSIPDTVGE--MERLVGQFGLREALE 680

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             ++   E +++     PW L  T+      V+   +E +  L  LL+ F+P  A+ IF 
Sbjct: 681 VAMNACREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFK 738

Query: 476 ILFVADEN 483
            L  A + 
Sbjct: 739 KLNTAPKT 746


>gi|295106117|emb|CBL03660.1| methionyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 531

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/519 (41%), Positives = 294/519 (56%), Gaps = 22/519 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
            +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A   G+T
Sbjct: 8   FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAAAKGMT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     FRD  D+L I+Y DF+RTTE RH  + +  W+++ DKG  YKG Y GWY
Sbjct: 68  PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAKSVQKFWQELYDKGWCYKGSYEGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186
            + +E YY + ++ K  +GQ        PVQ    EE +FF+LS + DKLL++YE +P+F
Sbjct: 128 CVHEETYYAESDLEKNDEGQLVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT  GY D
Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247

Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  G   + WP   H +GKDI RFH + WPA LL+A +P+   VF HGF+L KGEK+S
Sbjct: 248 EGERAGEFDRRWPMQYHFVGKDITRFHCVIWPAMLLAAGMPITHTVFGHGFLLTKGEKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN + P ++    GVDA RY+ + ++  G DG    + + +  NADLAN  GNL SR
Sbjct: 308 KSKGNALKPADLCRVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL--------IHRALAQ 416
             +M  K +DG +P   A      +   V +  L+EI E +  +            A A 
Sbjct: 368 VFNMTKKYFDGQVPEVPA-----SAAALVGANPLREITEELYAEYDRALGDVDFTAAAAT 422

Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  L   V+ Y +   PW L K     D  + V+Y  +E IR +A+ L  F+P  + ++F
Sbjct: 423 VQKLAGRVNLYVEESAPWNLAKNEETADELAAVIYNALEAIRIIALYLAPFMPNTSAEVF 482

Query: 475 DILFVADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510
             L + D         +      P     +  DP+FPR 
Sbjct: 483 RRLSLGDITAVTDIEAATAWGQLPAGNAVEIGDPLFPRL 521


>gi|91202480|emb|CAJ72119.1| strongly similar to methionyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 520

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/510 (40%), Positives = 315/510 (61%), Gaps = 14/510 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  Y++T I Y N  PHIGH+Y  I ADVLAR+ RL   DV F TG+DEHGQKI KAA+
Sbjct: 3   RQSFYLTTPIYYVNDIPHIGHSYTTIAADVLARYRRLQQYDVFFLTGSDEHGQKIQKAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T   FVD     F+D+ + L+IS DDFIRTT++RH    + +++K+ + GDIY G 
Sbjct: 63  ACNKTPNDFVDMVVGKFKDLWENLNISNDDFIRTTDERHVKRVKKIFQKLFENGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++ + ++    +G+    + N V+ ++E+ YFFRLS YQ  L+ +Y+ H
Sbjct: 123 YEGRYCVPCESFWTETQL---DEGRCPECRRN-VEKVKEKNYFFRLSKYQKPLIEHYDKH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++  + S ++D+S+SR    WGI++P D    +YVWIDAL NY+T  G
Sbjct: 179 PEFIQPESRRNEILQRITSHIEDISISRSAVTWGIQVPMDTTQTIYVWIDALLNYITALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D+ +  + K+WPA++H+IGK+IL FH   WPA L+S  + LP K+F+HG+   +G+KI
Sbjct: 239 YDDDMELFQ-KYWPANVHIIGKEILWFHGAIWPAILMSLKIELPFKIFTHGWWTIEGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+ +I+  G DA RYF++RE+  G DG +    L  R+N+DL N +GNL+ 
Sbjct: 298 SKSLGNAIDPLNIIQIYGTDAYRYFILREVPFGSDGNFSYTALTNRINSDLGNDLGNLLQ 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K +D +IP    ++E D+ +  +    L +I + + N    +AL  +   V  
Sbjct: 358 RTLTMIEKYFDAVIP---EYSEKDDVLKEISQNTLSKINKELDNLQFSKALEAIWEFVGS 414

Query: 424 VDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++  + +KPW L KT+    +   V+    + I+ ++I++  F+P    +I   L + +
Sbjct: 415 ANKCIEEKKPWVLAKTSAYKPQLKNVISSLAKAIKDISIVIYPFMPNTCIEIQKQLGILE 474

Query: 482 ENR--CFQSLDQRLKPGFMLHKTFDPIFPR 509
            N   C +   Q +K G ++ K   P+FPR
Sbjct: 475 NNESPCLE-YQQIIKSGVIVKKG-KPLFPR 502


>gi|323351085|ref|ZP_08086742.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122809|gb|EFX94518.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 679

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 319/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +PT     T+ D ++  V ++ + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K  +     + V+   V  +R +A +++ F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLVASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|242309749|ref|ZP_04808904.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523750|gb|EEQ63616.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 643

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/477 (44%), Positives = 305/477 (63%), Gaps = 9/477 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  IIAD LARFHRL G +VLF TGTDEHGQKI ++AQ  
Sbjct: 4   KFYITTPIYYVNDIPHIGHAYTTIIADTLARFHRLLGDEVLFLTGTDEHGQKIQQSAQKN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K +VD+ S  FR++ D   I YD FIRTT+  H +T + ++ K+  KGDIYKG Y 
Sbjct: 64  GKNPKEYVDEISSRFRNLWDSFGIGYDWFIRTTDSYHKETAQNVFLKMFQKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++ +         + N    ++EE YFFRLSAY D+LL + E +PE
Sbjct: 124 GNYCVSCESFFAKSQLIEQKKCPDCGKETN---LLKEESYFFRLSAYGDRLLQWIEQNPE 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242
            ILP  RRNEVI+F+K GL+DLS++R +FDWGIK+P+   D +++MYVW+DAL NYL+  
Sbjct: 181 CILPKMRRNEVINFIKEGLEDLSITRTSFDWGIKLPNEIGDSKFVMYVWLDALVNYLSAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY +N + +K  FWPA+ H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+    G K
Sbjct: 241 GYQNNLE-NKMDFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGWWTKDGAK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P EV+E  G+D  RYF++RE+  G+DG + +  L +R NADL N +GNL+
Sbjct: 300 MSKSIGNVVNPKEVVESYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLGNDLGNLL 359

Query: 363 SRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R + M  K +D  +     ++  + +  +     +L  + + MQ   I+R L ++  L 
Sbjct: 360 NRLLGMSAKYFDNTLNVDLESYQNAYKMEIEEIKAILGNLNKMMQEVQINRYLEELWRLF 419

Query: 422 SEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  +     ++PW+L K N     + +L     ++ + A+ L   +P+ A KI  + 
Sbjct: 420 NLANGIIAKKEPWKLIKENKQAEVAELLIFVANLLIKGALCLYPCMPESAKKIMSVF 476


>gi|162447002|ref|YP_001620134.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985109|gb|ABX80758.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 516

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/478 (43%), Positives = 314/478 (65%), Gaps = 8/478 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YISTAIAY +A PHIG+ YE+I+AD +ARF RL+G DV F TGTDEHGQKI   A
Sbjct: 2   DKKKYYISTAIAYASAIPHIGNVYEIILADAIARFKRLEGYDVYFQTGTDEHGQKIENNA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +N  + T  +VD  S   + + +++++ YD FIRTT+  H +  + +++K+ ++GDIY G
Sbjct: 62  RNQNLETSDYVDMISNEIKRIFELVNVKYDKFIRTTDTYHKEVVQNIFEKLLEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWYS+ DEA+ N  ++  G       +   PV WM E+ YFF+LS YQD+++ + + 
Sbjct: 122 KYEGWYSVADEAFLNKADIVDGLAP----SGDIPV-WMSEDTYFFKLSKYQDRIVKHIKD 176

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P FI P  RRNEV+ SF+   L DLS+SR +F WGI +  +P++++YVWIDAL+NY+T 
Sbjct: 177 NPSFIEPENRRNEVLQSFLSEKLPDLSVSRTSFKWGIPVKSNPEHVIYVWIDALSNYITG 236

Query: 242 TGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY LD+   +   FWPADLH+IGKDI+RFHA+YWPA LL+  LPLPKK+F H ++L   
Sbjct: 237 LGYNLDSNSDAMKDFWPADLHLIGKDIMRFHAVYWPALLLALGLPLPKKIFGHPWVLVDK 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GN +    +++  GVDALRY+++ EI    DG    + + +R N+DLAN +GN
Sbjct: 297 NKMSKSVGNTLYTDNLVKHFGVDALRYYVLHEIPFAADGNITYELMIERNNSDLANTLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++ M+ K  +G++         D S+ + C  +L ++   M    +  A+ +++ +
Sbjct: 357 LVNRTIGMVNKYQNGLVKKVIINEPFDYSLKNKCEALLDKVSTLMNELRVGDAIEELMIV 416

Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               ++Y D  +PW L K    ++ S VLY  VE IR LA+ LQ+++P+ A KIF+ L
Sbjct: 417 ARAANKYIDLSEPWNLNKNGETEKLSHVLYSLVETIRFLAVFLQSYMPETALKIFEQL 474


>gi|152990541|ref|YP_001356263.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422402|dbj|BAF69906.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 632

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/518 (40%), Positives = 313/518 (60%), Gaps = 27/518 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  IIAD  AR+ RL+G D  F TGTDEHGQKI +AA+ 
Sbjct: 2   KKRYITTPIYYVNDVPHIGHAYTTIIADSAARYFRLNGYDTFFLTGTDEHGQKIEEAAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D+ S  F+ + D  +ISYD FIRTT   H    +  ++K+ +KGDIYKG Y
Sbjct: 62  RGKTPQEYADEISAKFKALWDEFEISYDKFIRTTNPEHIIGVQKAFEKMYEKGDIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  EA++ + ++    D ++          ++EE YFF+LS YQDKLL  Y ++ 
Sbjct: 122 EGHYCISCEAFFPESQL---IDEEFCPDCGKQTSIVKEESYFFKLSKYQDKLLELYRTND 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
            F+LP  ++NEVI FV+SGL+DLS++R +FDWGIK+P   +DP+++MYVW+DAL NY+T 
Sbjct: 179 AFVLPKNKKNEVIRFVESGLQDLSITRTSFDWGIKLPKSINDPKHVMYVWLDALLNYITA 238

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D     +WPAD H++GKDILRFHA+YWPAFL+S +LP P  + +HG+    GE
Sbjct: 239 LGY--GSDEKLMYYWPADFHLVGKDILRFHAVYWPAFLMSLDLPQPHHIATHGWWTRNGE 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP +V +  G++  RYFL+RE+  G+DG + +  L  R+N DL N +GNL
Sbjct: 297 KMSKSKGNVIDPKKVADAYGLENFRYFLLREVPFGQDGDFSQKALIDRINNDLGNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QLI-----HRAL 414
           ++R + M  K +D        FT   + +     + LQEI+  + N   L+     +R L
Sbjct: 357 LNRIIGMSGKYFD--------FTVDSKDVQKFHQKELQEIQSIIANLDSLVDEMKWNRYL 408

Query: 415 AQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++  ++   ++  D   PW ++K+   D A  ++ +   ++ ++A+LL   +PK   KI
Sbjct: 409 EEIWKMLHIANKAIDTYAPWAKMKEGKADEAMALVALVSNILAKVALLLHPVMPKTTQKI 468

Query: 474 FDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
            + L    +   F +      L   F + K   P+FP+
Sbjct: 469 AEALGFTIDQSSFDTFIHQSNLLDTFTIQK-IPPLFPK 505


>gi|260655495|ref|ZP_05860983.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629943|gb|EEX48137.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 642

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/509 (43%), Positives = 312/509 (61%), Gaps = 8/509 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N  PHIGHAY  I ADV+ARF R+ G DV F TGTDEHGQK+A+AA  
Sbjct: 3   KSFYITTPIYYVNDIPHIGHAYTTIAADVMARFKRMSGYDVFFLTGTDEHGQKVAQAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +   D  S  FR++  V+  S DDFIRTT++RH  T + +++K+  +GDIYKG Y
Sbjct: 63  KGVDPQKLTDGLSEKFRELLPVIGASNDDFIRTTQERHIKTVQAIFQKLLAQGDIYKGTY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  EAY  +       +G+       P+  MEEE YF R SA+ DKLL++YE++P
Sbjct: 123 KGLYCVPCEAYVPES---SAGEGRTCPDCGRPLIEMEEESYFLRTSAWADKLLAFYEANP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             I P +R NEV+SF++ GLKD S+SR T  W I +P D ++ +YVW DAL NYLT  GY
Sbjct: 180 NAIGPQQRYNEVVSFLRGGLKDQSISRTTVKWAIPVPGDERHTIYVWFDALINYLTACGY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +     A FWP   H++GKDI+RFH I WP  L+   L  PK+VFSHG+   +GEK+S
Sbjct: 240 GTDQKKMDA-FWPEVNHLVGKDIIRFHCIIWPIMLMMLGLTPPKQVFSHGWWTVEGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN ++P E+I   G DA RYFL R++  G DG + ++ L K++N+DLAN +GNL+SR
Sbjct: 299 KSKGNAVNPHEMIGRYGRDAFRYFLFRQMPFGLDGDFSEEALAKQINSDLANDLGNLLSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +V+M +K  +G++  P      DE + ++ ++  +E R  M       AL  + SL+S  
Sbjct: 359 TVTMAVKYQEGVVAAPQKREALDEEVAALGAKTAEEYRSLMDGYGFEDALKALWSLISRA 418

Query: 425 DRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481
           ++Y D   PW+L    N +R + VLY   EV+R  A+ +  F+P+ AN+I++ L +A   
Sbjct: 419 NKYIDETMPWKLSGPENAERLNQVLYTLCEVLRLSALGVAPFMPESANRIWEQLGLAGSP 478

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+  ++S        +  H+  D +FPR 
Sbjct: 479 ESVGWESWKWGGVEEYRTHRG-DALFPRI 506


>gi|307708991|ref|ZP_07645451.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620327|gb|EFN99443.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 665

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/521 (39%), Positives = 315/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520


>gi|296111172|ref|YP_003621553.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832703|gb|ADG40584.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 703

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/523 (40%), Positives = 320/523 (61%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVHFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++   ++D  +++ + +  ++DISYDDFIRTTE RH    + ++  + +  DIY
Sbjct: 93  KAQAAGISEIDYLDGMAKDIKTLWSLMDISYDDFIRTTEDRHEKAVQKIFTTLLENDDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV++  DG     +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVFRDEDGNMIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+SHPEFI P  R NE+I+ F+  GL+DL+++R + DWGI +P D ++++YVWID
Sbjct: 213 WLLEYYKSHPEFIQPEARMNEMINNFIAPGLEDLAVTRASVDWGIPVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +   +  KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALSNYITALGYDSDNTEAFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G+++ K  K+SKS GNVI P EV+E   G+DA+RY+L+R +  G DG +  +    RVN 
Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEARYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G++P      T+ DE ++      +    +N +     
Sbjct: 392 DLANDLGNLLNRTVAMINKYEGGVVPQLQTGQTDFDEDLVRTVEEAIVSYNQNFKALRTA 451

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  V  ++   ++Y D  +PW L K +  +A  S V+      +R +A+LLQ  + + 
Sbjct: 452 DALENVWVIIRRANKYIDETQPWVLAKDDTQKAILSNVMAHLAGALRIVAVLLQPVLTQA 511

Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
             KI++ L F   EN  R       +L  G  + K  +PIFPR
Sbjct: 512 PRKIYEQLGFEYPENGVRIAGLTFGQLPTGGKVVKKGEPIFPR 554


>gi|325115535|emb|CBZ51090.1| methionine--tRNAligase, related [Neospora caninum Liverpool]
          Length = 982

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/481 (41%), Positives = 289/481 (60%), Gaps = 18/481 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K RE+ YI+TAI Y N  PH+GH YE + +DV+ARFHR+ G +V F TGTDEHGQKIA  
Sbjct: 271 KTRERFYITTAINYTNGPPHMGHVYEAVTSDVVARFHRIAGKEVFFLTGTDEHGQKIANT 330

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F++M   L IS D +IRTT+  H   C+ LWK++ +KGDIY 
Sbjct: 331 AERVGKTPQEICDFFAAGFQEMNKKLHISNDQYIRTTQADHKAVCQWLWKRVQEKGDIYL 390

Query: 122 GCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y GWY+ R+E + ++ E     YK            P+Q MEE  YFFR+S YQ++LL
Sbjct: 391 DTYVGWYNEREETFVSEIEARLTDYKDP------TSGKPLQKMEEASYFFRMSKYQERLL 444

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +   +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTN
Sbjct: 445 KHIHDNPDFIRPEERRKNILKRLEEPLLDLSCSRTTFTWGVPVPGDEKHVMYVWFDALTN 504

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y + T      DG+++ FWPA++H+IGKDI+ FH + WP  L++A LPLPK VF HGF+ 
Sbjct: 505 YYSATAM---NDGARSAFWPANVHIIGKDIIWFHTVIWPCMLMAAELPLPKCVFGHGFVT 561

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKSLGNV+DP ++++E   D+ R++LVRE   G D  +D+D L    NA+LA+
Sbjct: 562 AADGEKMSKSLGNVVDPNDILKEHDADSFRFYLVRETKYGNDLRFDEDALTATTNAELAD 621

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNLV R+ S+ +K   G +P         ++  S+   V  E+   ++   +  AL  
Sbjct: 622 TLGNLVHRATSLCVKFCGGRVPA-VPLPAGGKAPFSIADTV-GEMERLVEQFALREALEA 679

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++   E +++     PW L   +P     V+   +E +  LA LL+ F+P  +  IF  
Sbjct: 680 AMNACREANKFVTDWAPWSLP--DPVEKQRVVRGALEAVFVLAHLLEPFIPVTSAHIFKK 737

Query: 477 L 477
           L
Sbjct: 738 L 738


>gi|284046700|ref|YP_003397040.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950921|gb|ADB53665.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 501

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/473 (41%), Positives = 285/473 (60%), Gaps = 11/473 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y NAQPH+GHAY  I ADVLAR  R  G DV F TGTDEHG+ +A AA   G+
Sbjct: 4   YVTTPIYYVNAQPHLGHAYTTIAADVLARHMRQRGEDVFFLTGTDEHGEPVALAADRLGL 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K   D+N+  F +M   L++S D FIRT++ RH    + + ++I D G  Y G Y GW
Sbjct: 64  APKELADRNAARFEEMMPRLNVSNDFFIRTSDPRHVKKVQEVMQRIHDNGHTYLGTYEGW 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           +  R   +  ++E+   A+G      H P+   +EE +FFRLS +Q+ L   Y   P++ 
Sbjct: 124 FCPRCADFKGENEI---AEGNTCPIHHIPLDREKEENWFFRLSTFQEPLERLYAEQPDWA 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNE ++F++SGL+D+SLSR  F WG+ +  DP ++ YVW DAL NY T   +   
Sbjct: 181 APPTRRNEALAFIRSGLRDVSLSRGKFTWGVPVTWDPSHVFYVWFDALLNYYTALSFARE 240

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +    +FWPADLHVIGKDIL+FHA+YWPA L++A+LPLP++   HG++L  GEK+SKSL
Sbjct: 241 GEDLTERFWPADLHVIGKDILKFHAVYWPAMLMAADLPLPRREMIHGYLLMDGEKMSKSL 300

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+DP EVI+  G DALRY+ +RE++ G+DG     G + R  ++LAN  GNL SR+++
Sbjct: 301 GNVLDPFEVIDRFGTDALRYYCLREVSFGQDGSVSTAGFESRYESELANEYGNLASRTLA 360

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M+ +  DG++P              VC  V   + +   +Q    AL  +   V  ++RY
Sbjct: 361 MVARYRDGVVPAVATDAALAADFAGVCDDVAALLDKAEPSQ----ALEAIWQRVRRLNRY 416

Query: 428 FDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + + PW+L + +P  A  +   L    E +R + +LL  ++P+ A+K    L
Sbjct: 417 VEERAPWKLAR-DPAAAGQLDETLATLAEGLRVVTVLLHPYIPESADKALAAL 468


>gi|50955324|ref|YP_062612.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951806|gb|AAT89507.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 529

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/522 (40%), Positives = 301/522 (57%), Gaps = 15/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +    YI+T I Y N  PHIGHAY  + ADVLAR+ R  G D    TGTDEHGQKI +
Sbjct: 1   MSDGSSFYITTPIFYVNDVPHIGHAYTEVAADVLARWRRQAGDDTWLLTGTDEHGQKILR 60

Query: 61  AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A   G T K + D+  R+ +  +   +DI+ DDFIRTT++RH    +   +K+ D G I
Sbjct: 61  TATANGTTPKEWADRLVRDEWLPLLTTVDIANDDFIRTTDERHEKNVQKFLQKLYDDGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y G Y   Y +  E +    E+  G    AD +       P++ ++E+ YFFR+S + +K
Sbjct: 121 YAGEYEALYCVGCEEFKPQSEIVDGTGEYADQKVCAIHSKPLELLQEKNYFFRMSDFAEK 180

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL+ YE  P+F+ P   RNEV+SFV+ GL DLS+SR +FDWGIK+P D  +++YVW DAL
Sbjct: 181 LLALYEERPDFVQPESARNEVVSFVRQGLSDLSISRSSFDWGIKVPWDESHVVYVWFDAL 240

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY  + +  + + WPA  H++GKDILRFHA+ WPA LL+A L +P +VF HG+
Sbjct: 241 LNYITAVGYGQDEEAFERR-WPA-THLVGKDILRFHAVIWPAMLLAAGLEVPHRVFGHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P ++ +  G DA RY+ +R I  G+DG +  + L  R  A+LA
Sbjct: 299 LLVGGEKMSKSKLTGIAPTQITDTFGSDAFRYYFLRAINFGQDGSFSWEDLSARYQAELA 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR V+M+++ + G +P  G F E+D  +  V ++   +    M    IH  +A
Sbjct: 359 NGFGNLASRVVAMVMRYFGGEVPAAGEFREADLEVQRVVAQAAADADAAMARLAIHDGIA 418

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V ++V +++ Y   Q+PW L K     +R  TVLY  VE +R LA+LL   +PK    +
Sbjct: 419 AVWTIVDQLNGYITEQEPWALAKDEAKRERLQTVLYTAVEGLRALAVLLSPVIPKATAAL 478

Query: 474 FDILFVA------DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +  L V       D  R   + D    P        + +FPR
Sbjct: 479 WTALGVEGELGGLDAQRLRSAGDWGQVPAGTAVNGLEALFPR 520


>gi|237742263|ref|ZP_04572744.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429911|gb|EEO40123.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 636

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/514 (40%), Positives = 315/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++  G++      +   ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQL-NGSNKCPDCGKE--LRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +N D    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 F-ENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y    +  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKSIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++ +I         D+ I ++   +++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNSVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPR 510


>gi|324993726|gb|EGC25645.1| methionine--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 679

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V S  + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+   V  +R +A +++ F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLVASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SQAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|257063479|ref|YP_003143151.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791132|gb|ACV21802.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 526

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/514 (39%), Positives = 296/514 (57%), Gaps = 14/514 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
            +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQKIA+ A+  G T
Sbjct: 8   FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGLDEHGQKIAETAEKNGTT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     F +  D+LDI+Y DF+RT+  R   T +  W  I +KG +YK  Y GWY
Sbjct: 68  PQAWCDSMVPAFDEAWDMLDITYTDFVRTSSDRQTRTVQKFWNDIYEKGYLYKSAYEGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWME--EEGYFFRLSAYQDKLLSYYESHPE 185
            + +E YY + ++ K  DG++       PV+ M   EE +FF+LS +Q+ LL +YE HP+
Sbjct: 128 CVHEETYYAESDLEKNEDGEFICPDCKRPVRHMASGEENWFFKLSEFQEPLLKFYEEHPD 187

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV++FVKSGL+DLS+SR TFDWGI +P D  ++ YVW DAL  YLT  GY 
Sbjct: 188 FIRPETRRNEVVTFVKSGLQDLSISRSTFDWGIPLPFDEGHVCYVWADALLAYLTGIGYA 247

Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D   +G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L  GEK+S
Sbjct: 248 DPEREGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPVTGTVFGHGFLLVGGEKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P ++++  G DA RY+ + ++  G DG    + + +  NADLAN  GNL SR
Sbjct: 308 KSKGNGIKPADLVKVYGSDAYRYYFMSDVRFGHDGNISIERMTQVYNADLANTWGNLCSR 367

Query: 365 SVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +M+ K +DG +P  P    +++  + ++   +  ++   M       A+A +  L   
Sbjct: 368 VFNMVGKYFDGKVPEVPAELKDAENPLRTIAEGLYAKVDPCMAEVNFTDAVAAIQELAGA 427

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF-----DI 476
            + Y +   PW L K+   +   + VLY  +E  R +A+    F+P+ + ++F     D 
Sbjct: 428 ANLYVEQSAPWNLAKSEETKGELAAVLYNALEACRIMALFFAPFMPRTSAEVFRRLGLDD 487

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   D+     +  Q L  G  + K  DP+FPR 
Sbjct: 488 ITAVDDIEAASAWGQ-LPAGNPVEKG-DPLFPRL 519


>gi|313682539|ref|YP_004060277.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155399|gb|ADR34077.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 649

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/510 (40%), Positives = 304/510 (59%), Gaps = 13/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N + HIGHAY   IAD LAR  RL G +  F TGTDEHGQKI ++A   
Sbjct: 2   KNYITTPIYYVNGEAHIGHAYTTFIADTLARHSRLIGNETYFLTGTDEHGQKIEESAVKQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              T+ F D+ S  FR++ D  +ISYD FIRTT+  H    +  + K+ + GDIYK  Y 
Sbjct: 62  NKPTQQFADEISATFRNLWDEFNISYDQFIRTTDDAHKKGVQAAFLKMFENGDIYKDFYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ + ++    DG            ++EE YFFRLS Y+  LL YYE+HPE
Sbjct: 122 GNYCVSCETFFPESQLM---DGGCCPDCGRATTIVKEESYFFRLSKYEKPLLDYYEAHPE 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242
           FILP  RRNEVISFVK GL DLS++R +F WG+ +P+   +P+++MYVW+DAL NY+T  
Sbjct: 179 FILPKSRRNEVISFVKGGLNDLSVTRTSFSWGVHLPESLNEPKHVMYVWLDALMNYVTAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D SK  FWPA++ ++GKDILRFHAIYWPAFL+S  LPLPK + +HG+    GEK
Sbjct: 239 GY--GSDESKMLFWPANVQLVGKDILRFHAIYWPAFLMSLGLPLPKHIGAHGWWTRDGEK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP EV +  GV+  RYF++RE+  G+DG + +  L  R+N+DL+N +GNL+
Sbjct: 297 MSKSKGNVVDPREVSKHYGVENFRYFMMREVPFGQDGDFSQRALIDRMNSDLSNDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R + M  K Y   +   G   +     L+    +L  +   +    +HR L ++  + +
Sbjct: 357 NRIIGMSEK-YSDFVIDSGNVAQYHAKELNDAHGILDSLETYLDELQLHRYLEELWKVFT 415

Query: 423 EVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++  +   PW ++K+   D A   + +   ++ + +++L A +P     I D L    
Sbjct: 416 IGNKAIEEHAPWVKIKEGRTDEALATVALVANLLAKASVMLNAIMPATTATIADALGFEI 475

Query: 482 ENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
               +++L  ++ L   F + K   P+FPR
Sbjct: 476 TTESYRNLIANKALLATFTIKK-IPPLFPR 504


>gi|154499613|ref|ZP_02037651.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
 gi|150271691|gb|EDM98935.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
          Length = 656

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/481 (42%), Positives = 304/481 (63%), Gaps = 12/481 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K YI+T I YP+ + HIGHAY  +  DV+AR+ RL G DV+F TGTDEHGQKI  
Sbjct: 1   MSNKGKYYITTPIYYPSDKLHIGHAYCTVATDVMARYKRLTGYDVMFLTGTDEHGQKIED 60

Query: 61  AAQNAGVTTKVFVD---QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            A++AGVT K +VD   +  R   D+  +++IS D FIRTT+  H    + ++K++ ++G
Sbjct: 61  KAKDAGVTPKQYVDNIVEGERGVLDLWKLMNISNDRFIRTTDDYHEAAVQKIFKQLYEQG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           DIYKG Y G Y    E+++ + ++    DG+  +     VQ  EEE YFFRLS Y D++ 
Sbjct: 121 DIYKGTYKGKYCKPCESFWTESQL---VDGKCPDCGRE-VQDAEEEAYFFRLSKYADRIQ 176

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
              E + +F+ P  R NE+++ F+K GL+DL +SR +F WG+ +  DP +++YVWIDAL+
Sbjct: 177 DLLE-NTDFLEPRSRVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDFDPGHVVYVWIDALS 235

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY ++      KFWPAD+H +GK+I+RFH+I WPA L++ NLPLPKKVF HG++
Sbjct: 236 NYITALGYDNDKYNDYDKFWPADVHFVGKEIVRFHSIIWPAILMALNLPLPKKVFGHGWL 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV+DP  + E  GVDALR+FL+R    G DG +  + L   +N DLAN
Sbjct: 296 LLDGGKMSKSKGNVVDPYLLSERYGVDALRFFLLRTFPFGSDGNFSNEALIGTINTDLAN 355

Query: 357 GIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL+SR+VSM+ K ++ G +P        D+ ++++ S +  +    M+      AL+
Sbjct: 356 DLGNLLSRTVSMVGKYFEGGTLPAEQTADGLDDELIALASGLRDKYEAAMERFAFQDALS 415

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V  L+S  ++Y D   PW L +   N  R + V+Y  +E +R  A+LL  F+P  + +I
Sbjct: 416 EVFKLISRANKYIDETAPWVLARDEANKPRLARVMYNLLESLRISAVLLTPFMPDTSAEI 475

Query: 474 F 474
            
Sbjct: 476 L 476


>gi|227509271|ref|ZP_03939320.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191269|gb|EEI71336.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 675

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/519 (39%), Positives = 314/519 (60%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D +AR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T + +VD+ ++  +++   L+IS   FIRTT+  H      +++++ D+GDIY 
Sbjct: 63  ADKLGMTPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHERAVADIFQQLQDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L  YY+ HP+FI P  R NE+I +F+  GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    RVN DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G+IP       E+D+ +  V    +   +++M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPEFKAGVNEADKELEEVSKESIAGFKKSMDDLHFSEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L++V  LVS+ ++Y D  +PW L K + D+   ++V+      +R +A L+   +     
Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           +IF  L + DE    ++LD   L  G        PIFPR
Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPAGAKTVAKGTPIFPR 520


>gi|268679313|ref|YP_003303744.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617344|gb|ACZ11709.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 642

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/512 (40%), Positives = 311/512 (60%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  IIAD +AR++RL G +  F TGTDEHGQKI +AA++
Sbjct: 3   QKAYITTPIYYVNDVPHIGHAYTTIIADTMARYYRLKGYETFFLTGTDEHGQKIEEAAKS 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D+ S  FR + D  +ISYD FIRTT+  H    +  ++ + DKGDIYKG Y
Sbjct: 63  RGKTPQAYADEISGKFRALWDEFEISYDKFIRTTDAEHKAGVQKAFQVMFDKGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E ++ D ++    D           + ++EE YFF+LS YQ+ L+ +Y S  
Sbjct: 123 EGHYCVSCETFFTDTQL---VDEDKCPDCGKLTRLVKEESYFFKLSKYQEDLIKWYNSDE 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           + +LP  ++NEVISFVK GL+DLS++R +FDWG+K+P   +D +++MYVW+DAL NY T 
Sbjct: 180 KCVLPKGKKNEVISFVKQGLRDLSITRTSFDWGVKLPSSMNDDKHVMYVWLDALLNYTTA 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    +FWPA +H++GKDILRFHAIYWPAFL+S  L LPK V +HG+    GE
Sbjct: 240 LGY--GGDEKNMEFWPATMHLVGKDILRFHAIYWPAFLMSLGLALPKHVAAHGWWTRNGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P EV +  G++  RYF++RE+  G+DG + +  L  R+N+DL N +GNL
Sbjct: 298 KMSKSKGNVVNPKEVADAYGLENFRYFMLREVPFGQDGDFSQKALMDRINSDLGNELGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K  +G++ +    T   ES L     +L+ +  N+     +R L ++  ++
Sbjct: 358 LNRIIGMSGKYSNGVVNSKDVNT-FHESELDAVEEILKNVENNLLELQTNRYLEELWKVL 416

Query: 422 SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           S  ++     +PW ++K+   ++A  ++ +   ++ ++++LL   +PK    I   L   
Sbjct: 417 SIANQAITVHEPWVKIKEGKVEQALALVALVSNILARVSVLLHPIMPKTTTTIAKALGFE 476

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
                +  L  R  L   F + K   P+FPR 
Sbjct: 477 INTASYDKLVVRKTLLEEFTIEKV-PPLFPRI 507


>gi|228477862|ref|ZP_04062476.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250352|gb|EEK09592.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 667

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 317/523 (60%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ ++GDIY G YSG
Sbjct: 65  ITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L +++
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFF 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  +  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPAYVENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLIQPFMMTTSN 484

Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L ++     EN    +  + +     +     PIFPR 
Sbjct: 485 AIMEQLGLSGAFDLENLELSAFPENVT----VVSKGTPIFPRL 523


>gi|148992454|ref|ZP_01822149.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147928771|gb|EDK79784.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
          Length = 665

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/522 (39%), Positives = 318/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T +V+VD+ +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|322372362|ref|ZP_08046898.1| methionine--tRNA ligase [Streptococcus sp. C150]
 gi|321277404|gb|EFX54473.1| methionine--tRNA ligase [Streptococcus sp. C150]
          Length = 667

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 208/523 (39%), Positives = 320/523 (61%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +L+ISYD FIRTT+  H      +++++ ++GDIY G YSG
Sbjct: 65  ITPQAYVDGMAVGVKDLWQLLNISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+   G+         + V+ + EE YFF+LS Y D+L +++
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEQGKVIGGVAPSGHEVELVSEESYFFKLSNYADRLAAFF 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  +  G+   FW  +     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQDEHGNFDLFWQNNENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +PT     T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPTYVENVTDFDADLSKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K  +N ++ + V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDSNKEQLAAVMAHLAASLRVVAHLIQPFMMTTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L ++     F   +  L  GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLSG---TFDLENLELS-GFPENVTVVSKGTPIFPRL 523


>gi|270292555|ref|ZP_06198766.1| methionine--tRNA ligase [Streptococcus sp. M143]
 gi|270278534|gb|EFA24380.1| methionine--tRNA ligase [Streptococcus sp. M143]
          Length = 679

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/521 (39%), Positives = 315/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSISDYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 494 SRAVLAQLGLAEVSSLENLSLTDFPAGVTVVAKGTPIFPRL 534


>gi|325690672|gb|EGD32673.1| methionine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 679

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V S  + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K  +     + V+      +R +A +++ F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLAASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKSVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|149021655|ref|ZP_01835686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930116|gb|EDK81102.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 665

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/522 (39%), Positives = 318/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T +V+VD+ +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWILAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|329935921|ref|ZP_08285723.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304612|gb|EGG48488.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 547

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/507 (40%), Positives = 307/507 (60%), Gaps = 24/507 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+  GV
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+  +  +  + + LDI+ DDFIRTT+KRH D  +   + + DKG+IYKG Y G
Sbjct: 75  TPQAWADKLVTEAWEPLWEHLDIANDDFIRTTQKRHTDRVQEFVQDLHDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    E+  G +G++   +       PV+ + EE YFFRLS Y DKLL++YE
Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEFAGQKLCPIHKKPVEILSEENYFFRLSEYTDKLLAHYE 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWGI IP D ++++YVWIDAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVRQGLQDLSISRSTFDWGIPIPWDEKHVIYVWIDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +N +  +  F PAD+H++GKDILRFHA+ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYNENQEKFEETF-PADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKVAANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K +DG +P   A  E++ ++ +  ++ + E    +  +L     +  V   
Sbjct: 373 ASRVAAMVGKYFDGELPASTADGEAEAAVRAGLAKAVAEADRRIGEELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKKT-------------NPDRASTVLYVTVEVIRQLAILLQAFVP 467
           V +V+ Y   Q+PW++ KT                R +T+LY   E +R +A+LL   +P
Sbjct: 433 VKQVNGYLTEQEPWKVAKTAFSDAAGAAGSEEGRARLATILYTAAEALRAVAVLLNPVMP 492

Query: 468 KLANKIFDILFVADENRCFQSLDQRLK 494
           + + K+++ L    E       DQR++
Sbjct: 493 ETSQKLWESL--GAEPSLGALADQRVQ 517


>gi|325687041|gb|EGD29064.1| methionine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 679

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 318/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D ++  V ++ + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQIPAYEEDVTDFDGALAQVAAQSIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V  L+S  ++Y D   PW L K     ++ ++V+      +R +A +++ F+ + 
Sbjct: 435 RALEAVWMLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|170016653|ref|YP_001727572.1| methionyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803510|gb|ACA82128.1| Methionyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 705

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/523 (40%), Positives = 318/523 (60%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G  V F TGTDEHG KI +
Sbjct: 33  VQKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEQVHFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG +   ++D  ++  +D+  ++DISYDDFIRTTE+RH    + ++  + +KGDIY
Sbjct: 93  KAEAAGTSEIAYLDGMAKQIKDLWQLMDISYDDFIRTTEERHEKAVQKIFNTLFEKGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY    G+    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYHDDAGKMIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+ F+  GL+DL+++R   DWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +      KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALSNYITALGYDSDNTDLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G+++ K  K+SKS GNVI P EV+E   G+DA+RY+L+R +  G DG +  +    RVN 
Sbjct: 333 GWLVMKDGKMSKSKGNVIYP-EVLEARYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNF 391

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G++P      T+ DE ++      + +     Q+    
Sbjct: 392 DLANDLGNLLNRTVAMINKYEHGVVPELHTGKTDFDEDLVRTVEDAIADYNRYFQDMRTA 451

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            AL  V +++   ++Y D  +PW L K +  +   S V+      +R +A+LLQ  + + 
Sbjct: 452 DALESVWTIIRRANKYIDETQPWVLAKDDTQKVVLSNVMAHLAAALRVVAVLLQPVLTQA 511

Query: 470 ANKIFDIL-FVADEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
             KI++ L F   EN  R       +L  G  + K  +PIFPR
Sbjct: 512 PKKIYEQLGFTYPENGVRIAGLTFGKLPTGGTVVKKGEPIFPR 554


>gi|218248716|ref|YP_002374087.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257061779|ref|YP_003139667.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218169194|gb|ACK67931.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591945|gb|ACV02832.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 535

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 292/478 (61%), Gaps = 9/478 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  ++T + Y N  PHIG AY  +IADV+ARF RL G  VL  TGTDEHGQKI + A+  
Sbjct: 10  KFALTTPLYYVNDVPHIGSAYTTMIADVIARFKRLQGSSVLLITGTDEHGQKIERTAEAK 69

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +   D+   +F  +   L+I YD F RTT K H    +  ++++ ++GDIY     
Sbjct: 70  GLEPQEHCDRIVESFESLWQKLNIQYDRFSRTTAKNHGAIVKEFFQRVWEQGDIYLAQQQ 129

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E +    E+ +  DG      +   +W +EE YFFRLS YQ+KL + Y+ HPE
Sbjct: 130 GWYCVPCEEFKEKRELLE--DGCCPLHPNKKAEWRDEENYFFRLSNYQEKLETLYQEHPE 187

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFV  GL+D S+SR    WG  +P D  + +YVW DAL  Y+T     
Sbjct: 188 FIEPESRRNEVISFVSGGLQDFSISRVNVAWGFPVPGDDNHTIYVWFDALLGYITALLEP 247

Query: 246 DNPDG---SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           D   G   + +++WP +LH+IGKDILRFHA+YWPA L+SA LPLPK++FSHGF+   G+K
Sbjct: 248 DQEAGLENALSQWWPINLHLIGKDILRFHAVYWPAMLMSAKLPLPKQIFSHGFLTKDGQK 307

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN ++P +++E  G DA+RY+ ++EI CG+DG +++      +NADLAN +GNL+
Sbjct: 308 MSKSLGNTVNPFDLVERYGSDAVRYYFLKEIDCGRDGDFNETRFVNVLNADLANDLGNLL 367

Query: 363 SRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +R++ MI K   G+IP P    E   + S+ S+   +   + +  +    ++A  ++++L
Sbjct: 368 NRTLGMIKKYCQGVIP-PLIIEELALEHSLKSIGLELGDRVTQAYETLRFNQACEEILTL 426

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   +++ D Q PW L K+       ++L   +E +R  A LL   +P L+NK++  L
Sbjct: 427 IRASNKFIDEQAPWRLFKQGQQKEVESILAAVLESVRLSAYLLSPIIPNLSNKVYQQL 484


>gi|331002319|ref|ZP_08325837.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410135|gb|EGG89569.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 654

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/478 (42%), Positives = 302/478 (63%), Gaps = 14/478 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +ARF R +G +V F TGTDEHGQKI   A+ AG+
Sbjct: 7   YITTAIAYASGKPHIGNTYEIVLADAIARFRREEGHEVFFQTGTDEHGQKIENKAKEAGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD  +   R + D+++ SYD FIRTT+  H    + ++KK  D+GDIYKG Y G 
Sbjct: 67  TPKEYVDNAAGQIRKIWDMMNTSYDKFIRTTDDDHKKQVQKIFKKFYDQGDIYKGFYEGM 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ D ++    DG+  +  H  V   +E+ YFF++S Y D+L+ +   HPEFI
Sbjct: 127 YCTACESFFTDSQL---VDGKCPDC-HGDVYPAKEDAYFFKMSKYADRLIKHINEHPEFI 182

Query: 188 LPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P+ R+NE++ +F+  GL+DL +SR +F WGI +  DP+++ YVW+DAL+NY+T  GY  
Sbjct: 183 QPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVTYVWLDALSNYITGIGYDV 242

Query: 247 NPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + + S+   K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L    K+S
Sbjct: 243 DGESSERFKKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGDGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+    +++  GVDA+RYF++ E+    DG    D + +R N+DLAN +GNLVSR
Sbjct: 303 KSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWDLMVERFNSDLANVLGNLVSR 362

Query: 365 SVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           ++SM  K +DG++      +    TE D  +  V    +++  + M    +  A+ ++ +
Sbjct: 363 TISMSNKYFDGVLTDTKDESVAGATEIDTDLKDVVLMSVEKAVKKMSELRVADAITEIWT 422

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           L    ++Y D   PW L K      R  TVLY   E I   A LL +F+P+ + KI +
Sbjct: 423 LFKRCNKYIDETTPWILAKEEDKKSRLQTVLYNLAESIAIGASLLYSFMPETSGKILE 480


>gi|227512284|ref|ZP_03942333.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227084459|gb|EEI19771.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 675

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/519 (39%), Positives = 313/519 (60%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D +AR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + +VD+ ++  +++   L+IS   FIRTT+  H      +++++ D+GDIY 
Sbjct: 63  ADKLGMAPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L  YY+ HP+FI P  R NE+I +F+  GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    RVN DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G+IP       E+D+ +  V    +   +++M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPGFKAGVNEADKELEEVSKESIASFKKSMDDLHFSEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L++V  LVS+ ++Y D  +PW L K + D+   ++V+      +R +A L+   +     
Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           +IF  L + DE    ++LD   L  G        PIFPR
Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPTGAKTVAKGTPIFPR 520


>gi|317473421|ref|ZP_07932715.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899071|gb|EFV21091.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 655

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/491 (41%), Positives = 311/491 (63%), Gaps = 11/491 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A 
Sbjct: 10  KEPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAA 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG 
Sbjct: 70  EQGVTPKEFVDDVAGEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYEQGDIYKGH 129

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +     VQ  +EE YF +LS Y D+L+ Y  +H
Sbjct: 130 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFLKLSKYADRLIEYINTH 185

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+++ F+  GL+DL +SR +F WGI +  D  +++YVW+DALTNY+T  
Sbjct: 186 PEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITGI 245

Query: 243 GYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + D +    K WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L   
Sbjct: 246 GYDCDGDSTDQFNKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQGD 305

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+   ++     VDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 306 GKMSKSKGNVLYADDLAGMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTLGN 365

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K +DG++   GA  E D+ + +V +   +++++ M    +  A+ ++ ++
Sbjct: 366 LVNRTISMSNKYFDGIVEDKGAEDEFDDQLKAVVTGAREKVQKKMDVLRVADAMTEIFNV 425

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K +   DR +TVLY  VE I   A LL+ ++P+ + KI   L 
Sbjct: 426 FKRCNKYIDETMPWVLAKDDAKKDRLATVLYNLVEGILTGAALLEPYMPETSAKILKQLN 485

Query: 479 VADENRCFQSL 489
              E R F+ L
Sbjct: 486 A--EPRSFEDL 494


>gi|28377354|ref|NP_784246.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254555549|ref|YP_003061966.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|308179569|ref|YP_003923697.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258344|sp|Q88Z97|SYM_LACPL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28270186|emb|CAD63085.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044476|gb|ACT61269.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|308045060|gb|ADN97603.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 683

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/516 (40%), Positives = 309/516 (59%), Gaps = 14/516 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+ + HIG++Y  I  D LAR+ R  G DV F TGTDEHG KI + A+    
Sbjct: 9   YITTPIYYPSGKLHIGNSYTTIACDTLARYKRAMGYDVYFLTGTDEHGLKIEEKAEKLNT 68

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K +VD  ++  +D+  +L+IS D FIRTT+  H    + ++ ++   GDIY G Y GW
Sbjct: 69  DPKSYVDGMAKQIKDLWQLLEISNDKFIRTTDDYHERAVQEIFDRLLKNGDIYLGEYEGW 128

Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           YS+ DE Y+ +    EV++  +G+    +    + V+ ++E+ YFF++S Y D LL YY+
Sbjct: 129 YSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMSKYADWLLDYYQ 188

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           SHP+FI P  R  E+I+ F+K GL+DL++SR +F WG+ +  DP++++YVWIDALTNY+T
Sbjct: 189 SHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVYVWIDALTNYIT 248

Query: 241 TTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             GY   + +    KFWPAD+ ++GK+I+RFH IYWP  L +  LPLPKKVF HG++L K
Sbjct: 249 ALGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKKVFGHGWLLMK 308

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI P  ++E  G+DALRY+LV+ +  G DG +  +    RVN DLAN +G
Sbjct: 309 DGKMSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYDLANDLG 368

Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+++MI K  DG +P      TE D  + +  +  ++     M +  +  ALA+V 
Sbjct: 369 NLLNRTIAMINKYEDGQLPAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSDALAEVW 428

Query: 419 SLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            LVS  ++Y D   PW+L K+    + D+ ++V+      +R +A L+   +     +IF
Sbjct: 429 KLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTHAPKEIF 488

Query: 475 DILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
             L +         L    L  G  +     PIFPR
Sbjct: 489 TQLGLDPATLAIADLQLADLPAGAQVVAKGTPIFPR 524


>gi|154482623|ref|ZP_02025071.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC
           27560]
 gi|149736523|gb|EDM52409.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC
           27560]
          Length = 648

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/472 (43%), Positives = 299/472 (63%), Gaps = 9/472 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAY + +PHIG+ YE I+AD + RF R  G DV F TGTDEHGQKI   A  AG+
Sbjct: 6   YLTTAIAYTSGKPHIGNTYEAILADSIVRFKRQQGYDVRFQTGTDEHGQKIELKAAEAGI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K FVD  S   +++ D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG Y G 
Sbjct: 66  TPKEFVDNVSGVIKEIWDLMNTSYDKFIRTTDPDHEKQVQKIFKKLYDQGDIYKGHYEGM 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     V   +EE YFFR+S Y D+L+ +  +HPEFI
Sbjct: 126 YCTPCESFFTESQL---VDGKCPDCGRE-VTPAKEEAYFFRMSKYADRLIEHINTHPEFI 181

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245
            P  R+NE+++ F+  GL+DL +SR +F WGI +  DP++++YVWIDAL+NY+T  GY +
Sbjct: 182 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWIDALSNYITGLGYDV 241

Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D N D    K+WPADLH+IGKDILRFH IYWP  L++ ++PLPK++F H ++L    K+S
Sbjct: 242 DGNNDPLYDKYWPADLHLIGKDILRFHTIYWPIMLMALDVPLPKQIFGHPWLLQGDGKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI   ++    GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNLV+R
Sbjct: 302 KSKGNVIYADDLANLFGVDAVRYFVLHEMPFENDGTITWELMVERMNSDLANTLGNLVNR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM  K +DG++   G   E D+    V      +  E M    +  A+ ++ +L    
Sbjct: 362 TISMSNKYFDGVVSNKGVDEEVDDDFKKVILDTPVKAAEKMDKLRVADAITEIFTLFKRC 421

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++Y D   PW L K     DR +TVLY  +E I   A LL+ F+P+ + KI 
Sbjct: 422 NKYIDETMPWALAKEEDKQDRLATVLYNLIEGITIGASLLEPFMPETSKKIL 473


>gi|21222203|ref|NP_627982.1| methionyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256786707|ref|ZP_05525138.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770602|ref|ZP_06529980.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|25009395|sp|Q9F2I9|SYM_STRCO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10432496|emb|CAC10330.1| putative methionyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289700801|gb|EFD68230.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 538

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/481 (41%), Positives = 304/481 (63%), Gaps = 13/481 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+  GV
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+  + +++ + + LDI+ DDFIRTT+KRH D  +   + + DKG+IYKG Y G
Sbjct: 75  TPQAWADKLVTESWKPLWEHLDIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    E+  G +G+Y   +       PV+ + EE YFF+LS Y +KLL++YE
Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEYAGQKLCPIHKKPVEILSEENYFFKLSEYSEKLLAHYE 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P F+ P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPGFVQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +NP+  ++ F PAD+H++GKDILRFHAI WPA L++  LPLP K+ ++G+++  GE
Sbjct: 254 VGYNENPEKFESTF-PADVHLVGKDILRFHAIIWPAMLMAQGLPLPGKIAANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  +++++I    ++ + E    +  +L     +  V   
Sbjct: 373 ASRVAAMVGKYFGGELPAATADGDAEQAIHDGLTKAVAEADRKIGEELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKKTN-PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K + P+   R +T+LY   E +R +A+LL   +P  + K++D 
Sbjct: 433 VKQVNGYITEQEPWKVAKDDSPEGKARLATILYTAAEALRAVAVLLNPIMPDTSQKLWDS 492

Query: 477 L 477
           L
Sbjct: 493 L 493


>gi|327462090|gb|EGF08419.1| methionine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 665

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD      +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSM+ K +DG IP      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMVNKYFDGQIPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K  +     + V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLAASLRVVAHMIKPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKSVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|300767096|ref|ZP_07077009.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300495634|gb|EFK30789.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 689

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/516 (40%), Positives = 309/516 (59%), Gaps = 14/516 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I YP+ + HIG++Y  I  D LAR+ R  G DV F TGTDEHG KI + A+    
Sbjct: 15  YITTPIYYPSGKLHIGNSYTTIACDTLARYKRAMGYDVYFLTGTDEHGLKIEEKAEKLNT 74

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K +VD  ++  +D+  +L+IS D FIRTT+  H    + ++ ++   GDIY G Y GW
Sbjct: 75  DPKSYVDGMAKQIKDLWQLLEISNDKFIRTTDDYHERAVQEIFDRLLKNGDIYLGEYEGW 134

Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           YS+ DE Y+ +    EV++  +G+    +    + V+ ++E+ YFF++S Y D LL YY+
Sbjct: 135 YSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMSKYADWLLDYYQ 194

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           SHP+FI P  R  E+I+ F+K GL+DL++SR +F WG+ +  DP++++YVWIDALTNY+T
Sbjct: 195 SHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVYVWIDALTNYIT 254

Query: 241 TTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             GY   + +    KFWPAD+ ++GK+I+RFH IYWP  L +  LPLPKKVF HG++L K
Sbjct: 255 ALGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKKVFGHGWLLMK 314

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI P  ++E  G+DALRY+LV+ +  G DG +  +    RVN DLAN +G
Sbjct: 315 DGKMSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYDLANDLG 374

Query: 360 NLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+++MI K  DG +P      TE D  + +  +  ++     M +  +  ALA+V 
Sbjct: 375 NLLNRTIAMINKYEDGQLPAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSDALAEVW 434

Query: 419 SLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            LVS  ++Y D   PW+L K+    + D+ ++V+      +R +A L+   +     +IF
Sbjct: 435 KLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTHAPKEIF 494

Query: 475 DILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
             L +         L    L  G  +     PIFPR
Sbjct: 495 TQLGLDPATLAIADLQLADLPAGAQVVAKGTPIFPR 530


>gi|227522370|ref|ZP_03952419.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227090428|gb|EEI25740.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 675

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/519 (39%), Positives = 313/519 (60%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D +AR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + +VD+ ++  +++   L+IS   FIRTT+  H      +++++ D+GDIY 
Sbjct: 63  ADKLGMAPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L  YY+ HP+FI P  R NE+I +F+  GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    RVN DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G+IP       E+D+ +  V    +   +++M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPGFKAGVNEADKELEEVSKESIVSFKKSMDDLHFSEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L++V  LVS+ ++Y D  +PW L K + D+   ++V+      +R +A L+   +     
Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           +IF  L + DE    ++LD   L  G        PIFPR
Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPTGAKTVAKGTPIFPR 520


>gi|302328190|gb|ADL27391.1| methionine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 693

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/472 (38%), Positives = 296/472 (62%), Gaps = 8/472 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  Y++T I Y N  PHIGH+Y  ++AD+L RFH++ G    F TGTDEHGQK+ +
Sbjct: 1   MCDMKNFYVTTPIYYVNDAPHIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKVQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA    VT +  VD+    F D+   ++I  D FIRTT   H    +   +K+ DKG+IY
Sbjct: 61  AAAKRNVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWYS+ +E ++++DE+    + +     H PV+W++E+ YFF++SAYQ KL+ Y 
Sbjct: 121 SKEYEGWYSVGEERFFSEDEL---DENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYL 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
           ESH ++I+P  R NE+  F++  L DL +SR      WGI +P DP Y+ YVW DAL NY
Sbjct: 178 ESHKDWIVPDYRWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVWFDALLNY 237

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FIL 297
           ++ +             WPA  H+IGKDIL  H++YWP  L++ ++PLP+ + +HG +++
Sbjct: 238 VSASTAFHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLV 297

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           + GEK+SKS GNV++P++ +E+ G+DA RYFL RE+  G+D  +  +G  +R+N+DLAN 
Sbjct: 298 NGGEKMSKSAGNVVNPMDYMEKYGIDAFRYFLAREMVVGQDANFTHEGFVRRINSDLAND 357

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GN+++R   ++L ++ G++P P A  ++   ++++ +RV   + E +    + + + ++
Sbjct: 358 LGNVLNRVHRLVLTNFGGVLPAPNALDDAANEVITIANRVRTNVMEWVPQVKLSQVVEEI 417

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           ++LV  ++RY + + PW+L K  +  D  +TVLY++ E +R    +L   +P
Sbjct: 418 MTLVRSINRYLEIKAPWKLAKDESKKDELATVLYISAEAVRLSLSMLWPVIP 469


>gi|308234123|ref|ZP_07664860.1| methionyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943653|ref|ZP_08241118.1| methionine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491622|gb|EGF23396.1| methionine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 542

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 300/486 (61%), Gaps = 20/486 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I+T I Y NA PH+G AY  I+ADV AR+ R+ G +V F TG DEHGQK+A+AA    +
Sbjct: 10  FITTPIYYVNAAPHLGTAYCTILADVQARYRRMMGYNVKFLTGMDEHGQKVAEAAAAHNL 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + + + D  +  F ++   L+ISYDDFIRTTE R +   + LW ++ + G +YKG Y GW
Sbjct: 70  SPQAWCDSQAPLFTNLWKKLEISYDDFIRTTEPRQYKAVQELWNRMKETGYLYKGSYDGW 129

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           Y   +E Y+ + +V K A+ Q    ++       P+Q ++EE YFF+LSA+QDKLL+ Y+
Sbjct: 130 YCTPEETYFTETQVSKAAEAQQSEGENLCPDCGRPLQRVKEESYFFKLSAFQDKLLALYD 189

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEF+ P  R NEV SFV SGL+DLS+SR +FDWGI +P D +++ YVW DAL NY+T+
Sbjct: 190 EHPEFVQPAFRMNEVRSFVASGLQDLSVSRTSFDWGIPVPFDIKHVTYVWFDALLNYMTS 249

Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             Y  +   SK +F   WPA  HV+GKDI+RFH + WPA L++    LP+ VF+HGF+  
Sbjct: 250 VRYGLDDAASKDEFAFRWPAQCHVVGKDIIRFHCVIWPAMLMALGEALPQSVFAHGFLTV 309

Query: 299 K------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           +       EK+SKS GN I P EVI+++GV+  RY+ + ++  G+D     + +++  NA
Sbjct: 310 RNPQTGNAEKMSKSRGNAIAPAEVIDKLGVEGYRYYFMTDVTHGEDSAISFERMEQVYNA 369

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN  GNLVSR+++M  K +DG  P     + +    +  +  R+ +  ++NM++    
Sbjct: 370 DLANSWGNLVSRTITMCDKYFDGKTPVVDDTWKQQTSPLRDIAQRMFEPYQKNMESMNFA 429

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV---TVEVIRQLAILLQAFVPK 468
            A   V+ LV   + Y +   PW + K +P RA  + ++    +E IR  A LL  F+P+
Sbjct: 430 AAKDVVMELVHAANHYIEDMAPWNVAK-DPTRAEELRFILLNLLESIRIAAHLLAPFMPE 488

Query: 469 LANKIF 474
            ++++ 
Sbjct: 489 TSHEVL 494


>gi|303261460|ref|ZP_07347408.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303266261|ref|ZP_07352152.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268700|ref|ZP_07354490.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301801632|emb|CBW34330.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302637594|gb|EFL68081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302641760|gb|EFL72117.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644191|gb|EFL74447.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
          Length = 665

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + DE    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|182683707|ref|YP_001835454.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
 gi|182629041|gb|ACB89989.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
          Length = 679

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + DE    ++L     P    +     PIFPR 
Sbjct: 494 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|162448397|ref|YP_001610764.1| hypothetical protein sce0127 [Sorangium cellulosum 'So ce 56']
 gi|161158979|emb|CAN90284.1| metG1 [Sorangium cellulosum 'So ce 56']
          Length = 696

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/535 (39%), Positives = 301/535 (56%), Gaps = 43/535 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PH+G AY  I ADVL R+HRL G +    TGTDEHG KI +AA+  
Sbjct: 4   RFYVTTPIYYINDVPHLGTAYTTIAADVLCRYHRLRGHESRMLTGTDEHGLKIQRAAEAR 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV      D+ +  FR     L  + DDFIRT+E RH    + LW +I  +GDIY G Y 
Sbjct: 64  GVAPGAHADEIAAVFRATWPKLGCAPDDFIRTSEPRHKKAVQELWSRIKARGDIYLGHYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  EAYY + ++ +   G        P + ++EE YFFRLS Y D LL YY+ +P 
Sbjct: 124 GLYCVGCEAYYTEKDLEQ--PGNVCPLHKKPAESVKEESYFFRLSRYGDALLDYYKRNPT 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  R NEV+SFV+ GL+DLS+SR TF+WGI +PDDP+++MYVW DAL NY+T    L
Sbjct: 182 FVQPASRLNEVVSFVREGLQDLSVSRTTFEWGIPVPDDPKHVMYVWFDALANYMTA---L 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN---LPLPKKVFSHGFILHKGEK 302
             P+    +FWPAD+H++GKDILRFHA+YWPAFLLSA      LP++VF+HGF+ + G+K
Sbjct: 239 REPE-DNTRFWPADVHLVGKDILRFHAVYWPAFLLSAGYGEAELPRQVFAHGFLTYSGQK 297

Query: 303 ISKSLGNVIDPIEV---------------------IEEVGVDALRYFLVREIACGKDGFY 341
           +SK+L N I P+EV                        VGVD +RY L+R I+ G+DG +
Sbjct: 298 MSKTLRNTISPVEVATALSEAAAAALPGGPGAAAGAPLVGVDVVRYCLMRAISFGQDGDF 357

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +  R  ++L N +GNL++R +      +   +P  GA    +E +     +     
Sbjct: 358 SLQDVLSRYGSELGNALGNLLNRVLP-----FAEEVPAKGALGPLEEELAGAQRQAAAAA 412

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
                     RAL  + ++++  + Y D   PW  KKT+P R  T++   +E +  ++++
Sbjct: 413 ATAFDANQPTRALDAIWTVIAAANLYIDKAAPWVAKKTDPARLGTIIATLIEQLEAISVM 472

Query: 462 LQAFVPKLANKIFD------ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +P +A ++ +      I F    +R   +L  R  PG  LH+   PIFPR 
Sbjct: 473 ISPVMPVVAGRMREQLGLPPIAFEEGSDRWPMALPSR-APGEKLHRG-SPIFPRL 525


>gi|328946604|gb|EGG40742.1| methionine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 665

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ +G++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEESGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V S  + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+   V  +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLVASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SQAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|325696277|gb|EGD38168.1| methionine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 679

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++ ++L+ISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWNLLNISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D  +  V S  + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGPLAQVASESIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K  T     + V+      +R +A ++  F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 535


>gi|119512207|ref|ZP_01631297.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
 gi|119463173|gb|EAW44120.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
          Length = 533

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 297/480 (61%), Gaps = 11/480 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++  ++T + Y N  PH+G AY  I ADV+ARFHRL G +VL  TGTDEHGQKI ++
Sbjct: 6   KTEKRFALTTPLYYVNDVPHVGSAYTTIAADVVARFHRLLGHEVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F DQ   +F  +  +L+I YD F RTT  RH    +  + ++ +KGDIY+
Sbjct: 66  AESLGKPPQEFCDQIVPSFIKLWQLLNIQYDRFSRTTASRHEAIVKEFFMRVWEKGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + ++ +G     +  +   V+W +E+ YFF LS YQ +L  +Y+
Sbjct: 126 GKQKGWYCVSCEEFKEERDLLEGKRCPIHTNKE--VEWRDEQNYFFSLSKYQTQLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P+FI P  RRNEV+SFV  GL+D S+SR   DWG ++P D Q+ +YVW DAL  Y+T 
Sbjct: 184 SRPDFIQPESRRNEVLSFVSQGLQDFSISRVNLDWGFRVPVDSQHTLYVWFDALLAYVTA 243

Query: 242 TGYLD-NPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D  P  + A   +WP +LH+IGKDILRFHA+YWPA L+SA LPLP +VF HGF+  
Sbjct: 244 LLEADAEPTLANALETWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPDQVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DPI ++E  G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTLDPIGLVESYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLANDL 363

Query: 359 GNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVL-QEIRENMQNQLIHRALA 415
           GNL++R+++M+ K    DG+  T G    +DE+ L      L ++++++ Q    ++A  
Sbjct: 364 GNLLNRTLNMVKKYCSNDGL--TIGNEAINDENPLKAIGLGLGEQVKQSYQALAFNQACE 421

Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             + LV   +++ D Q PW L K+       TVLY  +E +R  A LL   +P ++N I+
Sbjct: 422 ATLLLVRTCNKFIDEQAPWSLYKQGKQQEVETVLYAVLESVRLAAYLLSPVIPNISNAIY 481


>gi|303255799|ref|ZP_07341840.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260254|ref|ZP_07346225.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303264128|ref|ZP_07350049.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|302597183|gb|EFL64288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302638578|gb|EFL69042.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302646533|gb|EFL76759.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 665

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + DE    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|324994961|gb|EGC26874.1| methionine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327462997|gb|EGF09318.1| methionine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 665

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K ++G +P      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFNGQVPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K  T     + V+      +R +A ++  F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 521


>gi|227528869|ref|ZP_03958918.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227351192|gb|EEJ41483.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 675

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/521 (39%), Positives = 313/521 (60%), Gaps = 13/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG+ Y  +  D  AR+ RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNTYTTVACDAEARYKRLMGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G   + +VD+ +   + +   ++I+ D FIRTT+  H    + +++K  D+GDIYK
Sbjct: 63  AEKLGKQPQEYVDEMAAGIKKLWKTMEITNDKFIRTTDDYHEKAVQKIFQKFVDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+  +G     +    + VQ +EEE YFF++S Y D 
Sbjct: 123 GKYKGWYSVDDEEYFTESQLAEVYRDDNGNVIGGKAPSGHEVQLVEEESYFFKMSKYSDW 182

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+++ F+K GL+DL+++R +F+WG+K+P+DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPHTRVNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  K  K+SKS GNVI P  ++   G+DA RY+L++ +  G DG +  +    +VN DL
Sbjct: 303 WLTMKDGKMSKSKGNVIYPETLVNRYGLDATRYYLLKAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  DG ++    A TE D  +    +  + E +  M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQDGKLVAQNDATTEYDTDLEQTAANAIAEFKAEMDRVHFADA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ V  LVS  ++Y D  +PW L K    +A  S V+    + +R +A L+Q  +     
Sbjct: 423 LSAVWKLVSRANKYIDETEPWVLAKDESKKAELSDVMTHLAKSLRVIAALIQPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +I   L +   N    +L  D   +   ++ K   PIFPR 
Sbjct: 483 EIITQLGLEGTNLDLTTLQFDDFPETAQVVAKG-TPIFPRL 522


>gi|257460335|ref|ZP_05625436.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441666|gb|EEV16808.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 665

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/514 (41%), Positives = 314/514 (61%), Gaps = 23/514 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI T I Y N  PHIGHAY  IIAD +ARF+RL G +V F TGTDEHGQKI +AA   
Sbjct: 2   KKYIMTPIYYVNDVPHIGHAYTTIIADTMARFYRLQGHEVFFKTGTDEHGQKIEEAAAKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + K + D  S  F+D+ D  DISYD F RTT+  H    + +++K+ +KGDIYKG Y 
Sbjct: 62  AQSPKQYADGVSAKFKDLWDEFDISYDMFSRTTDAAHEAAVQNVFRKMYEKGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++    DG+Y        + ++EE YFFRLSAY ++LL +YE   +
Sbjct: 122 GNYCVSCESFFPSAQLI---DGEYCPDCGKKTKILKEESYFFRLSAYAERLLKWYEDE-K 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP+ ++NEVISFVKSGLKDLS++R  FDWG+KIP   +DP++++YVW+DAL +YL++ 
Sbjct: 178 CILPLGKKNEVISFVKSGLKDLSITRTGFDWGVKIPPELNDPKHVIYVWLDALMDYLSSL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+     G + ++W   LH++GKDILRFHA+YWPAFL+S  L +P+ + +HG+    G+K
Sbjct: 238 GFCAG--GERMEYWSDALHIVGKDILRFHAVYWPAFLMSLGLNMPRSIAAHGWWTRDGKK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP EV    G++  RYFL+RE+  G+DG + +  +  RVN++LAN +GNL+
Sbjct: 296 MSKSLGNVVDPREVANAYGLEQFRYFLLREVPFGQDGDFSQKAIINRVNSELANELGNLL 355

Query: 363 SRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           SR V M  K  D +I +        A  +   S LS     L+E+  N   + + RALA 
Sbjct: 356 SRIVGMSAKYSDYVINSKDVMKFFTAEIKEANSYLSAAISALEEVATNRYLEELWRALAL 415

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + +++ +       PW L K     +A  ++ +   ++ ++A+LL   +PK A +I D
Sbjct: 416 ANASIAKYE-------PWNLIKNGEQAKALALVALVANILAKVAVLLSPAMPKTAARIAD 468

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            L        ++ L  R +      K  +P+F +
Sbjct: 469 TLGFEISTPLYEKLVLRGEILDFKAKPCEPLFTK 502


>gi|317490262|ref|ZP_07948750.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910756|gb|EFV32377.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 529

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 283/480 (58%), Gaps = 7/480 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
            +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A + G+T
Sbjct: 8   FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     FRD  D+L I+Y DF+RTTE RH  T +  W+ + D+G  YKG Y GWY
Sbjct: 68  PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHARTVQKFWQDLYDRGWCYKGSYEGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186
            + +E YY + ++ K  DG+        PVQ    EE +FF+LS + DKLL++YE +P+F
Sbjct: 128 CVHEETYYAESDLEKNEDGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT  GY D
Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247

Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L KGEK+S
Sbjct: 248 EGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLTKGEKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN + P ++ +  GVDA RY+ + ++  G DG    + + +  NADLAN  GNL SR
Sbjct: 308 KSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367

Query: 365 SVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +M  K +DG +P  P     ++  + ++   +  E    +       A A V  L   
Sbjct: 368 VFNMTKKYFDGQVPEVPAEVLANENPLRAITEELYAEYDAALGAVDFTAAAAAVQKLAGR 427

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           V+ Y +   PW L K+       + V+Y  +E IR +A+ +  F+P  + ++F  L + D
Sbjct: 428 VNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFRRLSLGD 487


>gi|221195624|ref|ZP_03568678.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184390|gb|EEE16783.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 537

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/531 (38%), Positives = 316/531 (59%), Gaps = 26/531 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  +I+T I Y NA+PH+G AY  ++ DV ARF R  G DVLF TG DEHG+K+A+AA 
Sbjct: 5   KQPYFITTPIYYVNAKPHLGTAYCSLLCDVQARFRRAAGYDVLFLTGMDEHGEKVAQAAA 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + + D  +  F+D+ D L++SYDDFIRTTE R +   + LW+++ D G IYKG 
Sbjct: 65  EHGMEPQAWCDSQAPYFKDLWDELEVSYDDFIRTTEPRQYRAVQYLWERMRDSGYIYKGS 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWY + +E Y+ + +V K  + Q    Q      H P++ + EE +FF+LS +QD+LL
Sbjct: 125 YDGWYCVHEETYFTETQVEKADEEQGTKGQHLCPDCHRPLERVTEESWFFKLSEFQDRLL 184

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
             YE HPEF+ P  R NEV SFV+SGL+D+S+SR +FDWGI +P D  ++ YVW DAL N
Sbjct: 185 KLYEEHPEFVEPDFRLNEVRSFVESGLQDVSVSRTSFDWGIPVPFDEGHVTYVWFDALLN 244

Query: 238 YLTTTGYLDN-PDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           Y T  GY D+ P+ +  +A+FWPA +HV+GKDI+RFH + WPA L++    +P++VF+HG
Sbjct: 245 YYTAVGYGDDSPEAAALRARFWPAQMHVVGKDIIRFHCVIWPAMLMALGESVPERVFAHG 304

Query: 295 FILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           F+  +       EK+SKS GN I P +V++ +GV+  RY+ + ++  G+D     + +++
Sbjct: 305 FLNVRNSETGAIEKMSKSRGNAIAPEDVVKLLGVEGYRYYFMTDVVPGEDSGISFERMEQ 364

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQN 407
             NADLAN  GNLVSRS++M  K + G  P   GA       + ++   +       M +
Sbjct: 365 VYNADLANSWGNLVSRSLNMSDKYFAGCTPHVDGALISDKNPLKALADGIYGRYATCMDH 424

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQA 464
                A   V+ LV   + Y +   PW + K +P R S    ++Y  +E IR  A LL  
Sbjct: 425 MNYVGAKDVVMELVHAANHYIEESAPWNVAK-DPARVSELAEIIYSLLEAIRISAHLLMP 483

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510
           F+P  + ++   + + ++     +L++     +L  G  + K  + +FPR 
Sbjct: 484 FMPTTSAEVLSRMSLGEDEITSCALEKDCTWGKLSGGLAVTKG-EALFPRL 533


>gi|312864247|ref|ZP_07724481.1| methionine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100248|gb|EFQ58457.1| methionine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 667

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/523 (39%), Positives = 315/523 (60%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ ++GDIY G YSG
Sbjct: 65  ITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+   G          + V+ + EE YFF+LS Y D+L +++
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEQGNVIGGIAPSGHEVELVSEESYFFKLSNYADRLTAFF 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  +  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMMTTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L +         L+     GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVVSKGTPIFPRL 523


>gi|327490158|gb|EGF21946.1| methionine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 665

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   + +  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDSMAVGVKKLWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K ++G +P      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFNGQVPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K  T     + V+      +R +A ++  F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 521


>gi|229816447|ref|ZP_04446748.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
 gi|229807989|gb|EEP43790.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
          Length = 548

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/490 (40%), Positives = 296/490 (60%), Gaps = 21/490 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I Y NA PH+G AY  IIADV AR+ R  G +V F TG DEHGQK+A+
Sbjct: 16  MSSKPSYYITTPIYYVNADPHLGTAYSTIIADVQARYRRAAGYNVKFLTGMDEHGQKVAE 75

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T + + D  + +F ++ + L+IS DDFIRTTE R     + LW+++ + G IY
Sbjct: 76  AAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIY 135

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWY + DE ++ + +V K  + +    +H       P++ ++EE +FF+LSA+QD
Sbjct: 136 KGSYDGWYCVPDETFFTETQVDKADEARGTKGEHLCPDCDRPLERVKEESWFFKLSAFQD 195

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           KLL+ Y+ HP+F+ P  R NEV SFV+ GL DLS+SR +FDWGI++P D +++ YVW DA
Sbjct: 196 KLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIEVPFDDEHVTYVWFDA 255

Query: 235 LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           L NY+T  GY    D + A F   WPA  H++GKDI+RFH + WPA L++    LP+ VF
Sbjct: 256 LINYMTAVGYGAEGDEAAADFAYRWPAQTHIVGKDIIRFHCVIWPAMLMALGEALPEHVF 315

Query: 292 SHGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           +HGF+        K EK+SKS GN I P EVIE++GV+  RY+ + ++  G DG      
Sbjct: 316 AHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMTDVTPGTDGAISFGR 375

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRE 403
           +++  NADLAN  GNL+SRS +M +K ++G  P   A     ++  + S    + +    
Sbjct: 376 MEQVYNADLANSWGNLISRSTNMCIKYFEGATPERAADAAGYAENPLASAAEGIFERYAA 435

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460
            M+      A  +++ L+   + Y +  +PW L K +P +A   + V++  +E IR  A 
Sbjct: 436 KMEAFAYGDAAKEIMDLIHAANHYIEDSEPWTLAK-DPAKAGELANVIWNLLEAIRISAH 494

Query: 461 LLQAFVPKLA 470
           LL   +P  +
Sbjct: 495 LLMPLMPSTS 504


>gi|168488458|ref|ZP_02712657.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183573094|gb|EDT93622.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332073087|gb|EGI83566.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 665

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T +V+VD+ +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 CLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|15606482|ref|NP_213862.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|7388279|sp|O67298|SYM_AQUAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78101749|pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101750|pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101753|pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|78101754|pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|2983692|gb|AAC07256.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 497

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/498 (41%), Positives = 299/498 (60%), Gaps = 20/498 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N  PH+GHAY  I AD +AR++RL   DV F TGTDEHG KI K A+ 
Sbjct: 5   KKFYVTTPIYYVNDVPHLGHAYTTIAADTIARYYRLRDYDVFFLTGTDEHGLKIQKKAEE 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K  VD+N+  F+ + + L I Y  FIRTT+  H    + ++++   +GDIY G Y
Sbjct: 65  LGISPKELVDRNAERFKKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIYLGEY 124

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E + ++ E+   A+           ++++E  YFFRLS YQDKLL  YE +P
Sbjct: 125 EGWYCVGCEEFKSEAEL---AEDHTCPIHQKKCEYIKEPSYFFRLSKYQDKLLELYEKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EFI P  RRNE+ISFVK GLKDLS++R      WGI +P DP++ +YVW DAL NY++  
Sbjct: 182 EFIQPDYRRNEIISFVKQGLKDLSVTRPRSRVKWGIPVPFDPEHTIYVWFDALFNYISAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                 +     +WPADLH++GKDILRFH +YWPAFL+S    LPKKVF+HG+   +G+K
Sbjct: 242 ------EDKVEIYWPADLHLVGKDILRFHTVYWPAFLMSLGYELPKKVFAHGWWTVEGKK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP EV++E G+D +RYFL+RE+  G+DG + K  +  R+N +LAN IGNL 
Sbjct: 296 MSKTLGNVVDPYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNRINGELANEIGNLY 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR V+M  K   G +   GA    DE    +    ++     M+    ++A+ +++   S
Sbjct: 356 SRVVNMAHKFLGGEV--SGA---RDEEYAKIAQESIKNYENYMEKVNFYKAIEEILKFTS 410

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++Y D ++PW L K+   +    VLY  V+ +  L  LL    P   NK+ + L +  
Sbjct: 411 YLNKYVDEKQPWALNKERKKEELQKVLYALVDGLFVLTHLLYPITP---NKMKEALQMLG 467

Query: 482 ENRCFQSLDQRLKPGFML 499
           E    + L    K  + L
Sbjct: 468 EKEFLKELKPYSKNTYKL 485


>gi|71415852|ref|XP_809978.1| methionyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874442|gb|EAN88127.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 765

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/495 (41%), Positives = 288/495 (58%), Gaps = 18/495 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I+T I Y NA PHIGH Y  +I DV+ R+H + G  V   +GTDEHGQK+A+AA+  G
Sbjct: 234 FFITTPIYYVNAAPHIGHVYSTLIVDVIGRYHTMKGERVFAMSGTDEHGQKVAEAARQKG 293

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +    F  Q SR F D  + +    D FIRTT + H      LW K+  KGDIY G Y G
Sbjct: 294 MNPYDFTCQVSREFIDCFEQMGYHMDYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WYS+ DE++     V  G D      +      + V W+ E+ Y FRLSA++++LL +Y 
Sbjct: 354 WYSVSDESFLTAQNVTDGVDKDGKPCKVSLESGHVVTWLAEDNYMFRLSAFRERLLEWYN 413

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWIDALTNY 238
           ++P  I+P  RR EVI  V+ GL DLS+SR      DW I +P +P + +YVW+DAL+NY
Sbjct: 414 NNPGCIVPEFRRREVIRTVEKGLNDLSVSRTREAVQDWAIPVPGNPNHCIYVWLDALSNY 473

Query: 239 LTTTGYLDNPDGSKAKF---------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            T +       G + +          +PAD+HVIGKDIL+FHAIYWPAFL+SA LPLPK 
Sbjct: 474 YTASRLRLGKSGEELELVEDHRVLERFPADIHVIGKDILKFHAIYWPAFLISAGLPLPKT 533

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + +HG+     +KISKSLGNV DP+E   E G DAL+YFL+RE     DG Y    +  R
Sbjct: 534 IVAHGWWTKDRKKISKSLGNVFDPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMISR 593

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +N +LA+ +GNLV R  S  +  +  + PTP A+   DE+++ +   +   +        
Sbjct: 594 LNGELADTLGNLVMRCTSAKINVHR-VWPTPDAYNAKDEALIQLIKDLPGVVDHFFLIPD 652

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + +ALA V  L+  ++ Y     PW L KT+PDR  TVLY+T+E  R   ++L   + + 
Sbjct: 653 VQKALAAVFDLLRAINSYVTENAPWRLVKTDPDRLRTVLYITMEGTRLATLMLSPVLSQK 712

Query: 470 ANKIFDILFVADENR 484
           A  IFD+L V + NR
Sbjct: 713 APVIFDMLGVPEANR 727


>gi|327470507|gb|EGF15963.1| methionine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 665

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSM+ K +DG IP      T+ D ++  V +  + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMVNKYFDGQIPAYEENVTDFDGALAQVAAESIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|307151236|ref|YP_003886620.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306981464|gb|ADN13345.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 533

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/487 (41%), Positives = 289/487 (59%), Gaps = 12/487 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  ++T + Y N  PHIG AY  +IADV+AR+ RL G  V+F TGTDEHGQKI + A+ 
Sbjct: 9   KKFALTTPLYYVNDVPHIGSAYTTMIADVIARWKRLQGYSVMFITGTDEHGQKIQRTAEA 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   DQ   +F  + D L+I YD F RTT K H    +  ++++ D+GDIY    
Sbjct: 69  KGLAPQEHCDQIVTSFESLWDKLNIHYDRFSRTTAKPHQSIVKEFFQRVWDQGDIYLDQQ 128

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E +  + E+ +    Q +       +W +EE YFFRLS YQ KL  +Y   P
Sbjct: 129 IGWYCVACEEFKEERELTENGSCQIHTNLK--AEWRDEENYFFRLSKYQQKLAEFYAEKP 186

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI P  RRNEV+SF+K GL+D S+SR   DWG  +P DP + +YVW DAL  Y+T    
Sbjct: 187 EFIRPESRRNEVLSFLKQGLQDFSISRVNLDWGFPVPSDPNHTIYVWFDALLGYIT--AL 244

Query: 245 LDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           LD  D      + +++WP +LH+IGKDILRFHAIYWPA L+SA LPLP++VF HGF+   
Sbjct: 245 LDPNDEPTLKNALSRWWPINLHLIGKDILRFHAIYWPAMLMSAGLPLPEQVFGHGFLTKD 304

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN +DP +++     DA+RY+ ++EI  GKDG +++      +NADLAN +G
Sbjct: 305 GLKMGKSLGNTLDPFDLLNRYSADAVRYYFIKEIEFGKDGDFNETRFVNILNADLANDLG 364

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQVI 418
           NL++R++ M+ K   G  P   A    + + L +    L E +RE ++    ++A  ++ 
Sbjct: 365 NLLNRTLGMVQKYCKGKGPALKATEIDNNNPLKIIGEGLSERVRECLEALKFNQACEEIF 424

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SL+   +++ D   PW L K+        +LY  +E +R  A LL   +P L+ +I+  L
Sbjct: 425 SLIRACNKFIDESAPWSLYKEKKQAEVEEILYAVLESVRLAAYLLSPIIPNLSTRIYQQL 484

Query: 478 -FVADEN 483
            F  D N
Sbjct: 485 GFSVDFN 491


>gi|261417229|ref|YP_003250912.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373685|gb|ACX76430.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 690

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/468 (38%), Positives = 294/468 (62%), Gaps = 8/468 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGH+Y  ++AD+L RFH++ G    F TGTDEHGQK+ +AA  
Sbjct: 2   KNFYVTTPIYYVNDAPHIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKVQRAAAK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             VT +  VD+    F D+   ++I  D FIRTT   H    +   +K+ DKG+IY   Y
Sbjct: 62  RNVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+ +E ++++DE+    + +     H PV+W++E+ YFF++SAYQ KL+ Y ESH 
Sbjct: 122 EGWYSVGEERFFSEDEL---DENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYLESHK 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           ++I+P  R NE+  F++  L DL +SR      WGI +P DP Y+ YVW DAL NY++ +
Sbjct: 179 DWIVPDYRWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVWFDALLNYVSAS 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGE 301
                        WPA  H+IGKDIL  H++YWP  L++ ++PLP+ + +HG ++++ GE
Sbjct: 239 TAFHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLVNGGE 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +E+ G+DA RYFL RE+  G+D  +  +G  +R+N+DLAN +GN+
Sbjct: 299 KMSKSAGNVVNPMDYMEKYGIDAFRYFLAREMVVGQDANFTHEGFVRRINSDLANDLGNV 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   ++L ++ G++P P A  ++   ++++ +RV   + E +    + + + ++++LV
Sbjct: 359 LNRVHRLVLTNFGGVLPAPNALDDAANEVITIANRVRTNVMEWVPQVKLSQVVEEIMTLV 418

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             ++RY + + PW+L K  +  D  +TVLY++ E +R    +L   +P
Sbjct: 419 RSINRYLEIKAPWKLAKDESKKDELATVLYISAEAVRLSLSMLWPVIP 466


>gi|307706348|ref|ZP_07643160.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618266|gb|EFN97421.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 665

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/522 (39%), Positives = 320/522 (61%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAEVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     ++ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  + + L +A E    ++L+    P    +     PIFPR 
Sbjct: 480 SRAVLNQLGLA-EVSSLENLNLADFPADVTVVAKGTPIFPRL 520


>gi|160878187|ref|YP_001557155.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160426853|gb|ABX40416.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 664

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/491 (41%), Positives = 304/491 (61%), Gaps = 21/491 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAIAY + +PHIG+ YE+++AD +ARF RL+G +V F TGTDEHGQKI + A   GV
Sbjct: 7   YITTAIAYTSGKPHIGNTYEIVLADSIARFKRLEGYEVFFQTGTDEHGQKIEEKAAEVGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K FVD+ +   +D+ D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG Y G 
Sbjct: 67  SPKEFVDKVAGGIKDIWDLMNSSYDKFIRTTDVDHEKQVQKIFKKLYDQGDIYKGNYEGM 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++   ++  G             Q  +EE YF +LS Y  +L+ +  +HPEFI
Sbjct: 127 YCTPCESFFTASQLVNGKCPDC----GRECQPAKEEAYFLKLSNYTGRLIDHINTHPEFI 182

Query: 188 LPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R+NE++ +F+  GL+DL +SR +F WGI +  DP++++YVWIDAL+NY+T  GY  
Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVIYVWIDALSNYITGIGY-- 240

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298
           + DG+      KFWPADLH+IGKDILRFH IYWP  L++ +LPLPK+VF H ++L     
Sbjct: 241 DCDGNSTEQFNKFWPADLHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLQTDPN 300

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKS GNV+   +++E  GVDA+RYF++ E+    DG  + + +  R+N+DL
Sbjct: 301 AKDGSGVKMSKSRGNVLYADDLVEFFGVDAVRYFVLHEMPFDNDGVINWELMVDRMNSDL 360

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN +GNLV+R++SM  K ++G++         D  ++ V ++   ++   M N  +  A+
Sbjct: 361 ANTLGNLVNRTISMSNKYFEGVVNKTDVTEPVDADLIEVVTKTRDKVVAKMANLRVADAI 420

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           +++ +L    ++Y D   PW L K    +A    VLY  VE I   A LL+ F+P+ A K
Sbjct: 421 SEIFTLFKRCNKYIDETMPWALAKEEEKKARLENVLYNLVESICIGANLLEPFLPESAEK 480

Query: 473 IFDILFVADEN 483
           I   L     N
Sbjct: 481 ILAQLNAKKRN 491


>gi|311743181|ref|ZP_07716989.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313861|gb|EFQ83770.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 529

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/528 (40%), Positives = 309/528 (58%), Gaps = 31/528 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGH Y   I DVLAR+HR  G  V + TG DEHGQK+ + A  AG
Sbjct: 6   FYVTTPIYYVNDAPHIGHGYTTTIGDVLARWHRQRGEQVHYLTGVDEHGQKVLRKAAAAG 65

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           V+ + +VD+     ++ M   +D S DDFIRTTE RH    +  W+++++ G +Y+G +S
Sbjct: 66  VSPQDWVDRLVETEWKPMLATIDASNDDFIRTTEPRHARGVQAFWERLNEAGAVYRGEFS 125

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQH-------NPVQWMEEEGYFFRLSAYQDKLLS 178
           GWYS+  E +  DD+V    DG+  +A H       + V+ + E  YFFRLS +Q +LL 
Sbjct: 126 GWYSVGSEEFVGDDDVR---DGEGDDAGHRVSVLDGSRVEHVTEANYFFRLSDFQQRLLD 182

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +Y++HP+F+ P   RNEV+SFV  GL DLS+SR TFDWGI +P D  +I YVWI+AL NY
Sbjct: 183 FYDAHPDFVQPASARNEVVSFVSRGLTDLSISRSTFDWGIPVPWDDDHIFYVWIEALLNY 242

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY  + +    + WPADLH++GKDI+RFHAI WPA L++A LP+P +VF+HG+IL 
Sbjct: 243 VTAVGYGQD-EARFDRLWPADLHIVGKDIVRFHAIIWPAMLMAAGLPVPHRVFAHGWILV 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS  N I P ++++  G DA RY+  R +  G DG    + +  R +A+LANG 
Sbjct: 302 GGQKMSKSKANGIHPDQIVQTFGSDAYRYYFTRALTFGNDGSISWEDIGARYHAELANGF 361

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL SR  +MI K + G++P  GA   ++ +I+      + +    +     H A+A V 
Sbjct: 362 GNLASRVAAMIGKYHGGVLPPAGAGGAAEATIVDGVVGAVADAEAAIDAVAPHDAVAAVW 421

Query: 419 SLVSEVDRYFDAQKPWEL-------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            +V +++ Y   Q PW +        +   +R +T+L    E +R LA+LL   +PK   
Sbjct: 422 RVVDDLNGYVTDQAPWTVAKAAADGDEAAAERLATILVTLAEGLRALAVLLHPVMPKATA 481

Query: 472 KIFDILFVADENRCFQSLDQR---------LKPGFMLHKTFDPIFPRF 510
            ++D L   D        DQR         L  G  + K+ D +FPR 
Sbjct: 482 VLWDSLGAGDAIGPLA--DQRVADVARWGQLPAGTRVVKS-DALFPRI 526


>gi|301799802|emb|CBW32371.1| methionyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 665

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEKSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|253827052|ref|ZP_04869937.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510458|gb|EES89117.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 654

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/484 (42%), Positives = 307/484 (63%), Gaps = 21/484 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  IIAD LAR+HR+   +V F TGTDEHGQKI ++A+  
Sbjct: 8   KFYITTPIYYVNDVPHIGHAYTTIIADTLARYHRIQNEEVWFLTGTDEHGQKIQQSAEKN 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               K +VD+ S  F+++ D   ISYD FIRTT+  H ++ R ++ K+  KGDIYKG Y 
Sbjct: 68  NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYE 127

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYY 180
           G Y +  E+++        A  Q  N ++ P        ++EE YFF+LSAY+D+LL + 
Sbjct: 128 GNYCISCESFF--------AKSQLINHKNCPDCGKETNLLKEESYFFKLSAYEDRLLQWI 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDAL 235
           ES+P+ ILP  RRNEVI+F+K GL+DLS++R +FDWGIK+P     +D +++MYVW+DAL
Sbjct: 180 ESNPDCILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDAL 239

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYL+  GY +N   +K +FWPA+ H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+
Sbjct: 240 VNYLSALGY-ENSKENKMEFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKS+GNV++P EV++  G+D  RYF++RE+  G+DG + +  L +R NADL 
Sbjct: 299 WTKEGAKMSKSIGNVVNPKEVVDLYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLG 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R + M  K ++  +     ++ +S E+  +    +L  ++  M    IHR L
Sbjct: 359 NDLGNLLNRLLGMGAKYFNNSLQVDLKSYKQSFEAESTTIKTILGSLKNFMNEVQIHRYL 418

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++  + S  +     ++PW+L K+      + +L     ++ + A+ L   +P  A KI
Sbjct: 419 EELWKIFSLGNGIIAKKEPWKLIKEQKEQEVAELLVFIANLLIKGALCLYPCMPDSAKKI 478

Query: 474 FDIL 477
             + 
Sbjct: 479 LSVF 482


>gi|157149888|ref|YP_001450809.1| methionyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074682|gb|ABV09365.1| methionine-tRNA ligase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 666

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/521 (38%), Positives = 318/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   +  ++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFQMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +PT     T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVAAKSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     ++ ++V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|15458285|gb|AAK99500.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae R6]
          Length = 679

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 494 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|327474600|gb|EGF20005.1| methionine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 666

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/522 (38%), Positives = 319/522 (61%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ +G++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEESGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D  +  V S  + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGPLAQVASESIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPK 468
           RAL  V +L+S  ++Y D   PW L K      + A+ + ++T   +R +A +++ F+ +
Sbjct: 421 RALEVVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLTAS-LRVVAHMIEPFMME 479

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  +   L +   +        +L  G ++ +   PIFPR 
Sbjct: 480 TSKAVLSQLGLPQADSLENLAIDQLPAGLIVVEKGTPIFPRL 521


>gi|239930094|ref|ZP_04687047.1| methionyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438432|ref|ZP_06577822.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291341327|gb|EFE68283.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 538

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/481 (41%), Positives = 301/481 (62%), Gaps = 13/481 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V F TGTDEHGQKI + A+  GV
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWFLTGTDEHGQKIMRTAEANGV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + + + D+  + ++  +   L+I+ DDFIRTT+KRH D  +   + + DKG+IYKG Y G
Sbjct: 75  SPQEWADKLVTESWEPLWAHLEIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    E+  G +G+Y   +       PV+ + EE YFF+LS Y DKLL++YE
Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEYAGQKLCPIHKKPVEILSEENYFFKLSEYGDKLLAHYE 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +NP+  +  F PAD+H++GKDILRFHA+ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYNENPEKFEETF-PADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKVAANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  ++++++    ++ + E    + ++L     +  V   
Sbjct: 373 ASRVAAMVGKYFGGELPEATASGDAEKAVHDGLAKAVAEADRKIGDELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K   D    R +T+LY   E +R +A+LL   +P+ + K++D 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTSDEGKARLATILYTAAESLRAVAVLLNPVMPETSQKLWDS 492

Query: 477 L 477
           L
Sbjct: 493 L 493


>gi|225856462|ref|YP_002737973.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225725786|gb|ACO21638.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 665

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|325478237|gb|EGC81356.1| methionine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 647

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/492 (41%), Positives = 312/492 (63%), Gaps = 12/492 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI K
Sbjct: 1   MTEKKPYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLLGYDTYLTTGTDEHGQKIMK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AGV  + FVD+ +    D+ + L+I YD FIR+TE +H      ++ K+ ++GDIY
Sbjct: 61  SAEAAGVDPQSFVDKIASETIDLWEKLEIDYDTFIRSTESQHEKDVEEIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E +++  ++    DG+  +   + V++ EEE YFFRLS Y D+L   +
Sbjct: 121 KGEYKGYYCTPCETFWSKSQL---EDGKCPDCGRD-VEYQEEETYFFRLSKYTDRLKELF 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP+F+ P  R+ E+++ F+  GL DLS++R TFDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KDHPDFLEPAFRQKEMLNNFIDKGLSDLSVTRNTFDWGVDVPFDNEHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY DN +  + K+WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL  
Sbjct: 237 SAIGYGDNKEKFE-KYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  +++  GVDAL++F++RE   G DG +      +R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSARKFMERYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NLVSR+ SMI K Y+G +   G+  ++ D+ ++++         + M     ++AL  + 
Sbjct: 356 NLVSRTTSMIDK-YNGGVVRKGSVADTYDDELIALAEETYTNFNKLMDEFNFNQALEAIW 414

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +L+   ++Y D  +PW L +   N DR   VLY   E IR +A L++ F+      I + 
Sbjct: 415 TLIRRANKYVDETEPWILGRDDKNSDRLDRVLYNLAETIRIVAQLIEPFMKNTTKIILEK 474

Query: 477 LFVADENRCFQS 488
             +  +N+ F+S
Sbjct: 475 --IGTDNKGFES 484


>gi|149010582|ref|ZP_01831953.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168490882|ref|ZP_02715025.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168492944|ref|ZP_02717087.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221231586|ref|YP_002510738.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854300|ref|YP_002735812.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|147765063|gb|EDK71992.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|183574634|gb|EDT95162.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577043|gb|EDT97571.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220674046|emb|CAR68559.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722945|gb|ACO18798.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 665

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|149003418|ref|ZP_01828307.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237649434|ref|ZP_04523686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821933|ref|ZP_04597778.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758601|gb|EDK65599.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 665

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPEGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|15900681|ref|NP_345285.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|116516229|ref|YP_816183.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148989872|ref|ZP_01821166.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|161410751|ref|NP_358290.2| methionyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|168484447|ref|ZP_02709399.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|194397413|ref|YP_002037433.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|54039688|sp|P67581|SYM_STRR6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54042048|sp|P67580|SYM_STRPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14972263|gb|AAK74925.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|116076805|gb|ABJ54525.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147924814|gb|EDK75898.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|172042338|gb|EDT50384.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|194357080|gb|ACF55528.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|332076067|gb|EGI86533.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 665

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|306829685|ref|ZP_07462875.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428771|gb|EFM31861.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 679

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/522 (39%), Positives = 318/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D  + +V    + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNELATVAELSIADYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A +++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHMIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A E    ++L+   L  G  +     PIFPR 
Sbjct: 494 SRAVLSQLGLA-EVSSLENLNLADLPSGVNVVAKGTPIFPRL 534


>gi|24380018|ref|NP_721973.1| methionyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|24378007|gb|AAN59279.1|AE014994_9 putative methionyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 669

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTEKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            ++ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++K+  +GDIY
Sbjct: 61  KSEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +E+++  DG+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEIFRDEDGKVIGGIAPSGHEVEWVSEESYFLRLSNYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  +L +P+++ +
Sbjct: 241 ALLNYATALGYGQDAHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLKMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G IP      T+ D  + +V +  L +  + M      
Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEIPAYVENVTDFDADLAAVVADNLAQYHKQMNAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K    R   + V+      +R +A L+Q F+   
Sbjct: 421 RALETVWNIISRTNKYIDETTPWVLAKDKAKRDDLAAVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +A +          L  G  +     PIFPR 
Sbjct: 481 SNAIMEQLGLAGQFDLEGLELAGLPTGVKVIAKGTPIFPRL 521


>gi|298503207|ref|YP_003725147.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|298238802|gb|ADI69933.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
          Length = 679

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 494 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|225858596|ref|YP_002740106.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225720402|gb|ACO16256.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|332077203|gb|EGI87665.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 665

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|224417704|ref|ZP_03655710.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 607

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/484 (42%), Positives = 307/484 (63%), Gaps = 21/484 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  IIAD LAR+HR+   +V F TGTDEHGQKI ++A+  
Sbjct: 4   KFYITTPIYYVNDVPHIGHAYTTIIADTLARYHRIQNEEVWFLTGTDEHGQKIQQSAEKN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               K +VD+ S  F+++ D   ISYD FIRTT+  H ++ R ++ K+  KGDIYKG Y 
Sbjct: 64  NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYY 180
           G Y +  E+++        A  Q  N ++ P        ++EE YFF+LSAY+D+LL + 
Sbjct: 124 GNYCISCESFF--------AKSQLINHKNCPDCGKETNLLKEESYFFKLSAYEDRLLQWI 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDAL 235
           ES+P+ ILP  RRNEVI+F+K GL+DLS++R +FDWGIK+P     +D +++MYVW+DAL
Sbjct: 176 ESNPDCILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDAL 235

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYL+  GY +N   +K +FWPA+ H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+
Sbjct: 236 VNYLSALGY-ENSKENKMEFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKS+GNV++P EV++  G+D  RYF++RE+  G+DG + +  L +R NADL 
Sbjct: 295 WTKEGAKMSKSIGNVVNPKEVVDLYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLG 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R + M  K ++  +     ++ +S E+  +    +L  ++  M    IHR L
Sbjct: 355 NDLGNLLNRLLGMGAKYFNNSLQVDLKSYKQSFEAESTTIKTILGSLKNFMNEVQIHRYL 414

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++  + S  +     ++PW+L K+      + +L     ++ + A+ L   +P  A KI
Sbjct: 415 EELWKIFSLGNGIIAKKEPWKLIKEQKEQEVAELLVFIANLLIKGALCLYPCMPDSAKKI 474

Query: 474 FDIL 477
             + 
Sbjct: 475 LSVF 478


>gi|172036861|ref|YP_001803362.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171698315|gb|ACB51296.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 535

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/489 (41%), Positives = 291/489 (59%), Gaps = 14/489 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  ++T + Y N  PHIG AY  IIADV+AR+ RL G DVLF TGTDEHGQKI + A+ 
Sbjct: 9   KKFALTTPLYYVNGVPHIGSAYTTIIADVIARYKRLIGEDVLFITGTDEHGQKIQRTAEE 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   DQ   +F  +   LDI YD F RTT  RH    +  ++++ D GDIY    
Sbjct: 69  KGLLPQDHCDQIVASFEALWQKLDIQYDRFSRTTAPRHQAIVKEFFERVWDNGDIYLAQQ 128

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY ++ E +    E+ +  DG      +   +W +EE YFF+LS YQ KL   Y+++P
Sbjct: 129 QGWYCVQCEEFKEKRELLE--DGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELYKNNP 186

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+++F+  GL+D S+SR    WG  IP DP + +YVW DAL  Y+T    
Sbjct: 187 QFIEPESRRNEILNFINQGLQDFSISRVNLAWGFPIPTDPDHTIYVWFDALLGYVTA--- 243

Query: 245 LDNPD------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L +P+       + + +WP +LH+IGKDILRFHAIYWPA L+SA LPLP+K+F HGF+  
Sbjct: 244 LLDPEEEPTLNNALSDWWPINLHLIGKDILRFHAIYWPAMLMSAKLPLPQKIFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DP E++++ G DA+RY+ ++EI CGKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTLDPFELVDKYGADAVRYYFLKEIECGKDGDFNETRFVNILNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           GNL++R++ M  K   G +P   A     E  L      L E   N    L  +    ++
Sbjct: 364 GNLLNRTLGMTQKYCQGSLPKMTATELPQEHSLKTIGLTLGEKVINAYETLKFNEGCEEI 423

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++L+   +++ D Q PW L K+        +LY  +E +R  A LL   +P L++KI+  
Sbjct: 424 LTLIQAGNKFIDEQAPWRLFKEGKQAEVEKILYGVLESVRLAAYLLAPIIPNLSSKIYQQ 483

Query: 477 L-FVADENR 484
           L F  D N+
Sbjct: 484 LGFSVDFNQ 492


>gi|301793944|emb|CBW36340.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|307127662|ref|YP_003879693.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484724|gb|ADM91593.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|148997133|ref|ZP_01824787.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149007671|ref|ZP_01831288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|168575450|ref|ZP_02721386.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067392|ref|YP_003876358.1| methionyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147756833|gb|EDK63873.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760826|gb|EDK67797.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|183578466|gb|EDT98994.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408929|gb|ADM84356.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|322376351|ref|ZP_08050844.1| methionine--tRNA ligase [Streptococcus sp. M334]
 gi|321282158|gb|EFX59165.1| methionine--tRNA ligase [Streptococcus sp. M334]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/521 (38%), Positives = 316/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQSYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVDFFKAHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      TE D ++ +V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQVPAYVEGVTEFDHALANVAEQSIADYHTHMEAIDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520


>gi|225861309|ref|YP_002742818.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229840|ref|ZP_06963521.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254148|ref|ZP_06977734.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|225726725|gb|ACO22576.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390144|gb|EGE88487.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|315221903|ref|ZP_07863814.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188869|gb|EFU22573.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/520 (39%), Positives = 314/520 (60%), Gaps = 14/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI + A+
Sbjct: 3   EKNFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +   +++ ++LDISYD FIRTT+  H      +++++  + DIY G 
Sbjct: 63  EAGITPQAYVDSMAVGVKELWELLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++   G+         + V+W+ EE YF RL  Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWIDAL 
Sbjct: 183 EFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           NY T  GY  + D +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ +HG
Sbjct: 243 NYATALGYGQDADANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLIAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 303 WFVMKDGKMSKSKGNVVYPEILVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG +P      TE D  + +V +  +    + M      RA
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGQVPIYKENVTEFDADLAAVVAENIAIYHKQMDAVDYPRA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K     D  + V+   V  +R +A L+Q F+   +N
Sbjct: 423 LEAVWNIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLVASLRVVAHLIQPFMMTTSN 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            I + L +   +   ++LD   L  G  +     PIFPR 
Sbjct: 483 AIMEQLGLG-TDFDLENLDLAELPTGLTVVAKGTPIFPRL 521


>gi|169832629|ref|YP_001694248.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995131|gb|ACA35743.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 665

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPIGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|167747813|ref|ZP_02419940.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662]
 gi|167653175|gb|EDR97304.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662]
          Length = 648

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/493 (41%), Positives = 309/493 (62%), Gaps = 15/493 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A 
Sbjct: 3   KEPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++K++ ++GDIYKG 
Sbjct: 63  EKGVTPKEFVDDVAGEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYEQGDIYKGH 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++    DG+  +     VQ  +EE YF +LS Y D+L+ Y  +H
Sbjct: 123 YEGLYCTPCESFFTESQL---VDGKCPDCGRE-VQPAKEEAYFLKLSKYADRLIDYINAH 178

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+++ F+  GL+DL +SR +F WGI +  D  +++YVW+DALTNY+T  
Sbjct: 179 PEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITGI 238

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           GY  + DG+      K WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L 
Sbjct: 239 GY--DCDGNSTDQFKKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQ 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   ++ E   VDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 297 GDGKMSKSKGNVLYADDLAEMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K +DG++   G   E D+ + +V +    ++++ M    +  A+ ++ 
Sbjct: 357 GNLVNRTISMSNKYFDGVVEDKGVEDEFDDQLKAVVTGARDKVQKKMDVLKVADAMTEIF 416

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++    ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P+   KI   
Sbjct: 417 NVFKRCNKYIDETMPWVLAKDEAKKDRLATVLYNLVEGILTGAALLEPYMPETVEKILKQ 476

Query: 477 LFVADENRCFQSL 489
           L    E R F+ L
Sbjct: 477 LNA--EPRRFEDL 487


>gi|325833648|ref|ZP_08166097.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325485572|gb|EGC88041.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 529

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 283/480 (58%), Gaps = 7/480 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
            +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A + G+T
Sbjct: 8   FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     FRD  D+L I+Y DF+RTTE RH  T +  W+ + DKG  YKG Y GWY
Sbjct: 68  PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSYEGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186
            + +E YY + ++ K  +G+        PVQ    EE +FF+LS + DKLL++YE +P+F
Sbjct: 128 CVHEETYYAESDLEKNDEGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT  GY D
Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247

Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L KGEK+S
Sbjct: 248 EGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLTKGEKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN + P ++ +  GVDA RY+ + ++  G DG    + + +  NADLAN  GNL SR
Sbjct: 308 KSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367

Query: 365 SVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +M  K +DG +P  P     ++  + ++   +  E    +       A A V  L   
Sbjct: 368 VFNMTKKYFDGQVPEVPAEVLANENPLRAITEELYAEYDAALGAVDFTAAAAAVQKLAGR 427

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           V+ Y +   PW L K+       + V+Y  +E IR +A+ +  F+P  + ++F  L + D
Sbjct: 428 VNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFRRLSLGD 487


>gi|227501185|ref|ZP_03931234.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216586|gb|EEI81990.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 645

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/493 (41%), Positives = 316/493 (64%), Gaps = 14/493 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI K
Sbjct: 1   MTEKKPYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLLGYDTFLTTGTDEHGQKIMK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +AQ+AGV  + FVD+ +    ++   L+I YD FIR+TEK+H +  + ++ K+ ++GDIY
Sbjct: 61  SAQDAGVNPQAFVDKIASETIELWKKLEIDYDRFIRSTEKQHEEDVKNIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E ++ + ++    DG+  +   + V + EEE YFFRLS Y D+L   +
Sbjct: 121 KGEYKGYYCTPCETFWTEAQL---EDGKCPDCGRD-VDYQEEETYFFRLSKYTDRLKELF 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEF+ P  R+ E+++ F+  GL DLS++R +FDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KDHPEFLEPAFRQKEMLNNFIDKGLSDLSVTRNSFDWGVDVPFDNEHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  G+ D+ +  + K+WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL  
Sbjct: 237 SAIGFGDDKEKFE-KYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  +++  GVDAL++F++RE   G DG +      +R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSAKKFMERYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NLVSR+ SMI K Y+G +   G  ++S D+ ++++ S    +  + M     + A+  + 
Sbjct: 356 NLVSRTTSMIDK-YNGGVVRKGTVSDSFDDELIALSSETYSKFNKLMNEFNFNAAIEAIW 414

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            L+   ++Y D  +PW L +   N +R   VLY   E IR +A L++   P + N   +I
Sbjct: 415 VLIRRANKYVDETEPWILGRDEANKERLDRVLYNLAETIRIVAQLIE---PVMKNTTREI 471

Query: 477 L-FVADENRCFQS 488
           L  +  +N+ F+S
Sbjct: 472 LEKIGTDNKGFES 484


>gi|307708494|ref|ZP_07644959.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615410|gb|EFN94618.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 665

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  +IE  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAQVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L +A E    ++L+    P    +     PIFPR 
Sbjct: 480 SRAVLTQLGLA-EVASLENLNLADFPADVTVVAKGTPIFPRL 520


>gi|254390367|ref|ZP_05005584.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813846|ref|ZP_06772489.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442264|ref|ZP_08216998.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704071|gb|EDY49883.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326445|gb|EFG08088.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
          Length = 537

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/485 (41%), Positives = 303/485 (62%), Gaps = 13/485 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+    Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + 
Sbjct: 8   KQGAAYYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRT 67

Query: 62  AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A+  GVT + + D+  S  ++ + + LDI+ DDFIRTTEKRH D  +   + + DKG+IY
Sbjct: 68  AETHGVTPQEWCDKLVSEAWKPLWEHLDIANDDFIRTTEKRHTDRVKEFVQDLYDKGEIY 127

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDK 175
           KG Y G Y +  E Y    ++  G +G+Y   +       PV+ ++EE YFF+LS Y  K
Sbjct: 128 KGGYEGPYCVGCEEYKLPGDLIDG-EGEYAGQKLCPIHKKPVELLKEENYFFKLSEYGPK 186

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  YES+P FI P   RNEV++FVK GL+DLS+SR TFDWG+K+P D ++++YVWIDAL
Sbjct: 187 LLELYESNPGFIQPESARNEVVNFVKQGLQDLSISRSTFDWGVKVPWDEKHVIYVWIDAL 246

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY T  GY +NP+   + F PA++H++GKDILRFHAI WPA L++  LP+P +V ++G+
Sbjct: 247 LNYATAVGYNENPEKFASTF-PANVHLVGKDILRFHAIIWPAMLMANGLPVPGRVAANGW 305

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++  GEK+SKS    I P ++    GVDA R++ +R I+ G+DG +  +    R  ++LA
Sbjct: 306 LMVGGEKMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISFGQDGSFSWEDFSVRYTSELA 365

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N  GNL SR  +M+ K + G +P   A  E++ ++    ++ + E    + +++     +
Sbjct: 366 NDYGNLASRVAAMVGKYFGGSLPEATAAGEAERAVQEGLAKAVAEADRKIGDEIDFQGGI 425

Query: 415 AQVISLVSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLA 470
             V   V +V+ Y   Q+PW++ K T+P+   R +T+LY   E +R +A+LL   +P+ +
Sbjct: 426 LAVFDFVKQVNGYLTEQEPWKVAKDTSPEGQARLATILYTAAEALRGVAVLLNPVMPRTS 485

Query: 471 NKIFD 475
             ++D
Sbjct: 486 QALWD 490


>gi|262283105|ref|ZP_06060872.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261357|gb|EEY80056.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 666

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/521 (38%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P +R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 181 RLVEFFKSHPDFITPDDRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 241 ALLNYVTALGYGQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  +IE  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V +  + +  + M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVAAESIADYYKYMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     ++ ++V+      +R +A ++  F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIDPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLDLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|322815163|gb|EFZ23882.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 765

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/495 (41%), Positives = 288/495 (58%), Gaps = 18/495 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +++T I Y NA PHIGH Y  +IADV+ R+H + G  V   +GTDEHGQK+A+AA+  G
Sbjct: 234 FFVTTPIYYVNAAPHIGHVYSTLIADVIGRYHTIKGERVFAMSGTDEHGQKVAEAARQKG 293

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +    F  Q SR F D  + +    D FIRTT + H      LW K+  KGDIY G Y G
Sbjct: 294 MNPYDFTFQVSREFIDCFEQMGYHMDYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WYS+ DE++     V  G D      +      + V W+ E+ Y FRLSA++++LL +Y 
Sbjct: 354 WYSVSDESFLTAQNVTDGVDKDGKPCKVSLESGHVVTWLAEDNYMFRLSAFRERLLEWYN 413

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRK---TFDWGIKIPDDPQYIMYVWIDALTNY 238
           ++P  I+P  RR EVI  V+ GL DLS+SR      DW I +P +P + +YVW+DAL+NY
Sbjct: 414 NNPGCIVPEFRRREVIRTVEKGLNDLSVSRTREAVQDWAIPVPGNPNHCIYVWLDALSNY 473

Query: 239 LTTTGYLDNPDGSKAKF---------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            T +       G + +          +PAD+HVIGKDIL+FHAIYWPAFL+SA LPLPK 
Sbjct: 474 YTGSRLRLGNSGEELELVEDHRVLERFPADIHVIGKDILKFHAIYWPAFLISAGLPLPKT 533

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + +HG+     +KISKSLGNV DP+E   E G DAL+YFL+RE     DG Y    +  R
Sbjct: 534 IVAHGWWTKDRKKISKSLGNVFDPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMIAR 593

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +N +LA+ +GNLV R  S  +  +    PTP A+   DE+++ +   +   +        
Sbjct: 594 LNGELADTLGNLVMRCTSAKINVHREW-PTPDAYNAKDEALIQLIKELPGVVDHFFLIPD 652

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + +ALA V  ++  ++ Y     PW L KT+PDR  TVLY+T+E  R   ++L   + + 
Sbjct: 653 VQKALAAVFDVLRAINSYVTENAPWRLVKTDPDRLRTVLYITMEGTRLATLMLSPVLSQK 712

Query: 470 ANKIFDILFVADENR 484
           A  IFD+L V + NR
Sbjct: 713 APVIFDMLGVPEANR 727


>gi|322517312|ref|ZP_08070187.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124009|gb|EFX95562.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 667

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/523 (39%), Positives = 313/523 (59%), Gaps = 23/523 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ AG
Sbjct: 5   FYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEEAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ ++GDIY G YSG
Sbjct: 65  ITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSG 124

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+   G          + V+ + EE YFF+LS Y D L  ++
Sbjct: 125 WYSVSDEEFFTESQLAEVYRDEQGNVIGGVAPSGHEVELVSEESYFFKLSNYADHLTDFF 184

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL NY+
Sbjct: 185 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALINYI 244

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY  +  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 245 TALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVAHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 305 WFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +P      T+ D  +  V +  ++E  + M      RA
Sbjct: 365 ANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVDFPRA 424

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +N
Sbjct: 425 LDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMMTTSN 484

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
            I + L +         L+     GF  + T      PIFPR 
Sbjct: 485 AIMEQLGLP----VVFDLENLELSGFPENVTVVSKGTPIFPRL 523


>gi|212696056|ref|ZP_03304184.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676965|gb|EEB36572.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 645

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/489 (42%), Positives = 305/489 (62%), Gaps = 11/489 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI  AA
Sbjct: 2   DKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G   + FVD+ +   +D+   LDI YD FIR+T+ +H +  + +++ + DKGDIYKG
Sbjct: 62  LSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E+Y+ + ++ +G       A    V   +EE YFF+LS Y DKL   ++ 
Sbjct: 122 EYDGYYCESCESYFTESQLDEGNCPDCGRA----VDHHKEESYFFKLSKYTDKLKELFKD 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEF+ P  R+NE+++ F+  GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT 
Sbjct: 178 HPEFLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY    D  K  K+WPA +H+IGKDI+RFH I WPA L++ ++PLP+KVF+HG+IL   
Sbjct: 238 IGY--GHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDN 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN++ P  ++E  G DAL+YFL+RE   G DG +       R N+DL N +GN
Sbjct: 296 DKMSKSKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  DG+I       E DE ++++C +   +  + M +   + AL  + +L
Sbjct: 356 LLSRTVSMISKYNDGIIKKGSETDEYDEDLINLCHKTYDDFTKLMDDFKFNEALECLWNL 415

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V   ++Y D  +PW L +    +R +TVLY   E +R +A +L+  +     +I   L +
Sbjct: 416 VRRSNKYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGL 475

Query: 480 ADENRCFQS 488
             EN+ F S
Sbjct: 476 --ENKGFAS 482


>gi|146321108|ref|YP_001200819.1| methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751976|ref|YP_003025117.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
 gi|145691914|gb|ABP92419.1| Methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816265|emb|CAZ51893.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
          Length = 667

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 21/523 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A+
Sbjct: 3   KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFFNAHPDFIQPAGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG+
Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVDRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             V +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   +N
Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +      EN  F      L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520


>gi|33303697|gb|AAP22256.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 400

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/400 (46%), Positives = 278/400 (69%), Gaps = 10/400 (2%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
            D +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DIS
Sbjct: 2   GDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDIS 61

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG-- 144
           YDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +    D + +G  
Sbjct: 62  YDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDK 121

Query: 145 -ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKS 202
              G+  ++ H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+ F+K 
Sbjct: 122 VVGGKSPDSGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKP 180

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H+
Sbjct: 181 GLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHL 240

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+
Sbjct: 241 VGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGL 300

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PG 381
           DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP    
Sbjct: 301 DALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKE 360

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             TE DE++++     L+++ E M+N     AL+ +  LV
Sbjct: 361 NVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLV 400


>gi|293365638|ref|ZP_06612347.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|291316006|gb|EFE56450.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037]
          Length = 679

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++ ++LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D S+  V S  + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHSLAQVASESIADYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K   + D+ ++V+      +R +A +++ F+   
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHMIEPFMMGT 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L +A E    ++L     P    +     PIFPR 
Sbjct: 494 SRAVLAQLGLA-EVSSLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|322388105|ref|ZP_08061711.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141126|gb|EFX36625.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 712

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/521 (38%), Positives = 314/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 48  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 106

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 107 KAEEAGITPQAYVDGMAVGVKDLWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 166

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 167 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 226

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 227 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 287 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 346

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 347 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 406

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D+++  V  + + +    M+     
Sbjct: 407 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDKALADVAEQSIADYNAYMEAVDYP 466

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K   + D+ ++V+      +R +A L++ F+ + 
Sbjct: 467 RALEAVWTLISRTNKYIDETAPWVLAKDEAHRDQLASVMSHLAASLRVVAHLIEPFMMET 526

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 527 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 567


>gi|307703587|ref|ZP_07640529.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|307622994|gb|EFO01989.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 665

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++ ++LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D S+  V S  + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHSLAQVASESIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K   + D+ ++V+      +R +A +++ F+   
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHMIEPFMMGT 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L +A E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLAQLGLA-EVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|262037573|ref|ZP_06011029.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748395|gb|EEY35778.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 633

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/511 (39%), Positives = 317/511 (62%), Gaps = 14/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI++ I YPNA PH+G AY  II DV++R+ R+ G DV F TG DEHGQKI +AA+  G
Sbjct: 5   FYITSPIYYPNAAPHVGTAYTTIICDVVSRYKRIKGYDVSFMTGVDEHGQKIQEAAEKNG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + +VD+ S NF  + + L+IS  D++RTT++RH ++ R + K++++KGDIY+G Y G
Sbjct: 65  FTPQQWVDKMSLNFTTLWEKLNISNTDYLRTTQERHIESVREIVKRVNEKGDIYRGEYVG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +  ++++    DG+Y   +   V+   E  YFFRLS Y+D LL + E +P+F
Sbjct: 125 KYSVSEETFVPENQL---VDGKYMGKEVIDVK---EVSYFFRLSKYEDALLKHIEENPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  ++NEV++F+K GL+DLS+SR TFDWGI +  +  +++YVW DALT YLT  G+  
Sbjct: 179 IKPESKKNEVVAFIKQGLQDLSISRTTFDWGIPLELEKGHVIYVWFDALTVYLTGAGFKK 238

Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + +    + W      HVIGKDILRFHAI WPA L+SA + LP  V +HG+   +GEK+S
Sbjct: 239 D-EKEFGEIWSNGKVTHVIGKDILRFHAIIWPAMLMSAGIKLPDTVAAHGWWTVEGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV++P E +++ G+DA RY+L+RE   G+D  Y K  + +R+N+DLAN +GNL++R
Sbjct: 298 KSLGNVVNPEEEVKKYGLDAFRYYLMREATFGQDADYSKKAMIQRINSDLANDLGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K ++  +       + D  I  +  + ++++  +M       AL  +   +  +
Sbjct: 358 TIGMQKKYFNSEVILNKVEDKYDIEIKDLWEKTVEDLDIHMNEFQFSEALKDIWKFIGRM 417

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L K  +  DR STV+Y  V+ + ++++L+  F+P  A KI   L +  +
Sbjct: 418 NKYIDECEPWNLAKDGSKKDRLSTVMYNLVDSLYKISMLIYPFMPDTAEKIVRQLGLNID 477

Query: 483 NRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
               +  D R    +      D   P+FPR 
Sbjct: 478 FNTLKLEDIRKWGSYPAGNKLDEAVPLFPRI 508


>gi|104773496|ref|YP_618476.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103422577|emb|CAI97180.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125127|gb|ADY84457.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 660

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/520 (38%), Positives = 308/520 (59%), Gaps = 16/520 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI + A+
Sbjct: 5   KKTFYITTPIYYPSGRLTIGNAYTTIAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G 
Sbjct: 65  KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+LL
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFI P  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL 
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG++
Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLAN
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364

Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+VSMI +   G++ P      +  + + +V ++ + +   NM       AL 
Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424

Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V  L+S  ++Y D   PW L K+   +  S V+    E +R +AI++   + +   K+F
Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
             L +  E+   + L      GF           PIFPR 
Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521


>gi|257792394|ref|YP_003183000.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476291|gb|ACV56611.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 529

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/480 (42%), Positives = 284/480 (59%), Gaps = 7/480 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
            +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A + G+T
Sbjct: 8   FTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTAADKGMT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     FRD  D+L I+Y DF+RTTE RH  T +  W+ + DKG  YKG Y GWY
Sbjct: 68  PQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSYEGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWM-EEEGYFFRLSAYQDKLLSYYESHPEF 186
            + +E YY + ++ K  +G+        PVQ    EE +FF+LS + DKLL++YE +P+F
Sbjct: 128 CVHEETYYAESDLEKNDEGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFYEENPDF 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT  GY D
Sbjct: 188 IRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLTGIGYGD 247

Query: 247 NPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L KGEK+S
Sbjct: 248 EGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLTKGEKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN + P ++ +  GVDA RY+ + ++  G DG    + + +  NADLAN  GNL SR
Sbjct: 308 KSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTWGNLCSR 367

Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +M  K +DG +P   A   + E+ L ++   +  E    +       A A V  L   
Sbjct: 368 VFNMTKKYFDGQVPEVSAGVLAKENPLRAISDELYAEYDAALGAVDFTAAAAAVQKLAGR 427

Query: 424 VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           V+ Y +   PW L K+       + V+Y  +E IR +A+ +  F+P  + ++F  L + D
Sbjct: 428 VNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFRRLSLGD 487


>gi|284052455|ref|ZP_06382665.1| methionyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291571486|dbj|BAI93758.1| methionyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 534

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/483 (41%), Positives = 286/483 (59%), Gaps = 15/483 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++T + Y N  PHIG AY  I AD +AR+ RL G +VL  TGTDEHGQKI + A+
Sbjct: 8   KKTFSLTTPLYYVNDVPHIGSAYTTIAADAIARWKRLQGYEVLLITGTDEHGQKIQRTAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG + +V  D+   +F  +  +L+I YD F RTT  RH    R  ++++ +  DIY   
Sbjct: 68  EAGCSPQVHCDRIVSSFESLWKLLEIQYDRFSRTTSPRHEAIVREFFQRVWENEDIYLSQ 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYES 182
             GWY +  E +    E+    D +Y     N  V+W +E+ YFFRLS YQ +L + Y  
Sbjct: 128 QQGWYCVSCEEFKEKREL---IDEKYCPIHVNKEVEWRDEQNYFFRLSKYQKQLEALYHD 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P  RRNEVISFV  GL+D S+SR   DWG  +P DP   +YVW DAL  Y+T  
Sbjct: 185 HPDFIGPESRRNEVISFVNQGLQDFSISRVNLDWGFPVPIDPSQTLYVWFDALLGYVTA- 243

Query: 243 GYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
             L +PD         AK+WP DLH+IGKDILRFHA+YWPA L+SA+LPLP ++F HGF+
Sbjct: 244 --LVDPDSEPSLSEAIAKWWPIDLHLIGKDILRFHAVYWPAMLMSADLPLPGRIFGHGFL 301

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+ KSLGN ++P+E++ + G DA+RY+ ++EI  G+DG Y++      +NADLAN
Sbjct: 302 TKDGKKMGKSLGNTLNPVELVNQYGTDAVRYYFLKEIEFGQDGDYNQTRFINTLNADLAN 361

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R++ M  K +DG +P        +D  + S+ S +   + +  +     +   
Sbjct: 362 DLGNLLNRTMKMAAKYFDGRVPAIAVDNISADNHLKSIGSSLGNTVSQFYEKLAFSQVCE 421

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V+ LV   ++Y D Q PW L K     A S V+Y  +E +R  A LL   VP L+  ++
Sbjct: 422 AVLVLVQAGNKYVDEQAPWSLYKRGELSALSEVIYSVLESVRLAAYLLAPIVPNLSTAVY 481

Query: 475 DIL 477
             L
Sbjct: 482 QQL 484


>gi|253755323|ref|YP_003028463.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817787|emb|CAZ55539.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 667

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 319/523 (60%), Gaps = 21/523 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A+
Sbjct: 3   KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  +G+  +      + V W+ EE YF RLS YQDKL+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTSGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG+
Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             V +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   +N
Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +      EN  F      L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520


>gi|312864508|ref|ZP_07724739.1| methionine--tRNA ligase [Streptococcus downei F0415]
 gi|311099635|gb|EFQ57848.1| methionine--tRNA ligase [Streptococcus downei F0415]
          Length = 669

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/519 (38%), Positives = 315/519 (60%), Gaps = 15/519 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + AQ  G
Sbjct: 6   FYVTTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVRYLTGLDEHGQKIQQKAQEVG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +++ +++ ++L+ISYD FIRTT+  H +    +++K+  +GDIY G Y+G
Sbjct: 66  ITPQEYVDGMAKDVKELWELLNISYDQFIRTTDDFHEEVVAKIFEKLLAQGDIYLGEYTG 125

Query: 127 WYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +    EVY+   G          + V+ + EE YFFR+S Y D+L++YY
Sbjct: 126 WYSVSDEEFFTESQLAEVYRDDHGNMIGGVAPSGHEVEKVSEESYFFRMSKYADRLIAYY 185

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEFI P  R NE++ +F++ GL+DL++SR T+ WGIK+P +P++++YVWIDAL NY+
Sbjct: 186 KEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGIKVPSNPKHVIYVWIDALMNYI 245

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           T  GY      +  KFW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +HG
Sbjct: 246 TALGYGQEDHANFDKFWHNDQDHEIIHMIGKDILRFHSIYWPIMLMALDLPLPTRLVAHG 305

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 306 WFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 365

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP+     TE D  + +V +  L +  + M      +A
Sbjct: 366 ANDLGNLLNRTVAMINKYFDGEIPSYQENVTEFDADLAAVVADNLADYHKQMAAVDFPKA 425

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V ++++  ++Y D   PW L K     D+ + V+      +R +A L+Q F+   ++
Sbjct: 426 LDAVWNIIARTNKYIDETAPWVLAKDEAKRDQLADVMAHLAASLRLVAHLIQPFMMSTSD 485

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I   L +  +          L  G  +     PIFPR 
Sbjct: 486 AIMTQLGLGQDFDMANLSLAGLPSGIKVVSKGQPIFPRL 524


>gi|255322574|ref|ZP_05363719.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300482|gb|EET79754.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 639

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/474 (41%), Positives = 298/474 (62%), Gaps = 10/474 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  +IAD +ARF RL G D  F TGTDEHGQKI +AA   G 
Sbjct: 5   YITTPIYYVNDVPHIGHAYTTVIADTVARFARLKGDDTYFMTGTDEHGQKIEQAAAKKGY 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  FR++ D  +ISYD FIRTT+  H  T +  + K+  KGDIYKG Y G+
Sbjct: 65  TPQAYADEISAKFRELWDKFEISYDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGEYEGY 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    + +       P   ++EE YFF+LS YQD LL +YE + + I
Sbjct: 125 YCVSCESFFTQTQLL---EDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENEDCI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++NEV+SFVK GL+DLS++R +F+WGIK+P   ++P+++MYVW+DAL NYL+T GY
Sbjct: 182 VPRGKKNEVVSFVKGGLRDLSITRTSFEWGIKLPASLNEPRHVMYVWLDALINYLSTLGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D  K  +W    H++GKDILRFHA+YWPAFL+S +LPLP+ V +HG+    GEK+S
Sbjct: 242 TRGDD--KMNYWKGATHIVGKDILRFHAVYWPAFLMSLDLPLPRCVAAHGWWTRDGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P EV +  G++  RYF++RE+  G+DG + +  + +R+N++L+N +GNL+SR
Sbjct: 300 KSKGNVINPSEVADAYGLENFRYFMLREVPFGQDGDFSQKAMIERINSELSNDLGNLLSR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            V M  K  D  I          E +L   +  LQ   +N+++   +R L ++   ++  
Sbjct: 360 IVGMSEKYSDFEIKGENLRKFYGE-VLDSGNEYLQNAIKNLESFATNRYLEELFKALTLA 418

Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +      +PW L K+   D A+ ++ +   ++ ++A+LL   +P+   KI   L
Sbjct: 419 NASIAKFEPWNLMKSGKKDEANALVSLCANLLARVAVLLSPAMPRTCEKIAQTL 472


>gi|290580003|ref|YP_003484395.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996902|dbj|BAH87503.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 669

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTEKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            ++ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++K+  +GDIY
Sbjct: 61  KSEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +E+++  DG+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEIFRDEDGKVIGGIAPSGHEVEWVSEESYFLRLSNYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  +L +P+++ +
Sbjct: 241 ALLNYATALGYGQDDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLKMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G IP      T+ D  + +V +  L +  + M      
Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEIPAYVENVTDFDADLAAVVADNLAQYHKQMNAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K    R   + V+      +R +A L+Q F+   
Sbjct: 421 RALETVWNIISRTNKYIDETTPWVLAKDKAKRDDLAAVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +A +          L  G  +     PIFPR 
Sbjct: 481 SNAIMEQLGLAGQFDLEGLELAGLPTGIKVIAKGTPIFPRL 521


>gi|307704594|ref|ZP_07641498.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
 gi|307621851|gb|EFO00884.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
          Length = 665

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  +IE  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +    M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAEVAEQSIADYHTYMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
           +  +   L ++ E    ++L     P G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLS-EVASLENLSLVDFPAGVTVVAKGTPIFPRL 520


>gi|324991378|gb|EGC23311.1| methionine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 665

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ DE +       ++     M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGRVPDYEENVTDFDEDLQDCAKESIRMYHSYMNGVNYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +AL ++ +L+S  ++Y D   PW L K     ++ ++V+      +R +A L++ F+ + 
Sbjct: 421 KALEEIWTLISRTNKYIDETTPWILAKDEALRNQLASVMSHLAASLRVVAHLIKPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLGQLGLPQAASLENLAIDQLPAGMTVVEKGTPIFPRL 521


>gi|116513491|ref|YP_812397.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116092806|gb|ABJ57959.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 660

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/520 (38%), Positives = 308/520 (59%), Gaps = 16/520 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A+
Sbjct: 5   KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G 
Sbjct: 65  KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+LL
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFI P  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL 
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG++
Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLAN
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364

Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+VSMI +   G++ P      +  + + +V ++ + +   NM       AL 
Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424

Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V  L+S  ++Y D   PW L K+   +  S V+    E +R +AI++   + +   K+F
Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
             L +  E+   + L      GF           PIFPR 
Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521


>gi|325848878|ref|ZP_08170388.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480522|gb|EGC83584.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 645

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/489 (42%), Positives = 305/489 (62%), Gaps = 11/489 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI  AA
Sbjct: 2   DKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G   + FVD+ +   +D+   LDI YD FIR+T+ +H +  + +++ + DKGDIYKG
Sbjct: 62  LSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E+Y+ + ++ +G       A    V   +EE YFF+LS Y DKL   ++ 
Sbjct: 122 EYDGYYCESCESYFTESQLDEGNCPDCGRA----VDHHKEESYFFKLSKYTDKLKELFKD 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEF+ P  R+NE+++ F+  GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT 
Sbjct: 178 HPEFLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY    D  K  K+WPA +H+IGKDI+RFH I WPA L++ ++PLP+KVF+HG+IL   
Sbjct: 238 IGY--GHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDN 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN++ P  ++E  G DAL+YFL+RE   G DG +       R N+DL N +GN
Sbjct: 296 DKMSKSKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  DG+I         DE ++++C +  ++  + M +   + AL  + +L
Sbjct: 356 LLSRTVSMISKYNDGIIKKGSETDSYDEDLINLCHKTYEDFTKLMDDFKFNEALECLWNL 415

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V   ++Y D  +PW L +    +R +TVLY   E +R +A +L+  +     +I   L +
Sbjct: 416 VRRSNKYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGL 475

Query: 480 ADENRCFQS 488
             EN+ F S
Sbjct: 476 --ENKGFAS 482


>gi|223039853|ref|ZP_03610137.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878862|gb|EEF13959.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 639

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/474 (41%), Positives = 297/474 (62%), Gaps = 10/474 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  +IAD +ARF RL G D  F TGTDEHGQKI +AA   G 
Sbjct: 5   YITTPIYYVNDVPHIGHAYTTVIADTVARFARLKGDDTYFMTGTDEHGQKIEQAAAKKGY 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  FR++ D  +ISYD FIRTT+  H  T +  + K+  KGDIYKG Y G+
Sbjct: 65  TPQAYADEISAKFRELWDKFEISYDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGEYEGY 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    + +       P   ++EE YFF+LS YQD LL +YE + + I
Sbjct: 125 YCVSCESFFTQTQLL---EDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENEDCI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++NEVISFVK GL+DLS++R +F+WG+K+P   ++P+++MYVW+DAL NYL+T GY
Sbjct: 182 VPRGKKNEVISFVKGGLRDLSITRTSFEWGVKLPASLNEPKHVMYVWLDALINYLSTLGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D  K  +W    H++GKDILRFHA+YWPAFL+S +LPLP+ V +HG+    GEK+S
Sbjct: 242 TRGDD--KMNYWKGATHIVGKDILRFHAVYWPAFLMSLDLPLPRCVAAHGWWTRDGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P EV +  G++  RYF++RE+  G+DG + +  + +R+N++L+N +GNL+SR
Sbjct: 300 KSKGNVINPSEVADAYGLENFRYFMLREVPFGQDGDFSQKAMIERINSELSNDLGNLLSR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            V M  K  D  I          E +L   +  LQ   +N+++   +R L ++   ++  
Sbjct: 360 IVGMSEKYSDFEIKGENLRKFYGE-VLDSGNEYLQNAIKNLESFATNRYLEELFKALTLA 418

Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +      +PW L K    D A+ ++ +   ++ ++A+LL   +P+   KI   L
Sbjct: 419 NASIAKFEPWNLMKNGKKDEANALVSLCANLLARVAVLLSPAMPRTCEKIAQTL 472


>gi|168486199|ref|ZP_02710707.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570793|gb|EDT91321.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 665

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/522 (39%), Positives = 316/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G  V + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYYVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQTYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D+LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDSLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|253753801|ref|YP_003026942.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|251820047|emb|CAR46270.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292558559|gb|ADE31560.1| Methionyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
          Length = 667

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 21/523 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A+
Sbjct: 3   KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG+
Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             V +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   +N
Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +      EN  F      L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520


>gi|301060390|ref|ZP_07201253.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300445586|gb|EFK09488.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 642

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/515 (42%), Positives = 310/515 (60%), Gaps = 21/515 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+T I Y NA+PHIGHAY  I+ADVL RFH+L G D  F TGTDEHG KI  AA+N
Sbjct: 3   EKYYITTPIYYVNAEPHIGHAYTTIVADVLNRFHKLAGFDTFFLTGTDEHGDKIVAAAEN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T K + D+ S  F+ +   L+IS   FIRTT+  H +T R +   + +K DIY   Y
Sbjct: 63  AGQTPKQYTDRISAMFQGLWPRLNISNSAFIRTTDAYHQETVRNILSLVKEKDDIYFSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG+  + Q  P   ++E  YFFR+S YQ+ L+ + + +P
Sbjct: 123 EGLYCFGCERFYTEKEL---VDGKCPDHQKEP-DVIKEANYFFRMSRYQEWLIEHIKKNP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            FI P   RNEV+SF+   L+DL +SR      WGI +P D  ++ YVW DAL NY++  
Sbjct: 179 SFIRPERYRNEVLSFLSEPLEDLCISRPKSRLKWGITLPFDEDFVTYVWFDALINYVSAL 238

Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY   P+G+  + FWP   HVI KDIL+ H IYWP  L SA +   + +  HG+      
Sbjct: 239 GY---PEGADFQDFWPVAQHVIAKDILKPHGIYWPCMLKSAGIEPYQHLNVHGYWNIDAG 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV++P+E+++  G+D  RYFL+RE+A G D  + +D L +R+NADLAN +GNL
Sbjct: 296 KMSKSIGNVVEPLELVDIYGLDPFRYFLMREMAFGLDSEFSEDALVQRLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           VSRS++M+ K ++G +P  G  +E DE+ L   + +L EI +   NQL  H+AL  V  +
Sbjct: 356 VSRSLTMVHKYFEGALPGAGPSSEEDEA-LKNNAVLLIEIYQGHMNQLAFHKALMAVWEV 414

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +S+V++Y D   PW L K++P+R  TV+    E +R +A L+  F+P  A KI + L + 
Sbjct: 415 ISDVNKYIDRMAPWVLAKSDPERLKTVINHIFETLRIVAGLVWPFMPASAEKIQEQLGLT 474

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPI------FPR 509
            +    +  D R    + L K   PI      FPR
Sbjct: 475 HKGDQCRLTDLRT---WGLEKPTHPILKAPGLFPR 506


>gi|251771721|gb|EES52296.1| methionyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 673

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/485 (42%), Positives = 297/485 (61%), Gaps = 16/485 (3%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +R    Y++T I Y N  PHIGHAY  + ADVLAR HRL G  V F TGTDEHGQK+ 
Sbjct: 1   MSDRSPWFYLTTPIYYVNDIPHIGHAYTTVAADVLARTHRLLGEPVFFLTGTDEHGQKVW 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           ++A+  G+  +V+VD+    FR++ + L IS DDF+RTT+ RH +  R     + +KGDI
Sbjct: 61  QSAERHGLPPQVYVDRILPRFRELWEKLVISNDDFVRTTQPRHVEGVREALSLLLEKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+G Y GWY L DE ++ D +V +G   +       PV+ + E  YFFR+  YQD L+S+
Sbjct: 121 YEGAYEGWYCLPDERFWTDKDVEEGLCPEC----RRPVERISETNYFFRMGRYQDWLVSH 176

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
           YE+HPE + P  R NEV+ F++  L DL +SR      WGI +P  P Y+ YVW DAL N
Sbjct: 177 YEAHPEAVRPESRYNEVMGFLRKPLGDLCISRPKSRVPWGIPLPFAPDYVTYVWFDALLN 236

Query: 238 YLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T    L   P+   ++ WP   H++GKDIL  HA+YWP  L +  LP P+ +F+HG+ 
Sbjct: 237 YITVPRSLGPTPEEGLSRLWPGT-HIVGKDILTTHAVYWPILLRALELPPPRLIFAHGWW 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKS GNV+DP+ ++E  G DA RYFL+RE   G+D  + ++ L  R+N DLAN
Sbjct: 296 TVDGQKMSKSRGNVVDPVGLVETFGPDATRYFLLREGQFGQDVDFSREALINRINRDLAN 355

Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL+SR  +M +K + +G IP P    E    + +  +R+L E+         HRALA
Sbjct: 356 DLGNLLSRVAAMAVKFFPEGGIPRPAG--EGMREVETFAARLLPEVVSRTVALEFHRALA 413

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANK 472
            +   V  ++R  DA+ PW L + +P R+   + VLY  +E +R +A+ L  ++P  A++
Sbjct: 414 TLWEFVGFLNRTVDARAPWVLAR-DPSRSQELAEVLYDLLEGLRLVAVHLTPYLPGTADR 472

Query: 473 IFDIL 477
           IF+IL
Sbjct: 473 IFEIL 477


>gi|319758341|gb|ADV70283.1| methionyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 667

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 21/523 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A+
Sbjct: 3   KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGLTPQAYVDGMAVGVQELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG+
Sbjct: 243 NYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             V +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   +N
Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +      EN  F      L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520


>gi|56750417|ref|YP_171118.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81299951|ref|YP_400159.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|56685376|dbj|BAD78598.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168832|gb|ABB57172.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 525

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/511 (39%), Positives = 297/511 (58%), Gaps = 15/511 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N  PHIG AY  I AD +ARFHRL G  VL  TG+DEHGQKI + A+  G  
Sbjct: 7   LTTPLYYVNDVPHIGSAYTTIAADAIARFHRLQGDRVLMITGSDEHGQKIQRTAEKNGKP 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   +     F+D+  +L+I YD F RTT+ RH     + ++++  +GDIY G   GWY
Sbjct: 67  PQEHCNAIVARFQDLWQLLNIRYDRFSRTTDPRHQAIVEVFYRRVEAQGDIYVGRQQGWY 126

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +  + ++ +      +  Q   V+W +EE YFFRLS YQ+ L ++Y ++P+FI 
Sbjct: 127 CVACEEFKEERDLLEDKRCPIHTNQ--AVEWRDEENYFFRLSRYQEALEAHYAANPDFIQ 184

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RRNEV+SFV+ GL+D S+SR   +WG  +PD+P++ +YVW DAL  Y+T    L +P
Sbjct: 185 PESRRNEVLSFVERGLQDFSISRVNLEWGFAVPDNPKHTLYVWFDALLGYVTA---LLDP 241

Query: 249 DGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           D         +++WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+   G K
Sbjct: 242 DAEPTLENALSQWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFLTKDGLK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN +DP ++++  G DA+RY+ ++EI  G+DG Y +      VNADLAN +GNL+
Sbjct: 302 MGKSLGNTLDPFDLVDRFGSDAVRYYFLKEIEFGRDGDYQETRFVNVVNADLANDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  +     IP       +D  +      +   ++          A  Q+++LV 
Sbjct: 362 NRTLSMAKRYCQLQIPLGSTAIAADNPLRQQGEALTDSVKSAYDRLAFSEACGQILALVQ 421

Query: 423 EVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVA 480
             +RY D + PW   K+    +   +LY  +E +R  A  L   VP ++ +I+  L  VA
Sbjct: 422 AGNRYLDQEAPWTRFKQGEQAKVEEILYTVLESVRLAAYWLSPLVPGISQEIYRQLGLVA 481

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           D N    ++ Q+L P    H  F P   +FL
Sbjct: 482 DFND--PAIAQQLDPESHGHWGFLPAAQQFL 510


>gi|322375421|ref|ZP_08049934.1| methionine--tRNA ligase [Streptococcus sp. C300]
 gi|321279684|gb|EFX56724.1| methionine--tRNA ligase [Streptococcus sp. C300]
          Length = 665

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/521 (38%), Positives = 312/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD      +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDDHTNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M      
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMDAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520


>gi|300812080|ref|ZP_07092528.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496919|gb|EFK31993.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 660

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/520 (38%), Positives = 307/520 (59%), Gaps = 16/520 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A+
Sbjct: 5   KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G 
Sbjct: 65  KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+LL
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFI P  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL 
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG++
Sbjct: 245 NYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLAN
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364

Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+VSMI +   G++ P      +  + + +V ++ + +   NM       AL 
Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQDQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V  L+S  ++Y D   PW L K    +  S V+    E +R +AI++   + +   K+F
Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGMTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
             L +  E+   + L      GF           PIFPR 
Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521


>gi|225869045|ref|YP_002744993.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702321|emb|CAX00124.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 667

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/522 (38%), Positives = 316/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI  
Sbjct: 1   MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++ + +VD  +   + +  +LDISYD FIRTT+  H +    +++++  + DIY
Sbjct: 61  KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EVY+   G+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGTYSGWYSVSDEEFFTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++++ P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWID
Sbjct: 181 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +
Sbjct: 241 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T  D  +  V +  + E  + M+     
Sbjct: 361 ELANDLGNLLNRTVAMINKYFDGRVPAYVKNVTAFDADLEQVVADHISEYHKQMEAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++ ++V+      +R +A L+  F+   
Sbjct: 421 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIWPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  + + L + D     + LD   L  G  +    +PIFPR 
Sbjct: 481 SAAMMEQLGL-DATYHLEELDLADLPTGVTVVAKGEPIFPRL 521


>gi|313891268|ref|ZP_07824886.1| methionine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120335|gb|EFR43456.1| methionine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 668

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/526 (39%), Positives = 315/526 (59%), Gaps = 20/526 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ RL   +V + TG DEHGQKI  
Sbjct: 1   MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMNHEVFYLTGLDEHGQKIQT 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + +  +LDISYD FIRTT+  H +    +++K+  + DIY
Sbjct: 61  KAEEAGITPQTYVDGMASDVKKLWALLDISYDKFIRTTDTYHEEVVAQVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV+   +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFHDENGKVIGGTAPSGHKVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL++Y+ +P+FI P  R NE++ +F++ GL+DL++SR TF WG+K+P +P++++YVWID
Sbjct: 181 RLLAFYKENPQFIQPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+   + LP+++ 
Sbjct: 241 ALLNYATALGYGQKDSHNFEKFWNQGRVFHMVGKDILRFHSIYWPILLMMLEMKLPERLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGMFTPEDYIGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+++MI K +DG IP      T  D  + +V +  + E    M+    
Sbjct: 361 YELANDLGNLLNRTIAMINKYFDGQIPDYQAGVTHFDADLEAVVAAQIAEYHVQMEAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +++S  ++Y D   PW L K   N +  ++V+      +R +A LLQ F+ +
Sbjct: 421 PRALEAVWTIISRANKYIDETAPWLLAKEDGNKEDLASVMAHLAASLRVVAHLLQPFMME 480

Query: 469 LANKIFDIL---FVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I   L    VAD EN         + P   +     PIFPR 
Sbjct: 481 TSNAIMTQLGLEAVADLENLSLAG----IPPQTTVISKGQPIFPRL 522


>gi|223935818|ref|ZP_03627733.1| methionyl-tRNA synthetase [bacterium Ellin514]
 gi|223895419|gb|EEF61865.1| methionyl-tRNA synthetase [bacterium Ellin514]
          Length = 517

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/484 (40%), Positives = 296/484 (61%), Gaps = 22/484 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI Y N + H+GHAYEM+IADV+AR  R  G +V F TG DEHGQK+ +AAQ  G
Sbjct: 5   FYITTAIYYVNGEAHLGHAYEMVIADVIARSRRSLGTEVFFLTGLDEHGQKVQQAAQFKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ + + D+ S  +R MA  L+++ DDF+RTTE RH +  + +  K++++G  YK  Y G
Sbjct: 65  LSPQQYCDELSLIWRTMAQKLELTIDDFVRTTEPRHKEVVQAILSKLNNEGHFYKAAYKG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YS R+E +  + +  +  DG +  A +  V  ++EE Y+F+L  +Q  L+ Y ES P F
Sbjct: 125 YYSTREETFLTEKD--RLPDGNF-PASYGEVTELQEENYYFKLKDHQQWLIDYIESTPSF 181

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           I P  RRNEV+ F+K+  L+DL ++R     +WGI +P D  ++ YVW DAL NY++   
Sbjct: 182 IQPEYRRNEVLGFLKNNTLEDLCITRPINRLNWGIPVPFDTNFVTYVWFDALVNYISIPA 241

Query: 244 YLDNP--------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              +P         G     WPAD HVIGKDIL+FH++YWP  L +  LPLP+++  HG+
Sbjct: 242 AHGDPVVLSALGRTGQGLPLWPADTHVIGKDILKFHSVYWPIMLKAMGLPLPRQLLVHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SK+ GNV+DP+ V+ E G+DA R+++VRE+A G DG +   G + R  A+LA
Sbjct: 302 WQKDGQKLSKTTGNVVDPLAVVNEWGIDAFRFYVVRELAIGPDGNWTDGGFQARYQAELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG+GNLV+RS+SM+ +  +G++P      E  + +     +V+ E R +++   +  AL 
Sbjct: 362 NGLGNLVNRSLSMLKRYRNGIVP------ERSDELAPEAGKVIAETRAHLEQNGLQAALL 415

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  LV+  ++Y D   P+ L K      R   VLY   E  R LAILL  F+P  + +I
Sbjct: 416 SIWELVNRANQYVDQTAPFRLAKDPAQSKRLDEVLYNLAESCRILAILLAPFIPGTSERI 475

Query: 474 FDIL 477
           ++ L
Sbjct: 476 YNQL 479


>gi|315613349|ref|ZP_07888258.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314584|gb|EFU62627.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 679

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/522 (39%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDSMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQ+
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQN 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSISDFHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K   + D+ ++V+      +R +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A E    ++L+   L     +     PIFPR 
Sbjct: 494 SRAVLTQLGLA-EVASLENLNLADLPSDVNVVAKGTPIFPRL 534


>gi|34556660|ref|NP_906475.1| methionyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|34482374|emb|CAE09375.1| METHIONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 649

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/509 (40%), Positives = 306/509 (60%), Gaps = 12/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  +I D LA ++RL G +  F TGTDEHGQKI ++AQ  
Sbjct: 4   KSFITTPIYYVNDIPHIGHAYTTMIGDSLAHYYRLIGHETFFLTGTDEHGQKIEQSAQKK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + + D+ S  F+ + D  +ISYD FIRTT+ +H    +  + K+ +KGDIYKG Y 
Sbjct: 64  GKTPQAYADEISGAFKSLWDRFEISYDHFIRTTDAKHKQGVQKAFLKMFEKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++   ++    D  Y          ++EE YFF LS YQ+KLL++Y+ +P+
Sbjct: 124 GHYCVSCETFFTKRQL---VDDLYCPECGKETSLVKEESYFFALSRYQEKLLAWYKENPD 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT 242
            ILP  ++NEV+ FV+SGL DLS++R +FDWG+K+P +   P+++MYVW+DAL NY+T  
Sbjct: 181 CILPKPKKNEVMRFVESGLDDLSITRTSFDWGVKLPQEMNAPKHVMYVWLDALLNYVTAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  FWPA +H++GKDILRFHAIYWPAFL+S +LPLPK V +HG+    G K
Sbjct: 241 GYGD--DEKRMDFWPARVHLVGKDILRFHAIYWPAFLMSLDLPLPKHVAAHGWWTRNGAK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVI+P EV +  GV+  RYF++RE+  G+DG + +  L  R+N+DL+N +GNL+
Sbjct: 299 MSKSVGNVINPQEVADAYGVEPFRYFMLREVPFGQDGDFSQKALIDRLNSDLSNDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M  K +D  I T    T      L     +L  +   +Q    HR L ++  + +
Sbjct: 359 NRLGGMSGKYFDYQI-TSKEVTTFHAKELQEAELILDSLHGYIQEMQPHRYLEELWKIFT 417

Query: 423 EVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +      +PW+L K   + +A  ++ +   ++ +  ++L   +PK A KI   L +  
Sbjct: 418 IANTAIAMHEPWKLMKEGKESQAMALVALIANLLAKATLMLSPIMPKSAAKIAQALNLEI 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++ L   ++   +   TF P  P F
Sbjct: 478 STASYERL--IIQKALLEEFTFTPTPPLF 504


>gi|325684670|gb|EGD26824.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 673

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/517 (38%), Positives = 308/517 (59%), Gaps = 10/517 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A+
Sbjct: 18  KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKSRGYDTFFLTGTDEHGLKIEQKAE 77

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G 
Sbjct: 78  KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 137

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+LL
Sbjct: 138 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 197

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFI P  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL 
Sbjct: 198 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 257

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG++
Sbjct: 258 NYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 317

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLAN
Sbjct: 318 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 377

Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+VSMI +   G++ P      +  + + +V ++ + +   NM       AL 
Sbjct: 378 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 437

Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V  L+S  ++Y D   PW L K+   +  S V+    E +R +AI++   + +   ++F
Sbjct: 438 SVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGRMF 497

Query: 475 DILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             L +  E+   + L       G  +     PIFPR 
Sbjct: 498 AQLGLDWEDESQKDLQFGGFAWGVNVVAKPTPIFPRL 534


>gi|225869985|ref|YP_002745932.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699389|emb|CAW92834.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 667

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI  
Sbjct: 1   MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMLGYDVFYLTGLDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++ + +VD  +   + +  +LDISYD FIRTT   H +    +++++  + DIY
Sbjct: 61  KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTGDYHEEVVAAVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EVY+   G+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGTYSGWYSVSDEEFFTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++++ P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +
Sbjct: 241 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T  D  +  V +  + E  + M+     
Sbjct: 361 ELANDLGNLLNRTVAMINKYFDGRVPAYVRNVTAFDADLEQVVADHISEYHKQMEAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++ ++V+      +R +A L+Q F+   
Sbjct: 421 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  I + L +  +    +     L  G  +    +PIFPR 
Sbjct: 481 SAAIMEQLGLGAKYHLEELDLADLPTGVTVVAKGEPIFPRL 521


>gi|313123059|ref|YP_004033318.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279622|gb|ADQ60341.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 660

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/520 (38%), Positives = 308/520 (59%), Gaps = 16/520 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A+
Sbjct: 5   KKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G 
Sbjct: 65  KLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLGE 124

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+LL
Sbjct: 125 YTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRLL 184

Query: 178 SYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            YY+ HPEFI P  R  E+++ F+K GL+DLS++R T DWGI +P DP++++YVWIDAL 
Sbjct: 185 QYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDALA 244

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG++
Sbjct: 245 NYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGWV 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLAN
Sbjct: 305 LIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLAN 364

Query: 357 GIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+VSMI +   G++ P      +  + + +V ++ + +   NM       AL 
Sbjct: 365 DLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNALE 424

Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V  L+S  ++Y D   PW L K+   +  S V+    E +R +AI++   + +   K+F
Sbjct: 425 NVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKMF 484

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
             L +  E+   + L      GF           PIFPR 
Sbjct: 485 AQLGLDWEDESQKDLQFG---GFAWDVNVVAKPTPIFPRL 521


>gi|331701956|ref|YP_004398915.1| methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129299|gb|AEB73852.1| Methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 675

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/519 (39%), Positives = 309/519 (59%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D  ARF R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGKLHIGNSYTTIACDAEARFKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ K +VDQ + + + +   L+IS   FIRTT+  H      +++K+ D GDIY 
Sbjct: 63  AEQLGMSPKDYVDQMAASIKQLWKKLEISNTKFIRTTDDYHEKAVADIFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDKNGKVTGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YY+ +P FI P  R NE+I +F++ GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LLRYYKDNPNFIQPATRMNEMIKNFIEPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           LTNY+T  GY    D +  K+WPA++ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LTNYITALGYDGKDDSNFKKYWPANVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    R+N DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLLRAMPYANDGLFTPEDFIDRLNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G++P       E+D+ +    + V+   ++ M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYDGGILPAYKAGVNEADKELEETAATVIANYKQLMNDLHFSDA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           LA+   LVS+ ++Y D  +PW L K NP   D+   V+      +R +A L+   +    
Sbjct: 423 LAETWKLVSQTNKYIDQTEPWNLAK-NPDDKDKLDAVMAHLAAGLRVIAELISPVMTHAP 481

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +IF  L + ++        + +  G        PIFPR
Sbjct: 482 KEIFAQLGITEDIDLEDLKFEDVPAGVKAVAKGTPIFPR 520


>gi|195977657|ref|YP_002122901.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974362|gb|ACG61888.1| methionyl-tRNA synthetase MetG [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 672

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/522 (38%), Positives = 316/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI  
Sbjct: 6   MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQD 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++ + +VD  +   + +  +LDISYD FIRTT+  H +    +++++  + DIY
Sbjct: 66  KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIY 125

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    E+Y+   G+         + V+W+ EE YF RLS Y D
Sbjct: 126 LGTYSGWYSVSDEEFFTESQLAEIYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 185

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++++ P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWID
Sbjct: 186 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWID 245

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +
Sbjct: 246 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 305

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 306 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 365

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T  D  +  V +  + E  + M+     
Sbjct: 366 ELANDLGNLLNRTVAMINKYFDGRVPAYVKNVTAFDADLEQVVADHISEYHKQMEAVDYP 425

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++ ++V+      +R +A L+  F+   
Sbjct: 426 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIWPFMMTT 485

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  + + L + D     + LD   L  G  +    +PIFPR 
Sbjct: 486 SAAMMEQLGL-DATYHLEELDLADLPTGVTVVAKGEPIFPRL 526


>gi|223933652|ref|ZP_03625630.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330833043|ref|YP_004401868.1| methionyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223897682|gb|EEF64065.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329307266|gb|AEB81682.1| methionyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 667

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 317/523 (60%), Gaps = 21/523 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A+
Sbjct: 3   KTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFFNAHPDFIQPDGRMNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP  + +HG+
Sbjct: 243 NYATALGYGQEETINYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDLLVAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFSGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             V +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   +N
Sbjct: 423 EAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +      EN  F      L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 520


>gi|220928528|ref|YP_002505437.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998856|gb|ACL75457.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 654

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/471 (41%), Positives = 298/471 (63%), Gaps = 9/471 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAY +++PHIG+ +E+++AD  ARF R+ G DV F TGTDEHGQKI   A+ AG+
Sbjct: 7   YLTTAIAYTSSKPHIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKAKEAGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K +VD  ++  + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG Y G 
Sbjct: 67  SPKEYVDGFAKEIQRICDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYEQGDIYKGYYEGM 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    EA++   ++  G         H P +   EE YF +LS Y D+L+ +   HPEFI
Sbjct: 127 YCTPCEAFFTSSQLVDGKCPDCGRECH-PAK---EEAYFLKLSKYADRLIQHINEHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL- 245
            P  R+NE+++ F+ +GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  G+  
Sbjct: 183 QPESRKNEMMNNFLLAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYITGLGFDA 242

Query: 246 -DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N D    KFWPADLH+IGKDILRFH IYWP  L++  +PLPK+VF H ++L    K+S
Sbjct: 243 DGNSDEMFNKFWPADLHLIGKDILRFHTIYWPIMLMALEVPLPKQVFGHPWLLMGNGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI   E+++  GVDA+RY+++ ++    DG    + + +R+N+DLAN +GNLV+R
Sbjct: 303 KSKGNVIYADELVDIFGVDAVRYYILHDMPFDNDGVISWELITERINSDLANVLGNLVNR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            ++M  K + G++       + D  ++ +  +  + + E M    +  AL+++ +L    
Sbjct: 363 VIAMTNKYFSGVVNNSNVREDIDNELIELTLKTPETVVEKMDKLRVADALSEIFTLFKRC 422

Query: 425 DRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++Y D   PW L K    +A   TVLY  VE I   A LL+AF+P+ A KI
Sbjct: 423 NKYIDETMPWILAKDEAKKARLETVLYNLVEGIVTGASLLEAFMPETAQKI 473


>gi|33303701|gb|AAP22258.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 397

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/397 (46%), Positives = 276/397 (69%), Gaps = 10/397 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DISYDD
Sbjct: 2   MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 61

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKG---AD 146
           FIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y +    D + +G     
Sbjct: 62  FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 121

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLK 205
           G+  +  H+ V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+ F+K GL+
Sbjct: 122 GKSPDRGHD-VELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 180

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H++GK
Sbjct: 181 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 240

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+DAL
Sbjct: 241 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 300

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFT 384
           RY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP      T
Sbjct: 301 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKENVT 360

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           E DE++++     L+++ E M+N     AL+ +  LV
Sbjct: 361 EFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLV 397


>gi|220908709|ref|YP_002484020.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219865320|gb|ACL45659.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 531

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/505 (40%), Positives = 297/505 (58%), Gaps = 10/505 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +R+   ++T + Y N  PH+G AY  I ADV+ARF+RL G  VL  TGTDEHGQKI +
Sbjct: 3   INKRKTFALTTPLYYVNDLPHMGSAYTTIAADVIARFYRLQGEAVLLITGTDEHGQKIQR 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +   DQ    F ++   L+I+YD F RTT+ RH    +  + ++ ++GDIY
Sbjct: 63  TAERLGRTPQEHCDQVVNGFVELWQKLNITYDRFSRTTDPRHAVIVQEFFHRLWERGDIY 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G   GWY +  E +  + E+ K  D       H   +W +E+ YFFRLS YQD LL YY
Sbjct: 123 LGQQQGWYCVDCEEFKEERELLK--DHYCPIHIHRQAEWRDEQNYFFRLSHYQDILLDYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HPEFI P  RRNEV+SFV+ GLKD S+SR   DWG  +P DP++ +YVW DAL  Y+T
Sbjct: 181 NKHPEFIQPESRRNEVLSFVERGLKDFSISRVNMDWGFPVPVDPRHTLYVWFDALLGYVT 240

Query: 241 T---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                G     D +  ++WP +LH+IGKDILRFH I WPA LLSA LPLP +VF HGF+ 
Sbjct: 241 ALLEPGEEPGLDRALQQWWPINLHLIGKDILRFHTISWPAMLLSAGLPLPDRVFVHGFLT 300

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+ KSLGN +DP+++++  G +A+RY+ ++EI  G+DG + +      +NADLA+ 
Sbjct: 301 KDGQKMGKSLGNTLDPVDLVDRFGAEAVRYYFIKEIEFGRDGDFSEPRFINILNADLADD 360

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R++ M  K   G IPT  A +  +D  + ++   V + + ++       +A   
Sbjct: 361 LGNLLNRTLKMAFKYCQGQIPTGTADSLPADHPLQALGQSVGERVAQSYAELDFTQACEI 420

Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + LV + +++ D Q PW L K+    + + +LY  +E +R  A LL   +P +A +I+ 
Sbjct: 421 ALELVRKGNKFVDEQAPWSLYKQGQYQQVNQILYSVLESVRLAAYLLSPIIPAIATEIYY 480

Query: 476 ILFVADENRCFQSLDQRLKPGFMLH 500
            L   D    F   D    P +  H
Sbjct: 481 QLGFDD---SFNHQDYSTLPAYAAH 502


>gi|149195308|ref|ZP_01872396.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134572|gb|EDM23060.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/515 (40%), Positives = 310/515 (60%), Gaps = 26/515 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PHIGHAY  IIAD +AR+ RL G+D  F TGTDEHGQKI +AA+  G 
Sbjct: 9   YLTTPIYYVNDVPHIGHAYTTIIADTIARYSRLKGIDTFFLTGTDEHGQKIEEAARKKGK 68

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K + D+ S  F+++ D  +ISYD FIRTT++ H    +  + ++  KGDIYK  Y G 
Sbjct: 69  SPKEYADEISAKFKELWDEFEISYDKFIRTTDEAHKRGVQKAFLEMYKKGDIYKDYYEGH 128

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E++    ++    + +       P + ++EE YFFRLS YQDK+L + ++    I
Sbjct: 129 YCVSCESFIAPSQL---VNDELCPDCGKPTRIIKEESYFFRLSKYQDKILDWLKNKKP-I 184

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  + NEVI FV+ GLKDLS++R +F+WG+K+PD   D ++++YVW+DAL NYLT  GY
Sbjct: 185 LPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPDEINDKKHVVYVWLDALFNYLTALGY 244

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               +    K+WPA LH++GKDIL+FHA+YWPAFL+S    LPKK+ +HG+    GEK+S
Sbjct: 245 GSEDESLVKKYWPAKLHIVGKDILKFHAVYWPAFLMSIGYELPKKIAAHGWWTRDGEKMS 304

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVIDP EV +  G++  RYFL+RE+  G DG + +  L  R+N DL N +GNL++R
Sbjct: 305 KSKGNVIDPKEVADAYGIENFRYFLLREVPFGADGDFSEKALIDRINNDLGNDLGNLLNR 364

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--------QLIHRALAQ 416
            + M  K +DG +        +   +    S  L E RE ++N          IH+ L +
Sbjct: 365 IIGMAYKYFDGKV--------TSRDVEKYFSSELNEAREIIKNLEETYLWKMQIHKFLEE 416

Query: 417 VISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  ++S  ++  D  KPWEL K     +A+ ++ +   ++   +I L A +PK   KI  
Sbjct: 417 LWKVLSIGNKAIDTYKPWELMKNGETQKAAALIGLIANLLALTSINLHAVMPKTTQKIAS 476

Query: 476 IL-FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            L F  + N   + ++ +L   F++ K   P+FP+
Sbjct: 477 SLGFEINPNSFNELMEGKLLDDFVIEK-IPPLFPK 510


>gi|269216114|ref|ZP_06159968.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130373|gb|EEZ61451.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 526

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/514 (39%), Positives = 294/514 (57%), Gaps = 14/514 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
            +T I Y NA PH+G AY  + AD +AR+ R++G DV F TG DEHGQK+A+ A+  G+T
Sbjct: 8   FTTPIYYVNAAPHLGTAYTTVAADAVARYQRMNGHDVAFVTGLDEHGQKVAETAEKHGMT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + + D     F D   +LDI++ DF+RT+  R   T +  W  + +KG +YKG Y GWY
Sbjct: 68  PQEWCDSMVPAFMDAWKMLDIAFTDFVRTSSDRQTRTVQTFWNDLYEKGYLYKGAYEGWY 127

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWME--EEGYFFRLSAYQDKLLSYYESHPE 185
            + +E YY + ++     G +       PV+ M   EE +FF+LS +QD+LL +YE+HP+
Sbjct: 128 CVHEETYYAESDLETDDAGAFICPDCKRPVRRMSSGEENWFFKLSEFQDRLLEFYEAHPD 187

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV++FVK GL+DLS+SR TFDWGI +  D  ++ YVW DAL  YLT  GY 
Sbjct: 188 FIRPETRRNEVVAFVKGGLQDLSISRSTFDWGIPLTFDEGHVCYVWADALLAYLTGIGYA 247

Query: 246 DNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           D PD  G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF++  GEK+
Sbjct: 248 D-PDRPGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPVTHTVFGHGFLMVGGEKM 306

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN I P +++   G DA RY+ + ++  G DG    + + +  NADLAN  GNL S
Sbjct: 307 SKSKGNGIRPADLVSVYGSDAYRYYFLSDVRFGADGNVSVERMTQVYNADLANTWGNLCS 366

Query: 364 RSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  +M+ K +DG +P  P  FT  +  +  +   + +     M +     A A V  L S
Sbjct: 367 RVFNMVGKYFDGTVPQVPSGFTHVENPLRDIADGLYETFDSCMADVNFTDACAAVQELAS 426

Query: 423 EVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            V+ Y +   PW L K+       + VLY  +E  R LA+    F+P+ + ++F  L + 
Sbjct: 427 RVNLYVEQSAPWNLAKSEETAGELAFVLYNALEACRILALYFAPFMPRTSAEVFRRLGLG 486

Query: 481 D----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D    ++    +   +L  G  + K  DP+FPR 
Sbjct: 487 DIAAVDDIEAATAWGQLPAGNEVEKG-DPLFPRL 519


>gi|170079299|ref|YP_001735937.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169886968|gb|ACB00682.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 530

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/490 (41%), Positives = 284/490 (57%), Gaps = 8/490 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    +  ++T + Y N  PHIG AY  ++AD +ARFHRL G DVLF TGTDEHGQKI +
Sbjct: 1   MTSPVRFALTTPLYYVNDVPHIGSAYTTMVADAIARFHRLKGDDVLFITGTDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  GV  +V  D+   +F+D+    +I YD F RTT   H       ++++ D GDIY
Sbjct: 61  TAQEKGVDPQVHCDEIIGSFKDLWQHYNIQYDRFSRTTAPNHAKIVAEFFQRVWDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY +  E +  + ++ K      +  +    +W +EE YFFRLS YQ +L + Y
Sbjct: 121 LAQQQGWYCVACEEFKEEKDLIKDHHCAIHTNKQ--AEWRDEENYFFRLSKYQAQLEALY 178

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P+FI P  RRNEVI+FVK GL+D S+SR   DWG  +P D  + +YVW DAL  Y+T
Sbjct: 179 SDNPDFIQPASRRNEVINFVKQGLQDFSISRVNLDWGFPVPTDENHTIYVWFDALLGYVT 238

Query: 241 TT---GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                G     + +  K+WP +LH+IGKDILRFHA+YWPA L+SANLPLP KVF HGF+ 
Sbjct: 239 ALLEDGEAATLENALKKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPDKVFGHGFLT 298

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN IDPI ++ + G DALRY+ ++E+  GKDG +++      VNADLAN 
Sbjct: 299 KNGLKMGKSLGNTIDPIALVNQYGADALRYYFLKEVELGKDGDFNETRFVNVVNADLAND 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
           +GNL++R++ M+ K     IP     T   +  L      L +      + L    A  Q
Sbjct: 359 LGNLLNRTLGMLKKYCKSEIPNLDLGTIPVDHPLKALGETLGDRTCAAYDNLNFTAACQQ 418

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           V++L+   ++Y D + PW L K     +   +L   +E +R  A LL   +P L+N+I+ 
Sbjct: 419 VLALIQASNKYIDDRAPWALFKAGEQAQVEEILLTILESVRLAAYLLSPVIPNLSNQIYR 478

Query: 476 IL-FVADENR 484
            L F  D NR
Sbjct: 479 QLGFPGDFNR 488


>gi|168702118|ref|ZP_02734395.1| Methionyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 531

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/477 (40%), Positives = 306/477 (64%), Gaps = 7/477 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ + + +TAI YPN++PHIG A+E + ADV AR+ R++G DV F  G DE+  K+A 
Sbjct: 1   MTDKPRWFQTTAIDYPNSRPHIGTAFEKLGADVQARYRRMEGYDVFFLMGNDENTLKVAD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G   + + D  +R FR++ D LDISYD F++T+ +RH   CR   +K+ D G IY
Sbjct: 61  RAKSLGQEPQAYCDDMARQFREVWDALDISYDTFVQTSHERHKQCCRKFVQKVYDNGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E +   D+V+  + G   N +  P+    E  +FF+LSA++D+LL + 
Sbjct: 121 KGSYEGWYCPGCEEF-KSDKVHAESGGLCPNHKR-PLVRRSEPCWFFKLSAFKDRLLEHL 178

Query: 181 ESHPEFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + +PEF+ P  RRNE+I F+++ GL+DL++SR   +WGIK+P DP++ +YVW DAL  Y+
Sbjct: 179 KGNPEFVQPESRRNEMIGFIEAEGLQDLNISRHGEEWGIKLPFDPEFTIYVWFDALLTYI 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY D+ + +  K WPAD+H IGKDI RFH   WPA L +A    P+KVFSHGF+ + 
Sbjct: 239 TGIGYGDD-EATFRKHWPADVHFIGKDITRFHTHIWPAMLWAAGEEAPRKVFSHGFVNNN 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+ K+LGN++DP+E+I +   DA RY+ +RE     DG Y     ++  N++LAN +G
Sbjct: 298 GQKMGKTLGNIVDPMEIIAKSNADAYRYYFMRECPFPSDGDYSGQRYEEVYNSELANNLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVI 418
           N++SR +++  K+++G+  T  A    D  +  +  ++ + E+RE+++    + AL +++
Sbjct: 358 NMLSRELTITFKNFEGVF-TGTAGVTPDPVVPGLDLKLFVGEVREHVEACRYNLALQKIV 416

Query: 419 S-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++  ++Y +A  PW+L KT+ D A  VL+  V+ +R  +ILL+ F+PK A  I+
Sbjct: 417 QDFLTPTNQYLEANAPWKLVKTDKDAAKKVLFNAVQSLRIASILLKPFIPKSAEAIY 473


>gi|323342276|ref|ZP_08082508.1| methionine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463388|gb|EFY08582.1| methionine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 644

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/495 (39%), Positives = 312/495 (63%), Gaps = 15/495 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  YI+TAIAY +A+PHIG+ YE+++AD +ARF R  G +V F TGTDEHGQKI  
Sbjct: 1   MKNNKNYYITTAIAYTSAKPHIGNIYEIVLADSIARFKRAQGYNVRFQTGTDEHGQKIED 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   +  K +VD  S   R + D++++ YD FIRTT+  H +  + ++KK+ D+GD+Y
Sbjct: 61  NAKEHNMLPKDYVDNISGVIRGLFDLMNVKYDYFIRTTDDYHKEQVQKVFKKLFDQGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E++Y+D +V    + +        V   +E  YFF++S YQ++L+ Y 
Sbjct: 121 KGNYEGWYCKSCESFYSDSQV----EDETCPECGGKVVRQQESCYFFKMSNYQERLVQYI 176

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + +P FI P  R+NE++ +F+K  L DL++SR +F WGI +  DP++++YVWIDAL NY+
Sbjct: 177 KDNPSFIQPESRKNEMLQNFLKEDLYDLAVSRTSFKWGIPVDFDPEHVVYVWIDALINYI 236

Query: 240 TTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  GY  + DG+      +FWPAD+H+IGKDILRFH IYWP  L++ ++ LPK++F H +
Sbjct: 237 TGLGY--DVDGNNGPLFDEFWPADVHLIGKDILRFHTIYWPILLMALDIELPKQIFGHPW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L    K+SKS GN +   ++   +GVD +RY ++ E+   +DG    + + +R+N DLA
Sbjct: 295 LLTGDSKMSKSKGNAVYVDDLTSVLGVDPVRYIMLHEMPFERDGHLTYELMIERINTDLA 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N IGNLV+R++SM  K +DG++       + D+ +++ C  ++  +   M    +  A++
Sbjct: 355 NIIGNLVNRTISMTNKYFDGVLTVNHVDDDMDDELIAACKNLIPNVEAKMDTLHVADAIS 414

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++++L  + ++Y D  +PW L K  T  +R  TVLY   E+IR   I L++F+P+ + +I
Sbjct: 415 EIVALFRKGNKYIDDTQPWVLAKDETKQERLQTVLYNLTELIRIGGIALESFIPETSQRI 474

Query: 474 FDILFVADENRCFQS 488
              L    E+  F+S
Sbjct: 475 LAQL--QTEHTSFES 487


>gi|302336214|ref|YP_003801421.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320054|gb|ADK68541.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 534

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/497 (39%), Positives = 295/497 (59%), Gaps = 18/497 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   +I+T I Y NA+PH+G AY  ++ DV AR+ R  GLDV F TG DEHG+K+ +AA+
Sbjct: 3   KTPFFITTPIYYVNARPHLGTAYTTVLCDVQARYRRATGLDVRFLTGMDEHGEKVEEAAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G+  + + D  +  F D+   L+IS DDFIRTTE R     + LW+++ + G +YKG 
Sbjct: 63  SHGMDPQEWCDSQAPFFEDLWQTLEISNDDFIRTTEARQTRAVQYLWERMRESGYLYKGT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWY + DE Y+ + +V    + +    QH       P++ ++EE YFFRLSA+QD+LL
Sbjct: 123 YDGWYCVPDETYFTETQVSHADEERGTQGQHLCPDCGRPLERVQEESYFFRLSAFQDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
             Y+ HP+F++P  R  EV SFV+ GL+DLS+SR +FDWGI +P D +++ YVW DAL N
Sbjct: 183 RLYDEHPDFVMPDFRMREVRSFVEGGLQDLSVSRTSFDWGIPVPFDDRHVTYVWFDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           Y+T  G+    D + A+F   WPA  H++GKDI+RFH + WPA L++    LP+ VF+HG
Sbjct: 243 YMTAVGFGQGTDEAAAEFARRWPAQYHMVGKDIIRFHCVIWPAMLMAIGEALPEHVFAHG 302

Query: 295 FILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           F++ K      GEK+SKS GN I P EVI+ +GV+  RY+ + +   G+DG      +++
Sbjct: 303 FLMVKNEETGQGEKMSKSRGNAIAPEEVIDLLGVEGYRYYFMTDCVPGEDGAISFSRMEQ 362

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQN 407
             NADLAN  GNLVSRS++M  K +DG  P     ++E    +  +   +     E+M  
Sbjct: 363 VYNADLANSWGNLVSRSLNMSAKYFDGKTPQLADGWSERPNPLCDIAQGIFGRYAEHMDK 422

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAF 465
                A   V+ LV   + Y +   PW + K    R   + ++   +E IR  A LL  F
Sbjct: 423 IEYVAAKDVVMELVHAANHYIEDSAPWTVAKDPARREELAGIICSLLESIRICAHLLSPF 482

Query: 466 VPKLANKIFDILFVADE 482
           +P+ + ++   + + DE
Sbjct: 483 MPQTSAEVLRRMSLGDE 499


>gi|94987979|ref|YP_596080.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991861|ref|YP_599960.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94541487|gb|ABF31536.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545369|gb|ABF35416.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Streptococcus pyogenes MGAS2096]
          Length = 666

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/518 (38%), Positives = 314/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P +R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDDRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D+LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDSLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|258614579|ref|ZP_05712349.1| methionyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 413

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/402 (45%), Positives = 269/402 (66%), Gaps = 7/402 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+ F+K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           LAN +GNL++R+++MI K  DG++P   +     +S LS  +
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTA 402


>gi|222823730|ref|YP_002575304.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538952|gb|ACM64053.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 629

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/491 (42%), Positives = 300/491 (61%), Gaps = 21/491 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N   HIGHAY  IIAD LARF+RL G    F TGTDEHGQKI +AA     
Sbjct: 3   YITTPIYYVNDVAHIGHAYTTIIADTLARFYRLQGEKTFFLTGTDEHGQKIEQAASAKNF 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K + D+ S  F+ + D  +ISYD FIRTT++ H  + +  +KK+ DKGDIYKG Y G+
Sbjct: 63  TPKEYADEISTKFKKLWDEFEISYDYFIRTTDENHKLSVQKAFKKMFDKGDIYKGTYEGF 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y +  E+Y+           Q  N  H P      Q ++EE YFF+LS YQD++L +Y+ 
Sbjct: 123 YCVSCESYF--------TQTQLINECHCPDCGKKTQLLKEESYFFKLSKYQDQILKWYKE 174

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYL 239
             E ILP  + NE+I+FV+SGLKDLS++R +F+WGIK+P   +D ++++YVW+DAL NY+
Sbjct: 175 K-EPILPKNKANELINFVESGLKDLSITRTSFEWGIKLPKELNDDKHVVYVWLDALMNYV 233

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  G+ +  D +   FWPA +H +GKDILRFHA+YWPAFL+S +LPLPK + +HG+    
Sbjct: 234 SALGWGN--DEANMDFWPAHIHFVGKDILRFHAVYWPAFLMSLDLPLPKFIAAHGWWTKD 291

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNV+ P EV +  G++A RYFL+RE+  G DG + +  L  R+NA+L+N +G
Sbjct: 292 GEKMSKSKGNVVAPKEVADTFGLEAFRYFLLREVPFGNDGDFSQKALIARINAELSNELG 351

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R + M  K    +I         ++  L+ C   L      ++N   +R L ++  
Sbjct: 352 NLLNRIIGMSAKYSQNIIDCKDVNLYFNQE-LNECKEYLDNAINALENIQPNRYLEELFK 410

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +S  +      +PW L K +   +A+ ++ +   ++ ++AILL A +P  A KI   L 
Sbjct: 411 ALSLANLSISKYEPWNLIKNDQMQKANALVALCANILAKVAILLSAAMPNTALKIAKALN 470

Query: 479 VADENRCFQSL 489
               N  +Q L
Sbjct: 471 FEISNENYQKL 481


>gi|329115819|ref|ZP_08244536.1| methionine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906224|gb|EGE53138.1| methionine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 668

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/525 (37%), Positives = 317/525 (60%), Gaps = 19/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ RL   +V + TG DEHGQKI  
Sbjct: 1   MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMNHEVFYLTGLDEHGQKIQT 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H +    +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAEGVKELWSLLDISYDKFIRTTDSYHEEVVAAVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++   G          + V+W+ EE YF RL  Y D
Sbjct: 121 LGQYSGWYSVSDEEFFTESQLEEVFRDESGNVTGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++  HPEFI P  R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVWID
Sbjct: 181 RLVAFFNEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++PLP+++ +
Sbjct: 241 ALLNYATALGYGQENHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMPLPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+++MI K + G +P+     TE D  +  +    + +  + M      
Sbjct: 361 ELANDLGNLLNRTIAMINKYFGGQVPSYVENVTEFDLDLAYLVEEKIADYHKQMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V S++S  ++Y D   PW L K + D+   ++V+      +R +A L+Q F+ + 
Sbjct: 421 RALDAVWSIISRANKYIDETAPWVLAKEDGDKEQLASVMAHLAASLRVVAHLIQPFMIET 480

Query: 470 ANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I   L ++     EN    ++ + ++    +     PIFPR 
Sbjct: 481 SNAIMTQLGLSIDFDLENLTLANMPENIQ----VITKGQPIFPRL 521


>gi|325695003|gb|EGD36907.1| methionine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 664

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/521 (38%), Positives = 316/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +V+  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGISPQAYVNGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSM+ K +DG IP      T+ D ++  V ++ + +   +M      
Sbjct: 360 ELANDLGNLLNRTVSMVNKYFDGQIPVYEENVTDFDGALAQVAAQSIADYYRHMDAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V  L+S  ++Y D   PW L K     ++ ++V+      +R +A +++ F+ + 
Sbjct: 420 RALEAVWMLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 480 SKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 520


>gi|322392166|ref|ZP_08065628.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145066|gb|EFX40465.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 665

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/525 (39%), Positives = 315/525 (60%), Gaps = 20/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQIFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVW D
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVQVPSNPRHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 240 ALLNYVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVIYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D  +  V  + + +    M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNELAQVAEQSISDYHTYMEAVNYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
           +  +   L +A+      SL+      F  + T      PIFPR 
Sbjct: 480 SRAVLTQLGLAE----VSSLENLSLADFPANVTVVAKGTPIFPRL 520


>gi|289167689|ref|YP_003445958.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907256|emb|CBJ22091.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 665

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/522 (38%), Positives = 317/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D ++  V +  + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNALAQVAAESIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L + +E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVASLENLKLADFPADVTVVAKGTPIFPRL 520


>gi|282863863|ref|ZP_06272921.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561564|gb|EFB67108.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 534

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/477 (41%), Positives = 292/477 (61%), Gaps = 8/477 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   V
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANDV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DK  IYKG Y G
Sbjct: 75  TPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKDQIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            Y +  E Y    ++ +  DG      H  PV+ ++EE YFF+LS Y  KLL +YE++P 
Sbjct: 135 PYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVEILKEENYFFKLSEYGPKLLEFYEANPG 194

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P   RNE+++FVK GL+DLS+SR TFDWG+ +P DP++++YVWIDAL NY T  GY 
Sbjct: 195 FIQPESARNEIVNFVKQGLQDLSISRSTFDWGVPVPWDPKHVIYVWIDALLNYATAVGYG 254

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +   + F PAD+H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GEK+SK
Sbjct: 255 ANQEKFDSTF-PADVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGEKMSK 313

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S    I P ++    GVDA R++ +R IA G DG +  +    R  ++LAN  GNL SR 
Sbjct: 314 SNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLASRL 373

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
            +M+ K + G +P   A  E+++++    +R +    E +  +L     +  +   V +V
Sbjct: 374 AAMVGKYFGGALPEATAAGEAEQAVREGLARAVATADEKIGEELDFQGGILAIFDFVKQV 433

Query: 425 DRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + Y   Q+PW++ K        R +T+LY   E +R +A+LL A +P+ + K+++ L
Sbjct: 434 NGYITEQEPWKVAKDESSEGQARLATILYTAAEALRGVAVLLNAVMPETSQKLWESL 490


>gi|302552805|ref|ZP_07305147.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470423|gb|EFL33516.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 538

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/524 (39%), Positives = 316/524 (60%), Gaps = 27/524 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+  GV
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + + + D+  +  ++ + + L+I+ DDFIRTT+KRH D  +   + + DKG+IYKG Y G
Sbjct: 75  SPQEWADKLVTEAWKPLWEHLEIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    E+  G +G+Y   +       PV+ + EE YFF+LS Y DKLL++YE
Sbjct: 135 PYCVGCEEYKLPGELLDG-EGEYAGQKLCPIHKKPVEILSEENYFFKLSEYGDKLLAHYE 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDAKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY +N    +AKF   +PAD+H++GKDILRFHA+ WPA L++  LPLP K+ ++G+++ 
Sbjct: 254 VGYNEN----QAKFEETFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKIAANGWLMV 309

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  
Sbjct: 310 GGEKMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDY 369

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           GNL SR  +M+ K + G +P   A  E++++I    ++ + E    + + L     +  +
Sbjct: 370 GNLASRVAAMVGKYFGGELPESTADGEAEKAIHEGLAKAVAEADRRIGDDLDFQGGILAI 429

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              V +V+ Y   Q+PW++ K   +    R +T+LY   E +R +A+LL   +P+ + K+
Sbjct: 430 FDFVKQVNGYITEQEPWKVAKDTSEEGKARLATILYTAAESLRAIAVLLNPVMPETSQKL 489

Query: 474 FDIL-------FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +D L        +AD+     +   RL  G  + K    +FPR 
Sbjct: 490 WDSLGAEASLGALADQTVQQSAEWGRLPAGTTVTKG-AVLFPRL 532


>gi|297193195|ref|ZP_06910593.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720465|gb|EDY64373.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 525

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/478 (41%), Positives = 299/478 (62%), Gaps = 14/478 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+  GV
Sbjct: 5   YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANGV 64

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG Y G
Sbjct: 65  TPQEWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            Y +  E Y    ++ +  DG      H  PV+ ++EE YFF+LS Y  KLL +Y ++P+
Sbjct: 125 PYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVEILKEENYFFKLSEYGPKLLDFYAANPD 184

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P   RNEV++FVK GL+DLS+SR TFDWG+ +P D ++++YVWIDAL NY T  GY 
Sbjct: 185 FIQPESARNEVVNFVKQGLQDLSISRSTFDWGVPVPWDEKHVIYVWIDALLNYATAVGYG 244

Query: 246 DNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            N    +AKF   +PA++H++GKDILRFHAI WPA L++  LP+P KV ++G+++  GEK
Sbjct: 245 SN----QAKFDETFPANVHLVGKDILRFHAIIWPAMLMAQGLPVPGKVAANGWLMVGGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL 
Sbjct: 301 MSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFTARYTSELANDYGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
           SR  +M+ K ++G +P   A  E+++++    ++ + E    +  +L     +  V   V
Sbjct: 361 SRVAAMVGKYFEGALPAATAAGEAEQAVQDGLAKAVAEADRKIGEELDFQSGILSVFEFV 420

Query: 422 SEVDRYFDAQKPWELKKTN-PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +V+ Y   Q+PW++ K + P+   R +T+LY   E +R +A+LL   +P+ + K++D
Sbjct: 421 KQVNGYITEQEPWKVAKDDSPEGRARLATILYTAAESLRAVAVLLNPVMPETSQKLWD 478


>gi|254457829|ref|ZP_05071256.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085222|gb|EDZ62507.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 652

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/508 (40%), Positives = 303/508 (59%), Gaps = 13/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N + HIGHAY   IAD + R+ +L G    F TGTDEHGQKI ++AQ  G 
Sbjct: 4   YITTPIYYVNGEAHIGHAYTTFIADTMTRYEKLKGNYTYFLTGTDEHGQKIEESAQKHGK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+ F D+ S  F+D+ D  +I YD FIRTT+  H    +  ++ +  KGDIYK  Y G 
Sbjct: 64  PTQEFADEISATFKDLWDEFEIGYDKFIRTTDADHKLGVQKAFEVMYAKGDIYKDFYEGH 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E ++ + ++    DG++          ++EE YFF+LS Y+D LL +YE +P+FI
Sbjct: 124 YCVSCETFFPETQLI---DGEFCPDCGRTTSVVKEESYFFKLSKYEDALLRHYEDNPDFI 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  R NEV +FVK GL+DLS++R +F WG+K+P+   D +++MYVW+DAL NY+T  GY
Sbjct: 181 LPRSRANEVKNFVKGGLRDLSVTRTSFTWGVKLPESMNDDKHVMYVWLDALMNYITALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D +   FWPA + ++GKDILRFHAIYWPAFL+S +LPLPK + +HG+    GEK+S
Sbjct: 241 --GKDDANMDFWPASMQLVGKDILRFHAIYWPAFLMSLDLPLPKHIGAHGWWTRDGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P EV +  GV+ LRYF++RE+  G+DG + +     R+N++L+N +GNL++R
Sbjct: 299 KSKGNVISPKEVSDAYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K  D  I +     +     L   +  L  +   MQN   HR L ++  L +  
Sbjct: 359 IIGMSEKYSDFEIDSVDV-EKYHAKELEAMNEALGNLDGFMQNMQTHRYLEELWKLFAIG 417

Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++  +   PW ++K+   D A   + +   ++ + +I+L   +P+    I D L    +N
Sbjct: 418 NKAIEEHAPWVKIKEGKKDEALATVALVANILAKASIMLSPVMPRTTATIADALNFTIDN 477

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509
             F  L  D++L   F + K   P+FPR
Sbjct: 478 ASFNELVIDKKLLKLFNIKKV-PPLFPR 504


>gi|116333117|ref|YP_794644.1| methyonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098464|gb|ABJ63613.1| methionyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 677

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/521 (38%), Positives = 305/521 (58%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+T I YP+ + HIG++Y  I  D +AR+ R +G DV F TGTDEHG KI  
Sbjct: 1   MADKPSFYITTPIYYPSGRLHIGNSYTTIACDTVARYKRSNGYDVFFLTGTDEHGLKIED 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T + +VD  +   + +   L+IS D FIRTT+  H    + ++ ++  +GDIY
Sbjct: 61  KAKAQNQTPQEYVDGMATGIKQLWKTLEISNDKFIRTTDHEHVAAVQAIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS  DE Y+ + +   VY+ ADG+    Q    + V  ++E+ YFF++S Y D
Sbjct: 121 LGEYEGWYSEDDEEYFTETQLAKVYRDADGKMIGGQAPSGHDVSLVKEQSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL +Y SHP FI P  R  E+I+ F+K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 WLLDFYHSHPHFIQPESRMTEMINNFIKPGLEDLAVSRTTFSWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + DG   KFWPAD+ ++GK+I+RFH+IYWP  L +  L +PK++F+H
Sbjct: 241 ALLNYITALGYTSDDDGLFKKFWPADVQMVGKEIVRFHSIYWPIVLHALGLEMPKELFAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNVI P  +++  G+DALRY+L+R +  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLMRAMPYGNDGVFSPEDFVDRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G +P      TE D  + +  + V+    + M       
Sbjct: 361 LANDLGNLLNRTVAMINKYEGGQLPQYQAGVTEFDADLEATAAAVITNYHDLMNQMHFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  LV+  ++Y D  +PW+L K  +     + V+      +R +A L+   +    
Sbjct: 421 ALAEIWKLVARSNKYIDETEPWKLAKDDSKATELAAVMAHLAASLRVIATLISPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            +IFD L +         L    L  G  +     PIFPR 
Sbjct: 481 KEIFDQLGLDVATLTMTDLALADLPAGKQVVAKGTPIFPRI 521


>gi|125718503|ref|YP_001035636.1| methionyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498420|gb|ABN45086.1| Methionyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 666

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/522 (37%), Positives = 312/522 (59%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG+A   I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGNATTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVAVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY  +   +  KFW      H++ KDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNNGTVYHMVAKDILRFHSIYWPILLMMLDIKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+VSMI K +DG +PT     T+ D ++  V S  + +  ++M     
Sbjct: 361 YELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVASESIADYYKHMDAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +L+S  ++Y D   PW L K        + V+      +  +A +++ F+ +
Sbjct: 421 PRALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLCVVAHMIEPFMME 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 TSKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 522


>gi|298492950|ref|YP_003723127.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234868|gb|ADI66004.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 533

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/484 (40%), Positives = 292/484 (60%), Gaps = 13/484 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  + ADV+ARF R  G  VL  TGTDEHGQKI ++
Sbjct: 6   KTSKTFALTTPLYYVNDVPHIGSAYTTMAADVVARFQRSLGHQVLLVTGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A +     + F DQ   +F ++ +VL+I YD F RTT   H+   +  ++++ + GDIY+
Sbjct: 66  AASLEKPPQEFCDQIVPSFINLWEVLNIQYDRFSRTTALNHYAIVKEFFQRVWENGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+  G     + ++   V+W +E+ YFFRLS YQ KL  +Y+
Sbjct: 126 GQQKGWYCVSCEEFKEERELLDGKRCPIHTSKE--VEWRDEQNYFFRLSKYQTKLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P+FI P  RRNEV++FV  GL+D S+SR   DWG  +  DP++ +YVW DAL  Y+T 
Sbjct: 184 SSPDFIQPPSRRNEVLNFVGQGLQDFSISRVNLDWGFPVSVDPKHTLYVWFDALLGYVTA 243

Query: 242 TGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              L  PD          K+WP +LH+IGKDILRFHA+YWPA L+SA LPLP++VF HGF
Sbjct: 244 ---LLEPDAEATLANALEKWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPERVFGHGF 300

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G+K+ K+LGN +DPI +++  G DA+RY+ ++EI  GKDG +++      +NADLA
Sbjct: 301 LTKDGQKMGKTLGNTLDPISLVQRYGSDAVRYYFLKEIEFGKDGDFNETRFINVLNADLA 360

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL-QEIRENMQNQLIHRAL 414
           N +GNL++R+++M+ K   G +P+       +E+ L      L +++++       + A 
Sbjct: 361 NDLGNLLNRTLNMVKKYSTGKVPSIDPEAIPNENALKAIGLGLGEQVKQAYTALAFNEAC 420

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V+SLV   +++ D Q PW L K+   +    VLY  +E +R  A LL   +P +++ I
Sbjct: 421 HSVLSLVQASNKFIDEQAPWSLYKQGKQEEVEVVLYTVLESVRLAAYLLSPIIPNISSDI 480

Query: 474 FDIL 477
           +  L
Sbjct: 481 YQQL 484


>gi|28896469|ref|NP_802819.1| methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|28811720|dbj|BAC64652.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 666

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  V    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|322386045|ref|ZP_08059684.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269889|gb|EFX52810.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 665

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/521 (37%), Positives = 312/521 (59%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTTKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYAGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 181 RLVEFFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPRHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +  G+  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 241 ALLNYVTALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPVLLMMLDVKLPERLIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVAAQSITDYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  +     PIFPR 
Sbjct: 481 SKAVLSQLGLPQAVSLENLAIDQLPAGLTVVDKGTPIFPRL 521


>gi|237752716|ref|ZP_04583196.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376205|gb|EEO26296.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 657

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/499 (42%), Positives = 314/499 (62%), Gaps = 28/499 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI++ I Y N  PHIGHAY  II D LARFHRL G  V   TGTDEHGQKI ++A+  
Sbjct: 4   KFYITSPIYYVNDIPHIGHAYTTIIVDTLARFHRLKGNSVFCLTGTDEHGQKIEQSAKKM 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K +VD  S+ F+D+ D  DI+YD FIRTT+  H  + + ++ K+ +KGDIYKG Y 
Sbjct: 64  GQDPKNYVDSISKRFKDLWDSFDIAYDYFIRTTDSTHLQSAQYVFLKMYEKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYY 180
           G Y +  E+++        A  Q  + ++ P        ++EE YFF+LSAY ++LL +Y
Sbjct: 124 GNYCISCESFF--------AKSQLMSEKNCPDCGKETTLLQEESYFFKLSAYAERLLKFY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------DDPQYIMYVWI 232
           + +P+FILP  RRNEVISFVKSGL+DLS++R +FDWGIK+P        ++ +++MYVW+
Sbjct: 176 DENPDFILPKSRRNEVISFVKSGLEDLSITRTSFDWGIKLPKELLENNPNNQKHVMYVWL 235

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYL+  G+  N   +K  FWPA+ H++GKDILRFHAIYWPAFL+S +LPLPK + +
Sbjct: 236 DALVNYLSALGF-HNDLPNKMDFWPANFHIVGKDILRFHAIYWPAFLMSLDLPLPKHIAA 294

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+    G K+SKS+GNV++P EV++  G+D  RYF++RE+  G+DG + +  L +R+NA
Sbjct: 295 HGWWTKDGAKMSKSIGNVVNPKEVVDAYGLDTFRYFILREVPFGQDGDFSQSALIERINA 354

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQL 409
           DL N +GNL++R + M  K ++  +    +  +S   DE  L     +L+ +  ++    
Sbjct: 355 DLGNDLGNLLNRLLGMGAKYFNNKLKADLSELKSTYCDE--LVQIQTILESLESHINEVQ 412

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPK 468
           I+R L ++  L S  +     ++PW+L K N     + +L +   ++ + A+ L   +PK
Sbjct: 413 INRYLEELWKLFSLGNGIIAKKEPWQLIKDNKHTEVAQLLLLLANILLKAALFLSPCMPK 472

Query: 469 LANKIFDILFVADENRCFQ 487
            A+KI  +  +     CF+
Sbjct: 473 SADKILKVFGLNANTECFK 491


>gi|326201023|ref|ZP_08190895.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988591|gb|EGD49415.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 654

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/513 (39%), Positives = 314/513 (61%), Gaps = 19/513 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++TAIAY +++PHIG+ +E+++AD  ARF R+ G DV F TGTDEHGQKI   A+  G+
Sbjct: 7   YLTTAIAYTSSKPHIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKAKEVGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K +VD  +   + + D+++ +YD FIRTT++ H    + ++KK+ ++GDIYKG Y G 
Sbjct: 67  SPKEYVDNFAVEIKRICDLMNTTYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKGHYEGM 126

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    EA++   ++  G         H P +   EE YF +LS Y D+L+ +   HPEFI
Sbjct: 127 YCTPCEAFFTPSQLVDGKCPDCGRECH-PAK---EEAYFLKLSKYADRLIQHINEHPEFI 182

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-L 245
            P  R+NE+++ F+  GL+DL +SR +F WGI +  D ++++YVW+DAL+NY+T  G+ +
Sbjct: 183 QPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNYITGLGFDV 242

Query: 246 D-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D N D    K+WPAD+H+IGKDILRFH IYWP  L++  +PLPK+VF H ++L    K+S
Sbjct: 243 DGNNDEKFNKYWPADMHLIGKDILRFHTIYWPIMLMAMEVPLPKQVFGHPWLLMGNGKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI   E+++  GVDA+RY+++ E+    DG    + + +R+N+DLAN +GNLV+R
Sbjct: 303 KSKGNVIYADELVDIFGVDAVRYYVLHEMPFDNDGVISWELITERINSDLANVLGNLVNR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            ++M  K + G++       E D  ++ +  +  + + E M    +  AL+++ SL    
Sbjct: 363 VIAMSNKYFSGVVNNSNVREEIDNELIELTLKTPETVVEKMDKLRVADALSEIFSLFKRC 422

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R  TVLY  VE I   A LL+AF+P+ A KI     VA  
Sbjct: 423 NKYIDETMPWILAKDEDKKPRLETVLYNLVESIVTGASLLEAFMPETAQKI-----VAQL 477

Query: 483 NRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510
           N   +SL+      + K G  + +T + +F R 
Sbjct: 478 NTSIRSLEDMKVYGQYKSGAKVTETPEILFLRL 510


>gi|21909836|ref|NP_664104.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|25009347|sp|P59080|SYM_STRP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21904022|gb|AAM78907.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
          Length = 665

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  V    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|323359386|ref|YP_004225782.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275757|dbj|BAJ75902.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 524

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 306/523 (58%), Gaps = 17/523 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+  PHIGH Y  +  D LAR+HR  G D    TGTDEHGQK+ +
Sbjct: 1   MTSGRSFYITTPIYYPSDVPHIGHGYTTVAVDTLARWHRQAGDDTWMLTGTDEHGQKMMR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA   G T + +VD+    ++  +   LD++ DDFIRT++ RH +      + + D+G I
Sbjct: 61  AAAANGATPQEWVDKLVGESWFPLLKTLDVANDDFIRTSQPRHEERVAKFVQALYDRGYI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHN-PVQWMEEEGYFFRLSAYQDK 175
           Y G +   Y +  E +  + E+  G    +G    A H+ P++ ++E+ YFF+LS +Q+ 
Sbjct: 121 YAGEFEALYCVGCEEFKTEAEIVDGEGPFEGLKVCAIHSKPLELLQEKNYFFKLSEFQEP 180

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  Y++ P+F+ P   RNEV+SFVK+GLKDLS+SR TFDWGI++P D  +++YVW+DAL
Sbjct: 181 LLELYKTVPDFVRPESARNEVVSFVKNGLKDLSISRSTFDWGIQVPWDEAHVIYVWVDAL 240

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY T  GY  +P+   A+ WPA  HV+GKDILRFHA+ WPA L++A L +P+ VF+HG+
Sbjct: 241 LNYATAIGYGTDPE-EFARRWPA-YHVVGKDILRFHAVIWPAMLMAAGLEVPRGVFAHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P E+ +  G DA R++ +  IA G+DG +  + L  R  A+LA
Sbjct: 299 LLVGGEKMSKSKLTGIAPTEITDVFGSDAYRFYFLSAIAFGQDGSFSWEDLSARYQAELA 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR+++MI + ++G++P  G  TE D +I    +         ++   I  A+A
Sbjct: 359 NGFGNLASRTIAMIERYFEGIVPPSGELTEIDLAIQRTVADAATNADAAIEKFRIDEAIA 418

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + ++V  ++ Y    +PW L K     +R  TVLY   E +R LA+LL   +P    K+
Sbjct: 419 AIWTIVDALNGYITDNEPWALAKGPEKRERLGTVLYTAAEGLRALAVLLSPVMPIATEKL 478

Query: 474 FDILFVADENRCFQSLDQR-------LKPGFMLHKTFDPIFPR 509
           +  L  A+          R       L+PG  ++    P+FPR
Sbjct: 479 WIALGAAESIGRLHDQPLREAGEWGALRPGSSVNG-LSPLFPR 520


>gi|306825043|ref|ZP_07458385.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432479|gb|EFM35453.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 679

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 312/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV   TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFCLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAAGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGIVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 254 ALLNYATALGYGQDDHTNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGKVPAYVEGVTEFDNALAQVAEQSISDYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +  +A L++ F+   
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLHIVAHLIEPFMMGT 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 494 SQAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 534


>gi|85057769|ref|YP_456685.1| methionyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789874|gb|ABC65606.1| methiony-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 520

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/498 (42%), Positives = 307/498 (61%), Gaps = 20/498 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K ++STAIAY +  PHIG+ YE I+AD +ARF RL+G DV F TGTDEHGQKIA  
Sbjct: 6   KQKPKFFLSTAIAYASGIPHIGNVYECILADAIARFKRLEGFDVFFQTGTDEHGQKIAAK 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +   G   + +VDQ S   + + D++ +SYD F++TT   H  T + ++ K+  KGDIY 
Sbjct: 66  SLQQGKNPQEYVDQISLEIKRIYDLMQVSYDKFVKTTNPNHKQTVQAIFDKLWKKGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G YS+ +E+Y    ++    DG+  N +  P+  + EE YFF++S YQ  LL Y E
Sbjct: 126 GKYQGLYSVSEESYVAPKDL---IDGKTSNGEI-PI-LISEETYFFKISKYQSHLLKYLE 180

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P  I P  +R E+++ +K  L DLS+SR +F WGI++P DP++++YVWIDAL+NYLT 
Sbjct: 181 NNPSLIKPDAQRKELLNLLKEPLSDLSVSRTSFKWGIRVPFDPKHVIYVWIDALSNYLTG 240

Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY  NP    ++F   WP D+HVIGKDILRFH IYWP  L++  + LPK+  +H +IL 
Sbjct: 241 LGY--NPTSENSQFNRYWPCDMHVIGKDILRFHLIYWPILLMALEISLPKQFLTHPWILF 298

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   ++++   VD++RYF++ EI   +DG    + L +R N+DLAN +
Sbjct: 299 DKNKMSKSKGNVLYVDDLLKHFPVDSIRYFVLSEIPYAQDGNITYELLVERHNSDLANVL 358

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ---EIRENMQNQLIHRALA 415
           GNLV R   MI K Y     +    T + +    +  + L     +R  MQ+  +  AL 
Sbjct: 359 GNLVHRVFGMI-KIYRQNNLSKTLITSNLDPKFDLSKQTLATLPSVRLKMQDYKVGDALK 417

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANK 472
           ++I+L    ++Y D  +PW L K NP++   +   LY  VE +R L +LLQ F+P+ ANK
Sbjct: 418 KIINLARFANKYIDLVEPWNLFK-NPEKQQLLDHTLYSLVEALRFLGVLLQPFLPQTANK 476

Query: 473 IFDILFVADENRCFQSLD 490
           I   L  +D    F+SLD
Sbjct: 477 ILTQLKASD--ITFKSLD 492


>gi|320547307|ref|ZP_08041598.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448005|gb|EFW88757.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 666

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/525 (38%), Positives = 312/525 (59%), Gaps = 19/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + +  +LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 241 ALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G +P      TE D  + ++ +  + E  + M      
Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEVPAYVENVTEFDADLAALVAEKITEYHKQMNAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V S++S  ++Y D   PW L K     D  + V+      +R +A L+Q F+   
Sbjct: 421 RALDAVWSIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +      EN       + +K    +     PIFPR 
Sbjct: 481 SNAIMEQLGLGANFDLENLALSGFPEGVK----VVAKGTPIFPRL 521


>gi|301109886|ref|XP_002904023.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262096149|gb|EEY54201.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 727

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/499 (39%), Positives = 305/499 (61%), Gaps = 23/499 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE  Y++TAI Y N  PH+GHAYE + +DV+ R+HR+ G DV F TGTDEHGQKIA+ A+
Sbjct: 39  RETFYLTTAIHYTNGLPHMGHAYENVCSDVICRYHRVFGRDVYFLTGTDEHGQKIAQTAE 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT +  VD+ +  F+ +   L++S ++FIRTT   H    + L+++  DKGD+Y G 
Sbjct: 99  AAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGT 158

Query: 124 YSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y GWY++R+E +  + E     YK              + M+E+ YFF++S YQD+L+ +
Sbjct: 159 YEGWYNVREEMFVTETEAQLTDYKDP------TTGTSFKKMQEQSYFFKMSKYQDRLVKH 212

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E +P+F+ P  RR E++  +K  L+DLS SR TF  G+ I +DP++++YVW DAL NYL
Sbjct: 213 IEENPDFLQPEVRRQELLRRLKEPLQDLSASRNTFAHGVPILNDPKHVLYVWFDALANYL 272

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY   PDG +A++WPA++H+IGKDI  FH + WP  L+S  +PLPK+VF+HGF+  K
Sbjct: 273 SAIGY---PDGPEARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAK 329

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS+GNVIDP  +IE  G+++ RYF+VR    G+D  + +D L    N++LA+ +
Sbjct: 330 DGSKMSKSVGNVIDPYAMIERYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTL 389

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV R+V++  K  +G++P   A    D         +L+   ++ ++  +  A   ++
Sbjct: 390 GNLVHRTVNICKKYSNGVVPLAKADKPFD------IYELLKYSEDSYKDFSLQNACIAIV 443

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + + + ++Y   ++PW +K+  P     V+   +E I  LA  L A +P+ A  IFD L 
Sbjct: 444 NTLKDTNKYLTEKEPWHMKENEPRL--VVVRTCLEAIYVLAHYLSAIIPQTAQIIFDKLG 501

Query: 479 VADENRCFQSLD-QRLKPG 496
                    S +   LKPG
Sbjct: 502 TPPTTLTALSPEYDNLKPG 520


>gi|306827914|ref|ZP_07461181.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429833|gb|EFM32875.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 666

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/518 (38%), Positives = 313/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|85859641|ref|YP_461843.1| methionyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722732|gb|ABC77675.1| methionyl-tRNA synthetase / protein secretion chaperonin
           [Syntrophus aciditrophicus SB]
          Length = 644

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/514 (40%), Positives = 310/514 (60%), Gaps = 20/514 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA PHIGHAY  I+ADVLAR+HRL G    F TGTDEHG KIA+AA+ 
Sbjct: 13  KTFYITTPIYYVNASPHIGHAYTTIVADVLARYHRLSGHRTFFLTGTDEHGDKIAEAAEK 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K + D+ S  FR++   L +S D FIRTT+  H  T + +  K+ + GDIY G Y
Sbjct: 73  NGISPKAYADRISSQFRNLWPELSVSNDYFIRTTDANHIATVQAILSKVYEAGDIYFGHY 132

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y +  E +Y + E+    DG+  + Q  P ++ +E  YFF++S YQD L+S+ +++P
Sbjct: 133 EGFYCVGCERFYTEKEL---IDGKCPDHQMEP-EFRKESNYFFKMSKYQDWLISHIKANP 188

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P   RNEV++F++  L+DL +SR      WGI +P D  Y+ YVW DAL NY+T  
Sbjct: 189 DFIRPERYRNEVLAFLREPLEDLCISRPKSRLAWGISLPFDANYVTYVWFDALINYITGL 248

Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY   PDG     FWP   H+I KDIL+ H IYWP  L +A +   + +  HG+      
Sbjct: 249 GY---PDGENFHTFWPVAQHLIAKDILKPHGIYWPTMLKAAGIEPYRHLNVHGYWNVDQS 305

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI P+++ ++ G+DA RY+L+RE+  G D  + ++G  +RVNADLAN +GNL
Sbjct: 306 KMSKSLGNVIRPLDLKDKYGLDAFRYYLLREMVFGLDSSFSEEGFVQRVNADLANDLGNL 365

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR  +M +K   G +  P A +E+D  + S   RV+QE+  + +    H+AL  +  L+
Sbjct: 366 VSRVTAMAVKYCKGSV--PAASSEADTILSSTAVRVIQEVEASFRELTFHKALMSIWDLI 423

Query: 422 SEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +RY   ++PW L K   ++ +   V+Y  +E +R +++L+  F+P  + KI   L +
Sbjct: 424 NTANRYIVEKEPWNLAKDPANQGTLDDVIYSLLETLRIVSVLIAPFMPGSSVKIMTSLGI 483

Query: 480 ADENRCFQSLDQ-RLKPGFMLHKTF---DPIFPR 509
           A  N   Q+ D  R   G    +T    + +FPR
Sbjct: 484 A--NPELQNFDMIRTWGGLAAGQTLERGEALFPR 515


>gi|50913716|ref|YP_059688.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50902790|gb|AAT86505.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 666

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|78777263|ref|YP_393578.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497803|gb|ABB44343.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 644

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/507 (39%), Positives = 306/507 (60%), Gaps = 11/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N + HIGHAY   IAD LAR+ +L G D  F TGTDEHGQKI ++AQ    
Sbjct: 4   YITTPIYYVNGEAHIGHAYTTFIADTLARYEKLKGEDTYFLTGTDEHGQKIEESAQKNSK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+ F D+ S +F+++ D  DISYD FIRTT+  H    +  ++ +  KGDIYK  Y G 
Sbjct: 64  PTQEFADEISASFKNLWDEFDISYDKFIRTTDAEHKKGVQRAFEVMYAKGDIYKDFYEGH 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E ++ + ++    DG++          ++EE YFFRLS Y++ LL +YE +P+FI
Sbjct: 124 YCVSCETFFTETQL---VDGEFCPDCGRSTNIVKEESYFFRLSKYENALLKHYEENPDFI 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  R NEVI+FVK GL+DLS++R +F WG+ +P+   D +++MYVW+DAL NY+T  GY
Sbjct: 181 LPRSRANEVINFVKGGLRDLSVTRTSFTWGVGMPNSIKDDKHVMYVWLDALMNYITALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               +    ++WPA +  +GKDILRFHAIYWPAFL+S +LPLP+ + +HG+    GEK+S
Sbjct: 241 GTTEEN--MRYWPASVQFVGKDILRFHAIYWPAFLMSIDLPLPQHIGAHGWWTRDGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P +V +  GV+ LRYF++RE+  G+DG + +     R+N++L+N +GNL++R
Sbjct: 299 KSKGNVISPKQVADVYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K  D  I +        + I    + VL  +   M+N   HR L ++  L S  
Sbjct: 359 IIGMSGKYSDFEIESVNVLKYHKKEI-DAMNVVLDSLDIFMKNFQTHRYLEELWKLFSIG 417

Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++  +   PW ++K    D A + + +   ++ + +I+L   +P+  + I D L  +  +
Sbjct: 418 NKAIEEHAPWVKMKDGKKDEALSTVALVANILAKASIMLHPVMPRTTDIIADALNFSISH 477

Query: 484 RCFQSLDQRLKPGFMLH-KTFDPIFPR 509
             ++ L Q  K   + + K   P+FPR
Sbjct: 478 ESYRELVQEKKLLKLFNIKPVPPLFPR 504


>gi|256545789|ref|ZP_05473145.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398485|gb|EEU12106.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 646

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/489 (42%), Positives = 304/489 (62%), Gaps = 11/489 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI  AA
Sbjct: 2   DKNAYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKALRGFDAYLTTGTDEHGQKIMNAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G   + FVD+ +   + +   LDI YD FIR+T+ +H +  + +++ + DKGDIYKG
Sbjct: 62  LSHGSKPQEFVDRIAGETKVLLKKLDIDYDSFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E+Y+ + ++    DG   +     V   +EE YFFRLS Y DKL   ++ 
Sbjct: 122 HYDGYYCESCESYFTESQL---DDGNCPDCGRG-VNHRKEESYFFRLSNYTDKLKELFKD 177

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEF+ P  R+NE+++ F+  GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT 
Sbjct: 178 HPEFLEPKFRQNEMLNNFIDKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY    D  K  K+WPA +H+IGKDI+RFH I WPA L++ ++PLPKKVF+HG+IL   
Sbjct: 238 IGY--GYDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPKKVFAHGWILFDN 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN++ P  ++E  G D+L+YFL+RE   G DG +       R N+DL N +GN
Sbjct: 296 DKMSKSKGNIMYPEPLVELYGTDSLKYFLLREFNFGADGNFLSKKFMDRYNSDLVNDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  DG+I       E D  ++++  +  ++  + M     + AL  + +L
Sbjct: 356 LLSRTVSMISKYNDGIIKKGLEEDEIDGELIALAEKTYEDFTKLMDEFKFNEALECLWNL 415

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V   ++Y D  +PW L ++ N DR +TVLY   E +R +A +L   +     +I   L V
Sbjct: 416 VRRSNKYVDQTEPWILGREENYDRLNTVLYNLAESLRIIAQMLGPVMRNTTEEILRQLGV 475

Query: 480 ADENRCFQS 488
             EN+ F+S
Sbjct: 476 --ENQGFES 482


>gi|139474323|ref|YP_001129039.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|73919759|sp|Q5XDK8|SYM_STRP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134272570|emb|CAM30836.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 665

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|17227729|ref|NP_484277.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|25009375|sp|Q8Z068|SYM_ANASP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|17135211|dbj|BAB77757.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 530

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 295/485 (60%), Gaps = 15/485 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  + AD +ARF +L G DVL  TGTDEHGQKI ++
Sbjct: 6   KAEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F D+   +F  +  +L+I YD F RTT  RH       + ++ + GDIY+
Sbjct: 66  AESLGKAPQEFCDEIVPSFMSLWRLLNIQYDRFSRTTAVRHKAIVDEFFARVWEAGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G     +   +  V+W +E+ YFFRLS YQ +L  +Y+
Sbjct: 126 GQQKGWYCVSCEEFKEERELLEGNRCPIH--VNKEVEWRDEQNYFFRLSKYQTQLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP+FI P  RRNEV++FV  GL+D S+SR   DWG  +P+DP++ +YVW DAL  Y+T 
Sbjct: 184 SHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPNDPKHTLYVWFDALLAYVT- 242

Query: 242 TGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
              LD  D      +  K+WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+
Sbjct: 243 -ALLDPEDEPTLENALGKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFL 301

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+ KSLGN +DP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN
Sbjct: 302 TKDGQKMGKSLGNTVDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFIHVLNADLAN 361

Query: 357 GIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            +GNL++R+++M+ K   +Y   I       E+    L V   +  ++++  +    ++A
Sbjct: 362 DLGNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGV--DLGAKVKQAYEVLAFNQA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
              V+SLV   +++ D Q PW L K+       TVLY  +E +R  A LL   +P +++ 
Sbjct: 420 CGVVLSLVQASNKFIDDQAPWSLYKQERQQEVETVLYTVLESVRLAAYLLSPVIPNISSN 479

Query: 473 IFDIL 477
           I+  L
Sbjct: 480 IYQQL 484


>gi|126656215|ref|ZP_01727599.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622495|gb|EAZ93201.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 535

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/492 (39%), Positives = 297/492 (60%), Gaps = 14/492 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +K  ++T + Y N  PHIG AY  IIADV+AR+ RL G +VL  TGTDEHGQKI + 
Sbjct: 6   KKPKKFALTTPLYYVNGVPHIGSAYTTIIADVIARYKRLIGEEVLLITGTDEHGQKIQRT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +   DQ   +F+ +   LDI YD F RTT  +H    +  + ++ + GDIY 
Sbjct: 66  AQEKGLLPQDHCDQIVGSFKQLWQKLDIQYDRFSRTTATKHEAIVKEFFGRVWENGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               GWY ++ E +    E+ +  DG      +   +W +EE YFF+LS YQ KL   Y 
Sbjct: 126 AQQQGWYCVQCEEFKEKRELLE--DGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELYA 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE+++F+  GL+D S+SR   +WG  IP DP + +YVW DAL  Y+T 
Sbjct: 184 KNPQFIEPESRRNEILNFMNQGLQDFSISRVNLEWGFPIPKDPNHTIYVWFDALLGYVTA 243

Query: 242 TGYLDNP------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              L  P      D + +++WP +LH+IGKDILRFHAIYWPA L+SANLPLP+++F HGF
Sbjct: 244 ---LLEPEEEPTLDNALSEWWPINLHLIGKDILRFHAIYWPAMLMSANLPLPEQIFGHGF 300

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G+K+ KSLGN +DP +++++ G D++RY+ ++EI CGKDG +++      +NADLA
Sbjct: 301 LTKDGQKMGKSLGNTLDPFDLVDKYGSDSVRYYFLKEIECGKDGDFNETRFVNILNADLA 360

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R++ M  K   G +P   A     D  + ++   + +++ +  +    +   
Sbjct: 361 NDLGNLLNRTLGMTQKYCQGSLPEITASELPQDHPLKTIGLSLGEKVIKAYEKLKFNEGC 420

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++++L+   +++ D Q PW L K+        +LY  +E +R  A LL   +P L++KI
Sbjct: 421 EEILTLIQAGNKFIDEQAPWRLFKEGKQAEVEKILYGVLESVRLAAYLLAPIIPNLSSKI 480

Query: 474 FDIL-FVADENR 484
           ++ L F  D N+
Sbjct: 481 YEQLGFSVDFNQ 492


>gi|94993743|ref|YP_601841.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94547251|gb|ABF37297.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Streptococcus pyogenes MGAS10750]
          Length = 666

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|302388627|ref|YP_003824448.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199255|gb|ADL06825.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 644

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/521 (42%), Positives = 310/521 (59%), Gaps = 22/521 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R   YI+T I Y NAQPHIGHAY  I+AD LAR+HRL G D  F TGTDEHG+KIA+
Sbjct: 1   MKDR-IFYITTPIYYVNAQPHIGHAYTTIVADFLARWHRLAGYDTFFLTGTDEHGEKIAQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G   + FVD+ S  FR+  + L I YDDFIRTT++RH    + + +K+ D GDIY
Sbjct: 60  AAQKNGEEPQAFVDRVSARFREAWEKLCIEYDDFIRTTDERHKKVVQYVLQKVYDAGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG-YFFRLSAYQDKLLSY 179
            G Y G Y +  E +  + E+  G         H  V     EG YFFR+  Y++ L  Y
Sbjct: 120 YGEYEGLYCVGCERFLTEKELVDGR-----CPDHGTVPERRREGNYFFRMEKYREWLRDY 174

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +++P+FI P   RNEV+S +   + DLS+S  R+   WGI +P D  ++ YVW DAL N
Sbjct: 175 IQANPDFIRPEGYRNEVLSMLSEPVGDLSISRPRQRVPWGIPLPWDEDHVTYVWFDALLN 234

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y++  GY   PDG K  +FW    H++GKDIL+ HA++WP  L SA +PL + +   GF+
Sbjct: 235 YVSALGY---PDGEKYHRFWTHAWHLVGKDILKPHAVFWPTMLKSAGIPLYRHLNVGGFL 291

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           L   G K+SKSLGNV+DP  + E+ G D +RY+L+RE+  G+DG   + GL +R NADLA
Sbjct: 292 LGPDGRKMSKSLGNVVDPFALAEKYGPDVVRYYLLRELPYGQDGAVGEPGLVERYNADLA 351

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N +GNL+SR+V+MI K Y G IP PG  +E  +  L   +  L +  EN+ N L I  AL
Sbjct: 352 NDLGNLLSRTVTMIEKFYSGYIPAPG-LSEGPDHELIALAEGLPDRLENLINGLEITEAL 410

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++   +   ++Y D   PW L K     +R +TV+Y   E +R +++ +   +P  + +
Sbjct: 411 KEIWKFIGRANKYIDETAPWTLAKDPAKKERLATVIYNLAEALRIISVHISPVMPNTSGE 470

Query: 473 IFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           I   L +ADE    ++S+ +  RL  G  +      IFPR 
Sbjct: 471 IRRQLGIADEGLFTWESVRKWGRLPAGLKIGGK-RIIFPRI 510


>gi|222152637|ref|YP_002561812.1| methionyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113448|emb|CAR41140.1| methionyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 668

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 316/529 (59%), Gaps = 26/529 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+    V + TG DEHGQKI  
Sbjct: 1   MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHQVFYLTGLDEHGQKIQT 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  ++  +++ ++LDISYD FIRTT+  H +    +++K+  + DIY
Sbjct: 61  KAEEAGITPQEYVDGMAKGVKELWELLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G          + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGNVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           KL++++  HPEFI P  R NE+I +F++ GL+DL++SR TF WG+K+P +P++++YVWID
Sbjct: 181 KLVAFFNEHPEFIQPEGRMNEMIKNFIEPGLEDLAVSRTTFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +   FW      H++GKDILRFH+IYWP  L+  ++ LP+++ 
Sbjct: 241 ALLNYATALGYGQEDKANFETFWNNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPERLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407
            +LAN +GNL++R+V+MI K + G IP   A+TE+    D  +  + +  + +  + M+ 
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGKIP---AYTENVTAFDGELQDLVTEKITDYHKQMET 417

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAF 465
               RAL  + +++S  ++Y D   PW L K + D+   ++V+      +R +A L+Q F
Sbjct: 418 VDYPRALDAIWAIISRANKYIDETAPWVLAKEDGDKEQLASVMAHLAASLRVVAHLIQPF 477

Query: 466 VPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +N I + L +      EN     +   +     +     PIFPR 
Sbjct: 478 MMTTSNAIMEQLGLGQSFDLENLSLAGMPSDIT----VISKGQPIFPRL 522


>gi|331266178|ref|YP_004325808.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682850|emb|CBZ00467.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 665

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/522 (38%), Positives = 314/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQ+
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQN 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNALAQVAEQSISDYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A +++ F+   
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHMIEPFMMGT 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           +  +   L +A E    ++L     P    +     PIFPR 
Sbjct: 480 SRAVLAQLGLA-EVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|320450854|ref|YP_004202950.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151023|gb|ADW22401.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 627

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/506 (39%), Positives = 302/506 (59%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYITTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYQTFFLTGTDEHGETVYRAAQRAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + FVD+ S+ FR   ++L I+YDDFIRTTE+RH    + + +++ + GDIY G Y G
Sbjct: 65  EEPQAFVDRVSQRFRKAWELLGIAYDDFIRTTEERHKRVVQRVLQRVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+     G        PV+   E  YFFR+  Y++ L+ Y ++HP+ 
Sbjct: 125 LYCVSCERFYTEKEL----QGDLCPIHGRPVERRREGNYFFRMEKYREWLIDYLQTHPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+S +   + DLS+SR      WGI +P D  ++ YVW DAL NY++  GY
Sbjct: 181 IRPEGYRNEVLSMLSEPIGDLSISRPKARVPWGIPLPWDEVHVTYVWFDALLNYVSALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
            D+P    A FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 PDDP--RFATFWPQAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  + E+ G DA+RY+L+REI  G+D    ++ L+ R  ADLA+ +GNL+ 
Sbjct: 299 SKTLGNVVDPFLLTEKYGRDAVRYYLLREIPYGQDTPVSEEALRARYEADLADDLGNLLQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  DG IP P    E +E      +R+   +R  +++   H AL + ++ V  
Sbjct: 359 RTRAMLFRFADGRIPEPVPGEELEEG-----TRLAGRLRGLVRDLRFHVALEETMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + ++PWEL K +P  A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKRPWELFKEDPREAKAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLREEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     L +    +FP+
Sbjct: 474 RLEEAERWGLAGPLPLPQEAGVLFPK 499


>gi|315637191|ref|ZP_07892413.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315478558|gb|EFU69269.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 650

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/517 (39%), Positives = 319/517 (61%), Gaps = 14/517 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  K +YI+T I Y N   HIGHAY  IIAD+LAR+ RL G +    TGTDEHGQKIA
Sbjct: 1   MQESCKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGSNTFLLTGTDEHGQKIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           ++A+    T K + D+ S  FR + D  DI+YD FIRTT++ H    +  ++ +  KGDI
Sbjct: 61  QSAEIRNKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G+Y +  E ++ + ++    D Q+          ++EE YFF LS Y++KLL +
Sbjct: 121 YKGEYEGFYCVPCETFFPESQL---VDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKW 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALT 236
           YE + + ILP  ++NE+++FVK GLKDLS+SR +F WG+K+P+   +P+++MYVW+DAL 
Sbjct: 178 YEENEDCILPRSKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALL 237

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D     FWPA++H++GKDILRFH+IYWPAFL+S +LPLPK + +HG+ 
Sbjct: 238 NYITALGY--GTDDKNMNFWPANIHLVGKDILRFHSIYWPAFLMSLDLPLPKHIAAHGWW 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKS GN+++P EV +  G+DA RYF++RE+  G+DG + +  L  R+N+DL N
Sbjct: 296 TRDGEKMSKSKGNIVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALIDRINSDLGN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL++R   M  K +D  + +     +  +  L   + +L  + + + N  I+R L +
Sbjct: 356 DLGNLLNRISGMSGKYFDYKVSSVDV-EKFHKKELDEVNEILDGVEKYIYNMQINRYLEE 414

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  +++  ++  +  +PW L K   +  A  ++ +   ++ ++A+LL + +P+    I  
Sbjct: 415 IWKVLTIANKAINDYEPWNLMKDGKNAEAMALVALITNIMAKVALLLDSVMPEKIKLIAQ 474

Query: 476 ILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            L +      F +L  ++ L    ++ K  + +FPR 
Sbjct: 475 SLGMNINTETFNNLIINKELLADTVITKV-EQLFPRI 510


>gi|328953224|ref|YP_004370558.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453548|gb|AEB09377.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 638

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/516 (40%), Positives = 307/516 (59%), Gaps = 14/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +  LYI+T I Y NA+PHIGHAY  ++AD LARFHRL G +  F TGTDEHG+K+ +A
Sbjct: 3   KPQPPLYITTPIYYVNAEPHIGHAYTTVLADTLARFHRLMGAETRFQTGTDEHGEKVVEA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  K +VDQ S  FR   D + ISYD FIRTT+  H    + +  K++ +GDIY 
Sbjct: 63  ARARGIPVKDYVDQISGRFRGTWDQMQISYDHFIRTTDPLHIQVVQYVLNKVNSQGDIYF 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y+G Y    E +  + E+    DG+  + Q  P  +++E  YFFR+S YQD L+ Y +
Sbjct: 123 SEYAGHYCYGCERFVLEREL---VDGKCPDHQVKPT-YVKEGNYFFRMSRYQDWLIEYIQ 178

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +H +FI P   RNEV+SF+K  L+DL +SR      WGI +P D  Y+ YVW DAL NYL
Sbjct: 179 THTDFIRPERYRNEVLSFLKEPLEDLCISRPRARVQWGIPLPFDDNYVTYVWFDALINYL 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY D       KFWPA  H+I KDIL+ H IYWP  L +  L     +  HG+    
Sbjct: 239 TGLGYPDQ--ALVKKFWPACQHLIAKDILKPHGIYWPTILKATGLEPYHHLNVHGYWQIG 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SK+LGNV++P  ++++ G+D +RYF +RE+  G D  + +D L  R+NADLAN +G
Sbjct: 297 QGKMSKTLGNVVEPQRLVKQYGLDQVRYFFLREMVYGLDAVFSEDALVGRINADLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL SRS++M+ K   G++P  G +  +DE + S+   V  +    +     H+AL ++  
Sbjct: 357 NLFSRSLAMVFKYRQGVVPEAGPYESADEELRSLAEMVRDDYLGYLPELEFHKALQRLWE 416

Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L+ E++RY    +PW+L K     R +TVLY  +E +R + ++L+  +P  A+++ + L 
Sbjct: 417 LIGEINRYIVVMEPWKLFKIQEQQRLNTVLYTILEGLRWVTVMLRPLLPASADRMREQLG 476

Query: 479 VAD---ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           ++    ++  F+ L   RL  G  L K   P+FPR 
Sbjct: 477 LSPDTWDSGLFELLTWGRLPTGVQLIKG-APLFPRL 511


>gi|269986151|gb|EEZ92464.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 483

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/470 (43%), Positives = 302/470 (64%), Gaps = 23/470 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+T I Y N +PHIGHAY  IIADV AR+HRL+   V F TGTDEHG KI KAA  
Sbjct: 2   EKFYITTPIYYVNDKPHIGHAYTTIIADVFARWHRLNNEKVFFLTGTDEHGGKIEKAANE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              T K  VD+ S+ ++   + L+ISYD FIRTT+K H +T +   KK+ +KGDIYKG Y
Sbjct: 62  KNKTPKELVDETSQKYKTTWEKLNISYDKFIRTTDKSHEETVKRFIKKVFEKGDIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y L DE Y  + E+     G+  +   + VQ ++EE YFF+LS Y+D++++    + 
Sbjct: 122 EGFYCLPDERYITESEL---VGGKCPDCGRD-VQKIKEEAYFFKLSKYKDQIINLI--NK 175

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             ILP +  NE+++ +K  LKDL +SRK+  WGIK P D  + +YVW DAL NYL+    
Sbjct: 176 GLILPEKNANEILNRLKGELKDLDISRKSVSWGIKFPLDESHSVYVWFDALLNYLSA--- 232

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           L+ PDGS+ K FWPAD+H++GK+I+ FH++ WPA L+SA+LPLPK + +HG+    G+K+
Sbjct: 233 LNWPDGSEFKEFWPADIHLVGKEIVWFHSVIWPAMLMSADLPLPKNILAHGWWTVDGKKM 292

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DPIE+ ++   DA RYFL+RE    +DG + +  LK+R+N +L + + NLV+
Sbjct: 293 SKSIGNVVDPIEIADKYSADAFRYFLLREKPTWEDGDFSEAALKERINGELMSNLSNLVA 352

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +++  K ++G I       E    I     +  +EI EN + + ++ AL  +   + +
Sbjct: 353 RVLTLAEK-FEGKI-------EGKPEIEDFIRK--EEIIENFEKKDLYSALNLIFEGIRK 402

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +++Y + ++PW+L+  N    + VLY ++E IR   I L+ F+P  A KI
Sbjct: 403 INKYVNDKEPWKLEGKN---LANVLYNSLEAIRIATIFLKPFMPSTAEKI 449


>gi|19745562|ref|NP_606698.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|25009357|sp|Q8P298|SYM_STRP8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19747684|gb|AAL97197.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 665

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|15674551|ref|NP_268725.1| methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|13621657|gb|AAK33446.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 666

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/482 (39%), Positives = 302/482 (62%), Gaps = 11/482 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYRQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRLVAHVIQPFMMETSAA 482

Query: 473 IF 474
           I 
Sbjct: 483 IM 484


>gi|71910158|ref|YP_281708.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|25009390|sp|Q9A178|SYM_STRP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71852940|gb|AAZ50963.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 665

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/482 (39%), Positives = 302/482 (62%), Gaps = 11/482 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYRQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRLVAHVIQPFMMETSAA 481

Query: 473 IF 474
           I 
Sbjct: 482 IM 483


>gi|269123753|ref|YP_003306330.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315079|gb|ACZ01453.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 624

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/508 (39%), Positives = 308/508 (60%), Gaps = 13/508 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA+PHIG AY  II DV+AR++ L G +V   TG DEHGQKI ++A+   
Sbjct: 4   FYITTPIYYPNAKPHIGTAYTTIICDVVARYNNLKGKNVRLITGIDEHGQKIQESAEKNN 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT + +VD+   +F ++ D+L+I Y +F+RTT  +H  T   + +K+ + GDIY G Y G
Sbjct: 64  VTPQQWVDKMKEDFINLWDILNIDYSEFVRTTSDKHKFTVGDIIRKVYENGDIYSGEYIG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +  + ++    DG Y      PV  M+E+ +FF+LS Y+DKLL +YE HP F
Sbjct: 124 KYSVSEETFVTESQL---VDGLYMGK---PVIDMKEKSFFFKLSKYEDKLLKFYEEHPNF 177

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  R+NEVISF+K GL+DLS+SR TF+WGI +  +  +I+YVW DAL +YLT  GY  
Sbjct: 178 IRPNNRKNEVISFIKQGLQDLSISRTTFNWGIPLELEKGHIVYVWFDALNSYLTAAGY-- 235

Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           N +     +W     +H++GKDILRFHAI WPA L++A + LP  +  HG+    G+K+S
Sbjct: 236 NSEIFDI-YWNNSEVVHMVGKDILRFHAIIWPAMLMAAGIKLPDVLAVHGWWTKDGQKMS 294

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DPI+ + + G+D  RYFL+RE   G+D  Y    + +R+N+DLAN +GNL++R
Sbjct: 295 KSLGNVVDPIDEVNKYGLDQFRYFLLREATFGQDADYSNMAVIQRINSDLANDLGNLLNR 354

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K +D ++       + D  I+++ S  L+ I            L  +   +S +
Sbjct: 355 VIGMQNKYFDSIVYGINELNDLDNEIINLWSETLKNIDIYYSEYNFSEMLKCIWKFISRL 414

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++Y D  +PW L K N   R  TVLY  ++ I ++A+L+   +P  + KI + L + ++ 
Sbjct: 415 NKYIDESEPWTLYKNNDMGRLKTVLYNLIDGIYKIAVLISPVMPDSSKKILNQLALEEKE 474

Query: 484 RCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
              +++ +  + P        + +FPR 
Sbjct: 475 LSLENIKEWGMYPENNKLNKAEVLFPRI 502


>gi|218295116|ref|ZP_03495952.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244319|gb|EED10844.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 619

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 297/486 (61%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LARFHRLDG    F TGTDEHG+ + +AA+ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARFHRLDGYRTYFLTGTDEHGETVYRAAERAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   ++L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSERFKKAWELLGIAYDDFIRTTEERHKRVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+   E  YFFR+  Y++ LL Y ++HP+ 
Sbjct: 125 LYCVSCERFYTEKELSEG----LCPIHGRPVERRREGNYFFRMEKYREWLLDYLKAHPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   R+EV+S +   + DLS+SR      WGI +P D +++ YVW DAL NY++    
Sbjct: 181 IRPEGYRSEVLSMLSEPIGDLSISRPKSRVPWGIPLPWDEEHVTYVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD PDG K + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPDGEKYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  + E  G DALRY+L+REI  G+D    ++ L+ R  +DLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFSLAERYGRDALRYYLLREIPYGQDTPVSEEALRTRYESDLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G +P P    E +E +  +  R+   +RE       H AL +V++ V 
Sbjct: 358 QRTRAMLFRFAEGRVPEPVPGEELEEGV-GLPGRLRTLVRELK----FHVALEEVMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + ++PWEL K +P  A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKRPWELYKKDPKEAQAVLYRVVEGLRIASILLTPAMPGKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|157737467|ref|YP_001490150.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157699321|gb|ABV67481.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 650

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/517 (39%), Positives = 320/517 (61%), Gaps = 14/517 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  K +YI+T I Y N   HIGHAY  IIAD+LAR+ RL G +    TGTDEHGQKIA
Sbjct: 1   MQESCKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGSNTFLLTGTDEHGQKIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           ++A+    T K + D+ S  FR + D  DI+YD FIRTT++ H    +  ++ +  KGDI
Sbjct: 61  QSAEIRNKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G+Y +  E ++ + ++    D Q+          ++EE YFF LS Y++KLL +
Sbjct: 121 YKGEYEGFYCVPCETFFPESQL---VDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKW 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALT 236
           YE + + ILP  ++NE+++FVK GLKDLS+SR +F WG+K+P+   +P+++MYVW+DAL 
Sbjct: 178 YEENEDCILPRSKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALL 237

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D     FWPA++H++GKDILRFH+IYWPAFL+S +LPLPK + +HG+ 
Sbjct: 238 NYITALGY--GTDDKNMNFWPANIHLVGKDILRFHSIYWPAFLMSLDLPLPKHIAAHGWW 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKS GN+++P EV +  G+DA RYF++RE+  G+DG + +  L  R+N+DL N
Sbjct: 296 TRDGEKMSKSKGNIVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALIDRINSDLGN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL++R   M  K +D  + +     +  +  L   + +L  +++ + N  I+R L +
Sbjct: 356 DLGNLLNRISGMSGKYFDYKVSSVDV-EKFHKKELDEVNEILDGVQKYIYNMQINRYLEE 414

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  +++  ++  +  +PW L K   +  A  ++ +   ++ ++A+LL + +P+    I  
Sbjct: 415 IWKVLTIANKAINDYEPWNLIKDGKNAEAMALVALITNIMAKVALLLDSVMPEKIKLIAQ 474

Query: 476 ILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            L +      F +L  ++ L    ++ K  + +FPR 
Sbjct: 475 SLGMNINTETFNNLIINKELLADTVITKV-EQLFPRI 510


>gi|158335466|ref|YP_001516638.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305707|gb|ABW27324.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 532

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/480 (39%), Positives = 285/480 (59%), Gaps = 8/480 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  ++T + Y N  PHIG AY  + AD +ARFHRL G +VL  TGTDEHGQKI + A
Sbjct: 5   QTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRTA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G   +   D+    ++D+   L+I YD F RTT  RH       ++++ DKGDI +G
Sbjct: 65  EQRGKAPQDHCDEIVAGYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQG 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              GWY +  E +  + ++    +  +      PV+W +E+ YFFRLS YQD LL  +  
Sbjct: 125 HQQGWYCVGCEEFKEERDLL---EDNHCPIHKRPVEWRDEQNYFFRLSKYQDDLLQLFAD 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+FI P  RRNEV+SFV+ GL+D S+SR   DWG  +P D Q+ +YVW DAL  Y+T  
Sbjct: 182 QPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTAL 241

Query: 243 GYLDNP---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              D     D + +++WP +LH+IGKDILRFHA+YWPA L+SA+LPLP +VF HGF+   
Sbjct: 242 LDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTKD 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+ KSLGN +DP+E+++  G DA+RY+ ++ +  G+DG + +      VNADLAN +G
Sbjct: 302 GQKMGKSLGNTLDPVELVDRYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSLG 361

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R++ M +K  +G +P     +   D  +  +  +   ++ +  QN    +A    +
Sbjct: 362 NLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKAGDQVAKAYQNLNFSQACNISL 421

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LV   +++ D Q PW L KK      + +LY  +E +R  A LL   +P L+ +I+  L
Sbjct: 422 GLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQL 481


>gi|319939574|ref|ZP_08013933.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811163|gb|EFW07469.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 679

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/520 (38%), Positives = 309/520 (59%), Gaps = 14/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI + A+
Sbjct: 17  EKNFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQKAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G 
Sbjct: 77  EAGIIPQAYVDSMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGE 136

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++   G+         + V+W+ EE YF RL  Y D+L+
Sbjct: 137 YSGWYSVSDEEFFTESQLAEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLV 196

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL 
Sbjct: 197 EFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALL 256

Query: 237 NYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           NY T  GY  +   +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ +HG
Sbjct: 257 NYATVLGYGQDDHANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLIAHG 316

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 317 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 376

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG +P      TE D  + +V +  +    + M      RA
Sbjct: 377 ANDLGNLLNRTVAMINKYFDGQVPIYKENVTEFDADLAAVVAENIAIYHKQMDAVDYPRA 436

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K     D  + V+   V  +R +A L+Q F+   +N
Sbjct: 437 LEAVWNIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLVASLRVVAHLIQPFMMTTSN 496

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            I + L +   +   ++LD   L  G  +     PIFPR 
Sbjct: 497 AIMEQLGLG-TDFDLENLDLAELPTGLTVVAKGTPIFPRL 535


>gi|124802884|ref|XP_001347624.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23495207|gb|AAN35537.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 889

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/478 (39%), Positives = 294/478 (61%), Gaps = 13/478 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  YI+TAI Y N  PHIGHAYE+++AD +AR+H++ G D  FTTG DEHG KIA  A
Sbjct: 221 KNETFYITTAINYVNGDPHIGHAYEIVLADAIARYHKIIGRDTFFTTGADEHGLKIANQA 280

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T K   D+N   F+++  +L +  D ++RTT   H    + +W K    GDIY G
Sbjct: 281 AKNNMTPKELCDKNVLKFQNLNKLLYVEDDYYVRTTRDSHKKIAQEVWDKCEKNGDIYLG 340

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWY++R+E Y  ++E        Y +  +N  ++ M+E  YFF++S YQDKL+ Y +
Sbjct: 341 EYEGWYNVREETYVPENE---AKLMNYIDPLNNIKLEKMKEPSYFFKMSKYQDKLIEYIQ 397

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S+P++I P ++RNE++  +K  L DLS SR  F WGI++P+DP+++MYVW+DAL NY ++
Sbjct: 398 SNPDYIQPEQKRNEILQRLKEPLADLSCSRTKFTWGIQVPNDPKHVMYVWMDALINYYSS 457

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-G 300
                  D  K K+WPA++H+IGKDI  FH + +P  LLSAN+PL K VFSHGF+L   G
Sbjct: 458 CFI----DEGKKKYWPANVHIIGKDITWFHTVIFPTILLSANIPLSKSVFSHGFVLAADG 513

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGNVI+P+E+I++ G DA RY +++E   G D  +D D L    N+DLA+ IGN
Sbjct: 514 KKMSKSLGNVINPLEIIDKYGADAFRYHVIKETKRGCDTRFDVDNLVDMCNSDLADTIGN 573

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVIS 419
           LV R++S+     +  IP   AF    E  L +     +  +  +M+   + +   + + 
Sbjct: 574 LVQRTLSLCQLCNESKIP---AFYPEYEIHLPIDILHFINRVEYHMKTFCVQKCCEKSVQ 630

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  +++++     PW+ K    ++   ++ + +E I  +A  L  F+P L++KIF+ L
Sbjct: 631 VCKDLNKFLTDMAPWKYKDDLKNKKLHIIRIMLEAIYFIAHYLDIFIPSLSHKIFEKL 688


>gi|154337126|ref|XP_001564796.1| methionyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061834|emb|CAM38870.1| putative methionyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 752

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/504 (40%), Positives = 291/504 (57%), Gaps = 27/504 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + ++ I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 207 KKQKTFFATSPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 266

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+T  F    S  F+     ++   + FIRTT   H      +WKK+  KGDIY 
Sbjct: 267 AAKQGVSTMDFTTSVSNEFKQCFKEMNYDMNYFIRTTNPMHEKLVGDIWKKLEAKGDIYL 326

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP----------VQWMEEEGYFFRLSA 171
           G Y GWYS+ DE++     V    D        NP          V W+ EE Y FRLSA
Sbjct: 327 GKYEGWYSVSDESFLTAQNVADSVD-----KDGNPCKISLESGHVVTWVVEENYMFRLSA 381

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIM 228
           ++++LL ++  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +
Sbjct: 382 FRERLLKHFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKCESVMNWSIPVPGDDRHCI 441

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAIYWPAFLL 280
           YVW+DAL +Y   +      DG++A          WPADL V+GKDIL+FHAIYWPAFL+
Sbjct: 442 YVWLDALFSYYVGSIVRVAADGTEALDEDYRTLSRWPADLQVVGKDILKFHAIYWPAFLM 501

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           SA+LPLP+++ SHG+     +KISKSLGN  DP+E   E G+DA +YFL+RE     DG 
Sbjct: 502 SADLPLPERLVSHGWWTKDHKKISKSLGNAFDPVEKANEFGIDAFKYFLLRESNFQDDGD 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           Y    +  R+N +LA+ +GNLVSR V+  + +  G+ P P  + E+D ++++  + +   
Sbjct: 562 YSDRNMVARLNGELADTLGNLVSRCVTPKI-NVGGVWPEPAEYNETDRTLIASLNNLAGT 620

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +        I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   +
Sbjct: 621 VDHYYCLPDIQNALIAIFDVLRSLNVYVTDNAPWKLVKTDTARLGTVLYVTMEGLRICNM 680

Query: 461 LLQAFVPKLANKIFDILFVADENR 484
            LQ  +P+ A +I D L V +  R
Sbjct: 681 FLQPVMPQKAKEIMDALGVPEGVR 704


>gi|75908935|ref|YP_323231.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702660|gb|ABA22336.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 530

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 293/485 (60%), Gaps = 15/485 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  + AD +ARF +L G DVL  TGTDEHGQKI ++
Sbjct: 6   KSEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F D+   +F  +  +L+I YD F RTT  RH       + ++   GDIY+
Sbjct: 66  AESLGKAPQEFCDEIVPSFMSLWQLLNIQYDRFSRTTAVRHKAIVDEFFARVWQAGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G     +   +  V+W +E+ YFFRLS YQ +L  +Y+
Sbjct: 126 GQQKGWYCVSCEEFKEERELLEGNRCPIH--VNKEVEWRDEQNYFFRLSKYQTQLEEFYK 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP+FI P  RRNEV++FV  GL+D S+SR   DWG  +P D ++ +YVW DAL  Y+T 
Sbjct: 184 SHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPTDSKHTLYVWFDALLAYVT- 242

Query: 242 TGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
              LD  D      + AK+WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+
Sbjct: 243 -ALLDPQDEPTLENALAKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFL 301

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+ KSLGN IDP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN
Sbjct: 302 TKDGQKMGKSLGNTIDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLAN 361

Query: 357 GIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            +GNL++R+++M+ K   +Y   I       E+    L V   +  ++++  +    ++A
Sbjct: 362 DLGNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGV--DLGAKVKQAYEVLAFNQA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
              V+SLV   +++ D Q PW L K+       TVLY  +E +R  A LL   +P +++ 
Sbjct: 420 CGVVLSLVQASNKFIDDQAPWSLYKQGRQQEVETVLYTVLESVRLAAYLLSPVIPNISSS 479

Query: 473 IFDIL 477
           I+  L
Sbjct: 480 IYQQL 484


>gi|71902998|ref|YP_279801.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71802093|gb|AAX71446.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 666

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/518 (37%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D     +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADFSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 665

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 305/482 (63%), Gaps = 11/482 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A 
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ +D+  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGISPQTYVDNMAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL 
Sbjct: 182 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 242 NYATALGYGQMDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D+LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDSLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  + M++    RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLVDYHKYMESVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A  ++V+      +R +A L+Q F+ + +  
Sbjct: 422 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 481

Query: 473 IF 474
           I 
Sbjct: 482 IM 483


>gi|154175104|ref|YP_001407916.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803429|gb|EAU00773.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 636

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/510 (41%), Positives = 310/510 (60%), Gaps = 10/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK+YI+T I Y N  PHIGHAY  IIAD  ARF RL G    F TGTDEHGQKI +AA+
Sbjct: 2   KEKVYITTPIYYVNDVPHIGHAYTTIIADTFARFKRLQGHPTYFMTGTDEHGQKIEQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T K + D+ S  FR + D  +ISYD FIRTT++ H  T + ++ K+   GDIYKG 
Sbjct: 62  ARGKTPKEYADEISAKFRTLWDEFEISYDHFIRTTDEEHKLTAQNVFSKMQANGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y +  E ++   ++    D             ++EE YFFRLS YQD LL +Y++ 
Sbjct: 122 YEGFYCVSCETFFTATQLL---DDNCCPDCGRKTSIVKEESYFFRLSKYQDALLKWYKND 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240
              ++P  ++NEV+SFVK GLKDLS++R +FDWG+K+P   +DP+++MYVW+DAL NYLT
Sbjct: 179 ELCVIPRGKKNEVVSFVKGGLKDLSITRTSFDWGVKLPASANDPKHVMYVWLDALVNYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           T GY  + D +   FW    H++GKDILRFHA+YWPAFL+S NL LPK V +HG+    G
Sbjct: 239 TLGY--SRDDALMDFWQNTTHIVGKDILRFHAVYWPAFLMSLNLALPKHVAAHGWWTRNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNVIDP EV +  G++  RYF++RE+  G+DG + +  L +R+N++L NG+GN
Sbjct: 297 EKMSKSKGNVIDPREVAKAYGLENFRYFMLREVPFGQDGDFSQKALIERINSELGNGLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R + M  K  +  I         +  +    + +   I EN++    +R L ++  +
Sbjct: 357 LLNRIIGMSGKYSEFKIDASNVAKFYNAELEEAHAHLKSAI-ENLEVLATNRYLEELWKV 415

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V+  +      +PW + K+     A+ ++ ++  ++ ++A+LL   +PK A KI + L  
Sbjct: 416 VTLANGVIAKYEPWAMIKEGKTTEANALVALSANLLAKVAVLLSPAMPKTAGKIAEALSF 475

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               R F+ L         + K  +P+FPR
Sbjct: 476 EINERSFKDLVLDNGVQNFISKPTEPLFPR 505


>gi|257066998|ref|YP_003153254.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798878|gb|ACV29533.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 648

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/501 (40%), Positives = 308/501 (61%), Gaps = 30/501 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI +
Sbjct: 1   MTEKKAYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLKGFDAYLTTGTDEHGQKIMR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AG + + FVD  +   +++   L+I YD FIR+TE +H      ++ K+ +KGDIY
Sbjct: 61  TALDAGTSPQKFVDIIAEETKELWKKLEIDYDTFIRSTEDQHEKDVAEIFTKLYEKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
           KG Y G+Y    E ++ + ++  G         H P     V++ EEE YFFRLS Y D+
Sbjct: 121 KGEYKGYYCTPCETFWTESQLEDG---------HCPDCGREVEYQEEETYFFRLSKYTDR 171

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L   ++ HPEF+ P  R+ E+++ F+  GL DLS++R +FDWG+ +P D ++++YVWIDA
Sbjct: 172 LKELFKEHPEFLEPQFRQKEMLNNFIDKGLSDLSVTRNSFDWGVDVPFDNEHVVYVWIDA 231

Query: 235 LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           L+ YL+  GY D+    KAKF   WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF
Sbjct: 232 LSCYLSAIGYGDD----KAKFERYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVF 287

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+IL   +K+SKS GN++ P  +++  GVDAL+++++RE   G DG +      +R N
Sbjct: 288 AHGWILFDNDKMSKSKGNIMYPEPLVDLYGVDALKFYMLREFNFGSDGNFSARKYMERYN 347

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLI 410
           +DL N +GNLVSR+ SMI K Y+G     G  ++S D+ ++++      +  + M     
Sbjct: 348 SDLVNDLGNLVSRTTSMIAK-YNGGEVRKGTVSDSFDDELITLAEETYTKFNKLMDEFNF 406

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           + AL  V +L+   ++Y D  +PW L +   N +R   VLY   E IR +A L++   P 
Sbjct: 407 NAALEAVWTLIRRANKYVDETEPWILGRDEANKERLDRVLYNLAETIRIVAQLIE---PV 463

Query: 469 LANKIFDILF-VADENRCFQS 488
           + N    IL  +  +N+ F+S
Sbjct: 464 MKNTTATILEKIGTDNKGFES 484


>gi|145346067|ref|XP_001417517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577744|gb|ABO95810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 573

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/480 (42%), Positives = 292/480 (60%), Gaps = 17/480 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  ++TAI Y N  PH+GHAYE I  DVLAR+HR  G  VLF TG+DEHGQKIA+AA+ 
Sbjct: 74  ERFSVTTAINYANGAPHMGHAYESISTDVLARYHRAYGRQVLFQTGSDEHGQKIAEAAEE 133

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    FVD +   F+++   LD+S D + RTT + H   C  L+++  D GDIY   Y
Sbjct: 134 KGMAPLAFVDTHVAEFQNLNKRLDVSNDVYNRTTSEAHKKACAELFRRSRDNGDIYLDTY 193

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++R+E +  + E    A G         ++ M+EE YFF+ S YQ +L+++ ES+P
Sbjct: 194 EGWYNVREETFVTESEAQ--ASGYKDPVSGKDLKKMKEESYFFKQSRYQKQLIAHIESNP 251

Query: 185 EFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  RRNE+++ +++  L+DLS+SR TFDWGI +PD P+++MYVW DALTNYLT TG
Sbjct: 252 EFIQPSSRRNEILARLQNDDLRDLSVSRTTFDWGIPVPDAPKHVMYVWFDALTNYLTGTG 311

Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
           +   P+ ++ K FWPA +H+IGKDI+ FH + WP  L SA LPLPK VF HGF+    G+
Sbjct: 312 W---PEETENKDFWPASVHIIGKDIIWFHCVIWPCMLWSAGLPLPKTVFGHGFVTADDGQ 368

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP +V++    D  RY+L+R    G D  + +  +    NADLA+ IGNL
Sbjct: 369 KMSKSIGNVVDPNDVLKRFSSDTFRYYLMRCGVYGADVPFSEPAMIAIHNADLADVIGNL 428

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V R  ++  K+  G+IP   +     E++ SV   VL+   E   ++  I  A    I  
Sbjct: 429 VHRVTNLCKKNCGGIIPDCAS-----ENVFSV--GVLRAKSEAAMSRFNIQGACELAIEA 481

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y     PW +K     +R S ++  T+E +      LQ +VPK    +F+ L V
Sbjct: 482 IKCTNKYLTDSAPWAVKGEGAEERKSVIIKSTLEAVYVAMHFLQPYVPKACGLVFEKLGV 541


>gi|212702582|ref|ZP_03310710.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
 gi|212674023|gb|EEB34506.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
          Length = 654

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 297/478 (62%), Gaps = 13/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA+PH+GHAY  I+AD L+RFH+  G + +F TGTDEHG KI KAA+ 
Sbjct: 2   KNFYITTPIYYVNAKPHLGHAYTTIVADSLSRFHKTLGDNTMFLTGTDEHGDKIVKAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K FVD  S  F+ +   L I  D F+RTT++ H    +   +++ D GDIY G +
Sbjct: 62  QGVSPKEFVDGISGLFQQLWPHLGIENDAFVRTTDEDHKARVQRFLQQVYDAGDIYFGEF 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G   Q+        +++ E+ YFFR+S Y   L  Y ESHP
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQHLTKP----EFISEKNYFFRMSKYLPWLREYIESHP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALLNYISA 237

Query: 242 TGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PDG K K FWP + H++ KDIL+ HA++WP  L +A LP+ + +  HG+ L + 
Sbjct: 238 LGW---PDGEKYKTFWPGE-HLVAKDILKPHAVFWPTMLKAAGLPMYQHLNVHGYWLVRD 293

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV++P+E+ ++ G+DA RYFL+RE+  G D  + ++G+  R+NADLAN +GN
Sbjct: 294 TKMSKSLGNVVEPLEMRQKYGLDAFRYFLLREMHFGSDASFSEEGMVTRINADLANDLGN 353

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR +SM  K ++  +P PG F+E D++I+ +C+  +    +   N    + L  +  L
Sbjct: 354 LFSRVLSMTAKYFESKVPQPGEFSEDDKAIVELCATAMTNYIQLFGNTQFAQGLDSLWDL 413

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  +++Y D+Q PW L K+ +  R  TV+YV +  +R++A+ L A +P  +  + + L
Sbjct: 414 VRALNKYVDSQAPWTLFKQGDTMRLGTVMYVLLSAMRKVALCLWAVMPDASRTLLEQL 471


>gi|296271126|ref|YP_003653758.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093913|gb|ADG89865.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 530

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 297/493 (60%), Gaps = 12/493 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V F TGTDEHGQKI + A+  G
Sbjct: 14  FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGERVWFLTGTDEHGQKIMRTAEANG 73

Query: 67  VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            T + + D+     ++ + + L+I+ DDFIRTTE RH    +   + + DKG+IYKG Y 
Sbjct: 74  TTPQEWCDKLVETAWKPLWEHLEIANDDFIRTTEPRHTKRVQEFVQDLYDKGEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E Y +  E+    +G+       P++W++EE YFFRLSAY  +LL +YE +P+
Sbjct: 134 GPYCVGCEEYKSPGELL---EGELCPIHKRPIEWLKEENYFFRLSAYGQRLLEHYERNPD 190

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P   RNEV+ FV+ GL+DLS+SR TF WGI IP DP++++YVW+DAL NY+T  GY 
Sbjct: 191 FIQPASARNEVVQFVRQGLQDLSISRSTFTWGIPIPWDPKHVIYVWVDALLNYVTAVGYG 250

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + +  ++  WPAD+H++GKDILRFHA+ WPA L++  LPLPKK+F++G+++  GEK+SK
Sbjct: 251 SDEEKFRST-WPADVHLVGKDILRFHAVIWPAMLMANGLPLPKKIFANGWLMVGGEKMSK 309

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S    I P ++    GVDA RY+ +R I  G+DG +  +    R  ++LAN  GNL SR 
Sbjct: 310 SNLTGISPRDLTGTFGVDAYRYYFLRAIPFGQDGSFSWEDFAARYTSELANDFGNLASRV 369

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
            +M+ K + G +P       ++++I    +   ++    + + L     +  +   + +V
Sbjct: 370 AAMVGKYFGGTLPEATDAGPAEQAIADGLAAAAEQADRMIGDNLDFSGGIGAIFDFIKQV 429

Query: 425 DRYFDAQKPWELKKTN-PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + Y   Q+PW++ K + P+   R +T+LY   E +R +A+LL   +P    K++  L   
Sbjct: 430 NGYLTEQQPWKVAKDDSPEARARLATILYTAAEALRGIAVLLNPVMPVACAKLWASL--G 487

Query: 481 DENRCFQSLDQRL 493
            E       DQR+
Sbjct: 488 AEPHLGPLADQRI 500


>gi|325679112|ref|ZP_08158706.1| methionine--tRNA ligase [Ruminococcus albus 8]
 gi|324109236|gb|EGC03458.1| methionine--tRNA ligase [Ruminococcus albus 8]
          Length = 659

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/478 (39%), Positives = 301/478 (62%), Gaps = 12/478 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YP+  PHIGH Y  +  D +AR+ R+ G DV+F TGTDEHGQKI   A++ 
Sbjct: 3   KFYITTPIYYPSGDPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGQKIEDKARDK 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT + +VD+    F+ +   ++ISYD +IRTT+  H ++ + ++K++ DKG IYKG Y+
Sbjct: 63  GVTPQQYVDEVVATFKKLWSYMNISYDRYIRTTDDYHVESVQKIFKELYDKGYIYKGEYT 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E+++ + ++   ADG      H PV+   EE YFF++S + D++     +  +
Sbjct: 123 GKYCTPCESFWTESQL--DADGCCPEC-HRPVKEASEEAYFFKMSPFADRIEKLL-TETD 178

Query: 186 FILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           ++ P  R  E++ +F+K GL+DL +SR +F WGI +  DP++++YVW+DAL+NY T  GY
Sbjct: 179 YLRPKTRATELVNNFIKPGLEDLCVSRTSFTWGIPVTFDPKHVVYVWVDALSNYCTALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK----- 299
            +N      K+WPAD+H++ KDI+RFHAI WPA L++ + PLPK +  HG+I  +     
Sbjct: 239 KNNKYNDYDKYWPADVHMVAKDIMRFHAIIWPAILMALDEPLPKHLAVHGWITFQNKNGE 298

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKSLGNV+DP  + E  GVDA+RY ++RE+A G D  +  + +  R+N+DLANG G
Sbjct: 299 AQKMSKSLGNVVDPFMLGERYGVDAIRYHILREMALGADSAFSNEIMINRINSDLANGFG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+V+M  K + G +P      + D+S+      V +++ + +    +  AL ++  
Sbjct: 359 NLVSRTVAMADKYFGGTLPETRLEGDFDQSLKDCLLSVREKVDKCIDETRLKNALEEIFV 418

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V   ++Y D  +PW L K  +  DR ++VLY  +E IR ++ LL AF+P    ++++
Sbjct: 419 AVDRANKYIDETEPWVLGKDESKYDRLASVLYNLLESIRIISTLLSAFMPTTMPEVWE 476


>gi|268610250|ref|ZP_06143977.1| methionyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 661

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/517 (38%), Positives = 312/517 (60%), Gaps = 15/517 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+  PHIGH Y  +  D +AR+ R+ G DV+F TGTDEHG KI + A 
Sbjct: 3   KKPFYITTPIYYPSGNPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGLKIEQKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K +VD     F+++   ++ISYD +IRTT+  H +  + ++K + DKG IYKG 
Sbjct: 63  EQGVTPKEYVDVIVDRFKNLWKYMNISYDRYIRTTDDYHVEAVQKIFKALYDKGYIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSG Y    E+++ D ++    +       H PV++ +EE YFF++S + D++       
Sbjct: 123 YSGKYCTLCESFWTDSQL---DENGCCPECHRPVKYAKEEAYFFKMSPFADRIEKLL-LE 178

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            +++ P  R  E++ +F+K GL+DL +SR TF WG+ +  D ++++YVWIDAL+NY+T  
Sbjct: 179 TDYLRPKTRAVELVNNFIKPGLEDLCVSRTTFKWGVPVSFDDKHVVYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-- 300
           GY ++      K+WPAD+H++ KDI+RFHAI WPA L++  +PLPK +  HG+I   G  
Sbjct: 239 GYENSAYNDYEKYWPADVHMVAKDIMRFHAIIWPAMLMALEIPLPKHLAVHGWITMAGKN 298

Query: 301 ---EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              EK+SKSLGNV+DP  + E  G DA+RY ++RE+A G D  +  + +  R+N+DLANG
Sbjct: 299 GESEKMSKSLGNVVDPFVLGERYGQDAIRYHILREMALGADSLFSNEIMINRINSDLANG 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNLVSR+V+M+ K + G IP+       DE   +V   +L E+ + +    + +AL  +
Sbjct: 359 FGNLVSRTVAMVDKYFGGTIPSEREDDALDEEFRNVILGLLPEVDKYVDETKLKQALETI 418

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS  ++Y D  +PW+L K    +A  ++VLY  +E IR  + LL  F+P    K+++
Sbjct: 419 FEGVSRANKYIDETEPWKLGKDESKKARLASVLYNLLEAIRITSALLAPFMPTTMPKVWE 478

Query: 476 ILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +  +  +  +  LD+   L     +HK  + +FPR 
Sbjct: 479 QIGASGADVEYSKLDKFGVLPENVTVHKG-EILFPRI 514


>gi|322389048|ref|ZP_08062615.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144247|gb|EFX39658.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 663

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/524 (38%), Positives = 314/524 (59%), Gaps = 25/524 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +HG+ 
Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIAHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412
            +GNL++R+V+MI K Y G +P   A+ E+    D  +  V    + E  + M      R
Sbjct: 363 DLGNLLNRTVAMINKYYGGQVP---AYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPR 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +
Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKDQLAAVMAHLAASLRVVAHLIQPFMMNTS 479

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
           N I + L +  +      L+     GF  + T      PIFPR 
Sbjct: 480 NAIMEQLGLGLDF----DLENLTLAGFPENVTVVAKGTPIFPRL 519


>gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 666

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 304/485 (62%), Gaps = 11/485 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A 
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ +D+  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGISPQTYVDNMAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL 
Sbjct: 183 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 243 NYATALGYGQMDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLADYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A  ++V+      +R +A L+Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 482

Query: 473 IFDIL 477
           I   L
Sbjct: 483 IMTQL 487


>gi|224373264|ref|YP_002607636.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589648|gb|ACM93384.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 635

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/515 (40%), Positives = 311/515 (60%), Gaps = 26/515 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PHIGHAY  IIAD++AR+ RL G+D  F TGTDEHGQKI +AA+  G 
Sbjct: 9   YLTTPIYYVNDIPHIGHAYTTIIADMVARYSRLKGIDTFFLTGTDEHGQKIEEAAKKRGK 68

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K + D+ S  F+ + D  +ISYD FIRTT++ H    +  +  +  KGDIYK  Y G 
Sbjct: 69  SPKEYADEISGKFKALWDEFEISYDKFIRTTDEAHKKGVQKAFLDMYKKGDIYKDYYEGH 128

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E++    ++    + +       P + ++EE YFFRLS YQD+LL + ++    I
Sbjct: 129 YCVSCESFVAPSQL---VNDELCPDCGKPTRIIKEESYFFRLSKYQDQLLDWLKNKKP-I 184

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  + NEVI FV+ GLKDLS++R +F+WG+K+P   +DP++++YVW+DAL NYLT  GY
Sbjct: 185 LPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPPEINDPKHVVYVWLDALFNYLTALGY 244

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D    K+WPA LH++GKDIL+FHA+YWPAFL+S    LPK + +HG+    GEK+S
Sbjct: 245 GSENDELVKKYWPAKLHIVGKDILKFHAVYWPAFLMSIGYELPKVIAAHGWWTRDGEKMS 304

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +V +  G++  RYF++RE+  G DG + +  L  R+N DL N +GNL++R
Sbjct: 305 KSKGNVINPKDVADAYGLENFRYFMLREVPFGADGDFSEKALIDRINNDLGNDLGNLLNR 364

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--------QLIHRALAQ 416
            + M  K +DG I        + +++    +  L E RE ++N          IH+ L +
Sbjct: 365 IIGMAYKYFDGKI--------TSKNVEKYYANELNEAREIVKNLEETYLWKMQIHKFLEE 416

Query: 417 VISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  +++  ++  D  KPWEL K    ++A  +L +   ++  +A+ L A +PK   KI  
Sbjct: 417 LWKVLAIGNKAIDTYKPWELMKNGEEEKAQALLGLISNLLAMVAVNLHAVMPKTTAKIAK 476

Query: 476 ILFVADENRCFQS-LDQRLKPGFMLHKTFDPIFPR 509
            L        F++ +D +L   F++ K   P+FP+
Sbjct: 477 SLGFEINQESFKNIMDGKLLDDFVIEK-IPPLFPK 510


>gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 665

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 303/482 (62%), Gaps = 11/482 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A 
Sbjct: 2   KKTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYEVFYLTGLDEHGQKIQTKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ +D+  +LDISY+ FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGISPQTYVDNMAKDVKDLWQLLDISYNKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL 
Sbjct: 182 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 242 NYTTALGYGQTDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  + M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLADYHKYMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A  ++V+      +R +A L+Q F+ + +  
Sbjct: 422 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 481

Query: 473 IF 474
           I 
Sbjct: 482 IM 483


>gi|320009832|gb|ADW04682.1| methionyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 537

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/495 (40%), Positives = 298/495 (60%), Gaps = 10/495 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   
Sbjct: 17  FYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANN 76

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DK  IYKG Y 
Sbjct: 77  VTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLFDKDQIYKGGYE 136

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           G Y +  E Y    ++ +  DG      H  PV+ ++EE YFF+LS Y  KL+ +Y ++P
Sbjct: 137 GPYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVELLKEENYFFKLSEYGPKLMEFYAANP 196

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P   RNE+++FVK GL+DLS+SR TFDWG+ +P DP++++YVWIDAL NY T  GY
Sbjct: 197 DFIQPESARNEIVNFVKQGLQDLSISRSTFDWGVPVPWDPKHVIYVWIDALLNYATAVGY 256

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N +     F PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GEK+S
Sbjct: 257 GANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGEKMS 315

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS    I P ++    GVDA R++ +R IA G DG +  +    R  ++LAN  GNL SR
Sbjct: 316 KSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLASR 375

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
             +M+ K +DG +P   A  +++ ++    +R +      +  +L     +  +   V +
Sbjct: 376 VAAMVGKYFDGALPEATAAGDAERAVQEGLARAVATADARIGEELDFQGGILAIFDFVKQ 435

Query: 424 VDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V+ Y   Q+PW++ K T+P+   R + +LY   E +R +A+LL + +P  + K++D L  
Sbjct: 436 VNGYITEQEPWKVAKDTSPEGQARLAAILYTAAESLRGVAVLLNSVMPDTSQKLWDSL-- 493

Query: 480 ADENRCFQSLDQRLK 494
             E       DQR++
Sbjct: 494 GAEASLGALADQRVQ 508


>gi|291530000|emb|CBK95585.1| methionyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 642

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 298/485 (61%), Gaps = 8/485 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+  PHIGH Y  +  D +ARF R+ G DV+F TGTDEHGQKI   A   GV
Sbjct: 6   YLTTPIYYPSGNPHIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAEKGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+   NF+ + + + ISYD FIRTT+  H +T + +++K+ +KG IYKG Y G 
Sbjct: 66  TPKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFRKLYEKGYIYKGTYKGK 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     V+   EE YF RLS + DK+  +  +  +++
Sbjct: 126 YCTPCESFWTESQL---VDGKCPDCGRE-VKEANEEAYFLRLSDFADKIEKFL-TETDYL 180

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R NE+++ F+K GL+DL +SR +F WGI +  D ++++YVW+DAL+NY++  GY +
Sbjct: 181 QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDALSNYISALGYGN 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  K+WPAD+H+  K+I+RFH+I WP  L+  +LPLPK ++ HG+I   G+K+SKS
Sbjct: 241 EKYNDFEKYWPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHLYGHGWINFNGDKMSKS 300

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP  + E  GVDA+RY ++R++  G D  +  + +  R+NADLAN +GNLVSR+V
Sbjct: 301 KGNVVDPFVLCERYGVDAVRYQILRDMPYGSDCNFTNELMLTRINADLANDLGNLVSRTV 360

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M  K + G +PT  A  E D  ++ +   +   +   ++     +AL ++  ++S  ++
Sbjct: 361 AMADKYFGGTLPTDRASDELDNQLIGMAQSLCDTVTPLIEQAQHSKALEEIFKVISRANK 420

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K  +N  R +TVLY  +E IR  + LL  F+P    ++++ +    E+ 
Sbjct: 421 YIDETAPWVLAKDESNNARLATVLYNLLETIRICSALLSPFMPATMPEVWEQIGAGAEDT 480

Query: 485 CFQSL 489
            F  L
Sbjct: 481 AFDKL 485


>gi|218461098|ref|ZP_03501189.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 272

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 166/272 (61%), Positives = 218/272 (80%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY
Sbjct: 61  TARAEGIEPQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHA 272


>gi|320106556|ref|YP_004182146.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319925077|gb|ADV82152.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 709

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/559 (37%), Positives = 309/559 (55%), Gaps = 65/559 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++T I Y NA+PHIGHAY  + AD +AR  RL G D  F TGTDEHGQKI ++A
Sbjct: 4   KKDKFYLTTPIYYVNARPHIGHAYTTLTADTIARRKRLQGFDTYFLTGTDEHGQKIQRSA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+  + F DQ S  FR + D + ++YD +IRTT++ H    + L+  + ++G I   
Sbjct: 64  EAAGIPPQQFADQVSEQFRALWDRMGVTYDQYIRTTDEAHKRGAQKLFTTLYERGFIELR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+G YS+ +E +        G DG+         + + EE +FF+LS +Q +L+    S
Sbjct: 124 SYTGQYSIGEEMFVEGPPGTIGPDGKL-------TETVTEENFFFKLSEFQTQLIDLIGS 176

Query: 183 HPEFILPIERRNEVISFVK--------------------SGLKDLSLSRKTFDWGIKIPD 222
           +   I P  R+NEV+SF++                      L+DLS+SR +F WGI +P+
Sbjct: 177 NELEITPEARKNEVLSFLRGNVNDTDATAVSAAGHKYIPGALRDLSISRSSFTWGIPVPE 236

Query: 223 ------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAI 273
                 + ++++YVW+DAL NY+T  GY  +     AKF   WPADLH++GK+I RFH +
Sbjct: 237 IVAGLTEQKHVIYVWLDALANYMTAVGYGSDDPADIAKFEKYWPADLHIVGKEITRFHCV 296

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG------------ 321
           YWPAFLL+A LPLPKK+ +HG++L +  K+SKS GN++    ++E  G            
Sbjct: 297 YWPAFLLAAGLPLPKKIVAHGWLLFEESKMSKSRGNIVRSETILEGFGSIKPDLPKAEQD 356

Query: 322 ---VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRYFL+REI  G+DG +  D +  R NADLANG GNLVSR++SM+ K++ G++P
Sbjct: 357 LFAADVLRYFLLREIPFGQDGSFSFDAMVTRYNADLANGYGNLVSRTLSMVEKNFGGVLP 416

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P     SDE        +   I  +   Q   RA   +  +++  DR+F    PW+L K
Sbjct: 417 AP-----SDEIPNGEFETLAALIDADFDTQTFTRATTSIAQMITNADRFFSEAAPWKLAK 471

Query: 439 TNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---- 492
               R     VLY + E IR +  LL   +P    +++  L + D  +  ++ +      
Sbjct: 472 EEASREKFGDVLYRSAESIRTITALLYPILPYATAQVWRQLGLGDIEQAAKNGELNNLHW 531

Query: 493 --LKPGFMLHKTFDPIFPR 509
             LKPG  L     PIFPR
Sbjct: 532 GGLKPGTKLGP-LAPIFPR 549


>gi|291556883|emb|CBL34000.1| methionyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 642

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 298/485 (61%), Gaps = 8/485 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YP+  PHIGH Y  +  D +ARF R+ G DV+F TGTDEHGQKI   A   GV
Sbjct: 6   YLTTPIYYPSGNPHIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAEKGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K +VD+   NF+ + + + ISYD FIRTT+  H +T + ++KK+ +KG IYKG Y G 
Sbjct: 66  TPKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFKKLYEKGYIYKGTYKGK 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E+++ + ++    DG+  +     V+   EE YF RLS + DK+  +  +  +++
Sbjct: 126 YCTPCESFWTESQL---VDGKCPDCGRE-VKEANEEAYFLRLSDFADKIEKFL-TETDYL 180

Query: 188 LPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            P  R NE+++ F+K GL+DL +SR +F WGI +  D ++++YVW+DAL+NY++  GY +
Sbjct: 181 QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDALSNYISALGYGN 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  K+WPAD+H+  K+I+RFH+I WP  L+  +LPLPK ++ HG+I   G+K+SKS
Sbjct: 241 EKYNDFEKYWPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHLYGHGWINFNGDKMSKS 300

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP  + E  GVDA+RY ++R++  G D  +  + +  R+NADLAN +GNLVSR+V
Sbjct: 301 KGNVVDPFVLCERYGVDAVRYQILRDMPYGSDCNFTNELMLTRINADLANDLGNLVSRTV 360

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M  K + G +PT     E D+ ++ +   +   +   ++     +AL ++  ++S  ++
Sbjct: 361 AMADKYFGGTLPTDRVSDELDDQLIGMAQSLCDTVTPLIEQAQHSKALEEIFKVISRANK 420

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K  +N  R +TVLY  +E IR  + LL  F+P    ++++ +    E+ 
Sbjct: 421 YIDETAPWVLAKDESNNARLATVLYNLLETIRICSALLSPFMPATMPEVWEQIGAGAEDT 480

Query: 485 CFQSL 489
            F  L
Sbjct: 481 AFDKL 485


>gi|325182837|emb|CCA17292.1| methionyltRNA synthetase of possible bacterial origi (ISS) putative
           [Albugo laibachii Nc14]
          Length = 741

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/478 (41%), Positives = 302/478 (63%), Gaps = 20/478 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++TAI Y N QPH+GHAYE + ADV+AR+HR+ G +V F TGTDEHGQKIA+ A+ 
Sbjct: 49  EKFYLTTAIHYTNGQPHMGHAYENVTADVIARYHRIFGRNVYFLTGTDEHGQKIAQTAEA 108

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K   D+ +  FR +   L++S   FIRTT ++H    + L+++  +KGDIY G Y
Sbjct: 109 LGIAPKELCDKYAAIFRQLTLDLNMSNSSFIRTTSEKHKVFAQWLFQRALNKGDIYLGTY 168

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY++R+E +  + E  +    +Y +     P++ M EE YFFR+S YQ +L+ ++ +H
Sbjct: 169 EGWYNVREEVFVTEVEAQQ---SEYKDPVSGIPLKKMREESYFFRMSKYQQRLVDHFHAH 225

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RR E++  ++  L+DLS SR TF  GI +P+D  +++YVW DAL NYL+  G
Sbjct: 226 PEFLQPETRRQEIMKRLEEPLQDLSSSRNTFSHGIPLPNDSNHVLYVWFDALANYLSAIG 285

Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           +   PD  +AK +WPA++H+IGKDI  FH + WP  L+S  +PLPK+VF+HGF+  K G 
Sbjct: 286 F---PDQVEAKTYWPANVHIIGKDITWFHCVIWPCILMSTEIPLPKRVFAHGFVNAKDGM 342

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP +++ + G+++ RYFLVR    G+D  + ++ L    N++LA+ +GNL
Sbjct: 343 KMSKSIGNVVDPYDIMNKFGLESFRYFLVRSARYGQDWPFSENDLINIHNSELADTLGNL 402

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+V++  K  DG++P     T S +      + +L +  +  ++  +  A+  VI  +
Sbjct: 403 VHRTVNICKKYSDGVVPN----TLSPDRPFDFIT-LLSQSEDAYRDFALQSAVILVIEAL 457

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANKIFDIL 477
            +V+RY   + PW +     D AS ++ V   +E I  LA  L  F+PK +  IF+ L
Sbjct: 458 RDVNRYLTDKAPWHMT----DSASRLIVVRTCLEAIYLLAHFLAPFIPKTSETIFEKL 511


>gi|209558897|ref|YP_002285369.1| methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540098|gb|ACI60674.1| Methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 666

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/518 (37%), Positives = 311/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++   +FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERSDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|22298292|ref|NP_681539.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|25009348|sp|P59081|SYM_THEEB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|22294471|dbj|BAC08301.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 529

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/474 (39%), Positives = 281/474 (59%), Gaps = 7/474 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA PHIG AY  I ADVLARF+RL G  V F TGTDEHGQKI + AQ  G++
Sbjct: 7   LTTPLYYVNALPHIGSAYTTIAADVLARFYRLQGYQVRFITGTDEHGQKIERTAQQRGLS 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  F+ +   L+I YD F RTT  RHH      ++++ D GDIY G   GWY
Sbjct: 67  PQAHCDEIAAGFQALWQQLNIHYDRFSRTTSPRHHAIVNEFFQRVWDNGDIYLGQQQGWY 126

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +  + E+ +G     +   +  V+W +E  YFFRLS YQ  LL +Y  HP+F+ 
Sbjct: 127 CVECEEFKEERELLEGRRCPIH--VNRTVEWRDERNYFFRLSKYQQALLDHYAEHPDFVQ 184

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247
           P  RRNEV+SF++ GL+D S+SR    WG  +P DP+  +YVW DAL  Y+T      D 
Sbjct: 185 PPSRRNEVLSFIERGLQDFSISRVNLAWGFPVPTDPEQTLYVWFDALLGYVTALLEPEDE 244

Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           P  + A   +WP +LH+IGKDILRFH I WPA L+SA LPLP+++F HGF+   G+K+ K
Sbjct: 245 PTLANALKTWWPINLHIIGKDILRFHGISWPAMLMSAGLPLPEQIFVHGFLTKDGQKMGK 304

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN +DP  ++ + G DA+RY+ ++E+  G+DG + +      +NADLAN +GNL++R+
Sbjct: 305 SLGNTLDPFALVAQYGADAVRYYFMKEVEFGRDGDFSETRFVTILNADLANDLGNLLNRT 364

Query: 366 VSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           + M  K  DG +P   GA    +  +  +   + Q   +  +    H    Q ++L    
Sbjct: 365 LKMAWKYTDGKVPNVQGAAIPREHPLRQLAEHLSQTYGQGYRQLAFHEVCQQALTLARAG 424

Query: 425 DRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +++ D + PW+  +     A + +LY  +E +R +A +L   +P+L+  I+  L
Sbjct: 425 NKFLDEEAPWKRYRAGETAAVAEILYCVLESVRLVAYVLAPIIPQLSEAIYGQL 478


>gi|171780192|ref|ZP_02921096.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281540|gb|EDT46975.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 667

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/522 (37%), Positives = 304/522 (58%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + +  +LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +   FW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDNFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K + G +P      T  D  +  V    L E  + M     
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVPAYVKNVTAFDADLADVVEEKLAEYHKQMNAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V S++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F+  
Sbjct: 421 PRALDAVWSIISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +             G  +     PIFPR 
Sbjct: 481 TSNTIMEQLGLGSDFDLENLTLAGFPEGVKVVAKGTPIFPRL 522


>gi|67921186|ref|ZP_00514705.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67857303|gb|EAM52543.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 535

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/489 (39%), Positives = 287/489 (58%), Gaps = 14/489 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  ++T + Y N  PHIG AY  IIADV+AR  RL G +VL  TGTDEHGQKI + A+ 
Sbjct: 9   KKFALTTPLYYVNGVPHIGSAYTTIIADVIARHKRLIGDEVLLITGTDEHGQKIQRTAEE 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   D+   +F ++   L+I YD F RTT  +H    +  ++++ + GDIY    
Sbjct: 69  KGLAPQKHCDEIVSSFEELWQKLEIQYDRFSRTTASKHEVIVKEFFERVWENGDIYLAQQ 128

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E +    E+ +  DG      +   +W +EE YFF+LS YQ KL   YE +P
Sbjct: 129 QGWYCVACEEFKEKRELLE--DGCCPIHTNKKAEWRDEENYFFKLSKYQTKLEELYEKNP 186

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+++FV  GL+D S+SR   +WG  IP DP + +YVW DAL  Y+T    
Sbjct: 187 QFIQPESRRNEILNFVNQGLQDFSISRVNLEWGFPIPKDPSHTIYVWFDALLGYVTA--- 243

Query: 245 LDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L  P+         + +WP +LH+IGKDILRFHAIYWPA L+SA LPLP KVF HGF+  
Sbjct: 244 LLEPEAEPTLNNALSTWWPINLHLIGKDILRFHAIYWPAMLMSAELPLPDKVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ K+LGN +DP  ++++ G DA+RY+ ++EI CGKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKTLGNTLDPFALVDKYGADAVRYYFLKEIECGKDGDFNETRFVNILNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQV 417
           GNL++R++ M  K   G +P   A     E  L      L E + +  +    +    ++
Sbjct: 364 GNLLNRTLGMTKKYCKGSLPELTAAELPQEHPLKTIGLTLGEKVIKAYETLKFNEGCEEI 423

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++L+   +++ D Q PW L K+        +LY  +E +R  A LL   +P L++KI++ 
Sbjct: 424 LTLIRAGNKFIDEQAPWRLFKEGKQAEVEQILYGVLESVRLAAYLLAPIIPNLSSKIYEQ 483

Query: 477 L-FVADENR 484
           L F  D N+
Sbjct: 484 LGFSVDFNQ 492


>gi|306831942|ref|ZP_07465097.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425868|gb|EFM28985.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 667

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/525 (37%), Positives = 309/525 (58%), Gaps = 18/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   +V + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++L+ISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHTHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407
            +LAN +GNL++R+V+MI K + G +P   A+ E+    D  +  V    L E  + M  
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVP---AYVENVTAFDADLAGVVEEKLAEYHKQMNA 417

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465
               RAL  V S++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F
Sbjct: 418 VDYPRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPF 477

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +N I + L +  +             G  +     PIFPR 
Sbjct: 478 MMTTSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRL 522


>gi|288905923|ref|YP_003431145.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978889|ref|YP_004288605.1| methionyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732649|emb|CBI14221.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178817|emb|CBZ48861.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 667

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/525 (37%), Positives = 309/525 (58%), Gaps = 18/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   +V + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++L+ISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407
            +LAN +GNL++R+V+MI K + G +P   A+ E+    D  +  V    L E  + M  
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVP---AYVENVTAFDADLAGVVEEKLAEYHKQMNA 417

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465
               RAL  V S++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F
Sbjct: 418 VDYPRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPF 477

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +N I + L +  +             G  +     PIFPR 
Sbjct: 478 MMTTSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRL 522


>gi|119487032|ref|ZP_01620904.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
 gi|119455961|gb|EAW37095.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
          Length = 534

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/486 (40%), Positives = 286/486 (58%), Gaps = 16/486 (3%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ E L+ ++T + Y N  PH+G AY  + AD +ARF RL G  VL  TGTDEHGQKI +
Sbjct: 4   KKTENLFTLTTPLYYVNDVPHVGSAYTTMAADAVARFQRLQGKSVLLITGTDEHGQKIER 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++   + +   DQ   +F  +   LDI YD F RTT+ RH    +  + ++ D+ DIY
Sbjct: 64  TAESLNRSPQEHCDQIVSSFESLWHKLDIQYDRFSRTTDSRHAAIVKEFFGRVWDQEDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSY 179
                GWY +  E +  + E+    D +Y     N  V+W +E+ YFFRLS YQ +L + 
Sbjct: 124 LSQQQGWYCVACEEFKEEREL---IDEKYCPIHTNKQVEWRDEQNYFFRLSKYQKQLEAL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y+  P+FI P  RRNEV++FV  GL+D S+SR   DWG  +P DP   +YVW DAL  Y+
Sbjct: 181 YQEQPDFIQPESRRNEVLNFVSQGLQDFSISRLNVDWGFPVPVDPNQTIYVWFDALLGYV 240

Query: 240 TTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           T    L +PD       + +K WP  LH+IGKDILRFHA+YWPA L+SA++PLP ++F H
Sbjct: 241 TA---LLDPDREATLENALSKGWPISLHLIGKDILRFHAVYWPAMLMSADIPLPGRIFGH 297

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           GF+   G+K+ KSLGN +DP+E++ + G DA+RY+ ++EI  G+DG ++       VNAD
Sbjct: 298 GFLTKDGKKMGKSLGNTLDPVELVRQFGSDAVRYYFLKEIEFGQDGDFNLTRFINTVNAD 357

Query: 354 LANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++ M  K ++G IP   GA    D  + S    + Q + +  +      
Sbjct: 358 LANDLGNLLNRTLRMAHKYFEGRIPHVSGAVIPEDNPLKSYGVTLGQTVAQGYERLAFSE 417

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
               +++LV   ++Y D Q PW L K+   D   +VLY  +E +R  A LL    P L+N
Sbjct: 418 VCDAILNLVQAGNKYIDEQAPWALYKQEKLDLVESVLYSVLESVRLAAYLLSPITPNLSN 477

Query: 472 KIFDIL 477
            I+  L
Sbjct: 478 GIYHQL 483


>gi|242279644|ref|YP_002991773.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242122538|gb|ACS80234.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 646

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/516 (40%), Positives = 310/516 (60%), Gaps = 20/516 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +I+T I Y NA+PH+GHAY  I+AD + RFH+L G +  F TGTDEHG KI +AA+ 
Sbjct: 2   DSFFITTPIYYVNAKPHLGHAYTTILADSMNRFHKLLGDETFFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD+ S  F  +   L I  DDFIRTT++RH    + + +K+ DKGDIY G Y
Sbjct: 62  GGQTPREYVDEISSLFSGLWPGLQIENDDFIRTTQERHIKCVQEVLQKVYDKGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183
            G Y    E +Y + E+  G        QH  V +++ E+ YFF++S YQD L+++   +
Sbjct: 122 GGHYCFGCERFYTEKELVDGK-----CPQHETVPEYIAEKNYFFKMSKYQDWLIAHINDN 176

Query: 184 PEFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           PEFI P   RNEV+S +KSG L+DL +SR     +WGI++P D +++ YVW DAL NY+T
Sbjct: 177 PEFIRPERYRNEVLSLLKSGELEDLCISRPKSRLEWGIELPFDDKFVTYVWFDALINYIT 236

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              Y   PDG K  KFWP   H++ KDIL+ HAI+WP  L +A +   + +  HG+ L K
Sbjct: 237 ALEY---PDGEKYEKFWPKANHLVAKDILKPHAIFWPTMLKAAEIEPYQHLNVHGYWLIK 293

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNV+ P+E+ E+ GV+A RYFL+RE+  G D  + ++ L  R+NADLAN +G
Sbjct: 294 DTKMSKSLGNVVSPLEMAEKYGVNAFRYFLLREMVFGNDSSFSEEALVGRLNADLANDLG 353

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL SR++SM  K ++G +P  G   + D  I S+  + + E + N  +    R L  +  
Sbjct: 354 NLFSRTLSMTHKYFEGKVPAQGDEADEDCEIKSLGRKAMAEFQNNFIDAKFSRGLEGLWE 413

Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI---FD 475
           LV  +++Y D  +PW L K+ N  R  TV+YV +E +R++A+ L   +P+ +  +     
Sbjct: 414 LVRGLNKYIDTTQPWTLYKEENMSRLGTVMYVLLENMRKIAVHLWPVMPEASEMMLGQLG 473

Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPR 509
           I F  ++      +D    L PG  + K  + +FPR
Sbjct: 474 IQFAPEKVNLQGEIDVWGLLDPGTEVAKKSN-LFPR 508


>gi|118474589|ref|YP_891971.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118413815|gb|ABK82235.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 632

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/512 (40%), Positives = 315/512 (61%), Gaps = 19/512 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  IIAD +AR++RL G D  F TGTDEHGQKI +AA+  
Sbjct: 2   KKFITTPIYYVNDVPHIGHAYTTIIADTMARYYRLVGYDTFFLTGTDEHGQKIEEAAKAH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T K + D+ S  FR + D  +ISYD FIRTT+  H  T + ++ K+ +KGDIYKG Y 
Sbjct: 62  CKTPKEYADEVSAKFRSLWDEFEISYDHFIRTTDDYHKFTAQNVFLKMYEKGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++  +++    D ++        + ++EE YFF+LS YQDKLL +YE    
Sbjct: 122 GNYCVSCETFFPQNQL---IDDEFCPDCGKKTRIVKEESYFFKLSDYQDKLLKWYEKG-N 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP  ++NEVISFVK GLKDLS++R +F+WG+K+P   ++P+++MYVW+DAL NYL+  
Sbjct: 178 CILPKGKKNEVISFVKGGLKDLSITRTSFEWGVKLPSSLNEPRHVMYVWLDALINYLSAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D  +  +W   +H++GKDILRFHA+YWPAFL+S  LPLP  V +HG+    G+K
Sbjct: 238 GY--TTDNKRMDYWNDTMHLVGKDILRFHAVYWPAFLMSLELPLPTSVAAHGWWTRDGKK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  V    G++A RYFL+RE+  G+DG + +  L  R+N++L+N +GNL+
Sbjct: 296 MSKSIGNVVDPRAVANAYGLEAFRYFLLREVPFGQDGDFSQKALIDRINSELSNDLGNLL 355

Query: 363 SRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           SR V M  K  +  I +      +    ES  +   + ++ I E   N+ +   L +V+S
Sbjct: 356 SRIVGMSSKYSNYEINSQNVTKLYLNELESAKTHLDQAIEAINEVATNRYLEE-LWKVLS 414

Query: 420 LV-SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L  + V +Y    +PW L K+   D A+ ++ +   ++ ++A+LL   +PK ++KI   L
Sbjct: 415 LANASVAKY----EPWNLIKEGKTDEANALVALVANLLAKVAVLLSPAMPKSSDKIAKTL 470

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                 + +  +  + +   +   + +P+F +
Sbjct: 471 GFEINTKTYNDIILKNELLNLKSSSTEPLFTK 502


>gi|94989852|ref|YP_597952.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94543360|gb|ABF33408.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 666

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY   
Sbjct: 63  EAGIKPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLDE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|303326810|ref|ZP_07357252.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862798|gb|EFL85730.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 665

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 294/478 (61%), Gaps = 13/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +I+T I Y NA PH+GHAY  I+AD LARFH+L G D LF TGTDEHG KI +AA+ 
Sbjct: 2   KSFFITTPIYYVNANPHLGHAYTTIVADSLARFHKLLGEDTLFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T K FVD  S  FR +   L I+ D F+RTT++ H  T +   +K+ D GDIY G +
Sbjct: 62  QGQTPKEFVDDISGRFRALWPQLGIANDRFVRTTDEAHKRTVQDFLQKVYDAGDIYFGEF 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G   Q+        +++ E+ YFFR+S Y   L  Y   HP
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQHLTKP----EFISEKNYFFRMSKYLPWLREYISQHP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   R+EV++ ++SG L+DL +SR KT   WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRSEVLAMLESGALEDLCISRPKTRLTWGIELPFDKNYVCYVWFDALINYISA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PDG++  ++WP + H++ KDIL+ HA++WP  L +A LPL K +  HG+ L + 
Sbjct: 238 LGW---PDGAEYVRYWPGE-HLVAKDILKPHAVFWPTMLKAAGLPLYKHLNVHGYWLSRD 293

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP+E     G+DA RYFL+RE+  G D  + ++ L  R+NADLAN +GN
Sbjct: 294 TKMSKSLGNVVDPLETGRRFGLDAFRYFLLREMHFGSDASFSEESLIGRINADLANDLGN 353

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR +SM  K +   +P P      DE+++ +C+  ++   +   N    +AL  +  L
Sbjct: 354 LFSRVLSMTAKYFGSCVPQPKQREPEDEAMVELCATAMRNFSQLFGNVQFAQALESLWEL 413

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  +++Y D+Q PW L K+ N +R +TV+Y+ +  +R++A+ L   +P  + ++ + L
Sbjct: 414 VRALNKYVDSQAPWALHKQGNMERLATVMYILLAAMRKVALCLWPVMPAASRRMLEQL 471


>gi|78356637|ref|YP_388086.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219042|gb|ABB38391.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 642

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/495 (41%), Positives = 293/495 (59%), Gaps = 17/495 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA+PH+GHAY  I+AD L RFH L G    F TGTDEHG KI +AA+ 
Sbjct: 2   QPFYITTPIYYVNAKPHLGHAYTTIVADALRRFHTLLGKKTFFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD  S  FRD+   + I+YD F+RTT++ H    + + +K+ D GDIY G Y
Sbjct: 62  NGCTPQEYVDSISATFRDLWPSMGITYDRFVRTTDESHKKCVQAVLQKVYDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G   Q+   Q  P +++ E+ YFFR+S YQD L  Y   +P
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYIAEKNYFFRMSKYQDWLRQYILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S + SG L+DL +SR      WG+++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSLLDSGALEDLCISRPKSRLSWGVELPFDTDYVCYVWFDALLNYVSA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              L+ PDG +   FWP   H++ KDIL+ HA++WP  L +A       +  HG+ L + 
Sbjct: 238 ---LNWPDGEEFTTFWPGVQHLVAKDILKPHAVFWPTMLKAAGFEPYNNLNVHGYWLVRD 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNVI+P+E+    G+ A RYFL+RE+  G D  + ++ L  R+NADLAN +GN
Sbjct: 295 TKMSKSLGNVIEPLEMAGRYGLSAFRYFLLREMHFGSDASFSEEALVARLNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR +SM  K +DG++P+P A+T  DE I+++     +      +      AL  +  L
Sbjct: 355 LFSRVLSMTGKYFDGVVPSPAAYTADDEDIINLAKDACRNYVRLFERVRFSNALESLWEL 414

Query: 421 VSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V  +++Y D+  PW L KT +  R  TVLYV +E +R++A+ L   +P+ +  +   L V
Sbjct: 415 VRALNKYVDSSAPWTLYKTGDTARLGTVLYVLLECMRKVAVNLWPVMPEASEAMLGQLHV 474

Query: 480 ADENRCFQSLDQRLK 494
                CF S   RL+
Sbjct: 475 -----CFDSAGTRLQ 484


>gi|257784887|ref|YP_003180104.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473394|gb|ACV51513.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 536

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/527 (37%), Positives = 313/527 (59%), Gaps = 26/527 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I+T I Y NA+PH+G AY  ++ D+ ARF R  G DV F TG DEHG+K+A AA + G+
Sbjct: 9   FITTPIYYVNAKPHLGTAYCTLLCDIQARFRRAAGYDVFFLTGMDEHGEKVALAAADHGL 68

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + + + D     F+ + + L+ISYDDFIRTT++RH    + LW+++ + G IYKG Y GW
Sbjct: 69  SPQAWCDSQVPFFKGLYEELNISYDDFIRTTDERHVKAVQYLWERMREAGFIYKGSYDGW 128

Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           Y + +E ++ + +V K     G  G +     H  ++ + EE +FF+LSA+QDKLL  Y 
Sbjct: 129 YCIHEETFFTETQVEKADEEAGCKGAHLCPDCHRELERVSEESWFFKLSAFQDKLLELYA 188

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP+FI P  R NEV SFV+SGL+D+S+SR +FDWGI +P D  ++ YVW DAL NY T 
Sbjct: 189 EHPDFIEPDFRANEVRSFVESGLQDISVSRTSFDWGIPVPFDESHVTYVWFDALLNYYTA 248

Query: 242 TGYLDN-PDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY D+ P+ +  + +FWPA +HV+GKDI+RFH + WPA L++    +P+ +F+HGF+  
Sbjct: 249 VGYGDDSPEAAAMRKRFWPAQMHVVGKDIIRFHCVIWPAMLMALGEAVPEHIFAHGFLNV 308

Query: 299 KG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           +       EK+SKS GN I P +V++ +GV+  RY+ + ++  G+D     + +++  NA
Sbjct: 309 RNSETGVVEKMSKSRGNAIAPKDVLDLLGVEGYRYYFMTDVTPGEDSGISFERMEQVYNA 368

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN  GNLVSR+++M  K ++G+ PT  G+   +D  +  +   +       M+     
Sbjct: 369 DLANSWGNLVSRALNMSDKYFEGVTPTFDGSSVAADHPLRKLAEGIYDRYATCMEKMDYV 428

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPK 468
            A   ++ LV   + Y +   PW + K +P+RA   + ++Y  +E IR  A L   F+P 
Sbjct: 429 GAKNIIMELVHAANHYIEDAAPWTVAK-DPERAAELAEIIYTLLESIRICAHLFMPFMPT 487

Query: 469 LANKI-----FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + ++      D + +   +   +    RL+ G  + K  D +FPR 
Sbjct: 488 TSTEVLRRMSLDEVEINSTDARSECTWGRLQGGLAVSKG-DALFPRL 533


>gi|296876924|ref|ZP_06900969.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432055|gb|EFH17857.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 663

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/524 (38%), Positives = 314/524 (59%), Gaps = 25/524 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY  +   +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +HG+ 
Sbjct: 243 YVTALGYGQDDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIAHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARNNYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412
            +GNL++R+V+MI K + G +P   A+ E+    D  +  V    + E  + M      R
Sbjct: 363 DLGNLLNRTVAMINKYFGGQVP---AYVENVTAFDADLAKVVEESIAEYHKQMNAVDYPR 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLA 470
           AL  V +++S  ++Y D   PW L K + D+   V  +      +R +A L+Q F+   +
Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKEQLVAVMAHLAASLRVVAHLIQPFMMNTS 479

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
           N I + L +   +  F  L+     GF  + T      PIFPR 
Sbjct: 480 NAIMEQLGL---DLDF-DLENLTLAGFPENVTVVAKGTPIFPRL 519


>gi|39938719|ref|NP_950485.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39721828|dbj|BAD04318.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 520

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/497 (41%), Positives = 306/497 (61%), Gaps = 20/497 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K ++STAIAY +  PHIG+ YE I+AD +ARF RL+G DVLF TGTDEHGQKIA  A
Sbjct: 7   QKPKFFLSTAIAYASGIPHIGNVYESILADAIARFKRLEGFDVLFQTGTDEHGQKIAAKA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G   + +VDQ S   + + D++ +SYD F +TT   H  T + ++ K+  +GDIY G
Sbjct: 67  LQQGKNPQEYVDQISLEIKRIYDLMQVSYDKFAKTTNPHHKQTVQAIFYKLWQQGDIYLG 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G YS+ +E+Y    ++    DG+ +N +  P+  + EE YFF+LS YQ +LL Y E+
Sbjct: 127 KYQGLYSVAEESYVAAKDL---IDGKTFNGE-TPI-LISEETYFFKLSKYQAQLLQYLEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P  I P  +R E+++ +K  L DLS+SR +F WGI +P DP++++YVWIDAL+NYLT  
Sbjct: 182 NPSLIKPDAQRKELLNLLKEPLADLSVSRTSFKWGIPVPFDPKHVIYVWIDALSNYLTGL 241

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            Y  NP    ++F   WP D+HVIGKDILRFH IYWP  L++  + LPK+  +H +IL  
Sbjct: 242 DY--NPTSKNSQFNRYWPCDMHVIGKDILRFHLIYWPILLMALEISLPKQFLTHPWILFD 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++++   VD++RYF++ EI   +DG    + L +R N+DLAN +G
Sbjct: 300 KNKMSKSKGNVLYVDDLLKYFPVDSIRYFVLSEIPYAQDGNITYELLVERHNSDLANVLG 359

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE---IRENMQNQLIHRALAQ 416
           NLV R   M+ K Y     +    T + +    +  + L     +R  MQ+  +  +L +
Sbjct: 360 NLVHRVFGMV-KSYRQNNLSKTLITTNLDPKFDLSKQALATLPLVRLKMQDCKVGDSLKE 418

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKI 473
           +++L    ++Y D  +PW L K NP++   +   LY  VE +R L +LLQ F+P+ A+KI
Sbjct: 419 IMNLARFANKYIDLVEPWNLFK-NPEKQQLLDHTLYSLVETLRFLGVLLQPFLPQTAHKI 477

Query: 474 FDILFVADENRCFQSLD 490
              L  +D    F+SLD
Sbjct: 478 LTQLKASD--ITFESLD 492


>gi|312867085|ref|ZP_07727295.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097214|gb|EFQ55448.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 663

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/524 (38%), Positives = 314/524 (59%), Gaps = 25/524 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++ +HG+ 
Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPERLIAHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412
            +GNL++R+V+MI K + G +P   A+ E+    D  +  V    + E  + M      R
Sbjct: 363 DLGNLLNRTVAMINKYFVGQVP---AYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPR 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +
Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLIQPFMMNTS 479

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
           N I + L +  +      L+     GF  + T      PIFPR 
Sbjct: 480 NAIMEQLGLGLDF----DLENLTLAGFPENVTVVAKGTPIFPRL 519


>gi|306834069|ref|ZP_07467189.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423642|gb|EFM26788.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 667

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/525 (37%), Positives = 309/525 (58%), Gaps = 18/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   +V + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWEMLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ ++P+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAYPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQN 407
            +LAN +GNL++R+V+MI K + G +P   A+ E+    D  +  V    L E  + M  
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVP---AYVENVTAFDADLAGVVEEKLAEYHKQMNA 417

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465
               RAL  V +++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F
Sbjct: 418 VDYPRALDAVWNIISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPF 477

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +N I + L +  +             G  +     PIFPR 
Sbjct: 478 MMTTSNAIMEQLGLGSDFDLENLTLAGFPEGVKVVAEGTPIFPRL 522


>gi|94987625|ref|YP_595558.1| methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731874|emb|CAJ55237.1| Methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 651

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/520 (39%), Positives = 314/520 (60%), Gaps = 28/520 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YIST I Y NA+PH+GHAY  I+ADVL RF+ + G    F TGTDEHG+KI +AA+ AG 
Sbjct: 6   YISTPIYYVNARPHLGHAYSTIVADVLQRFYSILGEKTFFLTGTDEHGEKIIQAAEAAGY 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           +T+ FVD  SR F+++   L+I+YD FIRTT+ +H +  +   + I D GDIY G + G+
Sbjct: 66  STQEFVDSISRQFQNLWPQLNITYDAFIRTTDLQHKEAVQKFLQHIYDAGDIYFGEFGGY 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           Y L  E +Y + E+  G     +  QH    +++EE+ YFF++S Y   L+ Y + HP  
Sbjct: 126 YCLGCERFYTEKELEDG-----FCPQHKTKPEFIEEQNYFFKMSKYLSWLIEYLQQHPNL 180

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           I P   +NEV+S ++SG L+DL +SR KT   WGI++P D  Y+ YVW DAL +Y++   
Sbjct: 181 IRPERYKNEVLSLLESGALEDLCISRPKTRLPWGIELPFDTNYVCYVWFDALISYISA-- 238

Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            L+ P G   K FWP + H+I KDIL+ HA++WP  L SA LP+ K +  HG+ L++  K
Sbjct: 239 -LNWPTGEYYKTFWPGE-HLIAKDILKPHAVFWPTMLKSAGLPMYKHLNVHGYWLNRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSL N IDPI +I++ G+DA RYFL+RE+  G D  + ++ LK R+N+DLAN +GNL 
Sbjct: 297 MSKSLNNAIDPITLIQQYGLDAFRYFLIREMNFGSDANFSEESLKHRINSDLANDLGNLF 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R +SM  K +  ++P    +TE D  +  +         + M+N  + +A+  +  L+ 
Sbjct: 357 NRVLSMSTKYFKSLLPEAKEYTEPDMQLRQLTENAQYNYIQLMKNMRLSQAVEALWELIR 416

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++Y D Q PW+L K+   DR  TV+ +T+E +R++AI L   +P++   +   L ++ 
Sbjct: 417 ALNKYIDTQAPWKLFKEGQTDRLKTVIRLTLECMRKVAISLWPIMPEITITMLKQLGIST 476

Query: 482 E---------NRCFQS---LDQRLKPGFMLHKTFDPIFPR 509
                       C  +     ++L  G ML  T + +FPR
Sbjct: 477 SKSKKYGNIPTTCINNDIHAWEQLTTGTMLAPTSN-LFPR 515


>gi|113475475|ref|YP_721536.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166523|gb|ABG51063.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 530

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/525 (39%), Positives = 298/525 (56%), Gaps = 23/525 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I+T + Y N  PHIG AY  I AD LARF RL G  VL  TGTDEHGQKI + A
Sbjct: 7   DKNTFAITTPLYYVNDLPHIGSAYTTIAADTLARFQRLQGRSVLMITGTDEHGQKIQRTA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +N G   K   D   R F  + + L+I YD FIRTT   H    +  ++++ +K DIY  
Sbjct: 67  ENKGRNPKEHCDSVVRGFESLWEQLNIQYDRFIRTTAPNHEKIVKEFFQRVWEKEDIYLS 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              GWY +  E +  + E+ +      +  Q   V+W +E+ YFFRLS YQ++L ++Y+ 
Sbjct: 127 QQKGWYCVSCEEFKEERELTEDKHCVIHTNQK--VEWRDEQNYFFRLSRYQERLQAFYQD 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             EFI P  RRNEV+SFV  GL+D S+SR   DW  K+P D  + +YVW DAL  Y+T  
Sbjct: 185 RQEFIQPQSRRNEVLSFVNQGLQDFSISRVNVDWAFKLPVDSSHTIYVWFDALLGYVTA- 243

Query: 243 GYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
             L +PD         +K+WP +LH+IGKDILRFHA+YWPA L+SA+LPLP++VF HGF+
Sbjct: 244 --LLDPDSEPTLENALSKWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPERVFGHGFL 301

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+ KSL N +DP E+I++ G DA+RY+ ++EI  G DG ++++     +NADLAN
Sbjct: 302 TKDGKKMGKSLNNTLDPFELIQKYGSDAVRYYFLKEIEFGVDGDFNENRFINVLNADLAN 361

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R++ M  K ++G IP       E    +  +   + +++ +   +    +   
Sbjct: 362 DLGNLLNRTLKMAHKYFNGQIPKINVQEVEVTHPLKKIGMGLGEKVTQAYTSLDFSQVCE 421

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V+ LV   ++Y D   PW L K     A T VLY  +E +R +A LL   +P ++N I+
Sbjct: 422 AVLILVRTGNKYIDETAPWSLYKQGQLEALTEVLYSVLESVRLVAYLLSPIIPNISNAIY 481

Query: 475 DILFVA---DENRCFQSLDQRLK-------PGFMLHKTFDPIFPR 509
             L  +   ++     S +  +K       PG  L     PIF R
Sbjct: 482 QQLGFSNNFNDKSAINSSETFVKQVSWGALPGNQLLGQPQPIFQR 526


>gi|319947459|ref|ZP_08021691.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746399|gb|EFV98660.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 663

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/524 (38%), Positives = 313/524 (59%), Gaps = 25/524 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVW DAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSNPRHVVYVWFDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP+++  HG+ 
Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIGHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412
            +GNL++R+V+MI K + G +P   A+ E+    D  +  V    + E  + M      R
Sbjct: 363 DLGNLLNRTVAMINKYFGGQVP---AYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPR 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +
Sbjct: 420 ALEAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVMAHLIQPFMMNTS 479

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF----DPIFPRF 510
           N I + L +  +      L+     GF  + T      PIFPR 
Sbjct: 480 NAIMEQLGLGLDF----DLENLNLAGFPENVTVVAKGTPIFPRL 519


>gi|56807711|ref|ZP_00365584.1| COG0143: Methionyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 666

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFTITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++   +FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERSDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A  ++V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|153952241|ref|YP_001398097.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939687|gb|ABS44428.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 628

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/470 (42%), Positives = 294/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETKFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + ++ S  F+ + D L+ISYD + RTT   H +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYANKISFEFKKLWDELEISYDIYARTTNTMHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++         +   N    ++EE YFFRLS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINNCSCP--DCGKNTT-ILKEESYFFRLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +DP++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEMNDPKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G KAKFWPA +H+ GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGEKAKFWPAHVHLAGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K + G I   G     D   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYFQGNISKEGVLKFYDAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A  ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NIAISKYEPWNLIKENKHEQAHALVALCANILAKTSLLLSPTLPKSCQKV 465


>gi|46199235|ref|YP_004902.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|46196860|gb|AAS81275.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 618

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/486 (40%), Positives = 295/486 (60%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++    
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD P+G   + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G IP P A  E     L+  + + + +R  ++    H AL + ++ V 
Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAKRLRPLVRELKFHVALEEAMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|166367026|ref|YP_001659299.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089399|dbj|BAG04107.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 537

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/503 (40%), Positives = 291/503 (57%), Gaps = 13/503 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ER+   ++T + Y N  PHIG AY  I+ADV+AR+ RL G  VL  TGTDEHGQKI +
Sbjct: 4   LNERKTFALTTPLYYVNDIPHIGSAYTTIVADVMARWQRLQGNSVLLITGTDEHGQKIER 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+  +   D+ + +F ++   L I YD F RTT  RH       ++++ +KGDIY
Sbjct: 64  TAAAKGLNPQEHCDRIATSFANLWAKLHIQYDRFSRTTAPRHQAIVNEFFERVWEKGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY +  E +    E+        +   +   +W +EE YFFRLS YQ +L  +Y
Sbjct: 124 LDRQQGWYCVACEEFKEKRELLDNGCCPIHT--NLAAEWRDEENYFFRLSKYQTQLEQFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +  P+FI P  RRNEV++FV  GL+D S+SR    WG  IP D Q+ +YVW DAL  Y+T
Sbjct: 182 QEQPDFIQPESRRNEVLNFVNQGLQDFSISRVNVAWGFPIPHDGQHTIYVWFDALLGYVT 241

Query: 241 TTGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
               LD  D      + AK+WP DLH+IGKDILRFHAIYWPA L+SA LPLPK+VF HGF
Sbjct: 242 --ALLDPEDEPTLENALAKWWPIDLHLIGKDILRFHAIYWPAMLMSAGLPLPKRVFGHGF 299

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G K+ KSLGN +DP ++++  G DA+RY+ V+EI  G+DG + +      +NADLA
Sbjct: 300 LTKDGRKMGKSLGNTLDPFDLVDRYGADAVRYYFVKEIELGQDGDFQETRFVNILNADLA 359

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N +GNL++R++ M+ K    + P        +++ L      L  I E   + L  ++A 
Sbjct: 360 NDLGNLLNRTLGMVKKYCQNIPPQLTGVDIPNDNRLKNMGINLGGIVEQKYDALQFNQAC 419

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++++L+   +++ D   PW L K     A   VLY  +E +R  A LL   +P L++KI
Sbjct: 420 EEILALIRASNKFIDESAPWSLFKQKQQAAVEQVLYAVLESVRLSAYLLSPIIPTLSSKI 479

Query: 474 FDIL-FVADENRCFQSLDQRLKP 495
           +  L FV D N  F+S D    P
Sbjct: 480 YQQLGFVIDFN-TFRSEDGEDPP 501


>gi|68543|pir||SYTWMT methionine-tRNA ligase (EC 6.1.1.10) - Thermus aquaticus
 gi|155136|gb|AAA27510.1| transfer RNA-Met synthetase [Thermus thermophilus]
          Length = 616

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 293/486 (60%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++    
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD P+G   + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G IP P A  E  E    +  R+   +RE       H AL + ++ V 
Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|255076485|ref|XP_002501917.1| methionyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226517181|gb|ACO63175.1| methionyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 931

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/477 (40%), Positives = 279/477 (58%), Gaps = 15/477 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  I+TAI Y N  PH+GHAYE I AD +AR+HR  G DVLF TG+DEHGQKIA+AA+ 
Sbjct: 228 EKFCITTAINYANGAPHMGHAYEAISADCIARYHRRYGRDVLFQTGSDEHGQKIAEAAET 287

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG       D+    F+ +     +S D + RTT + H   CR L++     GDIY   Y
Sbjct: 288 AGCAPIELCDKYVNAFQTLNAKTKVSNDVYNRTTSESHKAACRKLFEMSKANGDIYLDTY 347

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY++R+E +  + +    A   Y +     P++ M+EE YFFR S YQ +L+ + E +
Sbjct: 348 EGWYNVREETFVTETDA---AAANYLDPVSGKPLKKMKEESYFFRQSRYQSRLIEHIEKN 404

Query: 184 PEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  RRNE+++ ++   L+DLS+SR TFDWGI +PD P ++MYVW DALTNYLT T
Sbjct: 405 PAFIQPTRRRNEILARLREDELRDLSVSRTTFDWGIPVPDAPGHVMYVWFDALTNYLTGT 464

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           G+   P+G     WPA +H+IGKDI+ FH + WP  L SA LPLPK VF HGF+    G+
Sbjct: 465 GWPQKPNGD--GMWPASVHIIGKDIIWFHCVIWPCMLWSAGLPLPKTVFGHGFVTAADGQ 522

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP++ +     D  RY+L+R    G D  + +  L    N+DLA+ +GNL
Sbjct: 523 KMSKSIGNVVDPMDQLTRYSSDTFRYYLMRNAVYGSDVPFSESNLVYVHNSDLADVMGNL 582

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+ ++  K+  G++P        D ++L V S       + M N  + R     I+ +
Sbjct: 583 VHRATNLCNKNCGGVVPDCVPEKVFDVNLLRVQS------EQAMSNLEVQRCCELAINAM 636

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + ++Y     PW +K     +R + ++  T+E +   A  L  F+P   + IF+ L
Sbjct: 637 KDTNKYLTDSAPWAVKGDGAAERKAVIIRSTLEAVYAAAHFLAPFIPDACDAIFEKL 693


>gi|328883600|emb|CCA56839.1| Methionyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 535

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/481 (40%), Positives = 296/481 (61%), Gaps = 14/481 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   
Sbjct: 14  FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEAND 73

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + L+I+ DDFIRTT+KRH D  +   + + DK +IYKG Y 
Sbjct: 74  VTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTQKRHTDRVQEFVQDLYDKDEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           G Y +  E Y    ++ +  DG    A H  PV+ ++EE YFF+LSAY  KLL +YE++P
Sbjct: 134 GPYCVGCEEYKLPGDLIEAEDGTKLCAVHKKPVEILKEENYFFKLSAYGPKLLEFYEANP 193

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI P   RNEV++FVK GL+DLS+SR TFDWG+ +P D ++++YVWIDAL NY T  GY
Sbjct: 194 GFIQPESARNEVVNFVKQGLEDLSISRSTFDWGVPVPWDEKHVIYVWIDALLNYATAVGY 253

Query: 245 LDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +NP    AKF   +PA++H+IGKDILRFHA+ WPA L++  LP+P +V ++G+++  GE
Sbjct: 254 NENP----AKFDETFPANVHLIGKDILRFHAVIWPAMLMAQGLPVPGRVAANGWLMVGGE 309

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL
Sbjct: 310 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFTARYTSELANDYGNL 369

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  +++++I    ++ +      +  +L     +  +   
Sbjct: 370 ASRVAAMVGKYFGGALPASTADGDAEKAIHEGLAKAVSVADVKIGEELDFQGGILAIFDF 429

Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K   +    R +T+LY   E +R +A+LL   +P+ +  +++ 
Sbjct: 430 VKQVNGYITEQEPWKVAKDESEEGRARLATILYTAAESLRAVAVLLNPIMPETSQALWES 489

Query: 477 L 477
           L
Sbjct: 490 L 490


>gi|303232822|ref|ZP_07319506.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481012|gb|EFL44088.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 562

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/490 (40%), Positives = 287/490 (58%), Gaps = 23/490 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NA PH+G AY  ++ DV AR+ R  G +V F TG DEHG+K+A+AAQ  G 
Sbjct: 22  YITTPIYYVNAAPHLGTAYCTLLCDVQARYRRSMGYNVRFLTGMDEHGEKVAQAAQEHGY 81

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + + + D  +  F+D+   L+ISYDDFIRTTE R +   + LW ++ + G +YKG Y GW
Sbjct: 82  SPQEWCDAQAPLFKDLWKTLNISYDDFIRTTEPRQYKAVQTLWNRMRESGYLYKGTYDGW 141

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           Y L  E Y+   ++   A       +H       P++ +EEE YFF+LSA+QD+LL  Y 
Sbjct: 142 YCLPCETYFTPTQLSHAAQEHQRADEHLCPDCQRPLKRVEEESYFFKLSAFQDRLLELYA 201

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP+F+ P  R NEV SFV+ GL+DLS+SR +FDWGI +P D +++ YVW DAL NY+T+
Sbjct: 202 KHPDFVQPTFRMNEVRSFVEGGLQDLSVSRTSFDWGIPVPFDTKHVTYVWFDALLNYMTS 261

Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             Y ++    K +F   WPA  HV+GKDI+RFH I WPA L++ N  LP+ VF+HGF+  
Sbjct: 262 VFYGEDDPIRKNQFAFRWPAQCHVVGKDIIRFHCIIWPAMLMAINEALPEHVFAHGFLTV 321

Query: 299 K------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           +       EK+SKS GN I P EVI+ +G+D  RY+ + ++  G+D     D +K+  NA
Sbjct: 322 RNSETGNAEKMSKSRGNAIAPQEVIDLLGIDGYRYYFMCDVIHGEDSAISFDRMKQVYNA 381

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRENMQNQLI 410
           DLAN  GNLVSR++SM  K +DG  P        + ++L   V   +  +    M+    
Sbjct: 382 DLANSWGNLVSRTLSMCAKYFDGQTPAIFDGWHDEHNVLRDIVDDGLFADYSAAMEQMRY 441

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT------NPDRASTVLYVTVEVIRQLAILLQA 464
             A   V+ L+   + Y +   PW L KT      +  + + V+   +E IR  A LL  
Sbjct: 442 ADAKEAVMKLIHAANHYIEDMAPWTLAKTAATNDKDAQQLARVMLNLLESIRIAAHLLAP 501

Query: 465 FVPKLANKIF 474
            +P  ++++ 
Sbjct: 502 IMPHTSHEVL 511


>gi|239980679|ref|ZP_04703203.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452539|ref|ZP_06591929.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355488|gb|EFE82390.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 538

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/481 (39%), Positives = 292/481 (60%), Gaps = 11/481 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A   G
Sbjct: 14  FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTADANG 73

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           V+ + + D+  +  ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG Y 
Sbjct: 74  VSPQEWCDKLVTEAWKPLWEHLEIANDDFIRTTEKRHTDRVQEFVQDLWDKGEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y +  E Y    E+  G    A  +       PV+ ++EE YFF+LS Y  +LL +YE
Sbjct: 134 GPYCVGCEEYKLPGELLDGEGDFAGEKLCPVHKKPVEILKEENYFFKLSEYAQRLLDFYE 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P FI P   RNEV++FV+ GL DLS+SR TFDWG+K+P D ++++YVW+DAL NY T 
Sbjct: 194 ANPGFIQPESARNEVLNFVRQGLTDLSISRSTFDWGVKVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  +     A F PAD+H++GKDILRFHA+ WPA L++  LPLP +V ++G++L  GE
Sbjct: 254 AGYGADQARFDATF-PADVHLVGKDILRFHAVIWPAMLMAQGLPLPGRVVANGWLLVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R I+ G+DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISFGQDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  E+++++    ++ +      +  +L     +  +   
Sbjct: 373 ASRVAAMVNKYFGGELPAATASGEAEKAVQEGLAKAVATADRAIGEELDFQSGILAIFDF 432

Query: 421 VSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K + +    R +T+LY   E +R +A+LL   +P  + K++D 
Sbjct: 433 VKQVNGYITEQEPWKVAKDDSEEGRARLATILYTAAESLRAMAVLLNPVMPDTSQKLWDS 492

Query: 477 L 477
           L
Sbjct: 493 L 493


>gi|55981267|ref|YP_144564.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296622|sp|P23395|SYM_THET8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55772680|dbj|BAD71121.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 618

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 293/486 (60%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++    
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD P+G   + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G IP P A  E  E    +  R+   +RE       H AL + ++ V 
Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|157829738|pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus
          Length = 500

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 293/486 (60%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++    
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD P+G   + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G IP P A  E  E    +  R+   +RE       H AL + ++ V 
Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|159029236|emb|CAO87596.1| metG [Microcystis aeruginosa PCC 7806]
          Length = 537

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/498 (41%), Positives = 288/498 (57%), Gaps = 13/498 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ER+   ++T + Y N  PHIG AY  I+ADV+AR+ RL G  VL  TGTDEHGQKI +
Sbjct: 4   LNERKTFALTTPLYYVNDIPHIGSAYTTIVADVMARWKRLQGNSVLLITGTDEHGQKIER 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+  +   D+ + +F ++   L I YD F RTT  RH       ++K+ +KGDIY
Sbjct: 64  TAAAKGLNPQEHCDRIATSFANLWAKLHIQYDRFSRTTAPRHQAIVNEFFEKVWEKGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY +  E +    E+        +   +   +W +EE YFFRLS YQ +L   Y
Sbjct: 124 LDRQQGWYCVACEEFKEKRELLDNGCCPIHT--NLAAEWRDEENYFFRLSKYQAQLEQLY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +  P FI P  RRNEV++FV  GL+D S+SR    WG  IP D Q+ +YVW DAL  Y+T
Sbjct: 182 QEQPNFIQPESRRNEVLNFVNQGLQDFSISRVNVAWGFPIPHDGQHTIYVWFDALLGYVT 241

Query: 241 TTGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
               LD  D      + AK+WP DLH+IGKDILRFHAIYWPA L+SA LPLPK+VF HGF
Sbjct: 242 --ALLDPEDEPTLENALAKWWPIDLHLIGKDILRFHAIYWPAMLMSAGLPLPKRVFGHGF 299

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G K+ KSLGN +DP ++++  G DA+RY+ V+EI  G+DG + +      +NADLA
Sbjct: 300 LTKDGRKMGKSLGNTLDPFDLVDRYGADAVRYYFVKEIELGQDGDFQETRFVNILNADLA 359

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N +GNL++R++ M+ K    + P        +++ L      L  I E   + L  ++A 
Sbjct: 360 NDLGNLLNRTLGMVKKYCQNIPPQLTGVDIPNDNRLKNMGTNLGVIVEQKYDALQFNQAC 419

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++++L+   +++ D   PW L K     A   VLY  +E +R  A LL   +P L++KI
Sbjct: 420 EEILALIRASNKFIDESAPWSLFKQKQQAAVEQVLYAVLESVRLSAYLLSPIIPTLSSKI 479

Query: 474 FDIL-FVADENRCFQSLD 490
           +  L FV D N  F+S D
Sbjct: 480 YQQLGFVIDFN-TFRSED 496


>gi|46580460|ref|YP_011268.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449879|gb|AAS96528.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234204|gb|ADP87058.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 663

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 289/478 (60%), Gaps = 12/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ Y++T I Y NA+PH+GHAY  I+AD + RF RL G D  F TGTDEHG KI +AA+ 
Sbjct: 2   DRFYVTTPIYYVNAKPHLGHAYTTIVADSMRRFQRLLGKDTYFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ K FVD  S  FRD+   L + YD FIRTT+  H    +   +++ D GDIY G Y
Sbjct: 62  AGVSPKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G   Q+   Q  P +++ E+ YFFR+S YQ  L  +   +P
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYIAEKNYFFRMSKYQGWLKQHILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S + SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PDG + A +WP   H++ KDIL+ HA++WP  L +A L     +  HG+ L + 
Sbjct: 238 LGW---PDGDRFANYWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRD 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+ P+E+I+  G++A RYFL+RE+  G D  + ++ L  R+NADLAN +GN
Sbjct: 295 TKMSKSLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR +SM  K + G++P PGA+TE DE++ ++ +   +             AL  +  L
Sbjct: 355 LYSRVLSMTAKYFGGVVPAPGAYTEEDETLRALAAEAQRNFCNLFGRVRFSNALESLWEL 414

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  +++Y D+  PW L K+ +  R  TV+Y  +E +R++A+ L   +P+ A  +   L
Sbjct: 415 VRALNKYVDSAAPWTLFKQGDTKRLGTVMYTLLESMRKVAVHLLPVMPEAATSMLAQL 472


>gi|13357755|ref|NP_078029.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761906|ref|YP_001752278.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508737|ref|ZP_02958215.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701992|ref|ZP_02971615.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|25009406|sp|Q9PQU6|SYM_UREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|11356980|pir||C82922 methionyl-tRNA synthetase UU197 [imported] - Ureaplasma urealyticum
 gi|6899162|gb|AAF30604.1|AE002119_9 methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827483|gb|ACA32745.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675666|gb|EDT87571.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700768|gb|EDU19050.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 521

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/519 (38%), Positives = 310/519 (59%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L+IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K   ++    L V  V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYIEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511
           + L   +      SL       F  HK  D  PIF R +
Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517


>gi|171920487|ref|ZP_02931504.2| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902953|gb|EDT49242.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 521

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/519 (38%), Positives = 310/519 (59%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L+IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K   ++    L V  V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511
           + L   +      SL       F  HK  D  PIF R +
Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517


>gi|218885863|ref|YP_002435184.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218756817|gb|ACL07716.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 657

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/478 (41%), Positives = 286/478 (59%), Gaps = 12/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y NA+PH+GHAY  I+AD L RFHRL G D  F TGTDEHG KI +AA+ 
Sbjct: 2   DRFYITTPIYYVNAKPHLGHAYTTIVADSLRRFHRLLGKDTYFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG + + FVD  S  FRD+   L + YD FIRTT+  H    + + +K+ D GDIY G Y
Sbjct: 62  AGCSPQEFVDGVSTQFRDLWPHLGVEYDQFIRTTDAEHKKCVQDVLQKVYDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G   Q+   Q  P +++ E+ YFFR+S YQ  L  Y   +P
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYISEKNYFFRMSKYQGWLRQYILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   R+EV+  + SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRSEVLGILDSGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PD  K  +FWP   H++ KDIL+ HA++WP  L +A L     +  HG+ L + 
Sbjct: 238 LGW---PDDEKFGRFWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRD 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP+ +I++ G+ A RYFL+RE+  G D  + +D L  R+NADLAN +GN
Sbjct: 295 TKMSKSLGNVVDPLSMIDKYGLSAFRYFLLREMHFGSDASFSEDALVARLNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR +SM  K + G++P  G  TE DE+I ++     +      +      AL  +  L
Sbjct: 355 LFSRVLSMTAKYFGGVVPAQGPLTEEDEAIRTLAEEAQRNYVRLFERVRFSNALESLWEL 414

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  ++RY D   PW L K+ + +R  TV+YV +E +R++A+ L   +P+ +  +   L
Sbjct: 415 VRALNRYVDHAAPWTLFKQGDTERLGTVMYVMLECMRKVAVHLWPVMPEASTVLLGQL 472


>gi|78100832|pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f
           Mutant From Thermus Thermophilus
 gi|119389107|pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna
           Synthetase Y225f Mutant Obtained In The Presence Of
           Peg6000
          Length = 500

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 293/486 (60%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ +VW DAL NY++    
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTFVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD P+G   + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G IP P A  E  E    +  R+   +RE       H AL + ++ V 
Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|302341677|ref|YP_003806206.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638290|gb|ADK83612.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 656

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/484 (40%), Positives = 297/484 (61%), Gaps = 15/484 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  I+ADV  RFH L G      TGTDEHG KIA+AA   G
Sbjct: 5   FYITTPIYYVNAEPHLGHAYTTIVADVARRFHLLLGQTARMQTGTDEHGDKIAEAAAKNG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ + + D+ S  FRD+   L I YD F+RTT+ +H  T R L +K+ D+GDIY   Y G
Sbjct: 65  LSPRQYADRVSGLFRDLWPHLHIQYDRFVRTTDPQHIQTVRALLQKVHDQGDIYFAKYGG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +  D E+ +G    ++     PV ++EEE YFFR+  YQ  L+ + +++P+F
Sbjct: 125 NYCVACERFLTDKELVEGKCPDHHT---EPV-YIEEENYFFRMGKYQQALIEHIQANPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   +NEV+S +   L DL +SR      WG+++P D  ++ YVW DAL NY+T    
Sbjct: 181 IRPERYKNEVLSMLAEPLDDLCISRPKSRLTWGVELPFDQNFVTYVWFDALINYITG--- 237

Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           LD P+G   A+FWP   H+I KDIL+ HAI+WP  L++  LPL +++  HG+      K+
Sbjct: 238 LDYPNGDDFARFWPGQ-HLIAKDILKPHAIFWPTMLMAMGLPLYQRLNVHGYWNVDQAKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+ P+E+ +  GVDA RYFL+RE+A G D  + ++ L +R NADLAN +GNL S
Sbjct: 297 SKSLGNVVRPLELAQVYGVDAFRYFLLREMAFGLDAGFSEELLIQRYNADLANDLGNLYS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R ++M++K ++G++P PG  T +DE +  V ++    +R+  +    H+ LA++  L+  
Sbjct: 357 RVLNMLVKYHNGVVPQPGPLTPADEELAQVAAQARDGLRQGFEAFAFHKGLARLWELIGA 416

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR---QLAILLQAFVPKLANKIFDILFVA 480
            ++Y  A +PW L    P++A  +  V  E++R   Q+A+L+   +P++A  +   + +A
Sbjct: 417 ANKYVVANEPWAL-AAQPEQAPRLARVMHELVRTLAQVAVLIWPVMPEMAETMAGHMGLA 475

Query: 481 DENR 484
              R
Sbjct: 476 HPAR 479


>gi|283957174|ref|ZP_06374638.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791350|gb|EFC30155.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 628

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/477 (41%), Positives = 300/477 (62%), Gaps = 25/477 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P E+++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEIVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN-------MQNQLIHRALAQV 417
            + M  K   G I        S ES+L   +  L +++E+       ++N   +R L ++
Sbjct: 357 IIGMSTKYSQGNI--------SKESVLKFYNAELNQVKEHLNLAVEFLENLQCNRYLEEL 408

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              +S  +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 409 FKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPALPKSCQKV 465


>gi|284929295|ref|YP_003421817.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809739|gb|ADB95436.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 536

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/523 (37%), Positives = 303/523 (57%), Gaps = 20/523 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  ++T + Y N  PH+G AY  +IADV++R+ +L G +VLF TGTDEHGQKI + A+ 
Sbjct: 9   KKFVLTTPLYYANDLPHVGSAYTTMIADVISRYKKLKGEEVLFITGTDEHGQKIERNAEA 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  +   D+   +F+ + D LDI YD F RTT+ +H       ++++ D GDIY    
Sbjct: 69  NNLPAQEHCDRIVSSFKLLWDKLDIQYDRFSRTTDTQHQKIVYEFFQRVWDNGDIYLSRQ 128

Query: 125 SGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY +  E +  + E+ + G    ++N +    +W +EE YFF+LS YQ +L   Y+++
Sbjct: 129 QGWYCVACEEFKEERELLENGCCPVHFNKK---AEWYDEENYFFKLSKYQSQLEELYKNN 185

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P   RNE++ FV  GLKD S+SR    WG  +P+DP + +YVW DAL  Y+T   
Sbjct: 186 PEFIKPKSCRNEILKFVNQGLKDFSISRVNVKWGFTVPNDPNHTIYVWFDALLGYITALL 245

Query: 244 YLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             ++ D +     ++ WP +LH+IGKDILRFHA+YWPA L+SA L LP+ +F HGF+   
Sbjct: 246 ESESKDSTLDNAISQGWPVNLHLIGKDILRFHAVYWPAMLMSAKLSLPEYIFGHGFLTKD 305

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+ KS GN +DP E++ + G D +RY+ ++EI CGKDG +++      VNADLA+ +G
Sbjct: 306 GQKMGKSSGNTLDPFELVNKYGPDPIRYYFLKEIECGKDGDFNETRFINTVNADLADDLG 365

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQVI 418
           NL++R++ M  K  +G++P         E  L      L E + +   N   +    ++ 
Sbjct: 366 NLLNRTLGMTQKYCEGLLPPMSGIDLPKEHPLKKIGLNLGENVIKAYDNLKFNEGCEEIF 425

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +L+   +++ D Q PW L KK        +LY  +E +R +A LL   +P L++KI+  L
Sbjct: 426 TLIRASNKFIDEQAPWTLFKKGEQKEVEKILYGVLESVRLVAYLLAPIIPNLSSKIYKQL 485

Query: 478 -FVADENR--CFQSL---DQRLKPGFMLHKTF----DPIFPRF 510
            F  D N+  C + +   D+  + G + H  F     PIF + 
Sbjct: 486 GFSVDFNQVECLEEVIPFDKHSQWGKLAHNNFLSKPQPIFVKL 528


>gi|120602218|ref|YP_966618.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120562447|gb|ABM28191.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 663

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 288/478 (60%), Gaps = 12/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ Y++T I Y NA+PH+GHAY  I+AD + RF RL G D  F TGTDEHG KI +AA+ 
Sbjct: 2   DRFYVTTPIYYVNAKPHLGHAYTTIVADSMRRFQRLLGKDTYFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ K FVD  S  FRD+   L + YD FIRTT+  H    +   +++ D GDIY G Y
Sbjct: 62  AGVSPKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDNGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G   Q+   Q  P +++ E+ YFFR+S YQ  L  +   +P
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQH---QVKP-EYIAEKNYFFRMSKYQGWLKQHILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S + SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PDG + A +WP   H++ KDIL+ HA++WP  L +A L     +  HG+ L + 
Sbjct: 238 LGW---PDGDRFANYWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRD 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+ P+E+I+  G++A RYFL+RE+  G D  + ++ L  R+NADLAN +GN
Sbjct: 295 TKMSKSLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR +SM  K + G++P PGA+TE DE++ ++     +             AL  +  L
Sbjct: 355 LYSRVLSMTAKYFGGVVPAPGAYTEEDETLRALAVEAQRNFCNLFGRVRFSNALESLWEL 414

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  +++Y D+  PW L K+ +  R  TV+Y  +E +R++A+ L   +P+ A  +   L
Sbjct: 415 VRALNKYVDSAAPWTLFKQGDTKRLGTVMYTLLESMRKVAVHLLPVMPEAATSMLAQL 472


>gi|185178808|ref|ZP_02964601.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024305|ref|ZP_02996992.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|195867767|ref|ZP_03079768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|225551127|ref|ZP_03772073.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209436|gb|EDU06479.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018979|gb|EDU57019.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|195660622|gb|EDX53878.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|225378942|gb|EEH01307.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 521

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/519 (38%), Positives = 309/519 (59%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+I+   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMINNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N D    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNDELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K   ++    L V  V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511
           + L   +      SL       +  HK  D  PIF R +
Sbjct: 481 EQLNFDESFLTLASLASYDILNY--HKVNDSKPIFARII 517


>gi|326778239|ref|ZP_08237504.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658572|gb|EGE43418.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 537

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/481 (40%), Positives = 295/481 (61%), Gaps = 13/481 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   V
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANNV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+     ++ + + LDI+ DDFIRTTEKRH D  +   + + DKG+IYKG Y G
Sbjct: 75  TPQAWCDKLVEEAWKPLWEHLDIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    ++  G +G++   +       PV+ ++EE YFF+LS Y  KLL +Y 
Sbjct: 135 PYCVGCEEYKLPGDLIDG-EGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N +     F PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYGANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R I+ G DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISYGSDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  +++ ++    ++ +      +  +L     +  V   
Sbjct: 373 ASRVAAMVGKYFGGALPEATAAGDAELAVREGLAKAVATADRKIGEELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K T+P+   R +TVLY   E +R +A+LL   +P+ + K+++ 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTSPEGQARLATVLYTAAESLRGVAVLLHPVMPETSQKLWES 492

Query: 477 L 477
           L
Sbjct: 493 L 493


>gi|51244638|ref|YP_064522.1| methionyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875675|emb|CAG35515.1| probable methionyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 645

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/486 (41%), Positives = 292/486 (60%), Gaps = 11/486 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NAQPH+GHAY  I+AD  +RF  L G DV F TGTDEHG+KI +AA+  G 
Sbjct: 4   YITTPIYYVNAQPHLGHAYTTIVADTYSRFRHLCGEDVRFQTGTDEHGEKIVEAAEKNGE 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K +VD+ S  FR    +L I  D++IRTT+  H  T + + +++ DKGDIY   Y+G 
Sbjct: 64  APKEYVDRISGMFRQTWPILGIEPDNYIRTTDANHIATVQKVLQQVYDKGDIYFDKYTGL 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E +  + E+    DG+  + Q  P Q + E+ YFF++S YQ +LL +  ++ +FI
Sbjct: 124 YCRGCERFLTEKEL---VDGKCPDHQTAP-QEIAEQNYFFKMSKYQQQLLDHINANEDFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            P   RNE++SF+   L+DL +SR      WGI++P D  ++ YVW DAL NYLT  G+ 
Sbjct: 180 TPHRYRNEMLSFLSEPLEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALINYLTGLGFP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +  D    KFWP   HVI KDIL+ HAI+WP  L++  LPL KK+  HG+      K+SK
Sbjct: 240 E--DDKYNKFWPVAEHVIAKDILKPHAIFWPTMLMAMELPLYKKLHVHGYWNVDNTKMSK 297

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+ P E+++E G+D LRYF +RE++ G D  +  D +  R N+DLAN +GNL SRS
Sbjct: 298 SIGNVVRPKELVDEYGLDTLRYFTLREMSFGLDASFSSDAIVSRKNSDLANDLGNLFSRS 357

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K   G +P P A  E+D  ++++  +V+   +E M     HRAL  V SLV   +
Sbjct: 358 TAMIQKYRGGKLPAPIA-CEADSELIALSKQVVATYKEEMGAFRFHRALQAVWSLVGYAN 416

Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y  + +PW L K      R  TVLY   E +R LA+L++  +P  A+++   L +A + 
Sbjct: 417 KYIVSNEPWALAKDENAWQRLDTVLYNLAECLRFLALLIRPVMPDTASRMATGLGLATDA 476

Query: 484 RCFQSL 489
               SL
Sbjct: 477 SILNSL 482


>gi|182437585|ref|YP_001825304.1| methionyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178466101|dbj|BAG20621.1| putative methionyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 537

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/481 (40%), Positives = 295/481 (61%), Gaps = 13/481 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   V
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANNV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG Y G
Sbjct: 75  TPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    ++  G +G++   +       PV+ ++EE YFF+LS Y  KLL +Y 
Sbjct: 135 PYCVGCEEYKLPGDLIDG-EGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N +     F PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYGANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R IA G DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  +++ ++    ++ +      +  +L     +  V   
Sbjct: 373 ASRVAAMVGKYFGGALPEATAAGDAELAVREGLAKAVATADRKIGEELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K T+P+   R +TVLY   E +R +A+LL   +P+ + K+++ 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTSPEGRARLATVLYTAAESLRGVAVLLHPVMPETSQKLWES 492

Query: 477 L 477
           L
Sbjct: 493 L 493


>gi|256830947|ref|YP_003159675.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580123|gb|ACU91259.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 648

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/477 (41%), Positives = 289/477 (60%), Gaps = 11/477 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +IST I Y NA+PH+GH Y  I+AD ++RFHRL G    F TGTDEHG KI +AA+ AG
Sbjct: 4   FFISTPIYYVNARPHLGHGYTTIVADSVSRFHRLKGDATFFLTGTDEHGDKIVQAAEAAG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K + D  S+ F+D+  VL++S D FIRTT+ RH    R + + + DKGDIY   Y G
Sbjct: 64  QDPKTYSDTISQLFKDLWPVLEVSNDQFIRTTDLRHKACVRHVLQTVFDKGDIYFDEYGG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y D E+    DG+  + Q  P  +++E+ YFFR+S Y + L  Y E++P+F
Sbjct: 124 HYCFGCERFYTDKEL---VDGKCPDHQTVPT-FIKEKNYFFRMSKYLEPLREYIEANPDF 179

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+S +K  L DL +SR KT   WGI++P D  ++ YVW DAL NY++  GY
Sbjct: 180 IQPERYRNEVLSMLKEDLGDLCISRPKTRLTWGIELPFDSDFVTYVWFDALINYISALGY 239

Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              PDG    K+W    H++ KDIL+ HAI+WP  L+SA +PL K +  HG+      K+
Sbjct: 240 ---PDGEDFRKYWSGAHHLVAKDILKPHAIFWPTMLMSAEIPLYKGLRVHGYWTVNETKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+ P+++ ++ G+ A RYFL+ E++ G+D  + +D L  R NADLAN +GNL S
Sbjct: 297 SKSIGNVVAPLDMAQKYGLSAFRYFLLSEMSFGQDSSFSEDALVGRFNADLANDLGNLFS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM  K + G++P  G   + D  +L +    +   +   ++    RAL  +  LV  
Sbjct: 357 RSLSMTHKYFGGVVPECGELLDLDREVLELGHNAMSNYQSQFEHFQFSRALKSLWELVRH 416

Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D+  PW L K  + +R  TVLYV +E +R++A+ L   +P  +  +   L V
Sbjct: 417 LNKYIDSSAPWTLYKNKDMNRLGTVLYVILEGMRKVAVHLWPVMPSTSETMLTQLGV 473


>gi|16331573|ref|NP_442301.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501033|sp|Q55729|SYM_SYNY3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1001640|dbj|BAA10371.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 532

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/489 (40%), Positives = 284/489 (58%), Gaps = 8/489 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N  PH+G AY  ++AD LARF RL G DVL  TGTDEHGQKI + A+   + 
Sbjct: 11  VTTPLYYVNDVPHLGSAYTTVVADTLARFKRLQGYDVLMITGTDEHGQKIQRTAEAQELD 70

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+    F+++   L+I YD F RTT+ RH    +  ++++ DKGDIY     GWY
Sbjct: 71  PQTHCDRTVVKFKELWRSLNILYDRFSRTTDPRHLAIVKDFFQRVWDKGDIYLAQQQGWY 130

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +    ++ +  D       +   +W +EE YFFRLS YQ  L   Y   PEFI 
Sbjct: 131 CVACEEFKEKRDLLE--DNHCPLHPNRKAEWRDEENYFFRLSRYQHPLEELYAQRPEFIQ 188

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-- 246
           P  RRNEV++FV  GL+D S+SR   DWG  +P+DP + +YVW DAL  Y+T     D  
Sbjct: 189 PSSRRNEVLNFVAQGLQDFSISRVNLDWGFPLPNDPNHTIYVWFDALLGYVTALLDEDEE 248

Query: 247 -NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N   +  K+WP +LH+IGKDILRFHA+YWPA L+SA L +P +VF HGF+   G+K+ K
Sbjct: 249 PNLTNALVKWWPINLHLIGKDILRFHAVYWPAMLMSAELAIPAQVFGHGFLTKDGQKMGK 308

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN +DP+++I   G DA RY+ ++EI  GKDG +++      +NADLAN +GNL++R+
Sbjct: 309 SLGNTVDPLDLINRYGEDAFRYYFLKEIEFGKDGDFNEQRFVNVLNADLANDLGNLLNRT 368

Query: 366 VSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           + M+ K   G  P   A     D  + ++ S + +E+    +      A   + +LV   
Sbjct: 369 LGMVKKYCQGQGPQVMATDLAPDNPLKALGSHLGEEVSSAYERLSFTDACEAIFTLVRAG 428

Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADE 482
           ++Y D   PW+L K+ +      VLY  +E IR  A LL   VP+L+ KI+  L F  D 
Sbjct: 429 NKYIDDMAPWKLFKQGSQKEVEDVLYSVLESIRLSAYLLSPIVPRLSTKIYQQLGFTWDF 488

Query: 483 NRCFQSLDQ 491
           ++    L+Q
Sbjct: 489 DQWRSPLEQ 497


>gi|171920815|ref|ZP_02931489.2| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188518520|ref|ZP_03003990.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|198273255|ref|ZP_03205791.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554038|ref|YP_002284592.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550469|ref|ZP_03771418.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903582|gb|EDT49871.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188997923|gb|EDU67020.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|198249775|gb|EDY74555.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541539|gb|ACI59768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379623|gb|EEH01985.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 521

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/519 (38%), Positives = 308/519 (59%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K    +    L V  V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQKQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511
           + L   +      SL       F  HK  D  PIF R +
Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517


>gi|188524069|ref|ZP_03004160.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195659982|gb|EDX53362.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
          Length = 521

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/519 (38%), Positives = 308/519 (59%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIKLVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K    +    L V  V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQKQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD--PIFPRFL 511
           + L   +      SL       F  HK  D  PIF R +
Sbjct: 481 EQLNFDESFLTLASLASY--DIFNYHKVNDSKPIFARII 517


>gi|317152912|ref|YP_004120960.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943163|gb|ADU62214.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 658

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/481 (41%), Positives = 297/481 (61%), Gaps = 12/481 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ YI+T I Y NA+PH+GHAY   +AD L RFH L G +  F TGTDEHG KI +AA+ 
Sbjct: 2   ERFYITTPIYYVNAKPHLGHAYTTTVADSLRRFHSLMGEETYFLTGTDEHGDKIVQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + + +VD  S  F+ +   ++IS DDFIRTTE RH    + + +K+ D GDIY G Y
Sbjct: 62  NGQSPRDYVDAVSGLFKALLPDMNISNDDFIRTTEPRHIKVVQSILQKVHDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG   + Q  P +++ E+ YFFR+S YQ  L  +  ++P
Sbjct: 122 GGHYCFGCERFYTEKEL---VDGLCPDHQTKP-EYIAEKNYFFRMSKYQGWLKEHIRTNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P + RNEV+S ++SG L+DL +SR      WGI++P D +++ YVW DAL NYL+ 
Sbjct: 178 DFIRPEQYRNEVLSLLESGELEDLCISRPKSRLTWGIELPFDSEFVTYVWFDALINYLSA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY   PDG K  KFWPA  H++ KDIL+ HA++WP  L +A +   + +  HG+ L K 
Sbjct: 238 LGY---PDGDKFKKFWPAANHLVAKDILKPHAVFWPTMLKAAGIEPYQSLNVHGYWLVKD 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNVI+P+ + ++ G+DA RYFL+RE++ G+D  + ++ L  R+NADLAN +GN
Sbjct: 295 TKMSKSIGNVIEPLAIKDKYGLDAFRYFLLREMSFGQDSSFSEEALVGRLNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L +R++SM  K + G+IP+P A    D  I  +    ++  + +  +    R L  +  L
Sbjct: 355 LFNRTLSMTHKYFGGVIPSPDAEEIMDAEIKKLGQDSMRAFQAHFSDLRFSRGLESLWEL 414

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V  +++Y D   PW L K  N  R STV+YV +E +R++A+ L   +P+ +  +   L +
Sbjct: 415 VRGLNKYIDTSAPWTLFKAGNTGRLSTVIYVLLENMRKIAVHLWPVMPESSESMLKQLGI 474

Query: 480 A 480
           +
Sbjct: 475 S 475


>gi|122919781|pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a
           Mutant From Thermus Thermophilus
          Length = 502

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 292/486 (60%), Gaps = 16/486 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++  VW DAL NY++    
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTAVWFDALLNYVSA--- 237

Query: 245 LDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           LD P+G   + FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K
Sbjct: 238 LDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV
Sbjct: 298 MSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ +M+ +  +G IP P A  E  E    +  R+   +RE       H AL + ++ V 
Sbjct: 358 QRTRAMLFRFAEGRIPEPVAGEELAEGT-GLAGRLRPLVRELK----FHVALEEAMAYVK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E
Sbjct: 413 ALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEE 472

Query: 483 NRCFQS 488
            R  ++
Sbjct: 473 VRLEEA 478


>gi|229823542|ref|ZP_04449611.1| hypothetical protein GCWU000282_00840 [Catonella morbi ATCC 51271]
 gi|229786986|gb|EEP23100.1| hypothetical protein GCWU000282_00840 [Catonella morbi ATCC 51271]
          Length = 640

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/489 (40%), Positives = 293/489 (59%), Gaps = 12/489 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           + R+ RL G D  F TGTDEHGQKI + A+  GV+ K +VD+ +   + +  +LDI Y  
Sbjct: 1   MTRYKRLQGFDAFFLTGTDEHGQKIERTAEGLGVSPKQYVDEMADIIKKLWALLDIDYSH 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYY 150
           FIRTT+  H    +  ++++  + DIY G YSGWYS+ DE ++ ++   EVY+ ADG   
Sbjct: 61  FIRTTDDYHEKAVQDAFEQLLAQDDIYLGEYSGWYSVSDEEFFTENQLVEVYRDADGNVT 120

Query: 151 NA---QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKD 206
                  N V  ++EE YFFR+S Y D+L+ YYE H +F+ P  R+ E+I+ F+K GL+D
Sbjct: 121 GGVAPTGNEVTLVKEESYFFRMSKYADRLVQYYEDHADFLEPAFRKTEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR TF WG+ +  +P++++YVWIDAL NY+T  GY  +      K+WPAD HVIGKD
Sbjct: 181 LAVSRTTFTWGVPVKSNPKHVIYVWIDALLNYITALGYGSDDTSRYNKYWPADAHVIGKD 240

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I RFH IYWP  L++  LPLPKK+F+HG+ L K  K+SKS GNVI P  ++E  G+DA R
Sbjct: 241 ISRFHMIYWPTILMALGLPLPKKIFAHGWYLMKEGKMSKSKGNVIYPETLVERYGLDATR 300

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           ++L+ E+  G D  +  +G  + VN++LAN +GNL++R+V+M+ K + G +PT G   T 
Sbjct: 301 FYLLHEMGVGNDAVFTPEGFVQLVNSELANDLGNLLNRTVAMMNKYFQGQVPTEGLEATA 360

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DR 443
            D    +     +    + M    +  AL+ V+ +VS  ++Y D   PW L K      +
Sbjct: 361 VDADYDAYVKEQIAAYYQAMDAMSLSAALSHVMDIVSRTNKYIDETMPWVLVKEEATLGQ 420

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKP-GFMLHK 501
             +V+    E +R +A L + F+ +   KIF+ L ++D+ +  F  L     P G  +  
Sbjct: 421 LRSVMNHLAEALRLVAHLSRPFMTQAPAKIFEQLGLSDQMDLDFTQLVYGAFPAGASVVA 480

Query: 502 TFDPIFPRF 510
              PIFPR 
Sbjct: 481 KGTPIFPRL 489


>gi|82539458|ref|XP_724116.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478651|gb|EAA15681.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 882

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/478 (40%), Positives = 295/478 (61%), Gaps = 11/478 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+TAI+Y N +PHIGHAYE+I+AD +AR+HR  G D+ FTTG DEHG KIA  A
Sbjct: 216 KNDNFYITTAISYVNGEPHIGHAYEIILADAIARYHRNLGRDIFFTTGADEHGLKIANQA 275

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D N   F+ +   L  + D ++RTT   H    + +W K  + GDIY G
Sbjct: 276 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVENGDIYLG 335

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWY++R+E Y  ++E        Y +  +N  ++ M+E  YFFR+S YQD+LL Y  
Sbjct: 336 EYEGWYNVREETYIPENE---AKLMNYIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQYIH 392

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P + RNE++  +K  L+DLS SR  F WGI +P+DP+++MYVW+DAL NY ++
Sbjct: 393 DNPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFTWGIPVPNDPKHVMYVWMDALINYYSS 452

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
             +++N +  K K+WPAD+H+IGKDI+ FHA+ +P  L+SAN+ LPK VFSHGF+L   G
Sbjct: 453 C-FINNQE--KVKYWPADIHIIGKDIVWFHAVIFPTILMSANIELPKCVFSHGFVLAGDG 509

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSL NVIDP E+IE  G DA R+ +V+E   G D  +D D L    N+DLA+ IGN
Sbjct: 510 KKMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNLVDMCNSDLADTIGN 569

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R++S+ +   +  IP    + + D  +       +  I   M+N  IH+   + +++
Sbjct: 570 LVQRTLSLCILSNNAKIPP--LYDDIDIDLPFCMLHFINRIEYYMKNFHIHKFCEKTVNV 627

Query: 421 VSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +++++     PW+ K ++  ++   ++ + +E I  +A  +   VP +A+ IF  L
Sbjct: 628 CKDLNKFLTDLAPWKYKEESEKNKKLHIIRLMLESIYFIAHYIDIVVPMIASNIFSQL 685


>gi|239942576|ref|ZP_04694513.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989037|ref|ZP_04709701.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291446038|ref|ZP_06585428.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348985|gb|EFE75889.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 537

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/481 (39%), Positives = 296/481 (61%), Gaps = 13/481 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   V
Sbjct: 15  YVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANDV 74

Query: 68  TTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG Y G
Sbjct: 75  TPQAWADKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y +  E Y    ++  G +G++   +       PV+ ++EE YFF+LS Y  KLL +Y 
Sbjct: 135 PYCVGCEEYKLPGDLIDG-EGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N +     F PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYGANQEKFDGTF-PANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R I+ G DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISYGSDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
            SR  +M+ K + G +P   A  ++++++    ++ +      +  +L     +  +   
Sbjct: 373 ASRVAAMVGKYFGGALPQDTAAGDAEQAVRDGLAKAVATADRKIGEELDFQGGILAIFDF 432

Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K T P+   R +T+LY   E +R +A+LL + +P+ + K+++ 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTTPEGQARLATILYTAAESLRGVAVLLNSVMPETSQKLWES 492

Query: 477 L 477
           L
Sbjct: 493 L 493


>gi|323698358|ref|ZP_08110270.1| methionyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458290|gb|EGB14155.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 650

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/481 (41%), Positives = 296/481 (61%), Gaps = 12/481 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y NA+PH+GHAY   +AD L RFH+L G +  F TGTDEHG KI +AA++
Sbjct: 2   QRFYITTPIYYVNAKPHLGHAYTTTVADSLNRFHKLMGEETYFLTGTDEHGDKIVQAAES 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD  S+ FRD+   ++IS +DFIRTTE RH    + + +K+ D GDIY G Y
Sbjct: 62  NGQTPQEYVDVISKLFRDLWPNMNISNNDFIRTTEPRHKAVVQQILQKVYDAGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG   +    P +++ E+ YFF++S Y+D LL +   HP
Sbjct: 122 GGHYCFGCERFYTEKEL---VDGLCPDHLTKP-EYIAEKNYFFKMSKYRDWLLDHINKHP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY+  
Sbjct: 178 DFIRPERYRNEVVSLLESGELEDLCISRPKSRLTWGIELPFDADYVTYVWFDALINYVAA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            G+   PDG K  KFWPA  H++ KDIL+ HAI+WP  L +A +   + +  HG+ L + 
Sbjct: 238 LGW---PDGEKFKKFWPAANHMVAKDILKPHAIFWPTMLKAAGIEPYQHLNVHGYWLVED 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV++P+ + +  G+DA RYFL+RE++ G+D  + +  L  R+NADLAN +GN
Sbjct: 295 TKMSKSIGNVVEPLAMKDAYGLDAFRYFLLREMSFGQDSSFSEKALVGRLNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L +R++SM  K + G IP P      D  I  +    +Q  ++   +    RAL  +  L
Sbjct: 355 LFNRTLSMTHKYFGGKIPRPDVEDVVDAEIKKIGQDAMQSFQDFFTDLKFSRALEGLWEL 414

Query: 421 VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V  +++Y D   PW L K+ N  R STV+YV +E +R++A+ L   +P+ + ++ + L +
Sbjct: 415 VRGLNKYIDETAPWALFKEKNTGRLSTVIYVLLENMRKIAVHLWPVMPEASERMLEQLGI 474

Query: 480 A 480
            
Sbjct: 475 T 475


>gi|300867846|ref|ZP_07112488.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300334177|emb|CBN57664.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 535

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/489 (38%), Positives = 288/489 (58%), Gaps = 14/489 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++T + Y N  PH+G AY  + AD  ARF RL G  VL  TGTDEHGQKI + A+
Sbjct: 8   KDTFALTTPLYYVNDLPHVGSAYTTMAADAAARFERLRGKSVLLITGTDEHGQKIQRTAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G + +   D  +  F  + + L+I Y+ F RTT  RH    +  ++++ + GDIY   
Sbjct: 68  SVGRSPQAHCDLIAAGFESLWEQLNIQYNRFSRTTAPRHQFIVKEFFQRVWEAGDIYLSQ 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
             GWY +  E +  + ++  G     + ++   V+W +EE YFFRLS YQ +L   YE  
Sbjct: 128 QQGWYCVSCEEFKEERDLLPGKRCPIHTSKE--VEWRDEENYFFRLSRYQAQLQELYEQR 185

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+ FV +GL+D S+SR   DWG+ +P D ++ +YVW DAL  Y+T   
Sbjct: 186 PDFIQPKSRRNEVLKFVSTGLQDFSISRINLDWGLPVPADDRHTIYVWFDALLGYITA-- 243

Query: 244 YLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            L +PD         +K+WP DLH+IGKDILRFHA+YWPA L+SANLP+P ++F HGF+ 
Sbjct: 244 -LLDPDSEPTLENALSKWWPIDLHLIGKDILRFHAVYWPAMLMSANLPMPGRIFGHGFLT 302

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ K+ GN+IDP+ ++ + G DA+RY+ ++EI  G+DG +++      +NADLAN 
Sbjct: 303 KDGRKMGKTDGNIIDPVALVNQYGSDAVRYYFLKEIEFGEDGDFNEARFIDTLNADLAND 362

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQ 416
           +GNLV+R++SM  K   G+IP   A   + ++ L      L +   +  +N    +A   
Sbjct: 363 LGNLVNRTLSMAHKYCGGLIPNVNAEDIAPDNPLKEIGLTLSDRTAQAYENLAFSQACEA 422

Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++LV   +++ D   PW L K+   +    VLY  +E +R  A LL   +P +++ I+ 
Sbjct: 423 ILALVQAGNKFIDFSAPWSLYKQGKLEAVEKVLYPVLESVRLAAYLLSPIIPNISSAIYQ 482

Query: 476 IL-FVADEN 483
            L F  D N
Sbjct: 483 QLGFAIDFN 491


>gi|290559069|gb|EFD92442.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 483

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/475 (41%), Positives = 292/475 (61%), Gaps = 23/475 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N +PHIGHAY   +ADV AR++RL+G +V F TGTDEHG KI K+A   
Sbjct: 3   KFYITTPIYYVNDKPHIGHAYTTFVADVFARWYRLNGENVFFLTGTDEHGGKIEKSALEK 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K  VD+NS  +R + + L+ISY+ FIRTT+  H    ++  +K+ D GDIYKG Y+
Sbjct: 63  GKTPKELVDENSDKYRQVWEKLNISYNRFIRTTDYSHEKAVKLFLQKVWDNGDIYKGEYT 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y L DE Y  + E+    DG+        VQ + EE YFFRLS Y+DK++    +   
Sbjct: 123 GFYCLPDERYITESEL---LDGKCPTCGRE-VQKISEEAYFFRLSKYKDKIVDAITNG-- 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI+P +  NE++S +   LKDL ++RK   WGIK P D  + +YVW DAL NYL+    L
Sbjct: 177 FIIPEKNANEILSRLNGELKDLDITRKNVSWGIKFPFDESHSVYVWFDALINYLSG---L 233

Query: 246 DNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           D PDG   K FWPAD+H++GK+I+ FH++ WPA L SA +P+PK++ +H +    G+K+S
Sbjct: 234 DWPDGENVKTFWPADIHLVGKEIVWFHSVIWPAMLFSAGIPVPKRIVAHAWWTVDGKKMS 293

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV++PI+++E+ G DA RYFL+RE     DG + +  LK R+N +L + + NLV+R
Sbjct: 294 KSIGNVVNPIDMVEKYGADAFRYFLIREKPVWDDGDFSESALKNRINGELMSDLSNLVAR 353

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +++  K    +   P      DE          +++R    N   + A+  +   + +V
Sbjct: 354 VLTLAEKFKGKITGNPDLEGFIDE----------EKVRAAFDNYDPYSAINLIFEGIRKV 403

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           ++YF+ +KPW L+  +    S VLY  +E IR ++I L  F+P+ + KI  +L V
Sbjct: 404 NKYFNDKKPWTLEGED---LSNVLYNAIEAIRIISIFLSPFMPETSEKIERMLSV 455


>gi|86153308|ref|ZP_01071512.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843034|gb|EAQ60245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 628

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/470 (41%), Positives = 294/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKFYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465


>gi|86152046|ref|ZP_01070258.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124355|ref|YP_004066359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85840831|gb|EAQ58081.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018077|gb|ADT66170.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 628

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/470 (41%), Positives = 294/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKFYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465


>gi|86150271|ref|ZP_01068498.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597490|ref|ZP_01100724.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562466|ref|YP_002344245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|25009405|sp|Q9PP85|SYM_CAMJE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|85839387|gb|EAQ56649.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190082|gb|EAQ94057.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360172|emb|CAL34966.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926083|gb|ADC28435.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 628

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/470 (41%), Positives = 296/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV++GLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +   G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 QNK--GENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK + K+
Sbjct: 416 NLAISKYEPWSLIKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKV 465


>gi|307747746|gb|ADN91016.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 628

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/470 (41%), Positives = 295/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    D    +   N    ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLIN--DCSCPDCGKNTT-ILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H+IGKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLIGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCEKV 465


>gi|291277617|ref|YP_003517389.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964811|emb|CBG40667.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 639

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/480 (42%), Positives = 299/480 (62%), Gaps = 19/480 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  I+AD+L +++ L G +    TGTDEHGQKI ++AQ  
Sbjct: 2   KKFITTPIYYVNDVPHIGHAYTNILADMLKKYYTLLGEETFLLTGTDEHGQKIEQSAQKK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T K + DQ S+ FR++ D   I YD F+RTT+  H    +  + K+  KGDIYKG Y 
Sbjct: 62  HQTPKAYADQISQEFRNLWDYFGIDYDHFVRTTDASHIKGVQEAFSKMYQKGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++    DG+  +   N    ++EE YFF LS YQDKLL +YE   +
Sbjct: 122 GNYCISCESFFAPSQLL---DGKCPDCGRN-TNLIKEESYFFALSKYQDKLLQWYEKS-D 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT 242
            I P  R+NEVI+FVK+GL DLS++R +F WGI +P D   P++I+YVW+DAL NY+T  
Sbjct: 177 CIFPRFRKNEVINFVKNGLNDLSITRTSFAWGIPLPKDLQEPRHIIYVWLDALLNYITAL 236

Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY   PD +  K FW   + ++GKDILRFHAIYWPAFL+S  LPLPK + +HG+ L +G+
Sbjct: 237 GY---PDANFQKDFWENAIQIVGKDILRFHAIYWPAFLMSLELPLPKVICAHGWWLIEGK 293

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P EV E+ G++ LRYFL+RE++ G DG + K  L +R+N DLAN +GNL
Sbjct: 294 KMSKSLGNVVNPKEVGEDYGIEHLRYFLLREVSFGNDGNFAKKSLAQRINTDLANDLGNL 353

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR++ M  K +   +    +  E  + I  + +R L+ +   +Q       L ++ +L 
Sbjct: 354 LSRTLGMAEKYFALHLSGEFSLYEEKKQIEQILAR-LEPLMNEIQPSSYLEELWKIFTLA 412

Query: 422 -SEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            S + +Y    +PW L K    +A+ ++L V   ++ + A+ L   +P+ A KI  +  +
Sbjct: 413 NSLIPKY----EPWNLMKQGQIKATASLLLVIGNILIKGALCLYPIMPETAQKILSVFGI 468


>gi|157415105|ref|YP_001482361.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386069|gb|ABV52384.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 628

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/470 (41%), Positives = 295/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    D    +   N    ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLIN--DCSCPDCGKNTT-ILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCEKV 465


>gi|225620506|ref|YP_002721763.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225215325|gb|ACN84059.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 651

 Score =  368 bits (945), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 206/519 (39%), Positives = 312/519 (60%), Gaps = 18/519 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   HIGH Y  I  D +AR+ ++ G DV F TGTDEHG+KIA+ A+ 
Sbjct: 4   KKFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIARKAEA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T K +VD      +++   L I Y  +IRTT+  H    + ++K + DKG IYKG Y
Sbjct: 64  AGTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGSY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            G Y + DEA++ + +V K  DG++Y       +++ EEE Y+ +LS Y   L+ YY+ H
Sbjct: 124 KGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDYYKEH 183

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEF+ P ER+NE++ +F+  GL+DL++SRK   WGI  P D ++ +YVWIDAL NY+T  
Sbjct: 184 PEFLEPKERQNEMLKNFLLPGLEDLAVSRKGLQWGIPCPVDSEHSIYVWIDALANYITAL 243

Query: 243 GY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
           GY  +  D    K+WPAD+H +GK+I+RFHAI WP  L   ++PLPKKV+ HG++L   G
Sbjct: 244 GYPEEGQDELYKKYWPADVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVYGHGWVLFDDG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+DP  +I++ GVDALRYFL+REI  G DG+Y ++   KR+N+DLAN  GN
Sbjct: 304 KKMSKSSGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLANDYGN 363

Query: 361 LVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L  R  +M+ K ++ ++P      + + ++ +  +   +   +   + +   H AL+ + 
Sbjct: 364 LWHRITTMLGKYFNNILPDEVESVYGDREKELKKMVLTLDANVESALDSYKFHEALSYIW 423

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++   ++Y +   PW L K  T  D  + V+Y++ +V   +   LQ F      K+F+ 
Sbjct: 424 EVIRMTNKYVEESAPWNLAKDETKKDHLANVMYISFQVYYIVTAYLQIFFIDTPKKVFNR 483

Query: 477 LFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPRF 510
           L + D      SLD       LK G  + K  +P+F R+
Sbjct: 484 LGLGDS----VSLDTAKQWGSLKAGIKIEKG-EPLFNRY 517


>gi|258404453|ref|YP_003197195.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796680|gb|ACV67617.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 648

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 193/476 (40%), Positives = 286/476 (60%), Gaps = 11/476 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y NA PH+GHAY  I+AD + RFHRL G +  F TGTDEHG KI +AA++A
Sbjct: 3   RYYITTPIYYVNANPHLGHAYTTIVADCVNRFHRLLGQETFFLTGTDEHGDKIVQAAEDA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G + + +VD+ S  F+     L+IS D FIRTT+  H D  +   +++ D GDIY G Y 
Sbjct: 63  GQSPQEYVDRISSKFQQQLPDLNISNDRFIRTTDSDHKDCVQRFLQQVYDNGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y    E +Y + E+  G    +      P +++EE+ YFFR+  YQD L+ Y + +P 
Sbjct: 123 GYYCFGCERFYTEKELVDGLCPDHLK----PPKYIEEKNYFFRMQKYQDWLVQYIQDNPG 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV+  ++  L DL +SR KT   WGI++P D +Y+ YVW DAL NY+T  G
Sbjct: 179 FIQPERYRNEVLGMLREPLDDLCISRPKTRLTWGIELPFDDRYVTYVWFDALINYITALG 238

Query: 244 YLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +   PDG + + FWP   H++ KDIL+ HAI+WP  L +A L   + +  HG+      K
Sbjct: 239 W---PDGDRYRQFWPVAHHLVAKDILKPHAIFWPTMLKAAGLEPYQGLHVHGYWTVNETK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+ P+ + +  G+D  RYFL+RE+  G D  + ++GL  R NADLAN +GNL 
Sbjct: 296 MSKSLGNVVAPLTMRDTYGLDGFRYFLLREMQFGLDASFSEEGLVARFNADLANDLGNLF 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K + G +P+PGA  + D +I  +  R +Q   ++ ++      L Q+  LV 
Sbjct: 356 NRALAMTHKYFGGRVPSPGALEDEDHAIRQLGVRAVQGYVDSGKSFAFAAGLRQLWDLVR 415

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +++Y DA  PW L K    +R  TV+Y  +E +RQ+A+ L   +P  +  +   L
Sbjct: 416 GLNKYIDATAPWTLYKAGETERLGTVMYTVLEGMRQVALALWPVMPDASGSMLQQL 471


>gi|227486182|ref|ZP_03916498.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235813|gb|EEI85828.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 650

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 195/491 (39%), Positives = 301/491 (61%), Gaps = 10/491 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R+  YI+T I YPN+  HIG+ Y  IIADVL R+  L G +    TGTDEHGQKI +
Sbjct: 1   MTDRKPYYITTPIYYPNSNLHIGNTYTSIIADVLKRYKTLLGYEAYLVTGTDEHGQKIME 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G   + FVD+ +     + + LDI+YD FIR+T K+H      ++ K+ ++GDIY
Sbjct: 61  SAHAHGKEPQEFVDKIAAETIKLWEKLDINYDTFIRSTGKQHEKDVVDIFNKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E ++ + ++    DG+  +   + V + EEE YFFRLS Y DKL   +
Sbjct: 121 KGEYKGYYCTPCETFWTESQL---EDGKCPDCGRD-VNYQEEETYFFRLSKYADKLKELF 176

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEF+ P  R+ E+++ F+  GL+DLS++R +FDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KDHPEFLEPAFRQKEMLNNFINKGLEDLSVTRTSFDWGVDVPFDNKHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY D+ +  + ++WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL +
Sbjct: 237 SAIGYGDDKEKFE-RYWPASVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFE 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  ++E  G DAL+YF++RE   G DG +       R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVELYGNDALKYFMLREFNFGSDGDFSSKKFMDRYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ SMI K   G+I       + D+ ++++         + M +   + AL  +  
Sbjct: 356 NLVSRTTSMISKYNGGVIEKGTEEGKFDDELIALAKETYTRFTDLMDSFKFNEALETIWK 415

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D  +PW L +   N  R + VLY   E +R +A L++  +      I + L
Sbjct: 416 LIRRANKYVDETEPWILGRDEANLPRLNRVLYNLAETLRIVAQLIEPTMKDTTKLILEKL 475

Query: 478 FVADENRCFQS 488
               +N+ F+S
Sbjct: 476 --GTDNKGFES 484


>gi|255527796|ref|ZP_05394647.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508509|gb|EET84898.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 594

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 177/421 (42%), Positives = 272/421 (64%), Gaps = 7/421 (1%)

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
           +K+ + A+  GVT K +VD+     +D+ +++++SYD FIRTT+  H    + ++KK+ D
Sbjct: 5   KKLQRLAEAKGVTPKAYVDEIVAGIKDLWEIMNVSYDKFIRTTDDYHVKAVQDMFKKLYD 64

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +GDIYKG Y GWY    E+++ + +     DG+  +    PV+  +EE YFF++S Y  K
Sbjct: 65  QGDIYKGSYEGWYCTPCESFWTETQ---AVDGKCPDCGR-PVEKAKEEAYFFKMSKYAPK 120

Query: 176 LLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ Y ESHPEFI P  R+NE+I+ F+K GL+DL +SR +FDWGI +  D ++++YVW+DA
Sbjct: 121 LIEYIESHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWVDA 180

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  +      K+WPAD+H++GKDILRFH IYWP  L++  LPLPK+VF HG
Sbjct: 181 LSNYITALGYGSSNSDLYNKYWPADVHLVGKDILRFHTIYWPIMLMALGLPLPKQVFGHG 240

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L  G K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DL
Sbjct: 241 WLLVDGGKMSKSKGNVVDPVLLVNHFGADPVRYYLLREIPFGADGLFNNEIFIKKINSDL 300

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN +GNL+SR+ +M+ K + G IP P A    D+ ++ V     +   + + N  I  AL
Sbjct: 301 ANDLGNLLSRTCAMVEKYFGGTIPAPTAKEAIDDELIKVALNTPKAAEQCIDNLRIPEAL 360

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +  L+   ++Y D   PW L K  +  +R  TVLY  +E +R +++ L AF+P  + K
Sbjct: 361 DCIWELIGRANKYIDETTPWILAKDESKKERLGTVLYNLLESLRIVSVCLSAFLPDTSEK 420

Query: 473 I 473
           I
Sbjct: 421 I 421


>gi|205356336|ref|ZP_03223101.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345721|gb|EDZ32359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 628

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 193/470 (41%), Positives = 295/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV++GLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +   G  AKFWPA +H++GKDILRFH IYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 QNK--GENAKFWPAHVHLVGKDILRFHTIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK + K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALIALCANILAKTSLLLSPTLPKSSQKV 465


>gi|121612346|ref|YP_001000523.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005457|ref|ZP_02271215.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249443|gb|EAQ72403.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 628

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 194/470 (41%), Positives = 294/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLP+ + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPEFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNVE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465


>gi|206603843|gb|EDZ40323.1| Methionyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 673

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 199/479 (41%), Positives = 288/479 (60%), Gaps = 17/479 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LY++T I Y N  PHIGHAY  +  DVLAR  R+ G  V F TGTDEHGQK+ ++AQ A 
Sbjct: 12  LYLTTPIYYVNDIPHIGHAYTTVACDVLARTGRMSGRPVFFLTGTDEHGQKVWQSAQKAN 71

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ +++VD+    FRD+   L IS DDF+RTT+ RH    + +  ++   G+IY+G Y G
Sbjct: 72  LSPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEG 131

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY L DE ++ + +V +G           PV+ + E  YFFR+S +QD L+S+Y  HPE 
Sbjct: 132 WYCLYDERFWTEKDVTEGLCPDC----RRPVEQVRETNYFFRMSRHQDWLVSWYREHPEA 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P  R NE++ F++  L+DL +SR      WGI +P D +Y+ YVW DAL NY++    
Sbjct: 188 IRPESRYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVP-- 245

Query: 245 LDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           L  PDG  A  + WPA  HV+GKDIL  HA+YWP  L +  L  P+ +F+HG+    GEK
Sbjct: 246 LSGPDGEAALKRLWPAT-HVVGKDILTTHAVYWPTLLHAMGLEPPRLIFAHGWWTVNGEK 304

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +DPI+   + G D LRYFL+RE   G+D  +    L  R+NADLAN +GNL+
Sbjct: 305 MSKSRGNAVDPIQYAGKYGPDTLRYFLLREGQFGQDADFSDKALIGRINADLANDLGNLL 364

Query: 363 SRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           SR V+M ++   DG    P   T S E + +   R+L ++ +   N   H+ALA + S V
Sbjct: 365 SRVVAMAIRASKDGQFTRPTGHTLSPE-LAAEAERLLTDVPKFTLNFEFHKALASLWSFV 423

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           S ++R+ D++ PW L + +P +     TVL   +E +R + + L  ++P+ +  IF  L
Sbjct: 424 SVLNRHVDSRAPWVLAR-DPQKQGELETVLSDLLEGLRLVGVYLAPYMPETSAAIFTAL 481


>gi|221054251|ref|XP_002261873.1| methionine--trna ligase [Plasmodium knowlesi strain H]
 gi|193808333|emb|CAQ39036.1| methionine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 885

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 182/477 (38%), Positives = 286/477 (59%), Gaps = 11/477 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK YI+TAI Y N  PHIGHAYE+++AD +AR+H+  G  V FTTG DEHG KIA  A
Sbjct: 218 KKEKFYITTAINYVNGDPHIGHAYEIVLADAIARYHKNIGRRVFFTTGADEHGMKIANQA 277

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   DQN   F+++  +L +  D ++RTT  +H    + +W K     DIY G
Sbjct: 278 ARNNLTPQELCDQNVLKFKELNKLLHVDEDYYVRTTCDKHKKIAQEIWTKCEQNEDIYLG 337

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWY++R+E Y  ++E        Y +  +N  ++ M+E  YFF++S YQ++L++Y  
Sbjct: 338 EYEGWYNVREETYVPENE---AKLMNYRDPLNNIKLEKMKESSYFFKMSKYQERLINYIH 394

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P FI P ++RNE++  +K  L DLS SR  F WGI +P D +++MYVW+DAL NY ++
Sbjct: 395 ENPHFIQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDNKHVMYVWMDALINYYSS 454

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
              +D     K  +WPAD+H+IGKDI+ FH + +P+ L+S N+ LPK VF HGF+L   G
Sbjct: 455 CFIMD----GKEDYWPADVHLIGKDIVWFHTVIFPSILMSVNVDLPKSVFCHGFVLAGDG 510

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGNVI+P E+IE  G DA R+ +++E   G D  +D D L    N+DLA+ IGN
Sbjct: 511 KKMSKSLGNVINPFEIIETYGSDAFRFHVIKETKRGFDMRFDIDNLVDMCNSDLADTIGN 570

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R++S+     +  IP    F E +  +       +  +  +M+   +     + +++
Sbjct: 571 LVQRTLSLCQLSNESKIPP--LFEEYNIDLPFSLLHFINSVEFHMKTYCVQVCCEKTVNV 628

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +++++     PW+ K    ++   ++ + +E I  +A  L  F+P +A++IF  L
Sbjct: 629 CKDLNKFLTELAPWKYKNEEQNKKLHIIRIMMEAIYLIAHYLDIFIPSIASQIFKKL 685


>gi|116747604|ref|YP_844291.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696668|gb|ABK15856.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 636

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 201/517 (38%), Positives = 304/517 (58%), Gaps = 24/517 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y NA+PHIGHAY  I+ADV+ RFH+L G    F TGTDEHG KI +AA +A
Sbjct: 3   RFYITTPIYYVNAEPHIGHAYTTIVADVMNRFHKLMGFGTFFLTGTDEHGDKIVQAAADA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K + D+ S  F++    L+IS D FIRTT+  H    + + +++ D GDI    Y 
Sbjct: 63  GTAPKEYADRISGMFKEAWSKLNISNDHFIRTTDPEHIRVVQHILQQVYDSGDITFSTYR 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E +Y + E+    DG+  +    P++  EE  YFFR+S YQ+ L+ + ES+P+
Sbjct: 123 GLYCVGCERFYTEREL---VDGKCPDHDKEPIE-REEANYFFRMSKYQNWLIEHIESNPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV++F++  L+DL +SR  +   WGI +P D +Y+ YVW DAL NY++  G
Sbjct: 179 FIRPERYRNEVLAFLREPLEDLCISRPKERLAWGITLPFDERYVTYVWFDALINYVSALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D P     +FWP   H I KDIL+ H IYWP  + +A  P+ + +  HG+      K+
Sbjct: 239 YPDGP--LFGEFWPVVQHTIAKDILKPHGIYWPTIIKAAGFPVYRHLNVHGYWKINEGKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS G V+ P+++I   G+DA RYFL+RE+  G D  + +D L +R+N+DLAN +GNL S
Sbjct: 297 SKSRGTVVRPLDMIPLYGLDAFRYFLLREMVFGLDANFSEDALVQRLNSDLANDLGNLFS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R+++M LK +DG +P  G+  +  D  ++S   R + E RE +     H+AL  +   ++
Sbjct: 357 RTLAMTLKYFDGKVPPFGSEPDDMDRDLISRVERTVAEFREELPVFCFHKALMSIWECLN 416

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K  +   R  TV+ + +E+ + +A+L+  F+P  + K+ + L V 
Sbjct: 417 AANKYIDTVGPWGLAKDPSRHGRLETVIRILLELNKTMAVLISPFMPSTSEKMLERLGVV 476

Query: 481 DENRCFQSLDQRL----KPGFMLHKT----FDPIFPR 509
                 +S+D RL    + G ++  T     D +FPR
Sbjct: 477 K-----RSIDLRLAEDGRWGTLVEGTPVSKGDALFPR 508


>gi|57237679|ref|YP_178927.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|57166483|gb|AAW35262.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058288|gb|ADT72617.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 628

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/470 (41%), Positives = 293/470 (62%), Gaps = 11/470 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYE-EKDPI 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV++GLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G   KFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENTKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKV 465


>gi|32266841|ref|NP_860873.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|32262893|gb|AAP77939.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 643

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 198/519 (38%), Positives = 314/519 (60%), Gaps = 26/519 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ I++ I Y N  PHIGHAY  I+ D+L +F++L G DV F TGTDEHGQKI ++AQ 
Sbjct: 3   QKILITSPIYYVNDIPHIGHAYTTILCDMLKKFYQLQGNDVKFLTGTDEHGQKIEQSAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + + D+ S  F+++ +  +I YD F+RTT+  H  + +  ++ +  KGDIYKG Y
Sbjct: 63  HSLDPQSYADKISIRFKELWNEFNIDYDIFVRTTDNMHCLSVQKAFEIMYAKGDIYKGSY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN---PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            G Y +  E ++   ++ +       NA  +   P Q ++EE YFF LS YQ+KLL +Y+
Sbjct: 123 EGHYCISCETFFTQKQLNEN------NACPDCGKPTQIVQEESYFFALSKYQNKLLDWYK 176

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQYIMYVWIDAL 235
           SHP+FILP  R+NE+I FV  GL DLS++R +F+WG+ +P      DD +++MYVW+DAL
Sbjct: 177 SHPDFILPQFRQNEIIKFVNEGLNDLSITRTSFEWGVPLPHNPVRKDDKKHVMYVWLDAL 236

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            +YL+  GYL   D +K  +W   +H +GKDILRFHA+YW AFL+S  LPLP+ +++HG+
Sbjct: 237 LSYLSPLGYLS--DSAKMPYWENAIHFVGKDILRFHAVYWLAFLMSLELPLPQHIYAHGW 294

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G K+SKS+GNVI+P EV    G+++LRYFL+RE+  G+DG + +    +R+NA+L 
Sbjct: 295 WTKDGTKMSKSIGNVINPKEVANAYGIESLRYFLLREMPFGQDGDFSQKAFIERINAELG 354

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           N +GNL++R + M  K +   + +     F   +   L+    ++ + +E M +   HR 
Sbjct: 355 NDVGNLLNRLIGMSEKYFALQVDSVQVEMFFAPE---LNELKNIIAQAQEKMLSMQPHRY 411

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + ++       +      +PW L K++  D+A  +L +   ++ Q ++LL   +P+ A K
Sbjct: 412 VEELWKAFGLGNSVITKYEPWNLIKSHQTDKAMALLGLIANILAQSSLLLYPIMPQSACK 471

Query: 473 IFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
           I + L      + ++ L    +L   F L+K   P+FPR
Sbjct: 472 IANTLNFDINAQNYEKLIKQGQLLASFKLNK-IPPLFPR 509


>gi|57167838|ref|ZP_00366978.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020960|gb|EAL57624.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 628

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 290/475 (61%), Gaps = 21/475 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PH+GHAY  IIAD LARF+RL G +    TGTDEHGQKI +AA+    
Sbjct: 3   YLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y +  E+++        A  Q  N    P        ++EE YFF+LS YQDK+L +Y+ 
Sbjct: 123 YCISCESFF--------AKSQLINECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDK 174

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYL 239
             + ILP  ++NE+I+FV+SGLKDLS++R +FDWGI+IP+   D ++I+YVW+DAL  Y+
Sbjct: 175 E-DPILPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYI 233

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           ++  Y     G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +
Sbjct: 234 SSLDY--QSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKE 291

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNV+ P EV++  G++A RYFL+RE+  G DG + +  L  R+N +L N  G
Sbjct: 292 GEKMSKSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFSESVLINRINTELGNEFG 351

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R + M +K   G I   G   E  ++ L      L      ++N   +R L ++  
Sbjct: 352 NLLNRIIGMSIKYNQGNISQEGVL-EFYKNELDTAKEHLNNAINFLENLQCNRYLEELFK 410

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +S  +      +PW L K N    A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 411 ALSVANLAISKYEPWNLIKANKIKEANALIGLCANILAKTSLLLSPTLPKSCQKV 465


>gi|281356569|ref|ZP_06243060.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316696|gb|EFB00719.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 646

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 184/466 (39%), Positives = 278/466 (59%), Gaps = 9/466 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N +PHIGHAY  I+ADVLAR++R   +D  F TGTDEHGQK+ KAA  
Sbjct: 4   DNFYVTTPIYYVNDKPHIGHAYTTILADVLARYYRSLNVDTFFLTGTDEHGQKVEKAAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+    F+++   L I+ D FIRTT++ H +  R + +++ D+ +IYK  Y
Sbjct: 64  RGVSPKQQADETVVRFQELWKRLGITNDRFIRTTDEYHKEVVREILQELYDRDEIYKAEY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY +  E +Y + ++ +G   +        V  + E  YFFR+S YQ  L+ Y ++HP
Sbjct: 124 TGWYCVGCERFYTEKDLVEGKCPEC----GREVSAIRESNYFFRMSKYQQWLIDYIQTHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P  R NE + F+K  L DL +SR      WGI++P D  Y+ YVW DAL NY++  
Sbjct: 180 DFIQPAFRANETLGFLKRELGDLCISRPKSRLSWGIELPFDADYVCYVWFDALINYISAV 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  N      K+WPA  H+IGKDIL  H++YWP  L +  LP+P+ +F+HG+ L    K
Sbjct: 240 GYRRN-QAEFEKWWPASYHLIGKDILTTHSVYWPTMLKAIGLPMPRTIFAHGWWLTGNTK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P+++IE+ GVDA RYFL+ E++ G D  + ++    R N+DLAN +GNL+
Sbjct: 299 MSKSLGNVVNPMDMIEKCGVDAFRYFLLSEMSPGNDANFSEESFVARYNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR + M L+   G+I  P      D  +       +  +  +++     + L  V++ V 
Sbjct: 359 SRVLKMTLRS-GGVIQPPAELNADDLELNREVETAIAAMETSLKAMKFDQGLNAVMNAVR 417

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             +RY +   PW L KK    R +TVLY   + +R++++LL   +P
Sbjct: 418 AGNRYLEKTAPWALAKKGEVARLNTVLYTAADALRRISVLLAPVMP 463


>gi|295672620|ref|XP_002796856.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282228|gb|EEH37794.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 576

 Score =  366 bits (940), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 197/493 (39%), Positives = 284/493 (57%), Gaps = 13/493 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PHIGH Y MI+ DVL R+  L G  D    TGTDEHG KI +A
Sbjct: 50  DKKPFYVTTPIFYVNAAPHIGHLYTMILGDVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 109

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG+  +   DQN + F+++A  +++  D FIRTT+ +H D  R  W  ++ +G IY 
Sbjct: 110 AAVAGMAPQELCDQNCQTFKNLARTVNVENDHFIRTTDPQHKDAVRHFWDMLNHRGYIYT 169

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V    D   G+   A       VQW  EE Y FRLSA+++ 
Sbjct: 170 AKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQWTSEENYHFRLSAFKEP 229

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL YY++HP FI P    +++++ V SGL+DLS+SR     +WGI +P D   ++YVW+D
Sbjct: 230 LLEYYKNHPNFITPKRYMDDMVNAVSSGLQDLSISRPASRLNWGIPVPSDESQVIYVWLD 289

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   PD      WPAD+ V+GKDILRFH IYWPAFL++  LPLP+++ +H
Sbjct: 290 ALINYITYAGYPFPPDAKS--IWPADVQVVGKDILRFHCIYWPAFLMALGLPLPRQIMAH 347

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS GNV++P   IE  GVD +R+FLV + A   D  YD   + +R    
Sbjct: 348 AHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQVSDSGYDNSYIVERYKKG 407

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L  G+GNL SR +          +   G               + ++ R+ M+     RA
Sbjct: 408 LQWGLGNLASRVLRGKKWSVRSSVVMAGEGRFQRTEHQDFLESIPEKARDEMRQLDPRRA 467

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L  ++ ++ + ++YF   KPW L  +N  + ++V+Y T E +R   ILLQ F+P+ ++K+
Sbjct: 468 LNSIMEIIIQTNKYFHQMKPWTLVMSNLVQLNSVIYSTAESLRIAGILLQPFMPQKSSKL 527

Query: 474 FDILFV--ADENR 484
            D+L V  A E R
Sbjct: 528 LDMLGVERAAEKR 540


>gi|303276647|ref|XP_003057617.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226460274|gb|EEH57568.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 632

 Score =  366 bits (940), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 194/497 (39%), Positives = 281/497 (56%), Gaps = 16/497 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+TAI Y N  PH+GHAYE I  D +AR+HR  G DVL+ TG+DEHGQKIA+AA+ A
Sbjct: 7   KFCITTAINYANGAPHMGHAYEAISTDCIARYHRAYGRDVLYQTGSDEHGQKIAEAAETA 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G       D+    F+D+     ++ D + RTT   HH+ C  L+++  D GDIY   Y 
Sbjct: 67  GCEPIELCDKYVAAFQDLNAKTSVANDVYNRTTSPEHHEACGELFRRSRDNGDIYLDTYE 126

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           GWY++R+E +  + +    A   Y +     P++ M EE YFFR+S YQ +L+ Y E +P
Sbjct: 127 GWYNVREEMFVTETD---AAAADYKDPVSGKPLKKMSEESYFFRMSKYQSRLIEYIEENP 183

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  RRNE+++ ++   L+DLS+SR TFDWGI +PD P +++YVW DALTNYLT  G
Sbjct: 184 EFIQPTRRRNEILARLREDELRDLSVSRTTFDWGIPVPDTPGHVLYVWFDALTNYLTGVG 243

Query: 244 YLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-G 300
           +      DG    FWP  + +IGKDI  FH + WP  L SA +PLPK VF HGF+    G
Sbjct: 244 WPKKEVTDGGN-PFWPPAVQIIGKDITWFHCVIWPCMLFSAKIPLPKTVFGHGFVTASDG 302

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS+GNV+DP+E + +   D+ RY+L+R    G D  + +  L    NADLA+ +GN
Sbjct: 303 QKMSKSIGNVVDPLEQLAKYPSDSFRYYLMRNGVYGSDIPFSEANLVYVHNADLADVLGN 362

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+ ++  K+  G++P        D   L   S         M+N    +     I+ 
Sbjct: 363 LVHRATNLCAKNCAGVVPDVAPERVFDVGALRATS------EHAMKNLETQKCCELAINA 416

Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + + ++Y     PW +K     +R + ++  T+E +   A  L  F+P   + IF+ L  
Sbjct: 417 MKDTNKYLTDAAPWAVKGDGAAERKAVIIRSTLEAVYAAAHFLSPFIPAACDHIFEKLGA 476

Query: 480 ADENRCFQSLDQRLKPG 496
             +     S +  L PG
Sbjct: 477 PAKPIWRLSRESNLTPG 493


>gi|305432137|ref|ZP_07401303.1| methionine--tRNA ligase [Campylobacter coli JV20]
 gi|304444802|gb|EFM37449.1| methionine--tRNA ligase [Campylobacter coli JV20]
          Length = 628

 Score =  366 bits (940), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 290/475 (61%), Gaps = 21/475 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PH+GHAY  IIAD LARF+RL G +    TGTDEHGQKI +AA+    
Sbjct: 3   YLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y +  E+++        A  Q  N    P        ++EE YFF+LS YQDK+L +Y+ 
Sbjct: 123 YCISCESFF--------AKSQLINECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDK 174

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYL 239
             + ILP  ++NE+I+FV+SGLKDLS++R +FDWGI+IP+   D ++I+YVW+DAL  Y+
Sbjct: 175 E-DPILPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYI 233

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           ++  Y     G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +
Sbjct: 234 SSLDY--QSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKE 291

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNV+ P EV++  G++A RYFL+RE+  G DG + +  L  R+N +L N  G
Sbjct: 292 GEKMSKSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFSESVLINRINTELGNEFG 351

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R + M +K   G I   G   E  ++ L      L      ++N   +R L ++  
Sbjct: 352 NLLNRIIGMSIKYNQGNISQEGVL-EFYKNELDTAKEHLDNAINFLENLQCNRYLEELFK 410

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +S  +      +PW L K N    A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 411 ALSVANLAISKYEPWNLIKANKIKEANALIGLCANILAKTSLLLSPTLPKSCQKV 465


>gi|220904688|ref|YP_002480000.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868987|gb|ACL49322.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 670

 Score =  366 bits (939), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 190/476 (39%), Positives = 288/476 (60%), Gaps = 13/476 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I+T I Y NA+PH+GHAY  ++AD +AR+H+L G D LF TGTDEHG KI +AA+  G
Sbjct: 4   FFITTPIYYVNARPHLGHAYTTVVADAMARYHKLAGQDTLFLTGTDEHGDKIVQAAEKEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K FVD  S  F+ +   LD++ D F+RTT+  H  + +   +K+ D GDIY G + G
Sbjct: 64  KSPKEFVDGISARFQALWPRLDVANDRFVRTTDPAHVASVQSFLQKVYDAGDIYFGEFGG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y + E+  G   Q+ +      +++ E+ YFFR+S Y   L  + E +P F
Sbjct: 124 HYCYGCERFYTEKELENGLCPQHLSKP----EFISEKNYFFRMSKYLPWLKEHIEQNPTF 179

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           I P   R EV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++  G
Sbjct: 180 IRPERYRTEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISALG 239

Query: 244 YLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +   PDG+   ++WP + H++ KDIL+ HA++WP  L SA LP  + +  HG+ L +  K
Sbjct: 240 W---PDGADFERYWPGE-HLVAKDILKPHAVFWPTMLKSAGLPQYRHLNVHGYWLVRDTK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P E+ +  G DA RYFL+RE+  G D  +  + L  R+NADLAN +GNL 
Sbjct: 296 MSKSLGNVVEPEEMAQRFGADAFRYFLLREMHFGSDASFSDEALVGRINADLANDLGNLF 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR +SM  K +   +P P  F E+D++I  +C+  ++   +   N    + L  +  LV 
Sbjct: 356 SRVLSMTAKYFGSRVPAPKQFDEADKAIEDLCATAMRNFSQLFGNVQFAQGLESLWELVR 415

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +++Y D+Q PW L K+ N +R +TV+YV +  +R+ A+ L   +P    K+ + L
Sbjct: 416 ALNKYVDSQAPWALHKQGNMERLATVMYVLLAAMRKTALCLWPVMPVACGKMLEQL 471


>gi|94263063|ref|ZP_01286882.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456606|gb|EAT06714.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score =  366 bits (939), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 194/472 (41%), Positives = 281/472 (59%), Gaps = 12/472 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LY++T I Y NAQPH+GHAY  ++AD +ARF RLDG +V F TGTDEHG KI  AA+ A 
Sbjct: 3   LYLTTPIFYVNAQPHLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKIVGAAKEAE 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  + +VD+ S  FR    +L++  D+FIRTT+  H +  + + +++  +GDIY   Y+G
Sbjct: 63  VDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDYAG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +  + E+    DG+  + Q  P + + E+ YFF++S YQ  L+ + + HPEF
Sbjct: 123 LYCRGCERFLTEKEL---VDGKCPDHQVAPAE-IREQNYFFKMSRYQQWLIDHIKEHPEF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+SF+   L DL +SR     +WGI +P D  ++ YVW DAL NY++  GY
Sbjct: 179 ITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D PD   A  W A  H+I KDIL+ HAI+WP  L +  LP  +++  HG+      K+S
Sbjct: 239 PDAPD--FAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYWNVNEAKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+ P +++E+ G D +RYFL+RE++ G D  Y  + +  R NADLAN +GNL SR
Sbjct: 297 KSIGNVVRPQDMVEQFGADTVRYFLLREMSFGLDASYSDEAVLARRNADLANDLGNLFSR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++M+    D  +PTPG  TE D+ +   C  +L      M+     +AL  V  ++   
Sbjct: 357 SLTMVKNFADSRVPTPGTLTEEDQELADACLAMLDSYGRQMREFAFRQALEAVWEVIGRA 416

Query: 425 DRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +RY     PWEL K +PD   R +TVL   +E +R +A  L   +P  A K+
Sbjct: 417 NRYIVTNAPWELAK-DPDQQERLATVLNTLLETLRCIATTLGPVMPGAATKM 467


>gi|296126295|ref|YP_003633547.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018111|gb|ADG71348.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 651

 Score =  366 bits (939), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 203/516 (39%), Positives = 313/516 (60%), Gaps = 12/516 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   HIGH Y  I AD +AR+ ++ G DV F TGTDEHG+KIA+ A+ 
Sbjct: 4   KKFYITTPIYYPSDYLHIGHCYCTIAADTMARYKKIMGYDVYFLTGTDEHGEKIARKAEA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  T K +VD      +++   L I Y  +IRTT+  H    + ++K + DKG IYKG Y
Sbjct: 64  ADTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGAY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            G Y + DEA++ + +V K  DG++Y       +++ EEE Y+ +LS Y   L+ YY+ H
Sbjct: 124 KGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDYYKDH 183

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEF+ P ER+NE++ +F+  GL+DL+++RK   WGI  P D ++ +YVWIDAL+NY+T  
Sbjct: 184 PEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLQWGIPCPVDSEHSIYVWIDALSNYITAL 243

Query: 243 GY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
           GY  D  D    K+W  D+H +GK+I+RFHA+ WP  L   ++PLPKKVF HG++L   G
Sbjct: 244 GYPEDGEDDLYKKYWSCDVHFVGKEIVRFHAVIWPIMLKMLDIPLPKKVFGHGWVLFDDG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+DP  +I++ GVDALRYFL+REI  G DG+Y ++   KR+N+DLAN  GN
Sbjct: 304 KKMSKSRGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLANDYGN 363

Query: 361 LVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L  R  +M+ K ++G++P      F + ++ +  +   +   +   + +   H AL+ + 
Sbjct: 364 LWHRITTMLGKYFNGVLPDEAESVFGDREKELKKMVLTLDANVESALDSFKFHEALSYIW 423

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++   ++Y +   PW L K     D  + V+Y++ +V   +   LQ F  +   K+F+ 
Sbjct: 424 EVIRMTNKYVEESAPWNLAKDEAKKDHLANVMYISFQVYYIVTAYLQIFFVETPKKVFNR 483

Query: 477 LFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           L + D +   +S  +   LK G  + K  +P+F R+
Sbjct: 484 LGLGD-SVSLESAKKWGSLKAGTKIEKG-EPLFNRY 517


>gi|310794257|gb|EFQ29718.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 545

 Score =  365 bits (938), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 189/500 (37%), Positives = 288/500 (57%), Gaps = 20/500 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y NA PHIGH Y MI+ADVL R+  L G   +  TGTDEHG K+ +AA   GV
Sbjct: 12  YVTTPIFYVNASPHIGHMYSMILADVLKRWQVLKGRPAILCTGTDEHGSKVQQAAARQGV 71

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K F D  +  FRD+A  + +  D FIRTT+  H +  +  W  +  KG IY+  + GW
Sbjct: 72  EPKDFCDTTAEKFRDLARAIGMDNDHFIRTTDPDHKEAVQHFWHLLKGKGYIYEAKHQGW 131

Query: 128 YSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           Y + DE +Y  DE+ +      G          N V+W+EE+ Y FR++A +D+LL +Y 
Sbjct: 132 YCISDECFYAADEIERKVVPRTGRTAMVSIESGNEVEWIEEKTYHFRMTALKDRLLEFYT 191

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           ++P++I+P  R NEVI++V + L+DLS+SR  +  DWG+++PDDP   +YVW+DAL NYL
Sbjct: 192 ANPDWIVPRARMNEVIAWVSNNLEDLSISRPVQRLDWGVRVPDDPSQTVYVWVDALINYL 251

Query: 240 TTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T  G+    P       WPAD+HVIGKDI+RFH +YWPA L++ +LPLPK++ +H     
Sbjct: 252 TKAGFPGWQPGREHEGGWPADVHVIGKDIVRFHGVYWPALLMALDLPLPKQLLTHAHWTL 311

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKSLGNV++P   I+  G+D +RYF++R+    KD  Y+   + +R   DL + +
Sbjct: 312 GRKKMSKSLGNVVNPFFAIDRWGLDTMRYFMMRDGGIEKDADYENSFILERYQKDLQSTL 371

Query: 359 G---NLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIH 411
           G   N V++S    L++    +   G F        +++ +  + +   + E+M     +
Sbjct: 372 GNSMNRVAKSKVWKLRNSVAWVGQNGIFRGHAVNGSDALKASVNEMAATMSEHMDQLNPN 431

Query: 412 RALAQVISLVSEVDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            A+  V+S+++EV++Y     PW L    K T+      ++Y   E +R   ILLQ  +P
Sbjct: 432 AAIRSVLSVLAEVNKYLTDTGPWNLYRSTKATDQAELHEIIYHASEAVRCAGILLQPVMP 491

Query: 468 KLANKIFDILFVADENRCFQ 487
                + DIL V  + R F+
Sbjct: 492 AKMGTMLDILGVQVDKRGFE 511


>gi|308802976|ref|XP_003078801.1| methionyl-tRNA synthetase of possible bacterial origi (ISS)
           [Ostreococcus tauri]
 gi|116057254|emb|CAL51681.1| methionyl-tRNA synthetase of possible bacterial origi (ISS)
           [Ostreococcus tauri]
          Length = 700

 Score =  365 bits (938), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 200/475 (42%), Positives = 283/475 (59%), Gaps = 13/475 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++TAI Y N  PH+GHAYE +  DVLAR+HR  G  VLF TG+DEHGQKIA+AA+ 
Sbjct: 25  ETFSVTTAINYANGAPHMGHAYESVSTDVLARYHRAYGRKVLFQTGSDEHGQKIAEAAEV 84

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV    FVD +   FR + + L +S D + RTT + H   C  L+++  D GDIY   Y
Sbjct: 85  AGVAPLAFVDGHVEEFRKLNERLSVSNDVYNRTTSEAHKKACAELFRRSRDNGDIYLDTY 144

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++R+E +  + E    A G         ++ M+EE YFF+ S YQ +L+++ ESHP
Sbjct: 145 EGWYNVREETFVTESEAQ--ASGYKDPVSGKDLKKMKEESYFFKQSRYQAQLIAHIESHP 202

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  RRNE+++ +++  L+DLS+SR TFDWGI +PD P+++MYVW DALTNYLT TG
Sbjct: 203 EFIQPSSRRNEILARLQNDELRDLSVSRTTFDWGIPVPDAPKHVMYVWFDALTNYLTGTG 262

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           + +  D  K  FWPA +H+IGKDI+ FH + WP  L SA L LPK VF HGF+  + G+K
Sbjct: 263 WPEETD--KKDFWPASVHIIGKDIIWFHCVIWPCMLWSAGLQLPKTVFGHGFVTAEDGQK 320

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  V+E+   D  RY+L+R    G D  + +  +    NADLA+ IGNLV
Sbjct: 321 MSKSIGNVVDPNVVLEKFSSDTFRYYLMRCGVYGSDIPFSEAAMVSIHNADLADVIGNLV 380

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++  K   G++P     TE    +L+V +R        M    I  A    I  V 
Sbjct: 381 HRVTNLCNKSCGGVVPD--CATEDIFDVLAVRARS----EAAMAKFNIQAACEAAIEAVK 434

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             ++Y     PW +K     +R + ++  T+E +      LQ ++P     I+++
Sbjct: 435 ATNKYLTDAAPWAVKGEGAEERKAVIIRSTIEAVYVSMHFLQPYIPTACEAIWEL 489


>gi|283954409|ref|ZP_06371929.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794026|gb|EFC32775.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 625

 Score =  365 bits (938), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 194/478 (40%), Positives = 300/478 (62%), Gaps = 27/478 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNF 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISSEFKKLWDEFEITYDIYARTTDIRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEF 186
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +Y E  P  
Sbjct: 123 YCVSCESFFTQSQLINEYSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYQEKDP-- 177

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTG 243
           ILP  ++NE+++FV++GLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  
Sbjct: 178 ILPKNKKNELVNFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLD 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +     G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+
Sbjct: 238 F--QCKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKM 295

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+ P E+++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++
Sbjct: 296 SKSKGNVVKPKEMVDAYGSEAFRYFLLREVPFGIDGDFSENMLINRINAELSNEFGNLLN 355

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN-------MQNQLIHRALAQ 416
           R + M +K   G I        S E++L   +  L + +E+       ++N   +R L +
Sbjct: 356 RIIGMSIKYSQGNI--------SKENVLKFYNAELNQTKEHLNLAVEFLENLQCNRYLEE 407

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +   +S  +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 408 LFKALSVANLAISKYEPWNLIKENKHEQANALIALCANILAKTSLLLSPALPKSCQKV 465


>gi|206895720|ref|YP_002247393.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738337|gb|ACI17415.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 638

 Score =  365 bits (938), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 201/513 (39%), Positives = 289/513 (56%), Gaps = 28/513 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y NA+PH G AY  + AD LAR+HRL G    F TGTDEHGQ I K A   G+
Sbjct: 5   YVTTPIYYVNAEPHAGSAYTTVYADALARYHRLIGDRTFFLTGTDEHGQNILKVANEKGI 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + FVDQ ++ F+D    + IS DDFIRTTE RH    + + + + +KGDIY G Y GW
Sbjct: 65  NPQEFVDQMAQKFKDAWRFMRISNDDFIRTTEPRHEKVVQRVIEIMYEKGDIYLGTYQGW 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y  + E YY ++E+  G           PV+++ EE YFF+ S YQD LL  Y ++P+F+
Sbjct: 125 YCPKCETYYGENELENGN----CPIHKTPVEFVSEESYFFKWSKYQDPLLELYRTNPDFV 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           +P  R NE+ SFV+ GLKD+S+SR +  WGI +P D ++ +YVW DAL NY++  GY D+
Sbjct: 181 VPATRLNEIKSFVERGLKDISVSRTSVPWGIPVPFDTKHTVYVWYDALINYISALGYTDS 240

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
             G K +FWP  +H+IGKDILR HA  WPA L+S  LP+PK+V +HG+ L  G+K+SKS+
Sbjct: 241 --GEKMEFWPG-VHLIGKDILRHHAALWPAMLMSLELPVPKRVVAHGWWLVSGQKMSKSV 297

Query: 308 GNVIDPIEVI----------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           GN+  P +++          E++ VDALRYF++       D     + L    NADLAN 
Sbjct: 298 GNIFSPQDLVSHIENSVGLTEDIAVDALRYFMLAAGPQRDDADLSLEALWGTYNADLAND 357

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNL+ R +  + K   G+   P    +    + +V    LQ+     + + +  AL+  
Sbjct: 358 YGNLLHRVLGFMKK--KGIDTAPKVTGQRYSRVAAVVEEQLQKYHAAYEKEDVQGALSSA 415

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L+  ++ + D +KPW L   + D  +  LY  +E  R    +L   +P  A ++   L
Sbjct: 416 LDLIKFLNDFQDKEKPWTL---SGDDLAEFLYSELEAYRVATTMLSPAMPSAAQRVAATL 472

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 +   SL      GF    T  P+FPRF
Sbjct: 473 ------QTQLSLTFGKVSGFKPDLTQPPLFPRF 499


>gi|124023178|ref|YP_001017485.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123963464|gb|ABM78220.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 515

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 193/513 (37%), Positives = 294/513 (57%), Gaps = 20/513 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  + +D LARF RL+G  V+F TG DEHGQKI + A+   ++
Sbjct: 6   ITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEVNNIS 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   DQ +R+++++    DIS D FIRTT  RH       ++++   GD+Y G   GWY
Sbjct: 66  PQQHCDQITRSYQNLWSRWDISNDRFIRTTSHRHQLLVEAFFQRVETSGDVYLGRQQGWY 125

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y ++      A          P++W +EE  FFRLS +Q ++     S P+FI 
Sbjct: 126 CVDCEEYKDEP---PQAQSPSCPIHQKPLEWRDEENLFFRLSRFQSQIEDLI-SQPDFIW 181

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P+ RRNE+ +FV  GL+D S+SR   DWG+ +P  P++  YVW DAL  YL+    LD  
Sbjct: 182 PVSRRNEIQNFVAQGLRDFSISRIDVDWGLPVPGYPKHTFYVWFDALVGYLS--ALLD-- 237

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG + +        WPA +H+IGKDILRFHA+YWPA L SA LPLPK+VF HGF+  +G+
Sbjct: 238 DGGQVRIERLVECGWPASVHLIGKDILRFHAVYWPAMLSSAGLPLPKQVFGHGFLTREGQ 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP ++IE  G DA+R++L+R+I  G DG + +      VN DLAN IGNL
Sbjct: 298 KMGKSLGNVLDPEKLIEVCGEDAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ +M  K ++G +P+     +    +++     +  +R++M +   H A   ++ L 
Sbjct: 358 LNRTSTMARKWFEGSVPSHRNEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLA 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              + Y +   PW   KT  + A     LY  +E  R + +L+   VP L+ ++ + L +
Sbjct: 418 IAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGL 477

Query: 480 A-DENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           + D N    SL   +L+ G +L  +  P+  R 
Sbjct: 478 SIDSNDWSNSLAWGQLQSGALLPPS-QPVMQRL 509


>gi|299137612|ref|ZP_07030793.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298600253|gb|EFI56410.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 784

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 227/576 (39%), Positives = 312/576 (54%), Gaps = 80/576 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y++T I Y NA+PHIGHAY  I+ADVLAR HRL G D  F TGTDEHGQKI ++A 
Sbjct: 5   RKKFYLTTPIYYVNARPHIGHAYTTIVADVLARRHRLLGDDTFFLTGTDEHGQKIERSAA 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  + F DQ S  FR++ D + ++YD +IRTT+ +H    + L+  + ++G IY   
Sbjct: 65  VAGIAPQQFADQVSIQFRNLWDRMGLTYDRYIRTTDAKHKRGAQKLFADLYERGQIYLSS 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+G YS+ +E +        G DG+       P + + EE +FFRLS YQ  LL   ES 
Sbjct: 125 YTGQYSVGEEIFVEGPPGTIGPDGK-------PTETVTEENFFFRLSEYQRPLLDLIESD 177

Query: 184 PEFILPIERRNEVISF------------------------VKSGLKDLSLSRKTFDWGIK 219
              I P  R+NEV+SF                        VK  L+DLS+SR +F WGI 
Sbjct: 178 TLAITPEARKNEVLSFLRGNVVEGRAAGLEIENSNTGAPYVKGALRDLSVSRSSFTWGIP 237

Query: 220 IPD------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRF 270
           +P+      D +++MYVW+DAL NY+T  GY  +     A+F   WPAD+H++ K+I R 
Sbjct: 238 VPEPAASATDKKHVMYVWLDALANYMTAIGYGSDDPKDTAEFNHYWPADVHIMAKEITRQ 297

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--------- 321
           H IYWPAFLL+ANL LPK V +HG++L    K+SKS GN++    +++  G         
Sbjct: 298 HCIYWPAFLLAANLSLPKAVTAHGWLLFDNSKMSKSKGNIVRTETILDAFGDEVYGKQFP 357

Query: 322 -----------VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                       D LRYFL+REI  G+DG +  D L  R NADLANG GNLVSR++SMI 
Sbjct: 358 DSTKAERDLFASDVLRYFLLREIPFGQDGSFSFDALVTRYNADLANGYGNLVSRTLSMIA 417

Query: 371 KDYDGMIPT-------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           K  DG+IP        P  F  +D    S     + E+  ++       +L+++ SLV+ 
Sbjct: 418 K-RDGIIPEDKDALFDPN-FMGNDVLPYSSIRATVMEVAADLDRSAFSSSLSKLWSLVTL 475

Query: 424 VDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           VD Y     PW+L     K +  +AS +LY   E IR +  +L   +P    K++  L +
Sbjct: 476 VDGYITQYAPWKLVTSDDKVDQYKASFILYSAAESIRIVTAILYPTLPTATAKVWAQLGL 535

Query: 480 AD-----ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
            D      N    +L    LKPG  L     PIFPR
Sbjct: 536 GDIEVAARNGELNNLQWGGLKPGTKLGP-LAPIFPR 570


>gi|197294265|ref|YP_001798806.1| methionyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853592|emb|CAM11463.1| Methionyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 517

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 204/521 (39%), Positives = 312/521 (59%), Gaps = 28/521 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ + K Y+ST+IAY +  PHIG+ YE+I+AD +ARF RLDG DV F TGTDEHGQKI +
Sbjct: 1   MENKTKFYLSTSIAYASGIPHIGNVYEVILADAIARFKRLDGWDVFFQTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A + GV  + +V+  S   + + D++ ISYD FI+TT  +H    ++++ K+  +GDIY
Sbjct: 61  KASSKGVLPQEYVNYISSEIKRIYDLMQISYDRFIKTTNHKHQKAVQVIFTKLLQQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G YS+ +E Y ++ ++    DG+ +N +  P+  + E+ YFF+L+ YQ++LL Y 
Sbjct: 121 LGKYQGLYSVTEEVYVSEKDL---VDGKTFNGEI-PI-LISEDTYFFKLAKYQNRLLDYL 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P  I P  ++ E+++ +K  L DLS+SR +F WGI +P D  +++YVWIDAL+NYLT
Sbjct: 176 ENNPNLIQPETQKKEILNLLKEPLNDLSISRTSFRWGIPVPCDKNHVIYVWIDALSNYLT 235

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
              Y  N + S    ++WP +LHVIGKDILRFH IYWP  L++  + LP+K  +H +IL 
Sbjct: 236 GLDYNPNENTSSKFLQYWPCNLHVIGKDILRFHLIYWPILLMALKIELPQKFLAHPWILF 295

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   ++++   +D +RYF++ EI    DG    + L +R N+ L N  
Sbjct: 296 DKNKMSKSKGNVLYVDDLLKFFPIDTIRYFVLHEIPYASDGNITYELLVERHNSVLVNLF 355

Query: 359 GNLVSRSVSMILKDYDG-----MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           GN+V R   M LK Y       ++  P    E D S       VL  +R+  +   +  A
Sbjct: 356 GNVVHRIFGM-LKSYRNYQLTQILDLPENHQEFDLS--QKVLLVLPLMRQKFEECKVGEA 412

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLA 470
           L +V  L   +++Y D+ KPWEL +  P++ +    VLY   E +R L +LL+ F+P+ A
Sbjct: 413 LEEVEKLARLMNKYIDSVKPWELAQL-PEKETLLNYVLYSLTEALRFLGVLLKPFLPQTA 471

Query: 471 NKIFDILFVADENRCFQSLD-------QRLKPGFMLHKTFD 504
            KI  +  +  E+  F+SL        ++L P  ML +  D
Sbjct: 472 EKI--LCQIQAEDVTFESLKTFGLLKTKKLMPDEMLFQRID 510


>gi|94266428|ref|ZP_01290123.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93452970|gb|EAT03469.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/471 (40%), Positives = 279/471 (59%), Gaps = 10/471 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LY++T I Y NAQPH+GHAY  ++AD +ARF RLDG +V F TGTDEHG KI  AA+ A 
Sbjct: 3   LYLTTPIFYVNAQPHLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKIVGAAKEAE 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  + +VD+ S  FR    +L++  D+FIRTT+  H +  + + +++  +GDIY   Y+G
Sbjct: 63  VDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDYAG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +  + E+    DG+  + Q  P + + E+ YFF++S YQ  L+ + + HPEF
Sbjct: 123 LYCRGCERFLTEKEL---VDGKCPDHQVAPAE-IREQNYFFKMSRYQQWLIDHIKEHPEF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+SF+   L DL +SR     +WGI +P D  ++ YVW DAL NY++  GY
Sbjct: 179 ITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D PD   A  W A  H+I KDIL+ HAI+WP  L +  LP  +++  HG+      K+S
Sbjct: 239 PDAPD--FAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYWNVNEAKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+ P +++E+ G D +RYFL+RE++ G D  Y  + +  R NADLAN +GNL SR
Sbjct: 297 KSIGNVVRPQDMVEQFGADTVRYFLLREMSFGLDASYSDEAVLARRNADLANDLGNLFSR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++M+    D  +PTPG  TE D+ +   C  +L      M+     +AL  V  ++   
Sbjct: 357 SLTMVKNFADSRVPTPGTLTEEDQELADACLAMLDSYGRQMREFAFRQALEAVWEVIGRA 416

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +RY     PWEL K     +R +TVL   +E +R +A  L   +P  A K+
Sbjct: 417 NRYIVTNAPWELAKDPGQQERLATVLNTLLETLRCIATTLGPVMPGAATKM 467


>gi|124515022|gb|EAY56533.1| Methionyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 673

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 198/479 (41%), Positives = 288/479 (60%), Gaps = 17/479 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LY++T I Y N  PHIGHAY  +  DVLAR  R+ G  V F TGTDEHGQK+ ++AQ A 
Sbjct: 12  LYLTTPIYYVNDIPHIGHAYTTVACDVLARTGRMSGRPVFFLTGTDEHGQKVWQSAQKAN 71

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ +++VD+    FRD+   L IS DDF+RTT+ RH    + +  ++   G+IY+G Y G
Sbjct: 72  LSPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEG 131

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY L DE ++ + +V +G           PV+ + E  YFFR+S +QD L+S+Y  HP+ 
Sbjct: 132 WYCLYDERFWTEKDVTEG----LCPDCRRPVEQVRETNYFFRMSRHQDWLVSWYREHPDA 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P  R NE++ F++  L+DL +SR      WGI +P D +Y+ YVW DAL NY++    
Sbjct: 188 IRPESRYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVP-- 245

Query: 245 LDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           L  PDG  A  + WPA  HV+GKDIL  HA+YWP  L +  L  P+ +F+HG+    GEK
Sbjct: 246 LSGPDGESALKRLWPAT-HVVGKDILTTHAVYWPTLLHAMGLEPPRLIFAHGWWTVNGEK 304

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +DPI+   + G D LRYFL+RE   G+D  +    L  R+NADLAN +GNL+
Sbjct: 305 MSKSRGNAVDPIQYAGKYGPDTLRYFLLREGQFGQDADFSDKALIGRINADLANDLGNLL 364

Query: 363 SRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           SR V+M ++   DG    P   T S E + S   R+L ++ +   N   H+ALA + S V
Sbjct: 365 SRVVAMAIRASKDGQFIRPTGHTLSSE-LASEAERLLTDVPKLTLNFEFHKALASLWSFV 423

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           S ++R+ D++ PW L + +P++      VL   +E +R + + L  ++P+ +  IF  L
Sbjct: 424 SVLNRHVDSRAPWVLAR-DPEKQGELEIVLSDLLEGLRLVGVYLAPYMPETSVAIFTAL 481


>gi|253743531|gb|EES99896.1| Methionyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 593

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/558 (35%), Positives = 308/558 (55%), Gaps = 53/558 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+Y++T I Y N +PHIGH +  ++AD L RF +L G +    TGTDEHGQK+ ++A+  
Sbjct: 5   KVYLTTPIYYVNGKPHIGHVFTTLLADTLRRFRKLQGFEPYLMTGTDEHGQKVQQSAEKM 64

Query: 66  GVTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  + + D  ++ F     +   +  D F+RTT   H +    LWK++ D G IYK  Y
Sbjct: 65  GLQPQQWCDNMAKTFETYFVESFGLCPDAFMRTTMPEHAEMAIKLWKRLCDAGLIYKDKY 124

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSY 179
            GWY + DEA+  +  +  G D Q    +       P  ++ EE Y F+LS++Q+ LL +
Sbjct: 125 EGWYCVADEAFVTETNLKAGVDAQGNPCKISADSGQPCVFLSEENYKFKLSSFQEPLLKF 184

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
           Y  +P+ I+P  R+ E++SF++SGL D+S+SR      WGI +P D  ++MYVWIDALT 
Sbjct: 185 YRDNPDIIIPTFRQAEIVSFIQSGLHDISISRSKDKISWGIPVPGDSDHVMYVWIDALTI 244

Query: 238 YLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           YLT  G+  NPDG+  +  WPAD+  +GKDI RFH +YW AFL+ A +P P++ F HG+ 
Sbjct: 245 YLTAAGFTINPDGTFNSGLWPADVQFLGKDIARFHCVYWLAFLMGAGIPCPRRFFIHGWW 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
               +KI KSLGN +DP+ ++E  G+D+++YF++RE +   D    ++ +  RV +DLAN
Sbjct: 305 TVNHQKIGKSLGNALDPMSLVEIYGLDSVKYFMLREGSPANDPSITEELISMRVESDLAN 364

Query: 357 GIGNLVSRSVSMIL----------KDYDG--------------------MIPTPGAFTES 386
            +GNL  R  +  L          K ++G                    ++PT  +  E 
Sbjct: 365 VLGNLTMRCTAESLLPERVWTDPSKLFEGKDFMQIRSCWMSSRMSSIAELLPTDESKREH 424

Query: 387 DESILSV--CSRVL-------QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             S++ +   SR+L       +E+ + M+N  I  AL+++  +++ V+ Y     PW L 
Sbjct: 425 ISSVIKMDDVSRLLDKGFTICEEVVKLMENIDIPGALSKIFEILTGVNNYIQLTMPWSLI 484

Query: 438 KTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQR 492
           K    ++S   V+Y + E++R  A LL  F+P+ A  I D L V  E R  +        
Sbjct: 485 KKEGTKSSHEFVMYCSTELLRICATLLLPFIPQKAPLILDQLGVPAECRVIEKDVLTIGY 544

Query: 493 LKPGFMLHKTFDPIFPRF 510
           +KPG  L +   P+FP+ 
Sbjct: 545 IKPGLALGEKLPPLFPKL 562


>gi|154320610|ref|XP_001559621.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
 gi|150853466|gb|EDN28658.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
          Length = 579

 Score =  363 bits (933), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/503 (36%), Positives = 290/503 (57%), Gaps = 17/503 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  Y++T I Y NA PH+GH Y M++ADV  R+  L G   +  TGTDEHG KI +A
Sbjct: 44  KSKKPFYVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKGNTAILCTGTDEHGMKIQRA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG   K F D  +  F+++A    +S D F+RTT+  H +T   +W  + ++  IY+
Sbjct: 104 AAQAGALPKEFCDIGAETFKELAKRAGLSNDHFVRTTDPDHKETVEYIWYMLREREYIYE 163

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNP---VQWMEEEGYFFRLSAYQDK 175
             + GWY + DE +Y +  + K  D   G+ + A       V+W  E+ Y FRLSA++D+
Sbjct: 164 SKHEGWYCVSDETFYPESAIEKRLDPFTGRTFIASQETGKEVEWTSEKNYHFRLSAFKDQ 223

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +YE +P+F++P+ R  +V++ V  GL+DLS+SR      WGI++PDD    +YVW+D
Sbjct: 224 LLEFYEKNPDFVVPLTRMKDVVNQVSRGLEDLSISRPYDRLSWGIRVPDDETQTIYVWLD 283

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P    A  WPAD+ VIGKDI+RFH IYWPAFLL+ NLP PK++ +H
Sbjct: 284 ALVNYITKAGYPWAPGKETAGGWPADVQVIGKDIVRFHCIYWPAFLLALNLPPPKQILTH 343

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  +K+SKS+GNV++P+  ++  GVD +RY+L+ +    +D  Y  + + +R    
Sbjct: 344 AHWTMDNQKMSKSIGNVVNPLFAMDRFGVDVMRYYLIHDGGIKEDSDYGNEYIVERYKKG 403

Query: 354 LANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSV--CSRVLQEIRENMQNQ 408
           L  G+GNLVSR     + +    +    + G+   +  +I  +   + V  +  E MQ  
Sbjct: 404 LQQGLGNLVSRLTRPKVWNVRSCVEATHSQGSNNSNSTTIRQIDFLNSVRDKANEKMQEL 463

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQA 464
               AL  ++  V E ++Y   + PW L K+      +R  + +Y + E IR + ILLQ 
Sbjct: 464 NAGAALHVIMDTVYETNKYIQHEAPWSLAKSEDPEAKERLISAVYHSAEAIRIVGILLQP 523

Query: 465 FVPKLANKIFDILFVADENRCFQ 487
           ++P+ A+ + D++ V  E R ++
Sbjct: 524 YMPEKASLLLDMIGVLPERRTYE 546


>gi|33863015|ref|NP_894575.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33634932|emb|CAE20918.1| putative methionyl-tRNA synthetase [Prochlorococcus marinus str.
           MIT 9313]
          Length = 515

 Score =  363 bits (932), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 184/478 (38%), Positives = 277/478 (57%), Gaps = 17/478 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  + +D LARF RL+G  V+F TG DEHGQKI + A+   ++
Sbjct: 6   ITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEGNNIS 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   DQ +R+++++     IS D FIRTT  RH       + ++   GD+Y G   GWY
Sbjct: 66  PKHHCDQITRSYQNLWSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQGWY 125

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y ++      A          P++W +EE  FF+LS +Q K+     S P+FI 
Sbjct: 126 CVGCEEYKDEP---PQAQSPCCPIHQKPLEWRDEENLFFKLSRFQSKIEDLI-SQPDFIW 181

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P+ RRNE+ +FV  GL+D S+SR   DWG+ +P  P++  YVW DAL  YL+    LD  
Sbjct: 182 PVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLS--ALLD-- 237

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG + +        WPA +H+IGKDILRFHA+YWPA L+SA LPLPK+VF HGF+  +G+
Sbjct: 238 DGGQVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQ 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP +++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL
Sbjct: 298 KMGKSLGNVLDPEKLLEICGADAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ +M  K ++G +PT     +    +++     +  +R++M +   H A   ++ L 
Sbjct: 358 LNRTSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLA 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + Y +   PW   KT  + A     LY  +E  R + +L+   VP L+ ++ + L
Sbjct: 418 IAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQL 475


>gi|325190049|emb|CCA24532.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 589

 Score =  363 bits (932), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 197/521 (37%), Positives = 302/521 (57%), Gaps = 44/521 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKA 61
           ++ I+T I Y N+ PHIGH +  ++AD LAR++ +    + +D L TTGTDEHG K+ +A
Sbjct: 39  RMMITTPIYYVNSSPHIGHLHSSVLADALARWYNMKKGPNSIDALLTTGTDEHGLKVQQA 98

Query: 62  AQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A+ A       F D  S  FR++    ++ Y +F+RT++ +HH + R  W ++   G IY
Sbjct: 99  AEKANAADYASFCDAISNQFRELFLHANMDYTEFVRTSDSKHHRSVRAFWNQLYGNGYIY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQH-------NPVQWMEEEGYFF 167
            G +  WY   DE++  + +V        G DG+  N  +       + V+ ++E  Y F
Sbjct: 159 LGQHEAWYCQSDESFLTEMQVEDSIRSTAGPDGEIINETYKISKESGHTVEKLKEVNYKF 218

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSLSR--KTFDWGIKI 220
           RLSA+Q  LL + ES P+ I+P  R NEV  +     +K+GL+D+S+SR  +   W I +
Sbjct: 219 RLSAFQQPLLEWLESSPDVIVPKTRYNEVNHYTVRATIKAGLRDISVSRLHEKIKWAITV 278

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFL 279
           PDD Q+ +YVW+DALTNYLT  GY   PD  K  + WP D H++GKDIL+FHAIYWPAFL
Sbjct: 279 PDDSQHCIYVWLDALTNYLTCAGY---PDAEKLDRVWPPDYHIVGKDILKFHAIYWPAFL 335

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++A LPLPK++ +H     K  K+SKSLGNV++P E+I++ G DA+RY+L+RE   G DG
Sbjct: 336 MAAGLPLPKRIVAHAHWTVKDIKMSKSLGNVVNPFEIIKKYGTDAVRYYLLREGVLGSDG 395

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVL 398
            +    L+ R++++LA+ +GNLVSRS +      DG +P  P   T  D  ++     + 
Sbjct: 396 DFKLSLLENRLSSELADTLGNLVSRSTARSFL-VDGSVPRRPITLTPDDLELMKEGDAIA 454

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-------------KTNPDRAS 445
            ++  + Q    H+ L ++I  + +++RYF + +PW LK             +   +R  
Sbjct: 455 AKVAVDFQIPDFHQGLQRIILYLHKLNRYFSSNEPWVLKTALDSQTLRPAEAEQATERLQ 514

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +L +T++  R   ILLQ  +P+ A +I D L V    R F
Sbjct: 515 GILNITIDATRLCTILLQPAIPEAAERILDYLGVPRNERAF 555


>gi|254431009|ref|ZP_05044712.1| methionyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625462|gb|EDY38021.1| methionyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 533

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 187/480 (38%), Positives = 275/480 (57%), Gaps = 16/480 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N + H+G  Y  +  D +AR+ RL G  V+F TG DEHGQKI + A+ AGV+
Sbjct: 5   LTTPLYYVNDRAHLGSTYTTLACDAIARYQRLCGEQVVFITGCDEHGQKIQRTAEAAGVS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  +RD+ D   IS+D FIRTT+ RHH+     + ++  +GD+ +G   GWY
Sbjct: 65  PQDHCDRISAGYRDLWDRWQISHDRFIRTTDPRHHELVAQFFARVEARGDVVEGRQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D    +  +   +     P++W +E   FFRLS YQ ++ +   + P+FI 
Sbjct: 125 CVACEEFKDDPHEAQDPECPTHR---RPLEWRDEVNLFFRLSRYQAEIEALI-AQPDFIQ 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR EV +FV  GL+D S+SR    WGI +P  P +  YVW DAL  YL+     D  
Sbjct: 181 PPSRRREVENFVAQGLRDFSISRIDLPWGIPVPGHPGHTFYVWFDALLGYLSALLAADGS 240

Query: 249 --------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
                   D    + WPA LHVIGKDILRFHA+YWPA LLSA LPLP++VF HGF+  +G
Sbjct: 241 GPPGPVDLDALLQRGWPAQLHVIGKDILRFHAVYWPAMLLSAGLPLPRQVFGHGFLTREG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+ KSLGNV+DP  ++E  G D +R++L+R+I  G DG + +      VN DLAN IGN
Sbjct: 301 QKMGKSLGNVLDPEVLLERCGRDPVRWYLLRDIPFGDDGDFQQQRFTDLVNNDLANTIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R+ SM  K +DG +P  G  +  D  +        ++    ++     RA   V+ L
Sbjct: 361 LLNRTSSMARKWFDGAVPPAGEASAGDHPLAQATRLAGEQACAGLERLDFRRAAEAVLQL 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  + Y + Q PW+  K  PD+ + V   LY  +E  R +A+LL   VP+L+ ++   L
Sbjct: 421 ATAANGYLNDQAPWKRMKL-PDQETGVAADLYAVLEATRSVAVLLAPLVPELSARMLHQL 479


>gi|50954430|ref|YP_061718.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950912|gb|AAT88613.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 589

 Score =  363 bits (931), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 191/481 (39%), Positives = 290/481 (60%), Gaps = 10/481 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++     YI+T I Y N  PHIGHAY  + ADVL R+HR  G DV    GTDEHGQKI +
Sbjct: 6   LRNASSFYITTPIFYVNDVPHIGHAYTEVAADVLVRWHRQAGEDVWLLAGTDEHGQKILR 65

Query: 61  AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A    ++   + D+   + +R + + L IS DDFIRTTE RH          + +KG +
Sbjct: 66  TAAAQRLSPAEWTDRLVHDSWRPLLEALRISADDFIRTTEDRHKVVVIAFLTLLREKGLV 125

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQH-NPVQWMEEEGYFFRLSAYQDK 175
           Y+G Y G+Y +  E Y  + ++  G     GQ     H   V  + E+ YFF++SA+QD+
Sbjct: 126 YEGTYEGFYCVGCEEYKQESDIIAGTGAFAGQVLCPVHARSVDVVNEKNYFFKMSAFQDR 185

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL    +  EF+ P   RNE+++FV SGLKD+S++R +FDWG+++P +P +++YVW DAL
Sbjct: 186 LLEML-ADEEFLRPAAVRNEILAFVGSGLKDISITRSSFDWGVEVPWEPGHVVYVWFDAL 244

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY++  G+  + +    + WP D+H+IGKDI R HA+ WPA L++A+LP+PK++ +HG+
Sbjct: 245 LNYISGIGWGSDVEEFDRR-WP-DVHIIGKDIARLHAVLWPAMLMAADLPVPKRIVAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P ++++  G+DA RY+ VR I  G+DG +  D + +R NADLA
Sbjct: 303 LLVNGEKMSKSNATGIGPEQIVKAFGIDAFRYYFVRSIVFGQDGSFSWDDIHRRYNADLA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG+GNLVSR+++MI K   G++P   A T +++ +    ++        +    +  AL 
Sbjct: 363 NGLGNLVSRTIAMITKYRAGIVPEAAAPTAAEDEVRHTITQARANASAAIDRFALSEALG 422

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           QV ++V  ++ Y   Q PW L +      R  TVL    E +R+LA+LL+ F+P  A  I
Sbjct: 423 QVWTIVERLNSYITEQTPWSLARDEAQAHRLDTVLNTVAEGLRELAVLLRPFLPDTAQAI 482

Query: 474 F 474
           +
Sbjct: 483 W 483


>gi|156081857|ref|XP_001608421.1| methionine- tRNA ligase [Plasmodium vivax SaI-1]
 gi|148800992|gb|EDL42397.1| methionine- tRNA ligase, putative [Plasmodium vivax]
          Length = 886

 Score =  362 bits (929), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 282/477 (59%), Gaps = 11/477 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK YI+TAI Y N  PHIGHAYE+++AD +AR+H+  G  V FTTG DEHG KIA  A
Sbjct: 218 KEEKFYITTAINYVNGDPHIGHAYEIVLADAIARYHKNIGRKVFFTTGADEHGLKIANQA 277

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D+N   F+++  +L +  D ++RTT ++H    + +W K  +  DIY G
Sbjct: 278 ARNNLTPQELCDRNVLKFKELNKLLHVDEDYYVRTTCEQHKKIAQEIWTKCEENKDIYLG 337

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWY++R+E Y  ++E        Y +  +N  ++ M+E  YFF +S YQ +L+ Y  
Sbjct: 338 EYEGWYNVREETYVPENE---AKLMNYRDPLNNIKLEKMKEPSYFFNMSKYQQRLIDYIM 394

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P FI P ++RNE++  +K  L DLS SR  F WGI +P D +++MYVW+DAL NY + 
Sbjct: 395 ENPHFIQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDHKHVMYVWMDALINYYSN 454

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
              ++     K  +WPAD+H+IGKDI+ FH + +P  L+S N+ LPK VF HGF+L   G
Sbjct: 455 CFIVE----GKEDYWPADVHLIGKDIVWFHTVIFPTILMSVNVALPKSVFCHGFVLAGDG 510

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGNV++P E+IE  G DA R+ +++E   G D  +D D L    N+DLA+ IGN
Sbjct: 511 KKMSKSLGNVVNPFEIIESYGPDAFRFHVIKETKRGFDMRFDIDNLVDMCNSDLADTIGN 570

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R++S+     +  I  P  F + D  +       +  +  +MQ   +     + +++
Sbjct: 571 LVQRTLSLCQLSNESKI--PPLFEQYDIDLPFSLLHFINRVEFHMQTYCVQVCCEKTVNV 628

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +++++     PW+ K    D+   ++ + +E I  +A  L  F+P +A+++F  L
Sbjct: 629 CKDLNKFLTELAPWKYKNEEKDKKLHIIRIMMEAIYLIAHYLDIFIPSIASQVFQKL 685


>gi|303248590|ref|ZP_07334846.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490031|gb|EFL49953.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 651

 Score =  362 bits (929), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 283/473 (59%), Gaps = 10/473 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+T I Y NA+PH+GHAY  I+ D LARFH L G +V F TGTDEHG KIA+AAQ A
Sbjct: 3   RFFITTPIYYVNAKPHLGHAYTTIVVDALARFHALLGEEVFFLTGTDEHGDKIAEAAQKA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K + D  S  F  +   L I+   FIRTT+  H +  +   + + DKGDIY G Y 
Sbjct: 63  GQTPKEYADSISGLFSSLWPKLGIAPRRFIRTTDPDHKEAVKKALQLVYDKGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG   + +  P +++ E+ YFFR+S YQ  LL + +++P+
Sbjct: 123 GHYCKGCERFLTEKEL---VDGLCPDHKVKP-EYIAEKNYFFRMSKYQGALLEHIKANPD 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P + RNEV+S ++SG L+DL +SR      WGI++P D  ++ YVW DAL NYLT  
Sbjct: 179 FIRPRQYRNEVVSLLESGALEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALMNYLTAI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D+PD SK  +W    HV+ KDIL+ HA++WP  LL+  LPL K++  HG+ L +  K
Sbjct: 239 GWPDDPDFSK--WWDVAEHVVAKDILKPHAVFWPTMLLAMGLPLYKRLNVHGYWLVRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVI+P+ + E+ G+  +RYFL+RE+  G D  +  + L  R NADLAN +GNL 
Sbjct: 297 MSKSLGNVIEPLAMAEQAGLSGMRYFLLREMVFGSDASFSDEALIGRFNADLANDLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K + G +P   A   +D  +  +    +    +        RAL  +  LV 
Sbjct: 357 NRALAMTTKYFGGTVPASDAPQAADAELARLGREAMANFVQLFGAAQFSRALEALWELVR 416

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +++Y DA  PW L K+ +  R  TV+   +  +RQ+A+ L   +P+ A K+ 
Sbjct: 417 GLNKYIDAMAPWTLFKEGDTARLGTVMATVLGGLRQVAVCLLPVMPEAAEKLL 469


>gi|302038229|ref|YP_003798551.1| methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606293|emb|CBK42626.1| Methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 663

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 210/526 (39%), Positives = 300/526 (57%), Gaps = 30/526 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R+  YI+T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TG DEHGQK+ +
Sbjct: 1   MNKRDTFYITTPIYYVNDVPHIGHAYTTVAADVLARYWRLRGRDVFFLTGLDEHGQKVQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGV  +   D+ +  F ++   L+IS D FIRTT+K H    +   +++ DK  IY
Sbjct: 61  AAAKAGVAPQAHCDRLAPQFTNLWQRLNISNDAFIRTTDKPHQAVVQRYLQQLYDKQLIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWY   DE ++ + +V  G           P++ + E  YFF++  YQ++L+ + 
Sbjct: 121 KADYTGWYCTYDERFWTEKDVVNGLCPDC----KRPIERLSEHNYFFKMGQYQERLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVKS-GLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
            +H +FI P+ RRNEV+ F+++  L DLS+SR      WGI++P D +Y+ YVW DAL N
Sbjct: 177 RTHDDFIRPVSRRNEVLGFLQTQKLGDLSISRPKSRLSWGIELPFDKEYVTYVWFDALVN 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y++   Y    +    +FWPAD H++GKDIL  HA+YW   L++   PLP  +F+HG+  
Sbjct: 237 YVSALEYKPGLE----RFWPADAHLVGKDILTTHAVYWSTMLMALERPLPHSIFAHGWWT 292

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNV+DP  +I++ G DA RYFL+RE+  G+DG + +  +   +N+ LANG
Sbjct: 293 VDGEKMSKSRGNVVDPNAMIDQFGADAFRYFLLREVPFGQDGDFSRTTMVTTINSALANG 352

Query: 358 IGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           IGNL+SR+++MI +   G IP   P    E ++ I  V  ++   I       L    L 
Sbjct: 353 IGNLLSRTLTMIERSCAGTIPDRGPAVLPELEQRIEDVARQLPGRIEAGYNALLFRDVLL 412

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            V  L S  D Y D   PW+L K  P+   +  TVL  +   +R LAILL  F+P  A +
Sbjct: 413 MVEELNSACDEYIDKSAPWKLAK-QPEAQPQLHTVLNTSARALRLLAILLYPFMPTAAQQ 471

Query: 473 IFDILF--------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   L         V+DEN    S D+ L  G  + K    +FPR 
Sbjct: 472 MIHQLGLSLDLSQPVSDEN---SSWDKTLA-GSRIQKGAS-LFPRI 512


>gi|300870561|ref|YP_003785432.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688260|gb|ADK30931.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 649

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 209/520 (40%), Positives = 315/520 (60%), Gaps = 22/520 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   HIGH Y  I  D +AR+ ++ G DV F TGTDEHG+KI + A+ 
Sbjct: 4   KKFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIQRKAEE 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  T K +VD      + +   L I Y  +IRTT+  H    + ++K++ DKG IYKG Y
Sbjct: 64  AKTTPKEYVDNIVDATKKLWKRLHIDYSHYIRTTDDYHERRVQNIFKQLYDKGYIYKGSY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            G Y + DEA++ + +V K  DG+ Y       +++ EEE Y+ +LS + D L++YY+ H
Sbjct: 124 KGLYCVSDEAFFTESQVVKKDDGKCYCPDCEKELEYKEEECYYLKLSEFGDWLINYYKEH 183

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEF+ P ER+NE++ +F+  GL+DL+++RK   WGI  P D ++ +YVWIDAL+NY+T  
Sbjct: 184 PEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLKWGIPCPIDNEHSIYVWIDALSNYITAL 243

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
           GY +  +  K K+WP D+H +GK+I+RFHAI WP  L   ++PLPKKVF HG++L   G+
Sbjct: 244 GYSEEDELYK-KYWPCDVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVFGHGWVLFDDGK 302

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP  +I++ GVDALRYFL+REI  G DGFY ++   KR+N+DLAN  GNL
Sbjct: 303 KMSKSRGNVVDPNALIDKYGVDALRYFLMREINFGVDGFYSQEIFLKRINSDLANDYGNL 362

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE----IRENMQNQL----IHRA 413
             R  +M+ K +DG++P      E  ES+ S   R L++    +  N+++ L       A
Sbjct: 363 WHRITTMLGKYFDGILP------EEVESVYSDRERELKKAVLTLDANVESALDSFKFQEA 416

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  ++  V++Y +   PW L K  +  D  + V+Y++ +    +   LQ F  +   
Sbjct: 417 LFNIWEVIRMVNKYVEESAPWNLAKDESKRDHLANVMYISFQAYYIVTAYLQIFFVETPK 476

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L + D      +     LK G  + K  +P+F R+
Sbjct: 477 KVFNRLGLGDSVPLEDAKKWGSLKAGIKIEKG-EPLFNRY 515


>gi|297566227|ref|YP_003685199.1| methionyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850676|gb|ADH63691.1| methionyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 642

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 204/481 (42%), Positives = 289/481 (60%), Gaps = 19/481 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI Y NA PHIGH YE I+AD LAR+HRLDG    F TGTDEHG+KIA+AA  AG 
Sbjct: 6   YITTAIDYANAAPHIGHVYEKILADFLARWHRLDGYQTYFLTGTDEHGEKIARAAAKAGK 65

Query: 68  TTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + K FVD+ S  +FR + D L ISYDDFIRTT++RH    + + +++ + GDIY   Y G
Sbjct: 66  SPKEFVDELSEGSFRALYDRLQISYDDFIRTTQERHKKYVQQVLQRVYEAGDIYYAEYEG 125

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+  E +  + E+  G           P     E  YFFR+  Y+  LL + + +PEF
Sbjct: 126 LYSVGAERFVTEKELVDGV----LPGDSEPPVLRREANYFFRMEKYRPWLLEHLQQNPEF 181

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P+  RNEV+  +K  + DLS+SR  +   WGI IP D  ++ YVW DAL NY++    
Sbjct: 182 IQPVGYRNEVLEMLKEPIGDLSISRPKERVPWGIPIPWDENHVTYVWFDALLNYVSAL-- 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
                G    +W    HVIGKDIL+ HA++WP  L +A LPL +K+  HG IL   G K+
Sbjct: 240 --VSKGIFEPYWRHCWHVIGKDILKPHAVFWPTMLKAAGLPLYEKLVVHGHILALDGRKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGN IDP E++E+ GVDAL Y L+R+     D  + +  +  R+N+DLAN +GNL+S
Sbjct: 298 GKSLGNAIDPAEMLEKYGVDALHYALLRDTTLAADSPFGEPVIVSRLNSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  +M+LK   G++P P GA ++     +S+ ++V   IRE   N     AL +++  V 
Sbjct: 358 RVRTMLLKYCGGVLPEPSGADSDIAREGVSLAAKVRPLIRELRFNL----ALEEILQYVR 413

Query: 423 EVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y + QKPWEL + +  + +   VLY  VE +R  ++LL+A +P  A ++   L + 
Sbjct: 414 SLNKYVNDQKPWELARDDSRKKTLEEVLYTVVEGLRIASVLLEAALPNKAKELRSGLGLG 473

Query: 481 D 481
           D
Sbjct: 474 D 474


>gi|261204906|ref|XP_002627190.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592249|gb|EEQ74830.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239611595|gb|EEQ88582.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327348391|gb|EGE77248.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 580

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 290/503 (57%), Gaps = 22/503 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 51  DKKPFYVTTPIFYVNAAPHVGHLYTMIVADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN   F+++A   ++ YD FIRTT+  H +  R  W  ++ +G IY 
Sbjct: 111 AAALGMTPQELCDQNCLTFKNLARKGNVEYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V    D                VQW  EE Y FRLSA+++ 
Sbjct: 171 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSVETGKEVQWTSEENYHFRLSAFKEP 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P FI P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 231 LLEHFRKNPGFITPRNYMDGIVSDVSSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P GSK+  WPA++HV+GKDILRFH IYWPAFL++ +LPLP+++ +H
Sbjct: 291 ALVNYITYAGY-PFPHGSKS-IWPANVHVVGKDILRFHCIYWPAFLMALDLPLPRQILAH 348

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   IE  G+D +R++L  + A   D  Y+   + +R    
Sbjct: 349 GHWTINHEKMSKSTGNVVNPNFAIERFGIDTMRFYLTIDGAQSSDSDYENSYIIERYKKG 408

Query: 354 LANGIGNLVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           L  GIGNL SR +      ++D   ++ T G  T      L     + + ++  M+    
Sbjct: 409 LQWGIGNLTSRLLRGKKWNVRD-SIVMATEGQLTRDKHHDL--LEMIPERVKAEMEQLDP 465

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFV 466
            RAL  ++ ++ + ++YF   +PW L K     NP++ + VLY T E +R   ILLQ F+
Sbjct: 466 RRALNSIMEIIYQTNKYFHEMQPWSLVKNPSADNPNQLNDVLYTTAESLRIAGILLQPFM 525

Query: 467 PKLANKIFDILFVAD-ENRCFQS 488
           P+ + ++ D+L VA+ E R F +
Sbjct: 526 PQKSLELLDMLGVAEVEKRNFNA 548


>gi|116074880|ref|ZP_01472141.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068102|gb|EAU73855.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 514

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 187/474 (39%), Positives = 268/474 (56%), Gaps = 9/474 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  +  D LARF RL+G DV+F TG DEHGQKI + A + GVT
Sbjct: 5   LTTPLYYVNDKPHLGSTYTTLACDALARFQRLEGNDVVFITGVDEHGQKIQRTAADRGVT 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D  ++ +  +     IS D F+RTTE+RH       +K+    GDI  G  +GWY
Sbjct: 65  PQEHCDAITKRYISLWSDWGISNDRFVRTTEERHLPLVEAFFKRCEANGDIRIGRQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +   DE  +  D  Y       ++W +EE  FF LS +QDK+     S P+FI 
Sbjct: 125 CVGCEEF--KDEPPEAKD-PYCPIHQKALEWRDEENLFFCLSNFQDKIEQLI-SQPDFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245
           P  RR E+ +FV  GL+D S+SR    WG+ +P  P +  YVW DAL  YLT     G  
Sbjct: 181 PANRRKEIQNFVAGGLRDFSISRVNVSWGLPVPGHPGHTFYVWFDALLGYLTALLDDGGT 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D   +  WPA +HVIGKDILRFHA+YWPA L+SA LP+P +VF HGF+  +G+K+ K
Sbjct: 241 VDLDRLASVGWPAQMHVIGKDILRFHAVYWPAMLMSAGLPVPARVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL++R+
Sbjct: 301 SLGNVLDPELLLERCGTDAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  K +   +P  G    +D  +       + ++R+ M +    RA   V+ L  + +
Sbjct: 361 ASMARKWFGDAVPQAGTAIATDHPLRQHAEAAIGQVRDAMPDMAFQRASEAVLQLAIQAN 420

Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y + + PW L K     D   + LY  +E  R + +LL   VP L+ +I + L
Sbjct: 421 GYLNERAPWSLMKQPGQEDAVGSDLYAVLECCRIVGLLLNPLVPDLSERILNQL 474


>gi|224438096|ref|ZP_03659035.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144540|ref|ZP_07806733.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129571|gb|EFR47188.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 655

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 192/518 (37%), Positives = 307/518 (59%), Gaps = 20/518 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K +I++ I Y N  PHIGHAY  I+ D+L +F  L G DVLF TGTDEHGQKI ++AQ
Sbjct: 2   QQKTFITSPIYYVNDIPHIGHAYTTILCDMLKKFRILQGEDVLFLTGTDEHGQKIEQSAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T + + D  S  F+++ +   + YD F+RTT+ +H  + +  ++ + +KGDIYKG 
Sbjct: 62  KHNQTPQAYADSVSVKFKELWNEFQLDYDIFVRTTDSKHCQSVQKAFEIMFEKGDIYKGS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++   ++ +         Q    Q ++EE YFF LS YQDKLL +Y+ +
Sbjct: 122 YEGNYCVSCESFFTQSQLGENLSCPDCGKQ---TQIVQEESYFFALSKYQDKLLEFYKQN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------YIMYVWIDALTN 237
           P  I P  R+NEV+ F+  GL DLS++R +F+WGI + ++P+      + +YVW+DAL +
Sbjct: 179 PNMIAPAFRQNEVVKFISEGLNDLSITRTSFEWGIPLLENPKRNDNKKHTIYVWLDALLS 238

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y++  GY+   D  K ++W   LH +GKDILRFHA+YW AFL+S +LPLPK +++HG+  
Sbjct: 239 YISPLGYMQ--DSHKMEYWENALHFVGKDILRFHAVYWIAFLMSLDLPLPKHIYAHGWWT 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKS+GNVIDP  V +  G+++LRYFL+RE+  G+DG + +  L +R+N++L N 
Sbjct: 297 KDGAKMSKSIGNVIDPKAVAQAYGIESLRYFLMREMPFGQDGDFSQKALIERINSELGND 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +GNL++R + M  K +   + +     F  ++   L+    ++   +E MQ     R + 
Sbjct: 357 VGNLLNRLLGMSEKYFSLQVDSKDVKKFYATE---LNELEHIINRTQEKMQTMQPQRYIE 413

Query: 416 QVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++ +  S  +      +PW L K    D+A  +L +   ++ + A+LL   +P+ A+KI 
Sbjct: 414 ELWAAFSLGNGVITKYEPWNLMKNAEQDKAMALLGLIANILAKAALLLYPIMPESAHKIA 473

Query: 475 DILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             L ++     F  L ++  L     L K   P+FPR 
Sbjct: 474 KALSLSISPDSFDRLIKQHALLDDLTLTK-IPPLFPRI 510


>gi|58697284|ref|ZP_00372656.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536361|gb|EAL59826.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 447

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 192/446 (43%), Positives = 267/446 (59%), Gaps = 44/446 (9%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           H      LW ++ ++G IY   YSGWYS+RDEA+Y + E+    DG+        VQW++
Sbjct: 1   HKKAVIALWNRLEERGQIYLDSYSGWYSVRDEAFYQESELI---DGKAPTGAE--VQWIK 55

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE YFFRLS +QDKLL  Y++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P
Sbjct: 56  EESYFFRLSNWQDKLLELYKNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVP 115

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA----------------------- 258
            + ++++YVWIDALTNYLT+ G+         +FW                         
Sbjct: 116 GNDKHVIYVWIDALTNYLTSIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPV 175

Query: 259 --------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                         ++HVIGKDILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKIS
Sbjct: 176 SSTGMTPNLADNSFNVHVIGKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKIS 235

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNVIDPI + +E GVD LRYFL+RE + G+DG + K  +  R+N++LAN IGNLV R
Sbjct: 236 KSLGNVIDPIGLAQEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQR 295

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S + K   G++PT        E  L  C  +L ++  ++     +  +  +I++ SE 
Sbjct: 296 TISFLHKQCSGIVPTIDQILLKGEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEA 355

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D   PW L KT+ +R + V+Y  +E IR + ILLQ  VPK A  I + L +  E R
Sbjct: 356 NAYIDKSAPWTLSKTDRERVNLVIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQR 415

Query: 485 CFQSL-DQRLKPGFMLHKTFDPIFPR 509
             +SL +  +  G  L K   P+F R
Sbjct: 416 DLKSLCNACVSLGITLPKP-TPVFLR 440


>gi|56417068|ref|YP_154142.1| methionyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56388300|gb|AAV86887.1| methionyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 455

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 184/455 (40%), Positives = 283/455 (62%), Gaps = 14/455 (3%)

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV    FVD+ S  FR++  V     +DFIRTTE+RH      LW+++     IY 
Sbjct: 2   ARARGVPVHQFVDEISGAFRNLVGVSGFRCNDFIRTTEERHKRAVLALWERLRGNNQIYL 61

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y+G+YS+RDE +Y + ++    DG+        V+W+EE GYFF+LS +Q+ LL +Y 
Sbjct: 62  GHYAGFYSVRDETFYQERDL---VDGKAPTGAE--VEWLEEPGYFFKLSEWQESLLKFYA 116

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +PEF++P  + NEVISFV+SGL+DLS+SR  K+  WGI++P D  +I+Y+W+DAL  YL
Sbjct: 117 DNPEFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCYL 176

Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              G+ +  +G   ++W +D     HV+GKDILRFHA+YWPA L++A+LPLPK++ +HG+
Sbjct: 177 ALLGFPET-EGEYKRYWGSDGAVSTHVVGKDILRFHAVYWPALLMAADLPLPKQIVAHGW 235

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            L++G+KISKS+GNVIDP  +IE+ G+D  RYFL+ E   G D  +    L +R+N DLA
Sbjct: 236 WLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDLA 295

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N  GNLV R+++++ ++  G IP      + +E+ ++  + ++Q + E M       AL 
Sbjct: 296 NNFGNLVQRTITLVHRECGGKIPEVEGMMQGEEAPINYEAVLVQYV-EYMAEYRFFEALK 354

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V++L S  + Y   + PW+L K +   A  V++  +E IR + I+LQ FVP  A+KI D
Sbjct: 355 FVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKILD 414

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + +  + R F+   +  + G  L  T  P+F + 
Sbjct: 415 QISLPADRRTFEHFSEFCRGGVSL-GTPTPVFGKL 448


>gi|37522592|ref|NP_925969.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|35213593|dbj|BAC90964.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 516

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 201/516 (38%), Positives = 293/516 (56%), Gaps = 21/516 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA PHIG AY  + AD +AR+HRL G  V F TGTDE+G KI + A    +T
Sbjct: 7   LTTPLFYVNALPHIGSAYPTLAADAVARYHRLRGRSVRFVTGTDEYGLKIERQAAERHLT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   ++ +  F  +   L I YD FIRTT+ RH    R  +++    GDIYKG Y+G Y
Sbjct: 67  PREHCNEIAAGFEKLWRALSIDYDRFIRTTDPRHAAIVREFFERCWQAGDIYKGRYTGLY 126

Query: 129 SLRDEAYYND-DEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            +  E +    DE Y   +G+     H  P++  +EE Y F LS YQ KL  Y++ HPEF
Sbjct: 127 CIDCEEFKKKPDEDYFIENGEPRCKIHLKPLREQDEENYIFALSRYQQKLEQYFDEHPEF 186

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYL 245
           + P  R +EV +F+  GL+D S+SR    WG+ IP D    +YVW +AL  Y+T      
Sbjct: 187 VQPDFRAHEVRNFIAGGLEDFSISRANVSWGLPIPVDSSQTIYVWFNALLGYVTALLEPE 246

Query: 246 DNP--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           D P  + + A++WP DLH++GKDILRFHA+YWPA L+SA LPLP  +F HGF+   G K+
Sbjct: 247 DEPTLENALARWWPIDLHIVGKDILRFHAVYWPAMLMSAGLPLPGMIFGHGFLTRDGRKM 306

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            K+LGNVIDP  ++E+ G DA+RY+ ++ I  G+D  +++   ++ +NADLAN +GNL++
Sbjct: 307 GKALGNVIDPGVLVEQYGSDAVRYYFLKAIEFGRDNDFNETRFREILNADLANDLGNLLN 366

Query: 364 RSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           R+ +M++K   G+IP+       A  +    +  VC+   + +R          A    +
Sbjct: 367 RTGNMVVKYCGGVIPSVAIDPTDALRDKATGLAQVCAEHWEALR-------FSEASGLAL 419

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LV   +RY DA+ PW L KK    +   VLY  +E +R  A+LL   +P LA +I+  L
Sbjct: 420 ALVRAGNRYLDARAPWSLYKKGEQVQVEQVLYAVLESVRIAAVLLSPLIPGLAAEIYRQL 479

Query: 478 ---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                A E+R +        PG        P+FPR 
Sbjct: 480 GFSVQAWEDRSWDDALWGGLPGGQPLCLGSPLFPRL 515


>gi|15233258|ref|NP_191100.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|7076783|emb|CAB75898.1| methionyl-tRNA synthetase (AtcpMetRS) [Arabidopsis thaliana]
          Length = 616

 Score =  359 bits (922), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 197/517 (38%), Positives = 291/517 (56%), Gaps = 14/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A
Sbjct: 67  EGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY+ 
Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L      
Sbjct: 187 DYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239
           +P F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y   L
Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISAL 303

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T      N + + +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+   
Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLTKD 363

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN IG
Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V+ 
Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483

Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + +  + Y D + PW L K    + + A+  L + +EV+R +A+ L    P L+ +I+  
Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRIYSQ 543

Query: 477 L-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509
           L +  D+       D +   LK G ++ +   P+F R
Sbjct: 544 LGYTEDQFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 579


>gi|320037850|gb|EFW19787.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 584

 Score =  359 bits (921), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 190/509 (37%), Positives = 280/509 (55%), Gaps = 26/509 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +R+  Y++T I Y NA PH+GH Y +++AD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 47  QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G+      DQN + F+D+A   ++ +D FIRTT+  H D  +  W+ +  +G IY 
Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y  + V+   D                V+W  E  Y FRLSA++D+
Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDR 226

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P FI P    + ++  V SGL DLS+SR  +   WGI++P D    +YVW+D
Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPA++HV+GKDILRFH +YWPAFL++ +LPLP++V SH
Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALDLPLPRQVLSH 346

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS GNV++P+  +   GVD LR++L  +     D  Y+   + +R    
Sbjct: 347 AHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKT 406

Query: 354 LANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           L  G+GNL SR V          I    +G  P P   +E+D     +   +    R  M
Sbjct: 407 LQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPP---SEADRKHQQLLEGIRDVTRSWM 463

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAIL 461
            +    +A   V+ ++ E ++YF   +PW + +    T P   S V+Y T E +R   IL
Sbjct: 464 DDLNPRKAAESVVGIIHETNKYFQEARPWSMAEQSGNTEPTELSRVIYNTAESLRIAGIL 523

Query: 462 LQAFVPKLANKIFDILFVAD--ENRCFQS 488
           LQ F+P+ + ++ D+L VA   E R F++
Sbjct: 524 LQPFMPEKSARLLDMLGVAGDPEKRSFEA 552


>gi|110004172|emb|CAK98510.1| probable methionyl-trna synthetase transmembrane protein
           [Spiroplasma citri]
          Length = 526

 Score =  359 bits (921), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 197/496 (39%), Positives = 292/496 (58%), Gaps = 12/496 (2%)

Query: 1   MKEREKL-YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + +KL Y++T I YP+AQ HIGHAY   +AD+L R+ ++ G +  F TG+DEHG+KI 
Sbjct: 1   MSQNKKLFYVTTPIYYPSAQLHIGHAYTTTLADILNRYKKMAGYETFFLTGSDEHGEKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K A+ AG+T   F+     NF+ + + L I Y  FIRTT+K H    + ++ K+ + GDI
Sbjct: 61  KKAKTAGITPYQFITMIVDNFKLLWNKLGIEYSKFIRTTDKEHEVGVQKIFSKLYNNGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y G Y +  E +  + ++ K  + Q     + P Q ++EE YFF++S Y   L++Y
Sbjct: 121 YLGEYEGLYCVSCEEFLTEAQIDKITN-QCLVCGNKP-QKVKEETYFFKVSKYSQFLINY 178

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y +HP FI P  R+NE++ +F+  GL DLS++R TF WGIK  ++ ++I+YVWIDAL+NY
Sbjct: 179 YNNHPGFIEPEARKNEMLNNFILPGLTDLSVTRTTFSWGIKTLENDKHIIYVWIDALSNY 238

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           LT  GYL N D    KFW       L ++GK+I RFH IYWP+ L S  L  P K+ SHG
Sbjct: 239 LTALGYLSNDDALFNKFWNNPDVEILQLLGKEIARFHTIYWPSMLESLGLRQPNKLLSHG 298

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS+GNV+DP+ +I++ G D LR++L  EI    DG +  +   +  NA L
Sbjct: 299 WILFKDTKMSKSIGNVVDPLYLIDKYGRDTLRFYLGYEIPTENDGKFSYEMFLESYNAHL 358

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N IGNLVSR  +MI K ++G +         D  ++  C + +Q  ++ M    I   L
Sbjct: 359 VNNIGNLVSRVSNMISKYFNGQLVKQQQL---DNVLIESCVQAVQNYQQAMDAYQISEGL 415

Query: 415 AQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + ++ L ++ ++Y +  KPWEL+K  N ++    L      I   A LLQ  +   A KI
Sbjct: 416 SMILELCNKANKYIEENKPWELEKNKNMEQLHETLASLAYTIIVSAFLLQPVLVDNAQKI 475

Query: 474 FDILFVADENRCFQSL 489
            D   V   N  F+++
Sbjct: 476 ADYFNVNLTNLTFKTI 491


>gi|308271750|emb|CBX28358.1| Methionyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 640

 Score =  358 bits (920), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 204/517 (39%), Positives = 304/517 (58%), Gaps = 21/517 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA+PH+GHAY  IIADV+ R++ + G D    TGTDEHG K+ +AA+ 
Sbjct: 3   DNFYITTPIYYVNAKPHLGHAYTTIIADVVCRYNTMLGKDAFLLTGTDEHGDKVVRAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  K + D+ SR FR++   L+I Y+ FIRTT+  H +  + + +KI D GDIY   Y
Sbjct: 63  ENLNPKEYADKISRLFRNLWPELNIKYNSFIRTTDPSHIEIVKQVLQKIYDSGDIYFSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    +G+  + +  P + ++E  YFF++S YQD L+ +   HP
Sbjct: 123 EGLYCFGCERFYTEREL---VNGKCPDHETEP-ETIKESNYFFKMSRYQDWLIDHIRRHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P   +NEV+SF+K  L+DL +SR KT  +WGI +P D +Y+ YVW DAL NY+T  
Sbjct: 179 DFIRPERYKNEVLSFLKDPLEDLCISRPKTRLEWGISLPFDDKYVTYVWFDALLNYVTAL 238

Query: 243 GYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY   PDG    K+WP   H++ KDIL+ H IYWP  L +A +PL K +  HG+      
Sbjct: 239 GY---PDGEFFKKYWPEAQHIVAKDILKPHGIYWPIILKAAGIPLFKHLNVHGYWNIDQS 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P+ +    G+DA RYFLVRE+  G D  ++++ L  R+N+DLAN IGNL
Sbjct: 296 KMSKSLGNVVEPLSLKNTYGLDAFRYFLVREMVFGLDSGFNEEALVSRINSDLANDIGNL 355

Query: 362 VSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            SR ++M+ K + G+IP   P    E    +    S  L E ++ M++   H+AL  V  
Sbjct: 356 FSRVITMVHKYFGGVIPEINPETEDEMQGGLKFDASAALSEYKKAMESFSFHKALMSVWE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++++++Y D   PWEL K   +R     V+Y  +E +R ++ L+   +P  A  +   L
Sbjct: 416 FINQMNKYVDTTAPWELAKKKSERKELEFVIYNLLEGLRIVSGLIYPVMPDTAKTMQQHL 475

Query: 478 FVADENRCFQSLDQR-----LKPGFMLHKTFDPIFPR 509
               E+  F  L+Q      LK G  + K+   +FPR
Sbjct: 476 GQNPES-IFYDLNQLKSWKVLKAGTSIPKSVT-LFPR 510


>gi|295111687|emb|CBL28437.1| methionyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 650

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 294/484 (60%), Gaps = 9/484 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y N  PHIGHAY  I  D ++R+ R+ G DV F TGTDEHGQK+  AA+  G
Sbjct: 9   FYITTPIYYVNDVPHIGHAYTTIACDAMSRYKRMKGCDVRFLTGTDEHGQKVQAAAEKRG 68

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  +  VD+   NF+++  VL++S DDFIRTTE RH    + ++K++ D+GDIYKG Y G
Sbjct: 69  VAPQDLVDRIHLNFKELWRVLNVSNDDFIRTTEPRHVRVVQDMFKRLMDQGDIYKGEYEG 128

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  EAY  +  +  G  G   +    P+  M+EE YFFR S Y  +L+ +YE H + 
Sbjct: 129 KYCVPCEAYVPESSM--GPGGTCPDCGR-PLTVMKEESYFFRGSRYVPQLIEHYEKHLKG 185

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           ++P  R NE++SF+K  ++D S+SR T  WGI +P D ++++YVW DAL NY +  GYLD
Sbjct: 186 VMPRIRYNEIMSFLKGEVRDQSVSRTTLKWGIPVPGDEKHVIYVWFDALINYASAIGYLD 245

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +   +  ++WP   HV+GKDI+RFH + WP  LL+  LPLP  + +HG+    GEK+SKS
Sbjct: 246 D-RSTFDRYWPHVRHVVGKDIIRFHCVIWPLMLLALGLPLPVSIVAHGWWTVDGEKMSKS 304

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP  V+EE G+D  RYFL+REI  G DG + +  L  R+N+DLAN +GNL++R++
Sbjct: 305 RGNVVDPCRVVEEYGLDPFRYFLLREIPFGHDGDFSEAALVGRINSDLANDLGNLLNRTL 364

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVC--SRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            MI    +G +P   +  E  E+    C     L+   E M++     AL ++ S +   
Sbjct: 365 KMIQDYREGTVPAE-SLREMPEARDLQCQAQAALEGTDEAMEDFSFDEALKRIWSFIGRA 423

Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADE 482
           +++ D   PW L K+ + D   +VL    E +R  A+++  F+P+ A +I+  L +  D 
Sbjct: 424 NKFIDETMPWRLAKEGSGDALDSVLLNLYEALRLSALMVAPFMPETAQRIWGQLGLEGDP 483

Query: 483 NRCF 486
            +C 
Sbjct: 484 LKCL 487


>gi|297622523|ref|YP_003703957.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297163703|gb|ADI13414.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 655

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 196/512 (38%), Positives = 287/512 (56%), Gaps = 13/512 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R   Y +T I Y NA+PHIGHAY   + DV+ RFHRL G D LF TGTDEHG+KI KA
Sbjct: 25  QTRGVYYATTPIFYVNAEPHIGHAYTTTLVDVVTRFHRLKGDDTLFLTGTDEHGEKIQKA 84

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG++ + + D+ ++ F+D  + L I+YD+FIRTTE RH      +  ++ + GDI  
Sbjct: 85  ADAAGLSPQAYTDRVAKKFQDTWNSLGIAYDEFIRTTEARHQAVVHEVLTRVYEAGDIIF 144

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
           G Y G Y +  E YY D E+  G        QH+ P+++  EE YFFR+  Y+  L    
Sbjct: 145 GEYGGLYCVGCERYYTDKELEGGK-----CPQHDIPLEYRSEENYFFRMERYRPWLRETL 199

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
           E +PE I P   RNEV+S ++  + DLS+SR      WGI +P D  ++ YVW DAL NY
Sbjct: 200 EENPELIRPERYRNEVLSILREPIGDLSISRPRSRVPWGIPLPWDENHVTYVWFDALINY 259

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            +     D    +  ++WP   H I KDIL+ H ++WP  L SA LPL + +  HG+ L 
Sbjct: 260 YSALKSRD----AVERYWPFVEHFIAKDILKPHGVFWPTMLKSAGLPLYRHLNVHGYWLV 315

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P+++ ++ G DA RY+L+R++  G D  + + GL +R+NADLAN +
Sbjct: 316 DGGKMSKSKGNVVRPLDLKDKYGNDAFRYYLLRDMTFGLDASFSEVGLAERINADLANDL 375

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R++ M+ K   G++P PG     DE++      + + + E        RA+  V+
Sbjct: 376 GNLLNRTLGMLGKYRGGVVPAPGPLEPIDEALRDAFVGLPERMTELFDALQFDRAIESVL 435

Query: 419 SLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V + ++Y    +PW L K     R  TVLY  VE +R  +ILL   +P  A ++   L
Sbjct: 436 EAVRKANKYIAETQPWVLAKEGAAGRLDTVLYGCVEALRCASILLSPVIPTKAAELQQQL 495

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +  +     +    L P         P+FPR
Sbjct: 496 GLKGDYTLQDAATWGLTPAGTPTAPGAPLFPR 527


>gi|68073399|ref|XP_678614.1| methionine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56499140|emb|CAH98022.1| methionine--tRNA ligase, putative [Plasmodium berghei]
          Length = 885

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 188/478 (39%), Positives = 290/478 (60%), Gaps = 12/478 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+TAI Y N +PH GHAYE+++AD LAR+HR  G DV FTTG DEHG KIA  A
Sbjct: 219 KNDNFYITTAINYVNGEPH-GHAYEIVLADTLARYHRNLGRDVFFTTGADEHGLKIANQA 277

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D N   F+ +   L  + D ++RTT   H    + +W K    GDIY G
Sbjct: 278 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVKNGDIYLG 337

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWY++R+E Y  ++E        Y +  +N  ++ M+E  YFFR+S YQD+LL +  
Sbjct: 338 EYEGWYNVREETYIPENE---AKLMNYIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQHIH 394

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P + RNE++  +K  L+DLS SR  F WGI +P+DP+++MYVW+DAL NY + 
Sbjct: 395 DNPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFSWGIPVPNDPKHVMYVWMDALINYYSN 454

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
             +++  D  K K+WPAD+H+IGKDI+ FHA+ +P  L+S N+ LPK +FSHGF+L   G
Sbjct: 455 C-FIN--DQEKIKYWPADIHIIGKDIVWFHAVIFPTILMSINIELPKCIFSHGFVLAGDG 511

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSL NVIDP E+IE  G DA R+ +V+E   G D  +D D L    N+DLA+ IGN
Sbjct: 512 KKMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNLVDMCNSDLADTIGN 571

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R++S+ +   +  IP    + + D          +  I   M+N  +H+   + +++
Sbjct: 572 LVQRTLSLCMLSNNAKIPP--LYDDIDIEFPLCMLHFINRIEYYMKNFHVHKFCEKTVNV 629

Query: 421 VSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +++++     PW+ K ++  ++   ++ + +E I  +A  +   +P +A++IF+ L
Sbjct: 630 CKDLNKFLTDLAPWKYKEESEKNKKLHIIRLMLESIYFIAHYIDIVIPMIASQIFNQL 687


>gi|94984831|ref|YP_604195.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555112|gb|ABF45026.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 670

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 201/490 (41%), Positives = 291/490 (59%), Gaps = 11/490 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+TAI Y N  PHIGH YE I+AD LAR+HRL G DV F TGTDEHG+KIAKAA  A
Sbjct: 11  EFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHGEKIAKAAAKA 70

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G T + FVD  S R F+ + D L+ISYDDFIRTTE RH      + +++ D GDIY   Y
Sbjct: 71  GQTPQTFVDDLSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVYDAGDIYFAEY 130

Query: 125 SGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            G YS+  E Y  + E+ +G DG + Y    +P +   E  YFFR+  YQD L ++ E +
Sbjct: 131 EGLYSVGAERYVTEKELVEGPDGVRRYPGDKDPPELRREANYFFRMEKYQDWLRAHIEQN 190

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           P+FI P   RNEV+  ++  + DLS+SR      WGI++P DP ++ YVW DAL NY++ 
Sbjct: 191 PDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLNYVSA 250

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-G 300
                  + +  K W    HVIGKDIL+ HA++WP  L +A LP+ +K+  H  IL + G
Sbjct: 251 PVSRGLGEETIGKAW----HVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSHILAEDG 306

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+ KSLGN IDP +++ E  VDA+RY L+RE     D  Y +  L  R+N+DLAN +GN
Sbjct: 307 RKMGKSLGNAIDPEQLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDLANDLGN 366

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K   G++P      E +  + +    +  E+   +++  ++ A+   ++ 
Sbjct: 367 LLSRTVSMIQKYRGGVLPQALEVGEREREVEAKALALPSEVMTLVRDLKVNMAIETAMNF 426

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V +++RY    +PW L K+     R  TVLY   E +R  ++ L+A +P  A ++   L 
Sbjct: 427 VRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARELRAQLG 486

Query: 479 VADENRCFQS 488
           +  ++   + 
Sbjct: 487 LGGQSYALRG 496


>gi|313679972|ref|YP_004057711.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152687|gb|ADR36538.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 626

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 191/469 (40%), Positives = 285/469 (60%), Gaps = 17/469 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y NA+PHIGHAY  I AD LAR+HRLDG D  F TGTDEHG+KIA+AA+
Sbjct: 2   KKTFYVTTPIYYVNARPHIGHAYTTINADFLARWHRLDGYDTFFLTGTDEHGEKIAQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   + FVD+ +  F+   +VL ISYDDFIRTTE RH    +   ++I D+GDIY G 
Sbjct: 62  RAGKPPQQFVDEVAEEFKKAWEVLHISYDDFIRTTEPRHKKVVQRYLQEIYDRGDIYYGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E +  + E+    DG+  +    P +   E  YFF++  Y+  L  + + H
Sbjct: 122 YEGLYCVGCERFLTEKEL---VDGKCPDHGVEP-EPRREGNYFFKMEKYRTWLRGHIQKH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           P F+ P   RNEV++ +   + DLS+SR      WGI++P DP ++ YVW DAL NY++ 
Sbjct: 178 PGFVRPERYRNEVLAILSEPIGDLSISRPKSRVSWGIELPWDPDHVTYVWFDALLNYISA 237

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY   PDG +  K+WPA  H+IGKDIL+ HA++WP  L + ++ + + +   G +L  G
Sbjct: 238 LGY---PDGERFQKYWPAAQHMIGKDILKTHAVFWPTMLKAGDVAVYRHLNVGGHLLADG 294

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNVIDP E   + G DA+RY+L++E   G DG   + GL +R NADLAN +GN
Sbjct: 295 RKMSKSLGNVIDPFEWARKYGPDAVRYYLLKETPYGLDGAVSEAGLVERYNADLANDLGN 354

Query: 361 LVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L+ R  +M+LK   G +    PGA   ++  ++     ++ ++R  +     ++AL +V+
Sbjct: 355 LLQRVRTMVLKYRQGRLRFQQPGA---AEHEVVEAAEALVPKVRGLVGELRFNQALEEVL 411

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             V  ++RY + + PW++   + +    VLY  VE +R  ++LL+  +P
Sbjct: 412 QFVRSLNRYINERAPWKI--ADAEELDRVLYTAVEGMRVASVLLEPAMP 458


>gi|88808698|ref|ZP_01124208.1| methionine--tRNA ligase [Synechococcus sp. WH 7805]
 gi|88787686|gb|EAR18843.1| methionine--tRNA ligase [Synechococcus sp. WH 7805]
          Length = 525

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 195/514 (37%), Positives = 284/514 (55%), Gaps = 22/514 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA+PH+G  Y  I  D LARF RL+G +V+F TG DEHGQKI + A+   ++
Sbjct: 16  LTTPLYYVNAKPHLGSVYTTIACDALARFQRLEGEEVVFITGVDEHGQKIQRTAEAQSIS 75

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                D+ S  + D+    DI+ D F+RTT  RH    +  +++    G I  G   GWY
Sbjct: 76  PADHCDRISALYADLWARWDITNDRFVRTTSPRHRPLVQAFFQRCEAAGHIRTGHQEGWY 135

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D    K  D   +     P++W +EE  FF LS +Q+++ S   + P+FI 
Sbjct: 136 CVDCEEFKDDLADAKNPDCAIHR---KPLEWRDEENLFFCLSQFQERIESLI-ADPQFIA 191

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR E+ +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT    LD  
Sbjct: 192 PSSRRREIENFVAGGLRDFSISRVNVSWGLPVPGHQGHTFYVWFDALLGYLT--ALLD-- 247

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG            WP D+HVIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+  +G+
Sbjct: 248 DGGPVDLDRLTDVGWPVDVHVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQ 307

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ K+LGNV+DP  ++E  G DA+R++L+R+I  G+DG + +      VN DLAN IGNL
Sbjct: 308 KMGKALGNVLDPETLLERCGTDAVRWYLLRDIQFGEDGDFQQQRFMDLVNNDLANTIGNL 367

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K +D  +P   A   SD  +     R +  +R+++       A   V+ L 
Sbjct: 368 LNRTASMSRKWFDASLPPVSAAVRSDHPLKDTTERTIDRVRQSIPAFAFKDAAEAVLQLA 427

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            E + Y + Q PW L K  P     V   LY  +E  R + +LLQ  VP L+++I   L 
Sbjct: 428 IEANGYLNEQAPWSLMK-QPGHEQKVGDDLYAVLECCRVIGLLLQPLVPGLSSRILAQLD 486

Query: 479 VADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +   + +       +L+PG  L K  +P+  R 
Sbjct: 487 QSPSEKGWTHALSWGQLEPGASLSKP-EPVMQRL 519


>gi|13605910|gb|AAK32940.1|AF367354_1 AT3g55400/T22E16_60 [Arabidopsis thaliana]
 gi|22137164|gb|AAM91427.1| AT3g55400/T22E16_60 [Arabidopsis thaliana]
          Length = 616

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 196/517 (37%), Positives = 290/517 (56%), Gaps = 14/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A
Sbjct: 67  EGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY+ 
Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E Y ++  +    +         P    +E+ YFF LS YQ  L      
Sbjct: 187 DYEGLYCVNCEEYKDEKGLL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239
           +P F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y   L
Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISAL 303

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T      N + + +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+   
Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLTKD 363

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN IG
Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V+ 
Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483

Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + +  + Y D + PW L K    + + A+  L + +EV+R +A+ L    P L+ +I+  
Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRIYSQ 543

Query: 477 L-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509
           L +  D+       D +   LK G ++ +   P+F R
Sbjct: 544 LGYTEDQFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 579


>gi|294899809|ref|XP_002776754.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239883955|gb|EER08570.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1046

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 297/494 (60%), Gaps = 22/494 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+TAI Y N   HIGHAYE + AD LAR++R+ G DV F TGTDEHGQKIA+ A++
Sbjct: 162 EKYYITTAINYTNGWAHIGHAYEAVAADALARWNRVYGRDVEFCTGTDEHGQKIAQKAES 221

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D  +  F+ +   L IS D +IRTT++ H  TC+ LW+ +S KGDIY   Y
Sbjct: 222 KGKTPQEICDIYASAFQALNQRLRISNDIYIRTTDEHHMKTCQKLWEIVSSKGDIYLDNY 281

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +G+Y +R+E Y  D E     +  Y + +   P+  M EE YFFR+  YQ +L+ + +SH
Sbjct: 282 TGYYLVREERYVTDAE---AKEWDYKDPSTGKPLTEMSEESYFFRMGRYQQRLVDHIKSH 338

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P + R ++++ ++  L+DLS SR+TF WGI IP    ++MYVW DALTNYL+   
Sbjct: 339 PDFIKPEQYRQQILARLEEPLRDLSCSRRTFSWGIPIPGSDDHVMYVWFDALTNYLSAVN 398

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
            LD+    K  +WPA+ H+IGKDI+ FH + WP  L+SA++PLP+ V  HGFI   +G+K
Sbjct: 399 GLDS---DKPHYWPANAHIIGKDIIWFHCVIWPCMLMSADIPLPESVAVHGFIQDAEGKK 455

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP +V+++  VD +R++++ +   G D  +    +    NADL NG+GNLV
Sbjct: 456 MSKSIGNVVDPHDVLDKFPVDTVRWYMLSDAPYGGDLKFSTAAMINTHNADLCNGLGNLV 515

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLV 421
           +R++++      G +P    F+  D        + + ++   M+ Q  I    A +  + 
Sbjct: 516 NRAIAL----SGGCVPE---FSVKDLEKPFDLRKTIDDLDATMRQQDAISEGCAIIRQVT 568

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480
              + +    +PW++K     R + ++ + +E +  LA L   F+P  A+KIF+ L  A 
Sbjct: 569 GATNEWITRVEPWKIKDDKEKRMA-IIRLLMESVYVLAHLWAPFIPMGADKIFEKLATAP 627

Query: 481 ----DENRCFQSLD 490
               D +  F++L+
Sbjct: 628 RPLKDLSETFENLE 641


>gi|156040341|ref|XP_001587157.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980]
 gi|154696243|gb|EDN95981.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 579

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 187/530 (35%), Positives = 294/530 (55%), Gaps = 27/530 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y NA PH+GH Y M++ADV  R+  L G   +  TGTDEHG KI +AA 
Sbjct: 46  KKPYYVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKGETAILCTGTDEHGMKIQRAAA 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   K F D  +  F+ +A    +S D F+RTT++ H +T   +W  + ++  IY+  
Sbjct: 106 QAGTLPKEFCDNGAETFKKLAQRAGLSNDHFVRTTDQDHKETVEYVWYMLKEREYIYESK 165

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNP---VQWMEEEGYFFRLSAYQDKLL 177
           + GWY + DE +Y +  + K  D   G+ + A       V+W  E+ Y FRLSA++D+LL
Sbjct: 166 HEGWYCVSDETFYPESVIEKRLDPFTGRTFIASQETGKEVEWTSEKNYHFRLSAFKDQLL 225

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +YE +P+F++P+ R  +V++ V  GL+DLS+SR +    WGI++PDD    +YVW+DAL
Sbjct: 226 EFYERNPDFVVPLTRMKDVVNQVSKGLEDLSISRPSDRLSWGIRVPDDDSQTIYVWLDAL 285

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T   Y   P    A  WPAD+ VIGKDI+RFH IYWPAFLL+ NL  PK++ +H  
Sbjct: 286 VNYITKASYPWAPGNEAAGGWPADVQVIGKDIVRFHCIYWPAFLLALNLQPPKRILTHAH 345

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                +K+SKS+GNV++P   ++  GVD +RY+L+ +    +D  Y  + + +R    L 
Sbjct: 346 WTMDNQKMSKSVGNVVNPFFAMDRFGVDVMRYYLIHDGGIKEDSSYGNEYIVERYKKGLQ 405

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDESILSVCSRVLQEIRENMQNQ 408
            G+GNLVSR     + +    +    A +E       S    +++ + V  +  + MQ  
Sbjct: 406 KGLGNLVSRLTRPKVWNVRSCV--EAAHSEGLHNSDISTNQQIALLNNVRPKANDKMQEL 463

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQA 464
               AL  ++  V E ++Y   + PW L K+    A     + +Y + E IR + ILLQ 
Sbjct: 464 NPAAALHVIMDTVFETNKYLQEEAPWSLAKSEEPNAKEKLISAVYHSAEAIRIVGILLQP 523

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGF------MLHKTFDPIFP 508
           ++P+ A+ + D++ V  E R ++       P +      +    +D +FP
Sbjct: 524 YMPEKASLLLDMIGVIPERRTYEYATLGADPSYGDAQVPLGKCAWDALFP 573


>gi|206889557|ref|YP_002248229.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741495|gb|ACI20552.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 642

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 206/525 (39%), Positives = 304/525 (57%), Gaps = 26/525 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  YI+T I Y N  PHIGHAY  I AD+LAR+ RL G  V F TGTDEHGQK+ +
Sbjct: 1   MNQNKGFYITTPIYYVNDIPHIGHAYTTIAADILARYMRLKGRKVFFLTGTDEHGQKVER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G T K   D    NF+ +   L+IS D FIRTT++ H    + + +++ DKG+I 
Sbjct: 61  AALQKGKTPKEHADIMVENFKTLWKGLNISNDAFIRTTDEEHKRIVQEILQRLYDKGEIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  YSG Y    E ++ + ++    +G+  +   + V+++EEE YFF +S YQ  L+ + 
Sbjct: 121 KRKYSGMYCTPCERFWTEKDL---VEGKCPDCGRD-VEFIEEENYFFLMSKYQQALIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVKS-GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
           E +P +ILP  R+NEV+ F+K+  L DL +SR     +WGI +P D  Y  YVW DAL N
Sbjct: 177 EKNPSYILPETRKNEVLGFLKNRTLGDLCISRPKHRLEWGIILPFDENYTTYVWFDALVN 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y +   YL  P+    ++WP D H+IGKDIL  HA+YW   L++  LPLP+ +F+HG+  
Sbjct: 237 YYSALKYLA-PEN--VEWWPPDHHLIGKDILTTHAVYWSTMLMALELPLPRNIFAHGWWT 293

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG+K+SKSLGNV++P EVI++ GVDA RYFL RE++ G DG + ++ L +R+N DLAN 
Sbjct: 294 VKGKKMSKSLGNVVNPSEVIKKYGVDAFRYFLFREVSFGLDGDFSEEALIRRINNDLAND 353

Query: 358 IGNLVSRSVSMILKDYDG------MIPTPGAFTE--SDESILSVCSRVLQEIRENM---- 405
            GNL++R + M  K   G      +IP   A     SD   LS    +++EI   +    
Sbjct: 354 FGNLLNRFLVMNEKYMKGAVKINSIIPRSEATRNLYSDNEFLSSFKSLIEEINNEILWDE 413

Query: 406 -QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            +  +I   + Q ISL    + Y    +PW++ K  P+R   +L+     IR + + L  
Sbjct: 414 FKFNIILEKIWQAISL---TNNYIAKTEPWKVLKEEPERLPLILFNIWNAIRIITVFLYP 470

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           F+P+ ANKI+  L + D    ++ L   L    +  +  + +FP+
Sbjct: 471 FMPETANKIWYALGLRDYIIDYKMLKWELDIKEVKTEKIEQLFPK 515


>gi|317484604|ref|ZP_07943508.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924144|gb|EFV45326.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 662

 Score =  355 bits (912), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 193/476 (40%), Positives = 283/476 (59%), Gaps = 13/476 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  I+AD L RFH L G D  F TGTDEHG KI KAA+ AG
Sbjct: 5   FYITTPIYYVNARPHLGHAYTTIVADSLRRFHTLLGEDTWFLTGTDEHGDKIVKAAEAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + FVD  S  F+ +   L I +D FIRTT+  H    +   +K+ D GDIY G + G
Sbjct: 65  QTPQEFVDGISGQFQALWPKLGIKHDQFIRTTDADHKARVQAFLQKVYDNGDIYFGEHGG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y + E+  G   Q+         +++E+ YFFR+S Y   L  +   +P+F
Sbjct: 125 HYCTGCERFYTEKELENGLCPQHLTKP----DFIQEKNYFFRMSKYLPWLAGHIRENPDF 180

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           I P   RNEV+S ++SG L+DL +SR     +WGI++P D  Y+ YVW DAL NY++  G
Sbjct: 181 IRPERYRNEVLSMIESGALEDLCISRPKNRLEWGIELPFDKDYVCYVWFDALLNYISALG 240

Query: 244 YLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +   PDG K A +WP + H++ KDIL+ H ++WP  L SA +PL K +  HG+ L K  K
Sbjct: 241 W---PDGDKYAAYWPGE-HLVAKDILKPHGVFWPTMLKSAGVPLYKHLNVHGYWLIKDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++PI++ E  G+DA RYFL+R++  G D  + ++ L  R NADLAN +GNL 
Sbjct: 297 MSKSLGNVVEPIKMAEHYGLDAFRYFLLRDMQFGSDASFSEEALITRFNADLANDLGNLF 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR +SM  K ++  +P  G   E D++++ +     +   +   N    + L  +  LV 
Sbjct: 357 SRVLSMNAKYFESKVPPMGELAEDDKALIELAENSRRNYVQLFGNIRFSQGLDALWDLVR 416

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +++Y D+Q PW L K+ +  R  TV+ + +E +R++A+ L   +P  A  + + L
Sbjct: 417 ALNKYVDSQAPWTLFKQGDTARLGTVIRLLLECMRKVALCLWPVMPGTAAALLEQL 472


>gi|226292612|gb|EEH48032.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 552

 Score =  355 bits (912), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 204/551 (37%), Positives = 304/551 (55%), Gaps = 52/551 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  YI+T I Y NA PH+GH Y MI+ DVL R+  L G  D    TGTDEHG KI +A
Sbjct: 9   DKKPFYITTPIFYVNAAPHVGHLYTMILGDVLKRWQILLGDTDAKLLTGTDEHGLKIQQA 68

Query: 62  AQNAGVTTKVFVDQNSRNFR-----------------DMADVLDISYDDFIRTTEKRHHD 104
           A  AG+  +   DQN + F+                 ++A  ++++YD FIRTT+ +H D
Sbjct: 69  AAVAGMAPQELCDQNCQTFKTPCEGTAARILWGDKFKNLARTVNVNYDHFIRTTDPQHKD 128

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQ 158
             R  W  ++ +G IY   + GWYS+ DEA+Y    V    D   G+   A       VQ
Sbjct: 129 AVRYFWDMLNHRGYIYTAKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQ 188

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           W  EE Y FRLSA+++ LL +Y +HP FI P    +++++ + +GL+DLS+SR     +W
Sbjct: 189 WTSEENYHFRLSAFKEPLLEHYRNHPNFITPKHYMDDMMNAISAGLQDLSISRPASRLNW 248

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           GI +P D   ++YVW+DAL NY+T  GY   PD      WPAD+ V+GKDILRFH IYWP
Sbjct: 249 GIPVPYDESQVIYVWLDALVNYITYAGYPFPPDAKS--IWPADVQVVGKDILRFHCIYWP 306

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           AFL++  LPLP+++ +H       EK+SKS GNV++P   IE  GVD +R+FLV + A  
Sbjct: 307 AFLMALGLPLPRQIMAHAHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQV 366

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDE 388
            D  Y+   + +R    L  G+GNL SR +        S ++   +G  P     TE  +
Sbjct: 367 SDSGYENSYIVERYKKGLQRGLGNLASRVLRGKKWIVRSSVVMAGEGRFPR----TEHQD 422

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            + S+  +     R+ M+     +AL  ++ ++ + ++YF   KPW L  +N    ++V+
Sbjct: 423 FLESIPEKA----RDEMRQLDPRKALNSIMEIIIQTNKYFHQMKPWILAMSNVVMLNSVI 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQS------LDQRLKPGFMLH 500
           Y T E +R   ILLQ F+P+ ++++ D+L V  A E R F +      LD  +    + H
Sbjct: 479 YSTAESLRIAGILLQPFMPQKSSELLDMLGVARAAEKRNFDAAKFGRDLDYGVPLVDLKH 538

Query: 501 KTFDPIFPRFL 511
            T   +FP  +
Sbjct: 539 GTTGTLFPPLI 549


>gi|87124495|ref|ZP_01080344.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168067|gb|EAQ69325.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 514

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 184/478 (38%), Positives = 271/478 (56%), Gaps = 17/478 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  I  D LARF RL+G  VLF TG DEHGQKI + A   G+ 
Sbjct: 5   LTTPLYYVNDRPHLGSTYTTIACDALARFQRLEGETVLFVTGVDEHGQKIQRTAAEQGIE 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  + +      IS D F+RTTE RH    +  +++    GDI  G  +GWY
Sbjct: 65  PREHCDRITARYLEAWRQWGISNDRFVRTTEPRHRPLVQAFFQRCEAAGDIRSGRQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + ++    K      +     P++W +EE  FF LS +Q+++ +   + P FI 
Sbjct: 125 CVGCEEFKDEPAEAKEPCCPLH---QKPLEWRDEENLFFCLSHFQERIETLI-NQPGFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR E+ +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT    LD  
Sbjct: 181 PASRRKEIQNFVAGGLRDFSISRVNVAWGLPVPGHEGHTFYVWFDALLGYLTA--LLD-- 236

Query: 249 DGS-------KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG         A  WPAD+ VIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+  +G+
Sbjct: 237 DGGDVDLNRLGAAGWPADVQVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQ 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL
Sbjct: 297 KMGKSLGNVLDPEVLLERCGADAVRWYLLRDIQFGDDGDFQQQRFTDLVNNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K ++  +P   +   +  ++ +   + ++ +R+ M      +A   ++SL 
Sbjct: 357 LNRTASMARKWFNDAVPPIDSTASAGHALQADAEQTIERVRQAMPELHFQQACEAILSLA 416

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + + Y +AQ PW   K   + AS    LY  +E  R + +LLQ  VP L+ +I D L
Sbjct: 417 IQANGYLNAQAPWRQMKQPGNEASVASDLYAVLECCRLVGLLLQPLVPDLSQRILDQL 474


>gi|148239464|ref|YP_001224851.1| methionyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147848003|emb|CAK23554.1| Methionyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 514

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 192/513 (37%), Positives = 288/513 (56%), Gaps = 20/513 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA+PH+G  Y  +  D LARF RL+G DV+F TG DEHGQKI + A+   ++
Sbjct: 5   LTTPLYYVNAKPHLGSVYTTLACDALARFQRLEGQDVVFITGVDEHGQKIQRTAETQNIS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                D+ S  + D+     IS D F+RTT  RH    +  +++    G I  G   GWY
Sbjct: 65  PIDHCDRISALYSDLWTRWHISNDRFVRTTSPRHLPLVQAFFQRCEAAGHIRTGHQEGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D    K  D   +     P++W +EE  FF LS +Q+++ +   + P+FI 
Sbjct: 125 CVDCEEFKDDPADAKAPDCPIHR---KPLEWRDEENLFFCLSQFQERIETLI-ADPQFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR E+ +FV  GL+D S+SR    WG+ +P  P +  YVW DAL  YLT    LD  
Sbjct: 181 PASRRREIENFVAGGLRDFSISRVNVSWGLPVPGHPGHTFYVWFDALLGYLT--ALLD-- 236

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG            WPAD+HVIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+  +G+
Sbjct: 237 DGGAVDLDRLADIGWPADVHVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQ 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ K+LGNV+DP  ++E  G DA+R++L+R+I  G+DG + +      VN DLAN IGNL
Sbjct: 297 KMGKALGNVLDPEILLERCGTDAVRWYLLRDIQFGEDGDFQQQRFMDLVNNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K ++  +P       S+  +     + ++ +R+++       A   V+ L 
Sbjct: 357 LNRTASMSRKWFEASLPPVSPDVRSEHPLKQPTEQTIERVRQSIPALAFQDAAEAVLQLA 416

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-F 478
            E + Y + Q PW L K   + ++    LY  +E  R + +LLQ  VP L+++I   L  
Sbjct: 417 IEANGYLNEQAPWSLMKQPGHEEKVGDDLYAVLECCRVIGLLLQPLVPGLSSRILAQLDQ 476

Query: 479 VADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              ++   Q+L   +L+PG  L K  +P+  R 
Sbjct: 477 RPSDDGWTQALRWGQLEPGVGLPKP-EPVMQRL 508


>gi|330718103|ref|ZP_08312703.1| methionyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 625

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 189/475 (39%), Positives = 287/475 (60%), Gaps = 15/475 (3%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           TGTDEHG KI + AQ AG +   ++D  ++  +++  ++DISYD FIRTTE +H    + 
Sbjct: 2   TGTDEHGLKIQQKAQAAGQSEIQYLDGMAKQIKELWSLMDISYDQFIRTTEPQHEAAVQN 61

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEE 162
           ++K++ D+GDIYKG Y GWYS+ DE Y+ +    EVY   +G+    +    + V+ ++E
Sbjct: 62  IFKQLLDQGDIYKGEYEGWYSVSDEEYFTESQLAEVYHDDNGKVIGGKAPSGHEVELVKE 121

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIP 221
           E YFF++S Y D LL YY+ HP FI P  R NE+IS F+  GL+DL+++R +FDWG+K+P
Sbjct: 122 EAYFFKMSKYADWLLDYYKLHPNFIQPEARMNEMISNFIAPGLEDLAMTRTSFDWGVKVP 181

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            D ++++YVWIDAL NY+T  GY    D    ++WPA+  ++GK+I+RFH IYWP  L +
Sbjct: 182 GDEKHVIYVWIDALANYITALGYGSADDTLFQRYWPANAQLVGKEIVRFHTIYWPIILHA 241

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGF 340
             LPLPK V  HG+++ K  K+SKS GNVI P EV+E+  G+DA+RY+L+R +  G DG 
Sbjct: 242 LGLPLPKSVIGHGWLVMKDGKMSKSKGNVIYP-EVLEQRYGLDAVRYYLLRAMPFGNDGV 300

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQ 399
           +  +    RVN DLAN +GNL++R+++MI K  +G+IP       S DE ++ + +  + 
Sbjct: 301 FTPEDFVSRVNFDLANDLGNLLNRTIAMINKYEEGIIPKLATGKTSFDEDLIRIINESMV 360

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQ 457
              ++        AL  + +++   ++Y D  +PW L K     D  S+V+      +R 
Sbjct: 361 TYHQHFNKLRTADALESIWTIIRRANKYIDETQPWVLAKDEARADELSSVMAHLAASLRV 420

Query: 458 LAILLQAFVPKLANKIFDIL---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            A+LLQ  + +   KIF+ L   +  +  R        L  G  + K   PIFPR
Sbjct: 421 TAVLLQPVLTQAPAKIFEQLGLDYPKEGVRIANLSFGGLPTGGKVVKKGQPIFPR 475


>gi|297820298|ref|XP_002878032.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323870|gb|EFH54291.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 615

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/511 (37%), Positives = 289/511 (56%), Gaps = 14/511 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A   G  
Sbjct: 72  LTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAANGRN 131

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY+  Y G Y
Sbjct: 132 PPEHCDIISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYEGLY 191

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y ++ E+    +         P    +E+ YFF LS YQ  L      +P F+ 
Sbjct: 192 CVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFVQ 248

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---LTTTGYL 245
           P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y   LT     
Sbjct: 249 PSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTEDNKQ 308

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N + + +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+   G K+ K
Sbjct: 309 QNLETAVSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTKDGMKMGK 368

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN IGNL++R+
Sbjct: 369 SLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIGNLLNRT 428

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           + ++ K+ +  +            +     +++++ + N +N  +  A   V+ + +  +
Sbjct: 429 LGLLKKNCESTLVEDSTVAAEGVPLKDTVEKLVEKAQTNYENLSLSSACEAVLEIGNAGN 488

Query: 426 RYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVAD 481
            Y D + PW L K    + + A+  L + +EV+R +A+ L    P L+ +I+  L +  D
Sbjct: 489 TYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPIAPCLSLRIYSQLGYSVD 548

Query: 482 ENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509
           +       D +   LK G ++ +   P+F R
Sbjct: 549 QFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 578


>gi|322378728|ref|ZP_08053158.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380011|ref|ZP_08054276.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147563|gb|EFX42198.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148846|gb|EFX43316.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 632

 Score =  353 bits (907), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 189/511 (36%), Positives = 292/511 (57%), Gaps = 29/511 (5%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           IST I Y N +PH+GHAY   IAD+L +++ L G +V   TGTDEHGQKIA++A    ++
Sbjct: 23  ISTPIYYVNDKPHLGHAYTTFIADMLKKYYSLQGEEVFLLTGTDEHGQKIAQSALKHNLS 82

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              +    SR F++  D   I Y+ F+RTT+ +H +  +  ++K+  KGDIYKG Y G Y
Sbjct: 83  PLEYASNVSRLFKNQWDYFKIDYNHFVRTTDSQHKEAVQKAFEKMYQKGDIYKGMYQGSY 142

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESH 183
            +  E++                  H P        +EEE YFF+LS YQD+LL +Y +H
Sbjct: 143 CVSCESFVT--------------TTHCPDCNRESTLVEEESYFFKLSNYQDRLLDFYHTH 188

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLT 240
           P+ I P+ RRNEV+ F++ GL DLS++R +F+WGI +P    + ++++YVW+DAL NY++
Sbjct: 189 PKAIYPLFRRNEVLRFIEQGLYDLSITRTSFEWGIALPSSLKESKHVVYVWLDALLNYVS 248

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY     G+  + +   +HV+GKDILRFHAIYW AFL+S  LPL +++  HG+    G
Sbjct: 249 ALGY---GKGANLECFKHTIHVVGKDILRFHAIYWVAFLMSLELPLFERLCVHGWWTIDG 305

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+D  ++ +  G + LRYFL+RE+  G+DG +    L +R NADL+N +GN
Sbjct: 306 VKMSKSLGNVLDAQDLAKTYGTETLRYFLLREVPLGQDGDFSLQALIRRSNADLSNTLGN 365

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R + M  + + G + + G  T     +      +L  + ++MQ    HR L  +  +
Sbjct: 366 LVQRVLGMASQYFGGKLESEGVLTHY-AFLYQQLQDLLNSLDQSMQEMQPHRYLEDLWKI 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               +     ++PW + KT P +   +L +   ++ +    L   +P+ A K+  I  V 
Sbjct: 425 FEVCNATIAQEQPWNMVKTQPKKTMALLSLIATILAKSTFYLYPVMPESATKLAAIFGVN 484

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             ++ F +  Q   L P   LHK  + +FP+
Sbjct: 485 LNSQNFLTFKQSHYLLPPLTLHK-IEALFPK 514


>gi|301112046|ref|XP_002905102.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262095432|gb|EEY53484.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 463

 Score =  353 bits (907), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 178/441 (40%), Positives = 275/441 (62%), Gaps = 20/441 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++T I Y NA PHIGH +  ++AD L+R+H++ G DVLFTTGTDEHG K+ +AA+ +
Sbjct: 30  QTFVTTPIFYVNASPHIGHVHSAVLADALSRWHKVKGSDVLFTTGTDEHGLKVQEAAEKS 89

Query: 66  GVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G T  K F D+ S  F ++  V ++ Y  FIRT+++ HH+     W+ I D G IY G +
Sbjct: 90  GTTDYKAFCDEVSSRFNEIFQVANVDYSRFIRTSDEDHHEAVNAFWRTIRDNGYIYLGDH 149

Query: 125 SGWYSLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
             WY   DE++  + +V    D      +      +PV+ + EE Y FRLSA+QD+LL +
Sbjct: 150 ESWYCKSDESFLTEMQVEDKEDAHGNVVKVSKESGHPVEMLREENYKFRLSAFQDRLLEW 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
            +++P+ I+P  R NEV + V  GL+DLS+SR  +   W I +PDD ++ +YVW+DALTN
Sbjct: 210 LDANPDVIVPKSRYNEVRAAVAGGLRDLSVSRLSEKIKWAIPVPDDDKHCVYVWLDALTN 269

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT+ GY     G+    WPA  H++GKDIL+FHAIYWPAFL++A LPLPK+V +H    
Sbjct: 270 YLTSAGY----PGAIDHAWPAAYHIVGKDILKFHAIYWPAFLMAAGLPLPKRVVAHAHWT 325

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSLGNV+DP E++ + G D +R+FL+RE     DG ++ + L+ R N++LA+ 
Sbjct: 326 VGNVKMSKSLGNVVDPHELLSKYGSDFVRFFLLREGVLTNDGDFNAEALEDRANSELADT 385

Query: 358 IGNLVSRSV--SMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHR 412
            GNLVSR    ++++K   G++P    F   T  D+++++    +  ++ +        R
Sbjct: 386 FGNLVSRCTGKAVLVK---GIVPKRPEFDRLTAEDKTLVAKGQALADKVEQLFDTPDFAR 442

Query: 413 ALAQVISLVSEVDRYFDAQKP 433
            L +++  + +V+RYF   +P
Sbjct: 443 GLKEIVFFLHDVNRYFTIMEP 463


>gi|317969852|ref|ZP_07971242.1| methionyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 522

 Score =  353 bits (907), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 186/486 (38%), Positives = 272/486 (55%), Gaps = 11/486 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G AY  +  D LARF RL G +VLF TG DEHGQKI + A+ AG+T
Sbjct: 5   LTTPLYYVNDKPHLGSAYTTLACDALARFQRLKGEEVLFITGCDEHGQKIQRTAEAAGLT 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D  S  +R++ D   IS +  IRTT+ RH    +  + ++   GDI +G   GWY
Sbjct: 65  PQAHCDGVSAQYRELWDRWQISNNRLIRTTDPRHRQVVQQFFARVEASGDIVEGRQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D    +  +   +     P++W +E   FFRLS YQ+++ +   S P FI 
Sbjct: 125 CVACEEFKDDPHEAQDPECPIH---RKPLEWRDELNLFFRLSRYQEQIEALI-SQPGFIQ 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYL 245
           P+ RR EV +FVK GL+D S+SR    WGI +P    +  YVW DAL  Y+T     G  
Sbjct: 181 PVSRRREVENFVKQGLRDFSISRINLPWGIPVPGHEGHTFYVWFDALLGYITALLEEGDA 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D + ++ WPA +HVIGKDILRFHA+YWPA LLSA L LP KVF HGF+  +G+K+ K
Sbjct: 241 ADLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSAGLSLPAKVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP +++E  G DA+R++L+R+I  G+DG + +      VN DLAN IGNL++R+
Sbjct: 301 SLGNVLDPADLLERCGRDAVRWYLLRDIPFGEDGDFQQQRFSDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  + +D  +P       S   +    ++        ++N     A    + L    +
Sbjct: 361 SSMARRWFDEAVPPADQARTSTHPLAQAAAQAKDASLAALENLEFRSAAEAALQLAISAN 420

Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDILF--VAD 481
            Y + Q PW L K    R      LY  +E  R +A+L+   +P L+ ++   L   + D
Sbjct: 421 GYLNDQAPWSLMKKEGTREQVANDLYAVLEAARLVALLMAPLLPDLSGRMLHQLGQPIPD 480

Query: 482 ENRCFQ 487
            N   Q
Sbjct: 481 SNATAQ 486


>gi|237756467|ref|ZP_04585002.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691368|gb|EEP60441.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 559

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 188/441 (42%), Positives = 272/441 (61%), Gaps = 13/441 (2%)

Query: 72  FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
             D+    F+++   L+ISYD FIRTT+  H    + +++K  + GDIY   Y  +Y + 
Sbjct: 1   LADKTHLAFKELWRKLNISYDRFIRTTDPDHIKAVQYIFQKCYENGDIYLSEYESYYCVG 60

Query: 132 DEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            E +  + E+    D  Y    H  P + ++EE YFFRLS Y DKLL +YE +PEFI P 
Sbjct: 61  CEEFKTETEI---KDYDYKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEKNPEFIQPD 117

Query: 191 ERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
            R+NEV+SFVK GLKDLS+SRK     WGI +P DP + +YVW DALTNYLT  GY +N 
Sbjct: 118 FRKNEVVSFVKQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLTAVGYPENL 177

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           +    +FWPAD+H++GKDILRFHA+YWPAFL+SA L +PKKVF+HG+   +G K+SKSLG
Sbjct: 178 N----EFWPADVHIVGKDILRFHAVYWPAFLMSAGLEIPKKVFAHGWWTVEGHKMSKSLG 233

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV+DP +  +E GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GNL+SRS++M
Sbjct: 234 NVVDPFKAADEFGVDQLRYFLLREVPFGLDGDFSKSAVINRINSDLANDLGNLISRSLTM 293

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           I K  +G I  P  F E +E   +V S+ L+  +  +Q     ++L +V   +  +++Y 
Sbjct: 294 IHKFQNGKIERPSIFKEIEEEYKNVYSKTLENYKNFIQRLEFSKSLEEVWQFIDWLNKYI 353

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              +PW+L K + +   T LY  V+ I  +  +L  F+P+   K+ + L + + N   + 
Sbjct: 354 VKVEPWKLNKEDKEYLKTTLYTLVDGIYTVVWMLNPFMPQ---KMAEALNMLNINEIKKD 410

Query: 489 LDQRLKPGFMLHKTFDPIFPR 509
           +     P  +      P+FPR
Sbjct: 411 IKPYSFPAEIAINQVVPLFPR 431


>gi|320334699|ref|YP_004171410.1| methionyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755988|gb|ADV67745.1| Methionyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 657

 Score =  353 bits (906), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 197/479 (41%), Positives = 278/479 (58%), Gaps = 15/479 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER++ +I+TAI Y N  PHIGH +E I+ D +AR+HRL G DV F TGTDEHG+KIAK
Sbjct: 1   MSERKEFFITTAIDYANGAPHIGHVFEKILTDAIARYHRLAGYDVTFLTGTDEHGEKIAK 60

Query: 61  AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA  AG T + FVD  S   F+ + D L I YDDFIRTTE RH    + + +++ D GDI
Sbjct: 61  AAAKAGQTPQRFVDDLSLGAFKGLWDRLGIGYDDFIRTTEPRHKAYVQDVLQRVYDAGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y   Y G YS+  E Y  + E+  G           P +   E  YFFR+  YQ  L+ +
Sbjct: 121 YYAEYEGLYSVGAERYVTEKELVNGV----LPGDSAPPEVRREANYFFRMEKYQAWLVQH 176

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
            + HPEFI P   RNEV+  ++  + DLS+SR      WGI++P DP ++ YVW DAL N
Sbjct: 177 LQEHPEFIQPSGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLN 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y +           KA  +    HVIGKDIL+ HA++WP  L +A   L +++  H  IL
Sbjct: 237 YQSAPA-----SKGKAALFRHAWHVIGKDILKPHAVFWPTMLKAAGSDLYERLIVHAHIL 291

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            + G K+ KSLGN IDP  +++  G D +RY L+RE   G D  Y +  L  R+N+DLAN
Sbjct: 292 AEDGRKMGKSLGNAIDPGALVDAYGADTVRYTLLRETTLGADSPYGEGILVSRLNSDLAN 351

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+VSM+ K  +G++P PG   E +  I +    + + +   +++  I+ AL  
Sbjct: 352 DLGNLLSRTVSMVQKYREGVVPAPGPRAEREAGIEASARALPERVLGLVRDLKINMALEA 411

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               V +++RY     PW L K     +R +TVLY  VE +R  ++LL+A +P  A ++
Sbjct: 412 AFEFVRDLNRYIAESAPWALAKDPAQAERLNTVLYTAVEGLRVASVLLEAAIPTKAREL 470


>gi|148985860|ref|ZP_01818954.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147922006|gb|EDK73130.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
          Length = 626

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 185/481 (38%), Positives = 290/481 (60%), Gaps = 13/481 (2%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G DV + TG DEHGQKI + A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  
Sbjct: 2   GYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDY 61

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHN 155
           H      +++++  + DIY G YSGWYS+ DE ++ +    EV++   G          +
Sbjct: 62  HEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGH 121

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214
            V+W+ EE YF RLS YQD+L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF
Sbjct: 122 EVEWVSEESYFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTF 181

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAI 273
            WG+ +P +P++++YVWIDAL NY T  GY  +  G+  KFW   + H++GKDILRFH+I
Sbjct: 182 TWGVPVPSNPKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSI 241

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           YWP  L+  ++ LP ++ +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +
Sbjct: 242 YWPILLMMLDVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNL 301

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
             G DG +  +    R+N +LAN +GNL++R+VSMI K +DG IP      TE D  +  
Sbjct: 302 PVGSDGTFTPEDYVGRINYELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAE 361

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYV 450
           V  + + +   +M+     RAL  V +L+S  ++Y D   PW L K     D+ ++V+  
Sbjct: 362 VAEKSIADFHTHMEAVDYPRALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSH 421

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509
               IR +A L++ F+ + +  +   L + +E    ++L     P    +     PIFPR
Sbjct: 422 LAASIRVVAHLIEPFMMETSRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPR 480

Query: 510 F 510
            
Sbjct: 481 L 481


>gi|291295734|ref|YP_003507132.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470693|gb|ADD28112.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 628

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 197/482 (40%), Positives = 279/482 (57%), Gaps = 19/482 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y + AI Y NA PHIGH YE II D LARFHRLDG +  F TGTDEHG+KIA+AA+NAG
Sbjct: 5   FYETAAIDYANAAPHIGHVYEKIICDFLARFHRLDGYETNFVTGTDEHGEKIARAAKNAG 64

Query: 67  VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              + FVD  S   F+     L ISYDD+IRTT +RH    + + +K+ + GDIY   Y 
Sbjct: 65  QEPQAFVDYVSEQLFQPAYRRLLISYDDYIRTTSERHKRYVQEILRKVYEAGDIYYAEYE 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G YS+  E +  + E+  G           P    +E  YFFR+  Y+  L+ Y   HP+
Sbjct: 125 GLYSVGSERFVTEKELVNGV----LPGDSEPPILRKEANYFFRMEKYRPWLIEYLSEHPD 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            I P   RNEV+  +K  + DLS+SR      WGI IP D  ++ YVW DAL  Y ++  
Sbjct: 181 LIQPQAYRNEVLEMLKEPIGDLSISRPKDRVPWGIPIPWDENHVTYVWFDALLAYASSLA 240

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
                 G   KFWP   HVIGKDIL+ HAI+WP  L SA LP+ K++  HG IL   G K
Sbjct: 241 S----RGLFEKFWPHAWHVIGKDILKPHAIFWPTMLKSAGLPIYKRLVVHGHILAMDGRK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN +DP+ ++++ GVDAL Y L+R+   G D  + ++ + +R+N+DLAN +GNL+
Sbjct: 297 MGKSLGNAVDPLALLDKYGVDALHYALLRDTTLGSDSPFGEEVVAQRLNSDLANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR  +M+LK   G+IP P   +  D  +      +  ++R+ +    IH AL +V+  V 
Sbjct: 357 SRVRTMLLKYCGGIIPAP---SSPDSEVARAGVALAGKVRKEVDALRIHLALEEVLQYVR 413

Query: 423 EVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++++ +  KPWEL + +P R   +   LY  VE +R  ++LL+  +P  A ++   L +
Sbjct: 414 GLNKFINDVKPWELAR-DPGRQKELEDALYTAVEGLRIASVLLEPALPTKAKELRAALGL 472

Query: 480 AD 481
            D
Sbjct: 473 GD 474


>gi|111657212|ref|ZP_01407985.1| hypothetical protein SpneT_02001579 [Streptococcus pneumoniae
           TIGR4]
          Length = 626

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 185/481 (38%), Positives = 290/481 (60%), Gaps = 13/481 (2%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G DV + TG DEHGQKI + A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  
Sbjct: 2   GYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDY 61

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNA---QHN 155
           H      +++++  + DIY G YSGWYS+ DE ++ +    EV++   G          +
Sbjct: 62  HEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGH 121

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214
            V+W+ EE YF RLS YQD+L+ ++++HPEFI P  R NE++ +F++ GL+DL++SR TF
Sbjct: 122 EVEWVSEESYFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTF 181

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAI 273
            WG+ +P +P++++YVWIDAL NY T  GY  +  G+  KFW   + H++GKDILRFH+I
Sbjct: 182 TWGVPVPSNPKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSI 241

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           YWP  L+  ++ LP ++ +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +
Sbjct: 242 YWPILLMMLDVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNL 301

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
             G DG +  +    R+N +LAN +GNL++R+VSMI K +DG IP      TE D  +  
Sbjct: 302 PVGSDGTFTPEDYVGRINYELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAE 361

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYV 450
           V  + + +   +M+     RAL  V +L+S  ++Y D   PW L K     D+ ++V+  
Sbjct: 362 VAEQSIADFHTHMEAVDYPRALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSH 421

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPR 509
               IR +A L++ F+ + +  +   L + +E    ++L     P    +     PIFPR
Sbjct: 422 LAASIRVVAHLIEPFMMETSRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPR 480

Query: 510 F 510
            
Sbjct: 481 L 481


>gi|66808845|ref|XP_638145.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996820|sp|Q54MZ8|SYMM_DICDI RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|60466665|gb|EAL64717.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 575

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 187/525 (35%), Positives = 291/525 (55%), Gaps = 32/525 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++K+ I+T I Y N  PHIGH Y  ++ D L R++R  G D LF TGTDEHG K+ +A
Sbjct: 40  EDKKKVLITTPIFYVNGPPHIGHLYSALLGDALGRWNRFIGNDTLFMTGTDEHGSKVDEA 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+ T  + D+ S  FR++ D  DI YDDFIRTTE RH +    +W ++ ++G IYK
Sbjct: 100 AKKNGLKTIDYCDKISNRFRELFDKADIKYDDFIRTTEPRHKEAVTAIWNRLLERGYIYK 159

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--------------VQWMEEEGYFF 167
           G Y GWY   DE++  DD+V +G          NP              V W+EEE Y F
Sbjct: 160 GVYKGWYCTSDESFLTDDQVTEGMSPI---TPQNPISKKCMISLESGHEVNWIEEENYMF 216

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225
           +LS +   + +++E   + I P    N +   +  G+KDLS+SR +    WGI++P+DP 
Sbjct: 217 KLSEFSKTIENWFE-EVKPIFPAIHVNLLRYMLSQGIKDLSISRPSSRIPWGIEVPNDPS 275

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
             +YVW+DALTNYLT TGY +    S    W    H+IGKDI++FH++YWP+FL++A+ P
Sbjct: 276 QTIYVWLDALTNYLTVTGYPNVSPNSSQSHWSNATHIIGKDIIKFHSVYWPSFLIAADYP 335

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LPK +  H       EK+SKS GNV+DP   I+  G++ +RYFL++      DG + +  
Sbjct: 336 LPKSIICHAHWTVNREKMSKSRGNVVDPFLAIDNHGLELIRYFLLKGGGLENDGDWSEHE 395

Query: 346 LKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           L  R  +DLA+  GNL+SR     L    ++   +     FT  D+ ++   S +++ + 
Sbjct: 396 LAVRFKSDLADTYGNLISRCTGKALNPSGEWPKSVTDTSLFTMDDQKLIENSSILVKSVS 455

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL----KKTNPD--RASTVLYVTVEVIR 456
            +         + ++++ + E + Y   Q PW+L     +   D  R +T++Y+ +E+IR
Sbjct: 456 THYDRGDFKSGIFEIMTFLYECNLYVQNQAPWKLVPKPNRVGSDLIRLNTIIYIAIEMIR 515

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
             ++LL   +P  +N   + L +  ENR   S     K G+  H+
Sbjct: 516 ITSLLLSPIIPTSSNLTLNYLSIPLENRSNPS---NFKFGYNYHQ 557


>gi|317177788|dbj|BAJ55577.1| methionyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 647

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 292/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+N D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNNLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E GV+ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGVEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKST-KITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSATKL 472


>gi|239905442|ref|YP_002952181.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239795306|dbj|BAH74295.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 651

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 192/476 (40%), Positives = 278/476 (58%), Gaps = 10/476 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+T I Y NA+PH+GHAY  I+AD LARFHRL G DV F TGTDEHG KIA+AA  A
Sbjct: 3   RFFITTPIYYVNAKPHLGHAYTTIVADALARFHRLCGEDVFFLTGTDEHGDKIAEAAAKA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K + D  S  F  +   L I+   FIRTT+  H D  R   + + DKGDIY G Y 
Sbjct: 63  GQTPKEYADAISGLFSSLWPDLGITPTRFIRTTDTDHIDAVRRALQLVYDKGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG   + +  P  ++ E+ YFFR+S YQ +LL + +++P+
Sbjct: 123 GHYCTGCERFLTEKEL---VDGLCPDHKVKP-DYIAEKNYFFRMSKYQGQLLEHIKANPD 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P + RNEV+S ++SG L DL +SR      WG+++P D  ++ YVW DAL NYLT  
Sbjct: 179 FIRPRQYRNEVVSLLESGALDDLCISRPKSRLTWGVELPFDANFVTYVWFDALINYLTAV 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D PD     +W A  H++ KDIL+ HA++WP  LL+ +LPL K +  HG+ L +  K
Sbjct: 239 GWPDAPD--FGAWWGAAEHLVAKDILKPHAVFWPTMLLAMDLPLYKHLNVHGYWLVRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P E+    G+  +RYFL+RE+  G D  + ++G   R NADLAN +GNL 
Sbjct: 297 MSKSLGNVVEPREMAGRAGLSGMRYFLLREMVFGADASFTEEGFVGRFNADLANDLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K +  ++P       +D  +  +    +       +     RAL  +  LV 
Sbjct: 357 NRTLAMTAKYFGSVLPAGQEADPADGELAQLAETAVANYLALFRQAQFSRALDALWELVR 416

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++RY DA  PW L K+   DR +TV+   +  +R +A  L   +P+ A  +   L
Sbjct: 417 GLNRYVDATAPWTLFKEGRTDRLATVMRSALGGLRTVAACLSPVMPEAAATLLTQL 472


>gi|260817050|ref|XP_002603400.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
 gi|229288719|gb|EEN59411.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
          Length = 531

 Score =  352 bits (903), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 278/491 (56%), Gaps = 28/491 (5%)

Query: 20  PHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78
           PH+GH Y  ++AD + R+ +L G    +F+TGTDEHG KI +AA   G   + F D  SR
Sbjct: 9   PHLGHLYSAVLADTIHRWQQLKGAGGSVFSTGTDEHGLKIQQAALAHGKDPQQFCDDVSR 68

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +FRD+     + + DFIRTTE RH       W+K+   G IY+G Y GWYS  DEA+  D
Sbjct: 69  HFRDLFSKSHVGHTDFIRTTESRHRKAVEHFWRKLQSAGYIYQGKYEGWYSTSDEAFVPD 128

Query: 139 DEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           ++V +      G D +      + V+WM+EE Y FRLS +  +LL + +S+P  + P + 
Sbjct: 129 NKVMESVDKATGKDIKVSIETGSQVEWMKEENYMFRLSEFGPRLLEWLDSNPRAVYPDKY 188

Query: 193 RNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           R  V  ++  GL+DLS+SR+     WGI +PDDP   +YVW+DAL NYLT  GY DN   
Sbjct: 189 RTLVRGWLGEGLEDLSVSRQRDRLPWGIPVPDDPTQTIYVWLDALVNYLTVCGYPDN--- 245

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
                WPAD HV+GKDI+RFHA+YWPAFL++A L  P+ V +H   L + +K+SKS GNV
Sbjct: 246 -HHAHWPADCHVVGKDIVRFHAVYWPAFLMAAGLDPPRSVVTHSHWLMESQKMSKSKGNV 304

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP + I+    D LRYFL++      DG Y  + + K +NADLA  IG L++R ++  L
Sbjct: 305 VDPFDRIQRYSADGLRYFLLKHGVLEADGDYSDEKVVKVLNADLAGNIGGLLNRCLATSL 364

Query: 371 KDYD-------GMIPT-PGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
                       M P  PG       TE D  +L     +   + ++ +N  I++ L + 
Sbjct: 365 NPTQTFPAFSANMFPVHPGTNSNTLATEEDYKLLKTLQELPGSVDQHYKNFHIYKVLEET 424

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  V + + +    KPW+L  T  D+  AST+L+V +E +R   ILLQ  +P L + +  
Sbjct: 425 MLCVKQANGFVHRHKPWKLGNTPQDQEWASTILHVAMETLRVSGILLQPVMPDLMSGLLS 484

Query: 476 ILFVADENRCF 486
            L V +  R +
Sbjct: 485 RLGVEETERSW 495


>gi|317182290|dbj|BAJ60074.1| methionyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 653

 Score =  352 bits (903), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 195/473 (41%), Positives = 292/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+N D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNNLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++++   ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKFIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|297569842|ref|YP_003691186.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925757|gb|ADH86567.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 510

 Score =  352 bits (903), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 194/507 (38%), Positives = 282/507 (55%), Gaps = 10/507 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LY++T I Y NAQPH+GHAY  ++AD ++RF+RLDG +V   TGTDEHG KIA+AA  AG
Sbjct: 3   LYLTTPIFYVNAQPHLGHAYTAVVADTVSRFNRLDGREVFLQTGTDEHGDKIAQAAATAG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + +VD+ S  FR     L +  D+FIRTT+  H    + + +K+ D+GDIY   Y G
Sbjct: 63  TEARDYVDRISAMFRAAWPPLLVEPDNFIRTTDPHHVAVVQQILQKVYDRGDIYFSDYDG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +  + E+  G    +  A   P Q + E+ YFF +S YQ  L+ + +++PEF
Sbjct: 123 LYCKGCERFLTEKELVDGKCPDHLTA---PEQ-VAEQNYFFAMSRYQQWLIDHIKANPEF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+SF+   L+DL +SR      WGI +P D +++ YVW DAL NY++  GY
Sbjct: 179 ITPERYRNEVLSFLSEPLEDLCISRPVSRLAWGIPLPFDQRFVTYVWFDALINYVSGIGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D PD   A+ W    H+I KDIL+ HAI+WP  L +  L   +++  HG+      K+S
Sbjct: 239 PDGPD--FARRWAGAEHLIAKDILKPHAIFWPTMLKAMGLEPYRRLHVHGYWNVGETKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+ P E++   G D +RYFL+RE++ G D  Y  + +  R N+DLAN +GNL +R
Sbjct: 297 KSIGNVVRPEEMVAAFGADTIRYFLLREMSFGLDSSYSDEAVLARRNSDLANDLGNLFAR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++M+    D  +P PG   + D  +      +L E R  MQ     +AL  V  ++   
Sbjct: 357 SLTMVKNFADSQVPAPGPLNDEDRELRDAALAMLAEYRRQMQAWSFRQALEAVWEVIGRA 416

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +RY     PWEL K      R +TVL   +E +R +   L+  +P  A K+   L +  E
Sbjct: 417 NRYIVHNAPWELAKDPAQAQRLATVLNTLLETLRCITCALKPVMPAAAGKMSLALGLPPE 476

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            R  +     L P        + +FPR
Sbjct: 477 GRLAEQQSWGLLPVGNTVTLGENMFPR 503


>gi|315638476|ref|ZP_07893653.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481467|gb|EFU72094.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 626

 Score =  352 bits (903), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 298/490 (60%), Gaps = 41/490 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G   LF TGTDEHGQKI +AA+N   
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNKNH 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K + D+ S  F+ + D  +ISYD + RTT++RH    + ++ K+ +KGDIYKG Y G+
Sbjct: 63  SPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYEGY 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y +  E+++           Q  N +  P      + ++EE YFFRLS Y+  +L +YES
Sbjct: 123 YCVSCESFF--------TQSQLINQKCCPDCGKETRLLKEESYFFRLSKYEKDILKWYES 174

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYL 239
            P  I+P  ++ E+++F+++GLKDLS++R +F+WGIKIP   +D ++I+YVW+DAL  Y+
Sbjct: 175 EP--IVPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHIIYVWLDALFIYI 232

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           ++     +       F PA +H++GKDILRFHAIY+PAFL+SA+LPLPK + +HG+    
Sbjct: 233 SSLEL--DEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKHIAAHGWWTRD 290

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GN + P  + +  G++A RYFL+RE+  G DG + +  L  R+NA+L+N  G
Sbjct: 291 GEKMSKSKGNALYPKIIADAYGLEAFRYFLLREVPFGNDGDFSETMLINRINAELSNEFG 350

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-------IHR 412
           NL++R + M LK  +G I          + +L+     L+E   ++QN L        +R
Sbjct: 351 NLLNRIIGMSLKYSNGNI--------LQDEVLNFYKAELKEANLHLQNALEFIENFQFNR 402

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            L ++   +S  +      +PW L K N   +A+ ++ +   ++ ++++LL   +PK   
Sbjct: 403 YLEELFKALSVANLSISKYEPWNLIKANETSKANALVSLCANILARVSLLLHPALPKSTQ 462

Query: 472 KI-----FDI 476
           K+     FDI
Sbjct: 463 KVAKALSFDI 472


>gi|2266985|emb|CAA74281.1| MEtRS [Arabidopsis thaliana]
          Length = 616

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 194/517 (37%), Positives = 290/517 (56%), Gaps = 14/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   ++T + Y NA PH+G AY  I AD ++RF RL G  V+F TGTDEHG+KIA +A
Sbjct: 67  EGETFVLTTPLYYVNAPPHMGSAYTTIAADSISRFQRLLGKKVIFITGTDEHGEKIATSA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY+ 
Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L      
Sbjct: 187 DYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239
           +P F+ P  R NEV S++KSGL+D S+SR   D GI +PDD +  +YVW DAL  Y   L
Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDXGIPVPDDDKQTIYVWFDALLGYISAL 303

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T      N + + +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+   
Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLISAGLELPKMVFGHGFLTKD 363

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN IG
Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V+ 
Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483

Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + +  + Y D + PW L K    + + A+  L + +EV+R +A+ L    P L+ +++  
Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRVYSQ 543

Query: 477 L-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509
           L +  D+       D +   LK G ++ +   P+F R
Sbjct: 544 LGYSEDQFNSITWSDTKWGGLKGGQVMEQA-SPVFAR 579


>gi|182415461|ref|YP_001820527.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842675|gb|ACB76927.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 517

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 189/480 (39%), Positives = 282/480 (58%), Gaps = 18/480 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI Y N  PH+GHAYE ++ DV+ARF R  G  V F TGTDEHGQK+  +A+ 
Sbjct: 2   KSFYITTAIDYVNGSPHLGHAYEKVLTDVIARFRRQMGDRVHFLTGTDEHGQKVQASARK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + F DQ S  FR +   L+IS DDFIRTTE+RH    R + +++ DKG+IYK  Y
Sbjct: 62  LGIPPQQFADQVSAEFRALLPKLNISNDDFIRTTEERHKRVVRDVLQRLFDKGEIYKAEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+YS R E +  D +  +  DG +       V  + E  YFF+L AYQD L+ Y   H 
Sbjct: 122 KGFYSTRQEQFLQDKD--RNPDGSWPEI-FGEVTEITESNYFFKLRAYQDWLIEYLTQHE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +F+ P  R+ +V+ F+K  L DL +S  R+  +WGI +P D  Y+ YVW DAL NY +  
Sbjct: 179 DFVFPRYRQKQVLEFLKEPLNDLCISRPRERLEWGISLPFDEGYVTYVWFDALLNYYSAV 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             +D P       WPA  HVIGKDIL   HA+YWP  L +A + LP+ + +HG+ L +G 
Sbjct: 239 --VDKPGT-----WPA-YHVIGKDILVPPHAVYWPIMLQAAGIELPRGIIAHGWWLQRGA 290

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++++ E G DA RYFL+RE+  G+D  + ++    R N++LAN +GNL
Sbjct: 291 KMSKSTGNALNPLDLVGEFGADAFRYFLMREMNVGQDSDFTREQFLVRYNSELANNLGNL 350

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R+++M  +   G++P P A  +++  + ++  +   E     +    H AL + ++ V
Sbjct: 351 VNRTLNMTTRFAGGVLPAPEAGDDTERELRALWDKTRDECLPLNEEFQFHTALERAMTFV 410

Query: 422 SEVDRYFDAQKPWELKKTNP--DRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + Y + + PW+L K+    D+A   T L    E +R     +Q  +P  A KI  +L
Sbjct: 411 TATNAYIEKRAPWKLGKSAEPHDQALLRTSLATMAEALRLAVASVQHVIPAAAEKINGVL 470


>gi|325092268|gb|EGC45578.1| methionine-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 586

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/509 (37%), Positives = 283/509 (55%), Gaps = 43/509 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 52  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 111

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN + F+++A   ++ YD FIRTT+  H +  R  W  ++ +G IY 
Sbjct: 112 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 171

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V    D                VQW  EE Y FRLSA+Q+ 
Sbjct: 172 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSAFQEP 231

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P+F+ P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 232 LLEHFRKNPDFVTPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 291

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P G+++  WPAD+ V+GKDILRFH IYWPAFL++  LPLP+++ +H
Sbjct: 292 ALVNYITYAGY-PFPPGAQS-IWPADVQVVGKDILRFHCIYWPAFLMAVGLPLPRRILAH 349

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   +E  GVDA+R++L  + A   D  Y+   + +R    
Sbjct: 350 GHWTINHEKMSKSTGNVVNPHFAMERFGVDAMRFYLTIDGAQTSDSDYENSYIVERYKKG 409

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE------------I 401
           L  GIGNL SR    +L+           ++  D  +L+   R+ ++            +
Sbjct: 410 LQWGIGNLASR----LLRGKK--------WSVRDSVVLAAQGRLARDKHHELLEAMPGRV 457

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--------STVLYVTVE 453
           +  M+     RAL  ++ ++ + ++YF   +PW L  +             S+ LY T E
Sbjct: 458 KAEMEQLDPRRALNSIMEIIHQTNKYFHDMQPWSLVNSQTQPQTQPQNPTLSSALYTTAE 517

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
            +R   ILLQ F+P  A ++ D+L VA E
Sbjct: 518 SLRITGILLQPFMPHKAAELLDMLGVARE 546


>gi|242808514|ref|XP_002485180.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715805|gb|EED15227.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 578

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 188/493 (38%), Positives = 267/493 (54%), Gaps = 21/493 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M++ DV+ R+ +L G  D +F TGTDEHG KI +AA
Sbjct: 50  QKPFYVTTPIFYVNAAPHVGHLYSMVLGDVIKRWEQLKGNKDAIFLTGTDEHGIKIQQAA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG+ T+ F D N + F+D+A   +IS D FIRTT++ H D  R  W+ +  +G IY  
Sbjct: 110 QEAGMDTQAFCDMNCKTFKDLARAANISNDHFIRTTDEAHKDAVRYFWEMLQHRGYIYTK 169

Query: 123 CYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DEA+Y   +V        G            V+W  E  Y FRLSA++D+L
Sbjct: 170 KHEGWYSVSDEAFYPQSQVEPSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFRDRL 229

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L +YE +P+FIL       V   V+ GL+DLS+SR  +   WG+++P D    +YVW+DA
Sbjct: 230 LEFYELNPKFILSKSHMMNVKQAVEEGLQDLSVSRPVERLTWGVRVPGDDSQTIYVWLDA 289

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPADLH++GKDI+RFH IYWPAFL++ +LPLP+ V  HG
Sbjct: 290 LINYLTKAGYPFTPGKESDLGWPADLHIVGKDIIRFHCIYWPAFLMALDLPLPRHVLVHG 349

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                  K+SKS GNV++P   I+   VD +R+FL      G D  YD   +       L
Sbjct: 350 HWTMNKAKMSKSTGNVVNPFFAIDRFSVDIMRFFLTLRGPLGDDSNYDNSNIVNDYKKYL 409

Query: 355 ANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             G+GN+  R + +        I     G    P  +    E  L    ++++    NM+
Sbjct: 410 QYGVGNVYQRLMGLTKMQLRPSIEAARSGFTTEPNEYDIEFEQYLHTFPKIVE---RNME 466

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
                 AL +++    +   YF    PW+  K +  R   V Y   E +R   ILLQ FV
Sbjct: 467 AFHSKAALREIVDATMKAQNYFHHSAPWQ-HKDDLSRCYRVFYNVSEYLRIAGILLQPFV 525

Query: 467 PKLANKIFDILFV 479
           P+ A+++ D + V
Sbjct: 526 PQKASEVLDRIGV 538


>gi|57242363|ref|ZP_00370302.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017043|gb|EAL53825.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 626

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 295/485 (60%), Gaps = 31/485 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G   LF TGTDEHGQKI +AA+N   
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNKNY 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K + D+ S  F+ + D  +ISYD + RTT++RH    + ++ K+ +KGDIYKG Y G+
Sbjct: 63  SPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYEGY 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           +    + ++EE YFFRLS Y+  +L +YES P  I
Sbjct: 123 YCVSCESFFTQSQLISQCGCPDCGKE---TKLLKEESYFFRLSKYEKNILKWYESEP--I 177

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++ E+++F+++GLKDLS++R +F+WGIKIP   +D ++++YVW+DAL  Y+++   
Sbjct: 178 VPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHVIYVWLDALFIYISSLEL 237

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +       F PA +H++GKDILRFHAIY+PAFL+SA+LPLPK + +HG+    G+K+S
Sbjct: 238 --DEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKYIAAHGWWTRDGKKMS 295

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P  + +  G++  RYFL+RE+  G DG + +  L  R+NA+L+N  GNL+SR
Sbjct: 296 KSKGNAIHPKIIADAYGLEVFRYFLLREVPFGNDGDFSETMLINRINAELSNEFGNLLSR 355

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-------IHRALAQV 417
            + M LK  +G I            +L+     L+E   ++QN L        +R L ++
Sbjct: 356 IIGMSLKYSNGEI--------LQNEVLNFYKAELKEANLHLQNALEFIENFQFNRYLEEL 407

Query: 418 ISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI--- 473
              +S  +      +PW L K N   +A+ ++ +   ++ ++++LL   +PK   K+   
Sbjct: 408 FKALSVANLSISKYEPWNLIKANETSKANALVSLCANILAKVSLLLHPALPKSTQKVAKA 467

Query: 474 --FDI 476
             FDI
Sbjct: 468 LSFDI 472


>gi|283850590|ref|ZP_06367878.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574161|gb|EFC22133.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 650

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/477 (41%), Positives = 286/477 (59%), Gaps = 18/477 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+T I Y NA+PH+GHAY   +AD LARFH L G DV F TGTDEHG KIA+AA+ A
Sbjct: 3   RFFITTPIYYVNAKPHLGHAYTTTVADSLARFHALLGEDVYFLTGTDEHGDKIAEAAKAA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K + D  S  F  +   L I+   FIRTT+  H +  R   +++ DKGDIY G Y 
Sbjct: 63  GQTPKEYADAISGLFSSLWPRLGITPSRFIRTTDADHKEAVRRALQQVYDKGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  D E+    DG   + +  P +++ E+ YFFR+S YQ  LL +  ++P+
Sbjct: 123 GHYCKGCERFLTDKEL---VDGLCPDHKVKP-EYIAEKNYFFRMSKYQGALLDHIRANPD 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P + RNEV+S ++SG L+DL +SR      WGI++P D  ++ YVW DAL NYLT  
Sbjct: 179 FIRPRQYRNEVVSLLESGALEDLCISRPKSRLTWGIELPFDANFVTYVWFDALINYLTAI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D PD S  ++W A  H++ KDIL+ HAI+WP  LL+ +LPL K++  HG+ L +  K
Sbjct: 239 GWPDAPDFS--QWWGAAEHLVAKDILKPHAIFWPTMLLAMDLPLYKRLNVHGYWLVRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P+++  + G+  +RYF +RE+  G D  Y  +    R NADLAN +GNL 
Sbjct: 297 MSKSLGNVVEPLDMAAKAGLSGMRYFFLREMVFGSDASYSDEAFIGRFNADLANDLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN----MQNQLIHRALAQVI 418
           +R+++M  K +  ++P   A TESD +   + SR+  +  +N           RAL  + 
Sbjct: 357 NRTLAMTAKYFGSVVP---AATESDPADGEL-SRLALDATQNFVALFGAAQFSRALKALW 412

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            LV  +++Y DA  PW L K+   +R  TV+   +  +R+ A  L   +P+ A K+ 
Sbjct: 413 ELVRGLNKYVDAMAPWTLFKEGRTERLGTVMATALGGLRRAAACLLPVMPEAAEKLL 469


>gi|255936271|ref|XP_002559162.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583782|emb|CAP91800.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 570

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 191/492 (38%), Positives = 269/492 (54%), Gaps = 20/492 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           +  +  Y++T I Y NA PH+GH Y M+IAD++ R+  L G  D    TGTDEHG KI +
Sbjct: 47  RSNKPYYVTTPIFYVNAAPHVGHLYTMVIADIMKRWQVLLGNTDAQLLTGTDEHGMKIQQ 106

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AG+ T+ F D N R F  +A   +I  D FIRTT+  H D  +  W+ +  +G IY
Sbjct: 107 AAIQAGMDTQAFCDMNCRTFEALAKAANIDNDHFIRTTDPAHRDAVQYFWEMLQHRGYIY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQD 174
              + GWYS+ DE +Y   +V    D      +         V+W  E  Y FRLSA++D
Sbjct: 167 TSRHEGWYSVSDETFYPQTQVQNSLDPSTGRKRMVSIETGKEVEWSSETNYHFRLSAFKD 226

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
           +LL  Y+    FI P      VI+ V++GL+DLS+SR T    WGI +P D    +YVW+
Sbjct: 227 RLLDLYKREDPFISPTSYTAAVINGVETGLQDLSISRPTERLTWGIPVPGDDTQTIYVWL 286

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY   P       WPADLHV+GKDI+RFH +YWPAFL++ +LPLP+ V  
Sbjct: 287 DALVNYLTKAGYPFPPGQENTSAWPADLHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 346

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG      EK+SKS GNV++P   IE  GVD +R+FL        D  +D   + +    
Sbjct: 347 HGHWTMNHEKMSKSTGNVVNPFFAIERFGVDGMRFFLAYRGGLADDADFDNSFIIRDYKK 406

Query: 353 DLANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            L  GIGNL  R++      L+ Y  D +     A T  D     +  +   ++ E M+N
Sbjct: 407 LLQGGIGNLALRTIGCARGNLRSYIMDALSNKLPAATPEDLDHQKMLEQTPPKVAEFMEN 466

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                AL + +S++ + ++YF A +PW   KT+  RA   +Y   E +R   ILLQ F+P
Sbjct: 467 LNPRAALQETMSIIEKTNKYFHAAEPW---KTSNSRA---IYNVAESLRIAGILLQPFMP 520

Query: 468 KLANKIFDILFV 479
             ++ + ++L V
Sbjct: 521 GKSHDLLELLCV 532


>gi|123507933|ref|XP_001329523.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121912479|gb|EAY17300.1| hypothetical protein TVAG_266630 [Trichomonas vaginalis G3]
          Length = 710

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 185/513 (36%), Positives = 297/513 (57%), Gaps = 12/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            + + ++T I Y N  PHIGH +   + + ++ +++L G+D +++TGTDEHG K+   A 
Sbjct: 197 EKPMCLTTPIYYVNGVPHIGHVFTTTLVETISNWYKLRGIDCIYSTGTDEHGLKVQTTAA 256

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G   K + D+ S+ F D  +  D+  D FIRTT++ H      LW  + +KG IY+G 
Sbjct: 257 SKGFLPKEWCDKTSKTFFDAFEQFDLHPDVFIRTTDENHIKVATKLWTILHEKGYIYEGK 316

Query: 124 YSGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y GWYS R+E +  +++    V  G +    +     ++W  E  + F+LSA Q +LL +
Sbjct: 317 YEGWYSKREECFVPENQIKVVVENGVEKHINSEDGAELEWSSETNWMFKLSAMQQQLLDW 376

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y+++P  I P    N +   V  GL DLS+SR+   WGI +P+DP+  MYVWIDAL NYL
Sbjct: 377 YDANPTCITPRPYYNLIKLMVSRGLNDLSVSRQNVTWGIPVPNDPKQTMYVWIDALANYL 436

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  G+  + +G+  + WP D+H +GKDI++FHAIYWPAFL++A +P  K++  HG+    
Sbjct: 437 TVAGW--DGEGNFGR-WPCDIHTVGKDIVKFHAIYWPAFLIAAGIPCYKRLLVHGWWTKN 493

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKSLGN +DPI +++  G++A++Y+L+RE     D  Y    +  R N DLA+ + 
Sbjct: 494 EEKMSKSLGNTLDPIVLMKFWGLEAVKYYLLRECTLVSDSDYSDKAMLNRYNNDLADVLW 553

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R +S  L   D ++PTPG + E D+ ++     +   +   M       AL  + +
Sbjct: 554 NLVIRIISKKLCP-DMVVPTPGEYQEVDKDLIESIVTIPGTVDHFMAFGETRHALDSIFA 612

Query: 420 LVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + ++++Y    +PW+L K+T+  R +TV Y  +E +R LA  L  F+P+ A  I + L 
Sbjct: 613 SIHDLNKYLTDMQPWKLVKETDLSRYNTVFYTLLECLRILATSLYCFMPQTATTILNGLG 672

Query: 479 VADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
           V  +N   + + +   LKPG  L +    +FP+
Sbjct: 673 VG-KNFPPEEIFKYGFLKPGTKLMEGMPILFPK 704


>gi|308063822|gb|ADO05709.1| methionyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 650

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 195/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAAKL 472


>gi|121706923|ref|XP_001271676.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119399824|gb|EAW10250.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 574

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 271/491 (55%), Gaps = 19/491 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
            ++  Y++T I Y NA PH+GH Y M+IAD+L R+  L G  +    TGTDEHG KI +A
Sbjct: 51  SKKPYYVTTPIFYVNAAPHVGHFYTMVIADILKRWQVLLGNKNAQLLTGTDEHGMKIQQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG+ T+ F D N + F  +A   +I  D FIRTT+  H +  +  W+ ++ +G IY 
Sbjct: 111 ALAAGMDTQAFCDMNCKTFEALAKAANIDNDHFIRTTDPAHKEAVQYFWEILNHRGYIYT 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQ------YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y   +V    D                V+W  E  Y FRLSA+QD+
Sbjct: 171 SKHEGWYSVSDETFYPPTQVQNSLDPSTGRKRMVSTETGKEVEWSSETNYHFRLSAFQDR 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233
           LL +Y S  +FI P   + +++  V SGL DLS+SR  +   WGI +P D    +YVW+D
Sbjct: 231 LLEFYSST-DFIAPGNYKTDIVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLD 289

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP++V  H
Sbjct: 290 ALVNYLTRAGYPFVPGQESRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRRVLVH 349

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   I+  GVD +R+FL  +     D  YD   + +     
Sbjct: 350 GHWTMNREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAYQGGLVGDADYDNSFIIRDYKKM 409

Query: 354 LANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           L  GIGNL  R++      L+ Y  D         T +D+   S+      ++ E M+  
Sbjct: 410 LQWGIGNLAHRTIGCAKGKLRSYIQDAAADKLPPATPADQEHQSLLEHTPGKVAEQMEKL 469

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
               AL  +++++   ++YF A +PW    +NP  +  VLY   E +R   ILLQ F+P 
Sbjct: 470 NPRAALQDIMTIIERTNKYFHAAEPW----SNPAESQRVLYNVAESLRISGILLQPFMPS 525

Query: 469 LANKIFDILFV 479
            +N++ DIL V
Sbjct: 526 KSNELLDILRV 536


>gi|168023212|ref|XP_001764132.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684572|gb|EDQ70973.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 640

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 185/480 (38%), Positives = 277/480 (57%), Gaps = 17/480 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  ++T + Y NA PH+G AY  I AD LARF RL G DV F TGTDEHG+KIA AA  
Sbjct: 86  ERFTVTTPLYYVNAAPHMGSAYPTIAADALARFQRLQGRDVNFITGTDEHGEKIALAAAA 145

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   K   D  +  ++ +   L I+YD FIRTT+  H       +K++  KGDIY+  Y
Sbjct: 146 KGRAPKEHCDAVAAEYQLLWKELGIAYDKFIRTTDSHHETLVDEFYKRVEAKGDIYQAKY 205

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++DE+ +      +     P +   E+ YFF LS YQ  L     S+P
Sbjct: 206 EGLYCVNCEEYKDEDELIEDLCCPIH---RKPCEARNEDNYFFALSKYQQPLEELLSSNP 262

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  R NEV  +VK GL+D S+SR   +WGI +P +P+  +YVW DAL  Y++    
Sbjct: 263 NFVRPSFRMNEVQGWVKEGLRDFSISRAAVEWGIPVPTNPKQTIYVWFDALLGYISAL-- 320

Query: 245 LDNPDG-------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
              P+G       +  + WPA +H+IGKDILRFHA+YWPA L+SA+LPLP+ VF HGF+ 
Sbjct: 321 --LPEGKEPILTNATERGWPASVHIIGKDILRFHAVYWPAMLMSADLPLPEAVFGHGFLT 378

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN I+P E++ + G D++RY+ ++EI  GKDG + +    + VNA+LAN 
Sbjct: 379 KDGLKMGKSLGNTIEPRELVSKFGPDSVRYYFLKEIEFGKDGDFSEKRFIEIVNANLANT 438

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL++R++ ++ K+ D +IP   +    +  I  + +  + + + +        A   +
Sbjct: 439 IGNLLNRTLGLLKKNCDAVIPVDSSSISEENPIRILAAESVSKAKLHYSELDYSSACDII 498

Query: 418 ISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +  + Y   + PW L K   +  + A+  L V +E +R +A+ L   VP+L N+I+
Sbjct: 499 LGIATAGNLYMSEKAPWSLFKEGGSAAEDAAQELTVILEAVRIIAVALSPVVPELCNRIY 558


>gi|148906837|gb|ABR16564.1| unknown [Picea sitchensis]
          Length = 704

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 187/472 (39%), Positives = 269/472 (56%), Gaps = 9/472 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA AA   G  
Sbjct: 152 LTTPLYYVNAPPHMGSAYTTIAADAMARFQRLQGKKVVFITGTDEHGEKIAMAAAAKGQN 211

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D+ + +++ +   LDI+YD FIRTT   H    +  + +I  KGDIY   Y G Y
Sbjct: 212 PKDHCDRIACDYQALWKDLDITYDKFIRTTNPCHEAIVKEFYTRIIAKGDIYHADYEGLY 271

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +  E+    + +       P +  +E+ YFF LS YQ  L     ++P F+ 
Sbjct: 272 CVNCEEYKDGKELL---EDECCPIHRKPCELRKEDNYFFSLSKYQKPLEELLTANPNFVQ 328

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  R NEV S+VK GL+D S+SR T +WGI +P+D +  +YVW+DA+  Y++     +N 
Sbjct: 329 PPYRLNEVQSWVKGGLRDFSISRATVEWGIPVPNDSKQTIYVWVDAMLGYVSALLKDENE 388

Query: 249 ---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D + A  WPA LH+IGKDILRFHA+YWPA L+SANL LP  VF HGF+   G K+ K
Sbjct: 389 PTLDNAVAGGWPASLHLIGKDILRFHAVYWPAMLMSANLKLPATVFGHGFLTKDGLKMGK 448

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV++P ++I+  G DA+RYF +REI  G DG Y ++     VNA LAN IGNL++R+
Sbjct: 449 SLGNVLEPKDLIDRFGCDAVRYFFLREIEFGNDGDYSEERFTNIVNAHLANTIGNLLNRT 508

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           + ++ +     +                   ++++ R +  N   + A   VI + +  +
Sbjct: 509 LGLLKRYCQSTLTIDSNSAAEYNPFKEHVMELVEKARLDYMNLSFNSACEAVIDIANAGN 568

Query: 426 RYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y D   PW L K   ++ + A+  L V +E +R  A+ L   VP+L  KI+
Sbjct: 569 VYLDEHTPWSLFKKGDSSAEEAAKDLVVILEAMRITAVALSPIVPRLCRKIY 620


>gi|226226140|ref|YP_002760246.1| methionyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089331|dbj|BAH37776.1| methionyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 515

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 198/514 (38%), Positives = 286/514 (55%), Gaps = 19/514 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++TAI Y N  PH+GHA E I ADV+AR+ RL G DV    G DEHGQK+ + A   
Sbjct: 3   RFYLTTAIDYANGDPHLGHALEKIGADVIARYRRLCGDDVHLLIGMDEHGQKVQQTAAKE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--DIYKGC 123
           GV  + F D  +  F+ M   L ISYD FIRTTE  H    + L ++I+++   D Y+  
Sbjct: 63  GVAPQAFTDTIAARFQGMWSRLGISYDQFIRTTEAHHKLGVQTLIRRIAERNPDDFYERS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+G Y +  E++  D ++    DG+        ++ +EE  +FFRLS YQ  L     S+
Sbjct: 123 YTGMYCVGCESFKQDADI---VDGKCVLHPTRTLEEVEERNWFFRLSKYQGFLQDLLASN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNYL 239
           P FI P  RRNE++  +  GL+D+S SR   DW +  P    +      YVW DAL NYL
Sbjct: 180 PSFIEPSSRRNEILGLLAQGLEDISASRARLDWAVPFPLVLSNGETQGTYVWFDALPNYL 239

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T TG+   PD    + WPADLH+IGKDI RFH + WPA L +A LPLPK+V++HGF+   
Sbjct: 240 TATGF---PDEGYDQRWPADLHIIGKDITRFHVVIWPAMLQAAGLPLPKQVWAHGFVQLG 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GE+ SKS G  +D  E I+  GVDA RY L+RE+    DG +  +  ++R  ADLAN  G
Sbjct: 297 GERFSKSAGVKLDLGEAIDRFGVDAFRYVLLREVPFDGDGNFSWERFEERYTADLANAFG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL SR+++M+ K +DG++PT  A  E+++      +   + +      QL H  LA V  
Sbjct: 357 NLASRAMAMVEKYFDGVVPT-AAMPEAEQGDAEEIAEYHRAMHGENGWQL-HEGLAAVGR 414

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  + +  A  PW + K    RA    +L   +  I +  +LL  F+P+ + +++ +L
Sbjct: 415 LTARANEFTAATAPWTVAKDESRRAELEVILASLIRRIARQTVLLVPFMPEKSAQLWRML 474

Query: 478 FVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               E   + F  L+      + + K  DP+FPR
Sbjct: 475 GAPGEVSAQRFDQLESLDVSAWQVRKG-DPLFPR 507


>gi|208434910|ref|YP_002266576.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432839|gb|ACI27710.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 650

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 200/510 (39%), Positives = 305/510 (59%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETALLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKVTAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509


>gi|302418792|ref|XP_003007227.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354829|gb|EEY17257.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 620

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 187/521 (35%), Positives = 279/521 (53%), Gaps = 41/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+++ I Y NA PH+GH Y MI+AD L R+  L G D L+ TGTDEHG K+ +AA  
Sbjct: 66  KPFYVTSPIFYVNASPHVGHMYTMILADSLKRWQTLRGRDALYCTGTDEHGMKVQRAAAK 125

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K F D N+  FR +A    I  D F+RTT+  H D  +  W  +   G +Y+  +
Sbjct: 126 QGIPPKAFCDNNADKFRQLAAACGIDNDFFVRTTDADHMDAVQHFWHLLRAGGHVYESTH 185

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYN------AQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWY + DE +Y +DEV +    Q         A  + V+W EE+ Y FR+ A +D+LL 
Sbjct: 186 SGWYCVSDECFYAEDEVERAIVPQTGRTIMASIATGSEVEWTEEKNYHFRMKAMRDRLLQ 245

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
           +Y+ +P++I+P  R NEV+S+V+  L+DLS+SR    FDWGI++PDDP   +YVW+DAL 
Sbjct: 246 FYDDNPDWIVPRARMNEVVSWVRHNLEDLSISRPVSRFDWGIRVPDDPSQTIYVWVDALI 305

Query: 237 NYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NYLT  G+    P    +  WPAD+HVIGKDI+RFH +YWPA LL+  LP PK++ SH  
Sbjct: 306 NYLTKAGFPAWAPGDEHSGGWPADVHVIGKDIVRFHGVYWPALLLAVGLPPPKQLLSHAH 365

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                +K+SKS+GNV++P + IE   +D +RYF++R+     D  Y+   +  R   DL 
Sbjct: 366 WTLGKKKMSKSVGNVVNPFQAIERWDLDTMRYFMLRDGGLENDADYENRFIFARYEKDLQ 425

Query: 356 NGIGNLVS---RSVSMILKD--------------------------YDGMIPTPGAFTES 386
             +GN +S   RS    + D                           +     P +    
Sbjct: 426 WTLGNALSRITRSTKWNVADAVRWARDHHHQAAAAAAAHGAEVEAEVEASADAPQSRQRR 485

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-S 445
             +++    RV+    E   N     A+   ++L+ E +++     PW+  K   D A +
Sbjct: 486 LAALVDETPRVMAAAMETDLNP--SAAIKAAMTLLVEANKFIADSAPWDKTKVPSDAARN 543

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +++   E +R   +LLQ F+P    ++ DIL V    R F
Sbjct: 544 AIVFHAAEALRVAGVLLQPFMPGKMGEMLDILGVQPARRTF 584


>gi|312210263|emb|CBX90350.1| similar to methionyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 585

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 190/503 (37%), Positives = 274/503 (54%), Gaps = 20/503 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y NA PH+GH Y M++AD+  R+H L G   L  TGTDEHG KI +AA 
Sbjct: 49  KKPYYITTPIFYVNAAPHVGHLYTMVLADIHKRWHVLKGEKALLCTGTDEHGLKIQRAAA 108

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV  K F D+ +  F+D+A   +I+ D F+RTT++ H D  +  W  + +KG IY+  
Sbjct: 109 KAGVDPKTFCDRGAEIFKDLAKKAEIANDHFVRTTDREHKDAVQYAWFLLQEKGLIYEQK 168

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKLL 177
           + GWYS+ DE +Y    V    D              + V+W  EE Y FRLS ++DKLL
Sbjct: 169 HEGWYSVSDECFYPQSGVQPWLDPVTGRKIITSIETGSEVEWSSEENYHFRLSLFRDKLL 228

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
            +++ +PE+I P  R  EVI+ V+SGL+DLS+SR     +WGI++P D    +YVW+DAL
Sbjct: 229 QFFKENPEWITPEHRMKEVIAAVESGLEDLSISRPYDRLNWGIRVPGDDTQTIYVWLDAL 288

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY T  GY   P    A  WPAD HVIGKDI+RFH IYWPAFL++ NLPLP+K+ +H  
Sbjct: 289 LNYATKAGYPWAPGYEHAGGWPADCHVIGKDIVRFHCIYWPAFLMALNLPLPRKIMTHAH 348

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKS G V+DP   ++  G D +R++L  +     DG YD   + K     L+
Sbjct: 349 WTLFGKKMSKSTGTVVDPFHALDRFGPDVMRFYLATDGGTVDDGNYDNSRIIKLYTTFLS 408

Query: 356 NGIGNLVSR-------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             +GN+ SR       SV   ++   G  P   A     +   +    V  ++ +  +  
Sbjct: 409 QQLGNMASRVMRGKKWSVRGAVQRVGGRSPDEWAEGPGSKFYKNSLCNVAAQMDDAFETY 468

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAS----TVLYVTVEVIRQLAILLQ 463
              RA   +   V   +++F    PW+      PD        ++++  E +R   ILLQ
Sbjct: 469 DPRRATLLISEFVRGSNKFFQMSSPWDKCLSYAPDEPGEEVDKIIFLAAESLRIAGILLQ 528

Query: 464 AFVPKLANKIFDILFVADENRCF 486
            ++P  A ++ D L VA E R F
Sbjct: 529 PYMPNKAAELLDQLGVARERRGF 551


>gi|315586930|gb|ADU41311.1| methionine--tRNA ligase [Helicobacter pylori 35A]
          Length = 650

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    ++    D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|317012812|gb|ADU83420.1| methionyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 650

 Score =  349 bits (895), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 200/510 (39%), Positives = 302/510 (59%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A  
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSASL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKST-KITAYYSKELEKAHQILDNANSFVPRMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAAKLASAFHTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509


>gi|224369775|ref|YP_002603939.1| methionyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223692492|gb|ACN15775.1| MetS [Desulfobacterium autotrophicum HRM2]
          Length = 648

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 199/521 (38%), Positives = 295/521 (56%), Gaps = 21/521 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y +T I Y NA+PH+GHAY  I  DV AR+ R+      F TGTDEHG KI +
Sbjct: 1   MKTSDPRYFTTPIYYVNAKPHLGHAYTTIATDVAARYSRMCARPTYFLTGTDEHGDKIVE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA     + K +VD+ S  F+++   L+IS D FIRTT+  H      L  +I + GDIY
Sbjct: 61  AATREETSPKAYVDRISALFKNLWPRLNISNDHFIRTTDPDHIKVVENLLTRIHESGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y G Y    E +Y + E+    DG+  +    P + ++E  YFF +  YQD L+ + 
Sbjct: 121 FSEYEGIYCFGCERFYQEREL---VDGKCPDHGTVPKK-IKESNYFFAMGKYQDWLIDHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+FI P   RNEV+SF+K  L+DL +SR      WGI +P D  Y+ YVW DALTNY
Sbjct: 177 TRNPDFIRPERYRNEVLSFLKEPLEDLCISRPKSRLTWGITLPFDHDYVTYVWFDALTNY 236

Query: 239 LTTTGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           L+  GY   PDG + K FWP   H + KDI++ H IYWP  L +A +   + +  HGF  
Sbjct: 237 LSALGY---PDGERFKTFWPHTRHFVAKDIIKPHGIYWPCMLKAAGIDPYQSLNVHGFWN 293

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKS+GNV DP+E+I+  GVD  RYFL+RE+  G D  + +D + +R+N+DLAN 
Sbjct: 294 VGGSKMSKSIGNVTDPVEIIDTYGVDTFRYFLMREMVFGLDSNFTEDSIVQRINSDLAND 353

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL SR VSM+ + + G  P      + D S+       +++   +M+    H+AL  V
Sbjct: 354 LGNLFSRVVSMVHRYFKGETPGVDKGLDKDLSLEHQAWECVEKFTLHMEETEFHKALISV 413

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              +S ++RY D Q PW L K +P++     TV+Y  V+ +R ++ L+   +P  ++++ 
Sbjct: 414 WEFISTMNRYIDTQAPWTLSK-DPEKKPALETVMYNLVQGLRTVSCLIYPIMPDTSHRML 472

Query: 475 DILFV-ADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPR 509
            IL +    +R F ++ +      +K G ++ K    +FPR
Sbjct: 473 TILNIQPPRDRDFYTMAEIFPWHGVKAGTLIQKA-PVLFPR 512


>gi|159107898|ref|XP_001704224.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157432280|gb|EDO76550.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 582

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 297/560 (53%), Gaps = 53/560 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K+Y++T I Y N +PHIGH +  ++AD L RF +L G +    TGTDEHGQK+ ++A
Sbjct: 2   EARKVYLTTPIYYVNGKPHIGHVFTTLLADTLKRFRKLQGFETYLMTGTDEHGQKVQQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  G+  + + D  ++ F     +   +  D F+RTT  +H +    LW+K+   G IYK
Sbjct: 62  EKMGLQPQQWCDNMAKTFETYFLENFGLCPDVFMRTTMPKHVEMATKLWEKLRTAGLIYK 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKL 176
             Y GWY + DEA+  +  +  G D Q    +       P  ++ EE Y FRLS++Q+ L
Sbjct: 122 DKYEGWYCVADEAFVTETNLKDGVDAQGKPCKVSAESGQPCVFLSEENYKFRLSSFQEPL 181

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
           L +Y+ +PE I+P  R+ E++SF+ SGL D+S+SR      WGI +P D  ++MYVWIDA
Sbjct: 182 LKFYQDNPEIIIPAFRQAEIVSFIHSGLHDISISRSKDKISWGIPVPGDSDHVMYVWIDA 241

Query: 235 LTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L  YLT      NPDG+  ++ WPAD+  +GKDI RFH +YW AFL+ A++P P++ F H
Sbjct: 242 LAIYLTAADSTINPDGTFSSRLWPADVQFLGKDIARFHCVYWLAFLMGASIPCPRRFFIH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+     +KI KSLGN +DP+ ++E  G+D ++YF++RE +   D    ++ +  R  +D
Sbjct: 302 GWWTINHQKIGKSLGNALDPMSLVEAYGLDGVKYFMLREGSPANDPGITEELISMRTESD 361

Query: 354 LANGIGNLVSRSVSMIL----------KDYDG--------------------MIPTPGAF 383
           LAN +GNL  R  +  L          K ++G                    ++P     
Sbjct: 362 LANVLGNLTMRCTADSLLPDRAWTDPSKLFEGVSFAQIRSLWMKSRRSSIAELLPADAGE 421

Query: 384 TESDESILSVCS---------RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
            E+  SI+ +            + +E+   M N  I  AL+++  ++  ++ Y     PW
Sbjct: 422 RENISSIIKINDISDLLDKGLAICEEVTNLMDNIDIPGALSKIFEILVGINNYIQLTMPW 481

Query: 435 EL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---L 489
            L  K    +    V+Y   E++R  A LL  F+P+ A  I D L V+ E+R  +     
Sbjct: 482 VLIKKAETKNGHEFVMYCANELLRVCATLLLPFIPQKAPLILDQLGVSSEDRVIKREVLT 541

Query: 490 DQRLKPGFMLHKTFDPIFPR 509
              + PG  L +   P+FP+
Sbjct: 542 IGYIAPGLTLGEKLPPLFPK 561


>gi|87303680|ref|ZP_01086455.1| methionine--tRNA ligase [Synechococcus sp. WH 5701]
 gi|87281785|gb|EAQ73750.1| methionine--tRNA ligase [Synechococcus sp. WH 5701]
          Length = 529

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 186/471 (39%), Positives = 262/471 (55%), Gaps = 9/471 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G AY  +  D LARF RL G  V+F TG DEHG KI + A+ AG+T
Sbjct: 5   LTTPLYYVNDKPHLGSAYTTLACDALARFQRLMGRQVVFITGCDEHGLKIQRTAEAAGLT 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   DQ S  +RD+     ISYD FIRT+E RH       ++++   GD+ +G   GWY
Sbjct: 65  PQAHCDQVSDQYRDLWQRWQISYDRFIRTSEPRHRLLVEQFYRRVEAAGDVVEGRQRGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D    +       +    P++W +E   FFRLS YQ  +    +  P FI 
Sbjct: 125 CVACEEFKDDPPEARAPQ---CSTHQRPLEWRDELNLFFRLSRYQQAIEELIQ-RPGFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDN 247
           P  RR EV +FV  GL D S+SR    WGI +P    +  YVW DAL  YLT      D 
Sbjct: 181 PASRRREVENFVAQGLHDFSISRLDLPWGIPVPGHEGHTFYVWFDALLGYLTALLEPGDP 240

Query: 248 PDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           PD +    + WPA +HVIGKDILRFHA+YWPA LLSA L LP++VF HGF+  +G+K+ K
Sbjct: 241 PDLALLSQRGWPASIHVIGKDILRFHAVYWPAMLLSAGLDLPERVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP E++E  G DA+R++L+R+I  G DG   +      VN DLAN IGNL++R+
Sbjct: 301 SLGNVLDPGELLERCGPDAVRWYLLRDIPFGDDGDVQQQRFSDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  + +D  +P P     S   +        +++ E M+     +A A  + L    +
Sbjct: 361 SSMARRWFDQAVPAPSEAVGSSHPLAQAALLAREQVIEGMERLDFRQAAAAALQLAISAN 420

Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIF 474
            + + Q PW   K    R      LY  +E  RQ+A+LL   +P L+ ++ 
Sbjct: 421 GFLNDQAPWSRMKQEGQRQQVADDLYAVLEAARQVALLLAPILPDLSARML 471


>gi|188527820|ref|YP_001910507.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144060|gb|ACD48477.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 662

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAAKL 472


>gi|261838373|gb|ACX98139.1| methionyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 653

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D     F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKL 472


>gi|224112799|ref|XP_002316296.1| predicted protein [Populus trichocarpa]
 gi|222865336|gb|EEF02467.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 186/479 (38%), Positives = 276/479 (57%), Gaps = 9/479 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A  
Sbjct: 68  ETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFVTGTDEHGEKIAASAAA 127

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T     D  S+ ++ +   L+I+YD FIRTT+ +H    +  + ++  KGDIY+  Y
Sbjct: 128 AGSTPSEHCDVISQAYKTLWKDLEITYDKFIRTTDPKHEGIVKEFYSRVLAKGDIYRADY 187

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++ E+    D +       P    +E+ YFF LS YQ +L      +P
Sbjct: 188 EGLYCVNCEEYKDEKELL---DNKCCPTHLKPCIERKEDNYFFALSKYQKQLEENLTQNP 244

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TG 243
           +F+ P  R NEV S++KSGLKD S+SR + DWGI +P+D +  +YVW DAL  Y++  + 
Sbjct: 245 KFVQPPFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSA 304

Query: 244 YLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             + PD   A    WPA LH+IGKDILRFHA+YWPA L+SA + LPKKVF HGF+   G 
Sbjct: 305 ENEQPDLQTAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGVDLPKKVFGHGFLTKDGM 364

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN ++P E++   G DA+RYF +RE+  G DG Y ++     VNA LAN IGNL
Sbjct: 365 KMGKSLGNTLEPNELVHNFGSDAVRYFFLREVEFGSDGDYSEERFINIVNAHLANTIGNL 424

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+    +    A      ++     +++++ R + +N  +  A   V+ + 
Sbjct: 425 LNRTLGLLKKNCQSTLAVDSAVAAEGNALKDTIEKLVEKARIHYENLSLSSACEAVLEIG 484

Query: 422 SEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + Y D   PW   K      + A+  L + +E +R +AI L    P    +I++ L
Sbjct: 485 NAGNAYMDENAPWTRFKQGGAASEAAAKDLVIILEAMRIVAIALSPVAPSFCWRIYEQL 543


>gi|317180163|dbj|BAJ57949.1| methionyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 650

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|296086256|emb|CBI31697.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 188/490 (38%), Positives = 274/490 (55%), Gaps = 14/490 (2%)

Query: 3   ERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ERE      ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA
Sbjct: 63  EREVSDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIA 122

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA   G +     D  S+ ++ +   LDI+YD FIRTT  +H    +  + ++   GDI
Sbjct: 123 TAAAACGSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDI 182

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L   
Sbjct: 183 YRADYEGLYCINCEEYKDEKELL---ENNCCPMHLKPCVLRKEDNYFFALSKYQKLLEET 239

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
              +P+F+ P  R NEV S++KSGL+D S+SR + DWGI +P+D +  +YVW DAL  Y+
Sbjct: 240 LTQNPDFVQPSFRLNEVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYI 299

Query: 240 TTTGYLDN--PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +     DN  PD   A    WPA LH+IGKDILRFHA+YWPA LLSA L LPK VF HGF
Sbjct: 300 SALSE-DNEQPDLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGF 358

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G K+ KSLGN ++P ++++  G DA+RYF +RE+  G DG Y +D     VNA LA
Sbjct: 359 LTKDGMKMGKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLA 418

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N IGNL++R++ ++ K+    +           +      +++++ +   +N  +  A  
Sbjct: 419 NTIGNLLNRTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACE 478

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANK 472
            V+ + +  + Y D + PW L K     +      L + +E +R +AI L    P+L+ +
Sbjct: 479 AVLEIGNAGNLYIDERAPWSLFKQGAAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLR 538

Query: 473 IFDILFVADE 482
           I++ L    E
Sbjct: 539 IYEQLGYTKE 548


>gi|297380215|gb|ADI35102.1| methionyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 653

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 289/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCTISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYKKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F     H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHF-ACTRHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|108563402|ref|YP_627718.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837175|gb|ABF85044.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 643

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 199/510 (39%), Positives = 303/510 (59%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LS Y+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSTYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASM 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSATKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509


>gi|318041393|ref|ZP_07973349.1| methionyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 522

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 263/471 (55%), Gaps = 9/471 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G AY  +  D LARF RL G  V+F TG DEHGQKI + A+ AG++
Sbjct: 5   LTTPLYYVNDKPHLGSAYTTLACDALARFQRLKGERVVFITGCDEHGQKIQRTAEAAGLS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D  S  +R++ D   IS++  IRTT+ RH       + ++   GDI +G   GWY
Sbjct: 65  PQAHCDGVSAQYRELWDRWQISHNRLIRTTDPRHQRIVEQFFARVEANGDIVEGRQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D    +  +   +     P++W +E   FFRLS YQ+++ +   + P FI 
Sbjct: 125 CVACEEFKDDPHEAQDPECPTH---RRPLEWRDELNLFFRLSRYQEQIEALI-AQPGFIQ 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYL 245
           P  RRNEV +FVK GL+D S+SR    WGI +P    +  YVW DAL  Y+T     G  
Sbjct: 181 PASRRNEVENFVKQGLRDFSISRVNLPWGIPVPGHEGHTFYVWFDALLGYITALLEEGDA 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D + ++ WPA +HVIGKDILRFHA+YWPA LLSA L LP KVF HGF+  +G+K+ K
Sbjct: 241 PDLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSAGLELPAKVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP E++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL++R+
Sbjct: 301 SLGNVLDPAELLERCGRDAVRWYLLRDIPFGDDGDFQQQRFSDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  + ++  +P       SD  +    +     +   ++      A    + L    +
Sbjct: 361 SSMARRWFEECVPPATGAANSDHPLAQAAATARTTVLTALEQLDFRSAAEAALQLAIAAN 420

Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIF 474
            + + Q PW   K    R      LY  +E  R  A+L+   +P L+ ++ 
Sbjct: 421 GFLNEQAPWSRMKQEGTREQVADDLYAVLEAARITALLMAPLLPDLSERML 471


>gi|210135200|ref|YP_002301639.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133168|gb|ACJ08159.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 650

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETALLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D     F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMVHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSATKL 472


>gi|317178659|dbj|BAJ56447.1| methionyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 650

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    ++    D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D     F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKST-KITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|15645045|ref|NP_207215.1| methionyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501030|sp|P56127|SYM_HELPY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2313521|gb|AAD07483.1| methionyl-tRNA synthetase (metS) [Helicobacter pylori 26695]
          Length = 650

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKST-KITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKL 472


>gi|218192309|gb|EEC74736.1| hypothetical protein OsI_10474 [Oryza sativa Indica Group]
          Length = 602

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 192/516 (37%), Positives = 290/516 (56%), Gaps = 22/516 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA PH+G AY  I AD +ARF RL    V+F TGTDEHG+KIA +A+  G  
Sbjct: 65  LTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEACGRN 124

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D  S +++ +   LDI YD FIRTT+++H       + ++ D GDIY+  Y G Y
Sbjct: 125 PKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADYEGLY 184

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y ++ E+    + +       P    +E+ YFF LS YQ +L      +P F+ 
Sbjct: 185 CVSCEEYKDEKEL---GENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNFVR 241

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  R NEV  +VKSGL+D S+SR + +WGI +P+D +  +YVW DAL  Y++    LD  
Sbjct: 242 PSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYIS--ALLD-- 297

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG KA         WPA LH+IGKDILRFHA+YWPA L+SA + +P  VF HGF+   G 
Sbjct: 298 DGEKASLQQAVERGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGM 357

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN ++P +++   GVDA+RYF +RE+  G DG Y ++     VNA LAN IGNL
Sbjct: 358 KMGKSLGNTLEPKDLVNRFGVDAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNL 417

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+    +           S+      ++ + ++  +N L+  A   ++ + 
Sbjct: 418 LNRTLGLLKKNCKSTLAFDSIAAADGISLKDNVENLVDKAKDQFENLLLSSACETLMEIG 477

Query: 422 SEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL- 477
           +  + Y D Q PW   K    + ++A+  L + +E +R +AI L    P L+ +I+  L 
Sbjct: 478 NLGNLYIDEQAPWSCFKQGGESAEKAAKDLVIILETMRIIAIALSPITPSLSLRIYTQLG 537

Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
           F  D+ R  +  D +   LK G ++ +   P+F R 
Sbjct: 538 FTEDQFRTLRWEDTKWGGLKAGQVMMEP-KPVFARI 572


>gi|259481569|tpe|CBF75211.1| TPA: methionyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_4G07820) [Aspergillus nidulans FGSC A4]
          Length = 569

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 183/494 (37%), Positives = 270/494 (54%), Gaps = 27/494 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PH+GH Y M++AD+L R+  L G  +    TGTDEHG KI +AA  AG
Sbjct: 56  YVTTPIFYVNAAPHVGHLYTMVLADILKRWRTLTGDNEAQLLTGTDEHGMKIQQAANAAG 115

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           + T+ F D+N   F+ +A+  ++ Y+ FIRTTE  H +  +  W+ +  +G IY   + G
Sbjct: 116 IDTQAFCDRNCLTFKALAEAANVDYNYFIRTTEPAHKEAVQYFWEMLQHRGYIYTSKHEG 175

Query: 127 WYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE +Y   +V        G            V+W  E  Y FRLSA+QD+LL  Y
Sbjct: 176 WYSVSDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLLELY 235

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
           ++  +FI P     +V+  V SGL DLS+SR  +   WGI +P+D    +YVW+DAL NY
Sbjct: 236 KT--DFITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDALVNY 293

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  H     
Sbjct: 294 LTKAGYPFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHAHWTM 353

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNV++P   I+  G+D +R+FL        D  YD   + +     L  G+
Sbjct: 354 NREKMSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQQGL 413

Query: 359 GNLVSRSVSMI---LKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           GN+  R++      L+DY      G  P     T  D++      ++  ++ + M+    
Sbjct: 414 GNIAHRTIGCAKGKLRDYIINATSGNSPA----TADDQAYQKTLEQLSHKVAKCMEALDP 469

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             AL +++ ++   ++YF   +PW+    NP+    V++   E +R + ILLQ F+P  A
Sbjct: 470 RAALEEIVEVILLTNKYFHNSEPWQ----NPEEKQRVIFNAAESMRIMGILLQPFMPNKA 525

Query: 471 NKIFDILFVADENR 484
            K+ DIL V    R
Sbjct: 526 KKLLDILKVDPSKR 539


>gi|261839774|gb|ACX99539.1| methionyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 653

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D     F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472


>gi|308183143|ref|YP_003927270.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065328|gb|ADO07220.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 653

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 291/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKTHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|309806717|ref|ZP_07700712.1| methionine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166897|gb|EFO69081.1| methionine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 608

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 180/465 (38%), Positives = 284/465 (61%), Gaps = 12/465 (2%)

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
           K++K A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +
Sbjct: 6   KLSKKAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQ 65

Query: 117 GDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLS 170
           GDIY G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S
Sbjct: 66  GDIYLGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMS 125

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
            Y D+LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++Y
Sbjct: 126 KYADRLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVY 185

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VWIDAL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+
Sbjct: 186 VWIDALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQ 245

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F HG++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +R
Sbjct: 246 IFGHGWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVER 305

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           VN DLAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M   
Sbjct: 306 VNFDLANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDAL 365

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVP 467
              +AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + 
Sbjct: 366 HFSKALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMT 425

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
           +    IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 426 QSPVHIFEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 469


>gi|145257023|ref|XP_001401591.1| methionyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134058501|emb|CAL00710.1| unnamed protein product [Aspergillus niger]
          Length = 575

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 186/490 (37%), Positives = 275/490 (56%), Gaps = 20/490 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M++ADV+ R+  L G  D    TGTDEHG KI +AA
Sbjct: 54  KKPYYVTTPIFYVNAAPHVGHLYTMVLADVIKRWRTLIGDADAQLLTGTDEHGMKIQQAA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             A + T+ F D N + F  +A+  ++ Y+ FIRTTE  H +  +  W+ +  +G +Y  
Sbjct: 114 LAAEMDTQAFCDMNYKTFEALANAANMDYNYFIRTTEPAHKEAVQYFWEVLEHRGYVYTA 173

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V K  D +  + +         V+W  E  Y FRLSA+Q++L
Sbjct: 174 KHEGWYSVSDETFYPQTQVQKSLDPETGHTKMVSIETGKEVEWSSETNYHFRLSAFQERL 233

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L  Y++   FI P      V+  V  GL+DLS+SR  +   WGI +P D    +YVW+DA
Sbjct: 234 LDLYKT--GFITPTMYTTNVVKSVSEGLQDLSISRPAERLTWGIPVPGDNTQTVYVWLDA 291

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  HG
Sbjct: 292 LVNYLTKAGYPFAPGQGSHLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHG 351

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS GNV++P   I   GVD++R+FL+ + A   D  YD   + +     L
Sbjct: 352 HWTMNREKMSKSTGNVVNPFFAINRFGVDSMRFFLIHQGALVGDADYDNAYIIRDYQKLL 411

Query: 355 ANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             G+GNL  R++      L+ Y  +G        T +DE+  ++   V + I E M+N  
Sbjct: 412 QKGLGNLAHRAIGCAKGNLRTYIENGTCGRLPPATPADEAYETMLKDVPKRIAEQMENLN 471

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL ++ +L+ + ++YF   +PW   K+  DR  ++  V  E +R   ILLQ  +P  
Sbjct: 472 PRAALQEITTLIDQTNKYFHHAEPW---KSPNDRQRSIFNV-AESLRMAGILLQPVMPTK 527

Query: 470 ANKIFDILFV 479
           AN++ D+  V
Sbjct: 528 ANELLDMFHV 537


>gi|308062316|gb|ADO04204.1| methionyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 653

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 289/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  +K + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFKIMFEKGDIYKGVY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRL+AY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLNAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D     F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|217034348|ref|ZP_03439764.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
 gi|216943233|gb|EEC22700.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
          Length = 645

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D     F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMVHFACAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITVYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|317014423|gb|ADU81859.1| methionyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 650

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 291/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAMKL 472


>gi|308184777|ref|YP_003928910.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060697|gb|ADO02593.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 650

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 199/517 (38%), Positives = 309/517 (59%), Gaps = 20/517 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-------QLIHRAL 414
           ++R + M  K ++        ++   + I +   + L+++ + + N         +H+AL
Sbjct: 361 LNRLLGMAKKYFN--------YSLKSDKITAYYPKELEKVHQILDNANSFVPKMQLHKAL 412

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++ ++   +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 413 EELFNVYDFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                V      ++   +  K   M+ +  +P+F + 
Sbjct: 473 ASAFCVEITPNNYERFFKAKKLQDMILQDTEPLFSKM 509


>gi|158523214|ref|YP_001531084.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158512040|gb|ABW69007.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 640

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 189/467 (40%), Positives = 264/467 (56%), Gaps = 12/467 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  I+ADV ARFH + G  V F TGTDEHG KI KAA   G
Sbjct: 5   FYITTPIYYVNAKPHLGHAYTTIMADVAARFHAMAGKKVFFLTGTDEHGDKIMKAAAARG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ K + D  S  FRD+   LDI Y  FIRTT++ H      +   I + GDIY   Y G
Sbjct: 65  VSPKAYADTISALFRDLWTELDIGYSHFIRTTDENHKQVVSRVLAAIYEAGDIYFSEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y + E+  G    +      P + ++E  YFF++S YQ  L+ +   +P+F
Sbjct: 125 LYCFGCERFYTERELVNGKCPDH----DTPPERIQEANYFFKMSKYQQWLIDHITDNPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   R E++SF+K  L DL +SR T   DWGI +P D +Y+ YVW DAL NY++  GY
Sbjct: 181 IRPEGYRTEILSFLKEPLDDLCISRPTSRLDWGIPLPFDDRYVTYVWFDALLNYVSALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D     FWPA  H+  KDI++ H IYWP  L +A +PL   +  HGF   +  K+S
Sbjct: 241 PD--DDRYMTFWPAVQHLTAKDIIKPHGIYWPIMLKAAGIPLYNHLNVHGFWQIESCKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV++P+++    G DA RYFL RE++ G D  + ++ L +R+NADLAN +GNL SR
Sbjct: 299 KSLGNVVNPLDMKNTYGTDAFRYFLCREMSFGLDAGFSEEALVQRINADLANDLGNLFSR 358

Query: 365 SVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++M  K +   +P          D  I ++    +      M    ++RALA V  L+S
Sbjct: 359 VLAMTAKYFKNRVPAADDANLPPCDIDIGALARTTVAAYEAQMATFHMNRALAAVWDLIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            ++R+ D   PW L K     D  + V+Y  +E +R +A L+   +P
Sbjct: 419 AMNRFIDYSAPWTLAKDPAKADALAAVIYTLLEGLRIVAGLVYPVMP 465


>gi|189485353|ref|YP_001956294.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287312|dbj|BAG13833.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 512

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 193/477 (40%), Positives = 284/477 (59%), Gaps = 15/477 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGH+Y  I +D++AR+ RL G DV F TGTDEHG KI  AA+  
Sbjct: 2   KFYITTPIYYANDIPHIGHSYTTIASDIMARWKRLKGFDVFFLTGTDEHGAKIVAAAKKK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   +   D+ S  F++  ++L+ISY DFIRTTE++H  +   +   + DKG I+K  Y 
Sbjct: 62  GEIPQKLCDKMSAKFKEAWELLNISYTDFIRTTERKHFVSVEKILSILFDKGFIFKKKYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-----SYY 180
             Y +  E +Y   ++ +     ++  +  PV    EE YFFRLS++Q+ L+     + +
Sbjct: 122 ELYCIGCERFYAQKDLDENGCCPFHKTK--PVL-QSEENYFFRLSSFQNALIDRIVDANH 178

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             H E I P ERRNE+I  +K GL+D+S SR   +WGI +P D     YVW+DAL NY+T
Sbjct: 179 REHIE-IQPEERRNEIIGKLKLGLEDVSFSRSAVEWGIPLPFDGGQTAYVWVDALINYIT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +N +    K+WPAD+H++ KDIL FH++ WPA L+ A LPLPKK++SHGF    G
Sbjct: 238 GVGYQEN-ETKFQKYWPADIHLMAKDILWFHSVIWPAILMGAGLPLPKKLYSHGFFTLNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+ P E++++ GVDA RY     I  G DG      L  + N DLAN +GN
Sbjct: 297 NKMSKSLGNVVSPRELVDKYGVDAARYLAATIIPFGPDGDISWQRLTLKYNTDLANNLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L+SR++ M  K ++  +P     T  D E +  V + + ++   NM N   H+A   + S
Sbjct: 357 LISRTLKMAEKYFNLYVPQ----TIPDLELVRKVVTVLKKKFALNMDNMQFHKAAETLQS 412

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++ V+R  +   PW+L KT+ D+ ++ +Y  ++    + + L  F+P +A KI+ I
Sbjct: 413 AITLVNRQIEIDAPWKLAKTDTDKLASCIYAYLQSADIIIMHLLPFMPTMAEKIWQI 469


>gi|242036539|ref|XP_002465664.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
 gi|241919518|gb|EER92662.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
          Length = 597

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 196/527 (37%), Positives = 298/527 (56%), Gaps = 36/527 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++T + Y NA PH+G AY  I AD +ARF RL   +V+F TGTDEHG+KIA +A+ 
Sbjct: 59  EPYVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLQEKNVIFITGTDEHGEKIAASAEA 118

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           +G   K   D  S +++ +   LDI YD FIRTT+ +H       + ++ + GDIY+  Y
Sbjct: 119 SGRNPKEHCDAISSSYKTLWADLDIEYDKFIRTTDSKHEAVVNEFYSRVLNSGDIYRADY 178

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ KL      +P
Sbjct: 179 EGLYCVSCEEYKDEKELL---ENNCCPVHLKPCVERKEDNYFFALSKYQHKLEELLTRNP 235

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  R NEV  ++KSGL+D S+SR + +WGI +P+D +  +YVW DAL  Y++    
Sbjct: 236 DFVRPSYRLNEVQGWIKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISA--L 293

Query: 245 LDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           LD  DG +A         WPA LH+IGKDILRFHA+YWPA L+SA L +P  VF HGF+ 
Sbjct: 294 LD--DGEQASLQQAVDHGWPASLHLIGKDILRFHAVYWPAMLMSAGLTVPDTVFGHGFLT 351

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN ++P +++E  G DA+RYF +RE+  G DG Y ++     VNA LAN 
Sbjct: 352 KDGMKMGKSLGNTLEPKDLVERFGADAVRYFFLREVEFGNDGDYSEERFINIVNAHLANT 411

Query: 358 IGNLVSRSVSMILKD------YDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
           IGNL++R++ ++ K+      +D +    G  F ++ E++       + + + + +N L+
Sbjct: 412 IGNLLNRTLGLLKKNCKSKLAFDSIAAADGGLFRDNIENL-------VDKAKHHYENLLL 464

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVP 467
             A   V+ + +  + Y D Q PW   K    + ++A+  L + +E +R +AI L    P
Sbjct: 465 SSACETVLEIGNLGNLYIDEQAPWSCFKQGGESAEKAAKDLVLILETMRIIAIALSPITP 524

Query: 468 KLANKIFDIL-FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
            L+ +I+  L F  D+ R  +  D +   LK G ++ +   P+F R 
Sbjct: 525 SLSLRIYTQLGFTEDQFRLLRWEDTKWGGLKAGQVMSEP-KPVFARI 570


>gi|294054396|ref|YP_003548054.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613729|gb|ADE53884.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 511

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 190/520 (36%), Positives = 302/520 (58%), Gaps = 30/520 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+TAI Y N  PH+GHAYE ++ D++AR+ RL G +V F TG DEHGQK+  +AQ 
Sbjct: 3   KKFYITTAIDYANGSPHLGHAYEKVLTDIVARYRRLMGDEVKFLTGLDEHGQKVQMSAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   D+ +  F+ +   L IS DD+IRTT+ RH    + + + + DKG+IYK  Y
Sbjct: 63  EGIAPQEICDRLAVEFQGVCGRLHISNDDYIRTTQARHKKVVQEILQTLYDKGEIYKAEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+YS R E +  + E   G   + +      V+ + E  YFF+L+ YQ+ L+ + +S+ 
Sbjct: 123 SGYYSQRQEQFVTEKEKVNGEWPEIFGE----VEEVIETNYFFKLAQYQEWLVDFIQSNE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           + I P  R  +V+ F+K  L DL +SR     +WGI++P D  ++ YVW DALTNY+T  
Sbjct: 179 DLIYPRFRSADVLQFLKEPLNDLCISRPKSRLEWGIELPFDTDFVTYVWFDALTNYITAA 238

Query: 243 GYLDNPDGSK--AKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY     G++  A+ WPAD HVIGKDIL   HA+YWP  L + ++ LPK    HG+ L  
Sbjct: 239 GY-----GTEEFAQHWPADYHVIGKDILVPPHAVYWPIMLKALDIELPKHFLVHGWWLSS 293

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS G+V++P+++IE+ G DA RYF+ RE+  G+D  +  D    R N+DLAN +G
Sbjct: 294 GAKMSKSTGDVVNPLDLIEQFGADAFRYFVTREMNVGQDSEFSLDLFMSRYNSDLANDLG 353

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR ++M  +  +  +P        ++ +  +      E++   ++   H+AL ++  
Sbjct: 354 NLVSRLLNMGGRYTEAKVPAASVNEAPEQELKKLWEATKDELQPLFESFQFHKALERIFG 413

Query: 420 LVSEVDRYFDAQKPWELKKTNP--DRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +S +++Y + + PW+L K+    DRA   T L    E +R   ++L   +P +++++  
Sbjct: 414 FISGINKYAETRAPWKLAKSEAPEDRARLETSLAYMAEALRLGVVMLTPVMPDISDRVRA 473

Query: 476 ILFVADENRCFQSLDQRLKPGFML------HKTFDPIFPR 509
           ++   +    F+ +D +L+ G  L       KT   +FPR
Sbjct: 474 LIGATN----FERIDGQLEWGETLAGQALGEKTI--LFPR 507


>gi|148242327|ref|YP_001227484.1| methionyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147850637|emb|CAK28131.1| Methionyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 510

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 185/474 (39%), Positives = 262/474 (55%), Gaps = 10/474 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PHIG  Y  +  D LARF RL G +V+F TG DEHGQKI + A++AG+ 
Sbjct: 5   LTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAESAGID 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   DQ S  F  +     IS D FIRTT+ RH       + ++   GDI +G   GWY
Sbjct: 65  PQQHCDQISSTFASVWSQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D    K A   +      P++W +E   FFRLS YQD +     +   FI 
Sbjct: 125 CVACEEYKDDP---KEAQSPHCPIHQKPLEWRDEANLFFRLSRYQDAIEKLIATE-GFIR 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR EV +FV +GL+D S+SR+   WG+ +P    +  YVW DAL  Y+T     D P
Sbjct: 181 PASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP 240

Query: 249 ---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D + +  WPA LHVIGKDILRFHA+YWPA  LSA + LP  VF HGF+  +G+K+ K
Sbjct: 241 ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN IDP  ++E  G DA+R++L+R+I  G DG   +  L   VN DLAN IGNLV+RS
Sbjct: 301 SMGNSIDPTRLVELCGRDAVRWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRS 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM  K ++G+   P     S+  +       + ++  + Q    H    Q + L    +
Sbjct: 361 ISMARKWFEGVPSLPQELP-SNHPLKQAAQAAVADVASHYQELRFHAVAEQALQLAIAAN 419

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y   Q PW+  K   N D+ +  LY  +E  R + ++LQ  +P+ + ++   L
Sbjct: 420 GYLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQL 473


>gi|330799736|ref|XP_003287898.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
 gi|325082101|gb|EGC35595.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
          Length = 566

 Score =  346 bits (887), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 184/516 (35%), Positives = 282/516 (54%), Gaps = 36/516 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K+ I+T I Y N  PHIGH Y  ++ D  AR++R  G D  F TGTDEHG K+ +AA+
Sbjct: 33  KKKILITTPIFYVNGPPHIGHLYTALLGDAFARWNRFKGNDTYFMTGTDEHGMKVDEAAK 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+ T  + D  S  F+++  + +I YDDFIRTTE RH D    +W ++ +KG IYKG 
Sbjct: 93  KKGLKTIDYCDSISNRFKELFKLSEIQYDDFIRTTEPRHRDAVTAMWNRLLEKGYIYKGV 152

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRL 169
           Y GWY   DE++  DD+V +G      N   NPV               W+EEE Y F+L
Sbjct: 153 YKGWYCTSDESFLTDDQVMEGMSPITPN---NPVSKKCMVSKESGHEVTWVEEENYMFKL 209

Query: 170 SAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQY 226
           S +  K+ ++ +  +P  I P     ++++ +  G++DLS+SR +    WGI +P+DP  
Sbjct: 210 SEFASKVENWIQDLNP--IFPATHTKQLLAMISQGVRDLSISRPSSRITWGIPVPNDPSQ 267

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
            +YVW+DALTNYLT TGY        + +W    H+IGKDI++FH +YWP+FL++A  P+
Sbjct: 268 TIYVWLDALTNYLTVTGYPKVDPNDPSSYWSNTHHIIGKDIIKFHCLYWPSFLMAAEYPV 327

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            K V  H       EK+SKS GNV+DP E I+  G++ +RYFL++      DG +    +
Sbjct: 328 QKGVLCHAHWTVNREKMSKSRGNVVDPFESIQNYGLEVIRYFLLKGGGLEDDGDWSDHEI 387

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP-------TPGAFTESDESILSVCSRVLQ 399
             R+ ADLA+  GNL+SR     L    G  P       +    TE D  +L+ C +++ 
Sbjct: 388 SVRLKADLADTYGNLLSRCTGKPLHP-SGHWPKSVNLDESSTLLTEKDIQLLNHCKKLIN 446

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK------KTNPDRASTVLYVTVE 453
               N         + ++++ + + + Y   QKPW L         +P R +T++Y+ +E
Sbjct: 447 GATVNFDKGDFKNGIYEILAFLYDCNGYIQEQKPWTLAPKPNRPNADPVRLNTIMYIALE 506

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +IR  ++LL   +P  A    + L +  + R  Q+L
Sbjct: 507 MIRIASLLLLPVIPSSATLALNQLDIPLDQRNHQNL 542


>gi|72382182|ref|YP_291537.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002032|gb|AAZ57834.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 516

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 188/490 (38%), Positives = 287/490 (58%), Gaps = 16/490 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+T + Y N +PH+G +Y  I  D +ARF RL+G  VLF TG DEHGQKI + A++ 
Sbjct: 4   KYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  ++  D+ +  ++ + D L+ISYD F+RTT   H       + K+    D+Y G  S
Sbjct: 64  NLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y + ++  K      +  +   ++W +EE  FF+LS YQD++         
Sbjct: 124 GWYCVGCEEYKDVEDKDKSPICSIHKKE---LEWRDEENLFFKLSKYQDQIEKLIHVDG- 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NE+I+FV  GL+D S+SR    WGI +P +  +  YVW DAL  Y++  G L
Sbjct: 180 FISPKSRKNEIINFVSKGLRDFSISRVNLKWGINVPGNKDHTFYVWFDALLGYVS--GSL 237

Query: 246 DN---PDGSKAKF--WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           ++   P+ ++     WPA++HVIGKDILRFHA+YWPA LLSA +  P+ VF HGF+  +G
Sbjct: 238 NDQCSPELTEKSLSNWPANIHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREG 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+ KSLGNV+DPIE++E  G+DA+R++L+R+I  G+DG +        VN+DL N IGN
Sbjct: 298 QKMGKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVIS 419
           L++R+++M  K +   IP     T S +S L V S   + E  E+ ++     +   +I 
Sbjct: 358 LLNRTITMSKKWFKENIPIDN--TLSSDSTLKVKSETKIIEYMESFKDSNFKSSANAIID 415

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  + Y + + PW+L K  +N +  +  +Y  +E  R + ILL   VP L+N+I   L
Sbjct: 416 LANSANLYLNDRAPWKLIKDISNKNIVALDIYSVLESCRIIGILLNPIVPNLSNRILKQL 475

Query: 478 FVADENRCFQ 487
            +   N  F+
Sbjct: 476 NIDTSNINFK 485


>gi|115451471|ref|NP_001049336.1| Os03g0209600 [Oryza sativa Japonica Group]
 gi|108706784|gb|ABF94579.1| Methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113547807|dbj|BAF11250.1| Os03g0209600 [Oryza sativa Japonica Group]
 gi|215697057|dbj|BAG91051.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222624429|gb|EEE58561.1| hypothetical protein OsJ_09866 [Oryza sativa Japonica Group]
          Length = 602

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 191/516 (37%), Positives = 290/516 (56%), Gaps = 22/516 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y NA PH+G AY  I AD +ARF RL    V+F TGTDEHG+KIA +A+  G  
Sbjct: 65  LTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEACGRN 124

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D  S +++ +   LDI YD FIRTT+++H       + ++ D GDIY+  Y G Y
Sbjct: 125 PKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADYEGLY 184

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y ++ E+    + +       P    +E+ YFF LS YQ +L      +P F+ 
Sbjct: 185 CVSCEEYKDEKEL---GENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNFVR 241

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  R NEV  +VKSGL+D S+SR + +WGI +P+D +  +YVW DAL  Y++    LD  
Sbjct: 242 PSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYIS--ALLD-- 297

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG KA         WPA LH+IGKDILRFHA+YWPA L+SA + +P  VF HGF+   G 
Sbjct: 298 DGEKASLQQAVERGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGM 357

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN ++P +++   GVD++RYF +RE+  G DG Y ++     VNA LAN IGNL
Sbjct: 358 KMGKSLGNTLEPKDLVNRFGVDSVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNL 417

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+    +           S+      ++ + ++  +N L+  A   ++ + 
Sbjct: 418 LNRTLGLLKKNCKSTLAFDSIAAADGISLKDNVENLVDKAKDQFENLLLSSACETLMEIG 477

Query: 422 SEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL- 477
           +  + Y D Q PW   K    + ++A+  L + +E +R +AI L    P L+ +I+  L 
Sbjct: 478 NLGNLYIDEQAPWSCFKQGGESAEKAAKDLVIILETMRIIAIALSPITPSLSLRIYTQLG 537

Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
           F  D+ R  +  D +   LK G ++ +   P+F R 
Sbjct: 538 FTEDQFRTLRWEDTKWGGLKAGQVMMEP-KPVFARI 572


>gi|82245502|sp|Q90YI3|SYMM_TAKRU RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|15020809|emb|CAC44631.1| putative methionyl tRNA synthetase [Takifugu rubripes]
          Length = 590

 Score =  346 bits (887), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 189/507 (37%), Positives = 280/507 (55%), Gaps = 23/507 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E    YI+T I Y NA PH+GH Y  +IAD   R  +L G +  F TGTDEHG KI +AA
Sbjct: 40  ENRNYYITTPIFYVNASPHLGHLYSAVIADCFHRHKQLQGFNSRFATGTDEHGLKIQQAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG     F    S  FR +    +IS  D+IRTTE+RHH   +  W  +  KG IYKG
Sbjct: 100 EAAGKEPLEFCTTVSERFRHLFSSCNISNTDYIRTTEQRHHRAVQHFWSVLCSKGLIYKG 159

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWYS +DE++    +V    D      +      + V+WM+EE Y FRLS ++ +LL
Sbjct: 160 SYEGWYSTQDESFLTPSQVTTALDSTGKEIKVSLESGHKVEWMKEENYMFRLSGFRSQLL 219

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P  I P    + V+ +++  L DLS+SR+     WGI +P+D    +YVW+DAL
Sbjct: 220 DWLRENPRAIQPERFHHSVLQWLQEELPDLSVSRQKSRLQWGIPVPEDDGQTIYVWLDAL 279

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +N +    ++W    H+IGKDIL+FHAIYWP+FLL A LPLP+ +  H  
Sbjct: 280 VNYLTVVGYPNNHE----RWWNVAHHIIGKDILKFHAIYWPSFLLGAGLPLPQTIHVHSH 335

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNVIDP E  +    D LRYFL+R+     D  Y  D + K +NA+LA
Sbjct: 336 WTVAGKKMSKSLGNVIDPQERSQLFTTDGLRYFLLRQGVPDTDCDYRDDKVVKLLNAELA 395

Query: 356 NGIGNLVSRSVSMILKD---YDGMIPTP------GAFTESDESILSVCSRVLQEIRENMQ 406
           + +G L++R  +  L     Y    P        G   + D  +L     +   + ++ +
Sbjct: 396 DALGGLLNRCTATALNPAQVYASFCPDSFPRERGGRADDDDYRMLESVRHLPAVVEQHFE 455

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA--STVLYVTVEVIRQLAILLQ 463
           +  +++AL  V + V + + +     PW+L +K + D+    T+++V++E +R    LLQ
Sbjct: 456 DMHVYKALEAVSTCVRQTNGFVQRHAPWKLDRKDSADQRWLGTIIHVSLECLRIYGTLLQ 515

Query: 464 AFVPKLANKIFDILFVADENRCFQSLD 490
             VP+++NK+   L V    R + +L+
Sbjct: 516 PVVPEISNKLLSRLGVQPHERSWTNLN 542


>gi|124025722|ref|YP_001014838.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123960790|gb|ABM75573.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 516

 Score =  345 bits (886), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 188/490 (38%), Positives = 286/490 (58%), Gaps = 16/490 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+T + Y N +PH+G +Y  I  D +ARF RL+G  VLF TG DEHGQKI + A++ 
Sbjct: 4   KYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  ++  D+ +  ++ + D L+ISYD F+RTT   H       + K+    D+Y G  S
Sbjct: 64  NLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y + ++  K      +  +   ++W +EE  FF+LS YQD++         
Sbjct: 124 GWYCVGCEEYKDVEDKDKSPICSIHKKE---LEWRDEENLFFKLSKYQDQIEKLINVDG- 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NE+I+FV  GL+D S+SR    WGIK+P +  +  YVW DAL  Y++  G L
Sbjct: 180 FISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVS--GSL 237

Query: 246 DN---PDGSKAKF--WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           ++   P+ ++     WPA+ HVIGKDILRFHA+YWPA LLSA +  P+ VF HGF+  +G
Sbjct: 238 NDQCSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREG 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+ KSLGNV+DPIE++E  G+DA+R++L+R+I  G+DG +        VN+DL N IGN
Sbjct: 298 QKMGKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVIS 419
           L++R+++M  K +   IP     T S +S L V S   + E  E+ ++     +   +I 
Sbjct: 358 LLNRTITMSKKWFKENIPIDN--TASSDSTLKVQSETKIIEYMESFKDSNFKSSANAIID 415

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  + Y + + PW+L K  +N +  +  +Y  +E  R + ILL   VP L+ +I   L
Sbjct: 416 LANSANLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQL 475

Query: 478 FVADENRCFQ 487
            +   N  F+
Sbjct: 476 NIDTSNINFK 485


>gi|241842777|ref|XP_002415428.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509640|gb|EEC19093.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 522

 Score =  345 bits (886), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 189/509 (37%), Positives = 300/509 (58%), Gaps = 27/509 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQ 63
           + +I+T I Y NA PH+GH + +++AD L R HRL       +F+TGTDEHG KI +AA 
Sbjct: 5   RYFITTPIFYVNAGPHLGHHHTVVLADSLHRLHRLLAPSSPTIFSTGTDEHGLKIQQAAS 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A      F ++ S+ F+D+ D   I+Y D++RTTE+RH    R  W+ +  K  IY G 
Sbjct: 65  KAKQDELSFCNRISKQFKDLFDSTSITYTDYVRTTEERHKACVRHFWEVLQKKEHIYTGT 124

Query: 124 YSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y GWYS ++E + +D E+ +     G   +      +PV+WMEE+ Y FRLS +QD L+ 
Sbjct: 125 YKGWYSTQEELFLSDSEIKEVPKEDGTPQKVSIESGHPVEWMEEKNYVFRLSRFQDDLIH 184

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
           + +S P  + P + ++ ++ ++++GL+DLS+SR++    WGI +P D    +YVW+DAL 
Sbjct: 185 WLKS-PGVVKPAKFQDLLVHWIRAGLQDLSVSRQSSRVKWGIMVPGDETQTIYVWLDALV 243

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT +GY   P+ S    WP D HVIGKDIL+FH IYWPAFL++A L  P+ +  H   
Sbjct: 244 NYLTVSGY-PGPNHS----WPPDCHVIGKDILKFHGIYWPAFLIAAGLEPPRSILCHSHW 298

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
               EK+SKS GNV+ P++ +++   D +RYFL+RE     DG ++   +++ +NA+LA+
Sbjct: 299 TVNNEKMSKSKGNVLCPVKKVDKYTADGIRYFLLREGVPHSDGNFNSVKVQRLLNAELAD 358

Query: 357 GIGNLVSRSVSMILKDYDGMIPT--PGAFTE--SDESILSVCSRVLQEIRENMQNQLIHR 412
            +GNL+SR  + ++ +   + P     +F E    + +L     +  +++       I++
Sbjct: 359 TLGNLLSRCTAPLV-NKQQIFPAYNSKSFEELPDGQKVLVELQGLPDKVKARYLEGNIYQ 417

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKL 469
            L +V+ ++   +      KPWEL K+ PD   R   VL++ +EV+R  AI+LQ  +P L
Sbjct: 418 GLDEVMHVLRRTNAVVQDAKPWELAKS-PDAGHRLDAVLHMALEVLRVSAIVLQPVIPVL 476

Query: 470 ANKIFDILFVADENR---CFQSLDQRLKP 495
           + +I D L V  + R   C ++ D R +P
Sbjct: 477 STRILDKLQVGGDERTWSCAETPDVRQRP 505


>gi|217032293|ref|ZP_03437790.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
 gi|298735963|ref|YP_003728488.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946059|gb|EEC24672.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
 gi|298355152|emb|CBI66024.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 650

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 192/473 (40%), Positives = 291/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +    +D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTSDKVLCPDCLRETALLEEESYFFKLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++ D   A F     H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNDLDNKMAHF-ECTRHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKL 472


>gi|254779595|ref|YP_003057701.1| methionyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001507|emb|CAX29525.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Helicobacter pylori B38]
          Length = 650

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKL 472


>gi|317009649|gb|ADU80229.1| methionyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 650

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 197/510 (38%), Positives = 304/510 (59%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +    +D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTSDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAIEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+ +     
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLANAFNTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLFSKM 509


>gi|320352452|ref|YP_004193791.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320120954|gb|ADW16500.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 648

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 202/499 (40%), Positives = 290/499 (58%), Gaps = 16/499 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y NA PH+GHAY  I+ D  +RF RL G  V F TGTDEHG+KIA+AA  AG 
Sbjct: 4   YVTTPIYYVNALPHLGHAYTTIVTDTYSRFRRLCGDTVRFQTGTDEHGEKIAEAAAKAGE 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + + +VD+ S  F+D   VL I  D  IRTT+  H  T + + +++   GDIY   YSG 
Sbjct: 64  SPREYVDRISAAFKDTWPVLAIQPDKIIRTTDADHVRTVQAILQQVHASGDIYFSEYSGL 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E +  + E+    DG+  +    P + + E+ YFFR+S YQD L+ + + HP+FI
Sbjct: 124 YCKGCERFLTEKEL---VDGKCPDHLVEP-KAITEQNYFFRMSKYQDWLIEHIQRHPDFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            P   RNEV+SF+   L+DL +SR T    WGI +P D  ++ YVW DAL NYLT  GY 
Sbjct: 180 TPERYRNEVLSFLSEPLEDLCISRPTSRLTWGIPLPFDQNFVTYVWFDALINYLTGIGYP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D+P+   A +W    HVI KDIL+ HAIYWP  L +  L   +++  HG+      K+SK
Sbjct: 240 DSPE--FAMYWAEAEHVIAKDILKPHAIYWPTMLRAMGLEPYRRLHVHGYWNVDATKMSK 297

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+ P E++E  GVD +RYF++RE++ G D  +  D +  R NADLAN +GNL SRS
Sbjct: 298 SLGNVVRPRELVETYGVDTVRYFVLREMSFGLDSSFSSDAILARHNADLANDLGNLFSRS 357

Query: 366 VSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           ++MI K   G +P P     F   D  ++S  + +    +ENM     H+AL  +  ++ 
Sbjct: 358 LTMIDKYAAGRVPEPETAALFAPEDRELMSAIAAMFDHYQENMAAFTFHKALQAIWEVIG 417

Query: 423 EVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++RY     PWEL K  PD+A    TVL    E + ++A++L   +P  A+++   L +
Sbjct: 418 LLNRYIVTHAPWELAK-QPDQAGRLRTVLAFLAESLWKIALVLGPIMPDTASRMAAALGM 476

Query: 480 ADENRCFQSLDQRLKPGFM 498
             E     +LD+  K G++
Sbjct: 477 GTEFASV-TLDEARKWGYI 494


>gi|321468691|gb|EFX79675.1| hypothetical protein DAPPUDRAFT_319387 [Daphnia pulex]
          Length = 558

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 195/495 (39%), Positives = 274/495 (55%), Gaps = 18/495 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKA 61
           + E  +I+T I Y NA+PHIGH Y  ++AD  ARFHRL G   V+F+TGTDEHG KI +A
Sbjct: 39  KNEPYFITTPIFYVNAEPHIGHVYTAVLADSSARFHRLIGCSPVVFSTGTDEHGLKIQQA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  A      F DQ S  F++  D  +I Y D+IRTTE RH +     W  +SDKG IYK
Sbjct: 99  SLQANKDPSQFCDQVSVLFKNALDECEIGYTDYIRTTENRHKENVHSFWNILSDKGYIYK 158

Query: 122 GCYSGWYSLRDEAYYNDDE--VYKGADG--QYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176
           G Y GWY   DE +  +D+  + K  DG  Q  + + N PV+W  EE Y F+LS  + +L
Sbjct: 159 GKYEGWYCTADETFVTEDQTTLLKLPDGREQRVSTESNRPVEWFSEENYLFKLSKLRGEL 218

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L +  S P  + P+   N V S+++  L DLS+SR      WGI +P+DP   +YVW+DA
Sbjct: 219 LKWLISGP-VVRPVRHYNLVKSWLEQDLVDLSVSRPRARLSWGIPVPEDPSQTIYVWLDA 277

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY+T   +      S    WP  +HVIGKDIL+FH+IYWPAFLL+A    PK +  HG
Sbjct: 278 LLNYMTVAKH----SHSDKNIWPPSVHVIGKDILKFHSIYWPAFLLAAGFDPPKCLLVHG 333

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
             L   +K+SK+ GNV+ P   I+      LRYFL+ E     DG +    L +  N++L
Sbjct: 334 HWLADDQKMSKTTGNVVSPQSCIDIATATGLRYFLLHEGVPASDGNFSMTKLVRIANSNL 393

Query: 355 ANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDE---SILSVCSRVLQEIRENMQNQLI 410
           A+GIGNLV+R     L      +  +P  F         +L +  R    + E       
Sbjct: 394 ADGIGNLVNRCCGKNLNPSQIRLAVSPSDFEACGSPGLELLDLLQRTPDIVYEEYLQWNF 453

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           ++ + Q+++LV   + +F   +PW+LKK    D+ +  L +T+E  R +  LLQ  VP  
Sbjct: 454 YKGIDQIMALVRGANGFFQTMEPWKLKKEGKIDKLNASLAITMETARVVGTLLQPIVPSY 513

Query: 470 ANKIFDILFVADENR 484
           + ++ D L V  ENR
Sbjct: 514 SERLLDKLGVPRENR 528


>gi|237751267|ref|ZP_04581747.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372633|gb|EEO23024.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 663

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/536 (38%), Positives = 299/536 (55%), Gaps = 45/536 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  ++T I Y N  PHIGHAY  I+ADV+ ++  L G DV F TGTDEHGQKI +AA+  
Sbjct: 2   KKLLTTPIYYVNDVPHIGHAYTTILADVMKKYWTLRGNDVFFLTGTDEHGQKIEEAAKKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+ T  + +  S  FRD     DI YD FIRTT   H  + +  ++ + D+GDIYKG Y 
Sbjct: 62  GIKTIEYANSISEKFRDTWREYDIDYDKFIRTTYFEHILSVQKAFEIMYDRGDIYKGAYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYY--NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           G Y +  E+++   +V    DG Y    +     + ++EE YFF LS YQDKLL++Y  +
Sbjct: 122 GMYCVGCESFFTQTQV---IDGIYCPDCSGKKETRLVKEESYFFALSKYQDKLLAWYREN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240
           P+ I+P  +RNEVI FV+ GL+DLS++R +F+WGIKIP    D ++I+YVW+DAL NY +
Sbjct: 179 PDCIVPSHKRNEVIKFVEQGLQDLSITRISFEWGIKIPLKLRDSKHIIYVWLDALMNYAS 238

Query: 241 TTGY-LD--------------NPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             GY LD              NP   SK +++    H++GKDILRFHAIYWPAFL+S +L
Sbjct: 239 ALGYGLDYNNAKEQLSYKMEQNPCLESKMEYFNNTTHIVGKDILRFHAIYWPAFLMSLDL 298

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           PLPK +  HG+    G K+SKS+GNVI P+++      D  RYFL+RE+  G+DG + + 
Sbjct: 299 PLPKHILVHGWWTIDGVKMSKSIGNVIHPLDIKNAYPTDIFRYFLLREVPFGQDGDFSQI 358

Query: 345 GLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCSR 396
            L  R N +L+N +GNL++R + M        + K YD       A+    E I    SR
Sbjct: 359 ALINRNNGELSNDLGNLLNRLIGMSEKYFQFDLSKSYD-----ENAYISQKEEI----SR 409

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVI 455
           ++ +    M +   H+ L  V  L    +       PWEL K          L +   ++
Sbjct: 410 IINQSLAYMDSMQPHKFLESVWELFYLANTMITQIAPWELMKQEKSIECKAFLNLIANIL 469

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
            + A+LL   +P    +I   L ++ +++ F +L   Q     FM+ K    +FP+
Sbjct: 470 AKAALLLYPILPNSCKEISKALNISIDSKQFDTLIIKQGYIQDFMIQKVC-VLFPK 524


>gi|126326777|ref|XP_001379390.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Monodelphis
           domestica]
          Length = 605

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/522 (36%), Positives = 283/522 (54%), Gaps = 39/522 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD----------VLFTTGTD 52
           E  ++  +T I Y NA PHIGH Y  ++AD LAR+ RL              V F+TGTD
Sbjct: 46  ESGRVCFTTPIFYVNAAPHIGHLYSALLADALARYCRLRAAAPPVTSPAAPLVRFSTGTD 105

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           EHG KI +AA  AG+T     D+ S  FR +     IS  DF+RTTE RH       W+ 
Sbjct: 106 EHGLKIQQAATAAGLTPSELCDRVSAQFRALFQEAGISITDFLRTTEARHRRAVHHFWEV 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNA---QHNPVQWMEEEGYFF 167
           +  +G +YKG Y GWY   +E +  D +V    G +GQ +       +PV WM+EE Y F
Sbjct: 166 LHARGLLYKGLYEGWYCASEECFLPDGKVTWRPGPNGQSHPVALDSGHPVCWMKEENYIF 225

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225
           RLS +++ L  + +  P+ I P   R+ V+ +++  L DLS+SR      WG+ +P DP 
Sbjct: 226 RLSQFREPLRQWLQDDPQAITPDPFRSTVLKWLEEDLPDLSVSRSNSHLYWGLPVPGDPT 285

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
             +YVW+DAL NYLT  GY   PD  +  +WPA  H+IGKDIL+FHAIYWPA LL A + 
Sbjct: 286 QTIYVWVDALVNYLTVIGY---PDSEQEAWWPATHHIIGKDILKFHAIYWPALLLGAGMT 342

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            P +++ H      G+K+SKSLGNV+DP+  +++  VD  RYFL+R+     D  Y +  
Sbjct: 343 PPHRIYVHSHWTVHGQKMSKSLGNVVDPLSCLDQFTVDGFRYFLLRQGVPNWDCDYYEKK 402

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---------------TPGAFTESDESI 390
           + K ++A+LA+ +G L++R  +  L    G+ P                P      D ++
Sbjct: 403 VVKLLDAELADALGGLLNRCTATSLNP-TGIFPVFSTSCFPSMEDIMAAPTKAQPEDYAL 461

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TV 447
           +   S +  ++    +N  I++AL  V + V + + +     PW+L + N   A    TV
Sbjct: 462 VKAVSALPLQVENYYENFQIYKALEAVSTCVRQTNGFVQRNAPWKLNRENLADAQWLDTV 521

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           L+VT+E +R   +LLQ   P LA+K+   L +++  R  Q++
Sbjct: 522 LHVTLECLRVFGLLLQPVTPALADKLLSRLGISETERGLQNI 563


>gi|226355830|ref|YP_002785570.1| methionine--tRNA ligase [Deinococcus deserti VCD115]
 gi|226317820|gb|ACO45816.1| putative Methionine--tRNA ligase (Methionyl-tRNA synthetase)
           (MetRS) [Deinococcus deserti VCD115]
          Length = 668

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 185/480 (38%), Positives = 278/480 (57%), Gaps = 11/480 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    + +++TAI Y N  PHIGH YE I+AD + R+ RL G +V F  GTDEHG+KI+K
Sbjct: 1   MTANNEFFLTTAIDYANGAPHIGHVYEKILADAIVRYQRLAGKNVTFVMGTDEHGEKISK 60

Query: 61  AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA   G+T +  VD  S R F+ + D L ISY +FIRTTE RH    + + +++ D GDI
Sbjct: 61  AAAKEGLTPQALVDDLSVRAFKGLWDRLGISYSEFIRTTEGRHKRFVQDVLQRVYDSGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y   Y G YS+  E Y  + E+ +G DG + +    +P +   E  YFFR+  YQ+ LL 
Sbjct: 121 YFAEYEGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFRMEKYQEWLLG 180

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236
           +   +P+ I P   RNEV+  +K  + DLS+SR      WG+++P D  ++ YVW DAL 
Sbjct: 181 HLRENPDLIQPSGYRNEVLEMLKEPIGDLSISRPKNRVPWGVELPWDADHVTYVWFDALL 240

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           +YLT        +      W    HVIGKDIL+ HA++WP  L +A +P+ +K+  H  I
Sbjct: 241 SYLTPLVTRGVDESVSGLAW----HVIGKDILKPHAVFWPTMLKAAGMPVYRKLVVHSHI 296

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           L + G K+ KSLGN IDP +++ +  VDA+RY ++RE     D  + +  L  R+N+DLA
Sbjct: 297 LAEDGRKMGKSLGNAIDPEKLVADYPVDAIRYAMLREATLSADSPFGEGILVSRLNSDLA 356

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNL+SR+VSMI K  +G+IP PG   + +  I +    +  E+   + +  ++ A+ 
Sbjct: 357 NDLGNLLSRTVSMIQKYREGVIPAPGQPADRERVIEAAAIALPGEVLRLVGDLKVNMAIE 416

Query: 416 QVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++ V +++RY     PW L K+     R  TVLY   E +R  ++ L+A +P  A ++
Sbjct: 417 AAMNFVRDLNRYIAESAPWNLAKSEETQGRLDTVLYTAAEGLRVASVCLEAVIPGKAREL 476


>gi|254443440|ref|ZP_05056916.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257748|gb|EDY82056.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 512

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 178/478 (37%), Positives = 280/478 (58%), Gaps = 14/478 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI Y N  PH+GHAYE ++ DV+ARF RL G +V F TG DEHGQK+ ++A   G
Sbjct: 4   FYITTAIDYANGSPHLGHAYEKVLTDVVARFRRLMGDEVYFLTGIDEHGQKVQQSAAKRG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +      D+ +  F+++ + L+IS DDFIRTTE RH D  R + + + D+G+IYK  Y G
Sbjct: 64  IEPIELCDEAAGQFQELCESLEISNDDFIRTTETRHKDVVRSILQDLFDRGEIYKAEYKG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YS R E +  + ++  G   + +      V  + E  YFF+LS YQD L+ + ++H +F
Sbjct: 124 FYSARAEQFLQEKDMVDGKWPEIFGE----VNEITESNYFFKLSKYQDWLVEHIKTHEDF 179

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P  R  +V+ F+K  + DL +SR  +  +WGI +P D +Y+ YVW DAL NY++  GY
Sbjct: 180 IFPRFRAKQVLEFLKEPINDLCISRPKERLEWGIPLPFDEEYVTYVWFDALVNYISAIGY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              PD    K+WP + HVIGKDIL   HA+YWP  L +  + +P  +  HG+    GEK+
Sbjct: 240 -GTPDFE--KYWPVNYHVIGKDILVPPHAVYWPIMLKAIGIEIPSSLLVHGWWSINGEKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN I+P E ++E  VDALRYFL+RE++ G+D  +  +    R N+DLAN +GNL++
Sbjct: 297 SKSTGNFIEPSEFVKEYSVDALRYFLIREMSVGQDSDFSDELFTNRYNSDLANDLGNLLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R ++M  +      P        +E + +  +   +++ E  +    H+ L    + + +
Sbjct: 357 RVLTMTPRYCGETFPARTVSEGPEEELEAAWAETEKKVVELYEEFQFHKGLELTFNFIRQ 416

Query: 424 VDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++RY + + PW L K+   +     +T L +  E +R+   LL+  +P    +++++L
Sbjct: 417 INRYAEQRSPWRLAKSEDPKDKEIVATSLSLMAEALRRAVGLLEPVMPATTTRVYELL 474


>gi|145332859|ref|NP_001078295.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
          Length = 533

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 181/453 (39%), Positives = 261/453 (57%), Gaps = 9/453 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A
Sbjct: 67  EGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY+ 
Sbjct: 127 AANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRA 186

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L      
Sbjct: 187 DYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQ 243

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---L 239
           +P F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y   L
Sbjct: 244 NPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISAL 303

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T      N + + +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+   
Sbjct: 304 TEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLTKD 363

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN IG
Sbjct: 364 GMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIG 423

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V+ 
Sbjct: 424 NLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAVLE 483

Query: 420 LVSEVDRYFDAQKPWELKK---TNPDRASTVLY 449
           + +  + Y D + PW L K    + + A+ VL+
Sbjct: 484 IGNAGNTYMDQRAPWFLFKQGGVSAEEAAKVLF 516


>gi|167957600|ref|ZP_02544674.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 493

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/477 (39%), Positives = 281/477 (58%), Gaps = 26/477 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KLYI+TAI Y N++PHIG+A + ++AD+ AR+HR  G +V F  GTDEHG KI+  AQ 
Sbjct: 3   KKLYITTAIPYANSKPHIGNALDYLLADIWARYHRQLGKEVRFQAGTDEHGNKISAKAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    +V+Q    F+++ + +   Y DFIRTT+  H    + +WKK+S    IYKG Y
Sbjct: 63  EGLDPITYVNQTHLYFKEIMNKIGAQYTDFIRTTDSHHIQAVQYIWKKLSPY--IYKGTY 120

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWYS+ +E++ +D +V    +G   +  H  P + + EE Y+FRL+ +  ++ +  E++
Sbjct: 121 EGWYSVGEESFVSD-KVAAANNG--ISPDHGVPYERLSEENYYFRLTHFVPQIRNAIENN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P  R+ EV++ +  G++DLS+SR  K   WG+ +P D   ++YVWIDAL+NY+T 
Sbjct: 178 EIKIFPESRKKEVLNLLNDGIEDLSVSRPRKNLAWGVSVPGDDNQVIYVWIDALSNYITV 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D  D S   +WPA++ V+GKDILRFHAI WPA L++  LPLPK++  HG I   G+
Sbjct: 238 LGYPD--DESWRDYWPANVQVVGKDILRFHAIIWPAILMALGLPLPKQILVHGHIGFDGK 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P EVI+  G DA RY+  R I    DG +  +  +K  N +L N +GNL
Sbjct: 296 KMSKSLGNVVSPNEVIDTYGADAFRYYFSRHIPTLDDGDFTWEKFEKAYNNELGNDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   M+L+   G++   G     +  I        Q  R+ M       A+ QV   +
Sbjct: 356 VQRVAKMVLRYQAGVV---GELNRGEHDI--------QLYRDAMDEMRFSDAIDQVWGKI 404

Query: 422 SEVDRYFDAQKPWELKKTNPDRAST-----VLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++Y +  KPWE+ K   D  ST     +L   V  I Q+A LL  F+P+ ++KI
Sbjct: 405 RATNQYLEQVKPWEVAKNKDDPESTEHLSDILQDAVGSIMQIADLLVPFLPEASSKI 461


>gi|307637700|gb|ADN80150.1| Methionyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 651

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/510 (38%), Positives = 303/510 (59%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT++ H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPNNYERFFKAKKLQDMVLQDTEPLFCKM 509


>gi|325283464|ref|YP_004256005.1| Methionyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315273|gb|ADY26388.1| Methionyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 685

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 188/513 (36%), Positives = 290/513 (56%), Gaps = 12/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L+I+TAI Y N  PHIGH +E I+AD +AR+ RL G       GTDEHG+KI KAA  
Sbjct: 8   KQLFITTAIDYANGVPHIGHVFEKILADAIARYQRLSGRPTHLLLGTDEHGEKILKAAAA 67

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+T +  VD  + R FR + + L IS D F+RTT+ +H    + + +++ D GDIY   
Sbjct: 68  QGITAQELVDDLSQRAFRGLWERLGISLDQFVRTTDAQHQQFVQDILQRVYDAGDIYFAE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G YS+  E Y  + E+ +G DG +       P +   E  YFF++  YQ  L  Y E+
Sbjct: 128 YEGLYSVGSERYVTEKELVEGPDGIKRVPGDKEPPELRREANYFFKMEKYQPWLREYLEA 187

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           HP+ I P   RNEV+  +K  L DLS+SR  +   WG+ IP DP+++ YVW DAL  YL+
Sbjct: 188 HPDLIQPAGFRNEVLEMLKEPLGDLSISRPKERIPWGVPIPWDPEHVTYVWFDALLAYLS 247

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK- 299
                  P+    + W    HVIGKDIL+ HAI+WP  L SA LP+  ++  H  IL + 
Sbjct: 248 GPVGKGQPENVTGQTW----HVIGKDILKPHAIFWPTMLKSAGLPVYDRLVVHSHILAED 303

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN IDP +++++  +DA+RY L+RE + G D  + +  L  R+N +LAN +G
Sbjct: 304 GRKMGKSLGNAIDPEQLVQDFPLDAIRYALLREASMGSDTPFGETILVGRLNGELANDLG 363

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++RS+SMI K   G+IP  G     ++ I++    +   +   + +  ++ AL   + 
Sbjct: 364 NLLARSLSMIEKYRGGLIPAAGELGVREQKIVADAQSLPGRVMALVNDFKLNMALDAAMG 423

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V +++RY    +PW+L K      +  TVLY   E +R  ++ L+  +P  A ++   L
Sbjct: 424 FVRDLNRYIAESEPWKLAKDEAQAGQLDTVLYTVAEGLRVASVALEGAIPGKAQELRRQL 483

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + D++   ++    L P     ++ + +FP+ 
Sbjct: 484 GLGDQSYTLEAA-WGLTPAGTRIQSGEVLFPKL 515


>gi|325997892|gb|ADZ50100.1| Methionyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 538

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT++ H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKL 472


>gi|325996303|gb|ADZ51708.1| Methionyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 538

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT++ H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKL 472


>gi|225166021|ref|ZP_03727769.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799733|gb|EEG18214.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 520

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 189/490 (38%), Positives = 283/490 (57%), Gaps = 28/490 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+TAI Y N  PH+GHAYE ++ DV+ARF R  G DV F TG DEHGQK+ + A
Sbjct: 2   KKKTFYITTAIDYVNGSPHLGHAYEKVLTDVIARFRRAMGDDVYFLTGVDEHGQKVQQTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  + F D+ S+ FR +   L+IS DDFIRTTE RH +  R L +K+ DKG+IYK 
Sbjct: 62  QKRGIPPQQFCDEISQEFRAVCATLNISNDDFIRTTEPRHKNVVRDLLQKLYDKGEIYKA 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+G+YS R E +  D +  +  DG +       V  + E  YFF+L AYQD L+ +  +
Sbjct: 122 EYTGFYSTRQEQFLQDKD--RNPDGTWPEI-FGEVTEITESNYFFKLRAYQDWLIDFLNT 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +  F+ P  R+ +V+ F+   L DL +SR  +  +WGI +P D  ++ YVW DAL NY +
Sbjct: 179 NENFVFPRYRQKQVLEFLSEPLNDLCISRPKERLEWGIPLPFDENFVTYVWFDALVNYYS 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
               +D P       WPAD HVIGKDIL   HA+YWP  L +  +  P+ + +HG+    
Sbjct: 239 AV--IDKPG-----VWPADFHVIGKDILVPPHAVYWPIMLKALGIEPPRALLAHGWWSIN 291

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN ++P+    + GVDALRYFL+RE++ G+D  +       R NA+LAN +G
Sbjct: 292 GSKMSKSTGNFVEPVSFAAQYGVDALRYFLIREMSVGQDSDFSLQQFLARYNAELANNLG 351

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI--------H 411
           NLV+R+++M  +   G +P       S+   L    R L+ + E  ++++I        H
Sbjct: 352 NLVNRTLNMTNRFAGGCVPPLPPSPPSEGGDL---ERELRALWEKTRDEVIELSEGFQFH 408

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV----EVIRQLAILLQAFVP 467
            AL +    ++  +RY + + PW+L K+       +L V++    E +R  A LL A +P
Sbjct: 409 IALERTFGFITATNRYVEQRAPWKLGKSAEAADQALLRVSLATMAEALRLGATLLVAVMP 468

Query: 468 KLANKIFDIL 477
           +   K++ +L
Sbjct: 469 ETVEKVYGVL 478


>gi|171914551|ref|ZP_02930021.1| methionyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 527

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 200/522 (38%), Positives = 314/522 (60%), Gaps = 29/522 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI Y NA PHIGHAYE ++ADV+ARF RL+G +V F TG D+HGQK+ K+A  AGV
Sbjct: 6   YITTAIDYTNAPPHIGHAYEKVLADVMARFQRLNGREVYFLTGVDQHGQKVQKSADKAGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + + FVD  S+ F ++   L + YD +  TT + H    R + +K+ D G +YK  Y+G+
Sbjct: 66  SPQQFVDDISQKFIELWAKLGVQYDGWAATTAEPHKKVVRAMLQKLHDAGQLYKQSYTGF 125

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+R E +  D E  +G DG +       V+ ++EE ++F+LS + D L +Y +SHP+FI
Sbjct: 126 YSVRQEQFLTDKE--RGPDGTFGEEWGEVVE-LQEENWYFKLSEHVDWLRAYIKSHPDFI 182

Query: 188 LPIERRNEVISFVKSGL-KDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            P  R N+V++ +++ + +DL +SR  +   WGI +P D +++ YVW DALTNY++  GY
Sbjct: 183 FPAFRTNDVLNALENSVGQDLCISRPQERLSWGIPLPFDERFVNYVWFDALTNYISFAGY 242

Query: 245 LDNPDGSKA-----KFWPADLHVIGKDIL-RFHAIYWPAFLLSANLP---LPKKVFSHGF 295
           L +  G++        WPAD HVIGKDIL   HAIYWP  L +   P   +PK +  HG+
Sbjct: 243 LSDEVGNEGLPEFQSIWPADAHVIGKDILVPAHAIYWPIMLHALGFPDDQMPKLIV-HGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              KG+K+SK+LGNV+DP EV      +ALRY+L+R+++ G D    ++ ++   N +LA
Sbjct: 302 WNIKGQKMSKTLGNVVDPNEVSNVFTPEALRYYLMRDMSTGYDADLSEERMQIAYN-ELA 360

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            G+GNL++R+++M  K  +G++ T G +  E + ++    +       E M N  IH  +
Sbjct: 361 KGLGNLLNRALNMCQKYREGVLSTGGGYDDEVNLALRQTVAAAPAAYVEEMNNWAIHNGI 420

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+   +V+  +++ D  +P++L K +P++A+   +VLY   E +  ++ILL   +P+   
Sbjct: 421 AEAWKIVTHANQFVDMTQPFKLAK-DPEQAARLDSVLYHLAEALAHVSILLSPIMPEACK 479

Query: 472 KI-FDILFVADENRCFQSLDQR---LKPGFMLHKTFDPIFPR 509
           K+ F + +   E   FQ  D     L  G  L +   P+FPR
Sbjct: 480 KLQFQLGWTPAEG--FQVKDLAWGLLSEGHQLGQPV-PLFPR 518


>gi|296807197|ref|XP_002844184.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843667|gb|EEQ33329.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 588

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 189/516 (36%), Positives = 282/516 (54%), Gaps = 28/516 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +AA   G
Sbjct: 52  YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQAALQNG 111

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  +   D+N + F+ +A   ++S+D FIRTT+  H    +  W+ ++ +G IY+G + G
Sbjct: 112 LEPQALCDRNCKTFKTLAKEANVSHDHFIRTTDSAHKSAVQFFWENLNHRGYIYEGKHEG 171

Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE +Y    V+   D   G+   A       V++ +E  Y F+LSA+QD+LL +Y
Sbjct: 172 WYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFTQETNYHFKLSAFQDRLLEHY 231

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +P FI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+DAL NY
Sbjct: 232 RKNPTFIQPQVYMDSIVQNVSSGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 291

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H     
Sbjct: 292 ITYAGYPFTPGREEESIWPADVHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 351

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     L  G+
Sbjct: 352 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAINGGLASDTDYDNSYIVRDYKNILQGGL 411

Query: 359 GNLVSRSV--------SMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQL 409
           GNL SR +          ++    G  P  G A  +S+   +   S+V   + + M    
Sbjct: 412 GNLCSRIMRGKGWNVRESVITATSG--PDRGKAKNKSEYEHMEFLSKVPSLVSKQMNELN 469

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQ 463
             RAL +++ ++ + +RY     PW L K   TNP   D+   V+Y   E +R   ILLQ
Sbjct: 470 PRRALEEIVKIIDQTNRYVQNTGPWNLAKEAATNPAAHDQLVGVIYNAAESLRITGILLQ 529

Query: 464 AFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGF 497
            F+P+ A ++ D+L V D+   R F +    + P +
Sbjct: 530 PFMPEKAKRLLDMLGVEDDLSKRSFAASSYGVDPDY 565


>gi|15806450|ref|NP_295156.1| methionyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|25009407|sp|Q9RUF3|SYM_DEIRA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|6459194|gb|AAF11005.1|AE001988_1 methionyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 681

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 279/494 (56%), Gaps = 12/494 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++RE  +I+ AI Y N  PHIGH YE I+AD +AR+ RL G DV F  GTDEHG+KI+KA
Sbjct: 16  RDRE-FFITAAIDYANGTPHIGHVYEKILADAIARYQRLAGRDVTFVMGTDEHGEKISKA 74

Query: 62  AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A   GVT +  VD  + R F+ +   L ISYD FIRTT  +H    + + +++ D GDIY
Sbjct: 75  AAKGGVTPQELVDDLSERAFQGLWKKLGISYDFFIRTTSAKHKKYVQDVLQRVYDAGDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
              Y G YS+  E Y  + E+ +G DG + +    +P +   E  YFF +  YQ  LL  
Sbjct: 135 FAEYEGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFNMQKYQPWLLET 194

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
            + +P+ I P   RNEV+  +K  +  LS+SR      WGI++P D  ++ YVW DAL +
Sbjct: 195 LQQNPDLIQPAGYRNEVLEMLKEDIGPLSISRPKARVPWGIELPWDTDHVTYVWFDALLS 254

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT             K W    HVIGKDIL+ HA++WP  L +A LPL +++  H  IL
Sbjct: 255 YLTPLVSQGQDASMSGKAW----HVIGKDILKPHAVFWPTMLRAAGLPLYRRLVVHSHIL 310

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            + G K+ KSLGN IDP E++    VDA+RY L+RE + G D  + +  L  R+N+DLAN
Sbjct: 311 AEDGRKMGKSLGNAIDPEELVAAWPVDAIRYALLREASLGADSPFGEGVLVSRLNSDLAN 370

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+VSMI K   G+IP     T+ +  I +    +  E+   +    I+ A+  
Sbjct: 371 DLGNLLSRTVSMIQKYRGGVIPAATEPTDREREIEAAARALPDEVLRLVDELKINMAIDA 430

Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +S V +++RY     PW L K+     R  TVLY   E +R  ++ L+A +P  A ++ 
Sbjct: 431 AMSFVRDLNRYIAESTPWTLAKSPETQGRLDTVLYTAAEGLRVASVALEAVIPTKAKELR 490

Query: 475 DILFVADENRCFQS 488
           + L +  +    Q+
Sbjct: 491 EQLGLGRQGYPLQA 504


>gi|171692863|ref|XP_001911356.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946380|emb|CAP73181.1| unnamed protein product [Podospora anserina S mat+]
          Length = 637

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 194/502 (38%), Positives = 293/502 (58%), Gaps = 26/502 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHR-LDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PHIGH Y M +ADVL R+   L     +  TGTDEHG KI +AA N  
Sbjct: 70  YVTTPIFYVNAAPHIGHMYSMTLADVLKRYQSVLHSRPAILLTGTDEHGMKIQQAASNKD 129

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  K F D+ +  F+++A    ISY+ FIRTT+  H       W  + +KG IY+  + G
Sbjct: 130 MHPKQFCDETAEQFKELASTAQISYNRFIRTTDTDHIQAVEHFWFLLQEKGLIYESKHEG 189

Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DEA+Y + ++ K  D   G+ + A     + V+W+EE  Y FR++A +++LL +Y
Sbjct: 190 WYSVSDEAFYPESQIEKKMDAFTGEVFMASVESGSKVEWVEERNYHFRMTALRERLLGFY 249

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +PE+++P +R  +V+ +V++ L DLS+SR      WG+++P D    +YVW+DAL NY
Sbjct: 250 GENPEWVVPAKRMGDVVDWVRNHLTDLSISRPASRLSWGVRVPGDASQTIYVWVDALINY 309

Query: 239 LTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T  G+ +  P   +   WPAD+HVIGKDI+RFH +YWPA LL+ +LP+PKKV +H    
Sbjct: 310 ITAAGFPNWQPGRREVGGWPADVHVIGKDIVRFHCVYWPALLLALDLPMPKKVLTHAHWT 369

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSLGNV++P+ V+   G D LR++L+ E   G D  Y+ D L  +    L  G
Sbjct: 370 MNRTKMSKSLGNVVNPMYVMNVHGADVLRFYLMFEGGIGNDADYNNDNLLVKHKKYLQGG 429

Query: 358 IGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNLVSR     L D   +I  +P    E  E  L+    ++ +  EN+      RA+ +
Sbjct: 430 VGNLVSRITRSKLWDLKEIISRSPRGRIEFPEDNLATLPAIVDKHMENLDPVSALRAIME 489

Query: 417 VIS----LVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           V +    L+SE++       PW LKK+    + D A  ++ +  E +R   ILLQ F+P 
Sbjct: 490 VATQANALLSEIE-------PWRLKKSTNQEDHDLADEMVCLAAESLRVCGILLQPFLPT 542

Query: 469 LANKIFDILFVADENRCFQSLD 490
            A+++ D+L V  ENR F++ +
Sbjct: 543 KADQLLDMLGVLPENRTFKNTE 564


>gi|156082730|ref|XP_001608849.1| methionyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796099|gb|EDO05281.1| methionyl-tRNA synthetase, putative [Babesia bovis]
          Length = 534

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 185/474 (39%), Positives = 278/474 (58%), Gaps = 8/474 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+TA++Y N  PHIGH YE++ +D+++RF ++ G+  +  +GTDEHG K+A  A++
Sbjct: 27  KKYYITTALSYTNGPPHIGHTYEIVTSDIISRFFKVFGMVPILLSGTDEHGLKVATTAES 86

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      D  S  F D    L  +   F+RTTE RH+ + + +W+ + D+GDIY G Y
Sbjct: 87  YGMFPIELADYYSAKFHDNNTDLLTATHIFVRTTEPRHYKSAQKIWRILRDRGDIYLGEY 146

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWY++R+E +    EV   A          P   M+E  YFFR+S YQD L+    S P
Sbjct: 147 SGWYNVREETFLT--EVEAAATDYKDPLSGKPYTLMKESSYFFRMSKYQDMLIEKLSSDP 204

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++ P   R E++S +K  L+DLS+SR  F WGI +PDDP ++MYVW DALT YL+  G+
Sbjct: 205 AYLQPDSARAEILSRLKKPLEDLSVSRCNFKWGIPVPDDPSHVMYVWSDALTGYLSGIGF 264

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
            D  D S+ K WP DL VIGKDI+ F A+ W + L+S  +PLPK +F+HGFI    G K+
Sbjct: 265 GDFDDISQLKLWPPDLQVIGKDIIWFFAVIWTSILMSLEVPLPKTIFAHGFITAADGRKM 324

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++  E++++ GVD LRY+++R+   G D  +D   L    N+DL + IGNL+ 
Sbjct: 325 SKSLGNVVNTKELLDKYGVDTLRYYMIRDSVFGSDVKFDLSSLADLHNSDLTDTIGNLLH 384

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R  ++ +K  +G IP P A   +      V   V +    ++Q   +  AL  VI    +
Sbjct: 385 RITTLCVKFSNGCIP-PLASKSAPRPFCMV--DVARRTLSHLQRFALQDALVTVIEAYRD 441

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++Y   ++PW  K +   R  T+  V +E I  L  L++  +P  ++ +F  L
Sbjct: 442 TNKYLTDREPWA-KGSVDTRLDTIRNV-LEAIYFLNHLMEPVIPLASSVVFKKL 493


>gi|15612032|ref|NP_223684.1| methionyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7388283|sp|Q9ZKG9|SYM_HELPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4155547|gb|AAD06543.1| METHIONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 656

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 290/473 (61%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +V                  +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAVSKVDNTDSKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  D   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLDNKMAHFERAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSLKS-TKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKL 472


>gi|28572916|ref|NP_789696.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28411049|emb|CAD67434.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 583

 Score =  342 bits (878), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 195/550 (35%), Positives = 297/550 (54%), Gaps = 77/550 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T + Y N  PHIGHAY ++++DV AR+ R  G D  F +GTDEHG K+ +AA+   
Sbjct: 3   FYITTPVFYVNDIPHIGHAYTLVVSDVFARWQRQSGKDTFFLSGTDEHGLKVLRAAEEKN 62

Query: 67  VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T + + D   +  ++ + D++ IS DDF+RTTE RH +  +    ++ +   IY G YS
Sbjct: 63  MTPQGWADLMVKTAWKPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYS 122

Query: 126 GWYSLRDE--------AYYNDDEVY-------------KGADGQYYNAQHN-PVQWMEEE 163
           G+Y +  E        A  ND+ V              +G +  Y+   H   ++   E+
Sbjct: 123 GYYCVSCEEFKTVSQSALPNDESVNGTLGKDPRTCSLPQGEEQNYFCEVHGCQLEHFTEK 182

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFFRLSA+ D+LL  Y+ +P+FI P    NEV+ FVK+G+ DLS+SR +F WGI++P D
Sbjct: 183 NYFFRLSAFTDRLLDLYKKNPDFIEPKSAYNEVVQFVKNGVSDLSISRSSFTWGIEVPWD 242

Query: 224 PQYIMYVWIDALTNYL--------------TTTG---------------YLDNPDGSK-- 252
             +++YVW DAL NYL              TT G                +  P GS   
Sbjct: 243 EGHVVYVWFDALINYLTPVMSAKEELPIDGTTPGGAEFCTHSNLNTLESSIPGPGGSAES 302

Query: 253 --------------------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
                                K+WPA  H+IGKDILRFHA+ WPA L++A LP+P+K+F+
Sbjct: 303 DRLSHTLSTSADNAALTSPFKKYWPAS-HIIGKDILRFHAVIWPAMLMAAGLPVPEKIFA 361

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L  G+K+SKS    I P ++ +  GVDA+RY+ +R+   G+D  +  + +    N+
Sbjct: 362 HGWLLVDGQKMSKSKLTGIKPQDLTDIFGVDAVRYYFLRQPVFGQDYSFSIESIAACYNS 421

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LA+G GNL  R  SM     +G +  P  ++E DES+L  C  V     + +   + H 
Sbjct: 422 ELADGYGNLACRLSSMYTTYLNGRVIVPKIYSEEDESLLQACKDVSDRACKAIDELIPHI 481

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+A++ SL    + Y   Q+PW L KK + +R + VLY  +  +  + ILL   +P++ N
Sbjct: 482 AMAEIWSLAVRANTYTTRQQPWSLHKKQDDERLACVLYTALRALSTITILLSPIMPRITN 541

Query: 472 KIFDILFVAD 481
           K++   F AD
Sbjct: 542 KLWSA-FGAD 550


>gi|317146103|ref|XP_001821294.2| methionyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 574

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 275/495 (55%), Gaps = 26/495 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           + ++  Y++T I Y NA PH+GH Y MIIAD+L R+  L G  D    TGTDEHG KI +
Sbjct: 51  EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKIQQ 110

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A + T+ F D N + F D+A   ++ Y+ FIRTTE  H  + +  W+ +  +G IY
Sbjct: 111 AALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP-VQWMEEEGYFFRLSAYQD 174
              + GWYS+ DE +Y   +V+   D      +  +A+    V+W  E  Y FRLSA+Q+
Sbjct: 171 TSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWSSETNYHFRLSAFQE 230

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232
           +LL  Y++   FI P     E++  V SGL+DLS+SR  +   WGI +P D    +YVW+
Sbjct: 231 RLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTWGIPVPGDDTQTIYVWL 288

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  
Sbjct: 289 DALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 348

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG      EK+SKS GNV++P   ++  GVD +R+FL  +     D  YD   + +    
Sbjct: 349 HGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLAGDADYDNSYIIRDYKK 408

Query: 353 DLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            L +GIGNLV R++        S I+    G +P   A  E D     +      ++ E 
Sbjct: 409 LLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELP---AANEQDLQFEQLLRETPVKVGEQ 465

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           M++     AL  ++ L+ + ++Y    +PW+    +  +A  VL+   E +R   ILLQ 
Sbjct: 466 MESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNVAESLRIAGILLQP 521

Query: 465 FVPKLANKIFDILFV 479
           F+P  + ++ D+L V
Sbjct: 522 FMPTKSKELLDVLRV 536


>gi|238491664|ref|XP_002377069.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220697482|gb|EED53823.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 574

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 275/495 (55%), Gaps = 26/495 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           + ++  Y++T I Y NA PH+GH Y MIIAD+L R+  L G  D    TGTDEHG KI +
Sbjct: 51  EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKIQQ 110

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A + T+ F D N + F D+A   ++ Y+ FIRTTE  H  + +  W+ +  +G IY
Sbjct: 111 AALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP-VQWMEEEGYFFRLSAYQD 174
              + GWYS+ DE +Y   +V+   D      +  +A+    V+W  E  Y FRLSA+Q+
Sbjct: 171 TSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWSSETNYHFRLSAFQE 230

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232
           +LL  Y++   FI P     E++  V SGL+DLS+SR  +   WGI +P D    +YVW+
Sbjct: 231 RLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTWGIPVPGDDTQTIYVWL 288

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  
Sbjct: 289 DALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 348

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG      EK+SKS GNV++P   ++  GVD +R+FL  +     D  YD   + +    
Sbjct: 349 HGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLAGDADYDNSYIIRDYKK 408

Query: 353 DLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            L +GIGNLV R++        S I+    G +P   A  E D     +      ++ E 
Sbjct: 409 LLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELP---AANEQDLQFEQLLRETPVKVGEQ 465

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           M++     AL  ++ L+ + ++Y    +PW+    +  +A  VL+   E +R   ILLQ 
Sbjct: 466 MESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNVAESLRIAGILLQP 521

Query: 465 FVPKLANKIFDILFV 479
           F+P  + ++ D+L V
Sbjct: 522 FMPTKSKELLDVLRV 536


>gi|28493730|ref|NP_787891.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28476772|gb|AAO44860.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 583

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 195/550 (35%), Positives = 297/550 (54%), Gaps = 77/550 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T + Y N  PHIGHAY ++++DV AR+ R  G D  F +GTDEHG K+ +AA+   
Sbjct: 3   FYITTPVFYVNDIPHIGHAYTLVVSDVFARWQRQSGKDTFFLSGTDEHGLKVLRAAEEKN 62

Query: 67  VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T + + D   +  ++ + D++ IS DDF+RTTE RH +  +    ++ +   IY G YS
Sbjct: 63  MTPQGWADLMLKTAWKPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYS 122

Query: 126 GWYSLRDE--------AYYNDDEVY-------------KGADGQYYNAQHN-PVQWMEEE 163
           G+Y +  E        A  ND+ V              +G +  Y+   H   ++   E+
Sbjct: 123 GYYCVSCEEFKTVSQSALPNDESVNGTLGKDPRTCSLPQGEEQNYFCEVHGCQLEHFTEK 182

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFFRLSA+ D+LL  Y+ +P+FI P    NEV+ FVK+G+ DLS+SR +F WGI++P D
Sbjct: 183 NYFFRLSAFTDRLLDLYKKNPDFIEPKSAYNEVVQFVKNGVSDLSISRSSFTWGIEVPWD 242

Query: 224 PQYIMYVWIDALTNYL--------------TTTG---------------YLDNPDGSK-- 252
             +++YVW DAL NYL              TT G                +  P GS   
Sbjct: 243 EGHVVYVWFDALINYLTPVMSAKEELPIDGTTPGGAEFCTHSNLNTLESSIPGPGGSAES 302

Query: 253 --------------------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
                                K+WPA  H+IGKDILRFHA+ WPA L++A LP+P+K+F+
Sbjct: 303 DRLSHTLSTSADNAALTSPFKKYWPAS-HIIGKDILRFHAVIWPAMLMAAGLPVPEKIFA 361

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L  G+K+SKS    I P ++ +  GVDA+RY+ +R+   G+D  +  + +    N+
Sbjct: 362 HGWLLVDGQKMSKSKLTGIKPQDLTDIFGVDAVRYYFLRQPVFGQDYSFSIESIAACYNS 421

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LA+G GNL  R  SM     +G +  P  ++E DES+L  C  V     + +   + H 
Sbjct: 422 ELADGYGNLACRLSSMYTTYLNGRVIVPKIYSEEDESLLQACKDVSDRACKAIDELIPHI 481

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+A++ SL    + Y   Q+PW L KK + +R + VLY  +  +  + ILL   +P++ N
Sbjct: 482 AMAEIWSLAVRANTYTTRQQPWSLHKKQDDERLACVLYTALRALSTITILLSPIMPRITN 541

Query: 472 KIFDILFVAD 481
           K++   F AD
Sbjct: 542 KLWSA-FGAD 550


>gi|308163205|gb|EFO65564.1| Methionyl-tRNA synthetase [Giardia lamblia P15]
          Length = 572

 Score =  342 bits (877), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 189/562 (33%), Positives = 292/562 (51%), Gaps = 54/562 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ +E +Y++T I Y N +PHIGH +  ++AD L RF +L G +    TGTDEHGQK+ +
Sbjct: 1   MRTKE-VYLTTPIYYVNGKPHIGHVFTTLLADTLKRFRKLQGFETYLMTGTDEHGQKVQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +A+  G+  + + D  ++ F     +   +  D F+RTT  +H +    LW+K+   G I
Sbjct: 60  SAEKLGLQPQQWCDNMAKTFETYFLENFGLCPDFFMRTTMSKHVEMATKLWEKLRAVGLI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLSAYQD 174
           YK  Y GWY + DEA+  +  +  G D Q            P  ++ EE Y F+LS++Q+
Sbjct: 120 YKDKYEGWYCIADEAFVTETNLKDGVDAQGKPCKVSTESGQPCVFLSEENYKFKLSSFQE 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
            LL +Y  +PE I+P  R+ E++SF++SGL D+S+SR      WGI +P D  ++MYVWI
Sbjct: 180 PLLKFYRDNPEIIIPAFRQAEIVSFIQSGLHDISISRSKDKISWGIPVPGDSDHVMYVWI 239

Query: 233 DALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           DALT YLT      NPDG+  ++ WPAD+  +GKDI RFH +YW AFL+ A +P P++ F
Sbjct: 240 DALTIYLTAADSTINPDGTFSSRLWPADVQFLGKDIARFHCVYWLAFLMGAGIPCPRRFF 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            HG+     +KI KSLGN +DP  ++E  G+D ++YF++RE +   D    ++ +  R  
Sbjct: 300 IHGWWTINQQKIGKSLGNALDPTSLVETYGLDGIKYFMLREGSPANDPSITEELISMRTE 359

Query: 352 ADLANGIGNLVSRSV--------------------------SMILKDYDGMIP--TPGAF 383
           +DLAN +GNL  R                            S+ +K+    I    P   
Sbjct: 360 SDLANVLGNLTMRCTADSLLPDRIWTDPSKLFEGVSFTQIRSLWMKNRKSSIAELMPADV 419

Query: 384 TESDE-----------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            E +             +L     + +E+   M N  I   L+++  ++  ++ Y     
Sbjct: 420 GERENISSIIRIDDISDLLDKGLVIYEEVTGLMNNVDIPGTLSKIFEILVGINNYIQLTM 479

Query: 433 PWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-- 488
           PW L  K+   +    V+Y   E++R  A LL  F+P+ A  I D L V  E+R  Q   
Sbjct: 480 PWVLIKKEETKNGHEFVMYCATELLRICATLLLPFIPQKAPLILDQLGVPSEDRAIQKDV 539

Query: 489 -LDQRLKPGFMLHKTFDPIFPR 509
                + PG  L +   P+FP+
Sbjct: 540 LTIGYVTPGLALGEKLPPLFPK 561


>gi|125834886|ref|XP_694935.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Danio
           rerio]
          Length = 595

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/505 (39%), Positives = 288/505 (57%), Gaps = 27/505 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NA PHIGH Y  + AD L R+  L   +    TGTDEHG KI +AA +AG 
Sbjct: 48  YITTPIFYVNAAPHIGHVYSAVTADCLHRYKLLQRYNSRLATGTDEHGLKIQQAAGSAGK 107

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  + S +F+ +     ISY D+IRTTEKRH       W  +  KG IYKG Y GW
Sbjct: 108 DPLNFCTEVSESFKHVFQRCGISYTDYIRTTEKRHRQAVEHFWTVLLSKGYIYKGTYEGW 167

Query: 128 YSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           YS  DE++  + +V    D +           + V+WM E+ Y FRLS ++ +LL +  S
Sbjct: 168 YSTPDESFLTETQVTDSTDSEGRRIKVSTESGHKVEWMNEDNYMFRLSDFRTQLLHWLRS 227

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           +P  I P++ ++ V+ +++   + DLS+SR+     WGI +P DP+  +YVW+DAL NYL
Sbjct: 228 NPNTIQPVKFQHLVLQWLEDDDIPDLSVSRQKSRLQWGIPVPGDPEQTIYVWLDALVNYL 287

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  N     +K+W    HV+GKDIL+FHAIYWPAFLL+A L LP+K++ H     K
Sbjct: 288 TVVGYPQN----HSKWWSVVHHVVGKDILKFHAIYWPAFLLAAGLALPQKIYVHSHWTVK 343

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS+GNVI+P+E IE+  VD LRYFL+R+     D  Y  D + K  N++LA+ +G
Sbjct: 344 GKKMSKSIGNVINPLESIEKFTVDGLRYFLLRQGVPDSDCDYYDDKVMKMCNSELADALG 403

Query: 360 NLVSRSVSMILKD-----------YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            L++R  +  L             +  + P+  A +E D  ++   S +   I ++ +N 
Sbjct: 404 GLLNRCAAPSLNPTQVYPRFSTSCFPAVGPSGKAVSE-DYRMIEAVSALPGIIEQHFENL 462

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAF 465
            +++AL  + + V   + +     PW L + NP+      T+L+V++E +R   ILLQ  
Sbjct: 463 YVYKALEAIGACVRLTNGFVQRHAPWRLDRNNPEEQQWLDTILHVSLECLRIYGILLQPV 522

Query: 466 VPKLANKIFDILFVADENRCFQSLD 490
           VP LA+KI   L V  E R + SL+
Sbjct: 523 VPDLADKILSRLGVTPEERSWNSLN 547


>gi|113953658|ref|YP_730540.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881009|gb|ABI45967.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 514

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 179/474 (37%), Positives = 264/474 (55%), Gaps = 9/474 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  I  D LARF RL+G +V+F TG DEHGQKI + A + G++
Sbjct: 5   LTTPLYYVNDKPHLGSTYTTIACDALARFQRLEGHEVVFVTGVDEHGQKIQRTAADQGIS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++ + ++    +  DIS D F+RTT  RH    +  +++  + GDI  G  +GWY
Sbjct: 65  PIDHCNRITASYEKAWNEWDISNDRFVRTTSPRHLPLVQQFFQRCEEAGDIRSGRQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D      A     +    P++W +EE  FF LS YQ+++ +  +   +FI 
Sbjct: 125 CVGCEEFKDDP---AEAVNPTCSIHQKPLEWRDEENLFFCLSHYQEQIEAIIK-QSDFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245
           P  RRNE+ +FV  GL+D S+SR   DWG+ +P    +  YVW DAL  YLT     G  
Sbjct: 181 PASRRNEIQNFVAGGLRDFSISRVNVDWGLPVPGHQGHTFYVWFDALLGYLTALLDDGGT 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D      WPA+ HVIGKDILRFHA+YWPA L+SA LPLPKKVF HGF+  +G+K+ K
Sbjct: 241 IDLDRLNTIGWPANQHVIGKDILRFHAVYWPAMLMSAGLPLPKKVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  ++   G DA+R++L+R+I  G DG + +      VN DLAN IGNL++R+
Sbjct: 301 SIGNVLDPELLLNRCGTDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  K ++   PT  +      ++       +   RE M +    +A   ++ L  + +
Sbjct: 361 SSMSRKWFNESTPTVASKDSDQHALRQAAETAIASAREAMPSMAFQKAAESILQLAIQAN 420

Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y + Q PW   K     A     LY  +E  R +  LL+  VP L+ +I   L
Sbjct: 421 GYLNDQAPWSKMKKGGQEAQVAVDLYGVLESARLVGWLLKPLVPDLSERILSQL 474


>gi|115398011|ref|XP_001214597.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
 gi|114192788|gb|EAU34488.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
          Length = 578

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 191/506 (37%), Positives = 277/506 (54%), Gaps = 30/506 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y MIIADVL R+  L G  D    TGTDEHG KI +AA
Sbjct: 52  KKPYYVTTPIFYVNAAPHVGHLYTMIIADVLKRWRALAGDTDAQLLTGTDEHGMKIQQAA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+ T+ F D N + F  +A   ++ Y+ FIRTT+  H +  +  W+ +  +G IY  
Sbjct: 112 AAAGMDTQAFCDMNFKTFEALAKAANMDYNHFIRTTDAAHKEAVQYFWEMLDHRGYIYTS 171

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V    D      +  +A+    V+W  E  Y FRLSA+Q++L
Sbjct: 172 KHEGWYSVSDETFYPQSQVQNSLDPTTGRKRMVSAETGKAVEWSSETNYHFRLSAFQERL 231

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L  Y++   FI P +   +VI  V SGL+DLS+SR  +  +WGI +P D    +YVW+DA
Sbjct: 232 LELYKT--GFIQPSKYDRDVIRSVSSGLQDLSISRPVERLNWGIPVPGDETQTIYVWLDA 289

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--------RFHAIYWPAFLLSANLPL 286
           L NYLT  GY   P       WPAD+HV+GKDI+        RFH +YWPAFL++ +LPL
Sbjct: 290 LVNYLTKAGYPFPPGQEGRLGWPADVHVVGKDIIRAMLTGTPRFHCVYWPAFLMALDLPL 349

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+ V  HG      EK+SKS GN ++P   ++  GVD +R+FL  +     D  YD   +
Sbjct: 350 PRNVLVHGHWTINHEKMSKSTGNTVNPFFALDRFGVDTMRFFLAYQGGLAGDADYDNSFI 409

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQE---- 400
            +     L +GIGNL  R++    K+    I   T G    ++E  + V    +QE    
Sbjct: 410 IRDYKKLLQSGIGNLTHRAIGCAKKELRTYIVNGTSGGLPPANEDDM-VFEETVQETPAK 468

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++M+      AL +V++LV +  +YF A  PW+    NP      L+  +E +R   I
Sbjct: 469 VAKHMEELNPRAALQEVVTLVEKAQKYFHASAPWQ----NPTEHQRALFNIIESLRIAGI 524

Query: 461 LLQAFVPKLANKIFDILFVADENRCF 486
           LLQ F+P  + ++ D+L V    R  
Sbjct: 525 LLQPFMPTKSKELLDLLRVDLSKRTL 550


>gi|303314943|ref|XP_003067480.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240107148|gb|EER25335.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 568

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 186/505 (36%), Positives = 271/505 (53%), Gaps = 34/505 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +R+  Y++T I Y NA PH+GH Y +++AD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 47  QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G+      DQN + F+D+A   ++ +D FIRTT+  H D  +  W+ +  +G IY 
Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y  + V+   D                V+W  E  Y FRLSA++D+
Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDR 226

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P FI P    + ++  V SGL DLS+SR  +   WGI++P D    +YVW+D
Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPA++HV+GKDILRFH +YWPAFL++ +LPLP++V SH
Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALDLPLPRQVLSH 346

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS GNV++P+  +   GVD LR++L  +     D  Y+   + +R    
Sbjct: 347 AHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKT 406

Query: 354 LANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           L  G+GNL SR V          I    +G  P P   +E+D     +   +    R  M
Sbjct: 407 LQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPP---SEADRKHQQLLEGIRDVTRSWM 463

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +    +A   V+ ++ E               T P   S V+Y T E +R   ILLQ F
Sbjct: 464 DDLNPRKAAESVVGIIHESG------------NTEPTELSRVIYNTAESLRIAGILLQPF 511

Query: 466 VPKLANKIFDILFVAD--ENRCFQS 488
           +P+ + ++ D+L VA   E R F++
Sbjct: 512 MPEKSARLLDMLGVAGDPEKRSFEA 536


>gi|315453125|ref|YP_004073395.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132177|emb|CBY82805.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 615

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 185/504 (36%), Positives = 291/504 (57%), Gaps = 18/504 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I Y N  PH+GHAY   IAD+L +++ L   DV   TGTDEHGQKIA++A    V+
Sbjct: 5   VTTPIYYVNDVPHLGHAYTTFIADMLKKYYALRADDVFLLTGTDEHGQKIAQSALKHQVS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              +  + S  FRD  D   I YD FIRTT+  H    +  ++ +  +GDIYKG Y G Y
Sbjct: 65  PLEYASKISSKFRDQWDFFGIDYDHFIRTTDDSHMFAVQYAFEAMLARGDIYKGTYKGAY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E++   +   +  D Q           +EEE YFF LS YQD+LL +Y  +P+ IL
Sbjct: 125 CVSCESFVTGEA--RCPDCQ------RETSILEEESYFFALSKYQDRLLDFYAKNPKTIL 176

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYL 245
           P  R +EV+ F++ GL DLS++R +F+WGIK+P   +DP++++YVW+DAL NY++  GY 
Sbjct: 177 PTYRTHEVLRFIEQGLHDLSITRTSFEWGIKLPKNLNDPKHVVYVWLDALLNYVSALGY- 235

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
             P+G K  ++   +HV+GKDILRFHAIYWPAFL+S  LPL K +  HG+   +G K+SK
Sbjct: 236 --PNGGKMGYFDHAIHVVGKDILRFHAIYWPAFLMSLELPLFKHLCVHGWWTIEGVKMSK 293

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+    + +  G D LRYFL+RE+  G+DG + ++ L +R NADL+N +GNLV R 
Sbjct: 294 SIGNVLCAQSIAQTYGRDVLRYFLLREVPLGQDGDFSQEALLRRANADLSNTLGNLVQRL 353

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             M  + ++G + +        E   ++ + +   +  +M+    H+ L  +  +    +
Sbjct: 354 SGMAGRYFEGRVQSTHTLEHYKEDYETLHA-LFAPLDGHMEAMQPHKYLEDLWKVFEGAN 412

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                 +PW+++  +  +   +L +   ++ +    L   +P+ A K+  +L V    + 
Sbjct: 413 ALIARTEPWKMQ--DQTKIMALLGLIATLLVKSVYYLYPIIPESAQKLATLLGVELSPKG 470

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPR 509
           F ++ ++     +L KT  P+FPR
Sbjct: 471 FSAICEQKPLSLVLEKT-PPLFPR 493


>gi|317011232|gb|ADU84979.1| methionyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 642

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 192/473 (40%), Positives = 287/473 (60%), Gaps = 6/473 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+   D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKSQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +                   +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTEGKILCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  +   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLENRMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T      L    ++L      +    +H+AL ++  + 
Sbjct: 361 LNRLLGMAKKYFNHSLKS-AKITAYYPKELEKVYQILDNANSFVPKMQLHKALEELFGVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 420 DFLNKLIAKEEPWVLHKNNELEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472


>gi|299116975|emb|CBN75079.1| Methionine--tRNA ligase [Ectocarpus siliculosus]
          Length = 837

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 187/481 (38%), Positives = 283/481 (58%), Gaps = 14/481 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE+ Y++TAI Y N +PHIGHAYE I +DVL+R+ R+ G  V+F TG+DEHGQKIA  A
Sbjct: 119 KRERFYLTTAINYTNGEPHIGHAYEAIASDVLSRYQRMSGKRVIFQTGSDEHGQKIANTA 178

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+      D+ +  F+++   L IS D ++RTT   H +T + LW+  +D GDI+ G
Sbjct: 179 AKLGLQPIDICDKYAGKFQELNKRLLISNDLYMRTTSALHKETSQRLWQICADAGDIFLG 238

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY  R+E Y  D +  + AD  + +A  +P++ M E  YFF++  Y + L+ Y   
Sbjct: 239 KYEGWYDEREEKYVTDSDA-ELAD--FKDAFGSPLKRMSEASYFFKMGKYIEWLIQYITD 295

Query: 183 HPEFILPIERRNEVISFVKSGLK-DLSLSRKTFDWGIKIPD--DPQYIMYVWIDALTNYL 239
           +P FI P   R  +++ +++G + DLS+SR TF  GI +P   D  ++MYVW DALTNYL
Sbjct: 296 NPSFIQPETHRLNILTRLQNGHQNDLSVSRTTFKHGIPVPVGFDQAHVMYVWFDALTNYL 355

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +    LD+ D   + FWPA +HVIGKDI  FH + WP  L SA LPLPK V++HGF+   
Sbjct: 356 SGIHALDS-DNPMSAFWPASVHVIGKDITWFHCVIWPCILKSAGLPLPKTVYAHGFVAAA 414

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGNVIDP ++ ++  VD  R+++ RE   G D  + K  L    N++L N  
Sbjct: 415 DGRKMSKSLGNVIDPHDICDQYAVDTFRWYICREAIFGCDLSFSKRALVLAHNSELCNTF 474

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV RS+S++ K  +G +P      +      +   R   ++   + N  +  A A  +
Sbjct: 475 GNLVHRSLSLMHKYNNGNVPERQVGFDFFPFDFAATRR---DVDAAITNYALQDACAVAM 531

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + E +++    +PW ++K + DR   +  + V +E +  +A LL AF+P    ++F+ 
Sbjct: 532 EALRETNKFLQESEPW-MRKGDEDRPYRLECVRVCLEAVYCVAHLLVAFLPTACTRVFEK 590

Query: 477 L 477
           L
Sbjct: 591 L 591


>gi|146323739|ref|XP_752043.2| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129557560|gb|EAL90005.2| methionyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 574

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/490 (37%), Positives = 267/490 (54%), Gaps = 19/490 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M+I D+L R+  L G  D    TGTDEHG KI +AA
Sbjct: 52  KKPYYVTTPIFYVNAAPHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+  + F D N + F+ +A   ++ Y+ FIRTT+  H +  +  W+ ++ +G IY  
Sbjct: 112 SAAGMDPQAFCDMNCKTFQALAKAANVDYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTA 171

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V    D                V+W  E  Y FRLSA+Q++L
Sbjct: 172 KHEGWYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWSSETNYHFRLSAFQERL 231

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L  Y S  +FI P     +V+  V SGL DLS+SR  +   WGI +P D    +YVW+DA
Sbjct: 232 LELYRST-DFITPSNYMADVVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDA 290

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V  HG
Sbjct: 291 LINYLTKAGYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHG 350

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS GNV++P   I+  GVD +R+FL  +     D  YD   + +     L
Sbjct: 351 HWTINREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLL 410

Query: 355 ANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             GIGNL  R++      L+ Y  D       A T  D    S+  +   ++ E M+   
Sbjct: 411 QWGIGNLTHRTIGCAKGNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPDKVAEQMEKLN 470

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL  +++++ + ++YF A +PW+     P  +   LY   E +R   ILLQ F+P  
Sbjct: 471 PRAALQDIMAIIEKTNKYFHAAEPWK----TPAGSQRALYNVAESLRISGILLQPFMPSK 526

Query: 470 ANKIFDILFV 479
           + ++ DIL V
Sbjct: 527 STELLDILRV 536


>gi|159125043|gb|EDP50160.1| methionyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 574

 Score =  339 bits (869), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 185/490 (37%), Positives = 267/490 (54%), Gaps = 19/490 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M+I D+L R+  L G  D    TGTDEHG KI +AA
Sbjct: 52  KKPYYVTTPIFYVNAAPHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+  + F D N + F+ +A   ++ Y+ FIRTT+  H +  +  W+ ++ +G IY  
Sbjct: 112 SAAGMDPQAFCDMNCKTFQALAKAANVDYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTA 171

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V    D                V+W  E  Y FRLSA+Q++L
Sbjct: 172 KHEGWYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWSSETNYHFRLSAFQERL 231

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L  Y S  +FI P     +V+  + SGL DLS+SR  +   WGI +P D    +YVW+DA
Sbjct: 232 LELYRST-DFITPSNYMADVVKSISSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDA 290

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V  HG
Sbjct: 291 LINYLTKAGYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHG 350

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS GNV++P   I+  GVD +R+FL  +     D  YD   + +     L
Sbjct: 351 HWTINREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLL 410

Query: 355 ANGIGNLVSRSVSMI---LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             GIGNL  R++      L+ Y  D       A T  D    S+  +   ++ E M+   
Sbjct: 411 QWGIGNLTHRTIGCAKGNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPDKVAEQMEKLN 470

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL  +++++ + ++YF A +PW+     P  +   LY   E +R   ILLQ F+P  
Sbjct: 471 PRAALQDIMAIIEKTNKYFHAAEPWK----TPAGSQRALYNVAESLRISGILLQPFMPSK 526

Query: 470 ANKIFDILFV 479
           + ++ DIL V
Sbjct: 527 STELLDILRV 536


>gi|109947187|ref|YP_664415.1| methionyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714408|emb|CAJ99416.1| metS [Helicobacter acinonychis str. Sheeba]
          Length = 643

 Score =  339 bits (869), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 191/480 (39%), Positives = 292/480 (60%), Gaps = 20/480 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSAKL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     +             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNINNKVLCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +P   +DP++++YVW+DAL NY + 
Sbjct: 182 EVILPIYRKNEVTSFIEQGLLDLSITRTSFEWGILLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  +     F  A  H++GKDILRFHAIYWPAFL+S  LPL K++  HG+   +G 
Sbjct: 242 LGYLNGLENKMVHFECAR-HIVGKDILRFHAIYWPAFLMSLGLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-------QLIHRAL 414
           ++R + M  K ++        ++   E I +   + L+++ + + N         +H+AL
Sbjct: 361 LNRLLGMAKKYFN--------YSLKSEKITTYYPKELEKVHQILDNANSFVPKMQLHKAL 412

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++  +   +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 413 EELFGVYDFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKL 472


>gi|195446223|ref|XP_002070684.1| GK10894 [Drosophila willistoni]
 gi|194166769|gb|EDW81670.1| GK10894 [Drosophila willistoni]
          Length = 581

 Score =  338 bits (868), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 184/502 (36%), Positives = 276/502 (54%), Gaps = 26/502 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DVL  TGTDEHG KI +AA   
Sbjct: 22  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRHPNADVLLCTGTDEHGTKIQQAAAGH 81

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + D+ S+ +RD+     I  DDFIRTTE+RH       W+K+ D G IY   YS
Sbjct: 82  KVPVGQYCDEISQRYRDVFQAAHIQNDDFIRTTEERHKQAVSHFWRKLHDNGHIYSAAYS 141

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + +  
Sbjct: 142 GWYCVSDEVFLTDSQLRLDEASGMRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 201

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +P D    +YVW+DAL NYL++
Sbjct: 202 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDDSQTVYVWLDALVNYLSS 260

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+   AK WP    +IGKDIL+FH IYWPAFL++A L  P++++ H      G+
Sbjct: 261 LGY---PNEKFAKHWPPAQQIIGKDILKFHGIYWPAFLMAAGLEPPRQLYVHSHWTVDGQ 317

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  +E  ++ LRYFL+RE     DG Y      + +N++LA+ +GNL
Sbjct: 318 KMSKSKHNVVDPVKAAQEYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSELADTLGNL 377

Query: 362 VSRSVSMIL-----------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           +SR+ +  L           ++   ++    A    +ES+L +  R  Q    N      
Sbjct: 378 LSRACAKSLNPTQIYPALHSEELTELLHNLDAAKRLEESLLQLAERCQQHYECNH----F 433

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           H      ++ +   + +F++ KPWELK   N  R  T++ +T++V+R   I+LQ  +P+L
Sbjct: 434 HLVADTTMATLHAANNFFESSKPWELKGGINAQRLETIIGMTMDVLRLCGIVLQPIIPQL 493

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           A ++ D L +    RC+  L +
Sbjct: 494 ATQLLDKLSLPGSQRCWSRLSE 515


>gi|224008408|ref|XP_002293163.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220971289|gb|EED89624.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 554

 Score =  338 bits (868), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 191/495 (38%), Positives = 283/495 (57%), Gaps = 32/495 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-----DGLDVLFTTGTDEHGQKIAKA 61
            YI+TAI Y N   H+GHAYE    D +ARF RL     +G    F TG DEHG+KIAK 
Sbjct: 6   FYITTAINYTNGPAHMGHAYEAATTDAIARFARLKCSPENGDTAYFVTGADEHGEKIAKT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G       +     F+ +   + +S DD++RTT  RH  T + LW K +   DIY 
Sbjct: 66  AEKEGKEPIDICNTYVTGFQCLNQRILVSNDDYVRTTSDRHKRTAQALWLKCAANDDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYY--NAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
             YSGWY++++EA+  D E    A+   Y   A   P+Q ++E  YFF++S Y D+L+ +
Sbjct: 126 DQYSGWYNVKEEAFVTDSE----AELCNYIDEATGQPLQRVQEASYFFKMSNYHDRLVEH 181

Query: 180 YESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPD--DPQYIMYVWIDALT 236
            ESHPEFI P   RN +++ +    L+DLS+SR TF  GI +P+  +  ++MYVW DALT
Sbjct: 182 IESHPEFICPESHRNAILARLNGDRLRDLSVSRTTFTHGIPVPEGFEKNHVMYVWFDALT 241

Query: 237 NYLTTTGYLD--NPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           NYL+    L   N DGSK     K WPAD+H+IGKDIL FH + WP  L+SA +PLPK V
Sbjct: 242 NYLSGVNALGVCNEDGSKDEELVKLWPADVHIIGKDILWFHTVIWPCILMSAGIPLPKTV 301

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           F+HGF+  K G+K+SKS+GNV+DP +++++  VD+ R++L +E   G +  + +D ++  
Sbjct: 302 FAHGFVNDKEGKKMSKSVGNVVDPHDMLDKFDVDSFRWYLCKEAPYGGELSFSEDNMRDM 361

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQ 406
            NADL + +GN+V R   +  K  DG+I   P+P       E+ +     V +     M+
Sbjct: 362 HNADLCDTLGNMVHRVTKLCGKYCDGVIMDVPSP-------ETAVLDFDAVRKAYVAKME 414

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAF 465
              +       I    +V+ Y   ++PW+LK     ++   V+  T+E +  +A LL  F
Sbjct: 415 VMALEGGANIAIQACRDVNGYLTKEEPWKLKGDEFTEKRQVVVRATLEAVYAVAHLLLPF 474

Query: 466 VPKLANKIFDILFVA 480
           +PK A++I   +  A
Sbjct: 475 IPKGASEIMKKMNTA 489


>gi|212537687|ref|XP_002148999.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210068741|gb|EEA22832.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 583

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 274/492 (55%), Gaps = 17/492 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M++ DV+ R+ +L G  + +F TGTDEHG KI +AA
Sbjct: 54  KKPFYVTTPIFYVNAAPHVGHLYSMVLGDVIKRWQQLKGNTNAIFLTGTDEHGIKIQQAA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG+ T+ F D N + F+D+A    IS D FIRTT++ H D  R  W+ +  +G IY  
Sbjct: 114 QEAGMDTQSFCDMNCKTFKDLARAAKISNDHFIRTTDEAHKDAVRYFWESLQHRGYIYTK 173

Query: 123 CYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DEA+Y   +V        G            V+W  E  Y FRLSA++D+L
Sbjct: 174 KHEGWYSVSDEAFYPQSQVEPSLDPATGRKRMISTETGKEVEWSSEINYHFRLSAFKDRL 233

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L +YE +P+FIL       +   V++ L+DLS+SR  +   WG+++P D    +YVW+DA
Sbjct: 234 LEFYEQNPKFILAKNHMRHLKKTVEADLQDLSISRPVERLTWGVRVPGDDSQTIYVWLDA 293

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPADLH++GKDI+RFH IYWPAFL++ +LPLP+ V  HG
Sbjct: 294 LINYLTKAGYPFTPGKESDLGWPADLHIVGKDIVRFHCIYWPAFLMALDLPLPRHVLVHG 353

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                  K+SKS GNV++P   I+   VD +R+FL        D  Y+ + +       L
Sbjct: 354 HWTMNKAKMSKSTGNVVNPFFAIDRFSVDVMRFFLTLRGPLIDDSNYENNNIVNDYKKYL 413

Query: 355 ANGIGNLVSRSVSMI-LKDYDGMIPTPGAF-TESDESILSVCSRVLQE----IRENMQNQ 408
             G+GN+  R + +  LK    +      F TE++E+ +    + LQE    +   M+  
Sbjct: 414 QYGVGNVYQRLMGVARLKLRPSIDAAKSGFSTEANENDMEF-EKYLQELPAIVDRFMEAF 472

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
               AL +++    +   YF    PWE  K +  R + VLY   E +R   ILLQ F+P+
Sbjct: 473 NSKAALRELVDGAMKAQNYFHRSAPWE-HKDDLTRCARVLYNVSEFLRISGILLQPFMPQ 531

Query: 469 LANKIFDILFVA 480
            ++++ D + V+
Sbjct: 532 KSSELLDRIGVS 543


>gi|209881209|ref|XP_002142043.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209557649|gb|EEA07694.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 556

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 184/474 (38%), Positives = 270/474 (56%), Gaps = 14/474 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAI Y N  PHIGHAYE+I++D + R  R+ G +  F TGTDEHG K A  A N  
Sbjct: 32  FYLTTAINYINGVPHIGHAYEIIVSDAIVRIARIFGYNTRFMTGTDEHGLKNATVASNNN 91

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   D N   F++M   L+IS D FIRTT+K H+  C  +WK+  D GDIY G Y+G
Sbjct: 92  MTPKELCDLNVIKFKEMNKKLNISTDRFIRTTDKDHYKACEEIWKRCMDSGDIYLGIYTG 151

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WYS+++E +  + E        Y ++    P+  M+E  YFFRL+ Y   + ++   +P 
Sbjct: 152 WYSIKEETFVTELE---AKMTNYLDSITGTPLVKMDEPSYFFRLTKYLPSVHAHILENPN 208

Query: 186 FILPIERRNEVISFVKS--GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   R+ ++S + +     DLS+SR TF WG+ +P+DPQ++MYVW DALTNY+T   
Sbjct: 209 FIQPEILRDNILSRLDNMQNPADLSISRITFSWGVPVPNDPQHVMYVWFDALTNYITGLN 268

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           + +  +     +W   +H++GKDI  FH I WPA L+SAN+PLPK +F HGF+    G+K
Sbjct: 269 WPNEDNELWKTYWSNTIHIVGKDIAWFHCIIWPAMLMSANIPLPKTIFGHGFVTASDGKK 328

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSL NV+DP+E IE VG D  RY++ RE   G D  ++   +    N +LA+  GNLV
Sbjct: 329 MSKSLENVVDPLEQIELVGTDTFRYYICREGKFGYDFKFNTTSIVDYHNGELADSFGNLV 388

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLV 421
           SR+ ++  K   G++P   A   S +     C + + E      N+      AQ+ +   
Sbjct: 389 SRTTNLAHKFCGGIVP---AKLCSSKISKPFCPKGVLERYGYSWNKYRLEECAQISMHTC 445

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            EV+++     PW      T+ DR   ++ + +E I  LA L+  F P    +I
Sbjct: 446 REVNKFLTDNAPWNKSNDLTDEDRIE-IIRIVLESIYYLAHLMAPFTPNACEQI 498


>gi|85101208|ref|XP_961106.1| hypothetical protein NCU03759 [Neurospora crassa OR74A]
 gi|30580531|sp|Q9C2H9|SYMM_NEUCR RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|12718314|emb|CAC28665.1| probable METHIONYL-TRNA SYNTHETASE, mitochondrial [Neurospora
           crassa]
 gi|28922645|gb|EAA31870.1| hypothetical protein NCU03759 [Neurospora crassa OR74A]
          Length = 622

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 186/508 (36%), Positives = 293/508 (57%), Gaps = 24/508 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y++T I Y NA PH+GH Y M++ DVL R+  L G   +  TGTDEHG K+ +AA
Sbjct: 58  DNKPFYVTTPIFYVNASPHVGHMYSMVLGDVLKRWQTLKGNQAILCTGTDEHGTKVQRAA 117

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +  K F D NS  F+++A    I YD F+RTT++ H +  +  W  + +KG IY+ 
Sbjct: 118 IANDMDPKQFCDLNSAKFQELAAACRIDYDRFMRTTDQDHVEAVKHFWLLLKEKGLIYEA 177

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD---GQYYNA---QHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWY + DE +Y + ++ K  D   G+ Y A     N V+W+EE+ Y FR++A +D+L
Sbjct: 178 KHEGWYCVSDECFYPESQLEKRQDPFTGEVYVASIESGNKVEWIEEKNYHFRMTALKDQL 237

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
           L +Y+++P++I+P  R N+V+ +V + L+DLS+SR      WGI++PDD    +YVW+DA
Sbjct: 238 LEFYKNNPDWIVPQTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDDESQTIYVWVDA 297

Query: 235 LTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L NY+T  GY   P G +    WP D+HVIGKDILRFH IYWPA LL+ +LPLPK++ SH
Sbjct: 298 LINYITMAGYPYWPPGREHLGGWPVDVHVIGKDILRFHCIYWPALLLALDLPLPKRILSH 357

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                + +K+SKS+GNV++P   +E  G+D +R++++       D  Y  D L       
Sbjct: 358 AHWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMIHNGGIANDADYSNDWLTVEYKKH 417

Query: 354 LANGIGNLVSR-------SVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           L NG+GNL +R       S+   ++ Y DG +       + ++S +   +R L ++   +
Sbjct: 418 LQNGVGNLSARVTRPKQWSLRRAVQSYQDGNMLLQSTGEQINDSCVEHITR-LDKLASTI 476

Query: 406 QNQLIH----RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLA 459
            N+++      AL +++ L+ E + +    +PW + K     A    ++    E +R   
Sbjct: 477 DNEMLQLNPSHALQKIMGLIGETNAFISNAEPWVIVKKQDSEALVDRIILTAGESLRIAG 536

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQ 487
           ILLQ F+P  A ++ D+L V + NR F 
Sbjct: 537 ILLQPFMPDKAAQLLDLLGVENHNRTFH 564


>gi|328766262|gb|EGF76318.1| hypothetical protein BATDEDRAFT_14978 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 554

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/539 (35%), Positives = 299/539 (55%), Gaps = 38/539 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +YI++ I Y NA PHIGH Y  I+AD L R+    G   +++TGTDEHG KI +AA+ A 
Sbjct: 17  VYITSPIFYVNAVPHIGHLYSAILADSLKRWFEFKGQKTMYSTGTDEHGLKIQQAAEAAK 76

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K F +  S+ F+ +    DISY  FIRTT+  H++  + LW+ +   G +YKG + G
Sbjct: 77  SDPKEFCNDISKTFKSLFKKSDISYTRFIRTTDSDHYEAVKALWECLERGGFLYKGYHEG 136

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WY + DE +Y + ++   A        H        V+W +EE Y F+LSA++DK + + 
Sbjct: 137 WYCVSDETFYPESQIEASAADPSIMVCHISKESGKVVEWTKEENYKFKLSAFRDKTIEWL 196

Query: 181 ESHPEFILPIERRNEVISFVKSGLK-DLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++P+ I+P  + N V+S +K G + DLS+SR      WGI +P+D  +++YVW+DAL N
Sbjct: 197 KANPKVIVPESQYNFVLSQLKKGEQTDLSVSRLRSRISWGIPVPNDDTHVIYVWLDALVN 256

Query: 238 YLTTTGYLDNPDG-------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           YLT   Y   P         +    WPA +HV+GKDI++FHAIYWPAFL++A LPLP+K+
Sbjct: 257 YLTVAKYPWTPSKDVQMSEIAAQNGWPAHIHVVGKDIIKFHAIYWPAFLMAAGLPLPQKI 316

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            SHG  L   +K+SKS+GNV++P  +IE+ GVD +RYFL+R+     D  +    +  R 
Sbjct: 317 ISHGHWLMNHQKMSKSVGNVVEPNALIEKWGVDPVRYFLMRDGVINNDPEFSDKLIFSRY 376

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             DL + +GNLV R VS    +  G IP  T     ++    +   S +  ++ + M   
Sbjct: 377 KNDLGDQLGNLVMR-VSTPRINQSGEIPLATDEPLDDTGVKKMEQLSTLADQVDQCMIQG 435

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWEL-------KKTNPDRASTVLYVTVEVIRQLAIL 461
            +  AL  +  +++++++Y+   +PW++        K NP +  +VL+V  E +R  A+L
Sbjct: 436 NVADALQHIQEMIADLNKYWTDAEPWKMANAARSDSKPNP-KLQSVLFVAYEGLRICALL 494

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL----------DQRLKPGFMLHKTFDPIFPRF 510
           LQ  +P     + D L V    R F +           +   KP  +L K   P+FPR 
Sbjct: 495 LQPVMPTKMTNLLDTLDVDCTERTFFNAYPGKRYYHLKNTFKKPPTLLSKQ-PPLFPRI 552


>gi|328477979|gb|EGF47895.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 585

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 172/445 (38%), Positives = 274/445 (61%), Gaps = 11/445 (2%)

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136
           +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y G Y+GWYS+ DE Y+
Sbjct: 2   AAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVYLGEYTGWYSVEDEEYF 61

Query: 137 NDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            +    EVY+  DG+    +    + VQ + E  YFF++S Y D+LL YY+ HP+F+ P 
Sbjct: 62  TESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTDRLLKYYDEHPDFVQPA 121

Query: 191 ERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
            R+ E+I+ F+K GL+DL++SR +F+WG++IP DP++++YVW+DAL NY+T  GY  N  
Sbjct: 122 SRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVDALLNYITALGYGSNDH 181

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
               K+WPA++ +IGK+I+RFH IYWP  L++ +LPLPKK+++HG+++ K  K+SKS GN
Sbjct: 182 ALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAHGWLVMKDGKMSKSKGN 241

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            I P  ++E  G+DALRY+L+R I  G DG +  +    R+N DLAN +GNL++R+++MI
Sbjct: 242 AIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYDLANDLGNLLNRTIAMI 301

Query: 370 LKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            K  DG++P      T  D+ +  V    L +  + M       AL QV  +VS  ++Y 
Sbjct: 302 NKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSDALDQVWKIVSRANKYI 361

Query: 429 DAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  +PW+L K     D+  +V+    E +R +A+L+Q  +     +IF  L +  EN   
Sbjct: 362 DETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAPVQIFGQLGLDHENEDH 421

Query: 487 QSLDQRLKP-GFMLHKTFDPIFPRF 510
           + +     P G  + +   PIFPR 
Sbjct: 422 KVVKWGALPAGAKVVEQGTPIFPRL 446


>gi|167751097|ref|ZP_02423224.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702]
 gi|167656015|gb|EDS00145.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702]
          Length = 605

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 173/453 (38%), Positives = 277/453 (61%), Gaps = 8/453 (1%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DV+F TGTDEHGQKI   A   GVT K +VD+   NF+ + + + ISYD FIRTT+
Sbjct: 1   MQGYDVMFLTGTDEHGQKIELKAAEKGVTPKEYVDEIVANFKRLWETMHISYDRFIRTTD 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
             H +T + ++KK+ +KG IYKG Y G Y    E+++ + ++    DG+  +     V+ 
Sbjct: 61  DYHIETVQKIFKKLYEKGYIYKGTYKGKYCTPCESFWTESQL---VDGKCPDCGRE-VKE 116

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGI 218
             EE YF RLS + DK+  +  +  +++ P  R NE+++ F+K GL+DL +SR +F WGI
Sbjct: 117 ANEEAYFLRLSDFADKIEKFL-TETDYLQPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGI 175

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            +  D ++++YVW+DAL+NY++  GY +       K+WPAD+H+  K+I+RFH+I WP  
Sbjct: 176 PVDFDSKHVVYVWVDALSNYISALGYGNEKYNDFEKYWPADMHMTAKEIVRFHSIVWPII 235

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+  +LPLPK ++ HG+I   G+K+SKS GNV+DP  + E  GVDA+RY ++R++  G D
Sbjct: 236 LMMLDLPLPKHLYGHGWINFNGDKMSKSKGNVVDPFVLCERYGVDAVRYQILRDMPYGSD 295

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +  R+NADLAN +GNLVSR+V+M  K + G +PT     + D+ ++ +   + 
Sbjct: 296 CNFTNELMLTRINADLANDLGNLVSRTVAMADKYFGGTLPTDRVSDDLDDQLIGMAQSLC 355

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIR 456
             +   ++     +AL ++  ++S  ++Y D   PW L K  +N  R +TVLY  +E IR
Sbjct: 356 DTVTPLIEQAQHSKALEEIFKVISRANKYIDETAPWVLAKDESNNARLATVLYNLLETIR 415

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             + LL  F+P    ++++ +    E+  F  L
Sbjct: 416 ICSALLSPFMPATMPEVWEQIGAGAEDTAFDKL 448


>gi|302833559|ref|XP_002948343.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f.
           nagariensis]
 gi|300266563|gb|EFJ50750.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f.
           nagariensis]
          Length = 643

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 190/488 (38%), Positives = 276/488 (56%), Gaps = 14/488 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y NA PH+G AY  I ADV +RF RL G  V F TGTDEHG+KIA AA   G++
Sbjct: 71  ITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKIAAAASGRGLS 130

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D     + D+ D LDI YD F+RTTE R  +    +  +  ++GDIY   Y GWY
Sbjct: 131 PQEHCDDIVAQYTDLWDKLDIQYDRFVRTTESRLAELVVDVLVRCWERGDIYSADYEGWY 190

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +    E    +  +       P Q  +E  YFFRLS Y  K +    S  +F+ 
Sbjct: 191 CVDCEEFKGQSE----SQPRGCPTHRKPCQHRKEANYFFRLSKY-SKWIEELLSREDFVQ 245

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RRNE++S+V+ GL+D S+SR   DWGI++P DP++ +YVW DAL  YL+     D P
Sbjct: 246 PASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLLPPDVP 305

Query: 249 DGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
             +       WPA +HVIGKDILRFHAIYWP  LLSA LPLP++V+ HGF+   G K+ K
Sbjct: 306 ATTSEVPVHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPLPQRVYGHGFLTKDGLKMGK 365

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           +LGN +DP  ++   G DA+R + ++EI  G+DG + +   +  VNA LAN +GN ++R+
Sbjct: 366 ALGNTLDPRALVAAYGADAVRLYFMKEIVFGQDGDFSEVRFRDAVNAALANNLGNGLNRT 425

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++++ K +D  IP   +   +D  +  + +  L            H A   V++L S  +
Sbjct: 426 LNLLAKFHDRTIPVDASSLPADLPLRQMAAERLPAAASAYSALSFHEAAEAVLALASRSN 485

Query: 426 RYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +Y +  +PW   K   D     A+ VL   +E +R +A+ L A  P L+ +I+  L  ++
Sbjct: 486 QYLEETQPWTKLKKGSDEEKAEAAAVLVAVLEAVRIVAVGLVALTPGLSRRIYSQLGFSE 545

Query: 482 ENRCFQSL 489
           E   FQ+L
Sbjct: 546 EQ--FQAL 551


>gi|326482096|gb|EGE06106.1| methionine-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 592

 Score =  336 bits (862), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 185/498 (37%), Positives = 276/498 (55%), Gaps = 24/498 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +AA   G
Sbjct: 56  YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQAALQNG 115

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  +   D+N   F+ +A   + SYD FIRTT+  H    +  W+ ++ +G IY+G + G
Sbjct: 116 LEPQALCDRNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 175

Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE +Y    V+   D   G+   A       V++ +E  Y F+LSA+QD+LL +Y
Sbjct: 176 WYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRLLEHY 235

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+FI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+DAL NY
Sbjct: 236 RKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 295

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H     
Sbjct: 296 ITYAGYPFTPGREQESIWPADIHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 355

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     L  G+
Sbjct: 356 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGL 415

Query: 359 GNLVSRSVS----MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----I 410
           GNL SR +      + +    M    G+    D S +      L+++   + NQ+     
Sbjct: 416 GNLCSRVMRGKGWNVRESVVKMANGQGSRRAKDPSEIEHM-EFLEKVPGLVSNQMDELNP 474

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQA 464
            RAL +++ ++ + +RY  +  PW L K   T+P   D+   V+Y   E +R   ILLQ 
Sbjct: 475 RRALEEIVKIIDQTNRYVQSTGPWNLAKEASTDPTAHDQLVGVIYNATESLRIAGILLQP 534

Query: 465 FVPKLANKIFDILFVADE 482
           F+P+ A K+ D+L V ++
Sbjct: 535 FMPEKAKKLLDMLGVEED 552


>gi|219117325|ref|XP_002179457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409348|gb|EEC49280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 643

 Score =  335 bits (860), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 281/482 (58%), Gaps = 22/482 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAA 62
           +   Y++TAI Y N   H+GHAYE   +DV+ R+ RL G   V F TG DEHGQKIA+ A
Sbjct: 106 KSSFYLTTAINYTNGPAHMGHAYEAATSDVIVRYQRLLGTHPVYFVTGADEHGQKIAQTA 165

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            +AG       DQ    F+ +   + I+ DD++RTT  RH    + LW++ +D GDIY  
Sbjct: 166 ADAGKVPIDICDQYVTGFQVLNQRILIANDDYVRTTSARHKQLAQTLWQRCADAGDIYLD 225

Query: 123 CYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YSGWY++R+E +  D E     YK            P++ +EEE YFF++S Y  +L++
Sbjct: 226 TYSGWYNVREETFVTDMEAQQLDYKDPTSGL------PLKQVEEESYFFKMSKYHAQLVA 279

Query: 179 YYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDAL 235
           + ES+PEFI P   RN++++ + +  L+DLS+SR TF WGI +P +    ++MYVW+DAL
Sbjct: 280 HIESNPEFIQPDAHRNQILARLHTDELRDLSISRTTFSWGIPVPQNFKNNHVMYVWVDAL 339

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NYLT   Y  +       FWPA +H+IGKDIL FH + WP  LLSA +PL  +VF+HGF
Sbjct: 340 SNYLTGIDYFGHQGTLLKSFWPASVHIIGKDILWFHTVIWPCLLLSAGIPLAHQVFAHGF 399

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  + G+K+SKSLGNV+DP +++++  VD  R++L +E   G +  + ++ ++   NADL
Sbjct: 400 VNDREGKKMSKSLGNVVDPHDMLDKFDVDTFRWYLCKEAPFGGELSFSEESMRDMHNADL 459

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            + IGNLV R+ ++  K  DG++P     T    ++ S    V++  +  M    +    
Sbjct: 460 CDTIGNLVHRATNLCQKYCDGVVPDVPPPTNPPINLAS----VIKTFQARMDKLELQAGA 515

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANK 472
             VI    +V+ +   + PW LKK +    +  + V   +E I  L+ LL  F+P+   K
Sbjct: 516 TVVIGAFRDVNGFLQEEAPW-LKKGDEHTETRRITVRACLEAIYALSHLLLPFLPQSMLK 574

Query: 473 IF 474
           +F
Sbjct: 575 VF 576


>gi|50364851|ref|YP_053276.1| methionyl-tRNA synthetase [Mesoplasma florum L1]
 gi|50363407|gb|AAT75392.1| methionyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 509

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 277/478 (57%), Gaps = 13/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I YP+   HIGHAY   +AD+L R+  + G +  F TG+DEHGQKI + A  
Sbjct: 3   KKFYVTTPIYYPSGNLHIGHAYTTTLADILKRYKDMQGYETFFLTGSDEHGQKIEEKATE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T   +++    +F+ +   L I Y  FIRTT+  H +T + ++  + DKG IYKG Y
Sbjct: 63  AGLTPIDYLEDKVESFKTLWKALKIDYTKFIRTTDSYHEETVKKIFTLLLDKGFIYKGNY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E + N D++ +    +  N +   ++ ++EE YF + S +Q+  +       
Sbjct: 123 EGLYCISCEEFLNADQIDENNMCKISNTK---LELVKEETYFLKTSLFQE-FMENEVLAS 178

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EF++P  RRNE++ SFVK  LKDLS++R +F WGI I +DP++++YVW+DALTNY+T  G
Sbjct: 179 EFLIPAYRRNEMLNSFVKPELKDLSVTRTSFSWGIPINEDPKHVVYVWLDALTNYITALG 238

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL N D +  KFW  +    L + GK+I+RFH+IYWP  L S  L  P  +  HG+IL K
Sbjct: 239 YLQNDDSNFQKFWADENTEILQLAGKEIIRFHSIYWPIILKSLGLRQPTHLLGHGWILSK 298

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDPIE+I + G DALR+++  E+   KDG +  D   +  NA LAN +G
Sbjct: 299 DTKMSKSLGNVIDPIEMINKYGADALRFYIGYELPTEKDGNFTDDLFIESFNAHLANNVG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR   MI K +DG I         D+++ +     +    +NM    I  A+  ++ 
Sbjct: 359 NLISRINQMITKYFDGFIENDNIV--YDDNLTAKGIETINLYIQNMDQYKISDAIRNILD 416

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  ++Y +   PW L K   ++   +  V   + R ++I++    P L     D++
Sbjct: 417 LGNACNKYIEETMPWNLAK--EEKIDELKNVMATLQRNISIMVFLLKPILVENYEDMI 472


>gi|327304271|ref|XP_003236827.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459825|gb|EGD85278.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 641

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 184/498 (36%), Positives = 273/498 (54%), Gaps = 24/498 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +AA   G
Sbjct: 105 YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQAALQNG 164

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  +   D+N   F+ +A   + S+D FIRTT+  H    +  W+ ++ +G IY+G + G
Sbjct: 165 LEPQALCDRNCETFKVLAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 224

Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE +Y    V+   D   G+   A       V++ +E  Y F+LSA+QD+LL +Y
Sbjct: 225 WYSVSDETFYPASAVHSTLDPATGRKLMASIETGKEVKFSQETNYHFKLSAFQDRLLEHY 284

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +PEFI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+DAL NY
Sbjct: 285 RKNPEFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 344

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H     
Sbjct: 345 ITYAGYPFTPGREQESIWPADVHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 404

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     L  G+
Sbjct: 405 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGL 464

Query: 359 GNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           GNL SR +          ++K  DG      A  +S+   +    +V   +   M     
Sbjct: 465 GNLCSRVMRGKGWNVRESVVKMTDGQ-GNRRAKDQSEIEHMEFLEKVPGLVSNQMDELNP 523

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQA 464
            RAL +++ ++ + +RY  +  PW L K   T+P   D    V+Y   E +R   ILLQ 
Sbjct: 524 RRALEEIVKIIDQTNRYVQSTGPWNLAKEAGTDPMAYDLLVGVIYNATESLRIAGILLQP 583

Query: 465 FVPKLANKIFDILFVADE 482
           F+P+ A K+ ++L V ++
Sbjct: 584 FMPEKAKKLLNMLGVEED 601


>gi|322434798|ref|YP_004217010.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162525|gb|ADW68230.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 848

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 218/631 (34%), Positives = 306/631 (48%), Gaps = 137/631 (21%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PHIGHAY  I+ADVLAR  R  G    F TGTDEHGQKI ++A  AG
Sbjct: 8   FYVTTPIYYVNARPHIGHAYTTIVADVLARRARAQGTPTWFLTGTDEHGQKIERSALAAG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  + F DQ S +FRD+   + I+ D +IRTT++ H    + L+  +  KG IY   Y+G
Sbjct: 68  IPPQTFTDQVSASFRDLWKRMGITNDQYIRTTDEAHKKGVQKLFADLHAKGQIYLSTYTG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +        G DG+       P + + EE +FFRLS YQ  LL+  ES    
Sbjct: 128 QYSIGEEMFVEGPPGTIGPDGK-------PTETVTEENFFFRLSDYQLPLLNLIESDTLK 180

Query: 187 ILPIERRNEVISFVK------------------------------SGLKDLSLSRKTFDW 216
           I P  R+NEV+SF++                                LKDLS+SR +F W
Sbjct: 181 ITPEARKNEVLSFLRGNTSGAPGPDSGTWVSTDLKQSAKGILYLPGALKDLSVSRSSFTW 240

Query: 217 GIKIPDDP------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           GI +P+        ++++YVW+DAL NY+T  GY  +      KFWPAD+H++GK+I+RF
Sbjct: 241 GIPVPEPAASEAKEKHVIYVWLDALANYITALGYGSDDTTQFEKFWPADIHLVGKEIIRF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI------------------- 311
           H +YWPAFLL+A L LPK V +HG++L    K+SKS GN++                   
Sbjct: 301 HCVYWPAFLLAAGLDLPKAVTAHGWLLFDDSKMSKSKGNIVRTETILDAFGTLLPPPAAL 360

Query: 312 --------------DPIEVIEEVG----------------------VDALRYFLVREIAC 335
                          P+   E  G                       D LRYFL+REI  
Sbjct: 361 TSDALALGIRGGLQPPVNGTENEGALAPGSPTPPPEPTKQDQDLFAADVLRYFLLREIPF 420

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--------- 386
           G+DG +  + L  R NADLANG GNLVSR+++MI K +DG++P     + S         
Sbjct: 421 GQDGSFTFEALITRYNADLANGYGNLVSRTLNMIHKYFDGVVPPSWVSSNSVVLESSVKE 480

Query: 387 ---------DESILSVCSRVLQE-------IRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                    D S  +  +R+  E       +  N Q    ++AL     L+  +D    +
Sbjct: 481 SQLFDRFVNDNSSGTWVTRLPSEAVALSLAVGRNTQLLRFNKALEACSELIRLLDSDLTS 540

Query: 431 QKPWEL------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--- 481
           + PW++       +    RAS VLY   E IR +  LL   +P    K++  L + D   
Sbjct: 541 KAPWKVIVGLSDDEMQEKRAS-VLYTAAESIRIITALLHPILPYATAKVWHQLGLGDIEL 599

Query: 482 --ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
              N   ++L    L+PG  L     PIFPR
Sbjct: 600 AAANGELKNLTWGGLQPGTKLGP-LSPIFPR 629


>gi|323451615|gb|EGB07492.1| hypothetical protein AURANDRAFT_71802 [Aureococcus anophagefferens]
          Length = 820

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 172/390 (44%), Positives = 236/390 (60%), Gaps = 20/390 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAI Y N  PH+GHAYE ++ DV+AR+ RL G +  F TG DEHGQKIA  A   G
Sbjct: 105 FYVTTAINYANGSPHMGHAYEALVTDVVARYWRLWGAETHFLTGADEHGQKIANTAAKEG 164

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
                 VD+    F+ +   LD+SYDD++RTT +RH   CR LW++ S  GD++   Y G
Sbjct: 165 KRPIELVDECVAKFKALDARLDVSYDDYLRTTSERHKACCRELWRRCSASGDVFLERYDG 224

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WY  R E +       K +D Q  N   A   P++   EE YFF+L  Y   + ++  ++
Sbjct: 225 WYDERAECF------VKASDAQLQNFCDADGIPLKRTSEECYFFKLGKYAPAIRAHVLAN 278

Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIKIPD--DPQYIMYVWIDALTNYL 239
           P F+ P  RR EV+  +     ++ LS+SR TFDWG+ +P+  D  ++MYVWIDALTNY+
Sbjct: 279 PHFVEPESRRKEVLLMLDDAEDIEKLSISRTTFDWGVGLPEGFDAGHVMYVWIDALTNYV 338

Query: 240 TTTGYL------DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           T  G L       +P    A  WPAD+HVIGKDI+RFHAIYWPAFL+SA LPLP+ VF H
Sbjct: 339 TGAGGLAEKKAAGDPCLEAAGKWPADIHVIGKDIVRFHAIYWPAFLMSAGLPLPRSVFCH 398

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           GF+L   G K+SK+LGNV+DP  +++  G D+ RYF V++ + G D  + +  L    N 
Sbjct: 399 GFVLDAAGTKMSKTLGNVLDPNALLDAHGSDSFRYFCVKDASPGADVKFSETSLILAHNN 458

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           +LA+  GNLV R+ +       G +P P A
Sbjct: 459 ELADAFGNLVHRATAFAQSKCGGKVPAPQA 488


>gi|297669110|ref|XP_002812749.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1
           [Pongo abelii]
          Length = 613

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 188/511 (36%), Positives = 274/511 (53%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 64  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      DQ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 124 ATAGLAPTELCDQVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 183

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G  +       +PV W +EE Y FRLS +++ L 
Sbjct: 184 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFREPLQ 243

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 244 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 303

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H  
Sbjct: 304 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 360

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 361 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 420

Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +   + Y     T     PG    S      D +++S  + + +++
Sbjct: 421 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 480

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 481 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 540

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 541 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 571


>gi|258591914|emb|CBE68219.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [NC10
           bacterium 'Dutch sediment']
          Length = 646

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 281/483 (58%), Gaps = 19/483 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFH--RLDGLDVLFTTGTDEHGQKIAKAA 62
           +  Y++T I Y NA PH+GHAY  I+AD +ARF   RL    V F TGTDEHG KI +AA
Sbjct: 4   QTFYLTTPIYYVNATPHLGHAYTTILADTMARFKKLRLGPEQVYFLTGTDEHGDKIVQAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G + + + D+ S  F++    L ++ + FIRTT + H    +   ++I D GDIY G
Sbjct: 64  AQGGESPQAYADRISGIFQETWKRLGLAPNQFIRTTSEPHKRAVQRFLQQIYDAGDIYFG 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E +Y + E+    D +  + Q  P  +++E+ YFFR+  YQ+ L+ +   
Sbjct: 124 EYGGHYCFGCERFYTEKEL---QDSKCPDHQTVPA-FIKEQNYFFRMGKYQEWLIDHIHR 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
           H +FI P   RNEV+SF+K  L+DL +SR +   +WGI +P D +Y+ YVW DAL NY++
Sbjct: 180 HADFIRPERFRNEVLSFLKEPLEDLCISRPSTRLEWGIPLPFDDRYVTYVWFDALINYIS 239

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
               LD PDG    +FWP+  H+I KDIL+ HAIYWP  L +A LP  + +  HG+   +
Sbjct: 240 A---LDWPDGEAFRRFWPSAQHLIAKDILKPHAIYWPTMLKAAGLPPYRHLNVHGYWKIE 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS G+V+ P+++ ++ GVDA RYF++RE+  G D  + +D L  R+NADLAN +G
Sbjct: 297 EAKMSKSRGSVVRPLDLADKYGVDAFRYFVLREMTFGLDAGFSEDALVARLNADLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL SR + +I + Y G+I  TPG     D  +       + ++   M+      ALA + 
Sbjct: 357 NLYSRVLKLIQRYYGGIITHTPG-----DGDLAEAARVAVTDVMAAMERFAFSEALAAIW 411

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +LVS  ++Y    +PW+    +P +   +L    E +R +A LL  F+P+ A+++   L 
Sbjct: 412 NLVSATNKYLVHNEPWKRDPGDP-QTKAILVTAAETLRTIATLLLPFLPQTADRMLRGLG 470

Query: 479 VAD 481
           + +
Sbjct: 471 ITE 473


>gi|194246768|ref|YP_002004407.1| methionyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807125|emb|CAP18563.1| Methiony-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 517

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 190/491 (38%), Positives = 289/491 (58%), Gaps = 17/491 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAY +  PH+G+ YE+++AD LARF RL+G DV F TGTDEHGQKI + +++  
Sbjct: 13  FYLATAIAYASDIPHVGNVYEVVLADFLARFKRLEGYDVYFQTGTDEHGQKIFQKSKSKN 72

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + +VD  S+  R + D++++SYD FIRT+++ H  + + +  K+  K DIY G Y G
Sbjct: 73  QKPQTYVDYFSQEIRRIYDLMNVSYDKFIRTSDENHKKSVQSVLDKLYQKKDIYLGKYEG 132

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YS+ +E+Y  + ++  G       +   P+ W  EE YFF+LS YQ KL  + ++    
Sbjct: 133 FYSVIEESYVLEKDLVNGLT----KSGEIPI-WNSEEVYFFKLSKYQKKLYDFLKNDSVL 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P+ ++ E+++ +K  L DL ++R    +GI +  + Q+ +YVW+DAL NY+T   Y  
Sbjct: 188 IRPVNKKQEILNLLKEPLPDLCITRTFCKYGINLNFNSQHFVYVWVDALLNYITGLNY-- 245

Query: 247 NPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +PD  K+    K+WP D+H+IGKDI+RFH +++   L+S  LPLPK  F H FIL    K
Sbjct: 246 HPDLPKSKEFLKYWPCDIHIIGKDIIRFHLVHFLILLISLELPLPKIFFVHPFILFDKNK 305

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+   ++++   VD +RYF++ EI   +DG    + L++R N DLAN IGNL+
Sbjct: 306 MSKSKGNVLYIDDLLKTFSVDTIRYFMLHEIPYNQDGNITHELLRERHNTDLANTIGNLL 365

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCS-RVLQEIRENMQNQLIHRALAQVISLV 421
           +R++ M LK Y           E  E  LS  S   L  I++ + N  I  A+  +I L 
Sbjct: 366 NRTLGM-LKAYRNGHLKKVILPEILEIDLSKKSLEALPLIQKKVFNFHISDAIEVIIQLA 424

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D  KPW L K +   D    VLY  +E +R + +LLQ F+P  A  I     +
Sbjct: 425 RFSNKYIDLAKPWILFKESDKQDVLDHVLYSLIETLRFIGVLLQPFLPTTAKSILKQ--I 482

Query: 480 ADENRCFQSLD 490
             EN  F SL+
Sbjct: 483 KSENNTFASLE 493


>gi|218777886|ref|YP_002429204.1| methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218759270|gb|ACL01736.1| Methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 643

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 199/516 (38%), Positives = 286/516 (55%), Gaps = 23/516 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  I+AD   R+H+L G D  F TGTDEHG K+ +AA+   
Sbjct: 5   FYITTPIYYVNARPHLGHAYTTIVADTAKRYHQLRGQDAYFLTGTDEHGDKVVEAAEKEN 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + +VD  S  FR++   L IS D FIRTT+  H    + + +KI D GDIY   Y G
Sbjct: 65  KEVRDYVDMISGLFRNLWPELLISNDQFIRTTDADHIKVVQEVLQKIYDNGDIYFSEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y + E+    DG+  + +  P + ++E  YFFR+S YQD L+ + + +P F
Sbjct: 125 LYCFGCERFYLEREL---VDGKCPDHEVEPKK-IKESNYFFRMSKYQDWLIDHIKKNPGF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P    NEV+SF+K  L+DL +SR KT   WGI +P D  Y+ YVW DAL NY +  GY
Sbjct: 181 IRPQRYANEVLSFLKEPLEDLCISRPKTRLTWGIDLPFDENYVTYVWFDALLNYASALGY 240

Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              P+G K  K+WP   HV+ KDIL+ H IYWP  + +A +P+   +  HG+      K+
Sbjct: 241 ---PEGEKFQKYWPGVQHVVAKDILKPHGIYWPTMMKAAGIPVYNHLNVHGYWNVADSKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++P+E+ ++ G++  RYFL+RE+  G D  + ++ L  R+N+DLAN +GNL S
Sbjct: 298 SKSLGNVVEPLELSKKYGIEQFRYFLMREMTFGLDSSFSEEALVGRINSDLANDLGNLFS 357

Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           R +SM  K   G +P   P    +SD  +       ++     M     H+ LA V   +
Sbjct: 358 RVISMAHKFCKGTVPENHPDLAFDSDWKLSDAAMEAVEAYDLAMDEFQFHKGLAAVWEFI 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-- 477
           S +++Y D   PW L K     A    V+Y  +E +R +A ++   +P  A K+   L  
Sbjct: 418 SRMNKYVDFTSPWVLAKDKAAAAQLEAVMYNLLEGLRLVAGMVWPVLPNAAEKMVGHLGL 477

Query: 478 ----FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               F+ D     +     LKPG  L K    +FPR
Sbjct: 478 DKDAFLKDSAALGEW--GVLKPGTQLQKAVT-LFPR 510


>gi|315045362|ref|XP_003172056.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342442|gb|EFR01645.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 592

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 183/497 (36%), Positives = 269/497 (54%), Gaps = 22/497 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +AA   G
Sbjct: 56  YVTTPIFYVNAAPHIGHLYTILIADILKRWQVLIGNGDAKLLTGTDEHGMKIQQAALQNG 115

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  +   D+N   F+ +A   + S+D FIRTT+  H    +  W+ ++ +G IY+G + G
Sbjct: 116 LEPQALCDRNCETFKILAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 175

Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE +Y    V+   D   G+   A       V++ +E  Y F+LSA+QD+LL +Y
Sbjct: 176 WYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRLLEHY 235

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +P F+ P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+DAL NY
Sbjct: 236 HKNPNFVRPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNY 295

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY   P   +   WPAD+ V+GKDI RFH IYWPAFL++ +LPLP+ + +H     
Sbjct: 296 ITYAGYPFTPGREQESIWPADVQVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTM 355

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     L  G+
Sbjct: 356 NHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGL 415

Query: 359 GNLVSR-------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           GNL SR       +V   +    G   +  A   S+        +V   +   M      
Sbjct: 416 GNLCSRVMRGKGWNVRESVARMTGGQRSGNAKDPSEIEHKEFLEKVPALVSNQMDELNPR 475

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQAF 465
           RAL +V+ ++ + +RY  +  PW L K   TNP   DR   V++   E +R   ILLQ F
Sbjct: 476 RALEEVVKIIDQTNRYVQSTGPWNLAKDAATNPIAHDRLVGVIFNATESLRIAGILLQPF 535

Query: 466 VPKLANKIFDILFVADE 482
           +P+ A K+ D+L V ++
Sbjct: 536 MPEKAKKLLDMLGVEED 552


>gi|119500964|ref|XP_001267239.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119415404|gb|EAW25342.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 572

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 182/474 (38%), Positives = 260/474 (54%), Gaps = 19/474 (4%)

Query: 20  PHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78
           PH+GH Y M+I D+L R+  L G  D    TGTDEHG KI +AA  AG+  + F D N +
Sbjct: 66  PHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAASAAGMDPQAFCDMNCK 125

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
            F+ +A   ++ YD FIRTT+  H +  +  W+ ++ +G IY   + GWYS+ DE +Y  
Sbjct: 126 TFQALAKAANVDYDHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEGWYSVSDETFYPP 185

Query: 139 DEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
            +V    D      +         V+W  E  Y FRLSA+Q++LL  Y+S  EF+ P   
Sbjct: 186 TQVQNSLDPSTGRKRMVSVETGKEVEWSSETNYHFRLSAFQERLLELYKST-EFVTPGNY 244

Query: 193 RNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
             +++  V SGL DLS+SR  +   WGI +P D    +YVW+DAL NYLT  GY   P  
Sbjct: 245 MADLVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDALINYLTKAGYPFPPGQ 304

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
                WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V  HG      EK+SKS GNV
Sbjct: 305 EGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHGHWTINREKMSKSTGNV 364

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI- 369
           ++P   I+  GVD +R+FL  +     D  YD   + +     L  GIGNL  R++    
Sbjct: 365 VNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLLQWGIGNLTHRTIGCAK 424

Query: 370 --LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             L+ Y  D       A T  D    S+  +  + + E M+      AL  ++ ++ + +
Sbjct: 425 GNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPERVAEQMEKLNPRAALQGIMVIIEKTN 484

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +YF A +PW+     P  +  VLY   E +R   ILLQ F+P  +N++ DIL V
Sbjct: 485 KYFHAAEPWK----TPAESQRVLYNVAESLRISGILLQPFMPSKSNELLDILRV 534


>gi|67624509|ref|XP_668537.1| methionine -- tRNA ligase [Cryptosporidium hominis TU502]
 gi|54659719|gb|EAL38284.1| methionine -- tRNA ligase [Cryptosporidium hominis]
          Length = 562

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 184/519 (35%), Positives = 289/519 (55%), Gaps = 24/519 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y +TAI Y N  PH+GHAYE++ +D+L R  RL G +  F TGTDEHGQKIA  A+  G+
Sbjct: 17  YFTTAINYTNGTPHMGHAYEIVTSDILVRIARLFGFNTRFQTGTDEHGQKIAATAEKKGI 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K   D+N + F++M + L IS D FIRTT+  H+++C+ LW++   KGDIY G Y+GW
Sbjct: 77  SPKELCDENVKQFKNMNEKLQISTDRFIRTTDTDHYESCKELWRRCEAKGDIYLGKYNGW 136

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           Y++R+E++  + E    A    Y    +  P+  MEE  YFFR++ Y + + ++   +PE
Sbjct: 137 YNVREESFMTELE----AKMLNYTDPISGLPLTKMEEPSYFFRITNYLESIKNHIIDNPE 192

Query: 186 FILPIERRNEVISFVK---SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P   R  +++ ++   S  +DLS+SR +F WG+ +P+D +++MYVW DALTNY+T  
Sbjct: 193 FIQPESSRESILARLEALGSNSEDLSISRASFSWGVPVPNDQEHVMYVWFDALTNYITGL 252

Query: 243 GYLD-----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            + D       +    K+W   +H++GKDI  FH++ WPA LLS  L LPK +F+HGF+ 
Sbjct: 253 KWADFDNDLEENSLFNKYWENTVHIVGKDITWFHSVIWPAMLLSVGLSLPKTIFAHGFVT 312

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKSLGNV+DP E I+++G D  RY+L RE   G D  Y    +    N +LA+
Sbjct: 313 APDGKKMSKSLGNVVDPFEQIDKMGSDPFRYYLAREGRFGNDIKYQPSSVLDYNNGELAD 372

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             GNL+SR  ++  K   G+ P+       D+ +     +V +E         I      
Sbjct: 373 TYGNLISRITNLTHKFCQGVAPSLSQSLLLDKPV--DIDKVFEEYYLAWHCFRIDECTQI 430

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + L   V+++     PW       D     ++ + +E    ++ILL  F+     ++F+
Sbjct: 431 AMDLSRNVNKFLTDHAPWNKDNGKSDEERIEIIRIVLEGSYYISILLSPFITLACKEVFN 490

Query: 476 ILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRFL 511
            L   +  +    +D     +KPG  +    +P+F R +
Sbjct: 491 RLGTPE--KIIPEVDINYNNIKPGTPIL-IGEPLFKRIV 526


>gi|297153868|gb|ADI03580.1| methionyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 507

 Score =  332 bits (852), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 272/482 (56%), Gaps = 21/482 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y NA+PH+G A E++ AD LAR HR  G  V   +GTD++  K   AA+ A
Sbjct: 5   RRYITTTIPYVNARPHLGFALELVQADTLARHHRRRGEQVRLLSGTDDNSLKNVLAAEAA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124
           G   + FVD+N+  F  +   L +S+DDFIRT+ + RH      LW++ +  GD+Y+  Y
Sbjct: 65  GTDVQSFVDRNADAFAALRGPLALSFDDFIRTSSDPRHRVGVERLWRRCAASGDLYRREY 124

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y  DE+  G  G++        Q + EE +FFRLS Y  +L     S  
Sbjct: 125 EGLYCVGCEQFYTPDELVDGRCGEHGTEP----QLVTEENWFFRLSRYAGRLHQLISSGD 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             I P+ RRNEV++ V+ GL D S+SR   +   WGI +P+DP  ++YVW DAL NY+T+
Sbjct: 181 LRIEPVARRNEVLALVEGGLHDFSVSRSHSRARGWGIPVPEDPSQVVYVWWDALGNYVTS 240

Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY  + D +  ++W      +H++GK ++RFHA+YWPA LLSA LPLP  +  H ++  
Sbjct: 241 LGYGTD-DTAYDQWWATSERRVHLVGKGVVRFHAVYWPAMLLSAGLPLPTDILVHDYLTV 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G KISKS G  +DP  +    G DA+R++L+R++    D  +  D L  R +AD A G+
Sbjct: 300 DGRKISKSAGTTVDPAALAAAHGTDAVRWWLLRDVPRIGDADFTPDRLTGRADADFAGGL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL+ R V+M+ +   G +P   +   S  +++ VC +V   +   + +    RA+  V 
Sbjct: 360 GNLIHRIVTMVHRFRGGTVPV--SAPSSGLALVDVCRKVPGLVDAALADFDFRRAIRAVW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTN-------PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           ++V E +R  DA +PWEL +           R  TVL   V   R LA  L++F+P  A 
Sbjct: 418 NIVEEANRCIDATRPWELARAERQGDGEAAKRLDTVLVTLVTACRVLADELRSFIPDAAT 477

Query: 472 KI 473
           +I
Sbjct: 478 RI 479


>gi|298529104|ref|ZP_07016507.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510540|gb|EFI34443.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 640

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 182/516 (35%), Positives = 290/516 (56%), Gaps = 21/516 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  ++ST I Y NA+PH+GHAY  I+AD + R HRL   D  F TGTDEHG KI +AA+ 
Sbjct: 2   ESFFVSTPIYYVNARPHLGHAYTTIVADSINRLHRLRQKDTFFLTGTDEHGDKIVEAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K + D+ S  F++    L++    FIRTT+  H    +     + + GDIY G Y
Sbjct: 62  NGLAPKEYADRISALFKEAWPWLEVENSAFIRTTDPEHVKCVQRFLNTVYENGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG   +    P ++++EE YFFR++ Y   L  +  +HP
Sbjct: 122 GGHYCFGCECFYMEKEL---QDGLCPDHLEKP-RYLKEENYFFRMTRYLPALREHILNHP 177

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EFI P   RNEV+  +   L DL +SR      WGI++P D  ++ YVW DAL NY++  
Sbjct: 178 EFIQPERYRNEVLGMLGDELTDLCISRPKSRLTWGIELPFDSNFVTYVWFDALINYISAL 237

Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           G+   P G   K +WP   H++ KDIL+ HA++WP  L+SA + L + +  HG+   +  
Sbjct: 238 GW---PHGEAFKRYWPGAYHLVAKDILKPHAVFWPTMLMSAGVDLYQGLRVHGYWTVQEA 294

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P++++++ G+   RYFL+RE+  G D  + ++ L  R+N+DLAN +GNL
Sbjct: 295 KMSKSLGNVVQPMDMVDKYGLAPFRYFLLREMQFGLDASFSEEALVNRLNSDLANDLGNL 354

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR+++M  K + G++P     ++ D+ ++      L E      +    + L+ + + +
Sbjct: 355 CSRTLAMTNKYFQGLVPEKSGLSQEDQEVVDAGLTALDEYVRLFGDFQFSKGLSVLWAFI 414

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++Y DA  PW L K+   +R   V+YV +E +R++A+ L   +P  + ++   L   
Sbjct: 415 GRLNKYVDASAPWVLYKEGQTERLQNVMYVLLEGLRKIALHLWPVMPSSSEELLSQLGTG 474

Query: 481 -DENRCFQSLDQR------LKPGFMLHKTFDPIFPR 509
            D ++    L+Q       LKPG  + K  + +FPR
Sbjct: 475 FDLHKV--DLEQEAGHWSGLKPGVRVAKKSN-LFPR 507


>gi|42560572|ref|NP_975023.1| methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|42492068|emb|CAE76665.1| Methionine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320800|gb|ADK69443.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 509

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 177/478 (37%), Positives = 281/478 (58%), Gaps = 14/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I YD FIRTT+  H  T + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHEKTVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++ +    +  N +    Q + E  YF ++S +Q+ + +  +S  
Sbjct: 123 EGIYCVSCEEFLTNEQIDENGLCKISNTKP---QLVNENTYFLKVSQFQEFVQNILKS-- 177

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EF++P  RRNE++ +FV+ GLKDLS++R  F WGI I  D ++I+YVW+DAL+NY+T  G
Sbjct: 178 EFLIPEYRRNEMLKNFVEPGLKDLSITRVNFKWGIPITQDQKHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLETLNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGN+IDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNIIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I       + D+ ++ +  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNN--IKYDQELIDLGIKTIDNYIFNMDQYKISEAIKVVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  ++Y + + PW L+K N  R   +  V   + R +AI+     P L N   D++
Sbjct: 416 LSNACNKYIEIKTPWNLEKEN--RIEELKTVLATLQRNIAIISYLLKPVLVNSYTDMI 471


>gi|145346883|ref|XP_001417911.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578139|gb|ABO96204.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 591

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/521 (36%), Positives = 295/521 (56%), Gaps = 28/521 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I Y N QPHIGH Y   +AD  AR+ R  G DV F TGTDEHG K+ ++A+  G+
Sbjct: 67  FVTTPIYYVNDQPHIGHVYTSTVADAYARYRRARGEDVFFLTGTDEHGLKVEQSAEKRGI 126

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             +   D+NS+ FRD+    DIS+D+FIRTT+  H    R L K + +K  +Y G + GW
Sbjct: 127 EPQALADENSQKFRDVMTAYDISFDEFIRTTDDYHERQVRALVKVLQEKDAVYLGRFEGW 186

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E YY + +  K  D +   +  + V+   EE Y+FRLS +Q +L + +  +P+F+
Sbjct: 187 YDEGQEEYYTESKA-KELDYKSPISGKDMVR-SSEENYYFRLSKFQKELEALHADNPDFL 244

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNE+I  +  GL D+ +SR  F WGI +PDD ++++YVWIDAL NY+T  G  D 
Sbjct: 245 TPSARRNEMIGRLNEGLNDVPISRTNFKWGIPMPDDEKHVIYVWIDALMNYITAIGLGDG 304

Query: 248 PD----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            D      ++K+WPA +H++ K+I  FH++ WPA L++ +LPLP++V +H F + +G K+
Sbjct: 305 KDSIVYADRSKYWPASMHIMAKEISWFHSVIWPALLMALDLPLPQRVHAHAFWIREGRKM 364

Query: 304 SKSLGNVIDPI---EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIG 359
           SKSLGN +D        E  G+DA+RY+L  E   G +D  +  + +++  ++DL N +G
Sbjct: 365 SKSLGNFVDLACMDRFKEHYGLDAMRYYLAVEGPIGAQDANFSAERVQEIYSSDLVNTMG 424

Query: 360 NLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N VSR+ +MI K +DG + +  A     T  +    +  S  +Q+         + RA A
Sbjct: 425 NSVSRTTAMINKYFDGEVRSEEANGARVTFDNWDWPARTSAHVQDALTAYDKLDLPRAAA 484

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++V +VD +    +P+ + K     A  +  LY  +E +R  A+LL+  +P   NK+
Sbjct: 485 AAKNIVMDVDLFITETEPFRMAKDESKSAELAACLYQCLEALRIAAVLLEPLMP---NKM 541

Query: 474 FDILFVADENRCFQSLDQR-----LKPGFMLHKTFDPIFPR 509
            +  F A       S+ QR     LKPG  + K    +FPR
Sbjct: 542 AE--FDAGVGLGEGSIAQRTKWGGLKPGTKVEKL--ALFPR 578


>gi|33240420|ref|NP_875362.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|33237947|gb|AAQ00015.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 507

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 192/514 (37%), Positives = 281/514 (54%), Gaps = 20/514 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + I+T + Y N +PH+G  Y  I  D  AR+ +L+G +V+F TG DEHGQKI + A+   
Sbjct: 3   ITITTPLYYVNDKPHLGSTYTTIACDAFARYKKLNGNNVVFITGVDEHGQKIERTAKANN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++      + +  +  +     IS D FIRTT  +H       + ++   GDI  G   G
Sbjct: 63  ISPSDHCSKIASQYEMLWKKWSISNDKFIRTTSSQHKTLVEKFFHRVDQNGDIRLGRQQG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E Y +D     GA     +    P++W +EE  FF LS YQ K+ +   S P F
Sbjct: 123 WYCVGCEEYKDDP---PGAKDPICSTHKMPLEWRDEENLFFCLSKYQTKIENLI-SQPNF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTG 243
           + PI RRNE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  YL+   T G
Sbjct: 179 VQPISRRNEIINFVSKGLKDFSISRVNISWGIPVPGFKGHTFYVWFDALLGYLSGLQTKG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            ++  D      WPAD+HVIGKDILRFHA+YWPA L+SA L LP +VF HGF+  +G K+
Sbjct: 239 EVE-LDELNNYGWPADVHVIGKDILRFHAVYWPAMLMSAGLDLPHRVFGHGFLTREGNKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++++ G D +R++L+ +I  G+DG + +       N DLAN IGNL++
Sbjct: 298 GKSLGNVLDPELLLDKYGEDPVRWYLLSDIKFGQDGDFQEKRFIDLTNNDLANTIGNLLN 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +   +P      E++E  L + S+ + ++    +      A   ++ L S 
Sbjct: 358 RTSSMSRKWFSNCVPNIHKENENNELKL-LASKTISDVINYYEQLSFKEACKAILDLASS 416

Query: 424 VDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y +  +PW+L K N +R   S  LY  +E  R +A L+   +P L+ KI + L   D
Sbjct: 417 SNLYLNDNEPWKLIKQNSERELVSYHLYNVLESCRIVATLIAPVLPNLSRKILNQLGFFD 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFD-----PIFPRF 510
                QS + +L  G +L K  +     PI PR 
Sbjct: 477 S---LQSWEHQLVWG-VLEKGQELPEPSPIIPRL 506


>gi|260435477|ref|ZP_05789447.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413351|gb|EEX06647.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 514

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 174/454 (38%), Positives = 254/454 (55%), Gaps = 11/454 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  +  D LARF RL    V F TG DEHGQKI + A+   ++
Sbjct: 5   LTTPLYYVNDRPHLGSTYTTLACDALARFERLQLEKVTFVTGVDEHGQKIQRTAERQQLS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  +RD+ +   IS D F+RTT  RH +     ++++   GDI  G  +GWY
Sbjct: 65  PQDHCDKVSTRYRDLWNQWGISNDRFVRTTNPRHLELVEQFYERVKASGDIVVGKQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D      A+    +    P++W +EE  FFRLS YQ  +     S  +FI 
Sbjct: 125 CVDCEEYKDDP---AEAESPSCSIHRKPLEWRDEENLFFRLSRYQSAIEELV-SRDDFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245
           P  RR EV +FV  GL+D S+SR    WG+ +PD P +  YVW DAL  YLT     G  
Sbjct: 181 PASRRQEVRNFVAQGLRDFSISRVNVSWGLPVPDHPGHTFYVWFDALLGYLTALLDDGES 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D   +  WPA +HVIGKDILRFHA++WPA  +SA LP+P+KVF HGF+  +G+K+ K
Sbjct: 241 VSLDRLASCGWPASVHVIGKDILRFHAVFWPAMCMSAGLPVPQKVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL++R+
Sbjct: 301 SLGNVLDPELLLERCGSDAVRWYLLRDIQFGDDGDFQQQRFLDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  K +D ++P  GA + +D  +    +  +  + E M       A   ++ L    +
Sbjct: 361 SSMARKWFDDVVPPAGAASSADHPLALKAAETVSTVIEAMPQLAFKTAAESILQLAIAAN 420

Query: 426 RYFDAQKPWELKKTNPDRASTV---LYVTVEVIR 456
            + +   PW   K  P +  +V   L+  +E  R
Sbjct: 421 GHLNETAPWSRMK-EPGQEQSVAEDLFAVLETTR 453


>gi|83769155|dbj|BAE59292.1| unnamed protein product [Aspergillus oryzae]
          Length = 590

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 275/511 (53%), Gaps = 42/511 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQK--- 57
           + ++  Y++T I Y NA PH+GH Y MIIAD+L R+  L G  D    TGTDEHG K   
Sbjct: 51  EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKGYS 110

Query: 58  -------------IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                        I +AA  A + T+ F D N + F D+A   ++ Y+ FIRTTE  H  
Sbjct: 111 QSKNFHGIDCTVQIQQAALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKK 170

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP-VQ 158
           + +  W+ +  +G IY   + GWYS+ DE +Y   +V+   D      +  +A+    V+
Sbjct: 171 SVQYFWEMLDHRGYIYTSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVE 230

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDW 216
           W  E  Y FRLSA+Q++LL  Y++   FI P     E++  V SGL+DLS+SR  +   W
Sbjct: 231 WSSETNYHFRLSAFQERLLDLYKT--GFITPSNYTTEIVKSVSSGLQDLSISRPVERLTW 288

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           GI +P D    +YVW+DAL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWP
Sbjct: 289 GIPVPGDDTQTIYVWLDALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWP 348

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           AFL++ +LPLP+ V  HG      EK+SKS GNV++P   ++  GVD +R+FL  +    
Sbjct: 349 AFLMALDLPLPRNVLVHGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLA 408

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDE 388
            D  YD   + +     L +GIGNLV R++        S I+    G +P   A  E D 
Sbjct: 409 GDADYDNSYIIRDYKKLLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELP---AANEQDL 465

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
               +      ++ E M++     AL  ++ L+ + ++Y    +PW+    +  +A  VL
Sbjct: 466 QFEQLLRETPVKVGEQMESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVL 521

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   E +R   ILLQ F+P  + ++ D+L V
Sbjct: 522 FNVAESLRIAGILLQPFMPTKSKELLDVLRV 552


>gi|328855021|gb|EGG04150.1| hypothetical protein MELLADRAFT_89644 [Melampsora larici-populina
           98AG31]
          Length = 482

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 183/457 (40%), Positives = 263/457 (57%), Gaps = 20/457 (4%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           TGTDEHG KI +AA     T     D  S  FR++A   +I Y DFIRTTE RHH   + 
Sbjct: 3   TGTDEHGIKIERAAIKNHQTPAELCDSVSIRFRELAKAGNIGYGDFIRTTESRHHLAVQT 62

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFF 167
            W ++ + G IYKG YSGWYS+ DE YY  ++V     G+  + +   V +W+EEE Y F
Sbjct: 63  FWNRLMENGHIYKGSYSGWYSVSDETYYAPNQVQSRNPGEMVSFETGQVVEWIEEENYMF 122

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225
           +LS +Q +L+ +   +P  ++  ++ + +       L DLS+SR T    WGI++P+DP 
Sbjct: 123 KLSDFQSRLIEWLTQNPTALVSSQKADIINQLQSKELPDLSISRPTDRLKWGIRVPNDPN 182

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
            I+YVWIDALTNYLT TGY    D  K + WP ++HVIGKDI RFHAIYWPA L+ A L 
Sbjct: 183 QIIYVWIDALTNYLTVTGYPWASDQIKNEKWPPNVHVIGKDITRFHAIYWPAMLMGAGLE 242

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LPK + +H     K EKISKS GNV+DP+E ++E GVD LRY+L   +A     + D D 
Sbjct: 243 LPKSIIAHAHWTMKDEKISKSRGNVVDPVESLKEWGVDGLRYYL---MAAPGSLWNDTDW 299

Query: 346 LKKRVN----ADLANGIGNLVSR--------SVSMILKDYDGMIPTPGAFT-ESDESILS 392
              RV+     DLA  +GNL+SR           + LK   G+   P +F  E  +++  
Sbjct: 300 APDRVDEHYRKDLAGQLGNLLSRISNPKLWSRFPVGLKSGTGLFYPPQSFKLERSQALAD 359

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + S++  E+  +M +  I +AL  +  +++E +R      PW    T  + +   +Y+  
Sbjct: 360 LISKLPDEVDRSMSSFEIPKALKSIFQVLTESNRLISEIAPWH-SSTGSEESHESIYLCA 418

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           E IR  AILLQ F+P+ +N+I + L ++ +NR +  L
Sbjct: 419 ESIRFSAILLQPFMPEKSNEILNQLGISVKNRGWTDL 455


>gi|303273506|ref|XP_003056114.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462198|gb|EEH59490.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 600

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/548 (35%), Positives = 298/548 (54%), Gaps = 64/548 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK +++T I Y N QPHIGH Y   IAD  ARF R  G DV F TGTDEHG K+ ++AQ 
Sbjct: 61  EKCFVTTPIYYVNDQPHIGHVYTSTIADAYARFQRSRGRDVFFLTGTDEHGLKVEQSAQK 120

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+NS  FR + D + I++D FIRTTE  H    +    K+ +KGD+Y G +
Sbjct: 121 RGISPQELADENSATFRQVLDDMGITFDGFIRTTEPYHKSQVQHFVDKLREKGDVYLGKF 180

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-----EEGYFFRLSAYQDKLLSY 179
            GWY    E YY +    K  +  Y     +PV   +     EE Y+F+LSAYQ +L   
Sbjct: 181 EGWYDEGQEEYYTET---KAKELDY----KSPVSGKDMARSSEENYYFKLSAYQRQLEKL 233

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +E  P+F+ P  RRNE++S +  GL D+ +SR  F WGI +P+D  +I+YVWIDAL NY+
Sbjct: 234 HEECPDFLSPPARRNEILSRLSQGLNDVPISRTNFKWGIAMPNDDNHIIYVWIDALLNYI 293

Query: 240 TTTGYLDNPD--------------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           T  G  + P               G    +WPA LH++ K+I  FHA+ WPA L++  +P
Sbjct: 294 TALGLAEEPSQPAASAGVATRRLKGELKDYWPASLHIMAKEISWFHAVIWPALLMALEMP 353

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---IEEVGVDALRYF-LVREIACGKDGFY 341
           LP++V +HGF +  G+K+SKSLGN +D   +    +  G+D+ RYF LV      +D  +
Sbjct: 354 LPERVHAHGFWIRDGKKMSKSLGNFVDLKTITRYTDHYGLDSFRYFLLVDGPIAAQDANF 413

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE- 400
               +++  N DL N +GN +SR+ +M+ K Y+G+IPT       ++ I  +     +  
Sbjct: 414 ASSRVQEVYNTDLVNTLGNSLSRTTAMVNKYYNGIIPT-------EQQIQGIRITFGKRY 466

Query: 401 ----IRENMQNQLIHRALA--------QVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
               +     NQ++H   A          ++LV++VD + +  +P+ L K  T  +    
Sbjct: 467 DWPVVTAEAANQVMHAVEALEFPKAATAAVALVAKVDHFINELEPFRLAKDETKAEELGA 526

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-----PGFMLHK 501
           VLY  +EV+R   +LL+ F+P    ++ + L +        +LD+R+K     PG  + K
Sbjct: 527 VLYQCLEVLRIACVLLEPFLPNKMREVSENLDLG-----HGTLDERVKWGLLQPGSTVKK 581

Query: 502 TFDPIFPR 509
               +FPR
Sbjct: 582 M--TLFPR 587


>gi|328783339|ref|XP_001120625.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial [Apis
           mellifera]
          Length = 645

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 178/500 (35%), Positives = 287/500 (57%), Gaps = 23/500 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + +YI+T I Y NA PHIGH Y  ++AD +ARF+ + G  V  +TGTDEHG K+ KAA  
Sbjct: 122 KNIYITTPIFYVNAGPHIGHLYTAVLADTIARFNAMLGHSVFLSTGTDEHGTKVQKAANK 181

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A ++T  +  Q S  F++M D+  + Y  FIRTTE++H +     W  +   G IY+G Y
Sbjct: 182 AILSTFEYCTQISHQFQEMCDIFQVKYSKFIRTTEEQHQNAVLHFWNCLEKNGHIYRGKY 241

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWY++ +E + +D E+ +                 + ++WMEE+ Y FRL++++D+ L 
Sbjct: 242 SGWYNISEETFISDKEIIEKNFKNIKIKKGCIIESGDTIEWMEEDSYKFRLTSFKDQ-LK 300

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236
           Y+  +   I P   R  +I +++  L+DLS+SR      W I  P D  + +YVW+DAL 
Sbjct: 301 YWLKNENVIEPAIYRKILIPWLEE-LQDLSISRPISRVPWAIPTPSDKSHTIYVWLDALV 359

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT+ GY   P+ S  +FWP  + +IGKDIL+FH IYWPAFL++A L  PKK+  HG  
Sbjct: 360 NYLTSVGY---PNNSFKEFWPPTVQIIGKDILKFHGIYWPAFLMAAGLEPPKKLICHGHW 416

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             K +K+SKS GNVI P   + +   D LRYFL+R+     D  Y+K  ++K +N++LA+
Sbjct: 417 AVKDKKMSKSKGNVISPFIAMNDFTQDGLRYFLLRQAILDTDANYNKSKVRKILNSELAD 476

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV-----CSRVLQEIRENMQNQLIH 411
            +GNLV+R     + + DG+I     +     S L+V        + +E R+  +   ++
Sbjct: 477 TLGNLVNRCFGKTI-NPDGIIYNSIEYKSILNSELAVKNIKILENLSEEARKCYEKSDLY 535

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVP 467
             +  V+ ++   ++ F   +PW L K+    +  +   V+ + +E +R  A++L   +P
Sbjct: 536 HVVDHVMDMLRSANQVFAYYEPWNLSKSKDLNSEKQVEAVISLILENLRVAALVLYPIIP 595

Query: 468 KLANKIFDILFVADENRCFQ 487
           +L++ + D L V+ +NR ++
Sbjct: 596 QLSSNLLDFLQVSIKNRNWE 615


>gi|159465763|ref|XP_001691092.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279778|gb|EDP05538.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 526

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 187/480 (38%), Positives = 274/480 (57%), Gaps = 11/480 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y NA PH+G AY  I ADV +RF RL G  V F TGTDEHG+KIA AA+  G+T
Sbjct: 3   ITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKIAAAAEKRGMT 62

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D     + D+   LDI +D F+RTTE RH      +  +  ++GDIY   Y GWY
Sbjct: 63  PQAHCDDIVAQYTDLWGKLDIRFDRFVRTTESRHAALVVDVLGRCWERGDIYAADYEGWY 122

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + ++ E+   A  +       P Q  +E  YFFRLS Y  K +    S  +F+ 
Sbjct: 123 CVDCEEFKDEKEM---AQPRGCPTHRKPCQHRKEANYFFRLSKYS-KEIEELLSRDDFVQ 178

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RRNE++S+V+ GL+D S+SR   DWGI++P DP++ +YVW DAL  YL+     D  
Sbjct: 179 PASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLLPEDVA 238

Query: 249 DGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
             + A     WPA +HVIGKDILRFHAIYWP  LLSA LP+P+KV+ HGF+   G K+ K
Sbjct: 239 PATSAVPAHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPVPQKVYGHGFLTKDGLKMGK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           +LGN +DP  ++   G DA+R + ++EI  G+DG + +   +  VNA LAN +GN ++R+
Sbjct: 299 ALGNTLDPQALVSTYGSDAVRLYFMKEIIFGQDGDFSEGRFRDVVNAALANNLGNGLNRT 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++++ K +D  +P   A   +D  +  + +  L        +   H A   V++L S  +
Sbjct: 359 LNLLAKFHDSAVPLDSASLPADLPLRQLAAEKLPAAAAAYGSLSFHEAAEAVLALASRSN 418

Query: 426 RYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +Y +  +PW   K   D     A+ VL   +E +R +A+ L    P L+ +I+  L  +D
Sbjct: 419 QYLEETQPWTKLKKGTDEEKAEAAAVLVAVLEAVRCVAVGLAPLTPGLSRRIYAQLGYSD 478


>gi|66360370|ref|XP_627239.1| methionyl-tRNA synthetase of possible bacterial origin
           [Cryptosporidium parvum Iowa II]
 gi|46228842|gb|EAK89712.1| methionyl-tRNA synthetase of possible bacterial origin
           [Cryptosporidium parvum Iowa II]
          Length = 581

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 176/482 (36%), Positives = 274/482 (56%), Gaps = 18/482 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y +TAI Y N  PH+GHAYE++ +D+L R  RL G +  F TGTDEHGQKIA  A+  G+
Sbjct: 36  YFTTAINYTNGTPHMGHAYEIVTSDILVRIARLFGFNTRFQTGTDEHGQKIAATAEKKGI 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K   D+N + F++M + L IS D FIRTT+  H+++C+ LW++   KGDIY G Y+GW
Sbjct: 96  SPKELCDENVKQFKNMNEKLQISTDRFIRTTDADHYESCKELWRRCEAKGDIYLGKYNGW 155

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           Y++R+E++  + E    A    Y    +  P+  MEE  YFFR++ Y + + ++   +PE
Sbjct: 156 YNVREESFMTELE----AKMLNYTDPISGLPLTKMEEPSYFFRITNYLESIKNHIIDNPE 211

Query: 186 FILPIERRNEVISFVK---SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P   R  +++ ++   S  +DLS+SR +F WG+ +P+D +++MYVW DALTNY+T  
Sbjct: 212 FIQPESSRESILARLEALGSDSEDLSISRASFSWGVPVPNDQEHVMYVWFDALTNYITGL 271

Query: 243 GYLD-----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            + D       +    K+W   +H++GKDI  FH++ WPA LLS  L LPK +F+HGF+ 
Sbjct: 272 KWADFDNDLEENSLFNKYWENTVHIVGKDITWFHSVIWPAMLLSVGLSLPKTIFAHGFVT 331

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKSLGNV+DP E I+++G D  RY+L RE   G D  Y    +    N +LA+
Sbjct: 332 APDGKKMSKSLGNVVDPFEQIDKIGSDPFRYYLAREGRFGNDIKYQPSSVIDYNNGELAD 391

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             GNL+SR  ++  K   G+ P+       D+ +      V +E         I   +  
Sbjct: 392 TYGNLISRITNLTHKFCQGVAPSLSQSLLLDKPV--DIDTVFEEYYLAWNCFRIDECIQI 449

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + L   ++++     PW       D     ++ + +E    ++ILL  F+     ++F+
Sbjct: 450 AMDLSRNINKFLTDHAPWNKDNGKSDEERIEIIRIVLEGSYYISILLSPFITLACKEVFN 509

Query: 476 IL 477
            L
Sbjct: 510 RL 511


>gi|114582400|ref|XP_516010.2| PREDICTED: methionine-tRNA synthetase 2 [Pan troglodytes]
          Length = 593

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 273/511 (53%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RTYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G  +       +PV W +EE Y FRLS ++  L 
Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H  
Sbjct: 284 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +   + Y     T     PG    S      D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 551


>gi|297264625|ref|XP_001086799.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1
           [Macaca mulatta]
          Length = 593

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/504 (36%), Positives = 275/504 (54%), Gaps = 30/504 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAAQN 64
           Y +T I Y NA PHIGH Y  ++AD L+R  RL G       F+TGTDEHG KI +AA  
Sbjct: 46  YFTTPIFYVNAAPHIGHLYSALLADALSRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+      D+ S++F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG Y
Sbjct: 106 AGLAPTELCDRVSKHFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKGVY 165

Query: 125 SGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179
            GWY   DE +  + +V +  G  G  +       +PV W +EE Y FRLS +++ L  +
Sbjct: 166 EGWYCASDECFLPEAKVTRQLGPLGDSFPVSLESGHPVSWTKEENYIFRLSQFREPLQRW 225

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
              +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL N
Sbjct: 226 LRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDALVN 285

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H    
Sbjct: 286 YLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWT 342

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ 
Sbjct: 343 VCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADA 402

Query: 358 IGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRE 403
           +G L++R  +  +   + Y     T     PG    S      D +++S  + + +++ +
Sbjct: 403 LGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSSVATLPKQVAD 462

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460
           +  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    
Sbjct: 463 HYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGT 522

Query: 461 LLQAFVPKLANKIFDILFVADENR 484
           LLQ   P LA+K+   L V+   R
Sbjct: 523 LLQPVTPSLADKLLSRLGVSASER 546


>gi|307186752|gb|EFN72197.1| Methionyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 540

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/498 (37%), Positives = 277/498 (55%), Gaps = 24/498 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NA PHIGH Y  ++AD +AR++ + G    FTTGTDEHG KI  AA  AG+
Sbjct: 16  YITTPIFYVNAGPHIGHLYSAVLADAVARYNTMLGHKTFFTTGTDEHGNKIKVAAVAAGL 75

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +    S+ F++M D  ++ Y  FIRTTEK+H+D     WK++ ++G IY G YSGW
Sbjct: 76  PNLEYCTNISQQFKEMCDRFEVDYSRFIRTTEKQHYDAVHHFWKRLEERGHIYLGKYSGW 135

Query: 128 YSLRDEAYYNDDEVYKGADGQ----YYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y + DEA+ +D E+ +  D        +AQ  N V+W EEE Y FRLSA+QD L  + + 
Sbjct: 136 YCVSDEAFLSDTELVEQRDPTGKIIKVSAQSGNTVEWTEEENYKFRLSAFQDDLKHWLKD 195

Query: 183 HPEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNY 238
               I P      +  +++ G  L+DLS++  R    W +  P D  + +YVW+DAL NY
Sbjct: 196 E-NTIKPALYHKMLSEWIEEGSCLQDLSITRIRSKVPWAMPSPCDESHSIYVWMDALINY 254

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY   PD S  +FWP  + VIGKDIL+FH +YWPAFL++A L  PK +  H     
Sbjct: 255 LTALGY---PDESFKEFWPPTIQVIGKDILKFHGVYWPAFLIAAGLEPPKTLLCHAHWTV 311

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNVI P E   +   D LRYF++RE     D  Y    +   +N++LA+ +
Sbjct: 312 DHQKMSKSKGNVISPFEAANDYSEDGLRYFILREAVPQNDANYSSKKIVNVLNSELADTL 371

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-----VLQEIRENMQNQLIHRA 413
           GNLV+R     +       P P  +    +S ++  +R     V ++ RE+ +   +H  
Sbjct: 372 GNLVNRCAGKTINP-SKEFPDPAKYWNVLQSQVADETRKALESVGRKARESYEEYNLHHV 430

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPK 468
           +  V++++   +R  D  +PW+L+K   D  S      V+ + +E  R  A++L    P+
Sbjct: 431 VDAVMNMLHCANRMIDYHEPWQLRKQIDDANSIRELKAVISLALESSRIAALILYPITPR 490

Query: 469 LANKIFDILFVADENRCF 486
           L++ + D L +  ENR +
Sbjct: 491 LSSNLLDFLNIPRENRTW 508


>gi|83320001|ref|YP_424033.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283887|gb|ABC01819.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 509

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 176/478 (36%), Positives = 283/478 (59%), Gaps = 14/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I YD FIRTT+  H +T + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHQNTVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  +++V +    +  N +    Q + E+ YF ++S +Q+ + +  +S  
Sbjct: 123 EGIYCVSCEEFLTNEQVDENGLCKISNTKP---QLVNEDTYFLKVSQFQEFVQNILKS-- 177

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++ +FV+ GLKDLS++R +F WGI I  D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITQDEKHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQKDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I         D+ ++ +  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--NYDQELIDLGIKTIDNYIFNMDQYKISEAIKAVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  ++Y + + PW L+K N       +  T++  R +AI+     P L +   D++
Sbjct: 416 LSNACNKYIEVKTPWNLEKENKIEELKTVLSTLQ--RNIAIISYLLKPVLVDSYNDMI 471


>gi|330723242|gb|AEC45612.1| methionyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 510

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 271/479 (56%), Gaps = 7/479 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y +   HIGH Y   +A V+ R+ +L G D    TG+DEHG KI + A+
Sbjct: 2   KKTFYVTTPIYYASGDLHIGHLYTTTLAWVIKRYKQLVGFDTKMLTGSDEHGLKIQQKAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  ++FVDQ  + F ++   LDI YD F RTT  +H      +++K+ +KG IYKG 
Sbjct: 62  QNKLDIQIFVDQVVKKFENLWQKLDIDYDFFSRTTSDKHKKIVAQIFEKMLEKGLIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+ DE +    +        Y+    N +++ E+E YFF +  +   LLSY++ +
Sbjct: 122 YSGWYSISDEEFLTPTQAVLKNGKYYHPVSDNLLEYFEQETYFFNMKKFAPWLLSYWKEN 181

Query: 184 PEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P F++  + +NE+  +F++ GL+DLS++R   +WGIK+  D ++ +YVW+DAL NYLT  
Sbjct: 182 PNFVINKKIQNELEKNFLEKGLEDLSVTRTDLEWGIKVISDQKHTIYVWLDALFNYLTAL 241

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            +    D    K+W      LH++GK+I RFH IYWP FL S ++ LP  + SHG+I+  
Sbjct: 242 NFDLENDQDYQKYWKNGDQILHIVGKEITRFHCIYWPIFLKSLDIKLPTSILSHGWIITN 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DPI+++E+   + ++ F   +I  G DG +D++ L    N+ LAN  G
Sbjct: 302 EGKMSKSKGNVVDPIKLLEQYDKEVIKLFFASQIPVGSDGIFDQENLTLFYNSTLANNFG 361

Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+++MI K++D  +        E D+ I            ++  N  + +A  +V 
Sbjct: 362 NLITRTITMIFKNFDRPVRYKKEELLEEDKQIFEAIIETKNNYIKHFDNYELDKAFKEVF 421

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SL  +++ Y D  KPW   +TN DR   +L   +  I  +  LL   +   + K+  IL
Sbjct: 422 SLSKKLNGYIDITKPWS--ETNKDRLEVILNTLINGIYAVNTLLSVCLKNTSQKVLKIL 478


>gi|304373127|ref|YP_003856336.1| methionyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309318|gb|ADM21798.1| methionyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 510

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 271/479 (56%), Gaps = 7/479 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y +   HIGH Y   +A V+ R+ +L G D    TG+DEHG KI + A+
Sbjct: 2   KKTFYVTTPIYYASGDLHIGHLYTTTLAWVIKRYKQLVGFDTKMLTGSDEHGLKIQQKAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  ++FVDQ  + F ++   LDI YD F RTT  +H      +++K+ +KG IYKG 
Sbjct: 62  QNKLDIQIFVDQVVKKFENLWQKLDIDYDFFSRTTSDKHKKIVAQIFEKMLEKGLIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+ DE +    +        Y+    N +++ E+E YFF +  +   LLSY++ +
Sbjct: 122 YSGWYSISDEEFLTPTQAVLKNGKYYHPVSDNLLEYFEQETYFFNMKKFAPWLLSYWKEN 181

Query: 184 PEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P F++  + +NE+  +F++ GL+DLS++R   +WGIK+  D ++ +YVW+DAL NYLT  
Sbjct: 182 PIFVINKKIQNELEKNFLEKGLEDLSVTRTDLEWGIKVISDQKHTIYVWLDALFNYLTAL 241

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            +    D    K+W      LH++GK+I RFH IYWP FL S ++ LP  + SHG+I+  
Sbjct: 242 NFDLENDQDYQKYWKNGDQILHIVGKEITRFHCIYWPIFLKSLDIKLPTSILSHGWIITN 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DPI+++E+   + ++ F   +I  G DG +D++ L    N+ LAN  G
Sbjct: 302 EGKMSKSKGNVVDPIKLLEQYDKEVIKLFFASQIPVGSDGIFDQENLTLFYNSTLANNFG 361

Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+++MI K++D  +        E D+ I            ++  N  + +A  ++ 
Sbjct: 362 NLITRTITMIFKNFDRAVRYKKEELLEEDKQIFEAIIETKNNYVKHFDNYELDKAFKEIF 421

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SL  +++ Y D  KPW   +TN DR   +L   +  I  +  LL   +   + K+  IL
Sbjct: 422 SLSKKLNGYIDITKPWS--ETNKDRLEVILNTLINGIYAVNTLLSVCLKNTSQKVLKIL 478


>gi|323451800|gb|EGB07676.1| hypothetical protein AURANDRAFT_71793 [Aureococcus anophagefferens]
          Length = 1349

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 171/406 (42%), Positives = 247/406 (60%), Gaps = 10/406 (2%)

Query: 109  LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW-MEEEGYFF 167
            LWK +   G IY G Y GWY +RDE YY + E+    DG+        V+W  +E  YFF
Sbjct: 939  LWKALEANGMIYLGSYEGWYCVRDECYYTESELV---DGKAPTGAD--VEWKAKEPSYFF 993

Query: 168  RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQY 226
            +LSA+++KL+  YE   + + P  RRNEV+SF+K   L+DLS+SR TF WG+ +P D  +
Sbjct: 994  KLSAFREKLIDLYEGDEDALGPKSRRNEVLSFLKGEELRDLSISRTTFKWGLSVPGDDDH 1053

Query: 227  IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
            ++YVW+DAL NYLT  GY D+ D  +   W    HV+GKDILRFHA+YWPA LL+A+LP 
Sbjct: 1054 VIYVWVDALANYLTALGYGDDDDEWR-DMWAGATHVVGKDILRFHAVYWPALLLAADLPP 1112

Query: 287  PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            PKK+F+HG+    G KISKSLGNV+ P E++ + GVDA RYFL+ E+  G DG + +  +
Sbjct: 1113 PKKIFAHGWWTKDGAKISKSLGNVVVPAELLADYGVDATRYFLLSEVPFGGDGDFSRTAM 1172

Query: 347  KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENM 405
                N  LAN +GNL  R  +MI K+  G  P  P   T+ D ++L+    +   +R + 
Sbjct: 1173 LAAANGFLANAVGNLCQRCCAMIAKNCGGAAPALPDEPTDDDAALLAAARGLGDAMRPHA 1232

Query: 406  QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                +  AL++V ++V   +RYFD  +PW+L+K++P+R   VL V++E +R +AI  Q F
Sbjct: 1233 DALRLDGALSEVEAVVRAANRYFDRAEPWKLRKSDPERMGDVLAVSLETLRCIAIAYQPF 1292

Query: 466  VPKLANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +P  A ++  +L VA+  +R   +L     P         P+FPR 
Sbjct: 1293 MPDAAGRMLALLGVAEGPDRALAALPAGGVPAGAALPKPKPVFPRI 1338


>gi|14318634|gb|AAH09115.1| MARS2 protein [Homo sapiens]
          Length = 594

 Score =  330 bits (845), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 272/511 (53%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 45  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 105 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 164

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G  +       +PV W +EE Y FRLS ++  L 
Sbjct: 165 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 224

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 225 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 284

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H  
Sbjct: 285 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 341

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 342 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 401

Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +   + Y     T     PG    S      D +++S  + + +++
Sbjct: 402 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 461

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 462 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 521

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 522 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 552


>gi|24308436|ref|NP_612404.1| methionyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|85541638|sp|Q96GW9|SYMM_HUMAN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|21758066|dbj|BAC05238.1| unnamed protein product [Homo sapiens]
 gi|62702320|gb|AAX93244.1| unknown [Homo sapiens]
 gi|116497019|gb|AAI26295.1| Methionyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119590576|gb|EAW70170.1| methionine-tRNA synthetase 2 (mitochondrial) [Homo sapiens]
 gi|313883188|gb|ADR83080.1| methionyl-tRNA synthetase 2, mitochondrial [synthetic construct]
          Length = 593

 Score =  329 bits (844), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 272/511 (53%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G  +       +PV W +EE Y FRLS ++  L 
Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H  
Sbjct: 284 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +   + Y     T     PG    S      D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSASERSLGEL 551


>gi|256384330|gb|ACU78900.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256385163|gb|ACU79732.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455562|gb|ADH21797.1| methionine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 509

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 173/478 (36%), Positives = 284/478 (59%), Gaps = 14/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I+YD FIRTT+  H    + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNINYDKFIRTTDDYHEKAVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++ +    +  N +    Q + E+ YF ++S +Q+ + +  +S  
Sbjct: 123 EGIYCVSCEEFLTNEQIDENGLCKISNTKP---QLVNEDTYFLKVSQFQEFVQNVLKS-- 177

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++ +FV+ GLKDLS++R +F WGI I +D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITEDQRHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I         D+ ++++  + +     NM    I  ++  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYINLSNV--NYDQELINLGIKTIDNYVFNMDQYKISESIKAVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  ++Y + + PW L+K N       +  T++  R +AI+     P L +   D++
Sbjct: 416 LSNACNKYIETKAPWNLEKENKIEELKTVLATLQ--RNIAIISYLLKPVLVDSYKDMI 471


>gi|78212864|ref|YP_381643.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78197323|gb|ABB35088.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 514

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 173/453 (38%), Positives = 250/453 (55%), Gaps = 9/453 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  +  D LARF RL G  V F TG DEHGQKI + A+   ++
Sbjct: 5   LTTPLYYVNDRPHLGSTYTTLACDALARFERLLGEKVTFVTGVDEHGQKIQRTAERQQLS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  +RD+ +   IS D F+RTT  RH +     ++++   GDI  G  +GWY
Sbjct: 65  PQDHCDRVSSRYRDLWNQWGISDDRFVRTTNPRHLELVGEFYERVKASGDIVVGKQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D      A+         P++W +EE  FFRLS YQ  +     +  +FI 
Sbjct: 125 CVDCEEYKDDP---AEAESPSCPIHRKPLEWRDEENLFFRLSRYQSAIEELV-ARDDFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT---GYL 245
           P+ RR EV +FV  GL D S+SR    WG+ + D P +  YVW DAL  YLT     G  
Sbjct: 181 PVSRRQEVRNFVAQGLHDFSISRVNVSWGLPVHDHPGHTFYVWFDALLGYLTALLDDGEA 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + D   +  WPA +HVIGKDILRFHA++WPA  +SA LP+P+KVF HGF+  +G+K+ K
Sbjct: 241 VSLDRLASCGWPASVHVIGKDILRFHAVFWPAMCMSAGLPVPQKVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL++R+
Sbjct: 301 SLGNVLDPELLLERCGTDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  K +D  +P  GA +E+D  +    +  +  + E M       A   ++ L    +
Sbjct: 361 SSMARKWFDDGVPPAGAASEADHPLALKAAETISTVMEAMPQLAFKTAAESILQLAIAAN 420

Query: 426 RYFDAQKPWELKKTNPDRASTV--LYVTVEVIR 456
            + +   PW   K     A     L+  +E  R
Sbjct: 421 GHLNDTAPWSRMKEPGQEAGVAEDLFAVLETTR 453


>gi|37196758|dbj|BAC92749.1| mitochondrial methionyl-tRNA synthetase [Homo sapiens]
          Length = 593

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 272/511 (53%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G  +       +PV W +EE Y FRLS ++  L 
Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H  
Sbjct: 284 VNYLTVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +   + Y     T     PG    S      D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 521 GTLLQPVTPSLADKMMSRLGVSASERSLGEL 551


>gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica]
 gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica]
          Length = 532

 Score =  329 bits (843), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 277/495 (55%), Gaps = 27/495 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YPNA+PH+GH Y M++ADV+ R++ L+G D    TG DEHG KI  AA+   +
Sbjct: 23  YVTTPIFYPNAEPHVGHLYSMVLADVIKRYNGLNGKDTYLLTGIDEHGLKIQTAAEKLNL 82

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K+  DQ +  F+ +A+V +I  + F+RTT+  H +T   +W +++  G IYKG +SG+
Sbjct: 83  QPKILCDQLAEKFKQLAEVGNIDNNRFMRTTDADHVNTVNDMWDRLTKAGYIYKGSHSGY 142

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           Y + DE YY  D+ ++  +G+  + +    V+W EEE YFFRLSA +DKLL +Y ++PEF
Sbjct: 143 YCVSDETYYPRDKCHE-VNGRLVSIETGKEVEWTEEENYFFRLSAMRDKLLEFYNANPEF 201

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           ++P E    ++  V   L DLS+SR T    WGI +P D   ++YVW+DAL NY T  G+
Sbjct: 202 VMPKEVYRGIVDEVSRDLPDLSISRPTNRLSWGIPVPGDDSQVIYVWLDALVNYATAQGF 261

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               +          +H++GKDI RFHAIYWPAFLL+A +  PK V  H   + +G+K+S
Sbjct: 262 DTVSEA---------VHIVGKDIQRFHAIYWPAFLLAAGIKPPKSVLVHSHWISEGQKMS 312

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP+ VI + G D++R+ L+ +    KD  + +  + ++ N  L N +GNL+ R
Sbjct: 313 KSIGNVVDPMHVISKYGSDSVRFLLMCDGHLHKDNDFTETKIAEKHNTMLVNKLGNLLMR 372

Query: 365 SVSMIL-----------KDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
             S              K  + M    G  FT +   ++     +    + +M      +
Sbjct: 373 ITSAKFNLVDSLEQPRQKTVEDMAEFFGPEFTTTRNELIRALKELPDVYKADMARGSTPK 432

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  +  +++  +++ +  KPW  K+   +  + +L    E  R   IL+Q F P+ A K
Sbjct: 433 TITDLYYVINLANKHVEETKPWSFKEK--EIPAMILREAAETARIALILMQPFTPEFATK 490

Query: 473 IFDILFVADENRCFQ 487
             D L V  E R  +
Sbjct: 491 GLDRLGVKKERRTME 505


>gi|302801510|ref|XP_002982511.1| hypothetical protein SELMODRAFT_155208 [Selaginella moellendorffii]
 gi|300149610|gb|EFJ16264.1| hypothetical protein SELMODRAFT_155208 [Selaginella moellendorffii]
          Length = 509

 Score =  328 bits (842), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 185/498 (37%), Positives = 267/498 (53%), Gaps = 14/498 (2%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +G AY  I AD  ARF RL G +V+F TGTDEHG+KIA AA   G   K   D  +  + 
Sbjct: 1   MGSAYPTIAADAFARFQRLQGRNVVFVTGTDEHGEKIATAAAAKGRKPKEHCDLIANEYA 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +   L+ISYD FIRTT++ H       +K++ DKGDIY   Y G Y +  E Y +  ++
Sbjct: 61  SLWKDLNISYDKFIRTTDEAHERAVEQFYKRVYDKGDIYCANYEGLYCVNCEEYKDAKDL 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               + Q       P    +E+ YFF LS YQ +L     + P+F+ P  R NEV+ +VK
Sbjct: 121 I---EEQCCPIHRKPCVERKEKNYFFALSKYQSRLEELLSTRPDFVRPPFRMNEVLGWVK 177

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD 259
            GL D S+SR+  +WGI +P D +  +YVW DAL  Y++    G    P+ + A  WPA 
Sbjct: 178 EGLHDFSISREAVEWGIPVPTDKKQTIYVWFDALLGYISALLDGKEVTPENAAASGWPAS 237

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H+IGKDILRFHA+YWPA L SA   +P+ VF HGF+   G K+ KSLGN I+P E++  
Sbjct: 238 VHIIGKDILRFHAVYWPAMLWSAGFAIPETVFGHGFLTKDGLKMGKSLGNTIEPQELVSR 297

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            GVD++RYF + E+  G+DG Y ++     VNA LAN IGNL++R++ ++ K+    IP 
Sbjct: 298 FGVDSVRYFFLNEMEFGRDGDYSEERFITIVNAHLANTIGNLLNRTLGLLKKNCASTIPV 357

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE--LK 437
                  +  +       +   +          A   ++SL +  + Y + + PW    +
Sbjct: 358 DSESIPEENPVRVFAEAAVALAKRRYSELHFSSACEALLSLANTGNAYLEERAPWTGFKQ 417

Query: 438 KTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--- 492
           K  P   +    L V +E +R L++ L   VP L  +++  L   DE+    S D     
Sbjct: 418 KGTPAAEAAAKDLAVILESVRILSVALSPVVPDLCRRMWLQLGYQDEHFNQISWDDTRWG 477

Query: 493 -LKPGFMLHKTFDPIFPR 509
            LK G  L  T  P+FP+
Sbjct: 478 GLKAG-QLVATPSPVFPK 494


>gi|313664963|ref|YP_004046834.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949209|gb|ADR23805.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 509

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 176/478 (36%), Positives = 285/478 (59%), Gaps = 14/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I+YD FIRTT+  H +  + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQTFKDLWAKLNINYDKFIRTTDDYHEEAVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++    +G    +   P Q + E+ YF ++S +Q+ + +  +S  
Sbjct: 123 EGIYCVSCEEFLTNEQI--DENGLCKISSTKP-QLVNEDTYFLKVSQFQEFVQNILKS-- 177

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++ +FV+ GLKDLS++R +F WGI I  D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITQDEKHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVILEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYISNDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I       + D+ ++ +  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--KYDQELIDLGIKTIDNYIFNMDQYKISEAIKVVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  ++Y + + PW L+K N  R   +  V + + R +AI+     P L +   D++
Sbjct: 416 LSNACNKYIEVKTPWNLEKEN--RIEELKTVLITLQRNIAIISYLLKPILVDSYKDMI 471


>gi|237744196|ref|ZP_04574677.1| methionyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431425|gb|EEO41637.1| methionyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 563

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 181/440 (41%), Positives = 268/440 (60%), Gaps = 15/440 (3%)

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           NF++M   L+I YDDFIRTTE RH    + +   ++ KGDIYKG Y G Y +  E ++ +
Sbjct: 4   NFKNMWAALNIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEYEGKYCISCETFFPE 63

Query: 139 DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           +++    DG          ++ ++EE YFF++S Y D LL + E HP+FILP  RRNEVI
Sbjct: 64  NQL----DGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFILPHSRRNEVI 119

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           SF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G+ +N +    KFW 
Sbjct: 120 SFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGF-ENDEKKFDKFWN 178

Query: 258 AD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
               +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+SKS GNV++P +
Sbjct: 179 NARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSKSRGNVVNPYD 238

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL++R++ M  K ++G
Sbjct: 239 EIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNLLNRTLGMYKKYFNG 298

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           ++         D  I S+ + V++++ + M      RAL  +   +S +++Y D   PW 
Sbjct: 299 VVVASSTTEPIDNEIKSMFNDVIKDVEKYMYLFEFSRALETIWKFISRLNKYIDETMPWS 358

Query: 436 LKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
           L K  T   R +TV+ +  E + ++A L+  ++P+ A KI + L +  +  N  F  + +
Sbjct: 359 LAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGIDKDITNIKFDDIKE 418

Query: 492 R--LKPGFMLHKTFDPIFPR 509
               K G  L +   PIFPR
Sbjct: 419 WHIFKAGHKLGEA-SPIFPR 437


>gi|111220457|ref|YP_711251.1| methionyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111147989|emb|CAJ59655.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (partial)
           [Frankia alni ACN14a]
          Length = 503

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 271/482 (56%), Gaps = 20/482 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++TAI Y N +PH+GHA E++  D  AR  R  G +V   TGTD++  K  + A+  
Sbjct: 3   RYFVTTAIPYVNGKPHVGHALELVETDAFARHLRARGDEVRCQTGTDDNALKNVQGAEAE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T   +V++ +  F  + + L +S+DDFI+T T+ RH      LW   +++GD Y+  Y
Sbjct: 63  GITPAEYVERVAARFISLREPLSLSFDDFIKTSTDPRHRPGVEKLWAACAERGDFYRKSY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183
           +G Y +  E +Y+ DE+  G        +H  V   +EE  +FFRLS YQD+L     + 
Sbjct: 123 AGLYCVGCELFYSPDELVDG-----RCPEHGTVPDLVEESNWFFRLSRYQDQLHELISTD 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              I P  R+ EV+SF+++GL+D S SR   +   WGI +P DP  ++YVW DAL NY+T
Sbjct: 178 RLRIEPATRKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPDQVIYVWFDALGNYIT 237

Query: 241 TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
             GY  + D +   +W    A +HVIGK I+RFHA+YWPA LLSA + LP  +F H ++ 
Sbjct: 238 APGYGTD-DATFQHWWNDSDARVHVIGKGIIRFHAVYWPAMLLSAGVRLPDTIFVHEYLT 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+KISKS GN  DP +++     DALR++++R++A   D  Y  + L  R N DLAN 
Sbjct: 297 ADGQKISKSAGNAEDPADIVAASNTDALRWWMLRDVARSGDTDYTTERLLARANEDLANN 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNLV+R+VSM+ +  DG+IP   A      ++ +V  +    I          RA   V
Sbjct: 357 IGNLVNRTVSMVKRYRDGVIPPVAADNPGAAALRAVREQAPATIDAAFTAFDFRRAAEAV 416

Query: 418 ISLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            ++ +E +RY +A +PW+L K        P     VL   V   R+LA  L  F+P  A 
Sbjct: 417 TAIGNEGNRYVEAARPWDLAKAERKEDAGPAALDAVLAELVATCRELAAHLTPFLPDAAP 476

Query: 472 KI 473
           +I
Sbjct: 477 RI 478


>gi|47226183|emb|CAG08330.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 492

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 181/475 (38%), Positives = 263/475 (55%), Gaps = 23/475 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E    YI+T I Y NA PH+GH Y ++IAD   R  +L G +  FTTGTDEHG KI +AA
Sbjct: 10  ENRNYYITTPIFYVNASPHLGHLYSVVIADCFHRQKQLQGFNSRFTTGTDEHGLKIQQAA 69

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG     F    S  FR++    +IS  D+IRTTE RHH   R  W  +  KG IYKG
Sbjct: 70  EAAGRDPLTFCTSVSERFRNLFSSCNISNTDYIRTTEPRHHRAVRHFWSVLYGKGLIYKG 129

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWYS +DE++    +V    D +    +      + V+WM+EE Y FRLS ++ +LL
Sbjct: 130 RYEGWYSTQDESFLMPSQVTTAQDSEGKEIKISLESGHKVEWMKEENYMFRLSRFRLQLL 189

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P  I P    + V+  ++  L DLS+SR+     WGI +PDDP+  +YVW+DAL
Sbjct: 190 DWLRENPRAIQPERFYHSVLQLLQEELPDLSVSRQKSRLQWGIPVPDDPEQTIYVWLDAL 249

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT   Y  N +    ++W    HVIGKDIL+FHAIYWPAFLL A LPLP+ +  H  
Sbjct: 250 VNYLTVVDYPHNHE----RWWNVAHHVIGKDILKFHAIYWPAFLLGAGLPLPQTIHVHSH 305

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP E  +    D LRYFL+R+     D  Y  D ++K +N++LA
Sbjct: 306 WTVAGKKMSKSLGNVVDPRERSQAFTNDGLRYFLLRQGVPDADCDYRDDKVRKLLNSELA 365

Query: 356 NGIGNLVSRSVSMILKDYDGMIP-TPGAF--------TESDESILSVCSRVLQEIRENMQ 406
           + +G L++R  +  L       P  P AF         + D  +L     +   + ++ +
Sbjct: 366 DALGGLLNRCTAPALNPAQVYAPFCPDAFPGQRGGRAVDEDYRMLDSVKHLPAVVEQHFE 425

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
           N  +++AL  + + V + + +     PW+L + +       STV++V+  ++  L
Sbjct: 426 NMHVYKALEAIGACVRQTNGFVQRHAPWKLDRGDAGDQRWLSTVIHVSPRMLEDL 480


>gi|307106870|gb|EFN55115.1| hypothetical protein CHLNCDRAFT_31569 [Chlorella variabilis]
          Length = 598

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 196/515 (38%), Positives = 284/515 (55%), Gaps = 18/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   ++T + Y NA PH+G AY  I AD LARF RL G  V F TGTDEHG+KIA AA  
Sbjct: 61  QPFTVTTPLYYVNAAPHMGSAYPTIAADALARFQRLQGRRVTFITGTDEHGEKIALAAAA 120

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K   D    +++ +   LDI YD FIRTT+ RH      + +++  +GDIYK  Y
Sbjct: 121 RGMAPKEHCDDVVASYKQLWRDLDIGYDSFIRTTDARHEALVVSVLERVWQRGDIYKADY 180

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y   DE    AD +       P    +EE YFF LS YQ +L     S  
Sbjct: 181 EGHYCVDCEEY--KDEADMDAD-KNCPVHRKPCVERKEENYFFALSKYQAQLEELCSSPG 237

Query: 185 E-FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
             F+ P  RRNEV+ +VKSG++D S+SR   +WGI IP DP+  +YVW DAL  YL+  G
Sbjct: 238 TCFVQPESRRNEVLGWVKSGVRDFSISRAAVEWGIPIPRDPKQTVYVWFDALNGYLS--G 295

Query: 244 YLD-------NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            L        +P+   A  WPA LH+IGKDILRFHA+YWPA LLSA LP P +V+ HGF+
Sbjct: 296 LLPEGAAADASPEALAAAGWPASLHIIGKDILRFHAVYWPAMLLSAGLPPPDRVYGHGFL 355

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+ KSLGNV++P  ++   G DA+RY+ +REI  G+DG + ++  +  VNA LAN
Sbjct: 356 TKDGLKMGKSLGNVLEPRALVGAYGADAVRYYFLREIVFGQDGDFSEERFRNIVNASLAN 415

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL++R+++++ K+  G +P   A   +D  + ++ +     + +        +A   
Sbjct: 416 DVGNLLNRTLNLLRKNCGGEVPLDAADVAADHPLRALAAEKAPAVADAFARLRFDQACEA 475

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +S+    ++Y +   PW   K   +     A+ VL   +E +R +A+LL    P L+ +
Sbjct: 476 ALSISGRGNQYLEETAPWTAFKKGSEEQRAEAAAVLAAVLEAVRVVAVLLSPVTPSLSAR 535

Query: 473 IFDIL-FVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           I+  L F  ++++     D         H T  P+
Sbjct: 536 IYQQLGFTPEQHQALTWADTEWGALKQGHATPQPV 570


>gi|162287115|ref|NP_001079838.1| methionyl-tRNA synthetase, mitochondrial precursor [Xenopus laevis]
 gi|82240391|sp|Q7T0Z0|SYMM_XENLA RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|33417075|gb|AAH55977.1| MGC68850 protein [Xenopus laevis]
          Length = 562

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 180/505 (35%), Positives = 278/505 (55%), Gaps = 28/505 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  R  LY +T I Y NA PH+GH Y  ++ADV  R+  + G++   +TGTDEHG K+ +
Sbjct: 31  VASRPHLY-TTPIFYVNAAPHLGHVYSALLADVQHRYSAMCGIESKLSTGTDEHGMKVQQ 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+  + F    S  FR + D LDISY DF+RTTE RH +     W  + ++G IY
Sbjct: 90  AASALGLDPQTFCSTVSLQFRTIFDALDISYTDFVRTTEPRHIEAVSRFWMTLEEQGYIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG Y GWY   DEA+ ++ +      ++G   +      + V W+ EE Y FRLS+ +  
Sbjct: 150 KGTYEGWYCTSDEAFLSEGQTAEHTDFEGNKIRVSLESGHQVHWVSEENYMFRLSSLRPA 209

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL++ ++ P  + P      V  +++  L DLS+SR+     WGI +P D  +++YVW+D
Sbjct: 210 LLNWLQTEP--VHPAPFLKLVHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLD 267

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY  NP  +    W    H++GKDILRFHAIYWPAFL++A LP P+K+  H
Sbjct: 268 ALVNYLTAAGY-PNPQLAP---WGPSTHLLGKDILRFHAIYWPAFLIAAGLPPPQKLLVH 323

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSL NV+DP + I     D LRY+L+R  A  +D  +     +  +N++
Sbjct: 324 SHWTSEGTKMSKSLKNVVDPSDCIRRYTTDGLRYYLLRHGAPERDCDFTHRTARMLLNSE 383

Query: 354 LANGIGNLVSRSVSMILK--------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           LA+ +G L++R  +  +          Y+     P A  +    +L     +  E+ + +
Sbjct: 384 LADALGGLLNRCTAPAINPMQHFPKFQYENF---PVASRDQVHDLLGALQELPVEVDQWI 440

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILL 462
           +   +H+AL  + + V   + +F +Q PW+L++     A+   +V+Y+T+E +R  A LL
Sbjct: 441 KKFQVHKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYLTLEALRLYATLL 500

Query: 463 QAFVPKLANKIFDILFVADENRCFQ 487
              VP LA  + D L V  + R  +
Sbjct: 501 HPAVPGLATVVLDRLGVPHKMRTLK 525


>gi|331703032|ref|YP_004399719.1| methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801587|emb|CBW53740.1| Methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 509

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 173/478 (36%), Positives = 283/478 (59%), Gaps = 14/478 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I YD FIRTT+  H    + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHEKAVQRIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++ +    +  N +    Q + E+ YF ++S +Q+ + +  +S  
Sbjct: 123 EGIYCVSCEEFLTNEQIDENGLCKISNTKP---QLVNEDTYFLKVSQFQEFVQNVLKS-- 177

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++ +FV+ GLKDLS++R +F WGI I +D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITEDQRHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDECEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    D LR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADPLRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I       + D+ ++++  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--KYDQELINLGIKTIDNYVFNMDQYKISEAIKVVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +  ++Y + + PW L+K N       +  T++  R +AI+     P L +   D++
Sbjct: 416 LSNACNKYIETKAPWNLEKENKIEELKTVLATLQ--RNIAIISYLLKPILVDSYKDMI 471


>gi|157103464|ref|XP_001647993.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108880524|gb|EAT44749.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 553

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 179/500 (35%), Positives = 274/500 (54%), Gaps = 19/500 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARF----HRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++T I Y NA PHIGH Y  +I D + RF    H       +F+TGTDEHG KI +AA +
Sbjct: 20  VTTPIFYVNAAPHIGHLYSAVITDAIHRFNNLVHPTAQASSIFSTGTDEHGTKIQQAAAS 79

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V    +  Q S  +R +    +IS+  +IRTT+  H +  +  W  +   G IY   Y
Sbjct: 80  HSVPVDTYCQQISDRYRSLFRNFNISHTRYIRTTDPDHTEAVQCFWNALECSGSIYSAQY 139

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWY + DE +  ++++ +   G   +A+  +PV+W EE+ + FRL  YQD +L + +  
Sbjct: 140 SGWYCIPDETFLTENQLKENNLGVKVSAESGHPVEWTEEKNFMFRLEKYQDDVLYWIKGC 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            + I+PI+ R  ++ F++  L D+S+SR      WGI +P DP   +YVW+DAL NYLT 
Sbjct: 200 EDRIVPIKFRKILLDFLQEKLPDISISRPKSRVSWGIDVPSDPTQTVYVWLDALVNYLTV 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +GY   P       WP  + V+GKDIL+FH IYWPAFL++A L  P+K+  H      GE
Sbjct: 260 SGY---PQEGFVHRWPPTVQVLGKDILKFHGIYWPAFLIAAGLEPPRKLLVHSHWTVDGE 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP E       + +RYFL+RE     DG Y    + + +NA+LA+  GNL
Sbjct: 317 KMSKSKGNVVDPNERASLYTHEGIRYFLLREGVAHSDGNYSDTKIMRILNAELADTFGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH-------RAL 414
           +SR    +L + + ++P       +  S + V  ++L+ + E     + H         +
Sbjct: 377 LSRCCGKVL-NPEAVVPVVQQDEFNTLSQMDVTKKMLELLNELPDKCMTHYRQYNFYLVV 435

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             VI ++   + +F++  PW+LKK    +    +L VT+EV+RQ  I+LQ  VP ++ K+
Sbjct: 436 DSVIQVLHATNNFFESTAPWKLKKPEEKQQLQAILGVTMEVLRQAGIILQPIVPIMSGKL 495

Query: 474 FDILFVADENRCFQSLDQRL 493
            D L V    R +  L  +L
Sbjct: 496 LDKLSVERNRRLWTDLTLQL 515


>gi|291391982|ref|XP_002712314.1| PREDICTED: methionine-tRNA synthetase 2 [Oryctolagus cuniculus]
          Length = 612

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 189/523 (36%), Positives = 274/523 (52%), Gaps = 34/523 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL          +TGTDEHG KI +AA
Sbjct: 63  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSATATRLSTGTDEHGLKIQQAA 122

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     +S  DFIRTTE RH    +  W+ +  +G +YKG
Sbjct: 123 ATAGLAPIELCDRVSSQFQQLFQEAGVSSTDFIRTTEARHRLAVQHFWEVLKARGLLYKG 182

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G+         +PV W +EE Y FRLS +Q+ L 
Sbjct: 183 LYEGWYCASDECFLPEAKVTRQPGPSGESCPVSLESGHPVSWTKEENYIFRLSQFQEPLR 242

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 243 QWLRGNPQTITPEPFYHAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 302

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPA LL A L  P ++  H  
Sbjct: 303 VNYLTVIGY---PNDEFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLSPPHRICVHSH 359

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +E   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 360 WTVCGQKMSKSLGNVVDPRTCLEHYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 419

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400
           + +G L++R  +  +    G  P          PG    S      D +++   + + ++
Sbjct: 420 DALGGLLNRCTANRINP-SGTYPAFCTTCFPSEPGLMGPSVRARAEDYALVRAVATLPKQ 478

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           + ++  N  I++AL  V S V + + +     PW+L   NP  A    TVL+V +E +R 
Sbjct: 479 VADHFDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWENPADAPWLGTVLHVALECLRV 538

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              LLQ   P LA+K+   L V+   R    L  R  P F  H
Sbjct: 539 FGTLLQPVTPNLADKLLSRLGVSATERSLGKL--RFLPRFYGH 579


>gi|311272846|ref|XP_003133611.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 593

 Score =  326 bits (835), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 185/512 (36%), Positives = 270/512 (52%), Gaps = 32/512 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R HRL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVSSAAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHQLAVQHFWGVLKTRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P+ I P      V+ ++   L DLS+SR+     WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGDPQAITPEPFHRAVLQWLDEELPDLSVSRRRSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVIGY---PNAEFQSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGIPSWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400
           + +G L++R  +  +    G  P          PG    S      D +++S  + + ++
Sbjct: 401 DALGGLLNRCTAKRINP-SGTYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQ 459

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           + ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R 
Sbjct: 460 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPIDAPWLGTVLHVALECLRV 519

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P+LA+K+   L V+   R  + L
Sbjct: 520 FGTLLQPVTPRLADKLLSRLGVSATERGLREL 551


>gi|187736581|ref|YP_001878693.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426633|gb|ACD05912.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 550

 Score =  326 bits (835), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 193/520 (37%), Positives = 290/520 (55%), Gaps = 23/520 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+TAI Y N  PHIGHAYE ++ADVLAR+HR+ G +V F TG D+HGQK+ + A+  G+
Sbjct: 18  YITTAIDYTNGPPHIGHAYEKVLADVLARWHRMKGEEVYFLTGVDQHGQKVQQTAEKLGI 77

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  V+  +  F  + D L IS D +  TT+ RH    + +   + DKG +YK  Y G+
Sbjct: 78  TPQEHVNNITGQFLALWDRLGISNDGWASTTDPRHKACVQKILTDLKDKGQLYKKSYKGF 137

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+R E +  D E  + A+G  +  +   V  +EEE ++FRL+ + + +  + E   +F+
Sbjct: 138 YSVRQEQFLTDKE--RDAEGN-FGPEWGEVVELEEENWYFRLTDHVEWMKQFVEKSSDFV 194

Query: 188 LPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           LP  R+ EV++ +     DL +SR      WGI+ P DP+++ YVW DAL NY++  GYL
Sbjct: 195 LPSFRKAEVLNAIDFD-SDLCISRPKSRLSWGIEFPFDPEFVTYVWFDALINYISFAGYL 253

Query: 246 DNPDGSK---AKFWPADLHVIGKDIL-RFHAIYWPAFLLSANLP---LPKKVFSHGFILH 298
             PD      +K WPAD  VIGKDIL   H +YWPA L +       +P  +  HG+   
Sbjct: 254 AEPDSGLPEFSKLWPADCEVIGKDILVPAHGVYWPAMLHAMGFSDEEMP-TLLVHGWWNI 312

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS+GNV+DP  + E+ G + +RY+LVR+I  GKD  +D D L    N +LAN +
Sbjct: 313 NGEKMSKSIGNVVDPNLLAEQFGPEPVRYYLVRDITTGKDANFDADRLVMLYNTELANDL 372

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL +RS++M  +  D +I    A+  E+ +++ S   + +    + M + +   ALA +
Sbjct: 373 GNLCNRSINMTRRYCDSVISGAEAYDDEASKALRSTMDQAVTLFSKYMDDNMASDALAAL 432

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + VS  + Y + Q+PW+L K   +  R   VL   +E   Q   L+   +P  + +I  
Sbjct: 433 NAQVSACNAYIEQQQPWQLAKDEASAPRLRCVLRHLLECCAQTGYLIGCVLPDASARILG 492

Query: 476 ILFVADENRCFQSLDQRLKPGFML--HKTFD--PIFPRFL 511
            L   D  R        LK G +   H+  D  P+FPR L
Sbjct: 493 QLNAGDLFRGLTP--AALKWGILPAGHRINDPAPVFPRIL 530


>gi|46123063|ref|XP_386085.1| hypothetical protein FG05909.1 [Gibberella zeae PH-1]
          Length = 784

 Score =  326 bits (835), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 184/498 (36%), Positives = 270/498 (54%), Gaps = 42/498 (8%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ DVL R+  ++G +    TGTDEHG KI +AA   G++ K   D NS  FRD+A+V 
Sbjct: 1   MVLTDVLKRWKTINGKEAYLCTGTDEHGMKIQQAALKEGISPKELCDNNSNKFRDLAEVS 60

Query: 88  DISYDDFIRTTEKRHHDTCRILW---KKISDKG-DIYKGCYSGWYSLRDEAYYNDDEV-- 141
           +IS+D FIRTT++ H D  +  W   K  + +G  +YKG + GWY + DE +Y +D V  
Sbjct: 61  NISHDFFIRTTDQEHKDVVQQFWLLLKARAPEGLGLYKGKHEGWYCVSDECFYPEDLVEP 120

Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G          N V+W+ E  +FF LS Y+DKLL +Y+ +P++I P  R NEV 
Sbjct: 121 SVVPQTGRKIMASTETGNEVEWIAEHTWFFPLSRYKDKLLRFYDENPDWIQPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKA 253
           ++V++ L+DLS++R T   +WGI+ PDDP   +YVW+DAL NYLT  G+    + D +  
Sbjct: 181 NWVENHLEDLSVTRPTSRLNWGIRDPDDPTSTIYVWVDALVNYLTKAGFGTKWHADDADT 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+HV+GKDI+RFHA+YWPA L++A LPLPKK+  H        K+SKSLGNV++P
Sbjct: 241 GIWPADVHVVGKDIIRFHAVYWPALLMAAGLPLPKKILCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              +++  +D LRYFL+R  +   D  Y  + +      +L   IGNL +R    I ++ 
Sbjct: 301 FSAVQKWDLDPLRYFLMRNGSLKGDMSYSNESIMVIYEKELQANIGNLFNR----ISRNK 356

Query: 374 DGMIPTPGAFTESDE--------------------SILSVCSRVLQEIRENMQNQLIHRA 413
           +    T GA   +                      S+ S        IR +M    +  A
Sbjct: 357 NFSWSTLGAVQAARNGDFDNIESSVPRGDAAPDFFSLESTLHDAPTTIRRDMDEINLSNA 416

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKL 469
           L  V  L+ E +R+    +PW++ K+    A      V+Y   E +R   ILLQ  +P  
Sbjct: 417 LRGVFELLREANRFISDTEPWKMTKSEDPNAKVLINWVIYECAEAVRIAGILLQPIMPTK 476

Query: 470 ANKIFDILFVADENRCFQ 487
           A ++ D L V  E R  +
Sbjct: 477 AEELLDNLGVDRERRTVE 494


>gi|159903438|ref|YP_001550782.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888614|gb|ABX08828.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 509

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 183/461 (39%), Positives = 262/461 (56%), Gaps = 26/461 (5%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  I  D  +RF RL G  V F TG DEHGQKI + AQ+  +T
Sbjct: 5   ITTPLYYVNDKPHLGSTYTTIACDAYSRFQRLQGNTVEFVTGVDEHGQKIQRTAQSHQIT 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +V  D+ S N++++    DI+Y  FIRTT   H +     + K+   GDI  G   GWY
Sbjct: 65  PQVHCDKISLNYKELWKKWDITYTSFIRTTSPSHQELVNQFFDKVVKSGDILLGNQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D    K      +     P++W +EE  FF LS YQ K+ S   + P FI 
Sbjct: 125 CVGCEEYKDDPPDSKSPCCPIH---LKPLEWRDEENLFFALSKYQSKIESLV-AQPSFIQ 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN- 247
           P+ RRNE+++FV  GL+D S+SRK  +WGI +P    +  YVW DAL  YL++   + N 
Sbjct: 181 PLSRRNEILNFVSKGLRDFSISRKNVEWGIPVPGYKGHTFYVWFDALLGYLSSLLPMQNK 240

Query: 248 ---PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D S    WPA +HVIGKDILRFHAIYWPA L+SA L LPKKVF HGF+  +G+K+ 
Sbjct: 241 INLADLSHYG-WPASVHVIGKDILRFHAIYWPAMLMSAGLELPKKVFGHGFLTREGQKMG 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN++DP  ++E+ G D +R++L+ +I  G+DG + +   +  VN DLAN IGNL++R
Sbjct: 300 KSLGNILDPELLLEQYGKDPIRWYLLSDIRFGQDGDFQQKRFQDLVNNDLANTIGNLLNR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI-------HRALAQV 417
           + +M  K +D    TP      ++S L + +      +E++ + L+             V
Sbjct: 360 TSTMSRKWFDNG--TPDFDINLEDSNLKLLA------QESITSSLLAYEEFDFKTVCETV 411

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIR 456
           I L +E + Y +  +PW L K  +N +     LY  +E  R
Sbjct: 412 IKLATESNVYLNNTQPWTLIKEPSNKELVGYYLYNVLESCR 452


>gi|296205176|ref|XP_002749647.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 1
           [Callithrix jacchus]
          Length = 593

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 186/511 (36%), Positives = 271/511 (53%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRSPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRISEQFQQLFQEAGISCTDFIRTTEARHRVAVQQFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V    G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTWQPGPSGDSLPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H  
Sbjct: 284 VNYLTVIGY---PNAEFKFWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMILKDYD-------GMIPT-PGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +   +          P+ PG    S      D +++S  + + + +
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTNCFPSEPGLMGPSVRAQAEDYALVSAVATLPKRV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A   STVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWDSPVDAPWLSTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSVSERSLGKL 551


>gi|301622256|ref|XP_002940449.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 562

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/534 (35%), Positives = 288/534 (53%), Gaps = 38/534 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R  LY +T I Y NA PH+GH Y  ++ADV  R+  + G++   +TGTDEHG K+ +AA 
Sbjct: 34  RPHLY-TTPIFYVNASPHLGHVYSALLADVQHRYSAMCGIESRLSTGTDEHGMKVQQAAS 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +    F    S  FR++ D LDISY DF+RTTE RH +     W  + ++G IYKG 
Sbjct: 93  ALSLDPHTFCSSVSLQFRNIFDDLDISYTDFVRTTEPRHKEAVSRFWMTLEERGYIYKGT 152

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ------YYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWY   DEA+ ++ +  +  D +         + H  V W+ EE Y FRLS+ +  LL
Sbjct: 153 YEGWYCTSDEAFLSEGQTAERIDSEGNKIRVSLESGHQ-VHWVSEENYMFRLSSLRPALL 211

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
           ++ ++ P    P  R   V  +++  L DLS+SR+     WGI +P D  +++YVW+DAL
Sbjct: 212 NWLQTEPVHPAPFLRL--VHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLDAL 269

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+   A + P+  H++GKDILRFHAIYWPAFL++A L  P K+  H  
Sbjct: 270 VNYLTAAGY---PNLQLAPWGPST-HLLGKDILRFHAIYWPAFLIAAGLSPPHKLLVHSH 325

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSL NV+DP + I     D LRY+L+R  A  +D  +     +  +N++LA
Sbjct: 326 WTSEGTKMSKSLKNVVDPADCIRRYTKDGLRYYLLRHGAPERDCDFTHRTARTLLNSELA 385

Query: 356 NGIGNLVSRSVSMILK--------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           + +G L++R  +  +          YD     P A  +  + +L+    +  E+ + ++ 
Sbjct: 386 DALGGLLNRCTAPAINPMQHFPKFHYDSF---PSAAHDQLQGVLANLQNLPAEVDQWVKK 442

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQA 464
             +H+AL  + + V   + +F +Q PW+L++     A+   +V+YVT+E +R  A LLQ 
Sbjct: 443 FQVHKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYVTLESLRLYATLLQP 502

Query: 465 FVPKLANKIFDILFVADENRCFQS----LDQRLKPGFMLHKTFDP----IFPRF 510
            VP LA    + L V  E R  +        R +  +   +T  P    +FPR 
Sbjct: 503 AVPGLATAALERLGVPLEMRTLKGNTFLAATRGESCYFQGQTLGPEKGLLFPRL 556


>gi|86739206|ref|YP_479606.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566068|gb|ABD09877.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 521

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/481 (38%), Positives = 270/481 (56%), Gaps = 18/481 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++TAI Y N +PH+GHA E+I  D  AR  R  G +V F TGTD++  K  +AA+  
Sbjct: 15  RYFVTTAIPYVNGKPHVGHALELIETDAYARHLRQRGHEVRFQTGTDDNALKNVQAAEAE 74

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T   +V++ +  F  +   L +S+DDFI+T T+ RH      LW   +D+GD Y+  Y
Sbjct: 75  GITPAEYVERVATGFVGLRGPLGLSFDDFIKTSTDPRHRPGVEKLWSACADRGDFYRKTY 134

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183
           +G Y +  E +Y  DE+  G        +H  V   +EE  +FFRL  YQD+L +   + 
Sbjct: 135 AGLYCVGCELFYQPDELVDG-----RCPEHGTVPDLVEESNWFFRLGRYQDQLHALISTD 189

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              I P  R+ EV+SF+++GL+D S SR   +   WGI +P DP+ ++YVW DAL NY+T
Sbjct: 190 RLRIEPAARKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPEQVIYVWFDALGNYIT 249

Query: 241 TTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY ++ D  +  +  AD  +HVIGK I+RFHA+YWPA LLSA + LP  +F H ++  
Sbjct: 250 APGYGNDDDSFQYWWNDADRRVHVIGKGIIRFHAVYWPAMLLSAGVRLPDTIFVHEYLTA 309

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              KISKS GN  DP +++     DALR++++R++A   D  Y  + L  R N DLAN I
Sbjct: 310 DSMKISKSAGNAEDPADIVAAFNTDALRWWMLRDVARAGDTDYTTERLVTRANEDLANNI 369

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R+VSM+ +  DG+IP       +   + +V     + I +        RA   + 
Sbjct: 370 GNLVNRTVSMVKRYRDGLIPPLALDNPAAAKLRAVRDETPRTIDDAFAAFDFRRAAEVIT 429

Query: 419 SLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  E +RY +A +PWEL K       + D    VL   V   R+LA  L  F+P  A +
Sbjct: 430 RIGDEGNRYVEAARPWELAKAERKEGASRDALDAVLAELVATCRELAEHLAPFLPDSAPR 489

Query: 473 I 473
           I
Sbjct: 490 I 490


>gi|194745961|ref|XP_001955453.1| GF18774 [Drosophila ananassae]
 gi|190628490|gb|EDV44014.1| GF18774 [Drosophila ananassae]
          Length = 568

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 178/505 (35%), Positives = 273/505 (54%), Gaps = 29/505 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           +++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  FVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLKYPERKVRLCTGTDEHGTKIQQAAALH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + DQ S  +R++    +I  DDFIRTTE+RH       W+ ++ +G IY   YS
Sbjct: 81  KVPVATYCDQISERYREVFQNANILQDDFIRTTEERHKRAVAHFWRTLNSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD ++ + +  
Sbjct: 141 GWYCVSDETFLTDSQLKLDEATGARYSLESGHPVEWTEETNYMFRLSKFQDDVIHWVKQE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +PDD    +YVW+DAL NYL+ 
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDSSQTVYVWLDALVNYLSA 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   PD   + FWP    +IGKDIL+FH IYWPAFL++A L  P +++ H      G+
Sbjct: 260 LGY---PDEEYSAFWPPAQQIIGKDILKFHGIYWPAFLIAAGLQPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV++P++  E+  ++ LRYFL+RE     DG Y      + +N++LA+ +GNL
Sbjct: 317 KMSKSKQNVVNPVQAAEQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSELADTLGNL 376

Query: 362 VSRSVSMIL-----------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           +SR+ +  L           +    ++ +  A     ES+L +  R  Q    N      
Sbjct: 377 LSRACAKTLNPRQIYPSAQAEHLAEILGSLDAAKRLQESLLQLSERCAQHYESNH----F 432

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFV 466
           H      ++ +   + +F+  +PWELKK    +N  R  T++ +T++ +R   I+LQ  +
Sbjct: 433 HLVADTAMATLHAANNFFETSRPWELKKGAAGSNEPRLETIIAMTMDALRLCGIVLQPII 492

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P+LA ++ D L V    R +  L +
Sbjct: 493 PQLATRLLDKLSVPATQRGWNYLAE 517


>gi|119181183|ref|XP_001241833.1| hypothetical protein CIMG_05729 [Coccidioides immitis RS]
          Length = 581

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/518 (35%), Positives = 271/518 (52%), Gaps = 47/518 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +R+  Y++T I Y NA PH+GH Y +++AD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 47  QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G+      DQN + F+D+A   ++ +D FIRTT+  H D  +  W+ +  +G IY 
Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y  + V+   D                V+W  E  Y FRLSA++D+
Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWSSETNYHFRLSAFKDR 226

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P FI P    + ++  V SGL DLS+SR  +   WGI++P D    +YVW+D
Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVI------------GKDI-LRFHAIYWPAFLL 280
           AL NYLT  GY   P       WPA++HV+            G D+  RFH +YWPAFL+
Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVFARSSQKADACPGADLDARFHCVYWPAFLM 346

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + +LPLP++V SH       EK+SKS GNV++P+  +   GVD LR++L  +     D  
Sbjct: 347 ALDLPLPRQVLSHAHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDAD 406

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILS 392
           Y+   + +R    L  G+GNL SR V          I    +G  P P   +E+D     
Sbjct: 407 YENAFVTERYKKTLQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPP---SEADRKHQQ 463

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +   +    R  M +    +A+  V+ ++ E +             T P   S V+Y T 
Sbjct: 464 LLEGIRNVTRSWMDDLNPRKAVESVVGIIHESE------------NTEPTELSRVIYNTA 511

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQS 488
           E +R   ILLQ F+P+ + ++ D+L VA   E R F++
Sbjct: 512 ESLRIAGILLQPFMPEKSARLLDMLGVAGDPEKRSFEA 549


>gi|195570957|ref|XP_002103470.1| GD20436 [Drosophila simulans]
 gi|194199397|gb|EDX12973.1| GD20436 [Drosophila simulans]
          Length = 582

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/529 (35%), Positives = 279/529 (52%), Gaps = 42/529 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL    LDV   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV    + D  S+ +R++     I  DDFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +PDD    +YVW+DAL NYL++
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   PD   +  WP    VIGKDIL+FH IYWPAFLL+A L  P +++ H      G+
Sbjct: 260 VGY---PDEKFSVHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408
           +SR+ +  L    G I P+  A   +D            +S+L +  R       N    
Sbjct: 377 LSRASAKSLN--PGQIYPSTSAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464
             H      ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ 
Sbjct: 432 -FHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQP 490

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLK---------PGFMLHKTFD 504
            +P+LAN++ D L V    R +  L +            PGF   +  D
Sbjct: 491 IIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSHPGFGESRQLD 539


>gi|195329048|ref|XP_002031223.1| GM25865 [Drosophila sechellia]
 gi|194120166|gb|EDW42209.1| GM25865 [Drosophila sechellia]
          Length = 582

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/529 (35%), Positives = 278/529 (52%), Gaps = 42/529 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL    LDV   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV    + D  S+ +R++     I  DDFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GVPVAKYCDDISQRYREVFSSASIQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +PDD    +YVW+DAL NYL++
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   PD   +  WP    VIGKDIL+FH IYWPAFLL+A L  P +++ H      G+
Sbjct: 260 VGY---PDEKFSVHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPLKAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408
           +SR+ +  L    G I P+  A   +D            +S+L +  R       N    
Sbjct: 377 LSRASAKSLN--PGQIYPSTSAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464
             H      ++ +   + +F++ KPW LK   PD    R  T++ +T+  +R   I+LQ 
Sbjct: 432 -FHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMNALRLSGIVLQP 490

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRL---------KPGFMLHKTFD 504
            +P+LAN++ D L V    R +  L +            PGF   +  D
Sbjct: 491 IIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSNPGFGESRQLD 539


>gi|198282147|ref|NP_001092441.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|182689574|sp|A6H7E1|SYMM_BOVIN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|148878169|gb|AAI46212.1| MARS2 protein [Bos taurus]
 gi|296490436|gb|DAA32549.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
          Length = 593

 Score =  323 bits (828), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 182/512 (35%), Positives = 269/512 (52%), Gaps = 30/512 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKA 61
            + Y +T I Y NA PHIGH Y  ++AD L R HRL         F+TGTDEHG KI +A
Sbjct: 43  SRAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQA 102

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG+      D+ S  F+ +    DIS  DFIRTTE RH    +  W  +  +G +YK
Sbjct: 103 AAAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYK 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWY   DE +  + +V +  G  G          +PV W +EE Y FRLS +++ L
Sbjct: 163 GLYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPL 222

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
             +    P+ I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DA
Sbjct: 223 QQWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDA 282

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   PD     +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H 
Sbjct: 283 LVNYLTVVGY---PDAEFKSWWPNTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHS 339

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++L
Sbjct: 340 HWTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYYDEKVVKLLDSEL 399

Query: 355 ANGIGNLVSRS--------------VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           A+ +G L++R                +       G++   G     D +++S  + + ++
Sbjct: 400 ADALGGLLNRCTANKINPSGIYPAFCATCFPSEPGLVGPSGRAQAEDYALVSAVATLPKQ 459

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           + ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R 
Sbjct: 460 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRV 519

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P LA+++   L V+   R    L
Sbjct: 520 FGTLLQPVTPSLADRLLSRLGVSSTERSLGEL 551


>gi|110331789|gb|ABG67000.1| methionine-tRNA synthetase 2 precursor [Bos taurus]
          Length = 589

 Score =  323 bits (828), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 182/512 (35%), Positives = 269/512 (52%), Gaps = 30/512 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKA 61
            + Y +T I Y NA PHIGH Y  ++AD L R HRL         F+TGTDEHG KI +A
Sbjct: 39  SRAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG+      D+ S  F+ +    DIS  DFIRTTE RH    +  W  +  +G +YK
Sbjct: 99  AAAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYK 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWY   DE +  + +V +  G  G          +PV W +EE Y FRLS +++ L
Sbjct: 159 GLYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPL 218

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
             +    P+ I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DA
Sbjct: 219 QQWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDA 278

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   PD     +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H 
Sbjct: 279 LVNYLTVVGY---PDAEFKSWWPNTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHS 335

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++L
Sbjct: 336 HWTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYYDEKVVKLLDSEL 395

Query: 355 ANGIGNLVSRS--------------VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           A+ +G L++R                +       G++   G     D +++S  + + ++
Sbjct: 396 ADALGGLLNRCTANKINPSGIYPAFCATCFPSEPGLVGPSGRAQAEDYALVSAVATLPKQ 455

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           + ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R 
Sbjct: 456 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRV 515

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P LA+++   L V+   R    L
Sbjct: 516 FGTLLQPVTPSLADRLLSRLGVSSTERSLGEL 547


>gi|47459150|ref|YP_016012.1| methionyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458479|gb|AAT27801.1| methionyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 509

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 180/511 (35%), Positives = 289/511 (56%), Gaps = 11/511 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YIST I YPN   H+GH Y M IA  +  + +L G   L  TG+DEHGQKI ++A+ 
Sbjct: 2   KKFYISTPIFYPNGDLHLGHLYSMSIAWAIRNYKKLKGYQTLLLTGSDEHGQKIMQSAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++ K FVDQ +  F+      DI YD F+RTT+K+H+     +  K+++   IYK  Y
Sbjct: 62  NNLSPKNFVDQQAEKFKSFWKKFDIEYDVFVRTTDKKHNSVIEKILTKLNENNFIYKSFY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            G YS+ DE +    +  K  +G++++   N  ++ ++EE YF ++S +Q+ L  Y E +
Sbjct: 122 EGLYSISDEEFLTKTQA-KEVNGKFFHPVSNHELKIVKEESYFLKISQFQNWLKKYLEDY 180

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI   +  NE+ S F+   L+DLS+SR +FDWGIK   D ++I YVW+DAL +YL+  
Sbjct: 181 PNFISSQKVINELKSTFLNEKLEDLSISRNSFDWGIKFSFDNKHIAYVWVDALFSYLSPL 240

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
               N +   +  W  D   +HV+GK+I RFH IYWP  L   NLPLP K+ SHG+++  
Sbjct: 241 ELFLNQEKFNSS-WNDDVEKIHVVGKEITRFHGIYWPIMLKMLNLPLPNKILSHGWLITS 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GN+++P++++EE   + ++ +L+   +  +DG +DK+ +K   N+ LAN  G
Sbjct: 300 TGKMSKSKGNIVNPLDLLEEFDSETIKLYLLSAFSINRDGVFDKENIKFFYNSFLANNYG 359

Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL+SR  S+  +++   I     +  + D SIL    +  ++   N  N  I +A+  +I
Sbjct: 360 NLISRVSSLFSQNFSSKISWDQNSLDKIDYSILDKIEKSKEDFMSNFDNFEIDKAVEILI 419

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E++ Y D  K W L K +  R +T+L + +  I  ++  L+ F+P    KI    F
Sbjct: 420 KLGNELNGYVDLTKAW-LLKDDKKRLATILLILINGIYAMSAYLKIFMPLKIEKIERDFF 478

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
              +N   ++++   K   +  K  + IF R
Sbjct: 479 --QQNASLENIENWKKFDDIFIKKIESIFNR 507


>gi|146318899|ref|YP_001198611.1| methionyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145689705|gb|ABP90211.1| Methionyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 602

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 173/460 (37%), Positives = 276/460 (60%), Gaps = 21/460 (4%)

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G YSG
Sbjct: 1   MTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSG 60

Query: 127 WYSLRDEAYYND---DEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL+ ++
Sbjct: 61  WYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFF 120

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL NY 
Sbjct: 121 NAHPDFIQPAGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALLNYA 180

Query: 240 TTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG+ + 
Sbjct: 181 TALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGWFVM 240

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN +
Sbjct: 241 KDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVDRINYELANDL 300

Query: 359 GNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL  V
Sbjct: 301 GNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRALEAV 360

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   +N I 
Sbjct: 361 WNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTTSNAIM 419

Query: 475 DILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + L +      EN  F      L  G  +     PIFPR 
Sbjct: 420 EQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 455


>gi|164663379|ref|XP_001732811.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
 gi|159106714|gb|EDP45597.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
          Length = 532

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 179/514 (34%), Positives = 268/514 (52%), Gaps = 35/514 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--------------DGLDVLFTTG 50
           +  Y++T I Y NA+PHIGH +  ++ADVL R+  L              +    L TTG
Sbjct: 3   KPFYVTTPIFYVNAEPHIGHLHSSVMADVLRRYAELRYRGWSTYGTIPNDETTRALMTTG 62

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
           TDEHG KI + A+  GV  +   D+ S+ F  +A   DI    FIRTTE  H    + +W
Sbjct: 63  TDEHGLKIQRVAETMGVEPRALCDRVSQRFEALARAADIEPTRFIRTTEDTHIAAVQHVW 122

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNP------VQWMEE 162
            K++  G IY G + GWY++ DEA+Y + ++   K   G      +        V+W  E
Sbjct: 123 NKLACHGHIYLGEHQGWYAVSDEAFYPESQICATKQQSGSSSETVYTSIETGQRVEWTTE 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKI 220
             Y FRLSA+Q  LL + E++ E I P    + V++ V+SGL+DLS+SR      WGI +
Sbjct: 183 TNYKFRLSAFQQPLLDWLENNREVIQPSNMYDHVLAEVRSGLQDLSISRLRSRLTWGIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
           P DPQ+ MYVW+DAL NY+T  GY     G     WPAD+H++GKDI+RFHAIYWPAFL+
Sbjct: 243 PGDPQHTMYVWMDALVNYMTALGYPHMQPG-----WPADVHIVGKDIVRFHAIYWPAFLM 297

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDG 339
           +A LPLP+ + +H        K+SKS GN I+P   +   GVD +RY+L+R     G D 
Sbjct: 298 AAGLPLPRTIVAHSHWTVNKAKMSKSKGNAINPFHALHTYGVDTMRYYLMRIGGHIGTDA 357

Query: 340 FYDKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            Y    L++     L   +GNL+SR     +   L     ++  P  + E+++ ++  C+
Sbjct: 358 DYAPALLEEHKRKFLQGQLGNLLSRVLAPKIQARLTGTGLLLARPTHWAEAEKRLIHACT 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +      +MQ     +A+  V  +++  +       PW    T  D     ++ + E +
Sbjct: 418 HLPPTFDAHMQAYEPSKAIQAVFDVIALTNELVQHSAPWS-TDTPLDAVHRCVFASCEAL 476

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           R   +LLQ  +P+    + + L V    R + SL
Sbjct: 477 RLCGVLLQPVMPRAMTTLLNELQVPASQRTWDSL 510


>gi|116070585|ref|ZP_01467854.1| methionine--tRNA ligase [Synechococcus sp. BL107]
 gi|116065990|gb|EAU71747.1| methionine--tRNA ligase [Synechococcus sp. BL107]
          Length = 514

 Score =  322 bits (825), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 182/478 (38%), Positives = 263/478 (55%), Gaps = 17/478 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  +  D LARF RL   DVLF TG DEHGQKI + A+   ++
Sbjct: 5   LTTPLYYVNDKPHLGSTYTTLACDALARFKRLTQNDVLFITGVDEHGQKIQRTAEQKNIS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                DQ S  ++D+    DIS D F+RTT  RH +     ++++   GDI  G  +GWY
Sbjct: 65  PMAHCDQVSERYQDLWSRWDISQDRFVRTTNPRHLELVEQFYERVKASGDIVTGRQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + +D +     D Q    Q   ++W +EE  FFRLS YQ ++     ++ +FI 
Sbjct: 125 CVGCEEFKDDPD--DAVDPQCPIHQKT-LEWRDEENLFFRLSRYQREIEELI-ANDDFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR EV +FV  GL+D S+SR    WGI +P  P +  YVW DAL  YLT    LD  
Sbjct: 181 PASRRQEVRNFVARGLRDFSISRVNVSWGIPVPGHPGHTFYVWFDALLGYLT--ALLD-- 236

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG            WPA +HVIGKDILRFHA++WPA L+SA L LPK+VF HGF+  +G+
Sbjct: 237 DGGSVDLDRLADSGWPASVHVIGKDILRFHAVFWPAMLISAGLSLPKRVFGHGFLTREGQ 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP  ++E+ G DA+R++L+R+I  G DG + +      VN DLAN IGNL
Sbjct: 297 KMGKSLGNVLDPELLLEKCGTDAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K +D  +P     +  +  +       +  +   M       A   ++ L 
Sbjct: 357 LNRTSSMARKWFDDSVPPHSVESHINHPLALKAQATIATVMRCMPELGFKAASESILQLA 416

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + + +   PW   K   +  S    LYV +E  R + +LL   +P L+++I + L
Sbjct: 417 IAANGHLNDTAPWSRMKQQGEEQSVANDLYVVLESTRIVGLLLAPLLPDLSSRILNQL 474


>gi|33861424|ref|NP_892985.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33634001|emb|CAE19326.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 511

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/502 (35%), Positives = 285/502 (56%), Gaps = 12/502 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  +I D +AR+ RL G DV+F TG DEHG KI + A+N GV 
Sbjct: 5   ITTPLYYVNDKPHLGSIYTTLICDSIARYKRLTGADVIFITGVDEHGLKIQRTAKNKGVE 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  F+      DI+++ F+RT+ ++H    +  + ++    DIY G   GWY
Sbjct: 65  PQFHCDEISDIFKQNWKNWDITHNKFVRTSSQKHEYIVKEFYNRVKKSDDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E + ++ +    +           ++W  EE  FF+LS YQ ++    +  P FI 
Sbjct: 125 CVGCEEFKDNPD---NSPTHKCPIHQKTLEWKNEENLFFKLSKYQSQIEELIK-EPAFIQ 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDN 247
           P ERRNE+I+FV  GLKD S+SR    WGI +PD   +  YVW DAL  Y++     +  
Sbjct: 181 PKERRNEIINFVSKGLKDFSISRTNVSWGISVPDIDNHTFYVWFDALLGYVSAISLDMKE 240

Query: 248 P--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           P  D S    WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKV+ HGF+  +G+K+ K
Sbjct: 241 PSLDESIDNGWPADIHLIGKDILRFHAVYWPAMLISAGMKVPKKVYGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP  ++ + G +A+R++L+++I  G+DG +        +N DLAN IGNL++R+
Sbjct: 301 SLGNVLDPDILLSKYGKEAVRWYLLKDITLGQDGDFQNKRFVDIINNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  K +D  +P+    ++ D S+     + ++    +  +  +  A   ++SL    +
Sbjct: 361 SSMSRKWFDNRVPSNEMLSK-DNSLELYAKKTVENYFRHFNSYELDLAANVILSLAINTN 419

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y + ++PW L K   N    S ++Y  +E  R + +LL   +P L++KI   L +    
Sbjct: 420 LYLNEKQPWTLIKDEKNIPLVSNIIYNVLESTRIVGLLLLPILPNLSSKIDQQLGLLYNE 479

Query: 484 RCFQSLDQRLKPGFMLHKTFDP 505
           +   S  ++L  G ++H++  P
Sbjct: 480 KG--SWKKQLDWGKLIHESILP 499


>gi|195109831|ref|XP_001999485.1| GI24536 [Drosophila mojavensis]
 gi|193916079|gb|EDW14946.1| GI24536 [Drosophila mojavensis]
          Length = 579

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 180/513 (35%), Positives = 270/513 (52%), Gaps = 31/513 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKI 58
           ++ R   Y++T I Y NA PHIGH Y  +IAD   R+HRL   D  V   TGTDEHG KI
Sbjct: 14  VRCRSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYHRLRYPDTEVRLCTGTDEHGTKI 73

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +AA    V    + D+ S  +R++     I YDDFIRTTE+RH       W ++  +G 
Sbjct: 74  QQAAAAHEVPVGQYCDEISARYREVFKAARIEYDDFIRTTEQRHKLAVSDFWHRLQSRGY 133

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           IY   YSGWY + DE +  D ++   + +  +Y     +PV+W EE  Y FRLS +QD +
Sbjct: 134 IYSAAYSGWYCVSDETFLTDSQLRLDEASGARYSLESGHPVEWTEETNYMFRLSQFQDDV 193

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
             + +     I P +    ++  +   L D+S+SR      W I +P+D    +YVW+DA
Sbjct: 194 RHWVQQEAR-IRPAKFEKILLDTLSEPLPDVSISRPANRVHWAIPVPNDETQTVYVWLDA 252

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYL++ GY   P+      WP    VIGKDIL+FH IYWPAFLL+A L  P+++  H 
Sbjct: 253 LINYLSSLGY---PNEQYLAHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPRQLHVHS 309

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS  NV+DP+E  ++  ++ LRYFL+RE     DG +      + +N++L
Sbjct: 310 HWTVDGQKMSKSKHNVVDPVEAAKQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSEL 369

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG------------AFTESDESILSVCSRVLQEIR 402
           A+ +GNL+SR+ +  L  +  M P P             A     E++  +  R  Q   
Sbjct: 370 ADTLGNLLSRACAKSLNPHQ-MYPEPHVEHLSQLLQHLDAGKRLQEALFHLAGRCEQHYE 428

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQL 458
            N      H      I+ +   + +F+  KPWELK      N  R  T++ +T++ +R  
Sbjct: 429 GNH----FHLVADTAIAALHAANNFFECAKPWELKAGGSSPNAQRLQTIIAMTMDALRLC 484

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I+LQ  +P+L +++ D L V    R ++ L +
Sbjct: 485 GIVLQPMMPQLTSRLLDKLNVPIAQRSWRHLGE 517


>gi|330947142|ref|XP_003306845.1| hypothetical protein PTT_20116 [Pyrenophora teres f. teres 0-1]
 gi|311315437|gb|EFQ85056.1| hypothetical protein PTT_20116 [Pyrenophora teres f. teres 0-1]
          Length = 513

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 176/484 (36%), Positives = 259/484 (53%), Gaps = 28/484 (5%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ DV+ R+H L G   L  TGTDEHG K+ +AA  AG+  K F D+ +  F+++A   
Sbjct: 1   MVLTDVVKRWHLLKGEKALLCTGTDEHGLKVQRAAAKAGIDPKSFCDKGAEIFKELARKA 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY----- 142
           +I+ D F+RTT++ H +  +  W  + +KG IY+  + GWYS+ DE +Y    V      
Sbjct: 61  EITNDHFVRTTDREHKEAVQYAWFLLQEKGLIYEQKHEGWYSVTDECFYPQSGVQPYLDP 120

Query: 143 -KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G          + V+W  EE Y FRLSA++DKLL +Y+++PE+I+P  R N+V+  V+
Sbjct: 121 PTGRKIMTSIETGSEVEWSSEENYHFRLSAFRDKLLEFYKNNPEWIVPETRMNDVVQAVE 180

Query: 202 SGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           SGL+DLS+SR      WGI++P D    +YVW+DAL NY T  GY   P   +   WPAD
Sbjct: 181 SGLEDLSISRPYDRLTWGIRVPGDDSQTIYVWLDALMNYATKAGYPWTPGREQEGGWPAD 240

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            HVIGKDI+RFH IYWPAFL++  LPLPKK+ +H      G K+SKS G V+DP   I+ 
Sbjct: 241 CHVIGKDIVRFHCIYWPAFLMALGLPLPKKILTHAHWTLGGSKMSKSTGKVVDPFLAIDR 300

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D +R+++VRE     D  YD   +  + +  L   +GNL SR V        G I  
Sbjct: 301 FGSDVMRFYMVREGGIRDDASYDNARIIMQYDKFLRQNLGNLASRVVRGKGWSVRGAIER 360

Query: 380 PGAFTESD-----------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            G  +  D            S+ ++ S    E           RA+  +   +   + +F
Sbjct: 361 IGGRSAEDWEEGPGSKFRKNSLATIAS----ETNAAFDAYDPRRAVFGITEFIRGTNAFF 416

Query: 429 DAQKPWE----LKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               PW+         P +    ++Y++ E +R   ILLQ ++P  AN++ D L V  + 
Sbjct: 417 TMSAPWDKILNFGPGEPGEDVDKIIYLSAEALRIAGILLQPYMPNKANRLLDQLGVHRDR 476

Query: 484 RCFQ 487
           R F+
Sbjct: 477 RTFE 480


>gi|254525465|ref|ZP_05137517.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221536889|gb|EEE39342.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 514

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/457 (39%), Positives = 255/457 (55%), Gaps = 18/457 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   G+ 
Sbjct: 5   ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIE 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D  S+ F +     +IS+D FIRT+ K H       +K++    DIY G   GWY
Sbjct: 65  PKSHCDAISKVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYKRVKASDDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  E + ++ E        Y    H   ++W  EE  FFRLS YQ K +    + P FI
Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT------T 241
            PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++      T
Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDAT 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
              L N   S  K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+
Sbjct: 240 EHLLKN---SINKGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQ 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL
Sbjct: 297 KMGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K +D  +P       S+  + +     ++    N  N  +  A  +V+SL 
Sbjct: 357 LNRTSSMSRKWFDNKVPNNEKIL-SENKLENFAQIAVKNYIYNFDNYKLDLAANEVLSLA 415

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456
              + Y +  +PW L  +K N      ++Y  +E  R
Sbjct: 416 INTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTR 452


>gi|123966181|ref|YP_001011262.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123200547|gb|ABM72155.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 511

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 170/453 (37%), Positives = 256/453 (56%), Gaps = 10/453 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  +I D +ARF RL G +V+F TG DEHG KI + A N GV 
Sbjct: 5   ITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASNKGVD 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ S  F+      DI+ + F+RT+ + H       + ++   GDIY G   GWY
Sbjct: 65  PQSHCDEISDIFKQNWKSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +  + E         +  Q N ++W  EE  FFRLS YQ ++     + P FI 
Sbjct: 125 CVGCEEFKENPENLSSYKCPIH--QKN-LEWKNEENLFFRLSKYQSQIEELI-NEPSFIY 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN 247
           P ERRNE+I+FV  GLKD S+SR    WGI +PD   +  YVW DAL  Y++     + +
Sbjct: 181 PKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNMSD 240

Query: 248 P--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           P  + S    WPAD+H IGKDILRFHA+YWPA LLSA + +PK+VF HGF+  +G+K+ K
Sbjct: 241 PSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP  ++ + G +A+R++L+++I+ G DG +        +N DLAN IGNL++R+
Sbjct: 301 SLGNVLDPNLLLSKYGKEAVRWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLNRT 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SM  K +D  +P        D ++   C+  +++   +     +  A   +++L    +
Sbjct: 361 SSMSRKWFDNKVPDTYELI-IDNTLQLCCNEAVEKFINHFNLYELDLAANVILNLAINTN 419

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIR 456
            Y + ++PW+L K   N      ++Y  +E  R
Sbjct: 420 LYLNEKQPWKLIKDENNISIVCNIIYDVLESTR 452


>gi|308803669|ref|XP_003079147.1| Methionyl-tRNA synthetase, class Ia (ISS) [Ostreococcus tauri]
 gi|116057602|emb|CAL53805.1| Methionyl-tRNA synthetase, class Ia (ISS) [Ostreococcus tauri]
          Length = 577

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 192/521 (36%), Positives = 298/521 (57%), Gaps = 28/521 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N QPHIGH Y   +AD  AR+ R  G DV F TGTDEHG K+ ++A   G+
Sbjct: 53  YVTTPIYYVNDQPHIGHVYTSTVADAYARYARARGADVFFLTGTDEHGLKVEQSADKRGI 112

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             +   D+NS+ FRD+    DIS+DDFIRTT+ RH    R L + + ++  +Y G + GW
Sbjct: 113 EPQALADENSQKFRDVMTSYDISFDDFIRTTDARHERQVRALVEALQERDAVYLGQFEGW 172

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E YY + +  K  D +   +  + V+   EE Y+FRLS +Q +L + +  +PEF+
Sbjct: 173 YDEGQEEYYTESKA-KELDYKSPISGKDMVR-SSEENYYFRLSKFQKELEALHADNPEFL 230

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            P  RRNE+I  +  GL D+ +SR  F WGIK+P+D ++++YVWIDAL NY+T  G  D 
Sbjct: 231 TPSARRNEMIQRLNEGLNDVPISRTNFKWGIKMPEDEKHVIYVWIDALMNYITAIGVGDG 290

Query: 248 PD----GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            D      ++K+WPA +H++ K+I  FH++ WPA L++ +LPLP++V +H F + +G K+
Sbjct: 291 KDDAVYSERSKYWPASVHIMAKEISWFHSVIWPALLMALDLPLPQRVHAHAFWIREGRKM 350

Query: 304 SKSLGNVIDPI---EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIG 359
           SKSLGN +D        E  G+DA+RY+L  E   G  D  +  D +++  ++DL N +G
Sbjct: 351 SKSLGNFVDLACMDRFKEHYGLDAIRYYLAVEGPIGANDANFSADRVQEIYSSDLVNTLG 410

Query: 360 NLVSRSVSMILKDYDGMIPTP---GA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N VSR+ +M+ K +DG + +    GA  T  +  + +  S  +++  +      + RA A
Sbjct: 411 NSVSRTTAMVNKYFDGEVQSEELNGARVTFENWDMPARTSACVEDALKAYDKLDLPRAAA 470

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
               ++ +VD +    +P+ + K    RA  S  LY  +E +R   +LL+  +P   NK+
Sbjct: 471 AAKQIIMDVDVFITETEPFRMAKDASKRAELSACLYQCLESLRIACVLLEPLMP---NKM 527

Query: 474 FDILFVADENRCFQSLDQR-----LKPGFMLHKTFDPIFPR 509
            +  F A       ++D+R     LKPG  + K    +FPR
Sbjct: 528 AE--FDAGVGLGEGTMDERTTWGGLKPGTKVQKL--ALFPR 564


>gi|21358483|ref|NP_650348.1| Methionyl-tRNA synthetase [Drosophila melanogaster]
 gi|75026854|sp|Q9VFL5|SYMM_DROME RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|17861592|gb|AAL39273.1| GH13807p [Drosophila melanogaster]
 gi|23171238|gb|AAF55037.2| Methionyl-tRNA synthetase [Drosophila melanogaster]
 gi|220945160|gb|ACL85123.1| Aats-met-PA [synthetic construct]
 gi|220954980|gb|ACL90033.1| Aats-met-PA [synthetic construct]
          Length = 582

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 184/501 (36%), Positives = 275/501 (54%), Gaps = 25/501 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV    + D  S+ +R++     I  DDFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              + P +    ++  +   L D+S+SR +    W I +PDD    +YVW+DAL NYL++
Sbjct: 201 AR-VRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   PD   +  WP    VIGKDIL+FH IYW AFLL+A L  P +++ H      G+
Sbjct: 260 VGY---PDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD-ESILSVCSRV---LQEIRENMQNQL----IHR 412
           +SR+ +  L    G I P+P A   +D    L V  R+   L ++ E  ++       H 
Sbjct: 377 LSRASAKSLN--PGQIYPSPSAEHLADLLRSLDVAKRLQDSLLQLSERCESHYECNHFHL 434

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPK 468
                ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ  +P+
Sbjct: 435 VADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQ 494

Query: 469 LANKIFDILFVADENRCFQSL 489
           LAN++ D L V    R +  L
Sbjct: 495 LANRLLDKLSVPTAQRGWNYL 515


>gi|240047446|ref|YP_002960834.1| methionyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985018|emb|CAT05011.1| Methionyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 512

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 276/479 (57%), Gaps = 8/479 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++ Y++T I Y +   HIGH Y   IA V+  + +L G D    TG+DEHGQKI + AQ
Sbjct: 3   KKRFYVTTPIYYASGNLHIGHLYTTTIAWVIKNYKKLQGYDARLLTGSDEHGQKIFQKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  + FVDQ +  F+++ ++ +I YD F RTT   H +    ++ ++  KG I+K  
Sbjct: 63  ENQLEPQFFVDQVANKFKNLWEIFEIDYDYFSRTTSDFHKEYVSKIFDEMLAKGFIFKDF 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +    +  K  DG Y+    + ++++EEE +FF +   Q  LL ++++H
Sbjct: 123 YKGLYSVSDEEFLTPKQAIKKDDGYYHPVSGSKMEYIEEESFFFDMKKMQSWLLDFWKNH 182

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI   +  NE+I +F++ G+++LS++R + +WGI +   P +++YVW+DAL NY++  
Sbjct: 183 PQFISEKKIENELIKNFLEKGIENLSVTRTSLEWGIPVKSQPGHVIYVWLDALFNYISAL 242

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             LD  +     FW      +HV+GK+I RFH IYWP FL S NL LP  + +HG+++  
Sbjct: 243 KPLDK-NSDFDTFWNQSEQIVHVVGKEITRFHCIYWPIFLQSLNLRLPSNIITHGWLITP 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP+E+I++  V+ ++ F   +I  G+DG +D+  L    N+ LAN  G
Sbjct: 302 EGKMSKSKGNVVDPLELIKKHDVETIKLFFASQIILGQDGIFDEHNLNLFYNSTLANNFG 361

Query: 360 NLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL+SR+++MI K++D  +I       E+D  I     +   +  +   N  + +AL   I
Sbjct: 362 NLISRTIAMINKNFDTPLIYNKELLDENDVYIYKQIEQTHYQFIDLFDNLEVDKALKLAI 421

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SL   ++ Y D QKPW +  +  ++ S VL   +  I  +  +    +PK + KI  IL
Sbjct: 422 SLSKNLNSYIDIQKPWLI--SQKEKLSVVLLALLNGIYAVNTMFSVVMPKNSKKILAIL 478


>gi|242017977|ref|XP_002429460.1| methionyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212514392|gb|EEB16722.1| methionyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 551

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 280/491 (57%), Gaps = 21/491 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I Y NA+PHIGH Y   I D ++R+ +L   +V +  GTDEHG K++KAA+   +
Sbjct: 34  FLTTPIFYVNAEPHIGHLYTTTIGDAISRYKKLKNCNVKYMVGTDEHGLKVSKAAKALNL 93

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F D  S  ++ + +  DI Y+DFIRTTEKRH  T   LW KIS    IYKG YSGW
Sbjct: 94  NVETFCDNVSEKYKSLFNAFDIRYNDFIRTTEKRHKKTAIELWDKISSVDLIYKGEYSGW 153

Query: 128 YSLRDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           Y   DE +  ++E+    D   +Y   +   V ++ E  Y F+LS +Q+ LL + +S  E
Sbjct: 154 YCEADETFIPENELEPNDDPLVRYTLNEKKIVNYVTELNYKFKLSKFQNDLLHWLDSG-E 212

Query: 186 FILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            I P + +  + ++++ G  LKDLS+SR T    WGI +P DP    YVW DAL++YL+T
Sbjct: 213 IIKPNKFQKILRNWIEEGNVLKDLSISRPTERVSWGIPVPKDPTQTFYVWFDALSSYLST 272

Query: 242 TGYLDNPDGSKAKF-WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY        + F WP DL +IGKDIL+FH ++WPAFL++A L  PK +  H   +   
Sbjct: 273 DGY------PYSNFKWPPDLQIIGKDILKFHGVFWPAFLMAAGLEPPKCILCHSHWMKDN 326

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            KISKS GNVI+P    E+   D +RY+L++E     DG +    L   +NADLA+  GN
Sbjct: 327 MKISKSTGNVINPFSYAEKYSSDGVRYYLLKEGVAHSDGNFTDKKLIAMLNADLADKFGN 386

Query: 361 LVSRSVSMIL---KDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           L+ R  S+ +   + Y   +        T   E++++    +  ++  + ++   ++ + 
Sbjct: 387 LLLRCTSLTINRNQKYPSFLKGDRKRFHTTDSENLINALQDLPDKVDMHFEDFNFYKGID 446

Query: 416 QVISLVSEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++I+ +S  +++F+++KPW L  K    D  + V+++T+E +R   ILLQ  +PK++  +
Sbjct: 447 EIITTLSLTNKFFESEKPWYLANKSDESDHLNYVIHLTMESLRVCGILLQPIIPKISENL 506

Query: 474 FDILFVADENR 484
            + L +    R
Sbjct: 507 LNKLSIPISKR 517


>gi|254503294|ref|ZP_05115445.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439365|gb|EEE46044.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 508

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 281/509 (55%), Gaps = 11/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHA+  I+AD+L R     G +++ +TG DEHGQK  +AA+  
Sbjct: 4   KSYITTPIYYVNGSPHIGHAFTSIMADILKRNREALGYEMMLSTGVDEHGQKNQEAAEAL 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +    ++D   + FRD+ + + + +D F+RT+ + H      + ++I DKG I K  Y+
Sbjct: 64  DMPVTDYLDMRCKEFRDVFEKIGVEFDYFVRTSREGHKTAVAEMEQRIFDKGLIVKKQYT 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + ++ +  DGQ        V+  +E  YF ++  +++KLL + + +P+
Sbjct: 124 GTYCKGCEEFKKESDLTE--DGQCPLHPTIKVEQTDETNYFLKMEPFREKLLKHIDENPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSR-KT-FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   +NE+   +   L+DL +SR KT    G+ +P DP ++ YVW DAL NYLT  G
Sbjct: 182 FIQPEPFKNELKKMLAEPLEDLCISRPKTRVTLGVDLPFDPDFVTYVWFDALANYLTNIG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGEK 302
           +   PD     +W    H+IGKDIL+ H +YWP  L++A+LPLPKK+  H  ++   G K
Sbjct: 242 W---PDDGYQDWWAECEHMIGKDILKPHGVYWPLMLMAADLPLPKKLSVHSHWVGAGGVK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DPIEV++++GVDALR++L R +    D     D + +  N++L N IGNL+
Sbjct: 299 MSKSIGNVVDPIEVMDKLGVDALRWYLARHMRADSDSQISVDLITQAYNSELGNKIGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR      K++DG +P PGA T  DE++        +     +  Q I  A  Q++    
Sbjct: 359 SRVAKFSNKNFDGKVPMPGALTAEDEALRRTVVEATKAFAGWINLQDIPAATQQIVEAAV 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++ Y D Q PW L K     +R +TVLYVT++  R L   L   +P  A +   +L   
Sbjct: 419 AMNEYIDQQAPWSLFKNEETRERCATVLYVTLDCQRILFEALTQVIPGSATRALGMLNAP 478

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                +     +L  G  L +  D +FPR
Sbjct: 479 KAATPWAPELDKLAGGTELGE-IDALFPR 506


>gi|332018089|gb|EGI58703.1| Methionyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 547

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 182/502 (36%), Positives = 269/502 (53%), Gaps = 32/502 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NA PHIGH Y  ++AD + R++ + G    FTTGTDEHG KI  AA  AGV
Sbjct: 22  YITTPIFYVNAGPHIGHLYSAVLADAIVRYNNMLGHQTFFTTGTDEHGNKIKAAAATAGV 81

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  + S+ FR+M D  ++ Y  FIRTTEK+H D     WK++ ++G IY G YSGW
Sbjct: 82  PNLEYCTRISQQFREMCDKFEVDYSRFIRTTEKQHCDAVYHFWKQLEERGHIYLGKYSGW 141

Query: 128 YSLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y + DEA+  D E+ +  D      +      N V+W EEE Y FRLSA+Q+  L Y+  
Sbjct: 142 YCVSDEAFLCDTELVEQRDSTGKVIKVSAESGNIVEWTEEENYKFRLSAFQND-LKYWLK 200

Query: 183 HPEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNY 238
               + P      +  ++  G  L+DLS++  R    W I  P D  + +YVW+DAL NY
Sbjct: 201 DENTVRPALYHKTLSQWIDEGTCLQDLSITRIRNKMPWAIPSPCDESHSIYVWLDALINY 260

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY   P+ S  + WP  + +IGKDIL+FH IYWPAFL++  L  PK +  H     
Sbjct: 261 LTVLGY---PNESYKELWPPTIQIIGKDILKFHGIYWPAFLIAIGLEPPKTLLCHAHWTV 317

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI P E   +   + LRYF++RE     D  Y    +   +N++LA+ +
Sbjct: 318 DHRKMSKSKGNVISPFEAANDYSEEGLRYFILREAVPQNDANYSPIKIINTLNSELADTL 377

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF---------TESDESILSVCSRVLQEIRENMQNQL 409
           GNLV+R V   +       P P  +          E+ ES+ SV  +     RE+ +   
Sbjct: 378 GNLVNRCVGKAINP-SKEFPNPARYWNVLQSQVADETRESLKSVGRKA----RESYEEYN 432

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD---RASTVLYVTVEVIRQLAILLQA 464
           +H  +  V++++   ++     +PW+L+K   N D       V+ + +E  R  A++L  
Sbjct: 433 LHHVVDAVMNMLHCANKMVAHHEPWQLRKQVDNADSIEELKAVISLALESSRIGALILYP 492

Query: 465 FVPKLANKIFDILFVADENRCF 486
            +P+L++ + D L +  ENR +
Sbjct: 493 IIPRLSSSLLDFLNIPKENRTW 514


>gi|195064774|ref|XP_001996635.1| GH19679 [Drosophila grimshawi]
 gi|193892767|gb|EDV91633.1| GH19679 [Drosophila grimshawi]
          Length = 578

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 175/510 (34%), Positives = 269/510 (52%), Gaps = 29/510 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL      V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPTTTVRLCTGTDEHGTKIQQAAAGH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + D+ S  +RD+     I++DDFIRTTE+RH       W ++  +G IY   YS
Sbjct: 81  KVPVDQYCDEISARYRDVFKAASIAHDDFIRTTEQRHKQAVAHFWHRLKSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++   + +  +Y     +PV+W EE  Y FRLS +QD +  + +  
Sbjct: 141 GWYCVSDETFLTDSQLRLDESSGTRYSLESGHPVEWTEETNYMFRLSNFQDDVRHWVKQE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              + P +    ++  +   L D+S+SR      W I +P+D    +YVW+DAL NYL++
Sbjct: 201 AR-VRPAKFEKILLDTLSEPLPDVSVSRPANRVHWAIPVPNDDSQTVYVWLDALINYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+     +WP    +IGKDIL+FH IYWPAFLL+A L  P++++ H      G+
Sbjct: 260 LGY---PNEEYLAYWPPAQQIIGKDILKFHGIYWPAFLLAAGLSPPQQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+   ++  ++ LRYFL+RE     DG +      + +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPVLAAKQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYD-----------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           +SR+ +  L  +             ++    A     E++L +  R  Q    N      
Sbjct: 377 LSRACAKTLNPHQVYPASHVEHLPQLLQDLDAAKRLQEALLQLAGRCEQHYECNH----F 432

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKT--NPD--RASTVLYVTVEVIRQLAILLQAFV 466
           H     VI+ +   + +F+  KPWELK     PD  R  T++ +T++ +R   I+LQ  +
Sbjct: 433 HLVADTVIATLHAANNFFECAKPWELKANGKTPDAQRLQTIIAMTMDALRLCGIVLQPMM 492

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPG 496
           P+L +++ D L V    R +  L+     G
Sbjct: 493 PQLTSRLLDKLNVPSSERSWHHLNASFATG 522


>gi|195501663|ref|XP_002097889.1| GE10041 [Drosophila yakuba]
 gi|194183990|gb|EDW97601.1| GE10041 [Drosophila yakuba]
          Length = 579

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 181/507 (35%), Positives = 274/507 (54%), Gaps = 33/507 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    + D  S+ +R++     I  +DFIRTTE RH       W+++  +G IY   YS
Sbjct: 81  GIPVAKYCDDISQRYREVFRSAGIQPEDFIRTTEDRHKRAVASFWRRLHTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + +  
Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +PDD    +YVW+DAL NYL++
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   PD   +  WP    VIGKDIL+FH IYWPAFLL+A+L  P++++ H      G+
Sbjct: 260 VGY---PDEEFSAHWPPAQQVIGKDILKFHGIYWPAFLLAADLEPPRQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++   +  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAARQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408
           +SR+ +  L    G I P+  A   +D            +S+L +  R       N    
Sbjct: 377 LSRASAKSLN--PGQIYPSASAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464
             H      ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ 
Sbjct: 432 -FHLVADTAMATLHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQP 490

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ 491
            +P+LAN++ D L V    R +  L +
Sbjct: 491 IIPQLANRLLDKLSVPTAQRGWHYLAE 517


>gi|218883858|ref|YP_002428240.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765474|gb|ACL10873.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 498

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 189/481 (39%), Positives = 279/481 (58%), Gaps = 19/481 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I YPNA PHIGHAY  + ADVLARFHRL G  V F TG DEHG KI + A+ AG  
Sbjct: 1   MTTPIYYPNAPPHIGHAYTTVFADVLARFHRLTGGKVFFLTGNDEHGLKIQRVAEKAGKH 60

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K +VD+ +  +R+   +L+ISYD FIRTT+  H    +  +  I  KG IYK  YSG Y
Sbjct: 61  PKEYVDEMANLYREYWRILNISYDYFIRTTDPYHEKAVKEAFNYIYGKGLIYKAKYSGMY 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  E YY+  E Y   +G+ Y   HN P++++EEE Y+F+LS ++D LL   E+  + +
Sbjct: 121 CVDCEKYYSPGE-YTEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLDVLENQ-DIV 178

Query: 188 LPIERRNEVISFVKS-GLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            P +   EV S +++ GL+D+S++R  +   WGI +P D +Y++YVW DAL NYL+  GY
Sbjct: 179 YPSQYAREVASKIRNEGLRDVSVARPVERVWWGIPVPFDDKYVIYVWFDALMNYLSGIGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+ + +   +W    H+IGKDIL FH   W + L + ++P P++V  H +++ KG KIS
Sbjct: 239 PDDKEKNTL-YWSNVHHIIGKDILWFHTAVWFSMLKALDMPPPRRVIVHSYLISKGLKIS 297

Query: 305 KSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           KS+GNVI   E++E   G D +RY L R     KD     + L    N +LA+  GNLV 
Sbjct: 298 KSIGNVISIEELVERYNGSDGVRYLLSRIFNTDKDSEVSFELLDSIYNTELADTFGNLVR 357

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  S+ LK   G +     +  S DE++  V S  +    + M++  + +AL  V+++  
Sbjct: 358 RVGSLALKKMGGKV-----YKRSIDENVADVISSGIGAYLDAMRSYEVSKALEHVMNIAR 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             ++Y +  KPWE  K+NP +    LY  +E+I+   ILL  F P  ++K+        E
Sbjct: 413 YANQYINETKPWE--KSNPSKE---LYTLLELIKVATILLHPFTPMASSKLASAFGFEIE 467

Query: 483 N 483
           N
Sbjct: 468 N 468


>gi|30425166|ref|NP_780648.1| methionyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|85681906|sp|Q499X9|SYMM_MOUSE RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|26340914|dbj|BAC34119.1| unnamed protein product [Mus musculus]
 gi|124376036|gb|AAI32344.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|148667613|gb|EDL00030.1| methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|187953681|gb|AAI37740.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 586

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 184/512 (35%), Positives = 267/512 (52%), Gaps = 32/512 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 37  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 97  ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G          +PV W +EE Y F+LS +++ L 
Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 217 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   PD     +WPA  H+IGKDIL+FHAIYWPA LL A L  P +++ H  
Sbjct: 277 VNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRIYVHSH 333

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--------------PGAFTESDESILSVCSRVLQEI 401
           + +G L++R  +  +    G  P+              P    ++++  L      L ++
Sbjct: 394 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKL 452

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
                N   I++AL  V S V + + +     PW+L   +P+ A    TVL+V +E +R 
Sbjct: 453 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRV 512

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P LA+K+   L V+   R    L
Sbjct: 513 FGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 544


>gi|260948078|ref|XP_002618336.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720]
 gi|238848208|gb|EEQ37672.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720]
          Length = 569

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 190/529 (35%), Positives = 283/529 (53%), Gaps = 54/529 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60
           K    +Y++T I Y NA+PH+GH Y M++ D   R+  L  G   +F TGTDEHG KI  
Sbjct: 17  KSNGTVYVTTPIFYVNARPHLGHLYSMLLGDTRVRWENLKPGQKTMFLTGTDEHGLKIQA 76

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  MA+ +++ YD FIRTT+  H       W    +KG IY
Sbjct: 77  VAEKEGIDPKVLVDRVSQNFVQMAEAVNVKYDRFIRTTDNDHVKAVEHFWNAAMEKGLIY 136

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAYQD 174
           KG +SGWYS+ DEA+Y   +V    D +    +       N V + EEE YFFRLSA++D
Sbjct: 137 KGSHSGWYSVSDEAFYPPSQVEDIIDAKTGQPKKVSIETRNEVVFQEEENYFFRLSAFKD 196

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKS-GLKDLSLSRKTF--DWGIKIPDDPQYIMYVW 231
           KL+ + E +P F+ P  + +E+++ ++   L DLS+SR ++   WGI +P+D    +YVW
Sbjct: 197 KLIDFLEKNPSFVQPSRKYHELLTELRQEELSDLSVSRPSWRLKWGITVPNDDSQKIYVW 256

Query: 232 IDALTNYLTTTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            DAL NYLT  GY   D P       WP  +H++GKDI+RFH IYWP FL++A + LPK+
Sbjct: 257 FDALINYLTAAGYPQQDMP------IWPP-IHIVGKDIMRFHCIYWPIFLMAAGIELPKQ 309

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           V  H   L  G K+SKSLGNV++PIE+ +    + LR +L+ +   G D  + +  L   
Sbjct: 310 VIVHSHWLCDGFKMSKSLGNVVEPIELAQYYDPEPLRIYLMEQSNLGTDCNFSEAALHNH 369

Query: 350 VNADLANGIGNLVSR------SVSMILKDY--------------DGMIPTPGAFTESDES 389
             + L N   N+VSR       V   ++D+              D ++  P     + +S
Sbjct: 370 -RSKLINKWANIVSRIGGDKFDVEQSVQDFFDGKYSDITEMIKRDAVVEAPDQVLLARDS 428

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW----ELKKTNPDRAS 445
           ++S  S +  E+  +MQ     +AL +    V   + +F   +PW    +L +T    A 
Sbjct: 429 LVSSISSLFSEMDSSMQEFGQMKALHRWWETVELANVFFQTAQPWVYSKKLTQTQDADAD 488

Query: 446 TV----------LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            V          +++T E +R   I +  F+PK A+ + D L V DE R
Sbjct: 489 AVAEQTTLMNYIIFLTAEAVRLSTICVLPFMPKTASGLLDRLGVPDETR 537


>gi|157413361|ref|YP_001484227.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157387936|gb|ABV50641.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 514

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 179/457 (39%), Positives = 254/457 (55%), Gaps = 18/457 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   G+ 
Sbjct: 5   ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVMFITGVDEHGLKIQRTANEKGIE 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D  S  F +     +IS+D FIRT+ K H       +K++    DIY G   GWY
Sbjct: 65  PKSHCDAISEVFNNNWKDWNISFDKFIRTSSKNHELIVNEFYKRVKASDDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  E + ++ E        Y    H   ++W  EE  FFRLS YQ K +    + P FI
Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT------T 241
            PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++      T
Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDAT 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
              L N   S  K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+
Sbjct: 240 EHSLKN---SINKGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQ 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL
Sbjct: 297 KMGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K +D  +P     T  +  + +     ++    N  N  +  A  +V+SL 
Sbjct: 357 LNRTSSMSRKWFDNKVPN-NEKTLIENKLENFAKIAVENYIYNFDNYKLDLAANEVLSLA 415

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456
              + Y +  +PW L  +K N      ++Y  +E  R
Sbjct: 416 INTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTR 452


>gi|158291055|ref|XP_312573.4| AGAP002383-PA [Anopheles gambiae str. PEST]
 gi|157018191|gb|EAA07531.4| AGAP002383-PA [Anopheles gambiae str. PEST]
          Length = 563

 Score =  319 bits (818), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 180/501 (35%), Positives = 276/501 (55%), Gaps = 23/501 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKAAQ 63
           +++T I Y NA PHIGH Y  +IAD + RF+++    +  D   +TGTDEHG KI +AA 
Sbjct: 19  FVTTPIFYVNAAPHIGHLYSSVIADAIHRFNQITRPAESGDCFLSTGTDEHGLKIQQAAI 78

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               +T+ + D  S  +R++ D   I Y  FIRTT+  H    +  W+ ++    IY   
Sbjct: 79  KHSTSTEDYCDAISTKYRELFDRFQIDYSRFIRTTDTDHRQAVQAFWRSLAASDSIYSAS 138

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           YSGWY + DE +  D ++ +   G+ Y+ +  +PV+W EEE Y FRLS YQD +  + + 
Sbjct: 139 YSGWYCVPDETFLTDSQLKENERGEKYSLESGHPVEWTEEENYMFRLSRYQDDVRHWVKG 198

Query: 183 -HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                I P +    ++ +++  L D+S+SR      WG+ +P DP   +YVW+DAL NYL
Sbjct: 199 LEGRRIQPDKFGRILLDWLEEPLPDISISRPMNRVSWGVPVPSDPSQSVYVWLDALVNYL 258

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P  S    WP  + V+GKDIL+FH IYWPAFLL+A +  P+++  H      
Sbjct: 259 TVAGY---PKESFRTRWPPTVQVLGKDILKFHGIYWPAFLLAAQIEPPRQLLVHSHWTVD 315

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS  NV+DP E  E    + LRYFL+RE     DG Y    + + +N++LA+ +G
Sbjct: 316 NQKMSKSKQNVVDPNERAELYTYEGLRYFLLREGVAHSDGNYSDTKVLRILNSELADTLG 375

Query: 360 NLVSRSVSMILKDYDGMIPTP-----GAFTESDES--ILSVCSRVLQEIRENMQNQLIHR 412
           NL+SR     L + + + P       GA  E D +  +L     +  +   + +N   + 
Sbjct: 376 NLLSRCCGKAL-NAESIFPAVDREALGALKEIDATKRMLEALEEMPDKASSHYKNYNFYL 434

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NP-DRA--STVLYVTVEVIRQLAILLQAFVPK 468
            +  ++ L+   + +F+   PW+LKK+ NP DRA  +T+L VT+EV+RQ  I  Q  VP 
Sbjct: 435 VVDTIVHLLHTANNFFETTAPWKLKKSDNPADRAKLNTILSVTMEVLRQAGIAAQPIVPG 494

Query: 469 LANKIFDILFVADENRCFQSL 489
           L+ ++ D L +    R +  L
Sbjct: 495 LSKQLLDKLQIVPTARRWNDL 515


>gi|26335385|dbj|BAC31393.1| unnamed protein product [Mus musculus]
          Length = 587

 Score =  319 bits (818), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 184/512 (35%), Positives = 267/512 (52%), Gaps = 32/512 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 38  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 98  ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 157

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G          +PV W +EE Y F+LS +++ L 
Sbjct: 158 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 217

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 218 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 277

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   PD     +WPA  H+IGKDIL+FHAIYWPA LL A L  P +++ H  
Sbjct: 278 VNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRIYVHSH 334

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 335 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 394

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--------------PGAFTESDESILSVCSRVLQEI 401
           + +G L++R  +  +    G  P+              P    ++++  L      L ++
Sbjct: 395 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKL 453

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
                N   I++AL  V S V + + +     PW+L   +P+ A    TVL+V +E +R 
Sbjct: 454 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRV 513

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P LA+K+   L V+   R    L
Sbjct: 514 FGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 545


>gi|307207156|gb|EFN84946.1| Methionyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 566

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 183/497 (36%), Positives = 273/497 (54%), Gaps = 24/497 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y NA PHIGH Y  ++AD +AR+H + G      TGTDEHG KI  AA  AG+ 
Sbjct: 43  ITTPIFYVNAGPHIGHLYSAVLADAIARYHAMLGHRTFLITGTDEHGNKIKAAAAAAGLP 102

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              +  + S+ FR++ D  ++ Y  FIRTTEK+H D     WK++ ++G IY G Y+GWY
Sbjct: 103 NLEYCTKVSQQFRELCDRFEVDYSRFIRTTEKQHCDAVHHFWKRLEERGHIYLGKYAGWY 162

Query: 129 SLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            + DEA+ +D E+ +  D      +      N V+W EEE Y FRLSA QD  L Y+   
Sbjct: 163 CVSDEAFLSDAELVEQKDSTGETIKVSAESGNTVEWTEEENYKFRLSALQDD-LKYWLKD 221

Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
              + P      +  +V+ G  L+DLS+S  R    W +  P +  + +YVW+DAL NYL
Sbjct: 222 ENTVRPALYHKILSEWVEEGTCLRDLSISRTRNKVPWAMLSPCNESHSIYVWMDALVNYL 281

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P+ S  +FWP  + VIGKDIL+FH +YWPAFL++A L  PK +  H   +  
Sbjct: 282 TALGY---PNESFKEFWPPAVQVIGKDILKFHGVYWPAFLIAAGLEPPKTLLCHAHWIVD 338

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNVI P E   +   D LRYF++RE     D  Y    +   +N++LA+ +G
Sbjct: 339 HQKMSKSKGNVISPFEAANDYSEDGLRYFILREAVPQNDTNYSSTKITNVLNSELADTLG 398

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEI----RENMQNQLIHRAL 414
           NLVSR     + +     P P  +    +S ++  +R  LQ +    R++ +   +H  +
Sbjct: 399 NLVSRCAGKTV-NPSREFPDPAKYWNVLQSEVANETREALQSLGEKTRKSYEEYNLHHVV 457

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKL 469
             V+S +   ++     +PW L+K   D  S      V+ + +E  R  A++LQ  VP+L
Sbjct: 458 DAVMSALHSANKMVAHHEPWHLRKRVDDTDSMRELKAVISLALESSRIAALILQPIVPRL 517

Query: 470 ANKIFDILFVADENRCF 486
           ++ + D L ++ ENR +
Sbjct: 518 SSSLLDFLNISKENRTW 534


>gi|302798545|ref|XP_002981032.1| hypothetical protein SELMODRAFT_154280 [Selaginella moellendorffii]
 gi|300151086|gb|EFJ17733.1| hypothetical protein SELMODRAFT_154280 [Selaginella moellendorffii]
          Length = 496

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 182/498 (36%), Positives = 262/498 (52%), Gaps = 14/498 (2%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +G AY  I AD  ARF RL G +V+F TGTDEHG+KIA AA   G   K   D  +  + 
Sbjct: 1   MGSAYPTIAADAFARFQRLQGRNVVFVTGTDEHGEKIATAAAAKGRKPKEHCDLIANEYA 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +   L+ISYD FIRTT++ H       +K++ DK DIY   Y G Y +  E Y +  ++
Sbjct: 61  SLWKDLNISYDKFIRTTDEAHERAVEQFYKRVYDKEDIYCANYEGLYCVNCEEYKDAKDL 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +         P    +E+ YFF LS YQ +L     + P F+ P  R NEV+ +VK
Sbjct: 121 I---EEHCCPIHRKPCVERKEKNYFFALSKYQSRLEELLSTRPAFVRPPFRMNEVLGWVK 177

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD 259
            GL D S+SR+  +WGI +P D +  +YVW DAL  Y++    G    P+ + A  WPA 
Sbjct: 178 EGLHDFSISREAVEWGIPVPTDKKQTIYVWFDALLGYISALLDGKEVTPENAAASGWPAS 237

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H+IGKDILRFHA+YWPA L SA   +P+ VF HGF+   G K+ KSLGN I+P E++  
Sbjct: 238 VHIIGKDILRFHAVYWPAMLWSAGFAIPETVFGHGFLTKDGLKMGKSLGNTIEPQELVSR 297

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            GVD++RYF + E+  G+DG Y ++     VNA LAN IGNL++R++ ++ K+    I  
Sbjct: 298 FGVDSVRYFFLNEMEFGRDGDYSEERFITIVNAHLANTIGNLLNRTLGLLKKNCASTISV 357

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                  +  +       +   +          A   ++SL +  + Y + + PW   K 
Sbjct: 358 DSESIPEENPVRVFAEAAVARAKRRYSELHFSSACEALLSLANTGNAYLEERAPWTGFKQ 417

Query: 440 NPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--- 492
               A+      L V +E +R L++ L   VP L  +++  L   DE+    S D     
Sbjct: 418 KATPAAEAAAKDLAVILESVRILSVALSPVVPDLCKRMWLQLGYQDEHFNQISWDDTRWG 477

Query: 493 -LKPGFMLHKTFDPIFPR 509
            LK G  L  T  P+FP+
Sbjct: 478 GLKAG-QLVATPSPVFPK 494


>gi|212645096|ref|NP_001129797.1| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
 gi|193247911|emb|CAQ76500.1| C. elegans protein Y105E8A.20b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 524

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/500 (36%), Positives = 280/500 (56%), Gaps = 24/500 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKA 61
           +   ++++ I Y NA+PHIGHAY  ++ DV  R++RL   G    F+ GTDEHG KI +A
Sbjct: 10  KSSTFVTSPIFYANAEPHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQA 69

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A  T K F D+ S  F D+   L++S+ +FIRTT+  H +  +  W KI D G IYK
Sbjct: 70  ALAAKSTPKQFCDRVSSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYK 129

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
             YSG+YS+ DE +  +++V K     GA+     +   PV+W+EEE Y FRLS +++K+
Sbjct: 130 STYSGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKV 189

Query: 177 LSYYESHPEFILPIERRN-EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
             +       + P + ++  + S   S    +S SR    WGI +P+DP   +YVW+DAL
Sbjct: 190 AEWINRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDAL 249

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT TG+   P+      WP    VIGKDI +FH  YWPAFL++A L LP+KVF HG 
Sbjct: 250 VNYLTVTGF---PNAQSV--WPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGH 304

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            L    K+SKSLGNV++P E I +   + LRYFL++      D  ++ +   + +N+DL 
Sbjct: 305 WLIDNVKMSKSLGNVVNPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSCLQTINSDLV 364

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL------ 409
           N +GNL++RS    + + +GM P      + +  I     ++++ + E+ +N +      
Sbjct: 365 NNVGNLLNRSTVEKI-NKEGMYPK-MEIEDIEAEIRENAKKLMEMVEESRENCVDLYDEM 422

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              + +  ++  + E +R F + +PW  K+ +  R  ++L+VT + IR + ILLQ   PK
Sbjct: 423 SYFKIIENLMLTMKEANRLFQSSQPW--KEIDEKRLKSLLFVTYDTIRVVTILLQPITPK 480

Query: 469 LANKIFDILFVADENRCFQS 488
           +A    + L V    R  ++
Sbjct: 481 MAEFCLNRLGVPKNERNLEN 500


>gi|189193705|ref|XP_001933191.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978755|gb|EDU45381.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 518

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/486 (37%), Positives = 261/486 (53%), Gaps = 27/486 (5%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ DV+ R+H L G   L  TGTDEHG K+ +AA  AG+  K F D+ +  F+++A   
Sbjct: 1   MVLTDVVKRWHLLKGEKALLCTGTDEHGLKVQRAAAKAGIDPKSFCDKGAEIFKELARKA 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY----- 142
           +I+ D F+RTT+  H +  +  W  + +KG IY+  + GWYS+ DE +Y    V      
Sbjct: 61  EITNDHFVRTTDGEHKEAVQYAWFLLQEKGLIYEQKHEGWYSVTDECFYPKSGVQPYLDP 120

Query: 143 -KGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
             G     Y         + V+W  EE Y FRLSA++DKLL +Y+++PE+I+P  R N+V
Sbjct: 121 PTGRKIMVYRLHTSIETGSEVEWSSEENYHFRLSAFRDKLLEFYKNNPEWIVPEARMNDV 180

Query: 197 ISFVKSGLKDLSLSRKTFD---WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           +  V+SGL+DLS+SR  FD   WGI++P D    +YVW+DAL NY T  GY   P   + 
Sbjct: 181 VQAVESGLEDLSISR-PFDRLTWGIRVPGDDSQTIYVWLDALMNYATKAGYPWTPGREQE 239

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD HVIGKDI+RFH IYWPAFL++  LPLPKK+ +H      G K+SKS G V+DP
Sbjct: 240 GGWPADCHVIGKDIVRFHCIYWPAFLMALGLPLPKKILTHAHWTLGGSKMSKSTGKVVDP 299

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              I+  G D +R+++VRE     D  YD   +  + N  L   +GNL SR V       
Sbjct: 300 FLAIDRFGSDVMRFYMVREGGIRDDASYDNARIIMQYNKFLRQHLGNLASRVVRGKKWSV 359

Query: 374 DGMIPTPGAFT--ESDESILS-----VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            G I   G  +  E +E   S       + +  E           RA+  +   +   + 
Sbjct: 360 RGAIERIGGRSAEEWEEGPGSRFRNNSLATIASETDAAFDAYDPRRAVFGITEFIRSTNA 419

Query: 427 YFDAQKPW----ELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +F    PW    +     P +    ++Y++ E +R   ILLQ ++P  AN++ D L V  
Sbjct: 420 FFTMSSPWDKILDFGPGEPGEDVDKIIYLSAEALRIAGILLQPYMPNKANQLLDQLGVDR 479

Query: 482 ENRCFQ 487
           + R F+
Sbjct: 480 DRRTFE 485


>gi|170029048|ref|XP_001842406.1| methionine-tRNA synthetase [Culex quinquefasciatus]
 gi|167879456|gb|EDS42839.1| methionine-tRNA synthetase [Culex quinquefasciatus]
          Length = 553

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 175/499 (35%), Positives = 276/499 (55%), Gaps = 24/499 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL------DVLFTTGTDEHGQKIAKA 61
           +++T I Y NA PHIGH Y  +IAD +   HR +GL        LF+TGTDEHG KI +A
Sbjct: 20  FVTTPIFYVNAAPHIGHLYSAVIADAI---HRFNGLLNDPSGPSLFSTGTDEHGTKIQQA 76

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    V    +  Q S  +R +    ++ Y  FIRTT+  H D  + +WK +   G IY 
Sbjct: 77  AAKHSVPVATYCQQISDQYRSLFRDFNVEYSRFIRTTDDDHADAVQSIWKALEASGSIYS 136

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYY 180
             YSGWY + DE +  D ++ +   G   +    +PV+W EE  + FRL  +Q  +L + 
Sbjct: 137 AQYSGWYCVPDETFLTDSQLKENDQGVKVSVDSGHPVEWTEERNFMFRLERHQADVLHWI 196

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
           +   + ++P + +  ++ F++  L D+S+SR      WGI++P DP   +YVW+DAL NY
Sbjct: 197 KGCEDRVVPGKFQKILLDFLEEPLPDISISRPQARVSWGIEVPGDPTQSVYVWLDALVNY 256

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY   P     + WP  + V+GKDIL+FH IYWPAFL++A L  P+++  H     
Sbjct: 257 LTVAGY---PHPEFGQRWPPTVQVLGKDILKFHGIYWPAFLIAAGLEPPRQLLVHSHWTV 313

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS  NV+DP E       + LR+FL+RE     DG Y    + + +NA+LA+  
Sbjct: 314 DNQKMSKSKLNVVDPNERASLYTHEGLRFFLLREGVAHSDGNYSDTKVMRILNAELADTF 373

Query: 359 GNLVSRSVSMILKDYDGMIPT--PGAFT-----ESDESILSVCSRVLQEIRENMQNQLIH 411
           GNL+SR     L + +G++PT  P  F      E  + +L +   + ++   + +N   +
Sbjct: 374 GNLLSRCCGKAL-NPEGIVPTINPEVFNELGKLEITKKMLDLLHALPEKCLSHYRNFNFY 432

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +  VI ++   + +F+   PW+LK     ++ +T+L +T+EV+RQ  I++Q  VP+L+
Sbjct: 433 LVVDSVIQVLHATNNFFETTAPWKLKAPEQRNQLNTILALTMEVLRQTGIIMQPIVPQLS 492

Query: 471 NKIFDILFVADENRCFQSL 489
            K+ D L V+   R ++ L
Sbjct: 493 GKLLDKLSVSRHRRLWRDL 511


>gi|254568374|ref|XP_002491297.1| Mitochondrial methionyl-tRNA synthetase (MetRS) [Pichia pastoris
           GS115]
 gi|238031094|emb|CAY69017.1| Mitochondrial methionyl-tRNA synthetase (MetRS) [Pichia pastoris
           GS115]
 gi|328352185|emb|CCA38584.1| methionyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 547

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 179/511 (35%), Positives = 282/511 (55%), Gaps = 34/511 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    K +I+T I Y NA PH+GH Y M++ D   R+  L      FTTGTDEHG K+  
Sbjct: 6   LSSASKYFITTPIFYVNAAPHLGHLYSMLLCDFQKRWLDLKETPNYFTTGTDEHGLKVQI 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+      ++F D  S  F+ +A + DI YD FIRTT+  H  T R  W+ +   G IY
Sbjct: 66  AAELNKTDPRLFCDNLSNKFKHLAQISDIQYDRFIRTTDADHLATVRQFWETVWKNGYIY 125

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179
           KG +SGWYS+ DE +Y + +V +  DG+  + +  + V +  EE YFF+LSA+Q +L+  
Sbjct: 126 KGKHSGWYSVSDETFYPESQV-EQRDGKTVSTETGSEVVYESEENYFFKLSAFQSQLIDL 184

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
           Y+++P+F++P    ++++    +  L+DLS+SR +    WGI +P+D    +YVW DAL 
Sbjct: 185 YKANPQFVIPANYYSDLLKELEREPLQDLSISRPSSRLQWGISVPNDESQKIYVWFDALV 244

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT+ GY   P     +FWP   H+IGKDI RFH IYWPAFL++A +  P+KV  HG  
Sbjct: 245 NYLTSIGY---PSSRYKEFWPG-THLIGKDISRFHCIYWPAFLMAAKVSPPEKVVVHGHW 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV DP+ + +  GVD+LR FL        D  + +  L    +    +
Sbjct: 301 LMGGSKMSKSKGNVADPLAIGDYYGVDSLRLFLGANSILSNDCDFTERKLNDHRDL-FID 359

Query: 357 GIGNLVSRSVS-----------------------MILKDYDGMIPTPGAFTESDESILSV 393
            I N+V+R +S                       ++ + ++G +       +S + I+  
Sbjct: 360 KICNVVTRCISKSFDPARSVMSFSNEDMNLVWKRILERGWEGDLEKAAELKKSYDEIVDD 419

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++  +I   M     H+++ ++  L+ +V+++ ++ +PW L K+N       ++V ++
Sbjct: 420 AQQLFSKIDVLMSTFTTHKSVGEIFDLMLKVNQFVNSTEPWNL-KSNERLQDLSIFVALD 478

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENR 484
           V R   ILLQ F+P L+NK+ D++ V    R
Sbjct: 479 VTRVCLILLQPFIPGLSNKLLDMIKVESSKR 509


>gi|118089314|ref|XP_426247.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 572

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 179/512 (34%), Positives = 269/512 (52%), Gaps = 33/512 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQN 64
           +L +ST I Y N  PHIGH Y  ++AD L R   L G      +TGTDEHG KI +AA  
Sbjct: 24  RLLLSTPIFYANGPPHIGHVYSALLADALHRHRGLRGAGPSRLSTGTDEHGLKIQQAAAA 83

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG +      + S  F        +S+ DFIRT+E RH       W  + ++G +YKG Y
Sbjct: 84  AGTSPPELCARISALFHQAFTQAAVSFTDFIRTSEPRHCQAVCHFWTALQERGALYKGTY 143

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSY 179
            GWY   +E +  + ++ +  D Q    +      + V W +EE Y F+LSA+QD L  +
Sbjct: 144 EGWYCTAEEGFLPESQLTERVDAQGCTHKVSVESGHEVHWTKEENYMFKLSAFQDPLQKW 203

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
              +P  I P      V+ ++   L DLS+SR+     WGI +P D    +YVW+DAL N
Sbjct: 204 LRDNPRAICPEPFYQRVLCWLGEDLPDLSISRERSRLQWGIPVPSDSTQTIYVWVDALVN 263

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YL+  GY +    +  ++WPA  HV+GKDIL+FHA+YWPA L++A L  P+++F H    
Sbjct: 264 YLSVLGYPE----THGEWWPAAHHVVGKDILKFHAVYWPALLMAAGLSPPERIFVHSHWT 319

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+K+SKSLGNVIDP    E   VD  RYFL+R+    +D  Y  + + K VN++L + 
Sbjct: 320 VRGQKMSKSLGNVIDPFACNERYTVDGFRYFLLRQGVPERDCDYYDEKVVKVVNSELVDA 379

Query: 358 IGNLVSRSVSMILK-----------------DYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +G L++RS +  +                  DY        A  E  E ++SV S  L+ 
Sbjct: 380 LGGLLNRSTAPGINPSNTYPCFSETCFPKVVDYRETEALGRAAAEDYEFVVSVASLPLR- 438

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           +    ++  I++AL  +   V + + +F   +PW+L + +P       T+++VT+E +R 
Sbjct: 439 VASYFEDFQIYKALECIALCVRQTNGFFQRHRPWKLDRKDPSEKLWLDTIIHVTLECLRV 498

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ  +P  A+K+   L V  E R   +L
Sbjct: 499 YGTLLQPVIPHTADKLLSRLAVEPEERLISNL 530


>gi|123968528|ref|YP_001009386.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123198638|gb|ABM70279.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 514

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 175/455 (38%), Positives = 256/455 (56%), Gaps = 14/455 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  II D +AR+ RL G +V+F TG DEHG KI + A   G+ 
Sbjct: 5   ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANEKGIP 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D+ S  F +     +IS+D FIRT+ K H       ++++    DIY G   GWY
Sbjct: 65  PKSHCDEISEIFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  E + ++ E        Y    H   ++W  EE  FFRLS YQ K +    + P FI
Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     D 
Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISS-DA 238

Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            + S  K     WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+K+
Sbjct: 239 TEHSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++++ G D +R++L+++I+ G DG +        +N DLAN IGNL++
Sbjct: 299 GKSLGNVLDPDLLLKKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +D  +P     + S+  + +     ++    N  N  +  A  +V+SL   
Sbjct: 359 RTSSMSRKWFDNKVPNNEKIS-SENKLENYAKIAVENYIYNFDNYKLDLAANEVLSLAIN 417

Query: 424 VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456
            + Y +  +PW L  +K N      ++Y  +E  R
Sbjct: 418 TNLYLNDNQPWVLIKEKDNLPLVKEIIYNVLESTR 452


>gi|71119330|gb|AAH99669.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 586

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 183/512 (35%), Positives = 266/512 (51%), Gaps = 32/512 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 37  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 97  ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G          +PV W +EE Y F+LS +++ L 
Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 217 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   PD     +WPA  H+IGKDI +FHAIYWPA LL A L  P +++ H  
Sbjct: 277 VNYLTVVGY---PDADFKSWWPATSHIIGKDIFKFHAIYWPALLLGAGLRPPHRIYVHSH 333

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--------------PGAFTESDESILSVCSRVLQEI 401
           + +G L++R  +  +    G  P+              P    ++++  L      L ++
Sbjct: 394 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKL 452

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
                N   I++AL  V S V + + +     PW+L   +P+ A    TVL+V +E +R 
Sbjct: 453 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRV 512

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P LA+K+   L V+   R    L
Sbjct: 513 FGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 544


>gi|326924254|ref|XP_003208345.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 569

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/511 (35%), Positives = 270/511 (52%), Gaps = 33/511 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQNA 65
           L +ST I Y N  PHIGH Y  ++AD L R   L G      +TGTDEHG KI +AA  A
Sbjct: 22  LLLSTPIFYANGPPHIGHLYSALLADALHRQRGLRGAGPSRLSTGTDEHGLKIQQAAAAA 81

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G +      + S  F        +S+ DFIRT+E RH       W  + ++G +YKG Y 
Sbjct: 82  GTSPPELCARISALFHQAFTQAAVSFTDFIRTSEPRHCQAVCHFWAALQERGALYKGTYE 141

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           GWY   +E +  + ++ +  D Q +  +      + V W +EE Y F+LSA+QD L  + 
Sbjct: 142 GWYCTAEEGFLPESQLTERVDAQGFTHKVSAESGHEVHWTKEENYMFKLSAFQDPLQKWL 201

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +P  I P      V+ ++   L DLS+SR+     WGI +P D    +YVW+DAL NY
Sbjct: 202 RDNPRAISPEPFYQRVLCWLGEDLPDLSISRERSRLQWGIPVPSDSTQTIYVWVDALVNY 261

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L+  GY +   G    +WPA  HV+GKDIL+FHA+YWPA L++A L  P+++F H     
Sbjct: 262 LSVLGYPETHGG----WWPAAHHVVGKDILKFHAVYWPALLMAAGLSPPERIFVHSHWTV 317

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G+K+SKSLGNVIDP    E   VD  RYFL+R+    +D  Y  + + K +N++LA+ +
Sbjct: 318 RGQKMSKSLGNVIDPFVCNERYTVDGFRYFLLRQGVPERDCDYYDEKVVKVLNSELADAL 377

Query: 359 GNLVSRSVSMILK-----------------DYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           G L++RS +  +                  DY        A  E  E +++V S  LQ +
Sbjct: 378 GGLLNRSTAPGINPSNTYPCFSETCFPKVVDYMEAEALGRAAAEDYEFVVAVASLPLQ-V 436

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
               ++  I++AL  +   V + + +F   +PW+L + +P       T+++VT+E +R  
Sbjct: 437 ASYFEDFQIYKALECIALCVRQTNGFFQRHRPWKLDRKDPAEKLWLDTIIHVTLECLRVY 496

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ  +P +A+K+   L V  E R   SL
Sbjct: 497 GTLLQPVIPHIADKLLSRLAVEAEERKISSL 527


>gi|150863806|ref|XP_001382407.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
 gi|149385062|gb|ABN64378.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
          Length = 584

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/528 (35%), Positives = 284/528 (53%), Gaps = 52/528 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAKAAQNA 65
            Y+ST I Y NA PH+GH Y M++AD   R+ +LD      F TGTDEHG KI  AA+ +
Sbjct: 25  FYVSTPIFYVNASPHLGHLYSMLLADTRTRWEKLDPKKSAYFLTGTDEHGLKIQTAAEKS 84

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ K  VD  S+NF+ +A+  ++ YD FIRTT+  H +  +  W  + +KG I++G +S
Sbjct: 85  GLSPKQLVDSVSQNFKVLAEKFNVDYDRFIRTTDTDHTEVVQFFWNMMMEKGFIHEGSHS 144

Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           GWYS+ DE +Y + ++ +     G      +   + V + EEE YFF+LS +QD+L+S+ 
Sbjct: 145 GWYSVSDETFYPETQIEEVVDENGTKKMVSSESRSEVVFQEEENYFFKLSDFQDQLISFL 204

Query: 181 ESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
           E +P+FILP  R  ++++ +K   L DLS+SR +    W I++P+DP+  +YVW DAL N
Sbjct: 205 EKNPKFILPEHRYTQILNILKEAPLPDLSISRPSSRLKWSIEVPNDPEQKIYVWFDALLN 264

Query: 238 YLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           YLT TGY         +F       WPA  H++GKDI++FH IYWP FLL+A + LPK+V
Sbjct: 265 YLTATGYPQTFPVENNRFVTSPENPWPA-THIVGKDIIKFHTIYWPIFLLAAGIELPKQV 323

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
             H   L  G K+SKSLGNV+DP +++E  G DA+R+FL+       D  Y ++ L +  
Sbjct: 324 IVHAHWLSDGFKMSKSLGNVVDPFDILEYYGEDAVRFFLMENSNIQDDCKYREELLHQTR 383

Query: 351 NADLANGIGNLVSRSVSMI--------------LKDYDGMIPTPGAFTESDESILSVCSR 396
            A +     NL+SR  +                  D D +I       +  +SI+     
Sbjct: 384 EA-IIGKYANLMSRCGNSKFDIRQSVEDWRNGRFSDVDTLINEQALNKDQTQSIIEARDN 442

Query: 397 V---LQEIRENMQNQLI----HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--- 446
           +   L  +  NM ++L      RA+    + V   ++ F   +PW   K   D A +   
Sbjct: 443 LVASLNGLYTNMDSKLADFDHSRAIQNWWTAVYYGNQLFQLSEPWLYTKLLKDTAVSDAD 502

Query: 447 ----------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                      +++  E +R  +IL+   VP+L+ KI D L VA   R
Sbjct: 503 KESYRILQNYFVFLAAETVRITSILITPIVPRLSEKILDRLSVASGAR 550


>gi|71008184|ref|XP_758191.1| hypothetical protein UM02044.1 [Ustilago maydis 521]
 gi|46097863|gb|EAK83096.1| hypothetical protein UM02044.1 [Ustilago maydis 521]
          Length = 634

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 191/534 (35%), Positives = 287/534 (53%), Gaps = 58/534 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFH----------------------RLDGLDV 45
           Y++T I Y NA PHIGH Y  +IAD LAR+H                        D +  
Sbjct: 63  YVTTPIFYVNADPHIGHLYSDVIADALARYHGYMRSGYSTYNHCDGPNPSTNSMTDMVRP 122

Query: 46  LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
           +F+TGTDEHG K+ K A+ A    +   D+ S+ F+ +AD  +ISY  FIRTT+  H   
Sbjct: 123 MFSTGTDEHGLKMQKVAEAASEDPRALCDRISQRFKHLADAANISYTHFIRTTDTDHKVA 182

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWM 160
              LW+ + DKG IY+G + GWY++ DEA+Y + +V    G DG+           V+W 
Sbjct: 183 VEHLWRTLRDKGHIYQGSHEGWYAVSDEAFYPEGQVKTVVGEDGKEVRQSIETGAKVEWS 242

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           +E  Y FRLS +Q  L+ +  ++P+ I P ++  EV++ V++GL DLS+SR +    WGI
Sbjct: 243 QEVNYKFRLSNFQKPLVEWLRANPKAIQPAQKHAEVLAEVEAGLTDLSISRPSSRLSWGI 302

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-----LDNPDGSKA--KFWPADLHVIGKDILRFH 271
           ++P+D ++ +YVW+DALTNYLT  GY         +G+ A    WPAD+HV+GKDI+RFH
Sbjct: 303 RVPEDDEHSIYVWVDALTNYLTAAGYPFAASTGQAEGNVALSSAWPADVHVVGKDIVRFH 362

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           AIYWPA LL+A LPLP+ + +H        K+SKS GNV +P E I+  G+DALR+FL+R
Sbjct: 363 AIYWPAMLLAAGLPLPRTILAHSHWTMNKAKMSKSRGNVANPFEAIDTFGLDALRFFLLR 422

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTES 386
                G D  Y+   L +     L   +GNLVSR     +   L D+     T       
Sbjct: 423 VGGNFGSDSDYNPTVLVEYHRKYLQGQLGNLVSRICAPKIHARLNDFARDAATHVLHRPL 482

Query: 387 DESI--------LSVCSRV---LQEIRENMQNQLIHRALAQVI-----SLVSEVDRYFDA 430
            E +        LS+C+ +   L ++  N+   +    +A+V+     S+++  +     
Sbjct: 483 KEQVELHMDSESLSLCTALETSLTQLPANVDALMSDFEVAKVLELILESVIASTNELIQR 542

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +PW    T+P      + +  E +R  A+LLQ F+P+  + + D L +   +R
Sbjct: 543 LEPWS-ASTHPVVVLETVVLVTESLRISALLLQPFMPQKMSALLDTLKIPQGSR 595


>gi|19115319|ref|NP_594407.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|74675941|sp|O14000|SYMM_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|2388946|emb|CAB11680.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe]
          Length = 539

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 176/507 (34%), Positives = 271/507 (53%), Gaps = 16/507 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAKAAQNAG 66
           +++T I Y NA PH+GH Y +++ D +ARF  L   + V+ +TGTDEHG K+   AQ  G
Sbjct: 22  FLTTPIFYVNAAPHLGHLYSLVLTDAIARFQNLKPDVSVISSTGTDEHGLKVQTVAQTEG 81

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+     D+NS+ F D+A   +  +  FIRTT  +H  + +  WK I   G I    + G
Sbjct: 82  VSPLQLCDRNSKRFADLAVAANTKFTHFIRTTNPKHQASVQEFWKTIQKAGMISFERHEG 141

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WY + DE +Y +  + K  D      +         VQW  E  Y F LS +Q +L+ +Y
Sbjct: 142 WYCVSDETFYPESAIQKVVDPATKQEKRVSMETGKEVQWSSEMNYHFLLSKFQSRLIEHY 201

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +P F+ P     +V+  +K+G+ DLS+SR  +   WGI +P + Q  +YVW+DAL NY
Sbjct: 202 NKNPNFVQPSIFHTQVLEELKTGISDLSISRPKQRLSWGIPVPGNSQQTIYVWLDALINY 261

Query: 239 LTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           ++  GY   N   S +  WPA++HVIGKDI+RFH IYWPAFL++A LPLP+K+  H    
Sbjct: 262 ISVIGYPWLNEKSSLSAGWPANMHVIGKDIIRFHCIYWPAFLMAAGLPLPEKILVHSHWT 321

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSLGNV+DP  +IE+ GVD +RY+L++      D  +D + L+K    DL   
Sbjct: 322 MNKVKMSKSLGNVVDPFWLIEKYGVDTIRYYLLKRGRLTSDSNFDIEELEKDEEHDLRRS 381

Query: 358 IGNLVSRSVS---MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           +G L+SR  S    I  +          FTE  E I+     +     +++    ++  +
Sbjct: 382 LGVLLSRLQSKKLFISNEIQKQWHKKDDFTEY-EDIVHELIELPVVCAQSIDGGCVYEVI 440

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V S++  V + F  ++PW+L   + ++  T++ V    +R   ILLQ  +P  + ++ 
Sbjct: 441 NLVQSVLRRVTKLFQLKEPWKLSDDSQEKIDTLMLV-AHSLRISGILLQPIMPTKSTELL 499

Query: 475 DILFVADENRCFQSLDQRLKPG-FMLH 500
           D L +    R  Q+     +P  F  H
Sbjct: 500 DQLGIPKNQRSLQNATNVFEPTEFTFH 526


>gi|78184713|ref|YP_377148.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169007|gb|ABB26104.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 514

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 184/479 (38%), Positives = 272/479 (56%), Gaps = 19/479 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G AY  +  D LARF RL   DV+F TG DEHGQKI + A+   ++
Sbjct: 5   LTTPLYYVNDKPHLGSAYTTLACDALARFKRLTQGDVVFITGVDEHGQKIQRTAELNNIS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
             V  D+ S  ++D+    +IS D F+RTT  RH       ++++   GDI  G  +GWY
Sbjct: 65  PIVHCDKISERYQDLWSRWNISQDRFVRTTNPRHLQLVEQFYERVKASGDIVTGRQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D +     D Q    Q   ++W +EE  FFRLS YQ + +    ++ +FI 
Sbjct: 125 CVGCEEYKDDPD--DSVDPQCPIHQKT-LEWRDEENLFFRLSRYQ-RDIEELIANDDFIA 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR EV +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT    LD  
Sbjct: 181 PASRRQEVRNFVARGLRDFSISRVNVSWGLPVPGHSGHTFYVWFDALLGYLT--ALLD-- 236

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG            WPA +HVIGKDILRFHA++WPA L+SA LP+PK+VF HGF+  +G+
Sbjct: 237 DGGSVDLERLADCGWPASVHVIGKDILRFHAVFWPAMLISAGLPVPKRVFGHGFLTREGQ 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP  ++E+ G DA+R++L+R+I  G DG + +      VN DLAN IGNL
Sbjct: 297 KMGKSLGNVLDPELLLEKCGADAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ-VISL 420
           ++R+ SM  K +D  +P P          L++ ++   EI  +   +L  ++ ++ ++ L
Sbjct: 357 LNRTSSMARKWFDNSVP-PHTIDSHKNHPLALKAQATVEIVMSSMPELGFKSASEAILQL 415

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               + + +   PW   K   +  S    LYV +E  R + +LL   +P L+++I D L
Sbjct: 416 AIAANGHLNDTAPWSRMKQPGEEHSVANDLYVVLESTRIVGLLLAPLLPDLSSRILDQL 474


>gi|118587914|ref|ZP_01545324.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118439536|gb|EAV46167.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 517

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 172/477 (36%), Positives = 268/477 (56%), Gaps = 10/477 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHA+  ++AD+L R  +  G D++ +TG DEHGQK  +AA+  
Sbjct: 13  KSYITTPIYYVNGSPHIGHAFTSVMADILKRNRQALGYDMMLSTGVDEHGQKNQEAAEKE 72

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ + ++D     FR + D LD++YD F+RT+ + H      + + I DK  I K  Y+
Sbjct: 73  GMSVEDYLDMRCAEFRAVFDRLDVAYDYFVRTSREGHKTAVAGMEQSIFDKDLIVKKNYT 132

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + ++ +  DGQ        V+  EE  YF ++  ++ +LL +   +P+
Sbjct: 133 GTYCKGCEEFKKESDLTE--DGQCPLHPTMKVEQTEETNYFLKMEPFRARLLQHIADNPD 190

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           F+ P   +NE+   +   L+DL +SR       GI++P D +++ YVW DAL NYLT   
Sbjct: 191 FVQPEAFKNELKQMLSEPLEDLCISRPKARVTLGIELPFDTEFVTYVWFDALANYLTNIN 250

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGEK 302
           +   P+     +W    H+IGKDIL+ H +YWP  L++A LPLPKK+  H  ++   G K
Sbjct: 251 W---PEEGYESWWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWVGAGGVK 307

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DPIEVIE++GVDALR++L R +    D     D + +  N +L N IGNL+
Sbjct: 308 MSKSIGNVVDPIEVIEKLGVDALRWYLARHMRADSDSQISVDFITQSYNTELGNKIGNLL 367

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+       +DG +P PG  +  DE+I        + + E +    I   +  +I++  
Sbjct: 368 SRAAKFSKARFDGKLPAPGPLSPEDEAIRKSVLEATKGMGEWINLAEIPARVQSIITVAD 427

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E++ YF  Q PW+L K     +R  TV+YVT++ +R +   L   +P  A K   +L
Sbjct: 428 EMNNYFAEQAPWDLIKNEETRERCQTVIYVTLDSLRIVMEALTQVIPASAGKALAML 484


>gi|297526914|ref|YP_003668938.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255830|gb|ADI32039.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 500

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 184/472 (38%), Positives = 274/472 (58%), Gaps = 17/472 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA PHIGHAY  + ADV+AR+HRL G +V F TG DEHG K+ + A+  G
Sbjct: 5   FYITTPIYYPNAPPHIGHAYTTVFADVMARYHRLVGDEVFFITGNDEHGLKLQRVAEKKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  K FVD+ +  +R    +LDISYD FIRTT++ H  T +   +K+ DKG IYK  Y+G
Sbjct: 65  IHPKQFVDEMADVYRKYWGMLDISYDYFIRTTDEYHEKTVKTAIQKLYDKGLIYKASYAG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WY +  E +Y+  E Y   DG+ Y   H  P++W+EEE Y+F+LS ++D ++   ++  +
Sbjct: 125 WYCVDCEKFYSPGE-YVEIDGKPYCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNK-D 182

Query: 186 FILPIERRNEVISFV-KSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            I P     EV+  V K GL+D+S++R  +   WGI++P D  Y +YVW DAL NY++  
Sbjct: 183 IIYPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISGI 242

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GYL++ D    K+WP   HVIGKDIL FH + W + L + ++ LPKK+  H F++++G K
Sbjct: 243 GYLEDMDRFN-KYWPNVHHVIGKDILWFHTVIWFSILKALDIELPKKLLVHAFLINRGLK 301

Query: 303 ISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           I KS GNVI   ++I      D +RY L+R     KD     +      N++LA+ +GNL
Sbjct: 302 IGKSAGNVIAIEDLINRYQDSDGVRYILMRVFNMDKDVDVSTELFDSIYNSELADTMGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R   +  K   G++       E   SI+      L +  E M+   + RA+  V+ L+
Sbjct: 362 IRRIGVLAKKKLGGIVYKREVNKELSTSIME----TLNKYNEYMKTYDVSRAIQTVMDLL 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + + Y +  +PWE  K +P +    LY  +E +R    +L   +PK A+KI
Sbjct: 418 RKANAYVNMTRPWE--KIDPGKE---LYSLLETVRASTTMLYPIIPKAASKI 464


>gi|58258053|ref|XP_566439.1| methionine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57222576|gb|AAW40620.1| methionine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 582

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 190/497 (38%), Positives = 279/497 (56%), Gaps = 27/497 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQN 64
            Y++T I Y NA PH+GH + +++ DVLARF RL      V+F TGTDEHG KI +AA+ 
Sbjct: 53  FYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTDEHGLKIQQAAKA 112

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + F D  S+ FR +A + + S  DFIRTTE RH       W  +   GDIYKG +
Sbjct: 113 NGVGEQEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKGTH 172

Query: 125 SGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           SGWYS+ DE++Y   +V K   DG+    +  N V W EE  + FRL  ++ K+L  + S
Sbjct: 173 SGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEETNWKFRLGRHK-KVLEKWLS 231

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
            PE + P   R +++  + S L+DLS+SR +    W I +P DP+  +YVW+DAL NY+T
Sbjct: 232 QPESVHPNTVRLDLLRQL-SSLEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     ++  WPAD+HV+GKDI++FHA++WP+ L SA+LP PK++ +H       
Sbjct: 291 VLGYPDWEGKGESVGWPADVHVVGKDIIKFHALHWPSLLHSASLPAPKRIIAHAHWTMSH 350

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD---LANG 357
            K+SKS GNV+DPI  + + G D +R++L+R    G     D D     V      LA+ 
Sbjct: 351 TKMSKSRGNVVDPISAMTQWGEDGVRWYLMR---VGGGLVDDADYNPAEVEVHYRLLADQ 407

Query: 358 IGNLVSR-SVSMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +GNL+SR S + +LK  +     G   T     + DE +  + +R+ +E    M+   + 
Sbjct: 408 VGNLLSRISGAKVLKKAEREFDWGNEKTRDRGEDRDEELDGMMARMREEFEGKMEVFGVS 467

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKL 469
           +A A V+ +V   ++ F +  PW     +P   S+V  +T     +R  AILLQ  +P  
Sbjct: 468 QACAGVMDVVMATNKLFTSLAPW-----SPSTPSSVPALTYAYHALRLSAILLQPIIPAK 522

Query: 470 ANKIFDILFVADENRCF 486
           A +  D L V  E R +
Sbjct: 523 AGEALDRLGVPAEERSW 539


>gi|301769295|ref|XP_002920066.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353829|gb|EFB29413.1| hypothetical protein PANDA_008748 [Ailuropoda melanoleuca]
          Length = 593

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/508 (35%), Positives = 269/508 (52%), Gaps = 32/508 (6%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA +AG
Sbjct: 48  TTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSAAATRFSTGTDEHGLKIQQAAASAG 107

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG Y G
Sbjct: 108 LAPTELCDRVSAQFQQLFREAGISSTDFIRTTEARHRIAVQHFWGLLKARGLLYKGLYEG 167

Query: 127 WYSLRDEAYYNDDEVYKGADGQ----YYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WY   +E +  + +V + +D      Y + +  +PV W +EE Y FRLS +++ L  +  
Sbjct: 168 WYCASEECFLPEAKVTRQSDSSGDSCYVSLESGHPVSWTKEENYIFRLSQFREPLQRWLR 227

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
             P+ I P      V+ +++  L DLS+SRK+    WGI +P D    +YVW+DAL NYL
Sbjct: 228 GDPQAITPEPFLRAVLQWLEEELPDLSVSRKSSHLHWGIPVPGDDSQTIYVWLDALVNYL 287

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P+     +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H      
Sbjct: 288 TVIGY---PNAEFKSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSHWTVC 344

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA+ +G
Sbjct: 345 GQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELADALG 404

Query: 360 NLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQEIREN 404
            L++R  +  +    G  P          PG    S      D ++++  + + +++ ++
Sbjct: 405 GLLNRCTAKRINP-SGTYPVFCTTCFPSEPGLVGPSVRAQAEDYALVNAVATLPRQVADH 463

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAIL 461
             N  I++AL  V S V + + +     PW L   +P  A    TVL+V +E +R    L
Sbjct: 464 YDNFQIYKALEAVSSCVRQTNSFVQRHAPWRLNWESPVDAPWLGTVLHVALECLRVFGTL 523

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489
           LQ   P LA+K+   L V+   R    L
Sbjct: 524 LQPVTPSLADKLLSRLGVSATERGLGEL 551


>gi|289621749|emb|CBI51660.1| unnamed protein product [Sordaria macrospora]
          Length = 613

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 183/507 (36%), Positives = 291/507 (57%), Gaps = 36/507 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y++T I Y NA PH+GH Y M++ADVL R+ +L G   +  TGTDEHG K+ +AA
Sbjct: 60  DNKPFYVTTPIFYVNASPHVGHMYSMVLADVLKRWQKLKGNQAILCTGTDEHGTKVQRAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            +  +  K F D NS  F+++A    I +D FIRTT++ H +  +  W  + DKG IY+ 
Sbjct: 120 MSNDMDPKQFCDLNSAKFQELAAACLIDHDRFIRTTDQDHVEAVKHFWLLLKDKGLIYEA 179

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD---GQYYNA---QHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWY + DE +Y + ++ K  D   G+ Y A     N V+W+EE+ Y FR++A +D+L
Sbjct: 180 KHEGWYCVSDECFYPESQLEKRQDPFTGEVYVASIESGNKVEWIEEKNYHFRMTALKDQL 239

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
           L +Y+++P++I+P  R N+V+ +V + L+DLS+SR      WGI++PDD    +YVW+DA
Sbjct: 240 LEFYKNNPDWIVPHTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDDESQTIYVWVDA 299

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P G +   W        +DILRFH IYWPA LL+ +LPLPK++ SH 
Sbjct: 300 LINYLTKAGY---PTGLQD--WST------QDILRFHCIYWPALLLALDLPLPKRILSHA 348

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               + +K+SKS+GNV++P   +E  G+D +R+++V       D  Y    L       L
Sbjct: 349 HWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMVHNGGISNDADYSNGWLTVEYKKHL 408

Query: 355 ANGIGNLVSR-------SVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            NG+GNL +R       S+   ++ Y DG +       + ++S +   +R L ++   + 
Sbjct: 409 QNGVGNLSARVTRPKQWSLRRAVQSYNDGTMRLQSTGEQINDSCVEHLAR-LDKLASTVD 467

Query: 407 NQLIH----RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLA 459
           N+++      AL +++ L+ E + +    +PW + K  PD  + V   +    E +R   
Sbjct: 468 NEMLQLNPSHALQKIMGLIGETNAFISNAEPWVVVK-KPDSEALVDRIILTAGESLRIAG 526

Query: 460 ILLQAFVPKLANKIFDILFVADENRCF 486
           ILLQ F+P+ A ++ D+L V ++ R F
Sbjct: 527 ILLQPFMPEKAAELLDLLGVENDKRTF 553


>gi|302911964|ref|XP_003050609.1| hypothetical protein NECHADRAFT_96414 [Nectria haematococca mpVI
           77-13-4]
 gi|256731546|gb|EEU44896.1| hypothetical protein NECHADRAFT_96414 [Nectria haematococca mpVI
           77-13-4]
          Length = 769

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/495 (36%), Positives = 267/495 (53%), Gaps = 39/495 (7%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ADVL R+ +++G + L  TGTDEHG KI +AA   G+  K F D N+  FRD+A+V 
Sbjct: 1   MVLADVLKRWQQINGKEALLCTGTDEHGMKIQQAAAKEGMPPKEFCDNNASKFRDLAEVA 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +IS+D FIRTT++ H       W  +  +      +YKG + GWY + DE +Y +D V  
Sbjct: 61  NISHDFFIRTTDEDHKLVVEQFWLLLKTRAPEGLGLYKGQHEGWYCVSDECFYPEDLVQP 120

Query: 144 GADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
               Q            N V+W+ E+ +FF LS Y++KLL +Y+ +P +I P  R NEV 
Sbjct: 121 SVVPQTGRKIMASIETGNEVEWVTEDTWFFPLSKYKEKLLKFYDENPNWIQPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKA 253
           ++V+  L+DLS++R      WGIK P+DP   +YVW+DAL NY+T  G+      D +  
Sbjct: 181 NWVEHHLEDLSITRPASRLSWGIKDPEDPSNTIYVWVDALINYITKAGFGSKWQVDSADK 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+ V+GKDI+RFHAIYWPA L++  LPLPKK+  H        K+SKSLGNV++P
Sbjct: 241 GIWPADVQVVGKDIIRFHAIYWPALLMAVGLPLPKKIVCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              ++   +D LRYFL+R  +   D  Y  D +      +L   IGNL +R    I ++ 
Sbjct: 301 FFAVQRWNLDPLRYFLMRNGSFKGDMSYANDFIIVAYEKELQANIGNLFNR----ISRNK 356

Query: 374 DGMIPTPGAFTESDE-----------------SILSVCSRVLQEIRENMQNQLIHRALAQ 416
            G   T  A   + E                 S+        ++IR  M +  +  AL +
Sbjct: 357 TGRWSTLEATEFAREGKFNDIAGLAAEGPDLLSLEPTLDTAPEKIRNEMDDINLSGALRE 416

Query: 417 VISLVSEVDRYFDAQKPWEL-KKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L+ E +R+     PW + K T+P+   R + V+Y + E +R   I+LQ  +P  A +
Sbjct: 417 VFELLRETNRFISDTAPWHMVKDTSPEARVRLNWVIYRSAEALRIAGIMLQPVMPTKAGE 476

Query: 473 IFDILFVADENRCFQ 487
           + D L V  E R  +
Sbjct: 477 LLDGLGVKPERRTVE 491


>gi|126696331|ref|YP_001091217.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543374|gb|ABO17616.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 514

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 182/476 (38%), Positives = 268/476 (56%), Gaps = 14/476 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   G+ 
Sbjct: 5   ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIE 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D+ S  F +     +IS+D FIRT+ K H       ++++    DIY G   GWY
Sbjct: 65  PKSHCDEISEVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  E + ++ E        Y    H   ++W  EE  FFRLS YQ K +    + P FI
Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIERIINEPSFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     D 
Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISS-DA 238

Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            + S  K     WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+K+
Sbjct: 239 TEHSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL++
Sbjct: 299 GKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K ++  +P       +++ + +     ++    N  N  +  A  +V+SL   
Sbjct: 359 RTSSMSRKWFNNKVPNKEKIF-NEKKLENFAKIAVENYIYNFDNYKLDLAANEVLSLAIN 417

Query: 424 VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  +PW L  +K N      ++Y  +E  R + +LL   +P+L+ KI D L
Sbjct: 418 TNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQL 473


>gi|198452215|ref|XP_001358678.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
 gi|198131835|gb|EAL27820.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
          Length = 588

 Score =  316 bits (810), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 176/506 (34%), Positives = 269/506 (53%), Gaps = 31/506 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA N 
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPAADVRLCTGTDEHGTKIQQAAANH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    +  + S  +R++     I  DDFIRTTE+RH       W+ +  +G IY   YS
Sbjct: 81  KVPVDQYCQEISSRYREVFQAAHIHNDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + +  
Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +P D    +YVW+DAL NYL++
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+      WP    VIGKDIL+FH IYWPAFLL+A L  P++++ H      G+
Sbjct: 260 LGY---PNEEFLNHWPPAQQVIGKDILKFHGIYWPAFLLAAGLQPPQQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y      + +N+++A+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSEMADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD------------ESILSVCSRVLQEIRENMQNQL 409
           +SR+ +  L     + P P     +D            +S+L +  R       N     
Sbjct: 377 LSRACAKSLNPRQ-VYPQPHVEHLADLLRSVDAAKRLRDSLLQLSERCEAHYECNH---- 431

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAF 465
            H      ++ +   + +F++ +PWELK      N  R +T++ +T++ +R   I+LQ  
Sbjct: 432 FHLVADTTMAALHAANNFFESARPWELKTGNEGANEPRLATIIAMTMDALRLCGIVLQPI 491

Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491
           +P+LA ++ D L V    R +  L++
Sbjct: 492 IPQLATRLLDKLSVPASQRGWDCLNE 517


>gi|134105975|ref|XP_777998.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260701|gb|EAL23351.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 582

 Score =  316 bits (809), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 190/497 (38%), Positives = 278/497 (55%), Gaps = 27/497 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQN 64
            Y++T I Y NA PH+GH + +++ DVLARF RL      V+F TGTDEHG KI +AA+ 
Sbjct: 53  FYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTDEHGLKIQQAAKA 112

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + F D  S+ FR +A + + S  DFIRTTE RH       W  +   GDIYKG +
Sbjct: 113 NGVGEQEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKGTH 172

Query: 125 SGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           SGWYS+ DE++Y   +V K   DG+    +  N V W EE  + FRL  ++ K+L  + S
Sbjct: 173 SGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEETNWKFRLGRHK-KVLEKWLS 231

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
            PE + P   R +++  + S L+DLS+SR +    W I +P DP+  +YVW+DAL NY+T
Sbjct: 232 QPESVHPNTVRLDLLRQLSS-LEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     ++  WPAD+HV+GKDI++FHA++WP+ L SA+LP PK++ +H       
Sbjct: 291 VLGYPDWEGKGESVGWPADVHVVGKDIIKFHALHWPSLLHSASLPAPKRIIAHAHWTMSH 350

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD---LANG 357
            K+SKS GNV+DPI  + + G D +R++L+R    G     D D     V      LA+ 
Sbjct: 351 TKMSKSRGNVVDPISAMTQWGEDGVRWYLMR---VGGGLVDDADYNPAEVEVHYRLLADQ 407

Query: 358 IGNLVSR-SVSMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +GNL SR S + +LK  +     G   T     + DE +  + +R+ +E    M+   + 
Sbjct: 408 VGNLFSRISGAKVLKKAEREFDWGNEKTRDRGEDRDEELDGMMARMREEFEGKMEVFGVS 467

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKL 469
           +A A V+ +V   ++ F +  PW     +P   S+V  +T     +R  AILLQ  +P  
Sbjct: 468 QACAGVMDVVMATNKLFTSLAPW-----SPSTPSSVPALTYAYHALRLSAILLQPIIPAK 522

Query: 470 ANKIFDILFVADENRCF 486
           A +  D L V  E R +
Sbjct: 523 AGEALDRLGVPAEERSW 539


>gi|297191075|ref|ZP_06908473.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297150754|gb|EFH30771.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 516

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 179/482 (37%), Positives = 266/482 (55%), Gaps = 19/482 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T + Y NA+PH+G A E++ ADVLAR  R  G  V F TGTD++  K   AA+  
Sbjct: 17  RTYITTTVPYVNARPHLGFALELVQADVLARHGRRSGEQVRFLTGTDDNSLKNVLAAEAE 76

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124
           GV  + FVD+N+  F  +   L +S DDFIRT+ + RH      LW++ ++ GD+Y+  Y
Sbjct: 77  GVGVQEFVDRNAAAFAALRGPLALSSDDFIRTSSDPRHRAGVERLWQRCAEAGDLYRRHY 136

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y   ++    +G+  +    P Q + EE +FFRLS +   L        
Sbjct: 137 EGLYCVGCEQFYTPGDL---EEGRCPDHGTEP-QRVSEENWFFRLSRHAGTLRDLITDGT 192

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             I P  RRNEV+  ++ GL D S+SR   +   WGI +P DP  ++YVW DAL NY+T+
Sbjct: 193 LRIEPASRRNEVLGLIEGGLHDFSVSRSQSRARGWGIPVPGDPDQVVYVWWDALGNYVTS 252

Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY    D +  ++W      +H+ GK +LRFHA+YWPA LLSA LPLP  +  H ++  
Sbjct: 253 LGY-GTGDDTFDEWWRGSGRRVHLAGKGVLRFHAVYWPAMLLSAGLPLPTDILVHDYLTV 311

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G KISKS G  +DP+E+  + G DA+R++L+R++    D  + ++ L  R N+DLA G+
Sbjct: 312 DGRKISKSSGTTVDPVELAADAGTDAVRWWLLRDVPRVGDADFTRERLVDRANSDLAGGL 371

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R V+M+ +  DG  P       + + +   C    + I   +      RA A V 
Sbjct: 372 GNLVNRVVTMVHRYRDGRPPASRPLGLTSKPLAEACDDSPRLIAAALAGFDFRRAAAAVW 431

Query: 419 SLVSEVDRYFDAQKPWELKKT----NPD---RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           ++V E +R  DA +PWE  K     +PD   R    L   ++    LA  L+ F+P  A 
Sbjct: 432 TIVEEANRCVDATRPWESAKAERAGDPDAGQRLDRALDALLQACLVLADRLEPFLPGAAA 491

Query: 472 KI 473
           +I
Sbjct: 492 RI 493


>gi|195392274|ref|XP_002054784.1| GJ22603 [Drosophila virilis]
 gi|194152870|gb|EDW68304.1| GJ22603 [Drosophila virilis]
          Length = 583

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 177/506 (34%), Positives = 268/506 (52%), Gaps = 31/506 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRHPERRVRLCTGTDEHGTKIQQAAAAH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + D+ S  +RD+     I +DDFIRTTE+RH       W  +  +G IY   YS
Sbjct: 81  KVPVGQYCDEVSARYRDVFGAAGIEHDDFIRTTEQRHKQAVAHFWHSLQSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGA-DGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  + ++   A  G  Y+ +  +PV+W EE  Y FRLS +QD +  ++   
Sbjct: 141 GWYCVSDETFLTESQLRLDATSGTRYSLESGHPVEWTEETNYMFRLSQFQDDV-QHWVKQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P + +  ++  +   L D+S+SR      W I +P+D    +YVW+DAL NYL++
Sbjct: 200 KACIRPAKFQKILLDTLSEPLPDVSVSRPANRVHWAIPVPNDDTQTIYVWLDALINYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+      WP    +IGKDIL+FH IYWPAFLL+A L  P+++  H      G+
Sbjct: 260 LGY---PNEQYRADWPPAQQIIGKDILKFHGIYWPAFLLAAGLAPPQQLHVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG +      + +N++LA+ +GNL
Sbjct: 317 KMSKSRHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPG------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +SR+ +  L +   + P P             A     ES+L +  R  Q    N     
Sbjct: 377 LSRACAKSL-NPQQIYPEPHVEHLPHLLHDVDAAKRLQESLLQLQGRCEQHYEGNH---- 431

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQLAILLQAF 465
            H      I+ +   + +F+  KPWELK      N  R  T++ +T++ +R   I+LQ  
Sbjct: 432 FHLVADTAIAALHATNNFFECAKPWELKAGGSSPNAPRLQTIIAMTMDALRLCGIVLQPM 491

Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491
           +P+L +++ D L V    R ++ L +
Sbjct: 492 IPQLTSRLLDKLNVPTSQRSWRHLQE 517


>gi|194900723|ref|XP_001979905.1| GG21397 [Drosophila erecta]
 gi|190651608|gb|EDV48863.1| GG21397 [Drosophila erecta]
          Length = 579

 Score =  315 bits (808), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 180/507 (35%), Positives = 272/507 (53%), Gaps = 33/507 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    + D  S+ +R++     I  +DFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GIPVAKYCDDISQRYREVFRSASIQPEDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVGHWVKAE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +PDD    +YVW+DAL NYL++
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDESQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+   +  WP    VIGKDIL+FH IYWPAFLL+A L  P +++ H      G+
Sbjct: 260 VGY---PEEQFSAHWPPAQQVIGKDILKFHGIYWPAFLLAAGLKPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++   +  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAARQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMI-PTPGAFTESD------------ESILSVCSRVLQEIRENMQNQ 408
           +SR+ +  L    G I P+  A   +D            +S+L +  R       N    
Sbjct: 377 LSRACAKSLN--PGQIYPSASAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNH--- 431

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQA 464
             H      ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ 
Sbjct: 432 -FHLVADTAMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQP 490

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ 491
            +P+LAN++ D L V    R +  L +
Sbjct: 491 IIPQLANRLLDKLSVPAAQRGWNYLAE 517


>gi|195145300|ref|XP_002013634.1| GL23293 [Drosophila persimilis]
 gi|194102577|gb|EDW24620.1| GL23293 [Drosophila persimilis]
          Length = 592

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/506 (34%), Positives = 269/506 (53%), Gaps = 31/506 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA N 
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPTADVRLCTGTDEHGTKIQQAAANH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    +  + S  +R++     I  DDFIRTTE+RH       W+ +  +G IY   YS
Sbjct: 81  KVPVDQYCQEISSRYREVFQAAHIHNDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEV-YKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++    A G  Y+ +  +PV+W EE  Y FRLS +QD +  + +  
Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR +    W I +P D    +YVW+DAL NYL++
Sbjct: 201 AR-IRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDASQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+      WP    VIGKDIL+FH IYWPAFLL+A L  P++++ H      G+
Sbjct: 260 LGY---PNEEFLDHWPPAQQVIGKDILKFHGIYWPAFLLAAGLQPPQQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y      + +N+++A+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSEMADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD------------ESILSVCSRVLQEIRENMQNQL 409
           +SR+ +  L     + P P     +D            +S+L +  R       N     
Sbjct: 377 LSRACAKSLNPRQ-VYPQPHVEHLADLLRSVDAAKRLRDSLLQLSERCEAHYECNH---- 431

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAF 465
            H      ++ +   + +F++ +PWELK      N  R +T++ +T++ +R   I+LQ  
Sbjct: 432 FHLVADTTMAALHAANNFFESARPWELKTGNEGANEPRLATIIAMTMDALRLCGIVLQPI 491

Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491
           +P+LA ++ D L V    R +  L++
Sbjct: 492 IPQLATRLLDKLSVPASQRGWDCLNE 517


>gi|312882030|ref|ZP_07741784.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370325|gb|EFP97823.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 499

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 183/477 (38%), Positives = 267/477 (55%), Gaps = 22/477 (4%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           +T I Y N +PH+GHAY  I+AD+  R+  L   +    TGTDEHG KI +AA  +    
Sbjct: 6   TTPIFYANGEPHLGHAYSGILADIFHRYSLLANSESCLITGTDEHGLKITQAASKSCTEV 65

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           + FVD+ S +F ++   L I  D FIRTT++ H      +WKK+ DKGDIY G Y G Y 
Sbjct: 66  EDFVDRKSASFAELWSALKIDPDVFIRTTDRFHAQFVEKVWKKLRDKGDIYLGNYQGQYC 125

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           +  E +YN  ++    D +Y       VQ  EEE Y FRLS Y+++LL +Y S+ +FI+P
Sbjct: 126 IGCEQFYNKRDL---VDEKYCAIHKTEVQSFEEETYLFRLSRYREQLLEFYTSNQDFIIP 182

Query: 190 IERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYL 245
              ++ V+  +K   L+DLS+SR    WGI +P D  + +YVWIDAL +YL+     GY 
Sbjct: 183 TFTQDYVVKQLKEEPLEDLSVSRINHKWGISVPGDENHTIYVWIDALFSYLSAIQKAGY- 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            NPD  K        H++GKDIL+FHAIYWPAFLL+  LPLPK +  HG+   +G KISK
Sbjct: 242 -NPDQLKKT-----THILGKDILKFHAIYWPAFLLALELPLPKHLIVHGWWKVEGHKISK 295

Query: 306 SL-GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           S+   V+ P     E+  D LRY L+++    +DG   +D LK  +NADL N   NLV R
Sbjct: 296 SIPETVVHPKAFQTELSNDGLRYALIKQKPLFRDGDLVQDSLKHVINADLVNNFANLVKR 355

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421
           + ++ILK   G I            I++     L ++    Q     ++ + L Q++   
Sbjct: 356 NNTLILKQLSGEIVGITDLDIECRQIVTEAEVKLDKVINGYQTFDILIVSQLLNQIL--- 412

Query: 422 SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +E++R+F  + PW + K    +  S+  +V   V+R++AIL    +P L+  I + L
Sbjct: 413 TELNRFFHERSPWLINKGLTREHVSSTCFVVANVVREIAILYSPIIPSLSESILNEL 469


>gi|26006502|gb|AAN77311.1| Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 579

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 176/488 (36%), Positives = 272/488 (55%), Gaps = 22/488 (4%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++RL    V+F TGTDEHG+KIA +A+  G   K   D  S +++ +   LDI YD FIR
Sbjct: 70  YYRLLDKRVVFITGTDEHGEKIATSAEACGRNPKDHCDTISNSYKMLWADLDIEYDKFIR 129

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           TT+++H       + ++ D GDIY+  Y G Y +  E Y ++ E+    + +       P
Sbjct: 130 TTDRKHEAVVNDFYSRVLDSGDIYRADYEGLYCVSCEEYKDEKEL---GENKCCPVHLKP 186

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               +E+ YFF LS YQ +L      +P F+ P  R NEV  +VKSGL+D S+SR + +W
Sbjct: 187 CVPRKEDNYFFALSKYQHQLEDLLTKNPNFVRPSHRLNEVQGWVKSGLRDFSISRASVEW 246

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILR 269
           GI +P+D +  +YVW DAL  Y++    LD  DG KA         WPA LH+IGKDILR
Sbjct: 247 GIPVPNDTKQTIYVWFDALLGYIS--ALLD--DGEKASLQQAVERGWPASLHLIGKDILR 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA+YWPA L+SA + +P  VF HGF+   G K+ KSLGN ++P +++   GVD++RYF 
Sbjct: 303 FHAVYWPAMLMSAGISVPDAVFGHGFLTKDGMKMGKSLGNTLEPKDLVNRFGVDSVRYFF 362

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +RE+  G DG Y ++     VNA LAN IGNL++R++ ++ K+    +           S
Sbjct: 363 LREVEFGNDGDYSEERFINIVNAHLANTIGNLLNRTLGLLKKNCKSTLAFDSIAAADGIS 422

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRAST 446
           +      ++ + ++  +N L+  A   ++ + +  + Y D Q PW   K    + ++A+ 
Sbjct: 423 LKDNVENLVDKAKDQFENLLLSSACETLMEIGNLGNLYIDEQAPWSCFKQGGESAEKAAK 482

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR---LKPGFMLHKT 502
            L + +E +R +AI L    P L+ +I+  L F  D+ R  +  D +   LK G ++ + 
Sbjct: 483 DLVIILETMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWEDTKWGGLKAGQVMMEP 542

Query: 503 FDPIFPRF 510
             P+F R 
Sbjct: 543 -KPVFARI 549


>gi|255723315|ref|XP_002546591.1| methionyl-tRNA synthetase, mitochondrial [Candida tropicalis
           MYA-3404]
 gi|240130722|gb|EER30285.1| methionyl-tRNA synthetase, mitochondrial [Candida tropicalis
           MYA-3404]
          Length = 568

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 193/527 (36%), Positives = 290/527 (55%), Gaps = 45/527 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-TGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD  +++ +L+     F  TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRSKWEKLNPNQKSFMLTGTDEHGLKIQA 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K  VD+ S+NF  +A+  +++YD FIRTT+  H +  +  W  + +KG IY
Sbjct: 75  TAEKQGIEPKELVDKVSQNFAYLAEKSNVNYDRFIRTTDPDHIEVVKYFWNLMMEKGYIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE +Y + ++ +   DG+         N V + EE  YFF+LS +QD+L
Sbjct: 135 TDTHSGWYSVSDETFYPETQIEEVEKDGKMVKISIETKNEVVYQEETNYFFKLSQFQDQL 194

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           + Y ESHP+FI P  R   +++ +K   L DLS+SR +    W I++P+DP   +YVW D
Sbjct: 195 IEYLESHPDFIKPYHRYQFILNELKQNKLTDLSISRPSSRLKWSIEVPNDPSQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY +  + ++ +  WPA  H+IGKDI+RFH IYWP FL++A + LPK+V  
Sbjct: 255 ALLNYITAAGYPETFNNNELSNMWPA-THIIGKDIIRFHCIYWPIFLMAAGVELPKQVIV 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H   L  G K+SKSLGNV+DPIE+ E  GVD +R+FLV       D  +  D L++  +A
Sbjct: 314 HSHWLCDGFKMSKSLGNVVDPIEISEYYGVDPVRFFLVENSNIEDDCKFSVDLLERSRDA 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCS-------RVLQEIREN 404
            L     NL+SR  +      + +   T G F   ++ I  V +       +  QE+  N
Sbjct: 374 VLGK-YCNLISRIGAKNFNIQEAVEYSTSGKFDNIEQIIKDVDNSNGDDLIKASQELIAN 432

Query: 405 MQNQLIH-----------RALAQVISLVSEVDRYFDAQKPWELKK-----TNPDRAST-- 446
           + N  I            +A+     ++++ +  F   +PW+  K     + P+ A +  
Sbjct: 433 LNNLYITMDTHFKNFEYIKAIQAWWGVINQGNYIFQTSEPWKYSKLLKDESIPEEAKSKY 492

Query: 447 ------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA--DENRC 485
                 V Y+  E +R  +IL+Q  +P+L+NKI + L V   D   C
Sbjct: 493 LTYINYVTYLCAETMRISSILIQPVMPELSNKILNRLQVQSRDSESC 539


>gi|238882840|gb|EEQ46478.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 577

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 194/545 (35%), Positives = 299/545 (54%), Gaps = 53/545 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  +A+  D++YD FIRTT+  H +  R  W  + +KG IY
Sbjct: 75  TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ +   +EV K       +++  N V + EE  YFF+LS +Q++L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQEETNYFFKLSMFQEQL 194

Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++  ++ + L DLS+SR +    W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +    +   +KF       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPAT-HVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGNV+DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR------SVSMILKDYDG--------MIPTPGAFTESDESILS 392
           ++  +A L     NL+SR      S+   +K +          +I T     +S E +LS
Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSFASGEFNNIREIIETYTINKDSVEGLLS 432

Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPW---------- 434
             +++  ++ + + NQ+ H        RA+    S++++ ++ F + +PW          
Sbjct: 433 SLNKLTTDLND-LYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPE 491

Query: 435 ---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              ELK+      +  +Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +L  
Sbjct: 492 TPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTLSA 551

Query: 492 RLKPG 496
            L+ G
Sbjct: 552 DLQYG 556


>gi|328869504|gb|EGG17882.1| methionyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 640

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 272/500 (54%), Gaps = 21/500 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NA PHIGH Y  ++AD   R+++L G      TGTDEHG K+ +AA+    
Sbjct: 101 YITTPIFYVNASPHIGHLYTALLADAACRWNKLKGFPTFLVTGTDEHGTKVQEAAKKNNQ 160

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T  + D  S  F+ + ++ +I  +D+IRTT+ RH  +   +W ++   G IYKG Y GW
Sbjct: 161 NTLQYCDSISSTFKQLFELANIEMNDYIRTTQDRHKKSVHCIWDQLIKSGHIYKGRYEGW 220

Query: 128 YSLRDEAYYNDDEVYKGADGQ-------YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           Y   DEA+  ++++      +             NPV +  EE Y F+LSA+++++  + 
Sbjct: 221 YCTSDEAFLTEEQIEDKVINEKTKETIKVSKESGNPVVFTVEENYMFKLSAFKEQIKEWL 280

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
            + P  I P  R ++V++ +  GL+DLS+SR +   +WGI++P D    +YVW+DALTNY
Sbjct: 281 VATPNPITPASRVSQVLNAL-DGLRDLSVSRPSSRVEWGIRVPGDDSQTIYVWLDALTNY 339

Query: 239 LTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           LT  GY +  D      W  ++ H+IGKDI++FH +YW AFL +    LP +V +H    
Sbjct: 340 LTVAGYPNQTD--PLSVWNYNVEHLIGKDIIKFHTVYWVAFLSAIGAKLPSRVVAHAHWT 397

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +  K+SKSLGNVIDP + IE+ GVD +RYFL+R      DG +    +  ++N DLA+ 
Sbjct: 398 VERVKMSKSLGNVIDPFKTIEQFGVDPIRYFLLRCGGMENDGDFSTLEVISKLNNDLADT 457

Query: 358 IGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            GNLVSRS S  L   +     P+       D+ +++  + +   I +          L 
Sbjct: 458 YGNLVSRSSSGSLLPTNTFPTRPSDNDLLPIDKDLINSINNLKGHIEDKFDRYDFKGGLE 517

Query: 416 QVISLVSEVDRYFDAQKPWEL------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +I  +  V++YF    PW L      K  +  R + V+Y+  E IR   +LL + +P+ 
Sbjct: 518 DIIEFLYTVNKYFVEIAPWTLVPKPGKKAGDLVRLNNVMYIIFESIRVSTLLLSSIIPQS 577

Query: 470 ANKIFDILFVADENRCFQSL 489
           A K+ D L +  ++R F  L
Sbjct: 578 AVKVLDHLSIPPKDRSFDQL 597


>gi|26554387|ref|NP_758321.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26454397|dbj|BAC44725.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 1087

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 189/510 (37%), Positives = 282/510 (55%), Gaps = 30/510 (5%)

Query: 5    EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +K YI+T I YP+  PHIGHA+  +IADVL R+ +  G +  F TG DEHGQKI + A+ 
Sbjct: 569  KKFYITTPIYYPSGNPHIGHAFTTLIADVLTRYKKKLGYETFFITGMDEHGQKIEEKAKE 628

Query: 65   AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              +  +  VD+ ++ F ++  +L I Y  FIRTT + H +  +  + ++  K  IY G +
Sbjct: 629  LNLKPQELVDKYAKVFDNLWKLLGIEYSHFIRTTAEYHKNVVQETFSELLKKDFIYLGVW 688

Query: 125  SGWYSLR-DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
             G Y +  +E Y  +  V K  D + Y AQ +P+   EEE YF ++  ++ K +S +   
Sbjct: 689  KGLYCVSCEENYTKNIAVRKENDDKLYCAQLHPLIQKEEESYFLKIKQFK-KYISSFLKD 747

Query: 184  PEFILPIERRNEVI-SFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            P  + PI R NE+  SF+ +    DLS+SR  F WGI+I ++P++++YVW+DAL NYL+ 
Sbjct: 748  PNLVYPITRINELFNSFLNNDDFDDLSISRSNFSWGIQIKENPKHVVYVWLDALLNYLSG 807

Query: 242  TGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
             GY    D +  KFW +     + ++ K+I RFH IYWP  L    L  P K  SHG+I+
Sbjct: 808  LGYRQKDDSNFQKFWNSQDAEIVQLMSKEITRFHCIYWPIMLEMLGLRKPTKYISHGWII 867

Query: 298  HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             +  K+SKSLGNV+DPI  I   G DA RY+L++E++  +D  + +  L    N DLAN 
Sbjct: 868  TEQGKMSKSLGNVLDPIYFINTYGRDAFRYYLLKELSLKEDSVFSEKLLINTFNKDLANN 927

Query: 358  IGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            +GNL +RS+ MI K  DG+IP       +F    E  L      +  I E +    I + 
Sbjct: 928  VGNLFNRSIGMINKYRDGIIPKYSKPKLSFNIEFEKQLKQFDDEITTIIEKLN---IQKI 984

Query: 414  LAQVISLVSEVDRYFDAQKPWELKKTNPDR-----ASTVLYVTVEVIRQLA-ILLQAFVP 467
            L++VI L++E + + +  KPW+LKK N ++      S +L     VI  L  +L+     
Sbjct: 985  LSRVIDLINECNFFIEQVKPWDLKKENNEKDLDCFLSLILNAVKRVIYYLEPVLIDGSKE 1044

Query: 468  KLA-----NKIFDILFVADENRCFQSLDQR 492
             L      +  FDI FV D    F SLD +
Sbjct: 1045 ALKQFNIDSSKFDIKFVTD----FSSLDNQ 1070


>gi|293349795|ref|XP_001066991.2| PREDICTED: rCG22562-like [Rattus norvegicus]
 gi|293361682|ref|XP_237156.4| PREDICTED: rCG22562-like [Rattus norvegicus]
 gi|149046149|gb|EDL99042.1| rCG22562 [Rattus norvegicus]
          Length = 586

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 183/512 (35%), Positives = 267/512 (52%), Gaps = 32/512 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 37  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSGSTRFSTGTDEHGLKIQQAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 97  ATAGLAPIELCDRVSAQFLQLFREAGISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G          +PV W +EE Y F+LS +++ L 
Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 217 RWLRNNPQAITPEPFHQVVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   PD     +WPA  H+IGKDIL+FHAIYWPA LL A L  P ++  H  
Sbjct: 277 VNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRICVHSH 333

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400
           + +G L++R  +  +    G  P+         PG    S      D ++++  + + + 
Sbjct: 394 DALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLMGPSVRVQAEDYALVNAVATLPKL 452

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           +     +  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R 
Sbjct: 453 VAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLTWESPADAPWLGTVLHVALECLRV 512

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ   P LA+K+   L V+   R    L
Sbjct: 513 FGTLLQPVTPNLADKLLSRLGVSTTERSLGEL 544


>gi|309356566|emb|CAP36935.2| hypothetical protein CBG_19783 [Caenorhabditis briggsae AF16]
          Length = 1232

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 185/486 (38%), Positives = 284/486 (58%), Gaps = 18/486 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62
           Y+++ I Y NA+PHIGHAY  ++ D   R+++L          LF+ GTDEHG KI +A+
Sbjct: 14  YVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSIGTDEHGSKIFQAS 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T K F DQ S  F  + D L+IS+ +FIRTT+ +H ++ +  W+ + D+G IYK 
Sbjct: 74  QLAGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHFWRVLQDRGHIYKS 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSG+YS+ +E +  ++EV + A+ +         V+W+EEE Y FRLS +++K+  + E
Sbjct: 134 SYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFRLSEFREKVGEWIE 193

Query: 182 SHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              + + P++ ++  + S    G   +S +RK   WGI +PDDP   +YVW+DAL NYLT
Sbjct: 194 K-TDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTIYVWLDALVNYLT 252

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +GY  +        WP    VIGKDI +FH  YWPAFL++A+LPLP++VF HG  L   
Sbjct: 253 VSGYPKD-----RLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVHGHWLVDN 307

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV++P   I++   + LRYFL+++     D  +  +   + VN+DL N +GN
Sbjct: 308 VKMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSDLVNNVGN 367

Query: 361 LVSRS-VSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           L++RS V  I K   Y   +       E  E +L +     ++  E   +   ++ + Q+
Sbjct: 368 LLNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYYYKGIEQL 427

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + E +R F   +PW  K+T+ +R  ++L+VT E IR ++ILLQ   PK+AN   D L
Sbjct: 428 MLTMKEANRVFQLSQPW--KETDSERLESLLFVTYETIRIVSILLQPITPKMANFCLDRL 485

Query: 478 FVADEN 483
            V   N
Sbjct: 486 GVDQRN 491


>gi|6094406|sp|O74634|SYMM_CANAL RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3641642|dbj|BAA33373.1| mitochondrial methionyl-tRNA synthetase [Candida albicans]
          Length = 577

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 193/545 (35%), Positives = 299/545 (54%), Gaps = 53/545 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKAFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  +A+  D++YD FIRTT+  H +  R  W  + +KG IY
Sbjct: 75  TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ +   +EV K       +++  N V + EE  YFF+LS +Q++L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQEETNYFFKLSMFQEQL 194

Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++  ++ + L DLS+SR +    W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +    +   +KF       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPAT-HVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGN++DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNLVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR------SVSMILKDYDG--------MIPTPGAFTESDESILS 392
           ++  +A L     NL+SR      S+   +K +          +I T     +S E +LS
Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSFASGEFNNIREIIETYTINKDSVEGLLS 432

Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPW---------- 434
             +++  ++ + + NQ+ H        RA+    S++++ ++ F + +PW          
Sbjct: 433 SLNKLTTDLND-LYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPE 491

Query: 435 ---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              ELK+      +  +Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +L  
Sbjct: 492 TPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTLSA 551

Query: 492 RLKPG 496
            L+ G
Sbjct: 552 DLQYG 556


>gi|194222442|ref|XP_001917887.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Equus caballus]
          Length = 593

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/507 (36%), Positives = 268/507 (52%), Gaps = 32/507 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R+ RL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRYRRLRVPSAAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      DQ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPAELCDQVSAQFQQLFREASISSTDFIRTTEARHRVAVQHFWGVLKARGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +  G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P  I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGDPRAITPEPFHHAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVIGY---PNAEFKSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRSCLDRYTVDGFRYFLLRQGVPHWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT---------PGAFTES------DESILSVCSRVLQE 400
           + +G L++R  +  +    G  P          PG    S      D +++S  + + ++
Sbjct: 401 DALGGLLNRCTAKRINP-SGTYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQ 459

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQ 457
           + ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R 
Sbjct: 460 VADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWQSPVDAPWLGTVLHVALECLRV 519

Query: 458 LAILLQAFVPKLANKIFDILFVADENR 484
              LLQ   P LA+K+   L V+   R
Sbjct: 520 FGTLLQPVTPSLADKLLSRLGVSATER 546


>gi|68467721|ref|XP_722019.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
 gi|68468040|ref|XP_721859.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
 gi|46443801|gb|EAL03080.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
 gi|46443966|gb|EAL03244.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
          Length = 577

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 193/545 (35%), Positives = 296/545 (54%), Gaps = 53/545 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPICYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  +A+  D++YD FIRTT+  H +  R  W  + +KG IY
Sbjct: 75  TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ +   +EV K       +++  N V + +E  YFF+LS +Q++L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQKETNYFFKLSMFQEQL 194

Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++  ++ + L DLS+SR +    W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +    +   +KF       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPAT-HVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGNV+DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR--------------SVSMILKDYDGMIPTPGAFTESDESILS 392
           ++  +A L     NL+SR              S S    +   +I T     +S E +LS
Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSSASGEFNNIREIIETYTINKDSVEGLLS 432

Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPW---------- 434
             S++  ++ + + NQ+ H        RA+    S++++ ++ F + +PW          
Sbjct: 433 SSSKLTTDLND-LYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPE 491

Query: 435 ---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              ELK+      +  +Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +   
Sbjct: 492 TPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTFGA 551

Query: 492 RLKPG 496
            L+ G
Sbjct: 552 DLQYG 556


>gi|322696090|gb|EFY87887.1| methionyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 891

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 183/526 (34%), Positives = 275/526 (52%), Gaps = 49/526 (9%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ADVL R+ ++ G +  F TGTDEHG KI +AA   G+  K F D  S  FR++A   
Sbjct: 1   MVLADVLKRWQQIKGKETFFLTGTDEHGMKIQRAAAKEGIAPKEFCDNYSNKFRELAAAG 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKIS----DKGDIYKGCYSGWYSLRDEAYYNDDEV-- 141
           DISYD FIRTT+  H +     W ++     +  ++YKG + GWY++ DE +Y +D V  
Sbjct: 61  DISYDAFIRTTDLEHKEAVSEFWLQLKHTLPEHLELYKGTHEGWYAVSDECFYPEDLVRP 120

Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G      +   + V+W++EE +FF L+ Y+D LL +Y+ +P +I P  R NEV 
Sbjct: 121 DIVPQTGKKIMVSDETGSEVEWVKEETWFFPLTKYKDALLKFYDENPNWITPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKA 253
           ++V++ L+DLS++R      WGI  P+D    +YVW+DAL NY+T  GY    +      
Sbjct: 181 NWVENHLEDLSITRPAARLSWGIPDPEDHNQTIYVWVDALINYITQAGYGRKWHSSSDNT 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+ +IGKDILRFHAIYWPA L++ +LPLPK++  H        K+SKSLGNV++P
Sbjct: 241 GLWPADMQIIGKDILRFHAIYWPALLMALDLPLPKQLLCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR--------- 364
              ++   +D LRYFL+R  +  KD  Y    +      +L   IGNL+ R         
Sbjct: 301 FFAVQRWDIDPLRYFLMRNGSFTKDMSYSNQLIGSVYAKELQANIGNLLYRIARPKVTSK 360

Query: 365 -----SVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                +V    +   G IP   +   F   D+ +  + S   +E    M+      A+ +
Sbjct: 361 WSTLEAVGAFRRGAFGEIPGHTSQQLFVSLDDHLEKITSAFFEE----MEKFNTGGAIRE 416

Query: 417 VISLVSEVDRYFDAQKPWELKKT-NPDRA---STVLYVTVEVIRQLAILLQAFVPKLANK 472
           V +L+ E +RY    +PW L K+ NP      + V+Y   E +R   ILLQ  +P  A+ 
Sbjct: 417 VFNLLRETNRYVSDTEPWNLVKSPNPQSRILLNLVIYNCAEALRIAGILLQPIMPTKASL 476

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLH----------KTFDPIFP 508
           + + L V ++ R  +   +   P +             K +D IFP
Sbjct: 477 LLNELGVREDRRTLEFASKGKDPEYGTEAKTGDSAARLKKWDTIFP 522


>gi|126466399|ref|YP_001041508.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015222|gb|ABN70600.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 500

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 181/472 (38%), Positives = 276/472 (58%), Gaps = 17/472 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA PHIGHAY  + ADVLAR+HRL G +V F TG DEHG K+ +AA+  G
Sbjct: 5   FYITTPIYYPNAPPHIGHAYTTVFADVLARYHRLIGDEVFFMTGNDEHGLKLQRAAEKKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  K FVD+ +  ++   ++LDISYD FIRTT+  H    +   +K+ DKG +YK  Y+G
Sbjct: 65  VHPKQFVDEMADVYKKYWELLDISYDYFIRTTDDYHEKVVKTAIQKLYDKGLVYKASYAG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           WY +  E +Y+  E Y   +G+ +   H  P++W+EEE Y+F+LS ++D ++   ++  +
Sbjct: 125 WYCVDCEKFYSPGE-YIEINGKPHCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNK-D 182

Query: 186 FILPIERRNEVISFV-KSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            + P     EV+  V K GL+D+S++R  +   WGI++P D  Y +YVW DAL NY++  
Sbjct: 183 IVYPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISGI 242

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GYL++ D    K+WP   HVIGKDIL FH + W + L + ++ LPKK+  H F++++G K
Sbjct: 243 GYLEDMDRFN-KYWPNVHHVIGKDILWFHTVVWFSILKALDIELPKKLLVHAFLINRGLK 301

Query: 303 ISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           I KS GNVI   ++I+     D +RY L+R     KD     +      N++LA+ +GNL
Sbjct: 302 IGKSAGNVIAIEDLIDRYQDSDGVRYILMRVFNMDKDVDVSTELFDSIYNSELADTLGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   +  K   G++       E D+ + +     L +  E M+   + RA+  V+ L+
Sbjct: 362 VRRIGVLAKKKLGGIVYK----REVDKELSTSIVETLNKYNEYMEAYDVSRAIQVVMDLL 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + + Y +  +PWE  K +P +    LY  +E IR    +L   +PK A+K+
Sbjct: 418 RKANAYVNLTRPWE--KMDPGKE---LYSLLETIRASTTMLYPIIPKAASKV 464


>gi|189240952|ref|XP_971597.2| PREDICTED: similar to methionine-tRNA synthetase [Tribolium
           castaneum]
          Length = 552

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 175/506 (34%), Positives = 276/506 (54%), Gaps = 27/506 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +   K +++T I Y NA PHIGH Y  +IAD L R+ ++ G     F+TGTDEHG KI +
Sbjct: 15  QSNSKFFVTTPIYYVNASPHIGHLYSSVIADALYRWQQVLGAGKFKFSTGTDEHGSKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA         +  + S +++ +++V  ISY DF+RT+++ H       W  + +KG I+
Sbjct: 75  AAHKNNTNPSDYCTRVSSDYKRLSEVFSISYTDFVRTSDEEHKKCVHKFWNVLKNKGKIF 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK--GADGQ---YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
              Y+GWY + DE++  + ++ +  G DG+         +PV+W+EE  Y F L + QD 
Sbjct: 135 SSKYAGWYCISDESFLTESQLKEKVGPDGRKTIISGESGHPVEWIEEVNYMFPLGSLQDD 194

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
           +  Y+      + P + +  ++  V  G L D+S+SR      WGI++PDD    +YVW+
Sbjct: 195 V-KYWLRSENAVRPAKFQKILLDMVSKGPLPDISISRPASRVHWGIQVPDDETQTVYVWL 253

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY      S  + WP  + VIGKDIL+FH IYWP+FL++A L  P  +  
Sbjct: 254 DALVNYLTAAGY---SHASLHQIWPPSVQVIGKDILKFHGIYWPSFLIAAGLDPPLSILC 310

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H      GEK+SKS  NV+ P +  E    D LRYFL+RE     DG Y    + + +N+
Sbjct: 311 HSHWTVDGEKMSKSKNNVVCPFQRSEIYSSDGLRYFLLREGVAHSDGNYSDTKVIRILNS 370

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRE------- 403
           +LA+ +GNL+SR     L  +      P     + ES+ S  V  ++++++         
Sbjct: 371 ELADTLGNLLSRCCGTALNPHQTF---PKIEASAFESVASSDVTKKLIEDVATLPDVCMG 427

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAIL 461
           +  N   ++A+ +VI+ + + + +F+  KPWELKK +        VL++T+E +R   IL
Sbjct: 428 HYSNFNFYKAVDRVIATLHQANLFFETFKPWELKKESAKTRELDVVLHLTLETLRVCGIL 487

Query: 462 LQAFVPKLANKIFDILFVADENRCFQ 487
           LQ  +P +A+ + + + VA E R F 
Sbjct: 488 LQPIIPNIASNLLNKINVARERRTFS 513


>gi|308470944|ref|XP_003097704.1| hypothetical protein CRE_14236 [Caenorhabditis remanei]
 gi|308239822|gb|EFO83774.1| hypothetical protein CRE_14236 [Caenorhabditis remanei]
          Length = 539

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 183/486 (37%), Positives = 274/486 (56%), Gaps = 23/486 (4%)

Query: 14  AYPN----AQPHIGHAYEMIIADVLARFHRLDGLD-------VLFTTGTDEHGQKIAKAA 62
            +PN    ++PHIGHAY  ++ D   R++ L   +        LF+ GTDEHG KI +A+
Sbjct: 34  TFPNLFSISEPHIGHAYTAVLCDTAYRWNVLKNSNNQNSDSRALFSIGTDEHGSKIYQAS 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q A  T K F DQ S  F ++ + L++S+  FIRTT+ +H +  +  WK +S  G IYK 
Sbjct: 94  QLAKKTPKEFCDQVSSKFSNLFENLNLSHTHFIRTTDSKHSEAVQTFWKTLSSNGYIYKS 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSG+YS+ DE +  ++EV K  D         PV+W+EEE Y FRLS +++K+  + E 
Sbjct: 154 SYSGYYSITDECFIPENEVEKRNDKMVLKTTSQPVEWIEEENYMFRLSEFREKVKEWIEK 213

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             + + P++ +   + S        +S +R    WGI +PDDP   +YVW+DAL NYLT 
Sbjct: 214 -TDVVYPVKYKTLALDSLTMEDDLSISRTRSRLSWGIPVPDDPSQTIYVWLDALVNYLTV 272

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +GY       K   WP    +IGKDI +FH  YWPAFL++ANL LPKKVF HG  L    
Sbjct: 273 SGY-----PQKQFVWPPTCQIIGKDITKFHLFYWPAFLMAANLSLPKKVFIHGHWLVDNV 327

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P E +++   + LRYFL+++     D  +      + +N+D+ N +GNL
Sbjct: 328 KMSKSLGNVVNPNETMDKFTSEGLRYFLLKQGNPSSDCSFSWSSCLEMINSDMVNNVGNL 387

Query: 362 VSRS-VSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           V+RS V+ I K  +Y  +        E  E ++ +     ++  E     + ++ +  ++
Sbjct: 388 VNRSTVAKINKSGEYPKVESLESKVKEDTEKLMEMLEESYEKCIELYNEMMYYKVIEHLM 447

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++ E +R F   +PW  K+TN +R  +VLYVT E IR ++ILLQ   PK+A    D L 
Sbjct: 448 LIMKEANRVFQLSQPW--KETNSERLESVLYVTYETIRVVSILLQPITPKMAAFCLDRLG 505

Query: 479 VADENR 484
           V  E R
Sbjct: 506 VKAEKR 511


>gi|302684835|ref|XP_003032098.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8]
 gi|300105791|gb|EFI97195.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8]
          Length = 539

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 185/509 (36%), Positives = 273/509 (53%), Gaps = 52/509 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           YI+T I YPNA PHIGH Y ++IAD+ AR+ RL   +    F  GTDEHG KI +AA+  
Sbjct: 30  YITTPIFYPNAVPHIGHLYSLVIADIFARYSRLRHPEKPTYFLAGTDEHGIKIQRAAEAR 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G     F D  S  FR ++   DISY  F+RTT ++HH     +WK++ +KG IYK  Y+
Sbjct: 90  GEEPLAFCDTLSAQFRRLSQAADISYTVFMRTTSEQHHRAVVDVWKRLDEKGLIYKAAYA 149

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ-------YYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           GWYS+ DE +Y D +V    D +             N V+W  EE Y FRLSA+QD LL 
Sbjct: 150 GWYSVSDECFYTDAQVESVPDPKDPTKTIMISTETKNAVEWSSEENYMFRLSAFQDALLK 209

Query: 179 YYESH---------PEFILPIERRNEVISFVKSG-LKDLSLSR--KTFDWGIKIPDDPQY 226
           +Y++          P  I P +   +++  +++  L DLS+SR      WG+ +P DP++
Sbjct: 210 HYKNSADANGTRPLPTRIYPPQAHAQIVDILENAPLADLSISRPRSRLSWGVPVPGDPEH 269

Query: 227 IMYVWIDALTNYLTTTGYLDNPD-------GSKAKF-WPADLHVIGKDILRFHAIYWPAF 278
            +YVW DAL  YL+  GY    D       G+ A+  WP +L VIGKDILRFHA+Y PA 
Sbjct: 270 SIYVWFDALLVYLSGVGYPFKQDAAGVFDQGAIARSGWPPNLQVIGKDILRFHALYLPAV 329

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L++ N PLP ++ SHG    +G K+SKSLGNV DP + +E  GVD +RY+L R    GK 
Sbjct: 330 LVALNFPLPGRLLSHGHWTVEGRKMSKSLGNVADPFDAMERHGVDCVRYYLAR--VGGK- 386

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
            F D  G       + A G    +   V   L   D +             + ++   + 
Sbjct: 387 -FRDDVG-------EYAMGYHTALCILVLSALATDDPL-----------RELHTIAKALP 427

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E + +  +  A+  +   +  +++ F    P++ K T+P+ A  +  V+V+++R +
Sbjct: 428 EQVEERLLDMDVAGAITHITEALKLLNKIFGDVAPFQ-KTTSPEAAYNLHVVSVDLLRVV 486

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQ 487
            + LQ F PK A  + D L V +  R +Q
Sbjct: 487 GVCLQPFAPKAAGVLLDALRVPEGKRSWQ 515


>gi|116250771|ref|YP_766609.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255419|emb|CAK06495.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 514

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 174/483 (36%), Positives = 271/483 (56%), Gaps = 27/483 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+YI+T+I Y NA PH+G A E++ AD  AR  RL G D+ F  GTD++  K  ++A+ A
Sbjct: 3   KIYITTSIPYVNAAPHVGFALELVQADAYARHFRLLGHDIRFQCGTDDNSLKNVRSAEAA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCY 124
           GV  K FVD N+  F  +  +LDIS ++F+RT+    H  C   LW+  + KGD+Y+  Y
Sbjct: 63  GVQVKDFVDANAYRFEHLGGLLDISNEEFVRTSHDPRHIACVHALWRACAGKGDLYRKAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y   E+  G   ++  A    ++ + EE +FFRLS Y D+L+   E+  
Sbjct: 123 EGLYCVGCEQFYEPSELDDGRCPEHGIA----LETIREENWFFRLSRYGDRLIELIETGE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             I+P  RRNE+++ ++ GL D+S+SR   +   WG+ IPD  + ++YVW DAL NYLT 
Sbjct: 179 LRIVPAHRRNEILALLRRGLTDISVSRSAERARGWGVPIPDGDE-VVYVWFDALANYLTG 237

Query: 242 TGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+  + +    ++W     +HV+GK I +FHAIYWPA LLSA LP P  +  HG++   
Sbjct: 238 LGHGSD-ETLLQRYWNDGQRIHVVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVTVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G KI KS GN IDP  +I+  G  DALRY+L+R I  G DG +  + L+   + +LA  +
Sbjct: 297 GRKIGKSAGNGIDPERIIQTYGTPDALRYYLLRHIRSGDDGDFSAERLEAAWSGELAGQL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL +R ++++   + G++P        D + +   +R+  ++ E      +H  LA + 
Sbjct: 357 GNLANRVLALLSTSFGGIVP-----PVPDSAFVDEAARLPGKVAEAFDAYELHVGLADIF 411

Query: 419 SLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQ---LAILLQAFVPKL 469
           + + E +R F    PW   K      T  DR +T   ++  +  Q   LA++ +  +P L
Sbjct: 412 AFIGEANRRFTKGAPWADAKALLADLTPEDRRATAARLSACLAEQVYGLAVVARCLLPFL 471

Query: 470 ANK 472
            + 
Sbjct: 472 PSS 474


>gi|78779318|ref|YP_397430.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78712817|gb|ABB49994.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 511

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 176/458 (38%), Positives = 256/458 (55%), Gaps = 20/458 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   G+ 
Sbjct: 5   ITTPLYYVNDKPHLGSVYTTIICDSIARYKRLVGEDVIFITGVDEHGLKIQRTANEKGIE 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K   D+ S  F       +IS+D FIRT+ K H       ++++    DIY G   GWY
Sbjct: 65  PKSHCDEISEVFNINWKNWNISFDKFIRTSSKNHEFVVNEFYERVKSSDDIYMGVQKGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  E + ++ E        Y    H   ++W  EE  FFRLS YQ K +    + P FI
Sbjct: 125 CVGCEEFKDNPE----NSSTYKCPIHQKNLEWKNEENLFFRLSKYQ-KEIEKIINEPSFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
            PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     D 
Sbjct: 180 EPIERKNEIINFVSRGLKDFSISRTNVSWGIPVPGYDNHTFYVWFDALLGYVSAISS-DT 238

Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            D S  +     WPAD+H+IGKDILRFHA+YWPA L+SAN+ +PKKVF HGF+  +G+K+
Sbjct: 239 SDNSLERSINGGWPADVHLIGKDILRFHAVYWPAMLISANMKVPKKVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL++
Sbjct: 299 GKSLGNVLDPDLLLSKYGNDPVRWYLIKDISLGNDGDFQHKRFVDIINNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR---ALAQVISL 420
           R+ SM  K +   +P        ++  L   +++   ++  + N  I++   A  +V+SL
Sbjct: 359 RTSSMSRKWFGNKVPNNENIINENK--LENYAKI--SVKNYIHNFDIYKLDLAANEVLSL 414

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIR 456
               + Y +  +PW L K   N      ++Y  +E  R
Sbjct: 415 AINTNLYLNDNQPWMLIKEIDNLPLVKEIIYNVLESTR 452


>gi|254583406|ref|XP_002497271.1| ZYRO0F01716p [Zygosaccharomyces rouxii]
 gi|238940164|emb|CAR28338.1| ZYRO0F01716p [Zygosaccharomyces rouxii]
          Length = 552

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 180/516 (34%), Positives = 283/516 (54%), Gaps = 36/516 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ R   +++T I YPNA+PH+GH Y  +I DV  R+  L G + LFTTGTDEHG KI  
Sbjct: 8   IQRRLVSHVTTPIFYPNAKPHLGHLYSSLICDVFHRWKTLQGEENLFTTGTDEHGLKIQL 67

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A++  G    K FVD+   +F  +    ++++  FIRTT+  H +  R LW      G I
Sbjct: 68  ASERNGFQNPKQFVDKLYDDFITLDKAFNVNFTRFIRTTDTDHINNVRKLWNLCDKNGFI 127

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKL 176
           Y+G + GWYS+ DE +Y + +V +     G+Y N + +N V +  E+ +FF+LS + D+L
Sbjct: 128 YQGEHKGWYSISDETFYPESKVIEDPVNTGKYLNTETNNEVVYHSEKNHFFKLSHFNDQL 187

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTF--DWGIKIPDDPQYIMYVWID 233
           + Y ES+P+FI P  +R ++++ +++  L+DLS+SR +F   WGI +P DP   MYVW D
Sbjct: 188 IDYIESNPQFIYPEVKRVQILNELRNNRLQDLSISRPSFRLKWGIDVPGDPSQKMYVWFD 247

Query: 234 ALTNYLTTTGYLD-----NPDG----------SKAKFWPADLHVIGKDILRFHAIYWPAF 278
           AL NYLT+ G +D      P            S   +W    HVIGKDI+RFH IYWP+F
Sbjct: 248 ALCNYLTSIGGIDAIMNNEPHTKLLHTRKEIQSPRDWWSNTTHVIGKDIIRFHTIYWPSF 307

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L++A LPLP++V  H   +  G K+SKSLGNV+DP+ + +  G D +R+FL+      +D
Sbjct: 308 LMAAGLPLPRQVVVHSHWICNGMKMSKSLGNVVDPLLMKKHYGEDPMRWFLLENSQLEED 367

Query: 339 GFYDKDGLKKRVNADLANGIGNLVS----------RSVSMILKDYDGMIPTPGAFTESDE 388
           G + +  L   +    A+  GNLV+          R+V       + ++           
Sbjct: 368 GDFQESKLFS-LTEMFASKWGNLVNRCCGPKFNLQRAVQFYSDGRNPLLVNDDNLQAEVN 426

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +++   S +   + + M N     AL  V S++++ + +    +PW      P     ++
Sbjct: 427 NLVKKLSNIPISMDKKMNNFQTASALRDVWSIINDTNAFMQNAEPW---TKGPAEQDAII 483

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++ +E  R L+IL Q  +P LA K+ D + V  +NR
Sbjct: 484 FLCMETSRILSILCQPIIPDLAAKLLDRIDVEKDNR 519


>gi|33865756|ref|NP_897315.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|33632926|emb|CAE07737.1| putative methionyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 514

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/458 (37%), Positives = 245/458 (53%), Gaps = 19/458 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G  Y  +  D LARF RL+G  V+F TG DEHGQKI + A+   ++
Sbjct: 5   LTTPLYYVNDRPHLGSTYTTLACDALARFQRLNGKAVVFITGVDEHGQKIQRTAEARQLS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D  S ++RD+     IS D F+RTT+ RH       + ++   GD+  G  +GWY
Sbjct: 65  PQQHCDAISGSYRDLWSRWGISQDRFVRTTDPRHLQLVDQFFARVKGSGDVISGRQTGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D      A          P++W +EE  FFRLS YQ ++     +  +FI 
Sbjct: 125 CVGCEEYKDDS---AEAVDPSCPIHQKPLEWRDEENLFFRLSHYQSQIEELV-ARDDFIQ 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR EV +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT    LD  
Sbjct: 181 PANRRQEVRNFVAQGLRDFSISRVNVSWGLPVPGHEGHTFYVWFDALLGYLTA--LLD-- 236

Query: 249 DGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           DG            WPA +HVIGKDILRFHA++WPA L+SA LPLPK VF HGF+  +G 
Sbjct: 237 DGGPVALERLEQCGWPASVHVIGKDILRFHAVFWPAMLMSAGLPLPKTVFGHGFLTREGL 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL
Sbjct: 297 KMGKSLGNVLDPERLLERCGSDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ SM  K +   +P           +    +  +  +  +M +     A   V+ L 
Sbjct: 357 LNRTSSMARKWFADAVPPHTDAVGPHHPLAVAANTAVTTVLTSMPSLGFKPAAEAVLQLA 416

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIR 456
              + + +   PW   K  P + + V   LY  +E  R
Sbjct: 417 IAANGHLNDTAPWSRMK-QPGKEAEVGDDLYAVLEATR 453


>gi|322801003|gb|EFZ21784.1| hypothetical protein SINV_04670 [Solenopsis invicta]
          Length = 612

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/534 (34%), Positives = 278/534 (52%), Gaps = 60/534 (11%)

Query: 8   YISTAIAYPNAQ----------------PHIGHAYEMIIADVLARFHRLDGLDVLFTTGT 51
           YI+T I Y NA                 PHIGH Y  ++AD +AR++ + G  + FTTGT
Sbjct: 53  YITTPIFYVNAGTLSYYNRKVKYIFLLGPHIGHLYSAVLADAVARYNNMLGHKIFFTTGT 112

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW- 110
           DEHG KI  AA  AG+    +  Q S+ F++M D  ++ Y  FIRTTEKRH D     W 
Sbjct: 113 DEHGNKIKTAAAAAGLPNLEYCTQISQQFKEMCDRFEVDYSRFIRTTEKRHCDAVYHFWV 172

Query: 111 -------------------KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG---- 147
                              K++ +KG IY G YSGWY + DEA+ +D ++ +  D     
Sbjct: 173 LRTNLFLTSTSFAISCVTHKRLEEKGHIYLGKYSGWYCVSDEAFLSDADLIEQKDSTGKI 232

Query: 148 -QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--L 204
            +      N V+W EEE Y FRLSA+QD L  Y+      + P      +  +V+ G  L
Sbjct: 233 IKVSAESGNTVEWTEEENYKFRLSAFQDDL-KYWLKDENTVKPALYHKTLSQWVEEGVCL 291

Query: 205 KDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           +DLS++R      W +  P D  + +YVW+DAL NYLT  GY   P+ S  +FWP ++ V
Sbjct: 292 QDLSITRLRNKVPWAMPSPCDESHSIYVWMDALINYLTVLGY---PNESYKEFWPPNIQV 348

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDIL+FH IYWPAFL++A L  PK +  H       +K+SKS+GNVI P +   +   
Sbjct: 349 IGKDILKFHGIYWPAFLIAAGLEPPKTLLCHAHWTVDHKKMSKSIGNVISPFKAANDYSE 408

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           + LRYF++RE     D  Y    +   +N++LA+ +GNLVSR     +       P P  
Sbjct: 409 EGLRYFILREAVPQNDANYSSKKIVNILNSELADTLGNLVSRCAGKAVNP-SKEFPDPAK 467

Query: 383 FTESDESILSVCSR-----VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           +    +S ++  +R     V ++ R++ +   +H  +  VIS++   ++     +PW+L+
Sbjct: 468 YWNVLQSQVADETREALKSVGEKARKSYEEYNLHHVVDAVISMLHCANKMVAYHEPWQLR 527

Query: 438 KTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           K   D  S      V+ + +E  R  A++L   +P+L++ + D L +  ENR +
Sbjct: 528 KQVDDANSIEELKAVISLALESSRIGALILYPIIPRLSSSLLDFLNIPKENRMW 581


>gi|307946518|ref|ZP_07661853.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770182|gb|EFO29408.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 510

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 178/509 (34%), Positives = 274/509 (53%), Gaps = 11/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  I+AD++ R     G +++ +TG DEHGQK  +AA   
Sbjct: 2   KSYITTPIYYVNGSPHIGHAYTSIVADIMKRNRTALGYEMMLSTGVDEHGQKNQEAAAAL 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    ++D   + FR++ D+ D+ YD F+RT+   H      + + I DK  I K  Y+
Sbjct: 62  GMDAAAYLDMRCKEFREVFDLFDVDYDYFVRTSRDGHKQAVAAMEQTIFDKDLIVKKEYT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  D ++ +  DG+        ++  +E  YF ++  ++++LL + E +P+
Sbjct: 122 GKYCKGCEEFKRDTDLTE--DGKCALHPTMEIEESKEVNYFLKMEPFRERLLQHIEDNPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           F+ P   RNE+   +   L+DL +SR       G+ +P DP ++ YVW DAL NYLT   
Sbjct: 180 FVQPKAFRNELKQMLSEPLEDLCISRPKARVTLGVNLPFDPDFVTYVWFDALANYLTNIN 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-FILHKGEK 302
           +   PDG  + +W    H+IGKDIL+ H +YWP  L++A LPLPKK+  H  +    G K
Sbjct: 240 W---PDGDYSAWWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWTGEGGVK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP EV++ +GVDALR++L R +    D     + +++  N +L N IGNL+
Sbjct: 297 MSKSIGNVVDPNEVMDLMGVDALRWYLARHMRADSDSQISVELIRQTYNGELGNKIGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR      K++DG +PTPGA +  DE++            E +    I   +  ++S   
Sbjct: 357 SRVAKFSNKNFDGKVPTPGALSAEDEALRKQVLEATSGFGEWINMPDIPARIQALVSAAD 416

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++ Y D Q PW L K     +R +TVLYV ++  R L   L   +P  A K   +L V 
Sbjct: 417 AMNEYIDQQAPWSLFKNEETRERCATVLYVALDCQRILFEALMQVIPASATKALAMLNVP 476

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                +++   +L PG         +FPR
Sbjct: 477 APAAPWKAELDKL-PGGNTLGELTSLFPR 504


>gi|74005480|ref|XP_850573.1| PREDICTED: similar to methionine-tRNA synthetase 2 precursor [Canis
           familiaris]
          Length = 593

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 179/511 (35%), Positives = 270/511 (52%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DGLDVLFTTGTDEHGQKIAKAA 62
           + + +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 44  RAFFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSAAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     +S  DF+RTTE RH    +  W  +  +G +YKG
Sbjct: 104 AAAGLAPAELCDRVSAQFQQLFREAGVSSTDFVRTTEARHRVAVQHFWGLLEARGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   +E +  + +V +  G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASEECFLPEAKVTRQPGPSGDACPVSLESGHPVSWTKEENYIFRLSQFREPLR 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P+ + P   R  V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRDDPQAVTPEPFRLAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P+     +WPA  H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVIGY---PNAEFRAWWPATSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPKTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKD--------YDGMIPTPGAFTES------DESILSVCSRVLQEI 401
           + +G L++R  +  +           +   P PG    S      D ++++  + + +++
Sbjct: 401 DALGGLLNRCTANRINPSGTYPVFCANCFPPAPGVAGPSARAQAEDYALVNAVATLPRQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            E+  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 AEHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLSWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P LA+K+   L V+   R    L
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSATERGLGEL 551


>gi|241956003|ref|XP_002420722.1| mitochondrial methionyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
 gi|223644064|emb|CAX41807.1| mitochondrial methionyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
          Length = 577

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 194/545 (35%), Positives = 298/545 (54%), Gaps = 53/545 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K  VD+ S+NF  +A+  +++YD FIRTT+  H D  R  W  + ++G IY
Sbjct: 75  TAEKLGLEPKTLVDKVSQNFSKLAEQFNVNYDRFIRTTDDDHIDLVRYFWNLMMERGFIY 134

Query: 121 KGCYSGWYSLRDEAYYND---DEVYK-GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ +   +EV K G   +  +   N V + EE  YFF+LS +Q +L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKVVKISSETKNEVVYQEETNYFFKLSLFQKQL 194

Query: 177 LSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++  ++ + L DLS+SR +    W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPTHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDNTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +  + +   +K+       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATEFPQDFEVKDSKYITPENSIWPA-THVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGNV+DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR------SVSMILKDYDG--------MIPTPGAFTESDESILS 392
           ++  +A L     NL+SR      S+   +K   G        +I T     +S + +LS
Sbjct: 374 QRSRDAVLGK-YCNLISRIGGKNFSIEEAVKSCAGGEFNNIREIIETCTINKDSVDGLLS 432

Query: 393 VCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPWELKK--TNPD 442
             S++  ++ + + NQ+ H        RA+    S++++ ++ F   +PW   K   +PD
Sbjct: 433 SSSKLTTDLND-LYNQMDHYFTNFEYIRAIQSWWSVINQANQIFQNAEPWTYVKLINSPD 491

Query: 443 RASTV-----------LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             + +           +Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +L  
Sbjct: 492 TPAELKEKYRVLTNYFVYLCGETARISSILIQPVMPQLSKKILDRLDVSGRTSDFATLGA 551

Query: 492 RLKPG 496
            LK G
Sbjct: 552 DLKYG 556


>gi|241203365|ref|YP_002974461.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857255|gb|ACS54922.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 514

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 176/492 (35%), Positives = 273/492 (55%), Gaps = 30/492 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +YI+T+I Y NA PH+G A E++ AD  AR  RL G DV F  GTD++  K  ++A+ AG
Sbjct: 4   IYITTSIPYVNAAPHVGFALELVQADAYARHFRLLGQDVRFQCGTDDNSLKNVRSAEAAG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYS 125
           +  K FVD N+  F  +  +LDIS ++F+RT+    H  C   LW+  +  GD+Y+  Y 
Sbjct: 64  LPVKDFVDANADRFERLGGLLDISNEEFVRTSRDPRHIACVHALWRACAGHGDLYRKAYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E +Y   E+  G   ++  A    ++ + EE +FFRLS Y D+L+   ES   
Sbjct: 124 GLYCVGCEQFYEPSELDDGRCPEHGIA----LETIREENWFFRLSRYGDRLIELVESGEL 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            I+P  RRNEV++ ++ GL D+S+SR   +   WG+ +PD+ + ++YVW DAL NYLT  
Sbjct: 180 RIVPAHRRNEVLALLRRGLTDISVSRSAERARGWGVPVPDEDE-VVYVWFDALANYLTGL 238

Query: 243 GYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +  + +    ++W     +HV+GK I +FHAIYWPA LLSA LP P  +  HG++   G
Sbjct: 239 SHGSD-ETLLPRYWNGGQRIHVVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVTVDG 297

Query: 301 EKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           +KI KS GN IDP  +I+     DALRY+L+R I    DG +  + L+   + +LA  +G
Sbjct: 298 KKIGKSAGNGIDPERIIQSYATPDALRYYLLRHIRSADDGDFSAERLEAAWSGELAGQLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL +R ++++   +DG++P        D + +   +R+  ++ E      +H  LA + +
Sbjct: 358 NLANRVLALLSTSFDGIVP-----PVPDSAFVEEAARLPAKVAEAFDAYELHVGLADIFA 412

Query: 420 LVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTVEVIRQ---LAIL---LQAFVP 467
            + E +R F  + PW   K      T  DR +T   +   +  Q   LAI+   L  F+P
Sbjct: 413 FIGEANRRFTKRAPWADAKALLADLTPEDRKATAARLGSSLAEQVYGLAIIARCLLPFLP 472

Query: 468 KLANKIFDILFV 479
             A K+   L +
Sbjct: 473 SSATKLHSRLGI 484


>gi|322706456|gb|EFY98036.1| methionyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 589

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 186/523 (35%), Positives = 274/523 (52%), Gaps = 43/523 (8%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ADVL R+ ++ G +  F TGTDEHG KI +AA   G+  K F D  S  FR++A   
Sbjct: 1   MVLADVLKRWQQIKGKETFFLTGTDEHGMKIQRAAAKEGIAPKEFCDNYSNKFRELAAAG 60

Query: 88  DISYDDFIRTTEKRHHDTCR----ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-- 141
           DIS+D FIRTT+  H +        L   + +   +YKG + GWY++ DE +Y +D V  
Sbjct: 61  DISHDAFIRTTDLEHKEAVSEFLLQLKHTLPEHLGLYKGTHEGWYAVSDECFYPEDLVRP 120

Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G      +   + V+W++EE +FF L+ Y+D LL +Y+ +P +I P  R NEV 
Sbjct: 121 DIVPQTGKKIMVSDETGSEVEWVKEETWFFPLTKYKDALLKFYDENPNWITPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KA 253
           ++V++ L+DLS++R      WGI  P+D    +YVW+DAL NY+T  GY      S    
Sbjct: 181 NWVENHLEDLSITRPAARLSWGIPDPEDRSQTIYVWVDALINYITQAGYGRKWHSSSDNM 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPADL +IGKDILRFHAIYWPA L++ NLPLPK++  H        K+SKSLGNV++P
Sbjct: 241 GLWPADLQIIGKDILRFHAIYWPALLMALNLPLPKQLLCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR----SVSMI 369
              ++   +D LRYFL+R  +  KD  Y    +      +L   IGNL+ R     V+  
Sbjct: 301 FFAVQRWDIDPLRYFLMRNGSFTKDMSYSNQLIGSVYAKELQANIGNLLYRIARPKVTSK 360

Query: 370 LKDYDGMIP-TPGAFTE-----SDESILSV---CSRVLQEIRENMQNQLIHRALAQVISL 420
               + +     GAF E     S +  +S+     ++     E M+      A+ +V +L
Sbjct: 361 WSTLEAVTAFRQGAFEEIPDHTSQQPFVSLDDHLEKIPSAYYEEMEKYNTGGAIREVFNL 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVL-----YVTVEVIRQLAILLQAFVPKLANKIFD 475
           + E +RY    +PW L K NP+  S +L     Y   E +R   ILLQ  +P  A+ + +
Sbjct: 421 LRETNRYVSDTEPWNLVK-NPNPQSRILLNLVIYNCAEALRIAGILLQPIMPTKASLLLN 479

Query: 476 ILFVADENRCFQSLDQRLKPGFMLH----------KTFDPIFP 508
            L V ++ R  +   +   P +             K +D IFP
Sbjct: 480 ELGVREDRRTLEFASKGKDPEYGTEAQTGDSAARLKKWDTIFP 522


>gi|255711230|ref|XP_002551898.1| KLTH0B02486p [Lachancea thermotolerans]
 gi|238933276|emb|CAR21460.1| KLTH0B02486p [Lachancea thermotolerans]
          Length = 621

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 186/529 (35%), Positives = 285/529 (53%), Gaps = 55/529 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I+T I YPNA+PH+GH Y  ++ DV  R+  + G + LFTTGTDEHG KI  A++  G
Sbjct: 62  FHITTPIFYPNARPHLGHLYSSLLCDVTKRWRAMQGYNTLFTTGTDEHGLKIQNASEKNG 121

Query: 67  VTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  K FVD   R F  +  + +ISY  FIRTT+  H    R LW +  + G IYKG + 
Sbjct: 122 YSNPKQFVDVLYREFVKLDQMANISYTRFIRTTDYDHVRAVRELWNRCWESGYIYKGEHE 181

Query: 126 GWYSLRDEAYYNDDEVYK---------------GADGQYYNAQ-HNPVQWMEEEGYFFRL 169
           GWYS+ DE +Y + +V +                 DG++ N +  N V +  E  YFF+L
Sbjct: 182 GWYSISDECFYPESKVVQLQGDGQELPFGSPEIRKDGKFINTETRNGVVYHSETNYFFKL 241

Query: 170 SAYQDKLLSYYE-SHPEFILPIERRNEVISFVK-SGLKDLSLSRKT--FDWGIKIPDDPQ 225
           S++Q++LL++ E  +P FI P  RR+++I+ ++ S L+DLS+SR +    WGI +P DP 
Sbjct: 242 SSFQNRLLTFLEKENPHFISPPSRRDQIINELRGSKLRDLSISRPSSRIKWGIDVPQDPS 301

Query: 226 YIMYVWIDALTNYLTTTG----YLDNPDGS-----------KAKFWPADLHVIGKDILRF 270
             +YVW DAL NYLT+ G     LDN   +              +W    H+IGKDI +F
Sbjct: 302 QKIYVWFDALCNYLTSVGGLQAVLDNSPAAVKHTITSQLKMPRNWWVNTTHIIGKDIAKF 361

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HAIYWP FL++A +PLPK++  HG  L  G K+SKS+GNV+DP+++I     D +R++L+
Sbjct: 362 HAIYWPCFLMAAGIPLPKQIIVHGHWLSGGVKMSKSVGNVVDPLDMILHYECDPVRWYLL 421

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS------MILKDYDGMIPTPG--- 381
                  DG + ++ L       + +  GNL++R  S        ++ +      P    
Sbjct: 422 ENSHIEADGDFREERLHA-TREQIVSKWGNLLNRCCSNKFNIPRAVETFASQAANPENNA 480

Query: 382 ---AFTESDESILSVCS--RVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWE 435
                TE+ ES   +    + L E+  +   QL  R AL  +  ++ + + +     PW 
Sbjct: 481 ATLIGTEAQESYRELIQLLQTLPELFSSHMRQLETRSALKLLWDVIGKANAFVQTSTPW- 539

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           LK    +    +++  +EV+R  +IL Q  +P L+N + D + V  ENR
Sbjct: 540 LKSG--EEQDLIIFTAIEVVRITSILAQPIMPTLSNALLDRIGVDTENR 586


>gi|45184691|ref|NP_982409.1| AAL133Wp [Ashbya gossypii ATCC 10895]
 gi|44980037|gb|AAS50233.1| AAL133Wp [Ashbya gossypii ATCC 10895]
          Length = 567

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 190/533 (35%), Positives = 286/533 (53%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++  +K +I+T I YPNA+PH+GH Y  +I DV AR+ +L   +VLFTTGTDEHG KI  
Sbjct: 9   LRAIQKFHITTPIFYPNAKPHLGHLYSSLICDVQARWQKLRDSEVLFTTGTDEHGLKIQT 68

Query: 61  AAQNAG-VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A++  G  + KVFVD+   +F  + +  +I Y  FIRTT+K H      LW+     G I
Sbjct: 69  ASEQQGYASPKVFVDKLCTHFISLDEQANIGYTRFIRTTDKDHISNVLRLWELCKANGYI 128

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADG---------------QYYNAQ-HNPVQWMEEE 163
           YKG +SGWYS+ DE +Y   +V +  DG               +Y N +  N V    E 
Sbjct: 129 YKGEHSGWYSVSDETFYPATKVVQVIDGREFPVMDGSTVTEGAEYINTETRNRVIHQTEV 188

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSR-KT-FDWGIKI 220
            YFFRLS+++++L+S+ + +P FILP  R  +++  + K+ L DLS+SR KT   WGI +
Sbjct: 189 NYFFRLSSFRERLISHLKENPGFILPPSRSAQILDLLLKAELPDLSISRPKTRLKWGISV 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLD------------------NPDGSKAKFWPADLHV 262
           P D    +YVW DAL NY+T+ G +D                  +  GS  ++W A  H+
Sbjct: 249 PGDESQKIYVWFDALCNYVTSIGGVDAVLEDRPIANLVHSIPQGSVSGSSKEWWNATTHL 308

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +GKDI++FH IYWPA LL+A LPLP+KV  HG  L  G K+SKSLGNV+ P E+IE+   
Sbjct: 309 VGKDIVKFHTIYWPAILLAAGLPLPEKVVVHGHWLSDGVKMSKSLGNVVVPEEMIEKYDT 368

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----I 377
           D +R+F++       D  + ++GL +     L +  GNL+ R        +  +      
Sbjct: 369 DPMRWFILEHDTIEHDASFSEEGLCQ-TRELLCSKWGNLLHRCGGPKFNIHRAVQKFHHK 427

Query: 378 PTPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           P       + E   ++LS  + +  EI + +       AL  + S++++ +      +PW
Sbjct: 428 PITDLTKNNPELYGNLLSRLTTLADEIDQLLSKYDTANALRLIWSIINDANMVVQHGEPW 487

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
              K   +    ++Y  VE  R ++I  Q F+P LAN+  D L V  + R  +
Sbjct: 488 ---KKPLEEQDLIIYTAVEAARIVSIAAQPFIPVLANRFLDRLDVHFDKRSLE 537


>gi|30962531|dbj|BAC76732.1| methionyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
          Length = 500

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 179/486 (36%), Positives = 272/486 (55%), Gaps = 26/486 (5%)

Query: 19  QPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           +PHIGHAY  ++ DV  R++RL   G    F+ GTDEHG KI +AA  A  T K F D+ 
Sbjct: 1   EPHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQAALAAKSTPKQFCDRV 60

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136
           S  F D+   L++S+ +FIRTT+  H +  +  W KI D G IYK  YSG+YS+ DE + 
Sbjct: 61  SSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSITDECFI 120

Query: 137 NDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            +++V K     GA+     +   PV+W+EEE Y FRLS +++K+  +       + P +
Sbjct: 121 PEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKVAEWINRENIVVHPSK 180

Query: 192 RRN-EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
            ++  + S   S    +S SR    WGI +P+DP   +YVW+DAL NYLT TG+   P+ 
Sbjct: 181 YKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDALVNYLTVTGF---PNA 237

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
                WP    VIGKDI +FH  YWPAFL++A L LP+KVF HG  L    K+SKSLGNV
Sbjct: 238 QSV--WPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGHWLIDNVKMSKSLGNV 295

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMI 369
           ++P E I +   + LRYFL++      D  ++ +   + +N+DL N +GNL++RS V  I
Sbjct: 296 VNPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSCLQTINSDLVNNVGNLLNRSTVEKI 355

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-------IHRALAQVISLVS 422
            K  +GM P      + +  I     ++++ + E+ +N +         + +  ++  + 
Sbjct: 356 NK--EGMYPK-MEIEDIEAEIRENAKKLMEMVEESRENCVDLYDEMSYFKIIENLMLTMK 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +R F + +PW  K+ +  R  ++L+VT + IR + ILLQ   PK+A    + L V   
Sbjct: 413 EANRLFQSSQPW--KEIDEKRLKSLLFVTYDTIRVVTILLQPITPKMAEFCLNRLGVPKN 470

Query: 483 NRCFQS 488
            R  ++
Sbjct: 471 ERNLEN 476


>gi|156844126|ref|XP_001645127.1| hypothetical protein Kpol_538p29 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115784|gb|EDO17269.1| hypothetical protein Kpol_538p29 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 570

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/523 (33%), Positives = 294/523 (56%), Gaps = 47/523 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I YPNA+PH+GH Y  ++ DV  R+    G   LFTTGTDEHG KI  A+Q AG 
Sbjct: 21  HVTTPIFYPNAKPHLGHLYSSLLCDVQHRWQLAKGNQSLFTTGTDEHGIKIQTASQKAGF 80

Query: 68  T-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  + FV+     F  +    DI +  FIRTT++ H +  ++LWK   D G IYKG + G
Sbjct: 81  SDPREFVNTLYPEFIKLNKNCDIEFTRFIRTTDQDHIENVKVLWKTCWDNGYIYKGEHKG 140

Query: 127 WYSLRDEAYYNDDEVYKGAD--GQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WYS+ DE +Y + +V K  +  G+Y N + +N V    E  YFF+LSA++++L+ Y E H
Sbjct: 141 WYSISDETFYPESKVIKDPNNPGKYINTETNNEVVHQSESNYFFKLSAFRERLIDYIEKH 200

Query: 184 PEFILPIERRNEVISFVKS--GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           P++I P  +++++++ +KS  G++DLS+SR     +WGI++P+DP   +YVW DAL NY+
Sbjct: 201 PQYIYPKSKKDQILNELKSSTGMQDLSISRPVSRLEWGIEVPNDPDQKIYVWFDALCNYM 260

Query: 240 TTTGYLDN-----PDGSK--------------AKFWPADLHVIGKDILRFHAIYWPAFLL 280
           ++ G +++     P  S+               + W    HVIGKDI++FH IYWP+FL+
Sbjct: 261 SSLGNIESIRNNIPVTSQHNLGGVNNVELKEPLELWKNTTHVIGKDIIKFHTIYWPSFLM 320

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +A+LP+ K+V  H   L  G K+SKSLGNV+DPI+++E  G D+LR+FL+      +DG 
Sbjct: 321 AASLPINKQVIVHSHWLCNGVKMSKSLGNVLDPIQMVEYYGADSLRWFLLENSQLEEDGD 380

Query: 341 YDKDGLKKRVNADLANGIGNLVSR------SVSMILKDYDGMIPTPGAFTE--SDESILS 392
           + +D L   +     +  GNL++R      ++   + ++        +  +   DE  + 
Sbjct: 381 FQEDKL-FMIRDMFVSKWGNLINRCCGTKFNIKRAVDEFSSKADVESSILQLFEDEQDMK 439

Query: 393 V-CSRVLQEIRE--NMQNQLIHR-----ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           +    + + ++E  N+ ++ I++      L  + S++S+ +      KPW  +    D  
Sbjct: 440 IQIENIFKNLKELPNLMDEKINKFEFAQLLRNIWSILSDANTLMQDAKPWTREGIKQD-- 497

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             +++   E  R L+IL    +P+L+    + + V  E + ++
Sbjct: 498 -AIIFTCTETSRILSILCAPLIPRLSISFLNRIDVPKECQTYK 539


>gi|320100795|ref|YP_004176387.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753147|gb|ADV64905.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 514

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 181/476 (38%), Positives = 272/476 (57%), Gaps = 17/476 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E    Y++T I YPNA PHIGHAY  + ADVLARF+RL G +V F TG DEHG KI + A
Sbjct: 5   EMNVFYVTTPIYYPNAPPHIGHAYTSVFADVLARFNRLIGNNVFFLTGNDEHGLKIQRVA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG   K FVD+ +  +R+    L ISYD FIRTT+  H    +  +  I  KG IYK 
Sbjct: 65  EKAGKHPKEFVDEMASVYREYWRTLGISYDHFIRTTDPYHEKAVKEAFSYIHGKGLIYKA 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSG Y +  E YY+  E Y   DG+ +   HN P++++EEE Y+F+LS ++D LL   E
Sbjct: 125 KYSGMYCVDCEKYYSPGE-YIEVDGKPHCPIHNKPLEYLEEETYYFKLSEFKDYLLDILE 183

Query: 182 SHPEFILPIERRNEVISFVKS-GLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +  + + P +   EV S +++ GL+D+S++R  +   WGI +P D +Y++YVW DAL NY
Sbjct: 184 NK-DVVYPQQYAREVASKIRNEGLRDVSVARPVERVGWGIPVPFDDKYVIYVWFDALMNY 242

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L+  GY D+ +  +  +W    HVIGKDIL FH   W + L + +LP P++V  H ++++
Sbjct: 243 LSGVGYPDDKERLQL-YWSNAHHVIGKDILWFHTAVWFSILKALDLPPPRRVIVHSYLIN 301

Query: 299 KGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           +G KI KS GNVI   E++    G D +RY L R     KD     + L    N++LA+ 
Sbjct: 302 RGLKIGKSAGNVISIEELVSRYNGSDGVRYLLARIFNTDKDSEVSFELLDSIYNSELADT 361

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNL  R  ++ +K  +G +         D+++  + +  +    ++M+N  + +AL   
Sbjct: 362 YGNLARRVGTLSMKKMNGKVYRRSV----DKAVADLVATHVGAYIDSMKNYEVSKALEHA 417

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + +    ++Y +  KPWE  K NP +    LY  +E+IR   ILL   +P  + K+
Sbjct: 418 MEIARYANQYVNESKPWE--KPNPSKE---LYTLLELIRAATILLHPVIPSASLKL 468


>gi|309808504|ref|ZP_07702403.1| methionine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168332|gb|EFO70451.1| methionine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 547

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/409 (39%), Positives = 246/409 (60%), Gaps = 18/409 (4%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRL 169
           +GDIY G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+
Sbjct: 4   QGDIYLGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRM 63

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           S Y D+LL YY+ +P+FILP  R  E+I+ F+K GL+DLS++R T DWGI +P DP++++
Sbjct: 64  SKYADRLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVV 123

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288
           YVWIDAL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK
Sbjct: 124 YVWIDALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPK 183

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++F HG++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +
Sbjct: 184 QIFGHGWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVE 243

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQN 407
           RVN DLAN +GNL++R++SMI +  DG++ P      E  + +  + +  +    E M  
Sbjct: 244 RVNFDLANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDA 303

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFV 466
               +AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  +
Sbjct: 304 LHFSKALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIM 363

Query: 467 PKLANKIFDILFVA--DENR---CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +    IF+ L ++  D N    C+ +   +      + K   PIFPR 
Sbjct: 364 TQSPVHIFEQLGLSLDDANAASLCWGAYGWK----NYVTKNPKPIFPRL 408


>gi|281207820|gb|EFA82000.1| methionyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 596

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 180/531 (33%), Positives = 284/531 (53%), Gaps = 35/531 (6%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y N  PHIGH Y  ++ D +AR++R     VL+ TGTDEHGQK+  AA+ A   
Sbjct: 69  ITTPIFYVNGTPHIGHLYTSVLGDAIARWNRFCNDKVLYMTGTDEHGQKVQDAAKKAQKD 128

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
             V+ D+ S  FR   D   ISYDD+IRTTE+RH +    +W K+   G IYKG Y GWY
Sbjct: 129 NIVYCDEISGVFRKSFDQFGISYDDYIRTTEQRHKNVVHDMWNKLDGNGLIYKGSYEGWY 188

Query: 129 SLRDEAYYNDDEVYKGAD-----------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            + DEA+  +D+V  G              +      NP +W+ E  Y F+L+ +   + 
Sbjct: 189 CVSDEAFLTNDQVQDGMSPVTPQNPVSKPCKLSIESGNPCEWVSESNYMFKLTDFLKPID 248

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
           ++   +P  + P     +  S++   LKDLS+SR +    WGI++P+D    +YVW+DAL
Sbjct: 249 NWLSKNP--LYPESWNLQARSYLPH-LKDLSVSRPSSRLPWGIRVPNDESQSIYVWLDAL 305

Query: 236 TNYLTTTGYLD--NPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           TNYLT  G     + DG+   +   D+ HVIGKDIL+FH+IYWPAFLL   L LP  + +
Sbjct: 306 TNYLTVAGGFKARSADGTDIAWNHTDVTHVIGKDILKFHSIYWPAFLLGTGLKLPHSIVT 365

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H     +  K+SKS GNVI P ++ E+ G++ +RYFL++      DG +    ++ R+ A
Sbjct: 366 HAHWTVERVKMSKSRGNVISPFDIAEKYGIEGVRYFLLKGGGLENDGDWSDLEVRSRITA 425

Query: 353 DLANGIGNLVSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQ---EIRENMQ 406
           DLA+  GNLV+R  +  L   + +   +    A T  + + L +  ++ Q    + ++ +
Sbjct: 426 DLADTFGNLVTRCTAKALHPSRAWPTCLSQTFAATAQEPNSLRIIEQMQQLVSLVNQHYK 485

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWEL------KKTNPDRASTVLYVTVEVIRQLAI 460
              I   + +VI+     + + +  KPW L      +  +  R + ++Y+ +E IR +A+
Sbjct: 486 CGDIKSGIYEVINFTYATNNFVEQTKPWTLVPKPGKQAGDLMRLNDIMYILLECIRTIAL 545

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           LL   +P+ + K  D + V + +R        ++ G+   +T  P+ P  L
Sbjct: 546 LLSPVIPESSKKTLDHIGVDETHRNI----NHIQFGYDYPQTLVPMNPLIL 592


>gi|321250978|ref|XP_003191915.1| methionine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458383|gb|ADV20128.1| Methionine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 582

 Score =  306 bits (784), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 187/496 (37%), Positives = 280/496 (56%), Gaps = 25/496 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQN 64
            Y++T I Y NA PHIGH + +++ DVLARF RL      V+F TGTDEHG KI +AA+ 
Sbjct: 53  FYVTTPIFYVNASPHIGHLHSLLLTDVLARFSRLRCPQRKVVFATGTDEHGLKIQQAAKA 112

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + F D  S+ FR++A + + S  DFIRTTE RH       W  +   GDIYKG +
Sbjct: 113 NGVGEQEFCDDVSQRFRNLAKLANASNTDFIRTTEPRHVKAVEQFWNTLVGSGDIYKGTH 172

Query: 125 SGWYSLRDEAYYNDDEVYK-GADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           SGWYS+ DE++Y   +V K   DG+    +  N V W EE  + FRL  +++  L  + S
Sbjct: 173 SGWYSISDESFYAASQVTKRPEDGKMIAIETGNEVIWEEETNWKFRLGKHKE-FLEKWLS 231

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
            PE + P   R +++    S L+DLS+SR +    W I +P DP+  +YVW+DAL NY+T
Sbjct: 232 QPESVHPNTVRLDLLRQTSS-LEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     +   WPAD+HV+GKDI++FHA++WP+ L SA+L  PK++ +H       
Sbjct: 291 VLGYPDWQGKGERVGWPADVHVVGKDIIKFHALHWPSLLHSASLAAPKRIIAHAHWTMSH 350

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG--KDGFYDKDGLKKRVNADLANGI 358
            K+SKS GNV+DPI  + + G D +R++L+R I  G   D  Y+   ++ +    LA+ +
Sbjct: 351 AKMSKSRGNVVDPIAAMTQWGEDGVRWYLMR-IGGGLVDDADYNPAEVEVQYRL-LADQM 408

Query: 359 GNLVSR-SVSMILK----DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           GNL+SR S + +LK    ++D G   T     + DE +  + + + +E    M+   + +
Sbjct: 409 GNLLSRISGAKLLKKAKREFDWGDEKTGEKGKDRDEELDRMMAGMREEFEGKMEVFGVSQ 468

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLA 470
           A   V+ ++   ++ F +  PW     +P   S+V  +T     +R  AILLQ  +P  A
Sbjct: 469 ACGGVMDVIMATNKLFTSLAPW-----SPSTPSSVPALTYAYHALRLSAILLQPIIPAKA 523

Query: 471 NKIFDILFVADENRCF 486
            +  D L V  E R +
Sbjct: 524 EEALDRLGVPAEERSW 539


>gi|269114911|ref|YP_003302674.1| methionyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322536|emb|CAX37271.1| Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS)
           [Mycoplasma hominis ATCC 23114]
          Length = 521

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 173/472 (36%), Positives = 269/472 (56%), Gaps = 14/472 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGH     +A V   + +  G + LF TG DEHGQKI K A 
Sbjct: 5   KKTFYITTPIYYPSGNLHIGHLLTTTLASVYRNYKKQQGYETLFITGIDEHGQKIQKKAL 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T K +VD  S+ F D+  +L I YD +IRTT+  H +T + ++  +  KG IYK  
Sbjct: 65  EQNITPKEYVDIQSQKFVDLWKLLKIDYDKYIRTTDDYHIETIQKVFYLMEQKGYIYKSK 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G YS+ DE +    +     DG++Y+    + +Q ++EE YFF +S +   + SY+E 
Sbjct: 125 YEGLYSISDEEFLTKTQAI-SKDGKFYHPISGHELQEVKEESYFFNMSKFTPWIKSYFEQ 183

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNY 238
           +P+FI       E++ +F+  GL+DLS++R +FDWGIKI     + Q+I+YVW+DAL NY
Sbjct: 184 NPDFITNKATYKELMNNFINKGLEDLSITRVSFDWGIKIETKDAEKQHIIYVWLDALFNY 243

Query: 239 LTTTGYLDNPDGSK--AKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L+  GY +N  G +   KFW      +H++ K+I RFHAIYWP FL S +L LP K+  H
Sbjct: 244 LSALGY-NNYLGQELYNKFWVNGNERVHLLAKEISRFHAIYWPIFLKSLDLNLPTKLVIH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +I+    K+SKS GNVI+PI +IE+ G + ++YF   +I    D  + ++ L   +NAD
Sbjct: 303 SWIVTPEGKMSKSKGNVIEPIPLIEKYGAEPVKYFFASQINIDNDFSFSEELLINVLNAD 362

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN  GNL +R+  M++ ++ +G    P      D+++ S       + ++   N    +
Sbjct: 363 LANNFGNLANRTFKMVMLNFENGTTYCPNQLNSLDKNVYSEIENAYNDYKKYFDNFNADK 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           AL + I L   ++ Y D  +PW+LK+  P R + VL   +  I  + ++L  
Sbjct: 423 ALKRAIELSKFLNEYIDKNEPWKLKENLP-RLNVVLNTLLNGIYAVNMMLSV 473


>gi|328718436|ref|XP_001949836.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 527

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 276/493 (55%), Gaps = 20/493 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKI 58
           + ++   +I+T I Y NA PHIGH Y  +IAD  ARF +L    L+++F+TGTDEHG K+
Sbjct: 11  VTKKTSYFITTPIFYVNASPHIGHLYSALIADASARFQKLLNPSLNIIFSTGTDEHGLKV 70

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            KAA+N  ++ K +  + S +++   D  DIS+  FIRTT + H +     W K+  +  
Sbjct: 71  QKAAENCKISVKNYCTKISSSYQTTFDKFDISHTSFIRTTAENHKNCVHYFWSKL--QPH 128

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           I KG YSGWY   DE + + D++    + +        V+W EE+ Y F L  ++  L  
Sbjct: 129 IRKGKYSGWYCTADETFLSQDQIELVNNVRVSKESGRQVEWAEEDNYKFDLRPFKHDLQC 188

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236
           +  S P+ I P +  +E+++   + L D+SLSR      WGI +P D    +YVW+DAL 
Sbjct: 189 WL-SKPDRIKP-KVFHEILNREVNDLYDISLSRPKSRVSWGIPVPRDDTQTVYVWLDALV 246

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT +GY D      +K WP ++ V GKDIL+FH I WP FL++A L LPK++F H   
Sbjct: 247 NYLTVSGYPD------SKIWPPNVQVCGKDILKFHGILWPIFLIAAGLELPKQIFVHSHW 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
               EK+SK+ GNV+DPI    +     LRYFL+RE     DG Y    +K+ +NA+LA+
Sbjct: 301 KVNDEKMSKTKGNVVDPINAGCQYTESGLRYFLLREGTAHSDGNYSDLKIKRILNAELAD 360

Query: 357 GIGNLVSRSVSMILKDYDG-----MIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-I 410
            +GNL++R     +          ++       +S    LS    VL +I  +   +L  
Sbjct: 361 TLGNLLNRCCGKAINPNLSYPKLDLLQIERLLADSYFIELSKKLEVLADIVGSHYEELNF 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++ + ++I+ +   +R+F+  KPWEL K + ++   +L++T+E +R   + LQ  VP LA
Sbjct: 421 YKGIDEIIATLQCCNRFFEYNKPWELAKQDVNKLKCILHITMETLRISGLALQPIVPVLA 480

Query: 471 NKIFDILFVADEN 483
           +++ + L + + +
Sbjct: 481 DQLLNKLNINNRD 493


>gi|146418705|ref|XP_001485318.1| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 565

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 179/520 (34%), Positives = 282/520 (54%), Gaps = 43/520 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI++ I Y NA+PH+GH Y M + D  +R+ +L   +  F TGTDEHG KI   A+  G+
Sbjct: 17  YITSPIFYVNAKPHLGHLYSMHLCDTRSRWEKLKNKESFFVTGTDEHGLKIQAVAEKRGI 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K  VD+ S NF+ +A+  DI YD FIRTT+  H ++ +  WK ++++G IYKG +SGW
Sbjct: 77  SPKTLVDEVSLNFKHLAEKFDIQYDRFIRTTDGDHIESVKHFWKTMNERGLIYKGTHSGW 136

Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y++ DE +Y + ++ K     G          N V + EE  YFFRLS ++D+L++Y + 
Sbjct: 137 YAVSDETFYPESQIEKVTDSNGISKMISKETKNEVIFHEESNYFFRLSKFRDRLINYLKE 196

Query: 183 HPEFILPIERRNEVISFVKS-GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           +P+ I P  + + +++ ++   L+DLS+SR +    WGI++P D    +YVW DAL NY+
Sbjct: 197 NPQLITPKNKYDSILAELEGEKLEDLSISRPSSRLLWGIEVPGDDTQRIYVWFDALINYI 256

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + +   +  WPA +HVIGKDI RFH IYWP FL++A+LPLPK++  H   L  
Sbjct: 257 TAAGYPKSLNAPTSP-WPA-VHVIGKDIARFHCIYWPIFLMAADLPLPKQIVIHSHWLCD 314

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+DP++ ++  G DA R+FL        D  Y +         +L     
Sbjct: 315 GFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSNIESDSNYSEREF-HFTRENLIGKYA 373

Query: 360 NLVSR----------SVSMILKDY---------DGMIPTPGAFTESDESILSVCSRVLQE 400
           NLV+R          SV+M+ +           D     P A  ++   + +    +   
Sbjct: 374 NLVTRCGGPSFDIEESVAMLKEGSFDKIESFWEDCPYENPAAVKDAAGKLRACLDNLYPA 433

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW----ELKKTN--PDRAST-------V 447
           +  +++N    +A       +   ++ F   +PW    E+K  N  P++  T       +
Sbjct: 434 MDTHLENFDHMKATQVWWEAIEAGNQLFQLGQPWIFTKEMKNENLQPEKRETSKLVQSFL 493

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +Y+  E  R  +IL+   +P L++KI D L V+ + R  Q
Sbjct: 494 VYMAAETCRIGSILMGPIMPHLSHKILDRLGVSMQKRTAQ 533


>gi|190346781|gb|EDK38949.2| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 565

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 179/520 (34%), Positives = 281/520 (54%), Gaps = 43/520 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI++ I Y NA+PH+GH Y M + D  +R+ +L   +  F TGTDEHG KI   A+  G+
Sbjct: 17  YITSPIFYVNAKPHLGHLYSMHLCDTRSRWEKLKNKESFFVTGTDEHGLKIQAVAEKRGI 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K  VD+ S NF+ +A+  DI YD FIRTT+  H ++ +  WK ++++G IYKG +SGW
Sbjct: 77  SPKTLVDEVSLNFKHLAEKFDIQYDRFIRTTDGDHIESVKHFWKTMNERGLIYKGTHSGW 136

Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y++ DE +Y + ++ K     G          N V + EE  YFFRLS ++D+L++Y + 
Sbjct: 137 YAVSDETFYPESQIEKVTDSNGISKMISKETKNEVIFHEESNYFFRLSKFRDRLINYLKE 196

Query: 183 HPEFILPIERRNEVISFVKS-GLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           +P+ I P  + + +++ ++   L+DLS+SR +    WGI++P D    +YVW DAL NY+
Sbjct: 197 NPQLITPKNKYDSILAELEGEKLEDLSISRPSSRLSWGIEVPGDDTQRIYVWFDALINYI 256

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + +   +  WPA +HVIGKDI RFH IYWP FL++A+LPLPK++  H   L  
Sbjct: 257 TAAGYPKSLNAPTSP-WPA-VHVIGKDIARFHCIYWPIFLMAADLPLPKQIVIHSHWLCD 314

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+DP++ ++  G DA R+FL        D  Y +         +L     
Sbjct: 315 GFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSNIESDSNYSEREF-HFTRENLIGKYA 373

Query: 360 NLVSR----------SVSMILKDY---------DGMIPTPGAFTESDESILSVCSRVLQE 400
           NLV+R          SV+M  +           D     P A  ++   + +    +   
Sbjct: 374 NLVTRCGGPSFDIEESVAMSKEGSFDKIESFWEDCPYENPAAVKDAAGKLRACLDNLYPA 433

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW----ELKKTN--PDRAST-------V 447
           +  +++N    +A       +   ++ F   +PW    E+K  N  P++  T       +
Sbjct: 434 MDTHLENFDHMKATQVWWEAIEAGNQLFQLGQPWIFTKEMKNENLQPEKRETSKLVQSFL 493

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +Y+  E  R  +IL+   +P L++KI D L V+ + R  Q
Sbjct: 494 VYMAAETCRIGSILMGPIMPHLSHKILDRLGVSMQKRTAQ 533


>gi|194476532|ref|YP_002048711.1| methionine--tRNA ligase [Paulinella chromatophora]
 gi|171191539|gb|ACB42501.1| methionine--tRNA ligase [Paulinella chromatophora]
          Length = 524

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 169/454 (37%), Positives = 250/454 (55%), Gaps = 10/454 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PH+G AY  +  D LAR+ RL G  V+F TG DEHGQKI + A+ A + 
Sbjct: 5   VTTPLYYVNDRPHLGSAYTTLACDALARYQRLIGKSVVFITGCDEHGQKIQRTAEAASLK 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   +Q S  +  +     IS D FIRTT+ RH    +  + ++   GDI +G   GWY
Sbjct: 65  PQESCNQVSEEYHHLWSRWQISNDRFIRTTDLRHQAIVKEFFLRVEKAGDILEGQQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E +  D+ V    D Q    Q   ++W +E   FF LS YQ ++    +  P FIL
Sbjct: 125 CVACEEF-KDEPVDAEGDNQCAIHQRR-LEWRDEPNLFFNLSRYQKQIEELIQK-PGFIL 181

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P+ RR E+ + V  GL + S+SR    WGI +P    +  YVW DAL  YLT      +P
Sbjct: 182 PVSRRREIENLVAQGLHNFSISRINLPWGIPVPGHTDHTFYVWFDALIGYLTALLEPSDP 241

Query: 249 ---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              D    + WPA++HVIGKDILRFHA+YWPA L+SA L +P  VF HGF+  +G+K+ K
Sbjct: 242 PELDIILRRGWPANVHVIGKDILRFHAVYWPAMLMSAGLEVPDMVFGHGFLTREGKKMGK 301

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN++DP  ++EE G D++R++L+R+I  G+DG + K      +N DL+N IGNL++R+
Sbjct: 302 SLGNILDPELLLEEYGRDSVRWYLLRDIPFGEDGDFQKKRFIDLINNDLSNTIGNLLNRT 361

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           +SM  + +   +P       +D+  L+  S+    I     ++L   RA    + L ++ 
Sbjct: 362 LSMARRWFANAVPDCREAV-TDQHSLAKASQSAILINITALDKLEFRRAAEATLDLAAQA 420

Query: 425 DRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIR 456
           + +   Q PW   K    R      LY  +E  R
Sbjct: 421 NTFLSEQAPWSRIKQEGGREQVGADLYAVLETTR 454


>gi|193216594|ref|YP_001999836.1| methionyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001917|gb|ACF07132.1| methionyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 517

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/476 (34%), Positives = 272/476 (57%), Gaps = 11/476 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ ++  YIST I YP+ + HIGH     +A V   F R +G D  F TG DEHGQKIA+
Sbjct: 1   METKKTFYISTPIYYPSGKLHIGHLLTTTLAWVYRNFKRNEGYDTFFVTGIDEHGQKIAQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ A ++ + + D+ ++ F ++ D L I YD F RTT  +H    + ++  +  KG IY
Sbjct: 61  KAKLANLSDQAYADEQAKIFLELWDDLKIDYDFFSRTTSPKHEVIVKKVFDALLKKGFIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           KG Y G YS+ DE +    + +   +G+YY+    + +  + EE YFF++S++   +  Y
Sbjct: 121 KGKYEGLYSVEDEEFLTKSQAFL-INGEYYHPTSKHKLNVVSEESYFFKMSSFGPWIKDY 179

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDAL 235
           +E++P+F+      NE++ +F+  GL+DLS++R +FDWGIK+    D   +++YVW+DAL
Sbjct: 180 FENNPDFVSSKATINEMLNNFINPGLEDLSVTRVSFDWGIKLDQYQDKKTHVIYVWLDAL 239

Query: 236 TNYLTTTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            NYLT   + +  D +  KFW      +H++GK+I RFH IYWP FL + +L LP K   
Sbjct: 240 FNYLTALNFWEEDDENYQKFWVNGTERVHILGKEISRFHCIYWPIFLQALDLKLPTKEIV 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H +I+    K+SKS GNVIDP+ ++++ G++ ++YF   ++    D  + +  L   +NA
Sbjct: 300 HSWIVTPEGKMSKSKGNVIDPLPLVKKYGIEEVKYFFSSQVNIDSDFAFSESLLINVLNA 359

Query: 353 DLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN  GNLV+R++ M+ + + +G           D+ +     ++ Q   E+  N    
Sbjct: 360 DLANNFGNLVNRTIKMVNQSFKEGTTYQEKDLLALDKELYLKIEQLYQSYCEHFNNFYAD 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +AL + + L S ++ Y D  +PW+LK  N +R + VL   +  I  +  +L    P
Sbjct: 420 KALKKAVELSSFLNEYIDRNEPWKLKD-NLERLNVVLNTLLNGIYVVNYMLSVAFP 474


>gi|268570204|ref|XP_002640717.1| Hypothetical protein CBG19784 [Caenorhabditis briggsae]
          Length = 474

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 182/486 (37%), Positives = 280/486 (57%), Gaps = 23/486 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62
           Y+++ I Y NA+PHIGHAY  ++ D   R+++L          LF+ GTDEHG      +
Sbjct: 1   YVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSIGTDEHG-----TS 55

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T K F DQ S  F  + D L+IS+ +FIRTT+ +H ++ +  W+ + D+G IYK 
Sbjct: 56  QLAGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHFWRVLQDRGHIYKS 115

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSG+YS+ +E +  ++EV + A+ +         V+W+EEE Y FRLS +++K+  + E
Sbjct: 116 SYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFRLSEFREKVGEWIE 175

Query: 182 SHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              + + P++ ++  + S    G   +S +RK   WGI +PDDP   +YVW+DAL NYLT
Sbjct: 176 K-TDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTIYVWLDALVNYLT 234

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +GY  +        WP    VIGKDI +FH  YWPAFL++A+LPLP++VF HG  L   
Sbjct: 235 VSGYPKD-----RLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVHGHWLVDN 289

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV++P   I++   + LRYFL+++     D  +  +   + VN+DL N +GN
Sbjct: 290 VKMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSDLVNNVGN 349

Query: 361 LVSRS-VSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           L++RS V  I K   Y   +       E  E +L +     ++  E   +   ++ + Q+
Sbjct: 350 LLNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYYYKGIEQL 409

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + E +R F   +PW  K+T+ +R  ++L+VT E IR ++ILLQ   PK+AN   D L
Sbjct: 410 MLTMKEANRVFQLSQPW--KETDSERLESLLFVTYETIRIVSILLQPITPKMANFCLDRL 467

Query: 478 FVADEN 483
            V   N
Sbjct: 468 GVDQRN 473


>gi|31544361|ref|NP_852939.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541205|gb|AAP56507.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930403|gb|ADC30342.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 590

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 172/511 (33%), Positives = 275/511 (53%), Gaps = 21/511 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +K YIST I Y +  PHIGHAY  I+ D LARF +  G DV F +GTDE G+KI  
Sbjct: 11  MLKNKKCYISTPIYYASGNPHIGHAYTTILGDFLARFKKQRGYDVFFLSGTDEFGKKIET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++  +T +  VDQ S  F+++ D+L+I    F+RTTE +H +  + ++     K  IY
Sbjct: 71  KAKSLNLTPQKMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIY 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA--------------DGQYYNAQHNPVQWMEEEGYF 166
              + G Y +  E  Y    V K A              D Q Y    + +  + E  YF
Sbjct: 131 LDQWQGLYCVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVGHKISSINEPSYF 190

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
            +LS + D +      +   + P  R  E++ +FV  GLKDLS+SR +  WGI+ P +  
Sbjct: 191 IKLSEFSDFIKESLTDNVPSVFPTSRNKEMLNNFVNVGLKDLSISRTSISWGIETPLNKS 250

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLS 281
           + +YVW+DAL +YLT+ G+    D    +FW  D    +H+I K+I RFH IYW  FL  
Sbjct: 251 HRIYVWLDALFSYLTSMGFGSEDDKLYQEFWNNDSSERIHLIAKEITRFHRIYWVIFLKM 310

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +  P ++ SHG+IL   G K+SKSL N+IDPIE+ E  GVD LRY+L++E++  +DG 
Sbjct: 311 LGIKQPTRMISHGWILDENGNKMSKSLNNIIDPIELAELFGVDQLRYYLLKELSLSEDGK 370

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             K  +++ +N+DL N +GNLV R + M+    +  I    A  E ++  L+   ++  E
Sbjct: 371 VGKRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAE 430

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLA 459
             + ++   I  A+  V+++  E     + +KPWEL K N  +  + +L+     IR + 
Sbjct: 431 FEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANILFAGACAIRTVF 490

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           +LL+  +   + ++++ +    E    ++++
Sbjct: 491 VLLEPILTTKSKEVYEQMNFTPEQTQLKNIN 521


>gi|50311457|ref|XP_455753.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644889|emb|CAG98461.1| KLLA0F14971p [Kluyveromyces lactis]
          Length = 568

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 181/529 (34%), Positives = 284/529 (53%), Gaps = 53/529 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I YPNA+PH+GH Y  ++ DV  R+ +L G D  FTTG DEHG KI  AAQ  
Sbjct: 11  KFHITTPIFYPNAKPHLGHLYSSLLCDVQNRWKKLAGQDTCFTTGVDEHGLKIQLAAQQK 70

Query: 66  GVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G +  K FVD+   +F  +    +I +  FIRTT+  H +  + LW    + G IYKG +
Sbjct: 71  GYSNPKAFVDELCEHFVHLDKDANIKFTRFIRTTDPDHVNNVKKLWNLCYNNGYIYKGEH 130

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGA---DGQYYNAQ-HNPVQWMEEEGYFFRL 169
            GWYS+ DE +Y D ++           Y G+   D +Y N++  N V +  E  YFF+L
Sbjct: 131 KGWYSVSDETFYPDTKILKLTIDGPPIPYDGSFDPDAKYINSESRNEVTYQSELNYFFKL 190

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQY 226
           SA+Q+ L+     +P FI P  R ++++  ++S  L+D+S+SR      WGI +P+D   
Sbjct: 191 SAFQEPLIKLLRENPTFIYPPLRHSQILRELESNELRDISVSRPATRLQWGIPVPEDESQ 250

Query: 227 IMYVWIDALTNYLTTTGYLD----NPDGSKA------------KFWPADLHVIGKDILRF 270
            +YVW DAL NYLT+ G +D    + D ++             ++W    HVIGKDI++F
Sbjct: 251 KVYVWFDALCNYLTSIGGIDAIRNDVDSTQVLHNNRSFIEKPKEWWENTEHVIGKDIIKF 310

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H +YWPAFLL+A LPLP +V  HG  L  G K+SKSLGNV+DPI++I   G D  R++L+
Sbjct: 311 HTVYWPAFLLAAKLPLPNRVVVHGHWLSGGVKMSKSLGNVVDPIQIISYYGADTTRWYLL 370

Query: 331 REIACGKDG-FYDKDGLKKRVNADLANGIGNLVSR------SVSMILKDYDG--MIPTPG 381
                  DG F +K+  + R    L + +GNL++R      S++  ++ + G  +     
Sbjct: 371 ENSNIESDGNFIEKNLWETR--ELLCSKLGNLINRCGGKKFSLASGVELFSGKPIEELSS 428

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFDAQKPWELK 437
            F +  ++  +   + L    E++ N      I  A   + ++++E + +  + +PW  K
Sbjct: 429 VFPKESQAEFTALLKSLDNCTESVNNCFQQYDITGAQKILWNIINEANSFIQSTEPWSKK 488

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               D    ++Y  +E  R   I  Q  +P +A ++ + L V+ + R  
Sbjct: 489 GLEKD---LIVYSAMEAARISLIFSQPIIPNIAERLLNRLDVSSDRRTL 534


>gi|296242227|ref|YP_003649714.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094811|gb|ADG90762.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 503

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 269/482 (55%), Gaps = 17/482 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPN  PHIGHAY  + ADVLARF RL   DV F TG DEHG KI + A+  G
Sbjct: 4   FYITTPIYYPNGPPHIGHAYTTVYADVLARFARLIEKDVFFLTGNDEHGLKIQRFAEKLG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T K  VD+ +  +RD    L+ISYD FIRTT+  H       ++K+  KG +YK  Y G
Sbjct: 64  KTPKEVVDEMAVIYRDYWLRLNISYDYFIRTTDSVHEKVVMSSFEKLYRKGYVYKDKYGG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            Y +  E YY   E Y   +G+ Y   HN P++++EEE Y+F+LS ++D LL    ++ +
Sbjct: 124 LYCVDCEKYYLPGE-YVEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLEVLRNN-K 181

Query: 186 FILPIERRNEVISFV-KSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            + P E   EVIS + K GL+DLS++R  +   WG+K+P DP Y++YVW DAL NY+T  
Sbjct: 182 IVYPEEYSLEVISRIEKEGLRDLSIARPVERVSWGVKVPFDPNYVIYVWFDALLNYITGA 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + +  + K+W    HV+GKDIL FH   W + L   ++P PKKV  H F+++KG K
Sbjct: 242 GYATDLERFE-KYWANVHHVVGKDILWFHTAIWFSILKGLDIPPPKKVIVHAFLINKGLK 300

Query: 303 ISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           I KS GNVI   +++    G D +RY L R     KD     + +    N +LA+  GNL
Sbjct: 301 IGKSAGNVISIDDLLARYNGPDGVRYILSRVFNMSKDSEVSFELMDAIYNDELADTYGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  ++ +K   G I       +  E I+      L    E M+N  +  A+ +++ L+
Sbjct: 361 IRRVGALAIKKLRGKIYRREVDKKLSEQIMVKMGNYL----ERMKNYDVPGAIIEIMDLL 416

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E + Y +  +PWE  K +P +    LY  +E+IR   I L   +P +A+K+ D      
Sbjct: 417 REGNAYVNNTRPWE--KEDPSKE---LYGLLELIRVSTIALAPVIPSVASKVADEFGFKI 471

Query: 482 EN 483
           EN
Sbjct: 472 EN 473


>gi|284931170|gb|ADC31108.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 597

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 172/511 (33%), Positives = 275/511 (53%), Gaps = 21/511 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +K YIST I Y +  PHIGHAY  I+ D LARF +  G DV F +GTDE G+KI  
Sbjct: 11  MLKNKKCYISTPIYYASGNPHIGHAYTTILGDFLARFKKQRGYDVFFLSGTDEFGKKIET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++  +T +  VDQ S  F+++ D+L+I    F+RTTE +H +  + ++     K  IY
Sbjct: 71  KAKSLNLTPQKMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIY 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA--------------DGQYYNAQHNPVQWMEEEGYF 166
              + G Y +  E  Y    V K A              D Q Y    + +  + E  YF
Sbjct: 131 LDQWQGLYCVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVGHKISSINEPSYF 190

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
            +LS + + +      +   + P  R  E++ +FV  GLKDLS+SR +  WGI+ P +  
Sbjct: 191 IKLSEFSNFIKESLTDNVPSVFPTSRNKEMLNNFVNVGLKDLSISRTSISWGIETPLNKS 250

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLS 281
           + +YVW+DAL +YLT+ G+    D    +FW  D    +H+I K+I RFH IYW  FL  
Sbjct: 251 HRIYVWLDALFSYLTSMGFGSEDDKLYQEFWNNDSSERIHLIAKEITRFHRIYWVIFLKM 310

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +  P ++ SHG+IL   G K+SKSL N+IDPIE+ E  GVD LRY+L++E++  +DG 
Sbjct: 311 LGIKQPTRMISHGWILDENGNKMSKSLNNIIDPIELAELFGVDQLRYYLLKELSLSEDGK 370

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             K  +++ +N+DL N +GNLV R + M+    +  I    A  E ++  L+   ++  E
Sbjct: 371 VGKRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAE 430

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLA 459
             + ++   I  A+  V+++  E     + +KPWEL K N  +  + VL+     IR + 
Sbjct: 431 FEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANVLFAGACAIRTVF 490

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           +LL+  +   + ++++ +    E    ++++
Sbjct: 491 VLLEPILTTKSKEVYEQMNFTPEQTQLKNIN 521


>gi|326472661|gb|EGD96670.1| methionine-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 559

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 172/501 (34%), Positives = 260/501 (51%), Gaps = 63/501 (12%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y NA PHIGH Y ++IAD+L R+ R                            
Sbjct: 56  YVTTPIFYVNAAPHIGHLYTILIADILKRWQR---------------------------- 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F   N   F+ +A   + SYD FIRTT+  H    +  W+ ++ +G IY+G + GW
Sbjct: 88  ----FAIGNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEGW 143

Query: 128 YSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           YS+ DE +Y    V+   D   G+   A       V++ +E  Y F+LSA+QD+LL +Y 
Sbjct: 144 YSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRLLEHYR 203

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
            +P+FI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+DAL NY+
Sbjct: 204 KNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDALVNYI 263

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H      
Sbjct: 264 TYAGYPFTPGREQESIWPADIHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHAHWTMN 323

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     L  G+G
Sbjct: 324 HSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNILQGGLG 383

Query: 360 NLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409
           NL SR +          ++K  +G     G+    D S +      L+++   + NQ+  
Sbjct: 384 NLCSRVMRGKGWNVRESVVKMANGQ----GSRRAKDPSEIEHM-EFLEKVPGLVSNQMDE 438

Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAIL 461
               RAL +++ ++ + +RY  +  PW L K   T+P   D+   V+Y   E +R   IL
Sbjct: 439 LNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEASTDPTAHDQLVGVIYNATESLRIAGIL 498

Query: 462 LQAFVPKLANKIFDILFVADE 482
           LQ F+P+ A K+ D+L V ++
Sbjct: 499 LQPFMPEKAKKLLDMLGVEED 519


>gi|293364032|ref|ZP_06610768.1| methionine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552522|gb|EFF41296.1| methionine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 515

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 169/505 (33%), Positives = 278/505 (55%), Gaps = 19/505 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  YI+T I Y +   HIGH Y   +A  +A + +  G DV F TG+DEHGQKI   
Sbjct: 3   KNKKTFYITTPIYYASGNLHIGHLYTTTLAWTIANYKKSRGYDVKFLTGSDEHGQKIFLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ A ++ + +VD   +N++ M     I YD F RTT + H +T + +++    KG IY 
Sbjct: 63  AQEANISAQKYVDDLVKNYKKMWSDFGIDYDYFSRTTNQNHKETIQQIFELFLKKGIIYN 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
           G Y G YS+ DE ++   +  KG DG YY+   N  +  ++EE YFF++S +Q+ L    
Sbjct: 123 GNYEGLYSVSDEEFFTKTQAVKGQDGNYYHPLSNHKLSVVKEESYFFKMSEFQEWLKLEI 182

Query: 181 ESHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++P ++ P +  NE+  +F+  GL+DLS++R    WGIK   DP++ +YVW+DAL NY+
Sbjct: 183 LNNPTWLNPQKVINELNNNFISKGLEDLSVTRSNVSWGIKTLSDPKHTIYVWLDALCNYI 242

Query: 240 TTTGY--LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           +  G+    N +    K+W      +H++GK+I RFH IYWP FL + ++ +P K+ SHG
Sbjct: 243 SALGFNLKSNTNTDFEKYWQNGDEIVHLLGKEISRFHFIYWPIFLKALDIKMPSKMISHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +I+    K+SKS  NVIDP +++ +   + ++YF V +I  G+DG +D    +  +N++L
Sbjct: 303 WIITPTGKMSKSKNNVIDPYDLLAKYHPEMIKYFFVSKINLGEDGVFDIKLFEDTINSEL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----I 410
            N  GNLVSR++ MI   +D  I       +SD++I       + E +E          +
Sbjct: 363 INNYGNLVSRTLKMISNSFDNGIKHK----KSDDNIHKNIDTAILESKEKFIKYFDEFNL 418

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              L   I L + +++Y D   PW+L     D    +L   +  I  ++  L+  +P+  
Sbjct: 419 STGLKVAIDLGNTLNKYIDETTPWKLTD-RLDELELILSRLLNGIYAMSTYLKVVMPQKM 477

Query: 471 NKI---FDILFVADENRCFQSLDQR 492
           N++    +I F  ++ + F+  D +
Sbjct: 478 NEVSKALNIEFDLEQVQNFEKFDNK 502


>gi|255070991|ref|XP_002507577.1| predicted protein [Micromonas sp. RCC299]
 gi|226522852|gb|ACO68835.1| predicted protein [Micromonas sp. RCC299]
          Length = 509

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 184/514 (35%), Positives = 290/514 (56%), Gaps = 34/514 (6%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PHIGH Y   +ADV AR  R  G DV F TGTDEHG K+ ++A+  G+ 
Sbjct: 1   VTTPVYYVNDKPHIGHVYTSTVADVYARLQRNMGKDVFFLTGTDEHGLKVEQSAEKRGIG 60

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
           T+   D+NS  FR++ D ++ISY  FIRTT+  H    + L + +  KG IY G + GWY
Sbjct: 61  TQQLADENSALFREVMDDMNISYTSFIRTTDTSHQVQVQRLVEILLQKGFIYLGKFEGWY 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
               E YY   E+     G         +    EE Y+F+LSA+Q++LL ++E +P F+ 
Sbjct: 121 DEGQEEYYTAKEI-----GYKSLISGKDLTRSSEENYYFKLSAFQEQLLRFHEDNPYFLT 175

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT----TTGY 244
           P  RRNE+I+ ++ GL D+ +SR  F WGI +P D  +++YVWIDAL NY+T      G 
Sbjct: 176 PPARRNEIINRLQEGLNDIPVSRTNFTWGITMPGDDSHVIYVWIDALLNYITALNLAEGL 235

Query: 245 LDNPDGSKAK-------FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
             + D S          FWPA LHV+ K+I  FHA+ WPA LL+  LPLP++V +HGF +
Sbjct: 236 GKDADESICHSEEGLKDFWPASLHVMAKEISWFHAVIWPALLLALELPLPERVHAHGFWI 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEV----GVDALRYFLVREIACG-KDGFYDKDGLKKRVNA 352
            +G+K+SKSLGN +D +EV++      G+D LRY+L+ E   G +D  +    + +  + 
Sbjct: 296 REGKKMSKSLGNFVD-LEVMKRFSDHYGLDGLRYYLLTEGPVGSQDANFSAGRVHEVYST 354

Query: 353 DLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESIL-------SVCSRVLQEIREN 404
           DLAN +GN +SR+ +MI K Y +G +P+    + +   I        ++ +    ++  +
Sbjct: 355 DLANTLGNSLSRTTAMINKYYSEGGLPSE--ISSAGNRITWERFDWPTLTAEAAADVVRH 412

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILL 462
           ++   + +A    I LV+ VD +    +P+ + K  +  +    VLY  +E +R   +LL
Sbjct: 413 VEALELPKATNAAIGLVARVDLFISETEPFRMAKDESKAEELGAVLYQCLEALRIACVLL 472

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           + F+P+  +++   + + + N   +     LKPG
Sbjct: 473 EPFLPQKIDEVGKHMDLGNGNFKERVRWGSLKPG 506


>gi|198431365|ref|XP_002126600.1| PREDICTED: similar to putative methionyl tRNA synthetase [Ciona
           intestinalis]
          Length = 567

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 172/511 (33%), Positives = 273/511 (53%), Gaps = 30/511 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-DGLDVLFTTGTDEHGQKIAK 60
           K  +  Y +T I Y N+ PHIGH Y   +AD   R+ +L    +    TGTDE+G K+ K
Sbjct: 26  KRCKTYYATTPIYYVNSVPHIGHLYTTTLADTACRWKQLVTDTECRLATGTDEYGSKVMK 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA    + T  + ++ S  F++M D   +SY DFIRTTE+RH +T +  W+ +   G IY
Sbjct: 86  AAAINDMETIEYCNKISSRFKEMCDEFGLSYHDFIRTTEERHKETVQHFWEVVQSNGYIY 145

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADG--QYYNAQH-NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWY   DE +      +EV+  + G  +Y + +  + V+W +E  Y F+LS + D
Sbjct: 146 KGIYEGWYCTSDETFLTQSQVEEVHNKSTGKSEYVSIESGHAVEWTKETNYMFQLSFFTD 205

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
            +     S P+F+ P + RN V+  +   + DLS+SR+     WGI +P D    +YVW+
Sbjct: 206 IIREKILSDPDFVYPSKARNAVLKLLDEQIGDLSISRERSRVPWGIPVPRDSSQTIYVWM 265

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT +GY   P  S  + WPAD+H IG DIL+FHAI+WPAFL++A + LPK++ +
Sbjct: 266 DALVNYLTVSGY---PRSSYTEMWPADVHFIGVDILKFHAIFWPAFLMAAGIELPKQIVA 322

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS GNV+DP ++  +V  +  +YFL+R+     D  Y +  + + +NA
Sbjct: 323 SSHWTIDYSKMSKSKGNVVDPFDIAGKVTAEGFKYFLLRQGVLEHDCNYTESLVYEVINA 382

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-------LQEIR--- 402
           DL N +GN ++R+ +  L   +   P        DE    +  R+       +Q+++   
Sbjct: 383 DLVNVLGNCLNRAGAKKLNPQNHYPPFHKEIFSKDELGNYIEKRITDLDMNYIQQVKNLP 442

Query: 403 ----ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVI 455
                +      + A+ ++IS+  E +      + W+L + +PD      ++++   E +
Sbjct: 443 AVADSHCSKFHFYNAIHEIISIAREANMMVHRHQAWKLDE-HPDDLKLLESIVHSVFEGL 501

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCF 486
           R   ILLQ  +P LA K+ D L +    R +
Sbjct: 502 RVAGILLQPMIPTLATKLLDKLNIPLNERTW 532


>gi|313678697|ref|YP_004056437.1| methionine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950304|gb|ADR24899.1| methionine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 516

 Score =  297 bits (761), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 175/484 (36%), Positives = 281/484 (58%), Gaps = 16/484 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+T I Y +   HIGH Y   +A ++A + R+ G DV F TG+DEHGQKI + A
Sbjct: 2   KNKTFYITTPIYYTSGPLHIGHLYCTTVAWIIANYKRVLGYDVKFLTGSDEHGQKIEQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG   +V+V++   +++ M    +I+YD F RTT+ +H    + ++ K    G IYKG
Sbjct: 62  ALAGKEPQVYVNELVDSYKKMWQQYNINYDYFSRTTDPKHMKMVQTIFTKFLQLGLIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDE-VYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            Y G YS+ DE +   ++ V+K  +G+YY+    + +  M EE YFF++  +Q+  L+  
Sbjct: 122 KYDGLYSVNDEEFLTKNQAVFK--NGEYYHPTSGHKLVLMSEESYFFKMKEFQNWWLNEV 179

Query: 181 ESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++PE++LP +  NE+IS FV  GL+DLS++R   +WGIK  +DP++ +YVW+DAL NY+
Sbjct: 180 NNNPEWLLPSKMTNEMISNFVSEGLEDLSVTRVNINWGIKTNEDPKHTLYVWLDALFNYV 239

Query: 240 TTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +  G+ LDNP     K+W      +H+IGK+I RFH IYW  F  +  + +P K+++HG 
Sbjct: 240 SALGFDLDNPGDDYLKYWENGDEIVHIIGKEISRFHFIYWTIFTKALGIKVPNKIYAHGL 299

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K G K+SKSL NVI+P  +  +   + ++Y+    I  G+DG + ++ L   VNADL
Sbjct: 300 LRDKDGRKMSKSLNNVIEPEYLFSKYHDEMIKYYFASAITFGEDGNFSEEKLIDIVNADL 359

Query: 355 ANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            N  GNLVSR++ MI   + +G+     + +E  E    + S V + I E M N  + +A
Sbjct: 360 VNNYGNLVSRTLKMISNSFPEGLFYRQSSQSEHLEIEGKINSFVPKFI-ELMDNFKLDKA 418

Query: 414 LAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L   ++L   +++Y D  +PW L  + N      +L   +  I  ++  LQ  +P   NK
Sbjct: 419 LEHTMNLSDSLNKYIDTLRPWTLTSEENKAELENILIRLLNGIYAVSWSLQIVMP---NK 475

Query: 473 IFDI 476
           I ++
Sbjct: 476 ITEV 479


>gi|15828961|ref|NP_326321.1| methionyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|14424467|sp|Q50319|SYM_MYCPU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14089904|emb|CAC13663.1| METHIONYL-TRNA SYNTHETASE (METHIONINE--TRNA LIGASE) (METRS)
           [Mycoplasma pulmonis]
          Length = 509

 Score =  296 bits (758), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 165/474 (34%), Positives = 260/474 (54%), Gaps = 7/474 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ +YI+T I YP+   H+GH Y   IA VL  + ++ G +  F+TG+DEHGQKI   AQ
Sbjct: 2   KKTIYITTPIYYPSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              + T+ +VD+ +  F D     +I YD F RTT K H +  R ++ K+ +K  IY   
Sbjct: 62  ELKLETQDYVDRQANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +  + +  K  +  ++   ++ +  +EEE YFF L+ + D +  + +  
Sbjct: 122 YVGLYSVSDEEFLTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQ- 180

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            + I      NE+ S F+  GL++LS++R   DWGIKI    ++++YVW+DAL  YLT  
Sbjct: 181 -DIISSKAIVNELKSNFINKGLENLSVTRIKLDWGIKIDQSSKHVIYVWLDALFQYLTNL 239

Query: 243 GYLDNPDGSKAKFWP---ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY         KFW      +HV+GK+I RFH IYWP FL S N+ +P K+ SHG+I+  
Sbjct: 240 GYGSKNQSLYEKFWKNGDERVHVVGKEITRFHCIYWPIFLKSLNVKMPTKIISHGWIVTP 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP+ +IE+ G + L+YFL+ +++  KDG + ++ L    N DL N   
Sbjct: 300 EGKMSKSKGNVVDPVVLIEKYGSEVLKYFLIAKLSIKKDGVFSEELLVSAYNNDLVNTFS 359

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+V MIL +YD  +    +  + D  I        +      +     +A    I+
Sbjct: 360 NLISRTVKMILNNYDRPLSFILSKDQEDLEIEKDIKNSFETFCSFAEEYEFDKAFESTIN 419

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L  +++ Y D  +PW L K +  +   VL   +  I  +A  L   +P+ + K+
Sbjct: 420 LGKKLNLYIDKTRPWLLTKED-QKLEIVLNRLLNGIYAMAFELSIVMPQTSQKL 472


>gi|294155450|ref|YP_003559834.1| methionine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600499|gb|ADE19995.1| methionine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 517

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 169/512 (33%), Positives = 277/512 (54%), Gaps = 17/512 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I Y +   HIGH Y   +A  +A + +L+G DV F TG+DEHGQKI  
Sbjct: 5   MNKKKTFYITTPIYYASGNLHIGHLYTTTLAWSIANYKKLNGYDVKFLTGSDEHGQKIFL 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A V  + +VD+    ++ M     I YD F RTT K H  T + ++    ++G IY
Sbjct: 65  KANEANVKPQKYVDELVETYKKMWTDFGIDYDFFSRTTNKNHVKTIQEIFDFFLNEGIIY 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSY 179
           KG Y G YS+ DE +    +      G Y++   N  ++ ++EE YFF++S + + L+  
Sbjct: 125 KGNYEGLYSISDEEFLTKSQAICDESGNYFHPTSNHKLELVKEESYFFKMSKFSEWLIEQ 184

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            +++P ++ P +  NE++ +F+  GL+DLS++R   +WGIK  +D ++ +YVW+DAL NY
Sbjct: 185 IKNNPTWLNPQKTVNEIMNNFLLKGLEDLSVTRTNVEWGIKTLNDDKHTIYVWLDALCNY 244

Query: 239 LTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           ++  G+ +        K+W      +H++GK+I RFH IYWP FL + N+  P K+ SHG
Sbjct: 245 ISALGFDIKESSTDFVKYWQNGDEIVHLLGKEIARFHFIYWPIFLKALNIKQPTKLISHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +I+    K+SKS  NVIDP +++++   + ++YF V +I  G DG +D +  +  +N++L
Sbjct: 305 WIITPTGKMSKSKNNVIDPYDLLKKYHPEMIKYFFVSKINIGDDGVFDIENFENIINSEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +   I    +     ++I        +E    M N  +   L
Sbjct: 365 INNYGNLVSRTLKMISNSFSNGINFHKSIKTIHKNIEQEIINSKEEFINKMDNYELSEGL 424

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              I+L S +++Y D   PW+L + N +    VL   +  I  ++  L   +P+   KI 
Sbjct: 425 KIAINLSSNLNKYIDETTPWKLTE-NKEELELVLSRLLNGIYAVSSYLSIVMPQ---KIL 480

Query: 475 DILFVADENRCFQSLDQRLK-------PGFML 499
           D+    + N  F  ++   K       P FML
Sbjct: 481 DVSKALNINLSFDKIENFNKFDGVISAPKFML 512


>gi|116198129|ref|XP_001224876.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51]
 gi|88178499|gb|EAQ85967.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51]
          Length = 797

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 173/512 (33%), Positives = 260/512 (50%), Gaps = 54/512 (10%)

Query: 3   EREKLYISTAIAYPNA----QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           E +  Y++T I Y NA    +PHIGH Y M++ADV  R+  L G    F TGTDEHG K+
Sbjct: 37  EDKPFYVTTPIFYVNAVRLVEPHIGHMYSMVLADVFKRWQTLIGKKAFFVTGTDEHGMKV 96

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +AA  A    K   D+N+  F ++A +  I YD F+RTT++ H       W   + K  
Sbjct: 97  QQAAALADKEPKQLCDENAEKFEELARMARIDYDRFMRTTDRDHVQAVEHFWSSSTRKP- 155

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                                  + GA         N V+W+EE+ Y FR++  +D+LL 
Sbjct: 156 -----------------------FTGAVYMASAETKNKVEWVEEKNYCFRMTELKDRLLD 192

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALT 236
           +YE +P +I P  R NEV+ +VK+  +DLS+SR  +   WGI++P+DP   +YVW+DAL 
Sbjct: 193 FYEKNPGWIEPASRMNEVVDWVKNHFEDLSISRPVQRLSWGIRVPEDPSQTIYVWVDALI 252

Query: 237 NYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY+T  G+ D  P  S    WPAD+HVIGKDILRFH +YWPA L++ ++PLPKKV  H  
Sbjct: 253 NYITAAGFPDWTPGESHKGGWPADVHVIGKDILRFHCVYWPALLMALDIPLPKKVLVHSH 312

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--------- 346
                +K+SKS+GNV++P+  +   GVDA RY+L+ +     D  Y  D L         
Sbjct: 313 WTLNNKKMSKSVGNVVNPLYAMNRWGVDATRYYLLAQGGIADDANYANDHLVIKYKKYLQ 372

Query: 347 ------KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVL 398
                   R+    A  + ++V+RS      D+D M+ +  P        +   +     
Sbjct: 373 GGLGNLLGRLTRPKAWNVRDIVTRSPPD--HDFDVMMHSFMPKEIRLDLHATEQMLKGAA 430

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEV 454
             +   M+      A+ ++  + + ++     ++PW L K+        A   L++  E 
Sbjct: 431 PIVASRMEKHEPKEAIRKIFKISTTLNELLSRREPWALVKSEDAADHAVADKTLFLVAEG 490

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +R   ILLQ F+P  A ++ D L VA + R F
Sbjct: 491 LRISGILLQPFLPDKAAQLLDTLGVARDKRTF 522


>gi|222083048|ref|YP_002542413.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221727727|gb|ACM30816.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 521

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/523 (33%), Positives = 283/523 (54%), Gaps = 37/523 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T+I Y NA PH+G A E++ AD  AR  RL G DV F  GTD++  K  +AA+ AG 
Sbjct: 7   YITTSIPYVNAAPHVGFALELVQADAYARHSRLLGRDVRFQCGTDDNSLKNVRAAEAAGR 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSG 126
               FV +N+  F  +   L+IS D F+RT+    H TC   LW   +  GD+Y+  Y G
Sbjct: 67  PVADFVGENADRFEKLGRRLNISNDAFVRTSTDPRHITCVHSLWNACAKNGDLYRKSYEG 126

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           +Y +  E +Y   E+    DG+    +H  P++ ++EE +FFRLS Y D+L    E+   
Sbjct: 127 FYCVGCEQFY---ELPDLDDGRC--PEHGIPLEIVKEENWFFRLSRYGDRLRHLIETEEL 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            ++P+ RRNE+++ ++ GL+D+S+SR   +   WG+ +P   + ++YVW DAL NYLT  
Sbjct: 182 KVVPVHRRNEILALLRRGLEDISVSRSAERARGWGVPVPGTDE-VIYVWFDALANYLTGL 240

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GY  +    + ++W       H +GK I +FHAIYWPA LLSA +PLP  +F HG++   
Sbjct: 241 GYGSDETLFR-QYWAQQGERTHFVGKGISKFHAIYWPAVLLSAGVPLPSSIFVHGYLTVD 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G KI KS GN IDP  ++E     DALRY+L+R I    DG + ++ L+   + +L   +
Sbjct: 300 GRKIGKSAGNGIDPDGLVEYYQTPDALRYYLLRHIRSADDGDFSEERLEAAWSGELGGQL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R ++++   + G+ P     T  D +++   + + ++I +   +  +H  L ++ 
Sbjct: 360 GNLVNRVLTLLASSFSGVTP-----TVPDSALVREATGLPEKISKAFDDYELHLGLTEIF 414

Query: 419 SLVSEVDRYFDAQKPW--------ELKKTN----PDRASTVLYVTVEVIRQLAILLQAFV 466
           S +   +R F  + PW        EL +       DR    L   V  +  +A  L  F+
Sbjct: 415 SYLGSANREFTRKAPWSDAKALAGELGRAERQIISDRLGATLAEQVYGLAIVARCLLPFL 474

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           P+ A+++   L ++    C +  D  +    M   + + +FPR
Sbjct: 475 PESASRLHTKLGIS----CPERYDVPVAVNGMETSSGEVLFPR 513


>gi|156538451|ref|XP_001606422.1| PREDICTED: similar to GH13807p [Nasonia vitripennis]
          Length = 522

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 165/466 (35%), Positives = 255/466 (54%), Gaps = 26/466 (5%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G   +  TGTDEHG K+ +AA++  V T  +    S+ FRDM D  D+ Y  FIRTT+  
Sbjct: 30  GHVTVLNTGTDEHGNKVQQAAKSFNVPTDQYCKITSQKFRDMCDTFDVDYATFIRTTDPA 89

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNP--- 156
           H +T +  W+ + ++  IYKG Y+GWY + +EA+ ++ ++   K A G+           
Sbjct: 90  HQETVQNFWRLLEERNHIYKGKYAGWYCVSEEAFLSNQDLIEKKTASGETIRVSAESGHV 149

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKT- 213
           V+W EEE Y FRLSA+QD L  + +   + + P      ++ +V+ G  + DLS+SR   
Sbjct: 150 VEWAEEENYKFRLSAFQDDLKHWLKDE-KVVQPSTFHKILLQWVEEGSCMADLSISRPAN 208

Query: 214 -FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
              WGI  P DP   +YVW+DAL NYLT  GY   PD    +FWP  + VIGKDIL+FH 
Sbjct: 209 RSPWGIPTPSDPNQTIYVWLDALVNYLTALGY---PDQKFKEFWPPTVQVIGKDILKFHG 265

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWPAFL++A L  PK +F H      GEK+SKS GNV+ P +  ++   + LRYFL+R+
Sbjct: 266 IYWPAFLIAAGLEPPKTLFCHSHWTVDGEKMSKSRGNVVSPFDAAQQFTTEGLRYFLLRD 325

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESD 387
                D  Y  + +   +N++LA+ +GNLVSR    ++ +    IP+   +     +E  
Sbjct: 326 SVPHNDSNYSTERVLNILNSELADTLGNLVSRCTGKVV-NPKSEIPSAAIYAKELKSEPA 384

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--- 444
           E++      + +  +++ ++  +H A+  V+S +   +   +  KPW L+K  PD     
Sbjct: 385 ETLRKSMESLGEITKQHYESFYVHHAIDAVMSTLRSANIMIEHHKPWVLRK-EPDNEIAI 443

Query: 445 ---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
               +V+ + +E  R  AI L   VPKL+  + D L V +  R ++
Sbjct: 444 TELKSVIALALEATRISAIALYPVVPKLSCNLLDFLNVPNNARLWK 489


>gi|196228014|ref|ZP_03126881.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227417|gb|EDY21920.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 545

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 280/503 (55%), Gaps = 34/503 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  +I+TAI Y N  PHIGHAYE ++ADVLARFHRL G DV F TG D+HGQK+ ++A+ 
Sbjct: 3   ETFFITTAIDYTNGAPHIGHAYEKVLADVLARFHRLKGEDVFFLTGVDQHGQKVQQSAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI-SDKGD----- 118
             V  + FVD  +  F  +   L++ YD +  TT+ +H    R + +++  DKG+     
Sbjct: 63  QSVEPQQFVDGITAKFLALWKKLEVEYDGWAATTDPKHKQCVRAILQRLWDDKGEDGQSK 122

Query: 119 -IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +YK    G+YS+R E +  D E  +G DG+ +  +   V++ EEE ++FRL  ++  LL
Sbjct: 123 WLYKKSAGGYYSVRQEQFLTDKE--RGPDGE-FGPEWGQVEFREEENFYFRLLPHKQWLL 179

Query: 178 SYYESHPE----FILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDD--PQYIMY 229
              ++  +     ++P  R  E+ + V+    DL +SR      WGI  P+     ++ +
Sbjct: 180 DLIDARSKAGQPLVVPDFRVAELRNAVEKLEGDLCISRPDTRLKWGIPFPESFGAGFVTF 239

Query: 230 VWIDALTNYLTTTGYLD----NPDGSKAKFWPADLHVIGKDIL-RFHAIYWPAFLLS--- 281
           VW DAL NY++     D     P     ++W   +HVIGKDIL   H +YWP  L +   
Sbjct: 240 VWFDALVNYISFAPDYDPTAARPSEKFLQYWRNIVHVIGKDILIPAHGVYWPIMLKAIGF 299

Query: 282 ANLPLPKKVFSHGFILHKG-----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A+  +P  +  HG+   KG     EK+SK+LGNV+DP  + ++ G +A+RY+L+ +IA G
Sbjct: 300 ADEEIP-TLLVHGWWNIKGKGGESEKMSKTLGNVVDPDLLADKYGAEAVRYYLMSDIATG 358

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  + ++ L +R N DLAN +GNL++R+++M+ K  +G++    A  +S E        
Sbjct: 359 KDSDFSEERLIQRFNTDLANSLGNLLNRTLNMVAKYREGILKRTDADAQSPEFAREGVEA 418

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEV 454
            +  I       L+H A+ + I++    ++  DA+KPW L K  T  +R   VLY   E 
Sbjct: 419 YVSNINPANAEPLLHHAIDRAINIAVACNQSIDAEKPWALAKDATQAERLDAVLYRLAES 478

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +R  AILL   +PK A+ IFD L
Sbjct: 479 LRITAILLSPVLPKSAHGIFDQL 501


>gi|320592228|gb|EFX04667.1| methionyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 630

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 187/556 (33%), Positives = 286/556 (51%), Gaps = 72/556 (12%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N+ PH+GH Y M++ADVL R+  L G   L  TGTDEHG K+ +AA  AGV
Sbjct: 48  YVTTPIFYVNSDPHVGHMYSMVLADVLKRWQTLQGRRALLCTGTDEHGMKVQQAATRAGV 107

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K F D+N+  F D+A    ++ D FIRTT+  H    R +W+++  +G +Y+  + GW
Sbjct: 108 APKQFCDENAAVFADLARRAQLANDFFIRTTDSDHVAAVRAIWRRLRRRGYVYQTKHQGW 167

Query: 128 YSLRDEAYYNDDEVYK---GADGQ---YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           Y + DE +Y +  V K    A G+           V+W EE  Y FR++A +D+LL  Y 
Sbjct: 168 YCVSDETFYPEALVEKRIAAATGRVEMVSTETGKTVEWTEEINYHFRMTAVRDRLLQLYA 227

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           + P+F++P  R  EV+ +V + L+DLS+SR      WG+ +P+D    +YVW+DAL NYL
Sbjct: 228 ARPDFVVPAARMAEVVHWVTNQLEDLSISRPASRLTWGVAVPEDASQTIYVWVDALVNYL 287

Query: 240 TTTGYLDNPDGS---------------------------------------KAKFWPADL 260
           T  GY D  +G                                        +A  WPAD+
Sbjct: 288 TKAGYPDRWEGGEEGDADQGQVRAVASSNSSSYPQAVSSSSVPTPEQRQRQEAGGWPADV 347

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            V+GKDI+RFHA+YWPA LL+ +LP+P+++ SH       +K+SKS GNV++P   ++  
Sbjct: 348 QVMGKDIVRFHAVYWPALLLALDLPVPRQLLSHAHWTLGRKKMSKSDGNVVNPFYAMDRF 407

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-----DG 375
           GVDA+RY+LV +    +D  Y  + + +R    L  G+GNL+ R +     +      + 
Sbjct: 408 GVDAMRYYLVYDGGVEQDADYGNEHIVERYKKGLQGGLGNLLGRIMRTTRWNVREAVEEA 467

Query: 376 MIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQK 432
                      + S+ +  S +  +  +     ++L  R AL  V+ LV + +R+     
Sbjct: 468 TAAGKAGMAAPEPSLETQASAIDGIAAVAAGHMDRLDARGALRAVMGLVYQTNRFVHENA 527

Query: 433 PWELKKTNPD---------------RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L +T                  R   V+++  E +R ++ILLQ  +P  A ++ D+L
Sbjct: 528 PWTLARTADVADEAGAVDVAAADRLRMRQVVFLAAEALRVVSILLQPVMPAKAAEVLDVL 587

Query: 478 FVADENRCFQSLDQRL 493
            VA   R FQ  D RL
Sbjct: 588 GVASGRRTFQ--DARL 601


>gi|170595342|ref|XP_001902341.1| methionyl-tRNA synthetase [Brugia malayi]
 gi|158590031|gb|EDP28810.1| methionyl-tRNA synthetase, putative [Brugia malayi]
          Length = 468

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 167/448 (37%), Positives = 246/448 (54%), Gaps = 24/448 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV-----LFTTGTDEHGQKI 58
           R K +I+T I Y N  PHIGH Y  ++ADV  R+  L G DV     LFTTGTDEHG KI
Sbjct: 20  RLKHFITTPIFYANGPPHIGHLYTALLADVSNRWKLLKGGDVDLNNSLFTTGTDEHGLKI 79

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            + A  AG   + + D  S  F+D+     I  +DFIRTTE RH +  + +WK++  +G 
Sbjct: 80  QQTATTAGCDPQRYCDDISDKFKDLFRAFGIQPNDFIRTTETRHKEVVKHVWKELDKRGL 139

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYK--GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           I +G + GWYS  DE +Y +DEV K  G       +  + V+W++EE Y F L  Y   +
Sbjct: 140 IQRGKHEGWYSTVDECFYANDEVEKLDGQTSAVSKSTGSVVEWVQEENYIFPLFKYLGAV 199

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
            ++  S+ + I P     E +    S  +DLSLSR  K   WGI +P+D    +YVW DA
Sbjct: 200 RNWL-SNCDVIRPKVYFPEALQHA-SVERDLSLSRDRKRVTWGIAVPNDESQTIYVWFDA 257

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT +G   N    K+  WP    ++GKDIL+FHA+ WPAFLL+ +LPLPK++F H 
Sbjct: 258 LVNYLTVSGVFSN---KKSSIWPPTCQIVGKDILKFHAVIWPAFLLALDLPLPKRIFVHS 314

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
             L  G K+SKS+GNV+DP    + +  + LRYFL+R+     D  +        VN DL
Sbjct: 315 HWLVDGVKMSKSIGNVVDPFTASKSLSEEGLRYFLLRQGTPQNDANFTMLKAVNVVNTDL 374

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI-------RENMQN 407
            N +GNL+ RS    +   +     P   ++S  ++L +   +++ I        E    
Sbjct: 375 INNVGNLLQRST---IGKLNPSQTYPAFHSDSFRNLLELGEPLIESINCLTEVYEEQFDE 431

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +I++AL  ++ ++ + + +F   +PW+
Sbjct: 432 LMIYKALELLMDVMRQTNGFFQFYEPWK 459


>gi|294659967|ref|XP_462418.2| DEHA2G20130p [Debaryomyces hansenii CBS767]
 gi|199434368|emb|CAG90928.2| DEHA2G20130p [Debaryomyces hansenii]
          Length = 589

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/532 (33%), Positives = 272/532 (51%), Gaps = 56/532 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAKAAQNA 65
            YI++ I Y NA+PH+GH Y M++ D   R+ +LD      F TGTDEHG KI  AA+  
Sbjct: 25  FYITSPIFYVNARPHLGHLYSMLLCDTRNRWEKLDPNKSSFFLTGTDEHGLKIQTAAEKL 84

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K   DQ S NF+++   ++I+YD FIRTT++ H  T +  W  + +KG +Y+G +S
Sbjct: 85  GMTPKDLTDQVSTNFKNLGQKVNIAYDRFIRTTDEDHVKTVQYFWSVMEEKGFLYQGSHS 144

Query: 126 GWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           GWY++ DE +Y   ++ +      G          N V + EE  YFFRLS +QD+L+++
Sbjct: 145 GWYAVSDETFYPATQIEEMVDPTTGEKKMISKETKNEVVYQEETNYFFRLSHFQDRLIAF 204

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
            ES+P+FI P  +  E++    ++ L DLS+SR +    WGI++P D    +YVW DAL 
Sbjct: 205 LESNPDFIKPKSKYTELLRELTENKLTDLSVSRPSSRLTWGIEVPGDSSQKIYVWFDALL 264

Query: 237 NYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           NY+T  G+ +       K+       WPA  H+IGKDI+RFH IYWP FL++A + +P++
Sbjct: 265 NYITACGFPEKFPIVNEKYQTEPSNMWPA-THIIGKDIIRFHCIYWPIFLMAAGIDMPRQ 323

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           V  H   L  G K+SKSLGNV+DP+E ++  G DALR+FL        D  Y++      
Sbjct: 324 VVVHSHWLCDGFKMSKSLGNVVDPLETLDYYGEDALRFFLTEYSNIESDCNYNEQYF-YL 382

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVC-------------- 394
              +L     NL++R         + +     G F   D  I   C              
Sbjct: 383 TRENLIGKYANLITRCGGNAFNILESVKSFQAGEFDNIDVLIRDHCLNNEKTNESKQIIA 442

Query: 395 -SRVLQEIRENMQNQL--------IHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRA 444
               L EI  N+   +          R + +  + + + ++ F   +PW   K+   D  
Sbjct: 443 LKNELSEILNNLYTSMDMSMSSFDQMRTIQKWWAPLEKANQLFQLGQPWLYTKSLKSDTV 502

Query: 445 ST------------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           S              +++  E  R  +IL+   +P L++KI D L V+ +NR
Sbjct: 503 SDDDKEIHKLIQNYYVFMAAETSRICSILINPIIPNLSSKILDRLAVSPQNR 554


>gi|3998|emb|CAA32778.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 575

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/522 (33%), Positives = 276/522 (52%), Gaps = 49/522 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G 
Sbjct: 16  HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75

Query: 68  -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + G
Sbjct: 76  DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYIYMGEHKG 135

Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WYS+ DE +Y + +V K    DG+Y N +  N V +  E  YFFRLS +  K++ +   +
Sbjct: 136 WYSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195

Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           P+FI P  +R++++  +++G  L DLS+SR +    WGI  P+DP   +YVW DAL NYL
Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255

Query: 240 TTTG----------------YLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           ++ G                Y D  N  G     +P +     +HVIGKDI +FH +YWP
Sbjct: 256 SSIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +FLL+A LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      
Sbjct: 316 SFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382
           +DG + +  L +     L +  GNL++R            M   D     +  +      
Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPI 434

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +E  E++  + ++  +   E +      + L  V S++++ +      KPWE +    D
Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +   ++++ +E  R L+IL Q+ +P L+    D + V+ E R
Sbjct: 492 QQDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533


>gi|6321610|ref|NP_011687.1| Msm1p [Saccharomyces cerevisiae S288c]
 gi|1711640|sp|P22438|SYMM_YEAST RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1323302|emb|CAA97197.1| MSM1 [Saccharomyces cerevisiae]
 gi|285812366|tpg|DAA08266.1| TPA: Msm1p [Saccharomyces cerevisiae S288c]
          Length = 575

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/522 (33%), Positives = 276/522 (52%), Gaps = 49/522 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G 
Sbjct: 16  HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75

Query: 68  -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + G
Sbjct: 76  DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYIYMGEHKG 135

Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WYS+ DE +Y + +V K    DG+Y N +  N V +  E  YFFRLS +  K++ +   +
Sbjct: 136 WYSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195

Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           P+FI P  +R++++  +++G  L DLS+SR +    WGI  P+DP   +YVW DAL NYL
Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255

Query: 240 TTTG----------------YLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           ++ G                Y D  N  G     +P +     +HVIGKDI +FH +YWP
Sbjct: 256 SSIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +FLL+A LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      
Sbjct: 316 SFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382
           +DG + +  L +     L +  GNL++R            M   D     +  +      
Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPI 434

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +E  E++  + ++  +   E +      + L  V S++++ +      KPWE +    D
Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +   ++++ +E  R L+IL Q+ +P L+    D + V+ E R
Sbjct: 492 QQDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533


>gi|50290389|ref|XP_447626.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526936|emb|CAG60563.1| unnamed protein product [Candida glabrata]
          Length = 584

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 172/524 (32%), Positives = 281/524 (53%), Gaps = 54/524 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQ-NA 65
           +++T I YPNA+PH+GH Y  ++ D+  R+  L+G    LFTTGTDEHG KI  AA+ N 
Sbjct: 32  HVTTPIFYPNAKPHLGHLYSSLLCDIYHRWQVLNGDSAALFTTGTDEHGLKIQLAAEKNN 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + K FVD+    F ++    DISY  FIRTT+  H +  ++LW    + G IYKG + 
Sbjct: 92  CESPKAFVDKLYPEFVELDKTYDISYTRFIRTTDPDHIENVKLLWNLCLENGYIYKGKHE 151

Query: 126 GWYSLRDEAYYNDDEVYKGADG--QYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           GWYS+ DE +Y   +V K  +   +Y N +  N V    EE Y+F+LS++++KL+++   
Sbjct: 152 GWYSISDETFYPSSKVIKDPNNPNKYINTESLNEVIHQSEENYYFKLSSFKEKLINHITE 211

Query: 183 HPEFILPIERRNEVISFVKSG---LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
            P+F+ P  +R++++  +K+     KD+S+SR      WGI++P+DP   +YVW DAL N
Sbjct: 212 FPDFVHPPSKRDQILRDLKNDPNITKDISISRPATRLQWGIEVPNDPSQKVYVWFDALCN 271

Query: 238 YLTTTGYLDNPDGSK------------------AKFWPADLHVIGKDILRFHAIYWPAFL 279
           Y+++ G ++    +K                     W   +HVIGKDI +FH I+WP+FL
Sbjct: 272 YISSIGGIEAVKQNKRALSNHILGNSDITVYQPTNVWKDTVHVIGKDIEKFHIIFWPSFL 331

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+ANLPLPK++  H   L  G K+SKSLGNV++P+++    G D +R+FL+      +DG
Sbjct: 332 LAANLPLPKQIVVHSHWLCNGFKMSKSLGNVVEPMKISSHYGTDMVRWFLMENSKVEEDG 391

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSM-----------------ILKDYDGMIPTPGA 382
            + ++ L         +  GNL++R                     +L D++ +      
Sbjct: 392 DFQEEKLFATTEL-FVSKWGNLINRCCGAKFNIERSVHKYARNSEEVLADFEKIYIDNDM 450

Query: 383 FTESDESILSVCSRVLQEIR--ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
             ++   I  V   +L   +  E  Q  L+   +  +  +++  +  F   +PW   K  
Sbjct: 451 IIQARSLIQDVDQLILNAGKYYEKFQYNLL---IKDIWKIINSTNSLFQYAEPW---KKL 504

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            ++   ++++  ++ R LAIL Q  +P+L++K+ D L V  E R
Sbjct: 505 GEQQDIIIFLCADISRVLAILTQPIIPQLSHKLLDHLKVDQERR 548


>gi|151943449|gb|EDN61760.1| mitochondrial methionyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190406813|gb|EDV10080.1| methionine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207345027|gb|EDZ71977.1| YGR171Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272049|gb|EEU07062.1| Msm1p [Saccharomyces cerevisiae JAY291]
 gi|259146676|emb|CAY79933.1| Msm1p [Saccharomyces cerevisiae EC1118]
 gi|323337473|gb|EGA78721.1| Msm1p [Saccharomyces cerevisiae Vin13]
 gi|323348442|gb|EGA82687.1| Msm1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354852|gb|EGA86685.1| Msm1p [Saccharomyces cerevisiae VL3]
          Length = 575

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 176/522 (33%), Positives = 276/522 (52%), Gaps = 49/522 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G 
Sbjct: 16  HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75

Query: 68  -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + G
Sbjct: 76  DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVVKLWELCLKNGYIYMGEHKG 135

Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WYS+ DE +Y + +V K    DG+Y N +  N V +  E  YFFRLS +  K++ +   +
Sbjct: 136 WYSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195

Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           P+FI P  +R++++  +++G  L DLS+SR +    WGI  P+DP   +YVW DAL NYL
Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255

Query: 240 TTTG----------------YLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           ++ G                Y D  N  G     +P +     +HVIGKDI +FH +YWP
Sbjct: 256 SSIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +FLL+A LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      
Sbjct: 316 SFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382
           +DG + +  L +     L +  GNL++R            M   D     +  +      
Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPI 434

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +E  E++  + ++  +   E +      + L  V S++++ +      KPWE +    D
Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +   ++++ +E  R L+IL Q+ +P L+    D + V+ E R
Sbjct: 492 QQDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533


>gi|238809991|dbj|BAH69781.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 516

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 172/492 (34%), Positives = 271/492 (55%), Gaps = 21/492 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  YI+T I Y +   HIGH Y  I+A V+  + R+ G D    TG+DEHGQKI +
Sbjct: 3   MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQE 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A    K +VD   +++++M    +I YD F RTTE  H    + ++     KG IY
Sbjct: 63  KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 122

Query: 121 KGCYSGWYSLRDEAYYNDDE-VYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           KG Y G YS++DE +   ++ VYK  DG+YY+  ++H  +  MEEE YFF+++  Q    
Sbjct: 123 KGSYQGLYSVQDEEFLTKNQAVYK--DGKYYHPSSKHELIN-MEEESYFFKMNEVQKWWS 179

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            Y + HP+F+LP +  NE+  +FVK GL+DLS++R    W I   DDP++ +YVW DAL 
Sbjct: 180 KYNKKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALF 239

Query: 237 NYLTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           NY+T  G+  + P     K+W      +H++GK+I RFH IYWP  L    + LP  + S
Sbjct: 240 NYITKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVS 299

Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           HG +  K G K+SKSL NVI P  + ++   + ++Y+   +I  G+DG + ++ LK+ VN
Sbjct: 300 HGLLRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409
           ADL N  GNLVSR++ MI   +    P    ++ + + I     + ++      Q  +  
Sbjct: 360 ADLINNYGNLVSRTLKMIHNSF----PKGLLYSVNSKKIHKDIEKEIKNFSAQFQKHMDA 415

Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I +   + I L +++++Y D   PW+L     +    +L   +  I  ++  LQ  +P
Sbjct: 416 FEIDKGFKKAIELSAKLNKYIDETTPWKL-TDKLEELEPILVRLLNGIYAVSCALQIVLP 474

Query: 468 KLANKIFDILFV 479
               ++  +L V
Sbjct: 475 TKIKEVASVLKV 486


>gi|153005950|ref|YP_001380275.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5]
 gi|152029523|gb|ABS27291.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5]
          Length = 524

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 246/439 (56%), Gaps = 12/439 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y++T+I Y NA PH+G A E+ +AD  AR  R  G  V F TGTD+H  K   AA+
Sbjct: 6   QETSYVTTSIPYVNANPHLGFALELCVADAFARHRRARGRRVRFVTGTDDHSLKNVIAAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKG 122
            AGV T  +V  ++  F  +   L IS ++F RT+    H    R LW+  + +GD+Y+ 
Sbjct: 66  RAGVPTAQWVADHAAAFEALNGALGISANEFQRTSASPAHGPAVRALWEACARRGDLYRR 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E +Y  +E+  G   ++      P++ +EE  +FFRLS + D +    ES
Sbjct: 126 PYRGQYCVGCERFYEPEELANGRCPEH----DAPLETIEETNWFFRLSRHADVVREAIES 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
               I+    R E ++F++  ++D+S+SR   +   WG+ +P DP  +++VW DAL  YL
Sbjct: 182 GRLRIVHEGAREETLAFLRGPVRDISVSRSAARARGWGLPVPADPSQVVWVWFDALCGYL 241

Query: 240 TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
              GY     G    FW  D   +HVIGK I RFHA+YWPAFL SA LP P  +  HG++
Sbjct: 242 AALGYGGIDAGLLDAFWCGDGERVHVIGKGIARFHAVYWPAFLESAGLPWPTDLLVHGYV 301

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +GEKISKS G  IDP  +I E G DA+RYFL+R I   +DG +     ++  +A+LAN
Sbjct: 302 TVEGEKISKS-GRTIDPAPLIAEYGADAVRYFLLRHIRTARDGDFSIARFRQAHDAELAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G+GNL SR ++++ K  +G++P PG     DE +     ++  E+ + +    +  AL+ 
Sbjct: 361 GLGNLASRILALVAKLTNGLVPAPGVELARDEDLRREALKLPSEVDDAVDRLSLDGALSA 420

Query: 417 VISLVSEVDRYFDAQKPWE 435
           +  LV   +R+     PWE
Sbjct: 421 IFRLVDATNRFLTIAAPWE 439


>gi|319777619|ref|YP_004137270.1| methionyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038694|gb|ADV34893.1| Methionyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 514

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 172/492 (34%), Positives = 271/492 (55%), Gaps = 21/492 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  YI+T I Y +   HIGH Y  I+A V+  + R+ G D    TG+DEHGQKI +
Sbjct: 1   MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A    K +VD   +++++M    +I YD F RTTE  H    + ++     KG IY
Sbjct: 61  KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE-VYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           KG Y G YS++DE +   ++ VYK  DG+YY+  ++H  +  MEEE YFF+++  Q    
Sbjct: 121 KGSYQGLYSVQDEEFLTKNQAVYK--DGKYYHPSSKHELIN-MEEESYFFKMNEVQKWWS 177

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            Y + HP+F+LP +  NE+  +FVK GL+DLS++R    W I   DDP++ +YVW DAL 
Sbjct: 178 KYNKKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALF 237

Query: 237 NYLTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           NY+T  G+  + P     K+W      +H++GK+I RFH IYWP  L    + LP  + S
Sbjct: 238 NYITKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVS 297

Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           HG +  K G K+SKSL NVI P  + ++   + ++Y+   +I  G+DG + ++ LK+ VN
Sbjct: 298 HGLLRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409
           ADL N  GNLVSR++ MI   +    P    ++ + + I     + ++      Q  +  
Sbjct: 358 ADLINNYGNLVSRTLKMIHNSF----PKGLLYSVNSKKIHKDIEKEIKNFSAQFQKHMDA 413

Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I +   + I L +++++Y D   PW+L     +    +L   +  I  ++  LQ  +P
Sbjct: 414 FEIDKGFKKAIELSAKLNKYIDETTPWKL-TDKLEELEPILVRLLNGIYAVSCALQIVLP 472

Query: 468 KLANKIFDILFV 479
               ++  +L V
Sbjct: 473 TKIKEVASVLKV 484


>gi|145605679|ref|XP_370452.2| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15]
 gi|145013476|gb|EDJ98117.1| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15]
          Length = 748

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/440 (35%), Positives = 249/440 (56%), Gaps = 22/440 (5%)

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   D NS  F D+A+   I  D FIRTT+  H +  +  W ++ D+G IY+  + G
Sbjct: 1   MTPKQLCDANSEVFLDLAEKAGIDNDFFIRTTDPDHKEAVQYFWDRLWDRGYIYEATHKG 60

Query: 127 WYSLRDEAYYNDDEVYKGAD---GQYYNAQH---NPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WY + DE +Y +  + K  D   G+ + A     N V+WMEE+ Y FRL+A +D+LL ++
Sbjct: 61  WYCVSDETFYPESTIEKRKDPMTGEVFLASKETGNAVEWMEEKTYHFRLTALKDRLLKFF 120

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
           E +PE+I+P  R  EV+ +V++ L+DLS+SR T   DWGI++P+D    +YVWIDAL NY
Sbjct: 121 EENPEWIVPAPRMKEVVDWVENSLEDLSVSRPTSRLDWGIRVPNDESQTIYVWIDALVNY 180

Query: 239 LTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T  GY    P+  +   WPAD+H+IGKDI+RFH +YWPA L++ +LPLP+++ +H    
Sbjct: 181 VTKAGYPYWTPETVQKDGWPADIHIIGKDIVRFHCVYWPALLMALDLPLPRRILTHSHWT 240

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKSLGNV++P   ++  GV+ +RYFL+      +D  YD   L       L  G
Sbjct: 241 LGGKKMSKSLGNVVNPFLAMDRFGVEVIRYFLISNGRLLQDASYDNKILVDIYKRQLQGG 300

Query: 358 IGNL---VSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIH-- 411
           +GNL   V RS    +++        G  T S+ E   S   + L ++   + +      
Sbjct: 301 VGNLLGRVMRSKKWNVREIVERCSKEGRPTNSNVEPKYSSFEQRLFQLPGTVVDAFGELD 360

Query: 412 --RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQA 464
              AL  +  + +E +++     PW +   N   A+     + +Y+  E +R + ILLQ 
Sbjct: 361 PGAALRSIADMATETNKFITDCAPWSVTNENDADAAELNVRSCIYLCAESLRIMGILLQP 420

Query: 465 FVPKLANKIFDILFVADENR 484
           FVP  ++++ D+L V + +R
Sbjct: 421 FVPNKSSELLDMLGVKETHR 440


>gi|323308936|gb|EGA62167.1| Msm1p [Saccharomyces cerevisiae FostersO]
          Length = 575

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 173/522 (33%), Positives = 274/522 (52%), Gaps = 49/522 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G 
Sbjct: 16  HVTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGF 75

Query: 68  -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + G
Sbjct: 76  DQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHVENVVKLWELCLKNGYIYMGEHKG 135

Query: 127 WYSLRDEAYYNDDEVYKGA--DGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WYS+ DE +Y + +V K    D +Y N +  N V +  E  YFFRLS +  K++ +   +
Sbjct: 136 WYSISDETFYPESKVIKDPKNDDKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKN 195

Query: 184 PEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           P+FI P  +R++++  +++G  L DLS+SR +    WGI  P+DP   +YVW DAL NYL
Sbjct: 196 PDFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYL 255

Query: 240 TTTGYL------------------DNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           ++ G +                   N  G     +P +     +HVIGKDI +FH +YWP
Sbjct: 256 SSIGGIPSILSNATEVVSRHHSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +FLL+  LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      
Sbjct: 316 SFLLATGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLE 375

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVS---------MILKD-----YDGMIPTPGA 382
           +DG + +  L +     L +  GNL++R            M   D     +  +      
Sbjct: 376 EDGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPT 434

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +E  E++  + ++  +   E +      + L  V S++++ +      KPWE +    D
Sbjct: 435 VSERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWEREL---D 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +  T++++ +E  R L+IL Q+ +P L+    D + V+ E R
Sbjct: 492 QQDTIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKR 533


>gi|71894319|ref|YP_278427.1| methionyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851107|gb|AAZ43716.1| methionyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 518

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 253/448 (56%), Gaps = 18/448 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y   +A V+  + +L G +  F TG+DEHG KIA+ A+
Sbjct: 2   KKNFYITTPIYYASGNLHIGHLYTTTLAWVIRNYQKLLGNETKFLTGSDEHGSKIAQKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              ++   FV+  +  F+++ +  DI+YD FIRTT + H  T + ++        IYK  
Sbjct: 62  ENNLSEIEFVNSVAAKFKELWNSYDINYDIFIRTTSENHKKTAQKIFSYFYKNNYIYKNN 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+G YS+  E +    +  +     Y+   H+ +  + EE YFF++S +   L  Y+  +
Sbjct: 122 YTGLYSVSAEEFLTKSQALEKNGKYYHPVSHDELIEVSEESYFFKMSEFSPWLKKYFAEN 181

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             F+ P +  NE++ +F+K+GL+DLS++R    W I I +D  + +YVW+DAL+NY++  
Sbjct: 182 SNFLFPKKIENEILNNFIKNGLQDLSVTRTNVSWAIPIKEDLNHTLYVWVDALSNYISAL 241

Query: 243 GY---LDNPDGSK--AKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           GY   LD    S+    FW       +H+IGK+I RFH IYWP FL + NL  P  + +H
Sbjct: 242 GYNPELDYDSQSEDFKNFWENPNSKVVHLIGKEIARFHMIYWPIFLKALNLKQPTNIVAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL    K+SKS GNV+DP E++ +   + ++YFL  +I  G DG +D+  L   +NA+
Sbjct: 302 GWILANDGKMSKSKGNVVDPNELLLKFDKEQIKYFLASQIPMGNDGVFDEKLLVDSINAN 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQ---EIRENMQNQL 409
           + N  GNL+SRS+ M    Y      P  ++++ E   L +  ++L+   + +++M   L
Sbjct: 362 IINSYGNLISRSLKM----YANSFSVPLKYSKNTEKDFLEIEEKILKSKVDFKKHMDLYL 417

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELK 437
           + +A      L S+++++ D + PW LK
Sbjct: 418 VDKAFEVARELASDLNKFIDIKMPWTLK 445


>gi|148377472|ref|YP_001256348.1| methionyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291518|emb|CAL58904.1| Methionyl tRNA synthetase (Methionine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 515

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 167/485 (34%), Positives = 275/485 (56%), Gaps = 20/485 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y   +  ++A + ++ G DV F TG+DEHGQKI + A 
Sbjct: 2   KKTFYITTPIYYTSGPLHIGHLYCTTVTWIIANYKKILGFDVKFLTGSDEHGQKIEQKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A    + + D+   +++ M    +I+YD F RT++ +H    + ++ K  + G IYKG 
Sbjct: 62  AANKDPQTYADELVDSYKKMWQKYNINYDYFSRTSDPKHMKMVQAIFSKFLELGFIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G YS+ DE +   ++     DG+YY+    + +  M EE YFF++  +Q+  L   E+
Sbjct: 122 YDGLYSVNDEEFLTKNQAVL-KDGEYYHPVSGHKLVLMSEESYFFKMKEFQNWWLKEVEN 180

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PE++LP +  NE+I+ FV  GL+DLS++R   +WGIK  +DP++ +YVW+DAL NY++ 
Sbjct: 181 NPEWLLPAKMTNEMITNFVSEGLEDLSVTRTNINWGIKTNEDPKHTLYVWLDALFNYVSA 240

Query: 242 TGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
            G+ L+NP     K+W      +H+IGK+I RFH IYW  F  +  + +P K+++HG + 
Sbjct: 241 LGFDLENPSDEYLKYWQNGDEIVHIIGKEISRFHFIYWTIFTKALGIRIPTKIYAHGLLR 300

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSL NVI+P  +  +   + ++Y+    I+ G+DG + +D L   +N++L N
Sbjct: 301 DKNGRKMSKSLNNVIEPEYLFSKYDDEMIKYYFASAISFGEDGNFSEDKLIDIINSELVN 360

Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHR 412
             GNLVSR+V MI     +G+I    +     E +E I S  S+ +    E M    + +
Sbjct: 361 NYGNLVSRTVKMISNSSPEGLIYRQSSKIEHLEIEEKINSFSSKFI----ELMDEFRLDK 416

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL   ++L   +++Y D  KPW L    + +    +L   +  I  ++  LQ  +P   N
Sbjct: 417 ALEYSMNLSDALNKYIDMLKPWTLTAHEHKEELENILVRLLNGIYAVSWSLQIVMP---N 473

Query: 472 KIFDI 476
           KI ++
Sbjct: 474 KITEV 478


>gi|305663645|ref|YP_003859933.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378214|gb|ADM28053.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 501

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 172/496 (34%), Positives = 261/496 (52%), Gaps = 26/496 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M     +Y++T I YPN +PH+GHAY  I+AD++AR+  L G +    TGTDEHG K+ +
Sbjct: 1   MNRNRYVYVTTPIYYPNDKPHLGHAYTTILADIIARWFYLQGYNTFLLTGTDEHGLKLQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   K FVD+ S  FR   DVL I Y+ FIRTT+K H +  + +  K+ +KG IY
Sbjct: 61  EAEKRGKDPKTFVDEMSSIFRSYWDVLGIGYNRFIRTTDKDHEELVKYVLNKLLEKGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +G YSGWY    E +Y++ E     +         P++++EE+ YF R+S ++D +L   
Sbjct: 121 RGRYSGWYCSGCEKFYSEKEYIIENNTPICPIHKRPLEFIEEDTYFLRISEFRDYVLKIL 180

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
           +   + + P +   E+ S ++  GL+D+S++R      WGI++P DP Y +YVWIDAL N
Sbjct: 181 KEG-DVVYPKQYAIEIASKIELEGLQDISIARPKSRVYWGIELPFDPNYTLYVWIDALLN 239

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  GYL N +     +W   + +IGKDIL FH   W + L    +P P+K+  H ++ 
Sbjct: 240 YLTGIGYLKNIE-EFTNYWSGAIQLIGKDILWFHTAIWFSILAMLGIPPPRKLLVHAYLT 298

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG------LKKRVN 351
            KG K+ KSLGNVI   + I+  G   +  F++  IA      YDKD            N
Sbjct: 299 VKGHKMGKSLGNVISIEDTIKRYGNPEVVRFIIARIAN-----YDKDTEVSWEIYDSIYN 353

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            DL N  GNLV R   +  +  +G +       + DE  +     +  +  EN  N  I 
Sbjct: 354 NDLLNNYGNLVRRVAVLAKRYINGNVE-----RDLDEQFVRDIDELKNKAIENYNNLNIS 408

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+   + +    + Y + ++PW  K+ NP +    +Y  +E IR  ++LLQ  +P    
Sbjct: 409 EAIKYTLDIAHNTNSYLNRREPW--KEANPMKT---IYTALEAIRITSLLLQPVMPNTIK 463

Query: 472 KIFDILFVADENRCFQ 487
            I ++L V  E    Q
Sbjct: 464 TILNMLGVEIERNIKQ 479


>gi|291320134|ref|YP_003515392.1| methionyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752463|emb|CBH40435.1| Methionyl tRNA synthetase (Methionine tRNAligase) [Mycoplasma
           agalactiae]
          Length = 530

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 168/485 (34%), Positives = 276/485 (56%), Gaps = 20/485 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y   +A + A + ++ G DV F TG+DEHGQKI + A 
Sbjct: 2   KKTFYITTPIYYTSGPLHIGHLYCTTVAWIFANYKKILGYDVKFLTGSDEHGQKIEQKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A    + +VD+   +++ M    +I+YD F RT++ +H    + ++ K  + G IYKG 
Sbjct: 62  AANKDPQTYVDELVDSYKKMWQRYNINYDYFSRTSDPKHMKMVQSIFTKFLELGFIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G YS+ DE +   ++     DG+YY+    + +  M EE YFF++  +Q+  L   E+
Sbjct: 122 YDGLYSVNDEEFLTKNQAVL-KDGEYYHPVSGHKLILMSEESYFFKMKEFQNWWLKEVEN 180

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+++LP +  NE+I+ FV  GL+DLS++R   +WGIK  +DP++ +YVW+DAL NY++ 
Sbjct: 181 NPQWLLPAKMTNEMITNFVSEGLEDLSVTRTNINWGIKTNEDPKHTLYVWLDALFNYVSA 240

Query: 242 TGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
             + L+NP     K+W      +H+IGK+I RFH IYW  F  +  + +P K+++HG + 
Sbjct: 241 LDFDLENPSDEYLKYWQNGDEIVHIIGKEISRFHFIYWTIFTKALGIKIPTKIYAHGLLR 300

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSL NVI+P  +  +   + ++Y+    I+ G+DG + +D L   VN++L N
Sbjct: 301 DKDGRKMSKSLNNVIEPEYLFSKYDDEMIKYYFASAISFGEDGNFSEDKLIDIVNSELVN 360

Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHR 412
             GNLVSR+V MI   + +G+I    +     E +E I S  S+ +    E M    + +
Sbjct: 361 NYGNLVSRTVKMISNSFPEGLIYRQSSKIEHLEIEEKINSFSSKFI----ELMDEFKLDK 416

Query: 413 ALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL   ++L   +++Y D  KPW L    + +    +L   +  I  ++  LQ  +P   N
Sbjct: 417 ALEYSMNLSDALNKYIDILKPWTLTAHEHKEELENILVRLLNGIYAVSWSLQIVMP---N 473

Query: 472 KIFDI 476
           KI ++
Sbjct: 474 KIAEV 478


>gi|225449565|ref|XP_002279143.1| PREDICTED: similar to AT3g55400/T22E16_60 [Vitis vinifera]
          Length = 555

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 174/522 (33%), Positives = 260/522 (49%), Gaps = 75/522 (14%)

Query: 3   ERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ERE      ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA
Sbjct: 63  EREVSDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIA 122

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA   G +     D  S+ ++ +   LDI+YD FIRTT  +H    +  + ++      
Sbjct: 123 TAAAACGSSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVL----- 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                                    A+G  Y A +  +  +  E Y              
Sbjct: 178 -------------------------ANGDIYRADYEGLYCINCEEY-------------- 198

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                          +V S++KSGL+D S+SR + DWGI +P+D +  +YVW DAL  Y+
Sbjct: 199 ---------------KVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYI 243

Query: 240 TTTGYLDN--PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +     DN  PD   A    WPA LH+IGKDILRFHA+YWPA LLSA L LPK VF HGF
Sbjct: 244 SALSE-DNEQPDLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGF 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   G K+ KSLGN ++P ++++  G DA+RYF +RE+  G DG Y +D     VNA LA
Sbjct: 303 LTKDGMKMGKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N IGNL++R++ ++ K+    +           +      +++++ +   +N  +  A  
Sbjct: 363 NTIGNLLNRTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACE 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYVTVEVIRQLAILLQAFVPKLANK 472
            V+ + +  + Y D + PW L K     +      L + +E +R +AI L    P+L+ +
Sbjct: 423 AVLEIGNAGNLYIDERAPWSLFKQGAAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLR 482

Query: 473 IFDILFVADENRCFQSLDQR----LKPGFMLHKTFDPIFPRF 510
           I++ L    E     +  +     LK G ++ +   P+F R 
Sbjct: 483 IYEQLGYTKEQFNATTWSETEWGGLKSGQVMAQP-KPVFARI 523


>gi|308190251|ref|YP_003923182.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma
           fermentans JER]
 gi|307624993|gb|ADN69298.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma
           fermentans JER]
          Length = 514

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 268/492 (54%), Gaps = 21/492 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  YI+T I Y +   HIGH Y  I+A V+  + +  G D    TG+DEHGQKI +
Sbjct: 1   MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKKALGYDAKLLTGSDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A    K +VD   +++++M    +I YD F RTTE  H    + ++     KG IY
Sbjct: 61  KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 120

Query: 121 KGCYSGWYSLRDEAYYN-DDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           KG Y G YS++DE +   +  VYK  DG+YY+  ++H  +  MEEE YFF++   Q    
Sbjct: 121 KGSYQGLYSVQDEEFLTINQAVYK--DGKYYHPSSKHELIN-MEEESYFFKMKEVQKWWS 177

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            Y + HP+F+LP +  NE+  +FVK GL+DLS++R    W I   DDP++ +YVW DAL 
Sbjct: 178 EYNKKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALF 237

Query: 237 NYLTTTGY-LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           NY+T  G+  + P     K+W      +H++GK+I RFH IYWP  L    + LP  + S
Sbjct: 238 NYITKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVS 297

Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           HG +  K G K+SKSL NVI P  + ++   + ++Y+   +I  G+DG + ++ LK+ VN
Sbjct: 298 HGLLRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-- 409
           ADL N  GNLVSR++ MI   +    P    ++ + + I     + ++      Q  +  
Sbjct: 358 ADLINNYGNLVSRTLKMIHNSF----PKGLFYSVNSKKIHKDIEKEIKNFSAQFQKHMDA 413

Query: 410 --IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I +   + I L +++++Y D   PW+L     +    +L   +  I  ++  LQ  +P
Sbjct: 414 FEIDKGFKKAIELSAKLNKYIDETTPWKL-TDKLEELEPILVRLLNGIYAVSCALQIVLP 472

Query: 468 KLANKIFDILFV 479
               ++  +L V
Sbjct: 473 TKIKEVASVLKV 484


>gi|224098226|ref|XP_002194925.1| PREDICTED: similar to rCG22562 [Taeniopygia guttata]
          Length = 706

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 247/470 (52%), Gaps = 30/470 (6%)

Query: 46  LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
           L  +GTDEHG KI +AA  AG       ++ S  FR       ++Y DF RT+E RH   
Sbjct: 127 LSVSGTDEHGLKIQQAAAAAGTEPAELCERVSGLFRQALTQAGVAYTDFTRTSEPRHRRA 186

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNPVQWM 160
               W  + D G +YKG Y GWY   +E++  + ++ +G D Q    +      + V W 
Sbjct: 187 VGHFWGALRDGGVLYKGSYEGWYCTPEESFLPESQLAEGTDAQGRPCKVSLETGHEVHWT 246

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           +EE Y FRLSA++D L ++   +P  I P      V+ ++   L DLS+SR+     WGI
Sbjct: 247 KEENYMFRLSAFRDPLQNWLRDNPRAIFPDPFYQCVLRWLDEDLPDLSVSRERNRLQWGI 306

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            +P+DP   +YVW+DAL NYL+  GY +    S + +WPA  HV+GKDIL+FHA+YWPA 
Sbjct: 307 PVPNDPTQTIYVWVDALVNYLSVVGYPE----SHSAWWPAVHHVVGKDILKFHALYWPAL 362

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           LL+A L  P+++  H     +G+K+SKSLGNV+DP   + + GVD  RYFL+R+    +D
Sbjct: 363 LLAAGLEPPERILVHSHWTVRGQKMSKSLGNVVDPSVCVGQYGVDGFRYFLLRQGVPERD 422

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-------YDGMIPT---------PGA 382
             Y  + + K VN++LA+ +G L++RS +  +          +   P           G 
Sbjct: 423 CDYYDEKVMKLVNSELADALGGLLNRSTASSINPSNTYPRFSEPCFPKVLDSREARGTGR 482

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
               D  +++  + +  ++    +   I++AL  +   V + + +F   KPW+L + +  
Sbjct: 483 ACVEDYKLVAAVASLPAQVDSYFEGFQIYKALECIAQCVRQTNGFFQRHKPWKLDRRDAA 542

Query: 443 RA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 T+L+VT+E +R    LLQ  VP  A+K+   L V    R    L
Sbjct: 543 EQLWLDTILHVTLECLRVYGTLLQPVVPHTADKLLSRLAVGPGERDLSGL 592


>gi|170103074|ref|XP_001882752.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642123|gb|EDR06380.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 588

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 181/542 (33%), Positives = 270/542 (49%), Gaps = 66/542 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKA 61
           ++  Y++T I YPNA PHIGH Y +++ D+ AR+ R+      V F  GTDEHG KI +A
Sbjct: 38  KKPYYLTTPIFYPNAVPHIGHLYTLVLGDIFARYQRILDPTRPVHFLAGTDEHGLKIQQA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGV  K F D  S  FR++AD   ISY  ++RTT+++H      +W  +  KG IYK
Sbjct: 98  AEKAGVEPKSFCDSLSGKFRELADRARISYTVYMRTTQEQHKKAVEHVWLTLDRKGFIYK 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----------HNPVQWMEEEGYFFRLS 170
           G Y GWYS+ DE +Y D +V         +++            +PV+W  E+ Y FRLS
Sbjct: 158 GQYEGWYSITDECFYADAQVMPATLPSSSSSRGEKPAMISIETSSPVEWTTEQNYMFRLS 217

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------------LKDLSLS--RKTF 214
           A+++ L  +Y      + P    + V+  + S               L+D+S+S  R   
Sbjct: 218 AFREALEEHYREQKTEVHPPPYHSAVLKMLGSASSSTSSSADAPEPILQDISISRPRSRL 277

Query: 215 DWGIKIPDDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            WG+ +P DP  + MYVW DAL  YL+  GY  +  G     WPADL +IGKDILRFHA+
Sbjct: 278 SWGVPVPTDPLNHTMYVWFDALLVYLSGVGYPWSHLGPSIP-WPADLQIIGKDILRFHAL 336

Query: 274 YWPAFLLS---------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           Y PA L++                 LPL  K+ SH       +K+SKSLGNV DP+  + 
Sbjct: 337 YLPAILMALSSPSPPSSSPSPPPQKLPLSSKILSHAHWTVSRQKMSKSLGNVADPLAAMS 396

Query: 319 EVGVDALRYFLVREIACGK---DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
             GVD +RY+L   I  G+   D  +  + L K  + +L + +GN   R  S    +   
Sbjct: 397 TYGVDIVRYYLA--IVGGRFRDDVDWSPEQLTKH-SKELQSLLGNYFLRVTS----ERIS 449

Query: 376 MIPTPGAFTESDESI--------LSVCSRVL-QEIRENMQNQLIHRALAQVISLVSEVDR 426
            +  P   + + E+I        L + +R L  ++++ + N  +  AL ++I+L+   ++
Sbjct: 450 AVAQPATESNASETIEEPNPNRSLLLSARALPTQVQKALDNLEVGEALEEIIALLRLANK 509

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                 PW      P        V +E +R   I LQ F+P +A K+ D L V    R +
Sbjct: 510 TVTTIAPWS-ASCPPTNVYVTQLVALETLRITGICLQPFIPDVAEKLLDGLGVPAGERDW 568

Query: 487 QS 488
            S
Sbjct: 569 AS 570


>gi|12044871|ref|NP_072681.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660383|ref|ZP_05405792.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351165|sp|P47267|SYM_MYCGE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3844630|gb|AAC71237.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079081|gb|ABY79699.1| methionyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 512

 Score =  282 bits (721), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 171/515 (33%), Positives = 274/515 (53%), Gaps = 16/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y + +PHIGHA+  I+ADV+ RF   +G +     G+DEHG KI   A++
Sbjct: 2   KRCYITTPIYYASGKPHIGHAFTTILADVIKRFKIQNGYEAFLLVGSDEHGNKIESKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  K FVD N++ F+ M   L+IS+D FIRTT++ H    +  ++ + DK  IY+  +
Sbjct: 62  LNLDPKTFVDINAQAFKLMWKTLNISFDHFIRTTDEIHKQQVQKTFQDLYDKKLIYQSEW 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E  Y                 HN +  ++E  +F   S+ ++ + +    + 
Sbjct: 122 KGAYCVECEQNY----FTFNKQTMLCEIGHN-LSLVQEPCWFISFSSTKNWIETTIGKNQ 176

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
             I+P  R +E+  +F+ +GL DL+L+RK   WGIK+P DP   +YVW DAL +Y+T  G
Sbjct: 177 LNIIPKSRASELKNNFINNGLNDLALTRKNVTWGIKVPFDPNQTIYVWFDALFSYITNLG 236

Query: 244 YLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +  N D +  K+W  D      +H+I ++I RFH IYWP FL   ++ LP +  SHG+I+
Sbjct: 237 F-RNGDPNFIKWWNNDNKEREVIHLISREITRFHCIYWPIFLHLLDIKLPTQFLSHGWIV 295

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSL NVI P ++I++ GVD  RY L++E+   KD       LK+  NADLAN
Sbjct: 296 DGEGRKMSKSLNNVISPEQLIDQFGVDGTRYCLLKEMRLDKDNRCSVSILKEIYNADLAN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             GN VSR+  MI K  +G +        + + I+ +    + +      +   +RA+  
Sbjct: 356 SFGNHVSRTFGMIKKYLNGKLEYQIITDNALQKIMILIDESIVQFDHYFNSYEFYRAINL 415

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++ +V E+ +  D  KPWEL K         +L+  V  ++   +LL   +   A+K+F 
Sbjct: 416 LLKIVFELSKLIDDFKPWELFKNQEFSLLKQLLFTCVRCVQVCYVLLTPILVNTASKVFH 475

Query: 476 IL-FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +  F  D  R  Q  D  L    ++  + + +F R
Sbjct: 476 LFNFADDACRKDQLRDATLLKKIIISNSMEVLFKR 510


>gi|67526815|ref|XP_661469.1| hypothetical protein AN3865.2 [Aspergillus nidulans FGSC A4]
 gi|40739940|gb|EAA59130.1| hypothetical protein AN3865.2 [Aspergillus nidulans FGSC A4]
          Length = 528

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 167/494 (33%), Positives = 246/494 (49%), Gaps = 68/494 (13%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAG 66
           Y++T I Y NA PH+GH Y M++AD+L R+  L G  +    TGTDEHG K        G
Sbjct: 56  YVTTPIFYVNAAPHVGHLYTMVLADILKRWRTLTGDNEAQLLTGTDEHGMK--------G 107

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  ++                 ++Y +     E   H            +G IY   + G
Sbjct: 108 LLGEI-----------------VTYAE----QEMLQH------------RGYIYTSKHEG 134

Query: 127 WYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE +Y   +V        G            V+W  E  Y FRLSA+QD+LL  Y
Sbjct: 135 WYSVSDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLLELY 194

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
           ++  +FI P     +V+  V SGL DLS+SR  +   WGI +P+D    +YVW+DAL NY
Sbjct: 195 KT--DFITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDALVNY 252

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  H     
Sbjct: 253 LTKAGYPFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHAHWTM 312

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNV++P   I+  G+D +R+FL        D  YD   + +     L  G+
Sbjct: 313 NREKMSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQQGL 372

Query: 359 GNLVSRSVSMI---LKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           GN+  R++      L+DY      G  P     T  D++      ++  ++ + M+    
Sbjct: 373 GNIAHRTIGCAKGKLRDYIINATSGNSPA----TADDQAYQKTLEQLSHKVAKCMEALDP 428

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             AL +++ ++   ++YF   +PW+    NP+    V++   E +R + ILLQ F+P  A
Sbjct: 429 RAALEEIVEVILLTNKYFHNSEPWQ----NPEEKQRVIFNAAESMRIMGILLQPFMPNKA 484

Query: 471 NKIFDILFVADENR 484
            K+ DIL V    R
Sbjct: 485 KKLLDILKVDPSKR 498


>gi|320167707|gb|EFW44606.1| methionyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 583

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 177/528 (33%), Positives = 260/528 (49%), Gaps = 82/528 (15%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G   +F+TGTDEHG KI +AA   G+T     D+ S  FR++ D+ DI Y DF+RTTE+R
Sbjct: 3   GHQTVFSTGTDEHGMKIQQAAAAEGLTPLELCDRTSTRFRELFDLCDIGYTDFVRTTEER 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN 155
           H    R +W K++ +  IY G Y+GWYS+ DE +  + +   G      A  +      +
Sbjct: 63  HKAVARAVWTKLASEQLIYLGNYAGWYSVPDETFVPEAQTVAGVRKRDGAPCKLSLESGH 122

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLS 210
            ++W+E+  Y F+L  +++KLL + +S P  + P  R    +  V      S   DLS+S
Sbjct: 123 ELEWVEQPNYKFKLPLFKEKLLQWLDSQPATVAPQNRLAWTVQEVGQMKATSDADDLSVS 182

Query: 211 RKT--FDWGIKIPDDPQYIMYVWIDALTNYLT--------------TTGYLDNP--DGSK 252
           R T    WGI  P+DP ++MYVW+DALTNYLT              T    + P  DG  
Sbjct: 183 RLTQYLQWGIPTPNDPSHVMYVWLDALTNYLTVSQVPVHKLSEVKKTGAKPEFPALDGQV 242

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
              WPAD H+IGKDIL+FHAIYWPAFLL A L  PK+V +HG     G+K+SKS GN +D
Sbjct: 243 FSAWPADYHIIGKDILKFHAIYWPAFLLGAGLAPPKRVIAHGHWTVNGQKMSKSKGNGVD 302

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-- 370
           P + +   GVDA+RYFL R+     D  Y    +    N +LA   GNL+SR  +  L  
Sbjct: 303 PFDRVAVHGVDAVRYFLFRDSQLDSDCDYSDTRVTDLFNGELAAAFGNLLSRVFARALLQ 362

Query: 371 ----------------KDYDGM-----IPTP---GAFTESDESILSVCSRVLQEIRENMQ 406
                           +  D +     +P+     A+T SD   + V   + QE+ + + 
Sbjct: 363 PANQPSATLSSSPSSAQTADDLAAWAFVPSKLDGTAWTRSDA--IQVLPPIAQELHDKLN 420

Query: 407 N--QLIH---------RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----------- 444
               L+H         R +  V+  +   +R F   +PW L KT  + A           
Sbjct: 421 QLPSLVHEAYTDAQFARGITAVLFSIQCCNRAFTIVEPWTLAKTIREGALKNEPVNETAL 480

Query: 445 ---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                +LY+T+E +R  ++ L   +P+      + L +  + R  Q +
Sbjct: 481 TQLRAMLYLTLETLRIASLCLLPVLPRSMTAALNHLSIPADQRLAQHI 528


>gi|269796329|ref|YP_003315784.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098514|gb|ACZ22950.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 536

 Score =  280 bits (715), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 172/522 (32%), Positives = 254/522 (48%), Gaps = 60/522 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + LYI+T+I Y N +PH+GHA E++  DVLAR  RL G  V   +GTD+H  K   AA  
Sbjct: 2   DDLYITTSIPYVNGRPHLGHALELVHVDVLARHRRLRGAQVRVQSGTDDHALKNVSAASL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGC 123
           AGV     V  N   F ++ D L +  D+F+RT ++ RH      LW+     GD+Y+  
Sbjct: 62  AGVPVADLVAANGDRFVELVDALGVRTDEFVRTSSDPRHAPGVVALWEACRAAGDLYQKD 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+G Y    E +Y  DE+  G  G++      PVQ + E  +FFRLS Y+D++ +   S 
Sbjct: 122 YTGLYCPGCEQFYAADELVDGLCGEH----GTPVQEVTETNWFFRLSRYRDQVAALVASG 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              + P +RRNEV+ F+   + D+S+SR   +   WG+ +P DP  ++YVW DAL NYLT
Sbjct: 178 EVAVEPRQRRNEVLGFLAGEVHDISVSRPADRAGGWGVPVPGDPGQVVYVWFDALVNYLT 237

Query: 241 TTGY-------------LDNPDGSK--------------------------AKFWPAD-- 259
             GY              D   G +                          A++W     
Sbjct: 238 GLGYGSETGRGAAVGREADAVRGGRESVGAAGEAVEVSVAVDVGVGVEEPFARWWGGGAE 297

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             HV+GK I RFHA+YW AFLLSA LPLP +V  H ++   G KI+KS     DP  V+ 
Sbjct: 298 RTHVLGKGIARFHAVYWVAFLLSAGLPLPTRVLVHDYLTVDGAKIAKSGSQAADPATVVA 357

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G DALR++L R+ A      +  + L    + DLANG+GNLVSR++++  +D     P
Sbjct: 358 TYGPDALRWWLARDPAPVGTTDFTVERLVGCYDRDLANGLGNLVSRTLTLARRDRSWSAP 417

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 E    + +    +   +   +    +  A   +  LV   +R+ + + PW L +
Sbjct: 418 P---TAEVGVEVRAAARALPDAVDAALARYDLRSACEAITGLVEHGNRFIEGEAPWRLAR 474

Query: 439 T-------NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                      R   V+   VE+ R     L+ FVP+ A ++
Sbjct: 475 AADAGDLEAAARFEGVVDALVELCRVATHELEPFVPEGAARL 516


>gi|149238235|ref|XP_001524994.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
 gi|146451591|gb|EDK45847.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
          Length = 608

 Score =  280 bits (715), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 187/565 (33%), Positives = 283/565 (50%), Gaps = 83/565 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-TGTDEHGQKIAKAAQNA 65
           LY++T I Y NA PHIGH Y M+IAD   ++ +LD     +  TGTDEHG KI  AA   
Sbjct: 21  LYVTTPIFYVNAAPHIGHLYSMLIADTRCKWEKLDPKKSSYMLTGTDEHGLKIQVAAAKQ 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K  VD+ S NF+D+    D++YD FIRTT+  H    +  WK + +KG IYKG +S
Sbjct: 81  GIDPKQLVDKVSGNFKDLCANSDVTYDRFIRTTDDDHVKVTKYFWKLMEEKGYIYKGSHS 140

Query: 126 GWYSLRDEAYYND---DEVYK-GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           GWY + DE +Y +   +EV + G   +      N V + EE  YFF+LSA+QD+L+ + +
Sbjct: 141 GWYCVSDETFYPETAIEEVERDGKIIKISTETKNEVVFEEETNYFFKLSAFQDQLIQFLK 200

Query: 182 SHPEFILPIERRNEVIS-FVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
            +P +I P  R + +++  + S L+DLS+SR      W I +P+D    +YVW DAL NY
Sbjct: 201 ENPNWIKPKHRYDFIMNELLNSPLEDLSISRPASRLSWSIAVPNDESQKIYVWFDALLNY 260

Query: 239 LTTTGYLD--NPDG----------------------------SKAKF-------WPADLH 261
           LT TG+      DG                            S   F       WPA  H
Sbjct: 261 LTATGFPKQFQSDGVTKVGTSNNNGGSNNNENNENNENNENISSQSFQTPPLNIWPA-TH 319

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +IGKDI+RFH IYWP FL++A + LPK+V  H   L  G K+SKSLGNVI P ++++  G
Sbjct: 320 IIGKDIIRFHCIYWPIFLIAAGIELPKEVIVHSHWLSDGVKMSKSLGNVIKPKDILDYYG 379

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-- 379
           +D +R+F +       D  Y  D L  +    L N   NL++R +S    D  G +    
Sbjct: 380 IDPVRFFFMENSNISDDCKYS-DELIHQSRGLLINKYCNLINR-ISSTRFDIRGGVEMYH 437

Query: 380 PGAFTESDE---------------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            G F + +E               S++S  +++   + + ++    +RA+    S +++ 
Sbjct: 438 QGKFEDINEFVKQEAGNEVAAEIQSLISNLNQLYSVMNDEIKEYRYNRAIQAWWSAINQA 497

Query: 425 DRYFDAQKPW-------------ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           ++ F    PW             E +++     +   ++  E +R  +IL+Q  + +L+ 
Sbjct: 498 NQIFQLSHPWSYVSAIADEQTPQETRESYQKLINYYTFICSECVRIASILIQPVMHELSG 557

Query: 472 KIFDILFVADENR-----CFQSLDQ 491
            I D + V    R     CF + DQ
Sbjct: 558 IILDRMNVDKTKRTSEFACFGADDQ 582


>gi|71893760|ref|YP_279206.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71851887|gb|AAZ44495.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 513

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/515 (31%), Positives = 280/515 (54%), Gaps = 16/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ A  
Sbjct: 3   KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ G Y
Sbjct: 63  ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +   +P
Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182

Query: 185 EFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTT- 241
           +FI   +  NE+  +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL+  
Sbjct: 183 KFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242

Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
              +D  +  K+ FW      + V+GK+I RFH IYWP FL S N PLP  + +HG+++ 
Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFPLPSIILTHGWLIT 302

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   N  
Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHRALA 415
           GNL+SR++++I+K +D   P      + D + +S   ++L  + E   N  QL I +A  
Sbjct: 363 GNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFK 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            VI L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I +
Sbjct: 421 TVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILE 478

Query: 476 ILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
            L + ++N      LD+  K  F   K   P FPR
Sbjct: 479 FLGINEKNFLLITKLDKFDKINF--KKLEKPFFPR 511


>gi|23012796|ref|ZP_00052797.1| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 297

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 132/294 (44%), Positives = 192/294 (65%), Gaps = 4/294 (1%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +P D  +IMYVW+DALTNY+T  GY D   G  A++WP  +H++GKDI+RFHA+YWPAFL
Sbjct: 1   MPGDDAHIMYVWLDALTNYITAVGYPDT-TGDFARYWPNVIHMVGKDIVRFHAVYWPAFL 59

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++A+LP P++VF+HG+  ++G+KISKS+GNVIDP+ +IE  G+D +RYFL+RE+  G DG
Sbjct: 60  MAADLPAPRRVFAHGWWTNEGQKISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDG 119

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +    +  R+N++LAN  GNLV RS+SMI K+  G+ P     T+ D+ +L     +L 
Sbjct: 120 DFSHRAMMGRMNSELANDYGNLVQRSLSMIGKNCSGVTPAHSPDTDDDKEMLGAAYAMLA 179

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           ++R++M  Q+ H A+  +  ++   + Y D Q PW LKKT+P R  TVL+V  E IR L 
Sbjct: 180 KVRDSMDRQMYHEAIEAIWVVIRAANGYVDKQAPWALKKTDPARMGTVLWVLAETIRCLG 239

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
           +L Q F+P  + +I D L V +  R F        LK G  L  T   +FPR++
Sbjct: 240 LLTQPFMPAASARILDQLMVPEAERSFAFFGPAHALKAGITL-PTPQGVFPRYV 292


>gi|54020190|ref|YP_115920.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987363|gb|AAV27564.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 520

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 163/518 (31%), Positives = 280/518 (54%), Gaps = 16/518 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ 
Sbjct: 7   KMTKKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQL 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ 
Sbjct: 67  AAKANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFN 126

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +  
Sbjct: 127 GEYQGLYSISDEEFLSQSQAVYQNRNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLL 186

Query: 182 SHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYL 239
            +P+FI   +  NE+  +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL
Sbjct: 187 ENPKFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYL 246

Query: 240 TT-TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +     +D  +  K+ FW      + V+GK+I RFH IYWP FL S N  LP  + +HG+
Sbjct: 247 SVFKDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGW 306

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++    K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   
Sbjct: 307 LITPEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFV 366

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHR 412
           N  GNL+SR++++I+K +D   P      + D + +S   ++L  + E   N  QL I +
Sbjct: 367 NTFGNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEK 424

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A   VI L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+
Sbjct: 425 AFKTVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNE 482

Query: 473 IFDILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
           I + L + ++N      LD+  K  F   K   P FPR
Sbjct: 483 ILEFLGINEKNFLLITKLDKFDKINF--KKLEKPFFPR 518


>gi|312601349|gb|ADQ90604.1| Methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 513

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/517 (32%), Positives = 284/517 (54%), Gaps = 20/517 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ A  
Sbjct: 3   KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ G Y
Sbjct: 63  ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122

Query: 125 SGWYSLRDEAYYNDDE-VYKGADGQYYN-AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            G YS+ DE + +  + VY+  +G Y++      ++ + E+ YFF +  +Q  L  +   
Sbjct: 123 QGLYSISDEEFLSQSQAVYQ--NGNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLE 180

Query: 183 HPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLT 240
           +P+FI   +  NE+  +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL+
Sbjct: 181 NPKFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLS 240

Query: 241 T-TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
                +D  +  K+ FW      + V+GK+I RFH IYWP FL S N  LP  + +HG++
Sbjct: 241 VFKDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGWL 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           +    K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   N
Sbjct: 301 ITPEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHRA 413
             GNL+SR++++I+K +D   P      + D + +S   ++L  + E   N  QL I +A
Sbjct: 361 TFGNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKA 418

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              VI L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I
Sbjct: 419 FKTVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEI 476

Query: 474 FDILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
            + L +  +N      LD+  K  F   K   P FPR
Sbjct: 477 LEFLGIRQKNFLLITKLDKFDKINF--KKLEKPFFPR 511


>gi|72080730|ref|YP_287788.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71913854|gb|AAZ53765.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 513

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 278/515 (53%), Gaps = 16/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ A  
Sbjct: 3   KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ G Y
Sbjct: 63  ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +   +P
Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182

Query: 185 EFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTT- 241
           +FI   +  NE+  +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL+  
Sbjct: 183 KFIFDSKIANELRQNFLQRGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242

Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
              +D  +  K+ FW      + V+GK+I RFH IYWP FL S N  LP  + +HG+++ 
Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGWLIT 302

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   N  
Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL-IHRALA 415
           GNL+SR++++I+K +D   P      + D + +S   ++L  + E   N  QL I +A  
Sbjct: 363 GNLISRTIALIVKKFDQ--PLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFK 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            VI L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I +
Sbjct: 421 TVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILE 478

Query: 476 ILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
            L +  +N      LD+  K  F   K   P FPR
Sbjct: 479 FLGIRQKNFLLITKLDKFDKINF--KKLEKPFFPR 511


>gi|290992262|ref|XP_002678753.1| methionyl-tRNA synthetase [Naegleria gruberi]
 gi|284092367|gb|EFC46009.1| methionyl-tRNA synthetase [Naegleria gruberi]
          Length = 636

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/511 (32%), Positives = 266/511 (52%), Gaps = 53/511 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAA---- 62
           I+T I Y N  PHIGH +  I++D +  +H+   +  D++F+TGTDEHG K+ + A    
Sbjct: 71  ITTPIYYVNGPPHIGHLFTTILSDSIYLYHKQLKNRHDMIFSTGTDEHGSKVQRTAIKNL 130

Query: 63  --QNA------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKI 113
             QN         +   F ++ S  F+ M    +I Y  ++RT+  R H +T   +WK++
Sbjct: 131 PNQNTLDDETINKSCVEFCEKISETFKTMMKDFNIQYTHYLRTSATREHRETVERVWKEL 190

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------YYNAQHNPVQWMEEEGYF 166
             +GDIY G Y GWY   DEA+  D E  K  + +          A  N  +++ E+ Y 
Sbjct: 191 EKRGDIYLGEYQGWYCTTDEAFTTDIEQVKITNEKGEEELVTLSKASGNRCEFVTEKNYK 250

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK------DLSLSRKT--FDWGI 218
           FRLS Y D++  + E +P  + P ER NE++  +K   +      DLS+SR      WGI
Sbjct: 251 FRLSKYMDRIQQWLEENPNTVKPKERYNELMELIKKEKERSPESLDLSISRTRDRVQWGI 310

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            +PDD ++ +YVW+DALTNYLT    L N    ++  WP  + +IGKDIL+FH IYWPAF
Sbjct: 311 PVPDDSEHTIYVWLDALTNYLTAGSTLAN----ESLNWPPTVQIIGKDILKFHGIYWPAF 366

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACG 336
           L++    LP+ +  H + L    K+SKSLGNV+ P +++ + GV  D LRY+L+ E    
Sbjct: 367 LMALGKELPETILVHSYWLVNDVKMSKSLGNVVSPYDLLNQTGVEHDLLRYYLLSEAVLS 426

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-------TPGAFTESDES 389
            D  +       +VN +LA+  GNL++R+ +      +G I         P A    +++
Sbjct: 427 NDSSFSMVRFPVKVN-ELADIFGNLLTRAFNKKFHAEEGEIQYRNLQFDCPNAEQNPNQT 485

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-----EVDRYFDAQKPWELKK---TNP 441
              +   +L +++E ++N    R   +  +L +     + ++ FD  KPW L K    N 
Sbjct: 486 AQELI-ELLNDLQEQVRNAYEERCEVRFANLAATKILKKCNQLFDEVKPWILVKDAVANA 544

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +   ++++  E +R  +I L   +P   N+
Sbjct: 545 QQIEELMFLVAETLRNCSIALYPVLPHKMNQ 575


>gi|166157037|emb|CAO79494.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [uncultured candidate division WWE3 bacterium
           EJ0ADIGA11YD11]
          Length = 471

 Score =  273 bits (697), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 168/481 (34%), Positives = 268/481 (55%), Gaps = 33/481 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKA 61
           ++K+ I+TAI Y N   HIGHAY+ I+AD +ARF R+     +V F TGTDEHGQK+   
Sbjct: 2   KKKILITTAIDYVNDVIHIGHAYQKILADCVARFERIRRGSENVFFVTGTDEHGQKVYNV 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV  K FVD+ S+  ++  D + ISYD FIRTT+  H  T    ++K+ + G IYK
Sbjct: 62  AKERGVDVKEFVDEISKKDQEQQDSIQISYDRFIRTTDGDHKKTAEDFFRKVYNAGYIYK 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G Y    E+Y  + ++  G    +   +   +Q +EEE YFF+ S+++D L + YE
Sbjct: 122 DNYKGLYCEGCESYKTEKDLINGRCALHPGLE---IQVVEEENYFFKFSSFKDFLRTLYE 178

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
            +P+F+LP  R  E+ +F+ + ++D+ ++R+     WGI+ P D  ++++VW DAL NYL
Sbjct: 179 KNPDFVLPNSRYREMYAFIDT-IEDIPITRRKEKLPWGIECPIDKNHVIWVWFDALINYL 237

Query: 240 TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           T         G +   W  D   +H +GKD  R HA+ WP  L +A   +P  V+ + F+
Sbjct: 238 TF--------GLQVNSWDEDTEIVHFLGKDNARMHALLWPCMLKAAGYSMPTHVYVNAFL 289

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+KISKSLGN++ P +++E  G D +RY+ +R     +D  + +   ++  NADLAN
Sbjct: 290 SMNGKKISKSLGNIVAPKDLVERYGADPVRYYFLRYGPIIEDSDFSESHFQEVYNADLAN 349

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G+GN V+R   +  K    +     A  E  ++ L + S+   E R ++       AL +
Sbjct: 350 GLGNTVARLAKLAEKSDFSLT----AEKEKKDTFLEL-SQYFDEFRVDL-------ALQK 397

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + S ++ +D++ +   PW +K  N D+   VL   +  +  +A L + FVP  + KI  I
Sbjct: 398 IWSKLANLDKHINENAPWSIK--NNDKLKEVLEYEIGELCNIAELCKPFVPGTSEKILKI 455

Query: 477 L 477
            
Sbjct: 456 F 456


>gi|13507762|ref|NP_109711.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501031|sp|P75091|SYM_MYCPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1673790|gb|AAB95779.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 512

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/518 (32%), Positives = 262/518 (50%), Gaps = 20/518 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y + +PHIGHA+  I+ADV+ R+ + +G +  F TGTDEHG KI   A++
Sbjct: 2   KRCYITTPIYYASGKPHIGHAFTTILADVIKRYKQQNGYEAYFLTGTDEHGNKIESKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + FVDQN   F+ M   LDI++D FIRTT+  H    +  ++ + DKG IY+  +
Sbjct: 62  LGLDPQTFVDQNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQHAFQLLYDKGLIYQSNW 121

Query: 125 SGWYSLRDEAYY--NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            G Y +  E  Y   D +      G       + +  ++E   F      +D +     +
Sbjct: 122 EGAYCVECEQNYFTYDKQTMLCEIG-------HQLTLVQEPSLFIAFKDSKDWIGEMIAT 174

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +   I P  R  E+  +F+  GL DL+L+R+   WGI +P D +  +YVW DAL NY+T 
Sbjct: 175 NKLNITPESRAAELKNNFLDGGLNDLALTRQNVTWGIPVPFDNKQTIYVWFDALFNYITN 234

Query: 242 TGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            G+  N D    K+W  +      +H+I ++I RFH IYWP FL      LP +  SHG+
Sbjct: 235 LGFAHN-DPKFNKWWNNNDEEHEVIHLISREITRFHCIYWPIFLHQLGFKLPTQFLSHGW 293

Query: 296 ILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I+   G K+SKSLGNVI P E++ + GVD  RY L++E+   KD        K   NADL
Sbjct: 294 IVDGNGHKMSKSLGNVISPEELLAQFGVDGTRYCLLKEMRLDKDNRCSMAIFKDIYNADL 353

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN  GN  SR+  MI K   G +          + ++   ++ + +      N   ++ +
Sbjct: 354 ANSFGNHASRTFGMIKKYLGGQLDFIEVQDPQVKQLMDQANQAMVQFDTAWNNFQFYKGI 413

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++ LV +  +  D  KPWEL K+T+      +L+  V   +   +LL   +   + +I
Sbjct: 414 NGLLQLVFQASKLIDQLKPWELVKQTDYTLLKQLLFACVRCTQVCFVLLAPILVHTSTQI 473

Query: 474 FDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           FD+   + + R    L D +      L     P+F R 
Sbjct: 474 FDLFNFSAQARSKTHLADPQQLQKISLAPVIQPLFKRL 511


>gi|301633711|gb|ADK87265.1| methionine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 512

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/491 (33%), Positives = 253/491 (51%), Gaps = 19/491 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y + +PHIGHA+  I+ADV+ R+ + +G +  F TGTDEHG KI   A++
Sbjct: 2   KRCYITTPIYYASGKPHIGHAFTTILADVIKRYKQQNGYEAYFLTGTDEHGNKIESKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + FVDQN   F+ M   LDI++D FIRTT+  H    +  ++ + DKG IY+  +
Sbjct: 62  LGLDPQTFVDQNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQQAFQLLYDKGLIYQSNW 121

Query: 125 SGWYSLRDEAYY--NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            G Y +  E  Y   D +      G       + +  ++E   F      +D +     +
Sbjct: 122 EGAYCVECEQNYFTYDKQTMLCEIG-------HQLTLVQEPSLFIAFKDSKDWIGEMIAT 174

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +   I P  R  E+  +F+  GL DL+L+R+   WGI +P D +  +YVW DAL NY+T 
Sbjct: 175 NKLNITPESRAAELKNNFLDGGLNDLALTRQNVTWGIPVPFDNKQTIYVWFDALFNYITN 234

Query: 242 TGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            G+  N D    K+W  +      +H+I ++I RFH IYWP FL      LP +  SHG+
Sbjct: 235 LGFAHN-DPKFNKWWNNNDEEHEVIHLISREITRFHCIYWPIFLHQLGFKLPTQFLSHGW 293

Query: 296 ILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I+   G K+SKSLGNVI P E++ + GVD  RY L++E+   KD        K   NADL
Sbjct: 294 IVDGNGHKMSKSLGNVISPEELLAQFGVDGTRYCLLKEMRLDKDNRCSMAIFKDIYNADL 353

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN  GN  SR+  MI K   G +          + ++    + + +      N   ++ +
Sbjct: 354 ANSFGNHASRTFGMIKKYLGGQLDFIEVQDPQVKQLMDQADQAMVQFDTAWNNFQFYKGI 413

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++ LV +  +  D  KPWEL K+T+      +L+  V   +   +LL   +   + +I
Sbjct: 414 NGLLQLVFQASKLIDQLKPWELVKQTDYTLLKQLLFACVRCTQVCFVLLAPILVHTSTQI 473

Query: 474 FDILFVADENR 484
           FD+   + + R
Sbjct: 474 FDLFNFSAQAR 484


>gi|258566610|ref|XP_002584049.1| methionine-tRNA ligase [Uncinocarpus reesii 1704]
 gi|237905495|gb|EEP79896.1| methionine-tRNA ligase [Uncinocarpus reesii 1704]
          Length = 445

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 147/395 (37%), Positives = 212/395 (53%), Gaps = 25/395 (6%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRL 169
           +G IY   + GWYS+ DE +Y    V+   D                V+W  E  Y FRL
Sbjct: 22  RGHIYTAKHEGWYSVSDETFYPSSAVHATLDPATGRKIMSAIETGKEVEWSSETNYHFRL 81

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYI 227
           SA++D+LL +Y  +P+FI P    ++V+  V SGL DLS+SR  +   WGI++P D    
Sbjct: 82  SAFKDQLLDFYNENPKFIRPQRYMDDVVETVSSGLSDLSISRPVQRLTWGIRVPGDETQT 141

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           +YVW+DAL NYLT  GY   P       WPADLHV+GKDILRFH +YWPAFL++ +LPLP
Sbjct: 142 IYVWLDALVNYLTYAGYPFTPGKENKSIWPADLHVVGKDILRFHGVYWPAFLMALDLPLP 201

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ SH       EK+SKS GNV++PI  I   GVD LR++L R+     D  Y+   + 
Sbjct: 202 RQILSHAHWTIGREKMSKSTGNVVNPIYAITRFGVDPLRFYLARDGGLSDDADYENAFVT 261

Query: 348 KRVNADLANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +R    L   +GNL SR V          I + + G +  P   +E+D     +   V  
Sbjct: 262 ERYKKTLQWALGNLASRLVRSKKWSVRQSIERSFGGELSKP---SEADRKHQELLEEVRD 318

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVI 455
             +  M +    +A   V+ ++ E ++YF    PW L    +  +P+R   V+Y T E +
Sbjct: 319 VTKTWMDDVNPRKAAESVVGIIYETNKYFQDSSPWSLATQSEMGSPNRLDRVVYNTAESL 378

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
           R   ILLQ F+P+ A ++ D+L VA +   R F +
Sbjct: 379 RIAGILLQPFMPEKAARLLDMLGVAGDPAKRSFNA 413


>gi|316976357|gb|EFV59666.1| tRNA synthetase class I family protein [Trichinella spiralis]
          Length = 988

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/498 (33%), Positives = 259/498 (52%), Gaps = 55/498 (11%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           +++  I Y N+ PH+GH Y  +IAD   R+ +L       LF++GTDEHG K+  AA  A
Sbjct: 11  FVTAPIYYANSGPHLGHLYSSLIADAAHRWFKLKNPHQLTLFSSGTDEHGSKVENAALKA 70

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
                       +N  ++     I   DFIRT E RHH + +  W+ +     IYKG YS
Sbjct: 71  -----------EKNVDELFSKFGIETTDFIRTVEARHHQSVQQFWEVLRKNNFIYKGKYS 119

Query: 126 GWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY   DE +YN+ ++   +    +   A H  V+W+ EE Y F+LS +  ++  + ++ 
Sbjct: 120 GWYCSADECFYNESDLCDDETKSCKTTTAGHT-VEWVVEENYLFKLSEFLPEIQHWLQTS 178

Query: 184 P---EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
               + + P +    VI+ +K  L D+S+SR  +   WGI +PDD    +YVW DAL NY
Sbjct: 179 GMSDDVVQPAQYLPFVINQLKQ-LSDVSISRDRQRLSWGIPVPDDCSQTIYVWFDALVNY 237

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY     G   + WP D H+IGKDIL+FHAI WPA LL+AN PLPK++F HG  L 
Sbjct: 238 LTVAGY----PGQLCR-WPPDCHIIGKDILKFHAILWPAMLLAANFPLPKQIFCHGHWLS 292

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGNV+DP    +++  + LR+  +          Y        +N +LAN I
Sbjct: 293 DGVKMSKSLGNVVDPTLEAQKLTCEGLRFQKLLPD-------YSTPLAISVLNDELANSI 345

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS-RVLQEIRENMQN---------- 407
           GNL++R+ S  +   D        FT+ DES+++  S R   ++  ++ N          
Sbjct: 346 GNLINRTTSSRVLRGD-------CFTDFDESVINGPSIRQGPDLMTDLDNLPSIVGQQYD 398

Query: 408 -QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQA 464
                  +  ++++V + + +     PW L K     +   TVL++  + +R   ILL+ 
Sbjct: 399 KMQFSNGINSIVTVVKKANAFVQHFSPWHLAKDKNANSLLDTVLHLAHQTLRTCGILLKP 458

Query: 465 FVPKLANKIFDILFVADE 482
            VP +A+++ + L V+ +
Sbjct: 459 VVPNIADEMLNRLSVSSD 476


>gi|313217418|emb|CBY38518.1| unnamed protein product [Oikopleura dioica]
          Length = 568

 Score =  267 bits (682), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 174/502 (34%), Positives = 270/502 (53%), Gaps = 29/502 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++  I Y  + PHIGH +  +I D   R+++++ +   F+ GTDEHGQKI ++A   G 
Sbjct: 43  FVTCPIYYATSSPHIGHIHSSVIGDFYHRWNKINDVASKFSLGTDEHGQKIIRSAAQQGY 102

Query: 68  T-TKVFVDQNSRNFRDMADVLDIS---YDD--FIRTTEKRHHDTCRILWKKISDKGDIYK 121
              ++ V+  S  +R       IS    DD  F+RTT   HH   + LW ++  KG I  
Sbjct: 103 DHPEILVNNISDLYRRTFKKFSISVASLDDAIFMRTTTSEHHQAAQKLWTRLRSKGFIKM 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y GWYS  DEA+    E+ +  DG++++A + + ++W+ EE Y F    + +++ S+ 
Sbjct: 163 QNYEGWYSTPDEAFVGAKEIIE-KDGKHFSAVNGHKLEWVSEENYIFEFEPFLNEIQSWI 221

Query: 181 ESHPEFILPIERR---NEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDAL 235
               + + P   +   +E+    K+G   LS+SR      WG+ +P+D  + MYVW +AL
Sbjct: 222 V---KAVAPDAAKILIDELKDRRKTGNMSLSISRPRNRVPWGVAVPNDANHTMYVWFEAL 278

Query: 236 TNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NYLT  GY     G+ A +FWP  L VIG DI RFH I+WPA LL+A LPLPKKVF HG
Sbjct: 279 INYLTAAGY--GKHGNNALEFWPPQLQVIGIDIARFHCIFWPAMLLAAELPLPKKVFVHG 336

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                G K+SKSL N + P E++E VG   DA+R+F ++        F D + L+ + +A
Sbjct: 337 HWTRDGMKMSKSLDNFVTPKELLELVGNQSDAVRWFCLKHATLKNVDFQD-ELLRIQSDA 395

Query: 353 DLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ- 408
           DLAN I NL+SR+ S  L     Y  + P         E  L    + L E+  +  N  
Sbjct: 396 DLANKIANLLSRTTSKNLNPSGAYPTLFPDSLLNAPDGEKYLIETVQELPELYASFVNAG 455

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +  A+  VI  + E  ++   +K ++L    K+   +  + L+   E++R  AILLQ  
Sbjct: 456 QLPNAMNCVIRAIEEGLQFMTNEKIFKLDRDIKSERMKKDSALHACYELLRVSAILLQPA 515

Query: 466 VPKLANKIFDILFVADENRCFQ 487
           +P++++KI + L +  ENR F+
Sbjct: 516 IPQISSKILNRLGIPLENRYFE 537


>gi|312377089|gb|EFR24006.1| hypothetical protein AND_11736 [Anopheles darlingi]
          Length = 495

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 193/339 (56%), Gaps = 10/339 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKAAQ 63
           +++T I Y NA PHIGH Y  +IAD + RF+R+           +TGTDEHG KI +AA 
Sbjct: 18  FVTTPIFYVNAAPHIGHLYSAVIADAVHRFNRIATPEKSRSCFLSTGTDEHGMKIQQAAV 77

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               +T+ + +  S  +R++     + Y  FIRTTE  H    +  W+ +   G IY   
Sbjct: 78  LHSTSTEDYCNSISARYRELFRQFRVDYSRFIRTTETDHRRAVQTFWRTLEASGSIYSAN 137

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWY + DE +  + ++ +   G+  + +  +PV+W EE+ Y FRLS YQD++  + +S
Sbjct: 138 YAGWYCVPDETFLTESQLKENERGEKCSLESGHPVEWTEEQNYMFRLSQYQDEVRYWVKS 197

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
             + + P + R  ++ ++   L D+S+SR      WGI +P DP   +YVW+DAL NYLT
Sbjct: 198 SEDRVQPEKFRRILLDYLDEPLPDISISRPIGRVSWGIPVPTDPSQSVYVWLDALVNYLT 257

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY   P    A  WP  + V+GKDIL+FH IYWPAFLL+A L  P+++  H       
Sbjct: 258 VVGY---PKEGFAAQWPPSVQVLGKDILKFHGIYWPAFLLAAKLEPPRQLLVHSHWTVDN 314

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +K+SKS  NV+DP E  E    + LRYFL+RE     DG
Sbjct: 315 QKMSKSKFNVVDPAERAELYTHEGLRYFLLREGVAHSDG 353



 Score = 44.7 bits (104), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 433 PWELKKTNP--DRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           PW+LKK+    DRA  + +L +T+EV+RQ AI++Q  +P L  ++ D L +    R +++
Sbjct: 388 PWKLKKSESPDDRAMLNAILTITMEVLRQTAIVMQPIIPVLTERLLDKLNIPTSARTWEN 447


>gi|218678320|ref|ZP_03526217.1| methionyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 229

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 113/201 (56%), Positives = 160/201 (79%)

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KGEK
Sbjct: 1   GYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKGEK 60

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGNL 
Sbjct: 61  MSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGIRINSDLANGIGNLA 120

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS+SMI+K+ DG IP  G  ++ D+++L+    +     E+M  Q IHRALA +I++VS
Sbjct: 121 SRSLSMIVKNCDGKIPECGPLSDEDKAMLAQADALHASTCEDMGKQQIHRALASIIAVVS 180

Query: 423 EVDRYFDAQKPWELKKTNPDR 443
           E DRYF  Q PW LKKT+P+R
Sbjct: 181 ETDRYFAGQAPWALKKTDPER 201


>gi|118399643|ref|XP_001032146.1| methionyl-tRNA synthetase [Tetrahymena thermophila]
 gi|89286484|gb|EAR84483.1| methionyl-tRNA synthetase [Tetrahymena thermophila SB210]
          Length = 540

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 258/499 (51%), Gaps = 47/499 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +++ I+T I Y N+QPHIGH Y +I++D   ++  +D  +  F TGTDEHGQKI  +A+
Sbjct: 16  NKQISITTPIFYVNSQPHIGHLYTLILSDAYHKWKLIDNYESYFQTGTDEHGQKIQNSAK 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A    + FVDQ S+ F D+A    ISYD F RT++++                      
Sbjct: 76  QAQKDPQQFVDQVSQKFVDLASQYSISYDKFNRTSDEK---------------------- 113

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY   DE +  + ++ K + G++      PV W+ EE + F L   ++ ++ Y E+ 
Sbjct: 114 YEGWYHTSDETFVGEKDLVKDSSGKFVTQSGQPVDWVSEETHIFVLDKIREAVIKYLENE 173

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              + P    N +I  ++  LKD+S+SR      WGI +P + +Y +YVW+DALTNYLT 
Sbjct: 174 KP-VYPEHYNNSMIKQLEE-LKDISISRPKSRLTWGITVPSNEKYTIYVWLDALTNYLTG 231

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +N + +K        H++GKDIL+FH+I+WPAFLL+A    P+K+  H   +   +
Sbjct: 232 LGYPNN-NINKIHLSNNFFHIMGKDILKFHSIFWPAFLLAAGYSTPQKILIHHHWIKDNQ 290

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP+E+  + G+D++R + + E     D  +D+  L K  N     G  NL
Sbjct: 291 KMSKSLGNVVDPVELGNKYGIDSVRLYFLSEGPQDFDANFDEVDLTKTYNL-FIEGFSNL 349

Query: 362 VSRS-----------VSMILKDYDGMIPTPGAFT-------ESDESILSVCSRVLQEIRE 403
            S             V+++ + ++  I   G  T       E D   +S  + +  +I+E
Sbjct: 350 NSIKIINAKHNIQFLVNLMSRVFNKKIIKDGKITEISWVLNEQDLEYISKFTTISNKIQE 409

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++      R    +  L    ++      PW+   +  ++  +  Y+ +E +R L+I L 
Sbjct: 410 HLDKCDFRRGYFAMSELWGMTNKLMTDHAPWQKDISEVEKQKSS-YLILESVRVLSIFLY 468

Query: 464 AFVPKLANKIFDILFVADE 482
            F+P+    ++ ++ + ++
Sbjct: 469 PFIPQYIQNVYQLMNIKND 487


>gi|256071351|ref|XP_002572004.1| methionine-tRNA synthetase [Schistosoma mansoni]
 gi|238657154|emb|CAZ28234.1| methionine-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 589

 Score =  256 bits (655), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/542 (30%), Positives = 253/542 (46%), Gaps = 104/542 (19%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL--------------- 46
           +  +  +I+  I Y NA+PH+GHAY   +AD  AR+  L    +L               
Sbjct: 52  RSEKPFFITCPIFYVNAKPHLGHAYTTCLADAWARYSCLRNQPILKPFQQDYIASTYSPV 111

Query: 47  ----------FTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                      + GTDEHG K                         +     + Y+DFIR
Sbjct: 112 FDYCNLNKTFLSCGTDEHGSKT------------------------LCHATHVKYNDFIR 147

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-- 154
           TTE RH       W +++  G++Y+  YSGWY + DEA+Y   E+ + +      ++   
Sbjct: 148 TTETRHVKAVHEFWNRLNASGNVYRSKYSGWYCVSDEAFYTPWEIDETSLSGVPVSKETG 207

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL----KDLSLS 210
           NPV+W+EEE Y F+LS++++ L  + +S    + P      V   +   +    +D+S+S
Sbjct: 208 NPVEWIEEENYMFKLSSFKNDLHKWLDSG---VFPKSSNQSVWCNMAHNMVGNSQDISIS 264

Query: 211 R--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY--LDNPDGS-KAKFWPADLHVIGK 265
           R     DWGI +P D + I+YVW DAL NYLT TG+   +  DGS K   WP D+  +GK
Sbjct: 265 RPKSRSDWGIHVPGDNEQIVYVWFDALINYLTVTGFPWSNVNDGSFKQSLWPPDVQFLGK 324

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI----------- 314
           DI+RFHA+ WPA L++ NLPLP+ +  H  +L    K+SKS GN +DPI           
Sbjct: 325 DIIRFHAVLWPALLMAVNLPLPRLLICHHHVLVDNVKMSKSRGNQVDPIVEQSALLSDEL 384

Query: 315 --EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
              VI     D LRY L+R      DG Y ++  +K +N +L N IGNL+SR +S  L  
Sbjct: 385 NSNVITPAESDLLRYVLLRLPLLTYDGTYSREMARKMINTELVNWIGNLLSRIISESLNP 444

Query: 373 YDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQN------------QLIHRALA 415
              +I          F   D  +         E  +N+ N               H+A+ 
Sbjct: 445 EQSIIQINRQQVDDMFYNDDSDM---------EFFDNLDNISHHFDKLWWYEAQPHKAIE 495

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +V+ ++ + + +     PW  ++    R   +L V  E +R  A+LLQ  +P L+ ++  
Sbjct: 496 EVLGIIRQTNEFITRHSPWTEREL--LRRQFILSVVSESLRICALLLQPVIPNLSIRLLH 553

Query: 476 IL 477
            L
Sbjct: 554 RL 555


>gi|189218093|ref|YP_001938735.1| Methionyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189184951|gb|ACD82136.1| Methionyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 444

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 149/417 (35%), Positives = 228/417 (54%), Gaps = 15/417 (3%)

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  K F D  +  F  + + L I YD F RTT+  H    R   +K++DKG IY   + G
Sbjct: 1   MEVKKFCDIQAEKFLQLWEKLQIHYDAFARTTQPSHVQYVRHALQKLADKGLIYFKEHEG 60

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YSLR E +  + ++  G   + Y      V   +E  YFFRLSA+ + L SY   +  +
Sbjct: 61  YYSLRQEQFVTEKDLVDGKWPEIYGE----VIKTKEPNYFFRLSAFSEWLKSYVRDNENW 116

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            +P  +R E++  ++  L DL +SR      WGI +P D  Y+ YVW DAL NY++    
Sbjct: 117 FIPQSKRKELLGALERPLADLCISRPVSRLSWGIPLPFDENYVTYVWFDALLNYVSFA-- 174

Query: 245 LDNPDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
               +G    +WPA LHVIGKDI +  HAIYWP  L +  L  P+    HG+ ++KG K+
Sbjct: 175 --RKEGDNQGWWPAQLHVIGKDIFIPAHAIYWPIILKALELEQPRHFLIHGWWMNKGAKM 232

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+  +E  G DALRY+L+RE+A G+D  +  D +  R N+DL N +GNLV 
Sbjct: 233 SKSLGNFIDPLPYLEIFGADALRYYLLREMAFGQDADFADDKIWARYNSDLCNDLGNLVQ 292

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEIRENMQNQLIHRALAQVISLVS 422
           R   MI K   G+IP+    T  +E+   +  R + ++   + +   I +AL ++   + 
Sbjct: 293 RITVMIHKYRSGVIPSCSE-TMMEENEKELLDRDLFEKYCLSFEKYDIAQALQEIWQHIK 351

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +++RY +   PW L K +    R   +L  +   +++ A+L+   +P+ ANKI  +L
Sbjct: 352 KLNRYIENNAPWSLAKNSKQSQRLDCILLASSICLKRYALLIDPVMPQTANKILSLL 408


>gi|225680905|gb|EEH19189.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 487

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/383 (37%), Positives = 217/383 (56%), Gaps = 28/383 (7%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLL 177
           + GW+S+ + A+Y    V    D   G+   A       VQW  EE Y FRLSA+++ LL
Sbjct: 68  HEGWFSVSERAFYPPSAVQPILDPSTGRKIIASIETGKEVQWTSEENYHFRLSAFKEPLL 127

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +Y +HP FI P    +++++ + +GL+DLS+SR     +WGI +P D   ++YVW+DAL
Sbjct: 128 EHYRNHPNFITPKHYMDDMMNAISAGLQDLSISRPASRLNWGIPVPYDESQVIYVWLDAL 187

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY   PD      WPAD+ V+GKDILRFH IYWPAFL++  LPLP+++ +H  
Sbjct: 188 VNYITYAGYPFPPDAKS--IWPADVQVVGKDILRFHCIYWPAFLMALGLPLPRQIMAHAH 245

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                EK+SKS GNV++P   IE  GVD +R+FLV + A   D  Y+   + +R    L 
Sbjct: 246 WTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQVSDSGYENSYIVERYKKGLQ 305

Query: 356 NGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            G+GNL SR +        S ++   +G  P     TE  + + S+  +     R+ M+ 
Sbjct: 306 RGLGNLASRVLRGKKWIVRSSVVMAGEGRFPR----TEHQDFLESIPEKA----RDEMRQ 357

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
               +AL  ++ ++ + ++YF   KPW L  +N    ++V+Y T E +R   ILLQ F+P
Sbjct: 358 LDPRKALNSIMEIIIQTNKYFHQMKPWILAMSNVVMLNSVIYSTAESLRIAGILLQPFMP 417

Query: 468 KLANKIFDILFVAD--ENRCFQS 488
           + ++++ D+L VA   E R F +
Sbjct: 418 QKSSELLDMLGVARAAEKRNFDA 440


>gi|255575064|ref|XP_002528437.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223532113|gb|EEF33920.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 523

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 131/295 (44%), Positives = 174/295 (58%), Gaps = 6/295 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA AA  
Sbjct: 79  ETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFVTGTDEHGEKIAAAAAA 138

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +     D  S+++R +   L+ISYD FIRTT+ +H    +  + ++   GDIY+  Y
Sbjct: 139 CGSSPSEHCDVISQDYRTLWKDLEISYDKFIRTTDPKHEAIVKEFYSRVLANGDIYRADY 198

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y +  E+    D         P    +E+ YFF LS YQ  L      +P
Sbjct: 199 EGLYCVNCEEYKDAKELL---DNNCCPMHLKPCIERKEDNYFFALSKYQKLLEETLTENP 255

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG- 243
            F+ P  R NEV S++KSGLKD S+SR + DWGI +P+D +  +YVW DAL  Y++    
Sbjct: 256 NFVQPSFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSE 315

Query: 244 --YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
                N   + +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+
Sbjct: 316 DKEQPNLQNAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLGLPKMVFGHGFL 370


>gi|304314728|ref|YP_003849875.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588187|gb|ADL58562.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 652

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 266/528 (50%), Gaps = 41/528 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++I+ A+ Y N   H+GH     I AD+ AR+ RL G DVLF   TDEHG  IA  A++
Sbjct: 3   KVFITCALPYANGPTHLGHLRSTYIPADIYARYRRLRGDDVLFVCATDEHGTPIAVKAES 62

Query: 65  AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+   +V    N    RD+ +  DIS+D F RTT+  H++  +  + K+ +KG IY+  
Sbjct: 63  EGLKPIEVATRYNEMIKRDLEEC-DISFDSFTRTTDDLHYEIAQNFFLKLYEKGYIYEKD 121

Query: 124 YSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWMEEEG----------- 164
               Y    + +  D  V         +GA G +  +    ++ ++ E            
Sbjct: 122 IKQLYCNSCQRFLPDRYVEGICPHCGGEGARGDHCESCGRHLEPLQLEDPVCMVCGSEPV 181

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 YFFRLS +QDKL+ +     E  +P   +N  + +++ GL+D  L+R   DWG+
Sbjct: 182 VRDSRHYFFRLSQFQDKLMEWI---GESDMPSNVKNYALQWLREGLRDWILTRD-MDWGV 237

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHAIY 274
            +P   +   I+YVW +A   Y+++        G   + +W A  +H IGKDI+  HAI+
Sbjct: 238 PVPLEGNDGKIIYVWGEAFLGYISSAAAWSRKTGKPWREYWDAGAVHFIGKDIIYHHAIF 297

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L++    +P+ + +  ++  +G K+S S   V+   + +E    D LRY+L     
Sbjct: 298 WPALLMAYGCRIPENIIAGEYLSLEGRKMSTSKNWVVWTSDFLERFHKDLLRYYLTVNAP 357

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +  D  ++RVN +LA+ +GN + R+ S   + +DG +P P   T  DE  L+  
Sbjct: 358 LTRDTDFSWDDFQRRVNDELADVLGNFLHRTFSFTGRFFDGRVPEPSELTAEDEEFLNSI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R    + E ++N     A+  VI L  + ++YF+ Q+PW   K +P+RAST L++   +
Sbjct: 418 RRAPDTVGELLENFQFRDAMMSVIKLAKKGNKYFNDQEPWRAIKESPERASTCLHLCNLL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-----QRLKPGF 497
              L  LL  F+P  A ++  I+ + DE   F  L+     +R +P F
Sbjct: 478 AANLGKLLMPFMPSSAGRVLSIMNMEDEPWGFHELEAGRVIERARPLF 525


>gi|115625231|ref|XP_001204341.1| PREDICTED: similar to putative methionyl tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
 gi|115634863|ref|XP_782491.2| PREDICTED: similar to putative methionyl tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 305

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 122/285 (42%), Positives = 172/285 (60%), Gaps = 14/285 (4%)

Query: 18  AQPHIGHAYEMIIADVLARFHR-LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           ++PHIGH Y   +AD   R+ R L   D +F TGTDEHG K+ KAA+ AG     F ++ 
Sbjct: 19  SEPHIGHLYSACLADAAHRWQRILKAPDSIFATGTDEHGLKVQKAARTAGKEPLTFCNEV 78

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136
           S  FR + ++ +I Y DFIRTTE+RHH      W  + +KG IYKG Y GWYS+ DE++ 
Sbjct: 79  SHEFRRLFEMCNIGYTDFIRTTEERHHTAVHEFWTSLREKGFIYKGEYEGWYSVTDESFL 138

Query: 137 NDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
              ++ +     G   +      N V+W  E  Y FRLSA++DKLL + + +P  + P +
Sbjct: 139 TTSQIQEIDRGDGTTIKVSLESGNVVEWTSETNYMFRLSAFRDKLLRWLDDNPSAVQPAK 198

Query: 192 RRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
             + V  ++  G++DLS+SR+     WGI +PDDP   +YVW+DAL NYLT +GY D   
Sbjct: 199 FHSIVRHWLNEGIQDLSVSRQRDRLGWGIPVPDDPSQTIYVWMDALVNYLTVSGYPD--- 255

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
             +   WP   H++GKDIL+FHAIYWPAFL++A++  P  V  H 
Sbjct: 256 --RTHLWPP-THIVGKDILKFHAIYWPAFLMAADISPPASVICHS 297


>gi|326437155|gb|EGD82725.1| hypothetical protein PTSG_03376 [Salpingoeca sp. ATCC 50818]
          Length = 436

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/438 (34%), Positives = 230/438 (52%), Gaps = 34/438 (7%)

Query: 83  MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
           M  V ++    FIRTT   H       W+ I  KG I  G Y GWYS+ DEA+Y+  +V 
Sbjct: 1   MNGVCNVQPSRFIRTTSPEHKRAVDQFWRTIESKGHIRLGKYKGWYSVVDEAFYSAHQV- 59

Query: 143 KGADGQYYNAQH----NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           +   G   N +     + V+   E+ Y F L+A + K+  +  S P  + P   R++V+S
Sbjct: 60  EPDPGNPANMRAVETGSAVEEYTEDNYMFNLNAMKGKVREWLLSSPTTVYPSVYRHQVLS 119

Query: 199 FVKSG-LKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           F+    L DLS+SR   +  WGI +P +  + +YVW+DAL NYLT  GY D   G+    
Sbjct: 120 FLDDADLPDLSVSRLRSSLAWGIPVPTNENHTIYVWMDALVNYLTALGYPDQLTGT---- 175

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
              D HVIGKDIL+FHA+YWPAFLL+A L  P+++  HG     G K+SKS+GNV+DP+ 
Sbjct: 176 --LDTHVIGKDILKFHAVYWPAFLLAAGLNPPRRILVHGHWTVAGAKMSKSVGNVVDPLV 233

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY 373
             ++VG D LR++L++E   G D  +     K+R  A  +LAN  GNL+SRS    +   
Sbjct: 234 EADDVGSDLLRFYLLKEARLGSDADFSH---KRRDAAISELANNFGNLLSRSTGKRVNPT 290

Query: 374 DGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   P      T+ ++ +  V +   + ++E   +  +   + +++  + E ++YF   +
Sbjct: 291 NTYPPLADVKLTQREQHVADVINNTQRRVQELYASGDVGLGIEEILHCLREGNKYFQEME 350

Query: 433 PWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-- 485
           PW+L K   D A+       LY T E++R +++LL    P ++    D L VA  N    
Sbjct: 351 PWKLAKLKDDAAAQHRRLACLYTTYELLRVVSLLLCPVTPAISAACLDKLAVAPSNGSAF 410

Query: 486 FQSL-------DQRLKPG 496
            QSL          LKPG
Sbjct: 411 CQSLAFSYNKGGHALKPG 428


>gi|313611386|gb|EFR86080.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 242

 Score =  243 bits (620), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 113/242 (46%), Positives = 171/242 (70%), Gaps = 7/242 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ RL G DV + TGTDEHGQKI   A+  G++ + +VD+ +  F+++   L+IS  D
Sbjct: 1   MARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND---DEVYKGADGQYY 150
           FIRTT+ RH  +   +++++ ++GDIY G Y GWYS+ DE Y+ +   +EVYK  +G+  
Sbjct: 61  FIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVI 120

Query: 151 NAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKD 206
             +    N V+ ++EE   FR+S Y D+L+ YY SHPEFILP  R+NE+I +F+K GL+D
Sbjct: 121 GGKAPSGNEVELVKEESXXFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR TFDWGIK+P +P++++YVWIDAL+NY+T  GY  + D    K+WPAD+ ++GK+
Sbjct: 181 LAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKE 240

Query: 267 IL 268
           I+
Sbjct: 241 IV 242


>gi|321309548|ref|YP_004191877.1| methionyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801392|emb|CBY92038.1| methionyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 519

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 271/524 (51%), Gaps = 25/524 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +   +YI+T + YP+ +PH+GHA+ +++ADVL   ++  G       GTDEHG+K+  
Sbjct: 1   MAKDRSVYITTPLFYPSDKPHLGHAFTVVLADVLKLSYKQLGYGGYLVVGTDEHGEKMLA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A    + FV+ N  +F+ + + L I YD F+RT++  H    + ++ ++     I+
Sbjct: 61  AADAAQTPVERFVESNVLHFKSLWETLGIKYDRFVRTSDHAHRALVKQVFLQLLSDNQIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              + GWY    E  ++D  + K +         +P+    E+ YF R++++++ L   +
Sbjct: 121 IDEWRGWYCTSCEESFSDRFIGKKSTCPI----GHPLTLRAEKTYFLRVTSFRNWLRREF 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++ + I P + + E+++   + L DLS++R+  DWGIK+P+D  + +YVW DAL  YLT
Sbjct: 177 EANKDLIYPDKYKTELMNNFINDLDDLSITREGLDWGIKVPEDEDHTIYVWFDALIAYLT 236

Query: 241 -----------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
                      TT + +  + SK K     + +IGK++ RFHAIYWP  L +  + L   
Sbjct: 237 ALNFGNYGRTNTTTFKNYWESSKCKV----IQIIGKEVCRFHAIYWPIMLKNLKVRLFDN 292

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +  HG++L   EK+SKS  NVIDP E++  +  + LR++L R I+   D   + D +   
Sbjct: 293 LLVHGWLLMNNEKMSKSKKNVIDPKEILNLMPREGLRFYLAR-ISILGDANVNVDDIFSV 351

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQ 406
            N+ L N  GNL+SR   ++ + Y+  +P    P +F E D+  + +   +     + + 
Sbjct: 352 YNSYLVNTYGNLISRFYGIMGRKYENTLPNQWDPESFIEIDQLNIELDEFLNNGYEKEVL 411

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           N  I   + +V  +     +  +  K WEL+K +     T++    +++      L   +
Sbjct: 412 NNTISPIIEKVFEIFRSAGKLIEKNKAWELEKGDL-LLDTLMVFIYKLLCIGTWFLHPIL 470

Query: 467 PKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
              A K++DIL ++ +    + L  QRL     ++   + +FPR
Sbjct: 471 IDTAPKLYDILNISPKKVGIEYLQQQRLYFKKKINDLPENLFPR 514


>gi|15678615|ref|NP_275730.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122905|sp|O26687|SYM_METTH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2621666|gb|AAB85093.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 651

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 256/527 (48%), Gaps = 39/527 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++I+ A+ Y N   H+GH     I AD+ AR+ RL G DVLF   TDEHG  IA  A+ 
Sbjct: 3   KVFITCALPYANGPTHLGHLRSTYIPADIYARYRRLRGDDVLFVCATDEHGTPIAVKAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T      +     R   +  DIS+D F RTT++ HH+  +  + K+ +KG IY+   
Sbjct: 63  EGRTPLEVATRYHEMIRGDLERCDISFDSFTRTTDELHHEIAQKFFLKLYEKGFIYEKDI 122

Query: 125 SGWYSLRDEAYYNDDEV-----YKGADGQYYN-----AQH-NPVQW-------------- 159
              Y    + +  D  V     Y G++G   +      +H  P+Q               
Sbjct: 123 KQLYCGDCQRFLPDRYVEGTCPYCGSEGARGDHCEGCGRHLEPLQLEDPRCMVCGSEPEV 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   YFFRL+ +QD++  + E      +P   RN  I +++ GLKD  L+R   +WG++
Sbjct: 183 RDSRHYFFRLNQFQDEIREWIEGSE---MPSNVRNYAIQWLREGLKDWILTRD-MEWGVQ 238

Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHAIYW 275
           +P   +   I+YVW +A   Y+++        G   + +W +  +H IGKDI+  HAI+W
Sbjct: 239 VPLEGNEGKIIYVWGEAFLGYISSAAAWSKKTGRDWREYWDSGAIHFIGKDIIYHHAIFW 298

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++     P  + +  ++  +G+K+S S   V+   + +E    D LRY+L      
Sbjct: 299 PALLMAYGCRTPANIIAGEYLSLEGQKMSTSKNWVVWTSDFLERFDRDLLRYYLTVNAPL 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +  D  ++RVN +LA+ +GN + R+ S   + +DG +P  G  T  D   L    
Sbjct: 359 TRDTDFSWDDFQRRVNDELADVLGNFLHRTFSFTGRFFDGRVPAAGELTAEDLEFLESIR 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
                + E +       AL  +I L    ++YF+ Q+PW+  K +P RAST L++   + 
Sbjct: 419 AAHDTVAELLDKFQFRDALMHIIKLAKRGNKYFNDQEPWKAVKESPARASTCLHLCNLLA 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-----QRLKPGF 497
             L  LL+ F+P  A +I  I+ + DE   F  L      +R KP F
Sbjct: 479 ANLGKLLRPFMPSAAGRILSIMNLEDEAWGFHELREGQVIERAKPLF 525


>gi|302023995|ref|ZP_07249206.1| methionyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 487

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/345 (37%), Positives = 205/345 (59%), Gaps = 15/345 (4%)

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           ++ Y+ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDA
Sbjct: 1   MVEYFNAHPDFIQPDGRMNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDA 60

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP  +F+H
Sbjct: 61  LLNYATALGYGQEETINYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDLLFAH 120

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +
Sbjct: 121 GWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYE 180

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     R
Sbjct: 181 LANDLGNLLNRTVAMINKYFSGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPR 240

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKL 469
           AL  V +++S  ++Y D   PW L K   DR   A+ + ++T   +R +A L+Q F+   
Sbjct: 241 ALEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAG-LRVVAHLIQPFMMTT 299

Query: 470 ANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +      EN  F      L  G  +     PIFPR 
Sbjct: 300 SNAIMEQLGLGTAFDLENLDFAG----LPAGLTVVAKGTPIFPRL 340


>gi|76664782|emb|CAJ17829.1| methionyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 280

 Score =  236 bits (601), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 120/283 (42%), Positives = 182/283 (64%), Gaps = 6/283 (2%)

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           + NS   + + D++ +SYD FI+TT+K H  + + ++ K+  +GDIY G Y G YS+ +E
Sbjct: 2   NHNSSEIKRIYDLMQVSYDYFIKTTDKAHQASVQAIFDKLHQQGDIYLGRYQGLYSVAEE 61

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           AY ++ ++    DG+ +N +  P+  + E+ YFF+LS YQ KLL Y ES+P+ I P  +R
Sbjct: 62  AYISEKDL---VDGKTFNGE-TPI-LITEKTYFFKLSKYQSKLLDYLESNPDLIKPKTQR 116

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK- 252
            E+++ +K  L DLS+SR +F WGI +  + ++++YVWIDAL+NYLT  GY  N    + 
Sbjct: 117 KELLNLLKEPLDDLSISRTSFKWGIPVSFEQKHVIYVWIDALSNYLTGLGYHPNETSQQF 176

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             +WP DLHVIGKDILRFH IYWP  L++  + LPK+   H +IL    K+SKS GNV+ 
Sbjct: 177 LHYWPCDLHVIGKDILRFHLIYWPILLMALKIKLPKQFLIHPWILFDKNKMSKSKGNVLY 236

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
             ++++   VD +RYF++ EI    DG    + L +R N+DL 
Sbjct: 237 VDDLLKIFSVDTIRYFVLHEIPYANDGNITYELLAERHNSDLV 279


>gi|299748517|ref|XP_001839197.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298408008|gb|EAU82630.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 516

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 243/486 (50%), Gaps = 48/486 (9%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    GTDEHG KI +AA  A      F ++ S+ F+D++   +ISY  F RTT   H +
Sbjct: 15  VKLLVGTDEHGLKIQQAAAKASTEVLTFCNELSQVFKDLSKKANISYTTFSRTTGDNHKE 74

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQ 158
               +W+ + DKG IYKG Y GWYS+ DE +Y   ++ +       N ++      + V+
Sbjct: 75  LVAQVWRTLLDKGYIYKGEYEGWYSITDECFYTSAQIVQSPTSTAENPEYVSKETGSKVE 134

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSG--LKDLSLS- 210
           W +E  Y FRLS ++D L+ +Y S    + P +  + V+  +      SG  L D+S+S 
Sbjct: 135 WSKEYNYMFRLSMFRDALVKHY-SDRSVVQPSQYNSVVLQMLGATEDSSGVELADISISR 193

Query: 211 -RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDIL 268
            R    WGI +P+DP++ +YVW DAL  YL+  GY +  P       WP +L VIGKDIL
Sbjct: 194 PRSRLTWGIPVPNDPEHTVYVWFDALLIYLSGVGYQVSGPPAVTG--WPPNLQVIGKDIL 251

Query: 269 RFHAIYWPAFLLSANLP-------------------LPKKVFSHGFILHKGEKISKSLGN 309
           RFHA+Y PA L++   P                   LPK + +H       +K+SKS+GN
Sbjct: 252 RFHALYLPAILMALGAPSHAALKDLSATQILEKSVGLPKTLLTHAHWTVSQQKMSKSVGN 311

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVS-R 364
           V+DP++ +++ G+D +R++L R     +D     F   +   K + + L N +  + S R
Sbjct: 312 VVDPMQSVDKYGLDIVRFYLARVGGRFRDDVDWSFEQLEKHSKELQSLLGNYLLRITSAR 371

Query: 365 SVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +     Y+     +P A        +    R +QE+  N++   +  AL+ ++ ++  
Sbjct: 372 ITAAAAAGYEQQSEASPHALNLELAREVDALPRRVQELMNNLE---VADALSSILDVLKL 428

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            ++      PW  K  +P          ++ +R   I LQ FVP+ + ++ D L +A E+
Sbjct: 429 ANKVITDIAPWS-KTCSPALVYETRRTALDTLRVTGICLQPFVPETSERLLDALGLAPED 487

Query: 484 RCFQSL 489
           R ++S+
Sbjct: 488 RTWRSI 493


>gi|297669112|ref|XP_002812750.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2
           [Pongo abelii]
          Length = 542

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 231/507 (45%), Gaps = 93/507 (18%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 64  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      DQ S  F+ +     IS+                  W K  +       
Sbjct: 124 ATAGLAPTELCDQVSEQFQQLFQEAGISFS-----------------WTKEEN------- 159

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179
                Y  R   +    + +   + Q    +   H  +QW++EE          D  +S 
Sbjct: 160 -----YIFRLSQFREPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSR 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             SH                                WGI +P D    +YVW+DAL NYL
Sbjct: 207 RSSH------------------------------LHWGIPVPGDDSQTIYVWLDALVNYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H      
Sbjct: 237 TVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVC 293

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G
Sbjct: 294 GQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALG 353

Query: 360 NLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRENM 405
            L++R  +  +   + Y     T     PG    S      D +++S  + + +++ ++ 
Sbjct: 354 GLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQVADHY 413

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462
            N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    LL
Sbjct: 414 DNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLL 473

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
           Q   P LA+K+   L V+   R    L
Sbjct: 474 QPVTPSLADKLLSRLGVSASERSLGEL 500


>gi|297264627|ref|XP_002799060.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2
           [Macaca mulatta]
          Length = 522

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 232/500 (46%), Gaps = 93/500 (18%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAAQN 64
           Y +T I Y NA PHIGH Y  ++AD L+R  RL G       F+TGTDEHG KI +AA  
Sbjct: 46  YFTTPIFYVNAAPHIGHLYSALLADALSRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+      D+ S++F+ +     IS+                  W K  +         
Sbjct: 106 AGLAPTELCDRVSKHFQQLFQEAGISFS-----------------WTKEEN--------- 139

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              Y  R   +    + +   + Q    +   H  +QW++EE          D  +S   
Sbjct: 140 ---YIFRLSQFREPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSRRS 188

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SH                                WGI +P D    +YVW+DAL NYLT 
Sbjct: 189 SH------------------------------LHWGIPVPGDDSQTIYVWLDALVNYLTV 218

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H      G+
Sbjct: 219 IGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVCGQ 275

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G L
Sbjct: 276 KMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALGGL 335

Query: 362 VSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRENMQN 407
           ++R  +  +   + Y     T     PG    S      D +++S  + + +++ ++  N
Sbjct: 336 LNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSSVATLPKQVADHYDN 395

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQA 464
             I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    LLQ 
Sbjct: 396 FQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLLQP 455

Query: 465 FVPKLANKIFDILFVADENR 484
             P LA+K+   L V+   R
Sbjct: 456 VTPSLADKLLSRLGVSASER 475


>gi|71992781|ref|NP_740948.2| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
 gi|31442025|emb|CAD21672.2| C. elegans protein Y105E8A.20a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 406

 Score =  230 bits (587), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/401 (34%), Positives = 213/401 (53%), Gaps = 44/401 (10%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYF 166
           KI D G IYK  YSG+YS+ DE +  +++V K     GA+     +   PV+W+EEE Y 
Sbjct: 2   KIQDNGYIYKSTYSGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYM 61

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSR--------KTFD 215
           FRLS +++K+  +          I R N V+    +    L  L +S             
Sbjct: 62  FRLSEFREKVAEW----------INRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLS 111

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
           WGI +P+DP   +YVW+DAL NYLT TG+   P+      WP    VIGKDI +FH  YW
Sbjct: 112 WGIPVPNDPTQTIYVWLDALVNYLTVTGF---PNAQSV--WPPTCQVIGKDITKFHLYYW 166

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PAFL++A L LP+KVF HG  L    K+SKSLGNV++P E I +   + LRYFL++    
Sbjct: 167 PAFLMAAGLSLPQKVFIHGHWLIDNVKMSKSLGNVVNPSEAITKFTAEGLRYFLLKHGNP 226

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVC 394
             D  ++ +   + +N+DL N +GNL++RS V  I K  +GM P      + +  I    
Sbjct: 227 SYDCSFNWNSCLQTINSDLVNNVGNLLNRSTVEKINK--EGMYPK-MEIEDIEAEIRENA 283

Query: 395 SRVLQEIRENMQNQL-------IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            ++++ + E+ +N +         + +  ++  + E +R F + +PW  K+ +  R  ++
Sbjct: 284 KKLMEMVEESRENCVDLYDEMSYFKIIENLMLTMKEANRLFQSSQPW--KEIDEKRLKSL 341

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           L+VT + IR + ILLQ   PK+A    + L V    R  ++
Sbjct: 342 LFVTYDTIRVVTILLQPITPKMAEFCLNRLGVPKNERNLEN 382


>gi|71034183|ref|XP_766733.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353690|gb|EAN34450.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 563

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 236/469 (50%), Gaps = 18/469 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  I+T + Y N  PH+GHAY ++ +DVL RF  L G D     GTDEHG KI   A N
Sbjct: 71  NKYLITTPLFYLNGPPHLGHAYTLVSSDVLKRFLILSGHDCKLLAGTDEHGSKIKTTAAN 130

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + K +V      F  +    DI+ +  + T+E  H    + ++    + G IY+G +
Sbjct: 131 FGYSPKEYVISMRNQFFKLYKAYDITPEIVVHTSENEHKSKVKRVFDNFLESGHIYRGLH 190

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G++S +++ YY + ++  G     ++     V  ++E  YFF+L  ++ KL+ +++   
Sbjct: 191 RGYFSPKEDLYYTESKLINGKSPLGFD-----VTLVDEPAYFFKLDIWKRKLVEFFKD-S 244

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           E ILP    NEV   ++S + D++++R   DWGI I +     +YVW DAL  YLT    
Sbjct: 245 EVILPQHSLNEVRKLLQSEINDIAITRSNCDWGIPITNSGNETVYVWFDALLGYLTHLHS 304

Query: 245 LDNPDGSKAKFWPAD-LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
               + S +       +HVIGKDIL FH I WPA L++  L +  +   HG++L+KGEKI
Sbjct: 305 FPPLEQSNSNLNGLKIIHVIGKDILTFHTILWPAILMALKLDIKLRFLVHGWLLNKGEKI 364

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL N I P+     V  D  R+ L+       D  +D       +   L N   N   
Sbjct: 365 SKSLNNSISPLNT--SVPSDVSRFALMNLGDFSYDFEFDPSMFDNALKT-LRNKFANTFY 421

Query: 364 RSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  S++ +   D + P      + D  +L   ++  +EIR ++Q+  + R +  ++ + S
Sbjct: 422 RVTSILQMNKVDTVQP-----CDCDHKLLEKFNKYSEEIRNSVQSFRLDRYIQILVEMSS 476

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           EV+++ +  + W +   +    ++  ++   ++  ++I L    PKLAN
Sbjct: 477 EVNKFIELTQFWTMSSQSELLNTS--WICCTLLLYISIYLAPITPKLAN 523


>gi|240281239|gb|EER44742.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 325

 Score =  229 bits (585), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 118/276 (42%), Positives = 165/276 (59%), Gaps = 11/276 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 52  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 111

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN + F+++A   ++ YD FIRTT+  H +  R  W  ++ +G IY 
Sbjct: 112 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 171

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V    D                VQW  EE Y FRLSA+Q+ 
Sbjct: 172 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSAFQEP 231

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P+F+ P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 232 LLEHFRKNPDFVTPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 291

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           AL NY+T  GY   P G+++  WPAD+ V+GKDILR
Sbjct: 292 ALVNYITYAGY-PFPPGAQS-IWPADVQVVGKDILR 325


>gi|302662778|ref|XP_003023040.1| hypothetical protein TRV_02862 [Trichophyton verrucosum HKI 0517]
 gi|291187016|gb|EFE42422.1| hypothetical protein TRV_02862 [Trichophyton verrucosum HKI 0517]
          Length = 474

 Score =  229 bits (584), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 187/342 (54%), Gaps = 16/342 (4%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214
           V++ +E  Y F+LSA+QD+LL +Y  +P+FI P    + ++  V SGL+DLS+SR     
Sbjct: 94  VKFSQETNYHFKLSAFQDRLLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRL 153

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
            WGI +P D    +YVW+DAL NY+T  GY   P   +   WPAD+HV+GKDI RFH IY
Sbjct: 154 SWGIPVPGDTTQTIYVWLDALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRFHCIY 213

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPAFL++ +LPLP+ + +H        K+SKS GNV++P+  +   GVD +R++L     
Sbjct: 214 WPAFLMALDLPLPRTILTHAHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGG 273

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS----MILKDYDGMIPTPGAFTESDESI 390
              D  YD   + +     L  G+GNL SR +      + +    M    G+    D S 
Sbjct: 274 LASDTDYDNSYIVRDYKNILQGGLGNLCSRVMRGKGWNVRESVVKMTNGQGSRRAKDPSE 333

Query: 391 ---LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP--- 441
              +    +V   +   M      RAL +++ ++ + +RY  +  PW L K   T+P   
Sbjct: 334 IEHMEFLEKVPGLVSNQMNELNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEAGTDPTAH 393

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           D+   V+Y   E +R   ILLQ F+P+ A K+ D+L V +EN
Sbjct: 394 DQLVGVIYNATESLRIAGILLQPFMPEKAKKLLDMLGV-EEN 434


>gi|70941249|ref|XP_740936.1| methionine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56518992|emb|CAH87109.1| methionine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 504

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 191/311 (61%), Gaps = 7/311 (2%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           +S YQD+LL +   +P++I P + RNE++  +K  L+DLS SR  F WGI +P+DP+++M
Sbjct: 1   MSKYQDRLLQHIHDNPDYIQPEKNRNEILQRLKEPLEDLSCSRTKFSWGIPVPNDPKHVM 60

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288
           YVW+DAL NY +   +++  D  K K+WP D+ +IGKDI+ FHA+ +P  L+S N+ LPK
Sbjct: 61  YVWMDALINYYSNC-FIN--DQEKMKYWPPDIQIIGKDIVWFHAVIFPTILMSVNIELPK 117

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            VFSHGF+L   G+K+SKSL NVIDP E+IE  G DA R+ +V+E   G D  +D D L 
Sbjct: 118 CVFSHGFVLASDGKKMSKSLKNVIDPKEIIEAYGSDAFRFHVVKESKTGYDMRFDIDNLV 177

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              N+DLA+ IGNLV R++S+     +  I  P  + + D  +       +  I   M+N
Sbjct: 178 DMCNSDLADTIGNLVQRTLSLCFLSNNAKI--PPLYDDIDIELPFCMLHFINRIEYYMKN 235

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +H+   + +++  +++++     PW+ K+ +  ++   ++ + +E I  +A  +   V
Sbjct: 236 FRVHKFCEKTVNVCKDLNKFLTDLAPWKYKQESEQNKKLHIIRLMLESIYFIAHYIDIVV 295

Query: 467 PKLANKIFDIL 477
           P +A++IF  L
Sbjct: 296 PTIASQIFSQL 306


>gi|325959090|ref|YP_004290556.1| methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330522|gb|ADZ09584.1| Methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 658

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/502 (30%), Positives = 250/502 (49%), Gaps = 33/502 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ IS+A+ Y N   H+GH     I AD+ AR++R+ G DVLF   TDEHG  IA  A+ 
Sbjct: 3   KVLISSALPYANGPCHLGHLRSTYIPADIYARYNRMKGNDVLFVCATDEHGTPIAVKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   K    +     +   +  +IS D F RTT+ +H++  +  + K+ +KG IY+   
Sbjct: 63  EGKPPKEVAGRYHEMIKTDLESCNISLDSFTRTTDPKHYEISQNFFLKLYEKGYIYEKVI 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA--QH-NPVQWMEEEG--------- 164
              Y      +  D  V         +GA G +  +  +H  P Q +E +          
Sbjct: 123 KQPYCEECGRFLPDRYVEGTCPFCETEGARGDHCESCGRHLEPTQLLEPQCQICGSTPEI 182

Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+LS +QD+L  + E + E  LP   RN  + ++K GLKD  L+R   +WGI 
Sbjct: 183 RESKQYFFKLSHFQDQLQEWIEGNHE--LPPNVRNYALQWLKEGLKDWILTRD-MEWGIP 239

Query: 220 IPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-PADLHVIGKDILRFHAIYW 275
           +P +     I+YVW +A   Y+++        G    ++W    LH IGKDI+  H+I+W
Sbjct: 240 VPLEGAEGKIIYVWGEAFLGYISSAAQWSEKTGKPWEEYWNDRPLHFIGKDIIYHHSIFW 299

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++    LP  V +  ++  +G K+S S   VI   + I+    D LRY+LV     
Sbjct: 300 PALLMAYGCKLPYTVIAGEYLSLEGSKMSTSKNWVIWVSDFIKNFDSDILRYYLVANAPL 359

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  D  ++RVN +LA+ IGN + R+ +   + +DG +P PG F + D    +   
Sbjct: 360 SKDTDFSWDDFQRRVNDELADVIGNFLHRTFTFTNRFFDGKLPAPGEFDDYDREFETKIK 419

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + +   ++       + ++I L    ++YF+ ++PW+  KT+   A+  LY+  ++ 
Sbjct: 420 ALPKLVGGLIEEFKFREGMMEIIKLSKYGNKYFNDKEPWKAVKTDKAGAANCLYLANQLA 479

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           + LA+ L  ++P    +IF  L
Sbjct: 480 KTLAVSLTPYLPVKTLEIFKTL 501


>gi|312069747|ref|XP_003137826.1| methionyl-tRNA synthetase [Loa loa]
 gi|307767008|gb|EFO26242.1| methionyl-tRNA synthetase [Loa loa]
          Length = 500

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 232/492 (47%), Gaps = 81/492 (16%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-----DGLDVLFTTGTDEHGQKI 58
           R K +I+T I Y N  PHIGH Y  ++AD   R+  L     D  D LFTTGTDEHG KI
Sbjct: 14  RLKHFITTPIFYANGPPHIGHLYTALLADASNRWRLLRDGNADLDDSLFTTGTDEHGLKI 73

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            + A  AG   + + D  S  F+D+     I  +DFIRTTE RH +      +++  +G 
Sbjct: 74  QQTATAAGCDPQSYCDNMSDKFKDLFCAFGIQPNDFIRTTETRHKE------EELDKRGQ 127

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADG----------QYYNAQHN--------PVQWM 160
           I +G + GWYS  DE +Y  DEV K ++            Y     N         V+W+
Sbjct: 128 IQQGKHEGWYSTTDECFYASDEVEKLSEQNSMIKMNRYVHYIVEDKNLVSKITGSVVEWV 187

Query: 161 EEEGYFFRLSAYQDKLLSYYES----HPEFILPIERRNEVISFVKSGLKDLSLS--RKTF 214
           +EE Y F LS Y  K+ S+  S     P+   P   +   I       ++LS+S  RK  
Sbjct: 188 QEENYVFPLSKYLGKVRSWLSSCDIIRPKVYFPEAFQQASIE------RNLSMSRDRKRV 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
            WGI +P+D    +YVW DAL +YLT +                              + 
Sbjct: 242 TWGIAVPNDESQTIYVWFDALISYLTVS------------------------------VI 271

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPAFL++ +LPLPK++F H   L  G K+SKS+GNV+DP    + +  + LRYFL+R+  
Sbjct: 272 WPAFLIALDLPLPKRIFVHSHWLVNGAKMSKSVGNVVDPFIASKSLSEEGLRYFLLRQGT 331

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL---KDYDGMIPTP--GAFTESDES 389
              D  +        +N DL N +GNL+ RS    L   + Y    P     +  E  E 
Sbjct: 332 PQNDANFTMLKAINVINTDLINNVGNLLQRSTIEKLNPSQRYPAFYPDSFHNSLLELGEP 391

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVL 448
           ++   + + +   E     +I++AL  ++ ++ + + +F   +PW EL     DR   V 
Sbjct: 392 LVHSVNSLAELYEEQFDELMIYKALELLMEVMRQANGFFQFYEPWNELD----DRKPAVP 447

Query: 449 YVTVEVIRQLAI 460
           +    ++ +L I
Sbjct: 448 HYADHLLNRLGI 459


>gi|70949093|ref|XP_743989.1| tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56523747|emb|CAH77597.1| tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 559

 Score =  224 bits (571), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 253/526 (48%), Gaps = 67/526 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAKAA 62
           L I+T I Y N +PHIGHAY  ++ DV+ RF ++    +   ++F +G DEHG KI    
Sbjct: 1   LVITTPIYYGNDKPHIGHAYCNVLVDVIYRFEKIKDNENKKKIIFFSGMDEHGLKIDSKT 60

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   +    +++  S  ++ M  +L +  + F RT+   H    + +WK +  KG IYK 
Sbjct: 61  KKLNMDKTNYLNNISEYYKKMNKMLSVDINLFYRTSNVFHKTFVQHVWKYLLSKGYIYKD 120

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+YS+ +E Y +D EV K    +   A +  +   EE  YFF ++ ++D L+++Y++
Sbjct: 121 VYKGYYSISEERYLSDREVEKMKSEENNTAANRIIYIEEENSYFFDVNKFKDFLINFYKT 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +   I P   + E+   +++  K++ +SR   +WGIKIP + +  +YVW +AL +Y+++ 
Sbjct: 181 NESIIFPSYLKKEIEYHIENDFKNVCISRYNTEWGIKIPGEEKGTIYVWFEALLSYISSI 240

Query: 243 --------------------------------------------------GYLDNPDGSK 252
                                                              YL+NP    
Sbjct: 241 LYVIKKYESSKISSTLPQSKTQEEDNIVCSYEDVLSLVNSCTSVDSRENDAYLENPIMDD 300

Query: 253 A--------KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                    K W   + VIGKDIL+FH I +   L S  + +P+ +  HG I  +  KIS
Sbjct: 301 KICSRKLFEKLWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKIENIKIS 360

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL N++ P  ++E+   D +R + +      +D  + +  L +     L N +GNL+ R
Sbjct: 361 KSLNNIVSPFTLLEKYDKDVIRLYFIGSGNIYEDKNFKESNL-ETFELFLRNSVGNLLYR 419

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +VS+ +++   +I     F  +  +        L ++ ENM+  L+   L +++ LV ++
Sbjct: 420 TVSLCIENNYKIIKKHYLFNFTILNEFKSDKTNLIKLFENMEYPLL---LEKLMILVKKI 476

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++YF   +PW  K  +    + ++Y T E I+  +I +  F+P ++
Sbjct: 477 NKYFVHNEPWN-KLNDSKNFNLIIYETFECIKFFSIFMYPFIPNIS 521


>gi|167933048|ref|ZP_02520135.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7b]
          Length = 336

 Score =  224 bits (571), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 182/316 (57%), Gaps = 20/316 (6%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPD 222
           Y+FRL+ +  ++ +  E++   I P  R+ EV++ +  G++DLS+SR  K   WG+ +P 
Sbjct: 2   YYFRLTHFVPQIRNAIENNEIKIFPESRKKEVLNLLNDGIEDLSVSRPRKNLAWGVSVPG 61

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           D   ++YVWIDAL+NY+T  GY D  D S   +WPA++ V+GKDILRFHAI WPA L++ 
Sbjct: 62  DDNQVIYVWIDALSNYITVLGYPD--DESWRDYWPANVQVVGKDILRFHAIIWPAILMAL 119

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            LPLPK++  HG I   G+K+SKSLGNV+ P EVI+  G DA RY+  R+I    DG + 
Sbjct: 120 GLPLPKQILVHGHIGFDGKKMSKSLGNVVSPNEVIDTYGADAFRYYFRRQIPTLDDGDFT 179

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  +K  N +L N +GNLV R   M+L+   G++   G     +  I        Q  R
Sbjct: 180 WEKFEKAYNNELGNDLGNLVQRVAKMVLRYQAGVV---GELNRGEHDI--------QLYR 228

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-----VLYVTVEVIRQ 457
           + M       A+ QV   +   ++Y +  KPWE+ K   D  ST     +L   V  I Q
Sbjct: 229 DAMDEMRFSDAIDQVWGKIRATNQYLEQVKPWEVAKNKDDPESTEHLSDILQDAVGSIMQ 288

Query: 458 LAILLQAFVPKLANKI 473
           +A LL  F+P+ ++KI
Sbjct: 289 IADLLVPFLPEASSKI 304


>gi|57640984|ref|YP_183462.1| methionyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68749280|sp|Q5JDZ7|SYM_PYRKO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57159308|dbj|BAD85238.1| methionyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 741

 Score =  223 bits (568), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 266/549 (48%), Gaps = 56/549 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G +VLF  GTDEHG  I   A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEGR 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   + +   +   IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEHIKTTFERAKISFDFFGRTELPVHYRLSQEFFLKALENGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q                      N   NP+ + + 
Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGHPLTPEILINPRCNICGNPITFKDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ R+  ++++L  + ES   +   +  RN V+ ++  GL++ +++R   DWGI +P 
Sbjct: 186 AHYYIRMQDFEERLKKWVESQEHWKPNV--RNTVLGWINEGLEERAITR-DLDWGIPVPL 242

Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW------PADLHVIGKDILR 269
           D +     ++YVW +A   Y++ T      +G +    KFW         +H IGKD + 
Sbjct: 243 DDEDVKGKVLYVWFEAPIGYISITIEHLKREGKENEWKKFWLNLDGETKVIHFIGKDNIP 302

Query: 270 FHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           FHAI+WPAFL++          A   LP  + ++ ++  +G+K S S    I   E ++ 
Sbjct: 303 FHAIFWPAFLMAYGKYRDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEFLDV 362

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY+L   +   +D  +  +  KK++N +L N +GN V R+++ + + +DG++P 
Sbjct: 363 WPADYLRYYLTAIMPETRDSDFSFEDFKKKINEELVNNLGNFVHRAMTFVNRYFDGVVPE 422

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D   L    +  +E  E + N     AL +V+ L    +RYFD QKPW+  K 
Sbjct: 423 RGELNDLDRQALEEIEKAFKETGELISNYRFKDALKRVMELAIFGNRYFDYQKPWKTAKE 482

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSL--DQRLKPG 496
           N +R +T + V++++++ L ILL+ F+P  + KI+ +L + +  +  F+ L    R++  
Sbjct: 483 NRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEEVKKWSFEELPAGHRVRKA 542

Query: 497 F-MLHKTFD 504
           F M  K  D
Sbjct: 543 FPMFRKVTD 551


>gi|312136830|ref|YP_004004167.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224549|gb|ADP77405.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 550

 Score =  223 bits (567), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 267/537 (49%), Gaps = 41/537 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++++ A+ Y N   H+GH     I AD+ +R+ R+ G DVLF   TDEHG  IA  A+ 
Sbjct: 2   KIFVTCALPYANGPLHLGHLRSTYIPADIYSRYQRMVGNDVLFVCATDEHGTPIAVKAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G        +  +  +   D  DIS+D+F RT+   H+   +  + K+  KG IY+   
Sbjct: 62  EGKDPLEITTKYYKKIKSDLDKCDISFDNFSRTSSDIHYKVAQNFFLKLYKKGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME--------------- 161
             +Y    + +  D  V         +GA G +       ++ +E               
Sbjct: 122 KQFYCTNCKRFLPDRYVEGICPYCDSEGARGDHCEVCGRHLEVLELIKPRCILCSGEPEI 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + YFF+LS +Q KL  + E++ E  LP   +N  + ++K GL D  ++R    WG+ 
Sbjct: 182 RKSKHYFFKLSKFQKKLKEWVENNEE--LPSNVKNYTLEWLKEGLNDWIMTR-DMKWGVP 238

Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHAIYW 275
           +P  D    ++YVW +A   Y+++       +    K +W +  +H IGKDI+  H I+W
Sbjct: 239 VPLEDAEGKVIYVWGEAFLGYISSAIEWSKKNKKDWKEYWDSGAIHFIGKDIIYHHTIFW 298

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++    LP+ V +  ++  +G+K+S S   V+   + ++    D LRY+L      
Sbjct: 299 PAMLMAYGCKLPRTVIAGEYLSLEGKKMSTSKNWVVWVSDFLKRFDSDLLRYYLTINAPL 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILS 392
            +D  +  D  ++RVN +LA+ +GN + R++    + +D  IP P  F E D   E  + 
Sbjct: 359 TRDTDFSWDDFQRRVNDELADILGNFIHRALMFTYRFFDAKIPEPSEFGEKDIEFEERIK 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              +++    EN +       L +++ L  + ++YF+ Q+PW+  K N  +A+T +Y+  
Sbjct: 419 ESPKIVGNFIENFK---FRDGLIEIMKLARDGNKYFNDQEPWKTFKENKYKAATCIYLCD 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + ++ + +L++ ++PK ++ I  +L + D  R ++  ++ ++P   ++K   P+F +
Sbjct: 476 QAVKAIGVLIKPYLPKTSSNILSMLNLDDNVR-WEDANEFIEPNHKINKP-KPLFSK 530


>gi|194376120|dbj|BAG62819.1| unnamed protein product [Homo sapiens]
          Length = 520

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 229/507 (45%), Gaps = 95/507 (18%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS                   W K  +       
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGIS-------------------WTKEEN------- 137

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179
                Y  R   +    + +   + Q    +   H  +QW++EE          D  +S 
Sbjct: 138 -----YIFRLSQFRKPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSR 184

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             SH  + +P+                              P D    +YVW+DAL NYL
Sbjct: 185 RSSHLHWGIPV------------------------------PGDDSQTIYVWLDALVNYL 214

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H      
Sbjct: 215 TVIGY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSHWTVC 271

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G
Sbjct: 272 GQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALG 331

Query: 360 NLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILSVCSRVLQEIRENM 405
            L++R  +  +   + Y     T     PG    S      D +++S  + + +++ ++ 
Sbjct: 332 GLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQVADHY 391

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462
            N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    LL
Sbjct: 392 DNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLL 451

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
           Q   P LA+K+   L V+   R    L
Sbjct: 452 QPVTPSLADKLLSRLGVSASERSLGEL 478


>gi|325990111|ref|YP_004249810.1| methionyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323575196|emb|CBZ40861.1| Methionyl-tRNA synthetase [Mycoplasma suis]
          Length = 507

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 251/484 (51%), Gaps = 38/484 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ + I+T + Y +  PHIGHAY +II D++ ++H L  +      G DEHG+KI   A 
Sbjct: 2   KKDVLITTPLFYSSGDPHIGHAYTLIIGDLIKKYHELVNIKANLLAGVDEHGEKILTKAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T + FV++NS  F++++  L+IS D F+RTT   H +  + ++K++ + G IYK  
Sbjct: 62  EVGLTVEEFVEKNSSKFKNLSSTLEISPDYFVRTTNDFHKEYAKKVFKELLELGKIYKSS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW------MEEEGYFFRLSAYQDKLL 177
           +SG+  +  E  Y++         +YY +Q N  +        EE+ YFF+++ +   L 
Sbjct: 122 WSGYKCINCETNYSN---------KYY-SQKNKCELGHELIKKEEDTYFFKITEFVSWLK 171

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +Y ++   I P     ++       L+DLS++R   DWGIK+ D P++ +YVW +AL  
Sbjct: 172 EHY-ANKNIIFPARYLKDLHEGFFPSLEDLSITRSKLDWGIKLDDSPEFTLYVWFEALLG 230

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y++T       D  + K W        + +IGK+I RFH+IY+PA L    L  P K+  
Sbjct: 231 YIST-------DSVREKHWLTSSDTKIIQIIGKEIFRFHSIYYPAILSLKKLKTPDKLLV 283

Query: 293 HGFILHKGEKISKSLGN--VIDPI-EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           HG++L+   KISKS  N   I P+  +IE+  +++++++ +  +   +D  + +D LK+ 
Sbjct: 284 HGWLLNDNRKISKSDPNSKAIPPLNSLIEQYNLESIKWYFLS-LNWEEDHPFSEDLLKQS 342

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQ 408
            N  L N +GNL++R   +I K           F  E  +  + + +  L ++ + + N 
Sbjct: 343 YNKYLVNLLGNLINRFKGIISKQEYITSSINSEFKNEQIKKEIELSNEFLTKLTDLVINI 402

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            I   +++   L++  +   +  +PW+L K + D       + V + RQL ++     P 
Sbjct: 403 KIPEIISRAKQLLNSANFLLNHLEPWKLPKDSQDYKE----INVFLYRQLILISFLLSPI 458

Query: 469 LANK 472
              K
Sbjct: 459 FTEK 462


>gi|325973668|ref|YP_004250732.1| methionyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323652270|gb|ADX98352.1| methionyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 507

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 251/484 (51%), Gaps = 38/484 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ + I+T + Y +  PHIGHAY +II D++ ++H L  +      G DEHG+KI   A 
Sbjct: 2   KKDVLITTPLFYSSGDPHIGHAYTLIIGDLIKKYHELVNIKANLLAGVDEHGEKILTKAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T + FV+QNS  F++++  L+IS D F+RTT   H +  + ++K++ + G IYK  
Sbjct: 62  EVGLTVEEFVEQNSSKFKNLSSTLEISPDYFVRTTNDFHKEYAKKVFKELLELGKIYKSS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW------MEEEGYFFRLSAYQDKLL 177
           +SG+  +  E  Y++         +YY +Q N  +        EE+ YFF+++ +   L 
Sbjct: 122 WSGYKCINCETNYSN---------KYY-SQKNKCELGHELIKKEEDTYFFKITEFVSWLK 171

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +Y+ + + I P     ++       L+DLS++R   DWGIK+ D P++ +YVW +AL  
Sbjct: 172 EHYK-NKDIIFPARYLKDLHEGFFPSLEDLSITRSKLDWGIKLDDSPEFTLYVWFEALLG 230

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y++T       D  + K W        + +IGK+I RFH+IY PA L    L  P K+  
Sbjct: 231 YIST-------DSVREKHWLTSSDTKIIQIIGKEIFRFHSIYCPAILSLKKLKTPDKLLV 283

Query: 293 HGFILHKGEKISKSLGN--VIDPI-EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           HG++L+   KISKS  N   I P+  +I++  +++++++ +  +   +D  + +D LK+ 
Sbjct: 284 HGWLLNDNRKISKSDPNSKAIPPLNSLIKQYNLESIKWYFLS-LNWEEDHPFSEDLLKQS 342

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQ 408
            N  L N +GNL++R   +I K           F  E  +  + + +  L +  + + N 
Sbjct: 343 YNKYLVNLLGNLINRFKGIISKQEYITSSINSEFKNEQIKKEVELSNEFLTKFTDLVINI 402

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            I   +++   L++  + + +  +PW+L K + D       + V + RQL ++     P 
Sbjct: 403 KIPEIISRAKQLLNSANFFLNHLEPWKLPKDSQDYKE----INVFLYRQLILISFLLSPI 458

Query: 469 LANK 472
              K
Sbjct: 459 FTEK 462


>gi|296205178|ref|XP_002749648.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 2
           [Callithrix jacchus]
          Length = 522

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 230/507 (45%), Gaps = 93/507 (18%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRSPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS+                  W K  +       
Sbjct: 104 ATAGLAPTELCDRISEQFQQLFQEAGISFS-----------------WTKEEN------- 139

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSY 179
                Y  R   +    + +   + Q    +   H  +QW++EE          D  +S 
Sbjct: 140 -----YIFRLSQFREPLQRWLRGNPQAITPEPFHHVVLQWLDEE--------LPDLSVSR 186

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             SH  + +P                              +P D    +YVW+DAL NYL
Sbjct: 187 RSSHLHWGIP------------------------------VPGDDSQTIYVWLDALVNYL 216

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H      
Sbjct: 217 TVIGY---PNAEFKFWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVC 273

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G
Sbjct: 274 GQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALG 333

Query: 360 NLVSRSVSMILKDYD-------GMIPT-PGAFTES------DESILSVCSRVLQEIRENM 405
            L++R  +  +   +          P+ PG    S      D +++S  + + + + ++ 
Sbjct: 334 GLLNRCTAKRINPSETYPAFCTNCFPSEPGLMGPSVRAQAEDYALVSAVATLPKRVADHY 393

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462
            N  I++AL  V S V + + +     PW+L   +P  A   STVL+V +E +R    LL
Sbjct: 394 DNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWDSPVDAPWLSTVLHVALECLRVFGTLL 453

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
           Q   P LA+K+   L V+   R    L
Sbjct: 454 QPVTPSLADKLLSRLGVSVSERSLGKL 480


>gi|288560216|ref|YP_003423702.1| methionyl-tRNA synthetase MetG [Methanobrevibacter ruminantium M1]
 gi|288542926|gb|ADC46810.1| methionyl-tRNA synthetase MetG [Methanobrevibacter ruminantium M1]
          Length = 691

 Score =  220 bits (561), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 250/511 (48%), Gaps = 40/511 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++IS A+ Y N   H+GH     I AD+ AR++R+ G DVL    TDEHG  IA  A  
Sbjct: 3   KIFISCALPYANGPCHLGHLRSTYIPADIYARYNRMAGNDVLMVCATDEHGTPIAVKADA 62

Query: 65  AGV----TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            G       K + D  +R+     +  DIS D+F RT+++ H+   +  +  + +KG IY
Sbjct: 63  EGKKPIEVAKRYHDMIARDI----ESCDISLDNFARTSDELHYKISQDFFLYLYEKGLIY 118

Query: 121 KGCYSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEG------ 164
           +      Y    E +  D  V           +G   +       P + +E         
Sbjct: 119 EEAIQQLYCENCEKFLPDRYVEGICPVCGAEARGDHCESCGRALEPTELLEPHCLTCGNT 178

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                   YFF+LS +Q++L  Y  ++    LP   RN   +++K GL+D  ++R    W
Sbjct: 179 PVIRDSTQYFFKLSHFQNQLEEYITTNE--YLPPNVRNYAQNWLKEGLEDWIMTRD-MKW 235

Query: 217 GIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-LHVIGKDILRFHA 272
           GI +P +     ++YVW +A   Y+++        G   + +W    +H IGKDI+  H+
Sbjct: 236 GIPVPLEGAKGKVIYVWGEAFIGYISSAAAWSRRTGIPWEDYWDGHVVHFIGKDIIYHHS 295

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L+  +  LP  +F+  F+  +G K+S S   V+   + +++   D LR++L   
Sbjct: 296 LFWPAMLMGHDCKLPDDIFAGEFLSLEGRKMSTSKNWVVWVSDFVKDFESDLLRFYLTIS 355

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +  D   +RVN +LA+ IGN + R+ +   K +DG +P     +E D    +
Sbjct: 356 APLNKDTDFSWDDFGRRVNDELADIIGNFLHRTFTFTHKFFDGKVPEYANPSEEDLEFEA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +  ++ E + +      L +++      ++YF+ Q+PW+  K NP +AS  LY++ 
Sbjct: 416 EIKELPAKVGELISSMKFREGLVEILKTAKSANKYFNDQEPWKAVKENPQKASNCLYLSN 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  + LAILL+ ++P  A+ I DI+ ++ EN
Sbjct: 476 QFCKSLAILLKPYIPNKADAICDIINISKEN 506


>gi|154279182|ref|XP_001540404.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
 gi|150412347|gb|EDN07734.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
          Length = 324

 Score =  220 bits (560), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 117/276 (42%), Positives = 162/276 (58%), Gaps = 16/276 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 56  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 115

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN + F+++A   ++ YD FIRTT+  H +        ++ +G IY 
Sbjct: 116 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEA-----DMLNHRGYIYT 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V    D                VQW  EE Y FRLS +Q+ 
Sbjct: 171 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSTFQEP 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P FI P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 231 LLEHFRKNPNFITPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           AL NY+T  GY   P G+++  WPAD+HV+GKDILR
Sbjct: 291 ALVNYITYAGY-PFPPGAQS-IWPADVHVVGKDILR 324


>gi|240103568|ref|YP_002959877.1| methionyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911122|gb|ACS34013.1| Methionyl-tRNA synthetase (metG) [Thermococcus gammatolerans EJ3]
          Length = 739

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 253/525 (48%), Gaps = 53/525 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G +VLF  GTDEHG  I   A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEGR 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   + +   +   IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q                      N   NP+ + + 
Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGRPLTPEILINPRCNICGNPITFKDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ ++  ++++L  + ES P        +N V+ ++  GL++ +++R   DWGI +P 
Sbjct: 186 AHYYIKMQDFEERLKKWIESRP---WKPNVKNTVLGWINEGLEERAITR-DLDWGIPVPL 241

Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW------PADLHVIGKDILR 269
           D +     ++YVW +A   Y++ T       G +    KFW         +H IGKD + 
Sbjct: 242 DDEDMRGKVLYVWFEAPIGYISITIEALKRAGKEKEWKKFWLNLEGETRVIHFIGKDNIP 301

Query: 270 FHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           FHAI+WPAFL++          A+  LP  + ++ ++  +G+K S S    I   E ++ 
Sbjct: 302 FHAIFWPAFLMAYGKYKDEEVEADWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEFLDA 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG++P 
Sbjct: 362 FPADYLRYYLTAIMPETRDSDFSFADFKVKINEELVNNLGNFVHRALTFVNRYFDGIVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E D+       R  +E+ E +       AL +V+ L    +RYFD Q+PW+  KT
Sbjct: 422 RGELNELDKQAFEEIERAFEEVGELISQYRFKDALRRVMELAIFGNRYFDHQRPWKTAKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +  R +T + V++++++ L ILL+ F+P  + KI+ +L + +  R
Sbjct: 482 DRKRTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEELKR 526


>gi|315927239|gb|EFV06585.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 249

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/252 (43%), Positives = 165/252 (65%), Gaps = 6/252 (2%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++NE+I+FV++GLKDLS++R +FDWGIK+P   +D ++I+YVW+DAL  Y+++  +
Sbjct: 1   MPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 60

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +   G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 61  QN--KGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 118

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 119 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 178

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 179 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 237

Query: 425 DRYFDAQKPWEL 436
           +      +PW L
Sbjct: 238 NLAISKYEPWSL 249


>gi|302501698|ref|XP_003012841.1| hypothetical protein ARB_01092 [Arthroderma benhamiae CBS 112371]
 gi|291176401|gb|EFE32201.1| hypothetical protein ARB_01092 [Arthroderma benhamiae CBS 112371]
          Length = 418

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 186/360 (51%), Gaps = 34/360 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214
           V++ +E  Y F+LSA+QD+LL +Y  +P+FI P    + ++  V SGL+DLS+SR     
Sbjct: 19  VKFSQETNYHFKLSAFQDRLLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRL 78

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI------- 267
            WGI +P D    +YVW+DAL NY+T  GY   P   +   WPAD+HV+GKDI       
Sbjct: 79  SWGIPVPGDTTQTIYVWLDALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRCAIRM 138

Query: 268 ------------LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                        RFH IYWPAFL++ +LPLP+ + +H        K+SKS GNV++P+ 
Sbjct: 139 KAFNTHRYQLIPFRFHCIYWPAFLMALDLPLPRTILTHAHWTMNHSKMSKSTGNVVNPMF 198

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS----MILK 371
            +   GVD +R++L        D  YD   + +     L  G+GNL SR +      + +
Sbjct: 199 AMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNVLQGGLGNLCSRVMRGKGWNVRE 258

Query: 372 DYDGMIPTPGAFTESDESI---LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               M    G+    D S    +    +V   +   M      RAL +++ ++ + +RY 
Sbjct: 259 SVVKMTNGQGSRRAKDPSEIEHMEFLEKVPGLVSNQMDELNPRRALEEIVKIIDQTNRYV 318

Query: 429 DAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +  PW L K   T+P   D+   V+Y   E +R   ILLQ F+P+ A K+ D+L V ++
Sbjct: 319 QSTGPWNLAKEAGTDPTAHDQLVGVIYNATESLRIAGILLQPFMPEKAKKLLDMLGVEED 378


>gi|74186218|dbj|BAE42903.1| unnamed protein product [Mus musculus]
          Length = 394

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 189/355 (53%), Gaps = 24/355 (6%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
           +PV W +EE Y F+LS +++ L  +  ++P+ I P      V+ +++  L DLS+SR++ 
Sbjct: 2   HPVSWTKEENYIFKLSQFREPLQRWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSS 61

Query: 214 -FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
              WGI +P D    +YVW+DAL NYLT  GY   PD     +WPA  H+IGKDIL+FHA
Sbjct: 62  HLHWGIPVPGDDSQTIYVWLDALVNYLTVVGY---PDADFKSWWPATSHIIGKDILKFHA 118

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWPA LL A L  P +++ H      G+K+SKSLGNV+DP   ++   VD  RYFL+R+
Sbjct: 119 IYWPALLLGAGLRPPHRIYVHSHWTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQ 178

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------------- 379
                D  Y  + + K ++++LA+ +G L++R  +  +    G  P+             
Sbjct: 179 GVPNWDCDYYDEKVVKLLDSELADALGGLLNRCTAYRINP-SGTYPSFCAACFPSEPGLT 237

Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELK 437
            P    ++++  L      L ++     N   I++AL  V S V + + +     PW+L 
Sbjct: 238 GPSVRVQAEDYALVTAVATLPKLVAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLN 297

Query: 438 KTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +P+ A    TVL+V +E +R    LLQ   P LA+K+   L V+   R    L
Sbjct: 298 WESPEDAPWLGTVLHVALECLRVFGTLLQPVTPNLADKLLSRLGVSTTERGLGEL 352


>gi|313235831|emb|CBY19815.1| unnamed protein product [Oikopleura dioica]
          Length = 479

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 202/389 (51%), Gaps = 50/389 (12%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++  I Y  + PHIGH +  +I D   R+++++ +   F+ GTDEHGQKI ++A   G 
Sbjct: 43  FVTCPIYYATSSPHIGHIHSSVIGDFYHRWNKINDVASKFSLGTDEHGQKIIRSAAQQGY 102

Query: 68  T-TKVFVDQNSRNFRDMADVLDIS---YDD--FIRTTEKRHHDTCRILWKKISDKGDI-- 119
              ++ V+  S  +R       IS    DD  F+RTT   HH   + LW ++  KG I  
Sbjct: 103 DHPEILVNNISDLYRRTFKKFSISVASLDDAIFMRTTTSEHHQAAQKLWTRLRSKGFIKM 162

Query: 120 --YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+GC    + L                           +W+ EE Y F    + +++ 
Sbjct: 163 QNYEGCAVNGHKL---------------------------EWVSEENYIFEFEPFLNEIE 195

Query: 178 SYYESHPEFILPIERR---NEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232
           S+     + + P   +   +E+    K+G   LS+SR      WG+ +P+D  + MYVW 
Sbjct: 196 SWIV---KAVAPDAAKILIDELKDRRKTGNMSLSISRPRNRVPWGVAVPNDANHTMYVWF 252

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           +AL NYLT  GY  + D +  +FWP  L VIG DI RFH I+WPA LL+A LPLPKKVF 
Sbjct: 253 EALINYLTAAGYGKH-DNNALEFWPPQLQVIGIDIARFHCIFWPAMLLAAELPLPKKVFV 311

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRV 350
           HG     G K+SKSL N + P E++E VG   DA+R+F ++        F D + L+ + 
Sbjct: 312 HGHWTRDGMKMSKSLDNFVTPKELLELVGNQSDAVRWFCLKHATLKNVDFQD-ELLRIQS 370

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +ADLAN I NL+SR+ S  L +  G  PT
Sbjct: 371 DADLANKIANLLSRTTSKNL-NPSGAYPT 398


>gi|225562391|gb|EEH10670.1| methionine-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 355

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 165/302 (54%), Gaps = 37/302 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 56  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 115

Query: 62  AQNAGVTTKVFVDQNSRNF--------------------------RDMADVLDISYDDFI 95
           A   GVT +   DQN + F                          +++A   ++ YD FI
Sbjct: 116 AAALGVTPQALCDQNCKTFQVCVIRRSGDGLLWQLGRADAQDLDLKNLARKGNVGYDHFI 175

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--- 152
           RTT+  H +  R  W  ++ +G IY   + GWYS+ DEA+Y    V    D         
Sbjct: 176 RTTDAEHKEAVRYFWDMLNHRGYIYTSKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIIT 235

Query: 153 ---QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  VQW  EE Y FRLSA+Q+ LL ++  +P+FI P    + ++S V SGL+DLS+
Sbjct: 236 SIETGKEVQWASEENYHFRLSAFQEPLLEHFRKNPDFITPRNYMDGIVSAVTSGLQDLSI 295

Query: 210 SRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           SR      WGI +P D   ++YVW+DAL NY+T  GY   P G+++  WPAD+ V+GKDI
Sbjct: 296 SRPASRLKWGIPVPYDESQVIYVWLDALVNYITYAGY-PFPPGAQS-IWPADVQVVGKDI 353

Query: 268 LR 269
           LR
Sbjct: 354 LR 355


>gi|256374791|ref|YP_003098451.1| methionyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919094|gb|ACU34605.1| methionyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 596

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 246/525 (46%), Gaps = 65/525 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I+  A+  
Sbjct: 5   VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMSGHRVLMVSGTDEHGTPISVQAEKE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +   D+ +R   +    L +SYD F RTT   H++  + L+  +   G +      
Sbjct: 65  GLSVRALADKYNRVIAEDLQGLGLSYDLFTRTTTGNHYNVTQELFLAMWRNGYVVAKTGK 124

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QWM 160
           G  S        D  +        Y GA G   ++   Q +PV              +++
Sbjct: 125 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDSCGNQLDPVDLKNPKSRINGETPKFV 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E  +  L  + D L ++ ++  E+      R  V+ F ++ + DL     T   DWGI
Sbjct: 185 ETEHLYLDLPQFIDSLGTWLQTRSEW------RPNVLKFSQNLIGDLRPRAITRDLDWGI 238

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADLHV---IGKD 266
            IP     D      YVW DA+  Y + +        NPD  + +FW  D      +GKD
Sbjct: 239 PIPLDGWRDQSMKRFYVWFDAVIGYFSASVEWARRSGNPDAWR-EFWTGDAQAYYFMGKD 297

Query: 267 ILRFHAIYWPAFLLSA--------------NLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH++ WP+ LL                 L LP +V S  F+   G K S S GNVI 
Sbjct: 298 NIVFHSLIWPSLLLGNNGEGAGGGEPGGFGKLNLPTEVVSSEFLTMSGSKFSTSRGNVIY 357

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + + G DALRYF+       +D  +  +   +R N +LAN  GNLV+RS+SM  K+
Sbjct: 358 VTDFLRDFGPDALRYFIAAAGPENQDTDFTWEEFVRRTNFELANEWGNLVNRSISMAHKN 417

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
             G +PTP A T +D  +L    R    + EN++      A ++ + +V   +RY   Q+
Sbjct: 418 V-GAVPTPTAPTAADHELLETSRRAFGVVGENLRRSRFKAASSEAMRVVGAANRYLSDQE 476

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW+LK  +P R  TVL+  ++V++    LL  F+P  A K+ ++L
Sbjct: 477 PWKLKD-DPARRDTVLHTALQVVQDANTLLTPFLPHSAQKVHELL 520


>gi|156086356|ref|XP_001610587.1| methionyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797840|gb|EDO07019.1| methionyl-tRNA synthetase, putative [Babesia bovis]
          Length = 522

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 232/435 (53%), Gaps = 31/435 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N   H+GHAY ++ AD + ++++L G  +L  +GTDEHG KIA AAQ  G  
Sbjct: 38  LTTPLFYLNDPLHVGHAYTLVSADAIKKYYKLLGRTILILSGTDEHGTKIANAAQTNGEK 97

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            ++F+++  +++ D+ +  D+S D  + T+ ++H +  +  +  + +KGDIY+G + G++
Sbjct: 98  PEIFIERMRQHYTDVYEAYDVSVDINVHTSLEQHKEKVKKTFGYLLEKGDIYEGVHKGYF 157

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S  +E YY + ++  G     ++     V  + E+ YFFRLS Y+D LL   +    FI+
Sbjct: 158 SPTEETYYTEFQLINGKSPLGFD-----VYPVAEKAYFFRLSKYKDALLQLIKRE-GFIV 211

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PDDPQYIMYVWIDALTNYLTTTGYLD 246
           P ER+NE I  +   L D++++R    WG+ +  P    + +YVW+DAL  Y        
Sbjct: 212 PKERQNEAIGLLSGNLPDIAITRSNTTWGVPVGQPGFEGHTIYVWLDALLGYCI------ 265

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             D ++       L + GKDILRF  + WPA L++  +P+P+++  HG+++   EKISKS
Sbjct: 266 --DRNQYGVGTETLMLFGKDILRFMTLVWPALLMALEMPMPQQMVCHGWLMSNDEKISKS 323

Query: 307 LGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI----GNL 361
            G   D +  +  +G  D  R+ L+   A G+D  Y+     KRV  D+ N +     NL
Sbjct: 324 KG---DKVFALPPIGTSDVSRFVLMNLGAFGEDIQYN----PKRVE-DMKNIVRDKYANL 375

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   MI  D  G++      TE     +   ++  + ++  M++  I + + +V  + 
Sbjct: 376 TYRLTGMI--DKRGILEINHRDTECINHFVEGITKKWECLQNIMEHHRIDKYVNEVTEVA 433

Query: 422 SEVDRYFDAQKPWEL 436
             ++ Y   ++ W+L
Sbjct: 434 GCINSYITHKQVWDL 448


>gi|254172601|ref|ZP_04879276.1| methionyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033530|gb|EEB74357.1| methionyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 739

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 252/528 (47%), Gaps = 59/528 (11%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G +VLF  GTDEHG  I   A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEGR 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   + +   +   IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q                      N   NP+ + + 
Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGRPLTPEILINPRCNICGNPITFKDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             Y+ ++  ++++L  + ES    P        +N V+ ++  GL++ +++R   DWGI 
Sbjct: 186 AHYYIKMQDFEERLKKWVESQHWKPNV------KNTVLGWINEGLEERAITR-DLDWGIP 238

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T       G +    KFW          H IGKD
Sbjct: 239 VPLDDEDVKGKVLYVWFEAPIGYISITIEALKRAGKEKEWKKFWLNLDGETKVTHFIGKD 298

Query: 267 ILRFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL++          A   LP  + ++ ++  +G+K S S    I   E 
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG+
Sbjct: 359 LDAFPADYLRYYLTAIMPETRDSDFSFADFKVKINEELVNNLGNFVHRALTFVNRYFDGI 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D+       R  +E+ E +       AL +V+ L    +RYFD Q+PW+ 
Sbjct: 419 VPERGELNELDKQAFEEIERAFEEVGELISQYRFKDALRRVMELAIFGNRYFDHQRPWKT 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            KT+ +R +T + V++++++ L ILL+ F+P  + KI+ +L + +  R
Sbjct: 479 AKTDRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEELKR 526


>gi|289432281|ref|YP_003462154.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946001|gb|ADC73698.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 553

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 244/514 (47%), Gaps = 40/514 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  + F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158
               +      +  D  V        Y+GA G       +  NA            NP +
Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L+ + E+   +   +   N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADL---HVIGKDILR 269
            +P  P Y    +YVW +A+T YL+ +       G      K+W  D    + IGKD + 
Sbjct: 240 PLPL-PGYEGKRLYVWFEAVTGYLSASKEWAASKGQPNAWQKYWGVDTKSYYFIGKDNIP 298

Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH I WPA L+    L LP  V S+ ++  + +K SKS  N I   +V+   GVD LRY 
Sbjct: 299 FHTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYL 358

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L   +    D  +      +R N +L    GNL  R ++M+ ++YD  +P  G   E   
Sbjct: 359 LSANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSL 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +++   + +L E  + + N     A+   ++L  E +RY D + PW+  K +   A+  L
Sbjct: 419 TLIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSL 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YV +  +  L +    F+P+ + ++   L    E
Sbjct: 479 YVAMVALSGLRVAFYPFLPESSGRLSTYLGFGSE 512


>gi|300858095|ref|YP_003783078.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685549|gb|ADK28471.1| Methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302330378|gb|ADL20572.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 610

 Score =  213 bits (541), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 256/530 (48%), Gaps = 67/530 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A  
Sbjct: 4   RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGADVLMVSGTDEHGTPLLVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+ +R   +    L +SYD F RTT + H+   + L+K + + G + K   
Sbjct: 64  EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYSVVQELFKGLYENGYMIKETT 123

Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159
            G  S        + Y        GADG    Q  N  +        NPV        Q+
Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGGTPQF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A  D L  + +   ++      R  V+ F  + L+DL   ++SR   DW
Sbjct: 184 IETEHFLLDLPALADALADWLKERQDW------RPNVLKFSLNLLEDLRPRAMSRD-IDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GY-LDNPDGSKAKFW--PA--DLHVI 263
           GI IP     D+    +YVW DA+  YL+ +    Y +  PD  K ++W  PA    + +
Sbjct: 237 GIPIPVEGWEDNGAKKLYVWFDAVVGYLSASIEWAYRIGKPDAWK-EWWTDPAASSYYFM 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V S  F+   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYQGKGARAGKLHTFGELNLPTEVVSSEFLTMSGSKFSSSKGI 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +PTPG  TESD+ IL + +   + + + + +    + +   + +V E + Y  
Sbjct: 416 YKNF-GEVPTPGELTESDQRILKLSAEAFEVVGDALAHSRFKQGITHAMHVVGEANAYIA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+    +LL  ++P ++ ++ + L
Sbjct: 475 EQEPWKLAKDETQRERLATVLWTALQVVSDCNVLLTPYLPHISQQVHETL 524


>gi|302205819|gb|ADL10161.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276054|gb|ADO25953.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 610

 Score =  213 bits (541), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 256/530 (48%), Gaps = 67/530 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A  
Sbjct: 4   RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGADVLMVSGTDEHGTPLLVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+ +R   +    L +SYD F RTT + H+   + L+K + + G + K   
Sbjct: 64  EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYSVVQELFKGLYENGYMIKETT 123

Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159
            G  S        + Y        GADG    Q  N  +        NPV        Q+
Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPQF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A  D L  + +   ++      R  V+ F  + L+DL   ++SR   DW
Sbjct: 184 IETEHFLLDLPALADALADWLKERQDW------RPNVLKFSLNLLEDLRPRAMSRD-IDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GY-LDNPDGSKAKFW--PA--DLHVI 263
           GI IP     D+    +YVW DA+  YL+ +    Y +  PD  K ++W  PA    + +
Sbjct: 237 GIPIPVEGWEDNGAKKLYVWFDAVVGYLSASIEWAYRIGKPDAWK-EWWTDPAASSYYFM 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V S  F+   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYQGKGARAGKLHTFGELNLPTEVVSSEFLTMSGSKFSSSKGI 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +PTPG  TESD+ IL + +   + + + + +    + +   + +V E + Y  
Sbjct: 416 YKNF-GEVPTPGELTESDQRILKLSAEAFEVVGDALAHSRFKQGITHAMHVVGEANAYIA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+    +LL  ++P ++ ++ + L
Sbjct: 475 EQEPWKLAKDETQRERLATVLWTALQVVSDCNVLLTPYLPHISQQVHETL 524


>gi|304391147|ref|ZP_07373099.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326030|gb|EFL93276.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 605

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/525 (30%), Positives = 253/525 (48%), Gaps = 59/525 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I  AA+ 
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T +   ++N+R   +    L +SYD F RTT   H+DT R ++K + D G +     
Sbjct: 63  AGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYDTVRAMFKVVRDNGYMKVQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  +         +GA G   +A  N +                 ++
Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + YF  L A    L  + +   +       R  VI F K+ LKD+     T   DWG
Sbjct: 183 VETDHYFLDLPALARALNEWLDDREKNG---NWRPNVIKFSKNFLKDIKPRAMTRDIDWG 239

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADL--HVIGKDI 267
           I IP  +D    +YVW DA+  YL+ +       G   + W      P  L  + +GKD 
Sbjct: 240 IPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPESLSYYFMGKDN 299

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WPA +L  N              L LP +V S  F+  +G+K + S G VI  
Sbjct: 300 IVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYV 359

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDALRYF+       +D  +      +R N++L    GNLV+R+ SMI K +
Sbjct: 360 RDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKF 419

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G IP  G FT  D+++L   +   + + + +++     ALA+++ LV E +RY    +P
Sbjct: 420 -GEIPPAGDFTAEDQALLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEP 478

Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++LK ++  DR  T+L+V  +V+  L +++  F+P  +N I  +L
Sbjct: 479 FKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVL 523


>gi|315656075|ref|ZP_07908966.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315493077|gb|EFU82677.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 605

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/525 (30%), Positives = 253/525 (48%), Gaps = 59/525 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I  AA+ 
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T +   ++N+R   +    L +SYD F RTT   H+DT R ++K + D G +     
Sbjct: 63  AGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYDTVRAMFKVVRDNGYMKVQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  +         +GA G   +A  N +                 ++
Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + YF  L A    L  + +   +       R  VI F K+ LKD+     T   DWG
Sbjct: 183 VETDHYFLDLPALARALNEWLDDREKNG---NWRPNVIKFSKNFLKDIKPRAMTRDIDWG 239

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADL--HVIGKDI 267
           I IP  +D    +YVW DA+  YL+ +       G   + W      P  L  + +GKD 
Sbjct: 240 IPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPESLSYYFMGKDN 299

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WPA +L  N              L LP +V S  F+  +G+K + S G VI  
Sbjct: 300 IVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYV 359

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDALRYF+       +D  +      +R N++L    GNLV+R+ SMI K +
Sbjct: 360 RDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKF 419

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G IP  G FT  D+++L   +   + + + +++     ALA+++ LV E +RY    +P
Sbjct: 420 -GEIPPAGDFTAEDQALLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEP 478

Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++LK ++  DR  T+L+V  +V+  L +++  F+P  +N I  +L
Sbjct: 479 FKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVL 523


>gi|20094286|ref|NP_614133.1| methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|25009365|sp|Q8TX28|SYM_METKA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19887329|gb|AAM02063.1| Methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 668

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 242/512 (47%), Gaps = 43/512 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ ++TA+AY N   HIGH     + ADV  RF ++ G+D +   GTD HG  IA  A+ 
Sbjct: 3   KVLVTTALAYTNGPLHIGHVRSTYLPADVYTRFLKMRGIDAIHIGGTDNHGVPIALQAEL 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDF---IRTTEKRHHDTCRILWKKISDKGDIYK 121
            G   +  V++     ++  + L+I +D+F    R     H D  +  +K++ + G I +
Sbjct: 63  EGKDPEEIVEKYHEMIKEDLERLNIHFDEFSCTCREFNPDHVDMTQWFFKRLYEAGYIEE 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----YKGADG------QYYNAQHNPVQWMEEEG------ 164
                 Y    E    D  V     Y GA+G      +       PVQ  E         
Sbjct: 123 REVEQLYCPECERPLPDRYVEGVCPYCGAEGARGDHCEACGRYLEPVQLEEPRCVICGSK 182

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                    FF+LS +++ L  + ES+    LP   RN  I +V+ GLKD  + R   DW
Sbjct: 183 PEVRRTMHLFFKLSEFEEDLKKWLESNDN--LPKNVRNYAIQWVREGLKDWDIVRD-LDW 239

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDILR 269
           G+ +P +     + YVW DA   Y+T T  Y D        +W ++    +H IGKDI+ 
Sbjct: 240 GVPVPLEGYEDKVFYVWFDAPIGYVTFTKQYCDRVGQDWKDYWFSEDTKIVHFIGKDIIV 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            HA++WPA L+     LP  + +  ++  +GEK+S S G V+   +  +    D LRY+L
Sbjct: 300 HHALFWPAMLMGVGATLPYTIVAGEYLTLEGEKMSTSRGWVVWVKDFTKLFPADLLRYYL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  +     + RVN +L   +GN V R++S I +  DG +P      E+D+ 
Sbjct: 360 IVVSPLTRDADFSWGDFRDRVNNELVANLGNFVYRTLSFIYRFLDGNVPE----AETDQE 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           I+       Q + E+++      AL +V+ L    + YF   +PW+LK  +P+R + VL 
Sbjct: 416 IVDKIKETHQRVTEHLEKFRFREALTEVLRLSKFGNEYFQEHEPWKLKDEDPERCAEVLR 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +++ LA++L  F+P  A KI+  L   D
Sbjct: 476 GCARIVKALAVMLAPFLPDSAEKIWQSLGYED 507


>gi|15217129|gb|AAK92522.1|AF401043_1 methyonyl-tRNA synthetase [Lactobacillus sakei]
          Length = 395

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 176/295 (59%), Gaps = 4/295 (1%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +  +P++++YVW+DAL+NY+T  GY  + D    K+WPAD+H++GK+I+RFHAIYWP FL
Sbjct: 1   VTGNPKHVVYVWLDALSNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFL 60

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++  LPLPK++F HG++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG
Sbjct: 61  MALGLPLPKQIFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRAIPFGNDG 120

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVL 398
            +  +    R+N DLAN +GNL++R+V+MI K  DG +P+  A  T  D  + +  ++ +
Sbjct: 121 VFTPEDFVSRINYDLANDLGNLLNRTVAMINKYDDGHVPSYQADVTAFDADLQATATQTI 180

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIR 456
            +    M       AL  +  L+S  ++Y D  +PW L K +  +A   +VL    E +R
Sbjct: 181 AQYSTLMDQLKFSDALDTIWQLISRANKYIDETEPWVLAKDDSRKAELDSVLAHLAESLR 240

Query: 457 QLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +A+LLQ  +     ++F  L +  D+    + +  R      +     PIFPR 
Sbjct: 241 IVALLLQPVMTHAPREMFAQLGLDFDQEAQREMVYGRFPSDIKVIAKGTPIFPRL 295


>gi|72160793|ref|YP_288450.1| methionyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123760895|sp|Q47SZ0|SYM_THEFY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71914525|gb|AAZ54427.1| methionyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 606

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 245/529 (46%), Gaps = 64/529 (12%)

Query: 6   KLYISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           K +I TA+A+P  N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  I   A
Sbjct: 4   KRHILTAVAWPYANGPRHIGHVSGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPIQVLA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV+ +   D+ +R   +    L +SYD F RTT   H+   + L+  +   G I+  
Sbjct: 64  DQEGVSARELADRYNRIIAEDLVALGLSYDLFTRTTTANHYAVVQELFTGLYRNGYIFSK 123

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPV-------------- 157
              G  S        D  V        Y GA G   +    Q +P               
Sbjct: 124 TTKGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGKQLDPTDLINPRSKINGETP 183

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++++ E +   L A+ ++L  + +S        E R  V+ F  + L +L     T   D
Sbjct: 184 EFVDTEHFMLDLPAFAEQLSEWLKSKGG-----EWRPNVLKFSLNLLDELQPRAITRDLD 238

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WG+ IP     D P   +YVW DA+  YL+ +        +P+  + K+W        + 
Sbjct: 239 WGVPIPLEGWRDQPNKRLYVWFDAVIGYLSASIEWAKRTGDPEAWR-KWWQNSDAESFYF 297

Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FH+  WPA LL                 L LP +V S  F+  +G K S S  
Sbjct: 298 MGKDNIVFHSEIWPAMLLGYSGKGSKGGEPGSLGALNLPTEVVSSEFLTMEGRKFSSSRR 357

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + +E    DALRY+++      +D  +      +R N +L    GNLV+RS+SM
Sbjct: 358 VVIYVRDFLERYDADALRYYIIAAGPETQDTDFTWAEFVRRNNDELVATWGNLVNRSISM 417

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K+  G IP  G  T++D ++L         + E +       AL + + +V+E ++YF
Sbjct: 418 AAKNI-GHIPEAGELTDADRAVLDASKAAFATVGERLNRAQFKAALQEAMRVVAEANKYF 476

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             Q PW+LKKT+P R  TVL+V ++++     LL  F+P  +NK++++L
Sbjct: 477 SEQAPWKLKKTDPKRMETVLHVALQLVSDAKTLLTPFLPASSNKVYEML 525


>gi|73748231|ref|YP_307470.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123732537|sp|Q3ZZB2|SYM_DEHSC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|73659947|emb|CAI82554.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 553

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 243/514 (47%), Gaps = 40/514 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  + F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158
               +      +  D  V        Y+GA G       +  NA            NP +
Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L+ + E+   +   +   N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADL---HVIGKDILR 269
            +P  P Y    +YVW +A+  YL+ +       G      K+W  D    + IGKD + 
Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASKEWAASKGQPNAWQKYWGGDTKSYYFIGKDNIP 298

Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH I WPA L+    L LP  V S+ ++  + +K SKS  N I   +V+   GVD LRY 
Sbjct: 299 FHTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYL 358

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L   +    D  +      +R N +L    GNL  R ++M+ ++YD  +P  G   E   
Sbjct: 359 LSANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSL 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +++   + +L E  + + N     A+   ++L  E +RY D + PW+  K +   A+  L
Sbjct: 419 TLIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSL 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YV +  +  L +    F+P+ + ++   L    E
Sbjct: 479 YVAMVALSGLRVAFYPFLPESSGRLSTYLGFGSE 512


>gi|147669013|ref|YP_001213831.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|187647716|sp|A5FS74|SYM_DEHSB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146269961|gb|ABQ16953.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 553

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 243/514 (47%), Gaps = 40/514 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  + F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158
               +      +  D  V        Y+GA G       +  NA            NP +
Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L+ + E+   +   +   N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADL---HVIGKDILR 269
            +P  P Y    +YVW +A+  YL+ +       G      K+W  D    + IGKD + 
Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASKEWAASKGQPNAWQKYWGVDTKSYYFIGKDNIP 298

Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH I WPA L+    L LP  V S+ ++  + +K SKS  N I   +V+   GVD LRY 
Sbjct: 299 FHTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYL 358

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L   +    D  +      +R N +L    GNL  R ++M+ ++YD  +P  G   E   
Sbjct: 359 LSANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSL 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +++   + +L E  + + N     A+   ++L  E +RY D + PW+  K +   A+  L
Sbjct: 419 TLIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSL 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YV +  +  L +    F+P+ + ++   L    E
Sbjct: 479 YVAMVALSGLRVAFYPFLPESSGRLSTYLGFGSE 512


>gi|315230502|ref|YP_004070938.1| methionyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183530|gb|ADT83715.1| methionyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 731

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 255/531 (48%), Gaps = 62/531 (11%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G DV++  GTDEHG  I   A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVIYICGTDEHGTPITFRALKEGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD    + +   +   IS+D F RT    H+   +  + +    G + K      
Sbjct: 66  SPREIVDYYYEHIKTTFERAKISFDYFGRTELPVHYKVSQDFFLRALKNGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q                      N   NP+ + + 
Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAEEQRGDQCEVCGRPLTPEILINPRCNICGNPITFKDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
             Y+ ++  +Q+KL  + ES+  +   +  RN V+ ++K GL++ +++R   +WGI +P 
Sbjct: 186 AHYYIKMQDFQEKLRKWIESNEHWKPNV--RNTVLGWIKEGLEERAITR-DLNWGIPVPL 242

Query: 222 DDPQY---IMYVWIDALTNYLTTT---------------GYLDNPDGSKAKFWPADLHVI 263
           +D +    ++YVW +A   Y++ T                +L N DG + +     +H I
Sbjct: 243 EDKEMSGKVLYVWFEAPIGYISITIEYFKRIGKEEEWKKYWLANYDGEETRI----IHFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN----------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           GKD + FHAI+WPAFL+S              LP  + ++ ++  +G+K S S    I  
Sbjct: 299 GKDNIPFHAIFWPAFLMSYGKFEDKNGEFKWLLPYDIPANEYLNLEGKKFSTSRNWAIWV 358

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E ++E   D LRY+L   +   +D  ++    K ++N +L N +GN V R+++ + + +
Sbjct: 359 HEFLDEFPADYLRYYLTAIMPETRDSDFNFKDFKAKINEELVNILGNFVHRALTFVNRYF 418

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           DG +P  G   E D        +  +E+ E +       AL + ++L +  +RYFD Q+P
Sbjct: 419 DGKVPERGELDELDRQAFEEIEKAFEEVGELIAKYRFKDALKRAMALATFGNRYFDYQQP 478

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           W+  KT+  R +T + V++++++ L I+++ F+P    KI+ +L + +  R
Sbjct: 479 WKTAKTDKLRTATTVNVSLQIVKALGIIIEPFLPDAGEKIWHLLNLEELKR 529


>gi|14521189|ref|NP_126664.1| methionyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14548275|sp|Q9V011|SYM_PYRAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49258778|pdb|1RQG|A Chain A, Methionyl-Trna Synthetase From Pyrococcus Abyssi
 gi|5458407|emb|CAB49895.1| metS methionyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 722

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 250/519 (48%), Gaps = 55/519 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGR 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+     +       IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q  +                        P+ + + 
Sbjct: 126 YCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISFRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ ++  + ++L  + E  P        +N V+S+++ GL++ +++R   +WGI +P 
Sbjct: 186 AHYYIKMQDFAERLKRWIEKQP---WKPNVKNMVLSWIEEGLEERAITR-DLNWGIPVPL 241

Query: 223 DPQ----YIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDIL 268
           D +     ++YVW +A   Y++ T      +  P+  K K+W         +H IGKD +
Sbjct: 242 DEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWK-KYWLNIDGQTRVIHFIGKDNI 300

Query: 269 RFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            FHAI+WPAFL++          A   LP  + ++ ++  +G+K S S    I   E ++
Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLD 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY+L   +   +D  +     K R+N +L N +GN V R+++ + + +DG++P
Sbjct: 361 VFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGVVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G   E D   L    +  +E+ E + N     AL +V+SL S  +RYFD ++PW+  K
Sbjct: 421 ERGELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFDHKQPWKTAK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  R  T + +++++++ L ILL+ F+P  + KI+ +L
Sbjct: 481 EDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLL 519


>gi|14590837|ref|NP_142909.1| methionyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|7388278|sp|O58721|SYM_PYRHO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3257407|dbj|BAA30090.1| 723aa long hypothetical methionyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 723

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 250/519 (48%), Gaps = 55/519 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGR 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   + +       IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQQFFLKAYENGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162
           Y   D+ +  D  V     + GA+ Q  +                        P+ + E 
Sbjct: 126 YCEHDKMFLPDRFVIGTCPFCGAENQRGDQCEVCGRPLTPEILINPRCALCGRPISFRES 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ ++  + +KL  + E+ P        +N V+ +++ GL++ +++R   +WGI +P 
Sbjct: 186 AHYYIKMQDFAEKLKRWIENQP---WKPNVKNMVLKWIEEGLEERAITR-DLNWGIPVPL 241

Query: 223 DPQ----YIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDIL 268
           D +     ++YVW +A   Y++ T      L  P+  K K+W         +H IGKD +
Sbjct: 242 DEEDMKNKVLYVWFEAPIGYISITMEYFKRLGKPNEWK-KYWLNIDSETRVIHFIGKDNI 300

Query: 269 RFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            FHAI+WPAFL++          A   LP  + ++ ++  +G+K S S    I   E ++
Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLD 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY+L   +   +D  +     K R+N +L N +GN V R+++ + + +DG++P
Sbjct: 361 VFPADYLRYYLTTIMPETRDSDFSFAEFKTRINEELVNNLGNFVHRAMTFVNRYFDGIVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G   E D   L    +  +E+ E + N     AL +V+ L S  ++YFD ++PW+  K
Sbjct: 421 ERGELDELDRQALEEIEKAFEEVGELIMNYRFKDALKRVMELASFGNKYFDHKQPWKTAK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  R  T + +++++++ L ILL+ F+P  + KI+ +L
Sbjct: 481 EDRARTGTTVNISLQIVKALGILLEPFLPDASEKIWHLL 519


>gi|134097405|ref|YP_001103066.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|187647765|sp|A4F7W6|SYM_SACEN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|133910028|emb|CAM00140.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 593

 Score =  210 bits (534), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 249/525 (47%), Gaps = 68/525 (12%)

Query: 11  TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I+  A   G+
Sbjct: 2   TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPISVQADKEGL 61

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           +T+   D+ +R   +    L +SYD F RTT   H++  + ++  +   G I     +G 
Sbjct: 62  STRELADKYNRVITEDLQGLGLSYDLFTRTTTGNHYEVVQQIFLALHRNGYIIPKTTTGA 121

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQ--------WMEE 162
            S        D  +        Y GA G Q  N  +        NPV         ++E 
Sbjct: 122 ISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPAELINPVSRINGEKPDFVET 181

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWGIK 219
           E  F  LSA+ + L  +  +   +      R+ V+ F ++ ++D+   ++SR   DWG+ 
Sbjct: 182 EHLFLDLSAFTESLGKWLSTRTGW------RSNVLKFTQNLVEDMRPRAISRD-LDWGVP 234

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKD 266
           IP     D     +YVW DA+  Y + +        +PD  K +FW        + +GKD
Sbjct: 235 IPLDGWRDQSMKRLYVWFDAVIGYFSASVEWARRTGDPDAWK-QFWTDPSAQGYYFMGKD 293

Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FHA  WPA L+  N              L LP ++ S  F+   G K S S G VI 
Sbjct: 294 NITFHAQIWPALLMGHNGQGDKGGEVGPYGQLNLPDEIVSSEFLTMSGSKFSTSRGTVIY 353

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G D LRYF+       +D  +  D   +RVN +LAN  GNLV+RSVSM  K+
Sbjct: 354 VRDFLREFGPDTLRYFISVAGPENQDTDFTWDEFVRRVNFELANEWGNLVNRSVSMAAKN 413

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            +G +P P +   +DE + ++     + +  ++Q      A  + + +VS  ++Y   Q+
Sbjct: 414 -NGAVPAPTSPRAADEELKTLSRNAFETVGGHLQRSRFKAAAQEAMRVVSAANKYLSDQE 472

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW+LK+ +PDR   VL+  ++V+     LL  F+P  A K+ ++L
Sbjct: 473 PWKLKE-DPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHELL 516


>gi|291004605|ref|ZP_06562578.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 598

 Score =  210 bits (534), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 250/527 (47%), Gaps = 68/527 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I+  A   
Sbjct: 5   VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPISVQADKE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++T+   D+ +R   +    L +SYD F RTT   H++  + ++  +   G I     +
Sbjct: 65  GLSTRELADKYNRVITEDLQGLGLSYDLFTRTTTGNHYEVVQQIFLALHRNGYIIPKTTT 124

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQ--------WM 160
           G  S        D  +        Y GA G Q  N  +        NPV         ++
Sbjct: 125 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPAELINPVSRINGEKPDFV 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217
           E E  F  LSA+ + L  +  +   +      R+ V+ F ++ ++D+   ++SR   DWG
Sbjct: 185 ETEHLFLDLSAFTESLGKWLSTRTGW------RSNVLKFTQNLVEDMRPRAISRD-LDWG 237

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIG 264
           + IP     D     +YVW DA+  Y + +        +PD  K +FW        + +G
Sbjct: 238 VPIPLDGWRDQSMKRLYVWFDAVIGYFSASVEWARRTGDPDAWK-QFWTDPSAQGYYFMG 296

Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FHA  WPA L+  N              L LP ++ S  F+   G K S S G V
Sbjct: 297 KDNITFHAQIWPALLMGHNGQGDKGGEVGPYGQLNLPDEIVSSEFLTMSGSKFSTSRGTV 356

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G D LRYF+       +D  +  D   +RVN +LAN  GNLV+RSVSM  
Sbjct: 357 IYVRDFLREFGPDTLRYFISVAGPENQDTDFTWDEFVRRVNFELANEWGNLVNRSVSMAA 416

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+ +G +P P +   +DE + ++     + +  ++Q      A  + + +VS  ++Y   
Sbjct: 417 KN-NGAVPAPTSPRAADEELKTLSRNAFETVGGHLQRSRFKAAAQEAMRVVSAANKYLSD 475

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Q+PW+LK+ +PDR   VL+  ++V+     LL  F+P  A K+ ++L
Sbjct: 476 QEPWKLKE-DPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHELL 521


>gi|152979917|ref|YP_001352802.1| methionyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|187647729|sp|A6SX05|SYM_JANMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|151279994|gb|ABR88404.1| Methionyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 700

 Score =  209 bits (533), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 163/519 (31%), Positives = 245/519 (47%), Gaps = 53/519 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  AA+ A
Sbjct: 8   KLFVTTALPYANGAFHVGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEKA 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IYKGCY 124
           G+T + FV   +   +   D   I +D++  T    +H+  R +++++ D    I     
Sbjct: 68  GLTPQQFVANIAAGRKQYLDGFHIEFDNWSSTDSPENHELSREIYRRLRDDAKLITTKSV 127

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQYYNAQHN---------------------PVQ 158
             +Y    E +  D     E  K G   QY ++  N                     PV+
Sbjct: 128 EQFYDPVKEMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKHPYSTLTGATPVR 187

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-RNEVISFVK------SGLKDLSLSR 211
               + +FFRLS    K +++     E+ L  +R ++EV +  K       GL D  +SR
Sbjct: 188 -KSSDHFFFRLS--DPKCVAFLR---EWALDGQRLQSEVANKAKEWLEGEGGLGDWDISR 241

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNP----DGSKAKFWPADLHVIGKD 266
               +GI+IPD P    YVW+DA   YL T   Y D      D   A       H IGKD
Sbjct: 242 DAPYFGIEIPDAPGKYFYVWLDAPVGYLATLKNYFDKTGRDFDAFMADPSTEQYHFIGKD 301

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA-- 324
           I  FH ++WPA L  A++ +P  VF HGFI   GEK+SKS G  I P+  + E+G++   
Sbjct: 302 ITYFHTLFWPAMLKFADMKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYL-EIGMNPEW 360

Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           LRY++  +++   +D  +  D    RVN+DL     N+ SR+   I K +DG + T   +
Sbjct: 361 LRYYIAAKLSSKVEDIDFTSDDFIARVNSDLIGKYINIASRAAGFITKKFDGRVAT--DW 418

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             SD++ LS    V  EI+     +   +AL  ++     ++ Y DA KPWEL K     
Sbjct: 419 ATSDDAFLSRLRNVASEIQALYDQREYGKALRAIMEQADAINAYVDANKPWELAKDPAKE 478

Query: 444 AS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           A+   V    +E  R L I L+  +P LA ++   L +A
Sbjct: 479 AALQEVCSRLLEAFRILTIYLKPVLPALAKQVEAQLNIA 517


>gi|315656049|ref|ZP_07908947.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490113|gb|EFU79740.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 605

 Score =  209 bits (532), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 252/525 (48%), Gaps = 59/525 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I  AA+ 
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T +   ++N+R   +    L +SYD F RTT   H++T R ++K + D G +     
Sbjct: 63  AGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYETVRAMFKVVRDNGYMKVQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  +         +GA G   +A  N +                 ++
Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + YF  L A    L  + +   +       R  VI F K+ LKD+     T   DWG
Sbjct: 183 VETDHYFLDLPALARALNEWLDDREKNG---NWRPNVIKFSKNFLKDIKPRAMTRDIDWG 239

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADL--HVIGKDI 267
           I IP  +D    +YVW DA+  YL+ +       G   + W      P  L  + +GKD 
Sbjct: 240 IPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPEALSYYFMGKDN 299

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WPA +L  N              L LP +V S  F+  +G+K + S G VI  
Sbjct: 300 IVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYV 359

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDALRYF+       +D  +      +R N++L    GNLV+R+ SMI K +
Sbjct: 360 RDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKF 419

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G IP  G FT  D+ +L   +   + + + +++     ALA+++ LV E +RY    +P
Sbjct: 420 -GEIPPAGDFTAEDQELLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEP 478

Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++LK ++  DR  T+L+V  +V+  L +++  F+P  +N I  +L
Sbjct: 479 FKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVL 523


>gi|300781666|ref|ZP_07091520.1| methionine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533373|gb|EFK54434.1| methionine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 626

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 167/534 (31%), Positives = 251/534 (47%), Gaps = 73/534 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + +  A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A 
Sbjct: 15  ENVLVCVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGNNVLMVSGTDEHGTPLLVQAD 74

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K   D+ +R   +    L +SYD F RTT + H+   + L+K + D G + K  
Sbjct: 75  KEGVTVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYDNGYMIKET 134

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158
             G  S        + Y        GAD     Q  N  +        NPV        +
Sbjct: 135 TKGAISPSTGRTLPDRYIEGTCPICGADDARGDQCDNCGNQLDPVDLINPVSKINGETPE 194

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           ++E E +   L +  D L  + E+  ++      R  V+ F  + L+D+   S++R   D
Sbjct: 195 FVETEHFMLDLPSLGDALKEWLEARQDW------RPNVLKFSLNLLEDMRPRSMTRD-ID 247

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT-------GYLDNPDGSKAKFW--PA--D 259
           WGI +P     +DP   +YVW DA+  YL+ +       G LD    +   FW  PA   
Sbjct: 248 WGIPVPVEGWENDPGKKLYVWFDAVIGYLSASIEWAARSGNLD----AWKDFWQDPATRG 303

Query: 260 LHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISK 305
            + +GKD + FH+  WP  LL                 L LP +V S  F+   G K S 
Sbjct: 304 YYFMGKDNITFHSQIWPGELLGYAGKGTKGGQEHRLGTLNLPTEVVSSEFLTMSGSKFSS 363

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S G VI   + + E G D LRYF+        D  +  D   +R+N +LANG GNLV+R+
Sbjct: 364 SKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRT 423

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           VSM  K++ G +P PGA+ ESD+ IL + +R   E    +       A+ +++ +V E +
Sbjct: 424 VSMAHKNF-GEVPQPGAWNESDQRILDLAARTFGEAGAELGEAHFKNAITKIMHVVGEAN 482

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y   Q+PW+L K  +  +R STVL+  ++V+     +L  F+P  A K+ + L
Sbjct: 483 AYIAEQEPWKLAKDESQRERLSTVLWTALQVVSDCNAMLTPFLPHTAQKVHETL 536


>gi|84488913|ref|YP_447145.1| methionyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|121725522|sp|Q2NI31|SYM_METST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|84372232|gb|ABC56502.1| MetG [Methanosphaera stadtmanae DSM 3091]
          Length = 676

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 241/508 (47%), Gaps = 33/508 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           KL+IS A+ Y N   H+GH     I AD+ AR++R+ G+D L    TDEHG  IA  A+ 
Sbjct: 3   KLFISCALPYANGPCHLGHLRSTYIPADIYARYNRMTGVDTLMVCSTDEHGTPIAVRAEQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                K   D       +     +IS D F RTT++ H+   +  +  + +KG IY+   
Sbjct: 63  EKKNPKDITDIYHEIIGNDLKSCNISLDSFRRTTDEIHYKMAQDFFLDLYNKGYIYEKVI 122

Query: 125 SGWY------SLRDE-----AYYNDDEVYKGADGQYYNAQHNPVQWME------------ 161
              Y      SL D        Y + E  +G   +      NP   +E            
Sbjct: 123 DQLYCDECKRSLPDRYVEGTCPYCESEGARGDQCEVCGRHLNPTDLVEPHCLICDSTPHI 182

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + Y+F+L  ++  L  +  S+    LP   +N    ++  GLKD  ++R   +WGI 
Sbjct: 183 EQSKQYYFKLHEFEQPLKEWINSNEH--LPKNVKNFAKEWLNDGLKDWIMTRD-MNWGIP 239

Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNP-DGSKAKFWP-ADLHVIGKDILRFHAIYW 275
           +P  D    ++YVW +A   Y ++     N  D    ++W    +H IGKDI+  H ++W
Sbjct: 240 VPLNDAEGKVLYVWAEAFEGYQSSAASWANKHDLDWKEYWDDKTVHFIGKDIIYHHTLFW 299

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           P+ L+     LP  V   G++  +G K+S S G VI   + +++   D LRY++V     
Sbjct: 300 PSMLMGRGWNLPYSVVGGGYLSLEGRKMSTSKGWVIWVEDFLKKFDSDLLRYYMVINAPL 359

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  D  ++RVN +L + +GN + R+ +   K +DG IP  G++T+ D+       
Sbjct: 360 NKDTDFSWDDFQRRVNNELTDNLGNFIHRTFTFTNKFFDGKIPEMGSYTDEDKEFEEKIK 419

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +   +   + N      L  ++SL  E ++YF+ +KPW+  K + + A T + ++ +++
Sbjct: 420 ALPDVVANYIDNFQFREGLQGIMSLTKEANKYFNDKKPWKGVKEDIESAKTCINLSNQLV 479

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483
             L+I+L  ++P    KI  +L +  E+
Sbjct: 480 HVLSIVLTPYIPISVQKIRKVLNMPTEH 507


>gi|284989481|ref|YP_003408035.1| methionyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062726|gb|ADB73664.1| methionyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 597

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 242/526 (46%), Gaps = 64/526 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I TA+A+P  N   HIGH     + +DV +R+HR+ G  VL  +GTDEHG  I  AA  
Sbjct: 5   HILTAVAWPYANGPRHIGHVSGFGVPSDVFSRYHRMVGDRVLMVSGTDEHGTPITVAADA 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D+N+R        L +SYD F RTT   H    + ++  +   G ++    
Sbjct: 65  EGVSPREIADRNNRVIVGDLQSLGLSYDLFTRTTTGNHAAISQEIFLGLLKNGYVFPKTT 124

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159
            G  S        D  +        Y GA G   +    Q +PV              ++
Sbjct: 125 LGAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPVDLINPRSRINGETPKF 184

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +EEE YF  L A+   L  + +S   +      R  V++F K+ L DL     T   DWG
Sbjct: 185 VEEEHYFLDLPAFTRSLGDWLDSRKGW------RPNVLNFAKNLLTDLKPRSYTRDIDWG 238

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIGK 265
           + +P     D P   +YVW DA+  YL+ +         D +  ++W     +  + +GK
Sbjct: 239 VPVPLEGWRDRPDKRIYVWFDAVVGYLSASIEWARRSGDDDAWRQWWQTPDASAYYFMGK 298

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FHA  WPA LL  N              L LP +V S  F+  +G K S S   VI
Sbjct: 299 DNIVFHAEIWPAQLLGYNGEGDKGGTPGSLGRLNLPTEVVSSEFLTMEGRKFSSSRQVVI 358

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +     DALRYF+       +D  +      +R N +L  G GNLV+R+VSM  K
Sbjct: 359 YVRDFLARYDADALRYFIAAAGPESQDTDFTWAEFLRRNNDELVAGWGNLVNRTVSMAAK 418

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +  G +PTPG  T++D ++L   S     + E +       A A+ + +V E ++Y   Q
Sbjct: 419 NV-GAVPTPGELTDADRALLGTTSGAFGPVGELLSRNRQKAAAAEAMRVVGEANKYLSDQ 477

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            PW+LK+ +P R  TVL+  ++ +     LL  F+P  A K+ ++L
Sbjct: 478 APWKLKE-DPARRDTVLHTALQAVSDCNALLTPFLPHSAQKVHELL 522


>gi|212223727|ref|YP_002306963.1| methionyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558528|sp|B6YUN0|SYM_THEON RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|212008684|gb|ACJ16066.1| methionyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 733

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 252/525 (48%), Gaps = 52/525 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G +V+F +GTDEHG  I   A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVIFISGTDEHGTPITFRALKEGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD    + +   +   IS+D F RT    H+   +  + K  +   + K      
Sbjct: 66  SPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQDFFLKALENDHLIKKVSKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q                      N   NP+ + + 
Sbjct: 126 YCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGHPLTPEELINPRCNICGNPITFRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ ++  + +KL  + +S   +   +  +N V+ +++ GL++ +++R   +WGI +P 
Sbjct: 186 AHYYIKMQDFAEKLKEWVQSQEHWKPNV--KNTVLGWIEEGLEERAITR-DLNWGIPVPL 242

Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW------PADLHVIGKDILR 269
           D +     ++YVW +A   Y++ T      +G +    KFW         +H IGKD + 
Sbjct: 243 DDEDVKGKVLYVWFEAPIGYISITVEHLKREGKENEWKKFWLNLDGGTKVIHFIGKDNIP 302

Query: 270 FHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           FHAI+WPAFL++          A   LP  + ++ ++  +G+K S S    I   E ++ 
Sbjct: 303 FHAIFWPAFLMAYGKYKEEETEAEWLLPYDIPANEYLNLEGKKFSTSRNWAIWVHEFLDA 362

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG++P 
Sbjct: 363 FPADYLRYYLTAIMPETRDSDFSFADFKTKINEELVNNLGNFVHRALTFVNRYFDGVVPE 422

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D        + L+E  E +       AL +V+ L    +RYFD QKPW+  K 
Sbjct: 423 RGELDDLDRQAFEEIEKALKETGELISTYRFKDALRRVMELAIFGNRYFDYQKPWKTAKE 482

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           N +R +T + V++++++ L +LL+ F+P  + KI+ +L + +  R
Sbjct: 483 NRERTATTVNVSLQIVKVLGVLLEPFLPDASEKIWHLLNLEETKR 527


>gi|124027978|ref|YP_001013298.1| methionyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|187647727|sp|A2BLU2|SYM_HYPBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123978672|gb|ABM80953.1| Methionyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 572

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 255/536 (47%), Gaps = 49/536 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A  Y N+ PH+G+    I+ ADV AR+ RL G DV+F +G+DEHG  I   A   GV
Sbjct: 6   VASAWPYVNSIPHLGNLIGSILSADVFARYLRLKGEDVVFVSGSDEHGTPIEVEAIRRGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K   DQ     + + +   IS+D++ RT    H +  R    K+   G I++      
Sbjct: 66  HPKQLTDQAHEYVKKLFEEFRISFDNYTRTENPVHKEFVREFMMKLYQNGYIFEQDDVLP 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHN--------------------PVQWMEE 162
           Y  RD+ +  D  V     Y G +  Y +   N                    PV++ + 
Sbjct: 126 YCPRDKMFLPDRFVVGTCPYCGFEKAYGDQCDNCGRLLHPTELKNPRCSICGGPVEFRKS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--I 220
           + +FF L   Q+K+  +     E  LP   +N  ++ +K GLK  S++R    WGI    
Sbjct: 186 KHWFFNLPKLQEKVEKWLR---ESNLPPNVKNYSLNMLKEGLKPRSVTRDN-KWGIPAPF 241

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW----PADLHVIGKDILRFHAI 273
           P      +YVW DAL  Y++ T       G      K+W       ++ IGKD + FHAI
Sbjct: 242 PGAEGKTIYVWFDALLGYISATKEYGLKKGDPELWKKYWFNPETKTVYFIGKDNIPFHAI 301

Query: 274 YWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALRYFL 329
             PA L+ +  P  LP  + +  +++++GE+ SKS   G  ID  E +E +  D  R+ L
Sbjct: 302 ILPAMLIGSGDPYVLPSYISATEYLMYEGEQFSKSRRWGIWID--EALEILPADYWRFAL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +R     KD  +      + VN ++ + IGN V R +  I   +  ++P PG+++++D+ 
Sbjct: 360 IRMRPEAKDTNFTWSEFLRIVNTEMNDDIGNYVHRVLRFIESKFGSVVPEPGSYSDADKE 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                    +   +  +   + +AL +VI L  + ++Y + + PW+  KT+P  A+T +Y
Sbjct: 420 FEKAIRETPRRAEKYFEEVRLKQALGEVIELARKGNQYLNTKAPWDKIKTDPKDAATTMY 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPGFMLHK 501
           + V  +  LAILL  F P  A +++ +L     V +  R  Q+ +  +KPG  + K
Sbjct: 480 LAVNSVATLAILLAPFTPDSAERLWKMLNLPGSVHEPGRWKQAGEMIIKPGHRIGK 535


>gi|169601246|ref|XP_001794045.1| hypothetical protein SNOG_03483 [Phaeosphaeria nodorum SN15]
 gi|160705892|gb|EAT88688.2| hypothetical protein SNOG_03483 [Phaeosphaeria nodorum SN15]
          Length = 1177

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 182/344 (52%), Gaps = 34/344 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTF 214
           V+W  E  Y FRLS ++DKLL +Y+++P +I P  R  EV+  V++GL+DLS+SR  +  
Sbjct: 11  VEWSSETNYHFRLSFFRDKLLDFYKANPTWIAPEHRMKEVVQAVEAGLEDLSISRPYERL 70

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
            WGI++P D    +YVW+DAL NY+T  GY   P       WPAD  VIGKDI+RFH IY
Sbjct: 71  SWGIRVPSDDTQTIYVWLDALVNYITAAGYPWAPGRETVGGWPADCQVIGKDIVRFHCIY 130

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPAFL++ +LPLPK + +H      G K+SKS G V+DP   I+  G D +R+++  E  
Sbjct: 131 WPAFLMALSLPLPKHILTHAHWTLGGSKMSKSTGRVVDPFHAIDRFGPDVMRFYMGHEGG 190

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D  YD   + +  N  L N +GN+ SR    +L++    +           ++  V 
Sbjct: 191 IQDDASYDNIRIIQLYNKFLLNQLGNMASR----VLRNKKWSVKG---------AVERVG 237

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK--------------PW-ELKKT 439
           +R  +E +E   ++    +L  + S V +  +  D +K              PW ++   
Sbjct: 238 NRPAEEWQEGPGSRFWKNSLTTIASNVDQAFQLNDPRKAVRILADFVRGTSSPWAKILPF 297

Query: 440 NP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            P    +    +++   E +R + ILLQ ++P  AN + D L +
Sbjct: 298 GPGEPGEDVDKIIFEAAEALRMVGILLQPWMPNKANLLLDQLGI 341


>gi|256389800|ref|YP_003111364.1| methionyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256356026|gb|ACU69523.1| methionyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 605

 Score =  207 bits (526), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 244/531 (45%), Gaps = 71/531 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A   
Sbjct: 8   ILTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPILVQADKE 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+ +R   +    L ++YD F RTT + H+   + ++K + D G I+     
Sbjct: 68  GVTARELADRYNRVIAEDLQSLGLAYDLFTRTTTRNHYAVVQEIFKGLYDNGYIFPKTTM 127

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160
           G  S        D  +        Y GA G   +   N +                 +++
Sbjct: 128 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPDRLIDPRSRINGETPKFI 187

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217
           E E +F  L A+   L  + +    +      R  V+ F  + L DL   ++SR   DWG
Sbjct: 188 ETEQFFLDLPAFASVLGGWLQQQKTW------RPNVLKFSLNLLDDLQPRAISRD-LDWG 240

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--------PADL 260
           + +P     D P   +YVW DA+  YL+ +        +PD  +A FW        P   
Sbjct: 241 VPVPLEGWVDRPDKKLYVWFDAVVGYLSASVEWARRTGDPDAWRA-FWQTGPNGEAPDAY 299

Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306
           + +GKD + FH+  WPA LL                 L LP +V S  F+  +G K S S
Sbjct: 300 YFMGKDNIVFHSEIWPAMLLGYDGRGEKNGKPGSLGALNLPHEVVSSEFLTMEGRKFSSS 359

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
              VI   + +     DALRY++       +D  +      +R N +L  G GNLV+R++
Sbjct: 360 RAVVIYVRDFLSRYDADALRYYITAAGPETQDTDFTWSEFLRRNNDELVAGWGNLVNRAI 419

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM  K+  G IP     T  DE++L+        + + +       ALA+ + LV+E ++
Sbjct: 420 SMAAKNL-GQIPAAKDLTAEDEALLATSRGAFAVVGDLLDRCRFKAALAEAMRLVAEANK 478

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y    +PW+L KT+P+R +TVL+VT++V+     LL  F+P  + K+F +L
Sbjct: 479 YVSDHEPWKLAKTDPERMATVLHVTLQVVDDAKTLLTPFLPFSSEKVFHLL 529


>gi|300088361|ref|YP_003758883.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528094|gb|ADJ26562.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 556

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 236/511 (46%), Gaps = 43/511 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E++YI  A  Y N + H+GH A   + AD+ AR+HR  G +VL  TG+D HG  +   A+
Sbjct: 3   ERIYIGAAWPYANNRLHLGHVAGAYLPADIFARYHRTRGSEVLMVTGSDRHGTPVTIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G +     D     F +    L I++D +  T    H +  + ++ K+ +K  +YK  
Sbjct: 63  AEGKSPAEVADYYHAKFVENWSALGITFDLYTHTGTDNHREVVQDIFLKLLEKDHLYKET 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------Q 158
            S  Y      +  D  V          GA G   +A   P+                 +
Sbjct: 123 VSQPYCASCRRFLPDRYVEGTCPACGADGARGDQCDACGKPMNPSDLINIRCKLCGASPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F RLSA++  LL + E+  +   P  RR     ++K GL+D +++R    WGI
Sbjct: 183 FRETEHFFLRLSAFEKPLLDWIETQADHWRPSVRRF-TYQYLKDGLRDRAITRD-ITWGI 240

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADL---HVIGKDI 267
            +P    DD +  +YVW +A+  YL+ +        NP+  + KFW  D    + IGKD 
Sbjct: 241 PVPLDGYDDKR--IYVWFEAVIGYLSASKEWAQRSGNPEAWR-KFWQEDCKTYYFIGKDN 297

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH I WPA L+    L LP  V ++ F+  + +K+SKS    I   + +     DALR
Sbjct: 298 IPFHTIIWPAILMGYGGLNLPYDVPANEFLTVEAQKLSKSRNIAIWLEDFLSRYQADALR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L   +    D  +      +R N +L    GNLV+R +SMI K + G +P PG   E 
Sbjct: 358 YVLSVNMPDTSDTDFSWREFVRRNNDELVATWGNLVNRVLSMIQKHFAGRVPEPGELDER 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
             ++++     L  + E +       A+   ++L +E +RY D + PW+  KT+   A+ 
Sbjct: 418 SNAVIARAEATLNTMDEMLHACRFREAIKTAMALAAEANRYLDEKSPWKTVKTDKAAAAQ 477

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LY  + VI  L      F+P  + K+   L
Sbjct: 478 ALYTALTVISGLRTAFYPFLPFSSEKLHGFL 508


>gi|169837595|ref|ZP_02870783.1| Methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 257

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 8/246 (3%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +++F+K GL+DLS+SR TFDWGI +  +  +++YVW DALTNYLT  G+  +P+   A  
Sbjct: 1   MVAFIKQGLQDLSISRTTFDWGIPLELEEGHVIYVWFDALTNYLTGAGFAKDPE-EFANV 59

Query: 256 WPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W      HV+GKDILRFHAI WPA L+SA + LP  + +HG+   +GEK+SKSLGNV++P
Sbjct: 60  WTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKMSKSLGNVVNP 119

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E +E+ G+DA RY+L+RE   G+D  Y K  + +R+NADLAN +GNL++R++ M  K +
Sbjct: 120 EEEVEKYGLDAFRYYLMREATFGQDADYSKKAMIQRINADLANDLGNLLNRTIGMQKKYF 179

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +  +         D  I       L ++ +++ N      L  +   +S +++Y D    
Sbjct: 180 NSEVVLNETEESFDAEIKEFWENTLADLDKHINNYQFSEGLKDIWKFISRMNKYID---- 235

Query: 434 WELKKT 439
            ELKKT
Sbjct: 236 -ELKKT 240


>gi|329915423|ref|ZP_08276269.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327544901|gb|EGF30259.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 731

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/518 (31%), Positives = 242/518 (46%), Gaps = 47/518 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L+++TA+ Y NA  HIGH  E I AD+  RF R+ G +V F    D HG  I  AA NA
Sbjct: 43  QLFVTTALPYANAAFHIGHIMEYIQADIWVRFQRMQGHEVHFVCADDAHGAPIMIAADNA 102

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IYKGCY 124
           GVT + FV + +   +   D   I +D++  T  + +H   + +++ + D    I     
Sbjct: 103 GVTPQEFVARIAAGRQAPLDGFHIGFDNWHSTDGEENHALSKEIYRSLRDNAQLITTKTI 162

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY-------------------YNAQHNPVQWM 160
             ++      +  D  +       GA  QY                   Y+A    V  M
Sbjct: 163 EQFFDPVKNMFLADRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGAVPVM 222

Query: 161 EE-EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK------SGLKDLSLSRKT 213
           +  E +FF+LS ++        +  E  L  E  N+   +++      SGL D  +SR  
Sbjct: 223 KSSEHFFFKLSDHKCVEFLREWAFTEGRLQPEVANKAREWLEGKDDKESGLGDWDISRDA 282

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNP----DGSKAKFWPADLHVIGKDIL 268
             +GI+IPD P    YVW+DA   YL +   Y DN     D   A       H IGKDI 
Sbjct: 283 PYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDNTGRDFDAFMANPATEQYHFIGKDIT 342

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LR 326
            FH ++WPA L  A   +P  VF HGFI   GEK+SKS G  I P+  + ++G++   +R
Sbjct: 343 YFHTLFWPAMLHFAGRKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYL-DIGMNPEWMR 401

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y++  +++   +D  ++ D    RVN+DL     N+ SRS   I K +DG + T  A T 
Sbjct: 402 YYIAAKLSAKVEDVDFNPDDFVARVNSDLIGKYVNIASRSAGFIAKRFDGHVVTDWATTS 461

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
             ++ L     V  +I      +   +AL  ++     V+ Y DA KPWEL K NPD   
Sbjct: 462 --DTFLFGLRDVANDIHALYDGREYGKALRLIMEQADRVNAYVDANKPWELAK-NPDNDA 518

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           R   V    +E  R L + L+  +P LA ++  +L +A
Sbjct: 519 RLQEVCSRLLEAFRILTLYLKPVLPALAQQVETMLAIA 556


>gi|227504173|ref|ZP_03934222.1| methionine--tRNA ligase [Corynebacterium striatum ATCC 6940]
 gi|227199217|gb|EEI79265.1| methionine--tRNA ligase [Corynebacterium striatum ATCC 6940]
          Length = 631

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 249/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 24  ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 83

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R        L +SYD F RTT + H+   + L+K + + G + K  
Sbjct: 84  KEGVTVRELADRYNRQIVTDLAGLGLSYDMFTRTTTRNHYSVVQELFKGLYENGYMLKET 143

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADGQYYNA------QHNPV--------------Q 158
             G  S        + Y        GADG   +       Q +PV              +
Sbjct: 144 TQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETPE 203

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           ++E E +   L + +D L ++ ++  ++      R  V+ F  + L+D+     T   DW
Sbjct: 204 FIETEHFLLDLPSVKDALEAWLKTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 257

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVI 263
           GI IP     ++    +YVW DA+  YL+++        NPD  K  FW  D     +  
Sbjct: 258 GIPIPVEGWEENSAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWK-DFWQNDNARHYYFQ 316

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  ++   G K S S G 
Sbjct: 317 GKDNITFHSQIWPAQLLGYAGKGAKGGDLHKYGELNLPTEIVSSEYLTMSGSKFSSSKGV 376

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 377 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 436

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A  ++D++IL +          N++     +A+  ++ +V E + Y  
Sbjct: 437 HKNF-GEVPAPAALEDADKAILQLAEDTFAAAAANLEQSKFKQAITAIMHVVGEANAYIA 495

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW+L K  T  +R +TVL+  ++V+    ++L  F+P  A K+ + L
Sbjct: 496 AMEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 545


>gi|82753356|ref|XP_727645.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483588|gb|EAA19210.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 655

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/568 (24%), Positives = 265/568 (46%), Gaps = 94/568 (16%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL----FTTGTDEHGQK 57
           + ++ + I+T I Y N +PHIGHAY  ++ D + RF ++   +      F +G DEHG K
Sbjct: 80  ENKKGIIITTPIYYGNDKPHIGHAYCNVLVDTIYRFEKIKNEENKKKIIFFSGMDEHGLK 139

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I    +   +    +++  S  ++ M ++L++  + F RT+   H    + +WK + +KG
Sbjct: 140 IDNKTKELNMDKNKYLNNISNFYKKMNEMLNVDINLFYRTSNLFHKTFVQNIWKYLLNKG 199

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWMEEEGYF 166
            IYK  Y G+YS+ +E Y ++ EV K  + +              A  N +   EE  YF
Sbjct: 200 YIYKDVYRGYYSINEERYLSEMEVEKMENQKKEKKEKGEKDEKNIATSNIIYIEEENSYF 259

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F ++ ++  L+++Y+S+   I P   + E++  +++  K++ +SR   +WGI IPD+ + 
Sbjct: 260 FNINKFKGFLINFYKSNENIISPSYLKKEIMYHIQNDFKNICISRYNTEWGIPIPDEQKG 319

Query: 227 IMYVWIDALT-----------------------------------------NYLTTTGYL 245
            +YVW +AL                                          N + T   L
Sbjct: 320 TIYVWFEALLSYISSIAYVIKLYYNSKDENFDLKNITQNEEGILCTYNDILNLVDTYNDL 379

Query: 246 DNPDGSK------------------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           +N + +K                   K W   + VIGKDIL+FH I +   L S  + +P
Sbjct: 380 NNFENNKINLSNSKMDDKNNIRNLFKKIWNPYIQVIGKDILKFHGILYICLLNSLGIKIP 439

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + +  HG I ++ +K+SKSL N+I P  ++E+   D +R + +     G    YD    K
Sbjct: 440 ENILCHGLIKNENKKMSKSLNNIISPFTLLEKYNKDVIRLYFI-----GSGNIYDDRNFK 494

Query: 348 KRVNAD----LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           ++   +    L N +GNL+ R VS+ +++   +I     +  +  +        L ++  
Sbjct: 495 EKNLENFEFFLRNSVGNLLYRIVSLCIENNYKIIKKNNLYNFTILNEFKNSKTYLIKLFN 554

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           NM+  L+   L ++I  + ++++++   +PW++   N  + + ++Y   E I+  +I + 
Sbjct: 555 NMEYPLL---LEKLIMFIKKINKFYTYNEPWKI-INNSTKFNFIIYEIFESIKFFSIFMY 610

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491
            F+P ++  I        +N  F+S+D 
Sbjct: 611 PFIPNISLSIL-------KNIGFESIDN 631


>gi|257057215|ref|YP_003135047.1| methionyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256587087|gb|ACU98220.1| methionyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 595

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 242/524 (46%), Gaps = 66/524 (12%)

Query: 11  TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A+  G+
Sbjct: 3   TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNKVLMVSGTDEHGTPIQVQAEKEGL 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+ +R   +    L +SYD F RT+   H    + ++  +   G +     +G 
Sbjct: 63  TPQQAADKYTRQITEDLQGLGMSYDLFTRTSTGNHAKVVQEIFLALYRNGYVVPMTTTGA 122

Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWMEE 162
            S        D  +        Y GA G   +   N +                 +++E 
Sbjct: 123 ISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDATELRNPRSRINGETPKFVET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E  F  L A+ + L  +  +  E+      R  V++F ++ ++D+     T   DWG+KI
Sbjct: 183 EHLFLDLPAFTETLGRWLSTKTEW------RPNVLNFTRNLVEDMRPRPITRDLDWGVKI 236

Query: 221 P-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKDI 267
           P     D P    YVW DA+  Y + +      L +PD  + ++W        + +GKD 
Sbjct: 237 PLDGWRDQPMKRFYVWFDAVIGYFSASVEWARRLGDPDAWQ-QWWNNPDARGYYFMGKDN 295

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FHA  WPA LL  N              L LP ++ S  F+   G K S S G VI  
Sbjct: 296 ITFHAQIWPALLLGHNGEGDKGGGPGPYGKLRLPDEIVSSEFLTMSGSKFSTSRGTVIYV 355

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            + + E G D LRYF+       +D  +  D   +R+N +LAN  GNLV+RS+SM  K+ 
Sbjct: 356 HDFLREFGPDTLRYFISVAGPETQDTDFTWDEFVRRINFELANEWGNLVNRSISMAHKN- 414

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +G IP PG  T++DE + ++       +  ++       A  + + +VS  ++Y   Q+P
Sbjct: 415 NGGIPRPGTPTQADEDLKALAKAAFDTVGGHLSRSRFKLAAQEAMRVVSAANKYLSDQQP 474

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           W+LK  +P+R  TVL+  ++V+     LL  F+P  A K+ + L
Sbjct: 475 WKLKD-DPERRDTVLHTALQVVSDANTLLTPFLPHAAQKVHEAL 517


>gi|227548250|ref|ZP_03978299.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079673|gb|EEI17636.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 611

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 245/535 (45%), Gaps = 67/535 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   + + +  A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  + 
Sbjct: 1   MTSHDNVLVCVAWPYANGPRHIGHVAGFGVPSDVFARYLRMTGHNVLMVSGTDEHGTPLL 60

Query: 60  KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             A   GVT K   D+ N++   D+A  L +SYD F RTT + H+   + L+K +   G 
Sbjct: 61  VQADKEGVTVKELADRYNAQIVEDLAG-LGLSYDLFTRTTTRNHYAVVQELFKGLYANGY 119

Query: 119 IYKGCYSGWYS------LRDEAYYNDDEVYKGADGQYYNAQH-----------NPV---- 157
           + K    G  S      L D        +    D +                 NPV    
Sbjct: 120 MVKETTRGAISPSTGRTLPDRYIEGTCPICGATDARGDQCDTCGNQLDPADLINPVSKIN 179

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               ++++ E +   L A  D L  + E+  ++      R  V+ F  + L+D+     T
Sbjct: 180 GETPEFVDTEHFMLDLPALHDALKDWLETREDW------RPNVLKFSLNLLEDMRPRAMT 233

Query: 214 --FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA-- 258
              DWGI IP     D+P   +YVW DA+  YL+ +         PD  KA FW  PA  
Sbjct: 234 RDIDWGIPIPVEGWQDNPSKKLYVWFDAVVGYLSASIEWAARSGEPDAWKA-FWQDPATE 292

Query: 259 DLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKIS 304
             + +GKD + FH+  WPA LL                 L LP +V S  F+   G K S
Sbjct: 293 GFYFMGKDNITFHSQIWPAELLGYAGKGAAGGEPGELGELNLPTEVVSSEFLTMSGSKFS 352

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
            S G VI   + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R
Sbjct: 353 SSKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNR 412

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +VSM  K++ G +P PG   +SD+ IL +  R   E   ++       A+ +V+ +V E 
Sbjct: 413 TVSMAHKNF-GEVPAPGVLEDSDQRILELAERTFVEAGADLGEAKFKNAITKVMHVVGEA 471

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + Y    +PW+L K     DR +TVL+  ++V+     +L  F+P  A ++ + L
Sbjct: 472 NAYIAENEPWKLAKDPAQRDRLATVLWTALQVVSDCNAMLTPFIPHTAQRVHETL 526


>gi|306835647|ref|ZP_07468656.1| methionine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568491|gb|EFM44047.1| methionine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 610

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 248/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E L ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   ESLVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT + H+   + L+K +++ G + K  
Sbjct: 63  KEGVSVRELADRYNRQIVNDLANLGLSYDLFTRTTTRNHYSVVQELFKGLNENGYMLKET 122

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNA--QHNPV--------------Q 158
             G  S        + Y        GADG    Q  N   Q +PV              Q
Sbjct: 123 TKGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPVDLIDPVSKINGETPQ 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           ++E E +   L + +D+L  +  +  ++      R  V+ F  + L+D+     T   DW
Sbjct: 183 FVETEHFLLDLPSLKDELQKWLSTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI-- 263
           GI IP     D+    +YVW DA+  YL+ +         P+  K +FW  P   H    
Sbjct: 237 GIPIPVDGWQDNNAKKLYVWFDAVVGYLSASIEWAHRTGQPEAWK-EFWQDPETRHYYFQ 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  ++   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSKGGELHQYGELDLPTEIVSSEYLTMSGSKFSSSKGV 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G D LRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLAEFGPDPLRYFIAVAGPENNDADFTWDEFVRRINNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A  E DE+IL +           ++     +A+  ++ +V E + Y  
Sbjct: 416 HKNF-GEVPVPAALEERDEAILQLAEETFTTAGNLLEQSKFKQAIVSIMHVVGEANAYIA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Q+PW+L K  T  +R +TVL+  ++V+    ++L  F+P  A K+ + L
Sbjct: 475 SQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 524


>gi|296118240|ref|ZP_06836821.1| methionine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968798|gb|EFG82042.1| methionine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 628

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 248/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E L ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 17  ESLVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +   D+ +R   +    L +SYD F RTT + H+   + L+  + D G + K  
Sbjct: 77  KEGISVRELADRYNRQIVEDLAGLGLSYDMFTRTTTRNHYAVAQELFTGLYDNGYMIKET 136

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158
             G  S        + Y   +     ADG    Q  N  +        NPV        +
Sbjct: 137 MQGAISPSTGRTLPDRYIEGECPICHADGARGDQCDNCGNQLDPIDLINPVSKINGETPE 196

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           ++E E +   L A  D L  + ++  ++      R   + F  + +KD+     T   DW
Sbjct: 197 FVETEHFLLDLPALADVLTEWLKTREDW------RPNTLKFSLNLIKDMRPRAMTRDIDW 250

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLD-NPDGSKAKFW--PADLH--VI 263
           GI IP     ++    +YVW DA+  YL+++    Y   NPD  K  FW  P   H   +
Sbjct: 251 GIPIPIEGWENNDAKKLYVWFDAVIGYLSSSIEWAYRSGNPDAWK-DFWQDPEVRHYYFM 309

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  F+   G K S S G 
Sbjct: 310 GKDNITFHSQIWPAELLGYAGKGAKGGELHKYGELNLPTEIVSSEFLTMSGSKFSSSKGV 369

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + ++E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 370 VIYVKDFLKEFGPDALRYFIAVAGPENTDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 429

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P   TE+D  ILS+    L    E ++      A+   + +V E + Y  
Sbjct: 430 NKNF-GEVPVPATLTEADTKILSLAEETLATAAEYLEASKFKAAITAAMHVVGETNAYIA 488

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+    ++L  F+P  A K+ + L
Sbjct: 489 DQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPHTAQKVHETL 538


>gi|332159155|ref|YP_004424434.1| methionyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034618|gb|AEC52430.1| methionyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 718

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 257/527 (48%), Gaps = 59/527 (11%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A   G 
Sbjct: 6   VTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   + +       IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKALENGHLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q  +                        P+ + + 
Sbjct: 126 YCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISFRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             Y+ ++  + ++L  + E+    P        +N V+S+++ GL++ +++R   +WGI 
Sbjct: 186 AHYYIKMQDFAERLKRWIENQHWKPNV------KNMVLSWIEEGLEERAITR-DLNWGIP 238

Query: 220 IP--DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDI 267
           +P  +    ++YVW +A   Y++ T      +  P+  K K+W         +H IGKD 
Sbjct: 239 VPLEEMKDKVLYVWFEAPIGYISITIEYFRRIGKPNEWK-KYWLNLDGQTRVIHFIGKDN 297

Query: 268 LRFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           + FHAI+WPAFL++          A   LP  + ++ ++  +G K S S    I   E +
Sbjct: 298 IPFHAIFWPAFLMAYGKYKDNEVEAEWNLPYDIPANEYLTLEGRKFSTSRNWAIWVHEFL 357

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E    D LRY+L   +   +D  +     K R+N +L N +GN V R+++ + + +DG++
Sbjct: 358 EVWPADYLRYYLTTIMPETRDSDFSFADFKVRINEELVNNLGNFVHRAMTFVNRYFDGVV 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E D+  L+   +  +E+ E + N     AL +V++L S  ++YFD ++PW+  
Sbjct: 418 PERGELDELDKEALNEIKKTFEEVGELIMNYRFKDALKKVMNLASFGNKYFDHKQPWKTA 477

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           K + ++ +T + +++++++ L ILL+ F+P  + KI+ +L + +  R
Sbjct: 478 KEDREKTATTVNISLQIVKALGILLEPFLPDASEKIWHLLNLEEVKR 524


>gi|19552118|ref|NP_600120.1| methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62389783|ref|YP_225185.1| methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|25009354|sp|Q8NRZ4|SYM_CORGL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21323659|dbj|BAB98286.1| Methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325118|emb|CAF19599.1| METHIONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 610

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 247/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 63  KEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKET 122

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158
             G  S        + Y        G DG    Q  N  +        NPV        +
Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           ++E E +   L A  + L  + +   ++      R  V+ F  + L D+   ++SR   D
Sbjct: 183 FVETEHFLLDLPALAEALTEWLKGREDW------RPNVLKFSLNLLDDIRPRAMSRD-ID 235

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVI 263
           WGI IP     D+    +YVW DA+  YL+ +    Y      +   FW        + +
Sbjct: 236 WGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFM 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V S  F+   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGV 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + ++E G DALRYF+        D  +  D   +RVN +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P PGA  ESD+ IL + +   + +  N+        +++++ +V E + Y  
Sbjct: 416 HKNF-GEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+     +L  ++P  A K+ + L
Sbjct: 475 EQEPWKLAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 524


>gi|297562998|ref|YP_003681972.1| methionyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847446|gb|ADH69466.1| methionyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 605

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 247/527 (46%), Gaps = 64/527 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I TA+A+P  N   HIGH     + +DV +RF R+ G  VL  +GTDEHG  +   A  
Sbjct: 6   HILTAVAWPYANGPRHIGHVSGFGVPSDVFSRFQRMSGNHVLMVSGTDEHGTPVQVLADQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R   +    L +SYD F RTT   H+   + L+  + + G ++    
Sbjct: 66  EGVTPRELADRYNRIIAEDLVGLGLSYDLFTRTTTGNHYAVAQQLFTALHENGYVFAHTT 125

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QW 159
            G  S        D  +        Y GA G Q  N   Q +P+              ++
Sbjct: 126 KGAVSPSTGRTLPDRYIEGICPICGYDGARGDQCDNCGNQLDPIDLISPRSRINGEKPEF 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           ++ E +   L A+ D L ++ +         + R  V+ F  + ++DL     T D  WG
Sbjct: 186 VDTEHFMLDLPAFADALTTWLKGKEG-----QWRPNVLKFSLNLVEDLQPRAVTRDLNWG 240

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIG 264
           + +P     D+    +YVW DA+  YL+ +      +  P+  + ++W  D     + +G
Sbjct: 241 VPVPLEGWSDNANKRLYVWFDAVIGYLSASVEWARRIGEPEAWR-RWWQGDEARSYYFMG 299

Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH++ WPA LL  N              L +P +V S  F+  +G K S S   V
Sbjct: 300 KDNIVFHSVVWPAILLGHNGEGDRGGEPGPLGELKVPTEVVSSEFLTMEGRKFSSSRRVV 359

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + +E    DALRY+++      +D  +      +R N +L    GNLV+RS+SM  
Sbjct: 360 IYVRDFLERYSADALRYYIMAAGPETQDTDFTWAEFVRRNNDELVAAWGNLVNRSISMAA 419

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+  G IP  G  T+ D  +L         + E ++       L + +  V+E ++Y   
Sbjct: 420 KNL-GEIPAAGELTDEDRRVLEDSRAAFARVGERLERSQFKAGLQEAMRTVAEANKYISD 478

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Q PW LKKT+P+R +TVL+V +++++    LL  ++P+ ANK++ +L
Sbjct: 479 QAPWALKKTDPERMATVLHVALQLVQDANTLLTPYLPESANKVYAML 525


>gi|145295063|ref|YP_001137884.1| methionyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|187647715|sp|A4QCN5|SYM_CORGB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|140844983|dbj|BAF53982.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 610

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 247/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 63  KEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKET 122

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158
             G  S        + Y        G DG    Q  N  +        NPV        +
Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           ++E E +   L A  + L  + +   ++      R  V+ F  + L D+   ++SR   D
Sbjct: 183 FVETEHFLLDLPALAEALTEWLKGREDW------RPNVLKFSLNLLDDIRPRAMSRD-ID 235

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVI 263
           WGI IP     D+    +YVW DA+  YL+ +    Y      +   FW        + +
Sbjct: 236 WGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFM 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V S  F+   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGV 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + ++E G DALRYF+        D  +  D   +RVN +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P PGA  ESD+ IL + +   + +  N+        +++++ +V E + Y  
Sbjct: 416 HKNF-GEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+     +L  ++P  A K+ + L
Sbjct: 475 EQEPWKLAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 524


>gi|270307759|ref|YP_003329817.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153651|gb|ACZ61489.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 553

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 240/514 (46%), Gaps = 40/514 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  R F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHRLFMASWPKLGISWDCYTSTATANHARTAQEMFLSLYEKGYIYKDT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158
               +      +  D  V        Y+GA G       +  NA            NP +
Sbjct: 123 VCQPFCPHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++LL + E+   +   +   N  + ++K GLKD +++R   DWG+
Sbjct: 183 FKETEHFFLKLSAFEEELLRWVENKTHWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIPDDPQY---IMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPADL---HVIGKDILR 269
            +P  P Y    +YVW +A+  YL+ +          G   K+W  D    + IGKD + 
Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASIEWAVAKGQPGEWQKYWGGDTKSYYFIGKDNIP 298

Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH I WPA L+  + L LP  V S+ ++  + +K SKS    +   +V+    VD LRY 
Sbjct: 299 FHTIIWPAMLMGKSGLNLPYDVPSNEYLTIEAQKFSKSRNKAVWVDDVLSRYSVDTLRYL 358

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L   +    D  +      +R N +L    GNL  R ++M+ +++   +P  G   E   
Sbjct: 359 LSANMPESSDMDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNFGNKVPEYGELDERSL 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +++     +L E  + +       A+   +SL  E +RY D + PW+  K +   A+  L
Sbjct: 419 NLIEKTGAMLSETDKALHGCNFREAVKLAMSLAQEANRYLDEKAPWKEIKVDKAAAARSL 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           YV +  +  L +    F+P+ ++++   L    E
Sbjct: 479 YVAMAALSGLRVAFYPFLPESSSRLSTYLGFGSE 512


>gi|84997678|ref|XP_953560.1| methionyl-tRNA synthetase [Theileria annulata]
 gi|65304557|emb|CAI72882.1| methionyl-tRNA synthetase, putative [Theileria annulata]
          Length = 573

 Score =  203 bits (517), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 240/492 (48%), Gaps = 43/492 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++  I++ + Y N  PH+GHAY ++ +DVL RF  L G +     GTDEHG KI   
Sbjct: 64  KTDQRYLITSPLFYLNGPPHLGHAYTLVSSDVLKRFLILSGYECKLLVGTDEHGSKIKLT 123

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + N G + K +V+    ++ ++    DIS D  + T+E  H    + ++      G IY+
Sbjct: 124 SSNLGYSPKQYVNLMRNHYYELYKQYDISPDIVVHTSENDHKSKVKDVFNSFVRSGFIYR 183

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G + G++S +++ YY + ++  G     +      V  + E  YFF+LS++++KL+ +++
Sbjct: 184 GLHKGYFSPKEDLYYTESKLIDGKSPLGFE-----VSQVNEPAYFFKLSSWREKLIDFFK 238

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-------PDDPQYI------- 227
                I P     EV   ++S L D+++SR   DWGI I        D  + +       
Sbjct: 239 E--SVIKPNHSLIEVRKSLESDLNDIAISRSNCDWGIPINIMNNGETDQNETVCNETVCN 296

Query: 228 -------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
                  +YVW DAL  YLT           + K     +HVIGKDIL FH++ WP+ L+
Sbjct: 297 ETVSNETVYVWFDALLGYLTHFNSFPQLQDQELKNLKL-IHVIGKDILTFHSLLWPSILM 355

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + ++ +P K+  HG++L+KGEKISKSLGNV +    +E    D  R+ L+       D  
Sbjct: 356 ALDIQVPIKLLVHGWLLNKGEKISKSLGNVSN----LEPQLSDVSRFALMSLGDFSSDFE 411

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +D       +   L N   N   R  S++     D ++P     T +D  +++       
Sbjct: 412 FDSSIFDNSIKI-LRNKFANTFYRITSLLHNHKLDSVLP-----TNTDHELINKFHLYTV 465

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            I + M++  I + +  ++ + SEV+R+ +  + W +      + S +L     ++  ++
Sbjct: 466 NITKYMESFRIDKYIQVLMEMSSEVNRFIELNQIWTMGTCELLQISWLL---CTLLFYIS 522

Query: 460 ILLQAFVPKLAN 471
           + L    PKL+N
Sbjct: 523 VYLSPITPKLSN 534


>gi|57234814|ref|YP_181133.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123773627|sp|Q3Z9G6|SYM_DEHE1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57225262|gb|AAW40319.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 553

 Score =  203 bits (516), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 242/515 (46%), Gaps = 42/515 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  R F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHRLFMASWPKLGISWDCYTSTATANHARTAQQMFLSLYEKGYIYKDT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH----------NPVQ 158
               +      +  D  V        Y+GA G       +  NA            NP +
Sbjct: 123 VCQPFCPHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L  + E+   +   +   N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELTHWVETKTYWRTNV--LNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIPDDPQY---IMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL---HVIGKDIL 268
            +P  P Y    +YVW +A+  YL+ +         PD  + K+W  D    + IGKD +
Sbjct: 240 PLPL-PGYEGKRLYVWFEAVIGYLSASIEWAASKGQPDEWQ-KYWGGDTKSYYFIGKDNI 297

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            FH I WPA L+    L LP  V S+ ++  + +K SKS    I   +V+    VD LRY
Sbjct: 298 PFHTIIWPAMLMGRGGLDLPYDVPSNEYLTIEAQKFSKSRNKAIWVDDVLSRYSVDTLRY 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L   +    D  +      +R N +L    GNL  R ++M+ +++D  +P  G   E  
Sbjct: 358 LLSANMPESSDMDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNFDNKVPEYGELDERS 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            +++   S +L E  + +       A+   +SL  E +RY D + PW+  K +   A+  
Sbjct: 418 LNLIEKTSAMLFETDKALHGCNFREAIKLAMSLAQEANRYLDEKAPWKEIKVDKAAAARS 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           LYV +  +  L +    F+P+ ++++   L    E
Sbjct: 478 LYVAMAALSGLRVAFYPFLPESSSRLSTYLGFGSE 512


>gi|262182843|ref|ZP_06042264.1| methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 610

 Score =  203 bits (516), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 249/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G DVL  +GTDEHG  +   A 
Sbjct: 3   ETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R        L +SYD F RTT + H+   + L+K + + G + K  
Sbjct: 63  KEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIKET 122

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158
             G  S        + Y        GADG    Q  N  +        NPV        +
Sbjct: 123 TQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGETPK 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           +++ E +   L A +D L  + ++  ++      R  V+ F  + L+D+     T   DW
Sbjct: 183 FIDTEHFLLDLPAVKDVLEEWLKTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI-- 263
           GI IP     D+    +YVW DA+  YL+++        NPD  K  +W  P   H    
Sbjct: 237 GIPIPVEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWK-DYWQNPQARHYYFQ 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  ++   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGV 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A  ++D+ IL++         E ++     +A+  ++ +V E + Y  
Sbjct: 416 HKNF-GEVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW+L K  T  +R +TVL+  ++V+    ++L  F+P  A K+ + L
Sbjct: 475 AMEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 524


>gi|227832672|ref|YP_002834379.1| Methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453688|gb|ACP32441.1| Methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 617

 Score =  202 bits (515), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 249/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G DVL  +GTDEHG  +   A 
Sbjct: 10  ETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQAD 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R        L +SYD F RTT + H+   + L+K + + G + K  
Sbjct: 70  KEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIKET 129

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------Q 158
             G  S        + Y        GADG    Q  N  +        NPV        +
Sbjct: 130 TQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGETPK 189

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           +++ E +   L A +D L  + ++  ++      R  V+ F  + L+D+     T   DW
Sbjct: 190 FIDTEHFLLDLPAVKDVLEEWLKTREDW------RPNVLKFSLNLLEDMRPRTMTRDIDW 243

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI-- 263
           GI IP     D+    +YVW DA+  YL+++        NPD  K  +W  P   H    
Sbjct: 244 GIPIPVEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWK-DYWQNPQARHYYFQ 302

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  ++   G K S S G 
Sbjct: 303 GKDNITFHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGV 362

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 363 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 422

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A  ++D+ IL++         E ++     +A+  ++ +V E + Y  
Sbjct: 423 HKNF-GEVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVA 481

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW+L K  T  +R +TVL+  ++V+    ++L  F+P  A K+ + L
Sbjct: 482 AMEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETL 531


>gi|284033605|ref|YP_003383536.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812898|gb|ADB34737.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 585

 Score =  202 bits (515), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 245/524 (46%), Gaps = 64/524 (12%)

Query: 7   LYISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++I  A+A+P  N   HIGH     + ADV +R+ R+ G DVL  +GTDEHG  I   A+
Sbjct: 2   VHILAAVAWPYANGPRHIGHVSGFGVPADVFSRYQRMAGNDVLMVSGTDEHGTPILVQAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT   H+   + L++ +   G +    
Sbjct: 62  REGVSPRELADRYNRMIVEDLHGLGLSYDLFTRTTTGNHYAVAQELFRTVHRNGYLVPRT 121

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PV 157
             G  S        D  +        Y  A G   +   N                  PV
Sbjct: 122 AMGAISPSTGRTLPDRYIEGTCPICGYDAARGDQCDNCGNQLDAIDLREPRSRINGETPV 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
            ++E E +F  L A  D L S+ ++  ++      R  V+ F  + L D+     T   D
Sbjct: 182 -FVETEHFFLDLPALADALGSWLQTRTDW------RPNVLKFALNLLDDVRPRAITRDID 234

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HV 262
           WGI +P     ++P   +YVW DA+  YL+ +        +PD  +A +W  P  L  + 
Sbjct: 235 WGIPVPLPGWQENPAKRLYVWFDAVIGYLSASIEWARRTGDPDAWRA-WWCDPTALSYYF 293

Query: 263 IGKDILRFHAIYWPAFLLSANLP---------LPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +GKD + FHA  WPA LL  N P         LP +V S  F+  +G K S S   VI  
Sbjct: 294 MGKDNITFHAQIWPAELLGYNTPNPGRYGALNLPTEVVSSEFLTMEGRKFSSSRSVVISV 353

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             V+E  G DALRYF+       +D  +      +R N +L    GNLV+R+ SMI K++
Sbjct: 354 RHVLERYGPDALRYFVAAAGPESQDTDFTWAEFVRRTNDELVGTWGNLVNRTASMIAKNF 413

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G IP  G  T +D  +L+        + E++++  + +A+   + + +E ++Y   Q P
Sbjct: 414 -GAIPAAGELTTADHELLARSRAAFGTVGEHLEHHRLRQAVGAALRVATEANQYLSQQAP 472

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           W  K+++P R  T+L+V  +V+    +LL  F+P  A ++ + L
Sbjct: 473 W--KQSDPVRQGTILHVAAQVVADSNVLLTPFLPHSAQQVHETL 514


>gi|18977402|ref|NP_578759.1| methionyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|25009366|sp|Q8U221|SYM_PYRFU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18893089|gb|AAL81154.1| methionyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 724

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 250/519 (48%), Gaps = 55/519 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A N   
Sbjct: 6   VTAALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALNEKR 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   + +     + IS+D F RT    H+   +  + K  + G + K      
Sbjct: 66  SPREIVDEFHEHIKTAFQRVKISFDYFGRTELPVHYRLSQEFFLKALENGYLVKKVTKQA 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEE 162
           Y   D+ +  D  V     Y GA+ Q  +                       NP+ + E 
Sbjct: 126 YCEHDKRFLPDRFVIGTCPYCGAENQRGDQCEVCGRPLTPEILIEPRCAFCKNPITFRES 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ ++  +++KL  + +   E       +N V+ +++ GL++ +++R   DWGI +P 
Sbjct: 186 THYYIKMQEFEEKLKEWIK---EKDWKPNVKNMVLGWIEEGLEERAITR-DLDWGIPVPL 241

Query: 223 DPQ----YIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW------PADLHVIGKDIL 268
           D +     ++YVW +A   Y++ T      +  P+  K K+W         +H IGKD +
Sbjct: 242 DEEDMKNKVLYVWFEAPIGYISLTIEYFKRIGKPNEWK-KYWLNLDGQTRVIHFIGKDNI 300

Query: 269 RFHAIYWPAFLLS----------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            FHAI+WPAFL++          A   LP  + ++ ++  +G+K S S    I   E ++
Sbjct: 301 PFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWIHEFLD 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG++P
Sbjct: 361 VFPADYLRYYLTSIMPETRDSDFSFAEFKTKINEELVNVLGNFVYRALTFVNRYFDGIVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G   E D   L    +  +E+ + ++      AL +V++L    +RYFD ++PW+  K
Sbjct: 421 ERGELDELDRQALEEIEKTFEEVGKLIREYRFKDALKKVMNLAGFGNRYFDYKEPWKTIK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  R  T + +++++++ L ILL+ F+P  + KI+  L
Sbjct: 481 EDKTRTGTTINISLQIVKALGILLEPFLPDASEKIWHFL 519


>gi|146298619|ref|YP_001193210.1| methionyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|187647752|sp|A5FLM7|SYM_FLAJO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146153037|gb|ABQ03891.1| methionyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 711

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 250/534 (46%), Gaps = 44/534 (8%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M +  K Y I+ A+ Y N   HIGH A   + AD+ +R+ RL G DV F  G+DEHG  I
Sbjct: 1   MTQNPKRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLQGKDVAFICGSDEHGVAI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           +  A+  GVT +  +D+     R       IS++++ RT+ K HHDT    ++ + DKGD
Sbjct: 61  SMKAKKEGVTPQEVIDKYDGIIRKSFADFGISFNNYSRTSAKIHHDTASEFFRTLYDKGD 120

Query: 119 IYKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQH--NPVQW 159
             +      Y  +   +  D                 D+  K   G   NA    NP   
Sbjct: 121 FIEEVTEQLYDAKANQFLADRFVVGTCPKCDNPEAYGDQCEKC--GSTLNATDLINPKST 178

Query: 160 M--------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +        E + +F  L  Y D L  +  E H     P     +V S++  GL+  +++
Sbjct: 179 ITGETPILKETKHWFLPLDRYSDFLTKWILEGHKNDWKP-NVYGQVKSWIDGGLEPRAVT 237

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVI 263
           R   DWGI +P +      +YVW DA   Y+++T      +G     +W  +    +H I
Sbjct: 238 RD-LDWGIDVPVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDEETKLVHFI 296

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V ++ F+  +G K+S S    +   E +EE   
Sbjct: 297 GKDNIVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPD 356

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R V +  K YDG+IPTP
Sbjct: 357 KQDVLRYALTSNAPETKDNDFTWKDFQARNNNELVAIFGNFVNRVVVLTNKYYDGVIPTP 416

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
             FTE DE  L+        I  +++      AL +++++    ++Y   ++PW++ K N
Sbjct: 417 NEFTEIDEQTLAELKAYPAVISSSVERYRFREALGELMNVARLGNKYLADEEPWKVMKDN 476

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           P+R  T +YV +++   L++L + F+P  A K+  IL + D    F+   + LK
Sbjct: 477 PERVKTQMYVALQIAAALSVLAEPFLPFTAAKLSKILNLGDLKEHFEGFSKFLK 530


>gi|331694702|ref|YP_004330941.1| methionyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326949391|gb|AEA23088.1| Methionyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 597

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 241/526 (45%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A   
Sbjct: 5   VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYRRMVGDQVLMVSGTDEHGTPIQVQADAE 64

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   D+ N    RD+   L +SYD F RTT   H++  + L+  +   G +     
Sbjct: 65  GLTPRQLADKYNEVITRDLQG-LGLSYDLFTRTTTSNHYEVVQNLFLALHKNGYVVSKTA 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  V        Y GA G   +   N +                 Q+
Sbjct: 124 MGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGNQLDPADLINPRSKINGEVPQF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E E +F  L A+ + L  +  +  ++      R  V+ F  + ++DL     T   DWG
Sbjct: 184 VETEHFFLDLPAFAESLGQWLSTRTDW------RPNVLKFSANLVEDLKPRAITRDLDWG 237

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD-----LHVIGK 265
           + IP     D P   +YVW DA+  YL+ +      +PD    K W  D      + +GK
Sbjct: 238 VPIPLDGWRDQPMKRLYVWFDAVIGYLSASVEWARRSPDPDAWKQWWTDPSAEGYYFMGK 297

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH++ WPA LL  N              L LP ++ S  ++   G K S S G VI
Sbjct: 298 DNIVFHSVIWPALLLGQNGAGDRGGEPGVFGTLNLPSEIVSSEYLTMSGSKFSTSRGRVI 357

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + + E G DALRYF+       +D  +  D   +R N +LAN  GNLV+RS+SM  K
Sbjct: 358 YVGDFLREFGPDALRYFIAVAGPENQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHK 417

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +  G IP P A   +D  +L+V       +   +      +A  + + +V+  +RY   Q
Sbjct: 418 NV-GAIPKPLAPEAADAELLAVSRAGFDTVGGLLARNRFKQAAGEAMRVVTAANRYLSDQ 476

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW+ +K +P+R  T+L+  ++V++    LL  F+P  A ++ + L
Sbjct: 477 EPWK-RKDDPERRDTILHTALQVVQDANTLLTPFLPHAAQQVHEAL 521


>gi|148642131|ref|YP_001272644.1| methionyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222444690|ref|ZP_03607205.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350771|ref|ZP_05976188.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|187647750|sp|A5UJ98|SYM_METS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148551148|gb|ABQ86276.1| methionyl-tRNA synthetase, MetG [Methanobrevibacter smithii ATCC
           35061]
 gi|222434255|gb|EEE41420.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860526|gb|EFC92824.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 660

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 245/502 (48%), Gaps = 34/502 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQ 63
           K++IS A+ Y N   H+GH     + AD+ AR++R+   DVL    TDEHG  IA KA +
Sbjct: 3   KIFISCALPYANGPCHLGHIRSTYLPADIYARYNRMIDNDVLLVCATDEHGTPIAVKADK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
                 ++    +    RD+ + ++IS D+F RTT+  H++  +  + ++ +KG IYK  
Sbjct: 63  ENKKPIEIAKRYHDMIVRDV-ESMNISLDNFTRTTDDLHYEIAQNFFLELYNKGLIYKKD 121

Query: 124 YSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEG--------- 164
               Y  +   +  D  V           +G   +       P +  E +          
Sbjct: 122 IQQLYCEKCNKFLPDRYVEGICPVCGSEARGDHCEKCGRALEPTELDEPKCLTCGSTPVI 181

Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+LS ++D L  Y +++    LP   RN   +++K GL D  L+R   DWGI 
Sbjct: 182 KDTYQYFFKLSEFEDDLKDYIDNNEN--LPANVRNYAKNWLKEGLNDWVLTR-DMDWGIP 238

Query: 220 IPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-PADLHVIGKDILRFHAIYW 275
           +P D     ++YVW++A   Y+++        G K   +W    +H IGKDI+  H+I+W
Sbjct: 239 LPLDEAKGKVLYVWVEAFLGYISSAAQWSRETGIKWEDYWNDTAIHFIGKDIIYHHSIFW 298

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           P  L +    LP  +++  F+  +GEK+S S   V+   + +++   D LRY+L      
Sbjct: 299 PGLLKAYGCKLPDNIYAGEFLSLEGEKMSTSKNWVVWIADFVDKFDPDLLRYYLTINAPL 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  D  ++R N +LA+ IGN + R+ +   K +DG IP     +  D     +  
Sbjct: 359 NKDTDFSWDDFQRRNNDELADVIGNFLHRTFTFTHKFFDGEIPEYKNPSAEDNKFKEIIE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++   + E + +      L ++  +    ++YF+ Q+PW+  K +  +A+  LY++ ++ 
Sbjct: 419 KLPDTVGEYISDFEFRDGLLEIYRVAKIGNKYFNDQEPWKAVKEDMQKAANCLYLSNQLA 478

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           + LA +L+ ++P  A+ I  I+
Sbjct: 479 KTLAYVLKPYIPNKADAIAKII 500


>gi|91786826|ref|YP_547778.1| methionyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123060257|sp|Q12F12|SYM_POLSJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91696051|gb|ABE42880.1| methionyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 689

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 242/526 (46%), Gaps = 58/526 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R +L+++TA+ Y N   HIGH  E I AD+  R+ R+ G +V F    D HG  I  
Sbjct: 1   MSQR-RLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMQGHEVNFVGADDAHGAPIMI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +   +   D   IS+D++  T    +H   + ++  +   G I 
Sbjct: 60  AAEKAGKTPQQFVADIAAGRKPYLDGFHISFDNWHSTDGPENHQLAQQIYLDLKKAGLIE 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160
                 ++   D+  +  D   KG      A  QY        A + P   +        
Sbjct: 120 TKTVEQFFD-PDKNMFLPDRFIKGQCPKCGAKDQYGDNCEVCGAVYAPTDLINPYSALSG 178

Query: 161 ------EEEGYFFRLSA----------YQDKLLSYYESHP--EFILPIERRNEVISFVKS 202
                   E +FFRLS            QD +L    ++   E+  P   R  V      
Sbjct: 179 ATPVLKSSEHFFFRLSDPRCVAFLEQWTQDGMLQTEVANKVKEWFSP---RQNVDGTTSE 235

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--- 259
           GL D  +SR    +GI+IPD P    YVW+DA   YL +   L +  G     + AD   
Sbjct: 236 GLDDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKKGLDYDAYMADPGL 295

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEV 316
              H IGKDI+ FH ++WPA L  +    P  VF HGF+ ++ GEK+SKS G  +DP++ 
Sbjct: 296 EQYHFIGKDIITFHTLFWPAMLHFSGRKTPDNVFVHGFLTVNNGEKMSKSRGTGLDPLKY 355

Query: 317 IEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +  +G++   LRY+L  ++ A  +D  ++ +    RVNADL     N+ SR+   I K +
Sbjct: 356 L-NLGMNPEWLRYYLAAKLNARNEDIDFNPEDFMARVNADLVGKYINIASRAAGFISKRF 414

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           DG +  P A  ++   +L   S  +QE+    +     +AL +V+ L   V+ Y D  KP
Sbjct: 415 DGRLGEPSADGDALLEVLRGASPAIQELYAERE---YGKALREVMQLADRVNGYVDQNKP 471

Query: 434 WELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           WEL K     A    V  V +E  R L I L+  +P L  ++ D L
Sbjct: 472 WELAKQPGMEARLLDVCTVCIEAFRLLTIYLKPVLPALGTQVEDFL 517


>gi|213966064|ref|ZP_03394252.1| methionyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951262|gb|EEB62656.1| methionyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 608

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 257/530 (48%), Gaps = 71/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I TA+A+P  N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A+  
Sbjct: 4   IFTAVAWPYANGPRHIGHVAGFGVPSDVFARYQRMVGNDVLMVSGTDEHGTPLLVQAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   D+ +R   +D+A  L +SYD F RTT + H+   + L++ + + G + K   
Sbjct: 64  GVSVQELADRYNRQIVKDLAG-LGLSYDLFTRTTTRNHYVVVQELFRGLYENGYMVKQTT 122

Query: 125 SGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHN------------PV--------QW 159
            G  S        + Y        GA G   +   N            PV        ++
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPADLIDPVSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A  + L  + +   ++      R  V+ F  + LKD+   ++SR   DW
Sbjct: 183 VETEHFLLDLPALAEALTEWLQERKDW------RPNVLKFSLNILKDIRPRAMSRD-IDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVI 263
           G+ IP     ++    +YVW DA+  YL+ +      + +P+  + K+W  P  L  + +
Sbjct: 236 GVPIPLEGWSENGTKKLYVWFDAVVGYLSASIEWAWRIGDPEAWR-KWWNDPEALSYYFM 294

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V S  ++   G K S S G 
Sbjct: 295 GKDNITFHSQIWPAELLGYRGEGSRGGEVGQLGELNLPTEVVSSEYLTMSGSKFSSSKGV 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G D LRYF+       +D  +  D   +RVN +LAN  GNLV+R+VSM 
Sbjct: 355 VIYVKDFLAEFGPDPLRYFIAMAGPENQDTDFTWDEFVRRVNNELANSWGNLVNRTVSMA 414

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +PTPG  T++D  +L +  R   E+ + +        +   + LV E + Y  
Sbjct: 415 FKNF-GEVPTPGELTDADRELLDLAERSFAEVGDALALSRFRAGITAAMHLVGEANAYIA 473

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           AQ+PW+L K  +  +R +TVL+  ++V+    +LL  ++P+ A K+F+ L
Sbjct: 474 AQEPWKLAKDESQRERLATVLWTALQVVSDANVLLTPYLPESAQKVFETL 523


>gi|229819468|ref|YP_002880994.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511556|sp|C5C046|SYM_BEUC1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229565381|gb|ACQ79232.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 614

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 243/538 (45%), Gaps = 76/538 (14%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   HILSAVAWPYTNGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVLAEQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R   D    L +SYD F RTT + H+   + +++ +   G + +   
Sbjct: 63  EGVTPQELTDRYNRVIVDDLANLGLSYDLFTRTTTRNHYAVVQEMFRTVHKNGYMVEQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  +        Y GA G   +   N +                  +
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAVDLINPRSRINGEKPTF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + +F  L A  D L ++  +   +      R  V++F  + L DL     T   DWG
Sbjct: 183 IETQHFFLDLPALADALGAWLRTRTHW------RPNVLNFSLNLLDDLRPRAMTRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT-----------GYLDNPDGSKAKFW----P 257
           I +P     D+P   +YVW DA+  YL+ +           G    PD    + W    P
Sbjct: 237 IPVPLPGWEDNPAKRLYVWFDAVIGYLSASIEWARRQELAAGGAGTPDAEAWRAWWNPTP 296

Query: 258 A----DLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHK 299
                  + +GKD + FH+  WPA LL                 L LP +V S  F+  +
Sbjct: 297 GLDQQSYYFMGKDNITFHSQIWPAELLGYAGKGSRGGEPGIYGELNLPTEVVSSEFLTTE 356

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G++ S S G V+   +++     DALRYF+        D  +     K+R N +L  G G
Sbjct: 357 GKQFSTSRGVVVYVRDMLARYQPDALRYFIAVAGPESSDSDFTWSEFKRRTNDELVAGWG 416

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R+ +M+ K++ G +P PG     DE++L+       ++   ++ Q    A+ + + 
Sbjct: 417 NLVNRTATMVHKNF-GAVPEPGERLAVDEAVLATTRAGFAQVGRLLETQRQRAAVTEAMR 475

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +V EV++Y    +PW+L KT+ DR +TVL+   + +    +LL  F+P  A +I   L
Sbjct: 476 VVGEVNKYVSETEPWKL-KTDRDRLATVLHTATQAVADCNVLLAPFLPHAAQEIHSAL 532


>gi|134094215|ref|YP_001099290.1| methionyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|187647726|sp|A4G3S6|SYM_HERAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|133738118|emb|CAL61163.1| methionine tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Herminiimonas arsenicoxydans]
          Length = 710

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 248/526 (47%), Gaps = 54/526 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   HIGH  E I AD+  RF R+ G  V F    D HG  I  AA+ A
Sbjct: 8   KLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNQVDFVGADDAHGAPIMIAAEKA 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T + FV   +   +   D   I++D++  T    +H   + ++  +   G I      
Sbjct: 68  GLTPQQFVSNIAAGRKQYLDGFHIAFDNWSSTDSPENHQLAQQIYLDLKKAGLIASKTVE 127

Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161
            ++      +  D     E  K       G + +   A ++P   +              
Sbjct: 128 QFFDPEKNMFLPDRYIKGECPKCHTKDQYGDNCEVCAAVYSPTDLINPYSALTGATPVLK 187

Query: 162 -EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISF----------VKSGLK 205
             E +FF LS     A+ ++ +S  ++  +  L  E  N+V  +          +  GL 
Sbjct: 188 HSEHFFFTLSDPRCVAFLEEWVSGLDTDGKTHLQAEVANKVKEWFSARTNPDGTISEGLN 247

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADL 260
           D  +SR    +GI+IPD P    YVW+DA   YL +   L     +N D   A+     +
Sbjct: 248 DWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRGENFDAYMAEPALEQI 307

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEE 319
           H IGKDI+ FH ++WPA L  +    P KVF HGF+ ++ GEK+SKS G  +DP++ +  
Sbjct: 308 HFIGKDIVNFHTLFWPAMLKFSGRKTPNKVFVHGFLTVNNGEKMSKSRGTGLDPLKYL-S 366

Query: 320 VGVDA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +G++   LRY+L  +++   +D  ++ +    RVN+DL     N+ SR+   I K +DG 
Sbjct: 367 LGMNPEWLRYYLANKLSARNEDIDFNPEDFIARVNSDLIGKYVNIASRAAGFIAKKFDGR 426

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + +   +  +D+  +S    V  EI+     +   +AL  ++     ++ Y DA KPWEL
Sbjct: 427 VVS--DWATADDVFISKLRNVASEIQALYDQREYGKALRTIMEQADAINAYVDANKPWEL 484

Query: 437 KKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            K   + A+   V    +E  R L I L+  +P+LA ++  +L +A
Sbjct: 485 AKKPENSAALQEVCSRLLEAFRILTIYLKPVLPELAKQVEALLNIA 530


>gi|242398126|ref|YP_002993550.1| Methionyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264519|gb|ACS89201.1| Methionyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 732

 Score =  200 bits (508), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 246/530 (46%), Gaps = 52/530 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R +  +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I   A
Sbjct: 5   RMRFTVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPITFRA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G + +  VD    + +   +   IS+D F RT    H+   +  + K  +   + K 
Sbjct: 65  LKEGKSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENEYLIKK 124

Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQY--------------------YNAQHNPV 157
                Y   D+ +  D  V     Y GA+ Q                      N   N +
Sbjct: 125 VEKQAYCEHDKMFLPDRYVIGTCPYCGAEEQRGDQCEVCGHPLTPEKLINPKCNICGNSI 184

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + +   Y+ R+  +Q+KL  +      +   +  RN V+ ++  GL++ +++R    WG
Sbjct: 185 TFRDSAHYYIRMQEFQEKLKDWVLRQEHWKSNV--RNTVLGWINEGLEERAITR-DLGWG 241

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD-----LHVIG 264
           I +P    D    ++YVW +A   Y++ T      L   D  K  ++  D     +H IG
Sbjct: 242 IPVPLEDEDVKGKVLYVWFEAPIGYISITIEHFKKLGKEDEWKKYWFNIDGETRVIHFIG 301

Query: 265 KDILRFHAIYWPAFLLSAN----------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           KD + FHAI+WPAFL++              LP  + ++ ++  +G K S S    I   
Sbjct: 302 KDNVPFHAIFWPAFLMAYGKYKDEKGEFEWNLPYDIPANEYLNLEGRKFSTSRNWAIWVH 361

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E ++    D LRY+L   +   +D  +     KK++N +L N +GN V R+++ + + +D
Sbjct: 362 EFLDAFPADYLRYYLTAIMPETRDSDFSLGDFKKKINEELVNNLGNFVHRALTFVNRYFD 421

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G +P  G   + D   L    +  +E+   +       AL +V++L    ++YFD Q+PW
Sbjct: 422 GKVPETGELDDLDRKALKEIEKTFEEVNRLISRYQFKEALKRVMALAIFGNQYFDYQRPW 481

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +  KT+  R  T + V++++++ L ILL+ F+P  + KI+ +L + +  R
Sbjct: 482 KTAKTDKVRTGTTINVSLQIVKALGILLEPFLPDASEKIWHLLNIEEVKR 531


>gi|305681838|ref|ZP_07404642.1| methionine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658311|gb|EFM47814.1| methionine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 630

 Score =  200 bits (508), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/549 (29%), Positives = 254/549 (46%), Gaps = 86/549 (15%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 3   NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMTGANVLMVSGTDEHGTPLLVQADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+     D+ +R   +    L +SYD F RTT + H+   + L++ + D G + K   
Sbjct: 63  EGVSVTELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFRGLYDNGYMLKETT 122

Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159
            G  S        + Y        GADG    Q  N  +        NPV        ++
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A  ++L ++ ++  ++      R  V+ F  + L D+   ++SR   DW
Sbjct: 183 VETEHFLLDLPALAEELTAWLQTRNDW------RPNVLKFSLNLLSDIRPRAMSRD-IDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVI 263
           GI IP     D+P   +YVW DA+  YL+ +        NPD  +  FW  PA    + +
Sbjct: 236 GIPIPVEGWEDNPGKKLYVWFDAVVGYLSASIEWAHRSGNPDAWR-DFWTDPAATSYYFM 294

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP  LL                 L LP +V S  F+   G K S S G 
Sbjct: 295 GKDNITFHSQIWPGELLGYQGKGAKGGTLHRLGALNLPTEVVSSEFLTMSGSKFSSSKGV 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + ++E G D LRYF+       +D  +  D   +R+N +LANG GNLV+R VSM 
Sbjct: 355 VIYVKDFLKEFGPDPLRYFIAVAGPENQDTDFTWDEFVRRINNELANGWGNLVNRVVSMA 414

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
             ++ G +PTPG  TE+D+ IL +  +    + E +Q+    + +   + +V E + Y  
Sbjct: 415 ANNF-GKVPTPGELTEADQKILDLAEQAFDVVGEALQHSRFKQGITHAMHVVGEANAYVA 473

Query: 430 AQKPWELKK--------------TNP-------DRASTVLYVTVEVIRQLAILLQAFVPK 468
             +PW+L K              TN        DR +TVL+V ++V+     LL  ++P 
Sbjct: 474 EMQPWKLAKAIKTAKAGVETDSATNAADVAALEDRLATVLWVALQVVSDANTLLTPYIPN 533

Query: 469 LANKIFDIL 477
           +A ++ + L
Sbjct: 534 IAQQVHETL 542


>gi|256824214|ref|YP_003148174.1| methionyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256687607|gb|ACV05409.1| methionyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 600

 Score =  200 bits (508), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 239/529 (45%), Gaps = 72/529 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   H+GH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   KVLSAVAWPYANGPRHLGHVAGFGVPSDVYSRYMRMAGHDVLMVSGTDEHGTPILVQAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FVD+N+R   +    L +SYD F RTT   HH   R ++  +   G   +   
Sbjct: 63  AGKTPREFVDENNRAICEDLTALGLSYDLFTRTTTVNHHTVVREMFTAVHRNGYFVEQTQ 122

Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPV--------------QW 159
            G  S        D           D+  +G        Q +P               ++
Sbjct: 123 LGAISPSTGRTLPDRYIEGTCPICGDDSARGDQCDNCGNQLDPADLIDPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E   +   L A  D L  +     E       R  VI+F ++ L+++     T   DWG
Sbjct: 183 IETNHFLLDLPALADALGEWLA---ERDASGAWRPNVIAFSRNILEEIRPRAMTRDIDWG 239

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTT--------------GYLDNPDGSKAKFWPAD 259
           IK+P    +D    +YVW DA+  YL+ +               + ++P+   A F    
Sbjct: 240 IKVPLPDWEDAPKRLYVWFDAVIGYLSASIEWARRSGDPEAWRSWWNDPETLSAYF---- 295

Query: 260 LHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISK 305
              +GKD + FH+  WPA LL+ N              L LP  V S  F+  +G++ S 
Sbjct: 296 ---MGKDNIVFHSQIWPAELLAHNGQGSRGGEPGPFGELVLPTTVVSSEFMTLEGKQFST 352

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S G+VI   +V+E    DA+RY+L        D  +  +   +R+N +L  G GNLV+R+
Sbjct: 353 SRGHVIYVRDVMERQQPDAVRYYLSAVAPETSDADFSWEEFARRINGELVAGWGNLVNRT 412

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            SMI K + G IP PG   E D ++L         +   ++     +ALA+ + LVSE +
Sbjct: 413 ASMIAKSF-GEIPQPGELQEVDRALLEAVRGGYATVGGLLERFRNRQALAEAMRLVSEAN 471

Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            Y    +P++LK   N +R +TVL+   + + +L  LL  F+P  AN++
Sbjct: 472 AYISTTEPFKLKGAENAERLATVLWTCAQAVTELNTLLSPFLPHTANEV 520


>gi|160872857|ref|ZP_02062989.1| methionyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121656|gb|EDP46994.1| methionyl-tRNA synthetase [Rickettsiella grylli]
          Length = 553

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 254/544 (46%), Gaps = 55/544 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL +++A+ Y N   HIGH  E I AD+  RF ++ G   +F +G D HG  I  AAQ  
Sbjct: 7   KLLVTSALPYANGPLHIGHLLEHIQADIWVRFQKIRGHHCIFISGEDAHGTPIMLAAQQR 66

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            ++ +  V + +   + D+ D   I +D+F  T    +    R +++++ +KG+IYK   
Sbjct: 67  NISPEALVREIADAHQHDLTDFF-IEFDNFYTTHSPENEALTRFIYQRMKEKGNIYKKRI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
              Y    + +  D  V KGA            + +   + ++P+  +            
Sbjct: 126 KQAYDPSAKMFLPDRYV-KGACPCCKALDQYGDNCEVCGSTYSPLDLLDPKSIITGTSPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFFRLS Y + L  +     E  L  E  N+++ + K GL DL +SR    +G 
Sbjct: 185 VKESEHYFFRLSDYTEFLHQWITQ--EDHLADEISNKLLEWFKEGLHDLDISRDAPYFGF 242

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDILRFH 271
           KIP       YVWIDA   Y+ +   L   + D    ++W         H IGKDI+ FH
Sbjct: 243 KIPGTENKFFYVWIDAPIGYMASFKNLCSRHSDLHFDEYWSCPTTTELYHFIGKDIINFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           AI+WPA L SAN   P  +F HG++   G+K+SKS G  I     +  +  + LRY+   
Sbjct: 303 AIFWPAILKSANFRSPTAIFVHGYVTVNGQKMSKSRGTFISARHYLNHLDPEYLRYYYAT 362

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +   ++     +++N+DL   + N+ SR  S I K +   +         + ++
Sbjct: 363 KLSRKTEDIDFNLHDFIQKINSDLIGKLVNIASRCASFINKKFAHQLSK----NLLNPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTV 447
           +    R   EI  + +    +RA+  ++ L  + ++  DA+KPW L K NP   +RA  V
Sbjct: 419 METFIRQGDEISSHYEALNYNRAMKLIMELADKANQMIDAEKPWLLIK-NPNSVERAHAV 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFDP 505
             + + + R L + L+  +P  A K+   L +        + +QR K G   H+  TF P
Sbjct: 478 CSLGLNLFRILILYLKPVLPMTAKKVERFLNIPT-----LTWNQREK-GLFDHRINTFTP 531

Query: 506 IFPR 509
           +  R
Sbjct: 532 LLQR 535


>gi|171059439|ref|YP_001791788.1| methionyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|226710910|sp|B1XWM2|SYM_LEPCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|170776884|gb|ACB35023.1| methionyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 689

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 171/567 (30%), Positives = 260/567 (45%), Gaps = 75/567 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L+++TA+ Y N + HIGH  E I AD+  RF RL G  V F    D HG  I  AA+ A
Sbjct: 4   QLFVTTALPYANGKFHIGHIMEYIQADIWVRFQRLMGHQVHFVGADDAHGAPIMIAAEKA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   R+  D   IS+D++  T    +H+  + +++ + D G I      
Sbjct: 64  GKTPQQFVADIAAGRREYLDGFHISFDNWHSTDGPENHELAQSIYRALRDNGLIEVRSIE 123

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161
            ++      +  D     E  K GA  QY ++              NP   +        
Sbjct: 124 QFFDPEKGMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYTPTEVRNPYSALSGATPVLK 183

Query: 162 -EEGYFFRLSAYQDKLLSYYE--SHPEFILPIERRNEVISFV------KSGLKDLSLSRK 212
             + YFF+LS    +  +Y E  +H    L  E  N+V  +       K GL D  +SR 
Sbjct: 184 SSDHYFFKLS--DPRCAAYLEQWTHEGGKLQQEVINKVKEWFTKDDEGKGGLGDWDISRD 241

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA-------------D 259
              +GI+IPD P    YVW+DA   YL +     +  G +AK+  A              
Sbjct: 242 APYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDKGGPRAKYGEARSFDEFIADPAVEQ 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE 318
            H IGKDI  FH ++WPA L  +    P  VF HGF+ ++ GEK+SKS G  +DP++ + 
Sbjct: 302 YHFIGKDITYFHTLFWPATLHFSGRKTPNNVFVHGFMTVNNGEKMSKSRGTGLDPLKYL- 360

Query: 319 EVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +G++A  LRY++  ++ A  +D  ++ D    RVNADL     N+ SR+   + K + G
Sbjct: 361 SLGMNAEWLRYYIAAKLNAHVEDVDFNPDDFVSRVNADLVGKYINIASRAAGFLAKRFGG 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            + +         S+L         +    + +   +AL +V+ L   V+ Y DA KPWE
Sbjct: 421 RLSSD--LGVDGMSLLETLRAHRDTLTGLYEAREFGKALREVMGLADRVNEYVDANKPWE 478

Query: 436 LKKTNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRC- 485
           L K   + A  VL+    V +E  R L I L+  +P LA ++   L V     A  +R  
Sbjct: 479 LAKK--EGADAVLHDVCSVCIEAFRLLTIYLKPVLPALAAQVESFLQVEPLTFAQAHRAL 536

Query: 486 -------FQSLDQRLKPGFMLHKTFDP 505
                  +Q L QR+ P  +L   F+P
Sbjct: 537 GAHTIGSYQHLMQRVDPK-LLDALFEP 562


>gi|68566009|sp|Q8FR00|SYM_COREF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23492805|dbj|BAC17777.1| putative methionyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
          Length = 613

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 248/534 (46%), Gaps = 65/534 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  + 
Sbjct: 2   VRMTKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNNVLMVSGTDEHGTPLL 61

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GV+ +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G +
Sbjct: 62  VQADKEGVSVQELADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLHDNGYM 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV----- 157
            K    G  S        D  +          GA G Q  N  +        NPV     
Sbjct: 122 IKETTLGAISPSTGRTLPDRYIEGTCPICHADGARGDQCDNCGNQLDPADLINPVSKING 181

Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
              +++E E +   L A  D L ++ +   ++      R  V+ F  + L+D+     T 
Sbjct: 182 ETPEFVETEHFLLDLPALADSLTAWLKGREDW------RPNVLKFSLNLLEDIRPRAMTR 235

Query: 214 -FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PAD 259
             DWGI IP     D+    +YVW DA+  YL+ +        +P+  +  FW     + 
Sbjct: 236 DIDWGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRT-FWNDPETSS 294

Query: 260 LHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISK 305
            + +GKD + FH+  WPA LL                 L LP +V S  F+   G K S 
Sbjct: 295 YYFMGKDNITFHSQIWPAELLGYAGRGSRGGEVGDLGELNLPTEVVSSEFLTMSGSKFSS 354

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S G VI   + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+
Sbjct: 355 SKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRT 414

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           VSM  K++ G +P P A T+SD+ IL + +        +++      A+ Q++ +V E +
Sbjct: 415 VSMAHKNF-GEVPVPSALTDSDQRILDLAASTFDSAGADLELSKFKNAITQIMHVVGEAN 473

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y   Q+PW+L K  T  +R +TVL+  ++V+     +L  ++P  A K+ + L
Sbjct: 474 AYIAEQEPWKLAKDETQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 527


>gi|161485986|ref|NP_737577.2| methionyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507069|ref|ZP_05749969.1| methionine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259165347|gb|EEW49901.1| methionine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 610

 Score =  199 bits (507), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 246/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 63  KEGVSVQELADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLHDNGYMIKET 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV--------Q 158
             G  S        D  +          GA G Q  N  +        NPV        +
Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICHADGARGDQCDNCGNQLDPADLINPVSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           ++E E +   L A  D L ++ +   ++      R  V+ F  + L+D+     T   DW
Sbjct: 183 FVETEHFLLDLPALADSLTAWLKGREDW------RPNVLKFSLNLLEDIRPRAMTRDIDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263
           GI IP     D+    +YVW DA+  YL+ +        +P+  +  FW     +  + +
Sbjct: 237 GIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRT-FWNDPETSSYYFM 295

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V S  F+   G K S S G 
Sbjct: 296 GKDNITFHSQIWPAELLGYAGRGSRGGEVGDLGELNLPTEVVSSEFLTMSGSKFSSSKGV 355

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM 
Sbjct: 356 VIYVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMA 415

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A T+SD+ IL + +        +++      A+ Q++ +V E + Y  
Sbjct: 416 HKNF-GEVPVPSALTDSDQRILDLAASTFDSAGADLELSKFKNAITQIMHVVGEANAYIA 474

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+     +L  ++P  A K+ + L
Sbjct: 475 EQEPWKLAKDETQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETL 524


>gi|77360260|ref|YP_339835.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123589440|sp|Q3IL10|SYM_PSEHT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76875171|emb|CAI86392.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 673

 Score =  199 bits (506), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 235/505 (46%), Gaps = 43/505 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  V++ S    RD AD  +I +D++  T  + + +   +++ +++D G I + 
Sbjct: 63  KQGITPEEAVEKVSIERQRDFAD-FNIKFDNYHSTHSQENKELSELIYNRLNDAGHIKRH 121

Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G +     A ++P   +           
Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSENQNGDNCDSCGATYSPTDLINPRSVMSGAEP 181

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E YFF L A++  L  +  S     +  E  N++  +   GL+   +SR    +G
Sbjct: 182 ILKDSEHYFFDLPAFEGMLKEWLHSG---TIQQEMANKLDEWFTDGLQQWDISRDAPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFH 271
            +IP+ P    YVW+DA   Y+ +   L +  G     FW AD      H IGKDI+ FH
Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKKGIDFDAFWAADSDAELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  AN   P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+   
Sbjct: 299 SLFWPAMLEGANFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++ G  D   + +   +RVN+DL   + N+ SR    I K +DG +    + T     +
Sbjct: 359 KLSGGIVDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKL----SATVMQPQL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448
           L         I  + +N+   RA+ ++++L  + +++ DA  PW L K  T    A  V 
Sbjct: 415 LKEFQAAAPSITAHYENREFSRAIREIMALADKANQFIDAAAPWVLIKDETKQQEAHEVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473
            + + + R L   L+  +P++A+ +
Sbjct: 475 SLGLNLFRVLITYLKPVLPEMADNV 499


>gi|73668089|ref|YP_304104.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729563|sp|Q46F18|SYM_METBF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72395251|gb|AAZ69524.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 710

 Score =  199 bits (506), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 228/490 (46%), Gaps = 39/490 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    + AD+ AR  R +G DV F  G+D HG  I   A+  G+T
Sbjct: 11  VTCGLPYANGKAHIGHLRTYVPADIYARSLRKEGRDVTFVCGSDTHGTPIVVNAEELGIT 70

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K  V+   ++F +    L + +D F  T +  +H+    +  ++ +KG +Y       Y
Sbjct: 71  PKELVEVYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEKGYVYPKTIEIAY 130

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163
             +   +  D           E+ +G +      +H                P ++ ++E
Sbjct: 131 CPKCNRFLPDRYVEGSCPHCGEIARGDECDQGCGKHLEPGELLNPVCTICGGPAEYRQQE 190

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF+LS + D L+ Y  +  +    I  RN  + +VK GL D  ++R   +WG+K P  
Sbjct: 191 HFFFKLSEFSDYLMDYLSN--DLGGTINARNYALGWVKQGLTDWCITR-NLEWGVKFPGH 247

Query: 224 PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279
              ++YVW+DA   Y+  T  +      S  KFW  D   +H IG DI   H I+WPA L
Sbjct: 248 DDLVVYVWVDAPIGYIAFTEEWAAKAGDSWEKFWKNDGEIVHFIGGDITYHHCIFWPAML 307

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337
             A+  +P  V + G +  + +K SKS GNV+   E     G   D LRY+L    +  K
Sbjct: 308 KGADYSVPTAVVASGMVKIEDKKFSKSRGNVVWVGEDYLSHGFHPDLLRYYLASYTSHTK 367

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +  +    L++++N +L + +GN + R++    K+Y G +P+     E  E I     + 
Sbjct: 368 ELNFSWRVLQEKINTELVSVLGNFLYRTMLFAFKNY-GEVPSGELEPEVREEI----EKA 422

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L+E++  M      +A+   +SL S  + YF + +PW L K +      VLY  + + + 
Sbjct: 423 LKEVKAAMAEYEFKKAVDSAMSLASFGNTYFQSHEPWNLIKQDKAACGQVLYNCLHLAKA 482

Query: 458 LAILLQAFVP 467
           L ++ +   P
Sbjct: 483 LCLIFEPVTP 492


>gi|152965010|ref|YP_001360794.1| methionyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|187647730|sp|A6W6U1|SYM_KINRD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|151359527|gb|ABS02530.1| methionyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 600

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 242/523 (46%), Gaps = 62/523 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   HVLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVQAEQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ +R   +    L +SYD F RTT   H+   + +++ +   G +     
Sbjct: 63  EGLTPQQLADRYNRVIAEDLHGLGLSYDLFTRTTTANHYAVVQEMFRTVHRNGYMVARKG 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PVQ 158
            G  S        D  V        Y GA G   +   N                  PV 
Sbjct: 123 MGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGNQLDAIELKNPRSRINGETPV- 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           ++E E ++  L A  + L S+ ++  +       R  V+ F ++ L D+     T   DW
Sbjct: 182 FVETEHFYLDLPALAEALGSWLQTRADTG---RWRPNVLKFSQNLLADMKPRAMTRDIDW 238

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PA--DLHVIG 264
           GI +P     D+P   +YVW DA+  YL+ +         D +   +W  PA    + +G
Sbjct: 239 GIPVPLEGWEDNPAKRLYVWFDAVIGYLSASVEWARRSGDDDAWKAWWTDPAAESYYFMG 298

Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA LL+               NL LP +V +  F+  +G++ S S G V
Sbjct: 299 KDNITFHSQIWPAELLAYDGRGSAGGQPGPFGNLNLPTEVVASEFLTMEGKQFSSSRGVV 358

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +V+     DALRYF+        D  +       R N++L  G GNLV+R+ S+I 
Sbjct: 359 IYVRDVLARYQPDALRYFISAAGPENNDSDFTWQEFATRTNSELVAGWGNLVNRTASLIA 418

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+  G IP  G  T++D  +L+  S     +   ++       + + + +V EV++Y   
Sbjct: 419 KNV-GEIPAAGELTDADRDLLATTSGGFSTVGGFIEAHRQRAGIGEAMRVVGEVNKYLTE 477

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Q+PW++K ++P+R  +VL+VT + +     LL  F+P  A K+
Sbjct: 478 QEPWKIKNSDPERMKSVLHVTAQAVSDCRTLLSPFLPHSAQKV 520


>gi|315605052|ref|ZP_07880105.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313239|gb|EFU61303.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 613

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 243/525 (46%), Gaps = 61/525 (11%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA +A
Sbjct: 4   ILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADSA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124
           GV+ +   DQN+R   +    L +SYD F RTT   H+   + ++  + D G + +    
Sbjct: 64  GVSARELADQNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQVTR 123

Query: 125 -----SGWYSLRDEAYYNDDEVYKGADG----QYYNA--QHNPV--------------QW 159
                S   +L D  Y        GA+G    Q  N   Q +P               Q+
Sbjct: 124 AAISPSTGRTLPDR-YIEGTCPICGAEGARGDQCDNCGNQMDPTELINPHSRINGETPQF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E   YF  L A    L  + +   +       R  VI F K+ L D+     T   DWG
Sbjct: 183 VESTHYFLDLPALAQALSDWLDEREKSGT---WRPNVIKFSKNFLGDIRPRAMTRDIDWG 239

Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDI 267
           I +P   D P   +YVW DA+  YL+ +       G      ++W  P  L  + +GKD 
Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRSGDPEAWRRWWNDPEALSYYFMGKDN 299

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI  
Sbjct: 300 IVFHSQIWPAELLGYNGQGAKGGKPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYV 359

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            + +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +
Sbjct: 360 RDFLERYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASMIAKKF 419

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G IPTPG   E D ++L         +   +++     AL++ + LV E ++Y    +P
Sbjct: 420 -GQIPTPGELEEIDRALLDAVEAGFATVGNLIRHHRQKAALSEAMRLVGEANKYVTDTEP 478

Query: 434 WELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++LK     +R +TVL+   +V+  L ++L  F+P  AN +  ++
Sbjct: 479 FKLKAPEQRERLATVLWTLAQVVADLNLMLSPFLPHAANDVDRVM 523


>gi|52550379|gb|AAU84228.1| methionyl-tRNA synthetase [uncultured archaeon GZfos3D4]
          Length = 541

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 240/504 (47%), Gaps = 44/504 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +++A+ Y N + HIGH    + AD+  R  R  G DV+F +G+D HG  I  +A+  G+T
Sbjct: 11  VTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGYDVIFISGSDTHGTPIVLSAEAQGIT 70

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG------ 122
            +  V +   +F+ M   L++++D + RT  + +H     + KK+ + G ++K       
Sbjct: 71  PEEVVKKYHEHFKRMFQALNVNFDYYGRTDSESNHRRTTEIVKKLIENGYVHKKETKQAF 130

Query: 123 CYSGWYSLRDE----------AYYNDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
           C +    L D           A    DE  +G        +          +   + ++E
Sbjct: 131 CNTCGRFLPDRYVEGKCPYCGAVARGDECDQGCGKHLEPGEIIEPRCKLCGSKADFKQQE 190

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF LS++ D L++Y ++       +  RN    +VK  L+D  ++R   +WG+K P  
Sbjct: 191 HFFFNLSSFADFLIAYLDN---IGGTLNARNYAKEWVKKELRDWCVTR-NLEWGVKFPGR 246

Query: 224 PQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276
            + ++YVW+DA   Y++ T  L N    +    K+W  +    +H IG DI+  H I+WP
Sbjct: 247 DELVVYVWVDAPIGYISFTEELLNYTTDENDWRKYWKGNEATIVHFIGTDIIYHHCIFWP 306

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A L  A   LP  V + G +   G   SKS GNVI   E +E    D LRY+LV + +  
Sbjct: 307 AMLKGAGYSLPDAVVASGMVKINGGTFSKSRGNVIWVKEFLERFHPDTLRYYLVAQSSHT 366

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           K+  +  D    RVN +L   +GNLV R VS   K++  ++P      + DE + +  +R
Sbjct: 367 KELNFSWDSFSMRVNNELVAILGNLVHRVVSFAYKNFR-VVPE----GDVDEDVFAAIAR 421

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVE 453
             QE+   ++     + +   + L    + +F  ++PW L K      +R   ++   ++
Sbjct: 422 TKQEMISAVEEYEFKKLVDSAMKLADFGNSFFQREEPWHLIKKGDAGRERCGEIVRNVLQ 481

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           +I+ + I L+A +P    +++  L
Sbjct: 482 LIKAVCIGLEAVMPAKMAEVWSQL 505


>gi|300312383|ref|YP_003776475.1| methionyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075168|gb|ADJ64567.1| methionyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 690

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 242/520 (46%), Gaps = 57/520 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L+++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  AA+ A
Sbjct: 8   QLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEKA 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IYKGCY 124
           G+T + FV   +   +   D   I++D++  T    +H+  + +++ + D+   I     
Sbjct: 68  GITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKTI 127

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHN---------------------PVQ 158
             +Y      +  D  +       G   QY ++  N                     PV 
Sbjct: 128 DQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPVM 187

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-RNEVISFVK------SGLKDLSLSR 211
               E +FF+LS    K +++     E+ L   R + EV +  K       GL D  +SR
Sbjct: 188 -KSSEHFFFKLS--DPKCVAFLR---EWALDSNRLQPEVANKAKEWLDGEGGLGDWDISR 241

Query: 212 KTFDWGIKIPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
               +GI+IPD P    YVW+DA       L NY   TG   + D   A       H IG
Sbjct: 242 DAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR--DFDAFMADDKTEQYHFIG 299

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           KDI  FH ++WPA L  A    P  VF+HGFI   GEK+SKS G  I P+  + ++G++ 
Sbjct: 300 KDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYL-DIGMNP 358

Query: 325 --LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
             LRY++  ++ A  +D  ++ D    RVNADL     N+ SR+   I K ++G + T  
Sbjct: 359 EWLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVST-- 416

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            +  +D++ L+    V  EIR   + +   +AL  V+     ++ Y DA KPWEL K + 
Sbjct: 417 QWATADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSA 476

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             A    V    +E  R L + L+  +P+LA ++   L V
Sbjct: 477 RDAQLHEVCSRLLEAFRILTVYLKPVLPQLAAQVEAFLQV 516


>gi|255325447|ref|ZP_05366551.1| methionine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297533|gb|EET76846.1| methionine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 627

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 247/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 20  ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 79

Query: 64  NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             GV+ +   D+ +R    D+A+ L +SYD F RTT + H+   + L+K +   G + K 
Sbjct: 80  KEGVSVRELADRYNRQIVTDLAN-LGLSYDLFTRTTTRNHYSVVQELFKGLYANGYMLKE 138

Query: 123 CYSGWYSLRD-----EAYYNDDEVYKGADGQYYNA------QHNPV-------------- 157
              G  S        + Y        GADG   +       Q +PV              
Sbjct: 139 TTQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETP 198

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           +++E E +   L + +D+L  +  +  ++      R  V+ F  + L+D+     T   D
Sbjct: 199 KFIETEHFLLDLPSIKDELQKWLSTREDW------RPNVLKFSLNLLEDMRPRTMTRDID 252

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PADLHVI-- 263
           WGI IP     D+    +YVW DA+  YL+++    Y      +   FW  P   H    
Sbjct: 253 WGIPIPVEGWQDNNAKKLYVWFDAVIGYLSSSIEWAYRTGQPEAWKDFWQNPEARHYYFQ 312

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  ++   G K S S G 
Sbjct: 313 GKDNITFHSQIWPAELLGYAGKGNKGGELHQYGELNLPTEIVSSEYLTMSGSKFSSSKGV 372

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 373 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 432

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A  E D+ IL +     +     ++     +A+  ++ +V E + Y  
Sbjct: 433 FKNF-GEVPAPAALEEKDKEILQLAEETFETAGSLLEQSKFKQAITAIMHVVGEANAYIA 491

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K  T  +R +TVL+  ++V+    ++L  ++P  A K+ + L
Sbjct: 492 DQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPYLPFTAQKVHETL 541


>gi|324998150|ref|ZP_08119262.1| methionyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 596

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 242/527 (45%), Gaps = 68/527 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + TA+A+P  N   HIGH     + +DV AR+ R+ G  VL  +GTDEHG  I   A   
Sbjct: 5   VLTAVAWPYANGPRHIGHVSGFGVPSDVFARYRRMAGDRVLMVSGTDEHGTPIQVQADAE 64

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   D+ N    RD+   L +SYD F RTT   H++  + ++  +   G I     
Sbjct: 65  GLTPRQLADKYNDVITRDLQG-LGLSYDLFTRTTTSNHYEVVQHMFTALYKNGYIVPRTQ 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +        Y GA G   +   N +                  +
Sbjct: 124 LAAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPADLKNPRSKINGETPSF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFDW 216
           +E E +F  L A+ + L S+  +  ++      R  V+ F   +   LK  +++R   +W
Sbjct: 184 VETEHFFLDLPAFSEALGSWLSTRTDW------RPNVLKFSANLAENLKPRAITRD-LEW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD-----LHVIG 264
           G+ +P     D+P   +YVW DA+  YL+ +       PD    K W  D      + +G
Sbjct: 237 GVPVPLDGWSDNPMKKIYVWFDAVIGYLSASVEWARRGPDPDAWKQWWTDPEAQAFYFMG 296

Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH++ WPA LL  N              L LP +V S  ++   G K S S G V
Sbjct: 297 KDNITFHSVMWPAILLGHNGQGDRGGDPGRYGKLDLPSEVVSSEYLTMLGSKFSTSRGTV 356

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G DALRY +       +D  +  D   +RVN +LAN  GNLV+RSVSM  
Sbjct: 357 IYVGDFLREFGPDALRYHIAVAGPENQDVDFTWDEFVRRVNFELANEWGNLVNRSVSMAH 416

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+  G IP P A  ++D  +L+V       +   +      +A  + + +V+  +RY   
Sbjct: 417 KNV-GAIPAPTAPQQADAELLAVSRAGFDTVGGLLARNRFKQAAGEAMRVVTAANRYLSD 475

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Q+PW+ +K +P+R  T+L+  ++V++    LL  F+P  A K+ + L
Sbjct: 476 QEPWK-RKDDPERRDTILHTALQVVQDANTLLTPFLPHSAQKVHEAL 521


>gi|114319978|ref|YP_741661.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312171|sp|Q0AAG6|SYM_ALHEH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114226372|gb|ABI56171.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 675

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 232/500 (46%), Gaps = 43/500 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+ ARF RL G D  +    D HG  I   A+  
Sbjct: 4   KILVTSALPYANGPIHLGHLVEYIQTDIWARFQRLRGHDCHYVCADDAHGTPIMLKARER 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +    + RD AD L I +D++  T    +     +++ +++  G I +   
Sbjct: 64  GITPEALIAEVGEEHQRDFADFL-IEFDNYHTTHSDENRYFAELIYSRLNQAGHIDRKVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------- 159
              Y  + E +  D  +       GA+ QY        A + P +               
Sbjct: 123 KQAYDPKLEMFLPDRYIKGECPRCGAEDQYGDSCEACGATYTPAELKNAVSVVSGERPVE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFFRL  ++  L  +  + PE  L  E  N++  + K GL+   +SR    +G +
Sbjct: 183 RESEHYFFRLQDFEAMLREW--ASPEH-LQAEVANKLAEWFKEGLRSWDISRDAPYFGFR 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADL-HVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +  +L    G     W      A+L H IGKDI+ FHA+
Sbjct: 240 IPDTEDKYFYVWLDAPIGYMASFKHLCERKGLDFDDWWGPDSTAELYHFIGKDIIYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P ++ +HGF+   G+K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLHGAGFRKPTEICAHGFLTVNGQKMSKSRGTFIMARTWLDHLNPEYLRYYFAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D     D   +RVNADL   + N+ SR    I K ++G +      T  D ++  
Sbjct: 360 SASVHDLDLSLDDFTQRVNADLVGKLVNIASRCAGFIHKRFEGRL----GETLDDPALYR 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYV 450
             +   + I E  + +   RA+ ++++L  + ++Y D QKPW L K     DR   +   
Sbjct: 416 QFTAAGEHIAELYEKREFSRAMREIMALADQANQYVDEQKPWVLAKQEDQADRVQDICTQ 475

Query: 451 TVEVIRQLAILLQAFVPKLA 470
            + + R L + L+  +P+LA
Sbjct: 476 GLNLFRVLVVYLKPVLPRLA 495


>gi|326333771|ref|ZP_08200004.1| methionine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948353|gb|EGD40460.1| methionine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 601

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 248/524 (47%), Gaps = 64/524 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +G+DEHG  I  AA  A
Sbjct: 4   VLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILIAADEA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  VD+N R   +    L ++YD + RTT   HH   + L+  + + G   +    
Sbjct: 64  GMTPQELVDKNHRIIVEDLTSLGLTYDLYTRTTSANHHSVVQELFLGVYNNGYFVEQTSK 123

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV--------QWM 160
           G  S        D  +        Y GA G Q  N  +        NPV        +++
Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPDQLINPVSKINGETPEFI 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E + +F  L A  D L ++ +   +  L    R  VI F ++ LK++     T   DWGI
Sbjct: 184 ETQHFFLDLPALADALHAFLDDREQTGL---WRPNVIRFSQNILKEIRPRAMTRDIDWGI 240

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGK 265
           K+P     D+P   MYVW DA+  YL+ +        NP+  +  +W  P  L  + +GK
Sbjct: 241 KVPLDGWRDNPTKRMYVWFDAVIGYLSASIEWARRSGNPEAWR-DWWNDPEALSYYFMGK 299

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WPA LL+ N              L LP +V S  ++  +G+K S S   VI
Sbjct: 300 DNIVFHSQIWPAELLAYNGQGSKGGQPGAYDTLNLPTEVVSSEYLTMEGKKFSSSKKIVI 359

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++     DA RYF+        D  +      +R N +L  G GNLV+R+ ++I K
Sbjct: 360 YVRDLLSRYQPDAFRYFVAAAGPESNDSDFTWAEFVRRTNDELVAGWGNLVNRTATLIAK 419

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++ G +P  G  TE+D++IL         + + +      +A+ + +  V EV++Y    
Sbjct: 420 NF-GELPPAGTLTEADKAILDTVGGAFATVGDLIGRHRQKQAIGEAMRAVGEVNKYVTDL 478

Query: 432 KPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +PW+L K   DR    TVL+V  + +  L ++L  F+P  AN+I
Sbjct: 479 EPWKLAKDPSDRERLGTVLHVMAQCVADLNLILSPFLPFSANEI 522


>gi|300790060|ref|YP_003770351.1| methionyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299799574|gb|ADJ49949.1| methionyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 594

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 234/523 (44%), Gaps = 64/523 (12%)

Query: 11  TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A N   
Sbjct: 3   TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPITVQADNENS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+ +R   +    L +SYD F RTT   H +  + ++  +   G +      G 
Sbjct: 63  TPQETADKYTRQIGNDLQGLGLSYDLFTRTTTGNHAEVTQQIFLALHRNGYVVPKTTRGA 122

Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWMEE 162
            S        D  V        + GA G   +   N +                 +++E 
Sbjct: 123 ISPSTGRTLPDRYVEGTCPICGFDGARGDQCDNCGNQLDAAELINPKSRINGETPKFVET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E YF  L A+   L  +  +  ++      R  V++F K+ + D+     T   DWG+KI
Sbjct: 183 EHYFLDLPAFTKTLGDWLSTKTDW------RPNVLNFTKNLIDDMRPRPITRDLDWGVKI 236

Query: 221 P-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL---HVIGKDIL 268
           P     D P    YVW DA+  Y + +        NPD  +  +  AD    + +GKD +
Sbjct: 237 PLEGWRDQPLKRFYVWFDAVIGYFSASVEWARRSGNPDAWQEWWNNADARSYYFMGKDNI 296

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FHA  WPA L   N              L LP ++ S  F+   G K S S G VI   
Sbjct: 297 TFHAQIWPALLFGHNGEGDKGGEPGKYGKLHLPDEIVSSEFLTMSGSKFSTSRGRVIYVE 356

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + + + G D LRYF+       +D  +  D   +R N +LAN  GNLV+RS+SM  K+  
Sbjct: 357 DFLRDFGPDTLRYFISVAGPETQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKNV- 415

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP P A T +DE + ++  +       ++       A A+ + +V+  ++Y   Q+PW
Sbjct: 416 GAIPRPEAPTAADEDLKALSRKAFDTAGAHLARSRFKLAAAEAMKVVTAANKYLSDQEPW 475

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LK  +P R  TVL+  ++V+     LL  F+P  A K+ + L
Sbjct: 476 KLKD-DPTRRDTVLHTALQVVSDANTLLTPFLPHSAQKVHEAL 517


>gi|38233469|ref|NP_939236.1| methionyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|68565986|sp|Q6NIA5|SYM_CORDI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|38199729|emb|CAE49389.1| methionyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 610

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 161/529 (30%), Positives = 251/529 (47%), Gaps = 65/529 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +S A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 4   RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGAEVLMVSGTDEHGTPLLVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+ +R   +    L +SYD F RTT + H+   + L+K + + G + K   
Sbjct: 64  EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAVVQDLFKGLYENGYMIKETT 123

Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159
            G  S        + Y        GA G    Q  N  +        NPV        ++
Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPADLINPVSKINGETPKF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A  D L ++ +   ++      R  V+ F  + L+DL   ++SR   DW
Sbjct: 184 IETEHFLLDLPALADALAAWLKDRKDW------RPNVLKFSLNLLEDLRPRAMSRD-IDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIG 264
           GI IP     D+    +YVW DA+  YL+ +    Y      +  K+W     +  + +G
Sbjct: 237 GIPIPVEGWQDNGAKKLYVWFDAVVGYLSASIEWAYRTGDPEAWKKWWNDPESSGYYFMG 296

Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA LL                 L LP +V S  F+   G K S S G V
Sbjct: 297 KDNITFHSQIWPAELLGYQGKGAKAGSVHSLGELNLPTEVVSSEFLTMSGSKFSSSKGIV 356

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + ++E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  
Sbjct: 357 IYVKDFLKEFGADPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAY 416

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++ G +PTPG  TESD+ IL+        + E + +    + +   + +V E + Y   
Sbjct: 417 KNF-GEVPTPGELTESDKKILAQAEEAFGVVGEALAHSRFKQGITHAMHIVGEANAYIAE 475

Query: 431 QKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Q+PW+L K  +  +R +TVL+  ++V+    +LL  ++P +A ++ + L
Sbjct: 476 QEPWKLAKDESQRERLATVLWTALQVVSDCNVLLTPYLPHIAQQVHETL 524


>gi|156742957|ref|YP_001433086.1| methionyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|187647762|sp|A7NND5|SYM_ROSCS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|156234285|gb|ABU59068.1| methionyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 592

 Score =  196 bits (499), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 252/523 (48%), Gaps = 59/523 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + ++ A  Y N   H+GH A   + ADV AR+HRL G   L  +G+D HG  I  AA+
Sbjct: 3   DTILVAVAWPYANGPFHVGHIAGAYLPADVFARYHRLRGHRTLMVSGSDCHGTPITIAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  + +    F      L IS+D F +T    H+     ++ ++ + G +YK  
Sbjct: 63  REGITPQDVIRRYHPTFLKTFQALGISFDLFTQTYTDNHYRVTTDMFLRLLENGYLYKET 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPVQ 158
             G YS     +  D  V        Y  A G Q  +  H                 PV 
Sbjct: 123 MVGSYSETLGRFLPDRFVEGTCPNCGYPRARGDQCDSCGHLHDPQDLIAPRSVLDGAPVT 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFD 215
           + E E +F  L+  + +L ++ ES         R N ++   ++++ GL+  +++R   +
Sbjct: 183 FRETEHFFLDLAKLEPQLRAWIESVDRSYW---RANTLLFTQNWLREGLRGRAITRD-LE 238

Query: 216 WGIKIP-DDPQYI---MYVWIDALTNYLTT-------TGYLDN--------PDGSKAKFW 256
           WG+ +P DDP +    +YVW DA+  Y +        TG  D         PDGS     
Sbjct: 239 WGVPVPVDDPAFKDKRIYVWFDAVIGYYSASVEWAERTGAPDAWKDWWVCLPDGSA---- 294

Query: 257 PA-DLHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PA   + IGKD + FH I WPA L+   NL LP  V ++ F+  +G+K+S S    +   
Sbjct: 295 PARSYYFIGKDNIPFHTIIWPAMLIGYGNLALPYDVPANEFLNLEGDKMSTSRNWALWAP 354

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+ +    DA+RY+L+      +D  +      +RVN++L    GNL +R +S+  +++ 
Sbjct: 355 EIEDRYQPDAIRYYLIANGPETRDSNWSWADFVQRVNSELVATWGNLANRVLSITHRNF- 413

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G +P PG  T++D  +++   +  + +   +    +  AL++ ++L    ++Y   Q+PW
Sbjct: 414 GAVPQPGELTDADRQLIAATQQTFESVTALLDGVKLRAALSEAMALAQTANQYLSEQEPW 473

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +L + + +RA+TVL+V +  +  L +L   F+P  + ++ ++L
Sbjct: 474 KLVRHDQERAATVLFVALRTVDTLKVLFCPFLPFSSQRLHELL 516


>gi|225023038|ref|ZP_03712230.1| hypothetical protein CORMATOL_03086 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944261|gb|EEG25470.1| hypothetical protein CORMATOL_03086 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 633

 Score =  196 bits (499), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 253/552 (45%), Gaps = 89/552 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 3   NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMTGANVLMVSGTDEHGTPLLVQADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+     D+ +R   +    L +SYD F RTT + H+   + L++ + D G + K   
Sbjct: 63  EGVSVTELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFRGLYDNGYMLKETT 122

Query: 125 SGWYSLRD-----EAYYNDDEVYKGADG----QYYNAQH--------NPV--------QW 159
            G  S        + Y        GADG    Q  N  +        NPV        ++
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A  ++L ++ ++  ++      R  V+ F  + L D+   ++SR   DW
Sbjct: 183 VETEHFLLDLPALAEELTAWLQTRNDW------RPNVLKFSLNLLSDIRPRAMSRD-IDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVI 263
           GI IP     D+P   +YVW DA+  YL+ +     +  NPD  +  FW  PA    + +
Sbjct: 236 GIPIPVEGWEDNPGKKLYVWFDAVVGYLSASIEWAYHSGNPDAWR-DFWTDPAATSYYFM 294

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP  LL                 L LP +V S  F+   G K S S G 
Sbjct: 295 GKDNITFHSQIWPGELLGYQGKGAKGGTLHRLGELNLPTEVVSSEFLTMSGSKFSSSKGV 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + ++E G D LRYF+       +D  +  D   +R+N +LANG GNLV+R VSM 
Sbjct: 355 VIYVKDFLKEFGPDPLRYFIAVAGPENQDTDFTWDEFVRRINNELANGWGNLVNRVVSMA 414

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
             +++  +PTPG  TE+D+ IL +  +    + E +Q+    + +   + +V E + Y  
Sbjct: 415 ANNFE-KVPTPGELTEADQKILDLAEQAFDVVGEALQHSRFKQGITHAMHVVGEANAYVA 473

Query: 430 AQKPWELKKTN------------------------PDRASTVLYVTVEVIRQLAILLQAF 465
             +PW+L K                           DR +TVL+V ++V+     LL  +
Sbjct: 474 EMQPWKLAKAIKTAKAGAAGAGADSATDAADVAALEDRLATVLWVALQVVSDANTLLTPY 533

Query: 466 VPKLANKIFDIL 477
           +P +A ++ + L
Sbjct: 534 IPNIAQQVHETL 545


>gi|298345592|ref|YP_003718279.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298235653|gb|ADI66785.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 570

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 239/492 (48%), Gaps = 58/492 (11%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
           R+ G DVL  +GTDEHG  I  AA+ AG+T +   ++N+R   +    L +SYD F RTT
Sbjct: 2   RMRGHDVLMVSGTDEHGTPILVAAEAAGLTPRELANRNNRAIVEDLCQLGLSYDLFTRTT 61

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYY 150
              H+DT R ++K + D G +      G  S        D  +         +GA G   
Sbjct: 62  TGNHYDTVRAMFKVVRDNGYMKVQTTRGAISPSTGRTLPDRYIEGTCPICGAEGARGDQC 121

Query: 151 NAQHNPV-----------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           +A  N +                 +++E + YF  L A    L  + +   +       R
Sbjct: 122 DACGNQLDPTDLIRPRSKINGETPEFVETDHYFLDLPALARALNEWLDDREKNG---NWR 178

Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP--DDPQYIMYVWIDALTNYLTTT-----GY 244
             VI F K+ LKD+     T   DWGI IP  +D    +YVW DA+  YL+ +      +
Sbjct: 179 PNVIKFSKNFLKDIKPRAMTRDIDWGIPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRF 238

Query: 245 LDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------LPL 286
             +P+G + ++W  P  L  + +GKD + FH+  WPA +L  N              L L
Sbjct: 239 GQSPEGWR-QWWNNPESLSYYFMGKDNIVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNL 297

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P +V S  F+  +G+K + S G VI   +++    VDALRYF+       +D  +     
Sbjct: 298 PTEVVSSEFLTMEGKKFASSRGIVIYVRDMLSRYQVDALRYFISAAGPENQDSDFTWSEF 357

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +R N++L    GNLV+R+ SMI K + G IP  G FT  D+++L   +   + + + ++
Sbjct: 358 VRRTNSELVAAWGNLVNRTASMIAKKF-GEIPPAGDFTAEDQALLDAVNAGFETVGDLIE 416

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +     ALA+++ LV E +RY    +P++LK ++  DR  T+L+V  +V+  L +++  F
Sbjct: 417 SHHQKAALAEIMRLVGEANRYVTTTEPFKLKDESQRDRLGTILHVLAQVVTDLNLMMSPF 476

Query: 466 VPKLANKIFDIL 477
           +P  AN I  +L
Sbjct: 477 LPTSANAIDKVL 488


>gi|167523457|ref|XP_001746065.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775336|gb|EDQ88960.1| predicted protein [Monosiga brevicollis MX1]
          Length = 445

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 203/403 (50%), Gaps = 58/403 (14%)

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYK--GADG---QYYNAQHNPVQWMEEEGYFFRL 169
           ++G IYKG Y+GWY   DEAY    ++    G DG   +  +   +PV+ +EEE Y F+L
Sbjct: 3   ERGYIYKGSYAGWYCRSDEAYLTSTQIEDRIGPDGTLVKVSSESGHPVELVEEENYMFKL 62

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYI 227
            A    +  + E+    I P  R+ E+++ + S L DLS+SR  +   WGI +P DP+  
Sbjct: 63  GALVPDVRRWVETS-NVIWPPNRKAEILNMLDSKLPDLSISRPRRKLQWGIPVPHDPEQT 121

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           +YVW+DALTNYLT  G+        A   P  LHVIGKDI++FH +YWPAFLL+A L LP
Sbjct: 122 IYVWVDALTNYLTAQGF----PTQGAPTHPM-LHVIGKDIVKFHCVYWPAFLLAAGLELP 176

Query: 288 KKVFSHGFILHKGEK---------------------------ISKSLGNVIDPIEVIEEV 320
           ++V  HG     G K                           +SKSLGNV+DP++++++ 
Sbjct: 177 QQVLVHGHWTMDGRKYSLRPPLVCPALQPTALPIHAIVALDPMSKSLGNVVDPVQLLDQA 236

Query: 321 -GV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDG 375
            GV D +RY+L++E     DG +    L   V  +LA+ +GNL+SR  +  +    ++ G
Sbjct: 237 DGVPDLVRYYLLKESRLDTDGDFSYRRLNA-VTKELADTVGNLLSRISNQRVNSALEFPG 295

Query: 376 M----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +     P P    E    ++++ S V +E+R           +  ++ L    +   +  
Sbjct: 296 LSVDDAPPPSPCQE----LITLGSSVAEEVRACYDRHDFGAGIEALLPLARRCNALINEL 351

Query: 432 KPWELKKTNPDRASTVLYVTV----EVIRQLAILLQAFVPKLA 470
           +PW+L + +   A   L   +    E +R  A LL    P L+
Sbjct: 352 EPWKLARDDSPAAQATLKSLLGGAFESLRVTAALLYPVTPALS 394


>gi|268324999|emb|CBH38587.1| putitive methionyl-tRNA synthetase, partial sequence [uncultured
           archaeon]
          Length = 539

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 241/506 (47%), Gaps = 46/506 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N + HIGH    + AD+  R  R  G DV+F +G+D HG  I  +A+  G
Sbjct: 9   VLVTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGHDVIFISGSDTHGTPIVLSAEAEG 68

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---- 122
           +  +  V +   +F+ +   L++ +D + +T  + +H     + KK+ D G +Y      
Sbjct: 69  IAPEAVVARFHDHFKRIFKALNVDFDYYGQTNSECNHKRTGEIVKKLIDSGYVYMEETKQ 128

Query: 123 --CYSGWYSLRDE----------AYYNDDEVYKGADGQYYNAQ---------HNPVQWME 161
             C +    L D           A    DE  +G        +          N   + E
Sbjct: 129 AFCDTCGRFLPDRYVEGECPYCGASARGDECDQGCGKHLEPGEIIAPKCKICGNEAVFKE 188

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E +FF LS + D L SY ++     L   R  RN    +VK  L+D  ++RK  DWG+K
Sbjct: 189 QEHFFFHLSRFADFLASYLDN-----LGGTRNARNYAREWVKKELRDWCITRK-LDWGVK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274
            P     ++YVW+DA   Y++ T  L   D  K + +W  D    +H IG DI+  H I+
Sbjct: 243 FPGREDLVVYVWVDAPIGYISFTEELMGGDERKWREYWKEDGATIVHFIGTDIIYHHCIF 302

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  A   LP  V + G +   G   SKS G+V+   + +E    D LRY+LV + +
Sbjct: 303 WPAMLKGAGYSLPDAVVASGMVKIDGRTFSKSRGDVVWTSDFLERFHPDTLRYYLVAQSS 362

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K+  +  +    RVN +L   +GNLV R VS   K++ G++P      E DE++++  
Sbjct: 363 HTKELNFSWNSFFLRVNNELVGILGNLVHRVVSFAYKNF-GVVPE----GEIDEAVITKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVT 451
           +   +E    ++     + +  V+ L    + YF  ++PW L K      +R   ++   
Sbjct: 418 TETREEAINAVEEYEFKKLVDAVMKLADFGNGYFQREEPWHLIKKGDKERERGGEIIKNV 477

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           +++++ + ILL+A +P+   +++  L
Sbjct: 478 LQILKAVCILLEAVMPEKMAEVWSQL 503


>gi|311740856|ref|ZP_07714683.1| methionine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311304376|gb|EFQ80452.1| methionine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 627

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 246/530 (46%), Gaps = 65/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 20  ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 79

Query: 64  NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             GV+ +   D+ +R    D+A+ L +SYD F RTT + H+   + L+K +   G + K 
Sbjct: 80  KEGVSVRELADRYNRQIVTDLAN-LGLSYDLFTRTTTRNHYSVVQELFKGLYANGYMLKE 138

Query: 123 CYSGWYSLRD-----EAYYNDDEVYKGADGQYYNA------QHNPV-------------- 157
              G  S        + Y        GADG   +       Q +PV              
Sbjct: 139 TTQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETP 198

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           +++E E +   L + +D+L  +  +  ++      R  V+ F  + L+D+     T   D
Sbjct: 199 KFIETEHFLLDLPSIKDELQKWLSTREDW------RPNVLKFSLNLLEDMRPRTMTRDID 252

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PADLHVI-- 263
           WGI IP     D+    +YVW DA+  YL+++    Y      +   FW  P   H    
Sbjct: 253 WGIPIPVEGWQDNNAKKLYVWFDAVIGYLSSSIEWAYRTGQPEAWKDFWQNPEARHYYFQ 312

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP ++ S  ++   G K S S G 
Sbjct: 313 GKDNITFHSQIWPAELLGYAGKGNKGGELHQYGELNLPTEIVSSEYLTMSGSKFSSSKGV 372

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM 
Sbjct: 373 VIYVKDFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMA 432

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G +P P A  E D+ IL +     +     ++     +A+  ++ +V E + Y  
Sbjct: 433 FKNF-GEVPAPAALEEKDKEILQLAEETFETAGSLLEQSKFKQAITAIMHVVGEANAYIA 491

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW+L K     +R +TVL+  ++V+    ++L  ++P  A K+ + L
Sbjct: 492 DQEPWKLAKDEAQRERLATVLWTALQVVSDCNVMLTPYLPFTAQKVHETL 541


>gi|88859987|ref|ZP_01134626.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817981|gb|EAR27797.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 673

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 236/505 (46%), Gaps = 43/505 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ ARF +L G    +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWARFQKLRGHQAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  V + S    RD AD  +I +D++  T    +     +++ +++DKG I K 
Sbjct: 63  KQGITPEEMVARVSVERQRDFAD-FNILFDNYHSTHSPENKVLSELIYNRLNDKGHIKKR 121

Query: 123 CYSGWYSLRDEAYYND----------DEVYKGADG-QYYNAQHNPVQWME---------- 161
             S  +      +  D          D V +  D      A ++P +  +          
Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPSCDAVDQNGDSCDVCGATYSPTELKDPRSVMSGATP 181

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L A++  L ++  S     +  E  N++  +   GL+   +SR    +G
Sbjct: 182 VLKDSEHFFFDLPAFEGMLKTWLRSGS---IQSEMANKLEEWFADGLQQWDISRDAPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFH 271
            +IP+ P    YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ FH
Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKTGLNFDEFWSKDSDAELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A+   P  VF+HGF+   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 299 SLFWPAMLEGADFRKPTNVFAHGFVTVNGAKMSKSKGTFIKARTYLDHLNPEYLRYYFAA 358

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++  G  D   + +   +RVNADL   + N+ SR  S I K +DG +         D ++
Sbjct: 359 KLNSGITDLDLNLEDFAQRVNADLVGKVVNIASRCASFITKKFDGTLSE----VILDPAL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448
           +S      + I  + + +   RA+ ++++L  + +++ DAQ PW L K  +  + A  V 
Sbjct: 415 ISEFQNASESIANHFEGRDYSRAIREIMALADKANQFIDAQAPWVLIKDESKQELAHQVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473
              + + R L + L+  +PK+A+ +
Sbjct: 475 TQGLNMFRLLMVYLKPVLPKMASDV 499


>gi|309791194|ref|ZP_07685726.1| methionyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226756|gb|EFO80452.1| methionyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 597

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 249/527 (47%), Gaps = 64/527 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   H+GH     + +D+ ARF RL G  VL  +GTDEHG  I  AA 
Sbjct: 10  EHILVAVAWPYANGPRHVGHVAGFGVPSDIFARFQRLRGNHVLMVSGTDEHGTPITLAAD 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +    D    L +SYD F RTT + H+   + L++ +  KG I +  
Sbjct: 70  KEGVTPRDIADRYNEVIGDDLRNLGLSYDTFTRTTTQNHYHVTQDLFQTLYHKGYILRQE 129

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPVQWME----------- 161
             G +S        D  V        YK A G   +    Q +P+  +E           
Sbjct: 130 TLGAFSATTGRTLPDRYVEGTCPICGYKDARGDQCDQCGNQLDPIDLIEPRSKVDGSTPI 189

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
               E +   L A+ ++L ++ E+   +      R  V SF  + +KDL   S++R   D
Sbjct: 190 FKKTEHFLLDLPAFGEQLRTWIEAQEHW------RPNVRSFSLNFIKDLKPRSITRD-LD 242

Query: 216 WGIKIPDDPQYI------MYVWIDALTNYLTTT-GYLDN---PDGSKAKFW--PADLH-- 261
           WG+ IP  P+Y       +YVW DA+  YL+ +  + +N   PD  + ++W  P   H  
Sbjct: 243 WGVPIP-LPEYADRDDKRIYVWFDAVIGYLSASIEWAENRGTPDAWR-EWWQNPQARHYY 300

Query: 262 VIGKDILRFHAIYWPAFLLS-----------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +GKD + FH + WP  LL            A L LP  V S  F+  +G+K S S G V
Sbjct: 301 FMGKDNIVFHTVIWPGMLLGYGAGGHYGAGRAKLELPYNVVSSEFLTMEGKKFSSSRGVV 360

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +V+     DALRYFL       +D  +      +R N +L    GNLV+R+++ + 
Sbjct: 361 IYVNDVLSRYDADALRYFLAIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLTNVY 420

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++ G +P PG  + +D+++++     ++ + + +        L++ + L  +V+ Y   
Sbjct: 421 KNF-GSVPQPGDLSSADQALIAQVEAGIETVGKELDAARFKAGLSEAMRLAGQVNIYLSD 479

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Q+PW++ K + +RA+T+ Y  +  +  L IL   F+P  +  + + L
Sbjct: 480 QEPWKVIKQDRERAATIWYTALRCVDTLKILFTPFLPFSSQHLHEYL 526


>gi|298242482|ref|ZP_06966289.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555536|gb|EFH89400.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 558

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 250/555 (45%), Gaps = 58/555 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + +  A  Y     H+G      + AD  AR+HR+ G  VL  +G+DEHG  I   A+
Sbjct: 3   EHILVCVAWPYAKTSTHVGQVVGAYLPADTFARYHRMAGNQVLMVSGSDEHGTPILVDAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + FV +  +   ++ + L IS+D +  T  + H+   +  +  + DKG I+K  
Sbjct: 63  RQGISPREFVARYHQQICEVWERLGISWDLYTETGTENHYRITQDFFLTLYDKGYIFKDT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG--------------------QYYNAQHN 155
               Y   D  +  D  +        Y  A G                    +   ++ +
Sbjct: 123 MQSPYCPTDRRFLPDRYIEGTCPHCGYDSARGDQCDNCGKTLDPVDLIRPRCRLCGSKTS 182

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            ++  + E +F  L   Q+ L  +     E   P       ++++K GL+  +++R   D
Sbjct: 183 TLEMRQTEHFFLDLPKLQEPLAEWLNQGKEHWRP-NTLAFALNWIKEGLRARAITRD-LD 240

Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL------- 260
           WG+ IP    +D +  +YVW DA+  Y + +         P+  K  + P          
Sbjct: 241 WGVPIPIEGYEDKR--IYVWFDAVIGYFSASVEWAEKQGKPEAWKTWWVPGQTDPAVKAY 298

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + IGKD + FH I WPA LL   N  LP  V ++ F+   G K S S GNVI   +V+E 
Sbjct: 299 YFIGKDNIPFHTIIWPAMLLGYGNRNLPYDVPANEFMTMSGAKASSSRGNVIWTRDVLER 358

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY+L      G+D  +  D + +R N +L    GN V R+++ +   + G++P 
Sbjct: 359 YSADTLRYYLSATAPEGRDTDFTFDEMLRRNNDELVATYGNAVHRTLTFLQSKFGGVVPE 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P    E+D +IL+   R  +++  +++   +   L   + +    +RY D Q PW+  K 
Sbjct: 419 PRELNEADRAILAEVERGYKQVAHSIEQCHLKDGLQAAMVVARAANRYLDEQAPWKQIKV 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFM 498
           + + A T +YV ++V+  L IL   ++P  + K+ + L F  D ++  Q+  Q    G  
Sbjct: 479 DREAAGTTIYVMLQVLSALRILFCPYLPFSSQKLHEYLGFTGDVSK--QAWRQE---GVA 533

Query: 499 LHKTFD---PIFPRF 510
            + T     P+FP+ 
Sbjct: 534 ANATLPKPAPLFPKL 548


>gi|42523229|ref|NP_968609.1| methionyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|68565985|sp|Q6MMA3|SYM_BDEBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|39575434|emb|CAE79602.1| metG [Bdellovibrio bacteriovorus HD100]
          Length = 687

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 233/510 (45%), Gaps = 41/510 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K+ I+ A+ Y N   H+GH  E + AD  ARF  + G + +F    D HG  I  
Sbjct: 1   MNDKRKILITCALPYANGYIHLGHLVEYLQADFWARFQNMRGNECVFICADDTHGTPIMV 60

Query: 61  AAQNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  + Q+ + + +D AD   + +  F  T  + +   C   +KK+ +    
Sbjct: 61  KARELGITPEALIAQSYKEHTQDFAD-FQVQFSHFGSTNSEENRLLCEYFYKKMQEGNHT 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYN------AQHNPVQ---------- 158
                   Y   D+ +  D  V       GA  QY +      + ++P            
Sbjct: 120 RSQPIQQMYCNHDKMFLPDRFVKGTCPKCGAKEQYGDSCDVCASTYSPSDMKDVHCSLCG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E  FF+L+ ++  L  +   H       E   +++ +    LKDL +SR   
Sbjct: 180 TAPVMKDSESIFFKLNDFKQYLEEWIPKH----CSPEISKKMLEWFNEDLKDLDISRDEP 235

Query: 215 DWGIKIPD-DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW--PAD--LHVIGKDIL 268
            +G  IP  + +   YVW+DA   Y++TT       G   K  W  P+    H IGKDI 
Sbjct: 236 YFGFAIPGTNNKKFFYVWVDAPMGYMSTTEQWAKSQGKTLKDIWQDPSREIYHFIGKDIA 295

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           RFH I+WPAFL +A    P +VF HG ++  GEK+SKS G  I     +  +  + LRY+
Sbjct: 296 RFHTIFWPAFLKAAEFRSPNQVFVHGHLMVNGEKMSKSKGTFIAARTYLNHLNPEYLRYY 355

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +    RVN++L   I NL SR   M+ K  DG +  P A     
Sbjct: 356 YSTKLSSSVDDIDLNLEDFTNRVNSELVGKITNLGSRGGQMLKKKMDGKMSVPDA---EG 412

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           + ++    +  + I  + + +   +AL ++  L  + ++YFD + PW+  + +P+    V
Sbjct: 413 KKLIEHAQKTAESIAAHYEARDFAKALGEIRGLADDANKYFDEKAPWKTLEADPEGTKQV 472

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  T+ + R LAI L+  +P  + K+  +L
Sbjct: 473 ITTTLNMFRMLAIYLKPVLPFYSQKVAKLL 502


>gi|324114469|gb|EGC08438.1| methionyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 677

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   +EI E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEEIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|148656167|ref|YP_001276372.1| methionyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|187647763|sp|A5UUW9|SYM_ROSS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148568277|gb|ABQ90422.1| methionyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 592

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 252/526 (47%), Gaps = 65/526 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + ++ A  Y N   H+GH A   + ADV AR+ RL G  VL  +G+D HG  I  AA+
Sbjct: 3   DNILVAVAWPYANGPFHVGHIAGAYLPADVFARYQRLRGNRVLMVSGSDCHGTPITIAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  + +    F      L IS+D F +T    H+     ++ ++ + G +YK  
Sbjct: 63  REGITPQDVIRRYHPTFLKTFQTLGISFDLFTQTYTDNHYRVTTDIFLRLLENGYLYKET 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPVQ 158
             G YS     +  D  V        Y  A G Q     H                 PV 
Sbjct: 123 MVGSYSETLGRFLPDRFVEGTCPNCGYPRARGDQCDGCGHLHDPQDLIAPRSVLDGAPVT 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYES------HPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           + E E +F  L+  + +L ++ +S       P  +L  +      ++++ GL+  +++R 
Sbjct: 183 FRETEHFFLDLAKLEPQLRAWLDSVDRSYWRPNTLLFTQ------NWLREGLRGRAITRD 236

Query: 213 TFDWGIKIP-DDPQYI---MYVWIDALTNYLTTT---------------GYLDNPDGSKA 253
             +WG+ +P DDP +    +YVW DA+  Y + +                ++  PDGS  
Sbjct: 237 -LEWGVPVPVDDPTFKDKRIYVWFDAVIGYYSASIEWAQRSGAPDAWQEWWVCRPDGSS- 294

Query: 254 KFWPA-DLHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
              PA   + IGKD + FH I WPA L+   +L LP  V ++ F+  +G+K+S S    +
Sbjct: 295 ---PARSYYFIGKDNIPFHTIIWPAILIGYGDLALPYDVPANEFLNLEGDKMSTSRNWAL 351

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              E+ E    DA+RY+L+      +D  +      +RVN++L    GNL +R +S+  +
Sbjct: 352 WAPEIEERYQSDAIRYYLIANGPETRDSNWSWADFVQRVNSELVATWGNLANRVISLTHR 411

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++ G +P PGA  ++D  +++   +  +++   ++   +  AL + ++L    ++Y   Q
Sbjct: 412 NF-GAVPQPGALIDADRQLIAATQQAFEQVTTLLEGVKLRAALQEAMALAQTANQYLSDQ 470

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW+L K++ +RA+TVL+V +  +  L  L   F+P  + ++ ++L
Sbjct: 471 EPWKLVKSDQERAATVLFVALRTVDTLKTLFCPFLPFSSQRLHELL 516


>gi|271969811|ref|YP_003344007.1| tRNA synthetase class I (I, L, M and V) [Streptosporangium roseum
           DSM 43021]
 gi|270512986|gb|ACZ91264.1| tRNA synthetase class I (I, L, M and V) [Streptosporangium roseum
           DSM 43021]
          Length = 593

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 243/528 (46%), Gaps = 67/528 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I TA+A+P  N   HIGH     + +D+ +R+ R+ G  VL  +GTDEHG  I   A  
Sbjct: 4   HILTAVAWPYANGPRHIGHVSGFGVPSDMFSRYQRMVGNKVLMVSGTDEHGTPIQVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D+ +R   +    L +SYD F RTT   H+   + ++K + + G I+    
Sbjct: 64  EGVSARELADRYNRVIVEDLQALGLSYDLFTRTTTDNHYAVVQEIFKGLYENGYIFPKTT 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPVQ--------------W 159
            G  S        D  +        Y  A G Q  N   Q +P+Q              +
Sbjct: 124 MGAISPSTARTLPDRYIEGTCPICHYDSARGDQCDNCGNQLDPIQLINPVSKINGETPIF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A+ + L S+ +S        E R  V+ F  + L DL   ++SR   DW
Sbjct: 184 VETEHFMLDLPAFAEVLGSWLQSKQG-----EWRPNVLKFALNLLGDLQPRAMSRD-LDW 237

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPA----DLHVI 263
           G+ IP     D P   +YVW DA+  YL+ +        +PD  + ++W +      + +
Sbjct: 238 GVPIPLEGWSDQPNKRLYVWFDAVVGYLSASIEWARRSGDPDAWR-QWWQSPDARGYYFM 296

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FHA  WPA LL  N              L LP +V S  F+  +G K S S   
Sbjct: 297 GKDNIVFHAEIWPALLLGYNGQGSRDGKPGALGTLNLPSEVVSSEFLTMEGRKFSSSRQV 356

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + +     DALRY++       +D  +       R N +L    GNLV+RS+SM 
Sbjct: 357 VIYVRDFLARYDADALRYYIAVAGPESQDTDFTWSEFLNRNNGELVAAWGNLVNRSISMA 416

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++ G+IP  G  T++D ++L        +     +      A  +   ++ E +RY  
Sbjct: 417 AKNF-GVIPEAGELTDADRAMLERSRAAFAKAGAEFEASRFKNATNEAFEVIREANRYLA 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Q+PW++K  NP+R  ++L+V ++V+     LL   +P  +NKI+ +L
Sbjct: 476 EQEPWKIKD-NPERVKSILHVALQVVDDAKTLLTPVLPGSSNKIYAML 522


>gi|220980038|emb|CAP72230.1| Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase)
           (MetRS) [Escherichia coli LF82]
          Length = 677

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|283785919|ref|YP_003365784.1| Methionyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949373|emb|CBG88984.1| Methionyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 677

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 235/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             VT +  + + S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  LSVTPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSALIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+ +   L +  G  A F   W  D      H IGKDI+ F
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTASFDEYWKKDSSAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L  + +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAATVIGEAWESREFGKAIREIMALADQANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|1000351|gb|AAC44094.1| methionyl-tRNA synthetase [Mycoplasma pulmonis]
          Length = 281

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/282 (37%), Positives = 160/282 (56%), Gaps = 6/282 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ +YI+T I YP+   H+GH Y   IA VL  + ++ G +  F+TG+DEHGQKI   AQ
Sbjct: 2   KKTIYITTPIYYPSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              + T+ +VD+ +  F D     +I YD F RTT K H +  R ++ K+ +K  IY   
Sbjct: 62  ELKLETQDYVDRQANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +  + +  K  +  ++   ++ +  +EEE YFF L+ + D +  + +  
Sbjct: 122 YVGLYSVSDEEFLTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQ- 180

Query: 184 PEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            + I      NE+ S F+  GL++LS++R   DWG+KI    ++++YVW+DAL  YLT  
Sbjct: 181 -DIISSKAIVNELKSNFINKGLENLSVTRIKLDWGMKIDQSSKHVIYVWLDALFQYLTNL 239

Query: 243 GYLDNPDGSKAKFWP---ADLHVIGKDILRFHAIYWPAFLLS 281
           GY         KFW      +HV+GK+I RFH IYWP FL S
Sbjct: 240 GYGSKNQSLYEKFWKNGDERVHVVGKEITRFHCIYWPIFLKS 281


>gi|160897286|ref|YP_001562868.1| methionyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160362870|gb|ABX34483.1| methionyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 717

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 240/521 (46%), Gaps = 50/521 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 34  KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 93

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H   + +++ +   G I      
Sbjct: 94  GKTPQQFVADIAAGRKQYLDGFHIAFDNWHNTDAPENHVLAQQIYRDLKAAGFIETRTIE 153

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
            ++      +  D  +             G + +  +A + P   +              
Sbjct: 154 QFFDTEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSAVYAPTDLINPYSALSGAKPVLK 213

Query: 161 EEEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISF----------VKSGLKDLSL 209
             E +FF+LS  +  + L+ +    + + P E  N++  +             GL D  +
Sbjct: 214 SSEHFFFKLSDPRCVEFLTEWTQDGQHVQP-EVANKIKEWFGVRTNPDGTTSEGLGDWDI 272

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L +  G   + + AD      H IG
Sbjct: 273 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDRRGEDYEAYMADPTLEQYHFIG 332

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P K+  HGF+ ++ GEK+SKS G  +DP++ +  ++  
Sbjct: 333 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYLGLQMNP 392

Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  ++    +D  ++ D    RVN+DL     N+ SR+   I K +DG +   G
Sbjct: 393 EWLRYYLGAKLNGKNEDIDFNPDDFMARVNSDLIGKYVNIASRAAGFIAKRFDGKL---G 449

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             +E  +++L+      + + +  +N+   RA+ +++ L   V+ Y DA KPWEL K   
Sbjct: 450 TVSEDGQALLAQLRGQSEAVVQAFENRDTARAVREIMQLCDRVNEYVDANKPWELAKQEG 509

Query: 442 --DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              R   V    +E  R L I L+  +P +A ++   L VA
Sbjct: 510 MDARLQDVCTTCIEAFRLLTIYLKPILPAVAEQVEGFLNVA 550


>gi|150024169|ref|YP_001294995.1| methionyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|187647753|sp|A6GVQ2|SYM_FLAPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|149770710|emb|CAL42174.1| Methionine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 686

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 241/506 (47%), Gaps = 39/506 (7%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + +D+ +R+ RL G DV F  G+DEHG  I+  A+  G+
Sbjct: 10  ITAALPYTNGPIHIGHLAGVYMPSDIYSRYLRLQGKDVAFMCGSDEHGVAISMKAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  +D+     R       IS+D++ RT+ K HHDT    +KK+ DKGD  +      
Sbjct: 70  TPQEVIDKYDGIIRKSFVDFGISFDNYSRTSAKIHHDTASEFFKKLYDKGDFIEEVTEQL 129

Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWMEEEG------ 164
           Y  + + +  D  V     K  + + Y  Q              NP   +  E       
Sbjct: 130 YDAKADQFLADRFVVGTCPKCGNEEAYGDQCEKCGSTLNATDLINPKSTITGETPIMKST 189

Query: 165 --YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             +F  L  Y D L  +  E H     P     +V S++  GL+  +++R   DWGI +P
Sbjct: 190 KHWFLPLDRYSDFLTKWILEGHKSDWKP-NVYGQVKSWIDGGLEPRAVTRD-LDWGIDVP 247

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274
                   +YVW DA   Y++ T      +G   + +W  +    +H IGKD + FH I 
Sbjct: 248 VAGAEGKKLYVWFDAPIGYISATKEWAAREGKDWELYWKNEDTKLVHFIGKDNIVFHCII 307

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331
           +PA L +  +  LP  V ++ F+  +G K+S S    +   E +E+     D LRY L  
Sbjct: 308 FPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQDVLRYALTA 367

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + R N +LA   GN ++R V +  K Y+G++PTP  F+E DE+ L
Sbjct: 368 NAPESKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYEGVVPTPNKFSEVDEATL 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +        I  +++      AL +++++    ++Y   ++PW++ KT+P+R  T +YV 
Sbjct: 428 TELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKTDPERVKTQMYVA 487

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           +++   L +L + F+P  A K+  +L
Sbjct: 488 LQIATALRVLCEPFLPFTAEKLNKML 513


>gi|283832453|ref|ZP_06352194.1| methionine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072113|gb|EFE10222.1| methionine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 677

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 235/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + ++GL+   +SR +  +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFEAGLQQWDISRDSPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVL----AAELADPA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P LA ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLAERV 503


>gi|116754198|ref|YP_843316.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694646|sp|A0B7K2|SYM_METTP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116665649|gb|ABK14676.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 669

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 237/496 (47%), Gaps = 39/496 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + + + ++  + Y N   HIGH    + AD+  R  R  G DVLF  G+D HG  I   A
Sbjct: 4   DNDPILVTCGLPYANGPAHIGHLRTYVPADIFVRALRRMGHDVLFICGSDAHGTPIVVNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ G++ +  V+   ++F D+   +++ +D F  T +  +H   + + + + ++G +Y  
Sbjct: 64  ESRGMSPRELVEFYHKHFEDVFRSINVRFDYFGCTDDPSNHHRTQEIVRALMERGHVYPK 123

Query: 123 CYSGWYSLRDEAYYND----------------DEVYKGAD-----GQYYNA----QHNPV 157
                Y  R E +  D                DE  +G       G+  +A         
Sbjct: 124 EIELAYCPRCERFLPDRYVEGICPYCGVPARGDECDQGCGRHLEPGEIKDAVCKVCGTRA 183

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           ++ ++  YFFRLSA+++ LL Y +           RN  + +V+  LKD  ++R    WG
Sbjct: 184 EYRKQTHYFFRLSAFREFLLDYLQ---RLGGTASARNYALEWVRQELKDWCITR-NMSWG 239

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD---LHVIGKDILRFHAI 273
           +K P     ++YVW+DA   Y++ T       G    ++W      +H IG DI+  H I
Sbjct: 240 VKFPGSEDLVVYVWVDAPIGYISFTEEWCKAHGVPWERYWRGKSRIIHFIGGDIVYHHCI 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVR 331
           +WPA L  A   LP  V + G +    +K SKS G V+   +   + G+  D LRY+L  
Sbjct: 300 FWPAMLEGAGYTLPSDVVASGMLKIDDKKFSKSRGYVVWVKDDYLDQGLEPDYLRYYLAS 359

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  K+  +    L+++VN +L    GN ++R+V+  +K++DG +P      E D  ++
Sbjct: 360 YTSHTKEVNFSWKILQEKVNTELVGAFGNFLNRAVTFAVKNFDGKVPE----GELDPEVM 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                 + ++  ++      RA   V+SL    + YF + +PW+L +++   A +VL   
Sbjct: 416 KRIEMSVGDVSSSLMEYEFKRASDAVLSLADYANTYFQSHEPWKLIRSDRRAAGSVLRNC 475

Query: 452 VEVIRQLAILLQAFVP 467
           +++++ + IL++ F+P
Sbjct: 476 LQMVKAMIILMEPFMP 491


>gi|332092688|gb|EGI97758.1| methionyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 677

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L I L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMIYLKPVLPKLTER 502


>gi|45357889|ref|NP_987446.1| methionyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|68565983|sp|Q6M0E5|SYM_METMP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45047449|emb|CAF29882.1| Methionyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 663

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 227/497 (45%), Gaps = 50/497 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++TA+AY N   H+GHA    I AD+  R+ +L G +V+   GTD HG  I   A+  GV
Sbjct: 5   VTTALAYTNGPLHLGHARSTYIPADIFTRYLKLKGEEVIHVGGTDNHGVPITLTAEKEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
                VD+     +   D L+I +D+F RT    H +T +  + K+ + G IY+     +
Sbjct: 65  KPIDIVDRYHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGYIYEKEIEQF 124

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME--------------EE 163
           Y  + + Y  D  V           +G   +       P + +                 
Sbjct: 125 YCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKRTT 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LSA QD L  Y E+ PE  +P   +N  + +++  L D  +SR    WG+ IP  
Sbjct: 185 HYFFKLSAMQDSLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPIPGC 240

Query: 224 PQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
              +MYVWI+A   Y++ T          +L+N D SK        H IGKDI   HA++
Sbjct: 241 DDQVMYVWIEAPIGYVSFTKQLGDIWKSYWLENTDDSKIS------HFIGKDITVHHAVF 294

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           WP  L       +P  V S G++  + +K+S S   V+   + +E    D LRYF +   
Sbjct: 295 WPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFVENFSSDYLRYFFMINA 354

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESIL 391
              +D  +  D  +KR+N +L + IGN   R++    + + G  P        + D+ ++
Sbjct: 355 PLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKF-GSTPIVDLNQLKDEDKKLI 413

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           S C    + +   ++      AL ++I L  E + YF    PW +K  N +R   V+Y  
Sbjct: 414 SKCDDTEKLVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPWAIK--NEERLKEVMYTC 471

Query: 452 VEVIRQLAILLQAFVPK 468
             V++ +  LL +F+P+
Sbjct: 472 SVVLKYIIYLLSSFMPE 488


>gi|150401049|ref|YP_001324815.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187647735|sp|A6UUN1|SYM_META3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150013752|gb|ABR56203.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 672

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 234/515 (45%), Gaps = 55/515 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD++ R+ +L G DV+   GTD HG  I   A+ 
Sbjct: 4   KYLLTTALAYTNGPLHLGHARSTYIPADIIKRYLKLKGNDVIHVGGTDNHGVPITLTAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  V++     +   D L + +D + +T    H    +  +KK+ + G IY+   
Sbjct: 64  EGVKPEDIVNKYHNEIKRDLDNLSVEFDSYGKTHSDTHIQNAQEFYKKLKENGYIYEKEI 123

Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPV--------------QWM 160
             +Y    + +  D  V           +G   +       P               Q  
Sbjct: 124 EQFYCPDCDKFLADRYVEGSCPFCEGEARGDHCEVCGRHLEPTELVNPYCVICNATPQLK 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           +   YFF+LSA  D L +Y ++     +P   +N   S+++  L D  +SR    WG+ I
Sbjct: 184 KTTHYFFKLSALSDNLDNYVKNSN---MPDHIKNMAYSWIRE-LHDWDISR-GIKWGVPI 238

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDN-------------PDGSKAKFWPADLHVIGKDI 267
           PDD   +MYVW++A   Y++ T  + +              +    K W    H IGKDI
Sbjct: 239 PDDENQVMYVWLEAPIGYISFTKMMGDIWKEYWLKNNDNNTENQNTKIW----HFIGKDI 294

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              HA++WP  LL      LP  +FS G++  +G+K+S S   V+   + I+    D LR
Sbjct: 295 TVHHAVFWPGMLLGHGEYNLPNSIFSGGYLTLEGKKMSTSKKWVVWVDDFIKYFDSDYLR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGA 382
           YFL+      +D  +  D  +KR+N +L   I N   R++    + + G +P        
Sbjct: 355 YFLMANAPLNRDCDFSFDEFQKRINTELIAIIANFTHRALVFSHRKF-GALPVIDKPEEE 413

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             + D ++L  CS  +++  +NM +  +  AL  +I L  E + YF   +PW +   N  
Sbjct: 414 LNKEDLALLDKCSETIEKYNKNMMDCNLKDALVDIIHLAKEGNNYFQKMEPWTVDDEN-- 471

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R   +++V   + + +A LL  F+P   N++ D++
Sbjct: 472 RLKQIMFVCGVITKHIAYLLYPFMPNKTNELLDLM 506


>gi|91775274|ref|YP_545030.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91775418|ref|YP_545174.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123451971|sp|Q1H2F4|SYM_METFK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91709261|gb|ABE49189.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91709405|gb|ABE49333.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 692

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 250/541 (46%), Gaps = 61/541 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL +++A+ Y N   H+GH  E + +D+  RF ++ G  V +    D HG  I   A+  
Sbjct: 18  KLLVTSALPYANGSIHLGHMVEYVQSDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 77

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + + ++ ++ D +D L +++D++  T  + + +    +++ +   G I     
Sbjct: 78  GITPEELIRRVHAEHYADFSDFL-VAFDNYYSTNSEENRELASQIYRALKANGKIATRTI 136

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------------ 160
             +Y      +   D   KG      A  QY ++       ++P + +            
Sbjct: 137 EQYYDPVKHMFL-PDRFIKGECPKCHAKDQYGDSCESCGTTYSPTELIAPYSAVSGAAPV 195

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+LS  +D L  +  S     L  E  N++  +  SGL D  +SR    +G 
Sbjct: 196 RKETEHYFFKLSECEDFLRQWTRSG---TLQPEAANKMGEWFASGLSDWDISRDAPYFGF 252

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   Y+ +   L   +G    ++W  D      H IGKDIL FHA
Sbjct: 253 EIPDAPGKYFYVWLDAPIGYMASFKDLATREGLDFDEYWKPDSQAELYHFIGKDILYFHA 312

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331
           ++WPA L  +    P KVF+HGF+   GEK+SKS G  I     ++ V   + LRY+   
Sbjct: 313 LFWPATLKFSGYRQPTKVFAHGFLTVNGEKMSKSRGTFITARSYLDHVKNPEYLRYYYAA 372

Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D   + +    RVN+DL     N+ SR+   I K +DG + T G     + ++
Sbjct: 373 KLNGSMEDIDLNLEDFVARVNSDLVGKYVNIASRTAGFIAKRFDGKLGTVG-----ENAV 427

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
           ++        IRE+ +N+   RA+  +++L  + + Y     PW++ K     A+   V 
Sbjct: 428 IAELRAAADSIRESFENRDTARAVRDIMALADKANAYVAEHAPWDMAKQPEQTAALHAVC 487

Query: 449 YVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENR---------CFQSLDQRLK 494
            V +E+ R L + L+  +P LA  +      D L  AD +R          +Q L  R+ 
Sbjct: 488 SVALEMFRLLTLYLKPVLPGLAQAVEKFLKIDPLTWADIDRPLPAGHQIQAYQHLITRID 547

Query: 495 P 495
           P
Sbjct: 548 P 548


>gi|300114645|ref|YP_003761220.1| methionyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540582|gb|ADJ28899.1| methionyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 674

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 53/507 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF R+ G +  +    D HG  I   AQ  
Sbjct: 4   RILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMRGHECYYVCADDAHGTPIMLRAQQE 63

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++Q S+  + D AD   IS+D +  T    +      ++ +  DKG I     
Sbjct: 64  GITPETLIEQCSQEHQADFAD-FAISFDSYYSTHSAENRALSETIYLRNRDKGHITTRIV 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQW-------------- 159
              Y    E +  D  +             G + +   A ++P +               
Sbjct: 123 RQAYDPIREMFLPDRFIRGTCPRCNALDQYGDNCEVCGATYSPTELKEAISVLSGTPPIE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS ++  L  + +      L  E  N++  + ++GL+D  +SR    +G  
Sbjct: 183 RESEHYFFKLSDFEPLLKRWTQGGH---LQSEMANKLNEWFEAGLQDWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLHVIGKDILR 269
           IPD      YVW+DA   YL +  +L + +G          S A+ +    H IGKDIL 
Sbjct: 240 IPDSTDKYFYVWLDAPIGYLASFKHLCDREGLDFDAFMAPDSTAELY----HFIGKDILY 295

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A   LP  +F+HGF+   G+K+SKS G  I     +  +  + LRY+ 
Sbjct: 296 FHALFWPAMLHGAGFRLPTAIFAHGFLTVNGQKMSKSRGTFIKARTYLNHLNPEYLRYYF 355

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++  G +D   + D    R+NADL   + N+ SR    I K +   +    A   ++E
Sbjct: 356 AAKLGSGIEDLDLNFDDFMARINADLVGKVVNIASRCAGFINKHFQNRL----ADRLAEE 411

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---AS 445
           S+    +   + + ++ +++    A+ ++++L  + +RY D Q+PW   K +P R     
Sbjct: 412 SLFQKFAAASEHLAQHYESREFGHAMREIMALADQANRYIDEQQPWVAIK-DPARKLEVQ 470

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            V  + + + RQL I L+  +P  A K
Sbjct: 471 EVCTLGLNLFRQLIIYLKPVLPVTAEK 497


>gi|315109299|gb|EFT81275.1| methionyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 601

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   D
Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+S
Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y
Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|293411862|ref|ZP_06654587.1| methionyl-tRNA synthetase [Escherichia coli B354]
 gi|291469417|gb|EFF11906.1| methionyl-tRNA synthetase [Escherichia coli B354]
          Length = 616

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 28  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 87

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 88  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 147

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 148 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 206

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 207 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 263

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 264 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 323

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 324 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 383

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 384 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 439

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 440 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 499

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 500 CSMGINLFRVLMTYLKPVLPKLTER 524


>gi|32491285|ref|NP_871539.1| methionyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont
           of Glossina brevipalpis]
 gi|68566006|sp|Q8D219|SYM_WIGBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|25166492|dbj|BAC24682.1| metG [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 550

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 248/516 (48%), Gaps = 43/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ R+K+  + A  Y N   HIGH  E I AD+  RF+R+ G ++ F    D HG  I  
Sbjct: 1   MQNRKKILTTCAFPYANGSLHIGHILEHIQADIWVRFNRMIGNEIYFICADDSHGTPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   ++ +  V    +  ++     +ISYD++  T  K ++  C++++K +  K  I+
Sbjct: 61  KAKKNKISPEKMVFLFYKEHKNDLSKFNISYDNYYLTHSKENYRFCKLIYKLLKRKKLIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NPVQWMEE- 162
               S +Y  +   + +D  +        ++ QY +  +            NP+  + + 
Sbjct: 121 SKYISQFYDCKINMFLSDRLIQGKCPECNSEKQYSDNCNICGANYCSTDVINPISILSKS 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  +  FF L  ++  L  +  S    +L  E   +V  + K+GLK   +SR    
Sbjct: 181 VPIIKKSKHLFFDLPKFEKFLKKWIHSG---VLKKENLRKVSEWFKNGLKPWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDIL 268
           +G KIP++ +   YVW+DA   YL+T   L +       ++FW  +        IGKD++
Sbjct: 238 FGFKIPNEKEKYFYVWLDAPIGYLSTFKNLCDKKEKIFFSEFWDVNSKSEIYQFIGKDVI 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L   NL  P K+F HG +   GEK+SKS G VI     ++    D LRY+
Sbjct: 298 YFHSLFWPAILHGINLKKPTKLFVHGHVTLNGEKMSKSNGFVIKAKTYLKYCDSDFLRYY 357

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +I +C KD  +       +VN+++ N I NL SRS S I K ++G +    ++   +
Sbjct: 358 FSMKISSCAKDIDFSLSDFMNKVNSNIINKIVNLASRSSSFIDKYFEGYL----SYKIEN 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +    + + ++I +  Q+  I   + ++I L    ++YF+ + PW+L + + D+ + +
Sbjct: 414 YELYCKFTSLKEKINKYFQSNNISFIIYEIIKLAELANQYFNKKSPWKLTEESKDKRNKL 473

Query: 448 LYVT---VEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++   + +   + I L+  +P L+ K  D L ++
Sbjct: 474 HEISSMGINMFYIIMIYLKPILPNLSKKTEDFLNIS 509


>gi|289424927|ref|ZP_06426706.1| methionine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289427634|ref|ZP_06429346.1| methionine--tRNA ligase [Propionibacterium acnes J165]
 gi|295131252|ref|YP_003581915.1| methionine--tRNA ligase [Propionibacterium acnes SK137]
 gi|289154626|gb|EFD03312.1| methionine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289159125|gb|EFD07317.1| methionine--tRNA ligase [Propionibacterium acnes J165]
 gi|291377079|gb|ADE00934.1| methionine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313763264|gb|EFS34628.1| methionyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313773242|gb|EFS39208.1| methionyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313801126|gb|EFS42392.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313808697|gb|EFS47151.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313812158|gb|EFS49872.1| methionyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313817877|gb|EFS55591.1| methionyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313819790|gb|EFS57504.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823448|gb|EFS61162.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313824921|gb|EFS62635.1| methionyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313830175|gb|EFS67889.1| methionyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833098|gb|EFS70812.1| methionyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314919474|gb|EFS83305.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925899|gb|EFS89730.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314960728|gb|EFT04829.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314963400|gb|EFT07500.1| methionyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314968947|gb|EFT13045.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314979438|gb|EFT23532.1| methionyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314984228|gb|EFT28320.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315077250|gb|EFT49312.1| methionyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315083259|gb|EFT55235.1| methionyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315096776|gb|EFT68752.1| methionyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315097846|gb|EFT69822.1| methionyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100751|gb|EFT72727.1| methionyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327325498|gb|EGE67301.1| methionine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327449504|gb|EGE96158.1| methionyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327451674|gb|EGE98328.1| methionyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327452137|gb|EGE98791.1| methionyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328752392|gb|EGF66008.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 601

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   D
Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+S
Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y
Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|314930233|gb|EFS94064.1| methionyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
          Length = 601

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   D
Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+S
Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y
Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDTAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|159036379|ref|YP_001535632.1| methionyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|187647766|sp|A8M218|SYM_SALAI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157915214|gb|ABV96641.1| methionyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 600

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 240/532 (45%), Gaps = 68/532 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 3   HVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMTGHDVLMVSGTDEHGTPIQVQADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R        L +SYD F RTT + H+   + L++ +   G I     
Sbjct: 63  EGVTPRELADRYNRVIVADLHGLGLSYDLFTRTTTRNHYAVVQELFEGMYRNGYIVPKTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159
            G  S        D  +        Y+ A G   ++   Q +P+              ++
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGYESARGDQCDSCGNQLDPIDLRNPKSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           +E E +F  L A    L  + ++   +      R  V+ F K+ L DL     T D  WG
Sbjct: 183 IETEHFFLDLPALAGVLRQWLDTREGW------RPNVLRFSKNLLDDLQPRAITRDLEWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD--------LH 261
           + IP     D     +YVW DA+  YL+ +       G      ++W AD         +
Sbjct: 237 VPIPLEGWRDRGDKRIYVWFDAVIGYLSASIEWARRSGDPEAWRRWWSADGQGKDAPGYY 296

Query: 262 VIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSL 307
            +GKD + FH++ WPA L                  + LP +V S  F+  +G K S S 
Sbjct: 297 FMGKDNIVFHSVIWPALLAGYSGEGSRDGQPGELGRMNLPTEVVSSEFLTMEGRKFSSSR 356

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+RS+S
Sbjct: 357 RVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSIS 416

Query: 368 MILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           M  K++  + P  P   TE+DE++L+V       + E +      +A+ + + +V+E +R
Sbjct: 417 MAAKNFGAIPPVDPAGLTEADEALLAVARAGFGAVGELIGRHRQKQAIGEAMKVVAEANR 476

Query: 427 YFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y   Q PW+LK + +  R  T+L+V ++V+     LL  F+P  A KI ++L
Sbjct: 477 YLSEQAPWKLKSEADRPRMGTILHVALQVVSDANTLLTPFLPHSAQKIHELL 528


>gi|302865243|ref|YP_003833880.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568102|gb|ADL44304.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 600

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 242/533 (45%), Gaps = 70/533 (13%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 3   HVLAAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R   +    L +SYD F RTT + H+   + L+  +   G I     
Sbjct: 63  EGVTPRELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFTGLHRNGYIVPKVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159
           +G  S        D  +        Y  A G   +    Q +P+              ++
Sbjct: 123 TGAISPSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPIDLIDPKSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           +E E +F  L A  D L  + ++   +      R  V+ F ++ L DL     T D  WG
Sbjct: 183 VETEHFFLDLPALADALRQWLDTRDGW------RPNVLRFSRNLLDDLQPRAITRDLEWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD--------L 260
           + IP     D P   +YVW DA+  YL+ +        +P+  + K+W AD         
Sbjct: 237 VPIPLDDWRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWR-KWWSADGEGKDARSY 295

Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306
           + +GKD + FH++ WPA L                  L LP +V S  ++  +G K S S
Sbjct: 296 YFMGKDNIVFHSVIWPALLGGYSGEGARDGEPGELGRLNLPTEVVSSEYLTMEGRKFSSS 355

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
              VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+RSV
Sbjct: 356 RKVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSV 415

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           SM  K++  + P  P   TE+D+++L+        + + +      +A+ + + +V+E +
Sbjct: 416 SMAAKNFGAIPPVDPAGLTEADQALLATAKAGFGVVGDLIARHRQKQAIGEAMKVVAEAN 475

Query: 426 RYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y   Q PW+LK  +   R  TVL+V ++V+     LL  F+P  A KI ++L
Sbjct: 476 KYLSEQAPWKLKGEDEKPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHELL 528


>gi|149371072|ref|ZP_01890667.1| methionyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355858|gb|EDM44416.1| methionyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 690

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 239/516 (46%), Gaps = 37/516 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M++ ++  I+ A+ Y N   HIGH A   + AD+ ARF RL G DV F  G+DEHG  I 
Sbjct: 1   MQDPKRYTITAALPYTNGPVHIGHLAGVYVPADIYARFQRLQGKDVAFVCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+     +   +   +S+D++ RT+ K HHDT    +KK+ D+G  
Sbjct: 61  IKAKKEGITPQQVVDKYHAIIKQSFEDFGVSFDNYSRTSAKVHHDTASDFFKKLYDEGKF 120

Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160
            +      Y    + +  D           +E   G   +     HN    +        
Sbjct: 121 IEEVTEQLYDAEADQFLADRFVIGTCPKCGNEESYGDQCEACGTSHNATDLINPKSAITG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L  Y+  L  +     +         +  S++  GL+  +++R   
Sbjct: 181 AVPTLKETKHWFLPLDQYEPFLKEWILKEHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T      +G     +W +D    LH IGKD 
Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISATKEWAEKEGKDWEPYWKSDDTKLLHFIGKDN 299

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +     +P  V ++ F+  +G KIS S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPSMLKADGTYIMPDNVPANEFLNLEGNKISTSKNWAVWLHEYLEDFPGQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R   +  K YDG++P P AF+
Sbjct: 360 LRYTLTANAPETKDNDFTWADFQARNNNELVAIFGNFINRVTVLTHKYYDGVVPAPAAFS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + DE  L+        I  +++      A  +++++    ++Y   ++PW+  K + +R 
Sbjct: 420 DVDEQTLTELKTYPAVIESSIERYRFREAQQELMNVARLGNKYLADEEPWKTIKVDEERT 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            T++YV +++   LA+L + F+P  + K+ ++L V+
Sbjct: 480 KTIMYVALQIANALAVLSEPFLPFTSTKLKNMLNVS 515


>gi|326798841|ref|YP_004316660.1| methionyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549605|gb|ADZ77990.1| Methionyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 688

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 248/527 (47%), Gaps = 48/527 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK+ ++  I++A+ Y N   HIGH A   I AD+  RF R++  +V F  G+DEHG  I 
Sbjct: 1   MKDFKRYTITSALPYANGPLHIGHLAGAYIPADIFVRFLRMNNKEVAFVCGSDEHGAAIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+ +   ++  +   IS+D + RT+ K HH+  +  +  + DKG+ 
Sbjct: 61  IKAKKEGITPQQIIDKYNAQIKESFEQFGISFDIYHRTSSKIHHELSQEFFLNLYDKGEF 120

Query: 120 YKGCYSGWYSLRDEAYYN--------------------DDEVYKGADGQYYNAQHNPVQW 159
            +     +Y   DE Y+                      D+  K           NP   
Sbjct: 121 VEKYSEQYY---DEEYHQFLADRYIVGTCPNCHNEGAYGDQCEKCGTSLSPTDLINPKST 177

Query: 160 M--------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           +        E + ++  L  YQ  L  +     + IL      +  S++KSGL+  S++R
Sbjct: 178 LSGKTPVLRETKHWYLPLDKYQAWLEKWLLEGKKDILKSNVYGQCSSWLKSGLQARSMTR 237

Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-----PAD---- 259
              DWG+ +P  +     +YVW+DA   Y++ T       G    K+W     PAD    
Sbjct: 238 D-LDWGVDVPLEEAKGKKLYVWLDAPIGYISATKQWALDTGKDWEKYWKKQENPADDACL 296

Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +H IGKD + FH I +P+ L +     LP+ + ++ F+  +G+K+S S  + +   E + 
Sbjct: 297 IHFIGKDNIVFHCIIFPSILHAHGEYVLPENIPANEFLNLEGDKLSTSRNHAVWLHEYLA 356

Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +     D LRY L   +    D  +     + RVN +L    GN ++R + +  K +DG 
Sbjct: 357 DFPGKQDELRYVLTSILPETSDSEFTWKDFQARVNNELVAIFGNFINRVLVLSHKYFDGK 416

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +   G  ++ D+ +LS   R  + I  ++       ALA  +++    ++Y   ++PW+L
Sbjct: 417 VKAAGELSDKDKLVLSELERYPKTISSSLSQYRFREALAHFMNVARLGNKYLADEEPWKL 476

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            KT+ DR  TVL + +++   LA+L Q F+P  A K+F +L   D +
Sbjct: 477 IKTDEDRVKTVLNIGLQIAANLAVLAQPFLPHTAEKLFQMLNFQDRD 523


>gi|270346539|pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2
          Length = 547

 Score =  193 bits (491), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 5   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 65  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 125 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 183

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 184 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 241 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 301 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 417 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 477 CSMGINLFRVLMTYLKPVLPKLTER 501


>gi|315501788|ref|YP_004080675.1| methionyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315408407|gb|ADU06524.1| methionyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 600

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 241/533 (45%), Gaps = 70/533 (13%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 3   HVLAAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R   +    L +SYD F RTT + H+   + L+  +   G I     
Sbjct: 63  EGVTPRELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFTGLHRNGYIVPKVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159
            G  S        D  +        Y  A G   +    Q +P+              ++
Sbjct: 123 IGAISPSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPIDLIDPKSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           +E E +F  L A  D L  + ++   +      R  V+ F ++ L DL     T D  WG
Sbjct: 183 VETEHFFLDLPALADALRQWLDTRDGW------RPNVLRFSRNLLDDLQPRAITRDLEWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD--------L 260
           + IP     D P   +YVW DA+  YL+ +        +P+  + K+W AD         
Sbjct: 237 VPIPLDDWRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWR-KWWSADGEGKDARSY 295

Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306
           + +GKD + FH++ WPA L                  L LP +V S  ++  +G K S S
Sbjct: 296 YFMGKDNIVFHSVIWPALLGGYSGEGARDGEPGELGRLNLPTEVVSSEYLTMEGRKFSSS 355

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
              VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+RSV
Sbjct: 356 RKVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSV 415

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           SM  K++  + P  P   TE+D+++L +       + + +      +A+ + + +V+E +
Sbjct: 416 SMAAKNFGAIPPVDPAGLTEADQALLDIAKAGFATVGDLIARHRQKQAIGEAMKVVAEAN 475

Query: 426 RYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y   Q PW+LK  +   R  TVL+V ++V+     LL  F+P  A KI ++L
Sbjct: 476 KYLSEQAPWKLKGEDEKPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHELL 528


>gi|323187874|gb|EFZ73170.1| methionyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 677

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|6730520|pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli
          Length = 551

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 5   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 65  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 125 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 183

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 184 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 241 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 301 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D +
Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 417 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQAGRDADLQAI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 477 CSMGINLFRVLMTYLKPVLPKLTER 501


>gi|319795385|ref|YP_004157025.1| methionyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597848|gb|ADU38914.1| methionyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 700

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 241/526 (45%), Gaps = 68/526 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N + HIGH  E I AD+  R  R++G +V F    D HG  I  
Sbjct: 1   MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--- 117
           AA  AGVT + FV + +   +   D   IS+D++  T    +H   + +++ +   G   
Sbjct: 61  AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE 120

Query: 118 --------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160
                   D  KG +     ++ E      +   G + +   A + P + +         
Sbjct: 121 TKSVEQFYDPEKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGA 180

Query: 161 -----EEEGYFFRLSAYQ-DKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLS 208
                  + +FF+LS  + +  L  + + P  +   E +N++  ++      K GL D  
Sbjct: 181 KPELRSSDHFFFKLSDPRCEAYLKEWTAAPGHVQS-EVQNKIREWLYKDDEGKGGLGDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-------------------TGYLDNPD 249
           +SR    +GI+IPD P    YVW+DA   YL +                   T Y+ +PD
Sbjct: 240 ISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPD 299

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
             +       +H IGKDI+ FH ++WPA L  +    P  V+ HG +   GEK+SKS G 
Sbjct: 300 LEQ-------VHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGT 352

Query: 310 VIDPIEVIEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            IDP++ +  +G+D   LRY++  ++    +D  ++ +    RVN+DL     N+ SR+ 
Sbjct: 353 GIDPLKYL-SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAA 411

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +   G  +   +++L        +I      +   RAL +V++L  +V+ 
Sbjct: 412 GFIGKRFGGKL---GEVSADGDALLFALREAAGQIHSLYDGRDYARALREVMALADKVNE 468

Query: 427 YFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           Y D  KPWEL  K+    R   V  V +E  R L + L+  +P LA
Sbjct: 469 YVDQNKPWELAKKEGAEARLHDVCTVCIEAFRLLTLYLKPVLPALA 514


>gi|13786940|pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase
           Complexed With Methionine
          Length = 551

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|319442718|ref|ZP_07991874.1| methionyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 621

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 158/539 (29%), Positives = 256/539 (47%), Gaps = 77/539 (14%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ T++A+P  N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   AQ 
Sbjct: 4   HVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGNEVLMVSGTDEHGTPLLVQAQK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +   D+ +R   +    L +SYD F RTT + H+   + L++ ++D G + +   
Sbjct: 64  EGVPVQELADRYNRIIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFRGLNDNGYMIRQTT 123

Query: 125 SG------WYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQ--------------W 159
            G        +L D        +    D +         Q +P                +
Sbjct: 124 VGAIDPKTGRTLPDRFIEGTCPICGATDARGDQCDNCGNQLDPADLIDPRSKIDGATPDF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
           +E E +   L A+ + L  +  +   +      R  V++F  + LKD+   ++SR   DW
Sbjct: 184 VETEHFMLDLPAFAEALEKWLSTREGW------RPNVLNFSLNLLKDMRPRAMSRD-IDW 236

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW--PADL--HVIG 264
           G+ +P     D+    +YVW DA+  YL+ +       G K    K+W  P  L  + +G
Sbjct: 237 GVPVPIEGWQDNEAKKLYVWFDAVVGYLSASIEWAWRTGDKDAWKKWWSDPEALSYYFMG 296

Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA LL                 L LP +V S  F+   G K S S G V
Sbjct: 297 KDNITFHSQIWPAELLGYAGNGAKGGEAGEYGELNLPTEVVSSEFLTMSGSKFSSSKGVV 356

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + ++E G DALRYF+        D  +  D   +R+N +LAN  GNLV+R+VSM  
Sbjct: 357 IYVRDFLQEFGPDALRYFIAVAGPENMDTDFTWDEFVRRINTELANEWGNLVNRTVSMAH 416

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++ G IPTPG FT  D+++L   +     + E +++      +++ + +V+  ++Y  A
Sbjct: 417 KNF-GEIPTPGEFTAEDQALLDESAAAFGIVGEYLEHSRFKAGISEAMRIVARANQYIAA 475

Query: 431 QKPWELKK---------TNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Q+PW+L K          +P   +R STVL+  ++V+     LL  ++P  A KIF++L
Sbjct: 476 QEPWKLAKAAKGTEDTAADPAARERLSTVLFTALQVVADANTLLTPYLPFSAQKIFELL 534


>gi|330013408|ref|ZP_08307631.1| methionine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328533523|gb|EGF60248.1| methionine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 670

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 187

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E   ++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLAAR 505


>gi|46015192|pdb|1P7P|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionine Phosphonate
 gi|46015201|pdb|1PFU|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionine Phosphinate
 gi|46015202|pdb|1PFV|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Difluoromethionine
 gi|46015203|pdb|1PFW|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Trifluoromethionine
 gi|46015204|pdb|1PFY|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionyl Sulphamoyl Adenosine
 gi|46015205|pdb|1PG0|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methioninyl Adenylate
 gi|46015206|pdb|1PG2|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionine And Adenosine
          Length = 551

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 5   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 65  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 125 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 183

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 184 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 241 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 301 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 417 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 477 CSMGINLFRVLMTYLKPVLPKLTER 501


>gi|262040134|ref|ZP_06013387.1| methionine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042487|gb|EEW43505.1| methionine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 680

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 235/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +  +A ++P + +            
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPV 187

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E   ++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLAAR 505


>gi|191169956|ref|ZP_03031510.1| methionyl tRNA synthetase [Escherichia coli F11]
 gi|187649788|sp|Q0TFX8|SYM_ECOL5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|190909472|gb|EDV69057.1| methionyl tRNA synthetase [Escherichia coli F11]
          Length = 677

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|82543475|ref|YP_407422.1| methionyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123728409|sp|Q323B4|SYM_SHIBS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81244886|gb|ABB65594.1| methionine tRNA synthetase [Shigella boydii Sb227]
 gi|332097116|gb|EGJ02099.1| methionyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 677

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQESRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|218559033|ref|YP_002391946.1| methionyl-tRNA synthetase [Escherichia coli S88]
 gi|30173163|sp|Q8FFX8|SYM_ECOL6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649787|sp|A1ACX8|SYM_ECOK1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649789|sp|Q1R9V8|SYM_ECOUT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695277|sp|B7MEG9|SYM_ECO45 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218365802|emb|CAR03542.1| methionyl-tRNA synthetase [Escherichia coli S88]
 gi|294491472|gb|ADE90228.1| methionyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307626341|gb|ADN70645.1| methionyl-tRNA synthetase [Escherichia coli UM146]
 gi|323951909|gb|EGB47783.1| methionyl-tRNA synthetase [Escherichia coli H252]
 gi|323956148|gb|EGB51900.1| methionyl-tRNA synthetase [Escherichia coli H263]
          Length = 677

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|238062568|ref|ZP_04607277.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237884379|gb|EEP73207.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 603

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 242/533 (45%), Gaps = 70/533 (13%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 6   HVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMAGHDVLMVSGTDEHGTPIQVQADA 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R   +    L +SYD F RTT + H+   + L+  +   G I     
Sbjct: 66  EGVTPRELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFSGLHRNGYIVPKVT 125

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QW 159
           +G  S        D  +        Y  A G Q  N   Q +PV              ++
Sbjct: 126 TGAISPSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPVDLINPKSKINGETPEF 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           +E E +F  L A  D L  + +    +      R  V+ F ++ L DL     T D  WG
Sbjct: 186 VETEHFFLDLPALADALRRWLDGREGW------RPNVLRFSRNLLDDLQPRAITRDLEWG 239

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL-------- 260
           + IP     D P   +YVW DA+  YL+ +        +P+  + ++W  D         
Sbjct: 240 VPIPLDGWRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWR-RWWSVDAEGKDALSY 298

Query: 261 HVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKS 306
           + +GKD + FH++ WPA L                  L LP +V S  ++  +G K S S
Sbjct: 299 YFMGKDNIVFHSVIWPALLGGYSGAGDRDGEPGALGRLNLPTEVVSSEYLTMEGRKFSSS 358

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
              VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+RSV
Sbjct: 359 RKVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSV 418

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           SM  K++  + P  P   TE+DE++L+        + + +      +A+ + + +V+E +
Sbjct: 419 SMAAKNFGAIPPVDPAGLTEADEALLATARVGFDTVGDLIGRHRQKQAIGEAMRVVAEAN 478

Query: 426 RYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y   Q PW+LK+  +  R  T+L+V ++V+     LL  F+P  A +I ++L
Sbjct: 479 KYLSEQAPWKLKEPADKPRMGTILHVALQVVSDANTLLTPFLPHSAQQIHELL 531


>gi|237748784|ref|ZP_04579264.1| methionyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380146|gb|EEO30237.1| methionyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 695

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 248/528 (46%), Gaps = 73/528 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL---DG--LDVLFTTGTDEHGQKIAK 60
           KL+++TA+ Y NA  HIGH  E I AD+  RF R+   DG   +V F    D HG  I  
Sbjct: 4   KLFVTTALPYANAPFHIGHIMEYIQADIWVRFQRMQKDDGKQREVHFVGADDVHGAPIMI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV + +   +   +   IS+D++  T    +++  R +++++  KG I 
Sbjct: 64  AAEKAGKTPQEFVAEIAAGRKAPLNGFLISFDNWHSTDGPENYELSREIYRRLKAKGLIV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM--- 160
                 ++    E +  D     E  K GA  QY +               NP   +   
Sbjct: 124 SRTIEQFFDPVKEMFLPDRYIKGECPKCGAKDQYGDTCEVCSTVYAPTELKNPYSILTGA 183

Query: 161 -----EEEGYFFRLSAYQ------DKLLSYYESHPEFILPIERRNEVISFVK------SG 203
                + E +FFRLS  Q      +  L     HP   L  E  N+   +++      + 
Sbjct: 184 TPVMKQSEHFFFRLSDPQCTEFLKEWTLGKVNGHPR--LQPEVANKAREWLQGKDGEENA 241

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA-------LTNYLTTTG-----YLDNPDGS 251
           L D  +SR    +GI+IPD P    YVW+DA       L NY + TG     ++ +P+  
Sbjct: 242 LSDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNYFSKTGGDYDAFMADPETE 301

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +        H IGKDI+ FH ++WPA L  A++ +P  V+ HGFI   GEK+SKS G  I
Sbjct: 302 Q-------YHFIGKDIIYFHTLFWPAMLHFADMRVPNNVYVHGFITVGGEKMSKSRGTGI 354

Query: 312 DPIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            P+  + ++G++   LRY+L  +++   +D  +  +    RVNADL     N+ SR+   
Sbjct: 355 SPLRYL-DIGMNPEWLRYYLAAKLSDRVEDLDFTGEDFIARVNADLIGKYVNIASRAAGF 413

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           I K + G +    A    D  IL        EI E  + +   +AL Q++ L  EV+ Y 
Sbjct: 414 ITKRFGGKLAAGWAL--KDTPILDNLRAAAPEIAELYEAREFGKALRQIMHLADEVNAYV 471

Query: 429 DAQKPWELKKTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKI 473
           D  KPW L K +P++   +  V    +E  R L I L+  +P +A K+
Sbjct: 472 DEHKPWVLAK-DPEKTEELHQVCTRLLEAFRLLTIYLKPVLPAVAEKV 518


>gi|323934275|gb|EGB30697.1| methionyl-tRNA synthetase [Escherichia coli E1520]
          Length = 677

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|26248490|ref|NP_754530.1| methionyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91211401|ref|YP_541387.1| methionyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117624319|ref|YP_853232.1| methionyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|227887166|ref|ZP_04004971.1| methionyl-tRNA synthetase [Escherichia coli 83972]
 gi|237704573|ref|ZP_04535054.1| methionyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|300978881|ref|ZP_07174394.1| methionyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301048843|ref|ZP_07195839.1| methionyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|26108895|gb|AAN81098.1|AE016763_57 Methionyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072975|gb|ABE07856.1| methionyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115513443|gb|ABJ01518.1| methionyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|226900939|gb|EEH87198.1| methionyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227835516|gb|EEJ45982.1| methionyl-tRNA synthetase [Escherichia coli 83972]
 gi|300299357|gb|EFJ55742.1| methionyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300409514|gb|EFJ93052.1| methionyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307554183|gb|ADN46958.1| methionyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|315285705|gb|EFU45145.1| methionyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294365|gb|EFU53713.1| methionyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 680

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|215487336|ref|YP_002329767.1| methionyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312968928|ref|ZP_07783135.1| methionyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|254782861|sp|B7UFD1|SYM_ECO27 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|215265408|emb|CAS09808.1| methionyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312286330|gb|EFR14243.1| methionyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 677

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|153207562|ref|ZP_01946245.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212217981|ref|YP_002304768.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064875|sp|B6J4V8|SYM_COXB1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120576530|gb|EAX33154.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012243|gb|ACJ19623.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 546

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 243/547 (44%), Gaps = 52/547 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   A
Sbjct: 4   EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q  G+  +  V + +  + RD+   L I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 64  QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161
              S  Y    E +  D  +       GA  QY        A ++P + ++         
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L+ Y   L  + ++     L  +  N++  +    LK   +SR    +
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IP       YVW+DA   Y+ +   L    P  +   +W         H +GKDI+ 
Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L SA   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHALFWPAMLSSAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   +D   + D   +RVNADL     NL SR    I K++ G +       +  E
Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYE 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           S L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K     A    
Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475

Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504
             T  + + + L   L+  +P  A K+   L       C +     LK   + H    F+
Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529

Query: 505 PIFPRFL 511
           P+  R L
Sbjct: 530 PLMQRLL 536


>gi|324013836|gb|EGB83055.1| methionyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 676

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|124266353|ref|YP_001020357.1| methionyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|187647749|sp|A2SEY3|SYM_METPP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|124259128|gb|ABM94122.1| methionyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 697

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 162/562 (28%), Positives = 251/562 (44%), Gaps = 68/562 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L+++TA+ Y N   HIGH  E I AD+  RF R+ G  V F    D HG  I  AA+ A
Sbjct: 4   QLFVTTALPYANGHFHIGHIMEYIQADIWVRFQRMQGHAVHFVGADDAHGAPIMIAAEKA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H   +  ++ +   G I+     
Sbjct: 64  GKTPQQFVADIAAGRKPYLDGFHIAFDNWHSTDGPENHQLAQDTYRALRRNGLIFTREIE 123

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161
            ++      +  D     E  K GA  QY ++              NP   +        
Sbjct: 124 QFFDPVKAMFLPDRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSTLTGATPVMK 183

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERR----NEVISFVK----------SGLKD 206
             E +FF+LS+   + L + +       PI  +     EV++ +K           GL D
Sbjct: 184 TSEHHFFQLSS--PRCLDFLKDWTHGSAPISGQPRLQAEVLNKIKEWFATDEQGHGGLAD 241

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261
             +SR    +GI+IPD P    YVW+DA   YL +     +  G   + + AD     +H
Sbjct: 242 WDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDKQGLDFEAFMADPKTEQVH 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            IGKDI  FH ++WPA L  +    P  VF HGFI   GEK+SKS G  I P+  + E+G
Sbjct: 302 FIGKDITYFHTLFWPAMLHFSGRRTPDHVFVHGFITVSGEKMSKSRGTGISPLRYL-EIG 360

Query: 322 VDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           ++A  LRY++  ++    +D  ++ D    RVN+DL     N+ SR+   + K +DG + 
Sbjct: 361 MNAEWLRYYIAAKLNGRVEDVDFNPDDFVARVNSDLVGKYINIASRAAGFLSKRFDGRLT 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                     ++L        +I    +++   +AL + ++L   V+ Y DA KPWEL K
Sbjct: 421 A--ELPAESRTLLEGLQAARDDIARLYEDREYAKALREAMALADRVNEYVDANKPWELAK 478

Query: 439 TNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRC------ 485
                 R   V    +E  R L I L+  +P LA ++   L V     AD  R       
Sbjct: 479 QAGQDARLQQVCSTCIEAFRLLTIYLKPVLPALAAQVEGFLKVEPMRFADAGRLLGAHAI 538

Query: 486 --FQSLDQRLKPGFMLHKTFDP 505
             ++ L QR+ P  +L   F+P
Sbjct: 539 SEYKHLMQRVDPK-LLDALFEP 559


>gi|110642322|ref|YP_670052.1| methionyl-tRNA synthetase [Escherichia coli 536]
 gi|300981629|ref|ZP_07175615.1| methionyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|110343914|gb|ABG70151.1| methionyl-tRNA synthetase [Escherichia coli 536]
 gi|300307430|gb|EFJ61950.1| methionyl-tRNA synthetase [Escherichia coli MS 200-1]
          Length = 680

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|300948209|ref|ZP_07162332.1| methionyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300955139|ref|ZP_07167541.1| methionyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|331653541|ref|ZP_08354542.1| methionine--tRNA ligase [Escherichia coli M718]
 gi|405895|gb|AAA60526.1| methionyl-tRNA synthetase [Escherichia coli]
 gi|300317934|gb|EFJ67718.1| methionyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300452257|gb|EFK15877.1| methionyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|315136745|dbj|BAJ43904.1| methionyl-tRNA synthetase [Escherichia coli DH1]
 gi|323936728|gb|EGB33013.1| methionyl-tRNA synthetase [Escherichia coli E1520]
 gi|331048390|gb|EGI20466.1| methionine--tRNA ligase [Escherichia coli M718]
 gi|744213|prf||2014253G Met-tRNA synthetase
          Length = 680

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|16130052|ref|NP_416617.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108932|ref|AP_002712.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081738|ref|YP_001731058.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238901300|ref|YP_002927096.1| methionyl-tRNA synthetase [Escherichia coli BW2952]
 gi|135149|sp|P00959|SYM_ECOLI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710904|sp|B1X7K4|SYM_ECODH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|259511558|sp|C4ZSJ8|SYM_ECOBW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|42016|emb|CAA39315.1| methionine-tRNA ligase [Escherichia coli K-12]
 gi|146829|gb|AAA24161.1| methionyl-tRNA synthetase (metG) [Escherichia coli]
 gi|1788432|gb|AAC75175.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675229|dbj|BAE76592.1| methionyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169889573|gb|ACB03280.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238861758|gb|ACR63756.1| methionyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260448789|gb|ACX39211.1| methionyl-tRNA synthetase [Escherichia coli DH1]
 gi|323940818|gb|EGB37006.1| methionyl-tRNA synthetase [Escherichia coli E482]
          Length = 677

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|238895686|ref|YP_002920421.1| methionyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|288934383|ref|YP_003438442.1| methionyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238548003|dbj|BAH64354.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|288889112|gb|ADC57430.1| methionyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 680

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 187

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E   ++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLAAR 505


>gi|293410473|ref|ZP_06654049.1| methionyl-tRNA synthetase [Escherichia coli B354]
 gi|291470941|gb|EFF13425.1| methionyl-tRNA synthetase [Escherichia coli B354]
          Length = 591

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKARTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|152971099|ref|YP_001336208.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|290508587|ref|ZP_06547958.1| methionyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|187647731|sp|A6TBK7|SYM_KLEP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150955948|gb|ABR77978.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|289777981|gb|EFD85978.1| methionyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 677

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 234/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E   ++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 478 CTMGLNMFRVLMTWLKPVLPQLAAR 502


>gi|220935785|ref|YP_002514684.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997095|gb|ACL73697.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 680

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 224/509 (44%), Gaps = 41/509 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF R+ G   ++    D HG  I   A+  
Sbjct: 13  QILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMGGHRCIYVCADDAHGTPIMLKARAE 72

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  +++     R       +++D +  T    +     +++ ++ D G I +    
Sbjct: 73  GIEPEELIERIGHEHRADFAGFHVAFDQYHSTHSPENQHFAELIYTRLRDGGHIARRTIR 132

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM-------- 160
             Y  +   +  D     E  K GA  QY ++              NPV  +        
Sbjct: 133 QAYDPKAGMFLPDRFIKGECPKCGAADQYGDSCEACGATYAPTDLKNPVSAISGATPVEK 192

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E YFF+L+ ++  L  +  S     L  E RN++  + K+GL D  +SR    WG +I
Sbjct: 193 ESEHYFFKLADFEQFLREWTGSGS---LQPEIRNKLNEWFKAGLTDWDISRDAPYWGFEI 249

Query: 221 PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           PD P    YVW+DA   Y+ +   Y +        +W  D      H IGKDI  FH ++
Sbjct: 250 PDAPGKYFYVWLDAPIGYMASFKRYCEGHGLDFDAWWSPDSQAELYHFIGKDIAYFHTLF 309

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  A    P  VF HGF+   G+K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 310 WPAMLTGAGFRAPTAVFCHGFLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYYFAAKLG 369

Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            G D      D    RVN+DL   + N+ SR    I K ++G +    A +  D  +   
Sbjct: 370 SGVDDIDLSLDDFIARVNSDLVGKVVNIASRCAGFIHKRFNGQL----ADSLPDADLYQR 425

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVT 451
            +R   EI +  + +   +A+ ++++L    ++Y D  KPW L K     DR   V    
Sbjct: 426 FARSRDEIAKLFEAREFGQAMREIMALADVANQYIDEHKPWVLAKQEGMEDRVQAVCTQG 485

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + R L   L+  +P +A K    L VA
Sbjct: 486 LNLFRVLMTYLKPVLPAMAEKAEGFLNVA 514


>gi|301021168|ref|ZP_07185205.1| methionyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300398256|gb|EFJ81794.1| methionyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 680

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|218690179|ref|YP_002398391.1| methionyl-tRNA synthetase [Escherichia coli ED1a]
 gi|331658191|ref|ZP_08359153.1| methionine--tRNA ligase [Escherichia coli TA206]
 gi|254782866|sp|B7MX36|SYM_ECO81 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218427743|emb|CAR08652.2| methionyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222033877|emb|CAP76618.1| Methionyl-tRNA synthetase [Escherichia coli LF82]
 gi|281179206|dbj|BAI55536.1| methionyl-tRNA synthetase [Escherichia coli SE15]
 gi|312946734|gb|ADR27561.1| methionyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315299519|gb|EFU58770.1| methionyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|330911946|gb|EGH40456.1| methionyl-tRNA synthetase [Escherichia coli AA86]
 gi|331056439|gb|EGI28448.1| methionine--tRNA ligase [Escherichia coli TA206]
          Length = 677

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|134046374|ref|YP_001097859.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|187647746|sp|A4FZL1|SYM_METM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|132663999|gb|ABO35645.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 663

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 226/500 (45%), Gaps = 50/500 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL G +V+   GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVIHVGGTDNHGVPITLTAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L++S+D F RT    H +T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM-------------- 160
             +Y  + + Y  D  V           +G   +       P + +              
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE  +P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271
           P     +MYVWI+A   Y++ T          +L+N   SK        H IGKDI   H
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDLWKDYWLENTGDSKIS------HFIGKDITVHH 291

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A++WP  L       +P  V S G++  + +K+S S   V+   + IE    D LRYF +
Sbjct: 292 AVFWPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFM 351

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDE 388
                 +D  +  D  +KR+N +L + IGN   R++    + + G  P        + D+
Sbjct: 352 INAPLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKF-GSTPVVDLNQLKDEDK 410

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            ++S C   L  +   ++      AL ++I L  E + YF    PW +K  + +R   V+
Sbjct: 411 KLISKCEDTLNRVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPWAIK--DEERLKEVM 468

Query: 449 YVTVEVIRQLAILLQAFVPK 468
           Y     ++ +  LL +F+P+
Sbjct: 469 YTCSVALKYIVYLLSSFMPE 488


>gi|206581116|ref|YP_002237459.1| methionyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|226710907|sp|B5XP89|SYM_KLEP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|206570174|gb|ACI11950.1| methionyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 677

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 232/504 (46%), Gaps = 43/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
           S  Y      +  D  V             G + +   A ++P + +             
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSSAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +   + I E   ++   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 419 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P+LA +
Sbjct: 479 TMGLNMFRVLMTWLKPVLPQLAAR 502


>gi|157157217|ref|YP_001463462.1| methionyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170681859|ref|YP_001743009.1| methionyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|191165345|ref|ZP_03027187.1| methionyl tRNA synthetase [Escherichia coli B7A]
 gi|193062824|ref|ZP_03043917.1| methionyl tRNA synthetase [Escherichia coli E22]
 gi|193069312|ref|ZP_03050268.1| methionyl tRNA synthetase [Escherichia coli E110019]
 gi|194428871|ref|ZP_03061405.1| methionyl tRNA synthetase [Escherichia coli B171]
 gi|209919574|ref|YP_002293658.1| methionyl-tRNA synthetase [Escherichia coli SE11]
 gi|218554679|ref|YP_002387592.1| methionyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218695732|ref|YP_002403399.1| methionyl-tRNA synthetase [Escherichia coli 55989]
 gi|218699295|ref|YP_002406924.1| methionyl-tRNA synthetase [Escherichia coli IAI39]
 gi|256017717|ref|ZP_05431582.1| methionyl-tRNA synthetase [Shigella sp. D9]
 gi|260844721|ref|YP_003222499.1| methionyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260856089|ref|YP_003229980.1| methionyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868819|ref|YP_003235221.1| methionyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293446466|ref|ZP_06662888.1| methionyl-tRNA synthetase [Escherichia coli B088]
 gi|300902240|ref|ZP_07120238.1| methionyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300917049|ref|ZP_07133742.1| methionyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300924516|ref|ZP_07140483.1| methionyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|306814769|ref|ZP_07448931.1| methionyl-tRNA synthetase [Escherichia coli NC101]
 gi|307314906|ref|ZP_07594496.1| methionyl-tRNA synthetase [Escherichia coli W]
 gi|331668809|ref|ZP_08369657.1| methionine--tRNA ligase [Escherichia coli TA271]
 gi|187647719|sp|A7ZNT3|SYM_ECO24 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695278|sp|B7NPL8|SYM_ECO7I RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695279|sp|B7M4V9|SYM_ECO8A RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695281|sp|B1LN54|SYM_ECOSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710905|sp|B6HYV5|SYM_ECOSE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782865|sp|B7L9Y6|SYM_ECO55 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157079247|gb|ABV18955.1| methionyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170519577|gb|ACB17755.1| methionyl tRNA synthetase [Escherichia coli SMS-3-5]
 gi|190904508|gb|EDV64215.1| methionyl tRNA synthetase [Escherichia coli B7A]
 gi|192931467|gb|EDV84068.1| methionyl tRNA synthetase [Escherichia coli E22]
 gi|192957445|gb|EDV87892.1| methionyl tRNA synthetase [Escherichia coli E110019]
 gi|194413039|gb|EDX29327.1| methionyl tRNA synthetase [Escherichia coli B171]
 gi|209912833|dbj|BAG77907.1| methionyl-tRNA synthase [Escherichia coli SE11]
 gi|218352464|emb|CAU98240.1| methionyl-tRNA synthetase [Escherichia coli 55989]
 gi|218361447|emb|CAQ99034.1| methionyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218369281|emb|CAR17039.1| methionyl-tRNA synthetase [Escherichia coli IAI39]
 gi|257754738|dbj|BAI26240.1| methionyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759868|dbj|BAI31365.1| methionyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257765175|dbj|BAI36670.1| methionyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291323296|gb|EFE62724.1| methionyl-tRNA synthetase [Escherichia coli B088]
 gi|300405645|gb|EFJ89183.1| methionyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300415685|gb|EFJ98995.1| methionyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300419282|gb|EFK02593.1| methionyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|305852163|gb|EFM52615.1| methionyl-tRNA synthetase [Escherichia coli NC101]
 gi|306905612|gb|EFN36142.1| methionyl-tRNA synthetase [Escherichia coli W]
 gi|315061427|gb|ADT75754.1| methionyl-tRNA synthetase [Escherichia coli W]
 gi|315255375|gb|EFU35343.1| methionyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320199178|gb|EFW73771.1| Methionyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323152334|gb|EFZ38623.1| methionyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323161833|gb|EFZ47712.1| methionyl-tRNA synthetase [Escherichia coli E128010]
 gi|323172706|gb|EFZ58340.1| methionyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323176992|gb|EFZ62582.1| methionyl-tRNA synthetase [Escherichia coli 1180]
 gi|323183730|gb|EFZ69122.1| methionyl-tRNA synthetase [Escherichia coli 1357]
 gi|323377994|gb|ADX50262.1| methionyl-tRNA synthetase [Escherichia coli KO11]
 gi|323944929|gb|EGB40994.1| methionyl-tRNA synthetase [Escherichia coli H120]
 gi|324015992|gb|EGB85211.1| methionyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118043|gb|EGC11942.1| methionyl-tRNA synthetase [Escherichia coli E1167]
 gi|331064003|gb|EGI35914.1| methionine--tRNA ligase [Escherichia coli TA271]
          Length = 677

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|319950591|ref|ZP_08024499.1| methionyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319435730|gb|EFV90942.1| methionyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 617

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 235/524 (44%), Gaps = 67/524 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + TA+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  +   A+  
Sbjct: 5   VLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNDVLMVSGTDEHGTPLLVQAEKE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +   D+ +R   D    L +SYD F RTT + H+   + L++ +   G +     +
Sbjct: 65  GVPVQELADRYNRVIVDDLAGLGLSYDLFTRTTTRNHYAVVQELFRGLHRNGYMVAKTTT 124

Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPV--------------QWM 160
           G  S        D           D+  +G        Q +P               +++
Sbjct: 125 GAVSPSTGRTLPDRYIEGTCPICGDDGARGDQCDNCGNQLDPADLKNPRSRINGETPKFI 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217
           E E +F  L A  D L  + +   ++      R  V+ F  + L+DL   ++SR   DWG
Sbjct: 185 ETEHWFLDLPALADSLGDWLKGRKDW------RPNVLKFSLNLLEDLRPRAMSRD-IDWG 237

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIGK 265
           I IP     D     +YVW DA+  YL+ +    +      +  ++W        + +GK
Sbjct: 238 IPIPVDGWADRGDKKLYVWFDAVVGYLSASIEWAWRTGEPEAWRRWWTDPEAVSHYFMGK 297

Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WPA L+                 L LP +V S  F+   G K S S G VI
Sbjct: 298 DNITFHSQIWPAELIGYDGRGAHGGEPGPLGALTLPTEVVSSEFLTMSGSKFSSSRGVVI 357

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + + E G DALRYF+       +D  +  D   +R NA+L  G GNLV+R+VSM  K
Sbjct: 358 YVRDFLAEFGPDALRYFIAVAGPENQDTDFTWDEYVRRTNAELVGGWGNLVNRTVSMAHK 417

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++ G IP PG  T+ D  +L         +  +++       + + + +V   +RY  A 
Sbjct: 418 NF-GEIPRPGTLTDLDAELLRDAESAFATVGAHLERSRFKAGVTEAMRIVGAANRYIAAT 476

Query: 432 KPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +PW+L K     +R  TVL+  ++V+     LL  ++P  A +I
Sbjct: 477 EPWKLAKEPEQRERLGTVLHTALQVVSDANTLLTPYLPSAAQQI 520


>gi|218705643|ref|YP_002413162.1| methionyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293405583|ref|ZP_06649575.1| metG [Escherichia coli FVEC1412]
 gi|298381264|ref|ZP_06990863.1| methionyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300901272|ref|ZP_07119370.1| methionyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|226695280|sp|B7NCE4|SYM_ECOLU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218432740|emb|CAR13634.1| methionyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284922102|emb|CBG35181.1| Methionyl-tRNA synthetase [Escherichia coli 042]
 gi|291427791|gb|EFF00818.1| metG [Escherichia coli FVEC1412]
 gi|298278706|gb|EFI20220.1| methionyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300355269|gb|EFJ71139.1| methionyl-tRNA synthetase [Escherichia coli MS 198-1]
          Length = 677

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|320195981|gb|EFW70605.1| Methionyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|324006407|gb|EGB75626.1| methionyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 677

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|315079929|gb|EFT51905.1| methionyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 601

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A    L S+ ++  ++      R  V+ F  + L++L     T   D
Sbjct: 191 EFRETEHFFLDLPALAGSLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+S
Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y
Sbjct: 424 MAFKNCH-EIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|30063551|ref|NP_837722.1| methionyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56480038|ref|NP_708001.2| methionyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110806076|ref|YP_689596.1| methionyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|71153570|sp|Q83KH0|SYM_SHIFL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123048090|sp|Q0T324|SYM_SHIF8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30041804|gb|AAP17531.1| methionine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383589|gb|AAN43708.2| methionine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110615624|gb|ABF04291.1| methionine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|281601555|gb|ADA74539.1| Methionyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313649839|gb|EFS14259.1| methionyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 677

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|218549528|ref|YP_002383319.1| methionyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226695282|sp|B7LV75|SYM_ESCF3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218357069|emb|CAQ89701.1| methionyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|331647762|ref|ZP_08348854.1| methionine--tRNA ligase [Escherichia coli M605]
 gi|331043486|gb|EGI15624.1| methionine--tRNA ligase [Escherichia coli M605]
          Length = 680

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|323977697|gb|EGB72783.1| methionyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 680

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|301305156|ref|ZP_07211255.1| methionyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301329302|ref|ZP_07222270.1| methionyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301644128|ref|ZP_07244138.1| methionyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|309792992|ref|ZP_07687420.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331678063|ref|ZP_08378738.1| methionine--tRNA ligase [Escherichia coli H591]
 gi|331683792|ref|ZP_08384388.1| methionine--tRNA ligase [Escherichia coli H299]
 gi|300839560|gb|EFK67320.1| methionyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300844392|gb|EFK72152.1| methionyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301077528|gb|EFK92334.1| methionyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|308123278|gb|EFO60540.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331074523|gb|EGI45843.1| methionine--tRNA ligase [Escherichia coli H591]
 gi|331078744|gb|EGI49946.1| methionine--tRNA ligase [Escherichia coli H299]
 gi|332101085|gb|EGJ04431.1| methionyl-tRNA synthetase [Shigella sp. D9]
          Length = 680

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|300818887|ref|ZP_07099092.1| methionyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300528506|gb|EFK49568.1| methionyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|320173698|gb|EFW48886.1| Methionyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTHSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|312973641|ref|ZP_07787813.1| methionyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|310332236|gb|EFP99471.1| methionyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|300936576|ref|ZP_07151483.1| methionyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458296|gb|EFK21789.1| methionyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 658

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|320178044|gb|EFW53025.1| Methionyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|194431555|ref|ZP_03063847.1| methionyl tRNA synthetase [Shigella dysenteriae 1012]
 gi|194420380|gb|EDX36457.1| methionyl tRNA synthetase [Shigella dysenteriae 1012]
 gi|332091488|gb|EGI96572.1| methionyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|187732521|ref|YP_001879553.1| methionyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|226710924|sp|B2TVX7|SYM_SHIB3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187429513|gb|ACD08787.1| methionyl tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|307138768|ref|ZP_07498124.1| methionyl-tRNA synthetase [Escherichia coli H736]
 gi|315618108|gb|EFU98699.1| methionyl-tRNA synthetase [Escherichia coli 3431]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINMFRVLMTYLKPVLPKLTER 502


>gi|331673641|ref|ZP_08374404.1| methionine--tRNA ligase [Escherichia coli TA280]
 gi|331068914|gb|EGI40306.1| methionine--tRNA ligase [Escherichia coli TA280]
          Length = 680

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEDRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|300821783|ref|ZP_07101928.1| methionyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300525625|gb|EFK46694.1| methionyl-tRNA synthetase [Escherichia coli MS 119-7]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLTSELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|15802593|ref|NP_288620.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15832174|ref|NP_310947.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168750112|ref|ZP_02775134.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168756378|ref|ZP_02781385.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168761860|ref|ZP_02786867.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168770093|ref|ZP_02795100.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168775929|ref|ZP_02800936.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783890|ref|ZP_02808897.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789082|ref|ZP_02814089.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195937886|ref|ZP_03083268.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208806897|ref|ZP_03249234.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208814010|ref|ZP_03255339.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208820874|ref|ZP_03261194.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397521|ref|YP_002271396.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217329495|ref|ZP_03445574.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254793941|ref|YP_003078778.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261224994|ref|ZP_05939275.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257658|ref|ZP_05950191.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283362|ref|YP_003500180.1| Methionyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|25009369|sp|Q8X7E7|SYM_ECO57 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710903|sp|B5YV64|SYM_ECO5E RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12516327|gb|AAG57175.1|AE005437_10 methionine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13362389|dbj|BAB36343.1| methionine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768610|gb|EDU32454.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188015612|gb|EDU53734.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188998822|gb|EDU67808.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356515|gb|EDU74934.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360933|gb|EDU79352.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189367747|gb|EDU86163.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189371227|gb|EDU89643.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208726698|gb|EDZ76299.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208735287|gb|EDZ83974.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208740997|gb|EDZ88679.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158921|gb|ACI36354.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209747798|gb|ACI72206.1| methionine tRNA synthetase [Escherichia coli]
 gi|209747800|gb|ACI72207.1| methionine tRNA synthetase [Escherichia coli]
 gi|209747802|gb|ACI72208.1| methionine tRNA synthetase [Escherichia coli]
 gi|217317263|gb|EEC25692.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|226237469|dbj|BAH46991.1| methionyl-tRNA synthetase [Escherichia coli O55:H7]
 gi|254593341|gb|ACT72702.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290763235|gb|ADD57196.1| Methionyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320191722|gb|EFW66370.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320641295|gb|EFX10768.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320646659|gb|EFX15563.1| methionyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651946|gb|EFX20314.1| methionyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657546|gb|EFX25344.1| methionyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663153|gb|EFX30462.1| methionyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668028|gb|EFX34924.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338468|gb|EGD62296.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326347009|gb|EGD70742.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|124003887|ref|ZP_01688735.1| methionyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990942|gb|EAY30409.1| methionyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 707

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 252/523 (48%), Gaps = 48/523 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+ A+ Y N   HIGH A   I AD+ AR+ RL G DV+F +G+DEHG  +  
Sbjct: 4   KKHKRHIITAALPYANGAAHIGHLAGVYIPADIYARYLRLKGEDVMFVSGSDEHGVPVTI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+  +  RD       ++D + RT+ + HH+T +  + K+  +G + 
Sbjct: 64  RAEKEGVTVQQVVDKYDQVIRDSFKEFGFTFDVYSRTSRQIHHETSQEFFLKLHAEGKLQ 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHN-------------------- 155
           K     ++    + +  D  +       G D  Y +   N                    
Sbjct: 124 KKVSQQFFDPTAQRFLADRLIIGTCPKCGNDNAYGDQCENCGSTLSPDELIDPRSTLSNA 183

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            ++  E E ++  L  Y+D L  +     +         +  S++ SGL   +++R   D
Sbjct: 184 ALEKKETEHWYIPLDQYEDWLKDWILDSHKDDWKTNVYGQCKSWLDSGLHPRAVTRD-LD 242

Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTTG-YLDN--PDGSK----AKFWPAD----LHV 262
           WGI++P  +    +MYVW DA   Y++ T  Y     PDGS      K+W ++    +H 
Sbjct: 243 WGIQVPLPNSEGKVMYVWFDAPIGYISATKEYFKEKAPDGSLDEEWKKYWQSEDSKLVHF 302

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH I +P+ L +     LP+ V ++ F+  + EKIS S    +   E + E  
Sbjct: 303 IGKDNIVFHCIMFPSMLKAHGEYVLPENVPANEFMNLEDEKISTSRNWAVWLHEYLREFE 362

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L  +     D  +  +G +KR N +LA+ +GN V R V++  K Y G++P 
Sbjct: 363 GKQDVLRYALTADAPETSDSNFTWEGFQKRNNNELADNLGNFVRRPVALTHKYYGGVVPP 422

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW---- 434
                TE D++++   +   ++I + ++      ALAQV+ L    ++Y     PW    
Sbjct: 423 LNDNLTEDDQALIDALAAYPKKIGKAIEEYKFREALAQVMDLSRMGNQYLQKTSPWLLYK 482

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E K+ +  R  T+L+++++V   LA+L + F+P  A K+ ++L
Sbjct: 483 EDKEKHAQRIETILHLSLQVAANLALLCEPFLPFTAEKLRNML 525


>gi|331642730|ref|ZP_08343865.1| methionine--tRNA ligase [Escherichia coli H736]
 gi|331039528|gb|EGI11748.1| methionine--tRNA ligase [Escherichia coli H736]
          Length = 680

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINMFRVLMTYLKPVLPKLTER 505


>gi|327332352|gb|EGE74088.1| methionine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 601

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 243/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSEM 133

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLIDPRSKTTGAAP 190

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   D
Sbjct: 191 EFRETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLD 244

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 245 WGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSR 363

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+S
Sbjct: 364 GATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSIS 423

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y
Sbjct: 424 MAFKNCH-EIPAVGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|327253241|gb|EGE64895.1| methionyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|194436183|ref|ZP_03068285.1| methionyl tRNA synthetase [Escherichia coli 101-1]
 gi|253772958|ref|YP_003035789.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162129|ref|YP_003045237.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300930934|ref|ZP_07146296.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|194424911|gb|EDX40896.1| methionyl tRNA synthetase [Escherichia coli 101-1]
 gi|242377757|emb|CAQ32519.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324002|gb|ACT28604.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974030|gb|ACT39701.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978198|gb|ACT43868.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300461223|gb|EFK24716.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|323961710|gb|EGB57314.1| methionyl-tRNA synthetase [Escherichia coli H489]
          Length = 677

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|323968243|gb|EGB63652.1| methionyl-tRNA synthetase [Escherichia coli M863]
          Length = 680

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|108762836|ref|YP_631021.1| methionyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|123374596|sp|Q1D8K2|SYM_MYXXD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|108466716|gb|ABF91901.1| methionyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 703

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 253/549 (46%), Gaps = 54/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  +++A+ Y N   HIGHA E +  D+  RF R  G DV++    D HG  I   A  
Sbjct: 3   ERTLVTSALPYANGPLHIGHAVEYVQTDIYVRFLRSCGRDVVYFCADDTHGTPIELNAAK 62

Query: 65  AGVTTKVFV----DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            G+  + F+    +++ R+F D    LD+ +D F  T    +     +++ ++ +KGDI 
Sbjct: 63  QGLKPEEFIARFHEEHQRDFHD----LDVRFDYFHSTNSPENRQYAELIYGRLKEKGDIE 118

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME------- 161
           +      Y   D  +   D   KG      A  QY +A       ++P   ++       
Sbjct: 119 RRNIEQTYCENDRRFL-PDRFIKGTCPNCKASDQYGDACEKCGKAYDPTDLIDARCALCG 177

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   E  FF+LS ++D  L      P FI P     ++  F + GL D  +SR   
Sbjct: 178 TPPVRKHSEHLFFKLSRHED-FLQDVLRKPGFIHP-GLATQLQGFFEKGLSDWDISRDGP 235

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKD 266
            +G  IP +     YVW+DA   Y+ TT       G   S   +W AD     +H IGKD
Sbjct: 236 YFGFAIPGETDKYFYVWLDAPIGYIATTEKWAKETGKAKSALDYWSADADTRIIHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A   +P ++  HG ++  GEK+SK+ G ++   + ++++    LR
Sbjct: 296 IVYFHALFWPAVLNVAGFHIPSEIKVHGHLMLNGEKMSKTRGTMVPVRDYLDQLDPSYLR 355

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           YF    +  G +D   +    ++RVN +L N +GNL +R++S++    +  +    A   
Sbjct: 356 YFYAANLGPGVEDLDLNLKDFRQRVNGELVNNVGNLANRALSLLAGPLEKRLAPGRAEGP 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRA 444
             E + +  +RV  E+R+   ++L +R+  +VI+ + S  + +     PW   K + + A
Sbjct: 416 GRELVEAALARV-PEVRDAF-DKLEYRSAIRVITEIASAANGFLQTAAPWAQVKKDAEVA 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--- 501
              L    +V   L  LL    P+L+ K+F  L    E   FQ+L+    P     +   
Sbjct: 474 RADLSDAADVAYLLGALLAPVTPRLSEKLFAQL--GAEPLTFQALEGAKYPLLDRSRPIG 531

Query: 502 TFDPIFPRF 510
           T +P+ PR 
Sbjct: 532 TPEPLLPRL 540


>gi|157161597|ref|YP_001458915.1| methionyl-tRNA synthetase [Escherichia coli HS]
 gi|170019566|ref|YP_001724520.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|188496162|ref|ZP_03003432.1| methionyl tRNA synthetase [Escherichia coli 53638]
 gi|256022200|ref|ZP_05436065.1| methionyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|187647720|sp|A8A1X8|SYM_ECOHS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189083260|sp|B1IYW7|SYM_ECOLC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157067277|gb|ABV06532.1| methionyl tRNA synthetase [Escherichia coli HS]
 gi|169754494|gb|ACA77193.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|188491361|gb|EDU66464.1| methionyl tRNA synthetase [Escherichia coli 53638]
 gi|309702432|emb|CBJ01756.1| Methionyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 677

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|293415399|ref|ZP_06658042.1| methionyl-tRNA synthetase [Escherichia coli B185]
 gi|291433047|gb|EFF06026.1| methionyl-tRNA synthetase [Escherichia coli B185]
          Length = 677

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|126179956|ref|YP_001047921.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|187647748|sp|A3CX39|SYM_METMJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|125862750|gb|ABN57939.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 664

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 233/508 (45%), Gaps = 41/508 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L ++  + Y N   HIGH    + AD   R+ R  G +V+F  G+D HG  I  +A+  G
Sbjct: 6   LLVTCGLPYTNGPCHIGHLRTYVPADFYVRYMRRSGEEVVFVCGSDNHGTPIVISAEQEG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +V  ++   +F +    +D+ +D F  T +  +H+T R + +++ + G +Y    S 
Sbjct: 66  STPRVLSERYHEHFYETFRRMDVVFDRFGMTDDAMNHETTRSIVERLIENGYVYAETVSQ 125

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWME 161
            Y    E +  D            V +G +      QH                  ++ E
Sbjct: 126 SYCPDCERFLPDRYVEGICPHCGAVARGDECDQGCGQHLEPGEIKDAICKVCGGKAEYRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E YFFRLSA+++ LL Y    P        RN  + +VK  L D  ++R T DWG+K P
Sbjct: 186 QEHYFFRLSAFREFLLDYL---PALGGTSTARNYALGWVKELLHDWCITR-TLDWGVKFP 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYWP 276
                ++YVW+DA   Y++ T       G+  K +W  D     H IG DI+  H I+WP
Sbjct: 242 GRDDLVVYVWVDAPIGYISFTKEWAQKAGADWKDYWCGDETGVTHFIGGDIIYHHCIFWP 301

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334
           A L  A   LP  V + G +  +G+K SKS G V+   +   + G+  D LRY+L+    
Sbjct: 302 ALLKGAGYGLPSAVVASGMVTIEGKKFSKSRGYVVWTNDDYLDQGLPADYLRYYLLSYTN 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K+  +      +RVN ++   +GN + R++    K++ G +P      E  E I    
Sbjct: 362 HTKELDFSWKVYGERVNNEIVGTLGNFIYRTMYFAEKEFSG-VPDLAPRLEVIEEI---- 416

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R L  +   M++     A+  +++L S  + Y     PW+L K +   A  V+   +++
Sbjct: 417 ERSLAAVDGLMRDYDFKNAVDAMMTLASFGNGYIQNNAPWKLIKEDRAAAEQVIADCLQI 476

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE 482
           ++ L ++ +  +P    + + +L   D+
Sbjct: 477 VKALVLVFEPLMPDAMQRAWTMLGYGDD 504


>gi|150403248|ref|YP_001330542.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|187647747|sp|A6VIW5|SYM_METM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150034278|gb|ABR66391.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 663

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 225/499 (45%), Gaps = 48/499 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL G +V+   GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L++S+D F RT    H +T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME------------- 161
             +Y  + + Y  D  V           +G   +       P + +              
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE  +P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271
           P     +MYVWI+A   Y++ T          +L+N   SK        H IGKDI   H
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGGIWEDYWLENTGDSKIS------HFIGKDITVHH 291

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A++WP  L       +P  V S G++  + +K+S S   V+   + IE    D LRYF +
Sbjct: 292 AVFWPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFM 351

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDES 389
                 +D  +  D  +KR+N +L + IGN   R++    + +    I       + D+ 
Sbjct: 352 INAPLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPIVDSNQLIDEDKK 411

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++S C   L  +   ++      AL ++I L  E + YF    PW +K  + +R   V+Y
Sbjct: 412 LISKCESTLNRVDSLIREYNFKDALMEIILLAKEGNAYFQGMAPWAIK--DDERLKEVMY 469

Query: 450 VTVEVIRQLAILLQAFVPK 468
                ++ +  LL +F+P+
Sbjct: 470 TCSVALKYIIYLLSSFMPE 488


>gi|323972901|gb|EGB68099.1| methionyl-tRNA synthetase [Escherichia coli TA007]
          Length = 680

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|325497930|gb|EGC95789.1| methionyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 677

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|326318528|ref|YP_004236200.1| methionyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375364|gb|ADX47633.1| methionyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 697

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 233/519 (44%), Gaps = 49/519 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K++++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  AA+ A
Sbjct: 5   KIFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMQGAEVNFVGADDTHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   +   I +D++  T    +H+  R +++ +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKPYLEGFHIRFDNWHSTDAPENHELARQIYRDLQAAGLIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------- 161
            ++      +  D  +             G + +   A + P   +E             
Sbjct: 125 QFFDPEKNMFLPDRFIKGECPRCHARDQYGDNCENCGAVYAPTDLIEPYSALSGAKPVLK 184

Query: 162 -EEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKDLSLSR 211
             + +FF+LS     A+  +        PE    ++     R         GL D  +SR
Sbjct: 185 SSDHFFFQLSDPRCVAFLQEWTQDGRLQPEVANKVKEWFSVRTNPDGTTSEGLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
               +GI+IPD P    YVW+DA   YL +   L    G     + AD      H IGKD
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLEKRGQSYDDYVADPQLEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
           I+ FH ++WPA L  +    P  VF HGF+ ++ GEK+SKS G  +DP++ +  +G++A 
Sbjct: 305 IVTFHTLFWPAMLKFSGRKTPDAVFVHGFLTVNNGEKMSKSRGTGLDPLKYL-GLGMNAE 363

Query: 325 -LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   + K + G + TP A
Sbjct: 364 WLRYYLAAKLNGRNEDIDFNAEDFMARVNSDLIGKFVNIASRAAGFLTKRFGGRLGTPDA 423

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
                 ++L         I E  + +   RA+ + + L   V+ Y DA+KPWEL K    
Sbjct: 424 ---DGAALLEALRAQAGAIAEAYERRDTARAVRETMLLADRVNEYVDARKPWELAKQEGQ 480

Query: 443 RASTVLYVT--VEVIRQLAILLQAFVPKLANKIFDILFV 479
            A+     T  +E  R L + L+  +P LA ++   L V
Sbjct: 481 EAALQAACTTCIEAFRLLTLYLKPVLPALAAQVEAFLNV 519


>gi|261402933|ref|YP_003247157.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369926|gb|ACX72675.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 655

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 246/500 (49%), Gaps = 41/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+AY N   H+GHA    I AD++ ++ +L G DV+   GTD HG  I   A+  G 
Sbjct: 5   ITTALAYTNGPLHLGHARSTYIPADIMYKYLKLRGEDVIHVGGTDNHGVPITLTAEKEGK 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  V++     ++  D+L++ +D F +T  + H +T +  + K+ + G IY+     +
Sbjct: 65  SPEEIVEKYHNEIKEDLDLLNVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQ-----------HNPV--------QWMEEE 163
           Y  + + +  D  V     Y G + +  + +            NP         +  + +
Sbjct: 125 YCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKNPYCVICKGTPEIRKTK 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LSA +++L  Y ++  E  +P   +N  ++++K  L D  +SR    WG+ IP  
Sbjct: 185 HYFFKLSALKNELEEYIKNAEE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279
            Q +MYVW++A   Y++ +  L +      K+W        H IGKDI   HA++WP  L
Sbjct: 241 NQ-VMYVWLEAPIGYISFSKMLGD---IWKKYWLEKGTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           ++     LP  V S G++  +G K+S S   V+   + ++    D LRY+L+      KD
Sbjct: 297 IAHKGFNLPAAVVSGGYLTLEGRKMSTSKKWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  + I       E D+++L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDENRLKEEDKALLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ + +N+++     AL  ++ L  + + YF   +PW +K  + +R   +LY   + ++ 
Sbjct: 417 IKAVDKNIRSFKFRDALVNILHLAIDGNAYFQKMEPWAVK--DEERLKEILYTCCKTVKT 474

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L  LL  ++PK A  + +++
Sbjct: 475 LIYLLYPYMPKKALALLELM 494


>gi|332036949|gb|EGI73408.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 673

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 234/509 (45%), Gaps = 51/509 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  V Q S    RD AD  +I +D++  T  + + +   +++ +++D G I K 
Sbjct: 63  KQGITPEEAVKQVSIERQRDFAD-FNIKFDNYHSTHSQENKELSELIYNRLNDAGHIKKH 121

Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G       A ++P   +           
Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSENQNGDSCDSCGATYSPTDLINPRSVMSGAEP 181

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E YFF L A++  L  +  S     +  E  N++  +   GL+   +SR    +G
Sbjct: 182 VLKDSEHYFFDLPAFEGMLKEWLHSG---TIQQEMANKLDEWFTDGLQQWDISRDAPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFH 271
            +IP+ P    YVW+DA   Y+ +   L +  G     FW     A+L H IGKDI+ FH
Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKTGIDFDAFWAEGSDAELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  AN   P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+   
Sbjct: 299 SLFWPAMLEGANFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTES 386
           +++ G  D   + +   +RVN+DL   + N+ SR    I K +DG    +I  P    E 
Sbjct: 359 KLSSGIVDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSNIIMQPELLAEF 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
             +  S+ +        + +N+   RA+ ++++L  + +++ D   PW L K  T    A
Sbjct: 419 QAAAPSITT--------HYENRDYSRAIREIMALADKANQFIDGAAPWVLIKDETKQQEA 470

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V  + + + R L   L+  +P +A+ +
Sbjct: 471 HEVCSLGLNLFRVLITYLKPVLPGMADNV 499


>gi|307701515|ref|ZP_07638533.1| methionine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613307|gb|EFN92558.1| methionine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 604

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 243/524 (46%), Gaps = 58/524 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     I +DV +R+ R+ G +VL  +GTDEHG  I   A+ 
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+N+R   +    L +SYD F RTT   H+ T R +++ + D G +     
Sbjct: 63  EGLTPRQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQTVRAMFEVVRDNGYMLVQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +         +GA G   +A  N +                 ++
Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E E YF  L A  + L  + +   E       R  VI F K+ LK++     T   DWG
Sbjct: 183 VETEHYFLDLPALAEALTKWLD---EREATGTWRPNVIKFSKNFLKEIKPRAMTRDIDWG 239

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268
           I IP  +D    +YVW DA+  YL+ +       G      K+W  P  L  + +GKD +
Sbjct: 240 IPIPGWEDQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNI 299

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WPA LL  N              L LP +V S  F+  +G+K + S G VI   
Sbjct: 300 VFHSQIWPAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVR 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++E   VDALRYF+       +D  +      +R N +L    GNLV+R+ +MI K + 
Sbjct: 360 DMLERYQVDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRF- 418

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP  G     D+ +L + +     +   ++      AL +V+ LV E +RY    +P+
Sbjct: 419 GEIPPAGKLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPF 478

Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LK ++  +R  T+L+V  +V+  L  ++  F+P   N I  +L
Sbjct: 479 KLKDESQRNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVL 522


>gi|227876335|ref|ZP_03994448.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976089|ref|ZP_06183088.1| methionyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|227843108|gb|EEJ53304.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935682|gb|EEZ92217.1| methionyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 604

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 243/524 (46%), Gaps = 58/524 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     I +DV +R+ R+ G +VL  +GTDEHG  I   A+ 
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+N+R   +    L +SYD F RTT   H+ T R +++ + D G +     
Sbjct: 63  EGLTPRQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQTVRAMFEVVRDNGYMLVQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +         +GA G   +A  N +                 ++
Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E E YF  L A  + L  + +   E       R  VI F K+ LK++     T   DWG
Sbjct: 183 VETEHYFLDLPALAEALTKWLD---EREATGTWRPNVIKFSKNFLKEIKPRAMTRDIDWG 239

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268
           I IP  +D    +YVW DA+  YL+ +       G      K+W  P  L  + +GKD +
Sbjct: 240 IPIPGWEDQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNI 299

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WPA LL  N              L LP +V S  F+  +G+K + S G VI   
Sbjct: 300 VFHSQIWPAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVR 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++E   VDALRYF+       +D  +      +R N +L    GNLV+R+ +MI K + 
Sbjct: 360 DMLERYQVDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRF- 418

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP  G     D+ +L + +     +   ++      AL +V+ LV E +RY    +P+
Sbjct: 419 GEIPPAGKLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPF 478

Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LK ++  +R  T+L+V  +V+  L  ++  F+P   N I  +L
Sbjct: 479 KLKDESQRNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVL 522


>gi|85712085|ref|ZP_01043138.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694075|gb|EAQ32020.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 680

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 227/504 (45%), Gaps = 44/504 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   HIGH    I AD+  RF +L G +  +    D HG  I   AQ  
Sbjct: 7   KILVTNALPYANGPIHIGHLLGYIQADIWVRFQKLRGHECHYMCADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +    R+        +I +DD+  T  + +      +++++ D G I      
Sbjct: 67  GITPEQMIGDMQRSHEADFAGFNIGFDDYYTTHSEENKALAETIYQRLDDAGHIKTEVIE 126

Query: 126 GWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPV--------------QWM 160
             Y    + +  D     D    GA+ QY        A + P               +  
Sbjct: 127 QLYDPEKKMFLPDRFVKGDCPECGAEDQYGDNCDVCGATYAPTDLKNPRSVVSGATPELR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E YFF L A+ D L S+  S     L  E  N++  + + GL+   +SR    +G KI
Sbjct: 187 QSEHYFFDLPAFGDMLKSWTRSGS---LQGEMANKLNEWFEQGLQRWDISRDAPYFGFKI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273
           P       YVW+DA   Y+++  +  +  G+     +W AD      H IGKDI+ FH++
Sbjct: 244 PGTEDKYFYVWLDAPIGYMSSFKHYCDTTGNANWDDYWQADSTAEVYHFIGKDIIYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  V++HGFI   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 304 FWPAMLKGAQFRQPTNVWAHGFITVNGTKMSKSKGTFIKARTYLDHLNPEYLRYYFAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    +     +RVN+DL   + N+ SR    I K +DG +      + +D ++L 
Sbjct: 364 TSRIDDLDLNLTDFAQRVNSDLVGKVINIASRCAGFITKKFDGKLSA----SVADSALLE 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LY 449
                  EI E  + +   +A+ ++++L    ++Y   ++PW+L K NPD AS V     
Sbjct: 420 DFQNAGTEIAELYEQREFSKAMREIMTLADRANQYIADKEPWQLIK-NPDAASEVHDTCS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKI 473
           + + + R L + L   VP+L+  +
Sbjct: 479 LGINLFRILMVYLTPVVPELSKSV 502


>gi|163848994|ref|YP_001637038.1| methionyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526954|ref|YP_002571425.1| methionyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|187647712|sp|A9WKM1|SYM_CHLAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782859|sp|B9LDY3|SYM_CHLSY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|163670283|gb|ABY36649.1| methionyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450833|gb|ACM55099.1| methionyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 600

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 250/531 (47%), Gaps = 66/531 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + AD+ AR+HRL G  VL  +GTDEHG  I   A 
Sbjct: 3   EHILVAVAWPYANGPRHIGHVAGFGVPADIFARYHRLRGNHVLMISGTDEHGTPITLVAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D+ ++   D    L +SYD F RTT   H+   + +++ + ++G I +  
Sbjct: 63  KEGTTPQAIADRYNKIIGDDLYNLGLSYDIFTRTTTANHYAVTQDIFRTLYERGYIIRQE 122

Query: 124 YSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWME---------- 161
             G +S        D            DE  +G       +Q +P   +           
Sbjct: 123 TLGAFSATTGRTLPDRYIEGTCPICGYDEA-RGDQCDNCGSQLDPTDLINPRSKVDGQPP 181

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +F  L A+ ++L ++ +    +   +  RN  ++F+K  LK  +++R   +WG
Sbjct: 182 VFKPTEHFFLDLPAFAEQLHAWIDRQTHWRPNV--RNFSLNFLKE-LKPRAITRD-LEWG 237

Query: 218 IKIPDDPQYI------MYVWIDALTNYLTTT-GYLDN---PDGSKAKFW--PADLHV--I 263
           + IP  P+Y+      +YVW DA+  YL+ +  +  N   PD  +  +W  PA  H   +
Sbjct: 238 VPIPL-PEYVHRDDKKIYVWFDAVIGYLSASIEWARNSGQPDAWRT-WWQNPAARHFYFM 295

Query: 264 GKDILRFHAIYWPAFLLS-----------------ANLPLPKKVFSHGFILHKGEKISKS 306
           GKD + FH + WPA LL                    L LP  V S  F+  +G+K S S
Sbjct: 296 GKDNIVFHTVIWPAMLLGYGAGGDFGTDPSGTYQGVPLQLPYNVVSSEFLTMEGKKFSSS 355

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            G VI   + +     DALRYFL       +D  +      +R N +L    GNLV+R++
Sbjct: 356 RGIVIYVNDFLSRYDADALRYFLTIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTL 415

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + + K++ G +P PG  T +DE ++   +  L+ + + +       AL++ + L ++V+ 
Sbjct: 416 TNVYKNF-GSVPQPGPLTATDEQLIQEVNGGLETVGDLLATARFKAALSEAMRLAAQVNI 474

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y   Q+PW++ K++ +RA+T+ YV +  +  L I+   F+P  + ++ + L
Sbjct: 475 YLSEQEPWKVIKSDRERAATIWYVALRCVDTLKIIFTPFLPFSSQRLHEYL 525


>gi|237746649|ref|ZP_04577129.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378000|gb|EEO28091.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 695

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 244/521 (46%), Gaps = 59/521 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-----GLDVLFTTGTDEHGQKIAK 60
           KL+++TA+ Y NA  HIGH  E I AD+  RF R+        +V F    D HG  I  
Sbjct: 4   KLFVTTALPYANAPFHIGHIMEYIQADIWVRFQRMQQDNGKQREVHFVGADDVHGAPIMI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV + +       +   IS+D++  T    +++  R +++++  KG I 
Sbjct: 64  AAEKAGKTPQEFVAEIAAGRAAPLNGFLISFDNWHSTDGSENYELSREIYRRLKAKGLIE 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM--- 160
                 ++    E +  D     E  K GA  QY +               NP   +   
Sbjct: 124 SKTIEQFFDPVKEMFLPDRYIKGECPKCGAKDQYGDTCESCSSVYTPTELKNPYSILTGA 183

Query: 161 -----EEEGYFFRLSAYQ------DKLLSYYESHPEFILPIERRNEVISFV------KSG 203
                + E +FF+LS  Q      +  L   +  P   L  E  N+   ++      ++ 
Sbjct: 184 TPVMKQSEHFFFKLSDPQCTAFLKEWTLGNVDGEPR--LQPEVANKAREWLEGKEGEENA 241

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---- 259
           L D  +SR    +GI+IPD P    YVW+DA   YL +     N  G     + AD    
Sbjct: 242 LSDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNYFNKTGGDYDAFMADPETE 301

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FH ++WPA L  A++ +P  V+ HGFI   GEK+SKS G  I P+  + 
Sbjct: 302 QYHFIGKDIIYFHTLFWPAMLHFADMRVPDNVYVHGFITVGGEKMSKSRGTGISPLRYL- 360

Query: 319 EVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+G++   LRY+L  +++   +D  +  D    RVNADL     N+ SR+   I K + G
Sbjct: 361 EIGMNPEWLRYYLAAKLSDRVEDIDFTGDDFIARVNADLVGKYVNIASRAAGFITKRFGG 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +     +   D  +L        EI E  + +   +AL Q++ L  EV+ Y DA KPW 
Sbjct: 421 KLAK--DWKTEDTPVLDTLRAASGEIAELYEKREFGKALRQIMHLADEVNAYVDANKPWV 478

Query: 436 LKKTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKI 473
           L K +P+++  +  V    +E  R L+I L+  +P ++ K+
Sbjct: 479 LAK-DPEKSEALHQVCTRLLEAFRILSIYLKPVLPAVSEKV 518


>gi|238898868|ref|YP_002924550.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511559|sp|C4K759|SYM_HAMD5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229466628|gb|ACQ68402.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 545

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 239/506 (47%), Gaps = 48/506 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   A+ 
Sbjct: 6   KKILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGHEVYFICADDAHGTAIMLKAEK 65

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +G+  +  +++ N ++  D +  L ISYD +  T    + +    +++++  KG I K  
Sbjct: 66  SGINPEKMIEEINQQHQNDFSGFL-ISYDHYYSTHSDENRELSVAIYQRLKAKGHIKKRA 124

Query: 124 YSGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH-----------NP 156
            S  Y    + +  D  V KG                A G  Y++              P
Sbjct: 125 ISQLYDPEKKLFLPDRFV-KGTCPKCQAPNQYGDNCEACGSTYSSTELIAPKSEVSGATP 183

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V   E E +FF L A+   L  +  S     L  +  N++ +++ SGL+   ++R T  +
Sbjct: 184 V-IRESEHFFFDLPAFTGMLTQWIHSGA---LQEQVANKMQTWLTSGLRQWDITRDTPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDG-SKAKFWPADL-----HVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   + D  +  S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPDKYFYVWLDAPIGYMGSFKNFCDKKENVSFDEFWQTDTKTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  ++   P  +F HG+I   G K+SKS G  I+  + ++ +  D LRY+ 
Sbjct: 300 FHSLFWPAVLEGSDFRKPTNLFVHGYITVNGAKMSKSRGTFIEASDYLKHLDPDCLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVNADL N + NL +R+ S I K + G++    A +E   
Sbjct: 360 AAKLSSHIDDIDLNLEDFVQRVNADLVNKVVNLAARNASFINKKFAGILSKELADSELYF 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446
           + +    R+         +    +A+ ++++L    +RY D Q PW L K   D A   +
Sbjct: 420 TFVQAGLRIANAYHARETS----KAIREIMALADLANRYVDEQAPWVLAKKEVDEAKLQS 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           V  + + + R L   L+  +P L+ +
Sbjct: 476 VCSMGIHLFRILMTYLKPVLPALSER 501


>gi|29654984|ref|NP_820676.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|161830148|ref|YP_001597519.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|68566002|sp|Q83B24|SYM_COXBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189083259|sp|A9NA60|SYM_COXBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29542253|gb|AAO91190.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|161762015|gb|ABX77657.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 546

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 52/547 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   A
Sbjct: 4   EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q  G+  +  V + +  + RD+   L I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 64  QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161
              S  Y    E +  D  +       GA  QY        A ++P + ++         
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L+ Y   L  + ++     L  +  N++  +    LK   +SR    +
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IP       YVW+DA   Y+ +   L    P  +   +W         H +GKDI+ 
Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHALFWPAMLSGAGFRLPTTIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   +D   + D   +RVNADL     NL SR    I K++ G +       +  E
Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYE 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           S L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K     A    
Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475

Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504
             T  + + + L   L+  +P  A K+   L       C +     LK   + H    F+
Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529

Query: 505 PIFPRFL 511
           P+  R L
Sbjct: 530 PLMQRLL 536


>gi|154706261|ref|YP_001423731.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|165918316|ref|ZP_02218402.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|189083258|sp|A9KDF8|SYM_COXBN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|154355547|gb|ABS77009.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|165917966|gb|EDR36570.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 546

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 52/547 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   A
Sbjct: 4   EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q  G+  +  V + +  + RD+   L I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 64  QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161
              S  Y    E +  D  +       GA  QY        A ++P + ++         
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L+ Y   L  + ++     L  +  N++  +    LK   +SR    +
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IP       YVW+DA   Y+ +   L    P  +   +W         H +GKDI+ 
Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHALFWPAMLSGAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   +D   + D   +RVNADL     NL SR    I K++ G +       +  E
Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYE 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           S L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K     A    
Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475

Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504
             T  + + + L   L+  +P  A K+   L       C +     LK   + H    F+
Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529

Query: 505 PIFPRFL 511
           P+  R L
Sbjct: 530 PLMQRLL 536


>gi|212211972|ref|YP_002302908.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064876|sp|B6J3N7|SYM_COXB2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|212010382|gb|ACJ17763.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 546

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 52/547 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   A
Sbjct: 4   EKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITA 63

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q  G+  +  V + +  + RD+   L I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 64  QKQGLPPEALVAKMHKEHARDLGGFL-IEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161
              S  Y    E +  D  +       GA  QY        A ++P + ++         
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L+ Y   L  + ++     L  +  N++  +    LK   +SR    +
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGH---LQPQVANKLKEWFSEDLKPWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IP       YVW+DA   Y+ +   L    P  +   +W         H +GKDI+ 
Sbjct: 240 GFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHALFWPAMLSGAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   +D   + D   +RVNADL     NL SR    I K++ G +       +  E
Sbjct: 360 AAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPELDLYE 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           S L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K     A    
Sbjct: 420 SFL----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQA 475

Query: 449 YVT--VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--FD 504
             T  + + + L   L+  +P  A K+   L       C +     LK   + H    F+
Sbjct: 476 VCTQGLNLFKILTTYLKPILPVTAKKVEQFL------NCDELNFANLKTPLLDHSVNPFE 529

Query: 505 PIFPRFL 511
           P+  R L
Sbjct: 530 PLMQRLL 536


>gi|157144942|ref|YP_001452261.1| methionyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|187647714|sp|A8AEB2|SYM_CITK8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157082147|gb|ABV11825.1| hypothetical protein CKO_00671 [Citrobacter koseri ATCC BAA-895]
          Length = 677

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 233/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L N  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKFFYVWLDAPIGYMGSFKNLCNKRGDLTSFDDYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADMANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|256810012|ref|YP_003127381.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793212|gb|ACV23881.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 650

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 240/500 (48%), Gaps = 41/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+AY N   H+GHA    I AD++ ++ +L G + +   GTD HG  I   A+  G 
Sbjct: 5   ITTALAYTNGPLHLGHARSTYIPADIMCKYLKLRGEEAIHVGGTDNHGVPITLTAEKEGK 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  V++     ++  D+L + +D F +T  + H +T +  + K+ + G IY+     +
Sbjct: 65  SPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124

Query: 128 YSLRDEAYYNDDEV-----YKGADGQ-------------------YYNAQHNPVQWMEEE 163
           Y  + + +  D  V     Y G + +                   Y        +  + +
Sbjct: 125 YCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKDPYCVICKGKPEIRKTK 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LSA +++L  Y ++  E  +P   +N  ++++K  L D  +SR    WG+ IP  
Sbjct: 185 HYFFKLSALKEELEEYIKNAEE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279
            Q +MYVW++A   Y++ T  L +      K+W        H IGKDI   HA++WP  L
Sbjct: 241 NQ-VMYVWLEAPIGYISFTKMLGD---VWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           ++  +  LP  V S G++  +G K+S S   V+   + ++    D LRY+LV      KD
Sbjct: 297 IAHGDYNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVKNFDADYLRYYLVMSAPLYKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  + I       E D+++L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDESRLKEEDKNLLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ + +N+++     AL  ++ L  E + YF   +PW +   N  R   +LY   + ++ 
Sbjct: 417 IEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAVDDEN--RLEEILYTCCKTVKT 474

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L  LL  ++PK +  + D++
Sbjct: 475 LVYLLYPYMPKKSLALLDLM 494


>gi|120612475|ref|YP_972153.1| methionyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|187645701|sp|A1TTU1|SYM_ACIAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120590939|gb|ABM34379.1| methionyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 706

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 233/519 (44%), Gaps = 49/519 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K++++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  AA+ A
Sbjct: 5   KIFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMQGAEVNFVGADDTHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   +   I +D++  T    +H+  R +++ +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKPYLEGFHIRFDNWHSTDAPENHELARQIYRDLQAAGLIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------- 161
            ++      +  D  +             G + +   A + P   +E             
Sbjct: 125 QFFDPEKNMFLPDRFIKGECPRCHARDQYGDNCENCGAVYAPTDLIEPYSALSGAKPVLK 184

Query: 162 -EEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKDLSLSR 211
             + +FF+LS     A+  +        PE    ++     R         GL D  +SR
Sbjct: 185 SSDHFFFQLSDPRCVAFLQEWTQDGRLQPEVANKVKEWFSVRTNPDGTTSEGLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
               +GI+IPD P    YVW+DA   YL +   L    G     + AD     +H IGKD
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLEKRGQSYDDYVADPQLEQVHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
           I+ FH ++WPA L  +    P  VF HGF+ ++ GEK+SKS G  +DP++ +  +G++A 
Sbjct: 305 IVTFHTLFWPAMLKFSGRKTPDAVFVHGFLTVNNGEKMSKSRGTGLDPLKYL-GLGMNAE 363

Query: 325 -LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   + K + G +  P A
Sbjct: 364 WLRYYLAAKLNGRNEDIDFNAEDFMARVNSDLIGKFVNIASRAAGFLTKRFGGRLGAPDA 423

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
                 ++L         I E  + +   RA+ + + L   V+ Y DA+KPWEL K    
Sbjct: 424 ---DGAALLEALRAQAGAIAEAYERRDTARAVRETMLLADRVNEYVDARKPWELAKQEGQ 480

Query: 443 RASTVLYVT--VEVIRQLAILLQAFVPKLANKIFDILFV 479
            A+     T  +E  R L + L+  +P LA ++   L V
Sbjct: 481 EAALQAACTTCIEAFRLLTLYLKPVLPALAAQVEAFLNV 519


>gi|68565977|sp|Q6A707|SYM_PROAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|50840790|gb|AAT83457.1| methionyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|314924211|gb|EFS88042.1| methionyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314965000|gb|EFT09099.1| methionyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|315093650|gb|EFT65626.1| methionyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103869|gb|EFT75845.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315106150|gb|EFT78126.1| methionyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|327325414|gb|EGE67218.1| methionine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 601

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 239/527 (45%), Gaps = 67/527 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK---- 121
           GVT +   ++  R        L +SYD +  T    H    + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSEM 133

Query: 122 GCY-------------------SGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160
           G +                    G+   R +   N       AD  G          ++ 
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEFR 193

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   DWGI
Sbjct: 194 ETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLDWGI 247

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGK 265
           ++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + +GK
Sbjct: 248 RVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYFMGK 306

Query: 266 DILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           D + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  
Sbjct: 307 DNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGAT 366

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  
Sbjct: 367 IFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAF 426

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A
Sbjct: 427 KNCH-EIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISA 485

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 486 EEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|328906096|gb|EGG25871.1| methionine--tRNA ligase [Propionibacterium sp. P08]
          Length = 601

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  ILAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++  R        L +SYD +  T    H    + ++ ++ + G + K    
Sbjct: 74  GLTAQECAEKYHRVIAADLQGLGLSYDLYTSTMTDNHAHVTQEIFTRLHENGYVVKKSEM 133

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 134 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLINPKSKTTGAAP 190

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A  + L S+ ++  ++      R  ++ F  + L++L     T   D
Sbjct: 191 EFRETEHFFLDLPAVAESLTSWIDTRTDW------RPNILKFSHNLLEELRPRAITRDLD 244

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 245 WGIRVPVEGWRDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 303

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 304 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEKLGILDLPTEIVSSEFLTMSGSKVSNSR 363

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+R +S
Sbjct: 364 GATIFVGDFLREFGPDALRYFIAIAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRLIS 423

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+  G IP  G  T++D  +L         + E + +     A+ + + +V   + Y
Sbjct: 424 MAFKNCHG-IPAAGELTDADRQLLDASVAGFDVVGELLAHAKFKAAITEAMRIVGLANAY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  +L  F+P  A KI++ L
Sbjct: 483 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMLTPFMPHSAQKIYEAL 531


>gi|282855068|ref|ZP_06264400.1| methionine--tRNA ligase [Propionibacterium acnes J139]
 gi|282581656|gb|EFB87041.1| methionine--tRNA ligase [Propionibacterium acnes J139]
 gi|314982128|gb|EFT26221.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090367|gb|EFT62343.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 601

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 239/527 (45%), Gaps = 67/527 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 14  VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK---- 121
           GVT +   ++  R        L +SYD +  T    H    + ++ ++ + G + K    
Sbjct: 74  GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSEM 133

Query: 122 GCY-------------------SGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160
           G +                    G+   R +   N       AD  G          ++ 
Sbjct: 134 GAFESSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEFR 193

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   DWGI
Sbjct: 194 ETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLDWGI 247

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGK 265
           ++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + +GK
Sbjct: 248 RVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYFMGK 306

Query: 266 DILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           D + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  
Sbjct: 307 DNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGAT 366

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  
Sbjct: 367 IFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAF 426

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A
Sbjct: 427 KNCH-EIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISA 485

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 486 EEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 531


>gi|284036390|ref|YP_003386320.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815683|gb|ADB37521.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 682

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 39/517 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  ++  ++ A+ Y N   HIGH A   + AD+  R+ R  G DV F +GTDEHG  I 
Sbjct: 2   LENPQRYTVTAALIYANGPIHIGHIAGCYLPADIYVRYLRSTGKDVAFISGTDEHGVPIT 61

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+     +       IS+D + RT+   HH+T +  +  + +KGD 
Sbjct: 62  IKAKKEGITPQEVVDKYYGQIKQAFSDFGISFDIYSRTSNAIHHETSQEFFTNLYNKGDF 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------- 161
            +     +Y      +  D  +             G   +      +P + +E       
Sbjct: 122 DEEVTEQYYDEVAGQFLADRYIVGTCPVCGNPNAYGDQCERCGTALSPTELIEPHSTLSG 181

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + +F  L   Q K+  Y  SHPE+   +    +  S++K GL+  +++R   
Sbjct: 182 SKPVLRSTKNWFLPLDRMQPKIEEYVNSHPEWKTNVA--GQCQSWLKEGLRPRAMTRD-L 238

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGIK+P  D    ++YVW DA   Y++ T       G   + +  D     +H IGKD 
Sbjct: 239 DWGIKVPLPDADGKVLYVWFDAPIGYISMTKEWAAEQGRDWELYWRDEHTKLVHFIGKDN 298

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L++  +  L   V ++ F+  +G+KIS S    +   E +EE+    D 
Sbjct: 299 IVFHCIIFPAMLMAEGSFILADNVPANEFMNLEGDKISTSRNWAVWLHEYLEELPGKQDV 358

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R NA+L    GN V+R+V +  K  DG +P  G  T
Sbjct: 359 LRYVLAANAPETKDSEFTWKDFQTRNNAELVGIFGNFVNRAVVLTQKFCDGKVPAIGELT 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D+ IL   +     I + +       AL  ++ L    ++Y    +PW++ KT+P RA
Sbjct: 419 AYDQQILDELALFPDRIGQAIGAYKFREALGHLMDLARLGNKYLAETEPWKVVKTDPLRA 478

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +T+L + +++   L+I+ + F+P  + K+ + L + +
Sbjct: 479 NTILNIALQISANLSIVCEPFLPFTSQKLRNQLNITE 515


>gi|302530295|ref|ZP_07282637.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439190|gb|EFL11006.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 594

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 238/523 (45%), Gaps = 64/523 (12%)

Query: 11  TAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           TA+A+P  N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A   G+
Sbjct: 3   TAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPITVQADKEGM 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+ +R   +    L +SYD F RTT   H    + ++  ++  G +      G 
Sbjct: 63  TPQQTADKYTRQIDEDLRGLGLSYDLFTRTTTGNHAAVTQEIFLALNRNGYVVPKTTRGA 122

Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWMEE 162
            S        D  +        Y GA G   +   N +                 +++E 
Sbjct: 123 ISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAAELINPKSRINGETPKFVET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E YF  L A+   L  +  +  ++      R  V++F K+ + D+     T   DWG+KI
Sbjct: 183 EHYFLDLPAFTQTLGDWLGTKTDW------RPNVLNFTKNLIDDMRPRPITRDLDWGVKI 236

Query: 221 P-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDIL 268
           P     D P    YVW DA+  Y + +      +G+   +  W A+      + +GKD +
Sbjct: 237 PLDGWRDQPLKRFYVWFDAVIGYFSASVEWARRNGTPDAWQEWWANPDARAYYFMGKDNI 296

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FHA  WPA LL  N              L LP ++ S  F+   G K S S G VI   
Sbjct: 297 TFHAQIWPALLLGQNGAGDRGGEPGKYGKLHLPDEIVSSEFLTMSGSKFSTSRGTVIYVH 356

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + + E G DALRYF+       +D  +  D   +R N +LAN  GNLV+RS+SM  K+ +
Sbjct: 357 DFLREFGPDALRYFISVAGPETQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKN-N 415

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP P A   +DE + ++  +  +    ++       A A+ + +V+  +RY   Q+PW
Sbjct: 416 GAIPAPTAPAPADEELKALSRQAFETAGGHLARSRFKLAAAEAMRVVTAANRYLSDQEPW 475

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LK  +PDR   VL+  ++V+     LL  F+P  A K+ + L
Sbjct: 476 KLKD-DPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHEAL 517


>gi|167551107|ref|ZP_02344862.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205324014|gb|EDZ11853.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 673

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ T  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|295098166|emb|CBK87256.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 677

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLKAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     + E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 478 CTMGLNMFRVLMTWLKPVLPQLAAR 502


>gi|161621793|ref|YP_056415.2| methionyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 592

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 239/527 (45%), Gaps = 67/527 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 5   VLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK---- 121
           GVT +   ++  R        L +SYD +  T    H    + ++ ++ + G + K    
Sbjct: 65  GVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSEM 124

Query: 122 GCY-------------------SGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160
           G +                    G+   R +   N       AD  G          ++ 
Sbjct: 125 GAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEFR 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E +F  L A  + L S+ ++  ++      R  V+ F  + L++L     T   DWGI
Sbjct: 185 ETEHFFLDLPALAESLASWIDTRTDW------RPNVLKFSHNLLEELRPRAITRDLDWGI 238

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGK 265
           ++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + +GK
Sbjct: 239 RVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYFMGK 297

Query: 266 DILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           D + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  
Sbjct: 298 DNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGAT 357

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  
Sbjct: 358 IFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAF 417

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K+    IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A
Sbjct: 418 KNCH-EIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISA 476

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++PW+LK  NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L
Sbjct: 477 EEPWKLKD-NPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEAL 522


>gi|313835960|gb|EFS73674.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927197|gb|EFS91028.1| methionyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970728|gb|EFT14826.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 592

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 73/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I  A+A+P  N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A   
Sbjct: 5   ILAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++  R        L +SYD +  T    H    + ++ ++ + G + K    
Sbjct: 65  GLTAQECAEKYHRVIAADLQGLGLSYDLYTSTMTDNHAHVTQEIFTRLHENGYVVKKSEM 124

Query: 126 GWY------SLRDE--------AYYNDDEVYKGADGQYYNAQHNPV-------------- 157
           G +      +L D           Y+D    +G        Q +P               
Sbjct: 125 GAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGDQCDNCGRQLDPADLINPKSKTTGAAP 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
           ++ E E +F  L A  + L S+ ++  ++      R  ++ F  + L++L     T   D
Sbjct: 182 EFRETEHFFLDLPAVAESLTSWIDTRTDW------RPNILKFSHNLLEELRPRAITRDLD 235

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WGI++P     D+P   +YVW DA+  YL+ +      +  PD  + +FW        + 
Sbjct: 236 WGIRVPVEGWRDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWR-EFWNDEDARSYYF 294

Query: 263 IGKDILRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSL 307
           +GKD + FH++ WP  LL  N               L LP ++ S  F+   G K+S S 
Sbjct: 295 MGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEKLGILDLPTEIVSSEFLTMSGSKVSNSR 354

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G  I   + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+R +S
Sbjct: 355 GATIFVGDFLREFGPDALRYFIAIAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRLIS 414

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M  K+  G IP  G  T++D  +L         + E + +     A+ + + +V   + Y
Sbjct: 415 MAFKNCHG-IPAAGELTDADRQLLDASVAGFDVVGELLAHAKFKAAITEAMRIVGLANAY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A++PW+LK  NP+R  TVL+V ++V+  +  +L  F+P  A KI++ L
Sbjct: 474 ISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTMLTPFMPHSAQKIYEAL 522


>gi|295136393|ref|YP_003587069.1| methionyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984408|gb|ADF54873.1| methionyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 695

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 245/513 (47%), Gaps = 39/513 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH   + + AD+ +RF R+ G DV F  G+DEHG  I   A+  GV
Sbjct: 10  ITAALPYTNGPIHIGHLSGVYVPADIYSRFLRMQGHDVAFVCGSDEHGVPITIKAKKEGV 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     +D  +   IS+D++ RT+ + HH T    +KK+ D G   +      
Sbjct: 70  TPQDIVDKYDEIIKDSFNNFGISFDNYSRTSAEIHHKTASAFFKKLYDDGKFIEETTEQL 129

Query: 128 YSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWM--------EE 162
           Y    + +  D            +E Y     + G   NA    NP   +        E 
Sbjct: 130 YDAEAKQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAITGATPTLKET 189

Query: 163 EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + +F  L  Y+  L  +  E H     P     +V S++  GL+  +++R   DWGI +P
Sbjct: 190 KHWFLPLDQYESWLKEWILEGHKSDWKP-NVYGQVKSWIDDGLRARAVTRD-LDWGIPVP 247

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
            +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + FH I 
Sbjct: 248 VEGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDQDTKMVHFIGKDNIVFHCII 307

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331
           +P  L +  +  LP+ V ++ F+  +G+K+S S    +   E +E+     D LRY L  
Sbjct: 308 FPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEDFPGQQDVLRYALTA 367

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + R N +L    GN ++R V +  K Y+G +PTP  +++ DE  +
Sbjct: 368 NAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGEVPTPAEYSKVDEETI 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +        I  +++      A A++++L    ++Y   ++PW+L KT+ +R  T++YV 
Sbjct: 428 AALKAYPAVIASSIEKYRFREAQAELMNLARLGNKYLADEEPWKLVKTDEERTKTIMYVA 487

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +++   LA L + F+P  +NK+ +IL  + E R
Sbjct: 488 LQIASALATLSEPFLPFTSNKLKEILKFSAEER 520


>gi|126662871|ref|ZP_01733870.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126626250|gb|EAZ96939.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 695

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 247/515 (47%), Gaps = 41/515 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + E ++  I+ A+ Y N   HIGH A   + +D+ AR+ RL G DV F  G+DEHG  I+
Sbjct: 12  LSEAKRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLQGKDVAFVCGSDEHGVAIS 71

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+     R       IS+D++ RT+ + HH T    +KK+ D GD 
Sbjct: 72  MKARKEGITPQQVIDKYDGIIRQSFLDFGISFDNYSRTSSEIHHKTASEFFKKLYDNGDF 131

Query: 120 YKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQH--NPVQWM 160
            +      Y  + + +  D                 D+  K   G   NA    NP   +
Sbjct: 132 IEETTEQLYDAKADQFLADRFVTGTCPKCDNPEAYGDQCEKC--GSTLNATDLINPKSTI 189

Query: 161 EEEGYFFRLSAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRK 212
             E    + + +    L+ YES   E+IL   + +       +V S+V  GL+  +++R 
Sbjct: 190 TGETPILKSTKHWFLPLNRYESFLREWILEGHKNDWKPNVYGQVKSWVDGGLEPRAVTRD 249

Query: 213 TFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP-AD---LHVIGK 265
             DWGI +P +      +YVW DA   Y+++T      +G     +W  AD   +H IGK
Sbjct: 250 -LDWGIDVPVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDADTKLVHFIGK 308

Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GV 322
           D + FH I +PA L +  +  LP  V ++ F+  +G K+S S    +   E + +     
Sbjct: 309 DNIVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLLDFPEKQ 368

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D+LRY L       KD  +     + R N +LA   GN ++R V +  K Y+G++P P  
Sbjct: 369 DSLRYALTANAPETKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYNGIVPAPNE 428

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           F+E DE  L+        I  +++      AL +++++    ++Y   ++PW++ K NP 
Sbjct: 429 FSEVDEQTLAELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKENPA 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R  T +YV +++   LA+L + F+P  A K+ +IL
Sbjct: 489 RVQTQMYVALQIASALAVLSEPFLPFTAKKLSNIL 523


>gi|241765107|ref|ZP_04763097.1| methionyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241365258|gb|EER60093.1| methionyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 694

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 235/543 (43%), Gaps = 49/543 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N   HIGH  E I AD+  R  RL G +V F    D HG  I  
Sbjct: 1   MSSARKLFVTTALPYANGNFHIGHIMEYIQADIWVRTQRLLGNEVNFVGADDTHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +   +   D   I +D++  T    +H   + ++  +   G I 
Sbjct: 61  AAEKAGKTPQQFVADIAAGRKQYLDGFHIQFDNWHSTDAPENHQLAQQIYLDLKANGLIE 120

Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWM--------- 160
                 ++      +  D     E  K       G + +   A + P   +         
Sbjct: 121 TRTIEQFFDPEKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAVYAPTDLINPYSALSGA 180

Query: 161 -----EEEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKD 206
                  E +FF+LS     A+ +         PE    +      R         GL D
Sbjct: 181 TPVLKSSEHFFFKLSDPRCVAFLEDWTQNGRLQPEVANKVREWFTVRTNPDGSTSEGLGD 240

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261
             +SR    +GI+IPD P    YVW+DA   YL +   L    G     + AD      H
Sbjct: 241 WDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLLEKRGQNYDAYMADPQLEQYH 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-E 319
            IGKDI+ FH ++WPA L  +   +P  VF HGF+ ++ GEK+SKS G  +DP++ +   
Sbjct: 301 FIGKDIVTFHTLFWPATLKFSGRKVPDSVFVHGFLTVNNGEKMSKSRGTGLDPLKYLGLS 360

Query: 320 VGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +  + LRY+L  +++   +D  ++ D    RVN+DL     N+ SR+   I K + G + 
Sbjct: 361 MNAEWLRYYLATKLSSRNEDIDFNADDFMARVNSDLVGKYINIASRAAGFISKRFGGQL- 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G  +   +++L     V   + E +  +   +AL + + L   V+ Y D  KPWEL K
Sbjct: 420 --GEVSADGDALLDHLRTVAPSVIELLAEREYGKALRETMLLTDRVNAYVDQNKPWELAK 477

Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
                 R   V    +E  R L ILL+  +P LA ++   L V  E   F S    L  G
Sbjct: 478 QEGMEGRLQDVCTTCIEAFRVLTILLKPVLPALAAQVEAFLKV--EPFTFASAQTALGKG 535

Query: 497 FML 499
            ++
Sbjct: 536 HVI 538


>gi|197262435|ref|ZP_03162509.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197240690|gb|EDY23310.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 704

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ T  A    D  
Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 444

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 504

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530


>gi|124485549|ref|YP_001030165.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|187647745|sp|A2SRE2|SYM_METLZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|124363090|gb|ABN06898.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 673

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 41/505 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    I  D   R+ R  G D++F  G+D HG  I   A+    T
Sbjct: 8   VTCGLPYTNGFCHLGHLRTYIPGDFYVRYLRRLGDDIVFICGSDNHGTPIVVTAEAEKTT 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKGDIYKGCYSGW 127
            +   +    +F ++   + I++D F  T +   HH T  IL + + D+G +Y+      
Sbjct: 68  PRAVSETYHAHFDNVFKSMGIAFDRFGMTDDPTNHHRTVSIL-QTLIDRGYVYEQTIQQS 126

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQH-------NPV--------QWMEE 162
           Y  + + +  D  V           +G +      +H       +PV        +  E+
Sbjct: 127 YCPKCKRFLPDRYVEGTCPYCGKHARGDECDSGCGRHLEPGEILDPVCATCGTKAELREQ 186

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + Y+F+LS+++D LL Y    P     +  +N  I +V++ LKD  ++R   DWG+K P 
Sbjct: 187 KHYYFKLSSFRDYLLEYL---PTLGGTLNAKNYAIGWVENELKDWCITR-MMDWGVKFPG 242

Query: 223 DPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFL 279
               + YVW+DA   Y++ T  +    + S  K+W     +H IG DI+  H ++WPA L
Sbjct: 243 SDDLVCYVWVDAPIGYISFTEEWAKATNNSWQKYWCEGDRVHFIGSDIIYHHCVFWPAML 302

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337
             A    P  V + G +   GEK SKS GNV+   E   + G+  D LRY+L+   +  +
Sbjct: 303 HGAGYQPPTAVVASGMVTIDGEKFSKSKGNVVWTKEDYLDKGLPADYLRYYLLAYTSHTR 362

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +  +     + R+N +L N  GN  +RS+S++   +  +   P      +  I +   R 
Sbjct: 363 ELDFSWKEFQARINNELVNTFGNFANRSMSLVKTKFGDVPQVP-----VEAEIFAEIERS 417

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L  I E+++      A+  ++ L +  + Y     PW+L K +P  A+ +L   +++++ 
Sbjct: 418 LAAIEESVRAYEFKAAVDGILLLAAYGNSYISNAAPWKLIKEDPQAAAQILKNCLQIVKA 477

Query: 458 LAILLQAFVPKLANKIFDILFVADE 482
            A+++Q  +P+ + K++++L   D+
Sbjct: 478 CALIMQPVMPESSQKLWEMLGYTDK 502


>gi|329947575|ref|ZP_08294734.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328523890|gb|EGF50970.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 615

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 242/528 (45%), Gaps = 63/528 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +   
Sbjct: 63  EGVSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMAQQVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +         +GA G   +   N +                 ++
Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLIGPRSRINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E   +F  L A    L ++ +   E       R  VI F ++ L D+     T   DWG
Sbjct: 183 VETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLGDIRPRAMTRDIDWG 239

Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266
           I +P   D P   +YVW DA+  YL+ +        +P+  +A +W  P  L  + +GKD
Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGKD 298

Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI 
Sbjct: 299 NIVFHSQIWPAELLGYNGQGESGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIY 358

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K 
Sbjct: 359 VRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G IP PG   ++D ++L         + + +       AL + + LV E ++Y    +
Sbjct: 419 F-GQIPEPGEPQDTDRALLDAVEAGFTSVGDLIAQHRQKAALGEAMRLVGEANKYVADTQ 477

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P++LK  +P+   R +TVL+   +V+  L ++L  F+P  AN +  +L
Sbjct: 478 PFKLKGDDPETQARLATVLHTLAQVVADLNLMLSPFLPHAANDVDRVL 525


>gi|284007101|emb|CBA72376.1| methionyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 675

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 230/505 (45%), Gaps = 46/505 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGKQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+T +  + + N  +  D+AD   ISYD++  T    +      ++  +   G I    
Sbjct: 66  LGITPEEMISKVNQEHQHDLAD-FAISYDNYHSTHSVENKTLSEQIYLTLKKNGFIQSKT 124

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
            S  Y  + E +  D  V             G + +   A +NP + +            
Sbjct: 125 ISQLYDPKQEMFLPDRFVKGSCPKCQAADQYGDNCEVCGATYNPTELINPHSVISGATPE 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+   L ++  S     L  +  N++  + ++GL+   ++R    +G 
Sbjct: 185 MRETEHFFFDLPAFSKMLQTWTRSGA---LQPQVANKMQEWFEAGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDILRFH 271
           +IP++P    YVW+DA   Y+ T   L    PD   A FW  D      H IGKDI+ FH
Sbjct: 242 EIPNEPGKYFYVWLDAPIGYMGTFKNLCEKQPDIDFASFWQQDFTADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG+I   G K+SKS G  I     ++++  D LRY+   
Sbjct: 302 SLFWPAILEGSGYRKPTNIFVHGYITVNGAKMSKSRGTFITARAYLDQLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVN+D+ N + NL +R+   I K +   + +  A  E  +  
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNSDIVNKVVNLAARNAGFINKRFHNKLSSRLAAPELYQQF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TV 447
           ++  +++ QE  +   N    +A+ +++ L    +RY D Q PW + K   DR      +
Sbjct: 422 IAAANKIGQEFCQREYN----KAIREIMLLADLANRYIDEQAPWVVAKQE-DREQDLHDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P L  +
Sbjct: 477 CSMGINLFRVLMTYLKPILPGLTGR 501


>gi|168229505|ref|ZP_02654563.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194472636|ref|ZP_03078620.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194459000|gb|EDX47839.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205335754|gb|EDZ22518.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 677

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ T  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEDRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|296103770|ref|YP_003613916.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058229|gb|ADF62967.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 677

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +  + + S+  +      DISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  LGVSPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSEENRELSTLIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     + E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 478 CTMGLNMFRVLMTWLKPVLPQLAAR 502


>gi|89092515|ref|ZP_01165468.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083027|gb|EAR62246.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 679

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 251/545 (46%), Gaps = 60/545 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I   A   
Sbjct: 7   KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKQRGHQCTYVCADDAHGTPIMLKADQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++ +  +D+ S+   RD +  + + +D++  T  + +     +++  + D G I K   
Sbjct: 67  GISPQELIDKVSQEHQRDFSGFM-VGFDNYYSTHSEENQHFASLIYTALRDGGHIAKKTI 125

Query: 125 SGWYSLRDEAYYND----DEVYKGADGQYYN-------AQHNPVQWM------------- 160
           +  Y    E +  D     E  K  +   Y        A ++PV+               
Sbjct: 126 TQAYDPEKEMFLPDRFVKGECPKCGEPDQYGDSCEKCGATYSPVELKNAYSAVSGAKPIE 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L  ++  L ++ ++H +  + I + NE   + ++GL++  +SR    WG +
Sbjct: 186 KESEHYFFKLGDFEGFLRNWVDNHVQEQM-IHKLNE---WFEAGLQNWDISRDAPYWGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWP----ADL-HVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   + D    +  ++W     A+L H IGKDI  FH +
Sbjct: 242 IPDAPGKYFYVWLDAPIGYMASFKNWCDKNGANFDEYWSESSNAELYHFIGKDIAYFHTL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 302 FWPAMLEGAGFRKPNGVFCHGFLTVDGQKMSKSRGTFIMAETYLNHLRPEYLRYYFAAKL 361

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDE 388
           + G D    + +  + RVNADL N + N+ SR    I K +DG + +    P  +TE+  
Sbjct: 362 SSGIDDIDLNLEDFRMRVNADLVNKVINIASRCAGFIKKKFDGELASQLVEPELYTEAVA 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           +  S+ S          +N+   +A+ +++++  + ++Y DA +PW L K          
Sbjct: 422 AGESIASA--------YENREYGKAMREIMAIADKANQYIDAAEPWVLAKQEGKEQEVQD 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFD 504
              + + + R +   L   +PK+A       F+A ++  + S+ Q L    + HK   F 
Sbjct: 474 CCTMGINLFRVILTYLAPVLPKVAEDA--QAFLAVDDLAWNSIQQPL----LSHKINKFK 527

Query: 505 PIFPR 509
           P+  R
Sbjct: 528 PLMQR 532


>gi|315126748|ref|YP_004068751.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015262|gb|ADT68600.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 674

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 231/505 (45%), Gaps = 43/505 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  V   S    RD AD  +I +D++  T  + + +   +++ +++D G I K 
Sbjct: 63  KQGITPEEMVKNVSIERQRDFAD-FNIKFDNYHSTHSQENKEFSELIYNRLNDAGHIKKH 121

Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G       A ++P + +           
Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSEDQNGDSCDACGATYSPTELINPRSVMSGAEP 181

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E YFF L A++D L  +  S     +  E  N++  +   GL+   +SR    +G
Sbjct: 182 ILKDSEHYFFDLPAFEDMLKEWLHSG---TIQQEMANKLDEWFADGLQQWDISRDAPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFH 271
            +IP+ P    YVW+DA   Y+ +   L +  G     FW     A+L H IGKDI+ FH
Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKQGIDFDAFWQEGSDAELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF+HGF+   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 299 SLFWPAMLEGAQFRKPTNVFAHGFVTVNGAKMSKSKGTFIKARTYLDNLDPEFLRYYYAA 358

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++  G  D   + +   +RVN+DL   + N+ SR    I K +DG +      T     +
Sbjct: 359 KLNSGITDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSN----TVMQPQL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448
           L+        I E  +N+   RA+ ++++L  + +++ D   PW L K  +  + A  V 
Sbjct: 415 LAEFQNASATITEYYENREYSRAIREIMALADKANQFIDNAAPWVLIKDESKQEEAHQVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473
            + + + R L   L+  +P +A+ +
Sbjct: 475 SLGLNLFRVLITYLKPVLPGMASNV 499


>gi|238912598|ref|ZP_04656435.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 677

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ T  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLATELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|170767164|ref|ZP_02901617.1| methionyl tRNA synthetase [Escherichia albertii TW07627]
 gi|170123498|gb|EDS92429.1| methionyl tRNA synthetase [Escherichia albertii TW07627]
          Length = 677

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR    I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRCAGFINKRFDGVL----AGELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P L  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPNLTER 502


>gi|238583385|ref|XP_002390224.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
 gi|215453394|gb|EEB91154.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
          Length = 282

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 148/251 (58%), Gaps = 14/251 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAK 60
           E +  Y +T I YPNA PHIGH Y ++ ADV AR+ RL   G+ V F TGTDEHG KI K
Sbjct: 22  EVKPWYTTTPIFYPNAVPHIGHLYSLVTADVFARYQRLKNPGIPVRFVTGTDEHGLKIQK 81

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+  K F DQ S  FR ++ V D++Y  F+RT+++ H+ + + +W+++  +G IY
Sbjct: 82  AATAKGMQPKEFCDQTSEKFRRLSSVADVTYTTFVRTSDEVHYKSVQQIWRELDAQGLIY 141

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHN-PVQWMEEE---GYFFRLSAY 172
           KG YSGWYS+ DE +Y D ++ +     Y    Y+ Q N    W   +     F  L + 
Sbjct: 142 KGSYSGWYSVTDECFYTDSQITRSPGNTYLSVTYDIQRNRRYCWNTAQRPTTCFASLPSE 201

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKS-GLKDLSLS--RKTFDWGIKIPDDPQYIMY 229
           +D LL +Y S    I P   R  VI  +++  L+D+S+S  R    WGI +P DP + +Y
Sbjct: 202 KD-LLEHYRSDENSIFPQSYRLNVIRTLETETLEDISISRPRSRLTWGIPVPGDPDHTVY 260

Query: 230 VWIDALTNYLT 240
           VW+DAL +YLT
Sbjct: 261 VWVDALISYLT 271


>gi|119715622|ref|YP_922587.1| methionyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|187647738|sp|A1SGG5|SYM_NOCSJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119536283|gb|ABL80900.1| methionyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 595

 Score =  190 bits (483), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 244/523 (46%), Gaps = 65/523 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +G+DEHG  I  AA  A
Sbjct: 4   VLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILIAADEA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +   D+N R   +    L ++YD + RTT + HH   + L+  + + G   +    
Sbjct: 64  GLSPQELADRNHRIIAEDLASLGLTYDLYTRTTTRNHHAVVQELFLGVYENGYFVEQTTY 123

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160
           G  S        D  +        Y GA G   +   N +                 +++
Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPHDLIDPRSKINGETPEFI 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E + +F  L A  + L  + +      L    R  VI F ++ LK++     T   DWGI
Sbjct: 184 ETQHFFLDLPALAEALGEWLDGREATGL---WRPNVIRFSQNILKEIRPRAMTRDIDWGI 240

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD-----LHVIG 264
            +P     ++P   +YVW DA+  YL+ +      LD PD  + + W  D      + +G
Sbjct: 241 AVPLDGWRENPTKRLYVWFDAVIGYLSASIEWARRLDEPD--RWRDWWNDPDALSYYFMG 298

Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA LL+                L LP +V S  F+  +G K S S   V
Sbjct: 299 KDNITFHSQIWPAELLAYSGKGAKGGTPRQYGELNLPTEVVSSEFLTMEGRKFSSSKRVV 358

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +++     DA RYF+       +D  +      +R N +L  G GNLV+R+ ++I 
Sbjct: 359 IYVRDLLSRYQPDAFRYFVAAAGPENQDSDFTWSEFVRRTNDELVAGWGNLVNRTANLIA 418

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++ G IP  G  T +D+++L   +     + + +      +A+ + +  V+EV++Y   
Sbjct: 419 KNF-GEIPKAGELTAADQALLDSVASAFGVVGDLIGRHRQKQAIGEAMRAVAEVNKYVSD 477

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +PW++K  +PDR  T+L+V  + +  L ++L  F+P  AN++
Sbjct: 478 TEPWKIKD-DPDRLGTILHVVAQCVADLNLILSPFLPFAANEV 519


>gi|74312632|ref|YP_311051.1| methionyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|123745978|sp|Q3Z096|SYM_SHISS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|73856109|gb|AAZ88816.1| methionine tRNA synthetase [Shigella sonnei Ss046]
 gi|323168762|gb|EFZ54442.1| methionyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 677

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +       F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|323144943|ref|ZP_08079504.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415282|gb|EFY06055.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 674

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 227/505 (44%), Gaps = 41/505 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I +D+  RF R  G +V +    D HG  +   A   G
Sbjct: 1   MLVTSALPYANGPIHLGHMLEHIQSDIFVRFQRAVGNNVYYVCADDCHGTPVMIKAGQMG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  + Q  +  +   D   I+YD++ RT  + +    + ++KK+ DKG I     S 
Sbjct: 61  ITPEELILQVGKEHKQDFDDFLINYDNYYRTHSEENRIFSQSIYKKLRDKGFITTKTISQ 120

Query: 127 WYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ--------------WME 161
            Y      +  D  V       GA  QY       +A +NP                  E
Sbjct: 121 LYDPEKNMFLPDRFVKGTCPKCGAPDQYGDNCEVCSATYNPTDLKNPYSTISGATPVLKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              YFF L  ++D L  Y  S    +LP E  N++  +   GLKD  +SR    +G +IP
Sbjct: 181 SLHYFFDLPKFKDFLHDYINSG---VLPKEMANKLEEWFAQGLKDWDISRDAPYFGFEIP 237

Query: 222 DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +   + D        FW  D      H IGKDIL FH+++W
Sbjct: 238 DAENKYFYVWLDAPIGYMASFKNFCDKNGIDFDAFWNKDSDKELYHFIGKDILYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  ++  LP  +F HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PATLKGSDHRLPTGIFVHGYVTVNGAKMSKSKGTFIKASTYLKHLKPECLRYYFASKMNN 357

Query: 336 -GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D     D    +VN+D+   + NL SR+   I K ++GM+    A   +D +++   
Sbjct: 358 QAVDLDLALDDFVAKVNSDIVGKVVNLASRTAGFINKRFNGML----ADKPNDPALMEKF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTV 452
           +  + EI++    +    A+  ++SL  E +RY DA  PW + K     ++   V    +
Sbjct: 414 AAAMPEIKQAYDCRNYSDAVRAIMSLADEANRYIDAMAPWVIAKQEGQDEKLQAVCTDGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
              + L   L   +P++  K  ++L
Sbjct: 474 NCFKALITYLSPILPEVYLKAKELL 498


>gi|170289693|ref|YP_001736509.1| methionyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|229558153|sp|B1L7J9|SYM_KORCO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|170173773|gb|ACB06826.1| methionyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 559

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 244/513 (47%), Gaps = 46/513 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +++A  Y NA PH+G   +++ +DV ARF R  G +V+F +G+DEHG  I   A   G+ 
Sbjct: 5   VASAWPYINAVPHLGTLVQVLSSDVFARFLRKMGEEVVFVSGSDEHGTPIEIEAIRKGIA 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+       + +   ISYD++ RT    H +  R  + K+ ++G I++      Y
Sbjct: 65  PRDLTDKMHAYITWLFESFGISYDNYTRTESDVHKEFVRDFYLKVYNEGHIFERETEQLY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEEG------------- 164
             +DE +  D  V        Y   H           NP   ++ +              
Sbjct: 125 CPKDEMFLPDRFVTGTCPYCGYERAHGDQCDRCGRLLNPTDLIDPKCSICGSVPEMRRTK 184

Query: 165 -YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIP 221
            +FF L  + ++L  Y E +    LP   +   +S ++ GL+  SL+R    WGI    P
Sbjct: 185 HWFFDLPKFSERLRKYIEENEN--LPENAKTLSLSMIEEGLRPRSLTRDN-KWGIPAPFP 241

Query: 222 DDPQYIMYVWIDALTNYLTTTG--YLDNPDGSK-AKFWPA----DLHVIGKDILRFHAIY 274
                 +YVW++A+  Y++     +L   +  +  +FW +     ++ IGKD + FH I 
Sbjct: 242 GSEGKTIYVWMEAVLGYVSAVKEYFLKRGEAERFEEFWKSGDTRSVYFIGKDNIPFHTII 301

Query: 275 WPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +PA L+++     LP  V S  F+L++GEK SKS    I   E ++ +  D  R++++  
Sbjct: 302 FPALLMASGEGYALPFSVASTEFLLYEGEKFSKSERRGIWMDEALQLLPADYWRFYMIYM 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +  +  + +VN +L + IGNLV R +S I   Y G IP+     E DE    
Sbjct: 362 RPELKDASFSWEDFESKVNDELNDTIGNLVHRILSFIASRYSGQIPS----VELDEEASG 417

Query: 393 VCSRVLQ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
              RV +   EI EN+    +  AL  +I +    +++F+ ++PW+  ++N  RA + + 
Sbjct: 418 FLMRVREIGREIEENLMKIKLRDALRSLIEMARLGNKFFNNREPWKDFESNRGRADSTIL 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +  +++ LA  +  F+P  A K++ +L +  E
Sbjct: 478 ASYILLKILAFYMHIFMPSSAEKLWKMLGLEGE 510


>gi|289192151|ref|YP_003458092.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938601|gb|ADC69356.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 650

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 244/500 (48%), Gaps = 41/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+AY N   H+GHA    I AD++ ++ +L G DV+   GTD HG  I   A+  G 
Sbjct: 5   ITTALAYTNGPLHLGHARSTYIPADIMYKYLKLKGEDVIHVGGTDNHGVPITLTAEKEGK 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  V++     ++  D+L I +D F +T  + H +T +  + K+ + G IY+     +
Sbjct: 65  SPEEIVEKYHNEIKEDLDLLGIEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQ-----------HNPV--------QWMEEE 163
           Y  + + +  D  V     Y G + +  + +            NP         +  + +
Sbjct: 125 YCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKNPYCVICKGKPEIRKTK 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LSA + +L  Y ++  E  +P   +N  ++++K  L D  +SR    WG+ IP  
Sbjct: 185 HYFFKLSALKKELEEYIKNAEE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279
            Q +MYVW++A   Y++ T  L +      K+W        H IGKDI   HA++WP  L
Sbjct: 241 NQ-VMYVWLEAPIGYISFTKMLGD---VWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           ++  +  LP  V S G++  +G K+S S   V+   + ++    D LRY+L+      KD
Sbjct: 297 IAHGSFNLPTAVVSGGYLTLEGRKMSTSKKWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  + I       + D+++L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDENRLKDEDKALLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ + +N+++     AL  ++ L  E + YF   +PW +   +  R   +LY   + ++ 
Sbjct: 417 IEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--NDEKRLEEILYTCCKAVKT 474

Query: 458 LAILLQAFVPKLANKIFDIL 477
           +  LL  ++PK + ++ +++
Sbjct: 475 IIYLLYPYMPKKSLELLNLM 494


>gi|254168303|ref|ZP_04875149.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622812|gb|EDY35381.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 750

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 255/522 (48%), Gaps = 52/522 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++I  A  Y N   H+GH   AY  + AD+ AR+ R+ G +VL  +G+DEHG  I   A
Sbjct: 18  RIFIGVAWPYANGPIHLGHIVGAY--LPADIFARYQRMQGNEVLMVSGSDEHGTPITITA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G + +   D+  +   ++ + L IS+D + RT+   H    +  + ++ + G +YK 
Sbjct: 76  EKEGKSPQEIADRYHKINSEVMEKLGISFDLYFRTSHPNHEKIVKDFFLRLWENGYLYKK 135

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPV 157
                Y  + + +  D  V        Y+ A G Q  N                    P 
Sbjct: 136 KMLLPYCPQCKRFLPDRYVVGTCPYCGYENAHGDQCDNCGRMLDPKDLINPRCVICGTPT 195

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSRKT 213
           ++ E E  FF LS  +  +L + E    +      R+ VI    +FVK GLKD +++R  
Sbjct: 196 EFRETEHIFFALSKLEGTILKWLEDKTYW------RDNVIKFTRNFVKGGLKDRAITR-D 248

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKD 266
            +WG+++P +      +YVW DA+  YL+ +  +    +     FW  +     + +GKD
Sbjct: 249 LEWGVEVPLEGFENKRIYVWFDAVIGYLSASIEWAKRNNKDWEVFWKDENTRHYYFLGKD 308

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            + FH I WPA L++   L LP  V ++ ++   GEK SKS G  +   E++E    D +
Sbjct: 309 NIPFHTIIWPAMLMAHEGLNLPYNVVANEYLRFSGEKFSKSRGIGVWMPELLENFHPDII 368

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++    +   +D  +  D   ++VN +L +   N V R++    +++ G +P  G   E
Sbjct: 369 RFYGTVNMPESRDSDFTWDDFVQKVNEELIDKFANFVHRALIFAYRNF-GEVPPRGDIDE 427

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   + +  + ++++ E M++  + +A  + ++L    + YFD + PW L K + ++ +
Sbjct: 428 VDREAIKLIMQTMKKMNEYMESVELKKAFKEWLNLARYGNVYFDRKAPWALCKEDREKCA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           T + +++++++ LAIL   F+P  + +I+   F+ +E+  FQ
Sbjct: 488 TAINISLQIVQALAILGAPFLPFTSERIWK--FLGNEDSIFQ 527


>gi|227538486|ref|ZP_03968535.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241672|gb|EEI91687.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 689

 Score =  190 bits (482), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 259/540 (47%), Gaps = 42/540 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++++  I++A+ Y N   HIGH A   I  D+  R+ RL+  DV++  G+DEHG  I 
Sbjct: 3   ITDKKRYTITSALPYANGPLHIGHLAGAYIPGDIFVRYLRLNQKDVVYVCGSDEHGAAIT 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+ ++  ++  +   IS+D + RT+E  HH   +  +  +  KG+ 
Sbjct: 63  IKAKKEGITPREIIDKYNQQIKESFEEFGISFDIYHRTSEPIHHQLSQEFFLNLYHKGEF 122

Query: 120 YKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM-- 160
            +     +Y      +  D                 D+  K           NP+  +  
Sbjct: 123 IERFSEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKCGTSLSPTDLINPISTLSG 182

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  YQ  L  +     +  L      + +S++KSGL+  S++R   
Sbjct: 183 KTPVLKETKHWYLPLDKYQPWLEKWLIEGKKDELKSNVYGQCLSWLKSGLQPRSMTRD-L 241

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGY--LDN----PDGSKAKFWPAD----LHV 262
           DWG+ +P  +     +YVW+DA   Y++ T    LDN     D  K +  P D    +H 
Sbjct: 242 DWGVDVPLEEAEGKKLYVWLDAPIGYISATKQWALDNGKNWEDYWKEQPDPEDNSCLIHF 301

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH I +PA L +  +  LP+ + ++ F+  +G+K+S S  + +   E +EE  
Sbjct: 302 IGKDNIVFHCIIFPAILHAHGDYILPENIPANEFLNLEGDKLSTSRNHAVWLHEYLEEFP 361

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L   +    D  +     + R+N +L   +GN ++R + +  K +DG I +
Sbjct: 362 GKQDELRYVLTSILPETSDSEFTWKDFQARINNELVAILGNFINRVMVLSHKYFDGKILS 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                E D+ + +   +  ++I +++       ALAQ +++    ++Y    +PW++ KT
Sbjct: 422 GSDLQEEDQQVFAELKKYPEQITQSINQYRFREALAQFMNVARLGNKYLADAEPWKVIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + +R  TVL V++++   LAIL Q F+PK A K+F++L +  ++      +  LK G  L
Sbjct: 482 DEERVKTVLNVSLQIAANLAILAQPFLPKTATKLFEMLNLPQQDWKGAGQEDLLKDGHEL 541


>gi|220931388|ref|YP_002508296.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782868|sp|B8D274|SYM_HALOH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219992698|gb|ACL69301.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 540

 Score =  190 bits (482), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 242/506 (47%), Gaps = 46/506 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR+ RL G  VL+ +G+D HG  IA  A+  G
Sbjct: 3   VFIGGAWPYANGSLHLGHIASLLPGDILARYFRLKGEKVLYVSGSDCHGTPIALRAKREG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + ++  ++  + F+     L  SYD++ +T    HH   + + KK+ +KG IYK     
Sbjct: 63  ESPRIIAERYHQEFKKTFTKLGFSYDNYTKTDNPFHHQVVQSIIKKLFEKGYIYKKQTKQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y  + + +  D           +V +G    Y ++   P    E+              
Sbjct: 123 LYCSKCQQFLPDRYVEGICPVCGKVVRGDQCDYCSSLIEPTDLEEKRCKICGSSPVIKNT 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGIK 219
           E ++  LS + D+L    +++  +     R N +     +++ GL+D +++R   +WG+ 
Sbjct: 183 EHFYLALSEFSDELKRLLDNNRGW-----RDNAIKLSTRYIEEGLQDRAITR-DLNWGVS 236

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDILRFHAI 273
           IP +   +  +YVWIDA+  YL+ +       G     FW  D    +V GKD + FH +
Sbjct: 237 IPFEGYEEKRIYVWIDAVLGYLSASKEWSRHTGEPWQNFWSEDTKTYYVHGKDNIPFHTL 296

Query: 274 YWPAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             PA L  A +  +P+K+ S  ++  +G+K+S S    +   ++++    D++RYFL+  
Sbjct: 297 ILPALLRGAGIKQIPEKIVSSEYLTIEGKKLSTSRNWAVWLPDMLKNYQPDSIRYFLIIN 356

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +  +      N +L    GN V+R++  I K Y+G+IP      +  E I +
Sbjct: 357 GPEKKDSNFSWEEFIHSHNGELLGAYGNFVNRTLVFIEKYYNGLIPDGKLNEKIKEKIET 416

Query: 393 VCSRVLQEI-RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +  RV  +I + N++N     AL  + + V E ++YFD+++PW   K +       +Y  
Sbjct: 417 LYHRVGNKIEKTNLKN-----ALEVIFNFVREANKYFDSEEPWITVKEDKGTCKDTIYTC 471

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           V++I  L  LL  F+P  + K+   L
Sbjct: 472 VQIIANLTNLLSPFLPFSSKKVRGFL 497


>gi|331663606|ref|ZP_08364516.1| methionine--tRNA ligase [Escherichia coli TA143]
 gi|331059405|gb|EGI31382.1| methionine--tRNA ligase [Escherichia coli TA143]
          Length = 680

 Score =  190 bits (482), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +       F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVSFDEYWKKDSTAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPKLTER 505


>gi|300123023|emb|CBK24030.2| Methionyl-tRNA synthetase [Blastocystis hominis]
          Length = 358

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 166/317 (52%), Gaps = 21/317 (6%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +ST I Y N +PH+GH Y   +AD + R+ ++ G     TTGTDEHGQK+ K A+   + 
Sbjct: 32  VSTPIYYVNGEPHLGHIYSTALADAICRWEQMKGKSTFLTTGTDEHGQKVQKEAEKKHME 91

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K + D  +  F+      D+    FIRTT+  H D    +W ++   GD+Y+  Y G+Y
Sbjct: 92  VKNYCDSIASVFQSELSHYDLQLGRFIRTTDPDHVDLVHQVWNELQRNGDLYEASYRGYY 151

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR------LSAYQDKLLSYYES 182
              DEA+  + ++Y+    ++     NPV+ +EE  + FR       +       S   S
Sbjct: 152 CRSDEAFLTESQIYEENGQKFSKESRNPVELVEERNWMFRRLYWRFCAPIATGWSSARSS 211

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           H + I+P    N +I  ++   +DLS+SR      W I +  D +  +YVWIDALTNYLT
Sbjct: 212 HAQ-IVPSSCFNSMIRTIEESAQDLSVSRPLSRVPWAIDV--DGRDGVYVWIDALTNYLT 268

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           T         S+ + + + LHV GKDI +FH  ++P  LL+ +  LP ++  H      G
Sbjct: 269 T---------SETRSFDSVLHVFGKDIAKFHCYFYPCLLLALHRKLPDRMICHSHWTVNG 319

Query: 301 EKISKSLGNVIDPIEVI 317
            K+SKS GN + P++ +
Sbjct: 320 TKMSKSKGNYV-PLQAL 335


>gi|77164486|ref|YP_343011.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433423|ref|ZP_05046931.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123594665|sp|Q3JCG5|SYM_NITOC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76882800|gb|ABA57481.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089756|gb|EDZ67027.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 674

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 232/507 (45%), Gaps = 53/507 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF R+ G +  +    D HG  I   AQ  
Sbjct: 4   RILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMRGHECYYVCADDAHGTPIMLRAQQE 63

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI----- 119
           GVT +  +DQ S+  + D AD   IS+D +  T    +      ++ +  DKG I     
Sbjct: 64  GVTPETLIDQCSQEHQADFAD-FAISFDSYHSTHSAENRTLSETIYLRNRDKGHITTRIV 122

Query: 120 ------YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW-------------- 159
                  KG +     +R      D     G + +   A ++P +               
Sbjct: 123 RQAYDPVKGMFLPDRFIRGTCPRCDALDQYGDNCEVCGATYSPTELKEAISVLSGTPPIE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L+ ++  L  + +      L  E  N++  + ++GL+D  +SR    +G  
Sbjct: 183 RESEHYFFKLNDFEPLLKRWTQGGH---LQPEMANKLNEWFEAGLQDWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLHVIGKDILR 269
           IP+      YVW+DA   YL +  +L + +G          S A+ +    H IGKDIL 
Sbjct: 240 IPESTDKYFYVWLDAPIGYLASFKHLCDREGLDFDSFMTPHSTAELY----HFIGKDILY 295

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A   LP  +F+HGF+   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 296 FHALFWPAMLHGAGFRLPTAIFAHGFLTVNGQKMSKSRGTFIKARTYLKHLNPEYLRYYF 355

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++  G +D   + D    RVNADL   + N+ SR    I K +   +    A    ++
Sbjct: 356 AAKLGSGIEDLDLNFDDFMSRVNADLVGKVINIASRCAGFINKHFQNRL----ADRLVEK 411

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           S+        + + ++ + +    A+ ++++L  + +RY D Q+PW   K +P+R   V 
Sbjct: 412 SLFQKFVAASEHLAQHYEAREFGHAMREIMALADQANRYIDEQQPWVAIK-DPERKQEVQ 470

Query: 449 YVT---VEVIRQLAILLQAFVPKLANK 472
            V    + + RQL I L+  +P    K
Sbjct: 471 EVCTLGLNLFRQLMIYLKPVLPMTTEK 497


>gi|159905012|ref|YP_001548674.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886505|gb|ABX01442.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 663

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 225/500 (45%), Gaps = 50/500 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL G +V+   GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L++S+D F RT    H  T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIKTAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM-------------- 160
             +Y  + + Y  D  V           +G   +       P + +              
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE  +P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPE--MPEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271
           P     +MYVWI+A   Y++ T          +L+N D SK        H IGKDI   H
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDVWKSYWLENTDNSKIS------HFIGKDITVHH 291

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A++WP  L       +P  V S G++  + +K+S S   V+   + IE    D LRYF +
Sbjct: 292 AVFWPGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFM 351

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDE 388
                 +D  +  D  +KR+N +L + IGN   R++    + + G  P        + D+
Sbjct: 352 INAPLNRDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKF-GSTPVVDLNQLKDEDK 410

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            ++S C      +   ++      AL ++I L  + + YF    PW +K  + +R   V+
Sbjct: 411 KLISKCEDTSNRVDSLIREYNFKDALMEIILLAKDGNAYFQGMAPWAIK--DEERLKEVM 468

Query: 449 YVTVEVIRQLAILLQAFVPK 468
           Y     ++ +  LL +F+P+
Sbjct: 469 YTCSVALKYIIYLLSSFMPE 488


>gi|145593338|ref|YP_001157635.1| methionyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|187647767|sp|A4X307|SYM_SALTO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145302675|gb|ABP53257.1| methionyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 603

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 238/532 (44%), Gaps = 68/532 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 6   HVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMAGHDVLMVSGTDEHGTPIQVQADA 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+ +R        L ++YD F RTT   H+   + L++ +   G I     
Sbjct: 66  EGVTPRELADRYNRVIVADLHGLGLTYDLFTRTTTGNHYAVVQELFEGMYRNGYIVSKTT 125

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159
            G  S        D  +        Y+ A G   ++   Q +P+              ++
Sbjct: 126 MGAISPSTGRTLPDRYIEGTCPICGYESARGDQCDSCGNQLDPIDLRNPKSKINGETPKF 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           +E E +F  L A    L  + ++   +      R  V+ F K+ L DL     T D  WG
Sbjct: 186 VETEHFFLDLPALAGVLGQWLDTREGW------RPNVLRFSKNLLDDLQPRAITRDLEWG 239

Query: 218 IKIPDDP-----QYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADL--------H 261
           + IP D         +YVW DA+  YL+ +       G      ++W AD         +
Sbjct: 240 VPIPLDGWRERGDKRIYVWFDAVIGYLSASIEWARRSGDPQAWRRWWSADGPGKDAPSHY 299

Query: 262 VIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSL 307
            +GKD + FH++ WPA L                  L LP +V S  F+  +G K S S 
Sbjct: 300 FMGKDNIVFHSVIWPALLAGYSGEGSHDGQPGELGRLNLPTEVVSSEFLTMEGRKFSSSR 359

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+RS+S
Sbjct: 360 RVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSIS 419

Query: 368 MILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           M  K++  + P  P   TE+DE++L+V       + E +      +A+ + + +V+E +R
Sbjct: 420 MAAKNFGAIPPVDPAGLTEADETLLAVARAGFDTVGELIGRHRQKQAIGEAMKVVAEANR 479

Query: 427 YFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y   Q PW+LK + +  R  TVL+V ++V+     LL  F+P  A KI  +L
Sbjct: 480 YLSEQAPWKLKGEADRPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHQLL 531


>gi|120437425|ref|YP_863111.1| methionyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|187647722|sp|A0M5Z9|SYM_GRAFK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117579575|emb|CAL68044.1| methionyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 691

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 247/518 (47%), Gaps = 37/518 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+ A+ Y N   HIGH A   + AD+ +RF R+ G DV F  G+DEHG  I  
Sbjct: 3   KNPQRFTITAALPYTNGPIHIGHLAGVYVPADIYSRFLRMQGYDVAFVCGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+ +   +   +   I++D++ RT+ K HHDT    +KK+ + G   
Sbjct: 63  KAKKEGVTPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFI 122

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWM--- 160
           +      Y      +  D            +E Y     + G   NA    NP   +   
Sbjct: 123 EESTEQLYDEEAGQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAITGA 182

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E   +F  L  Y+D L  +     +         +V S++  GL+  +++R   D
Sbjct: 183 VPTLKETRHWFLPLDQYEDFLKEWILKGHKSDWKSNVYGQVKSWIDDGLRARAVTRD-LD 241

Query: 216 WGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDIL 268
           WGI +P +     ++YVW DA   Y+++T      +G   + +W  +    +H IGKD +
Sbjct: 242 WGIPVPVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDENTKLVHFIGKDNI 301

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +P  L +  +  LP+ V ++ F+  +G+K+S S    +   E +EE     D L
Sbjct: 302 VFHCIIFPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVL 361

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN ++R V +  K Y+G++P PGA++E
Sbjct: 362 RYVLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGIVPEPGAYSE 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            DE  ++        I  +++      A  ++++L    ++Y   ++PW+L KT+ +R  
Sbjct: 422 IDEKTIAELKAYPSVIASSIERYRFREAQGELMNLARLGNKYLADEEPWKLIKTDEERVK 481

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           T++YV +++   L+I+ + F+P  + K+  +L   DE+
Sbjct: 482 TIMYVALQIASALSIISEPFLPFTSAKLKKMLNHVDES 519


>gi|299531413|ref|ZP_07044821.1| methionyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720576|gb|EFI61525.1| methionyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 715

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 238/524 (45%), Gaps = 50/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 5   KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKKAGFIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
            ++   ++  +  D   KG      A  QY +               NP   +       
Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183

Query: 162 --EEGYFFRLSAYQD-KLLSYYESH-----PEFILPIER----RNEVISFVKSGLKDLSL 209
              E +FF+LS  +  + L+ +  +     PE    I+     R         GL D  +
Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQNGKHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPDLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P ++  HGF+ ++ GEK+SKS G  +DP++ +  ++  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363

Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   I K +DG +   G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDGRL---G 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTN 440
             +E  +++L+        I    + +   RA  +++ L  +V+ Y DA KPWEL KK  
Sbjct: 421 VVSEDGQTLLAALREQQAAIVAAYEGRDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D R   V    +E  R L I L   +P +A ++   L V  EN
Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVASFLIVPPEN 524


>gi|306817226|ref|ZP_07450973.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304650028|gb|EFM47306.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 604

 Score =  189 bits (481), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 242/524 (46%), Gaps = 58/524 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     I +DV +R+ R+ G +VL  +GTDEHG  I   A+ 
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+N+R   +    L +SYD F RTT   H+   R +++ + D G +     
Sbjct: 63  EGLTPRQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQIVRAMFEVVRDNGYMLVQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +         +GA G   +A  N +                 ++
Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E E YF  L A  + L  + +   E       R  VI F K+ LK++     T   DWG
Sbjct: 183 VETEHYFLDLPALAEALTKWLD---EREATGTWRPNVIKFSKNFLKEIKPRAMTRDIDWG 239

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268
           I IP  +D    +YVW DA+  YL+ +       G      K+W  P  L  + +GKD +
Sbjct: 240 IPIPGWEDQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNI 299

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WPA LL  N              L LP +V S  F+  +G+K + S G VI   
Sbjct: 300 VFHSQIWPAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVR 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++E   VDALRYF+       +D  +      +R N +L    GNLV+R+ +MI K + 
Sbjct: 360 DMLERYQVDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRF- 418

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP  G     D+ +L + +     +   ++      AL +V+ LV E +RY    +P+
Sbjct: 419 GEIPPAGKLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPF 478

Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LK ++  +R  T+L+V  +V+  L  ++  F+P   N I  +L
Sbjct: 479 KLKDESQRNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVL 522


>gi|62128373|gb|AAX66076.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715215|gb|EFZ06786.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|326628382|gb|EGE34725.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 704

 Score =  189 bits (481), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 444

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 504

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530


>gi|296128709|ref|YP_003635959.1| methionyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020524|gb|ADG73760.1| methionyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 595

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 244/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I +A+A+P  N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVQADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R   +    L +SYD F RTT + H+   + +++ +   G + +    
Sbjct: 64  GVSAQELADRYNRVIVEDLTQLGLSYDLFTRTTTRNHYAVVQEMFRTVHRNGYMVERTTM 123

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160
           G  S        D  +        Y GA G   +   N +                 +++
Sbjct: 124 GAVSPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAIELKNPRSRINGETPRFV 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E   +F  L A+ D L  +  +   +      R  V+ F  + L D+     T   DWGI
Sbjct: 184 ESNHFFLDLPAFVDALGDWLRARDGW------RPNVLKFSLNLLDDVRPRAMTRDIDWGI 237

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGK 265
            +P     D+P   +YVW DA+  YL+ +        +PD  + ++W  P  L  + +GK
Sbjct: 238 PVPLEGWEDNPSKRLYVWFDAVIGYLSASIEWARRSGDPDAWR-QWWNDPEALSYYFMGK 296

Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WPA LL                +L LP +V S  F+  +G++ S S G VI
Sbjct: 297 DNITFHSQIWPAELLGYDGKGARGGEPGAFGSLNLPTEVVSSEFLNVEGKQFSTSRGVVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++     DALRY++       +D  +     K+R N +L  G GNLV+R+ SM+ K
Sbjct: 357 LVRDMLARYQPDALRYYISVAGPETQDVDFTWAEFKRRTNDELVAGWGNLVNRTASMVHK 416

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++ G IPTPG     D  + +  +     + E +      +AL + + +V+E +RY    
Sbjct: 417 NF-GEIPTPGELQPVDVELNAQVAAAFGRVGELVGAHRQRQALQEAMRVVTEANRYVSET 475

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW+L KT+ DR +TVL+ T + +  L  LL  F+P  A  + + L
Sbjct: 476 EPWKL-KTDRDRLATVLHTTTQAVSDLNTLLAPFLPHSAQAVHEAL 520


>gi|187649780|sp|A9MKV0|SYM_SALAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +     +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMRHEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|86130965|ref|ZP_01049564.1| Methionyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818376|gb|EAQ39536.1| Methionyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 695

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 235/519 (45%), Gaps = 42/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DV F  G+DEHG  I   A+
Sbjct: 6   QRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGADVAFICGSDEHGVPITIKAK 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+ +   +   +   I++D++ RT+ K HHDT    +K + D+G   +  
Sbjct: 66  KEGVTPQDVVDKYNAIIKKSFEDFGITFDNYSRTSAKIHHDTASEFFKNMYDQGKFIEET 125

Query: 124 YSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM----------- 160
               Y      +  D            +E Y G   +     HN    +           
Sbjct: 126 NEQLYDAEANQFLADRFVTGTCPKCGYEEAY-GDQCESCGTSHNATDLINPKSAITGAVP 184

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E + +F  L  Y D    +     +         +  S++  GL+  +++R   DWG
Sbjct: 185 TLKETKHWFLPLDQYNDFFKEWIIKGHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-LDWG 243

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRF 270
           I IP +     ++YVW DA   Y+++T      +G   + +W  +    LH IGKD + F
Sbjct: 244 IPIPVEGADGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLLHFIGKDNIVF 303

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H + +PA L       LP  V ++ F+  +G K+S S    +   E +EE     D LRY
Sbjct: 304 HCLIFPAMLKGHGEYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEEFPDQQDVLRY 363

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N++L    GN ++R   +  K YDG IP PGAF   D
Sbjct: 364 VLTANAPESKDNDFTWKDFQTRNNSELVAIFGNFINRVTVLTHKYYDGAIPEPGAFNALD 423

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +L         I  +++      +  + ++L    ++Y   ++PW+  KT+ +R  TV
Sbjct: 424 TEVLDAIKAYPAVIGSSIEKYRFRESQTEFMNLARLGNKYLADEEPWKTIKTDVERTKTV 483

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADEN 483
           +YV +++   L++L +  +P  + K+ DIL V   ADEN
Sbjct: 484 MYVALQIAAALSVLSEPLLPHTSGKLKDILNVNSSADEN 522


>gi|311278894|ref|YP_003941125.1| methionyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748089|gb|ADO47841.1| methionyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 677

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIAEMSQEHQADFAGFDISYDNYHSTHSDENRELSELIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L ++ + L ++  S     L  +  N++  + + GL+   +SR    +G 
Sbjct: 185 MRESEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFEHGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDVTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +  +  D+LRY+  
Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHLDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 362 AKLSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFIAKRFDGVL----AAELADPA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYQTFTDAAGAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+LA +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPQLAER 502


>gi|238753408|ref|ZP_04614771.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708361|gb|EEQ00716.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 675

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGVEPEQMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ + L ++  S     L  +  N++  +  SGL+   +SR    +G 
Sbjct: 185 MRESEHFFFDLPAFSEMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           ++PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWREDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADKLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIAEAYNSRESGRAIREIMALADVANRYVDEQAPWVVAKQEGREADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPALTER 501


>gi|258654673|ref|YP_003203829.1| methionyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258557898|gb|ACV80840.1| methionyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 611

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 233/532 (43%), Gaps = 71/532 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + TA+A+P  N   HIGH     + ADV +R+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 5   VLTAVAWPYANGPRHIGHVSGFGVPADVFSRYQRMAGNDVLMVSGTDEHGTPILVQADQE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R   +    L +SYD F RT+ + H+   + L++ +   G        
Sbjct: 65  GVSARELADRYNRVIVEDLHGLGLSYDLFTRTSTRNHYAVVQELFRTVHRNGYFVAKTTM 124

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPVQ--------------WM 160
              S        D  +        Y GA G   +    Q +P+               + 
Sbjct: 125 SAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPIDLINPRSRINGETPVFT 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E +F  L A  D L  +  +  ++      R  V+ F  + L DL     T   DWGI
Sbjct: 185 ESEHFFLDLPALADALGGWLRTRTDW------RPNVLRFSLNLLDDLKPRAMTRDIDWGI 238

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT-------GYLDNPDGSKAKFW-------PAD 259
            +P     D P   +YVW DA+  YL+ +       G    PD    + W          
Sbjct: 239 PVPLDGWRDRPDKKLYVWFDAVIGYLSASIEWARRFGKNGEPDPDAWQRWWHGGDEQARA 298

Query: 260 LHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISK 305
            + +GKD + FH+  WPA LL+                L LP +V S  F+   G K S 
Sbjct: 299 YYFMGKDNITFHSQIWPAELLAYDGRGEHGGSAGSFGTLNLPTEVVSSEFLTMSGSKFST 358

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S   VI   + + E G D+LRYF+       +D  +  +   +R N +LAN  GNLV+RS
Sbjct: 359 SRRTVIYVGDFLREFGPDSLRYFIAAAGPENQDADFTWEEFVRRNNFELANEWGNLVNRS 418

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           VSM  K++ G IP   A T++D  +L         + + +       A A+ + +V   +
Sbjct: 419 VSMAHKNFGG-IPAGTARTDADVELLRASEAAFATVGDLLSRSRFKAASAEAMRVVGLAN 477

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y    +PW+LK  +P+R  TVL+  ++V+     LL  F+P  +  +F+ L
Sbjct: 478 KYISESEPWKLKD-DPERQGTVLHTALQVVDDAKTLLTPFLPHSSQAVFEAL 528


>gi|224583343|ref|YP_002637141.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254782871|sp|C0Q0Y1|SYM_SALPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|224467870|gb|ACN45700.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 677

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|159899304|ref|YP_001545551.1| methionyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892343|gb|ABX05423.1| methionyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 574

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 240/517 (46%), Gaps = 51/517 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + ++ A  Y +   H+GH     + +DV AR+ RL G +VL  +GTD+HG  I   A 
Sbjct: 3   KNILVAVAWPYASGARHLGHVAGFGVPSDVFARYQRLVGNNVLMVSGTDDHGTPITVRAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D  +   R+    L +SYD F RT+ + H+   +  + ++ +KG I+   
Sbjct: 63  REGKTPREVTDFYNAEIRNNLRDLGLSYDLFTRTSTENHYQITQAFFTRLQEKGYIFAQE 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEG-------- 164
             G YS  D+ +  D  V        Y  A G   +    Q +PV  +E           
Sbjct: 123 MIGTYSEADKRFLPDRYVEGTCPHCGYTKARGDQCDNCGKQLDPVDLIEPRSTLSGATPV 182

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216
                 +F  L A+ ++L  + ES   +      R  V  F    L D+     T D  W
Sbjct: 183 FKPTTHFFLNLPAFVERLREWIESQNHW------RPNVKRFSLGLLDDVPARAITRDLTW 236

Query: 217 GIKIPDDPQYI----MYVWIDALTNYLTT----TGYLDNPDGSKAKFWPADL---HVIGK 265
           G+ IP +        +YVW DA+  YL+     +  +  P+  +  +  +D    + +GK
Sbjct: 237 GVPIPVEGDEFDSKRIYVWFDAVIGYLSAAVEWSIKVGRPEAWRDWWLNSDARHYYFMGK 296

Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFI-LHKGEKISKSL--GNVIDPI-EVIEEV 320
           D + FH++ WPA L+    L LP +V S  F+ L  GEKIS S   GN I  + E + + 
Sbjct: 297 DNIVFHSVIWPAMLIGHGELELPYEVVSSEFLTLAGGEKISSSRAEGNSIPFVGEFLAQY 356

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRYFLV       D  +      +R N +L    GNLV+R +S+  K++ G +PTP
Sbjct: 357 DPDPLRYFLVIAGPETSDTEWSLGEFIRRNNEELVATWGNLVNRVLSITHKNF-GHVPTP 415

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A T  DE+ L+      + + + ++       L   ++    V+ Y  +Q+PW++ KT+
Sbjct: 416 QALTAEDEAALATVRAAFETVGKELEQAHFKAGLIATMAAARSVNEYLASQEPWKVLKTD 475

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+LYV ++ I  L  L   F+P  + K+ ++L
Sbjct: 476 RERGGTILYVALQAINNLRTLFTPFLPFTSQKLHELL 512


>gi|161502696|ref|YP_001569808.1| methionyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864043|gb|ABX20666.1| hypothetical protein SARI_00743 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 696

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 25  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 84

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +     +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 85  LGITPEQMIGEMRHEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 144

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 145 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 203

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 204 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 260

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 261 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 320

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 321 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 380

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 381 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 436

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 437 LYKTFTDAAAAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 496

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 497 CSMGINLFRVLMTYLKPVLPTLSERV 522


>gi|16761097|ref|NP_456714.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|213428244|ref|ZP_03360994.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586109|ref|ZP_03367935.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213650020|ref|ZP_03380073.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213864934|ref|ZP_03387053.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|25009376|sp|Q8Z5C3|SYM_SALTI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|25293137|pir||AH0776 methionine-tRNA ligase (EC 6.1.1.10) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503395|emb|CAD02534.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
          Length = 677

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|161613158|ref|YP_001587123.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161362522|gb|ABX66290.1| hypothetical protein SPAB_00866 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|320086592|emb|CBY96363.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 704

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 444

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 504

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530


>gi|162139570|ref|YP_217157.2| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|205353293|ref|YP_002227094.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857589|ref|YP_002244240.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|68565956|sp|Q57MI5|SYM_SALCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710917|sp|B5R0E7|SYM_SALEP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710918|sp|B5RBZ5|SYM_SALG2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|205273074|emb|CAR38026.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709392|emb|CAR33733.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 677

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|56412932|ref|YP_150007.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361863|ref|YP_002141499.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|68565964|sp|Q5PJ43|SYM_SALPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710921|sp|B5BE81|SYM_SALPK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56127189|gb|AAV76695.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093339|emb|CAR58787.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 677

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|29141207|ref|NP_804549.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|29136833|gb|AAO68398.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 677

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|204929214|ref|ZP_03220357.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204321758|gb|EDZ06957.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 677

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|71281104|ref|YP_269544.1| methionyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123733733|sp|Q480H5|SYM_COLP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71146844|gb|AAZ27317.1| methionyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 713

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 234/518 (45%), Gaps = 46/518 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E+ K+ ++ A+ Y N   H+GH  E I  D+  RF R+ G +  F    D HG  I  
Sbjct: 18  LAEKRKILVTCALPYANGSIHLGHMLEHIQTDIWVRFQRMRGHETYFVCADDAHGTPIML 77

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ  G+T +  ++       ++ +D   IS+D++  T    + +    ++  +  KG I
Sbjct: 78  KAQELGITPEEMINGVREERIKEFSD-FHISFDNYHTTHSDENKEYSEKIYNALHAKGHI 136

Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160
                S  Y      +  D            E   G       A ++P + +        
Sbjct: 137 KTRIISQLYDPEKGMFLADRFVKGTCPKCKSEDENGDSCDNCGATYSPTEVLNPRSAISG 196

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E YFF L A++  L  +  S     L  E  N++  + + GLK   +SR   
Sbjct: 197 ATPILKDSEHYFFDLPAFETMLSDWIRSGA---LQEEVANKLTEWFEQGLKQWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDI 267
            +G +IP+ P    YVW+DA   Y+ +   L + D +     FW     A+L H IGKDI
Sbjct: 254 YFGFEIPNAPGKFFYVWLDAPIGYMGSFKNLCDKDSTIDFDSFWNKNSDAELYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A+   P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY
Sbjct: 314 INFHSLFWPAMLEGADFRKPTAVFAHGFVTVNGEKMSKSKGTFIKGRTYLDHLNPEYLRY 373

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++    D    + +   +RVN+DL   + N+ SR  S I K +DGM+ T       
Sbjct: 374 YYATKLTHKIDDLDLNLEDFVQRVNSDLVGKVVNIASRCASFITKRFDGMLST----NID 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
           D+++          I  + +++   R + ++++L  +V+ Y   ++PW+L K  T     
Sbjct: 430 DQALADEVMAAGDSIAAHYESRDFGRGMREIMALADKVNEYIAIKEPWQLVKDETKQQEV 489

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +  + + + R L I L+  +P LA+      F+ DE
Sbjct: 490 QDICSLGINMFRTLMIYLKPVLPVLADST--AAFLNDE 525


>gi|117925153|ref|YP_865770.1| methionyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|187647733|sp|A0L8S1|SYM_MAGSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117608909|gb|ABK44364.1| methionyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 686

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 225/502 (44%), Gaps = 40/502 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RFH+L G + ++    D HG  I   AQ  
Sbjct: 3   RILVTSALPYANGHIHLGHLVEYIQTDIWVRFHKLRGEECIYMCADDTHGTPIMLRAQKE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  V+Q  +          + +D++  T  + +      ++ K  D G I      
Sbjct: 63  GITPEQLVNQMHKEHAQDFAAFFVQFDEYYTTNSEENRLLSEEIYLKNRDGGHIEVDTIQ 122

Query: 126 GWYSLRDEAYYNDDEV-----YKGADGQY------YNAQHNPVQWME------------- 161
             Y   D  +  D  +     + GA  QY       +A + P +  E             
Sbjct: 123 QAYCEHDAMFLPDRFIRGTCPHCGAVDQYGDSCEVCSATYRPTELKEAKCAVCGSQPVEK 182

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E YFF+L  + D L  + +S     L  E   ++  + + GLK   +SR    +G +I
Sbjct: 183 SSEHYFFKLQDFSDYLKEWIQSG---TLQPEMAAKLNEWFEQGLKHWDISRDGPYFGFEI 239

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD P    YVW+DA T Y+ TT +     G     +W  D      H IGKDIL FH ++
Sbjct: 240 PDAPGKYFYVWLDAPTGYMATTWHHCKKQGINFDDYWRRDDKAEVYHFIGKDILYFHTLF 299

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  +    P  VF+HGF+   G+K+SKS G  I+  +    +  + LRY+   ++ 
Sbjct: 300 WPAMLHGSGFRTPTAVFAHGFLTVNGQKMSKSRGTFINARQYSAFLNPEYLRYYYAAKLT 359

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D   + D   +RVN+DL   + NL SR+   I+K ++G +    A    D+ +   
Sbjct: 360 SRVDDLDLNLDDFVQRVNSDLVGKVVNLASRTAGFIVKRFEGQL---CADYPEDDGLFQQ 416

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVT 451
             +  +EI    + +   +A+  ++ L    ++Y +   PW L K      R   V  VT
Sbjct: 417 FHQAGEEIAALYEKREFAKAMQAIMRLADSANQYVENHAPWVLAKDPLQSQRLQQVCSVT 476

Query: 452 VEVIRQLAILLQAFVPKLANKI 473
           + + R L I L+  +P ++N++
Sbjct: 477 LNLFRTLMIFLKPVLPYMSNQV 498


>gi|119469304|ref|ZP_01612243.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119447168|gb|EAW28437.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 673

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 229/505 (45%), Gaps = 43/505 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHETYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  V   S    RD AD  +I +D++  T  + + +   +++ +++D G I K 
Sbjct: 63  KQGITPEEMVKNVSIERQRDFAD-FNIKFDNYHSTHSQENKEFSELIYNRLNDAGHIKKH 121

Query: 123 CYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G       A ++P + +           
Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSEDQNGDSCDSCGATYSPTELINPRSVMSGAEP 181

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E YFF L A++  L  +  S     +  E  N++  +   GL+   +SR    +G
Sbjct: 182 ILKDSEHYFFDLPAFEGMLKEWLHSG---TIQQEMANKLDEWFTDGLQQWDISRDAPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFH 271
            +IP+ P    YVW+DA   Y+ +   L +  G     FW     A+L H IGKDI+ FH
Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKKGIDFDAFWAEGSEAELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+   
Sbjct: 299 SLFWPAMLEGAKFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++  G  D   + +   +RVN+DL   + N+ SR    I K +DG +    + T     +
Sbjct: 359 KLNSGIIDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKL----SATIMQPEL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448
           L         I  + +N+   RA+ ++++L  + +++ D   PW L K  T    A  V 
Sbjct: 415 LEDFQAAAPSITTHFENREYSRAIREIMALADKANQFIDGAAPWVLIKDETKQQEAHDVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKLANKI 473
            + + + R L   L+  +P +A  +
Sbjct: 475 SLGLNLFRVLITYLKPVLPAMAQNV 499


>gi|322615182|gb|EFY12104.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617773|gb|EFY14669.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624633|gb|EFY21464.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626916|gb|EFY23712.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634102|gb|EFY30838.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635707|gb|EFY32417.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640158|gb|EFY36822.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646419|gb|EFY42931.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649387|gb|EFY45823.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322656507|gb|EFY52796.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661483|gb|EFY57707.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665629|gb|EFY61813.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667153|gb|EFY63320.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671159|gb|EFY67287.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675200|gb|EFY71277.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680809|gb|EFY76844.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686984|gb|EFY82961.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192748|gb|EFZ77975.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198820|gb|EFZ83919.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323205170|gb|EFZ90148.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208213|gb|EFZ93157.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210977|gb|EFZ95838.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215762|gb|EGA00505.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220692|gb|EGA05138.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224686|gb|EGA08958.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231207|gb|EGA15322.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233642|gb|EGA17734.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237712|gb|EGA21772.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245695|gb|EGA29689.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248941|gb|EGA32865.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252988|gb|EGA36821.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258664|gb|EGA42326.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259496|gb|EGA43131.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268279|gb|EGA51754.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271931|gb|EGA55347.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 677

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|168818140|ref|ZP_02830140.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|200387153|ref|ZP_03213765.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|187649781|sp|A9N7I2|SYM_SALPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|199604251|gb|EDZ02796.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205345163|gb|EDZ31927.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
          Length = 677

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|85058948|ref|YP_454650.1| methionyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123725420|sp|Q2NUD0|SYM_SODGM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|84779468|dbj|BAE74245.1| methionyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 679

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 48/506 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  + F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQIYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  +  +  N  N     D     ISYD++  T  + +     ++++++ + G I   
Sbjct: 66  LGIAPEEMI--NEMNLEHQTDFAGFGISYDNYHSTHSEENQQLSTLIYQRLKENGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM---------- 160
             S  +   ++  +  D   KG+            + +   A +NP   +          
Sbjct: 124 TISQLFD-PEKVMFLPDRFVKGSCPKCHSPDQYGDNCEVCGATYNPTDLINPKSAVSGTT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L A+ + + ++  S     L  +  N++  + +SGL++  +SR    +
Sbjct: 183 PVMRESEHFFFDLPAFSEMMRAWTRSG---ALQEQVANKMQEWFESGLQEWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G ++PD P    YVW+DA   Y++    L     D    +FW  D      H IGKDI+ 
Sbjct: 240 GFEVPDAPGKYFYVWLDAPIGYMSAFQNLCQKRSDLRFDEFWDVDSKADLYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  ++   P  +F HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLAHLDAECLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A T +D 
Sbjct: 360 AAKLSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFINKRFDGQL----AATVADP 415

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446
           ++ +        I +   ++   RA+ ++++L    +RY D Q PW + K     A    
Sbjct: 416 ALYATFVNAATSIGDAFSSRETSRAIREIMALADLANRYVDEQAPWVVAKQEGREADLQA 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  + +++ R L   L+  +P LA +
Sbjct: 476 ICSMGIQLFRVLMTYLKPVLPSLAER 501


>gi|254168412|ref|ZP_04875257.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289595772|ref|YP_003482468.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622693|gb|EDY35263.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533559|gb|ADD07906.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 734

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 256/524 (48%), Gaps = 56/524 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++I  A  Y N   H+GH   AY  + AD+ AR+ R+ G +VL  +G+DEHG  I   A
Sbjct: 2   RIFIGVAWPYANGPIHLGHIVGAY--LPADIFARYQRMQGNEVLMVSGSDEHGTPITITA 59

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G + +   D+  +   ++ + L IS+D + RT+   H    +  + ++ + G +YK 
Sbjct: 60  EKEGKSPQEIADRYHKINSEVMEKLGISFDLYFRTSHPNHEKIVKDFFLRLWENGYLYKK 119

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH----------------NPV 157
                Y  + + +  D  V        Y+ A G Q  N                    P 
Sbjct: 120 KMLLPYCPQCKRFLPDRYVVGTCPYCGYENAHGDQCDNCGRMLDPKDLINPRCVICGTPT 179

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSRKT 213
           ++ E E  FF LS  +  +L + E    +      R+ VI    +FVK GLKD +++R  
Sbjct: 180 EFRETEHIFFALSKLEGTILKWLEDKTYW------RDNVIKFTRNFVKGGLKDRAITR-D 232

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD----LHVIG 264
            +WG+++P +      +YVW DA+  YL+ +      +N D     FW  +     + +G
Sbjct: 233 LEWGVEVPLEGFENKKIYVWFDAVIGYLSASIEWARRNNKDWEA--FWKDENTRHYYFLG 290

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           KD + FH I WPA L++   L LP  V ++ ++   GEK SKS G  +   E++E    D
Sbjct: 291 KDNIPFHTIIWPAMLMAHKGLNLPYNVVANEYLRFSGEKFSKSRGIGVWMPELLENFHPD 350

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            +R++    +   +D  +  D   ++VN +L +   N V R++    +++ G +P  G  
Sbjct: 351 IIRFYGTVNMPESRDSDFTWDDFVQKVNEELIDKFANFVHRALIFAYRNF-GEVPPRGEV 409

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D   + +  + ++++ + M++  + +A  + ++L    + YFD + PW L K + ++
Sbjct: 410 DEVDREAIKLIMQTIKKMNKYMESVELKKAFKEWLNLARYGNVYFDRKAPWALCKEDREK 469

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +T + +++++++ LAIL   F+P  + +I+   F+ +E+  FQ
Sbjct: 470 CATAINISLQIVQALAILGAPFLPFTSERIWK--FLGNEDSIFQ 511


>gi|168242236|ref|ZP_02667168.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168466170|ref|ZP_02700040.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194442893|ref|YP_002041426.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448741|ref|YP_002046208.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197248289|ref|YP_002147126.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|226710915|sp|B5EXZ5|SYM_SALA4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710919|sp|B4T9X0|SYM_SALHS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710920|sp|B4SXY7|SYM_SALNS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194401556|gb|ACF61778.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194407045|gb|ACF67264.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195631196|gb|EDX49756.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197211992|gb|ACH49389.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205338339|gb|EDZ25103.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 677

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|292492766|ref|YP_003528205.1| methionyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581361|gb|ADE15818.1| methionyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 674

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 229/508 (45%), Gaps = 45/508 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF R+   +  +    D HG  I   AQ  
Sbjct: 4   RILVTSALPYANGPLHLGHLVEYIQTDIWVRFQRIRSHECYYVCADDAHGTPIMLRAQQE 63

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++Q  R  R D AD   +S+D++  T    +      ++ +  DKG I     
Sbjct: 64  GITPEALIEQCGREHRADFAD-FAVSFDNYYSTHSPENRALSETIYLRNRDKGHITTRTV 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------- 159
              Y      +  D  +       GA  QY        A + P +               
Sbjct: 123 RQAYDPIKGMFLPDRFIRGTCPRCGAPDQYGDSCEACGATYTPTELKDAISVLSGTPPVE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L  ++  L ++ +      L  E  N++  + ++GL+D  +SR    +G  
Sbjct: 183 RESEHYFFKLKDFEPLLKAWTQGGH---LQHEMANKLNEWFEAGLQDWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IPD      YVW+DA   YL +  YL + +G     + A        H IGKDIL FHA+
Sbjct: 240 IPDATDKYFYVWLDAPIGYLASFKYLCDRNGLDFDAFMAPDSTTELYHFIGKDILYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A+  LP  +F+HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 300 FWPAMLHGADFRLPTAIFAHGFLTVNGQKMSKSRGTFIKAHTYLNHLNPEYLRYYFAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             G +D   + +    RVNADL   + N+ SR    I K +   +    A   + E++  
Sbjct: 360 GSGIEDLDLNFEDFTARVNADLVGKVVNIASRCAGFINKHFHSRL----ANHLTKEALFQ 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451
             +     + +  +N+    A+ ++++L  + +RY D ++PW   K  P R   V  V  
Sbjct: 416 EFAAAADRLAQYYENREFGHAMREIMALADQANRYIDDRQPWVAIK-EPGREQEVQEVCT 474

Query: 452 --VEVIRQLAILLQAFVPKLANKIFDIL 477
             + + RQL + L+  +P +A K  + L
Sbjct: 475 LGLNLFRQLMVYLKPVLPMMAEKAEEFL 502


>gi|16765484|ref|NP_461099.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167991077|ref|ZP_02572176.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|198241850|ref|YP_002216239.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|25009378|sp|Q8ZNN4|SYM_SALTY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710916|sp|B5FMX1|SYM_SALDC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16420690|gb|AAL21058.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197936366|gb|ACH73699.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205330481|gb|EDZ17245.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247369|emb|CBG25194.1| MetRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994216|gb|ACY89101.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158716|emb|CBW18228.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913145|dbj|BAJ37119.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321224806|gb|EFX49869.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|326623989|gb|EGE30334.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 677

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|323130480|gb|ADX17910.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 704

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 153 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 211

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 212 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 268

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 269 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 328

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 329 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 388

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 389 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 444

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 445 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 504

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 505 CSMGINLFRVLMTYLKPVLPTLSERV 530


>gi|168259509|ref|ZP_02681482.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205351288|gb|EDZ37919.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 677

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|288549857|ref|ZP_05968413.2| methionine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317653|gb|EFC56591.1| methionine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 680

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGISPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A    D  
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELA----DPE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I +  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAAAAIGDAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+L+ +
Sbjct: 481 CTMGLNMFRVLMTWLKPVLPQLSAR 505


>gi|239817050|ref|YP_002945960.1| methionyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239803627|gb|ACS20694.1| methionyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 704

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 239/529 (45%), Gaps = 68/529 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N + HIGH  E I AD+  R  R++G +V F    D HG  I  
Sbjct: 1   MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGVT + FV + +   +   D   IS+D++  T    +H   + +++ +   G I 
Sbjct: 61  AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160
                 +Y   ++  +  D   KG      A  QY        A + P + +        
Sbjct: 121 TKSVEQFYD-PEKGMFLADRFIKGECPNCHAKDQYGDNCEVCGAVYAPTELINPYSALSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLS 208
                   + +FF+LS  + +      +     +  E +N++  ++      K GL D  
Sbjct: 180 AKPELRSSDHFFFKLSDPRCEAYLKEWTAAAGHVQSEVQNKIREWLYKDDEGKGGLGDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-------------------TGYLDNPD 249
           +SR    +GI+IPD P    YVW+DA   YL +                   T Y+ +PD
Sbjct: 240 ISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPD 299

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
             +       +H IGKDI+ FH ++WPA L  +    P  V+ HG +   GEK+SKS G 
Sbjct: 300 LEQ-------VHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGT 352

Query: 310 VIDPIEVIEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            IDP+  +  +G+D   LRY++  ++    +D  ++ +    RVN+DL     N+ SR+ 
Sbjct: 353 GIDPLRYL-SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAA 411

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +   G  +   +++L        ++      +   RAL +V++L  +V+ 
Sbjct: 412 GFIGKRFGGKL---GEVSADGDALLFALRDAAPQLHSLYDGRDYARALREVMALADKVNE 468

Query: 427 YFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y D  KPWEL  K+    R   V  V +E  R L + L+  +P LA  +
Sbjct: 469 YVDQNKPWELAKKEGQEARLHDVCTVCIEAFRLLTLYLKPVLPALAANV 517


>gi|150400079|ref|YP_001323846.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|187647751|sp|A6URW2|SYM_METVS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150012782|gb|ABR55234.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 663

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 237/508 (46%), Gaps = 48/508 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL   +V    GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIFTRYLRLKRENVFHVGGTDNHGVPITLKAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG-- 122
            GVT    VD+     ++  D L++S+D F RT    H +T +  +K + + G IY+   
Sbjct: 62  EGVTPLDIVDRYHNAIKEDLDSLNVSFDSFGRTHSDIHIETAQEFYKTLKENGYIYEKEI 121

Query: 123 ----CYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--------- 164
               C     SL D     +  + + E  +G   +       P + +E            
Sbjct: 122 EQFYCEKCSMSLADRYVEGKCPFCEGEA-RGDHCEVCGRHLEPTELLEPYCIHCNSKPEI 180

Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+LSA +++L  Y  +  E  +P   +N  + +++  L D  +SR    WG+ 
Sbjct: 181 KKSIHYFFKLSAMKEELTEYITNAKE--MPEHVKNMALRWIEE-LHDWDVSR-NLTWGVP 236

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD------LHVIGKDILRFHA 272
           IP     +MYVWI+A   Y++ T  L    G   K +W +        H IGKDI   HA
Sbjct: 237 IPKSNGQVMYVWIEAPIGYVSFTKEL----GEIWKDYWISKDVQSKITHFIGKDITVHHA 292

Query: 273 IYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++WP  L    N  +P  V S G++  + +K+S S   V+   + +E+   D LRYFL+ 
Sbjct: 293 VFWPGILKGVKNYKMPDSVVSGGYLTLENKKMSTSKNWVVWVKDFVEKFSPDYLRYFLMV 352

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +  D  +KR+N +L + IGN   R++    + + G IP     T  +E +L
Sbjct: 353 NAPLNRDTDFSWDDFQKRINTELIDIIGNFSHRTLVFTERKF-GKIPNVQKDTLKEEDLL 411

Query: 392 SV--CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            +  C +  +   + ++      A+ ++I L  E + YF A +PW +  T+ +R   V+Y
Sbjct: 412 LIRKCEKTTETFDKLIREYNFKDAIMEIILLSKEGNAYFQAMQPWAI--TDEERLKEVMY 469

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                ++ +  LL  F+P    ++ D++
Sbjct: 470 TCCTTLKYIVYLLSPFMPVKTGELLDLM 497


>gi|221065401|ref|ZP_03541506.1| methionyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220710424|gb|EED65792.1| methionyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 719

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 238/523 (45%), Gaps = 50/523 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 5   KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKAAGFIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
            ++   ++  +  D   KG      A  QY +               NP   +       
Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183

Query: 162 --EEGYFFRLSAYQ--DKLLSYYES----HPEFILPIER----RNEVISFVKSGLKDLSL 209
              E +FF+LS  +  + L  + +S     PE    I+     R         GL D  +
Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQSGQHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPALEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P ++  HGF+ ++ GEK+SKS G  +DP++ +  ++  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363

Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   I K +DG +   G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDGRL---G 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTN 440
             +E  +++L+        I    + +   RA  +++ L  +V+ Y DA KPWEL KK  
Sbjct: 421 VVSEDGQTLLAALREQQAAIVAAYEGRDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            D R   V    +E  R L I L   +P +A ++ + L V  E
Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVANFLIVPPE 523


>gi|82777409|ref|YP_403758.1| methionyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123769585|sp|Q32EI8|SYM_SHIDS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81241557|gb|ABB62267.1| methionine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 677

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 232/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KQILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++     K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSNFRKPTNLFVHGYVTVNSAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPE 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPKLTER 502


>gi|68536602|ref|YP_251307.1| methionyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123775680|sp|Q4JU18|SYM_CORJK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68264201|emb|CAI37689.1| metS [Corynebacterium jeikeium K411]
          Length = 612

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 250/533 (46%), Gaps = 69/533 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  S A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A+
Sbjct: 3   KRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGNEVLMVSGTDEHGTPLLVQAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D+ +R   +    L +SYD F RTT + H+   + L+  + + G +    
Sbjct: 63  KEGTTVQELADRYNRIIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFTGLYNNGYMVTQT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------Q 158
             G  S        D  +         K A G   +   N +                 +
Sbjct: 123 TRGAISPSTGRTLPDRYIEGTCPICGAKDARGDQCDNCGNQLDPEDLIDPRSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           +++ E +   L A  + L ++ +   ++      R  V+ F  + L+D+   ++SR   D
Sbjct: 183 FIDTEHFMLDLPALAEALTTWLKGRTDW------RPNVLKFSLNLLEDIRPRAMSRD-ID 235

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HV 262
           WG+ IP     D+    +YVW DA+  YL+ +      + +PD  + K+W  P  L  + 
Sbjct: 236 WGVPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRIGDPDAWR-KWWNDPEALSYYF 294

Query: 263 IGKDILRFHAIYWPAFLLSAN----------------LPLPKKVFSHGFILHKGEKISKS 306
           +GKD + FH+  WPA LL                   L LP +V S  F+   G K S S
Sbjct: 295 MGKDNITFHSQIWPAELLGYGGQGSKGGEAGDLADPALNLPTEVVSSEFLTMSGSKFSSS 354

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            G VI   + ++E G DALRYF+        D  +  D   +R+N++LAN  GNLV+R+V
Sbjct: 355 KGVVIYVRDFLKEFGPDALRYFIATAGPETTDTDFTWDEFVRRINSELANEWGNLVNRTV 414

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM  K++ G +PTPG  T  DE++L+  ++    + +N+        + + + +    ++
Sbjct: 415 SMAYKNF-GEVPTPGPLTAEDEALLAESAKAFDVVGDNINLSRFKAGITEAMRIAGRANQ 473

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y  A +PW+L K     +R +TVLY  ++V+  +  LL  ++P  A KIF+ L
Sbjct: 474 YIAAMEPWKLAKDENQRERLATVLYTALQVVSDVNTLLTPYLPFSAQKIFETL 526


>gi|303244973|ref|ZP_07331297.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484684|gb|EFL47624.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 691

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 238/515 (46%), Gaps = 53/515 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EK  I+TA+AY N   H+GHA    I AD++ R+ +L+  DV+   GTD HG  I   A+
Sbjct: 3   EKYLITTALAYTNGPLHLGHARSTYIPADIMRRYLKLNKKDVIHVGGTDNHGVPITITAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV  +  V++     +   D L+I +D + +T    H  T +  + K+ + G IY+  
Sbjct: 63  KEGVKPEDIVNKYHNEIKRDLDNLNIEFDSYGKTHSDIHIKTAQEFYLKLKENGYIYEKE 122

Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQY------------------YNAQHNPVQWM 160
              +Y  +   +  D  V     + G + +                   Y    N    +
Sbjct: 123 IEQFYCPKCNRFLADRYVEGICPFCGGEARGDHCEVCGRHLEPTELINPYCVNCNTTPEL 182

Query: 161 EEEGY-FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +  + FF+LSA  D L  Y ES     +P   +N   S++K  L D  +SR   DWG+ 
Sbjct: 183 RKTIHRFFKLSALSDDLRRYVESSD---MPEHVKNMAYSWIKE-LHDWDISR-DIDWGVP 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-------------DNPDG--SKAKFWPADLHVIG 264
           IPD    +MYVW++A   Y++ T  L             +N +G  +  K W    H IG
Sbjct: 238 IPDSENQVMYVWLEAPIGYISFTKQLGEVWKDYWLKKDKENSNGKNNNVKIW----HFIG 293

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           KDI   H+++WP  L++     LP  V S G++  +G K+S S   V+   + ++    D
Sbjct: 294 KDITVHHSVFWPGMLIANGEYNLPSSVISGGYLTLEGRKMSTSKKWVVWVDDFVKYFDSD 353

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGA 382
            LRYFL+      +D  +  D  +KR+N +L   IGN   R++    + +  + I     
Sbjct: 354 YLRYFLMVNAPLNRDCDFSFDEFQKRINTELIAIIGNFTHRALVFSHRKFKEIPIVDEEN 413

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             + D+ ++S C   ++++  ++       AL  V+ L  + + YF   +PW ++  N +
Sbjct: 414 LKDEDKELISRCKETVKKVDNHIMEFNFKDALMGVVHLAKDGNNYFQKMEPWTVE--NEN 471

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R   +LY    V++ +  LL  F+P  + K+ D++
Sbjct: 472 RLREILYTCAVVVKHILYLLYPFMPNKSMKLLDLM 506


>gi|330433077|gb|AEC18136.1| methionyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 680

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 240/519 (46%), Gaps = 45/519 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I  
Sbjct: 1   MSSRRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++ +  +    +         +ISYD++  T    + +    ++ K+   G I 
Sbjct: 61  KADQMGISPEQLIADVQQQHISSFSGFNISYDNYYSTHSPENQELSCAIYTKLKQNGFIK 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160
               S  Y   ++  +  D   KG      A+ QY       +A ++P + +        
Sbjct: 121 SKTISQLYD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L +++  L  + +S     L  E  N+++ + +SGL+   +SR   
Sbjct: 180 ATPVLKESEHFFFDLPSFESMLKDWIKSGS---LQAEVSNKMMEWFESGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP+ P    YVW+DA   Y+ +   L    +     FW  +      H IGKDI+
Sbjct: 237 YFGFEIPNQPGKYFYVWLDAPIGYMASFKNLCSRKNIDFDHFWQQNSNTELYHFIGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A    P  +F HG++   GEK+SKS G  I     +E +  + LRY+
Sbjct: 297 YFHSLFWPAMLEGAGYRKPNNIFVHGYVTVNGEKMSKSRGTFIQAKTYLEHLDPECLRYY 356

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVN+D+ N + NL SR+   I K + G +    A    D
Sbjct: 357 YAAKLSGRIDDLDLNLEDFVQRVNSDIVNKLVNLASRNAGFIQKRFGGKL----ADRLHD 412

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
           +++    S+  ++I ++ +N+  ++A+ ++++L  + ++Y D   PW + K         
Sbjct: 413 QALWQEFSQQAEQIAQHYENREYNKAIREIMNLCDKANKYVDETAPWVIAKDENRQQELH 472

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            V  + +++ R L   L+  +P LA +     F+ DE R
Sbjct: 473 EVCSMGIQMFRMLMGYLKPVLPTLAERA--EAFLHDELR 509


>gi|168236320|ref|ZP_02661378.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194737671|ref|YP_002115244.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|226710922|sp|B4TNL2|SYM_SALSV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194713173|gb|ACF92394.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197290599|gb|EDY29954.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 677

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 45/506 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+  
Sbjct: 302 HSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAAVVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
             + + + R L   L+  +P L+ ++
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSERV 503


>gi|227356723|ref|ZP_03841109.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227163231|gb|EEI48162.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 675

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 229/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++ S+  +      +ISYD++  T  + +      ++  +   G I     S
Sbjct: 67  GITPEAMIEEMSKEHQQDFAGFNISYDNYHSTHSEENRQLSTKIYLALKKNGHIKSKTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             Y   ++  +  D   KG      A  QY        + ++P + +             
Sbjct: 127 QLYD-EEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGSTYSPTELINPRSVVSGSTPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF L A+ + L  +  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RETEHYFFDLPAFSNMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW----PADL-HVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L    G  S  +FW      DL H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFLNLCEKRGDLSFDEFWNKESKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++    D LRY+   +
Sbjct: 303 LFWPAVLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K +DG +    A +  D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----AASLDDAKLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                + + I +  +N+   +A+ ++++L  E +RY D + PW + K     A    +  
Sbjct: 419 QHFVDMQESIAQCFENREFGKAIREIMALADEANRYIDEKAPWVVAKQEGKEAELQAICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L  +
Sbjct: 479 MGINLFRVLMTYLKPILPSLTER 501


>gi|227871837|ref|ZP_03990239.1| methionine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842338|gb|EEJ52566.1| methionine--tRNA ligase [Oribacterium sinus F0268]
          Length = 468

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/279 (38%), Positives = 160/279 (57%), Gaps = 16/279 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAF 278
           D + ++YVW+DAL+NY+T  GY  + DG       K+WPADLH+IGKDI+RFH IYWP F
Sbjct: 4   DEKNVVYVWLDALSNYITGIGY--DVDGEHQERFKKYWPADLHLIGKDIVRFHTIYWPIF 61

Query: 279 LLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           L+S N+PLPK+VF H ++L       +G K+SKS GNVI   +++   GVDA+R+F++ E
Sbjct: 62  LMSLNVPLPKQVFGHPWLLTATAKSDEGTKMSKSRGNVIYADDLVRLFGVDAVRFFVMHE 121

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    DG    + + +R N+ LAN +GNLV R++SM  K +DG++   G     D+ + +
Sbjct: 122 MPFENDGVISWELMVERFNSQLANILGNLVKRTISMSNKYFDGIVEDKGVTEPVDQDLKN 181

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYV 450
                 +     M    +  AL  +  +    ++Y D  +PW L K  +  DR  TVLY 
Sbjct: 182 TVLEQAKLAASKMDELKVADALTAIFEIFRRSNKYIDETEPWVLAKEESKADRLRTVLYN 241

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             E I   A LL++F+P    +I + L   +  R F SL
Sbjct: 242 LTESIVIGASLLKSFMPSTGAEILEQLSTTE--RDFASL 278


>gi|270013433|gb|EFA09881.1| hypothetical protein TcasGA2_TC012029 [Tribolium castaneum]
          Length = 287

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 154/277 (55%), Gaps = 13/277 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +   K +++T I Y NA PHIGH Y  +IAD L R+ ++ G     F+TGTDEHG KI +
Sbjct: 15  QSNSKFFVTTPIYYVNASPHIGHLYSSVIADALYRWQQVLGAGKFKFSTGTDEHGSKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA         +  + S +++ +++V  ISY DF+RT+++ H       W  + +KG I+
Sbjct: 75  AAHKNNTNPSDYCTRVSSDYKRLSEVFSISYTDFVRTSDEEHKKCVHKFWNVLKNKGKIF 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK--GADGQ---YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
              Y+GWY + DE++  + ++ +  G DG+         +PV+W+EE  Y F L + QD 
Sbjct: 135 SSKYAGWYCISDESFLTESQLKEKVGPDGRKTIISGESGHPVEWIEEVNYMFPLGSLQDD 194

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
            + Y+      + P + +  ++  V  G L D+S+SR      WGI++PDD    +YVW+
Sbjct: 195 -VKYWLRSENAVRPAKFQKILLDMVSKGPLPDISISRPASRVHWGIQVPDDETQTVYVWL 253

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           DAL NYLT  GY      S  + WP  + VIGKDIL+
Sbjct: 254 DALVNYLTAAGY---SHASLHQIWPPSVQVIGKDILK 287


>gi|269928562|ref|YP_003320883.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787919|gb|ACZ40061.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 593

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 234/517 (45%), Gaps = 46/517 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E++ +  A  Y N   H+GH   + + AD+ AR+HRL G  VL  +G+D HG  I  +A+
Sbjct: 3   ERIGVFVAWPYANGDLHLGHVAGVYLPADIFARYHRLRGNRVLMVSGSDAHGTPITVSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV+ + F ++  R F +    L IS+D F  T  + H    + +++ + ++G I+   
Sbjct: 63  RAGVSPREFFERYHRRFLESFIGLGISFDLFTHTDTENHAAVSQDIFRVLYERGYIHTEA 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPV 157
            +  Y   D+ +  D  V        Y  A G   +                      PV
Sbjct: 123 MAQLYCETDQRFLPDRYVEGTCPHCGYPNARGDQCDNCGRTLDATELIDPRCKLCGSQPV 182

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L A++  LL Y      +   ++R  E  ++++ GLK   ++R   +WG
Sbjct: 183 V-RETEHFFFDLPAFEGPLLEYIGRQEHWRPNVQRFVE--NYLRGGLKPRPVTRD-IEWG 238

Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--------DLHVIGKD 266
           I +P  P Y   +MYVW +A+  YL+ +       G + K W A          + IGKD
Sbjct: 239 IPVPI-PGYEHKVMYVWFEAVIGYLSASIEAAKNRGEE-KAWEAWWTDPAARGYYFIGKD 296

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            + FHAI WPA L+  +  L LP  + +  F+  +G++ S S    +   + +E    D 
Sbjct: 297 NIPFHAIIWPAELMGYDERLNLPFDIPASEFLNLEGQQFSTSRNWAVWLPDYLERYAPDP 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY+L        D  +   G  +R N +L    GNLV+R +S  ++ +DG +P PG   
Sbjct: 357 LRYYLTAIAPETGDSEFTWRGYVERNNNELVAAWGNLVNRVISFAVRHWDGRVPEPGPQD 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D  +L   S     +  +        AL + +SL  EV+RY D + PW   K +   A
Sbjct: 417 ARDTELLDQISAGFGTVGAHYARAEFRAALRETMSLAREVNRYLDDKAPWFQIKEDRAAA 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            T +YV +  I  LA L    +P  + ++   L   D
Sbjct: 477 GTTIYVALRAIDSLATLFAPVLPFTSAEVKRFLGYED 513


>gi|227497764|ref|ZP_03927950.1| methionine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832819|gb|EEH65202.1| methionine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 613

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 242/531 (45%), Gaps = 61/531 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+N+R   +    L +SYD F RTT   H+   + +++ + D G + +   
Sbjct: 63  EGISARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQEMFRTVRDNGYMVEQVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +          GA G   +A  N +                 ++
Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGTPGARGDQCDACGNQLDPTDLIDPHSRINGEVPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E   +F  L A  + L ++ +   E       R  VI F K+ L+++     T   DWG
Sbjct: 183 VESNHWFLDLPALAEALGAWLD---EREASGTWRPNVIRFSKNILEEIRPRAMTRDIDWG 239

Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266
           I +P   D P   +YVW DA+  YL+ +        +P+  + ++W  P  L  + +GKD
Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWR-QWWNDPQALSYYFMGKD 298

Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA LL  N              L LP +V S  F+  +G K S S G VI 
Sbjct: 299 NIVFHSQIWPAELLGYNGQGDKGGHSGELGVLNLPTEVVSSEFLTMEGRKFSSSHGIVIY 358

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +     DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K 
Sbjct: 359 VRDFLARYQADALRYFISAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G IP PG   E D  +L         + E +++     ALA+ + LV E ++Y    +
Sbjct: 419 F-GEIPEPGELEEIDRVLLDSIETGFTTVGELIRHHRQKAALAEAMRLVGEANKYVADTE 477

Query: 433 PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           P++LK      R +T+L+   + +  L ++L  F+P  AN +  IL  A E
Sbjct: 478 PFKLKSEEQLPRLATILHTLAQAVADLNLMLSPFLPHAANDVDRILGGAGE 528


>gi|300770034|ref|ZP_07079913.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762510|gb|EFK59327.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 689

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 259/540 (47%), Gaps = 42/540 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++++  I++A+ Y N   HIGH A   I  D+  R+ RL+  DV++  G+DEHG  I 
Sbjct: 3   ITDKKRYTITSALPYANGPLHIGHLAGAYIPGDIFVRYLRLNQKDVVYVCGSDEHGAAIT 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+ ++  ++  +   IS+D + RT+E  HH   +  +  + +KG+ 
Sbjct: 63  IKAKKEGITPREIIDKYNQQIKESFEEFGISFDIYHRTSEPVHHQLSQEFFLNLYNKGEF 122

Query: 120 YKGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM-- 160
            +     +Y      +  D                 D+  K           NP+  +  
Sbjct: 123 IERFSEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKCGTSLSPTDLINPISTLSG 182

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  YQ  L  +     +  L      + +S++KSGL+  S++R   
Sbjct: 183 KTPVLKETKHWYLPLDKYQPWLEKWLIEGKKDELKSNVYGQCLSWLKSGLQPRSMTRD-L 241

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGY--LDN----PDGSKAKFWPAD----LHV 262
           DWG+ +P  +     +YVW+DA   Y++ T    LDN     D  K +  P D    +H 
Sbjct: 242 DWGVDVPLEEAEGKKLYVWLDAPIGYISATKQWALDNGKNWEDYWKEQPDPEDNSCLIHF 301

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH I +PA L +  +  LP+ + ++ F+  +G+K+S S  + +   E ++E  
Sbjct: 302 IGKDNIVFHCIIFPAILHAHGDYILPENIPANEFLNLEGDKLSTSRNHAVWLHEYLQEFP 361

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L   +    D  +     + RVN +L   +GN ++R + +  K +DG I +
Sbjct: 362 GKQDELRYVLTSILPETSDSEFTWKDFQARVNNELVAILGNFINRVMVLSHKYFDGKILS 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + D+ + +   +  ++I  ++       ALAQ +++    ++Y    +PW++ KT
Sbjct: 422 GSDLQDEDKQVFAELKKYPEQITHSINQYRFREALAQFMNVARLGNKYLAEAEPWKVIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + +R  TVL V++++   LAIL Q F+PK A K+F++L +  ++      +  LK G  L
Sbjct: 482 DEERVKTVLNVSLQIAANLAILAQPFLPKTATKLFEMLNLPQQDWERAGEENLLKDGHEL 541


>gi|317492497|ref|ZP_07950925.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919489|gb|EFV40820.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 684

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I ADV  RF R+ G +V F    D HG  I   AQ  
Sbjct: 12  KILVTCALPYANGSIHLGHMLEHIQADVWVRFQRMRGNEVHFICADDAHGTPIMLKAQQL 71

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  +   S+   +D +D  +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 72  GIEPEQMIAAVSQEHQKDFSD-FNISYDNYHSTHSEENRELSSLIYGRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPI 189

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 190 MRESEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L     D S  +FW  D      H IGKDI+ FH
Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFKNLCEKRSDLSFDEFWRKDSSTELYHFIGKDIVYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  VF HG++   G K+SKS G  +     ++ +  D LRY+   
Sbjct: 307 SLFWPAMLEGSNFRKPSNVFVHGYVTVNGAKMSKSRGTFVQARTYLDHLDPDCLRYYYAA 366

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A    D ++
Sbjct: 367 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKLSEHLA----DPAL 422

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                    EI +  +N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 423 YQTFVNAADEIAQAYENRESGKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 483 SMGINLFRVLMTYLKPVLPSLSER 506


>gi|197284543|ref|YP_002150415.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|226710913|sp|B4ESY6|SYM_PROMH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194682030|emb|CAR41525.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 675

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 228/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++ S+  +      +ISYD++  T  + +      ++  +   G I     S
Sbjct: 67  GITPEAMIEEMSKEHQQDFAGFNISYDNYHSTHSEENRQLSTKIYLALKKNGHIKSKTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             Y   ++  +  D   KG      A  QY        + ++P + +             
Sbjct: 127 QLYD-EEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGSTYSPTELINPRSVVSGSTPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF L A+ + L  +  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RETEHYFFDLPAFSNMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW----PADL-HVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L    G  S  +FW      DL H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFLNLCEKRGDLSFDEFWNKESKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++    D LRY+   +
Sbjct: 303 LFWPAVLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K +DG +    A    D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----AANLDDAKLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                + + I +  +N+   +A+ ++++L  E +RY D + PW + K     A    +  
Sbjct: 419 QHFVDMQESIAQCFENREFGKAIREIMALADEANRYIDEKAPWVVAKQEGKEAELQAICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L  +
Sbjct: 479 MGINLFRVLMTYLKPILPSLTER 501


>gi|156933303|ref|YP_001437219.1| methionyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156531557|gb|ABU76383.1| hypothetical protein ESA_01115 [Cronobacter sakazakii ATCC BAA-894]
          Length = 690

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 231/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 19  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    +     +++ ++ + G I     
Sbjct: 79  LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 138

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 139 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 197

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 198 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 254

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      HVIGKDI+ F
Sbjct: 255 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHVIGKDIVYF 314

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 315 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 374

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D +
Sbjct: 375 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPA 430

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 431 LYQTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 490

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+L  +
Sbjct: 491 CSMGINLFRVLMTYLKPVLPELCAR 515


>gi|310822488|ref|YP_003954846.1| methionyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395560|gb|ADO73019.1| Methionyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 708

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 245/546 (44%), Gaps = 49/546 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK+ +++A+ Y N   HIGH  E +  D+  RF R  G +V++    D HG  I   A  
Sbjct: 3   EKILVTSALPYANGPIHIGHVVEYVQTDIYVRFLRSCGKNVVYFCADDTHGTPIELNAAK 62

Query: 65  AGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+  + FV +     R D AD  DIS D F  T    +     +++ ++ +KGDI +  
Sbjct: 63  QGLKPEEFVARCYELHRKDFAD-FDISVDYFHSTHSPENRAYSELIYGRLKEKGDIERRD 121

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWMEEEGYFFRLSA 171
               Y  +D+ +   D   KG      A  QY ++       ++P   ++          
Sbjct: 122 IEQTYCEKDKRFL-PDRFIKGTCPNCKAKDQYGDSCEKCGKAYSPTDLIDPHCSLCGTPP 180

Query: 172 YQDK---LLSYYESHPEFILPIERR---------NEVISFVKSGLKDLSLSRKTFDWGIK 219
            + +   L      H  F+  + RR          ++  F + GL D  +SR    +G  
Sbjct: 181 VRKRSTHLFFKLSRHEAFLRELLRRPGFLNQGLATQLQGFFEKGLADWDISRDGPYFGFA 240

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRFH 271
           IP +     YVW+DA   Y+ TT       G   S   +W  D     +H IGKDI+ FH
Sbjct: 241 IPGETDKYFYVWLDAPIGYIATTEKWAQETGKAKSALDYWGPDSNTRIVHFIGKDIVYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P +V +HG +   GEK+SK+ G +I   + ++++    LR+F   
Sbjct: 301 ALFWPAVLKVADLHGPDEVKAHGHLTVNGEKMSKTRGTLIPARDYLDKLDPSYLRFFYAA 360

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +  G + F       + RVN +L N +GNL +R+++M+    +  +  PG+       +
Sbjct: 361 CLGSGPEDFDLSLKDFRLRVNGELVNNVGNLANRALTMLAGPLEKRL-APGSTGAGKALV 419

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +  +RV  E+RE  +      A+  ++ +    + +  AQ PW   KT+ + A   L  
Sbjct: 420 EAALARV-PEVREAFEKLEYRNAIKAIVEISQTANAFLQAQAPWAKVKTDAEGARADLSD 478

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL------FVADENRCFQSLDQRLKPGFMLHKTFD 504
             +V+  L  LL   +P++ +K+F  L      F A E   +  LD+    G     T +
Sbjct: 479 AADVVYLLGALLAPVIPRVTDKLFAQLGAPPLTFAALETARYPLLDRSRPIG-----TPE 533

Query: 505 PIFPRF 510
           P+ PR 
Sbjct: 534 PLLPRL 539


>gi|309812809|ref|ZP_07706547.1| methionine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308433226|gb|EFP57120.1| methionine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 635

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 247/563 (43%), Gaps = 95/563 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   KVLSAVAWPYANGPRHIGHVAGFGVPSDVYSRYMRMAGHDVLMVSGTDEHGTPIVIMAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + F D+N+    D    L +SYD F RTT   H++  + L+  + + G + +   
Sbjct: 63  AGKTPQEFADENASIIVDDLVGLGLSYDLFTRTTTANHYEVVQKLFLALHENGYMVEQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
           SG  S        D  +        Y  A G   +   N +                 ++
Sbjct: 123 SGAISPSTGRTLPDRYIEGTCPICKYAEARGDQCDNCGNQLDPTDLIDPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + +F  L A  D L S+ +           R  VI F ++ L+++     T   DWG
Sbjct: 183 IETQHFFLDLPALADALSSWLDGREATGT---WRPNVIKFSQNILEEIRPRAMTRDIDWG 239

Query: 218 IKIPDD-----PQYIMYVWIDALTNYLTTT----GYLDNPD------------GSKAKFW 256
           I +P D     P   +YVW DA+  YL+ +      L  PD            G  A+  
Sbjct: 240 IPVPLDGWREQPTKRLYVWFDAVVGYLSASIEWARRLGEPDKWREWWNAPASTGGDAELA 299

Query: 257 PADL---------------------------HVIGKDILRFHAIYWPAFLLSAN------ 283
            A+                            + +GKD + FH+  WPA LL+AN      
Sbjct: 300 RAERATSDEGSVGAQKASEVLGNSDGVAVSKYFMGKDNIVFHSQIWPAELLAANGEGAKG 359

Query: 284 --------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                   L LP +V S  F+  +G++ S S G+VI   +V+E  G D LRYF+V     
Sbjct: 360 GVESPFGHLNLPSEVVSSEFMTMEGKQFSTSRGHVIYVKDVLERYGPDPLRYFIVAAGPE 419

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +      +R N++L  G GNLV+R+ SMI K++ G IP P    + D  +L    
Sbjct: 420 SQDADFTWAEFVQRNNSELVAGWGNLVNRAASMIHKNF-GEIPAPSELADVDREVLDAVR 478

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV 454
                +   ++   +  AL + + LV EV+RY    +P++LK  +  +R +TVL+   + 
Sbjct: 479 GGFATVGALIERNRLKAALTETMRLVGEVNRYVAVTEPFKLKGEDERERLATVLHTLAQC 538

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  L  ++  FVP  AN + +++
Sbjct: 539 VVDLNTMMAPFVPFSANLVHEVM 561


>gi|187649791|sp|A7MHL3|SYM_ENTS8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 231/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      HVIGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHVIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D +
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYQTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+L  +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPELCAR 502


>gi|146312363|ref|YP_001177437.1| methionyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145319239|gb|ABP61386.1| methionyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 680

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGISPEQMITEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  +   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 129 SQLFD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 188 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 245 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 305 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 364

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 365 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIGKRFDGVM----AAELADPA 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  + +   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 421 LYKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P L+ +
Sbjct: 481 CSMGINLFRVLMTYLKPVLPTLSER 505


>gi|325281890|ref|YP_004254432.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313699|gb|ADY34252.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 676

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 248/516 (48%), Gaps = 42/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  I+TA+ Y N   HIGH A   + AD+  R+ R  G +V+F  G+DEHG  I 
Sbjct: 1   MAKFKRNLITTALPYANGPVHIGHLAGVYVPADIYVRYLRQKGEEVVFIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             AQ  GVT +  VD+  +  +D  +   IS+D + RT+ K HH+     +KK+ D+G  
Sbjct: 61  IKAQKEGVTPQDIVDRYHQIIKDSFEEFGISFDIYSRTSSKTHHELSSAFFKKLYDEGKF 120

Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQH---------- 154
            +     +Y  +   +  D           +E   G    A G   NA            
Sbjct: 121 IEKTSMQFYDEKAGQFLADRYIVGKCPHCGNERAYGDQCEACGTSLNATDLIDPVSAVTG 180

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           N  +  E + ++  L  Y+D L  +  E H E+   +    +  S++ +GL+  +++R  
Sbjct: 181 NKPELKETKHWYLPLDRYEDWLKEWILEDHKEWKSNV--YGQCKSWLDNGLQPRAVTRD- 237

Query: 214 FDWGIKIPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
            DWG+ +P D     ++YVW DA   Y++ T  L  P+  K  +W       +H IGKD 
Sbjct: 238 LDWGVPVPLDEAKGKVLYVWFDAPIGYISATKDL-TPEWEK--YWKDPETRMIHFIGKDN 294

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--EVGVDA 324
           + FH I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +   E   D 
Sbjct: 295 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLRDFEGKQDV 354

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N++L    GN ++R++ +  K + G++P  G   
Sbjct: 355 LRYVLTANAPETKDNDFTWKDFQARNNSELVAIYGNFINRALVLTQKYFGGIVPERGELA 414

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D+ +L+    ++  + +N+ N      L + ++L    ++Y    +PW+L KT+  R 
Sbjct: 415 DYDKEVLAEIPEIISRVEKNLDNFHFREGLKECMNLARLGNKYLADTEPWKLIKTDEARV 474

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            T+L + +++   L+ L + F+P  A+K+ D L +A
Sbjct: 475 KTILNICLQIAGDLSTLTEPFIPFSASKLRDFLNIA 510


>gi|187649790|sp|A4WCF6|SYM_ENT38 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGISPEQMITEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  +   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLFD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 302 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 361

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D +
Sbjct: 362 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIGKRFDGVM----AAELADPA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  + +   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 418 LYKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P L+ +
Sbjct: 478 CSMGINLFRVLMTYLKPVLPTLSER 502


>gi|332045074|gb|EGI81267.1| methionyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 697

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 238/506 (47%), Gaps = 39/506 (7%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV F  G+DEHG  I   A+  GV
Sbjct: 18  ITAALPYTNGPIHIGHLAGVYVPADIYARYKRLTGNDVAFICGSDEHGVPITIKAKKEGV 77

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+  +  +D  +   I++D++ RT+ K HHDT    +K + DK +  +      
Sbjct: 78  TPQQIVDRYHKIIKDSFEDFGITFDNYSRTSAKIHHDTASEFFKTLYDKNEFVEEVSEQL 137

Query: 128 YSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------------EE 162
           Y      +  D           +E   G   +     HN    +              E 
Sbjct: 138 YDAEANQFLADRFVIGTCPKCGNEESYGDQCEKCGTSHNATDLINPKSAITGNVPTLKET 197

Query: 163 EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + +F  L+ ++  L  +  E H +   P     +V S++  GL+  +++R   DWGI +P
Sbjct: 198 KHWFLPLNKHEQFLKDWILEGHKKDWKP-NVYGQVKSWIDDGLRPRAVTRD-LDWGIPVP 255

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIY 274
                  ++YVW DA   Y++ T      +G     +W  +    +H IGKD + FH I 
Sbjct: 256 VPGGEGKVLYVWFDAPIGYISATKEWAAREGKDWEPYWKDEDTKLVHFIGKDNIVFHCII 315

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331
           +PA L +  +  LP  V ++ F+  +G K+S S    +   E +++     D LRY L  
Sbjct: 316 FPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLPEYLQDFPNKQDVLRYALTA 375

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + R N +L    GN ++R V +  K Y+G++P PG ++  D+  L
Sbjct: 376 NAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGIVPKPGEYSSVDQETL 435

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +  +     I  +++      A  ++++L    ++Y   ++PW+L KT+ +R  T+++V 
Sbjct: 436 AAINAYPSVIESSLERYRFREASQELMNLARLGNKYLADEEPWKLIKTDGERTKTIMFVA 495

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           +++   LAIL + F+P  + K+  IL
Sbjct: 496 LQIASALAILSEPFLPFTSAKLKSIL 521


>gi|255036715|ref|YP_003087336.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949471|gb|ACT94171.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 691

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 251/533 (47%), Gaps = 48/533 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   HIGH A   + AD+  R+ R  G DV F +GTDEHG  I   A+  G+
Sbjct: 11  VTAALIYANGPIHIGHLAGCYVPADIYVRYLRSSGKDVAFISGTDEHGVPITIRAKKEGL 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+           L IS+D + RT++  HH+T R +++ + DK    +     +
Sbjct: 71  TPQQVVDKYYEQIDASFKALGISFDIYSRTSKPVHHETSREIFRDLYDKKVFIEETTEQY 130

Query: 128 YSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME--------------E 162
           Y    + +  D  +             G   +   +  +P++  +               
Sbjct: 131 YDETAQQFLADRYIVGTCPVCANPNAYGDQCERCGSTLSPLELKDPRSTLSGAKPVLKAT 190

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           + ++  L   Q  + +Y   H E+   +    +  S++K GLK  +++R   DWGIK+P 
Sbjct: 191 KNWYLPLDKMQPDIEAYVNGHSEWKTNV--FGQCQSWLKDGLKPRAMTRD-LDWGIKVPV 247

Query: 222 -DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK---AKFW-PAD---------LHVIGKD 266
            D    ++YVW +A   Y++ T  +L   +G+     K+W PA          +H IGKD
Sbjct: 248 EDTEGKVLYVWFEAPIGYISATKDWLIQKNGTDEGWKKWWQPAADASEGETKLVHFIGKD 307

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH I +PA L++  N  L   V ++ F+  +G+KIS S    +   E +EE+    D
Sbjct: 308 NIVFHCIIFPAMLMAEGNYILADNVPANEFMNLEGDKISTSRNWAVWLHEYLEELPDKQD 367

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N++L    GN ++R+V +  K  +G +P  GA 
Sbjct: 368 VLRYVLTANAPETKDSEFTWKDFQTRNNSELVGIYGNFINRAVVLTQKFCEGKVPQRGAL 427

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D++ L   +   Q+I + M+N     AL  ++ L    ++Y    +PW + KT+P+R
Sbjct: 428 QEIDQAALKDLAAFPQKIADAMENYRFREALTLIMDLARTGNKYLADTQPWHVIKTDPER 487

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            +T+L + +++   L+I+ +  +P  A KI + L ++ +N         L PG
Sbjct: 488 VNTILNIALQISATLSIVSEPVLPFTAAKIQEQLGLSGKNWQDAGHADLLTPG 540


>gi|13542051|ref|NP_111739.1| methionyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|25009385|sp|Q979B7|SYM_THEVO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14325482|dbj|BAB60386.1| tRNA synthetase Met [Thermoplasma volcanium GSS1]
          Length = 543

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 248/514 (48%), Gaps = 51/514 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ ++ A+ Y N   H+GH A   + ADV  RF+RL G +VL+ +G+DE+G  I   A+ 
Sbjct: 5   KILVNCALPYANGPLHVGHIAGAYLGADVFVRFNRLIGNEVLYVSGSDEYGTPITVRAEK 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +   D+      +    L I++D F+RTT   H    +  + K+ ++G I KG  
Sbjct: 65  EGKSPQEIADRYYAEHIETFKKLGINFDIFMRTTYPEHSSVAQEFFLKLLNEGVIEKGTM 124

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPV--------QW 159
              Y  +   +  D  +        YK A G Q  N           NPV        ++
Sbjct: 125 IAPYCRKIGRFMPDRYIEGECPYCGYKKARGDQCDNCGRTLDPQELINPVCILSGETPEF 184

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEF---ILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            E E +F RL  ++++L  + ++   +   +L   R     +F++ GLK  +++R   DW
Sbjct: 185 RETEHFFLRLDLFEERLEEWLKTKTFWKPNVLAYTR-----NFIQGGLKKRAITRD-IDW 238

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--------ADLHVIGKD 266
           G+K+P +      +YVW +AL  Y+T         G K  +W          + + IGKD
Sbjct: 239 GVKVPLEGYEHKRIYVWFEALIGYITGAKMFSEVIG-KPNYWKEFYFDKDVKNYYFIGKD 297

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            + FH+I WPA LL    L LP  + ++ ++  KGE+ SKS G      E++  +  D L
Sbjct: 298 NIPFHSIIWPAMLLGYGELNLPYDIPANEYLTFKGEQFSKSRGIGYTVDELLRVIPPDYL 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY++   +    D  +  + L K VN+DL +  GN V R++S I K YD  I  P +   
Sbjct: 358 RYYVASILPETGDSDFSLEELVKTVNSDLIDKYGNFVHRTLSFINK-YDLKITKPNSL-- 414

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +DE+         +E  + +    I R+LA  ++L    + YF+  +PW L KT+ D+ +
Sbjct: 415 NDEA-FEYAQNAFKEYCDELSQVHIKRSLAIWLNLAIYANSYFNKSEPWNLIKTDRDQCN 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             LYV++++ + L  ++  F P  A  I++ L V
Sbjct: 474 YKLYVSLKLAQYLTAMIYPFTPTSAKAIWEQLGV 507


>gi|288932631|ref|YP_003436691.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894879|gb|ADC66416.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 658

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 230/503 (45%), Gaps = 46/503 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    I ADV  R+ RL G +V+F  G+D HG  I   A+  G+ 
Sbjct: 4   VTCGLPYANGKAHIGHLRTYIPADVYVRYLRLRGEEVIFVCGSDSHGTPIVVNAEQQGLK 63

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K  VD   ++F+++   L + +D + RT    HH+  R + KK+ +KG +Y       Y
Sbjct: 64  PKELVDIYHKHFQEIFKSLRVEFDFYGRTDSDYHHERTREIVKKMIEKGYVYPKEIELAY 123

Query: 129 SLRDEAYYNDDEV-----YKGADGQYYNAQH--------------------NPVQWMEEE 163
               E +  D  V     Y GA+ +                           P  + +++
Sbjct: 124 CPNCERFLPDRYVEGICPYCGAEARGDECDQGCGRHLEPGEILKPRCKICGTPAIFKKQK 183

Query: 164 GYFFRLSAYQDKLLSYYE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            YFF+LSA++D L  Y E     E  L     N    +V+  LKD  ++R   +WG+K P
Sbjct: 184 HYFFKLSAFKDFLEDYLEKLKGTENAL-----NYAKEWVRKELKDWCITR-NLEWGVKFP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW---PAD-LHVIGKDILRFHAIYWP 276
            +   ++YVW+DA   Y++ T       G   +  W    AD +H IG DI+  H I+WP
Sbjct: 238 GEEDLVVYVWVDAPIGYISFTEKACEKLGKDWREIWIEGKADIIHFIGLDIVYHHCIFWP 297

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV--IDPIEVIEEVGVDALRYFLVREIA 334
           A L +A+  LP  V + G +  +G+  SKS G V  +D   + E    D LRY++V   +
Sbjct: 298 AMLKAADYALPSAVVASGMVKVEGKTFSKSRGYVVWVDEDYLNEGFDPDCLRYYVVNYTS 357

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +  +  K++VN +L   +GN + R +    +++  +          D  ++   
Sbjct: 358 HQKDLNFSWEVYKEKVNNELIATLGNFIYRVLHFAWRNFGEVK------MNVDGEVIEQI 411

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + +I E ++      A    + L S  + YF   +PWEL K +P+ A   +   + +
Sbjct: 412 RLAMNKIDEAIEKWEFKEASDAFMELASYGNVYFQNAQPWELIKNDPESAERAVASCLAL 471

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +R L IL    +P    KI  ++
Sbjct: 472 VRALTILAYPVLPSTMEKIGKLI 494


>gi|251797136|ref|YP_003011867.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247544762|gb|ACT01781.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 551

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 242/533 (45%), Gaps = 66/533 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   G
Sbjct: 4   IFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGNPVLYVSGSDCHGTPVAVQALQEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+     D+  + F D    L  +Y+ + RT ++ HH   + L+  + + G +YK     
Sbjct: 64  VSPGDIADRYHQEFTDCFQKLGFTYNLYTRTDQEFHHKVVKELFISLLENGYLYKKTIQQ 123

Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEE-------------- 162
            Y   D  +  D  V           +G    Y +   +P    ++              
Sbjct: 124 TYCETDRRFLPDRYVEGTCPVCGNRARGDQCDYCSTLLDPADLTDKTCKICGNPPVERPT 183

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           E Y+  LS +QD +LS Y  H +      + I +R     +++ GLKD +++R    WG+
Sbjct: 184 EHYYISLSLFQD-VLSEYVDHADGWKDNAVQITKR-----YLREGLKDRAVTRD-LTWGV 236

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLH------VIGKDI 267
            +P    +D +  +YVWI+A++ YL+ +  +     GS   FW    H      V GKD 
Sbjct: 237 DVPVKGFEDKK--IYVWIEAVSGYLSASKQWAAETGGSWELFWQEGKHQLTAYYVHGKDN 294

Query: 268 LRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH + WPA LL A  L LP ++ S  ++  +G+K S S    +   +++     D++R
Sbjct: 295 VPFHTVIWPALLLGARGLHLPDRIISCEYMTLEGKKFSTSNNWAVWVPDILSRYQPDSIR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+      +D  +         N +L    GNLV+R++S I K ++G+IP      E 
Sbjct: 355 YFLIANGPENRDTDFSWREFIHSHNGELLGAFGNLVNRTLSFIDKSFEGLIPEGNLNDEW 414

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            ++I    +R    I E      +  A+  + + V   ++YFD +KPW   K +      
Sbjct: 415 KQTIDDCYTRSGALIEEGH----LKEAIEHIFASVRRANKYFDERKPWLQIKEDKAACGN 470

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            L+ +V++I  L+ LL  F+P          F  +E R F +LDQ   PG+  
Sbjct: 471 TLHASVQIIANLSRLLNPFIP----------FACEEIRKFLTLDQ---PGWTF 510


>gi|171741863|ref|ZP_02917670.1| hypothetical protein BIFDEN_00959 [Bifidobacterium dentium ATCC
           27678]
 gi|171277477|gb|EDT45138.1| hypothetical protein BIFDEN_00959 [Bifidobacterium dentium ATCC
           27678]
          Length = 620

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 256/554 (46%), Gaps = 73/554 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+ +  + G IYKG  
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        G+DG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVI 263
           GI IP     D+P   +YVW DA+  YL+ +         PD  +A +W A      + +
Sbjct: 236 GIPIPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRA-WWNAPTTPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  +++
Sbjct: 355 VIYVKDILSRYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP     + T+ D ++L+  +     I   ++N     AL++ + +V ++++Y
Sbjct: 415 NKNF-GEIPALDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             A +PW++K  NP R  TVL+V  + +     LL  F+P  A K+++ L          
Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532

Query: 488 SLDQRL---KPGFM 498
            L++     KPGFM
Sbjct: 533 RLEEVEDLDKPGFM 546


>gi|320095639|ref|ZP_08027299.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977434|gb|EFW09117.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 613

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 243/530 (45%), Gaps = 71/530 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA   
Sbjct: 4   ILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADGE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124
           GV+ +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +    
Sbjct: 64  GVSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQVTR 123

Query: 125 -----SGWYSLRDEAYYNDDEVYKGADG----QYYNA--QHNPVQ--------------W 159
                S   +L D  Y        GA+G    Q  N   Q +P +              +
Sbjct: 124 AAISPSTGRTLPDR-YIEGTCPICGAEGARGDQCDNCGNQLDPTELIDPRSRINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKT-- 213
           +E   YF  L A    L  + +         ER    R  VI F K+ L+D+     T  
Sbjct: 183 VESTHYFLDLPALARALSDWLDER-------ERSGTWRPNVIKFSKNFLEDIRPRAMTRD 235

Query: 214 FDWGIKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HV 262
            DWGI +P   D P   +YVW DA+  YL+ +        +P+  + K+W  P  L  + 
Sbjct: 236 IDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWR-KWWNDPDALSYYF 294

Query: 263 IGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FH+  WPA LL  N              L LP +V S  F+  +G+K S S G
Sbjct: 295 MGKDNIVFHSQIWPAELLGYNGQGDRGGRPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHG 354

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SM
Sbjct: 355 IVIYVRDFLERYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASM 414

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           I K + G IP PG   + D ++L         +   +++     AL++ + LV E ++Y 
Sbjct: 415 IAKKF-GEIPAPGELEDIDRALLDAIEAGFATVGGLIRHHRQKAALSEAMRLVGEANKYV 473

Query: 429 DAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               P++LK     +R +TVL+   + +  L ++L  F+P  AN +  ++
Sbjct: 474 TDTAPFKLKAPEQRERLATVLWTLAQAVADLNLMLSPFLPHAANDVDRVM 523


>gi|330465664|ref|YP_004403407.1| methionyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328808635|gb|AEB42807.1| methionyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 600

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 240/533 (45%), Gaps = 70/533 (13%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 3   HVLAAVAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ +R   +    L +SYD F RTT + H+   + L++ +   G I     
Sbjct: 63  EGLTPRELADRYNRVIVEDLHGLGLSYDLFTRTTTRNHYAVVQELFEGMYRNGYIVPKTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNA---QHNPV--------------QW 159
            G  S        D  +        Y  A G   +    Q +P+              ++
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGYGSARGDQCDNCGNQLDPIDLIDPKSKINGETPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
           +E E +F  L A  D L  + ++   +      R  V+ F K+ L DL     T D  WG
Sbjct: 183 VETEHFFLDLPALADVLRQWLDTREGW------RPNVLRFSKNLLDDLQPRAITRDLEWG 236

Query: 218 IKIPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD--------LH 261
           + IP D         +YVW DA+  YL+ +       G      ++W  D         +
Sbjct: 237 VPIPLDDWRERTDKRIYVWFDAVIGYLSASIEWARRSGDPEAWRRWWSTDGAGKDAQAYY 296

Query: 262 VIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSL 307
            +GKD + FH++ WPA L                  L LP +V S  F+  +G K S S 
Sbjct: 297 FMGKDNIVFHSVIWPALLAGYSGEGSRDGEPGQLGRLNLPTEVVSSEFLTMEGRKFSSSR 356

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             VI   + +E    DALRYF+        D  +      +R N +L  G GNLV+RS+S
Sbjct: 357 RVVIYVRDFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSIS 416

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           M  K++ G IP   P   TE+DE++L+V       + + +      +A+ + + +V+E +
Sbjct: 417 MAAKNF-GQIPAVDPNGLTEADEALLAVARAGFTTVGDLIARHRQKQAIGEAMKVVAEAN 475

Query: 426 RYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y   Q PW+LK + +  R  T+L+V ++V+     LL  F+P  A K+ ++L
Sbjct: 476 KYLSDQAPWKLKDEADKPRMGTILHVALQVVSDANTLLTPFLPHSAQKVHELL 528


>gi|325067299|ref|ZP_08125972.1| methionyl-tRNA synthetase [Actinomyces oris K20]
          Length = 615

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 241/529 (45%), Gaps = 65/529 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +   
Sbjct: 63  EGLSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVT 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPV--------------Q 158
                 S   +L D  Y        GADG   +       Q +P               +
Sbjct: 123 RSAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDTCGNQLDPTDLISPRSRINGETPE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           ++E   +F  L A    L ++ +   E       R  VI F ++ L D+     T   DW
Sbjct: 182 FVETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLGDIRPRAMTRDIDW 238

Query: 217 GIKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGK 265
           GI +P   D P   +YVW DA+  YL+ +        +P+  +A +W  P  L  + +GK
Sbjct: 239 GIPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGK 297

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI
Sbjct: 298 DNIVFHSQIWPAELLGYNGQGAAGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVI 357

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K
Sbjct: 358 YVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHK 417

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            + G IP P    + D ++L         + E +       AL + + LV E ++Y    
Sbjct: 418 RF-GRIPEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAALGEAMRLVGEANKYVADT 476

Query: 432 KPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +P++LK  +P    R +TVL+   + +  L ++L  F+P  AN +  +L
Sbjct: 477 QPFKLKGEDPATQARLATVLHTLAQAVTDLNLMLSPFLPHAANDVDRVL 525


>gi|167753846|ref|ZP_02425973.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216]
 gi|167658471|gb|EDS02601.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216]
          Length = 680

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 240/506 (47%), Gaps = 44/506 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   I +D+  R+ RL G DV+   G+DEHG  I   A+  GV
Sbjct: 10  VTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLKGYDVISVCGSDEHGVPITIKARKEGV 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+  +  +   + L +S+D + RT+ K H  T    ++K+ D+G   +     +
Sbjct: 70  TPQQIVDRYHQLIKSSFEGLGMSFDIYSRTSSKTHAATASEFFRKLYDEGKFIERTSEQY 129

Query: 128 YSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWMEEEG----------- 164
           Y    + +  D            D  Y G   +   +  +P + +               
Sbjct: 130 YDEETQTFLADRYIVGTCPRCGNDRAY-GDQCEKCGSTLSPDELINPHSAVSGSVPVKRA 188

Query: 165 ---YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              ++  L  Y+  L  +  E H E+   +    +  S++  GL+  ++SR   DWGI +
Sbjct: 189 TKHWYLPLDQYEGFLREWILEGHKEWKTNV--YGQCKSWLDGGLQPRAVSRD-LDWGIPV 245

Query: 221 PDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIY 274
           P +     ++YVW DA   Y++ T  L  PD  K  +W  +    +H IGKD + FH I 
Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISATKDL-TPDWEK--YWKDEETKMVHFIGKDNIVFHCIV 302

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331
           +PA L +     LP+ V ++ F+  +GEKIS S    +   E + +     D LRY L  
Sbjct: 303 FPAMLKAHGGYILPENVPANEFLNLEGEKISTSRNWAVWLHEYLADFPGKEDVLRYVLCA 362

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + R N +L   +GN V+R++ +  K +DG +P  GA T+ D   L
Sbjct: 363 NAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTHKYFDGAVPACGALTDYDRETL 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              S   + +  N++N     AL + +++    ++Y    +PW+L KT+P+R  T+L + 
Sbjct: 423 RELSGAKEALENNIENYRFREALKEAMNIARLGNKYLADTEPWKLIKTDPERVKTILNIA 482

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           +++   L+I ++ F+P  A KI  +L
Sbjct: 483 LQITANLSIAIEPFMPFSAKKIVGML 508


>gi|120553871|ref|YP_958222.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|187647734|sp|A1TZ66|SYM_MARAV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120323720|gb|ABM18035.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 678

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 229/504 (45%), Gaps = 42/504 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+  RF  + G +  +    D HG  I   
Sbjct: 6   KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRFQNMRGHNCYYVCADDAHGTAIMLR 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  +D+  +  ++      I +D++  T  + +      +++++ D   I  
Sbjct: 66  AEREGITPEQLIDRIRQEHQEDFAGFHIRFDNYYSTHSEENQYFSEYIYRQLKDNDHIAT 125

Query: 122 GCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM---------- 160
              + ++    E +  D            E   G + +   A + P + +          
Sbjct: 126 RKITQFFDPEKEMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 185

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFF+L  + D L  +  S     L  +  N++  ++ +GL++  +SR    +
Sbjct: 186 PVEKESEHYFFKLPEFHDFLSKWTRSG---ALQPQVANKLAEWLDAGLQEWDISRDAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   YL +   L N +G     FW  D      H IGKDI+ F
Sbjct: 243 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKKDSSAEVYHFIGKDIINF 302

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L  A    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 303 HALFWPSMLHDAGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLDPEYLRYYFA 362

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++  G D    + D    RVN+DL   + N+ SRS   I K +DG +   G  TE D+ 
Sbjct: 363 AKLTGGVDDMDLNLDDFAARVNSDLVGKVVNIASRSAGFITKRFDGKL---GKVTEQDK- 418

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
            L       ++I E  + +   RA+ +++ L    ++Y + ++PW + K     D+   +
Sbjct: 419 -LKEFIDAGEQIAEFYEAREFGRAMRRIMELADIANQYVNDEQPWVIAKQEGQDDKLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLAN 471
               + + R L   L   +PK A+
Sbjct: 478 CTNALNMFRLLMTYLAPVLPKTAD 501


>gi|253687680|ref|YP_003016870.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511560|sp|C6DCI4|SYM_PECCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|251754258|gb|ACT12334.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 676

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 229/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEDMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPE 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A+ + L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRDTEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A T +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADTLADAEL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAAASIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLAQR 501


>gi|15669449|ref|NP_248259.1| methionyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501034|sp|Q58659|SYM_METJA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1591898|gb|AAB99269.1| methionyl-tRNA synthetase (metS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 651

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 238/500 (47%), Gaps = 41/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+AY N   H+GHA    I AD++ ++ +L G DV+   GTD HG  I   A+  G 
Sbjct: 5   ITTALAYTNGPLHLGHARSTYIPADIIYKYLKLRGEDVIHVGGTDNHGVPITLTAEKEGK 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  V++     ++  D+L + +D F +T  + H +T +  + K+ + G IY+     +
Sbjct: 65  SPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQF 124

Query: 128 YSLRDEAYYNDDEV-----YKGADGQ-------------------YYNAQHNPVQWMEEE 163
           Y    + +  D  V     Y G + +                   Y        +  + +
Sbjct: 125 YCPNCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKDPYCVICKGKPEIRKTK 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF+LSA + +L  Y ++  E  +P   +N  ++++K  L D  +SR    WG+ IP  
Sbjct: 185 HHFFKLSALKKELEEYIKNAKE--MPEHVKNMALNWIKE-LHDWDISR-DISWGVPIPGT 240

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFL 279
            Q +MYVW++A   Y++ T  L        K+W        H IGKDI   HA++WP  L
Sbjct: 241 NQ-VMYVWLEAPIGYISFTKMLGE---IWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 LS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           ++  +  LP  V S G++  +G K+S S   V+   + ++    D LRY+L+      KD
Sbjct: 297 IAHGSFNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  + I       E D+ +L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDEDRLKEEDKELLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L+ + +N+++     AL  ++ L  E + YF   +PW +   + +R   +LY   + ++ 
Sbjct: 417 LEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--DDEERLKEILYTCCKTVKT 474

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L  LL  ++PK +  + +++
Sbjct: 475 LVYLLYPYMPKKSLALLELM 494


>gi|305665495|ref|YP_003861782.1| methionyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710251|gb|EAR02483.1| methionyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 698

 Score =  186 bits (473), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 254/536 (47%), Gaps = 56/536 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K   +  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV F  G+DEHG  I+
Sbjct: 5   IKSPARYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRLIGKDVAFVCGSDEHGVAIS 64

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T K  +D+     +       I++D++ RT+ K HH T    + K+ ++GD 
Sbjct: 65  MKAKKEGITPKDVIDKYHAIIKKSFVDFGITFDNYSRTSAKIHHKTASDFFVKLHEQGDF 124

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM-- 160
            +   +  Y    + +  D  V     K  + + Y  Q              NP   +  
Sbjct: 125 IEETTAQLYDEEAQQFLADRFVIGTCPKCGNEEAYGDQCENCGSSLNATDLINPKSTITG 184

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVISFVKSGLKDL 207
                 E + +F  L  Y+D L        E+IL   +++       +  S++  GLK  
Sbjct: 185 AIPTLKETKHWFLPLDRYEDFL-------KEWILKGHKKDWKPNVYGQCKSWIDDGLKPR 237

Query: 208 SLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----L 260
           +++R   DWGI +P       ++YVW DA   Y+++T      +G   + +  D     L
Sbjct: 238 AVTRD-LDWGIPVPVKGGEGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDKDTKLL 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P+ L +  +  LP+ V ++ F+  +G K+S S    +   E +EE
Sbjct: 297 HFIGKDNIVFHCIIFPSILKAQGDYILPENVPANEFLNLEGNKLSTSKNWAVWLHEYLEE 356

Query: 320 VG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                D LRY L       KD  +     + R N +L   +GN ++R V +  K YDG++
Sbjct: 357 FPDMQDVLRYTLTANAPETKDNDFTWKDFQARNNNELVAILGNFINRVVVLTNKYYDGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P P  F++ DE  L+   R  + I  +++      A  ++++L    ++Y   ++PW++ 
Sbjct: 417 PEPSNFSKVDEETLAELKRYPEIISGSIERYRFREASQELMNLARLGNKYLADEEPWKVI 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-----DENRCFQS 488
           K + +R  T++YV +++   L++L + F+P  ++K+  IL V+      ENR   S
Sbjct: 477 KEDAERVQTIMYVALQIATGLSVLCEPFLPFTSDKLKRILNVSSSDSTSENRIENS 532


>gi|86134855|ref|ZP_01053437.1| Methionyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821718|gb|EAQ42865.1| Methionyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 684

 Score =  186 bits (473), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 245/515 (47%), Gaps = 41/515 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV + +G+DEHG  I 
Sbjct: 1   MSAPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLKGKDVAYISGSDEHGVAIP 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  +D+     +   +   IS+D++ RT+ + HH T    + K+ ++GD 
Sbjct: 61  MRAKKEGVTPQNIIDKYHTIIKKSFEDFGISFDNYSRTSSEIHHKTASDFFIKMYNEGDF 120

Query: 120 YKGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM------- 160
            +   +  Y    + +  D            +E Y G   +     HN    +       
Sbjct: 121 IEEVTAQLYDAEADQFLADRFVVGTCPKCGFEESY-GDQCENCGTSHNATDLISPKSAIT 179

Query: 161 -------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                  E + +F  L  ++D L  +  E H +   P     +V S+V  GL+  +++R 
Sbjct: 180 GNVPTVKETKHWFLPLDKHEDFLRKWILEGHKKDWKP-NVYGQVKSWVDDGLRPRAVTRD 238

Query: 213 TFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGK 265
             DWGI +P +     ++YVW DA   Y+++T      +G   + +W  D    +H IGK
Sbjct: 239 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKNWEDYWKKDDTKLVHFIGK 297

Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GV 322
           D + FH I +P+ L +  +  LP  V ++ F+  +G K+S S    +   E +E+     
Sbjct: 298 DNIVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQ 357

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY L       KD  +     + + N +L    GN ++R V +  K Y G +PTP  
Sbjct: 358 DVLRYTLTANAPESKDNDFTWKDFQAKNNNELVAIFGNFINRVVVLTNKYYTGAVPTPND 417

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           FTE DE +L+        I ++++      A  ++++L    ++Y   ++PW++ K + +
Sbjct: 418 FTEVDEDVLAAVKEFPNVIGKSIERYRFREASQELMNLARLGNKYLADEEPWKVIKVDEE 477

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R  T++YV +++   LA++ + F+P  + K+  IL
Sbjct: 478 RVKTIMYVALQISAALAVVAEPFLPFTSTKLKGIL 512


>gi|261822290|ref|YP_003260396.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606303|gb|ACX88789.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 676

 Score =  186 bits (473), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAAEQYGDNCEVCGATYSPTELIEPKSAVSGATPE 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           ++PD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A    D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGKL----ADKLVDPDL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAAASIAEAYNSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLAQR 501


>gi|56459820|ref|YP_155101.1| methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|68565965|sp|Q5R0G6|SYM_IDILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56178830|gb|AAV81552.1| Methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 677

 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 224/513 (43%), Gaps = 54/513 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   HIGH    I AD+  RF +L G +  F    D HG  I   AQ  
Sbjct: 7   KILVTNALPYANGPIHIGHMLGYIQADIWVRFQKLRGNECHFVCADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  +    R+   D +D L + +D +  T    + +    ++ ++   G I     
Sbjct: 67  GITPEQMIGDMQRSHESDFSDFL-VGFDHYYSTHSDENRELAETIYTRLDKAGHIKTKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPV--------------QW 159
              Y  + E +  D  V       GA+ QY        A + P               + 
Sbjct: 126 EQLYDPQKEMFLPDRFVKGECPDCGAEDQYGDNCDVCGATYAPTDLKNPKSVVSGAEPEL 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF L A+ D L S+  S     L  E  N++  + + GL+   +SR    +G K
Sbjct: 186 RESEHYFFDLPAFGDMLKSWTRSGS---LQNEMANKLNEWFEQGLQRWDISRDAPYFGFK 242

Query: 220 IPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           IP       YVW+DA         NY +TTG  D        +W AD      H IGKDI
Sbjct: 243 IPGTENKYFYVWLDAPIGYMSSFKNYCSTTGKAD-----WDTYWQADSEAELYHFIGKDI 297

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A+   P  V++HGFI   G K+SKS G  I     +E +  + LRY
Sbjct: 298 IYFHSLFWPAMLKGADFRQPTNVWAHGFITVNGTKMSKSKGTFIKARTYLEHLDPEYLRY 357

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++    D    +     +RVN+DL   + N+ SR    I K +DG + +  A    
Sbjct: 358 YFAAKLTSRIDDLDLNLTDFAQRVNSDLVGKVINIASRCAGFIQKKFDGRLSSNVA---- 413

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRA 444
           D ++L         I E  + +   RA+  +++L    ++Y   ++PW+L  ++ +    
Sbjct: 414 DSALLEDFQLAGDNIAELYEKREFSRAMRDIMALADRANQYIADKEPWQLIKQEGSEQEV 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +  + + + R L + L   VPKL  ++   L
Sbjct: 474 HEICSLGINLFRVLMVYLAPVVPKLTEEVQSFL 506


>gi|227113133|ref|ZP_03826789.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 676

 Score =  186 bits (472), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPE 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A+ + L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRETEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADKLADAEL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
               +     I E   N+   RA+ ++++L    +RY D Q PW + K     +    + 
Sbjct: 418 YKTFTDAATSIAEAYNNRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDEDLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLAQR 501


>gi|283456940|ref|YP_003361504.1| methionyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283103574|gb|ADB10680.1| MetG Methionyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 615

 Score =  186 bits (472), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 255/552 (46%), Gaps = 73/552 (13%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GV
Sbjct: 1   MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKEGV 60

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           + +   ++ +R   +D+ D L +SYD F RTT   H    + L+ +  + G IYKG    
Sbjct: 61  SAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQKV 119

Query: 125 ----SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------QWM 160
               S   +L D  Y        G+DG   +               NPV        ++ 
Sbjct: 120 AISPSTGRTLPDR-YIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPRFE 178

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DWGI
Sbjct: 179 ETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDWGI 232

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGK 265
            IP     D+P   +YVW DA+  YL+ +         PD  +A +W A      + +GK
Sbjct: 233 PIPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRA-WWNAPTTPGYYFMGK 291

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G VI
Sbjct: 292 DNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVI 351

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K
Sbjct: 352 YVKDILSRYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNK 411

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T+ D ++L+  +     I   ++N     AL++ + +V ++++Y  
Sbjct: 412 NF-GEIPALDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKYIS 470

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           A +PW++K  NP R  TVL+V  + +     LL  F+P  A K+++ L           L
Sbjct: 471 ATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRL 529

Query: 490 DQRL---KPGFM 498
           ++     KPGFM
Sbjct: 530 EEVEDLDKPGFM 541


>gi|157369816|ref|YP_001477805.1| methionyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|187647768|sp|A8GC37|SYM_SERP5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157321580|gb|ABV40677.1| methionyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 675

 Score =  186 bits (472), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 229/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSNLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + ++           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 LRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFGGQL----ADKLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                   Q I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFVDAAQSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVMPSLTER 501


>gi|325286637|ref|YP_004262427.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322091|gb|ADY29556.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 692

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 245/519 (47%), Gaps = 39/519 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   +  I+ A+ Y N   HIGH A   + AD+ AR+ R    DV F  G+DEHG  I+ 
Sbjct: 6   KTPSRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRGINKDVAFVCGSDEHGVAISM 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K  +D+     +       I++D++ RT+ + HHDT    +K + DKGD  
Sbjct: 66  KAKKEGITPKQVIDKYHAIIKKSFLDFGITFDNYSRTSAQVHHDTASEFFKNLYDKGDFI 125

Query: 121 KGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM--- 160
           +      Y    + +  D  V     K    + Y  Q              NP   +   
Sbjct: 126 EETTEQLYDAEAKQFLADRFVIGTCPKCGHEEAYGDQCENCGSTLSATELINPKSTVSGA 185

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + +F  L  Y+D L  +  E H     P     +  S++  GLK  +++R   
Sbjct: 186 VPTLKETKHWFLPLDRYEDFLKEWILEGHKNDWKP-NVYGQCKSWIDDGLKPRAVTRD-L 243

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y+++T      +G     +W  +    LH IGKD 
Sbjct: 244 DWGIPVPVPGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKMLHFIGKDN 303

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G K+S S    +   E +E+     D 
Sbjct: 304 IVFHCIIFPSMLKAHGDFILPENVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPDMQDV 363

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R V +  K Y+G++PTP  F+
Sbjct: 364 LRYTLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGVLPTPATFS 423

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E D++ L    +  + I  +++      A  ++++L    ++Y   ++PW++ K + +R 
Sbjct: 424 EIDKATLEEVKKYPEIISSSLERYRFREAGQELMNLARLGNKYLADEEPWKVIKQDEERV 483

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            T++YV +++   LA+L + F+P  ++K+ +IL V+  N
Sbjct: 484 KTIMYVALQIASALAVLSEPFLPFTSDKLKNILNVSAAN 522


>gi|332169738|gb|AEE18993.1| methionyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 695

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 234/514 (45%), Gaps = 47/514 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DV F  G+DEHG  I   A+
Sbjct: 6   QRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGADVAFICGSDEHGVPITIKAK 65

Query: 64  NAGVTTKVFVDQNS----RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GVT +  VD+ +    ++F D      I++D++ RT+ K HHDT    +K + D+G  
Sbjct: 66  KEGVTPQDVVDKYNAIIIKSFEDFG----ITFDNYSRTSAKIHHDTASEFFKNMYDQGKF 121

Query: 120 YKGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM------- 160
            +      Y      +  D            +E Y G   +     HN    +       
Sbjct: 122 IEETNEQLYDAEANQFLADRFVTGTCPKCGFEEAY-GDQCESCGTSHNATDLINPKSAIT 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + +F  L  Y D    +     +         +  S++  GL+  +++R  
Sbjct: 181 GAVPTLKETKHWFLPLDQYNDFFKEWIIEGHKKDWKTNVYGQCKSWIDDGLRPRAVTRD- 239

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y+++T      +G     +W  +    LH IGKD
Sbjct: 240 LDWGIPVPVEGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLLHFIGKD 299

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH + +PA L       LP  V ++ F+  +G K+S S    +   E +EE     D
Sbjct: 300 NIVFHCLIFPAMLKGHGEYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEEFPDQQD 359

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N++L    GNL++R   +  K Y G++PTPG F
Sbjct: 360 VLRYVLTANAPESKDNDFTWKDFQTRNNSELVAIFGNLINRVTVLTHKYYGGVVPTPGTF 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D+ +L         I  +++      + A+ ++L    ++Y   ++PW+  KT+ +R
Sbjct: 420 NELDKEVLDAIKAYPAVIGSSIEKYRFRESQAEFMNLARLGNKYLADEEPWKTIKTDEER 479

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             TV+YV +++   LAIL +  +P  +  + +IL
Sbjct: 480 TKTVMYVALQIATALAILSEPLLPHTSVTLKNIL 513


>gi|264679983|ref|YP_003279892.1| methionyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262210498|gb|ACY34596.1| methionyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 715

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 238/524 (45%), Gaps = 50/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 5   KLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKKAGFIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
            ++   ++  +  D   KG      A  QY +               NP   +       
Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183

Query: 162 --EEGYFFRLSAYQD-KLLSYYESH-----PEFILPIER----RNEVISFVKSGLKDLSL 209
              E +FF+LS  +  + L+ +  +     PE    I+     R         GL D  +
Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQNGKHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPDLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P ++  HGF+ ++ GEK+SKS G  +DP++ +  ++  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363

Query: 323 DALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   I K +DG +   G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDGRL---G 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTN 440
             +E  +++L+        I    + +   RA  +++ L  +V+ Y DA KPWEL KK  
Sbjct: 421 QVSEDGQALLAALREQQAAIVAAYEARDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D R   V    +E  R L I L   +P +A ++   L V  E+
Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVARFLIVPPES 524


>gi|219847897|ref|YP_002462330.1| methionyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782858|sp|B8G6F7|SYM_CHLAD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219542156|gb|ACL23894.1| methionyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 600

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 245/530 (46%), Gaps = 64/530 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + AD+ AR+HRL G  VL  +GTDEHG  I   A 
Sbjct: 3   EHILVAVAWPYANGPRHIGHVAGFGVPADIFARYHRLRGNRVLMVSGTDEHGTPITLVAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D+ ++   D    L +SYD F RTT   H+   + +++ + ++G I +  
Sbjct: 63  KEGTTPQAIADRYNKIIGDDLYNLGLSYDTFTRTTTANHYAVTQDIFRTLYERGYIIRQE 122

Query: 124 YSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWME---------- 161
             G +S        D            DE  +G       +Q +P   +           
Sbjct: 123 TLGAFSATTGRTLPDRYIEGTCPLCGYDEA-RGDQCDNCGSQLDPTDLINPRSKVDGQPP 181

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +F  L A+ ++L  +      +   +  RN  ++F+K  LK  +++R   +WG
Sbjct: 182 VFKPTEHFFLDLPAFAEQLHDWINRQDHWRPNV--RNFSLNFLKD-LKPRAITRD-LEWG 237

Query: 218 IKIPDDPQYI------MYVWIDALTNYLTTT-GYLDN---PDGSKAKFWPAD---LHVIG 264
           + IP  P+Y       +YVW DA+  YL+ +  +  N   PD  +  +   D    + +G
Sbjct: 238 VPIPL-PEYANRDDKKIYVWFDAVIGYLSASIEWAQNSGQPDAWREWWQNPDARHFYFMG 296

Query: 265 KDILRFHAIYWPAFLLSAN-----------------LPLPKKVFSHGFILHKGEKISKSL 307
           KD + FH + WPA LL                    L LP  V S  F+  +G+K S S 
Sbjct: 297 KDNIVFHTVIWPAMLLGYGAGGQFGADPGGKYDGIPLQLPYNVVSSEFLTMEGKKFSSSR 356

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           G VI   + +     DALRYFL       +D  +      +R N +L    GNLV+R++S
Sbjct: 357 GIVIYVNDFLSRYDADALRYFLTIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLS 416

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            + K++ G +P PG  T  DE +L+  +  ++ + E +       ALA+ + L ++V+ Y
Sbjct: 417 NVYKNF-GSVPQPGPLTPVDEQVLAEVTGGIETVGELLAAARFKAALAEAMRLAAQVNIY 475

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              Q+PW++ K++ +RA+T+ YV +  +  L I+   F+P  + ++ + L
Sbjct: 476 LSEQEPWKVIKSDHERAATIWYVALRCVDTLKIIFTPFLPFSSQRLHEYL 525


>gi|237808288|ref|YP_002892728.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511563|sp|C4LEX5|SYM_TOLAT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|237500549|gb|ACQ93142.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 675

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 226/501 (45%), Gaps = 42/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E + AD+  RF R+ G ++ F    D HG  I   AQ  G
Sbjct: 8   ILVTCALPYANGSIHLGHMLEHVQADIWVRFQRMRGHNIHFICADDAHGTPIMLKAQQLG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S+  +       IS+D++  T    +     +++ K+ D G I     S 
Sbjct: 68  ITPEEMIAAVSQEHQTDFAGFKISFDNYHSTHSDENRYFSELIYTKLKDNGFIKSKTISQ 127

Query: 127 WYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------------E 161
            Y      +  D  V             G + +   A ++P + +              E
Sbjct: 128 LYDPEKNMFLPDRFVKGTCPKCKAVDQYGDNCEVCGATYSPTELINPKSAVSGATPVMKE 187

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L  + D L ++  S     L  E  N++  +  SGL    ++R    +G +IP
Sbjct: 188 TEHFFFDLPQFADMLQAWTTSG---ALQEEISNKLNEWFTSGLHQWDITRDAPYFGFEIP 244

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWP----ADL-HVIGKDILRFHAIY 274
             P    YVW+DA   Y+ +   L +  G      FW     A+L H IGKDI+ FH+++
Sbjct: 245 GAPGKFFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWSQNSDAELYHFIGKDIVYFHSLF 304

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  A    P  +F HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 305 WPAMLDGAGFRKPSNIFVHGYVTVNGAKMSKSRGTFIKASTYLQHLDPECLRYYYAAKLN 364

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D   + D    RVN+D+ N + NL SR+   I K  DG +    A T S+ ++ + 
Sbjct: 365 NRIDDLDLNLDDFVARVNSDVVNKLVNLASRTAGFITKRLDGKL----ADTLSEPALYAT 420

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
            +   + I E  +N+   RA+ ++++L  E +RY D + PW + K     A  S V   T
Sbjct: 421 FTSASERIAEAYENREFSRAIREIMALADEANRYVDEKAPWVIAKQEGQEAELSAVCSTT 480

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           + + R L   L+  +P+LA +
Sbjct: 481 LNLFRVLMTYLKPVMPELAAR 501


>gi|145588832|ref|YP_001155429.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047238|gb|ABP33865.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 556

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 234/526 (44%), Gaps = 57/526 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +L +++A+ Y N Q HIGH  E +  D+  R+ R+ G +V +    D HG  I   A+
Sbjct: 5   QRRLLVTSALPYANGQIHIGHLVEYVQTDIWVRYQRMRGHEVHYVGADDTHGTPIMLRAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +    +  +   D   IS+D++  T    +    + ++ K+ D G I K  
Sbjct: 65  KEGITPKELIANVWKEHKRDFDNFLISFDNYYTTDSPENEKLAQSIYLKLRDAGLIEKRA 124

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161
               Y    E +  D     E  K GA  QY        A ++P                
Sbjct: 125 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEKCGATYSPTDLKNPFSVVSGATPI 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
               + YFF+LS  + +      +  +  L  E RN++  +V     S L D  +SR   
Sbjct: 185 KKVSDHYFFKLSDPRCETFLREWTQVKTPLQPEARNKMKEWVGEPGDSKLGDWDISRDAP 244

Query: 215 DWGIKIPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            +G +IPD P    YVW+DA         NY    G L+  +  K        H IGKDI
Sbjct: 245 YFGFEIPDAPGKYFYVWLDAPIGYYASFLNYCQAKG-LNFEEWVKPDTTTEQYHFIGKDI 303

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           L FH ++WPA L  A    P  VF+HGF+   GEK+SKS G +I    VIE     +  R
Sbjct: 304 LYFHTLFWPATLQFAGYRTPTNVFAHGFLTVDGEKMSKSRGTLISANSVIECGFNPEWFR 363

Query: 327 YFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           Y+   ++    D   D D        RVN+DL     N+ SRS   ++K +DG++     
Sbjct: 364 YYFATKL---NDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFDGVVSDAAM 420

Query: 383 FTESDESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                + I +   ++  L E RE        +AL  ++ L  +V+ + D  KPWE+ K N
Sbjct: 421 SNPLLQEIAAASEKIAGLYEARE------YAKALRTIMDLADKVNAFVDENKPWEIAK-N 473

Query: 441 PDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           P+R +   TV  VT+E  R L + L+  +P++A  + +   +  +N
Sbjct: 474 PEREADLQTVCSVTLEAFRMLTLYLKPVIPQVAAGVEEFFSLEPQN 519


>gi|306824171|ref|ZP_07457542.1| methionine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309801107|ref|ZP_07695237.1| methionine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304552559|gb|EFM40475.1| methionine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308222333|gb|EFO78615.1| methionine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 620

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 255/554 (46%), Gaps = 73/554 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+ +  + G IYKG  
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        G+DG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263
           GI IP     D+P   +YVW DA+  YL+ +         PD  +A +W        + +
Sbjct: 236 GIPIPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRA-WWNDPTTPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  +++
Sbjct: 355 VIYVKDILSRYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP     + T+ D ++L+  +     I   ++N     AL++ + +V ++++Y
Sbjct: 415 NKNF-GEIPALDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             A +PW++K  NP R  TVL+V  + +     LL  F+P  A K+++ L          
Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532

Query: 488 SLDQRL---KPGFM 498
            L++     KPGFM
Sbjct: 533 RLEEVEDLDKPGFM 546


>gi|261343413|ref|ZP_05971058.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568556|gb|EFB74091.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 675

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 234/513 (45%), Gaps = 44/513 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  +   ++  ++      ISYD++  T  + +     +++ K+ + G I     S
Sbjct: 67  GISPEEMIAAMNQEHQNDFAGFQISYDNYHSTHSEENKQLSEMIYGKLKNNGFIKSKTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             Y   ++  +  D   KG      A+ QY       +A ++P + +             
Sbjct: 127 QLYD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL    ++R +  +G +
Sbjct: 186 RETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLHQWDITRDSPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWNKDSKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDNLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K + G +    A  E  +  +
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFSGKLSANLAEPELYQQFV 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
                  Q I +   N+   +A+ ++++L    +RY D + PW + K          +  
Sbjct: 423 DAA----QVIGDAYTNREYGKAVREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + + R L   L+  +P L  +  D L V  E
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTQRAEDFLNVKLE 511


>gi|293396970|ref|ZP_06641244.1| methionine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291420441|gb|EFE93696.1| methionine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 676

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  MGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + ++           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A + +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKL----AASLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFTDAADSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|312199898|ref|YP_004019959.1| methionyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311231234|gb|ADP84089.1| methionyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 580

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 237/522 (45%), Gaps = 64/522 (12%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N  PH+GH A   + AD+ AR+ R+ G  VL  +G+D HG  I   A+  G+
Sbjct: 33  VAVAWPYANGAPHLGHIAGAYLPADIFARYQRMAGRRVLMVSGSDAHGTPITVRAEEEGI 92

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+    F D+ + L IS+D F  T    H    + ++ ++   G I     + +
Sbjct: 93  TPQQVVDRYHPIFLDIWERLGISFDLFTSTRTDNHTAVTQDVFTRLRAAGYISVQETTQF 152

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG------------ 164
           Y  +   +  D  V        Y  A G Q  N     +P Q +E               
Sbjct: 153 YDPQAGRFLPDRYVVGTCPHCAYPSARGDQCENCGRTLDPDQLIEPRSKMTGAVPEQRRT 212

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWGIK 219
             +F  LS  ++ LL++ E+   +     RR   N  + FVK GL D +++R   DWG+ 
Sbjct: 213 SHFFLDLSKLEEPLLAWLETRTGW-----RRHVINWSLQFVKDGLHDRAITRD-LDWGVP 266

Query: 220 IPDD---PQYIMYVWIDALTNYLTTTG---------------YLDNPDGSKAKFWPADLH 261
           +P D   P   +YVW +A+  YL+ +                + +NPD +   F      
Sbjct: 267 LPTDELGPGKRIYVWFEAVIGYLSASKEWAATIAGAPEAWRDWWENPDAAAYYF------ 320

Query: 262 VIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            +GKD + FH + WPA LL    L LP  V ++ ++   G K SKS G      E +E +
Sbjct: 321 -VGKDNIPFHTVIWPAMLLGYGGLDLPTDVPANQYVTFGGAKASKSAGIGRSVPEYLEVL 379

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---I 377
             DALRY L   +    D       + +RVN +L    GNLV+R ++ I K +DG+   +
Sbjct: 380 QPDALRYALATVLPEQNDTEISDGDIIRRVNDELIANWGNLVNRVMAQINKFFDGVLPDV 439

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P+P     S   +L+     L    E ++   +  AL   +    EV++Y   ++PW+  
Sbjct: 440 PSPEELGGSHAELLAKVDEGLARTAELLEKVELRAALRAAMEASGEVNQYLYREEPWKTV 499

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           K + D A+  L  +++ I  +A+ L  F+P    ++ D+L V
Sbjct: 500 KVDRDAAARSLATSIQAIAGIAVALAPFLPFSTERLQDVLGV 541


>gi|262376740|ref|ZP_06069968.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308450|gb|EEY89585.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 686

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 247/547 (45%), Gaps = 71/547 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI----LWKKISDKGDIY 120
           G++ +    +    + RD  D   + +D +  T    H DT R     ++ K  D G+I 
Sbjct: 63  GISPEAQIANVQKEHIRDF-DGFGVHFDHYDST----HSDTNRARASEIYVKNRDAGNIA 117

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME- 161
               +  +   ++  +  D   KG      A+ QY          YNA    NP   +  
Sbjct: 118 VRPVTQLFD-PEKGMFLSDRFIKGTCPKCKAEDQYGDSCEVCGATYNATELLNPHSTLSG 176

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR   
Sbjct: 177 ATPVEKSSDHYFFKLPNFGEYLQKW--TRDEGRLPVSIANKLDEWFENGLNDWDISRDAP 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKD 266
            +G +IPD P    YVW+DA   Y+++   Y+    P+ +   +W  D      H IGKD
Sbjct: 235 YFGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPELNFDDYWKKDSENEVYHFIGKD 294

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     +E +  + LR
Sbjct: 295 IVYFHALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLR 354

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +++   +D   + D   ++VN+DL   + N+ SR    I   +D  + T  A  E
Sbjct: 355 YYFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINTKFDNKLSTICAEPE 414

Query: 386 SDESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +S +   S + Q  E RE         A+ ++++L  + ++Y D +KPW L K +   
Sbjct: 415 LVQSFIDAGSSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQDGQE 468

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQS 488
            +   V  V + + RQLA+ L   +P LA ++ D L              V  E   FQ 
Sbjct: 469 QQVHDVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLQLESFDFASRETILVGHEIALFQP 528

Query: 489 LDQRLKP 495
           L QR+ P
Sbjct: 529 LMQRVDP 535


>gi|260598586|ref|YP_003211157.1| methionyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217763|emb|CBA32193.1| Methionyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 712

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 41  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    +     +++ ++ + G I     
Sbjct: 101 LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 160

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 161 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 219

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 220 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 276

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 277 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTQSFEEYWKKDSATELYHFIGKDIVYF 336

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 337 HSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYA 396

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D +
Sbjct: 397 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPA 452

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 453 LYKTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 512

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P+L  +
Sbjct: 513 CSMGINLFRVLMTYLKPVLPELCAR 537


>gi|193083786|gb|ACF09469.1| methionyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-47-D6]
          Length = 551

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 244/502 (48%), Gaps = 41/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N + HIGH A   + ADV  RF +  G++  +   +D+ G  I   ++ 
Sbjct: 4   KAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPILIQSEK 63

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G T + +V   N R+F D  +  +I +D F +T+   +    + ++KK+   G IY+  
Sbjct: 64  EGKTPEEYVQYWNKRDFEDF-EAFNIKFDFFYKTSSSENRQFVQDVFKKLEQAGHIYENE 122

Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEE---------------- 162
               Y   D+ +  D  V     Y  AD QY +      +  EE                
Sbjct: 123 IVQLYCNTDKKFLPDRYVIGTCPYCKADDQYSDLCEKCGRVPEEIENPHCSICGQAPVKK 182

Query: 163 --EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             + YFF+L  + DK+  Y E +    L  + +  V +++K GL D  ++R    WGI I
Sbjct: 183 KTKHYFFKLKNFSDKISQYLEDNKN--LQKDVKKYVQNWIKEGLIDWDITR-DISWGIPI 239

Query: 221 PDDP--QYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW-PADL-HVIGKDILRFHAIYW 275
           P     + + Y W D    Y+++T  +L++ +    KFW  +D+ H IGKDI+  H ++ 
Sbjct: 240 PTGGANEKVFYGWFDNHLAYISSTIKFLNDNNKDGKKFWNESDIYHFIGKDIVYHHYLFL 299

Query: 276 PAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA  L       LP  + + G +  + +KISKS    I   + +E    D LR++L+   
Sbjct: 300 PAMRLGIEEEYKLPDYIPTRGHLTLQSKKISKSRNWYIGLKDFLEIFPADYLRFYLISIN 359

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D   +D D    ++N++L   +GNLV+R++   +K ++G +P P  F + D+    
Sbjct: 360 PYSQDDLNFDWDEFATKINSELIGNLGNLVNRALGFTIKSFNGAVPGPDEFDDMDKEAKK 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + + ++  +   M+   + RAL +++   +  ++YF  ++PW   K  P   S V +++V
Sbjct: 420 MINELVSHLGVLMEENHLDRALKKILQFSAHFNQYFQHKEPW---KNGPGTNSCV-FLSV 475

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
             +R LAI +  F+PK + KI+
Sbjct: 476 NAVRSLAIAIYPFLPKSSQKIW 497


>gi|322832460|ref|YP_004212487.1| methionyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167661|gb|ADW73360.1| methionyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 676

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIRPEEMIAEMSQEHQKDFAGFGISYDNYHSTHSDENRELSALIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + ++           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E YFF L  +   L ++  S     L  +  N++  + + GL+   +SR    +G 
Sbjct: 185 LRDSEHYFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFEHGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +   D +  +FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDRRSDLNFDEFWKKDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +  +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLNHLDADCLRYYYTA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A T +DE++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGKL----ADTLADETL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +   + I +   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAAESIAQAYDSRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLSER 501


>gi|325105850|ref|YP_004275504.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974698|gb|ADY53682.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 685

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 252/544 (46%), Gaps = 46/544 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   I AD+  R+ RL   DV+F  G+DEHG  IA  A     
Sbjct: 11  ITAALPYANGPKHIGHLAGAYIPADLYVRYLRLKERDVVFVCGSDEHGTAIANQAMKENT 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  +D+      +    L IS+D + RT+E  HH+T +  ++ + +K DI+K   S  
Sbjct: 71  TPRAIIDKYHTLIEECFSKLGISFDIYHRTSEPIHHETAQDFFRVLDNK-DIFKVESSEQ 129

Query: 128 YSLRDEAYYNDDEVYKG-----ADGQYYNAQH-------------NPVQWMEEEGYFFRL 169
           Y   +   +  D   KG      D   Y  Q              NP+  +       ++
Sbjct: 130 YYDEEAHAFLADRYIKGTCPNCGDHNAYGDQCEKCGTSLSPDELINPISTLTGNKPVKKM 189

Query: 170 SAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + +    L+ YE    E+IL   + +       +  S++  GL   +++R   DWGIK+P
Sbjct: 190 TKHWYLPLNEYEGFLKEWILEGHKSDWKTNVYGQCKSWIDGGLHPRAVTRD-LDWGIKVP 248

Query: 222 --DDPQYIMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273
             D    ++YVW DA   Y++ T    +DN    +  +W       +H IGKD + FH I
Sbjct: 249 AQDAEGKVLYVWFDAPIGYISATKQWAIDNNKDWEV-YWKDKETKLVHFIGKDNIVFHCI 307

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--VGVDALRYFLV 330
            +P  L +     LP  V ++ F+  +G+K+S S G  I+  E +E+    +D LRY+L 
Sbjct: 308 VFPVMLKTHGEFILPDNVPANEFMNLEGDKMSTSRGWSIEMHEYLEDFPTRIDELRYYLA 367

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  D  +     + RVN +L   +GN V+R + ++ K + G I + G     D +I
Sbjct: 368 SIAPETSDSEFTWKDYQARVNNELVAILGNFVNRVMILMQKYFAGKIESDGKMELKDAAI 427

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +    +  E+ ++ +     +ALA  + +    ++Y   ++PW+  K  P+ A  VL+ 
Sbjct: 428 SADIKSLYSEVEQSFEAYKFRQALASAMDIARLGNKYLTEKEPWKSYKEGPEEAREVLHN 487

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENR-----CFQSLDQRLKPGFMLHKTFDP 505
            + +I   AI LQ F+P  A K+F++L + DE +      F++  Q  +   +  K  D 
Sbjct: 488 CLHIIAHAAICLQPFLPNTAKKMFNMLNLKDEYKFGEEVVFEAGHQLNQATLLFEKVEDD 547

Query: 506 IFPR 509
           +  +
Sbjct: 548 VIAK 551


>gi|257068912|ref|YP_003155167.1| methionyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559730|gb|ACU85577.1| methionyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 599

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 237/520 (45%), Gaps = 59/520 (11%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   VLSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +   D+N+R   +    L +SYD F RTT + HH   + ++  + D G + +   S
Sbjct: 64  GISARDLADRNNRLIVEDLVALGLSYDLFTRTTTRNHHQVVQDMFVTVRDNGYMIEQTTS 123

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---------PV--------QWM 160
           G  S        D  +          GA G   +   N         PV        +++
Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICSAGGARGDQCDNCGNQLDPTDLIDPVSRINGETPEFV 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E   +F  L A   +L  + +      L    R  VI F ++ L+D+     T   DWGI
Sbjct: 184 ETSHWFLDLPALAAELGRWLDEREATGL---WRPNVIRFSQNILEDIKPRAMTRDIDWGI 240

Query: 219 KIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGKDIL 268
            +P   D P   +YVW DA+  YL+ +       G      ++W  P  L  + +GKD +
Sbjct: 241 PVPGWEDQPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRRWWNDPETLAYYFMGKDNI 300

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WPA +++ N              L LP +V S  F+  +G+K S S G VI   
Sbjct: 301 VFHSQIWPAEMIAQNGQGDKGGEPGRFGELKLPTEVVSSEFLTMEGKKFSSSKGIVIYVR 360

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+E    DALRYF+       +D  +       R N +L  G GNLV+R+ +MI K+  
Sbjct: 361 DVLERYQPDALRYFISAAGPENQDADFTWVDFVSRTNNELVAGWGNLVNRTAAMIAKNV- 419

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP  G F E D ++L         +   ++      A+A+ + LV E + Y    +P+
Sbjct: 420 GEIPEAGEFEEIDTALLDQIREGFTTVGGLIEAHRQRAAIAEAMRLVGEANAYVSRTEPF 479

Query: 435 ELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++K +    R  TVL+V  + +  L  +L  F+P+ AN +
Sbjct: 480 KMKAEEQRPRLLTVLHVLAQAVTDLNTMLAPFLPQSANAV 519


>gi|89097430|ref|ZP_01170319.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
           NRRL B-14911]
 gi|89087726|gb|EAR66838.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
           NRRL B-14911]
          Length = 547

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 254/540 (47%), Gaps = 49/540 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R+ G +VL+ +G+D +G  IA  A++ G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRMKGEEVLYVSGSDCNGTPIAIRAKHEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D+  R+F    + L  +YD + RT    HH T + ++  + + G +       
Sbjct: 63  KSAKEIADRYHRDFAASFEQLGFTYDLYTRTDAPHHHQTVQEVFLSLLENGHLVPRTIEQ 122

Query: 127 WYSLRDEAYYNDDEVYKG--------ADGQYYNAQH-----------------NPVQWME 161
            Y  R    +  D   +G        A G   +A                    P +  E
Sbjct: 123 TYC-RTCVQFLPDRYVEGVCPSCGSQARGDQCDACSAILEPADLLDKSCKICGTPPEMKE 181

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKI 220
            + Y+FRLS +Q +L    E      L  +  + +   ++  GL D + +R   D G+ +
Sbjct: 182 TDHYYFRLSHFQKQLEELSEEARSRHLWRDNSSSLTRRYLTEGLLDRAATRD-LDVGVPV 240

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFHAIY 274
           P +   +  +YVWI+A+  YL+ +       G   ++FW +D+   +V GKD + FH I 
Sbjct: 241 PIEGMEKKKIYVWIEAVIGYLSASREWARQHGKDGSRFWGSDVISYYVHGKDNIPFHTII 300

Query: 275 WPAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           WPA  +   LP  P ++ S  ++  + +K+S S    +   +++E    D++RYFL    
Sbjct: 301 WPAIQMGIGLPGEPARMVSGEYLTLEKKKLSTSRNYAVWVPDILERYEPDSIRYFLAVNA 360

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +         N++L    GNLV+R+   I K YD MIP  G  +E+ +  +  
Sbjct: 361 PENRDADFSWREFVYSHNSELLGAYGNLVNRTFKFIEKYYDSMIPD-GKLSEAVQEDIK- 418

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              + ++  E ++   +  AL  + + V   ++YFD+++PW+  K++P + +  L   V 
Sbjct: 419 --HLYEKTGEKIEGAKLKEALEDIFAFVRSANKYFDSEQPWKTIKSDPQKCADALQTCVY 476

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +I+ LA LL  F+P  + KI ++L V     E +  ++ ++RL        T  P+F R 
Sbjct: 477 IIKNLARLLNPFLPFSSRKINNMLQVNAHTLEWKEVRAAEKRL-------GTIAPLFSRL 529


>gi|330957740|gb|EGH58000.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 682

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 240/547 (43%), Gaps = 51/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D A  L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFAGFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++      +  D    KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKNMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W  D      H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   GM+    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGMMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFML 499
              V  + + + RQL I L+  +P LA      L VA    D+++    ++ +L P   L
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLL-VNHQLNPFSAL 530

Query: 500 HKTFDPI 506
               DP+
Sbjct: 531 MTRIDPL 537


>gi|293390593|ref|ZP_06634927.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951127|gb|EFE01246.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 686

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 241/512 (47%), Gaps = 58/512 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKAD 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+T +  +D   +  + MAD    +IS+D++  T  + + +   +++ ++ + G I  
Sbjct: 65  QMGITPEQLIDDVRQ--KHMADFAGFNISFDNYHSTHSEENRELSELIYSRLKENGFIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              S  Y   ++  +  D   KG             + +   A +NP + +         
Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYNPTELINPRSVVSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    
Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-------TGYLDNPDGSKAKFWPAD-----LHVI 263
           +G +IP+      YVW+DA   Y+ +         Y+D  DG    FW  D      H I
Sbjct: 239 FGFQIPNAEGKYFYVWLDAPIGYMASFKNLCKRESYIDF-DG----FWHKDSDAELYHFI 293

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A+   P  +F HG++   GEK+SKS G  I     ++ +  +
Sbjct: 294 GKDIMYFHSLFWPAMLEGADFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPE 353

Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   D    + +   +RVN DL N + NL SR+V  I K +DG +    A
Sbjct: 354 CLRYYYAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNVGFIQKRFDGKL----A 409

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +  D+++        ++I    +N+   +A+ ++++L  + ++Y D + PW + K    
Sbjct: 410 ASLDDKALFDEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYIDDKAPWVIAKEAGK 469

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
            A    V  + +++ R L   L+  +PKLA +
Sbjct: 470 DAELQAVCSMGIQLFRVLMGYLKPVLPKLAER 501


>gi|304414294|ref|ZP_07395662.1| Methionyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283508|gb|EFL91904.1| Methionyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 557

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 232/507 (45%), Gaps = 44/507 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   
Sbjct: 3   KMAKKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVYFICADDAHGTPIMLK 62

Query: 62  AQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AQ  G+   ++  + N  + +D A    ISYD++  +  + + +  ++++ ++ +KG I 
Sbjct: 63  AQQLGLKPEQMIAEMNQEHQQDFAG-FSISYDNYHSSHSEENLELSKLIYCRLKEKGYIK 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160
           K   S  Y    E + +D  V             G + +   A ++P++ M         
Sbjct: 122 KRIISQLYDPEKEMFLSDRFVKGSCPKCQSPDQYGDNCEACGATYSPIELMDPKSTLSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L A+ D L S+  S     L  +  N++  +  SGL+   ++R    
Sbjct: 182 VPLIRESEHFFFDLPAFSDMLQSWIHSG---TLQEQVANKMQEWFTSGLQQWDITRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFW----PADL-HVIGKDIL 268
           +G +IPD P    YVW+DA   Y++    L     D     FW      DL H  GKDI+
Sbjct: 239 FGFEIPDAPGKYFYVWLDAPIGYMSAFKNLCSKRSDLDFNAFWCEGATTDLYHFTGKDIV 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  +F HG++   G K+SKS G  I     +     D LRY+
Sbjct: 299 YFHSLFWPAMLDGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLNYFDPDCLRYY 358

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    +     +RVN D+ N + NL +R+ S I K + G +    A   +D
Sbjct: 359 YAAKLSSRIDDIDLNLADFVQRVNTDVVNKLVNLAARNASFINKKFAGKL----AHQLAD 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
            ++    +     I +   N+   +A+ ++++L    +RY D Q PW + K  +      
Sbjct: 415 AALYKTFTDAAVTIAQAYDNRESGKAIREIMALADLANRYVDEQAPWVVAKDASRTTDLQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  + + + R L I L+  +P L+ +
Sbjct: 475 MICSMGINLFRVLMIYLKPVMPSLSTR 501


>gi|326772382|ref|ZP_08231667.1| methionine--tRNA ligase [Actinomyces viscosus C505]
 gi|326638515|gb|EGE39416.1| methionine--tRNA ligase [Actinomyces viscosus C505]
          Length = 615

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 238/528 (45%), Gaps = 63/528 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +   
Sbjct: 63  EGLSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +         +GA G   +   N +                 ++
Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLISPRSRINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E   +F  L A    L ++ +   E       R  VI F ++ L D+     T   DWG
Sbjct: 183 VETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLGDIRPRAMTRDIDWG 239

Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266
           I +P   D P   +YVW DA+  YL+ +        +P+  +A +W  P  L  + +GKD
Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGKD 298

Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI 
Sbjct: 299 NIVFHSQIWPAELLGYNGQGAAGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIY 358

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K 
Sbjct: 359 VRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G IP P    + D ++L         + + +       AL + + LV E ++Y    +
Sbjct: 419 F-GQIPEPAELQDIDRTLLDAVEAGFASVGDLIAQHRQKAALGEAMRLVGEANKYVADTQ 477

Query: 433 PWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P++LK  +P    R +TVL+   + +  L ++L  F+P  AN +  +L
Sbjct: 478 PFKLKGEDPATQARLATVLHTLAQAVTDLNLMLSPFLPHAANDVDRVL 525


>gi|291303161|ref|YP_003514439.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572381|gb|ADD45346.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 597

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 239/526 (45%), Gaps = 64/526 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  A+A+P  N   HIGH     + AD+ AR+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 3   HVLAALAWPYANGPRHIGHVAGFGVPADIFARYMRMAGHDVLMVSGTDEHGTPILVQADQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G       ++ +R   +  + L +SYD F RTT   H+   + +++ +   G I +   
Sbjct: 63  EGAKPAELANRYNRVIVEDLNALGMSYDLFTRTTTANHYQVVQEMFRTVHANGYIVEKTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QW 159
            G  S        D  +        Y  A G Q  N   Q +P+              ++
Sbjct: 123 KGAISPSTGRTLPDRYIEGTCPICGYDNARGDQCDNCGNQLDPIDLINPKSRINGEVPKF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + +F  L A  D L  + ++  ++      R  V+ F  + + D+     T   DWG
Sbjct: 183 IETQHFFLDLPALADALGEWLKTRSDW------RPNVLKFAMNLVDDMRPRAITRDLDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PADL--HVIGK 265
           + +P     D+P   +YVW DA+  Y + +       G      K+W  P  L  + +GK
Sbjct: 237 VPVPLEGWQDNPTKRLYVWFDAVIGYFSASVEWARRSGDPEAWRKWWNDPEALSYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FHA  WPA LL+ N              L LP +V S  ++  +G+K S S   VI
Sbjct: 297 DNITFHAQIWPAELLAHNGKGSKGGEPGVYGELNLPTEVVSSEYLTMEGKKFSSSRKVVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +E  G DALRYF+        D  +      +R N +L  G GNLV+RS++M  K
Sbjct: 357 YVRDFLERYGPDALRYFIAAAGPENNDTDFTWAEFVRRNNDELVAGWGNLVNRSIAMAAK 416

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++ G IP  G   + D  +L+  +     +  ++ +  +   + + +  V+ V++Y    
Sbjct: 417 NF-GQIPEAGELEDIDRELLATVTAAFDTVGGHLASNKVKAGIGEAMRTVAAVNKYLADT 475

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            PW+LK+  P R +TVL+V ++ +     LL  F+P  + K+ ++L
Sbjct: 476 APWKLKEDKP-RMATVLHVALQAVNDCKTLLAPFLPFSSQKVNELL 520


>gi|307130139|ref|YP_003882155.1| methionyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306527668|gb|ADM97598.1| methionyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 677

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 231/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     S
Sbjct: 67  GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161
             +   +++ +  D   KG      A  QY        A ++P + +E            
Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSAVSGATPVM 185

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ D L S+  S     L  +  N++  +  +GL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQSWTRSG---ALQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G  S  +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLSFDEFWRKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLKHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----AGQLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                  Q I +   ++   +A+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 QTFIDAAQTIADAYGSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L  +
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTER 501


>gi|270346536|pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
           Modified Specificity
 gi|270346537|pdb|3H99|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
           Modified Specificity Complexed With Methionine
 gi|270346538|pdb|3H9B|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
           Modified Specificity Complexed With Azidonorleucine
          Length = 560

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 230/505 (45%), Gaps = 45/505 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A  Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 18  KKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 77

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 78  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 137

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 138 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 196

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 197 MRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 253

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA    + +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 254 EIPNAPGKYFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 313

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+  
Sbjct: 314 LSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYT 373

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++ +  A    D  
Sbjct: 374 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELA----DPQ 429

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    +
Sbjct: 430 LYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 489

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKL  +
Sbjct: 490 CSMGINLFRVLMTYLKPVLPKLTER 514


>gi|172040240|ref|YP_001799954.1| methionyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|229470714|sp|B1VFI1|SYM_CORU7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|171851544|emb|CAQ04520.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 611

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 246/531 (46%), Gaps = 67/531 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A 
Sbjct: 3   KRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMIGNDVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   D+ +R   +    L +SYD F RTT + H+   + L++ +++ G + K  
Sbjct: 63  KENTTVRELADRYNRIIVEDLVGLGLSYDLFTRTTTRNHYAIVQELFRGLNENGYMLKQT 122

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------Q 158
             G  S        D  +            +G        Q +P               +
Sbjct: 123 TRGAVSPSTGRTLPDRYIEGTCPLCGATDARGDQCDNCGNQLDPADLIDPRSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           +++ E +   L A  + L  + +   ++      R  V+ F  + LKD+   ++SR   D
Sbjct: 183 FVDTEHFMLDLPALAEALEEWLKGRNDW------RPNVLKFSLNLLKDIRPRAMSRD-ID 235

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WG+ +P     D+    +YVW DA+  YL+ +        +P+  + K+W        + 
Sbjct: 236 WGVPVPIEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWR-KWWNDPEAVSYYF 294

Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FH+  WP  +L                 L LP +V S  F+   G K S S G
Sbjct: 295 MGKDNITFHSQIWPGEMLGYAGKGSKGGEQGELGELNLPTEVVSSEFLTMSGSKFSSSKG 354

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + ++E G DALRYF+        D  +  D   +R+N++LAN  GNLV+R+ SM
Sbjct: 355 VVIYVRDFLKEFGPDALRYFIAVAGPENTDTDFTWDEFVRRINSELANEWGNLVNRTASM 414

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K++ G IP PG FT  D+++L    +    + + +Q       + + + + +  ++Y 
Sbjct: 415 AHKNF-GEIPQPGEFTAEDQALLDEAKQAYTVVGDALQLSKFKAGMTEAMRIAARANQYI 473

Query: 429 DAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            AQ+PW+L K  T  +R +TVLYV ++V+  +  L+  ++P  A K+F+ L
Sbjct: 474 AAQEPWKLAKDETQRERLATVLYVALQVVSDVNTLMTPYLPFSAQKVFETL 524


>gi|118576573|ref|YP_876316.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195094|gb|ABK78012.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 548

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 255/538 (47%), Gaps = 46/538 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R++  I++A+ Y N + H+GH A   + ADV  RF RL G++  +   +D++G  I   +
Sbjct: 2   RDRAIITSALPYANGEIHLGHIASTYLPADVTTRFLRLKGVEAYYICASDDYGTPILIQS 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G T + +V+  +R  R+  + L IS+D F RT+   + +  + ++  +++ G IY+ 
Sbjct: 62  EKEGKTPEEYVEHWNRRDREDFEALGISFDFFSRTSSPANTEFVQHVFTVLNEGGHIYED 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQYYN-------------------AQHNPVQ 158
               +Y   D  +  D  V     +  A  QY +                     + PV+
Sbjct: 122 EVVQFYCENDSKFLPDRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVK 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 YFFRL  +  +L  + E +    L  + +  V +++KSGL D  ++R    WG+
Sbjct: 182 -RSSRHYFFRLGGFSGRLSEWLEGNTN--LQEDVKKYVQNWIKSGLSDWDITRD-IPWGV 237

Query: 219 KIPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSKAK-FW-PADL-HVIGKDILRFHAI 273
            IP D     + Y W D    Y++         G  AK FW  AD+ H IGKDI+  H +
Sbjct: 238 PIPLDGAAGKVFYGWFDNHLAYISAASEFLGKRGIDAKEFWNSADIYHFIGKDIVYHHYL 297

Query: 274 YWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + PA  L +    LP  + + G +  + +KISKS    I   E + E   D LR++L   
Sbjct: 298 FLPAIRLGTGEYKLPDYIPTRGHLTLESKKISKSRNWYIGLREFLGEYPADYLRFYLAYI 357

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               +D   +D      R+N++L   +GN V+R++    K +DGM+P P    ++D+   
Sbjct: 358 NPYAQDDLNFDWGDFAARINSELIGNVGNFVNRALGFAAKRFDGMVPEPDTVGKTDKEAE 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +  + + +E+        I RAL +++   +  ++YF   +PW   K  P  A+T +Y++
Sbjct: 418 ARITVLSEELGXXXXXXXIDRALKRILEFSAHFNQYFQHAEPW---KGGPG-AATCVYMS 473

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFV---ADENRCFQSLDQRLKPGFMLHKTFDPI 506
              +R +A+ L  F+P+ A +I+  L +   A E +        ++PG   H+  DP+
Sbjct: 474 ANAVRSMAVALCPFLPESAERIWGQLGLEGRASEEQWDSISAVAIRPG---HRLGDPV 528


>gi|161528471|ref|YP_001582297.1| methionyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339772|gb|ABX12859.1| methionyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 551

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 240/507 (47%), Gaps = 41/507 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K  I++A+ Y N + H+GH A   + ADV  RF + +G++  +   +D+ G  I   +
Sbjct: 2   NKKAIITSALPYANGEIHLGHVASTYLPADVTTRFLKQNGVEAYYVCASDDFGTPILIQS 61

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  G T   +V   N R++ D +   DI +D F +T+   +    + ++KK++D G IY+
Sbjct: 62  EKEGKTPAEYVAHWNKRDYEDFS-AFDIDFDYFYKTSSDENIQFVQDVFKKLNDAGHIYE 120

Query: 122 GCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEE-------------- 162
                +Y   D+ +  D  V     Y  A+ QY +   +  +  EE              
Sbjct: 121 QEIIQFYCNNDKKFLPDRYVKGTCPYCKAEDQYSDLCESCGRVPEEITNPKCSLCGQPPT 180

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 YFF+L  + + L  + + +    L  + +  V +++KSGL D  ++R    WG+
Sbjct: 181 KEKTTHYFFKLKNFGEPLSKWLDENDH--LQKDVKKYVQNWIKSGLIDWDITRD-ITWGV 237

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW-PADL-HVIGKDILRFHAI 273
            +P  D    + Y W D    Y++T     N  G   K FW  AD+ H IGKDI+  H +
Sbjct: 238 PVPLDDAKDKVFYGWFDNHLAYISTALKFLNDKGIDGKEFWNSADIYHFIGKDIVYHHYL 297

Query: 274 YWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + PA  L   +   LP  + + G +  + +KISKS    I   E +E    D LR++LV 
Sbjct: 298 FLPAMRLGIESEYKLPDYIPTRGHLTLQAKKISKSRNWYIGLKEFLEYYPADYLRFYLVS 357

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                +D   +D D    R+N++L   +GN ++R++    K +DG IP P  F E D   
Sbjct: 358 INPYSQDDLNFDWDDFTTRINSELIGNLGNFINRALGFTKKAFDGNIPDPEDFDEKDSEA 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 +  E+   M+   + RAL +++   S  ++YF  ++PW   K  P  AS V Y+
Sbjct: 418 EQKIKSLASEVGSLMEQNHLDRALKKIMEFSSYFNQYFQHKEPW---KKGPGTASCV-YL 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           +V  +R LAI    F+PK A  I+  L
Sbjct: 474 SVNAVRSLAIATFPFIPKSAQNIWTQL 500


>gi|330859356|emb|CBX69702.1| methionyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 675

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 226/503 (44%), Gaps = 42/503 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  LGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
           S  Y      +  D  V             G + +   A ++P + +             
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFHA 272
           IPD P    YVW+DA   Y+     L +  G     +FW     ADL H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 KTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L  +
Sbjct: 479 MGINLFRVLMTYLKPVLPALTER 501


>gi|123443000|ref|YP_001006975.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|187653900|sp|A1JTX6|SYM_YERE8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122089961|emb|CAL12818.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 675

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  LGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFH 271
           +IPD P    YVW+DA   Y+     L +  G     +FW     ADL H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPALTER 501


>gi|289641468|ref|ZP_06473631.1| methionyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508678|gb|EFD29614.1| methionyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 575

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 241/521 (46%), Gaps = 49/521 (9%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +ER + + ++ A  Y N  PH+GH A   + AD+ AR+ RL G  VL  +G+D HG  I 
Sbjct: 31  RERGRPVLVAVAWPYANGMPHLGHIAGAYLPADIFARYQRLAGNQVLMVSGSDTHGTPIT 90

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GV+    V++    F  + D + IS+D F  T    H +  + ++ ++ + G I
Sbjct: 91  VRADIDGVSPAEIVNRYHPEFLRIWDDIGISFDLFTSTMTDNHREVAQDVFVRLREAGYI 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG---- 164
                  ++  +   +  D  V        Y  A G Q  N     +P   ++       
Sbjct: 151 VPEETVQFFDPQAGRFLPDRYVVGTCPFCAYGEARGDQCENCGRTLDPDILLDPRSKLTG 210

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSR 211
                     +F RLSA  D LL++ E+   +     RR   N  + FVK GL D +++R
Sbjct: 211 AVPEKRATTHFFLRLSALADDLLAWLETRTGW-----RRHVMNWSLQFVKDGLHDRAITR 265

Query: 212 KTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADL 260
              DWG+ +P D   P   +YVW +A+  YL+ +        +PD  + ++W     A  
Sbjct: 266 D-LDWGVPLPTDELGPGKRIYVWFEAVIGYLSASKEWAARSGDPDAWR-QWWQNPDAASY 323

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + +GKD + FH + WPA L+    L LP  V ++ ++   G K SKS G      E ++ 
Sbjct: 324 YFVGKDNIPFHTVIWPAMLIGYGGLELPTDVPANQYVTFGGAKASKSAGIGRGVREYLDR 383

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  DALRY L   +    D       + +R+N +L    GNLV+R ++ I K +DG +P 
Sbjct: 384 LQPDALRYALATVLPEQNDTEITDADIIRRINDELIANWGNLVNRVMAQIGKRFDGRVPE 443

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G    +   ++      L  + E +    +  AL   + + +EV+ Y   ++PW+  KT
Sbjct: 444 AGELDGAHAKLIDSVDAGLVRVGELIGRVELRAALRAAMEISAEVNAYLYREEPWKTVKT 503

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +P RA   L V+++ I  +   L  F+P  + ++ D L ++
Sbjct: 504 DPARAGRTLAVSIQAISGITTALAPFLPFTSARLADTLGIS 544


>gi|121603729|ref|YP_981058.1| methionyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|187647741|sp|A1VKF9|SYM_POLNA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120592698|gb|ABM36137.1| methionyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 707

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 245/535 (45%), Gaps = 62/535 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R +L+++TA+ Y N   HIGH  E I AD+  R+ R+ G  V F    D HG  I  
Sbjct: 1   MSQR-RLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMQGNAVNFVGADDAHGAPIMI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD--KGD 118
           AA+ AG T + FV   +   +   D   IS+D++  T    +H+  R +++ + D  +G 
Sbjct: 60  AAEKAGKTPQQFVADIASGRKPYLDGFHISFDNWSSTDSPENHELARQIYRDLRDNPQGS 119

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------ 160
           + +      +   ++  +  D   KG      A  QY        A + P   +      
Sbjct: 120 LIETKTIEQFFDPEKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAVYAPTDLINPYSAL 179

Query: 161 --------EEEGYFFRLSAYQDKLLSYYES-------HPEFILPIER----RNEVISFVK 201
                     E +FF+LS    + + + ES        PE    ++     R        
Sbjct: 180 SGVTPVLKSSEHFFFKLS--DARCVEFLESWTQDGKLQPEVANKVKEWFSVRENADGTQS 237

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-- 259
            GL D  +SR    +GI+IPD P    YVW+DA   YL +   L +  G     + AD  
Sbjct: 238 EGLGDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDRRGESYDDYMADPK 297

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIE 315
               H IGKDI+ FH ++WPA L  +    P  +F HGF+ ++ GEK+SKS G  +DP++
Sbjct: 298 LEQYHFIGKDIVTFHTLFWPAMLHFSGRKTPDNIFVHGFLTVNNGEKMSKSRGTGLDPLK 357

Query: 316 VIEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
            +  +G++   LRY+L  ++ A  +D  ++ D    RVN+DL     N+ SR+   + K 
Sbjct: 358 YL-SLGMNPEWLRYYLAAKLNARNEDIDFNADDFMARVNSDLVGKFINIASRAAGFLTKR 416

Query: 373 YDGMIP-TPGAFTESDES-----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +DG I    G F   D        +S       EI E  + + + +A+ +++ +   ++ 
Sbjct: 417 FDGKIGDASGDFPNPDGQGYPSLAISEIGACAAEISELYEQRELGKAMRKIMEIADGLNS 476

Query: 427 YFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +DA +PW+L K+       R   +   T+E  R L + L+  +P LA ++   L
Sbjct: 477 DWDAAQPWKLAKSEEPQQLARLQRICSNTIEGFRLLTLYLKPVLPALAIEVESFL 531


>gi|89889849|ref|ZP_01201360.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7]
 gi|89518122|gb|EAS20778.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7]
          Length = 690

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 235/515 (45%), Gaps = 39/515 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +++  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DV F  G+DEHG  I 
Sbjct: 1   MSSQQRYTITAALPYTNGPVHIGHLAGVYVPADIFARYQRMRGSDVAFICGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+  R   D      I++D + RT+   HH T    + K+ + G  
Sbjct: 61  IKAKKEGITPQELVDRYHRIIGDSFKEFGITFDHYGRTSSTEHHKTASAFFTKLYNDGKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQ-------HNPV----------- 157
            +      Y    + +  D  V     K  + + Y  Q       HN             
Sbjct: 121 IEQVTEQLYDPEADQFLADRFVVGTCPKCGNTESYGDQCEKCGTSHNATDLIDPKSAITG 180

Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              +  E + +F  L  Y D L  +               +V S++  GL   +++R   
Sbjct: 181 NIPELKETKHWFLPLDEYSDWLNEWIVEGHSKDWKANVLGQVKSWITDGLHPRAVTRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T      +G   + +W  D    LH IGKD 
Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKKDDTKLLHFIGKDN 299

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  +P  V ++ F+  + +KIS S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPAMLKAHGDYVMPDNVPANEFLNLEDDKISTSRNWAVWLHEYLEDFPGQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R + +  K Y+G++P      
Sbjct: 360 LRYVLTANAPETKDNNFTWKDFQARNNNELVANLGNFVNRVIVLTNKYYEGIVPETANLA 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF--DAQKPWELKKTNPD 442
           + D  +L       + I +++       AL ++++L S  ++Y   +  +PW+L KTNP+
Sbjct: 420 QRDLDVLEQIKAFPKTIGDSLDRYRFREALQELMNLSSIGNKYIAEEGLEPWKLAKTNPE 479

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   ++YV +++   LAIL + F+P  ++K+  +L
Sbjct: 480 QVQNIMYVCLQLTTALAILSEPFLPHTSSKLKSML 514


>gi|254492552|ref|ZP_05105724.1| methionyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462444|gb|EEF78721.1| methionyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 678

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 235/512 (45%), Gaps = 59/512 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF R+ G +  +    D HG  I   AQ
Sbjct: 2   QRKILVTSALPYANGSIHLGHMVEYIQTDIWVRFQRMRGHECHYVCADDAHGTPIMLRAQ 61

Query: 64  NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI----SDKGD 118
             G+T +  + D ++ +  D A+   IS+D++  T    H D  R L  +I     D G 
Sbjct: 62  KEGITPEQLISDVSTEHQADFAE-FAISFDNYHST----HSDENRALASQIYLANRDAGH 116

Query: 119 IYKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM------- 160
           I     S  Y    E +  D     E  K GA  QY        A ++P +         
Sbjct: 117 IETRTISQAYDPEKEMFLPDRFIRGECPKCGAADQYGDNCEACGATYDPTELKNPVSAVS 176

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E E YFF+L  ++  L  +  +H + + P E   ++  + +SGL+D  +SR  
Sbjct: 177 GATPITKESEHYFFKLGDFEKTLQEW--THSDHLQP-EVTRKLSEWFESGLQDWDISRDA 233

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPD---------GSKAKFWPADLHVI 263
             +G +IPD      YVW+DA   YL +   Y D            GS  +     +H I
Sbjct: 234 PYFGFQIPDTDNKFFYVWMDAPIGYLASFKNYCDRSGIDFDSFMKPGSDTEM----VHFI 289

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FHA++WPA L  A    P  V++HGF+   G+K+SKS G  I     ++ +  +
Sbjct: 290 GKDIIYFHALFWPAMLEGAGFRQPDNVYAHGFLTVDGKKMSKSRGTFIKARTYLDHLNPE 349

Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++  G D      +  + R+N+DL   + N+ SR    + K +DG + +   
Sbjct: 350 YLRYYFAAKLGSGIDDIDLSLEDFQTRINSDLVGKVVNIASRCAGFLTKRFDGKLGS--- 406

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
              S+ S+ +   +  + I +  +++   +A+ ++++L    ++Y D  KPW L K +  
Sbjct: 407 -ELSEPSLFNDFIKQAENIAKRYEDREFGQAMREIMALADRANQYIDEMKPWVLAKEDGK 465

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
            A    +  + + + R L   L+  +PK A +
Sbjct: 466 EAEVQAICTMGINLFRVLIAYLKPVLPKTAEQ 497


>gi|251790453|ref|YP_003005174.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539074|gb|ACT07695.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 677

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 229/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     S
Sbjct: 67  GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             +   +++ +  D   KG      A  QY        A ++P + +             
Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L  +  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQGWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLKHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----ADQLADAALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                  Q I E   ++   +A+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 QTFIDAAQTIAEAYGSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L  +
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTER 501


>gi|121595776|ref|YP_987672.1| methionyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|187645702|sp|A1WBH1|SYM_ACISJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120607856|gb|ABM43596.1| methionyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 688

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 240/541 (44%), Gaps = 54/541 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K++++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 5   KIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSPENHELSQQIYLDLKAAGFIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
            ++   ++  +  D   KG      A  QY +               NP   +       
Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPYSALSGAKPVL 183

Query: 162 --EEGYFFRLSAYQD-KLLSYYESHPEFILP---------IERRNEVISFVKSGLKDLSL 209
              E +FF+LS  +  + L+ +  + + + P            R         GL D  +
Sbjct: 184 KTSEHFFFKLSDPRAVEFLTEWTQNGQHVQPEVAAKIKEWFGTRTNPDGTTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLNKRGEDYDAYMADPQLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVD 323
           KDI+ FH ++WPA L  +    P K+  HGF+ ++ GEK+SKS G  +DP++ +  +G++
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYL-ALGMN 362

Query: 324 A--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
              LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   I K + G +   
Sbjct: 363 PEWLRYYLGAKLNGKNEDIDFNPEDFMARVNSDLIGKYVNIASRAAGFIFKRFGGKL--- 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  +   +++L+        I    + +   RA+ + + L   V+ Y DA KPWEL K  
Sbjct: 420 GEVSADGQALLAQLREQAGPIVAAYEARDTARAVRETMLLCDRVNSYVDANKPWELAKQE 479

Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
               R   V    +E  R L I L+  +P++A ++   L V  E   F  + Q L  G  
Sbjct: 480 GMEARLQDVCTTCIEAFRILTIYLKPILPQVAAEVARFLIVPPEQ--FAEVAQPLGAGHQ 537

Query: 499 L 499
           +
Sbjct: 538 I 538


>gi|52425686|ref|YP_088823.1| methionyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|68565974|sp|Q65S22|SYM_MANSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52307738|gb|AAU38238.1| MetG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 686

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 240/508 (47%), Gaps = 49/508 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A
Sbjct: 4   QHRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKA 63

Query: 63  QNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              G+T  ++  D   +++ D     +IS+D++  T  + + +   +++ ++ + G I  
Sbjct: 64  DQMGITPEQLIADVKEKHYADFCG-FNISFDNYHSTHSEENRELSELIYSRLKENGFIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160
              S  +   +++ +  D   KG      A+ QY       +A ++P + +         
Sbjct: 123 RTISQLFD-PEKSMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSAVSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L +++  L  +  S     L  E  N++  +  +GL+   +SR    
Sbjct: 182 TPVIKESEHFFFDLPSFESMLKEWNRSGA---LQSEVANKMQEWFDAGLQQWDISRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD-----LHVIGKDI 267
           +G KIP       YVW+DA   Y+ +   L   +N D  +  FW  D      H IGKDI
Sbjct: 239 FGFKIPGTENKYFYVWLDAPIGYMASFKNLCKRENLDFDR--FWNKDSNTELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  AN   P  +F HG++   GEK+SKS G  I     ++ +  + LRY
Sbjct: 297 MYFHSLFWPAMLDGANYRKPTNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++    D   + D   +RVN DL N + NL SR+   I K +DG +    A    
Sbjct: 357 YYAAKLSNRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----ADKLE 412

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444
           DES+ +      ++I    +N+   +A+ ++++L  + ++Y D + PW + K     A  
Sbjct: 413 DESLFAEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYVDDKAPWVIAKEEGREAEL 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  + +++ R L   L+  +PKLA +
Sbjct: 473 QAVCSMGIQLFRVLMGYLKPVLPKLAER 500


>gi|154150363|ref|YP_001403981.1| methionyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|187647736|sp|A7I6H7|SYM_METB6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|153998915|gb|ABS55338.1| methionyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 662

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 234/509 (45%), Gaps = 40/509 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  L ++  + Y N   H+GH    + AD   R+ R  G +V+F +G+D HG  I  +A+
Sbjct: 3   KPPLLVTCGLPYTNGPCHLGHLRTYVPADCYVRYMRRTGEEVVFVSGSDNHGTPIVVSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   +Q  R+F +    + +S+D F  T +   H   + + +++ D G +YK  
Sbjct: 63  EQGTTPRALSEQYHRHFDETFRRMGVSFDHFGMTDDPACHHRTQDIVQRLVDNGYVYKQV 122

Query: 124 YSGWYSLRDEAYYND----------------DEVYKGADGQYYNAQ-HNPV--------Q 158
            +  Y  + + +  D                DE  +G        +  +PV        +
Sbjct: 123 VNQAYCPKCKRFLPDRYVEGICPYCGKQARGDECDQGCGKHLEPGEIKDPVCKICGTKAE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +  +E YF +LSA++D LL + ++          RN  I ++K  L D  ++R T +WG+
Sbjct: 183 FRNQEHYFLKLSAFRDYLLPFLDN---LKGTSNARNYAIGWIKDELHDWCITR-TLEWGV 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIY 274
           K P     ++YVW+DA   Y+  T      +G   K +W  D    H IG DI+  H I+
Sbjct: 239 KFPGRDDLVVYVWVDAPIGYIAFTEEWAKENGRDWKRYWCKDNRVTHFIGGDIIYHHCIF 298

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVRE 332
           WP  L  A    P  V + G +     K SKS G V+   +   + G+  D LRY+L+  
Sbjct: 299 WPGLLKGAGYGEPYAVVASGMVKVDDHKFSKSRGYVVWTNDDYLDKGLPADCLRYYLLAY 358

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +  K+  +      +R+N ++ N +GN + R++    K++ G+   PG     D +IL+
Sbjct: 359 TSHTKELNFSWKVFGERINNEVVNILGNFLYRTLFFAHKEFGGV---PGG--SVDPAILA 413

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              +  + + + MQ      A+  V+ L +  + Y     PW+L KT+   A+ V+   +
Sbjct: 414 EIEKCQKSVDDQMQAYEFKGAVDTVMGLAAFGNTYIQTNAPWKLIKTDRAAAAQVIKNGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++ + L +L++  +P  A + +  L   D
Sbjct: 474 QIAKALCLLIEPVMPVKAQECWAQLGYID 502


>gi|212716519|ref|ZP_03324647.1| hypothetical protein BIFCAT_01445 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660506|gb|EEB21081.1| hypothetical protein BIFCAT_01445 [Bifidobacterium catenulatum DSM
           16992]
          Length = 620

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 253/554 (45%), Gaps = 73/554 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+    G IYKG  
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELLNPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263
           GI +P     D+P   +YVW DA+  YL+ +        +P+  +A +W        + +
Sbjct: 236 GIPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPETPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L  N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  +++
Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP       T+ D ++LS        +   ++N     AL++ + +V ++++Y
Sbjct: 415 NKNF-GEIPALDENEMTDEDRALLSETKAAFNTVGSLIENHRQKNALSEAMRVVGDINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             A +PW++K  NP R  TVL+V  + +     LL  F+P  A K+++ L          
Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532

Query: 488 SLDQRL---KPGFM 498
            L++     KPGFM
Sbjct: 533 RLEEVEDLDKPGFM 546


>gi|222111976|ref|YP_002554240.1| methionyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782860|sp|B9MEX0|SYM_DIAST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221731420|gb|ACM34240.1| methionyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 688

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 240/541 (44%), Gaps = 54/541 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K++++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 5   KIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSPENHELSQQIYLDLKAAGFIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
            ++   ++  +  D   KG      A  QY +               NP   +       
Sbjct: 125 QFFD-PEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPYSALSGAKPVL 183

Query: 162 --EEGYFFRLSAYQD-KLLSYYESHPEFILP---------IERRNEVISFVKSGLKDLSL 209
              E +FF+LS  +  + L+ +  + + + P            R         GL D  +
Sbjct: 184 KTSEHFFFKLSDPRAVEFLTEWTQNGQHVQPEVAAKIKEWFGTRTNPDGTTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLNKRGEDYDAYMADPQLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVD 323
           KDI+ FH ++WPA L  +    P K+  HGF+ ++ GEK+SKS G  +DP++ +  +G++
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYL-ALGMN 362

Query: 324 A--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
              LRY+L  ++    +D  ++ +    RVN+DL     N+ SR+   I K + G +   
Sbjct: 363 PEWLRYYLGAKLNGKNEDIDFNPEDFMARVNSDLIGKYVNIASRAAGFIFKRFGGKL--- 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  +   +++L+        I    + +   RA+ + + L   V+ Y DA KPWEL K  
Sbjct: 420 GEVSADGQALLAQLREQAGPIVAAYEARDTARAVRETMLLCDRVNSYVDANKPWELAKQE 479

Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
               R   V    +E  R L I L+  +P++A ++   L V  E   F  + Q L  G  
Sbjct: 480 GMEARLQDVCTTCIEAFRILTIYLKPILPQVAAEVARFLIVPPEQ--FAEVAQPLGAGHQ 537

Query: 499 L 499
           +
Sbjct: 538 I 538


>gi|311747941|ref|ZP_07721726.1| methionine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126574911|gb|EAZ79269.1| methionine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 686

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 250/535 (46%), Gaps = 51/535 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   HIGH A   + +D+  R+ R  G DVL+  G+DEHG  I   A+  G 
Sbjct: 11  ITSALPYANGPLHIGHLAGCYVPSDIYVRYLRSLGKDVLYVCGSDEHGVAITIKAKKEGK 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VDQ     +       IS+D + RT+ K HH+T +  +K + DKG+  +     +
Sbjct: 71  TPQQVVDQYHEIMKGSFQEFGISFDHYSRTSAKIHHETAQGFFKDLYDKGEFLEQSTEQY 130

Query: 128 YSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------------EE 162
           +      +  D           +E   G   +   +  +P   +              E 
Sbjct: 131 FDEEAGQFLADRYIEGTCPKCGNENAYGDQCEKCGSSLSPTDLIKPKSKLSGRTPVLKET 190

Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKS------GLKDLSLSRKTFD 215
           + +F  L+ YQ  L  +  E H +     + +N V+   +S      GL+  S++R   D
Sbjct: 191 KHWFLDLARYQSFLKKWIIEDHAD-----DWKNNVLGQCRSWLEAGDGLQARSMTRD-LD 244

Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDIL 268
           WGIK+P  D    ++YVW DA   Y+++T      +G   + +W  +    +H IGKD +
Sbjct: 245 WGIKVPLNDAEGKVLYVWFDAPIGYISSTKEWAAENGKDWEPYWKDEDTKLVHFIGKDNI 304

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +PA L +     LP  V ++ F+  +GEKIS S    +   E +EE     D L
Sbjct: 305 VFHCIIFPAILKTHGGYVLPDNVPANEFLNLEGEKISTSRNWAVWLHEYLEEFPGKQDVL 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N++L    GN V+R+V +  K ++ +IP  G  T 
Sbjct: 365 RYVLTANAPETKDNDFTWKDFQGRNNSELVAIYGNFVNRAVVLTKKYFNDVIPERGELTG 424

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            DE +L   +   ++I  +++      AL  V+ L    ++Y    +PW++ KT+  R  
Sbjct: 425 YDEEVLEALAGFPEKIASSIERYRFREALGIVMDLARLGNKYLADTEPWKVIKTDEARTG 484

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-KPGFML 499
           T+L + + +   LAI+ + F+P  ANK+ + LF  DE +  +S    L K G +L
Sbjct: 485 TILNIALNIAANLAIVSEPFLPFTANKLKE-LFGMDEFKWEESGQPELVKAGTVL 538


>gi|294635538|ref|ZP_06714018.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091107|gb|EFE23668.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 682

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 228/504 (45%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 12  KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  +   SR  + D AD   ISYD++  T  + +     +++ ++ + G I     
Sbjct: 72  GIAPEQMIADVSREHQHDFAD-FQISYDNYHSTHSEENRQLASLIYTRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPI 189

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+   L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 190 LRESEHFFFDLPAFGAMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G  S   +W  +      H IGKDI+ FH
Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLSFDAYWSKESDAELYHFIGKDIVYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  D LRY+   
Sbjct: 307 SLFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYAA 366

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G + T    T +D ++
Sbjct: 367 KLSARIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFAGQLST----TLADPAL 422

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                    EI +  + +   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 423 YQTFVDAAAEIAQAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 483 TMGLNLFRVLMTYLKPVLPALSAR 506


>gi|325507278|gb|ADZ18916.1| methionyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328914829|gb|AEB55662.1| methionyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 551

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 235/510 (46%), Gaps = 44/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +VD   +  +D  D L IS D F RTT   H D  +  +K++  KG I     
Sbjct: 64  AGMGYQEYVDMYHKIHKDTFDKLGISIDFFSRTTNPFHKDLVQDFYKELKSKGLIENQIS 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQH------NPVQWM------- 160
              YS  +  +  D  V        + GA G   Q   A +      NP   +       
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVNPRSKLSGSQLVL 183

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  F  L    D LL+Y ++     LP   R  V  ++K+ L+  +++R    WGI 
Sbjct: 184 KETEHAFLHLERMVDPLLAYIDT---CYLPEHVRKFVTDYIKN-LRPRAITRD-LSWGIP 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           +PD P  + YVW DA   Y++ T      L NPD  K  FW  +    +  IGKD + FH
Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAASLSNPDAWK-DFWLEESTEYVQFIGKDNIPFH 297

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A  +PA  L  ++P  K   + S  F L +G + SKS GN +D    ++   +D LRY L
Sbjct: 298 AAIFPAMELGQSIPYKKMDALVSSEFYLLEGYQFSKSEGNYVDIDSFLDTYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN ++R ++   K+ +  +  +     + D 
Sbjct: 358 AATAPETSDSEFTFIDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELAYSTDLLEDQDR 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
             L    +++++ +E+     + +A   ++ L +  + YF+ Q PW+L K     R   +
Sbjct: 418 KFLDHAQKIVRDAQEHYSKYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGFTHRVEAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P  A +I+ +L
Sbjct: 478 LFCACYCQKLLALISYPIIPGTAWEIWRML 507


>gi|213970875|ref|ZP_03398998.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301383774|ref|ZP_07232192.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302059918|ref|ZP_07251459.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130517|ref|ZP_07256507.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213924398|gb|EEB57970.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 682

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P    + +     
Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +FF L A+   L S+  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L    PD     +W  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D  
Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500
             V  + V + RQL I L+  +P LA      L VA    D+++   +  Q L P   L 
Sbjct: 473 QAVCALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|225352686|ref|ZP_03743709.1| hypothetical protein BIFPSEUDO_04314 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156651|gb|EEG70045.1| hypothetical protein BIFPSEUDO_04314 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 620

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 253/554 (45%), Gaps = 73/554 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+    G IYKG  
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263
           GI +P     D+P   +YVW DA+  YL+ +        +P+  +A +W        + +
Sbjct: 236 GIPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPETPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L  N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  +++
Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLM 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP       T+ D ++LS        +   ++N     AL++ + +V ++++Y
Sbjct: 415 NKNF-GEIPALDESEMTDEDRALLSETKAAFDTVGSLIENHRQKNALSEAMRVVGDINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             A +PW++K  NP R  TVL+V  + +     LL  F+P  A K+++ L          
Sbjct: 474 ISATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLP 532

Query: 488 SLDQRL---KPGFM 498
            L++     KPGFM
Sbjct: 533 RLEEVEDLDKPGFM 546


>gi|28871289|ref|NP_793908.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999383|sp|Q87XN0|SYM_PSESM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28854539|gb|AAO57603.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331015679|gb|EGH95735.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 682

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P    + +     
Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +FF L A+   L S+  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L    PD     +W  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVDANAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D  
Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500
             V  + V + RQL I L+  +P LA      L VA    D+++   +  Q L P   L 
Sbjct: 473 QAVCALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|330877326|gb|EGH11475.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 682

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P    + +     
Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +FF L A+   L S+  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKDSKHFFFDLPAFDTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L    PD     +W  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D  
Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500
             V  + V + RQL I L+  +P LA      L VA    D+++   +  Q L P   L 
Sbjct: 473 QAVCALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|261493681|ref|ZP_05990200.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494348|ref|ZP_05990842.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309997|gb|EEY11206.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310681|gb|EEY11865.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 692

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 236/505 (46%), Gaps = 43/505 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   A
Sbjct: 4   QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEVHFVCADDAHGTPIMLNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +++   +        +IS+D++  T  + +      ++K +   G I   
Sbjct: 64  DKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEENRQITTDIYKTLKANGFIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160
             S  +      +  D  V KG      A+ QY +      + ++P+  +          
Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVVKESEHFFFDLPSFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ F
Sbjct: 240 GFEIPDAENKFFYVWLDAPIGYMASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 300 HSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQANTYLKHLDPECLRYYYA 359

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    +D  ++ D   +RVN+D+ N + NL SR+ S I K ++G +    A    DE+
Sbjct: 360 AKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLDDEA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           + +  +   + I    +N+  ++A+  ++ L  + ++Y D + PW + K     A    V
Sbjct: 416 LFNEFTAQAETIANFYENREFNKAIRAIMELTDKANKYIDDKAPWVIAKEEGKEAELQAV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + +E+ R L   L+  +PKLA +
Sbjct: 476 CSMGIELFRVLMSYLKPVLPKLAER 500


>gi|145480273|ref|XP_001426159.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393232|emb|CAK58761.1| unnamed protein product [Paramecium tetraurelia]
          Length = 842

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 179/347 (51%), Gaps = 45/347 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+T + Y NAQPHIGH Y MI AD +A++  +  L     TGTDEHG K+ ++A+N 
Sbjct: 393 KQIITTPLFYVNAQPHIGHLYSMIYADAIAKYKSVKLL-----TGTDEHGLKVYRSAKNQ 447

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + + D  S  F+ +A+   I YD F+RTT+ +H    +  W  + + G I K  Y 
Sbjct: 448 PI--QQYCDSISNQFQQLANSF-IKYDHFVRTTDPQHIMKVQKNWNLLQNNGFILKDTYK 504

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y   +E++ N                H   Q++EEE YFF+    +D L +     P 
Sbjct: 505 GYYCQVEESFVN----------------HKTDQYLEEENYFFKFD--KDYLETCITKAPS 546

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
                  +NE+   + + +  +S  ++ + WGI++P+D   ++YVW+DAL  YL    + 
Sbjct: 547 -----RYQNELKQLIINSIC-ISRPKQRYYWGIEVPNDANQLIYVWLDALLGYLQEEQH- 599

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                         +HVIGKDI+RFHA+YWP+FL   N     ++  H   +    K+SK
Sbjct: 600 ------------HYMHVIGKDIVRFHALYWPSFLKGINNQSTTELIVHNHWIRNNMKMSK 647

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           SLGNVIDP ++++    + +R + + +     D  +++  L+K  N 
Sbjct: 648 SLGNVIDPFQLLKTYNQNQIRLYFLTQGPQNMDVSFEEQKLEKCWNT 694


>gi|332039844|gb|EGI76239.1| methionyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 705

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 252/558 (45%), Gaps = 59/558 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MPMPRKLFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMRGHEVHFVGADDAHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +   +   D   I++D++  T    +H   + +++ +   G I 
Sbjct: 61  AAEKAGKTPQQFVADIAAGRKPYLDGFHIAFDNWSSTDSPENHALSQAIYRDLKAAGLIA 120

Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWM--- 160
                 +Y  +   +  D     E  K GA  QY ++              NP   +   
Sbjct: 121 TKTIEQFYDPQKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFV------KSGLKDLS 208
                  E YFF+LS    + L + ++  +   L  E  N++  +       K GL D  
Sbjct: 181 TPVLKSSEHYFFKLS--DPRCLEFLQNWTQDGKLQTEVANKIREWFTKDADGKGGLGDWD 238

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           +SR    +GI+IPD P    YVW+DA   YL +        G   + + AD     +H I
Sbjct: 239 ISRDAPYFGIEIPDAPSKYFYVWLDAPVGYLASLKNYLGKIGIDYERYIADPAVEQVHFI 298

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGV 322
           GKDI+ FH ++WPA L  +    P +V  HGF+ ++ GEK+SKS G  +DP++ +  +G+
Sbjct: 299 GKDIVYFHTLFWPAMLHFSGRKTPNQVNVHGFLTVNNGEKMSKSRGTGLDPLKYL-SLGM 357

Query: 323 DA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +   LRY+L  +++   +D  ++++    RVN+DL     N+VSR+   + K + G +  
Sbjct: 358 NPEWLRYYLAAKLSGKNEDIDFNREDFMLRVNSDLIGKYVNIVSRAAGFLSKRFGGRLTQ 417

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438
             +F     ++L         +      +   +AL  +++L   V+ Y D  KPWEL K 
Sbjct: 418 --SFDAQGAALLQDIHAAAPALAALYDGRDYGKALRDIMALADRVNGYTDEHKPWELAKD 475

Query: 439 -TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI----------FDILFVADENRCFQ 487
             N  R   V  V V     L   L   +P LA ++          +D+       + +Q
Sbjct: 476 PLNDARLHQVCSVLVNAFAALTRYLTPVLPALARQVETLTGLPMGRWDVQQSVAAIQPYQ 535

Query: 488 SLDQRLKPGFMLHKTFDP 505
            L QR+ P  +L   F+P
Sbjct: 536 HLMQRVDPK-LLDALFEP 552


>gi|302348036|ref|YP_003815674.1| Methionyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328448|gb|ADL18643.1| Methionyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 576

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 245/511 (47%), Gaps = 45/511 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +++A  Y N  PH+G    ++ ADV AR+ +L G DV+F TG+DEHG  I   A+  
Sbjct: 3   KYIVASAWPYSNFIPHLGTVLHLLSADVYARYLKLMGHDVVFVTGSDEHGTPIELEARKR 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   DQ      ++    +  +  + RT    H +  R  +  +  +G ++     
Sbjct: 63  GIKPKELTDQVHAYDVELFKKFEFDFSLYSRTESPIHKEFVREFFLNLQRRGYVFPQDEE 122

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQ--------WM 160
             Y   D+ +  D  +        Y+ A G Q  N           NP          W+
Sbjct: 123 MPYCPNDKMFLPDRFIEGTCPYCGYEHARGDQCDNCGRLLTPRDLINPRCAICGATPIWL 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           +   Y+  L   Q+KLLS+ +S     L    +N  I +VK GLK  +L+R   +WGI+ 
Sbjct: 183 KTTNYYIDLGKVQEKLLSWLQSSE---LQDSVKNYSIEWVKQGLKPRALTRD-IEWGIQA 238

Query: 221 PDD--PQYIMYVWIDALTNYLTTTG-YLDNPDG---SKAKFW--PA--DLHVIGKDILRF 270
           P +      +YVW DAL  Y++ T  YL +  G   S  ++W  P+   ++ IGKD + F
Sbjct: 239 PFEGAENKTIYVWFDALLGYVSATKEYLMSKGGDENSWKQWWFDPSTRSVYFIGKDNIPF 298

Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326
           H+I  P+  +++  P  LP ++ +  ++L++G   SKS  +G  ID  E +E    D  R
Sbjct: 299 HSIILPSLFMASGDPYVLPWRISATDYLLYEGRHFSKSRRVGVWID--EALEIAPADYWR 356

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + L+R      D  +      + VN++L + IGNL  R +S +   +DG++P   A    
Sbjct: 357 WALIRMRPESGDVSFQWKEFYRIVNSELNDDIGNLAYRVLSFVKSRFDGVMPPATAPDTR 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + +  ++ E+M N  + RA   V+ +    +RY +   PW+L K + +RA T
Sbjct: 417 DKETLEEATSLASKVIEHMDNVELKRASEFVLEVARLGNRYLNESAPWDLIKRDRERAGT 476

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ V   +++ +A L+  F+P +A  ++  L
Sbjct: 477 VINVAASIVKTVAHLITPFMPSIAEDLWHQL 507


>gi|193215432|ref|YP_001996631.1| methionyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|226710901|sp|B3QT85|SYM_CHLT3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|193088909|gb|ACF14184.1| methionyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 700

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 242/530 (45%), Gaps = 58/530 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++TA+ Y N   H+GH A   + AD+  RF RL G DV+   G+DEHG  I 
Sbjct: 1   MSQYKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRFKRLKGEDVIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             A   GV+ +V VD+ ++RN    A    IS+D + RT+   HH+T +  +  I  KG 
Sbjct: 61  LTADKEGVSPQVVVDRYHNRNSEAFAKC-GISFDHYGRTSSPVHHETAQEFFLDIEKKGI 119

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD---------------GQYYNAQH--NPVQWM- 160
             K     +Y      + +D  V                    G Y +A    NP   + 
Sbjct: 120 FTKKVEKQFYDEESRHFLSDRYVTGTCPVCGNPDANGDQCEKCGTYLSANELINPKSKLT 179

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSL 209
                  E   ++F L  +Q KL  + E H +       R  VI++    ++ GL D ++
Sbjct: 180 GKTPILKETLHWYFPLGRFQKKLEDFIEGHAK-----TWRQNVINYSRTWLRQGLGDRAI 234

Query: 210 SRKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD-- 259
           +R    WG+K+P    +    ++YVW DA+  Y+++T         PD  K  +W +   
Sbjct: 235 TRD-LPWGVKVPLEGEEAKDKVLYVWFDAVLGYISSTKEWAAKQGQPDLWKT-YWQSPET 292

Query: 260 --LHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
             +H IGKD + FHA+ +PA L++ N        L   V +  F+  +G+K SKS    +
Sbjct: 293 RLIHFIGKDNVVFHALMFPAILMAKNENADAQYVLVDNVPASEFMNFEGKKFSKSRNYAV 352

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              E +E+   D LRY L       +D  +     + R N +LA+ +GN V R+V     
Sbjct: 353 YLHEFLEKFPADTLRYSLAINYPESRDTDFSWKDFQNRTNGELADTLGNFVKRAVDFTNS 412

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            + G +P      E   ++        ++  E ++N  I  A    +      +RY    
Sbjct: 413 KFQGEVPAECTI-EDWNALGEGWHGGFKKYEEALENFHIREACFTAMDFARFANRYLTES 471

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +PW++ KT P++A+ ++ + + +   LA +    +P+ + KIFD+L V++
Sbjct: 472 EPWKVIKTEPEKAAKIMAMALNLCETLATVFAPILPETSAKIFDMLGVSE 521


>gi|270261058|ref|ZP_06189331.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044542|gb|EFA17633.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 722

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 228/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 53  KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHEVHFICADDAHGTPIMLKAQQ 112

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 113 LGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYGRLKENGFIKNRTI 172

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + ++           
Sbjct: 173 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPI 231

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 232 LRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 288

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH
Sbjct: 289 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSSTELYHFIGKDIVYFH 348

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 349 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 408

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++
Sbjct: 409 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFGGQL----ADNLADPAL 464

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                     I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 465 YQTFVDAAGSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 524

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 525 SMGINLFRVLMTYLKPVLPSLTER 548


>gi|37525501|ref|NP_928845.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|68565992|sp|Q7N6J6|SYM_PHOLL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|36784929|emb|CAE13847.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 675

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 228/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGKEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   ++          +SYD++  T  + +      ++ ++   G I     
Sbjct: 66  MGIAPEEMIATVNQEHHQDFTGFSVSYDNYHSTHSEENQTLSTKIYLELKKNGHIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y      +  D  V KG      A+ QY        + ++P + +            
Sbjct: 126 SQLYDPEKNMFLPDRFV-KGSCPKCKAEDQYGDNCEVCGSTYSPTELINPRSAVSGATPE 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 185 MRETEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G+    +FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFQNLCDKRGNLNFDEFWAKDSTADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGYRKPTNVFVHGYVTVNGAKMSKSRGTFIKASTYLDHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVN+D+ N + NL SR+   I K ++G +    A   +D ++
Sbjct: 362 KLSARIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFNGKL----ADKLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                   + I E   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQQFIDGAKVIAEEFNNREFSKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTFLKPVLPSLAER 501


>gi|29840409|ref|NP_829515.1| methionyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301687|sp|Q822N0|SYM_CHLCV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29834758|gb|AAP05393.1| methionyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 550

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 233/509 (45%), Gaps = 43/509 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + +V    +  +D  D L IS D F RTT   H       + ++  KG +     
Sbjct: 64  VGLGYQEYVSMYHKVHKDTFDKLGISLDFFSRTTNPFHKAIVEDFYLELKSKGLVENQIS 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQH------NPVQWM------- 160
              YS  ++ +  D  V        + GA G   Q   A +      NP   +       
Sbjct: 124 FQLYSEDEKRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLINPRSKLSGSQLVL 183

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  +F L    + LL++ E      LP   R  V+ ++K+ L+  +++R    WGI 
Sbjct: 184 KETEHAYFHLERMVEPLLAFIEKA---YLPEHIRKFVVDYIKN-LRPRAITRD-LSWGIP 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           +PD P  + YVW DA   Y++ T      ++ PD  K  FW  +    +  IGKD + FH
Sbjct: 239 VPDFPNKVFYVWFDAPIGYISATMDWAASVNTPDLWK-DFWLEESTEYVQFIGKDNIPFH 297

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A  +PA  L  ++P  K   + S  F L +G + SKS GN +D    ++   +D LRY L
Sbjct: 298 AAIFPAMELGQSIPYKKMNALISSEFYLLEGAQFSKSEGNFVDMDAFLDTYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                   D  +     K R N++L    GN ++R ++   K+    +  P A  + D  
Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFRELTCPEALEDKDRQ 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVL 448
            L  C R++QE +       + +A + ++ L +  + YF+ Q PW+L K     R   +L
Sbjct: 418 FLDDCQRIVQEAQAYYSKYSLRKACSAIMELAALGNVYFNDQAPWKLLKEGFAHRVEAIL 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +      + LA++    +P  A +I+++L
Sbjct: 478 FCACYCQKLLALIAYPILPGTAWEIWNML 506


>gi|319764075|ref|YP_004128012.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823650|ref|YP_004386953.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317118636|gb|ADV01125.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329309022|gb|AEB83437.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 689

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 236/542 (43%), Gaps = 56/542 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K++++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ A
Sbjct: 5   KIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVDFVGADDAHGAPIMIAAEKA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D++  T    +H   + ++  +   G I      
Sbjct: 65  GKTPQQFVADIAAGRKQYLDGFHIAFDNWHSTDAPENHALAQQIYLDLKANGLIETRTIE 124

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPV--------------QWM 160
            ++      +  D  +             G + +   A + P               Q  
Sbjct: 125 QFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCGAVYAPTELINPYSALSGAKPQLK 184

Query: 161 EEEGYFFRLSAYQDKLLSYYES--------HPEFILPIER----RNEVISFVKSGLKDLS 208
             E +FF+LS    + + + +          PE    I+     R        SGL D  
Sbjct: 185 TSEHFFFKLS--DPRCVEFLKEWTQDGVHVQPEVAAKIKEWFGTRTNPDGSTSSGLDDWD 242

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           +SR    +GI+IPD P    YVW+DA   YL +   L    G     + AD      H I
Sbjct: 243 ISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLLARRGQDYAAYMADPALEQYHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGV 322
           GKDI+ FH ++WPA L  +    P K+  HGF+ ++ GEK+SKS G  +DP++ +  +G+
Sbjct: 303 GKDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYL-SLGM 361

Query: 323 DA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +   LRY+L  ++    +D  ++ +    RVNADL     N+ SR+   I K + G +  
Sbjct: 362 NPEWLRYYLGAKLNGRNEDIDFNPEDFMARVNADLIGKYVNIASRAAGFITKRFGGKL-- 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G  +E  +++L+        I    + +   RA+ + + L   V+ Y DA KPWEL K 
Sbjct: 420 -GTVSEDGQALLAQLRAHKDAIVAAYEARDTARAVRETMLLCDRVNAYVDANKPWELAKK 478

Query: 440 N--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
                R   V    +E  R L I L+  +P++A  +   L V  E   F  +D+ L  G 
Sbjct: 479 EGMEARLQDVCSTCIEAFRILTIYLKPILPQVAADVAAFLIVPPEQ--FDGVDRPLGAGH 536

Query: 498 ML 499
            +
Sbjct: 537 QI 538


>gi|253990367|ref|YP_003041723.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781817|emb|CAQ84980.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 675

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 229/504 (45%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  +   AQ  
Sbjct: 7   KLLVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGKEVHFICADDAHGTPVMLKAQQM 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  +   N  + +D      +SYD++  T  K + +    ++  +   G I     
Sbjct: 67  GIAPEEMIAAVNQEHHQDFIG-FSVSYDNYHSTHSKENQELSTKIYLALKKNGHIKSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A+ QY        + ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGSCPKCKAEDQYGDNCEVCGSTYSPTELLNPRSAVSGATPE 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ + L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 185 MRETEHFFFDLPAFSNMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G+ +   FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFQNLCDKRGNLSFDDFWAKDSTADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGYRKPTNVFVHGYVTVNGAKMSKSRGTFIKASTYLDHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVN+D+ N + NL SR+   I K + G +    A   +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFSGKL----ADKLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                   + I E   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQKFIDGAKVIEEEFNNREFSKAIREIMTLADLANRYVDEQAPWVVAKEEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTFLKPVLPNLAER 501


>gi|86140954|ref|ZP_01059513.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832896|gb|EAQ51345.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 693

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 239/516 (46%), Gaps = 39/516 (7%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+ AR+ R  G DV +  G+DEHG  I+  A+  G+
Sbjct: 8   ITAALPYTNGPIHIGHLAGVYVPADIYARYLRGMGKDVAYICGSDEHGVAISIKAKKEGI 67

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+  +  +D  +   IS+D++ RT+ + HHDT    +K +  KGD  +      
Sbjct: 68  TPQEVVDKYHKIIKDSFEDFGISFDNYSRTSAQVHHDTASEFFKTLYAKGDFIEEVTEQL 127

Query: 128 YSLRDEAYYND------------DEVYKGAD---GQYYNAQH--NPVQWM--------EE 162
           +      Y  D            +E Y       G   NA    NP   +        E 
Sbjct: 128 FDAEANQYLADRFVTGTCPKCGHEEAYGDQCENCGSSLNATDLINPKSTISGSKPVLKET 187

Query: 163 EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             +F  L  Y+D L  +  + H +   P     +  S++  GL+  +++R   DWGI +P
Sbjct: 188 RHWFLPLDRYEDFLKKWILDGHKKDWKP-NVYGQCKSWIDEGLRPRAVTRD-LDWGIPVP 245

Query: 222 DDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274
            D     ++YVW DA   Y+++T      +G   + +W AD    +H IGKD + FH I 
Sbjct: 246 VDGAEGKVLYVWFDAPIGYISSTKEWAAREGKNWEDYWKADDTKLVHFIGKDNIVFHCII 305

Query: 275 WPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331
           +P+ L    +  LP  V ++ F+  +G K+S S    +   E +EE     D LRY L  
Sbjct: 306 FPSMLEAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPGQQDVLRYTLTA 365

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + R N +L    GN ++R V +  K Y+G IP    F   DE +L
Sbjct: 366 NAPETKDNDFTWADFQARNNNELVAIFGNFINRVVVLTNKYYEGKIPQALDFNAEDEKVL 425

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +        I  +++      A  +++++    ++Y    +PW+  KT+P+R  TV+Y+ 
Sbjct: 426 AEMKAYPAVIASSIERYRFREAQNELMNVARLGNKYLADAEPWKTFKTDPERTKTVMYIA 485

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +++   LA+L + F+P  A  +  +L +  E+   Q
Sbjct: 486 LQIAGTLAVLSEPFLPHTAKTLKQMLNIESEDPLMQ 521


>gi|261749393|ref|YP_003257078.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497485|gb|ACX83935.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 561

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 254/538 (47%), Gaps = 40/538 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   K  ++ A  Y N   HIGH A   + AD+  R+ R    +V+F  G+DEHG  I  
Sbjct: 3   KSNNKYTVTAAFPYANGPIHIGHLAGVYLPADIFVRYLRRKKKEVIFICGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T K  V++     +D  +   I +D++ RT+   H       +KK+  +  I+
Sbjct: 63  QAKKENTTPKEIVNKYHFMIKDCFENFGIHFDNYSRTSTVIHQKISTSFFKKLHKEKKIF 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY--------KGADGQYYNA------------------QH 154
           +     +Y  + + +  D  +Y        K A G    +                    
Sbjct: 123 EKVSEQYYDNQAKQFLADRYIYGICPHCKHKEAYGDQCESCGSSLSPEELINPLSTISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           NPV   + + ++F L+ YQ+ L  +     +    +    +  S++  GL+  +++R   
Sbjct: 183 NPVL-KKTKHWYFPLNEYQNFLEKWILMDHQKDWKVNVYGQAKSWLDQGLQPRAITR-DL 240

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKDILR 269
           DWGI IP +   ++YVW +A   Y+++T  +          +W       +  IGKD + 
Sbjct: 241 DWGIPIPKEIGKVLYVWFEATIGYISSTIEWAKRKKKDWKPYWKDQRTKLIQFIGKDNIV 300

Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
           FH I +PA L + N    LP K+ ++ F+  + EKIS S    +   E + +     D L
Sbjct: 301 FHCIIFPAVLKAYNQGYILPDKILANEFLNLENEKISTSRNWGVWVHEYLRDFPNQQDTL 360

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L+  +   KD  ++    +K  N +L   +GN V+RS+++I K  +G+IP PG F+ 
Sbjct: 361 RYILIANMPEKKDNNFNWKDFQKTNNTELVAILGNFVNRSLTLIQKYNNGIIPHPGIFSI 420

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +D+SIL    +  + I + +++     AL   + L    ++Y   ++PW +KKT   R  
Sbjct: 421 TDKSILKKIRKYPENIGDLIESFRFREALVCFMDLARLGNKYLTEEEPWNIKKTE-QRIE 479

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLKPGFMLHKT 502
           T+LYV+++++  LA L + F+P  ANK+  +L + A      +++ + L PG +L K+
Sbjct: 480 TILYVSLQIVGMLAQLAELFLPYTANKLLKMLRLEAYFWNKIENVKEFLCPGHVLGKS 537


>gi|113461322|ref|YP_719391.1| methionyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031364|sp|Q0I3W7|SYM_HAES1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|112823365|gb|ABI25454.1| methionyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 683

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 61/547 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   
Sbjct: 7   QILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLKADQM 66

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV   ++  D   ++  D +   +IS+D++  T    + +    ++ K+   G I     
Sbjct: 67  GVKPEQLIADVQQKHMADFSG-FNISFDNYHSTHSDENRELVEAIYHKLKQNGFIKTRII 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  +   ++A +  D   KG      A+ QY       +A ++P++ +            
Sbjct: 126 SQLFD-PEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELISPRSTVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + ++GL+   +SR    +G 
Sbjct: 185 LKESEHFFFDLPAFESMLTEWIRSGS---LQQEVANKMQEWFEAGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV-----IGKDIL 268
           KIP+      YVW+DA   Y+ +     N  G K+      FW  + H      IGKDI+
Sbjct: 242 KIPNTDNKYFYVWLDAPIGYMAS---FKNLCGKKSGIDFDSFWSKESHAELYHFIGKDIM 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 299 YFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYY 358

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + D   +RVN DL N + NL SR+ S I K +DG +    A    D
Sbjct: 359 YAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKL----ADKLDD 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
           + +        + I +  +N+   +A+ ++++L  + ++Y D + PW + K  +  D   
Sbjct: 415 KMLFDEFIAQSELIADYYENREFGKAIREIMALTDKANKYVDEKAPWVIAKDESRTDELQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTF 503
            V  + +E+ R L   L+  +P LA +    L   +  EN     LD ++ P       F
Sbjct: 475 QVCSMGIELFRVLIGYLKPVLPNLAARAEAFLNTQLTWENVASPLLDHQIAP-------F 527

Query: 504 DPIFPRF 510
            P+F R 
Sbjct: 528 KPLFSRL 534


>gi|254361962|ref|ZP_04978093.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093509|gb|EDN74489.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 692

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 236/505 (46%), Gaps = 43/505 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   A
Sbjct: 4   QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEVHFVCADDAHGTPIMLNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +++   +        +IS+D++  T  + +      ++K +   G I   
Sbjct: 64  DKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEENRQITTDIYKTLKANGFIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160
             S  +      +  D  V KG      A+ QY +      + ++P+  +          
Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVVKESEHFFFDLPSFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ F
Sbjct: 240 GFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 300 HSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQANTYLKHLDPECLRYYYA 359

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    +D  ++ D   +RVN+D+ N + NL SR+ S I K ++G +    A    DE+
Sbjct: 360 AKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLDDEA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           + +  +   + I    +N+  ++A+  ++ L  + ++Y D + PW + K     A    V
Sbjct: 416 LFNEFTAQAETIANFYENREFNKAIRAIMELTDKANKYIDDKAPWVIAKEEGKEAELQAV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + +E+ R L   L+  +PKLA +
Sbjct: 476 CSMGIELFRVLMSYLKPVLPKLAER 500


>gi|194336292|ref|YP_002018086.1| methionyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|226710911|sp|B4SGQ6|SYM_PELPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194308769|gb|ACF43469.1| methionyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 700

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 247/542 (45%), Gaps = 63/542 (11%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+ Y N   H+GH A   + AD+  R+ RL G D++   G+DEHG  I   A+ 
Sbjct: 6   KTLVTTALPYANGPVHLGHLAGVYLPADLYVRYMRLKGEDIIHIGGSDEHGVPITITAER 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K  VD+  R   +      IS+D + RTT + HH T +  +  I +KG   +   
Sbjct: 66  EGISPKDVVDRYHRMNSEAFSKCGISFDYYGRTTSEVHHKTAQEFFTDIEEKGIFIRKSE 125

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------------- 160
             ++  + + + +D  V             G   +      +P++ +             
Sbjct: 126 KLFFDRKADRFLSDRYVTGTCPICNNTEANGDQCEQCGTHLSPLELINPKSKLSDATPEL 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
            E   ++F L  +QD+L SY   H +     + R  V+++    +K GLKD +++R    
Sbjct: 186 RETMHWYFPLGRFQDQLESYVHQHED-----DWRQNVLNYTHTWLKQGLKDRAITRD-LS 239

Query: 216 WGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIG 264
           WGIK+P + +     ++YVW DA+  Y++ T       G   +   +W       LH IG
Sbjct: 240 WGIKVPLESEEAEGKVLYVWFDAVLGYISFTREWAEKLGQSERWKEYWQNPECRLLHFIG 299

Query: 265 KDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           KD + FH +  PA L++ N         L   V +  F+  +G K SKS    +   E +
Sbjct: 300 KDNVVFHTLMLPAILMAWNEGRQSECYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEFL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+   D LRY +       KD  +     + R N +LA+ +GN + RSV      +DG +
Sbjct: 360 EKFPADTLRYSIAMNYPENKDTDFSWQDFQNRTNGELADTLGNFIKRSVDFTNARFDGEV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P    ++E   + + +C ++  +I           A++  + +    +R+    +PW+L 
Sbjct: 420 PWD--YSEDLLNNVLLCDQI-DDIARAYDGFHFREAVSSSMDIARNANRFLTQNEPWKLI 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           KT+PD A+ V+ +++ +   L+IL    +P+  N+I  +L          ++D  +KPG 
Sbjct: 477 KTDPDAAARVMSISLNLCHALSILFYPVIPETCNRIHAMLGFDG------TIDSLIKPGV 530

Query: 498 ML 499
            L
Sbjct: 531 SL 532


>gi|269125233|ref|YP_003298603.1| methionyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310191|gb|ACY96565.1| methionyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 599

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 235/526 (44%), Gaps = 64/526 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  + A  Y N   HIGH     +  D+ +R+ R+ G  VL  +GTDEHG  I   A   
Sbjct: 10  ILAAPAWPYANGPRHIGHVSGFALPCDMFSRYQRMAGNKVLMVSGTDEHGTPILVQADKE 69

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +   D+ SR        L +SYD F RTT + H+   + ++K + D G I+     
Sbjct: 70  GVGPREVADRYSRVIAGDLQALGMSYDLFTRTTTRNHYAVVQEIFKGLYDNGYIFPKTTL 129

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNA--QHNPV--------------QWM 160
           G  S        D  +        Y GA G Q  N   Q +PV              Q++
Sbjct: 130 GAISPSTGRTLPDRYIEGTCPICSYDGARGDQCDNCGNQLDPVDLINPRSRINGEKPQFV 189

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDWG 217
           E E +   L A+ D L  Y  S        + R  V+ F  + L+DL   ++SR   DWG
Sbjct: 190 ETEHFMLDLPAFTDALSDYLRSKQG-----QWRPNVLKFSLNLLEDLQPRAISRD-LDWG 243

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL---HVIGK 265
           + +P     D P   +YVW DA+  Y + +        +P+  +A +   D    + +GK
Sbjct: 244 VPVPLEGWRDRPDKRLYVWFDAVVGYFSASVEWARRSGDPEAWRAWWQDPDALSYYFMGK 303

Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WPA LL                 L LP +V +  F+  +G K S S   VI
Sbjct: 304 DNIVFHSEIWPAMLLGYSGKGDKGGKPGSLGALNLPTEVVASEFLTMEGRKFSSSRQVVI 363

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +E   VDALRY++       +D  +     ++R N +L    GNLV+RS++M  K
Sbjct: 364 YVKDFLERYDVDALRYYVAVAGPETQDTDFTWQHFRERNNNELVAQWGNLVNRSLNMAAK 423

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++ G IP  G  T+ D ++L         +   +       A+ +   +V E + Y   Q
Sbjct: 424 EF-GAIPEAGELTDVDRALLERSRAAFDRVGAELGRSRFKNAVTEAFEVVREANGYLSTQ 482

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW+++  +  R  T+L+V ++V+     LL  F+PK ++K+  +L
Sbjct: 483 QPWKVE--DKARKGTILHVALQVVDDAKTLLTPFLPKSSDKVHKML 526


>gi|268317124|ref|YP_003290843.1| methionyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334658|gb|ACY48455.1| methionyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 699

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 240/516 (46%), Gaps = 46/516 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++ ++ A+ Y N   HIGH A   + AD+  R+ RL G DVLF  G+DE G  I   A 
Sbjct: 7   DRILVTAALPYANGPIHIGHLAGAYLPADLYCRYQRLKGRDVLFICGSDELGVAILMRAL 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG------ 117
             G T +  VD+     RD      +S+D + RTT   H +T +  ++++ +KG      
Sbjct: 67  EEGTTPQAIVDRYHPMIRDSFARFGMSFDYYGRTTSPVHFETSQDFFRRLDEKGVFKLKT 126

Query: 118 -----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------Q 158
                D   G +     +R        E   G   +   +  +P               +
Sbjct: 127 EKQLYDPEAGIFLADRFVRGTCPICGYEDAYGDQCERCGSSLSPTDLINPRSVLSNATPE 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E   ++  L  +Q KL ++  +HPE+   +    +V S+++ GL+D +++R    WG+
Sbjct: 187 LRETTHWYLPLGDFQPKLEAWIATHPEWKPNV--LGQVRSWLQQGLRDRAVTRD-IPWGV 243

Query: 219 KIPDD---------PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LHV 262
            +P+D            ++YVW DA   Y++ T       G      ++W  +    +H 
Sbjct: 244 PVPEDVARRHGVPAEGKVLYVWFDAPIGYISATREWAQQKGDPEAWRRYWQDERTRLIHF 303

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +PA L++     LP  V ++ F+  +G K+S S G  +   E +EE  
Sbjct: 304 IGKDNIVFHCLMFPAMLMAHGEFVLPDNVPANEFLNLEGRKLSTSRGWAVWLHEYLEEFP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L   +   +D  +     ++RVNA+LA+ +GN V R+++   +  +  +P   
Sbjct: 364 PDLLRYALATMLPETRDADFSWKEFQQRVNAELADILGNFVHRTLTFAQRFAERRVPPLR 423

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                DE +L   +   + I    +      A+ + ++L    ++YF+  +PW  +KT+P
Sbjct: 424 NPRSVDEEVLRELATFPERIGSAYEQFRFREAVQETMNLARLGNKYFNDTEPWHTRKTDP 483

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +  ++V++++   L IL++  +P  A ++ ++L
Sbjct: 484 QACANTIHVSLQICAALGILMEPVLPFAAARLREML 519


>gi|20092839|ref|NP_618914.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|25009364|sp|Q8TIU5|SYM_METAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19918142|gb|AAM07394.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 712

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 225/491 (45%), Gaps = 39/491 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    + AD+ AR  R +G +V F  G+D HG  I   A+  G+T
Sbjct: 15  VTCGLPYANGKAHIGHLRTYVPADIFARSLRKEGREVTFVCGSDTHGTPIVVNAEELGIT 74

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K  V+   ++F +    L + +D F  T +  +H+    +  ++ +K  +Y       Y
Sbjct: 75  PKELVEIYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEKDYVYPKIIEIAY 134

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163
                 +  D           E  +G +      +H                P ++  +E
Sbjct: 135 CPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEYRHQE 194

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF+LS + D L+ Y  +  +       RN  + +VK GL D  ++R   +WG++ P  
Sbjct: 195 HFFFKLSEFGDYLMDYLSN--DLGGTTNARNYALGWVKQGLTDWCITR-NLEWGVRFPGH 251

Query: 224 PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279
              ++YVW+DA   Y+  T  +      S  KFW  +   +H IG DI   H I+WPA L
Sbjct: 252 EDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGEGEIVHFIGGDITYHHCIFWPAML 311

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337
             A+  +P  V + G +  + +K SK+ G V+   E   + G   D LRY+L    +  K
Sbjct: 312 NGADYSVPTAVVASGMVKIEDKKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYTSHTK 371

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +  +    L++++NA+L   +GN + R++    K+Y G +P      E    I       
Sbjct: 372 ELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNY-GEVPEGKLEPEVSAEI----EEA 426

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L+E++E M      +A+   ++L S  + YF + +PW+L K +      V+Y  + + + 
Sbjct: 427 LKEVKEAMAEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRSACGQVIYNCLHLAKA 486

Query: 458 LAILLQAFVPK 468
           L+++ +  +P+
Sbjct: 487 LSLIFEPVLPQ 497


>gi|242238640|ref|YP_002986821.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130697|gb|ACS84999.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 676

 Score =  183 bits (465), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 233/503 (46%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  ++Q S+  +      DIS+D++  T  + + +   ++++++ + G I     S
Sbjct: 67  GLAPEQMIEQVSQEHQRDFTGFDISFDNYHSTHSEENRELSGLIYRRLKENGFIKSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             +   +++ +  D   KG      A  QY        A ++P + +             
Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L A+ D L S+  S     L  +  N++  +  +GL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPAFSDMLQSWTRSG---ALQEQVANKMQEWFDAGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIHFDEFWSKDSTADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHIADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                  Q I +   ++   +A+ ++++L    +RY D Q PW + K     A   ++  
Sbjct: 419 QTFIEAAQTIADAYDSRESGKAVREIMALADLANRYVDEQAPWVVAKEEGRDAELQSICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P LA +
Sbjct: 479 MGIHLFRVLMTYLKPVLPALAAR 501


>gi|54308361|ref|YP_129381.1| methionyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|68565982|sp|Q6LSZ7|SYM_PHOPR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46912789|emb|CAG19579.1| putative methionyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 680

 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 226/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  +++ S+  +      DIS+D++  T    + +    ++ ++ DKG I     S
Sbjct: 67  GMEPEQMIEEVSKEHQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160
             +    E +  D  V KG      A+ QY +   N      P   +             
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLIDPKSAVSGATPIM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++D L ++ +S     L  E  N++  + +SGL    +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFEDMLKAWTKSG---ALQTETSNKMQEWFESGLHQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +   D    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETSKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 303 LFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVN+D+ N I NL SR+   I K +DG +    A  E      
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLSETFAEPELYAEFA 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
           +   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 NAADRIAELYETRE------FSRAIREITALADKANQYIDEKAPWVVAKQEGKDQELQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             V + + R L   L+  +P L  +
Sbjct: 477 CSVGINLFRVLITYLKPVMPLLTER 501


>gi|229816972|ref|ZP_04447254.1| hypothetical protein BIFANG_02226 [Bifidobacterium angulatum DSM
           20098]
 gi|229785717|gb|EEP21831.1| hypothetical protein BIFANG_02226 [Bifidobacterium angulatum DSM
           20098]
          Length = 620

 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 251/553 (45%), Gaps = 71/553 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+  + G IYKG  
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFKQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIG 264
           GI +P     D+P   +YVW DA+  YL+ +       G    +  W  D      + +G
Sbjct: 236 GIPVPVKDWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDSEAWRAWWNDPSTPGYYFMG 295

Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G V
Sbjct: 296 KDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIV 355

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I 
Sbjct: 356 IYVKDILSRYPVDAVRYYISIAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLIA 415

Query: 371 KDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           K++ G IP       T+ D ++L+  +         ++N     AL + + +V  +++Y 
Sbjct: 416 KNF-GEIPAADENEMTDEDRALLAETNEAFATAGNFIENHRQKAALLEAMRIVGNINKYI 474

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            A +PW++K  NP R  TVL+V  + +     LL  F+P  + K+++ L           
Sbjct: 475 SATEPWKIKD-NPARLGTVLHVAAQAVSDANHLLAPFLPHASQKVWEALGGKGTFSPLPH 533

Query: 489 LDQRL---KPGFM 498
           +++     KPGFM
Sbjct: 534 IEEVEDLDKPGFM 546


>gi|227326675|ref|ZP_03830699.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 676

 Score =  183 bits (464), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 228/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG      A  QY        A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPE 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A+ + L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRETEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADKLADAEL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
               +     I E   ++   RA+ ++++L    +RY D Q PW + K     +    + 
Sbjct: 418 YKTFTDAATSIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDEDLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLSQR 501


>gi|326335395|ref|ZP_08201583.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692460|gb|EGD34411.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 690

 Score =  183 bits (464), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 238/506 (47%), Gaps = 39/506 (7%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV+F  G+DEHG  I+  A+  G 
Sbjct: 7   ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVVFICGSDEHGVAISIKAKKEGT 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  +D+ ++  +D      IS+D++ RT+   H++T    ++ + DKGD  +      
Sbjct: 67  TPQKIIDKYNKIIKDSLFAFGISFDNYSRTSLPIHYETASKFFRTLYDKGDFIEETSEQL 126

Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM--------EE 162
           Y  +   +  D  V     K  + + Y  Q              NP   +        + 
Sbjct: 127 YDEQAGQFLADRFVIGTCPKCGNEEAYGDQCERCGTSLNATDLINPKSTLTGSKPVLRKT 186

Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + +F  L  Y D L  +  E H     P     +V S++  GL+  +++R   DWGI +P
Sbjct: 187 KHWFLPLQNYSDFLEKWIIEGHKNDWKP-NVYGQVKSWLDDGLRPRAVTRD-LDWGIPVP 244

Query: 222 DDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIY 274
            D     ++YVW DA   Y+++T      +G     +W       +H IGKD + FH I 
Sbjct: 245 IDGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWTPYWKDKNTKLIHFIGKDNIVFHCII 304

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVR 331
           +PA L +  +  LP+ V ++ F+  +G K+S S    +   E +EE     D LRY +  
Sbjct: 305 FPAMLKAEGSYILPENVPANEFLNLEGSKLSTSKNWAVWLNEYLEEFPSQQDTLRYVITA 364

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + R N +L    GN ++R + +  K Y  ++PTP  F++ D+ + 
Sbjct: 365 NAPETKDNDFTWKDFQARNNNELVAIYGNFINRVMVLTEKYYKNIVPTPHEFSKEDKEVF 424

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +      Q I ++++      A  +++++    ++Y   ++PW+L K +P R  T++YV 
Sbjct: 425 AQIKEFTQRIEQSLERYRFREAQQELMNIARLGNKYLADEEPWKLIKEDPKRVETIMYVA 484

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   LAI  + F+P  + K+  +L
Sbjct: 485 LHIATALAITSEPFLPFTSEKLKQML 510


>gi|303256180|ref|ZP_07342196.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860909|gb|EFL83984.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 700

 Score =  183 bits (464), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 237/512 (46%), Gaps = 50/512 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++++TA+ Y N   H GH  E I AD+  R  R+ G  V F    D HG  I  +AQ  G
Sbjct: 6   IFLTTALPYANGNFHFGHIMEYIQADIWVRHQRMCGSTVHFVGADDAHGAPIMISAQKKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT + +V + S       D   I +D +  T  K + +  + ++K++   G IY      
Sbjct: 66  VTPQEYVAEISAGRAKYLDGFFIRFDHWHSTDSKENTELAQDIYKRLKKAGLIYSKEIEQ 125

Query: 127 WYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NP--------VQWME 161
           +Y    + +  D  +       GA  QY ++              NP        ++  +
Sbjct: 126 YYDPVRQMFLADRFIKGTCPKCGAPDQYGDSCEVCASVYRPTDLINPYSALSGSKLELRK 185

Query: 162 EEGYFFRLS-------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            + +FF+LS         Q    +  +  P     I  +          L D  +SR   
Sbjct: 186 SKHFFFKLSDPNCVEFLRQWTRSTAPDGTPRLQSQIVAKTAEWLGKDGDLSDWDISRDAP 245

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLD----NPDGSKAKFWPADLHVIGKDILR 269
            +GI+IPD+P    YVW+DA   YL +   Y +    N +          +H+IGKDI  
Sbjct: 246 YFGIEIPDEPGKFFYVWLDAPIGYLASLKAYCESKGINFEALLETSTTEQIHIIGKDIAY 305

Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--L 325
           FH ++WPA L  +  P  +P  V++HGF+   G+K+SKS G  +DP+ V  E+G+D   L
Sbjct: 306 FHTLFWPAMLHFSGKPFRVPDHVWAHGFVTVDGQKMSKSRGTGLDPL-VYLELGMDPEWL 364

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   ++    +D  +       R N+DL     N+ SRS   ++K ++G +  P A  
Sbjct: 365 RYYFAYKLNSKVEDVDFSSADFISRTNSDLVGKYVNIASRSAGFLVKRFEGRVSDP-AIA 423

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ES  S+++       +I  + +++   +AL  V+ L ++V+ Y D ++PWEL K  P+RA
Sbjct: 424 ES--SLIAEIKAAAPDINASFEDREYGKALRAVMELANKVNEYVDQKQPWELAK-QPERA 480

Query: 445 S---TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +    V  VT+E  R L + L+  +P+ A  +
Sbjct: 481 AELHAVCSVTLEAFRLLTLFLKPVLPRTAENV 512


>gi|212712130|ref|ZP_03320258.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM
           30120]
 gi|212685177|gb|EEB44705.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM
           30120]
          Length = 675

 Score =  183 bits (464), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 234/510 (45%), Gaps = 44/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +  +   ++  ++      ISYD++  T  + + +   +++ K+ + G I     S
Sbjct: 67  CITPEEMIAAMNQEHQNDFAGFQISYDNYHSTHSEENKELSELIYGKLKNNGFIKNKTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             Y   ++  +  D   KG      A+ QY       +A ++P   +             
Sbjct: 127 QLYD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTDLINPRSVVSGATPVI 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R +  +G +
Sbjct: 186 RETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDSPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L     D +  +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRSDLNFDEFWNKDSKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++    D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHFDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K + G +    A  E  +  +
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFAGKLSANLAEPELYQQFV 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
                  + I ++  N+   +A+ ++++L    +RY D + PW + K          +  
Sbjct: 423 DAA----KVIGDDFTNREYGKAVREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + + + R L   L+  +P L  ++ + L V
Sbjct: 479 MGINLFRVLMTYLKPILPSLTKRVEEFLKV 508


>gi|251792930|ref|YP_003007656.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534323|gb|ACS97569.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 686

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 236/510 (46%), Gaps = 54/510 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G D+ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNDIHFVCADDAHGTPIMLKAD 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+T +  +D      + MAD    +IS+D++  T  + + +    ++ ++ + G I  
Sbjct: 65  QMGITPEQLIDDVRH--KHMADFAGFNISFDNYHSTHSEENREFSEFIYNRLKENGFIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              S  Y   ++  +  D   KG             + +   A ++P + +         
Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELINPHSVVSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                + E +FF L +++  L ++  S    PE +      N++  + ++GL+   +SR 
Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGSLQPEVV------NKMQEWFEAGLQQWDISRD 235

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGK 265
              +G +IP+      YVW+DA   Y+ +   L   + S     FW  D      H IGK
Sbjct: 236 APYFGFQIPNTEGKYFYVWLDAPIGYMASFKNLCKRESSIDFDSFWCKDSDVELYHFIGK 295

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FH+++WPA L  A    P  +F HG++   GEK+SKS G  I     ++ +  + L
Sbjct: 296 DIMYFHSLFWPAMLEGAGFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECL 355

Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +++   D    + +   +RVN DL N + NL SR+   I K +DG +    A  
Sbjct: 356 RYYYAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AAA 411

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D+++ +      ++I    +N+   +A+ ++++L  + ++Y D + PW + K     A
Sbjct: 412 LDDQALFNEFIAQSEQIATYYENREFGKAIREIMALTDKANKYIDDKAPWVIVKEEGKDA 471

Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANK 472
               V  + +++ R L   L+  +PKLA +
Sbjct: 472 ELQAVCSMGIQLFRVLMGYLKPVLPKLAER 501


>gi|89902044|ref|YP_524515.1| methionyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123091151|sp|Q21TB9|SYM_RHOFD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89346781|gb|ABD70984.1| methionyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 700

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 240/542 (44%), Gaps = 61/542 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L+++TA+ Y N   HIGH  E I AD+  R+ R+ G  V F    D HG  I  AA+  
Sbjct: 4   QLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMMGNAVHFVCADDCHGAPIMIAAEKV 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I +D++  T    +H+  + +++ +   G I     +
Sbjct: 64  GKTPQQFVADIASGRKPYLDGFHIGFDNWHSTDGAENHELAQAIYRDLKAAGLISTRVIA 123

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQ--------------WM 160
            ++      +  D     E  K GA  QY        A ++P +                
Sbjct: 124 QFFDTEKNMFLPDRFIKGECPKCGAKDQYGDNCEECGAVYSPTELKNPYSALSGVTPVLR 183

Query: 161 EEEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLSL 209
           + E YFF+LS      + ++  +      +  L  E  N++  ++      K  L D  +
Sbjct: 184 DSEHYFFKLSDPRCVEFLEQWTTDTNPRGQSRLQAEVYNKIKEWLLPDAEGKRDLGDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYL-------------TTTGYLDNPDGSKAKFW 256
           SR    +GI+IPD P    YVW+DA   YL              TTG   + D   A   
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPIGYLAALKNRFIKLAGDATTG-AQHYDDFMADPA 302

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FH ++WPA L  +    P  VF HGF+    EK+SKS G  +DP++ 
Sbjct: 303 TEQYHFIGKDIITFHTLFWPAMLHFSGRKTPNAVFVHGFLTVNSEKMSKSRGTGLDPLKY 362

Query: 317 IEEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +  +G++   LRY+L  ++ A  +D  +  +    RVN+DL     N+ SR+   I K +
Sbjct: 363 L-SLGMNPEWLRYYLATKLTARNEDVEFSPEDFMARVNSDLVGKYINIASRAAGFIAKRF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G +   G  ++   ++L         I +  + +   +AL + + L   V+ Y DA KP
Sbjct: 422 GGQL---GVISDDGAALLKQIQIERTSIEQLYEAREFAKALRETMLLADRVNEYVDANKP 478

Query: 434 WELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           WEL K      R   V  V +E  R L   L+  +P LA ++   +F+  E   F S+ Q
Sbjct: 479 WELAKQTGMETRLHDVCTVCIEAFRALTAYLKPVLPLLAAQV--EVFLNIEPLSFASVSQ 536

Query: 492 RL 493
            L
Sbjct: 537 TL 538


>gi|329942996|ref|ZP_08291770.1| methionyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848152|emb|CBY17153.1| methionyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|328814543|gb|EGF84533.1| methionyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 551

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 235/510 (46%), Gaps = 44/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +VD   +  +D  D L IS D F RTT   H D  +  +K++  KG I     
Sbjct: 64  AGMGYQEYVDMYHKIHKDTFDKLGISIDFFSRTTNPFHKDLVQDFYKELKSKGLIENQIS 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQH------NPVQWM------- 160
              YS  +  +  D  V        + GA G   Q   A +      NP   +       
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVNPRSKLSGSQLVL 183

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  F  L    D LL+Y ++     LP   R  V  ++K+ L+  +++R    WGI 
Sbjct: 184 KETEHAFLHLERMVDPLLAYIDT---CYLPEHVRKFVTDYIKN-LRPRAITRD-LSWGIP 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           +PD P  + YVW DA   Y++ T      L NPD  K  FW  +    +  IGKD + FH
Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAVSLSNPDAWK-DFWLEESTEYVQFIGKDNIPFH 297

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A  +PA  L  ++P  K   + S  F L +G + SKS GN +D    ++   +D LRY L
Sbjct: 298 AAIFPAMELGQSIPYKKMDALVSSEFYLLEGYQFSKSEGNYVDIDSFLDTYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN ++R ++   K+ +  +  +     + D 
Sbjct: 358 AATAPETSDSEFTFIDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELAYSTDLLEDQDR 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
             L    +++++ +E+     + +A   ++ L +  + YF+ Q PW+L K     R   +
Sbjct: 418 KFLDHAQKIVRDAQEHYSKYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGFTHRVEAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P  A +I+ +L
Sbjct: 478 LFCACYCQKLLALISYPIIPGTAWEIWRML 507


>gi|307353949|ref|YP_003895000.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157182|gb|ADN36562.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 669

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 233/510 (45%), Gaps = 40/510 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  + ++  + Y N   HIGH    + AD   RF R  G +V+F  G+D HG  +  +++
Sbjct: 3   KSPVLVTCGLPYTNGPCHIGHLRTYVPADFYVRFLRHCGEEVVFICGSDNHGTPVVISSE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +   ++   +F +    +++ +D F  T +  +H   R +   + + G IY+  
Sbjct: 63  AEGISPREICERYHTHFYETFRKMEVIFDRFGMTDDPANHKRTRSIVTDLINNGYIYEKT 122

Query: 124 YSGWYSLRDEAYYND----------DEVYKGADGQYYNAQH-------NPV--------Q 158
            S  Y    E +  D           E  +G +      +H       +PV        +
Sbjct: 123 VSQCYCPHCEMFLPDRYVEGTCPHCGEKARGDECDQGCGKHLEPGEVLDPVCKICGEKAE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E++ +FF+L  + D L  +    PE    +  RN  + ++  GL D  ++R T DWG+
Sbjct: 183 MREQDHFFFKLGDFNDFLKGFL---PELKGTLNARNYAMGWINEGLHDWCITR-TLDWGV 238

Query: 219 KIPDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIY 274
           K P     ++YVW+DA   Y+  T  + +   G+  +FW  D    H IG+DI+  H I+
Sbjct: 239 KFPGRDDLVVYVWVDAPIGYMAFTEEWAEKTGGNWEQFWKGDAPITHFIGQDIIYHHCIF 298

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVRE 332
           WPA L  +    P  + + G +       SKS G V+   +   ++G+  D LRY+L+  
Sbjct: 299 WPALLKGSGYSTPYSIVASGMVKIDDRTFSKSRGYVVWTNDDYLDLGLSPDYLRYYLLSY 358

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +  K+  +     + RVN +L + +GN + R+V    K   G IP  GA    DE IL 
Sbjct: 359 TSHTKELNFSWREFQARVNNELVDTLGNFIYRTVHFASKKLGG-IPDIGA----DEEILE 413

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              +         +      ++ ++++L S  + Y     PW++ K + + A  V+   +
Sbjct: 414 EIKKRTALAESAAREYEFKSSIEEMMALASFGNTYIQTNAPWKMIKEDREGAEKVIRNCL 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++++ LA+L  + +P+ A  I++ L   D+
Sbjct: 474 QIVKALALLFDSVIPEKAQNIWEQLGYVDK 503


>gi|331001236|ref|ZP_08324862.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
 gi|329568963|gb|EGG50759.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
          Length = 700

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 236/512 (46%), Gaps = 50/512 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++++TA+ Y N   H GH  E I AD+  R  R+ G  V F    D HG  I  +AQ  G
Sbjct: 6   IFLTTALPYANGNFHFGHIMEYIQADIWVRHQRMCGSTVHFVGADDAHGAPIMISAQKKG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT + +V + S       D   I +D +  T  K + +  + ++K++   G IY      
Sbjct: 66  VTPQEYVAEISAGRAKYLDGFFIRFDHWHSTDSKENTELAQDIYKRLKKAGLIYSKEIEQ 125

Query: 127 WYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NP--------VQWME 161
           +Y    + +  D  +       GA  QY ++              NP        ++  +
Sbjct: 126 YYDPVRQMFLADRFIKGTCPKCGAPDQYGDSCEVCASVYRPTDLINPYSALSGSKLELRK 185

Query: 162 EEGYFFRLS-------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            + +FF+LS         Q    +  +  P     I  +          L D  +SR   
Sbjct: 186 SKHFFFKLSDPNCVEFLRQWTRSTAPDGTPRLQSQIVAKTAEWLGKDGDLSDWDISRDAP 245

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLD----NPDGSKAKFWPADLHVIGKDILR 269
            +GI+IPD+P    YVW+DA   YL +   Y +    N +          +H+IGKDI  
Sbjct: 246 YFGIEIPDEPGKFFYVWLDAPIGYLASLKAYCESKGINFEALLETSTTEQIHIIGKDIAY 305

Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--L 325
           FH ++WPA L  +  P  +P  V++HGF+   G+K+SKS G  +DP+ V  E+G+D   L
Sbjct: 306 FHTLFWPAMLHFSGKPFRVPDHVWAHGFVTVDGQKMSKSRGTGLDPL-VYLELGMDPEWL 364

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   ++    +D  +       R N+DL     N+ SRS   ++K ++G +  P A  
Sbjct: 365 RYYFAYKLNSKVEDVDFSSADFISRTNSDLVGKYVNIASRSAGFLVKRFEGRVSDP-AIA 423

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ES  S+++       +I  + + +   +AL  V+ L ++V+ Y D ++PWEL K  P+RA
Sbjct: 424 ES--SLIAEIKAAAPDINASFEGREYGKALRAVMELANKVNEYVDQKQPWELAK-QPERA 480

Query: 445 S---TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +    V  VT+E  R L + L+  +P+ A  +
Sbjct: 481 AELHAVCSVTLEAFRLLTLFLKPVLPRTAENV 512


>gi|291514795|emb|CBK64005.1| methionyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 680

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 246/515 (47%), Gaps = 42/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE ++  +++A+ Y N   HIGH A   I +D+  R+ RL G DV+   G+DEHG  I  
Sbjct: 3   KEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   + L +S+D + RT+ K H +T    ++K+ D+G   
Sbjct: 63  KARKEGVTPQQIVDRYHALIKKSFEGLGMSFDIYSRTSSKTHAETASAFFRKLYDEGKFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQ----------------HNPVQWM 160
           +     +Y    + +  D  +     K  + + Y  Q                H+ V   
Sbjct: 123 EKTSMQYYDEEAQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVSGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  Y++ L  +  + H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 VPVKRETKHWYLPLDRYEEFLREWILDGHKEWKTNV--YGQCKSWLDGGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
           DWGI +P +     ++YVW DA   Y++ T  L  PD  +  +W ++    +H IGKD +
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISATKDL-TPDWER--YWKSEDTKMVHFIGKDNI 296

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E +EE     D L
Sbjct: 297 VFHCIVFPSMLKAHGDYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVL 356

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L   +GN V+R++ +  K Y G +P  G  T+
Sbjct: 357 RYVLCANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTQKYYGGKVPACGELTD 416

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   ++  + V   +  N++N     AL   +++    ++Y    +PW++ KT+  R  
Sbjct: 417 YDRQSIAEVAAVKASLEGNIENYRFREALKDAMNIARIGNKYLADTEPWKVVKTDSARVE 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           T+L + +++    AI ++ F+P  A KI  +L V 
Sbjct: 477 TILNIALQITANTAIAIEPFMPFSAEKILRMLAVG 511


>gi|257465312|ref|ZP_05629683.1| methionyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450972|gb|EEV25015.1| methionyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 687

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 236/510 (46%), Gaps = 49/510 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MSNTRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHEVHFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  +++   +        +IS+D++  T  + + +    ++KK+ + G I 
Sbjct: 61  NAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTAMYKKLKENGFIK 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------- 160
               S  +    + +  D  V KG      A+ QY +      + ++P+  +        
Sbjct: 121 SRVISQLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A+++ L ++  S     L  E  N++  + +SGL+   +SR   
Sbjct: 180 ATPIVKESEHFFFDLPAFEEMLKAWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD-----LHVIGKDIL 268
            +G  IPD      YVW+DA   Y+ +   L +  G     FW  D      H IGKDI+
Sbjct: 237 YFGFPIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLDYQSFWQKDSTAELYHFIGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L       P  +F+HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 297 YFHSLFWPAMLEGCEQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYY 356

Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
              ++    +   D D       +RVN+D+ N + NL SR+   I K ++G + T    +
Sbjct: 357 YAAKL---NERIEDLDLSLTDFIQRVNSDIVNKLVNLASRNAGFIAKRFEGKLAT----S 409

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D+++ +      ++I  + + +  ++A+  ++ L  + ++Y D + PW + K     A
Sbjct: 410 LDDQALFAEFVAQSEQIAAHYEAREFNKAIRVIMDLCDKANKYIDDKAPWVIAKEEGKEA 469

Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANK 472
               V  + +E+ R L   L+  +P+LA +
Sbjct: 470 ELQAVCSMGIELFRILMSYLKPVLPQLAER 499


>gi|170717858|ref|YP_001784916.1| methionyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083261|sp|B0UV72|SYM_HAES2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|168825987|gb|ACA31358.1| methionyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 683

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 61/547 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   
Sbjct: 7   QILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLKADQM 66

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV   ++  D   ++  D  +  +IS+D++  T    + +    ++ K++  G I     
Sbjct: 67  GVKPEQLIADVQQKHMADF-NGFNISFDNYHSTHSDENRELVEAIYHKLTQNGFIKTRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  +   ++A +  D   KG      A+ QY       +A ++P++ +            
Sbjct: 126 SQLFD-PEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELISPRSTVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+   L  +  S     L  E  N++  + ++GL+   +SR    +G 
Sbjct: 185 LKESEHFFFDLPAFGAMLTEWIRSGS---LQQEVANKMQEWFEAGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV-----IGKDIL 268
           KIP+      YVW+DA   Y+ +     N  G K+      FW  + H      IGKDI+
Sbjct: 242 KIPNTDNKYFYVWLDAPIGYMAS---FKNLCGKKSGIDFDSFWSKESHAELYHFIGKDIM 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 299 YFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYY 358

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + D   +RVN DL N + NL SR+ S I K +DG +    A    D
Sbjct: 359 YAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKL----ANKLDD 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
           + +        + I +  +N+   +A+ ++++L  + ++Y D + PW + K  +  D   
Sbjct: 415 KMLFDEFIAQSELIADYYENREFGKAIREIMALTDKANKYVDEKAPWVIAKDESRTDELQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTF 503
            V  + +E+ R L   L+  +P LA +    L   +  EN     LD ++ P       F
Sbjct: 475 QVCSMGIELFRVLIGYLKPVLPNLAARAEAFLNTQLTWENVASPLLDHQIAP-------F 527

Query: 504 DPIFPRF 510
            P+F R 
Sbjct: 528 KPLFSRL 534


>gi|330966553|gb|EGH66813.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 682

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P    + +     
Sbjct: 120 ATRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +FF L A+   L S+  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKDSKHFFFDLPAFNTMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L    PD     +W  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D  
Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLH 500
                + V + RQL I L+  +P LA      L VA    D+++   +  Q L P   L 
Sbjct: 473 QAACALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLTHHQ-LNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|262373343|ref|ZP_06066622.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313368|gb|EEY94453.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 685

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++ +    +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEAQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      A+ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKAEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +        LP+   N++  + +SGL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFSEYLQKWTRDQGR--LPLSIANKLDEWFESGLSDWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD S   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  + +  A  E  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPELVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
            +     + Q  E RE         A+ ++++L  + ++Y D +KPW L K      +  
Sbjct: 419 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 472

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492
            V  V + + RQLAI L   +P LA ++        FD      + VA E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAIYLAPVLPTLAAQVQSFLQLESFDFASRQQILVAHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|271499792|ref|YP_003332817.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343347|gb|ACZ76112.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 676

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 229/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     S
Sbjct: 67  GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             +   +++ +  D   KG      A  QY        A ++P + +             
Sbjct: 127 QLFD-PEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L  +  S     L  +  N++  +  +GL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQGWTRSG---ALQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     +  +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLRHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A + +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----ADSLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                    I E   ++   +A+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 QTFIDAAHTIAEAYSSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L+ +
Sbjct: 479 MGINLFRVLMTYLKPVLPSLSER 501


>gi|119026553|ref|YP_910398.1| methionyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|187646707|sp|A1A3N3|SYM_BIFAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118766137|dbj|BAF40316.1| methionyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 620

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 248/530 (46%), Gaps = 70/530 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+  + G IYKG  
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFKQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELLNPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263
           GI +P     D+P   +YVW DA+  YL+ +        +P+  +A +W        + +
Sbjct: 236 GIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPTTPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I
Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLI 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP     + T+ D ++L+      + +   ++N     AL++ + +V ++++Y
Sbjct: 415 NKNF-GEIPAFDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +PW++K  NP R  TVL+   + +     LL  F+P  A K+++ L
Sbjct: 474 ISATEPWKIKD-NPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEAL 522


>gi|315633887|ref|ZP_07889176.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393]
 gi|315477137|gb|EFU67880.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393]
          Length = 686

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 235/507 (46%), Gaps = 48/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKAD 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+T +  +D      + MAD    +IS+D++  T  + + +    ++ ++ + G I  
Sbjct: 65  QMGITPEQLIDDVRH--KHMADFAGFNISFDNYHSTHSEENREFSEFIYNRLKENGFIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              S  Y   ++  +  D   KG             + +   A ++P + +         
Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELINPRSVVSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    
Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDIL 268
           +G +IP+      YVW+DA   Y+ +   L   + S     FW  D      H IGKDI+
Sbjct: 239 FGFQIPNAEGKYFYVWLDAPIGYMASFKNLCKRETSIDFDSFWCKDSDAELYHFIGKDIM 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A    P  +F HG++   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 299 YFHSLFWPAMLEGAGFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYY 358

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVN DL N + NL SR+   I K +DG +    A    D
Sbjct: 359 YAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AAALDD 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
           +++ S      ++I    +N+   +A+ ++++L  + ++Y D + PW + K     A   
Sbjct: 415 QALFSEFIAQSEQIATYYENREFGKAIREIMALTDKANKYIDDKAPWVIAKEEGKDAELQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            V  + +++ R L   L+  +PKLA +
Sbjct: 475 AVCSMGIQLFRVLMGYLKPVLPKLAER 501


>gi|221134806|ref|ZP_03561109.1| methionyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 685

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 233/508 (45%), Gaps = 55/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  ++  RF ++ G         D HG  +   AQ  
Sbjct: 7   KILVTSALPYANGSIHLGHLLEHIQTNIWTRFQKMRGHTCFSVCADDAHGTPVMLKAQEL 66

Query: 66  GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V +  + + +D+ D  DI YD++  T    +      ++ +++  G I K   
Sbjct: 67  GITPEEMVTRTRAEHHQDLLD-FDIDYDNYYVTHSDENKLLSETIYNRLNAAGYISKKTI 125

Query: 125 SGWYSLRDEAYYND-----DEVYKGADGQYYN------AQHNPVQ--------------W 159
           +  Y      +  D     D    GA+ Q  +      A ++P +               
Sbjct: 126 NQLYDPEKGMFLPDRFVKGDCPKCGAEDQNGDSCDVCAATYSPTELKNPRSVVSGATPVL 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E YFF L  ++  L  + +S     +  E  N++  + + GL+   +SR    +G +
Sbjct: 186 KDSEHYFFDLPKFEGMLKDWIQSG---AIQSEMANKLQEWFEQGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +  +++   G+   F   W AD      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWVDAPVGYMAS--FMNFCAGNNINFDEYWSADSDAELYHFIGKDIMYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WPA L  AN   P  V  HGF+   G K+SKS G  I     +E +  + LRY+   
Sbjct: 301 CLFWPAMLEGANYRKPTGVNIHGFVTVNGAKMSKSKGTFIKARTYLEHLNPEYLRYYFAS 360

Query: 332 EIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           ++    D   D D       ++VN+DL   + N+ SR  S I K +DG +      T  D
Sbjct: 361 KL---NDSVTDIDLNFEDFTQKVNSDLVGKVVNIASRCASFITKKFDGKLSQ----TILD 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---A 444
           E++L+  +   + I  + +N+  H A+ ++++L  + +++ D Q PW   K +PD+    
Sbjct: 414 EALLNEFTHASESIATHFENRQYHHAIREIMALADKANQFIDTQAPWVTIK-DPDQQQLT 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  + + + R L+I L   +P L+ K
Sbjct: 473 HDVCSMGIHMFRVLSIYLSPVLPDLSQK 500


>gi|88706623|ref|ZP_01104326.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699119|gb|EAQ96235.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 714

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 243/546 (44%), Gaps = 54/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + ++ +++A+ Y N   H+GH  E +  D+  RF R  G +  +    D HG  I  +
Sbjct: 26  QAKRRILVTSALPYANGPLHLGHILEQVQTDIWVRFQRSRGHECHYVCADDAHGTAIMLS 85

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  +D   ++    +    IS+D+F  T  +        +++++   G I +
Sbjct: 86  AERQGITAEQQIDAVHKDHLAASRAFAISFDNFYSTHSEETRHWSETIYERLKAAGAINE 145

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              +  Y   ++  +  D   KG             + +   A ++P + +         
Sbjct: 146 REITQAYD-PEKGLFLADRFIKGTCPRCKTPDQYGDNCEACGATYSPAELIDPLSALSGA 204

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E   +FFRL  + D L ++ +S     L     N++  +  SGL++  +SR    
Sbjct: 205 TPVDRESRHFFFRLPLFADMLRTWIDSG---TLQDAVANKLREWTDSGLQEWDISRDAPY 261

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP +     YVW+DA   Y+ +   Y    D +   FW         H +GKDI+ 
Sbjct: 262 FGFQIPGETDKYFYVWLDAPIGYMGSFQNYCAQRDIAFDDFWQPGGDTELYHFVGKDIIN 321

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L +A L  P  VF HGF+   G K+SKS G  I+    ++ +  + LRY+ 
Sbjct: 322 FHGLFWPAMLHAAELRTPTGVFVHGFLTVDGTKMSKSRGTFINAHHYLQHLDAEYLRYYF 381

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++ G D    + +   +RVN+D+   + N+ SR    + K ++           S+ 
Sbjct: 382 AAKLSAGVDDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFENRTSE----RCSEP 437

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L+       EI +  +++   +A+  ++ L    ++Y D  KPW + K  P +A+ V 
Sbjct: 438 ELLASFGEAGTEIAQAYEDREFSKAIRLIMELADRANQYIDQHKPWVMAK-EPGQAADVQ 496

Query: 449 YVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TF 503
            V    +   R L I LQ  +P +A +    L      RC    DQR +   + H+  TF
Sbjct: 497 LVCSTGINCFRLLMIYLQPVLPTMAERAAAYL------RCSLDWDQR-EALLLNHELATF 549

Query: 504 DPIFPR 509
           +P+  R
Sbjct: 550 EPLMQR 555


>gi|126667556|ref|ZP_01738526.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627982|gb|EAZ98609.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 679

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 233/506 (46%), Gaps = 46/506 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+ AR+ +L G    +    D HG  I   
Sbjct: 7   KQKRDILVTSALPYANGPIHLGHLLEYIQTDIWARYQKLRGHTCYYVCADDAHGTAIMLR 66

Query: 62  AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A+  G+T +  +D+    + +D  D L I +D++  T    +      +++++   G I 
Sbjct: 67  AEREGITPEQLIDRIRQEHQQDFGDFL-IRFDNYYTTHSDENRQFSEFIYRQLQQSGHIA 125

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM-------- 160
               +  +      +  D            D+ Y G + +   A ++P + +        
Sbjct: 126 TRTITQSFDPEKNMFLADRFIKGTCPKCKTDDQY-GDNCEVCGATYSPTELINPRSAVSG 184

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF+L  + D L  +  S     L  +  N++  ++ +GL D  +SR   
Sbjct: 185 ATPIEKESEHFFFKLPDFADFLAKWTRSG---TLQPQVANKLAEWLDAGLHDWDISRDAP 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-----LHVIGKDIL 268
            +G ++PD P    YVW+DA   YL +   L   +G   + FW AD      H IGKDI+
Sbjct: 242 YFGFEVPDAPGKYFYVWLDAPIGYLASFKNLCVREGINFEHFWKADSTAEVYHFIGKDII 301

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L       P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 302 NFHALFWPAILHDTGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDFLNPEYLRYY 361

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++  G D    + D    RVN+DL   + N+ SRS   I K +DG +   G  TE +
Sbjct: 362 FAAKLTGGVDDMDLNLDDFAARVNSDLVGKVVNIASRSAGFISKRFDGKL---GQVTEIN 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRAS 445
           +  L+      +E+    +N+   RA+ +++ L    ++Y + ++PW +  +K   ++  
Sbjct: 419 K--LNEFIDAGEELAGYYENREFGRAMRRIMELADIANQYVNDEQPWVVAKQKGEDEKLQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLAN 471
            +    + + R L   L   +PK A+
Sbjct: 477 AICTNALNMFRLLMTYLAPVLPKTAD 502


>gi|312131388|ref|YP_003998728.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907934|gb|ADQ18375.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 681

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 245/511 (47%), Gaps = 41/511 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   HIGH A   I ADV  R+ R  G DV F +GTDEHG  I   A+  GV
Sbjct: 5   VTAALIYANGPIHIGHLAGCYIPADVFVRYLRSKGEDVAFISGTDEHGVPITIKAKKEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+  +  +D  +   IS+D + RTT   HH T +  ++K+ DKG   +     +
Sbjct: 65  SPQEVVDKYYKIIKDSFEDFGISFDIYSRTTSPVHHQTSQEFFRKMYDKGFFDEIETEQY 124

Query: 128 YSLRDEAYYNDDEVY--------KGADG---QYYNAQHNPVQWME--------------E 162
           +    + +  D  +          GA G   +   +  +P   ++               
Sbjct: 125 FDETAQQFLADRYIVGECPVCHSPGAYGDQCEKCGSSLSPTDLIQPKSTISGSAPVMKAT 184

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + ++  L   Q ++  Y  SH E+   +    +  S++K GL+  +++R   DWG+K+P 
Sbjct: 185 KNWYLPLDKMQPEIEKYVNSHTEWKTNV--FGQCQSWLKQGLQPRAMTRD-LDWGVKVPV 241

Query: 223 DPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           +     ++YVW DA   Y++ T       G   + +  D     ++ IGKD + FH I +
Sbjct: 242 EGADGKVLYVWFDAPIGYISMTKEWAEKTGKNWEDYWRDKDTKLINFIGKDNIVFHCIIF 301

Query: 276 PAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVRE 332
           PA  ++  +  L   V ++ F+  + +KIS S    +   E ++E     D LRY L   
Sbjct: 302 PAMCMAEGSYILADNVPANEFMNLENDKISTSRNWAVWLHEYLQEFPGKQDVLRYVLTAN 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +     + + N++L    GN V+R++ +  K ++G +PTPG F E D   L 
Sbjct: 362 APETKDNDFTWKDFQTKNNSELVGIYGNFVNRTIVLTKKYFEGKVPTPGTFEEIDTQTLE 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              ++ ++I +++Q+     ALA ++ +    ++Y    +PW++K  +P+R  T+L+V  
Sbjct: 422 ALKKLPEQIGDSVQHYRFREALAGMMEVARLGNKYLADTEPWKVK--DPERVKTILFVAH 479

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++   LAI+ + F+P  + KI D +   + N
Sbjct: 480 QITGTLAIVSEPFLPFTSRKIMDQMSAKEWN 510


>gi|311694183|gb|ADP97056.1| methionyl-tRNA synthetase [marine bacterium HP15]
          Length = 676

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 226/500 (45%), Gaps = 41/500 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+  R+ ++ G +  +    D HG  I   
Sbjct: 6   KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRYQKMRGQNCYYVCADDAHGTAIMLR 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T++  +D+     ++      I +D++  T  + +      +++++ + G I  
Sbjct: 66  AEREGITSEQLIDRIREEHQEDFAGFHILFDNYYTTHSEENRYFSEYIYRQLQENGHIAT 125

Query: 122 GCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM---------- 160
              +  Y      +  D            E   G + +   A + P + +          
Sbjct: 126 RKITQSYDPEKNMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 185

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFF+L  +QD L  +  S     L  +  N++  ++ +GL++  +SR    +
Sbjct: 186 PIEKESEHYFFKLPDFQDFLAKWTRSG---TLQPQVANKLAEWLDAGLQEWDISRDAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   YL +   L N +G     FW AD      H IGKDI+ F
Sbjct: 243 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKADSTAEVYHFIGKDIINF 302

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L  A    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 303 HALFWPSMLHDAGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLNPEYLRYYFA 362

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    D    + +    RVN+DL   + N+ SRS   I K +DG +   G  TE   +
Sbjct: 363 AKLTGSVDDMDLNLEDFAARVNSDLVGKVVNIASRSAGFITKRFDGQL---GQVTE--HA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            L       +EI E  +++   RA+ +++ L    ++Y + ++PW + K    +   +  
Sbjct: 418 KLKEFIEAGKEIEEYYESREFGRAMRRIMELADIANQYVNDEQPWVIAKQE-GQDENLQA 476

Query: 450 VTVEVIRQLAILLQAFVPKL 469
           +    I    +L+    P L
Sbjct: 477 ICTNAINMFHLLMTYLAPVL 496


>gi|227487803|ref|ZP_03918119.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542444|ref|ZP_03972493.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092305|gb|EEI27617.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181642|gb|EEI62614.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 608

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 246/531 (46%), Gaps = 69/531 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 3   NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMRGENVLMVSGTDEHGTPLLVQADK 62

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G T +    + N +   D+A  L ++YD F RTT + H+   + L+  +   G + K  
Sbjct: 63  EGTTVQELATRYNEQIVHDLAG-LGLTYDLFTRTTTRNHYAVVQELFDGLYKNGYLIKQT 121

Query: 124 YSGWYSLRD-----EAYYNDDEVYKGADG----QYYNA--QHNPV--------------Q 158
             G  S        + Y        GA G    Q  N   Q +PV              +
Sbjct: 122 TKGAISPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPVDLIDPVSKINGETPK 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           ++E E +   L A  D L  + +   ++      R  V+ F  + L+D+   ++SR   D
Sbjct: 182 FVETEHFMLDLPAVADALAEWLKGREDW------RPNVLKFSLNLLEDIRPRAISRD-ID 234

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WG+ IP     DD    +YVW DA+  YL+ +        NP+  +  FW        + 
Sbjct: 235 WGVPIPVEGWQDDHAKKLYVWFDAVVGYLSASIEWAHRSGNPEAWR-DFWNDPETRSYYF 293

Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FH+  WP+ LL                 L LP +V S  ++   G K S S G
Sbjct: 294 MGKDNITFHSQIWPSMLLGYAGKGAHGGEVYELGELNLPTEVVSSEYLTMSGSKFSSSKG 353

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + +EE G D LRYF+        D  +  +   +RVN +LAN  GNLV+R+VSM
Sbjct: 354 IVIYVKDFLEEFGPDPLRYFISVAGPETNDTDFTWEEFVRRVNNELANSWGNLVNRTVSM 413

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K++ G +P PG  T++D ++LS+       + +++ N    + +   + +V E + Y 
Sbjct: 414 AYKNF-GEVPQPGELTDADRALLSLAEEAFDIVGDHLNNSRFKQGINHAMHVVGEANAYI 472

Query: 429 DAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +PW+L K  +  +R +TVL+V ++V+     LL  ++P +A ++ + L
Sbjct: 473 AEMEPWKLAKDESQRERLATVLWVALQVVSDCNTLLTPYLPHIAQQVHETL 523


>gi|268590249|ref|ZP_06124470.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314533|gb|EFE54986.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 675

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 234/503 (46%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +  +   ++  ++      ISYD++  T  + +     +++ K+ + G I     S
Sbjct: 67  GVTPEEMIAAVNQEHQNDFAGFAISYDNYHSTHSEENKVLSELIYGKLKNNGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             +   ++  +  D   KG      A+ QY       +A ++P + +             
Sbjct: 127 QLFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVISGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 186 RDSEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G     +FW      DL H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWNKNSKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSQYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D   ++ +   +RVN+D+ N + NL SR+   I K +DG +    A  E  +  +
Sbjct: 363 LSSRIDDIDFNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFDGKLSANLAEPELYQQFV 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
                  + I E+  N+  ++A+ ++++L    +RY D + PW + K          +  
Sbjct: 423 DAA----KVIGEDYNNREYNKAIREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L  +
Sbjct: 479 MGINLFRVLMTYLKPVLPGLTKR 501


>gi|221633508|ref|YP_002522733.1| methionyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|254782874|sp|B9KZR0|SYM_THERP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221156139|gb|ACM05266.1| methionyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 584

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 231/516 (44%), Gaps = 44/516 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + +  A  Y N   H+GH   + I AD  AR+HRL G  VL  +G+D HG  I  AA+
Sbjct: 3   ETIGVFVAWPYANGDLHLGHVAGVYIPADTFARYHRLRGNRVLMVSGSDAHGTPITVAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +    +    F +    L IS+D F  T    H    + +++ + +KG I+   
Sbjct: 63  REGVTPEDIFRRYHGRFLETYQQLGISFDLFTHTHTANHFRVAQDIFRTLYEKGYIFTQT 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPV 157
               Y   D  +  D  V        Y  A G   +                      P+
Sbjct: 123 QIQLYCEYDRRFLPDRYVEGTCPYCGYPNARGDQCDNCGRTLDAIDLIDPRCRLCGQRPL 182

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L A+ D+LL+Y E    +   ++  + V +F++ GLK   +SR   +WG
Sbjct: 183 P-RETEHFFFDLPAFTDRLLAYLERQTHWRPNVQ--HFVRNFIQDGLKPRPVSRD-LEWG 238

Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDI 267
           I +P  P Y   +MYVW +A+  YL+ +      +G     + W  D      + IGKD 
Sbjct: 239 IPLPI-PGYEHKVMYVWFEAVIGYLSASIEWSLAEGQPEVWQVWWRDPRARGYYFIGKDN 297

Query: 268 LRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + FHAI WPA L+    +L LP  + ++ F+  +G++ S S    I   + +     D L
Sbjct: 298 IPFHAIIWPAELMGYDESLNLPYDIPANEFLNLEGQQFSTSRNWAIWVPDFLSRYAPDPL 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R +L       +D  +   G  +R N +L    GNLV R ++ +   ++G +P PGA   
Sbjct: 358 RDYLTSIAPETRDSEFTWQGFVERNNNELLATWGNLVHRILTFVQARFEGRVPEPGALDG 417

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D  +L   +   Q I +      +  A  + ++L  EV+RY D + PW   + +   A+
Sbjct: 418 RDHLLLDQIAAGFQRIGDLYARVELKAAQREAMALAREVNRYLDEKAPWFQIREDRAAAA 477

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           T L+V +  I  L +LL   +P  + ++  +L   D
Sbjct: 478 TTLFVALRAIDSLKLLLAPILPFTSEQLHRLLGYRD 513


>gi|298676112|ref|YP_003727862.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298289100|gb|ADI75066.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 679

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 220/491 (44%), Gaps = 40/491 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    I AD+  R  +  G DV F  G+D HG  I   A+    T
Sbjct: 12  VTCGLPYANGKAHIGHLRTYIPADIYVRALKKHGQDVTFVCGSDTHGTPIVFNAEEYNTT 71

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +  +    ++F D+   +++ +D F  T +  +H+    +  K+ D G +Y       Y
Sbjct: 72  PEELIKTYHKHFDDIFKSMNVYFDAFGTTEDATNHNRTHAIVNKLIDNGYVYSKTIEIAY 131

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH-------NPV--------QWMEEE 163
               + Y  D           E  +G +      +H       +PV        ++ E+E
Sbjct: 132 CPVCDRYLPDRYVKGKCPHCAEAARGDECDQGCGKHLEPGELESPVCTLCGDAAEYKEQE 191

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LS +QD L +Y E+          RN  + +VK GL D  ++R   +WG+K P  
Sbjct: 192 HYFFKLSQFQDFLQNYLEN---LEGTSNARNYAMGWVKKGLDDWCITR-NLEWGVKFPGR 247

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279
              ++YVW+DA   Y++ T    N +  S  K W  D   +H IG DI+  H I+WPA L
Sbjct: 248 DDLVVYVWVDAPIGYISFTEEWANANNESWEKIWKDDSRIVHFIGGDIIYHHCIFWPAML 307

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337
             A    P  V + G +  + +  SKS G V+   E     G   D LRY+L    +  K
Sbjct: 308 KGAEYTQPWSVVASGMLKIENKTFSKSRGYVVWVEEDYLNHGFHPDLLRYYLATYTSHTK 367

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +  +     ++++N++L    GN   RS+    K++ G IP      E +  +L      
Sbjct: 368 ELNFSWPFFQEKINSELVGVFGNFFYRSLLFAYKNF-GYIPE----GEIESDVLDNIQST 422

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +    E M+N    +A+   +SL S  + YF + +PW L K +      V+   +++ + 
Sbjct: 423 IDGYTEAMENYEFKKAIDTALSLASYGNTYFQSNEPWRLIKEDKTECGRVIANCIQIAKA 482

Query: 458 LAILLQAFVPK 468
           L +L +  VP+
Sbjct: 483 LVVLFEPVVPE 493


>gi|46204292|ref|ZP_00050208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 159

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 103/148 (69%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K
Sbjct: 1   MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  GVT K   DQNS NFR++A +L  + DDFIRTTE+RH   C+ LW K+  KGDIY
Sbjct: 61  SAEAFGVTPKALADQNSANFRELAKILGCTNDDFIRTTEERHKVACQALWDKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            G Y GWYS+RDEA+Y +DE+ KG  G 
Sbjct: 121 LGAYEGWYSVRDEAFYAEDELVKGEGGS 148


>gi|219683370|ref|YP_002469753.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782852|sp|B8DT48|SYM_BIFA0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219621020|gb|ACL29177.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 623

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 248/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   IMVNVAWPYANGPRHIGHVAGFGVPSDVYARYQRMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124
           GVT +   ++ +R   +    L +SYD F RTT K H    + ++++    G IYKG   
Sbjct: 64  GVTPQELANRYNRVIANDLCNLGLSYDLFTRTTTKNHEHVVQEMFRQCLANGYIYKGTQK 123

Query: 125 -----SGWYSLRDEAYYNDDEV--YKGADG-QYYNAQH--------NPVQ--------WM 160
                S   +L D     +  +   +GA G Q  N  +        NPV         + 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAQGARGDQCDNCGNELDPDELINPVSKINGETPIFE 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E YF  L A  +  L++ ++   +      R  V++F     K++     T   DWGI
Sbjct: 184 ETEHYFLDLPALAEANLAWLKTRKGW------RPNVLNFSIGLFKEVKPRAITRDIDWGI 237

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVIGK 265
            +P     D+P   +YVW DA+  YL+ +        +P+  +A +W  PA    + +GK
Sbjct: 238 PVPVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRA-WWNDPATPGYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGEGSKGGEPGELGRLDLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      ++ N  LA   GNLV+R  ++I K
Sbjct: 357 YVKDILSRYPVDAVRYYISAAGPESSDSDFTWAEFVRQNNEVLAASWGNLVNRVANLIAK 416

Query: 372 DYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP       T+ D ++L+  S     +   ++      AL   +SLV ++++Y  
Sbjct: 417 NF-GQIPPIVEEKMTDEDRALLAQSSAAFDTVGALIEQHRQKSALNDAMSLVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K  +P+R  TVL+V  + +     LL  F+P  + K+++ L
Sbjct: 476 ATEPWKIKD-DPERLGTVLHVAAQAVSDANHLLAPFLPHSSQKVWEAL 522


>gi|300932586|ref|ZP_07147842.1| methionyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 611

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 249/533 (46%), Gaps = 69/533 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A+
Sbjct: 3   QRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMIGNDVLMVSGTDEHGTPLLVQAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT + H+   + L++ + D G +    
Sbjct: 63  KEGVSVQELADRYNRIIVEDLVGLGLSYDLFTRTTTRNHYAVVQELFRGLYDNGYMVTQT 122

Query: 124 YSGWYS------LRDEAYYNDDEVYKGADGQYYNAQH-----------NPV--------Q 158
             G  S      L D        +    D +     +           NPV        +
Sbjct: 123 TRGAISPSTGRTLPDRYIEGTCPICGATDARGDQCDNCGNQLDPEDLINPVSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFD 215
           +++ E +   L A  + L ++ +   ++      R  V+ F  + L+++   ++SR   D
Sbjct: 183 FVDTEHFMLDLPALAEALTTWLKGRTDW------RPNVLKFSLNLLENIRPRAMSRD-ID 235

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHV 262
           WG+ IP     D+    +YVW DA+  YL+ +        +P+  + K+W        + 
Sbjct: 236 WGVPIPIEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWR-KWWNDPEAVSYYF 294

Query: 263 IGKDILRFHAIYWPAFLLS----------------ANLPLPKKVFSHGFILHKGEKISKS 306
           +GKD + FH+  WPA LL                   L LP +V S  F+   G K S S
Sbjct: 295 MGKDNITFHSQIWPAELLGYAGEGSRGGEAGDLAEPTLNLPTEVVSSEFLTMSGSKFSSS 354

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            G VI   + ++E G D LRYF+        D  +  D   +R+N++LAN  GNLV+R+V
Sbjct: 355 KGVVIYVRDFLKEFGPDPLRYFIAMAGPETTDTDFTWDEFVRRINSELANEWGNLVNRTV 414

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SM  K++ G +P  G  T++D ++L    +  + + + +Q       + + + +    ++
Sbjct: 415 SMAHKNF-GEVPPLGTLTDADRALLDESEQAFEIVGKALQASRFKAGITEAMRIAGRANQ 473

Query: 427 YFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y  AQ+PW+L K  +  +R  TVL+V ++V+  +  +L  ++P  A KIF+ L
Sbjct: 474 YIAAQEPWKLAKDDSQRERLGTVLHVALQVVSDINTMLTPYLPFSAQKIFETL 526


>gi|51595871|ref|YP_070062.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|68565976|sp|Q66C72|SYM_YERPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51589153|emb|CAH20773.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
          Length = 675

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271
           ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
               +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGHDADLHAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|297620242|ref|YP_003708347.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379219|gb|ADI37374.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 703

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 248/546 (45%), Gaps = 62/546 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++TA+AY N   H+GHA    I ADV  RF +L G +V    GTD HG  I   A+  GV
Sbjct: 8   LTTALAYTNGPLHLGHARSTYIPADVYRRFLKLKGEEVYHVGGTDNHGVPITLTAEKEGV 67

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
                V++     +   D L++ +D+F +T    H +T +  ++++   G IY+     +
Sbjct: 68  KPIDIVERYHNAIKADLDTLNVEFDNFGQTHSDVHIETSQEFYRELRKAGYIYEKEIEQF 127

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME--------------EE 163
           Y  + + Y  D  V           +G   +       P +  E                
Sbjct: 128 YCPKCDKYLADRYVEGLCPFCGGEARGDHCEVCGRHLEPTELKEPYCVHCNTTPELKKST 187

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LSA + +L+ Y  S  +  +P   +N  +++V   L D  +SR    WG+ IPD 
Sbjct: 188 HYFFKLSALKGELIEYLNSAEK--MPEHVKNLALNWVNE-LHDWDVSR-NLKWGVPIPDC 243

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-------------------LHVI 263
              +MYVW++A   Y++ +  L    G K +  W  +                   +H I
Sbjct: 244 DDQVMYVWLEAPIGYISFSKAL----GDKWEILWKENKENKENKKTNNNNENNNEIIHFI 299

Query: 264 GKDILRFHAIYWPAFLLSAN----LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           GKDI   HA++WP  L   N      +P  V S G++  +G+K+S S   V+   + ++ 
Sbjct: 300 GKDITVHHAVFWPGMLEGVNKVNGYKMPTAVVSGGYLTLEGKKMSTSKNWVVWVADFVKN 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IP 378
              D LRYFL+      +D  +  D  +KRVN +L + IGN   RS+    + ++ + + 
Sbjct: 360 FNTDYLRYFLLANAPLYRDTDFSWDEFQKRVNTELIDNIGNFTHRSLVFANRKFEKVPLV 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 + D+++LS     + ++ E ++      AL ++I L  E + YF + +PW ++ 
Sbjct: 420 DENQLLDVDKALLSKSEETVLKVDELIREFNFKDALMEIILLGKEGNGYFQSNEPWAIE- 478

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
            + +R   V+Y   +V++ L  LL  F+P+  + +  ++   +EN      ++  KP  +
Sbjct: 479 -DEERLKQVIYTCCKVVKSLTYLLSPFMPEKTSALLGLM--NEENDLKLRGNELKKPKIL 535

Query: 499 LHKTFD 504
             K  D
Sbjct: 536 FPKISD 541


>gi|189465160|ref|ZP_03013945.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM
           17393]
 gi|189437434|gb|EDV06419.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM
           17393]
          Length = 679

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 247/517 (47%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     ++      IS+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGVTPQDIVDRYHTLIKESFKEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-RETKHWYLPLDQHESWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDTWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG++P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAA 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  T+ D   L   S V  E+ + +       A  + ++L    ++Y    +PW++ KT+
Sbjct: 413 GELTDYDRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKIAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            DR +T+L ++++++  LAI  + F+P  + K+ ++L
Sbjct: 473 MDRVATILNISLQLVANLAIAFEPFLPFSSEKLRNML 509


>gi|224537450|ref|ZP_03677989.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520976|gb|EEF90081.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 679

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 246/517 (47%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     ++      IS+D + RT+ K HHDT    ++K+ DKGD  
Sbjct: 63  RAKKEGVTPQDIVDRYHTLIKESFKEFGISFDVYSRTSSKTHHDTASEFFRKLYDKGDFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-RETKHWYLPLDQHESWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDTWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG++P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAA 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  TE D   L   S V  E+ + +       A  + ++L    ++Y    +PW++ KT+
Sbjct: 413 GELTEYDRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKIAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            DR +T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 473 MDRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|186894958|ref|YP_001872070.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|226710942|sp|B2JZK3|SYM_YERPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|186697984|gb|ACC88613.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 675

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271
           ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
               +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|162419184|ref|YP_001607553.1| methionyl-tRNA synthetase [Yersinia pestis Angola]
 gi|226710943|sp|A9R2M7|SYM_YERPG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|162351999|gb|ABX85947.1| methionyl-tRNA synthetase [Yersinia pestis Angola]
          Length = 675

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271
           ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
               +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|292488750|ref|YP_003531637.1| methionyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899904|ref|YP_003539273.1| methionyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199752|emb|CBJ46873.1| methionyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554184|emb|CBA21412.1| Methionyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172904|emb|CBX81160.1| Methionyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 676

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 223/503 (44%), Gaps = 42/503 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      DISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  IGIAPEQMIADMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------ 161
           S  Y      +  D  V             G + +  +A ++P + +E            
Sbjct: 126 SQLYDAEKGMFLPDRFVKGTCPNCKSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPVL 185

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  +   L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHA 272
           IP+ P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH+
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDRRGDIDFDAFWQQDSDAELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +
Sbjct: 303 LFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A    D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAELA----DPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                    I     ++   RA+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 QTFVDASDSIARAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P LA +
Sbjct: 479 MGINLFRVLMTWLKPVMPSLAER 501


>gi|330444658|ref|YP_004377644.1| methionyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807768|gb|AEB41941.1| methionyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 548

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 238/516 (46%), Gaps = 57/516 (11%)

Query: 6   KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ I++A+ Y N   H GH   AY  + AD  ARF RL G +VL+  G+DE+G  I   A
Sbjct: 2   RVLITSALPYANGPLHFGHITGAY--LPADAYARFCRLLGDEVLYLCGSDEYGIAITLNA 59

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+  + ++D   +  +D  + L+IS D F RTT   H    +  ++ +   G I + 
Sbjct: 60  ERAGMGYQEYIDVYHKLHKDTFEKLNISLDFFSRTTNTFHEGVVQSFYQCLQKHGLI-EN 118

Query: 123 CYSG-WYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM---------- 160
           C+S   YS  +  +  D  V            +G + Q   A +  +  +          
Sbjct: 119 CFSQQLYSEEESRFLADRYVEGECPKCGFDRARGDECQKCGADYEAIDLLYPKSKLSGAA 178

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
               E E  +F L   ++ LLS       FI     R  V  FV   +K+L     T D 
Sbjct: 179 LVLKETEHAYFHLEKMKEPLLS-------FIQGCNLREHVRKFVVDYIKNLRPRAITRDL 231

Query: 216 -WGIKIPDDPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPAD----LHVIG 264
            WG+ + D P  + YVW DA   Y++  G +D      +P+  K +FW  +    +  IG
Sbjct: 232 SWGVSVQDFPNKVFYVWFDAPIGYIS--GSMDWAASQGDPEAWK-RFWLEEDVKYVQFIG 288

Query: 265 KDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD L FHA+ +PA  +  +LP  K   + S  F L +GE+ SKS GN +D    ++   V
Sbjct: 289 KDNLPFHAVIFPAMEMGQDLPYKKADAIVSSEFYLLEGEQFSKSEGNYVDIDAFLDSYSV 348

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY L        D  +     K R N++L    GN ++R ++   K+    +  P  
Sbjct: 349 DQLRYVLAATAPESADSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNQFVELRCPSD 408

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNP 441
             E D+  L     ++ + +   +   +  A + ++ L +  + YF+ Q PW+ LK+ + 
Sbjct: 409 LMEGDKQFLKEAQDLVDKAKSCYERYSLRSACSAIMELAALGNVYFNNQAPWKLLKEGSR 468

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            R  T+L+ +    + LA++    +PK A +I+++L
Sbjct: 469 SRVETILFCSCFCQKLLALIAYPILPKSATEIWEML 504


>gi|89898167|ref|YP_515277.1| methionyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123735920|sp|Q255A6|SYM_CHLFF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89331539|dbj|BAE81132.1| methionyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 551

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 236/510 (46%), Gaps = 44/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +V+   +  +D  D L IS D F RTT   H       + ++  KG I     
Sbjct: 64  AGLGYQEYVNMYHKIHKDTFDKLKISLDFFSRTTNPFHKALVEDFYTQLKSKGLIENQTS 123

Query: 125 SGWYSLRDEAYYND-----------------DEVYK-GADGQYYNAQH-------NPVQW 159
              YS  +  +  D                 DE  K GAD +  +  H       + +  
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPRCGFDGARGDECQKCGADYEATDLIHPRSKLSGSELVL 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  +F L    + LL + +      LP   R  ++ ++K+ L+  +++R    WGI 
Sbjct: 184 KETEHAYFHLERMVEPLLDFIDKS---YLPEHVRKFIVDYIKN-LRPRAITRD-LSWGIP 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           +PD P  + YVW DA   Y++ T      ++NP+  K  FW  +    +  IGKD + FH
Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAASVNNPEAWK-DFWLEESTEYVQFIGKDNIPFH 297

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A  +PA  L  ++P  K   + S  F L +G + SKS GN ID    ++   +D LRY L
Sbjct: 298 AAIFPAMELGQSIPYKKMDALISSEFYLLEGAQFSKSEGNYIDMDAFLDTYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN ++R ++   K+ +  ++ +     + D+
Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELVYSETLLEDKDK 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
             L    R++QE RE+     + +A + ++ L +  + Y + Q PW+L K     R   V
Sbjct: 418 KFLDDAQRIVQEAREHYSKYSLRKACSAIMELAALGNIYVNDQAPWKLLKEGLAHRVEAV 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P  A +I+++L
Sbjct: 478 LFCACYCQKLLALISYPILPGTAWEIWNML 507


>gi|294649485|ref|ZP_06726908.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824613|gb|EFF83393.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 717

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 35  KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 94

Query: 66  GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++ +    +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 95  GISPEAQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 153

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 154 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPRSTLSGATPV 212

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +        LP+   N++  + ++GL D  +SR    +G 
Sbjct: 213 EKSSDHYFFKLPNFSEYLQKWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGF 270

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD S   FW  D      H IGKDI+ F
Sbjct: 271 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 330

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 331 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 390

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  + +  A  E  +S
Sbjct: 391 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPELVQS 450

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
            +     + Q  E RE         A+ ++++L  + ++Y D +KPW L K      +  
Sbjct: 451 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 504

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492
            V  V + + RQLAI L   +P LA ++        FD      + VA E   FQ L QR
Sbjct: 505 DVCSVGINLFRQLAIYLAPVLPTLATQVQAFLQLESFDFASRQHILVAHEIAQFQPLMQR 564

Query: 493 LKP 495
           + P
Sbjct: 565 VDP 567


>gi|289676763|ref|ZP_06497653.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 682

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 240/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFNAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKILLTNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|145633270|ref|ZP_01789001.1| putative ATPase [Haemophilus influenzae 3655]
 gi|144986116|gb|EDJ92706.1| putative ATPase [Haemophilus influenzae 3655]
          Length = 682

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 237/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T  K+     + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEKLIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L N +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFTHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ D   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDETLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKDAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|22126527|ref|NP_669950.1| methionyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441236|ref|NP_992775.1| methionyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806813|ref|YP_650729.1| methionyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812619|ref|YP_648386.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598738|ref|YP_001162814.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366443|ref|ZP_01888477.1| methionyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947488|ref|YP_001401424.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165924586|ref|ZP_02220418.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939604|ref|ZP_02228149.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009161|ref|ZP_02230059.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211334|ref|ZP_02237369.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400168|ref|ZP_02305681.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421769|ref|ZP_02313522.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424220|ref|ZP_02315973.1| methionyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218928663|ref|YP_002346538.1| methionyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229841503|ref|ZP_04461662.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843614|ref|ZP_04463757.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894284|ref|ZP_04509467.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229903014|ref|ZP_04518130.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270486805|ref|ZP_06203879.1| methionine--tRNA ligase [Yersinia pestis KIM D27]
 gi|25009377|sp|Q8ZG01|SYM_YERPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122980066|sp|Q1CGU4|SYM_YERPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123372633|sp|Q1C9T8|SYM_YERPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187653901|sp|A7FJJ6|SYM_YERP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187653902|sp|A4TKM9|SYM_YERPP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21959527|gb|AAM86201.1|AE013867_4 methionine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436096|gb|AAS61652.1| methionyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108776267|gb|ABG18786.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778726|gb|ABG12784.1| methionyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347274|emb|CAL20168.1| methionyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210434|gb|ABP39841.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149290817|gb|EDM40892.1| methionyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958983|gb|ABS46444.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165912520|gb|EDR31152.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923646|gb|EDR40778.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991716|gb|EDR44017.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207105|gb|EDR51585.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960254|gb|EDR56275.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050117|gb|EDR61525.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057069|gb|EDR66832.1| methionyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679924|gb|EEO76024.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689222|gb|EEO81285.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697869|gb|EEO87916.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229703682|gb|EEO90698.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|270335309|gb|EFA46086.1| methionine--tRNA ligase [Yersinia pestis KIM D27]
 gi|320015607|gb|ADV99178.1| methionyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 675

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271
           ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
               +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|327403508|ref|YP_004344346.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319016|gb|AEA43508.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 685

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 251/558 (44%), Gaps = 55/558 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K  ++ A+ Y N   H+GH   + + AD+  RF R +G DV F  G+DEHG  I   A
Sbjct: 3   KSKFTVTAALPYANGPLHLGHVAGVYLPADIFVRFLRSNGHDVAFICGSDEHGAAITLRA 62

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  VD+ ++   D      IS+D F RT+ + H +T +  +K + +KG   + 
Sbjct: 63  KKEGITPREIVDKYNQIIGDSFKQFGISFDIFHRTSAQIHIETAQDFFKVLEEKGKFIEE 122

Query: 123 CYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEEEGY 165
               +Y    + +  D                 D+  K           NPV  +  +  
Sbjct: 123 TTEQYYDEEYQQFLADRYITGECPNCQNPNAYGDQCEKCGSALSPTDLKNPVSTLSGKSP 182

Query: 166 FFRLSAYQDKLLSYYES--HP---EFIL-------PIERRNEVI----SFVKSGLKDLSL 209
             R +++    +  +E    P   E IL       P   RN+VI    S++  GL   ++
Sbjct: 183 VLRSTSHWFLPMDRHEEWLRPWIKEGILDGKQQHDPKAWRNQVIGQCMSWIDCGLHPRAM 242

Query: 210 SRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHV 262
           +R   DWG+ +P       ++YVW+DA   Y++ T      +G   K +W  +    +H 
Sbjct: 243 TRD-LDWGVPVPLPGADGKVLYVWLDAPIGYISATKQWALDNGKDWKDYWCNEDRKLVHF 301

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FHAI +P  L       LP  V ++ F+  +G+K S S    +   E +E   
Sbjct: 302 IGKDNIVFHAIIFPILLKDHGGFILPDNVPAYEFLNLEGDKFSTSRNWAVWLHEYLERYP 361

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             +D L+Y L       KD  +     + RVN +LA+ +GN ++R++ +  K Y+G +P 
Sbjct: 362 EKIDELKYTLTCIAPETKDAEFTWKEYQARVNNELADILGNFINRALVLTQKYYEGKVPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G  T  D+ +L     +   I E +    +  A A+ + L    ++Y    +PW+L KT
Sbjct: 422 CGELTAEDKQVLVDMKAIPARIAELVYQYKLRDAQAEAMMLARIGNKYLADNEPWKLVKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--------QSLDQ 491
           +P R  T++ + +++   L ++L  F+P+ A KI    FV  E + +        Q+ DQ
Sbjct: 482 DPKRVETIMNIALQITANLGLVLDPFLPETAAKIR--AFVGTEVQTWDKSGTILLQAGDQ 539

Query: 492 RLKPGFMLHKTFDPIFPR 509
              P  +  K  D    R
Sbjct: 540 TSTPTILFQKIDDEFVAR 557


>gi|320534024|ref|ZP_08034576.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133763|gb|EFW26159.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 615

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 236/528 (44%), Gaps = 63/528 (11%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 3   HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +   
Sbjct: 63  EGLSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
               S        D  +         +GA G   +   N +                 ++
Sbjct: 123 RSAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLISPRSRINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E   +F  L A    L ++ +   E       R  VI F ++ L D+     T   DWG
Sbjct: 183 VETTHWFLDLPALAQALGAWLD---EREASGTWRPNVIKFSQNLLDDIRPRAMTRDIDWG 239

Query: 218 IKIP---DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADL--HVIGKD 266
           I +P   D P   +YVW DA+  YL+ +        +P+  +A +W  P  L  + +GKD
Sbjct: 240 IPVPGWEDQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRA-WWNDPQALSYYFMGKD 298

Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI 
Sbjct: 299 NIVFHSQIWPAELLGYNGQGESGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIY 358

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + ++    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K 
Sbjct: 359 VRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKR 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G IP P      D  +L         + + +       AL + + LV E ++Y    +
Sbjct: 419 F-GQIPEPAELQAIDRVLLDAVEAGFASVGDLIAQHRQKAALGEAMRLVGEANKYVADTQ 477

Query: 433 PWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P++LK  +P    R +TVL+   + +  L ++L  F+P  AN +  +L
Sbjct: 478 PFKLKGEDPATQARLATVLHTLAQAVADLNLMLSPFLPHAANDVDRVL 525


>gi|332173575|gb|AEE22829.1| methionyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 675

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 43/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF R+ G ++      D HG  +   AQ  
Sbjct: 7   KILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRMCGHEIYSVCADDAHGTPVMLKAQEL 66

Query: 66  GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V +  + + +D+ D   + YD++  T    + +   +++ +++D G I K   
Sbjct: 67  GITPEEMVARTRAEHHQDLLDFF-VEYDNYHVTHSDENKELSELIYNRLNDAGYISKRTI 125

Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160
           S  +      +  D            E   G       A ++P +               
Sbjct: 126 SQLFDPEKNMFLPDRFVKGTCPSCGTEDQNGDSCDSCGATYDPTEMKNPRSVVSGATPIL 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  + D L ++ +S     L  E  N++  +   GL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFSDMLQAWLKSD---ALQSEISNKLEEWFDKGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IP  P    YVW+DA   Y+ +   L D  D +  +FW AD      H IGKDI  FH +
Sbjct: 243 IPGAPNKFFYVWVDAPVGYMASFKNLCDRSDINFDEFWGADSDAELYHFIGKDITYFHCL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  V  HGF+   G K+SKS G  I     +E +  + LRY+   ++
Sbjct: 303 FWPAMLEGAGFRKPTGVNVHGFVTVNGAKMSKSKGTFIKGRTYLEHLNPEYLRYYFASKL 362

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   ++VN+DL   + N+ SR  S I K +DG +         +  +++
Sbjct: 363 GANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSN----NVLEPELVA 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYV 450
              +    I +  + +  H+A+ +++ L  + +++ DA  PW   K    +A T  V  +
Sbjct: 419 EFQQAQASIAQAFEERQYHKAIREIMGLADKANQFIDANAPWVTIKDESKQAFTHDVCSL 478

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            + + R L + L+  VPKLA +
Sbjct: 479 GINLFRMLMVYLKPVVPKLAEQ 500


>gi|270285091|ref|ZP_06194485.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289114|ref|ZP_06195416.1| methionyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336487|ref|ZP_07224689.1| methionyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 550

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 238/511 (46%), Gaps = 48/511 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I   A
Sbjct: 5   RILITSALPYANGPLHFGHITGAY--LPADVYARFQRLLGKEVLYICGSDEYGIAITLNA 62

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + DKG +   
Sbjct: 63  ELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNPHHPAIVQDFYRNLQDKGLMENL 122

Query: 123 CYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQH--------------NPV 157
                YS  +E +  D  V            +G + Q   A +                +
Sbjct: 123 VTDQLYSEEEEKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKDPRSKLTGKAL 182

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E  +F L   +++LL++ E      L    RN VI ++K+ L+  +++R    WG
Sbjct: 183 SLRETEHAYFHLERMKEELLTFVEG---IYLRPHMRNFVIDYIKN-LRPRAVTRD-LSWG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILR 269
           + +P     + YVW DA   Y++ T      + +PD  K KFW  D       +GKD   
Sbjct: 238 VPVPGLENKVFYVWFDAPIGYISGTMDWAASIGDPDAWK-KFWLDDKVTYTQFVGKDNTS 296

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH++ +PA  +  +LP  K   + +  F+L +G + SKS GN+ID    +E   +D LRY
Sbjct: 297 FHSVIFPAMEMGQSLPYKKVDALVTSEFLLLEGFQFSKSEGNIIDMDAFLETYSLDKLRY 356

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L        D  +     K R N+DL    GN V+R V+   K+    +  P    + D
Sbjct: 357 VLAAIAPETSDSEFAFQEFKTRCNSDLVGKFGNFVNRVVAFAAKNGCTELSHP-QLEQQD 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAST 446
              ++   ++ +E  ++ Q   + +A + ++ L +  + YF+ Q PW+L K +  +R  +
Sbjct: 416 LEFIAEAQKLAKEAADHYQQYSLRKACSTIMELAALGNGYFNDQAPWKLAKEDLWNRVRS 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +L+      + LA++    +P+ A  I+ ++
Sbjct: 476 ILFCACYCQKLLALISYPIMPETAWTIWGMI 506


>gi|15834921|ref|NP_296680.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|13878792|sp|Q9PL07|SYM_CHLMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7190341|gb|AAF39166.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 550

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 238/511 (46%), Gaps = 48/511 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I   A
Sbjct: 5   RILITSALPYANGPLHFGHITGAY--LPADVYARFQRLLGKEVLYICGSDEYGIAITLNA 62

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + DKG +   
Sbjct: 63  ELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNPHHPAIVQDFYRNLQDKGLMENL 122

Query: 123 CYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQH--------------NPV 157
                YS  +E +  D  V            +G + Q   A +                +
Sbjct: 123 VTDQLYSEEEEKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKDPRSKLTGKAL 182

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E  +F L   +++LL++ E      L    RN VI ++K+ L+  +++R    WG
Sbjct: 183 SLRETEHAYFHLERMKEELLTFVEG---IYLRPHMRNFVIDYIKN-LRPRAVTRD-LSWG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILR 269
           + +P     + YVW DA   Y++ T      + +PD  K KFW  D       +GKD   
Sbjct: 238 VPVPGLENKVFYVWFDAPIGYISGTMDWAASIGDPDAWK-KFWLDDKVTYTQFVGKDNTS 296

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH++ +PA  +  +LP  K   + +  F+L +G + SKS GN+ID    +E   +D LRY
Sbjct: 297 FHSVIFPAMEMGQSLPYKKVDALVTSEFLLLEGFQFSKSEGNIIDMDAFLETYSLDKLRY 356

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L        D  +     K R N+DL    GN V+R V+   K+    +  P    + D
Sbjct: 357 VLAAIAPETSDSEFAFQEFKTRCNSDLVGKFGNFVNRVVAFAAKNGCTELSHP-QLEQQD 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAST 446
              ++   ++ +E  ++ Q   + +A + ++ L +  + YF+ Q PW+L K +  +R  +
Sbjct: 416 LEFIAEAQKLAKEAADHYQQYSLRKACSTIMELAALGNGYFNDQAPWKLAKEDLWNRVRS 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +L+      + LA++    +P+ A  I+ ++
Sbjct: 476 ILFCACYCQKLLALISYPIMPETAWTIWGMI 506


>gi|170720312|ref|YP_001748000.1| methionyl-tRNA synthetase [Pseudomonas putida W619]
 gi|226710914|sp|B1J1D1|SYM_PSEPW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169758315|gb|ACA71631.1| methionyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 681

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 232/517 (44%), Gaps = 46/517 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKD 266
             +G +IP +P    YVW+DA   Y+ +   L    P+     FW  D      H IGKD
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNKDSKAELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  V  HG++   G K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K  DG++    A  E
Sbjct: 356 YYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVAGDAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D 
Sbjct: 416 LTEAFLAAAP----GIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +    + + RQL I L+  +P LA      L VA
Sbjct: 472 VQAICAQGINLFRQLMIFLKPVLPVLAADAEAFLNVA 508


>gi|183602866|ref|ZP_02964227.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241191552|ref|YP_002968946.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196957|ref|YP_002970512.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183217919|gb|EDT88569.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249944|gb|ACS46884.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251511|gb|ACS48450.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295794544|gb|ADG34079.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 619

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 247/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GV
Sbjct: 2   VNVAWPYANGPRHIGHVAGFGVPSDVYARYQRMKGNDVLMVSGTDEHGTPILVEADKEGV 61

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY--- 124
           T +   ++ +R   +    L +SYD F RTT K H    + ++++    G IYKG     
Sbjct: 62  TPQELANRYNRVIANDLCNLGLSYDLFTRTTTKNHEHVVQEMFRQCLANGYIYKGTQKVA 121

Query: 125 ---SGWYSLRDEAYYNDDEV--YKGADG-QYYNAQH--------NPVQ--------WMEE 162
              S   +L D     +  +   +GA G Q  N  +        NPV         + E 
Sbjct: 122 ISPSTGRTLPDRYIEGECPICHAQGARGDQCDNCGNELDPDELINPVSKINGETPIFEET 181

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E YF  L A  +  L++ ++   +      R  V++F     K++     T   DWGI +
Sbjct: 182 EHYFLDLPALAEANLAWLKTRKGW------RPNVLNFSIGLFKEVKPRAITRDIDWGIPV 235

Query: 221 P-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PA--DLHVIGKDI 267
           P     D+P   +YVW DA+  YL+ +        +P+  +A +W  PA    + +GKD 
Sbjct: 236 PVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRA-WWNDPATPGYYFMGKDN 294

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 295 ITFHSQIWPSEMLAYNGEGSKGGEPGELGRLDLPEQVVASEFMTMEGKKFSSSRGIVIYV 354

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      ++ N  LA   GNLV+R  ++I K++
Sbjct: 355 KDILSRYPVDAVRYYISAAGPESSDSDFTWAEFVRQNNEVLAASWGNLVNRVANLIAKNF 414

Query: 374 DGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP       T+ D ++L+  S     +   ++      AL   +SLV ++++Y  A 
Sbjct: 415 -GQIPPIVEEKMTDEDRALLAQSSAAFDTVGALIEQHRQKSALNDAMSLVGDINKYISAT 473

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K  +P+R  TVL+V  + +     LL  F+P  + K+++ L
Sbjct: 474 EPWKIKD-DPERLGTVLHVAAQAVSDANHLLAPFLPHSSQKVWEAL 518


>gi|109898216|ref|YP_661471.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064668|sp|Q15UM1|SYM_PSEA6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109700497|gb|ABG40417.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 675

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 228/502 (45%), Gaps = 43/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF R+ G ++      D HG  +   AQ  
Sbjct: 7   KILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRMCGHEIYSVCADDAHGTPVMLKAQEL 66

Query: 66  GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V +    + +D+ D   + YD++  T    + +   +++ +++D G I K   
Sbjct: 67  GITPEEMVARTREEHHQDLLDFF-VEYDNYHVTHSDENKELSELIYNRLNDAGYISKRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM------------- 160
           S  +      +  D  V       GA+ Q         A ++P +               
Sbjct: 126 SQLFDPEKNMFLPDRFVKGTCPSCGAEDQNGDSCDNCGATYDPTEMKNPRSVVSGATPIL 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  + D L ++ +S     L  E  N++  + + GL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFSDMLQNWLKSD---ALQSEISNKLEEWFEKGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IP  P    YVW+DA   Y+ +   L +  G    ++W AD      H IGKDI  FH +
Sbjct: 243 IPGAPNKFFYVWVDAPVGYMASFKNLCDRSGINFDEYWGADSDAELYHFIGKDITYFHCL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  V  HGF+   G K+SKS G  I     +E +  + LRY+   ++
Sbjct: 303 FWPAMLEGAGFRKPTGVNVHGFVTVNGAKMSKSKGTFIKGRTYLEHLNPEYLRYYFASKL 362

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   ++VN+DL   + N+ SR  S I K +DG +         + ++++
Sbjct: 363 GANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSD----NVLEPALVA 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYV 450
                   I +  + +  H+A+ ++++L  + +++ DA  PW   K    +A T  V  +
Sbjct: 419 EFQHAQASIAQAFEERQYHKAIREIMALADKANQFIDANAPWVTIKDESKQAFTHDVCSL 478

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            + + R L + L+  VPKLA +
Sbjct: 479 GINLFRLLMVYLKPVVPKLAEQ 500


>gi|219870418|ref|YP_002474793.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782867|sp|B8F3E3|SYM_HAEPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219690622|gb|ACL31845.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 684

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 242/505 (47%), Gaps = 45/505 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAD 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  +++  + +  D A   +IS+D++  T  + + +    ++KK+   G I   
Sbjct: 65  KLGITPEQLIEKAKADHIADFAG-FNISFDNYHSTHSEENREYTSAIYKKLKANGFIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160
             S  +      +  D  V KG      A+ QY +      + ++P+  +          
Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGST 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L ++++ L ++  S     L  E  N+V  + +SGL+   +SR    +
Sbjct: 183 PVVKQSEHFFFDLPSFEEMLKAWTRSGS---LQPEIANKVQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD      YVW+DA   Y+ +   L +  G     FW  +      H IGKDI+ F
Sbjct: 240 GFEIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLNFDDFWKKESDAELYHFIGKDIVYF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF+HG++   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 300 HSLFWPAMLEGSEYRKPTNVFAHGYVTVDGQKMSKSRGTFIQASTYLKHIDPECLRYYYA 359

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    +D  ++ +   +RVN+D+ N + NL SR+   I K ++G +    A T  +++
Sbjct: 360 AKLNDRIEDLDFNLEDFVQRVNSDIVNKLVNLASRTAGFITKRFEGKL----ASTLENQA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +        ++I    + +  ++A+ ++++L  + ++Y D + PW + K     A    V
Sbjct: 416 LFDEFVAQSEQIATYFETREYNKAIREIMALTDKANKYIDDKAPWVIAKEEGTDAELQAV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + +E+ R L   L+  +PKLA +
Sbjct: 476 CSMGLELFRVLMSYLKPVLPKLAER 500


>gi|303249714|ref|ZP_07335918.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302651281|gb|EFL81433.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 682

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 236/502 (47%), Gaps = 43/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   
Sbjct: 4   KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S
Sbjct: 64  GITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160
             +    + +  D  V KG      A+ QY +      + ++P+  +             
Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +   L + +G    +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            +E+ R L   L+  +P+LA +
Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497


>gi|226953520|ref|ZP_03823984.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226835737|gb|EEH68120.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 721

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 35  KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 94

Query: 66  GVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++ +    +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 95  GISPEAQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 153

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 154 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPRSTLSGATPV 212

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +        LP+   N++  + ++GL D  +SR    +G 
Sbjct: 213 EKSSDHYFFKLPNFSEYLQEWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGF 270

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD S   FW  D      H IGKDI+ F
Sbjct: 271 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 330

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 331 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 390

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  + +  A  E  +S
Sbjct: 391 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPELVQS 450

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
            +     + Q  E RE         A+ ++++L  + ++Y D +KPW L K      +  
Sbjct: 451 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 504

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492
            V  V + + RQLAI L   +P LA ++        FD      + VA E   FQ L QR
Sbjct: 505 DVCSVGINLFRQLAIYLAPVLPTLAAQVQSFLQLESFDFASRQQILVAHEIAQFQPLMQR 564

Query: 493 LKP 495
           + P
Sbjct: 565 VDP 567


>gi|88811010|ref|ZP_01126266.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
 gi|88791549|gb|EAR22660.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
          Length = 678

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 240/520 (46%), Gaps = 57/520 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I   A+  
Sbjct: 4   KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKLQGNECYYVCADDAHGTPIMLKAREQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRT--TEKRHHDTCRILWKKISDKGDIYKG 122
           G+T +  +++  + +  D A  L I +D++  T   E RH  T  ++++++ D G I + 
Sbjct: 64  GITPEELIERFGTEHQADFAAFL-IEFDNYYTTHSAENRHFAT--LIYERLRDAGHIERR 120

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME--------- 161
             +  +  +   +  D  + KG      A  QY        A ++P +  +         
Sbjct: 121 EITQAFDPQMNMFLPDRYI-KGTCPRCAASDQYGDNCEVCGASYSPGELKDPVSVLSGVR 179

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRK 212
                 E +FFRL  ++  L        E+  P   + EV + +K     GLK   +SR 
Sbjct: 180 PVERTSEHFFFRLQDFESMLR-------EWANPAHTQEEVANKLKEWFDEGLKSWDISRD 232

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADL-HVIGKD 266
              +G +IPD P    YVW+DA   Y+ +   L +  G     FW     A+L H IGKD
Sbjct: 233 APYFGFEIPDAPNKYFYVWLDAPIGYMASFKNLCDRTGLDFDTFWLPGSEAELYHFIGKD 292

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A    P ++F+HGF+   G+K+SKS G  I     +  +  + LR
Sbjct: 293 IVYFHALFWPAMLEGAGFRKPTRLFAHGFLTVNGQKMSKSRGTFITARTYLHHLNPEYLR 352

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G  D   + +   +RVNADL   + N+ SR    I K + G +      T 
Sbjct: 353 YYFAAKLGSGVHDLDLNLEDFAQRVNADLVGKLVNIASRCAGFIEKRFAGRLSA----TL 408

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
           +  ++    +    +I E  + +   R + QV++L  E ++Y D QKPW L K     D+
Sbjct: 409 AAPALYRKFTAQGAQIAELYEKREYGRVVRQVMALSDEANQYIDQQKPWLLAKQADQADQ 468

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              +  + + + R L   L+  +P++A +    L +  +N
Sbjct: 469 VQMICTMGINLFRLLTAYLKPILPRMAQRAEAFLNLPAQN 508


>gi|313157540|gb|EFR56958.1| methionine--tRNA ligase [Alistipes sp. HGB5]
          Length = 691

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 241/514 (46%), Gaps = 42/514 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE ++  +++A+ Y N   HIGH A   I +D+  R+ RL G DV+   G+DEHG  I  
Sbjct: 14  KEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPITI 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   + L +S+D + RT+   H  T    ++K+ D+G   
Sbjct: 74  KARKEGVTPQQIVDRYHSMIKKSFEGLGMSFDIYSRTSSATHAKTASEFFRKLYDEGKFI 133

Query: 121 KGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQ----------------HNPVQWM 160
           +     +Y    + +  D  +     K  + + Y  Q                H+ V   
Sbjct: 134 EQTSMQYYDEETQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVSGS 193

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  Y+  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 194 VPVKRETKHWYLPLDQYEGFLREWILEGHKEWKSNV--YGQCKSWLDGGLQPRAVSRD-L 250

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
           DWGI +P +     ++YVW DA   Y++ T  L  PD     +W ++    +H IGKD +
Sbjct: 251 DWGIPVPVEGAEGKVLYVWFDAPIGYISATKDL-TPDWET--YWKSEDTKMVHFIGKDNI 307

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +P+ L +     LP+ V ++ F+  +G+KIS S    +   E +EE     D L
Sbjct: 308 VFHCIVFPSMLKAHGGYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVL 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L   +GN V+R++ +  K YDG +P  G   +
Sbjct: 368 RYVLCANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTRKYYDGEVPACGELND 427

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   +   + V   +  N+++     AL   +++    ++Y    +PW++ KT+P R  
Sbjct: 428 YDRQTVGEVAAVKASLESNIEHYHFREALKDAMNIARIGNKYLADTEPWKVVKTDPQRVG 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           T+L + +++    AI ++ F+P  A KI  +L V
Sbjct: 488 TILNIALQITANTAIAIEPFMPFSAAKILKMLSV 521


>gi|317048837|ref|YP_004116485.1| methionyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950454|gb|ADU69929.1| methionyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 677

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         DISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFDISYDNYHSTHGEENRQLSELIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L +  G+    +FW  D      H IGKDI+ FH
Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGNIDFDEFWKKDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSQYRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   + K + G +    A    D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFLTKRFGGKLSAELA----DPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +   ++I E   ++  +RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFTDASEKIGEAWASREYNRAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 478 SMGINLFRVLMTWLKPVLPSLSAR 501


>gi|90413229|ref|ZP_01221224.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325781|gb|EAS42239.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 680

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 228/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + + S+  +      DIS+D++  T    + +    ++ ++ DKG I     S
Sbjct: 67  GMEPEQMIAEVSKEHQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160
             +    E +  D  V KG      A+ QY +   N      P   +             
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPIM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++D L ++ +S     L  E  N++  + +SGL    +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFEDMLKAWTKSG---ALQTETSNKMQEWFESGLHQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +   D    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVN+D+ N I NL SR+   I K ++G +      T ++ ++ 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFEGKLSE----TFAEPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449
           +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFANAADRIAELYETREFSRAIREITALADKANQYIDEKAPWVVAKQEGQDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R L   L+  +P LA +
Sbjct: 479 VGINLFRVLITYLKPVMPLLAER 501


>gi|240949423|ref|ZP_04753764.1| methionyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296172|gb|EER46828.1| methionyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 687

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 235/510 (46%), Gaps = 49/510 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MSNTRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHEVHFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  +++   +        +IS+D++  T    + +    ++KK+ + G I 
Sbjct: 61  NAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSDENRELTTAMYKKLKENGFIK 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------- 160
               S  +    + +  D  V KG      A+ QY +      + ++P+  +        
Sbjct: 121 SRVISQLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A+++ L ++  S     L  E  N++  + +SGL+   +SR   
Sbjct: 180 ATPIVKESEHFFFDLPAFEEMLKAWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD-----LHVIGKDIL 268
            +G  IPD      YVW+DA   Y+ +   L +  G     FW  D      H IGKDI+
Sbjct: 237 YFGFPIPDAENKFFYVWLDAPIGYMASFKNLCDRTGLDYQSFWQKDSTAELYHFIGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L       P  +F+HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 297 YFHSLFWPAMLDGCEQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYY 356

Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
              ++    +   D D       +RVN+D+ N + NL SR+   I K ++G + T    +
Sbjct: 357 YAAKL---NERIEDLDLSLTDFIQRVNSDIVNKLVNLASRNAGFIAKRFEGKLAT----S 409

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D+++ +      ++I  + + +  ++A+  ++ L  + ++Y D + PW + K     A
Sbjct: 410 LDDQALFAEFVAQSEQIAAHYEAREFNKAIRVIMDLCDKANKYIDDKAPWVIAKEEGKEA 469

Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANK 472
               V  + +E+ R L   L+  +P+LA +
Sbjct: 470 ELQAVCSMGIELFRILMSYLKPVLPQLAER 499


>gi|262274495|ref|ZP_06052306.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221058|gb|EEY72372.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 678

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 230/508 (45%), Gaps = 50/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I ADV  R+ RL G  V F    D HG  I   AQ
Sbjct: 5   QRKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRLRGNTVNFICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + D    +  D A   DIS+D++  T    + +    ++ ++ + G I   
Sbjct: 65  QLGIEPEAMIADMQKEHEADFAG-FDISFDNYHSTHSDENRELASYIYTQLKNNGYINSR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWMEEEG------ 164
             S  +    E +  D  V KG      ++ QY +   N      P   +  +       
Sbjct: 124 TISQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTDLINPKSAVSGAT 182

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                   +FF L  + D L ++ +S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSVHFFFDLPQFGDMLKAWTKSG---ALQEEMANKMNEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILR 269
           G +IP +P    YVW+DA   Y+ +     N +G+    ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGEPGKYFYVWLDAPIGYMGSFKNFCNKNGNVDFDEYWKKDSDAELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGFRKPTNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++    D    + +   +RVN+D+ N + NL SR+   I K +DGM+    A     E
Sbjct: 360 AAKLNNRIDDLDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFDGMLSAECAEPALYE 419

Query: 389 SILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444
              +   R+  L E RE        RA+ ++++L  + ++Y D + PW + K     A  
Sbjct: 420 EFAAAAERIGDLYEKRE------FSRAIREIMALADKANQYVDEKAPWVVAKEEGKDAEL 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472
             +  + + + R L   L+  +P+LA +
Sbjct: 474 QAICTMGINLFRVLMTYLKPVMPELAAR 501


>gi|71892244|ref|YP_277978.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123747817|sp|Q492J8|SYM_BLOPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71796350|gb|AAZ41101.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 555

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 223/502 (44%), Gaps = 42/502 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+ G  V F    D HG  I   +Q 
Sbjct: 4   KKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLKSQQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  +  + Q  +  +       ISYD++  T      +    ++ +++ +G I     
Sbjct: 64  LNIAPEQMIAQIRQEHQRDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKSKFI 123

Query: 125 SGWYSLRDEAYYND------------DEVYK---GADGQYYNAQH--NPVQWM------- 160
           S  Y  +   +  D            D+ Y     A G  Y +    NP   +       
Sbjct: 124 SQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAACGTIYTSLELINPKSVISGTSPII 183

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E  FF L A+ D L ++  S     +  E  N+V  + K GLK   +SR    +G K
Sbjct: 184 RKSEHLFFDLPAFTDTLRTWIRSGS---IQKEVANKVEEWFKLGLKKWDISRDAPYFGFK 240

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP+  +   YVW+DA   Y+ T   L   N + S   FW ++      H IGKDI+ FH 
Sbjct: 241 IPNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHC 300

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG +   G KISKS G  I+    +  +  D LRY+   +
Sbjct: 301 LFWPAVLSGSQFRKPTNIFVHGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATK 360

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   +      RVN+D+ N I NL SR+   I + Y+G +      T +   I 
Sbjct: 361 LSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQYYNGHLSN----TLTHPLIY 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLY 449
           ++       I +  Q +  + A+ +++ L  E +RY D   PW + K    R  A ++  
Sbjct: 417 NMFIESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYS 476

Query: 450 VTVEVIRQLAILLQAFVPKLAN 471
           + +++ R L I L+  +PKLAN
Sbjct: 477 MGIQLFRVLMIYLKPVLPKLAN 498


>gi|330834236|ref|YP_004408964.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566375|gb|AEB94480.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 568

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 256/548 (46%), Gaps = 52/548 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y  + PH+G+    I+ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KILVASAWPYVQSVPHLGNLIGSILSADVFARYARLKYGKENVIFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              GV  K   DQ     +++     +IS+D++ RT  + H    R     ++    + +
Sbjct: 62  IKRGVDPKSLTDQAHEYDKELFIKTWNISFDNYTRTESEVHKKFVREFLLGVAKYITVEE 121

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHN 155
                 Y  +D+ +  D  V        ++ A G   +                      
Sbjct: 122 EELP--YCEKDKLFLPDRFVKGICPYCGFEDARGDQCDRCGKLLTPSILINPKCAICGST 179

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV     + +FF L  + + +  +  S  +  +P   +   +S++  GLK  SL+R    
Sbjct: 180 PVM-KRTKHWFFDLRPFSEPIKKWITSSED--MPENVKGTALSWLNEGLKPRSLTRDN-A 235

Query: 216 WGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPADL----HVIGKD 266
           WGI    P      +YVW +AL  YL+ T       G   K   FW  D     + IGKD
Sbjct: 236 WGIPAPFPGAEGKTIYVWFEALLGYLSATLEYFTKRGEPEKWKEFWNKDTSRSYYFIGKD 295

Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FHA+  PA L+  S +  LP  + +  ++L++G+K SKS  +G  ID    I  + V
Sbjct: 296 NIPFHAVILPAMLMASSTDYTLPTVIAATEYLLYEGQKFSKSRKIGIWIDEAPFI--MDV 353

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R+ L+R     KD  +    + + VN +L + IGNLV+R ++MI++ +D  +P+P  
Sbjct: 354 DYWRFILIRMRPEEKDMNFTWTEVIRIVNTELNDDIGNLVNRVITMIMRYFDRRVPSPTN 413

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           F E DE +L      ++++ E  +   +      +++L  E + Y + + PW+  K   +
Sbjct: 414 FKEIDEHLLERMRETVKKVGEMFEKGKLKGGTELILALARETNGYINQKAPWDKVKVEKE 473

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
            A+  LYVT  V+R +A++L   +P  A  I+  L +  +   + SL + L PG ++ K 
Sbjct: 474 DAANTLYVTFLVVRAIALMLYPIIPNKAEAIYQQLGLDIKAETWDSLMKPLDPGHIIGKP 533

Query: 503 FDPIFPRF 510
            +P+F + 
Sbjct: 534 -EPVFKKL 540


>gi|302184711|ref|ZP_07261384.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 682

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 240/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IP++P    YVW+DA   Y+ +   L    PD     +W  D      H IGKD
Sbjct: 236 PYFGFEIPEEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAALRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNSGVMVETNAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|296455053|ref|YP_003662197.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184485|gb|ADH01367.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 621

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 247/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +   +GA G   +A  N         PV        ++
Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            + E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWG
Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  
Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEETSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K  +  R STVL+V  + +     LL  F+P  A K+++ L
Sbjct: 476 ATEPWKIKD-DQARLSTVLHVAAQAVADANHLLAPFLPHSAQKVWEAL 522


>gi|119945339|ref|YP_943019.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|187647755|sp|A1SVA5|SYM_PSYIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119863943|gb|ABM03420.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 686

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 233/512 (45%), Gaps = 46/512 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E + AD+  RF RL G ++ F    D HG  I   A
Sbjct: 4   QQRKILVTCALPYANGPIHLGHMLEHVQADIWVRFQRLRGHNIHFICADDAHGTPIMLKA 63

Query: 63  QNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q  G+  T +  D  + +  D +   +IS+D++  T  + +      ++  + + G I  
Sbjct: 64  QEMGIKPTDMIADIRASHESDFSG-FNISFDNYHSTHSEENQALSSQIYIALRENGYITN 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160
              S  +    + +  D  V KG      AD QY        A ++P + +         
Sbjct: 123 RTISQLFDPEKKMFLPDRFV-KGTCPDCKADDQYGDNCDACGATYSPTEMINPKSAVSGS 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E +FF L  ++D L  + +S     L  E  N+V  + ++GLK   ++R    
Sbjct: 182 TPIMKDTEHFFFDLPQFEDMLKVWTKSG---ALQTEMANKVGEWFETGLKQWDITRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L D  +G     +W  D      H IGKDI+
Sbjct: 239 FGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKTEGLNFDDYWKKDSAAELYHFIGKDIV 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 299 NFHSLFWPAVLEGAGFRKPTAVNVHGYVTVNGAKMSKSKGTFIKASTYLDNLDPECLRYY 358

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    D    + +   +RVN+D+ N + NL SR+   I K YDG +    +  +  
Sbjct: 359 YAAKLTSRIDDLDLNLEDFTQRVNSDVVNKLVNLASRTAGFITKKYDGQLSNHVSEPQLY 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAS 445
           +S +   +     I    + +   RA+ ++++L    ++Y D + PW L K      +  
Sbjct: 419 QSFIDAGT----SIAALFEQRDFARAIREIMALADIANKYIDEKAPWALAKQEGSEVKVQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  + + + R L   L+  +PKLA +  D L
Sbjct: 475 EICSMGINLFRVLMTYLKPIIPKLAARSEDFL 506


>gi|330973103|gb|EGH73169.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 593

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAELRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLTAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|165975810|ref|YP_001651403.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|226710891|sp|B0BTA2|SYM_ACTPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|165875911|gb|ABY68959.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 682

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 235/502 (46%), Gaps = 43/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   
Sbjct: 4   KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S
Sbjct: 64  GITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160
             +    + +  D  V KG      A+ QY +      + ++P+  +             
Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEITNKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            +E+ R L   L+  +P+LA +
Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497


>gi|218675110|ref|ZP_03524779.1| putative methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 348

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 28/315 (8%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPD----DPQYIMYVWIDALTNYL 239
           I+P  RRNE+++ V+ GL D+S+SR   +   WG+ +PD    D   ++YVW DAL NYL
Sbjct: 10  IVPAHRRNEMLALVRRGLTDISVSRSAERARGWGVPVPDGGGPDADDVVYVWFDALANYL 69

Query: 240 TTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  G+  +    + ++W     +H++GK I +FHAIYWPA LLSA LP P  +  HG++ 
Sbjct: 70  TGLGHGSDQTLLQ-RYWNGGERIHIVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVT 128

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGV-DALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             G KI KS GN IDP  +I+  G  DALRY+L+R I  G DG +  + L+   + +LA 
Sbjct: 129 VDGRKIGKSAGNGIDPESIIDAYGTPDALRYYLLRHIRSGDDGDFSGERLEAAWSGELAG 188

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL +R ++++ + + G++P        +E +L    R+  ++        +H  LA 
Sbjct: 189 QLGNLANRVLALLYQSFGGIVPP----VPENEFVLE-AHRLPGKVARAFDTYELHVGLAD 243

Query: 417 VISLVSEVDRYFDAQKPW------------ELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +   V E +R F    PW            E +K   +R    L   +  +  +A  L  
Sbjct: 244 IFEFVGEANRRFTKGAPWADAKTLLADPASEDRKATTERLGACLAEQIYGLATVARCLLP 303

Query: 465 FVPKLANKIFDILFV 479
           F+P  A  +   L +
Sbjct: 304 FLPGSAATLHSRLGI 318


>gi|171463853|ref|YP_001797966.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193391|gb|ACB44352.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 556

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 236/522 (45%), Gaps = 61/522 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +L +++A+ Y N Q HIGH  E +  D+  RF R+ G +V +    D HG  I   A+
Sbjct: 5   QRRLLVTSALPYANGQIHIGHLVEYVQTDIWVRFQRMCGHEVHYVGADDTHGTPIMLRAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T K  +    +  +   D   IS+D++  T    +    + ++ K+ D G I K  
Sbjct: 65  KENLTPKELIANVWKEHKRDFDNFLISFDNYYTTDSPENEKLAQSIYLKLRDAGLIEKRA 124

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161
               Y    E +  D     E  K GA  QY        A ++P                
Sbjct: 125 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDNCEKCGATYSPTDLKNPFSVVSGATPI 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
               + YFF+LS  + +      +  +  L  E RN++  +V    +S L D  +SR   
Sbjct: 185 KKVSDHYFFKLSDPRCEEFLRDWTQVKTPLQPEARNKMKEWVGQPGESKLGDWDISRDAP 244

Query: 215 DWGIKIPDDPQYIMYVWIDA-------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            +G +IPD P    YVW+DA         NY  T G L+  +  K        H IGKDI
Sbjct: 245 YFGFEIPDAPGKYFYVWLDAPIGYYASFLNYCQTKG-LNFDEWVKPDTTTEQYHFIGKDI 303

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           L FHA++WPA L  A    P  VF+HGF+   GEK+SKS G +I    VIE     +  R
Sbjct: 304 LYFHALFWPATLKFAGYRTPTNVFAHGFLTVDGEKMSKSRGTLISANSVIECGFNPEWFR 363

Query: 327 YFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           Y+   ++    D   D D        RVN+DL     N+ SRS   ++K + G++     
Sbjct: 364 YYFATKL---NDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFGGVV----- 415

Query: 383 FTESDES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              SDE+    +L   +   ++I E  + +   +AL  V+ L  +V+ + D  KPWE+ K
Sbjct: 416 ---SDEAMNNPLLKEIAAASEKIAELYEGREYAKALRTVMELADKVNGFVDENKPWEIAK 472

Query: 439 TNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +P+R +    V  +T+E  R L++ L+  +P++   + + L
Sbjct: 473 -DPEREANLQRVCSITLEAFRMLSLYLKPVIPQVVASVEEFL 513


>gi|320539122|ref|ZP_08038793.1| methionyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030760|gb|EFW12768.1| methionyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 675

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 227/503 (45%), Gaps = 42/503 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHEVYFICADDVHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V  +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I K   
Sbjct: 66  LSVKPEAMIAEMSQEHQQDFAGFNISYDNYHSTHSDENRELSNLIYTRLKENGFIKKRTI 125

Query: 125 SGWYS------LRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWM------------- 160
           S  Y       L D     +    K AD      +  +A ++P + +             
Sbjct: 126 SQLYDPEKGMFLPDRFVKGNCPTCKAADQYGDNCEVCSATYSPTELIAPKSVVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  +   L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPGFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L     D    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYIGSFKNLCDKRSDVDFDEFWCKDASTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSHFRKPTNLFVHGYVTVDGAKMSKSRGTFIKAGTYLQYLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN D+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRNAGFISKRFGGQL----ADKLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                  + I +   ++   RA+ ++++L    +RY D Q PW + K         T+  
Sbjct: 419 HTFVDAAERIGDAYASREFSRAIREIMALADLANRYVDTQAPWVVAKEAGRDTDLQTICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P LA +
Sbjct: 479 MGINLFRVLMTYLKPVLPMLATR 501


>gi|322514619|ref|ZP_08067650.1| methionyl-tRNA synthetase [Actinobacillus ureae ATCC 25976]
 gi|322119453|gb|EFX91552.1| methionyl-tRNA synthetase [Actinobacillus ureae ATCC 25976]
          Length = 685

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 237/505 (46%), Gaps = 43/505 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A
Sbjct: 4   QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I   
Sbjct: 64  AKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTEMYKKLRANGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160
             S  +    + +  D  V KG      A+ QY +      + ++P+  +          
Sbjct: 124 VISQLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E + +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PIVKESKHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G  IPD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ F
Sbjct: 240 GFPIPDAENKFFYVWLDAPIGYMASFKNLCDRSGLNFDEFWKKDSETELYHFIGKDIVYF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 300 HSLFWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYA 359

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE+
Sbjct: 360 AKLNERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLEDEA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           + +      ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V
Sbjct: 416 LFAEFIAQSEQIATHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + +E+ R L   L+  +P+LA +
Sbjct: 476 CSMGIELFRVLMSYLKPVLPQLAER 500


>gi|308187517|ref|YP_003931648.1| Methionyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058027|gb|ADO10199.1| Methionyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 677

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 233/505 (46%), Gaps = 46/505 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+   ++  +  S +  D A   ++SYD++  T    + +   +++ ++ + G I    
Sbjct: 66  LGIAPEQMIAEMKSEHEADFAG-FNVSYDNYHSTHGDENRELSALIYGRLKENGFIKNRT 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME---------- 161
            S  Y   ++  +  D   KG             + +  +A ++P + ++          
Sbjct: 125 ISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATP 183

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L ++   L ++  S     L  +  N++  + +SGL+   +SR    +G
Sbjct: 184 ILRDSEHFFFDLPSFSAMLQAWTRSGA---LQDQVANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWRKDSTTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D+LRY+  
Sbjct: 301 HSLFWPAMLEGSNFRKPNNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYA 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D +
Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKL----AAELADPA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +        ++I +    +   RA+ ++++L    +RY D Q PW + K     A    +
Sbjct: 417 LYQTFVDASEKIGDAWAAREYSRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P L+ +
Sbjct: 477 CSMGINLFRILMTWLKPVLPSLSAR 501


>gi|148825859|ref|YP_001290612.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|187647723|sp|A5UBS8|SYM_HAEIE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148716019|gb|ABQ98229.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 682

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 239/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHMRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR T  +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDTPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L N +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGVKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|50120348|ref|YP_049515.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|68565978|sp|Q6D7B6|SYM_ERWCT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49610874|emb|CAG74319.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 676

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 226/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++  + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSTTELIEPKSAVSGATPE 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           ++PD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGKL----ADKLADAEL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAGASIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKVEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPALTQR 501


>gi|307545318|ref|YP_003897797.1| methionyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217342|emb|CBV42612.1| methionyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 678

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 224/501 (44%), Gaps = 45/501 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +  G D  +    D HG  I   A+  
Sbjct: 8   KILVTSALPYANGAIHLGHLLEYIQTDIWVRFQKSRGHDCHYVCADDAHGTAIMLRAEQE 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG-------- 117
           G+T++  +D+ SR  +       + +D++  T  + +     +++ ++ +KG        
Sbjct: 68  GITSEALIDRVSREHQADFARFGVGFDNYHSTHSEENRYFSELIYTRLREKGHIATRDIE 127

Query: 118 ---DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME------------- 161
              D  KG +     ++        E   G + +   A + P + ++             
Sbjct: 128 QMYDPAKGLFLADRFIKGTCPKCRTEDQYGDNCEACGATYTPAELIDPVSAISGATPEVR 187

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
               YFF+L  + D +  +  + H   + P + RN+++ + +SG  +  +SR    +G +
Sbjct: 188 SSTHYFFKLPDFADFMHEWINDGH---VQP-QIRNKLLEWFESGFNEWDISRDAPYFGFE 243

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   YL +   L + +G     +W +D      H IGKDI+ FHA+
Sbjct: 244 IPDAPGKYFYVWLDAPIGYLASFKNLCDREGIDFDAYWNSDSEAEVYHFIGKDIVYFHAL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A +  P  V  HGF+   G K+SKS G  I      E +  + LRY+   ++
Sbjct: 304 FWPAMLHGAGMRTPTAVNCHGFVTVNGAKMSKSRGTFIKAATYAEHLNPEYLRYYFAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             G D    + +   +RVN+DL   + N+ SR    I K   G +    A  +     ++
Sbjct: 364 TAGVDDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFIKKLGGGKLSAHCAEPQRLARFIA 423

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL---Y 449
                  EI E+ + +   RA+ +++ L  E + Y    +PW L K    R   VL    
Sbjct: 424 AGD----EIAEHYEAREFGRAMRRIMELADEANTYIAEAEPWVLAKQE-GREQEVLDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLA 470
           V + + RQL + L   VP +A
Sbjct: 479 VGINLFRQLMVYLAPVVPSMA 499


>gi|110639074|ref|YP_679283.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163345|sp|Q11RM3|SYM_CYTH3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110281755|gb|ABG59941.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 689

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 236/513 (46%), Gaps = 47/513 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   HIGH A   + AD+ ARF R  G +VLF  G+DEHG  I   A+  GV
Sbjct: 10  ITSALPYANGPVHIGHLAGVYVPADIYARFLRSKGENVLFIGGSDEHGVPITIRAKKEGV 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     +   + L IS+D + RT+ K H +T    +KK+ + G   +     +
Sbjct: 70  TPQQVVDKYHVQIKQSFEELGISFDIYSRTSSKIHAETSSEYFKKLYEDGKFIEQTSEQY 129

Query: 128 YSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEEEG------ 164
           Y  + E +  D                 D+  K       +   NP   +  E       
Sbjct: 130 YDPKAEQFLADRYIIGTCPKCGNENAYGDQCEKCGSTLSPSELINPRSTLSGEKPVMKST 189

Query: 165 --YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             +F  L  Y+  L  +  E H  +   +    +  S++  GL+  +++R   DWG+ +P
Sbjct: 190 KHWFLPLDQYEPWLKQWILEDHKNWKTNV--YGQCKSWLDQGLQPRAVTRD-LDWGVPVP 246

Query: 222 --DDPQYIMYVWIDALTNYLTTTG-YLDNPD-------GSKAKFWPAD----LHVIGKDI 267
                  ++YVW DA   Y++    Y  N +        +   FW  D    +H IGKD 
Sbjct: 247 VAGAEGKVLYVWFDAPIGYISAAKDYFKNSEIKAVHKNNTWEDFWKKDDTKLVHFIGKDN 306

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +EE     D 
Sbjct: 307 IVFHCIIFPAMLKAEGSYILPDNVPANEFMNLEGDKISTSRNWAVWLHEYLEEFKGKQDV 366

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN V+R++ +  K YD +IP  G   
Sbjct: 367 LRYALCANAPETKDNDFTWRDFQARNNNELVAIYGNFVNRALVLTHKYYDSVIPALGKLE 426

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            SDE ++ +      +I  +++      AL  ++ L    ++Y    +PW++ K NP+R 
Sbjct: 427 ASDEGVIMMLKEFPAKIAASIEQYRFREALGFMMDLARLGNKYLADTEPWKIYKENPERV 486

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            T+L++ +++   LAI+ + F+P  + K+F +L
Sbjct: 487 KTILHIGLQIAANLAIVSEPFIPFTSAKLFTML 519


>gi|309797413|ref|ZP_07691806.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|308119037|gb|EFO56299.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 655

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 224/488 (45%), Gaps = 45/488 (9%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH  E I ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +
Sbjct: 1   LGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQ 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 +ISYD++  T  + +     +++ ++ + G I     S  Y   ++  +  D  
Sbjct: 61  TDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYD-PEKGMFLPDRF 119

Query: 142 YKG------ADGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDK 175
            KG      A  QY        A ++P + +E               E +FF L ++ + 
Sbjct: 120 VKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEM 179

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L ++  S     L  +  N++  + +SGL+   +SR    +G +IP+ P    YVW+DA 
Sbjct: 180 LQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAP 236

Query: 236 TNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLP 287
             Y+ +   L +  G    F   W  D      H IGKDI+ FH+++WPA L  +N   P
Sbjct: 237 IGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKP 296

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGL 346
             +F HG++   G K+SKS G  I     +     D+LRY+   +++   D    + +  
Sbjct: 297 TNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDF 356

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +RVNAD+ N + NL SR+   I K +DG++    A   +D  +    +   + I E  +
Sbjct: 357 VQRVNADIVNKVVNLASRNAGFINKRFDGVL----AGELADPQLYKTFTDAAEVIGEAWE 412

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQA 464
           ++   +A+ ++++L    +RY D Q PW + K     A    +  + + + R L   L+ 
Sbjct: 413 SREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKP 472

Query: 465 FVPKLANK 472
            +PKL  +
Sbjct: 473 VLPKLTER 480


>gi|149378169|ref|ZP_01895886.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357531|gb|EDM46036.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 677

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 227/503 (45%), Gaps = 42/503 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+  R+ ++ G +  +    D HG  I   
Sbjct: 7   KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRYQKMRGQNCYYVCADDAHGTAIMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++++  +D+     +       I +D++  T  + +      +++++ + G I  
Sbjct: 67  AEREGISSESLIDRIRDEHQQDFGGFHIRFDNYYTTHSEENRQFSEYIYRQLQENGHIAT 126

Query: 122 GCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM---------- 160
              +  +      +  D            E   G + +   A + P + +          
Sbjct: 127 RKITQAFDPEKNMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 186

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFFRL  + D L ++  S     L  +  N++  ++ +GL++  +SR    +
Sbjct: 187 PVDKESEHYFFRLPEFADFLANWTRSG---TLQPQVANKLAEWLDAGLQEWDISRDAPYF 243

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   YL +   L N +G     FW AD      H IGKDI+ F
Sbjct: 244 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKADSTAEVYHFIGKDIINF 303

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L SA    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 304 HALFWPSMLHSAGFRTPSAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLDPEYLRYYFA 363

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    D    + +    RVN+DL   + N+ SRS   I K +DG +   G  TE ++ 
Sbjct: 364 AKLTGSVDDMDLNLEDFAARVNSDLVGKVVNIASRSAGFITKRFDGQL---GTVTEHEK- 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
            L        EI +  + +   RA+ +++ L    ++Y + ++PW + K +   D    +
Sbjct: 420 -LKEFIEAGDEIADFFEAREFGRAMRRIMELADIANQYVNDEQPWVIAKQDGQDDNLQAI 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLA 470
               + +   L   L   +P+ A
Sbjct: 479 CTNAINMFHLLMTYLAPVLPETA 501


>gi|269219273|ref|ZP_06163127.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211420|gb|EEZ77760.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 604

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 239/527 (45%), Gaps = 66/527 (12%)

Query: 8   YISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA+ 
Sbjct: 5   HILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMRGEDVLMVSGTDEHGTPILVAAEA 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG------- 117
            G T K   D+N+R   +    L +SYD F RTT   H    + +++   D G       
Sbjct: 65  EGKTPKQLADENNRIIVEDLVALGLSYDLFTRTTSVNHEHVVQSMFEVCRDNGYMIVQQQ 124

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHN---------PVQWMEEEG-- 164
           ++     +G  +L D        +   +GA G   +   N         PV  +  +   
Sbjct: 125 NVAIDPVTG-NTLPDRYIEGTCPICGSEGARGDQCDVCGNQLDPQDLIDPVSKVSGQAPR 183

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216
                 YF  + A  +KL  + +   +     E R  VI F K  L+D+     T D  W
Sbjct: 184 FEVTDHYFLDVPALAEKLGEWLD---DVEATGEWRPNVIVFSKHLLEDVRPRAMTRDISW 240

Query: 217 GIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--------FW--PADL--H 261
           GI +P   D P   +YVW DA+  YL+ +        +  K        +W  P  L  +
Sbjct: 241 GIPVPGWEDQPNKRLYVWFDAVIGYLSASVEWARRRAAAGKGTAEDWRKWWNDPEALSYY 300

Query: 262 VIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSL 307
            +GKD + FH+  WPA LL+ N              L LP +V +  F+  +G+K S S 
Sbjct: 301 FMGKDNIVFHSQIWPAELLAYNGEGSRGGEPGKLGRLNLPTQVVASEFLTMEGKKFSSSK 360

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             VI   +V+     DALRYF+        D  +      +R N++L  G GNLV+R+ +
Sbjct: 361 NVVIYVRDVLSRYQPDALRYFISIAGPESSDADFTWAEFVRRNNSELVAGWGNLVNRTAA 420

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           MI K++ G IPTPG   E D  +L         + E++ N     AL +++ LV E + Y
Sbjct: 421 MIAKNF-GEIPTPGQPEEVDAELLDAVRNGFATVGESIANHGQRAALTEIMRLVGEANAY 479

Query: 428 FDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               +P++LK     +R +TVL+   + +  L  ++  F+P  +N I
Sbjct: 480 VAKTEPFKLKAPEQRERLATVLHTLAQAVWDLNTMMSVFLPHSSNAI 526


>gi|307245178|ref|ZP_07527269.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307254125|ref|ZP_07535970.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258589|ref|ZP_07540324.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306853822|gb|EFM86036.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306862825|gb|EFM94774.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867246|gb|EFM99099.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 675

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHIADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160
            +    + +  D  V KG      A+ QY +      + ++P+  +              
Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  I
Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L + +G    +FW  D      H IGKDI+ FH+++
Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ + 
Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADQLEDEALFAE 412

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  + 
Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMG 472

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +P+LA +
Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493


>gi|307260824|ref|ZP_07542510.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306869391|gb|EFN01182.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 675

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHIADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160
            +    + +  D  V KG      A+ QY +      + ++P+  +              
Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  I
Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L + +G    +FW  D      H IGKDI+ FH+++
Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ + 
Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADQLEDEALFAE 412

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  + 
Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMG 472

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +P+LA +
Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493


>gi|190149626|ref|YP_001968151.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|303252595|ref|ZP_07338758.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|226710890|sp|B3H0J7|SYM_ACTP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189914757|gb|ACE61009.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302648563|gb|EFL78756.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
          Length = 682

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 235/502 (46%), Gaps = 43/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   
Sbjct: 4   KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S
Sbjct: 64  GITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160
             +    + +  D  V KG      A+ QY +      + ++P+  +             
Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            +E+ R L   L+  +P+LA +
Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497


>gi|206978214|ref|ZP_03239094.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206743573|gb|EDZ55000.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 544

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E+  +      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y 
Sbjct: 418 ----EGLYKHVGEAIEKTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I     LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFVNLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|66047113|ref|YP_236954.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500945|sp|Q4ZPK6|SYM_PSEU2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|63257820|gb|AAY38916.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Pseudomonas syringae pv. syringae
           B728a]
          Length = 682

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VEFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAELRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLTAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|217962514|ref|YP_002341086.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229142350|ref|ZP_04270869.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|226695275|sp|B7HVW2|SYM_BACC7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|217064569|gb|ACJ78819.1| putative methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228641120|gb|EEK97432.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 544

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E+  +      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFLYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I     LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFVNLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|270284514|ref|ZP_05966259.2| methionine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277051|gb|EFA22905.1| methionine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 620

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 238/527 (45%), Gaps = 64/527 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   IMVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124
           GVT +   D+ +R   +    L +SYD F RTT K H    + L+++    G IYK    
Sbjct: 64  GVTAQELADRYNRVIVNDLCNLGLSYDLFTRTTTKNHEHVVQELFRQCLKNGYIYKDTQK 123

Query: 125 -----SGWYSLRDEAYYNDDEV--YKGADGQYYNAQHN---------PVQ--------WM 160
                S   +L D     +  +   +GA G   +A  N         PV         + 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHTQGARGDQCDACGNELDPDELINPVSKINGETPIFQ 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           + E YF  L A ++    + E    +      R  VI+F +  +KD+     T   DWGI
Sbjct: 184 DSEHYFLDLPALKEANEQWLEGRTGW------RTGVINFSRGLMKDVKPRAITRDIDWGI 237

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW----PADLHVIGKD 266
            IP     D+P   +YVW DA+  YL+ +       G      ++W        + +GKD
Sbjct: 238 PIPVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRKGDPELWREWWNDPSTPGYYFLGKD 297

Query: 267 ILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WP+ +L+ N              L +P++V +  F+  +G K S S G VI 
Sbjct: 298 NITFHSQIWPSEILAYNGEGDKGGEPGELGKLNMPEQVVASEFMTMEGRKFSSSRGIVIY 357

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +++ +  VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K+
Sbjct: 358 VKDILAKYPVDAVRYYISVAGPENSDSDFTWSEFVRHNNEELAASWGNLVNRVANLMHKN 417

Query: 373 YDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           + G +P       TE D+++L   +     +   +       AL + + LV ++++Y  A
Sbjct: 418 F-GEVPAMFESEMTEQDQALLDEAADAFDTVGALLDQHHQKNALNEAMRLVGDINKYISA 476

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +PW++K  NP R  TVL+V  + +     LL  F+P  A  +++ L
Sbjct: 477 TEPWKIKD-NPKRLGTVLHVAAQAVSDANHLLAPFLPHSAQLVWEAL 522


>gi|330508605|ref|YP_004385033.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328929413|gb|AEB69215.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 668

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 235/497 (47%), Gaps = 40/497 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N   H+GH    + AD+  R  R  G +VLF  G+D HG  I   A+  G
Sbjct: 3   ILVTCGLPYANGPCHLGHLRTYVPADIFVRGLRKMGKEVLFVCGSDSHGTPIVVNAEAQG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K    +  ++F ++   ++I +D F  T +   H+  + + + + + G +Y      
Sbjct: 63  MTPKALSIKYHQHFDEIFQGMEIDFDFFGDTDDPACHNRTKEMVEALMENGYVYPREIDL 122

Query: 127 WYSLRDEAYYND----------------DEVYKGAD-----GQYYNA----QHNPVQWME 161
            Y  + E +  D                DE   G       G+  NA         ++ +
Sbjct: 123 AYCPKCERFLPDRYVEGECPYCGKPARGDECDMGCGRHLEPGEIKNAICKVCGGRAEYRK 182

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +  YFFRLS ++D LL + ++          RN    +V+S LKD  ++R    WG++ P
Sbjct: 183 QTHYFFRLSGFRDFLLEHLQT---LGGTASARNYATEWVRSELKDWCITR-NMAWGVRFP 238

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW--PADL-HVIGKDILRFHAIYWPA 277
                ++YVW+DA   Y+  T       G   + +W  P+ + H IG DI+  H I+WPA
Sbjct: 239 GSDDLVVYVWVDAPIGYIAFTEEWCARSGRDWEDYWKKPSQIIHFIGGDIVYHHCIFWPA 298

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
            L  A   LP  V + G +    +K SKS GNVI   +   + G+  D LRY+L    A 
Sbjct: 299 MLKGAGYTLPSAVVASGMLKIDDKKFSKSRGNVIWVKDDYMDRGLHPDLLRYYLASYTAH 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  +  +    +VN++L    GN ++R+++  +K+++G +P      + D  +L+   
Sbjct: 359 NKEVNFAWNIFADKVNSELVGAFGNFINRALTFSVKNFEGKVPE----GKIDADVLARIE 414

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + E+   ++     +A   V++L    + YF + +PW+L K++ D A +VL   +++ 
Sbjct: 415 ETMAEVVSGLEEYEFKKATDSVMTLADYGNTYFQSHEPWKLVKSDKDAAGSVLRSCLQIA 474

Query: 456 RQLAILLQAFVP-KLAN 471
           + L IL++  +P K+ N
Sbjct: 475 KALVILMEPVMPAKMQN 491


>gi|304397467|ref|ZP_07379345.1| methionyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355085|gb|EFM19454.1| methionyl-tRNA synthetase [Pantoea sp. aB]
          Length = 677

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 233/505 (46%), Gaps = 46/505 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+   ++  +  S +  D A   ++SYD++  T    + +   +++ ++ + G I    
Sbjct: 66  LGIAPEQMIAEMKSEHEADFAG-FNVSYDNYHSTHGDENRELSALIYGRLKENGFIKNRT 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME---------- 161
            S  Y   ++  +  D   KG             + +  +A ++P + ++          
Sbjct: 125 ISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATP 183

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L ++   L ++  S     L  +  N++  + +SGL+   +SR    +G
Sbjct: 184 VLRDSEHFFFDLPSFSAMLQAWTRSGA---LQDQVANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWRKDSTTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D+LRY+  
Sbjct: 301 HSLFWPAMLEGSNFRKPNNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYA 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D +
Sbjct: 361 AKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKL----AAELADPA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +        ++I +    +   RA+ ++++L    +RY D Q PW + K     A    +
Sbjct: 417 LYQTFVDASEKIGDAWAAREYSRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +P L+ +
Sbjct: 477 CSMGINLFRILMTWLKPVLPSLSAR 501


>gi|253998809|ref|YP_003050872.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253985488|gb|ACT50345.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 678

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 235/512 (45%), Gaps = 47/512 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+  
Sbjct: 7   KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + + ++ ++ D +  L + +D++  T    + +    ++ ++   G I     
Sbjct: 67  GITPEQLIAKVHTEHYADFSGFL-VEFDNYYSTNAPENRELASNIYLELKKNGKIATKTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------------ 160
             ++    + +   D   KG      A  QY ++       ++P + +            
Sbjct: 126 EQFFDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTELINPYSAVSGAAPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+LS   + L  +  S     L  E  N++  +  SGL D  +SR    +G 
Sbjct: 185 RKETEHYFFKLSECGEFLQQWTRSG---TLQAEAANKMGEWFASGLSDWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   Y+ +   L +  G    ++W AD      H IGKDIL FHA
Sbjct: 242 EIPDAPGKYFYVWLDAPIGYMASFKNLCSRLGLDFDEYWKADSKTELYHFIGKDILYFHA 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331
           ++WPA L  +    P ++F+HGF+   GEK+SKS G  I     ++ V   + LRY+   
Sbjct: 302 LFWPATLKYSGHRQPTQIFAHGFLTVNGEKMSKSRGTFITAGSYLQHVKNPEYLRYYYAA 361

Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D   + D    RVN+DL     N+ SR+   I K +DG +        +D ++
Sbjct: 362 KLNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLA-----ALADNAV 416

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
           ++   +    I E    +   RAL ++++L  + + Y     PW++ K     A    V 
Sbjct: 417 ITELRQAASSIAECYNTRDYGRALREIMALADKANGYVAEHAPWDMAKQAGREAELHQVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +E+ R L + L+  +PKLA +I   L +A
Sbjct: 477 TAALEMFRLLTLYLKPVLPKLAGQIEAFLNIA 508


>gi|290473994|ref|YP_003466868.1| methionine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289173301|emb|CBJ80076.1| methionine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 675

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 231/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+HR+ G +V F    D HG  I   AQ +
Sbjct: 7   KLLVTCALPYANGPIHLGHILEHIQADIWVRYHRMRGKEVHFICADDAHGTPIMLKAQQS 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  + + S   +       ISYD++  T  + + +    ++ K+   G I     S
Sbjct: 67  GISPEEMIAKVSLEHQQDFAGFAISYDNYHSTHSEENKELASQIYLKLKKNGYIKSRKIS 126

Query: 126 GWYSLRDEAYYNDDEVYKGA------DGQY------YNAQHNPVQWM------------- 160
             Y   ++  +  D   KGA      + QY          ++P + +             
Sbjct: 127 QLYD-PEKGMFLPDRFVKGACPKCKAEDQYGDNCEVCGTTYSPTELINPRSAVSGATPEM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  + D L  +  S     L  +  N++  +  +GL+   ++R    +G +
Sbjct: 186 RDTEHFFFDLPVFSDMLQKWTRSGS---LQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IPD+P    YVW+DA   Y+ +   L +   D +  +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDEPGKFFYVWLDAPIGYMGSFQNLCSKRDDLNFDEFWSKDSEADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG+I   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNYRKPTNLFVHGYITVNGTKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFAGKL----ADQLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                  + I E+  ++   +A+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 QQFVDAAEGIAEDFTHREFSKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P L ++
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTDR 501


>gi|206970493|ref|ZP_03231446.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206735070|gb|EDZ52239.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 544

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 239/514 (46%), Gaps = 47/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q K+    E   E       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQQKIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + F
Sbjct: 239 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G++P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 VGGLYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             V +I   A LL+ F+P  + ++ + L + + N
Sbjct: 473 NCVYLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506


>gi|114563417|ref|YP_750930.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299549|sp|Q081H3|SYM_SHEFN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114334710|gb|ABI72092.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 683

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 242/543 (44%), Gaps = 59/543 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   
Sbjct: 3   KSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AQ  G+T +  + Q  +   +D AD  +I +D+F  T  + +      ++ K+ D G I 
Sbjct: 63  AQQMGITPEEMIAQVQKEHQQDFAD-FNIQFDNFHSTHSEENRILASDIYLKLRDGGYIK 121

Query: 121 KGCYSGWY------------------SLRDEAYYNDDEVYKGA--------DGQYYNAQH 154
               S  Y                    + E  Y D+    GA        + +   +  
Sbjct: 122 TKTISQLYDPEKLMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLINPKSAVSGA 181

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   + E +FF L A++  L  + +S     L  E  N++  + + GLK   +SR   
Sbjct: 182 TPIM-KDTEHFFFDLPAFEGMLKEWIQSGS---LQQEMANKLNEWFEQGLKQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L +   D +   FW  D      H IGKDI
Sbjct: 238 YFGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSLDSTAEVYHFIGKDI 297

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A +  P  V++HG++   G K+SKS G  I     ++ +  + LRY
Sbjct: 298 VYFHSLFWPAMLEGAGIRKPTSVYAHGYVTVNGSKMSKSKGTFIKARTYLDNLDPEYLRY 357

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++    D    + +   +RVN+DL   + NL SR+   I K +DG +      + +
Sbjct: 358 YYAAKLNSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKVTDSSLT 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           D  I    S V+ E+ E  +     +A+ ++++L    + Y     PW+L K +   D A
Sbjct: 418 D--IFLAKSEVIAELYETRE---FGKAMREIMALADIANAYVADAAPWQLVKQDDKQDEA 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQR 492
             V    + + R L   L+  +PKLA  +   L                E   F++L QR
Sbjct: 473 HQVCSNALNLFRILVTYLKPVLPKLAENVEGFLQLTLTWDNLGQDLAGHEIATFKALMQR 532

Query: 493 LKP 495
           ++P
Sbjct: 533 IEP 535


>gi|197336022|ref|YP_002156576.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226710937|sp|B5FG53|SYM_VIBFM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|197317512|gb|ACH66959.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 686

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 234/541 (43%), Gaps = 62/541 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G DV F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S
Sbjct: 67  GISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158
             +    E +  D  V KG      A+ QY +   N                     PV 
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEEQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L N   D +  ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGETNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVN+D+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFAEPELYNEF 421

Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 422 IAAADRIAELYETRE------FGRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRLK 494
           V  V + + R L   L+  +P+LA +    L             VA E   F++L  R+ 
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLNETLTWEGVAQPLVAHEITKFKALFARID 535

Query: 495 P 495
           P
Sbjct: 536 P 536


>gi|149918382|ref|ZP_01906873.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820908|gb|EDM80317.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 600

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 225/513 (43%), Gaps = 44/513 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I  DV  R  ++ G  V+F   +D HG  +   A+ 
Sbjct: 3   KKVLVTAALPYANGSIHLGHMLEAIQTDVYVRARKMGGERVVFMWASDTHGTPVQVRARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +         D   I YD F  T    + +    +++ +  +GDI     
Sbjct: 63  EGIEPEALIAKAYEEHVAAYDGFGIGYDIFHTTHSDENREHAGAIFEALRARGDIEVREV 122

Query: 125 SGWYSLRDEAYYNDD------EVYKGADGQY------YNAQHNPVQWME----------- 161
              YS  D+ +  D        V K  D QY        A + P + ++           
Sbjct: 123 EQLYSEVDQMFLPDRLVKGTCPVCKTPD-QYGDSCDNCGATYRPTELIDPYSSVSGDKPV 181

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPE---FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               E  F  LS +++ L  + +   E    +L    R  V+ +V  GL+D  +SR+   
Sbjct: 182 LRTSEHLFVPLSRHEEFLREWLKPVSEGGSTVLQDSVRRFVMDWVDKGLRDWDISREAPY 241

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD--------LHVIGK 265
           +GI+IP  P    YVW DA   Y+  T        D S   +W A         +HVIGK
Sbjct: 242 FGIEIPGFPGKYFYVWFDAPIGYIAATDKWCQGKDDESVEGWWKAGAGEDGTEIVHVIGK 301

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FH ++WPA L ++   +P +V +HG++   GEK+SKS G  I     +E V    L
Sbjct: 302 DIVYFHCLFWPAMLNASGYTVPSRVHAHGWLKVNGEKMSKSRGTFILANTYLEHVDPAYL 361

Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+L   +   +D F    +    RVNADL N   NL SRS+  +     G   T G  T
Sbjct: 362 RYYLAARLGNNQDDFDLAMEDFVNRVNADLVNKAANLASRSIKFLHAKLGG---TTGPLT 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E  ++++         +     +     AL   I +    + YF  Q+PW+  K++P+ A
Sbjct: 419 EEGQALVDDARATFAAVPGLYADFDSAAALRVAIEMAEACNNYFSEQEPWKKVKSDPEAA 478

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V+   V+V + +  +L+  +P+   K+  +L
Sbjct: 479 RAVVSAGVQVSKLIGAILKPVLPEWGAKVERML 511


>gi|330997427|ref|ZP_08321278.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570801|gb|EGG52517.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 679

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 244/517 (47%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+  +  +D  +   IS+D + RTT + H +T    ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHKIIKDSFEEFGISFDVYGRTTSEVHCETASEFFRTLYDKGEFV 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y      +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKS----GLKDLSL 209
            PV   E + ++  L  ++  L  +  E H E+      RN V    KS    GL+  ++
Sbjct: 183 KPVM-RETKHWYLPLDKHEAWLRQWILEDHKEW------RNNVYGQCKSWLDMGLQPRAV 235

Query: 210 SRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVI 263
           SR   DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H I
Sbjct: 236 SRD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLRDFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K YDG++P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTQKYYDGVVPAC 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  TE D   L     V  ++ E +       A  + ++L    ++Y    +PW++ KT+
Sbjct: 413 GELTEYDRQTLDEFKDVKAKVEELLDAFKFRDAQKEAMNLARIGNKYIADSEPWKVVKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P+R  TV+Y+++++   LAI  + F+P  + K+  +L
Sbjct: 473 PERVKTVIYISLQLTANLAIAFEPFLPFSSEKLRKML 509


>gi|288916473|ref|ZP_06410850.1| methionyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288352073|gb|EFC86273.1| methionyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 562

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 234/514 (45%), Gaps = 48/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N QPH+GH A   + AD+ AR+ R+ G  VL  +G+D HG  I   A   
Sbjct: 17  VLVAVAWPYANGQPHLGHIAGAYLPADIFARYQRMIGNRVLMVSGSDAHGTPITVRADEE 76

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +  VD+    F  +   L IS+D F  T    H    + ++ ++ + G IY    S
Sbjct: 77  GVTPQAIVDRYHPEFLRIWSDLAISFDLFTTTRTHNHEVVAQSVFTRLREAGYIYPKETS 136

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH---------------NPVQWME 161
            ++      +  D  V        Y  A G Q  N                    V  M 
Sbjct: 137 QFFDPDAGRFLPDRYVVGTCPHCSYTQARGDQCENCGRTLDPELLVDPRSKVTGAVPEMR 196

Query: 162 EEGYFF-RLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWG 217
           +  +FF RLS   D+LL + ++   +     RR   N  + FVK GL D +++R   DWG
Sbjct: 197 QTTHFFLRLSGLSDQLLDWLQTRQGW-----RRHVLNWSVQFVKDGLHDRAITRD-LDWG 250

Query: 218 IKIPDD---PQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKD 266
           + +P D   P   +YVW +A+  YL+ +        +P+  +A +W     A  + +GKD
Sbjct: 251 VPLPTDELGPGKRLYVWFEAVIGYLSASKEWAAGTGDPEAWRA-WWEDPEAAAYYFVGKD 309

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            + FH + WPA LL    L LP  V ++ ++   G K SKS G      E ++ +  DAL
Sbjct: 310 NIPFHTVIWPAMLLGHGGLDLPTDVPANQYVTFGGAKASKSAGIGRGVREYLDLLQPDAL 369

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ L   +    D       + +RVN +L    GNLV+R ++ I K + G +P  G    
Sbjct: 370 RFALASVLPEQNDTEISDADIVRRVNDELIANWGNLVNRVMAQINKFFGGALPETGDLDG 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
               +L+     L  + E ++   +  AL   + + +EV+ Y   ++PW+  K +   A+
Sbjct: 430 VHAELLASVDAGLVRVGELLERVELRAALRAAMEISAEVNAYLYREEPWKTVKVDKATAA 489

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             L V V+ I  +   L  F+P  + ++ ++L +
Sbjct: 490 HSLAVAVQAISGITTALAPFLPFSSARVAEVLGI 523


>gi|167854961|ref|ZP_02477736.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853918|gb|EDS25157.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 684

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 242/505 (47%), Gaps = 45/505 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAD 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  +++  + +  D A   +IS+D++  T  + + +    ++KK+   G I   
Sbjct: 65  KLGITPEQLIEKAKADHIADFAG-FNISFDNYHSTHSEENREYTSAIYKKLKANGFIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM---------- 160
             S  +      +  D  V KG      A+ QY +      + ++P+  +          
Sbjct: 124 VISQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGST 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L ++++ L ++  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVVKQSEHFFFDLPSFEEMLKAWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IPD      YVW+DA   Y+ +   L +  G     FW  +      H IGKDI+ F
Sbjct: 240 GFEIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLNFDDFWKKESDAELYHFIGKDIVYF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF+HG++   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 300 HSLFWPAMLEGSEYRKPTNVFAHGYVTVDGQKMSKSRGTFIQASTYLKHIDPECLRYYYA 359

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    +D  ++ +   +RVN+D+ N + NL SR+   I K ++G +    A T  +++
Sbjct: 360 AKLNDRIEDLDFNLEDFVQRVNSDIVNKLVNLASRTAGFITKRFEGKL----ASTLENQA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +        ++I    + +  ++A+ ++++L  + ++Y D + PW + K     A    V
Sbjct: 416 LFDEFVAQSEQIATYFETREYNKAIREIMALTDKANKYIDDKAPWVIAKEEGKDAELQAV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + +E+ R L   L+  +PKLA +
Sbjct: 476 CSMGLELFRVLMSYLKPVLPKLAER 500


>gi|229076419|ref|ZP_04209383.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228706706|gb|EEL58915.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 544

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 239/514 (46%), Gaps = 47/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q+++    E   +       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPVGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWIPDILESYDPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K YDG++P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGVVPKGTIHVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + +E+   ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y
Sbjct: 417 V----EGLYKEVGAAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDNPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             V +I   A LL+ F+P  + ++ + L + + N
Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRNTLSIVNRN 506


>gi|167044646|gb|ABZ09318.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG7F19]
          Length = 551

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 256/542 (47%), Gaps = 49/542 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N + HIGH A   + ADV  RF +  G++  +   +D+ G  I   ++ 
Sbjct: 4   KAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPILIQSEK 63

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G T + +V+  N R+F D     +I +D F +T+   +    + ++KK+   G IY+  
Sbjct: 64  EGKTPEEYVEYWNKRDFEDFV-AFNIKFDFFYKTSSPENRQFVQDVFKKLEQAGHIYQNE 122

Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQYYN-------------------AQHNPVQW 159
               Y   D+ +  D  V     Y  AD QY +                       PV+ 
Sbjct: 123 IIQLYCNTDKKFLPDRYVVGTCPYCKADEQYSDLCEKCGRVPEEIENPHCSICGQTPVK- 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + + YFF+L  + DK+  Y   +    L  + +  V +++K GL D  ++R    WGI 
Sbjct: 182 KKTKHYFFKLKNFSDKISQYLNDNKN--LQKDVKKYVQNWIKDGLTDWDITR-DISWGIP 238

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FW-PADL-HVIGKDILRFHAIY 274
           IPD    Q + Y W D    Y+++T    N +G   K FW  +D+ H IGKDI+  H ++
Sbjct: 239 IPDGGANQKVFYGWFDNHLAYISSTIKFLNGNGKDGKKFWNESDIYHFIGKDIVYHHYLF 298

Query: 275 WPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            PA  L       LP  + + G +  + +KISKS    I   + +     D LR++L+  
Sbjct: 299 LPAIRLGIEEEYKLPDYIPTRGHLTLQSKKISKSRNWYIGLKDFLAIFPADYLRFYLISI 358

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               +D   ++      ++N++L   +GNLV+R++   +K ++G +P P  F + D    
Sbjct: 359 NPYSQDDLNFNWGEFATKINSELIGNLGNLVNRALGFTVKSFNGAVPGPDEFDDIDNESK 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + + ++  +   M+   + RAL +++   +  ++YF  ++PW+    N    +T ++++
Sbjct: 419 KMINELVSHLGILMEENHLDRALKKILQFSAHFNQYFQHKEPWK----NGPGTNTCVFLS 474

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ----RLKPGFMLHKTFDPIF 507
           V  IR LAI +  F+P+ + KI+ +    D N   Q  D+     LK G  L  +  P+F
Sbjct: 475 VNAIRSLAIAVYPFLPESSQKIW-LQLGLDGNVSAQMFDEISNITLKQGHKL-GSVSPLF 532

Query: 508 PR 509
            +
Sbjct: 533 EK 534


>gi|75760133|ref|ZP_00740193.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228903536|ref|ZP_04067659.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|74492370|gb|EAO55526.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228856112|gb|EEN00649.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 544

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 238/514 (46%), Gaps = 47/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++    E   E       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQQQIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+  Y + + Y     G    +FW +D    +V GKD + F
Sbjct: 239 PIPVKGYEDKK--IYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K YDG++P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y
Sbjct: 417 V----EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             + +I   A LL+ F+P  + ++   L + + N
Sbjct: 473 NCIYLIANFANLLEPFLPFSSERVRSTLSIVNRN 506


>gi|152979488|ref|YP_001345117.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|187645703|sp|A6VQD5|SYM_ACTSZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150841211|gb|ABR75182.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 685

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 234/507 (46%), Gaps = 45/507 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   
Sbjct: 3   KANRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGHEIYFVCADDAHGTPIMLK 62

Query: 62  AQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A   G+   ++  D    ++ D     +IS+D++  T  + + +   +++ ++ + G I 
Sbjct: 63  ADQMGIAPEQLIADVQKSHYADFCG-FNISFDNYHSTHSEENREFSEMIYNRLKENGFIK 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160
               S  +   +++ +  D   KG      A+ QY       +A ++P + +        
Sbjct: 122 TRAISQLFD-PEKSMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELIAPRSVVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L +++  L  +  S     L  E  N++  +  +GL+   +SR   
Sbjct: 181 ATPIIKESEHFFFDLPSFEAMLKQWNRSGA---LQSEVANKMQEWFDAGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDIL 268
            +G KIP       YVW+DA   Y+ +   L N       +FW  D      H IGKDI+
Sbjct: 238 YFGFKIPGTENKYFYVWLDAPIGYMASFKNLCNRQNIDFDRFWNKDSQAELYHFIGKDIM 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGADLRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYY 357

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVN DL N + NL SR+   I K + G +    A    D
Sbjct: 358 YAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFAGKL----ADKLDD 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
           E++ +       +I    +N+   +A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFNEFIAQSAQIAAYYENREFGKAVREIMALTDKANKYVDEKAPWVIAKEQGRETELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            V  + +++ R L   L+  +PKLA +
Sbjct: 474 RVCSMGIQLFRVLMGYLKPVLPKLAER 500


>gi|301170011|emb|CBW29615.1| methionyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 682

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G   ++FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFSEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ D   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|237785129|ref|YP_002905834.1| methionyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259511557|sp|C4LHI6|SYM_CORK4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|237758041|gb|ACR17291.1| Methionyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 612

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 247/545 (45%), Gaps = 71/545 (13%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I T++A+P  N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A+  
Sbjct: 5   ILTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMRGRDVLMVSGTDEHGTPLLVQAEKE 64

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   D  N +   D+A  L +SYD F RTT + H+   + L+  +   G + K   
Sbjct: 65  GVSVQQLADTYNKQIVEDLAG-LGLSYDLFTRTTTRNHYAIVQELFTTLYSNGYMVKQTT 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  +          GA G   +   N +                 ++
Sbjct: 124 LGAISPSTGRTLPDRYIEGTCPICGAPGARGDQCDTCGNQLDPADLIDSVSKINGETPKF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E E +   L A  D L  + ES  ++      R  V+ F  + LKD+     T   DWG
Sbjct: 184 VETEHFLLDLPALADALGEWLESRQDW------RPNVLKFSLNILKDIKPRAMTRDIDWG 237

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIG 264
           + +P     D+    +YVW DA+  YL+ +      + +PD  K K+W        + +G
Sbjct: 238 VPVPLEGWADNKFKKLYVWFDAVVGYLSASIEWAHRIGDPDAWK-KWWTNPEAKSYYFMG 296

Query: 265 KDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA +L                +L LP +V S  ++   G K S S G V
Sbjct: 297 KDNITFHSQIWPAEMLGYRGLGSRGGTEGKLGDLQLPTEVVSSEYLTMSGSKFSSSKGVV 356

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G D LRYF+        D  +  D   +R N +LAN  GNL++R+VSM  
Sbjct: 357 IYVQDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRNNNELANSWGNLINRTVSMAA 416

Query: 371 KDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           K++ G +P       T+ D ++L +  +    + +N+++      + + + +V E + Y 
Sbjct: 417 KNF-GEVPDISGLELTDDDNALLDLAEKTFDIVADNIEHSRFRAGINEAMHVVGEANAYI 475

Query: 429 DAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            AQ+PW+L K     DR + VL+  ++V+    +LL  ++P  A K+ + L    E    
Sbjct: 476 AAQEPWKLAKDEDQRDRLAVVLHTALQVVSDCNVLLTPYLPHAAQKVHETLGRTGEWAAM 535

Query: 487 QSLDQ 491
             +D+
Sbjct: 536 PRIDE 540


>gi|23464786|ref|NP_695389.1| methionyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|25009342|sp|P59076|SYM_BIFLO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23325363|gb|AAN24025.1| methionyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 621

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 246/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +   +GA G   +A  N         PV        ++
Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            + E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWG
Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPACPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  
Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 476 ATEPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522


>gi|189440393|ref|YP_001955474.1| methionyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|312133725|ref|YP_004001064.1| metg [Bifidobacterium longum subsp. longum BBMN68]
 gi|189428828|gb|ACD98976.1| Methyonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|311773001|gb|ADQ02489.1| MetG [Bifidobacterium longum subsp. longum BBMN68]
          Length = 617

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 244/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 2   VNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 61

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG    
Sbjct: 62  TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 120

Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161
               S   +L D     +  +   +GA G   +A  N         PV        ++ +
Sbjct: 121 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWGI 
Sbjct: 181 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 234

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GKD 
Sbjct: 235 VPVKDWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 294

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 295 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 354

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++
Sbjct: 355 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 414

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  A 
Sbjct: 415 -GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 473

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K     R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 474 EPWKIKDDQA-RLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 518


>gi|329297896|ref|ZP_08255232.1| methionyl-tRNA synthetase [Plautia stali symbiont]
          Length = 677

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVFFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         +ISYD++  T    +     +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++   L ++  S     L  +  N++  + ++GL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSAMLQAWTRSGA---LQEQVANKMQEWFEAGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +I   P   +YVW+DA   Y+ +   L +  G     +FW  +      H IGKDI+ FH
Sbjct: 242 EILGAPGKYLYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWKKNSSTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K ++G + +  A    D+++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFNGQLASELA----DQAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                   ++I E   ++  +RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFVDASEKIGEAWASREYNRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 478 SMGINLFRVLMTWLKPVLPSLSER 501


>gi|229199184|ref|ZP_04325865.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228584290|gb|EEK42427.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 544

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 248/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETIQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E+  +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVENAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRALKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|238919212|ref|YP_002932727.1| methionyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868781|gb|ACR68492.1| methionyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 682

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 231/508 (45%), Gaps = 54/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 12  KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + + S+   +D AD   ISYD++  T  + +H    +++ ++ + G I     
Sbjct: 72  GIAPEQMIAEVSKEHQQDFAD-FQISYDNYHSTHSEENHQLASLIYTRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPI 189

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L ++   L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 190 LRESEHFFFDLPSFGAMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-------TGYLDNPD----GSKAKFWPADLHVIGKDI 267
           +IPD P    YVW+DA   Y+ +        G L+  D    GS A+ +    H IGKDI
Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFRNLCDKRGDLNFDDYWGQGSDAELY----HFIGKDI 302

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  D LRY
Sbjct: 303 VYFHSLFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRY 362

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   D    + +   +RVNAD+ N + NL SR+   I K + G +      T +
Sbjct: 363 YYTAKLSDRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFAGQLSD----TLA 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444
           D ++         EI +  + +   +A+ ++++L    +RY D Q PW + K     A  
Sbjct: 419 DPALYQTFVDAAAEIAKAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADL 478

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472
             +  + + + R L   L+  +P L+ +
Sbjct: 479 QAICSMGLNLFRVLMTYLKPVLPALSAR 506


>gi|227546913|ref|ZP_03976962.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227212593|gb|EEI80481.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 621

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 245/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +   +GA G   +A  N         PV        ++
Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            + E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWG
Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVKDWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  
Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K     R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 476 ATEPWKIKDDQA-RLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522


>gi|115378722|ref|ZP_01465869.1| hypothetical protein STIAU_7318 [Stigmatella aurantiaca DW4/3-1]
 gi|115364272|gb|EAU63360.1| hypothetical protein STIAU_7318 [Stigmatella aurantiaca DW4/3-1]
          Length = 698

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 238/538 (44%), Gaps = 49/538 (9%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + Y N   HIGH  E +  D+  RF R  G +V++    D HG  I   A   G+  + F
Sbjct: 1   LPYANGPIHIGHVVEYVQTDIYVRFLRSCGKNVVYFCADDTHGTPIELNAAKQGLKPEEF 60

Query: 73  VDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
           V +     R D AD  DIS D F  T    +     +++ ++ +KGDI +      Y  +
Sbjct: 61  VARCYELHRKDFAD-FDISVDYFHSTHSPENRAYSELIYGRLKEKGDIERRDIEQTYCEK 119

Query: 132 DEAYYNDDEVYKG------ADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK---L 176
           D+ +   D   KG      A  QY ++       ++P   ++           + +   L
Sbjct: 120 DKRFL-PDRFIKGTCPNCKAKDQYGDSCEKCGKAYSPTDLIDPHCSLCGTPPVRKRSTHL 178

Query: 177 LSYYESHPEFILPIERR---------NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
                 H  F+  + RR          ++  F + GL D  +SR    +G  IP +    
Sbjct: 179 FFKLSRHEAFLRELLRRPGFLNQGLATQLQGFFEKGLADWDISRDGPYFGFAIPGETDKY 238

Query: 228 MYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRFHAIYWPAFL 279
            YVW+DA   Y+ TT       G   S   +W  D     +H IGKDI+ FHA++WPA L
Sbjct: 239 FYVWLDAPIGYIATTEKWAQETGKAKSALDYWGPDSNTRIVHFIGKDIVYFHALFWPAVL 298

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             A+L  P +V +HG +   GEK+SK+ G +I   + ++++    LR+F    +  G + 
Sbjct: 299 KVADLHGPDEVKAHGHLTVNGEKMSKTRGTLIPARDYLDKLDPSYLRFFYAACLGSGPED 358

Query: 340 F-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
           F       + RVN +L N +GNL +R+++M+    +  +  PG+       + +  +RV 
Sbjct: 359 FDLSLKDFRLRVNGELVNNVGNLANRALTMLAGPLEKRL-APGSTGAGKALVEAALARV- 416

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            E+RE  +      A+  ++ +    + +  AQ PW   KT+ + A   L    +V+  L
Sbjct: 417 PEVREAFEKLEYRNAIKAIVEISQTANAFLQAQAPWAKVKTDAEGARADLSDAADVVYLL 476

Query: 459 AILLQAFVPKLANKIF------DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             LL   +P++ +K+F       + F A E   +  LD+    G     T +P+ PR 
Sbjct: 477 GALLAPVIPRVTDKLFAQLGAPPLTFAALETARYPLLDRSRPIG-----TPEPLLPRL 529


>gi|291618086|ref|YP_003520828.1| MetG [Pantoea ananatis LMG 20103]
 gi|291153116|gb|ADD77700.1| MetG [Pantoea ananatis LMG 20103]
          Length = 677

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRELAGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +  +A ++P + ++           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 LRDSEHFFFDLPSFSEMLRAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L +  G  +  +FW  D      H IGKDI+ FH
Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDINFDEFWQQDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A    D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKLSAELA----DPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                   ++I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFLDASEKIGEAWASREFGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 478 SMGINLFRVLMTWLKPVMPSLSAR 501


>gi|148827028|ref|YP_001291781.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|187647724|sp|A5UF42|SYM_HAEIG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148718270|gb|ABQ99397.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 682

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 237/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L N +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ D   +RVN D+ N + NL SR+   I K ++  +    A    DES+ 
Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFESKL----ADKLEDESLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|317482648|ref|ZP_07941662.1| tRNA synthetase class I [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915894|gb|EFV37302.1| tRNA synthetase class I [Bifidobacterium sp. 12_1_47BFAA]
          Length = 621

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 246/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +   +GA G   +A  N         PV        ++
Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            + E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWG
Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  
Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 476 ATEPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522


>gi|229105649|ref|ZP_04236282.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228677785|gb|EEL32029.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 544

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 246/541 (45%), Gaps = 56/541 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q+++    E   +       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPVGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K YDG++P      E  E 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPNRIINEELKEK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           I      +   + E+++      AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 I----EGLYINVGESIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             V +I   A LL+ F+P  + ++ + L +   N          +P  ML    D + P 
Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRNTLSIVKRN---------WEPQNMLPNKIDSVQPL 523

Query: 510 F 510
           F
Sbjct: 524 F 524


>gi|261867564|ref|YP_003255486.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412896|gb|ACX82267.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 686

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 240/507 (47%), Gaps = 48/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKAD 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+T +  +D   +  + MAD    +IS+D++  T  + + +   +++ ++ + G I  
Sbjct: 65  QMGITPEQLIDDVRQ--KHMADFAGFNISFDNYHSTHSEENRELSELIYNRLKENGFIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              S  Y   ++  +  D   KG             + +   A ++P + +         
Sbjct: 123 RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELISPRSVVSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    
Sbjct: 182 TPVMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP------DGSKAKFWPADL-HVIGKDIL 268
           +G +IP++     YVW+DA   Y+ +   L         DG   K   A+L H IGKDI+
Sbjct: 239 FGFQIPNEEGKYFYVWLDAPIGYMASFKNLCKRESHIDFDGLWRKDSDAELYHFIGKDIM 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A+   P  +F HG++   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 299 YFHSLFWPAMLEGADFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYY 358

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVN DL N + NL SR+   I K +DG +    A +  D
Sbjct: 359 YAAKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AASLDD 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
           +++        ++I    +N+   +A+ ++++L  + ++Y D + PW + K     A   
Sbjct: 415 QALFDEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYIDDKVPWVIAKEAGKDAELQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            V  + +++ R L   L+  +PKLA +
Sbjct: 475 AVCSMGIQLFRVLMGYLKPVLPKLAER 501


>gi|213693272|ref|YP_002323858.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254782853|sp|B7GP85|SYM_BIFLI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|213524733|gb|ACJ53480.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 621

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 245/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGSQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +   +GA G   +A  N         PV        ++
Sbjct: 123 QVAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            + E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWG
Sbjct: 183 EQTEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  
Sbjct: 417 NF-GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K     R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 476 ATEPWKIKDDQA-RLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 522


>gi|327394485|dbj|BAK11907.1| methionyl-tRNA synthetase MetG [Pantoea ananatis AJ13355]
          Length = 677

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 230/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRELAGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +  +A ++P + ++           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 LRDSEHFFFDLPSFSEMLRAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L +  G  +  +FW  D      H IGKDI+ FH
Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDINFDEFWQQDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +    A    D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKLSAELA----DPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                   ++I E   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFLDASEKIGEAWASREFGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 478 SMGINLFRVLMTWLKPVMPSLSAR 501


>gi|228470762|ref|ZP_04055611.1| methionyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307526|gb|EEK16528.1| methionyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 683

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 246/519 (47%), Gaps = 43/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  IA  A+
Sbjct: 7   KRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAIKAK 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +  VD+     ++    L I +D + RTT + H  T    + K+ + G + +  
Sbjct: 67  AEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTASAFFTKLYESGKLIEQT 126

Query: 124 YSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQ-----HNPV-----Q 158
              +Y    + +  D           +E   G    A G   +A      H+ +     +
Sbjct: 127 SEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGAKPE 186

Query: 159 WMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             E + ++  L  Y+  L  +  E H E+   +    +  S++  GL+  +++R   DWG
Sbjct: 187 LRETKHWYLPLGDYESFLREWILEGHKEWKPNV--YGQCKSWLDLGLQPRAVTRD-LDWG 243

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P       ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 244 IPVPLQGAEGKVLYVWFDAPIGYISNTKEL-LPDSWRT--WWCDPETRLIHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G+KIS S    I   E ++E+    D LRY
Sbjct: 301 HCIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  TE D
Sbjct: 361 VLTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGRLTEID 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           E +L   + +  E+ + +++     AL   + L    ++Y    +PW++ K++PDR +T+
Sbjct: 421 EEMLREVAAIPAELDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           L++ ++++  L I    F P    ++  +L V +E   F
Sbjct: 481 LHLALQLVGNLTIAFAPFTPFSTRRLLAMLQVGEEGFAF 519


>gi|189346708|ref|YP_001943237.1| methionyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|226710900|sp|B3ECI3|SYM_CHLL2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189340855|gb|ACD90258.1| methionyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 702

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 255/545 (46%), Gaps = 63/545 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+   +  ++TA+ Y N   H+GH A   + AD+  R+ R+ G DV+   G+DEHG  I 
Sbjct: 1   MQHVTRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRMKGEDVIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
             A+  G++ +  VD+    NS  FR       IS+D + RT+ + HHDT +  + +I  
Sbjct: 61  ITAEKEGISPQDVVDRYHRMNSEAFRKCG----ISFDYYGRTSSQGHHDTAKEFFLEIER 116

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG 164
           KG   +     ++  + E + +D  V             G   +      +P + +  + 
Sbjct: 117 KGIFRRKTEKLFFDAKAERFLSDRYVTGTCPICNNPEANGDQCEQCGTHLSPTELLNPKS 176

Query: 165 --------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                         ++F L  +Q+ L +Y  SH     P    N   +++K GL D +++
Sbjct: 177 KLSDATPELRDTMHWYFPLGRFQEALEAYVASHEHDWRP-NVVNYTRTWLKQGLNDRAIT 235

Query: 211 RKTFDWGIKIP-DDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKA---KFW--PAD-- 259
           R    WGI++P DDP+    ++YVW DA+  Y++ T       G ++    +W  P    
Sbjct: 236 RD-LSWGIQVPLDDPEACGKVLYVWFDAVLGYISFTRQWAAEAGDESLWRAYWQDPESRV 294

Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++ IGKD + FH + +PA L++ N         L   V +  F+  +G K SKS    + 
Sbjct: 295 VNFIGKDNVVFHTLMFPAILMAWNEGRQSGIYNLADNVPASEFMNFEGRKFSKSRNYAVY 354

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             E +E+   D LRY +       KD  +     + R N +LA+ +GN + RSV      
Sbjct: 355 LGEFLEKFPADTLRYSIAMNYPENKDTDFSWQDFQNRTNGELADTLGNFIKRSVDFTNSR 414

Query: 373 YDGMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +DG++P   + T+ D ++L +  S+ ++++ +  +   I    +  + +    +R+    
Sbjct: 415 FDGVVPF--SCTDDDWNVLGIDWSQTIEKLDQAYEQFHIRETASLGMDIARSANRFLTES 472

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +PW++ KT+ + A+  + +++ +   LAI L   +P+ A +I+ +L          S+D 
Sbjct: 473 EPWKVIKTDREAAAKTMALSLNLCYALAITLYPVIPETAGRIYAMLGFEG------SIDA 526

Query: 492 RLKPG 496
           R+K G
Sbjct: 527 RIKRG 531


>gi|330937550|gb|EGH41491.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 682

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L  +  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKRWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKILLTNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|222098488|ref|YP_002532546.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782851|sp|B9J4E0|SYM_BACCQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221242547|gb|ACM15257.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 544

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 240/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKDIADQYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E+  +      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I     LL+ F+P  + +I + L + + N
Sbjct: 474 CVYLIANFVNLLEPFLPFSSERIRNTLSIVNRN 506


>gi|170024779|ref|YP_001721284.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|226710944|sp|B1JPY8|SYM_YERPY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169751313|gb|ACA68831.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 675

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 224/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDILRFH 271
           ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVN D+ N + NL SR+   I K + G +    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNVDIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
               +     I +   N+   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|307251899|ref|ZP_07533800.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306860591|gb|EFM92603.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 678

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160
            +    + +  D  V KG      A+ QY +      + ++P+  +              
Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  I
Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L + +G    +FW  D      H IGKDI+ FH+++
Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ + 
Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFAE 412

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  + 
Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +P+LA +
Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493


>gi|183598265|ref|ZP_02959758.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
 gi|188020435|gb|EDU58475.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
          Length = 675

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 230/503 (45%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +  +   ++  +D      ISYD++  T  + +     +++ K+ + G I     S
Sbjct: 67  GVSPEDMIAAVNKEHQDDFAGFAISYDNYHSTHSEENKQLSELIYNKLKNNGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             Y   ++  +  D   KG      A+ QY        A ++P + +             
Sbjct: 127 QLYD-PEKGMFLPDRFVKGTCPTCKAEDQYGDNCEVCGATYSPTELINPRSVVSGATPEM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 186 RDTEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G+    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGNINFDEFWNKDSKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K + G +        +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFGGKLSD----NIADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
                  Q I +   ++   +A+ ++++L    +RY D + PW + K          +  
Sbjct: 419 QQFIDAAQIIGDAYTSREYGKAVREIMALADLANRYVDEKAPWVVAKQEGKDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + + + R L   L+  +P LA +
Sbjct: 479 MGINLFRVLMTYLKPILPGLAKR 501


>gi|229181329|ref|ZP_04308659.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228602222|gb|EEK59713.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 544

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 239/514 (46%), Gaps = 47/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q K+    E   E       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQQKIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + F
Sbjct: 239 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDQEFWASEAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G++P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + +++ E ++      AL  V   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 V----EGLYKQVGEAIEQTKFKVALETVFDTVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 473 NCVYLIANFAHLLEPFLPFSSERVRNTLSIVKRN 506


>gi|297572126|ref|YP_003697900.1| methionyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932473|gb|ADH93281.1| methionyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 601

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 236/542 (43%), Gaps = 86/542 (15%)

Query: 7   LYISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + I +A+A+P  N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA 
Sbjct: 1   MKILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAAD 60

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+N+R   +    L +SYD F RTT + H D  + L          ++GC
Sbjct: 61  KEGVTPQQLADKNNRIIAEDLVNLGLSYDLFTRTTTQNHVDVVQHL----------FEGC 110

Query: 124 YSGWYSLRDEAYYNDDEVY------------------KGADGQYYNAQHN---------P 156
               Y + +E     D                      GA G   +A  N         P
Sbjct: 111 RDNGYMIVEEQLVAIDPKTGNTLPDRFIEGTCPICGAAGARGDQCDACGNQLDPQDLIDP 170

Query: 157 V--------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL- 207
           V         +   E YF  L A  D L S+ +   E     + R  VISF K  L D+ 
Sbjct: 171 VSKVSGLAPNFTSTEHYFLDLPALADALGSWLDEVEE---DGKWRPNVISFSKHLLDDVR 227

Query: 208 --SLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-- 260
             ++SR    WGI +P   D P   +YVW DA+  YL+ +        +  +  P D   
Sbjct: 228 PRAMSRD-ISWGIPVPGWEDKPNKRLYVWFDAVVGYLSASIEWARRRAAAGEGSPEDWRE 286

Query: 261 ----------HVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFI 296
                     + +GKD + FH+  WPA LL+ N              L LP +V +  F+
Sbjct: 287 WWTNPEALSYYFMGKDNIVFHSQIWPAELLAYNGTGSKGGQARDFGTLNLPTQVVASEFL 346

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K S S   VI   +V+     DALRYF+        D  +      +R N++L  
Sbjct: 347 TMEGKKFSSSKNVVIYVRDVLSRYQADALRYFISIAGPETSDSDFTWSEFVRRNNSELVA 406

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             GNLV+R+ +MI K++ G IPTPG   + D  +L         +   +       AL +
Sbjct: 407 AWGNLVNRTGAMIAKNF-GEIPTPGESEQIDTDLLDAVRGGFDTVGGLIGAHQQRAALTE 465

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++ LV E + Y    +P++LK     +R +TVL   V+ +  L  ++  F+P  +N I  
Sbjct: 466 IMRLVGEANTYVTRTEPFKLKAPEQRERLATVLNTLVQAVSDLNTMMSVFLPHSSNAIDQ 525

Query: 476 IL 477
           +L
Sbjct: 526 VL 527


>gi|88799942|ref|ZP_01115514.1| Methionyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777373|gb|EAR08576.1| Methionyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 684

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 243/546 (44%), Gaps = 51/546 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ +++A+ Y N Q H+GH  E I  D+  RF +  G + ++    D HG  +  
Sbjct: 1   MSAKRKILVTSALPYANGQLHLGHLMEQIQTDIWVRFQKSMGHECMYVCADDTHGTAVML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G + + ++++ + + +  ++   I +D++  T    +     +++ ++ + G I 
Sbjct: 61  RAEKEGKSPEAWIEKMNADHKADSEGFLIGHDNYYSTHSNENQHYAELIYSRLKENGHIK 120

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
                  Y    E +  D            E   G   +  +A + P + +         
Sbjct: 121 VKTIRQLYDPEKEIFLADRFVKGTCPKCKSEDQYGDACEVCSATYEPNELINPKSAYTGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L  +Q  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPIEKESEHFFFDLPQFQTMLQEWTRSG---TLQDSVANKLSEWLDSGLQAWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDIL 268
           +G +IP  P    YVW+DA   Y+ +   L D  DG     +W  D      H IGKDI+
Sbjct: 238 FGFEIPGAPGKYFYVWLDAPIGYMASFKNLCDRTDGLNFDDYWSKDSDAELYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L SA    P  VF+HG+I   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLTSAEFKTPDGVFAHGYITVNGEKMSKSRGTFIMASTYLKHLSPEYLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++  G +D   +     +RVN DL N   N+ SR    I K   G +    A  E  
Sbjct: 358 YAAKLGYGVEDIDLNLTDFAQRVNTDLVNKFVNIASRCAGFIKKG-GGKLSDNIAEPELL 416

Query: 388 ESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
           + +L   + +  L E RE        +A+ +++ LV + + Y  A++PW L K  +    
Sbjct: 417 DEVLGSKNLIASLYESRE------FSKAVREIMRLVDKANEYIQAKEPWALAKDESKAQE 470

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
              +  + + + R L+I L   +P L  K+   L V  ++  F  LD  L  G  ++K F
Sbjct: 471 VQDICSMGIHLFRALSIYLGPVLPALNEKVRAFLNV--DSLDFTDLDTTLT-GHAINK-F 526

Query: 504 DPIFPR 509
            P+  R
Sbjct: 527 KPLLTR 532


>gi|15602168|ref|NP_245240.1| methionyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431880|sp|P57838|SYM_PASMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12720538|gb|AAK02387.1| MetG [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 682

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 243/538 (45%), Gaps = 59/538 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   A   G
Sbjct: 8   ILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPIMLNADKLG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  + ++  +     +  +ISYD++  T    +      ++KK+   G I     S 
Sbjct: 68  ITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQ 127

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------------- 160
            +   ++  +  D   KG      A+ QY       ++ ++P + +              
Sbjct: 128 LFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A++  L ++ +S     L  E  N++  + +SGL+   +SR    +G KI
Sbjct: 187 ESEHFFFDLPAFEGMLKAWIKSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGFKI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L +  G     FW  D      H IGKDI+ FH+++
Sbjct: 244 PDTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYFHSLF 303

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L   +L  P  VF+HG++   G K+SKS G  I     +  +  + LRY+   ++ 
Sbjct: 304 WPAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLN 363

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D   + +   +R+NAD+ N   NL SRS   I K +DG +    A  E    +L+ 
Sbjct: 364 NRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIAEPE----LLAE 419

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                 +I    + +   + + +V+ L  + ++Y D + PW + K     A    V  + 
Sbjct: 420 FVEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREAELQAVCSMA 479

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE------NR--------CFQSLDQRLKP 495
           +++ R LAI L+  +P++  +     F+ DE      NR         F++L QRL P
Sbjct: 480 LQLFRVLAIYLKPVIPQIIARA--EAFLQDELTWESLNRPLLNHAILPFKALAQRLDP 535


>gi|145638841|ref|ZP_01794449.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|145271813|gb|EDK11722.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|309750825|gb|ADO80809.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 682

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L + +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ D   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|320459453|dbj|BAJ70074.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 616

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 1   MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG    
Sbjct: 61  TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGSQQV 119

Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161
               S   +L D     +  +   +GA G   +A  N         PV        ++ +
Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWGI 
Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GKD 
Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGKDN 293

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++
Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  A 
Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 517


>gi|239621089|ref|ZP_04664120.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239516011|gb|EEQ55878.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 616

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 1   MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG    
Sbjct: 61  TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 119

Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161
               S   +L D     +  +   +GA G   +A  N         PV        ++ +
Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWGI 
Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GKD 
Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 293

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++
Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  A 
Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 517


>gi|289647567|ref|ZP_06478910.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 682

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWTLAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|311114169|ref|YP_003985390.1| methionine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945663|gb|ADP38367.1| methionine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 623

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 242/529 (45%), Gaps = 68/529 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 6   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 65

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + ++++    G IYKG  
Sbjct: 66  GVSAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQ 124

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 125 KVAISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPR 183

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E YF  L A  D  LS+  S   +      R  VI+F     K++     T   DW
Sbjct: 184 FEETEHYFLDLPALADANLSWLNSRDGW------RTNVINFSIGLFKEVKPRAITRDIDW 237

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIG 264
           GI +P     D+P   +YVW DA+  YL+ +       G    +  W  D      + +G
Sbjct: 238 GIPVPVEGWVDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMG 297

Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G V
Sbjct: 298 KDNITFHSQIWPSEMLAYNGAGSKGGEAGVYGPLNMPEQVVASEFMTMEGKKFSSSRGIV 357

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I 
Sbjct: 358 IYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFVRHNNEELAASWGNLVNRVANLIH 417

Query: 371 KDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           K++ G IP     + T+ D ++L   S   + +   ++      AL + + +VS++++Y 
Sbjct: 418 KNF-GEIPALDENSMTDMDRALLDQTSNAFEIVGGLIERHHQKNALNEAMRVVSDINKYI 476

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            A +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 477 SATEPWKIKD-DEARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 524


>gi|307256395|ref|ZP_07538177.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865025|gb|EFM96926.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 678

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160
            +    + +  D  V KG      A+ QY +      + ++P+  +              
Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  I
Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L + +G    +FW  D      H IGKDI+ FH+++
Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ + 
Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKCFEGKL----ADKLEDEALFAE 412

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  + 
Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +P+LA +
Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493


>gi|219851353|ref|YP_002465785.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782869|sp|B8GFL4|SYM_METPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219545612|gb|ACL16062.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 663

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 227/509 (44%), Gaps = 40/509 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N   H+GH    +  D+  R+ R  G +V+F  G+D HG  I  +A+  G
Sbjct: 6   ILVTCGLPYTNGPCHLGHLRTYVPGDMYVRYLRHRGEEVVFVCGSDNHGTPIVVSAEEQG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K    +   +F +    + I +D F  T  K +H   R + +++ DKG IY    S 
Sbjct: 66  VTPKELSLKYHHHFEETFIKMGIRFDRFGMTDGKANHHRTREMMQRLIDKGYIYSATVSQ 125

Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ-HNPV--------QWME 161
            Y      +  D                DE  +G        +  +PV        +   
Sbjct: 126 SYCTTCSRFLPDRYVEGICPHCGAVARGDECDQGCGKHLEPGEIRDPVCKVCGTRAELRS 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E +FF+LSA+++ L ++ +           +N  + +V   L D  ++R T DWG+K P
Sbjct: 186 QEHFFFKLSAFKEFLGTFLKG---VRGTDNAKNYALGWVNDDLHDWCITR-TLDWGVKFP 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIYWPA 277
                ++YVW+DA   Y+  T       G   + FW  D    H IG DI   H I+WPA
Sbjct: 242 GRDDLVVYVWVDAPVGYIAFTEEWAAAHGRDWREFWCGDGEITHFIGGDITYHHCIFWPA 301

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
            L  A   +P  + + G +     K SKS G V+   +   ++G+  D LRY+L+   + 
Sbjct: 302 LLKGAGYGVPSAIVASGMLKIDDHKFSKSRGYVVWTNDDYLDLGLPADYLRYYLLAYTSH 361

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  +       RVN +L N  GN V R++        G IP      ++D+ IL    
Sbjct: 362 TKELNFSWQAFADRVNNELVNTFGNFVHRTLHFAHAQGIG-IPD----LDADQEILQRID 416

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             +  +   M       A+  V++L +  + Y     PW+L KT+   A  V+   ++++
Sbjct: 417 ETIAAVDTAMDAFEFKNAVDAVMTLAAFGNNYIQTAAPWKLIKTDRPAAVQVIRNCLQLV 476

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           R LA+L+   +P+ A+KI+ +L   D+ R
Sbjct: 477 RALALLIDPTMPETASKIWMMLGETDQVR 505


>gi|187649798|sp|A3MZ70|SYM_ACTP2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 679

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 234/502 (46%), Gaps = 43/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   
Sbjct: 4   KMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S
Sbjct: 64  GITPEQLIEKAKADHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVIS 123

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------- 160
             +    + +  D  V KG      A+ QY +      + ++P+  +             
Sbjct: 124 QLFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAISGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPNFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            +E+ R L   L+  +P+LA +
Sbjct: 476 GIELFRVLMSYLKPVLPQLAER 497


>gi|289626587|ref|ZP_06459541.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867252|gb|EGH01961.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 682

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWTLAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|218890270|ref|YP_002439134.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226695283|sp|B7UWJ8|SYM_PSEA8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218770493|emb|CAW26258.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 677

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ D G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P +  + +     
Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382
           +   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P  
Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
                  +L+        I E  + +  +RA+ ++++L    + +   Q PW L K    
Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|257486635|ref|ZP_05640676.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|330984847|gb|EGH82950.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331010115|gb|EGH90171.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 682

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|107103015|ref|ZP_01366933.1| hypothetical protein PaerPA_01004084 [Pseudomonas aeruginosa PACS2]
          Length = 677

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ D G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P +  + +     
Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382
           +   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P  
Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
                  +L+        I E  + +  +RA+ ++++L    + +   Q PW L K    
Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|71735657|ref|YP_273635.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123747684|sp|Q48LT7|SYM_PSE14 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71556210|gb|AAZ35421.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 682

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNFEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|188533441|ref|YP_001907238.1| methionyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|226710906|sp|B2VIF6|SYM_ERWT9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|188028483|emb|CAO96345.1| Methionyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 676

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 224/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGVAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +  +A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPNCKSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L  +   L ++  S     L  +  N++  +  SGL+   +SR    +G 
Sbjct: 185 LRDSEHFFFDLPEFSAMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWQKDSDAELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A    D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAELA----DPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                     I +   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFIDASTSIAQAWSSREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTWLKPVMPSLAER 501


>gi|71065987|ref|YP_264714.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123748115|sp|Q4FRS8|SYM_PSYA2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71038972|gb|AAZ19280.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 700

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 251/556 (45%), Gaps = 60/556 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK RE L +++A+ Y N   H+GH  E I  D+  R  +  G  V +    D HG  I  
Sbjct: 1   MKVREIL-VTSALPYANGDIHLGHLVEYIQTDIWVRSMKAQGHKVTYVCADDAHGTAIML 59

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A++ GVT  +   +  + +  D A  L I++D++  T  + + +   ++++++ D G I
Sbjct: 60  KAEDNGVTPEQQIANVQAAHEADFAKFL-INFDNYHSTHSEENREFSELIYRRLRDTGHI 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQH 154
                   +    + +  D  V KG      A  QY                   Y+   
Sbjct: 119 STRDVEQLFDPEKQLFLADRFV-KGTCPECAAPDQYGDNCEVCGTTYDATELKDPYSTLS 177

Query: 155 NPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           N    ++  + YFF L  ++  L  +  S     L +   N++  +  +GL    +SR  
Sbjct: 178 NATPILKTSKHYFFDLPEFEQFLKDWTRSDNR--LQVSVANKLQEWFDAGLTSWDISRDA 235

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAK-----FWPAD---- 259
             +G +IPD    +P    YVW+DA   Y+ +   L D   G+        +W  +    
Sbjct: 236 PYFGFQIPDTPSDEPDKYFYVWLDAPVGYMASFKNLCDKRAGTDDALDFDHYWAQENEHK 295

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FHA++WPA L  + L  P  VF+HGF++  GEK+SKS G  I     
Sbjct: 296 TEVYHFIGKDIVYFHALFWPAMLAGSELRTPTAVFAHGFLMVNGEKMSKSRGTFIKADTY 355

Query: 317 IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            E +  + LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   +LK YDG
Sbjct: 356 AEHLHPEYLRYYFASKLSDKVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFLLKKYDG 415

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           M+    A    + S+L   ++   EI    +N+   RA+  ++    + + Y D +KPW 
Sbjct: 416 MLTDVCA----EPSLLEDITKTGDEIAAAYENREFSRAMRLIMQCADKANEYIDEKKPWA 471

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K          V  V + + RQL + L   +P+L     + L + D +  F S ++ L
Sbjct: 472 LAKVEGAEQEVQDVCSVAINIFRQLMVYLAPVLPELTANAKEFLNINDLS--FASRNEWL 529

Query: 494 KPGFMLHKTFDPIFPR 509
             G  ++K F P+  R
Sbjct: 530 L-GHQINK-FKPLMQR 543


>gi|261855653|ref|YP_003262936.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836122|gb|ACX95889.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 685

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 225/500 (45%), Gaps = 48/500 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  R  +L G +  +    D HG  I   AQ  
Sbjct: 8   RILVTSALPYANGPLHLGHIIETIQTDIWVRAQKLFGNECRYLCADDTHGTPIMLKAQQE 67

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +   + + D AD + I +D F  T  + +      ++K++  +G I +   
Sbjct: 68  GITPEELITRIGNSHKADFADFM-IGFDIFHSTHSEENRRMASEIFKRLDARGLISRKTI 126

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQW-------------- 159
              Y    E +  D     E  K GA  QY        A ++P +               
Sbjct: 127 KQAYDPEKEMFLPDRFIKGECPKCGALDQYGDNCEKCGATYSPTELKNPRSVLSGATPVE 186

Query: 160 MEEEGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            + E YFF L   QD+L   LS     P        R ++  +  SGL+   +SR    +
Sbjct: 187 RDSEHYFFDLPKMQDRLKQWLSEDRVQPAI------RAKLQEWFDSGLQAWDISRDAPYF 240

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRF 270
           G +IP  P    YVW+DA   Y+     L    G    ++W  +     +H IGKDI  F
Sbjct: 241 GFEIPGAPGKFFYVWLDAPIGYIGAFLKLAESTGLDFDEYWGENAQTELIHFIGKDIAYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L+ A L  P  V++HGF+   GEK+SKS G  I     +  +   ALRY+  
Sbjct: 301 HTLFWPATLMGAGLRTPTAVYAHGFLTLNGEKMSKSRGTFIQARTYLNHLDPQALRYYFA 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++ G D      +  + RVN+DL   + N+ SR    I K ++  +    A +E  E 
Sbjct: 361 AKLSSGIDDIDLSLEDFRLRVNSDLVGKVVNIASRCAGFIHKQFNSELSAELAHSELHEQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +++      + I+   + +   +A+ ++++L   V++Y D +KPW + K+ PD  + V  
Sbjct: 421 LVAAA----ESIKTRYERRETGQAMREIMALADLVNQYIDEKKPWAMAKS-PDSLAAVQG 475

Query: 450 VTVEVIRQLAILLQAFVPKL 469
           V  + +    IL+    P L
Sbjct: 476 VCTDGLNAFRILMTYLTPVL 495


>gi|298488744|ref|ZP_07006773.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156817|gb|EFH97908.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 682

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 237/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     +  +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLHHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLANHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|15598678|ref|NP_252172.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|25009398|sp|Q9HYC7|SYM_PSEAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|9949627|gb|AAG06870.1|AE004769_3 methionyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 677

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ D G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P +  + +     
Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382
           +   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P  
Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
                  +L+        I E  + +  +RA+ ++++L    + +   Q PW L K    
Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|116051500|ref|YP_789665.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388000|ref|ZP_06877475.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313108844|ref|ZP_07794829.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122260639|sp|Q02QX1|SYM_PSEAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115586721|gb|ABJ12736.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881331|gb|EFQ39925.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 678

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ D G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P +  + +     
Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382
           +   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P  
Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
                  +L+        I E  + +  +RA+ ++++L    + +   Q PW L K    
Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|330981556|gb|EGH79659.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 682

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L  +  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDVMLKRWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKILLTNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|312890801|ref|ZP_07750330.1| methionyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296584|gb|EFQ73724.1| methionyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 688

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 251/548 (45%), Gaps = 59/548 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+ A+ Y N   H+GH A   I AD+ AR+ RL   DV+F  G+DEHG  IA 
Sbjct: 4   KTYKRYTITAALPYANGPKHLGHLAGAYIPADLYARYLRLQKRDVVFVCGSDEHGTAIAN 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +  +D+     +   + + IS+D + RT++  HH T +  +  ++DKG   
Sbjct: 64  QAMKEHTTPRAIIDKYHELIKVSFEQIGISFDIYHRTSDPIHHQTAQDFFTNLNDKGIFV 123

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWMEEEG----- 164
           +     +Y     A+  D           +E   G   +      +P + +         
Sbjct: 124 EKEEEQYYDEHAGAFLADRYIIGTCPNCGNENAYGDQCEKCGTSLSPEELIHPRSTLSGN 183

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVISFVKSGLKDLS 208
                    ++  L  Y+D L        E+IL    ++       +  S++  GL   +
Sbjct: 184 KPILKPTKHWYLPLDQYEDWL-------KEWILKDHAKDWRATVYGQCKSWIDGGLHPRA 236

Query: 209 LSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPAD----L 260
           ++R   DWGIK+P       ++YVW DA   Y++ T    LDN D     +W  +    +
Sbjct: 237 VTRD-LDWGIKVPVPGADGKVLYVWFDAPIGYISATKQWALDN-DKDWKLYWQDEESKLV 294

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +  +  LP  V ++ F+  +G+K+S S G  ++  E +E+
Sbjct: 295 HFIGKDNIVFHCIVFPVMLKAHGDFILPDNVPANEFMNLEGDKMSTSRGWSVEMHEYLED 354

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +   VD LRY+L        D  +     + RVN +L   +GN V+R + ++ K YDG +
Sbjct: 355 LPAKVDELRYYLTAIAPETSDSEFTWKDYQARVNNELVAILGNFVNRVMILMHKFYDGRV 414

Query: 378 PTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
               A  + +DES+ +   +   E++ N +     +A   ++ +    +RY   ++PW+ 
Sbjct: 415 EAETATIDLTDESLKAQIGQFYDELQANFEGYKFRQAQQTMMEIARLGNRYLTEKEPWKS 474

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
            KTNPD A   L+  + +I  LA  LQ F+P  A KI  +L      +A +   F +   
Sbjct: 475 IKTNPDDAKAALHNCLVLIVHLATCLQPFLPGTAKKILHMLNWPKDVIAFDEEVFFANGH 534

Query: 492 RLKPGFML 499
           +L P  +L
Sbjct: 535 QLNPSSLL 542


>gi|218900185|ref|YP_002448596.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226695273|sp|B7INU9|SYM_BACC2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218544443|gb|ACK96837.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 544

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 237/514 (46%), Gaps = 47/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++    E   E       R+  I     +VK GL+D  +SR     G+
Sbjct: 183 EHFYFALHTFQQQIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRVVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+  Y + + Y     G    +FW +D    +V GKD + F
Sbjct: 239 PIPVKGYEDKK--IYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K YDG++P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y
Sbjct: 417 V----EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             + +I   A LL+ F+P  + ++   L + + N
Sbjct: 473 NCIYLIANFANLLEPFLPFSSERVRSTLSIVNRN 506


>gi|322692016|ref|YP_004221586.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456872|dbj|BAJ67494.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 616

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 1   MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG    
Sbjct: 61  TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 119

Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161
               S   +L D     +  +   +GA G   +A  N         PV        ++ +
Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWGI 
Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GKD 
Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 293

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++
Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  A 
Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEESSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEAL 517


>gi|239996319|ref|ZP_04716843.1| methionyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 675

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 241/554 (43%), Gaps = 68/554 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ ++ +++A+ Y N   H+GH  E I  D+  RF RL G +       D HG  +  
Sbjct: 1   MSEKRRILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRLRGNECYSVCADDAHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ  G+T +  V +  + + +D+ D   + YD++  T    +   C  ++ ++ + G I
Sbjct: 61  KAQELGITPEEMVARTRAEHHQDLVD-FHVDYDNYYVTHSPENKALCEEIYTRLDNAGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQ------YYNAQHNPVQ---------- 158
            K   +  +    E +  D  V       GA+ Q         A ++P +          
Sbjct: 120 SKRTINQLFDPEKEMFLPDRFVKGTCPSCGAEDQNGDSCDVCGATYSPTEVKNPRSVVSG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L  ++  L  +  S     L  E  N++  +   GL+   +SR   
Sbjct: 180 ATPVLRESEHFFFDLPKFEGMLKEWIRSG---ALQEEMANKLQEWFTEGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP  P    YVW+DA   Y+ +   + D  +     FW AD      H IGKDI 
Sbjct: 237 YFGFEIPGAPNKFFYVWVDAPVGYMASFKNFCDQNNLEFDDFWKADSEAELYHFIGKDIT 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HGF+   G K+SKS G  I     ++ +  + LRY+
Sbjct: 297 YFHCLFWPAMLEGAGYRKPTGVNIHGFVTVNGAKMSKSRGTFIKGRTYLDHLNPEYLRYY 356

Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
              ++    DG  D D       ++VN+DL   + N+ SR  S I K +DG +       
Sbjct: 357 FASKLG---DGVTDIDLNFTDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSENVIEP 413

Query: 381 ---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                F  + ESI ++            + +  H+A+ ++++L  + +++ D   PW   
Sbjct: 414 ELIAEFQNASESIAAL-----------FEKRKYHQAVREIMALADKANQFIDNNAPWVTI 462

Query: 438 KTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K    +  T  V  + + + R L I L+  +P LA K  + L   ++   + SL   LK 
Sbjct: 463 KDEAKQQFTHDVCSLGINMFRLLVIYLKPVLPVLAEKAEEFL---NDKFDWNSLQTLLK- 518

Query: 496 GFMLHKTFDPIFPR 509
           G  ++K F P+  R
Sbjct: 519 GHAINK-FKPMMQR 531


>gi|167763880|ref|ZP_02436007.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC
           43183]
 gi|167697996|gb|EDS14575.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC
           43183]
          Length = 680

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 247/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IG
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +E+    
Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGK 353

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG++P  G
Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAG 413

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   L   + V +E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 414 ELNDYDRETLKEFADVKEEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            R +T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 474 PRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|330898584|gb|EGH30003.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 682

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 237/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L  +  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKRWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P LA      L V     E+      + +L P   L 
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLHVEPLTWEDHKILLTNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPV 537


>gi|310288247|ref|YP_003939506.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309252184|gb|ADO53932.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 620

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+    G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +    GA G   +A  N         PV        ++
Sbjct: 123 KVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DWG
Sbjct: 183 EETEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D ++L   S    EI   ++      AL   + +V ++++Y  
Sbjct: 417 NF-GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVATMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A++PW++K  +  R  TVL+V  + +     LL  F+P  + K+++ L
Sbjct: 476 AEEPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 522


>gi|254242167|ref|ZP_04935489.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|126195545|gb|EAZ59608.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 678

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 52/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ D G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P +  + +     
Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHCIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY
Sbjct: 297 VYFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382
           +   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P  
Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
                  +L+        I E  + +  +RA+ ++++L    + +   Q PW L K    
Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|228961279|ref|ZP_04122898.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798400|gb|EEM45394.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 544

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEITKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + Y     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKYWAEETGKDDQEFWDREAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKRSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|311065111|ref|YP_003971837.1| methionyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310867431|gb|ADP36800.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 620

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+    G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +    GA G   +A  N         PV        ++
Sbjct: 123 KVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DWG
Sbjct: 183 EETEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D ++L   S    EI   ++      AL   + +V ++++Y  
Sbjct: 417 NF-GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A++PW++K  +  R  TVL+V  + +     LL  F+P  + K+++ L
Sbjct: 476 AEEPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 522


>gi|238789828|ref|ZP_04633609.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722024|gb|EEQ13683.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 675

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 227/504 (45%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   ++++++   G I     
Sbjct: 66  LGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYRRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 185 MRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDILRFH 271
           ++PD      YVW+DA   Y+     L +  G     +FW      DL H IGKDI+ FH
Sbjct: 242 EVPDATGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWREGSTTDLYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   
Sbjct: 302 SLFWPAILEGSHFRKPTNIFVHGYVTVNGAKMSKSRGTFIKASTYLKHLDADCLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADQLADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
               +     I E   N+   +A+ ++++L    +RY D Q PW + K     +    + 
Sbjct: 418 YKTFTDAAASIAEAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKEEGRDSDLHAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L  +
Sbjct: 478 SMGINLFRVLMTYLKPVLPSLTER 501


>gi|255318346|ref|ZP_05359581.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379088|ref|ZP_06072244.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304658|gb|EET83840.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298545|gb|EEY86458.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 686

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 237/542 (43%), Gaps = 63/542 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  G
Sbjct: 4   ILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANG 63

Query: 67  VT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T  +   +    + RD  +   + +D +  T    +    + ++ K  + G+I     +
Sbjct: 64  ITPEEQIANVQKEHIRDF-NGFGVHFDHYDSTNSDTNKARSQEIYIKNREAGNIAVRPVT 122

Query: 126 GWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWME------ 161
             +   ++  +  D   KG                A G  YNA    NP   +       
Sbjct: 123 QLFD-PEKGMFLSDRFIKGTCPKCKTEDQYGDSCEACGTTYNATELINPKSTLSGATPVE 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + YFF+L  + + L ++        LP+   N++  +  +GL D  +SR    +G +
Sbjct: 182 KSSDHYFFKLPNFSEYLQTWTRDSGR--LPVSIANKLDEWFDAGLSDWDISRDAPYFGFE 239

Query: 220 IPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ FH
Sbjct: 240 IPDAPDKYFYVWVDAPIGYMSSFENYIQTKRPDLNFDDFWKKDSENEVYHFIGKDIVYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  AN   P  +F +GF+   G+K+SKS G  I     +E +  + LRY+   
Sbjct: 300 ALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYYFAS 359

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D   + D   ++VN+DL   + N+ SR    I   +D  +    A  E  +S 
Sbjct: 360 KLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINTKFDHKLSAECAEPELVQSF 419

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
           +     + +  E RE         A+ ++++L    ++Y D +KPW L K   +  +   
Sbjct: 420 IEAGDSIAKAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKIEGEELQVHN 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQRL 493
           V  V + + RQLAI L   +P LA ++ D L              V  E   FQ L QR+
Sbjct: 474 VCSVGINLFRQLAIYLAPVLPVLAQQVQDFLKLDSFNFESRKQILVNHEIELFQPLMQRV 533

Query: 494 KP 495
            P
Sbjct: 534 DP 535


>gi|330949991|gb|EGH50251.1| methionyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 682

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 237/548 (43%), Gaps = 53/548 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++K++ D G I
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYKRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++    + +   D   KG      A+ QY        A + P    + +    
Sbjct: 120 ATRSVTQYFDPEKKMFLA-DRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKDSKHFFFDLPAFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAALRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGFM 498
              V  + + + RQL I L+  +P LA      L V     AD        + +L P   
Sbjct: 472 VQAVCALGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWADHKTLLA--NHQLNPFSA 529

Query: 499 LHKTFDPI 506
           L    DP+
Sbjct: 530 LMTRIDPV 537


>gi|313140646|ref|ZP_07802839.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133156|gb|EFR50773.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 620

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 66/528 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+    G IYKG  
Sbjct: 64  GLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QW 159
                 S   +L D     +  +    GA G   +A  N         PV        ++
Sbjct: 123 KVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
            E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DWG
Sbjct: 183 EETEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GK
Sbjct: 237 IPVPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGK 296

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI
Sbjct: 297 DNITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVI 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K
Sbjct: 357 YVKDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINK 416

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G IP     + T  D ++L   S    EI   ++      AL   + +V ++++Y  
Sbjct: 417 NF-GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYIS 475

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A++PW++K  +  R  TVL+V  + +     LL  F+P  + K+++ L
Sbjct: 476 AEEPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 522


>gi|84394346|ref|ZP_00993068.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375039|gb|EAP91964.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 686

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 222/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L +   D +  ++W  D      H IGKDI+ FH++
Sbjct: 244 PGEKNKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 304 FWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLAAEFAEPELYNEFVA 423

Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
              R+ Q  E RE        RA+ ++ +L  + ++Y D + PW L K          V 
Sbjct: 424 AAERIGQLYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVS 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P+LA +
Sbjct: 478 SVGINLFRVLMAYLKPVMPELATR 501


>gi|330889575|gb|EGH22236.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 682

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPAFDAMLKSWRRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWVLAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHRTLLGNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|259908021|ref|YP_002648377.1| methionyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963643|emb|CAX55140.1| Methionyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283477916|emb|CAY73832.1| metG [Erwinia pyrifoliae DSM 12163]
          Length = 676

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 225/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGMAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +  +A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPNCQSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L  +   L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 LRDSEHFFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWRQDSDAELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A    D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAEVA----DPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                     I +   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFIDASNSIAQAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDAELQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTWLKPVMPSLAER 501


>gi|269138540|ref|YP_003295240.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984200|gb|ACY84029.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558556|gb|ADM41220.1| Methionyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 682

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 228/504 (45%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 12  KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + + S+  + D AD   ISYD++  T  + +     +++ ++ + G I     
Sbjct: 72  GIAPEQMIAEVSKEHQQDFAD-FQISYDNYHSTHSEENRQLASLIYTRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +   A ++P + +            
Sbjct: 131 SQLYD-PEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPI 189

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L ++   L ++  S     L  +  N++  + +SGL+   ++R    +G 
Sbjct: 190 LRESEHFFFDLPSFGAMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDITRDAPYFGF 246

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L +  G      +W  +      H IGKDI+ FH
Sbjct: 247 EIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDYWGKESDAELYHFIGKDIVYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  D LRY+   
Sbjct: 307 SLFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYAA 366

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K +DG +      T +D ++
Sbjct: 367 KLSDRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGQLSD----TLADPAL 422

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                    EI +  + +   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 423 YQTFVDAAAEIAKAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P L+ +
Sbjct: 483 SMGLNLFRVLMTYLKPVLPALSAR 506


>gi|229147584|ref|ZP_04275929.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228635874|gb|EEK92359.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
          Length = 544

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+K+    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEKIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|146306437|ref|YP_001186902.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|187647744|sp|A4XS54|SYM_PSEMY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145574638|gb|ABP84170.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 678

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 238/548 (43%), Gaps = 54/548 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E +  D+  R+ +L G   ++    D HG  I  
Sbjct: 1   MTEARKILVTSALPYANGSIHLGHMLEYVQTDMWVRYQKLRGNQAIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD   + +D++  T  + + +    ++  + DKG I
Sbjct: 61  RAEKEGITPEQLIDGVRAEHMADFAD-FGVDFDNYHSTHSQENRELSASIYLALRDKGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160
                + ++      +  D  +       GA+ QY        A + P +          
Sbjct: 120 ATRAVTQYFDPEKGMFLADRFIKGSCPKCGAEDQYGDNCEKCGATYTPTELKNPRSAISG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +FF+L  ++  L  +  S     L     N++  ++  GL++  +SR   
Sbjct: 180 AVPVLKESQHFFFKLPDFEAMLKQWTRSG---ALQEAVANKIAEWLDGGLQEWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IP +P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCSKRPELDFDAFWGKDSTAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K  DG++         
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGLL----VAANP 412

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           +  +          I E  + +   RA+ ++++L    + +   + PW L K    +A  
Sbjct: 413 EPELWDAFQAAAPSIAEAYEARDFSRAMREIMALADRANAWIADKAPWALNKVEGKQAEV 472

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL---DQRLKPGFMLHK 501
             +  + + + RQL I+L+  +PKLA      L V  +     SL   + +L P      
Sbjct: 473 QEICALGINLFRQLVIMLKPVLPKLAADAEAFLNVKPQTWADLSLPLANHQLNP------ 526

Query: 502 TFDPIFPR 509
            F+P+  R
Sbjct: 527 -FNPLLTR 533


>gi|307247346|ref|ZP_07529394.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307249570|ref|ZP_07531557.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307262950|ref|ZP_07544572.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|306856190|gb|EFM88345.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306858425|gb|EFM90494.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306871576|gb|EFN03298.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 678

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 234/501 (46%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160
            +    + +  D  V KG      A+ QY +      + ++P+  +              
Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVK 179

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  I
Sbjct: 180 ESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ FH+++
Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ + 
Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFAE 412

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  + 
Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +P+LA +
Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493


>gi|145636862|ref|ZP_01792527.1| putative ATPase [Haemophilus influenzae PittHH]
 gi|145269943|gb|EDK09881.1| putative ATPase [Haemophilus influenzae PittHH]
          Length = 682

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 237/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAS-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DES+ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|227501490|ref|ZP_03931539.1| methionyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077515|gb|EEI15478.1| methionyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 572

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 226/494 (45%), Gaps = 64/494 (12%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G +VL  +GTDEHG  +   A   GV+ +   D+ +R   +    L +SYD F RTT 
Sbjct: 1   MRGRNVLMVSGTDEHGTPLLVQADKEGVSVRELADRYNRQIVNDLANLGLSYDLFTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYS-----------LRDEAYYNDDEVYKGADGQ 148
           + H+   + L+K +++ G + K    G  S           +       D +  +G    
Sbjct: 61  RNHYSVVQELFKGLNENGYMLKETTKGAISPSTGRTLPDRYIEGTCPICDADGARGDQCD 120

Query: 149 YYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
               Q +PV              Q++E E +   L + +D+L  +  +  ++      R 
Sbjct: 121 NCGNQLDPVDLIDPVSKINGETPQFVETEHFLLDLPSLKDELQKWLSTREDW------RP 174

Query: 195 EVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----G 243
            V+ F  + L+D+     T   DWGI IP     D+    +YVW DA+  YL+ +     
Sbjct: 175 NVLKFSLNLLEDMRPRTMTRDIDWGIPIPVDGWQDNNAKKLYVWFDAVVGYLSASIEWAH 234

Query: 244 YLDNPDGSKAKFW--PADLHVI--GKDILRFHAIYWPAFLLS--------------ANLP 285
               P+  K +FW  P   H    GKD + FH+  WPA LL                 L 
Sbjct: 235 RTGQPEAWK-EFWQDPETRHYYFQGKDNITFHSQIWPAELLGYAGKGSKGGELHQYGELD 293

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP ++ S  ++   G K S S G VI   + + E G D LRYF+        D  +  D 
Sbjct: 294 LPTEIVSSEYLTMSGSKFSSSKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDADFTWDE 353

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
             +RVN +LANG GNLV+R+VSM  K++ G +P P A  E DE+IL +           +
Sbjct: 354 FVRRVNNELANGWGNLVNRTVSMAHKNF-GEVPVPAALEERDEAILQLAEETFTTAGNLL 412

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQ 463
           +     +A+  ++ +V E + Y  +Q+PW+L K  T  +R +TVL+  ++V+    ++L 
Sbjct: 413 EQSKFKQAIVSIMHVVGEANAYIASQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLT 472

Query: 464 AFVPKLANKIFDIL 477
            F+P  A K+ + L
Sbjct: 473 PFLPFTAQKVHETL 486


>gi|313200895|ref|YP_004039553.1| methionyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312440211|gb|ADQ84317.1| methionyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 696

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 234/512 (45%), Gaps = 47/512 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+  
Sbjct: 21  KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 80

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + + ++ ++ D +  L + +D++  T    + +    ++ ++   G I     
Sbjct: 81  GITPEQLIAKVHTEHYADFSGFL-VEFDNYYSTNAPENRELASNIYLELKKNGKIATKTI 139

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------------ 160
             ++    + +   D   KG      A  QY ++       ++P + +            
Sbjct: 140 EQFFDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTELINPYSAVSGAAPV 198

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+LS   + L  +  S     L  E  N++  +  SGL D  +SR    +G 
Sbjct: 199 RKETEHYFFKLSECGEFLQQWTRSG---TLQAEAANKMGEWFASGLSDWDISRDAPYFGF 255

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   Y+ +   L +  G    ++W AD      H IGKDIL FHA
Sbjct: 256 EIPDAPGKYFYVWLDAPIGYMASFKNLCSRLGLDFDEYWKADSKTELYHFIGKDILYFHA 315

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331
           ++WPA L  +    P ++F+HGF+   GEK+SKS G  I     ++ V   + LRY+   
Sbjct: 316 LFWPATLKYSGHRQPTQIFAHGFLTVNGEKMSKSRGTFITAGSYLQHVKNPEYLRYYYAA 375

Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D   + D    RVN+DL     N+ SR+   I K +DG +         D ++
Sbjct: 376 KLNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLAAL-----VDNAV 430

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
           ++   +    I E    +   RAL ++++L  + + Y     PW++ K     A    V 
Sbjct: 431 ITELRQAASSIAECYNMRDYGRALREIMALADKANGYVAEHAPWDMAKQAGREAELHQVC 490

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +E+ R L + L+  +PKLA +I   L +A
Sbjct: 491 TAALEMFRLLTLYLKPVLPKLAGQIEAFLNIA 522


>gi|255529999|ref|YP_003090371.1| methionyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255342983|gb|ACU02309.1| methionyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 702

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 241/525 (45%), Gaps = 59/525 (11%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   HIGH A   + AD   R+ R +  DV F  G+DE+G  I   A+  GV
Sbjct: 11  VTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVPITLKAKKEGV 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +V VD+  +   D      +S+D + RT+   HH T    ++ + +KG   +     +
Sbjct: 71  TPQVIVDKYHKIIGDSFKEFGVSFDIYHRTSSLMHHQTASDFFETLYNKGVFTEEVTEQY 130

Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHN--------------------PVQWMEE 162
           Y  + + +  D  +       G +  Y +   N                    P    E 
Sbjct: 131 YDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTLSGEPPVRKET 190

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
             +F  L  Y+++L  Y + H E+   +    +  S++ +GL+  +++R   DWG+K+P 
Sbjct: 191 RNWFLPLDKYEEQLRKYIDGHKEWKPNV--FGQCQSWLNAGLQPRAMTRD-LDWGVKVPL 247

Query: 222 -DDPQYIMYVWIDALTNYLTTT------GYLD--NPD-------------GSKAKFWPAD 259
            D    ++YVW DA   Y++ T        LD  NP              GS   +W  +
Sbjct: 248 KDAEGKVLYVWFDAPIGYISATKELFEYARLDVWNPKAEEYYINQSEVEKGSWEDYWKDE 307

Query: 260 ----LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
               +H IGKD + FH I +PA L++  +  L   V ++ F+  +G+KIS S    +   
Sbjct: 308 EAKLVHFIGKDNIVFHCIIFPAMLMAHGDYILADNVPANEFLNLEGQKISTSKNWAVWLN 367

Query: 315 EVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           E +EE     D LRY L       KD  +     + R N +L   +GN V+R V +  K 
Sbjct: 368 EYLEEFKDKQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFVNRVVVLTHKY 427

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G +P     T  D+ ++   +    +I  +++N     AL +V+++    ++Y    +
Sbjct: 428 FKGKVPMCMHITPEDQQVMDELAAAPAKISASIENYRFREALGEVMNVARLGNKYLADTE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW++ KT+ DR  T+L +++++   L IL++ F+P  A+K+  +L
Sbjct: 488 PWKVIKTDEDRVRTILNISLQIAANLEILIEPFLPFTADKLMKML 532


>gi|34540030|ref|NP_904509.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|68565991|sp|Q7MXK7|SYM_PORGI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|34396341|gb|AAQ65408.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 680

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 239/510 (46%), Gaps = 37/510 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G D L   G+DEHG  IA 
Sbjct: 3   RQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIAL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +  VD+     +   + L IS+D + RTT   H  T    +K + +KG+  
Sbjct: 63  KAKAEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFV 122

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWMEEE 163
           +     +Y    + +  D            D  Y     A G   NA    +P   +   
Sbjct: 123 EQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEACGTSLNATDLIDPRSTISGS 182

Query: 164 GYFFRLSAYQDKLLSYYESH-PEFILPIERR------NEVISFVKSGLKDLSLSRKTFDW 216
               R + +    L  +E    E+IL   +        +  S++  GL+  ++SR   DW
Sbjct: 183 APVLRETKHWYLPLDKHEPFLKEWILDGHKEWKSNVYGQCKSWLDMGLQPRAVSRD-LDW 241

Query: 217 GIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           GI +P +     ++YVW DA   Y++ T  L  PD S   +W ++    +H IGKD + F
Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-CPD-SWETWWKSEDTRLVHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +EE     D LRY
Sbjct: 300 HCIVFPAMLRAEGSFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHKYFDGAVPPKGELTDCD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              +   + V Q +   +       AL + ++L    ++Y    +PW+L KT+ +R +T+
Sbjct: 420 SRTIEEFAAVKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKTDMNRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +++++   LAI  + F+P  + K+  +L
Sbjct: 480 LNLSLQITANLAIAFEPFLPFSSAKLMSML 509


>gi|70607280|ref|YP_256150.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363442|sp|Q4J8M3|SYM_SULAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68567928|gb|AAY80857.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 571

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 256/520 (49%), Gaps = 51/520 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y NA PH+G+    I+ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KVLVTSAWPYVNAVPHLGNLIGSILSADVFARYARLKYGKENVVFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI-------- 113
           +   +  K   DQ ++ + +   D   IS+D++ RT  + H +  R    K+        
Sbjct: 62  RKRNIEPKKLTDQAHAYDKKLFIDTWKISFDNYSRTESEVHKEFVRNFLVKLEKYIKVEE 121

Query: 114 -----SDKGDIY------KGC--YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ----HNP 156
                 +K  ++      KG   Y G+   R +   N   +         NA+     NP
Sbjct: 122 DEIPYCEKDKLFLPDRFIKGVCPYCGFEDARGDQCDNCGRLL--TPRSLVNAKCALCGNP 179

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
             +   + +FF LS + DK+  +  S     +P   ++  +S+VK GL+  S++R    W
Sbjct: 180 PVFKVTKHWFFDLSEFGDKIRDWISSSS--TMPDNVKSVALSWVKEGLRPRSITRDNM-W 236

Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSK--AKFW----PADLHVIGKDI 267
           GI  P        +YVW +AL  YL+ T  Y  N    +   +FW        + IGKD 
Sbjct: 237 GIPAPFAGAENKTIYVWFEALLGYLSATVEYFKNLGKEEMWKEFWLYNDTKTYYFIGKDN 296

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323
           + FHA+  PA L+++N    LP  + +  ++L++G+K SKS  +G  ID  E  + + V+
Sbjct: 297 IPFHAVILPAMLMASNEKYNLPSVIAATEYLLYEGQKFSKSRKIGVWID--EADKLMDVE 354

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--G 381
             R+ L+R     KD  +      + VN +L + IGN  +R +SM+ + YDG++P+P   
Sbjct: 355 YWRFILIRLRPEEKDTNFTWREALRIVNTELNDDIGNYANRVLSMVKRYYDGVVPSPKEA 414

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            F + D++++++     + + E  +   I     +++ L    + Y + + PW L KTN 
Sbjct: 415 IFNDEDKNLITLIKESPKRMGELFELGKIKAGSEEILKLARSGNLYLNNRAPWSLVKTNK 474

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + A+ VLY++V  +R LAI+L   +P  ++ ++  L +++
Sbjct: 475 EEANNVLYISVNSLRTLAIMLYPIMPTYSSNLYQQLGLSN 514


>gi|312883697|ref|ZP_07743421.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368670|gb|EFP96198.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 686

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 223/503 (44%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 72  GLTPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161
             +    E +  D  V KG      ++ QY +   N      P + +E            
Sbjct: 132 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATPIM 190

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLQEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N   D    ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRSDLDFEEYWRKDSTAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLEHLDPECLRYYYAAK 367

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K +DG +    + T ++  + 
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGQL----SATCNEPELY 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 424 REFASAADNIAELYETREFSRAIREITALADKANQYVDEKAPWVVAKEEGKEQELQNICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + + L   L+  +P LA +
Sbjct: 484 VGINLFKVLMTYLKPVMPALAAR 506


>gi|224283491|ref|ZP_03646813.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 616

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 243/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 2   VNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 61

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           T +   ++ +R   +D+ D L +SYD F RTT   H    + L+K+    G IYKG    
Sbjct: 62  TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQKV 120

Query: 125 ----SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHN---------PV--------QWME 161
               S   +L D     +  +    GA G   +A  N         PV        ++ E
Sbjct: 121 AISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRFEE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DWGI 
Sbjct: 181 TEHFFLDLPALAEANLAWLKTRKGW------RTNVINFSIGLFKEVKPRAITRDIDWGIP 234

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GKD 
Sbjct: 235 VPVAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 294

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 295 ITFHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 354

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++
Sbjct: 355 KDILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNF 414

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP     + T  D ++L   S    EI   ++      AL   + +V ++++Y  A+
Sbjct: 415 -GEIPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYISAE 473

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K  +  R  TVL+V  + +     LL  F+P  + K+++ L
Sbjct: 474 EPWKIKD-DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEAL 518


>gi|93006420|ref|YP_580857.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|122989863|sp|Q1QAD0|SYM_PSYCK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|92394098|gb|ABE75373.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 700

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 251/556 (45%), Gaps = 60/556 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK RE L +++A+ Y N   H+GH  E I  D+  R  +  G  V +    D HG  I  
Sbjct: 1   MKVREIL-VTSALPYANGDIHLGHLVEYIQTDIWVRSMKAQGHKVTYVCADDAHGTAIML 59

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A++ GVT  +   +  + +  D A  L I++D++  T  + + +   ++++++ D G I
Sbjct: 60  KAEDNGVTPEQQIANVQAAHEADFAKFL-INFDNYHSTHSEENREFSELIYRRLRDAGHI 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
                   +    + +  D  V KG      A  QY          Y+A    NP   + 
Sbjct: 119 STRDVEQLFDPEKQLFLADRFV-KGTCPECAATDQYGDNCEVCGTTYDATELKNPYSTLS 177

Query: 162 --------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    + YFF L  ++  L  +  S     L     N++  +  +GL    +SR  
Sbjct: 178 NATPILKTSKHYFFDLPEFEQFLKDWTRSDNR--LQTSVANKLQEWFDAGLTSWDISRDA 235

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAK-----FWPAD---- 259
             +G +IPD    +P    YVW+DA   Y+ +   L D   G++       +W  +    
Sbjct: 236 PYFGFQIPDTPSDEPDKYFYVWLDAPVGYMASFQNLCDKRAGTEEALDFDHYWAQENEHK 295

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FHA++WPA L  + L  P  VF+HGF++  GEK+SKS G  I     
Sbjct: 296 TEVYHFIGKDIVYFHALFWPAMLAGSELRTPTGVFAHGFLMVNGEKMSKSRGTFIKADTY 355

Query: 317 IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            E +  + LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   ++K YDG
Sbjct: 356 AEHLHPEYLRYYFASKLSDKVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFLVKKYDG 415

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           M+    A    + S+L   ++   EI    +N+   RA+  ++    + + Y D +KPW 
Sbjct: 416 MLTDVCA----EPSLLEDITKTGDEIAAAYENREFSRAMRLIMQCADKANEYIDDKKPWA 471

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K          V  V + + RQL + L   +P+L     + L + D    F S ++ L
Sbjct: 472 LAKVEGAEQEVQDVCSVAINIFRQLMVYLAPVLPELTANAKEFLNIDD--LSFASRNEWL 529

Query: 494 KPGFMLHKTFDPIFPR 509
             G  ++K F P+  R
Sbjct: 530 L-GHQINK-FKPLMQR 543


>gi|70732169|ref|YP_261925.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123762009|sp|Q4K758|SYM_PSEF5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68346468|gb|AAY94074.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 681

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 228/516 (44%), Gaps = 44/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D A+ L + +D+F  T  + + +    ++ K+ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHCADFAEFL-VDFDNFHSTHAEENRELSSQIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158
                + ++    + +  D  +       G + QY        A + P            
Sbjct: 120 ATRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + + +FF+L  +Q  L S+  S     L     N++  ++ +GL+   +SR   
Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQSWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L +  P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCSRRPELDFDAFWGKDSTAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  I     +E +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLEHLSPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVMVDSNAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            E+ L+        I +  + +   RA+ +++ L    + +   + PW L K     D  
Sbjct: 417 TEAFLAAAP----SIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +    + + RQL I L+  +P LA      L VA
Sbjct: 473 QAICATGIILFRQLVIFLKPVLPLLAADAEAFLNVA 508


>gi|329956546|ref|ZP_08297143.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524443|gb|EGF51513.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 680

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 246/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IG
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + E    
Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLAEFPGK 353

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG++P  G
Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAG 413

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   L   + V +E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 414 ELNDYDRETLKEFADVKEEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            R +T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 474 PRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|59712361|ref|YP_205137.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|68565957|sp|Q5E3Z7|SYM_VIBF1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|59480462|gb|AAW86249.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 686

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 233/541 (43%), Gaps = 62/541 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G DV F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S
Sbjct: 67  GISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158
             +    E +  D  V KG      A+ QY +   N                     PV 
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L N   D +  ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGETNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVN+D+ N I NL SR+   I K +DG +       E     
Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFVEPELYNEF 421

Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 422 IAAADRIAELYETRE------FGRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRLK 494
           V  V + + R L   L+  +P+LA +    L             VA E   F++L  R+ 
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLNETLTWEGVAQPLVAHEITKFKALFARID 535

Query: 495 P 495
           P
Sbjct: 536 P 536


>gi|284161342|ref|YP_003399965.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011339|gb|ADB57292.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 661

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 232/502 (46%), Gaps = 43/502 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    I ADV  R+ RL G  VLF  G+D HG  I   A+  G++
Sbjct: 4   VTCGLPYANGKAHIGHLRTYIPADVYVRYLRLLGEKVLFICGSDCHGTPIVVNAEKEGIS 63

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K  VD+   +F+ +   L++ +D + RT  + +H   + + K + DKG IY       Y
Sbjct: 64  PKELVDRYHEHFQKVFKELEVEFDFYGRTDAEYNHRRTQEIVKTLMDKGYIYAKEIELAY 123

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163
             + + +  D            V +G +      +H               +P  + +++
Sbjct: 124 CPKCDRFLPDRYVEGICPYCGAVARGDECDQGCGRHLEPGEILQPKCKICGSPAVFKKQK 183

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFF+L+A++D L+ Y E+  +        N    +V+  LKD  ++R   +WG+K P +
Sbjct: 184 HYFFKLTAFKDFLMDYLENKLQGTS--NALNYAREWVRRELKDWCITR-NLEWGVKFPGE 240

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWP----ADL-HVIGKDILRFHAIYWPA 277
              ++YVW+DA   Y++ T       G   +  W     +D+ H IG DI+  H I+WPA
Sbjct: 241 -NLVVYVWVDAPIGYISFTEQACKLKGCNWEDIWKNGEISDITHFIGLDIVYHHCIFWPA 299

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
            L  A+  LPK V + G +  +G+  SKS G V+   +   + G   D LRY++V   + 
Sbjct: 300 MLKGADYSLPKAVVASGMVKVEGKTFSKSRGYVVWVEDDYLKAGFHPDYLRYYIVSYTSH 359

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +     K +VN +L    GN + R +    K++  +          D+  L   S
Sbjct: 360 EKDLNFSWRVFKDKVNNELIGTFGNFIYRVLHFAWKNFGRV------RMNVDKETLEKIS 413

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            V  +I E+++           + L +  + +F ++KPWEL KTN +    VL   ++++
Sbjct: 414 NVKDKIVESLKVWEFKEICDAFMELATFGNEFFQSKKPWELIKTNREECERVLANAIQLV 473

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           + L I     +PK    +  ++
Sbjct: 474 KALLIFAYPVMPKSMENVAKVI 495


>gi|301156172|emb|CBW15643.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 682

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+  KG I     
Sbjct: 67  GITPEELIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQLTADIYNKLKTKGFIKTKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWGENSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSEFRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFITKRFEGKL----ADKLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTVQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|145634394|ref|ZP_01790104.1| putative ATPase [Haemophilus influenzae PittAA]
 gi|145268374|gb|EDK08368.1| putative ATPase [Haemophilus influenzae PittAA]
          Length = 682

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 237/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DES+ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|322690077|ref|YP_004209811.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|320461413|dbj|BAJ72033.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 616

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 245/526 (46%), Gaps = 66/526 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 1   MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 60

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           T +   ++ +R   +D+ D L +SYD F RTT   H    + ++K+  + G IYKG    
Sbjct: 61  TAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQV 119

Query: 125 ----SGWYSLRDEAYYNDDEVY--KGADGQYYNAQHN---------PV--------QWME 161
               S   +L D     +  +   +GA G   +A  N         PV        ++ +
Sbjct: 120 AISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQ 179

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            E YF  L A  +   ++ E+   +      R  VI+F     K++     T   DWGI 
Sbjct: 180 TEHYFLDLPALAEANKAWLETRKGW------RTNVINFSLGLFKEVKPRAITRDIDWGIP 233

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +       G   K+  W  D      + +GKD 
Sbjct: 234 VPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDN 293

Query: 268 LRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WP+ +L+ N              L LP++V +  F+  +G+K S S G VI  
Sbjct: 294 ITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYV 353

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++    VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++
Sbjct: 354 KDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF 413

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            G IP     + T  D  +L   S     +  +++      AL++ + +V ++++Y  A 
Sbjct: 414 -GEIPPLDEDSMTNEDRGLLEESSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISAT 472

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +PW++K  +  R  TVL+V  + +     LL  F+P  A ++++ L
Sbjct: 473 EPWKIKD-DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQRVWEAL 517


>gi|229845332|ref|ZP_04465464.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811785|gb|EEP47482.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 682

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 237/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DES+ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|119719527|ref|YP_920022.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|187647776|sp|A1RXT9|SYM_THEPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119524647|gb|ABL78019.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 565

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 244/536 (45%), Gaps = 49/536 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K R K  +  A  Y    PH+G+    ++ ADV ARF RL G +V+F +G+D HG  I  
Sbjct: 4   KARRKWLVLAAWPYAYGVPHLGNLIGSVLSADVAARFLRLAGDEVVFVSGSDMHGTPIEV 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G + K   ++N    +++ +  +IS+D++ +T    H    +  ++++ + G ++
Sbjct: 64  EALKRGESPKDLAERNHEKIKELFERWEISFDNYSKTESPTHIKFVQDFYRRVYENGYVF 123

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWME-------------- 161
                 +Y  +D+ +  D  +     Y G D  Y +   N  + +E              
Sbjct: 124 SDTVQLYYCPKDKIFLPDRYIVGTCPYCGYDRAYGDQCENCGRLLEPTLLLNPRCAICGS 183

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF L    D L  Y E +    LP   RN  +  ++ GLK  +L+R    
Sbjct: 184 TPELRTTTHWFFDLPKLTDALKRYIEENEN--LPPNARNMSLQILRDGLKPRALTRDN-K 240

Query: 216 WGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FW----PADLHVIGKD 266
           WGI    P      +YVW++A+  Y++ T       G   K   FW       ++ IGKD
Sbjct: 241 WGIPAPFPGAEDKTIYVWMEAVLGYISATIEYFASKGEPEKWKEFWLDPETRSVYFIGKD 300

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FH +  PA L+++     LP  V S  ++L +G K SKS  +G  ID  E +E    
Sbjct: 301 NIPFHTLILPALLIASGEKYVLPWTVASTEYLLFRGLKFSKSRRIGVWID--EALEVFPA 358

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R+ LV      KD  +  +   + VN DL + IGN V R + ++ + + G+ P P  
Sbjct: 359 DYWRFVLVSLRPEQKDMSFTWEEFLRIVNNDLNDNIGNFVHRVLVLVQRKFGGIAPAPLD 418

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           F + D           +E+ E M       AL  ++ L S  + Y + +KPWEL   + +
Sbjct: 419 FADEDLKFREEILARSREVAEFMYAFRFKEALTHILWLSSSGNSYLNFRKPWEL---DSE 475

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPG 496
            A T  ++ +  ++ LAI+L   +P+ + +++ +L   D+  N  +  +++ + PG
Sbjct: 476 SARTPAFLALHAVKALAIMLYPIIPRSSQEMWKLLGYKDDIANHRWHEINEAVPPG 531


>gi|319940893|ref|ZP_08015231.1| methionyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805609|gb|EFW02397.1| methionyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 685

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 246/526 (46%), Gaps = 54/526 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R KL+++TA+ Y N   H+GH  E I AD+  R  R+ G  V F    D HG  I  
Sbjct: 1   MKQR-KLFVTTALPYANGAFHMGHIMEYIQADIWVRHERMCGHIVHFVGADDVHGAPIMI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G+T + FV + +   +   +   IS+D +  T    +H+  + +++++ + G IY
Sbjct: 60  AAQKRGLTPQAFVAEIAAGRKQYLEGFHISHDYWGSTDSPENHELSQEIYRRLKNAGLIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME-------- 161
                 +Y      +  D  +       GA  QY       +A ++P + +         
Sbjct: 120 TKDVEQFYDTVKGMFLADRFIKGTCPRCGAPDQYGDNCEKCSAVYSPTEVINPYSTLSGS 179

Query: 162 ------EEGYFFRLSAYQ--DKLLSYYESHPEFILPIERRNEVIS------FVKSGLKDL 207
                    YFF+LS  +    L  +   + +  LP   + EV++           L D 
Sbjct: 180 RPELRTSTHYFFKLSDPECVKFLREWTTGNGKDGLP-RVQEEVLAKDSEWLGTDGHLTDW 238

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHV 262
            +SR    +GI IPD P    YVW+DA   YL          G     + +D     +H 
Sbjct: 239 DISRDAPYFGIAIPDAPGKYFYVWLDAPVGYLAALKAYSEKKGFDFNEFLSDPETEQVHF 298

Query: 263 IGKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           IGKDI+ FH ++WPA L  +  P   P  + +HGF+   G+K+SKS G  I P++ + ++
Sbjct: 299 IGKDIIYFHTLFWPAMLHFSGKPFRTPDHINAHGFMTVDGQKMSKSRGTGISPLQYL-DL 357

Query: 321 GVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G++A  LRY+L  ++    +D  + K    +RVN+DL     N+ SR+   I+K ++G I
Sbjct: 358 GMNAEWLRYYLAAKMNSRVEDVDFTKVDFAQRVNSDLIGKYINIASRAAGFIVKRFEGRI 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                    D  I  + SRV  E+    + +   RA   V+ L   V+ Y D +KPWEL 
Sbjct: 418 LDAAM---KDPLIERIKSRV-PEVSAFYEVREFARATRLVMELADAVNEYVDEKKPWELA 473

Query: 438 KTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKIFDILFVA 480
           K +P +A  + +V+   +E  R L + L+  +P  A ++   L +A
Sbjct: 474 K-DPAQAEALHWVSSVALECFRLLTLCLKPVLPATAERVEAFLSIA 518


>gi|86147931|ref|ZP_01066235.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834256|gb|EAQ52410.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 686

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 222/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L +   D +  ++W  D      H IGKDI+ FH++
Sbjct: 244 PGEKNKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 304 FWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPELYNEFVA 423

Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
              R+ Q  E RE        RA+ ++ +L  + ++Y D + PW L K          V 
Sbjct: 424 AAERIGQLYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVS 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P+LA +
Sbjct: 478 SVGINLFRVLMAYLKPVMPELAAR 501


>gi|14601199|ref|NP_147731.1| methionyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|7388281|sp|Q9YCY3|SYM_AERPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|5104799|dbj|BAA80114.1| methionyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 572

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 252/549 (45%), Gaps = 52/549 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  +++A  Y N  PH+G     ++ AD+ AR+ RL G  V+F +G+DEHG  I   A+ 
Sbjct: 3   KYVVTSAWPYVNHVPHLGTLIGSVLSADIYARYLRLRGRQVVFVSGSDEHGTPIELEARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  K   DQ       M     IS+D++ RT    H +      KK+ + G I+    
Sbjct: 63  KGVHPKELTDQVHEYDVKMWREYRISFDNYSRTESPVHKEFVMEFMKKLEENGYIFSQEE 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQ 158
              Y  RD+ +  D  V        Y+ A G   +                      PV 
Sbjct: 123 VLPYCERDKIFLPDRFVEGTCPYCGYEKARGDQCDECGRLLHPTELKNPRCALCGSKPV- 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +     +F  L   QD+LL + ESH E    +++ +  I++V  GLK  S++R    WG+
Sbjct: 182 YKSTRHWFIDLRRVQDRLLKWLESHGELQDSVKKYS--INWVAQGLKPRSVTRD-LSWGV 238

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPAD---LHVIGKDIL 268
             P        +YVW DAL  Y++ T  L      +P+  K+ +W +    ++ IGKD +
Sbjct: 239 PAPFKGAEGKTIYVWFDALLGYVSATKELFIMRRGDPEEWKSWWWDSGTRTVYFIGKDNI 298

Query: 269 RFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDA 324
            FHAI  PA  L+++ P  LP ++ +  +++++G++ SKS  +G  ID  E +E    D 
Sbjct: 299 PFHAIILPALFLASHDPYVLPWRISATEYLMYEGQQFSKSRRIGVWID--EALEIAPADY 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R+ L R     +D  +      + VN +L + IGN V+R +S++     G+ P P    
Sbjct: 357 WRWALARMRPEARDTNFTWKEFYRIVNTELNDDIGNFVNRVLSLVRSRMSGVAPEPEDLG 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E  +  +    R    + E+++   I RA   ++ +  E + Y +  +PW+L   + +  
Sbjct: 417 EH-QGFVERVRRAAWAVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPWKLLSQDREEG 475

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLHK 501
              L   +  ++ LA LL  F P  A++++ +L +A    E    + LD+ L PG     
Sbjct: 476 VRALSAALYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAVWDEWLDRPL-PGGARIV 534

Query: 502 TFDPIFPRF 510
             +P+F + 
Sbjct: 535 RVEPLFQKL 543


>gi|33415345|gb|AAQ18197.1| probable methionyl-tRNA synthetase [uncultured bacterium]
          Length = 701

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 241/534 (45%), Gaps = 67/534 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L+++TA+ Y N   HIGH  E I AD+  RF R  G  V F    D HG  I  AA+ A
Sbjct: 4   QLFVTTALPYANGHFHIGHIMEYIQADIWVRFQRQQGHRVHFVGADDAHGAPIMIAAEKA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I++D +  T    +H   + ++  + D G I      
Sbjct: 64  GKTPQQFVADIAAGRKPYLDGFHIAFDHWSSTDSPENHSLAKEIYVALRDAGLITVRPVE 123

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161
            ++      +  D     E  K GA  QY ++              NP   +        
Sbjct: 124 QFFDPEKSMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYAPTDLKNPYSALSGATPVRK 183

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFV------KSGLKDLSLSRKT 213
             + YFF+LS    +   + E+  +   L  E  N++  +       + GL D  +SR  
Sbjct: 184 SSDHYFFKLS--DPRCAEFLEAWTQDGKLQSEVGNKIREWFTKDENGEGGLSDWDISRDA 241

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA----------- 258
             +GI+IPD     P    YVW+DA   YL +        G KA++  A           
Sbjct: 242 PYFGIQIPDLPEGSPAKYFYVWLDAPVGYLASLKSYFAAGGPKARYGEARSFDEFIADPA 301

Query: 259 --DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
              +H IGKDI  FH ++WPA L  +   LP +V  HG +   GEK+SKS G  +DPI+ 
Sbjct: 302 VEQVHFIGKDITYFHTLFWPAMLKFSGRKLPSQVNVHGHLTVGGEKMSKSRGTGLDPIKY 361

Query: 317 IEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + ++G++   LRY++  ++    +D  ++ +    RVN+DL     N+ SR  + I K +
Sbjct: 362 L-KLGMNPEWLRYYIAAKLNSKVEDVDFNPEDFVARVNSDLVGKYVNIASRCSTFIHKYF 420

Query: 374 DGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           +G +     P  G   E    + +V SR  Q I + +  +   +AL  +++   E+++YF
Sbjct: 421 EGKLAHLDAPDEGKLQEMI-PLQAVTSREAQ-IADALDKREFGKALRDIMAAADEINQYF 478

Query: 429 DAQKPWELKKTN----PDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  KPWEL K +    P+ A   VL   +E  + L + L   +P ++ + F  L
Sbjct: 479 DTAKPWELAKDSAQHTPNSALHEVLSACIEGFKYLTLFLSPILPDVSGRAFHFL 532


>gi|20905283|gb|AAM30563.1| Methionyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 749

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 225/500 (45%), Gaps = 39/500 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    + AD+ AR  + +G +V F  G+D HG  I   A+  G+T
Sbjct: 49  VTCGLPYANGKAHIGHLRTYVPADIYARSLKKEGREVTFVCGSDTHGTPIVVNAEELGIT 108

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
               V+   ++F +    L I +D F  T +  +H+    +  ++ +KG +Y       Y
Sbjct: 109 PTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEKGYVYPKIIEIAY 168

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163
                 +  D           E  +G +      +H                P ++ ++E
Sbjct: 169 CPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEYRQQE 228

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF+LS + + L+ Y     +        N    +VK GL D  ++R   +WG+K P  
Sbjct: 229 HFFFKLSEFSNYLMDYLSK--DLGGTTNAINYARGWVKQGLTDWCITR-NLEWGVKFPGH 285

Query: 224 PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFL 279
              ++YVW+DA   Y+  T  +      S  KFW  D   +H IG DI   H I+WPA L
Sbjct: 286 EDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGDGEIVHFIGGDITYHHCIFWPAML 345

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGK 337
             A+  +P  V + G +  +  K SK+ G V+   E   + G   D LRY+L    +  K
Sbjct: 346 KGADYSVPTAVVASGMVKIEDRKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYTSHTK 405

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +  +    L++++NA+L   +GN + R++    K+Y  +        E +  I     + 
Sbjct: 406 ELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEV-----PEGEVEPEIRKEIEKA 460

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L E++  M+     +A+   ++L S  + YF + +PW+L K + D    V+Y  + + + 
Sbjct: 461 LVEVKAAMEEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRDACGQVVYNCLHLAKA 520

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L+++ +  +P+   K +  L
Sbjct: 521 LSLIFEPVIPQTMEKAWKGL 540


>gi|254410100|ref|ZP_05023880.1| methionyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196183136|gb|EDX78120.1| methionyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 576

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 234/523 (44%), Gaps = 45/523 (8%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +RF R +G  VLF   TDEHG     AA  AG+
Sbjct: 21  ITSALPYINGIKHLGNLVGSMLPADVYSRFLRQEGESVLFICATDEHGTPAELAALEAGL 80

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      ++     +S+D F RT+   HH+  +  ++++ + G + +      
Sbjct: 81  DVTTYCQKQHERQAEIYRGFGLSFDYFGRTSSPDHHELTQHFYQRLDENGFMEEREIRQV 140

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHN------PVQWMEEEG------------ 164
           YS  D  +  D  +     Y G D    +   N      P   +E               
Sbjct: 141 YSHEDNRFLPDRYIVGTCPYCGYDRARGDQCENCTSVLDPTDLIEPRSAVSGSTNLEVRT 200

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               F +L+   D++ S+ ++  E+      R+  + ++  GL+D  ++R    WG+ +P
Sbjct: 201 TKHLFLKLTTLSDEVRSWVDNQQEWTTLT--RSIALKWLNEGLQDRCITRD-LSWGVPVP 257

Query: 222 DDPQY---IMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD------LHVIGKDILRF 270
             P +   + YVW DA   Y++ T    N   +    K W  D      +  + KD L F
Sbjct: 258 R-PGFEGKVFYVWFDAPIGYISATKGWANQQAEADNWKSWWYDSQDIRHVQFMAKDNLPF 316

Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H I WPA +L    P  +   +    ++ + G K S S    I   + +E V  D  RY 
Sbjct: 317 HTIMWPAMILGTREPWTMADDIKGFNWLTYYGGKFSTSSKRGIFSDQALEIVPADYWRYA 376

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+       D  +  +  + ++N DLA+ +GN V+R +      + G+IP  G   E+++
Sbjct: 377 LIAMSPESADSAFTWELFQIKINKDLADNLGNFVNRILKFANSRFKGVIPEGGTPGEAEQ 436

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +   C  ++ ++   +QN    +A   + +L +  ++Y D + PW L K N + A+ V+
Sbjct: 437 RLQESCESLITKLSNCLQNLEFRKAAETLCALWTVGNQYIDERAPWALFKQNKEEAALVI 496

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             ++ +IR  AI    F+P  A KIFD L +++  R  Q L Q
Sbjct: 497 RTSINLIRLYAIASNPFIPFTAEKIFDALQLSETERT-QRLTQ 538


>gi|293189064|ref|ZP_06607793.1| methionine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292822011|gb|EFF80941.1| methionine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 576

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 228/497 (45%), Gaps = 60/497 (12%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DVL  +GTDEHG  I  AA  AGV+ +   DQN+R   +    L +SYD F RTT 
Sbjct: 1   MAGHDVLMVSGTDEHGTPILVAADGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTA 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVYKGADG----QY 149
             H+   + ++  + D G + +         S   +L D  Y        GA+G    Q 
Sbjct: 61  GNHYRVVQDMFATVRDNGYMIEKVTRAAISPSTGRTLPDR-YIEGTCPICGAEGARGDQC 119

Query: 150 YNA--QHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
            N   Q +P +              ++E   YF  L A  D L ++ +   +       R
Sbjct: 120 DNCGNQMDPTELINPHSRINGETPNFVESTHYFLDLPALADALSAWLDEREKSGT---WR 176

Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP---DDPQYIMYVWIDALTNYLTTT----GY 244
             VI F ++ L+D+     T   DWGI +P   D P   +YVW DA+  YL+ +      
Sbjct: 177 PNVIKFSQNFLEDIRPRAMTRDIDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARR 236

Query: 245 LDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------LPL 286
             +P+  + K+W  P  L  + +GKD + FH+  WPA LL  N              L L
Sbjct: 237 TGDPEAWR-KWWNDPEALTYYFMGKDNIVFHSQIWPAELLGYNGQGAKGGAPGDLGVLNL 295

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P +V S  F+  +G+K S S G VI   + +     DALRYF+        D  +     
Sbjct: 296 PTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEF 355

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +R N +L  G GNLV+R+ SMI K + G IPTPG   + D ++L       + +   ++
Sbjct: 356 VRRTNGELVAGWGNLVNRTASMIAKKF-GEIPTPGELEDIDRALLDAVEAGFETVGNLIR 414

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAF 465
           +     AL++ + LV E ++Y    +P++LK      R +TVL+   + +  L ++L  F
Sbjct: 415 HHRQKAALSEAMRLVGEANKYVTDTEPFKLKAPEQQQRLATVLWTLAQAVTDLNLMLSPF 474

Query: 466 VPKLANKIFDILFVADE 482
           +P  AN I  ++  A E
Sbjct: 475 LPHAANDIDRVMGGAGE 491


>gi|260913818|ref|ZP_05920293.1| methionyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325]
 gi|260632131|gb|EEX50307.1| methionyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325]
          Length = 682

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 243/536 (45%), Gaps = 55/536 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   A   G
Sbjct: 8   ILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHNVYFICADDAHGTPIMLNADKLG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  + ++  +     +  +ISY+++  T    +      ++KK+   G I     S 
Sbjct: 68  ITPEELIAKSKADHVADFEGFNISYNNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQ 127

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------------- 160
            +   ++  +  D   KG      A+ QY       ++ ++P + +              
Sbjct: 128 LFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L A++  L  + +S     L  E  N++  + +SGL+   +SR    +G KI
Sbjct: 187 DSEHFFFDLPAFEGMLKEWIKSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGFKI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L +  G     FW  D      H IGKDI+ FH+++
Sbjct: 244 PDTEDKYFYVWLDAPIGYMASFKNLCDKSGLNFDDFWKKDSTAELYHFIGKDIVYFHSLF 303

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L   +L  P  VF+HG++   G K+SKS G  I     +  +  + LRY+   ++ 
Sbjct: 304 WPAMLEGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLN 363

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D   + +   +R+NAD+ N   NL SRS   I K +DG +    A    D ++L+ 
Sbjct: 364 NRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIA----DPALLAE 419

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                 +I    + +   + + +V+ L  + ++Y D + PW + K     A   T+  + 
Sbjct: 420 FVEKSTQIANYYEEREFGKVVREVMLLADKANKYIDDKAPWVIAKEEGRDAELQTICSMA 479

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRLKP 495
           +++ R LAI L+  +P++  +    L             +  +   F++L QRL+P
Sbjct: 480 LQLFRVLAIYLKPVIPQIIERAEAFLQDELSWESLNAPLLNHQILPFKALAQRLEP 535


>gi|121611392|ref|YP_999199.1| methionyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|187647777|sp|A1WRC4|SYM_VEREI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121556032|gb|ABM60181.1| methionyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 691

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 229/524 (43%), Gaps = 50/524 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MPSTRKLFVTTALPYANGPFHLGHLMEYIQADIWVRFQRMQGHEVNFVGADDTHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-- 118
           AA+ AG T + FV   +   +   D   +S+D++  T    +H+  R +++ + D+ D  
Sbjct: 61  AAEKAGKTPQQFVADIAAGRKPYLDGFHLSFDNWHSTDAPENHELARQIYRDLRDRADGS 120

Query: 119 -IYKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME----- 161
            I +     ++      +  D  +             G + +   + + P + ++     
Sbjct: 121 LIERRSIEQFFDPGKSMFLPDRYIVGECPRCHAKEQYGDNCEQCGSVYAPAELIDPVSAL 180

Query: 162 ---------EEGYFFRLS-----AYQDKLLSYYESHPEFILPIER----RNEVISFVKSG 203
                     E +FF+LS      +  +     +  PE    +      R+        G
Sbjct: 181 SGAKPELRSSEHFFFKLSDPRCVEFLQRWTQDGKLQPEVANKVREWFGLRSNPDGSCSEG 240

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---- 259
           L D  +SR    +GI+IPD P    YVW+DA   YL     L    G     + AD    
Sbjct: 241 LDDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLAALKNLLEKRGQNYDAYMADPALE 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FH ++WPA L  +    P  VF HGF+   GEK+SKS G  +DP++ + 
Sbjct: 301 QYHFIGKDIVTFHTLFWPAMLHLSGRKTPDNVFVHGFLTINGEKMSKSRGTGLDPLKYL- 359

Query: 319 EVGVDA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +G++A  LRY+L  +++   +D     +    RVN+DL     N+ SR+   + K + G
Sbjct: 360 SLGMNAEWLRYYLATKLSARNEDMDLGTEDFMVRVNSDLIGKYVNIASRAAGFLTKRFAG 419

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            + +   F  +  ++L+        I +  Q +   +A  +++ L  +V+ Y D  KPWE
Sbjct: 420 RLTSD--FGAAGLALLADLHGARDTIAQWYQAREFGKATREIMLLADKVNAYVDRNKPWE 477

Query: 436 LKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L K   N      V  V +     L   L   +P LA    D +
Sbjct: 478 LAKDAANGQALHQVCSVLINAFATLTRYLSPVLPALARAAQDFV 521


>gi|319896964|ref|YP_004135159.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432468|emb|CBY80824.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 684

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L + +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDETLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|332141410|ref|YP_004427148.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551432|gb|AEA98150.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 675

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 225/514 (43%), Gaps = 57/514 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ ++ +++A+ Y N   H+GH  E I  D+  RF RL G +       D HG  +  
Sbjct: 1   MSEKRRILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRLRGNECYSVCADDAHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ  G+T +  V +  + + +D+ D   ++YD++  T    +   C  ++ ++ + G I
Sbjct: 61  KAQELGITPEEMVARTRAEHHQDLVD-FHVNYDNYYVTHSPENKAFCEEIYTRLDNAGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQ------YYNAQHNPVQ---------- 158
            K   +  +    E +  D  V       GA+ Q         A ++P +          
Sbjct: 120 SKRTINQLFDPEKEMFLPDRFVKGTCPSCGAEDQNGDSCDVCGATYSPTEVKNPRSVVSG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L  ++  L  +  S     L  E  N++  +   GL+   +SR   
Sbjct: 180 ATPVLRESEHFFFDLPKFEGMLKEWIRSG---ALQEEMANKLQEWFTEGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP  P    YVW+DA   Y+ +   + D  +     FW AD      H IGKDI 
Sbjct: 237 YFGFEIPGAPNKFFYVWVDAPVGYMASFKNFCDQNNLEFDDFWKADSEAELYHFIGKDIT 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HGF+   G K+SKS G  I     ++ +  + LRY+
Sbjct: 297 YFHCLFWPAMLEGAGYRKPTGVNIHGFVTVNGAKMSKSRGTFIKGRTYLDHLNPEYLRYY 356

Query: 329 LVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
              ++    DG  D D       ++VN+DL   + N+ SR  S I K +DG +       
Sbjct: 357 FASKLG---DGVTDIDLNFTDFAQKVNSDLVGKVVNIASRCASFITKRFDGKL------- 406

Query: 385 ESDESILSVCSRVLQEIRENM----QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            SD  I        Q   E++    + +  H+A+ ++++L  + +++ D   PW   K  
Sbjct: 407 -SDNVIEPELIAEFQNASESIAALFEKRKYHQAVREIMALADKANQFIDNNAPWVTIKDE 465

Query: 441 PDRAST--VLYVTVEVIRQLAILLQAFVPKLANK 472
             +  T  V  + + + R L I L+  +P LA K
Sbjct: 466 TKQQFTHDVCSLGINMFRLLVIYLKPVLPVLAEK 499


>gi|229072522|ref|ZP_04205724.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228710498|gb|EEL62471.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 544

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 237/511 (46%), Gaps = 41/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R+ G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRVKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D           E  +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273
               +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH++
Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL   
Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N++L    GN V+R++  I K Y G++P      E  + +  
Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKVEG 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y  V
Sbjct: 420 LYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +I   A LL+ F+P  + ++ + L + + N
Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506


>gi|218709003|ref|YP_002416624.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782875|sp|B7VLW8|SYM_VIBSL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218322022|emb|CAV18060.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 686

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 222/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L +   D +  ++W  D      H IGKDI+ FH++
Sbjct: 244 PGEKDKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 304 FWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPELYNEFVA 423

Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
              R+ Q  E RE        RA+ ++ +L  + ++Y D + PW L K          V 
Sbjct: 424 AAERIGQLYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVS 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P+LA +
Sbjct: 478 SVGINLFRVLMAYLKPVMPELAAR 501


>gi|46143801|ref|ZP_00133908.2| COG0143: Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126207836|ref|YP_001053061.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126096628|gb|ABN73456.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 675

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 233/501 (46%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKADHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------------- 160
            +    + +  D  V KG      A+ QY +      + ++P+  +              
Sbjct: 121 LFDPEKQMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAISGATPIVK 179

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G  I
Sbjct: 180 ESEHFFFDLPNFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAIY 274
           PD      YVW+DA   Y+ +   L +  G    +FW  D      H IGKDI+ FH+++
Sbjct: 237 PDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSLF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 297 WPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLN 356

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ + 
Sbjct: 357 ERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADKLEDEALFAE 412

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
                ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K     A    V  + 
Sbjct: 413 FIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMG 472

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +P+LA +
Sbjct: 473 IELFRVLMSYLKPVLPQLAER 493


>gi|229020277|ref|ZP_04177046.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229026501|ref|ZP_04182856.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228734809|gb|EEL85449.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228741030|gb|EEL91259.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 544

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 56/541 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEVADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGLCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++ +  E   +       R+  I     ++K GL+D ++SR     G+
Sbjct: 183 EHFYFALHKFQQQIKAAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + +  + +  + +  +FW  D    +V GKD + F
Sbjct: 239 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETEKADQEFWDRDAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K YDG++P      E  E 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPKGIINVELKEK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           I      + + + E ++      AL  +   V   ++YFD ++PW+ ++  P      +Y
Sbjct: 417 I----EGLYKNVGELIEQAKFKVALETIFDAVRFANKYFDEKQPWKQREDAPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             V +I   A LL+ F+P  + K+ +IL +   N          KP   L    D + P 
Sbjct: 473 NCVYLIANFANLLEPFLPFSSEKVRNILSIVKRN---------WKPQNTLPNRIDSVQPL 523

Query: 510 F 510
           F
Sbjct: 524 F 524


>gi|293609112|ref|ZP_06691415.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292829685|gb|EFF88047.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 688

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 240/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVAYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  D G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNRDAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFSEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A T+  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAQCAETDLVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|296109584|ref|YP_003616533.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434398|gb|ADG13569.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 639

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 245/500 (49%), Gaps = 44/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+AY N   H+GH     I AD+L ++ +L G +V+   GTD HG  I   A+  G 
Sbjct: 4   ITTALAYTNGPLHLGHVRSTYIPADILYKYLKLRGEEVIHVGGTDNHGVPILLRAEKEGK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             +  V+   +  ++  D L I +D F +T  + H  T +  + K+ + G IY+     +
Sbjct: 64  KPEEIVEYYHKRIKEDLDSLGIEFDVFGKTHSEIHIKTAQEFYLKLVENGYIYEKEIEQF 123

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQH-----NPVQWMEEEG------------- 164
           Y    + +  D  V     Y G + +  + +       P +  E                
Sbjct: 124 YCENCKKFLPDRYVEGLCPYCGGEARGDHCESCGRHLEPFELREPYCVICGSKNLKVKKS 183

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             YFF+LSA +++L +Y ++  E  +P   +N  ++++K  L D  +SR    WG+ IP 
Sbjct: 184 IHYFFKLSALKEELENYIKNAKE--MPEHVKNLALNWIKE-LHDWDISR-DIPWGVPIPG 239

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAF 278
             + +MYVW++A   Y++ T  L   +    K+W        H IGKDI   HA++WP  
Sbjct: 240 TDK-VMYVWLEAPIGYISFTKMLG--EEYYKKYWLNKDSKIYHFIGKDITVHHAVFWPGM 296

Query: 279 LLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L++ ++  LP  V S G++  +G+K+S S G VI   + +E+   D LRY+LV      K
Sbjct: 297 LIAHSSYNLPSAVISGGYLTLEGKKMSTSKGWVIWIKDFVEKFDSDYLRYYLVMAAPLFK 356

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +  +  +K+VN +L N IGN   R ++     Y      P    E  E IL +    
Sbjct: 357 DCDFSLEEFQKKVNNELINIIGNFTHRVLTFT---YRKCKKVPLVEIEESE-ILKLIDET 412

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++E  + ++      AL +V+ L  + + YF  ++PW +K  + ++   VLY++ ++++ 
Sbjct: 413 VEEYDKLIREFKFRDALNKVLHLAIKGNEYFQKEEPWNIK--DEEKLKEVLYLSCKLVKA 470

Query: 458 LAILLQAFVPKLANKIFDIL 477
           ++ LL  ++P  + ++ +I+
Sbjct: 471 ISYLLYPYMPNKSRELLNIM 490


>gi|320325637|gb|EFW81699.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327080|gb|EFW83094.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330876900|gb|EGH11049.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 682

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 237/546 (43%), Gaps = 49/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD L + +D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFL-VDFDNFHSTHSDENRELSSMIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                + ++    + +  D    KG      A+ QY        A + P           
Sbjct: 120 ATRSVTQYFDPEKKMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF L  +   L S+  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GTTPVLKDSKHFFFDLPTFDAMLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKD 266
             +G +IPD+P    YVW+DA   Y+ +   L    PD     +W         H IGKD
Sbjct: 236 PYFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E
Sbjct: 356 YYYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D 
Sbjct: 416 LTDAFLAAAP----SIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
              V  + + + RQL I L+  +P L   A K  ++  +  E+      + +L P   L 
Sbjct: 472 VQAVCSLGINLFRQLVIFLKPVLPNLAADAEKFLNVEPLTWEDHKTLLGNHQLNPFSALM 531

Query: 501 KTFDPI 506
              DP+
Sbjct: 532 TRIDPL 537


>gi|229049724|ref|ZP_04194281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|229112480|ref|ZP_04242017.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228670860|gb|EEL26167.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228722637|gb|EEL74025.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 544

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|228473672|ref|ZP_04058422.1| methionine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274886|gb|EEK13701.1| methionine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 690

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 241/510 (47%), Gaps = 39/510 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+
Sbjct: 3   ERYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+ ++  +D      IS+D++ RT+   H+ T    ++ + DKGD  +  
Sbjct: 63  KEGTTPQEIIDKYNKIIKDSLFDFGISFDNYSRTSLPIHYQTASEFFRTLYDKGDFIEET 122

Query: 124 YSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWM------ 160
               Y  +   +  D  V     K  + + Y  Q              NP   +      
Sbjct: 123 SEQLYDEQAGQFLADRFVIGTCPKCGNEEAYGDQCERCGTSLNATDLINPKSTLTGSKPV 182

Query: 161 --EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             + + +F  L  Y + L  +  E H     P     +V S++  GL+  +++R   DWG
Sbjct: 183 LRQTKHWFLPLQDYTEFLEKWIIEGHKNDWKP-NVYGQVKSWIDDGLRPRAVTRD-LDWG 240

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + F
Sbjct: 241 IPVPVEGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDKKTKLIHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRY 327
           H I +PA L +  +  LP+ V ++ F+  +G K+S S    +   E +EE     D LRY
Sbjct: 301 HCIIFPAMLKAEGSYILPENVPANEFLNLEGNKLSTSKNWAVWLNEYLEEFPSQQDTLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            +       KD  +     + R N +L    GN ++R + +  K Y G++P+ G  T+ D
Sbjct: 361 VITANAPETKDNDFTWKDFQARNNNELVAIYGNFINRVMVLTDKYYKGVVPSVGELTQVD 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             + +    ++Q+I ++++      A  +++++    ++Y   ++PW+L K +P R  T+
Sbjct: 421 REVFAQIKELIQKIEQSLERYRFREAQQELMNIARLGNKYLADEEPWKLIKEDPKRVETI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y+ + +   LA+  + F+P  + K+  +L
Sbjct: 481 MYIALHIATALAVTSEPFLPFTSEKLKRML 510


>gi|298207410|ref|YP_003715589.1| methionyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850046|gb|EAP87914.1| methionyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 690

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 230/521 (44%), Gaps = 37/521 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DVLF  G+DEHG  I 
Sbjct: 1   MTTPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGEDVLFVCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +   +   IS+D++ RT+ K HHDT    ++ +      
Sbjct: 61  IKAKKEGVTPQDVVDKYHTIIKKSFEDFGISFDNYSRTSAKIHHDTASEFFENLYKNDKF 120

Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160
            +      Y      +  D           +E   G   +     HN    +        
Sbjct: 121 IEEVTEQLYDPGANQFLADRFVVGTCPKCGNEESYGDQCESCGTSHNATDLINPKSAISG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L  Y+D L  +     +         +  S++  GL+  +++R   
Sbjct: 181 AKPILKETKHWFLPLDQYEDYLKDWILKDHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-L 239

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y++ T       G     +W  +    LH IGKD 
Sbjct: 240 DWGIPVPVKGADGKVLYVWFDAPIGYISATKEWAQAKGKDWEPYWKNEDTKLLHFIGKDN 299

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +  +  +P  V ++ F+  +G K+S S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPSMLKAEGSYIMPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPGQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R V +  K Y G +P P  ++
Sbjct: 360 LRYALTANAPETKDNDFTWADFQARNNNELVAVFGNFINRVVVLTNKYYGGDVPEPSTYS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE  L+        I  +++      A   ++ +    ++Y   ++PW+  KT+ +R 
Sbjct: 420 EIDEQTLTELKTYPDVIASSLERYRFREAQKLLMDVARLGNKYLADEEPWKTAKTDAERT 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            TV+YV +++   LA L + F+P  +NK+ DIL +  ++  
Sbjct: 480 KTVMYVALQIAAALATLSEPFLPFTSNKLKDILNLTSQDSA 520


>gi|229082281|ref|ZP_04214744.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228700713|gb|EEL53236.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 544

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 237/511 (46%), Gaps = 41/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D           E  +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273
               +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH++
Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL   
Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N++L    GN V+R++  I K Y G++P      E  + +  
Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKVEG 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y  V
Sbjct: 420 LYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +I   A LL+ F+P  + ++ + L + + N
Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506


>gi|196040453|ref|ZP_03107753.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
 gi|196028585|gb|EDX67192.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
          Length = 544

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I +IL + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNILSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|152986766|ref|YP_001347028.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|187647743|sp|A6V1U3|SYM_PSEA7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150961924|gb|ABR83949.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 679

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 232/521 (44%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ + G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWMEEEG--- 164
                + ++   D+  +  D   KG             + +   A + P +  + +    
Sbjct: 120 DTRPVTQYFD-PDKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR  
Sbjct: 179 GATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKD 266
             +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H IGKD
Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMASFRNLCARRPELDFDAFWGKDSGAELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLR 355

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPG 381
           Y+   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P 
Sbjct: 356 YYYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP- 414

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                   +L+        I E  + +  +RA+ ++++L    + +   Q PW L K   
Sbjct: 415 -------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEG 467

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 468 QQDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|50083984|ref|YP_045494.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|68565979|sp|Q6FE36|SYM_ACIAD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49529960|emb|CAG67672.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 685

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 243/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  K   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEKQIANVQQEHIRDF-DGFGVHFDHYDSTHSAENKVRSEDIYLKNREAGNIAVRPI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +    + + +D    KG      A+ QY          YNA    NP   +      
Sbjct: 122 TQLFDPEKQMFLSD-RFIKGTCPKCKAEDQYGDACEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFGEYLQKW--TRDEGRLPVSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    P+ +   +W  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPELNFDDYWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A  E  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSANCAEPELVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
            +     + Q  E RE         A+ ++++L  + ++Y D +KPW L K      +  
Sbjct: 419 FIDAGDSIAQAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVH 472

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLDQR 492
            V  V + + RQLAI L   +P LA ++        FD      + +A E   FQ L QR
Sbjct: 473 NVCSVGINLFRQLAIYLSPVLPTLAAQVQAFLQLESFDFASRQQILLAHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|33152186|ref|NP_873539.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|68565995|sp|Q7VMC9|SYM_HAEDU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33148408|gb|AAP95928.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 684

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 237/507 (46%), Gaps = 43/507 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I  
Sbjct: 1   MSNKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHQVYFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  + +   +        +IS+D++  T  + + +    ++K + DKG I 
Sbjct: 61  NAAKQGITPEQLIAKAKADHIADFQSFNISFDNYHSTHSEENRNITTAMYKTLRDKGLIK 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM-------- 160
               S  +    + +  D  V KG      A+ QY +      + ++P+  +        
Sbjct: 121 TRVISQLFDPEKQMFLPDRFV-KGTCPKCQAEDQYGDNCEVCASTYSPMDLINPHSVVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E +FF L  ++  L ++  +H   + P +  N++  + +SGL+   +SR   
Sbjct: 180 ATPIVKQSEHFFFDLPNFEAMLKTW--THSGSLQP-QIANKMQEWFESGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD-----LHVIGKDIL 268
            +G  IPD      YVW+DA   Y+ +   L +  G +  +FW  +      H IGKDI+
Sbjct: 237 YFGFPIPDTENKFFYVWLDAPIGYMASFKNLCDRTGLNYEEFWQKESKTELYHFIGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L   +   P  +F+HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 297 YFHSLFWPAMLEGCDQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYY 356

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + D   +RVN+D+ N + NL SR+ S I K + G +    A    D
Sbjct: 357 YAAKLNERIEDLDLNLDDFVQRVNSDIVNKLVNLASRNASFITKRFAGNL----ADKLED 412

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
           E++ +        I ++ + +  ++A+  ++ L  + ++Y D + PW + K     A   
Sbjct: 413 EALFAEFVAQASNIADHYEAREYNKAIRLIMDLCDKANKYVDDKAPWVIAKQADREAELH 472

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            V  + +E+ R L   L+  +P+LA +
Sbjct: 473 AVCSMGIELFRILISYLKPVLPQLATR 499


>gi|317124049|ref|YP_004098161.1| methionyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588137|gb|ADU47434.1| methionyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 607

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 231/527 (43%), Gaps = 59/527 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   KVLSAVAWPYTNGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVLAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ +R        L +SYD F RTT   H+   + L+      G + +   
Sbjct: 63  EGMTPQEVTDKYNRVIATDLTELGLSYDLFTRTTTANHYAVSQELFSGNWRNGYMIEQTT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QW 159
            G  S        D  +        Y  A G   +   N +                 ++
Sbjct: 123 KGAISPSTGRTLPDRYIEGTCPICGYGEARGDQCDNCGNQLDAEELINPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWG 217
           +E + +F  L A    L  + +           R  VI F ++ L D+     T   DWG
Sbjct: 183 IETQHFFLDLPALATALAEWLDGREGSGT---WRPNVIKFARNLLDDVRPRAMTRDIDWG 239

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVI-----GK 265
           I IP     D+    +YVW DA+  YL+ +       G   ++  W  D   +     GK
Sbjct: 240 IPIPLEGWQDNTHKRLYVWFDAVVGYLSASIEWARRVGDPERWREWWNDPEAVSYYFQGK 299

Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FHA  WPA LL                 L LP +V +  F+  +G++ S S G+VI
Sbjct: 300 DNITFHAQIWPAELLGYAGLGEKGGSAGAYGTLNLPTEVVASEFMTMEGKQFSTSRGHVI 359

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +V+E  G D LRYF+       +D  +      +R N++L  G GNLV+R+ SMI K
Sbjct: 360 YVRDVLERYGPDPLRYFICAAGPENQDSDFTWAEFIQRNNSELVAGWGNLVNRTASMIAK 419

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            + G IP  G     DE++L+        +   ++ Q   + + +V+ +V E +RY    
Sbjct: 420 SF-GEIPAAGPLEPVDEALLTAVREAFDVVGGLIERQRFKQGIGEVMRVVGEANRYVAET 478

Query: 432 KPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +P++LK  +  +R  TVL+V  + +  +  L+  F+P  +N++  ++
Sbjct: 479 EPFKLKGDDERERLGTVLHVLAQAVVSINTLMAPFLPHGSNRVHRVM 525


>gi|254448547|ref|ZP_05062007.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261930|gb|EDY86215.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 680

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 228/512 (44%), Gaps = 43/512 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R ++ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I  
Sbjct: 1   MSDRRRILMTSALPYANGSIHLGHMVEYIQTDIWSRYQKLRGHECYYVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ GVT +  +++  +  R D AD  +I +D +  T    + +    ++  + + G I
Sbjct: 61  KAQSEGVTPEQLIEKIGQEHRADFAD-FNIGFDHYHVTHSPENRELSSQIYLALREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPVQWM-------- 160
           +       Y    + +  D     D    G+D QY        A + P +          
Sbjct: 120 HSRVIEQAYDPEAKMFLPDRFIKGDCPKCGSDDQYGDSCEKCGATYQPTELKNPHSVISG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF+L  ++  L  + +        + + NE   + +SGL+D  +SR   
Sbjct: 180 ATPITKESEHFFFQLKDFEAFLQQWMQDSDVQSGVVNKMNE---WFESGLQDWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDIL 268
            +G +IPD P    YVW+DA   Y+ +   L +  G    +FW AD      H IGKDI 
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPVGYMASFRKLCSDQGIDFDQFWAADSDAELYHFIGKDIA 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  VF HGF+   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 297 YFHTLFWPAMLKGAGFRPPSGVFCHGFLTVDGQKMSKSRGTFIKARTYLDHLSPEYLRYY 356

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++  G +D     +  ++RVN+DL   + N+ SR    + K  +G +    +     
Sbjct: 357 FAAKLGAGLEDIDLSLEDFRQRVNSDLVGKVINIASRCAGFVKKLGEGQL----SAQLGR 412

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           + +    +     I +  + +    A+ Q++ L    + +    +PW L K     D   
Sbjct: 413 QDLFDQAASASANIADLYEARNYREAMRQIMHLADTANTFIAEAEPWVLAKQEGKQDDVV 472

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+    + + RQ+ + L+  +P+LA  +   L
Sbjct: 473 TICSDGINLFRQIIVYLKPVLPELARGVEQFL 504


>gi|71027023|ref|XP_763155.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350108|gb|EAN30872.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 691

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 151/257 (58%), Gaps = 7/257 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++++AIAY N  PH+GHAYE +I DV++R++R+ G  V+F+TGTDEHG K+  
Sbjct: 93  LENKKPYHLASAIAYTNGLPHVGHAYEAVICDVISRYYRMFGRRVIFSTGTDEHGIKVLT 152

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T     D  S  F+   + L + YD FIRTT + H    + +W+ +  KGDIY
Sbjct: 153 TAKQQNKTPIEVCDYYSNEFKKFYERLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIY 212

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+R+E +  + E  K  D +       P   M E  YFF +  Y+  L+ Y 
Sbjct: 213 LGEYNGYYSMREERFIPNTEA-KLTDFK-DPVSGKPYDLMSESSYFFTMERYRTPLVEYI 270

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            ++ +FI P + RNE+++ +K  L DLS+SR +FDWGI++P     ++  +++   N   
Sbjct: 271 STNQDFIYPKKVRNEILTRLKDQLDDLSISRTSFDWGIEVPSTDDIVITEYVNNDVN--- 327

Query: 241 TTGY-LDNPDGSKAKFW 256
             GY  DN   +++KF+
Sbjct: 328 -LGYNHDNKLFNESKFY 343



 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 144/251 (57%), Gaps = 9/251 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           +++MYVW DAL+ Y+T++G  ++   S+  +WP DL VIGKDI  F ++       S  L
Sbjct: 404 KHVMYVWFDALSFYMTSSGLGESL--SEMTYWPTDLQVIGKDISWFQSVILATMCFSMGL 461

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           PL +K+ +HGFI    G K+SKSLGNV++  E+++EVGV++ RY+L++    G D  +D+
Sbjct: 462 PLTRKILAHGFIQGSDGRKMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVMGSDVNFDQ 521

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + LK+  N+DLA+ +GNLV R  S++ K  +G++P+  +  +S    +      ++E  +
Sbjct: 522 NQLKEMHNSDLADNVGNLVHRLTSLVTKYNEGVLPSYKSKVKSPFDFV----EFMKECSD 577

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +    I+  L        +++ Y     PW  K  N D+  +VL V +E +  LA  L 
Sbjct: 578 YVLKLDIYNVLMLTNMKFKDLNNYLTVTTPWAEK--NQDKRDSVLRVLLESVYFLAHFLY 635

Query: 464 AFVPKLANKIF 474
             +P+   ++F
Sbjct: 636 PVLPQSMERLF 646


>gi|161485679|ref|NP_632891.2| methionyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|25009360|sp|Q8PYJ4|SYM_METMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 715

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 226/502 (45%), Gaps = 39/502 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N + HIGH    + AD+ AR  + +G +V F  G+D HG  I   A+  G
Sbjct: 13  VLVTCGLPYANGKAHIGHLRTYVPADIYARSLKKEGREVTFVCGSDTHGTPIVVNAEELG 72

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T    V+   ++F +    L I +D F  T +  +H+    +  ++ +KG +Y      
Sbjct: 73  ITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEKGYVYPKIIEI 132

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWME 161
            Y      +  D           E  +G +      +H                P ++ +
Sbjct: 133 AYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEYRQ 192

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E +FF+LS + + L+ Y     +        N    +VK GL D  ++R   +WG+K P
Sbjct: 193 QEHFFFKLSEFSNYLMDYLSK--DLGGTTNAINYARGWVKQGLTDWCITR-NLEWGVKFP 249

Query: 222 DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
                ++YVW+DA   Y+  T  +      S  KFW  D   +H IG DI   H I+WPA
Sbjct: 250 GHEDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGDGEIVHFIGGDITYHHCIFWPA 309

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
            L  A+  +P  V + G +  +  K SK+ G V+   E   + G   D LRY+L    + 
Sbjct: 310 MLKGADYSVPTAVVASGMVKIEDRKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYTSH 369

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  +    L++++NA+L   +GN + R++    K+Y  +        E +  I     
Sbjct: 370 TKELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEV-----PEGEVEPEIRKEIE 424

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + L E++  M+     +A+   ++L S  + YF + +PW+L K + D    V+Y  + + 
Sbjct: 425 KALVEVKAAMEEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRDACGQVVYNCLHLA 484

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           + L+++ +  +P+   K +  L
Sbjct: 485 KALSLIFEPVIPQTMEKAWKGL 506


>gi|323493149|ref|ZP_08098280.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312620|gb|EGA65753.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 686

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 219/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWME------------- 161
             +    E +  D            E   G +       ++P + ++             
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDSCGETYSPTELIDPKSAVSGATPVMK 186

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 187 DSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH++
Sbjct: 244 PGEKDKFFYVWLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 304 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYNEFVA 423

Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
              R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 424 AAGRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P+LA +
Sbjct: 478 SVGINLFRVLMTYLKPVMPELAAR 501


>gi|158317640|ref|YP_001510148.1| methionyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113045|gb|ABW15242.1| methionyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 565

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N  PH+GH A   + AD+ AR+ R+ G  VL  +G+D HG  I   A   
Sbjct: 19  VLVAVAWPYANGAPHLGHIAGAYLPADIFARYQRMAGNRVLMVSGSDAHGTPITVRADEE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +  VD+    F  +   L IS+D F  T    H    + ++ ++ + G IY    S
Sbjct: 79  GVSPQEIVDRYHPEFLRIWSELGISFDLFTSTRTDNHSAVAQDVFTRLREAGYIYAKETS 138

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH---------------NPVQWME 161
            +Y      +  D  V        Y+ A G Q  N                    V  M 
Sbjct: 139 QFYDPDAGRFLPDRYVVGTCPHCSYQQARGDQCENCGRTLDPELLIDPRSKVTGAVPEMR 198

Query: 162 EEGYFF-RLSAYQDKLLSYYESHPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWG 217
           +  +FF RLS+  D+LL + ++   +     RR   N  + FVK GL D +++R   DWG
Sbjct: 199 QTTHFFLRLSSLADQLLDWLQTRQGW-----RRHVLNWSVQFVKDGLHDRAITRD-LDWG 252

Query: 218 IKIPDD---PQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKD 266
           + +P D   P   +YVW +A+  YL+ +        +P+  +A +W     A  + +GKD
Sbjct: 253 VPLPTDELGPGKRLYVWFEAVIGYLSASKEWAAASGDPEAWRA-WWEDPEAAAYYFVGKD 311

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            + FH + WPA L+    L LP  V ++ ++   G K SKS G      E ++ +  DAL
Sbjct: 312 NIPFHTVIWPAMLIGYGGLNLPTDVPANQYVTFGGAKASKSAGIGRGVREYLDLLQPDAL 371

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ L   +    D       + +RVN +L    GNLV+R ++ I K +DG +P  G    
Sbjct: 372 RFALASVLPEQNDTEISDADIIRRVNDELIANWGNLVNRVLAQINKFFDGELPETGELDG 431

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
              ++L      L  + E +       AL   + + +EV+ Y   ++PW+  K +   A+
Sbjct: 432 VHAALLDSVDAGLVRVGELLGKVEQRAALRAAMEISAEVNAYLYREEPWKTVKVDRAAAA 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             L V+++ I  +   L  F+P  ++++ ++L +
Sbjct: 492 RSLAVSIQAISGITTALAPFLPFSSDRVAEVLGI 525


>gi|163802868|ref|ZP_02196757.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173408|gb|EDP58231.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 686

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 223/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161
             +    E +  D  V KG      ++ QY +   N      P + +E            
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATPVM 185

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N  DG    ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGEKNKFFYVWLDAPVGYMASFKNLCNKTDGLDFDEYWKKDSSAELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
           +   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 TAAGRIAELYETRE------FSRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             V + + R L   L+  +P LA +
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAAR 501


>gi|154489135|ref|ZP_02029984.1| hypothetical protein BIFADO_02449 [Bifidobacterium adolescentis
           L2-32]
 gi|154083272|gb|EDN82317.1| hypothetical protein BIFADO_02449 [Bifidobacterium adolescentis
           L2-32]
          Length = 620

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 246/530 (46%), Gaps = 70/530 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + L+ +  + G IYK   
Sbjct: 64  GVSAQELANRYNRVIAKDLCD-LGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKDTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           + E E +F  L A  +  L++ ++   +      R  VI+F     K++     T   DW
Sbjct: 182 FEETEHFFLDLPALAEANLAWLKTREGW------RTNVINFSIGLFKEVKPRAITRDIDW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVI 263
           GI +P     D+P   +YVW DA+  YL+ +        +P+  +A +W        + +
Sbjct: 236 GIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRA-WWNDPTTPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I
Sbjct: 355 VIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLI 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP     + T+ D ++L+      + +   ++N     AL++ + +V ++++Y
Sbjct: 415 NKNF-GEIPAFDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +PW++K  NP R  TVL+   + +     LL  F+P  A K+++ L
Sbjct: 474 ISATEPWKIKD-NPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEAL 522


>gi|188994145|ref|YP_001928397.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|226710912|sp|B2RHF5|SYM_PORG3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|188593825|dbj|BAG32800.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 680

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 239/510 (46%), Gaps = 37/510 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G D L   G+DEHG  IA 
Sbjct: 3   RQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIAL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +  VD+     +   + L IS+D + RTT   H  T    +K + +KG+  
Sbjct: 63  KAKAEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFV 122

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWMEEE 163
           +     +Y    + +  D            D  Y     A G   NA    +P   +   
Sbjct: 123 EQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEACGTSLNATDLIDPRSTISGS 182

Query: 164 GYFFRLSAYQDKLLSYYESH-PEFILPIERR------NEVISFVKSGLKDLSLSRKTFDW 216
               R + +    L  +E    E+IL   +        +  S++  GL+  ++SR   DW
Sbjct: 183 APVLRETKHWYLPLDKHEPFLKEWILDGHKEWKSNVYGQCKSWLDMGLQPRAVSRD-LDW 241

Query: 217 GIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           GI +P +     ++YVW DA   Y++ T  L  PD S   +W ++    +H IGKD + F
Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-CPD-SWETWWKSEDTRLVHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +EE     D LRY
Sbjct: 300 HCIVFPAMLRAEGSFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHKYFDGAVPPKGELTDYD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              +   + V Q +   +       AL + ++L    ++Y    +PW+L KT+ +R +T+
Sbjct: 420 SRTIEEFAAVKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKTDMNRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L +++++   LAI  + F+P  + K+  +L
Sbjct: 480 LNLSLQITANLAIAFEPFLPFSSAKLMSML 509


>gi|225011284|ref|ZP_03701741.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004594|gb|EEG42559.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 689

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 246/533 (46%), Gaps = 51/533 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  +  I+ A+ Y N   HIGH A   + AD+ +R+ R  G DV F  G+DEHG  I+  
Sbjct: 6   EASRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRGIGKDVAFVCGSDEHGVAISMK 65

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A+  G+T K  +D+     S++F D      I++D + RT+ + HH T    +KK+    
Sbjct: 66  AKKEGITPKEVIDKYHAMISKSFIDFG----ITFDHYSRTSGEMHHKTASDFFKKLHQDQ 121

Query: 118 DIYKGCYSGWYSLRDEAYYND------------DEVYKG---ADGQYYNAQH--NPVQWM 160
              +      +    E +  D            +E Y     + G   NA    NP   +
Sbjct: 122 AFIEEITPQLFDPEAEQFLADRFVTGTCPKCGNEEAYGDQCESCGSSLNATELINPKSTL 181

Query: 161 --------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                   E + +F  L  Y+  L  +  E H +   P     +  S+++ GLK  +++R
Sbjct: 182 SGAIPILKETKHWFLPLDKYESFLRKWILEGHKKDWKP-NVYGQCKSWIEEGLKPRAVTR 240

Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD----LHV 262
              DWGI +P       ++YVW DA   Y++ T      +N D     +W  +    +H 
Sbjct: 241 D-LDWGIPVPVPGGEGKVLYVWFDAPIGYISATKEWAAKNNKDWEP--YWKDENTKLVHF 297

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH I +PA L +  +  LP+ V ++ F+  +G+K+S S    +   E +E   
Sbjct: 298 IGKDNIVFHCIIFPAMLKAHGDYILPENVPANEFLNLEGQKLSTSKNWAVWLHEYLEAFP 357

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     + R N +L   +GN ++R V +  K Y G +P+
Sbjct: 358 DQQDVLRYTLTANAPESKDNDFTWKDFQARNNNELVAILGNFINRGVVLTQKYYQGKVPS 417

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           PG     D   L+        I  +++      A   ++ +    ++Y    +PW+L KT
Sbjct: 418 PGHLEAIDLETLAALKEFPATIANSLEKYRFREASGILMQVARLGNKYLADNEPWKLIKT 477

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           +P R  T++YV++++   LA+L + F+P  ANK+ ++L +A  N  ++ + ++
Sbjct: 478 DPKRVETIMYVSLQIAAALAVLSEPFLPFTANKLNEMLHLAPLNLSWKDVAEK 530


>gi|313204253|ref|YP_004042910.1| methionyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443569|gb|ADQ79925.1| methionyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 679

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 240/513 (46%), Gaps = 41/513 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  +++A+ Y N   HIGH A   + AD+  R+ RL G +VLF  G+DEHG  I 
Sbjct: 1   MTNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKGEEVLFVGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +   +   IS+D + RTT K H +    ++K I+DK   
Sbjct: 61  IKAKKEGVTPQDIVDRYHGIIKKSFEDFGISFDIYSRTTSKTHKELASEIFKTINDKDGF 120

Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160
                  +Y    + +  D           +E   G   +      NP   +        
Sbjct: 121 VIQTSEQYYDETAQQFLADRYITGKCPHCGNENAYGDQCEACGTSLNPTDLINPKSAISG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 181 SAPVMRETKHWYLPLDQHEAWLRQWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD- 237

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
            DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       LH IGKD 
Sbjct: 238 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLLHFIGKDN 295

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +EE     D 
Sbjct: 296 IVFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDV 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R++ +  K YDG +P  G  T
Sbjct: 356 LRYVLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRALVLTQKYYDGKVPALGQLT 415

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D+  L     V  ++ + + N     A  + ++L    ++Y    +PW++ KT+ DR 
Sbjct: 416 DYDKQTLDEFVNVKADVEKLLNNFRFRDAQKEAMNLARIGNKYLADTEPWKVAKTDMDRV 475

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ST++++++++   LAI  + F+P  + K+  +L
Sbjct: 476 STIMHLSLQIAANLAIAFEPFLPFTSEKLRTML 508


>gi|53802679|ref|YP_112557.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|68565970|sp|Q60CR0|SYM_METCA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53756440|gb|AAU90731.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 694

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 236/518 (45%), Gaps = 54/518 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  RF ++ G D  +    D HG  I  
Sbjct: 1   MTSPRKILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKMRGHDCRYVCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G++ +  + + +  + RD      I +D++  T  +        ++ ++ D+G I
Sbjct: 61  RAEKEGISPEELIARVHGEHLRDFTG-FHIEFDNYYSTHSEETRAHAADIYGRLKDRGLI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWM------- 160
                  ++    E +   D   KG      A  QY ++       ++P   +       
Sbjct: 120 ESRAIEQYFDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTDLINPYSVVS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E   YFF+L    + L  +  S     L  E  N++  + ++GL D  +SR  
Sbjct: 179 GAAPVRRESVHYFFKLGECAEFLKDWTRSG---ALQTEAANKLNEWFEAGLSDWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267
             +G +IPD P    YVW+DA   Y+ +   L +  G   A++W  D      H IGKDI
Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMGSFQNLCDRLGLDFAEYWKKDSEAELYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FHA++WPA L  +    P ++F+HGF+   GEK+SKS G  I     +E+ +  + LR
Sbjct: 296 LYFHALFWPAMLEHSGFRTPTRIFAHGFLTVNGEKMSKSRGTFITAQSYLEQGLNPEWLR 355

Query: 327 YFLVREIACGKDGFYDKDGLK-----KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           Y+     AC  +G  +   L       RVN+DL     N+ SR+   + K +DG +  P 
Sbjct: 356 YYY----ACKLNGTMEDIDLSLEDFVARVNSDLVGKYINIASRTAGFVTKFFDGRLDVPM 411

Query: 382 AFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
              + +  + ++       +EI     ++  ++A+ +++ L  EV+ + + +KPWE+ K 
Sbjct: 412 QLADGEALDFLIDRLRDSAEEISGYYDSRDYNKAIRKIMELADEVNIFVNEKKPWEIAKR 471

Query: 440 NPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +   +      V  +T+ + R L I L+  +P+LA  +
Sbjct: 472 DDSYSRGYLRVVCAITLNLFRLLTIYLKPILPRLAEAV 509


>gi|319776160|ref|YP_004138648.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123331|ref|ZP_08251896.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
 gi|317450751|emb|CBY86971.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471331|gb|EGF16783.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
          Length = 682

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 237/501 (47%), Gaps = 45/501 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L + +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDETLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLA 470
           + +E+ R L   L+  +PKLA
Sbjct: 478 MGIELFRVLMSYLKPVLPKLA 498


>gi|325121110|gb|ADY80633.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 688

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 240/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFSEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A TE  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSADCAETELVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAKQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|196033059|ref|ZP_03100472.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218906235|ref|YP_002454069.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|226695272|sp|B7JEJ3|SYM_BACC0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|195994488|gb|EDX58443.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218535969|gb|ACK88367.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 544

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+
Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|260582922|ref|ZP_05850706.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094022|gb|EEW77926.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 682

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L N +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSD----KLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++ + ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKSPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|157375788|ref|YP_001474388.1| methionyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083266|sp|A8FWN7|SYM_SHESH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157318162|gb|ABV37260.1| Methionine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 692

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 238/507 (46%), Gaps = 47/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 65  QLGIEPEEMIAQVNKEHQQDFAD-FNIKFDNFHSTHSVENRELSGEIYLKLRDAGFIKTR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWME--------- 161
             S  +   +++ +  D   KG      ++ QY +      A +NP   ++         
Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLIDPKSAVSGAT 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L A+++ L  +  S     +  E  N++  + + GL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPAFENMLSEWTRSG---AIQDEIANKLAEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +   D +   FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWSKDSTAEVYHFIGKDIVN 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGYRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +    A T  +E
Sbjct: 360 AAKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKI-ADTTLEE 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L+    V+ ++ EN +     +A+ ++++L    + Y     PW+L K     D A  
Sbjct: 419 TFLAK-QEVIADLYENRE---FGKAMREIMALADIANAYVADAAPWQLIKDEAKQDEAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
           V    + + R L   L+  +PKLA+ +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPKLADDV 501


>gi|310768068|gb|ADP13018.1| methionyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 676

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 225/504 (44%), Gaps = 44/504 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGMAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG             + +  +A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPNCQSPDQYGDNCEVCSATYSPTELIKPKSVVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  +   L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 LRDSEHFFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH
Sbjct: 242 EIPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWRQDSDAELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   
Sbjct: 302 SLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A    D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAELA----DPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
                     I +   ++   RA+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 418 YQTFIDASNSIAQAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            + + + R L   L+  +P LA +
Sbjct: 478 SMGINLFRVLMTWLKPVMPSLAER 501


>gi|213961726|ref|ZP_03389992.1| methionyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955515|gb|EEB66831.1| methionyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 688

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 230/510 (45%), Gaps = 47/510 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+  G 
Sbjct: 7   ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAKKEGT 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  +D+     +       IS+D++ RT+   HH T    +KK+ ++GD  +      
Sbjct: 67  TPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEISEQL 126

Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y      +  D  V     K  + + Y  Q       E  G     +   D   S   S 
Sbjct: 127 YDEEAHQFLADRFVIGTCPKCGNPEAYGDQ------CERCGSSLNATDLIDPKSSITGSK 180

Query: 184 P------EFILPIERRNE-----------------VISFVKSGLKDLSLSR---KTFDWG 217
           P       + LP+ R  E                 V   VKS L D    R   +  DWG
Sbjct: 181 PTLKATKHWFLPLNRYQEFLEKWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRDLDWG 240

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + F
Sbjct: 241 IPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDKNTELVHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G K+S S    +   E +++     D LRY
Sbjct: 301 HCIIFPAMLKAEGSYILPTNVPANEFLNLEGNKLSTSKNWAVWLHEYLQDFPNQQDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN ++R   +  K Y+G+IP  G F + D
Sbjct: 361 ALTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVIPAAGEFNDID 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              L   + + ++I ++++      A  +++++    ++Y   ++PW+L KT+P+R  TV
Sbjct: 421 TETLRQITELTEKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTV 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +YV +++   LA+  + F+P  + K+  +L
Sbjct: 481 MYVALQIATALAVASEPFLPFTSEKLKRML 510


>gi|224025452|ref|ZP_03643818.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM
           18228]
 gi|224018688|gb|EEF76686.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM
           18228]
          Length = 680

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 244/512 (47%), Gaps = 41/512 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     RD      IS+D + RT+ K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160
           +     +Y      +  D  +        A+G Y        +  +P + +         
Sbjct: 123 EKTSEQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 KPVMKETKHWYLPLDKHEGWLRQWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSR-DL 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
           DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IGKD +
Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLIHFIGKDNI 297

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D L
Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+
Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPACGELTD 417

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+  R +
Sbjct: 418 YDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMGRVA 477

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+L + ++++  LAI  + F+P  + K+  +L
Sbjct: 478 TILNIALQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|91217588|ref|ZP_01254546.1| methionyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184268|gb|EAS70653.1| methionyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 686

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 242/513 (47%), Gaps = 37/513 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK  ++  ++ A+ Y N   HIGH A   + AD+  R+ +L G DV F  G+DEHG  I 
Sbjct: 1   MKNPKRYTVTAALPYTNGPIHIGHLAGVYVPADIYVRYLKLKGEDVAFLCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+ +   +       I +D++ RT+ K HHDT    +K + DKG  
Sbjct: 61  IKAKKEGISPQDVVDKYNAIIKQSFQDFGIQFDNYSRTSAKIHHDTATEFFKTMYDKGKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWMEE 162
            +      Y  +   +  D  V     K  + + Y  Q              NP   +  
Sbjct: 121 IEETTEQLYDAKANQFLADRFVTGTCPKCGNEEAYGDQCEKCGSSLNATDLINPKSAITG 180

Query: 163 EGYFFRLSAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRKTF 214
           +    + + +    L  Y+    ++IL   +++       +  S++  GL+  +++R   
Sbjct: 181 DVPTLKSTKHWFLPLDQYDGFLKDWILKDHKKDWKANVYGQCKSWLDEGLRARAVTRD-L 239

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y+++T      +G   + +  D     +H IGKD 
Sbjct: 240 DWGIPVPVKGGEGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDKDTKLVHFIGKDN 299

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP  V ++ F+  +G K+S S    +   + +E+     D 
Sbjct: 300 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGRKLSTSKNWAVWLHDYLEDFPGKEDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N++L    GN ++R V +  K Y+G++P    F+
Sbjct: 360 LRYVLTANAPETKDNDFTWKDFQTRNNSELVAIYGNFINRVVVLTHKYYEGVVPKAFDFS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E+D  +         +I  +++      A   +++L    ++Y   ++PW+L+KTNP+R 
Sbjct: 420 ETDLKVFEDIKTFPSQISASIEKYRFREAQGIMMNLARLGNKYLADEEPWKLQKTNPERT 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ST++YV ++V   LA+L + F+P  A K+  +L
Sbjct: 480 STIMYVALQVSSALAVLSEPFLPFTALKLKTML 512


>gi|330811331|ref|YP_004355793.1| Methionine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379439|gb|AEA70789.1| Methionine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 681

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 230/516 (44%), Gaps = 44/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D A+ L + +D+F  T  + + +    ++ K+ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHAEENRELSSQIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158
                + ++    + +  D  +       G + QY        A + P            
Sbjct: 120 ATRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + + +FF+L  +Q  L ++  S     L     N++  ++ +GL+   +SR   
Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQAWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L N  P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCNRTPELDFDAFWGKDSTAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGFRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAGNAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            ++ L+        I +  +++   RA+ ++++L    + +   + PW L K     D  
Sbjct: 417 TDAFLAAAP----SIADAYESRDFARAMREIMALADRANAWIADKAPWSLAKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +  + + + RQL I L+  +P LA      L VA
Sbjct: 473 QAICALGINLFRQLVIFLKPVLPLLAADAEAFLNVA 508


>gi|313497463|gb|ADR58829.1| Methionyl-tRNA synthetase [Pseudomonas putida BIRD-1]
          Length = 679

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 235/521 (45%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262
             +G +IP +P    YVW+DA   Y+ +   L    P+         GSKA+ +    H 
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 291

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  
Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351

Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+   ++  G D    + +   ++VN+DL   + N+ SR    I K  +G++ +  
Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVSGD 411

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
           A  E  E+ L+        I E  + +   RA+ ++++L    + +   + PW L K   
Sbjct: 412 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D    +    + + RQL I L+  +P LA      L VA
Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508


>gi|146304661|ref|YP_001191977.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|189083262|sp|A4YI01|SYM_METS5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145702911|gb|ABP96053.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 568

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 253/547 (46%), Gaps = 50/547 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y  + PH+G+    I+ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KILVASAWPYVQSVPHLGNLIGSILSADVFARYARLKYGKENVVFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              GV+ K   DQ     R +  +  +IS+D++ RT  + H    +     +S    + +
Sbjct: 62  IKRGVSPKSLTDQAHEYDRQLFLNTWNISFDNYTRTESEVHKSFVKEFLLGVSKYIKVEE 121

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN-----------------AQHNP 156
                 Y  RD+ +  D  V        ++ A G   +                     P
Sbjct: 122 EELP--YCERDKLFLPDRFVKGTCPYCGFEDARGDQCDRCGRLLTPSLLINPKCAICGTP 179

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + + +FF L  + + +  +  S  +  +P   +   +S+V  GLK  SL+R    W
Sbjct: 180 PVLRKTKHWFFDLRPFSEPIREWITSSQD--MPENVKGTALSWVNEGLKPRSLTRDN-SW 236

Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWP----ADLHVIGKDI 267
           GI    P      +YVW +AL  YL+ T       G   +   FW        + IGKD 
Sbjct: 237 GIPAPFPGAEGKTIYVWFEALLGYLSATLEYFQGRGETERWKEFWENGKVRSYYFIGKDN 296

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323
           + FHA+  PA LL++  N  LP  + +  +++++G+K SKS  +G  ID   +I EV  D
Sbjct: 297 IPFHAVILPAMLLASEKNYALPTVIAATEYLMYEGQKFSKSRKIGIWIDEAPLIMEV--D 354

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R+ L+R     KD  +      + VN++L + +GNLV+R ++M+ + + G IP P   
Sbjct: 355 YWRFLLIRMRPEEKDMNFTWTEAIRIVNSELNDDVGNLVNRVITMVNRYFQGKIPEPKNL 414

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D  +LS     L ++    +   +      V++L  E + Y + + PW+  K++ + 
Sbjct: 415 KEVDMRLLSRVGETLDQVSFMFEKGKLKGGTELVLTLARETNAYLNEKAPWDKVKSDVED 474

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           AS  L+V    IR +A++L   +P+ A  I+D L +      + +  + LKPG ++ K  
Sbjct: 475 ASNTLFVASSAIRAIALMLYPVIPEKAKLIYDQLGLDITQERWDNAKEPLKPGHVVGKP- 533

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 534 APVFKKL 540


>gi|77460728|ref|YP_350235.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123603456|sp|Q3K7L0|SYM_PSEPF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77384731|gb|ABA76244.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 683

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 228/516 (44%), Gaps = 44/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D A+ L + +D+F  T  + + +    ++ K+ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHAEENRELSSQIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158
            +   + ++    + +  D  +       G + QY        A + P            
Sbjct: 120 AQRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + + +FF+L  +Q+ L ++  S     L     N++  ++ +GL+   +SR   
Sbjct: 180 ATPVLKDSQHFFFKLPDFQEMLQAWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
            +G +IP +P    YVW+DA   Y+ +   L N  P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCNRTPELDFDAFWGKDSTAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGFRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIQKGNAGLLVDTNAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            E+ L+        I +  + +   RA+ + ++L    + +   + PW L K     D  
Sbjct: 417 TEAFLAAAP----SIADAYEARDFARAMRETMALADRANAWIADKAPWSLNKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             V    + + RQL I L+  +P LA      L VA
Sbjct: 473 QAVCATAINLFRQLVIFLKPVLPVLAADAEAFLNVA 508


>gi|260551003|ref|ZP_05825208.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405951|gb|EEW99438.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 688

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 239/546 (43%), Gaps = 69/546 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY---- 120
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 121 -------KGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME-- 161
                  KG +             + E  Y D  EV     G  YNA    NP   +   
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGA 177

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    
Sbjct: 178 TPVEKSSDHYFFKLPNFSEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPY 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
           +G +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI
Sbjct: 236 FGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY
Sbjct: 296 VYFHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRY 355

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A +E 
Sbjct: 356 YFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAECAESEL 415

Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            +S +     + +  E RE         A+ ++++L    ++Y D +KPW L K      
Sbjct: 416 VQSFIDAGDSIAKAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQ 469

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSL 489
               V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L
Sbjct: 470 QVLDVCSVGINLFRQLAVYLAPVLPTLAKQVQDFLKLESFDFESRKQILVSHEIAQFQPL 529

Query: 490 DQRLKP 495
            QR+ P
Sbjct: 530 MQRVDP 535


>gi|325275202|ref|ZP_08141169.1| methionyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324099689|gb|EGB97568.1| methionyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 679

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 233/517 (45%), Gaps = 46/517 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYTRLREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 TTRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFW----PADL-HVIGKD 266
             +G +IP +P    YVW+DA   Y+ +   L    P+     FW     A+L H IGKD
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWREGSTAELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LR
Sbjct: 296 IVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLR 355

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++ +  A  E
Sbjct: 356 YYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNQGVMVSGDAAPE 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
             E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D 
Sbjct: 416 LTEAFLAAAP----SIAEAYEGRDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDE 471

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +    + + RQL I L+  +P LA      L VA
Sbjct: 472 VQAICAQGINLFRQLVIFLKPVLPLLAADAEAFLNVA 508


>gi|228930066|ref|ZP_04093076.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228829565|gb|EEM75192.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 544

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|218463182|ref|ZP_03503273.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 203

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 86/178 (48%), Positives = 121/178 (67%), Gaps = 3/178 (1%)

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+DG Y ++ +  R+N+DLANGIGNL SRS+SMI+K+ DG IP  G  T+ D+++L+   
Sbjct: 23  GQDGSYSEEAIGIRINSDLANGIGNLASRSLSMIVKNCDGKIPECGPLTDEDKAMLAQVD 82

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +    RE+M  Q IHRALA +I++VS+ DRYF  Q PW LKKT+P+R  TVLYVT EV+
Sbjct: 83  ALHASTREDMGKQQIHRALASIIAVVSDTDRYFAGQAPWALKKTDPERMGTVLYVTAEVV 142

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           RQ+AILLQ F+P  + K+ D++    + R F +L +  RL  G  L     P+FPR++
Sbjct: 143 RQIAILLQPFMPDSSGKLLDLVAAPADKRDFAALGEAGRLIAGTPLEAPT-PVFPRYV 199


>gi|154509672|ref|ZP_02045314.1| hypothetical protein ACTODO_02205 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799306|gb|EDN81726.1| hypothetical protein ACTODO_02205 [Actinomyces odontolyticus ATCC
           17982]
          Length = 576

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 228/497 (45%), Gaps = 60/497 (12%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DVL  +GTDEHG  I  AA  AGV+ +   DQN+R   +    L +SYD F RTT 
Sbjct: 1   MAGHDVLMVSGTDEHGTPILVAADGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTA 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVYKGADG----QY 149
             H+   + ++  + D G + +         S   +L D  Y        GA+G    Q 
Sbjct: 61  GNHYRVVQDMFATVRDNGYMIEKVTRAAISPSTGRTLPDR-YIEGTCPICGAEGARGDQC 119

Query: 150 YNA--QHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
            N   Q +P +              ++E   YF  L A  + L ++ +   +       R
Sbjct: 120 DNCGNQMDPTELINPHSRINGETPNFVESTHYFLDLPALAEALSAWLDEREKSGT---WR 176

Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP---DDPQYIMYVWIDALTNYLTTT----GY 244
             VI F ++ L+D+     T   DWGI +P   D P   +YVW DA+  YL+ +      
Sbjct: 177 PNVIKFSQNFLEDIRPRAMTRDIDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARR 236

Query: 245 LDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------LPL 286
             +P+  + K+W  P  L  + +GKD + FH+  WPA LL  N              L L
Sbjct: 237 TGDPEAWR-KWWNDPEALTYYFMGKDNIVFHSQIWPAELLGYNGQGAKGGAPGDLGVLNL 295

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P +V S  F+  +G+K S S G VI   + +     DALRYF+        D  +     
Sbjct: 296 PTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEF 355

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +R N +L  G GNLV+R+ SMI K + G IPTPG   + D ++L       + +   ++
Sbjct: 356 VRRTNGELVAGWGNLVNRTASMIAKKF-GEIPTPGELEDIDRTLLDAVETGFETVGNLIR 414

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAF 465
           +     AL++ + LV E ++Y    +P++LK      R +TVL+   + +  L ++L  F
Sbjct: 415 HHRQKAALSEAMRLVGEANKYVTDTEPFKLKAPEQQQRLATVLWTLAQAVTDLNLMLSPF 474

Query: 466 VPKLANKIFDILFVADE 482
           +P  AN I  ++  A E
Sbjct: 475 LPHAANDIDRVMGGAGE 491


>gi|212635626|ref|YP_002312151.1| methionyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212557110|gb|ACJ29564.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit [Shewanella piezotolerans WP3]
          Length = 697

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 234/508 (46%), Gaps = 49/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 24  QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 83

Query: 64  NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q  +   +D AD  +I +D+F  T  + + +    ++ K+ D G I   
Sbjct: 84  QMGIAPEEMIAQVQKEHEKDFAD-FNIQFDNFHSTHSEENRELASEIYVKLRDSGYIKTK 142

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHNPV 157
             S  +   +++ +  D   KG      ++ QY                   Y+A     
Sbjct: 143 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLLNPYSAVSGAT 201

Query: 158 QWMEE-EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
             M++ E +FF L A++  L  +  S     L  E  N++  + + GL+   +SR    +
Sbjct: 202 PVMKDTEHFFFDLPAFEGMLKEWINSGS---LQQEMANKLSEWFEQGLQQWDISRDAPYF 258

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +   D +   FW  D      H IGKDI+ 
Sbjct: 259 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSKDSTAEVYHFIGKDIVY 318

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 319 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 378

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +       +  +
Sbjct: 379 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKL------AKIAD 432

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
           S L+ C    QE   N+ + +   +A+ ++++L    + Y     PW+L K     + A 
Sbjct: 433 SSLTDCFVAKQETIANLYETREYGKAMREIMALADVANAYVADAAPWQLIKDEAKQEEAH 492

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V    + + R L   L+  +PKLA  +
Sbjct: 493 QVCSNALNLFRILVTYLKPVLPKLAADV 520


>gi|258626535|ref|ZP_05721374.1| methionyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581182|gb|EEW06092.1| methionyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 729

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 53  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 112

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 113 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 171

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  Y    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 172 SQLYDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 230

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 231 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 287

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 288 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYFH 347

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 348 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 407

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 408 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 467

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 468 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 521

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 522 ICTVGINLFRVLVTYLKPVMPALAER 547


>gi|229124576|ref|ZP_04253761.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228658916|gb|EEL14571.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
          Length = 544

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 247/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTAYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+
Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|319953400|ref|YP_004164667.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422060|gb|ADV49169.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 689

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 243/519 (46%), Gaps = 39/519 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   +  I+ A+ Y N   HIGH A   + AD+ +R+ RL G DV F +G+DEHG  I+ 
Sbjct: 6   KNPSRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLIGKDVAFISGSDEHGVAISM 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K  +D+     +       I++D++ RT+ + HH+T    +K + D+GD  
Sbjct: 66  KAKKEGITPKEVIDKYHAIIKKSFADFGITFDNYSRTSAEIHHETASEFFKTMYDQGDFI 125

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGAD---GQYYNAQH--NPVQWM--- 160
           +      Y    + +  D            +E Y       G   NA    NP   +   
Sbjct: 126 EETTEQLYDPEAKQFLADRFVVGTCPKCGYEEAYGDQCENCGSTLNATDLINPKSTISGA 185

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + +F  L  ++  L  +  E H     P     +  S++  GLK  +++R   
Sbjct: 186 APTVKETKHWFLPLDRHEAFLKEWILEGHKNDWKP-NVYGQCKSWIDDGLKPRAVTRD-L 243

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y+++T      +G     +W  +    +H IGKD 
Sbjct: 244 DWGIPVPVPGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLVHFIGKDN 303

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+ L +     LP  V ++ F+  +G K+S S    +   E +E+     D 
Sbjct: 304 IVFHCIIFPSILKAHGGYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNMQDV 363

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R V +  K Y G+IPTP AF+
Sbjct: 364 LRYTLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLSNKYYQGIIPTPAAFS 423

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L+   +  + I  +++      A  +++SL    ++Y   ++PW++ K + +R 
Sbjct: 424 DIDLETLAEVKKYPEIISSSIERYRFREAGQELMSLARLGNKYLADEEPWKVIKQDEERV 483

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            T+++V +++   LA+L + F+P  + K+ +IL    +N
Sbjct: 484 KTIMFVALQIAEALAVLSEPFLPFTSTKLKNILHSDAQN 522


>gi|262195070|ref|YP_003266279.1| methionyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262078417|gb|ACY14386.1| methionyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 557

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 228/517 (44%), Gaps = 42/517 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I+  + Y N   H+G+    M+ ADV ARF R +G +VL+   TDEHG     AA  
Sbjct: 2   KTLITAGLPYINGIKHLGNLVGSMLPADVYARFLRQEGDEVLYVCATDEHGVPAELAAHE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + F +   +   D+     I++D F R++   +H+  R ++ +++D G I K   
Sbjct: 62  AGQPVEAFCEAQHQIQADIYRRFGIAFDYFGRSSAPSNHELTREIFSQLADNGFIEKRAT 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWME------------ 161
              YSL D+ Y  D            E  +G   +      +P   +E            
Sbjct: 122 QQVYSLDDQRYLPDRYVIGTCPRCGYEAARGDQCESCTTLLDPTDLIEPRSAVSGSTKLE 181

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E  +  LS  +  +  + E   ++  P   R     ++  GL+D  ++R    WG+
Sbjct: 182 VRSTEHLYLLLSKLEPTVKDWVEEQGQW--PPLTRQVAGKWLGEGLRDRCITRN-LAWGV 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW--PADLHVI---GKDILR 269
            +P + + + YVW DA   Y+  T         PD  KA +W    D+H +   GKD L 
Sbjct: 239 DVPGEEELVFYVWFDAPIGYIAATRDWAESSGQPDAWKA-YWQDATDVHYVQFMGKDNLP 297

Query: 270 FHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH I +PA L+  S++  LP ++    ++ + G K S S    +     +E    D  RY
Sbjct: 298 FHTIMFPAMLMGASSSWNLPDQIKGLHWLNYYGGKFSTSQKRGVFSDAALELFPADYWRY 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+ +I    D  +  +     VN DLA+ +GN V+R +      +   +P  G+   ++
Sbjct: 358 ALMAQIPETSDSTFTWEMFASAVNKDLASVLGNFVNRVLRFTRSKFGETLPEGGSPGPAE 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            ++   C   ++  R +M+     RA+  +  L +  + Y D + PW   KT+ DRA+ V
Sbjct: 418 AALQEECEAQVKLFRASMRALEFRRAMQALRKLWTIGNTYIDTEAPWAAIKTDRDRAAVV 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +     ++R   +  Q  +P L+  + D L ++D  R
Sbjct: 478 IRTCFNLLRLYGVSAQPIMPTLSASVLDALQLSDAER 514


>gi|121997514|ref|YP_001002301.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|187647725|sp|A1WUY7|SYM_HALHL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121588919|gb|ABM61499.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 679

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 229/508 (45%), Gaps = 55/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+ ARF RL G +  +    D HG  I   A+  
Sbjct: 4   RILVTSALPYANGPIHLGHLVEYIQTDIWARFQRLRGNECYYVCADDAHGTPIMLKARER 63

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV  +  +++ + + + D AD L I +D +  T    +     ++++++   G I +   
Sbjct: 64  GVDPEQLIEEMAASHQADFADFL-IGFDRYHSTHSAENRHFAELIYQRLEAGGHIERHTI 122

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
              Y    E  +  D   KG      A  QY        A + P +              
Sbjct: 123 EQLYD-PGEGMFLPDRYIKGTCPRCAAPDQYGDSCEACGATYTPAELQDPVSVISGERPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             E E +FFRL  ++  L  +  +    PE I      N++  + ++GL+D  +SR    
Sbjct: 182 VRESEHFFFRLQDFEALLRQWASAEHLQPEII------NKLNEWFEAGLRDWDISRDAPY 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-------LHVIGKDI 267
           +G +IP       YVW+DA   Y+ +   L    G     FW A         H IGKDI
Sbjct: 236 FGFRIPGTEDKYFYVWLDAPIGYMASFRRLAEERGIDFDAFWDAGRAEETELYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             FH ++WPA L  A    P  V+ HGF+   G+K+SKS G  I     ++ +  + LRY
Sbjct: 296 AYFHTLFWPAMLHGAGYRTPTAVYCHGFLTVNGQKMSKSRGTFITARSYLDHLDPEYLRY 355

Query: 328 FLVREIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D     D   +RVN+D+   + N+ SR    I K +DG +    A   S
Sbjct: 356 YTAAKLSDSVEDIDLSFDDFVQRVNSDVVGKLVNIASRCAGFITKRFDGRL----APRLS 411

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
              +    +   + I E  + +   RA+ +++ L  + ++Y DA+KPWE  K +P++A  
Sbjct: 412 APELFRTFTASAERIAELYEQREYARAVREIMHLADQANQYIDAEKPWERIK-DPEQARA 470

Query: 447 VLYVT---VEVIRQLAILLQAFVPKLAN 471
           V  +    + + R L I ++  +P+LA 
Sbjct: 471 VQEICTMGLNLFRVLIIYIKPIMPRLAE 498


>gi|254236431|ref|ZP_04929754.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126168362|gb|EAZ53873.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 677

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 230/520 (44%), Gaps = 52/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T++  +D   + +  D AD L + +D++  T  + + +    ++ K+ D G I
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFL-VDFDNYHSTHSEENRELSSAIYLKLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG---- 164
                + ++    + +  D  +             G + +   A + P +  + +     
Sbjct: 120 DTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKESLHYFFKLPDFEAMLKQWTRSG---ALQESVANKLAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L    P+     FW  D      H I KDI
Sbjct: 237 YFGFEIPDAPGKYFYVWLDAPIGYMPSFKNLCTRRPELDFDAFWGKDSSAELYHFIAKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRY 356

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGA 382
           +   ++  G +D   + +   ++VN+DL   + N+ SR    I K   G++    P P  
Sbjct: 357 YYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAP-- 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
                  +L+        I E  + +  +RA+ ++++L    + +   Q PW L K    
Sbjct: 415 ------ELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQ 468

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D+   V  + + + RQL I L+  +PKLA      L VA
Sbjct: 469 QDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA 508


>gi|229846827|ref|ZP_04466934.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810316|gb|EEP46035.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 682

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHMRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L +  D    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREDIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSD----KLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|296505474|ref|YP_003667174.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296326526|gb|ADH09454.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 544

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  LTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 EGLYKRVGEAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|294790187|ref|ZP_06755345.1| methionine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458084|gb|EFG26437.1| methionine--tRNA ligase [Scardovia inopinata F0304]
          Length = 632

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 236/529 (44%), Gaps = 68/529 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVQADAE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R        L +SYD F RTT K H    + ++K+    G IY+G   
Sbjct: 64  GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHEKVVQDMFKQCLKNGYIYQGTQM 123

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPV-----------------QWM 160
              S  +     D  +        Y GA G   +   N +                 ++ 
Sbjct: 124 VAISPSNGRTLPDRYIEGTCPLCGYDGARGDQCDNCGNELDSIDLINPRSKINGEIPRFE 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWG 217
           E + YF  L A  +  L++ ++   +      R  VI+F   GL D    R   +  +WG
Sbjct: 184 ETDHYFLDLPALAEANLAWLKTRKNW------RTNVINF-SLGLFDEVKPRAITRDINWG 236

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW-----PADLHVIG 264
           I IP     D+P   +YVW DA+  YL+ +       G      ++W     PA  + +G
Sbjct: 237 IPIPVDGWVDNPDKKLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPESPA-YYFMG 295

Query: 265 KDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WP+ +L+ N              L LP +V +  F+  +G+K S S G V
Sbjct: 296 KDNITFHSQIWPSEILAYNGEGSKGGEPGGLGRLNLPTEVVASEFLSMEGKKFSSSRGIV 355

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +++    VDA+RY++        D  +      +  N +L +  GNLV+R   ++ 
Sbjct: 356 IYVKDILSRYQVDAVRYYISIAGPETSDSDFTWSEFVRHNNEELVSSWGNLVNRVAVLLY 415

Query: 371 KDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           K++ G IP     A  + D  +L         +   +++     AL + + +V E++RY 
Sbjct: 416 KNF-GQIPQIELTALEDMDRDLLKTTEEGFHTVGSLIESHRQKAALTEAMHIVQEINRYV 474

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            A +PW+LK  NP+R + VL+   + +     LL  F+P  A K+++ L
Sbjct: 475 SATEPWKLKD-NPERLAAVLHTAAQAVMDANTLLAPFLPHSAQKVYETL 522


>gi|30265080|ref|NP_847457.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530586|ref|YP_021935.1| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187891|ref|YP_031144.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317025|ref|ZP_00389984.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165870881|ref|ZP_02215533.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634931|ref|ZP_02393249.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639976|ref|ZP_02398244.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685894|ref|ZP_02877117.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707026|ref|ZP_02897483.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652275|ref|ZP_02934778.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567277|ref|ZP_03020192.1| putative methionyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817810|ref|YP_002817819.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229602311|ref|YP_002869277.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
 gi|254687371|ref|ZP_05151228.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725384|ref|ZP_05187167.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733720|ref|ZP_05191436.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740558|ref|ZP_05198249.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254753180|ref|ZP_05205216.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761523|ref|ZP_05213544.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|68566041|sp|Q81XF9|SYM2_BACAN RecName: Full=Methionyl-tRNA synthetase 2; AltName:
           Full=Methionine--tRNA ligase 2; Short=MetRS 2
 gi|254782848|sp|C3P025|SYM_BACAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782849|sp|C3LD96|SYM_BACAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30259757|gb|AAP28943.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47505734|gb|AAT34410.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181818|gb|AAT57194.1| methionyl-tRNA synthetase, putative [Bacillus anthracis str.
           Sterne]
 gi|164713390|gb|EDR18915.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512057|gb|EDR87435.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529681|gb|EDR92430.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128129|gb|EDS96999.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670358|gb|EDT21098.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082281|gb|EDT67347.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561781|gb|EDV15751.1| putative methionyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006250|gb|ACP15993.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229266719|gb|ACQ48356.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
          Length = 544

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDCYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+
Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|228936320|ref|ZP_04099118.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823152|gb|EEM68986.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 544

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|330829598|ref|YP_004392550.1| methionyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328804734|gb|AEB49933.1| Methionyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 692

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 226/503 (44%), Gaps = 43/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 22  KMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFICADDAHGTPIMLKAQQM 81

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S+  +      +IS+D++  T    + +   +++ ++ + G I     S
Sbjct: 82  GITPEEMIAAVSKEHQADFAGFNISFDNYHSTHSDENRELAELIYGRLKNGGFIKSRTIS 141

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161
             +   +++ +  D   KG      +  QY        A ++P + ++            
Sbjct: 142 QLFD-PEKSMFLPDRFVKGTCPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGATPVM 200

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +        +  E  N++  + +SGL+   ++R    +G +
Sbjct: 201 KDSEHFFFDLPQFEKWLSEWVRGSG--AIQEEMANKMQEWFESGLQQWDITRDAPYFGFE 258

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272
           IP  P    YVW+DA   Y+ +   L N  G      +W AD      H IGKDI  FH 
Sbjct: 259 IPGAPGKYFYVWLDAPIGYMASFKNLCNKRGDIDFDSYWKADSDAELYHFIGKDIAYFHC 318

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WP+ L  AN   P KV  HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 319 LFWPSMLEGANFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAK 378

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N + NL SR+   I K + G +    A T ++  + 
Sbjct: 379 LNSRIDDLDLNLEDFVQRVNADVVNKLVNLASRNAGFIAKRFGGKL----AATCAEPELY 434

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +     I E  +++   RA+ ++++L  + +RY D + PW + K     A    V  
Sbjct: 435 AEFANARTAIAEAYESREFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVCS 494

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R L   L+  +P LA +
Sbjct: 495 VGINLFRVLMAYLKPVMPLLAER 517


>gi|262166073|ref|ZP_06033810.1| methionyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025789|gb|EEY44457.1| methionyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 683

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 224/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448
                R    I E  + +   RA+ ++ +L  + ++Y D + PW + K+ + D+A   + 
Sbjct: 422 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQESQDQALQDIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 478 TVGINLFRVLVTYLKPVMPALAER 501


>gi|148546380|ref|YP_001266482.1| methionyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148510438|gb|ABQ77298.1| methionyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 710

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 234/521 (44%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 32  MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 91

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ + G I
Sbjct: 92  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLREAGHI 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 151 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 209

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 210 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 266

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262
             +G +IP +P    YVW+DA   Y+ +   L    P+         GSKA+ +    H 
Sbjct: 267 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 322

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  
Sbjct: 323 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 382

Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+   ++  G D    + +   ++VN+DL   + N+ SR    I K  +G++    
Sbjct: 383 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGD 442

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
           A  E  E+ L+        I E  + +   RA+ ++++L    + +   + PW L K   
Sbjct: 443 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 498

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D    +    + + RQL I L+  +P LA      L VA
Sbjct: 499 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 539


>gi|49478861|ref|YP_039056.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|68565980|sp|Q6HBM0|SYM1_BACHK RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|49330417|gb|AAT61063.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 544

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+
Sbjct: 298 SVIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLI 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|315225784|ref|ZP_07867572.1| methionyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|315119916|gb|EFT83048.1| methionyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 626

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 238/530 (44%), Gaps = 70/530 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  I   A   
Sbjct: 7   VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNEVLMVSGTDEHGTPILVQADAE 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124
           GV+ +   D+ +R        L +SYD F RTT K H +  + ++K+    G IYKG   
Sbjct: 67  GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHENVVQEMFKQCLKNGYIYKGTQM 126

Query: 125 -----SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN---------------------PVQ 158
                S   +L D  Y        GADG   +   N                     PV 
Sbjct: 127 VAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDNCGNELDPIDLINPRSKINGETPV- 184

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216
           + E E YF  L A  +   ++ ++   +      R  VI+F      ++     T D  W
Sbjct: 185 FQETEHYFLDLPALAEANYAWLKTRQGW------RTNVINFSLGLFNEVEPRAITRDINW 238

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW-----PADLHVI 263
           GI IP     D+P   +YVW DA+  YL+ +       G      ++W     PA  + +
Sbjct: 239 GIPIPVDGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPQSPA-YYFM 297

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L  N              L +P +V +  F+  +G+K S S G 
Sbjct: 298 GKDNITFHSQIWPSEILGYNGQGSKGGEPGEFGELNMPTQVVASEFLSMEGKKFSSSRGI 357

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +L +  GNLV+R   ++
Sbjct: 358 VIYVKDILARYQVDAVRYYISIAGPETSDSDFTWAEFVRHNNDELVSSWGNLVNRVAVLL 417

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP   P  F E D+++L +       +   +++     AL + + +V E+++Y
Sbjct: 418 HKNF-GQIPAVDPSDFQEEDKALLKMTEEGFASVGGLIEDHRQKAALTEAMRIVQEINKY 476

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +PW++K  +P R + +LY + + +     +L  F+P  A K+++ L
Sbjct: 477 ISATEPWKVKD-DPARLAAILYTSAQAVMDANTMLAPFLPHSAQKVYETL 525


>gi|262368863|ref|ZP_06062192.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316541|gb|EEY97579.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 685

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 237/545 (43%), Gaps = 69/545 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  G
Sbjct: 4   ILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANG 63

Query: 67  VTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY----- 120
           ++ +    +    + RD  D   + +D +  T    +      ++ K  + G+I      
Sbjct: 64  ISPEDQIANVQKEHIRDF-DGFGVHFDHYDSTHSDENRSRASEIYVKNREAGNIAIRPVN 122

Query: 121 ------KGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME--- 161
                 KG +             + E  Y D  EV     G  YNA    NP   +    
Sbjct: 123 QLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDACEVC----GTTYNATELLNPKSTLSGAT 178

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 + YFF+L  + + L  +        LP+   N++  + ++GL D  +SR    +
Sbjct: 179 PVEKSSDHYFFKLPNFSEYLQKWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYF 236

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDIL 268
           G +IPD P    YVW+DA   Y+++   Y+    PD S   FW  D      H IGKDI+
Sbjct: 237 GFEIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLSFDDFWKKDSDKEVYHFIGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     +E +  + LRY+
Sbjct: 297 YFHALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYY 356

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   +D   + D   ++VN+DL   + N+ SR    I   +D  +    A  E  
Sbjct: 357 FASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINTKFDNKLSATCAEPELV 416

Query: 388 ESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--R 443
           +S +     + +  E RE         A+ ++++L  + ++Y D +KPW L K   +  +
Sbjct: 417 QSFIDAGDSIAKAYEARE------FSAAIREIMALADKANQYIDEKKPWALAKVEGEEQQ 470

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI--------FDI-----LFVADENRCFQSLD 490
              V  V + + RQLA+ L   +P LA ++        FD        V  E   FQ L 
Sbjct: 471 VHNVCSVGINLFRQLAVYLAPVLPTLAAQVQAFLKLDRFDFASAQTALVDHEIALFQPLM 530

Query: 491 QRLKP 495
           QR+ P
Sbjct: 531 QRVDP 535


>gi|262280117|ref|ZP_06057902.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262260468|gb|EEY79201.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 688

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 240/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + +SGL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPVSIANKLDEWFESGLTDWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD S   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLDGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  +    A +E  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINSNFNNTLSAECAESELVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIASAYEARE------FSMAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++   L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAEQVQSFLKLESFNFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|167035308|ref|YP_001670539.1| methionyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|187647754|sp|B0KUD8|SYM_PSEPG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|166861796|gb|ABZ00204.1| methionyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 679

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 235/521 (45%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYTRLREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262
             +G +IP +P    YVW+DA   Y+ +   L    P+         GSKA+ +    H 
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 291

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  
Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351

Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+   ++  G D    + +   ++VN+DL   + N+ SR    I K  +G++ +  
Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVSGD 411

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
           A  E  E+ L+        I E  + +   RA+ ++++L    + +   + PW L K   
Sbjct: 412 AAPELTEAFLTAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D    +    + + RQL I L+  +P LA      L VA
Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508


>gi|294786251|ref|ZP_06751505.1| methionine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294485084|gb|EFG32718.1| methionine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 623

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 238/530 (44%), Gaps = 70/530 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  I   A   
Sbjct: 4   VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNEVLMVSGTDEHGTPILVQADAE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY- 124
           GV+ +   D+ +R        L +SYD F RTT K H +  + ++K+    G IYKG   
Sbjct: 64  GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHENVVQEMFKQCLKNGYIYKGTQM 123

Query: 125 -----SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN---------------------PVQ 158
                S   +L D  Y        GADG   +   N                     PV 
Sbjct: 124 VAISPSTGRTLPDR-YIEGTCPICGADGARGDQCDNCGNELDPIDLINPRSKINGETPV- 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216
           + E E YF  L A  +   ++ ++   +      R  VI+F      ++     T D  W
Sbjct: 182 FQETEHYFLDLPALAEANYAWLKTRQGW------RTNVINFSLGLFNEVEPRAITRDINW 235

Query: 217 GIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW-----PADLHVI 263
           GI IP     D+P   +YVW DA+  YL+ +       G      ++W     PA  + +
Sbjct: 236 GIPIPVDGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPQSPA-YYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L  N              L +P +V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEILGYNGQGSKGGEPGEFGELNMPTQVVASEFLSMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +L +  GNLV+R   ++
Sbjct: 355 VIYVKDILARYQVDAVRYYISIAGPETSDSDFTWAEFVRHNNDELVSSWGNLVNRVAVLL 414

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G IP   P  F E D+++L +       +   +++     AL + + +V E+++Y
Sbjct: 415 HKNF-GQIPAVDPSDFQEEDKALLKMTEEGFASVGGLIEDHRQKAALTEAMRIVQEINKY 473

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +PW++K  +P R + +LY + + +     +L  F+P  A K+++ L
Sbjct: 474 ISATEPWKVKD-DPARLAAILYTSAQAVMDANTMLAPFLPHSAQKVYETL 522


>gi|317474804|ref|ZP_07934078.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
 gi|316909485|gb|EFV31165.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
          Length = 680

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 246/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  + H E+     R N   +  S++  GL+  ++S
Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILDDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IG
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +    
Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGK 353

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G
Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGTVPAAG 413

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 414 ELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            R +T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 474 SRVATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|62185234|ref|YP_220019.1| methionyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|68565960|sp|Q5L5M3|SYM_CHLAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|62148301|emb|CAH64068.1| methionyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 551

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 232/510 (45%), Gaps = 44/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +V+   +  +D  D L IS D F RTT   H    +  + ++  KG I     
Sbjct: 64  AGMGYQEYVNMYHKIHKDTFDKLGISIDFFSRTTNPFHKKLVQDFYTELQSKGLIENQIS 123

Query: 125 SGWYSLRDEAYYND-----------------DEVYK-GADGQYYNAQH-------NPVQW 159
              YS  +  +  D                 DE  K GAD +  +  H       + +  
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVHPRSKLSGSQLVL 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  F  L    + LL+Y ++     LP   R  V  ++K+ L+  +++R    WGI 
Sbjct: 184 KETEHAFLHLERMVEPLLAYIDT---CYLPEHIRKFVTDYIKN-LRPRAITRD-LSWGIP 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           +PD P  + YVW DA   Y++ T      L+ P+  K  FW  D    +  IGKD + FH
Sbjct: 239 VPDFPNKVFYVWFDAPIGYISGTMDWAASLNTPEAWK-DFWLEDSTEYVQFIGKDNIPFH 297

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A  +PA  L  ++P  K   + S  F L +G + SKS GN ID    ++   +D LRY L
Sbjct: 298 AAIFPAMELGQSIPYKKMDALVSSEFYLLEGCQFSKSEGNYIDIDTFLDTYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN + R +    K+ +  +  +     + D+
Sbjct: 358 AATAPETSDSEFTFMDFKTRCNSELVGKFGNFIHRVLVFAEKNGFKELAYSANLLEDQDK 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
             L    +++++ +E+     + +A   ++ L +  + YF+ Q PW+L K     R   V
Sbjct: 418 QFLDRAQQIVRDAQEHYSQYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGLSHRVEAV 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P  A +I+ +L
Sbjct: 478 LFCACYCQKLLALISYPIIPGTAWEIWRML 507


>gi|258621822|ref|ZP_05716853.1| methionyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586053|gb|EEW10771.1| methionyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 729

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 53  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 112

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 113 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 171

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 172 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 230

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 231 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 287

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 288 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 347

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 348 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 407

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 408 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 467

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448
                R    I E  + +   RA+ ++ +L  + ++Y D + PW + K+   D+A   + 
Sbjct: 468 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 523

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 524 TVGINLFRVLVTYLKPVMPALAER 547


>gi|116327392|ref|YP_797112.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331994|ref|YP_801712.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280273|sp|Q04Q66|SYM_LEPBJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122284807|sp|Q054R6|SYM_LEPBL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116120136|gb|ABJ78179.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125683|gb|ABJ76954.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 704

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 246/564 (43%), Gaps = 68/564 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF +  G +  F    D HG  +  AA+
Sbjct: 7   QRKILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAAR 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +  +++  +          I+YD++  T  K + +  + ++ K+ +KG I K  
Sbjct: 67  KEKITPEQLIERVGQEHYTDLTSFGINYDNYDSTHSKANQEISKDIYLKLKEKGHISKRS 126

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEE---------- 162
               Y  +D  +  D  +             G + +   A +NP   ++           
Sbjct: 127 IEQAYCEKDRMFLPDRFIKGTCPNCNSKNQYGDNCEVCGATYNPKDLIDSHCTLCGTPPV 186

Query: 163 ----EGYFFRLSAYQDK---------LLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
               +  FF+L  +  K         L S+ E+          + ++  +  +GL+D  +
Sbjct: 187 VKNSDHIFFKLGNFHKKTEQSNVDFDLQSWIETSEAVSESEGVKKKLKEWFDAGLQDWDI 246

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------GYLDNPDGSKAKFWPAD---- 259
           SR    +G +IP +     YVW+DA   Y+ ++       + + P+   + FW       
Sbjct: 247 SRDGPYFGFEIPSEKNKYFYVWLDAPVGYMASSKNFFEKNFPNEPNKFDS-FWKDKNSEI 305

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H IGKDIL FH ++WPA L  +    P K+  HGFI   GEK+SKS G  I      + 
Sbjct: 306 VHFIGKDILYFHTLFWPAMLEGSGYRSPSKIHVHGFIGVNGEKMSKSRGTFIKAKTFAKF 365

Query: 320 VGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +  + LR++L  ++  G D      D    +VNADL   + N VSR  + IL   D +  
Sbjct: 366 LDAEHLRFYLAAKLGPGMDDIDLSFDDFVNKVNADLVGNLINSVSRVSTTIL---DTLDR 422

Query: 379 TPGAFTESDESILS--VCSRVLQEIRENMQNQLIHRALAQ---------VISLVSEVDRY 427
           T G  +E   ++L   +   V    R++    +I  A  Q         +  L   V+RY
Sbjct: 423 TLGTVSEEGLALLEEILTQPVKTGTRDDSIQNIIKTAYEQRNYAKVMREITRLGDRVNRY 482

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +   PW+L K NP++A  ++   +   R LAI L   VPK++ +I+ +L +      F+
Sbjct: 483 VNDNAPWKLIKENPEKAREIVTAVLNASRFLAIYLYPVVPKISEQIYKLLNLKGSPE-FK 541

Query: 488 SLDQ-------RLKPGFMLHKTFD 504
            LD+       ++ P  M+ K  D
Sbjct: 542 DLDKSRILEKTKINPYEMITKRVD 565


>gi|298252448|ref|ZP_06976243.1| methionyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533338|gb|EFH72221.1| methionyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 623

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 244/529 (46%), Gaps = 68/529 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + ++++    G IYKG  
Sbjct: 64  GVSAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQ 122

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 123 KVAISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPR 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFD 215
           + E E YF  L A  +  +++  S   +      R  VI+F   + + +K  +++R   D
Sbjct: 182 FEETEHYFLDLPALAEANVNWLHSREGW------RTNVINFSLGLFNEVKPRAITRD-ID 234

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVI 263
           WGI +P     D+P   +YVW DA+  YL+ +       G    +  W  D      + +
Sbjct: 235 WGIPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFM 294

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G 
Sbjct: 295 GKDNITFHSQIWPSEMLAYNGAGSKGGEAGIYGPLNMPEQVVASEFMTMEGKKFSSSRGI 354

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I
Sbjct: 355 VIYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLI 414

Query: 370 LKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            K++  + P    + T  D ++L   S     +   ++      AL + + +V+++++Y 
Sbjct: 415 NKNFGAIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKYI 474

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            A +PW++K  + DR  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 475 SATEPWKIKD-DEDRLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEAL 522


>gi|30023071|ref|NP_834702.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229130292|ref|ZP_04259251.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|68566040|sp|Q815U6|SYM2_BACCR RecName: Full=Methionyl-tRNA synthetase 2; AltName:
           Full=Methionine--tRNA ligase 2; Short=MetRS 2
 gi|29898631|gb|AAP11903.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228653225|gb|EEL09104.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 544

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 238/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKRSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|218131529|ref|ZP_03460333.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697]
 gi|217986461|gb|EEC52798.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697]
          Length = 680

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 245/513 (47%), Gaps = 43/513 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   E + ++  L  ++  L  +  + H E+   +    +  S++  GL+  ++SR  
Sbjct: 183 QPVM-RETKHWYLPLDKHEAWLRQWILDDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
            DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IGKD 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +     D 
Sbjct: 297 IVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGTVPAAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMSRV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 477 ATILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|68250200|ref|YP_249312.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335378|sp|Q4QJZ5|SYM_HAEI8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68058399|gb|AAX88652.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 682

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSD----KLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|288940932|ref|YP_003443172.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896304|gb|ADC62140.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 683

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 224/505 (44%), Gaps = 42/505 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +   + I++A+ Y N   HIGH  E I  D+ ARF ++ G +  +    D HG  I  
Sbjct: 1   MSQPRDILITSALPYANGPIHIGHLVEYIQTDIWARFQKMRGHNCWYVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  + + +   +       + +D++  T    +     +++++  D G I 
Sbjct: 61  RARQEGITPEQLIARVAEEHQADFAAFRVGFDNYHSTHSPENQHYATLIYERNRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQW---------- 159
           K   +  Y   ++ +  D     E  K GA  QY        A ++P +           
Sbjct: 121 KRMITQAYDPVEQMFLPDRFIKGECPKCGAPDQYGDNCEACGASYSPAELKNPRSAVSGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + YFFRL  ++  L  +        L  E  N++  + ++GL++  +SR    
Sbjct: 181 VPEQRESDHYFFRLGDFETMLKEWTRGGS---LQKEVANKLDEWFEAGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L    P     +FW  D      H IGKDI+
Sbjct: 238 FGFEIPDHPGKFFYVWLDAPIGYMASFQNLCDKTPGLDFDRFWGRDSTAELYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA+++PA L  A    P  +F+HGF+   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 YFHALFFPAMLHGAGFRTPSAIFAHGFLTVDGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    D    + +    RVNADL   + N+ SR    I K +DG +   GA  E +
Sbjct: 358 FAAKLGSSVDDIDLNLEDFTARVNADLVGKVVNIASRCAGFIGKRFDGRL--SGALAEPE 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
             + +        I    + +   RA+ ++++L    ++Y D + PW + K +   A   
Sbjct: 416 --LFAEFIAAGDSIAAAYEKREFSRAVREIMALADRANQYIDEKAPWVVAKQDGREAELQ 473

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLA 470
            +  + + + R L   L+  +P  A
Sbjct: 474 DICSMGLNLFRVLIGYLRPILPATA 498


>gi|187649785|sp|A5VZI8|SYM_PSEP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 679

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 234/521 (44%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSSLIYSRLREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262
             +G +IP +P    YVW+DA   Y+ +   L    P+         GSKA+ +    H 
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELY----HF 291

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  
Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351

Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+   ++  G D    + +   ++VN+DL   + N+ SR    I K  +G++    
Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGD 411

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
           A  E  E+ L+        I E  + +   RA+ ++++L    + +   + PW L K   
Sbjct: 412 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D    +    + + RQL I L+  +P LA      L VA
Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508


>gi|229094153|ref|ZP_04225233.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228689256|gb|EEL43077.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 544

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|85000239|ref|XP_954838.1| methionyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302984|emb|CAI75362.1| methionyl-tRNA synthetase, putative [Theileria annulata]
          Length = 884

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 142/237 (59%), Gaps = 2/237 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++++AIAY N  PH+GHAYE ++ DV++R++R+ G  V+F+TGTDEHG K+  
Sbjct: 288 LENKKPYHLASAIAYTNGLPHVGHAYEAVVCDVISRYYRMFGRRVIFSTGTDEHGIKVLT 347

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T     +  S  F+     L + YD FIRTT + H    + +W+ +  KGDIY
Sbjct: 348 TAKQQNKTPIEVCNYYSNEFKKFYKRLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIY 407

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+R+E +  + E  K  D +       P   M E  YFF++  Y+ +L+ Y 
Sbjct: 408 LGEYNGYYSMREERFIPNTEA-KLTDFK-DPVSGKPYDLMSESSYFFKMERYRTQLVDYI 465

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            ++ +FI P + +NE+++ +K  L DLS+SR +FDWGI++P     I+  +++   N
Sbjct: 466 NTNQDFIYPKKVKNEILTRLKDQLDDLSISRTSFDWGIEVPSTDDIIITEYVNNDVN 522



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 149/262 (56%), Gaps = 9/262 (3%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
             K  ++ +++MYVW DAL+ Y+T++G  ++   S+  +WP DL VIGKDI  F ++   
Sbjct: 589 NTKKQENEKHVMYVWFDALSFYMTSSGLGESL--SEMMYWPTDLQVIGKDISWFQSVILA 646

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               S  LPL +K+ +HGFI    G K+SKSLGNV++  E+++EVGV++ RY+L++    
Sbjct: 647 TMCFSMGLPLTRKILAHGFIQGSDGRKMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVM 706

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D++ LK+  N+DLA+ +GNLV R  S++ K  +G++P+  +  +S   ++    
Sbjct: 707 GSDVNFDQNQLKEMHNSDLADNVGNLVHRLTSLVTKYNEGVVPSYKSKVKSPFDLV---- 762

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             +++  +N+    ++  L        +++ Y     PW  K  N D+  +VL V +E +
Sbjct: 763 EFMKDCSDNVLKLDVYNILILTNMKFKDLNNYLTVTSPWAEK--NQDKRDSVLRVLLECV 820

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             LA  L   +P+    +F  L
Sbjct: 821 YFLAHFLYPVLPQSMEHLFSKL 842


>gi|119476462|ref|ZP_01616813.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450326|gb|EAW31561.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 680

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 223/504 (44%), Gaps = 37/504 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  R+ R  G D ++    D HG  I   A+  
Sbjct: 12  KILVTSALPYANGPLHLGHLLETIQTDIWVRYQRQKGNDCIYVCADDAHGTAIMLTAEKN 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  +           D   I +D++  T    +      ++ K+   G I      
Sbjct: 72  GISPEQQIANIQAAHEKDFDQFLIRFDNYHSTHSAENKRYSEEIYLKLKANGHIASREIM 131

Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y    + +  D            E   G + +   A ++P   ++ +      +  + 
Sbjct: 132 QLYDPEKDLFLADRYIKGTCPKCKTEDQYGDNCEACGATYSPADLIDPKSAVSGATPIEK 191

Query: 175 KLLSYYESHPEF-----------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
               Y+ + P+F            L  E  N++  ++++GL+D  +SR +  +G +IPD 
Sbjct: 192 VSTHYFFTLPDFEQFLRDWTTGDSLQKEISNKLGEWLEAGLQDWDISRDSPYFGFEIPDA 251

Query: 224 PQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPA 277
           P    YVW+DA   Y+ +   Y D    +   +W AD      H IGKDI+ FH ++WPA
Sbjct: 252 PGKYFYVWLDAPIGYMASFQNYCDRSGLNFDDYWGADSEAELYHFIGKDIINFHGLFWPA 311

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L SA    P  +F+HGFI   G+K+SKS G  I     +E +  + LRY+   +++   
Sbjct: 312 MLHSAGYRKPNAIFAHGFITVNGKKMSKSRGTFIMASTYLEHLDPEYLRYYYAAKLSASI 371

Query: 338 DGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           D    + +   +RVN+DL   + N+ SRS   I K  DG M PT        ++++    
Sbjct: 372 DDIDLNLEDFVQRVNSDLVGKVVNIASRSAKFITKGRDGVMSPTLANAELWQQAVIKG-- 429

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVE 453
              +EI E  + +   +A+ ++++L    + YFD Q+PW+L K          V  + + 
Sbjct: 430 ---EEISELYEQREYSKAIREIMALADTTNEYFDGQEPWKLAKEAGKEQLVVDVASLCIN 486

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           + R + I L+  +P  A K    L
Sbjct: 487 LFRLIMIYLRPVLPITAEKASSFL 510


>gi|313886004|ref|ZP_07819742.1| methionine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924534|gb|EFR35305.1| methionine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 683

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 246/519 (47%), Gaps = 43/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  IA  A+
Sbjct: 7   KRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAIKAK 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +  VD+     ++    L I +D + RTT + H  T    + K+ + G + +  
Sbjct: 67  AEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTASAFFTKLYESGKLIEQT 126

Query: 124 YSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQ-----HNPV-----Q 158
              +Y    + +  D           +E   G    A G   +A      H+ +     +
Sbjct: 127 SEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGAKPE 186

Query: 159 WMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             E + ++  L  Y+  L  +  E H E+   +    +  S++  GL+  +++R   DWG
Sbjct: 187 LRETKHWYLPLGDYESFLREWILEGHKEWKPNV--YGQCKSWLDLGLQPRAVTRD-LDWG 243

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P       ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 244 IPVPLQGAEGKVLYVWFDAPIGYISNTKEL-LPDSWRT--WWCDPETRLIHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G+KIS S    I   E ++E+    D LRY
Sbjct: 301 HCIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ TE D
Sbjct: 361 VLTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGSLTEID 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           E +L   + +   + + +++     AL   + L    ++Y    +PW++ K++PDR +T+
Sbjct: 421 EEMLREVAAIPAALDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           L++ ++++  L+I    F P    ++  +L V +    F
Sbjct: 481 LHLALQLVGNLSIAFAPFTPFSTRRLLAMLQVEEGGFAF 519


>gi|218960775|ref|YP_001740550.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729432|emb|CAO80343.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 678

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 237/501 (47%), Gaps = 43/501 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  +++A+ Y N + HIGH A   + AD+  R+ RL G DV++  GTDEHG  I+  A  
Sbjct: 2   KYLVTSALPYANGKLHIGHLAGAYLPADIFVRYLRLKGEDVIYICGTDEHGTPISITADK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V+    + +   + + I +D+F  T+   H+      + ++ +KG I     
Sbjct: 62  EGITPQEVVNYYHNSIKKAFEGIGIEFDNFSGTSRPPHYKLAADFFLQLYNKGYIKPKNT 121

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQ-----------HNPVQ 158
             +Y  +D+ Y  D  V        ++ A G       Q Y                PV 
Sbjct: 122 LQFYCEKDKRYLPDRYVEGICPLCGFEDARGDQCDKCGQIYETTTLIEPKCKICGSTPVI 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E + +F +L  +++KL  +  +   +   +  RN ++  +  GL + S++R    WG+
Sbjct: 182 -KETKHWFLQLEGFREKLKRWLATKDYWKENV--RNFILGLLDQGLVERSVTRD-LSWGV 237

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FW--PAD--LHVIGKDILR 269
            +P  +    ++YVW DA   Y++ T       G   K   +W  P    +H IGKD + 
Sbjct: 238 PVPLPEAKGKVLYVWFDAPIGYISATVEWAEKIGQPEKWKEYWLNPETRLIHFIGKDNII 297

Query: 270 FHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH++ WP+ L+  +    LP  + ++ F+  +G+KIS S    I   E I++   + LRY
Sbjct: 298 FHSLIWPSMLMGQDTIYCLPYDIPANEFMNLEGKKISTSKNWAIWVDEFIQDFDSEYLRY 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L       +D  +     + ++N +L N +GNL +R  +   K+++G I T  A +E+ 
Sbjct: 358 YLAVNAPERQDSDFSFKDFQNKINIELNNTLGNLANRVFAFANKNFEGKI-TACALSETA 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              ++   ++L+EI EN  N  + +    ++ +    +RYFD  KPW   K N D  +  
Sbjct: 417 NKAIAEADKLLKEIEENYLNYQVKKNTRLIMDIARLGNRYFDENKPWAQLKENRDATNET 476

Query: 448 LYVTVEVIRQLAILLQAFVPK 468
           LYV   ++ ++++     +P+
Sbjct: 477 LYVCSNLLAKISVAFSPIMPR 497


>gi|304312862|ref|YP_003812460.1| Methionyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798595|emb|CBL46825.1| Methionyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 707

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 227/510 (44%), Gaps = 42/510 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+  G
Sbjct: 13  ILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKMRGANCHYVCADDAHGTAIMLKAEQLG 72

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            T +  + Q    + RD A  L I +D++  T    +     +++ +  DKG I     +
Sbjct: 73  RTPEEQIAQVKVEHERDFAGFL-IGFDNYYSTHSPENRHFSELIYARNRDKGYIVAREIT 131

Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWME------- 161
             +    + +  D  V       GAD QY          Y AQ   NP   +        
Sbjct: 132 QLFDPEKQMFLADRFVKGTCPKCGADDQYGDNCEVCGATYPAQELKNPRSTISGATPVLK 191

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
                FF L  +Q  L  +  S     L     N++  ++ +GL+   +SR+   +G +I
Sbjct: 192 ANTQLFFDLPRFQAMLEKWIRSG---TLQEGIANKLEEWLSAGLQQWDISREAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L    G      +W  D      H IGKDI+ FH +
Sbjct: 249 PDHPGKYFYVWLDAPIGYMASFKNLCERRGDLDFDHYWRKDSTAELYHFIGKDIISFHGL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A+   P  + SHGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 309 FWPALLTGADFRTPTAICSHGFVTVNGQKMSKSRGTFIKAETYLRHLTPEYLRYYFAAKL 368

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNADL N + NL SR    I K  +G +       +   S+L 
Sbjct: 369 GSRIDDIDLNLEDFVQRVNADLVNKVINLASRCAGFIQKKSNGRLSAAPLRDDVAYSLLQ 428

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY--- 449
                  EI E+ + +   +A+  +++L    ++Y D QKPW L K +P + + V+    
Sbjct: 429 DFMEAGTEIGEHYEQREFSKAIRNIMALADRANQYIDEQKPWALAK-DPQQDTQVVQICS 487

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V + + R L I L+  +P+L+ ++   L +
Sbjct: 488 VGLNLFRLLMIYLKPVLPQLSVEVEAFLAI 517


>gi|332176500|gb|AEE12190.1| Methionyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 683

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 246/519 (47%), Gaps = 43/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  IA  A+
Sbjct: 7   KRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAIKAK 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +  VD+     ++    L I +D + RTT + H  T    + K+ + G + +  
Sbjct: 67  AEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTATAFFTKLYESGKLIEQT 126

Query: 124 YSGWYSLRDEAYYND-----------DEVYKG----ADGQYYNAQ-----HNPV-----Q 158
              +Y    + +  D           +E   G    A G   +A      H+ +     +
Sbjct: 127 SEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGAKPE 186

Query: 159 WMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             E + ++  L  Y+  L  +  E H E+   +    +  S++  GL+  +++R   DWG
Sbjct: 187 LRETKHWYLPLGDYESFLREWILEGHKEWKPNV--YGQCKSWLDLGLQPRAVTRD-LDWG 243

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P       ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 244 IPVPLQGAEGKVLYVWFDAPIGYISNTKEL-LPDSWRT--WWCDPETRLIHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G+KIS S    I   E ++E+    D LRY
Sbjct: 301 HCIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ TE D
Sbjct: 361 VLTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGSLTEID 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           E +L   + +   + + +++     AL   + L    ++Y    +PW++ K++PDR +T+
Sbjct: 421 EEMLREVAAIPAALDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATI 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           L++ ++++  L+I    F P    ++  +L V +    F
Sbjct: 481 LHLALQLVGNLSIAFAPFTPFSTRRLLAMLQVEEGGFAF 519


>gi|104780428|ref|YP_606926.1| methionyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|122985938|sp|Q1IDZ3|SYM_PSEE4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|95109415|emb|CAK14115.1| methionyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 679

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 234/521 (44%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T  + + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSEENRELSGLIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN-----------PDGSKAKFWPADLHV 262
             +G +IP +P    YVW+DA   Y+ +   L              +GSKA+ +    H 
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWSEGSKAELY----HF 291

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  +    P  V  HG++   G K+SKS G  I     ++ +  
Sbjct: 292 IGKDIVNFHALFWPAMLEGSGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351

Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+   ++  G D    + +   ++VN+DL   + N+ SR    I K  DG++    
Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVAGD 411

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
           A  +  E+ L+        I E  +++   RA+ ++++L    + +   + PW L K   
Sbjct: 412 AAPDLTEAFLAAAP----SIAEAYESRDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +    +    + + RQL I L+  +P LA      L VA
Sbjct: 468 KQEEVQAICAQGINLFRQLVIFLKPVLPLLAADAEAFLNVA 508


>gi|309973006|gb|ADO96207.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 682

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWVEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DES+ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDESLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKSPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+   L   L+  +PKLA +
Sbjct: 478 MGIELFHVLMSYLKPVLPKLAER 500


>gi|255020628|ref|ZP_05292690.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969864|gb|EET27364.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 680

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 224/511 (43%), Gaps = 46/511 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E    D+  R+H+L G D ++    D HG  I   AQ
Sbjct: 2   KRKILVTSALPYANGPLHLGHLVEYTQTDIWVRYHKLRGHDCVYVCADDAHGTPIMLRAQ 61

Query: 64  NAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTE-----------KRHHDTCRILWK 111
           + G++ +  V++  + + RD      I +D +  T             +R      I+ +
Sbjct: 62  SEGISPETLVERMQKEHLRDFT-AFGIGFDCYHSTHSPENFTISQDIYRRLRAAEHIVVR 120

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE--------- 162
           +I    D   G +     +R            G + +   A ++P   ++          
Sbjct: 121 EIEQAFDPVAGIFLPDRFIRGTCPKCGAADQYGDNCEVCGATYSPTDLVDAVSAVSGATP 180

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E YFF LS + D L  +  S     L  E  N++  + K+GL D  +SR    +G
Sbjct: 181 VRRPTEHYFFTLSDFADFLQEWIHSG---TLQEEMANKLDEWFKAGLADWDISRDAPYFG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL-----HVIGKDILRFH 271
           I IPD      YVW+DAL  Y+  T +     G     +W A       H IGKDI+ FH
Sbjct: 238 IPIPDTEGKFFYVWLDALPGYMAATTHWCEEHGRDFDTYWGAQAQSEVYHFIGKDIIYFH 297

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A   LP  +F+HGF+   G K+SKS G  I     +E +  + LRY+   
Sbjct: 298 ALFWPAMLKGAGYRLPTAIFTHGFMTVNGAKMSKSRGTSITAARYLERLEPEFLRYYFAS 357

Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDES 389
           ++    +D   + +    + N DL   + NL +RS   I +   G + P+ G     D +
Sbjct: 358 KLNPRPEDIDLNLEDFLLKGNGDLVGKVVNLAARSAGFIHQFGGGRLAPSLG----EDAT 413

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
             +  +   + I      +   RA+  ++++   V+ Y D   PW+L K +P +   +L 
Sbjct: 414 FYAELAGQRERIGAAYAERDYARAIRDIMAMADRVNAYVDRHAPWQLAK-DPAQREVLLR 472

Query: 450 V---TVEVIRQLAILLQAFVPKLANKIFDIL 477
           V   T+   R L  LL   VP+LA +  D L
Sbjct: 473 VATTTLNAFRLLITLLSPVVPQLARRSLDFL 503


>gi|88801601|ref|ZP_01117129.1| methionyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782259|gb|EAR13436.1| methionyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 684

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 239/517 (46%), Gaps = 41/517 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV +  G+DEHG  I 
Sbjct: 1   MSAPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLIGKDVAYICGSDEHGVAIP 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GV+ +  +D+     +       IS+D++ RT+ + HH T    + K+ + GD 
Sbjct: 61  MRAKKEGVSPQHIIDKYHGIIKQSFLDFGISFDNYSRTSNELHHKTASEFFTKLHNNGDF 120

Query: 120 YKGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWMEEEG--- 164
            +   +  Y      +  D            +E Y G   +     HN    +  +    
Sbjct: 121 IEETSAQLYDAEANQFLADRFVVGTCPKCNFEESY-GDQCESCGTSHNATDLINPKSAIT 179

Query: 165 -----------YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                      +F  L  ++D L  +  E H +   P     +V S+++ GL+  +++R 
Sbjct: 180 GNVPTVKKTKHWFLPLDKHEDFLREWILEGHKKDWKP-NVYGQVKSWIEDGLRPRAVTRD 238

Query: 213 TFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGK 265
             DWGI +P  +    ++YVW DA   Y+++T      +G   + +W  D    +H IGK
Sbjct: 239 -LDWGIPVPLKEADGKVLYVWFDAPIGYISSTKEWAAREGKNWEDYWKRDDTKLVHFIGK 297

Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GV 322
           D + FH I +P+ L +  +  LP  V ++ F+  +G K+S S    +   E + E     
Sbjct: 298 DNIVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLAEFPNQQ 357

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY L       KD  +     + + N +L    GN ++R V +  K Y G++P P  
Sbjct: 358 DVLRYTLTANAPENKDNDFTWKDFQAKNNNELVAIFGNFINRVVVLTNKYYGGVVPAPND 417

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           F++ DE  L+        I ++++      A  ++++L    ++Y   ++PW++ K +  
Sbjct: 418 FSDIDEDTLAAVKEFPNTIGKSIERYRFREASQELMNLARLGNKYLADEEPWKVIKLDEK 477

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           R  T+LYV +++   LA++ + F+P  A K+  IL +
Sbjct: 478 RVQTILYVALQISAALAVVSEPFLPFTAKKLKGILNI 514


>gi|262191524|ref|ZP_06049707.1| methionyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032578|gb|EEY51133.1| methionyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 683

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 226/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +     F E +  +
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKL--SAHFAEPE--L 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448
            +  S     I E  + +   RA+ ++ +L  + ++Y D + PW + K+   D+A   + 
Sbjct: 418 YAEFSGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 478 TVGINLFRVLMTYLKPVMPALAER 501


>gi|262171953|ref|ZP_06039631.1| methionyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893029|gb|EEY39015.1| methionyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 683

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQIAEPELYAEF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448
                R    I E  + +   RA+ ++ +L  + ++Y D + PW + K+   D+A   + 
Sbjct: 422 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 478 TVGINLFRVLVTYLKPVMPALAER 501


>gi|161582014|ref|NP_230681.2| methionyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|255745456|ref|ZP_05419404.1| methionyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262151292|ref|ZP_06028427.1| methionyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|25009403|sp|Q9KT69|SYM_VIBCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|255736531|gb|EET91928.1| methionyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030908|gb|EEY49537.1| methionyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 683

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 422 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 476 ICTVGINLFRVLMTYLKPVMPALAER 501


>gi|327483748|gb|AEA78155.1| Methionyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 683

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448
                R    I E  + +   RA+ ++ +L  + ++Y D + PW + K+   D+A   + 
Sbjct: 422 AGAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 478 TVGINLFRVLMTYLKPVMPALAER 501


>gi|330502374|ref|YP_004379243.1| methionyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916660|gb|AEB57491.1| methionyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 683

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 224/507 (44%), Gaps = 44/507 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E +  D+  R+ +L G   ++    D HG  I  
Sbjct: 6   MTEARKILVTSALPYANGSIHLGHMLEYVQTDMWVRYQKLRGNQAIYVCADDAHGSAIML 65

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +D   + +  D AD   + +D++  T  + + +    ++  + DKG I
Sbjct: 66  RAEKEGITPEQLIDGVRAEHMADFAD-FGVDFDNYHSTHSEENRELSASIYLALRDKGHI 124

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160
                + ++      +  D  +       G + QY        A ++P +          
Sbjct: 125 ATRAVTQYFDPEKGMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYSPTELKNPRSAISG 184

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +FF+L  ++  L  +  S     L     N++  ++  GL++  +SR   
Sbjct: 185 AVPVLKESQHFFFKLPDFEAMLKQWTRSG---ALQEAVANKIAEWLDGGLQEWDISRDAP 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IP +P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 242 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCRKRPELDFDAFWGKDSSAELYHFIGKDI 301

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 302 VNFHALFWPAMLEGAGYRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRY 361

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++         
Sbjct: 362 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGLL----VAANP 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           +  +          I E  + +   RA+ ++++L    + +   + PW L K    +A  
Sbjct: 418 EPELWDAFQAAAPSIAEAYEARDFSRAMREIMALADRANAWIADKAPWALNKVEGKQAEV 477

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLAN 471
             +  + V + RQL I+L+  +PKLA+
Sbjct: 478 QEICALGVNLFRQLVIMLKPVLPKLAS 504


>gi|239501264|ref|ZP_04660574.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 687

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|118602577|ref|YP_903792.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|187647764|sp|A1AWL4|SYM_RUTMC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118567516|gb|ABL02321.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 550

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 242/539 (44%), Gaps = 49/539 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N + H+GH  E I AD+  RF ++ G +  +    D HG  I   +   
Sbjct: 5   KILVTSALPYANGEIHLGHLLEYIQADIWVRFQKMMGNECYYVCADDTHGTPIMLKSDEL 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +       I +  +  T  + + D    ++ K++D G I     S
Sbjct: 65  GITPETLIKGVSERHQADFKEFSIGFSKYHSTHSQENKDISANIYHKLNDAGFIKTRIIS 124

Query: 126 GWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPVQWM-------------- 160
             +    + +  D     D    GA+ QY          ++P +                
Sbjct: 125 QAFDPEKQMFLPDRFIKGDCPKCGANDQYGDNCEICGVTYSPTELKNAKSIISDATPIAK 184

Query: 161 EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           + E YFF L  ++ +L ++  E H    L  E  N++  + + GL+   +SR    +G +
Sbjct: 185 DSEHYFFDLPQFETQLKAWIKEGH----LQDEVSNKLSEWFEQGLQQWDISRDAPYFGFQ 240

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +   L +  G    +++  D      H IGKDI+ FHA+
Sbjct: 241 IPDVEGKYFYVWLDAPIGYMASFKKLCDEQGLDFDEYFNKDSNTELYHFIGKDIVYFHAL 300

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L+ +N   P  +F HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 301 FWPAILMGSNYRTPSAIFVHGFLTVNGQKMSKSRGTFIQARTYLNHLNPECLRYYYAYKL 360

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +   D    +    K+RVN+DL   + N+ SRS   ++K ++  +       E     ++
Sbjct: 361 SAKIDDIDLNLTDFKQRVNSDLVGKVVNIASRSTGFLVKKFNKTLSDYAIDPELYHEFVA 420

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            C  +   I+++ + +  ++A+ +++ L  + ++Y D  KPW+L K +  +   V  + +
Sbjct: 421 -CGDI---IKKHYEARNYNQAMREIMKLADKANQYIDEHKPWQLVKKDTKQVHDVTSLAI 476

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFDPIFPR 509
            + R L   L+  +P +A +    L +   N       Q LK     H+  TF P+  R
Sbjct: 477 NLFRVLMTYLKPVLPVMAKQAEMFLNIDAFNW------QDLKRPLTKHQINTFKPLMSR 529


>gi|83644722|ref|YP_433157.1| methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123739980|sp|Q2SKU2|SYM_HAHCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83632765|gb|ABC28732.1| Methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 681

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 226/505 (44%), Gaps = 47/505 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K+ +++A+ Y N   H+GH  E I  D+  RF +L G    +    D HG  I   A
Sbjct: 4   EPRKILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGHQCTYVCADDAHGTAIMLKA 63

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  G+T +  +DQ N+ + RD A+ L I +D++  T  + + +    ++K   D G I  
Sbjct: 64  EQMGITPEQLIDQVNADHRRDFAEFL-IEFDNYYSTHSEENRELSSYIYKACLDAGKIAT 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160
              +  Y   ++  +  D   KG      A+ QY       ++ + P + +         
Sbjct: 123 RTITQAYD-PEKNLFLADRFIKGTCPKCKAEDQYGDNCEVCSSTYTPAELINPRSAISGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E   +FF+L  +Q+ L  +  S     L  +  N++  ++ +GL++  +SR    
Sbjct: 182 TPIEKESTHFFFKLPDFQEFLQKWTRSG---TLQPQIANKLAEWLDAGLQEWDISRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L     D    ++W  D      H IGKDI+
Sbjct: 239 FGFEIPDQPGKFFYVWLDAPIGYMASFKNLCARRADLDFDEYWKKDSTAELYHFIGKDII 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WP+ L  A+   P  V++HGF+   G K+SKS G  I     +E +  + LRY+
Sbjct: 299 NFHALFWPSMLSCADFRTPSAVYAHGFVTVDGAKMSKSRGTFIMARTYLEHLNPEYLRYY 358

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    D    +      +VNADL   + N+ SR    I K    + P      E  
Sbjct: 359 FAAKLTSNVDDLDLNLQDFTLKVNADLVGKLVNIASRCAKFITKAGGKLSPQISE-PELI 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
           E  LS    + Q      +++   +A+ ++++L    ++Y D + PW+L K         
Sbjct: 418 EQFLSKSDFIAQA----YEDREFGKAVREIMALADLANKYIDEKAPWKLAKEEGKEQEVL 473

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLA 470
            V  V V + R L   L   +P +A
Sbjct: 474 DVCSVGVNLFRILITYLAPVLPGVA 498


>gi|253996891|ref|YP_003048955.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983570|gb|ACT48428.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 690

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 234/512 (45%), Gaps = 47/512 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RFH++ G  V +    D HG  I   A+  
Sbjct: 9   KILVTSALPYANGSIHLGHLVEYIQTDIWVRFHKMQGHHVHYVCADDTHGTPIMLRAEKQ 68

Query: 66  GVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + + +  +  D ++ L + +D++  T    + +  + ++KK+   G I     
Sbjct: 69  GITPEALIANVHKEHAADFSEFL-VQFDNYYSTNAPENKELSQSIYKKLKAAGKISTKTI 127

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
             +Y      +   D   KG      A  QY        A +NP + +            
Sbjct: 128 EQFYDPVKNMFL-PDRFIKGECPKCHAKDQYGDSCEVCGATYNPTELINAYSAVSGATPV 186

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+LS  +  L  +  S     L  E  N++  + ++GL D  +SR    +G 
Sbjct: 187 RKETEHYFFKLSECEQFLRDWTRSG---TLQGEAANKMGEWFENGLNDWDISRDAPYFGF 243

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   Y+ +   L    G    ++W  D      H IGKDIL FHA
Sbjct: 244 EIPDAPGKYFYVWLDAPIGYMASFKKLCETIGLDFDEYWQKDSKTELYHFIGKDILYFHA 303

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-DALRYFLVR 331
           ++WPA L  +    P ++F+HGF+   GEK+SKS G  I     +E +   + LRY+   
Sbjct: 304 LFWPATLEYSEHRKPTQIFAHGFLTVNGEKMSKSRGTFITARSYLEHIKTPEYLRYYYAA 363

Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++ +  +D   + +    RVN+DL     N+ SR+   I K ++G +  P A    +  +
Sbjct: 364 KLNSTMEDIDLNLEDFVARVNSDLVGKYINIASRTAGFINKRFEGKL-NPSA----NNPV 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
           ++        + E+   +   +AL +++ L    + +   + PW + K     A+   V 
Sbjct: 419 IAEIKASAATLAESYSEREYSKALREIMRLADVANGFVAEKAPWVMAKQEGQDAALQQVC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +E+ R L + L+  +PKLA +I   L +A
Sbjct: 479 SDALEMFRLLTLYLKPVLPKLAGEIEQFLNIA 510


>gi|193076558|gb|ABO11218.2| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 687

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|262402619|ref|ZP_06079180.1| methionyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351401|gb|EEZ00534.1| methionyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 683

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPELYAEF 421

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 422 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 476 ICTVGINLFRVLMTYLKPVMPALAER 501


>gi|254468593|ref|ZP_05081999.1| methionyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087403|gb|EDZ64686.1| methionyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 675

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 241/527 (45%), Gaps = 46/527 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ I++A+ Y N   H+GH  E I  D+ +R+ +++G +V +    D HG  I   AQN 
Sbjct: 3   RILITSALPYANGSIHLGHLVEYIQTDIWSRYQKMNGHEVFYVCADDTHGTPIMIKAQNE 62

Query: 66  GVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T K  + + +  + +D AD   +++D+F  T  K +      ++K +     I     
Sbjct: 63  GITPKQLIANVHKEHAQDFADFY-VNFDNFYTTDSKENQLYSEEIFKSLDRNKKISTKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
             ++   D+  +  D   KG                A G  Y+     NP   +      
Sbjct: 122 EQYFD-EDKQMFLPDRFIKGECPKCNVKDQYGDSCEACGATYSPTDLVNPYSALSGTTPI 180

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + + +FF LS  +  L  +  S     L  E  N++  + KSGL+D  ++R    +G 
Sbjct: 181 KKKTKHFFFNLSECEQFLKDWTTSG---TLQFEAENKIQEWFKSGLQDWDITRDKPYFGF 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
            IP +     YVW+DA   Y+ +   L +  G+     FW  D      H IGKDIL FH
Sbjct: 238 LIPGETDKYFYVWLDAPIGYMASFKNLIDQKGNINFDDFWSPDSSTELYHFIGKDILYFH 297

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-DALRYFLV 330
           A++WPA L  A    P K+F+HGF+   GEK+SKS G  I     +  +   + LRY+  
Sbjct: 298 ALFWPATLNFAGFRKPTKIFAHGFLTVNGEKMSKSRGTFITARSFLNNINEPEFLRYYFA 357

Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDE 388
            ++     D   + D L  +VN+DL   + N+ SR+   I K ++G I +     ++S  
Sbjct: 358 SKLNDSMSDIDLNLDDLMSKVNSDLVGKLVNIPSRTFGFIHKLFNGKIKSIDQLASDSKY 417

Query: 389 SILSVCSRVLQ-EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444
           S L + S  L+ EI +  +++L  + + +V +LV EV+     ++PW L K    N  + 
Sbjct: 418 SQLVIKSIDLKSEILDLYESRLYSQLVRKVFTLVEEVNELISDEQPWSLAKDLEQNKVQL 477

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +L  +  V R   I L   +P L+ ++  +    D N   Q  D 
Sbjct: 478 HNILTTSAIVFRNSIIYLSPILPNLSKEVASLFNETDFNSFNQIKDN 524


>gi|229193317|ref|ZP_04320267.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228590118|gb|EEK47987.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 544

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 236/511 (46%), Gaps = 41/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D           E  +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRTVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273
               +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH++
Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL   
Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N++L    GN V+R++  I K Y G++P      E  + +  
Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV-- 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               + +++ E ++      AL  V   V   ++YFD ++PW+ ++ +P      +Y  V
Sbjct: 418 --EGLYKQVGEAIEQTKFKVALETVFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +I   A LL+ F+P  + ++ + L +   N
Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVKRN 506


>gi|118480122|ref|YP_897273.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196047520|ref|ZP_03114730.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225867021|ref|YP_002752399.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|187645699|sp|A0RKM3|SYM1_BACAH RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|254782850|sp|C1EYD5|SYM_BACC3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118419347|gb|ABK87766.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196021634|gb|EDX60331.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225787890|gb|ACO28107.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
          Length = 544

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPTRIDSVKPLF 524


>gi|24216617|ref|NP_714098.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|68566008|sp|Q8EZD6|SYM_LEPIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24197948|gb|AAN51116.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 715

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 84/558 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  RF +  G +  F    D HG  +  AA+  G
Sbjct: 10  ILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAARKEG 69

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T +  +++    ++RD+     I YD +  T  K + +  + ++ K+  KG I +    
Sbjct: 70  ITPEQLIERVGQEHYRDLTS-FGIEYDHYDSTHSKANQEISKDIYLKLKSKGHISRRSIE 128

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEE------------ 162
             Y   D+ +  D  +             G + +   A ++P   ++             
Sbjct: 129 QSYCETDKMFLPDRFIKGTCPNCKSKDQYGDNCEVCGATYSPKDLIDSHCSLCGTSPVVK 188

Query: 163 --EGYFFRLSAYQDK--------------------LLSYYESHPEFILPIERRNEVISFV 200
             +  FF+L  +  K                    L S+ E+          + ++  + 
Sbjct: 189 NSDHIFFKLGDFHKKDEKSTSLETINPSHLKTDFDLQSWIETSGVVSESEGVKKKLKEWF 248

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------GYLDNPDGSKAK 254
            +GL+D  +SR    +G +IPD+     YVW+DA   Y+ ++       + + P+   + 
Sbjct: 249 DAGLQDWDISRDGPYFGFEIPDETNKYFYVWLDAPIGYMASSKNFFEKNFPNEPNKFDS- 307

Query: 255 FWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           FW       +H IGKDIL FH ++WPA L  ++   P KV  HGFI   GEK+SKS G  
Sbjct: 308 FWKNKNSEIVHFIGKDILYFHTLFWPAMLEGSDYRAPSKVHVHGFIGVNGEKMSKSRGTF 367

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVSRSV 366
           I     ++ +  + LR++L  ++  G D     F D      +VN+DL   + N VSR  
Sbjct: 368 IKAETFVKYLDPEHLRFYLASKLGPGMDDIDLSFED---FINKVNSDLVGNLINSVSRVS 424

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR-----ENMQNQLIH--------RA 413
           + IL   D +  T G    S E +  +   + Q ++     +++QN + +        + 
Sbjct: 425 TTIL---DALDRTLGVV--SKEGLALIEEILYQTVKFGPGEDSIQNIIKYAYDQRNYAKV 479

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L ++  L   V+RY +   PW+L K NP++A  V+ VT+   R LAI L   VPK++ +I
Sbjct: 480 LREITRLGDRVNRYVNDNAPWKLIKENPEKAREVVTVTLNASRFLAIYLYPVVPKISEQI 539

Query: 474 FDILFVADENRCFQSLDQ 491
           + +L + D +  F+ LD+
Sbjct: 540 YKLLNLQD-SPSFKDLDK 556


>gi|261253533|ref|ZP_05946106.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936924|gb|EEX92913.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 686

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 221/503 (43%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161
             +    E +  D  V KG      ++ QY +   N      P + ++            
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLQEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGEKNKFFYVWLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E      
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLSANFAEPELYNEFA 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 423 AAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R L   L+  +P+LA +
Sbjct: 479 VGINLFRVLMTYLKPVMPELAAR 501


>gi|184157057|ref|YP_001845396.1| methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|294840441|ref|ZP_06785124.1| methionyl-tRNA synthetase [Acinetobacter sp. 6014059]
 gi|183208651|gb|ACC56049.1| Methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|322506956|gb|ADX02410.1| metG [Acinetobacter baumannii 1656-2]
 gi|323516823|gb|ADX91204.1| methionyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 687

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 242/546 (44%), Gaps = 69/546 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDF---------IRTTEK--RHHDTCRILWKKI 113
           G++  +   +    + RD  D   + +D +          R+T+   ++ +   I  + +
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 114 SDKGDIYKGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME-- 161
           +   D  KG +             + E  Y D  EV     G  YNA    NP   +   
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGA 177

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    
Sbjct: 178 TPVEKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPY 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
           +G +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI
Sbjct: 236 FGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY
Sbjct: 296 VYFHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRY 355

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++ 
Sbjct: 356 YFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDL 415

Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            +S +     +    E RE         A+ ++++L    ++Y D +KPW L K      
Sbjct: 416 VQSFIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQ 469

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSL 489
               V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L
Sbjct: 470 QVLDVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPL 529

Query: 490 DQRLKP 495
            QR+ P
Sbjct: 530 MQRVDP 535


>gi|169797030|ref|YP_001714823.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213156565|ref|YP_002318226.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215484490|ref|YP_002326725.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
           [Acinetobacter baumannii AB307-0294]
 gi|260555678|ref|ZP_05827898.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|294836744|ref|ZP_06781427.1| methionyl-tRNA synthetase [Acinetobacter sp. 6013113]
 gi|294859425|ref|ZP_06797194.1| methionyl-tRNA synthetase [Acinetobacter sp. 6013150]
 gi|301347637|ref|ZP_07228378.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301513326|ref|ZP_07238563.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301595850|ref|ZP_07240858.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169149957|emb|CAM87851.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213055725|gb|ACJ40627.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987234|gb|ACJ57533.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
           [Acinetobacter baumannii AB307-0294]
 gi|260410589|gb|EEX03887.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 687

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++ D L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|255348394|ref|ZP_05380401.1| methionyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502935|ref|ZP_05381325.1| methionyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 550

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 237/514 (46%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + NP+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ +++ E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDVAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|300722469|ref|YP_003711757.1| methionine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628974|emb|CBJ89559.1| methionine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 675

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 224/501 (44%), Gaps = 44/501 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+HR+ G +V F    D HG  I   AQ +
Sbjct: 7   KLLVTCALPYANGPIHLGHILEHIQADIWVRYHRMRGKEVHFVCADDAHGTPIMLKAQQS 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  + + S   +       ISYD++  T  + +      ++ ++   G I     S
Sbjct: 67  GLSPEEMIAKVSLEHQQDFAGFAISYDNYHSTHSEENKALASHIYLELKKNGYIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------- 160
             +   ++  +  D   KG      A+ QY          ++P + +             
Sbjct: 127 QLFD-PEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCGTTYSPTELINPRSVVSGATPEM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  + D L  +  S     L  +  N++  +  +GL+   ++R    +G +
Sbjct: 186 RDTEHFFFDLPVFSDMLQKWTRSG---TLQEQVANKMQEWFDAGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+     L     D +  +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDQPGKYFYVWLDAPIGYMGAFKNLCDKRSDLNFDEFWEKDSKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG+I   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNYRKPTNLFVHGYITVNGTKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   D    + +   +RVN+D+ N + NL SR+   I K + G +    A    D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFGGKLSAQLA----DPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                    I E+  N+   +A+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 QKFVDAAHVIEEDFTNREFSKAIREMMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLA 470
           + + + R L   L+  +P L+
Sbjct: 479 MGINLFRVLMTYLKPVLPGLS 499


>gi|229175733|ref|ZP_04303239.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228607684|gb|EEK65000.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 544

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 236/511 (46%), Gaps = 41/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKAVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F L  +Q ++    E +  E             +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKEAVEIAKQEGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273
               +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH+I
Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDREAKTYYVHGKDNIPFHSI 299

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL   
Sbjct: 300 IWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N++L    GN V+R++  I K YDG++P      E  E +  
Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPNGMINEELKEKVEG 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +   V     E+++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V
Sbjct: 420 LYIYV----GESIEQTKFKVALETIFDAVRFANKYFDERQPWKQREDDPVSCEETIYNCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +I   A LL+ F+P  + ++ + L + + N
Sbjct: 476 YLIANFANLLEPFLPFSSERVRNTLSIVNRN 506


>gi|152995574|ref|YP_001340409.1| methionyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836498|gb|ABR70474.1| methionyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 678

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 229/506 (45%), Gaps = 48/506 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           + + K+ +++A+ Y N   H+GH  E I  D+  RF ++ G         D HG  I  K
Sbjct: 3   QTQRKILVTSALPYANGSIHLGHMLEHIQTDIWVRFQKMRGHLCTAVCADDAHGTAIMIK 62

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AAQN G+T++  ++     +  D  D L I YD++  T  + + +    ++K + D G I
Sbjct: 63  AAQN-GITSEELIEGVRQEHMADFNDFL-IGYDNYYSTHSEENREFSNSIYKALRDNGKI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
                   Y    E +  D    KG      A+ QY       +A + P++ +       
Sbjct: 121 AVRSIVQAYDPEKEMFLAD-RFIKGTCPKCKAEDQYGDNCEVCSATYTPMEMINPRSVYS 179

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + E YFF+L  +QD L  +  S     L  +  N++  ++ SGLK+  +SR  
Sbjct: 180 GATPIEKDSEHYFFKLPDFQDFLAKWTRSG---TLQDQVANKLSEWLDSGLKEWDISRDA 236

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKD 266
             +G +IPD P    YVW+DA   Y+ +   L D  +G +   +W  D      H IGKD
Sbjct: 237 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDRTEGLEFDDYWAKDSDAELYHFIGKD 296

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A    P  V +HG++   GEK+SKS G  I     ++ +    LR
Sbjct: 297 IINFHALFWPAMLDCAGYRTPTAVNAHGYVTVDGEKMSKSRGTFIKARTYLKHLDPQYLR 356

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++    D          +RVN+D+   + N+ SR+ S I K +DG + +  +  E
Sbjct: 357 YYYAAKLNSRVDDIDLSLSDFLQRVNSDIVGKVVNIASRTASFINKKFDGQLASDVSEAE 416

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--R 443
             +S +         I E+ + +   +A+ +++ L    + Y   Q PW L K      +
Sbjct: 417 MIQSFIDAGDL----IAEHFEGREYGKAIREIMRLADVANEYIAVQAPWVLAKDEATLPQ 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL 469
              V  V + +   LA  L+  +P L
Sbjct: 473 VQAVCTVALNLFSILATYLKPVMPNL 498


>gi|45658951|ref|YP_003037.1| methionyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|68565987|sp|Q72MR4|SYM_LEPIC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45602196|gb|AAS71674.1| methionyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 715

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 84/558 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  RF +  G +  F    D HG  +  AA+  G
Sbjct: 10  ILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAARKEG 69

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T +  +++    ++RD+     I YD +  T  K + +  + ++ K+  KG I +    
Sbjct: 70  ITPEQLIERVGQEHYRDLTS-FGIEYDHYDSTHSKANQEISKDIYLKLKSKGHISRRSIE 128

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEE------------ 162
             Y   D+ +  D  +             G + +   A ++P   ++             
Sbjct: 129 QSYCETDKMFLPDRFIKGTCPNCKSKDQYGDNCEVCGATYSPKDLIDSHCSLCGTSPVVK 188

Query: 163 --EGYFFRLSAYQDK--------------------LLSYYESHPEFILPIERRNEVISFV 200
             +  FF+L  +  K                    L S+ E+          + ++  + 
Sbjct: 189 NSDHIFFKLGDFHKKDEKSTSLETINPSHLKTDFDLQSWIETSGVVSESEGVKKKLKEWF 248

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------GYLDNPDGSKAK 254
            +GL+D  +SR    +G +IPD+     YVW+DA   Y+ ++       + + P+   + 
Sbjct: 249 DAGLQDWDISRDGPYFGFEIPDETNKYFYVWLDAPIGYMASSKNFFEKNFPNEPNKFDS- 307

Query: 255 FWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           FW       +H IGKDIL FH ++WPA L  ++   P KV  HGFI   GEK+SKS G  
Sbjct: 308 FWKNKNSEIVHFIGKDILYFHTLFWPAMLEGSDYRAPSKVHVHGFIGVNGEKMSKSRGTF 367

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVSRSV 366
           I     ++ +  + LR++L  ++  G D     F D      +VN+DL   + N VSR  
Sbjct: 368 IKAETFVKYLDPEHLRFYLASKLGPGMDDIDLSFED---FINKVNSDLVGNLINSVSRVS 424

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR-----ENMQNQLIH--------RA 413
           + IL   D +  T G    S E +  +   + Q ++     +++QN + +        + 
Sbjct: 425 TTIL---DALDRTLGVV--SKEGLALIEEILYQTVKFGPGEDSIQNIIKYAYDQRNYAKV 479

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L ++  L   V+RY +   PW+L K NP++A  V+ VT+   R LAI L   VPK++ +I
Sbjct: 480 LREITRLGDRVNRYVNDNAPWKLIKENPEKAREVVTVTLNASRFLAIYLYPVVPKISEQI 539

Query: 474 FDILFVADENRCFQSLDQ 491
           + +L + D +  F+ LD+
Sbjct: 540 YKLLNLQD-SPSFKDLDK 556


>gi|121587393|ref|ZP_01677163.1| methionyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153819292|ref|ZP_01971959.1| methionyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153822399|ref|ZP_01975066.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081209|ref|YP_002809760.1| methionyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254848166|ref|ZP_05237516.1| methionyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298498854|ref|ZP_07008661.1| methionyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655500|gb|AAF94195.1| methionyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121548396|gb|EAX58458.1| methionyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510152|gb|EAZ72746.1| methionyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126520106|gb|EAZ77329.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227009097|gb|ACP05309.1| methionyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254843871|gb|EET22285.1| methionyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297543187|gb|EFH79237.1| methionyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 731

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549


>gi|26987833|ref|NP_743258.1| methionyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|37999413|sp|Q88NV7|SYM_PSEPK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24982533|gb|AAN66722.1|AE016300_7 methionyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 679

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 233/521 (44%), Gaps = 54/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L + +D+F  T    + +   +++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFL-VDFDNFHSTHSDENRELSSLIYSRLREAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQW-------- 159
                + ++   ++  +  D   KG      A+ QY        A + P +         
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAIS 178

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR  
Sbjct: 179 GATPVLRDSQHFFFKLPDFQAMLQQWTRSG---TLQDAVANKLAEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPD---------GSKAKFWPADLHV 262
             +G +IP +P    YVW+DA   Y+ +   L    P+         GSKA+ +    H 
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWHEGSKAELY----HF 291

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  
Sbjct: 292 IGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQP 351

Query: 323 DALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+   ++  G D    + +   ++VN+DL   + N+ SR    I K  +G++    
Sbjct: 352 EYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGD 411

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
           A  E  E+ L+        I E  + +   RA+ ++++L    + +   + PW L K   
Sbjct: 412 AAPELTEAFLAAAP----SIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEG 467

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D    +    + + RQL I L+  +P LA      L VA
Sbjct: 468 KQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVA 508


>gi|262167212|ref|ZP_06034924.1| methionyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|187651896|sp|A5F2P8|SYM_VIBC3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|262024356|gb|EEY43045.1| methionyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 683

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 225/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G  +  ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 422 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 476 ICTVGINLFRILMTYLKPVMPALAER 501


>gi|226939673|ref|YP_002794746.1| methionyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226714599|gb|ACO73737.1| Sym [Laribacter hongkongensis HLHK9]
          Length = 684

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 238/560 (42%), Gaps = 71/560 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + ++ +++A+ Y N   H+GH  E I  DV  RF ++ G +  +    D HG  I  AA+
Sbjct: 3   KRQILVTSALPYANGAIHLGHMVEHIQTDVWVRFQKMRGHECHYVCADDTHGSPIMLAAE 62

Query: 64  NAGVTTKVFV----DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+T +  +    D++  +F        I YD++  T    +      ++K +     I
Sbjct: 63  KQGITPEALIARVRDEHLADFTG----FHIGYDNYYSTNSPENKAFAEQIYKTLRASDKI 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME------- 161
                   +    + +  D  V       GA  QY        A ++P +          
Sbjct: 119 VSRTIEQLFDPEKQMFLPDRFVKGECPKCGARDQYGDNCEVCGATYSPTELKNPYSAVSG 178

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFI-------LPIERRNEVISFVKSGLKDL 207
                   E YFFRL    D L  +     E         L  E  N++  +++ GL+D 
Sbjct: 179 ATPVLKTSEHYFFRLGECADFLKDWTAGSSERADGAVQPHLQPESLNKMNEWIEGGLQDW 238

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWP 257
            +SR    +G +IPD P    YVW+DA   Y+ +   L +  G          SKA+ + 
Sbjct: 239 DISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFQNLCDRIGIDFNEWFKADSKAEMY- 297

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  A    P  VF+HGF+   G+K+SKS G  I     +
Sbjct: 298 ---HFIGKDILYFHALFWPAMLKYAGYRTPTGVFAHGFLTVDGQKMSKSRGTFITARSYL 354

Query: 318 EEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            + G++   +RY++  ++ A  +D     D    RVN+DL     N+ SR+   + K +D
Sbjct: 355 -DCGLNPEWMRYYIAAKLNARIEDIDLSLDDFVARVNSDLVGKFVNIASRAAGFVTKRFD 413

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G +    A   SD   L         I    + +   +AL  V++L   V+ Y DA KPW
Sbjct: 414 GRL----ADGVSDVEPLGRLLAEAGSIAAAYEAREYAKALRDVMALADLVNAYVDANKPW 469

Query: 435 ELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQ 487
           EL +      R   V  V +   R LAI L+  +PKLA  +   L V     AD      
Sbjct: 470 ELARQEGMDARLHEVCTVLINAFRLLAIYLKPVLPKLAEGVEAFLDVAPLTWADAGTVL- 528

Query: 488 SLDQRLKPGFMLHKTFDPIF 507
            L   +KP   L +  DP+ 
Sbjct: 529 -LGHTIKPYQHLMQRIDPVL 547


>gi|71906214|ref|YP_283801.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|123760643|sp|Q47IK0|SYM_DECAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71845835|gb|AAZ45331.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 696

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 233/523 (44%), Gaps = 60/523 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+  
Sbjct: 4   KILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMSGNECWYVCADDTHGTPIMLRAEKE 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + + +  + RD A    + +D++  T      D    ++ K+   G I     
Sbjct: 64  GITPEQLIARVHGEHSRDFAG-FHVGFDNYYSTHSDETRDCANDIYLKLRAAGLIETRTI 122

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------------ 161
             +Y    + +  D     E  K GA  QY        A + P    E            
Sbjct: 123 EQYYDPVKQLFLPDRFIKGECPKCGAKDQYGDNCESCGAAYAPTDLKEPYSAISGAKPEL 182

Query: 162 --EEGYFFRLSAYQ-DKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
              E YFF+LS  + +  L  Y S    +L  E  N++  ++    ++ L D  +SR   
Sbjct: 183 RTSEHYFFKLSDPRCEAFLRQYTSRDNGVLQNEAANKMQEWLGAPGENKLTDWDISRDAP 242

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLHVIG 264
            +G +IPD P    YVW+DA   Y+ +   L   +G          +K + +    H IG
Sbjct: 243 YFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCARNGLDFNEYFKPDAKTELY----HFIG 298

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           KDIL FHA++WPA L  A    P K+F+HGF+   G K+SKS G  I   E   + G++ 
Sbjct: 299 KDILYFHALFWPAELAHAGFRTPTKIFAHGFLTVDGAKMSKSRGTFIT-AESFLKTGLNP 357

Query: 325 --LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
             LRY+   ++ A  +D     D    RVN+DL     N+ SRS   I K ++G +    
Sbjct: 358 EWLRYYYAAKLSATMEDIDLSLDDFVARVNSDLVGKYVNIASRSAGFITKRFNGQLAPAT 417

Query: 382 AFTESDESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           A   + + I    SR+  L E RE        +A+ ++++L    ++Y D+ KPWEL K 
Sbjct: 418 AELPAIKGIQEAASRIAELYEARE------FGKAMREIMALTDAANQYVDSVKPWELAKQ 471

Query: 440 NPDRASTVLYVT--VEVIRQLAILLQAFVPKLANKIFDILFVA 480
                      T  + + R L +LL+  +P +A K+   L +A
Sbjct: 472 EGKEVELHAACTNALNLFRLLTVLLKPILPIVAEKVEKFLNIA 514


>gi|187663990|sp|A7MZT3|SYM_VIBHB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 686

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 224/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160
             +    E +  D  V KG      ++ QY +   N      P + +             
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L D  +G    ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGEENKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
           +   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 AAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             V + + R L   L+  +P LA +
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAAR 501


>gi|254229863|ref|ZP_04923268.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393754|ref|YP_003285608.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937632|gb|EDN56485.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337348|gb|ACY51143.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 691

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 220/507 (43%), Gaps = 52/507 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S
Sbjct: 72  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD-----LHVIGKDILRF 270
           P +     YVW+DA   Y+   G   N  G +      ++W  D      H IGKDI+ F
Sbjct: 249 PGEKNKFFYVWLDAPIGYM---GSFKNLCGKRDDLDFDEYWKKDSSAELYHFIGKDIVYF 305

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+  
Sbjct: 306 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYA 365

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 366 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSDNFAEPELYNE 425

Query: 390 ILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445
            ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K         
Sbjct: 426 FVAAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQ 479

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  V + + R L   L+  +P LA +
Sbjct: 480 DICSVGINLFRVLMTYLKPVMPALAAR 506


>gi|327542457|gb|EGF28936.1| methionyl tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 679

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 217/512 (42%), Gaps = 55/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L ++ A+ Y N   HIGH  E +  D+  RF +L G   L+    D HG  I   A+  
Sbjct: 4   RLLVTAALPYANGPIHIGHLVEYLQTDIWVRFQKLRGNRCLYICADDTHGTAIMIRARGE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G +    +++ S    RD A    I +D +  T  + +   C  +WK + D   + +   
Sbjct: 64  GRSEIELIEETSEAHQRDFAG-FGIEFDHYGSTNSEENRTLCHQIWKSLRDADLVVERSV 122

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQH--------NPVQWM-------- 160
              Y    E +  D  V             G   N  H        +PV  +        
Sbjct: 123 EQLYDPEAETFLADRFVRGTCPKCGTPNQAGDNCNCGHTYSPTELIDPVSTLSGATPIIK 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E  F  L    D  LS + S+   + P         F+   L+D  +SR    +G +I
Sbjct: 183 EAEHLFVELEKLHD-FLSEWVSNSGALQPETANYLKGHFLADELRDWDISRPAPYFGFEI 241

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIYW 275
           PD P    YVW DA   Y+ +T    + +G   A +W +D     H IGKDI  FH ++W
Sbjct: 242 PDAPGNYWYVWFDAPIGYIASTQQWCDANGEDLADWWKSDDCEVHHFIGKDITYFHTLFW 301

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------ 329
           P  L +A   LP KV  HGF+   G+K+SKS G  +     ++ +   ALRYF       
Sbjct: 302 PGMLKTAGFSLPTKVHIHGFLNVNGKKMSKSDGTFVKAETFLKHIDPSALRYFYATKLSS 361

Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
            V ++  G D F +K      VN+DL   + NL SR      +   G+ P+       D 
Sbjct: 362 RVEDLDLGVDEFVEK------VNSDLVGKVVNLASRVGKFASR--TGLAPS----YPEDG 409

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446
            +    +    EI    ++    +A+  ++ L    + + +  KPWE+ K +P+R     
Sbjct: 410 GLFQAAAAKGDEIASAYEDGEFSKAMRLIMELADAANPFVEHAKPWEMNK-DPERQDELR 468

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V  V + + RQLA+ L   +P+LA K  D+L
Sbjct: 469 DVCTVALNLFRQLAVYLAPVLPELAKKCGDLL 500


>gi|254513805|ref|ZP_05125866.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676048|gb|EED32413.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 684

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 244/547 (44%), Gaps = 56/547 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + ++ +++A+ Y N   H+GH  E +  D+  RF R  G +  +    D HG  I  +
Sbjct: 3   QAKRRILVTSALPYANGPLHLGHILEQVQTDIWVRFQRSRGHECHYICADDAHGTAIMLS 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  ++   ++    ++   IS+D+F  T           +++++   G I +
Sbjct: 63  AERQGITPEQQIEAIHKDHLSASNDFAISFDNFYSTHSDETRHWAETIYQRLQAAGAISE 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              +  Y   ++  +  D   KG+            + +   A ++P + +         
Sbjct: 123 REITQAYD-PEKGLFLADRFIKGSCPKCKTPDQYGDNCEACGATYSPTELIDPVSALSGA 181

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                +   +FFRL  +   L  +  S     L     N++  +    L++  +SR    
Sbjct: 182 TPVERQSRHFFFRLPMFAGMLREWIASG---TLQDAVANKLREWTDGELQEWDISRDAPY 238

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G  IP +     YVW+DA   Y+ +   Y +    +   FW         H +GKDI+ 
Sbjct: 239 FGFTIPGETDKYFYVWLDAPIGYMGSFQNYCERSGVTFDDFWQPGGDTELYHFVGKDIIN 298

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L SA L  P  VF HGF+   G K+SKS G  I+    ++ +  + LRY+ 
Sbjct: 299 FHGLFWPAMLHSAALRTPTGVFVHGFLTVDGTKMSKSRGTFINARHYLDHLDAEYLRYYF 358

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++  G D    + +   +RVN+D+   + N+ SR    + K +D  + +    + S+ 
Sbjct: 359 AAKLGAGVDDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFDNQMSS----SCSEP 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L   +   + I +  +++   +A+  ++ L    ++Y D  KPW + K +P++A+ V 
Sbjct: 415 ELLQSFTEAGEGIAKAYEDREFSKAVRLIMELADRANQYIDQHKPWVMAK-DPEQAAQVQ 473

Query: 449 YVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML-HK--T 502
            V    +   R L I LQ  +PK+A +  + L      RC  +LD       +L H+  T
Sbjct: 474 AVCSTGINCFRMLMIYLQPVLPKMAERAANYL------RC--NLDWEQNSSLLLDHQLAT 525

Query: 503 FDPIFPR 509
           F+P+  R
Sbjct: 526 FEPLVQR 532


>gi|153215088|ref|ZP_01949805.1| methionyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114951|gb|EAY33771.1| methionyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 731

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVL 448
                R    I E  + +   RA+ ++ +L  + ++Y D + PW + K+   D+A   + 
Sbjct: 470 AGATDR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 525

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 526 TVGINLFRVLMTYLKPVMPALAER 549


>gi|90579105|ref|ZP_01234915.1| methionyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439938|gb|EAS65119.1| methionyl-tRNA synthetase [Vibrio angustum S14]
          Length = 681

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + + S+  +      DI + ++  T    + +    ++ ++ DKG I     S
Sbjct: 67  GMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYTQLKDKGFITSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158
             +    E +  D  V KG      A+ QY +   N                     PV 
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTKSG---ALQEETSNKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +   D +  +FW  D      H IGKDI+ FH
Sbjct: 242 EIPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLKHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVN+D+ N I NL SR+   I K +DG +       E     
Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEF 421

Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
           +    R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          
Sbjct: 422 VEAADRIGELYESRE------FGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +PKLA +
Sbjct: 476 ICTVGINLFRVLMAYLKPVMPKLAER 501


>gi|328474598|gb|EGF45403.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 688

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 72  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L N   D    ++W  D      H IGKDI+ FH++
Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   ++
Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428

Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
              R+ +  E RE        RA+ +V +L  + ++Y D + PW + K          + 
Sbjct: 429 AADRIAELFEARE------FGRAIREVTALADKANQYVDEKAPWVVAKEEGKDQELQEIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 483 SVGINLFRVLMTYLKPVMPALAAR 506


>gi|254291743|ref|ZP_04962529.1| methionyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422336|gb|EDN14297.1| methionyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 731

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 225/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G  +  ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549


>gi|163752281|ref|ZP_02159480.1| methionyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327824|gb|EDP99005.1| methionyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 694

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 232/508 (45%), Gaps = 49/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ ARF ++ G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKMRGHECHYICADDAHGTAIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 65  QLGMEPEEMIAQVNKEHQQDFAD-FNIQFDNFHSTHSVENRELASEIYLKLRDSGYIETR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      ++ QY        A +NP   +          
Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDMINPKSAISGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L  E  N++  ++K GL+   +SR    +
Sbjct: 183 PIMKDSEHFFFDLPAFEGMLKEWTRSG---ALQDEVANKLDEWLKQGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +   D +   FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSTAEVYHFIGKDIIN 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHCLFWPAMLEGAGYRKPTNVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +D      G F +  +
Sbjct: 360 AAKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFD------GKFAKVAD 413

Query: 389 SILSVCSRVLQE-IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
           + L       QE I E  + +   +A+ ++++L    + Y     PW+L K     + A 
Sbjct: 414 TTLEQVFLGKQEVIAELYEGREFGKAMREIMALADMANAYVADAAPWQLIKQEDTQEEAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V    + + R L   L+  +PKLA+ +
Sbjct: 474 QVCSNALNLFRILVTYLKPVLPKLADDV 501


>gi|91773875|ref|YP_566567.1| methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121691622|sp|Q12UQ9|SYM_METBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91712890|gb|ABE52817.1| Methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 684

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 221/493 (44%), Gaps = 40/493 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N + H+GH    + AD+  R  +  G +V F  G+D HG  I   A+   
Sbjct: 10  VLVTCGLPYANGKAHVGHLRTYVPADIFTRSLKKTGQEVTFVCGSDTHGTPIVFNAEELK 69

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---- 122
            T    +    ++F ++   + +  D F  T +  +H+    +  K+ + G +Y      
Sbjct: 70  TTPTEIIKVYHKHFDEIFKKMGVMLDAFGTTDDPTNHNRTTEIVSKLIENGYVYPKTIEI 129

Query: 123 --CYSGWYSLRD----------EAYYNDDEVYKGADGQYYNAQ---------HNPVQWME 161
             C S   SL D          +     DE  +G        +         + P ++ +
Sbjct: 130 AYCPSCDRSLPDRYVKGTCPHCKKEARGDECDQGCGKHLEPGELEHPACTTCNGPAEYKQ 189

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E +FF+LS ++D LL Y E        +  RN  + +VK  L D  ++R + DWGIK P
Sbjct: 190 QEHFFFKLSQFKDFLLEYLEG---LGGTLNARNYALGWVKQELTDWCITR-SLDWGIKFP 245

Query: 222 DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
                ++YVW+DA   Y+  T  + +  + S  KFW  D   +H IG DI+  H I+WPA
Sbjct: 246 GHEDLVVYVWVDAPIGYIAFTEEWAEANNESWEKFWKDDGSIIHFIGGDIIYHHCIFWPA 305

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
            L  A    P  V + G +  +    SKS G V+   E   + G   D LRY+L    + 
Sbjct: 306 MLKGAGYNQPDAVVASGMVKIEDRTFSKSRGYVVWVDEDYLDHGFHQDLLRYYLASYTSH 365

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  +     + +VN +L    GN + R++    K++ G IP      E  + IL   +
Sbjct: 366 TKELNFSWKVFQDKVNTELVGVFGNFLYRTLLFTHKNF-GEIPE----GEVKQDILDEIN 420

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             ++  +E M+N    +    V++L S  + YF + +PW+L K N +    ++    ++ 
Sbjct: 421 TTIENAKEAMENYEFKKYADTVMALASYGNTYFQSNEPWKLIKENKEACGEIVKNCAQIT 480

Query: 456 RQLAILLQAFVPK 468
           + L +L +  +P+
Sbjct: 481 KALCLLFEPILPE 493


>gi|270158203|ref|ZP_06186860.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289163540|ref|YP_003453678.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269990228|gb|EEZ96482.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288856713|emb|CBJ10524.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 552

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 224/506 (44%), Gaps = 51/506 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R K+ +++A+ Y N   H+GH  E I  D+  R H++ G++ +   G D HG  I  
Sbjct: 1   MKQR-KMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMSGIECISICGDDAHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
            A+  G+T +    +    + R+F+  A    I YD +  T    +      +++K+   
Sbjct: 60  KAEQMGLTPETLTAEIKLSHERDFKAFA----IDYDCYHTTHSPENQALAAAIYEKLKAN 115

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM----- 160
           G I K      Y    E +  D  V       GA  QY        A ++P   +     
Sbjct: 116 GSIIKRTIHQAYDPVKEMFLPDRYVKGTCPKCGAKDQYGDNCEVCGATYSPTDLIDAVSA 175

Query: 161 ---------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                    E E YFF L  Y++ L  +        L  E  N++  +  +GLK   +SR
Sbjct: 176 ISGAKPIEKESEHYFFDLPRYENLLKEWTRGGH---LQTEVANKLDEWFAAGLKQWDISR 232

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGK 265
               +G  IP       YVW+DA   Y+ +   Y D    S A+FW  D      H +GK
Sbjct: 233 DAPYFGFPIPGTTDKYFYVWLDAPIGYMASFKKYCDEHGVSFAEFWNKDSDTELYHFVGK 292

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FHA++WPA L ++    P  V++HGF+   G+K+SKS G  ++    IE +  + L
Sbjct: 293 DIVYFHALFWPAMLAASGHRTPTAVYTHGFLTVDGQKMSKSRGTFLEARTYIEYLHPEYL 352

Query: 326 RYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           RY+   ++  G+  D   + D    R+NADL   + N+ SR    I K +D  +      
Sbjct: 353 RYYFAAKLN-GRVDDLDLNFDDFTSRINADLVGKVVNIASRCAGFINKRFDNTLSE---- 407

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             S+  + +    V  EI E+  ++   RA+  ++    +V++Y D  KPW L K   +R
Sbjct: 408 HLSEPQLYAELIAVRSEIIESFVSRDYARAIRHIMDCADKVNQYIDTNKPWVLAKEE-ER 466

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL 469
              V  +    I    IL+    P L
Sbjct: 467 LCEVQDICTMGINLFRILITYLKPVL 492


>gi|261211930|ref|ZP_05926216.1| methionyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838538|gb|EEX65189.1| methionyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 683

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 67  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 126 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 185 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 302 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 362 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 421

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 422 AGAADRIAELFEARE------FGRAVREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 476 ICTVGINLFRVLMTYLKPVMPALAER 501


>gi|153800950|ref|ZP_01955536.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123541|gb|EAY42284.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 731

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549


>gi|269962055|ref|ZP_06176409.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833139|gb|EEZ87244.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 686

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L D  +G    ++W  D      H IGKDI+ FH++
Sbjct: 244 PGEKNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   ++
Sbjct: 304 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFVA 423

Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
              R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 424 AADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 478 SVGINLFRVLMTYLKPVMPALAAR 501


>gi|187649786|sp|Q2FU77|SYM_METHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 664

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 233/526 (44%), Gaps = 47/526 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L ++  + Y N   H+GH    + AD   RF R  G +V+F  G+D HG  I  +A+  G
Sbjct: 6   LLVTCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEEVVFICGSDNHGTPIVVSAEKEG 65

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +   ++   +F D    + + +D F  T +   H   + L  ++ D+G +Y      
Sbjct: 66  TTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHARTKHLVSRLIDRGYVYPKVIQQ 125

Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWME 161
            Y +  + +  D                DE  +G        +          N  ++ E
Sbjct: 126 AYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPGEILEPTCKICGNRAEYRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E +FF+LS +QD L  Y     E        N  + +V   L D  ++R T +WG+K P
Sbjct: 186 QEHFFFKLSGFQDWLREYLG---ELKGTDNAINYALGWVNEDLHDWCITR-TLEWGVKFP 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYWP 276
                ++YVW+DA   Y+  T       G   K +W  +     H IG+DI   H ++WP
Sbjct: 242 GHDDLVVYVWVDAPIGYIGFTEEWAEKTGRDWKTYWCGENTRVTHFIGQDITYHHCVFWP 301

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334
           A L  A    P  V + G +     K SKS G V+   E   + G+  D LRY+L+   +
Sbjct: 302 AMLHGAGYGTPYAVVASGMLKIDDHKFSKSRGYVVWTNEDYLDQGLPADYLRYYLLSYTS 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K+  +     ++R+N ++ N +GN + RS+ +  K + G+   P    E  + I    
Sbjct: 362 HTKEMNFSWQLFQERINNEVVNNLGNFIYRSLHLSQKQFGGV---PEGVVE--QEIFDRI 416

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +  + ++   ++      A+  +++L +  + Y  +++PW+L KT+    + V+   +++
Sbjct: 417 TEAIGQVTGLVEAYDFKGAVDAILALSAWGNTYIQSKEPWKLAKTDQAAMAQVMRNCLQL 476

Query: 455 IRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPG 496
            + L +L++  +P+ A  I+  L     +A  N  F +  + L PG
Sbjct: 477 AKALTLLIEPVMPERAGLIWSQLGQDSLIA--NNGFSAGLEPLSPG 520


>gi|160891633|ref|ZP_02072636.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492]
 gi|156859040|gb|EDO52471.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492]
          Length = 702

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 25  KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 84

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   +S+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 85  RAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFI 144

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 145 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 204

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  +++ L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 205 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 258

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD +  K+W       +H IG
Sbjct: 259 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFIG 315

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +    
Sbjct: 316 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGK 375

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K +D ++P  G
Sbjct: 376 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAG 435

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 436 ELNDYDRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 495

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +R +T+L+++++++  LAI  + F+P  + K+  +L
Sbjct: 496 ERVATILHISLQLVANLAIAFEPFLPFSSEKLRKML 531


>gi|270295309|ref|ZP_06201510.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274556|gb|EFA20417.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 680

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   +S+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  +++ L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD +  K+W       +H IG
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFIG 293

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +    
Sbjct: 294 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGK 353

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K +D ++P  G
Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAG 413

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 414 ELNDYDRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +R +T+L+++++++  LAI  + F+P  + K+  +L
Sbjct: 474 ERVATILHISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|297578641|ref|ZP_06940569.1| methionyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536235|gb|EFH75068.1| methionyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 731

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549


>gi|32473761|ref|NP_866755.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|68565994|sp|Q7URP3|SYM_RHOBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|32444297|emb|CAD74295.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 679

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 216/512 (42%), Gaps = 55/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L ++ A+ Y N   HIGH  E +  D+  RF +L G   L+    D HG  I   A+  
Sbjct: 4   RLLVTAALPYANGPIHIGHLVEYLQTDIWVRFQKLRGNRCLYICADDTHGTAIMIRARGE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G +    +++ S    RD A    I +D +  T  + +   C  +WK + D   + +   
Sbjct: 64  GRSEIELIEETSEAHQRDFAG-FGIEFDHYGSTNSEENRTLCHQIWKSLRDADLVVERSV 122

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQH--------NPVQWM-------- 160
              Y    E +  D  V             G   N  H        +PV  +        
Sbjct: 123 EQLYDPEAETFLADRFVRGTCPKCGTPNQAGDNCNCGHTYSPTELIDPVSTLSGATPIIK 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E  F  L    D  LS + S+   + P         F+   L+D  +SR    +G +I
Sbjct: 183 EAEHLFVELEKLHD-FLSEWVSNSGALQPETANYLKGHFLADELRDWDISRPAPYFGFEI 241

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAIYW 275
           PD P    YVW DA   Y+ +T    + +G   A +W +D     H IGKDI  FH ++W
Sbjct: 242 PDAPGNYWYVWFDAPIGYIASTQQWCDANGEDLADWWKSDDCEVHHFIGKDITYFHTLFW 301

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------ 329
           P  L +A   LP KV  HGF+   G+K+SKS G  +     ++ +   ALRYF       
Sbjct: 302 PGMLKTAGFSLPTKVHIHGFLNVNGKKMSKSDGTFVKAETFLKHIDPSALRYFYATKLSS 361

Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
            V ++  G D F +K      VN+DL   + NL SR      +   G+ P+       D 
Sbjct: 362 RVEDLDLGVDEFVEK------VNSDLVGKVVNLASRVGKFASR--TGLAPS----YPEDG 409

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446
            +    +    EI    ++    +A+  ++ L    + + +  KPWE+ K  P+R     
Sbjct: 410 GLFQAAAAKGDEIASAYEDGEFSKAMRLIMELADAANPFVEHAKPWEMNKA-PERQDELR 468

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V  V + + RQLA+ L   +P+LA K  D+L
Sbjct: 469 DVCTVALNLFRQLAVYLAPVLPELAKKCGDLL 500


>gi|325578269|ref|ZP_08148404.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160005|gb|EGC72134.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
          Length = 682

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 238/503 (47%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIYFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+  K  I     
Sbjct: 67  GITPEELIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQITAEIYNKLKAKDFIKTKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 IKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L + +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWGENSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSEYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DE++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K +        V  
Sbjct: 418 AEFTAQAEQIATYYESREYNKAIREIMTLTDKANKYIDEKAPWVIAKEDGKETELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|153835356|ref|ZP_01988023.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868127|gb|EDL67289.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 686

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWM------------- 160
             +    E +  D  V KG      ++ QY +   N      P + +             
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L D  +G    ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGEKNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
           +   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 AAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             V + + R L   L+  +P LA +
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAAR 501


>gi|121728181|ref|ZP_01681216.1| methionyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673338|ref|YP_001216504.1| methionyl-tRNA synthetase [Vibrio cholerae O395]
 gi|121629578|gb|EAX62001.1| methionyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315221|gb|ABQ19760.1| methionyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012852|gb|ACP09062.1| methionyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 731

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 225/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G  +  ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 524 ICTVGINLFRILMTYLKPVMPALAER 549


>gi|157961740|ref|YP_001501774.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083265|sp|A8H3V2|SYM_SHEPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157846740|gb|ABV87239.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 679

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 240/542 (44%), Gaps = 63/542 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+T +  + Q  +   +D AD  +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 65  QLGMTPEDMIAQVQKEHEKDFAD-FNIQFDNFHSTHSDENRELASEIYIKLRDAGYIKTK 123

Query: 123 CYSGWYS------------------LRDEAYYNDDEVYKGA--------DGQYYNAQHNP 156
             S  +                    + E  Y D+    GA        D +   +   P
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPRCKSEDQYGDNCDNCGATYSTTDLIDPKSAVSGATP 183

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V   + E +FF L +++  L  +  S     L  E  N++  + + GL+   +SR    +
Sbjct: 184 VM-KDTEHFFFDLPSFEGMLKEWINSGS---LQQEMANKLGEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L N   D +   FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDDFWSKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +    A T   E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKI-ADTSLTE 418

Query: 389 SILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRA 444
           S L+    +    E RE        +A+ +V++L    + Y     PW+L K +   + A
Sbjct: 419 SFLAKQETIANFYETRE------FGKAMREVMTLADIANAYVADSAPWQLIKDDAKQEEA 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI------------FDILFVADENRCFQSLDQR 492
             V    + + R L   L+  +PKLA  +             D+     E   F++L QR
Sbjct: 473 HQVCTNALNLFRILVTYLKPVLPKLAQDVEAFLQMELTWDNLDVDLAGHEIAKFKALMQR 532

Query: 493 LK 494
           ++
Sbjct: 533 VE 534


>gi|153824980|ref|ZP_01977647.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153828134|ref|ZP_01980801.1| methionyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|254226392|ref|ZP_04919980.1| methionyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621081|gb|EAZ49427.1| methionyl-tRNA synthetase [Vibrio cholerae V51]
 gi|148876376|gb|EDL74511.1| methionyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149741492|gb|EDM55522.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 731

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 55  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 114

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 115 GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 173

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 174 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 232

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 233 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 289

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 290 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFH 349

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   
Sbjct: 350 SLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAA 409

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     
Sbjct: 410 KLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEF 469

Query: 391 LSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-ST 446
                R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K+   D+A   
Sbjct: 470 AGAADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +P LA +
Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAER 549


>gi|88604058|ref|YP_504236.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189520|gb|ABD42517.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 690

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 233/526 (44%), Gaps = 47/526 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L ++  + Y N   H+GH    + AD   RF R  G +V+F  G+D HG  I  +A+  G
Sbjct: 32  LLVTCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEEVVFICGSDNHGTPIVVSAEKEG 91

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +   ++   +F D    + + +D F  T +   H   + L  ++ D+G +Y      
Sbjct: 92  TTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHARTKHLVSRLIDRGYVYPKVIQQ 151

Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWME 161
            Y +  + +  D                DE  +G        +          N  ++ E
Sbjct: 152 AYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPGEILEPTCKICGNRAEYRE 211

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E +FF+LS +QD L  Y     E        N  + +V   L D  ++R T +WG+K P
Sbjct: 212 QEHFFFKLSGFQDWLREYLG---ELKGTDNAINYALGWVNEDLHDWCITR-TLEWGVKFP 267

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYWP 276
                ++YVW+DA   Y+  T       G   K +W  +     H IG+DI   H ++WP
Sbjct: 268 GHDDLVVYVWVDAPIGYIGFTEEWAEKTGRDWKTYWCGENTRVTHFIGQDITYHHCVFWP 327

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334
           A L  A    P  V + G +     K SKS G V+   E   + G+  D LRY+L+   +
Sbjct: 328 AMLHGAGYGTPYAVVASGMLKIDDHKFSKSRGYVVWTNEDYLDQGLPADYLRYYLLSYTS 387

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K+  +     ++R+N ++ N +GN + RS+ +  K + G+   P    E  + I    
Sbjct: 388 HTKEMNFSWQLFQERINNEVVNNLGNFIYRSLHLSQKQFGGV---PEGVVE--QEIFDRI 442

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +  + ++   ++      A+  +++L +  + Y  +++PW+L KT+    + V+   +++
Sbjct: 443 TEAIGQVTGLVEAYDFKGAVDAILALSAWGNTYIQSKEPWKLAKTDQAAMAQVMRNCLQL 502

Query: 455 IRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPG 496
            + L +L++  +P+ A  I+  L     +A  N  F +  + L PG
Sbjct: 503 AKALTLLIEPVMPERAGLIWSQLGQDSLIA--NNGFSAGLEPLSPG 546


>gi|161511054|ref|NP_798448.2| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879483|ref|ZP_05891838.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898218|ref|ZP_05906714.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260903217|ref|ZP_05911612.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|61252102|sp|Q87N07|SYM_VIBPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|308088382|gb|EFO38077.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093540|gb|EFO43235.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106544|gb|EFO44084.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 688

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 72  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L N   D    ++W  D      H IGKDI+ FH++
Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   ++
Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428

Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
              R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 429 AADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 483 SVGINLFRVLMTYLKPVMPALAAR 506


>gi|301056527|ref|YP_003794738.1| methionine--tRNA ligase [Bacillus anthracis CI]
 gi|300378696|gb|ADK07600.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 544

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 245/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEEIGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|283783692|ref|YP_003374446.1| methionine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441551|gb|ADB14017.1| methionine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 625

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 245/530 (46%), Gaps = 70/530 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 6   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 65

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV+ +   ++ +R   +D+ D L +SYD F RTT   H    + ++++    G IYKG  
Sbjct: 66  GVSAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQ 124

Query: 125 ------SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------Q 158
                 S   +L D  Y        GADG   +               NPV        +
Sbjct: 125 KVAISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPR 183

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFD 215
           + E E YF  L A  +  +++  S   +      R  VI+F   + + +K  +++R   D
Sbjct: 184 FEETEHYFLDLPALAEANVNWLHSREGW------RTNVINFSLGLFNEVKPRAITRD-ID 236

Query: 216 WGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVI 263
           WGI +P     D+P   +YVW DA+  YL+ +       G    +  W  D      + +
Sbjct: 237 WGIPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPEAWRDWWCDPKSPGYYFM 296

Query: 264 GKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G 
Sbjct: 297 GKDNITFHSQIWPSEMLAYNGAGSKGGEAGIYGPLNMPEQVVASEFMTMEGKKFSSSRGI 356

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I
Sbjct: 357 VIYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLI 416

Query: 370 LKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            K++ G+IP     + T  D ++L   S     +   ++      AL + + +V+++++Y
Sbjct: 417 NKNF-GVIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKY 475

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 476 ISATEPWKIKD-DEARLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEAL 524


>gi|297538808|ref|YP_003674577.1| methionyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258155|gb|ADI30000.1| methionyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 686

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 241/529 (45%), Gaps = 51/529 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+  
Sbjct: 9   KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEKE 68

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  +D  +  +  D ++ L + +D++  T    + +  + +++K+   G I     
Sbjct: 69  GITPEALIDGVHKEHTADFSEFL-VEFDNYYSTNAPENKELSQSIYRKLKANGKIATKII 127

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
             +Y      +   D   KG      A  QY        A +NP + +            
Sbjct: 128 EQFYDPVKNMFL-PDRFIKGECPKCHAKDQYGDSCEVCGATYNPTELINAYSAVSGAAPI 186

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+LS  +  L  +  S     L  E  N++  + ++GL D  +SR    +G 
Sbjct: 187 RKETEHYFFKLSECEQFLKDWTRSG---TLQGEAANKMGEWFENGLNDWDISRDAPYFGF 243

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   Y+ +   L    G    ++W  D      H IGKDIL FHA
Sbjct: 244 EIPDAPGKYFYVWLDAPIGYMASFKNLCQAKGLDFDEYWSKDSKTELYHFIGKDILYFHA 303

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331
           ++WPA L  +    P ++F+HGF+   GEK+SKS G  I     +E +   + LRY+   
Sbjct: 304 LFWPATLEFSGHRKPTQIFAHGFLTVNGEKMSKSRGTFITARSYLEHIKNPEYLRYYYAA 363

Query: 332 EI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDES 389
           +I +  +D     D    RVN+DL     N+ SR+   I K +DG + PT      ++  
Sbjct: 364 KINSTMEDIDLSLDDFVARVNSDLVGKYINIASRTAGFINKRFDGKLNPT------ANNI 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STV 447
           +++        I E+ + +   +AL +++ L    + +   + PW + K+   D A   V
Sbjct: 418 VVAEIKASAHAIAESYEAREYGKALREIMRLADIANGFVADKAPWVIAKQEGQDEALQQV 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
               +E+ R L + L+  +PKLA +I   L +  E   +Q++   L P 
Sbjct: 478 CSDALEMFRLLTLYLKPVLPKLAYEIERFLNI--EPLIWQAVGASLLPA 524


>gi|229032677|ref|ZP_04188640.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228728676|gb|EEL79689.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 544

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 239/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E+  +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVETAKQ--TGAWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEEAGKDDQEFWGKEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G +P  G+    D  +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPK-GSI---DVEL 413

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + I E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 414 KGKVEGLYKNIGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKQREDDPVACEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +  +N
Sbjct: 474 CVYLIVNFANLLEPFLPFSSERVRNTLSIVKQN 506


>gi|313675114|ref|YP_004053110.1| methionyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941812|gb|ADR21002.1| methionyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 688

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 234/515 (45%), Gaps = 48/515 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+  R+ RL   +V F  G+DEHG  I   A+  G+
Sbjct: 10  ITAALPYANGPLHIGHIAGAYLPADIFVRYLRLRKKEVAFMCGSDEHGAAITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T    +D+     +   +   I++D + RT+E  HH+  +  + K+ +KG+  +     +
Sbjct: 70  TPNAIIDKYHELNKKTFEKFGIAFDMYHRTSEPSHHELSQEFFTKLYEKGEFEERESEQY 129

Query: 128 YSLRDEAY-------YNDDEVYKGADGQYYNAQH-------------NPVQWMEEEG--- 164
           Y   DE +       Y   +  K  +   Y  Q              NPV  +  +    
Sbjct: 130 Y---DEEFNQFLADRYITGKCPKCGNESAYGDQCEKCGSSLNPTDLINPVSTLSGKTPIL 186

Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                +F  L  YQ+ +  +     +         +  S++  GL+  +++R   DWG+ 
Sbjct: 187 KKTTHWFLPLDKYQEWMEKWLVEGKKGKWKSNVYGQCSSWLNQGLQARAMTR-DLDWGVD 245

Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-----PAD----LHVIGKDI 267
           +P        +YVW+DA   Y++ T       G+   KFW     P D    +H IGKD 
Sbjct: 246 VPLKGAEGKKLYVWLDAPIGYISATKQWAKDTGNDWEKFWKKQENPEDDSTLIHFIGKDN 305

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P  L +  +  LP+ V ++ F+  +G K+S S    +   E +E      D 
Sbjct: 306 IVFHCIIFPVILHAHGDYILPENVPANEFLNLEGHKLSTSRNWAVWLHEYLESFPGKEDV 365

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L   +   KD  +     + R N++L    GN ++R+V +  K YDG +P  G + 
Sbjct: 366 LRYALAATLPETKDSEFTWKDFQTRNNSELVAIFGNFINRAVVLTHKYYDGKVPERGEWF 425

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D+ IL+        I E + N     ALA ++      ++Y    +PW+L+K NP+R 
Sbjct: 426 DYDQEILNELKGYPDLIEEKIVNYKFREALAAMMEFARLGNKYLAETEPWKLQKENPERV 485

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            T++ + +++   L+I+ + F+P  A K+  +L +
Sbjct: 486 KTIMNLALQIAANLSIVCEPFLPFTATKLRKMLNI 520


>gi|16273191|ref|NP_439429.1| methionyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581399|ref|ZP_05849213.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174532|sp|P43828|SYM_HAEIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1574731|gb|AAC22924.1| methionyl-tRNA synthetase (metG) [Haemophilus influenzae Rd KW20]
 gi|260091941|gb|EEW75890.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 682

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I     
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYN------AQHNPVQWM------------ 160
           S  +      +  D  V KG      A+ QY +      + ++P+  +            
Sbjct: 126 SQLFDPEKNMFLPDRFV-KGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPI 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  L  +  S     L  E  N++  + +S L+   +SR    +G 
Sbjct: 185 VKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESDLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHA 272
           +IP       YVW+DA   Y+ +   L N +G    +FW     A+L H IGKDI+ FH+
Sbjct: 242 EIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 302 LFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    D+S+ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDKSLF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +  +   ++I    +++  ++ + ++++L  + ++Y D + PW + K     A    V  
Sbjct: 418 AEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           + +E+ R L   L+  +PKLA +
Sbjct: 478 MGIELFRVLMSYLKPVLPKLAER 500


>gi|225012064|ref|ZP_03702501.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003619|gb|EEG41592.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 684

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 244/531 (45%), Gaps = 65/531 (12%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   HIGH A   + AD+  R+ R  G DVLF  G+DEHG  I+  A+  G 
Sbjct: 7   VTAALPYTNGPIHIGHLAGVYVPADIYTRYLRCQGKDVLFICGSDEHGVAISLKAKKEGK 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK----------- 116
           T +  +D+     RD  +   I++D++ RT+ + H++T + ++K +  K           
Sbjct: 67  TPQEIIDKYDLIIRDSFEKFGIAFDNYSRTSREIHYETAQEIFKNLEAKSVFELKESEQL 126

Query: 117 ---------------------------GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
                                      GD  + C S   SL      +      G     
Sbjct: 127 FDEEAQQFLADRFVTGTCPICSHPEAYGDQCESCGS---SLNATELIDPKSTISGGKPAL 183

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLS 208
            + +H          ++  L+ Y+D + ++  E H +   P     +V S+V +GL+  +
Sbjct: 184 KSTKH----------WYLPLNRYEDFIKNWILEGHKKDWKP-NVYGQVKSWVDNGLQPRA 232

Query: 209 LSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261
           ++R   DWGI +P       ++YVW DA   Y+++T      +G+  + +  D     +H
Sbjct: 233 VTRD-LDWGIPVPVIGGEGKVLYVWFDAPIGYISSTKEWAQQNGTDWEPYWKDKETQLVH 291

Query: 262 VIGKDILRFHAIYWPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            IGKD + FH I +P  L  + +  LP+ V ++ F+  +G+KIS S    +   E +EE 
Sbjct: 292 FIGKDNIVFHCIIFPIILHANGHYILPENVPANEFLNLEGQKISTSKNWAVWLHEYLEEF 351

Query: 321 --GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY L       KD  +  D  + R N +L    GN ++R V +  K YDG +P
Sbjct: 352 PDQQDVLRYVLTANAPETKDNDFTWDEFQARNNNELVAIFGNFINRVVVLTHKYYDGKVP 411

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                T+ D+++L   + + Q+I + ++      A   ++ L    ++Y    +PW+L K
Sbjct: 412 KSENLTDFDKAVLEEMALLPQKIGQAIEQYRFREASQTLMQLARLGNKYLADSEPWKLIK 471

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           T+P R +T+++  +++   L+IL +  +P  A K+  +L +  +   + S+
Sbjct: 472 TDPQRVTTIMHTALQIAAGLSILCEPILPFTAEKLTKMLCLNSKKLSWDSV 522


>gi|296438335|gb|ADH20488.1| methionyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 550

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + NP+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIIPETALKILEMI 506


>gi|110598424|ref|ZP_01386696.1| methionyl-tRNA synthetase:methionyl-tRNA synthetase, beta subunit
           [Chlorobium ferrooxidans DSM 13031]
 gi|110339958|gb|EAT58461.1| methionyl-tRNA synthetase:methionyl-tRNA synthetase, beta subunit
           [Chlorobium ferrooxidans DSM 13031]
          Length = 702

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 241/525 (45%), Gaps = 55/525 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G D+L   G+DEHG  I 
Sbjct: 1   MSHFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLKGEDILHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+  R   D      IS+D + RT+   HH T +  + +I  KG  
Sbjct: 61  ITAEREGISPQDVVDRYHRMNLDAFRKCAISFDYYGRTSSATHHATAQEFFTEIEHKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
            K     ++  + + + +D  V             G   +      +P++ +  +     
Sbjct: 121 NKKTEKLFFDRKADRFLSDRYVTGTCPICNNPEANGDQCEQCGTHLSPLELINPKSKLSD 180

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLS 210
                     ++F L  +Q +L +Y  SH +     E R+ V+++    +K GL D +++
Sbjct: 181 ETPELRDTMHWYFPLGRFQPQLEAYVNSHED-----EWRSNVVNYSRTWLKQGLNDRAIT 235

Query: 211 RKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAK---FW--PAD-- 259
           R   +WGIK+P D       ++YVW DA+  Y++ T       GS  +   +W  P    
Sbjct: 236 RD-LNWGIKVPLDSAEAEGKVLYVWFDAVLGYISFTREWAQEQGSPDRWKEYWQDPESRL 294

Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           +H IGKD + FH + +PA L++ N         L   V +  F+  +G K SKS    + 
Sbjct: 295 VHFIGKDNVVFHTLMFPAILMAWNEGRMEGCYNLADNVPASEFMNFEGRKFSKSRNYAVY 354

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             E +E+   D LRY +       KD  +     + R N +LA+ +GN + RS+      
Sbjct: 355 LGEFLEKFPADTLRYSIAMNYPENKDTDFSWLDFQNRTNGELADTLGNFIKRSIDFTNAR 414

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +DG +P    F E + +I      +L ++    +      AL+  + +    +R+    +
Sbjct: 415 FDGEVPYACTFDEWN-TIGIDWQELLSQLDLAFEQFHFRDALSLGMEMARAANRFLTEAE 473

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW++ K++ + A+  + +++ +   LA+ L   +P  +N+I+ +L
Sbjct: 474 PWKVIKSDREEAAKTMALSLNLCHALAVALYPVIPGTSNRIYAML 518


>gi|315644563|ref|ZP_07897695.1| methionyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280070|gb|EFU43367.1| methionyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 546

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 239/543 (44%), Gaps = 61/543 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   G
Sbjct: 4   IFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGEQVLYVSGSDCHGTPVAVQAIQEG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT +   D+    F    + L  SYD + RT ++ HH   + L+ K+ D G +Y+     
Sbjct: 64  VTPRDIADRYHGEFAKCFEQLGFSYDLYTRTDQEFHHGVVQELFLKLLDNGYLYRKTIQQ 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH------------------------NPVQWMEE 162
            Y   D  +  D  V          A+                         NP      
Sbjct: 124 TYCETDRRFLPDRYVEGDCPVCGSRARGDQCDVCSTLLDPSDLSNRACKICGNPPVERPT 183

Query: 163 EGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           E Y+  LS +Q +L   L+  +   E  + + RR     +++ GL D + +R    WG+ 
Sbjct: 184 EHYYVSLSHFQAELTDDLNNAKGWRENAIQLTRR-----YLEEGLVDRAATRD-LTWGVD 237

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD------LHVIGKDIL 268
           +P    +D +  +YVWI+A++ YL+ +  +     G    FW  +       +V GKD +
Sbjct: 238 VPVPGFEDKK--IYVWIEAVSGYLSASKQWAAETGGDWESFWLKEREDITAYYVHGKDNI 295

Query: 269 RFHAIYWPAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            FH + WPA L  A  L +P ++ S  ++  +G+K S S    I   +++     D++RY
Sbjct: 296 PFHTLIWPALLKGAGGLHVPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLSRYQPDSIRY 355

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES- 386
           FL+      +D  +         N +L    GNLV+R++  + K +DG +P  G  TE  
Sbjct: 356 FLIANGPEKRDTDFSWREFIHSHNGELLGAFGNLVNRTLVFVNKSFDGKVPE-GRITEEW 414

Query: 387 ---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
               ES+      +++E R       +  AL  + S V   ++YFD +KPW   K + + 
Sbjct: 415 QRRMESLYREAGTLIEEGR-------LKEALELIFSTVRHANKYFDERKPWIQVKEDREA 467

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRLKPGFMLHK 501
               L+  V++I  L  LLQ F+P   +KI   L +  A  N C     +RL    +L +
Sbjct: 468 CGDTLFTCVQIIANLTNLLQPFIPFSCDKIRGFLSLKPAAWNWCNVPAGERLHHVELLFE 527

Query: 502 TFD 504
             D
Sbjct: 528 RID 530


>gi|269967339|ref|ZP_06181400.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828047|gb|EEZ82320.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 691

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 220/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S
Sbjct: 72  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ FH++
Sbjct: 249 PGEKNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   ++
Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKL 368

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428

Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
              R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 429 AADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 483 SVGINLFRVLMTYLKPVMPSLAAR 506


>gi|329962356|ref|ZP_08300361.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328530217|gb|EGF57098.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 680

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 246/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT + HH+T    ++K+ DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKKSFEDFGISFDVYSRTTSETHHETASDFFRKLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  +++ L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IG
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIG 293

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +    
Sbjct: 294 KDNIVFHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGK 353

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K ++G++P  G
Sbjct: 354 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFNGVVPAAG 413

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             T+ D   L     V  E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 414 ELTDYDRETLKEFEDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 473

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            R ST+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 474 ARVSTILNISLQLVANLAIAFEPFLPFSSEKLRRML 509


>gi|297620945|ref|YP_003709082.1| Methionyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376246|gb|ADI38076.1| Methionyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 674

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 232/515 (45%), Gaps = 48/515 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+K+ I++A+ Y N   H GH A   +  D  ARF RL G D L+  G+DE+G  I  +A
Sbjct: 3   RQKVLITSALPYANGPLHFGHIAGAYLPGDCYARFQRLIGSDTLYICGSDEYGVAITLSA 62

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG T K  VD      + +   L++S+D + RTT + H       +K + + G I + 
Sbjct: 63  EIAGRTPKEHVDLYHEVIKGLFQKLNLSFDHYSRTTWEGHEKPVHQYFKDLLENGYIEEK 122

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-------------------------PV 157
                YS +D+ +  D  V     G  ++                             P+
Sbjct: 123 VTDQLYSEQDKRFLADRYVVGVCPGCGFDCARGDECPQCGASYEATDLKNPRSKLTNAPL 182

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-- 215
                + +F +L  ++++L  +  S        E +  V++FVK  +K+L     T D  
Sbjct: 183 TRKATKHWFLKLDRFKERLTEWLNSK-------EWKPNVVNFVKGYIKNLRPRAITRDSE 235

Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPAD-----LHVIGKD 266
           WG+ +P  +    ++YVW DA   YL+ T    L   D  + K +  D     ++ IGKD
Sbjct: 236 WGVPVPLSNTEGKVLYVWFDAPIGYLSATMEWALKKGDPEQWKAYWCDESTTLVNFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            + FHA  +PA  +  N P  L   + ++ F L +G + SKS G  ID  +  E    D 
Sbjct: 296 NIPFHAAIFPAMTMGQNQPYKLVDHLPANEFYLLEGRQFSKSEGWYIDLDQFFERYTADQ 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +RY +        D  +     + + N DL    GNL +R +    K+  G +P      
Sbjct: 356 IRYAIAANAPETSDSEFTWKDFQYKCNGDLLGKYGNLANRIMVFSHKNVHGKVPARKNLD 415

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E D++ LS    ++ +  +  Q+  + +A   ++ L    + YFD ++PW+L K    R 
Sbjct: 416 EVDKAFLSSIDVLVDQAFQCYQSFSLRKACQVIMELAQRGNIYFDGKQPWKLAKDPEQRE 475

Query: 445 --STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              TVL   +E ++ LA++    +P+ A+K++ +L
Sbjct: 476 VLETVLSCCLECLKALALISSPILPETADKLWTML 510


>gi|254507772|ref|ZP_05119903.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549297|gb|EED26291.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 686

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161
             +    E +  D  V KG      ++ QY +   N      P + ++            
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E  +   
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYKEFA 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
               R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 DAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             V + + R L   L+  +P+LA +
Sbjct: 477 CSVGINLFRVLMTYLKPVMPELAAR 501


>gi|329923262|ref|ZP_08278747.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328941497|gb|EGG37788.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 546

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 231/511 (45%), Gaps = 51/511 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   
Sbjct: 3   NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGDHVLYVSGSDCHGTPVAVQAIQE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT     D+    F +    L  SYD + RT +  HH   + L+ K+ D G +Y+    
Sbjct: 63  GVTPGDIADRYHAEFAECFAQLGFSYDLYTRTDQAFHHGVVQELFLKLLDNGHLYRKTVL 122

Query: 126 GWYSLRDEAYYNDDEVY-------KGADGQYYNAQH-----------------NPVQWME 161
             Y   D  +  D  V          A G   +A                   NP     
Sbjct: 123 QTYCETDRRFLPDRYVEGDCPVCGSRARGDQCDACSTMLDPSDLTNRTCKMCGNPPVERP 182

Query: 162 EEGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E ++  LS +Q +L   LS+ +   +  + + RR     +++ GL+D + +R    WG+
Sbjct: 183 TEHFYVALSHFQAELADDLSHAQGWRDNAVHMTRR-----YLEEGLQDRAATRD-LTWGV 236

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWP------ADLHVIGKDI 267
            +P    +D +  +YVWI+A++ YL+ +  +     G    FW          +V GKD 
Sbjct: 237 DVPVPGFEDKK--IYVWIEAVSGYLSASKQWAAETGGDWEPFWRKGQGEVTAYYVHGKDN 294

Query: 268 LRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH + WPA L  A +L  P ++ S  ++  +G+K S S    I   +++     D++R
Sbjct: 295 IPFHTLIWPALLKGAGDLHQPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLRRYQPDSIR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+      +D  +         N +L    GNLV+R++    K +DG +P  G+ ++ 
Sbjct: 355 YFLIANGPEKRDADFSWREFIHSHNGELLGAFGNLVNRTLVFANKSFDGKVPE-GSISDE 413

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            +  L     + Q+    ++   +  AL  + S+V + ++YFD +KPW   K +     T
Sbjct: 414 WQGRLEA---LYQQAGALIEEGRLKEALELIFSVVRQANKYFDERKPWIQVKEDRAACGT 470

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LY  + ++  LA LLQ F+P   ++I D L
Sbjct: 471 TLYTCILIMANLANLLQPFIPFSCDRIRDFL 501


>gi|323498216|ref|ZP_08103218.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323316644|gb|EGA69653.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 686

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161
             +    E +  D  V KG      ++ QY +   N      P + ++            
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 185

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E      
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYNEFA 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTV 447
           +   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 AAADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             V + + R L   L+  +P+LA +
Sbjct: 477 CSVGINLFRVLMTYLKPVMPELAAR 501


>gi|149926203|ref|ZP_01914465.1| methionyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149825021|gb|EDM84233.1| methionyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 691

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 235/516 (45%), Gaps = 47/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF ++   +V +    D HG  +   AQ  
Sbjct: 4   RILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMQSNEVYYVCADDTHGTPVMLRAQAE 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++ +  + + ++ + RD A    + +D++  T    +   C  ++ ++ D G I     
Sbjct: 64  GISPEELIARVSTEHQRDFAS-FHVGFDNYYSTNAPENKAHCETIYTRLRDAGLIQTRSV 122

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM------------- 160
             +Y    E +  D     E  K GA  QY        A + P +               
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTELKNAYSTVSGAAPVR 182

Query: 161 -EEEGYFFRLS--AYQDKLLSYYESHPEFILPIERR-NEVISFVKSG-LKDLSLSRKTFD 215
              + YFF+LS    ++ L  + +S     +   R+  E +    SG L D  +SR    
Sbjct: 183 KSSDHYFFKLSDPRCENFLRQWTQSEGRLQVEASRKMQEWLGEEGSGKLADWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILR 269
           +G +IPD P    YVW+DA   Y  +   L    G    +F  AD     +H IGKDIL 
Sbjct: 243 FGFEIPDAPGKYFYVWLDAPVGYFASFQNLCERIGVDYQEFLKADTNTEMIHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FHA++WPA L  A L  P KV +HGF+   G K+SKS G  I     I++ +  + LRY+
Sbjct: 303 FHALFWPAMLQFAGLRTPTKVNAHGFLTVDGAKMSKSRGTFITAESFIQQGLNPEWLRYY 362

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ +  +D          RVN+DL     N+ SRS   ++K+++G +      +   
Sbjct: 363 FAAKLNSTMEDLDLSFSDFTARVNSDLVGKYINIASRSAGFLVKNFEGRVLD----SAMQ 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
             +L+        I  +   +   +A+ +V++   +V+ Y D +KPWEL K NPD+ +  
Sbjct: 419 HPLLADIRAQAAAIAAHYDEREYGKAIREVMACADKVNAYVDQEKPWELAK-NPDKQAEL 477

Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            T   + +E  R L + L+  +P LA    +IL VA
Sbjct: 478 QTACSICLEAFRLLTLYLKPVLPVLAGNAENILGVA 513


>gi|228988288|ref|ZP_04148383.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771460|gb|EEM19931.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 544

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 245/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E+  +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVENAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKEAKIYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKQREDDPVLCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + ++ + L +   N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN---------WEPQHTLPSRIDSVQPLF 524


>gi|183222652|ref|YP_001840648.1| methionyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912685|ref|YP_001964240.1| methionyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226710908|sp|B0SHA8|SYM_LEPBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710909|sp|B0SQX5|SYM_LEPBP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167777361|gb|ABZ95662.1| Methionine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781074|gb|ABZ99372.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 681

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 235/520 (45%), Gaps = 41/520 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E +  D+  RF +L G +  F    D HG  I  AA+ AG
Sbjct: 5   ILVTSALPYANGSIHLGHILEAVQTDIWVRFQKLIGNECYFFCADDTHGTPIMIAAKKAG 64

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            T +  +++    +++D+     + YD++  T  + +      ++  +   G I      
Sbjct: 65  KTPESMIEEVQKEHYKDLTS-FGVEYDNYYTTNSEENKKFSESIYLTLKKNGHIVARNIE 123

Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQYYNAQH---------------------NPVQW 159
             Y   D+ +  D  +       GA  QY ++                        PV  
Sbjct: 124 QSYCEHDKMFLPDRFIKGTCPKCGAKDQYGDSCEVCGTSYSPKDLKDSYCSICGTTPV-L 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E +  FF+L  +Q++L ++ E         +++  +  +  SGL++  +SR    +G  
Sbjct: 183 RESKHLFFKLQDFQNQLKNWMEEGNRLNEGAQKK--LQEWFTSGLQEWDISRDGPYFGFA 240

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
           IP++     YVW+DA   Y+ ++      +    +FW       +H IGKDIL FH ++W
Sbjct: 241 IPEEENKYFYVWLDAPIGYMASSLNHLKDERKFNEFWKEGKGEIVHFIGKDILYFHGLFW 300

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L+ +    P ++  HGF+   GEK+SKS G  I+     + + V+  R++L   +  
Sbjct: 301 PAMLMGSGYKAPSQLNVHGFLTVNGEKMSKSRGTFINASTFAKYLDVEHFRFYLACRLGS 360

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
           G +D     D    RVN+DL   + NLVSR  + IL   D M    G  +   +S++S  
Sbjct: 361 GMEDVDISFDDFVSRVNSDLIGNLVNLVSRVSTSIL---DKMDRKLGILSTEGKSLVSEL 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
                EIRE   ++   + +  +  L  +V++Y +   PW L KT+ ++A  V+  ++  
Sbjct: 418 LSKETEIREAYVSRNYSKVMRDITGLGDKVNKYVNDYAPWNLIKTDVEKAREVVTTSLNC 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            + L   L    PK+ + + D+  +   N  F +L + ++
Sbjct: 478 AKILFTYLAPVTPKIVHSLADLFQIP--NLSFLNLTETIE 515


>gi|228955300|ref|ZP_04117308.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804433|gb|EEM51044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 544

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 236/511 (46%), Gaps = 41/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D           E  +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEVIS---------------FVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLIDRAVSRD-LPIGVPIP 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFHAI 273
               +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH++
Sbjct: 242 VEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSV 299

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL   
Sbjct: 300 IWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N++L    GN V+R++  I K Y G++       E  + +  
Sbjct: 360 APENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVTKGSIEVELKDKVEG 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  RV + I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y  V
Sbjct: 420 LYKRVGEAIEQTK----FKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +I   A LL+ F+P  + ++ + L + + N
Sbjct: 476 YLIANFAHLLEPFLPFSSERVRNTLSIVNRN 506


>gi|47567080|ref|ZP_00237797.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47570323|ref|ZP_00240969.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553008|gb|EAL11413.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556398|gb|EAL14732.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 544

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 245/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++  + F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHKEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDKEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKQREDDPVLCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + ++ + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|209695662|ref|YP_002263591.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710892|sp|B6EIY5|SYM_ALISL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|208009614|emb|CAQ79910.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 686

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 217/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G D+ F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDINFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASSIYLELKKNGFITSRTIS 126

Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------------- 160
             +    E +  D            E   G +       ++P   +              
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEEQYGDNCDNCGETYSPTDLINPKSAVSGATPVMK 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L +   D    ++W  +      H IGKDI+ FH++
Sbjct: 244 PGETNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKLNSTTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 304 FWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAAKL 363

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVN+D+ N I NL SR+   I K +DG +       E     ++
Sbjct: 364 NSRIDDIDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLSDNFVAPELYNEFVA 423

Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
              R+  L E RE        RA+ ++ +L  + ++Y D + PW L K          V 
Sbjct: 424 ASDRIAELYETRE------FSRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQEVA 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P+LA +
Sbjct: 478 SVGINLFRVLMAYLKPVMPELAAR 501


>gi|313793399|gb|EFS41457.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313810333|gb|EFS48049.1| methionyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313814707|gb|EFS52421.1| methionyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313838090|gb|EFS75804.1| methionyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314914475|gb|EFS78306.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314917799|gb|EFS81630.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314957045|gb|EFT01151.1| methionyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957660|gb|EFT01763.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314972967|gb|EFT17063.1| methionyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314975484|gb|EFT19579.1| methionyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314986026|gb|EFT30118.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314988809|gb|EFT32900.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315086970|gb|EFT58946.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089895|gb|EFT61871.1| methionyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327325339|gb|EGE67144.1| methionine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327443770|gb|EGE90424.1| methionyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327449166|gb|EGE95820.1| methionyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327451348|gb|EGE98002.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|328755046|gb|EGF68662.1| methionyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328755907|gb|EGF69523.1| methionyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328761055|gb|EGF74606.1| methionine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 554

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 70/496 (14%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  VL  +G+D HG  I+  A   GVT +   ++  R        L +SYD +  T  
Sbjct: 1   MSGHRVLMVSGSDCHGTAISVKADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWY------SLRDE--------AYYNDDEVYKGA 145
             H D  + ++ ++ + G + K    G +      +L D           Y+D    +G 
Sbjct: 61  DNHADVTQEIFTRLHENGYVVKRSEMGAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGD 117

Query: 146 DGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
                  Q +P               ++ E E +F  L A  + L S+ ++  ++     
Sbjct: 118 QCDNCGRQLDPADLIDPRSKTTGAAPEFRETEHFFLDLPALAESLASWIDTRTDW----- 172

Query: 192 RRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT-- 242
            R  V+ F  + L++L     T   DWGI++P     D+P   +YVW DA+  YL+ +  
Sbjct: 173 -RPNVLKFSHNLLEELRPRAITRDLDWGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIE 231

Query: 243 --GYLDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSAN------------- 283
               +  PD  + +FW        + +GKD + FH++ WP  LL  N             
Sbjct: 232 WARRIGRPDAWR-EFWNDEDARSYYFMGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEEL 290

Query: 284 --LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             L LP ++ S  F+   G K+S S G  I   + + E G DALRYF+       +D  +
Sbjct: 291 GTLNLPTEIVSSEFLTMSGSKVSNSRGATIFVGDFLHEFGPDALRYFIAVAGPENQDTDF 350

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             +   +RVN +LAN  GNLV+RS+SM  K+    IP  G  T++D  +L   +     +
Sbjct: 351 TWEEFVRRVNFELANEWGNLVNRSISMAFKNCH-EIPAAGELTDADRELLDAAATGFDTV 409

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              + +     A+ + + +V   + Y  A++PW+LK  NP+R  TVL+V ++V+  +  +
Sbjct: 410 GGLLAHARFKAAITEAMRIVGLANAYISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTM 468

Query: 462 LQAFVPKLANKIFDIL 477
           +  F+P  A KI++ L
Sbjct: 469 MTPFMPHSAQKIYEAL 484


>gi|229153227|ref|ZP_04281406.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228630326|gb|EEK86976.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 544

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   E      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKKVVEIAKE--KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVS 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+  Y + + +     G    +FW +D    +V GKD + FH
Sbjct: 240 IPVKGYEDKK--IYVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++   L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRSTLSIVKRN 506


>gi|229187283|ref|ZP_04314428.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|228596293|gb|EEK53968.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 544

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 ++  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRNTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPTRIDSVKPLF 524


>gi|294141350|ref|YP_003557328.1| methionyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327819|dbj|BAJ02550.1| methionyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 694

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 228/506 (45%), Gaps = 45/506 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ ARF ++ G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKMRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  +  + Q ++  R      +I +D+F  T    + +    ++ K+ D G I    
Sbjct: 65  QLGIEPEEMIAQVNKEHRQDFTDFNIQFDNFHSTHSVENRELASEIYLKLRDAGYIETRT 124

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM----------- 160
            S  +   +++ +  D   KG      ++ QY        A +NP   +           
Sbjct: 125 ISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDMINPKSAVSGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L A++  L  +  S     L  E  N++  + + GLK   +SR    +G
Sbjct: 184 IMKDSEHFFFDLPAFEGMLKEWTRSGA---LQDEVANKLNEWFEQGLKQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +   D +   FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSTAEIYHFIGKDIINF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGYRKPTHVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVN+DL   + NL SR+   I K +DG +      T   E 
Sbjct: 361 AKLSHRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKVADTTL--EQ 418

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           +      V+ E+ E  +     +A+ ++++L    + Y     PW+L K     + A  V
Sbjct: 419 VFLSKQEVIAELYEGRE---FGKAMREIMALADLANAYVADAAPWQLIKQEDKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
               + + R L   L+  +PKLA+ +
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLADDV 501


>gi|148361194|ref|YP_001252401.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|187647732|sp|A5II55|SYM_LEGPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148282967|gb|ABQ57055.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 670

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 240/551 (43%), Gaps = 61/551 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQW---------- 159
           K     +Y    + +  D  V             G + +   A ++P             
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
               ME E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +SR   
Sbjct: 181 SPVEMESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+
Sbjct: 237 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+
Sbjct: 297 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 356

Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
              ++  G+  D   + D    RVNADL   + N+ SR    I K +D  +        S
Sbjct: 357 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRL--------S 407

Query: 387 DESILSVCSRVLQEIRENMQNQLIH----RALAQVISLVSEVDRYFDAQKPWELKK--TN 440
            E I       L   RE + +  +     RA+ Q++    +V++Y DA KPW L K  + 
Sbjct: 408 SELINQKLYNDLLSAREFVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESK 467

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            +    +  + + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H
Sbjct: 468 LNEVHAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNH 521

Query: 501 K--TFDPIFPR 509
           +  TF P+  R
Sbjct: 522 RINTFKPLMVR 532


>gi|313828253|gb|EFS65967.1| methionyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 554

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 70/496 (14%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  VL  +G+D HG  I+  A   GVT +   ++  R        L +SYD +  T  
Sbjct: 1   MSGHRVLMVSGSDCHGTAISVKADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWY------SLRDE--------AYYNDDEVYKGA 145
             H D  + ++ ++ + G + K    G +      +L D           Y+D    +G 
Sbjct: 61  DNHADVTQEIFTRLHENGYVVKRSEMGAFEPSTGRTLPDRYIEGTCPVCGYDD---ARGD 117

Query: 146 DGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
                  Q +P               ++ E E +F  L A  + L S+ ++  ++     
Sbjct: 118 QCDNCGRQLDPADLIDPRSKTTGAAPEFRETEHFFLDLPALAESLASWIDTRTDW----- 172

Query: 192 RRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT-- 242
            R  V+ F  + L++L     T   DWGI++P     D+P   +YVW DA+  YL+ +  
Sbjct: 173 -RPNVLKFSHNLLEELRPRAITRDLDWGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIE 231

Query: 243 --GYLDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSAN------------- 283
               +  PD  + +FW        + +GKD + FH++ WP  LL  N             
Sbjct: 232 WARRIGRPDAWR-EFWNDEDARSYYFMGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEEL 290

Query: 284 --LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             L LP ++ S  F+   G K+S S G  I   + + E G DALRYF+       +D  +
Sbjct: 291 GTLNLPTEIVSSEFLTMSGSKVSNSRGATIFVGDFLHEFGPDALRYFIAVAGPENQDTDF 350

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             +   +RVN +LAN  GNLV+RS+SM  K+    IP  G  T++D  +L   +     +
Sbjct: 351 TWEEFVRRVNFELANEWGNLVNRSISMAFKNCH-EIPAAGELTDADRELLDAAATGFDTV 409

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              + +     A+ + + +V   + Y  A++PW+LK  NP+R  TVL+V ++V+  +  +
Sbjct: 410 GGLLAHARFKAAITEAMRIVGLANAYISAEEPWKLKD-NPERRDTVLHVALQVVSDVNTM 468

Query: 462 LQAFVPKLANKIFDIL 477
           +  F+P  A KI++ L
Sbjct: 469 MTPFMPHSAQKIYEAL 484


>gi|269102243|ref|ZP_06154940.1| methionyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162141|gb|EEZ40637.1| methionyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 682

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 223/505 (44%), Gaps = 48/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + + S+  +      DI + ++  T    + +    ++ ++  +G I     S
Sbjct: 67  GMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYNQLKQQGYITSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYK-----GADGQYYNAQHN---------------------PVQW 159
             +    E +  D  V       GA+ QY +   N                     PV  
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCGAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM- 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTKSG---ALQDETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +   D    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWNKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLQHLDPECLRYYYAAK 362

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVN+D+ N I NL SR+   I K +DG +    A  E     +
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLAERCAEPELYAEFV 422

Query: 392 SVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTV 447
           +   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 423 AAADRIGALYESRE------YGRAIREITALADKANQYVDEKAPWVVAKEEGKDLELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANK 472
             + + + R L   L+  +PKLA +
Sbjct: 477 CSMGINLFRVLMAYLKPVMPKLAER 501


>gi|90407939|ref|ZP_01216113.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310953|gb|EAS39064.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 680

 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 231/512 (45%), Gaps = 52/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  RF RL G +V F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHVQADIWVRFQRLRGNNVSFICADDAHGTPIMLKANAM 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + +  + + +D  D  DIS+D++  T  + +      ++  +   G I     
Sbjct: 67  GITPEQMISEIKALHIKDFND-FDISFDNYHSTHSEENKTLSTHIYNTLHKNGFIKTKTI 125

Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160
              +    E +  D            E   G +     A ++P + +             
Sbjct: 126 EQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDSCGATYSPTEMINPKSAVSGATPIM 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L  ++D L ++  S     L IE  N+V  + + GLK   ++R    +G +
Sbjct: 186 KETEHFFFDLPQFEDMLKTWTRSGA---LQIEMANKVAEWFEFGLKQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP+ P    YVW+DA   Y+ +   L +   D    ++W  +      H IGKDI+ FH+
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDRRDDLDFDEYWNKNSSTELYHFIGKDIVNFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  V  HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 303 LFWPAVLEGSGFRKPTAVHVHGYVTVNGAKMSKSKGTFIKASTYLEHLDPECLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESD 387
           +     D   + D   +RVN+D+ N + NL SR+   I K Y+G     I  P  + E  
Sbjct: 363 LTSKIDDLDLNLDDFMQRVNSDVVNKLVNLASRTAGFIAKKYNGELSVKIAEPALYQEFI 422

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPD-RAS 445
           ++  S+ S  L E RE        RA+ ++++L  + ++Y D + PW L K+ + D    
Sbjct: 423 DAGESIAS--LFEKRE------FARAIREIMALADKANKYIDEKAPWALAKEADKDIEVQ 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  + + + R L   L+  +PKL  +  + L
Sbjct: 475 EICSMGINLFRVLMTYLKPVMPKLTARSEEFL 506


>gi|189460088|ref|ZP_03008873.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136]
 gi|189433249|gb|EDV02234.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136]
          Length = 680

 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 243/512 (47%), Gaps = 41/512 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     RD      IS+D + RT+ K HHDT    ++K+ DK +  
Sbjct: 63  RAKKEGVTPQDIVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKNEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160
           +     +Y      +  D  +        A+G Y        +  +P + +         
Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 QPVMKETKHWYLPLDKHESWLRQWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
           DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IGKD +
Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLIHFIGKDNI 297

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +++     D L
Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G   +
Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTNKYFDGKVPACGELND 417

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R +
Sbjct: 418 YDRDTLKEFADVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMNRVA 477

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 478 TILNISLQLVANLAIAFEPFLPFSSEKLRHML 509


>gi|255506604|ref|ZP_05382243.1| methionyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 550

 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + NP+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|329765323|ref|ZP_08256903.1| methionyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138229|gb|EGG42485.1| methionyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 551

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 241/505 (47%), Gaps = 41/505 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N + H+GH A   + ADV  RF +L G++  +   +D+ G  I   ++ 
Sbjct: 4   KAIITSALPYANGEIHLGHVASTYLPADVTTRFLKLKGVEAYYFCASDDFGTPILIQSEK 63

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G T   +V   N R++ D      I +D F +T+   +    + ++KK+++ G IY+  
Sbjct: 64  EGKTPSEYVAHWNKRDYDDFT-AFGIDFDFFYKTSSSENIAFVQDVFKKLNNAGHIYEKE 122

Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEE---------------- 162
              +Y   D+ +  D  V     Y  A  QY +   +  +  EE                
Sbjct: 123 IIQFYCKNDQKFLPDRYVKGVCPYCNASDQYSDLCESCGRVPEEISDPKCSICGQTPTKE 182

Query: 163 --EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +FF+L  + D L  + + +    L  + +  V +++KSGL D  ++R    WG+ +
Sbjct: 183 KTTHFFFKLKNFGDALYKWLDENEN--LQKDVKKYVQNWIKSGLIDWDITRD-ISWGVPV 239

Query: 221 PDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW-PADL-HVIGKDILRFHAIYW 275
           P D     + Y W D    Y++T   +LDN   +  +FW  AD+ H IGKDI+  H ++ 
Sbjct: 240 PVDNAKDKVFYGWFDNHLAYISTALKFLDNKGINGKEFWNSADIYHFIGKDIVYHHFLFL 299

Query: 276 PAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA  L  N    LP  + + G +  + +KISKS    I   + +E    D LRY+L+   
Sbjct: 300 PAMRLGINSEYKLPDFIPTRGHLTLQSKKISKSRNWYIGLKQFLEYYPADYLRYYLIAIN 359

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D   +D D    R+N++L   +GN V+R++    K +DG+IP    + + D    +
Sbjct: 360 PYSQDDLNFDWDEFTNRINSELIGNLGNFVNRALGFTKKAFDGIIPETEPYDKKDIEAET 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +  E+   M+   + RAL +++   S  ++YF  ++PW   K  P   + V +++V
Sbjct: 420 KIKNLAGELNLLMEQNHLDRALKKIMEFSSYFNQYFQHKEPW---KKGPGTTNCV-FLSV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
              R +AI +  F+P+ + KI++ L
Sbjct: 476 NAARSMAIAIFPFIPESSQKIWEQL 500


>gi|289525077|emb|CBJ14547.1| methionyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434617|gb|ADH16795.1| methionyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 550

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNAYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + NP+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|167624305|ref|YP_001674599.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083264|sp|B0TJ05|SYM_SHEHH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167354327|gb|ABZ76940.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 679

 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 239/541 (44%), Gaps = 61/541 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q  +   +D AD  +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 65  QMGIAPEEMIAQVQKEHEKDFAD-FNIQFDNFHSTHSDENRELASQVYIKLRDAGYIKTK 123

Query: 123 CYSGWYS------------------LRDEAYYNDDEVYKGA--------DGQYYNAQHNP 156
             S  +                    + E  Y D+    GA        D +   +   P
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPRCKSEDQYGDNCDNCGATYSTTDLIDPRSAVSGATP 183

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V   + E +FF L A++  L  +  S     L  E  N++  + + GL+   +SR    +
Sbjct: 184 VM-KDSEHFFFDLPAFEGMLKEWINSGS---LQQEMANKLGEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L N   D +  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEFWSKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K + G +       +  +
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFGGKL------AKIAD 413

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           + L+      QEI  N  + +   +A+ ++++L    + Y     PW+L K     + A 
Sbjct: 414 TSLTTSFLAKQEIIANFYETREYGKAMREIMALADIANAYVADSAPWQLIKEEDKQEEAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI------------FDILFVADENRCFQSLDQRL 493
            V    + + R L   L+  +PKLA  +             DI     E   F++L QR+
Sbjct: 474 QVCSNALNLFRILVTYLKPVLPKLAQDVEAFLQMELTWDNLDIDLAGHEIAKFKALMQRV 533

Query: 494 K 494
           +
Sbjct: 534 E 534


>gi|320159818|ref|YP_004173042.1| methionyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319993671|dbj|BAJ62442.1| methionyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 598

 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 223/516 (43%), Gaps = 54/516 (10%)

Query: 9   ISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I+ A  Y NA+ H+G+   AY  + AD++AR+HRL G  VL  +GTD HG  +   A   
Sbjct: 7   IAVAWPYANAEIHVGNITGAY--LPADIVARYHRLKGNRVLMVSGTDSHGTPVTLRADAE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   +    +  ++F D+     ++YD F  T  + H    + ++  +   G +Y     
Sbjct: 65  GKPVEEVYKRFHQSFLDLFQKAGLTYDLFTTTHTENHFKVAQSVFLALLKNGYLYTEVRP 124

Query: 126 GWYSLRDEAY----YNDDEVYKGADGQYYNAQH-------------NP--------VQWM 160
            WYS     +    Y +   Y   D    + Q              NP         +  
Sbjct: 125 QWYSPSLRRFLPDRYIEGTCYICGDEHARSDQCDKCGNVLEPEKLINPRSKVDGSTPELR 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E   Y+  LS  + ++  +      +         +      GLK   ++R   DWGI +
Sbjct: 185 ETVHYYLDLSKLEPEVARFLRERQHYWRETVCNQTLGQIESEGLKSRPITRD-LDWGIPV 243

Query: 221 PDD--PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW----PADLHVIGKDILRFH 271
           P +      +YVW +A+  YL+       L     +   +W       ++ IGKD + FH
Sbjct: 244 PVEGWEGKCLYVWFEAVIGYLSAPIEWARLHGLGDAWKDWWVNPESRTIYFIGKDNIFFH 303

Query: 272 AIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           A +WPA LL                 L LP  V ++ F+  +G+KIS S    +   + +
Sbjct: 304 AAWWPAQLLGMGETFMEIFAGEKGQKLVLPYDVPANQFMNLEGDKISGSRNWAVWGHDFL 363

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                D LRY+L   +   +D  +D +   KR N +L    GNL +R +S  +K ++G +
Sbjct: 364 SRYDPDPLRYYLTVNMPEMRDTDWDWEDFYKRNNDELVATWGNLANRVLSFAVKHFEGKV 423

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P PGA TE DE IL       + +   ++   +  AL   ++L +EV+RY D   PW+  
Sbjct: 424 PEPGALTELDEEILRKVESGFESVGAELEAVHLRSALGSAMALATEVNRYLDQTAPWKEI 483

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+   A+  +Y  +  I  L++LL  F+P  + K+
Sbjct: 484 KTDRQAAARAIYTALRCIDNLSVLLSPFLPFSSEKL 519


>gi|90417029|ref|ZP_01224958.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331376|gb|EAS46620.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 673

 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 233/505 (46%), Gaps = 45/505 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + ++ ++ A+ Y NA  H+GH  E    DV  RF R+ G +  + +  D HG  I  
Sbjct: 1   MSSKRQILVTNALPYANAALHLGHVLEYTQTDVWVRFQRMRGHECYYLSADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A   G++ +  + D  + +  D  D L IS D++  T  + + +   +++ +++  G I
Sbjct: 61  KADEKGISAEQHIADMRAIHEADFKDFL-ISVDNYHTTHSEENREFSELIYNRLNANGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
            K   +  +      +  D  + KG      A+ QY        A ++P+  +       
Sbjct: 120 AKREITQAFDPEKNLFLADRYI-KGTCPKCKAEDQYGDNCEACGATYSPIDLINPVSAIS 178

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E   YFF+L  +   L  +  S     +  E  N++  ++ SGL++  +SR  
Sbjct: 179 GATPIEKESTHYFFKLPEFTQFLQDWTRSGA---VQDEVANKLGEWLDSGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267
             +G +IPD P    YVW+DA   Y+ +   L + +G     +W AD      H IGKDI
Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDREGMDFDHYWKADSTTELYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L SA    P K+  HGF+   G+K+SKS G  I+    ++ +  D LRY
Sbjct: 296 VNFHALFWPAMLSSAEFRTPTKICVHGFVTVNGKKMSKSRGTFINARCYLDHLDPDYLRY 355

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   + +  +++VN+DL   + N+ SR    I    DG++         
Sbjct: 356 YYASKLSGSVEDIDLNLEDFQQKVNSDLVGKVVNIASRCAKFIANGNDGVLSN----NID 411

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           +  + +  S   + I ++ +N+   +A+ ++++     + Y  A++PW+L K      + 
Sbjct: 412 NPELWAQVSGAAETIAQHYENRDFSKAIREIMAQADAANEYIAAKEPWKLNKQEGMQQQV 471

Query: 445 STVLYVTVEVIRQLAILLQAFVPKL 469
             +    + + R L   L+  VP +
Sbjct: 472 QDICSQGINMFRVLMTYLKPVVPAM 496


>gi|260779289|ref|ZP_05888181.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605453|gb|EEX31748.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 712

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 222/503 (44%), Gaps = 44/503 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 33  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 93  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASRIYLELKKNGFISSRTIS 152

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN------PVQWME------------ 161
             +    E +  D  V KG      ++ QY +   N      P + ++            
Sbjct: 153 QLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVM 211

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 212 KDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 268

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ FH+
Sbjct: 269 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYFHS 328

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 329 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLNHLDPECLRYYYAAK 388

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +   +RVNAD+ N I NL SR+   I K ++G + +     E     +
Sbjct: 389 LNSRIDDLDLNLEDFIQRVNADVVNKIVNLASRNAGFITKRFEGKLSSEFVEPELYNEFV 448

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 449 AAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 504

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R L   L+  +P+LA +
Sbjct: 505 VGINLFRVLMTYLKPVMPELAAR 527


>gi|254881246|ref|ZP_05253956.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777663|ref|ZP_06743114.1| methionine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|254834039|gb|EET14348.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448731|gb|EFG17280.1| methionine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 680

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 240/510 (47%), Gaps = 51/510 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 10  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DKG+  +     +
Sbjct: 70  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIEKTSMQY 129

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 130 YDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-RE 188

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217
            + ++  L  ++  L  +  E+H E+     R N   +  S++  GL+  ++SR   DWG
Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY
Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+
Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + ++++  LAI  + F+P  + K+  +L
Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509


>gi|317478291|ref|ZP_07937456.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316905598|gb|EFV27387.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 695

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 247/516 (47%), Gaps = 49/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 18  KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKENVIFIGGSDEHGVPITI 77

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   +S+D + RTT K HHDT    ++K+ DKG+  
Sbjct: 78  RAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFI 137

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  A+G Y +                     +  
Sbjct: 138 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGS 197

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  +++ L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 198 QPVM-RETKHWYLPLDKHEEWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 251

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD +  K+W       +H IG
Sbjct: 252 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFIG 308

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +    
Sbjct: 309 KDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGK 368

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     + R N +L    GN V+R++ +  K +D ++P  G
Sbjct: 369 QDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAG 428

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ 
Sbjct: 429 ELNDYDRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDM 488

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +R +T+L+++++++  LAI  + F+P  + K+  +L
Sbjct: 489 ERVATILHISLQLVANLAIAFEPFLPFSSEKLRKML 524


>gi|127512502|ref|YP_001093699.1| methionyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|187647772|sp|A3QD92|SYM_SHELP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|126637797|gb|ABO23440.1| methionyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 673

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 223/506 (44%), Gaps = 45/506 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ ARF +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              +  +  + Q  +   +D AD  +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 65  QLSMAPEEMIAQVQKEHQQDFAD-FNIQFDNFHSTHSDENRELASEIYLKLRDGGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM----------- 160
             S  +      +  D  V             G +     A ++P   +           
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSVDQYGDNCDSCGATYSPTDLIDPKSAVSGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +G
Sbjct: 184 VMKETEHFFFDLPAFEDMLKEWTRSGS---LQQEMANKLGEWFEQGLQQWDITRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L N   D +  +FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRSDLNFDEFWAKDSTAEVYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGFRKPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLNPEYLRYYYA 360

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   D    + +   +RVN+DL   + NL SR+   I K +DG +        +D S
Sbjct: 361 AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKV-----ADAS 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           +          I E  + +   +A+ ++++L    + +     PW+L K     + A  V
Sbjct: 416 LTETFLAKADAIAEFYETREFGKAMREIMALADIANAFVADAAPWQLVKEEDKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
               + + R L   L+  +PKLA  +
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLAQDV 501


>gi|150003455|ref|YP_001298199.1| methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|187646706|sp|A6KYR3|SYM_BACV8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|149931879|gb|ABR38577.1| Methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 680

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 240/510 (47%), Gaps = 51/510 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 10  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DKG+  +     +
Sbjct: 70  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIEKTSMQY 129

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 130 YDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-RE 188

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217
            + ++  L  ++  L  +  E+H E+     R N   +  S++  GL+  ++SR   DWG
Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY
Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+
Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + ++++  LAI  + F+P  + K+  +L
Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|84497814|ref|ZP_00996611.1| methionyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381314|gb|EAP97197.1| methionyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 601

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 235/522 (45%), Gaps = 61/522 (11%)

Query: 9   ISTAIAYP--NAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           I +A+A+P  N   H+GH     + +DV +R+ R+ G DVL  +G+DEHG  I   A   
Sbjct: 4   ILSAVAWPYANGPRHLGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILVLADQQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +  VD+N     +    L  +YD + RTT   H+   + L+K++   G + +    
Sbjct: 64  GVTPQELVDKNHAIIANELADLGCAYDLYTRTTTTNHYSVAQELFKQVHTNGYMIEQTTR 123

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQ-----------------WM 160
           G  S        D  +        Y  A G   +   N ++                 ++
Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYTEARGDQCDNCGNQLEPTDLIDPKSKINGETPEFI 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E + +F  L A    L  + E           R  VI F  + L+++     T   DWGI
Sbjct: 184 ETQHFFLDLPALAVALREWLEGREASGT---WRPNVIKFSLNILEEIRPRAMTRDIDWGI 240

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKD 266
            +P     D     +YVW DA+  YL+ +       G   ++  W  D      + +GKD
Sbjct: 241 PVPLEGWEDQSAKRLYVWFDAVIGYLSASVEWARRQGDPERWREWWNDPEALSYYFMGKD 300

Query: 267 ILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA LL+                L LP +V S  ++  +G++ S S G+VI 
Sbjct: 301 NITFHSQIWPAELLAYAGRGDKGGEPGTFGVLGLPTEVVSSEYLTMEGKQFSSSRGHVIY 360

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +V+E  G D +RYF+       +D  +      +R N++L  G GNLV+R+ +MI K 
Sbjct: 361 IRDVLERYGPDPIRYFICAAGPENQDSNFTWAEFVQRNNSELVAGWGNLVNRTGAMIAKS 420

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G IP PG     DE++ +        + + +  Q I  A+ + +  V +V++Y    +
Sbjct: 421 F-GEIPQPGPLEPVDEAVRAATLAAFDTVGDLLAKQRIKAAVNEAMRAVGDVNKYVTDTE 479

Query: 433 PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           P++LK  +  +R +TVL+  ++ +  L  +L  F+P  +N++
Sbjct: 480 PFKLKGDDQRERLATVLHTLIQCVSDLNTILAPFLPHASNRV 521


>gi|15618046|ref|NP_224330.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|4376385|gb|AAD18275.1| Methionyl-tRNA Synthetase [Chlamydophila pneumoniae CWL029]
          Length = 551

 Score =  172 bits (437), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 44/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE G  I   A 
Sbjct: 3   QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + +VD   +  +D  + L  + D F RTT   H +  +  + ++   G I    
Sbjct: 63  REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------ 160
               YS +++ +  D  V            +G + Q   A +  +  +            
Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIGPKSKISGVELV 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +F L   +D LLS+ +      LP   R  V+ +++  ++  +++R    WGI
Sbjct: 183 KKETEHSYFLLDRMKDALLSFIQG---CYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
            +PD P  + YVW DA   Y++ T        NPD  K +FW  D    +  IGKD L F
Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWK-RFWLEDGVEYVQFIGKDNLPF 296

Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L   L   K   +    F L +G + SKS GN +D  + +    +D LRY 
Sbjct: 297 HSVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYV 356

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESD 387
           L        D  +     K R N++L    GN ++R ++   K+ YD +        +SD
Sbjct: 357 LAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSD 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAST 446
            + L    +++++  +  +   + +A + ++SL +  + YF+ Q PW+ LK+   +R   
Sbjct: 417 RAFLEEARQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEA 476

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +L+      + LA++    +P+ A  I++++       C
Sbjct: 477 ILFCACYCQKLLALISYPIIPESAVAIWEMISPKSLENC 515


>gi|163787073|ref|ZP_02181520.1| methionine--tRNA ligase (methionyl-tRNA synthetase)
           [Flavobacteriales bacterium ALC-1]
 gi|159876961|gb|EDP71018.1| methionine--tRNA ligase (methionyl-tRNA synthetase)
           [Flavobacteriales bacterium ALC-1]
          Length = 682

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 240/513 (46%), Gaps = 53/513 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + +D+ AR+ RL G DV F  G+DEHG  I   A+  GV
Sbjct: 7   ITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLTGNDVAFICGSDEHGVPITIKAKKEGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     +   +   I++D++ RT+ K HHDT +  +K + +K +  +      
Sbjct: 67  TPQDIVDKYHAIIKKSFEDFGITFDNYSRTSAKIHHDTAQEFFKTLYNKNEFIEEVTEQL 126

Query: 128 YSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM--------------E 161
           Y      +  D            +E Y G   +     HN    +              E
Sbjct: 127 YDAEANQFLADRFIVGTCPKCGYEESY-GDQCENCGTSHNATDLINPKSAITGNVPTLKE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVISFVKSGLKDLSLSRKTF 214
            + +F  L+ ++D L        E+IL   +++       +V S+V  GL+  +++R   
Sbjct: 186 TKHWFLPLNKHEDFLR-------EWILKGHKKDWKPNVYGQVKSWVDDGLRPRAVTRD-L 237

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDI 267
            WGI +P +     ++YVW DA   Y++ T      +G   + +W  +    +H IGKD 
Sbjct: 238 GWGIPVPVEGGEGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKDEKTKLVHFIGKDN 297

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIE-EVGVDA 324
           + FH I +P+ L +  +  LP  V ++ F+  +G+K+S S    V  P  +I+     D 
Sbjct: 298 IVFHCIIFPSMLKAEGSYILPDNVPANEFLNLEGKKLSTSKNWAVWLPDYLIDFPNQQDV 357

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R V +  K YDG++P+P  +T
Sbjct: 358 LRYALTANAPESKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYDGVVPSPSNYT 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             DE  L+        I  +++      A  ++++L    ++Y   ++PW+  KT+  R 
Sbjct: 418 AIDEETLATVKAYPAVISSSIERYRFREASQELMNLARLGNKYLADEEPWKTIKTDEGRT 477

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            TV++V +++   LA+L + F+P  + K+  IL
Sbjct: 478 KTVMFVALQIASALAVLSEPFLPFTSVKLKGIL 510


>gi|332112154|gb|EGJ12130.1| methionyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 694

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 231/523 (44%), Gaps = 54/523 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL+++TA+ Y N   HIGH  E I AD+  R  R+ G +V F    D HG  I  AA+ A
Sbjct: 13  KLFVTTALPYANGPFHIGHVMEYIQADIWVRLQRMRGAEVRFVCADDAHGAPIMIAAEKA 72

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FV   +   +   D   I +D++  T    +H+  + ++  +     I      
Sbjct: 73  GKTPQQFVADIAAGRKQYLDGFHIQFDNWHSTDGPENHELAQSIYLALKANDLIEVRTIE 132

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
            ++   D+  +  D   KG      A  QY +               NP   +       
Sbjct: 133 QFFD-PDKGMFLPDRFIKGECPKCGAKDQYGDNCEVCGAVYAPTDLKNPYSALSGATPVL 191

Query: 162 --EEGYFFRLSAYQDKLLSYYES-------HPEFILPIERRNEVISFVKSGLKDLSLSRK 212
              E +FF+LS    + + Y ES        PE    +          +  L D  +SR 
Sbjct: 192 RTSEHFFFKLS--DPRCVEYLESWTQDGRLQPEVANKVREWFTRDEAGQVSLGDWDISRD 249

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFWPA--------DLHV 262
              +GI+IP  P    YVW+DA   YL +    ++ N  G  A  + A         +H 
Sbjct: 250 APYFGIEIPGAPGKYFYVWLDAPVGYLASLKNWFVKNVPGDAAAAFDAYLAQPELEQVHF 309

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FH ++WPA L  +    P +V+ HG +   GEK+SKS G  I P+  + E+G+
Sbjct: 310 IGKDIVTFHTLFWPAMLKFSGRKTPDRVYVHGHLTVSGEKMSKSRGTGISPLRYL-ELGL 368

Query: 323 DA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           DA  LRY++  ++ A  +D  ++ +    RVNADL     N+ SR+   + K + G + T
Sbjct: 369 DAEWLRYYIAAKLNARVEDLDFNPEDFVARVNADLVGKYVNIASRAAGFLAKRFGGRL-T 427

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                E   ++L         + E+ + +   +AL +V+ L   V+ Y D  KPWEL K 
Sbjct: 428 ADVGVEG-RALLDGLRAHAGVVLEHYETREYGKALREVMLLADRVNEYVDQNKPWELAKQ 486

Query: 440 NPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               A    V  V +E  R L + L+  +P  A ++   L +A
Sbjct: 487 QGAEARLHDVCTVCIEAFRLLTLYLKPVLPATAARVEAFLGIA 529


>gi|161723239|ref|YP_096876.2| methionyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|68565969|sp|Q5ZRJ9|SYM_LEGPH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 670

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 247/551 (44%), Gaps = 61/551 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
            A+  G+T +    +    + ++F+  A    I YD +  T    +      +++++   
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFA----IDYDYYHTTHSPENQALATTIFERLQAG 116

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM----- 160
           GDI K     +Y    + +  D  V             G + +   A ++P   +     
Sbjct: 117 GDIVKKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSV 176

Query: 161 ---------EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                    E E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +S
Sbjct: 177 ISGVSPVEKESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDIS 232

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIG 264
           R    +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +G
Sbjct: 233 RDAPYFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVG 292

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           KDI+ FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + 
Sbjct: 293 KDIVYFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEY 352

Query: 325 LRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           LRY+   ++  G+  D   + D    RVNADL   + N+ SR    I K +D  + +   
Sbjct: 353 LRYYFAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS--- 408

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
              +D+ + +      + + +   ++   RA+ Q++    +V++Y DA KPW L K  + 
Sbjct: 409 -ELNDQKLYNDLLSARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESK 467

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            +    +  + + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H
Sbjct: 468 LNEVHAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWDSIDKPL----LNH 521

Query: 501 K--TFDPIFPR 509
           +  TF P+  R
Sbjct: 522 RINTFKPLMVR 532


>gi|33241458|ref|NP_876399.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33235966|gb|AAP98056.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|269303003|gb|ACZ33103.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 551

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 44/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE G  I   A 
Sbjct: 3   QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + +VD   +  +D  + L  + D F RTT   H +  +  + ++   G I    
Sbjct: 63  REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------ 160
               YS +++ +  D  V            +G + Q   A +  +  +            
Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIDPKSKISGVELV 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +F L   +D LLS+ +      LP   R  V+ +++  ++  +++R    WGI
Sbjct: 183 KKETEHSYFLLDRMKDALLSFIQG---CYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
            +PD P  + YVW DA   Y++ T        NPD  K +FW  D    +  IGKD L F
Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWK-RFWLEDGVEYVQFIGKDNLPF 296

Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L   L   K   +    F L +G + SKS GN +D  + +    +D LRY 
Sbjct: 297 HSVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYV 356

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESD 387
           L        D  +     K R N++L    GN ++R ++   K+ YD +        +SD
Sbjct: 357 LAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSD 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAST 446
            + L    +++++  +  +   + +A + ++SL +  + YF+ Q PW+ LK+   +R   
Sbjct: 417 RAFLEEARQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEA 476

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +L+      + LA++    +P+ A  I++++       C
Sbjct: 477 ILFCACYCQKLLALISYPIIPESAVAIWEMISPKSLENC 515


>gi|229496222|ref|ZP_04389942.1| methionyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316800|gb|EEN82713.1| methionyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 730

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 247/539 (45%), Gaps = 43/539 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  I+ 
Sbjct: 53  KRFKRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMRGEEVLFIGGSDEHGVPISL 112

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     ++  +   I +D + RT+ + H +T    ++ + D     
Sbjct: 113 KAKAEGITPQQVVDRYHTLIKESFEQFGIDFDIYSRTSSRVHAETASQFFRTLYDNHKFI 172

Query: 121 KGCYSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPV--------------- 157
           +     +Y  + EA+  D  +          GA G    +    +               
Sbjct: 173 ERTSEQYYDPKAEAFLADRYIVGTCPHCHKPGAYGDQCESCGTSLNATDLIDPQSTISGA 232

Query: 158 --QWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +  E   ++  L  Y+D L  +  + H E+   +    +  S++  GL+  ++SR   
Sbjct: 233 KPELRETTHWYLPLDRYEDWLREWILDGHKEWKSNV--YGQCKSWIDMGLQPRAVSRD-L 289

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  P+  +   W  D     +H IGKD 
Sbjct: 290 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPETWET--WWKDSETRLIHFIGKDN 346

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E ++E     D 
Sbjct: 347 IVFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQEFPGKEDV 406

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN V+R+V +  K ++G +P  G  T
Sbjct: 407 LRYVLTANAPETKDNDFTWRDFQARNNNELVAIYGNFVNRAVVLTHKYFEGKVPEMGTLT 466

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E D++ L   + ++  +  ++       AL   + +    ++Y    +PW++ KT+  R 
Sbjct: 467 EYDQATLQEVADLVPHLERHLDEFHFRDALRDAMQIARIGNKYLADTEPWKVAKTDLSRV 526

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           +T+L+V +++   L+I    F+P    ++ D+L VA  +         L PG  L + F
Sbjct: 527 ATILHVALQISANLSIAFAPFLPFSTRRLLDLLRVAPFDWSSLGRADLLVPGHQLAEPF 585


>gi|218231128|ref|YP_002369842.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
 gi|226695274|sp|B7HD62|SYM_BACC4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218159085|gb|ACK59077.1| putative methionyl-tRNA synthetase [Bacillus cereus B4264]
          Length = 544

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   E      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKKVVEIVKE--KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVS 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+  Y + + +     G    +FW +D    +V GKD + FH
Sbjct: 240 IPVKGYEDKK--IYVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++   L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRSTLSIIKRN 506


>gi|52630188|gb|AAU28929.1| methionyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 693

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 242/547 (44%), Gaps = 53/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 24  MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 84  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 143

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 144 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGV 203

Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +SR   
Sbjct: 204 SPVEKESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAP 259

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+
Sbjct: 260 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIV 319

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+
Sbjct: 320 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 379

Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
              ++  G+  D   + D    RVNADL   + N+ SR    I K +D  + +      +
Sbjct: 380 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS----ELN 434

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
           D+ + +      + + +   ++   RA+ Q++    +V++Y DA KPW L K  +  +  
Sbjct: 435 DQKLYNDLLSARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEV 494

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--T 502
             +  + + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H+  T
Sbjct: 495 HAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWDSIDKPL----LNHRINT 548

Query: 503 FDPIFPR 509
           F P+  R
Sbjct: 549 FKPLMVR 555


>gi|330720454|gb|EGG98763.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 711

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 238/543 (43%), Gaps = 54/543 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I   A+  
Sbjct: 29  KILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKQRGETCTYVCADDAHGTAIMLRAEQM 88

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++ +  + +  ++   D AD   I +D++  T    + +    ++K   D G I +   
Sbjct: 89  GISAEEQIKRVQQDHEADFAD-FHIGFDNYYTTHSPENKELSEFIYKACRDSGHIAERSI 147

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG-------- 164
           +  +      +  D    KG      A+ QY        A +NP + +  +         
Sbjct: 148 TQAFDPEKNLFLAD-RFIKGTCPRCKAEDQYGDNCEACGATYNPTELINPKSAISGATPV 206

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 YFF+L  +++ L  +  S     L     N++  ++++GL++  +SR    +G 
Sbjct: 207 EKDSVHYFFKLPDFENMLKEWTRSG---TLQESVANKLNEWLEAGLQEWDISRDAPYFGF 263

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           +IPD P    YVW+DA   Y+ +   L     D     +W  D      H IGKDI+ FH
Sbjct: 264 EIPDAPGKYFYVWLDAPIGYIASFKNLCARRDDLDFDDYWAKDSDAEVYHFIGKDIINFH 323

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+   P  V +HGF+   G+K+SKS G  I     +  +  + LRY+   
Sbjct: 324 ALFWPAMLSCADFRTPTAVKAHGFVTVNGKKMSKSRGTFIQARTYLNHLNPEYLRYYFAA 383

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++  G +    + +   +RVN+D+   + N+ SR    I K +DG +      T S+ ++
Sbjct: 384 KLGNGTEDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFIKKRFDGKLSD----TVSNPAL 439

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
           L        +I E+ +N    +A+ ++++   + ++Y D QKPW L K            
Sbjct: 440 LDEVIAAGDQIAEHFENLEFSKAVREIMAQADKANQYIDEQKPWVLAKEEGRDQDVQDAC 499

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--PGFMLHKTFDPI 506
            + + + R L   L+  +P L       L V   N      D RL+   G  ++K F P+
Sbjct: 500 SMGIHLFRVLCTYLKPVLPALVANAETFLNVESLN-----WDDRLQTLTGHQINK-FKPL 553

Query: 507 FPR 509
             R
Sbjct: 554 MQR 556


>gi|54295707|ref|YP_128122.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|68565967|sp|Q5WST1|SYM_LEGPL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53755539|emb|CAH17038.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 670

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 241/547 (44%), Gaps = 53/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +SR   
Sbjct: 181 SPVEKESEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+
Sbjct: 237 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKTSKTELYHFVGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+
Sbjct: 297 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 356

Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
              ++  G+  D   + D    RVNADL   + N+ SR    I K +D  + +     + 
Sbjct: 357 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKL 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
              +LS    V+    +   ++   RA+ Q++    +V++Y DA KPW L K  +  +  
Sbjct: 416 HNDLLSARESVI----DAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEV 471

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--T 502
             +  + + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H+  T
Sbjct: 472 HAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINT 525

Query: 503 FDPIFPR 509
           F P+  R
Sbjct: 526 FKPLMVR 532


>gi|167569200|ref|ZP_02362074.1| methionyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 718

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 226/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  DV  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDVWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K  +++  R  +   D   +S+D+F  T    +      ++  + D G I K  
Sbjct: 77  QEGVTPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAKRE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGIDFDAWIKKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +  +L+     + +I  + + +   RAL Q + L  EV+ Y D  KPWEL K   + A+
Sbjct: 430 MNHPLLATLRDAIPQIAAHYEAREYGRALRQTMELADEVNGYVDTAKPWELAKDPANAAA 489

Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +     VA
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGVA 526


>gi|15835658|ref|NP_300182.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752922|ref|NP_445193.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|12644036|sp|Q9Z959|SYM_CHLPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7189567|gb|AAF38466.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978496|dbj|BAA98333.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 551

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 44/519 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE G  I   A 
Sbjct: 3   QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + +VD   +  +D  + L  + D F RTT   H +  +  + ++   G I    
Sbjct: 63  REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------ 160
               YS +++ +  D  V            +G + Q   A +  +  +            
Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIDPKSKISGVELV 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +F L   +D LLS+ +      LP   R  V+ +++  ++  +++R    WGI
Sbjct: 183 KKETEHSYFLLDRMKDALLSFIQG---CYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
            +PD P  + YVW DA   Y++ T        NPD  K +FW  D    +  IGKD L F
Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWK-RFWLEDGVEYVQFIGKDNLPF 296

Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L   L   K   +    F L +G + SKS GN +D  + +    +D LRY 
Sbjct: 297 HSVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYV 356

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESD 387
           L        D  +     K R N++L    GN ++R ++   K+ YD +        +SD
Sbjct: 357 LAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSD 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRAST 446
            + L    +++++  +  +   + +A + ++SL +  + YF+ Q PW+ LK+   +R   
Sbjct: 417 RAFLEEVRQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEA 476

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +L+      + LA++    +P+ A  I++++       C
Sbjct: 477 ILFCACYCQKLLALISYPIIPESAVAIWEMISPKSLENC 515


>gi|11499048|ref|NP_070282.1| methionyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122911|sp|O28819|SYM_ARCFU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2649118|gb|AAB89796.1| methionyl-tRNA synthetase (metS) [Archaeoglobus fulgidus DSM 4304]
          Length = 658

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 229/509 (44%), Gaps = 46/509 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + H+GH    + ADV  R+ R+ G +V+F  G+D HG  I   A+  G++
Sbjct: 4   VTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K  VD    +F  + D L+I +D + RT    HH     + K++ +KG +Y       Y
Sbjct: 64  PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLAY 123

Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163
             + + +  D                DE  +G        +          +  ++  + 
Sbjct: 124 CPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGEIKEPRCKICGSKAEFRSQR 183

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS--LSRKTFDWGIKIP 221
            YFF+L+ +QD L  Y       +  ++     +++ ++ +K+L      +  +WG++ P
Sbjct: 184 HYFFKLTEFQDFLEDY-------LSKLKGTENALNYARNWVKNLRDWCITRNLEWGVRFP 236

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADLHVIGKDILRFHAIYWP 276
            +P  ++YVW+DA   Y++ T       G    K W       +H IG DI+  H I+WP
Sbjct: 237 GEPNLVVYVWVDAPIGYISFTEKACEEKGCDWRKIWIDGDAEIIHFIGLDIVYHHCIFWP 296

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334
           A L  A+  LP  V + G +  +G+  SKS G V+   E   + G+  D LRY++V   +
Sbjct: 297 AMLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTS 356

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +  +  +++VN ++   +GN + R +    K++ G +   G     DE +L   
Sbjct: 357 HQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNF-GEVRMEGV----DEEVLEKI 411

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
               Q+I   ++      A    + L +  + YF   KPWEL KT+ + A   +   +++
Sbjct: 412 RETEQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTDKEAARRAVASCLQL 471

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
            + L I     +P+   ++   + +  EN
Sbjct: 472 AKALIIFAYPVMPESMERMAKAIGLDLEN 500


>gi|228948767|ref|ZP_04111044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228810899|gb|EEM57243.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 544

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 245/540 (45%), Gaps = 54/540 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++ +  E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G   + FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDREFWDGEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPNGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I   A LL+ F+P  + +I + L + + N          +P   L    D + P F
Sbjct: 474 CVYLIANFANLLEPFLPFSSERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 524


>gi|288929286|ref|ZP_06423131.1| methionine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329388|gb|EFC67974.1| methionine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 687

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 240/539 (44%), Gaps = 51/539 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV+F  G+DEHG  I  
Sbjct: 10  KQYKRTTITAALPYANGGVHIGHLAGVYVPADIYARYMRLKNEDVVFIGGSDEHGVPITI 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +  VD+     +   +   IS+D + RTT   HH      +KK+ + G + 
Sbjct: 70  RARKEGVSPQDVVDRFHAMIKKSFEDFGISFDIYSRTTSPTHHQLASDFFKKLYEDGKLL 129

Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGADGQYYNAQH-------- 154
           +     +Y                     +E  Y D     G D       H        
Sbjct: 130 EKETEQYYDEEAHQFLADRYIMGECPHCHNEGAYGDQCEKCGRDLSPTELLHPRSTISGS 189

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   + + ++  L  YQD L  +  E H E+      R  V    KS L DL L  + 
Sbjct: 190 QPVL-KKTKNWYLPLDKYQDWLKEWILEGHKEW------RPNVYGQCKSWL-DLDLQPRA 241

Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVI 263
                DWGI +P +     ++YVW DA   Y++ T  L  PD +  K+W       +H I
Sbjct: 242 MTRDLDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFI 299

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +P  L +     LP+ V ++ F+  + EKIS S    +   E +E+   
Sbjct: 300 GKDNIVFHCIVFPVMLKAHGGYILPENVPANEFLNLEDEKISTSKNWAVWLHEYLEDFPG 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     ++R N +L    GN V+R++ +  K + G +P  
Sbjct: 360 KQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFGGRVPAC 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E D+  L     V +++   +       A  + + L    +RY    +PW++ KT+
Sbjct: 420 GELNEVDKQALDEFKDVKEKVEGLLDTYKFRDAQKEAMMLARIGNRYITECEPWKVWKTD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           P R  T+LY++++++  LAI  + F+P  + K+  +L +   +       + LKPG  L
Sbjct: 480 PKRVETILYISLQLVANLAIAFEPFLPFSSAKLRSMLNMEGVDWNVLGNTEILKPGHQL 538


>gi|224824466|ref|ZP_03697573.1| methionyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224602959|gb|EEG09135.1| methionyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 702

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 236/540 (43%), Gaps = 68/540 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  DV  RF ++ G    +    D HG  I  
Sbjct: 1   MTSPRKILVTSALPYANGAIHLGHMVEHIQTDVWVRFQKMRGHACHYVCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA+  G+T +  +++  + +  D      I YD++  T    +      +++ +   G I
Sbjct: 61  AAEKQGITPEQLIERVKAEHLADFTG-FHIGYDNYYSTNSPENKHFAEHIYRTLRANGKI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160
                   +    + +  D  V       GA  QY        A ++P            
Sbjct: 120 VSRTIEQLFDPEKQMFLPDRFVKGECPKCGAKDQYGDNCESCGATYSPTDLKNPYSAVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYY---------ESHPEFILPIERRNEVISFVKSGLK 205
                   E YFFRL    D L ++          E+ P   L  E  N++  +++ GL 
Sbjct: 180 ATPVLKSSEHYFFRLGDCADFLKAWTAGSSVRPDGETQPH--LQHESLNKMNEWIEGGLH 237

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWP---ADL 260
           D  +SR    +G +IPD P    YVW+DA   Y+ +   L    G      F P   A+L
Sbjct: 238 DWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCEKSGLDFDDYFGPDSDAEL 297

Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            H IGKDIL FHA++WPA L  +    P  VF+HGF+   G+K+SKS G  I     + +
Sbjct: 298 YHFIGKDILYFHALFWPAMLKYSGYRAPTGVFAHGFLTVDGQKMSKSRGTFITAKSYL-D 356

Query: 320 VGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            G++   +RY++  ++ A  +D     D    RVN+DL     N+ SR+   I K + G 
Sbjct: 357 CGLNPEWMRYYVAAKLNARIEDIDLSLDDFVARVNSDLIGKFVNIASRAAGFITKRFGGR 416

Query: 377 IPTPGAFTESDESILS-VCSR------VLQEIRENMQN-------QLIHRALAQVISLVS 422
           +    A + S  ++ S VC        +LQ++ E+          +   RAL  V++L  
Sbjct: 417 L----AESVSSSALASPVCHAAQCEHPLLQQLAESSATLAAAYEAREYARALRDVMALAD 472

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           EV+ Y D  KPWEL K      R   V  V V   R LAI L+  +PKLA  +   L VA
Sbjct: 473 EVNAYVDTNKPWELAKQEGMEARLHEVCTVLVNAFRLLAIYLKPVLPKLAADVEAFLNVA 532


>gi|91227376|ref|ZP_01261765.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188640|gb|EAS74930.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 679

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 219/503 (43%), Gaps = 46/503 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  G
Sbjct: 1   MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S 
Sbjct: 61  ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTISQ 120

Query: 127 WYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM--------E 161
            +    E +  D             D+     D  G+ Y+     NP   +        +
Sbjct: 121 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +IP
Sbjct: 181 SEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
            +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ FH+++
Sbjct: 238 GEKNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSLF 297

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   ++ 
Sbjct: 298 WPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKLN 357

Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++ 
Sbjct: 358 SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAA 417

Query: 394 CSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
             R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 418 ADRIAELYETRE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 471

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R L   L+  +P LA +
Sbjct: 472 VGINLFRVLMTYLKPVMPSLAAR 494


>gi|229087542|ref|ZP_04219674.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228695789|gb|EEL48642.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 544

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 241/525 (45%), Gaps = 46/525 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHVASLLPGDILARYYRAKGEKVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D     F+     L  +YD + RT  + HH+T + ++ ++ ++  IYK     
Sbjct: 63  VTAKEIADHYHEEFQRCFQHLGFTYDCYTRTDTQHHHETVQKIFLRLLEEDFIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEPSRGDQCDACSAILDPLDLLEKKCKLCGNTPAVKET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  + +++     +  +      R N V     +++ GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHKFHEQIKDAVATAKQ--KRTWRDNAVQLTERYLQEGLQDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A++ Y + +  + +       +FW + +   +V GKD + FH
Sbjct: 240 IPVKGYEDKK--IYVWIEAVSGYYSASKRWAEEAGKDDGEFWSSSVKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K YDG +P      +  E +
Sbjct: 358 TNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHVNLKLKEKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             + S V   I +         AL  +   V   ++YFD Q PW+ ++ +P      +Y 
Sbjct: 418 EELYSSVGNAIEQAH----FKVALETIFETVRFANKYFDEQAPWKQREEDPAACEETIYT 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLK 494
            V  I   A LL+ F+P  + ++ ++L + +   +C  +L +R+K
Sbjct: 474 CVYFIVNFAQLLEPFLPFSSERVRNMLAITNAGWKCESALPERVK 518


>gi|34496661|ref|NP_900876.1| methionyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|68565993|sp|Q7NYR7|SYM_CHRVO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|34102516|gb|AAQ58881.1| methionyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 689

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 243/558 (43%), Gaps = 75/558 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y NA  H+GH  E I  D+  RF ++ G +  +    D HG  I  AA+
Sbjct: 6   KRKILVTSALPYANAGLHLGHMLEQIQTDIWVRFQKMRGHECYYVCADDTHGAPIMLAAE 65

Query: 64  NAGVTTKVFVDQ----------------------NSRNFRDMAD--VLDISYDDFI--RT 97
             G+T +  V++                      NS   + +A+   L +  DD I  RT
Sbjct: 66  KRGITPEQLVNEVRELHVADSQGFLIGHDNYYSTNSPENKALAEQVYLALKADDKIACRT 125

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYNDDEV---YKGADGQYYN 151
            E+      ++       KG+  K      Y    E   A Y   E+   Y    G    
Sbjct: 126 IEQLFDPEKQMFLPDRFVKGECPKCSAKDQYGDNCEVCGATYAPTELKNPYSAVSGA--- 182

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-------LPIERRNEVISFVKSGL 204
               PV    E  +FFRL    D L ++               L  E  N++  ++  GL
Sbjct: 183 ---KPVLKTSEH-FFFRLGECADFLKAWTSGASRRADGAVQPHLQPESLNKMNEWIGGGL 238

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPAD 259
           +D  +SR    +G +IP  P    YVW+DA   Y+ +   L      N D   AK    +
Sbjct: 239 QDWDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYMASFKNLCERLNLNFDEWFAKDSQTE 298

Query: 260 L-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           + H IGKDIL FHA++WPA L  + L  P  VF+HGF+   G+K+SKS G  I     + 
Sbjct: 299 MYHFIGKDILYFHALFWPAMLNYSGLRAPTGVFAHGFLTVDGQKMSKSRGTFIQAKSYL- 357

Query: 319 EVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           + G++   +RY++  ++    +D   + +    RVN+DL     N+ SRS   I K +DG
Sbjct: 358 DCGLNPEWMRYYIAAKLNGRIEDIDLNLNDFVARVNSDLVGKFVNIASRSAGFIAKRFDG 417

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           M+    A   SD  IL+      +E+    + +   +AL  V++L   V+ Y DA KPWE
Sbjct: 418 ML----AAQVSDGEILAKLQAAAEELAAAYEAREYAKALRDVMALADIVNGYVDANKPWE 473

Query: 436 LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI-------------FDILFVA 480
           L K      R   V  V V   R LAI L+  +PKLA  +              + L + 
Sbjct: 474 LAKQEGQDARLQDVCTVLVNAFRLLAIYLKPVLPKLAEGVEAFLDVAPLSWHDAETLLLG 533

Query: 481 DENRCFQSLDQRLKPGFM 498
            +   +Q L QR+ P  +
Sbjct: 534 KKINAYQHLMQRIDPALI 551


>gi|330446439|ref|ZP_08310091.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490630|dbj|GAA04588.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 681

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 224/506 (44%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + + S+  +      DI + ++  T    + +    ++ ++ +KG I     S
Sbjct: 67  GMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYTQLKEKGFITSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158
             +    E +  D  V KG      A+ QY +   N                     PV 
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTKSG---ALQDETANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH
Sbjct: 242 EIPGETGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEYWNKDSSTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLKHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVN+D+ N I NL SR+   I K +DG +       E     
Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEF 421

Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
           ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          
Sbjct: 422 VAAADRIGELYESRE------YGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  V + + R L   L+  +PKLA +
Sbjct: 476 ICTVGINLFRVLMAYLKPVMPKLAER 501


>gi|229158640|ref|ZP_04286698.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228624624|gb|EEK81393.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 544

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRSLGFTYDCYTRTDGEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWGKEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKQREDDPVLCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|158320039|ref|YP_001512546.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|187645698|sp|A8MG12|SYM1_ALKOO RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|158140238|gb|ABW18550.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 540

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 232/500 (46%), Gaps = 41/500 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  DV+AR+ R  G +VL+ +G+D HG  I+  A+N  
Sbjct: 3   IFIGGAWPYANGSLHLGHVAALLPGDVMARYFRAKGENVLYVSGSDCHGTPISIRAKNEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ +   +Q  + F+   + L  SYD + RT +  H +  + + K + +   IY+     
Sbjct: 63  VSPQEIAEQYHKEFKYCFEELGFSYDYYSRTDDAYHKEEVQRIIKLLYENEFIYEKEVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEG------------ 164
            Y      +  D            + +G      +   +P+     +             
Sbjct: 123 LYCADCNQFLPDRFVEGICPVCKNIARGDQCDVCSTILDPLDLHHRKCKICGSEPEIKNG 182

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              FF+LS +Q+ L ++ E   +    +   N    ++K GL+D ++SR   +WGI+IP 
Sbjct: 183 NQLFFKLSKFQEMLQNHLEDSKK-KWRVNALNNTERYLKEGLQDRAISR-DLNWGIEIPI 240

Query: 223 D--PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD-LH--VIGKDILRFHAIY 274
               +  +YVWIDA+  Y T +   G   N D     FW  + +H  + GKD + FH++ 
Sbjct: 241 KGYEEKRVYVWIDAVLGYYTVSKKWGIERNRDWET--FWSKEAIHYFIHGKDNIPFHSLI 298

Query: 275 WPAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +PA L       +P ++ S  +I  +G+KIS S    +   ++IE   VD++RYFL+   
Sbjct: 299 FPALLNGIGYKKMPDRIISSEYITLEGKKISTSNNWAVWVPDMIERYNVDSIRYFLLANG 358

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +         N +L    GNLV+R+   + K ++  IP      + +E I   
Sbjct: 359 PEKRDADFSWREFINSNNGELLGAYGNLVNRTFVFVKKYFNNTIPV----GKLEEEIERA 414

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++  E+ +++++  +  AL Q+   +  +++YFD + PW    TN D  S  +Y  + 
Sbjct: 415 TEKLYDEVGKSIESGNLRLALEQIFQFIRSINKYFDEETPWTTVNTNIDDCSNTIYNCLF 474

Query: 454 VIRQLAILLQAFVPKLANKI 473
            I  +A LL  F+P  + KI
Sbjct: 475 SIINIANLLNPFLPSSSAKI 494


>gi|315426202|dbj|BAJ47845.1| methionyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315426284|dbj|BAJ47926.1| methionyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 514

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 221/473 (46%), Gaps = 39/473 (8%)

Query: 46  LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
           +F +G+DEHG  I   A   GV  +   D+N     ++ +   +S+D++ RT    H   
Sbjct: 1   MFVSGSDEHGTPIEVEAAKRGVDPREITDKNHALVVELFNKFHLSFDNYTRTHNPTHIAF 60

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH--- 154
           C+  + KI + G IY+   +  Y      +  D  V        Y+ A G    A     
Sbjct: 61  CQNFFMKIYENGYIYEQDVNQLYCKNCGRFLPDRFVTGVCPSCGYQRARGDQCEACGKVL 120

Query: 155 NPVQWMEEEG--------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +P+  +E                 +FF L  + DKL ++  ++    L  + RN  +S++
Sbjct: 121 DPLDLLEPRCSICGEKPVVESSRHWFFDLPQFSDKLRTWLTTNT--TLSEKVRNFSLSWI 178

Query: 201 KSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KF 255
           + GLK  +++R    WGI    P      +YVW +A+  Y + T       G  A   +F
Sbjct: 179 REGLKPRAVTRDNL-WGIPAPFPGAGNKTIYVWFEAVLGYPSATVEWAEKKGEPALWREF 237

Query: 256 WPA----DLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGN 309
           W +      + IGKD + FH +  PA LL+ + P  LP  V +  ++  +G+K SKSLG 
Sbjct: 238 WLSPDTKSAYFIGKDNIPFHTVILPALLLATHEPYILPHIVSATEYLTFEGKKFSKSLGV 297

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            I   + I  +  D  RY+LV+      D  +  DGL   VN+DL N +GN + R ++ I
Sbjct: 298 GIWLDQAIALLEADIWRYYLVKIRPETGDTNFSYDGLMAVVNSDLNNDLGNFIHRVLTFI 357

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
             ++D  IP     TE D  +L+   +   E+   +      +AL  VI L  E + YF+
Sbjct: 358 NNNFDAKIPPATHLTEEDREMLAAIEKTFTEVDSLLSEAREKQALETVIQLAREGNVYFN 417

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++PW L K   + A+TVLYV  +V++ LA+LL  F P    +I +++   +E
Sbjct: 418 RREPWRLVKARKEEAATVLYVAAQVLKALALLLAPFTPATTRRILELIGQGEE 470


>gi|118594693|ref|ZP_01552040.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440471|gb|EAV47098.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 553

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 241/536 (44%), Gaps = 64/536 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+  ++A+ Y N   H+GH  E I  D+  R+ RL G ++ +    D HG  I   A+  
Sbjct: 3   KIIATSALPYANGSIHLGHLVEYIQTDIWVRYQRLVGNEIHYICADDTHGTPIMLRAEKE 62

Query: 66  GVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           G++ +  V+    ++S +F D     +IS+D+F  T    + +    L+K +     I  
Sbjct: 63  GISPEQLVENVHKEHSADFSD----FNISFDNFYSTNSIENKNLSEALYKSLVGNNKIEA 118

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME-------- 161
                +Y  +   +   D   KG      A+ QY ++       ++P   ++        
Sbjct: 119 KEIEQFYDDKKNMFL-PDRFIKGTCPKCKANDQYGDSCESCGTTYSPTDLIDAYSVLTGS 177

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  E YFF+LS  +  L  + +S     L  E  N++  + K+GL D  +SR    
Sbjct: 178 KPVKKKTEHYFFKLSECESFLSEWTQSD---TLQKEALNKLQEWFKAGLADWDISRDAPY 234

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y+ +   Y D  + S  +FW  D     +H IGKDIL 
Sbjct: 235 FGFEIPGAPGKYFYVWLDAPIGYMASFKNYADKNNLSYDEFWNKDSTTELVHFIGKDILY 294

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-DALRYF 328
           FHA++WPA L  +    P K+++HGF+   GEK+SKS G  I     I+     D LRY+
Sbjct: 295 FHALFWPATLKYSGHRTPSKIYAHGFLTVNGEKMSKSRGTFITARSYIDAFKTPDYLRYY 354

Query: 329 LVREIACGKDGFYD----KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
              ++    D   D     D    +VN+DL   + N+ SR+   + K +D  I     F 
Sbjct: 355 YFSKL---NDSMGDIDLSLDDFIVKVNSDLIGKLVNIPSRTSGFVTKFFDNKIMLTTYFN 411

Query: 385 ESDESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           ES+  IL V + +L   E+    + +   +    +IS V  V+ + + ++PW L K +  
Sbjct: 412 ESESQIL-VNNILLSKDEVTRLFEARQFSKICRLLISHVESVNEFVNNKEPWILAKDDAH 470

Query: 443 RAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +        V    ++  R L+I L   +P L  KI    F  +E   F S+D  L
Sbjct: 471 KMKDSYLHEVCSAALQSFRLLSIYLSPIMPDLTKKIAS-FFNQEE---FSSIDNLL 522


>gi|78485381|ref|YP_391306.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123728026|sp|Q31GU1|SYM_THICR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78363667|gb|ABB41632.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 680

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 225/508 (44%), Gaps = 43/508 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ I++A+ Y N   H+GH  E I  D+ ARF ++ G +  +    D HG  I  
Sbjct: 1   MSNTRKILITSALPYANGPIHLGHLVEYIQTDIWARFQKMRGHECYYVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  +  + + S   +      +I++D +  T    +      ++ ++ ++  I 
Sbjct: 61  RAQAEGIDPEDLIARISEEHQTDFAGFNINFDFYHSTNSPENKHFASYIYTQLKEQNHIS 120

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWM-------- 160
           +     +Y    + +  D            D+ Y G + +   A ++P   +        
Sbjct: 121 RKTIKQFYDPEKKMFLPDRFIKGTCPKCKTDDQY-GDNCEACGATYSPTDLLNPKSAVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E +  FF LS ++D L  + ++ H    L  +  N++  + +SGL+   +SR  
Sbjct: 180 ATPIEKETDHLFFELSHFEDMLKEWTHQGH----LQTQIANKLDEWFESGLRAWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267
             +G +IP +     YVW+DA   Y+ +   L +  G    +FW AD      H IGKDI
Sbjct: 236 PYFGFEIPGEKDKFFYVWLDAPVGYMASFKALCDKTGLDFDEFWKADSTTELYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  +FSHGF+   G+K+SKS G  I     ++ +  + LRY
Sbjct: 296 IYFHALFWPAMLSGAGFRTPNAIFSHGFLTVDGQKMSKSRGTFIMAKTYLDHLNPEYLRY 355

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++    D      +   +RVN+DL   + N+ SR    + K +DG +    A+++S
Sbjct: 356 YFAAKLNSRIDDIDLSLEDFAQRVNSDLVGKVVNIASRCAGFVSKKFDGKLSQ--AWSDS 413

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
             ++        + I    + +   +A+ ++++L  + + Y D   PW L K     A  
Sbjct: 414 ASTLYQSFIDKSETIANLYEQREYAQAMREIMALADKANEYIDETAPWVLAKQEGKEAEL 473

Query: 447 VLYVT--VEVIRQLAILLQAFVPKLANK 472
              V+  + + R L   L   +P  A K
Sbjct: 474 YESVSLGINLFRVLITYLAPVIPTTAEK 501


>gi|309787976|ref|ZP_07682585.1| methionyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924110|gb|EFP69608.1| methionyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 652

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 219/483 (45%), Gaps = 45/483 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +     
Sbjct: 3   EHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA- 145
            +ISYD++  T  + +     +++ ++ + G I     S  Y   ++  +  D   KG  
Sbjct: 63  FNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYD-PEKGMFLPDRFVKGTC 121

Query: 146 -----------DGQYYNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYY 180
                      + +   A ++P + +E               E +FF L ++ + L ++ 
Sbjct: 122 PKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            S     L  +  N++  + +SGL+   +SR    +G +IP+ P    YVW+DA   Y+ 
Sbjct: 182 RSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMG 238

Query: 241 TTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           +   L +  G    F   W  D      H IGKDI+ FH+++WPA L  +N   P  +F 
Sbjct: 239 SFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFV 298

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351
           HG++     K+SKS G  I     +     D+LRY+   +++   D    + +   +RVN
Sbjct: 299 HGYVTVNSAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVN 358

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N + NL SR+   I K +DG++ +  A    D  +    +   + I E  +++   
Sbjct: 359 ADIVNKVVNLASRNAGFINKRFDGVLASELA----DPELYKTFTDAAEVIGEAWESREFG 414

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
           +A+ ++++L    +RY D Q PW + K     A    +  + + + R L   L+  +PKL
Sbjct: 415 KAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKL 474

Query: 470 ANK 472
             +
Sbjct: 475 TER 477


>gi|170726330|ref|YP_001760356.1| methionyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|226710923|sp|B1KQM2|SYM_SHEWM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169811677|gb|ACA86261.1| methionyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 688

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 236/507 (46%), Gaps = 47/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 65  QMGIEPEEMIAQVNREHQQDFAD-FNIQFDNFHSTHSVENRELSSDIYLKLRDAGFIKTR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      ++ QY        A +NP   +          
Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     +  E  N++  + + GL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPAFETMLSEWTRSG---AIQDEIANKLGEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +   D +   FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSSAEVYHFIGKDIVN 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGFRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +    A T  ++
Sbjct: 360 AAKLSGRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKL-AKVADTSLEQ 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L   + ++ E+ E+ +     +A+ ++++L    + Y     PW+L K     + A  
Sbjct: 419 TFLGKQT-LIAELYESRE---FGKAMREIMALADLANAYVADAAPWQLIKDEAKQEEAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
           V    + + R L   L+  +PKLA+ +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPKLADDV 501


>gi|228942204|ref|ZP_04104744.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975133|ref|ZP_04135692.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981772|ref|ZP_04142067.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228777884|gb|EEM26156.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228784654|gb|EEM32674.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817538|gb|EEM63623.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942856|gb|AEA18752.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 544

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   E      R N +     +VK GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKKVVEIAKE--KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVS 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  ++VWI+A+  Y + + +     G    +FW +D    +V GKD + FH
Sbjct: 240 IPVKGYEDKK--IHVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K YDG +P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGTVPKGTIDIELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++   L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRSTLSIIKRN 506


>gi|294675168|ref|YP_003575784.1| methionine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472184|gb|ADE81573.1| methionine--tRNA ligase [Prevotella ruminicola 23]
          Length = 688

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 244/521 (46%), Gaps = 45/521 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +VLF  G+DEHG  I  
Sbjct: 4   KTYKRTTVTSALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVLFIGGSDEHGVPITV 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+  +  +D  +   IS+D + RTT + HH      +KK+ D+G + 
Sbjct: 64  RARKEGITPQDVVDRYHKMIKDSFEEFGISFDIYSRTTSETHHKFAAEWFKKLYDEGKLT 123

Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGAD---GQYYNAQHN---- 155
           +      Y                     +E  Y D     G D    +  N +      
Sbjct: 124 EETTEQLYDEEAKQFLADRYVTGECPHCHNEGAYGDQCEKCGRDLSPTELINPKSTISGS 183

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   + + ++  L+ YQD L  +  E H E+   +    +  S++   L+  +++R  
Sbjct: 184 TPVL-KKTKNWYLPLNEYQDWLKQWILEEHKEWRPNV--YGQCKSWLDMDLQPRAMTRD- 239

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----LHVI 263
            DWGI +P  D    ++YVW DA   Y++ T  L   +    G+  K+W  +    +H I
Sbjct: 240 LDWGIPVPVKDAEGKVLYVWFDAPIGYVSNTKELCEKEPEKWGNWEKWWQDEDTRLVHFI 299

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +P  + +     +P  V ++ F+  + +KIS S    +   E + ++  
Sbjct: 300 GKDNIVFHCIIFPVMMKAHGKYIMPDNVPANEFLNLENDKISTSRNWAVWLHEYLVDMPG 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K ++G++P  
Sbjct: 360 KQDVLRYVLTANAPETKDNNFTWKDFQDRNNNELVAVYGNFVNRALQLTKKYWNGVVPAC 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G + + D   +     V  +I EN++      A  + ++L    +RY    +PW++ KT+
Sbjct: 420 GEWLDVDRQAIEEFKNVKIKIEENLEQFKFRDAQFEAMNLARIGNRYITECEPWKVWKTD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           P R  T+L + +++   LAI  + F+P  + K+ ++L +++
Sbjct: 480 PKRCETILNICLQLTANLAIAFEPFLPFSSKKLREMLNISN 520


>gi|91793410|ref|YP_563061.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123356753|sp|Q12MI8|SYM_SHEDO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91715412|gb|ABE55338.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 689

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 233/513 (45%), Gaps = 55/513 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  D+ +RF ++ G +  +    D HG  I   
Sbjct: 3   QSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKMRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AQ  G+  +  + Q    + +D AD  ++++D+F  T  + + +    ++ K+ D G I 
Sbjct: 63  AQQLGIAPEAMIAQVQIEHEQDFAD-FNVAFDNFHSTHSEENRELASDIYIKLRDAGHIK 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQYYN---------------------AQ 153
               S  Y   +++ +  D   KG      +D QY +                     + 
Sbjct: 122 TKTISQLYD-PEKSMFLPDRFVKGTCPKCKSDDQYGDNCDSCGATYSTTDLINPRSAVSG 180

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             PV   + E +FF L A++  L  +  S     L  E  N++  + + GL+   +SR  
Sbjct: 181 ATPVM-KDTEHFFFDLPAFEGMLKEWIHSGS---LQSEMANKLNEWFEQGLQQWDISRDA 236

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD-----LHVI 263
             +G +IPD P    YVW+DA   Y+   G   N    +       FW  D      H I
Sbjct: 237 PYFGFEIPDAPGKYFYVWLDAPIGYM---GSFKNFCAKRGDINFDDFWAKDSTAEVYHFI 293

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  +
Sbjct: 294 GKDIVYFHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPE 353

Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   D    + +   +RVN+DL   + NL SR+   I K +DG +     
Sbjct: 354 YLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLANV-- 411

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
              +D S+        + I E  + +   +A+ +++++    + +   Q PW+L K +  
Sbjct: 412 ---TDNSLAESFIAKQEVIAEFYEAREYGKAMREIMAMADIANGFVAEQAPWQLVKDDDK 468

Query: 443 RAST--VLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A    V  + + + R L   L+  +P+L+  +
Sbjct: 469 QAQAHEVCSIALNLFRILTTYLKPVLPRLSQDV 501


>gi|319900739|ref|YP_004160467.1| methionyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415770|gb|ADV42881.1| methionyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 680

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 247/513 (48%), Gaps = 43/513 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEEVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   +   IS+D + RT+ K HHDT    ++K+ +KG+  
Sbjct: 63  RAKKEGVTPQDVVDRYHTLIKKSFEDFGISFDVYSRTSSKTHHDTASDFFRKLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSMQYYDEEAKQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   E + ++  L  +++ L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 183 KPVM-RETKHWYLPLDKHENWLRRWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
            DWGI +P +     ++YVW DA   Y++ T  L  P+ S  K+W       +H IGKD 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPE-SWEKWWKDPETRLVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D 
Sbjct: 297 IVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN V+R++ +  K +DG++P     T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAAGLT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R 
Sbjct: 417 DYDRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +T+L + ++++  LAI  + F+P  ++K+  +L
Sbjct: 477 ATILNIALQLVANLAIAFEPFLPFSSDKLRKML 509


>gi|28807062|dbj|BAC60332.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 676

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 220/503 (43%), Gaps = 46/503 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  G
Sbjct: 1   MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S 
Sbjct: 61  ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ 120

Query: 127 WYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM--------E 161
            +    E +  D             D+     D  G+ Y+     NP   +        +
Sbjct: 121 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +IP
Sbjct: 181 SEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
            +     YVW+DA   Y+ +   L N   D    ++W  D      H IGKDI+ FH+++
Sbjct: 238 GEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLF 297

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   ++ 
Sbjct: 298 WPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLN 357

Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++ 
Sbjct: 358 SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAA 417

Query: 394 CSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
             R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 418 ADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICS 471

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R L   L+  +P LA +
Sbjct: 472 VGINLFRVLMTYLKPVMPALAAR 494


>gi|194290515|ref|YP_002006422.1| methionyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|226710902|sp|B3R678|SYM_CUPTR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|193224350|emb|CAQ70361.1| methionine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 688

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 239/536 (44%), Gaps = 64/536 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+  
Sbjct: 5   RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D++  T  + + + C  ++  +  +  I +    
Sbjct: 65  GITPKALIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKAEDLIAEREVE 124

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161
            +Y      +  D     E  K GA  QY ++              NP   +        
Sbjct: 125 QFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRK 184

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTFD 215
               YFF+LS    +  S+       +   E  N++  ++      S L D  +SR    
Sbjct: 185 SSAHYFFKLS--DPRCESFLREWVADLAQPEAANKMQEWLGAEGEASTLSDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFKNLAQQRGIDFDAWVGPHSTAEQYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+
Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYY 362

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D    RVN+DL     N+ SR+   ++K +DG +         D
Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFDGKV---------D 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPWELKKT 439
           E+ L+    +L+++RE    Q+ H        +AL  V+ L   V+ + D +KPWEL K 
Sbjct: 414 EAALA--HPLLEQLRE-AAPQVAHLYESREYSKALRLVMELTDAVNAFVDTEKPWELAKD 470

Query: 440 NPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +  RA+      V++E  R L I L+  VP +A  +   L VA  +  ++++DQ+L
Sbjct: 471 DGKRAALHAACSVSLEAFRLLTIYLKPVVPNVAAGVERFLNVAPLD--WRAIDQQL 524


>gi|149188165|ref|ZP_01866460.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148838153|gb|EDL55095.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 688

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 221/504 (43%), Gaps = 46/504 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNVVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 72  GISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPIMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ FH++
Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFEEYWNKDSNTELYHFIGKDIVYFHSL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   ++
Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSENFAEPELYNEFVA 428

Query: 393 VCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVL 448
              R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 429 AADRIAELYEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P LA +
Sbjct: 483 SVGINLFRVLMTYLKPVMPALAAR 506


>gi|329898088|ref|ZP_08272297.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328920960|gb|EGG28385.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 683

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 242/544 (44%), Gaps = 48/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  ++ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I   
Sbjct: 4   QQPRRILVTSALPYANGPLHLGHMLEQIQTDIWVRFQQSQGNECYYICADDAHGTAIMLK 63

Query: 62  AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRT--TEKRH---------HDTCRIL 109
           AQ  G+T +  ++Q   ++ RD    L +++D F  T   E R+          D+ +I+
Sbjct: 64  AQALGITPEQLIEQVREQHERDSRGFL-VNFDHFYSTHSDENRYWSERIYGALRDSGQIV 122

Query: 110 WKKISDKGDIYKGCY-------SGWYSLRDEAYYNDDEVYKGA--------DGQYYNAQH 154
            + I    D  KG +             +    Y D+    GA        D     +  
Sbjct: 123 KRNIVQAFDPEKGLFLADRFIKGTCPKCKTSDQYGDNCESCGATYTPNDLIDPVSALSGA 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            PVQ  E E YF  L+   + L  +  S     L  +  N++  ++ +GL+   +SR   
Sbjct: 183 KPVQ-KESEHYFLDLAQSSELLTDWINSGR---LQSQVANKLREWLDAGLQGWDISRDAP 238

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADL-HVIGKDIL 268
            +G +IPD P    YVW+DA   Y+ +       +      FW      +L H IGKDI+
Sbjct: 239 YFGFEIPDAPGKYFYVWLDAPIGYIASFDNFSKQNNLDFESFWFDGKATELYHFIGKDII 298

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L +A L  P  +++HGF+   G K+SKS G  I+    +  +  + LRY+
Sbjct: 299 NFHGLFWPAMLNAAGLRAPSAIYAHGFLTVNGTKMSKSRGTFINASNYLSHLAPEYLRYY 358

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    D    + +   +RVN+D+   I N+ SR    + K +D  +    A  +  
Sbjct: 359 FAAKLGPSVDDIDLNLEDFVQRVNSDVVGKIVNIASRCAGFLKKRFDNTL----AAEQEA 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
             +LS      + I  + + +  +RA+ +VI+L  +V+++ D ++PW L K   + A   
Sbjct: 415 PELLSDLLDARRSIAAHFEGRDYNRAIREVIALADKVNQFIDEKQPWVLAKDEANNAQVH 474

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V    V+  R L   L   +P++A K  + L   +    F +L+  L P     + F P
Sbjct: 475 RVCSDGVQAFRILVSYLAPVLPEMATKSENFL---NTQLTFSNLESGLLPAGHQLEPFSP 531

Query: 506 IFPR 509
           +  R
Sbjct: 532 LMQR 535


>gi|76788744|ref|YP_327830.1| methionyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123731253|sp|Q3KMZ0|SYM_CHLTA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76167274|gb|AAX50282.1| methionyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 550

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 234/516 (45%), Gaps = 52/516 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL+       F+  I  R  + +FV   ++ L     T 
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLA-------FVQGIYLRPHIRNFVTDYIEHLRPRAVTR 232

Query: 215 D--WGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIG 264
           D  WGI +PD    + YVW DA   Y++ T      + +P+  K KFW  D       IG
Sbjct: 233 DLSWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIG 291

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD   FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +
Sbjct: 292 KDNTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSL 351

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P  
Sbjct: 352 DKLRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-Q 410

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNP 441
             + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N 
Sbjct: 411 LEQKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNW 470

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +R   +L+      + LA++    +P+ A KI +++
Sbjct: 471 NRVRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|296435548|gb|ADH17722.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437408|gb|ADH19569.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297139907|gb|ADH96665.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 550

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKELRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + +P+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|145299044|ref|YP_001141885.1| methionyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851816|gb|ABO90137.1| methionyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 677

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 222/502 (44%), Gaps = 43/502 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  G
Sbjct: 8   MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFICADDAHGTPIMLKAQQMG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S+  +      +IS+D++  T    + +   +++ ++ D G I     + 
Sbjct: 68  ITPEEMIAAVSKEHQTDFAGFNISFDNYHSTHSDENRELAELIYGRLKDGGFIKGRTITQ 127

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------- 161
            +   +++ +  D   KG      +  QY          ++P + ++             
Sbjct: 128 LFD-PEKSMFLPDRFVKGTCPKCKSPEQYGDNLRQLRCHYSPTELIDPKSAVSGATPVMK 186

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E +FF L  ++  L  +        +  E  N++  + +SGL+   ++R    +G +I
Sbjct: 187 DSEHFFFDLPQFETWLAGWVRG--SGAIQEEMANKMQEWFESGLQQWDITRDAPYFGFEI 244

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAI 273
           P  P    YVW+DA   Y+ +   L N  G      +W AD      H IGKDI  FH +
Sbjct: 245 PGAPGKYFYVWLDAPIGYMASFKNLCNKRGDIDFDSYWKADSEAELYHFIGKDIAYFHCL 304

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WP+ L  A    P KV  HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 305 FWPSMLEGAGFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 364

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + D    RVNAD+ N + NL SR+   I K +DG +    A T ++  + +
Sbjct: 365 NSRIDDLDLNLDDFVARVNADVVNKLVNLASRNAGFIAKRFDGKL----AATCAEPELYA 420

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
             +     I E  + +   RA+ ++++L  + +RY D + PW L K     A    V  V
Sbjct: 421 EFANASASISEAYEAREFSRAIREIMALADKANRYVDEKAPWVLAKQEGADAELQAVCSV 480

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            + + R L   L+  +P LA +
Sbjct: 481 GINLFRVLMAYLKPVMPLLAER 502


>gi|299771390|ref|YP_003733416.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701478|gb|ADI92043.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 688

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 238/543 (43%), Gaps = 63/543 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G++  +   +    + RD  D   + +D +  T    +      ++ K  + G+I     
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME----- 161
           +  +   ++  +  D   KG      ++ QY          YNA    NP   +      
Sbjct: 122 TQLFD-PEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPV 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 181 EKSSDHYFFKLPNFAEYLQKW--TRDEGRLPVSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTT-TGYLD--NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLDGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A  E  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAECAEPELVQS 418

Query: 390 ILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            +     +    E RE         A+ ++++L    ++Y D +KPW L K         
Sbjct: 419 FIDAGDSIASAYEARE------FSLAIREIMALADRANQYIDEKKPWALAKQEGQEQQVL 472

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQR 492
            V  V + + RQLA+ L   +P LA ++   L              V+ E   FQ L QR
Sbjct: 473 DVCSVGINLFRQLAVYLAPVLPTLAEQVQGFLKLESFNFESRKQILVSHEIAQFQPLMQR 532

Query: 493 LKP 495
           + P
Sbjct: 533 VDP 535


>gi|237804381|ref|YP_002888535.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310833|ref|ZP_05353403.1| methionyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317133|ref|ZP_05358379.1| methionyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|231272681|emb|CAX09584.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436472|gb|ADH18642.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 550

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + +P+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|256820661|ref|YP_003141940.1| methionyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582244|gb|ACU93379.1| methionyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 688

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 227/510 (44%), Gaps = 47/510 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+  G 
Sbjct: 7   ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAKKEGT 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  +D+     +       IS+D++ RT+   HH T    +KK+ ++GD  +      
Sbjct: 67  TPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEISEQL 126

Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y      +  D  V     K  + + Y  Q       E  G     +   D   S   S 
Sbjct: 127 YDEEAHQFLADRFVIGTCPKCGNPEAYGDQ------CERCGSSLNATDLIDPKSSITGSK 180

Query: 184 P------EFILPIERRNE-----------------VISFVKSGLKDLSLSR---KTFDWG 217
           P       + LP+ R  E                 V   VKS L D    R   +  DWG
Sbjct: 181 PTLKATKHWFLPLNRYQEFLEKWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRDLDWG 240

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + F
Sbjct: 241 IPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDSDTQLVHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +G K+S S    +   E +++     D LRY
Sbjct: 301 HCIIFPAMLKAEGSFILPANVPANEFLNLEGNKLSTSKNWAVWLHEYLQDFPNQQDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN ++R   +  K Y+G++P    +   D
Sbjct: 361 VLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVVPQADTYNNVD 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              L   + +  +I ++++      A  +++++    ++Y   ++PW+L KT+P+R  TV
Sbjct: 421 NETLRQITELTDKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTV 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y+ +++   LA+  + F+P  + K+  +L
Sbjct: 481 MYIALQIATALAVASEPFLPFTSEKLKRML 510


>gi|229118509|ref|ZP_04247863.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228665079|gb|EEL20567.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 544

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 235/513 (45%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT     D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVVEIADKYHEEFERCFHSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQVKRDVEIAKQ--TGAWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K YDG++P      E  E I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGVVPKGTIHVELKEKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 +   + E+++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYINVGESIEQTKFKVALETLFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|327401646|ref|YP_004342485.1| methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317154|gb|AEA47770.1| Methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 665

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 228/502 (45%), Gaps = 53/502 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N + HIGH    + ADV  R+ ++ G DV+F  G+D HG  I   A+  G++
Sbjct: 8   VTCGLPYANGKAHIGHLRTYVPADVYVRYLKMLGEDVIFICGSDCHGTPIVVNAEKEGIS 67

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +  VD+   +F+ +   +DI +D F RT  + HH   +   KK+ + G I+       Y
Sbjct: 68  PRELVDRYHDHFQKVFKAIDIEFDFFGRTDSEYHHIRTQEFVKKLIENGYIFPKEIELAY 127

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH-NPVQWME--------------EE 163
             + + +  D            V +G +      +H  P +  E              ++
Sbjct: 128 CPKCQRFLPDRYVEGICPYCGSVARGDECDQGCGRHLEPGEIKEPKCKICGSNAVFRKQK 187

Query: 164 GYFFRLSAYQDKLLSYYES--HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            YFFRL+A++D LL Y E+    E  L     N    +VK  LKD  ++R   +WG+K P
Sbjct: 188 HYFFRLTAFKDFLLDYLENLRGTENAL-----NYAKQWVKGELKDWCITR-NLEWGVKFP 241

Query: 222 DDPQYIMYVWIDALTNYLTTT-----GYLDNPD---GSKAKFWPADLHVIGKDILRFHAI 273
            +   ++YVW+DA   Y++ T     G  D  D     KA+     +H IG DI+  H I
Sbjct: 242 GE-DLVVYVWVDAPIGYISFTEKACEGRCDWKDIWINGKAEI----IHFIGLDIVYHHCI 296

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVR 331
           +WPA L  A   LP  V + G +  +G+  SKS G V+   +   + G   D LRY++V 
Sbjct: 297 FWPAMLKGAGYALPNAVVASGMVKVEGKTFSKSRGYVVWVEDDYLKAGFNTDYLRYYIVN 356

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  +D  +  +  + +VN +L   +GN + R +    K++  +       +E DE I+
Sbjct: 357 YTSHQRDLNFSWEVFRDKVNNELIATLGNFLYRVMHFAWKNFGSV-----EVSEVDEEIM 411

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +    +I   ++      A    + L    + YF   KPWEL K N +    V+   
Sbjct: 412 QKIAETKDKIVRALEEWEFKVASDAFMELAGFGNVYFQNVKPWELIKENKEECIKVIANC 471

Query: 452 VEVIRQLAILLQAFVPKLANKI 473
           +++ + L I     +P+   K+
Sbjct: 472 LQLAKALIIFSYPVMPRTMEKM 493


>gi|260909882|ref|ZP_05916571.1| methionine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635986|gb|EEX53987.1| methionine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 750

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 241/539 (44%), Gaps = 51/539 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV+F  G+DEHG  I  
Sbjct: 73  KQYKRTTITAALPYANGGVHIGHLAGVYVPADIYARYMRLKKEDVVFIGGSDEHGVPITI 132

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +  VD+     +   +   IS+D + RTT   HH      +KK+ + G + 
Sbjct: 133 RARKEGVSPQDVVDRFHAMIKKSFEDFGISFDIYSRTTSPTHHQLASDFFKKLYEDGKLL 192

Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGADGQYYNAQH-------- 154
           +     +Y                     +E  Y D     G D       H        
Sbjct: 193 EKETEQYYDEEAHQFLADRYITGECPHCHNEGAYGDQCEKCGRDLSPTELLHPRSTISGS 252

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   + + ++  L  YQD L  +  E H E+      R  V    KS L D+ L  + 
Sbjct: 253 QPVL-KKTKNWYLPLDKYQDWLKEWILEGHKEW------RPNVYGQCKSWL-DIDLQPRA 304

Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVI 263
                DWGI +P +     ++YVW DA   Y++ T  L  PD +  K+W       +H I
Sbjct: 305 MTRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-TWEKWWKDPETRLVHFI 362

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +P  L +     LP+ V S+ F+  + +KIS S    +   E +E+   
Sbjct: 363 GKDNIVFHCIVFPVMLKAHGGYILPENVPSNEFLNLEDDKISTSKNWAVWLHEYLEDFPG 422

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     ++R N +L    GN V+R++ +  K +DG +P  
Sbjct: 423 KQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFDGRVPAC 482

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   + D+  L     V +++   +       A  + + L    +RY    +PW++ KT+
Sbjct: 483 GELNDVDKQALDEFKDVKEKVESLLDTYKFRDAQKEAMVLARIGNRYITECEPWKVWKTD 542

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           P R  T+LY++++++  LAI  + F+P  + K+  +L +   +       + LKPG  L
Sbjct: 543 PKRVETILYISLQLVANLAIAFEPFLPFSSAKLRRLLNMEGVDWNALGNTEILKPGHQL 601


>gi|223558006|gb|ACM91012.1| methionyl-tRNA synthetase [uncultured bacterium URE4]
          Length = 724

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 238/516 (46%), Gaps = 41/516 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++ A+ Y N   HIGH A   I  D+  R+ RL G DV+F  G+DEHG  I 
Sbjct: 1   MNDHKRTLVTCALPYANGPVHIGHLAGAYIPGDIYVRYLRLRGEDVVFVCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VDQ  +  +D    L I++D + RTT   H  T    ++K+ D    
Sbjct: 61  IKARAQGVTPQDIVDQYHQVMKDAFTGLGINFDIYSRTTSDVHDKTASEFFRKLYDNDKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWMEEEG---- 164
                  +Y    + +  D  +       G  G Y        +  +P + ++       
Sbjct: 121 ITKETEQYYDEEAKTFLADRYIVGTCPKCGNPGAYGDQCEKCGSTLSPEELIDPRSALSG 180

Query: 165 ----------YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                     ++  L  Y+  L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 181 STPKKVKTKHWYLPLDQYEPWLRDWILEQHKEWKTNV--YGQCKSWLDGGLQPRAVSRD- 237

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
            DWG+ +P +     ++YVW DA   Y++ T  L  P+ S  K+W       +H IGKD 
Sbjct: 238 LDWGVPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPE-SWEKWWKDPETRLVHFIGKDN 295

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E  E+     D 
Sbjct: 296 IVFHCIVFPSMLKAYGDFVLPENVPANEFLNLEGDKISTSRNWAVWVHEYEEQFPGQEDV 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     ++R N++L    GN V+R+V +  K +DG++P      
Sbjct: 356 LRYVLTANAPETKDNDFTWKDFQQRNNSELVAVFGNFVNRAVVLTHKYFDGVVPENRKPE 415

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D   L+      + + + ++      AL + +++    ++Y    +PW++ KT+ DR 
Sbjct: 416 PIDAETLASIVPCKEALEKYVETFHFREALKEAMNIARIGNKYISDMEPWKVAKTDMDRT 475

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +++LY  +++   LAI  + F P  A K+ DIL V 
Sbjct: 476 ASILYTCLQICADLAIAFEPFTPFSAGKLRDILRVG 511


>gi|300778746|ref|ZP_07088604.1| methionine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504256|gb|EFK35396.1| methionine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 679

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 237/508 (46%), Gaps = 43/508 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   I ADV ARF R  G DV F  G+DEHG  I   A+  GV
Sbjct: 7   ITAALPYANGPVHIGHLAGVYIPADVYARFQRRLGKDVAFICGSDEHGIPITIRAKKEGV 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     +     L IS+D++ RTT K+H++T +  +K + +KG   +     +
Sbjct: 67  TPQDIVDKYHGIIKKSFSDLGISFDEYSRTTSKKHYETSQDFFKVLYEKGKFTEEVSEQY 126

Query: 128 YSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM--------EE 162
           +  +   +  D                 D+  K       +   NP   +        E 
Sbjct: 127 FDEQAGEFLADRYIVGTCPNCGNENAYGDQCEKCGTTLSPSELINPKSMLSGNVPILKET 186

Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + ++  L+ Y+D L  +  E H +   P     +V S++  GLK  +++R   +WG+ +P
Sbjct: 187 KNWYLPLNEYEDFLNQWIIEGHKDDWKP-NVYGQVKSWLNDGLKPRAMTRD-LNWGVPVP 244

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274
             +    ++YVW DA   Y++ T      +G   K +W ++    +H IGKD + FH I 
Sbjct: 245 LPNAEGKVLYVWFDAPIGYISFTKEWAEKNGKDWKDYWQSEDSDLVHFIGKDNIVFHCII 304

Query: 275 WPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVR 331
           +P+ + +  +  +P  V +  F+  + +KIS S    +   E +E+     D LRY L+ 
Sbjct: 305 FPSMMKAHGDYIMPANVPAFEFLNLENDKISTSRNWAVWAHEYVEDFPGQQDVLRYVLLS 364

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     + + N++LAN  GN ++R   +I K+++G +P         E I 
Sbjct: 365 SAPETKDNNFTWKDFQTKNNSELANIFGNFINRVAVLINKNFEGKVPKGDVNAPELEEI- 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               +   EIR  ++N     AL   ++L    ++Y   ++PW+  K + ++    L++ 
Sbjct: 424 ---GKRAVEIRNFLENYEFRNALTAFMNLARFGNQYLQNEEPWKTVKNDLEKTKNTLFIG 480

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++   LA L + F+P  A K+++I  V
Sbjct: 481 AQISVALANLAEPFLPFTAQKLYEIFNV 508


>gi|166154253|ref|YP_001654371.1| methionyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155128|ref|YP_001653383.1| methionyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335502|ref|ZP_07223746.1| methionyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|229470712|sp|B0B9D9|SYM_CHLT2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229470713|sp|B0BB18|SYM_CHLTB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|165930241|emb|CAP03726.1| methionyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931116|emb|CAP06680.1| methionyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 550

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNAYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + +P+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|169634155|ref|YP_001707891.1| methionyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169152947|emb|CAP01992.1| methionyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 687

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 241/546 (44%), Gaps = 69/546 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+  
Sbjct: 3   KILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDF---------IRTTEK--RHHDTCRILWKKI 113
           G++  +   +    + RD  D   + +D +          R+T+   ++ +   I  + +
Sbjct: 63  GISPEEQIANVQKEHIRDF-DGFGVHFDHYDSTHSDVNKARSTDIYIKNREAGNIAVRPV 121

Query: 114 SDKGDIYKGCY-------SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME-- 161
           +   D  KG +             + E  Y D  EV     G  YNA    NP   +   
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGA 177

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + YFF+L  + + L  +  +  E  LP+   N++  + ++GL D  +SR    
Sbjct: 178 TPVEKSSDHYFFKLPNFAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPY 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
           +G +IPD P    YVW+DA   Y+++   Y+    PD +   FW  D      H IGKDI
Sbjct: 236 FGFEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY
Sbjct: 296 VYFHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRY 355

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++ 
Sbjct: 356 YFASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDL 415

Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            +S +     +    E RE         A+ ++++L    ++Y D +KPW L K      
Sbjct: 416 VQSFIDAGDSIAAAYEARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQ 469

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSL 489
               V  V + + RQLA+ L   +  LA ++ D L              V+ E   FQ L
Sbjct: 470 QVLDVCSVGINLFRQLAVYLAPVLSTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPL 529

Query: 490 DQRLKP 495
            QR+ P
Sbjct: 530 MQRVDP 535


>gi|319944052|ref|ZP_08018332.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
 gi|319742813|gb|EFV95220.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
          Length = 789

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 229/522 (43%), Gaps = 61/522 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+L+I+TA+ Y N   HIGH  E I AD+  RF R+ G DVLF    D HG  I   AQ 
Sbjct: 69  ERLFITTALPYANGSFHIGHIMEYIQADIWVRFQRMLGKDVLFVGADDAHGAPIMLKAQA 128

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   IS+D +  T    +    + +++++   G +     
Sbjct: 129 EGITPEELVARIAAERPYYLNGYHISFDHWHSTHSPENTALSQEIYRRLKAAGLVATRTI 188

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWM------ 160
             ++    E +  D  + KG      A  QY +A              NP   +      
Sbjct: 189 EQFFDPVKEMFLPDRYI-KGECPNCHAKDQYGDACEVCSKVYAPTDLINPYSTLTGSTPV 247

Query: 161 --EEEGYFFRLS-----AYQDKLLSYYESHPEFIL---------PIERRNEVISFVKSGL 204
               E YFF LS      +    L+     PE              +          + L
Sbjct: 248 IRSSEHYFFSLSDPRCRQFLHDWLAQGRLQPEVANKAREWLGSDATDGEAAEGEGAGNPL 307

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT------------GYLDNPDGSK 252
            D  +SR    +GI IPD P    YVW+DA   YL +              ++D   G  
Sbjct: 308 ADWDISRDEPYFGIPIPDAPGKYFYVWLDAPVGYLASLKALCEKRGLDFDAFIDPQAGQD 367

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +     +H IGKDI+ FH ++WPA L  A +  P  +F HGF+   GEK+SKS G  + 
Sbjct: 368 PQRPYRQVHFIGKDIIYFHTLFWPAMLKFAGMHTPDNIFVHGFLTISGEKMSKSRGTGLS 427

Query: 313 PIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           P + + E+G++   LRY+L  ++    +D  ++ +    RVN+DL   + N+ SRS   I
Sbjct: 428 PKKYL-ELGMNPEWLRYYLAAKLNSRVEDVDFNAEDFVARVNSDLVGKLVNIASRSAGFI 486

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           LK +DG +      T +  +     +  L E+ E        +A+  +++L   V+++ D
Sbjct: 487 LKRFDGRLAAASPATLAAFAESWPGADTLAELYEQRDYA---KAMRAIMALADRVNQFVD 543

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+KPWEL K +P + + +  V  + +R  A L+    P L +
Sbjct: 544 AEKPWELAK-DPAQTAKLHEVCSDALRGFAQLIALLAPVLPD 584


>gi|228910874|ref|ZP_04074683.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228848825|gb|EEM93670.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 544

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G DVL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEDVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRDVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW +D    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDHEFWNSDAQTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K YDG++P      E  + +
Sbjct: 358 INAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPKGTINVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +       +Y 
Sbjct: 418 ----EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDERQPWKEREDDSVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CIYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|212550457|ref|YP_002308774.1| methionyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548695|dbj|BAG83363.1| methionyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 557

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 240/510 (47%), Gaps = 43/510 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+  ++  I++A+ Y N   HIGH A   I AD+ AR+ RL G +VLF  G+DEHG  IA
Sbjct: 1   MENYKRFLITSALPYANGPVHIGHLAGVYIPADIYARYLRLRGEEVLFIGGSDEHGVPIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G T +  VD+     +   +   I++D + RT+   HH T    ++ + DKG +
Sbjct: 61  LKAREEGSTPQKVVDRYHHLIKKSFEDFGITFDIYSRTSSLIHHQTASEFFRHLYDKGKL 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWM----------- 160
            +     +Y    + +  D  +        YK A G    +    +  M           
Sbjct: 121 VEKITGQYYDTHAKLFLADRYISGTCYLCGYKQAYGDQCESCGAFINAMDLLDPKSVITN 180

Query: 161 ------EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E + ++  L  Y + L  +  E H E+   +    +  S++++GL   ++SR  
Sbjct: 181 TLPKVRETKHWYLPLDEYTEWLKKWILEEHREWKTNV--VGQCKSWLETGLFHRAVSRD- 237

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD--LHVIGKDI 267
            DWGI +P       ++YVW DA   Y++ T  ++       K+W  P+   +H IGKD 
Sbjct: 238 LDWGIPVPIKGAEGKVLYVWFDAPIGYISNT--IEYSPNDWKKWWKDPSTKLVHFIGKDN 295

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P  L +     LP  V ++ F+  +GEKIS S    +   E +EE     D 
Sbjct: 296 IVFHCIIFPVMLKAHEGYILPDNVPANEFLNLEGEKISTSRNWAVWLHEYLEEFPGQQDV 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L+      KDG +     + R N +L   +GN V+R + +  K ++G +P  G   
Sbjct: 356 LRYVLIANAPETKDGDFTWRDFQARNNNELVAILGNFVNRVLVLTHKYFEGKVPKLGELR 415

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           + D ++L    R  + I EN   Q   R AL + +SLV   ++Y    + W+  + +  R
Sbjct: 416 DYDRNVLEKFFRS-KIILENYLGQYHFRDALKEAMSLVRIGNKYLTDTEAWKTARKDIFR 474

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +TVL V +++I  L I+ + F+P   +KI
Sbjct: 475 TATVLNVALQMIVNLTIVFEPFLPFTVDKI 504


>gi|325299462|ref|YP_004259379.1| Methionyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319015|gb|ADY36906.1| Methionyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 680

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 244/512 (47%), Gaps = 41/512 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +VLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEEVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +  VD+     RD      IS+D + RTT K HHDT    ++ + DKG+  
Sbjct: 63  RAKKEGCTPQDIVDRYHTLIRDSFKEFGISFDVYGRTTSKVHHDTASAFFRTLYDKGEFV 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160
           +     +Y    + +  D  +        A+G Y        +  +P + +         
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L+ ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 QPVMKETKHWYLPLNKHEAWLRQWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
           DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IGKD +
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLVHFIGKDNI 297

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E +++     D L
Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G   +
Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFEGKVPACGELND 417

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D + L   + V  ++ + +       A  + ++L    ++Y    +PW+L KT+ DR +
Sbjct: 418 YDRATLQEFADVKAQVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVA 477

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+L + ++++  L+I  + F+P  + K+  +L
Sbjct: 478 TILNIALQLVANLSIAFEPFLPFSSEKLRKML 509


>gi|54298874|ref|YP_125243.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|68565968|sp|Q5X105|SYM_LEGPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53752659|emb|CAH14094.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 670

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 241/547 (44%), Gaps = 53/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQVLATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +SR   
Sbjct: 181 SPVEKESEHYFFDLPLYEELLKDWTRKGH----LQAEVTNKLSEWFEAGLKQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+
Sbjct: 237 YFGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIV 296

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+
Sbjct: 297 YFHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYY 356

Query: 329 LVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
              ++  G+  D   + D    RVNADL   + N+ SR    I K +D  + +     + 
Sbjct: 357 FAAKLN-GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKL 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
              +LS    V+    +   ++   RA+ Q++    +V++Y DA KPW L K  +  +  
Sbjct: 416 HNDLLSARESVI----DAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEV 471

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--T 502
             +  + + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H+  T
Sbjct: 472 HAICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINT 525

Query: 503 FDPIFPR 509
           F P+  R
Sbjct: 526 FKPLMVR 532


>gi|192359290|ref|YP_001981505.1| methionyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685455|gb|ACE83133.1| methionyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 679

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 228/499 (45%), Gaps = 44/499 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G+D  +    D HG  I  KA Q 
Sbjct: 11  KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGVDCTYVCADDAHGTAIMLKAEQL 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                +   +  + +  D A   +I +D++  T    + +   ++++++   G I     
Sbjct: 71  GHSPEQQIANVKAEHEADFA-AFNIGFDNYHSTHSDENRELSTLIYERLKANGHIATRGI 129

Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160
           +  Y    + +  D            E   G + +   A ++P+  +             
Sbjct: 130 TQAYDPEKQLFLADRYIKGTCPKCKSEDQYGDNCEKCGATYSPMDLINPKSAISGATPVA 189

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  +     L  E  N++  ++ +GL++  +SR    +G +
Sbjct: 190 RESEHFFFTLPAFSDFLKAWTRAGH---LQDEVANKMAEWLDAGLQEWDISRDAPYFGFE 246

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHAI 273
           IP +P    YVW+DA   Y+ +   L +  G    ++W  D      H IGKDI+ FHA+
Sbjct: 247 IPGEPGKYFYVWLDAPIGYIASLKNLLDKQGKDWYEYWKPDSTTEVYHFIGKDIVNFHAL 306

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L SANL  P K+  HGF+   G K+SKS G  I+    +  +  + LRY+   ++
Sbjct: 307 FWPAMLHSANLRTPSKICVHGFLTVNGTKMSKSRGTFINARTYLNYLNPEYLRYYFAAKL 366

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVN+DL   + N+ SR+   I  +  G++    A   +D ++  
Sbjct: 367 TSNVDDIDLNLEDFIQRVNSDLVGKVVNIASRTAKFI-TNAGGVL----ASNLADPALWQ 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451
                 + I  + +++   +A+ ++++L    + Y   Q+PW+L K     A T +  T 
Sbjct: 422 QFVDAGETIASHYESRDYSKAMREIMALADAANEYIATQEPWKLAKQAGAEAQTQVVCTL 481

Query: 452 -VEVIRQLAILLQAFVPKL 469
            + + R +   L+  VP L
Sbjct: 482 GINMFRAILTYLKPVVPAL 500


>gi|149280091|ref|ZP_01886215.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149229105|gb|EDM34500.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 716

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 241/529 (45%), Gaps = 67/529 (12%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   HIGH A   + AD   R+ R +  DV F  G+DE+G  I   A+  GV
Sbjct: 25  VTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVPITLKAKKEGV 84

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+      D      +S+D + RT+   HH T    ++ + +KG   +     +
Sbjct: 85  TPQEIVDKYHEIIGDSFKEFGVSFDIYHRTSSLMHHQTASDFFENLYEKGVFTEEVTEQY 144

Query: 128 YSLRDEAYYNDDEVYK-----GADGQYYNAQHN---------------------PVQWME 161
           Y  + + +  D  +       G +  Y +   N                     PV+  E
Sbjct: 145 YDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTLSGEKPVR-KE 203

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWGI 218
            + +F  L  Y+D+L +Y E H E+     R N   +  S++ +GL+  +++R   DWG+
Sbjct: 204 TKNWFLPLDKYEDQLRTYIEGHKEW-----RPNVYGQCQSWLNAGLQPRAMTRD-LDWGV 257

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTT------GYLD--NPD-------------GSKAKF 255
           ++P  D    ++YVW DA   Y++ T        LD  NP              G+   +
Sbjct: 258 RVPVKDAEGKVLYVWFDAPIGYISATKELFEYARLDVWNPKSEEYYINKNTLTKGNWEDY 317

Query: 256 WPAD----LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           W  +    +H IGKD + FH + +PA L++  +  L   V ++ F+  +G+KIS S    
Sbjct: 318 WKDENTKLVHFIGKDNIVFHCVIFPAMLMAHGDYTLADNVPANEFLNLEGQKISTSKNWA 377

Query: 311 IDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +   E + E     D LRY L       KD  +     + R N +L   +GN ++R V +
Sbjct: 378 VWLNEYLTEFKGQQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFINRVVVL 437

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K + G +P        D+ ++   +     I  +++N     AL +V+++    ++Y 
Sbjct: 438 THKYFGGKVPMLMEVKPEDQQVIDELAEYPARISASIENYRFREALMEVMNVARLGNKYL 497

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +PW++ KT+ DR  T+L +++++   L IL++ F+P  A+K+  +L
Sbjct: 498 ADMEPWKVIKTDEDRVRTILNISLQIAANLEILIEPFLPFTADKLMKML 546


>gi|322369925|ref|ZP_08044487.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550261|gb|EFW91913.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 692

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 225/511 (44%), Gaps = 50/511 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            E   ++  + Y N + HIGH    +  DV +R     G    F +G+D HG  +A  A+
Sbjct: 9   EEPAVVTCGLPYANGELHIGHLRTYVGGDVYSRALETLGQQTAFVSGSDMHGTPVAVNAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY-KG 122
             GV+ + F  ++   +       DI +D++  T ++ + +  + + +K+ ++G IY K 
Sbjct: 69  KEGVSPREFALRHHDKYEATFPKFDIEFDNYGHTDDETNTELTQEIVRKLDEEGYIYEKE 128

Query: 123 CYSGWYSLRDE---------------AYYNDDEVYKGADGQYYNAQH----------NPV 157
               W  + D+               A+   DE  +G  G++               NP 
Sbjct: 129 IKVAWDPIEDDPLPDRYVEGTCPYCGAHARGDECDEGC-GRHLEPGEIEDPTSIRTGNPA 187

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           ++ E    FFR+S  Q+ L  + +           +N+   +++  L+D  +SR   DWG
Sbjct: 188 EYRERTHKFFRVSELQEYLQGFIDR---LEGTSNAKNQPREWIEGELQDWCISRD-MDWG 243

Query: 218 IKIPDD------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIG 264
           I  P D         ++YVW+DA   Y+ +T       G+    W          +H+IG
Sbjct: 244 IDYPGDEGDEASEDLVLYVWVDAPIEYIASTKQYTERVGADTYDWEEPWKDAGEIVHIIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           +DI++ H ++WPA L  A    P+ V + GF+   G+  S S    +   + ++E    D
Sbjct: 304 RDIIQHHTVFWPAMLHVAEYNEPRAVMASGFVNLNGKGFSTSRNRAVWADDYLDEGFAPD 363

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY+L       +D  +  D  ++RVN +L   +GN V RS+    ++YDG    P A 
Sbjct: 364 LLRYYLATNGGFQQDVDFSWDRFQERVNGELVGTVGNFVYRSLLFAARNYDG---APDA- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E+ + +       + E    + +  I        +L +  + Y    +PW+L   +P+R
Sbjct: 420 -ETSDEVRERIEDAIDEFTAAVNDYSIKDLGDAATALAAFGNEYIQRNEPWKLTDEDPER 478

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A  V+Y  V++ + LA+L +  +P  A  ++
Sbjct: 479 AEQVIYDCVQLSKALAVLFEPILPGKAETLW 509


>gi|307825405|ref|ZP_07655624.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733580|gb|EFO04438.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 672

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 231/505 (45%), Gaps = 42/505 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I  
Sbjct: 1   MSDR-KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKQRGNLCYYVCADDTHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  + Q  +          +++D++  T  + +     ++++++ D G I 
Sbjct: 60  RADREGITPEQLIAQVGKEHLADFTEFSVAFDNYHSTHSEENKALSSLVYERLRDAGHIS 119

Query: 121 KGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNA------QHNPVQWM--------- 160
               +  +      + +D     E  K GA  QY +        + P +           
Sbjct: 120 SRTITQAFDPVKNMFLSDRFIKGECPKCGAADQYGDGCEVCGTTYAPTELKNAVSAISGA 179

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                +   YFF L+ + D L  +  +H   + P E  N++  ++  GL+   +SR    
Sbjct: 180 KPVDKDSVHYFFDLANFSDMLREW--THAGHLQP-EVSNKLAEWLDGGLQQWDISRDAPY 236

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILR 269
           +G +IPD P    YVW+DA   Y+ +   L +  G    +FW     A+L H IGKDI+ 
Sbjct: 237 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDKQGLDFNEFWSKNSDAELYHFIGKDIIY 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A+   P  +F+HGF+   GEK+SKS G  I     ++ +  + LRY+ 
Sbjct: 297 FHALFWPAMLSGAHFRTPSAIFAHGFLTVNGEKMSKSRGTFIKARTYLDHLNPEYLRYYF 356

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++ G  D   + D   +RVN+DL   + N+ SR    I K +D  +        S++
Sbjct: 357 AAKLSAGVDDLDLNFDDFSQRVNSDLVGKVVNIASRCSGFIAKRFDNRLSEQC----SEQ 412

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
           ++         +I E  + +   +A+ ++++L  + ++Y D +KPW + K          
Sbjct: 413 ALFHEFVTANTQIAELYEAREFGKAMREIMALADKANQYIDEKKPWLIAKEEGKDQELHE 472

Query: 447 VLYVTVEVIRQLAILLQAFVPKLAN 471
           V  + + + R LA+ L+  +P LA 
Sbjct: 473 VCTMGLNLFRLLAVYLKPVIPVLAG 497


>gi|227494721|ref|ZP_03925037.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831721|gb|EEH64104.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 564

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 219/486 (45%), Gaps = 56/486 (11%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DVL  +GTDEHG  I  AA   G+T +   D+N+R   +    L +SYD F RTT 
Sbjct: 1   MQGHDVLMVSGTDEHGTPILVAADGKGITPRQLADENNRLIVEDLVQLGLSYDLFTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY--------KGADGQYYN 151
             H+   + +++ + D G +      G  S        D  +          GA G   +
Sbjct: 61  GNHYQVVQAMFEVVRDNGYMLVQTTHGAISPSTGRTLPDRYIEGTCPICGDPGARGDQCD 120

Query: 152 AQHN---------PV--------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +  N         PV        +++E + YF  L      L ++ +   +       R 
Sbjct: 121 SCGNQLDPTDLINPVSRINGETPKFIETDHYFLDLPGLAGALSAWLDDREK---SGTWRP 177

Query: 195 EVISFVKSGLKDLSLSRKT--FDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
            VI F ++ L+D+     T   DWGI +P   D P   +YVW DA+  YL+ +       
Sbjct: 178 NVIKFSQNFLEDIRPRAMTRDIDWGIPVPGWEDQPSKRLYVWFDAVVGYLSASIEWARRS 237

Query: 250 GSKA---KFW--PADL--HVIGKDILRFHAIYWPAFLLS--------------ANLPLPK 288
           G      K+W  P  L  + +GKD + FH+  WPA +L                 L LP 
Sbjct: 238 GDPEAWRKWWNDPEALSYYFMGKDNIVFHSQIWPAEILGYNGGGDKGGEPGPFGQLNLPT 297

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +V S  F+  +G K + S G VI   +++     DALRYF+        D  +      +
Sbjct: 298 EVVSSEFLTMEGRKFASSRGIVIYVRDMLSRYQADALRYFISAAGPESSDADFTWAEFVR 357

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           R N++L  G GNLV+R+ SMI K + G IP PG   E D+++L+  +    E+ + +   
Sbjct: 358 RTNSELVAGWGNLVNRAASMINKRF-GEIPQPGQLEEIDQALLNQLADGFAEVGQLIGTH 416

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
               A+A V+ LV E ++Y    +P++LK  +  +R +T+L+   + +  L  ++  F+P
Sbjct: 417 RQKAAIAAVMRLVGEANKYVADTEPFKLKDPSQEERLATILWTLAQAVSDLNTMMSPFLP 476

Query: 468 KLANKI 473
             AN I
Sbjct: 477 HSANAI 482


>gi|119775184|ref|YP_927924.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|187647769|sp|A1S798|SYM_SHEAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119767684|gb|ABM00255.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 675

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 236/511 (46%), Gaps = 47/511 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  ++++D++  T    +      ++ K+ D G I   
Sbjct: 65  QLGMAPEEMIAQVNVEHQQDFAD-FNVAFDNYHSTHSDENRALASEIYLKLRDGGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      ++ QY        A ++P + +          
Sbjct: 124 TISQLFD-PEKSMFLPDRFVKGTCPKCKSEDQYGDNCDACGATYSPTELINPRSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L A++  L ++  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKETEHFFFDLPAFEGMLKAWTRSG---ALQSEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLDN-PDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   + D   D +  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNFCDKRGDINFDEFWAKDSSAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGAGFRQPSSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +        +D+
Sbjct: 360 AAKLSARIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLA-----AVADK 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           S++         I E  + +   +A+ ++++L    + +     PW+L K +   + A  
Sbjct: 415 SLIDSFLAKQDVIAELYEAREYGKAMREIMALADVANGFVADAAPWQLVKQDDKQEEAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V    + + R L   L+  +P+LA  + D  
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAKDVEDFF 505


>gi|265752983|ref|ZP_06088552.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263236169|gb|EEZ21664.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 680

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 239/510 (46%), Gaps = 51/510 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 10  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DK +  +     +
Sbjct: 70  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 129

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 130 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 188

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217
            + ++  L  ++  L  +  E+H E+     R N   +  S++  GL+  ++SR   DWG
Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY
Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+
Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + ++++  LAI  + F+P  + K+  +L
Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509


>gi|237711556|ref|ZP_04542037.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229454251|gb|EEO59972.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 680

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 239/510 (46%), Gaps = 51/510 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 10  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DK +  +     +
Sbjct: 70  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 129

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 130 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 188

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217
            + ++  L  ++  L  +  E+H E+     R N   +  S++  GL+  ++SR   DWG
Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY
Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+
Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + ++++  LAI  + F+P  + K+  +L
Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509


>gi|255534689|ref|YP_003095060.1| methionyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340885|gb|ACU06998.1| Methionyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 677

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 236/513 (46%), Gaps = 43/513 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I+ A+ Y N   HIGH A   I ADV ARF R  G DV F  G+DEHG  I   A+
Sbjct: 3   ERKMITAALPYANGPVHIGHLAGVYIPADVYARFQRRLGRDVAFICGSDEHGIPITIRAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+     +     L IS+D++ RTT K+H++  +  +  + +KG   +  
Sbjct: 63  KEGVTPQDIVDKYHEIIKKSFADLGISFDEYSRTTSKKHYEVSQDFFATLFNKGKFAEEV 122

Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWM------ 160
              ++  +   +  D                 D+  K       +   NP   +      
Sbjct: 123 SEQYFDEQAGEFLADRYIVGTCPNCSNDNAYGDQCEKCGSTLSPSELINPKSMLSGNVPI 182

Query: 161 --EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             E + ++  L+ Y++ L  +  E H     P     +V S++  GLK  +++R   +WG
Sbjct: 183 LKETKNWYLPLNEYENFLNEWIIEGHKNDWKP-NVYGQVKSWLTDGLKSRAMTRD-LNWG 240

Query: 218 IKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRF 270
           + +P  D    ++YVW DA   Y++ T      +G   K +W  +    +H IGKD + F
Sbjct: 241 VPVPLPDAEGKVLYVWFDAPIGYISFTQEWAEKNGKDWKDYWQNENSDLVHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA + +  +  +P  V +  F+  + +KIS S    +   E +EE     D LRY
Sbjct: 301 HCIIFPAMMKAHGDYKMPTNVPAFEFLNLENDKISTSRNWAVWAHEYVEEFPGQQDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+      KD  +     + + N++L    GN ++R   +I K YDG++P         
Sbjct: 361 ALLSSAPETKDNNFTWKDFQTKNNSELVGIFGNFINRVAVLIHKYYDGIVPQ----GNEQ 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              L   S+   EI   ++      AL+ +++L    +++   ++PW+  K NP++A+  
Sbjct: 417 APELHEISKAASEIESYLERYEFRNALSSMMNLARFGNQFLQTEEPWKTIKDNPEKAANS 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           L++  ++   LA + + F+P  ++K+  +  V+
Sbjct: 477 LFIGAQIAVGLAQICEPFLPFSSDKLLKMFNVS 509


>gi|168213447|ref|ZP_02639072.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714987|gb|EDT27169.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 514

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 231/495 (46%), Gaps = 29/495 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     I  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWIAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S++ F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     +++ GL+D  L+R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   IGN  +R ++ I K+++G I       E      ++  R    +    +N  +  
Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGQIKGE----ELPLQWKNIIRRTYASVGNKFENGELKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEMFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVADENRCFQ 487
           I   L + D    F+
Sbjct: 466 IKMFLGIKDTKWSFE 480


>gi|24374161|ref|NP_718204.1| methionyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|68566007|sp|Q8EDX2|SYM_SHEON RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24348665|gb|AAN55648.1|AE015703_10 methionyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 676

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 235/507 (46%), Gaps = 47/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I++D++  T  + +      ++ K+   G I   
Sbjct: 65  QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEQSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLYGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +        +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI-----TDT 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++  V     ++I E  + +   +A+ ++++L    + +     PW++ K +   + A  
Sbjct: 415 TLTEVFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
           V    + + R L   L+  +P+LA  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|327479892|gb|AEA83202.1| methionyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 679

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 233/524 (44%), Gaps = 60/524 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L +++D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFADFL-VNFDNFHSTHSPENRELAELIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++   ++  +  D   KG      A+ QY        A + P +  +      
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF+L  ++  L  +        L     N++  ++  GL++  +SR  
Sbjct: 179 GATPVLKDSKHFFFKLPDFEAMLKEWTRGG---ALQESVANKIAEWLDGGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP----ADL-HVIGKD 266
             +G +IP +P    YVW+DA   Y+ +   L    P+ S   FW     A+L H IGKD
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IINFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLR 355

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTP- 380
           Y+   ++  G  D   + D   ++VN+DL   + N+ SR    I K  DG++    P P 
Sbjct: 356 YYYASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE 415

Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              AF  +  SI         E R+        RA+ ++++L    + +   + PW L K
Sbjct: 416 LWAAFQAAAPSIADA-----YEARD------FARAMREIMALADRANAWIADKAPWALNK 464

Query: 439 TNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               +A    +  + V + RQL I L+  +P LA      L VA
Sbjct: 465 VEGKQAEVQEICALGVNLFRQLVIFLKPVLPNLATAAEQFLNVA 508


>gi|296108530|ref|YP_003620231.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295650432|gb|ADG26279.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 664

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 238/545 (43%), Gaps = 61/545 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I   A+  G
Sbjct: 1   MLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIMLKAEQLG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +    +   +         I YD +  T    +      +++++   GDI K     
Sbjct: 61  ITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIVKKTIRQ 120

Query: 127 WYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQW--------------ME 161
           +Y    + +  D  V             G + +   A ++P                 ME
Sbjct: 121 FYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGASPVEME 180

Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +SR    +G  I
Sbjct: 181 SEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           P  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ FHA++
Sbjct: 237 PGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVYFHALF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+   ++ 
Sbjct: 297 WPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYFAAKLN 356

Query: 335 CGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            G+  D   + D    RVNADL   + N+ SR    I K +D  +        S E I  
Sbjct: 357 -GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRL--------SSELINQ 407

Query: 393 VCSRVLQEIRENMQNQLIH----RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
                L   RE + +  +     RA+ Q++    +V++Y DA KPW L K  +  +    
Sbjct: 408 KLYNDLLSAREFVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 467

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFD 504
           +  + + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H+  TF 
Sbjct: 468 ICTMGINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINTFK 521

Query: 505 PIFPR 509
           P+  R
Sbjct: 522 PLMVR 526


>gi|110803500|ref|YP_699779.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684001|gb|ABG87371.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 514

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 29/495 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + DKG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYDKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +       DE   G +    N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCQK--CCDTLDEF--GVEDGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     ++  GL+D  ++R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLDGGLRDKIVTRE-INWGIEVPVEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   +GN  +R ++ I K+++G I       +    I+    R    +    +N     
Sbjct: 350 ELVGELGNFTNRVLTFIKKNFNGEIKREELPLQWKNIII----RTYASVGNKFENGEFKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICAQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVADENRCFQ 487
           I   L + D    F+
Sbjct: 466 IKMFLGIKDTKWSFE 480


>gi|42784223|ref|NP_981470.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|68565988|sp|Q72Y44|SYM1_BACC1 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|42740154|gb|AAS44078.1| methionyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987]
          Length = 544

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 236/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRNLGFTYDCYTRTDSEHHHKTVQKVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSAPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E+  +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKVAVETAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDREAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + I
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIDVELKDKI 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKEREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I     LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFVNLLEPFLPFSSERVRNTLSIVKRN 506


>gi|296135470|ref|YP_003642712.1| methionyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795592|gb|ADG30382.1| methionyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 725

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 243/576 (42%), Gaps = 86/576 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + + +++TA+ Y N   HIGH  E I AD   RF R+ G +V F    D HG  I  
Sbjct: 1   MTSKRRFFVTTALPYANGPFHIGHIMEYIQADTWVRFQRMQGHEVHFVGADDAHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--- 117
           AA+ AG T + FV   +       D   I +D++  T    +H   + +++ +   G   
Sbjct: 61  AAEKAGKTPQQFVADIAAGRAQYLDGFHIRFDNWHNTDAPENHQLAQDIYRALRKNGLIA 120

Query: 118 --------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQW---- 159
                   D  KG +     L D  Y        GA  QY +A       + P +     
Sbjct: 121 MRDIEQFFDPVKGMF-----LPDR-YIKGQCPKCGAADQYGDACEVCGAVYAPTELKHPY 174

Query: 160 ----------MEEEGYFFRLSAYQDKLLSYYE-------SHPEFILPIERRNEVISFVKS 202
                      + E YFF+LS+  D+   Y         +H +  L  E  N+V  +  +
Sbjct: 175 STLSGATPELRKSEHYFFQLSS--DRCADYLRDWTQATNAHGQPHLQTEVLNKVREWFTT 232

Query: 203 ------GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKF 255
                 GL D  +SR    +GI+IPD P    YVW+DA   YL +   + D   G  A+ 
Sbjct: 233 DENGHGGLADWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNHFDK--GQAAQH 290

Query: 256 WPA------------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           W A                   +H IGKDI+ FH ++WPA L  +    P ++  HGF+ 
Sbjct: 291 WHAPSRTAQSFDAFVADPAVEQVHFIGKDIVYFHTLFWPAMLHFSGRKTPSQINVHGFVT 350

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADL 354
             GEK+SKS G  I P++ + ++G++   LRY+L  ++    +D  +  +    RVN+DL
Sbjct: 351 VGGEKMSKSRGTGISPLKYL-DIGLNPEWLRYYLAAKLTARVEDVDFTPEDFVARVNSDL 409

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N+ SR+   I + +DG +     +  +   +      +  ++    + +   RAL
Sbjct: 410 IGKYVNIASRAAKFISQYFDGKL----GYAHNTGDLRDAAKALADDVAAAFEAREYARAL 465

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANK 472
            ++++    ++  FDA +PW L K    RA         +     L+++L   +P L  +
Sbjct: 466 REIMAYADRINTAFDAAQPWILAKDEARRAELQDACSQALAGFWLLSVMLSPVLPALTAR 525

Query: 473 IFDILFVADENRCFQ---SLDQRLKPGFMLHKTFDP 505
           +   LF  + +  +     L Q   P   L    DP
Sbjct: 526 VARELFGLERDFVWSDATELPQHAAPYQHLMHRIDP 561


>gi|46190591|ref|ZP_00121331.2| COG0143: Methionyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 595

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 234/503 (46%), Gaps = 65/503 (12%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMADVLDI 89
           +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+T +   ++ +R   +D+ D L +
Sbjct: 3   SDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTAQELANRYNRVIAKDLCD-LGL 61

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVY- 142
           SYD F RTT   H    + ++K+  + G IYKG        S   +L D     +  +  
Sbjct: 62  SYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVAISPSTGRTLPDRYIEGECPICH 121

Query: 143 -KGADGQYYNAQHN---------PV--------QWMEEEGYFFRLSAYQDKLLSYYESHP 184
            +GA G   +A  N         PV        ++ + E YF  L A  +   ++ E+  
Sbjct: 122 AEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEHYFLDLPALAEANKAWLETRK 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTN 237
            +      R  VI+F     K++     T   DWGI +P     D+P   +YVW DA+  
Sbjct: 182 GW------RTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKDWIDNPNKKLYVWFDAVIG 235

Query: 238 YLTTTGYLDNPDGSKAKF--WPAD-----LHVIGKDILRFHAIYWPAFLLSAN------- 283
           YL+ +       G   K+  W  D      + +GKD + FH+  WP+ +L+ N       
Sbjct: 236 YLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQIWPSEMLAYNGKGSKGG 295

Query: 284 -------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                  L LP++V +  F+  +G+K S S G VI   +++    VDA+RY++       
Sbjct: 296 ETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPVDAVRYYISVAGPES 355

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            D  +      +  N +LA+  GNLV+R  ++I K++ G IP     + T  D  +L   
Sbjct: 356 SDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNF-GEIPPLDEDSMTNEDRGLLEEA 414

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           S     +  +++      AL++ + +V ++++Y  A +PW++K     R  TVL+V  + 
Sbjct: 415 SAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKIKDDQA-RLGTVLHVAAQA 473

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F+P  A K+++ L
Sbjct: 474 VSDANHLLAPFLPHSAQKVWEAL 496


>gi|229099491|ref|ZP_04230419.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228683787|gb|EEL37737.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 544

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 234/514 (45%), Gaps = 47/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT     D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVVEIADKYHEEFERCFHSLGFTYDCYTRTDSEYHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q+++    E   +       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPVGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGVGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K YDG++P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLRFIEKYYDGVVPKGTIHVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  +   V   I +         AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 VEGLYKYVGAAIEQTK----FKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|146281645|ref|YP_001171798.1| methionyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569850|gb|ABP78956.1| methionyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 692

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 233/524 (44%), Gaps = 60/524 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 14  MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 73

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L +++D+F  T    + +   +++ ++ D G I
Sbjct: 74  RAEKEGITPEQLIANVQAEHSADFADFL-VNFDNFHSTHSPENRELAELIYTRLRDAGHI 132

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++   ++  +  D   KG      A+ QY        A + P +  +      
Sbjct: 133 ATRSVTQYFD-PEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAIS 191

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF+L  ++  L  +        L     N++  ++  GL++  +SR  
Sbjct: 192 GATPVLKDSKHFFFKLPDFEAMLKEWTRGG---ALQESVANKIAEWLDGGLQEWDISRDA 248

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP----ADL-HVIGKD 266
             +G +IP +P    YVW+DA   Y+ +   L    P+ S   FW     A+L H IGKD
Sbjct: 249 PYFGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKD 308

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 309 IINFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLR 368

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTP- 380
           Y+   ++  G  D   + D   ++VN+DL   + N+ SR    I K  DG++    P P 
Sbjct: 369 YYYASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE 428

Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              AF  +  SI         E R+        RA+ ++++L    + +   + PW L K
Sbjct: 429 LWAAFQAAAPSIADA-----YEARD------FARAMREIMALADRANAWIADKAPWALNK 477

Query: 439 TNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               +A    +  + V + RQL I L+  +P LA      L VA
Sbjct: 478 VEGKQAEVQEICALGVNLFRQLVIFLKPVLPNLAAAAEQFLNVA 521


>gi|158341247|ref|YP_001522389.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|187645697|sp|A8ZQ66|SYM1_ACAM1 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|158311488|gb|ABW33099.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 558

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 234/513 (45%), Gaps = 40/513 (7%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ AD+ ARF R +G +VL+   TDEHG     AA +AG+
Sbjct: 5   ITSALPYINGIKHLGNLVGSMLPADIYARFLRQEGEEVLYICATDEHGTPAEIAAIDAGL 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  +     +++     +S+D F RT+   +H+  +  +++++ +  I +   S +
Sbjct: 65  EVAEFCAKQYHKQKEIYKRFGLSFDYFGRTSAPENHELTQYFYQQLAKQNFIEEREISQF 124

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG------------ 164
           Y+L D+ +  D  V        Y+ A G Q  N      P + ++               
Sbjct: 125 YALDDQRFLPDRYVTGTCPHCGYEQARGDQCENCTKVLTPTELIKPRSTISGSTHLELRT 184

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               F RL    D++ ++ +   ++      ++  + ++  GLK   ++R    WG+ +P
Sbjct: 185 SRHLFLRLDKLSDEVRNWVDKQTQW--STLTKSIALKWLNEGLKSRCITRDLV-WGVPVP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLH---VIGKDILRFHAI 273
            +   + + YVW DA   Y++ T    +   +  + W     D+H    + KD L FH I
Sbjct: 242 TEGFERKVFYVWFDAPIGYISATKAWGDITNNDWECWWKESDDVHYTQFMAKDNLPFHTI 301

Query: 274 YWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            WPA +L +  P     +  GF  + + G K S S    +   + +E    D  RY L+ 
Sbjct: 302 MWPATILGSREPWKMVDYIKGFNWLNYYGGKFSTSSQRGVFLDQALEIASADNWRYMLIA 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +  +  +K+VN +LA+ +GN V+R +      +   +P  G   +++  + 
Sbjct: 362 NAPESADSAFTWEQFQKQVNKELADNLGNFVNRILKFTASRFGMTLPEGGTPGDAEAELQ 421

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
             C+ +++++R+ + N    RA   + +L    ++Y D + PW L KT+ D  + V+   
Sbjct: 422 VTCNELVEKLRKYLHNLEFRRATETLNALWRTGNQYIDVRAPWVLFKTDQDETAMVIRTC 481

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           V +IR  AI    F+P     +FD L + D  R
Sbjct: 482 VNLIRLYAISSAPFIPHTTQALFDALQLTDVER 514


>gi|167561950|ref|ZP_02354866.1| methionyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 710

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 226/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  DV  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDVWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K  +++  R  +   D   +S+D+F  T    +      ++  + D G I +  
Sbjct: 69  QEGVTPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 129 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGIDFDAWIKKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +  +L+     + +I  + + +   RAL Q + L  EV+ Y D  KPWEL K   + A+
Sbjct: 422 MNHPLLATLRDAIPQIAAHYEAREYGRALRQTMELADEVNGYVDTAKPWELAKDPANAAA 481

Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +     VA
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGVA 518


>gi|172061392|ref|YP_001809044.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|226710896|sp|B1YUT2|SYM_BURA4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|171993909|gb|ACB64828.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 720

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 45/516 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAERA 136

Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161
               Y    E +  D     E  K       G + +   + + P + +            
Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  S+       +   E  N++  ++    ++ L D  +SR   
Sbjct: 197 RKTSTHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKDIL
Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY
Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
           +  +++     +  I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N    
Sbjct: 431 NHPLVAKLRDAIASIAAHYEGREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVAL 490

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                V++E  R L++ L+  +P++A  +     VA
Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526


>gi|146329154|ref|YP_001209826.1| methionyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|187647717|sp|A5EY62|SYM_DICNV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146232624|gb|ABQ13602.1| methionyl-trna synthetase [Dichelobacter nodosus VCS1703A]
          Length = 673

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 227/502 (45%), Gaps = 46/502 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++++S+A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I   A+  
Sbjct: 5   RIFVSSALPYANGSIHLGHMVEHIQTDIWVRFQQLRGHECYYVCADDAHGTAIMLHAEKK 64

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GVT +V +D+  + +  D    L I++  +  T    +      +++ +  KG I K   
Sbjct: 65  GVTPEVLLDEVRAEHISDFQGFL-INHHHYHTTHSDENRQLTNEIYQTLKSKGYILKKEI 123

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           S  +   ++  +  D   KG      A  QY        + + P   ++           
Sbjct: 124 SQLFD-PEKNIFLPDRFIKGICPKCQAKDQYGDNCEVCGSTYAPTDLIQPYSVLSGATPI 182

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L  + D L  + +      L    R+++  + ++GL+   +SR    WG 
Sbjct: 183 MKKSEHFFFDLPQFTDFLKDWLQRAD---LQPAMRHKLAEWFEAGLQPWDISRDAPYWGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            IP+      YVW+DA   YL +       +   S   FW  D      H IGKDI  FH
Sbjct: 240 TIPEAKDKYFYVWLDAPVGYLGSFQAFCQQHQHVSFDDFWRDDNKTERYHFIGKDIAYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WPA L  A L  P  VF HGF+   GEK+SKS G  I     ++ +  + LRY++  
Sbjct: 300 MLFWPAMLEGAGLQKPTGVFCHGFLTVNGEKMSKSRGTFIKARTYLKHLRPEYLRYYIAS 359

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D   + +  +++VN+DL   + NL SRS   + +  D    T  AF  SD ++
Sbjct: 360 KLSAKVEDIDLNLNDFRQKVNSDLVGKLINLASRSAPFLQRFADNT--TVSAF--SDSAL 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
           L       + I  + + +   +A+ +V++L   V+ Y D  KPW L K     A  + + 
Sbjct: 416 LEQLRGKSETIARDYEQREFGQAVREVMALADAVNAYVDETKPWILAKETGKAAEIAQIA 475

Query: 449 YVTVEVIRQLAILLQAFVPKLA 470
            V +E  R L I L+  +PK+A
Sbjct: 476 SVVLEAFRLLIIYLKPVLPKVA 497


>gi|229164009|ref|ZP_04291946.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228619392|gb|EEK76281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 544

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 243/541 (44%), Gaps = 56/541 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q+++    E   +       R+  I     +VK GL+D ++SR     G+
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQ---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G   + FW  D    +V GKD + F
Sbjct: 239 PIPVTGYEDKK--VYVWIEAVTGYYSASKHWAEETGKDDREFWDRDAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P  + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEDAIPHHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G++P      E  + 
Sbjct: 357 TINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGILPKGSIDVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 V----EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDERQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             V +I   A LL+ F+P  + ++   L +         + Q   P   L    D + P 
Sbjct: 473 NCVYLIANFANLLEPFLPFSSERVRTTLSI---------VQQTWGPQNTLPSRIDSVQPL 523

Query: 510 F 510
           F
Sbjct: 524 F 524


>gi|294339578|emb|CAZ87937.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Thiomonas sp. 3As]
          Length = 721

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 243/576 (42%), Gaps = 86/576 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + + +++TA+ Y N   HIGH  E I AD   RF R+ G +V F    D HG  I  
Sbjct: 1   MTSKRRFFVTTALPYANGPFHIGHIMEYIQADTWVRFQRMQGHEVHFVGADDAHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--- 117
           AA+ AG T + FV   +       D   I +D++  T    +H   + +++ +   G   
Sbjct: 61  AAEKAGETPQQFVADIAAGRAQYLDGFHIRFDNWHNTDAPENHQLAQDIYRALRKNGLIA 120

Query: 118 --------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQW---- 159
                   D  KG +     L D  Y        GA  QY +A       + P +     
Sbjct: 121 MRDIEQFFDPVKGMF-----LPDR-YIKGQCPKCGAADQYGDACEVCGAVYAPTELKHPY 174

Query: 160 ----------MEEEGYFFRLSAYQDKLLSYYE-------SHPEFILPIERRNEVISFVKS 202
                      + E YFF+LS+  D+   Y         +H +  L  E  N+V  +  +
Sbjct: 175 STLSGATPELRKSEHYFFQLSS--DRCADYLRDWTQAANAHGQPHLQTEVLNKVREWFTT 232

Query: 203 ------GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKF 255
                 GL D  +SR    +GI+IPD P    YVW+DA   YL +   + D   G  A+ 
Sbjct: 233 DENGHGGLADWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNHFDK--GQAAQH 290

Query: 256 WPA------------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           W A                   +H IGKDI+ FH ++WPA L  +    P ++  HGF+ 
Sbjct: 291 WHAPSRTAQSFDAFVADPAVEQVHFIGKDIVYFHTLFWPAMLHFSGRKTPSQINVHGFVT 350

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADL 354
             GEK+SKS G  I P++ + ++G++   LRY+L  ++    +D  +  +    RVN+DL
Sbjct: 351 VGGEKMSKSRGTGISPLKYL-DIGLNPEWLRYYLAAKLTARVEDVDFTPEDFVARVNSDL 409

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N+ SR+   I + +DG +     +  +   +      +  ++    + +   RAL
Sbjct: 410 IGKYVNIASRAAKFISQYFDGKL----GYAHNTGDLRDAAKALADDVAAAFEAREYARAL 465

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANK 472
            ++++    ++  FDA +PW L K    RA         +     L+++L   +P L  +
Sbjct: 466 REIMAYADRINTAFDAAQPWILAKDEARRAELQDACSQALAGFWLLSVMLSPVLPALTAR 525

Query: 473 IFDILFVADENRCFQ---SLDQRLKPGFMLHKTFDP 505
           +   LF  + +  +     L Q   P   L    DP
Sbjct: 526 VARELFGLERDFVWSDATELPQHAAPYQHLMHRIDP 561


>gi|212695407|ref|ZP_03303535.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855]
 gi|212662042|gb|EEB22616.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855]
          Length = 680

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 239/510 (46%), Gaps = 51/510 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 10  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DK +  +     +
Sbjct: 70  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 129

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 130 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 188

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWG 217
            + ++  L  ++  L  +  E+H E+     R N   +  S++  GL+  ++SR   DWG
Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEW-----RPNVYGQCKSWLDMGLQPRAVSRD-LDWG 242

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + F
Sbjct: 243 IPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVF 299

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY
Sbjct: 300 HCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D
Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+
Sbjct: 420 KETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLVKTDMDRVATI 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + ++++  LAI  + F+P  + K+  +L
Sbjct: 480 LNIALQLVANLAIAFEPFLPFSSEKLRQML 509


>gi|15604750|ref|NP_219534.1| methionyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|7388280|sp|O84035|SYM_CHLTR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3328422|gb|AAC67622.1| Methionyl-tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748163|gb|ADI50709.1| Methionyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749043|gb|ADI51721.1| Methionyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 550

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 235/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + +P+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA  +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAAIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|315928497|gb|EFV07803.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 399

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 137/225 (60%), Gaps = 2/225 (0%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
           G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+SKS GN
Sbjct: 13  GENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGN 72

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R + M 
Sbjct: 73  VVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMS 132

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K   G I   G     +   L+     L    E ++N   +R L ++   +S  +    
Sbjct: 133 TKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAIS 191

Query: 430 AQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +PW L K N  ++A+ ++ +   ++ + ++LL   +PK + K+
Sbjct: 192 KYEPWSLIKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKV 236


>gi|237725990|ref|ZP_04556471.1| methionyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229435798|gb|EEO45875.1| methionyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 694

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 238/507 (46%), Gaps = 45/507 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 24  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 83

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DK +  +     +
Sbjct: 84  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIEKTSMQY 143

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 144 YDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSQPVM-RE 202

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            + ++  L  ++  L  +  E+H E+   +    +  S++  GL+  ++SR   DWGI +
Sbjct: 203 TKHWYLPLDKHEGWLREWILENHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-LDWGIPV 259

Query: 221 PDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + FH I
Sbjct: 260 PVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVFHCI 316

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLV 330
            +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY L 
Sbjct: 317 VFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRYVLT 376

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ D+  
Sbjct: 377 ANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDYDKET 436

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+L +
Sbjct: 437 LKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLVKTDMDRVATILNI 496

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++++  LAI  + F+P  + K+  +L
Sbjct: 497 ALQLVANLAIAFEPFLPFSSEKLRQML 523


>gi|37679443|ref|NP_934052.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|61216264|sp|Q7MM14|SYM_VIBVY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|37198187|dbj|BAC94023.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 690

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 231/542 (42%), Gaps = 60/542 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ
Sbjct: 10  QRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQ 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I    
Sbjct: 70  QMGMSPEEMIAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 129

Query: 124 YSGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM----- 160
            S  +    E +  D  V KG                A G+ Y+     NP   +     
Sbjct: 130 ISQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 188

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 189 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFG 245

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ F
Sbjct: 246 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYF 305

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+  
Sbjct: 306 HSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYA 365

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    D    + +   +RVNAD+ N I NL SR+   I K ++G +       E    
Sbjct: 366 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNE 425

Query: 390 ILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445
            ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K         
Sbjct: 426 FVAAADRIAELYEARE------FGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQ 479

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRL 493
            +  V + + R L   L+  +P LA +    L              A E   F++L  R+
Sbjct: 480 EICSVGINLFRVLMTYLKPVMPALAARTEAFLNEELTWEGVAQPLTAHEITAFKALFNRI 539

Query: 494 KP 495
            P
Sbjct: 540 DP 541


>gi|260060957|ref|YP_003194037.1| methionyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785089|gb|EAR16258.1| methionyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 691

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 230/515 (44%), Gaps = 49/515 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I+ A+ Y N   HIGH A   + AD+ +R+ RL G +VLF  G+DEHG  I   A 
Sbjct: 9   ERTTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLRGEEVLFVCGSDEHGVAIPMKAG 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K  +D+     R+  +   I++D++ RT+   H +T    + K+ D+GD  +  
Sbjct: 69  REGISPKELIDKYDALIRESFEAFGIAFDNYSRTSAPIHRETASAFFTKLHDQGDFEEQV 128

Query: 124 YSGWYSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
               +      +  D  V     K    + Y  Q       E  G     +   D   + 
Sbjct: 129 TDQLFDPEAGQFLADRFVVGTCPKCGHTEAYGDQ------CENCGSSLNATDLIDPRSAI 182

Query: 180 YESHP------EFILPIERR---------------------NEVISFVKSGLKDLSLSRK 212
             + P       + LP++R                       +  S++  GLK  +++R 
Sbjct: 183 SGAQPVLKQTRHWFLPLDRYEGFLRTWILDGHKNDWKPNVYGQCKSWIDEGLKPRAVTRD 242

Query: 213 TFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265
             +WGI +P +     ++YVW DA   Y+++T      +G+  + W  D     LH IGK
Sbjct: 243 -LEWGIPVPLEGAEGKVLYVWFDAPIGYISSTREWARREGADWEIWWKDPGTRLLHFIGK 301

Query: 266 DILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--V 322
           D + FH I +P+ L +  +  LP+ V ++ F+  +G+K+S S    +   E +EE     
Sbjct: 302 DNIVFHCIIFPSMLKAHGDFILPENVPANEFLNLEGQKLSTSKNWAVWLHEYLEEFPDMQ 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY L       KD  +     + R N +L    GN ++R   +  K   G +P    
Sbjct: 362 DVLRYALTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTDKYKGGQVPALQN 421

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +E+D + L         I + +          ++++L    ++Y   ++PW++ K +PD
Sbjct: 422 LSENDRNTLHAMRAYPARIADCLDRFRFREGSQELMNLARLGNKYLADEEPWKVIKEDPD 481

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R  T+L V ++V   LA+L + F+P  A ++ +IL
Sbjct: 482 RVGTILGVGLQVAAALAVLCEPFLPFTAGRLREIL 516


>gi|33591426|ref|NP_879070.1| methionyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|68565997|sp|Q7W0F7|SYM_BORPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33571068|emb|CAE40559.1| methionyl-tRNA synthetase [Bordetella pertussis Tohama I]
          Length = 692

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 250/555 (45%), Gaps = 63/555 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117
           +T +  V + +       D   I +D +  T    +    + +++ +  +G         
Sbjct: 65  ITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSIEQ 124

Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P + +               
Sbjct: 125 FYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVLKS 184

Query: 162 EEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISF-VKSGLKDLSL 209
            + +FF+LS    + + + +            H +  +  + R  ++    ++ L D  +
Sbjct: 185 SDHFFFKLS--DPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLVGDDGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPA----DLHVI 263
           SR    +GI+IPD P    YVW+DA   YL +        G    A   PA     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAAKGLDFDALLDPAGPTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FHA++WPA L  A    P ++  HGFI   GEK+SKS G  I P+  + E+G+D
Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYL-EIGMD 361

Query: 324 A--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           A  LRY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ + I + +DG +   
Sbjct: 362 AEWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGEL--- 418

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438
            A+    +++ +  ++  + IR   + +  +RA+ ++++    +++ FDA +PW + K  
Sbjct: 419 -AYDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGI 477

Query: 439 -----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLD 490
                    R   +    +   + L+++L   +P LA+++   LF A+ +  +   Q L 
Sbjct: 478 GAADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLP 537

Query: 491 QRLKPGFMLHKTFDP 505
           QR+ P   L +  DP
Sbjct: 538 QRVAPFKHLMQRVDP 552


>gi|187649782|sp|A4VJ05|SYM_PSEU5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 679

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 233/524 (44%), Gaps = 60/524 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D AD L +++D+F  T    + +   +++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFADFL-VNFDNFHSTHSPENRELAELIYTRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEEG--- 164
                + ++   ++  +  D   KG      A+ QY        A + P +  +      
Sbjct: 120 ATRSVTQYFD-PEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAIS 178

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      +FF+L  ++  L  +        L     N++  ++  GL++  +SR  
Sbjct: 179 GATPVLKDSKHFFFKLPDFEAMLKEWTRGG---ALQESVANKIAEWLDGGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP----ADL-HVIGKD 266
             +G +IP +P    YVW+DA   Y+ +   L    P+ S   FW     A+L H IGKD
Sbjct: 236 PYFGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LR
Sbjct: 296 IINFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLR 355

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTP- 380
           Y+   ++  G  D   + D   ++VN+DL   + N+ SR    I K  DG++    P P 
Sbjct: 356 YYYASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE 415

Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              AF  +  SI         E R+        RA+ ++++L    + +   + PW L K
Sbjct: 416 LWAAFQAAAPSIADA-----YEARD------FARAMREIMALADRANAWIADKAPWALNK 464

Query: 439 TNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               +A    +  + V + RQL I L+  +P LA      L VA
Sbjct: 465 VEGKQAEVQEICALGVNLFRQLVIFLKPVLPNLAAAAEQFLNVA 508


>gi|161936261|ref|YP_101774.2| methionyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|253566405|ref|ZP_04843858.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265767265|ref|ZP_06094931.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|68565973|sp|Q64MP7|SYM_BACFR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|251944577|gb|EES85052.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263252570|gb|EEZ24082.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301165294|emb|CBW24865.1| putative methionyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 679

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 242/514 (47%), Gaps = 45/514 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+ K HH+     +KK+ +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y      +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 183 KPVM-KETKHWYLPLDKHETWLRQWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSR-D 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLVHFIGKD 295

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +E+     D
Sbjct: 296 NIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G  
Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGEL 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           T+ D+  L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R
Sbjct: 416 TDYDKETLKEFSDVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             T+L ++++++  LAI  + F+P  + ++  +L
Sbjct: 476 VGTILNISLQLVANLAIAFEPFLPFSSERLRQML 509


>gi|237802466|ref|YP_002887660.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273700|emb|CAX10478.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 550

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 235/514 (45%), Gaps = 48/514 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           E  ++ I++A+ Y N   H GH   AY  + ADV ARF RL G +VL+  G+DE+G  I 
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAY--LPADVYARFQRLQGKEVLYICGSDEYGIAIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +
Sbjct: 60  LNAELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLV 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHN------------- 155
                   YS  +  +  D  V            +G + Q   A +              
Sbjct: 120 ENQVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTG 179

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +   + E  +  L   ++ LL++ +      L    RN V  +++  L+  +++R   
Sbjct: 180 AALSLRDTEHAYLHLERMKEDLLAFVQG---IYLRPHMRNFVTDYIEH-LRPRAVTRD-L 234

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFWPADL----HVIGKD 266
            WGI +PD    + YVW DA   Y++ T      + +P+  K KFW  D       IGKD
Sbjct: 235 SWGIPVPDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWK-KFWLDDTVTYAQFIGKD 293

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              FHA+ +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D 
Sbjct: 294 NTSFHAVIFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDK 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L        D  +     K R N++L    GN V+R ++  +K+    + +P    
Sbjct: 354 LRYVLAAIAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKNGCTELSSP-QLE 412

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR 443
           + D   +S   ++ ++  E+     + +  + ++ L +  + YF+ + PW+L K+ N +R
Sbjct: 413 QKDLDFISKSQKLAKDAAEHYAQYSLRKVCSTIMELAALGNGYFNDEAPWKLAKEGNWNR 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +L+      + LA++    +P+ A KI +++
Sbjct: 473 VRAILFCACYCQKLLALISYPIMPETALKILEMI 506


>gi|254421312|ref|ZP_05035030.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188801|gb|EDX83765.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 562

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 227/517 (43%), Gaps = 44/517 (8%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV ARF R +G +VL+   TDEHG     AA   G+
Sbjct: 5   ITSALPYINGIKHLGNLVGSMLPADVYARFLRQEGEEVLYICATDEHGTPAEIAAVEEGL 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  +      D+     +S+D F RT+     +  +  ++++ ++G I +   S  
Sbjct: 65  EVAEFCQRQYERQADIYQQFGLSFDYFGRTSSVEQKELTQYFYRRLDEQGYIEERETSQV 124

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG------------ 164
           YS+ D+ +  D  V        Y+ A G Q  N     +P + +E               
Sbjct: 125 YSIADQRFLPDRYVEGTCPNCGYERARGDQCENCTKLLSPTELIEPRSAISGSTNVEVRA 184

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               F RL    D +  + ++   +  P   R+    ++  GL+   ++R    WG+ +P
Sbjct: 185 SRHLFLRLDQLSDDVRRWVDAQTNW--PNLTRSIAYKWLDEGLQSRGITRD-LKWGVPVP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYL------DNPDGSKAKFWPAD----LHVIGKDILR 269
            +     + YVW DA   Y++ T         +N    K+ ++ AD       + KD L 
Sbjct: 242 KEGFEDKVFYVWFDAPIGYVSATKAWSDQQSDENTTDWKSWWYDADDVSYTQFMAKDNLP 301

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH I WPA +L    P     +  GF  + + G K S S    +   + +E    D  RY
Sbjct: 302 FHTIMWPATILGTKEPWKMANYIKGFNWLNYYGGKFSTSSKRGVFLDQALEIAPADYWRY 361

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+       D  +  +  + +VN +LA+  GN ++R +   +  +   +P  G   E++
Sbjct: 362 MLMASAPESADSAFTWEQFQTKVNKELADNFGNFINRILKFTVSRFGNELPAGGEPGEAE 421

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            ++   C  ++  +R ++QN    +A   + +L S  ++Y D + PW L K + D A+ V
Sbjct: 422 AALEKTCKEMVARLRSHLQNMEFRKATETLNALWSAGNQYIDVRAPWTLFKQDKDEAAVV 481

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +   + +IR  AI    F+P  + ++FD L +    R
Sbjct: 482 IRTCINLIRLYAIASSPFIPATSQQLFDALQLTKAER 518


>gi|288801014|ref|ZP_06406470.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331948|gb|EFC70430.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 681

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 237/520 (45%), Gaps = 53/520 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++ A+ Y N   HIGH A   I AD+  R+ RL G +V F  G+DEHG  I  
Sbjct: 4   KNYKRTTVTAALPYANGGVHIGHLAGVYIPADIYVRYLRLKGEEVAFICGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+  +  +D      IS+D + RTT K H  T    +K + D   + 
Sbjct: 64  RAKKEGITPQDVVDRYHQLIKDSFSDFGISFDIYSRTTSKIHQQTASDFFKHLLDNNKLQ 123

Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGAD---GQYYNAQHN---- 155
           +G     Y                     +E  Y D     G D    +  N +      
Sbjct: 124 EGETEQLYDEEVHQFLADRYITGECPHCHNEGAYGDQCESCGRDLSPTELINPKSTISGS 183

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   + + ++  L+ YQ  L  +  E H E+      R  V    KS L DL L  + 
Sbjct: 184 TPVL-RKTKNWYLPLNDYQTWLKEWILEGHKEW------RANVYGQCKSWL-DLDLQPRA 235

Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHV 262
                +WGI +P +     ++YVW DA   Y++ T  L   D  K   W  D     +H 
Sbjct: 236 MTRDLNWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELYPNDWKK---WWQDSETRLVHF 292

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH I +P+ L +  +  LP+ V ++ F+  +  KIS S    I   E ++E+ 
Sbjct: 293 IGKDNIVFHCIIFPSMLKAHGDYILPENVPANEFLNLEDNKISTSRNWAIWLHEYLQELP 352

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N +L    GN V+R++ +  K ++G++P 
Sbjct: 353 NKQDVLRYVLTANAPETKDNNFTWKDYQERNNNELVAVYGNFVNRALQLTKKYFNGVVPA 412

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D+ + +    V +++   + N     A  +V+++    ++Y    +PW+L KT
Sbjct: 413 CGELLDIDKEVFNELKGVKEKVETLLNNYKFRDAQREVMNIARIGNKYMTDCEPWKLWKT 472

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            P R  T+LYV ++++  LAI  + F+P  + K+  ++ +
Sbjct: 473 EPQRVETILYVCLQLVANLAIAFEPFLPFSSKKLRQLIHI 512


>gi|323343515|ref|ZP_08083742.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095334|gb|EFZ37908.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 687

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 235/517 (45%), Gaps = 53/517 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 4   KNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVIFIGGSDEHGVPIMI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT + HH+     ++K+ D G + 
Sbjct: 64  RARKEGITPQDVVDRYHSLIKKSFEDFGISFDIYSRTTSETHHNLASDFFRKLYDNGKLI 123

Query: 121 KGCYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWME------- 161
           +     +Y      +  D            D  Y G   +   +  +P++ ++       
Sbjct: 124 EKETEQYYDEEAHQFLADRYIVGECPHCHNDHAY-GDQCERCGSDLSPMELIDPHSTISG 182

Query: 162 -------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                   + ++  L+ YQ+ L  +  E H E+      R+ V    KS L D+ L  + 
Sbjct: 183 SKPIIKKTKNWYLPLNEYQEWLKQWILEDHQEW------RSNVYGQCKSWL-DMDLQPRA 235

Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--------D 259
                DWGI +P D     ++YVW DA   Y++ T  L + +  K   W           
Sbjct: 236 MTRDLDWGIPVPVDGADGKVLYVWFDAPIGYISNTKELCDREPQKWGKWETWWKDEDTRL 295

Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +H IGKD + FH + +P  L +     LP  V ++ F+  + +KIS S    +   E + 
Sbjct: 296 VHFIGKDNIVFHCLIFPVMLKAHGGYILPDNVPANEFLNLENDKISTSRNWAVWLHEYLA 355

Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY L       KD  +     ++R N +L    GN V+R++ +  K ++G+
Sbjct: 356 DLPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFNGI 415

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D   LS    V Q++   +       A  + ++L    +RY    +PW++
Sbjct: 416 VPVCGELLEVDRQALSEFKNVKQDVETLLDAFKFRDAQKEAMNLARIGNRYITECEPWKV 475

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            KT+P R  T+LY++++++  LAI  + F+P  + K+
Sbjct: 476 WKTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512


>gi|319640248|ref|ZP_07994973.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|317388023|gb|EFV68877.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 680

 Score =  169 bits (429), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 238/507 (46%), Gaps = 45/507 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+
Sbjct: 10  VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     ++      IS+D + RTT K HH+     +K + DKG+  +     +
Sbjct: 70  TPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIEKTSMQY 129

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQHNPVQWME 161
           Y      +  D  +     +  A+G Y +                     +   PV   E
Sbjct: 130 YDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-RE 188

Query: 162 EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            + ++  L  ++  L  +  E+H E+   +    +  S++  GL+  ++SR   DWGI +
Sbjct: 189 TKHWYLPLDKHEGWLREWILENHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-LDWGIPV 245

Query: 221 PDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD + FH I
Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFIGKDNIVFHCI 302

Query: 274 YWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLV 330
            +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY L 
Sbjct: 303 VFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRYVLT 362

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 KD  +     + R N +L    GN V+R++ +  K +DG +   G  T+ D+  
Sbjct: 363 ANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVSVCGELTDYDKET 422

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T+L +
Sbjct: 423 LKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVATILNI 482

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++++  LAI  + F+P  + K+  +L
Sbjct: 483 ALQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|148653506|ref|YP_001280599.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|187647756|sp|A5WG58|SYM_PSYWF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148572590|gb|ABQ94649.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 697

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 57/526 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  R  +     V +    D HG  I   A+  
Sbjct: 3   QILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAQSHQVTYVCADDAHGTAIMLKAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GVT  +      + +  D +  L I +D++  T  + + +   +++++++ +G I     
Sbjct: 63  GVTPEQQIATVKASHEADFSKFL-IGFDNYHSTHSEENRELSELIYRRLNGEGHISTKDV 121

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWME------ 161
              +      +  D  V       GA  QY          YNA    NP   +       
Sbjct: 122 EQLFDPEKGLFLADRFVKGECPECGAQDQYGDNCEVCGTTYNATELKNPYSTLSGATPVL 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + YFF L  ++  L  +  +  E  L     N++  + ++GL    +SR    +G K
Sbjct: 182 RTSKHYFFNLPEFESFLKQW--TKDEGRLQPSVSNKLQEWFEAGLASWDISRDAPYFGFK 239

Query: 220 IPDDPQ----YIMYVWIDALTNYLTT--------TGYLD--NPDGSKAKFWPAD------ 259
           IPD P+       YVW+DA   Y+ +         G  D   P+ S   +W  +      
Sbjct: 240 IPDTPEGEPDKYFYVWLDAPVGYMASFKNLCKQRQGSTDPQQPELSFDDYWLQENQHKTE 299

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FHA++WPA L  +    P  VF+HGF++  G+K+SKS G  I      +
Sbjct: 300 LYHFIGKDIVYFHALFWPAMLAGSEYRTPTGVFAHGFLMVNGDKMSKSRGTFIQAETFAK 359

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+   +++   +D   D     ++VN+D+   + N+ SRS   I K YDGM+
Sbjct: 360 HLNPEYLRYYFASKLSEKVEDINLDFADFMQKVNSDMVGKVVNIASRSAGFIAKKYDGML 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A  E    +L+   R  +EI    +N+   RA+  ++    + + Y D++KPW + 
Sbjct: 420 SDSCAEPE----LLNEIVRAGEEIATAYENREFSRAMRLIMQCADKANEYIDSKKPWAMA 475

Query: 438 KTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           K          V  V + + RQL + L   +P+L +     L + D
Sbjct: 476 KEEGREQEVQDVCTVAINIFRQLMVYLAPVLPELTDNAKAFLNIDD 521


>gi|302879580|ref|YP_003848144.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582369|gb|ADL56380.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 695

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 230/522 (44%), Gaps = 54/522 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G +V +    D HG  I   A++ 
Sbjct: 5   KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHEVHYVCADDTHGTPIMLRAESE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  + +  +   D      + +D +  T    +      ++  + +KG I      
Sbjct: 65  GITPEALIARVWQEHYDDFAAFHVEFDHYGSTNSAENKVCAESIYLALREKGLIEVRSIE 124

Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161
            +Y      +  D     E  K       G + +   A + P++ +              
Sbjct: 125 QFYDPVKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAAYAPIELINPYSAVSGAAPVMR 184

Query: 162 -EEGYFFRLSA--YQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
             + YFF+LSA   Q  L  +  S     L  E  N++  ++    ++ L D  +SR   
Sbjct: 185 NSDHYFFKLSADTCQQFLREWTRSGS---LQSEAANKMQEWLGAEGENKLSDWDISRDAP 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF---WPAD-----LHV 262
            +G +IPD P    YVW+DA   Y+ +   L N      GS+ +F   W  D      H 
Sbjct: 242 YFGFEIPDAPGKYFYVWLDAPVGYMGSFRQLCNSRMQDSGSRIEFDEYWKPDSTTELYHF 301

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-G 321
           IGKDIL FHA++WPA L  A    P K+F+HGF+   GEK+SKS G  I     ++ +  
Sbjct: 302 IGKDILYFHALFWPAMLEHAGFRTPTKLFAHGFLTVNGEKMSKSRGTFITAKSYVDNIKN 361

Query: 322 VDALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + LRY+   +I    +D   + D    +VN+DL     N+ SR    I K +DG +   
Sbjct: 362 TEYLRYYYAAKINGSMEDLDLNLDDFVAKVNSDLIGKYINIASRCAGFIAKKFDGKL--- 418

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           GA T+   S     +    EI ++ + +   RAL +++ L    ++Y   QKPWEL K  
Sbjct: 419 GA-TDLAASAEFQTAYASGEIAKSFEARDFARALREIMRLADVANQYIAEQKPWELAKQE 477

Query: 441 PDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              A         + + R L + L+  +P LA ++   L +A
Sbjct: 478 GAEAQLHIACSTAMTLFRDLTLYLKPVLPVLAGQVEAFLNIA 519


>gi|198284383|ref|YP_002220704.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666133|ref|YP_002427048.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226695270|sp|B7J7Y5|SYM_ACIF2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695271|sp|B5ENA8|SYM_ACIF5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|198248904|gb|ACH84497.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518346|gb|ACK78932.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 678

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 220/509 (43%), Gaps = 42/509 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + ++ I++A+ Y N   H+GH  E    D+ AR+ RL G D ++    D HG  I   AQ
Sbjct: 2   KRRILITSALPYANGPIHLGHLVEYTQTDIWARYQRLRGHDCVYVCADDAHGTPIMLRAQ 61

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK----------- 111
           + G+T +  + + +  + RD      I +D +  T    + +  + +++           
Sbjct: 62  SEGITPEELITRMHGDHLRDFTG-FGIRFDLYHSTHSPENFEISQSIYRALRAADYINVR 120

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME---------- 161
           +I    D   G +     +R            G   +   A ++P   +           
Sbjct: 121 EIEQAYDPVAGIFLPDRFIRGTCPRCGAADQYGDSCEVCGATYSPTDLINPVSAVSGAVP 180

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E YFF+L  + D L  +  S     L  E  +++  +   GL D  +SR    +G
Sbjct: 181 ERRNSEHYFFQLGDFSDFLRRWIHSG---TLQEEVAHKLDEWFSIGLSDWDISRDAPYFG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFH 271
           I IPD P    YVW+DAL  Y+  T +     G   A +W  D      H IGKDI+ FH
Sbjct: 238 IPIPDAPGKFFYVWLDALPGYMAATQHWCAAHGRNLADYWGPDSAAEIYHFIGKDIIYFH 297

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WPA L  +   LP  +F+HG +   G K+SKS G  I   + ++ +  + LRY++  
Sbjct: 298 GLFWPAMLKGSGHRLPTGIFAHGHLTVNGAKMSKSRGTSITARQYLQHLNPEFLRYYIAT 357

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D   + +    R N DL   + NL SR+   I + + G +    A    D++ 
Sbjct: 358 KLNSHVEDIDLNLEDFLLRGNGDLVGKVVNLASRAAGFIHRSFAGRL---AASLGKDQAF 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
                +  + I E    +   +A+  +++L  +++ Y D   PW L K      S   V+
Sbjct: 415 YDGLLQTQEAIGEAYAGREYGKAMRDIMALADQINAYVDQNAPWTLAKDPAQHESLHRVV 474

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            VT+   R L  LL   +P+L+ K  + L
Sbjct: 475 TVTLNGFRVLITLLSPVLPELSRKALEFL 503


>gi|168205783|ref|ZP_02631788.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662677|gb|EDT15360.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 514

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 231/495 (46%), Gaps = 29/495 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S++ F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     +++ GL+D  L+R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   IGN  +R ++ I K+++G I       E      ++  R    +    +N  +  
Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGQIKGE----ELPLQWKNIIRRTYASVGNKFENGELKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEMFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVADENRCFQ 487
           I   L + D    F+
Sbjct: 466 IKMFLGIKDTKWSFE 480


>gi|169343242|ref|ZP_02864253.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298540|gb|EDS80621.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 514

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 227/493 (46%), Gaps = 25/493 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT 240
             E  + I +R     +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPAEGFEDKRVYVWIDALLAYVT 231

Query: 241 TTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFSHG 294
            +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS  
Sbjct: 232 ASKKVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQ 291

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L
Sbjct: 292 YLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNEL 351

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
              IGN  +R ++ I K+++G I       E      ++  R    +    +       +
Sbjct: 352 VGAIGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNIIRRTYASVGNKFEEGEFKSGV 407

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI 
Sbjct: 408 KEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIK 467

Query: 475 DILFVADENRCFQ 487
             L + D    F+
Sbjct: 468 MFLGIKDTKWSFK 480


>gi|170703076|ref|ZP_02893899.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170132017|gb|EDT00522.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 720

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 45/516 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAERA 136

Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161
               Y    E +  D     E  K       G + +   + + P + +            
Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  S+       +   E  N++  ++    ++ L D  +SR   
Sbjct: 197 RKTSTHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKDIL
Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY
Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
           +  +++     +  I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N    
Sbjct: 431 NHPLVAKLRDAIASIAAHYEAREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVAL 490

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                V++E  R L++ L+  +P++A  +     VA
Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526


>gi|237798783|ref|ZP_04587244.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021636|gb|EGI01693.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 495

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 219/503 (43%), Gaps = 44/503 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D          D   + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFDDFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160
               + ++      +  D    KG      A+ QY        A + P            
Sbjct: 121 TRSVTQYFDPEKNMFLAD-RFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + + +FF L A+   L S+  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKDSKHFFFDLPAFDTLLKSWTRSG---TLQDAVANKIAEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL-----HVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L    PD     +W  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  ANL  P  +  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGANLRKPTAINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVQANAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
            ++ L+        I +  + +   RA+ + ++L    + Y   + PW L K     D  
Sbjct: 417 TDAFLAAAP----GIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             V  + + + RQL I L+  +P
Sbjct: 473 QAVCALGINLFRQLVIFLKPVLP 495


>gi|161501798|ref|NP_761825.2| methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|61216347|sp|Q8D8F2|SYM_VIBVU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|319999503|gb|AAO11352.2| Methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 690

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 231/542 (42%), Gaps = 60/542 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ
Sbjct: 10  QRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQ 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I    
Sbjct: 70  QMGMSPEEMIAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 129

Query: 124 YSGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM----- 160
            S  +    E +  D  V KG                A G+ Y+     NP   +     
Sbjct: 130 ISQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 188

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 189 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFG 245

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +   D    ++W  D      H IGKDI+ F
Sbjct: 246 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYF 305

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+  
Sbjct: 306 HSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYA 365

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++    D    + +   +RVNAD+ N I NL SR+   I K ++G +       E    
Sbjct: 366 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNE 425

Query: 390 ILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445
            ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K         
Sbjct: 426 FVAAADRIAELYEARE------FGRAIRELTALADKANQYVDEKAPWVVAKQEGKDQELQ 479

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------FVADENRCFQSLDQRL 493
            +  V + + R L   L+  +P LA +    L              A E   F++L  R+
Sbjct: 480 EICSVGINLFRVLMTYLKPVMPALAARTEAFLNEELTWEGVAQPLTAHEITAFKALFNRI 539

Query: 494 KP 495
            P
Sbjct: 540 DP 541


>gi|254496016|ref|ZP_05108919.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354765|gb|EET13397.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 566

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 219/509 (43%), Gaps = 49/509 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 14  MATERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMSGIQCISVCGDDAHGTPIML 73

Query: 61  AAQNAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
            A+  G+T +         + ++F+  A    I YD +  T    +      ++ K+   
Sbjct: 74  KAEQMGITPEALTTAIKISHEQDFQGFA----IDYDCYHTTHSPENQALASAIYAKLQAG 129

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME---- 161
           G I K      Y    E +  D  V       GA  QY        A + P   ++    
Sbjct: 130 GTIVKKTIRQAYDPLKEMFLPDRYVKGTCPKCGAKDQYGDNCEVCGATYAPTDLIDAVSA 189

Query: 162 ----------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                      E YFF L  ++  L  +  +     L  E  N++  +  +GLK   +SR
Sbjct: 190 ISGAKPIEKDSEHYFFDLPRFETLLKEWTRNGH---LQTEVANKLDEWFAAGLKQWDISR 246

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGK 265
               +G  IP       YVW+DA   Y+ +   Y D    S A+FW  D      H +GK
Sbjct: 247 DAPYFGFPIPGTIGKYFYVWLDAPIGYMASFKKYCDEHGVSFAEFWDKDSQAELYHFVGK 306

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FHA++WPA L +++  LP  V++HGF+   G+K+SKS G  ++    +E +  + L
Sbjct: 307 DIVYFHALFWPAMLAASDHRLPTAVYTHGFLTVDGQKMSKSRGTFLEARTYLEHLNPEYL 366

Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   ++    D    + +    R+NADL   + N+ SR    I K +D  + +     
Sbjct: 367 RYYYAAKLNGRVDDLDLNFEDFTNRINADLVGKVVNIASRCAGFINKRFDNRLSS----N 422

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            S+  + +    +   I E   ++   RA+  ++    +V++Y D  KPW L K     A
Sbjct: 423 LSEPQLYTDLLNMRPTIIEAYVSRDYARAIRLIMDCADKVNQYIDTHKPWVLAKEEGRLA 482

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLAN 471
               +  + + + R L   L+  +P +A 
Sbjct: 483 EVQDICTMGINLFRILMTYLKPVLPLMAQ 511


>gi|113969995|ref|YP_733788.1| methionyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130483|sp|Q0HJN6|SYM_SHESM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113884679|gb|ABI38731.1| methionyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 676

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 234/507 (46%), Gaps = 47/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I++D++  T  + +      ++ K+   G I   
Sbjct: 65  QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +      T +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--AST 446
            +        ++I E  + +   +A+ ++++L    + +     PW+L K +  +  A  
Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEVAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
           V    + + R L   L+  +P+LA  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|193212895|ref|YP_001998848.1| methionyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086372|gb|ACF11648.1| methionyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 703

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 233/521 (44%), Gaps = 55/521 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G DV+   G+DEHG  I   A 
Sbjct: 6   QRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLCGHDVIHIGGSDEHGVPITITAD 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  VD+  +   D      IS+D + RT+   HH+T R  + +I  KG   K  
Sbjct: 66  KEGISPQDVVDRYHKMNADAFARCGISFDYYGRTSGPVHHETAREFFSEIEKKGIFVKKT 125

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEG-------- 164
              ++  +   + +D  +          GA+G   +      +P + ++ +         
Sbjct: 126 EKQFFDPKAGRFLSDRYITGTCPVCKTPGANGDQCEQCGTHLSPTELIDPKSKLSDATPE 185

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214
                 ++F L  YQ +L ++ E H       + R+ V+++ ++    GL D +++R  F
Sbjct: 186 LRETLHWYFPLGRYQKQLEAFVERHTG-----DWRSNVVNYSRTWLNQGLADRAITRDLF 240

Query: 215 DWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LHVI 263
            WGI +P D +     ++YVW DA+  Y++ T       G      ++W       ++ I
Sbjct: 241 -WGISLPLDSEEAKGKVLYVWFDAVLGYISFTKEWAEKQGDSELWRRYWQDPETRIINFI 299

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   E 
Sbjct: 300 GKDNVVFHTLMFPAILMAWNEGRSEGRYELADNVPASEFMNFEGRKFSKSRNYAVYLGEF 359

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E    D LRY +       KD  +     + R N +LA+ +GN + RS+      + G 
Sbjct: 360 LERFPADTLRYSIAMNYPENKDTDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSRFGGE 419

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P        D   +   +    ++    +      A AQ + +    +RY    +PW++
Sbjct: 420 VPADIDLEAWDGLGIDWLAS-FGKLEAAYEGFHFREATAQAMEIARFANRYLTESEPWKV 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K +P+ A   + V++ +   LA+L    VP+ AN+I+ +L
Sbjct: 479 IKVDPEAAGRTMAVSLNLCHTLALLFWPIVPETANRIWKML 519


>gi|254481396|ref|ZP_05094641.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038559|gb|EEB79221.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 704

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 227/511 (44%), Gaps = 61/511 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E +  D+  RF R  G D L+    D HG  I  AA+  
Sbjct: 30  KILVTSALPYANGPLHLGHMLEQVQTDIWVRFQRSRGHDCLYVCADDAHGTAIMLAAEKL 89

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++    R+  D +  L I + +F  T  + +      ++ ++     I     
Sbjct: 90  GITPEQHIESMRERHMHDSSGFL-IDFANFYSTHTEENRKWSEDIYGRLKANNHIASRTI 148

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           +  +    E +  D    KG      A+ QY        A ++P   +            
Sbjct: 149 TQAFDPEKELFLAD-RFIKGTCPRCKAEDQYGDNCESCGATYSPSDLIDPVSAISGATPV 207

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  FF+L  ++  L  + +S     L  +  N++  +  +GL++  +SR    +G 
Sbjct: 208 DKESKHLFFKLPEFEAMLKQWLDSD---TLQPQVANKLREWTDAGLQEWDISRDAPYFGF 264

Query: 219 KIPDDPQYIMYVWIDA-------LTNYLTTTG-----YLDNPDGSKAKFWPADLHVIGKD 266
           +IP +     YVW+DA         NY   TG     Y++ P G    +     H IGKD
Sbjct: 265 EIPGETGKYFYVWLDAPIGYIASFDNYCQRTGHNFDEYIE-PGGDTELY-----HFIGKD 318

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH ++WPA L SA L  P  +F+HGF+   G K+SKS G  I+    +E +  + LR
Sbjct: 319 IINFHGLFWPAMLHSAGLRTPTAIFAHGFLTVNGTKMSKSRGTFINASTYLEHLDAEYLR 378

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +++   D    + D   +RVN+D+   + N+ SR    + K +D  +    A  +
Sbjct: 379 YYYAAKLSNSVDDIDLNTDDFTQRVNSDVVGKVVNIASRCAGFLRKGFDNTLSPECAEPQ 438

Query: 386 SDESILSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
                ++    +  L E RE       ++A+ ++I+L    ++Y D +KPW L K    +
Sbjct: 439 LLADFIAAGDNIAALYEQRE------FNKAIREIIALADRANQYIDDKKPWVLVKEEGQK 492

Query: 444 AS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
           A    V  V + + R L   L+  +P +A K
Sbjct: 493 AEVHAVCSVGINLFRVLMTYLKPVLPAMAAK 523


>gi|110799452|ref|YP_697210.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209761|ref|ZP_02635386.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|110674099|gb|ABG83086.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170712061|gb|EDT24243.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 514

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 228/489 (46%), Gaps = 29/489 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H +  + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEEQVKYIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     +++ GL+D  L+R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   IGN  +R ++ I K+++G I       E      ++  R    +    +      
Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNIIRRTYASVGNKFEEGEFKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVAD 481
           I   L + D
Sbjct: 466 IKMFLGIKD 474


>gi|257076299|ref|ZP_05570660.1| methionyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 721

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 242/527 (45%), Gaps = 46/527 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           EREK+ ++ A+ Y N   H+GH A   + AD+  RF+R+ G +VLF +G+DE+G  I  +
Sbjct: 22  EREKILVNCALPYANGPLHLGHIAGAYLGADIFVRFNRMSGNEVLFISGSDEYGTPITIS 81

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   V  +   D+      +  + LDI +D F RT++  H       +  + +KG + K
Sbjct: 82  AEKNHVPPQEIADKYHIEQINSFNSLDIIFDKFTRTSDPEHVKDVDEFFINLLEKGYLVK 141

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME--- 161
                 + +    +  D  +        YK A G Q  N           NPV  M    
Sbjct: 142 RYMISPFCVEINKFMPDRYIEGECPYCGYKEARGDQCDNCGQTLDPIELINPVCKMTGNS 201

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 + +F +L + Q+KL  + +S   +   + +  +  +F+  GL   +++R   DW
Sbjct: 202 PIFKVTDHFFLKLDSLQEKLSEFIDSKTYWRPNVLKFTQ--NFIGEGLHPRAITRD-LDW 258

Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--------ADLHVIGKD 266
           G+KIP        +YVW +AL  Y+T         G K ++W            + IGKD
Sbjct: 259 GVKIPLKGYENKKIYVWFEALIGYITGARVYSEETG-KPEYWKEFWMDKNIKSYYFIGKD 317

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            + FH I WPA LL+     LP  V ++ ++  +GEK SKS G      E+++ V  ++L
Sbjct: 318 NIPFHTIIWPAMLLAHGGFNLPYNVPANEYLRFEGEKFSKSRGIGFTVDEMLKFVDKNSL 377

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFT 384
           RY++   +    D  +  +  + +VN++L +  GN + R  S I K  +G+ P  P    
Sbjct: 378 RYYMASVLPETGDSDFSMNEFQLKVNSELIDKYGNYIYRVESFIKK--NGLSPHEPETMD 435

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D  ++        E    +    I R ++  + +V   + YF    PW+L K + ++ 
Sbjct: 436 TKDMEMMKFLEDKFSEYSMEVSGIHIKRGISIWLEIVMAANNYFTESAPWKLIKEDTEKL 495

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSL 489
           +  LYV++++ + L  +L  +VP  +  I+    V++  EN  F  +
Sbjct: 496 NEKLYVSLKIGQYLTAMLYPYVPSASESIWQTFGVSENLENATFNDV 542


>gi|91782348|ref|YP_557554.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123063115|sp|Q143I7|SYM_BURXL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91686302|gb|ABE29502.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 710

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 225/515 (43%), Gaps = 45/515 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I    
Sbjct: 76  KEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDARD 135

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161
               Y    E +  D     E  K GA  QY ++              NP   +      
Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGATPV 195

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  ++  +    +   E  N++  ++    ++ L D  +SR   
Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSKAEQYHFIGKDIL 313

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VIE  +  + LRY
Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIETGLNPEWLRY 373

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
              +L+     + +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N    
Sbjct: 430 QHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGVAL 489

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                V++E  R L++ L+  +PKLA  +   L +
Sbjct: 490 HETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLAI 524


>gi|296162307|ref|ZP_06845101.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295887461|gb|EFG67285.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 710

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 225/515 (43%), Gaps = 45/515 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I    
Sbjct: 76  KEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDARD 135

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161
               Y    E +  D     E  K GA  QY ++              NP   +      
Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGATPV 195

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  ++  +    +   E  N++  ++    ++ L D  +SR   
Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSKAEQYHFIGKDIL 313

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VIE  +  + LRY
Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIETGLNPEWLRY 373

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
              +L+     + +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N    
Sbjct: 430 QHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGVAL 489

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                V++E  R L++ L+  +PKLA  +   L +
Sbjct: 490 HETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLAI 524


>gi|114047230|ref|YP_737780.1| methionyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944730|sp|Q0HVY2|SYM_SHESR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113888672|gb|ABI42723.1| methionyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 676

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 233/504 (46%), Gaps = 47/504 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I++D++  T  + +      ++ K+   G I   
Sbjct: 65  QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +      T +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            +        ++I E  + +   +A+ ++++L    + +     PW+L K +   + A  
Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470
           V    + + R L   L+  +P+LA
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLA 498


>gi|153839838|ref|ZP_01992505.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746645|gb|EDM57633.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 499

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 216/495 (43%), Gaps = 46/495 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 72  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L N   D    ++W  D      H IGKDI+ FH++
Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   ++
Sbjct: 309 FWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               D    + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428

Query: 393 VCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
              R+ +  E RE        RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 429 AADRIAELFEARE------FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEIC 482

Query: 449 YVTVEVIRQLAILLQ 463
            V + + R L   L+
Sbjct: 483 SVGINLFRVLMTYLK 497


>gi|33595447|ref|NP_883090.1| methionyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|68565998|sp|Q7W1D8|SYM_BORPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33565525|emb|CAE40164.1| methionyl-tRNA synthetase [Bordetella parapertussis]
          Length = 692

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 248/553 (44%), Gaps = 59/553 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117
           +T +  V + +       D   I +D +  T    +    + +++ +  +G         
Sbjct: 65  ITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSIEQ 124

Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P + +               
Sbjct: 125 FYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVLKS 184

Query: 162 EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR 211
            + +FF+LS      +  +  +         L  E + +   ++     ++ L D  +SR
Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLGGDDGEAKLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPA----DLHVIGK 265
               +GI+IPD P    YVW+DA   YL +        G    A   PA     +H IGK
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAAKGLDFDALLDPAGPTEQVHFIGK 304

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
           DI+ FHA++WPA L  A    P ++  HGFI   GEK+SKS G  I P+  + E+G+DA 
Sbjct: 305 DIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYL-EIGMDAE 363

Query: 325 -LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ + I + +DG +    A
Sbjct: 364 WLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGEL----A 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---- 438
           +    +++ +  ++  + IR   + +  +RA+ ++++    +++ FDA +PW + K    
Sbjct: 420 YDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGIGA 479

Query: 439 ---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQR 492
                  R   +    +   + L+++L   +P LA+++   LF A+ +  +   Q L QR
Sbjct: 480 ADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLPQR 539

Query: 493 LKPGFMLHKTFDP 505
           + P   L +  DP
Sbjct: 540 VAPFKHLMQRVDP 552


>gi|229916147|ref|YP_002884793.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467576|gb|ACQ69348.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 547

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 227/511 (44%), Gaps = 43/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G DVL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWVYANGSLHLGHISSLLSGDILARYYRSKGEDVLYVSGSDCNGTPITVRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+     D+    F      L  SYD + RT   +HH+  + ++ ++  KG IYK     
Sbjct: 63  VSVTEIADRYHDEFVACYSSLGFSYDVYARTDHSQHHEVVQDIFAELYSKGFIYKKEVEQ 122

Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME--------------E 162
            Y    + +  D  V           +G    + +    P+  +E               
Sbjct: 123 AYCETCDQFLPDRYVEGTCPVCHGPSRGDQCDHCSTILEPLDLLEPRCKHCLNEPSTRST 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK----SGLKDLSLSRKTFDWGI 218
           E ++F LS++Q  L  Y E+     L    R   IS  K     GL D ++SR     G+
Sbjct: 183 EHFYFSLSSFQKFLEKYTENADRQSL---WRENAISLTKRYLQEGLHDRAVSRD-LSTGV 238

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADL---HVIGKDILRFHA 272
            IP     +  +YVWI+A++ Y + +       G+ +A FW       +V GKD + FH+
Sbjct: 239 NIPILGYEEKKVYVWIEAISGYYSASRLWAQSVGADEATFWSNTTRAYYVHGKDNIPFHS 298

Query: 273 IYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I WPA L +  +  LP  + S+ ++  +  K+S S    +   +++E    D++RYFL  
Sbjct: 299 IIWPAILEALGDKALPTHIVSNEYLTLEKRKLSTSRNWAVWLPDMLERYEPDSIRYFLTI 358

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +         NA+L    GN V+R++  I K +D  IP     +E +E I 
Sbjct: 359 NAPENRDADFSWKEFIYSHNAELLGAYGNFVNRTLKFIEKSFDHSIPNDNISSEIEERI- 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              S +  E+ + +++    +AL  +   +   ++YFD  +PW   K NP      L   
Sbjct: 418 ---SNLYAEVGQLIEDTNFKQALELIFEAIRFSNKYFDQTQPWNTIKENPAECRQTLADC 474

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +I     +L+ F+P  + KI D + V  E
Sbjct: 475 TFLIVNFGNVLRPFLPFSSQKIRDAIEVDKE 505


>gi|33599829|ref|NP_887389.1| methionyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|68565999|sp|Q7WP45|SYM_BORBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33567426|emb|CAE31339.1| methionyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 692

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 249/558 (44%), Gaps = 69/558 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117
           +T +  V + +       D   I +D +  T    +    + +++ +  +G         
Sbjct: 65  ITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSIEQ 124

Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P + +               
Sbjct: 125 FYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVLKS 184

Query: 162 EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR 211
            + +FF+LS      +  +  +         L  E + +   ++     ++ L D  +SR
Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLGGDDGEAKLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWPADL 260
               +GI+IPD P    YVW+DA   YL +              L +P G   +     +
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPAGPTEQ-----V 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L  A    P ++  HGFI   GEK+SKS G  I P+  + E+
Sbjct: 300 HFIGKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYL-EI 358

Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G+DA  LRY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ + I + +DG +
Sbjct: 359 GMDAEWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGEL 418

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A+    +++ +  ++  + IR   + +  +RA+ ++++    +++ FDA +PW + 
Sbjct: 419 ----AYDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMA 474

Query: 438 K-------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---Q 487
           K           R   +    +   + L+++L   +P LA+++   LF A+ +  +   Q
Sbjct: 475 KGIGAADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQ 534

Query: 488 SLDQRLKPGFMLHKTFDP 505
            L QR+ P   L +  DP
Sbjct: 535 QLPQRVAPFKHLMQRVDP 552


>gi|315223783|ref|ZP_07865632.1| methionine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946229|gb|EFS98229.1| methionine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 688

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 226/510 (44%), Gaps = 47/510 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+  G 
Sbjct: 7   ITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAKKEGT 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  +D+     +       IS+D++ RT+   HH T    +KK+ ++GD  +      
Sbjct: 67  TPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEISEQL 126

Query: 128 YSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y      +  D  V     K  + + Y  Q       E  G     +   D   S   S 
Sbjct: 127 YDEEAHQFLADRFVIGTCPKCGNPEAYGDQ------CERCGSSLNATDLIDPKSSITGSK 180

Query: 184 P------EFILPIERRNE-----------------VISFVKSGLKDLSLSR---KTFDWG 217
           P       + LP+ R  E                 V   VKS L D    R   +  DWG
Sbjct: 181 PTLKATKHWFLPLNRYQEFLEQWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRDLDWG 240

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + F
Sbjct: 241 IPVPIEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDSDTQLVHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA L +  +  LP  V ++ F+  +  K+S S    +   E +++     D LRY
Sbjct: 301 HCIIFPAMLKAEGSFILPANVPANEFLNLESNKLSTSKNWAVWLHEYLQDFPNQQDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN ++R   +  K Y+G++P    +   D
Sbjct: 361 VLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVVPQADTYNNVD 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              L   + +  +I ++++      A  +++++    ++Y   ++PW+L KT+P+R  TV
Sbjct: 421 TETLRQITELTDKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTV 480

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +Y+ +++   LA+  + F+P  + K+  +L
Sbjct: 481 MYIALQIATALAVASEPFLPFTSEKLKRML 510


>gi|288926899|ref|ZP_06420799.1| methionine--tRNA ligase [Prevotella buccae D17]
 gi|288336338|gb|EFC74719.1| methionine--tRNA ligase [Prevotella buccae D17]
          Length = 686

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 249/542 (45%), Gaps = 51/542 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+  +  ++  +   IS+D + RTT K H       ++K+ D G + 
Sbjct: 63  RAKKEGITPQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGKLV 122

Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y            +  E  +  +E   G   +   +  +P++ +         
Sbjct: 123 EKETEQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  + H E+      R  V    KS L D+ L  +  
Sbjct: 183 KPVVRKTKNWYLPLNDYQGWLKQWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 235

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L + +    GS  K+W  +    +
Sbjct: 236 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDREPEKWGSWEKWWKDEDTRLI 295

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +     LP  V ++ F+  + +KIS S    +   E + E
Sbjct: 296 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLRE 355

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++
Sbjct: 356 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWDGVV 415

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E D+  +     V +++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 416 PACGELLEVDQQTIHEFKDVQEKVEGYLDAFKFREAQKEAMNLARIGNKYITECEPWKVW 475

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           KT+P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LKPG 
Sbjct: 476 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSRLGTTDLLKPGH 535

Query: 498 ML 499
            L
Sbjct: 536 QL 537


>gi|117621300|ref|YP_856757.1| methionyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|187645704|sp|A0KKF6|SYM_AERHH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117562707|gb|ABK39655.1| methionyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 677

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 223/502 (44%), Gaps = 43/502 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  G
Sbjct: 8   MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFVCADDAHGTPIMLKAQQLG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S+  +      +IS+D++  T    + +   +++ ++   G I     S 
Sbjct: 68  ITPEEMIAAVSKEHQADFAGFNISFDNYHSTHSDENRELAELIYGRLQAGGKIKSRTISQ 127

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------- 161
            +   +++ +  D   KG      +  QY        A ++P + ++             
Sbjct: 128 LFD-PEKSMFLPDRFVKGTCPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGATPVMK 186

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E +FF L  ++  L  +        +  E  N++  + +SGL+   ++R    +G +I
Sbjct: 187 DSEHFFFDLPQFEKWLAEWVRG--SGAIQEEMANKMQEWFESGLQQWDITRDAPYFGFEI 244

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P  P    YVW+DA   Y+ +   L N   D     +W AD      H IGKDI  FH +
Sbjct: 245 PGAPGKYFYVWLDAPIGYMASFKNLCNKRRDIDFDSYWKADSEAELYHFIGKDIAYFHCL 304

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WP+ L  A    P KV  HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 305 FWPSMLEGAGFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKL 364

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + D    RVNAD+ N + NL SR+   I K +DG +    A T ++  + +
Sbjct: 365 NSRIDDLDLNLDDFVARVNADVVNKLVNLASRNAGFIAKRFDGKL----AATCAEPELYA 420

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
             +     I E  +++   RA+ ++++L  + +RY D + PW + K     A    V  V
Sbjct: 421 EFANSRTAIAEAYESREFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVCSV 480

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            + + R L   L+  +P LA +
Sbjct: 481 GINLFRVLMAYLKPVMPLLAER 502


>gi|307611755|emb|CBX01463.1| methionyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 664

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 239/541 (44%), Gaps = 53/541 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I   A+  G
Sbjct: 1   MLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIMLKAEQLG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +    +   +         I YD +  T    +      +++++   GDI K     
Sbjct: 61  ITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIVKKTIRQ 120

Query: 127 WYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM--------------E 161
           +Y    + +  D  V             G + +   A ++P   +              E
Sbjct: 121 FYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGASPVEKE 180

Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            E YFF L  Y++ L  +  + H    L  E  N++  + ++GLK   +SR    +G  I
Sbjct: 181 SEHYFFDLPRYEELLKDWTRKGH----LQTEVTNKLSEWFEAGLKQWDISRDAPYFGFPI 236

Query: 221 PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           P  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ FHA++
Sbjct: 237 PGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVYFHALF 296

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+   ++ 
Sbjct: 297 WPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYFAAKLN 356

Query: 335 CGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            G+  D   + D    RVNADL   + N+ SR    I K +D  + +     +    +LS
Sbjct: 357 -GRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKLHNDLLS 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYV 450
               V+    +   ++   RA+ Q++    +V++Y DA KPW L K  +  +    +  +
Sbjct: 416 ARESVI----DAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHAICTM 471

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK--TFDPIFP 508
            + + R L   L+  +P +A    +  F+  E   + S+D+ L    + H+  TF P+  
Sbjct: 472 GINLFRILITYLKPVLPMMAKASEE--FLNSEPLHWGSIDKPL----LNHRINTFKPLMV 525

Query: 509 R 509
           R
Sbjct: 526 R 526


>gi|117920207|ref|YP_869399.1| methionyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|187647774|sp|A0KW24|SYM_SHESA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117612539|gb|ABK47993.1| methionyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 676

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 234/504 (46%), Gaps = 47/504 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  +I++D++  T  + +      ++ K+   G I   
Sbjct: 65  QLGMAPEEMIAQVNKEHQQDFAD-FNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L   +P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKHPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +      T +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFVQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            +        ++I E  + +   +A+ ++++L    + +     PW+L K +   + A  
Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQETAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470
           V    + + R L   L+  +P+LA
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLA 498


>gi|315607117|ref|ZP_07882121.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251171|gb|EFU31156.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 686

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 249/542 (45%), Gaps = 51/542 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 3   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+  +  ++  +   IS+D + RTT K H       ++K+ D G + 
Sbjct: 63  RAKKEGITPQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGKLV 122

Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y            +  E  +  +E   G   +   +  +P++ +         
Sbjct: 123 EKETEQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  + H E+      R  V    KS L D+ L  +  
Sbjct: 183 KPVVRKTKNWYLPLNDYQGWLKQWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 235

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L + +    GS  K+W  +    +
Sbjct: 236 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDREPEKWGSWEKWWKDEDTRLI 295

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +     LP  V ++ F+  + +KIS S    +   E + E
Sbjct: 296 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLRE 355

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++
Sbjct: 356 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWDGVV 415

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E D+  +     V +++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 416 PACGELLEVDQQTIHEFKDVQEKVEGYLDAFKFREAQKEAMNLARIGNKYITECEPWKVW 475

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           KT+P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LKPG 
Sbjct: 476 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSRLGATDLLKPGH 535

Query: 498 ML 499
            L
Sbjct: 536 QL 537


>gi|261404106|ref|YP_003240347.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280569|gb|ACX62540.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 546

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 230/511 (45%), Gaps = 51/511 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   
Sbjct: 3   NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGDRVLYVSGSDCHGTPVAVQAIQE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT     D+    F +    L  SYD + RT +  HH   + L+ K+ D G +Y+    
Sbjct: 63  GVTPGDIADRFHAEFAECFAQLGFSYDLYTRTDQAFHHGVVQELFLKLLDNGHLYRKTVL 122

Query: 126 GWYSLRDEAYYNDDEVYKG-------ADGQYYNAQH-----------------NPVQWME 161
             Y   D  +  D  V          A G   +A                   NP     
Sbjct: 123 QTYCETDRRFLPDRYVEGNCPVCGSRARGDQCDACSTMLDPSDLTNRTCKICGNPPVERP 182

Query: 162 EEGYFFRLSAYQDKL---LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E ++  LS +Q +L   L+  +   +  + + RR     +++ GL+D + +R    WG+
Sbjct: 183 TEHFYVSLSHFQAELADDLNNAQGWRDNAVHMTRR-----YLEEGLQDRAATRD-LTWGV 236

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWP------ADLHVIGKDI 267
            +P    +D +  +YVWI+A++ YL+ +  +     G    FW          +V GKD 
Sbjct: 237 DVPVPGFEDKK--IYVWIEAVSGYLSASKQWAAETGGDWESFWRKGKGEVTAYYVHGKDN 294

Query: 268 LRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH + WPA L  A +L  P ++ S  ++  +G+K S S    I   +++     D++R
Sbjct: 295 IPFHTLIWPALLKGAGDLHQPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLSRYQPDSVR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+      +D  +         N +L    GNLV+R++    K +DG +P  G+   S
Sbjct: 355 YFLLANGPEKRDADFSWREFIHSHNGELLGAFGNLVNRTLVFANKSFDGKVPE-GSI--S 411

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           DE    V   + +E    ++   +  AL  + S+V + ++YFD +KPW   K +     T
Sbjct: 412 DEWQGRV-EELYREAGALIEEGRLKEALELIFSVVRQANKYFDERKPWIQVKEDRAACGT 470

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LY  + ++  LA LLQ F+P   ++I D L
Sbjct: 471 TLYTCILIMANLANLLQPFIPFSCDRIRDFL 501


>gi|229135869|ref|ZP_04264636.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228647578|gb|EEL03646.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 544

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 232/507 (45%), Gaps = 45/507 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q ++    E   +      R N +     ++K GL+D ++SR     G+ 
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ--KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  ++VWI+A+T Y + + +     G    +FW  D    +V GKD + FH
Sbjct: 240 IPVAGYEDKK--IHVWIEAVTGYYSASKHWAEETGKDDQEFWDRDAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G +P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y 
Sbjct: 418 ----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            V +I   A LL+ F+P  + ++ + L
Sbjct: 474 CVYLIANFAQLLEPFLPFSSERVRNTL 500


>gi|187923016|ref|YP_001894658.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187714210|gb|ACD15434.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 711

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 225/515 (43%), Gaps = 45/515 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPIMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I    
Sbjct: 76  KEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRILSENVYLALKEAGLIDARD 135

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161
               Y    E +  D     E  K GA  QY ++              NP   +      
Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGATPI 195

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  ++  +    +   E  N++  ++    ++ L D  +SR   
Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSTAEQYHFIGKDIL 313

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + LRY
Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWLRY 373

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
              +L+     + +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N    
Sbjct: 430 QHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGVAL 489

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                V++E  R L++ L+  +PKLA  +   L V
Sbjct: 490 HETCTVSIEAFRLLSLALKPVLPKLAEAVEGFLGV 524


>gi|282880479|ref|ZP_06289186.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305582|gb|EFA97635.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 687

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 244/520 (46%), Gaps = 51/520 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+ AR+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYARYLRLKNQEVIFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT K H       +KK+ ++G + 
Sbjct: 64  RAKKEGITPQDVVDRYHSMIKKSFEEFGISFDVYSRTTSKTHEQLASDFFKKLLEEGKLQ 123

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM--------- 160
           +     +Y      +  D  +        Y GA G   ++     +P++ +         
Sbjct: 124 EQESEQYYDEEAHQFLADRYIKGECPHCHYDGAYGDQCEHCGTALSPLELINPTSTLSGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  + H E+      R+ V    KS L DL L  +  
Sbjct: 184 KPVIKKTKNWYLPLNDYQQWLKEWILQGHKEW------RSNVYGQCKSWL-DLDLQPRAM 236

Query: 214 ---FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L    P+  GS  K+W  +    +
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEQAPERWGSWEKWWKDEDTRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH + +P  L +     LP  V ++ F+  + +KIS S    +   E + +
Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLENDKISTSRNWAVWLHEYLVD 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++  N++L    GN V+R++ +  K ++G++
Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQEHNNSELVGIYGNFVNRALQLTKKYFEGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D+  L     V Q++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 417 PACGELLDIDKQTLEEFKDVKQKVETLLDAFRFRDAQKEAMNLARIGNKYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           KTNP+R  T+LYV+++++  LAI  + F+P  + K+  ++
Sbjct: 477 KTNPERVKTILYVSLQLVANLAIAFEPFLPFSSKKLRQLI 516


>gi|108805422|ref|YP_645359.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|122975770|sp|Q1AST1|SYM_RUBXD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|108766665|gb|ABG05547.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 577

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 232/526 (44%), Gaps = 59/526 (11%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGH---AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ 56
           M ER + Y +++A+ Y N   H+GH   AY  + AD+  R+ R+ G DV++  GTDEHG 
Sbjct: 7   MSERSERYLVTSALPYANGPLHVGHMVGAY--LPADIFVRYLRMRGEDVVYVCGTDEHGV 64

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
            I   A+  G + +  VD    + ++      IS+D+F RT+   H    ++ ++K+ + 
Sbjct: 65  PITLTAEREGKSPREVVDYWYAHMKETFARFSISFDNFSRTSTPLHAQNTQLFYRKLKEG 124

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-------QYYNAQH------- 154
           G I +      YS  +  +  D  V        YK A G        +Y A         
Sbjct: 125 GYISEAESKQMYSPTEGRFLPDRYVEGTCPVCGYKEARGDQCDNCGSWYEAYELIEPHSK 184

Query: 155 ---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
               PV+       +  L  +  +L  +  S   +  P+  +N +IS ++ GL+   ++R
Sbjct: 185 ITGGPVEVRTTTHLYLDLPKFAGRLKDWISSQRHWREPV--KNFIISMIEGGLERRPITR 242

Query: 212 KTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAK---FW--PAD--LH 261
               WG+ +P+ P +     YVW DA   Y+++T       G   +   +W  P    +H
Sbjct: 243 D-ISWGVPVPE-PGFEDKRFYVWFDAPIGYVSSTQEWAERTGEPDRWREYWQDPGTRLIH 300

Query: 262 VIGKDILRFHAIYWPAFLLSAN--------LP--LPKKVFSHGFILHKGEK----ISKSL 307
            IGKD   FH   WPA L+           LP  +P   F +  +  +GE+    +S S 
Sbjct: 301 FIGKDNTVFHTTMWPAMLMGVAEDGEEPYILPYDVPANEFMNLEVPVEGERRAVQMSTSR 360

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
              +   E ++    D LR++L   +    D  +     + RVN+DL   +GN ++R +S
Sbjct: 361 NLAVWLHEALDRFPADPLRFYLASTLPETGDVVFSWREFQSRVNSDLIGNLGNYINRVLS 420

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
              + + G +  P     + +        + +     M ++    A A++++L    +R+
Sbjct: 421 FTERYFGGTLERPSRLPAAAQEAFEDFRALEESYGRKMLDERPREAFAELLALGRRANRF 480

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           FDA  PW+ +K +P+RA   LY    ++  +A     +VP+   ++
Sbjct: 481 FDAAAPWKTRKEDPERARADLYACCALLGSIAYHASPYVPEAMERL 526


>gi|115352535|ref|YP_774374.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322486|sp|Q0BCT3|SYM_BURCM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115282523|gb|ABI88040.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 720

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 223/516 (43%), Gaps = 45/516 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAERA 136

Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161
               Y    E +  D     E  K       G + +   + + P + +            
Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  S+       +   E  N++  ++    ++ L D  +SR   
Sbjct: 197 RKTSTHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKDIL
Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY
Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
           +  +++     +  I  + + +   RAL   + L  EV+ Y D  KPWEL K   N    
Sbjct: 431 NHPLVAKLRDAIASIAAHYEGREYSRALRHTMELADEVNAYVDGAKPWELAKDPANAVAL 490

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                V++E  R L++ L+  +P++A  +     VA
Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526


>gi|298373027|ref|ZP_06983017.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275931|gb|EFI17482.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 684

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 239/509 (46%), Gaps = 43/509 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+ Y N   HIGH A   + AD+ AR+ R  G +V+F  G+DEHG  I   A+  GV
Sbjct: 8   ITTALPYANGPVHIGHLAGVYVPADIYARYLRNKGEEVVFIGGSDEHGVPITIKARKEGV 67

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     +   +   IS+D + RTT K H+      +KK+ DKG+  +     +
Sbjct: 68  TPQDIVDRYHEIIKRSFEEFGISFDVYSRTTSKTHYRVASYFFKKLYDKGEFIEQTSEQY 127

Query: 128 YSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWMEEEG------------ 164
           Y      +  D           +E   G   +      +P   +  +             
Sbjct: 128 YDEEAGQFLADRYITGKCPHCGNERAYGDQCESCGTSLSPTDLINPQSAISGSKPVMRQT 187

Query: 165 --YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             ++  L  ++  L  Y   +H E+   +    +  S++  GL+  ++SR   DWG+ +P
Sbjct: 188 RHWYLPLDKHEAWLRDYILNNHKEWKTNV--YGQCKSWLDVGLQPRAVSRD-LDWGVPVP 244

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----LHVIGKDILRFH 271
             D    ++YVW DA   Y++ T  L  + P+  G+  ++W       +H IGKD + FH
Sbjct: 245 LPDAEGKVLYVWFDAPIGYISNTIELCSEKPEKFGNWERWWKDPETRLVHFIGKDNIVFH 304

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYF 328
            I +PA L +  +  LP  V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 305 CIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLVDMPDKQDVLRYV 364

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N++L +  GN ++R++ +  K +DG +P  G   + D 
Sbjct: 365 LTANAPETKDNDFTWRDFQVRNNSELVSIYGNFINRTLVLTGKYFDGKVPPRGTLEDIDS 424

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L+  +    +I + + N     AL + ++L    ++Y    +PW+L KT+ +R +T+L
Sbjct: 425 DVLAQIADSKAKIEQLLDNFHFRDALREAMNLARTGNKYLADTEPWKLAKTDMNRVATIL 484

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V +++   L I  + F+P  + K+  +L
Sbjct: 485 NVALQLSANLNIAFEPFLPFSSAKLRQML 513


>gi|307728927|ref|YP_003906151.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583462|gb|ADN56860.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 719

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 225/516 (43%), Gaps = 47/516 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I    
Sbjct: 76  MEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEARD 135

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME----- 161
               Y    E +  D     E  K GA  QY ++              NP   +      
Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTDLVNPYSVVSGATPV 195

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR   
Sbjct: 196 RKTSTHYFFRLS--DPRCENFLREWVGGLAQPEATNKMREWLGDAGEARLADWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAQKRGLDFDAWVRPGSKAEQYHFIGKDIL 313

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     IE  +  + LRY
Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSFIETGLNPEWLRY 373

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
              +L      L +I  N + +  +RAL Q + L   V+ Y D  KPW+  K +P  A  
Sbjct: 430 QHPLLVTLRAALGQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAK-DPANAVA 488

Query: 447 V---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +     V++E  R L+I L+  +PKLA  +   L V
Sbjct: 489 LHETCSVSIEAFRLLSIALKPVLPKLAEAVEAFLGV 524


>gi|92114242|ref|YP_574170.1| methionyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123084023|sp|Q1QVN7|SYM_CHRSD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91797332|gb|ABE59471.1| methionyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 681

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 218/509 (42%), Gaps = 43/509 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I   A+
Sbjct: 8   KRKILVTSALPYANGSIHLGHLLEYIQTDIWVRFQKSRGHECHYVCADDAHGTAIMLRAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  + + S   +       +++D++  T  + +      ++  + D G I    
Sbjct: 68  QEGITPEQLISKVSAEHQADFARFGVAFDNYYSTHSEENRQHSERIYTALRDAGHISTRD 127

Query: 124 YSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME----------- 161
               Y      +  D  +       GA  QY        A + P + ++           
Sbjct: 128 IEQMYDPVKGLFLADRFIKGTCPKCGAGDQYGDNCEACGATYTPAELIDPVSAISGATPE 187

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +FF+L  + D +  + +     + P + RN+++ + +SG  +  +SR    +G 
Sbjct: 188 VRSSTHFFFKLPDFADFMQGWIDGG--HVQP-QIRNKLLEWFESGFNEWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   YL +   L   +G     +W  D      H IGKDI+ FHA
Sbjct: 245 EIPDAPGKYFYVWLDAPIGYLASFQNLCEREGIDFDSYWRRDSDAEVYHFIGKDIVYFHA 304

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A L  P  V  HGF+   G K+SKS G  I      E +  + LRY+   +
Sbjct: 305 LFWPAMLEGAGLRTPTGVNCHGFVTVNGAKMSKSRGTFIKAQTYAEYLNPEYLRYYFAAK 364

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +  G D    + +    RVNADL   + N+ SR    + K   G +    A  E    ++
Sbjct: 365 LTAGVDDLDLNLEDFASRVNADLVGKVVNIASRCAGFVKKLGAGRLAAHCAEPE----LV 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL--- 448
           +      + I  + + +   RA+ +V+ L  E + Y   + PW L K    R   VL   
Sbjct: 421 TRFVEAGEAIAADYEAREFARAMRKVMDLADEANAYIADKAPWVLAKEE-GREQEVLDIC 479

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V + + R L + LQ  VP +A +  D L
Sbjct: 480 SVGINLFRILMVYLQPVVPAMAEQARDFL 508


>gi|189502608|ref|YP_001958325.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498049|gb|ACE06596.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 557

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 247/532 (46%), Gaps = 48/532 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+ A+ Y N   HIGH A   I AD+ AR+ R    +V+F +G+DEHG  I   AQ  G+
Sbjct: 12  ITAALPYANGPIHIGHLAGVYIPADIYARYLRSKKKEVIFISGSDEHGVPITIRAQQEGI 71

Query: 68  TTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           T +  VD+    N +N +D    L IS+D F RT+ + HH T    +  + +KG +    
Sbjct: 72  TPQQIVDKYHHLNKQNLQD----LGISFDIFSRTSSEVHHQTASDFFTTLYNKGILIAKE 127

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEG-------- 164
              +Y      +  D  +        Y  A G   +      +P + ++           
Sbjct: 128 TEQYYDPASHQFLADRYIRGTCPKCGYTDAYGDQCEVCGTTLSPEELIDPRSALSGETPI 187

Query: 165 ------YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                 ++  L  Y++ L  +  E+H ++   +    +  S+++ GL+  +++R   DWG
Sbjct: 188 LKATKHWYLPLDKYENWLKHWILETHTDWKSNV--YGQCKSWLEQGLQPRAVTRD-LDWG 244

Query: 218 IKIPDDPQY--IMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           + +P    Y  ++YVW DA   Y++ T  +    + +   FW       +H +GKD + F
Sbjct: 245 VPVPLPEAYHKVLYVWFDAPIGYISATKEWAIENNQNWEPFWKDSTTKLVHFVGKDNIVF 304

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRY 327
           H I +P  L +     LP++V ++ F+   G KIS S  + +   E +E      D LRY
Sbjct: 305 HCIIFPVMLQAHEGYILPEQVPANEFMNLAGGKISTSRNHAVWLHEYLENFKGQQDVLRY 364

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + + N +L   +GN V+R++ +I K Y G++P   +   +D
Sbjct: 365 VLCVNAPEAKDSDFTWQDFQAKNNNELVATLGNFVNRTLVLIQKYYAGIVPEMTSLIHTD 424

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           ++I+         I ++++      A+ + + L    ++Y     PW L KT P++  T+
Sbjct: 425 QAIIIQMQEAADSIGQSIEKYRFKEAIQKWMDLARAGNKYLADTAPWHLIKTMPEQVQTI 484

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           L +++++   +AIL   F+P  + K+  +L + + +       + +KPG +L
Sbjct: 485 LNISLQLTAHIAILGAPFLPFTSQKLSQMLLLDNLDWDNAGSMEIIKPGTLL 536


>gi|228923768|ref|ZP_04087046.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835897|gb|EEM81260.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 544

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 237/513 (46%), Gaps = 45/513 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD +  T  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFHDLGFTYDCYTHTASEHHHETVQNVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
           E ++F L  +Q+++    E   +      R N +     +VK GL D ++SR     G+ 
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQ--TGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVP 239

Query: 220 IP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRFH 271
           IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + FH
Sbjct: 240 IPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGKDDQEFWDSEAKTYYVHGKDNIPFH 297

Query: 272 AIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ WPA LL       P+ + S+ ++  +  K+S S    +   +++E    D++RYFL 
Sbjct: 298 SVIWPAVLLGIGEGASPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLT 357

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N++L    GN V+R++  I K Y G++P      E  + +
Sbjct: 358 VNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVELKDKV 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P     ++Y 
Sbjct: 418 ----EGLYKYVGEAIEQTQFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEEMIYN 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V +I   A LL+ F+P  + ++ + L +   N
Sbjct: 474 CVYLIANFANLLEPFLPFSSERVRNTLSIVKRN 506


>gi|325954554|ref|YP_004238214.1| methionyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437172|gb|ADX67636.1| Methionyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 678

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 248/540 (45%), Gaps = 45/540 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    +  I+ A+ Y N   HIGH A   + +D+ AR+ R  G DV F  G+DEHG  I 
Sbjct: 1   MSNTNRYTITAALPYANGPLHIGHMAGVYVPSDIFARYLRRKGKDVAFIGGSDEHGIPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+N GVT +  VD+   N ++  +   +++D + RTT  +H +  +  +K +      
Sbjct: 61  IRAKNEGVTPQDIVDKYHENIKNTLESFGVTFDVYSRTTSAKHREVAQDFFKTLYQNSKF 120

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ---------------------- 153
            +     +Y    + +  D     E  K  +   Y  Q                      
Sbjct: 121 TEEVTEQYYDEEAKEFLADRYIRGECPKCGNPDAYGDQCEKCGSTLSPEELINPRSALSG 180

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           + P++  E + ++  L  YQD L  +     +         +V S++  GLK  +++R  
Sbjct: 181 NTPIK-RETKNWYLPLDQYQDFLKDWILLGHKEDWKSNVYGQVKSWLDDGLKPRAMTRD- 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKD 266
            +WGI +P D     +MYVW DA   Y++ T      +G   K +W       +H IGKD
Sbjct: 239 LNWGIPVPIDGTEGKVMYVWFDAPIGYISFTQEWAEKNGKDWKDYWQNPETKLVHFIGKD 298

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH I +P+ L +     LP  V ++ F+  + +KIS S    +   E +E+     D
Sbjct: 299 NIVFHCIVFPSMLKAHGEYILPDNVPANEFLNLEDDKISTSRNWAVWAHEYLEDFPNQQD 358

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR+ L   +   KD  +     + + N++L   +GN ++R + +  K YDG+IPT    
Sbjct: 359 TLRFVLTSNMPENKDNNFTWKDFQTKNNSELVGILGNFINRVMVLTHKYYDGIIPTK--- 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           T S + +L +     + I E++++     AL + ++L    +++  AQ+PW+ K  +P+ 
Sbjct: 416 TSSFDEVLQI-KEYAKRIGEHIEHYEFRAALHEYMNLARLGNQFLQAQEPWK-KANDPEA 473

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLKPGFMLHKT 502
              ++Y   ++   LA L + F+P  + K+ D++ V  +N     + D+ ++ G  L +T
Sbjct: 474 VKNIMYAANQIAVALAQLAEPFLPFSSTKMLDMMKVELKNWDDLIATDEWIESGHQLGET 533


>gi|29348342|ref|NP_811845.1| methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569289|ref|ZP_04846699.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|68566005|sp|Q8A3M1|SYM_BACTN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29340246|gb|AAO78039.1| Methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841308|gb|EES69389.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 679

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 242/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   +   +S+D + RTT K HH+     +K + +KG+  
Sbjct: 63  RAKKEGVTPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     LH I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLLHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +E+   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +D  +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDSKVPAC 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
              T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 AELTDYDKETLKEFANVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|60683709|ref|YP_213853.1| methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313244|sp|Q5L7I8|SYM_BACFN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|60495143|emb|CAH09964.1| putative methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 679

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 241/514 (46%), Gaps = 45/514 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+ K HH+     +KK+ +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y      +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 183 KPVM-KETKHWYLPLDKHETWLRQWILEEHKEWRPNV--YGQCKSWLDMGLQPRAVSR-D 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLVHFIGKD 295

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +E+     D
Sbjct: 296 NIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G  
Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGEL 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            + D+  L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R
Sbjct: 416 IDYDKETLKEFSDVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             T+L ++++++  LAI  + F+P  + ++  +L
Sbjct: 476 VGTILNISLQLVANLAIAFEPFLPFSSERLRQML 509


>gi|221199339|ref|ZP_03572383.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205759|ref|ZP_03578774.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174597|gb|EEE07029.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180624|gb|EEE13027.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 719

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 47/510 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +++     +   D   +S+D+F  T  + +      ++  + D G I +  
Sbjct: 69  KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 129 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                + YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGIDFDAWIRAGSSAEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPWEL K   N   
Sbjct: 422 MNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 V++E  R L++ L+  +P++A  +
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAEAV 511


>gi|89073403|ref|ZP_01159927.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050890|gb|EAR56364.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 681

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 231/527 (43%), Gaps = 53/527 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + + S+  +      DI + ++  T    + +    ++ ++ D   I     S
Sbjct: 67  GMEPEQMIAEVSKEHQTDFAGFDIDFSNYHSTHSPENRELASFVYTQLKDNRFITSRTIS 126

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQHN---------------------PVQ 158
             +    E +  D  V KG      A+ QY +   N                     PV 
Sbjct: 127 QLFDPEKEMFLPDRFV-KGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 186 -KDSEHFFFDLPQFESMLKEWTKSG---ALQEETSNKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +   D +  +FW  D      H IGKDI+ FH
Sbjct: 242 EIPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 SLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYYAA 361

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    D    + +   +RVN+D+ N I NL SR+   I K +DG +       E     
Sbjct: 362 KLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEF 421

Query: 391 LSVCSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
           ++   R+  L E RE        RA+ ++ +L  + ++Y D + PW + K          
Sbjct: 422 VAAADRIGELYESRE------YGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +  V + + R L   L   +PKL  +    L   +E   +++++Q L
Sbjct: 476 ICTVGINLFRVLMAYLIPVMPKLTERSEAFL---NETLTWETIEQPL 519


>gi|94498900|ref|ZP_01305438.1| Methionyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428532|gb|EAT13504.1| Methionyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 681

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 241/550 (43%), Gaps = 65/550 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I   AQ  
Sbjct: 3   RILVTSALPYANGPIHLGHMLEYIQTDIWVRFQQARGNECHYVCADDAHGTAIMLRAQKM 62

Query: 66  GVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GVT   ++   Q +   +D +D + I +D++  T  + + +    ++ ++   G I    
Sbjct: 63  GVTPEEQIAAVQEAHE-KDFSDFM-IKFDNYGSTHSEENREISSYIYNQLKANGHIATRG 120

Query: 124 YSGWYSLRDEAYYNDDEVYKG-------AD---------GQYYNAQH--NPVQWM----- 160
               +    E +  D  V KG       AD         G  YNA    NP   M     
Sbjct: 121 IKQLFDPEKEMFLADRYV-KGECPKCGTADQYGDNCESCGATYNAAELKNPKSVMSGATP 179

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E YFF+L  +Q+ L ++  S     L  E  N++  ++ SGL++  +SR    +G
Sbjct: 180 VEKESEHYFFKLPEFQEFLKTWTRSG---TLQDEVANKLAEWLDSGLQEWDISRDAPYFG 236

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPADL----------HVIGK 265
            +IPD P    YVW+DA   Y+ +   L D  DG +   FW A            H IGK
Sbjct: 237 FEIPDAPGKYFYVWLDAPIGYMASFKQLCDRTDGLEFDDFWKAGADQGNEATEVYHFIGK 296

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FHA++WP+ L SA    P  V++HG++   G K+SKS G  I     ++ +  + L
Sbjct: 297 DIINFHALFWPSMLHSAGFRTPNAVWAHGYVTVNGAKMSKSRGTFIKARTYLDNLQPEYL 356

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   ++     D   + D   +RVN+DL   + N+ SR    + K         G   
Sbjct: 357 RYYYAAKLNNRVDDFDLNLDDFAQRVNSDLIGKVINIASRCAGFVKK-------AGGELC 409

Query: 385 E-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           E  D  +L         I ++ +++   +A+ +++SL    + Y   ++PW L K     
Sbjct: 410 ELGDTQLLDHFIDKGNVIAQHYEDREFGKAIREIVSLADTANEYIHEKEPWALAKQEGKE 469

Query: 444 AST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                +  + + + RQ+   L   VP +A K+   L + D N      D RL+     HK
Sbjct: 470 QEVLEICSLGINLFRQIMTYLSPVVPDMAEKVCAFLNIDDLN-----WDSRLQI-LQNHK 523

Query: 502 --TFDPIFPR 509
              F P+  R
Sbjct: 524 INKFKPLMAR 533


>gi|313611383|gb|EFR86078.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 380

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 144/241 (59%), Gaps = 10/241 (4%)

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L++ +LPLPK VF HG+IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G 
Sbjct: 2   MLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGS 61

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSR 396
           DG +  +    RVN DLAN +GNL++R+V+MI K +DG IP   G  TE D++++   + 
Sbjct: 62  DGLFTPEDFVDRVNYDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNN 121

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEV 454
           V++E   +M++     AL Q+ SLVS  ++Y D   PW L K    RA  ++V+    E 
Sbjct: 122 VVKEYEASMEHMQFSVALNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAEN 181

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKPGFMLHKTFDPIFPR 509
           +R +A+LLQ F+ +   +IF  L + +EN   +  D       +  G  + K   PIFPR
Sbjct: 182 LRIIAVLLQPFLTRTPGEIFLQLGLQEEN--LKKWDSIYGYGEIPAGTTVVKKGTPIFPR 239

Query: 510 F 510
            
Sbjct: 240 L 240


>gi|62261489|gb|AAX77993.1| unknown protein [synthetic construct]
          Length = 709

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 239/521 (45%), Gaps = 49/521 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I  
Sbjct: 24  MLEMRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIML 83

Query: 61  AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A++ G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I
Sbjct: 84  KAKSLGITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLI 142

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------- 160
            K   +  Y    + +  D  V KG      A+ QY        A ++P + +       
Sbjct: 143 SKKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVIS 201

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR  
Sbjct: 202 GQSPIQKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDA 259

Query: 214 FDWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGK 265
             +G  IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGK
Sbjct: 260 PYFGFAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGK 319

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FH ++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    L
Sbjct: 320 DIIYFHTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYL 379

Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+    +    D    + +    + N+D+   + N+ SR    I K +D  + +   F 
Sbjct: 380 RYYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF- 437

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             D  + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      
Sbjct: 438 --DPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQ 495

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
           +   V    + + + L + L+  +P +   A +  +I F++
Sbjct: 496 KVHQVCSQGINMFKVLIVYLKPIIPSIVAEAERFLNIQFIS 536


>gi|221211555|ref|ZP_03584534.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168916|gb|EEE01384.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 722

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 47/510 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +++     +   D   +S+D+F  T  + +      ++  + D G I +  
Sbjct: 77  KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                + YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGIDFDAWIRAGSSAEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPWEL K   N   
Sbjct: 430 MNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 V++E  R L++ L+  +P++A  +
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEAV 519


>gi|298385978|ref|ZP_06995535.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261206|gb|EFI04073.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 679

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 242/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   +   +S+D + RTT K HH+     +K + +KG+  
Sbjct: 63  RAKKEGVTPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRQWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     LH I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLLHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +E+   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +D  +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDSKVPAC 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
              T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 AELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|229588700|ref|YP_002870819.1| methionyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511561|sp|C3KBZ7|SYM_PSEFS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229360566|emb|CAY47423.1| methionyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 683

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 225/516 (43%), Gaps = 44/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D A+ L + +D+F  T    + +    ++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHSDENRELSSQIYLRLKEAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160
                + ++    + +  D  +       G + QY        A + P            
Sbjct: 120 ATRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKNPKSAISG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + + +FF+L  +Q  L ++  S     L     N++  ++ +GL+   +SR   
Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQTWTRSG---TLQDAVANKIAEWLDAGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IP +P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCDRTPELDFDAFWAKDSTAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  +    P  +  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMLEGSGYRKPTGIAVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAENAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444
            ++ L+        I +  + +   RA+ +++ L    + +   + PW L K    +A  
Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQAEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +    V + RQL I L+  +P LA      L VA
Sbjct: 473 QAICATGVNLFRQLVIFLKPVLPLLAADAEAFLNVA 508


>gi|160884208|ref|ZP_02065211.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483]
 gi|298479939|ref|ZP_06998138.1| methionine--tRNA ligase [Bacteroides sp. D22]
 gi|156110550|gb|EDO12295.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483]
 gi|298273748|gb|EFI15310.1| methionine--tRNA ligase [Bacteroides sp. D22]
          Length = 679

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 GELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509


>gi|300690748|ref|YP_003751743.1| methionyl-tRNA synthetase (methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum PSI07]
 gi|299077808|emb|CBJ50446.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum PSI07]
          Length = 688

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 238/537 (44%), Gaps = 58/537 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L IS+D++  T    + D C  ++ K+ + G I
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFL-ISFDNYYSTDSDENRDLCERVYLKLKEAGLI 118

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 297 KDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPE 356

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRV----- 411

Query: 383 FTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              +D ++ +     L+E    I +  + +   +AL  V+ L   V+ Y D +KPW+L K
Sbjct: 412 ---NDAALANPLMVQLREAAPQIADLYEKREYSKALRAVMDLADAVNAYVDTEKPWDLAK 468

Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                D+      V +E  R LA+ L+  +P    +I   L V   N  ++++D +L
Sbjct: 469 DEAQRDKLHAACSVALEAFRLLAVYLKPILPNTVGRIEAFLNVEPLN--WRAIDAQL 523


>gi|237717171|ref|ZP_04547652.1| methionyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237721837|ref|ZP_04552318.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405941|ref|ZP_06082491.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647899|ref|ZP_06725451.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806294|ref|ZP_06765141.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443154|gb|EEO48945.1| methionyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229448706|gb|EEO54497.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356816|gb|EEZ05906.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292636807|gb|EFF55273.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446550|gb|EFG15170.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295085632|emb|CBK67155.1| methionyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 679

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 GELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509


>gi|300717549|ref|YP_003742352.1| Methionyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299063385|emb|CAX60505.1| Methionyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 668

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 210/481 (43%), Gaps = 42/481 (8%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  R+ R+ G  V F    D HG  I   AQ  G+  +  + + S+  +     
Sbjct: 3   EHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQLGIAPEQMIAEMSQEHQTDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK--- 143
            DISYD++  T    + +   +++ ++ + G I     S  Y      +  D  V     
Sbjct: 63  FDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCP 122

Query: 144 --------GADGQYYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYE 181
                   G + +   A ++P + +              + E YFF L  +   L ++  
Sbjct: 123 KCKSPDQYGDNCEVCGATYSPTELINPQSVVSGATPVMRDSEHYFFDLPEFSAMLQAWTR 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S     L  +  N++  + +SGL+   +SR    +G +IP  P    YVW+DA   Y+ +
Sbjct: 183 SGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYMGS 239

Query: 242 TGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
              L +  G      FW  D      H IGKDI+ FH+++WPA L  +N   P  +F HG
Sbjct: 240 FKNLCDKRGDIDFDAFWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHG 299

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNAD 353
           ++   G K+SKS G  I     ++ +  D+LRY+   +++   D    + +   +RVNAD
Sbjct: 300 YVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSSRIDDIDLNLEDFVQRVNAD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N + NL SR+   I K +DG +    A    D  +    +     I E   ++   RA
Sbjct: 360 IVNKVVNLASRNAGFINKRFDGKLSAELA----DPELYKTFTDASASIGEAWNSREFGRA 415

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           + ++++L    +RY D Q PW + K     A    +  + + + R L   L+  +P L  
Sbjct: 416 VREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINMFRVLMTWLKPVLPSLTE 475

Query: 472 K 472
           +
Sbjct: 476 R 476


>gi|90022043|ref|YP_527870.1| methionyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|123276670|sp|Q21I21|SYM_SACD2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89951643|gb|ABD81658.1| methionyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 677

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 227/508 (44%), Gaps = 50/508 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + ++ +++A+ Y N   H+GH  E I  D+  RF ++ G D  +    D HG  I  
Sbjct: 1   MTNKRQILVTSALPYANGAIHLGHMVETIQTDIWVRFQKMQGHDCTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTT-----KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
            A+  GVT      KV  D  + +F+D      I +D++  T  + +     ++++++  
Sbjct: 61  RAEQLGVTAEEQIAKVKADHEA-DFKDFL----IGFDNYHSTHSEENKALSHLIYERVKA 115

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWMEEEG 164
            G I +   +  +      +  D  +       GA+ QY       +A ++P++      
Sbjct: 116 NGHIAERSITQAFDPEKNLFLADRYIKGTCPKCGAEDQYGDNCENCSATYSPMELKNPRS 175

Query: 165 YFFRLSAYQDKLLSYYESHPEFI-----------LPIERRNEVISFVKSGLKDLSLSRKT 213
                +    + + Y+ + PEF            L  E  N++  ++ +GL++  +SR  
Sbjct: 176 VISGATPVAKESVHYFFTLPEFTGYLKEWTRAGHLQDEVANKLAEWLDAGLQEWDISRDA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKDI 267
             +G +IP  P    YVW+DA   Y+ +   L +  G    ++W AD      H IGKDI
Sbjct: 236 PYFGFEIPGAPGKYFYVWLDAPIGYMASFKQLCDRTGKDFDEYWKADSNCELYHFIGKDI 295

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P KV  HGF+   G+K+SKS G  I+    ++ +  + LRY
Sbjct: 296 VNFHALFWPALLSDAGFRTPTKVCVHGFLTVDGKKMSKSRGTFINARTYLDHLQPEYLRY 355

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++    D    + +   +RVN+DL   + N+ SR+   + K         GA + +
Sbjct: 356 YYAAKLTGSVDDIDLNLEDFVQRVNSDLVGKVVNIASRTAKFVQK-------AGGALSAN 408

Query: 387 --DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +E +     +    I  + +N+   +A+ ++++L    + +   Q PW L K   N  
Sbjct: 409 IINEELWQSFVKAGDVIAAHYENRDYSKAMREIMALADLANEFIAEQAPWALAKQEGNEQ 468

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +   V  + +   R +   L+  +P+ A
Sbjct: 469 KVLDVCSLGINCFRAIMTYLKPVLPQTA 496


>gi|282879053|ref|ZP_06287813.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298787|gb|EFA91196.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 687

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 244/516 (47%), Gaps = 51/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 4   KNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   +   IS+D + RTT + HH      +KK+ ++  + 
Sbjct: 64  RARKEGVTPQDVVDRYHSLIKKSFEEFGISFDIYSRTTSEIHHKLASDFFKKLYEEEKLL 123

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM--------- 160
           +     +Y      +  D  +        ++GA G   ++  +  +P++ +         
Sbjct: 124 EQETEQYYDEEAHQFLADRYITGECPHCHHEGAYGDQCEHCGSDLSPMELINPKSAVSGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  E H E+      R+ V    KS L DL L  +  
Sbjct: 184 KPVIKKTKNWYLPLNDYQTWLKKWILEGHQEW------RSNVYGQCKSWL-DLDLQPRAM 236

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L   NP+  GS  K+W       +
Sbjct: 237 TRDLDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELCESNPERWGSWEKWWKDQDTRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH + +P  L +  +  LP  V ++ F+  + +KIS +    +   E +++
Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTTRNWAVWLHEYLKD 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++
Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYFDGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D+  L     V  ++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 417 PPCGELLDVDKQALDEFKDVKNKVEGYLDAFKFREAQKEAMNLARIGNKYMTECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+P+R  TVLY++++++  LAI  + F+P  + K+
Sbjct: 477 KTDPERVKTVLYISLQLVANLAIAFEPFLPFSSEKL 512


>gi|330429369|gb|AEC20703.1| methionyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 690

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 251/562 (44%), Gaps = 75/562 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A++ G
Sbjct: 5   IFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMSGHTVHFVGADDAHGAPIMLKAESEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117
           +T +  V + +       +   I +D +  T    + +  + +++++   G         
Sbjct: 65  ITPQALVARYAAERPQYLNGFHIKFDHWHSTDSAENIELSQDIYRRLKAAGFIDTRTIEQ 124

Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P + +               
Sbjct: 125 FYDPVKGMFLPDRYIKGECPRCHAKDQYGDSCESCGAVYAPTELINPYSTLTKATPVLKS 184

Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK-----------SGLKDLSL 209
            E +FF+LS  +  + L  + +          ++EV++  +           + L D  +
Sbjct: 185 SEHFFFKLSDPRCVEFLQAWTTGSNASGNKRLQSEVLAKTREWLGTGSDDGEANLADWDI 244

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----------LDNPDGSKAKFWPA 258
           SR    +GI IPD P    YVW+DA   YL +              L  PD +  +    
Sbjct: 245 SRDEPYFGIPIPDAPGKYFYVWLDAPVGYLASLKAYCAKQGLSFDDLIAPDSNTEQ---- 300

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            +H IGKDI+ FHA++WPA L  +    P  +  HGFI   GEK+SKS G  I P+  + 
Sbjct: 301 -VHFIGKDIVYFHALFWPAMLKFSGKKTPDGLHVHGFITVSGEKMSKSRGTGISPLRYL- 358

Query: 319 EVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++G++A  +RY++  ++ A  +D  ++ D    RVN+DL     N+ SR+ + I K +DG
Sbjct: 359 DIGMNAEWMRYYIAAKLNAHVEDLDFNPDDFIARVNSDLIGKYVNIASRAANFISKHFDG 418

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +      T  ++ +L    +V +++R + +N+   RA+ QV++    +++ FDA +PW 
Sbjct: 419 QLGYQADTTALEQELL----QVTEQVRSSFENREYGRAVRQVMAQADLINQAFDAAQPWV 474

Query: 436 LKK---TNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ- 487
           L K   +  D    +L       +   + L+++L   +P L  K+   LF  D+   FQ 
Sbjct: 475 LAKGIGSASDEQKALLQDICSRALAGFKALSVMLTPVLPVLTEKVARELF--DQGALFQW 532

Query: 488 ----SLDQRLKPGFMLHKTFDP 505
                L QR+ P   L +  +P
Sbjct: 533 ADAAKLPQRIAPFKHLMQRVEP 554


>gi|163942754|ref|YP_001647638.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229558040|sp|A9VP41|SYM_BACWK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|163864951|gb|ABY46010.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 544

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 231/508 (45%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++    E   +       R+  I     ++K GL+D ++SR     G+
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWVEETGKDDQEFWDKEAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G +P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V +I   A LL+ F+P  + ++ + L
Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500


>gi|323525136|ref|YP_004227289.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323382138|gb|ADX54229.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 718

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 221/509 (43%), Gaps = 45/509 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I    
Sbjct: 76  KEGVTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEARD 135

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161
               Y    E +  D     E  K GA  QY        + + P + +            
Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGATPV 195

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  ++  +    +   E  N++  ++    ++ L D  +SR   
Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFRNLAQKRGLDFDAWVRKGSTAEQYHFIGKDIL 313

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + LRY
Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWLRY 373

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K ++G +      +  
Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----SAM 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
              +L+     +  I  N + +  +RAL   + L   V+ Y D  KPW+  K   N    
Sbjct: 430 QHPLLATLRAAIPHIAGNYEAREYNRALRHTMELADAVNAYVDTAKPWDQAKDPANAVAL 489

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473
                V++E  R L++ L+  +PKLA  +
Sbjct: 490 HETCSVSIEAFRLLSVALKPVLPKLAESV 518


>gi|83746715|ref|ZP_00943764.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Ralstonia solanacearum UW551]
 gi|83726668|gb|EAP73797.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Ralstonia solanacearum UW551]
          Length = 712

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 25  MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 83

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C  ++ K+ + G I
Sbjct: 84  RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 142

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 143 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 202

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 203 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 260

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 261 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 320

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 321 KDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 380

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 381 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 440

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
                  ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K    
Sbjct: 441 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 496

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            D+      V +E  R LA+ L+  +P    +I   L V   N  ++++D +L
Sbjct: 497 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 547


>gi|254786923|ref|YP_003074352.1| methionyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237684917|gb|ACR12181.1| methionine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 678

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 240/551 (43%), Gaps = 68/551 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I   A+  
Sbjct: 11  KILVTSALPYANGAIHLGHMVETIQTDIWVRFQKLRGNQCIYVCADDAHGTAIMLRAEQL 70

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GVT +  +   S + + D AD L I +D++  T  + + +    ++ ++ + G I     
Sbjct: 71  GVTPEEQIAAVSADHQADFADFL-IDFDNYHSTHSEENRELSSHIYTQLQNNGHIATRSV 129

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
           +  Y    + +  D  V             G + +  +A ++P++ +             
Sbjct: 130 TQAYDPEKQLFLADRYVKGTCPKCKTPDQYGDNCENCSATYSPMELLNPVSVISGATPIA 189

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + + YFF L  + D L  +  +     L  E  N++  ++ SGL++  +SR    +G +
Sbjct: 190 KDSDHYFFTLPEFSDFLKDWTRAGH---LQDEVANKLAEWLDSGLQEWDISRDAPYFGFE 246

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHA 272
           IP  P    YVW+DA   Y+ +   L D  +G +   +W  D      H IGKDI+ FHA
Sbjct: 247 IPGHPGKYFYVWLDAPIGYMASFKNLCDKTEGLEFDDYWKKDSDCELYHFIGKDIINFHA 306

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P KV  HGF+   G K+SKS G  I+    ++ +  + LRY+   +
Sbjct: 307 LFWPAMLSDAGFRTPTKVCVHGFLTVDGTKMSKSRGTFINARTYLKHLDPEYLRYYYASK 366

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPG---AFTE 385
           +    D    + +    RVN+DL   + N+ SR+   + K       ++  P     FT 
Sbjct: 367 LTNSVDDLDLNLEDFISRVNSDLVGKVVNIASRTAKFVAKSGGTLSAVVAEPALWEKFTA 426

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
           +++SI S           + +N+   +A+ ++++L    + Y   Q PW+L K      +
Sbjct: 427 AEQSIAS-----------HYENREYGKAMREIMALADAANEYIAEQAPWQLAKEAGKEQQ 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH--- 500
              V  + V     L   L+  +P  A K  + L          +LD      FM     
Sbjct: 476 VLEVCSMGVNCFAALMTFLKPVLPATALKAEEFLNT--------TLDWSDSLTFMSEHTI 527

Query: 501 KTFDPIFPRFL 511
           +TF P+  R L
Sbjct: 528 QTFKPLMTRVL 538


>gi|260577804|ref|ZP_05845738.1| methionine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258604031|gb|EEW17274.1| methionine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 574

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 231/497 (46%), Gaps = 68/497 (13%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G +VL  +GTDEHG  +   A+  G T +   D+ +R   +    L +SYD F RTT 
Sbjct: 1   MAGNEVLMVSGTDEHGTPLLVQAEKEGTTVQELADRYNRIIVEDLASLGLSYDLFTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
           + H+   + L+  + + G +      G  S        D  +            +G    
Sbjct: 61  RNHYAVVQELFTGLYNNGYMVTQTTRGAISSSTGRTLPDRYIEGTCPICGANDARGDQCD 120

Query: 149 YYNAQHNP--------------VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
               Q +P               ++++ E +   L A  + L ++ +   ++      R 
Sbjct: 121 NCGNQLDPEDLIDPRSKINGETPEFIDTEHFMLDLPALAEALTTWLKGRTDW------RP 174

Query: 195 EVISFVKSGLKDL---SLSRKTFDWGIKIP-----DDPQYIMYVWIDALTNYLTTT---- 242
            V+ F  + L+D+   ++SR   DWG+ IP     D+    +YVW DA+  YL+ +    
Sbjct: 175 NVLKFSLNLLEDIRPRAMSRD-IDWGVPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWA 233

Query: 243 GYLDNPDGSKAKFW--PADL--HVIGKDILRFHAIYWPAFLLSAN--------------- 283
             + +PD  + K+W  P  L  + +GKD + FH+  WPA LL                  
Sbjct: 234 WRIGDPDAWR-KWWNDPEALSYYFMGKDNITFHSQIWPAELLGYGGQGSKGGEAGDLADP 292

Query: 284 -LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            L LP +V S  F+   G K S S G VI   + ++E G DALRYF+        D  + 
Sbjct: 293 ALNLPTEVVSSEFLTMSGSKFSSSKGVVIYVRDFLKEFGPDALRYFIATAGPETTDTDFT 352

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            D   +R+N++LAN  GNLV+R+VSM  K++ G +PTPG  T  DE++L+  ++  + + 
Sbjct: 353 WDEFVRRINSELANEWGNLVNRTVSMAHKNF-GEVPTPGPLTAEDEALLAESAKAFEVVG 411

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAI 460
           +N+        + + + +    ++Y  A +PW+L K     +R +TVLY  ++V+  +  
Sbjct: 412 DNINLSRFKAGITEAMRIAGRANQYIAAMEPWKLAKDEDQRERLATVLYTALQVVSDVNT 471

Query: 461 LLQAFVPKLANKIFDIL 477
           LL  ++P  A KIF+ L
Sbjct: 472 LLTPYLPFSAQKIFETL 488


>gi|256822909|ref|YP_003146872.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796448|gb|ACV27104.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 674

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 234/513 (45%), Gaps = 44/513 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ +++A+ Y N   HIGH  E +  D+  RF +  G   ++    D HG  +  
Sbjct: 1   MSSQRKILVTSALPYANGDIHIGHLLEYVQTDIWVRFQKSRGHQCIYVCADDTHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ  G T + F+ ++ + + +D AD L I +D+F  T      +  + ++ K+ + G I
Sbjct: 61  RAQKEGKTPEDFIKESHQAHEQDFADCL-IGFDNFHSTHSPESKELTQGIYLKLKENGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWM-------- 160
                +  +    E +  D  V       G++ QY        A ++P +          
Sbjct: 120 SSKTINQLFDPEKEMFLPDRFVKGTCPKCGSEDQYGDNCDACGATYSPTELKNPKSAVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L  ++  L  +  +     +  E +N++  ++   L+   +SR   
Sbjct: 180 ATPILKESEHFFFDLKGFEGFLREWLGADGH--VQSEVQNKMNEWLDD-LRQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
            +G +IP +     YVW+DA   Y+ +   L +   D +  +FW  D      H IGKDI
Sbjct: 237 YFGWEIPGEKGKYFYVWLDAPIGYMASFKNLCDKRDDLNFDEFWGKDSDAEVYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH ++WP+ L  A    P  V++HGF+   G+K+SKS G  I     +     + LRY
Sbjct: 297 IYFHTLFWPSVLDGAGYRTPSAVWAHGFVTVNGQKMSKSKGTFIKARTYLNHFRPEFLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   D F  + +   +RVN+DL   + N+ SR    I K +D  +      +  
Sbjct: 357 YYAAKLSNRIDDFDLNLEDFVQRVNSDLVGKLVNIASRCAGFITKQFDSNLSD----SII 412

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           +  ++   +    E+ ++ +N+   RA+  +++L  + + Y   ++PW L K +   +RA
Sbjct: 413 EPELIKQFTEASDELAQHYENRDFGRAVKHIMALADKANAYIANEEPWNLVKNDETKERA 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V  + + + + L   L   +P+LA K+ D L
Sbjct: 473 HQVCSLGINMFKILTAYLAPVLPELAGKVQDFL 505


>gi|229007362|ref|ZP_04164960.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228753893|gb|EEM03333.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
          Length = 545

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 238/528 (45%), Gaps = 56/528 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  GV
Sbjct: 5   FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D     F      L  +YD + RT  + HH+T + ++ ++ ++G IYK      
Sbjct: 65  TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124

Query: 128 YSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE--------------E 163
           Y      +  D           E  +G      +A  +P+  +E+              E
Sbjct: 125 YCETCTQFLPDRYVEGVCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVIS----FVKSGLKDLSLSRKTFD 215
            ++F L  +Q ++        + +   +R    R+  I     +++ GL+D ++SR    
Sbjct: 185 HFYFALHKFQPQI-------KDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRD-LP 236

Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADL---HVIGKDI 267
            G+ IP    +D +  +YVWI+A+  Y + +  + +       +FW +     +V GKD 
Sbjct: 237 IGVPIPVKGYEDKK--IYVWIEAVAGYYSASKRWAEETRQDDGEFWSSSARTYYVHGKDN 294

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++R
Sbjct: 295 IPFHSIIWPAVLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL       +D  +         N++L    GN V+R++  I K YDG +P      E 
Sbjct: 355 YFLTINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHINLEL 414

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E I  +   V   I ++        A+  +   V   ++YFD Q PW+ ++  P     
Sbjct: 415 KERIEELYRSVGNAIEQDH----FKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEE 470

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRL 493
            +Y  V  I   A LL+ F+P  + ++ ++L + +   +C   L +R+
Sbjct: 471 TIYTCVYFIVNFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERI 518


>gi|254373902|ref|ZP_04989384.1| hypothetical protein FTDG_00056 [Francisella novicida GA99-3548]
 gi|151571622|gb|EDN37276.1| hypothetical protein FTDG_00056 [Francisella novicida GA99-3548]
          Length = 686

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 238/516 (46%), Gaps = 49/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 15  KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 74

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 75  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 133

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 134 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 192

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 193 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 250

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270
            IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKDI+ F
Sbjct: 251 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 310

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 311 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 370

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D+ 
Sbjct: 371 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DQE 426

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 427 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 486

Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
               + + + L   L+  +P +   A +  +I F++
Sbjct: 487 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 522


>gi|294507570|ref|YP_003571628.1| methionyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343898|emb|CBH24676.1| methionyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 712

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 234/521 (44%), Gaps = 59/521 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+L ++ A+ Y N   HIGH A   + AD+  R+ RL G DV F  G+DE G  I   A 
Sbjct: 8   ERLLVTAALPYANGPIHIGHLAGAYLPADLFVRYQRLKGEDVAFICGSDEMGVAILMRAI 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  +D      RD  +   +S+D + RT+ + H +T +  ++ + + G      
Sbjct: 68  REDRTPEDIIDTYHPQIRDNFERFGMSFDYYGRTSSETHTETTQDFFRVLDENGGFDLKT 127

Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNP--------VQ 158
               Y    E +  D                 D+  +           NP         +
Sbjct: 128 DEQLYDPEAEMFLADRFVIGTCPVCGFEEAYGDQCEQCGSSLSPTELQNPQSTLTDATPE 187

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214
           + E   ++  L   Q +L  +  SHPE+      +N V+  ++S    GLK  +++R   
Sbjct: 188 FKETTHWYLPLGELQPQLEEWIGSHPEW------KNNVVGQIQSWFDEGLKGRAITRDV- 240

Query: 215 DWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD--- 259
            WG+ +PDD            ++YVW DA   Y++ T       G     A +W  +   
Sbjct: 241 PWGVPVPDDVAERHGLEAEGKVIYVWFDAPIGYISATKEWAAEQGEPDAWADYWQDEDTR 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +H IGKD + FH + +P+ L+   +  LP  V ++ F+  +GEK+S S G  +   E +
Sbjct: 301 LVHFIGKDNIVFHCLMFPSMLMEHGDYVLPDNVPANEFLNLEGEKLSTSRGWAVWLHEYL 360

Query: 318 EEVG-----VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           ++        D LRY L   +   KD  +  +G ++RVN +LAN  GN V R+++   + 
Sbjct: 361 DDFADERHAPDLLRYALATTLPETKDADFSWEGFQQRVNGELANVFGNFVHRTLTFAQRY 420

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +DG +P     +E+D ++L   + V   +    +      A+ + ++L    ++YF+  +
Sbjct: 421 FDGTVPPLEDPSEADRAMLDRMAEVPDTVGAAYEEHRTRDAVFETMALARRGNKYFNDTE 480

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           PW   +++P   +  ++V+++V   L+IL +  +P  A  +
Sbjct: 481 PWHTHESDPQACANTIHVSLQVCAALSILFEPVLPSAAATL 521


>gi|161524036|ref|YP_001579048.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351203|ref|YP_001946831.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|226710899|sp|A9AHJ8|SYM_BURM1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|160341465|gb|ABX14551.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335225|dbj|BAG44295.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 722

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 223/510 (43%), Gaps = 47/510 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +++     +   D   +S+D+F  T  + +      ++  + D G I +  
Sbjct: 77  KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                + YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L +  G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAGSSAEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPWEL K   N   
Sbjct: 430 MNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 V++E  R L++ L+  +P++A  +
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEAV 519


>gi|18311505|ref|NP_563439.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|18146189|dbj|BAB82229.1| probable methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 514

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 229/495 (46%), Gaps = 29/495 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S++ F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     +++ GL+D  L+R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPIEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKKVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAILSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   IGN  +R ++ I K++ G I       E      ++  R    +    +N     
Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFSGEIKGE----ELPLQWKNLIRRTYASVGNKFENGEFKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEMFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVADENRCFQ 487
           I   L + D    F+
Sbjct: 466 IKMFLGIKDTKWSFK 480


>gi|228993761|ref|ZP_04153666.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765972|gb|EEM14621.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 543

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 237/528 (44%), Gaps = 56/528 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  GV
Sbjct: 5   FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D     F      L  +YD + RT  + HH+T + ++ ++ ++G IYK      
Sbjct: 65  TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHN----------PVQWMEE--------------E 163
           Y      +  D  V  G    +  A+ +          P+  +E+              E
Sbjct: 125 YCETCTQFLPDRYVEGGCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVIS----FVKSGLKDLSLSRKTFD 215
            ++F L  +Q ++        + +   +R    R+  I     +++ GL+D ++SR    
Sbjct: 185 HFYFALHKFQPQI-------KDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRD-LP 236

Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDI 267
            G+ IP    +D +  +YVWI+A+  Y + +       G    +FW +     +V GKD 
Sbjct: 237 IGVPIPVKGYEDKK--IYVWIEAVAGYYSASKRWAEEMGEDDGEFWSSSAKTYYVHGKDN 294

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++R
Sbjct: 295 IPFHSIIWPAVLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL       +D  +         N++L    GN V+R++  I K YDG +P      E 
Sbjct: 355 YFLTINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHINLEL 414

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E I      + + +   ++      A+  +   V   ++YFD Q PW+ ++  P     
Sbjct: 415 KERI----EELYRSVGNAIEQAHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEE 470

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRL 493
            +Y  V  I   A LL+ F+P  + ++ ++L + +   +C   L +R+
Sbjct: 471 TIYTCVYFIVNFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERI 518


>gi|198274029|ref|ZP_03206561.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135]
 gi|198273107|gb|EDY97376.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135]
          Length = 680

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 239/512 (46%), Gaps = 41/512 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +D      IS+D + RT+   HH      ++K+ DK +  
Sbjct: 63  RAKKEGVTPQDIVDRYHTLIKDSFKEFGISFDVYGRTSSPTHHQLASDFFRKLYDKHEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG-----ADGQY------YNAQHNPVQWM--------- 160
           +     +Y      +  D  +        A+G Y        +  +P + +         
Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 QPVMKETKHWYLPLDKHEGWLRKWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
           DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IGKD +
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPD-SWEKWWKDPETRLIHFIGKDNI 297

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDAL 325
            FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +++     D L
Sbjct: 298 VFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVL 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G   +
Sbjct: 358 RYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPACGELND 417

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   L   + V +E+ + +       A  + ++L    ++Y    +PW+L KT+  R +
Sbjct: 418 YDHETLKEFADVKEEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARVA 477

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+L ++++++  LAI  + F+P  + K+  +L
Sbjct: 478 TILNISLQLVANLAIAFEPFLPFSSEKLRKML 509


>gi|300727443|ref|ZP_07060852.1| methionine--tRNA ligase [Prevotella bryantii B14]
 gi|299775323|gb|EFI71922.1| methionine--tRNA ligase [Prevotella bryantii B14]
          Length = 691

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 258/565 (45%), Gaps = 80/565 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 4   KNYKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKKDVIFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  ++  +   IS+D + RTT + H+      +KK+ D+G + 
Sbjct: 64  RAKKEGITPQDVCDRYHKIIKESFEEFGISFDIYSRTTSETHNKLASDFFKKLYDEGKLI 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ----HNPVQWMEE-------------- 162
           +         +D   Y D+E ++    +Y   +    HNP  + ++              
Sbjct: 124 E---------KDSDQYYDEEAHQFLADRYIMGECPHCHNPKAYGDQCEKCGSDLSPMELI 174

Query: 163 ----------------EGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLK 205
                           + ++  L+ YQ+ L  +  E H E+      R  V    KS L 
Sbjct: 175 NPYSTISGSKPVIKTTKNWYLPLNEYQEWLKQWILEGHKEW------RPNVYGQCKSWL- 227

Query: 206 DLSLSRKT----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--- 256
           D+ L  +      DWGI +P +     ++YVW DA   Y++ T  L + +  K   W   
Sbjct: 228 DMDLQPRAMTRDLDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDKEPEKFGNWEQW 287

Query: 257 ---PAD--LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNV 310
              P    +H IGKD + FH + +P  L +  +  LP  V ++ F+  + +KIS S    
Sbjct: 288 WKDPETRLVHFIGKDNIVFHCVIFPTMLKAHGDYILPDNVPANEFLNLENDKISTSRNWA 347

Query: 311 IDPIEVIEEV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +   E +++     D LRY L       KD  +     ++R N++L    GN V+R++ +
Sbjct: 348 VWLDEYLKDFPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQL 407

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEV 424
             K ++G++P  G   E D++ +    +  ++++E M+  L       A  + ++L    
Sbjct: 408 TKKYWNGIVPACGELQEVDKNAI----QEFKDVKEKMEAFLDIFKFREAQKEAMNLARIG 463

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++Y    +PW++ KT+P R  T+LY++++++  LAI  + F+P  +  +  ++ +   + 
Sbjct: 464 NKYITECEPWKVWKTDPKRVETILYISLQLVANLAIAFEPFLPFSSKDLRQLINLNSFDW 523

Query: 485 CFQSLDQRLKPGFML---HKTFDPI 506
                 + LKPG  L   H  F+ I
Sbjct: 524 SELGSTELLKPGHQLAEPHLLFEKI 548


>gi|289208948|ref|YP_003461014.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288944579|gb|ADC72278.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 678

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 219/500 (43%), Gaps = 43/500 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF R  G +V++    D HG  I   A+  
Sbjct: 7   KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRARGHEVIYVCADDAHGTPIMLKARAE 66

Query: 66  GVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +  +    D ++ L + +D +  T    + +    ++  + D G I     
Sbjct: 67  GIEPEELIARVRQEHEADFSEFL-VDFDHYHSTHSDENRELAAHIYTALRDAGHIETRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPV--------------QW 159
              Y      +  D  +       GA+ QY        A ++P+              + 
Sbjct: 126 DQAYDPEAGMFLPDRFIKGTCPNCGAEEQYGDSCEACGATYSPLDLKDPVSAISGARPES 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E YFF+L  ++  L  +  S     L    RN++  +  +GL D  +SR    +G +
Sbjct: 186 RQSEHYFFKLGDFEAFLREWTGSGR---LQDAIRNKLDEWFDAGLTDWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   Y +        +W AD      H IGKDI  FH +
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMASFRAYAEKQGLDFDAWWGADSDAELYHFIGKDIAYFHTL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HGF+   G+K+SKS G  I   + ++ +  ++LRY+L  ++
Sbjct: 303 FWPAMLHGAGFRTPSAVFCHGFLTVNGQKMSKSRGTFIRARDYLDHLNPESLRYYLAAKL 362

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             G  D   + D   +RVN+DL   + N+ SR    I K   G +       +  E+ ++
Sbjct: 363 GAGVDDLDLNLDDFVQRVNSDLVGKLVNIASRCAGFITKRSHGELAAELPRPDLHEAFVA 422

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451
               + Q   +    Q I R    +++L  + ++Y D  +PW L K     A      T 
Sbjct: 423 EGEAIAQAFEKREYAQAIRR----IMALADQANQYIDEAQPWVLAKQEGREAEVQAISTQ 478

Query: 452 -VEVIRQLAILLQAFVPKLA 470
            +++ R L + L   +PKLA
Sbjct: 479 GLDLFRILIVYLAPVLPKLA 498


>gi|182624277|ref|ZP_02952062.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910495|gb|EDT72868.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 514

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 229/495 (46%), Gaps = 29/495 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  +   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPVLNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     +++ GL+D  L+R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPVEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKIVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   IGN  +R ++ I K+++G I       E      ++  R    +    +      
Sbjct: 350 ELVGEIGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNIIRRTYASVGNKFEEGEFKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +F+  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEMFNLIKQGNDFFNKNKPWILINNNKKKCEEVLYICAQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVADENRCFQ 487
           I   L + D    F+
Sbjct: 466 IKMFLGIKDTKWSFE 480


>gi|228999808|ref|ZP_04159381.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228759957|gb|EEM08930.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 543

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 238/528 (45%), Gaps = 56/528 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  GV
Sbjct: 5   FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D     F      L  +YD + RT  + HH+T + ++ ++ ++G IYK      
Sbjct: 65  TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124

Query: 128 YSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE--------------E 163
           Y      +  D           E  +G      +A  +P+  +E+              E
Sbjct: 125 YCETCTQFLPDRYVEGVCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER----RNEVIS----FVKSGLKDLSLSRKTFD 215
            ++F L  +Q ++        + +   +R    R+  I     +++ GL+D ++SR    
Sbjct: 185 HFYFALHKFQPQI-------KDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRD-LP 236

Query: 216 WGIKIP----DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD---LHVIGKDI 267
            G+ IP    +D +  +YVWI+A+  Y + +  + +       +FW +     +V GKD 
Sbjct: 237 IGVPIPVKGYEDKK--IYVWIEAVAGYYSASKRWAEETRQDDGEFWSSSARTYYVHGKDN 294

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++R
Sbjct: 295 IPFHSIIWPAVLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL       +D  +         N++L    GN V+R++  I K YDG +P      E 
Sbjct: 355 YFLTINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGHINLEL 414

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E I      + + +   ++      A+  +   V   ++YFD Q PW+ ++  P     
Sbjct: 415 KERI----EELYRSVGNAIEQAHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEE 470

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRL 493
            +Y  V  I   A LL+ F+P  + ++ ++L + +   +C   L +R+
Sbjct: 471 TIYTCVYFIVNFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERI 518


>gi|168217640|ref|ZP_02643265.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380323|gb|EDT77802.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 514

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 227/489 (46%), Gaps = 29/489 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLSYYES 182
            +Y  +     ++  + +G      N  ++ V+       FF+LS +QD    +L   ES
Sbjct: 122 EFYCPKCCDTLDEFGIKEGL----CNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNY 238
             E  + I +R     +++ GL+D  L+R+  +WGI++P    +D +  +YVWIDAL  Y
Sbjct: 178 WRENAIKITKR-----YLEGGLRDKILTRE-INWGIEVPVEGFEDKR--VYVWIDALLAY 229

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPK-KVFS 292
           +T +  +    G S  ++W  +   I    GK+ + FH   +PA L    L   + ++FS
Sbjct: 230 VTASKIVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFS 289

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             ++  +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N 
Sbjct: 290 SQYLTLEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNN 349

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L   +GN  +R ++ I K+++G I       E      ++  R    +    +      
Sbjct: 350 ELVGELGNFTNRVLTFIKKNFNGEIKGE----ELPLQWKNLIRRTYASVGNKFEEGEFKS 405

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            + ++ +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    K
Sbjct: 406 GVKEIFNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEK 465

Query: 473 IFDILFVAD 481
           I   L + D
Sbjct: 466 IKMFLGIKD 474


>gi|229062703|ref|ZP_04200011.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228716572|gb|EEL68271.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 544

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 231/508 (45%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++    E   +       R+  I     ++K GL+D ++SR     G+
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + +  + +       +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKNWAEETGKDDQEFWDKEAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G +P      E  + 
Sbjct: 357 TINAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V +I   A LL+ F+P  + ++ + L
Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500


>gi|294787920|ref|ZP_06753164.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294484213|gb|EFG31896.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 683

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 232/513 (45%), Gaps = 54/513 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K+ +++A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I  
Sbjct: 1   MTQKRKILVTSALPYANGAIHLGHMVEHIQTDIWVRFQKLRGHECHYCCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G+T +  + +             I+YD++  T    +      +++ +     I 
Sbjct: 61  AAQKQGMTPEQMIAKTHTEHLADFTGFGIAYDNYYSTHSPENKSHSERIYRALKANNKII 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHN 155
               +  +    + +  D  V KG      A  QY                   Y+A   
Sbjct: 121 SKNINQLFDPEKQMFLPDRFV-KGECPKCHAKDQYGDNCEVCGTTYAPTDLINPYSAVSG 179

Query: 156 PVQWMEE-EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSR 211
               M+E E +FF+LS   D L ++   E++    L  E  N++  ++K G L D  +SR
Sbjct: 180 ATPIMKETEHFFFKLSDCADYLKAWTSGETNGRAHLQPEALNKMNEWLKDGELADWDISR 239

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFWPADLH 261
               +G +IPD+P    YVW+DA   Y+ +   L   +G          S+A+ +    H
Sbjct: 240 DAPYFGFEIPDEPNKYFYVWLDAPVGYMASFQNLCERNGLNFDDFFGKDSQAELY----H 295

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            IGKDIL FHA++W A L  +    P  +F+HGF+   G+K+SKS G  I     + ++G
Sbjct: 296 FIGKDILYFHALFWTAMLEYSGHRAPNGIFAHGFLTVDGQKMSKSRGTFITAKSYL-DLG 354

Query: 322 VDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           ++   LRY++  ++    +D   + +    R+N+DL     N+ SR+   I K + G + 
Sbjct: 355 LNPEWLRYYIAAKLNSKIEDIDLNLNDFIARINSDLIGKYINIASRAAGFIHKKFSGSLK 414

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                  S  +++   +   + I ++ +++  ++AL +++ L   V+ Y DA KPWEL K
Sbjct: 415 DV-----SQSTLIKQLTEQSESIAQDYESREYNKALREIMGLADLVNEYVDANKPWELAK 469

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            +    S +  V  E+I    IL     P L N
Sbjct: 470 QD-GMESRLHEVCSELINAFKILTAYLFPVLPN 501


>gi|226194485|ref|ZP_03790083.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225933570|gb|EEH29559.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 717

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 129 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 188

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 189 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518


>gi|207742639|ref|YP_002259031.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206594033|emb|CAQ60960.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 688

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C  ++ K+ + G I
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 118

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 297 KDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 416

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
                  ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K    
Sbjct: 417 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            D+      V +E  R LA+ L+  +P    +I   L V   N  ++++D +L
Sbjct: 473 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523


>gi|207721382|ref|YP_002251823.1| methionyl-trna synthetase [Ralstonia solanacearum MolK2]
 gi|206586541|emb|CAQ17128.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 688

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C  ++ K+ + G I
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 118

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 297 KDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 416

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
                  ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K    
Sbjct: 417 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            D+      V +E  R LA+ L+  +P    +I   L V   N  ++++D +L
Sbjct: 473 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523


>gi|293372431|ref|ZP_06618815.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292632614|gb|EFF51208.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 679

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 241/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     ++      IS+D + RTT   HH      +K + +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHSLIKESFKEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G+ T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 GSLTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509


>gi|242314917|ref|ZP_04813933.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254190803|ref|ZP_04897310.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938478|gb|EDO94148.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|242138156|gb|EES24558.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 717

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518


>gi|299144832|ref|ZP_07037900.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515323|gb|EFI39204.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 679

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 241/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G+ T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 GSLTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509


>gi|121598252|ref|YP_993613.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385371|ref|YP_001028926.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450764|ref|YP_001081161.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167003048|ref|ZP_02268838.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|238563610|ref|ZP_00438586.2| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254177483|ref|ZP_04884138.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254199383|ref|ZP_04905749.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254205698|ref|ZP_04912050.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254357859|ref|ZP_04974132.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|121227062|gb|ABM49580.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293391|gb|ABN02660.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126243634|gb|ABO06727.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147748979|gb|EDK56053.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753141|gb|EDK60206.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148026986|gb|EDK85007.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698522|gb|EDP88492.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238520348|gb|EEP83809.1| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243061352|gb|EES43538.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 717

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518


>gi|170691989|ref|ZP_02883153.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143273|gb|EDT11437.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 715

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+  +  +   D   IS+D++  T  +        ++  + + G I    
Sbjct: 76  KEGITPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEETRVLSENIYLALKEAGLIDARD 135

Query: 124 YSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME----------- 161
               Y    E +  D     E  K GA  QY        + + P + +            
Sbjct: 136 IEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGATPI 195

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 YFFRLS    +  ++  +    +   E  N++  ++    ++ L D  +SR   
Sbjct: 196 RKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 253

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 254 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAQKRGLDFDAWVRKGSTAEQYHFIGKDIL 313

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + LRY
Sbjct: 314 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWLRY 373

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 374 YFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
              +L+     + +I  + + +   RAL Q + L   V+ Y D  KPW+  K +P  A  
Sbjct: 430 QHPLLASLRAAVPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAK-DPANAVA 488

Query: 447 V---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +     V++E  R L++ L+  +PKLA  +   L +
Sbjct: 489 LHETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLGI 524


>gi|295675816|ref|YP_003604340.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435659|gb|ADG14829.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 711

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 221/513 (43%), Gaps = 53/513 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+T K  +D    ++ R+F    D   IS+D++  T    +      ++  + + G I
Sbjct: 76  KEGLTPKQLIDRVWLEHKRDF----DSFGISFDNYYSTDSDENRVLSENVYLALKEAGLI 131

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------- 161
                   Y    E +  D     E  K GA  QY        + + P + +        
Sbjct: 132 DAREIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSG 191

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                     YFFRLS    +  S+       +   E  N++  ++    ++ L D  +S
Sbjct: 192 ATPIRKTSTHYFFRLS--DPRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDIS 249

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W          H IG
Sbjct: 250 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRQGSAAEQYHFIG 309

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  +
Sbjct: 310 KDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPE 369

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +     
Sbjct: 370 WLRYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD--- 426

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
            +     +L      L +I  + + +   RAL Q + L   V+ Y D  KPW+  K   N
Sbjct: 427 -SAMHHPLLGTLRAALPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAKDPAN 485

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                    V++E  R L++ L+  +PKLA  +
Sbjct: 486 AVALHETCSVSIEAFRLLSLALKPVLPKLAEAV 518


>gi|134281206|ref|ZP_01767915.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134247512|gb|EBA47597.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 717

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 129 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 188

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 189 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518


>gi|120598605|ref|YP_963179.1| methionyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146293316|ref|YP_001183740.1| methionyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|187647773|sp|A4Y7K8|SYM_SHEPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187647775|sp|A1RIY0|SYM_SHESW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120558698|gb|ABM24625.1| methionyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565006|gb|ABP75941.1| methionyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 689

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 235/511 (45%), Gaps = 55/511 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL----WKKISDKGD 118
             G+  +  + Q N  + +D AD  +I++D++  T    H D  R+L    + K+   G 
Sbjct: 65  QLGLAPEEMIAQVNKEHQQDFAD-FNIAFDNYHST----HSDENRVLASDIYLKLRTNGY 119

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------ 160
           I     S  +   +++ +  D   KG      +  QY        A ++P + +      
Sbjct: 120 IKSKSISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAV 178

Query: 161 --------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + E +FF L A++  L  +  S     L  E  N++  + + GL+   ++R 
Sbjct: 179 SGATPVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRD 235

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGK 265
              +G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGK
Sbjct: 236 APYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGK 295

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + L
Sbjct: 296 DIVYFHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYL 355

Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +++   D    + +   +RVN+DL   + NL SR+   I K +DG +       
Sbjct: 356 RYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI---- 411

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PD 442
            +D ++        ++I E  + +   +A+ ++++L    + +     PW++ K +   +
Sbjct: 412 -ADTTLTEAFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQE 470

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            A  V    + + R L   L+  +P+LA  +
Sbjct: 471 AAHQVCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|126440819|ref|YP_001058102.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|167909986|ref|ZP_02497077.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196314|ref|ZP_04902738.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|126220312|gb|ABN83818.1| methionine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|169653057|gb|EDS85750.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 717

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518


>gi|261879055|ref|ZP_06005482.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334337|gb|EFA45123.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 691

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 248/545 (45%), Gaps = 53/545 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVVFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  RD      IS+D + RTT K HH      +KK+ D G + 
Sbjct: 64  RAKKEGITPQEVCDRYHKMIRDSFKEFGISFDIYSRTTSKIHHKFAADFFKKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND-----------------DEVYKGA---------DGQYYNAQH 154
           +      Y      +  D                 D+  K           D     +  
Sbjct: 124 EKETEQLYDEEAHQFLADRYITGTCPHCGNPNAYGDQCEKCGSDLSPEELIDPHSTISGA 183

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV+ + +  ++  L+ YQ  L ++    H E+      R+ V    KS L DL L  + 
Sbjct: 184 KPVKKVTK-NWYLPLNDYQQWLKAWILNGHKEW------RSNVYGQCKSWL-DLDLQPRA 235

Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD---- 259
                DWGI +P +     ++YVW DA   Y++ T  L   NP+  G+  K+W       
Sbjct: 236 MTRDLDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDSNPEQWGTWQKWWQDPETRL 295

Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +H IGKD + FH + +P  L +  +  LP  V ++ F+  + +KIS S    +   E + 
Sbjct: 296 VHFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLENDKISTSKNWAVWLHEYLV 355

Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +     D LRY L       KD  +     ++  N++L    GN V+R++ +  K ++G+
Sbjct: 356 DFPEKQDVLRYVLTANAPETKDNNFMWKDFQEHNNSELVGVYGNFVNRALQLTKKYWNGV 415

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   ++D   +     + +++   +       A  + ++L    +RY    +PW++
Sbjct: 416 VPACGELNDTDRQTIQEFKDIKEKVEAYLDVFKFREAQKEAMNLARIGNRYITECEPWKV 475

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            KT+P R  T+LY++++++  LAI  + F+P  + K+  ++ + + +       + LKPG
Sbjct: 476 WKTDPKRVETILYISLQLVANLAIAFEPFLPFSSKKLRGMIGMENFDWSELGSIELLKPG 535

Query: 497 FMLHK 501
             L++
Sbjct: 536 AQLNE 540


>gi|187649793|sp|A3N6Y1|SYM_BURP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|167823191|ref|ZP_02454662.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|167814737|ref|ZP_02446417.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|217419503|ref|ZP_03451009.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396807|gb|EEC36823.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 717

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 129 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 422 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 482 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 518


>gi|171320877|ref|ZP_02909876.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093862|gb|EDT38994.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 723

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 223/516 (43%), Gaps = 45/516 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K  +++     +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  KEGVTPKQLIERVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAERA 136

Query: 124 YSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME----------- 161
               Y    E +  D     E  K       G + +   + + P + +            
Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPV 196

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTF 214
                 +FFRLS    +  S+       +   E  N++  ++    ++ L D  +SR   
Sbjct: 197 RKTSTHHFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAP 254

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKDIL
Sbjct: 255 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKDIL 314

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY
Sbjct: 315 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 374

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  
Sbjct: 375 YFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAM 430

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRA 444
           +  +++     +  I  + + +   RAL   + L  EV+ Y D  KPWEL K   N    
Sbjct: 431 NHPLVAKLRDAIASIAAHYEGREYSRALRHTMELADEVNAYVDGAKPWELAKDPANAVAL 490

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                V++E  R L++ L+  +P++A  +     VA
Sbjct: 491 HETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVA 526


>gi|319426616|gb|ADV54690.1| methionyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 689

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 235/511 (45%), Gaps = 55/511 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL----WKKISDKGD 118
             G+  +  + Q N  + +D AD  +I++D++  T    H D  R+L    + K+   G 
Sbjct: 65  QLGLAPEEMIAQVNKEHQQDFAD-FNIAFDNYHST----HSDENRVLASDIYLKLRANGY 119

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------ 160
           I     S  +   +++ +  D   KG      +  QY        A ++P + +      
Sbjct: 120 IKSKSISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAV 178

Query: 161 --------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + E +FF L A++  L  +  S     L  E  N++  + + GL+   ++R 
Sbjct: 179 SGATPVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQTEMANKLDEWFEQGLQQWDITRD 235

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGK 265
              +G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGK
Sbjct: 236 APYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGK 295

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + L
Sbjct: 296 DIVYFHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYL 355

Query: 326 RYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +++   D    + +   +RVN+DL   + NL SR+   I K +DG +       
Sbjct: 356 RYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI---- 411

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PD 442
            +D ++        ++I E  + +   +A+ ++++L    + +     PW++ K +   +
Sbjct: 412 -ADTTLTEAFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQE 470

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            A  V    + + R L   L+  +P+LA  +
Sbjct: 471 AAHQVCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|167718572|ref|ZP_02401808.1| methionyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167893288|ref|ZP_02480690.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|237811322|ref|YP_002895773.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237504542|gb|ACQ96860.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|53718640|ref|YP_107626.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126454059|ref|YP_001065337.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167844753|ref|ZP_02470261.1| methionyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167918019|ref|ZP_02505110.1| methionyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|254298272|ref|ZP_04965724.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|68565972|sp|Q63W90|SYM_BURPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187647709|sp|A3NSL6|SYM_BURP0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52209054|emb|CAH34994.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126227701|gb|ABN91241.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157808199|gb|EDO85369.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|229014224|ref|ZP_04171345.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228747178|gb|EEL97060.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 544

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 231/508 (45%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQDG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++    E   +       R+  I     ++K GL+D ++SR     G+
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + +  + +       +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKNWAEETGKDDQEFWDKEAETYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G +P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V +I   A LL+ F+P  + ++ + L
Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500


>gi|167901747|ref|ZP_02488952.1| methionyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|254181405|ref|ZP_04888002.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184211943|gb|EDU08986.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|53725214|ref|YP_102479.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|68565971|sp|Q62LE0|SYM_BURMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649794|sp|A3MLM5|SYM_BURM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649795|sp|A2SAF7|SYM_BURM9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649796|sp|A1V5W0|SYM_BURMS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52428637|gb|AAU49230.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|167737601|ref|ZP_02410375.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 725

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 225/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNA------QHNPVQWME---------- 161
               Y    + +   D   KG      A  QY ++       + P   +           
Sbjct: 137 IEQAYDPVRQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHYFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|153806949|ref|ZP_01959617.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185]
 gi|149130069|gb|EDM21279.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185]
          Length = 679

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEGWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGCVPAQ 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 GELTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509


>gi|260641818|ref|ZP_05413598.2| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624529|gb|EEX47400.1| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 711

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 35  KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 94

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+   HH      +K + DKG+  
Sbjct: 95  RAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTSSPTHHQLASDFFKTLYDKGEFI 154

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 155 EKTSEQYYDKEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 214

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 215 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 268

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 269 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 324

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 325 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 384

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 385 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGKVPAQ 444

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G  T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 445 GELTDYDKETLKEFADVKAEVEKLLDIFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 504

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 505 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 541


>gi|76810283|ref|YP_332622.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254260859|ref|ZP_04951913.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|123599931|sp|Q3JUY1|SYM_BURP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76579736|gb|ABA49211.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254219548|gb|EET08932.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 725

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    + +                  Y D     G   Q  +  H         PV
Sbjct: 137 IEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 197 RKTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N   
Sbjct: 430 MNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++A  +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIA 526


>gi|238757204|ref|ZP_04618391.1| Methionyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704582|gb|EEP97112.1| Methionyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 650

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 214/482 (44%), Gaps = 44/482 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  RF R+ G  V F    D HG  I   AQ  G+  +  + + S+  +     
Sbjct: 3   EHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQMGIEPEQMIAEMSQEHQQDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144
             ISYD++  T    + +   +++ ++   G I     S  Y   ++  +  D   KG  
Sbjct: 63  FAISYDNYHSTHSDENRELSSLIYSRLKANGHIKNRTISQLYD-PEKGMFLPDRFVKGTC 121

Query: 145 ----ADGQY------YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYY 180
               A  QY        A ++P + +              E E +FF L A+ D L ++ 
Sbjct: 122 PKCKAPDQYGDNCEVCGATYSPTELINPQSAVSGATPVMRESEHFFFDLPAFSDMLQAWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            S     L  +  N++  + +SGL+   ++R    +G ++PD P    YVW+DA   Y+ 
Sbjct: 182 RSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMG 238

Query: 241 TTGYLDNPDGSKA--KFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   L +  G     +FW  D      H IGKDI+ FH+++WPA L  +N   P  VF H
Sbjct: 239 SFKNLCDKRGDIDFDEFWREDSKTDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNVFVH 298

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352
           G++   G K+SKS G  I     ++ +  D LRY+   +++   D    + +   +RVNA
Sbjct: 299 GYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNA 358

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           D+ N + NL SR+   I K + G +    A   +D  +    +     I +   ++   +
Sbjct: 359 DIVNKVVNLASRNAGFINKRFGGKL----ADQLADPVLYKTFTDAAVSIADAYTSRESSK 414

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ ++++L    +RY D Q PW + K     A    +  + + + R L   L+  +P L 
Sbjct: 415 AIREIMALADVANRYVDEQAPWVVAKEEGRDADLQAICSMGINLFRVLMTYLKPVLPSLT 474

Query: 471 NK 472
            +
Sbjct: 475 ER 476


>gi|134301790|ref|YP_001121758.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|187647721|sp|A4IXI6|SYM_FRATW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134049567|gb|ABO46638.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 674

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270
            IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKDI+ F
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 299 HTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  
Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
               + + + L + L+  +P +   A +  +I F++
Sbjct: 475 CSQGINMFKVLIVYLKPIIPSIVAEAERFLNIQFIS 510


>gi|217973063|ref|YP_002357814.1| methionyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782872|sp|B8E958|SYM_SHEB2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|217498198|gb|ACK46391.1| methionyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 689

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  ++++D++  T  + +      ++ K+ D G I   
Sbjct: 65  QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +       + ++
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKL------AKIND 413

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           + L+      Q++  +  +++   +A+ ++++L    + +     PW++ K +   + A 
Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V    + + R L   L+  +P+LA  +
Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|56708349|ref|YP_170245.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670819|ref|YP_667376.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457475|ref|ZP_03665948.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370971|ref|ZP_04986974.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875172|ref|ZP_05247882.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|68565962|sp|Q5NFE7|SYM_FRATT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122970891|sp|Q14GV0|SYM_FRAT1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56604841|emb|CAG45923.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321152|emb|CAL09306.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569212|gb|EDN34866.1| hypothetical protein FTBG_01592 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841171|gb|EET19607.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159964|gb|ADA79355.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 674

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270
            IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKDI+ F
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 299 HTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  
Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
               + + + L + L+  +P +   A +  +I F++
Sbjct: 475 CSQGINMFKVLIVYLKPIIPSIVAEAERFLNIQFIS 510


>gi|325107887|ref|YP_004268955.1| methionyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968155|gb|ADY58933.1| methionyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 680

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 227/513 (44%), Gaps = 56/513 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   HIGH  E +  D+  RF +L G   LF    D HG  I   A+  
Sbjct: 4   KILVTAALPYANGHIHIGHLVEYLQTDIWVRFQKLRGHRCLFFCADDTHGTAIMMRARKE 63

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G +    +++ SR+  +D AD   I +D++  T  + +      +WK + + G +     
Sbjct: 64  GRSETELIEEMSRSHQQDFAD-FGIEFDNYGSTDSEENKILGERIWKSLREAGLVETRDV 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           +  Y  ++  +  D  V       GAD QY +         E  G  +  S  ++ +  Y
Sbjct: 123 TQLYDPQEGTFLADRYVKGNCPKCGADDQYGDN-------CEVCGATYSPSELKNPVSVY 175

Query: 180 YESHPEF------ILPIER---------------RNEVISFVKS-----GLKDLSLSRKT 213
             + PE        + IE+               ++EV +++K       L+D  +SR  
Sbjct: 176 SGTTPEVRTAPHAFVNIEQLHDFLDDWTQSGKHLQSEVANYLKGHFLGEPLRDWDVSRPA 235

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
             +G +IPD P +  YVW DA   Y+ +T      +    + W AD      H IGKDI 
Sbjct: 236 PYFGFEIPDMPGHYWYVWFDAPIGYIASTWQWCKRNNETLESWWADDSTEIHHFIGKDIT 295

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L +A L LP KV  HGF+   GEK+SKS G  I     +  +    LRY+
Sbjct: 296 YFHTLFWPAMLKTAGLNLPTKVHIHGFLKVNGEKMSKSRGTFIQARTYLNNLDPAWLRYY 355

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    D    +      +VNADL   + N+ SR    I         T       D
Sbjct: 356 FATKLNSRLDDLDLNVQEFVDKVNADLVGKVVNIASRCAKFIGGQ------TLCETYPDD 409

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
             + +  +   ++I  + +N     A+ +++ L    ++Y +  +PW+L+K +P++A   
Sbjct: 410 GGLFAKAAAAGEQIAAHYENCDYSPAMREIMQLAEAANKYVEDNQPWKLRK-DPEKAEEL 468

Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V  V + + RQ+ I L   +P+LA +  ++L
Sbjct: 469 REVCTVALNLFRQVVIYLSPVLPRLAEQAGELL 501


>gi|254372434|ref|ZP_04987924.1| hypothetical protein FTCG_01659 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570162|gb|EDN35816.1| hypothetical protein FTCG_01659 [Francisella novicida GA99-3549]
          Length = 673

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 235/515 (45%), Gaps = 48/515 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFQQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            IP  + Q   YVW+DA   Y+ +   Y +  +     FW  +      H IGKDI+ FH
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   
Sbjct: 299 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 358

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    D    + +    + N+D+   + N+ SR  + I K +D  + +   F   D  +
Sbjct: 359 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAAFIYKKFDATL-SGEIF---DPEL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
            S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V 
Sbjct: 415 ESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
              + + + L   L+  +P +   A +  +I F++
Sbjct: 475 SQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 509


>gi|160875690|ref|YP_001555006.1| methionyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083263|sp|A9L4F6|SYM_SHEB9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|160861212|gb|ABX49746.1| methionyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267879|gb|ADT94732.1| methionyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 689

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  ++++D++  T  + +      ++ K+ D G I   
Sbjct: 65  QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +       + ++
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKL------AKIND 413

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           + L+      Q++  +  +++   +A+ ++++L    + +     PW++ K +   + A 
Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V    + + R L   L+  +P+LA  +
Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|126174678|ref|YP_001050827.1| methionyl-tRNA synthetase [Shewanella baltica OS155]
 gi|187647770|sp|A3D5E5|SYM_SHEB5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|125997883|gb|ABN61958.1| methionyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 689

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  ++++D++  T  + +      ++ K+ D G I   
Sbjct: 65  QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +       + ++
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKL------AKIND 413

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           + L+      Q++  +  +++   +A+ ++++L    + +     PW++ K +   + A 
Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V    + + R L   L+  +P+LA  +
Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|300711986|ref|YP_003737800.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125669|gb|ADJ16008.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 692

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 225/506 (44%), Gaps = 53/506 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D LAR  R  G    F +G+D HG  +A  A+  G+T
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVSGDTLARSLRRLGQQTAFVSGSDMHGTPVAVNAEREGIT 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY-KGCYSGW 127
            + F  +    + +      + +D++  T ++ + +  R   ++  D G +Y K     W
Sbjct: 74  PEEFALEYHEEYAETFPEFGVEFDNYGHTHDETNTELTREFVREWIDNGHVYEKEIQVAW 133

Query: 128 YSLRDEAYYN---------------DDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
               D+   +                DE  +G        +          NP ++   E
Sbjct: 134 DPEVDQPLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEIEDPTSTLTGNPAEYRTRE 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             F RLS +Q+ L         F+  +E     +N+   +V+  L+DL ++R   DWGI+
Sbjct: 194 HEFLRLSDFQEYLKG-------FLGRLEGTDNAKNQPKEWVEGELQDLCITRD-MDWGIE 245

Query: 220 IPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILR 269
            P++ +   ++YVW+DA   Y+ +T       G +   W           +HVIG+DI++
Sbjct: 246 YPEEGKEDLVLYVWVDAPIEYVASTKQYTERVGEEVFDWAEPWKEGDGELIHVIGRDIIQ 305

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
            H ++WP+ L  A+   P+ V + GF+   G+  S S    I   + + E    D LRY+
Sbjct: 306 HHTVFWPSMLRGADYNEPRAVMASGFVNLDGKAFSTSRNRAIWADDYLAEGFDPDLLRYY 365

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           LV      +D  +  +  ++RVN +L    GN V RS+    ++++G   TP A  +  E
Sbjct: 366 LVTTGGFQQDVDFSWERFQERVNGELVGNFGNFVYRSLLFAHRNFEG---TPSA--DVSE 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            + +  +  ++  R ++    +  A    I L    + Y    +PW+L   +P+ A+ V+
Sbjct: 421 EVRTEINAAMEAFRRDLNEYSLREASQAGIRLSRFGNEYIQRNEPWKLVDEDPEEAARVI 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
              V++ +  A+LL+  +P  A +++
Sbjct: 481 RDCVQLAKAAAVLLEPILPHAAERLW 506


>gi|299066020|emb|CBJ37201.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum CMR15]
          Length = 688

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 238/537 (44%), Gaps = 58/537 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C  ++ K+ +K  I
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEKDLI 118

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLRDWVGDLAQPEATNKMREWLGDEGESTLSDWDIS 236

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 237 RDAPYFGFEIPGTPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSPHSTTEQYHFIG 296

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 297 KDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRV----- 411

Query: 383 FTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              +D ++ +     L+E    I +  + +   +AL  V+ L   V+ Y D +KPW+L K
Sbjct: 412 ---NDAALANPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAK 468

Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                DR      V +E  R LA+ L+  +P    +I   L V   N  ++++D +L
Sbjct: 469 DEAQRDRLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523


>gi|169656526|ref|YP_001427901.2| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254368695|ref|ZP_04984709.1| hypothetical protein FTAG_01719 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|187649783|sp|A7NAE2|SYM_FRATF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157121610|gb|EDO65787.1| hypothetical protein FTAG_01719 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551594|gb|ABU60945.2| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 674

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270
            IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKDI+ F
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 299 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  
Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
               + + + L   L+  +P +   A +  +I F++
Sbjct: 475 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 510


>gi|226944041|ref|YP_002799114.1| methionyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511555|sp|C1DEF4|SYM_AZOVD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226718968|gb|ACO78139.1| methionyl-tRNA synthetase, class Ia [Azotobacter vinelandii DJ]
          Length = 681

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 221/516 (42%), Gaps = 44/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MPEARQILVTSALPYANGSIHLGHMLEYIQTDIWVRFQKQRGNQCVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +    + +  D AD L + +D++  T  + +      ++ ++ D G I
Sbjct: 61  RAEKEGITPEQLIAYVQAEHSADFADFL-VDFDNYHSTHAEENRALSEAIYLRLRDAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWMEEEG---- 164
                + ++      +  D  +       GA+ QY        A + P +  +       
Sbjct: 120 ATRSVTQYFDPEKGMFLADRFIKGTCPKCGAEDQYGDNCEKCGATYEPTELKDPRSAISG 179

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +FF+L  ++  L  +  S     L     N++  ++  GL++  +SR   
Sbjct: 180 ATPVLKDSKHFFFKLPDFEAMLKEWTRSG---TLQEAVANKIAEWLDGGLQEWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD+P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWCKDSKAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++ G D    + +   ++VN+DL   + N+ SR    I K   G++       E 
Sbjct: 357 YYASKLSRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGLMVDANPEPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E+           I E  + +   RA+ ++++L    + +   + PW L K    +   
Sbjct: 417 WEAFQVAAP----AIAEAYEGRDFGRAMREIMALADRANAWIADKAPWALNKQEGKQTEV 472

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +    + + RQL I L+  +P LA      L VA
Sbjct: 473 QEICAFGINLFRQLVIFLKPVLPNLATAAEAFLNVA 508


>gi|94676991|ref|YP_588839.1| methionyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988114|sp|Q1LT75|SYM_BAUCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|94220141|gb|ABF14300.1| methionyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 547

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 218/502 (43%), Gaps = 44/502 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   A+ 
Sbjct: 6   SKILVTCALPYANGSLHLGHMLEHIQADIWVRYQRIRGKQVYFICADDAHGTPIMLKAKQ 65

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +G+T +  +++ N  +  D+A   +ISYD++  T    + +    ++  + + G I K  
Sbjct: 66  SGITPEAMINKINQEHQTDLAQ-FEISYDNYYSTHSDENRELVISIYNTLKENGLIKKRM 124

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG-------- 164
            S  Y      +  D  V             G + +   A ++P   ++ +         
Sbjct: 125 ISQLYDPIHNIFLPDRFVKGYCPRCKLPDQYGDNCEICGATYHPTDLIDPKSTLSGVTPV 184

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  FF L  + + L ++  S     L  +  N++  +   GL+   +SR    +G 
Sbjct: 185 ISKSKHLFFDLPVFSEVLRAWTRSGA---LQEQVANKMQEWFDMGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFW----PADL-HVIGKDILRFH 271
           ++PD P    YVW+DA   Y+     L N   D    +FW     ADL H IGKDI  FH
Sbjct: 242 EVPDTPGKYFYVWLDAPIGYIGAFKNLCNKRNDIIFDEFWHLSSKADLYHFIGKDITYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            I+WPA L  + L  P  +F HG++   G K+SKS G +I     +  +    LRY+   
Sbjct: 302 GIFWPAILEGSKLRKPTNLFVHGYVTINGAKMSKSRGTLIKASTYLAHLDASYLRYYYAT 361

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +    RVNAD+ N + NL +R+ S I K +D  +      T  D+ +
Sbjct: 362 KLSSDINDIDLNFNDFVNRVNADIINKVINLAARNASFIQKYFDNKLSA----TIEDQYL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
                     I E   N+   RA+ +++ L    + Y   ++PW + K          + 
Sbjct: 418 YDYFVTASVSIGEAFNNRETSRAIREIMILADRANVYIHKKEPWVVAKNKYYQQDLHNIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLA 470
            + + + R L   LQ  +P LA
Sbjct: 478 SMGINLFRLLMTYLQPVLPNLA 499


>gi|15921721|ref|NP_377390.1| methionyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|25009384|sp|Q971C1|SYM_SULTO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15622508|dbj|BAB66499.1| 571aa long hypothetical methionyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 571

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 248/522 (47%), Gaps = 49/522 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+++++A  Y NA PH+G+    ++ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KIFVASAWPYVNAVPHLGNLIGSVLSADVFARYARLKYGQENVVFVSGSDEHGTPIEVEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCR----ILWKKISDKG 117
           +   V  K   DQ     + +  DV +ISY+++ RT  + H    R     L K I  + 
Sbjct: 62  KKRNVNPKELTDQAHEYDKKLFLDVWEISYNNYTRTESEIHKTFVRDFMLKLEKYIKIEE 121

Query: 118 DIYKGC-----------------YSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPV 157
           D    C                 Y G+   R +   N   +       + +       PV
Sbjct: 122 DEIPYCEYDKIYLPDRFVKGTCPYCGFEDARGDQCDNCGRLLTPRLLVNPKCVLCGRTPV 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LSA+ DK+  + ++     LP   ++  +S+VK GLK  S++R    WG
Sbjct: 182 -FKKTKHWFFDLSAFNDKIEEWIKNSQ--TLPENVKSVALSWVKEGLKPRSITRDN-AWG 237

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD----LHVIGKDIL 268
           I  P +      +YVW +AL  Y++ T       G +    KFW  +     + IGKD +
Sbjct: 238 IPAPFEGAEGKTIYVWFEALLGYISATIEYFKKIGKEEEWKKFWFGNDVKSYYFIGKDNI 297

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDA 324
            FHA+  PA L+++  N  LP  + +  ++L++G+K SKS  +G  ID  E  + + ++ 
Sbjct: 298 PFHAVILPAMLMASGENYVLPTVIAATEYLLYEGQKFSKSRKIGVWID--EAPQLLDIEY 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--A 382
            R+ L+R     +D  +      + VN +L + IGN  +R +SM+ + ++G +P      
Sbjct: 356 WRFILIRLRPEERDTNFTWREALRIVNTELNDDIGNYANRVLSMVRRYFNGEVPQIKYEK 415

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             + D   +S      +++ E  +   +     +++ L    + Y + + PW L K + +
Sbjct: 416 LKDEDTKFISEIKEAPKKMSELFELGKLKAGSEEILKLARNGNSYLNIRAPWNLIKNDKE 475

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            A  VL + V  +R L+I+L   +PK A K++++L   D  R
Sbjct: 476 EAGNVLNIAVNSLRTLSIMLYPLMPKSAEKLYNMLGFKDIER 517


>gi|255011397|ref|ZP_05283523.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149211|ref|ZP_07811404.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137978|gb|EFR55338.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 679

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 236/504 (46%), Gaps = 45/504 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +VLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKENVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+ K HH+     +K + +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKTLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y      +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 183 KPVM-KETKHWYLPLDKHETWLRQWILEDHKEWRPNV--YGQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLVHFIGKD 295

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E +E+     D
Sbjct: 296 NIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G  
Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGEL 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           T+ D+  L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R
Sbjct: 416 TDYDKETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVP 467
             T+L ++++++  LAI  + F+P
Sbjct: 476 VGTILNISLQLVANLAIAFEPFLP 499


>gi|167580180|ref|ZP_02373054.1| methionyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 709

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 235/546 (43%), Gaps = 61/546 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    + +   D   KG      A  QY ++              NP   +     
Sbjct: 137 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  +FFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W +        H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
           ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N   
Sbjct: 430 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQSL 489
                 V++E  R L++ L+  +P++A  +   L +     AD N         R +Q L
Sbjct: 490 LHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHL 549

Query: 490 DQRLKP 495
             R+ P
Sbjct: 550 MTRVDP 555


>gi|255016634|ref|ZP_05288760.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 185

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 119/182 (65%), Gaps = 6/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   ++K++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFKQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LL 177
           L+
Sbjct: 183 LV 184


>gi|229169755|ref|ZP_04297455.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228613794|gb|EEK70919.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 544

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 230/508 (45%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQDG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VMVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE-------------- 162
            Y      +  D           E  +G      +A  +P+  +E+              
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGI 218
           E ++F L  +Q ++    E   +       R+  I     ++K GL+D ++SR     G+
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQ---KGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGV 238

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW  +    +V GKD + F
Sbjct: 239 PIPVAGYEDKK--IYVWIEAVTGYYSASKHWAEETGKDDQEFWDKEAKTYYVHGKDNIPF 296

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 297 HSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D  +         N++L    GN V+R++  I K Y G +P      E  + 
Sbjct: 357 TVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGSIDVELKDK 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y
Sbjct: 417 V----EGLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIY 472

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V +I   A LL+ F+P  + ++ + L
Sbjct: 473 NCVYLIANFAQLLEPFLPFSSERVRNTL 500


>gi|83814986|ref|YP_445678.1| methionyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|123753405|sp|Q2S2A3|SYM_SALRD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83756380|gb|ABC44493.1| methionyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 713

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 232/521 (44%), Gaps = 59/521 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+L ++ A+ Y N   HIGH A   + AD+  R+ RL G DV F  G+DE G  I   A 
Sbjct: 8   ERLLVTAALPYANGPIHIGHLAGAYLPADLFVRYQRLKGEDVAFICGSDEMGVAILMRAI 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  +D      RD  +   +S+D + RT+ + H +T +  ++ + + G      
Sbjct: 68  REDRTPEDIIDTYHPQIRDNFERFGMSFDYYGRTSSETHTETTQDFFRVLDENGGFDLKT 127

Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNP--------VQ 158
               Y    E +  D                 D+  +           NP         +
Sbjct: 128 DEQLYDPEAEMFLADRFVIGTCPVCGFEEAYGDQCEQCGSSLSPTELENPQSTLTDATPE 187

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214
           + E   ++  L   Q +L  +  SHPE+      +N V+  ++S    GLK  +++R   
Sbjct: 188 FKETTHWYLPLGELQPQLEEWIGSHPEW------KNNVVGQIQSWFDEGLKGRAITRDVL 241

Query: 215 DWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD--- 259
            WG+ +PDD            ++YVW DA   Y++ T       G       +W  +   
Sbjct: 242 -WGVPVPDDVAERHGLEAEGKVIYVWFDAPIGYISATKEWAAEQGEPDAWTDYWQDEDTR 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +H IGKD + FH + +P+ L+   +  LP  V ++ F+  +GEK+S S G  +   E +
Sbjct: 301 LVHFIGKDNIVFHCLMFPSMLMEHGDYVLPDNVPANEFLNLEGEKLSTSRGWAVWLHEYL 360

Query: 318 EEVG-----VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           ++        D LRY L   +   KD  +  +G ++RVN +LAN  GN V R+++   + 
Sbjct: 361 DDFADERHAPDLLRYALATTLPETKDADFSWEGFQQRVNGELANVFGNFVHRTLTFAQRY 420

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +DG +P     +E+D  +L   + V   +    +      A+ + ++L    ++YF+  +
Sbjct: 421 FDGTVPPLEDPSEADRVMLDRMAEVPDTVGAAYEEHRTRDAVFETMALARRGNKYFNDTE 480

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           PW   +++P   +  ++V+++V   L+IL +  +P  A  +
Sbjct: 481 PWHTHESDPQACANTIHVSLQVCAALSILFEPVLPSAAATL 521


>gi|283777954|ref|YP_003368709.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436407|gb|ADB14849.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 696

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 213/515 (41%), Gaps = 72/515 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++ ++ A+ Y N   HIGH  E I  D+  RF +L G   +F    D HG  I   A+ 
Sbjct: 3   KRILVTAALPYANGPIHIGHLVEYIQTDIWVRFQKLRGERCIFLCADDTHGTAIMIRAKA 62

Query: 65  AGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK-- 121
            G T +  + + ++ + RD A    I +D++  T    +   C  +W  + +KG I +  
Sbjct: 63  EGRTEEALIAEMSAAHQRDFAG-FQIEFDNYGSTNSPENRLLCHQIWGSLREKGLIVEKD 121

Query: 122 ---------------------------------GCYSGWYSLRDEAYYNDDEVYKGADGQ 148
                                             C     +       N      GA  +
Sbjct: 122 VSQLFDPVAGTFLADRFVKGNCPKCGSPDQYGDNCDKCGSTYTPAELVNPKSTLSGATPE 181

Query: 149 YYNAQHNPVQWMEEEGYFFRLSA----YQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
             +A H  VQ  +  G+    +      QD++ +Y + H               F+   L
Sbjct: 182 VRSAPHLFVQLEKLHGFLNEWTQNGKHLQDEVANYLKGH---------------FLGEEL 226

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---- 260
           +D  +SR    +G +IPD P    YVW DA   Y+ +T      +G +   W  +     
Sbjct: 227 RDWDVSRPAPYFGFEIPDSPGNYWYVWFDAPIGYIASTLEWCKRNGEELDTWWKNPETEI 286

Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            H IGKDI  FH ++WP  L SA L LP KV  HGF+   GEK+SKS G  +     ++ 
Sbjct: 287 HHFIGKDITYFHTLFWPGMLKSAELNLPTKVHIHGFLTVDGEKMSKSKGTFVKAETFLKH 346

Query: 320 VGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +   ALRYF   ++    D    + D    ++N+DL   + NL SR+   +     G+  
Sbjct: 347 LDPAALRYFYASKLGPRLDDLDLNVDEFTAKINSDLVGKVVNLASRTSKFV--QTSGL-- 402

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              A    D  +    +   +EI +  Q+    RA+  ++ L    + + + + PW+L K
Sbjct: 403 --SAVYPDDGGLFDRAALAGKEIADAYQHCDYARAMRLIMELADRANPFIEERAPWKLAK 460

Query: 439 TNPDRAST---VLYVTVEVIRQLAILLQAFVPKLA 470
            +P  A     +  V + + RQ+A+ L   +PKLA
Sbjct: 461 -DPAAAQQLQDICSVGLNLFRQIAVYLAPVLPKLA 494


>gi|115314340|ref|YP_763063.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122325627|sp|Q0BNA8|SYM_FRATO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115129239|gb|ABI82426.1| methionine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 674

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 237/516 (45%), Gaps = 49/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFICGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270
            IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKDI+ F
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 299 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  
Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
               + + + L   L+  +P +   A +  +I F++
Sbjct: 475 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 510


>gi|304409055|ref|ZP_07390676.1| methionyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303058|ref|ZP_07582813.1| methionyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304352876|gb|EFM17273.1| methionyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913418|gb|EFN43840.1| methionyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 689

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 237/507 (46%), Gaps = 47/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  ++++D++  T  + +      ++ K+ D G I   
Sbjct: 65  QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K +DG +    A T   E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKI-ADTTLTE 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           + L+    V+ +  E+ +     +A+ ++++L    + +     PW++ K +   + A  
Sbjct: 419 AFLAK-QDVIADFYESRE---YGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
           V    + + R L   L+  +P+LA  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|260173039|ref|ZP_05759451.1| methionyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315921317|ref|ZP_07917557.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695192|gb|EFS32027.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 679

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +       IS+D + RTT   HH      +K + +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHSLIKKSFAEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN---------------------AQH 154
           +     +Y    + +  D  +     +  ++G Y +                     +  
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRN---EVISFVKSGLKDLSLS 210
            PV   E + ++  L  ++  L  +  E H E+     R N   +  S++  GL+  ++S
Sbjct: 183 KPVM-KETKHWYLPLDKHEAWLRKWILEDHKEW-----RPNVYGQCKSWLDMGLQPRAVS 236

Query: 211 RKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           R   DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H I
Sbjct: 237 RD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETRLIHFI 292

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-- 320
           GKD + FH I +PA L +  +  LP  V S+ F+  +G+KIS S    +   E + +   
Sbjct: 293 GKDNIVFHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPG 352

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     + R N +L    GN V+R++ +  K +DG +P  
Sbjct: 353 KQDVLRYVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQ 412

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G+ T+ D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+
Sbjct: 413 GSLTDYDKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTD 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R  T+L ++++++  LAI    F+P  + K+  +L
Sbjct: 473 MERVGTILNISLQLVANLAIAFDPFLPFSSEKLRKML 509


>gi|78067237|ref|YP_370006.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728935|sp|Q39DV4|SYM_BURS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77967982|gb|ABB09362.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 720

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 225/514 (43%), Gaps = 45/514 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 19  QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T    +      ++  + D G I +    
Sbjct: 79  GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALQDAGFIAEREIE 138

Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161
             Y    E +  D     E  K       G + +   + + P + +              
Sbjct: 139 QAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPVRK 198

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFDW 216
             + YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR    +
Sbjct: 199 TSKHYFFRLS--DPRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPYF 256

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL----HVIGKDILRF 270
           G +IP  P    YVW+DA   Y  +   L + +G     W  P       H IGKDIL F
Sbjct: 257 GFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGVDFDAWVRPGSTTEQYHFIGKDILYF 316

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           H ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+ 
Sbjct: 317 HTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYF 376

Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  + 
Sbjct: 377 AAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMNH 432

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
            +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N      
Sbjct: 433 PLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALHE 492

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              V++E  R L++ L+  +P++A  +     +A
Sbjct: 493 TCSVSLESFRLLSLALKPVMPRVAEAVESFFGIA 526


>gi|209522384|ref|ZP_03270997.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209497181|gb|EDZ97423.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 711

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 228/522 (43%), Gaps = 59/522 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+T K  +D    ++ R+F    D   IS+D++  T    +      ++  + + G I
Sbjct: 76  QEGLTPKQLIDRVWLEHKRDF----DNFGISFDNYYSTDSDENRVLSENVYLALKEAGLI 131

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME- 161
                   Y    E +  D     E  K GA  QY ++              NP   +  
Sbjct: 132 DAREIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELVNPYSVVSG 191

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                     YFFRLS    +  ++  +    +   E  N++  ++    ++ L D  +S
Sbjct: 192 ATPIRKTSTHYFFRLS--DPRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDIS 249

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W          H IG
Sbjct: 250 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSTAEQYHFIG 309

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  +
Sbjct: 310 KDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPE 369

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +     
Sbjct: 370 WLRYYFAAKLNSTMEDLDLNLDDFQARVNSDLIGKYVNIASRAAGFLIKRFDGRVQD--- 426

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +     +L      L +I  + + +   RAL Q + L   V+ Y D  KPW+  K   D
Sbjct: 427 -SAMHHPLLGTLRSALPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAK---D 482

Query: 443 RASTV-----LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            A++V       V+VE  R L++ L+  +PKLA  +   L +
Sbjct: 483 PANSVALHETCSVSVEAFRLLSLALKPVLPKLAEAVEAFLAI 524


>gi|167618283|ref|ZP_02386914.1| methionyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 710

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 235/546 (43%), Gaps = 61/546 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   A+
Sbjct: 9   RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 69  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 128

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    + +   D   KG      A  QY ++              NP   +     
Sbjct: 129 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 187

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  +FFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 188 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 245

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W +        H IGKDI
Sbjct: 246 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 305

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 306 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 365

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 366 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
           ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N   
Sbjct: 422 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVA 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQSL 489
                 V++E  R L++ L+  +P++A  +   L +     AD N         R +Q L
Sbjct: 482 LHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHL 541

Query: 490 DQRLKP 495
             R+ P
Sbjct: 542 MTRVDP 547


>gi|187649792|sp|Q2T087|SYM_BURTA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 718

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 235/546 (43%), Gaps = 61/546 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    + +   D   KG      A  QY ++              NP   +     
Sbjct: 137 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  +FFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W +        H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
           ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N   
Sbjct: 430 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQSL 489
                 V++E  R L++ L+  +P++A  +   L +     AD N         R +Q L
Sbjct: 490 LHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHL 549

Query: 490 DQRLKP 495
             R+ P
Sbjct: 550 MTRVDP 555


>gi|258544167|ref|ZP_05704401.1| methionine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520609|gb|EEV89468.1| methionine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 675

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 219/503 (43%), Gaps = 43/503 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ ++ +++A+ Y N   H+GH  E I  D+  RF RL G +  +    D HG  I   +
Sbjct: 5   KKRRILVTSALPYANGAIHLGHMVEYIQTDIWVRFQRLRGHECHYVCADDAHGTPIMLRS 64

Query: 63  QNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  G+T +  +D++ S + RD    L I +  +  T    +      +++ + + G I +
Sbjct: 65  EKEGITPQQLIDKSHSEHLRDFRGFL-IDHHQYHSTHSAENRALTAAIYRALDNGGHILR 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWM---- 160
              S  +    + +  D  V       +   Q+                 NP   +    
Sbjct: 124 RTISQLFDPEKQLFLPDRFVKGECPKCHSKDQYGDNCEVCGTTYAPTDLINPYSALSGAT 183

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E YFF L A+   L  + +S     L    RN++  +   GL+   +SR    W
Sbjct: 184 PVERDSEHYFFDLPAFDAFLRDWLQSAQ---LQESMRNKLGEWFVEGLQPWDISRDAPYW 240

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   Y+       D  +     FW         H IGKDI  F
Sbjct: 241 GFEIPDAPGKYFYVWLDAPIGYMGAFRALCDRENLDFDAFWREGHDTELYHFIGKDIAYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L  A    P  V  HGF+   GEK+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HMLFWPAMLKGAGYRQPSGVNCHGFLTVNGEKMSKSRGTFIKAETYLKHLRPEYLRYYFA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D  +++VN+DL   + NL SR    I K +DG +    A    D++
Sbjct: 361 SKLSARVEDLDLNLDDFRQKVNSDLVGKLVNLASRCAPFISKHFDGAL----AAALPDDA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           + +  +    ++    + +    A+  ++ L    + Y DA+KPW   K +  RA+   +
Sbjct: 417 LFNQFAAKADDLASAYEQREYSSAIRDIMKLADAANEYIDAEKPWVKIKDDASRAAVQGI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLA 470
             V +   RQL   L+  +P++A
Sbjct: 477 ATVGINAFRQLITYLKPVLPQVA 499


>gi|312959251|ref|ZP_07773769.1| Methionyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311286511|gb|EFQ65074.1| Methionyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 683

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 223/506 (44%), Gaps = 44/506 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T  ++  +  + +  D A+ L + +D+F  T  + + +    ++ ++ + G I
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFL-VDFDNFHSTHCEENRELSSQIYLRLKEAGHI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQ---------- 158
            +   + ++    + +  D  +       G + QY        A + P            
Sbjct: 120 DQRSVTQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISG 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + + +FF+L  +Q  L ++  S     L     N++  ++ SGL+   +SR   
Sbjct: 180 ATPVLKDSQHFFFKLPDFQQMLQTWTRSG---TLQDAVANKLSEWLDSGLQQWDISRDAP 236

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +G +IP +P    YVW+DA   Y+ +   L    P+     FW  D      H IGKDI
Sbjct: 237 YFGFEIPGEPGKFFYVWLDAPIGYMASFKNLCDRTPELDFDAFWGKDSTAELYHFIGKDI 296

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA    +    P  +  HG++   G+K+SKS G  I     ++ +  + LRY
Sbjct: 297 VNFHALFWPAMREGSGYRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLAPEYLRY 356

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++  G D    + +   ++VN+DL   + N+ SR    I K   G++    A  E 
Sbjct: 357 YYASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAENAAPEL 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444
            ++ L+        I +  + +   RA+ +++ L    + +   + PW L K    +A  
Sbjct: 417 TDAFLAAAP----SIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQAEV 472

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLA 470
             +    V + RQL I L+  +P LA
Sbjct: 473 QAICATGVNLFRQLVIFLKPVLPLLA 498


>gi|326796149|ref|YP_004313969.1| Methionyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546913|gb|ADZ92133.1| Methionyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 683

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 226/507 (44%), Gaps = 50/507 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  D+  RF +L G         D HG  I   
Sbjct: 3   QTQRKILVTSALPYANGPIHLGHMLEHIQTDIWVRFQKLRGHVCNAVCADDAHGTAIMIR 62

Query: 62  AQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A+  G+T +  +D   + + +D  D L I YD++  T    + +    +++ + D G I 
Sbjct: 63  AEQNGITPEELIDGVRAEHMKDFNDFL-IGYDNYHSTHSSENQELSSSIYQALRDNGKIS 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM-------- 160
               +  Y   ++  +  D   KG      A+ QY       +A + P++ +        
Sbjct: 122 VRSITQAYD-PEKGMFLADRFVKGTCPKCKAEDQYGDNCEVCSATYTPMEMINPRSVYSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + YFF+L  +Q+ L  +  S     L  +  N++  ++ SGL++  +SR   
Sbjct: 181 ATPIEKSSDHYFFKLPEFQEFLQKWTRSG---TLQTQVANKLSEWLDSGLQEWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-AKFWPADL-----HVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +  +L D  +G     +W  D      H IGKDI
Sbjct: 238 YFGFEIPDAPGKYFYVWLDAPIGYMASFKHLCDRTEGLNFDDYWAKDADSELYHFIGKDI 297

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L  A    P  V  HG++   G K+SKS G  I     +  +    LRY
Sbjct: 298 VNFHALFWPAMLDCAGYRTPTGVNVHGYVTVNGTKMSKSRGTFIMARTYLNHLDPQYLRY 357

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++    D    + +   +RVN+D+   + N+ SR+ S I K +D  + T  A  + 
Sbjct: 358 YYAAKLNSSVDDIDLNLEDFVQRVNSDVVGKVVNIASRTASFINKKFDSQLATDVAENDM 417

Query: 387 DESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-- 442
            +  ++    + +  E RE        +A+ + + L    + Y   Q PW L K+     
Sbjct: 418 IQDFINAGDTIAEFYETRE------YGKAIRETMRLADIANTYIADQAPWVLAKSEDTLP 471

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKL 469
           +   V  V++ +   LA  L+  +P L
Sbjct: 472 KVQEVCSVSLNLFAILATYLKPVLPTL 498


>gi|187649778|sp|A0Q556|SYM_FRATN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 673

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 234/515 (45%), Gaps = 48/515 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            IP  + Q   YVW+DA   Y+ +   Y +  +     FW  +      H IGKDI+ FH
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   
Sbjct: 299 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 358

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  +
Sbjct: 359 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPEL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
            S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V 
Sbjct: 415 ESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
              + + + L   L+  +P +   A +  +I F++
Sbjct: 475 SQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 509


>gi|308049567|ref|YP_003913133.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631757|gb|ADN76059.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 685

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 235/543 (43%), Gaps = 57/543 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K+ +++A+ Y N   H+GH  E I  D+  RF  L G    +    D HG  I   A
Sbjct: 4   ESRKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQNLRGNKCTYVCADDTHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q  G++ +  + Q S+  + D AD   I++D++  T    +    + +++++ + G I  
Sbjct: 64  QQLGMSPEEMIAQVSKEHQADFAD-FHIAFDNYHSTHSDENRQWAQEVYRRLQEGGYIKT 122

Query: 122 GCYSGWYSLRDEAYY-----------NDDEVYKGADGQYYNAQHNPVQ------------ 158
                 +    E +             D E   G + +     ++PV+            
Sbjct: 123 KVIEQLFDPEKEMFLPDRFVKGTCPKCDTEDQYGDNCENCGTTYSPVELKNPKSVLSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L  +++ L  +  S     L  E  N++  + + GL+   +SR    +
Sbjct: 183 PVLKESEHFFFDLPQFKEVLQQWTHSGA---LQSEMANKLNEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIPD-DPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268
           G +IP  D +   YVW+DA   Y+     L     D +   +W  D      H IGKDI+
Sbjct: 240 GFEIPGTDGKKFFYVWLDAPIGYMGAFQNLCERRDDLNFEDYWGQDSDAELYHFIGKDII 299

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  ANL  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 300 YFHSLFWPAMLHGANLRKPTNVFAHGYVTVNGAKMSKSRGTFIKARTYLDHLNPEYLRYY 359

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    D    + +   +RVNAD+   + N+ SR+   I K +DG +    A     
Sbjct: 360 YAAKLNDRIDDLDLNLEDFAQRVNADMVGKLVNIASRTAGFIAKRFDGKL----ADGIDQ 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+      + I    + +   +A+ ++++L  + + Y     PW+L K      +  
Sbjct: 416 PELLAEFQNAAETIANFYEGREYGKAIREIMALADKANAYIADAAPWQLAKQEGMEQKTQ 475

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI------------FDILFVADENRCFQSLDQRL 493
            V  + + + R L I L+  +P++A +              + +        F++L QR+
Sbjct: 476 EVCSMGIHLFRILMIYLKPVLPEIAKETETFLGAELTWDSINTVLTGHTINPFKALIQRI 535

Query: 494 KPG 496
           +P 
Sbjct: 536 EPA 538


>gi|257454862|ref|ZP_05620113.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447795|gb|EEV22787.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 703

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 226/512 (44%), Gaps = 52/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  R  +  G  V +    D HG  I   A+  
Sbjct: 3   KILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKSLGHQVTYVCADDAHGTAIMLKAEAN 62

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GVT  +   D  + + +D A  L + +D++  T    +    ++++ ++ + G I     
Sbjct: 63  GVTPEQQIADVKASHEKDFAGFL-VDFDNYYSTHSPENEHYSQLIYNRLYENGHISHKAV 121

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWMEEEG--- 164
              Y      +  D  V       GA  QY          YNA    NP   +       
Sbjct: 122 EQLYDPEKGLFLADRFVKGECPKCGAKDQYGDNCEVCGTTYNATELKNPYSTLSGATPVL 181

Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF L  + + L ++  +  E  L     N++  +  +GL +  +SR    +G K
Sbjct: 182 KSSIHYFFNLPNFNEFLQNW--TRKEGRLQTSIANKLQEWFDAGLANWDISRDAPYFGFK 239

Query: 220 IPD----DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD-------LHVI 263
           IP+    +P    YVW+DA   Y+ +   L +  G++      ++W  +        H I
Sbjct: 240 IPNTPASEPDKYFYVWLDAPVGYMASFKNLCDQQGAQLGLNFDEYWSKENHNNTEVYHFI 299

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FHA++WPA L  A    P  + +HGF+   GEK+SKS G  I     ++ +  +
Sbjct: 300 GKDIVYFHALFWPAMLEGAGFRTPTAINAHGFLTVNGEKMSKSRGTFIKADTYLQNLDPE 359

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SR    I K++   +    A
Sbjct: 360 YLRYYFASKLSASVEDINLDLEDFMQKVNSDLVGKVVNIASRCAGFIHKNHGSKL----A 415

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            T S+ ++L       ++I    + +   +A+  +++   + + Y D +KPW L K    
Sbjct: 416 LTISEPALLQQIIDAGEDIAAAYEAREFSKAMRLIMACADKANEYIDDKKPWALNKVEGQ 475

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           +A    V  V + + RQL + L   +P +  K
Sbjct: 476 QAEVQAVCTVALNIFRQLVVYLAPVLPLMCEK 507


>gi|284159400|ref|YP_441412.3| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83654898|gb|ABC38961.1| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 770

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 238/547 (43%), Gaps = 63/547 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   A+
Sbjct: 69  RRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAE 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 129 QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 188

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    + +   D   KG      A  QY ++              NP   +     
Sbjct: 189 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATP 247

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  +FFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 248 VRKTSTHHFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 305

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W +        H IGKDI
Sbjct: 306 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDI 365

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 366 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 425

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 426 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 481

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K +P  A 
Sbjct: 482 TNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAK-DPANAV 540

Query: 446 TV---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADEN---------RCFQS 488
            +     V++E  R L++ L+  +P++A  +   L +     AD N         R +Q 
Sbjct: 541 ALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQH 600

Query: 489 LDQRLKP 495
           L  R+ P
Sbjct: 601 LMTRVDP 607


>gi|218259406|ref|ZP_03475150.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225135|gb|EEC97785.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii
           DSM 18315]
          Length = 679

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 237/515 (46%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   H       ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGISFDIYSRTTSATHRQVASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 QPVMKETKHWYLPLDKWEPFLRQWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P D     ++YVW DA   Y++ T  L  P+  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVDGAEGKVLYVWFDAPIGYISNTKEL-LPESWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPAMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTEKYFEGKVPAAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L+  + V  ++   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLTDFANVKADVERLLDTYHFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|254247500|ref|ZP_04940821.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872276|gb|EAY63992.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 756

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 57  QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 116

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +    
Sbjct: 117 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSENIYLALQEAGLIAEREIE 176

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
             Y    E +   D   KG      A  QY ++              NP   +       
Sbjct: 177 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 235

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215
              + YFFRLS    +  S+       +   E  N++  ++    +S L D  +SR    
Sbjct: 236 KTSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 293

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL 
Sbjct: 294 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 353

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+
Sbjct: 354 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 413

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 414 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 469

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
             +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N     
Sbjct: 470 HPLVAKLRDAIAQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 529

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
               V++E  R L++ L+  +P++A  +
Sbjct: 530 ETCSVSLEAFRLLSLALKPVMPRVAEAV 557


>gi|297625905|ref|YP_003687668.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921670|emb|CBL56227.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 559

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 218/494 (44%), Gaps = 66/494 (13%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DVL  +G+DEHG  I   A   G+T +   D+  R   +    L +SYD + RTT 
Sbjct: 1   MSGNDVLLVSGSDEHGTAIQVKADAEGLTAQETADKYHRIIVEDLQGLGLSYDLYTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQ 148
             H    + +++ + D G I +    G  S        D            E  +G    
Sbjct: 61  LNHEAVTQEVFRTLYDNGYIIEKTQLGAISPSTGRTLADRYIEGTCPICGYEFARGDQCD 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
               Q +P+               ++E   +F  L A  ++L+++  S  ++      R 
Sbjct: 121 NCGNQLDPIDLINPHSRIDGEVPDFVETTHFFLDLPALAEELMTWLNSRKDW------RP 174

Query: 195 EVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTT----G 243
            V++F  +  K+L     T   DWGI IP     +D    +YVW DA+  YL+ +     
Sbjct: 175 NVLNFSYNFAKELKPRAITRDLDWGIPIPVEGWENDDMKRIYVWFDAVIGYLSGSIEWAR 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN--------------- 283
              +PD  KA  W  D      + +GKD + FH++ WP+ LL  N               
Sbjct: 235 RTGDPDAWKA--WWQDPEARSYYFMGKDNIVFHSVIWPSMLLGLNGEGSRGGTPSKWLGK 292

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           L LP +V S  F+  KG K+  S G VI   + + E G D LRY++       KD  +  
Sbjct: 293 LDLPTEVVSSEFLTMKGSKVDTSHGVVIYVGDFLREFGPDTLRYYIAVAGPENKDTDFTW 352

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D   +R N +LAN  GNLV+RS+SM  K+ +G IP        D  +L+        + +
Sbjct: 353 DEFVRRNNNELANEWGNLVNRSLSMAFKN-NGEIPPAHELLNVDAELLASSKAAFITVGK 411

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            ++      A+ + + +V+  ++Y   Q+PW+L   + DR  TVL   ++V+     LL 
Sbjct: 412 LIEECKFKAAITEAMRVVATANQYISQQEPWKLGD-DTDRRDTVLNTALQVVSDANTLLT 470

Query: 464 AFVPKLANKIFDIL 477
            F+P  A KIF++L
Sbjct: 471 PFMPHSAQKIFEML 484


>gi|126459772|ref|YP_001056050.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|187647758|sp|A3MVB7|SYM_PYRCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|126249493|gb|ABO08584.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 570

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 233/511 (45%), Gaps = 44/511 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ RL G DV+F +G+D HG  I   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +      ++    +IS+D +  T  + H    +  +K+I + G I+    
Sbjct: 63  LGVDPAEYAFKMHGVVAELFKRWNISFDLYTHTHSETHVAFVQEFFKRIYENGYIFTKDE 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159
              Y  RD+ +  D  +        Y+ A G Q  N     +P Q              W
Sbjct: 123 EMPYCPRDKIFLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLVEPRCAVCGSKPEW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                ++  L   +DK+  Y E +P   LP   +   ++ +K GLK  +++R    WGI 
Sbjct: 183 RLTRHWYLDLRRLEDKIRKYVEENPH--LPQNAKEMSLAMLKEGLKPRAVTRDN-KWGIP 239

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWP-ADLHVI---GKDILRF 270
              P      +YVW +A+  Y++         G ++   K+W   D  +I   GKD + F
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEHFKRLGKESEWEKYWRDPDTKIIFFVGKDNIPF 299

Query: 271 HAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326
           H I  PA LL+      LP    S  ++L++G+K SKS   G  ID  E +  +  D  R
Sbjct: 300 HVIILPALLLANGGGYTLPTTTASTEYLLYEGDKFSKSRRWGIWID--EALHLLPADYWR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + LV      +D  +      + VN  L + +GN V+R +S I     G++P PG   E 
Sbjct: 358 FILVYIRPENRDTSFTWAQALEIVNKVLNDDVGNYVNRVLSFIKSRMGGVVPPPGTPQEE 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+S L    ++ ++   + +   +  AL  V+ +  E +RY +A+ PW+L KT P+ A+ 
Sbjct: 418 DKSFLQAALQLFKKAERHYEAVELKDALHTVVEIAREGNRYLNARAPWDLLKTRPEEANA 477

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+Y     ++ LA  L   +P+   K+++++
Sbjct: 478 VMYHAYWSLKMLAAGLAPVIPESVEKMWEMM 508


>gi|170733778|ref|YP_001765725.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|226710897|sp|B1JWS3|SYM_BURCC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169817020|gb|ACA91603.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 716

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 19  QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +    
Sbjct: 79  GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIE 138

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
             Y    E +   D   KG      A  QY ++              NP   +       
Sbjct: 139 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 197

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215
              + YFFRLS    +  S+       +   E  N++  ++    +S L D  +SR    
Sbjct: 198 KTSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 255

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL 
Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 315

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+
Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
             +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N     
Sbjct: 432 HPLVAKLRDAIAQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
               V++E  R L++ L+  +P++A  +
Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAEAV 519


>gi|87118382|ref|ZP_01074281.1| methionyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86166016|gb|EAQ67282.1| methionyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 685

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 221/506 (43%), Gaps = 48/506 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  DV  RF +L G         D HG  I   
Sbjct: 3   QSQRKILVTSALPYANGSIHLGHMLEHIQTDVWVRFQKLRGHLCTAVCADDAHGTAIMIK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G T +  ++   +    MAD  D  I+YD++  T  + + +    ++K + D   I
Sbjct: 63  ADKNGETPEQLIEAVRQEH--MADFNDFMIAYDNYHSTHSEENRELSSHIYKTLRDNDKI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQ--- 158
                   Y    E +  D    KG      A+ QY          Y A    NPV    
Sbjct: 121 AVRSIVQAYDPEKEMFLAD-RFIKGTCPKCKAEDQYGDNCEVCSATYTAMEMINPVSVYS 179

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E E YFF+L  +Q  L  +  S     L  +  N++  ++ SGL++  +SR  
Sbjct: 180 GATPVEKESEHYFFKLPEFQAFLADWTRSG---TLQDQVANKLAEWLDSGLQEWDISRDA 236

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSK-----AKFWPADL-HVIGKD 266
             +G +IPD P    YVW+DA   Y+ +   L D  DG       AK    +L H IGKD
Sbjct: 237 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDRTDGLNFDDYWAKGADTELYHFIGKD 296

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L  A    P  V +HG++   G+K+SKS G  I     +  +    LR
Sbjct: 297 IINFHALFWPAMLECAGYRTPTAVNAHGYVTVDGKKMSKSRGTFIKARTYLNHLDPQYLR 356

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++    D    + +   +RVN+D+   + N+ SR+ S I K +D  + T  +  E
Sbjct: 357 YYFTAKLNATPDDIDLNLEDFIQRVNSDVVGKVVNIASRTASFINKKFDNQLATEVSEAE 416

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--R 443
             +S +         I +  + +   +A+ +V+ L    + Y   Q PW L K      +
Sbjct: 417 MIQSFIDAGDL----IADCFEKREYSKAIREVMRLADVANTYIADQAPWVLAKNEETLPK 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL 469
              V  V++ +   LA  L+  +P +
Sbjct: 473 VQEVCTVSLNLFSILATYLKPILPNM 498


>gi|74316878|ref|YP_314618.1| methionyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123759136|sp|Q3SKG8|SYM_THIDA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|74056373|gb|AAZ96813.1| methionyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 690

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 222/504 (44%), Gaps = 44/504 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+  
Sbjct: 4   QILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGTNCRYMCADDTHGTAIMLRAEKE 63

Query: 66  GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            +T +  + +  + + RD A    I +D +  T    + +    ++  + D G I     
Sbjct: 64  AITPEALIQRVWAEHTRDFAG-FHIGFDHYYSTHSDENREHASKIYLALKDAGLIEVKTI 122

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM------------- 160
           +  Y      +  D     E  K GA  QY        A ++P +               
Sbjct: 123 AQLYDPVKNLFLPDRFIKGECPKCGAADQYGDNCEVCGATYSPTELKNPVSAVSGATPVH 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E YFF+L   +  L  +  S     L  E  N++  +  +GL +  +SR    +G +
Sbjct: 183 KDSEHYFFKLGDCEAFLREWTTSG---TLQAEAANKMQEWFAAGLNNWDISRDAPYFGFE 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +        G     W         +H IGKDIL FHA+
Sbjct: 240 IPDAPGKYFYVWLDAPVGYMASFARYAKDHGLDFDAWWGKDSKTELVHFIGKDILYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332
           +WPA L  +   LP  V++HGF+   G+K+SKS G  I     +++ +  + LRY+   +
Sbjct: 300 FWPAMLKFSGHRLPTAVYAHGFLTVNGQKMSKSRGTFITASSYLDQGLNPEWLRYYYAAK 359

Query: 333 I-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D   + D    RVN+DL     N+ SR+   I K +DG +    A    +  ++
Sbjct: 360 LNGTMEDIDLNLDDFVARVNSDLVGKFINIASRTAGFIHKKFDGKL----ADGVGNIELI 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
                    I  + + +   +AL ++++L    ++Y   +KPWEL K +    R   V  
Sbjct: 416 GEFQAAADTIAAHYEARDYAKALREIMALADRANQYVADEKPWELAKDDAAVYRLHEVCT 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKI 473
           V + + R L + L+  +PKLA ++
Sbjct: 476 VALNLFRLLTLYLKPVLPKLAGEV 499


>gi|118497075|ref|YP_898125.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|118422981|gb|ABK89371.1| methionyl-tRNA synthetase [Francisella novicida U112]
          Length = 685

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 234/515 (45%), Gaps = 48/515 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 15  KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 74

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 75  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 133

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 134 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 192

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 193 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 250

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            IP  + Q   YVW+DA   Y+ +   Y +  +     FW  +      H IGKDI+ FH
Sbjct: 251 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFH 310

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   
Sbjct: 311 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 370

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  +
Sbjct: 371 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPEL 426

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
            S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V 
Sbjct: 427 ESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVC 486

Query: 449 YVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
              + + + L   L+  +P +   A +  +I F++
Sbjct: 487 SQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 521


>gi|317405565|gb|EFV85868.1| MetG protein [Achromobacter xylosoxidans C54]
          Length = 688

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 248/568 (43%), Gaps = 80/568 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRIL-------WKKISD 115
           +T +  V + +       +   I +D +  T    +     D  R L        + I  
Sbjct: 65  ITPQALVARYAAERPQYLNGFHIRFDHWHTTDSPENVALSQDIYRALKAQDLIETRSIEQ 124

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P   +               
Sbjct: 125 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLINPYSALTGATPVLKS 184

Query: 162 EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR 211
            + +FF+LS      +  +  +   +H    L  E   +   ++     ++ L D  +SR
Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGSNAHGGKHLQPEMLAKTREWLGAEDGEAKLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWPADL 260
               +GI+IPD P    YVW+DA   YL +              L +P GS  +     +
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPAGSTEQ-----V 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L  A    P  V  HGFI   GEK+SKS G  I P+  + E+
Sbjct: 300 HFIGKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYL-EL 358

Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G++A  +RY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ S I K +DG +
Sbjct: 359 GMNAEWMRYYIAAKLNARVEDMDFNPEDFIARVNSDLVGKYVNIASRAASFITKHFDGAL 418

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A++    ++ +  +   + IR   + +  +RA+ ++++    +++ FD  +PW L 
Sbjct: 419 ----AYSGDTAALAAEYAAQAESIRAAFEAREYNRAIREIMAYADRINQAFDTAQPWVLA 474

Query: 438 K--TNPDRAST-----VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------- 483
           K     D A       +   ++   + L+++L   +P LA ++   LF AD +       
Sbjct: 475 KGIATADEAQKAALQDICSRSLAGFKALSVMLAPVLPALAERVARELFAADADFTWADAA 534

Query: 484 ------RCFQSLDQRLKPGFMLHKTFDP 505
                   F+ L QR++P  ML   F+P
Sbjct: 535 VLPQRVAPFKHLMQRVEPQ-MLEDLFEP 561


>gi|187929666|ref|YP_001900153.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309781566|ref|ZP_07676301.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187726556|gb|ACD27721.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308919671|gb|EFP65333.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 710

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 234/533 (43%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 21  MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 79

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C+ ++ K+ + G I
Sbjct: 80  RAEKEGLTPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENKELCQNVYLKLKEAGLI 138

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 139 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 198

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    ++ L D  +S
Sbjct: 199 ATPVRKSSEHYFFKLS--DPRCENFLRDWVADLAQPEATNKMREWLGEEGEAKLSDWDIS 256

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W          H IG
Sbjct: 257 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCAKRGLDFDAWINEHSTTEQYHFIG 316

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 317 KDILYFHTLFWPAMLKFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 376

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 377 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVSDAAL 436

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
                  ++        +I +  + +   +AL  V+ L   V+ + D +KPW+L K   N
Sbjct: 437 ----GHPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAFVDTEKPWDLAKDEAN 492

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            ++      V +E  R LA+ L+  +P    +I   L V  E   ++S+D +L
Sbjct: 493 REKLHAACSVALEAFRLLAVYLKPILPTTVERIEAFLNV--EPLTWRSIDSQL 543


>gi|182420091|ref|ZP_02951325.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669544|ref|ZP_04529524.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376128|gb|EDT73715.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237654988|gb|EEP52548.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 542

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 233/511 (45%), Gaps = 51/511 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I  A  Y N + H+G    ++  DVLAR+HRL G DV+F +G+D HG  +   A+  G++
Sbjct: 5   IGNAWPYANGELHLGRIAVLLPGDVLARYHRLMGDDVVFVSGSDSHGTPVTMKAKAEGMS 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +          ++  + L  S+D F +T  + H        K++ DKG IY+      Y
Sbjct: 65  PEEASLHYHEKIKECFEGLGFSFDIFTKTHTEYHSKKVSEFIKELYDKGYIYEKEVEQTY 124

Query: 129 SLRDEAYYND----------------------DEVYKGAD---GQYYNAQHNPVQWMEEE 163
             +   Y  D                       E+++  +    +    +  PV   E +
Sbjct: 125 CPKCNEYLLDRYIEGKCPSCGSHAVGDQCDECSEIFESEELLEKKCIFCKSEPVI-KETK 183

Query: 164 GYFFRLSAYQDKLLSYY---ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             FF LS  ++ +   Y       E    I  R     ++  GL+D +++R  F+WG+ +
Sbjct: 184 HLFFALSKLENDVKRIYIRQNGWRENAQKITNR-----YLNEGLRDRAVTR-DFNWGVDV 237

Query: 221 P----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           P    +D +  +YVWI+A+  YLT +   LD  D    ++W  +      V GKD + FH
Sbjct: 238 PFEGFEDKK--IYVWIEAVMGYLTASMKCLDERDEDYMEYWNGEDSRIYFVHGKDNIPFH 295

Query: 272 AIYWPAFLLSANLPLPK-KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + +PA L    +  P  +  S  ++  +G+  S      I P  ++E+  VD +RY+L+
Sbjct: 296 TVIFPAILSGLGIKRPNIREISSEYMKLEGKNFSAVKNWAIWPDYLMEKYNVDLIRYYLI 355

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 KD  +         N +L    GNL++R ++ I K++DG IP        D++ 
Sbjct: 356 SNGPEVKDTDFTWKSFIHANNNELVGLFGNLINRVLAFIDKNFDGNIPKGSV----DKAF 411

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                ++  ++ +N++     +AL  + S + + ++YFD +KPW   K + D+ S  +Y 
Sbjct: 412 KDDMFKLYCDVGDNIEEGNFKKALEYIFSAIKKANKYFDDEKPWVNIKKDRDKCSECMYT 471

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++I  L+ L++ F+P  A KI   L + +
Sbjct: 472 CIQIIANLSNLIEPFLPFAAKKIRGFLEIKN 502


>gi|17547100|ref|NP_520502.1| methionyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|25009371|sp|Q8XWT9|SYM_RALSO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|17429401|emb|CAD16088.1| probable methionyl-trna synthetase (methionine--trna ligase)(metrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 688

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 238/537 (44%), Gaps = 58/537 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C  ++ K+ + G I
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEAGLI 118

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLRDWVGDLAQPEATNKMREWLGDEGESTLSDWDIS 236

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 297 KDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRV----- 411

Query: 383 FTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              +D ++ +     L+E    I +  + +   +AL  V+ L   V+ Y D +KPW+L K
Sbjct: 412 ---NDAALANPLMVQLREAAPQIADLYEKREYSKALRTVMELADAVNAYVDTEKPWDLAK 468

Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                D+      V +E  R LA+ L+  +P    +I   L +   N  ++++D +L
Sbjct: 469 DEAQRDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNIEPLN--WRAIDAQL 523


>gi|153000977|ref|YP_001366658.1| methionyl-tRNA synthetase [Shewanella baltica OS185]
 gi|187647771|sp|A6WP56|SYM_SHEB8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|151365595|gb|ABS08595.1| methionyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 689

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 238/508 (46%), Gaps = 49/508 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   AQ
Sbjct: 5   QRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQ 64

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             G+  +  + Q N  + +D AD  ++++D++  T  + +      ++ K+ D G I   
Sbjct: 65  QLGIAPEDMIAQVNKEHQQDFAD-FNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM---------- 160
             S  +   +++ +  D   KG      +  QY        A ++P + +          
Sbjct: 124 SISQLFD-PEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSG---ALQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L    P+ S  +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   D    + +   +RVN+DL   + NL SR+   I K ++G +       + ++
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFNGKL------AKIND 413

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           + L+      Q++  +  +++   +A+ ++++L    + +     PW++ K +   + A 
Sbjct: 414 TTLTEAFLAKQDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V    + + R L   L+  +P+LA  +
Sbjct: 474 QVCSNALNLFRILVTYLKPVLPRLAQDV 501


>gi|326574245|gb|EGE24193.1| methionyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 683

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 227/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR T
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDT 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L K    
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508


>gi|326572648|gb|EGE22637.1| methionyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 683

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 227/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR  
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L KT   
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKTGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508


>gi|119505636|ref|ZP_01627707.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458579|gb|EAW39683.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 547

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 224/504 (44%), Gaps = 49/504 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y NA  H+GH  E +  D+  RF R  G   L+    D HG  I  AA+ + 
Sbjct: 8   ILVTSALPYANAPLHLGHILEQVQTDIWVRFQRSRGNHCLYVCADDAHGTAIMLAAEKSE 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + +  ++    N    +    I++D++  T    +      ++ ++  +G I     + 
Sbjct: 68  TSPEEHIEAVRLNHLADSTGFLINFDNYGSTHSPENQKWSNEIFSRLEAQGHIGSREITQ 127

Query: 127 WYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------- 161
            +   D+  +  D   KG      A  QY        A ++P   ++             
Sbjct: 128 AFD-PDKGLFLADRFIKGTCPRCKAPDQYGDNCEACGATYSPTDLIDPVSALSGAVPIEK 186

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E  FF+LS +Q+ L  +  S     L    RN++  ++ +GL+D  +SR    +G +I
Sbjct: 187 ASEHLFFQLSHFQELLEDWTASGS---LQPAIRNKLSEWIDAGLQDWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           P  P    YVW+DA   Y+ +   Y    +    K+W         H IGKDI+ FH ++
Sbjct: 244 PGHPGKYFYVWLDAPIGYIASCLDYCQRENEDFDKWWQLGHDTELYHFIGKDIINFHGLF 303

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L +A L LP  +++HGF+   G K+SKS G  I     ++ +  + LRY+   ++ 
Sbjct: 304 WPAMLQAAGLRLPTAIYAHGFLTVDGTKMSKSRGTFIHASAYLKHLDPEYLRYYFAAKLG 363

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            G  D   + D   KRVN+DL   + N+ SR    + K +   +          +  ++ 
Sbjct: 364 AGVDDFDLNLDDFVKRVNSDLVGKVVNIASRCAGFLRKKFANTLSDHCEEPALVQGFIAA 423

Query: 394 CSRV--LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVL 448
              +  L E RE        RA+ ++I+L  + ++Y D +KPW L K  P + S    V 
Sbjct: 424 GDDIAALYEARE------FSRAMREIIALADQANQYIDEKKPWVLAK-EPGKESEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
            V + + R L   L+  +P +A +
Sbjct: 477 SVGINLFRVLITYLKPVLPVMAER 500


>gi|89255854|ref|YP_513216.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|254367221|ref|ZP_04983250.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|123094534|sp|Q2A4Y6|SYM_FRATH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89143685|emb|CAJ78884.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134253040|gb|EBA52134.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
          Length = 674

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 236/516 (45%), Gaps = 49/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 63  GITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME----------- 161
           +  Y    + +  D  V KG      A+ QY        A ++P + +            
Sbjct: 122 AQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI 180

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR    +G 
Sbjct: 181 QKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGF 238

Query: 219 KIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRF 270
            IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKDI+ F
Sbjct: 239 AIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 299 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 358

Query: 331 REIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +    D    + +    + N+D+   + N+ SR    I K +D  + +   F   D  
Sbjct: 359 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPE 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 415 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
               + + + L   L+  +P +     +  +I F++
Sbjct: 475 CSQGINMFKVLIAYLKPIIPSIVAETERFLNIQFIS 510


>gi|298377830|ref|ZP_06987780.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265276|gb|EFI06939.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 679

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLREWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|255016240|ref|ZP_05288366.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 679

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSAMHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLREWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|126640836|ref|YP_001083820.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 669

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 230/530 (43%), Gaps = 69/530 (13%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT-TKVFVDQNSRNF 80
           +GH    I AD+  R  R  G DV +    D HG  I   A+  G++  +   +    + 
Sbjct: 1   MGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANGISPEEQIANVQKEHI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY-----------KGCY----- 124
           RD  D   + +D +  T    +      ++ K  + G+I            KG +     
Sbjct: 61  RDF-DGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPVTQLFDPEKGMFLSDRF 119

Query: 125 --SGWYSLRDEAYYNDD-EVYKGADGQYYNAQH--NPVQWME--------EEGYFFRLSA 171
                   + E  Y D  EV     G  YNA    NP   +          + YFF+L  
Sbjct: 120 IKGTCPKCKSEDQYGDSCEVC----GTTYNATELLNPRSTLSGATPVEKSSDHYFFKLPN 175

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           + + L  +  +  E  LP+   N++  + ++GL D  +SR    +G +IPD P    YVW
Sbjct: 176 FAEYLQKW--TRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGFEIPDAPNKYFYVW 233

Query: 232 IDALTNYLTT-TGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN 283
           +DA   Y+++   Y+    PD +   FW  D      H IGKDI+ FHA++WPA L  AN
Sbjct: 234 VDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYFHALFWPAMLEGAN 293

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
              P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+   +++   +D   +
Sbjct: 294 YRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFASKLSDKVEDSDLN 353

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--E 400
            D   ++VN+DL   + N+ SR    I   ++  + +  A ++  +S +     +    E
Sbjct: 354 LDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQSFIDAGDSIAAAYE 413

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQL 458
            RE         A+ ++++L    ++Y D +KPW L K          V  V + + RQL
Sbjct: 414 ARE------FSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDVCSVGINLFRQL 467

Query: 459 AILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQRLKP 495
           A+ L   +P LA ++ D L              V+ E   FQ L QR+ P
Sbjct: 468 AVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQRVDP 517


>gi|302339380|ref|YP_003804586.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636565|gb|ADK81992.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 736

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 239/518 (46%), Gaps = 54/518 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I++A+ Y N  PH+G+  +++ ADV +RF RL G + L+  GTDE+G      A 
Sbjct: 2   KKKRLITSALPYVNNIPHLGNLIQVLSADVFSRFCRLKGYETLYVCGTDEYGTATETRAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K   D+  +   ++    +I++D F RT+ +   D  + ++KK+   G I +  
Sbjct: 62  EEGVSPKELCDRYYKIHSEIYSWFNIAFDHFGRTSTQWQTDIVQDIFKKVDAAGYITEQT 121

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEE----GYFFR 168
               Y    + +  D  V        Y+ A G Q  N     +P   ++      G   +
Sbjct: 122 IEQLYCESCDRFLADRFVRGTCPHCGYEDARGDQCENCGKLLDPTDLIDPRCGLCGQTPK 181

Query: 169 LSAYQDKLLSYYESHPEFILPIER--------RNEVI---SFVKSGLKDLSLSRKTFDWG 217
           L +     L   +  P     I++        RN +    S+++ GLK+  ++R    WG
Sbjct: 182 LRSTSHLYLDLPKIRPRLEEWIDKASVEGFWARNAIQMTRSWIRDGLKERCITRD-LKWG 240

Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADL-HVIGK 265
           I +P  P Y   + YVW DA   Y++ T  L         NPD         DL   IGK
Sbjct: 241 IPVPK-PGYEGKVFYVWFDAPIGYISITANLTDEWETWWKNPD-------EVDLFQFIGK 292

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH + +P+ L+++  N  L   + S  ++ ++  K SKS G  V         +  
Sbjct: 293 DNIPFHTVIFPSSLIASGDNWTLLHHMSSTEYLNYESGKFSKSKGIGVFGTDARDTGIPA 352

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R+++        D  +     +++VN +L   +GNLV+R+++ + + YDG +P    
Sbjct: 353 DVWRFYIFYNRPEKSDALFTWSDFQEKVNGELIGNLGNLVNRTLTFVSRFYDGKLPEAAI 412

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
               D  + +       EI E+ +   +  A  ++ +L S  ++ F   +PW+L+K NP+
Sbjct: 413 ----DADMAAWIREREAEITEHFERAELRDAFRKIFALSSYGNKAFQEGEPWKLRKENPE 468

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            A+T+L   V ++R L +L++ F+P+ + ++     + 
Sbjct: 469 AAATLLSTLVYLVRDLGVLVEPFIPETSGRMLSFFGIG 506


>gi|304382941|ref|ZP_07365423.1| methionine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335966|gb|EFM02214.1| methionine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 681

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 246/517 (47%), Gaps = 51/517 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+ A+ Y N   HIGH A   I +D+ AR+ RL G +V F  G+DEHG  I  
Sbjct: 4   KKYKRTTITAALPYANGGVHIGHLAGVYIPSDIYARYLRLKGEEVAFICGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT + H+      ++K+ D G + 
Sbjct: 64  RARKEGITPQDVVDRYHTLIKKSFEDFGISFDIYSRTTSETHNRFASDFFRKLYDDGKLM 123

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM--------- 160
           +     +Y      +  D  +        ++GA G   +   +  +P + +         
Sbjct: 124 EKTSRQYYDEEAHQFLADRYITGECPHCHHQGAYGDQCEKCGSDLDPTELINPKSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ+ L ++  E H E+      R+ V    KS L DL L  +  
Sbjct: 184 KPVMKDTKNWYLPLNDYQEWLRTWILEDHKEW------RSNVYGQCKSWL-DLDLQPRAM 236

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIG 264
               DWGI +P +     ++YVW DA   Y++ T  L  PD S  K+W       +H IG
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-YPD-SWEKWWKDPETRLIHFIG 294

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +P  L +     LP+ V ++ F+  + +KIS S    +   E +EE    
Sbjct: 295 KDNIVFHCIVFPVMLKAHGGYILPENVPANEFLNLEDDKISTSKNWAVWLHEYLEEFPGK 354

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     ++R N +L    GN V+R++ +  K ++G++P  G
Sbjct: 355 QDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTQKYFNGVVPACG 414

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWELKKTN 440
             T+ D   L     V Q++ E + N    R A  + ++L    ++Y    +PW++ K +
Sbjct: 415 ELTDIDCQTLDELKTVKQKV-EGLLNVFKFRDAQKEAMNLARIGNKYITDCEPWKVAKDD 473

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             R  T+L+V+++++  L+I+ + F+P  +  + ++L
Sbjct: 474 MKRVETILHVSLQLVANLSIVFEPFLPFSSKTLREML 510


>gi|167835830|ref|ZP_02462713.1| methionyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 718

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 219/510 (42%), Gaps = 47/510 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 77  QEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAERE 136

Query: 124 YSGWYSLRDEAY------------------YNDDEVYKGADGQYYNAQH--------NPV 157
               Y    E +                  Y D     G   Q  +  H         PV
Sbjct: 137 IEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPV 196

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
           +      YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 197 RRTSTH-YFFRLS--DPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCEQRGIDFDAWINKDSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +++     + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N   
Sbjct: 430 MNHPLVATLRDAIAQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPVNAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 V++E  R L++ L+  +P++A  +
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVAEGV 519


>gi|300703367|ref|YP_003744969.1| methionyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071030|emb|CBJ42339.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum CFBP2957]
          Length = 688

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 233/533 (43%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C  ++ K+ +   I
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENRELCERVYLKLKEADLI 118

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 119 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    +S L D  +S
Sbjct: 179 ATPVRKSSEHYFFKLS--DPRCETFLREWVADLAQPEATNKMREWLGDEGESTLSDWDIS 236

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W +        H IG
Sbjct: 237 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIG 296

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 297 KDILYFHTLFWPAMLQFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 356

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 357 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAAL 416

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
                  ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K    
Sbjct: 417 ----GNPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQ 472

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            D+      V +E  R LA+ L+  +P    +I   L V   N  ++++D +L
Sbjct: 473 RDKLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNVEPLN--WRAIDAQL 523


>gi|116690457|ref|YP_836080.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|162218052|ref|YP_621702.2| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|187647708|sp|A0K9L0|SYM_BURCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649797|sp|Q1BUH6|SYM_BURCA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116648546|gb|ABK09187.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 718

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 221/505 (43%), Gaps = 47/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 19  QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +    
Sbjct: 79  GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIE 138

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
             Y    E +   D   KG      A  QY ++              NP   +       
Sbjct: 139 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 197

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215
              + YFFRLS    +  S+       +   E  N++  ++    +S L D  +SR    
Sbjct: 198 KTSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 255

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL 
Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 315

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+
Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
             +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N     
Sbjct: 432 HPLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLA 470
               V++E  R L++ L+  +P++A
Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVA 516


>gi|256842391|ref|ZP_05547894.1| methionyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256735998|gb|EEU49329.1| methionyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 679

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|262384701|ref|ZP_06077834.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262293682|gb|EEY81617.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 679

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPVAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|150009383|ref|YP_001304126.1| methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|187647739|sp|A6LFP0|SYM_PARD8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|149937807|gb|ABR44504.1| Methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 679

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYIMGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPVAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|154493526|ref|ZP_02032846.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC
           43184]
 gi|154086736|gb|EDN85781.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC
           43184]
          Length = 679

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 237/515 (46%), Gaps = 43/515 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   H       ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGISFDIYSRTTSATHRQVASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           +E   G   +      +P   +         
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLINPKSAISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR   
Sbjct: 183 QPVMKETKHWYLPLDKWEPFLRQWILEGHKEWKPNV--YGQCKSWLDMGLQPRAVSRD-L 239

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  L  P+  +   W  D     +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPESWET--WWKDPETKMVHFIGKDN 296

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH I +PA L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D 
Sbjct: 297 IVFHCIVFPAMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDV 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T
Sbjct: 357 LRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTEKYFEGKVPAAGELT 416

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D   L+  + V  ++   +       A  + ++L    ++Y    +PW+L KT+  R 
Sbjct: 417 DYDRQTLTDFANVKADVERLLDTYHFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARV 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 477 ATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|319760594|ref|YP_004124532.1| methionyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039308|gb|ADV33858.1| methionyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 549

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 222/504 (44%), Gaps = 44/504 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
             +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+    V F    D HG  I   A
Sbjct: 2   SNKKILVTCALPYANNSLHIGHMLEHIQADIWVRYQRMQNNTVYFICADDAHGTAIMLKA 61

Query: 63  QNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           Q   +  K+ +      ++++  D  +ISYD++  T  K + +    ++ K+ + G I  
Sbjct: 62  QQLNINPKIMISNIQKEHYKNCYD-FNISYDNYHSTHSKENRELLYEIYLKLKNNGLIKT 120

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEG------ 164
              S  Y  + + +  D  +             G + +   A + P++ ++ +       
Sbjct: 121 RFISQLYDSKKKIFLPDRFIIGTCPKCHTSNQYGDNCEQCGAIYTPMELIDPKSVISGTT 180

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                   +FF L  +   L  +  S    +L  E  N++  + K GLK+  +SR +  +
Sbjct: 181 PITKKSKHFFFNLPIFTKMLQHWVYSG---VLQQEILNKIEEWFKLGLKEWDISRDSPYF 237

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G KIP+      YVW+DA   Y+ T   L   N +     FW         H IGKDI+ 
Sbjct: 238 GFKIPNTGSKYFYVWMDATIGYMGTFKNLCKKNKNIFFEDFWDIHSKNELYHFIGKDIIY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  +F HG +   G KISKS G  I     +  +  D LRY+ 
Sbjct: 298 FHSLFWPAILEGSQFRKPTGIFVHGHVTLNGLKISKSKGAFIKANTYLSYLHSDYLRYYY 357

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +    ++N+D+ N I NL +RS S I +  DG + +       D 
Sbjct: 358 ATKLSSKINDIDLNFNDFFNKINSDIINKILNLAARSASFINQYNDGQLSS----KIEDP 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRAST 446
           ++ +        I +  +N+    A+  ++SL  E ++Y D   PW +  +      A +
Sbjct: 414 NLYNFFINFKHSIGKAFKNREFSEAMRSIMSLADEANKYIDQHSPWHIIHQIGEIKNAVS 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470
           +  + +++ R L   L+  +P L+
Sbjct: 474 IASMGIQLFRILMTYLKPVLPILS 497


>gi|134296619|ref|YP_001120354.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|187647710|sp|A4JGW6|SYM_BURVG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134139776|gb|ABO55519.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 721

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 219/508 (43%), Gaps = 47/508 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 19  QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEME 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +    
Sbjct: 79  GLTPKQLIDRVWAEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALKENGLIAEREIE 138

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME------ 161
             Y    E +   D   KG      A  QY ++              NP   +       
Sbjct: 139 QAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTDLLNPYSVVSGATPVR 197

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215
                +FFRLS    +  S+       +   E  N++  ++    ++ L D  +SR    
Sbjct: 198 KTSTHHFFRLS--DPRCESFLRDWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPY 255

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL 
Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERKGINFDAWVRPGATAEQYHFIGKDILY 315

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+
Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
             +++     +  I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N     
Sbjct: 432 HPLVAKLRSAIDSIAAHYEAREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVALH 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
               V++E  R L++ L+  +P++A  +
Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAQAV 519


>gi|119356838|ref|YP_911482.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|187647713|sp|A1BF81|SYM_CHLPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119354187|gb|ABL65058.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 702

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 246/541 (45%), Gaps = 63/541 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G +++   G+DEHG  I   A+
Sbjct: 5   KRTLVTTALPYANGPVHLGHLAGVYLPADLYVRYKRLKGDNIIHIGGSDEHGVPITLTAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  VD+      D      IS++ + RTT   HH T R  + +I +KG   +  
Sbjct: 65  KEGISPRDVVDRYHGMNLDAFTKCGISFNYYGRTTSAVHHATAREFFSEIENKGMFTRKT 124

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG-------- 164
              ++  +   + +D  +             G   +      +P++ +  +         
Sbjct: 125 EKQFFDKKANRFLSDRYITGTCPICSNPDANGDQCEQCGTHLSPLELINPKSKLSDATPE 184

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTF 214
                 ++F L  +Q +L SY +SH +     E R  VI++    +K GL D +++R   
Sbjct: 185 LRETLHWYFPLGRFQSELESYVQSHDK-----EWRPNVINYTRTWLKQGLNDRAITRD-L 238

Query: 215 DWGIKIP-DDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LHVI 263
            WGIK+P + P+    ++YVW DA+  Y++ T       G      ++W       ++ I
Sbjct: 239 SWGIKLPLETPEASGKVLYVWFDAVLGYISFTKEWAAQSGQPELWREYWQDPECRMINFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   + 
Sbjct: 299 GKDNVVFHTLMFPAILMAWNKGRKTDLYNLADNVPASEFMNFEGRKFSKSRNYAVYLGDF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+   D LRY +       KD  +     + R N +LA+ +GN + RS+      +DG 
Sbjct: 359 LEKFPADTLRYCIAMNYPENKDSDFSWLDFQNRTNGELADTLGNFIKRSIDFTNSRFDGK 418

Query: 377 IPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +P     T  +  I  +     L+++ +  +      A +  + +    +R+    +PW+
Sbjct: 419 VPC--ECTPEEWKIPGIDWKETLEKLDQAFEAFHFREATSLGMDIARTANRFLTESEPWK 476

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + K++ + A+  + +++ +   LA++L   +P+ AN+I  +L V       +S+D +L  
Sbjct: 477 VIKSDREGAAKTMAISLNLCYALALVLYPVIPETANRILAMLGVE------KSIDDQLDS 530

Query: 496 G 496
           G
Sbjct: 531 G 531


>gi|281421486|ref|ZP_06252485.1| methionine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404558|gb|EFB35238.1| methionine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 688

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 238/517 (46%), Gaps = 52/517 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  +  
Sbjct: 4   KNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVVFIGGSDEHGVPVTI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   H+      ++ + DKG + 
Sbjct: 64  RAKKEGITVQEVVDRYHNLIKKSFEDFGISFDIYSRTTSPTHNKFASDFFRTLYDKGVLE 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNA------------------QHNPV 157
           +     +       +  D  +       GA+G Y +                   ++NP 
Sbjct: 124 EKVEEQFCDEVTGEFLTDRNIVGTCPRCGAEGAYGDQCEKCGATLSPEELINPTNKNNPG 183

Query: 158 QWM---EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             +     + ++  L+ YQD L  +  E H E+      R  V    KS L D+ L  + 
Sbjct: 184 HGLVKKPTKNWYLPLNKYQDWLKKWILEGHKEW------RTNVYGQCKSWL-DMDLQPRA 236

Query: 214 ----FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD---- 259
                DWGI +P +     ++YVW DA   Y++ T  L   +P+  G+  K+W       
Sbjct: 237 MTRDLDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDAHPEKWGTWQKWWQDPETRL 296

Query: 260 LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +H IGKD + FH I +P  L +  +  LP  V ++ F+  + +KIS S    +   E + 
Sbjct: 297 VHFIGKDNIVFHCIIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLV 356

Query: 319 EV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G+
Sbjct: 357 DLPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWGGV 416

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E DE  ++    V +++ + +       A  + ++L    +RY    +PW++
Sbjct: 417 VPACGELQEVDEKAIAEFKDVKEKVEQYLNVFKFREAQKEAMNLARIGNRYITECEPWKV 476

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            KT+P R  T+L ++++++  LAI  + F+P  + K+
Sbjct: 477 WKTDPKRVETILNISLQLVANLAIAFEPFLPFSSEKL 513


>gi|206560985|ref|YP_002231750.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|226710898|sp|B4E8E0|SYM_BURCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|198037027|emb|CAR52948.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 718

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 221/507 (43%), Gaps = 45/507 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 19  QILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYIGADDTHGTPIMLRAEKE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +    
Sbjct: 79  GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYLALQEAGLIAEREIE 138

Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161
             Y    E +  D     E  K       G + +   + + P + +              
Sbjct: 139 QAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPVRK 198

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFDW 216
             + YFFRLS    +  S+       +   E  N++  ++    ++ L D  +SR    +
Sbjct: 199 TSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPYF 256

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRF 270
           G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL F
Sbjct: 257 GFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILYF 316

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           H ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+ 
Sbjct: 317 HTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYF 376

Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  + 
Sbjct: 377 AAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMNH 432

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
            +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N      
Sbjct: 433 PLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALHE 492

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
              V++E  R L++ L+  +P++A  +
Sbjct: 493 TCSVSLEAFRLLSLALKPVMPRVAAAV 519


>gi|254251693|ref|ZP_04945011.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894302|gb|EAY68182.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 901

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 225/511 (44%), Gaps = 49/511 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 198 RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 257

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +++     +   D   +S+D+F  T  + +      ++  + + G I +  
Sbjct: 258 KEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYTTDSEENRVLSEKIYVALKENGLIAERE 317

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 318 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 376

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  S+       +   E  N++  ++    ++ L D  +SR  
Sbjct: 377 VRKTSTHYFFRLS--DPRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDA 434

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDI
Sbjct: 435 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWVRPGSSAEQYHFIGKDI 494

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 495 LYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 554

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + D  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 555 YYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----SA 610

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +  ++      + +I  + + +   RAL   + L  EV+ Y D+ KPWEL K +P  A 
Sbjct: 611 MNHPLVVKLRDAIPKIAAHYEAREYGRALRHTMELADEVNAYVDSAKPWELAK-DPANAV 669

Query: 446 TV---LYVTVEVIRQLAILLQAFVPKLANKI 473
            +     V++E  R L++ L+  +P++A  +
Sbjct: 670 ALHETCSVSLEAFRLLSLALKPVMPRVAASV 700


>gi|145219579|ref|YP_001130288.1| methionyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|187647742|sp|A4SE77|SYM_PROVI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145205743|gb|ABP36786.1| methionyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 702

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/565 (24%), Positives = 249/565 (44%), Gaps = 78/565 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G DV+   G+DEHG  I 
Sbjct: 1   MPQFQRTLVTTALPYANGPVHLGHLAGVYLPADLFVRYKRLQGEDVIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+      +      IS+D + RT+ + HH T +  + +I  KG  
Sbjct: 61  ITAEKEGITPRDVVDRYHSMNLEAFKRCGISFDYYGRTSSELHHKTAQEFFLEIEGKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
            +     +Y      + +D  V             G   +      +P++ +  +     
Sbjct: 121 ERKTEKLFYDASACRFLSDRYVTGTCPICGNTEANGDQCEQCGTHLSPLELINPKSKLSD 180

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLS 210
                     ++F L  +Q +L ++  SH +     + R  V+++ ++    GL D +++
Sbjct: 181 ATPELRETLHWYFPLGRFQKQLEAFVGSHDD-----DWRANVLNYTRTWLNQGLNDRAIT 235

Query: 211 RKTFDWGIKIP-DDPQY---IMYVWIDALTNYLTTT--------------GYLDNPDGSK 252
           R    WGIK+P  DP+    ++YVW DA+  Y++                 Y  NPD   
Sbjct: 236 RD-LSWGIKVPLQDPEAEGKVLYVWFDAVLGYVSFAREWAVLQGSPDRWKEYWQNPDSRV 294

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISK 305
             F       IGKD + FH +  PA L++ N         L   V +  F+  +G K SK
Sbjct: 295 VNF-------IGKDNVVFHTLMLPAILMAWNEGRSDSIYNLADNVPASEFMNFEGRKFSK 347

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S    +   E +++   + LRY +       KD  +     + R N +LA+ +GN + RS
Sbjct: 348 SRNYAVYLGEFLDKFPAETLRYSIAMNYPENKDSDFSWTDFQNRTNGELADTLGNFIKRS 407

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           V      ++G++P   +  E D S+    +  + ++ E  +      A++  + +    +
Sbjct: 408 VDFTNSRFEGIVPHACSRQEWD-SLGINWADTIHQLDEAFEGFHFREAVSAAMDIARAAN 466

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           R+    +PW+  K + D A+  + +++ +   L+I L   +P+ AN+I  +L        
Sbjct: 467 RFLTGAEPWKAIKEDRDGAARTMALSLNLCHALSIALYPVLPETANRIHSML-------G 519

Query: 486 FQ-SLDQRLKPGFMLHKTF-DPIFP 508
           FQ +++   K G  L+K+  +P  P
Sbjct: 520 FQGTIESLFKRGVPLYKSLTEPALP 544


>gi|167585788|ref|ZP_02378176.1| methionyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 724

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 220/507 (43%), Gaps = 47/507 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 16  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +  
Sbjct: 76  KEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEQIYVALKENGLIAERE 135

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 136 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 194

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                + YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 195 VRKTSKHYFFRLS--DPRCEAFLRDWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDA 252

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L +  G     W          H IGKDI
Sbjct: 253 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRRGIDFDAWIRKGSTAEQYHFIGKDI 312

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 313 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 372

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + D  + RVN+DL     N+ SR+   +LK +DG +      + 
Sbjct: 373 YYFAAKLNATMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----SA 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +++     +  I  + + +   RAL   + L  EV+ Y D  KPWEL K   N   
Sbjct: 429 MNHPLVAKLRDAIPGIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 488

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLA 470
                 V++E  R L++ L+  +P++A
Sbjct: 489 LHETCSVSLEAFRLLSLALKPVMPRVA 515


>gi|105893564|gb|ABF76729.1| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 800

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 223/505 (44%), Gaps = 47/505 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+  
Sbjct: 101 QILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEKE 160

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +    
Sbjct: 161 GLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIE 220

Query: 126 GWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME------------- 161
             Y    E +  D     E  K       G   +   + + P + +              
Sbjct: 221 QAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVRK 280

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFDW 216
             + YFFRLS    +  S+       +   E  N++  ++    +S L D  +SR    +
Sbjct: 281 TSKHYFFRLS--DPRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPYF 338

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRF 270
           G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL F
Sbjct: 339 GFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILYF 398

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           H ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+ 
Sbjct: 399 HTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYF 458

Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++ A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  + 
Sbjct: 459 AAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMNH 514

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV- 447
            +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K +P  A  + 
Sbjct: 515 PLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAK-DPANAVALH 573

Query: 448 --LYVTVEVIRQLAILLQAFVPKLA 470
               V++E  R L++ L+  +P++A
Sbjct: 574 ETCSVSLEAFRLLSLALKPVMPRVA 598


>gi|301312294|ref|ZP_07218211.1| methionine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300829716|gb|EFK60369.1| methionine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 679

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 236/516 (45%), Gaps = 45/516 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYS------------------LRDEAYYNDDEVYKGA--------DGQYYNAQH 154
           +     +Y                     +E  Y D     G         D +   +  
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLKDPKSAISGS 182

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            PV   E + ++  L  ++  L  +  E H E+   +    +  S++  GL+  ++SR  
Sbjct: 183 KPVM-RETKHWYLPLDKWEPFLRKWILEDHKEWKPNV--YGQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y++ T  L  PD  +   W  D     +H IGKD
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKEL-LPDSWET--WWKDPETKMVHFIGKD 295

Query: 267 ILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVD 323
            + FH I +P+ L +  +  LP+ V ++ F+  +G+KIS S    +   E + ++    D
Sbjct: 296 NIVFHCIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  
Sbjct: 356 VLRYVLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGEL 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           T+ D   L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R
Sbjct: 416 TDYDRQTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPR 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +T++ + +++   LAI  + F+P    K+  +L V
Sbjct: 476 VATIMNIALQITANLAIAFEPFLPFSMEKLNKMLNV 511


>gi|241663776|ref|YP_002982136.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865803|gb|ACS63464.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 709

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 232/533 (43%), Gaps = 50/533 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 21  MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 79

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G+T +  +++  + + RD  + L +S+D++  T    + + C+ ++ K+ + G I
Sbjct: 80  RAEKEGLTPRQLIERVWTEHKRDFDNFL-VSFDNYYSTDSDENKELCQNVYLKLKEAGLI 138

Query: 120 YKGCYSGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWM-------- 160
                  +Y    E +  D     E  K GA  QY        A + P            
Sbjct: 139 DVREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSG 198

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                   E YFF+LS    +  ++       +   E  N++  ++    ++ L D  +S
Sbjct: 199 ATPVRKSSEHYFFKLS--DPRCENFLRDWVADLAQPEATNKMREWLGEEGEAKLSDWDIS 256

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIG 264
           R    +G +IP  P    YVW+DA   Y  +   L    G     W          H IG
Sbjct: 257 RDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCAKRGLDFDAWINEHSTTEQYHFIG 316

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  +
Sbjct: 317 KDILYFHTLFWPAMLKFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPE 376

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ A  +D   + D    RVN+DL     N+ SRS   ++K ++G +     
Sbjct: 377 WLRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVSDAAL 436

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
                  ++        +I +  + +   +AL  V+ L   V+ + D +KPW+L K    
Sbjct: 437 ----GHPLMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAFVDTEKPWDLAKDEAH 492

Query: 443 RAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           R        V +E  R LA+ L+  +P    +I   L V  E   ++S+D +L
Sbjct: 493 REKLHAACSVALEAFRLLAVYLKPILPTTVERIEAFLNV--EPLTWRSIDSQL 543


>gi|303236923|ref|ZP_07323502.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483091|gb|EFL46107.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 687

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 245/520 (47%), Gaps = 43/520 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + +D+  R+ RL   +VLF  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVLFVGGSDEHGVPITL 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  +D  +   IS+D + RTT + HH      ++K+ D+G + 
Sbjct: 64  RAKKEGITPQEVCDRYHKMIKDSFEEFGISFDVYSRTTSETHHKFASDFFRKLYDEGKLI 123

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWME-------- 161
           +      Y    + +  D           +E   G   +   +  +P++ +         
Sbjct: 124 EKESEQLYDEEAKQFLADRYVMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGS 183

Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                  + ++  L+ YQ+ L  +    H E+   +    +  S++   L+  +++R   
Sbjct: 184 KPVVKTTKNWYLPLNDYQEWLKQWILNDHKEWRPNV--YGQCKSWLDMDLQPRAMTRD-L 240

Query: 215 DWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----LHVIG 264
           +WGI +P +     ++YVW DA   Y++ T  L   NP+  G   K+W  D    +H IG
Sbjct: 241 NWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSNPERFGKWEKWWQDDETRLVHFIG 300

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--G 321
           KD + FH I +P+ L +  +  LP  V S+ F+  + +KIS S    +   E + +    
Sbjct: 301 KDNIVFHCIIFPSMLKAHGDYILPDNVPSNEFLNLENDKISTSRNWAVWLHEYLVDFPNK 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++P  G
Sbjct: 361 QDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTQKYWGGIVPACG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   +     V +++   +       A  + ++L    +RY    +PW++ KT+P
Sbjct: 421 ELQDVDRQTIQEFKDVKEKVESYLDVFKFREAQKEAMNLARIGNRYITECEPWKVWKTDP 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R  T+L ++++++  L+I  + F+P  + ++ +++ +A+
Sbjct: 481 KRVETILNISLQLVANLSIAFEPFLPFSSKELRNLINLAE 520


>gi|302346007|ref|YP_003814360.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149259|gb|ADK95521.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 687

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 237/524 (45%), Gaps = 51/524 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVAFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  +D  +   IS+D + RTT + HH      ++K+ D G + 
Sbjct: 64  RAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSETHHKFASDFFRKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ----------------HNPVQWM 160
           +     +Y      +  D     E     +   Y  Q                H+ +   
Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183

Query: 161 E-----EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
           +      + ++  L+ YQ+ L  +  E H E+      R  V    KS L D+ L  +  
Sbjct: 184 QPVIKRTKNWYLPLNDYQEWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L   D    G+  K+W       +
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEKDPEHFGNWQKWWQDPETRIV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318
           H IGKD + FH + +P  L +  +  LP  V S+ F+  + +KIS S    +   E +  
Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPSNEFLNLEDDKISTSKNWAVWLHEYLRD 356

Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            E   D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++
Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E D   +     V  ++   +       A  + ++L    ++Y    +PW+L 
Sbjct: 417 PACGELEEIDRQTIQEFKDVKAKVEAYLDIFKFREAQKEAMNLARIGNKYIAETEPWKLW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+P R  T+LY++++++  L+I  + F+P  + K+ +++ + +
Sbjct: 477 KTDPKRVETILYISLQLVANLSIAFEPFLPFSSKKLREMINMTE 520


>gi|163858414|ref|YP_001632712.1| methionyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163262142|emb|CAP44444.1| metG [Bordetella petrii]
          Length = 691

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 245/560 (43%), Gaps = 73/560 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILW-------KKISD 115
           ++ +  V + +       D   I +D +  T    +     D  R L        + I  
Sbjct: 65  ISPQELVARYAAERPRYLDGFHIRFDHWHSTDSAENVALSQDIYRALQAANLIETRAIEQ 124

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P   +               
Sbjct: 125 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLINPYSALTGATPVLKS 184

Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK---------SGLKDLSLSR 211
            E +FF+LS  +  + L ++ +          + EV +  +         + L D  +SR
Sbjct: 185 SEHFFFKLSDPRCVEFLQHWTTGVNAAGNKHLQPEVQAKTREWLGGDDGQAKLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWPADL 260
               +GI+IPD P    YVW+DA   YL +              L +P GS  +     +
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAKQGLDFDALLDPQGSTEQ-----V 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L  A    P  +  HGFI   GEK+SKS G  I P+  + ++
Sbjct: 300 HFIGKDIIYFHALFWPAMLKFAGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYL-DI 358

Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G++A  LRY++  ++ A  +D  ++ D    RVN+DL     N+ SR+ + I K +DG +
Sbjct: 359 GMNAEWLRYYIAAKLNARVEDIDFNPDDFVARVNSDLVGKYVNIASRAANFITKHFDGAL 418

Query: 378 PTPGAFTESDESILSV--CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                  E D + LS    +R  + IR   + +  +RA+ ++++    +++ FD  +PW 
Sbjct: 419 A-----YEGDTAALSAEFAARA-ESIRAAFEAREYNRAIREIMAYADGINQAFDTAQPWV 472

Query: 436 LKK-------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-- 486
           L K           R   +   ++   + L+++L   +P LAN++   LF A +   +  
Sbjct: 473 LAKGIGAADAAQKARLQDICSRSLAGFKALSVMLAPVLPALANRVARELFGAAQPFTWAD 532

Query: 487 -QSLDQRLKPGFMLHKTFDP 505
             +L +R+ P   L +  DP
Sbjct: 533 AAALPERVAPFKHLMQRVDP 552


>gi|260593431|ref|ZP_05858889.1| methionine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534707|gb|EEX17324.1| methionine--tRNA ligase [Prevotella veroralis F0319]
          Length = 687

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 236/520 (45%), Gaps = 51/520 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKRDVIFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  +D  +   IS+D + RTT K H+      ++K+ D G + 
Sbjct: 64  RAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSKTHNKFASDFFRKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160
           +     +Y      +  D     E     +   Y  Q              NP   +   
Sbjct: 124 EQESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ+ L  +  E H E+      R  V    KS L D+ L  +  
Sbjct: 184 QPVIKKTKNWYLPLNNYQEWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P       ++YVW DA   Y++ T  L + D    G+  K+W       +
Sbjct: 237 TRDLDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDSDPEHFGNWQKWWQDPETRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318
           H IGKD + FH + +P  L +  +  LP  V ++ F+  +  KIS S    +   E +  
Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRD 356

Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            E   D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++
Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGIV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E D   +     V  ++   ++      A  + ++L    ++Y    +PW++ 
Sbjct: 417 PACGELQEVDRLTIQEFKDVKAKVEAYLEVFKFREAQKEAMNLARIGNKYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           KT+P R  T+LY++++++  L+I  + F+P  + K+ +++
Sbjct: 477 KTDPKRVETILYISLQLVANLSIAFEPFLPFSSKKLRELI 516


>gi|241667151|ref|ZP_04754729.1| methionyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875704|ref|ZP_05248414.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841725|gb|EET20139.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 673

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 221/500 (44%), Gaps = 42/500 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G + +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNECIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  V++ S N +      +I +D++  T    + +    ++ K++ +  I K   +
Sbjct: 63  GITPEELVEKYSNNHQKDFLSFEIEFDNYHSTHSPINKEIVEDIYGKLNAQKLISKKEIA 122

Query: 126 GWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------------- 160
             Y    + +  D            E   G   +   A ++P + +              
Sbjct: 123 QAYDPEAKMFLPDRFVKGTCPKCKTEDQYGDSCEVCGATYDPTELINPKSVVSGKAPIQK 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E +FF L + +  +  + ES+   +L  E  N++  + + GL+   +SR    +G  I
Sbjct: 183 NSEHFFFDLPSLEKNIKDWIESNK--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI 240

Query: 221 P-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD------LHVIGKDILRFHA 272
           P  D Q   YVW+DA   Y+ +   Y D  +    +FW  +       H IGKDI+ FHA
Sbjct: 241 PGTDEQKFFYVWLDAPMGYIASFRDYCDKNNVDFNEFWGDNSCESELYHFIGKDIIYFHA 300

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+    
Sbjct: 301 LFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASR 360

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    D    + +    + N+D+   + N+ SR    I K +D  +    A    D+ + 
Sbjct: 361 LTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----ANEVLDKELE 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449
              ++  + I E  + +    A+  +++L  + +++ D  KPW+L K      +   V  
Sbjct: 417 KEFAKSHRAITEAFEKREFAHAVRLIMTLADKANQFIDHHKPWQLAKEEGQEQKVHQVCS 476

Query: 450 VTVEVIRQLAILLQAFVPKL 469
             + + + L   L+  VP +
Sbjct: 477 QGINMFKVLVAYLKPIVPSI 496


>gi|110834460|ref|YP_693319.1| methionyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|122959435|sp|Q0VP51|SYM_ALCBS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110647571|emb|CAL17047.1| Methionyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 686

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 227/502 (45%), Gaps = 45/502 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I   A+  
Sbjct: 14  KILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGQQCIYVCADDAHGTAIMLKAEEN 73

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTE-----------KRHHDTCRILWKKI 113
           GVT +  + Q  + + RD AD   +++D++  T             +R+ D   IL K I
Sbjct: 74  GVTPEQQIAQVKADHERDFAD-FQVNFDNYYSTHSPENRALSEMVFQRNKDAGYILEKTI 132

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +   D  KG +     ++        E   G + +   A + P + +E        +  +
Sbjct: 133 TQLYDPQKGMFLADRFVKGTCPKCKSEDQYGDNCEVCGATYTPAELIEPYSSVSGATPVE 192

Query: 174 DKLLSYYESHPEFILPIER-------RNEVISFVKSGLKDLS---LSRKTFDWGIKIPDD 223
            +    +   P+F   +         + +V + ++  ++DL    +SR+   +G +IP  
Sbjct: 193 KETTQLFFDLPKFEALLREWTRSGALQEQVANKLQEWIEDLQPWDISREAPYFGFEIPGY 252

Query: 224 PQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW----PADL-HVIGKDILRFHAIYWPA 277
           P    YVW+DA   Y+ +   Y D    S   +W     A+L H IGKDI+ FH ++WPA
Sbjct: 253 PGKYFYVWLDAPIGYMASFQNYCDREGLSFDDYWGKESTAELYHFIGKDIINFHGLFWPA 312

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L  A L  P  ++SHGF+   G K+SKS G  I     ++ +  + LRY+   +++   
Sbjct: 313 MLDGAGLRKPTAIYSHGFVTVNGAKMSKSRGTFIKARTYLDHLSPEYLRYYFAAKLSSRV 372

Query: 338 DGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           D F  + +   +RVN+DL   + N+ SR+ + + K + G +      TE D  +L    R
Sbjct: 373 DDFDLNLEDFAQRVNSDLVGKLVNIASRTGNFV-KKFGGTLS-----TELDNMML---VR 423

Query: 397 VLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYV 450
            +QE    I +  + +   +A+ ++++L    + Y   + PW L K          +   
Sbjct: 424 EVQEAGPRIADFYEKREFGKAMREIMALADHANVYIADKAPWSLSKEEGKEQEVLAICST 483

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            + V R L I L+  +P LA +
Sbjct: 484 AINVFRLLVIYLKPVLPALAER 505


>gi|325523984|gb|EGD02180.1| methionyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 718

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 221/510 (43%), Gaps = 47/510 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +++     +   D   +S+D+F  T  + +      ++  + + G I +  
Sbjct: 77  KEGLTPKQLIERVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSEKIYLALKENGLIAERE 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQH------------NPVQWME---- 161
               Y    E +   D   KG      A  QY ++              NP   +     
Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  YFFRLS    +  S+       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHYFFRLS--DPRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGVDFDAWIRPGSTAEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 374 YYFAAKLNATMEDLDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +++     + +I    + +   RAL   + L  EV+ Y D  KPWEL K   N   
Sbjct: 430 MNHPLVAKLRDAIPQIAAQYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 V++E  R L++ L+  +P++A  +
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVMPRVAEAV 519


>gi|284164098|ref|YP_003402377.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284013753|gb|ADB59704.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 705

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 223/511 (43%), Gaps = 55/511 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    I AD  +R     G +  +  G+D HG  +A  A+  GV 
Sbjct: 16  VTCGLPYANGDLHIGHLRGYIGADAFSRALETLGQETAYVCGSDMHGTPVAVNAEQQGVD 75

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F       + +     ++ +D++  T ++ + +  + + + + ++G IY+      Y
Sbjct: 76  PEDFALDWHEQYEETFPQFNVEFDNYGHTHDETNTELTQEIVRTLDEEGYIYEKEIQVAY 135

Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163
               + Y  D                DE  +G        +          NP ++ E  
Sbjct: 136 DPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEVEDPTSTITGNPAEYRERT 195

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             FF +S + D L        EF+  +E     RN+   +++ GL+D  ++R   DWGI 
Sbjct: 196 HKFFEVSEFADFLT-------EFLDGLEGTSNARNQPRQWIEDGLQDWCITRD-MDWGID 247

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD---LHVIGKDI 267
            P     D+ + ++YVW+DA   Y+ +T       G+      + W  D   +H+IG+DI
Sbjct: 248 YPTAEGEDESELVLYVWVDAPIEYVASTKQYSERVGTDEFDWEQVWKGDGEIMHIIGRDI 307

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           ++ H I+WPA L       P+ + + GFI   G+ +S S    I   E ++E    D LR
Sbjct: 308 IQHHTIFWPAMLEGVGYNKPRGIAATGFITINGKGLSTSRNRAIWAKEYLDEGFHPDLLR 367

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L       +D  +  D  +++VN +L   +GN   RS+    ++Y+G   TP   T+ 
Sbjct: 368 YYLTTTGGLQQDVDFSWDAFQEKVNGELVGTVGNFWYRSLLFAYRNYEG---TP--ETDV 422

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E +       + + RE++ +  +         L    + Y    +PW+L    P++A+ 
Sbjct: 423 SEEVRERIEGAIGDARESVNDYDLRGIGGAATELAQFGNEYIQRNEPWKLTDDEPEKAAQ 482

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+   V++ + + +L++   P  A  +++ L
Sbjct: 483 VIRDCVQIAKAVGVLIEPIAPDKAQNLWEQL 513


>gi|168483129|ref|ZP_02708081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043369|gb|EDT51415.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 545

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 233/505 (46%), Gaps = 41/505 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   HIGHA  ++  D+LAR++R  G +VL+ +G+D +G  I+  A+   
Sbjct: 3   IFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D   + F++  + L  +YD + RT    HH+  + L+ ++ +K  +Y      
Sbjct: 63  KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 122

Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM--------------EE 162
            Y   D  +  D  V           +G      +A  +P+  +              E 
Sbjct: 123 LYCTFDNQFLPDRFVEGKCPNCGTHLRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGIK 219
           E +++  S +Q+ L +Y     E +    R+N +     +++ GL D +++R   + GI 
Sbjct: 183 EHFYYVFSEFQNLLETYLNDAEETVR--WRKNAINLTKRYLREGLPDRAVTRDLPN-GIP 239

Query: 220 IPDDP--QYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW---PADLHVIGKDILRFHAI 273
           +P D      +YVW +A+  Y T +  +      +   FW       +V GKD + FH I
Sbjct: 240 VPIDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTI 299

Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA L    + PLP+ + S  ++  + +KIS S    I   ++I++   D++RYFL   
Sbjct: 300 IWPAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTIN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +         N++L    GN ++R++  I K ++  IPT   + E +  IL 
Sbjct: 360 APEMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPT--KYLEGE--ILY 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +   +   +++  + +AL ++   +   ++++D  KPW L++++ ++   VL   V
Sbjct: 416 NLKELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            +I  L  +L  F+P    KI D+ 
Sbjct: 476 IIILNLGQMLNPFIPFSGKKIEDMF 500


>gi|289582256|ref|YP_003480722.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531809|gb|ADD06160.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 717

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 230/512 (44%), Gaps = 57/512 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    I AD  +R     G +  + +G+D HG  +A  A+  GV+
Sbjct: 20  VTCGLPYANGDLHIGHLRGYIGADAFSRALETLGQETAYVSGSDMHGTPVAVNAEEEGVS 79

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  +    + +     ++ +D++  T ++ + +  + + + + D+G +Y+      Y
Sbjct: 80  PEEFAMEWHEQYEETFPKFNVDFDNYGHTHDETNTEFTQEIVRTLDDEGYVYEKEIQVAY 139

Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163
               + Y  D                DE  +G        +          N  ++ +  
Sbjct: 140 DPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEVEDPTSTITGNAAEYRDRT 199

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             FF +S + D L        EF+  +E     RN+   +++ GL+D  L+R   +WGI 
Sbjct: 200 HKFFEVSEFADYLT-------EFLDGLEGTSNARNQPRQWIEEGLQDWCLTRD-MEWGID 251

Query: 220 IPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD---LHVIGKDI 267
            P+         ++YVW+DA   Y+ +T    +  G+      + W  D   +HVIG+DI
Sbjct: 252 YPNGDSETTEDIVLYVWVDAPVEYIASTKQYADRVGTDEYDWERVWKDDGDIVHVIGRDI 311

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           ++ H I+WPA L  A    P+ V + GFI   G+ +S S    I   E +EE    D LR
Sbjct: 312 IQHHTIFWPAMLEGAGYNKPRAVAATGFITINGKGLSTSRNRAIWAKEYLEEGFHPDLLR 371

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L       +D  +  D  +++VN +L   +GN   RS+    ++Y+G   TP A  + 
Sbjct: 372 YYLTTTGGLQQDVDFSWDAFQEKVNGELVGTVGNFWYRSLLFAYRNYEG---TPEA--DV 426

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
            E +       + + RE + N    R + Q  + +++  + Y    +PW+L   +P++A+
Sbjct: 427 SEEVAERIKGAIGQTREAV-NDYSLRGIGQAATQLAQFGNEYIQRNEPWKLTDDDPEQAA 485

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V+   V++ + + +LL+   P  A  +++ L
Sbjct: 486 QVIRDCVQIAKAVGVLLEPIAPDKAQALWEQL 517


>gi|113868900|ref|YP_727389.1| methionyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|122946656|sp|Q0K7K0|SYM_RALEH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113527676|emb|CAJ94021.1| Methionyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 686

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 237/536 (44%), Gaps = 64/536 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+  
Sbjct: 5   RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D++  T  + + + C  ++  +  +  I +    
Sbjct: 65  GITPKALIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKAEDLIAEREVE 124

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161
            ++      +  D     E  K GA  QY ++              NP   +        
Sbjct: 125 QFFDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRK 184

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTFD 215
               YFF+LS    +  ++       +   E  N++  ++      S L D  +SR    
Sbjct: 185 SSAHYFFKLS--DPRCETFLREWVADLAQPEAANKMQEWLGAEGEASTLSDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFQNLAAKKGIDFDAWVGPHSTAEQYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     ++  +  + LRY+
Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYVDTGMNPEWLRYY 362

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D    RVN+DL     N+ SR+   ++K ++G +         D
Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKV---------D 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIH--------RALAQVISLVSEVDRYFDAQKPWELKKT 439
           E+ L+    +L+++R+    Q+ H        +AL  V+ L   V+ + D +KPWEL K 
Sbjct: 414 EAALA--HPLLEQLRQ-AAPQVAHLYEAREYSKALRLVMELTDAVNAFVDTEKPWELAKD 470

Query: 440 NPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
              RA+      V++E  R L + L+  VP +A  +   L V  E   ++++D++L
Sbjct: 471 ENKRAALHAACSVSLEAFRLLTVYLKPVVPNVAAGVERFLNV--EPLDWRAIDKQL 524


>gi|293607695|ref|ZP_06690026.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292813833|gb|EFF72983.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 702

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 247/572 (43%), Gaps = 88/572 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 19  LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 78

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRIL-------WKKISD 115
           +T +  V + +       +   I +D +  T    +    HD  R L        + I  
Sbjct: 79  ITPQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSHDIYRALREQNLIETRSIEQ 138

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P + +               
Sbjct: 139 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTELINPYSALTGATPVLKS 198

Query: 162 EEGYFFRLSAYQDKLLSYYES-------------HPEFILPIERRNEVISFVKSGLKDLS 208
            + +FF+LS    + + + +               PE +L   R        ++ L D  
Sbjct: 199 SDHFFFKLS--DPRCVEFLQQWTTGSNANGGKHLQPE-MLAKTREWLGAEDGEAKLGDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-----------YLDNPDGSKAKFWP 257
           +SR    +GI+IPD P    YVW+DA   YL +              L +P+G+  +   
Sbjct: 256 ISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPNGTTEQ--- 312

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
             +H IGKDI+ FHA++WPA L  A    P  V  HGFI   GEK+SKS G  I P+  +
Sbjct: 313 --VHFIGKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYL 370

Query: 318 EEVGVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            E+G++A  +RY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ S I K +D
Sbjct: 371 -ELGMNAEWMRYYIAAKLNARVEDVDFNPEDFIARVNSDLVGKYVNIASRAASFITKHFD 429

Query: 375 GMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           G +   G     D + LS   +   + IR   + +  +RA+ ++++    +++ FD  +P
Sbjct: 430 GALGYSG-----DTAALSAEYAEQAESIRAAFEAREYNRAIREIMAYADRINQAFDTAQP 484

Query: 434 WELKK---TNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--- 483
           W L K   T  D     L      ++   + L+++L   +P LA ++   LF A      
Sbjct: 485 WVLAKGLATADDAQKAALQDICSRSLAGFKALSVMLAPVLPSLAERVALELFGAQAPFTW 544

Query: 484 ----------RCFQSLDQRLKPGFMLHKTFDP 505
                       F+ L QR++P  ML   F+P
Sbjct: 545 ADAAVLPQRVAPFKHLMQRVEPQ-MLEDLFEP 575


>gi|21673797|ref|NP_661862.1| methionyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|25009343|sp|P59077|SYM_CHLTE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21646926|gb|AAM72204.1| methionyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 703

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 238/541 (43%), Gaps = 63/541 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G DV+   G+DEHG  I   A 
Sbjct: 6   KRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLCGHDVIHIGGSDEHGVPITITAD 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  VD+      +      IS+D + RT+   HH T R  + +I  KG   K  
Sbjct: 66  KEGISPQEVVDRYHTMNAEAFAKCGISFDYYGRTSGPVHHQTAREFFLEIEKKGIFVKKT 125

Query: 124 YSGWYSLRDEAYYNDDEVY--------KGADG---QYYNAQHNPVQWMEEEG-------- 164
              ++  +   + +D  +          GA+G   +      +P + ++ +         
Sbjct: 126 EKQFFDPKAGRFLSDRYITGTCPVCKTPGANGDQCEQCGTHLSPTELIDPKSKLSDATPE 185

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTF 214
                 ++F L  YQ +L ++ E H       + R+ V+++ ++    GL D +++R   
Sbjct: 186 LRETLHWYFPLGRYQKQLEAFVERHTG-----DWRSNVVNYSRTWLNQGLADRAITRD-L 239

Query: 215 DWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD--LHV 262
            WGI +P D +     ++YVW DA+  Y++ T       G  A+ W      P    ++ 
Sbjct: 240 AWGISLPLDSEEAKGKVLYVWFDAVLGYISFTKEWAEKQGD-AELWRRYWQDPETRIINF 298

Query: 263 IGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           IGKD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   E
Sbjct: 299 IGKDNVVFHTLMFPAILMAWNEGRSEGRYELADNVPASEFMNFEGRKFSKSRNYAVYLGE 358

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +E    D LRY +       KD  +     + R N +LA+ +GN + RS+      + G
Sbjct: 359 FLERFPADTLRYSIAMNYPENKDTDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSRFGG 418

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P        D   +   +    ++           A AQ + +    +R+    +PW+
Sbjct: 419 QVPADIDLEAWDSLGIDWLAS-FGKLEAAYDGFHFREATAQTMEIARFANRFLTESEPWK 477

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + K +P+ A   + V++ +   LA+L    VP+ AN+I+ +L          ++D+ ++P
Sbjct: 478 VIKVDPEAAGRTMAVSLNLCHTLALLFWPIVPETANRIWKMLGFEG------TIDELVEP 531

Query: 496 G 496
           G
Sbjct: 532 G 532


>gi|148994771|ref|ZP_01823842.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149013148|ref|ZP_01833965.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168488899|ref|ZP_02713098.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|182684197|ref|YP_001835944.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           CGSP14]
 gi|225858843|ref|YP_002740353.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|237650047|ref|ZP_04524299.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821801|ref|ZP_04597646.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|303256108|ref|ZP_07342128.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303263003|ref|ZP_07348936.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264851|ref|ZP_07350767.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS397]
 gi|303266930|ref|ZP_07352807.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS457]
 gi|303269096|ref|ZP_07354876.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS458]
 gi|238691163|sp|B2IQ55|SYM_STRPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782873|sp|C1C727|SYM_STRP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|31087940|gb|AAO25636.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae]
 gi|147762999|gb|EDK69943.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147927037|gb|EDK78079.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|182629531|gb|ACB90479.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           CGSP14]
 gi|183572547|gb|EDT93075.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|225721595|gb|ACO17449.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|301802052|emb|CBW34784.1| Drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           INV200]
 gi|302596955|gb|EFL64081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302635830|gb|EFL66332.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302641345|gb|EFL71712.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS458]
 gi|302643563|gb|EFL73833.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS457]
 gi|302645539|gb|EFL75770.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS397]
 gi|332073411|gb|EGI83890.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 545

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 233/505 (46%), Gaps = 41/505 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   HIGHA  ++  D+LAR++R  G +VL+ +G+D +G  I+  A+   
Sbjct: 3   IFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D   + F++  + L  +YD + RT    HH+  + L+ ++ +K  +Y      
Sbjct: 63  KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 122

Query: 127 WYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM--------------EE 162
            Y   D  +  D  V           +G      +A  +P+  +              E 
Sbjct: 123 LYCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGIK 219
           E +++  S +Q+ L +Y     E +    R+N +     +++ GL D +++R   + GI 
Sbjct: 183 EHFYYVFSEFQNLLETYLNDAEETVR--WRKNAINLTKRYLREGLPDRAVTRDLPN-GIP 239

Query: 220 IPDDP--QYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW---PADLHVIGKDILRFHAI 273
           +P D      +YVW +A+  Y T +  +      +   FW       +V GKD + FH I
Sbjct: 240 VPIDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTI 299

Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA L    + PLP+ + S  ++  + +KIS S    I   ++I++   D++RYFL   
Sbjct: 300 IWPAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTIN 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +         N++L    GN ++R++  I K ++  IPT   + E +  IL 
Sbjct: 360 APEMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPT--KYLEGE--ILY 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +   +   +++  + +AL ++   +   ++++D  KPW L++++ ++   VL   V
Sbjct: 416 NLKELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            +I  L  +L  F+P    KI D+ 
Sbjct: 476 IIILNLGQMLNPFIPFSGKKIEDMF 500


>gi|296113614|ref|YP_003627552.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921308|gb|ADG61659.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 683

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR  
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L K    
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508


>gi|326568654|gb|EGE18725.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 683

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR  
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L K    
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508


>gi|325266408|ref|ZP_08133085.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981851|gb|EGC17486.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 684

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 226/508 (44%), Gaps = 45/508 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R K+ +++A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I  
Sbjct: 1   MTQR-KILVTSALPYANGSIHLGHMVEHIQTDIWVRFQKLRGHECYYCCADDTHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T +  +++             I YD++  T    +      ++  +   G I 
Sbjct: 60  AAEKQGITPEEMIEKTHAEHLADFTGFGIGYDNYYSTHSPENKKFSEQIYLALKANGKIV 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHN 155
               +  +    + +  D  V KG      A  QY                   Y+A   
Sbjct: 120 GKTINQLFDPEKQMFLPDRFV-KGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSG 178

Query: 156 PVQWMEE-EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSR 211
               M++ E +FF+LS   D L  +   E++    L  E  N++  ++K G L D  +SR
Sbjct: 179 ATPVMKQTEHFFFKLSDCADYLKQWTAGETNGRAHLQPEALNKMNEWLKDGELSDWDISR 238

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGK 265
               +G +IPD+P    YVW+DA   Y+ +   L +  G    +F+  D      H IGK
Sbjct: 239 DAPYFGFQIPDEPDKYFYVWLDAPVGYMASFQNLCDKIGLDFNEFFGKDSTAEMYHFIGK 298

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++W A L  +    P  +F+HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 299 DILYFHALFWTAMLEYSGHRAPTGIFAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 358

Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  ++    +D   +      RVN+DL     N+ SR+   I K + G +      
Sbjct: 359 MRYYIAAKLNSKIEDIDLNLQDFIARVNSDLVGKYINIASRASGFIHKKFAGSL-----H 413

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             S  ++++  +     I  + +N+   +AL ++++L   V+ Y DA KPWEL K     
Sbjct: 414 AVSGSALIARLTEKSDSIAADYENREYAKALREIMALADIVNEYVDANKPWELAKQEGME 473

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A  +  V  E+I    IL     P L N
Sbjct: 474 AR-LHEVCSELINAFKILTAYLAPVLPN 500


>gi|326560048|gb|EGE10443.1| methionyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 683

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR  
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L K    
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508


>gi|326559611|gb|EGE10025.1| methionyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326565529|gb|EGE15700.1| methionyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567709|gb|EGE17815.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326568781|gb|EGE18851.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326575031|gb|EGE24960.1| methionyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 683

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 226/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR  
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L K    
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLAPILPKLSEQAREFL 508


>gi|288803454|ref|ZP_06408886.1| methionine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334064|gb|EFC72507.1| methionine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 687

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 234/520 (45%), Gaps = 51/520 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVAFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  +D  +   IS+D + RTT + HH      ++K+ D G + 
Sbjct: 64  RAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSETHHKFASDFFRKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ----------------HNPVQWM 160
           +     +Y      +  D     E     +   Y  Q                H+ +   
Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183

Query: 161 E-----EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
           +      + ++  L+ YQ+ L  +  E H E+      R  V    KS L D+ L  +  
Sbjct: 184 QPIIKRTKNWYLPLNDYQEWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L   D    G+  K+W       +
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEKDPEHFGNWQKWWQDPETRIV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318
           H IGKD + FH + +P  L +  +  LP  V S+ F+  + +KIS S    +   E +  
Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGDYILPDNVPSNEFLNLEDDKISTSKNWAVWLHEYLRD 356

Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            E   D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++
Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E D   +     V  ++   +       A  + ++L    ++Y    +PW+L 
Sbjct: 417 PACGELEEVDRQTIQEFKDVKAKVEAYLDIFKFREAQKEAMNLARIGNKYIAETEPWKLW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           KT+P R  T+LY +++++  L+I  + F+P  + K+ +++
Sbjct: 477 KTDPKRVETILYFSLQLVANLSIAFEPFLPFSSKKLREMI 516


>gi|149003959|ref|ZP_01828767.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758018|gb|EDK65024.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 568

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 233/506 (46%), Gaps = 41/506 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I  A  Y N   HIGHA  ++  D+LAR++R  G +VL+ +G+D +G  I+  A+  
Sbjct: 25  QFFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKE 84

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + K   D   + F++  + L  +YD + RT    HH+  + L+ ++ +K  +Y     
Sbjct: 85  NKSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIK 144

Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWM--------------E 161
             Y   D  +  D  V           +G      +A  +P+  +              E
Sbjct: 145 QLYCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRE 204

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGI 218
            E +++  S +Q+ L +Y     E +    R+N +     +++ GL D +++R   + GI
Sbjct: 205 TEHFYYVFSEFQNLLETYLNDAEETVR--WRKNAINLTKRYLREGLPDRAVTRDLPN-GI 261

Query: 219 KIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHA 272
            +P D      +YVW +A+  Y T +  +      +   FW       +V GKD + FH 
Sbjct: 262 PVPIDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHT 321

Query: 273 IYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I WPA L    + PLP+ + S  ++  + +KIS S    I   ++I++   D++RYFL  
Sbjct: 322 IIWPAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTI 381

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +         N++L    GN ++R++  I K ++  IPT   + E +  IL
Sbjct: 382 NAPEMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPT--KYLEGE--IL 437

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                +   +   +++  + +AL ++   +   ++++D  KPW L++++ ++   VL   
Sbjct: 438 YNLKELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATC 497

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           V +I  L  +L  F+P    KI D+ 
Sbjct: 498 VIIILNLGQMLNPFIPFSGKKIEDMF 523


>gi|254429828|ref|ZP_05043535.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195997|gb|EDX90956.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 684

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 226/503 (44%), Gaps = 47/503 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF +L G    +    D HG  I   A+  
Sbjct: 14  KILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGQQCTYVCADDAHGTAIMLKAEEN 73

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTE-----------KRHHDTCRILWKKI 113
           GVT +  + Q  + + RD AD   +++D++  T             +R+ D   IL K I
Sbjct: 74  GVTPEQQIAQVKADHERDFAD-FQVNFDNYYSTHSAENRALSEMVFQRNKDAGYILEKTI 132

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +   D  KG +     ++        E   G + +   A + P + ++        +  +
Sbjct: 133 TQLYDPQKGMFLADRFVKGTCPKCKSEDQYGDNCEVCGATYTPAELIDPYSSVSGATPVE 192

Query: 174 DKLLSYYESHPEFILPIER--------RNEVISFVKSGLKDLS---LSRKTFDWGIKIPD 222
            +    +   P+F  P+ R        + +V + ++  ++DL    +SR+   +G +IP 
Sbjct: 193 KETTQLFFDLPKF-EPLLREWTRSGALQEQVANKLQEWIEDLQPWDISREAPYFGFEIPG 251

Query: 223 DPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
            P    YVW+DA   Y+ +   Y D    S   +W  D      H IGKDI+ FH ++WP
Sbjct: 252 YPGKYFYVWLDAPIGYMASFQNYCDREGLSFDDYWGKDSTAELYHFIGKDIINFHGLFWP 311

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A L  A L  P  ++SHGF+   G K+SKS G  I     ++ +  + LRY+   +++  
Sbjct: 312 AMLDGAGLRKPTAIYSHGFVTVNGAKMSKSRGTFIKARTYLDHLSPEYLRYYFAAKLSSR 371

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D F  + +   +RVN+DL   + N+ SR+ + + K + G +      T+ D  +L    
Sbjct: 372 VDDFDLNLEDFAQRVNSDLVGKLVNIASRTGNFV-KKFGGTLS-----TDLDNMML---V 422

Query: 396 RVLQE----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449
           R +QE    I +  + +   +A+ ++++L    + Y   + PW L K          +  
Sbjct: 423 REVQEAGPRIADFYEKREFGKAMREIMALADHANGYIADKAPWSLAKEEGKEQEVLAICS 482

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
             + V R L I L+  +P LA +
Sbjct: 483 TAINVFRLLVIYLKPVLPALAER 505


>gi|222825097|dbj|BAH22254.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Cadra
           cautella]
          Length = 143

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/141 (52%), Positives = 99/141 (70%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T I Y N +PHIGHAY  +I DV ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFESFYITTPIYYVNDKPHIGHAYTSLICDVTARFVKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  K F D+ S  FR +A++++ + DDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKTKGIEPKEFTDEISVTFRKLAELMNFNSDDFIRTTEERHEQAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
              YSGWYS+RDEA+Y + E+
Sbjct: 121 LDSYSGWYSVRDEAFYQESEL 141


>gi|222478882|ref|YP_002565119.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451784|gb|ACM56049.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 714

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 230/515 (44%), Gaps = 57/515 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  DV  R     G +  F +G+D HG  +A  A+  GV+
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDVYRRALERLGQETAFVSGSDMHGTPVAVNAEQEGVS 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F       +       ++ +D++  T ++ +    + L + + + G +Y+      Y
Sbjct: 74  PEQFALDWHEQYAATFPKFNVEFDNYGHTHDETNTAVTQQLVRDLDEGGHLYEKEIMVAY 133

Query: 129 SLRDEAYYND----------------DEVYKGAD-----GQYYNAQH----NPVQWMEEE 163
              D+ +  D                DE  +G       G+  + +     NP ++ E  
Sbjct: 134 DPVDDQFLPDRYVEGTCPYCGAHARGDECDEGCQRHLEPGEVEDPESTITGNPAEYRERT 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-D 222
             FF +SA+ + L  + +           RN+   +++ GL+D  ++R   DWGI  P +
Sbjct: 194 HQFFEVSAFSEYLSGFLDR---LEGTSNARNQPREWIEQGLQDWCITRD-MDWGIDYPGE 249

Query: 223 DPQ-YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------------LHVIGKD 266
           +PQ  ++YVW+DA   Y+++T       G+ A  W A                +HVIG+D
Sbjct: 250 NPQDLVLYVWVDAPIEYISSTKQYTERVGADAFDWEAAWKEGASDAHPEGGEIVHVIGRD 309

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           I++ H I+WPA L + +   P+ V + GF+   G+  S S    +   E ++E    D L
Sbjct: 310 IIQHHTIFWPAMLEATDHTEPRAVMASGFVTLGGKGFSTSRDRAVWADEYLDEGFHPDPL 369

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L       +D  +  +  + RVN +L   +GN + RS+    ++YD     P A   
Sbjct: 370 RYYLATNGGFQQDVDFSWEKFRDRVNTELVGTVGNFLYRSLLFAHRNYDD---APIADAT 426

Query: 386 SDESILSVCSRVLQEIR--ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPD 442
           SDE    V  R+ + I   E   N    RA+   ++ ++   + Y    +PW+L   +P+
Sbjct: 427 SDE----VAERIEEAIADFEAAVNDYSVRAVGDAVTDLARFGNEYIQRSEPWKLVDDDPE 482

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            A+ V++  V + + +A+L +   P+   +++D L
Sbjct: 483 EAAQVIHDCVAIAKAIAVLFEPIAPEKTERLWDQL 517


>gi|186476942|ref|YP_001858412.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193401|gb|ACC71366.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 726

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 218/508 (42%), Gaps = 45/508 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 21  KARRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPIMLK 80

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  + +      ++  +   G I  
Sbjct: 81  AEQEGITPKQLIDRVWQEHKRDFDNFGISFDNYYSTDSEENRVLSESIYTALQAAGLIEA 140

Query: 122 GCYSGWYSLRDEAYYND----DEVYK-------GADGQYYNAQHNPVQWME--------- 161
                 Y    E +  D     E  K       G + +   + + P + +          
Sbjct: 141 RDIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYQPTELINPYSVVSGAT 200

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  ++    ++ L D  +SR 
Sbjct: 201 PVKKTSTHYFFRLS--DPRCENFLRGWVGGLAQQEATNKMREWLGDAGEAKLADWDISRD 258

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 259 APYFGFEIPGAPGKYFYVWLDAPVGYYASLRNLAEKRGLDFDAWTKKGATTEQYHFIGKD 318

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VIE  +  + L
Sbjct: 319 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITANSVIETGMNPEWL 378

Query: 326 RYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   ++ +  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 379 RYYFAAKLNSTMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----S 434

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPD 442
                +L+     + +I  + + +   RAL   + L   V+ Y D  KPW+  K   N  
Sbjct: 435 AMQHPLLASLRGAIAQIAAHYEARDYGRALRLTMELADSVNAYVDTAKPWDQAKDPANAV 494

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470
                  V++E  R L++ L+  +PK+A
Sbjct: 495 ALHETCSVSLEAFRLLSLALKPVLPKVA 522


>gi|312795361|ref|YP_004028283.1| methionyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167136|emb|CBW74139.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Burkholderia rhizoxinica
           HKI 454]
          Length = 728

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 225/516 (43%), Gaps = 51/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N   HIGH  E I  D+  R  R+ G +V +    D HG  I   AQ+ 
Sbjct: 36  RMLVTSALPYANGPIHIGHLVEYIQTDIWVRAMRMHGHEVYYVGADDTHGTPIMLRAQSE 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++  +  +   D   IS+D++  T    +      ++  + D G I      
Sbjct: 96  GITPRQLIERVWQEHKRDFDHFGISFDNYYSTDSDENRVLSETIFTALHDAGLIAARDIE 155

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161
             Y    E +   D   KG      A  QY        + + P + ++            
Sbjct: 156 QAYDPVKEMFL-PDRFIKGECPKCSAKDQYGDSCEVCGSTYQPTELVKPYSVLSGATPVK 214

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK----SGLKDLSLSRKTFD 215
                YFF+LS    +  ++       +   E  N++  ++     + L D  +SR    
Sbjct: 215 KTSTHYFFKLS--DPRCETFLRGWVSQLAQQEATNKLREWLGEDGDATLADWDISRDAPY 272

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL----HVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G   + W  P       H IGKDIL 
Sbjct: 273 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLNFEEWVRPGSTTEQYHFIGKDILY 332

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I+    I   G+D   LRY
Sbjct: 333 FHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGTKMSKSRGTFINANSYI-TTGLDPQWLRY 391

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +L  ++ +  +D   + D  + RVN+DL     N+ SR+   ++K +D  +      +  
Sbjct: 392 YLAAKLNSTMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLVKRFDARVQD----SAM 447

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           +  +L      +  I  + +++   RAL Q + L   V+ Y DA KPWE  K +P  A  
Sbjct: 448 NHPLLVRLRDAIPTIAAHYESREYSRALRQTMELADAVNAYVDAAKPWEQAK-DPANAVA 506

Query: 447 V---LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +     V++E  R L + L+  +PKLA  +   L +
Sbjct: 507 LHETCSVSLEAFRLLTLALKPVLPKLAESVETFLSI 542


>gi|307128536|ref|YP_003880566.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482998|gb|ADM89868.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 549

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 239/506 (47%), Gaps = 45/506 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK +++  ++ A+ Y N   HIGH   + + AD+  R+ + +G  V+F +GTDEHG  I 
Sbjct: 1   MKNKKRYTVTAALPYANGPIHIGHLSGVYLPADIFVRYLKYNGKKVIFISGTDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+TTK  VD+     +     + I +D+F RTT K H+ T    +KK+  K   
Sbjct: 61  IKAKEEGLTTKKIVDKYHILIKKSLKKIGILFDNFSRTTSKIHYKTSISFFKKLYKKKKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEEGYF-- 166
            +     +Y  +   +  D  +        YN  +           +P + ++   YF  
Sbjct: 121 IERETEQYYDNKVNQFLPDRYILGICPKCNYNIAYGDQCEKCGFSISPEELIKPYSYFTG 180

Query: 167 ------------FRLSAYQDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSR 211
                         L+ YQ+ L    ++   F     ++N   ++ S++  GLK  +++R
Sbjct: 181 VKPILKKTKHWYLPLNKYQNFLEKCIKNKKHF-----KKNVYGQIKSWLNEGLKPRAITR 235

Query: 212 KTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADLHVIG 264
              +WG  I IP++   ++YVW +A   Y+++T       G    K+W     A ++ IG
Sbjct: 236 -DLNWGIPIPIPNNLGKVLYVWFEAPIGYISSTIEWSFKKGKNWEKYWKYPNTAIINFIG 294

Query: 265 KDILRFHAIYWPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG-- 321
           KD + FH I +P  L +  N  LP  V ++ F+  + +KIS S    +   E +E+    
Sbjct: 295 KDNIIFHCIIFPIMLKIHGNYILPDNVPANEFLNIENKKISTSKKWAVWLHEYLEDFTNK 354

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L+  +   KD  +     K++ N++L + +GN V+R V +  + ++G +P P 
Sbjct: 355 EDVLRYVLISNMPETKDTNFSWKDFKQKNNSELVSILGNFVNRVVVLTKRYFNGKVPYPD 414

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             ++ D SIL    +   +I   ++      AL + ++L    ++Y   ++PW+  + N 
Sbjct: 415 KLSKKDLSILDNIKKSPLKIGFFIEKYNFKYALLKFMNLARLGNKYLTLEEPWKKFQLNK 474

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVP 467
            R  T++Y++ ++I  L  L   F+P
Sbjct: 475 KRVKTIIYISFQIIGALGYLSNPFLP 500


>gi|73540380|ref|YP_294900.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123760249|sp|Q474X7|SYM_RALEJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72117793|gb|AAZ60056.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 688

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 235/535 (43%), Gaps = 62/535 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+  
Sbjct: 5   RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  +D+     +   D   +S+D++  T  + + + C  ++  +     I +    
Sbjct: 65  GITPKQLIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAEREVE 124

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------- 161
            +Y      +  D     E  K GA  QY ++              NP   +        
Sbjct: 125 QFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRK 184

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTFD 215
               +FF+LS    +  ++       +   E  N++  ++      S L D  +SR    
Sbjct: 185 SSTHFFFKLS--DPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LRY+
Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYY 362

Query: 329 LVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++ A  +D   + D    RVN+DL     N+ SR+   ++K ++G +         D
Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKV---------D 413

Query: 388 ESILSVCSRVLQEIRENM-------QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           E+ L+    +L+++RE         + +   +AL  V+ L   V+ + D +KPWEL K  
Sbjct: 414 EAALA--HPLLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDE 471

Query: 441 PDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             R++      V++E  R L + L+  VP +A  +   L V  E   ++++D++L
Sbjct: 472 AKRSALHAACSVSLEAFRLLTVYLKPVVPTVAAGVERFLNV--EPLDWRAIDKQL 524


>gi|114570377|ref|YP_757057.1| methionyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315761|sp|Q0ANL8|SYM_MARMM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114340839|gb|ABI66119.1| methionyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 572

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 241/525 (45%), Gaps = 44/525 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF RL G DVL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFQRLRGHDVLYVCATDEHGTPAELAADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + + D+     +   +   +SYD F RT+   +    +   + + +KG I +   
Sbjct: 63  AGMDVRAYCDEQHDIQKRSGEGFSLSYDYFGRTSNAPNIRLTQHFAQVLEEKGLIAERVE 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD-- 174
              +S+ D+ +  D  V        ++ A G   +     ++  + +  + ++S  ++  
Sbjct: 123 EQVFSIDDDRFLPDRYVEGTCPHCGFERARGDQCDNCGRLLEPTDLKEPYSKISGSKNLE 182

Query: 175 ----KLLSYYESHPEFILP--IERRNEVISFVKS--------GLKDLSLSRKTFDWGIKI 220
               K L   ++  E  +   ++   E  S  KS        GL+D S++R    WG+ +
Sbjct: 183 VRETKHLHLVQTQMETKIRDWVDASTEWPSLAKSIAYKWLDEGLRDRSITRD-LKWGVPV 241

Query: 221 PDD--PQ-----YIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD--------LHVIG 264
             D  P+      + YVW DA   Y+  T  + +   G    +W  D        +  +G
Sbjct: 242 AQDGTPREGFEGKVFYVWFDAPIGYIGATVEWAEAGGGDWESWWRTDKGADDVTYVQFMG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA +L +  P     K+ +  ++   G K S S    +   + ++ +  
Sbjct: 302 KDNVAFHTVSFPATILGSEEPWKTVDKLKAFNWLTWYGGKFSTSEKRGVFMDQALDILPG 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L      G D  +  +  +  +N+DLAN +GN V+R     +  +DG +P+ G 
Sbjct: 362 DYWRWYLTANAPEGSDAAFTWEHFQGLINSDLANVLGNFVNRITKYTVSKFDGTLPSAGT 421

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E++  + +   + L  +  NM+     +A A+V ++ +  + Y    +PW   K++ D
Sbjct: 422 PGENEAWMAAELDQRLPALVANMEAMEFRKAAAEVRAIWAAGNEYLTKAEPWVKYKSDVD 481

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            A+  +   + ++    IL Q F+P+ A+KI D L V D+ R ++
Sbjct: 482 AAAVGVRTGLNLVALFGILAQPFIPEAASKILDALGVPDDRRSWE 526


>gi|162456166|ref|YP_001618533.1| methionyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|187645700|sp|A9FBU8|SYM1_SORC5 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|161166748|emb|CAN98053.1| metG2 [Sorangium cellulosum 'So ce 56']
          Length = 690

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 136/539 (25%), Positives = 229/539 (42%), Gaps = 55/539 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQ 63
           ++L +++A+ Y N   HIGH  E    D+ AR+ R+ G   +     D HG  I  +A Q
Sbjct: 2   KRLLLTSALPYANGHIHIGHLVEYTQTDIFARYWRMTGRRCISLCADDTHGTAIMIRARQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
                  V  D ++ + RD A    I +D +  T    +   C  +W  + ++G +    
Sbjct: 62  EGRSEADVIADMSAAHQRDFA-AFQIRFDHYGSTNSPANRALCEEIWASLRERGMVTTKE 120

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWMEEE----GYFF 167
            +  +  + E  +  D   KG      A  QY        + +     +E      G   
Sbjct: 121 VTQLFDPQ-EGMFLADRFVKGTCPKCAAPDQYGDSCDRCGSTYAATDLVEPRSALTGARP 179

Query: 168 RLSAYQDKLLSYYESHP--------EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGI 218
            + + Q  +++     P        E  +P E  N +   F+   L+D  +SR    +G 
Sbjct: 180 EVRSAQHLMVAIEPERPFLSTWTQGEGRMPKEIANYLAGHFLSEPLRDWDVSRPAPYFGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273
           +IPD P    YVW DA   Y+  +  + D    +   +W ++    +HVIGKDI+ FH +
Sbjct: 240 EIPDAPGNYWYVWFDAPIGYMAASKEWCDREGEAFDDWWRSEETEIVHVIGKDIVYFHTL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L SA   LP +V  HGF+   GEK+SKS G  +     ++ +    LRY+   ++
Sbjct: 300 FWPAMLKSARFSLPSRVQVHGFLTVNGEKMSKSKGTFVLASTYLKHLDPAYLRYYYASKL 359

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +   D    + + L  +VNA+L N + NL SRS   + +   G+     A    D  + +
Sbjct: 360 SSKVDDIDLNLEELVNKVNAELVNKVVNLASRSSRFVAQ--TGL----SAVYPEDGGLFA 413

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
             +     I          RA   +++L    + Y D  +PW L K    +A    V  V
Sbjct: 414 SAAEEGDAIGAAYAAFDYARATRSIVALADRANEYVDRMQPWALAKQPEKKAELQAVCTV 473

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-------------FVADENRCFQSLDQRLKPG 496
            + + RQ+ + L   +PKLA+ +  +L              V      ++ L +R++PG
Sbjct: 474 ALNLFRQIVLYLAPVLPKLADDVARLLGCPMDRWALAKTPLVGTPVAAYEHLMKRVEPG 532


>gi|262341096|ref|YP_003283951.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272433|gb|ACY40341.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 561

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 241/528 (45%), Gaps = 68/528 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK+  K  ++ A+ Y N   HIGH A     ADV  R+ R    DV+F  G+DEHG  IA
Sbjct: 1   MKKSNKYTVTAALPYANGPIHIGHLAGVYFPADVFVRYLRRKNKDVIFICGSDEHGVPIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+    T +  V++     +D      I +D++ RT+ + H++     +KK+ +K  I
Sbjct: 61  MQAKREKKTPQEIVNKYHHMIQDCFTNFGIQFDNYSRTSTEIHYEISTSFFKKLHEKEKI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--------------- 164
           ++         ++   Y D+E  +    +Y + Q    +  E  G               
Sbjct: 121 FE---------KESEQYYDEEAKQFLADRYISGQCPHCKKEEAYGDQCENCGSSLIPEDL 171

Query: 165 -------------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                              ++F L+ YQ  L  +   + +    +    +  S++  GLK
Sbjct: 172 IHPKSTISGSFPVFKKTKHWYFPLNEYQKFLEKWILINHQTDWKVNVYGQAKSWLDQGLK 231

Query: 206 DLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------FWP 257
             +++R   +WG+ +P   +   ++YVW +A   Y+++T      + SK K      +W 
Sbjct: 232 PRAITR-DLNWGVPVPILQEKGKVLYVWFEAPIGYISST-----IEWSKRKKIDWKPYWK 285

Query: 258 AD----LHVIGKDILRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
                 +  IGKD + FH I +P  L +      LP K+ ++ F+  + +KIS S    +
Sbjct: 286 DKKTKLIQFIGKDNIVFHCIIFPVILKAYDGGYILPDKILANEFLHLENKKISTSKNWAV 345

Query: 312 DPIEVIEEV--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
              E +E+     D LRY L+  +   KD  ++    +++ N +L   +GN V+RS++++
Sbjct: 346 WGHEYLEDFPNQQDTLRYILIANMPEKKDNNFNWKDFQRKNNTELVAILGNFVNRSLTLV 405

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K  +G++P PG  +  D+ IL       + I + +++     ALA  ++L    ++Y  
Sbjct: 406 KKYNNGIVPNPGILSIEDKKILKKIKNYPESIGDFIESYKFREALACFMNLAKLGNKYLT 465

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++    KK    R  T+LYV+++++  LA L + F+P  A K+ D+L
Sbjct: 466 EEE--PWKKEEKKRVETILYVSLQIVGMLAQLAEPFLPHTAKKLLDML 511


>gi|331006642|ref|ZP_08329926.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419557|gb|EGG93939.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 705

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 223/519 (42%), Gaps = 69/519 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G    +    D HG  I  KA QN
Sbjct: 9   KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHKCTYVCADDAHGTAIMLKAEQN 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                +   +  + + +D AD   + +D+F  T  + +     ++++++   G I     
Sbjct: 69  GISPEEQIANIKAEHEKDFADFF-VEFDNFHSTHSEENKALSELIYERLLANGHIASRNI 127

Query: 125 SGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM------------- 160
           +  Y    E +  D            E   G + +   A ++P   +             
Sbjct: 128 TQAYDPEKELFLADRYIKGTCPKCKTEDQYGDNCEACGATYSPTDLLNPKSAISGATPIE 187

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF+L  + + L ++  +     L  E  N++  ++ SGL++  +SR    +G +
Sbjct: 188 KESEHFFFKLPEFTEFLKNWTRAGH---LQTEMANKLAEWLDSGLQEWDISRDAPYFGFE 244

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADL------------------ 260
           IP+ P    YVW+DA   Y+ +   L    G   + +W  D                   
Sbjct: 245 IPNQPGKYFYVWLDAPIGYIASFKNLCERTGENWEDYWIDDESDDVSSDNGRLNNGTELY 304

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L SA    P  V  HGF+   G+K+SKS G  I+    +E +
Sbjct: 305 HFIGKDIVNFHALFWPAMLHSAKFRTPTAVNVHGFLTVNGQKMSKSRGTFINARSYLEHL 364

Query: 321 GVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGM 376
             + LRY+   ++  G D    + +    RVN+DL   + N+ SR+   I K        
Sbjct: 365 KPEYLRYYFAAKLTSGVDDLDLNLEDFLVRVNSDLVGKVVNIASRTAKFIQKSGGILSDT 424

Query: 377 IPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           I  P     F +++E+I       L E RE        +A+ ++++L    + Y  A+ P
Sbjct: 425 IEDPELWQTFVDANETIAK-----LYEARE------FAKAMREIMNLADAANEYIAAKAP 473

Query: 434 WELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLA 470
           W L K        +   T  + + R +   L+  +P+L+
Sbjct: 474 WALAKQEGQEQQVIDVCTLGINMFRVITTYLKPVLPELS 512


>gi|291614999|ref|YP_003525156.1| methionyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585111|gb|ADE12769.1| methionyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 743

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 227/530 (42%), Gaps = 55/530 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G    +    D HG  I   A+  
Sbjct: 4   KILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGNTCHYVCADDTHGTPIMLRAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  + +      D      + +D++  T      +    +++ +     I      
Sbjct: 64  GITPEQLIARVWLEHYDDFRAFHVEFDNYGSTNSAETKEFAEGIYRTLKGGNLIETRSIE 123

Query: 126 GWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQW--------------M 160
            +Y    + +  D     E  K GA  QY        A + P +                
Sbjct: 124 QYYDPLKQMFLPDRFIKGECPKCGAKDQYGDNCEVCGAAYAPTELKNPYSAVSGTKPELR 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTFDW 216
             + YFF+LSA+  +    + +    + P E  N++  ++ +     L D  +SR    +
Sbjct: 184 NSDHYFFKLSAHSCQQFLRHWTRSGTLQP-EASNKMQEWLGAEGDNKLTDWDISRDAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFW----PADL-HVIGKDILRF 270
           G +IPD P    YVW+DA   Y+ +   L    G S   +W     A+L H IGKDIL F
Sbjct: 243 GFQIPDAPGKYFYVWLDAPVGYMGSFKQLCKAKGLSFDDYWRKGSNAELYHFIGKDILYF 302

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFL 329
           HA++WPA L  A    P ++F+HGF+   GEK+SKS G  I     ++ V   + LRY+ 
Sbjct: 303 HALFWPAMLQHAGFRTPTRLFAHGFLTVNGEKMSKSRGTFITARSYVDHVKNTEYLRYYY 362

Query: 330 VREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---------- 378
             ++    +D     D    RVN+DL     N+ SRS   I K + G +           
Sbjct: 363 AAKLNGTMEDIDLSLDDFVARVNSDLIGKYINIASRSAGFISKRFGGKLADHVLLAKCAD 422

Query: 379 ---TPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                G   E    +++L +      +I E  + +   +A   V +L+  ++ Y DA KP
Sbjct: 423 TSGLAGKLVEDHPKQNLLQILQDASAQIAELYEARDYSKATRTVGTLLDLINAYIDATKP 482

Query: 434 WELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           WEL K  +N +    V  V ++  R + I L+  +P+LA  +   L V +
Sbjct: 483 WELAKDPSNVEWLQGVCSVALQAFRIITIYLKPVLPQLARDVESFLNVGE 532


>gi|291456978|ref|ZP_06596368.1| methionine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381389|gb|EFE88907.1| methionine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 584

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 238/520 (45%), Gaps = 74/520 (14%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTT 98
           + G DVL  +GTDEHG  I   A+  G+T +   ++ +R   +D+ D L +SYD F RTT
Sbjct: 1   MKGNDVLMVSGTDEHGTPILVEAEKEGLTAQELANRYNRVIAKDLCD-LGLSYDLFTRTT 59

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCY------SGWYSLRDEAYYNDDEVY--KGADGQYY 150
              H    + ++K+  + G IYKG        S   +L D     +  +   +GA G   
Sbjct: 60  TGNHEHVVQEMFKQCLENGYIYKGTQQVAISPSTGRTLPDRYIEGECPICHAEGARGDQC 119

Query: 151 NAQHN---------PV--------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           +A  N         PV        ++ + E YF  L A  +   ++ E+   +      R
Sbjct: 120 DACGNELDPDELINPVSKINGETPRFEQTEHYFLDLPALAEANKAWLETRKGW------R 173

Query: 194 NEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLD 246
             VI+F     K++     T   DWGI +P     D+P   +YVW DA+  YL+ +    
Sbjct: 174 TNVINFSLGLFKEVKPRAITRDIDWGIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWA 233

Query: 247 NPDGSKAKF--WPAD-----LHVIGKDILRFHAIYWPAFLLSAN--------------LP 285
              G   K+  W  D      + +GKD + FH+  WP+ +L+ N              L 
Sbjct: 234 RRQGDPEKWREWWNDPKCPAYYFMGKDNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLN 293

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP++V +  F+  +G+K S S G VI   +++    VDA+RY++        D  +    
Sbjct: 294 LPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAE 353

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
             +  N +LA+  GNLV+R  ++I K++ G IP     + T  D  +L   S     +  
Sbjct: 354 FVRHNNEELASSWGNLVNRVANLINKNF-GEIPPLDEDSMTNEDRGLLEETSAAFDVVGS 412

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++      AL++ + +V ++++Y  A +PW++K  +  R  TVL+V  + +     LL 
Sbjct: 413 SIETHHQKHALSEAMRVVGDINKYISATEPWKIKD-DQARLGTVLHVAAQAVADANHLLA 471

Query: 464 AFVPKLANKIFDILFVAD------ENRCFQSLDQRLKPGF 497
            F+P  A K+++ L  A       E +  + LD   KPGF
Sbjct: 472 PFLPHSAQKVWEALGGAGTFSPLPELKEVEDLD---KPGF 508


>gi|316974847|gb|EFV58317.1| methionyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 975

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 241/539 (44%), Gaps = 60/539 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G     ++ ADV +R+ RL G + L+  GTDE+G      A   
Sbjct: 17  ILITSALPYVNNYPHLGTIIGCVLSADVFSRYCRLRGYNTLYICGTDEYGTATETKAIEE 76

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT     D+     RD+ +  +I +D F RTT K+  +  + ++KKI D G        
Sbjct: 77  GVTPIQLCDKYYELHRDVYEWFNIKFDYFGRTTTKQQTEIAQHIFKKIYDAGFTTTKNVD 136

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQW 159
             Y  + E +  D  V        Y+ A G   +                    H P+  
Sbjct: 137 QLYCEKCERFLADRFVEGECPFCGYEEARGDQCDKCGHLINAPELKLPKCKLCSHPPIIR 196

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDW 216
             E   F  L   Q  L  Y E            N +     ++K GLK+  ++R    W
Sbjct: 197 TSEH-LFLDLPKLQLNLEKYLEEQWASSDCCWSHNAIAITKKWLKEGLKERCITRD-LKW 254

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILR 269
           G  +P +     + YVW DA   YL+ T     P+  K K+W  D HV     +GKD + 
Sbjct: 255 GTPVPLENFSNKVFYVWFDAPIGYLSITANY-TPEHWK-KWWMDDKHVELYHFVGKDNVP 312

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH+I +PA L++ N    K   + +  ++ ++  K SKS G  +      E  +  D  R
Sbjct: 313 FHSIIFPATLIATNEQYCKVKNISATEYLNYESSKFSKSRGVGVFGNNARETGIPADVWR 372

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+      +D  ++ D    +VN++L + +GN V+R++S + + + G+IP      E 
Sbjct: 373 FYLLYTRPESQDAAFNWDDFALKVNSELLSNLGNFVNRALSFVERRFHGVIP------EV 426

Query: 387 DESILSV--CSRVLQEIRENMQNQL-------IHRALAQVISLVSEVDRYFDAQKPWELK 437
           DES+L        +  + E + N +       +  ++  ++++    ++Y  +++PWEL 
Sbjct: 427 DESLLDEDRLQAFIHNVNETLNNYIDCFDNLKLRDSVKCILNISRLGNQYMQSERPWELI 486

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           K N  +A +VL +   V+  LA L+   +P+++ KI   L +     C  S    LKPG
Sbjct: 487 KQNERQAGSVLAIVANVVAILAALVHPIMPEISTKICKQLQLEKLVFC-SSFQFLLKPG 544


>gi|87306777|ref|ZP_01088924.1| methionyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290956|gb|EAQ82843.1| methionyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 673

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 209/515 (40%), Gaps = 44/515 (8%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + Y N   HIGH  E I  D+  RF RL G D  +    D HG  I  +A+   V+ + F
Sbjct: 1   MPYANGPIHIGHLVEYIQTDIWVRFQRLRGADCRYFCADDTHGTAITISAKRNEVSEEEF 60

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           + + S   +       I +D++  T  + + + C   WK + D   + +      Y    
Sbjct: 61  IAKMSAEHQTDFAGFAIEFDNYGSTNSEENRELCAQFWKSLRDADLVIEKEIEQLYDPEA 120

Query: 133 EAYYND----------DEVYKGADGQYYNAQHNPVQWMEE----EGYFFRLSAYQDKLLS 178
           + +  D              +  D       + P   ++      G    L       ++
Sbjct: 121 QQFLADRFVRGTCPKCGRTNQPGDNCECGHTYTPADLIDPVSVLSGATPELRKATHLFVA 180

Query: 179 YYESHPEFILPIERRNEVIS----------FVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
             + HP F+    +  E +           F+   L+D  +SR    +G +IPD P    
Sbjct: 181 LEKLHP-FLEKWSQSGEHLQTEVANYLKGHFLHEELRDWDISRPGPYFGFEIPDSPGNYW 239

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-----HVIGKDILRFHAIYWPAFLLSAN 283
           YVW DA   Y+ +T      +G     W  D      H IGKDI  FH ++WP  L +A 
Sbjct: 240 YVWFDAPIGYIASTWEWCKRNGESLDKWWKDPETEVHHFIGKDITYFHTLFWPGMLQTAG 299

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
             LP KV  HGF+   GEK+SKS G  +   + +E +    LRY+   ++    D    +
Sbjct: 300 FTLPTKVHIHGFLTVGGEKMSKSKGTFVKAAKYLEHLDPAYLRYYYATKLGPRLDDLDLN 359

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
                +++++DL   + N+ SR    +     G+     A    D+      ++  +EI 
Sbjct: 360 VAEFAEKIDSDLVGKVVNIASRCAKFV--QTTGL----SAAYPDDDGRFEYAAQAGEEIA 413

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAI 460
              +    +RA+  ++ L    + + +A KPWEL+K   N      V  V + + RQ+ I
Sbjct: 414 AAYEACDYNRAMRLILELADRANPFIEANKPWELRKDPANAQALQDVCTVGINLFRQIII 473

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            L   +PKLA ++  +L     N    S DQ   P
Sbjct: 474 YLSPVLPKLATEVGALL-----NDPITSWDQSQTP 503


>gi|82523741|emb|CAI78741.1| EMAP domain protein [uncultured gamma proteobacterium]
          Length = 646

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 220/477 (46%), Gaps = 45/477 (9%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ-NSRNFRDMADVLDIS 90
           D+  RF R  G   L+    D HG  I   A+  G+T +  +D     + +D A  L I 
Sbjct: 4   DIWVRFQRSRGHHCLYVCADDAHGTAIMLTAEKLGITPEQQIDTIRQEHMQDSAGFL-IG 62

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ 144
           +D+F  T  + +   C  +++ + D G I     +  +    + +  D    KG      
Sbjct: 63  FDNFHTTHSEENRFWCETVYQCLRDNGHIASRAITQAFDPEKQLFLAD-RFIKGTCPRCK 121

Query: 145 ----------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYYESHP 184
                     A G  Y+     NPV  +        E   +FF+L  ++D L ++ +S+ 
Sbjct: 122 TPDQYGDNCEACGATYSPTDLINPVSAISGATPVEKESTHFFFKLPEFEDMLRNWLDSN- 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TG 243
              +  +  N++  ++++GL++  +SR    +G +IP +P    YVW+DA   Y+ +   
Sbjct: 181 --TMQDQVANKLREWLEAGLQEWDISRDAPYFGFEIPGEPGKYFYVWLDAPIGYIASFQN 238

Query: 244 YLDNPDGSKAKFW--PADL---HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           Y D    +   +W   +D    H IGKDI+ FH ++WPA L S+ L  P  +++HGF+  
Sbjct: 239 YCDRTGHNFDDYWRLGSDCELYHFIGKDIINFHGLFWPAMLHSSGLRAPTAIYAHGFLTV 298

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANG 357
            G K+SKS G  I     ++ +  + LRY+   ++    D    + +   +RVN+D+   
Sbjct: 299 NGTKMSKSRGTFIKAGTYLKYLDAEYLRYYFAAKLNASVDDIDLNLEDFVQRVNSDVVGK 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N+ SR    + K +D  +    + T +++++++      + I    + +  ++AL ++
Sbjct: 359 VVNIASRCAGFLHKSFDNRL----SGTCAEQALVTSFIAAGEAIAGLFEEREFNKALREI 414

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           ++L    ++Y D +KPW L K   +      V  V V + R L   L+  +P +A K
Sbjct: 415 MALADRANQYIDEKKPWILAKQENSEQEVHDVCSVGVNLFRVLMTYLKPVLPAMAEK 471


>gi|33519922|ref|NP_878754.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|68565996|sp|Q7VRX4|SYM_BLOFL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33504268|emb|CAD83160.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 545

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 225/505 (44%), Gaps = 46/505 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+   +V F    D HG  I   ++
Sbjct: 3   NKKILVTCALPYANGPLHIGHMLEHIQADIWVRYQRMKNNEVYFICADDAHGTAIMLKSK 62

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              +  ++ + +    +++D  D  +ISY+++  T  + +++    ++ K+   G I   
Sbjct: 63  QLNINPEIMIAKIQQEHYQDCCD-FNISYNNYHSTHSEENYELLNSIYTKLKKSGFIKSR 121

Query: 123 CYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM----------- 160
             S  Y  ++  +  D  +             G +     A + P+  +           
Sbjct: 122 FISQLYDAQNNIFLPDRFIIGTCPKCRAHNQNGDNCDQCGAIYTPLDLINPKSAISGKSP 181

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + +  FF L  +   L ++  S    +L  E  ++V  + K GLK+  +SR    +G
Sbjct: 182 IIKKSKHLFFDLPQFTKSLYTWIHSG---VLQEETLHKVKEWFKLGLKEWDISRNEPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRF 270
            KIP+      YVW+DA   Y+ T   L   N +     FW  +      H IGKDI  F
Sbjct: 239 FKIPNTSSKYFYVWMDAPIGYMGTFKNLCKKNKNILFEDFWSINSKVELYHFIGKDITYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L S     P  +F HG +   G KISKS  N I+    +  +  D LRY+  
Sbjct: 299 HSLFWPAILESCQYRKPTGIFVHGHVTLNGSKISKSKNNFINVRTYLSHLNSDYLRYYYA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +    +VNAD+ N I NL SR+ + I +   G +    +   S+  
Sbjct: 359 TKLSSKINDIDLNFNDFMLKVNADIINKILNLASRNSNFITQYNYGYL--SNSLENSNLY 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT----NPDRAS 445
              + ++ L  I +  Q +    A+ +++ L  + ++Y D Q PW + K     N + A 
Sbjct: 417 DFFIDAQYL--IGKLFQQREFSEAMRKIMQLADKANQYIDKQAPWHIVKQHGIHNKNIAL 474

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLA 470
            +  + +++ R L I L+  +P L+
Sbjct: 475 CIFSMGIQLFRVLVIYLKPVLPILS 499


>gi|294494856|ref|YP_003541349.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665855|gb|ADE35704.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 680

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 215/502 (42%), Gaps = 40/502 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N   HIGH    I AD+  R  +  G +V F  G+D HG  I   A+   
Sbjct: 10  ILVTCGLPYANGMAHIGHLRTYIPADIFVRSLKKMGHEVTFVCGSDTHGTPIVFNAEEQN 69

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +  + +   +F +    + I +D F  T +  +H+    +  ++ +   +Y      
Sbjct: 70  TTPQALIKKYHSHFDETFKSMGIEFDAFGTTDDPTNHNRTHDIVNRLIENDYVYPKTIEI 129

Query: 127 WYSLRDEAYYND----------------DEVYKGADGQYYNAQ-HNPV--------QWME 161
            Y      +  D                DE  +G        +  NPV        ++ E
Sbjct: 130 AYCAGCNRFLPDRYVEGECPHCAESARGDECDQGCGKHLEPGELKNPVCTICGGVAEYKE 189

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E +FF+LS + D LL Y +           RN  + +VK GL D  ++R   +WG+K P
Sbjct: 190 QEHFFFKLSQFNDYLLEYLD---RLDGTSNARNYALGWVKQGLDDWCITR-NLEWGVKFP 245

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKAKFWPAD---LHVIGKDILRFHAIYWPA 277
                ++YVW+DA   Y+  T    N  G S  K+W  D   +H IG DI+  H I+ PA
Sbjct: 246 GRDDLVVYVWVDAPIGYIAFTEEWANATGDSWEKYWKDDGEIVHFIGGDIIYHHCIFLPA 305

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
            L  A       V + G +  + +  SKS G V+   +   + G   D LRY+L    + 
Sbjct: 306 MLKGAGYSPASSVVASGMVKIENKTFSKSRGYVVWVGDDYMQQGFHQDLLRYYLASYTSH 365

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  +     +++ N +L    GN + R++    K++   IP      + D+ ++    
Sbjct: 366 TKELNFSWKVFQEKTNTELVGVFGNFLYRTLLFAYKNFKA-IPE----GKLDDEVMETIQ 420

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + E  E M+     +    V++L S  + YF +++PW L K + +    VL   +++ 
Sbjct: 421 NTIDEASEAMEKYEFKKYADSVMTLASYGNIYFQSREPWNLIKEDKEECGRVLKNCMQIG 480

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           + L +L +  +P+ A   +  L
Sbjct: 481 KALTLLYEPLIPEKAGNAWKQL 502


>gi|147918827|ref|YP_687447.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121690214|sp|Q0W0H2|SYM_UNCMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110622843|emb|CAJ38121.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 683

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 222/523 (42%), Gaps = 48/523 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N   HIGH    I AD+  R  R+ G + +F  G+D HG  I   A+   
Sbjct: 16  VLVTCGLPYANGSAHIGHLRTYIPADMFVRTLRMMGQETVFVCGSDAHGTPIIVNAEEQK 75

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---- 122
           ++ +  VD+    F  +     + +D +  T +  +H   + +  ++   G +Y      
Sbjct: 76  ISPRQLVDKYHVQFDSIFKKCGVIFDRYGNTDDPTNHARTKSIVSELQKNGYVYPKEIKV 135

Query: 123 --CYSGWYSLRD----------EAYYNDDEVYKGAD-----GQYYNAQ----HNPVQWME 161
             C      L D           +    DE   G       G+  + +     +  +   
Sbjct: 136 AYCPQCQRGLPDRYVEGVCPYCSSIARGDECDIGCQRHLEPGEILDPKCKVCGSKAEVRT 195

Query: 162 EEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +E +FF+LS + D L  Y  +    P  +      N  + + K  LKD  ++R   +WG+
Sbjct: 196 QEHFFFKLSEFGDFLQEYLNTLHATPNAV------NYAMEWAKE-LKDWCITR-NLEWGV 247

Query: 219 KIPDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIY 274
           K P     ++YVW+DA   Y+  T  Y      +    W  D   +H IG DI+  H I+
Sbjct: 248 KYPGHEDLVVYVWVDAPIGYIAFTEEYAKAAGKNWEDLWKGDSRIIHFIGGDIIYHHCIF 307

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI--DPIEVIEEVGVDALRYFLVRE 332
           WPA L  A   LP  V + G I    +K SKS G ++  +   +      D LRY+++  
Sbjct: 308 WPAMLKGAGYTLPWGVVASGMIKVNDKKFSKSRGYIVWVEDDYLAHGFHPDLLRYYILSY 367

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +  KD  +     + ++N +L    GN V+R ++ I  D  G I   G     D  I S
Sbjct: 368 TSHTKDINFSWTEFQTKINKELVGSYGNFVNRVLTFI--DSKG-IDVKGTI---DPKISS 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
                +  ++  + N    +    +I+L    + YF + +PW+L K NP     VL+  +
Sbjct: 422 AIKTAIDMVKTEIGNYEFKKICDSIITLSDVGNTYFQSHEPWKLIKENPAACENVLFNCI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           ++++ LAIL +  VP+ A +I+ +L           +D  L P
Sbjct: 482 QIVKALAILSEPTVPEKAKEIWGMLGYDPATLASARIDDALVP 524


>gi|299142102|ref|ZP_07035236.1| methionine--tRNA ligase [Prevotella oris C735]
 gi|298576564|gb|EFI48436.1| methionine--tRNA ligase [Prevotella oris C735]
          Length = 687

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 240/516 (46%), Gaps = 51/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITL 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+     +   +   IS+D + RTT K H       +KK+ D+G + 
Sbjct: 64  RAKKEGITPQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKTHSKLASDFFKKLYDEGKLI 123

Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y            +  E  +  ++   G   +   +  +P++ +         
Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  + H E+      R  V    KS L D+ L  +  
Sbjct: 184 KPVIRKTKNWYLPLNDYQGWLKKWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L  + P+  GS  K+W       +
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGSWEKWWKDPDTRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +  +  LP  V ++ F+  + +KIS S    +   E ++E
Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLQE 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++
Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D + L+    V +++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 417 PACGELQDVDRAALNEFKDVKEKVEAYLDVFKFREAQKEAMNLARIGNKYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+P R  T+LY++++++  LAI  + F+P  + K+
Sbjct: 477 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512


>gi|319409554|emb|CBY89844.1| methionyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 717

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 52/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 36  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQKQ 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + +            +I YD++  T    +    + +++ +   G I      
Sbjct: 96  GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 155

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
             +    + +  D  V             G + +     ++P + +              
Sbjct: 156 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 215

Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210
           E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +S
Sbjct: 216 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 273

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H IG
Sbjct: 274 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIG 333

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  +
Sbjct: 334 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 393

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +     
Sbjct: 394 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV-- 451

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
              SD ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K    
Sbjct: 452 ---SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQ 508

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            +R   V    +     L   L   +P+ A 
Sbjct: 509 DERLHEVCSELINAFTMLTAYLAPVLPQTAT 539


>gi|163753508|ref|ZP_02160632.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Kordia
           algicida OT-1]
 gi|161327240|gb|EDP98565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Kordia
           algicida OT-1]
          Length = 739

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 238/511 (46%), Gaps = 45/511 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV F  G+DEHG  I   A+
Sbjct: 63  QRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLIGKDVAFMCGSDEHGVAIPMRAK 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +  +D+     +   +   IS+D++ RT+ + HH T    +KK+ + G+  +  
Sbjct: 123 KEGVSPQDIIDKYHGIIKQSFEDFGISFDNYSRTSAEIHHKTASDFFKKLYEDGEFIEEV 182

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWM------ 160
               Y    + +  D  V        Y+ A G Q  N           NP   +      
Sbjct: 183 TEQLYDAEADQFLADRFVVGTCPKCNYEEAYGDQCENCGSSLSGTELINPKSAITGNVPT 242

Query: 161 --EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             + + +F  L  Y D L  +  E H +   P     +V S+V  GL+  +++R   DWG
Sbjct: 243 LKQTKHWFLPLDKYSDFLNEWIVEGHKKDWKP-NVYGQVKSWVDDGLRPRAVTRD-LDWG 300

Query: 218 IKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           I +P +     ++YVW DA   Y++ T      +G   + +  D     +H IGKD + F
Sbjct: 301 IPVPVEGAEGKVLYVWFDAPIGYISATKEWAEREGKDWEPYWKDSTTKLVHFIGKDNIVF 360

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +P+ L +  +  LP  V ++ F+  +G K+S S    +   E +E+     D LRY
Sbjct: 361 HCIIFPSMLKAHGDYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEDFPGKEDVLRY 420

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES 386
            L       KD  +     + R N++L   +GN ++R + +  K YDG++P   G + E 
Sbjct: 421 ALTANAPETKDNDFTWKDFQTRNNSELVAILGNFINRVIVLTHKYYDGIVPEYTGEYEE- 479

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
               L+        I  +++      A  ++++L    +++  A +PW+  K +P+    
Sbjct: 480 ----LTQIQHFPNVIASSIERYRFREASQELMNLARLGNQFLQANEPWKKIKEDPETVKG 535

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++YV +++   +A+L + F+P  A K+ ++L
Sbjct: 536 IMYVALQIAAAIAVLSEPFLPFTAKKLKNML 566


>gi|325203164|gb|ADY98617.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 685

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 222/517 (42%), Gaps = 52/517 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + +             I YD++  T    +    + +++ +   G I      
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 123

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
             +    + +  D  V             G + +     ++P + +              
Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHTRDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183

Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210
           E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +S
Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H IG
Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  +
Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +     
Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV-- 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
              +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K    
Sbjct: 420 ---ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQ 476

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +R   V    +     L   L   +PK+A      L
Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513


>gi|171186224|ref|YP_001795143.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558527|sp|B1YAZ7|SYM_THENV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|170935436|gb|ACB40697.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 565

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 229/510 (44%), Gaps = 42/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ RL G DV+F +G+D HG  I   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +      ++    DIS+D +  T    H    +  + KI + G I+    
Sbjct: 63  LGVDPADYAAKMHNIVAELFKRWDISFDLYTHTHSDVHIKFVQDFFLKIYNNGYIFTREE 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159
              Y  RD  Y  D  +        Y+ A G Q  N     +P Q              W
Sbjct: 123 EVPYCPRDRIYLPDRFIIGRCPYCGYERARGDQCENCGRLLDPKQLVEPRCAICGSKPEW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                ++  L   +D++  Y E +P   LP   +   +  +K GLK  +++R    WGI 
Sbjct: 183 RLTRHWYLDLRRLEDRIRRYVEENPH--LPPNAKEMSLGMLKEGLKPRAITRDN-RWGIP 239

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273
              P      +YVW +A+  Y++    L   +G + ++W +     +  +GKD + FH I
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVAELKGEEGLR-RYWKSPDTKIVFFVGKDNIPFHVI 298

Query: 274 YWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALRYFL 329
             PA LL+      LP    S  ++L++G+K SKS   G  ID  E ++ +  D  R+ L
Sbjct: 299 ILPALLLANGDGYALPTTTASTEYLLYEGDKFSKSRRWGIWID--EALQLMPPDYWRFVL 356

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           V      +D  +      + +N  L + +GN V+R +++I     G +P PG   + DE 
Sbjct: 357 VYMRPENRDTNFTWQAALEVINKVLNDDVGNYVNRVLTLIKNRMGGAVPPPGTPAKEDED 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            ++  + + ++   +     +  AL  V+ +  E +RY +A+ PW+L + + + A+ V+Y
Sbjct: 417 FVAKATDLFKKAERHYDAIELKDALHAVVEIAREGNRYLNARAPWDLLRRDRESANAVMY 476

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                ++ LA  L    P+ A +++ +L V
Sbjct: 477 RAYWSLKMLAAGLTPVTPRSAEELWRMLGV 506


>gi|257092590|ref|YP_003166231.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045114|gb|ACV34302.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 701

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 233/520 (44%), Gaps = 55/520 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+  
Sbjct: 4   KILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMRGHECWYVCADDTHGTPIMLRAEAE 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  +++    + RD +    I +D++  T           ++ ++   G I     
Sbjct: 64  GITPETLIERVQGEHARDFSG-FHIGFDNYYTTHSDETRRCANEIYARLQAAGLIETRVI 122

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY----------YNAQ--HNPV--------QW 159
             +Y    + +  D     E  K GA  QY          Y A    NP         + 
Sbjct: 123 EQYYDPLKQMFLPDRFIKGECPKCGAHDQYGDNCESCGAAYTANDLKNPYSAVSGARPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKTFD 215
            + E YFF+LS  + +      +  E  L  E  N++  ++    ++ L D  +SR    
Sbjct: 183 RQSEHYFFKLSDPRCQTFLRRWTQAEGRLQSEAANKLQEWLGAEGENHLTDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-PADL----HVIGKDILR 269
           +G +IP  P    YVW+DA   Y+     L +  G    ++W P       H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYMGAFRNLCDRQGLDFDEYWRPGSATELYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327
           FHA++WPA L  A    P KVF+HGF+   G K+SKS G  I     + + G+D   LRY
Sbjct: 303 FHALFWPAELEHAGYRTPSKVFAHGFLTVDGAKMSKSRGTFITAESYLAQ-GLDPEWLRY 361

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   + D    RVN+D+     N+ SRS   ++K + G + T       
Sbjct: 362 YYAAKLSSSMEDIDLNLDDFIARVNSDMVGKFVNIASRSAGFVVKHFAGQLCT------C 415

Query: 387 DESILSVCS----RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
           DES+ ++ +    R L  I ++ + +   +A+ ++++L    ++Y D+ KPWEL +    
Sbjct: 416 DESLPAIQAIRDRRAL--IADHYEARDFGKAIREIMALTDLANQYVDSVKPWELARQAGR 473

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                      + + R  AILL+  +P L+ +    L VA
Sbjct: 474 ESELQAACSNALNLFRLFAILLKPVLPALSARAEAFLNVA 513


>gi|149912132|ref|ZP_01900718.1| methionyl-tRNA synthetase [Moritella sp. PE36]
 gi|149804780|gb|EDM64822.1| methionyl-tRNA synthetase [Moritella sp. PE36]
          Length = 458

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 42/461 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I  
Sbjct: 6   MTSERKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKQRGNTCTYVCADDAHGTPIML 65

Query: 61  AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ  G+T +  + Q    +  D AD  ++ +D++  T    + +   +++ ++ D G I
Sbjct: 66  KAQERGITPEAMIAQTKIEHMADFAD-FNVDFDNYHSTHSDENRELATMIYTRLRDNGHI 124

Query: 120 YKGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM-------- 160
                S  +    E +  D            E   G +     A ++P   +        
Sbjct: 125 KTRVISQLFDPEKEMFLPDRFVKGICPECKSEDQNGDNCDACGATYSPTDLISPRSVVSG 184

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E YFF L A+ D L ++  S     L  E  N++  + ++GLK   +SR   
Sbjct: 185 AEPVLKDSEHYFFDLPAFSDMLQTWTRSGA---LQDEIANKLAEWFETGLKQWDISRDAP 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDI 267
            +G +IPD P    YVW+DA   Y+ +   L +   D    +++  D      H IGKDI
Sbjct: 242 YFGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDRRDDLDFDEYFKKDSTTELYHFIGKDI 301

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L       P  VF+HGF+   G+K+SKS G  I     ++ +  + LRY
Sbjct: 302 VNFHSLFWPAMLEGTGFRKPTGVFAHGFVTVNGKKMSKSRGTFIMARTYLDNLNPEYLRY 361

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++    D   + +   +RVN+D+   + NL SR+   I K +D  +    A   S
Sbjct: 362 YYAAKLSSKIVDLDLNLEDFAQRVNSDVVGKVVNLASRTAGFIYKRFDAKL----ASEIS 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + ++L+        I +  + +   +A+ ++++L  + + Y
Sbjct: 418 EPALLAEFVAAGDTIAQYYETREFSKAIKEIMALADKANAY 458


>gi|281424592|ref|ZP_06255505.1| methionine--tRNA ligase [Prevotella oris F0302]
 gi|281401263|gb|EFB32094.1| methionine--tRNA ligase [Prevotella oris F0302]
          Length = 687

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 241/516 (46%), Gaps = 51/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITL 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+     +   +   IS+D + RTT K H       +KK+ D+G + 
Sbjct: 64  RAKKEGITPQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKIHSKLASDFFKKLYDEGKLI 123

Query: 121 KGCYSGWYS-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y            +  E  +  ++   G   +   +  +P++ +         
Sbjct: 124 EKESEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  + H E+      R  V    KS L D+ L  +  
Sbjct: 184 KPVVRKTKNWYLPLNDYQGWLKKWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L  + P+  GS  K+W       +
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGSWEKWWKDPDTRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L + ++  LP  V ++ F+  + +KIS S    +   E ++E
Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHSDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLQE 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++
Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D + L+    V +++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 417 PACGELQDVDRAALNEFKDVKEKVEAYLDVFKFREAQKEAMNLARIGNKYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+P R  T+LY++++++  LAI  + F+P  + K+
Sbjct: 477 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512


>gi|167626594|ref|YP_001677094.1| methionyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596595|gb|ABZ86593.1| Methionine--tRNA ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 673

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 224/501 (44%), Gaps = 44/501 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I +D+  RF +L G + +F  G+D HG  I   A++ 
Sbjct: 3   KILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNECIFVCGSDTHGTPIMLKAKSL 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  V++ S N +      +I +D++  T    + +    ++ K++ +  I K   +
Sbjct: 63  GIAPEELVEKYSNNHQKDFLSFEIEFDNYHSTHSLINKEIVEDIYGKLNAQKLISKKEIA 122

Query: 126 GWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------------ 161
             Y    + +  D  V KG      A+ QY        A ++P + +             
Sbjct: 123 QAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPKSVVSGKAPIQ 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L + +  +  + ES+   +L  E  N++  + + GL+   +SR    +G  
Sbjct: 182 KNSEHFFFDLPSLEKNIKDWIESNK--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFA 239

Query: 220 IP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
           IP  D Q   YVW+DA   Y+ +   Y D  +    +FW  +       H IGKDI+ FH
Sbjct: 240 IPGTDEQKFFYVWLDAPMGYIASFRDYCDKNNVDFNEFWGDNSCESELYHFIGKDIIYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L S     P  VF++GF+   G+K++KS G  I     ++ +    LRY+   
Sbjct: 300 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMAKSRGTFIQARTYLDNLEPSYLRYYFAS 359

Query: 332 EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    D    + +    + N+D+   + N+ SR    I K +D  +    A    D+ +
Sbjct: 360 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----ANEVLDKEL 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
               ++  + I E  + +    A+  +++L  + +++ D  KPW+L K      +   V 
Sbjct: 416 EKEFAKSHRAITEAFEKREFAHAVRLIMTLADKANQFIDHHKPWQLAKEEGQEQKVHQVC 475

Query: 449 YVTVEVIRQLAILLQAFVPKL 469
              + + + L   L+  VP +
Sbjct: 476 SQGINMFKVLVAYLKPIVPSI 496


>gi|289824250|ref|ZP_06543845.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 637

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 213/471 (45%), Gaps = 45/471 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G +V F    D HG  I   AQ  G+T +  + + S+  +      +ISYD++  T  
Sbjct: 1   MRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA------------DG 147
             + +   +++ ++ + G I     S  Y   ++  +  D   KG             + 
Sbjct: 61  DENRELSELIYTRLKENGFIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNC 119

Query: 148 QYYNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           +   A ++P + +E               E +FF L ++ + L ++  S     L  +  
Sbjct: 120 EVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVA 176

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           N++  + +SGL+   +SR    +G +IP+ P    YVW+DA   Y+ +   L +  G   
Sbjct: 177 NKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTT 236

Query: 254 KF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            F   W  D      H IGKDI+ FH+++WPA L  ++   P  +F HG++   G K+SK
Sbjct: 237 SFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSK 296

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSR 364
           S G  I     ++    D+LRY+   +++   D    + +   +RVNAD+ N + NL SR
Sbjct: 297 SRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   I K +DG++    A   +D  +    +     I E  +++   +A+ ++++L    
Sbjct: 357 NAGFINKRFDGVL----AAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVA 412

Query: 425 DRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +RY D Q PW + K     A    +  + + + R L   L+  +P L+ ++
Sbjct: 413 NRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERV 463


>gi|256426015|ref|YP_003126668.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040923|gb|ACU64467.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 693

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 236/529 (44%), Gaps = 54/529 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I+ A+ Y N   HIGH A   I AD+  R+ R    DV F  GTDEHG  I 
Sbjct: 1   MAKFNRYLITAALPYANGPVHIGHLAGCYIPADIYVRYLRAKKADVKFIGGTDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    VT +  VD+  +   D    + IS+D F RTT++ HH+T    +K + DKG  
Sbjct: 61  IKAMKENVTPQDIVDKYHKIIYDSFTDMGISFDIFSRTTKQVHHETAADFFKTMYDKGLF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------NPVQWMEEEGYFFR 168
            +     ++      +  D  +     K  +   Y  Q        +P + +E       
Sbjct: 121 EEKESEQFFDETANVFLADRYIVGTCPKCGNPNAYGDQCERCGTSLSPDELIEPRSTLSN 180

Query: 169 LSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               + K   +Y               E H E+   +    +  S++  GL+  +++R +
Sbjct: 181 AVPVKKKTKHWYMPLQNYEPFLKEWLLEGHKEWKNNV--YGQCKSWIDGGLQSRAMTRDS 238

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
             WGI++P  D    ++YVW DA   Y++ T  L     + A +W  D    +H IGKD 
Sbjct: 239 -SWGIQVPLPDAEGKVLYVWFDAPIGYISATKELT---ANWADYWCKDDTKLVHFIGKDN 294

Query: 268 LRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDA 324
           + FH + +PA L       LP+ V ++ F+  + EK+S S    +   + +++     D 
Sbjct: 295 IVFHCVIFPAMLKGHGGYVLPENVPANEFLNIESEKVSTSRNWAVWVHDYVKDFPDQQDV 354

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           LRY L       KD  +     ++R N++L +   N V R++ ++ K  +G +P   A  
Sbjct: 355 LRYVLTSIAPETKDSDFTWKDFQQRNNSELTDIFSNFVHRTMVLMHKLCNGKVPAFHADL 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---- 438
             E D+++ +  +   Q I ++++N     ALA+VI +    ++Y   ++PW+L      
Sbjct: 415 KDEKDDALFAALTASKQRIEDSLENFRFREALAEVIDISRSGNKYLQEREPWKLASAMAK 474

Query: 439 ------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  N  +    L++ +++   LAIL+  F+P  A KI  +L V D
Sbjct: 475 DPSLAAANQKQIDNCLHLCLQLTANLAILVNPFLPFTAKKICHMLKVVD 523


>gi|261391580|emb|CAX49018.1| methionyl-tRNA synthetase (methionine--tRNA ligase; MetRS)
           [Neisseria meningitidis 8013]
 gi|325131203|gb|EGC53918.1| methionyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325135409|gb|EGC58030.1| methionyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325201222|gb|ADY96676.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207084|gb|ADZ02536.1| methionyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 685

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 52/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + +            +I YD++  T    +    + +++ +   G I      
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 123

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
             +    + +  D  V             G + +     ++P + +              
Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183

Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210
           E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +S
Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H IG
Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  +
Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +     
Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV-- 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
              SD ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K    
Sbjct: 420 ---SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQ 476

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            +R   V    +     L   L   +P+ A 
Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTAT 507


>gi|308388254|gb|ADO30574.1| methionyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 685

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 218/510 (42%), Gaps = 52/510 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + +            +I YD++  T    +    + +++ +   G I      
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVIE 123

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
             +    + +  D  V             G + +     ++P + +              
Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAHDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183

Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210
           E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +S
Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H IG
Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  +
Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +     
Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV-- 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
              +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K    
Sbjct: 420 ---ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQ 476

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            +R   V    +     L   L   +P+ A
Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|309379858|emb|CBX21634.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 684

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 222/509 (43%), Gaps = 55/509 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKAGGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL------DNPDGSKAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L      D  +  KA       H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAGSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                SD ++L+  +   + I E  +N+   +AL  +++L   V+ Y DA KPWEL K  
Sbjct: 420 -----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANKPWELAKQE 474

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
             +   +  V  E+I    IL     P L
Sbjct: 475 -GQDERLHEVCSELINAFTILTAYLAPVL 502


>gi|260769036|ref|ZP_05877970.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617066|gb|EEX42251.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 658

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 214/484 (44%), Gaps = 48/484 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +     
Sbjct: 3   EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMTPEEMIAAVSEEHQKDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144
            DIS+D++  T  + + +    ++ ++   G I     S  +    E +  D  V KG  
Sbjct: 63  FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121

Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180
                         A G+ Y+     NP   +        + E +FF L  ++  L  + 
Sbjct: 122 PKCKSENQYGDNCDACGETYSPTELINPKSAVSGATPIMKDSEHFFFDLPQFESMLKEWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+ 
Sbjct: 182 RSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYVWLDAPVGYMA 238

Query: 241 TTGYLDN-PDGSK-AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   L N  DG    ++W  D      H IGKDI+ FH+++WPA L  +    P  VF H
Sbjct: 239 SFKNLCNKTDGLDFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVH 298

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352
           G++   G K+SKS G  +     +  +  + LRY+   ++    D    + +   +RVNA
Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNA 358

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410
           D+ N I NL SR+   I K +DG +    A  E     ++   R+  L E RE       
Sbjct: 359 DVVNKIVNLASRNAGFITKRFDGKLSDSFAEPELYNEFVAAADRIAELYEARE------F 412

Query: 411 HRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPK 468
            RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L   L+  +P 
Sbjct: 413 GRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLLTYLKPVMPG 472

Query: 469 LANK 472
           LA +
Sbjct: 473 LAAR 476


>gi|229525645|ref|ZP_04415050.1| methionyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339226|gb|EEO04243.1| methionyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 658

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 215/483 (44%), Gaps = 46/483 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S    RD A 
Sbjct: 3   EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144
             DIS+D++  T    + +    ++ ++   G I     S  +    E +  D  V KG 
Sbjct: 63  -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120

Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179
                          A G+ Y+     NP   +        + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   ++    D    + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           ADL N I NL SR+   I K +DG +     F E D  + +  +     I E  + +   
Sbjct: 358 ADLVNKIVNLASRNAGFITKRFDGKL--SAHFAEPD--LYAEFAGAADRIAELFEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L I L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGLNLFRVLMIYLKPVMPAL 473

Query: 470 ANK 472
           A +
Sbjct: 474 AER 476


>gi|317504517|ref|ZP_07962493.1| methionine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664378|gb|EFV04069.1| methionine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 687

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 234/516 (45%), Gaps = 51/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPITL 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  ++      IS+D + RTT K H       +KK+ D G + 
Sbjct: 64  RAKKEGITPQDVCDRYHKLIKESFKEFGISFDVYSRTTSKTHSLMASDFFKKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND-----------DEVYKGADGQYYNAQHNPVQWM--------- 160
           +     +Y    + +  D           ++   G   +   +  +P++ +         
Sbjct: 124 EKESEQYYDEEAKQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  + H E+      R  V    KS L D+ L  +  
Sbjct: 184 KPVIRKTKNWYLPLNEYQTWLKKWILDEHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD----L 260
               DWGI +P       ++YVW DA   Y++ T  L     N  GS  K+W       +
Sbjct: 237 TRDLDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDKEPNKFGSWEKWWKEPDTRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +     LP  V ++ F+  + +KIS S    +   E ++E
Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLKE 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++
Sbjct: 357 LPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D + L     V  ++   +       A  + ++L    ++Y    +PW++ 
Sbjct: 417 PACGELQDVDRATLEEFEGVKDKLEAYLDAFKFREAQKEAMNLARIGNKYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+P R  T+LY++++++  LAI  + F+P  + K+
Sbjct: 477 KTDPKRVETILYISLQLVANLAIAFEPFLPFSSEKL 512


>gi|296121388|ref|YP_003629166.1| methionyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013728|gb|ADG66967.1| methionyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 696

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 233/560 (41%), Gaps = 99/560 (17%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           ++ +++A+ Y N   HIGH  E +  D+  RF +L G   ++    D HG  I  +A Q 
Sbjct: 4   QILVTSALPYANGHIHIGHLVEYLQTDIWVRFQKLVGNRCVYVCADDTHGTAIMIRARQE 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                +V  +    + +D      I +D++  T    +   C  +W+ +     I +   
Sbjct: 64  GRSELEVIGEMRESHLKDFTG-FGIEFDNYGSTHSDENRALCAEIWQSLRQADLIVERNV 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPV---------- 157
             +Y   +E +  D  +       GA+ QY          Y+A    NP+          
Sbjct: 123 ERFYDPVEETFLADRFIKGTCPKCGAEDQYGDNCDKCGSTYDATEVINPISTLSGATPVR 182

Query: 158 ------------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
                             +W +  G+       Q+++ +Y + H               F
Sbjct: 183 RESLQLFVELEKLHGWLNEWTQTGGHL------QEEIANYLQGH---------------F 221

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPA 258
           +   L+D  +SR    +G +IPD P    YVW DA   Y+ +T      +G K + +W +
Sbjct: 222 LNDPLRDWDVSRPARYFGFEIPDSPGNYWYVWFDAPIGYIASTHQWCKANGEKLEDWWKS 281

Query: 259 DL----HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           D     H IGKDI  FH ++WPA L +A L LPKKV  HGF+   GEK+SKS G  +   
Sbjct: 282 DRTEIHHFIGKDITYFHTLFWPAMLKTAGLNLPKKVHIHGFLRVNGEKMSKSKGTFVMAS 341

Query: 315 EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++ +    LRY+   +++   +D   + D    R+N+DL   + NL SR+        
Sbjct: 342 TYLKHLDPAYLRYYYASKLSSRVEDLDLNLDEFVARINSDLVGKVVNLASRTARFAQ--- 398

Query: 374 DGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               PT   A    D  + +  +    +I E  +     +A+  ++ L  + ++Y +   
Sbjct: 399 ----PTGLSAQYPDDGGLFAEAAAEAGKIAELYEACEYAQAMRAIMVLAEKANKYVEDNA 454

Query: 433 PWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------ 477
           PW LKK +P +A     V  V + + RQLA+ L   +P+LA +   +L            
Sbjct: 455 PWTLKK-DPAQAGKLQDVCTVALNLFRQLAVYLAPVLPQLAEQTGRLLNAPMKSWDEAQT 513

Query: 478 -FVADENRCFQSLDQRLKPG 496
             VA     F+ L +R+ P 
Sbjct: 514 PLVASPVNLFEHLMKRVDPA 533


>gi|86157740|ref|YP_464525.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774251|gb|ABC81088.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 694

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 222/517 (42%), Gaps = 61/517 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   H+GH  E +  DV  RF R  G DV +    D HG  I   A  
Sbjct: 3   QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDDVAYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FV++             + +  +  T    +      ++  +  KG +YK   
Sbjct: 63  VGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLVYKKSV 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
              Y   D  +  D  V           Q+  V   E  G  +     +D   +   S P
Sbjct: 123 EQLYCETDRRFLPDRFVKGTCPKCGTPDQYGDV--CEHCGTTYDPRELKDPYCAICRSAP 180

Query: 185 ---------------------------EFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
                                      E  L    R +V  ++ + L+D  ++R    F 
Sbjct: 181 VVRASDHAYVNLRKPDVNAVIHEWVNAEGHLEPAVREQVKGWL-ADLQDWCITRDAPYFG 239

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSK---AKF--------WPADL- 260
           + +  P+ P   +YVW+DA   YL++  +    + P+G++   A+F         PA L 
Sbjct: 240 FPVTDPEFPGKFLYVWVDAPIGYLSSAEHFFAAEAPEGARLAPAEFERRYLAVDSPARLE 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDILRFHA++WPA L +A L  P ++  HG +   GEK+SKS G  +     ++  
Sbjct: 300 HFIGKDILRFHAVFWPAMLWAAGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLDS- 358

Query: 321 GVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G+D   LRYF    +  G  D     D  + R+NADLAN + NL SR  +++ +      
Sbjct: 359 GLDPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASRVAALLQR------ 412

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWEL 436
             PG  T + +  ++  +R   +        L +R + +++S  + V +R     KPWE 
Sbjct: 413 -LPGGVTAALDPEIAAATREAVKGARGAYQALEYRDVVRLVSQAASVCNRRVQETKPWED 471

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                +R  +VLY T + +  LA +L   +P+ + ++
Sbjct: 472 PAGEAER--SVLYTTGKALLGLARVLAPILPQFSARL 506


>gi|254805891|ref|YP_003084112.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669433|emb|CBA08678.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 717

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 222/511 (43%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 36  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 95

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 96  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 272

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 273 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 332

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 333 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 392

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 393 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 451

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 452 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 507

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 508 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 538


>gi|254671245|emb|CBA08498.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 717

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 222/508 (43%), Gaps = 53/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 36  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 95

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 96  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDI 272

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 273 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 332

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 333 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 392

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 393 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 451

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 452 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQE- 506

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +   +  V  E+I    IL     P L
Sbjct: 507 GQDERLHEVCSELINAFTILTAYLAPVL 534


>gi|307595974|ref|YP_003902291.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551175|gb|ADN51240.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 584

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 238/513 (46%), Gaps = 47/513 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R +  I +A  Y  A PH+G+    ++ ADV  R+ RL G DV+F +G+DEHG  I   A
Sbjct: 14  RRRWVIGSAWPYIYAVPHLGNLIGSVLSADVFTRYLRLRGDDVVFVSGSDEHGTPIEVEA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV  +   D+     + + ++ +IS+D++ RT    H +  +  + K+   G ++  
Sbjct: 74  LQLGVKPRELTDRMHEIVKRLFELWEISFDNYTRTESPVHREFVKEFFLKLYRNGYVFTR 133

Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHN---------------------P 156
                Y  +D  Y  D  +     Y G D    +   N                     P
Sbjct: 134 EDEVPYCPKDRIYLPDRFIIGTCPYCGYDKARGDQCENCGRLLEPRLLINPRCAICGSKP 193

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           + W++   ++  L+  +D++  Y E +    LP   +   +  +K GL+  +++R    W
Sbjct: 194 I-WVKTRHWYLDLTKLEDRVRKYVEGNTA--LPENAKQMSLGMLKEGLRPRAITRDN-KW 249

Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTT-GYL---DNPDGSKAKFWPADLHVI---GKDI 267
           GI+   P      +YVW +A+  Y++ T  Y     N D  K  ++  +  V+   GKD 
Sbjct: 250 GIEAPFPGADNKTIYVWFEAVLGYISATIEYFRGKGNEDEWKRYWFDPNTRVVFFVGKDN 309

Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323
           + FH I  PA L+++  P  +P    S  ++L +G+K SKS  +G  ID  E +  + VD
Sbjct: 310 IPFHVILLPAMLIASGDPYVMPYTTASTEYLLFEGKKFSKSQRIGIWID--EALALMPVD 367

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R+ L+ +   G+D  +      + +N+ L + IGN + R ++ I   ++G +P+ G+ 
Sbjct: 368 YWRFVLIYQRPEGRDTSFAWHQALEVINSILNDVIGNFIHRVLTFISTRFNGEVPS-GSL 426

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            + D           +   E+ +   +  AL +V+ +    +RY + ++PWEL K+N D 
Sbjct: 427 RDVDVKYRDEALSHFRSSEEHYEKIELKDALMEVVEIARVGNRYLNERQPWELIKSNRDE 486

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           A  V+   + +++ L+I L   +P+    ++ +
Sbjct: 487 AGAVILNALHMVKALSIGLWPVMPRSMEDLWSM 519


>gi|189500062|ref|YP_001959532.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495503|gb|ACE04051.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 703

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 244/543 (44%), Gaps = 69/543 (12%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  ++TA+ Y N   H+GH A   + AD+  RF R+ G +++   G+DEHG  I   A  
Sbjct: 7   RTLVTTALPYANGPVHLGHLAGVYLPADIYVRFKRMQGENIIHIGGSDEHGVPITITADK 66

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G++ +  VD+ +SRN  D  +   IS+D + RTT   H  T +  + +I  K    K  
Sbjct: 67  EGISPQDVVDRYHSRNM-DAFERCGISFDHYGRTTSPVHFRTAQEFFSEIERKNIFVKKK 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG------------------- 164
              +Y      Y +D  V  G      N + N  Q  E+ G                   
Sbjct: 126 ERHFYDPEARRYLSDRYVV-GTCPVCNNPEANGDQ-CEQCGTHLSPRELSNPRSKLSDRT 183

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRK 212
                   ++F L  +QD+L ++ +SH +     + R  V+++ ++    GLKD +++R 
Sbjct: 184 PELRETLHWYFPLGRFQDQLKNFVDSHDD-----DWRANVLNYTRTWLNQGLKDRAITRD 238

Query: 213 TFDWGIKIP---DDPQ-YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD----LH 261
              WGI +P   D+ Q  ++YVW DA+  Y++ T      +G+      +W +     ++
Sbjct: 239 -LHWGIPVPLDTDEAQGKVLYVWFDAVLGYISFTREWAEKEGNPELWRDYWQSSECRIIN 297

Query: 262 VIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            IGKD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   
Sbjct: 298 FIGKDNVVFHTLMFPAILMAWNEDRVGGKYSLADNVPASEFMNFEGRKFSKSRNYAVYLG 357

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E ++    D LRY +       KD  +     + R N +LA+ +GN + RS+      +D
Sbjct: 358 EFLDRFPADTLRYSIAMNYPESKDSDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSKFD 417

Query: 375 GMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           G +P   A T  D   L +  +   +++ +  +      A +  + +    +R+    +P
Sbjct: 418 GELPY--ACTGEDWDALGIDWADSFEKLDQAYEQFHFREAASLTMQIARLANRFLTESEP 475

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           W++ KT+ + A   + +++ +   LA+     +P  +N+I+ +L         QSLD  +
Sbjct: 476 WKVMKTDREAAGKTMALSLNLCYTLALAWYPVIPHTSNRIYALLGFD------QSLDDAV 529

Query: 494 KPG 496
           K G
Sbjct: 530 KKG 532


>gi|326562649|gb|EGE12951.1| methionyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 683

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 225/516 (43%), Gaps = 47/516 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +    +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMRHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ+ G+T +  +    + + +D A  L I +D++  T    +    + ++  +   G I
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFL-IDFDNYHSTHSSENQYFSQKIYTTLKQNGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNAQH--NPVQWME 161
           +       +   ++  +  D   KG      A  QY          YNA    NP   + 
Sbjct: 120 FTKDVEQLFD-TEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLS 178

Query: 162 EEG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                      YFF L  + + L ++ +S       I   N++  +  +GL    +SR  
Sbjct: 179 NSSPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSI--YNKLSEWFDAGLAPWDISRDA 236

Query: 214 FDWGIKIPD----DPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVI 263
             +G KIPD    +P    YVW+DA   Y+ +   L D  D    +++  D      H I
Sbjct: 237 PYFGFKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFI 296

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  +
Sbjct: 297 GKDIVYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPE 356

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +     
Sbjct: 357 YLRYYFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKL--SDE 414

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
            TE       +C+    EI    + +   +    +++   + + Y D QKPW L K    
Sbjct: 415 LTEPKLIDEIICAG--DEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKF 472

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D    V  V++ +  +L I L   +PKL+ +  + L
Sbjct: 473 DEVQKVCTVSLNIFHKLIIYLTPILPKLSEQAREFL 508


>gi|194334175|ref|YP_002016035.1| methionyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311993|gb|ACF46388.1| methionyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 704

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 237/522 (45%), Gaps = 57/522 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G D++   G+DEHG  I   A 
Sbjct: 6   KRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYRRLCGDDIIHIGGSDEHGVPITITAD 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+      D      IS+D + RT+ + HH T R  +++I+ K    K  
Sbjct: 66  REGVTPQDVVDRYHGMNLDAFTRCGISFDYYGRTSSRLHHATAREFFREINGKNIFVKKT 125

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG-------- 164
              ++      + +D  V             G   +      +P++ ++ +         
Sbjct: 126 EKQFFDPSAGRFLSDRYVTGTCPICSSPDANGDQCEQCGTHLSPMELIDPKSKLSNQVPE 185

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTF 214
                 ++F L  +Q++L  Y  SH +     + R+ V+++    +K GL D +++R   
Sbjct: 186 LRETLHWYFPLGIFQEQLEGYVNSHQD-----DWRSNVLNYTRTWLKQGLTDRAITRD-L 239

Query: 215 DWGIKIP-DDPQY---IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVI--- 263
            WG+ +P D P+    ++YVW DA+  Y++ T        NP+  +  +   D  +I   
Sbjct: 240 SWGVPVPVDGPEALGKVLYVWFDAVLGYISFTRQWAEDRGNPEEWRRYWQDPDCRIINFI 299

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVF-------SHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +PA L++ N    ++V+       +  F+  +G K SKS    +   E 
Sbjct: 300 GKDNVVFHTLMFPALLMAWNQGRDEEVYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 359

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY +       KD  +     + R N +LA+ +GN + RS+      ++G+
Sbjct: 360 LDSFPADTLRYCIAMNYPENKDSDFSWTDFQNRTNGELADTLGNFIKRSIDFSNVRFEGV 419

Query: 377 IPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +P   +    D   L +        + E  +N     A +  + +    +R+    +PW+
Sbjct: 420 VPCDCSM--DDWQGLGIDWQDSFACLDEAYRNFHFREAASLSMQIARRANRFLTESEPWK 477

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + K +P++A+  + +++ +   LA+     +P  A++I+ +L
Sbjct: 478 VIKQDPEKAAKTMALSLNLCYTLAVAFYPVIPSTASRIYAML 519


>gi|325143425|gb|EGC65754.1| methionyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197336|gb|ADY92792.1| methionyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 684

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 224/508 (44%), Gaps = 53/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D  D   I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTD-FGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
             A  +  V  E+I    +L     P L
Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502


>gi|161869048|ref|YP_001598214.1| methionyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|304388827|ref|ZP_07370882.1| methionine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|161594601|gb|ABX72261.1| methionyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|304337231|gb|EFM03410.1| methionine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 720

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 39  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 98

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 99  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 217

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 275

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H I
Sbjct: 276 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFI 335

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 336 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 395

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 396 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 454

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 455 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 510

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 511 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 541


>gi|187649784|sp|A9LZS9|SYM_NEIM0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 685

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 219/511 (42%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|119871860|ref|YP_929867.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|187647759|sp|A1RRE2|SYM_PYRIL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119673268|gb|ABL87524.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 567

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 238/527 (45%), Gaps = 47/527 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ R  G DV+F +G+D HG  I   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRFRGHDVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + +  +  +   ++    DIS+D +  T    H    +  + KI + G I+    
Sbjct: 63  LGVDPEEYAKKMHQIVAELFKRWDISFDLYTHTHSDTHIKFVQNFFLKIYNNGYIFTKEE 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159
              Y  RD+ Y  D  +        Y+ A G Q  N     +P Q              W
Sbjct: 123 EVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLIEPRCAICGSRPEW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + ++  L   +D++  Y E +P   LP   +   +  +K GLK  +++R    WGI 
Sbjct: 183 RITKHWYLDLRKLEDRIRKYVEENPH--LPPNAKEMSLGMLKEGLKPRAITRDN-KWGIP 239

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHA 272
              P      +YVW +A+  Y++    L   D  K  ++W       +  +GKD + FH 
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVELFREDAGKWERYWKDPETKIVFFVGKDNIPFHV 299

Query: 273 IYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALRYF 328
           I  PA LL+      LP    S  ++L++G+K SKS   G  ID  E ++ +  D  R+ 
Sbjct: 300 IILPALLLANGEGYTLPTTTASTEYLLYEGDKFSKSRRWGIWID--EALQLMPPDYWRFI 357

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+      +D  +      + +N  + + +GN ++R ++ I     G++P PGA T  DE
Sbjct: 358 LIYIRPENRDTSFTWALALEIINKIMNDDVGNYINRVLTFIKNRMGGVVPPPGAPTREDE 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             ++   ++ ++  ++     +  AL  V+ +  E +RY +A+ PWEL + + + A+ V+
Sbjct: 418 EFINRVIQLFKKAEKHYDAIELKDALHTVVEIAREGNRYLNARAPWELLRRDIEVANAVM 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           Y     ++ +A  L    P+ A +++ +L ++       S D+  KP
Sbjct: 478 YRAYWSLKTIAAGLTPVTPRSAAELWKMLGISQ-----PSWDEAYKP 519


>gi|330817988|ref|YP_004361693.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370381|gb|AEA61737.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 718

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 226/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPIMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K  +++     +   D   IS+D+F  T  + +      ++  + + G I +  
Sbjct: 77  QEGLSPKQLIERVWGEHKRDFDSFGISFDNFYTTDSEENRVLSENIYLALKEAGLIAERD 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME---------- 161
               Y    E +   D   KG      A  QY        + + P + +           
Sbjct: 137 IEQAYDPVKEMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELINPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  +FF+LS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHHFFKLS--DPRCENFLRGWVGGLAQPEATNKMREWLGDAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL----HVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L +  G   + W  P       H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLADRLGLDFEAWTRPGSTAEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I+   VI+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGTKMSKSRGTFINAKSVIDTGMNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   +    + RVN+DL     N+ SR+   ++K ++G +      + 
Sbjct: 374 YYYAAKLNATMEDLDLNLADFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D  KPWE  K   N   
Sbjct: 430 MNHPLLASLREAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWEQAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +PKL   +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPKLVEAVEAFLGIA 526


>gi|94311701|ref|YP_584911.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987861|sp|Q1LJN4|SYM_RALME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|93355553|gb|ABF09642.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 690

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 224/516 (43%), Gaps = 50/516 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+  
Sbjct: 5   RILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKE 64

Query: 66  GVTTKVFVDQN-SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T K  +D+  + + RD  + L +S+D++  T  + +   C  ++  +  +  I +   
Sbjct: 65  GITPKQLIDRVWTEHKRDFDNFL-VSFDNYYSTDAEENRQLCEKIYLALKAEDLITERDV 123

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQYYNAQH------------NPVQWME------ 161
             +Y      +  D     E  K GA  QY ++              NP   +       
Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVR 183

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSRKTF 214
                +FF+LS    +  ++       +   E  N++  ++      S L D  +SR   
Sbjct: 184 KSSTHFFFKLS--DPRCETFLREWVADLAQPEASNKMQEWLGAEGEASTLSDWDISRDAP 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 242 YFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKRGIDFDAWVGPHSTAEQYHFIGKDIL 301

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LR 326
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I   +   + G++   LR
Sbjct: 302 YFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFIT-AQSYTDTGMNPEWLR 360

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + D    RVN+DL     N+ SR+   ++K +DG +    A   
Sbjct: 361 YYFAAKLNASMEDLDLNLDDFVARVNSDLIGKYVNIASRAAGFLVKRFDGKV-NEAALA- 418

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
               +L    +   ++ +  + +   +AL  V+ L   V+ + D  KPWEL K    R +
Sbjct: 419 --NPLLEQLRQAAPQLAQYYEGREYSKALRLVMELTDAVNAFVDTNKPWELAKDESKRDA 476

Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                 V++E  R L I L+  VP +A  +   L V
Sbjct: 477 LHAACSVSLEAFRLLTIYLKPVVPTMAAGVERFLNV 512


>gi|298370508|ref|ZP_06981824.1| methionine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281968|gb|EFI23457.1| methionine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 685

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 222/511 (43%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               S  ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----SGSTLLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|295698760|ref|YP_003603415.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157378|gb|ADD79823.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 543

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 225/517 (43%), Gaps = 58/517 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++ + ++ A  Y N   H+GH  E I AD+  R+ ++ G +VLF +  D HG  I   A
Sbjct: 2   KKKTILVTCAFPYSNGPIHLGHLLEHIQADIWVRYRKMKGEEVLFMSSDDSHGAAIMLKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            +  +     + +  +  ++      IS+D +  T +  + +  + ++  +  +G I K 
Sbjct: 62  IDLDMDPSKMIQKMHKEHKEDLLKFSISHDIYCSTNDLENKNITQKIYLILKKRGYIKKK 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKG------ADGQY----------YNA----------QHNP 156
             S  Y   ++ ++  D   KG      +  QY          YN+            +P
Sbjct: 122 IVSQLYD-SEKKFFLPDRFVKGNCPNCLSPDQYGDNCEICGVVYNSTDLLHPRSILSQSP 180

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++  + +  F  LS +Q KL  +    P        +N+ I ++  GLKD  +SR    +
Sbjct: 181 LKIKKTKHIFLILSKFQKKLFEWINCMP---FSQSVKNKSIEWISKGLKDWDISRDDPYF 237

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G KIP++ +   YVW+DA   Y+ ++  L      S  +FW  +      H IGKDI+ F
Sbjct: 238 GFKIPEEKRKYFYVWLDATIGYIASSRTLFKKRKISFQRFWKNNSEDLLFHFIGKDIIYF 297

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WP+ L       P  +F HG +   G+K+SKS GN I     ++    D LRY+  
Sbjct: 298 HTLFWPSILEGIKYRKPNNIFVHGHLTVDGQKMSKSKGNFISANSYLKHFDSDYLRYYFA 357

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--------DGMIPTPG 381
            +++   +D  ++      ++N +L N I NL SR+ S I K +        D M     
Sbjct: 358 SKLSSKFEDVNFNLTDFSNKINKELINKIINLASRNASFIKKYFCNYLSKKLDNMFLYQK 417

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTN 440
              ES            ++I ++  +   + A+ ++  L    ++Y +   PW++  K  
Sbjct: 418 FIKES------------KKIEQSFISLNFNSAVKRICFLSDLANKYVEMCSPWKIDPKLE 465

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   +    + + + L   L   +PK+A +  + L
Sbjct: 466 NKKMHEICSTGINLFKILMTYLSPILPKIAERSSNFL 502


>gi|46446299|ref|YP_007664.1| putative methionine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|68565984|sp|Q6MDG0|SYM_PARUW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46399940|emb|CAF23389.1| putative methionine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 698

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 226/507 (44%), Gaps = 34/507 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + AD  ARF RL   DVL+  G+DE+G  I  +A 
Sbjct: 12  QKILITSALPYANGPLHFGHIAGAYLPADCYARFQRLMKKDVLYICGSDEYGIAITLSAD 71

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T +  VD      +   + L IS+D + RTT K H +     +  +   G I +  
Sbjct: 72  LAGRTPQEHVDLFHHINQSFFEQLQISFDHYSRTTWKGHVEPTHQFFNDLLQNGYIEERT 131

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGAD----GQYYNAQH--NPVQWMEEEGYF 166
               YS +D+ +  D            E  +G +    G  Y A    NP   + +    
Sbjct: 132 TDQLYSEKDQKFLADRYVVGTCPRCGFENARGDECPCCGASYEATELKNPRSKLTDASLI 191

Query: 167 FRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGIKIP-- 221
            R + +   LL  ++    E++     +  VI+F++  +  L     T D  WGI +P  
Sbjct: 192 LRPTKHWFLLLEKFKKPLMEWLETKNWKPNVINFIRGYIDHLHARAITRDMKWGISVPLP 251

Query: 222 DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW--PAD--LHVIGKDILRFHAIY 274
           D    ++YVW DA   Y++ T     L   +    K+W  P    ++ IGKD + FHA  
Sbjct: 252 DSEGKVLYVWFDAPIGYISATKEWALLRGEEKLWEKYWLDPETKLVNFIGKDNIPFHASI 311

Query: 275 WPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +PA ++  N P  L  ++ ++ F   +G++ SKS G  ID  +  +    D +RY +   
Sbjct: 312 FPAMIMGQNQPYKLVDELPANEFYNLEGKQFSKSDGWYIDLEDFFKHYTSDQIRYAIASN 371

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D  +     + R N+DL    GNLV+R +  I     G +P  G   E D   L 
Sbjct: 372 APETSDSEFTWKDFQLRCNSDLLGKYGNLVNRVLVFIHNQCQGKVPESGVLEEQDRKFLK 431

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
               ++ +   +     + +A   ++ L    + YFD++KPW+  K +    R  T L  
Sbjct: 432 NIQDLVDQAAASYSTFKVRKASQIMMELSQLGNVYFDSKKPWQDAKNDYTKGRMHTTLNC 491

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            +E ++ LA++    +P  A+K++  L
Sbjct: 492 CMECLKALALISFPIIPTAASKVWQFL 518


>gi|220917741|ref|YP_002493045.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955595|gb|ACL65979.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 694

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 222/516 (43%), Gaps = 59/516 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   H+GH  E +  DV  RF R  G DV +    D HG  I   A  
Sbjct: 3   QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDDVAYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FV++             + +  +  T    +      ++  +  KG IYK   
Sbjct: 63  VGMTPKAFVEKYRAEQHADFHAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLIYKKSV 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYN---------------------AQHNPVQ 158
              Y   D  +  D  V       G   QY +                      + +PV 
Sbjct: 123 EQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCAICRSSPVV 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
              +  Y        + ++  + +    + P  R  E +    + L+D  ++R    F +
Sbjct: 183 RASDHAYVNLRKPDVNAVIHEWVNAEGHLEPAVR--EQVKGWLADLQDWCITRDAPYFGF 240

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY---LDNPDGSK---AKF--------WPADL-H 261
            +  P+ P   +YVW+DA   YL++  +    + PDG +   A+F         PA L H
Sbjct: 241 PVTDPEFPGKFLYVWVDAPIGYLSSAEHYFAAEAPDGERLAPAEFERRYLAVGAPARLEH 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            IGKDILRFHA++WPA L +  L  P ++  HG +   GEK+SKS G  +     +E  G
Sbjct: 301 FIGKDILRFHAVFWPAMLWATGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLES-G 359

Query: 322 VDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +D   LRYF    +  G  D     D  + R+NADLAN + NL SR V+ +L+   G + 
Sbjct: 360 LDPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASR-VAALLQRLPGGVT 418

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELK 437
            P      D  I +     ++  R   Q  L  R + +++S  + V +R     KPWE  
Sbjct: 419 AP-----LDPEIAAATREAVKGARAAYQ-VLETRDVVRLVSQAASVCNRRVQETKPWENP 472

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             + +R  +VLY T + +  LA +L   +P+ +  +
Sbjct: 473 AGDAER--SVLYTTGKALLGLARVLAPILPRFSAAL 506


>gi|52218647|dbj|BAD51240.1| methionyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 654

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 227/486 (46%), Gaps = 44/486 (9%)

Query: 29  IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+T +  VD+     +   +   
Sbjct: 6   VPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGITPQDVVDRYHFLIKKSFEEFG 65

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----YK 143
           IS+D + RT+ K HH+     +KK+ +KG+  +     +Y      +  D  +     + 
Sbjct: 66  ISFDVYSRTSSKTHHELASDFFKKLYEKGEFIEKTSEQYYDEEAHQFLADRYITGECPHC 125

Query: 144 GADGQYYN---------------------AQHNPVQWMEEEGYFFRLSAYQDKLLSY-YE 181
            ++G Y +                     +   PV   E + ++  L  ++  L  +  E
Sbjct: 126 HSEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVM-KETKHWYLPLDKHETWLRQWILE 184

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYL 239
            H E+   +    +  S++  GL+  ++SR   DWGI +P +     ++YVW DA   Y+
Sbjct: 185 EHKEWRPNV--YGQCKSWLDMGLQPRAVSR-DLDWGIPVPVEGAEGKVLYVWFDAPIGYI 241

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSH 293
           + T  L  PD  +   W  D     +H IGKD + FH I +PA L +  +  LP  V S+
Sbjct: 242 SNTKEL-LPDSWET--WWKDPETRLVHFIGKDNIVFHCIVFPAMLKAEGSYILPDNVPSN 298

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            F+  +G+KIS S    +   E +E+     D LRY L       KD  +     + R N
Sbjct: 299 EFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYVLTANAPETKDNDFTWKDFQARNN 358

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            +L    GN V+R++ +  K ++G +P  G  T+ D+  L   S V  E+ + +      
Sbjct: 359 NELVAVYGNFVNRAMVLTQKYFEGKVPAAGELTDYDKETLKEFSDVKAEVEKLLNVFKFR 418

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A  + ++L    ++Y    +PW+L KT+ +R  T+L ++++++  LAI  + F+P  + 
Sbjct: 419 DAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGTILNISLQLVANLAIAFEPFLPFSSE 478

Query: 472 KIFDIL 477
           ++  +L
Sbjct: 479 RLRQML 484


>gi|315927701|gb|EFV07030.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni DFVF1099]
          Length = 380

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 132/218 (60%), Gaps = 2/218 (0%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+SKS GNV+ P EV
Sbjct: 1   PAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEV 60

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R + M  K   G 
Sbjct: 61  VDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMSTKYSQGN 120

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           I   G     +   L+     L    E ++N   +R L ++   +S  +      +PW L
Sbjct: 121 ISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAISKYEPWSL 179

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            K N  ++A+ ++ +   ++ + ++LL   +PK + K+
Sbjct: 180 IKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKV 217


>gi|169829851|ref|YP_001700009.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168994339|gb|ACA41879.1| Methionyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 551

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 233/540 (43%), Gaps = 48/540 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R  + I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I+  A 
Sbjct: 7   RMTIVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAA 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               TT+   +     F+   + L  +YD + RT  + HH++ + L+ ++     +YK  
Sbjct: 67  QENTTTEAIANHYHEEFKKCFNKLGFTYDLYTRTDAEHHHESVKGLFLQLLANHFLYKKK 126

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH--NPVQWM------------- 160
               Y   D+ +  D  V         K    Q  N     +P+  +             
Sbjct: 127 IEQAYCETDQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKSCKICGNEPVI 186

Query: 161 -EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E E ++F  S +Q KL S+  E+  E             ++  G+ D +++R   + GI
Sbjct: 187 RETEHFYFTFSQFQGKLESFLSEAKAEKRWRDNALGLTERYLAEGVPDRAVTRDLPN-GI 245

Query: 219 KIPDDPQY---IMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADL---HVIGKDILRFH 271
            +P  P +    +YVWI+A+  YLT +  +      +    W  +    +V GKD + FH
Sbjct: 246 DVPV-PGFDGKKIYVWIEAVAGYLTASLEWAKQHHMAIEDLWNEETISYYVHGKDNIPFH 304

Query: 272 AIYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + WPA L+   +  LP  + S+ ++  +  K+S S    +    ++     D++RYFL 
Sbjct: 305 TVIWPAILMGLGVQALPTHIVSNEYLTLEKRKLSTSQNWAVWVPYILSRYDADSIRYFLT 364

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +         N +L    GN V+R++  I K +   +P      E D +I
Sbjct: 365 TNAPENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFASQVPQ----AEVDSTI 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                ++  E+   ++     +AL  +   +   +RYFD Q+PW   K N +  +  L  
Sbjct: 421 RKQTIQLFNEVGILIEGGRFKQALETIFEYIRGANRYFDEQQPWLQVKENVEAGNCTLAT 480

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V +I  L  LLQ F+P  A K+ D+L + DE    + ++        L KT + I P F
Sbjct: 481 CVYIIANLGQLLQPFLPFSAAKVRDMLGI-DEIMWHEQVE--------LPKTIEDITPLF 531


>gi|240114715|ref|ZP_04728777.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600362|ref|ZP_06134529.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584493|gb|EEZ49169.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 684

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 420 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|240116915|ref|ZP_04730977.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 700

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 376 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 435

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 436 -----SGSALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|148244673|ref|YP_001219367.1| methionyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|187651803|sp|A5CWL9|SYM_VESOH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146326500|dbj|BAF61643.1| methionyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 545

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 246/548 (44%), Gaps = 65/548 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N + H+GH  E I  D+  RF ++ G +  +    D HG  I   A   
Sbjct: 5   KILVTSALPYANGEIHLGHLLEYIQTDIWVRFQKMMGNECHYVCADDAHGTAIMLKADEL 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +V +   S   +       I +  +  T  + + D    ++ K++  G I     S
Sbjct: 65  DITPEVLIKNMSNKHQIDFQSFSIDFSQYHSTHSQENKDISTNIYNKLNVAGFIKTRVIS 124

Query: 126 GWYSLRDEAYYND-----DEVYKGADGQY------YNAQHNPVQW--------------M 160
             +    + +  D     D    G++ QY        A ++ ++                
Sbjct: 125 QAFDPLKQMFLADRFIKGDCPKCGSNEQYGDNCEVCGATYSSIELKNAKSVISGVTPITK 184

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E YFF L  ++ +L  + ++     L     N++  + K GL+   +SR    +G +I
Sbjct: 185 DSEHYFFDLPQFEVQLKEWTKAGH---LQDAISNKLSEWFKEGLQQWDISRDAPYFGFQI 241

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           P       YVW+DA   Y+ +   L D  +    +++  D      H IGKDI+ FHA++
Sbjct: 242 PAVEGKYFYVWLDAPIGYMASFKKLCDEQNIDFNEYFNKDSNTELYHFIGKDIIYFHALF 301

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L+ +N   P  +F+HGF+   G+K+SKS G  I     +  +  + LRY+   +++
Sbjct: 302 WPAMLIGSNYRTPSAIFAHGFLTINGQKMSKSRGTFIQARTYLNYLNPEYLRYYYAYKLS 361

Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              D    +    K+R+N+DL   + N+ SRS   I+K ++  +           S  ++
Sbjct: 362 SKIDDIDLNLIDFKQRINSDLVGKVVNIASRSAGFIVKKFNKTL-----------SSYTI 410

Query: 394 CSRVLQE-------IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            S+  QE       I ++ + +  ++A+  +I L ++ ++Y D  KPW+L K  P++ + 
Sbjct: 411 ESKFYQEFFDCGDIIAKHYEARNYNQAMRVIIKLANKANQYIDKHKPWQLIK-KPNQQTQ 469

Query: 447 VLYVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK-- 501
           V  VT   + + R L   L+  +P +A ++   L + + +       Q LK   + H+  
Sbjct: 470 VHDVTSLAINLFRVLMTYLKPVLPIMAKQVEKFLNIDELHW------QDLKYPLIKHQIN 523

Query: 502 TFDPIFPR 509
           TF P+  R
Sbjct: 524 TFKPLMLR 531


>gi|327312639|ref|YP_004328076.1| methionine--tRNA ligase [Prevotella denticola F0289]
 gi|326945094|gb|AEA20979.1| methionine--tRNA ligase [Prevotella denticola F0289]
          Length = 687

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 238/520 (45%), Gaps = 43/520 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +   D+  +  +D  +   IS+D + RTT   H+      ++K+ D G + 
Sbjct: 64  RAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160
           +     +Y      +  D     E     +   Y  Q              NP   +   
Sbjct: 124 EKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                + + ++  L+ YQ+ L  +  E H E+   +    +  S++   L+  +++R   
Sbjct: 184 QPVIRKTKNWYLPLNNYQEWLKQWILEDHKEWRPNV--YGQCKSWLDMDLQPRAMTRD-L 240

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----LHVIG 264
           DWGI +P +     ++YVW DA   Y++ T  L + D    GS  K+W       +H IG
Sbjct: 241 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHFIG 300

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--EVG 321
           KD + FH + +P  L +     LP  V ++ F+  +  KIS S    +   E +   E  
Sbjct: 301 KDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFEGK 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P  G
Sbjct: 361 QDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPACG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   +     V +++   ++      A  + ++L    ++Y    +PW++ KT+P
Sbjct: 421 ELHDVDRQAIQEFKDVKEKLEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKTDP 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R  T+L ++++++  L+I  + F+P  + K+  ++ + +
Sbjct: 481 KRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTE 520


>gi|311108811|ref|YP_003981664.1| methionyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310763500|gb|ADP18949.1| methionyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 688

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 247/568 (43%), Gaps = 80/568 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRIL-------WKKISD 115
           +T +  V + +       +   I +D +  T    +     D  R L        + I  
Sbjct: 65  ITPQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSQDIYRALKAQDLIETRSIEQ 124

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM--------------E 161
             D  KG +     ++ E      +   G   +   A + P + +               
Sbjct: 125 FYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTELINPYSALTGATPVLKS 184

Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK---------SGLKDLSLSR 211
            + +FF+LS  +  + L  + +          + E+++  +         + L D  +SR
Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGSNAAGGKHLQPEMLAKTREWLGSDDGEAKLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----------LDNPDGSKAKFWPADL 260
               +GI+IPD P    YVW+DA   YL +              L +P G   +     +
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDKLLDPAGPTEQ-----V 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L  A    P  V  HGFI   GEK+SKS G  I P+  + E+
Sbjct: 300 HFIGKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYL-EL 358

Query: 321 GVDA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G++A  +RY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ S I K +DG++
Sbjct: 359 GMNAEWMRYYIAAKLNARVEDMDFNPEDFIARVNSDLIGKYVNIASRAASFITKHFDGVL 418

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                ++    ++ +  +   + IR   + +  +RA+ ++++    +++ FD  +PW L 
Sbjct: 419 ----GYSGDTSALAAEYAEQAESIRAAFEAREYNRAIREIMAYADRLNQAFDTAQPWVLA 474

Query: 438 K---TNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------- 483
           K   T  D     L      ++   + L+++L   +P+LA ++   LF A          
Sbjct: 475 KGIATADDAQKAALQDICSRSLAGFKALSVMLAPVLPELAERVALELFGAQAPFTWADAA 534

Query: 484 ------RCFQSLDQRLKPGFMLHKTFDP 505
                   F+ L QR++P  ML   F+P
Sbjct: 535 VLPQRVAPFKHLMQRVEPQ-MLEDLFEP 561


>gi|258647690|ref|ZP_05735159.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852523|gb|EEX72392.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 680

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 232/519 (44%), Gaps = 55/519 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   +  I+ A+ Y N   HIGH A   I +D+ AR+ RL    VLF  G+DEHG  I  
Sbjct: 4   KTFNRTLITAALPYANGGVHIGHLAGVYIPSDIYARYLRLRNKPVLFICGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T +  VD+  +  +D  +   IS+D + RTT   H  T    ++ + DKG+  
Sbjct: 64  RARREHCTPQDVVDRYHKLIKDSFEAFGISFDIYSRTTSAVHEKTATEFFRTLYDKGEFI 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ----HNPVQWMEE-EGYFFRLSAYQ-- 173
           +         ++   Y D+E       +Y   +    H P  + ++ E     LS  +  
Sbjct: 124 E---------KESEQYYDEEAKTFLADRYITGECPHCHKPGAYGDQCENCGTALSPLELI 174

Query: 174 DKLLSYYESHP------EFILPIER----------------RNEVISFVKS----GLKDL 207
           +   +   S P       + LP+++                R+ VI   KS    GL+  
Sbjct: 175 NPQSAISGSKPVLRTTKHWYLPLDKHQPWLEKWILGEHADWRSNVIGQCKSWFDMGLQPR 234

Query: 208 SLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LH 261
           ++SR   DWGI +P +     ++YVW DA   Y++ T  L   D     +W +D    +H
Sbjct: 235 AVSRD-LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTRELLPNDWET--WWKSDDTRLVH 291

Query: 262 VIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            IGKD + FH I +PA L +     LP  V S+ F+  +  KIS S    +   E + + 
Sbjct: 292 FIGKDNIVFHCIVFPAMLKAHGEYVLPDNVPSNEFLNLEDRKISTSRNWAVWLHEYLTDF 351

Query: 321 --GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY L       KD  +     + R N +L    GN V+R++ +  K Y G +P
Sbjct: 352 PDKQDVLRYVLTANAPETKDNNFTWKDFQARNNNELVAVYGNFVNRALVLTHKYYGGEVP 411

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G     DE+ ++    V  ++   + +     A  + ++L    ++Y    +PW++ K
Sbjct: 412 ACGTLLPEDEATIAEFKDVKDKVEYLLDHFRFRDAQKEAMNLARIGNKYLTDAEPWKVIK 471

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+P+R  T+LY+ ++++  LA     F+P  + ++  +L
Sbjct: 472 TDPERVKTILYIALQLVANLATAFAPFLPFSSERLRRML 510


>gi|240120254|ref|ZP_04733216.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 700

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 376 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 435

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 436 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|319779090|ref|YP_004130003.1| Methionyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109114|gb|ADU91860.1| Methionyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 693

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 226/523 (43%), Gaps = 58/523 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++ +TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   AQ  G
Sbjct: 5   IFATTALPYANGSFHIGHIMEFIQADIWVRAMRMFGHKVYFMGADDAHGAPIMLKAQAEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117
           +T +  V + +       +   I +D +  T    + +  + ++K +   G         
Sbjct: 65  ITPEELVSRIASERPQYLNGFQIKHDFWHSTHSTENIEVSQNIYKALKKNGFISTKTIEQ 124

Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-------------- 161
             D  KG +     ++ E      +   G   +   A + P   +E              
Sbjct: 125 FFDPIKGMFLPDRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLIEPYSTLTKASPELRT 184

Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---- 216
            E +FF LS  +  + L  + ++   +     + EV++  K  L D     K  DW    
Sbjct: 185 SEHFFFNLSDPRCIQFLHDWTNNSGNLNKTHLQGEVLAKTKEWLGDSESDSKLGDWDISR 244

Query: 217 -----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG------SKAKFWPADLHVIGK 265
                GI IPD+     YVW+DA   YL         +G         K   + +H IGK
Sbjct: 245 DAPYFGIPIPDEKDKYFYVWLDAPAGYLAALKAYTKKEGLDYDSIVDPKGETSQIHFIGK 304

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
           DI+ FHA++WPA L  ++  +P ++  HGFI  KGEK+SKS G  I P++ +  VG++  
Sbjct: 305 DIIYFHALFWPAMLKFSDRKVPDRIQVHGFITVKGEKMSKSRGTGISPLKYL-SVGLNPA 363

Query: 325 -LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY++  +++   +D  +  +    RVN+DL     N+ SR+ + I + +DG +     
Sbjct: 364 YLRYYIAAKLSAKVEDVDFTAEDFMVRVNSDLVGKYVNIASRASTFINRFFDGHL----- 418

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +   E       ++  E++ +++N    +A+  +++   +V+  FD  KPW L K   +
Sbjct: 419 -SFKTEEQFEEIKKLTDEVKADIENFEYSKAVRAIMAFADKVNTAFDQAKPWVLAKGFSE 477

Query: 443 RAST-------VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +         +    +   + +  LL    P+L+  I++ LF
Sbjct: 478 ASDETKAQLQDICSQAIAGFKAICTLLYPITPELSTSIYEDLF 520


>gi|317165158|gb|ADV08699.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 719

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 39  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 99  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 216

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 274

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 334

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 395 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 454

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 455 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 509

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 510 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541


>gi|197122949|ref|YP_002134900.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196172798|gb|ACG73771.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 694

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 218/517 (42%), Gaps = 61/517 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   H+GH  E +  DV  RF R  G +V +    D HG  I   A  
Sbjct: 3   QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDEVAYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FV++             + +  +  T    +      ++  +  KG IYK   
Sbjct: 63  VGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLIYKKSV 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
              Y   D  +  D  V           Q+  V   E  G  +     +D   +   S P
Sbjct: 123 EQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDV--CEHCGTTYDPRELKDPYCAICRSSP 180

Query: 185 ---------------------------EFILPIERRNEVISFVKSGLKDLSLSRKT--FD 215
                                      E  L    R +V  ++ + L+D  ++R    F 
Sbjct: 181 VVRASDHAYVNLHKPDVNAVIHEWVNAEGHLEPAVREQVKGWL-ADLQDWCITRDAPYFG 239

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY---LDNPDGSK-----------AKFWPADL- 260
           + +  P+ P   +YVW+DA   YL++  +    + PDG +           A   PA L 
Sbjct: 240 FPVTDPEFPGKFLYVWVDAPIGYLSSAEHYFAAEAPDGERLAPAEFERRYLAAGAPARLE 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDILRFHA++WPA L +  L  P ++  HG +   GEK+SKS G  +     +E  
Sbjct: 300 HFIGKDILRFHAVFWPAMLWATGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLES- 358

Query: 321 GVDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G+D   LRYF    +  G  D     D  + R+NADLAN + NL SR V+ +L+   G +
Sbjct: 359 GLDPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASR-VAALLQRLPGGV 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWEL 436
             P      D  I +     ++  R   Q  L  R + +++S  + V +R     KPWE 
Sbjct: 418 TAP-----LDPEIAAATREAVKGARAAYQ-ALETRDVVRLVSQAASVCNRRVQETKPWEN 471

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              + +R  +VLY T + +  LA +L   +P+ +  +
Sbjct: 472 PAGDAER--SVLYTTGKALLGLARVLAPILPRFSAAL 506


>gi|254282433|ref|ZP_04957401.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678636|gb|EED34985.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 523

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 209/486 (43%), Gaps = 43/486 (8%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I  D+  RF R  G    +    D HG  I  +A+  GVT +V +D+   +    ++ 
Sbjct: 3   EQIQTDIWVRFQRSRGHQCHYVCADDAHGTAIMLSAERQGVTPEVLIDRVRSDHMASSEG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA- 145
             + +D+F  T    +      +++ +   G I        +   ++  +  D   KG  
Sbjct: 63  FLVEFDNFYSTHSPENQQWSERIFRDLESGGHIAVREVIQAFD-EEKGLFLSDRFIKGTC 121

Query: 146 -----DGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYY 180
                 GQY        A + P   ++               +  FF+LS +Q+ L  + 
Sbjct: 122 PTCKTAGQYGDNCEACGATYTPADLIDPVSALSGSVPIEKASDHIFFQLSHFQELLEGWV 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +     L     N++  ++ +GL+D  +SR +  +G +IP  P    YVW+DA   Y+ 
Sbjct: 182 ATDA---LQSAIANKLREWIDAGLQDWDISRDSPYFGFEIPGHPGKYFYVWLDAPIGYIA 238

Query: 241 T-TGYLDNPDGSKAKFW--PADL---HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
               +          +W  P D    H IGKDI+ FH ++WPA L  A L +P  +F HG
Sbjct: 239 AWENHCQRTGEDFDSYWKSPTDTELYHFIGKDIINFHGLFWPAMLHCAGLRMPSAIFVHG 298

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNAD 353
           F+   G K+SKS G  I     ++ +  + LRY+   +++ G D    +     +RVN+D
Sbjct: 299 FLTVDGTKMSKSRGTFIMARTYLDHLDPEYLRYYFAAKLSSGVDDIDLNLSDFVQRVNSD 358

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L   + N+ SR    + K +D  +    A T  +  +++        I E+ +N   +RA
Sbjct: 359 LVGKVVNIASRCAGFLRKRFDNQL----ADTCDEPELVADFINQGSSIAEHYENLEFNRA 414

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           +  +I+L    ++Y D +KPW + K          V  V + + R L   L+  +P +A 
Sbjct: 415 MRDIIALADRANQYIDEKKPWVMAKEEGRESEVQAVCSVGINLFRILMTYLKPVLPGMAE 474

Query: 472 KIFDIL 477
           +  D +
Sbjct: 475 RAEDFM 480


>gi|78189366|ref|YP_379704.1| methionyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123743436|sp|Q3AQR4|SYM_CHLCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78171565|gb|ABB28661.1| methionyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 705

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 232/527 (44%), Gaps = 59/527 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    +  ++TA+ Y N   H+GH A   + AD+  R+ RL G D++   G+DEHG  I 
Sbjct: 4   MPHFSRTLVTTALPYANGPVHLGHLAGVYLPADLYVRYKRLKGEDIIHIGGSDEHGVPIT 63

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +A+  G++ +  VD+      D      IS+D + RT+   HH T +  +  I  KG  
Sbjct: 64  ISAEKEGISPRDVVDRYHAMNLDAFTRCGISFDYYGRTSSAVHHATAQEFFSDIEQKGIF 123

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +     ++ L+   + +D  V             G   +      +P++ +        
Sbjct: 124 QQKTEKLFFDLQAGRFLSDRYVTGTCPVCNNPEANGDQCEQCGTHLSPLELLNPKSKLSD 183

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                 E   ++F L  +Q  L  Y  SH       E R  V+++     K GL D +++
Sbjct: 184 ATPELRETLHWYFPLGRFQAALEEYVNSHEG-----EWRPNVVNYTRTWFKQGLNDRAIT 238

Query: 211 RKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------- 259
           R   DWG+ +P    +    ++YVW DA+  Y++ T       G+ A+ W          
Sbjct: 239 RD-LDWGVAVPLQSAEAVGKVLYVWFDAVLGYISFTKEWAALQGN-AELWKTYWQDPETR 296

Query: 260 -LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
            +H IGKD + FH + +P+ L++ N         L   V +  F+  +G K SKS    +
Sbjct: 297 LIHFIGKDNVVFHTLMFPSILMAWNEGKTTDCYNLADNVPASEFMNFEGRKFSKSRNYAV 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              E +++   D LRY +       KD  +     + R N +LA+ +GN + RS+     
Sbjct: 357 YLGEFLDKFPADTLRYSIAMNYPESKDTDFSWQDFQNRTNGELADTLGNFIKRSIDFTNT 416

Query: 372 DYDGMIPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            ++G++  P + T+ +   L +     L+++    +      A    + +    +RY  +
Sbjct: 417 RFEGVV--PASVTKEEWDNLGIDWQATLEQLDSAYEGFHFRDAATLGMEIARAANRYLTS 474

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +PW++ K + + A+T + +++ +   L+I L   +P+  N+I  +L
Sbjct: 475 SEPWKVIKVDREAAATTMALSLNLCHALSIALYPVIPETCNRIRAML 521


>gi|254672536|emb|CBA06112.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 717

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 224/511 (43%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 36  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 95

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 96  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 272

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 273 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 332

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 333 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 392

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 393 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGCLKDV- 451

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 452 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 507

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +PK+A
Sbjct: 508 QDERLHEVCSELINAFTMLTAYLAPVLPKVA 538


>gi|325860413|ref|ZP_08173525.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482071|gb|EGC85092.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 687

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 235/524 (44%), Gaps = 51/524 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +   D+  +  +D  +   IS+D + RTT   H+      ++K+ D G + 
Sbjct: 64  RAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160
           +     +Y      +  D     E     +   Y  Q              NP   +   
Sbjct: 124 EKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                + + ++  L+ YQ  L  +  E H E+      R  V    KS L D+ L  +  
Sbjct: 184 QPVIRKTKNWYLPLNNYQKWLKQWILEDHKEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L + D    GS  K+W       +
Sbjct: 237 TRDLDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318
           H IGKD + FH + +P  L +     LP  V ++ F+  +  KIS S    +   E +  
Sbjct: 297 HFIGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRD 356

Query: 319 -EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            E   D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++
Sbjct: 357 FEGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D   +     V +++   ++      A  + ++L    ++Y    +PW++ 
Sbjct: 417 PACGELHDVDRQAIQEFKDVKEKVEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+P R  T+L ++++++  L+I  + F+P  + K+  ++ + +
Sbjct: 477 KTDPKRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTE 520


>gi|240013183|ref|ZP_04720096.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
          Length = 684

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 420 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|187476981|ref|YP_785005.1| methionyl-tRNA synthetase [Bordetella avium 197N]
 gi|123752268|sp|Q2KYS4|SYM_BORA1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115421567|emb|CAJ48077.1| methionyl-tRNA synthetase [Bordetella avium 197N]
          Length = 691

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 244/556 (43%), Gaps = 65/556 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+  G
Sbjct: 5   LFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEKEG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--------- 117
           +T +  V + +       D   I +D +  T    +      +++ +   G         
Sbjct: 65  ITPQALVARYAAERPRYLDGFHIRFDHWHSTDSAENVALSHEIYRALKAAGLIETRSIEQ 124

Query: 118 --DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-------------- 161
             D  KG +     ++ E      +   G   +   A + P + ++              
Sbjct: 125 FFDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELIQPYSALTGATPVLKR 184

Query: 162 EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFVK---------SGLKDLSLSR 211
            + +FF+LS  +  + L  + +          ++EV +  +         + L D  +SR
Sbjct: 185 SDHFFFKLSDPRCVEFLQQWTTGSNRNGIKHLQSEVQAKTREWLGGEEGEAKLGDWDISR 244

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTT-TGYLDNP--------DGSKAKFWPADLHV 262
               +GI+IPD P    YVW+DA   YL +   Y D          D S A      +H 
Sbjct: 245 DAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCDKIGLDFDALLDPSSAT---EQVHF 301

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IGKDI+ FHA++WPA L  A    P  +  HGFI   GEK+SKS G  I P+  + EVG+
Sbjct: 302 IGKDIIYFHALFWPAMLKFAGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYL-EVGM 360

Query: 323 DA--LRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           D   LRY++  ++ A  +D  ++ +    RVN+DL     N+ SR+ + I + ++G +  
Sbjct: 361 DPEWLRYYMAAKLNARVEDMDFNPEDFIARVNSDLVGKYVNIASRAANFITRHFEGKL-- 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438
             A+     ++ +  ++  + IR  ++ +  +RA+ ++++    +++ FDA +PW L K 
Sbjct: 419 --AYLGDTAALSAEFAQQTESIRAALEAREFNRAIREIMAYADGINQAFDAAQPWVLAKG 476

Query: 439 -TNPDRA-----STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ---SL 489
               D A       +    +   + L+++L   +P L +++   LF A  +  +     L
Sbjct: 477 FAEADEARRAQLQDICSRALAGFKALSVMLAPVLPALTSRVARDLFGAQRDFIWSDAADL 536

Query: 490 DQRLKPGFMLHKTFDP 505
             ++ P   L +  DP
Sbjct: 537 PAQVAPFKHLMQRVDP 552


>gi|268602591|ref|ZP_06136758.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268586722|gb|EEZ51398.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 684

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 420 -----SGSALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|268595679|ref|ZP_06129846.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268549068|gb|EEZ44486.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 700

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 376 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 435

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 436 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|325268659|ref|ZP_08135289.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989187|gb|EGC21140.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 712

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 238/520 (45%), Gaps = 43/520 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 29  KKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVPITI 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +   D+  +  +D  +   IS+D + RTT   H+      ++K+ D G + 
Sbjct: 89  RAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDGKLV 148

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWM--- 160
           +     +Y      +  D     E     +   Y  Q              NP   +   
Sbjct: 149 EKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGS 208

Query: 161 -----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                + + ++  L+ YQ+ L  +  + H E+   +    +  S++   L+  +++R   
Sbjct: 209 QPVIRKTKNWYLPLNNYQEWLKQWILKDHKEWRPNV--YGQCKSWLDMDLQPRAMTRD-L 265

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----LHVIG 264
           DWGI +P +     ++YVW DA   Y++ T  L + D    GS  K+W       +H IG
Sbjct: 266 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHFIG 325

Query: 265 KDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--EVG 321
           KD + FH + +P  L +     LP  V ++ F+  +  KIS S    +   E +   E  
Sbjct: 326 KDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFEGK 385

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P  G
Sbjct: 386 QDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPACG 445

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D   +     V +++   ++      A  + ++L    ++Y    +PW++ KT+P
Sbjct: 446 ELHDVDRQTIQEFKDVKEKVEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKTDP 505

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R  T+L ++++++  L+I  + F+P  + K+  ++ + +
Sbjct: 506 KRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTE 545


>gi|227830547|ref|YP_002832327.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579360|ref|YP_002837758.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581880|ref|YP_002840279.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|238620010|ref|YP_002914836.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|227456995|gb|ACP35682.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010074|gb|ACP45836.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012596|gb|ACP48357.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|238381080|gb|ACR42168.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 631

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 251/522 (48%), Gaps = 54/522 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 60  KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    +  
Sbjct: 120 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 179

Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157
                             KG   Y G+   R +   N  ++   +   + +       P+
Sbjct: 180 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 239

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + +K+ S+  S  E  +P   ++  + +V  GLK  S++R    WG
Sbjct: 240 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 295

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266
           I  P    +D    +YVW +AL  Y++         G   K   +W ++     + IGKD
Sbjct: 296 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 353

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FH +  PA L+++     LP  + +  ++L++G+K SKS  +G  ID  E  E + V
Sbjct: 354 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 411

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           +  R+ L+R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P    
Sbjct: 412 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 471

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  ++D+ I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K  
Sbjct: 472 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 531

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +   +  LY+ V  ++ +AILL   +P  A +I+D+L + +
Sbjct: 532 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 573


>gi|229523177|ref|ZP_04412584.1| methionyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339540|gb|EEO04555.1| methionyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 658

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 211/483 (43%), Gaps = 46/483 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S    RD A 
Sbjct: 3   EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144
             DIS+D++  T    + +    ++ ++   G I     S  +    E +  D  V KG 
Sbjct: 63  -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120

Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179
                          A G+ Y+     NP   +        + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   ++    D    + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +DG +    A  E          R    I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADR----IAELFETREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANK 472
           A +
Sbjct: 474 AER 476


>gi|284998042|ref|YP_003419809.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5]
 gi|284445937|gb|ADB87439.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5]
          Length = 585

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 251/522 (48%), Gaps = 54/522 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 14  KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    +  
Sbjct: 74  IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 133

Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157
                             KG   Y G+   R +   N  ++   +   + +       P+
Sbjct: 134 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 193

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + +K+ S+  S  E  +P   ++  + +V  GLK  S++R    WG
Sbjct: 194 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 249

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266
           I  P    +D    +YVW +AL  Y++         G   K   +W ++     + IGKD
Sbjct: 250 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 307

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FH +  PA L+++     LP  + +  ++L++G+K SKS  +G  ID  E  E + V
Sbjct: 308 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 365

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           +  R+ L+R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P    
Sbjct: 366 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  ++D+ I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K  
Sbjct: 426 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 485

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +   +  LY+ V  ++ +AILL   +P  A +I+D+L + +
Sbjct: 486 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 527


>gi|256370611|ref|YP_003108436.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009403|gb|ACU52763.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 553

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 243/532 (45%), Gaps = 52/532 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A+ Y N   HIGH   + + AD+  R+ + +G +V+F +GTDEHG  I   A+  G+
Sbjct: 8   VTAALPYANGPIHIGHLSGVYLPADIFVRYLKSNGKNVIFISGTDEHGVPITIKAKEEGL 67

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  V++     ++    + I +D+F RTT K H  T    +K +S K  +++     +
Sbjct: 68  SPQELVNKYHSLIKNSLKKMGILFDNFSRTTSKIHFKTSIKFFKILSKKKILFEKESEHY 127

Query: 128 YSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           +  + + +  D  +        YK A G   +      +P + +    +F        K 
Sbjct: 128 FDKKVKKFLPDRYIRGICPKCSYKAAYGDQCEKCGGSISPEELINPYSFFTGKKPILKKT 187

Query: 177 LSYYESHPEFILPIER------------------RNEVISFVKSGLKDLSLSRKTFDWGI 218
             +Y       LP+ +                    ++ +++K GLK  +++R   +WGI
Sbjct: 188 KHWY-------LPLNKYQNFLEKWIKTKKFKKNVSGQIKAWLKEGLKPRAITR-DLNWGI 239

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW----PADLHVIGKDILRFH 271
            +P  ++   ++YVW +A   Y+++T       G    K+W     A ++ IGKD + FH
Sbjct: 240 PLPIKNNTGKVLYVWFEAPIGYISSTIEWGLKTGKNWEKYWKNKNTAIINFIGKDNIVFH 299

Query: 272 AIYWPAFL-LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYF 328
            I +P  L +     LP  V ++ F+  + +KIS S    +   E +E+     D LRY 
Sbjct: 300 GIIFPIMLKVHGEYILPYNVPANEFLNIEKKKISTSKKWAVWLHEYLEDFPKKEDVLRYV 359

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L   +   KD  +     KK+ N++L + +GN  +R V +  K ++G +P+P  F   D 
Sbjct: 360 LTSNMPETKDTNFSWQNFKKKNNSELVSILGNYFNRVVVLTKKLFNGKVPSPEKFKTKDF 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            IL    +   +I   ++      AL   + L    ++Y   ++PW   K N  R  T++
Sbjct: 420 FILKFLKKCPLKIGGFIEKYHFKDALMTFMELARLGNKYLTDEEPW---KINKKRVKTII 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLKPGFML 499
           Y++ +++  +  L   F+P  ++KI  +L +   N +     ++ + PG +L
Sbjct: 477 YISFQIMGVIGNLSNPFLPFTSSKILKMLSLKQLNWQLLLKTNEIVTPGLLL 528


>gi|239999868|ref|ZP_04719792.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240015623|ref|ZP_04722163.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 684

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +   
Sbjct: 360 PEWMRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 420 -----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|21672394|ref|NP_660461.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654289|sp|Q9ZHD7|SYM_BUCAP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21623001|gb|AAM67672.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 545

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 230/503 (45%), Gaps = 44/503 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+   +V F +  D HG  I   ++ 
Sbjct: 6   KKILVTCALPYANGPIHIGHMLEHIQADIWVRYQRMRNNEVWFISSDDAHGTAIMLKSEK 65

Query: 65  AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+T  K+       +  D ++  +IS+D++  T    +    R ++  +S++  I +  
Sbjct: 66  LGITPIKLIKKIKEEHIIDFSN-FNISHDNYHSTHCVENLFLLRKIFLSLSEQKLINEKK 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD----------------GQYYNAQH--NPVQWMEEE-- 163
              +Y    +  +  D   KG                  G  Y      NP+  +     
Sbjct: 125 IFQFYD-NTKKMFLPDRFIKGTCPFCSSKNQNGDNCEICGSIYEPTDLVNPISVISNSVP 183

Query: 164 ------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                   +F L  + + L  +  S    IL      +   ++KSGLK+  +SR    +G
Sbjct: 184 ILKNTTHLYFNLPLFTNMLNKWIHSG---ILEKSVAKKTEEWLKSGLKEWGISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILRF 270
            KIP   +   YVW+DA   Y++        N      +FW  +      H IGKDI+ F
Sbjct: 241 FKIPKFDKKYFYVWLDAPVGYISAFKNFCTKNKKVDFNEFWKKESKCELYHFIGKDIIYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L +++   P  +F HG +   G K+SKS G +I   + I+    D+LRY+  
Sbjct: 301 HTLFWPAILEASSYRKPNGIFVHGHLTINGLKLSKSRGFLIKASDWIKCFDSDSLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +++N+D+ N + NL SR+ S I K +DG +    A +  D +
Sbjct: 361 SKLSNNINDIEINLEDFIQKINSDIVNKLVNLASRNASFIHKYFDGYL----ADSLGDCN 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + ++I    +N+     + + + L+   ++Y + ++PW++K+ N ++  T+  
Sbjct: 417 LYQDFIDISKKIANFFENRQFSSVIRECMKLLDLANQYINQREPWKIKQDNFNKLHTICT 476

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
           V + + R + I L+  +P LA K
Sbjct: 477 VGINLFRLVVIFLKPIIPDLAKK 499


>gi|229529874|ref|ZP_04419264.1| methionyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333648|gb|EEN99134.1| methionyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 658

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 50/485 (10%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S    RD A 
Sbjct: 3   EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144
             DIS+D++  T    + +    ++ ++   G I     S  +    E +  D  V KG 
Sbjct: 63  -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120

Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179
                          A G+ Y+     NP   +        + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   ++    D    + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQNQL 409
           AD+ N I NL SR+   I K +DG +    A  E          R+ +  E RE      
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADRIAELFEARE------ 411

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467
             RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L   L+  +P
Sbjct: 412 FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP 471

Query: 468 KLANK 472
            LA +
Sbjct: 472 ALAER 476


>gi|238020730|ref|ZP_04601156.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147]
 gi|237867710|gb|EEP68716.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147]
          Length = 688

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 231/539 (42%), Gaps = 51/539 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I  
Sbjct: 1   MTSKRKILVTSALPYANGAIHLGHMVEHIQTDIWVRFQKSRGHECYYCCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T +  + +             I YD++  T    +      +++ +   G I 
Sbjct: 61  AAEKQGITPEQLIAKTHGEHLADFTGFGIGYDNYYSTHSPENQTLSEQIYRSLKANGKII 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY-------------------YNAQHN 155
               +  +    + +  D  V KG      A  QY                   Y+A   
Sbjct: 121 SKTINQLFDPEKQMFLPDRFV-KGECPKCHAQDQYGDNCEVCGTTYAPTELIKPYSAVSG 179

Query: 156 PVQWMEE-EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSR 211
               M+E E +FF+LS   D L  +   E++    L  E  N++  ++K G L D  +SR
Sbjct: 180 ATPVMKETEHFFFKLSDCGDYLKQWTAGETNGRAHLQPEALNKMNEWLKEGELSDWDISR 239

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +   L    G    +F+  D      H IGK
Sbjct: 240 DAPYFGFQIPDAPNKYFYVWLDAPVGYMASFQNLCARKGLDFNEFFGKDSQTELYHFIGK 299

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++W A L  +    P  +F+HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 300 DILYFHALFWTAMLEYSGHRAPSGIFAHGFLTVDGQKMSKSRGTFITARSYLEQGLNPEW 359

Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  ++    +D   +      RVN+DL     N+ +R+   I K + G +      
Sbjct: 360 MRYYIAAKLNSKIEDIDLNLQDFIARVNSDLVGKYVNIAARAAGFIHKRFSGCLKDV--- 416

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-- 441
             S   I+   +   + I    + +   +AL +++ L   V+ Y D  KPWEL K     
Sbjct: 417 --SGSEIVKHLAAESERIASLYEEREYGKALREIMILADVVNEYVDENKPWELAKLEGAD 474

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKP 495
            R   V    +   + L + L   +P++A +  + L +     AD +R   S +  +KP
Sbjct: 475 SRLHKVCSELINAFKILTVYLSPVLPRVAEQAAEFLGLEKLVWADASRTL-SENHVIKP 532


>gi|156937943|ref|YP_001435739.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|187647728|sp|A8ABN0|SYM_IGNH4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|156566927|gb|ABU82332.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 561

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 234/513 (45%), Gaps = 53/513 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  + +A  Y N  PH+G+    ++ ADV ARF RL G DV+F +G+DEHG  I   A+ 
Sbjct: 3   KWIVGSAWPYVNTVPHLGNLIGSVLSADVFARFLRLMGEDVVFVSGSDEHGTPIEVEARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  K   D+     + + +   IS+D++ RT    H +  R  + KI + G I+    
Sbjct: 63  RGVEPKELTDKVHEYVKKLFEKYLISFDNYTRTHNPVHMEFVRETFMKIYENGYIFTQEM 122

Query: 125 SGWYSLRDEAYYNDDEV-----YKGA---------------------DGQYYNAQHNPVQ 158
              Y  +D+ +  D        Y GA                     + +       PV 
Sbjct: 123 VMPYCPKDKMFLPDRFTVGTCPYCGAPDARGDQCERCGKLLDPPDLVNPRCAFCGSRPV- 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W +   +FF L    + L+ + E      LP   +   +++VK GL   S++R    WGI
Sbjct: 182 WRKTLHWFFDLPKAAEGLVEWLERSE---LPNNVKKFTLNWVKEGLTPRSVTRDN-KWGI 237

Query: 219 K--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFW----PADLHVIGKDILRF 270
               P      +YVW +A+  YL+    LD  +G+    +FW       ++ IGKD + F
Sbjct: 238 PAPFPGAEGKTIYVWFEAVLGYLSAVKELDVKNGTNLFEEFWKDINSRPVYFIGKDNIPF 297

Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEV-GVDAL 325
           H+I  PA L +     PLP  + +  +++++G+K SK   +G  ID  E +E V   D  
Sbjct: 298 HSIILPALLKATGEEYPLPYNISATEYLMYEGQKFSKRRRVGVWID--EALEVVPNPDYW 355

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ L+R     +D  +      + VN++L + IGN   R ++ + + + G +        
Sbjct: 356 RFALIRMRPEERDTNFTWREFYRIVNSELNDDIGNFAHRVLTFVERRFGGSV-----RGR 410

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA 444
            DE +    + + ++  + M    +  A   V+ +    ++Y + ++PW L K+   + A
Sbjct: 411 VDEEVKKSIAELHEKYVKAMYKVKLKEASGLVLEMARLGNKYLNEKEPWRLLKEGKEEEA 470

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V+Y  + ++R++A+ L  F P  A +++ ++
Sbjct: 471 RDVMYTCLFILREVALHLAPFAPSAAEELWKMI 503


>gi|121633907|ref|YP_974152.1| methionyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|187647737|sp|A1KR57|SYM_NEIMF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120865613|emb|CAM09333.1| methionyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 685

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 218/511 (42%), Gaps = 52/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + +            +I YD++  T    +    + +++ +     I      
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANDKIESRVIE 123

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
             +    + +  D  V             G + +     ++P + +              
Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPELR 183

Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210
           E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +S
Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H IG
Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  +
Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +     
Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV-- 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
              SD ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K    
Sbjct: 420 ---SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQ 476

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            +R   V    +     L   L   +P+ A 
Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTAT 507


>gi|313127143|ref|YP_004037413.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293508|gb|ADQ67968.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 688

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 227/510 (44%), Gaps = 58/510 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D+ +R  +  G +  F +G+D HG  +A  A+  GVT
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDIYSRALKRLGQETAFVSGSDMHGTPVAVNAEKEGVT 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  ++   +++     +I +D++  T ++ + +  + L + + D+G +YK      Y
Sbjct: 74  PESFALRHHEKYKETFPKFEIEFDNYGHTHDETNTELTQELVRTLEDEGYVYKKQIPVAY 133

Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQH----------NPVQWMEE 162
               + +  D                DE  +G  G++               NP ++ + 
Sbjct: 134 DPDADQWLPDRYVEGTCPYCGEHARGDECDEGC-GRHLEPGEIEDPVSAITGNPAEYRDR 192

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGI 218
              FFR++  Q+ L        EFI  +E     +N+   +++  L+D  ++R   DWGI
Sbjct: 193 NHRFFRVTELQEYL-------QEFIDRLEGTSNAQNQPREWIEGELQDWCITRD-MDWGI 244

Query: 219 KIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD---LHVIGKDILR 269
             P + +   ++YVW+DA   Y+++T       G+      K W      +H+IG+DI++
Sbjct: 245 DYPGETEDDLVLYVWVDAPIEYISSTKQYTERAGADTFDWEKAWKESGDIVHIIGRDIIQ 304

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327
            H ++WPA L + +   P+ V + GFI   G+  S S    +   E ++E G D   +RY
Sbjct: 305 HHTVFWPAMLRATDHVEPRAVMASGFITLNGKGFSTSRNRAVWADEYLDE-GFDPALIRY 363

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L       +D  +  +  + RVN +L   +GN + RS+    ++Y+G  P      E  
Sbjct: 364 YLATNGGFQQDVDFSWEKFRNRVNNELVGTVGNFLYRSLLFAHREYEGT-PDADLSAEVK 422

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           E I       ++E    + +  +      V+ L    + Y    +PW+L      R   V
Sbjct: 423 ERIYD----AIEEFEAGVNDYSVREVGNSVVRLAQFGNEYIQGHEPWKLDDGAEKR--QV 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   V++ + +A+L +   P  A K++D L
Sbjct: 477 IRDCVQIAKAIAVLFEPVAPGKAEKLWDDL 506


>gi|229505369|ref|ZP_04394879.1| methionyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510961|ref|ZP_04400440.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518082|ref|ZP_04407526.1| methionyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608388|ref|YP_002879036.1| methionyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|229344797|gb|EEO09771.1| methionyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229350926|gb|EEO15867.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357592|gb|EEO22509.1| methionyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371043|gb|ACQ61466.1| methionyl-tRNA synthetase [Vibrio cholerae MJ-1236]
          Length = 658

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 50/485 (10%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S    RD A 
Sbjct: 3   EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144
             DIS+D++  T    + +    ++ ++   G I     S  +    E +  D  V KG 
Sbjct: 63  -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120

Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179
                          A G+ Y+     NP   +        + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   ++    D    + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQNQL 409
           AD+ N I NL SR+   I K +DG +    A  E          R+ +  E RE      
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADRIAELFEARE------ 411

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467
             RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L   L+  +P
Sbjct: 412 FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP 471

Query: 468 KLANK 472
            LA +
Sbjct: 472 ALAER 476


>gi|323474905|gb|ADX85511.1| methionyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477646|gb|ADX82884.1| methionyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 573

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 251/522 (48%), Gaps = 54/522 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 2   KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    +  
Sbjct: 62  IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 121

Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157
                             KG   Y G+   R +   N  ++   +   + +       P+
Sbjct: 122 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + +K+ S+  S  E  +P   ++  + +V  GLK  S++R    WG
Sbjct: 182 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 237

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266
           I  P    +D    +YVW +AL  Y++         G   K   +W ++     + IGKD
Sbjct: 238 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 295

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FH +  PA L+++     LP  + +  ++L++G+K SKS  +G  ID  E  E + V
Sbjct: 296 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 353

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           +  R+ L+R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P    
Sbjct: 354 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 413

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  ++D+ I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K  
Sbjct: 414 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 473

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +   +  LY+ V  ++ +AILL   +P  A +I+D+L + +
Sbjct: 474 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 515


>gi|16082174|ref|NP_394618.1| methionyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|25009396|sp|Q9HJ12|SYM_THEAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10640473|emb|CAC12287.1| probable methionyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 547

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 241/515 (46%), Gaps = 57/515 (11%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ ++ A+ Y N   HIGH A   + ADV  R++RL G  VL+ +G+DE+G  I   A+ 
Sbjct: 5   KILVNCALPYANGPLHIGHIAGAYLGADVFVRYNRLMGNQVLYVSGSDEYGTPITVRAEK 64

Query: 65  AGVTTK----VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            G + K    ++ +++ R F +    L IS+D F+RTT   H +  +  + K+ ++G I 
Sbjct: 65  EGRSPKEIADIYYEEHLRTFEN----LGISFDIFMRTTWPEHSENAQDFFIKLLNEGYIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME-------- 161
           KG     +  +   +  D  +        Y  A G Q  N     +P   ++        
Sbjct: 121 KGTMIAPFCRKIGRFMPDRYIEGTCPYCHYPKARGDQCDNCGRTLDPQDLIDPKCILSGE 180

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                E  +FF      +  L  + S   F  P      V+++    +  GLK   ++R 
Sbjct: 181 TPEFRETEHFFLRLDLLEDRLKSWISSKNFWKP-----NVLAYTQNFISGGLKKRPITRD 235

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTT----TGYLDNPDGSKAKFWPADL---HVI 263
             DWG+KIP D      +YVW +AL  Y+T     +    NPD  K  +   ++   + I
Sbjct: 236 -IDWGVKIPLDGYDSKRIYVWFEALIGYITGAKEYSKRTGNPDLWKEYYMDPEVRNYYFI 294

Query: 264 GKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           GKD + FHAI WPA L+      LP  + ++ ++  KG++ SKS G      ++++ V  
Sbjct: 295 GKDNIPFHAIIWPAMLMGYGGFNLPYDIPANEYLTFKGQQFSKSRGIGYSVDDLLKAVPA 354

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY++   +    D  +  + L   VN+DL +  GNLV R +S +  D   + P P  
Sbjct: 355 DYLRYYVASILPETGDSDFSLEELVNTVNSDLIDKYGNLVYRILSFM--DRYSINPDPVD 412

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +  +E       R  +   E++    + R L + + L    + +F+  +PW+  K +  
Sbjct: 413 VSGDEE--FKYAQRSFELWSEDLSGVHVKRGLLRWLDLAIYANGFFNRSEPWKTIKNDRQ 470

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +  LY+++++   L +++  ++P  A KI+++L
Sbjct: 471 KLNHDLYLSLKITEVLTVMVYPYIPSSAEKIWNML 505


>gi|229515418|ref|ZP_04404877.1| methionyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347187|gb|EEO12147.1| methionyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 658

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 50/485 (10%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF-RDMAD 85
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S    RD A 
Sbjct: 3   EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDFAG 62

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG- 144
             DIS+D++  T    + +    ++ ++   G I     S  +    E +  D  V KG 
Sbjct: 63  -FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGT 120

Query: 145 ---------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSY 179
                          A G+ Y+     NP   +        + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   ++    D    + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQNQL 409
           AD+ N I NL SR+   I K +DG +    A  E          R+ +  E RE      
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFAGAADRIAELFEARE------ 411

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467
             RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L   L+  +P
Sbjct: 412 FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP 471

Query: 468 KLANK 472
            LA +
Sbjct: 472 ALAER 476


>gi|218767290|ref|YP_002341802.1| methionyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|25009400|sp|Q9JWP0|SYM_NEIMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121051298|emb|CAM07582.1| methionyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 685

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 222/508 (43%), Gaps = 53/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D  +L+  +   + I E  +++   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSELLAKLTAQSEAIAECYESREYARALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
             A  +  V  E+I    +L     P L
Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502


>gi|156975200|ref|YP_001446107.1| methionyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156526794|gb|ABU71880.1| hypothetical protein VIBHAR_02927 [Vibrio harveyi ATCC BAA-1116]
          Length = 661

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 212/484 (43%), Gaps = 48/484 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +     
Sbjct: 3   EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQKDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144
            DIS+D++  T  + + +    ++ ++   G I     S  +    E +  D  V KG  
Sbjct: 63  FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121

Query: 145 ----ADGQYYNAQHN------PVQWME--------------EEGYFFRLSAYQDKLLSYY 180
               ++ QY +   N      P + ++               E +FF L  ++  L  + 
Sbjct: 122 PKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMKDSEHFFFDLPQFESMLKEWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+ 
Sbjct: 182 RSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEENKFFYVWLDAPVGYMA 238

Query: 241 TTGYL-DNPDGSK-AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   L D  +G    ++W  D      H IGKDI+ FH+++WPA L  +    P  VF H
Sbjct: 239 SFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVH 298

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352
           G++   G K+SKS G  +     ++ +  + LRY+   ++    D    + +   +RVNA
Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNA 358

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410
           D+ N I NL SR+   I K ++G +    A  E     ++   R+  L E RE       
Sbjct: 359 DVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFVAAADRIAELYETRE------F 412

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P 
Sbjct: 413 GRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKPVMPA 472

Query: 469 LANK 472
           LA +
Sbjct: 473 LAAR 476


>gi|313205891|ref|YP_004045068.1| methionyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445207|gb|ADQ81562.1| methionyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022203|gb|EFT35231.1| methionyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336669|gb|ADZ12943.1| EMAP domain [Riemerella anatipestifer RA-GD]
          Length = 677

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 236/510 (46%), Gaps = 43/510 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I+ A+ Y N   HIGH A   I ADV ARF R  G +V F  G+DEHG  I   A+
Sbjct: 3   ERKLITAALPYANGPVHIGHLAGVYIPADVYARFQRRTGKEVAFICGSDEHGIPITIRAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+     +   + L IS+D++ RTT  +H++T    + K+ + G   +  
Sbjct: 63  KEGVTPQDIVDKYHLIIKKSFEDLGISFDEYSRTTSAKHYETASEFFLKMYENGKFTEEV 122

Query: 124 YSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWME----- 161
              +Y  +   +  D  +     K ++   Y  Q              NP   +      
Sbjct: 123 SEQFYDEQAGEFLADRYIVGTCPKCSNNNAYGDQCEKCGSTLSPTELLNPKSMLSGNSPV 182

Query: 162 ---EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               + ++  L+ Y+  L  +  E H     P     +V S++  GLK  +++R   +WG
Sbjct: 183 LKPTKNWYLPLNEYEGFLNQWIIEGHQHDWKP-NVYGQVKSWLNEGLKPRAMTRD-LNWG 240

Query: 218 IKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           + +P  D    ++YVW DA   Y++ T  + +  +     +W ++    +H IGKD + F
Sbjct: 241 VPVPLPDAEGKVLYVWFDAPIGYISFTKEWAEKNNKDWKDYWQSENSDLVHFIGKDNIVF 300

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +P+ + +  +  +P  V +  F+  + +KIS S    +   E + +     D LRY
Sbjct: 301 HCIIFPSMMKAHGDYIMPNNVPAFEFLNLENDKISTSRNWAVWAHEYVADFPGQQDVLRY 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+      KD  +     + + N++L   +GN ++R   +  K Y+G +P       ++
Sbjct: 361 ALLSSAPETKDNNFTWKEFQTKNNSELVGILGNFINRVAVLTHKYYNGRVPK----GNTN 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            + L   ++   EI++ ++      AL+ +++L    ++Y   ++PW+  KT+  + +  
Sbjct: 417 ATELEEINKAATEIKDYLEKFEFRNALSALMNLARFGNQYLQTEEPWKTIKTDEAKTANT 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L++  ++   LA L + F+P  + K+ ++ 
Sbjct: 477 LFIGTQIAIALAQLSEPFMPFSSEKLLNMF 506


>gi|15897480|ref|NP_342085.1| methionyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174797|ref|ZP_06388766.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|25009409|sp|Q9UWW2|SYM_SULSO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|6015914|emb|CAB57741.1| methionyl-trna synthetase [Sulfolobus solfataricus P2]
 gi|13813723|gb|AAK40875.1| Methionyl-tRNA synthetase (metS) [Sulfolobus solfataricus P2]
 gi|261602240|gb|ACX91843.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 573

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 246/520 (47%), Gaps = 50/520 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAA 62
           K+ ++ A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 2   KVLVTAAWPYVNSVPHLGNLIGSILSADVFARYARLRYGKENVLFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKIS------- 114
               V  K   DQ     R +  +V  IS+D++ RT  + H    R    K++       
Sbjct: 62  IKRKVNPKELTDQAHEYDRHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYIKVSE 121

Query: 115 ------DKGDIY------KGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157
                 +   +Y      KG   Y G+   R +   N  ++   +   + +       PV
Sbjct: 122 DEIPYCENDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKTPV 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + DK+  +  S  E  +P   ++  +S+V  GLK  S++R    WG
Sbjct: 182 -FKKTKHWFFDLSEFNDKIRGWISSSNE--MPDNVKSVALSWVGEGLKPRSITRDN-KWG 237

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWP--ADLHVIGKDIL 268
           I  P +      +YVW +AL  Y++         G + K     F P     + IGKD +
Sbjct: 238 IPAPFEGAQDKSIYVWFEALLGYISAVIEYFERKGDQEKWKEYWFGPNIKSYYFIGKDNI 297

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDA 324
            FHA+  PA L+++     LP  + +  ++L++G+K SKS  +G  ID  E  E + V+ 
Sbjct: 298 PFHAVILPAMLMASEEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDVEY 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGA 382
            R+ L+R     KD  +      + VN +L + IGN V+R +SM+ + Y G++P      
Sbjct: 356 WRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRVLSMVNRYYSGIVPEFKIDI 415

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             ++D  I+S+ +   + + +  +   +     +++  V E + Y + + PW+L K+  +
Sbjct: 416 LDDNDRKIISLINETPKVVGDLFEKGKLKAGTEEMLKFVRECNAYLNMKAPWDLYKSGKE 475

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 LY+    ++ +AILL   +P  A KI+++L + +
Sbjct: 476 IELKNTLYIGTNSVKTIAILLYPLMPSHAQKIYEMLNMGN 515


>gi|319638779|ref|ZP_07993538.1| methionyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400020|gb|EFV80682.1| methionyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 685

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 223/518 (43%), Gaps = 54/518 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +      +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSEQIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 KQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +R   V    +     L   L   +PK+A      L
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513


>gi|325129190|gb|EGC52035.1| methionyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 685

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 222/517 (42%), Gaps = 52/517 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  + +            +I YD++  T    +    + +++ +   G I      
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKTGGKIESRVIE 123

Query: 126 GWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------------- 160
             +    + +  D  V             G + +     ++P + +              
Sbjct: 124 QLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPELR 183

Query: 161 EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSLS 210
           E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +S
Sbjct: 184 ESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDIS 241

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H IG
Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  +
Sbjct: 302 KDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPE 361

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +     
Sbjct: 362 WMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV-- 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
              +D ++L+  +     I E  +++   +AL  +++L   V+ Y DA KPWEL K    
Sbjct: 420 ---ADSALLAKLAAESDTIAEQYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQ 476

Query: 443 --RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             R   V    +     L   L   +PK+A      L
Sbjct: 477 DARLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513


>gi|325133228|gb|EGC55897.1| methionyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139263|gb|EGC61807.1| methionyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 684

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 223/508 (43%), Gaps = 53/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D  D   I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTD-FGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++  +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFESRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
             A  +  V  E+I    +L     P L
Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502


>gi|145591530|ref|YP_001153532.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|187647757|sp|A4WKG3|SYM_PYRAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145283298|gb|ABP50880.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 570

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 232/514 (45%), Gaps = 44/514 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  + +A  Y    PH+G+    ++ ADV AR+ RL G +V+F +G+D HG  I   A  
Sbjct: 3   KYVVGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHEVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +  +   ++    DIS+D +  T  + H    +  + ++ + G I+    
Sbjct: 63  LGVDPADYALKMHQIVAELFRRWDISFDLYTHTHSETHIKFVQEFFARVYENGFIFTRDD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159
              Y  RD+ Y  D  V        Y+ A G Q  N     +P Q              W
Sbjct: 123 EVPYCPRDKIYLPDRFVIGKCPYCGYERARGDQCENCGRLLDPKQLIEPRCAVCGSKPEW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                ++  L   +D++  Y E +P   LP+  +   ++ +K G++  +++R    WGI 
Sbjct: 183 RVTRHWYLDLRRLEDRIRKYVEGNPH--LPLNAKEMSLAMLKEGMRPRAITRDN-KWGIP 239

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW----PADLHVIGKDILRF 270
              P      +YVW +A+  Y++         G +    +FW       +  +GKD + F
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEYFKKLGREEEWKRFWLDQETKVVFFVGKDNVPF 299

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326
           H I  PA L+++  N  +P    S  ++L++G+K SKS   G  ID  E +  +  D  R
Sbjct: 300 HVIILPALLMASGENYVMPTTTASTEYLLYEGDKFSKSRRWGIWID--EALHLLPTDYWR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + LV      +D  +      + +N  L + +GN  +R +S I     G +P PG  +  
Sbjct: 358 FVLVYIRPENRDTSFTWQTALEVINKVLNDDVGNYANRVLSFIKSRMGGAVPPPGKPSPE 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           DE  +S  +++ Q+   +     +  A+  V+ +  E ++Y +A+ PWEL K + + A+ 
Sbjct: 418 DEEFISKVAQLFQKAEAHYDAIELKEAVHTVVEIAREGNKYLNARAPWELAKKDAEAANA 477

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VLY     ++ LA  L   VP+ A  ++ ++ ++
Sbjct: 478 VLYRAFWSLKYLAAGLAPVVPRSAETLWAMMGIS 511


>gi|229585107|ref|YP_002843609.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228020157|gb|ACP55564.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 631

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 249/518 (48%), Gaps = 54/518 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 60  KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    +  
Sbjct: 120 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYVKVSE 179

Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157
                             KG   Y G+   R +   N  ++   +   + +       P+
Sbjct: 180 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 239

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + +K+ S+  S  E  +P   ++  + +V  GLK  S++R    WG
Sbjct: 240 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 295

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266
           I  P    +D    +YVW +AL  Y++         G   K   +W ++     + IGKD
Sbjct: 296 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 353

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FH +  PA L+++     LP  + +  ++L++G+K SKS  +G  ID  E  E + V
Sbjct: 354 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 411

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           +  R+ L+R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P    
Sbjct: 412 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 471

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  ++D+ I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K  
Sbjct: 472 DALDDNDKKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 531

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   +  LY+ V  ++ +AILL   +P  A +I+D+L
Sbjct: 532 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDML 569


>gi|325135247|gb|EGC57870.1| methionyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 685

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 222/518 (42%), Gaps = 54/518 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLDECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +R   V    +     L   L   +PK+A      L
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513


>gi|293397921|ref|ZP_06642127.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611867|gb|EFF40936.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 719

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 39  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 99  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 216

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 274

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 334

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394

Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            + +RY++  ++  GK  D   +      RVN+DL     N+ +R+   I K ++G    
Sbjct: 395 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 450

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P   + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K 
Sbjct: 451 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 508

Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               +R   V    +     L   L   +P+ A
Sbjct: 509 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541


>gi|59802352|ref|YP_209064.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|68565958|sp|Q5F585|SYM_NEIG1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|59719247|gb|AAW90652.1| putative methionyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 684

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            + +RY++  ++  GK  D   +      RVN+DL     N+ +R+   I K ++G    
Sbjct: 360 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 415

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P   + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K 
Sbjct: 416 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 473

Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               +R   V    +     L   L   +P+ A
Sbjct: 474 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|240122554|ref|ZP_04735510.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268681142|ref|ZP_06148004.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621426|gb|EEZ53826.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 684

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            + +RY++  ++  GK  D   +      RVN+DL     N+ +R+   I K ++G    
Sbjct: 360 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 415

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P   + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K 
Sbjct: 416 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 473

Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               +R   V    +     L   L   +P+ A
Sbjct: 474 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|114798101|ref|YP_760532.1| methionyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123028005|sp|Q0C161|SYM_HYPNA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114738275|gb|ABI76400.1| methionyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 579

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 231/534 (43%), Gaps = 56/534 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ++ ++ I++A+ Y N   H+G+ A  M+ ADV AR  RL G DV +   TDEHG    
Sbjct: 1   MTQQRRILITSALPYINGVKHLGNLAGSMLPADVYARVMRLQGHDVTYICATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AAQ  G + + + D+     R   +  ++S+D F RT+   +H   + L +++   G I
Sbjct: 61  LAAQATGQSVQAYCDEQYEVQRKAGEGFNLSFDWFGRTSRPANHTLTQHLAQQLEKNGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP------ 156
                   Y++ D  +  D  V        Y+ A G Q  N           NP      
Sbjct: 121 EVRTSKQVYAVDDGRFLPDRYVEGTCPHCGYEKARGDQCDNCGRLLDPVDLINPYSAVSG 180

Query: 157 ---VQWMEEEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSL 209
              ++  + +  +   +  QD++  +  +     P   + I  +     ++  GL   S+
Sbjct: 181 SRNIEIRDTDHLYLLQTGMQDRIRDWVNAKGKNWPSLAVSIANK-----WLDEGLIARSI 235

Query: 210 SRKTFDWGIKIPD---DPQ-----YIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD- 259
           SR    WG+K+ D   +P+      + YVW DA   Y++ T       G+   K W  D 
Sbjct: 236 SRD-LSWGVKVTDADGNPRPGFENKVFYVWFDAPIGYISATQEWAEATGNDWEKLWLTDK 294

Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNV 310
                  +  +GKD + FH + +P  LL +  P     K+ +  ++   G K S S    
Sbjct: 295 GADQTEYVQFMGKDNVAFHTVSFPVTLLGSGEPWKTVDKLKAFNWVTWYGGKFSTSQKRG 354

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +   + +  +  D  R++L+     G D  +  +G +  VN+DLAN +GN ++R      
Sbjct: 355 VFMDQALSLLPSDYWRWYLISNAPEGSDAAFTWEGFQAAVNSDLANVLGNFINRITKYCA 414

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
             ++G IP  G   +++  + +  +  L  + E  +     +A A+  ++ +  + Y   
Sbjct: 415 SKFEGKIPETGTSGDAEAWMANELAERLPRLIEFYEAMEFRKAAAETRAIWAAGNEYLTK 474

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +PW   K + D A+  +   + +     I+ Q  +P  A KI D L + +ENR
Sbjct: 475 AEPWVKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAAKKILDALGIPEENR 528


>gi|311896408|dbj|BAJ28816.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 569

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 45/526 (8%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AAQ AG+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAQEAGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  +     + + D   +S+D F R++  ++ +  + + +++   G I +      
Sbjct: 66  PVAEFCARAHDQQKAIYDGFRLSFDHFGRSSSPQNREITQEIARELQANGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME--------------E 162
           YS+ D  +  D  +        Y  A G Q  N     +P   +E              E
Sbjct: 126 YSVADGRFLPDRYIVGTCPFCGYDKARGDQCENCTRVLDPTDLLEPRSAISGSAELEVRE 185

Query: 163 EGYFFRL-SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             + F L S   D++ ++  +H +   P+   +    ++  GL+D +++R   +WG+ +P
Sbjct: 186 TKHLFLLQSKLTDEVEAWIAAHGD-DWPVLASSIARKWLTEGLQDRAITRD-LEWGVPVP 243

Query: 222 DD--PQY-----IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV-----IGKDI 267
            D  P+      + YVW DA   Y+  T    +  G   + W   AD  V     + KD 
Sbjct: 244 ADTWPELAAEGKVFYVWFDAPIEYIGATREWADATGGDWRSWWYEADDTVRYTEFMAKDN 303

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + FH + +PA LL +  P  K  +   F  + + G K S S    I     +E +  D  
Sbjct: 304 VPFHTVMFPATLLGSRQPWKKVDYVKAFNWLTYYGGKFSTSQKLGIFTDVALELLPADYW 363

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L+       D  +  D     VN DLA+ +GN V+R +S   K +   +P      +
Sbjct: 364 RYYLMANAPESDDSSFTWDLFAATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGAPNGD 423

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           ++ ++    + +L E    +      +A   + +L S  + Y D   PW   KT+P+ A+
Sbjct: 424 AETALGEQIAELLAEYEAQLDALNFRKAAQALRALWSAGNSYLDVTAPWTEIKTDPEAAA 483

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             L   + +I   A+L + F+P  A  I D   +AD+ R + S D+
Sbjct: 484 RTLRTAINLIHLYAVLSEPFIPTAARTIRDSFALADDTRTWVSADE 529


>gi|325145467|gb|EGC67741.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 685

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 222/518 (42%), Gaps = 54/518 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLDECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +R   V    +     L   L   +PK+A      L
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFL 513


>gi|240081768|ref|ZP_04726311.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268597867|ref|ZP_06132034.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268551655|gb|EEZ46674.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 700

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 225/513 (43%), Gaps = 58/513 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACGK--DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            + +RY++  ++  GK  D   +      RVN+DL     N+ +R+   I K ++G    
Sbjct: 376 PEWMRYYIAAKLN-GKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---R 431

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P   + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K 
Sbjct: 432 PKDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQ 489

Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               +R   V    +     L   L   +P+ A
Sbjct: 490 EGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|291044838|ref|ZP_06570547.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011732|gb|EFE03728.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 719

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 39  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 99  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 216

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 274

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H 
Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHF 334

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 395 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 451

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 452 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 509

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 510 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541


>gi|325205130|gb|ADZ00583.1| methionyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 684

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 220/508 (43%), Gaps = 53/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
             A  +  V  E+I    +L     P L
Sbjct: 476 QDAR-LHEVCSELINAFTMLTAYLAPVL 502


>gi|260441474|ref|ZP_05795290.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 700

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 376 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 432

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 433 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|268685620|ref|ZP_06152482.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268625904|gb|EEZ58304.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 684

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGGETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|240127258|ref|ZP_04739919.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 700

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGGETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 376 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 432

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 433 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|241760687|ref|ZP_04758779.1| methionine--tRNA ligase [Neisseria flavescens SK114]
 gi|241318868|gb|EER55394.1| methionine--tRNA ligase [Neisseria flavescens SK114]
          Length = 685

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 221/511 (43%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   + K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFLSKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|47570792|ref|ZP_00241355.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47552540|gb|EAL11028.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 183

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 116/182 (63%), Gaps = 8/182 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND----DEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS++DE +Y +    D + +G     G+  ++ H+ V+ + EE YFFR+  Y D
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHD-VELVREEIYFFRMGKYVD 181

Query: 175 KL 176
           +L
Sbjct: 182 RL 183


>gi|282889857|ref|ZP_06298396.1| hypothetical protein pah_c004o273 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500431|gb|EFB42711.1| hypothetical protein pah_c004o273 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 680

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 225/514 (43%), Gaps = 48/514 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ +++A+ Y N   H GH A   +  D  +RF RL   +VL+  G+DE+G  I  +A+
Sbjct: 3   KKILVTSALPYANGPLHFGHIAGAYLPGDCYSRFQRLQKNNVLYVCGSDEYGVAITMSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T K  VD       ++   L+ S+D + RTT K H +T    +  +   G I +  
Sbjct: 63  LAGRTPKEHVDIFHEVNLNLFKKLNFSFDHYSRTTWKGHAETVHQYFLDLLANGYIEERT 122

Query: 124 YSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEE---- 162
               YS  D+ +  D                 DE  K           NP   + +    
Sbjct: 123 TEQLYSEVDQRFLADRYVVGTCPRCGYENARGDECTKCGASYEATDLKNPRSKLTDAPLI 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--W 216
               + +F  L  ++++LL + +S          +  V +F K  +KDL     T D  W
Sbjct: 183 LKPTKHWFLVLDLFKERLLEWIDSK-------NWKPNVSNFAKGYIKDLHARAITRDSTW 235

Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKDI 267
           GI IP  D    ++YVW DA   Y++ T       GS      +W       ++ IGKD 
Sbjct: 236 GIPIPLPDTEGKVLYVWFDAPIGYISATKEWAELRGSPESWKDYWCDQSTQLVNFIGKDN 295

Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + FHA  +PA  +  N P  L  ++ ++ F   +G + SKS G  ID  +  +    D +
Sbjct: 296 IPFHAAIFPAMTMGQNQPYKLVDELPANEFYNLEGRQFSKSDGWYIDLDDFFKRYTPDQI 355

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY +        D  +     ++R N +L    GNLV+R +    K  +G +P       
Sbjct: 356 RYAIAANAPETSDSEFTWKDFQQRCNIELLGKYGNLVNRVLVFAHKQCEGRVPQKKDLQP 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   L    R+++E  ++     + RA   V+ L    + YFDA++PW+  +    RAS
Sbjct: 416 IDLGFLENMQRLVEEAAQSYDTFKLRRASQIVMELAQLGNVYFDAKRPWQDAREEATRAS 475

Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             T +   ++ ++ LA++    +P+ A +I+ +L
Sbjct: 476 METTIACCLDCLKLLALISFPIIPESAEQIWKML 509


>gi|254492772|ref|ZP_05105943.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226511812|gb|EEH61157.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 684

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|238028342|ref|YP_002912573.1| methionyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877536|gb|ACR29869.1| Methionyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 718

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 223/517 (43%), Gaps = 47/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+
Sbjct: 17  RRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAE 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  +++  R  +   D   IS+D+F  T    +      ++  + D G I +  
Sbjct: 77  QEGITPKQLIERVWREHKRDFDSYAISFDNFYTTDSDENRVLSETIYLALKDAGLIAERD 136

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME---------- 161
               Y    + +   D   KG      A  QY        + + P + +           
Sbjct: 137 IEQAYDPVKQMFL-PDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELLNPYSVVSGATP 195

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                  +FF+LS    +  ++       +   E  N++  ++    ++ L D  +SR  
Sbjct: 196 VRKTSTHHFFKLS--DPRCENFLRGWVGGLAQPEATNKMREWLGEAGEAKLADWDISRDA 253

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +         LD    ++        H IGKDI
Sbjct: 254 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNHCEKLGLDFDAWTRPGSTTEQYHFIGKDI 313

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     I+  +  + LR
Sbjct: 314 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLR 373

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   ++ A  +D   + +  + RVN+DL     N+ SR+   ++K ++G +      + 
Sbjct: 374 YYFAAKLNATMEDLDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----SA 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDR 443
            +  +L+     + +I  + + +   RAL Q + L   V+ Y D  KPWE  K   N   
Sbjct: 430 MNHPLLASLRGTIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWEQAKDPANAVA 489

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 V++E  R L++ L+  +P++   +   L +A
Sbjct: 490 LHETCSVSLEAFRLLSLALKPVLPRVVEAVEAFLGIA 526


>gi|268600117|ref|ZP_06134284.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584248|gb|EEZ48924.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 684

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 224/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|227827837|ref|YP_002829617.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|259511562|sp|C3MW97|SYM_SULIM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|227459633|gb|ACP38319.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 573

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 250/522 (47%), Gaps = 54/522 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 2   KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-- 119
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    +  
Sbjct: 62  IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 121

Query: 120 -----------------YKGC--YSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPV 157
                             KG   Y G+   R +   N  ++   +   + +       P+
Sbjct: 122 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + +K+ S+  S  E  +P   ++  + +V  GLK  S++R    WG
Sbjct: 182 -FKKSKHWFFDLSEFNEKIRSWISSSNE--MPDNVKSVALGWVSEGLKPRSITRDN-KWG 237

Query: 218 IKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD----LHVIGKD 266
           I  P    +D    +YVW +AL  Y++         G   K   +W ++     + IGKD
Sbjct: 238 IPAPFIGAEDKS--IYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKD 295

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGV 322
            + FH +  PA L+++     LP  + +  ++L++G+K SKS  +G  ID  E  E + V
Sbjct: 296 NIPFHVVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWID--EAPELMDV 353

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           +  R+ L+R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P    
Sbjct: 354 EYWRFVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRS 413

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  ++D+  +S+ + + + + +  +   +     +++  V E + Y + + PW+L K  
Sbjct: 414 DALDDNDKKTISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAG 473

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +   +  LY+ V  ++ +AILL   +P  A +I+D+L + +
Sbjct: 474 KEVELNNTLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGN 515


>gi|48477614|ref|YP_023320.1| methionyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|68565981|sp|Q6L1M5|SYM_PICTO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|48430262|gb|AAT43127.1| methionyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 690

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 238/528 (45%), Gaps = 61/528 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E++ ++ A+ Y N   H+GH A   + AD+  RF+RL+G +VLF +G+DE+G  I   A+
Sbjct: 3   ERILVNCALPYANGPLHLGHIAGAYLAADIFVRFNRLNGNEVLFVSGSDEYGTPITITAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH--------------------- 102
               + +   D   R        LDI +D F RTT+  H                     
Sbjct: 63  KNKTSPQNVADIYHREHEQTFKNLDIVFDIFTRTTDPEHVKDVDEFFINLLNKNYLEKRY 122

Query: 103 --HDTCRILWKKISDKGDIYKGC-YSGWYSLR----DEAYYNDDEVYKGADGQYYNAQHN 155
                C+   K + D+  I+  C Y G+   R    DE     D + +  + +  ++   
Sbjct: 123 MVSPYCKSTGKFMPDRY-IHGTCPYCGFNDARGDQCDECGRTLDPI-ELINPRCTSSNEE 180

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSR 211
           P+ ++  E +F RL    D+LL+Y  +   +      +  VI+F +S    GL+   ++R
Sbjct: 181 PL-FIATEHFFLRLDLLSDELLNYLNTRENW------KPNVINFTRSIINEGLRPRPITR 233

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG-YLDN--PDGSKAKFW----PADLHV 262
              DWG+ IP +      +YVW +AL  Y+T    Y  N   D    KFW        + 
Sbjct: 234 D-IDWGVPIPLNGFEGKRIYVWFEALIGYITGARVYSKNIKDDDYWKKFWLDKNVKSYYF 292

Query: 263 IGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I WPA L++  +  LP  V ++ ++  +G + SKS G      E +  V 
Sbjct: 293 IGKDNIPFHTIIWPAMLIAHGDYNLPYNVPANEYLRFEGAQFSKSRGIGYTVNEALSLVN 352

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            + LRY++   +    D  +  + L  RVN++L +  GN + R +  I      +     
Sbjct: 353 KNYLRYYMASIMPETGDSSFSLNELVSRVNSELIDKYGNFIYRVLGFISNRKINIKKC-- 410

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                 +SI++   R   E  E+++N  I   L   +  V+  + YF+++ PW +   + 
Sbjct: 411 ----EPDSIINEFKRFFDEYSESIKNIKIKNGLQIWLEAVTLANNYFNSEAPWNI--NDH 464

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +R + VL+ ++++   L  +L  +VP  +++I   L     N  F  +
Sbjct: 465 ERLNQVLFTSLKISMYLTAMLYPYVPSASSEILSSLGFKTVNYKFDDM 512


>gi|240114050|ref|ZP_04728540.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 700

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 224/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 20  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 80  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 137

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P + +            
Sbjct: 138 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 197

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 198 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 255

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 256 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 315

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 316 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 375

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 376 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 432

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 433 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 490

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 491 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 522


>gi|194099679|ref|YP_002002814.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|193934969|gb|ACF30793.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 719

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 220/512 (42%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 39  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 98

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 99  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 156

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 157 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 216

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 217 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGGETTLSDWD 274

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA       H 
Sbjct: 275 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHF 334

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 335 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 394

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 395 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 451

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 452 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 509

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 510 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 541


>gi|240126602|ref|ZP_04739488.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268685183|ref|ZP_06152045.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268625467|gb|EEZ57867.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 684

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 223/512 (43%), Gaps = 56/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  +  + +  +    +AD     I YD++  T    +    + +++ +   G I    
Sbjct: 64  GIAPEDMIAKVRK--EHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRV 121

Query: 124 YSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------ 160
               +    + +  D  V             G + +     ++P +              
Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPE 181

Query: 161 --EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLS 208
             E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  
Sbjct: 182 LRESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQPEALNKMKEWLGEGEETTLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H 
Sbjct: 240 ISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ + 
Sbjct: 300 IGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLN 359

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G    P
Sbjct: 360 PEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG---RP 416

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              + S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K  
Sbjct: 417 KDVSGS--ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQE 474

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +R   V    +     L   L   +P+ A
Sbjct: 475 GQDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|145495850|ref|XP_001433917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401038|emb|CAK66520.1| unnamed protein product [Paramecium tetraurelia]
          Length = 428

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 167/325 (51%), Gaps = 45/325 (13%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           MI AD +A++  +  L     TGTDEHG K+ ++A++  +  + + D  S  F+ +A+  
Sbjct: 1   MIYADAIAKYKSVKLL-----TGTDEHGLKVYRSAKHQPL--QQYCDSISNQFKQLANSF 53

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            I YD FIRTT+ +H    +  W  + + G I K  Y G+Y   +E++ N          
Sbjct: 54  -IKYDQFIRTTDPQHIVKVQKNWNLLQNNGFIIKDTYKGYYCQVEESFVN---------- 102

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                 H   Q++EE+ YFF+    +D L +  ++ P        +NE+   + + +  +
Sbjct: 103 ------HKTDQYLEEDNYFFKFD--KDYLETCIKNAPS-----RYQNELKQLIINSIC-I 148

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           S  ++ + WGI++P+D   ++YVW+DAL  YL    +               +HVIGKDI
Sbjct: 149 SRPKQRYYWGIEVPNDNNQLIYVWLDALLGYLQEEQH-------------HYMHVIGKDI 195

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           +RFHA+YWP+FL   N     ++  H   +    K+SKSLGNVIDP +++++   + +R 
Sbjct: 196 VRFHALYWPSFLKGINNQSTTELIVHNHWIRNNMKMSKSLGNVIDPFQLLKKYNQNQIRL 255

Query: 328 FLVREIACGKDGFYDKDGLKKRVNA 352
           + + +     D  +++  L+K  N 
Sbjct: 256 YFLTQGPQNMDVSFEESKLEKCWNT 280


>gi|313667363|ref|YP_004047647.1| methionyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313004825|emb|CBN86249.1| methionyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 684

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 221/508 (43%), Gaps = 53/508 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L   +  +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRSHECHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKAGGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFGEYFKADSQAEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               S  ++L+  +   + I E  +++   RAL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----SGSALLAKLTAQSEAIAECYESREYARALRDIMALADAVNEYVDANKPWELAKQE- 474

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +   +  V  E+I    IL     P L
Sbjct: 475 GQDERLHEVCSELINAFTILTAYLAPVL 502


>gi|159045247|ref|YP_001534041.1| methionyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|187647718|sp|A8LIJ9|SYM_DINSH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157913007|gb|ABV94440.1| methionyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 572

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/524 (22%), Positives = 230/524 (43%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D F R++ +R+    +    K+++ G I +   
Sbjct: 63  AGKPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEEVSE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              YS  D  +  D  +            +G   +    Q +P   +             
Sbjct: 123 KQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 VRETKHLYLRQSALKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +       P     + YVW DA   Y+  T    + +G    +  ++W  D        
Sbjct: 242 PVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGADEVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN  SR        Y   +
Sbjct: 362 EILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSKYGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA+  ++E++++  +  L+    +M    + +A A++ ++    + Y  A  PW + 
Sbjct: 422 PAGGAYGPAEEALIAELTTKLRAYEGHMDAMEVRKAAAELRAIWVAGNEYLQAAAPWSVF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+PD A+ ++ + + ++R  A+L Q F+P  +  +   +   D
Sbjct: 482 KTDPDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAMKAED 525


>gi|332161115|ref|YP_004297692.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665345|gb|ADZ41989.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 635

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 205/468 (43%), Gaps = 42/468 (8%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQ 148
             + +   +++ ++   G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE 120

Query: 149 YYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P + +              E E +FF L A+ D L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA- 253
           ++  + +SGL+   +SR    +G +IPD P    YVW+DA   Y+     L +  G    
Sbjct: 178 KMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDF 237

Query: 254 -KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +FW     ADL H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS 
Sbjct: 238 DEFWRKDSEADLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSR 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSV 366
           G  I     ++ +  D LRY+   +++   D    + +   +RVNAD+ N + NL SR+ 
Sbjct: 298 GTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNA 357

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +    A   +D ++    +     I +   N+   +A+ ++++L    +R
Sbjct: 358 GFINKRFAGKL----ADHLADPALYKTFTDAATSIADAYSNRESSKAIREIMALADIANR 413

Query: 427 YFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           Y D Q PW + K     A    +  + + + R L   L+  +P L  +
Sbjct: 414 YVDEQAPWVVAKEEGRDADLQAICSMGINLFRVLMTYLKPVLPALTER 461


>gi|307566244|ref|ZP_07628690.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345048|gb|EFN90439.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 687

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 233/510 (45%), Gaps = 51/510 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + +D+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVIFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+  +  +D  +   IS+D + RTT   H+      +KK+ + G + 
Sbjct: 64  RARKEGITPQDVCDRYHKMIKDSFNEFGISFDVYSRTTSNVHNKFASDFFKKLYEDGKLI 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWME-- 161
           +      Y    + +  D     E     +   Y  Q              NP   +   
Sbjct: 124 EKEGEQLYDESAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTISGS 183

Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                  + ++  L+ YQ+ L  +  + H E+      R+ V    KS L D+ L  +  
Sbjct: 184 KPVLKNTKNWYLPLNNYQEWLKEWILKEHKEW------RSNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPAD----L 260
               DWGI +P       ++YVW DA   Y++ T  L + +    G+  K+W       +
Sbjct: 237 TRDLDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDKEPERFGNWEKWWKDPETRLI 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +     LP  V ++ F+  + +KIS S    +   E + +
Sbjct: 297 HFIGKDNIVFHCIIFPIMLKAHGGYILPDNVPANEFLNLENDKISTSKNWAVWLHEYLVD 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                D LRY L       KD  +     ++R N++L +  GN V+R++ +  K ++G++
Sbjct: 357 FPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVSIYGNFVNRALQLTKKYWNGIV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D+ +++    V +++  ++       A  + ++L    +RY    +PW++ 
Sbjct: 417 PPCGELKDIDKQVIAEFKDVKEKVEASLDAFKFREAQKEAMNLARIGNRYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           KT+P R  TVL ++++++  L+I  + F+P
Sbjct: 477 KTDPKRVETVLNISLQLVANLSIAFEPFLP 506


>gi|149200861|ref|ZP_01877836.1| methionyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145194|gb|EDM33220.1| methionyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 572

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 229/525 (43%), Gaps = 53/525 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLFARYCRARGHEVLFLCATDEHGTPAELAAAKAGQ 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      ++A    +S+D F R++  ++    +   K++ DKG I +   +  
Sbjct: 66  PVADYCAEMHAVQAEIARGFRLSFDHFGRSSSSQNRRLTQNFAKRLHDKGLIREVSETQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV---------------QWME 161
           YS  D  Y  D            E  +G        Q +PV               +  E
Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGYESARGDQCDNCTKQLDPVDLINPRSAVSGATDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219
            +  + R S  +D+L ++ +S  ++  PI   +    ++  G  L+D  ++R   DWGI 
Sbjct: 186 TKHLYLRQSQMKDELEAWIDSKTDW--PILTTSIAKKWLNDGDGLQDRGITRD-LDWGIP 242

Query: 220 IP-DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD--------L 260
           +  DD  +      + YVW DA   Y+          G +A    ++W  D         
Sbjct: 243 VQFDDAPWQGMDGKVFYVWFDAPIEYIACGAEWAEAHGLEASAWERWWRTDKGADDVRYT 302

Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +E
Sbjct: 303 QFMGKDNVPFHTLSFPATILGSAEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALE 362

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +  ++P
Sbjct: 363 ILPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEVVP 422

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
           T GA+   + +++   +  ++E   +MQ   + ++ + + ++  E + Y     PW   K
Sbjct: 423 TGGAYGAQETALIERLTTRIREYEAHMQAMEVRKSASALRAIWVEGNEYLQEAAPWSTFK 482

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +P+RA+    + + +IR  A+L   F+P  A  +   +   D+N
Sbjct: 483 ADPERAAMQTRLALNLIRLYAVLSAPFIPDAAAAMLTAMQTDDDN 527


>gi|242062646|ref|XP_002452612.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor]
 gi|241932443|gb|EES05588.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor]
          Length = 802

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 235/533 (44%), Gaps = 67/533 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      A
Sbjct: 17  RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+  +  + C+ ++ K+ +   + + 
Sbjct: 77  MEEKCSPKEICDKYHAIHNEVYKWFDIKFDKFGRTSSPQQTEICQAIFHKLMENNWLTEN 136

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWM--------- 160
                Y      +  D  V           K A G Q  N  H  NP + +         
Sbjct: 137 TMQQLYCDTCRRFLADRLVEGTCPIEGCTNKAARGDQCDNCSHMLNPTELIDPKCKVCKN 196

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212
                E +  F  L   + KL++Y       +  +  +N + +   ++K GLK   ++R 
Sbjct: 197 TPHIRETDHLFLDLPLLEGKLVNYINDTS--VAGMWSQNAIQATNAWLKEGLKSRCITRD 254

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHV 262
              WG+ +P +     + YVW DA   Y++ T         +  NPD  +          
Sbjct: 255 -LKWGVPVPIEKYKDKVFYVWFDAPIGYVSITASYTPEWEQWWKNPDNVEL------FQF 307

Query: 263 IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIE 315
           +GKD + FH I +P+ LL    N  + K +    ++ ++G K SKS      GN      
Sbjct: 308 MGKDNVPFHTIMFPSTLLGTGENWTMMKTISVTEYLNYEGGKFSKSKGIGVFGNDAKDTN 367

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---- 371
           +  EV     RY+L+       D  +    L+ ++N++L N +GN ++R +S I K    
Sbjct: 368 IPPEV----WRYYLLMNRPEASDTLFTWTDLQAKLNSELLNNLGNFINRVLSFIAKPVGA 423

Query: 372 DYDGMIP-TPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            YD +IP  PGA +    S I    S+ +++  + M+   + + L   + + ++ +RY  
Sbjct: 424 GYDSIIPDAPGAESHPSTSDIAEKVSKSVEQYLDAMEKVKLKQGLKSAMGISTDGNRYLQ 483

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + W+L K NP   + V+  +V ++  LA LL+ F+P  + ++   L ++ E
Sbjct: 484 ESEFWKLYKDNPANCAIVMKTSVGLVYLLACLLEPFMPSFSKEVLRQLNLSPE 536


>gi|316983598|gb|EFV62580.1| methionyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 720

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 221/511 (43%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G    +    D HG  +  AAQ  
Sbjct: 39  KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQKQ 98

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 99  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPEL 217

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 275

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 276 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 335

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 336 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 395

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 396 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 454

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 455 ----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 510

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 511 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 541


>gi|224129132|ref|XP_002328898.1| predicted protein [Populus trichocarpa]
 gi|222839328|gb|EEE77665.1| predicted protein [Populus trichocarpa]
          Length = 801

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 236/519 (45%), Gaps = 49/519 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 16  KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+     R++    +IS+D+F RT+  +  + C+ ++KK+ D   + + 
Sbjct: 76  MEENSTPKQICDKYHAIHREVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLLDNNWLSEN 135

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWM--------- 160
                Y    E +  D  V          Y  A G Q  N     NP + +         
Sbjct: 136 TMKQLYCDTCERFLADRLVEGTCPTEGCNYDSARGDQCENCGKLLNPTELINPRCKQCKN 195

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212
                +    F  L   +DKL+SY ES    +     +N + +   ++K GLK   ++R 
Sbjct: 196 TPRIRDTNHLFLELPQLKDKLVSYIESMS--VAGSWSQNAIQTTNAWLKEGLKPRCITRD 253

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDI 267
              WG+ +P D     + YVW DA   Y++ T     PD  K    P ++ +   +GKD 
Sbjct: 254 -LKWGVPVPLDEFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPDNVELYQFMGKDN 311

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P+ L+    N  + K +    ++ ++  K SKS G  V         + V+ 
Sbjct: 312 VPFHTVMFPSTLIGTGENWTMMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVEV 371

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-T 379
            RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     Y  +IP  
Sbjct: 372 WRYYLLTNRPEVSDTLFTWSDLQAKLNSELLNNLGNFINRVLSFLAKPPGLGYGSIIPDA 431

Query: 380 PGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
           PGA +    + +     + +++  E M+   + + L   +S+ SE + Y    + W+L K
Sbjct: 432 PGADSHPLTKKLAGEVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYK 491

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +    S V+  ++ ++  LA LL+ F+P  + ++F  L
Sbjct: 492 EDQPSCSIVIKTSLGLVYLLACLLEPFIPSFSVEVFKQL 530


>gi|315931152|gb|EFV10125.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 377

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 129/215 (60%), Gaps = 2/215 (0%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+SKS GNV+ P EV++ 
Sbjct: 1   MHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDA 60

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R + M  K   G I  
Sbjct: 61  YGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNILK 120

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +   L+     L    E ++N   +R L ++   +S  +      +PW L K 
Sbjct: 121 EGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKE 179

Query: 440 NP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           N  ++A+ ++ +   ++ + ++LL   +PK   K+
Sbjct: 180 NKHEQANALVALCANILAKTSLLLSPTLPKSCEKV 214


>gi|311087576|gb|ADP67655.1| methionyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 547

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 231/506 (45%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   HIGH  E I AD+  R+HR+ G +V F +  D HG  I   AQ+ 
Sbjct: 7   KILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFVSADDAHGTAIMLKAQDL 66

Query: 66  GVTTKVFVDQNSRNFRDMADV----LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            ++    +    +N R    +      IS+D++  T    +    R ++  +++KG I +
Sbjct: 67  EISPNKLI----KNIRIEHQIDFSNFKISHDNYYSTHSLENLYLSRKIFTCLNEKGLIKE 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME--------- 161
                 Y    + +  D  +             G + +  +A + P   +          
Sbjct: 123 KKIFQLYDTVKKIFLPDRFIKGTCPICKSKNQYGDNCEICSATYEPTDLINPISVISGKK 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 +  +F L ++ + L  +  S       I++  E   + K GLK  ++SR    +
Sbjct: 183 PILKNTKHLYFDLPSFTNMLKKWIHSGVLEESVIKKTEE---WFKVGLKSWAISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G KIP+ P    YVW+DA   Y++    L   +   +  + W  +      H IGKDI+ 
Sbjct: 240 GFKIPNHPNKYFYVWLDAPIGYISAFKNLCFKSKKLNFNELWNQNSNYELYHFIGKDIIY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L + +   P  +F HG +   G K+SKS G +I   + I+    D+LRY+ 
Sbjct: 300 FHTLFWPAILEAVSFRQPSGIFVHGHLTMNGLKLSKSRGALIKASDWIQYFDSDSLRYYY 359

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +++N+D+ N + NL +R+ S I K ++G +    +  +  +
Sbjct: 360 ASKLSNKTHDIEINLEDFIQKINSDIVNKLVNLAARNASFINKYFNGYLSDKLSNIKLYK 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAST 446
             ++  S + ++  EN +   I   + + + L+   ++Y + +KPW++K+T  N      
Sbjct: 420 YFVNTSSSI-EDFFENREFSFI---VKESMRLLDIANQYINEKKPWKIKRTEENIRELQN 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  + + + R + I L+  VP LA K
Sbjct: 476 ICTMGINLFRIIMIFLKPIVPDLAIK 501


>gi|15675970|ref|NP_273096.1| methionyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|25009401|sp|Q9K1Q0|SYM_NEIMB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7225249|gb|AAF40501.1| methionyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139494|gb|EGC62034.1| methionyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199263|gb|ADY94718.1| methionyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 685

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 221/511 (43%), Gaps = 54/511 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ +++A+ Y N   H+GH  E I  DV  RF +L G    +    D HG  +  AAQ  
Sbjct: 4   KILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQKQ 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  +  + +    +  D      I YD++  T    +    + +++ +   G I     
Sbjct: 64  GIAPEDMIAKVREEHLADFTGFF-IGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P + +             
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSY------YESHPEFILPIERRNEVISFVKSG----LKDLSL 209
            E E +FF+L    D L ++      ++  P   L  E  N++  ++  G    L D  +
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPH--LQAEALNKMKEWLGEGEETTLSDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVI 263
           SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD      H I
Sbjct: 241 SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           GKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  
Sbjct: 301 GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP 360

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G +    
Sbjct: 361 EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV- 419

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
               +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K   
Sbjct: 420 ----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +R   V    +     L   L   +P+ A
Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTA 506


>gi|15616730|ref|NP_239942.1| methionyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681485|ref|YP_002467870.1| methionyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682041|ref|YP_002468425.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471164|ref|ZP_05635163.1| methionyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11134932|sp|P57210|SYM_BUCAI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782855|sp|B8D8R1|SYM_BUCA5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782856|sp|B8D715|SYM_BUCAT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|25293139|pir||D84942 methionine-tRNA ligase (EC 6.1.1.10) [imported] - Buchnera sp.
           (strain APS)
 gi|10038793|dbj|BAB12828.1| methionyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621774|gb|ACL29930.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624328|gb|ACL30483.1| methionyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311085852|gb|ADP65934.1| methionyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087005|gb|ADP67085.1| methionyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 547

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 231/506 (45%), Gaps = 50/506 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   HIGH  E I AD+  R+HR+ G +V F +  D HG  I   AQ+ 
Sbjct: 7   KILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFVSADDAHGTAIMLKAQDL 66

Query: 66  GVTTKVFVDQNSRNFRDMADV----LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            ++    +    +N R    +      IS+D++  T    +    R ++  +++KG I +
Sbjct: 67  EISPNKLI----KNIRIEHQIDFSNFKISHDNYYSTHSLENLYLSRKIFTCLNEKGLIKE 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME--------- 161
                 Y    + +  D  +             G + +  +A + P   +          
Sbjct: 123 KKIFQLYDTVKKIFLPDRFIKGTCPICKSKNQYGDNCEICSATYEPTDLINPISVISGKK 182

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 +  +F L ++ + L  +  S       I++  E   + K GLK  ++SR    +
Sbjct: 183 PILKNTKHLYFDLPSFTNMLKKWIHSGVLEESVIKKTEE---WFKVGLKSWAISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
           G KIP+ P    YVW+DA   Y++    L   +   +  + W  +      H IGKDI+ 
Sbjct: 240 GFKIPNYPNKYFYVWLDAPIGYISAFKNLCFKSKKLNFNELWNQNSNYELYHFIGKDIIY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L + +   P  +F HG +   G K+SKS G +I   + I+    D+LRY+ 
Sbjct: 300 FHTLFWPAILEAVSFRQPSGIFVHGHLTMNGLKLSKSRGALIKASDWIQYFDSDSLRYYY 359

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +++N+D+ N + NL +R+ S I K ++G +    +  +  +
Sbjct: 360 ASKLSNKTHDIEINLEDFIQKINSDIVNKLVNLAARNASFINKYFNGYLSDKLSNIKLYK 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAST 446
             ++  S + ++  EN +   I   + + + L+   ++Y + +KPW++K+T  N      
Sbjct: 420 YFVNTSSSI-EDFFENREFSFI---VKESMRLLDVANQYINEKKPWKIKRTEENIRELQN 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANK 472
           +  + + + R + I L+  VP LA K
Sbjct: 476 ICTMGINLFRIIMIFLKPIVPDLAIK 501


>gi|221055079|ref|XP_002258678.1| trna ligase [Plasmodium knowlesi strain H]
 gi|193808748|emb|CAQ39450.1| trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 727

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 134/243 (55%), Gaps = 10/243 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62
           ++ST + Y N +PHIGHAY  +++D++ RF + +  +     V+  +G DEHG KI + +
Sbjct: 145 FVSTPVYYANDKPHIGHAYCNVLSDIICRFAKWEYTEGRRKRVILFSGMDEHGLKIERKS 204

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   + +  +++  S  ++ M D L +  + F RTT + H    + +WK ++  G IYKG
Sbjct: 205 KKLKIPSMEYINNMSSYYQMMNDKLHVHVNIFYRTTSQFHKSFVQQVWKYLTQNGYIYKG 264

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y + +E Y N+ E+      Q      N +   EE  YFF +  ++  L  +Y+ 
Sbjct: 265 TYRGYYDVNEEKYLNEFEL-----KQKEKNDPNILYIEEENSYFFNILKFKKFLTDFYQR 319

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             E I P   + E++ FV   LKD+ +SR    WGIKIP + +  +YVW DAL +Y+++ 
Sbjct: 320 SDELIYPSYLQKEMLHFVNHELKDVCISRYNTQWGIKIPGEEKGTIYVWFDALLSYVSSV 379

Query: 243 GYL 245
            Y+
Sbjct: 380 LYM 382



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 126/235 (53%), Gaps = 14/235 (5%)

Query: 248 PDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           PDG+ ++     W   + VIGKDIL+FH + +   L S NL LP+K+  HG I  +  K+
Sbjct: 465 PDGTLSRLFQKAWNPHVQVIGKDILKFHGVLYICLLQSLNLKLPQKIICHGLIKSENVKM 524

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGN 360
           SKS+GNVI P +++E+   D +R +      C  + F DK+  K+ + +    + N +GN
Sbjct: 525 SKSIGNVISPFDIVEKYDPDIVRLYF---FGCA-NIFEDKNFKKEHLESFQLFVRNNVGN 580

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R +S+ + +    I   G     D  I    S + Q++   + N+     L  +++L
Sbjct: 581 LLYRVMSLCMDNNYKHIYKDGQANFLDSPIFRQSSEMKQKLLILIHNKDFALFLENLMAL 640

Query: 421 VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +V+++F  Q+PW  K TN   R + ++Y T+E I+  ++ L   +P++ + I 
Sbjct: 641 IKQVNKFFVHQEPW--KCTNDSVRFNQIIYETLEGIKFFSVFLYPIMPQICSSIL 693


>gi|260772448|ref|ZP_05881364.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611587|gb|EEX36790.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 658

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 208/484 (42%), Gaps = 48/484 (9%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +     
Sbjct: 3   EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQQDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144
            DIS+D++  T  + + +    ++ ++   G I     S  +    + +  D  V KG  
Sbjct: 63  FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKQMFLPDRFV-KGTC 121

Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180
                         A G+ Y+     NP   +        + E +FF L  ++  L  + 
Sbjct: 122 PKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+ 
Sbjct: 182 RSGS---LQTETANKMQEWFEGGLQQWDISRDAPYFGFEIPGETNKFFYVWLDAPIGYMG 238

Query: 241 TTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   L +   D    ++W  D      H IGKDI+ FH+++WPA L  +    P  VF H
Sbjct: 239 SFKNLCSKRNDLDFDEYWRKDSQTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPTNVFVH 298

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352
           G++   G K+SKS G  +     ++ +  + LRY+   ++    D    + +   +RVNA
Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVNA 358

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410
           D+ N I NL SR+   I K +D  +    A  E      +   R+  L E RE       
Sbjct: 359 DVVNKIVNLASRNAGFISKRFDNQLSATFAEPELYAEFAAAAERIAELYETRE------F 412

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPK 468
            RA+ ++ +L  + ++Y D + PW + K      +   +  V + + R L   L+  +P 
Sbjct: 413 GRAIREITALADKANQYVDEKAPWVIAKQEGQEQALQDICTVGINLFRVLMTYLKPVMPA 472

Query: 469 LANK 472
           LA +
Sbjct: 473 LAER 476


>gi|282163406|ref|YP_003355791.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155720|dbj|BAI60808.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 669

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 209/503 (41%), Gaps = 45/503 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++  + Y N   HIGH    I AD+  R  R+ G +  F  G+D HG  I   A+  G
Sbjct: 10  VLVTCGLPYANGAAHIGHLRTYIPADMFVRTLRMMGQNTTFVCGSDTHGTPIVVNAEEQG 69

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY----KG 122
            T    V +    F       +I ++ +  T +  +H+  R + + +   G +Y    K 
Sbjct: 70  TTPGELVKKYHLVFEQTFKNFEIDFNHYGSTDDLENHERTRSIVRDLEKNGYVYPKEIKV 129

Query: 123 CYSGWYSLRD--EAYYNDDEVYKGADGQYYNAQHNPVQWME------------------- 161
            Y G +  R   + Y      Y GA  +         + +E                   
Sbjct: 130 AYCG-HCQRGLPDRYVEGTCPYCGALARGDECDIGCQKHLEPGDILDPRCRICGGKAETR 188

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            +E +FF+LS +   L  Y       +      N    + K  LKD  ++R   +WG+K 
Sbjct: 189 VKEHFFFKLSEFGPFLTDYLNK----LHATSNVNYAKEWAKD-LKDWCITR-NLEWGVKY 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
           P     ++YVW+DA   Y+  T  Y+ +        W  D   +H IG DI+  H I+WP
Sbjct: 243 PGHEDLVVYVWVDAPIGYIAFTEEYMSSIGEDWKNIWKGDSRIIHFIGGDIIYHHCIFWP 302

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV--IDPIEVIEEVGVDALRYFLVREIA 334
           A L  A   LP  V + G I    +K SKS G +  ++   +      D LRY+++   +
Sbjct: 303 AMLKGAGYTLPWGVVASGMIKVNDKKFSKSRGYIVWVEDDYLAHGFHPDLLRYYILSYTS 362

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +     + +VN +L    GN V+R ++ I  +  G+        E D S+    
Sbjct: 363 HTKDINFSWKEFQTKVNKELVGSFGNFVNRVLTFI--ESKGL----DVKGEIDPSVSEAI 416

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              +   +  ++N    +    +I+L    + YF   +PW+L K +      VLY   ++
Sbjct: 417 KTAMSVAKAEIENYEFKKICDSIITLADFGNTYFQGHEPWKLIKEDKAACENVLYNCTQI 476

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           ++ LAIL    +P  A +I+ +L
Sbjct: 477 VKALAILSWPSIPAKAEEIWGML 499


>gi|301026438|ref|ZP_07189877.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299879675|gb|EFI87886.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 618

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 203/448 (45%), Gaps = 45/448 (10%)

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I  
Sbjct: 4   AQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKN 63

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME-------- 161
              S  Y   ++  +  D   KG             + +   A ++P + +E        
Sbjct: 64  RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGA 122

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    
Sbjct: 123 TPVMRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPY 179

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDI 267
           +G +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI
Sbjct: 180 FGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDI 239

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY
Sbjct: 240 VYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRY 299

Query: 328 FLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A   +
Sbjct: 300 YYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELA 355

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-- 444
           D  +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A  
Sbjct: 356 DPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADL 415

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472
             +  + + + R L   L+  +PKL  +
Sbjct: 416 QAICSMGINLFRVLMTYLKPVLPKLTER 443


>gi|238749949|ref|ZP_04611453.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711878|gb|EEQ04092.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 635

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 206/469 (43%), Gaps = 44/469 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY---- 149
             + +   +++ ++   G I     S  Y   ++  +  D   KG      A  QY    
Sbjct: 61  DENRELSSLIYGRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNC 119

Query: 150 --YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
               A ++P + +              E E +FF L A+ D L ++  S     L  +  
Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVLRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVA 176

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGS 251
           N++  + +SGL+   +SR    +G +IPD P    YVW+DA   Y+     L +   D  
Sbjct: 177 NKMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRDDLD 236

Query: 252 KAKFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +FW      DL H IGKDI+ FH+++WPA L  +    P  +F HG++   G K+SKS
Sbjct: 237 FDEFWREGSTTDLYHFIGKDIVYFHSLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKS 296

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365
            G  I     ++ +  D LRY+   +++   D    + +   +RVNAD+ N + NL SR+
Sbjct: 297 RGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 356

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I K +DG +    A   +D  +    +     I +   N+   +A+ ++++L    +
Sbjct: 357 AGFISKRFDGKL----ADQLADPELYKTFTDAAVSIADAYSNRESSKAIREIMALADIAN 412

Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           RY D Q PW + K     A    +  + + + R L   L+  +P L  +
Sbjct: 413 RYVDEQAPWVVAKAEGRDADLQAICSMGINLFRVLMTYLKPVLPALTER 461


>gi|182682199|ref|YP_001830359.1| methionyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130163|sp|Q87B68|SYM_XYLFT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710940|sp|B2I7S0|SYM_XYLF2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28057584|gb|AAO29432.1| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632309|gb|ACB93085.1| methionyl-tRNA synthetase [Xylella fastidiosa M23]
          Length = 702

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 226/536 (42%), Gaps = 43/536 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+ 
Sbjct: 18  VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A   ++++D +  T    +       +  +   G I     + +
Sbjct: 78  PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163
           Y      +  D  V       GA  QY        A ++P +              + + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF   A+ D  L ++ S    +  ++ + +     K GL+   +SR    +G KIPD 
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFKIPDQ 256

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277
           P    YVW+DA   YL +   L    G       ++       H IGKDI+ FHA++WPA
Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336
            L       P ++  +G++   G K+SKS G  I     ++  +  DALRY+   + +  
Sbjct: 317 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    +      RVNADL   + NL SR  S I   ++G +    A T  D        
Sbjct: 377 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDRFV 432

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454
             L  IR+  +      A+ Q + L  E ++Y D  KPW + K +   A   L+ V  + 
Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 490

Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +    +L+ A  P L +  I    F+A     +Q ++Q L  G  + + + P+F R
Sbjct: 491 LNLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTR 545


>gi|77747705|ref|NP_779783.2| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|307578469|gb|ADN62438.1| methionyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 690

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 226/536 (42%), Gaps = 43/536 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+ 
Sbjct: 6   VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 65

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A   ++++D +  T    +       +  +   G I     + +
Sbjct: 66  PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 124

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163
           Y      +  D  V       GA  QY        A ++P +              + + 
Sbjct: 125 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF   A+ D  L ++ S    +  ++ + +     K GL+   +SR    +G KIPD 
Sbjct: 185 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFKIPDQ 244

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277
           P    YVW+DA   YL +   L    G       ++       H IGKDI+ FHA++WPA
Sbjct: 245 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 304

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336
            L       P ++  +G++   G K+SKS G  I     ++  +  DALRY+   + +  
Sbjct: 305 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 364

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    +      RVNADL   + NL SR  S I   ++G +    A T  D        
Sbjct: 365 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDRFV 420

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454
             L  IR+  +      A+ Q + L  E ++Y D  KPW + K +   A   L+ V  + 
Sbjct: 421 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 478

Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +    +L+ A  P L +  I    F+A     +Q ++Q L  G  + + + P+F R
Sbjct: 479 LNLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTR 533


>gi|238795773|ref|ZP_04639287.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720499|gb|EEQ12301.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 635

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 207/469 (44%), Gaps = 44/469 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA------------DG 147
             + +   +++ ++   G I     S  Y   ++  +  D   KG             + 
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNC 119

Query: 148 QYYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           +   A ++P + +              E E +FF L A+ D L ++  S     L  +  
Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVA 176

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           N++  + +SGL+   +SR    +G +IPD P    YVW+DA   Y+     L +  G   
Sbjct: 177 NKMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLD 236

Query: 254 --KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +FW     ADL H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS
Sbjct: 237 FDEFWRKDSDADLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKS 296

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365
            G  I     ++ +  D LRY+   +++   D    + +   +RVNAD+ N + NL SR+
Sbjct: 297 RGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 356

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I K + G +    A   +D ++    +     I +   ++   +A+ ++++L    +
Sbjct: 357 AGFINKRFAGKL----ADQLADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVAN 412

Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           RY D Q PW + K     A    +  + + + R L   L+  +P L  +
Sbjct: 413 RYIDEQAPWVVAKEEGRDAELQAICSMGINLFRVLMTYLKPVLPSLNER 461


>gi|188992353|ref|YP_001904363.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|226710938|sp|B0RWA1|SYM_XANCB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167734113|emb|CAP52319.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 694

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 212/504 (42%), Gaps = 54/504 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  + +   +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLDG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADL-HVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G       A     +L H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLAAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G+++  G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDE 388
           + G D    +      RVNADL     NL SR    I K +DG     +P P  +    E
Sbjct: 363 SGGVDDLDLNLGDFVARVNADLVGKFVNLASRCAGFIGKRFDGKLADALPDPAQYARFVE 422

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446
           +        L  IRE  +      A+ Q ++L  E ++Y D  KPW + K     A   +
Sbjct: 423 A--------LAPIREAYERNDPASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQS 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470
           V    + + R L   L+  +P+ A
Sbjct: 475 VCTQGLNLFRLLVAALKPILPRTA 498


>gi|253795688|ref|YP_003038784.1| putative methionyl-tRNA synthetase [Candidatus Hodgkinia cicadicola
           Dsem]
 gi|253739996|gb|ACT34331.1| putative methionyl-tRNA synthetase [Candidatus Hodgkinia cicadicola
           Dsem]
          Length = 494

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 219/510 (42%), Gaps = 54/510 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVL----ARFHRLDGLDVLFTTGTDEHGQKIA 59
           R++  + TA+AY NA  H GHA+E+  A VL    A++H     D     GTD+HG K+ 
Sbjct: 11  RKRYTVCTALAYTNACVHAGHAFELAAAAVLSAYIAKWH-----DTRLVCGTDDHGLKLK 65

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD-KGD 118
            +A    V        N+     +A  L     D++ T   RH        +K++  K  
Sbjct: 66  ASADWLKVHPVKLAVVNANKALALASRLRAPVSDWLSTLHVRHTRRAESCLRKVTRLKKW 125

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +Y+  Y GWYS   +AY  DD+V    +G Y   +  PV+W +E G F   +A + KL S
Sbjct: 126 VYELSYCGWYSPYADAYCGDDDVSLSRNGMYM-CEGQPVEWAQERGVFLNYNALKPKLAS 184

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGIKI-PDDPQYIMYVWIDALT 236
            Y +       + +R  V + +K+  +++  SR+    +G+K    + +  ++VW +AL 
Sbjct: 185 VYRADVILTPNVSKRAVVSAVMKA--QNVCFSRQPAAGYGLKFKTKEAKLSLWVWFEALM 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            Y    G                +HV+G+D+  FH  Y+ A  L  N  LPK V  H  +
Sbjct: 243 AYAGAGGV-------------NKIHVVGRDVFWFHITYYVALALCLNQKLPKAVLCHAHV 289

Query: 297 LHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK----DGFYDKDGLKKRVN 351
              G  K+SKSLG   D +  + +   DA+++ L     C K    +   D DG   R  
Sbjct: 290 AENGRRKLSKSLG---DELVSLPQTW-DAIKHAL-----CSKPNKANVAVDADG-ASRFR 339

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A +A  +GNLV R    + K         G  + +D   +       + ++ +       
Sbjct: 340 AQIAKALGNLVKR----LTKLTATRGAKAGKLSANDWIHIMYAKHAPKVVKHHAMRLRFG 395

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + +A +   +++ +      KPW L+     + +  +Y T    +     L+ F+   A+
Sbjct: 396 QVVAFLTGRIAKTNASLSKLKPW-LRADAAHKLAVWIYTTAVFTK----WLEPFLGHSAS 450

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            I D L  AD    F   D++  P     K
Sbjct: 451 SIIDALLTADHT--FTPFDRKPPPAISRQK 478


>gi|124802025|ref|XP_001347338.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23494916|gb|AAN35251.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 749

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 138/246 (56%), Gaps = 8/246 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIA 59
           E L IST + Y N +PHIGHAY  I+ DVL ++ +L G++     ++F +G DEHG KI 
Sbjct: 142 EYLLISTPVYYSNDRPHIGHAYCNILCDVLYKYEKLKGVEKKKKGIIFFSGMDEHGLKIE 201

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K      +    ++D  S  ++DM   L +  + F RT+   H    + +WK +     I
Sbjct: 202 KKCNKNKMKIIEYIDDISNYYKDMNKKLSVDVNLFYRTSYSFHKMFVQNVWKYLVHNNYI 261

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G+Y++ +E Y ++ E+    +G+Y     N +   EE  YFF +  ++D L+ +
Sbjct: 262 YKDTYKGYYNINEERYISEQEL---REGKYKIDNENIIYVEEENSYFFNILKFKDYLIDF 318

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE +  FI P   R +VI  +K+ L+++ +SR    W I+IP++ +  +YVW DAL +Y+
Sbjct: 319 YEKNENFIYPPYLRKQVIYTLKNELRNICISRYNTKWAIQIPNEAEGTIYVWFDALLSYV 378

Query: 240 TTTGYL 245
           ++  YL
Sbjct: 379 SSMLYL 384



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 144/261 (55%), Gaps = 27/261 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFW   + VIGKDIL FHAI +   L S NL LP+K+  HG I ++  K+SKSL NV++P
Sbjct: 496 KFWNPFIQVIGKDILNFHAILYICLLKSLNLELPQKILCHGLIKNENIKMSKSLNNVVNP 555

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMIL 370
            +++++   D LR +    + CG   + DK+  ++ + +    L N +GNL+ R VS+ +
Sbjct: 556 FDLLKKYNPDVLRLYF---MGCG-SIYEDKNYKEQNIESFELFLRNNVGNLLYRVVSLCI 611

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH--------RALAQVISLVS 422
           ++   M+P      + D +I      +L E ++N++N+LI         + L  +++L+ 
Sbjct: 612 ENNYNMVPVIKT-NDYDSNI------ILNEWKDNIKNKLIPYLDNMEYIQFLELIMTLIK 664

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILF--V 479
            V+++F    PW  KK +     T +YVT+E ++  +IL+  F+P ++  I  +I F  +
Sbjct: 665 NVNKFFVHNTPWNYKK-DTQHFHTTIYVTLECMKYFSILMFPFIPNISLAILRNIGFDDI 723

Query: 480 ADENRCFQSLDQRLKPGFMLH 500
            +EN     L+ R    FML+
Sbjct: 724 DEENISLDMLETR-TTKFMLN 743


>gi|21230796|ref|NP_636713.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769206|ref|YP_243968.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|25009358|sp|Q8PAY7|SYM_XANCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81304835|sp|Q4USM5|SYM_XANC8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21112396|gb|AAM40637.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574538|gb|AAY49948.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 696

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 212/504 (42%), Gaps = 54/504 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  + +   +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLDG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADL-HVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G       A     +L H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLAAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G+++  G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDE 388
           + G D    +      RVNADL     NL SR    I K +DG     +P P  +    E
Sbjct: 363 SGGVDDLDLNLGDFVARVNADLVGKFVNLASRCAGFIGKRFDGKLADALPDPAQYARFVE 422

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446
           +        L  IRE  +      A+ Q ++L  E ++Y D  KPW + K     A   +
Sbjct: 423 A--------LAPIREAYERNDPASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQS 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA 470
           V    + + R L   L+  +P+ A
Sbjct: 475 VCTQGLNLFRLLVAALKPILPRTA 498


>gi|320156804|ref|YP_004189183.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932116|gb|ADV86980.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 660

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 218/519 (42%), Gaps = 60/519 (11%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  R+ RL G  V F    D HG  I   AQ  G++ +  +   S   +     
Sbjct: 3   EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMSPEEMIAAVSIEHQKDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144
            DIS+D++  T    + +    ++ ++   G I     S  +    E +  D  V KG  
Sbjct: 63  FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121

Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180
                         A G+ Y+     NP   +        + E +FF L  ++  L  + 
Sbjct: 122 PKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+ 
Sbjct: 182 RSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMG 238

Query: 241 TTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   L +   D    ++W  D      H IGKDI+ FH+++WPA L  +    P  VF H
Sbjct: 239 SFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVH 298

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352
           G++   G K+SKS G  +     +E +  + LRY+   ++    D    + +   +RVNA
Sbjct: 299 GYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNA 358

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLI 410
           D+ N I NL SR+   I K ++G +       E     ++   R+  L E RE       
Sbjct: 359 DVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEFVAAADRIAELYEARE------F 412

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P 
Sbjct: 413 GRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQEICSVGINLFRVLMTYLKPVMPA 472

Query: 469 LANKIFDIL------------FVADENRCFQSLDQRLKP 495
           LA +    L              A E   F++L  R+ P
Sbjct: 473 LAARTEAFLNEELTWEGVAQPLTAHEITAFKALFNRIDP 511


>gi|330836672|ref|YP_004411313.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748575|gb|AEC01931.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 748

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 237/514 (46%), Gaps = 48/514 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R    I++A+ Y N  PH+G+  +++ ADV ARF R  G + L+  GTDE+G     
Sbjct: 10  MKKRR--LITSALPYVNNIPHLGNLTQVLSADVFARFCRSKGYETLYVCGTDEYGTATET 67

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +   D+     RD+    +IS+D F RT+        + ++  +   G I+
Sbjct: 68  KALQEGVTPQELCDRYHAIHRDIYRWFNISFDHFGRTSTPLQTKIVQDIFNAVDANGYIH 127

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEGYFFRL 169
           +      Y   D+ Y  D  V        Y+ A G Q  N     NP   ++        
Sbjct: 128 EHEIEQLYCTHDQMYLADRYVTGTCPHCAYENARGDQCENCGTLLNPTDLIKPVCGVCGN 187

Query: 170 SAYQDKLLSYYESHPEFILPIERR------------NEVI----SFVKSGLKDLSLSRKT 213
           +    K    Y   P+ ILP+               N  I    ++++ GLK+  ++R  
Sbjct: 188 TPELRKTKHLYLDLPQ-ILPLLEEWMQKASVEGFWANNAIQMTKAWIREGLKERGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266
             W I +P       + YVW DA   Y++ T  L +       +W  P ++ +   IGKD
Sbjct: 246 LKWSIPVPRKGYENKVFYVWFDAPIGYISITANLTD---QWETWWRNPENVELFQFIGKD 302

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FH + +P+  L+      +   + S  ++ ++G K SKS G  I   +V +  + VD
Sbjct: 303 NIPFHTVIFPSSQLATGQKWTMLHHMSSTEYLNYEGGKFSKSKGIGIFGNDVQDTGIPVD 362

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R+++        D  +     +++VN +L   + NLV+R++S I + YDG +P+ G+ 
Sbjct: 363 IWRFYMYYNRPETSDVTFTWKDFQEKVNGELIGNLSNLVNRTLSFIKRFYDGELPS-GSI 421

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E+  + ++    V++ + E  + +    AL  + +L    ++ F A +PW+ + T+P R
Sbjct: 422 DENLMTQVAEKEAVIEALLERAEER---DALRTIFALSDIGNKAFQAGEPWKTRTTDPTR 478

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A+ +L   V VI  +A+L+  F+P  + KI   L
Sbjct: 479 AADLLTTLVYVIHDIAVLIAPFMPGTSEKILGWL 512


>gi|77747505|ref|NP_297839.2| methionyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 690

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 226/535 (42%), Gaps = 41/535 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+ 
Sbjct: 6   VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 65

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A   ++++D +  T    +       +  +   G I     + +
Sbjct: 66  PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 124

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163
           Y      +  D  V       GA  QY        A ++P +              + + 
Sbjct: 125 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGTTPELRDS 184

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF   A+ D  L ++ S    +  ++ + +     K GL+   +SR    +G +IP+ 
Sbjct: 185 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPNQ 244

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277
           P    YVW+DA   YL +   L    G       ++       H IGKDI+ FHA++WPA
Sbjct: 245 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 304

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336
            L       P ++  +G++   G K+SKS G  I     ++  +  DALRY+   + +  
Sbjct: 305 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 364

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    +      RVNADL   + NL SR  S I   ++G +    A T  D        
Sbjct: 365 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDQFV 420

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             L  IR+  +      A+ Q + L  E ++Y D  KPW + K + +  + +  V  + +
Sbjct: 421 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH-NADAQLHAVCTQGL 479

Query: 456 RQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               +L+ A  P L +  I    F+A     +Q ++Q L  G  +H  + P+F R
Sbjct: 480 NLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLIGGHTIHP-YSPLFTR 533


>gi|78187048|ref|YP_375091.1| methionyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123771060|sp|Q3B3N3|SYM_PELLD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78166950|gb|ABB24048.1| methionyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 702

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/559 (23%), Positives = 239/559 (42%), Gaps = 62/559 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++TA+ Y N   H+GH A   + AD+  R  RL G +VL   G+DEHG  I 
Sbjct: 1   MAQFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRHKRLKGEEVLHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+  R   +      IS+D + RT+ + HH+T +  + ++  KG  
Sbjct: 61  ITAEKEGISPRDVVDRYHRMNLEAFLKCGISFDCYGRTSSELHHETAQEFFLELERKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG---- 164
            +     +Y      + +D  V             G   +      +P++ +  +     
Sbjct: 121 NRRTEKLFYDAEGGRFLSDRYVSGTCPICGSTEASGDQCEQCGTHLSPMELINPKSKISN 180

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLS 210
                     ++F L  YQ +L  +  SH +     + R+ V+++    +K GL D +++
Sbjct: 181 ATPELRDTLHWYFPLGRYQAELERFVNSHED-----DWRSNVLNYTRTWLKGGLNDRAIT 235

Query: 211 RKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD----- 259
           R   +WGIK+P    +    ++YVW DA+  Y++ T       G +   + W  +     
Sbjct: 236 RD-LNWGIKVPLGEAEAVGKVLYVWFDAVLGYISFTRQWAEEQGDRDLWRHWWQNPETRL 294

Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           +  IGKD + FH +  PA L++ N         L   V +  F+  +G K SKS    + 
Sbjct: 295 VQFIGKDNVVFHTLMLPAILMAWNEGREDGIYNLADNVPASEFMNFEGRKFSKSRNYAVY 354

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             E +++   D LRY +       KD  +     + R N +LA+ +GN + RS+      
Sbjct: 355 LGEFLQKFPADTLRYSIAMNYPENKDTDFSWTDFQNRTNGELADTLGNFIKRSIDFTNSR 414

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLVSEVDRYFDAQ 431
           + G +P      E +   L +     Q   +        R  A + + +    +R+  + 
Sbjct: 415 FGGEVPHSCTVQEWEG--LGIDWYATQSQLDQAYEGFHFREAATIAMDIARAANRFLTSA 472

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-----NRCF 486
           +PW+  KT+P+ A   + +++ +   L+I L   +P+  ++I  +L           +C 
Sbjct: 473 EPWKAIKTDPEAAGRTMALSLNLCHALSIALYPVIPETCDRIHRMLGFKGGVDGLVRKCE 532

Query: 487 QSLDQRLKPGFMLHKTFDP 505
             L   L+P   +     P
Sbjct: 533 PILKTLLEPALPMGHKLSP 551


>gi|25009404|sp|Q9PFV8|SYM_XYLFA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|9105408|gb|AAF83359.1|AE003902_4 methionyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 702

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 226/535 (42%), Gaps = 41/535 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+ 
Sbjct: 18  VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A   ++++D +  T    +       +  +   G I     + +
Sbjct: 78  PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163
           Y      +  D  V       GA  QY        A ++P +              + + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGTTPELRDS 196

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF   A+ D  L ++ S    +  ++ + +     K GL+   +SR    +G +IP+ 
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPNQ 256

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277
           P    YVW+DA   YL +   L    G       ++       H IGKDI+ FHA++WPA
Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336
            L       P ++  +G++   G K+SKS G  I     ++  +  DALRY+   + +  
Sbjct: 317 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    +      RVNADL   + NL SR  S I   ++G +    A T  D        
Sbjct: 377 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDQFV 432

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             L  IR+  +      A+ Q + L  E ++Y D  KPW + K + +  + +  V  + +
Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH-NADAQLHAVCTQGL 491

Query: 456 RQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               +L+ A  P L +  I    F+A     +Q ++Q L  G  +H  + P+F R
Sbjct: 492 NLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLIGGHTIHP-YSPLFTR 545


>gi|325967829|ref|YP_004244021.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707032|gb|ADY00519.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 584

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 230/513 (44%), Gaps = 47/513 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R +  I +A  Y  A PH+G+    ++ ADV  R+ RL G DV+F +G+DEHG  I   A
Sbjct: 14  RRRWVIGSAWPYIYAVPHLGNLIGSVLSADVFVRYLRLKGDDVVFVSGSDEHGTPIEVEA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +   D+     + + +  +I +D++ RT    H +  R  + K+ +   I+  
Sbjct: 74  LQLGIRPRELTDRMHEIIKKLFEFWEIGFDNYTRTESPVHREFVREFFMKLYNNSYIFTK 133

Query: 123 CYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHN---------------------P 156
                Y  +D+ Y  D  +     Y G D    +   N                     P
Sbjct: 134 EDEVPYCPKDKIYLPDRFIIGTCPYCGYDKARGDQCENCGRLLEPKLLINPRCAICGSKP 193

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           + W+    ++  L+  +D++  Y E +    LP   +   +  +K GLK  +++R    W
Sbjct: 194 I-WVRTAHWYLDLTRLEDRVKKYVEENTA--LPENAKQMSLGMLKEGLKPRAITRDN-KW 249

Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTT-GYL---DNPDGSKAKFWPADLHVI---GKDI 267
           GI+   P      +YVW +A+  Y++ T  Y     N D  K  ++  +  V+   GKD 
Sbjct: 250 GIEAPFPGADNKTIYVWFEAVLGYISATIEYFRNRGNEDEWKRYWFDPNTRVVFFVGKDN 309

Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVD 323
           + FH I  PA L+++  P  +P    S  ++L +G+K SKS  +G  ID  E +  + VD
Sbjct: 310 IPFHVILLPAMLIASGDPYVMPYTTASTEYLLFEGKKFSKSQRIGIWID--EALALMPVD 367

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R+ L+ +    KD  +        +N+ L + IGN + R ++ I   ++G IP+ G+ 
Sbjct: 368 YWRFVLIYQRPESKDTSFAWHQTLDVINSILNDIIGNFIHRVLTFISTRFNGEIPS-GSL 426

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            + D           +      +   +  AL + I +    +RY + ++PWEL K N D 
Sbjct: 427 RDIDIKYRDEALDHFKNSEGYYEKIELRDALLEAIEIARVGNRYLNERQPWELIKGNKDE 486

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           A  V+   + +++ L+I L   +PK    ++ +
Sbjct: 487 AGAVILNALHIVKILSIDLWPIMPKSMESLWTM 519


>gi|119899492|ref|YP_934705.1| methionyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|187645705|sp|A1KAG3|SYM_AZOSB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119671905|emb|CAL95819.1| MetG protein [Azoarcus sp. BH72]
          Length = 723

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 215/518 (41%), Gaps = 55/518 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I  D+  RF R+ G  V +    D HG  I   A+  
Sbjct: 4   KILVTNALPYANGDIHLGHLVGYIQGDIWVRFQRMRGNSVHYVCADDTHGTPIMLRAEKE 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  +D+ +  + RD  D   + +D +  T    +      ++ K+   G I     
Sbjct: 64  GITPEQLIDRVHGEHLRDFTD-FGVGFDHYHSTHSAENRAYAEEIYGKLLGAGFIETRSI 122

Query: 125 SGWYSLRDEAYYND----DEVYKGADGQYYN-------AQHNPVQWME------------ 161
             +Y    E +  D     E  K   G  Y        A + P +               
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAGDQYGDNCEVCGAAYAPTELKNPYSAVSGAKPVL 182

Query: 162 --EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
              E YFFRLS      +         +  E  L  E  N++  ++    ++ L D  +S
Sbjct: 183 RTSEHYFFRLSDPRAVEFLRDWTRGTNAGGERRLQAEAANKMKEWLGEAGENKLSDWDIS 242

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT----------TGYLDNPDGSKAKFWPADL 260
           R    +G +IP  P    YVW+DA   YL +              D  D ++A+    +L
Sbjct: 243 RDAPYFGFEIPGAPGKYFYVWLDAPIGYLASFRHYAERRGDIAVADYTDAARAESHGTEL 302

Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIE 318
            H IGKDIL FHA++WPA L  A    P ++  +GF+   G K+SKS G  I     +++
Sbjct: 303 VHFIGKDILYFHALFWPAMLKFAGYRTPTQLCVNGFLTVDGAKMSKSRGTFITARSYIVQ 362

Query: 319 EVGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LR YF  +     +D   + D +  +VN+DL     N+ SR    I K +DG +
Sbjct: 363 GLNPEWLRYYFASKSNGTMEDVDLNLDDMIAKVNSDLVGKYVNIASRCAGFIAKRFDGKL 422

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                   +D       +++ Q   E        RAL +++ L    ++Y +  KPWEL 
Sbjct: 423 GASDPKATADFESAYESAQIAQAYDERDYG----RALREIMRLADLANQYVNDHKPWELA 478

Query: 438 KTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           K +   A    V    + + R L + L+  +P LA K+
Sbjct: 479 KQDGQDAQLHVVCSTALTLFRDLTLYLKPVLPGLAAKV 516


>gi|15789599|ref|NP_279423.1| methionyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235311|ref|YP_001688511.1| methionyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|25009397|sp|Q9HSA4|SYM_HALSA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10579953|gb|AAG18903.1| methionine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726377|emb|CAP13158.1| methionine--tRNA ligase [Halobacterium salinarum R1]
          Length = 689

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 220/506 (43%), Gaps = 55/506 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + YP    HIGH    +  D  +R  R  G + +F +GTD HG  IA  A  AGV 
Sbjct: 14  VTCGLPYPTGDLHIGHLRTYVSGDAFSRALRKLGQETVFVSGTDMHGTPIAVQAIEAGVG 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                 +    + D  +   +++D +  T E+ + +  R       D   +Y+      Y
Sbjct: 74  PLDLGLERHEQYADTFEEFSVAFDTYGHTDEETNVELTREFVGAWEDNDHVYETEIQVAY 133

Query: 129 SLRDEAYYND----------------DEVYKGA---------DGQYYNAQHNPVQWMEEE 163
               + +  D                DE  +G          +        N  ++ E  
Sbjct: 134 DPDADQWLPDRYVEGTCPYCGEHARGDECDEGCQRHLEPGEIEAPVSTITGNSAEYHERA 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             F RLS +Q+ L         FI  +E     +N+   +++ GL+D  ++R   DWGI 
Sbjct: 194 HKFLRLSDFQEYLEG-------FINRMEGTNNAKNQPREWIEGGLEDFCITRD-LDWGID 245

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILR 269
            P +     ++YVW+DA   Y+  T       G++   W +         +HVIG+DI++
Sbjct: 246 YPGEGGDDLVLYVWVDAPIEYVAATKQYSERVGTEEFDWASVWKDGDGEIIHVIGRDIIQ 305

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
            H ++WP+ L  A+   P+ V + GF+   G  +S S    I   E ++     D LRY+
Sbjct: 306 HHTVFWPSMLAGADYAEPRAVCATGFVNIDGRGLSTSKNRAIWAAEYLDAGFHPDLLRYY 365

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       +D  +      +RVN +LA+ +GN   R++    +++DG   TP   + +D+
Sbjct: 366 LATASGFERDVNFSWAEFAQRVNTELADAVGNFAYRALLFANRNFDG---TPQEVSLTDD 422

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            + +  ++ + +  + +    +  A  + ++L    + Y    +PW L   + + A+ V+
Sbjct: 423 -VETEIAQAMDDYEDALNEYDLRTAGERAVALARFGNEYIQHNEPWNL---DSEAAAPVM 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
              V++++ +A+LLQ F+P+    ++
Sbjct: 479 RDCVQLVKAVAVLLQPFLPEKTETLW 504


>gi|149174947|ref|ZP_01853571.1| methionyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148846284|gb|EDL60623.1| methionyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 681

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 226/516 (43%), Gaps = 53/516 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R ++ ++ A+ Y N   HIGH  E I  D+  RF +L G    F    D HG  I  
Sbjct: 1   MTQR-RILVTAALPYANGDIHIGHLVEYIQTDIWVRFQKLRGHACRFFCADDTHGTAIMI 59

Query: 61  AAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A+  G + +  + D   ++  D A   +I +D++  T  +++   C  +W+ +     +
Sbjct: 60  RARQEGRSEEALIADVQQKHITDFAG-FNIEFDNYGSTNSEQNRKLCYEIWEALRTADLV 118

Query: 120 YKGCYSGWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWMEE 162
            +   +  + +++  +  D             D+     D  G  Y      +P+  +  
Sbjct: 119 VEKEVTQLFDVQENTFLADRFVKGTCPKCKAPDQYGDNCDKCGSTYTPADLADPISTLSN 178

Query: 163 EG--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-----GLKDLSL 209
                      F R+      L+ + +S          ++EV +++K       L+D  +
Sbjct: 179 TTPELRTASHLFVRIEDLHGFLVEWTQSGEHL------QSEVANYLKGHFLGDPLRDWDI 232

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-----HVIG 264
           SR    +G +IPD P    YVW DA   Y+ +T       G     W  +      H IG
Sbjct: 233 SRPAPYFGFEIPDSPGNYWYVWFDAPIGYIASTLEWCEKHGEDFDQWWKNPETEVHHFIG 292

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           KDI  FH ++WPA L +A   LP+KV  HGF+   GEK+SKS G  +     +  +    
Sbjct: 293 KDITYFHTLFWPAMLKTAGFNLPEKVHIHGFLTVDGEKMSKSKGTFVKAATYLNHLDPAC 352

Query: 325 LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           LRY+   ++     D   + D   ++VN+DL   + NL SRS   + K   G+     A+
Sbjct: 353 LRYYYASKLGPRLDDLDLNLDEFIQKVNSDLVGKVVNLASRSAKFVAK--TGL---SAAY 407

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D  + +  +     I    +    + A+ ++++L    ++++D +KPWE+KK    +
Sbjct: 408 PE-DGGLFAHAASRSDAIAAAYEACDYNGAMREILALADRANKFWDDKKPWEVKKDGSRQ 466

Query: 444 AST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A    +  +++ + +Q+ I L   +P+L+ +   +L
Sbjct: 467 AELQDICTISLNLYQQIVIYLTPVLPQLSEQTGALL 502


>gi|254294466|ref|YP_003060489.1| methionyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042997|gb|ACT59792.1| methionyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 570

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 228/530 (43%), Gaps = 53/530 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF RL G DVL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFKRLKGDDVLYVCATDEHGTPAELAASA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++ + + D+     R   +   +S+D F R++ +++    +   +K+   G I +   
Sbjct: 63  AGISVQEYCDEQHEIQRAAGEGFGLSFDWFGRSSREQNAKLTQHFAEKLEANGLIEERTS 122

Query: 125 SGWYSLRDEAYYNDD---------EVYKGADGQYYNAQH--NPVQWMEEEG--------- 164
              YS+ D  +  D          E  K    Q  N     +PV  +E            
Sbjct: 123 KQVYSVDDGRFLPDRYVEGTCPHCEFEKARGDQCDNCGRLLDPVDLIEPYSAVSGSKNIE 182

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  F      QD + ++ +    +  P   R+    ++  GL+D +++R    WG+
Sbjct: 183 IRDTVHLFLLQEKMQDTIRAWVDEAETW--PQLARSIAYKWLDEGLQDRAITRD-LKWGV 239

Query: 219 KIPDD----PQY---IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD-------- 259
            +  D    P +   + YVW DA   Y+  T       DN D     +W  D        
Sbjct: 240 PVLKDGKPRPGFEDKVFYVWFDAPVEYIAATQEWAEAGDNRDWES--WWRTDKGADDVSY 297

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +P  +  +  P     K+ +  ++   G K S S    +   + +
Sbjct: 298 VQFMGKDNVAFHTVSFPVTIFGSQEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVFMDQAL 357

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+     G D  +  +G +  +N+DLAN +GN V+R     +  +DG++
Sbjct: 358 GILPSDYWRWYLIANAPEGSDAPFTWEGFQSAINSDLANVLGNFVNRITKYTVSKFDGVL 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E +  +       L  +  + +N    +A A+  ++ +  + Y    +PW   
Sbjct: 418 PDGGVAGEDEAWLEGELKTRLPILMSHYENMEFRKAAAETRAIWAVGNEYLTKAEPWVKF 477

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           KT+ D A+  +   + ++    IL    +P+   KI D + + +E+R F+
Sbjct: 478 KTDKDAAAVGVRYGLNLVALFGILALPIIPETGKKILDAIGIPEEHRSFK 527


>gi|304321411|ref|YP_003855054.1| methionyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300313|gb|ADM09912.1| methionyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 575

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 221/511 (43%), Gaps = 44/511 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +++A+ Y N   H+G+    M+ ADV ARF R  G +V F   TDEHG     AA+ 
Sbjct: 3   RILVTSALPYINGVKHLGNLVGSMLPADVYARFMRARGHNVAFLCATDEHGTPAELAARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +          +A    +S+D F R++   +H+  R    ++  +G + +   
Sbjct: 63  AGQPVAEYCAAQHETQASLAAAFGLSFDHFGRSSSPTNHELTRHFADRLEAEGYLEERVS 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQ 158
              YS  D  +  D  V        ++ A G   +                  +    V+
Sbjct: 123 QQVYSNADARFLPDRYVEGTCPNCGFEKARGDQCDNCGKLLDPTDLIDPYSAISGSKDVE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   S  + ++ ++ ++H ++  P+  R+    ++  GL+D S++R   DWGI
Sbjct: 183 MRDTRHLYLLQSKLEGEVRAWVDTHKDW--PLLTRSIAYKWIDEGLRDRSITRD-LDWGI 239

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDIL 268
            +  D     + YVW DA   Y+  T   D P+G ++ +W  D        +  +GKD +
Sbjct: 240 PVRRDGFEGKVFYVWFDAPIEYIAATKEWD-PEGWES-WWRTDQGADEVTYVQFMGKDNV 297

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FH +++P  L+ +  P  +   + S  ++   G K S S G  I   + I+ +  D  R
Sbjct: 298 AFHTVFFPCTLIGSREPWKRVDHLKSLNWLTWYGGKFSTSEGRGIFMDQAIDLMPADTWR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+       D  +        VN DLA+ +GNLV+R        ++G +P  G   E+
Sbjct: 358 WYLMANAPESDDTAFTLQSFAGAVNKDLADVLGNLVNRVTRFTASKFEGQVPPGGEPGEA 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           ++++          +   ++     +A A +  L +  + Y     PW   KT+PD A+ 
Sbjct: 418 EQTLYREVDDRCAALTGALEAMEFRKAFAALRGLWAAGNEYLQVTAPWTAFKTDPDAAAV 477

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   + +I  +A +    +P+ A+KI  I 
Sbjct: 478 SVRTALNLIMLIAEVSAPVIPETADKILGIF 508


>gi|301166247|emb|CBW25822.1| putative methionyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 569

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 236/514 (45%), Gaps = 45/514 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E++ L I+ A+ Y N   H GH A   + +DV  R  +L G   LF +G+DEHG  I 
Sbjct: 1   MQEKKYL-ITAALPYANGPIHFGHMAGAYLSSDVYNRHRKLQGHKTLFISGSDEHGVAIM 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+      + +V++  R   ++     I +D F +T+   H +     +K + +KG I
Sbjct: 60  LNAKKVSEPYQEYVNKWHREHSELFKDFGIGFDFFGQTSADYHKEEVIKWFKVLHEKGYI 119

Query: 120 YKG------CYSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
                    C      L D       Y  D E  +G +        +PV+         +
Sbjct: 120 EPKDSQQLYCNDCHNHLPDRFVEGTCYKCDYEHARGDECPNCGEFIDPVKLTNT---VCK 176

Query: 169 LSAYQD----KLLSYY----ESHPEFILPIERRNE---------VISFVKSGLKDLSLSR 211
           + A Q+     +  YY    + HPE+   +E +++         V S  K  L D +++R
Sbjct: 177 ICASQNISEVTVTQYYICLSKYHPEYRKWLETKSDEWRKTVYPYVDSLTKENLHDRAITR 236

Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK---AKFWPAD----LH 261
              DWGI +P  +     +YVW DA   Y++ T  YL+  + S+     +W +D     H
Sbjct: 237 D-IDWGIDVPLPNTEGKKLYVWFDAPIGYVSNTKKYLEQVESSEDYINDWWNSDDVELTH 295

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            IGKD + FH + +P   +++ +  P  +V ++ F+  +G++ SKS G+ +D  + + + 
Sbjct: 296 FIGKDNIIFHTVIFPTMSMASGICKPANQVPANQFLNLEGKQFSKSTGHYVDAAKAVAKF 355

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G +ALRY+L+  +    D  +  + L+ +VN +LAN IGN ++R +    K+++  +P  
Sbjct: 356 GQNALRYYLLSILPEQTDSSFSWEQLQAKVNNELANNIGNFLNRCLKFTQKNWNEGMPAK 415

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                +  S     S  ++ + E +    I + + +V+ +    + +F    PW   K +
Sbjct: 416 YYEGFTGSSACESLSADIKALNELVDGYNIKKGIEKVMFIGQSANNFFSDNAPWAQIKED 475

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D A   L  +      L ++++ F+P L++ I 
Sbjct: 476 KDLAGKTLAHSSIYALCLGVIMKPFLPALSDSIL 509


>gi|259416472|ref|ZP_05740392.1| methionyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259347911|gb|EEW59688.1| methionyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 573

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 118/526 (22%), Positives = 229/526 (43%), Gaps = 49/526 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+     + AD+ AR++R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGNEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D + R++  ++H   +    K+ + G I +   
Sbjct: 63  AGKPVADYCAEMHEVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
              YS  D  +  D            E  +G   +    Q +P   +             
Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F R S+ +D+L  + +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLFLRQSSMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+   G      G       ++W  D        
Sbjct: 242 AVKKGTEDWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKSDADWERWWRTDKGADDVKY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA LL +  P  +   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPSDYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEQV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA+ E +++++   S  +     +M+   + ++  ++ ++    + Y  +  PW + 
Sbjct: 422 PEGGAWGEQEQALIEELSTRIGAYERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           K +P+RA+  + + + +IR  A+L   F+P  ++++F+ L   D +
Sbjct: 482 KEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFEALGSEDRD 527


>gi|71900625|ref|ZP_00682751.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|71729619|gb|EAO31724.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
          Length = 702

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 226/536 (42%), Gaps = 43/536 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+ 
Sbjct: 18  VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A   ++++D +  T    +       +  +   G I     + +
Sbjct: 78  PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163
           Y      +  D  V       GA  QY        A ++P +              + + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF   A+ D  L ++ S    +  ++ + +     K GL+   +SR    +G +IPD 
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPDQ 256

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277
           P    YVW+DA   YL +   L    G       ++       H IGKDI+ FHA++WPA
Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336
            L       P ++  +G++   G K+SKS G  I     ++  +  DALRY+   + +  
Sbjct: 317 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    +      RVNADL   + NL SR  S I   ++G +    A T  D        
Sbjct: 377 IDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDHIQYDRFV 432

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454
             L  IR+  +      A+ Q + L  E ++Y D  KPW + K +   A   L+ V  + 
Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 490

Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +    +L+ A  P L +  I    F+A     +Q ++Q L  G  + + + P+F R
Sbjct: 491 LNLFRVLITALKPILPHTSIQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTR 545


>gi|146278384|ref|YP_001168543.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|187647761|sp|A4WV24|SYM_RHOS5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145556625|gb|ABP71238.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 572

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 227/524 (43%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   +V+  +     +++A    +S+D F R++  R+H   +    ++++ G I +   
Sbjct: 63  AGKPVEVYCAEMHEIQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGQLAENGFIEEVSE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +S+ D  +  D  +            +G   +    Q +P   +             
Sbjct: 123 RQVFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 VRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LHWGV 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD-------- 259
            +       P     + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVKKGDQPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTEADWERWWRTDKGAGDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GAF E +  +++     L      M+   I +A  ++ +L    + Y  +  PW + 
Sbjct: 422 PAGGAFGEREHQLIAELQERLAAYESCMEAMEIRKAATELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+P+RA  ++ +++ +IR  A++ + F+P  A      L   D
Sbjct: 482 KTDPERAQAMIRLSLNLIRLYAVISRPFIPDAAASTMASLGCDD 525


>gi|126650518|ref|ZP_01722741.1| methionyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592674|gb|EAZ86673.1| methionyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 544

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 218/506 (43%), Gaps = 39/506 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I+  A    
Sbjct: 3   IVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAAQEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            TT+   +     F    + L  +YD + RT  + HH++ + L+ ++     +YK     
Sbjct: 63  TTTEAIANHYHEEFTKCFNELGFTYDLYTRTDAEHHHESVKGLFLQLLANNFLYKKKIEQ 122

Query: 127 WYSLRDEAYYNDDEV--------YKGADGQYYNAQH--NPVQWM--------------EE 162
            Y   D+ +  D  V         K    Q  N     +P+  +              E 
Sbjct: 123 AYCEADQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKCCKICGNEPVIRET 182

Query: 163 EGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F  S +Q +L ++  E+  E             ++  G+ D +++R   + GI +P
Sbjct: 183 EHFYFTFSQFQGRLETFLSEAKAEKRWRDNALGLTERYLAEGVPDRAVTRDLPN-GIDVP 241

Query: 222 DDPQY---IMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADL---HVIGKDILRFHAIY 274
             P +    +YVWI+A+  YLT +  +      +    W  +    +V GKD + FH + 
Sbjct: 242 V-PGFEGKKIYVWIEAVAGYLTASLEWAKQHHMAIEDLWNEETISYYVHGKDNIPFHTVI 300

Query: 275 WPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           WPA L+      LP  + S+ ++  +  K+S SL   +    ++     D++RYFL    
Sbjct: 301 WPAILMGLGAKALPTHIVSNEYLTLEKRKLSTSLNWAVWVPYILSRYDADSIRYFLTTNA 360

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +         N +L    GN V+R++  I K +   +P      E D +I   
Sbjct: 361 PENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFANQVPQ----AEVDSTIRKQ 416

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++  E+   ++     +AL  +   +   +RYFD Q+PW   K + +  +  L   V 
Sbjct: 417 TIQLFNEVGILIEGGHFKQALESIFEYIRGANRYFDEQQPWLQVKEHVEAGNCTLATCVY 476

Query: 454 VIRQLAILLQAFVPKLANKIFDILFV 479
           +I  L  LL  F+P  A K+ ++L +
Sbjct: 477 IIANLGQLLHPFLPFSAEKVRNMLGI 502


>gi|99038317|gb|ABF64929.1| methionyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 576

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 229/531 (43%), Gaps = 49/531 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  ++ I++A+ Y N   H+G+     + AD+ AR++R  G +V+F   TDEHG    
Sbjct: 1   MDDMARILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +      D+A    +S+D + R++  ++H   +    K+ + G I
Sbjct: 61  LAAAKAGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +      YS  D  +  D            E  +G   +    Q +P   +        
Sbjct: 121 TEVSEKQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISG 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E +  F R SA +D+L  + +S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLFLRQSAMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259
            DWGI +       P     + YVW DA   Y+   G      G       ++W  D   
Sbjct: 240 LDWGIAVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA LL +  P  +   + S  ++ + G + S S G  + 
Sbjct: 300 DDVKYVQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P  G + E +++++   S  +     +M+   + ++  ++ ++    + Y  +  
Sbjct: 420 FGEEVPDGGTWGEQEQTLIEELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           PW + K +P+RA+  + + + +IR  A+L   F+P  ++++F  L   D +
Sbjct: 480 PWSVFKEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGTEDRS 530


>gi|238793464|ref|ZP_04637089.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727237|gb|EEQ18766.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 635

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 206/469 (43%), Gaps = 44/469 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY---- 149
             + +   +++ ++   G I     S  Y   ++  +  D   KG      A  QY    
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNC 119

Query: 150 --YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
               A ++P + +              E E +FF L A+ D L ++  S     L  +  
Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVA 176

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           N++  + +SGL+   ++R    +G ++PD P    YVW+DA   Y+ +   L +  G   
Sbjct: 177 NKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLD 236

Query: 254 --KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +FW      DL H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS
Sbjct: 237 FDEFWREGSETDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNIFVHGYVTVNGAKMSKS 296

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365
            G  I     ++    D LRY+   +++   D    + +   +RVN D+ N + NL SR+
Sbjct: 297 RGTFIKASTYLQHFDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRN 356

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I K + G +    A   +D ++    +     I +   ++   +A+ ++++L    +
Sbjct: 357 AGFINKRFGGKL----ADKLADPALYKTFTDAAVSIADAYNSRESGKAIREIMALADIAN 412

Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           RY D Q PW + K     A    V  + + + R L   L+  +P L  +
Sbjct: 413 RYVDEQAPWVIAKEEGRDADLQAVCSLGINLFRVLMTYLKPVLPSLTER 461


>gi|153005309|ref|YP_001379634.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028882|gb|ABS26650.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 694

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 217/517 (41%), Gaps = 63/517 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+L +++A+ Y N   H+GH  E I  DV  R+ R  G  V +    D HG  I   A  
Sbjct: 3   ERLLVTSALPYANGSIHLGHLVEYIQTDVYVRYRRACGDHVTYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T K FV++      D      + +  +  T    +      ++  +  KG IYK   
Sbjct: 63  AGMTPKAFVEKYRGEQHDDFRRFGVEFSTYYTTDSPENARWAYRIYDALKAKGLIYKRSI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYN---------------------AQHNPVQ 158
              Y   D  +  D  V       GA  QY +                         PV 
Sbjct: 123 EQLYCEHDRRFLPDRFVKGTCPKCGARDQYGDVCEVCGTTYDPRDLKDPRCAICGSAPVV 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
              +  Y   L   ++ +  + E+  E  L    R +V  ++ + L+D  ++R    F +
Sbjct: 183 RSSDHAYV-DLKKAEEVIRGWVEA--EGHLEPAVREQVKGWL-ADLQDWCITRDAPYFGF 238

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADL--------------H 261
            +K PD P   +YVW+DA   YL++   Y      +  +  PA+               H
Sbjct: 239 PVKDPDFPGKFLYVWVDAPIGYLSSAEHYFAEEAPAGERLSPAEFERRYLAEGAGARLEH 298

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            IGKDILRFHA++WPA L +A L  P ++  HG +   GEK+SK+ G+ I     + + G
Sbjct: 299 FIGKDILRFHAVFWPAMLWAAGLKRPDRMPVHGHLTVNGEKMSKTRGSFITARTYL-DAG 357

Query: 322 VDA--LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +D   LRYF    +    +D     D  + RVNADLAN + NL SR  +        ++P
Sbjct: 358 LDPELLRYFYAANLGPSVQDLDLALDEFRNRVNADLANNVANLASRVAA--------LVP 409

Query: 379 TPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWEL 436
             GA   E  E  L   +R            L +R + +  + V++  ++     KPWE 
Sbjct: 410 RAGAPLAERPEPALVEVARSALAAARLAYRALEYREVVRAANQVADRCNKRMQEAKPWED 469

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +   RA  +L+   + +R +A +L   +P+    +
Sbjct: 470 PASPASRA--LLFSCAKSLRAIATILWPVMPRFCGDL 504


>gi|325981754|ref|YP_004294156.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531273|gb|ADZ25994.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 701

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 232/522 (44%), Gaps = 50/522 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+  RF ++ G +V +    D HG  I   A+
Sbjct: 3   KRKILITSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHEVYYVCADDTHGTPIMLRAE 62

Query: 64  NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRT--TEKRHHDTCRILWKKISDKGDIY 120
             G+T +  + + +S +  D +    I +D++  T  TE RH      ++ K+   G I 
Sbjct: 63  KEGITPEALIARVHSEHLGDFSG-FHIQFDNYYSTHSTETRHFS--EDIYAKLKAAGLIA 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQH------------NPVQWME-- 161
                  Y      +  D  V       GA  QY ++              NP   +   
Sbjct: 120 VRGIEQLYDPVKNMFLPDRFVKGECPKCGAKDQYGDSCEVCGAAYVPTELKNPYSAVSGA 179

Query: 162 ------EEGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                  E YFF LS  +    L ++    +  L +E  N++  +V    ++ L D  +S
Sbjct: 180 KPINKSSEHYFFSLSDPRCVDFLRHWACEGDH-LQLEAANKMREWVGEAGENKLSDWDIS 238

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIG 264
           R    +G +IPD P    YVW+DA   Y+ +   L   +  +  +FW     A+L H IG
Sbjct: 239 RDAPYFGFEIPDAPGKYFYVWLDAPVGYMGSFKNLCEREKIQFDEFWQPQSNAELYHFIG 298

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L +A    P K+F+HGF+   GEK+SKS G  I     + + +  +
Sbjct: 299 KDILYFHALFWPAMLQNAGYRTPTKIFAHGFLTVNGEKMSKSRGTFITAESYLRQGLNPE 358

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++ +  +D   + +    RVN+DL     N+ SR    I K ++G +     
Sbjct: 359 WLRYYYAAKLNSTLEDIDLNLEDFVARVNSDLVGKFINIASRCAGFISKRFEGRLVDGAQ 418

Query: 383 FTESDESILSVCSRVLQEIREN-MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           +    + +    +    E+ E+  + +    A+ Q++    E +       PWE+ K NP
Sbjct: 419 YQILQQMVNERFAAWRPEVIEHAFEAREYSAAIRQIMKFADEANEMIHQLAPWEIAK-NP 477

Query: 442 DRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           DR+        + V++   L+  L+  +P  A +I   L  A
Sbjct: 478 DRSDDLQRTCSLGVQLFYLLSRYLKPVLPATAQQIETFLNCA 519


>gi|282859895|ref|ZP_06268983.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587298|gb|EFB92515.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 687

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 230/510 (45%), Gaps = 51/510 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  ++ A+ Y N   HIGH A   + +D+  R+ RL   +V+F  G+DEHG  I  
Sbjct: 4   KKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVVFIGGSDEHGVPITI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+     +D      IS+D + RTT   H+      +KK+ ++G + 
Sbjct: 64  RAKKEGITPQDVCDRYHSMIKDSFKDFGISFDVYSRTTSDVHNKLASDFFKKLYEEGKLV 123

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQ-------------HNPVQWME-- 161
           +      Y    + +  D     E     +   Y  Q              NP   +   
Sbjct: 124 EKESEQLYDEEAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTISGS 183

Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
                  + ++  L+ YQ+ L  +  + H E+      R  V    KS L D+ L  +  
Sbjct: 184 QPVLKNTKNWYLPLNDYQEWLKEWILKEHQEW------RPNVYGQCKSWL-DMDLQPRAM 236

Query: 214 ---FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL--DNPD--GSKAKFWPAD----L 260
               DWGI +P +     ++YVW DA   Y++ T  L  + P+  G+  K+W       +
Sbjct: 237 TRDLDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGNWEKWWKDPETRLV 296

Query: 261 HVIGKDILRFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +P  L +     LP  V S+ F+  + +KIS S    +   E + +
Sbjct: 297 HFIGKDNIVFHCIIFPTMLKAHGGYILPDNVPSNEFLNLENDKISTSKNWAVWLHEYLVD 356

Query: 320 V--GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++
Sbjct: 357 FPGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWNGVV 416

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   + D+  ++    V +++   +       A  + ++L    +RY    +PW++ 
Sbjct: 417 PACGELLDVDKQAIAEFQDVKEKVEAFLNVFKFREAQKEAMNLARIGNRYITECEPWKVW 476

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           KT+P R  T+L ++++++  L+I  + F+P
Sbjct: 477 KTDPKRVETILNISLQLVANLSIAFEPFLP 506


>gi|161899027|ref|YP_614191.2| methionyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|187649779|sp|Q1GEI7|SYM_SILST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 573

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/526 (22%), Positives = 227/526 (43%), Gaps = 49/526 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+     + AD+ AR++R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D + R++  ++H   +    K+ + G I +   
Sbjct: 63  AGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
              YS  D  +  D            E  +G   +    Q +P   +             
Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F R SA +D+L  + +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLFLRQSAMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+   G      G       ++W  D        
Sbjct: 242 AVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGADDVKY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA LL +  P  +   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G + E +++++   S  +     +M+   + ++  ++ ++    + Y  +  PW + 
Sbjct: 422 PDGGTWGEQEQTLIEELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           K +P+RA+  + + + +IR  A+L   F+P  ++++F  L   D +
Sbjct: 482 KEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGTEDRS 527


>gi|56696287|ref|YP_166644.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|68565961|sp|Q5LTL1|SYM_SILPO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56678024|gb|AAV94690.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 572

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/526 (22%), Positives = 229/526 (43%), Gaps = 49/526 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D F R++  ++H   +    K+++   I +   
Sbjct: 63  AGKPVAEYCAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164
              YS  D  +  D  +            +G   +    Q +P   +E            
Sbjct: 123 RQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 182

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLYLRQSALKDQLDAWIDSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +    Q        + YVW DA   Y+   G      G       ++W  D        
Sbjct: 242 PVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHGKSDAEWERWWRTDKGADDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA L+ +  P  +   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSKFGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA+   +E++++  +  L+    +M+   + ++  ++ ++ +  + Y  +  PW L 
Sbjct: 422 PEGGAYGPQEEALIAELTTRLRAYEGHMEAMEVRKSAQELRAIWAAGNEYLQSAAPWTLF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           KT+P +A+  + + + +IR  A+L   F+P  + ++ + +  +D+N
Sbjct: 482 KTDPVQAAAQVRLGLNLIRLYAVLSAPFIPAASARMLEAMQTSDDN 527


>gi|194324311|ref|ZP_03058085.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321758|gb|EDX19242.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 652

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 222/492 (45%), Gaps = 48/492 (9%)

Query: 29  IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS-RNFRDMADVL 87
           I +D+  RF +L G   +F  G+D HG  I   A++ G+T +  V + S R+ +D  D  
Sbjct: 5   IQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQDFTD-F 63

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG--- 144
           +I++D++  T    + +    ++ K+++K  I K   +  Y    + +  D  V KG   
Sbjct: 64  EINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFV-KGTCP 122

Query: 145 ---ADGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYYE 181
              A+ QY        A ++P + +                E +FF L A +  +  + E
Sbjct: 123 KCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIE 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYLT 240
           S+   +L  E  N++  + + GL+   +SR    +G  IP  + Q   YVW+DA   Y+ 
Sbjct: 183 SNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIPGTNEQKFFYVWLDAPMGYIA 240

Query: 241 T-TGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           +   Y +  +     FW  +      H IGKDI+ FHA++WPA L S     P  VF++G
Sbjct: 241 SFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFANG 300

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNAD 353
           F+   G+K+SKS G  I     ++ +    LRY+    +    D    + +    + N+D
Sbjct: 301 FLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNSD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +   + N+ SR    I K +D  + +   F   D  + S  S+    I +  + +    A
Sbjct: 361 IVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPELESEFSKNHDAITQAFEKREFAHA 416

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL-- 469
           +  +++L  + +++ D  KPW+L K      +   V    + + + L   L+  +P +  
Sbjct: 417 VRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGINMFKVLIAYLKPIIPSIVA 476

Query: 470 -ANKIFDILFVA 480
            A +  +I F++
Sbjct: 477 EAERFLNIQFIS 488


>gi|147766455|emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]
          Length = 652

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 255/566 (45%), Gaps = 73/566 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G      A
Sbjct: 19  KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVLYICGTDEYGTATETKA 78

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + +   D+  +  +++ D  DIS+D+F RT+  +H + C+ ++KK+ +   + + 
Sbjct: 79  MEENCSPQQICDKYHKIHKEVYDWFDISFDEFGRTSIPQHTEVCQAIFKKLMENNWLSEN 138

Query: 123 CYSGWYSLRDEAYYND----------DEVYKGADGQYYN------------------AQH 154
                Y    + +  D          D  Y  A G                       Q 
Sbjct: 139 RMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQS 198

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSR 211
            P Q  + +  F  L   +DKL  Y  +    I     +N +    +++K GL+   ++R
Sbjct: 199 TP-QIRDTDHLFLELPLLKDKLEEYINNMS--IAGCWSQNAIQATYAWLKEGLRSRCITR 255

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 256 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITACY-TPEWEKWWKNPENVDLYQFMGKD 313

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH + +P+ L+    N  L K +    ++ ++  K SKS      GN +   ++  E
Sbjct: 314 NVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDVKDTKIPAE 373

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375
           V     RY+L+       D  +    L+ ++N +L N +GN ++R +S I K     Y  
Sbjct: 374 V----WRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIAKAPGLGYGS 429

Query: 376 MIP-TPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            IP  PGA  ES     ++  +V   L++  E M+   + + L   +S+ SE + Y    
Sbjct: 430 SIPDAPGA--ESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEGNGYLQES 487

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---CFQS 488
           + W+L K +    S V+  +V ++  L+ LL+ F+P  + ++   L +  E R   C ++
Sbjct: 488 QFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDEN 547

Query: 489 --LDQRLKPGFML---HK--TFDPIF 507
             L++  KP  +L   HK  T +P+F
Sbjct: 548 GDLERARKPWELLPAGHKMGTPEPLF 573


>gi|76801248|ref|YP_326256.1| methionyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121724492|sp|Q3IT47|SYM_NATPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76557113|emb|CAI48687.1| methionine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 698

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 218/519 (42%), Gaps = 63/519 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    +  D  AR     G  V F +G+D HG  IA  A   GV 
Sbjct: 13  VTCGLPYANGDLHVGHLRTYVSGDAYARALESLGQSVAFVSGSDMHGTPIAVNAAEEGVD 72

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-ISDKGDIYKGCYSGW 127
            + F  +    + +     +I +D++  T ++ + +  R   +  I D   + K     W
Sbjct: 73  PESFAVEYHEQYEETFPQFNIEFDNYGHTHDETNTEMTRSFVRSWIDDDHVVEKEIEVAW 132

Query: 128 YSLRDEAYYN---------------DDEVYKGA---------DGQYYNAQHNPVQWMEEE 163
            +  D+   +                DE  +G          +        NP ++    
Sbjct: 133 DAEADQPLPDRFVEGTCPYCGEKARGDECDEGCQRHLEPGEIEAPVSTITGNPAEYRTRP 192

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             F RLS +Q+ L         FI  +E     +N+   +++  L+DL ++R   DWGI 
Sbjct: 193 HKFLRLSDFQEYLRG-------FIDRLEGTENAQNQPREWIEGELQDLCITRD-MDWGID 244

Query: 220 IPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------------- 259
            P D        ++YVW+DA   Y+++T       G     W A                
Sbjct: 245 YPADGDESGEDLVLYVWVDAPIEYVSSTKQYSEQVGRDEYDWEAVWKNQVDGVPPEGGEI 304

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H+IG DI++ H ++WPA L  A    P+ V + GF+   G+  S S    +   + IE 
Sbjct: 305 VHIIGHDIIQHHTVFWPAMLRGAGFNEPRAVMACGFVNLDGDAFSTSRNRAVWADDYIES 364

Query: 320 -VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  RY ++       D  +  DGL++R N++L   +GN + RS+    ++Y G   
Sbjct: 365 GLHPDLYRYHIITGSEFTADVDFSWDGLQERTNSELVGTLGNFLYRSLLFAERNYGG--- 421

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
           TP A   SDE + +     + + R  + +  +       + L +  + Y    +PW+L  
Sbjct: 422 TPDAAV-SDE-VRNEIEAAMADFRTAVNDYRVRGLGRAPVELATFGNEYIQRHEPWKLTD 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +P++A  V+   V++ + +A+L +  +P  A  ++D L
Sbjct: 480 DDPEKARQVIRDCVQIAKAIAVLAEPVLPGKAAALWDQL 518


>gi|299538180|ref|ZP_07051465.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726382|gb|EFI66972.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 544

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 217/513 (42%), Gaps = 49/513 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I+  A    
Sbjct: 3   IVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAAQEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            TT+   +     F      L  +YD + RT  + HH++ + L+ ++     +YK     
Sbjct: 63  TTTEAIANHYHDEFTRCFHDLGFTYDLYTRTDAEHHHESVKTLFLQLLANNFLYKKKIEQ 122

Query: 127 WYSLRDEAYYNDDEV--------YKGADGQYYNAQH--NPVQWM--------------EE 162
            Y   D+ +  D  V         K    Q  N     +P+  +              E 
Sbjct: 123 AYCETDKQFLPDRFVEGLCPNCGAKARGDQCDNCSEILDPLDLIDKRCKICGNEPVIRET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERR------NEVISFVKSGLKDLSLSRKTFDW 216
           E ++F  S +Q +L SY          +E+R           ++  G+ D +++R   + 
Sbjct: 183 EHFYFTFSQFQGRLESYLAQ-----AKVEKRWRDNALGLTERYLAEGVPDRAVTRDLPN- 236

Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADL---HVIGKDILR 269
           GI +P  P +    +YVWI+A+  YLT +  +      +    W  +    +V GKD + 
Sbjct: 237 GIDVPV-PGFEGKKIYVWIEAVAGYLTASLKWAKEHQIAIEDLWNEETISYYVHGKDNIP 295

Query: 270 FHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH + WPA L+   +  LP  + S+ ++  +  K+S S    +    ++     D++RYF
Sbjct: 296 FHTVIWPAILMGIGSKALPTHIVSNEYLTLEKRKLSTSQNWAVWVPYILSRYDADSIRYF 355

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       +D  +         N +L    GN V+R++  I K +   +P      E D 
Sbjct: 356 LTMNAPENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFACQVPQ----AEVDS 411

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            I     ++  E    ++     +AL  +   +   +RYFD Q+PW   K N +  +  L
Sbjct: 412 DIRKQTVQLFNEAGVLIEGGHFKQALESIFEYIRRANRYFDEQQPWLQVKENVEAGNRTL 471

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              V +I  L  LL  F+P  A K+ ++L + +
Sbjct: 472 ATCVYIIANLGQLLHPFLPFSAKKVRNMLGINE 504


>gi|225433588|ref|XP_002269672.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 807

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/526 (23%), Positives = 233/526 (44%), Gaps = 45/526 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G    
Sbjct: 19  IQGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATE 78

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+     +++    +IS+D+F RT+  +  + C+ ++KK+ +   +
Sbjct: 79  TKAMEEKCTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLMENNWL 138

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      Y  + + +  D  V      Q  N         E+ G        +D    +
Sbjct: 139 SENVMQQLYCDKCQKFLADRLVEGICPTQDCNYDSARGDQCEKCGKLLNPIELKDPRCKF 198

Query: 180 YESHP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSR 211
             S P          E  L  ++  E I                  +++K GLK   ++R
Sbjct: 199 CHSTPHIRDTNHLFLELPLLKDKLEEYINLMSVAGSWSQNAIQATHAWLKEGLKPRCITR 258

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266
               WG+ +P +     + YVW DA   Y++ T     PD  K    P ++ +   +GKD
Sbjct: 259 D-LKWGVPVPHEKFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPENVELYQFMGKD 316

Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH + +P+ LL  S N  L K +    ++ ++  K SKS G  V         + V+
Sbjct: 317 NVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVE 376

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP- 378
             RY+L+       D  +    L+ ++N++L N +GN ++R +S I K     Y  +IP 
Sbjct: 377 VWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFIAKPAGLGYGSVIPD 436

Query: 379 TPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            PGA   +  +++     R +++  E M+   + + L   +S+ SE + Y    + W+L 
Sbjct: 437 APGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 496

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           K +    S V+  ++ ++  LA LL+ F+P  + ++   L +  E 
Sbjct: 497 KEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPET 542


>gi|21242139|ref|NP_641721.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25009359|sp|Q8PMP0|SYM_XANAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21107551|gb|AAM36257.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 694

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 210/498 (42%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+ +  + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANVQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADL-HVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L     +N +         +L H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGENFEAHLVAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVNADL     NL SR    I K +DG +    A    D +   
Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYD 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V   
Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAALKPILPR 496


>gi|84683791|ref|ZP_01011694.1| methionyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668534|gb|EAQ15001.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 585

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/526 (21%), Positives = 228/526 (43%), Gaps = 49/526 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 16  RVLITSALPYINGIKHLGNLVGSQLPADLYARYMRARGHEVMFICATDEHGTPAELAAAM 75

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G     +  +      ++A    +S+D + R++ +R+H   + L  K+++ G I +   
Sbjct: 76  TGEAVADYCARMHDVQAELAKGFRLSFDHYGRSSSQRNHALTQHLAGKLAENGYIEEVSE 135

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164
              YS  D  +  D  +            +G   +    Q +PV  +E            
Sbjct: 136 EQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPVDLIEPRSAISGSTDLE 195

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  F + SA +D++ ++ +   ++ +      +       GL+D  ++R   DWGI
Sbjct: 196 VRQTKHLFLKQSAMKDEIDAWIDQKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 254

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD-------- 259
            +       P     + YVW DA   Y+  T    +  G       ++W  D        
Sbjct: 255 PVKKGTEDWPGMEGKVFYVWFDAPIEYIAATAEWADATGRSESDWERWWRTDKGADDVRY 314

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 315 VQFMGKDNVPFHTLGFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 374

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  +N DLAN +GN VSR        +   +
Sbjct: 375 EILPADYWRWWLLSHAPENSDAEFTWENFQSSINTDLANVLGNFVSRVTKFCASKFGEAV 434

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E++ ++++  +  ++   + M+   + +A  ++ ++ +  + Y     PW + 
Sbjct: 435 PEGGELGEAERALIADLTARIRSYEKQMEAMEVRKAAQELRAIWAVGNEYLQTAAPWTVF 494

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           KT+PD+A  ++ + + +IR  A++   FVP  A K+   +   D +
Sbjct: 495 KTDPDQAGAIIRLMLNLIRVYAVISAPFVPDAAAKMLSGMNTLDTD 540


>gi|71274586|ref|ZP_00650874.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Dixon]
 gi|71898125|ref|ZP_00680311.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|170730848|ref|YP_001776281.1| methionyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|226710941|sp|B0U472|SYM_XYLFM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71164318|gb|EAO14032.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Dixon]
 gi|71732099|gb|EAO34155.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|167965641|gb|ACA12651.1| methionyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 702

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 225/536 (41%), Gaps = 43/536 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+ 
Sbjct: 18  VTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGMP 77

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A   ++++D +  T    +       +  +   G I     + +
Sbjct: 78  PEAFIATTQASHERDFA-AFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQW-------------MEEE 163
           Y      +  D  V       GA  QY        A ++P +              + + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +FF   A+ D  L ++ S    +  ++ + +     K GL+   +SR    +G +IPD 
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLDAKGGLRPWDISRDAPYFGFEIPDQ 256

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWPA 277
           P    YVW+DA   YL +   L    G       ++       H IGKDI+ FHA++WPA
Sbjct: 257 PGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPA 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACG 336
            L       P ++  +G++   G K+SKS G  I     ++  +  DALRY+   + +  
Sbjct: 317 VLHGTGRCAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSGD 376

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    +      RVNADL   + NL SR  S I   ++G +    A    D        
Sbjct: 377 VDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADILPDRIQYDQFV 432

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEV 454
             L  IR+  +      A+ Q + L  E ++Y D  KPW + K +   A   L+ V  + 
Sbjct: 433 AALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQH--HADAQLHAVCTQG 490

Query: 455 IRQLAILLQAFVPKLAN-KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +    +L+ A  P L +  I    F+A     +Q ++Q L  G  + + + P+F R
Sbjct: 491 LNLFRVLITALKPILPHTSIQAETFLAAPVTTWQDVNQPLTGGHTI-QPYSPLFTR 545


>gi|325929563|ref|ZP_08190677.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540073|gb|EGD11701.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 694

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 210/498 (42%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G        A       H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLVAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVNADL     NL SR    I K +DG +    A  ++D+    
Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKLAD--ALPDADQYDRF 420

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
           V +  L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V   
Sbjct: 421 VAA--LAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAALKPILPR 496


>gi|298205165|emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/526 (23%), Positives = 233/526 (44%), Gaps = 45/526 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G    
Sbjct: 19  IQGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATE 78

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+     +++    +IS+D+F RT+  +  + C+ ++KK+ +   +
Sbjct: 79  TKAMEEKCTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLMENNWL 138

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      Y  + + +  D  V      Q  N         E+ G        +D    +
Sbjct: 139 SENVMQQLYCDKCQKFLADRLVEGICPTQDCNYDSARGDQCEKCGKLLNPIELKDPRCKF 198

Query: 180 YESHP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSR 211
             S P          E  L  ++  E I                  +++K GLK   ++R
Sbjct: 199 CHSTPHIRDTNHLFLELPLLKDKLEEYINLMSVAGSWSQNAIQATHAWLKEGLKPRCITR 258

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266
               WG+ +P +     + YVW DA   Y++ T     PD  K    P ++ +   +GKD
Sbjct: 259 D-LKWGVPVPHEKFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPENVELYQFMGKD 316

Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH + +P+ LL  S N  L K +    ++ ++  K SKS G  V         + V+
Sbjct: 317 NVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVE 376

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP- 378
             RY+L+       D  +    L+ ++N++L N +GN ++R +S I K     Y  +IP 
Sbjct: 377 VWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFIAKPAGLGYGSVIPD 436

Query: 379 TPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            PGA   +  +++     R +++  E M+   + + L   +S+ SE + Y    + W+L 
Sbjct: 437 APGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 496

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           K +    S V+  ++ ++  LA LL+ F+P  + ++   L +  E 
Sbjct: 497 KEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPET 542


>gi|315926518|gb|EFV05900.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 196

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q    + ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQ---TRILKEESYFFKLSKYQDKILQWYEE-KDPI 178

Query: 188 LPIERRNEVISFVKSGLK 205
           LP + +     FV++ LK
Sbjct: 179 LP-KTKKRTYKFVQTALK 195


>gi|167010078|ref|ZP_02275009.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
          Length = 653

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 224/493 (45%), Gaps = 49/493 (9%)

Query: 29  IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS-RNFRDMADVL 87
           I +D+  RF +L G   +F  G+D HG  I   A++ G+T +  V + S R+ +D  D  
Sbjct: 5   IQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQDFTD-F 63

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG--- 144
           +I++D++  T    + +    ++ K+++K  I K   +  Y    + +  D  V KG   
Sbjct: 64  EINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFV-KGTCP 122

Query: 145 ---ADGQY------YNAQHNPVQWME--------------EEGYFFRLSAYQDKLLSYYE 181
              A+ QY        A ++P + +                E +FF L A +  +  + E
Sbjct: 123 KCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIE 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYLT 240
           S+   +L  E  N++  + + GL+   +SR    +G  IP  + Q   YVW+DA   Y+ 
Sbjct: 183 SNT--LLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIPGTNEQKFFYVWLDAPMGYIA 240

Query: 241 T-TGYLDNPDGSKAKFW-----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   Y +  + +   FW      ++L H IGKDI+ FHA++WPA L S     P  VF++
Sbjct: 241 SFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFAN 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNA 352
           GF+   G+K+SKS G  I     ++ +    LRY+    +    D    + +    + N+
Sbjct: 301 GFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           D+   + N+ SR    I K +D  + +   F   D  + S  S+    I +  + +    
Sbjct: 361 DIVGKVVNIASRCAGFIYKKFDATL-SGEIF---DPELESEFSKNHDAITQAFEKREFAH 416

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL- 469
           A+  +++L  + +++ D  KPW+L K      +   V    + + + L   L+  +P + 
Sbjct: 417 AVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGINMFKVLIAYLKPIIPSIV 476

Query: 470 --ANKIFDILFVA 480
               +  +I F++
Sbjct: 477 AETERFLNIQFIS 489


>gi|302876074|ref|YP_003844707.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307686795|ref|ZP_07629241.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578931|gb|ADL52943.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 538

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 221/501 (44%), Gaps = 43/501 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + I  A  Y N   HIGH   ++  DVLAR++R  G +VL+ +G+D HG  I+  A+  G
Sbjct: 3   ILIGGAWPYANGSLHIGHIAALLPGDVLARYYRGKGDNVLYVSGSDCHGTPISIRAKKEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ K   D+    F+   + L+ SYD + RT ++ H    +     + +KG IY+     
Sbjct: 63  VSPKDIADKYHGEFKKCFEKLNFSYDYYGRTDDEFHKKEVQEAILLLYNKGLIYEKEVEQ 122

Query: 127 WYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEG------------ 164
            Y      +  D            + +G       +   P++  E +             
Sbjct: 123 IYCEHCNQFLPDRYVEGVCPKCHSIARGDQCDNCGSLLEPLELSERKCKLCNSEPIVKNA 182

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
              +F LS +Q+ +    +   +    I   N    ++K GL D ++SR     GI IP 
Sbjct: 183 KQLYFSLSKFQNTIKENLDK-TQGNWRINAVNNTERYLKEGLCDRAISR-DLSLGIDIPI 240

Query: 222 ---DDPQYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW---PADLHVIGKDILRFHAI 273
              +D +  +YVWIDA+  YLT +    L+N   S  +FW       +V GKD + FH+I
Sbjct: 241 QGFNDKK--VYVWIDAVLGYLTMSKKWALENKK-SYEEFWDESAISYYVHGKDNIPFHSI 297

Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             PA +       LP+++ S   +  +G+KIS S    +   ++IE    DALRYF +  
Sbjct: 298 ILPALIKGIGYNKLPERIISSEHLTLEGKKISTSNNWAVWVPDIIEAYNSDALRYFFLIN 357

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N +L    GNLV+R++    K ++  IP        D +I  
Sbjct: 358 SPEKRDTDFSFREFVNSNNGELLGAYGNLVNRTLVFAKKYFNNKIPN----GRVDSNIKK 413

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +   I + ++   +  AL ++   +  +++YFD + PW   K + +     +Y  +
Sbjct: 414 EIESLYDLIGKFIEQGNLKVALEKIFEFIRSINKYFDEKTPWITVKDDLEVCGNTIYNCI 473

Query: 453 EVIRQLAILLQAFVPKLANKI 473
             I  LA LL  F+P+ + KI
Sbjct: 474 YSIANLANLLSPFLPESSAKI 494


>gi|289662871|ref|ZP_06484452.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 692

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEGAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDSFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G       +A       H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLRAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVNADL     NL SR    I K +DG +    A    D +   
Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQYD 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V   
Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAALKPILPR 496


>gi|27904607|ref|NP_777733.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396632|sp|Q89AX4|SYM_BUCBP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|27904004|gb|AAO26838.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 545

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 235/533 (44%), Gaps = 56/533 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++++ ++ A  Y N   HIGH  E I AD+  R+ ++ G +V F    D HG  I   +Q
Sbjct: 2   KKRILVTCAFPYANGSLHIGHFLEHIQADIWVRYKKMRGHEVWFICADDAHGTPIMLKSQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +  ++ + F+    ++  +  +  +I+YD++  T    +    + ++  +  KG I    
Sbjct: 62  SLKMSPESFISDIYKDHVNDLEKFNINYDNYYSTHSSENSYFLKKIYHILDKKGLIQT-- 119

Query: 124 YSGWYSLRDEA--YYNDDEVYKGAD----------------GQYYNAQH--NPVQWMEEE 163
               + L D     +  D   KGA                 G  Y+A     PV  +   
Sbjct: 120 -RNIFQLFDNTKRVFLPDRFVKGACPICHTKDQYGDHCEVCGSSYSAVELIKPVSMLSGN 178

Query: 164 G--------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF L  ++  L S+  S    +L      ++  + K GL++  +SR +  
Sbjct: 179 CPILKKSLHFFFNLPYFESMLRSWVMSG---VLQASVVKKLDEWFKLGLREWDISRDSPY 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDIL 268
           +G  IP       YVW+DA   Y++T   L     + +   FW  +        IGKDI+
Sbjct: 236 FGFNIPGFLDKYFYVWLDAPIGYISTFKNLCTQRNNLNFLDFWKKNSECELYQFIGKDIV 295

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WP+ L ++N   P K+F HG +   G K+SKS G+ I     I+ +  D+LRY+
Sbjct: 296 YFHSLFWPSILEASNFRKPTKIFVHGHVTINGLKLSKSRGDCILAKNWIKNLDSDSLRYY 355

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   +D   +      ++N+D+ N I NL SR  S I   ++  +      +  D
Sbjct: 356 YASKLSSKIQDIEVNAKHFLYKINSDVVNKIVNLASRVSSFINIYFNNELS-----SRID 410

Query: 388 ESILSVCSRVLQE---IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
           +  L++  R +     I + ++N   + A++ VISL    + Y D +KPW L K   N +
Sbjct: 411 D--LALYKRFVTSSSYIEKMLENCEFNSAISMVISLADIANSYVDNKKPWNLTKNIKNSN 468

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
               +    + + R L   L+  +P LA      L +  E  N C   L+ ++
Sbjct: 469 TLHDICTTVLNLFRILMTWLKPVMPDLAKNSEKFLNIKLEWANICIPLLNHKI 521


>gi|260575434|ref|ZP_05843433.1| methionyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022354|gb|EEW25651.1| methionyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 572

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 224/512 (43%), Gaps = 53/512 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYCRARGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   + +  +     +++A    +S+D F R++  R+H   +     ++D G I +   
Sbjct: 63  VGKPVEAYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALADNGLIEEVSE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +S+ D  +  D  +            +G   +    Q +P   +             
Sbjct: 123 KQVFSITDNRFLPDRYIEGTCPNCGYTRARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDW 216
             + +  + R  A + KL ++ +S  ++  PI   +    ++  G  L+D  ++R    W
Sbjct: 183 VRQTKHLYLRQRALRGKLEAWIDSKTDW--PILTTSIAKKWLNDGDGLQDRGITRD-LHW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADL----- 260
           G+ +       P     + YVW DA   Y+  T    +    PD +  ++W  DL     
Sbjct: 240 GVPVKRGEADWPGMEGKVFYVWFDAPIEYIAATAEWADAHGLPDAAWQRWWRTDLGADDV 299

Query: 261 ---HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   +
Sbjct: 300 RYVQFMGKDNVPFHTLSFPATIMGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQ 359

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +  +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +  
Sbjct: 360 ALSILPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNLVSRVTKFARAKFGE 419

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P  G+F   +++++   +  L+     MQ   + +A A++ +L    + Y     PW 
Sbjct: 420 TVPAGGSFGPREQALIDDLTSGLRAYEACMQAMEVRKAAAELRALWVAGNEYLQNAAPWT 479

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           + KT+P+ A  ++ + + +IR  A++ Q F+P
Sbjct: 480 VVKTDPEHAQAMVRLALNLIRVYAVISQPFIP 511


>gi|289670254|ref|ZP_06491329.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 692

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEGAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G       +A       H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLRAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVNADL     NL SR    I K +DG +    A    D +   
Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQYD 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V   
Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAALKPILPR 496


>gi|260433994|ref|ZP_05787965.1| methionyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417822|gb|EEX11081.1| methionyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 572

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLIGSQLPADLFARYQRGRGNEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D F R++  ++H   +    K+++ G I +   
Sbjct: 63  AGKPVAEYCAEMHEVQADIAKRFGLSFDHFGRSSSPQNHKLTQHFAGKLAEAGLIREVTE 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
              YS  D  +  D            E  +G   +    Q +P   +             
Sbjct: 123 KQVYSKADGRFLPDRYIEGTCPNCGYEKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLYLRQSAMKDQLDAWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD-------- 259
            +       P     + YVW DA   Y+       +    PD    ++W  D        
Sbjct: 242 PVKKGDEDWPGMEGKVFYVWFDAPIEYIACAKEWADAHGKPDAEWERWWRTDKGADDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           + +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 DILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G + E +++++   ++ ++    +M+   + ++  ++ ++    + Y  A  PW   
Sbjct: 422 PAGGEYGEREQALIEELTKRIRAYEAHMEAMEVRKSAQELRAIWVAGNEYLQAAAPWSTF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           K +P++A+  + + + +IR  A+L   F+P+ + ++   +   D
Sbjct: 482 KEDPEQAAAQVRLGLNLIRLYAVLSAPFIPETSARMLSAMNTLD 525


>gi|166712769|ref|ZP_02243976.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 694

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 209/502 (41%), Gaps = 54/502 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G ++P
Sbjct: 186 EHFFFEVGQFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQMP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP----------DGSKAKFWPADLHVIGKDILRFH 271
             P    YVW+DA   YL +   L             DG++ +      H IGKDI+ FH
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFAAHLVDGTQTELH----HFIGKDIVNFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFL 329
            ++WPA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+ 
Sbjct: 300 GLFWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYF 358

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             + + G D    +      RVNADL     NL SR    I K +DG +    A    D 
Sbjct: 359 AAKSSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDT 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446
           +        L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +
Sbjct: 415 AQYDRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDSADAQLQS 474

Query: 447 VLYVTVEVIRQLAILLQAFVPK 468
           V    + + R L   L+  +P+
Sbjct: 475 VCTQGLNLFRVLVAALKPILPR 496


>gi|315185895|gb|EFU19660.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 719

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 228/516 (44%), Gaps = 56/516 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I++A+ Y N  PH+G+  +++ ADV AR+ R  G + L+  GTDE+G      A 
Sbjct: 2   KKKRLITSALPYVNNVPHLGNLIQVLSADVFARYCRSAGYETLYVCGTDEYGTATETRAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D+      ++ +  +I +D + RT+   H    + ++ K+   G I +  
Sbjct: 62  EEGISPKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIKERT 121

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWM------------ 160
               YS + + +  D  V        Y+ A G   ++     +P + +            
Sbjct: 122 IQQLYSEKSDMFLADRYVRGTCPHCGYEDARGDQCEHCGKLLDPTELIDPRSAIDGSTPV 181

Query: 161 --EEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             E +  +  L A   KL ++ E       +     R  E  S+++ GL++  ++R    
Sbjct: 182 LRETKHLYLDLPALLPKLKAWMEKASVEGRWATNAIRMTE--SWIRDGLRERCITRD-LK 238

Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264
           WG+ +P  P Y   + YVW DA   Y++ T         +  NPD  +          IG
Sbjct: 239 WGVPVPK-PGYENKVFYVWFDAPIGYISITATYTDRWEEWWKNPDEVEL------YQFIG 291

Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH + +P+ LL       L K + S  ++ ++  K SKS G  V         + 
Sbjct: 292 KDNIPFHTVIFPSTLLGTGEEWTLLKTMSSTEYLNYESGKFSKSRGVGVFGNDAKDTGIP 351

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L        D  +     +++VN +L     NLV+R++S I + Y G IP   
Sbjct: 352 ADVWRFYLFYNRPETSDYTFTWKDFQEKVNGELIGNFANLVNRTLSFIHRFYQGRIPE-- 409

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D +       + ++I E ++   +  A   V +L    ++ F A +PW+ +  NP
Sbjct: 410 --APTDTAFWGRVRELEEKITEYLEGAQLRDAFRTVFALSDLGNKAFQAGEPWKTRTENP 467

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + A  +L     ++R LAIL++ ++P  + +I + L
Sbjct: 468 EEAEKLLRHLAYLVRDLAILVEPYLPATSRRILEFL 503


>gi|325921029|ref|ZP_08182910.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548478|gb|EGD19451.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 696

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 207/498 (41%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYSKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G        A       H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLVAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G+++  G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVN+DL     NL SR    I K +DG +    A T  D +   
Sbjct: 363 SGGVDDLDLNLGDFVTRVNSDLVGKFVNLASRCAGFIGKRFDGKL----ADTLPDLAQYE 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                L  IRE  +      A+ Q ++L  E ++Y D  KPW + K     A   +V   
Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAALKPILPR 496


>gi|58581547|ref|YP_200563.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623480|ref|YP_450852.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188577209|ref|YP_001914138.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|68565959|sp|Q5H1J3|SYM_XANOR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123766596|sp|Q2P4E9|SYM_XANOM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710939|sp|B2SRQ4|SYM_XANOP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|58426141|gb|AAW75178.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367420|dbj|BAE68578.1| Methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521661|gb|ACD59606.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 694

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 209/502 (41%), Gaps = 54/502 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIASIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPRSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G ++P
Sbjct: 186 EHFFFEVGQFDGFLHEWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQMP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP----------DGSKAKFWPADLHVIGKDILRFH 271
             P    YVW+DA   YL +   L             DG++ +      H IGKDI+ FH
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFAAHLVDGTQTELH----HFIGKDIVNFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFL 329
            ++WPA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+ 
Sbjct: 300 GLFWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYF 358

Query: 330 VREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             + + G D    +      RVNADL     NL SR    I K +DG +    A    D 
Sbjct: 359 AAKSSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDA 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--ST 446
           +        L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +
Sbjct: 415 AQYDRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDSADAQLQS 474

Query: 447 VLYVTVEVIRQLAILLQAFVPK 468
           V    + + R L   L+  +P+
Sbjct: 475 VCTQGLNLFRVLVAALKPILPR 496


>gi|86136378|ref|ZP_01054957.1| methionyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85827252|gb|EAQ47448.1| methionyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 575

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/531 (22%), Positives = 225/531 (42%), Gaps = 49/531 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    ++ I++AI Y N   H+G+     + AD+ ARF R  G +V+F   TDEHG    
Sbjct: 1   MDGMARILITSAIPYINGIKHLGNLVGSQLPADLYARFQRATGNEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG   + F  +      D+A    +S+D F R++  ++H   +    K+++ G I
Sbjct: 61  LAAAKAGQPVEEFCAEMHEVQADIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
            +   S  YS  D  +  D            E  +G   +    Q +P   +        
Sbjct: 121 REVDDSQIYSHADGRFLPDRYVEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISG 180

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                       F   S  +D+L ++  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRATKHLFLCQSQMKDQLDAWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADL-- 260
            DWGI +       P     + YVW DA   Y+   G     +G       ++W  D+  
Sbjct: 240 LDWGIPVKKGTEDWPGMEGKVFYVWFDAPIEYIAAAGEWAEANGKTDADWQRWWRTDMGA 299

Query: 261 ------HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                   +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  I 
Sbjct: 300 DDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGIF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWEQFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P    +   ++++++  +  ++   ++M+N  + ++  ++ ++    + Y  +  
Sbjct: 420 FGEAVPESAPYGAPEQALIADLTSRIRAYEQHMENMEVRKSAQELRAIWVAGNEYLQSTA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           PW   KT+P  A+T + + + +IR  A+L   F+P  +  +   L   D +
Sbjct: 480 PWATFKTDPQLAATQVRLGLNLIRLYAVLSSPFIPNASEVLMQALNCDDRS 530


>gi|294665009|ref|ZP_06730318.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605228|gb|EFF48570.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 694

 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 209/497 (42%), Gaps = 44/497 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+ +  + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANVQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLDAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPRSVISGAKPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF +  + D  L  + +    +  ++ + +     + GL+   +SR    +G +IP 
Sbjct: 186 EHFFFEVGHF-DGFLRQWLAGDVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIPG 244

Query: 223 DPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADL-HVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L     ++ D         +L H IGKDI+ FH ++WP
Sbjct: 245 QPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDAHLVAGTQTELHHFIGKDIVNFHGLFWP 304

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334
           A L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + +
Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKSS 363

Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            G D    +      RVNADL     NL SR    I K +DG +    A    D +    
Sbjct: 364 GGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYDR 419

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
               L  IRE  +      A+ Q + L  E ++Y D  KPW + K +   A   +V    
Sbjct: 420 FVAALAPIREAYERNDAASAIRQTMELADEANKYIDDTKPWVIAKQDGADAQLQSVCTQG 479

Query: 452 VEVIRQLAILLQAFVPK 468
           + + R L   L+  +P+
Sbjct: 480 LNLFRILVAALKPILPR 496


>gi|326511433|dbj|BAJ87730.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 798

 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 242/531 (45%), Gaps = 54/531 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 16  RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+     + C+ ++ K+ +   + + 
Sbjct: 76  LEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTEN 135

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164
                Y    E +  D  V          Y+ A G Q  N     NP + ++ +      
Sbjct: 136 TMQQLYCDTCERFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 195

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212
                     F  L    DKL++Y  +    +  +  +N + +   ++K GLK   ++R 
Sbjct: 196 APRIRDTDHLFLELPLLSDKLVNYINNTS--VAGMWSQNAIQATNAWLKEGLKQRCITRD 253

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265
              WG+ +P +     + YVW DA   Y++ T     PD  K  +W  P ++ +   +GK
Sbjct: 254 -LKWGVPVPHEKYKDKVFYVWFDAPIGYISITASY-TPDWEK--WWKDPDNVELFQFMGK 309

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH + +P+ LL    N  + K +    ++ ++  K SKS G  V      +  +  
Sbjct: 310 DNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKVTNIPS 369

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378
           +  RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +IP
Sbjct: 370 EVWRYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIIP 429

Query: 379 -TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             P A + +  S L+   ++ +++  E M+   + + L   +++ S+ + Y    + W L
Sbjct: 430 DAPNAESHTLTSALAEKTNKWVEQYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRL 489

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486
            K +P   + V+  +V V+  LA LL+ F+P  + ++   L ++ DE+  F
Sbjct: 490 YKEDPAACAIVMKTSVGVVYLLACLLEPFMPSFSREVLRQLNMSPDEDLSF 540


>gi|78046997|ref|YP_363172.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123757531|sp|Q3BVP1|SYM_XANC5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78035427|emb|CAJ23072.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 694

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 206/498 (41%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G        A       H IGKDI+ FH ++W
Sbjct: 244 GQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLVAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVNADL     NL SR    I K +DG +    A    D +   
Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYD 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V   
Sbjct: 419 RFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAALKPILPR 496


>gi|294626909|ref|ZP_06705500.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598769|gb|EFF42915.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 691

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 207/497 (41%), Gaps = 44/497 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+ +  + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANVQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYAKLDAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDTAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF +  + D  L  + +    +  ++ + +     + GL+   +SR    +G +IP 
Sbjct: 186 EHFFFEVGHF-DGFLRQWLAGDVALPGVKAKLKEWLDAEGGLRAWDISRDAPYFGFQIPG 244

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L    G        A       H IGKDI+ FH ++WP
Sbjct: 245 QPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLVAGTQTELHHFIGKDIVNFHGLFWP 304

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIA 334
           A L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + +
Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKSS 363

Query: 335 CGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            G D    +      RVNADL     NL SR    I K +DG +    A    D +    
Sbjct: 364 GGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQYDR 419

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
               L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V    
Sbjct: 420 FVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQG 479

Query: 452 VEVIRQLAILLQAFVPK 468
           + + R L   L+  +P+
Sbjct: 480 LNLFRILVAALKPILPR 496


>gi|329119551|ref|ZP_08248235.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464338|gb|EGF10639.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 691

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 222/520 (42%), Gaps = 55/520 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K+ +++A+ Y N   H+GH  E I  D+  RF +L G D  +    D HG  +  
Sbjct: 1   MTQKRKILVTSALPYANGSIHLGHMVEHIQTDIWVRFQKLRGHDCRYCCADDTHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AAQ   V  +  + +    +  D    L I YD++  T    + +    ++  +   G I
Sbjct: 61  AAQKQDVQPEDMIARVREEHLADFTGFL-IGYDNYYSTHSPENKELSEKIYLALKANGKI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWM-------- 160
                   +      +  D  V             G + +     ++P + +        
Sbjct: 120 ESRTIEQLFDPEKHMFLPDRFVKGECPKCHAADQYGDNCEVCGTTYSPTELIKPYSAVSG 179

Query: 161 ------EEEGYFFRLSAYQDKLLSYY-------ESHPEFILPIERRNEVISFV----KSG 203
                 E E +FF+L    D L  +        +   +  L  E  N++  ++    ++ 
Sbjct: 180 ATPVLKESEHFFFKLGKCADYLKQWTAGSTTLPDGREQPHLQPEALNKMNEWLGKDGETT 239

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD--- 259
           L D  +SR    +G +IP  P    YVW+DA   Y+ +   L    G +   ++  D   
Sbjct: 240 LSDWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYMASFKNLCARAGIEFDDYFRTDSDT 299

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  VF+HGF+   G+K+SKS G  I     +
Sbjct: 300 EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVFAHGFLTVDGQKMSKSRGTFITAKSYL 359

Query: 318 EE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 360 EQKLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 419

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +        S  ++L   +   + I    + +   RAL  +++L   V+ Y DA KPWE
Sbjct: 420 SLKDV-----SGSALLKKLAAESETIAAAYEEREYARALRDIMALADAVNEYTDANKPWE 474

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAIL---LQAFVPKLANK 472
           L K    +   +  V  E+I   A+L   L   +P++A +
Sbjct: 475 LAK-QAGQEVRLHEVCSELINAFAVLSVYLAPVLPRVAEQ 513


>gi|285019248|ref|YP_003376959.1| methionyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474466|emb|CBA16967.1| probable methionyl-trna synthetase protein [Xanthomonas
           albilineans]
          Length = 686

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 213/498 (42%), Gaps = 48/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLHGDRAWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    +       + ++   G I +   + +
Sbjct: 67  AEDFIASIQASHERDFA-AFGVAFDHYDSTNSAANRALTEAFYARLDAGGHIARRRVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGTTPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS--GLKDLSLSRKTFDWGIKI 220
           E +FF +  +   L  +     +  LP   + +++ ++ S  GL+   +SR    +G +I
Sbjct: 186 EHFFFEVGRFDRFLRDWLAG--DVALP-GVKAKLMEWLDSEGGLRAWDISRDAPYFGFQI 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPADLH-VIGKDILRFHAIY 274
           P  P    YVW+DA   YL++   L     ++ +   A     +LH  IGKDI+ FH ++
Sbjct: 243 PGQPGKYFYVWLDAPIGYLSSFQTLCARLGESFEAHLAAGSSTELHHFIGKDIVNFHGLF 302

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVRE 332
           WPA L       P ++  +G++   G K+SKS G  +     + +VG+  +ALRY+   +
Sbjct: 303 WPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTYL-DVGLEPEALRYYFAAK 361

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
            + G D    +      RVNADL     NL SR    I K + G +    A T  D +  
Sbjct: 362 SSGGVDDLDLNLSDFIARVNADLVGKFVNLASRCAGFIDKRFGGTL----AETLPDPAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449
           +     L  IRE         A+ Q ++L  E ++Y D  KPW L K +   AS   V  
Sbjct: 418 AHFVAALSPIREAYARNDPASAIRQTMALADEANKYIDEHKPWVLAKQDGAEASLQAVCT 477

Query: 450 VTVEVIRQLAILLQAFVP 467
             + + R LA  L+  +P
Sbjct: 478 QGLNLFRVLAAALKPVLP 495


>gi|294630424|ref|ZP_06708984.1| methionyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833757|gb|EFF92106.1| methionyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 571

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 231/529 (43%), Gaps = 49/529 (9%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+  G+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKEQGI 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D   +++D F R++ +++H+  + + +++   G I +      
Sbjct: 66  PVAEFCAQAHDAQKAIYDGFSLAFDHFGRSSSRQNHEITQEIARELKANGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181
           YS  D  +  D  +     + G D    +   N  + ++        SA      L   E
Sbjct: 126 YSNADGRFLPDRYIIGTCPHCGYDKARGDQCENCTRVLDPTDLIEPRSAISGSADLEIRE 185

Query: 182 SHPEFILPIERRNEVISFV-------------------KSGLKDLSLSRKTFDWGIKIPD 222
           +   F+L      EV ++V                     GL D +++R   DWG+ +P 
Sbjct: 186 TKHLFLLQSTLAGEVEAWVDERADDWPVLASSIARKWLTEGLHDRAITRD-LDWGVPVPA 244

Query: 223 DP-------QYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPADLHV-----IGKD 266
           D          + YVW DA   Y+ +T      D      ++ +W +D  V     +GKD
Sbjct: 245 DTWPDLAAEGKVFYVWFDAPIEYIGSTKEWAELDPENRDWRSWWWESDADVRYTQFMGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            + FH++ +PA LL    P  K    K F+  ++ + G K S S    +   + +E +  
Sbjct: 305 NVPFHSVMFPATLLGTRAPWKKVDVIKAFN--WLNYYGGKFSTSQHRGVFTHDALEILPA 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RYF++       D  +  +     VN DLA+ +GN V+R +S   K +   +P  G 
Sbjct: 363 DYWRYFMMANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPQGGE 422

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E++  + +  +R+L E  E M+     +A A + +L S  + Y + + PW   KT+ D
Sbjct: 423 PGEAEAKLGAEIARLLAEYEEQMEAIQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDKD 482

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            A+  L   + +I   A++ + F+P  A  +     + D+   + S D+
Sbjct: 483 GAALTLRTAMNLIHLYAVVSEPFIPTTAKAMRSAFALPDDTATWVSADE 531


>gi|238785448|ref|ZP_04629433.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713653|gb|EEQ05680.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 635

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 207/469 (44%), Gaps = 44/469 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY---- 149
             + +   +++ ++   G I     S  Y   ++  +  D   KG      A  QY    
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNC 119

Query: 150 --YNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
               A ++P + +              E + +FF L A+ + L ++  S     L  +  
Sbjct: 120 EVCGATYSPTELIDPKSAVSGATPVMRESKHFFFDLPAFSEMLQAWTRSG---ALQEQVA 176

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           N++  + +SGL+   ++R    +G ++PD P    YVW+DA   Y+     L +  G   
Sbjct: 177 NKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLD 236

Query: 254 --KFW----PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +FW      DL H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS
Sbjct: 237 FDEFWREGAETDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKS 296

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRS 365
            G  I     ++ +  D LRY+   +++   D    + +   +RVNAD+ N + NL SR+
Sbjct: 297 RGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 356

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I K + G +    A   +D ++    +     I +   ++   +A+ ++++L    +
Sbjct: 357 AGFINKRFAGKL----ADQLADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVAN 412

Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           RY D Q PW + K     A    +  + + + R L   L+  +P L  +
Sbjct: 413 RYIDEQAPWVVAKEEGRDAELQAICSMGINLFRVLMTYLKPVLPSLNER 461


>gi|225463876|ref|XP_002268996.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296081059|emb|CBI18340.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 255/566 (45%), Gaps = 73/566 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G      A
Sbjct: 18  KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVLYICGTDEYGTATETKA 77

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + +   D+  +  +++ D   IS+D+F RT+  +H + C+ ++KK+ +   + + 
Sbjct: 78  MEENCSPQQICDKYHKIHKEVYDWFGISFDEFGRTSTPQHTEVCQAIFKKLMENNWLSEN 137

Query: 123 CYSGWYSLRDEAYYND----------DEVYKGADGQYYN------------------AQH 154
                Y    + +  D          D  Y  A G                       Q 
Sbjct: 138 RMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQS 197

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSR 211
           +P Q  + +  F  L   +DKL  Y  +    I     +N +    +++K GL+   ++R
Sbjct: 198 SP-QIRDTDHLFLELPLLKDKLEEYINNMS--IAGCWSQNAIQATYAWLKEGLRSRCITR 254

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 255 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITACY-TPEWEKWWKNPENVDLYQFMGKD 312

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH + +P+ L+    N  L K +    ++ ++  K SKS      GN +   ++  E
Sbjct: 313 NVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDVKDTKIPAE 372

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375
           V     RY+L+       D  +    L+ ++N +L N +GN ++R +S I K     Y  
Sbjct: 373 V----WRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIAKAPGLGYGS 428

Query: 376 MIP-TPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            IP  PGA  ES     ++  +V   L++  E M+   + + L   +S+ SE + Y    
Sbjct: 429 SIPDAPGA--ESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEGNGYLQES 486

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---CFQS 488
           + W+L K +    S V+  +V ++  L+ LL+ F+P  + ++   L +  E R   C ++
Sbjct: 487 QFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDEN 546

Query: 489 --LDQRLKPGFML---HK--TFDPIF 507
             L++  KP  +L   HK  T +P+F
Sbjct: 547 GDLERARKPWELLPAGHKMGTPEPLF 572


>gi|55378546|ref|YP_136396.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68565966|sp|Q5V1B3|SYM_HALMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55231271|gb|AAV46690.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 717

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 218/529 (41%), Gaps = 75/529 (14%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    +  D L+R  R  G    F +G+D HG  +A  A   GV 
Sbjct: 14  VTCGLPYANGDLHVGHLRTYVDGDALSRALRRIGQQTAFVSGSDMHGTPVAVNAAEEGVA 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR------------------HHDTCRILW 110
            + F       + +     +I +D++  T ++                   H     + W
Sbjct: 74  PREFALDFHETYAETFPQFNIEFDNYGHTDDETNVELTQEFVRSWVENDHVHEKEIEVAW 133

Query: 111 KKISDKG--DIY--KGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWM 160
               D+   D Y    C Y G  +  DE    D+   +  +     A       NP ++ 
Sbjct: 134 DTEEDQPLPDRYVEGTCPYCGEQARGDEC---DEGCQRHLEPGEIEAPVSTLTGNPAEYR 190

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E  F RL+ +Q+ L  + +           +N+   +++  L+DL ++R   DWG+  
Sbjct: 191 TREHKFLRLADFQEYLQGFLDR---LEGTDNAQNQPREWIEGELQDLCITRD-MDWGVDY 246

Query: 221 PDD----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----------------- 259
           P+D     + ++YVW+DA   Y+ +T       G     W A                  
Sbjct: 247 PEDVDGGDELVLYVWVDAPIEYVASTKQYTERVGDDEYDWEAVWKIDSEERHGTEWDDEW 306

Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
                  +HVIG+DI++ HA++WPA L  A    P+ + + GF+   G  +S S    + 
Sbjct: 307 ADDSGEIIHVIGRDIIQHHAVFWPAMLRGAGYNEPRSILATGFVGIDGNALSTSRNRAVW 366

Query: 313 PIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
             E ++     D  RY++        D  +  D  ++RVN +L   +GN + RS+    +
Sbjct: 367 ADEYLDAGFHPDLFRYYIATGAQIDTDVDFSWDRFQERVNGELVGNVGNFIYRSLLFAER 426

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIR--ENMQNQLIHRALAQV-ISLVSEVDRYF 428
           +YDG   TP A    D     V  R+   I   E    +   R LA++ I L +  + Y 
Sbjct: 427 NYDG---TPDAAVSDD-----VRGRIEDAIADFEAAVREYDIRELAEIAIELSNYGNEYI 478

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +PW L   +P+ A  V+   V++ + +A+L+Q  +P  A +++  L
Sbjct: 479 QRNEPWNLVDDDPEEAEQVIRDCVQLTKAVAVLMQPVLPGKAERLWGQL 527


>gi|153873508|ref|ZP_02002069.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152070026|gb|EDN67931.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 398

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 175/399 (43%), Gaps = 38/399 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R+ L +++A+ Y N   HIGH  E I  D+  RF +L G    +    D HG  I  
Sbjct: 1   MTTRQIL-VTSALPYANGPIHIGHLVEYIQTDIWVRFQKLRGHTCYYVCADDAHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AQ  G+T +  + + S   + D AD   I +D++  T    +    +++++ +   G I
Sbjct: 60  KAQKEGITPEELITRYSTEHQADFAD-FAIGFDNYYSTHSSENEHFSQLIYQGLKTAGHI 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQY----------YNAQH--NPVQWM-- 160
            +     +Y    E +  D  +       GA  QY          YN     NPV  +  
Sbjct: 119 ERRTIRQFYDPIKEMFLPDRFIRGECPNCGAKDQYGDSCEVCSKTYNPTELKNPVSAVSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E  F  LS ++  L  +  S+    L    R+++  +  SGL+   +SR   
Sbjct: 179 ATPVEKESEHLFVNLSDFETMLQEWIGSNA---LQPAVRHKLNEWFDSGLQAWDISRDAP 235

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IPD+P    YVW+DA   Y+ +   L D        FW  D      H IGKDI 
Sbjct: 236 YFGFEIPDEPGKYFYVWLDAPIGYMASFKQLCDQKQIDFNAFWQKDSQAEVYHFIGKDIQ 295

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L +     P  VF HGF+   G+K+SK+ G  I     +  +  + LRY+
Sbjct: 296 YFHCLFWPAMLTAGGFRKPTAVFVHGFLKVDGQKMSKTRGTFISARTYLNHLQPEYLRYY 355

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSV 366
              ++  G D    + +   +RVNADL     N+ SR  
Sbjct: 356 FAAKLGDGVDDIDLNLEDFVQRVNADLVGKFVNIASRCA 394


>gi|159040724|ref|YP_001539976.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|187647711|sp|A8MA54|SYM_CALMQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157919559|gb|ABW00986.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 582

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 46/507 (9%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           + +A  Y  A PH+G+    ++ ADV  R+ +L G DV+F TG+DEHG  I   A   G+
Sbjct: 19  VGSAWPYIYAVPHLGNLIGSLLSADVFTRYLKLKGYDVVFVTGSDEHGTPIEVEAIKLGI 78

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             +   D+       +  +  I  D++ RT  + H    R  + KI + G I+       
Sbjct: 79  EPRQLTDRMHEIIVKLLKLWGIEPDNYTRTESEVHKWYVRDAFTKIYNNGYIFTKDDELP 138

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP--------VQWMEE 162
           Y  RD+ +  D  V        Y  A G Q  N           NP         +W   
Sbjct: 139 YCPRDKIFLPDRFVIGTCPYCGYPYARGDQCENCGRLLEPRMLINPKCAICGSTPEWRLT 198

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--I 220
             ++  L   +D++ SY E +    LP   +   +  +K GL+  +++R    WGI    
Sbjct: 199 RHWYLDLRRLEDRIRSYIEGNSA--LPDNAKQMSLGILKEGLRPRAITRDN-KWGIPAPF 255

Query: 221 PDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW----PADLHVIGKDILRFHA 272
           P      +YVW +A+  Y++ T      L   D  + +FW       +  IGKD + FH 
Sbjct: 256 PGAEGKTIYVWFEAVLGYVSATIEYFRRLGREDDWR-RFWFNKGTRVVFFIGKDNIPFHT 314

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I +PA L++   +  +P    S  +++ +G+K SKS    I   E I  +  D  R++L+
Sbjct: 315 IIFPALLMATGEDYVMPWTTSSTEYLIFEGKKFSKSQRVGIWADEAIALLPADYWRFYLI 374

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +  D     VN+ + + +GN + R +++  + + G +P      E D+ I
Sbjct: 375 YNRPEQRDSNFTWDSFLDVVNSIMNDTVGNFIHRVLTLAKRRW-GTVPGDVKMIEQDQEI 433

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 +L  + E+ +  ++  A++Q I +    ++Y + ++PW L +   + A   +Y+
Sbjct: 434 YGKVLEILNTVEEDYERIMLKDAVSQSIEIARIGNKYLNERQPWRLSEVEFNSA---IYM 490

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +++ L+I L   +P   N+++ ++
Sbjct: 491 LMSIVKTLSITLAPVIPFSINELWRMM 517


>gi|109940177|sp|Q9ZTS1|SYM_ORYSJ RecName: Full=Probable methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54290977|dbj|BAD61657.1| methionyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|222635658|gb|EEE65790.1| hypothetical protein OsJ_21495 [Oryza sativa Japonica Group]
          Length = 801

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 235/520 (45%), Gaps = 57/520 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +V++  GTDE+G      A
Sbjct: 15  RRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETKA 74

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + + 
Sbjct: 75  MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 134

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164
                Y    + +  D  V          Y+ A G Q  N     NP + ++ +      
Sbjct: 135 TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 194

Query: 165 ---------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     F  L    DKL++Y  E+    +          +++K GLK   ++R   
Sbjct: 195 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 253

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG+ +P +     + YVW DA   Y++ T     PD  K  +W  P ++ +   +GKD 
Sbjct: 254 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDN 310

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEV 320
           + FH + +P+ LL       + K +    ++ ++  K SKS      GN      +  EV
Sbjct: 311 VPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV 370

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376
                RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +
Sbjct: 371 ----WRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSI 426

Query: 377 IP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P  P A +    ++++   ++ +++  E M+   + + L   + + S+ + Y    + W
Sbjct: 427 VPDAPNAESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFW 486

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +L K +P   + V+  +V V+  LA LL+ F+P  +N++ 
Sbjct: 487 KLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVL 526


>gi|126735051|ref|ZP_01750797.1| methionyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715606|gb|EBA12471.1| methionyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 572

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 225/521 (43%), Gaps = 47/521 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  A  
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRQRGHEVLFLCATDEHGTPAELAAAKASK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +AD   +S+D F R++  ++H   +    +++D G I +      
Sbjct: 66  PVAEYCAEMHGIQAKIADGFRLSFDHFGRSSSPQNHKLTQAFAMRLADVGLIKEVTEEQV 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------------E 161
           YS+ D  +  D            E  +G        Q +P   +               E
Sbjct: 126 YSVADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPADLIDAHSTISGSTELEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            +  + R S  +D L ++ +S  ++ +      +       GL+D  ++R   DWGI + 
Sbjct: 186 TKHLYLRQSELKDDLAAWIDSKTDWPILTTSIAKKWLTDGDGLQDRGITRD-LDWGIPVK 244

Query: 222 DDPQY-------IMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264
              Q        + YVW DA   Y+     + D   G+  A++W  D           +G
Sbjct: 245 QGDQTWPGMEGKVFYVWFDAPIEYIACAQEWEDAGKGTDWARWWRTDKGADDVTYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +E +  
Sbjct: 305 KDNVPFHTLSFPATILGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALELLPA 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P  GA
Sbjct: 365 DYWRWWLLSHAPESSDAEFTWENFQTDVNKDLADVLGNFVSRITKFCRSKFSEAVPEGGA 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           +  ++E +++  +  ++    +M    + ++ A++ ++    + Y  A  PW   KT+P+
Sbjct: 425 YGPAEEQLIADLTTRIRAYEGHMDAMEVRKSAAELRAIWVLGNEYLQANAPWTTFKTDPE 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            A+  + + + +IR  A+L  AF+P  +  + D +   D++
Sbjct: 485 TAAMQVRLALNLIRIYAVLSAAFIPDASKTMIDAMQTDDDS 525


>gi|318604995|emb|CBY26493.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 616

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 199/447 (44%), Gaps = 44/447 (9%)

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I  
Sbjct: 4   AQQLGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKN 63

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWM--------- 160
              S  Y   ++  +  D   KG             + +   A ++P + +         
Sbjct: 64  RTISQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGA 122

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   +SR    
Sbjct: 123 TPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPY 179

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW----PADL-HVIGKDIL 268
           +G +IPD P    YVW+DA   Y+     L +  G     +FW     ADL H IGKDI+
Sbjct: 180 FGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIV 239

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+
Sbjct: 240 YFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYY 299

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D
Sbjct: 300 YAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLAD 355

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
            ++    +     I +   N+   +A+ ++++L    +RY D Q PW + K     A   
Sbjct: 356 PALYKTFTDAATSIADTYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQ 415

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  + + + R L   L+  +P L  +
Sbjct: 416 AICSMGINLFRVLMTYLKPVLPALTER 442


>gi|294813511|ref|ZP_06772154.1| Methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326110|gb|EFG07753.1| Methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 579

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ AD  +R+ R  G DVL+   TDEHG     AA+ AG+
Sbjct: 11  ITSALPYINGIKHLGNMVGSMLPADAYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGL 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           +   F  Q     + + D  ++++D F R++ +++ +  +   +K+ + G I +      
Sbjct: 71  SVAEFCAQAHVAQKAVYDGFELAFDYFGRSSSQQNSEITQHFARKLHENGFIEERAIRQV 130

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181
           YS  D  +  D  V     Y G D    +   N  + ++        SA      L   E
Sbjct: 131 YSPADGRFLPDRYVVGTCPYCGYDKARGDQCENCTRVLDPTDLVNPRSAISGSTDLEVRE 190

Query: 182 SHPEFILPIERRNEVISFVKS-------------------GLKDLSLSRKTFDWGIKIPD 222
           +   F+L  + + EV  ++ S                   GL D +++R   DWGI +P 
Sbjct: 191 TKHLFLLQSKLQREVEEWIDSVSAQWPQLSTSIARKWLTEGLHDRAITRD-LDWGIPVPA 249

Query: 223 DP-------QYIMYVWIDALTNYLTTTGYLDN--PDGS----KAKFWPADLHV-----IG 264
           D          + YVW DA   Y+  T    +  PDG     K+ ++ AD  V     + 
Sbjct: 250 DTWPDLAAEGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWYEADDTVHYSQFMA 309

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA  L    P  K     GF  + + G K S S    +     +E +  
Sbjct: 310 KDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTYYGGKFSTSQKRGVFTDAALETLPG 369

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P    
Sbjct: 370 DYWRYFLLANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPEGNH 429

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E++  +    +R+L E  E+M+     +A A + +L S  + Y + + PW   KT+PD
Sbjct: 430 AGEAEAKLGEELARLLAEYEEHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDPD 489

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470
            A+  L   + +I   AI+ + F+P  A
Sbjct: 490 GAALTLRTAMNLIHLYAIVSEPFIPATA 517


>gi|254390056|ref|ZP_05005277.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442082|ref|ZP_08216816.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197703764|gb|EDY49576.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 574

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 222/508 (43%), Gaps = 47/508 (9%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ AD  +R+ R  G DVL+   TDEHG     AA+ AG+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADAYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           +   F  Q     + + D  ++++D F R++ +++ +  +   +K+ + G I +      
Sbjct: 66  SVAEFCAQAHVAQKAVYDGFELAFDYFGRSSSQQNSEITQHFARKLHENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181
           YS  D  +  D  V     Y G D    +   N  + ++        SA      L   E
Sbjct: 126 YSPADGRFLPDRYVVGTCPYCGYDKARGDQCENCTRVLDPTDLVNPRSAISGSTDLEVRE 185

Query: 182 SHPEFILPIERRNEVISFVKS-------------------GLKDLSLSRKTFDWGIKIPD 222
           +   F+L  + + EV  ++ S                   GL D +++R   DWGI +P 
Sbjct: 186 TKHLFLLQSKLQREVEEWIDSVSAQWPQLSTSIARKWLTEGLHDRAITRD-LDWGIPVPA 244

Query: 223 DP-------QYIMYVWIDALTNYLTTTGYLDN--PDGS----KAKFWPADLHV-----IG 264
           D          + YVW DA   Y+  T    +  PDG     K+ ++ AD  V     + 
Sbjct: 245 DTWPDLAAEGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWYEADDTVHYSQFMA 304

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA  L    P  K     GF  + + G K S S    +     +E +  
Sbjct: 305 KDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTYYGGKFSTSQKRGVFTDAALETLPG 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P    
Sbjct: 365 DYWRYFLLANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPEGNH 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E++  +    +R+L E  E+M+     +A A + +L S  + Y + + PW   KT+PD
Sbjct: 425 AGEAEAKLGEELARLLAEYEEHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDPD 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLA 470
            A+  L   + +I   AI+ + F+P  A
Sbjct: 485 GAALTLRTAMNLIHLYAIVSEPFIPATA 512


>gi|221639859|ref|YP_002526121.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782870|sp|B9KKH3|SYM_RHOSK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221160640|gb|ACM01620.1| Methionyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 572

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +     +++A    +S+D F R++  R+H   +     +++ G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNP---------------VQ 158
             ++S+ D  +  D  +            +G   +    Q +P               ++
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+  E +  +++   + L      M+   + +A A++ +L    + Y  +  PW + 
Sbjct: 422 PAGGSPGEREHQLVAELQQQLAAYETCMEAMEVRKAAAELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+P++A  ++ + + +IR  A++ + F+P  A  +   L   D
Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCED 525


>gi|167386989|ref|XP_001737980.1| methionine-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165899002|gb|EDR25712.1| methionine-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 753

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 233/507 (45%), Gaps = 47/507 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G     ++ ADV AR+ R+ G + L+  GTDE+G    + A   
Sbjct: 16  ILITSALPYCNNVPHLGTLIGCVLSADVYARYCRMRGYNTLYVCGTDEYGTTTEQKALLE 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T +   D+     +++ D  DIS++ F RT+ ++  +  + ++K +++ G IYK    
Sbjct: 76  HCTPQEICDKYYTLHKEVYDWFDISFNYFGRTSTEKQTEITQDIFKHLNNNGYIYKESVE 135

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
            +Y  + + +  D  V          GA G   ++    +  +E                
Sbjct: 136 QFYCEKCDKFLADRFVEGICPFCNAPGARGDQCDSCQKLINTVELINPQCKVCHSVPVRR 195

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGI 218
             E  F  L   QDKL ++     E +   E  N      K+ L +L     T D  WG 
Sbjct: 196 SSEHLFIDLPKLQDKLGNWAN---ETMSKYEWPNNCACATKTWLNNLKGRCITRDLKWGT 252

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270
           K+P +     + YVW DA   YL+ T  Y D+      K+W  + HV     +GKD + F
Sbjct: 253 KVPLEGFENKVFYVWFDAPIGYLSITANYTDD----WKKWWMDNEHVELTQFLGKDNIVF 308

Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H++ +P+ LL    P  + +K+ +  ++ ++  K SKS G  +   + ++  +  +  RY
Sbjct: 309 HSVLFPSTLLGTGQPWTMVRKLATTEYLNYEDCKFSKSNGTGVFGDDAMKTGIPPEVWRY 368

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTES 386
           +L+       D  +  + L ++ N +L   IGNL  R+++  +K++D  IP      TE 
Sbjct: 369 YLLINRPEQSDTVFLWNDLMEKNNNELLKNIGNLAQRTLTFAVKNFDNKIPKKINKITEV 428

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           + +       + +E    M+N  +   L   +S+ S  ++Y      W+  K++ +RA+ 
Sbjct: 429 ELNCEKEIKELYKEYLNAMENVKLKEGLKIAMSISSVGNKYLQDTAAWKTIKSDKERAAD 488

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
            +Y  + ++  ++++L  ++P+   K+
Sbjct: 489 EIYYALNILYFVSLVLDPYIPEFGKKV 515


>gi|218198281|gb|EEC80708.1| hypothetical protein OsI_23153 [Oryza sativa Indica Group]
          Length = 804

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 234/520 (45%), Gaps = 57/520 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +V++  GTDE+G      A
Sbjct: 18  RRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETKA 77

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + + 
Sbjct: 78  MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 137

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164
                Y    + +  D  V          Y+ A G Q  N     NP + ++ +      
Sbjct: 138 TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 197

Query: 165 ---------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     F  L    DKL++Y  E+    +          +++K GLK   ++R   
Sbjct: 198 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 256

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG+ +P +     + YVW DA   Y++ T     PD  K  +W  P ++ +   +GKD 
Sbjct: 257 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDN 313

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEV 320
           + FH + +P+ LL       + K +    ++ ++  K SKS      GN      +  EV
Sbjct: 314 VPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV 373

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376
                RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +
Sbjct: 374 ----WRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSI 429

Query: 377 IP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P  P A +    +++    ++ +++  E M+   + + L   + + S+ + Y    + W
Sbjct: 430 VPDAPNAESHPLTKALAEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFW 489

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +L K +P   + V+  +V V+  LA LL+ F+P  +N++ 
Sbjct: 490 KLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVL 529


>gi|4091008|gb|AAC99620.1| methionyl-tRNA synthetase [Oryza sativa]
          Length = 804

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 234/520 (45%), Gaps = 57/520 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +V++  GTDE+G      A
Sbjct: 18  RRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETKA 77

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + + 
Sbjct: 78  MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 137

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164
                Y    + +  D  V          Y+ A G Q  N     NP + ++ +      
Sbjct: 138 TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 197

Query: 165 ---------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     F  L    DKL++Y  E+    +          +++K GLK   ++R   
Sbjct: 198 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 256

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG+ +P +     + YVW DA   Y++ T     PD  K  +W  P ++ +   +GKD 
Sbjct: 257 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDN 313

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEV 320
           + FH + +P+ LL       + K +    ++ ++  K SKS      GN      +  EV
Sbjct: 314 VPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV 373

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376
                RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +
Sbjct: 374 ----WRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSI 429

Query: 377 IP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P  P A +    +++    ++ +++  E M+   + + L   + + S+ + Y    + W
Sbjct: 430 VPDAPNAESHPLTKALAEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFW 489

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +L K +P   + V+  +V V+  LA LL+ F+P  +N++ 
Sbjct: 490 KLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVL 529


>gi|18313703|ref|NP_560370.1| methionyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|25009379|sp|Q8ZU56|SYM_PYRAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18161256|gb|AAL64552.1| methionyl-tRNA synthetase alpha subunit [Pyrobaculum aerophilum
           str. IM2]
          Length = 570

 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 229/511 (44%), Gaps = 44/511 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ RL G +V+F +G+D HG  +   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLKGHEVVFVSGSDVHGTPVEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +      ++    +IS+D +  T  + H    +  + KI + G I+    
Sbjct: 63  LGVDPAEYSMKMHAIVAELFKKWNISFDLYTHTHSETHIKFVQDFYLKIYENGYIFTKED 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQ--------------W 159
              Y  RD+ Y  D  +        Y+ A G Q  N     +P Q              W
Sbjct: 123 EVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLIEPKCAVCGSKPEW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + ++  L   +D++  Y E +P   LP   +   ++ +K GL+  +++R    WGI 
Sbjct: 183 RITKHWYLDLRRLEDRIRKYVEENPH--LPPNAKEMSLAMLKEGLRPRAVTRDN-KWGIP 239

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFW--PAD--LHVIGKDILRF 270
              P      +YVW +A+  Y++         G +    +FW  P    +  +GKD + F
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEYFKKIGREEEWKRFWLDPETKVVFFVGKDNVPF 299

Query: 271 HAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIEEVGVDALR 326
           H I  PA LL+      +P    S  ++L++G+K SKS   G  ID  E ++ +  D  R
Sbjct: 300 HVIILPALLLANGGGYVMPTTTASTEYLLYEGDKFSKSRRWGVWID--EALQLLPADYWR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + L+      +D  +      + +N  L + +GN  +R +S I     G +P  G  +  
Sbjct: 358 FVLIYIRPENRDTNFSWSTALEIINKVLNDDVGNYANRVLSFIKNRMGGAVPPRGKPSRD 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           DE  +    R+ ++   + +   +  A+  V+ +  E ++Y +A+ PW+L K + D A+ 
Sbjct: 418 DEEFIEKVKRLFEKAEAHYEAIELKDAVHTVVEIAREGNKYLNARAPWDLVKKDVDAANA 477

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+Y     ++ LA+ L   +P+ A +++ ++
Sbjct: 478 VMYHAYWSLKFLAVGLAPAIPESAEQLWKMM 508


>gi|149179757|ref|ZP_01858262.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851949|gb|EDL66094.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 549

 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 223/509 (43%), Gaps = 57/509 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR+HRL G DVL+ +G+D +G  I   A   G
Sbjct: 12  VFIGGAWPYANGSLHVGHLAALLPGDILARYHRLKGEDVLYVSGSDCNGTPIEIRAHQEG 71

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  +   D+  + F D    L  SYD + RT    HH   + ++  + D G +Y+     
Sbjct: 72  VKVRDIADRYHQEFLDCFQKLGFSYDQYGRTDSANHHQEVQKIFLTLKDNGFLYEKTTEE 131

Query: 127 WYSLRDEAYYND----------DEVYKG--ADG------------QYYNAQHNPVQWMEE 162
            + L  + +  D          +E  +G   DG            ++     NP   ++E
Sbjct: 132 TFCLHCDRFLPDRFVEGTCPNCNEKARGDQCDGCGTILDPRELIDRHCKLCGNPPS-LKE 190

Query: 163 EGYFFRLSA--------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +F+   +        Y +K    +  + E    + RR     ++  GL D + +R   
Sbjct: 191 TAHFYLALSLLEEELKDYLNKNKGKWRENAE---ALTRR-----YINEGLHDRAATRDIG 242

Query: 215 DWGIKIP----DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADL---HVIGKD 266
             G+ +P    +D +  +YVWI+A++ YLT +  + +  +    KFW  +    +V GKD
Sbjct: 243 T-GVDVPVEGYNDKK--IYVWIEAVSGYLTGSIEWGEKHERDWRKFWDKEAVSYYVHGKD 299

Query: 267 ILRFHAIYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            + FH I WPA L   N   LP  + S  ++  + +KIS S    +   +V+++   D L
Sbjct: 300 NIPFHTIIWPAILKGLNSDGLPDWIVSSEYVTLEKKKISTSKDWAVWLPDVLKDYHPDTL 359

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+        +D  +       + N++L   +GN + R+V    K++            
Sbjct: 360 RYYFSANYPDKRDADFSWREFILKHNSELVGSLGNFIQRTVKFYRKEFG----ESAVLET 415

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D  ++     V ++  E ++     +A  +   +V   ++YFD ++PW + K + + A 
Sbjct: 416 IDPIVVRELYTVFRQTGELIEEGECRKAAKRAFEIVRWGNKYFDDKQPWRVIKEDRNEAR 475

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +L   + +   L+ LL  F+P  A +I 
Sbjct: 476 FILESCLYISINLSQLLSPFIPFSAEEIL 504


>gi|257053975|ref|YP_003131808.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692738|gb|ACV13075.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 697

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/507 (23%), Positives = 210/507 (41%), Gaps = 53/507 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  DVL R     G    F +G+D HG  IA  A    + 
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDVLTRSLEKLGQQTAFVSGSDMHGTPIAVQAIEDDID 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  +    + +     D+ +D++  T ++ + +    + + +   G + +      +
Sbjct: 74  PEAFALEYHEQYEETFPEFDVDFDNYGHTHQETNRELTHEIVEALEAAGYVDEQEIKVAW 133

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQH---------------NPVQWMEEE 163
              D+    D           E  +G +      +H               NP ++ E  
Sbjct: 134 DPEDDQPLPDRYVVGTCPYCGETARGDECDEGCGRHLEPGEIEDPVSKISGNPAEYRERT 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221
             FF +S   D L  + +           +N+   +++ GL+D  ++R   DWG   P  
Sbjct: 194 HKFFEVSKLADYLSGFLDR---LEGTANAKNQPRQWIEEGLQDWCITRD-MDWGFDYPEV 249

Query: 222 ----DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKDIL 268
               DD     ++YVW+DA   Y+ +T    +  G +A  W          +HVIG+DI+
Sbjct: 250 DDTGDDTAEDLVLYVWVDAPIEYIASTKQYTDRVGPEAYDWAETWKESGEIIHVIGRDII 309

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           + H I+WPA L  A    P+ V + GF+   G+  S S    I   E ++E    D LRY
Sbjct: 310 QHHTIFWPAMLHVAEFNEPRAVVASGFMSLDGDAFSTSRNRAIWAREYLDEGFHPDLLRY 369

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L        D  +  D  ++RVN +L   +GN   RS+    ++Y G   TP A    D
Sbjct: 370 YLTTVGGFQDDIDFSWDRFRERVNGELVGTVGNFAYRSLLFADRNYGG---TPDADLSPD 426

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +       +++    + +  I +A    + L S  + Y    +PW L   + D A+ +
Sbjct: 427 --VEDRIEDAIEDFEAGVNDYSIRKATQAAVELASFGNEYIQRHEPWNL---DDDEAAPI 481

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   V++ + +A+LLQ   P  + +++
Sbjct: 482 IRDCVQIAKAVAVLLQPTTPDTSRRLW 508


>gi|326528397|dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 240/531 (45%), Gaps = 54/531 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 19  RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 78

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+     + C+ ++ K+ +   + + 
Sbjct: 79  LEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTEN 138

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164
                Y    E +  D  V          Y+ A G Q  N     NP + ++ +      
Sbjct: 139 TMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 198

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212
                     F  L    DKL++Y  +    +  +  +N + +   ++K GLK   ++R 
Sbjct: 199 APRIRDTDHLFLELPLLSDKLVNYINNTS--VAGMWSQNAIQATNAWLKEGLKQRCITRD 256

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265
              WG+ +P +     + YVW DA   Y++ T     PD  K  +W  P ++ +   +GK
Sbjct: 257 -LKWGVPVPHEKYKDKVFYVWFDAPIEYISITASY-TPDWEK--WWKDPDNVELFQFMGK 312

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH + +P+ LL    N  + K +    ++ ++  K SKS G  V      I  +  
Sbjct: 313 DNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKITNIPS 372

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378
           +  RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +IP
Sbjct: 373 EVWRYYLLMNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFVAKPAGGGYDSIIP 432

Query: 379 -TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             P A +    + L+   ++ ++   E M+   + + L   +++ S+ + Y    + W L
Sbjct: 433 DAPNAESHPLTNTLAEKTNKWVEHYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRL 492

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486
            K +P   + V+  +V V+  LA LL+ F+P  + ++   L ++ DE+  F
Sbjct: 493 YKEDPATCAIVMKTSVGVVYLLACLLEPFMPSFSREVLHQLNMSPDEDLSF 543


>gi|326506100|dbj|BAJ91289.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 240/531 (45%), Gaps = 54/531 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 19  RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 78

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+     + C+ ++ K+ +   + + 
Sbjct: 79  LEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTEN 138

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWMEEEG----- 164
                Y    E +  D  V          Y+ A G Q  N     NP + ++ +      
Sbjct: 139 TMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 198

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212
                     F  L    DKL++Y  +    +  +  +N + +   ++K GLK   ++R 
Sbjct: 199 APRIRDTDHLFLELPLLSDKLVNYINNTS--VAGMWSQNAIQATNAWLKEGLKQRCITRD 256

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265
              WG+ +P +     + YVW DA   Y++ T     PD  K  +W  P ++ +   +GK
Sbjct: 257 -LKWGVPVPHEKYKDKVFYVWFDAPIGYISITASY-TPDWEK--WWKDPDNVELFQFMGK 312

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH + +P+ LL    N  + K +    ++ ++  K SKS G  V      I  +  
Sbjct: 313 DNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKITNIPS 372

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378
           +  RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +IP
Sbjct: 373 EVWRYYLLMNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFVAKPAGGGYDSIIP 432

Query: 379 -TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             P A +    + L+   ++ ++   E M+   + + L   +++ S+ + Y    + W L
Sbjct: 433 DAPNAESHPLTNTLAEKTNKWVEHYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRL 492

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486
            K +P   + V+  +V V+  LA LL+ F+P  + ++   L ++ DE+  F
Sbjct: 493 YKEDPATCAIVMKTSVGVVYLLACLLEPFMPSFSREVLHQLNMSPDEDLSF 543


>gi|126462842|ref|YP_001043956.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|187647760|sp|A3PLG8|SYM_RHOS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|126104506|gb|ABN77184.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 572

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +     +++A    +S+D F R++  R+H   +     +++ G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNP---------------VQ 158
             ++S+ D  +  D  +            +G   +    Q +P               ++
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTDADWERWWRTDRGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+  E +  +++   + L      M+   + +A +++ +L    + Y  +  PW + 
Sbjct: 422 PAGGSPGEREHQLVAELQQRLAAYEACMEAMEVRKAASELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+P++A  ++ + + +IR  A++ + F+P  A  +   L   D
Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMTSLGCED 525


>gi|325916608|ref|ZP_08178871.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537162|gb|EGD08895.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 696

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 207/498 (41%), Gaps = 46/498 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    + +     + K+   G I +   + +
Sbjct: 67  PEAFIANIQASHERDFA-AFGVTFDHYDSTNSPVNRELTEAFYSKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  +       G+  QY        A + P +  E               
Sbjct: 126 YDPAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPELRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +FF +  +   L  +     +  LP ++ + +     + GL+   +SR    +G +IP
Sbjct: 186 EHFFFEVGHFDGFLREWLAG--DVALPGVKAKLKEWLDTEGGLRAWDISRDAPYFGFQIP 243

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYW 275
             P    YVW+DA   YL +   L    G        A       H IGKDI+ FH ++W
Sbjct: 244 GRPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDTHLVAGTQTELHHFIGKDIVNFHGLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREI 333
           PA L       P ++  +G++   G K+SKS G  +       +VG+  +ALRY+   + 
Sbjct: 304 PAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFV-MARTFLDVGLEPEALRYYFAAKS 362

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           + G D    +      RVNADL     NL SR    I K ++G +    A    D++   
Sbjct: 363 SGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFEGKL----ADALPDQAQYD 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
                L  IR+  +      A+ Q ++L  E ++Y D  KPW + K +   A   +V   
Sbjct: 419 RFVAALAPIRDAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCTQ 478

Query: 451 TVEVIRQLAILLQAFVPK 468
            + + R L   L+  +P+
Sbjct: 479 GLNLFRILVAGLKPILPR 496


>gi|307718042|ref|YP_003873574.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531767|gb|ADN01301.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 719

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 223/516 (43%), Gaps = 56/516 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I++A+ Y N  PH+G+  +++ ADV AR+ R  G + L+  GTDE+G      A 
Sbjct: 2   KKKRLITSALPYVNNVPHLGNLIQVLSADVFARYCRSAGYETLYVCGTDEYGTATETRAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D+      ++ +  +I +D + RT+   H    + ++ K+   G I +  
Sbjct: 62  EEGISPKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIKERT 121

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEG-------- 164
               YS +   +  D  V        Y+ A G   ++     +P + +E           
Sbjct: 122 IQQLYSEKSGMFLADRYVRGTCPHCGYEDARGDQCEHCGKLLDPTELIEPRSAIDGSTPV 181

Query: 165 ------YFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  +  L A   KL ++ E       +     R  E  S+++ GL++  ++R    
Sbjct: 182 LRETKHLYLDLPALLPKLKAWMEKASVEGRWATNAIRMTE--SWIRDGLRERCITRD-LK 238

Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264
           WG+ +P  P Y   + YVW DA   Y++ T         +  NPDG +          IG
Sbjct: 239 WGVPVP-KPGYENKVFYVWFDAPIGYISITATYTDRWEEWWKNPDGVEL------YQFIG 291

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH + +P+ LL       L K + S  ++ ++  K SKS G  V         + 
Sbjct: 292 KDNIPFHTVIFPSTLLGTGEGWTLLKTMSSTEYLNYESGKFSKSRGVGVFGNDAKDTGIP 351

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L        D  +     +++VN +L     NLV+R++S I + Y G IP   
Sbjct: 352 ADVWRFYLFYNRPETSDYTFTWKDFQEKVNGELIGNFANLVNRTLSFIHRFYQGRIPE-- 409

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                D ++      +  +I E ++   +  A   + +L    ++ F A +PW+ +   P
Sbjct: 410 --APVDTALWGRVRELEGQITEYLERAQLRDAFRTMFALSDLGNKAFQAGEPWKTRTERP 467

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + A  +L     ++R LAIL+  ++P  + +I   L
Sbjct: 468 EEAEKLLRNLAYLVRDLAILVAPYLPATSRRILGFL 503


>gi|315931151|gb|EFV10124.1| Methionine-tRNA ligase [Campylobacter jejuni subsp. jejuni 327]
          Length = 187

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 4/189 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    D    +   N    ++EE YFF+LS YQDK+L +YE   + I
Sbjct: 123 YCISCESFFTQSQLIN--DCSCPDCGKNTT-ILKEESYFFKLSKYQDKILQWYEE-KDPI 178

Query: 188 LPIERRNEV 196
           LP  ++  +
Sbjct: 179 LPKNKKTNL 187


>gi|126725226|ref|ZP_01741069.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706390|gb|EBA05480.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 572

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/531 (22%), Positives = 224/531 (42%), Gaps = 61/531 (11%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ ARF R  G +V+F   TDEHG     AA  
Sbjct: 2   RVLITSAIPYINGIKHLGNLVGSQLPADLYARFMRARGHEVMFLCATDEHGTPAELAATK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     F  +       +A    +S+D F R++  ++ +  +    K+++   I +   
Sbjct: 62  AGKPVADFCAEMHEVQATIAKGFGMSFDHFGRSSSPQNRELTQYFAGKLAENDLIAEVTG 121

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYF------- 166
              YS  D  Y  D  +        Y GA G   +    Q +P   +E            
Sbjct: 122 KQVYSNADGRYLPDRYIEGTCPNCGYDGARGDQCENCTKQLDPTDLLEPRSAISGSTDLE 181

Query: 167 --------FRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVK--SGLKDLSLSRKT 213
                    R S   D+L ++ +S    P     I R+     +++   GL+D  ++R  
Sbjct: 182 VRDTKHLHLRQSTMVDQLEAWIDSKKDWPTLTTSIARK-----WLRDGDGLQDRGITRD- 235

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259
            DWG+ +       P     + YVW DA   Y+         +G       ++W  D   
Sbjct: 236 LDWGVPVKNGTEDWPGMEGKVFYVWFDAPIEYIACAAEWAEANGKSEADWQRWWRTDKGA 295

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +P  +L +N P  L   + S  F+ + G + S S G  I 
Sbjct: 296 DDVKYVQFMGKDNVPFHTLSFPVTILGSNEPWKLVDYIKSFNFLNYDGGQFSTSKGRGIF 355

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  +  VN DLAN +GN +SR        
Sbjct: 356 MDQALEILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLANVLGNFISRITKFCRSK 415

Query: 373 YDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           +   +P     A  +    + +  + +++E   +M+   + ++   + ++    + Y   
Sbjct: 416 FSEAVPAAPLDAIAQERAGLWASLAPLIKEYETHMEAMEVRKSANTLRAIWVVGNEYLQN 475

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             PW + KT+P+ A+ +++V++ +IR  A++   F+P  A ++ D +   D
Sbjct: 476 TAPWTVNKTDPEAAAAIVHVSLNLIRLFAVVSSPFIPHAAQQMMDDMHTDD 526


>gi|77463998|ref|YP_353502.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123757747|sp|Q3J0T3|SYM_RHOS4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77388416|gb|ABA79601.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 572

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/524 (21%), Positives = 228/524 (43%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +     +++A    +S+D F R++  R+H   +     +++ G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNP---------------VQ 158
             ++S+ D  +  D  +            +G   +    Q +P               ++
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+  E +  +++   + L      M+   + +A +++ +L    + Y  +  PW + 
Sbjct: 422 PAGGSPGEREHQLVAELQQRLAAYEACMEAMEVRKAASELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+P++A  ++ + + +IR  A++ + F+P  A  +   L   D
Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCED 525


>gi|292654972|ref|YP_003534869.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371457|gb|ADE03684.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 740

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/548 (22%), Positives = 224/548 (40%), Gaps = 88/548 (16%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D+ +R  R  G    F +G+D HG  +A  A+  GVT
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDIYSRSLRTLGQQTAFVSGSDMHGTPVAVNAEKEGVT 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  ++   +       +I +D++  T ++ + +  + + + +  +G +Y+      Y
Sbjct: 74  PEEFALRHHEKYEATFPRFNIEFDNYGHTHDETNTELTQEIVRTLEAEGYVYEKEIPVAY 133

Query: 129 S------LRDE----------AYYNDDEVYKGADGQYYNAQH----------NPVQWMEE 162
                  L D           A+   DE  +G  G++               NP ++ E 
Sbjct: 134 DPDADQWLPDRFVEGACPYCGAHARGDECDEGC-GRHLEPGEIEDPTSTLTGNPAEYRER 192

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSLSRKTFDWGI 218
           E  FF +S  QD L        EFI  +E     RN+   +++  L+D  ++R   DWGI
Sbjct: 193 EHKFFAVSDLQDYLQ-------EFIDRLEGTSNARNQPREWIEGELQDWCITRD-MDWGI 244

Query: 219 KIP------DDPQ-------------------------YIMYVWIDALTNYLTTTGYLDN 247
             P      +D +                          ++YVW+DA   Y+++T     
Sbjct: 245 DYPGVSESAEDSEADQTESGRDEGDESDGSSSPSGTSDLVLYVWVDAPVEYVSSTKQYTE 304

Query: 248 PDGSKAKFWPAD-------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+    W          +H+IG+DI++ H ++WPA L  A    P+ V + GFI   G
Sbjct: 305 RVGADTFDWEVAWKDAGDIVHIIGRDIIQHHTVFWPAMLRGAGYVEPRAVMASGFITLNG 364

Query: 301 EKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           +  S S    +   E ++E    D LRY+L       +D  +     K RVN++L   +G
Sbjct: 365 KGFSTSRNRAVWADEYLDEGFHPDLLRYYLATNGGFQQDVDFSWSKFKDRVNSELVGTVG 424

Query: 360 NLVSRSVSMILKDYDGM----------IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           N + RS+    ++++G             T     E  E + +     + E    + +  
Sbjct: 425 NFLYRSMLFAYRNFEGTPDVSELHSEASETGSRAAEVSEEVEARIEEAIDEFEAGINDYS 484

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + ++    + L    + Y    +PW+L   +P+ A+ V+   V++ + +A+L     P  
Sbjct: 485 VRKSGNAAVRLAQFGNEYIQRNEPWKLTDEDPEAAAQVIRDCVQIAKAIAVLFFPVAPGK 544

Query: 470 ANKIFDIL 477
              +++ L
Sbjct: 545 MQALWEQL 552


>gi|226330823|ref|ZP_03806341.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198]
 gi|225201618|gb|EEG83972.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198]
          Length = 541

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 17/322 (5%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E YFF L A+ + L  +  S     L  +  N++  +  SGL+   ++R    +G +I
Sbjct: 53  ETEHYFFDLPAFSNMLQEWIRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPYFGFEI 109

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW----PADL-HVIGKDILRFHAI 273
           PD P    YVW+DA   Y+++   L    G  S  +FW     ADL H IGKDI+ FH++
Sbjct: 110 PDAPGKYFYVWLDAPIGYMSSFLNLCEKRGDLSFDEFWNKDSKADLYHFIGKDIVYFHSL 169

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++    D LRY+   ++
Sbjct: 170 FWPAMLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAKL 229

Query: 334 ACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +   D    + +   +RVN+D+ N + NL SR+   I K +DG +    A +  D  +  
Sbjct: 230 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----ADSLDDAKLYQ 285

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYV 450
               + + I ++ +N+   +A+ ++++L  E +RY D + PW + K     A    +  +
Sbjct: 286 HFVDMKETIAQSFENREFGKAVREIMALADEANRYIDEKAPWVVAKQEGQDAQLQAICTM 345

Query: 451 TVEVIRQLAILLQAFVPKLANK 472
            + + R L   L+  +P L  +
Sbjct: 346 GINLFRVLMTYLKPVLPSLTER 367


>gi|315274506|ref|ZP_07869420.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615865|gb|EFR89079.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 153

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 99/150 (66%), Gaps = 3/150 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++  +GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLVQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQ 148
           G Y GWYS+ DE Y+ +   +EVYK  +G+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGK 153


>gi|119384777|ref|YP_915833.1| methionyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|187647740|sp|A1B3P3|SYM_PARDP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119374544|gb|ABL70137.1| methionyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 572

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/526 (22%), Positives = 228/526 (43%), Gaps = 55/526 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R    +V+F   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRDNEVMFICATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
              V+  +      ++A    +S+D F R++ +R+H   +    K+ + G I +      
Sbjct: 66  PIAVYCAEMHEVQAEIARNFGLSFDHFGRSSSERNHVLTQHFAGKLDENGYIAEVEERQV 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------------ 164
           YS+ D  +  D  +            +G   +    Q +P   +E               
Sbjct: 126 YSIDDGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTNLEVRA 185

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219
               + R  + +D++ ++ +S  ++  PI   +    ++  G  L+D  ++R   DWGI 
Sbjct: 186 TKHLYLRQRSLKDRIAAWIDSKTDW--PILTTSIARKWLNDGDGLQDRGITRD-LDWGIP 242

Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPAD--------L 260
           +       P     + YVW DA   Y+  T         PD +  ++W  D         
Sbjct: 243 VKKGDKPWPGMEGKVFYVWFDAPIEYIAATAEGADKRGEPDSAWRRWWRLDEGAEDVTYT 302

Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + + 
Sbjct: 303 QFMGKDNVPFHTLSFPATIIGSGEPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMDQALS 362

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+       D  +  D  ++ VN DLA+ +GN VSR        +   IP
Sbjct: 363 ILPADYWRWWLLSHAPESGDSEFTWDNFQQSVNKDLADVLGNFVSRITKFCRSKFGETIP 422

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G++   +E+++   +  ++     M +  + ++ A++ ++    + Y  +  PW   K
Sbjct: 423 QGGSYGPEEEALIQALTTRIRAYEGFMDHVEVRKSAAELRAIWVLGNEYLQSAAPWSTFK 482

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           T+PD+A+  + + + +IR  A+L   F+P  A+ +   +    ENR
Sbjct: 483 TDPDKAAMQVRLGLNLIRLYAVLSAPFIPFAADAMLAAM--QTENR 526


>gi|15639785|ref|NP_219235.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026023|ref|YP_001933795.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094408|sp|O83776|SYM_TREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3323103|gb|AAC65761.1| methionyl-tRNA synthetase (metG) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018598|gb|ACD71216.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060156|gb|ADD72891.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 811

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 220/515 (42%), Gaps = 59/515 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+ A+ Y N  PH+G+  + + ADV ARF R+ G    F  GTDE+G      A   G++
Sbjct: 6   ITAALPYVNNVPHLGNLIQGLSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQGLS 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                       RD+    D+S+D F RTT   H +  + L++ +  +G I +   +  Y
Sbjct: 66  PAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFISEHESAQAY 125

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-- 186
            L   A +  D   +G      NA+    Q  E  G         +       + PEF  
Sbjct: 126 CLHC-ARFLADRYLRGTCPHCRNAEARADQ-CEHCGVLLEPETLLNARCVSCGTAPEFRP 183

Query: 187 -------ILPIER--------------RNEVI---SFVKSGLKDLSLSRKTFDWGIKIPD 222
                  +  +E+              +N V     ++++GL++ +++R    WG+ +P 
Sbjct: 184 TRHLYLNLPALEKAYRSWFCTTNHLWTKNAVRMTEGWLRTGLQERAITRD-LRWGVPVPK 242

Query: 223 D--PQYIMYVWIDALTNYLTTT------------GYLDNPDGSKAKFWPAD------LHV 262
               Q + YVW DA   Y++ T            G  D+    K + W  D      +  
Sbjct: 243 AGFEQKVFYVWFDAPVGYISITKCGTEAASSQEGGGTDDGVKEKWQSWWLDQQDVELVQF 302

Query: 263 IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE- 319
           +GKD + FH +++P  L+ +     +  ++ +  ++ ++G K SKSLG  +   +  E  
Sbjct: 303 VGKDNIPFHTLFFPCMLIGSGQRWTMLTRLSATEYLNYEGGKFSKSLGVGVFGSDAKESG 362

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +     ++RVN++L   + NLV+R+++ + + Y G++P 
Sbjct: 363 IPSDLWRFYLLYHRPEKSDAHFTWHEFQERVNSELIGNLCNLVNRTLTFVARTYGGVVPA 422

Query: 380 PGAFTESDESILSVCSRVLQEIREN-------MQNQLIHRALAQVISLVSEVDRYFDAQK 432
                 +   ++     + + +R         M+   +  A  +V +L +  ++      
Sbjct: 423 QDGARSTRAQVMEETLALREAVRNTAKRMTDLMEQVQLREAFREVFALSARANKALQDGA 482

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           PW+ +  + +RA  ++     VIR + IL   F+P
Sbjct: 483 PWKTRAQDRERADALMRELCYVIRDVLILAHPFLP 517


>gi|325971031|ref|YP_004247222.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026269|gb|ADY13028.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 741

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 235/522 (45%), Gaps = 51/522 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +K  +++A+ Y N  PH+G+  +++ ADV ARF R  G + L+  GTDE+G     
Sbjct: 1   MSPMKKRLVTSALPYVNNIPHLGNLTQVLSADVFARFCRSKGYETLYICGTDEYGTATET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GV+ +   D+     RD+    +I++D F RT+        + ++ K+   G I 
Sbjct: 61  RALKEGVSPRELCDRYHAIHRDIYAWFNIAFDYFGRTSTPEQTKIVQDIFTKVDAAGYIS 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRL 169
           +      Y    + +  D  V         +GA G   ++     +P++ +         
Sbjct: 121 EHELEQLYCPSCQRFLADRFVEGTCPHCHSEGARGDQCDSCQTLLDPIELINPRCGVCGT 180

Query: 170 SAYQDKLLSYYESHPEFILPIERRNE---------------VISFVKSGLKDLSLSRKTF 214
                K    Y   P+ +  +E   E                 S+++ GLK+  ++R   
Sbjct: 181 RPVPKKTKHLYIDLPKALPLLEGWMEKASKEGFWANNAIQVTKSWIRDGLKERCITRD-L 239

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266
            WGI +P  P Y   + YVW DA   Y++ +    N      K+W  P +  +   IGKD
Sbjct: 240 KWGIPVPK-PGYEDKVFYVWFDAPIGYVSISA---NATKDWKKWWGDPENTELFQFIGKD 295

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322
            + FH + +P+  L++     +   + S  ++ ++G K SKSLG  I   +V ++ G+  
Sbjct: 296 NIPFHTVIFPSCQLASGETWTMLHHMSSTEYLNYEGGKFSKSLGIGIFGNDV-QDTGIPA 354

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R+++        D  +     +++VN +L   + NLV+R+++ I + Y    P    
Sbjct: 355 DVWRFYMFYNRPEKSDVTFTWADFQEKVNGELIGNLSNLVNRTLTFIQRFY----PDASL 410

Query: 383 FTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              S DE +         EI   ++       L Q+++L S  ++ F   +PW+LK ++P
Sbjct: 411 LKASLDEELWKQVIAKEAEIDALLERAEEREGLRQILALSSIGNKAFQDGEPWKLKNSDP 470

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +A ++L   + +IR L I+++ ++P  + +I  + F+  EN
Sbjct: 471 QKAMSLLKTLIYLIRDLGIMVEPYMPTTSTRI--LAFLGSEN 510


>gi|294503497|ref|YP_003567559.1| methionyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|262361540|gb|ACY58261.1| methionyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365721|gb|ACY62278.1| methionyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294353956|gb|ADE64297.1| methionyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 616

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 196/447 (43%), Gaps = 44/447 (9%)

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I  
Sbjct: 4   AQQMGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKN 63

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM--------- 160
              S  Y   ++  +  D   KG      A  QY        A ++P + +         
Sbjct: 64  RTISQLYD-PEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGA 122

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    
Sbjct: 123 TPVMRESEHFFFDLPAFSDMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDITRDAPY 179

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL-----HVIGKDIL 268
           +G ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+
Sbjct: 180 FGFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIV 239

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+
Sbjct: 240 YFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYY 299

Query: 329 LVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVNAD+ N + NL SR+   I K + G +    A   +D
Sbjct: 300 YAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLAD 355

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
             +    +     I +   N+   +A+ ++++L    +RY D Q PW + K     A   
Sbjct: 356 PVLYKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLH 415

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  + + + R L   L+  +P L  +
Sbjct: 416 AICSMGINLFRVLMTYLKPVLPSLTER 442


>gi|254477821|ref|ZP_05091207.1| methionyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214032064|gb|EEB72899.1| methionyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 578

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 228/531 (42%), Gaps = 49/531 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG    
Sbjct: 3   MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGNEVMFLCATDEHGTPAE 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +       +A    +S+D F R++  ++H   +    K+++ G I
Sbjct: 63  LAAAKAGKPVAEYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG---- 164
            +      YS  D+ +  D  V            +G   +    Q +P   +E       
Sbjct: 123 REVEDRQVYSHADKRFLPDRYVEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISG 182

Query: 165 -----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                       +   S  +D+L ++ +S  ++ +      +       GL+D  ++R  
Sbjct: 183 STDLEVRATKHLYLCQSQLKDELDAWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD- 241

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259
            DWGI +       P     + YVW DA   Y+   G     +G       ++W  D   
Sbjct: 242 LDWGIPVKKGDQDWPGMEGKVFYVWFDAPIEYIAAAGEWAEANGKSDAEWERWWRTDKGA 301

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P  +   + S  ++ + G + S S G  + 
Sbjct: 302 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 361

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 362 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 421

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           Y   +P  G++ E++++++   +  ++   ++M    + ++  ++ ++    + Y  +  
Sbjct: 422 YGEEVPAGGSYGEAEQTLIKELTTRIRAYEDHMAAMEVRKSAQELRAIWVAGNEYLQSVA 481

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           PW   KT+P++A+  + + + +IR  A+L   F+P   + +   +   D++
Sbjct: 482 PWSTFKTDPEQAAAQVRLGLNLIRLYAVLSSPFIPTAKDTLLAAMQTEDDS 532


>gi|242036495|ref|XP_002465642.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor]
 gi|241919496|gb|EER92640.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor]
          Length = 799

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 228/536 (42%), Gaps = 63/536 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 14  RRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+      ++    +I +D F RT+     + C  ++ K+ +   + + 
Sbjct: 74  MEEKCTPKEICDKYHAIHNEVYKWFNIKFDKFGRTSSPEQTEVCHAIFHKLMENNWLTEN 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEG------ 164
                Y    + +  D  V      +  NA              NP + ++ +       
Sbjct: 134 TMQQLYCDTCQKFLADRLVEGTCPNKACNASARGDQCETCSTLLNPTELIDPKCKVCKNT 193

Query: 165 --------YFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    F  L   +DKL++Y  E+               +++K GLK   ++R    
Sbjct: 194 PRIRDTDHLFLELPLLRDKLVNYINETSVAGSWSQNAIQATNAWLKEGLKPRCITRD-LK 252

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIGK 265
           WG+ +P +     + YVW DA   Y++ T         +  NPD  +          +GK
Sbjct: 253 WGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPEWEKWWKNPDNVEL------FQFMGK 306

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIE 318
           D + FH I +P+ LL       + K +    ++ ++  K SKS      GN      +  
Sbjct: 307 DNVPFHTIMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPP 366

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYD 374
           EV     RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD
Sbjct: 367 EV----WRYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYD 422

Query: 375 GMIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            ++P  P A T    +++    S+ +++  + M+   + + L   + + S+ + Y    +
Sbjct: 423 SVVPDAPNASTHPLTKTLAEKTSKWVEQYLDAMEKVKLKQGLKSAMGISSDGNAYLQESQ 482

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQ 487
            W+L K +P   + V+  +V ++  LA LL+ F+P  ++++   L    +EN  F 
Sbjct: 483 FWKLYKEDPASCAIVMKTSVGLVYLLACLLEPFMPSFSDEVLRQLNLCPEENLSFS 538


>gi|89069900|ref|ZP_01157234.1| methionyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044576|gb|EAR50695.1| methionyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 572

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 226/524 (43%), Gaps = 57/524 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLFARYQRARGHEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +  +   D+A+   +S+D F R++  ++H   +     ++++G I +   +  
Sbjct: 66  PVAEYCAEMWQVQADLAEGFGLSFDHFGRSSSPQNHALTQHFAGVLAEQGLIEEVSETQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE-------------- 162
           YS  D  +  D            E  +G        Q +PV  ++               
Sbjct: 126 YSPADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLIDAYSTISGSRELEMRA 185

Query: 163 -EGYFFRLSAYQDKLLSYYESH---PEFILPIERR--NEVISFVKSGLKDLSLSRKTFDW 216
            +  + R S  +D+L ++ ++    P     I R+  N+       GL+D  ++R   DW
Sbjct: 186 TKHLYLRQSVLKDELAAWIDTKTDWPVLTTSIARKWLND-----GDGLQDRGITRD-LDW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD-------- 259
           G+ +       P     + YVW DA   Y+     +++   G   A++W  D        
Sbjct: 240 GVPVKRGSEDWPGMEGKVFYVWFDAPIEYIACAQEWVEAGKGDDWARWWRTDRGADDVRY 299

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 300 TQFMGKDNVPFHTLSFPATILGSREPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +
Sbjct: 360 EILPADYWRWWLLSHAPESADAEFTWENFQASVNKDLADVLGNFVSRVTKFCNAKFGPQV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA    + +++      ++    +M    + +A A++ ++    + Y     PW + 
Sbjct: 420 PEAGAHGPDEAALIEELEGRVRAYERHMDAIEVRKAAAELRAIWVTGNEYLQKAAPWTVI 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KT+  RA   + + + +IR  AIL   FVP  + ++ + L V+D
Sbjct: 480 KTDEARAKAQIALGLNLIRLYAILSAPFVPNASARMLEALGVSD 523


>gi|257389032|ref|YP_003178805.1| methionyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171339|gb|ACV49098.1| methionyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 708

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/527 (22%), Positives = 216/527 (40%), Gaps = 68/527 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    +  DV AR  R  G    F  G+D HG  I   A   GV 
Sbjct: 14  VTVGLPYANGDLHVGHLRGYVNGDVYARALRRVGQQTAFVCGSDMHGTPIVVNAGEEGVD 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + +  +    + +     ++ +D++  T +  + +  +   +   ++  +Y+      Y
Sbjct: 74  PEAYALEYHETYAETFPQFNVEFDNYGHTHDDTNQELTQEFVRSWVEQDHVYEKEIQVGY 133

Query: 129 SLRDEAYYND----------------DEVYKGADGQYYNAQ---------HNPVQWMEEE 163
               + +  D                DE  +G        +          NP ++   E
Sbjct: 134 DPEADQWLPDRLVEGTCPYCGERARGDECDEGCQRHLEPGEIEDPVSTRTGNPAEYRTRE 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F RL+ +Q+ L  + +           +N+   +V+  L+DL ++R   DWG+  P D
Sbjct: 194 HKFLRLNDFQEYLQGFLDR---LDGTDNAQNQPREWVEGDLQDLCITRD-IDWGVDYPTD 249

Query: 224 PQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----------------- 259
                     ++YVW+DA   Y+ +T       G     W +                  
Sbjct: 250 ADDEETEEDLVLYVWVDAPIEYVASTKQYTERVGEDTYDWESVWKLGGEERHGTDWDDDW 309

Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
                  +HVIG+DI++ HA++WPA L  A    P+ + + GF+   G  +S S    + 
Sbjct: 310 TDEAGEIVHVIGRDIIQHHAVFWPAMLRGAGYNEPRAILATGFVNIDGNSLSTSRNRAVW 369

Query: 313 PIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
             E ++     D  RY++V       D  +  D   +RVN +L   +GN + RS+    +
Sbjct: 370 ADEYLDAGFHPDLFRYYIVSGSGIETDVDFSWDRFAERVNGELVGNVGNFLYRSLLFAKR 429

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLVSEVDRYFDA 430
           +Y G   TP   TE  + +       ++   + + +  + RALA V + L    + Y   
Sbjct: 430 NYGG---TPD--TEISDDVRERIEDAIETFEDAVDDYEL-RALADVGVELADFGNEYIQR 483

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +PW L   +P+RA  V+   V++ + +A+LLQ  +P+ A +I+  L
Sbjct: 484 NEPWNLVDDDPERAQQVIRDCVQLSKAVAVLLQPVLPEKAERIWGQL 530


>gi|315499719|ref|YP_004088522.1| methionyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417731|gb|ADU14371.1| methionyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 572

 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 122/521 (23%), Positives = 224/521 (42%), Gaps = 50/521 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G +VL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFMRARGHEVLYICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   K + D+     +   +   +SYD F R++ + +    +   + +   G I +   
Sbjct: 63  AGQDVKTYCDEQHLIQKTAGEAFGLSYDWFGRSSSEENRHLTQAFCEALDRNGLIEERTD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQ 158
              YS+ D  +  D  V        ++ A G Q  N           NP         ++
Sbjct: 123 KMVYSIDDGRFLPDRYVEGTCPHCKFEKARGDQCDNCGRLLDPTDLINPYSAVSGSRNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  +   +  + +L ++ ES  ++  P   ++  +  +  GL D  ++R    WG+
Sbjct: 183 VRDTKHLYLLQTKVEPQLRAWIESKTQW--PQLAKSIAMKHLDEGLIDRGITRD-LKWGV 239

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD--------L 260
            I  D +        + YVW DA   Y+  T    N  G+      +W  D        +
Sbjct: 240 PITKDGKPRDGFENKVFYVWFDAPVEYIGATQEYFNAKGNADGWQSWWRLDQGAVDVTYV 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA ++ +N P  +   + +  ++   G K S S+   +   + +E
Sbjct: 300 QFMGKDNVAFHTVSFPATIIGSNEPWKMVDTLKAFNWLNWYGGKFSTSMNRGVFMDQALE 359

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+ +   G D  +  +  +  VN DLA+ +GN  +R +      + G++P
Sbjct: 360 LLPADYWRWYLISQSPEGSDSSFTWEQFQSAVNKDLADVLGNFANRILKFTESKFGGVVP 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G     ++ + +  S +L E  E  +   + +A   V  +    + Y     PW   K
Sbjct: 420 EGGEAGPQEQKLYADLSALLAEATEAFEAMEMRKAAQAVRRIWVLGNEYLQEAAPWTAFK 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           T+ +RA  ++   + ++R  A+L Q   P  A  I D + V
Sbjct: 480 TDVERAGVIVRHGLNLVRLYAVLAQPLTPFAAQSIADCVGV 520


>gi|145629338|ref|ZP_01785137.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
 gi|144978841|gb|EDJ88564.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
          Length = 548

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 16/321 (4%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 53  ESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFEI 109

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHAIY 274
           P       YVW+DA   Y+ +   L + +G    +FW     A+L H IGKDI+ FH+++
Sbjct: 110 PGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLF 169

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   ++ 
Sbjct: 170 WPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLN 229

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  ++ D   +RVN D+ N + NL SR+   I K ++G +    A    DE++ + 
Sbjct: 230 DRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALFAE 285

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
            +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  + 
Sbjct: 286 FTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMG 345

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +PKLA +
Sbjct: 346 IELFRVLMSYLKPVLPKLAER 366


>gi|257457531|ref|ZP_05622698.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444917|gb|EEV19993.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 791

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 225/517 (43%), Gaps = 49/517 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I++A+ Y N  PH+G+  +++ ADV ARF RL G   L+  GTDE+G      A   G T
Sbjct: 6   ITSALPYVNNIPHLGNLIQVLSADVFARFCRLRGYTSLYVCGTDEYGTATETKALEEGKT 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D      RD+    +IS+D F RT+  +  +  + ++K I   G I +      Y
Sbjct: 66  PRELCDYYHAIHRDIYHWFNISFDYFGRTSTPQQTEIVQGIFKDIEKNGFIKEHTIEQLY 125

Query: 129 SLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE-- 185
                 +  D  V        Y +A+ +     E  G     +  +    S   + PE  
Sbjct: 126 CAHCNRFLADRYVRGTCPHCGYEDARGDQC---EACGKLLEPTELKAPRCSTCGAAPEPR 182

Query: 186 ----------FILPI------------ERRNEVISFVKSGLKDLSLSR---KTFDWGIKI 220
                      I+P             +  N  +   K  L+D    R   +   WGI +
Sbjct: 183 STKHLYIDLPGIVPQYEPWMQKASKEGQWSNNAVQMTKGWLRDGLQERAITRDLKWGIPV 242

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGKDILRFHA 272
           P       + YVW DA   Y++ T    +  G+  K W    +D+ +   IGKD + FH 
Sbjct: 243 PKAGFEDKVFYVWFDAPIGYISITKCFTDLTGTDWKNWWLEQSDVELFQFIGKDNIPFHT 302

Query: 273 IYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P  L+++     K   + S  ++ ++  K SKS G  V         +  D  R+++
Sbjct: 303 VIFPCSLIASGKDWVKLHHISSSEYLNYESGKFSKSKGIGVFGSDAKDSGIPADMWRFYI 362

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD- 387
                   D  +     ++RVN++L   + NL++R+++ + + Y+G+IP   G  +  D 
Sbjct: 363 FYNRPEKNDALFTWKDFQERVNSELVGNLCNLINRTLTFVSRYYNGVIPQRDGPASSRDD 422

Query: 388 -----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
                ES+ +     +++I   ++   +  A  ++ +L S  ++ F   +PW+ ++ +P+
Sbjct: 423 VRFVTESLRAAAKYSIEKITALLEEAELRDAFHELFALSSVANKAFQDGEPWKNREADPE 482

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +A  +L+    +I+ L IL+  ++P+ A+ +   L +
Sbjct: 483 KAEALLFELCYLIKDLLILMHPYMPEYADAVASFLGI 519


>gi|297201071|ref|ZP_06918468.1| methionyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712144|gb|EDY56178.1| methionyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 571

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 239/553 (43%), Gaps = 62/553 (11%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G +VL+   TDEHG     AA+  G+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHEVLYICATDEHGTPAELAAKEQGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D   +++D F R++ +++ +  +   +++++ G I +      
Sbjct: 66  PVAEFCAQAHDAQKAVYDGFALAFDYFGRSSSEQNVEITQHFARRLNENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161
           YS  D  +  D  V        Y  A G Q  N           NP         ++  E
Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S  Q ++  +  +H    P+    I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQHEVEEWVAAHEEEWPQLAASIARK-----WLTEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGSKAKFWPADL-------H 261
           + +P D  P+      + YVW DA   Y+  T  + D +P+    K W  D+        
Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWADLDPENRDWKSWWYDVDTTVRYTE 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEE 319
            + KD + FH + +PA  L    P  K  +   F  + + G K S S    +   + ++ 
Sbjct: 300 FMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDQALDI 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P 
Sbjct: 360 LPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKKRFGEEVPA 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E++  +    +R+L E    M+     +A A + +L S  + Y + + PW   KT
Sbjct: 420 GGEPGEAEAKLGEEIARLLAEYESQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLK 494
           + D A+  L   + +I   A++ + F+P  A  + +   +AD+   + + D+      L 
Sbjct: 480 DKDGAALTLRTAMNLIHLYAVVSEPFIPATAKTMREAFALADDTATWVTADEARALTALT 539

Query: 495 PGFMLHKTFDPIF 507
           PG     T  P+ 
Sbjct: 540 PGIAF--TVPPVL 550


>gi|83858613|ref|ZP_00952135.1| methionyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853436|gb|EAP91288.1| methionyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 568

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 232/522 (44%), Gaps = 58/522 (11%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF RL G DVL    TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFMRLQGHDVLAICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+     + + +   +S+D F RT+  ++ +  +   + +   G I +   
Sbjct: 63  AGQDVRAYCDEQHEIQKSIGEQFGLSWDYFGRTSSPQNAELTQHFAETLEKNGLIAEVVE 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEGYF------- 166
              YS+ D  +  D  V        ++ A G Q  N     +P++ +E            
Sbjct: 123 QQVYSIDDGRFLPDRYVEGTCPNCGFEKARGDQCDNCGKLLDPIELIEPYSAVSGSKNLE 182

Query: 167 --------FRLSAYQDKLLSYYESH---PEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    + +  ++++ ++ ++    P F   I  +     ++  GL+D +++R    
Sbjct: 183 VRDTKHLQLKQTVMEERIRAWVDAADGWPSFAKSIAYK-----WLDEGLRDRTITRD-LK 236

Query: 216 WGIKIPDDPQ-------YIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD-------- 259
           WG+ +  + Q        + YVW DA   Y++ T  + +   G    +W  D        
Sbjct: 237 WGVPVTKNGQPREGFEDKVFYVWFDAPIGYISATREWAEQNGGDWESWWRTDKGADDVRY 296

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIE 315
           +  +GKD + FH + +PA LL +  P       K F+  ++   G K S S    +   +
Sbjct: 297 VEFMGKDNVAFHTVSFPATLLGSEEPWKTVDALKAFN--WLTWYGGKFSTSNKRGVFMDQ 354

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +E +  D  R++L      G D  +  D  +  VN DLA+ +GN V+R +      ++G
Sbjct: 355 ALELLPADYWRWYLTAYGPEGSDAQFTWDHFQSSVNKDLADVLGNFVNRILKFGASRFEG 414

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +IP  G   E++  + +  +  L  I  + +     +A A+  +L +  + Y    +PW 
Sbjct: 415 VIPEGGTPGEAEAWLETEVATRLANIASHYEAMEFRKAAAETRALWAAGNEYLTRAEPWV 474

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             KT+ D+A+  + + + ++R  AI+ Q  +P+ A KI   L
Sbjct: 475 HFKTDKDQAALGVRMGINLVRLCAIVAQPVIPQAAGKILAAL 516


>gi|84502718|ref|ZP_01000837.1| methionyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389113|gb|EAQ01911.1| methionyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 573

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 238/544 (43%), Gaps = 58/544 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFV----DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               +     D  +R  RD      +S+D F R++  ++H   +    ++++ G I +  
Sbjct: 66  PVAEYCAEMHDVQARIARD----FRLSFDHFGRSSGPQNHRLTQHFAGRLAEAGLISEVD 121

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEG-------- 164
               YSL D  +  D  +        ++GA G   +    Q +PV  ++           
Sbjct: 122 EHQMYSLSDGRFLPDRYIEGTCPNCGFEGARGDQCDNCTKQLDPVDLIDPHSTISGSKDL 181

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                   F R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWG
Sbjct: 182 EMRATKHLFLRQSAMKDRLDAWIDSKDDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWG 240

Query: 218 IKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------L 260
           I +       P     + YVW DA   Y+     ++D   G+   ++W  D         
Sbjct: 241 IPVRRGEEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGTDWERWWRTDKGAEDVRYT 300

Query: 261 HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA +L +  P  L   + S  ++  +G + S S G  +   + +E
Sbjct: 301 QFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNFEGGQFSTSRGRGVFMDQALE 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+       D  +     +  VN DLA+ +GN VSR        +   +P
Sbjct: 361 ILPADYWRWWLLSHAPESSDAEFTWANFQASVNKDLADVLGNFVSRVTKFCRSKFGETVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G +   ++++++     L     +M    + ++   + ++    + Y  +  PW   K
Sbjct: 421 EGGDYGPREDALVAELETRLSAYAAHMDAMEVRKSAQDLRAIWVAGNEYLQSAAPWAAYK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKP 495
            +P RA+ ++ +++ +IR  A++   F+P  ++++ + + ++D +    S+ +    L+P
Sbjct: 481 EDPARAAAIVRLSLNLIRLYAVVSAPFLPDASDRLAEAMHLSDRSWPEGSVAEALSLLQP 540

Query: 496 GFML 499
           G+  
Sbjct: 541 GWAF 544


>gi|300175086|emb|CBK20397.2| unnamed protein product [Blastocystis hominis]
          Length = 749

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/512 (23%), Positives = 227/512 (44%), Gaps = 46/512 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ + I++A+ Y N  PH+G+    ++ ADV AR+ R  GL+ L+  GTDE+G      A
Sbjct: 190 KQNILITSALPYVNNVPHLGNLIGCVLSADVFARYCRERGLNTLYVCGTDEYGTATETRA 249

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDT--CRILWKKISDKGDI 119
           Q   +T +   ++     R + D  DI +D F RT TE    DT   + ++K++ ++  +
Sbjct: 250 QADHMTPREICNKFHAIHRAVYDWFDIHFDFFGRTSTEDPRKDTQIAQGIFKRLCEEDQL 309

Query: 120 YKG------CYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +       C+     L D        +  Y  A G   +   N +   E      ++  
Sbjct: 310 VEQEIEQVYCHQCGRFLADRFIEGTCPICGYPKAGGDQCDKCGNLLNATELVNPVCKVGG 369

Query: 172 YQDKLLSYYESHPEFILP---IERR-----------------NEVISFVKSGLKDLSLSR 211
              K+ +    H    LP    E R                 N    ++++GLK   ++R
Sbjct: 370 PTHKVENRVTKHLFLNLPKLEPELRAWVAETSVANDWSSNAINITNGWIENGLKPRCITR 429

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---G 264
               WG  +P +     + YVW DA   Y++ T    N      ++W  P D+ ++   G
Sbjct: 430 D-LKWGTPVPREGYEDKVFYVWFDAPIGYISITA---NYTKEWKQWWQNPKDVKLVQFMG 485

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321
           KD + FH + +P+ L+    P  K  ++    ++ ++  K SKS G  +   +  +  V 
Sbjct: 486 KDNIPFHTVIFPSTLIGTRDPWTKVTQISCTEYLNYEDGKFSKSQGTGVFGDQAKDTNVP 545

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            +  R++L+       D  +  + L ++ N +L   +GN V R +S +    D  +P  G
Sbjct: 546 SEVWRFYLLSNRPEQSDSAFYWEDLAEKNNNELLKNLGNFVHRCLSFVYNRMDATVPPCG 605

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           A TE ++ ++   +  LQ+  E M    +   L   + +    ++Y    +PW + K++P
Sbjct: 606 AKTEREQKLIEAVNETLQKYNEAMMGTHLKAGLKWAMEISRLGNQYLQDAEPWTVLKSDP 665

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++  T+ YV V ++  ++ + + F+P  ++K+
Sbjct: 666 EQCGTICYVAVNLVYLISNVFEPFMPGFSDKV 697


>gi|67474236|ref|XP_652867.1| methionyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56469764|gb|EAL47481.1| methionyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 754

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 232/507 (45%), Gaps = 47/507 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G     ++ ADV AR+ R+ G + L+  GTDE+G    + A   
Sbjct: 16  ILITSALPYCNNVPHLGTLIGCVLSADVYARYCRMRGYNTLYVCGTDEYGTTTEQKALLE 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T +   ++     +++ D  DIS++ F RT+ ++  +  + ++K ++D G IYK    
Sbjct: 76  HCTPQEICNKYYTLHKEVYDWFDISFNYFGRTSTEKQTEITQDIFKHLNDNGYIYKDSVE 135

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
            +Y  + + +  D  V          GA G   ++    +  +E                
Sbjct: 136 QFYCEKCDKFLADRFVEGVCPFCNAPGARGDQCDSCQKLINTVELINPQCKVCHSVPVRR 195

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGI 218
             E  F  L   QDKL ++     E +   E  N      K+ L +L     T D  WG 
Sbjct: 196 SSEHLFIDLPKLQDKLGNWAN---ETMSKYEWPNNCACATKTWLNNLKGRCITRDLKWGT 252

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270
           K+P +     + YVW DA   YL+ T  Y D+      K+W  + HV     +GKD + F
Sbjct: 253 KVPLEGFENKVFYVWFDAPIGYLSITANYTDD----WKKWWMDNEHVELTQFLGKDNIVF 308

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H++ +P+ LL    +  + +K+ +  ++ ++  K SKS G  +   + ++  +  +  RY
Sbjct: 309 HSVLFPSTLLGTGESWTMVRKLATTEYLNYEDCKFSKSNGTGVFGDDAMKTGIPPEVWRY 368

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTES 386
           +L+       D  +  + L ++ N +L   IGNL  R+++  +K++D  IP      TE 
Sbjct: 369 YLLINRPEQSDTVFLWNDLMEKNNNELLKNIGNLAQRTLTFAVKNFDNKIPKKITKITEV 428

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           + +       + +E    M+N  +   L   +++ S  ++Y      W+  K++ +RA  
Sbjct: 429 ELNCEKEIKELYKEYLNAMENVKLKEGLKIAMAISSVGNKYLQDTAAWKTIKSDKERAGD 488

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKI 473
            +Y  + ++  ++++L  ++P+   K+
Sbjct: 489 EIYYALNILYFVSLVLDPYIPEFGKKV 515


>gi|326519270|dbj|BAJ96634.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 594

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 220/517 (42%), Gaps = 45/517 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G      A
Sbjct: 13  RRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGHNVLYVCGTDEYGTATENRA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G +     D+     +++ +  +I++D F RT+  +  + C+ ++ K+ D   + + 
Sbjct: 73  LEEGCSPLQICDKYHAIHKEVYEWFNINFDHFGRTSTPQQTEICQSIFSKLLDNNWLSEN 132

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y    + +  D  V      +            +  G     +   D      E 
Sbjct: 133 TMQQLYCESCQRFLADRFVVGSCPVEGCGNDTARGDQCDRCGRLLNSTELIDPRCKVCEG 192

Query: 183 HP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSRKTF 214
            P          E  L  E+  + I                  +++K GLK   ++R   
Sbjct: 193 IPIVRDTDHLFLELPLLKEQLEKYIDEASATGSWSQNAVRITNAWLKEGLKPRCITRD-L 251

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269
            WG+ +P +     + YVW DA   Y++ T     P+  K    P ++ +   +GKD + 
Sbjct: 252 KWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKDNVP 310

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326
           FH + +P+ LL    N  L K +    ++ ++  K SK+ G  V         +  D  R
Sbjct: 311 FHTVMFPSALLGTGENWTLMKNISVTEYLNYESGKFSKTKGIGVFGNDAKATNIPADVWR 370

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPG 381
           Y+L+       D  +  +GL+ + N +L N +GN + R +S I K     Y  +IP  P 
Sbjct: 371 YYLLSNRPEASDAVFTWEGLQIKHNNELINNLGNFIYRVLSFIAKPEGAGYGSIIPEAPN 430

Query: 382 AFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           A T    +S+      ++++  + M    + + L   +++ SE + Y    + W+L K +
Sbjct: 431 ANTHPLSQSLAETVGNLIEQYIDAMDKVKLKQGLKIAMAISSEGNAYLQESQFWKLYKQD 490

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P   +TV+  +  ++  LA LL+ F+P  +  +   L
Sbjct: 491 PASCATVMKTSAGLVYLLACLLEPFMPSFSKDVLQQL 527


>gi|114766268|ref|ZP_01445255.1| methionyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541469|gb|EAU44514.1| methionyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 570

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 224/526 (42%), Gaps = 57/526 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLFARYQRARGNEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +A+   +S+D F R++  ++H   +     ++++G I +   +  
Sbjct: 66  PVAEYCAEMHEVQSKIAEGFRLSFDHFGRSSSPQNHKLTQHFAGVLAERGLIREVSETQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------------E 161
           YS  D  Y  D            E  +G        Q +PV+ +               E
Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGFEDARGDQCDNCTKQLDPVELINPRSVISGATDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYY---ESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDW 216
            +  +   S  +D+L S+    E  P     I ++  N+       GL+D  ++R   DW
Sbjct: 186 TKHLYLCQSQMKDQLESWIDTREGWPVLTTSIAKKWLND-----GDGLQDRGITRD-LDW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD-------- 259
           GI +       P     + YVW DA   Y+     ++D   G    ++W  D        
Sbjct: 240 GIPVKKGEEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGDDWTRWWRTDKGAEDVTY 299

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 300 TQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN  SR        +  ++
Sbjct: 360 EILPADYWRWWLLSHAPESSDAEFTWENFQSSVNKDLADVLGNFASRVTKFCRSKFGEVV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E +  +++  +  ++E  E+M +  + ++   + +     + Y     PW   
Sbjct: 420 PEDGRTGEREAQLVADLTAKVREYEEHMAHAEVRKSATALRAAWVLGNEYLQDAAPWSTF 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           KT+P+ A+  + + + VIR  A++ Q F+P  + ++   L   D++
Sbjct: 480 KTDPETAAAQIRLALNVIRLYAVISQPFIPDASAQLLQALKTDDDS 525


>gi|300176882|emb|CBK25451.2| unnamed protein product [Blastocystis hominis]
          Length = 647

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/548 (22%), Positives = 243/548 (44%), Gaps = 50/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ ADV AR+ R  GL+ L+  GTDE+G      AQ
Sbjct: 89  QNILITSALPYVNNVPHLGNLIGCVLSADVFARYCRERGLNTLYVCGTDEYGTATETRAQ 148

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDT--CRILWKKISDKGDIY 120
              +T +   ++     R + D  DI +D F RT TE    DT   + ++K++ ++  + 
Sbjct: 149 ADHMTPREICNKFHAIHRAVYDWFDIHFDFFGRTSTEDPRKDTQIAQGIFKRLCEEDQLV 208

Query: 121 KG------CYSGWYSLRDEAYYNDDEV--YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +       C+     L D        +  Y  A G   +   N +   E      ++   
Sbjct: 209 EQEIEQVYCHQCGRFLADRFIEGTCPICGYPKAGGDQCDKCGNLLNATELVNPVCKVGGP 268

Query: 173 QDKLLSYYESHPEFILP---IERRNEVIS-----------------FVKSGLKDLSLSRK 212
             K+ +    H    LP    E R  V +                 ++++GLK   ++R 
Sbjct: 269 THKVENRVTKHLFLNLPKLEPELRAWVAATSVANDWSSNAINITNGWIENGLKPRCITRD 328

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GK 265
              WG  +P +     + YVW DA   Y++ T    N      ++W  P D+ ++   GK
Sbjct: 329 -LKWGTPVPREGYEDKVFYVWFDAPIGYISITA---NYTKEWKQWWQNPKDVKLVQFMGK 384

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGV 322
           D + FH + +P+ L+    P  K  ++    ++ ++  K SKS G  +   +  +  V  
Sbjct: 385 DNIPFHTVIFPSTLIGTRDPWTKVTQISCTEYLNYEDGKFSKSQGTGVFGDQAKDTNVPS 444

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           +  R++L+       D  +  + L ++ N +L   +GN V R +S +    D  +P  GA
Sbjct: 445 EVWRFYLLSNRPEQSDSAFYWEDLAEKNNNELLKNLGNFVHRCLSFVYNRMDATVPPCGA 504

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            TE ++ ++   +  LQ+  E M    +   L   + +    ++Y    +PW + K++P+
Sbjct: 505 KTEREQKLIEAVNETLQKYNEAMMGTHLKAGLKWAMEISRLGNQYLQDAEPWTVLKSDPE 564

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI-FDILFVADENRCFQSLDQRLKPGFMLHK 501
           +  T+ YV V ++  ++ + + F+P  ++K+ + + F  D  +     ++ +  G  ++K
Sbjct: 565 QCGTICYVAVNLVYLISNVFEPFMPGFSDKVCYQLNF--DHGKIPDVFEEVIPAGHKINK 622

Query: 502 TFDPIFPR 509
              PIF +
Sbjct: 623 IL-PIFKK 629


>gi|194366698|ref|YP_002029308.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|226710935|sp|B4SRG1|SYM_STRM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194349502|gb|ACF52625.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 693

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 199/495 (40%), Gaps = 42/495 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  R+ G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    +       + K+   G I +   + +
Sbjct: 67  PETFIANIQASHERDFA-AFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  V       G+  QY        A + P    E               
Sbjct: 126 YDPAKGMFLPDRYVKGICPNCGSADQYGDNCEVCGATYAPTDLKEPRSVVSGATPEMRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF +  +   L  +            +  E ++  + GL+   +SR    +G +IP 
Sbjct: 186 EHFFFEVGHFDGFLRDWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFEIPG 244

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL++   L +  G       +A       H +GKDI+ FH ++WP
Sbjct: 245 QPGKYFYVWLDAPIGYLSSFQTLCSRIGEDFEAHLRAGTSTELHHFLGKDIVNFHGLFWP 304

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIAC 335
           A L       P ++  +G++   G K+SKS G  +     ++  +  +ALRY+   +   
Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYFAAKSGG 364

Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
           G D    +      RVNADL     NL SR    I K +DG++    A    D +     
Sbjct: 365 GVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGLL----AAQLPDAAQYQRF 420

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTV 452
              L  IRE  +      A+   ++L  E +RY D  KPW + K     A    V    +
Sbjct: 421 VDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCSQGL 480

Query: 453 EVIRQLAILLQAFVP 467
            + R L   L+  +P
Sbjct: 481 NLFRVLVTALKPVLP 495


>gi|145507618|ref|XP_001439764.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406959|emb|CAK72367.1| unnamed protein product [Paramecium tetraurelia]
          Length = 840

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 231/512 (45%), Gaps = 45/512 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ AD  AR+ RL G + L+  GTDE+G     
Sbjct: 268 KGKRNVLITSALPYVNNVPHLGNIIGCVLSADTFARYSRLRGYNTLYVCGTDEYGTATEV 327

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +    +     +++ D  DI +D F RT+   H +  + ++  +  K    
Sbjct: 328 KAIQENMTPQQICTKYFEIHKNVYDWFDIDFDYFGRTSTPVHTEITQEIFNHLHPKYTTQ 387

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRL 169
           K     + S   + Y  D  V        Y  A G   ++     +PV+ +  + Y  + 
Sbjct: 388 KTTPQTFCS-HCKMYLADRYVSGTCPHCQYDDARGDQCDSCGKLLDPVELINSKCYICKN 446

Query: 170 SAYQDKLLSYYESHPEFILPIER---------------RNEVISFVKSGLKDLSLSRKTF 214
                     Y + PE    +E+                N   +++K GLK+  ++R   
Sbjct: 447 KPEIKDTKHIYINLPEIQERLEKWIHSTSKSGQWSQNSYNVSKAWLKLGLKERCITRD-L 505

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG+++P  +    + YVW DA   YL+ T    N      ++W  P ++ +   +GKD 
Sbjct: 506 KWGVQVPLEEYKDKVFYVWFDAPIGYLSITA---NFIKDWKQWWMNPENVELFQFMGKDN 562

Query: 268 LRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDA 324
           + FH + +P+ L+   L   L K + +  ++ ++  K SKS G  V        E+  + 
Sbjct: 563 VPFHTVIFPSTLMGTGLDYTLLKTISTTEYLNYEDGKFSKSRGTGVFGDNAQNTEIPNEI 622

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GA 382
            RY+L+       D  +  +    + N +L   +GNLV+R+++ I K+Y+  IP      
Sbjct: 623 FRYYLLANRPEKSDTVFTWNDFANKNNNELLPNLGNLVNRALNFIYKNYNKQIPQVELNQ 682

Query: 383 FTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            T  DE  +++  ++   E  E  +   I  AL + + L S V++Y   +K WE ++   
Sbjct: 683 LTPKDEEFINLFLNKFKTEYLEAFEKVEIKDALRKAMELSSLVNKYIQDEKAWEKEQKES 742

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            R+  +L+V V  IR ++ L++ F+P ++ KI
Sbjct: 743 KRSDVILFVAVNAIRFVSALIEPFMPSVSAKI 774


>gi|327310210|ref|YP_004337107.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946689|gb|AEA11795.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 568

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 227/512 (44%), Gaps = 46/512 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y  + PH+G+    ++ ADV AR+ RL G +V+F +G+D HG  I   A  
Sbjct: 3   KFVIGSAWPYVQSVPHLGNMIGSVLSADVYARYLRLRGHEVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + +  +      ++    +IS+D +  T    H +  +  +KKI + G ++    
Sbjct: 63  LGVDPQDYAMRMHGIVAELFRRWNISFDLYTHTHSNTHIEFTKDFFKKIYENGYVFTQED 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP--------------VQW 159
              Y   D+ +  D            E  +G   +       P               +W
Sbjct: 123 ELPYCPNDKIFLPDRFVIGKCPYCGYERARGDQCERCGRLLEPRLLIEPRCAVCGAKPEW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + ++  L   +D +  Y E + E  LP   R   +  +K GL+  +++R    WGI 
Sbjct: 183 RRTKHWYLDLRKLEDAVRRYVEGNKE--LPQNAREMALGILKEGLRPRAITRDN-KWGIP 239

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTG-YLDN---PDGSKAKFW--PADLHV--IGKDILR 269
              P      +YVW +A+  Y++    Y +    PD  + +FW  P+   V  +GKD + 
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVKEYFEKRGEPDRWR-EFWLDPSTKAVFFVGKDNIP 298

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHG--FILHKGEKISKS--LGNVIDPIEVIEEVGVDAL 325
           FH I  PA +++       ++ +    ++ ++G+K SKS   G  ID  E ++ + VD  
Sbjct: 299 FHVIILPALIMANGGGYTTRLTTSSTEYLNYEGDKFSKSRRWGIWID--EALKLMPVDYW 356

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV      +D  +      + VN  L + +GN   R +S I   + G++P PG  T 
Sbjct: 357 RFVLVYMRPENRDVDFTWQTAVEVVNKVLNDDVGNFAHRVLSFIKTRFGGVLPGPGPSTP 416

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   +   ++ ++    +     +  AL   + +  E ++Y + + PW+L K  P+ A 
Sbjct: 417 PDAEFVEAVAKYVKSAEAHYDRIELKEALMDAVEIAREGNKYLNLRAPWQLVKERPEEAG 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           TV+Y + + +  LA LL   +P  A K++ ++
Sbjct: 477 TVMYNSYKALMALAALLYPVIPSSAEKLWSMM 508


>gi|302526675|ref|ZP_07279017.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302435570|gb|EFL07386.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 359

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 13/235 (5%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +HV+GK ILRFHA+YWPA LLSA   LP  +F H ++   G KISKS GN + P ++I++
Sbjct: 137 VHVLGKGILRFHAVYWPALLLSAGERLPDTIFVHDYLTVYGAKISKSAGNTVRPTDLIDQ 196

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DA+R++L+RE+A   D  + +D L  R + +LANG+GNLV R +S+  +   G I  
Sbjct: 197 YGADAVRWWLLREVAPLGDTDFTEDRLIARADDELANGLGNLVHRVLSLARR--TGRIVP 254

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G       ++ S+  R    I   + +     A   ++ ++++ +RY +  +PW L+  
Sbjct: 255 AGPL----RTVHSLADR----IDAALADFDFRSATGALVQVIADANRYVEQTRPWALRGD 306

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             D+A   L   V   R+LA  L  F+P  A ++   L   +  R +  L Q+ +
Sbjct: 307 ELDQA---LGTVVSTCRELATELSPFLPDRAARLHAQLDRGEPARLYPRLRQQPR 358


>gi|190575365|ref|YP_001973210.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|226710936|sp|B2FPT0|SYM_STRMK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|190013287|emb|CAQ46921.1| putative methionyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 692

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 197/495 (39%), Gaps = 42/495 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  R+ G    F    D HG  I  AA+ AGVT
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    +       + K+   G I +   + +
Sbjct: 67  PETFIANIQASHERDFA-AFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  V       G+  QY        A + P    E               
Sbjct: 126 YDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCGATYAPTDLKEPRSVISGATPEMRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF +  +   L  +            +  E ++  + GL+   +SR    +G +IP 
Sbjct: 186 EHFFFEVGHFDAFLREWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFQIPG 244

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL++   L    G       +A       H IGKDI+ FH ++WP
Sbjct: 245 QPGKYFYVWLDAPIGYLSSFQTLCGRIGEDFEAHLRAGTSTELHHFIGKDIVNFHGLFWP 304

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIAC 335
           A L       P ++  +G++   G K+SKS G  +     ++  +  +ALRY+   +   
Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYYAAKSGG 364

Query: 336 GKDGFYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
           G D      G    RVNADL     NL SR    I K +DG +    A    D +     
Sbjct: 365 GVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGQL----AAQLPDAAQYQRF 420

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTV 452
              L  IRE  +      A+   ++L  E +RY D  KPW + K     A    V    +
Sbjct: 421 VDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCSQGL 480

Query: 453 EVIRQLAILLQAFVP 467
            + R L   L+  +P
Sbjct: 481 NLFRVLVTALKPVLP 495


>gi|145642100|ref|ZP_01797670.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
 gi|145273179|gb|EDK13055.1| tellurite resistance protein TehB [Haemophilus influenzae 22.4-21]
          Length = 548

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 163/321 (50%), Gaps = 16/321 (4%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 53  ESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFEI 109

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHAIY 274
           P       YVW+DA   Y+ +   L   +G    +FW     A+L H IGKDI+ FH+++
Sbjct: 110 PGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLF 169

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   ++ 
Sbjct: 170 WPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLN 229

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  ++ +   +RVN D+ N + NL SR+   I K ++G +    A    DE++ + 
Sbjct: 230 DRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKL----ADKLEDEALFAE 285

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
            +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K     A    V  + 
Sbjct: 286 FTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMG 345

Query: 452 VEVIRQLAILLQAFVPKLANK 472
           +E+ R L   L+  +PKLA +
Sbjct: 346 IELFRVLMSYLKPVLPKLAER 366


>gi|326519092|dbj|BAJ96545.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 635

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 220/517 (42%), Gaps = 45/517 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G      A
Sbjct: 54  RRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGHNVLYVCGTDEYGTATENRA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G +     D+     +++ +  +I++D F RT+  +  + C+ ++ K+ D   + + 
Sbjct: 114 LEEGCSPLQICDKYHAIHKEVYEWFNINFDHFGRTSTPQQTEICQSIFSKLLDNNWLSEN 173

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y    + +  D  V      +            +  G     +   D      E 
Sbjct: 174 TMQQLYCESCQRFLADRFVVGSCPVEGCGNDTARGDQCDRCGRLLNSTELIDPRCKVCEG 233

Query: 183 HP----------EFILPIERRNEVI------------------SFVKSGLKDLSLSRKTF 214
            P          E  L  E+  + I                  +++K GLK   ++R   
Sbjct: 234 IPIVRDTDHLFLELPLLKEQLEKYIDEASATGSWSQNAVRITNAWLKEGLKPRCITRD-L 292

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269
            WG+ +P +     + YVW DA   Y++ T     P+  K    P ++ +   +GKD + 
Sbjct: 293 KWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKDNVP 351

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326
           FH + +P+ LL    N  L K +    ++ ++  K SK+ G  V         +  D  R
Sbjct: 352 FHTVMFPSALLGTGENWTLMKNISVTEYLNYESGKFSKTKGIGVFGNDAKATNIPADVWR 411

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPG 381
           Y+L+       D  +  +GL+ + N +L N +GN + R +S I K     Y  +IP  P 
Sbjct: 412 YYLLSNRPEASDAVFTWEGLQIKHNNELINNLGNFIYRVLSFIAKPEGAGYGSIIPEAPN 471

Query: 382 AFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           A T    +S+      ++++  + M    + + L   +++ SE + Y    + W+L K +
Sbjct: 472 ANTHPLSQSLAETVGNLIEQYIDAMDKVKLKQGLKIAMAISSEGNAYLQESQFWKLYKQD 531

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P   +TV+  +  ++  LA LL+ F+P  +  +   L
Sbjct: 532 PASCATVMKTSAGLVYLLACLLEPFMPSFSKDVLQQL 568


>gi|116515014|ref|YP_802643.1| hypothetical protein BCc_072 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256868|gb|ABJ90550.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 547

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 219/511 (42%), Gaps = 58/511 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A  Y N   H+GH  E I AD+  R+HR+    V+F    D HG  I   ++N
Sbjct: 6   DKILVTCAFPYANGDIHLGHLLEQIQADIWVRYHRMKHRSVVFICSDDTHGTAIMLKSKN 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             ++++  +  +    +  +D L  S  +D +  T  + + D C  ++K +  K  I + 
Sbjct: 66  MNISSEKLI--HDIGIKHKSDFLKFSIIHDYYSSTHSQVNKDLCCNIFKILKKKKFIKEK 123

Query: 123 CYSGWY------------------SLRDEAYYNDDEVYKGADGQYYNAQH--NPVQWM-- 160
             S  Y                    +    Y D+  Y GA   +YNA    NP+  +  
Sbjct: 124 IISQLYDKKLNMFLPDRFIKGICPKCKSNNQYGDNCDYCGA---FYNAIELLNPISELSK 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 +    FF+LS ++  L ++  S       + + N+++S     L   ++SR   
Sbjct: 181 TKPIIKQSNHLFFKLSYFKKFLKTWINSGITQKSILNKLNDLLS---KKLCSWNISRDKP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD-----LHVIGKDI 267
            +G +IP       YVW+DA   Y++      N + +     FW         H IGKDI
Sbjct: 238 YFGFEIPGYIDKFFYVWMDAPIGYISCIQEFCNINKTVNFNDFWSKHSKYQLFHFIGKDI 297

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH ++WPA L       P  +F HG++     K+SKS G++I   + +     D+LRY
Sbjct: 298 IYFHCLFWPAILEGCEYRKPTNIFVHGYVTLNKLKLSKSKGSIITANQWLSYFDSDSLRY 357

Query: 328 FLVREIACGKD----GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +   +++   +      YD      R+N+D+ N + NL SRS    LK Y   I +    
Sbjct: 358 YFASKLSNNIEDIEINLYD---YAYRINSDIVNNVINLASRSY-FFLKKYFFSILSNNLL 413

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NP 441
            E          + ++   E  +  LI   + ++  L  + ++YF+ QKPW L K     
Sbjct: 414 KEKLYKKFVSSIKDIENFFEKRKFSLI---IQKIRFLSQKANKYFNDQKPWVLIKNIIYK 470

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +   +  +++ + R L   L+  +P L  K
Sbjct: 471 SKVHDICSLSINLFRILMTFLKPIMPTLVKK 501


>gi|294676114|ref|YP_003576729.1| methionyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474934|gb|ADE84322.1| methionyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 569

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 217/518 (41%), Gaps = 46/518 (8%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRGHEVMFICATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +A    +S+D F R++  ++    +   K ++D+G I +      
Sbjct: 66  PVADYCAEMHDVQAAIAGGFRLSFDHFGRSSSPQNRALTQHFAKALADQGLIREVTEKQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV---------------QWME 161
           YS+ D  +  D            E  +G        Q +PV               +  E
Sbjct: 126 YSVTDGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPRSVISGSTDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            +  F R SA +DKL ++ +S  ++ +      +   F   GL+D  ++R    WG+   
Sbjct: 186 TKHLFLRQSAMKDKLAAWIDSKTDWPVLSTSIAKKWLFDGEGLQDRGITRD-LSWGVPAQ 244

Query: 222 DDPQ-------YIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD--------LHVIGK 265
            D          + YVW DA   Y+  T  + +   G  A++W  D           +GK
Sbjct: 245 FDGAPWAGMEGKVFYVWFDAPIEYIAGTQEWAEKTGGDWARWWRLDQGAEDVTYTQFMGK 304

Query: 266 DILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D + FH + +P+ +L +  P  L   + S  ++ + G + S S G  +   + +  +  D
Sbjct: 305 DNVPFHTLSFPSTILGSAEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALGILPSD 364

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +P     
Sbjct: 365 YWRWWLLSHAPESADAEFTWENFQASVNKDLADVLGNLVSRVTKFCNSKFGTEMPATVVL 424

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           TE + ++++     L    + M    + RA  ++ +L    + Y  A  PW + KT+   
Sbjct: 425 TERETALMAQFRDGLAAYEKAMDEIHVRRAAEELRALWVLGNEYLQAAAPWSVVKTDEAA 484

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           A  ++   + +IR  A+L + F+P  A  I   L   D
Sbjct: 485 ARGIIAFALNLIRLYAVLSRPFIPDAAQAIMTALNCDD 522


>gi|260425221|ref|ZP_05779201.1| methionyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260423161|gb|EEX16411.1| methionyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 570

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 222/526 (42%), Gaps = 57/526 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGNEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +A+   +S+D F R++  ++H   +     ++++G I +      
Sbjct: 66  PVAEYCAEMHEVQARIAEGFRLSFDHFGRSSSPQNHALTQHFAGVLAERGLIREVSERQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YS  D  +  D            E  +G        Q +PV  +        +S   D  
Sbjct: 126 YSPTDGRFLPDRYIEGTCPNCGFEDARGDQCDNCTKQLDPVDLINPRSV---ISGATD-- 180

Query: 177 LSYYESHPEFILPIERRNEVISFVKS--------------------GLKDLSLSRKTFDW 216
           L   E+   F+   + R E+  ++ S                    GL+D  ++R   DW
Sbjct: 181 LEMRETKHLFLCQSQIRTEIEDWIDSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD-------- 259
           GI +       P     + YVW DA   Y+  +  ++D   G    ++W  D        
Sbjct: 240 GIPVKKGAEDWPGMEGKVFYVWFDAPIEYIACSQEWVDAGKGDDWERWWRTDKGAEDVTY 299

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 300 TQFMGKDNVPFHTLTFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN  SR        +  ++
Sbjct: 360 EILPADYWRWWLLSHAPESSDAEFTWENFQTSVNKDLADVLGNFASRVTKFCRSKFGEVV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G     +E +++  +  ++E  E+M +  + ++ A + +     + Y     PW   
Sbjct: 420 PEGGTPGAREEQLIADLTAKVREYEEHMAHAEVRKSAAALRAAWVLGNEYLQEAAPWSTF 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           KT+P+ A+  + + + VIR  A++ Q F+P  + ++   L   D++
Sbjct: 480 KTDPEAAAAQIRLALNVIRLYAVISQPFIPDASAQLLTALNTTDDS 525


>gi|254510427|ref|ZP_05122494.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534138|gb|EEE37126.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 577

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/524 (21%), Positives = 223/524 (42%), Gaps = 49/524 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 8   RILITSAIPYINGIKHLGNLIGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAK 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +         D+A+   +S+D F R++  ++    +    K+ + G I +   
Sbjct: 68  AGKPVAEYCADMYAVQADIANRFGLSFDHFGRSSSDQNKHLTQHFAGKLEEAGLIREVSE 127

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164
              YS  D  +  D  +            +G   +    Q +P   +E            
Sbjct: 128 KQVYSNTDGRFLPDRYIEGTCPNCGYDRARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 187

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 188 VRETKHLYLRQSALKDQLDAWIDSKSDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 246

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+   G     +G       ++W  D        
Sbjct: 247 PVKKGDQDWPGMEGKVFYVWFDAPIEYIACAGEWAEANGKTDADWERWWRTDKGADDVRY 306

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA +L +  P  +   + S  ++ + G + S S G  +   + +
Sbjct: 307 VQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 366

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 367 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEAV 426

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G F   ++ +++  ++ ++    +M+   + ++  ++ ++    + Y  +  PW   
Sbjct: 427 PEGGEFGAREQELIAELTKRIRAYEGHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSTF 486

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           K +P +A+  + + + +IR  A+L   F+P+ + ++   +   D
Sbjct: 487 KEDPAQAAAQVRLGLNLIRLYAVLSAPFIPETSARMLSAMNTLD 530


>gi|91086451|ref|XP_969201.1| PREDICTED: similar to AAEL014709-PA [Tribolium castaneum]
 gi|270010323|gb|EFA06771.1| hypothetical protein TcasGA2_TC009707 [Tribolium castaneum]
          Length = 926

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 245/548 (44%), Gaps = 62/548 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    +++ DV ARF R+   + LF  GTDE+G      A   
Sbjct: 258 ILITSALPYVNNVPHLGNIIGCVLSSDVFARFCRICNYNTLFIGGTDEYGTATETKALEE 317

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +   D+     +D+ +  +IS+D F R++  +  + C+ ++ ++++ G ++     
Sbjct: 318 GLSCQAICDKYYAIHKDIYNWFNISFDYFGRSSSPQQTELCQDMFLQLNNNGFMFTEAVE 377

Query: 126 GWYSLRDEAYYNDDEVYKGAD-----------------GQYYNAQH--NP--------VQ 158
             +  + + Y  D  V  G                   G+  NA    NP         +
Sbjct: 378 QLHCEKCDRYLADRFVEGGCPHPGCNYEDARGDQCDGCGKLVNAVELKNPRCKICRSTPK 437

Query: 159 WMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFD 215
                 +F  L   +  LL +  +S P +        +VI  ++++ GLK   ++R    
Sbjct: 438 LKTSNQFFIDLPKLEPLLLHWMKQSAPGW----SSNAQVIGKAWIREGLKPRCITRD-LK 492

Query: 216 WGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI------GK 265
           WG+ +P  D    + YVW DA   Y++    ++     K + W  P   H I       K
Sbjct: 493 WGVPVPLKDFKDKVFYVWFDAPIGYMS----INKAYTEKWEEWWRPKPEHKITLYQFMAK 548

Query: 266 DILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FHA+ +PA LL AN        + +  ++ ++  K SKS G  V         +  
Sbjct: 549 DNVPFHAVMFPACLLGANRGYITVSHIMATEYLNYEDGKFSKSRGVGVFGNDARDTGIPS 608

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+      +D  +    L  + N++L N +GN ++R++     +++  +P    
Sbjct: 609 DVWRFYLLYVRPESQDSSFSWSDLATKNNSELLNNLGNFINRALVFAKNNFNCTVPE-MQ 667

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            T+ D ++L +C+R L+     ++   +   +  ++S+    ++Y    +PW L K  P+
Sbjct: 668 LTKDDFTLLVLCTRELKGYVNCLEKCKLRDGIRHILSISRLGNQYMQFNQPWVLLKGTPE 727

Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGF 497
              RA+TV+ +   +   LA LL  ++P  +N +   L  A+     +S++  Q L PG 
Sbjct: 728 EKVRAATVVGLCCNIAALLATLLHPYMPDTSNTLKKQLNCANTALTPESIEIRQLLPPG- 786

Query: 498 MLHKTFDP 505
             HK  +P
Sbjct: 787 --HKLGNP 792


>gi|217970006|ref|YP_002355240.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507333|gb|ACK54344.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 733

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 221/532 (41%), Gaps = 63/532 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH    I AD+  R+ R+ G  V +    D HG  +   A+  
Sbjct: 4   KLLVTNALPYANGDIHLGHLVGYIQADIWVRYQRMRGHSVHYVCADDTHGTPVMLRAEKE 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  +++ +  + RD      +++D++  T    +      ++ ++   G I     
Sbjct: 64  GLTPEQLIERVHGEHLRDFT-AFGVAFDNYHSTHSAENRFYAEDIYARLKAGGLIDTRSI 122

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------------ 161
             +Y    E +  D     E  K GA  QY        A + P +               
Sbjct: 123 EQYYDPVKEMFLPDRFIKGECPKCGAPDQYGDNCEACGAAYAPTELKNPYSAVSGAKPVL 182

Query: 162 --EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV--------KSGLKD 206
              E YFFRLS     A+  +      +  E  L +E  N++  ++        ++ L D
Sbjct: 183 KTSEHYFFRLSDERAVAFLREWTRGTNAAGERRLQMEAANKMKEWLGENATEEGENTLSD 242

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------- 259
             +SR    +G +IP  P    YVW+DA   YL +   L     +  +    +       
Sbjct: 243 WDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYLASFRNLAAKRAAAGETIAVEDYTDAAR 302

Query: 260 --------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
                   +H IGKDIL FHA++WPA L  A    P ++  +GF+   G K+SKS G  I
Sbjct: 303 AAAAGTEMVHFIGKDILYFHALFWPAMLKFAGYATPSRLCVNGFLTVDGAKMSKSRGTFI 362

Query: 312 DPIEVI-EEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                I +++  + LRY+   +     +D   + D +  +VN++L     N+ SR    I
Sbjct: 363 TAHSYIAQKLDPEWLRYYFAGKSNGTMEDVDLNLDDMIAKVNSELVGKFVNIASRCAGFI 422

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K +DG +    A   ++ +      RV     E   +    RAL +V+ L    ++Y +
Sbjct: 423 GKRFDGRLGEADAAACAEFAAAWSEGRVATAFEERDYS----RALREVMRLADLANQYVN 478

Query: 430 AQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             KPWEL +     A   TV    + + R L   L+  +P LA ++   L +
Sbjct: 479 DHKPWELARQEGQEARLHTVCSTALTMFRDLTRYLKPVLPALAAQVETFLAI 530


>gi|297849444|ref|XP_002892603.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338445|gb|EFH68862.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 583

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 232/524 (44%), Gaps = 61/524 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 13  KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+     +++ D  DIS+D F RT+  +H   C+ ++ K+ +   I + 
Sbjct: 73  LEENRTPREICDKYHAIHKEVYDWFDISFDQFGRTSTPQHTQVCQEIFNKLWENKLISEN 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWM----------- 160
                Y      +  D  V        Y  A G    +     NP + +           
Sbjct: 133 TIQQLYCDTCNKFLADRLVEGSCPLCNYDSARGDQCESCGKLLNPTELIAPRCKVCQTTP 192

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRKTF 214
              + +  F  L   + +L +Y       +     RN V +   +++ GL+   ++R   
Sbjct: 193 EIRDTDHLFIDLPKLKAQLEAYINGTS--VRGSWSRNAVQTTNAWIREGLQQRCITRD-L 249

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264
            WG+ +P +     + YVW DA   Y++ T         +  NP  ++          +G
Sbjct: 250 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEQWWKNPKNAEL------YQFMG 303

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321
           KD + FH + +P+  L    N  L K V    ++ ++G K SKS G  +   +V +  + 
Sbjct: 304 KDNVPFHTVMFPSTQLGTGENWTLMKTVSVTEYLTYQGGKFSKSKGVGLFGNDVKDTNIP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMI 377
           V+  RY+L+       D  ++ + L+ ++N +L   +GN V+R VS I K     Y  +I
Sbjct: 364 VEVWRYYLLINRPEVSDTSFEWEDLQAKLNDELLKNLGNFVNRVVSFIAKPENIGYGSII 423

Query: 378 P-TPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           P  PGA  ES +  +S+  +V   ++E  E M+   + + L   + +  E + Y    + 
Sbjct: 424 PDAPGA--ESHQLTMSLSEKVGKLVEEYVEAMEKVKLKQGLKTAMLISGEGNAYLQTSEF 481

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           W+L K +    + V+     ++  LA LL+ F+P  ++++F  L
Sbjct: 482 WKLYKEDKPSCAIVVRSAAGLVHLLARLLEPFMPSFSHEVFKQL 525


>gi|163738597|ref|ZP_02146011.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161387925|gb|EDQ12280.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 575

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 224/531 (42%), Gaps = 49/531 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG    
Sbjct: 1   MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +       +A    +S+D F R++  ++H   +    K++++G I
Sbjct: 61  LAAAKAGKPVADYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEQGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +      YS  D  +  D            E  +G   +    Q +P   +        
Sbjct: 121 REVTEQQVYSHTDGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLIDPRSAISG 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E +  +   S  +D+L  +  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDDWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADL-- 260
            DWG+ +       P     + YVW DA   Y+  +    + +G       ++W  D+  
Sbjct: 240 LDWGVPVKKGDADWPGMEGKVFYVWFDAPIEYIAASREWADANGKTDADWQRWWRTDMGA 299

Query: 261 ------HVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                   +GKD + FH + +PA +L +  P  +   + S  ++ + G + S S G  + 
Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           Y   +P    + E++++++   S  +     +M    + ++  ++ ++    + Y  +  
Sbjct: 420 YGEAVPAGNDYGEAEQALIDEISTRVTAYEGHMAAMDVRKSAQELRAIWVAGNEYLQSVA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           PW + KT+PD+A+  + + + +IR  A+L   F+P    ++   L   D +
Sbjct: 480 PWSVFKTDPDQAAAQVRLGLNLIRLYAVLSAPFIPDATERLLAALQTEDRS 530


>gi|56477937|ref|YP_159526.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|68565963|sp|Q5P239|SYM_AZOSE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56313980|emb|CAI08625.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 718

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 214/529 (40%), Gaps = 61/529 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH    I  D+  R+ R+ G  V +    D HG  +   A+  
Sbjct: 4   KILVTNALPYANGDIHLGHLVGYIQGDIWVRYQRMRGNTVHYVCADDTHGTPVMLRAEKE 63

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  + + +  + RD  D   +++D++  T    +      ++ K+     I     
Sbjct: 64  GITPEALIGRVHGEHLRDFTD-FGVAFDNYHSTHSVENRAYAEDVYTKLKAAELIDTRAI 122

Query: 125 SGWYSLRDEAYYND----DEVYK-GADGQY------YNAQHNPVQWME------------ 161
             +Y    E +  D     E  K GA  QY        A + P +               
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAADQYGDNCEACGAAYAPTELKNPHSAVSGAKPVL 182

Query: 162 --EEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKD 206
              E YFFRLS     A+  +      +     L +E  N        E +    + L D
Sbjct: 183 KTSEHYFFRLSDPRAVAFLREWTRGTNAAGTRRLQVEAANKMKEWLGDETVGDGGNTLSD 242

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL----------DNPDGSKAKFW 256
             +SR    +G +IP  P    YVW+DA   Y  +   L          D  D  +A+  
Sbjct: 243 WDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYFASFRNLAEQRGDIAVDDFTDAVRAETA 302

Query: 257 PADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             ++ H IGKDIL FHA++WPA L  A    P ++  +GF+   G K+SKS G  I    
Sbjct: 303 GTEMVHFIGKDILYFHALFWPAMLRFAGYRTPTQLCVNGFLTVDGAKMSKSRGTFITARS 362

Query: 316 VIEE-VGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +   +  + LR YF  +     +D     D +  +VN+DL     N+ SR    I K +
Sbjct: 363 YVSRGLNPEWLRYYFATKSNGTMEDVDLSLDDMVAKVNSDLVGKYVNIASRCAGFIAKRF 422

Query: 374 DGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           DG +        +D E+  +  +     I    + +   RAL +++ L    ++Y +  K
Sbjct: 423 DGKLGASDPQATADFEAAFAAGT-----IAHAYEERDYGRALREIMRLADLANQYVNDHK 477

Query: 433 PWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           PWEL K     A    V    +   R L + L+  +P LA K+   L +
Sbjct: 478 PWELAKQEGQEAHLHVVCSTALTHFRDLTLYLKPVLPALAQKVEAFLAI 526


>gi|83941176|ref|ZP_00953638.1| methionyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846996|gb|EAP84871.1| methionyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 570

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 219/517 (42%), Gaps = 47/517 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGQEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +A+   +S+D F R++  ++    +     + D+G I +      
Sbjct: 66  PVAEYCAEMHEVQARIAEGFGLSFDHFGRSSSAQNKALTQHFAAALYDQGLIEEVEQRQI 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161
           YS  D  +  D            E  +G        Q +P               ++   
Sbjct: 126 YSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLEMRA 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +  F R S  +DKL  +  S  ++ +      +       GL+D  ++R   DWG+ + 
Sbjct: 186 TKHLFLRQSQMKDKLNEWINSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGVPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LHVIG 264
                 P     + YVW DA   Y+     ++D   GS  + W      AD       +G
Sbjct: 245 RGDADWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +E +  
Sbjct: 305 KDNVPFHTLSFPATIMGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEILSA 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P  G 
Sbjct: 365 DYWRWWLLSHAPETSDAEFTWENFQSSVNKDLADVLGNFISRITKFCRSKFSEDVPAAGE 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           +   + ++++  +  +   +  M+   + ++ A++ ++ +  + Y  AQ PW   KT+PD
Sbjct: 425 YGPEEHALIADLTERVARYQTAMEAMEVRKSAAELRAIWAAGNEYLQAQAPWTTFKTDPD 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +A+  + + + +I   A+L   F+P  A  + D + V
Sbjct: 485 KAAAQVRLALNLIPLYAVLSAPFIPTAAASMLDSMKV 521


>gi|254522917|ref|ZP_05134972.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720508|gb|EED39033.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 693

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 197/495 (39%), Gaps = 42/495 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++TA+ Y N   H+GH    I AD+  R  R+ G    F    D HG  I  AA+ AG+T
Sbjct: 7   VTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEKAGIT 66

Query: 69  TKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + F+    + + RD A    +++D +  T    +       + K+   G I +   + +
Sbjct: 67  PETFIANIQAGHERDFA-AFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSVAQF 125

Query: 128 YSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------------E 162
           Y      +  D  V       G+  QY        A + P    E               
Sbjct: 126 YDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCGATYAPTDLKEPRSVISGATPEMRDS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF +  +   L  +            +  E ++  + GL+   +SR    +G +IP 
Sbjct: 186 EHFFFEVGHFDAFLRDWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFQIPG 244

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL++   L    G       +A       H IGKDI+ FH ++WP
Sbjct: 245 QPGKYFYVWLDAPIGYLSSFQTLCGKLGEDFESHLRAGTSTELHHFIGKDIVNFHGLFWP 304

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIAC 335
           A L       P ++  +G++   G K+SKS G  +     ++  +  +ALRY+   +   
Sbjct: 305 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYYAAKSGG 364

Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
           G D    +      RVNADL     NL SR    I K +DG +    A    D +     
Sbjct: 365 GVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGQL----AAQLPDAAQYQRF 420

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTV 452
              L  IRE  +      A+   ++L  E +RY D  KPW + K     A    V    +
Sbjct: 421 VDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCSQGL 480

Query: 453 EVIRQLAILLQAFVP 467
            + R L   L+  +P
Sbjct: 481 NLFRVLVTALKPVLP 495


>gi|254440533|ref|ZP_05054027.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198255979|gb|EDY80293.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 570

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 221/524 (42%), Gaps = 57/524 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLIGSQLPADLYARYLRGRGHEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      D+A    +S+D + R++  ++    +     ++D G I +   +  
Sbjct: 66  PVADYCAEMWTVQADLATRFGLSFDHYGRSSSLQNRALTQHFAGVLADNGLIEERMETQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YS  D  Y  D            E  +G        Q +PV  +     +  +S   D  
Sbjct: 126 YSHEDGRYLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINP---YSTISGSTD-- 180

Query: 177 LSYYESHPEFILPIERRNEVISFVKS--------------------GLKDLSLSRKTFDW 216
           L   ++   ++L  + ++E+ +++ S                    GL+D  ++R   DW
Sbjct: 181 LEMRDTKHLYLLQSKLKDEIEAWIDSQTGWPVLTTSIAKKWLNDGDGLQDRGITRD-LDW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-------- 259
           G+ +       P     + YVW DA   Y+       +  G +  A++W  D        
Sbjct: 240 GVPVMRGDAPWPGMEDKVFYVWFDAPIEYIACAQEWSDATGGQDWARWWRTDKGADDVRY 299

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA ++ +  P  +  +  S  F+ + G + S S G  +   + +
Sbjct: 300 TQFMGKDNVPFHTLSFPATIIGSGEPWKRVDYLKSFNFLNYDGGQFSTSRGRGVFMDQAL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  D  +   N DLA+ +GN VSR        +   +
Sbjct: 360 EILPADYWRWWLLSRAPETSDSEFTWDAFQVDTNKDLADVLGNFVSRVTKFCRSKFSEAV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G + +++  +++     L   +  M    + +A A++ ++ +  + Y  A  PW + 
Sbjct: 420 PAGGEYGDAENKLIADLQTRLTTYQAAMDAIEVRKAAAELRAMWAAGNEYLQAAAPWSVF 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           K +PD+A+  + + + +IR  A+L   F+P  +  +   +   D
Sbjct: 480 KEDPDKAAAQIRLALNLIRIYAVLSAPFIPTASATLLSAMNTMD 523


>gi|29830946|ref|NP_825580.1| methionyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|68566000|sp|Q82F60|SYM_STRAW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29608059|dbj|BAC72115.1| putative methionyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 574

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 228/535 (42%), Gaps = 58/535 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+  G+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D  ++++D F R++ +++ +  +   +++++ G I +      
Sbjct: 66  PVDEFCAQAHDAQKAVYDGFELAFDYFGRSSSEQNREITQHFARRLNENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161
           YS  D  +  D  V        Y  A G Q  N           NP         ++  E
Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S  Q ++  +   H    P+    I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQHEVEEWVARHEEEWPQLASSIARK-----WLNEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------- 259
           + +P D  P+      + YVW DA   Y+  T    +  P+    K W  D         
Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDLDPENRDWKSWWYDADSGENPVR 299

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEV 316
               + KD + FH + +PA  L    P  K  +   F  + + G K S S    +     
Sbjct: 300 YTEFMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDHA 359

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   
Sbjct: 360 LEILPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKKRFGEE 419

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P      ES+  +    + +L E   +M+     +A A + +L S  + Y + + PW  
Sbjct: 420 VPAGAPAGESETKLGEEIAALLAEYESHMETLQFRKAAAALRALWSAGNSYLEEKAPWLE 479

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            KTNP+ A+  L   + +I   +++ + F+P  +  +     ++++   + + D+
Sbjct: 480 IKTNPEGAALTLRTAMNLIHLYSVVSEPFIPASSKAMRSAFALSEDTATWVTQDE 534


>gi|321469650|gb|EFX80629.1| hypothetical protein DAPPUDRAFT_318233 [Daphnia pulex]
          Length = 773

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 244/550 (44%), Gaps = 58/550 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 56  ILITSALPYVNNFPHLGNIIGCVLSADVFARYCRLRNYNTLYICGTDEYGTATETKALEE 115

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+  +   ++    DIS+D F RTT        + ++ K+     + +    
Sbjct: 116 GLTPQQICDKYFKLHDEVYKWFDISFDHFGRTTTPNQTKIAQDIFLKLHRNNYLVEDTME 175

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-------QYYNA-----------QHNPVQW 159
                  + +  D  V        Y+ A G       +  NA           +H PV  
Sbjct: 176 QLLCQHCKIFLADRFVEGTCPLCGYEDARGDQCDKCGKLVNAVELKLPRCKMCRHTPV-I 234

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWG 217
              +  F  L   +DKL S+ ES             VI  S++K GLK   ++R    WG
Sbjct: 235 KTSKHLFLDLPKIEDKLTSWMES---VTAGWTHNARVIANSWIKEGLKPRCITRD-LKWG 290

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVI-----GKDILR 269
             +P +     + YVW DA   YL+ T  Y +  +    ++W     V+      KD + 
Sbjct: 291 TPVPLEGYTDKVFYVWFDAPIGYLSITACYTEKWE----RWWKNREQVVHYEFMAKDNVP 346

Query: 270 FHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325
           FH++ +P+  L  + P  L   + +  ++ ++  K SKS G  +      +E G+  D  
Sbjct: 347 FHSVVFPSSQLGTHDPYTLVNHLIATEYLNYEDGKFSKSRGVGVFGNNA-QETGIPADVW 405

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +    L  + N +L N +GN  +R++S + K+YD  +P+     +
Sbjct: 406 RFYLLYVRPESQDSTFSWADLMTKNNTELLNNLGNFANRALSFLEKNYDSCVPS-MTLGQ 464

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            +  +L   +R L++    ++N  +  A+  + S+    ++   A +PW L K+  D   
Sbjct: 465 EENMLLVRINRELKQYISLLENAKLRDAIRPIFSISRLGNQLMQAAQPWVLIKSTKDEEK 524

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLKPGFMLH 500
            RA TV+ +   +I QL+++L  ++P L+ K+ + L V +D N        RL  G  + 
Sbjct: 525 KRAGTVIGLCANIICQLSVMLLPYMPNLSGKLQEQLGVTSDVNHLIPEFTCRLPAGHRIG 584

Query: 501 KTFDPIFPRF 510
           K   P+F + 
Sbjct: 585 KP-APLFQKI 593


>gi|83955735|ref|ZP_00964315.1| methionyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83840029|gb|EAP79205.1| methionyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 570

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 219/517 (42%), Gaps = 47/517 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGQEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +A+   +S+D F R++  ++    +     + D+G I +      
Sbjct: 66  PVAEYCAEMHEVQARIAEGFGLSFDHFGRSSSAQNKALTQHFAAALYDQGLIEEVEQRQI 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161
           YS  D  +  D            E  +G        Q +P               ++   
Sbjct: 126 YSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLEMRA 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +  F R S  +DKL  +  S  ++ +      +       GL+D  ++R   DWG+ + 
Sbjct: 186 TKHLFLRQSQMKDKLDEWINSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGVPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LHVIG 264
                 P     + YVW DA   Y+     ++D   GS  + W      AD       +G
Sbjct: 245 RGDADWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA ++ +  P  L   + S  ++ + G + S S G  +   + +E +  
Sbjct: 305 KDNVPFHTLSFPATIMGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEILPA 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P  G 
Sbjct: 365 DYWRWWLLSHAPETSDAEFTWENFQSSVNKDLADVLGNFISRITKFCRSKFSEDVPAAGE 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           +   + ++++  +  +   +  M+   + ++ A++ ++ +  + Y  AQ PW   KT+PD
Sbjct: 425 YGPEEHALIADLTERVARYQNAMEAMEVRKSAAELRAIWAAGNEYLQAQAPWTTFKTDPD 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +A+  + + + +I   A+L   F+P  A  + D + V
Sbjct: 485 KAAAQVRLALNLIPLYAVLSAPFIPTAAASMLDSMKV 521


>gi|149435709|ref|XP_001520505.1| PREDICTED: similar to MARS2 protein, partial [Ornithorhynchus
           anatinus]
          Length = 136

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 7/143 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
           P DP   +YVW+DAL +YLT TGY   P    A       HV+GKDILRFHA+YWPA LL
Sbjct: 1   PGDPTQTVYVWLDALVSYLTVTGY---PGPGAAD----TCHVLGKDILRFHAVYWPALLL 53

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +A LP P+++  H      G K+SKSLGN +DP   +E   VD  RYFL+R    G+DG 
Sbjct: 54  AAGLPPPRRIRVHSHWTVGGRKMSKSLGNAVDPGACLERFTVDGFRYFLLRRGVPGRDGD 113

Query: 341 YDKDGLKKRVNADLANGIGNLVS 363
           +  +  +  VNA+LA+ +G L++
Sbjct: 114 FSPEKAEGLVNAELADALGGLLN 136


>gi|254461141|ref|ZP_05074557.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677730|gb|EDZ42217.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 572

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 115/521 (22%), Positives = 223/521 (42%), Gaps = 49/521 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ ARF R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARFQRARGHEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      ++A    +S+D F R++ +++ D  +    +++D+G I +      
Sbjct: 66  PVDEYCAEMWDVQGEIAKGFRMSFDHFGRSSSQQNRDLTQHFAGRLADEGLIEEVTEQQI 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV---------------QWME 161
           YS  DE +  D            E  +G        Q +PV               +  E
Sbjct: 126 YSNTDERFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPYSTISGSTDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +  + R S  +D+L  + +S  ++ +      +       GL+D  ++R    WG+ + 
Sbjct: 186 TKHLYLRQSQMKDQLSDWIDSKDDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGVPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTGYLDNPDG-SKA---KFWPADL--------HV 262
                 P     + YVW DA   Y+       + +G S A   ++W  D+          
Sbjct: 245 RGTEDWPGMEGKVFYVWFDAPIEYIACAKEWADANGLSDADWQRWWRTDMGAEDVRYTQF 304

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +P  +L +  P     +  G  ++ + G + S S G  +   + +  +
Sbjct: 305 MGKDNIPFHTLSFPVTILGSGEPWKLVDYIKGLNYLNYDGGQFSTSRGRGVFMDQALAIL 364

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+  +    D  +  +  +  VN DLA+ +GN VSR        +  ++P  
Sbjct: 365 PSDYWRWWLLSHVPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEVVPEG 424

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G +   +E++++  +  ++    +M    + ++ +++ ++    + Y  A  PW   K +
Sbjct: 425 GTWGAQEEALIAELTTRVRAYEGHMDAMEVRKSASELRAIWVAGNEYLQAAAPWVTFKED 484

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           P++A+  + + + +IR  A+L   F+P  A  +   +   D
Sbjct: 485 PEQAAAQIRLALNLIRLYAVLSAPFIPDAAEDLMKAMHTDD 525


>gi|318059205|ref|ZP_07977928.1| methionyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318081093|ref|ZP_07988425.1| methionyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 570

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 224/513 (43%), Gaps = 54/513 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AA   GV
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAAQGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F        + + D   +++D F R++  ++ +  +   +K+++ G I +      
Sbjct: 66  PVAEFCATAHDAQKAVYDGFSLAFDYFGRSSSAQNREITQHFARKLNENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161
           YS  D  +  D  V        Y  A G Q  N           NP         ++  E
Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S  Q ++  + +    S P+    I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQGEVEKWIDATADSWPQLSSSIARK-----WLTEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGSKAKFW--PAD----LHV 262
           + +P D  P+      + YVW DA   Y+  T       P+G   K W   AD       
Sbjct: 240 VPVPADVWPELAAEGKVFYVWFDAPIEYIGATREWAETAPEGRDWKSWWYEADDVRYTEF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH++ +PA  +    P  +  F  S  ++ + G K S S    +   + +E +
Sbjct: 300 MGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQRRGVFTHDALELL 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYF++       D  +  +  +  VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 360 PADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPEG 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   KT+
Sbjct: 420 GTAGEAETRLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + A+  L   + +I   A++ + FVP  A  +
Sbjct: 480 QEAAALTLRTAMNLIHLYAVVSEPFVPTTAKAM 512


>gi|302520598|ref|ZP_07272940.1| methionyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302429493|gb|EFL01309.1| methionyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 570

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 224/513 (43%), Gaps = 54/513 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AA   GV
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAAQGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F        + + D   +++D F R++  ++ +  +   +K+++ G I +      
Sbjct: 66  PVAEFCATAHDAQKAVYDGFSLAFDYFGRSSSAQNREITQHFARKLNENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161
           YS  D  +  D  V        Y  A G Q  N           NP         ++  E
Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S  Q ++  + +    S P+    I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQGEVEKWIDATADSWPQLSSSIARK-----WLTEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGSKAKFW--PAD----LHV 262
           + +P D  P+      + YVW DA   Y+  T       P+G   K W   AD       
Sbjct: 240 VPVPADVWPELAAEGKVFYVWFDAPIEYIGATREWAETAPEGRDWKSWWYEADDVRYTEF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH++ +PA  +    P  +  F  S  ++ + G K S S    +   + +E +
Sbjct: 300 MGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQRRGVFTHDALELL 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYF++       D  +  +  +  VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 360 PADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPEG 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   KT+
Sbjct: 420 GTAGEAETRLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + A+  L   + +I   A++ + FVP  A  +
Sbjct: 480 QEAAALTLRTAMNLIHLYAVVSEPFVPTTAKAM 512


>gi|198434929|ref|XP_002128793.1| PREDICTED: similar to methionyl-tRNA synthetase [Ciona
           intestinalis]
          Length = 883

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 244/552 (44%), Gaps = 51/552 (9%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE EK + I++A+ Y N  PH+G+    ++ ADV +R+ RL G +VL+  GTDE+G    
Sbjct: 250 KEGEKNILITSALPYVNNVPHLGNIIGCVLSADVFSRYCRLRGWNVLYICGTDEYGTATE 309

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT K   D+  +   ++ +   I +D F RTT +      + ++  +     +
Sbjct: 310 TKAAQEGVTPKEICDKYHKIHSEVYEWFSIGFDYFGRTTTECQTKIAQDIFWHLHRNNHL 369

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------- 161
            K      Y  R E +  D  V        ++ A G   +     +  +E          
Sbjct: 370 IKQTVEQLYCGRCERFLADRFVEGTCPLCAFEDARGDQCDKCGKLINAVELKSPKCKMCS 429

Query: 162 -------EEGYFFRLSAYQDKLL-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                   E  F  LS  + KL     ES          +    ++++ GLK   ++R  
Sbjct: 430 DTPAIRTSEHLFVDLSKLEPKLRRCLQESFKGEGWSNNAKTITETWLRDGLKPRCITRD- 488

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264
             WG  +P +     + YVW DA   YL+ T  Y D     K + W   P ++ +   + 
Sbjct: 489 LKWGTPVPLEGFTDKVFYVWFDAPIGYLSITANYTD-----KWELWWKNPKNVQLYNFMA 543

Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH++ +P+ LL  +    +   + +  ++ ++  K SKS G  V         + 
Sbjct: 544 KDNVPFHSVVFPSCLLGTDDEYTIVNHLNATEYLNYEEGKFSKSRGVGVFGDHASKTNID 603

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L+     G+D  +       + N++L N +GN ++RS+  +   Y G++P P 
Sbjct: 604 SDIWRFYLLSMRPEGQDTHFSWSDFLLKNNSELLNNLGNFINRSLKFVSNAYGGVVPDP- 662

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +D  +L++ +R L++   +M    I   L +++S+    ++Y    +PW+L K + 
Sbjct: 663 VLNNTDLELLALVNRELKDYVTDMDKLKIRDNLRRILSISRLGNQYLQENQPWKLIKGSN 722

Query: 442 D---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           D   RASTV  +   +   L IL+  ++P+ ++ I D L +        ++ + L  G  
Sbjct: 723 DDKSRASTVTSIAANLSCLLCILIHPYMPQTSSIIQDQLNLRGGYLIPDAITRMLPSGHK 782

Query: 499 LHKTFDPIFPRF 510
           ++K   P+F + 
Sbjct: 783 INKP-SPLFRKL 793


>gi|196013568|ref|XP_002116645.1| hypothetical protein TRIADDRAFT_31114 [Trichoplax adhaerens]
 gi|190580921|gb|EDV21001.1| hypothetical protein TRIADDRAFT_31114 [Trichoplax adhaerens]
          Length = 761

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 243/549 (44%), Gaps = 59/549 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + +++A+ Y N  PH+G+    ++ AD  AR+ R    ++L+  GTDE+G      A
Sbjct: 125 KRNILLTSALPYVNNVPHLGNIVGCVLSADAFARYCRARNYNILYICGTDEYGTATETKA 184

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +   D+      ++    DIS+D F RTT K   +  + ++ ++ D+  + + 
Sbjct: 185 VEEGVTPQQICDKYHALHAEVYKWFDISFDHFGRTTTKEQTEIAQDIFWRLQDRNYVTEE 244

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD---------------GQYYNA-----------QHNP 156
                +    + +  D  V                    G+  NA           +  P
Sbjct: 245 NVDQLFCENCQRFLADRFVEGTCPFCTFPDARGDQCDKCGKLINAIELKAPRCKVCKSQP 304

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL--PIERRNEVISFVKSGLKDLSLSRKTF 214
           V     +  F  L   + +L  YY   P+ +       RN   ++++ G+K   ++R   
Sbjct: 305 VI-KSSKHLFLDLPKIEPQLHKYY-GRPDSLTDWSPAARNITQTWLRDGVKSRCITRD-L 361

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKD 266
            WG  +P +   + + YVW DA   Y++ T  Y D  +    K+W  P ++ +   + KD
Sbjct: 362 KWGTPVPLEGFTEKVFYVWYDAPIGYISITAAYTDQWE----KWWKNPQNVEMYNFMAKD 417

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH+I +PA LL+A  N  +  K+ +  ++ ++  K SKS G  V         + VD
Sbjct: 418 NVPFHSIIFPACLLAADDNYTVVNKLSATEYLNYEDGKFSKSRGIGVFGNDAKATGIPVD 477

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L+      +D  +    L+ + N++L   +GN V+R++  +   ++G IP     
Sbjct: 478 IWRFYLLYVRPETQDSSFSWSDLEAKNNSELLANLGNFVNRAMLFVSNFFNGEIPEMD-L 536

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TN 440
            E D+ +L+  +R ++    N++   I   +  ++S+    ++Y  +  PW+L K    +
Sbjct: 537 IEEDKVLLAQITREIRTYNNNLERTRIRDGIRNILSVSRLGNQYMQSHTPWKLVKQSEAD 596

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-------DILFVADENRCFQSLDQRL 493
             RA TV+ V   +   L+ILLQ ++P  + +I        D   + D+  C      R+
Sbjct: 597 KKRAGTVVGVCANITCLLSILLQPYMPTTSKEILSQAKLVDDYSVITDKFVCLLPAGHRI 656

Query: 494 -KPGFMLHK 501
            KP  +  K
Sbjct: 657 GKPKHLFEK 665


>gi|30248639|ref|NP_840709.1| methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|68566001|sp|Q82WP0|SYM_NITEU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30180234|emb|CAD84536.1| Methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 706

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 229/547 (41%), Gaps = 61/547 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  +   A+  G
Sbjct: 6   ILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVYYVCADDTHGTPVMLRAEKEG 65

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI----LWKKISDKGDIYK 121
           ++ +  + + ++ + RD      I++D +  T    H D  R     +++K+ + G I  
Sbjct: 66  ISPEALIARVHAEHLRDFTG-FHIAFDQYYST----HSDETRYYAEDIYRKLKEAGLIAV 120

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161
                 Y      +  D  V       GA  QY        A + P +            
Sbjct: 121 RAIEQLYDPIKNLFLPDRFVKGECPKCGAAEQYGDSCEACGAAYTPTELKNPYSAVSGAT 180

Query: 162 -----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRK 212
                 E +FF+LS  +        +H    L  E  N++  ++    ++ L D  +SR 
Sbjct: 181 PVRKTSEHFFFKLSDSRCADFLRRWTHEGNHLQAEAANKMAEWLGEAGENKLSDWDISRD 240

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD-----LHVIGKD 266
              +G +IP +     YVW+DA   Y+ +   L    G     +W  D      H IGKD
Sbjct: 241 APYFGFEIPGETGKYFYVWLDAPIGYMGSFKKLCARKGIDFDAYWKKDSTTELYHFIGKD 300

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FHA++WPA L +A    P ++F+HGF+   GEK+SKS G  I     +E+ +  + L
Sbjct: 301 ILYFHALFWPAMLENAGYRTPTQIFAHGFLTVNGEKMSKSRGTFITAESYLEQGLNPEWL 360

Query: 326 RYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF- 383
           RY+   ++    +D   + D    RVN+DL     N+ SR    I K + G + +   + 
Sbjct: 361 RYYYAAKLNGSMEDIDLNLDDFVARVNSDLVGKYINIASRCAGFISKRFGGKLVSGEDYR 420

Query: 384 ---TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438
                 DE        V++   E         A+  ++    EV+       PWE+ +  
Sbjct: 421 LLQQMVDEHFAGWQPGVIEAAYEARD---FSAAVRHIMRRADEVNELIHELAPWEIARDE 477

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSL-DQRL 493
           T          + +++   L+  L+  +P+ A +I D L + +    + +  Q L D  L
Sbjct: 478 TRERELHRACSLGIQMFYLLSCYLKPILPRTAAQIEDFLNLGELSWQKQQAGQPLSDTLL 537

Query: 494 KPGFMLH 500
            PG +++
Sbjct: 538 PPGHVIN 544


>gi|328717976|ref|XP_003246352.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 736

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 239/524 (45%), Gaps = 67/524 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K+ + + +++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+ +GTDE+G    
Sbjct: 40  VKDEKNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGWNTLYISGTDEYGTATE 99

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    +T +   D+  +   ++    +IS+D F RTT ++  +  + ++K++   G  
Sbjct: 100 TKALEEKLTPQQICDKFFKIHNEIYKWFNISFDHFGRTTSQKQTEIVQEIFKEVHSNG-- 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------------YKGADGQYYN-------------- 151
               Y+   S+      N D                Y+ A G   +              
Sbjct: 158 ----YTSTASMEQLLCENCDRFLADRFVEGTCPLCNYEDARGDQCDGCGHLINATELIKP 213

Query: 152 ----AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLK 205
                Q  PV    ++  F  L   + KL  + +   +         +VI  S++K GLK
Sbjct: 214 RCKVCQKTPVIRSSQQ-LFLNLPKVEAKLNDWVDKSGD---DWSYNAKVITKSWLKDGLK 269

Query: 206 DLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD--- 259
           +  ++R    WGI +P  D    + YVW DA   Y++ +     PD  K  +W P D   
Sbjct: 270 ERCITRD-LKWGIPVPLEDFKSKVFYVWFDAPIGYMSMSAAY-TPDWRK--WWQPEDDTK 325

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 + KD + FH++ +PA L +   N  +   + +  ++ ++  K SKS G  +   
Sbjct: 326 VTYYQFMAKDNVPFHSVMFPACLFATERNYTMVNHIMATEYLNYEDGKFSKSRGVGVFGN 385

Query: 315 EVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           +  ++ G+  D  R++L+      +D  +    L  + N++L N +GN  +R++S + K 
Sbjct: 386 DA-QDTGLPADVFRFYLLFVRPESQDSSFSWADLATKNNSELLNNLGNFCNRALSFLEKF 444

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +D +IP        + ++L++ +R L+E    +    +   L  ++S+    ++Y   QK
Sbjct: 445 FDCVIPEI-QLGNDELTLLALVTRDLKEYTSMLDKAKLRDGLRLILSISRHGNQYMQFQK 503

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           PW L K + +   RA TV+ ++  +   LA++LQ ++P+  N I
Sbjct: 504 PWVLIKGSSEEKIRAGTVIGLSCNLACLLAVMLQPYMPQTVNII 547


>gi|163747185|ref|ZP_02154540.1| methionyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379460|gb|EDQ03874.1| methionyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 570

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 222/519 (42%), Gaps = 47/519 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRGQEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + +  +       +A+   +S++ F R++  ++    +     ++D+G I +      
Sbjct: 66  PVEDYCAEMYAVQARIAEGFGLSFNHFGRSSSVQNRKLTQHFAGALADQGLIEEVSQRQI 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161
           YS  D  +  D            E  +G        Q +P               ++  E
Sbjct: 126 YSPTDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTISGATDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +  F R S  +D+L  +  S  ++ +      +       GL+D  ++R    WG+ + 
Sbjct: 186 TKHLFLRQSKLKDELDDWINSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGVPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LHVIG 264
                 P     + YVW DA   Y+     ++D   GS  + W      AD       +G
Sbjct: 245 RGDQDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA +  +  P  L   + S  ++ + G + S S G  +   + +E +  
Sbjct: 305 KDNVPFHTLSFPATIKGSGEPWKLVDYIKSFNYLTYDGGQFSTSRGRGVFMDQALEILPA 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P  G 
Sbjct: 365 DYWRWWLLSHAPETSDAEFTWENFQASVNKDLADVLGNFISRITKFCRSKFGEAVPEAGE 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           + E++++++   +  +      M+   + ++ A++  + +  + Y  AQ PW   KT+PD
Sbjct: 425 YGEAEQALIEDITARVARYETLMEAMEVRKSAAELRGIWAAGNEYLQAQAPWTTFKTDPD 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +A+  + + + +I   A+L   F+P  A  + + + VAD
Sbjct: 485 KAAAQVRLALNLIPLYAVLSAPFIPSAAASMLEAMKVAD 523


>gi|329851532|ref|ZP_08266289.1| methionyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840378|gb|EGF89950.1| methionyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 571

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 219/516 (42%), Gaps = 52/516 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G +VL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFMRARGHEVLYICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+     +   +   +SYD F R++  ++    ++  + +   G I +   
Sbjct: 63  AGQDVRTYCDEQHLIQKSAGESFGLSYDWFGRSSSPQNRQLTQMFCEALDRNGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQ 158
              +S+ D  +  D  V        Y+ A G Q  N           NP         ++
Sbjct: 123 KMVFSIDDGRFLPDRYVEGTCPHCGYEKARGDQCDNCGRLLDPTDLKNPYSAVSGSTNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +  +D+L ++  SH  +  P   ++     +  GL D  ++R    WG+
Sbjct: 183 VRDTRHLYLLQTKVEDRLRAWIASHDNW--PHLAKSIANKHLDEGLIDRGITRD-LAWGV 239

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTT-GYLD---NPDGSKAKFWPAD-------- 259
            +  D Q        + YVW DA   Y+  T  + D    PDG +  +W  D        
Sbjct: 240 PVTKDGQPRPGFENKVFYVWFDAPIEYIAATREFFDAKGKPDGWQT-WWRLDQGAEDVSY 298

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA +L +  P  +   + +  ++   G K S S+   +   + +
Sbjct: 299 VEFMGKDNVAFHTVSFPATILGSGEPWKMVDTLKAFNWLNWYGGKFSTSMNRGVFMDQAL 358

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  +N DL + +GN V+R          G +
Sbjct: 359 ELLPADYWRWYLIANSPESSDSSFTWEQFQATINKDLNDVLGNFVNRITKFTEGKLGGGV 418

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G     +E +    +  L E  E ++   + +A   V  +    + Y     PW   
Sbjct: 419 PEGGEAGPIEEKLYGDVAEQLAEATEALETMEMRKAAQAVRRIWVLGNEYLQEAAPWTAI 478

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+P RA  ++   + ++R  A+L Q F+P  A KI
Sbjct: 479 KTDPARAGVIVRHALNLVRLNAVLAQPFMPFSAEKI 514


>gi|82703057|ref|YP_412623.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123727136|sp|Q2Y7P0|SYM_NITMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|82411122|gb|ABB75231.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 728

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 216/532 (40%), Gaps = 70/532 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF ++   +V +    D HG  I   A+
Sbjct: 3   KRKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQEHEVHYVCADDAHGTPIMLRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  +D+     +   D   I +D +  T    +   C  +++++     I K  
Sbjct: 63  QEGITPRQLIDRVWHEHKTDFDGFHIGFDHYYTTDSPENQAFCEDIYRQLRAGELIAKRS 122

Query: 124 YSGWYSLRDEAYYND----DEVYKGADGQYYN-------AQHNPVQWME----------- 161
              +Y    + +  D     E  +   G  Y        A + P   +            
Sbjct: 123 VEQFYDPVKQMFLPDRYIKGECPRCHAGDQYGDSCEACGATYLPTDLISPYSAVSGARPE 182

Query: 162 ---EEGYFFRLSA------YQDKLLSYYESHPEFILPIERR------NEVISFVKSGLKD 206
                 YFF+LS        ++ +     + P   L    R      N++  ++ +GL D
Sbjct: 183 RRTSNHYFFKLSDVRCEAFLKNWIFESIPAQPGVALETRPRLQPEAANKMNEWLSAGLVD 242

Query: 207 LSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAK----FWPAD- 259
             +SR    +G  IP    +   YVW+DA   Y  +   Y      ++A+      P   
Sbjct: 243 WDISRDAPYFGFPIPRTGGKKFFYVWLDAPVGYFGSFKNYFKQNQRTQAEIDEFLRPGGN 302

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
              +H IGKDIL FHA++WPA L  +    P ++++HGF+   G+K+SKS G  I     
Sbjct: 303 TEMVHFIGKDILYFHALFWPAMLEFSGYRTPTQIYAHGFLTVNGQKMSKSRGTFITAESY 362

Query: 317 IEE-VGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILK 371
           +++ +  + LRY+   ++    D   D D        RVN+DL     N+ SR    I K
Sbjct: 363 LKQGLNPEWLRYYYAAKL---NDSMEDIDLSFEDFVARVNSDLVGKYVNIASRCAGFITK 419

Query: 372 DYDGMIPTPGA-----------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + G +    +           F E  E    +   +   I    + +   +A+ +++S 
Sbjct: 420 KFGGELTHNVSEASRKWFNQFLFCELGEGDTFLGRHM--SIANFYERREYSKAIKEIMSA 477

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               ++Y D  KPW L K   N      V  V + + R L + L+  +PKLA
Sbjct: 478 ADVANQYVDRMKPWVLAKDSRNDRELHEVCSVALNMFRMLTVYLKPVLPKLA 529


>gi|307329475|ref|ZP_07608636.1| methionyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306884884|gb|EFN15909.1| methionyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 577

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 220/509 (43%), Gaps = 45/509 (8%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ AG+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYMRQRGHDVLYICATDEHGTPAELAAKEAGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D   +++D F R++  ++    + + +++   G I +      
Sbjct: 66  PVDEFCAQQHEAQKAIYDGFGLAFDYFGRSSSAQNVQITQTIARELKANGFIEERSIRQV 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181
           YS  D  +  D  +     + G D    +   N  + ++        SA      L   E
Sbjct: 126 YSNADGRFLPDRYIEGTCPHCGYDKARGDQCENCTRVLDPTDLIDARSAISGSSDLEVRE 185

Query: 182 SHPEFILPIERRNEVISFV-------------------KSGLKDLSLSRKTFDWGIKIPD 222
           +   F+L  +   EV S+V                     GL+D +++R   DWG+ +P 
Sbjct: 186 TKHLFLLQSKLAEEVASWVDERGKDWPTLASSIARKWLNEGLQDRAITRD-LDWGVPVPA 244

Query: 223 D--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGSKAKFWPADL-------HVIGKD 266
           D  P+      + YVW DA   Y+  T  + D +P+    K W  D+         + KD
Sbjct: 245 DTWPELAAEGKVFYVWFDAPIEYIGATKEWADLDPENRDWKSWWYDVDETVRYTEFMAKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            + FH + +PA LL       K  +   F  + + G K S S    +     +E +  D 
Sbjct: 305 NVPFHTVMFPATLLGTRDAWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDAALEVLPADY 364

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P   A  
Sbjct: 365 WRYFLMANAPESDDTSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGQAAG 424

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E++E +    +R+L E  E+M      +A A + +L S  + Y + + PW   KT+ + A
Sbjct: 425 EAEERLGEEIARLLAEYEEHMDALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDQEAA 484

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +  L   + +I   AI+ + F+P  A  +
Sbjct: 485 ALTLRTAMNLIHLYAIVSEPFIPSSARAM 513


>gi|163743016|ref|ZP_02150399.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383699|gb|EDQ08085.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 575

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/531 (21%), Positives = 224/531 (42%), Gaps = 49/531 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG    
Sbjct: 1   MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +       +A    +S+D F R++  ++H   +    K++++G I
Sbjct: 61  LAAAKAGKPVADYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEQGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +      +S  D  +  D            E  +G   +    Q +P   +        
Sbjct: 121 REVTEKQVFSHADGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLIDPRSAISG 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E +  +   S  +D+L  +  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDDWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD--- 259
            DWG+ +       P     + YVW DA   Y+  +    + +G       ++W  D   
Sbjct: 240 LDWGVPVKKGDADWPGMEGKVFYVWFDAPIEYIAASREWADANGKTDADWQRWWRTDKGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P  +   + S  ++ + G + S S G  + 
Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           Y   +P    + E++++++   S  +     +M    + ++  ++ ++    + Y  +  
Sbjct: 420 YGEAVPAGNDYGEAEQALIDEISTRVTAYEGHMAAMDVRKSAQELRAIWVAGNEYLQSVA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           PW + KT+PD+A+  + + + +IR  A+L   F+P    ++   L   D +
Sbjct: 480 PWSVFKTDPDQAAAQVRLGLNLIRLYAVLSAPFIPDATERLLAALQTEDRS 530


>gi|254449433|ref|ZP_05062870.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198263839|gb|EDY88109.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 570

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/520 (22%), Positives = 221/520 (42%), Gaps = 57/520 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  A  
Sbjct: 6   ITSAIPYINGIKHLGNLIGSQLPADLYARYLRGRGHEVLFLCATDEHGTPAELAATKADK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      D+A    +S+D + R++  ++    +     ++DKG I +   +  
Sbjct: 66  PVAEYCAEMWTVQSDLAARFGLSFDHYGRSSSPQNRALTQHFAGVLADKGLIEERMETQM 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YS  D  Y  D            E  +G        Q +PV  +     +  +S   D  
Sbjct: 126 YSHEDGRYLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINP---YSTISGSTD-- 180

Query: 177 LSYYESHPEFILPIERRNEVISFVKS--------------------GLKDLSLSRKTFDW 216
           L   ++   ++L  + +N++ +++ S                    GL+D  ++R   DW
Sbjct: 181 LEMRDTKHLYLLQSKLKNDIEAWIDSQTGWPVLTTSIAKKWLHDGDGLQDRGITRD-LDW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-------- 259
           G+ +       P     + YVW DA   Y+       +  G +  A++W  D        
Sbjct: 240 GVPVMRGDAPWPGMEDKVFYVWFDAPIEYIACAQEWADATGGQDWARWWRTDKGADDVRY 299

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA ++ ++ P  +  +  S  F+ + G + S S G  +   + +
Sbjct: 300 TQFMGKDNVPFHTLSFPATIIGSDEPWKRVDYLKSFNFLNYDGGQFSTSRGRGVFMDQAL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +   N DLA+ +GN VSR        +   +
Sbjct: 360 EILPADYWRWWLLSHAPETSDAEFTWEAFQTDTNKDLADVLGNFVSRVTKFCRSKFSEDV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G + +++  +++     L   +  M    + +A A+V ++ +  + Y  A  PW + 
Sbjct: 420 PAGGEYGDAENKLIADLQIRLTAYQAAMDAIEVRKAAAEVRAMWAAGNEYLQAAAPWSVF 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K +PD+A+  + + + +IR  A+L   F+P  +  +   +
Sbjct: 480 KVDPDQAAAQIRLALNLIRIYAVLSAPFIPTASATLLSAM 519


>gi|85705165|ref|ZP_01036265.1| methionyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670487|gb|EAQ25348.1| methionyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 570

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 219/507 (43%), Gaps = 51/507 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLFARYCRARGHEVLFLCATDEHGTPAELAAAKAGQ 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      ++A    +S+D F R++  ++H   +   K++ D+G I +   +  
Sbjct: 66  PVAEYCAEMHTVQAEIARGFRLSFDHFGRSSSSQNHRLTQHFAKRLHDQGLIREVSETQM 125

Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEG------------ 164
           YS  D  Y  D  +        Y  A G   +    Q +PV  +                
Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGYDSARGDQCDNCTKQLDPVDLINPRSVISGATDLEMRV 185

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219
               +   S  +D+L  + +S   +  P+   +    ++  G  L+D  ++R   DWGI 
Sbjct: 186 TKHLYLCQSQMKDELEKWIDSKTGW--PVLTTSIAKKWLNDGDGLQDRGITRD-LDWGIP 242

Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHV 262
           +       P     + YVW DA   Y+     ++D   G+   ++W  D           
Sbjct: 243 VKRGDEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGTDWERWWRTDKGAEDVRYTQF 302

Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +E +
Sbjct: 303 MGKDNVPFHTLSFPATILGSREPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEIL 362

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P+ 
Sbjct: 363 PADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGETVPSG 422

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
             +   + ++++  +  +++   +M+   + ++ A + ++  E + Y     PW   K +
Sbjct: 423 ATYGAQETALIARLTSRIRDYEGHMEAMEVRKSAAALRAIWVEGNEYLQEVAPWSTFKQD 482

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVP 467
           P+RA+    + + +IR  A+L   F+P
Sbjct: 483 PERAAMQTRLALNLIRLYAVLSSPFIP 509


>gi|302775650|ref|XP_002971242.1| hypothetical protein SELMODRAFT_171855 [Selaginella moellendorffii]
 gi|300161224|gb|EFJ27840.1| hypothetical protein SELMODRAFT_171855 [Selaginella moellendorffii]
          Length = 784

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 225/521 (43%), Gaps = 62/521 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G ++++  GTDE+G      A
Sbjct: 9   RRNILVTSALPYVNNVPHLGNIIGSVLSADVFARYGRLRGYNIIYMCGTDEYGTATETKA 68

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+     + + D  DI +D F RT+       C+ ++KK+  +  +Y+ 
Sbjct: 69  LEEKTSPKEICDKYHDVHKKVYDWFDIRFDKFGRTSSPEQTVICQSIFKKLLAQDRLYED 128

Query: 123 ---------CYSGWYSLRDEAYYND----DEVYKGADGQYYNAQHNPVQWMEEEG----- 164
                    C S    L D              +G   +      NP + +E +      
Sbjct: 129 KINQACRLYCESCQRFLADRFVIGTCPKCGMTARGDQCEKCTHVLNPGELVEPKCKICNS 188

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRK 212
                     F  L   +++L+ Y E     I      N +    ++++ GLK   ++R 
Sbjct: 189 SPHLRETTHLFLDLPKIKNELVDYVEKTS--IAGGWSSNSITITNAWIRDGLKGRCITRD 246

Query: 213 TFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGK 265
              WG+ +P  P++   + YVW DA   Y++ T    N      K+W ++       +GK
Sbjct: 247 -LKWGVPVPL-PRFEDKVFYVWFDAPIGYISITA---NYTPEWEKWWKSEDVELFQFMGK 301

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH + +P  LL       + K + +  ++ ++G K SKS G  V         V V
Sbjct: 302 DNVTFHTVIFPCTLLGTGERWTMMKTLSATEYLNYEGAKFSKSAGIGVFGNDAQDTNVPV 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378
           +  RY+L+       D F+    L+ + N +L   +GN V R +S + K     Y   IP
Sbjct: 362 EVWRYYLLSIRPEAADTFFSWADLQAKQNNELLKNLGNFVHRCLSFLAKPEGQGYSSKIP 421

Query: 379 -TPGAFTESDESILSV-----CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
             PGA    +E  L+V      S +LQ+  ++M+   +   L   +S+ S  + Y    +
Sbjct: 422 DAPGA----EEHALTVKLAEEVSELLQQYVDSMEKTKLKNGLKVAMSISSLGNSYLQESE 477

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            W L K +    + V+   + +++ LA +L+ F+P  + K+
Sbjct: 478 FWRLYKEDRPSCNIVVRTAIGLVKILATILEPFMPSFSKKV 518


>gi|331247157|ref|XP_003336208.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309315198|gb|EFP91789.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 291

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 55/306 (17%)

Query: 204 LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           L DLS+SR T    WGI +P DP  I+                                 
Sbjct: 9   LADLSISRPTSRLSWGIPVPGDPNQII--------------------------------- 35

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
                   FHAIYWPA L++A +PLPK + +HG      EK+SKS+GNV+DP + ++E G
Sbjct: 36  --------FHAIYWPAILMAAGIPLPKHIIAHGHWKIDEEKMSKSIGNVVDPFKAMDEWG 87

Query: 322 VDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--------KD 372
           VD +RY+L+R       D  +  + L +    DL   +GNL++R  +  L        + 
Sbjct: 88  VDGVRYYLMRAPGSLWGDSDWAPNRLDEHYRKDLLGQLGNLLARISAPKLWNRLPPGRRS 147

Query: 373 YDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
              ++  PG+ TE +  +S+  +  ++  E+  +M++  I +AL  +  +++  +R    
Sbjct: 148 GASILFPPGSKTEIEGADSLQRLLLQLPGELDGHMKSFEIPKALKSIFDVLAGANRLIQD 207

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             PW  + T PD A   ++++ E +R   ILLQ F+P  A ++ D L VA + R +  L 
Sbjct: 208 TAPWH-ESTTPDDAYQAIHLSAEALRISGILLQPFIPAKAAQLLDSLGVAQDGRTWSHLA 266

Query: 491 QRLKPG 496
             L  G
Sbjct: 267 LGLGTG 272


>gi|302543872|ref|ZP_07296214.1| methionine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461490|gb|EFL24583.1| methionine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 584

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 221/503 (43%), Gaps = 45/503 (8%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ AG+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYMRQRGHDVLYICATDEHGTPAELAAKEAGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
              VF  Q     + + D   +++D F R++  ++ +  + + +++   G I +      
Sbjct: 66  PVDVFCAQQHDAQKAIYDGFGLAFDYFGRSSSAQNVEITQRIARELKGHGFIEERSIRQV 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181
           YS  D  +  D  +     + G D    +   N  + ++        SA      L   E
Sbjct: 126 YSNADGRFLPDRYIEGTCPHCGYDRARGDQCENCTRVLDPTDLIDARSAISGSSDLEIRE 185

Query: 182 SHPEFILPIERRNEVISFVK-------------------SGLKDLSLSRKTFDWGIKIPD 222
           +   F+L  +   EV ++V+                    GL+D +++R   DWG+ +P 
Sbjct: 186 TKHLFLLQSKLAEEVGTWVEENGKQWPTLASSIARKWLTEGLQDRAITRD-LDWGVPVPA 244

Query: 223 D--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGSKAKFWPADL-------HVIGKD 266
           D  P+      + YVW DA   Y+  T  + D +P+    K W  D+         + KD
Sbjct: 245 DTWPELAAEGKVFYVWFDAPIEYIGATKEWADRDPENRDWKSWWYDVDTTVRYTEFMAKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            + FH + +PA LL       K  F   F  + + G K S S    +     +E +  D 
Sbjct: 305 NVPFHTVMFPATLLGTRDVWKKVDFVKAFNWLTYYGGKFSTSQKRGVFTDAALEVLPADY 364

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P   A  
Sbjct: 365 WRYFLMANAPESDDTSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGKAAG 424

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E++E +    +R+L E  E+M      +A A + +L S  + Y + + PW   K++ + A
Sbjct: 425 EAEERLGEEIARLLAEYEEHMDTLQFRKAAAALRALWSAGNSYLEEKAPWLEIKSDQEAA 484

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
           +  L   + +I   AI+ + F+P
Sbjct: 485 ALTLRTAMNLIHLYAIVSEPFIP 507


>gi|84515258|ref|ZP_01002620.1| methionyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510541|gb|EAQ06996.1| methionyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 570

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 221/523 (42%), Gaps = 51/523 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRKRGHEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +AD   +S+D F R++  ++H   + +  ++++ G I +      
Sbjct: 66  PVAAYCAEMHAVQARIADGFGLSFDHFGRSSSPQNHKLTQAMAGRLAEMGLIREVTEDQV 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------------ 164
           YS+ D  +  D  +            +G        Q +P   +                
Sbjct: 126 YSVTDGRFLPDRYIEGTCPNCGFDSARGDQCDNCTKQLDPTDLINPRSTISGATDLEVRT 185

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219
               + R S  +  L  + +S  ++  PI   +    ++  G  L+D  ++R   DWGI 
Sbjct: 186 TKHLYLRQSELKAALADWIDSKKDW--PILTTSIAKKWLNDGDGLQDRGITRD-LDWGIP 242

Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHV 262
           +       P     + YVW DA   Y+     + D   G+   ++W  D           
Sbjct: 243 VRKGDQDWPGMEGKVFYVWFDAPIEYIACAQEWQDAGKGNDWERWWRTDKGAGDVRYTQF 302

Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +PA ++    P  L   + S  ++ + G + S S G  +   + ++ +
Sbjct: 303 MGKDNVPFHTLSFPATIMGTQQPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALDIL 362

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+       D  +  D  ++ VN DLA+ +GN VSR        +   IP  
Sbjct: 363 PSDYWRWWLLSHAPETSDAEFTWDAFQQDVNKDLADVLGNFVSRITKFCRSKFSETIPAG 422

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G     + ++++  ++ L   + +M    + +A A++ ++    + Y  A  PW   KT+
Sbjct: 423 GEHGAPEHALIAALTQRLTAYQGHMDAIEVRKAAAELRAIWVLGNEYLQANAPWTTIKTD 482

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           PD A+  + + + +IR  A+L   F+P  +  + + +   D +
Sbjct: 483 PDMAAMQVRLGLNLIRLYAVLSAPFIPDASKLLLEAMQTDDAD 525


>gi|66815711|ref|XP_641872.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74856380|sp|Q54X95|SYMC_DICDI RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|60469912|gb|EAL67895.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 736

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 225/517 (43%), Gaps = 53/517 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + ++  GTDE+G      A + 
Sbjct: 18  ILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYICGTDEYGTATETKALSE 77

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K   D+     +++ +  +IS+D F RT+     +  + ++ KI D G        
Sbjct: 78  GCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQDIFNKIKDNGYTLTQEIE 137

Query: 126 GWYSLRDEAYYNDDEVYKG---------ADGQYYNAQH---NPVQWM------------- 160
             Y  +    +  D   +G         A G   +      NP + +             
Sbjct: 138 QLYCEQTCKMFLADRFVEGTCPHCKFEDARGDQCDGCSKLLNPTELINPRCKVCSKPPVI 197

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGI 218
              +  F  L   Q ++  + E++ +     E    +  ++VK  LK   ++R    WG 
Sbjct: 198 KSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVKGELKPRCITRD-LKWGT 256

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GKDILRFH 271
            +P +     + YVW DA   Y++ T    N      K+W  P ++ ++   GKD + FH
Sbjct: 257 PVPMEEFKDKVFYVWFDAPIGYISITAEYTN---EWEKWWKNPENVKLVQFMGKDNVPFH 313

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVDA 324
            + +PA L+ +  N  L   + +  F+ ++  K SKS      G+      +  EV    
Sbjct: 314 TVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGAKATGIPSEV---- 369

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGA 382
            R++L+       D  +  D    + N +L N  GNLV+R + M+  +  ++G++P  G 
Sbjct: 370 WRFYLLNNRPESSDSIFSWDDFNFK-NNELLNNFGNLVNRVLKMLNTNAAFNGVVPKIGE 428

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E D+ ++      L +  + ++   +   L   +S+    + Y    KPW+L   + +
Sbjct: 429 LNEVDKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQDNKPWDLSGKDNE 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           R   VL + + +I+ L+ LL+ ++P L +K+   L V
Sbjct: 489 RCGQVLAILINLIKLLSTLLEPYIPSLTDKVHQQLNV 525


>gi|328849345|gb|EGF98527.1| hypothetical protein MELLADRAFT_50986 [Melampsora larici-populina
           98AG31]
          Length = 675

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 122/528 (23%), Positives = 235/528 (44%), Gaps = 58/528 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL--DVLFTTGTDEHGQK 57
           + +R  + I++A+ Y N  PH+G+     + ADV AR+ R   +   VL+  GTDE+G  
Sbjct: 16  LSDRPNILITSALPYVNNAPHLGNIIGSTLSADVYARYRRTGPIPSQVLYICGTDEYGTT 75

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
               A   G++     D+  +  +D  +  DIS+D F RTT  +  + C+ ++  + +  
Sbjct: 76  TETKALEEGLSPGALCDKYHQVHKDSYEWFDISFDHFGRTTTPKQTEICQEIFTALYNND 135

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------ 151
            + +      Y   D+ +  D  V          GA G   +                  
Sbjct: 136 HLVEHTVEQVYCNNDQRFLADRFVEGTCPKCGASGARGDQCDTCCQTLDAIDLIDKKCKI 195

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-LPIERRNEVISFVKSGLKDLSLS 210
             H+PV   + +  +  L   Q  + S+Y S  E        +    ++++ GL++  L+
Sbjct: 196 CSHSPVT-RKSKHLYLNLPKLQKTIESWYSSAKEGKHWSANGKAFTEAWLRDGLRERCLT 254

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADL---HV 262
           R    WG+ +P D     +MYVW DA   Y + T  Y D+      K+W  P ++     
Sbjct: 255 RD-LKWGVPVPLDGWKDKVMYVWFDAPIGYPSITANYTDD----WKKWWKNPEEVTLYQF 309

Query: 263 IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH I +PA+L+       +   + +  ++ ++  K SKS  N+    +   E 
Sbjct: 310 MGKDNVPFHTILFPAYLMGTGEKWTMLNHISTTEYLQYENAKFSKS-NNIGVFGQNARET 368

Query: 321 GV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           GV  +  RY+L+       D  +       + N++L N +GN V+R +      ++ ++P
Sbjct: 369 GVPSEVWRYYLISTRPETNDSQFTWTDFIAKANSELLNNLGNFVNRIIKFCNARFNSIVP 428

Query: 379 TPGA--------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-D 429
            P +        F + D+  +     +L +  E+ ++  +  ALA V+ + +  ++Y  D
Sbjct: 429 DPLSWPIPGRDEFDQLDQEFVRDIDNLLNQYIESAESLKLRNALAIVMLISARGNQYLQD 488

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  + L  T+P R + ++ V++ ++  L++L+  F+P  ++ I   L
Sbjct: 489 NKIDYNLLLTSPRRCAQIVLVSMNLVYLLSVLVHPFMPTTSDLILKQL 536


>gi|319787562|ref|YP_004147037.1| methionyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466074|gb|ADV27806.1| methionyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 708

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 206/523 (39%), Gaps = 73/523 (13%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N   H+GH    I AD+  R  R  G  V +    D HG  I  AA+ AGVT
Sbjct: 7   VTNALPYANGPLHLGHLVGYIQADIWVRARRERGQTVHYVCADDTHGTPIMLAAEKAGVT 66

Query: 69  TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            + F+      + R+F+D      + +D +  T    +       +  +  +G I +   
Sbjct: 67  PEAFIAATKAGHERDFQDFG----VHFDWYHSTHSDENRALTERFYAALDARGSIERRSI 122

Query: 125 SGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWME------------ 161
              Y      +  D  V             G + +   A + P   ++            
Sbjct: 123 EQLYDPVKAMFLPDRYVKGTCPKCKSPDQYGDNCEACGATYGPTDLIDPRSAVSGATPEL 182

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF+L  Y + L  +            +  E I   + GL+D  +SR    +G +
Sbjct: 183 RASEHFFFKLGQYTEGLREWLRGDVALPGVKAKLAEWIEG-EGGLRDWDISRDAPYFGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-------------HVIGKD 266
           IP  P    YVW+DA   Y ++   L    G+KA F  A +             H IGKD
Sbjct: 242 IPGHPGKYFYVWLDAPIGYFSSLLALAR-SGNKAGFDEAAMERLLQPGDHAELHHFIGKD 300

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DA 324
           I+ FH ++WPA L    L  P ++  +G++   G K+SKS G  I     + +VG+  DA
Sbjct: 301 IVNFHGLFWPAVLEGNGLRKPDRLHVNGYLTVDGAKMSKSRGTFIMARTYL-DVGLEPDA 359

Query: 325 LRYFLVREIACGKDGFYDKDGLK-----KRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           LRY+     AC   G  D   L       RVN+DL     N+ SR   ++   +  ++ T
Sbjct: 360 LRYYF----ACKSSGGVDDLDLNLSDFVARVNSDLVGKFANIASRCARLLDVHFGNVLAT 415

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR-----------YF 428
           P A  +    +    +   +++  N++ ++            + V R           Y 
Sbjct: 416 PPALVDETGDLSEGWAETARQLLANVRGRIETAPELYTEDNFAAVTRNAMAAADMANEYI 475

Query: 429 DAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKL 469
            A  PW L K    RA    VL   ++    +A +L+  VP +
Sbjct: 476 AATAPWALAKDPARRADLHLVLSTAIQAFADIAGVLKPIVPGI 518


>gi|254485609|ref|ZP_05098814.1| methionyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214042478|gb|EEB83116.1| methionyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 570

 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 220/517 (42%), Gaps = 47/517 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + +  +       +AD   +S+D F R++  ++    +     + ++G I +      
Sbjct: 66  PVEDYCAEMHEVQARIADGFGLSFDHFGRSSSIQNQRLTQHFAGALYNEGLIEEVEQRQI 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNP---------------VQWME 161
           YS  D  +  D            E  +G        Q +P               ++   
Sbjct: 126 YSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLEMRA 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +  F + S  +D+L  +  S  ++ +      +       GL+D  ++R    WG+ + 
Sbjct: 186 TKHLFLKQSKMKDRLDDWINSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGVPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264
                 P     + YVW DA   Y+     ++D   GS   ++W  D           +G
Sbjct: 245 RGDEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWERWWRTDKGADDVRYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA ++ +N P  L   + S  ++ + G + S S G  +   + +E +  
Sbjct: 305 KDNVPFHTLSFPATIMGSNEPWKLVDYIKSFNYLTYDGGQFSTSRGRGVFMDQALEILPA 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P  G 
Sbjct: 365 DTWRWWLLSHAPETSDAEFTWENFQASVNKDLADVLGNFISRITKFCRSKFSEAVPEAGE 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           +  ++ ++++  S  +   +  M+   + ++ A++ ++ +  + Y  A+ PW   KT+PD
Sbjct: 425 YGPAEHALIADLSERVSRYQAAMEAMEVRKSAAELRAIWAAGNEYLQAEAPWTTFKTDPD 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +A+  + + + +I   A+L   F+P  A  +   + V
Sbjct: 485 KAAAQVRLALNLIPFYAVLSAPFIPDAAASMLSCVRV 521


>gi|126738818|ref|ZP_01754514.1| methionyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719999|gb|EBA16706.1| methionyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 581

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 219/531 (41%), Gaps = 58/531 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ ARF R  G +VLF   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARFQRGIGNEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A      F  +      ++A    +S+D F R++   +H   +    K+ + G I +   
Sbjct: 63  AEKPVAEFCAEMHGVQSEIAKGFALSFDHFGRSSSPENHKLTQHFAGKLEEAGLIREVED 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG--------- 164
              YS+ D  +  D            E  +G   +    Q +P   +             
Sbjct: 123 RQVYSIADGRFLPDRYVEGTCPNCGFENARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 165 ------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  F   S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 VRATKHLFLCQSQMKDQLDAWIDSKADWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD-------- 259
            +       P     + YVW DA   Y+   G     +G       ++W  D        
Sbjct: 242 PVKKGGEDWPGMEGKVFYVWFDAPIEYIACAGEWAEANGKSDADWQRWWRTDKGAEDVKY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHKGEKISKSLG 308
           +  +GKD + FH + +PA +L  N    K            + S  ++ + G + S S G
Sbjct: 302 VQFMGKDNVPFHTLSFPATILGTNNYNEKSGDPERWKAVDYIKSFNYLNYDGGQFSTSKG 361

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             I   + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR    
Sbjct: 362 RGIFMDQALEILPADYWRWWLLSHAPENSDAEFTWEDFQQSVNKDLADVLGNFVSRITKF 421

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               +   +P  G F   +++++   +  +Q    +M+   + ++  ++ ++    + Y 
Sbjct: 422 CRSKFGEEVPAAGEFGPEEDALIEELTNRIQAYEGHMEAMEVRKSAQELRAIWVAGNEYL 481

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +  PW   KT+PD+A+  + + + +I   A+L   F+P  A K+ D + V
Sbjct: 482 QSTAPWSTFKTDPDKAAAQVRLGLNLIPLYAVLSAPFIPGSAAKMLDAMGV 532


>gi|51598840|ref|YP_073028.1| methionyl-tRNA synthetase [Borrelia garinii PBi]
 gi|68565975|sp|Q660T5|SYM_BORGA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51573411|gb|AAU07436.1| methionyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 724

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 222/500 (44%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     +
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTS 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++  +  + +    +I +D F RTT K H D  +  + K+   G I +     ++
Sbjct: 67  PLELCNKYYKIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG   +  +   NP+  +  +    +      K   
Sbjct: 127 CNKDSIFLADRYVIGECPECQSIAKGDQCENCSKLLNPIDLINPKCIICKNKPVLKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYIDLPKIKRKLEKWIKNSTTSKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T  L     S   +W  +  V     IGKD + FH + +P
Sbjct: 246 GYENKVFYVWFDAPIGYISITKNLVKNWES---WWKNNEQVNLVQFIGKDNILFHTVIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
           +  + +  N  +  ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++    
Sbjct: 303 SIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I+  
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQIIPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K ++P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|260220414|emb|CBA27928.1| Methionyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 547

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 33/332 (9%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA---- 258
           GL D  +SR    +GI+IPD P    YVW+DA   YL +     +  G KAK        
Sbjct: 63  GLGDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNWFDKGGPKAKHGDTRSFD 122

Query: 259 ---------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI-LHKGEKISKSLG 308
                      H IGKDI+ FH ++WPA L  +    P  VF HGF+ ++ GEK+SKS G
Sbjct: 123 EYMAASDTEQYHFIGKDIVTFHTLFWPAMLKFSGRKTPNNVFVHGFLTVNNGEKMSKSRG 182

Query: 309 NVIDPIEVIEEVGVDA--LRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
             +DP++ +  +G++A  LRY+L  +++   +D  ++ D    RVN+DL     N+ SR+
Sbjct: 183 TGLDPLKYL-SLGMNAEWLRYYLAAKLSARNEDIDFNADDFMARVNSDLIGKYVNIASRA 241

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I K +DG + +   F  +  ++L+        + +  + +   +A  +++ L  +V+
Sbjct: 242 AGFITKRFDGKLTS--DFGPTGAALLAEVRGASDALAQMYEAREYGKATREIMLLADKVN 299

Query: 426 RYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y D  KPW+L K   N      V  V +     L   L   +P LA  +   L V  + 
Sbjct: 300 AYVDQNKPWDLAKDVANNQALHQVCSVLINTFATLTRYLSPVLPGLAQAVQGFLGVDMQQ 359

Query: 484 ----------RCFQSLDQRLKPGFMLHKTFDP 505
                     + +Q L QR+ P   L   F+P
Sbjct: 360 WNVAGDVQAIQPYQHLMQRVTPE-QLDALFEP 390


>gi|302844133|ref|XP_002953607.1| hypothetical protein VOLCADRAFT_82392 [Volvox carteri f.
           nagariensis]
 gi|300261016|gb|EFJ45231.1| hypothetical protein VOLCADRAFT_82392 [Volvox carteri f.
           nagariensis]
          Length = 816

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/518 (22%), Positives = 229/518 (44%), Gaps = 46/518 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ AD  AR+ R  G + ++  GTDE+G      A
Sbjct: 39  RRNVLITSALPYVNNVPHLGNIIGCVLSADCYARYCRARGHNCIYMCGTDEYGTATETKA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +   D+      ++    DI++D F RT  +      + ++K +   G + + 
Sbjct: 99  LEEGLTCQQICDKYHAIHAEIYRWFDIAFDRFGRTPTRAQTAIAQDIFKSLHANGQLVQQ 158

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEE----GYFF 167
                YS     +  D  VY       Y+              NP + +       G   
Sbjct: 159 EMQQLYSEAAGKFLADRFVYGTCPKCGYDDARGDQCDGCGNLLNPTELINPRCKLTGTTP 218

Query: 168 RLSAYQDKLLSYYESHP---EFILPIERRNE--------VISFVKSGLKDLSLSRKTFDW 216
            L + +   L   +  P   E+I     +            ++++ GLK   ++R    W
Sbjct: 219 VLRSTRHVFLDLPQLSPALQEYITTTSTQGGWSANCVQLTNAWMRDGLKLRCITRD-LKW 277

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHVI---GKDILRF 270
           G  +P +     + YVW DA   Y++ T GY   PD       P D+ ++   GKD + F
Sbjct: 278 GTPVPLEGYEDKVFYVWFDAPIGYISITAGY--TPDWEAWWKSPKDVELVQFMGKDNVPF 335

Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +PA  L    P  + K +    ++ ++G K SKS G  +   +  +  + V+  RY
Sbjct: 336 HTVIFPATQLGTQQPWTMMKSISVTEYLNYEGGKFSKSRGTGVFGNQAKDTGIPVEVWRY 395

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +L+       D  +    L  + N++L   +GN ++RS+  + K ++G+IP  T     E
Sbjct: 396 YLLANRPEQADTDFKWSDLAAKNNSELLANLGNFINRSLMFVAKFFEGVIPGATEAGLAE 455

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           ++E       + ++E    ++   +   L  V+S+ ++ +++    KPW   K + D+ +
Sbjct: 456 AEE-----LGKTVEEYISALERIKLKEGLRLVMSISADGNKFLQDTKPWVAVKEDKDKCA 510

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           T++  ++ ++R LA ++  ++P L++KI   + +  E+
Sbjct: 511 TLVATSMGLVRLLAAVMAPYMPSLSSKILSQMALPLES 548


>gi|219684348|ref|ZP_03539292.1| methionyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672337|gb|EED29390.1| methionyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 724

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + K+   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG   +  +   NP+  +  +    +      K   
Sbjct: 127 CNKDSIFLADRYVIGECPECQSIAKGDQCEKCSKLLNPIDLINPKCIICKSKPVLKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E   +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYIDLPKIKTKLEEWIKNSTASKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH + +P
Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWESWWKNNEQVNLIQFIGKDNILFHTVIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++    
Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I+  
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQIIPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K ++P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|302756297|ref|XP_002961572.1| hypothetical protein SELMODRAFT_164891 [Selaginella moellendorffii]
 gi|300170231|gb|EFJ36832.1| hypothetical protein SELMODRAFT_164891 [Selaginella moellendorffii]
          Length = 784

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 225/521 (43%), Gaps = 62/521 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G ++++  GTDE+G      A
Sbjct: 9   RRNILVTSALPYVNNVPHLGNIIGSVLSADVFARYGRLRGYNIIYMCGTDEYGTATETKA 68

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+     + + D  DI +D F RT+       C+ ++KK+  +  +Y+ 
Sbjct: 69  LEEKTSPKEICDKYHDVHKKVYDWFDIRFDKFGRTSSPEQTVICQSIFKKLLAQDRLYED 128

Query: 123 ---------CYSGWYSLRDEAYYND----DEVYKGADGQYYNAQHNPVQWMEEEG----- 164
                    C S    L D              +G   +      NP + +E +      
Sbjct: 129 KINQACRLYCESCQRFLADRFVIGTCPKCGMTARGDQCEKCTHVLNPGELVEPKCKICNS 188

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRK 212
                     F  L   +++L+ Y E     I      N +    ++++ GLK   ++R 
Sbjct: 189 SPHLRETTHLFLDLPKIKNELVDYVEKTS--IAGGWSSNSITITNAWIRDGLKGRCITRD 246

Query: 213 TFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGK 265
              WG+ +P  P++   + YVW DA   Y++ T    N      ++W ++       +GK
Sbjct: 247 -LKWGVPVPL-PRFEDKVFYVWFDAPIGYISITA---NYTPEWEQWWKSEDVELFQFMGK 301

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH + +P  LL       + K + +  ++ ++G K SKS G  V         V V
Sbjct: 302 DNVTFHTVIFPCTLLGTGERWTMMKTLSATEYLNYEGAKFSKSAGIGVFGNDAQDTNVPV 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP 378
           +  RY+L+       D F+    L+ + N +L   +GN V R +S + K     Y   IP
Sbjct: 362 EVWRYYLLSIRPEAADTFFSWADLQAKQNNELLKNLGNFVHRCLSFLAKPEGQGYGSKIP 421

Query: 379 -TPGAFTESDESILSV-----CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
             PGA    +E  L+V      S +LQ+  ++M+   +   L   +S+ S  + Y    +
Sbjct: 422 DAPGA----EEHALTVKLAEEVSELLQQYVDSMEKTKLKNGLKVAMSISSLGNSYLQESE 477

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            W L K +    + V+   + +++ LA +L+ F+P  + K+
Sbjct: 478 FWRLYKEDRPSCNIVVRTAIGLVKILATILEPFMPSFSKKV 518


>gi|254465029|ref|ZP_05078440.1| methionyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685937|gb|EDZ46419.1| methionyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 575

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/525 (21%), Positives = 222/525 (42%), Gaps = 49/525 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    ++ I++AI Y N   H+G+     + AD+ ARF R  G +V+F   TDEHG    
Sbjct: 1   MDGMARILITSAIPYINGIKHLGNLVGSQLPADLYARFQRGRGNEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  A      +  +      ++A    +S+D F R++  ++H   +    K+++ G I
Sbjct: 61  LAAAKADKPVAEYCAEMHAIQAEIAKGFALSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +      YS  D  +  D            E  +G   +    Q +P   +        
Sbjct: 121 REVTEKQVYSNADGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLINPRSAVSG 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E +  +   S  +D+L ++ +S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDAWIDSKKDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD--- 259
            DWG+ +       P     + YVW DA   Y+       +    PD    ++W  D   
Sbjct: 240 LDWGVPVKKGDEDWPGMEGKVFYVWFDAPIEYIACAKEWADASGRPDADWQRWWRTDKGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  + 
Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P  G +   +++++   +  ++    +M+   + ++  ++ ++    + Y  +  
Sbjct: 420 FGEEVPAGGEYGPQEQALIDELTTRIRAYEGHMEAMEVRKSSQELRAIWVAGNEYLQSAA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW + K +P+RA+  + + + +IR  A+L   F+P   + +   L
Sbjct: 480 PWSVFKEDPERAAAQVRLGLNLIRLYAVLSAPFIPHATDTLMAAL 524


>gi|219685229|ref|ZP_03540049.1| methionine--tRNA ligase [Borrelia garinii Far04]
 gi|219673325|gb|EED30344.1| methionine--tRNA ligase [Borrelia garinii Far04]
          Length = 724

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 219/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + K+   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG   +  +   NP+  +  +    +      K   
Sbjct: 127 CNKDSIFLADRYVIGECPKCQSIAKGDQCENCSKLLNPIDLINPKCIICKSKPVLKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E   +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYIDLPKIKTKLEEWIKNSTASKNWNTNALKMTNAFLRDGLKERAITR-DLKWGISVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH + +P
Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWESWWKNNEQVNLVQFIGKDNILFHTVIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++    
Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I+  
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQIIPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K ++P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|16125727|ref|NP_420291.1| methionyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234484|ref|YP_002516920.1| methionyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|25009392|sp|Q9A884|SYM_CAUCR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782857|sp|B8H5U4|SYM_CAUCN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13422851|gb|AAK23459.1| methionyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220963656|gb|ACL95012.1| methionyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 569

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 219/518 (42%), Gaps = 53/518 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G + L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++     +S+D F R++  ++H   +   + + D G I +   
Sbjct: 63  AGQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PVQ 158
              YS+ D+ +  D  V        ++ A G   +   N                   ++
Sbjct: 123 QMVYSVDDKRFLPDRYVEGTCPHCKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNIE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  +   +  QDK+ ++ ++H ++  P   R+     +  GL D  ++R    WGI
Sbjct: 183 VRDTKHLYLLQTKMQDKIRAWVDAHADW--PPLARSIAYKHLDEGLIDRGITRD-LAWGI 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD--------LH 261
            +  D        + + YVW DA   Y+  T      +PD    ++W  D        + 
Sbjct: 240 PVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +GKD + FH + +PA +L +  P       K F+  ++   G K S S    +     +
Sbjct: 300 FMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFN--WLNWYGGKFSTSNKRGVFMDAAL 357

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L      G D  +  +     VN DLA+ +GN V+R +      ++G++
Sbjct: 358 EILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESKFEGVV 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G     +E + +  S  L ++ E M    I ++   + +L    + Y     PW   
Sbjct: 418 PAGGEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEAAPWTAI 477

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           KT+ DRA+ ++   + +    A +   F+P  A KI D
Sbjct: 478 KTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGD 515


>gi|83952859|ref|ZP_00961589.1| methionyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83835994|gb|EAP75293.1| methionyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 570

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/523 (21%), Positives = 226/523 (43%), Gaps = 51/523 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLFARYLRGRGQEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + +  +      ++A    +S+D F R++  ++H   +    ++++ G I +      
Sbjct: 66  PVEQYCAEMHDIQAEIAKGFRLSFDHFGRSSSPQNHRLTQHFAGRLAEAGLIEEVSEKQV 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------------ 164
           YS  D  +  D  +            +G   +    Q +P   +E               
Sbjct: 126 YSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAVSGSTDLEVRE 185

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219
               + R S+ +D+L ++ ++  ++  PI   +    ++  G  L+D  ++R   DWG+ 
Sbjct: 186 TRHLYLRQSSMRDELNAWIDAKKDW--PILTTSIARKWLNDGDGLQDRGITRD-LDWGVP 242

Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHV 262
           +       P     + YVW DA   Y+  +  ++D   G    ++W  D           
Sbjct: 243 VKKGEADWPGMEGKVFYVWFDAPIEYIACSQEWVDAGKGDDWERWWRTDKGAEDVTYTQF 302

Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + ++ +
Sbjct: 303 MGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQALDIL 362

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P  
Sbjct: 363 PADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEEVPAG 422

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           GAF   + +++   +  ++    +M+   + ++  ++ ++    + Y  +  PW   K +
Sbjct: 423 GAFGAEETALIETLTTRIRAYEGHMEAMEVRKSANELRAIWVAGNEYLQSAAPWATFKDD 482

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           P++A+  + + + +IR  A+L   F+P  +  +   +   D+ 
Sbjct: 483 PEKAAAQVRLALNLIRLYAVLSAPFIPDASAAMLKSMQTEDDQ 525


>gi|310815507|ref|YP_003963471.1| methionyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754242|gb|ADO42171.1| methionyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 569

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/521 (22%), Positives = 220/521 (42%), Gaps = 47/521 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGHEVMFLCATDEHGTPAEIAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      ++A    +S+D F R++  ++H   +     ++++G I +      
Sbjct: 66  PVAEYCAEMHDVQAEIAKGFRLSFDHFGRSSSAQNHKLTQHFAGVLAERGFIREVTEMQM 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV---------------QWME 161
           YS  D  Y  D  +            +G        Q +PV               +  E
Sbjct: 126 YSPTDGRYLPDRYIEGTCPNCGFPDARGDQCDNCTKQLDPVDLINPRSAISGATDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +  +   S  QDK+ ++ +S  ++ +      +       GL+D  ++R   DWGI + 
Sbjct: 186 TKHLYLCQSQLQDKIAAWIDSKTDWPVLTTSIAKKWLTDGDGLQDRGITRD-LDWGIPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264
                 P     + YVW DA   Y+ +   ++D   G    ++W  D           +G
Sbjct: 245 KGDADWPGMEGKVFYVWFDAPIEYIASAQEWVDAGKGVDWERWWRTDKGADDVTYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +   + +  +  
Sbjct: 305 KDNVPFHTLTFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALSILPA 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  D  +  VN DLA+ +GN VSR        +  +IP  G 
Sbjct: 365 DYWRWWLLSHAPETSDSEFTWDNFQMSVNKDLADVLGNFVSRVTKFCRSKFGEVIPEGGT 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           +   + ++++  ++ LQ     M    + +A +++ ++    + Y  +  PW   KT+ +
Sbjct: 425 WGARENALIAELTQRLQAYEGFMDAMEVRKASSELRAIWVAGNEYLQSAGPWTTIKTDTE 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            A+    + + +IR  A+L   F+P  +  +   +  AD+ 
Sbjct: 485 TAAMQTRLGLNLIRLYAVLSAPFIPDASATMLAAMKTADDQ 525


>gi|111115415|ref|YP_710033.1| methionyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263519|ref|ZP_03435514.1| methionyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|123145679|sp|Q0SMS1|SYM_BORAP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110890689|gb|ABH01857.1| methionyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215980363|gb|EEC21184.1| methionyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 724

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 218/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   ITAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H +T +  + K+   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQETVQNFFLKLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDLIFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYIDLPKIKTKLEKWIKNPTTSKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWESWWKNNKQVNLVQFIGKDNILFHTIMFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N     ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++    
Sbjct: 303 CIKIGSKENWTTLNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  E I   
Sbjct: 363 PEKSDFQFIWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQHKFWEQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   +    N  +  AL +++ + S  ++ F   +PW+ K+++P     ++   + 
Sbjct: 423 YNKILNLFK----NTELKSALKEILKISSFGNKIFQDNEPWKRKESSPQEIKELILNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|163735330|ref|ZP_02142764.1| methionyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391339|gb|EDQ15674.1| methionyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 582

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/521 (21%), Positives = 215/521 (41%), Gaps = 49/521 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA 
Sbjct: 12  ERHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAA 71

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG     +  +      ++A    +S+D F R++  ++H   +    K+     I +  
Sbjct: 72  KAGKPVDQYCAEMHAIQSEIAKGFQLSFDHFGRSSSPQNHALTQHFAGKLDAANLIDEVV 131

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG-------- 164
               YS  D  +  D  +            +G   +    Q +P   +E           
Sbjct: 132 EKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 191

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                   + + S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWG
Sbjct: 192 EVRQTKHLYLKQSVLKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLRDRGITRD-LDWG 250

Query: 218 IKIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD------- 259
           I +    Q        + YVW DA   Y+         +G +     ++W  D       
Sbjct: 251 IPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANGLEPSEWERWWRTDKGAEDVR 310

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               +GKD + FH + +PA LL +  P  +   + S  ++ + G + S S G  I   + 
Sbjct: 311 YTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQA 370

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++ +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   
Sbjct: 371 LDILPADYWRWWLLSHAPENSDAEFTWENFQTSVNKDLADVLGNFVSRITKFCSAKFGDQ 430

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G +  ++  +L+     L   ++NM    + ++  ++ ++ +  + Y     PW +
Sbjct: 431 VPAGGHYGPTELDLLNRLDESLTRYQDNMSAMEVRKSAQELRAIWASGNEYLQTVAPWTV 490

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KT+P+ A+    + + +     +L   FVP+ + KI + L
Sbjct: 491 FKTDPETAAMQTRLGLNLALLFGVLSSPFVPEASEKILNCL 531


>gi|295837687|ref|ZP_06824620.1| methionine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695943|gb|EDY42876.1| methionine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 572

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 228/515 (44%), Gaps = 56/515 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AA   GV
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAAQGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F        + + D   +++D F R++  ++ +T +   +++ + G I +      
Sbjct: 66  PVAEFCATAHDAQKAVYDGFSLAFDHFGRSSSAQNRETTQHFARRLHENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161
           YS  D  +  D  V        Y  A G Q  N           NP         ++  E
Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSY----YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S  Q+++  +     +S P+    I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQEEVERWIDATADSWPQLSSSIARK-----WLTEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYL--DNPDGS----KAKFWPAD----L 260
           + +P D  P+      + YVW DA   Y+  T     + P+G+    K+ ++ A      
Sbjct: 240 VPVPGDVWPELAAEGKVFYVWFDAPIEYIGATREWADEAPEGAGRDWKSWWYEAGDVRYT 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH++ +PA  +    P  +  F  S  ++ + G K S S    +   + +E
Sbjct: 300 EFMGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQNRGVFTHDALE 359

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  RYF++       D  +  +  +  VN DLA+ +GN V+R +S   K +   +P
Sbjct: 360 LLPADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVP 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             GA  E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   K
Sbjct: 420 EGGAPGEAEAKLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIK 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           T+   A+  L   + +I   A++ + FVP  A  +
Sbjct: 480 TDQAAAALTLRTAMNLIHLYAVVSEPFVPTTAKAM 514


>gi|297800908|ref|XP_002868338.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314174|gb|EFH44597.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 798

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 228/520 (43%), Gaps = 51/520 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 16  KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+     +++ D  DIS+D F RT+     + C+ ++KK+ D   + + 
Sbjct: 76  LEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQAIFKKLWDNKWLSEN 135

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y    + +  D  V      +  N         E+ G     +  +D      ++
Sbjct: 136 TMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQN 195

Query: 183 HPE-------FI-LPI--ERRNEVI------------------SFVKSGLKDLSLSRKTF 214
            P        FI LP+  +R  + I                  ++++ GL+   ++R   
Sbjct: 196 TPRIRDTDHLFIELPLLKDRLEKYINETSVAGSWSQNAIQTTNAWLRDGLRQRCITRD-L 254

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG+ +P +   + + YVW DA   Y++ T    +      K+W  P ++ +   +GKD 
Sbjct: 255 KWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTS---EWEKWWKNPENVELYQFMGKDN 311

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDA 324
           + FH + +P+  L    N  L K +    ++ ++  K SKS G  +   +V +  + V+ 
Sbjct: 312 VPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVEV 371

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTP 380
            RY+L+       D  +    L+ ++N +L N +GN V+R +S I K     Y  +IP  
Sbjct: 372 WRYYLLTNRPEVSDTSFSWTDLQAKLNGELLNNLGNFVNRVLSFIAKPNNAGYGSVIPD- 430

Query: 381 GAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               ES     S+  +V   + E  E M+   + + L   + + SE + Y    + W+L 
Sbjct: 431 AHDAESHPLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNFYLQTSQFWKLY 490

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K +    + V+     ++  LA LL+ F+P  + ++F  L
Sbjct: 491 KEDKPLCAIVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQL 530


>gi|156364627|ref|XP_001626448.1| predicted protein [Nematostella vectensis]
 gi|156213324|gb|EDO34348.1| predicted protein [Nematostella vectensis]
          Length = 646

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 242/548 (44%), Gaps = 47/548 (8%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE EK + I++A+ Y N  PH+G+    +++ DV AR+ R+ G + L+ +GTDE+G    
Sbjct: 3   KEGEKNILITSALPYVNNVPHLGNIIGCVLSGDVFARYCRIRGFNTLYISGTDEYGTATE 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+  +    + D  +I +D F RTT +      + ++ K+  +  +
Sbjct: 63  TKALEEGLTPQQVCDKYHKLHCSVYDWFNIQFDFFGRTTTENQTKIAQDIFWKLHQQNHL 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +           + +  D  V        Y+ A G   +A    +   E +    ++  
Sbjct: 123 VEDTVEQLQCTGCQRFLADRFVEGICPFCNYEDARGDQCDACGKLINATELKSPKCKVCG 182

Query: 172 YQDK-------LLSYYESHPEFILPI------ERRNEVISFVKSGLKDLSLSRKTFDWGI 218
              +        L+  ES  +             R    S+++ GLK   ++R    WG 
Sbjct: 183 GTPEKKTSRHLFLNLTESSQDISCTSPGNWSPNARQITRSWIQEGLKPRCITRD-LKWGT 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270
            +P +     + YVW DA   YL+ T  Y D  +    K+W     V     + KD + F
Sbjct: 242 PVPLEGYTDKVFYVWFDAPIGYLSITANYTDQWE----KWWKNPKQVTLYQFMAKDNVPF 297

Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327
           H + +P+ L+ AN    L   + +  ++ ++ +K SKS G  V         +  D  R+
Sbjct: 298 HTVVFPSTLIGANDNYTLLNNISATEYLNYEDDKFSKSRGVGVFGDNAADSGIPADIWRF 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L+     G+D  +       + N++L N +GN ++R++  +  ++ G IP      E D
Sbjct: 358 YLLYMRPEGQDSAFSWSDFAIKNNSELLNNLGNFINRALMFLQNNFAGKIPDLELMDE-D 416

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RA 444
            + +++ +R L+   ENM    +   L  V+++    ++Y  A KPW L K +     RA
Sbjct: 417 TNFIALVNRELKVYYENMDKLRLREGLKVVLNISKYGNQYVQANKPWVLVKGSDAERCRA 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLKPGFMLHK 501
            TV+ +   +   L++L+  ++P ++ +I   L V  +  C    +     LKPG ++  
Sbjct: 477 GTVIGLACNLSFMLSLLIHPYMPTVSKEIQTQLKVRAQEDCGILTEHFVPFLKPGHVIG- 535

Query: 502 TFDPIFPR 509
           T  P+F +
Sbjct: 536 TPKPLFQK 543


>gi|326777757|ref|ZP_08237022.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658090|gb|EGE42936.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 574

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 230/529 (43%), Gaps = 47/529 (8%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ AG+
Sbjct: 6   VTSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKEAGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           +   F  Q     + + D  ++++D F R++ +++ +  +   +K+ + G I +      
Sbjct: 66  SVAEFCAQAHDAQKAVYDGFELAFDYFGRSSSQQNVEITQHFARKLHENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-LSYYE 181
           YS  D  +  D  V     + G D    +   N  + ++        SA      L   E
Sbjct: 126 YSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTDLEVRE 185

Query: 182 SHPEFILPIERRNEVISFVKS-------------------GLKDLSLSRKTFDWGIKIPD 222
           +   F+L  + ++EV  ++ +                   GL D +++R   DWG+ +P 
Sbjct: 186 TKHLFLLQSKLQHEVEEWIATVSAEWPHLSTSIARKWLTEGLNDRAVTRD-LDWGVPVPA 244

Query: 223 D--PQY-----IMYVWIDALTNYLTTTG-YLD-NPDGS----KAKFWPAD-----LHVIG 264
           D  P+      + YVW DA   Y+  T  + D + DG     K+ ++ AD        + 
Sbjct: 245 DTWPELAAEGKVFYVWFDAPIEYIAATKEWADASADGESRDWKSWWYEADDTVRYTQFMA 304

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA  L    P  K     GF  +   G K S S    +     +E +  
Sbjct: 305 KDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTFYGGKFSTSQKRGVFTDAALEILPG 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P    
Sbjct: 365 DYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGRV 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   KT+ D
Sbjct: 425 AGEAEAKLGEEIARLLGEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDAD 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            A+  L   + +I   A++ + F+P  A  +     +  +   + + +Q
Sbjct: 485 GAALTLRTAMNLIHLYAVVSEPFIPASAAAMRGAFALESDTATWVTAEQ 533


>gi|320537817|ref|ZP_08037738.1| methionyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145356|gb|EFW37051.1| methionyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 774

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 221/516 (42%), Gaps = 47/516 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I++A+ Y N  PH+G+  +++ ADV ARF RL G   L+  GTDE+G      A   G T
Sbjct: 6   ITSALPYVNNIPHLGNLLQVLSADVFARFCRLKGYKTLYICGTDEYGTATETKALQEGKT 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D       D+ +  +I++D F RT+  +  +  + ++  +   G I +      Y
Sbjct: 66  PQQLCDYYHAIHSDIYNWFNIAFDYFGRTSTPQQTEITQQIFLDLEKNGFITEHEMQQLY 125

Query: 129 SLRDEAYYNDDEV--------YKGADG-------------QYYNAQHNPVQWMEEEGYFF 167
             +   +  D  V        Y+ A G             +  N Q        E     
Sbjct: 126 CPQCRRFLADRYVRGTCPHCSYEDARGDQCEQCGKLLDPTELKNPQCATCGGTPEPQTTK 185

Query: 168 RLSAYQDKLLSYYES-HPEFILPIERRNEVI----SFVKSGLKDLSLSRKTFDWGIKIPD 222
            L      ++S Y+    E     E  N  +    S+++ GL++ +++R    WGI +P 
Sbjct: 186 HLYINLPAIISQYQPWMEEASKNGEWSNNALQMTKSWIRDGLQERAITRD-LQWGIPVPK 244

Query: 223 D--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIY 274
               + + YVW DA   Y++ T    +  G   K W  D         IGKD + FH + 
Sbjct: 245 AGYEKKVFYVWFDAPIGYISITKSFTDITGGDWKSWWLDQKDVELFQFIGKDNIPFHTVI 304

Query: 275 WPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P  L+ +     K   + S  ++ ++  K SKS G  +   +  E  +  D  R++L  
Sbjct: 305 FPCSLIGSGQNWTKLFHMSSTEYLNYESGKFSKSKGVGVFGSDAKESGIPADMWRFYLFY 364

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     ++RVN++L     NLV+R+ S I + Y+G IP     T+S  + +
Sbjct: 365 NRPEKNDTQFTWKDFQERVNSELIGNFCNLVNRTFSFISRYYNGCIPEVDG-TQSSRADV 423

Query: 392 SVCSRVLQEIRENMQNQL--------IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +   + L++  E+ +  +        +     Q+  L S  ++ F   +PW+ +  +P++
Sbjct: 424 AEPIKQLRKAVESYKKSITDLMDWANLRDGFHQIFELSSIANKAFQDGEPWKNRDADPEK 483

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              +L      I+ L IL+ +F+P+ A++    L +
Sbjct: 484 TEALLSELCYFIKDLLILIHSFMPEYASQAASFLGI 519


>gi|114331896|ref|YP_748118.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313375|sp|Q0AES9|SYM_NITEC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114308910|gb|ABI60153.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 701

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 215/514 (41%), Gaps = 54/514 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+  G
Sbjct: 6   ILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVYYVCADDAHGTPIMLRAEREG 65

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI----LWKKISDKGDIYK 121
           ++ +  + +  + + RD      I++D +  T    H D  R     +++K+   G I  
Sbjct: 66  ISPEALIARVYTEHLRDFTG-FHIAFDQYYST----HSDETRYYAEDIYQKLKAAGLIAI 120

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQY------YNAQHNPVQWME--------- 161
                 Y      +  D  V       GA  QY        A + P +            
Sbjct: 121 RSIEQLYDPVKNLFLPDRFVKGECPKCGAVDQYGDSCEACGAAYTPTELKNPYSAISGAT 180

Query: 162 -----EEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLS 210
                 E +FF+LS     D L  +  S     L +E  N++  ++    ++ L D  +S
Sbjct: 181 PIRKASEHFFFKLSDPRCSDFLRKWTRSGNH--LQVEAANKMAEWLGEEGENKLSDWDIS 238

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL-----HVIG 264
           R    +G +IP +     YVW+DA   Y+ +   L    G    ++W         H IG
Sbjct: 239 RDAPYFGFEIPGETDKYFYVWLDAPIGYMGSFKKLCTEQGIDFDQYWKKGATTELYHFIG 298

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
           KDIL FHA++WPA L +A    P ++F+HGF+   GEK+SKS G  I     +++ +  +
Sbjct: 299 KDILYFHALFWPAMLENAGYRTPTQIFAHGFLTVNGEKMSKSRGTFITAESYLQQRLNPE 358

Query: 324 ALRYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   ++    +D   + +    RVNADL     N+ SR    I K +DG +     
Sbjct: 359 WLRYYYAAKLNGSMEDIDLNLEDFVTRVNADLVGKYINIASRCAGFISKCFDGKLVAGED 418

Query: 383 FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--T 439
           +    +++    S     + E   + +    A+  ++    EV+       PWE+ K  T
Sbjct: 419 YQLLQQTVDEYFSSWQPGVIEAAYEARDFSAAIRHIMKRTDEVNELIHVLAPWEIAKDET 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                     + +++   L+  L+  +P  A +I
Sbjct: 479 RERELHRACSLGIQMFYLLSCYLKPVLPYTAERI 512


>gi|328675609|gb|AEB28284.1| Methionyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 619

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 208/460 (45%), Gaps = 49/460 (10%)

Query: 62  AQNAGVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A++ G+T +  V + S N  RD AD  +I++D++  T    + +    ++ K+++K  I 
Sbjct: 4   AKSLGITPEELVAKYSNNHQRDFAD-FEINFDNYHSTHNTLNKEIVEDIYSKLNNKNLIS 62

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------- 161
           K   +  Y    + +  D  V KG      A+ QY        A ++P + +        
Sbjct: 63  KKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPKSVVSG 121

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR   
Sbjct: 122 KTPIQKNSEHFFFDLPALEKNIKDWIESNK--LLQPEVANKLAEWFEQGLQSWDISRDAP 179

Query: 215 DWGIKIPD-DPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKD 266
            +G  IPD + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKD
Sbjct: 180 YFGFAIPDTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFDDFWGDSSSESELYHFIGKD 239

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L S     P  +F++GF+   G+K+SKS G  I     +  +    LR
Sbjct: 240 IIYFHALFWPAILSSTGYKTPTSIFANGFLTVNGKKMSKSRGTFIQARTYLNNLKPSYLR 299

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+    +    D    + +    + N+D+   + N+ SR    I K +DG +        
Sbjct: 300 YYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIHKKFDGTLSN----EI 355

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
            D  + S  S+    I +  + +   +A+  ++SL  + +++ D  KPW+L K      +
Sbjct: 356 FDPKLESEFSKNHNSITQAFEKREFAQAVRLIMSLADKANQFIDYHKPWQLAKEEGQEQK 415

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
              V    + + + L   L+  +P +   A +  +I F++
Sbjct: 416 VHQVCSQGINMFKVLVNYLKPIIPSIVAEAERFLNIEFIS 455


>gi|147905173|ref|NP_001079984.1| methionyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
 gi|82187134|sp|Q6PF21|SYMC_XENLA RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|34785909|gb|AAH57757.1| MGC69150 protein [Xenopus laevis]
          Length = 905

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 243/549 (44%), Gaps = 76/549 (13%)

Query: 3   EREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           E EK + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G     
Sbjct: 259 EGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATET 318

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +   D+ +     +    +IS+D F RTT +      + ++ ++ ++  + 
Sbjct: 319 KAMEEGLTPQQICDKYNAIHTAIYQWFNISFDYFGRTTTQHQTTISQDIFHRLLEREFLL 378

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG------------------QYYNAQH 154
                     + + +  D  V        Y+ A G                  Q    + 
Sbjct: 379 TDTVEQLRCEKCQRFLADRFVEGICPFCNYEEARGDQCDKCGKLINAVELKKPQCKICKQ 438

Query: 155 NPVQWMEEEGYFF--------RLSAYQDKLLSY--YESHPEFILPIERRNEVISFVKSGL 204
           +PV  ++   + F        RL  + ++  S   + S+  FI          S+++ GL
Sbjct: 439 SPV--IKSSKHLFLDLPKLEKRLEQWLEQSFSTGDWTSNARFI--------TRSWIRDGL 488

Query: 205 KDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLH 261
           K   ++R    WG  +P D     + YVW DA   Y++ T  Y D  +    K+W +   
Sbjct: 489 KPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----KWWKSPQQ 543

Query: 262 V-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDP 313
           V     + KD + FH++ +P+ LL A  N  L   + +  ++ ++  K SKS G  V   
Sbjct: 544 VQLYNFMAKDNVPFHSVVFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGVGVFGD 603

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +     +  D  R++L+     G+D  +    L  + N++L N +GN V+R+   + K +
Sbjct: 604 MAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFF 663

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +G +P     +E D+ +L+  +  LQ+    ++   I  AL  ++++    ++Y    +P
Sbjct: 664 NGCVPEMELLSE-DKRLLAQVAAELQQYNLLLEKVRIRDALRCILNISRHGNQYIQVNEP 722

Query: 434 WELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR------ 484
           W+  K N     RA TV  V V +   L+I+L  ++P +++ I + L +  E++      
Sbjct: 723 WKCIKGNQQEQKRAGTVTGVAVNMAALLSIMLHPYMPTISSVIQEQLLMPQESKVLTTDF 782

Query: 485 --CFQSLDQ 491
             C QS  Q
Sbjct: 783 CCCLQSGHQ 791


>gi|255560103|ref|XP_002521069.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223539638|gb|EEF41220.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 617

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 230/530 (43%), Gaps = 66/530 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  + I++A+ Y N  PH+G    ++  DV AR+ RL G +VL+  GTDE+G      A 
Sbjct: 26  KRNVLITSALPYVNNVPHLG----VLNGDVFARYCRLRGHNVLYICGTDEYGTATETKAM 81

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   D+     +++ D  DIS+D+F RT+  +  + C+ ++KK+ +   + +  
Sbjct: 82  EENCTPQEICDKYHAIHKEVYDWFDISFDEFGRTSTPQQTEICQAIFKKLMENNWLSENI 141

Query: 124 YSGWYSLRDEAYYNDDEVYK-----GAD------------GQYYN-----------AQHN 155
               Y    E +  D  V       G D            G++ N            Q  
Sbjct: 142 MQQLYCDTCERFLADRFVEGTCPTLGCDYDSARGDQCEKCGKFLNPTELINPRCKVCQTT 201

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211
           P +  +    F  L   +D L SY     E  +        I    ++++ GLK   ++R
Sbjct: 202 P-RTRDTNNLFLELPLLKDNLQSYIS---EMSVTGSWSQNAIQTTHAWLRDGLKPRCITR 257

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266
               WG+ +P +     + YVW DA   Y++ T     PD  K    P ++ +   +GKD
Sbjct: 258 D-LKWGVPVPLEKFKDKVFYVWFDAPIGYISITSCY-TPDWEKWWKNPENVELYQFMGKD 315

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            + FH + +P+ L+    N  L K +    ++ ++  K SKS G     + V      DA
Sbjct: 316 NVPFHTVMFPSTLIGTRENWTLMKNISVTEYLNYESGKFSKSKG-----VGVFGNDARDA 370

Query: 325 ------LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL----KDYD 374
                  RY+L+       D  +  +  + ++N +L + +GN + R +S I     K Y 
Sbjct: 371 HHPAEVWRYYLLANRPEISDTIFTWEDFQAKLNNELIHNLGNFIHRVLSFIANTSGKGYG 430

Query: 375 GMIP-TPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            +IP  PGA +       ++  + ++ E  + M    + + L   +S+    + Y  A +
Sbjct: 431 TVIPDAPGAESHPLTIKFAIDVTNLVDEYVKAMDQVKLKQGLKCAMSISGAGNTYLQASQ 490

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            + L + +    S V+  +V V+  LA LL+ F+P  ++K+F +L +  E
Sbjct: 491 YFRLYEEDQASCSIVVRTSVGVVCILARLLEPFMPSFSHKVFKLLKLPPE 540


>gi|167043416|gb|ABZ08118.1| putative tRNA binding domain protein [uncultured marine
           microorganism HF4000_APKG1C9]
          Length = 729

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 232/558 (41%), Gaps = 99/558 (17%)

Query: 12  AIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           A  Y N   H+GH A   + AD+  R+ R  G  VL  +G+DEHG  I   A+  G   +
Sbjct: 2   AWPYANGPLHLGHVAGNCLPADIQFRYERARGRRVLMCSGSDEHGTPITLTAEEEGAHPQ 61

Query: 71  VFVDQ----NSRNFRDMADVLDISYDD---------FIRTTEKRHHDTCR-----ILWKK 112
             VD     N +   DM     +  D          + RT++ RH +  R     +L  K
Sbjct: 62  EIVDHFHQINKKALIDMGCSWAMDVDPRGPEYGGALYNRTSDPRHKELVRDLFTLMLEAK 121

Query: 113 ISDKGDIYKGCY---SGWYSLRDEAYYNDDE---VYKGADGQY-------YNAQH--NPV 157
           + ++  + + C     G      + Y   D     + GA G         Y      NP+
Sbjct: 122 MLERKTMQQYCSVSKDGSIRFLPDRYVEGDCPVCSFSGARGDQCDDCGATYETHELINPI 181

Query: 158 QWMEEEG---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             ++ +           FFRL  +QD L S+Y    E   P   R+   +++  GL+  +
Sbjct: 182 SKLDADANIEVRNTDHLFFRLDLFQDSLNSHYLERKEVWKP-NVRSMTKNWLDMGLRPRA 240

Query: 209 LSRKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTT--------GYLDNPDGSKA--K 254
           ++R   DWGI++P    +     +YVW +A+  Y T              +PDG  A   
Sbjct: 241 VTRD-IDWGIELPLSGSEWDSKRVYVWFEAVQGYYTCARIWAERFADEAGHPDGVDAWRN 299

Query: 255 FW--------PADLHVIGKDILRFHAIYWPAFLLSAN----------LPLPK------KV 290
           +W        P  L+ +GKD + FH I WPA L+  N           PLP        V
Sbjct: 300 WWTVSGDGYVPKHLYFMGKDNIPFHTIIWPAILMGINSAQSGNPVSHTPLPNDLVLEANV 359

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            ++ +++ +G + SKS  + I     +E    D LRY+L   +  G D  +  D    RV
Sbjct: 360 PANQYLMLQGGQFSKSRKHAIWLPSFLERFDPDTLRYYLSINMPEGHDTDFRWDEFVDRV 419

Query: 351 NADLANGIGNLVSR--SVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRE 403
           N +L     N V R  ++S  L D DG  P     +P   TE+     S+ SR L++   
Sbjct: 420 NNELIGTYANFVHRVMTLSHRLSD-DGSNPLSDFDSPDEHTEAQ----SIISRHLEDAIH 474

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPW---ELKKTNPDRAS-TVLYVTVEVIRQLA 459
           +M+ Q    AL  ++++    +       PW   +   T   R S + L  T  + R LA
Sbjct: 475 SMERQRFKEALRCIMNIAQLGNSILQEAAPWKHLDGDDTPEARKSLSSLAFTWRMCRGLA 534

Query: 460 ILLQAFVPKLANKIFDIL 477
           + L+ F+P  +++++ +L
Sbjct: 535 VTLRPFIPYQSDRLWAML 552


>gi|187918449|ref|YP_001884012.1| methionyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|226710894|sp|B2S0T6|SYM_BORHD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119861297|gb|AAX17092.1| methionyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 729

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 223/515 (43%), Gaps = 63/515 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+ G++ L+  GTDE+G      A 
Sbjct: 2   KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT KRH +T + L+ K+   G   +  
Sbjct: 62  IEKTTPEELCNKYYEIHKSIYEWFNIKFDIFGRTTNKRHKETVQDLFLKLEKNGYTTEKE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE--------------------- 162
              ++  +D+ +  D  V         NA+ +  +   +                     
Sbjct: 122 SEQFFCKQDQMFLADRYVTGECPNCGNNAKGDQCENCSKLLSPTDLINPKCIICKNIPII 181

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSRKTFD 215
              +  +  L   +D+L S++    E  L        I    +F++ GLK+ +++R    
Sbjct: 182 KTTKHIYIDLPKIKDEL-SHWMQITE--LNTNWNTNAIKITNAFLRDGLKERAITRD-LK 237

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           WGI +P       + YVW DA   Y++ T  +     S   +W  +     +  IGKD +
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWES---WWKNNEETNLVQFIGKDNI 294

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P+  L +  N  +  K+ S  ++ ++  K SKS G  I   +VI   +  D  
Sbjct: 295 LFHTVIFPSIALGSKENWTMLSKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDIW 354

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+++        D  +  D   +RVN++L     NLV+R ++   K +   I        
Sbjct: 355 RFYIYYNRPEKSDFQFMWDDFMERVNSELIGNFSNLVNRVLTFYKKFFGDQIDK------ 408

Query: 386 SDESILSVCSRVLQEIRENMQNQL-------IHRALAQVISLVSEVDRYFDAQKPWELKK 438
                + +     QEI       L       +  AL +++ +    ++ F  ++PW+ K 
Sbjct: 409 -----IEIKEDFWQEINLKYDKTLNFFKQVELKSALKEILDISRTGNKIFQDKEPWKTKD 463

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + P +   +L   + +IR L+IL+  F+P  ++KI
Sbjct: 464 STPQKTKELLLNLIYLIRDLSILISPFIPHTSDKI 498


>gi|89055636|ref|YP_511087.1| methionyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|123401013|sp|Q28MK0|SYM_JANSC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|88865185|gb|ABD56062.1| methionyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 570

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/522 (22%), Positives = 220/522 (42%), Gaps = 53/522 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG    
Sbjct: 1   MSTTSRTLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGQEVLFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +         ++A    +S+D F R++  ++H   +    K++D G I
Sbjct: 61  LAAAKAGKPVAEYCADMHAVQAEIARGFRLSFDHFGRSSSPQNHALTQHFAGKLADAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM-------- 160
            +      YS  D  +  D  +            +G   +    Q +P   +        
Sbjct: 121 AEVEEKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISG 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSR 211
                  E +  + R S  + +L  +  S  ++  PI   +    ++  G  L+D  ++R
Sbjct: 181 STDLEVRETKHLYLRQSQLRGQLSDWISSKTDW--PILTTSIAKKWLNDGDGLQDRGITR 238

Query: 212 KTFDWGIKI-------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-- 259
              DWG+ +       P     + YVW DA   Y+         +GS +   ++W  D  
Sbjct: 239 D-LDWGVPVKRGDADWPGMEGKVFYVWFDAPIEYIACAAEAVE-EGSISDWERWWRVDKG 296

Query: 260 ------LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVI 311
                 +  +GKD + FH + +PA +L +  P  L   + S  ++ + G + S S G  +
Sbjct: 297 ADDVRYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGV 356

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR       
Sbjct: 357 FMDQALEILPSDYWRWWLLSHAPETSDAEFTWEAFQQDVNKDLADVLGNFVSRITKFCRS 416

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            +  ++P  G +   + ++++   + L   + +M    I +A A++ ++    + Y  + 
Sbjct: 417 KFGEVVPEGGDYGPQETALIADLDKRLAAYQTHMDAIDIRKAAAELRAIWVAGNEYLQSA 476

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            PW   KT+PDRA+ +    + +I   A L   F+P  A  +
Sbjct: 477 APWTAFKTDPDRAAAITRFALNLIPFYAGLSAPFIPDAAQAM 518


>gi|110679753|ref|YP_682760.1| methionyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123361874|sp|Q166L9|SYM_ROSDO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109455869|gb|ABG32074.1| methionyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 572

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 215/521 (41%), Gaps = 49/521 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA 
Sbjct: 2   ERHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG     +  +      ++A    +S+D F R++  ++H   +    K+ +   I +  
Sbjct: 62  KAGKPVDEYCAEMHAIQSEIAKGFRLSFDHFGRSSSAQNHRLTQHFAGKLDEANLIDEVI 121

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG-------- 164
               YS  D  +  D  +            +G   +    Q +P   +E           
Sbjct: 122 EKQVYSHADGRFLPDRYIEGTCPNCAYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 181

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                   + + S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWG
Sbjct: 182 EVRETKHLYLKQSVLKDQLDAWIDSKTDWPVLTTSIAKKWLHDGDGLRDRGITRD-LDWG 240

Query: 218 IKIPDDPQ-------YIMYVWIDALTNYLTTT---GYLDNPDGSK-AKFWPAD------- 259
           I +    Q        + YVW DA   Y+         +N + S   ++W  D       
Sbjct: 241 IPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANNLEQSDWERWWRTDKGADDVR 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               +GKD + FH + +PA LL +  P  +   + S  ++ + G + S S G  I   + 
Sbjct: 301 YTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQA 360

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   
Sbjct: 361 LELLPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNFVSRITKFCAAKFGSE 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  GA+  ++  +L+     L   ++ M    + ++  ++ ++ +  + Y     PW +
Sbjct: 421 VPAGGAYGSAELELLTKLDESLTRYQDYMGAMEVRKSAQELRAIWASGNEYLQTVAPWSV 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KT+P+ A+    + + +     +L   FVP  + KI   L
Sbjct: 481 FKTDPETAAMQTRLGLNLALLFGVLSSPFVPDASEKILKCL 521


>gi|148977648|ref|ZP_01814224.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963163|gb|EDK28431.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 18/297 (6%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+ +   L +
Sbjct: 11  LQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCD 70

Query: 248 P--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              D    ++W  D      H IGKDI+ FH+++WPA L  +    P  VF HG++   G
Sbjct: 71  KRDDLDFNEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVHGYVTVNG 130

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIG 359
            K+SKS G  I     +  +  + LRY+   ++    D    + +   +RVNAD+ N I 
Sbjct: 131 AKMSKSKGTFIKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNADVVNKIV 190

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRENMQNQLIHRALAQV 417
           NL SR+   I K ++G +    A  E     ++   R+  L E RE        RA+ ++
Sbjct: 191 NLASRNAGFITKRFEGKLAAEFAEPELYNEFVAAAERIGELYETRE------FSRAIREI 244

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
            +L  + ++Y D + PW L K          V  V + + R L   L+  +P+LA +
Sbjct: 245 TALADKANQYIDEKAPWVLAKEEGKEKELQEVSSVGINLFRVLMAYLKPVMPELAAR 301


>gi|295688954|ref|YP_003592647.1| methionyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430857|gb|ADG10029.1| methionyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 569

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 216/516 (41%), Gaps = 53/516 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G + L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFQRARGHETLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A      +  +      D+     +S+D F R++  ++H   +   + + D G I +   
Sbjct: 63  ANQDVATYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN------------------PVQ 158
              YS+ D+ +  D  V        ++ A G   +   N                   ++
Sbjct: 123 QMVYSVDDKRFLPDRYVEGTCPHCGFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNIE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +   DK+ ++ +SH ++  P   R+     +  GL D  ++R    WGI
Sbjct: 183 VRDTRHLYLLQTKMADKIRAWVDSHADW--PQLARSIAYKHLDEGLIDRGITRD-LAWGI 239

Query: 219 KIPDD----PQY---IMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD--------LH 261
            +  D    P +   + YVW DA   Y+  T      +PD    ++W  D        + 
Sbjct: 240 PVAKDGAPRPGFEDKVFYVWFDAPIEYIAATQEWAEASPDRDWKRWWRTDAGAEDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +GKD + FH + +PA +L +  P       K F+  ++   G K S S    +     +
Sbjct: 300 FMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFN--WLNWYGGKFSTSNKRGVFMDAAL 357

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           + +  D  R++L      G D  +  +     VN DLA+ +GN V+R +      +DG++
Sbjct: 358 DILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTESKFDGVV 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G     +E + +  S  L ++ E M    I ++   + +L    + Y     PW   
Sbjct: 418 PEGGQPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEAAPWTAI 477

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+ DRA+ ++   + +    A +   F+P  A KI
Sbjct: 478 KTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKI 513


>gi|281207432|gb|EFA81615.1| methionyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 732

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 225/512 (43%), Gaps = 46/512 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    +++ DV AR+ R+ G + ++  GTDE+G      A
Sbjct: 18  QRNILITSALPYVNNVPHLGNIIGCVLSGDVYARYCRMRGYNTIYICGTDEYGTATETKA 77

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT K   D+     RD+    +I +D F RT+     +  + ++ K+         
Sbjct: 78  LQEGVTPKEICDRYHVIHRDIYKWFNIGFDKFGRTSTDSQTEIAQDIFMKLYKNELTTSE 137

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWM----------- 160
                Y  R   +  D  V        ++ A G Q  N     NP   +           
Sbjct: 138 EIEQLYCERCNMFLADRYVEGTCPHCQFEDARGDQCDNCTKMLNPTDLIRPRCKLDSTTP 197

Query: 161 ---EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                +  F  L   Q +L  +  +S P +    +R     S+VK  LK   ++R    W
Sbjct: 198 VLKSTKHIFLSLPKIQQRLDDFVTQSSPIWSENSQRITN--SWVKGELKSRCITRD-LKW 254

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHVI---GKDIL 268
           G  +P +   + + YVW DA   YL+ T  Y +  +    ++W  P ++ ++   GKD +
Sbjct: 255 GTPVPLEEFKEKVFYVWFDAPIGYLSITKEYTEQWE----QWWKNPKNVELVQFMGKDNV 310

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDAL 325
            FH + +P+ L+ +     L   + +  ++ ++  K SKS    V     +   V  D  
Sbjct: 311 PFHTVIFPSSLIGSGDQYTLLHNLSTTEYLNYESGKFSKSRNTGVFGDNAMGTGVPADIW 370

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L+       D  +       + N +L +  GNLV+R +  +  D +G+IP      +
Sbjct: 371 RYYLLSNRPEKIDSTFSWADFGLKTNTELLSNFGNLVNRVLKQVSSDLNGVIPKI-ELND 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   ++   ++  E   ++++  I   L   +S+    ++Y  + KPWELK+ +P R  
Sbjct: 430 EDRQFIADVDKLYIEYLNDLEHVHIKDGLRTAMSMSKLGNQYMQSNKPWELKEKDPLRFG 489

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+L V V  I+ LA + + ++P++  K+ + L
Sbjct: 490 TILTVLVNTIKLLATVFEPYLPEITAKVHEQL 521


>gi|297158890|gb|ADI08602.1| methionyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 589

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 221/524 (42%), Gaps = 55/524 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV AR+ R  G DVL+   TDEHG     AA+ AG+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYARYMRQRGHDVLYICATDEHGTPAELAAKEAGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D   +++D F R++  ++ +  + + +++   G I +      
Sbjct: 66  PVGEFCAQQHHAQKAVYDGFSLAFDYFGRSSSAQNVEITQTIARELKANGFIEERSIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQWME 161
           YS  D  +  D  +        Y  A G Q  N           NP         ++  E
Sbjct: 126 YSNADGRFLPDRYIEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSSDLEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S    ++ ++ + H    P     I R+     ++  GL+D +++R   DWG
Sbjct: 186 TKHLFLLQSKLAGEVAAWVDEHGKDWPTLASSIARK-----WLNEGLQDRAITRD-LDWG 239

Query: 218 IKIPDDP-------QYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADL-------H 261
           + +P D          + YVW DA   Y+  T      +P     K W  D+        
Sbjct: 240 VPVPADTWPDLAAEGKVFYVWFDAPIEYIGATKEWSDLDPANRDWKSWWYDVDQTVRYTE 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF--ILHKGEKISKSLGNVIDPIEVIEE 319
            + KD + FH + +PA LL       K  +   F  + + G K S S    +     +E 
Sbjct: 300 FMAKDNVPFHTVMFPATLLGTRDAWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDAALEL 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P 
Sbjct: 360 LPADYWRYFLMANAPESDDTSFTWEHFAATVNKDLADTLGNFVNRVLSFSRKRFGDEVPA 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E++  +    +R+L E  E M      +A A + +L S  + Y + + PW   KT
Sbjct: 420 GKAAGEAEARLGEEIARLLAEYEEYMDALQFRKAAAALRALWSAGNSYLEEKAPWLEIKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           + + A+  L   + +I   A++ + F+P  A  +     +AD+ 
Sbjct: 480 DQEGAALTLRTAMNLIHLYAVVSEPFIPASARAMRSAFALADDT 523


>gi|255513959|gb|EET90224.1| methionyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 552

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 230/523 (43%), Gaps = 65/523 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + +K  +++A+ Y  A PH+G+    I+ ADV  ++ ++ G D +F  G+D+HG  I 
Sbjct: 1   MNKTQKFIVTSALPYAEAVPHLGNFVGSILPADVYFKYLKMKGEDAIFICGSDQHGTPIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A  AG+T     ++     + + +    ++  + +T  + +  T   +++ +   G I
Sbjct: 61  LKAIKAGITPDRLSNEVHEKIKKVMERSGCTFTYYGKTHSESNKLTVYEIFESLRKNGYI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME------- 161
            +   +  Y   D+ + +D  +        Y  A G Q  N  H  +P + +E       
Sbjct: 121 IETEDTQAYCSVDDRFLSDRFIIGTCPYCGYSDARGDQCENCGHLLSPQELIEPYCAVCG 180

Query: 162 EEGYFFR--------LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +   FR        L A   ++ ++ ESH          N+ +S+++ GLK   ++R  
Sbjct: 181 NKKLEFRKTKNLALDLEALSGEIKAFVESHKHNNWTKNAINKTLSYLEQGLKPRDITR-N 239

Query: 214 FDWGIKIP----DDPQYIMYVWIDALTNYLTTT---------GYLDNPDGSKAKFWPADL 260
             WG  +P    +D  +  YVW DA+  Y+  T          Y  +PD    +F     
Sbjct: 240 IKWGFPVPLKGFEDKAF--YVWFDAVIGYIGITREWSESQYLNYWKDPDTKLIQF----- 292

Query: 261 HVIGKDILRFHAIYWPAFLLSAN----LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
             +GKD L FH + WP  L+ A     LP   KVF   ++  KG K SKS G  ++    
Sbjct: 293 --MGKDNLEFHTMMWPGILIGAGREYVLPHTIKVFE--YLNAKGVKFSKSKGVGLNMEGA 348

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E +  D  R+ L+  +    D  +  +   + VN  + + IGNLV+R V  I     G+
Sbjct: 349 VELLPSDYWRFALMYLLPETSDTDFSIEEFIEIVNKVMNDKIGNLVNR-VLTIYGANRGI 407

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           I    +  E D + +S    ++ E         +  AL +VI L    +    + +PW+L
Sbjct: 408 I----SGEEDDAASISKARSIISEYIAEFDAINMRNALHKVIELSELGNEVMSSTEPWKL 463

Query: 437 KK---TNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475
            K    N  R  + + V++ +++  L I+L  F P  A+KI D
Sbjct: 464 AKAGDANSKREFSKIMVSLRQIVYDLGIMLWPFAPDAASKILD 506


>gi|222873808|gb|EEF10939.1| predicted protein [Populus trichocarpa]
          Length = 289

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 74/103 (71%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
           R DG DV+F TGTDEHG K+ + A+  G+T     D+N+  F+ MA +L+ S DDFIRTT
Sbjct: 186 RCDGKDVMFLTGTDEHGIKMLQTARKEGITAGELADRNAPEFQRMAKLLNASNDDFIRTT 245

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           E+RH    + +WK ++D+GDIY G YSGWYS+RDEAYY +DE 
Sbjct: 246 EERHRTASQAIWKAMADRGDIYLGGYSGWYSVRDEAYYGEDET 288


>gi|221119548|ref|XP_002161815.1| PREDICTED: similar to MGC69150 protein [Hydra magnipapillata]
          Length = 1410

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 49/514 (9%)

Query: 2    KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
            K+ EK + I++A+ Y N  PH+G+     + ADV AR+ RL  L+VL+  GTDE+G    
Sbjct: 757  KDGEKNILITSALPYVNNVPHLGNIIGCTLSADVYARYCRLRNLNVLYICGTDEYGTATE 816

Query: 60   KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              A + G+T +   D+ ++   ++    +I +D F RTT +      + ++ KI + G +
Sbjct: 817  TKAFSEGLTPQQICDKYNKIHSEIYTWFNIEFDCFGRTTTEHQTKITQDIFWKIENNGYL 876

Query: 120  YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------- 161
             K         + E +  D  V        Y+ A G   +A    +   E          
Sbjct: 877  CKDAVDQLKCEQCERFLADRFVEGICPFCSYEDARGDQCDACGKLINATELKKPRCKQCG 936

Query: 162  -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                    +  F  L   +  L  +     +    +  +N    ++  GLK   ++R   
Sbjct: 937  SSPVIKSSDHIFLDLPKIEPMLKDWIMKSEKANWTVNAKNITRGWIAEGLKPRCITRD-L 995

Query: 215  DWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHVI---GKD 266
             WG  +P +     + YVW DA   Y++ T  Y D  +    K+W  P  + ++    KD
Sbjct: 996  KWGTPVPMEGYTDKVFYVWFDAPIGYISITANYTDQWE----KWWKNPEQVTLVQFMAKD 1051

Query: 267  ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322
             + FH + +P+ LL+A  N  +  ++ +  ++ ++ +K SKS G  +   +  E  G+  
Sbjct: 1052 NVPFHTVVFPSSLLAAKDNYTILNEISATEYLNYENDKFSKSRGVGVFG-DHAESTGIPA 1110

Query: 323  DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            D  R++L+      +D F+  D    + N++L N +GN V+R++  +   ++  +P    
Sbjct: 1111 DMFRFYLLYIRPESQDSFFQWDDFITKNNSELLNNLGNFVNRALMFLKNSFNSTLPNLQL 1170

Query: 383  FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
              E D  +++  +R L +  E++    +   L  ++++    ++Y  A KPW L K +  
Sbjct: 1171 QCE-DYKLIAGINRDLHQYIEHLDAIKLKDGLRCILNMSRLGNQYMQAHKPWVLIKGDEQ 1229

Query: 443  ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               RA+TV+ + V V   +A+L+  ++P ++ ++
Sbjct: 1230 EQMRAATVVGLAVNVSALIAVLILPYMPLVSKQL 1263


>gi|167645711|ref|YP_001683374.1| methionyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083257|sp|B0T3J0|SYM_CAUSK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167348141|gb|ABZ70876.1| methionyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 569

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 217/516 (42%), Gaps = 53/516 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G D L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFQRARGNDTLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+     +S+D F R++  ++H   +   + + ++G I +   
Sbjct: 63  AGQDVAEYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCEVLEERGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--- 173
              YS+ D  +  D  +        +  A G   +   N +   E +  +  +S  +   
Sbjct: 123 QMVYSIDDARFLPDRYIEGTCPHCGFDKARGDQCDNCGNLLDPTELKDPYSVISGSRNLE 182

Query: 174 ---------------DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                          DK+ ++ +SHP++ L    ++     +  GL D  ++R    WGI
Sbjct: 183 VRDTRHLYLLQTKMADKIRAWIDSHPDWQLLA--KSIAYKHLDEGLIDRGITRD-LAWGI 239

Query: 219 KI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW-----PAD----LH 261
            +       P     + YVW DA   Y+  T  + D   G   K W      AD    + 
Sbjct: 240 PVTKGEFPRPGFEDKVFYVWFDAPIEYIAATQEWADEGAGRDWKSWWRTDEGADDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +GKD + FH + +PA +L +  P       K F+  ++   G K S S    +     +
Sbjct: 300 FMGKDNVAFHTVSFPATILGSQEPWKSVDMLKAFN--WLNWYGGKFSTSNKRGVFMDAAL 357

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L        D  +  +     VN DLA+ +GN V+R +      +DG+I
Sbjct: 358 EILPPDFWRWYLTSNAPESSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTEGKFDGVI 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA    +E + +  S  L ++ E M    + ++   + +L    + Y     PW   
Sbjct: 418 PDGGAPGPLEEKLYADVSARLADLTEQMDAVEVRKSAQALRALWVVGNEYLQEAAPWTAI 477

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           KT+ DRA+ ++   + +    A +   F+P  A KI
Sbjct: 478 KTDRDRAAVIVRTALNLAALYARISAPFIPFAAEKI 513


>gi|148692550|gb|EDL24497.1| methionine-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 856

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 227/512 (44%), Gaps = 48/512 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      
Sbjct: 268 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETK 326

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+      D+     IS+D F RTT  +     + +++++  +G + +
Sbjct: 327 AMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLR 386

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------ 161
                    R   +  D  V        Y+ A G   +     +  +E            
Sbjct: 387 DTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSC 446

Query: 162 -----EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                 +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    
Sbjct: 447 PVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 505

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWP----ADLH-VIGKDI 267
           WG  +P +     + YVW DA   Y++ T  Y D  +    K+W      DL+  + KD 
Sbjct: 506 WGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDN 561

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P  +L A  N  L K + +  ++ ++  K SKS G  V   +     +  D 
Sbjct: 562 VPFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADI 621

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T
Sbjct: 622 WRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALT 680

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP 441
             D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    + 
Sbjct: 681 PDDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDR 740

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            RA TV  + V +   L+++LQ ++P +++ I
Sbjct: 741 QRAGTVTGMAVNMAALLSVMLQPYMPTVSSTI 772


>gi|242820726|ref|XP_002487564.1| methionyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218714029|gb|EED13453.1| methionyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 672

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 136/573 (23%), Positives = 238/573 (41%), Gaps = 80/573 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR++R  G   L+  G+DE+G      A   
Sbjct: 16  ILITSALPYVNNVPHLGNIIGSVLPADVFARYNRARGFPTLYICGSDEYGTATETKALEE 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWKK--ISDKGDI 119
           GVT +    +     + + D  +I +D F RT          D  R LW+   I ++   
Sbjct: 76  GVTPEELCAKYHAIHKGIYDWFNIEFDIFGRTPTAHQTKIVQDVFRGLWENGYIEERETT 135

Query: 120 YKGC-------------YSGWYSLRDEAYYNDDEVYK--------------GADGQYYNA 152
              C               G  S+  +     D+  K                DG+  + 
Sbjct: 136 QPYCPVEGHASFLADRFVEGECSICGDPGARGDQCDKCGNLLDPLEPDAKESGDGEEQDV 195

Query: 153 QHNPVQWM---------------EEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEV 196
           +     W+               + +  + RL A +DK++ ++E    E    I   + V
Sbjct: 196 EARATGWLINPRCKLDGATPEKRKTKHLYLRLDALKDKIVPWFEKVSKENDWSINTTSIV 255

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLTTTGYL-- 245
            S++  GLK  +++R    WG+ IP      D+  Y   + YVW DA   Y++ T     
Sbjct: 256 QSWIDRGLKPRAITRD-IKWGVPIPKGIKGLDEEAYKNKVFYVWFDACIGYVSITANYTD 314

Query: 246 -DNPDGSKAKFWPADLHVI------GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFI 296
            DN +G K + W     ++      GKD + FH+I +P   L + +   +  K+ +  ++
Sbjct: 315 GDNLEGKKWEQWWKHPELVSLYQFMGKDNVPFHSIIFPGSQLGSGMTWTQVHKISATEYL 374

Query: 297 LHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            ++G K SKS G  V         VG D  R++L+       D  +  D      N +L 
Sbjct: 375 NYEGGKFSKSKGVGVFGTSAKDTGVGPDIWRFYLLSRRPESSDTEFKWDEFVSTNNNELL 434

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS----VCSRVLQEIRENMQNQLIH 411
             +GNLV+R     +   +G++P   A  E+ +++L+      +  L+     M    + 
Sbjct: 435 KNLGNLVARVTKFCIAKMNGVVPEYSA--EAGKAVLTEHENQVNTHLKSYNTYMDATKMR 492

Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            AL  ++ + S  ++   D +    L    PDR + V+ + +  I  LA +L  F+P+ +
Sbjct: 493 PALNDIMHISSLGNKLLQDNKLDNRLFTEEPDRCAAVINIALNHIHLLASILSPFMPQTS 552

Query: 471 NKIFDILFVADENRCFQS-LDQRLKPGFMLHKT 502
             IF+ L    E R  +  +   LKPG  L ++
Sbjct: 553 KSIFEQLGAVPEARIPEKWVTDALKPGHKLGES 585


>gi|114771637|ref|ZP_01449041.1| methionyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114547709|gb|EAU50599.1| methionyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 570

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/522 (21%), Positives = 218/522 (41%), Gaps = 49/522 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+     + +DV ARF R  G +V+F   TDEHG     AA  
Sbjct: 3   RTLITSALPYINGVKHLGNLIGSQLPSDVYARFCRAKGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++ +++H   +    K+++ G I +   
Sbjct: 63  AGKNVADYCMEMHDVQFELARGFRLSFDHFGRSSSEQNHLLTQYFAGKLAENGLIEEISE 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              YS  D+ Y  D  +            +G   +    Q  P   +             
Sbjct: 123 KQVYSNTDKRYLPDRYIEGECPNCGSPDARGDQCENCTKQLEPTDLINPRSAISGSTDLE 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + + S  ++KL ++ +   ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 VRETKHLYLKQSKMREKLDNWIKQKSDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDDP-------QYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD-------- 259
            +             + YVW DA   Y+  T       + P     ++W  D        
Sbjct: 242 PVKKGAVDWGGMEGKVFYVWFDAPIEYIAATAEWAAKNNKPKEEWERWWRTDKGAENVNY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ A  N  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGADDNWKLVDFIKSFNYLNYDGGQFSTSKGRGVFMNQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           + +  D  R++L+  +    D  +  D  ++ VN DLA+ +GN VSR        +  +I
Sbjct: 362 DILPSDYWRWWLLSNVPESSDSEFTWDSFQQGVNKDLADVLGNFVSRITKFCRSKFGEII 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P    +   + ++++     +     NM    + ++ A + ++ S  + Y     PW L 
Sbjct: 422 PEGNEYGPREFTVINQLEERIASYENNMAKMEVRKSAADLRAIWSIGNEYLQDAAPWTLF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           K +P  ++T++   + +I   A L + F+P   + +   + V
Sbjct: 482 KEDPQSSATIVRFALNLIPLYAALSEPFIPDATDTMVTAMNV 523


>gi|145630903|ref|ZP_01786680.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983563|gb|EDJ91031.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 464

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 144/281 (51%), Gaps = 13/281 (4%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP-- 257
           +S L+   +SR    +G +IP       YVW+DA   Y+ +   L   +G    +FW   
Sbjct: 6   ESSLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEG 65

Query: 258 --ADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
             A+L H IGKDI+ FH+++WPA L  +    P  VF+HG++   G K+SKS G  I   
Sbjct: 66  SDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFTHGYVTVDGAKMSKSRGTFIQAS 125

Query: 315 EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +  +  + LRY+   ++    +D  ++ D   +RVN D+ N + NL SR+   I K +
Sbjct: 126 TYLNHIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRF 185

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +G +    A    DE++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + P
Sbjct: 186 EGKL----ADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAP 241

Query: 434 WELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           W + K     A    V  + +E+ R L   L+  +PKLA +
Sbjct: 242 WVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAER 282


>gi|284172357|ref|NP_001165053.1| methionyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
          Length = 910

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETKAMEE 327

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+     IS+D F RTT  +     + +++++  +G + +    
Sbjct: 328 GLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLRDTVE 387

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 388 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSCPVVR 447

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 448 SSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 506

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFH 271
           +P +     + YVW DA   Y++ T  Y D  +    K+W     V     + KD + FH
Sbjct: 507 VPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDNVPFH 562

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P  +L A  N  L K + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 563 GLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIWRFY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T  D 
Sbjct: 623 LLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALTPDDR 681

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
            +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  RA 
Sbjct: 682 RLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAG 741

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P +++ I
Sbjct: 742 TVTGMAVNMAALLSVMLQPYMPTVSSTI 769


>gi|195120732|ref|XP_002004875.1| GI20156 [Drosophila mojavensis]
 gi|193909943|gb|EDW08810.1| GI20156 [Drosophila mojavensis]
          Length = 1032

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 131/552 (23%), Positives = 236/552 (42%), Gaps = 58/552 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRAAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+       +     I +D F RTT     +  +  +K + + G I      
Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTPEQTEIVQEAFKDVYEAGYILTESVE 375

Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME-------------- 161
                + + +  D  V          Y+ A G   +     V   E              
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNTAPV 435

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F  L   + KL  + +   E       R    ++++ GLK   ++R    WGI
Sbjct: 436 LRSSDQLFLDLPKAEPKLREWVD-RAEQGWTHNARVITRAWLREGLKPRCITRD-LKWGI 493

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIGKDILR 269
            +P     Q + YVW DA   Y++ T           ++W PA          + KD + 
Sbjct: 494 PVPHKNFEQKVFYVWFDAPFGYVSITKRYTK---DYLQWWQPAPGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325
           FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  +E G+  D  
Sbjct: 551 FHSVVWPSVLLAINKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPADVW 609

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L      G+D  +    L  R N++L N +GN V+R++S   +++D  +P       
Sbjct: 610 RFYLASARPEGQDSSFSWTDLAARNNSELLNNLGNFVNRALSFCERNFDSKLPQID-LNH 668

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
           +D  +L++ +R L+    +++   +   +  ++S+    + Y   Q+PW L K + D   
Sbjct: 669 NDFLLLALINRELRGYINSLEKAKMRDGIRHLLSISRHGNGYIQYQQPWALLKGSDDQKT 728

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFM 498
           RA T++ +++ ++  LA LL  F+P  A  +F  L       D N+ F +L   L+PG  
Sbjct: 729 RAGTIIGLSINIVCLLANLLFPFMPTTARAMFAQLNTKQTPLDANKPFATL--LLRPGHK 786

Query: 499 LHKTFDPIFPRF 510
           +  T  P+F + 
Sbjct: 787 IG-TPSPLFNKL 797


>gi|51491852|ref|NP_001003913.1| methionyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|81884328|sp|Q68FL6|SYMC_MOUSE RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51260910|gb|AAH79643.1| Methionine-tRNA synthetase [Mus musculus]
          Length = 902

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETKAMEE 327

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+     IS+D F RTT  +     + +++++  +G + +    
Sbjct: 328 GLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLRDTVE 387

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 388 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSCPVVR 447

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 448 SSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 506

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFH 271
           +P +     + YVW DA   Y++ T  Y D  +    K+W     V     + KD + FH
Sbjct: 507 VPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDNVPFH 562

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P  +L A  N  L K + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 563 GLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIWRFY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T  D 
Sbjct: 623 LLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALTPDDR 681

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
            +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  RA 
Sbjct: 682 RLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAG 741

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P +++ I
Sbjct: 742 TVTGMAVNMAALLSVMLQPYMPTVSSTI 769


>gi|203288026|ref|YP_002223041.1| methionyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|226710895|sp|B5RPT6|SYM_BORRA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|201085246|gb|ACH94820.1| methionyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 726

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 229/512 (44%), Gaps = 57/512 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+ G++ L+  GTDE+G      A 
Sbjct: 2   QKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT K H +T + L+ K+   G I +  
Sbjct: 62  IEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKE 121

Query: 124 YSGWYSLRDEAYYND----------------DEVYKGADGQYYNAQHNPVQWM------- 160
              ++  +D+ +  D                D+    ++    N   NP   +       
Sbjct: 122 NEQFFCQQDQMFLADRYVTGECPNCGNNTKGDQCENCSNLLVTNELLNPRCIICKNIPII 181

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEF----ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            + +  +  L   +++L  + +   +     I  I+  N   +F++ GLK+ +++R    
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNINAIKITN---AFLRDGLKERTITRD-LK 237

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYL---------DNPDGSKAKFWPADLHVIG 264
           WGI +P       + YVW DA   Y++ T  +         +N D +  +F       IG
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQF-------IG 290

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321
           KD + FH I +P+  L +  N  +  K+ S  ++ ++  K SKS G  I   +VI  E+ 
Sbjct: 291 KDNILFHTIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTEIP 350

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R+++        D  +  D   +R+N++L     NL++R ++   K +   I    
Sbjct: 351 SDVWRFYIYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDK-- 408

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E +E+   + +   +      +   +  AL +++ +    ++ F  ++PW+ K + P
Sbjct: 409 --IELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTP 466

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                +L   + +IR L+IL+  F+P  +++I
Sbjct: 467 QTTKELLLNLIYLIRDLSILISPFMPHTSDRI 498


>gi|312147894|gb|ADQ30553.1| methionyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 734

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     +Y
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTMLNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|110667531|ref|YP_657342.1| methionyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689847|sp|Q18JV4|SYM_HALWD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109625278|emb|CAJ51700.1| methionine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 741

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 219/529 (41%), Gaps = 77/529 (14%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D+ +R  +  G +  F +G+D HG  +A  A   GVT
Sbjct: 31  VTCGLPYANGDLHIGHLRTYVGGDIFSRALKRLGQETAFVSGSDMHGTPVAVNAAEEGVT 90

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK------- 121
            + F  ++   +        I +D++  T ++ + +  R + + +   G +Y+       
Sbjct: 91  PESFALRHHEQYETTFPQFGIEFDNYGHTHDETNVEMTREIVEALIQAGYVYEREIPVAY 150

Query: 122 -GCYSGWYSLR--------DEAYYNDDEVYKGADGQYYNAQH----------NPVQWMEE 162
                 W   R          A+   DE  +G  G++               N  ++   
Sbjct: 151 DPAADQWLPDRFVNGTCPYCGAHARGDECDEGC-GRHLEPGEIETPVSTITGNDAEYRRR 209

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E  FF +S  Q  L S+ +           +N+   +V+  L+D  ++R   DWG+  PD
Sbjct: 210 EHQFFAVSELQSYLSSFLD---RLEGTTNAQNQPREWVEGELQDWCITRD-MDWGVDYPD 265

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-------------------------- 256
           D   ++YVW+DA   Y+++T       G+ +  W                          
Sbjct: 266 DNDLVLYVWVDAPIEYISSTKQYAERVGTDSFDWKNAWRDIPGVRSHSSSSAKDSSEGNS 325

Query: 257 PADLHVIGKDIL-------RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
           P++++  G+ I        + H ++WPA L +A    P+ V + GFI  +G+  S S   
Sbjct: 326 PSNINNGGEIIHIIGRDIIQHHTVFWPAMLHAAGYTEPRAVMASGFITLEGKGFSTSRNR 385

Query: 310 VIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            +   E + E    D LRY+L       +D  +     ++RVN +L   +GN + RS+  
Sbjct: 386 AVWADEYLAEGFHPDLLRYYLATNGGFQQDVDFSWSRFRERVNNELVGTVGNFIYRSLLF 445

Query: 369 ILKDYDGMIPTPG-AFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQ-VISLVSEVD 425
             +++DG   TP  A ++S +E I +        +     N+   RA+    + L    +
Sbjct: 446 AAREFDG---TPDVALSDSVEERIETAIDAFTAGV-----NEYSVRAVGDAAVKLAQFGN 497

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y    +PW+L   +P +   V+   +++ + +A+L +   P  A +++
Sbjct: 498 EYIQHHEPWKLSNDDPQK-QQVMRDCIQLAKAIAVLFEPVTPAAAERVW 545


>gi|115481896|ref|NP_001064541.1| Os10g0400100 [Oryza sativa Japonica Group]
 gi|78708564|gb|ABB47539.1| methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113639150|dbj|BAF26455.1| Os10g0400100 [Oryza sativa Japonica Group]
 gi|215695151|dbj|BAG90342.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218184471|gb|EEC66898.1| hypothetical protein OsI_33478 [Oryza sativa Indica Group]
 gi|222612783|gb|EEE50915.1| hypothetical protein OsJ_31437 [Oryza sativa Japonica Group]
          Length = 605

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 234/529 (44%), Gaps = 59/529 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ AD  AR+ RL G +VL+  GTDE+G      A
Sbjct: 14  RRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G + +   D+     +++ +  DIS+D F RT+  +  + C+ ++ K+ D   + + 
Sbjct: 74  MEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWLSEN 133

Query: 123 CYSGWYSLRDEAYYNDD--EVYKGADGQYYNAQH-----------------NPVQWM--- 160
                Y    + +  D   E Y   +G  Y++                   NP   +   
Sbjct: 134 TMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKVCGS 193

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211
                + +  F  L   ++KL  Y +   E  L        I    +++K GLK   ++R
Sbjct: 194 TPCVRDTDHLFLELPLLREKLEKYID---ETSLTGSWSQNAIHATNAWLKEGLKPRCITR 250

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++ +   +GKD
Sbjct: 251 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKD 308

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH + +P+ LL    N  L K +    ++ ++  K SK+      GN      +  E
Sbjct: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375
           V     RY+L+       D  +    L+ + N +L N +GN ++R +S I K     Y  
Sbjct: 369 V----WRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGS 424

Query: 376 MIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           ++P +P   + +  +S+     +++ +  + M    I + L   +++ SE + Y    + 
Sbjct: 425 VVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQF 484

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           W+L K +P   +TV+  +V ++  LA LL+ F+P  +  +   L ++ E
Sbjct: 485 WKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPE 533


>gi|216264496|ref|ZP_03436488.1| methionyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980969|gb|EEC21776.1| methionyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 734

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     +Y
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|15594932|ref|NP_212721.1| methionyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915073|sp|Q44951|SYM_BORBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2688510|gb|AAB91520.1| methionyl-tRNA synthetase (metG) [Borrelia burgdorferi B31]
          Length = 734

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     +Y
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|221218149|ref|ZP_03589615.1| methionyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223889005|ref|ZP_03623596.1| methionyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|225549495|ref|ZP_03770461.1| methionyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192097|gb|EEE18318.1| methionyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223885821|gb|EEF56920.1| methionyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|225369772|gb|EEG99219.1| methionyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 734

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     +Y
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFY 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|148692551|gb|EDL24498.1| methionine-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 916

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 274 VLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATETKAMEE 333

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+     IS+D F RTT  +     + +++++  +G + +    
Sbjct: 334 GLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLRDTVE 393

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 394 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICRSCPVVR 453

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 454 SSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 512

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFH 271
           +P +     + YVW DA   Y++ T  Y D  +    K+W     V     + KD + FH
Sbjct: 513 VPLEGFEDKVFYVWFDATIGYVSITANYTDQWE----KWWKNPEQVDLYQFMAKDNVPFH 568

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P  +L A  N  L K + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 569 GLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIWRFY 628

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T  D 
Sbjct: 629 LLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MALTPDDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
            +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  RA 
Sbjct: 688 RLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAG 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P +++ I
Sbjct: 748 TVTGMAVNMAALLSVMLQPYMPTVSSTI 775


>gi|225552399|ref|ZP_03773339.1| methionyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371397|gb|EEH00827.1| methionyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 734

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     +Y
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLQLEKNGYIKERETEQFY 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|332181112|gb|AEE16800.1| Methionyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 781

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 223/522 (42%), Gaps = 60/522 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I++A+ Y N  PH+G+  +++ ADV ARF R  G D L+  GTDE+G      A     T
Sbjct: 6   ITSALPYVNNIPHLGNLIQVLSADVFARFCRSRGYDTLYVCGTDEYGTATETRALEEKKT 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D       D+     I++D F RT+  +  +  + ++  +   G I +      +
Sbjct: 66  PRELCDYYHAIHADIYKWFGIAFDHFGRTSAAQQTEIVQRMFLDLDKNGFIRENTIEQLF 125

Query: 129 S-----------LRDEAYYNDDEVYKGADGQYYNAQHNPVQWME--------------EE 163
                       +R    +   E  +G   +       PV+                  +
Sbjct: 126 CPDCGRFLADRFVRGTCPHCGYEDARGDQCENCGKLLEPVELKSPRCSTCGGTPHLKSTK 185

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIKI 220
             +  L A Q +  ++ E     +     +N V    ++++ GL + +++R    WGI +
Sbjct: 186 HLYIDLPAIQKRYGAWMEEAS--VKGKWAKNAVQMTQAWIRDGLHERAITRD-LKWGIPV 242

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-------FW------------PAD 259
           P       + YVW DA   Y++ T  L +   +  K       +W            P D
Sbjct: 243 PKTGFEDKVFYVWFDAPIGYISITKALADTLAAHGKDSFDWKSWWLPGESAEAAGKPPVD 302

Query: 260 L-HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEV 316
           L   IGKD + FH + +P+ L+ +     K   + S  ++ ++  K SKS G  +   + 
Sbjct: 303 LFQFIGKDNIPFHTVIFPSTLIGSGRDWTKLYHMSSTEYLNYESGKFSKSKGIGVFGSDA 362

Query: 317 IEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            E  +  DA R+++        D  +     +++ N +L   +GNLV+R+++ + + Y G
Sbjct: 363 KESGIPADAWRFYIFYNRPEKSDTQFLWKDFQEKYNGELIGNLGNLVNRTLTFVSRYYGG 422

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +IP P A    DE + SV      +I E ++   +  A  ++ ++ S  ++ F   +PW+
Sbjct: 423 VIPEPAA----DEQLWSVVRAGESKITELLEWAELKDAFRELFAVSSVANKAFQDGEPWK 478

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + T+P++A++++     VI+ L I+   ++P    K+    
Sbjct: 479 TRNTDPEKAASLIGNLCYVIKDLMIMAHPYLPHYTEKVMSFF 520


>gi|291409351|ref|XP_002720959.1| PREDICTED: methionyl-tRNA synthetase isoform 1 [Oryctolagus
           cuniculus]
          Length = 908

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 223/509 (43%), Gaps = 49/509 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLSRGFVLQDTVE 385

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG------------------QYYNAQHNPVQW 159
                R   +  D  V        Y+ A G                  Q    + +PV  
Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSSPVV- 444

Query: 160 MEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
              +  F  L   +++L  +  ++ P        R  + S+++ GLK   ++R    WG 
Sbjct: 445 KSSQHLFLDLPKLEERLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGT 503

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270
            +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD + F
Sbjct: 504 PVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDNVPF 559

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327
           H + +P   L A  N  L K + +  ++ ++  K SKS G  V   +     +  D  R+
Sbjct: 560 HGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRF 619

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D
Sbjct: 620 YLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLTSDD 678

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444
             +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  RA
Sbjct: 679 RRLLAHVTLELQHYHQLLEKARIRDALRSILTISRHGNQYIQVNEPWKRIKGDEADRQRA 738

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            TV  + V V   L+++LQ ++P ++  I
Sbjct: 739 GTVTGMAVNVAALLSVMLQPYMPTVSASI 767


>gi|291409353|ref|XP_002720960.1| PREDICTED: methionyl-tRNA synthetase isoform 2 [Oryctolagus
           cuniculus]
          Length = 900

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 223/509 (43%), Gaps = 49/509 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLSRGFVLQDTVE 385

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG------------------QYYNAQHNPVQW 159
                R   +  D  V        Y+ A G                  Q    + +PV  
Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSSPVV- 444

Query: 160 MEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
              +  F  L   +++L  +  ++ P        R  + S+++ GLK   ++R    WG 
Sbjct: 445 KSSQHLFLDLPKLEERLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGT 503

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRF 270
            +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD + F
Sbjct: 504 PVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDNVPF 559

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327
           H + +P   L A  N  L K + +  ++ ++  K SKS G  V   +     +  D  R+
Sbjct: 560 HGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRF 619

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D
Sbjct: 620 YLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLTSDD 678

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444
             +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  RA
Sbjct: 679 RRLLAHVTLELQHYHQLLEKARIRDALRSILTISRHGNQYIQVNEPWKRIKGDEADRQRA 738

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            TV  + V V   L+++LQ ++P ++  I
Sbjct: 739 GTVTGMAVNVAALLSVMLQPYMPTVSASI 767


>gi|302537896|ref|ZP_07290238.1| methionyl-tRNA synthetase [Streptomyces sp. C]
 gi|302446791|gb|EFL18607.1| methionyl-tRNA synthetase [Streptomyces sp. C]
          Length = 571

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 222/513 (43%), Gaps = 54/513 (10%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+  G+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKENGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D  ++S+D F R++  ++ +  +   +++   G I +      
Sbjct: 66  PVSEFCAQAHDAQKAVYDGFELSFDYFGRSSSAQNVEITQHFARQLQANGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWME--------------E 162
           YS  D  +  D  V        Y  A G Q  N     +P   +E              E
Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIEPRSAISGSTELEVRE 185

Query: 163 EGYFFRL-SAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             + F L S  Q ++ ++   H    P+    I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQHEVEAWVARHEDEWPQLASSIARK-----WLTEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD----LHV 262
           + +P D  P+      + YVW DA   Y+ +T    + D +    K+ ++ A+       
Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIASTKEWADADPANRDYKSWWYEAEDVRYTQF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + KD + FH + +PA  L    P  +   V +  ++ + G K S S    +   + +E +
Sbjct: 300 MAKDNVPFHTVMFPATELGTREPWKMVDYVKAFNWLTYYGGKFSTSQKRGVFTDQALEIL 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYFL+       D  +  +     VN DL   +GN V+R ++   K +   +P  
Sbjct: 360 PADFWRYFLIANAPESDDSSFTWEHFAATVNKDLGGTLGNFVNRVLTFSRKKFGDEVPAG 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               E++  +    + +L E   +M+     +A A + +L S  + Y D + PW   KT+
Sbjct: 420 NPAGEAESRLGEQIAELLAEYEGHMETLQYRKAAAALRALWSAGNAYLDEKAPWLEVKTD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            D A+  L   + +I   +++ + F+P  A  +
Sbjct: 480 LDAAALTLRTAMNLIHLYSVVSEPFIPASARAM 512


>gi|226321211|ref|ZP_03796746.1| methionyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233379|gb|EEH32125.1| methionyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 708

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKSWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|119953372|ref|YP_945581.1| methionyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782854|sp|A1R019|SYM_BORT9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119862143|gb|AAX17911.1| methionyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 726

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 219/511 (42%), Gaps = 55/511 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+  +D L+  GTDE+G      A 
Sbjct: 2   KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMDIDTLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT K H  T + L+ K+   G I    
Sbjct: 62  IEKTTPEELCNRYYAIHKSIYEWFNIKFDIFGRTTNKSHKQTVQDLFLKLEKNGYITDKE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN----------PVQWMEEEGYFFRLSAYQ 173
              ++  +D+ +  D  V         NA+ +          P+  +  +    +     
Sbjct: 122 SEQFFCQQDQMFLADRYVTGECPNCGNNAKGDQCENCSKLLAPIDLINPKCIICKNIPII 181

Query: 174 DKLLSYYESHPEFILPIERRNEVI---------------------SFVKSGLKDLSLSRK 212
                 Y + P+       +NE+I                     +F++ GLK+ +++R 
Sbjct: 182 KTTKHLYINLPKI------KNELIHWMQTTEHNTNWNTNAIKTTNAFLRDGLKERAITR- 234

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265
              WGI +P       + YVW DA   Y++ T  +     S   +W  +     +  IGK
Sbjct: 235 DLKWGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWES---WWKNNKETNLVQFIGK 291

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +PA  L +  N  +  K+ S  ++ ++  K SKS G  I   +VI   +  
Sbjct: 292 DNILFHTVIFPAIKLGSKENWTMLGKLASSEYLNYEHLKFSKSAGIGIFGNDVITTGISA 351

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R+++        D  +  D   +R+N++L     NLV+R ++   K +   I T   
Sbjct: 352 DIWRFYIYYNRPEKSDFQFMWDDFMERINSELIGNFSNLVNRVLTFYKKFFGDKIDT--- 408

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             E  E      +    +     +   +  AL +++ +    ++ F  ++PW+ K + P 
Sbjct: 409 -IEIKEDFWKEINLKYDKTLNFFKQIELKSALKEILDISRIGNKIFQDKEPWKTKDSTPK 467

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +   +L   + +IR L+IL+  F+P  ++KI
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTSDKI 498


>gi|225548701|ref|ZP_03769748.1| methionyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370731|gb|EEH00167.1| methionyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 734

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAISTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|255261576|ref|ZP_05340918.1| methionyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255103911|gb|EET46585.1| methionyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 570

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 215/515 (41%), Gaps = 47/515 (9%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ ARF R    +VLF   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLFARFQRARRNEVLFLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +      ++A    +S+D F R++   +    +    +++D+G I +   +  
Sbjct: 66  PVAEYCAEMWTLQAEIAQGFRLSFDHFGRSSSDENRTLTQHFAGRLADEGLIEETVETQV 125

Query: 128 YSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------------E 161
           YS+ D  +  D            E  +G        Q +P   +               E
Sbjct: 126 YSIADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPADLINPYSTISGSTELEPRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
            +    + S  +D+L ++  S  ++ +      +       GL+D  ++R   DWG+ + 
Sbjct: 186 TKHLHLKQSKVKDQLDNWISSKKDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGVPVK 244

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSK-AKFWPAD--------LHVIG 264
                 P     + YVW DA   Y+  +  ++    G    ++W  D           +G
Sbjct: 245 RGADDWPGMEGKVFYVWFDAPIEYIACSQEWVAAGKGDDWERWWRTDKGADDVRYTQFMG 304

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA ++ +N P  L   + S  ++ + G + S S G  +   + +E +  
Sbjct: 305 KDNVPFHTLSFPATIMGSNEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEILPS 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   IP  G 
Sbjct: 365 DYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRVTKFTRSKFSEEIPDGGK 424

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
               +ES++   +  ++     M+   I ++  ++ ++    + Y     PW   KT P+
Sbjct: 425 NGPEEESLIQEITTRVRAYEGYMEAMEIRKSANELRAIWVAGNEYLQTVAPWSTFKTAPE 484

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +A+  + + + +IR  A+L   F+P  + ++   +
Sbjct: 485 QAAAQIRLALNLIRVYAVLSAPFIPDASAELMQAM 519


>gi|15236350|ref|NP_193114.1| methionine--tRNA ligase, putative / methionyl-tRNA synthetase,
           putative / MetRS, putative [Arabidopsis thaliana]
 gi|12230648|sp|Q9SVN5|SYM_ARATH RecName: Full=Probable methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4455307|emb|CAB36842.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana]
 gi|7268082|emb|CAB78420.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana]
 gi|17381106|gb|AAL36365.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20259315|gb|AAM14393.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 797

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 225/520 (43%), Gaps = 51/520 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 16  KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+     +++ D   IS+D F RT+     + C+ ++ K+ D   + + 
Sbjct: 76  LEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQAIFNKLWDNKWLSEN 135

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y    + +  D  V      +  N         E+ G     +  +D      ++
Sbjct: 136 TMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQN 195

Query: 183 HPE-------FI-LPI--ERRNEVI------------------SFVKSGLKDLSLSRKTF 214
            P        FI LP+  +R    I                  ++++ GL+   ++R   
Sbjct: 196 TPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAWLRDGLRQRCITRD-L 254

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG+ +P +     + YVW DA   Y++ T    +      K+W  P ++ +   +GKD 
Sbjct: 255 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTS---EWEKWWKNPENVELYQFMGKDN 311

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDA 324
           + FH + +P+  L    N  L K +    ++ ++  K SKS G  +   +V +  + V+ 
Sbjct: 312 VPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVEV 371

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTP 380
            RY+L+       D  +    L+ ++N +L + +GN V+R +S I K     Y  +IP  
Sbjct: 372 WRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDNAGYGSVIPD- 430

Query: 381 GAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               ES     S+  +V   + E  E M+   + + L   + + SE + Y  A + W+L 
Sbjct: 431 AHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYYLQASQFWKLY 490

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K +    + V+     ++  LA LL+ F+P  + ++F  L
Sbjct: 491 KEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQL 530


>gi|312149641|gb|ADQ29712.1| methionyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 734

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +     +  IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSQENWTMLNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|224532738|ref|ZP_03673355.1| methionine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512356|gb|EEF82740.1| methionine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 734

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|226321893|ref|ZP_03797419.1| methionyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226233082|gb|EEH31835.1| methionyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 734

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|126731060|ref|ZP_01746868.1| methionyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126708362|gb|EBA07420.1| methionyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 570

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/526 (22%), Positives = 220/526 (41%), Gaps = 57/526 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +VL+   TDEHG     AA  AG 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLYLCATDEHGTPAELAAAKAGK 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +       +A+   +S+D F R++   +    +   K + ++G I +   +  
Sbjct: 66  PVADYCAEMHEVQAKIAEGFRLSFDHFGRSSSDANKRLTQHFAKVLDEQGLIRETSETQM 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV---------------QWME 161
           YS  D  +  D  +            +G        Q +PV               +  E
Sbjct: 126 YSKADGRFLPDRYIEGTCPNCGFDSARGDQCDNCTKQLDPVDLINPHSTISGSTDLEMRE 185

Query: 162 EEGYFFRLSAYQDKLLSYY---ESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDW 216
            +  + R SA +D+L  +    E  P     I ++  N+       GL+D  ++R   DW
Sbjct: 186 TKHLYLRQSAMKDELEKWIDTREGWPVLTTSIAKKWLND-----GDGLQDRGITRD-LDW 239

Query: 217 GIKI-------PDDPQYIMYVWIDALTNYLTT-TGYLDNPDGSK-AKFWPAD-------- 259
           G+ +       P     + YVW DA   Y+     ++D   G+   ++W  D        
Sbjct: 240 GVPVMKGDQPWPGMEGKVFYVWFDAPIEYIACGQEWVDAGKGTDWERWWRTDKGADDVRY 299

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +P  +L +  P  L   + S  ++ + G + S S G  +   + +
Sbjct: 300 TQFMGKDNVPFHTLSFPVTILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 359

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+  +    D  +  +  +  VN DLA+ +GN  SR        +   +
Sbjct: 360 EILPADYWRWWLLSHVPETSDAEFTWESFQSGVNKDLADVLGNFASRVTKFCRSKFSEAV 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G    ++  +++  +  ++E   +M+   I +A A +       + Y     PW   
Sbjct: 420 PEGGTPGAAEAKLIADLTAKVREYETHMEAIEIRKAAAALRGAWVLGNEYLQEVAPWTTF 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           KT+P++A+  + + + +IR  A++ + F+P     +   +   DE+
Sbjct: 480 KTDPEQAAMQIRLALNLIRLYAVISRPFIPDACADLLAAMQTDDES 525


>gi|224534740|ref|ZP_03675312.1| methionine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513988|gb|EEF84310.1| methionine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 724

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/500 (22%), Positives = 216/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G+  L+  GTDE+G      A      
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIEKTA 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H +  +  + K+   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQEIVQNFFLKLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D  V           KG   +  +   NP+  +  +    +      K   
Sbjct: 127 CNKDSIFLADRYVIGECPECQSTAKGDQCENCSKLLNPIDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVI-------------SFVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N                +F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYIDLPKIKTKLEKWIKNSTTNKNWNTNALKMTNAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DAL  Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GYENKVFYVWFDALIGYISIT---KNIVKNWESWWKNNEQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAISTGIPSDVWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  ++ T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDILETIEIQHKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K + P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILQISSFGNKIFQDNEPWKKKDSAPQETKELILNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|110289054|gb|ABB47540.2| methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 540

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 232/524 (44%), Gaps = 59/524 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ AD  AR+ RL G +VL+  GTDE+G      A
Sbjct: 14  RRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G + +   D+     +++ +  DIS+D F RT+  +  + C+ ++ K+ D   + + 
Sbjct: 74  MEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWLSEN 133

Query: 123 CYSGWYSLRDEAYYNDD--EVYKGADGQYYNAQH-----------------NPVQWM--- 160
                Y    + +  D   E Y   +G  Y++                   NP   +   
Sbjct: 134 TMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKVCGS 193

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211
                + +  F  L   ++KL  Y +   E  L        I    +++K GLK   ++R
Sbjct: 194 TPCVRDTDHLFLELPLLREKLEKYID---ETSLTGSWSQNAIHATNAWLKEGLKPRCITR 250

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++ +   +GKD
Sbjct: 251 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFMGKD 308

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH + +P+ LL    N  L K +    ++ ++  K SK+      GN      +  E
Sbjct: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375
           V     RY+L+       D  +    L+ + N +L N +GN ++R +S I K     Y  
Sbjct: 369 V----WRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGS 424

Query: 376 MIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           ++P +P   + +  +S+     +++ +  + M    I + L   +++ SE + Y    + 
Sbjct: 425 VVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQF 484

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           W+L K +P   +TV+  +V ++  LA LL+ F+P  +  +  +L
Sbjct: 485 WKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVCLLL 528


>gi|224533669|ref|ZP_03674258.1| methionyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513342|gb|EEF83704.1| methionyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 734

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|224055851|ref|XP_002298685.1| predicted protein [Populus trichocarpa]
 gi|222845943|gb|EEE83490.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 247/563 (43%), Gaps = 63/563 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 16  KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+     R++    +IS+D+F RT+  +  + C+ ++KK+ +   + + 
Sbjct: 76  MEENSTPKQICDKYYAIHREVYKWFNISFDEFGRTSSPQQTEICQAIFKKLLENNWLSEN 135

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-QYYNAQH--NPVQWM--------- 160
                Y    E +  D  V          Y  A G Q  N     NP + +         
Sbjct: 136 SMQQLYCDTCERFLADRLVEGNCPTEGCNYDSARGDQCENCGKLLNPTELINPRCKQCKN 195

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRK 212
                +    F  L   +DKL+ Y ES    +     +N + +   ++K GLK   ++R 
Sbjct: 196 TPRIRDTNHLFLELPLLKDKLVHYIESTS--VAGGWSQNAIQTTNAWLKEGLKPRCITRD 253

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDI 267
              WG+ +P +     + YVW DA   Y++ T     PD  K    P ++ +   +GKD 
Sbjct: 254 -LKWGVPVPLEEFKDKVFYVWFDAPIGYVSITSCY-TPDWEKWWKNPENVELYQFMGKDN 311

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P+ LL    N  L K +    ++ ++  K SKS G  V         + V+ 
Sbjct: 312 VPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVEV 371

Query: 325 LRYFLVRE-----IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDG 375
            RY+L+       +    D  +    L+ + N +L N +GN ++R +S + K     Y  
Sbjct: 372 WRYYLLTNRPEAILLKVSDTLFTWSDLQAKSNNELLNNLGNFINRVLSFLAKPPGSGYGS 431

Query: 376 MIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +IP  PGA +      +     + +++  E M+   +   L   +S+ SE + Y    + 
Sbjct: 432 VIPDAPGAGSHPLTNKLAEEVGKYVEQYLEAMEKVKLKHGLKTAMSISSEGNAYLQESQF 491

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF----QSL 489
           W L K +    S V+  ++ ++  LA LL+ F+P  + ++F  L +  E          +
Sbjct: 492 WRLYKEDQPSCSIVIKTSLGLVYLLACLLEPFMPSFSVEVFKQLNMPPEQASLCDEKGDM 551

Query: 490 DQRLKPGFML---HK--TFDPIF 507
           D+  +P  +L   HK  T +P+F
Sbjct: 552 DKAKRPWEILPAGHKIGTPEPLF 574


>gi|312074907|ref|XP_003140180.1| hypothetical protein LOAG_04595 [Loa loa]
 gi|307764654|gb|EFO23888.1| hypothetical protein LOAG_04595 [Loa loa]
          Length = 583

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 231/516 (44%), Gaps = 50/516 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ AD  +R+  L G   LF  GTDE+G    + A 
Sbjct: 7   KNILITSALPYVNNVPHLGNIIGCVLSADAFSRYCYLKGWRRLFICGTDEYGTATERKAV 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+       +    +I +D F RTT +   +  + ++ K+   G      
Sbjct: 67  QEGLTPRQICDKYHAIHAKIYKWFNIDFDRFGRTTTQHQTELTQEIFLKLHKNGFTSTDV 126

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KG----ADGQYYNAQH--NPVQWMEEEGYF 166
               +      +  D  V+           +G    A G+  NA    NP   + +    
Sbjct: 127 VDQLHCDNCNRFLADRFVFGECPYCHFDDARGDQCDACGKLINAVEIINPRCDLCKATPV 186

Query: 167 FRLSAY----QDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSRKT----FD 215
            + S++     DKL    E H    L   + +     IS  KS LK   L R+       
Sbjct: 187 VKPSSHIFLHLDKLAGEVEKHLNKQLSSGKNHWSANAISIAKSWLKG-GLERRCITRDLK 245

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLH-VIGKDI--- 267
           WG+ +P D     + YVW DA   YL+ T      D S+    P+  DL+  +GK I   
Sbjct: 246 WGVPVPIDSFSNKVFYVWFDAPIGYLSITKEYLGEDWSQWWKNPSIVDLYNFVGKTIFPF 305

Query: 268 ---LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
              + FHA+ +PA  +    N  +  ++ +  ++ ++  K SKS G  +   ++  E G+
Sbjct: 306 HDNVAFHAVMFPATQIGTGDNYTMVNRLCATEYLNYESTKFSKSRGTGVFG-DMAAETGI 364

Query: 323 DA--LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DA   R++L+      +D  +  D    +VN +L N +GN V+R++  + K ++G++P  
Sbjct: 365 DADIWRFYLLYIRPETQDTSFSWDDFSLKVNTELLNNLGNFVNRALMFLSKYFNGVVPDM 424

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               E D+++L+  +  L +    + +  +   + +V+S+    + Y  + +PW L K N
Sbjct: 425 -YLEEEDKALLAQVASDLNDFDSCLSSVKLRDGIVKVLSISRHGNLYMQSTQPWVLLKGN 483

Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   RA TV+ V   +   +A+++  ++P ++ KI
Sbjct: 484 ENDRRRAGTVIGVVANLTYLIAVMIYPYMPSISEKI 519


>gi|168032815|ref|XP_001768913.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679825|gb|EDQ66267.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 811

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 132/566 (23%), Positives = 248/566 (43%), Gaps = 73/566 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + +++A+ Y N  PH+G+    ++ ADV AR+ R  G +V++  GTDE+G      A
Sbjct: 24  KRNIMVTSALPYVNNVPHLGNIIGCVLSADVYARYCRRRGYNVIYMCGTDEYGTATETRA 83

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +   D+     RD+ +  DI +D F RT+  +  +  + ++  + +K  + + 
Sbjct: 84  MEEGLTPREICDKYHAIHRDIYEWFDIDFDKFGRTSTPQQTEIAQAIFMSLYEKKRLNEN 143

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADG-------QYYNAQH----------N 155
                Y      +  D  V          Y+ A G       +  NA            N
Sbjct: 144 TMIQPYCTTCNRFLADRLVEGTCPTPGCGYEDARGDQCDLCGKLLNADDLINPRCKVCGN 203

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPE----FILPIERRNEVISFVKSGLKDLSLSR 211
             +    +  F  L    D+L SY  +  +        I++ N   ++++ GLK+  ++R
Sbjct: 204 TPEKRPTDHLFLDLPGLNDQLQSYINNTSKRGGWSSNSIQQTN---AWIRDGLKERCITR 260

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---G 264
               WG+ +P +     + YVW DA   Y++ T    N      K+W  P D+ ++   G
Sbjct: 261 D-LKWGVPVPLEKYKHKVFYVWFDAPIGYISITA---NYSPEWEKWWKSPEDVELVQFMG 316

Query: 265 KDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321
           KD + FH + +P+ LL    P  L K +    ++ ++  K SKS G  +   +V    + 
Sbjct: 317 KDNVPFHTVIFPSTLLGTEEPWTLMKTISVTEYLNYESGKFSKSRGVGVFGNDVKSTNIP 376

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----DYDGM 376
           V+  RY+L+       D  +    L+ + N +L   +GN V R++S + K      +  +
Sbjct: 377 VEVWRYYLLTNRPEVSDTLFTWVDLQAKQNNELLKNLGNFVHRTLSFLAKPLGEGGFGKV 436

Query: 377 IPTPGAFTESDES---ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +P  G   E + +    + V S V + I+ +M+   +   L   + + S  ++Y    + 
Sbjct: 437 VPEVGNPEEHELTRNLAIKVKSTVDEYIK-SMEAVKLKGGLKAAMQVSSLGNQYLQDSQF 495

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-------DILFVADENRCF 486
           W+L K +    + VL  +V ++  LA LL+ F+P  ++K+          L + +EN   
Sbjct: 496 WKLYKEDKPSCAIVLKTSVGLVHLLATLLEPFMPSFSHKVLAQLNLPVSTLSLVEEN--- 552

Query: 487 QSLDQRLKPGFMLHK-----TFDPIF 507
             L++  KP  ++       + +PIF
Sbjct: 553 DELERAYKPWMLVQSGHSIGSPEPIF 578


>gi|222873365|gb|EEF10496.1| predicted protein [Populus trichocarpa]
          Length = 371

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 167/364 (45%), Gaps = 46/364 (12%)

Query: 52  DEHGQKIAKAAQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
           D HG  I   A   GV   ++  D   ++  D +   +IS+D++  T    + +    ++
Sbjct: 1   DAHGTPIMLKADQMGVKPEQLIADVQQKHMADFSG-FNISFDNYHSTHSDENRELVEAIY 59

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQ 158
            K+   G I     S  +   ++A +  D   KG      A+ QY       +A ++P++
Sbjct: 60  HKLKQNGFIKTRIISQLFD-PEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIE 118

Query: 159 WM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +              E E +FF L A++  L  +  S     L  E  N++  + ++GL
Sbjct: 119 LISPRSTVSGATPVLKESEHFFFDLPAFESMLTEWIRSGS---LQQEVANKMQEWFEAGL 175

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPAD 259
           +   +SR    +G KIP+      YVW+DA   Y+ +     N  G K+      FW  +
Sbjct: 176 QQWDISRDAPYFGFKIPNTDNKYFYVWLDAPIGYMAS---FKNLCGKKSGIDFDSFWSKE 232

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDI+ FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I   
Sbjct: 233 SHAELYHFIGKDIMYFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAA 292

Query: 315 EVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++ +  + LRY+   ++     D   + D   +RVN DL N + NL SR+ S I K +
Sbjct: 293 TYLKYLDPECLRYYYAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRF 352

Query: 374 DGMI 377
           DG +
Sbjct: 353 DGKL 356


>gi|323651384|gb|ADX97538.1| methionyl-tRNA synthetase [Terra1 virus]
          Length = 546

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 225/514 (43%), Gaps = 65/514 (12%)

Query: 6   KLYISTAIAYPN-AQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K +I++A+ YPN A PH+G+    +++ DV ARF R    +V++ +GTDE+G      A+
Sbjct: 2   KYFITSALPYPNNASPHLGNLIGALLSGDVYARFKREQHHEVIYLSGTDEYGTTTMIKAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+     + + D  +I +D F RT+ ++  +    ++  +   G I +  
Sbjct: 62  QEGVTCRELCDKYFELHKKVYDWFNIQFDIFGRTSTEKQTEITHEIFTGLYHNGFIEEKN 121

Query: 124 YSGWYSLRDEAYYNDDEV-----YKGADG--------QYYNAQH--------NPVQWMEE 162
            +  Y    + Y  D  V     Y    G        Q    QH        NP   + +
Sbjct: 122 STQMYCDTCQLYLADTYVKGTCYYDYCQGKNIITNGDQCEICQHMIEVTKLINPFCSICK 181

Query: 163 EGYFFR----LSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWG 217
                R    L    DKL +  E++ +        N V  +++ +GL    ++R    WG
Sbjct: 182 TTPVIRNTQHLYLQLDKLTNQIENYLDKTNFKSSVNSVAKAWLNTGLTSRCITRD-LSWG 240

Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKD 266
             IP+            + YVW DA   Y +    L N      ++  +D++ I   GKD
Sbjct: 241 TPIPNGIDDVIDKYSDKVFYVWFDAPIGYYSI---LANAKPDWREWLNSDVNWISTQGKD 297

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH I +PA +L +   LPL  ++ S  ++L++GEK SKS      G+ +  I    +
Sbjct: 298 NIPFHTIMFPASILGSGVKLPLINEICSTDYLLYEGEKFSKSNNCGLFGDQVMKISSELD 357

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L++     +D  ++       + +DL N IGNL++R  S++ K        
Sbjct: 358 ITEDYWRFYLMKIRPETQDSSFNLKDFVTCIKSDLVNNIGNLINRYFSLVKK-------- 409

Query: 380 PGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                + +E  + +   +++ I E    M N     AL   + +    ++Y    +PW+L
Sbjct: 410 ----LDINEFTVDIPVDIIEYITEYVDLMNNFKFREALKLCLKISDYGNKYIQTNRPWKL 465

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             T+   A  VL +   +   L  LL+ F+PK +
Sbjct: 466 LSTDIKTAEHVLSIAGMICWILLSLLKPFIPKTS 499


>gi|208780529|ref|ZP_03247869.1| methionyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743675|gb|EDZ89979.1| methionyl-tRNA synthetase [Francisella novicida FTG]
          Length = 619

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 49/460 (10%)

Query: 62  AQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A++ G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I 
Sbjct: 4   AKSLGITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 62

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------- 161
           K   +  Y    + +  D  V KG      A+ QY        A ++P + +        
Sbjct: 63  KKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISG 121

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR   
Sbjct: 122 QSPIQKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAP 179

Query: 215 DWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFW-----PADL-HVIGKD 266
            +G  IP  + Q   YVW+DA   Y+ +   Y +  + +   FW      ++L H IGKD
Sbjct: 180 YFGFAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKD 239

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LR
Sbjct: 240 IIYFHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLR 299

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+    +    D    + +    + N+D+   + N+ SR    I K +D  + +   F  
Sbjct: 300 YYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF-- 356

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
            D+ + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +
Sbjct: 357 -DQELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQK 415

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
              V    + + + L   L+  +P +   A +  +I F++
Sbjct: 416 VHQVCSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 455


>gi|323651382|gb|ADX97537.1| methionyl-tRNA synthetase [Courdo11 virus]
          Length = 546

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 223/514 (43%), Gaps = 65/514 (12%)

Query: 6   KLYISTAIAYPN-AQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K +I++A+ YPN A PH+G+    +++ DV ARF R    +V++ +GTDE+G      A+
Sbjct: 2   KYFITSALPYPNNASPHLGNLIGALLSGDVYARFKREQHHEVIYLSGTDEYGTTTMIKAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+     + + D  +I +D F RT+ ++  +    ++  +   G I +  
Sbjct: 62  QEGVTCRELCDKYFELHKKVYDWFNIQFDIFGRTSTEKQTEITHEIFTGLYHNGFIEEKN 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYN-------------AQH--------NPVQWMEE 162
            +  Y    + Y  D  V       Y                QH        NP   + +
Sbjct: 122 STQMYCDTCQLYLADTYVKGTCYHDYCQGKNIITNGDQCEICQHMIEVTKLINPFCSICK 181

Query: 163 EGYFFR----LSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWG 217
                R    L    DKL +  E++ +        N V  +++ +GL    ++R    WG
Sbjct: 182 TTPVIRNTQHLYLQLDKLTNQIENYLDKTNFKSSVNSVAKAWLNTGLTSRCITRD-LSWG 240

Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKD 266
             IP+            + YVW DA   Y +    L N      ++  +D++ I   GKD
Sbjct: 241 TPIPNGIDDVIDKYSDKVFYVWFDAPIGYYSI---LANAKPDWREWLNSDVNWISTQGKD 297

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH I +PA +L +   LPL  ++ S  ++L++GEK SKS      G+ +  I    +
Sbjct: 298 NIPFHTIMFPASILGSGVKLPLINEICSTDYLLYEGEKFSKSNNCGLFGDQVMKISSELD 357

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L++     +D  ++       + +DL N IGNL++R  S++ K        
Sbjct: 358 ITEDYWRFYLMKIRPETQDSSFNLKDFVTCIKSDLVNNIGNLINRYFSLVKK-------- 409

Query: 380 PGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                + +E  + +   +++ I E    M N     AL   + +    ++Y    +PW+L
Sbjct: 410 ----LDVNEFTVDIPVDIIEYITEYVDLMNNFKFREALKLCLKISDYGNKYIQTNRPWKL 465

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             T+   A  VL +   +   L  LL+ F+PK +
Sbjct: 466 LSTDIKTAEHVLSIAGMICWILLSLLKPFIPKTS 499


>gi|307204861|gb|EFN83419.1| Methionyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 831

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 234/524 (44%), Gaps = 50/524 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+  GTDE+G     
Sbjct: 253 KGERNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYICGTDEYGTATEA 312

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+     I +D F RTT     +  +  + KI  +G I 
Sbjct: 313 KALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQSFFLKIKSQGYIL 372

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQ----------HNPVQWMEEEG----- 164
                  +    + +  D  V     G +Y +A+           N V+ +E        
Sbjct: 373 NETVEQLHCELCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLMNAVELVEPRCKICNT 432

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213
                    +F  L   +D+L  + ++  +    + +   V+S  +++ GLK   ++R  
Sbjct: 433 KPVVKNSVQFFLDLPKIEDRLKQWSDTVSKGWSSVAK---VVSKSWLRDGLKPRCITRD- 488

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV-----IGK 265
             WGI +P +     + YVW DA   Y++ T           K+W P D  V     + K
Sbjct: 489 LKWGIPVPVNGFENKVFYVWFDAPFGYISITKRYTK---EYEKWWKPQDTKVDLCQFMAK 545

Query: 266 DILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FHAI +PA LL+AN    L K + +  ++ ++ +K SKS    +   +  +  +  
Sbjct: 546 DNVPFHAIMFPACLLAANQNNTLIKYLMATEYLNYEDKKFSKSRSVGVFGTDARDTGIPA 605

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L       +D  ++   L  + N++L N +GN V+R++    K +D  +P P  
Sbjct: 606 DVWRFYLAYIRPETQDSNFNWIDLATKNNSELLNNLGNFVNRALMFSEKFFDCNVP-PTK 664

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNP 441
             E+D ++L++  R L      M+   +   L  ++++    ++Y   Q+PW ++K T+ 
Sbjct: 665 LEEADWTVLALAQRELTSYINAMEQAKLRDGLKHILAISKHGNQYMQFQQPWVKIKGTDD 724

Query: 442 D--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           D  RA TV+ +   +   L+ LL  F+P  A ++   L ++++N
Sbjct: 725 DKNRAGTVVAICCNLACLLSALLAPFMPATAKQLRSQLGLSNKN 768


>gi|290447949|emb|CBK19452.1| C. elegans protein F58B3.5b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 676

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 215/510 (42%), Gaps = 42/510 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      A
Sbjct: 34  KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G T +   D+     + + +   I +  F RTT     + C+ ++ K+   G     
Sbjct: 94  LQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSSQ 153

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRLSA 171
                Y  + E +  D  V        Y  A G   +      N V   + + +  + + 
Sbjct: 154 SVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKATP 213

Query: 172 ----------YQDKLLSYYESHPEFILPIE----RRNEV---ISFVKSGLKDLSLSRKTF 214
                       DKL      H +  L  E      N V    +++K GL    ++R   
Sbjct: 214 EVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRCITRD-L 272

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269
            WG  +P D   + + YVW DA   YL+ T  +   + +K    P ++ +   +GKD + 
Sbjct: 273 KWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFVGKDNVA 332

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALR 326
           FHA+ +P   L AN    +   + +  ++ ++  K SKS G  +        E+  D  R
Sbjct: 333 FHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTEIPADIWR 392

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+      +D  +  D    +VN++L N +GN ++R++S +   + G++P     T  
Sbjct: 393 FYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMN-LTND 451

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D  +LS       +  +      +  A+  ++++    ++Y  AQ PW L K + +   R
Sbjct: 452 DAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPWVLMKKDEEGKKR 511

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           A T++ V   +   +++LL   +P ++  I
Sbjct: 512 AGTIIGVAANIAYHVSVLLYPIMPTISATI 541


>gi|49619159|gb|AAT68164.1| methionine-tRNA synthetase [Danio rerio]
          Length = 913

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 222/511 (43%), Gaps = 47/511 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G ++L+  GTDE+G      A
Sbjct: 261 KRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKA 320

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+       +     I +D F RTT +   +  + ++ ++ ++G + + 
Sbjct: 321 REEGLTPQQICDKYRCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLED 380

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------- 161
                     + +  D  V        Y  A G   +    P+  +E             
Sbjct: 381 TVEQLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCGRPINAVELKNPQCKVCKETP 440

Query: 162 ----EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                +  F  L   +  L  + + S          R+   S+++ GLK   ++R    W
Sbjct: 441 VIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD-LKW 499

Query: 217 GIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDIL 268
           G  +P  D  + + YVW DA   YL+ T  Y D  +    ++W     V     + KD +
Sbjct: 500 GTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWE----RWWKNPQQVELYNFMAKDNV 555

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325
            FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  V   +     +  D  
Sbjct: 556 PFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVW 615

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K ++G +P      +
Sbjct: 616 RFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFEGCVPEMLLNDD 675

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
               I  VC  + Q I + +    I  AL  ++++    ++Y    +PW+  K   +   
Sbjct: 676 DKRLIAQVCWELKQYI-QLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAEDRC 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           RA TV  V+V V   LA +L+ F+P ++  I
Sbjct: 735 RAGTVTGVSVNVACLLAAVLEPFMPTVSLSI 765


>gi|290958910|ref|YP_003490092.1| methionyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648436|emb|CBG71547.1| putative methionyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 577

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 232/544 (42%), Gaps = 60/544 (11%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+  G+
Sbjct: 6   ITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERGL 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               F  Q     + + D   +++D F R++  ++ +  +   +++ + G I +      
Sbjct: 66  PVDEFCAQAHDAQKAVYDGFALAFDYFGRSSSPQNVEITQHFARRLKENGFIEERAIRQV 125

Query: 128 YSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWM---------------E 161
           YS  D  +  D  V        Y  A G Q  N     +P   +               E
Sbjct: 126 YSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTDLEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            +  F   S  Q ++ ++  +H    P     I R+     ++  GL D +++R   DWG
Sbjct: 186 TKHLFLLQSKLQHEVEAWVAAHEEEWPHLSSSIARK-----WLNEGLHDRAITRD-LDWG 239

Query: 218 IKIPDD--PQY-----IMYVWIDALTNYLTTTGYLDN--PDGS----KAKFWPAD----- 259
           + +P D  P+      + YVW DA   Y+  T    +  PDG     K+ ++ AD     
Sbjct: 240 VPVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDAAPDGEKRDWKSWWYEADGGDHP 299

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPI 314
                 + KD + FH + +PA  L    P  K   V S  ++ + G K S S    +   
Sbjct: 300 VRYTQFMAKDNVPFHTVMFPATELGIREPWKKVDYVKSFNWLTYYGGKFSTSQKRGVFTD 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K + 
Sbjct: 360 QALEILPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFG 419

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             +P   A  E++  +    +R+L E    M+     +A A + +L S  + Y + + PW
Sbjct: 420 DEVPAGAAAGEAETRLGEEIARLLAEYEAQMEALQFRKAAAALRALWSAGNSYLEEKAPW 479

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
              KT+ D A+  L   + +I   +++ + F+P  +  +     + D+   + + ++   
Sbjct: 480 LEIKTDQDAAALTLRTAMNLIHLYSVVSEPFIPASSAAMRAAFALKDDTAAWVTAEEARA 539

Query: 495 PGFM 498
             F+
Sbjct: 540 LAFV 543


>gi|301761326|ref|XP_002916060.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 900

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPVVK 445

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 446 SSRHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271
           +P +     + YVW DA   YL+ T  Y D  +    ++W  P  +++   + KD + FH
Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 561 GLVFPCSALGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D 
Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445
            +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D  RA 
Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P +   I
Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVGGTI 767


>gi|149914331|ref|ZP_01902862.1| methionyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811850|gb|EDM71683.1| methionyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 572

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/523 (21%), Positives = 215/523 (41%), Gaps = 53/523 (10%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA   G 
Sbjct: 6   ITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAELAAAKTGE 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               +  +  +   D+A+   +S+D F R++  ++H   +    ++   G I +      
Sbjct: 66  PVSEYCARMHKVQSDLAEGFRLSFDHFGRSSSPQNHSLTQHFAGRLHAAGLIEEVTEKQV 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM---------------E 161
           YS  D  +  D  +            +G   +    Q +P   +               E
Sbjct: 126 YSKADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDLEVRE 185

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIK 219
               + R S  +D+L  + +S  ++  PI   +    ++  G  L+D  ++R   DWGI 
Sbjct: 186 TTHLYLRQSLMRDQLSDWIDSKSDW--PILTTSIARKWLNDGDGLQDRGITRD-LDWGIP 242

Query: 220 I-------PDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPAD--------L 260
           +       P     + YVW DA   Y+             D +  ++W  +         
Sbjct: 243 VKRGDEDWPGMDGKVFYVWFDAPIEYIACAAEWAEAHSLDDSAWERWWRTERGAEDVRYT 302

Query: 261 HVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA +L +  +  L   + S  ++ + G + S S G  +   + +E
Sbjct: 303 QFMGKDNVPFHTLSFPATILGSGEDWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQALE 362

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +P
Sbjct: 363 ILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRVTKFCRSKFGEAVP 422

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G     + +++      ++  + +M    + +A  ++ ++    + Y     PW   K
Sbjct: 423 DGGEMRARERALIDDLGDRIRTYQAHMDAIEVRKASQELRAIWVAGNEYLQEAAPWSTYK 482

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +P++A+  + + + +IR  A+L   F+P  +  +   +   D
Sbjct: 483 EDPEQAAAQIRLALNLIRLYAVLSAPFIPDASESMLTAMHTTD 525


>gi|281353298|gb|EFB28882.1| hypothetical protein PANDA_004122 [Ailuropoda melanoleuca]
          Length = 864

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 230 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 289

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 290 GLTPQEICDKYHAIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 349

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 350 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPVVK 409

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 410 SSRHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 468

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271
           +P +     + YVW DA   YL+ T  Y D  +    ++W  P  +++   + KD + FH
Sbjct: 469 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 524

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 525 GLVFPCSALGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D 
Sbjct: 585 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 643

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445
            +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D  RA 
Sbjct: 644 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 703

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P +   I
Sbjct: 704 TVTGLAVNIAALLSVMLQPYMPTVGGTI 731


>gi|218249303|ref|YP_002375095.1| methionyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226695276|sp|B7J2F0|SYM_BORBZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218164491|gb|ACK74552.1| methionyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 734

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 214/500 (42%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G+  L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|195941720|ref|ZP_03087102.1| methionyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 734

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/500 (22%), Positives = 215/500 (43%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIENTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H D  +  + ++   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP   +  +    +      K   
Sbjct: 127 CNKDLMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER--RNEVIS-------------FVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+  +N   S             F++ GLK+ +++R    WGI +P  
Sbjct: 187 LYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +     +  IGKD + FH I +P
Sbjct: 246 GFENKVFYVWFDAPIGYISIT---KNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I   
Sbjct: 363 PEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K  +P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|203284492|ref|YP_002222232.1| methionyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|226710893|sp|B5RME0|SYM_BORDL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|201083935|gb|ACH93526.1| methionyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 726

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/509 (22%), Positives = 226/509 (44%), Gaps = 51/509 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+ G++ L+  GTDE+G      A 
Sbjct: 2   KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT K H +T + L+ K+   G I +  
Sbjct: 62  IEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKE 121

Query: 124 YSGWYSLRDEAYYND----------------DEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
              ++  +D+ +  D                D+    ++    N   NP   + +     
Sbjct: 122 NEQFFCQQDKMFLADRYVTGECPNCGNNTKGDQCENCSNLLVTNELLNPRCIICKNIPII 181

Query: 168 RLSAYQDKLLSYYESHPE-FILPIERRNE--------VISFVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E +I  I++             +F++ GLK+ +++R    WGI
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNTNAIKITNAFLRDGLKERTITRD-LKWGI 240

Query: 219 KIPDDP--QYIMYVWIDALTNYLTTTGYL---------DNPDGSKAKFWPADLHVIGKDI 267
            +P       + YVW DA   Y++ T  +         +N D +  +F       IGKD 
Sbjct: 241 PVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQF-------IGKDN 293

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FH I +P+  L +  N  +  K+ S  ++ ++  K SKS G  I   +VI   +  D 
Sbjct: 294 ILFHTIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDV 353

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R+++        D  +  D   +R+N++L     NL++R ++   K +   I       
Sbjct: 354 WRFYIYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDK----I 409

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E +E+   + +   +      +   +  AL +++ +    ++ F  ++PW+ K + P   
Sbjct: 410 ELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTT 469

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +L   + +IR L+IL+  F+P  +++I
Sbjct: 470 KELLLNLIYLIRDLSILISPFMPHTSDRI 498


>gi|328676534|gb|AEB27404.1| Methionyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 619

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 205/460 (44%), Gaps = 49/460 (10%)

Query: 62  AQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A++ G+T +  V + S R+ +D  D  +I++D++  T    + +    ++ K+++K  I 
Sbjct: 4   AKSLGITPEELVTKYSNRHLQDFTD-FEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 62

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWME------- 161
           K   +  Y    + +  D  V KG      A+ QY        A ++P + +        
Sbjct: 63  KKAIAQAYDPEAKMFLPDRFV-KGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISG 121

Query: 162 -------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   E +FF L A +  +  + ES+   +L  E  N++  + + GL+   +SR   
Sbjct: 122 QSPIQKNSEHFFFDLPALEKNIKDWIESNT--LLQPEVANKLAEWFEQGLQSWDISRDAP 179

Query: 215 DWGIKIP-DDPQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD------LHVIGKD 266
            +G  IP  + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKD
Sbjct: 180 YFGFAIPATNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGNSSSESELYHFIGKD 239

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LR
Sbjct: 240 IIYFHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLR 299

Query: 327 YFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+    +    D    + +    + N+D+   + N+ SR    I K +D  + +   F  
Sbjct: 300 YYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL-SGEIF-- 356

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
            D  + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +
Sbjct: 357 -DPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQK 415

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKL---ANKIFDILFVA 480
              V    + + + L   L+  +P +   A +  +I F++
Sbjct: 416 VHQVCSQGINMFKVLIAYLKPIIPSIVAEAERFLNIQFIS 455


>gi|84000155|ref|NP_001033180.1| methionyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110816437|sp|Q2T9L8|SYMC_BOVIN RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83405370|gb|AAI11363.1| Methionyl-tRNA synthetase [Bos taurus]
          Length = 898

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 228/516 (44%), Gaps = 63/516 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-----IERRNEVISFVKSGLKDLSLSR 211
           V     +  F  L     KL +  E   E  LP        R  + S+++ GLK   ++R
Sbjct: 443 VV-KSSQHLFLDLP----KLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCITR 497

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---I 263
               WG  +P +     + YVW DA   YL+ T  Y D  +    K+W  P  +++   +
Sbjct: 498 D-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----KWWKNPEQVNLYQFM 552

Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320
            KD + FH I +P+  L A  N  L   + +  ++ ++  K SKS G  V   +     +
Sbjct: 553 AKDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 612

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P  
Sbjct: 613 PADIWRFYLLYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFVPE- 671

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438
              T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K  
Sbjct: 672 MVLTSDDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGG 731

Query: 439 -TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 732 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|324502781|gb|ADY41221.1| Methionyl-tRNA synthetase [Ascaris suum]
          Length = 930

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 230/524 (43%), Gaps = 49/524 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K  + + +++A+ Y N  PH+G+    ++ ADV +R+ RL G   L+  GTDE+G    
Sbjct: 26  VKGEKNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYCRLKGWRCLYVCGTDEYGTATE 85

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D      + + +  +I +D F RTT     +  + L+ K+   G  
Sbjct: 86  MKAMQEGLTPQQICDHYYNIHKSIYEWFNIDFDRFGRTTNPHQIELTQDLFLKLHSNGYT 145

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------NPVQWMEEEGYFF- 167
                   +  + + +  D  V+      +++              N V+ ++   +   
Sbjct: 146 STDTVDQLHCSKCQRFLADRFVHGECPNCHFDDARGDQCDACSKLINAVELIKPRCHICG 205

Query: 168 ---------RLSAYQDKLLSYYESHPEFILPIERR---NEVI---SFVKSGLKDLSLSRK 212
                     L  + DKL +  E H    L        N +    S++K GL+   ++R 
Sbjct: 206 ETPVVKPSKHLFIHLDKLSAEVEKHMNNQLDSNNHWSANAISIARSWIKGGLEKRCITRD 265

Query: 213 TFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---I 263
              WG+ +P  P++   + YVW DA   Y++ T  L    G     W   PA++ +   +
Sbjct: 266 -LKWGVPVPL-PEFQDKVFYVWFDAPVGYMSITKDLV---GDAWTSWWKNPAEVELYNFV 320

Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEV 320
           GKD + FHA+ +PA  + A  N      + +  ++ ++  K SKS G  V   +     +
Sbjct: 321 GKDNVAFHAVMFPASQIGARDNYTTVNHLCATEYLNYEDTKFSKSRGTGVFGDMARDTGI 380

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+      +D  +  D    +VN++L + +GN V+R++S +   + G+IP  
Sbjct: 381 EADVWRFYLLYLRPETQDTSFAWDDFALKVNSELLSNLGNFVNRALSFVAASFGGLIPE- 439

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                ++  +L      L E    +    +   +++++ +    ++Y  + +PW L K +
Sbjct: 440 MELGNAEIELLEAVRSDLSEYDSLLTAVKLRDGISKILQISRRGNQYMQSMQPWVLIKGD 499

Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                RA TV+ V   +   +A+LL  ++P+++ +I +   + D
Sbjct: 500 EQQKKRAGTVIGVAANIAYLIAVLLHPYMPEVSARIREQCGLVD 543


>gi|258568590|ref|XP_002585039.1| methionyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906485|gb|EEP80886.1| methionyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 657

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 231/521 (44%), Gaps = 53/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
            K +  + I++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G    
Sbjct: 10  QKGQRNILITSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +   I +D F RT  ++H +  + ++K++ D G +
Sbjct: 70  TKALEEGVTPEQLCAKYNKIHQEVYEWFGIGFDIFGRTPTQKHTEISQRIFKRLYDNGFL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162
            +      Y  + E++  D  V       +Y+                    NP   ++ 
Sbjct: 130 EEKTAEQPYCEKHESFLADRYVEGECPRCHYDDARGDQCDKCGNLLDPFDLINPRCKVDG 189

Query: 163 EGYFFRLSAYQDKLLSYYESH-PEFILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213
                R + +   LL   +    E++ P IE+      + VI  S++K GLKD  ++R  
Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEEWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264
             WG+ +P +     ++YVW +A   Y + T  Y D+      + W   P D+ +   +G
Sbjct: 249 LKWGVPVPLEGYENKVLYVWFEACIGYPSITANYTDD-----WELWWRSPEDVQLYQFLG 303

Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FHA+ +P   L       +   + +  ++ ++  K SKS G  V         + 
Sbjct: 304 KDNVPFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYESGKFSKSRGIGVFGNNAKDTGIP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y G++P 
Sbjct: 364 ADVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSGVVPD 423

Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436
              FT  ES   +L   + +L++  E M+   +   LA  + +    +    + K    L
Sbjct: 424 ---FTVQESFNPVLDDITTILRQYIEEMETVHLRAGLATAMRVAEAGNNLIQSNKLDNSL 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               P+RA+TV+ + + +I   A +   ++P  +  I + L
Sbjct: 481 IANEPERAATVVGIVINLIHLCASVFSPYLPATSKSILEQL 521


>gi|189083764|ref|NP_001121131.1| methionyl-tRNA synthetase [Rattus norvegicus]
          Length = 902

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 225/512 (43%), Gaps = 55/512 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 327

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT        + +++++  +G + +    
Sbjct: 328 GLTPQEICDKYHAIHVDIYRWFNISFDTFGRTTTPLQTKITQDIFQRLLTRGFVLQDTVE 387

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           + +P
Sbjct: 388 ---QLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKRPQCKVCRSHP 444

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V     +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    
Sbjct: 445 VV-KSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 502

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267
           WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD 
Sbjct: 503 WGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDN 558

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P   L A  N  L K + +  ++ ++  K SKS G  V   +     +  D 
Sbjct: 559 VPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADI 618

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T
Sbjct: 619 WRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLT 677

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--- 441
             D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K +    
Sbjct: 678 HDDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGDEMDR 737

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            RA TV  + V +   L+++LQ ++P +++ I
Sbjct: 738 QRAGTVTGMAVNIAALLSVMLQPYMPTVSSTI 769


>gi|197104673|ref|YP_002130050.1| methionyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478093|gb|ACG77621.1| methionyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 606

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 127/548 (23%), Positives = 219/548 (39%), Gaps = 85/548 (15%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G  A  M+ ADV ARF R  G + L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGTLAGSMLPADVYARFQRARGRETLYICATDEHGTPTELAAAE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F  Q       +     +S+D F R++  ++H   +   + + + G I +   
Sbjct: 63  AGLDPATFCAQQHEVQHRLGRAFGLSWDHFGRSSSPQNHRLTQRFAQTLWEAGFIEERVT 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEG--------- 164
              YS  D  +  D  V        Y+ A G Q  N     +P   +             
Sbjct: 123 QQVYSNADRRFLPDRYVIGTCPHCGYEAARGDQCENCTRVLDPADLLHPRSAVSGSTDIE 182

Query: 165 ------YFFRLSAYQDKLLSYYESH----PEFILPIERRNEVISFVKSGLKDLSLSR--- 211
                  F R S +  KL  + E+     P  +  I      + ++  GL+D  ++R   
Sbjct: 183 IRGSKHLFLRQSLFAGKLRDWIEAKRGRWPHLVTSI-----ALKWLDEGLQDRGITRDLE 237

Query: 212 -----KTFDWGI----KIPDDPQY---IMYVWIDALTNYLTTT-----------GYLDNP 248
                  F+WG     K+PD       + YVW DA   Y+  T           G     
Sbjct: 238 WGVPVNAFEWGPNPDGKLPDVEGLAGKVFYVWFDAPIEYIGATWEWAESRAVEAGRPGAD 297

Query: 249 DGSKAKFWPAD-------LHVIGKDILRFHAIYWPAFLLSANLPL------------PKK 289
           D    ++W          +  +GKD + FH + +P  L+  N  L            P K
Sbjct: 298 DIEWERWWRGPEASDVTYVEFMGKDNVPFHTVGFPCTLIGVNERLGAGGAWRVAEARPWK 357

Query: 290 VFS--HGF--ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           +     GF  + + G K S S G  +     +E +  D  R++++       D  +  + 
Sbjct: 358 LVDDLKGFNWLDYYGGKFSTSQGRGVFMDHALELLPADYWRWWIMANAPETSDATFAWEQ 417

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            + +VNADLA+ +GN V+R        ++G +P  G   E + ++ +     L+E+  ++
Sbjct: 418 FRDQVNADLADVLGNFVNRICKFAESRFEGQVPEGGEPGELETALEADVLMKLRELTGHL 477

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +++   +A   +  L    ++Y     PW   KT+ DRA+  +   + +    A + + F
Sbjct: 478 EDREFRKATTALRQLWVLGNQYLTEAAPWTAIKTDRDRAAVAVRYGLNLAALFAKVSEPF 537

Query: 466 VPKLANKI 473
           +P  A K+
Sbjct: 538 IPFAAEKV 545


>gi|329889121|ref|ZP_08267464.1| methionyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844422|gb|EGF93986.1| methionyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 569

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/522 (22%), Positives = 216/522 (41%), Gaps = 48/522 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G DVL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVWARFMRARGHDVLYVCATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+  +  +  AD   +S+D F R++   +    +   K + ++G I +   
Sbjct: 63  AGQDVRTYCDEQHQVQKKAADAFSLSFDIFGRSSNAPNTRLTQHFAKVLEERGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NP---------VQ 158
              YS+ D  +  D  V        Y+ A G Q  N           NP         ++
Sbjct: 123 RMIYSIDDARFLPDRYVEGTCPHCAYEKARGDQCDNCGRLLDPTDLINPYSAVSGSRNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +   D + ++ ++      P+ R +     +  GL D  ++R    WG+
Sbjct: 183 VRDTRHLYLLQTKIADDVRAWVDARSPQWQPLAR-SIAYKHLDEGLIDRGITRD-LKWGV 240

Query: 219 KI--------PDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD--------LH 261
            +        P     + YVW DA   Y+  T  + +   G+   +W  D        + 
Sbjct: 241 PVVGPDGGPRPGMEGKVFYVWFDAPIEYIGATEEWAEQTGGNWRSWWRLDEGAEDVRYVQ 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P     ++ +  ++   G K S S+G  +   + +E 
Sbjct: 301 FMGKDNVAFHTVSFPATILGSGEPWKTVDQLKAFNWLNWYGGKFSTSMGRGVFMDQALEL 360

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R+ L        D  +  +  +   N DLA+ +GN V+R V      +DG+ P 
Sbjct: 361 LPADYWRWHLTAYGPEHSDAAFTWEQFQSTTNKDLADVLGNFVNRIVKFTESKFDGVAPE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +E + +     L  +    +     +A     +L    + Y     PW   KT
Sbjct: 421 GGEPGALEEKLAADVKAALASLTYEFEAMEFRKAAQAARALWVLGNEYLQEAAPWTALKT 480

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + +RA+ V+   + ++   A +   F+P+ A +I   +   D
Sbjct: 481 DRERAAVVVRTGLSLVALFARVTAPFMPEAAARIAATVGATD 522


>gi|149066599|gb|EDM16472.1| rCG59785, isoform CRA_a [Rattus norvegicus]
          Length = 910

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 225/512 (43%), Gaps = 55/512 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 268 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 327

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT        + +++++  +G + +    
Sbjct: 328 GLTPQEICDKYHAIHVDIYRWFNISFDTFGRTTTPLQTKITQDIFQRLLTRGFVLQDTVE 387

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           + +P
Sbjct: 388 ---QLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKRPQCKVCRSHP 444

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V     +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    
Sbjct: 445 VV-KSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 502

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267
           WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD 
Sbjct: 503 WGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDN 558

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P   L A  N  L K + +  ++ ++  K SKS G  V   +     +  D 
Sbjct: 559 VPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADI 618

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T
Sbjct: 619 WRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPE-MVLT 677

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--- 441
             D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K +    
Sbjct: 678 HDDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGDEMDR 737

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            RA TV  + V +   L+++LQ ++P +++ I
Sbjct: 738 QRAGTVTGMAVNIAALLSVMLQPYMPTVSSTI 769


>gi|149715335|ref|XP_001488941.1| PREDICTED: methionyl-tRNA synthetase [Equus caballus]
          Length = 900

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 226/512 (44%), Gaps = 55/512 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLFSRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINATELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V     +  F  L   + +L  + E+  P        R  + S+++ GLK   ++R    
Sbjct: 443 VV-KSSQHLFLDLPKLEKRLEEWLENTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 500

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267
           WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD 
Sbjct: 501 WGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVSLYQFMAKDN 556

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D 
Sbjct: 557 VPFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADI 616

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T
Sbjct: 617 WRFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLT 675

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD- 442
             D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D 
Sbjct: 676 SDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADR 735

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 736 QRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|118386032|ref|XP_001026138.1| methionyl-tRNA synthetase [Tetrahymena thermophila]
 gi|89307905|gb|EAS05893.1| methionyl-tRNA synthetase [Tetrahymena thermophila SB210]
          Length = 837

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 212/517 (41%), Gaps = 59/517 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G     +++ DV AR+ R  G + ++  GTDE+G      A
Sbjct: 265 QRNILITSALPYVNNAPHLGTLIGCVLSGDVFARYCRSRGYNTIYICGTDEYGTATEMKA 324

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T      +  +  +D+ D  DI +D F RTT ++H    + ++  +   G I + 
Sbjct: 325 LQEKTTPAEICTKYYKIQKDVYDWFDIDFDIFGRTTTEKHTKISQDIFLTLHKNGYIKED 384

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH---------------NPVQWMEEEGYFF 167
                +    + +  D  V    +G     QH               NP + +  +    
Sbjct: 385 IMHQSFCAACDKFLADRYV----NGTCPFCQHDDCHGDQCDKCGKLVNPAELINPKCTIC 440

Query: 168 R----LSAYQDKLLSYYESHPEFILPIERRNE-----------VISFVKSGLKDLSLSRK 212
           +    +   +   L   +   E    IE+R++             +++K+GLK   ++R 
Sbjct: 441 KNPSVIKETKHCFLDLPQLEKEIDEFIEKRSKEGDWSDNAYKTSKAWIKNGLKYRCITRD 500

Query: 213 TFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADLHV 262
              WG  IP       +MYVW DA   Y + T  L         NP+  K          
Sbjct: 501 -LKWGTPIPLAGWENKVMYVWFDAPIGYPSITANLVEDWEKWWKNPENVKL------YQF 553

Query: 263 IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS--LGNVIDPIEVIE 318
           IGKD + FH + +P  LL    N  L   + S  ++ ++  K SKS  +G   D  +   
Sbjct: 554 IGKDNIPFHCVIFPGTLLGTRENWTLLNSMSSCEYLQYESGKFSKSKCVGVFGDDAQKTG 613

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            + V+  RY+L+       D  +       + N +L   +GNLV R +  +    +  +P
Sbjct: 614 -IPVEVWRYYLLINRPEQNDTNFQWSDFAAKNNNELLPNVGNLVQRILKFLYSKLEKKVP 672

Query: 379 TP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           T       E D++ L+    + Q+   +M+   +  AL  V+ + SE + Y    +PW  
Sbjct: 673 TLDFSLLNEEDKNWLASIWNLFQQYLSHMEKVELKSALKVVMQISSEGNNYMQKNEPWNK 732

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 R    L+V V +IR L+ L + F+P L+ KI
Sbjct: 733 ANQETGRHIVSLFVLVNIIRFLSALFEPFMPTLSAKI 769


>gi|41056059|ref|NP_956370.1| methionyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|37682147|gb|AAQ98000.1| methionine-tRNA synthetase [Danio rerio]
          Length = 922

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 225/514 (43%), Gaps = 53/514 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G ++L+  GTDE+G      A
Sbjct: 261 KRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKA 320

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+       +     I +D F RTT +   +  + ++ ++ ++G + + 
Sbjct: 321 REEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLED 380

Query: 123 CYSGWYSLRDEAY--YNDDEVYKG----------------ADGQYYNAQH--NPVQWMEE 162
                  LR E    +  D   +G                  G+  NA    NP   + +
Sbjct: 381 TVE---QLRCEGCQRFLADRFVEGECPHCRFPEARGDQCDKCGRLINAVELKNPQCKVCK 437

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIER---------RNEVISFVKSGLKDLSLSRKT 213
           E    R S +    L   E   E  L             R+   S+++ GLK   ++R  
Sbjct: 438 ETPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD- 496

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGK 265
             WG  +P  D  + + YVW DA   YL+ T  Y D  +    ++W     V     + K
Sbjct: 497 LKWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWE----RWWKNPQQVELYNFMAK 552

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  V   +     +  
Sbjct: 553 DNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPS 612

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+     G+D  +    +  + N++L N +GN ++R+   + K +DG +P    
Sbjct: 613 DVWRFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFDGCVPEMLL 672

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             +    I  VC  + Q I + +    I  AL  ++++    ++Y    +PW+  K   +
Sbjct: 673 NDDDKRLIAQVCWELKQYI-QLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAE 731

Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              RA TV  V+V V   LA +L+ F+P ++  I
Sbjct: 732 DRCRAGTVTGVSVNVACLLAAVLEPFMPTVSLSI 765


>gi|195149636|ref|XP_002015762.1| GL10845 [Drosophila persimilis]
 gi|194109609|gb|EDW31652.1| GL10845 [Drosophila persimilis]
          Length = 1021

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 218/518 (42%), Gaps = 63/518 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRCAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+       +     I +D F RTT +   D  +  +K +   G I      
Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVHSAGYIITESVE 375

Query: 126 GWYSLRDEAYYNDDEV-----YKGAD------------GQYYNAQH---------NPVQW 159
                + + +  D  V     + G              G+  NA           N    
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYADARGDQCDKCGKLVNATELIRPRCKVCNTAPI 435

Query: 160 MEEEGYFF--------RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           +      F        RL  + DK  + +  + + I          ++++ GLK   ++R
Sbjct: 436 LRSSDQLFIDLPKAEPRLREWVDKAENGWTHNAKVI--------TRAWLREGLKPRCITR 487

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHV 262
               WGI +P     + + YVW DA   Y++ T           K+W PA          
Sbjct: 488 D-LKWGIPVPHSGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQKWWQPAKGTDVELFQF 543

Query: 263 IGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEE 319
           + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  V         
Sbjct: 544 MAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQATG 603

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K+++ ++P 
Sbjct: 604 IPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSIVPE 663

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A TE +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K 
Sbjct: 664 VVA-TEEELILLALVNRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKG 722

Query: 440 NPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           N +   RA+T++ +   +   LA LL  ++P  A  +F
Sbjct: 723 NDEQKKRAATIIGLCANIACLLANLLFPYMPSTARTLF 760


>gi|328948204|ref|YP_004365541.1| methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448528|gb|AEB14244.1| Methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 775

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 221/525 (42%), Gaps = 56/525 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K   +  +++A+ Y N  PH+G+  +M+ ADV ARF R  G + L+  GTDE+G     
Sbjct: 4   IKNLNRRLVTSALPYVNNIPHLGNLIQMLSADVFARFCRSRGYETLYVCGTDEYGTATET 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D   +   ++    DI++D F RT+ +   +  + ++K +   G I 
Sbjct: 64  RAVEEKKTPRELCDYYYKQHDEIYKWFDIAFDKFGRTSNEECTEITQAMFKDLDKNGFIK 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM--------- 160
           +      +    + +  D  V+           +G       +  +PV+           
Sbjct: 124 EHTNKQLFCPSCQMFLADRYVHGVCPKCGFEDARGDQCDKCGSLLDPVELKSPRCATCGS 183

Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E    +  L +    L S+  ++  E        N   ++++ GL + +++R   
Sbjct: 184 TPEIRETRHLYIDLPSISKNLDSWMNKTSKEGRWSDNAINITKAWIRDGLNERAITR-DL 242

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL-------DNPDGSKAKFW--------- 256
            WGI +P       + YVW +A   Y++ T  L         P      +W         
Sbjct: 243 KWGIPVPKAGYENKVFYVWFNAPIGYISITKQLADELIAASKPSFDWKSWWLPEESEEAK 302

Query: 257 ---PADL-HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNV 310
              P DL   IGKD + FH + +P   + +     K   + S  ++ ++  K SKS G  
Sbjct: 303 NKPPVDLFQFIGKDNIPFHTVIFPCSQIGSGHNFTKLFHMSSTEYLNYEDGKFSKSRGVG 362

Query: 311 IDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +   +  E  +  DA R+++       +D  +     ++R N +L   +GNLV+R++  +
Sbjct: 363 VFGTDAKESGIKADAWRFYIFYNRPEKQDYQFTWKEFRERYNGELIGNLGNLVNRTLLFV 422

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K YD  IP        DE + +       +  + ++   +  A  +V  +    ++ F 
Sbjct: 423 QKYYDSKIPDAPV----DEKLWAQVKEHEAKATDYLEWANLKDAFHEVFVISDIGNKAFQ 478

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +PW+ ++T+P+RA+ +++    +I+ L I+   ++P+ A KI 
Sbjct: 479 DTEPWKTRETHPERAAKLIHNLCYMIKDLMIMAHPYMPQFAEKIM 523


>gi|328776868|ref|XP_003249232.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Apis mellifera]
          Length = 919

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 230/522 (44%), Gaps = 52/522 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ + + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + LF +GTDE+G     
Sbjct: 217 KDEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLFISGTDEYGTATEA 276

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+    +I +D F RTT     +  +  + +I  +G I 
Sbjct: 277 KALEEKTTPQSICDKFFDIHNDIYRWFNIGFDYFGRTTTPEQTEIVQKFFLRIKSQGYIL 336

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
                       + +  D  V        Y+ A G   +   + +   +           
Sbjct: 337 SETVDQLLCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLINATDLISPRCKVCSN 396

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213
                  E +F  L   ++KL  +  +       + R   V++  +++ GLK   ++R  
Sbjct: 397 RPIIKKSEQFFLDLPKLENKLKEWLSTVENGWSGVAR---VVAKPWLRDGLKPRCITRD- 452

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV-----IGK 265
             WGI +P       + YVW DA   Y++ T           ++W P D+ V     + K
Sbjct: 453 LKWGIPVPIKGFENKVFYVWFDAPFGYMSITKRYTK---EYEQWWKPKDIKVDLYQFMAK 509

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322
           D + FHAI +PA LL+AN    L K + +  ++ ++  K SKS G  +   +   + G+ 
Sbjct: 510 DNVPFHAIMFPASLLAANEDYILLKHLMATEYLNYEDTKFSKSRGIGVFGTDA-RDTGIP 568

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L       +D  ++   L  + N++L N  GN V+R++  + + ++  IP P 
Sbjct: 569 SDVWRFYLAYVRPETQDSNFNWVDLATKNNSELLNNFGNFVNRALVFVERYFESKIP-PI 627

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTN 440
              E D  +L++  R L      M+   +   L  ++++    ++Y   Q+PW ++K T+
Sbjct: 628 ELQEDDLIVLALAQRELSSYICAMEQAKLRDGLKHILAISKHGNQYMQFQEPWVKIKGTD 687

Query: 441 PD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D  RA T++ ++  +   L+ LL  F+P  A ++   L +A
Sbjct: 688 NDKKRAGTIIGISCNMACLLSALLAPFMPSTARELRSQLGLA 729


>gi|224532120|ref|ZP_03672752.1| methionyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511585|gb|EEF81991.1| methionyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 724

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 109/500 (21%), Positives = 213/500 (42%), Gaps = 43/500 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A     T
Sbjct: 7   VTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEKTT 66

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                ++     + +    +I +D F RTT K H +  +  + K+   G I +     ++
Sbjct: 67  PLELCNKYYEIHKSIYKWFNIDFDIFGRTTNKHHQEIVQNFFLKLEKNGYIKERETEQFF 126

Query: 129 SLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +D  +  D            + KG      +   NP+  +  +    +      K   
Sbjct: 127 CNKDSIFLADRYVIGECPECQSIAKGDQCDNCSKLLNPIDLINPKCIICKNKPILKKTNH 186

Query: 179 YYESHPEFILPIER---------------RNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            Y   P+    +E+                N   SF++ GLK+ +++R    WGI +P  
Sbjct: 187 LYIDLPKIKTKLEKWIKNPNTSKNWNTNALNMTNSFLRDGLKERAITR-DLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWP 276
                + YVW DA   Y++ T    N   +   +W  +  V     IGKD + FH I +P
Sbjct: 246 GYENKVFYVWFDAPIGYISIT---KNIVKNWKSWWKNNEQVNLVQFIGKDNILFHTIIFP 302

Query: 277 AFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
              + +  N  +  ++ S  ++ ++  K SKS G  I   + I   +  D  R+++    
Sbjct: 303 CIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDVWRFYIYYNR 362

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D  +      +RVN +L +   NLV+R ++   K +  ++       +  + I   
Sbjct: 363 PEKSDFQFMWQDFMERVNTELIDNFSNLVNRVLTFQKKFFGDVVEPIEIQNKFWKQITPK 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++L   ++      +  AL +++ + S  ++ F   +PW+ K + P     ++   + 
Sbjct: 423 YNKILNLFKKTE----LKSALKEILKISSLGNKIFQDNEPWKRKDSFPQETKELILNLIY 478

Query: 454 VIRQLAILLQAFVPKLANKI 473
           +IR L+IL+  F+P+ + KI
Sbjct: 479 LIRDLSILMMPFIPETSKKI 498


>gi|73968525|ref|XP_859038.1| PREDICTED: similar to methionine-tRNA synthetase isoform 5 [Canis
           familiaris]
          Length = 907

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 224/508 (44%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVVK 445

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 446 SSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271
           +P +     + YVW DA   YL+ T  Y D  +    ++W  P  +++   + KD + FH
Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 561 GLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D 
Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445
            +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D  RA 
Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P ++  I
Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|328776866|ref|XP_397235.3| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Apis mellifera]
          Length = 960

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 230/522 (44%), Gaps = 52/522 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ + + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + LF +GTDE+G     
Sbjct: 258 KDEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLFISGTDEYGTATEA 317

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+    +I +D F RTT     +  +  + +I  +G I 
Sbjct: 318 KALEEKTTPQSICDKFFDIHNDIYRWFNIGFDYFGRTTTPEQTEIVQKFFLRIKSQGYIL 377

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
                       + +  D  V        Y+ A G   +   + +   +           
Sbjct: 378 SETVDQLLCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLINATDLISPRCKVCSN 437

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213
                  E +F  L   ++KL  +  +       + R   V++  +++ GLK   ++R  
Sbjct: 438 RPIIKKSEQFFLDLPKLENKLKEWLSTVENGWSGVAR---VVAKPWLRDGLKPRCITRD- 493

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV-----IGK 265
             WGI +P       + YVW DA   Y++ T           ++W P D+ V     + K
Sbjct: 494 LKWGIPVPIKGFENKVFYVWFDAPFGYMSITKRYTK---EYEQWWKPKDIKVDLYQFMAK 550

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322
           D + FHAI +PA LL+AN    L K + +  ++ ++  K SKS G  +   +   + G+ 
Sbjct: 551 DNVPFHAIMFPASLLAANEDYILLKHLMATEYLNYEDTKFSKSRGIGVFGTDA-RDTGIP 609

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L       +D  ++   L  + N++L N  GN V+R++  + + ++  IP P 
Sbjct: 610 SDVWRFYLAYVRPETQDSNFNWVDLATKNNSELLNNFGNFVNRALVFVERYFESKIP-PI 668

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTN 440
              E D  +L++  R L      M+   +   L  ++++    ++Y   Q+PW ++K T+
Sbjct: 669 ELQEDDLIVLALAQRELSSYICAMEQAKLRDGLKHILAISKHGNQYMQFQEPWVKIKGTD 728

Query: 441 PD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D  RA T++ ++  +   L+ LL  F+P  A ++   L +A
Sbjct: 729 NDKKRAGTIIGISCNMACLLSALLAPFMPSTARELRSQLGLA 770


>gi|73968519|ref|XP_531646.2| PREDICTED: similar to methionine-tRNA synthetase isoform 1 [Canis
           familiaris]
          Length = 898

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 224/508 (44%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVVK 445

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 446 SSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271
           +P +     + YVW DA   YL+ T  Y D  +    ++W  P  +++   + KD + FH
Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 561 GLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D 
Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445
            +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D  RA 
Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P ++  I
Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|331243750|ref|XP_003334517.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313507|gb|EFP90098.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 711

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 128/573 (22%), Positives = 238/573 (41%), Gaps = 79/573 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL--DVLFTTGTDEHGQK 57
           + +R  + I++A+ Y N  PH+G+     + ADV AR+ R   +   VL+  GTDE+G  
Sbjct: 31  LSDRPNILITSALPYVNNAPHLGNIIGSTLSADVFARYSRTGPVVAQVLYICGTDEYGTT 90

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
               A   G+T     D+  +  +D     DI +D F RTT  +  + C+ ++  + D G
Sbjct: 91  TETKALEEGMTPSDLCDKYHQIHKDSYQWFDIGFDHFGRTTTPKQTEICQEIFTALYDNG 150

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG---------------ADGQYYNAQHNPVQWMEE 162
            + +      Y  +D          +G                D +       P+   + 
Sbjct: 151 HLTEHEIEQVYCEKDARQVLSGSGARGDQCDTCCQTLDAIELIDKKCKICSSTPIS-KKS 209

Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +  F  L   Q ++ S+Y S  E        +    ++++ GL++  L+R    WG+ +P
Sbjct: 210 KHLFIDLPKLQKQIESWYNSAKEGHHWSSNGKAFTEAWLRDGLRERCLTRD-LKWGVPVP 268

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHAIY 274
                  +MYVW DA   Y + T    N      K+W  P ++ +   +GKD + FH I 
Sbjct: 269 IKGWEDKVMYVWFDAPIGYPSITANYSN---DWEKWWKNPKEVTLYQFMGKDNVPFHTIL 325

Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVDALRY 327
           +PA+L+       +   + +  ++ ++  K SKS      G      +V  EV     RY
Sbjct: 326 FPAYLMGTGQEWTMLNHISTTEYLQYENVKFSKSNNVGVFGQNARETQVPSEV----WRY 381

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP------- 380
           FL+       D  +       + N++L N +GN V+R V      Y  ++P P       
Sbjct: 382 FLISTRPETNDSQFTWTDFISKANSELLNNLGNFVNRIVKFCNARYHSIVPDPLSWPVVG 441

Query: 381 -------------------------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                                     +F E D++ +   + +L +  E+M++  + +AL+
Sbjct: 442 PPTQSESASKEDESSSTTSTQITSRESFDEEDQAFVGDINGLLTQYIESMESLKLRQALS 501

Query: 416 QVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V+++ +  ++Y    K  + L   +P R + ++ V++ ++  L++L+   +P  +  I 
Sbjct: 502 IVMAISARGNQYLQENKIDYSLLLASPRRCAQIVLVSLNLVYLLSVLVYPSMPSTSELIL 561

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             L  A + R  ++    L PG   H   D I+
Sbjct: 562 KQLN-APKRRLSRTFGIDLLPG---HTIGDAIY 590


>gi|73968523|ref|XP_849532.1| PREDICTED: similar to methionine-tRNA synthetase isoform 3 [Canis
           familiaris]
          Length = 905

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 224/508 (44%), Gaps = 47/508 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
                R   +  D  V        Y+ A G   +     +  +E                
Sbjct: 386 QLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVVK 445

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  
Sbjct: 446 SSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTP 504

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271
           +P +     + YVW DA   YL+ T  Y D  +    ++W  P  +++   + KD + FH
Sbjct: 505 VPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVNLYQFMAKDNVPFH 560

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
            + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D  R++
Sbjct: 561 GLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T  D 
Sbjct: 621 LLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTSDDR 679

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD--RAS 445
            +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D  RA 
Sbjct: 680 RLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAG 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKI 473
           TV  + V +   L+++LQ ++P ++  I
Sbjct: 740 TVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|296487656|gb|DAA29769.1| methionyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 898

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 228/516 (44%), Gaps = 63/516 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-----IERRNEVISFVKSGLKDLSLSR 211
           V     +  F  L     KL +  E   E  LP        R  + S+++ GLK   ++R
Sbjct: 443 VV-KSSQHLFLDLP----KLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCITR 497

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---I 263
               WG  +P +     + YVW DA   YL+ T  Y D  +    K+W  P  +++   +
Sbjct: 498 D-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----KWWKNPEQVNLYQFM 552

Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320
            KD + FH I +P+  L A  N  L   + +  ++ ++  K SKS G  V   +     +
Sbjct: 553 AKDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 612

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P  
Sbjct: 613 PADIWRFYLLYIRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFVPE- 671

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438
              T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K  
Sbjct: 672 MVLTSDDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGG 731

Query: 439 -TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 732 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|297250681|ref|ZP_06934199.1| methionine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838302|gb|EFH22240.1| methionine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 462

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 14/277 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL------DNPDGSKAK 254
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L      D  +  KA 
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDSPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAG 69

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        SD ++L+  +   + I E  +N+   +AL  +++L   V+ Y DA K
Sbjct: 190 FEGKLKDV-----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           PWEL K    +   +  V  E+I    IL     P L
Sbjct: 245 PWELAKQE-GQDERLHEVCSELINAFTILTAYLAPVL 280


>gi|34785759|gb|AAH57463.1| Mars protein [Danio rerio]
          Length = 913

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 225/514 (43%), Gaps = 53/514 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G ++L+  GTDE+G      A
Sbjct: 261 KRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATENKA 320

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+       +     I +D F RTT +   +  + ++ ++ ++G + + 
Sbjct: 321 REEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLLED 380

Query: 123 CYSGWYSLRDEAY--YNDDEVYKG----------------ADGQYYNAQH--NPVQWMEE 162
                  LR E    +  D   +G                  G+  NA    NP   + +
Sbjct: 381 TVE---QLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCGRLINAVELKNPQCKVCK 437

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIER---------RNEVISFVKSGLKDLSLSRKT 213
           E    R S +    L   E   E  L             R+   S+++ GLK   ++R  
Sbjct: 438 ETPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD- 496

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGK 265
             WG  +P  D  + + YVW DA   YL+ T  Y D  +    ++W     V     + K
Sbjct: 497 LKWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWE----RWWKNPQQVELYNFMAK 552

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  V   +     +  
Sbjct: 553 DNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPS 612

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+     G+D  +    +  + N++L N +GN ++R+   + K ++G +P    
Sbjct: 613 DVWRFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFEGCVPEMLL 672

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             +    I  VC  + Q I + +    I  AL  ++++    ++Y    +PW+  K   +
Sbjct: 673 NDDDKRLIAQVCWELKQYI-QLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAE 731

Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              RA TV  V+V V   LA +L+ F+P ++  I
Sbjct: 732 DRCRAGTVTGVSVNVACLLAAVLEPFMPTVSLSI 765


>gi|225076782|ref|ZP_03719981.1| hypothetical protein NEIFLAOT_01833 [Neisseria flavescens
           NRL30031/H210]
 gi|224951880|gb|EEG33089.1| hypothetical protein NEIFLAOT_01833 [Neisseria flavescens
           NRL30031/H210]
          Length = 463

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAK 254
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G       KA 
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAG 69

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        +D  +L+  +   + I E  +N+   RAL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKDV-----TDSELLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K     +R   V    +     L   L   +P+ A
Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284


>gi|195029951|ref|XP_001987835.1| GH19733 [Drosophila grimshawi]
 gi|193903835|gb|EDW02702.1| GH19733 [Drosophila grimshawi]
          Length = 1023

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 223/514 (43%), Gaps = 49/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRAAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+       +     I +D F RTT +   D  +  +K + + G I      
Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVYNAGYILTESVE 375

Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEGYFFR------- 168
                + + +  D  V          Y+ A G   +     V   E      +       
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNTAPV 435

Query: 169 LSAYQDKLLSYYESHPEFILPIER---------RNEVISFVKSGLKDLSLSRKTFDWGIK 219
           L + +   L   ++ P+    ++R         R    ++++ GLK   ++R    WGI 
Sbjct: 436 LRSSEQLFLDLPKAEPQLREWVDRVENGWTHNARVITRAWLREGLKPRCITRD-LKWGIP 494

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-------IGKDILRF 270
           +P     + + YVW DA   Y++ T           ++W  D +        + KD + F
Sbjct: 495 VPHKNFEKKVFYVWFDAPFGYVSMTKRYTK---DYEQWWRPDANTDVQLFQFMAKDNVPF 551

Query: 271 HAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALR 326
           H++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  +E G+  D  R
Sbjct: 552 HSVVWPSVLLAVNKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K++   +P      + 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVPHV-VLAQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--- 443
           +  +L++ +R L+    +M+   +   +  ++++    + Y   Q+PW L K N D+   
Sbjct: 670 EVVLLALINRELRGYINSMEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNADQKTH 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A+T++ + + +   LA LL  ++P  A ++F  L
Sbjct: 730 AATIIGLCINIACLLANLLFPYMPSTARQLFAQL 763


>gi|17540794|ref|NP_502196.1| Methionyl tRNA Synthetase family member (mrs-1) [Caenorhabditis
           elegans]
 gi|3915072|sp|Q20970|SYMC_CAEEL RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3877884|emb|CAA97803.1| C. elegans protein F58B3.5a, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 917

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 217/511 (42%), Gaps = 44/511 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      A
Sbjct: 34  KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G T +   D+     + + +   I +  F RTT     + C+ ++ K+   G     
Sbjct: 94  LQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSSQ 153

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFRLSA 171
                Y  + E +  D  V        Y  A G   +      N V   + + +  + + 
Sbjct: 154 SVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKATP 213

Query: 172 ----------YQDKLLSYYESHPEFILPIE----RRNEV---ISFVKSGLKDLSLSRKTF 214
                       DKL      H +  L  E      N V    +++K GL    ++R   
Sbjct: 214 EVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRCITRD-L 272

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269
            WG  +P D   + + YVW DA   YL+ T  +   + +K    P ++ +   +GKD + 
Sbjct: 273 KWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFVGKDNVA 332

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVI--DPIEVIEEVGVDAL 325
           FHA+ +P   L AN    +   + +  ++ ++  K SKS G  I  D  +  E +  D  
Sbjct: 333 FHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTE-IPADIW 391

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G++P     T 
Sbjct: 392 RFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMN-LTN 450

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            D  +LS       +  +      +  A+  ++++    ++Y  AQ PW L K + +   
Sbjct: 451 DDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPWVLMKKDEEGKK 510

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           RA T++ V   +   +++LL   +P ++  I
Sbjct: 511 RAGTIIGVAANIAYHVSVLLYPIMPTISATI 541


>gi|289804263|ref|ZP_06534892.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 259

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 13/247 (5%)

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           N++  + +SGL+   +SR    +G +IP+ P    YVW+DA   Y+ +   L +  G   
Sbjct: 16  NKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTT 75

Query: 254 KF---WPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            F   W  D      H IGKDI+ FH+++WPA L  ++   P  +F HG++   G K+SK
Sbjct: 76  SFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSK 135

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSR 364
           S G  I     ++    D+LRY+   +++   D    + +   +RVNAD+ N + NL SR
Sbjct: 136 SRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASR 195

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   I K +DG++    A    D  +    +     I E  +++   +A+ ++++L    
Sbjct: 196 NAGFINKRFDGVLAAELA----DPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVA 251

Query: 425 DRYFDAQ 431
           +RY D Q
Sbjct: 252 NRYVDEQ 258


>gi|109097438|ref|XP_001116063.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Macaca mulatta]
          Length = 900

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 227/511 (44%), Gaps = 53/511 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKAMEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
               LR E  A +  D   +G      Y  A+ +      +      L   Q K+     
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442

Query: 179 -YYESHPEFI-LP-IERRNE-------------------VISFVKSGLKDLSLSRKTFDW 216
               +H  F+ LP +E+R E                     S+++ GLK   ++R    W
Sbjct: 443 VVQSTHHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFITRSWLRDGLKPRCITRD-LKW 501

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDIL 268
           G  +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD +
Sbjct: 502 GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325
            FH I +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D  
Sbjct: 558 PFHGIVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD-- 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|325473110|gb|EGC76306.1| methionyl-tRNA synthetase [Treponema denticola F0402]
          Length = 792

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/507 (22%), Positives = 210/507 (41%), Gaps = 43/507 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +++A+ Y N  PH+G+  +++ ADV ARF RL   + L+  GTDE+G      A     +
Sbjct: 6   VTSALPYVNNFPHLGNLIQVLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEKKS 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +           ++ +  +I++D F RT+  +  +  + ++  +   G I +      Y
Sbjct: 66  PEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQLY 125

Query: 129 SLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               + +  D  V        Y GA G   ++     +P    E        S       
Sbjct: 126 CPSCKRFLADRYVLGTCPSCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGASPEVRSTT 185

Query: 178 SYYESHPEFILPIER-----------RNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD 223
             Y + P+ +   E+            N  +   KS L+D    R   +   WGI +P  
Sbjct: 186 HLYINLPKIVPEYEKWMPKTAEDGRWSNNALQMSKSWLRDGLQERAITRDLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYW 275
                + YVW DA   Y++ T    +  G   K W  D         IGKD + FH + +
Sbjct: 246 GFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFHTVIF 305

Query: 276 PAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332
           P  L+ +     K     G  ++ ++  K SKS G  +   +  E  +  D  R+++   
Sbjct: 306 PCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFYIFYN 365

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D  +     ++RVN++L   + NLV+R+ + + + YDG IP         E I S
Sbjct: 366 RPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFVHRYYDGKIPQVDGAKSGREDIKS 425

Query: 393 V-------CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +        S   ++I E      +  +  +  +L S  ++ F   +PW+ ++T+P+ A 
Sbjct: 426 MVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRRETDPEYAE 485

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++     +I+ + IL+  ++P+ A++
Sbjct: 486 ALMAELCYLIKDILILIHPYMPQYADQ 512


>gi|308456710|ref|XP_003090777.1| hypothetical protein CRE_09872 [Caenorhabditis remanei]
 gi|308260732|gb|EFP04685.1| hypothetical protein CRE_09872 [Caenorhabditis remanei]
          Length = 934

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 222/519 (42%), Gaps = 59/519 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      A
Sbjct: 48  KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 107

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+     + + +   I +  F RTT     + C+ ++ K+   G     
Sbjct: 108 LQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNG----- 162

Query: 123 CYSGWYSLRDEAYYN--------------------DDEVYKGADG--------QYYNAQH 154
            Y+   S+ D+ + N                    DD      DG        +  NA+ 
Sbjct: 163 -YTSTQSV-DQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKC 220

Query: 155 NPVQWMEE----EGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKD 206
           +  +   E       F  L   Q+K   Y +     +P+            S+ K GL+ 
Sbjct: 221 HMCKSAPEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEP 280

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262
             ++R    WG  +P +   + + YVW DA   YL+ T  +   D +K    P ++ +  
Sbjct: 281 RCITRD-LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPKNVELYN 339

Query: 263 -IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FHA+ +P   L AN    +   + +  ++ ++  K SKS G  I   +  + 
Sbjct: 340 FVGKDNVAFHAVMFPCSQLGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFG-DAAQG 398

Query: 320 VGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            G+  D  R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G+I
Sbjct: 399 TGIPADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVSNFFGGVI 458

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P     T++D   L   ++  ++  +      +  A+  ++++    ++Y  AQ PW L 
Sbjct: 459 PEI-QLTDADAEFLEEVNKECEQWDKQFDRVHLKDAVKSILNVSRLGNQYMQAQTPWVLM 517

Query: 438 KTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           K + +   RA T++ V   +   LA++L   +P ++  I
Sbjct: 518 KGSDEEKKRAGTIIGVAANIAYHLAVILYPVMPSISATI 556


>gi|269215053|ref|ZP_06159011.1| methionine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208418|gb|EEZ74873.1| methionine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 462

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 14/277 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL------DNPDGSKAK 254
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L      D  +  KA 
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAG 69

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRSPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        SD ++L+  +   + I E  +N+   +AL  +++L   V+ Y DA K
Sbjct: 190 FEGKLKDV-----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           PWEL K    +   +  V  E+I    IL     P L
Sbjct: 245 PWELAKQE-GQDERLHEVCSELINAFTILTAYLAPVL 280


>gi|194757892|ref|XP_001961196.1| GF13746 [Drosophila ananassae]
 gi|190622494|gb|EDV38018.1| GF13746 [Drosophila ananassae]
          Length = 1020

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 229/520 (44%), Gaps = 55/520 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A
Sbjct: 253 QRNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKA 312

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D+       +     I +D F RTT +   D  +  +K +   G I K 
Sbjct: 313 LAENLTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLSAGYIIKE 372

Query: 123 CYSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------EE 163
                   + + +  D  V          Y+ A G   +     V   E           
Sbjct: 373 SVEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNS 432

Query: 164 GYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKDLSLSRKT 213
               R S   D+L +   ++ P+    +++         +VI+  ++K GLK   ++R  
Sbjct: 433 APVIRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTNNAKVITRAWLKEGLKPRCITRD- 488

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIG 264
             WGI +P     + + YVW DA   Y++ T           ++W PA          + 
Sbjct: 489 LKWGIPVPHKGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDVELFQFMA 545

Query: 265 KDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  +E G+
Sbjct: 546 KDNVPFHSVVWPSILLAVNKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGI 604

Query: 323 --DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L      G+D  +  + L  R N++L N +GN V+R++    K+++  +P  
Sbjct: 605 PADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVPEV 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A T+ +  +L++ +R L+    +M+   +   +  ++++    + Y   Q+PW L K +
Sbjct: 665 -ALTQDELILLALINRELKGYINSMEKAKLRDGIRHLLAVSRHGNGYMQTQQPWVLLKGS 723

Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   RA+T++ ++  +   LA LL  ++P  A  +F  L
Sbjct: 724 DEQKKRAATIIGLSANIACLLANLLFPYMPTTARTLFSQL 763


>gi|125807237|ref|XP_001360316.1| GA13491 [Drosophila pseudoobscura pseudoobscura]
 gi|54635488|gb|EAL24891.1| GA13491 [Drosophila pseudoobscura pseudoobscura]
          Length = 1021

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/521 (22%), Positives = 219/521 (42%), Gaps = 63/521 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRCAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+       +     I +D F RTT +   D  +  +K +   G I      
Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVHSAGYIITESVE 375

Query: 126 GWYSLRDEAYYNDDEV-----YKGAD------------GQYYNAQH---------NPVQW 159
                + + +  D  V     + G              G+  NA           N    
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYADARGDQCDKCGKLVNATELIRPRCKVCNTAPI 435

Query: 160 MEEEGYFF--------RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           +      F        RL  + DK  + +  + + I          ++++ GLK   ++R
Sbjct: 436 LRSSDQLFIDLPKAEPRLREWVDKAENGWTHNAKVI--------TRAWLREGLKPRCITR 487

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHV 262
               WGI +P     + + YVW DA   Y++ T           K+W PA          
Sbjct: 488 D-LKWGIPVPHSGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQKWWQPAKGTDVELFQF 543

Query: 263 IGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEE 319
           + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  V         
Sbjct: 544 MAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQATG 603

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K+++ ++P 
Sbjct: 604 IPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSIVPE 663

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A TE +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K 
Sbjct: 664 VVA-TEEELILLALVNRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKG 722

Query: 440 NPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   RA+T++ +   +   LA LL  ++P  A  +F  L
Sbjct: 723 SDEQKKRAATIIGLCANIACLLANLLFPYMPSTARTLFAQL 763


>gi|308491426|ref|XP_003107904.1| CRE-MARS-1 protein [Caenorhabditis remanei]
 gi|308249851|gb|EFO93803.1| CRE-MARS-1 protein [Caenorhabditis remanei]
          Length = 920

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 222/519 (42%), Gaps = 59/519 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      A
Sbjct: 34  KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+     + + +   I +  F RTT     + C+ ++ K+   G     
Sbjct: 94  LQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNG----- 148

Query: 123 CYSGWYSLRDEAYYN--------------------DDEVYKGADG--------QYYNAQH 154
            Y+   S+ D+ + N                    DD      DG        +  NA+ 
Sbjct: 149 -YTSTQSV-DQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKC 206

Query: 155 NPVQWMEE----EGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKD 206
           +  +   E       F  L   Q+K   Y +     +P+            S+ K GL+ 
Sbjct: 207 HMCKSAPEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEP 266

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262
             ++R    WG  +P +   + + YVW DA   YL+ T  +   D +K    P ++ +  
Sbjct: 267 RCITRD-LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPKNVELYN 325

Query: 263 -IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FHA+ +P   L AN    +   + +  ++ ++  K SKS G  I   +  + 
Sbjct: 326 FVGKDNVAFHAVMFPCSQLGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFG-DAAQG 384

Query: 320 VGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            G+  D  R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G+I
Sbjct: 385 TGIPADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVSNFFGGVI 444

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P     T++D   L   ++  ++  +      +  A+  ++++    ++Y  AQ PW L 
Sbjct: 445 PEI-QLTDADAEFLEEVNKECEQWDKQFDRVHLKDAVKSILNVSRLGNQYMQAQTPWVLM 503

Query: 438 KTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           K + +   RA T++ V   +   LA++L   +P ++  I
Sbjct: 504 KGSDEEKKRAGTIIGVAANIAYHLAVILYPVMPSISATI 542


>gi|42526573|ref|NP_971671.1| methionyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|68565989|sp|Q73NT9|SYM_TREDE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|41816766|gb|AAS11552.1| methionyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 793

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/507 (22%), Positives = 210/507 (41%), Gaps = 43/507 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +++A+ Y N  PH+G+  +++ ADV ARF RL   + L+  GTDE+G      A     +
Sbjct: 6   VTSALPYVNNFPHLGNLIQVLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEKKS 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +           ++ +  +I++D F RT+  +  +  + ++  +   G I +      Y
Sbjct: 66  PEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQLY 125

Query: 129 SLRDEAYYNDDEV--------YKGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               + +  D  V        Y GA G   ++     +P    E        +       
Sbjct: 126 CPSCKRFLADRYVLGTCPSCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGAAPEVRSTT 185

Query: 178 SYYESHPEFILPIER-----------RNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD 223
             Y + P+ +   E+            N  +   KS L+D    R   +   WGI +P  
Sbjct: 186 HLYINLPKIVPEYEKWMPKTAEEGRWSNNALQMSKSWLRDGLQERAITRDLKWGIPVPKK 245

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYW 275
                + YVW DA   Y++ T    +  G   K W  D         IGKD + FH + +
Sbjct: 246 GFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFHTVIF 305

Query: 276 PAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332
           P  L+ +     K     G  ++ ++  K SKS G  +   +  E  +  D  R+++   
Sbjct: 306 PCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFYIFYN 365

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D  +     ++RVN++L   + NLV+R+ + I + YDG IP         E I S
Sbjct: 366 RPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFIHRYYDGKIPQVDGAKSGREDIKS 425

Query: 393 V-------CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +        S   ++I E      +  +  +  +L S  ++ F   +PW+ ++T+P+ A 
Sbjct: 426 MVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRRETDPEYAE 485

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++     +I+ + IL+  ++P+ A++
Sbjct: 486 ALMSELCYLIKDILILIHPYMPQYADQ 512


>gi|225554399|gb|EEH02697.1| methionyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 596

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 228/518 (44%), Gaps = 48/518 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV ARF R  G+  L+  GTDE+G      A
Sbjct: 17  KRNVLITSALPYVNNVPHLGNIIGSVLSADVFARFCRGRGIPTLYIGGTDEYGTTTEAKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+      ++    DIS+D F RTT +   D  + +++K+ + G + + 
Sbjct: 77  LIEKCTPRELCDKYHAIHAEIYQWFDISFDIFGRTTTQLQTDITQDIFRKLYNNGFLKER 136

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWMEE----EGY-- 165
             +  Y    +++  D  V        Y  A G   +       P+Q        +G+  
Sbjct: 137 MTTQLYCQEHQSFLADRFVEGECPTCSYTDARGDQCDMCGQLLEPLQLKNPRCKIDGFAP 196

Query: 166 --------FFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                   F  L   Q ++  Y+ ++      P   ++  ++++K GL+  S++R    W
Sbjct: 197 ITKDTKHIFLELDKLQPEVEDYFRKASTNGAWPNNGKSITLAWLKEGLQPRSITRD-MKW 255

Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267
           G ++P  P Y   ++Y W DA   Y++ T  Y D  +    K+W  P D+ +   IGKD 
Sbjct: 256 GTQVPL-PGYEDKVIYSWFDACIGYVSITAKYTDQWE----KWWRNPEDVQLYQFIGKDN 310

Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH++ +PA  +    P  K   + +  ++ ++G K SKS G  V         V  D 
Sbjct: 311 VVFHSVIFPATQVGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQQTGVSADV 370

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAF 383
            RY+L+       D  +  D      N+ L N +GN  SR +  +  + Y+ ++P    +
Sbjct: 371 WRYYLLSRRPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRFYNNIVPDWTKY 430

Query: 384 TESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
            E    I     +R+L +  E +    +   LA  + +  + + +    K   +L ++ P
Sbjct: 431 HEPSFEIWKEEINRLLTKYVEELDAVKLRAGLATALHISQQGNLFLQTNKLDGKLHESEP 490

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + + V+ +TV +I  LA ++  ++P  +  I   L V
Sbjct: 491 AKCAAVIGLTVNLIHLLASVIAPYMPATSKSICTQLRV 528


>gi|225024824|ref|ZP_03714016.1| hypothetical protein EIKCOROL_01711 [Eikenella corrodens ATCC
           23834]
 gi|224942427|gb|EEG23636.1| hypothetical protein EIKCOROL_01711 [Eikenella corrodens ATCC
           23834]
          Length = 463

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAD 69

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKNV-----SGSALLAKLAAESDNIAEQYENREYARALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K     +R   V    +     L   L   +P+ A
Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284


>gi|294670986|ref|ZP_06735842.1| hypothetical protein NEIELOOT_02692 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307473|gb|EFE48716.1| hypothetical protein NEIELOOT_02692 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 463

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++V ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEKGLNPEWMRYYIVAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKDV-----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K     +R   V    +     L   L   +P+ A
Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284


>gi|328769498|gb|EGF79542.1| hypothetical protein BATDEDRAFT_12267 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 647

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 217/511 (42%), Gaps = 42/511 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV AR+ R+ G +VLF  GTDE+G     
Sbjct: 3   KNERNVLITSALPYVNNIPHLGNLIGSVLSADVYARYSRIRGENVLFICGTDEYGTATET 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K   D+  +   +      I +D F RT  ++     + ++ K+   G + 
Sbjct: 63  KAIEEKLSCKQLCDKYFKFHDETYKWFQIDFDHFGRTITEQQTIITQDIYLKLEKNGHVM 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
           +   +  Y  + E++  D  V        Y+ A G   ++    +  +E           
Sbjct: 123 EDTVTQLYCNQHESFLADRFVEGTCPLCGYEDARGDQCDSCGKLLNAIELKNPRCKLDNA 182

Query: 162 ------EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                  +  F  L+  Q+KL  +++ +  E       +    S++K GLK   ++R   
Sbjct: 183 APVARDSKHLFLNLTGQQEKLTEWFKKASSEGCWSANSQTITNSWLKEGLKPRCITRD-L 241

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG  +P +     + YVW DA   Y + T    N       +W  P D+ +   +GKD 
Sbjct: 242 KWGTPVPKEGYENKVFYVWFDAPIGYFSITA---NYTKDWELWWKNPKDVKLYQFMGKDN 298

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FH + +P+ LL  N    L   + +  ++ ++  K SKS G  +    V++  + V+ 
Sbjct: 299 VPFHTVIFPSTLLGTNENWTLLHHLSTTEYLQYESGKFSKSRGVGVFGNNVVDSGIPVEV 358

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            RY+L+       D ++  +      N +L   +GN V+R V  I   YDG+IP      
Sbjct: 359 WRYYLLSIRPESGDSYFSWNSFIAANNTELLANLGNFVNRLVKFINAKYDGVIPAYKTTG 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E +  ++S  + +L +  E + +  I   L   + + +  + Y    +    L   + +R
Sbjct: 419 EPETKLISSVNTLLHQFIEALNDVKIRTGLRLFMDISARGNLYLQENRIDNSLFANSRER 478

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              V+ V   +   ++ ++  ++P  +  I 
Sbjct: 479 CDNVVAVAANLAYLISAVVYPYMPSTSEGIL 509


>gi|47570442|ref|ZP_00241078.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47552900|gb|EAL11315.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 120

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 79/118 (66%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDI
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120


>gi|288575952|ref|ZP_06394074.1| methionine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566634|gb|EFC88194.1| methionine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 462

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRTPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKH 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKDV-----SGSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K     +R   V    +     L   L   +P+ A
Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284


>gi|228968149|ref|ZP_04129152.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791541|gb|EEM39140.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 425

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 23/336 (6%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDW 216
           E E ++F L  +Q ++    E   E       R+  I     +VK GL+D ++SR     
Sbjct: 62  ETEHFYFALHTFQQQIKKVVEIAKE---KGTWRDNAIQLTERYVKEGLQDRAVSRD-LPI 117

Query: 217 GIKIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDIL 268
           G+ IP    +D +  +YVWI+A+  Y + + Y     G    +FW +D    +V GKD +
Sbjct: 118 GVPIPVKGYEDKK--IYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNI 175

Query: 269 RFHAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            FH+I WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RY
Sbjct: 176 PFHSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRY 235

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           FL       +D  +         N++L    GN V+R++  I K YDG++P      E  
Sbjct: 236 FLTVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELK 295

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           + +      + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      
Sbjct: 296 DKV----EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEET 351

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y  + +I   A LL+ F+P  + ++   L + + N
Sbjct: 352 IYNCIYLIANFANLLEPFLPFSSERVRSTLSIVNRN 387


>gi|122937774|gb|ABM68611.1| AAEL014709-PA [Aedes aegypti]
          Length = 1019

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 215/515 (41%), Gaps = 49/515 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      A    +
Sbjct: 260 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETKALAENL 319

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D+       +     I +D F RTT        + ++K +   G I        
Sbjct: 320 TPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIETRAVDQL 379

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161
              + + Y  D  V          Y+ A G   +A    +  +E                
Sbjct: 380 LCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCNTSPIIR 439

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +F  L   + KL  + +   E       R    +++K GLK   ++R    WGI +
Sbjct: 440 QSSQFFLDLPKIEPKLREWVDKA-EHGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPV 497

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLH-VIGKDILRFH 271
           P +     + YVW DA   Y++ T           ++W        DL+  + KD + FH
Sbjct: 498 PLEGYEDKVFYVWFDAPIGYISMTSRYSK---EWKQWWQPSAETKVDLYQFMAKDNVPFH 554

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
           ++ +PA L+  +    L   + +  ++ ++  K SKS G  V         +  D  R++
Sbjct: 555 SVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWRFY 614

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L      G+D  +  + L  R N +L   +GN V+R++    K +D +IP P    E D 
Sbjct: 615 LCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEEDF 673

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445
           ++L++ +R L+     M+   +   +  ++ +    ++   A++PW L K   D   RA 
Sbjct: 674 TLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTRAG 733

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           TV+ +   +   LA L+  F+P  A  ++  L V+
Sbjct: 734 TVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVS 768


>gi|255065400|ref|ZP_05317255.1| methionine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255050225|gb|EET45689.1| methionine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 462

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        S  ++L+  +     I E  +N+   RAL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKDV-----SGSALLAKLAAESSAIAEQYENREYARALRDIMALADAVNEYVDANK 244

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K     +R   V    +     L   L   +P+ A
Sbjct: 245 PWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTA 284


>gi|157105436|ref|XP_001648869.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108869023|gb|EAT33248.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 966

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 215/515 (41%), Gaps = 49/515 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      A    +
Sbjct: 260 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETKALAENL 319

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D+       +     I +D F RTT        + ++K +   G I        
Sbjct: 320 TPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIETRAVDQL 379

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161
              + + Y  D  V          Y+ A G   +A    +  +E                
Sbjct: 380 LCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCNTSPIIR 439

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +F  L   + KL  + +   E       R    +++K GLK   ++R    WGI +
Sbjct: 440 QSSQFFLDLPKIEPKLREWVDKA-EHGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPV 497

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLH-VIGKDILRFH 271
           P +     + YVW DA   Y++ T           ++W        DL+  + KD + FH
Sbjct: 498 PLEGYEDKVFYVWFDAPIGYISMTSRYSK---EWKQWWQPSAETKVDLYQFMAKDNVPFH 554

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
           ++ +PA L+  +    L   + +  ++ ++  K SKS G  V         +  D  R++
Sbjct: 555 SVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWRFY 614

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L      G+D  +  + L  R N +L   +GN V+R++    K +D +IP P    E D 
Sbjct: 615 LCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEEDF 673

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445
           ++L++ +R L+     M+   +   +  ++ +    ++   A++PW L K   D   RA 
Sbjct: 674 TLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTRAG 733

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           TV+ +   +   LA L+  F+P  A  ++  L V+
Sbjct: 734 TVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVS 768


>gi|157106644|ref|XP_001649418.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108868809|gb|EAT33034.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 966

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 215/515 (41%), Gaps = 49/515 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      A    +
Sbjct: 260 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETKALAENL 319

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D+       +     I +D F RTT        + ++K +   G I        
Sbjct: 320 TPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIETRAVDQL 379

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161
              + + Y  D  V          Y+ A G   +A    +  +E                
Sbjct: 380 LCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCNTSPIIR 439

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +F  L   + KL  + +   E       R    +++K GLK   ++R    WGI +
Sbjct: 440 QSSQFFLDLPKIEPKLREWVDKA-EHGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPV 497

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLH-VIGKDILRFH 271
           P +     + YVW DA   Y++ T           ++W        DL+  + KD + FH
Sbjct: 498 PLEGYEDKVFYVWFDAPIGYISMTSRYSK---EWKQWWQPSAETKVDLYQFMAKDNVPFH 554

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYF 328
           ++ +PA L+  +    L   + +  ++ ++  K SKS G  V         +  D  R++
Sbjct: 555 SVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWRFY 614

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L      G+D  +  + L  R N +L   +GN V+R++    K +D +IP P    E D 
Sbjct: 615 LCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEEDF 673

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445
           ++L++ +R L+     M+   +   +  ++ +    ++   A++PW L K   D   RA 
Sbjct: 674 TLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTRAG 733

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           TV+ +   +   LA L+  F+P  A  ++  L V+
Sbjct: 734 TVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVS 768


>gi|297692235|ref|XP_002823470.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 900

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 225/512 (43%), Gaps = 55/512 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNLIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLKRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V     +  F  L   + +L  +   + P        R  + S+++ GLK   ++R    
Sbjct: 443 VV-QSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LK 500

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDI 267
           WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V     + KD 
Sbjct: 501 WGTPVPLEGFEDKVFYVWFDATFGYLSITANYTDQWE----RWWKNPEQVDLYQFMAKDN 556

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +  D 
Sbjct: 557 VPFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADI 616

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T
Sbjct: 617 WRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE-MVLT 675

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPD- 442
             D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+ +K +  D 
Sbjct: 676 PDDKRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADR 735

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 736 QRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|13940612|gb|AAK50414.1|AC021891_15 Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 596

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/527 (23%), Positives = 232/527 (44%), Gaps = 64/527 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + +++A+ Y N  PH+G+    ++ AD  AR+ RL G +VL+  GTDE+G      A
Sbjct: 14  RRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G + +   D+     +++ +  DIS+D F RT+  +  + C+ ++ K+ D   + + 
Sbjct: 74  MEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWLSEN 133

Query: 123 CYSGWYSLRDEAYYNDD--EVYKGADGQYYNAQH-----------NPVQWM--------- 160
                Y    + +  D   E Y   +G  Y++             N  + +         
Sbjct: 134 TMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKACHV 193

Query: 161 --------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLS 208
                   + +  F  L   ++KL  Y +   E  L        I    +++K GLK   
Sbjct: 194 CGSTPCVRDTDHLFLELPLLREKLEKYID---ETSLTGSWSQNAIHATNAWLKEGLKPRC 250

Query: 209 LSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---I 263
           ++R    WG+ +P +     + YVW DA   Y++ T     P+  K    P ++ +   +
Sbjct: 251 ITRD-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWKNPENVELYQFM 308

Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           GKD + FH + +P+ LL    N  L K +    ++ ++  K SK+ G        I   G
Sbjct: 309 GKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKG--------IGVFG 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMI 377
            DA    +  E +   D  +    L+ + N +L N +GN ++R +S I K     Y  ++
Sbjct: 361 NDAKSTNIPPEAS---DTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVV 417

Query: 378 P-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           P +P   + +  +S+     +++ +  + M    I + L   +++ SE + Y    + W+
Sbjct: 418 PDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWK 477

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           L K +P   +TV+  +V ++  LA LL+ F+P  +  +   L ++ E
Sbjct: 478 LYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPE 524


>gi|296212123|ref|XP_002752733.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Callithrix
           jacchus]
          Length = 830

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 119/516 (23%), Positives = 221/516 (42%), Gaps = 56/516 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      
Sbjct: 185 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETK 243

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +
Sbjct: 244 AMEEGLTPQEICDKYHIIHADIYRWFNISFDVFGRTTTPQQTKITQDIFQRLLARGFVLQ 303

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                    R   +  D            E  +G          N V+  + +    R  
Sbjct: 304 DTVEQLRCERCARFLADRFVEGVCPFCGFEEARGDQCDKCGKLINAVELKKPQCKVCRSC 363

Query: 171 AYQDKLLSYYESHPEFILPIERRNE-------------------VISFVKSGLKDLSLSR 211
                    +   P+    +E+R E                     S+++ GLK   ++R
Sbjct: 364 PVVKSSQHLFLDLPK----LEKRLEEWLGRTLPGSDWTPNAWFITRSWLRDGLKPRCITR 419

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----I 263
               WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V     +
Sbjct: 420 D-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVDLYQFM 474

Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320
            KD + FH I +P   L A  N  L   + +  ++ ++  K SKS G  V   +     +
Sbjct: 475 AKDNVPFHGIVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 534

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P  
Sbjct: 535 PADIWRFYLLYMRPEGQDSTFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE- 593

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKT 439
              T  D+ +L+  +  L+   + ++   I  AL  ++++    ++Y    +PW ++K +
Sbjct: 594 MVLTPDDQRLLAHVTLELRHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKQIKGS 653

Query: 440 NPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 654 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 689


>gi|194881221|ref|XP_001974747.1| GG20938 [Drosophila erecta]
 gi|190657934|gb|EDV55147.1| GG20938 [Drosophila erecta]
          Length = 1021

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 233/528 (44%), Gaps = 77/528 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQ-------------------NSRNFRDMADVLDISYDDFIRT----TEKRH 102
            +T +   D+                        ++  D++  ++ D ++     TE   
Sbjct: 316 KLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375

Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156
              C    R L  +  +    + GC  G+   R       D+  K   G+  NA     P
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425

Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206
              +       R S   D+L +   ++ P+    +++         +VI+  ++K GLK 
Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKP 482

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259
             ++R    WGI +P +   + + YVW DA   Y++ T           ++W PA+    
Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAEGTDV 538

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +
Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKRHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +E G+  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K++
Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657

Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +  +P     T  DE + L++ +R L+    +M+   +   +  ++S+    + Y  +Q+
Sbjct: 658 NSTVPE--VVTTQDELVLLALINRELRGYINSMEKAKLRDGIRHLLSISRHCNGYMQSQQ 715

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L K N D   RAST++ + V +   LA LL  ++P  A  +F  L
Sbjct: 716 PWVLLKGNDDQKARASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763


>gi|158255150|dbj|BAF83546.1| unnamed protein product [Homo sapiens]
          Length = 900

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262
             ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V 
Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547

Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315
               + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V   + 
Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G
Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P     T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+
Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726

Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|62897093|dbj|BAD96487.1| methionine-tRNA synthetase variant [Homo sapiens]
          Length = 900

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262
             ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V 
Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547

Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315
               + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V   + 
Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G
Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P     T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+
Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726

Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|14043022|ref|NP_004981.2| methionyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178332|sp|P56192|SYMC_HUMAN RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7804468|dbj|BAA95668.1| methionyl tRNA synthetase [Homo sapiens]
 gi|12803161|gb|AAH02384.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|13623455|gb|AAH06328.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|15079642|gb|AAH11639.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|15080151|gb|AAH11849.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|30583515|gb|AAP36002.1| methionine-tRNA synthetase [Homo sapiens]
 gi|60656267|gb|AAX32697.1| methionine-tRNA synthetase [synthetic construct]
 gi|307686053|dbj|BAJ20957.1| methionyl-tRNA synthetase [synthetic construct]
          Length = 900

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262
             ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V 
Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547

Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315
               + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V   + 
Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G
Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P     T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+
Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726

Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|1702932|emb|CAA64381.1| yeast methionyl-tRNA synthetase homolog [Homo sapiens]
          Length = 900

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 73/521 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 443 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262
             ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V 
Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547

Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315
               + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V   + 
Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G
Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P     T  D+ +L   +  LQ   + ++   I  AL  ++++    ++Y    +PW+
Sbjct: 668 YVPE-MVLTPDDQRLLGHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726

Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|15929104|gb|AAH15011.1| MARS protein [Homo sapiens]
          Length = 899

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 265 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 324

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 325 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 384

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 385 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 441

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 442 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 491

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262
             ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V 
Sbjct: 492 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 546

Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315
               + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V   + 
Sbjct: 547 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 606

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G
Sbjct: 607 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 666

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P     T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+
Sbjct: 667 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 725

Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 726 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 766


>gi|114644161|ref|XP_509164.2| PREDICTED: methionine-tRNA synthetase [Pan troglodytes]
          Length = 900

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 73/521 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 266 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385

Query: 126 GWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 386 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCP 442

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 443 V--VQSTQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 492

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV- 262
             ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W     V 
Sbjct: 493 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNPEQVD 547

Query: 263 ----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIE 315
               + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V   + 
Sbjct: 548 LYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMA 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G
Sbjct: 608 QDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGG 667

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P     T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+
Sbjct: 668 YVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726

Query: 436 -LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 767


>gi|294659971|ref|XP_002770677.1| DEHA2G20262p [Debaryomyces hansenii CBS767]
 gi|199434371|emb|CAR66009.1| DEHA2G20262p [Debaryomyces hansenii]
          Length = 755

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 225/524 (42%), Gaps = 55/524 (10%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE E+ + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G    
Sbjct: 190 KENERNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNALFICGTDEYGTATE 249

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    +T K   D+  +  +D+ D  DI +D F RTT  +  +  + ++ K+ D G +
Sbjct: 250 TKALEEKITPKQLCDKYHKIHKDVYDWFDIGFDYFGRTTTSQQTEIAQDIFMKLFDNGYL 309

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH----------NPVQWMEEEGYFFR 168
            +      Y     A+  D  V       QY +A+           NP + +       R
Sbjct: 310 EEKTTEQLYCQEHNAFLADRFVEGTCPKCQYEDARGDQCDKCGSLLNPFELVNP-----R 364

Query: 169 LSAYQDKLLSYYESH---------PEFILPIERRNE-----------VISFVKSGLKDLS 208
                 K +    +H         PE    +E  +E             S++K GL+   
Sbjct: 365 CKVDNAKPIPRNSTHIYIKLDDLEPELKAWVEEASEKGAWSKNSKTITNSWLKQGLEPRC 424

Query: 209 LSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW--PADL-- 260
           ++R    WG  +P +     ++YVW DA   Y++ T   + DN      K+W  P ++  
Sbjct: 425 ITRDLI-WGTPVPLEKFKDKVLYVWFDATIGYVSITANYFKDNKTEDWKKWWRNPENVDL 483

Query: 261 -HVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEV 316
              +GKD + FH + +PA  +    N      + +  ++ ++  K SKS G  V      
Sbjct: 484 YQFMGKDNVPFHTVVFPASQIGTKDNWTKLHHLNTTEYLQYENGKFSKSRGVGVFGNNAK 543

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              +     RY+L        D  +       + N++L   +GN V+R V  ++  Y+G+
Sbjct: 544 ETNISPSVWRYYLASVRPESSDSHFSWTEFVTKNNSELLANLGNFVNRLVKFVIAKYNGV 603

Query: 377 IPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P   P    + ++    + +++L    ENM+   + R L   +S+ S  +++    K  
Sbjct: 604 VPEFDPKNIPDYNKFNTEI-NQLLANYIENMEAVNLRRGLEIAMSISSRGNQFLQDNKLD 662

Query: 435 ELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               TN PD++  V+ V + +I  ++ ++  F+P+   +I  +L
Sbjct: 663 NNLYTNLPDKSDAVMGVGLNLIYLVSAIISPFMPECTTQICQVL 706


>gi|284799512|ref|ZP_06390190.1| methionine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284798091|gb|EFC53438.1| methionine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 463

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAD 69

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKDV-----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANK 244

Query: 433 PWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K      R   V    +     L   L   +PK+A
Sbjct: 245 PWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPKVA 284


>gi|195426788|ref|XP_002061477.1| GK20695 [Drosophila willistoni]
 gi|194157562|gb|EDW72463.1| GK20695 [Drosophila willistoni]
          Length = 1016

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/521 (22%), Positives = 223/521 (42%), Gaps = 63/521 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+       +     I +D F RTT +   +  +  +K +   G I      
Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTHQEQTEIVQEAFKDVHSAGYIITESVE 375

Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME-------------- 161
                + + +  D  V          Y+ A G   +     V   E              
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSAPV 435

Query: 162 ---EEGYFFRLSAYQDKLLSYYE------SHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
               +  F  L   + KL  + +      +H   ++         ++++ GLK   ++R 
Sbjct: 436 LRSSDQLFIDLPKAEPKLREWVDKADNGWTHNARVI-------TRAWLREGLKPRCITRD 488

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVI 263
              WGI +P     + + YVW DA   Y++ T           ++W PA          +
Sbjct: 489 -LKWGIPVPHAGFEKKVFYVWFDAPFGYVSMTKRYTK---DYQQWWQPAKGTDVELFQFM 544

Query: 264 GKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  +E G
Sbjct: 545 AKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETG 603

Query: 322 V--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K+++ ++P 
Sbjct: 604 IPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSLVPE 663

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438
               T+ +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K 
Sbjct: 664 V-VLTQDELILLALINRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKG 722

Query: 439 --TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             T   RA+T++ ++  +   LA LL  ++P  A  +FD L
Sbjct: 723 DETQKKRAATIIGLSANIACLLANLLFPYMPSTARTLFDQL 763


>gi|67521846|ref|XP_658984.1| hypothetical protein AN1380.2 [Aspergillus nidulans FGSC A4]
 gi|40746054|gb|EAA65210.1| hypothetical protein AN1380.2 [Aspergillus nidulans FGSC A4]
 gi|259488283|tpe|CBF87610.1| TPA: methionyl-tRNA synthetase (AFU_orthologue; AFUA_1G09010)
           [Aspergillus nidulans FGSC A4]
          Length = 658

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 223/514 (43%), Gaps = 43/514 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGHPTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQKHTEISQAIFKRLYDNGYLA 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163
           +      Y     ++  D  V        Y  A G Q     H        NP   ++  
Sbjct: 131 EKTAEQPYCETHGSFLADRYVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKLDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E ++LP           RN   ++++ GLKD  ++R   
Sbjct: 191 TPVKRDTKHIHLLLDKLQPEIEKYVLPAMEKGEWPKNSRNITENWLREGLKDRGITRD-L 249

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGKDILR 269
            WG+ +P D     ++YVW +A   Y + T     PD       P D+ +   +GKD + 
Sbjct: 250 KWGVPVPLDGFDNKVLYVWFEACIGYPSITANY-TPDWELWWRNPEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHSVIFPGCQLGTKEKWTMLHHLNTAEYLNYEGGKFSKSRGIGVFGNNAKETGVAPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-- 384
           Y+L++      D  ++        N++L   +GNLV+R V ++   Y   IP    FT  
Sbjct: 369 YYLLKNRPETGDTQFEWRSFVDSNNSELLAKLGNLVNRVVKLVAASYGSTIPD---FTVP 425

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           ES +  L   + +L++  E M+   +   ++  + +    +    A +    L    P+R
Sbjct: 426 ESFQPTLDEVTGLLRQYVEEMEGVHLRAGVSTAMKIAEAGNGLIQANRLDNSLIANEPER 485

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A+ V+   + +I  LA +   ++P  +  I + L
Sbjct: 486 AAAVVGTVLNLIHLLASVFAPYLPATSKSINEQL 519


>gi|194375956|dbj|BAG57322.1| unnamed protein product [Homo sapiens]
          Length = 635

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 234/525 (44%), Gaps = 74/525 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L I++A+ Y +  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      
Sbjct: 29  ERNVL-ITSALPYVSNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETK 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +
Sbjct: 88  ALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQ 147

Query: 122 GCYSGWYSLRDE--AYYNDDEVYKGAD----------------GQYYNA----------- 152
                   LR E  A +  D   +G                  G+  NA           
Sbjct: 148 DTVE---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVC 204

Query: 153 QHNPVQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKS 202
           +  PV  ++   + F        RL  +  + L  S +  + +FI          S+++ 
Sbjct: 205 RSCPV--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRD 254

Query: 203 GLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWP-- 257
           GLK   ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    ++W   
Sbjct: 255 GLKPRCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----RWWKNP 309

Query: 258 --ADLH-VIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVI 311
              DL+  + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  V 
Sbjct: 310 EQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVF 369

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
             +     +  D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K
Sbjct: 370 GDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSK 429

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            + G +P     T  D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    
Sbjct: 430 FFGGYVPE-MVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVN 488

Query: 432 KPWE-LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +PW+ +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 489 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 533


>gi|269214174|ref|ZP_06158403.1| methionine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144326|gb|EEZ70744.1| methionine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 463

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 15/280 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD 259
           ++ L D  +SR    +G +IPD P    YVW+DA   Y+ +   L +  G    +++ AD
Sbjct: 10  ETTLSDWDISRDAPYFGFEIPDAPSKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAD 69

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
                 H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I   
Sbjct: 70  SQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAK 129

Query: 315 EVIEE-VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +E+ +  + +RY++  ++    +D   +      RVN+DL     N+ +R+   I K 
Sbjct: 130 SYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKR 189

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           ++G +        +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA K
Sbjct: 190 FEGRLKDV-----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANK 244

Query: 433 PWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           PWEL K      R   V    +     L   L   +PK+A
Sbjct: 245 PWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPKVA 284


>gi|297242583|ref|ZP_06926522.1| methionyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889392|gb|EFH28125.1| methionyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 520

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 40/348 (11%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VKSGLKDLSLSRKTFDWG 217
           E E YF  L A  +  +++  S   +      R  VI+F   + + +K  +++R   DWG
Sbjct: 81  ETEHYFLDLPALAEANVNWLHSREGW------RTNVINFSLGLFNEVKPRAITRD-IDWG 133

Query: 218 IKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPAD-----LHVIGK 265
           I +P     D+P   +YVW DA+  YL+ +       G    +  W  D      + +GK
Sbjct: 134 IPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMGK 193

Query: 266 DILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G VI
Sbjct: 194 DNITFHSQIWPSEMLAYNGAGSKGGEAGVYGPLNMPEQVVASEFMTMEGKKFSSSRGIVI 253

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K
Sbjct: 254 YVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLINK 313

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++ G+IP     + T  D ++L   S     +   ++      AL + + +V+++++Y  
Sbjct: 314 NF-GVIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKYIS 372

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A +PW++K  +  R  TVL+V  + +     LL  F+P  A K+++ L
Sbjct: 373 ATEPWKIKD-DEARLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEAL 419


>gi|320187431|gb|EFW62121.1| Methionyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 326

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 38/314 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G 
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRF 270
           +IP+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ F
Sbjct: 242 EIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYF 301

Query: 271 HAIYWPAFLLSANL 284
           H+++WPA L  +N 
Sbjct: 302 HSLFWPAMLEGSNF 315


>gi|149198175|ref|ZP_01875222.1| methionyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138777|gb|EDM27183.1| methionyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 712

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 235/518 (45%), Gaps = 48/518 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K  I++A+ Y N +PH+G+    ++ AD  ARF R    + L+  GTDE+G      A 
Sbjct: 3   KKRLITSALPYVNNEPHLGNLIGCVLSADCFARFSRSCDYETLYICGTDEYGTATETKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +   D+     + + D  +I +D F RT+   H  T + ++++++ K D +K  
Sbjct: 63  QEGLSPREICDKYHVIHKKIYDHFNICFDAFGRTSTDIHTQTVQEIFEQVA-KEDHFKVV 121

Query: 124 YS-GWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWMEEEGYFFRLSA 171
            +  +YS     +  D  +        Y  A G   +   A   P + ++ +    + + 
Sbjct: 122 ENEQFYSESMNKFLADRLINGTCPKCGYDDARGDQCDGCGALLTPTELIDPKCSVDKSTP 181

Query: 172 YQDKLLSYYESHPEFILPIER-RNEVI--------------SFVKSGLKDLSLSRKTFDW 216
              K    +   PE    +E  +N  I              S++K GL+  +++R    W
Sbjct: 182 VLRKTKHLHLKLPELSSDLEAWQNHSIEAGHWPNNADTTTRSWMKRGLESRAITRD-LKW 240

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD------LHVIGKDI 267
           G+ +P +     + YVW DA   Y++ T G    PD    K+W  D         + KD 
Sbjct: 241 GVPVPYEGFTDKVFYVWFDAPIGYVSITRGAF--PD--TWKYWWHDPDNTQLFQFMAKDN 296

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FH++ +PA  +++     +   + S  ++ ++  K SKS    +   +VIE  + VD 
Sbjct: 297 IPFHSVIFPATQIASGDKWTMCHHLASTEYLNYEDTKFSKSRNIGVFGSDVIESGIDVDL 356

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+      +D  +       +VN +  + IGNLV+RS+    K++ G I    A T
Sbjct: 357 WRFYLLAIRPEKQDSAFTWQEFFDKVNNEFLDNIGNLVNRSLVYANKNFSGPIELCEA-T 415

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPDR 443
           E+     +    +++EI +  +      A+   + L    +++F  ++PW ++K+   + 
Sbjct: 416 ETQTEFKNKAQELIKEITQAYEACSFREAIRLTLILGKLGNKFFQDEEPWVKIKEGKDEE 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             + + + V ++R ++ILL   +P  ANKI   + + D
Sbjct: 476 VRSAINILVHLVRDISILLSPAMPNTANKIQSFIGLKD 513


>gi|263514338|sp|C4V943|SYMC_NOSCE RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
          Length = 560

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 225/528 (42%), Gaps = 58/528 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N QPH+G+    ++ AD+ ARF R +  DV+F +GTDE+G  I  AA  
Sbjct: 8   KKIITSALPYVNNQPHLGNIIGCVLSADMYARFCRKNNEDVVFLSGTDEYGTAIEMAAFA 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              T     ++N    + + D  +I +D F  TT   H    +  + KI + G   +   
Sbjct: 68  QNKTPLQICEENRIIHKKIYDWFNIDFDFFGHTTSTAHTKNVQDFFNKIHNNGFFTEQEI 127

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ-----------------HNPVQW 159
             ++  + + +  D  V        Y  A G   +                   H+    
Sbjct: 128 EQFFCDKCQIFLADRYVVGTCKFCKYTDAKGDQCDGCGHTYKSLDLIDAKCTLCHSFPNI 187

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGI 218
                 FF  + ++DKL   + ++ ++      +    S++   L    ++R   + WG+
Sbjct: 188 KSTRHLFFDFNNFKDKLQKLFNTNSQY-WSENGKQITKSWLDQELLPRCMTRDLKNRWGV 246

Query: 219 KIP--DDPQYIMYVWIDALTNYLT-----TTGYLDNPDGSKAKFWPAD--------LHVI 263
            +P  D  + + YVW DA+  Y T          ++ +  K   +  D        +  +
Sbjct: 247 PVPLKDFEEKVFYVWFDAVIGYFTFYKEYVAARSESKELDKNNVFATDNILQDCELVQFM 306

Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-V 320
           GKD + FH I +P+ + + N   PL KK+    F+L + EK SKS G+ I  +++++  +
Sbjct: 307 GKDNVFFHTIVFPSLIFATNDSYPLIKKLSVTEFLLFENEKFSKSRGHGIFGLDLVDNTM 366

Query: 321 GVDAL-RYFL--VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           G   L RY+L  +R   C  D  +        ++ADL N IGN  +R +  I    D +I
Sbjct: 367 GQSCLWRYYLAKIRPEKC--DSNFSFTHFTNVIDADLNNNIGNFCNRVLKYIKNKNDKLI 424

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            +       D+ ++    ++ +E   +     I  AL +++ +    + Y   Q+    K
Sbjct: 425 -SIDKLEHRDDLMVQTIDKIYKEYLTSFSAIRIREALEKILEISKVGNEY--VQQVVSSK 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
              P +   V +  V +I Q   LL+ F+P  + K+  +     EN C
Sbjct: 482 IEVP-KGFQVAFSIVVLIGQ---LLEPFIPVSSEKLLKMCNRKKENFC 525


>gi|307173500|gb|EFN64410.1| Methionyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 934

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 231/522 (44%), Gaps = 45/522 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + +++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+ +GTDE+G     
Sbjct: 223 KGERNILVTSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYISGTDEYGTATEA 282

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +V  D+      D+     I +D F RTT     +  +  + +I  +G + 
Sbjct: 283 KALQEKTTPQVICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQAFFLRIKSQGYVS 342

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--NPVQWMEEEGYFFRL 169
                  +    + +  D  V        Y+ A G Q     H  N V+ +         
Sbjct: 343 SETVEQLHCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLVNAVELINPRCKMCNT 402

Query: 170 SAYQDKLLSYYESHP-------EFILPIER------RNEVISFVKSGLKDLSLSRKTFDW 216
                  + ++   P       E+ + +E+      R    S+++ GLK   ++R    W
Sbjct: 403 RPVIKNSIQFFLDLPKIEKRLKEYSITVEKEWSSVARAVSKSWLRDGLKPRCITRD-LKW 461

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA------DL-HVIGKDI 267
           GI +P +     + YVW DA   Y++ T           K+W        DL   + KD 
Sbjct: 462 GIPVPIEGFENKVFYVWFDAPFGYISITKRYTK---EYKKWWQPLQDTKIDLCQFMAKDN 518

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FHAI +PA+LL+A  N  L K + +  ++ ++ +K SKS G  +   +  +  +  D 
Sbjct: 519 VPFHAIMFPAYLLAANQNYTLIKYLMATEYLNYEDKKFSKSRGIGVFGTDARDTGIPADV 578

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L       +D  ++   L  + N++L N +GN V+R++    K ++  +P P    
Sbjct: 579 WRFYLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRALVFSEKFFNSTVP-PIEAE 637

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKT--NP 441
           E+D ++L++  R L      M+   +   L  ++++    ++Y   Q+PW ++K T  N 
Sbjct: 638 EADWTVLALAQRELSCYINAMEQAKLRDGLKYILAISKHGNQYMQFQQPWVKVKGTDDNK 697

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            RA TV+ +   +   L+ LL  F+P  A ++   L +++++
Sbjct: 698 KRAGTVIAICCNLACLLSALLAPFMPSTAKQLRSQLGLSNKS 739


>gi|260803681|ref|XP_002596718.1| hypothetical protein BRAFLDRAFT_78382 [Branchiostoma floridae]
 gi|229281977|gb|EEN52730.1| hypothetical protein BRAFLDRAFT_78382 [Branchiostoma floridae]
          Length = 579

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 131/553 (23%), Positives = 230/553 (41%), Gaps = 82/553 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ ADV +R+ RL G + L+  GTDE+G      A 
Sbjct: 32  KNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYCRLRGWNALYICGTDEYGTATETRAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+      D+    +I +D F RTT  +  +  + ++ ++  +  +    
Sbjct: 92  EEGLTPQQICDKYHALHADIYRWFNIDFDFFGRTTTPQQTEIAQDIFWRLHQRDHLLTDT 151

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPV 157
                  + + +  D  V        Y+ A G   +                     +PV
Sbjct: 152 VDQLLCEKCDRFLADRFVEGTCPLCNYEDARGDQCDKCGKLIVATELKKPRCKVCSASPV 211

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-----RNEVISFVKSGLKDLSLSRK 212
                   F  L   + KL  + E     ILP +      R    ++++ GLK   ++R 
Sbjct: 212 V-KTSTHLFLNLPQIEPKLSGWLEE----ILPSDSWSSNARVITRTWLRDGLKPRCITRD 266

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGK 265
              WG  +P     + + YVW DA   YL+ T    N      K+W  P ++   + + K
Sbjct: 267 -LQWGTPVPLKGFTEKVFYVWFDAPIGYLSITA---NYTDQWEKWWKNPDEVTLYNFMAK 322

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH++ +P  LL A  N  L   + +  F+ ++  K SKS G  V         +  
Sbjct: 323 DNVPFHSVVFPCSLLGAEDNYTLVNHLQATEFLNYEDGKFSKSRGIGVFGDDAKDTSIPA 382

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+      +D  +  + L  + N++L N +GN +  ++  +  D D        
Sbjct: 383 DIWRFYLLYVRPENQDTTFSWEDLMVKHNSELLNNLGNFIYSTIPTM--DLD-------- 432

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             ESD  +L+  +R LQ    NM+   +   L  ++++    ++Y  A KPW L K    
Sbjct: 433 --ESDTEMLAQVNRELQMYNFNMERVRLREGLTTILNISRLGNQYIQASKPWVLLKGTEQ 490

Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKI-------FDILFVADENRCFQSLDQR 492
              RA TV+ +   +   L++LL  ++P ++ +I        D+  V D   C       
Sbjct: 491 ERARAGTVVGLCANIACVLSVLLHPYMPDISTQIQAQLAAPVDVNVVGDRLVC------H 544

Query: 493 LKPGFMLHKTFDP 505
           L PG   HK   P
Sbjct: 545 LAPG---HKIGQP 554


>gi|68006554|ref|XP_670411.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56485641|emb|CAI03621.1| hypothetical protein PB301256.00.0 [Plasmodium berghei]
          Length = 233

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 74/125 (59%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+TAI Y N +PHIGHAYE+++AD LAR+HR  G DV FTTG DEHG KIA  A
Sbjct: 109 KNDNFYITTAINYVNGEPHIGHAYEIVLADTLARYHRNLGRDVFFTTGADEHGLKIANQA 168

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D N   F+ +   L  + D ++RTT   H    + +W K    GDIY G
Sbjct: 169 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVKNGDIYLG 228

Query: 123 CYSGW 127
            Y GW
Sbjct: 229 EYEGW 233


>gi|167519384|ref|XP_001744032.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777994|gb|EDQ91610.1| predicted protein [Monosiga brevicollis MX1]
          Length = 616

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 237/516 (45%), Gaps = 58/516 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++A+ Y N  PH+G+    ++ ADV ARF R  G  VLF  GTDE+G      A   
Sbjct: 21  ILVTSALPYVNNVPHLGNIIGCVLSADVYARFARNQGHTVLFVCGTDEYGTATETKALAE 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+     + + +  +IS+D F RT+     + C+ ++KK    G + +    
Sbjct: 81  GMTPREICDKYHAIHKGVYEWFNISFDHFGRTSTPLQTEICQDIFKKCYANGFVQQKDEQ 140

Query: 126 GWYSLRDEAYYND--------DEVYKGADG--------------------QYYNAQHNPV 157
            WY    E +  D        D  Y  A G                    +Y    +   
Sbjct: 141 QWYCTSCETFLADRFVEGICPDCGYDDARGDQCDECGHTFDAIKLKSPRCRYRKDCNKAP 200

Query: 158 QWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +       + +L   Q     +Y ES+ +       ++   ++   GL+  +++R    W
Sbjct: 201 ELRTSRHLYLQLDKLQPLTEKWYAESNDKHAWSKIAQDISRNWFNMGLEARAITRD-LKW 259

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           GI +P +   + + YVW DA   Y++ T  Y D  +    ++W  P ++ +   + KD +
Sbjct: 260 GIPVPLEGFTEKVFYVWFDAPIGYISITANYTDQWE----QWWKNPENVELFQFMAKDNV 315

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325
            FH+I +P+ LL++  N  +   + +  ++ ++G + SKS G  V         +  D  
Sbjct: 316 PFHSIVFPSALLASQDNWTMLNHLNAVQYLNYEGTQFSKSRGVGVFGDSARDSGLAADVY 375

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+       D  +D + L  + N +L N +GN  +R++S   + +DG +P       
Sbjct: 376 RFYLLYMRPEASDANFDWEDLVAKHNNELLNNLGNFANRALSFCKRFFDGKVPK----IA 431

Query: 386 SDESILSVCSRVLQEIR---ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            D++ +   ++V  E+R   E M++Q+ I  A+  ++S+    ++Y  +  PW+L K NP
Sbjct: 432 LDDTAVEAVAQVNTELRAYTEGMESQVRIRDAIRGILSVSRIGNQYLQSTMPWKLVK-NP 490

Query: 442 D---RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   +A +++ V + +   +A++L+  +P  A ++ 
Sbjct: 491 ETAAQAGSIVGVVLNLTYLIALMLEPIMPDTAQELL 526


>gi|332022780|gb|EGI63053.1| Methionyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 977

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 230/526 (43%), Gaps = 52/526 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+  GTDE+G     
Sbjct: 260 KGERNMLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYICGTDEYGTATEA 319

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +   D+      D+     I +D F RT+     +  +  + KI  +G + 
Sbjct: 320 KALQEKMTPQAICDKFFDIHNDIYRWFGIGFDYFGRTSTPEQTEIVQAFFLKIKSQGYVL 379

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
                  +    + +  D  V        Y+ A G   +   + V  +E           
Sbjct: 380 TETVEQLHCEFCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLVNAVELINPRCKICNI 439

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKT 213
                    +F  L   ++KL  Y  +  +    + R   V+S  +++ GL+   ++R  
Sbjct: 440 KPVVKNSVQFFLDLPKLEEKLKEYSTTRDKGWSNVAR---VVSKAWLRDGLQPRCITRD- 495

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLD-------NPDGSKAKFWPADLH-VI 263
             WGI +P +     + YVW DA   Y++ T            P     K    DL+  +
Sbjct: 496 LKWGIPVPVEGFEHKVFYVWFDAPFGYISITKRYTKEYKQWWQPPSQDIKI---DLYQFM 552

Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-V 320
            KD + FH I +PA LL+AN    L K + +  ++ ++ +K SKS G  +   +  +  +
Sbjct: 553 AKDNIPFHTIMFPACLLAANQNYTLMKCILATEYLNYEDKKFSKSRGIGVFGTDARDTGI 612

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L       +D  ++   L  + N++L N +GN V+R++    K +D  IP P
Sbjct: 613 PADVWRFYLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRALVFCEKFFDSNIP-P 671

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               E+D ++L++  R L      M+   +   L +++++    ++Y   Q+PW   K N
Sbjct: 672 IEPEEADWTVLALVQRELSAYINAMEQGKLKDGLKRILAISKHGNQYMQFQQPWVKIKGN 731

Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D   +A TV+ +   +   L+ LL  F+P +A ++   L ++++N
Sbjct: 732 DDNKKKAGTVVAICCNLACLLSALLAPFMPNIAKQLRSQLGLSNKN 777


>gi|268536458|ref|XP_002633364.1| C. briggsae CBR-MRS-1 protein [Caenorhabditis briggsae]
 gi|187034452|emb|CAP26269.1| CBR-MARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 921

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 219/515 (42%), Gaps = 52/515 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      A
Sbjct: 34  KRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETKA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G T +   D+     + + +   I +  F RTT     + C+ ++ K+   G     
Sbjct: 94  LQEGCTPRELCDKYHAIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFLKLHKNGFTTTQ 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--DKLLSYY 180
                +  + + +  D  V     G   N  ++  +  + +G    ++A +  D      
Sbjct: 154 TVDQLFCNQCDKFLADRFVT----GTCPNCAYDDARGDQCDGCGKLINAVELKDAKCHMC 209

Query: 181 ESHPE------FILPIERRNEVI------------------------SFVKSGLKDLSLS 210
           +S PE        L +++  E                          S+   GL+   ++
Sbjct: 210 KSTPEVKQSTHIFLSLDKLQESTMDLIMKQMDLPGSKWSANAKGITKSWENQGLEPRCIT 269

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV---IGK 265
           R    WG  +P +   + + YVW DA   YL+ T  +   D +K    P+++ +   +GK
Sbjct: 270 RD-LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPSNVELYNFVGK 328

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322
           D + FH + +P   + AN    +   + +  ++ ++  K SKS G  I   +  +  G+ 
Sbjct: 329 DNVAFHGVMFPCSQVGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFG-DAAQRTGIP 387

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G+IP   
Sbjct: 388 ADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANFFGGVIPN-M 446

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             TE+D +IL    +   +         +  A+  ++++    ++Y  +Q PW L K + 
Sbjct: 447 DLTEADATILEEIHQECLQWDTQFDGVRLKDAVKSILNVSRIGNQYMQSQTPWVLMKGDD 506

Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               RA T++ V   +   LA++L   +P ++  I
Sbjct: 507 AAKKRAGTIIGVAANIAYHLAVILYPVMPSVSETI 541


>gi|242006743|ref|XP_002424206.1| methionine-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212507555|gb|EEB11468.1| methionine-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 891

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 211/477 (44%), Gaps = 50/477 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    +++ DV ARF RL G + L+ +GTDE+G      A   
Sbjct: 250 ILITSALPYVNNVPHLGNIIGCVLSGDVFARFCRLRGYNTLYISGTDEYGTATETKALEE 309

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+  +    +     IS+D F RTT  +  + C++++KKI++   I      
Sbjct: 310 GLTPREICDKYYKIHDAIYKWFGISFDYFGRTTTPQQTEICQLIFKKINENNYIISDVVE 369

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHNPVQW 159
                + + Y  D  V        Y+ A G   +                   +  PV  
Sbjct: 370 QLLCEKCDRYLADRFVEGVCPRCSYEDARGDQCDGCGHLINAPELIKPRCKMCKQTPV-- 427

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           + +   FF      + LL  +            R    +++  GLK   ++R    WGI 
Sbjct: 428 LRQSKQFFLDLPKIEPLLKEWIQQRWLDWSHNAREISKAWLNDGLKPRCITRD-LKWGIP 486

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-------IGKDILR 269
           +P +     + YVW DA   Y++ T GY         K+W  D +        + KD + 
Sbjct: 487 VPLEGFESKVFYVWFDAPIGYISITKGYT----SEWKKWWMPDKNTKVNLYQFMAKDNVP 542

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325
           FH++ +PA L+++  N      +F+  ++ ++  K SKS G  +   +  +E G+  D  
Sbjct: 543 FHSVMFPASLIASKENYVTVSNIFATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPADVW 601

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +    L  + N++L + +GN ++R++    K +D  IP     T+
Sbjct: 602 RFYLLYVRPESQDSSFSWSDLALKNNSELLSVLGNFINRALMFCEKTFDSKIPNMN-LTD 660

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +  ++++ +R L E    ++   +   +  ++S+    +++  + +PW L K + D
Sbjct: 661 ENYELVALVNRELHEYISVIEKGKLREGIRHLLSIARLGNQFMQSSQPWVLCKGSED 717


>gi|320325842|gb|EFW81903.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327240|gb|EFW83254.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 547

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 213/490 (43%), Gaps = 46/490 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
           A  ++ AD+ ARF R  G DV+F  GTDEHG     AAQNA +  K + +      R + 
Sbjct: 2   AGSLLPADIYARFLRQQGHDVMFICGTDEHGTPAEIAAQNANMDVKSYCNHMYEVQRRIY 61

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141
               +S++ F R++  ++ +  +  + K+ D G I++   S +YS  +  +  D  +   
Sbjct: 62  ANFGLSFNFFGRSSCDQNVEITQEFFFKLQDAGYIFEDVISQYYSAVEGRFLPDRFINGQ 121

Query: 142 -----YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
                +  A G   +   A  NP + +  +         + +  S+     E  +P+ ++
Sbjct: 122 CPRCGFLSATGDQCDGCGALLNPEELINPKSSISGDEKLELRRTSHLFLDLEKTVPLLQK 181

Query: 194 -----------NEVIS--FVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTN 237
                        +IS      GLK   ++R    WGI +P     P+ + YVW DA   
Sbjct: 182 WHDSNRWGNLTRGIISKWMDNEGLKARCITRDN-KWGIPVPLLHLTPK-VFYVWFDAPYA 239

Query: 238 YLTTT-GYLDNPDGSKA---KFWPAD----LHVIGKDILRFHAIYWPAFLLSA--NLPLP 287
           Y+  T  Y D    ++    K+W +D       + KD + FHAI+WPA LL++  N+ L 
Sbjct: 240 YIAITKAYGDTLGDAETILKKWWYSDSVEYTQFMAKDNVPFHAIFWPAQLLASRDNVKLV 299

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +    ++ + G K S S    +   + +E    D  RY+L        D  +      
Sbjct: 300 DDIKGFNWLTYDGGKFSTSRLRGVFLDQALELFPADYWRYYLAARAPESSDSDFSFQDFA 359

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRE 403
           + VN++L  G+GN V R   +   +Y+    T  +F       DE+++   + +   ++ 
Sbjct: 360 QVVNSELVGGLGNFVRRVFKLASNNYE---ETNVSFNTREVMLDEALVVEITELFSNLQS 416

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            M  + + +++ ++  L S  +RY    +PW   K++P +A  V+      I   ++ + 
Sbjct: 417 LMYKKEVRKSIEKIRLLWSIANRYIAEAQPWTTIKSDPHQALQVIKNCFYFIYLFSLSVA 476

Query: 464 AFVPKLANKI 473
             +P  A K+
Sbjct: 477 PVIPFTAEKL 486


>gi|119496181|ref|XP_001264864.1| methionyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413026|gb|EAW22967.1| methionyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 651

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 231/519 (44%), Gaps = 53/519 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQQHTEISQAIFKRLYDNGYLT 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163
           +      +     ++  D  V        Y+ A G Q     H         P   ++  
Sbjct: 131 EKTAEQPFCEAHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E ++LP           R+   +++K GLKD  ++R   
Sbjct: 191 TPVRRSTKHIHLLLDKLQPEIEKWVLPAMEKGNWPKNSRDITKAWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266
            WG+ +P  P +   ++YVW +A   Y + T    N      K+W  P ++ +   +GKD
Sbjct: 250 KWGVPVPL-PGFENKVLYVWFEACIGYPSITA---NYTADWEKWWRNPEEVELYQFLGKD 305

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH++ +P   L       +   + +  ++ ++G K SKS G  V         V  D
Sbjct: 306 NVPFHSVIFPGCELGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGNNARQTGVPPD 365

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TP 380
             RY+L++      D  ++     +  N++L   +GNLV+R V +I   Y+  IP    P
Sbjct: 366 VWRYYLLKNRPETGDTQFEWRPFVECNNSELLAKLGNLVNRVVKLIAASYNSTIPEFIVP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKK 438
            +F  + + I S+  + ++E+        ++ A  LA+  + + + +R  +A     L  
Sbjct: 426 ESFQPNLDEITSLLRQYIEEMEGVHLRAGVNTAMRLAEAGNGLIQANRLDNA-----LIA 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             PDRA+ V+   + +I  L+ +   ++P  +  I + L
Sbjct: 481 NEPDRAAAVVGTVINLIHLLSSVFAPYLPATSRSILEQL 519


>gi|70994984|ref|XP_752268.1| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849903|gb|EAL90230.1| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159131024|gb|EDP56137.1| methionyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 651

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 230/519 (44%), Gaps = 53/519 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQQHTEISQAIFKRLYDNGYLT 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163
           +      +     ++  D  V        Y+ A G Q     H         P   ++  
Sbjct: 131 EKTAEQPFCEAHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E ++LP           R+   +++K GLKD  ++R   
Sbjct: 191 TPVRRSTKHIHLLLDKLQPEIENWVLPAMEKGNWPKNSRDITKAWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266
            WG+ +P  P +   ++YVW +A   Y + T    N      K+W  P ++ +   +GKD
Sbjct: 250 KWGVPVPL-PGFENKVLYVWFEACIGYPSITA---NYTADWEKWWRNPEEVELYQFLGKD 305

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH++ +P   L       +   + +  ++ ++G K SKS G  V         V  D
Sbjct: 306 NVPFHSVIFPGCELGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGNNARQTGVPPD 365

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TP 380
             RY+L++      D  ++     +  N++L   +GNLV+R V +I   Y+  IP    P
Sbjct: 366 VWRYYLLKNRPETGDTQFEWRSFVECNNSELLAKLGNLVNRVVKLIAASYNSTIPEFTVP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKK 438
            +F  + + I S+  + ++E+        I+ A  LA+  +   + +R  +A     L  
Sbjct: 426 ESFQPNLDEITSLLRQYIEEMEGVHLRPGINTAMRLAEAGNGFIQANRLDNA-----LIA 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             PDRA+ V+   + +I  L+ +   ++P  +  I + L
Sbjct: 481 NEPDRAAAVVGTVINLIHLLSSVFAPYLPATSKSILEQL 519


>gi|21428760|gb|AAM50099.1| AT05114p [Drosophila melanogaster]
          Length = 1012

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 231/528 (43%), Gaps = 77/528 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQ-------------------NSRNFRDMADVLDISYDDFIRT----TEKRH 102
            +T +   D+                        ++  D++  ++ D ++     TE   
Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375

Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156
              C    R L  +  +    + GC  G+   R       D+  K   G+  NA     P
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425

Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206
              +       R S   D+L +   ++ P+    +++         +VI+  ++K GLK 
Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKP 482

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259
             ++R    WGI +P +   + + YVW DA   Y++ T           ++W PA     
Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +
Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +E G+  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K++
Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657

Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
              +  PG  T  DE + L++ +R L+    +M+   +   +  ++++    + Y  +Q+
Sbjct: 658 SSTV--PGVITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L K   D   RAST++ + V +   LA LL  ++P  A  +F  L
Sbjct: 716 PWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763


>gi|213022927|ref|ZP_03337374.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 298

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 12/226 (5%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +I
Sbjct: 68  DSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEI 124

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD-----LHVIGKDILRFHA 272
           P+ P    YVW+DA   Y+ +   L +  G    F   W  D      H IGKDI+ FH+
Sbjct: 125 PNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFHS 184

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   +
Sbjct: 185 LFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTAK 244

Query: 333 IACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           ++   D    + +   +RVNAD+ N + NL SR+   I K +DG++
Sbjct: 245 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL 290


>gi|24655311|ref|NP_611382.1| CG15100 [Drosophila melanogaster]
 gi|21627004|gb|AAF57625.2| CG15100 [Drosophila melanogaster]
          Length = 1022

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 231/528 (43%), Gaps = 77/528 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQ-------------------NSRNFRDMADVLDISYDDFIRT----TEKRH 102
            +T +   D+                        ++  D++  ++ D ++     TE   
Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375

Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156
              C    R L  +  +    + GC  G+   R       D+  K   G+  NA     P
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425

Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206
              +       R S   D+L +   ++ P+    +++         +VI+  ++K GLK 
Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKP 482

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259
             ++R    WGI +P +   + + YVW DA   Y++ T           ++W PA     
Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +
Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +E G+  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K++
Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657

Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
              +  PG  T  DE + L++ +R L+    +M+   +   +  ++++    + Y  +Q+
Sbjct: 658 SSTV--PGVITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L K   D   RAST++ + V +   LA LL  ++P  A  +F  L
Sbjct: 716 PWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763


>gi|320163393|gb|EFW40292.1| methionyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1036

 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 234/531 (44%), Gaps = 60/531 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G      
Sbjct: 304 DQRNILITSALPYVNNVPHLGNIIGCVLSADVYARFCRERGYNTLYICGTDEYGTATETK 363

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIY 120
           A   G+T +   D+  +  R++ +   IS+D F R TT ++   +  I  + + +   + 
Sbjct: 364 ALEEGLTPQQICDKYHKLHREIYEYFQISFDHFGRTTTPQQTEISQDIFLRALKNDTLLE 423

Query: 121 KG-----CYSGWYSLRD--------EAYYND---DEVYKGADGQYYNA-----------Q 153
           +      C +    L D           Y+D   D+  K   G+  NA           +
Sbjct: 424 ESVEQLLCETCNRYLADRFVEGICPSCKYDDARGDQCDKC--GKLLNAVELVEPRCKLCR 481

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             PV        F  L     ++  +Y  S  +       ++   S++K G+K   ++R 
Sbjct: 482 SRPVV-RPSRHMFLNLPMLDGQIKEWYAGSSVKGDWTASAKHITSSWLKEGVKPRCITRD 540

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265
              WG+ +P D   + + YVW DA   Y++ T           K+W  P+ + +   + K
Sbjct: 541 -LKWGVPVPLDGFREKVFYVWFDAPIGYISITAAYT---AEWEKWWKNPSQVQLYQFMAK 596

Query: 266 DILRFHAIYWPAFL------LSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEV 316
           D + FH+I +PA +      L+A  N  L   + +  F+ ++  K SKS G  V      
Sbjct: 597 DNVPFHSIIFPASIIFPASQLAAKDNYTLVHHISAVEFLNYEDGKFSKSRGVGVFGNHAR 656

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              + +D  R++L+       D  +    L  +VN +L   +GNLV RS+S I  ++ G 
Sbjct: 657 DTGLAIDIFRFYLLGIRPEYTDSVFSWTDLASKVNNELLANLGNLVQRSLSFIKANFAGK 716

Query: 377 IPTPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +P      ++D    + +++ +R L+E  + ++   +  AL  V+ + S  ++YF   +P
Sbjct: 717 VPKVVLNVDTDAQSCNFVALVNRYLREYIDLLEQVHLRDALRLVLKISSIANQYFQTVQP 776

Query: 434 WELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           W+  K   D    R +T L +    +  L+ LL  F+P    KI + L  A
Sbjct: 777 WKTIKLTDDLSKQRTATCLGLCANFVHLLSTLLFPFMPVTGKKILEQLNAA 827


>gi|145239045|ref|XP_001392169.1| methionyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134076672|emb|CAK45203.1| unnamed protein product [Aspergillus niger]
          Length = 659

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/520 (23%), Positives = 225/520 (43%), Gaps = 51/520 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + +++A+ Y N  PH+G+    ++ ADV ARFH+  G   L+  GTDE+G     
Sbjct: 11  KGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARFHKACGHQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  + + +  +I +D F RT  ++H +  + ++KK+ + G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQQVYEWFEIGFDHFGRTPTQQHTEISQAIFKKLYENGYLT 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163
           +      +     ++  D  V        Y  A G Q     H        NP   ++  
Sbjct: 131 EKTAEQPFCETHGSFLADRYVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKLDGA 190

Query: 164 GYFFRLSAY----QDKLLSYYESHPEFIL-----PIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +     DKL    E   +  +     P   R    S++K GLKD  ++R   
Sbjct: 191 TPVRRSTKHIHLLLDKLQPQIEEWSKNAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGKD 266
            WG+ +P +     ++YVW +A   Y + T        S  + W   P D+ +   +GKD
Sbjct: 250 KWGVPVPLEGFETKVLYVWFEACIGYPSITANYT----SDWELWWRNPEDVQLYQFLGKD 305

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322
            + FH++ +P   L       +   + +  ++ ++G K SKS G  +      +E GV  
Sbjct: 306 NVPFHSVIFPGSQLGTKEKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGTSA-KETGVPP 364

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RY+L++      D  ++     +  N++L   +GNLV+R + ++   Y  ++P    
Sbjct: 365 DVWRYYLLKNRPETGDTQFEWRSFVESNNSELLAKLGNLVNRVIKLVTASYGSVVP---E 421

Query: 383 FT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
           FT  ES +  L   +  L++  E M+   +   +   + L    +    A +    L   
Sbjct: 422 FTVPESFQPTLDEVTATLRQYIEEMEGAHLRAGVVSAMKLAEAGNGLIQANRLDNSLIAN 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            P+RA+ V+   + +I  LA +   ++P  +  I + L V
Sbjct: 482 EPERAAAVVGTVLNLIHLLASVFSPYLPATSKSINEQLDV 521


>gi|171686138|ref|XP_001908010.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943030|emb|CAP68683.1| unnamed protein product [Podospora anserina S mat+]
          Length = 684

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 233/577 (40%), Gaps = 86/577 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +E + I++A+ Y N  PH+G+    ++ ADV ARF R  GL  ++  G+DE+G      A
Sbjct: 14  KENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTIYICGSDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + GV       +     +++ D   I +D F RT    H +  + ++K + + G I + 
Sbjct: 74  LSEGVDPATLCAKYHAIHKEIYDWFRIDFDTFGRTPTDEHTEIVQSVFKHLWNNGYIEQR 133

Query: 123 CYSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             +  Y    E++  D  V         KGA G   +A  N +  ME +      S  Q+
Sbjct: 134 ETTQAYCPEHESFLADRYVEGECSLCHDKGARGDQCDACGNLLDPMEPD---LDASGNQE 190

Query: 175 KLLSYYESHPEFIL----PIER------------RNEVISFVKSGLKDLSLS-------- 210
              + +  +P+  L    PI+R            + E+ +++ S  KD S +        
Sbjct: 191 TKATGWLINPKCKLDGTTPIKRQTKHLYLRLDALQGEIETWIASAKKDWSANCTSITYSW 250

Query: 211 ----------RKTFDWGIKIP---------DDPQYIMYVWIDALTNYLTTTGYL---DNP 248
                      +   WG+ IP         D  + + YVW DA   Y + T       NP
Sbjct: 251 LDQGLKPRGITRDLKWGVPIPTGLDGLSEEDFAKKVFYVWFDACIGYPSITKTFTDAGNP 310

Query: 249 DGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKG 300
            G+  + W   P ++ +   +GKD + FH I WPA  + +  N    K + +  ++ ++G
Sbjct: 311 SGTNWEKWWKNPEEVSLYQFMGKDNVPFHTIIWPASQIGSKENWTKVKTLSTTEYLNYEG 370

Query: 301 EKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            K SKS G  V         +  D  R++L+       D  +  +      N DL   +G
Sbjct: 371 GKFSKSKGVGVFGNNARDTGIDPDIWRFYLLSRRPETSDSEFKWEEFVDVNNNDLLKNLG 430

Query: 360 NLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           NL  R +         ++P       P      DE      +++L E    ++   +   
Sbjct: 431 NLCQRVIKFTQAKMGSVVPDFDLSKFPALQQHKDE-----VNKLLHEYNTTLRGLKLRHG 485

Query: 414 LAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L+ ++++    ++   D +   +L    P+R + V+ + +  I  LA +L  ++P  +  
Sbjct: 486 LSVIMAISGLGNKLLQDNKLGNQLIAEEPERCNAVIGIALNHIHLLANVLAPYMPGKSQA 545

Query: 473 IFDILFVADENRCFQSLD----QRLKPGFMLHKTFDP 505
           I   L    E +    LD      +KPG   HK  +P
Sbjct: 546 ILKQLGFDGEGQTASILDVWEADAIKPG---HKLGEP 579


>gi|296828372|ref|XP_002851320.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238838874|gb|EEQ28536.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 650

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 223/515 (43%), Gaps = 47/515 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+++  G   L+  GTDE+G      A
Sbjct: 13  QRNILITSALPYVNNVPHLGNIVGSVLSADVFARYNKACGRPTLYVCGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +   ++ +R  +++    +I +D F RT  K H +  + ++K++ + G + + 
Sbjct: 73  LEEGVTPEELCEKYNRIHQEVYKWFNIGFDIFGRTPTKPHTEISQGIFKRLYENGYLEEK 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156
                +  + +++  D  V        Y  A G Q    QH                  P
Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+  +    F  L   Q ++ S+  S  E    P   R    S++K GL+   ++R    
Sbjct: 193 VR-RQTRHIFLLLDKLQPQIDSWASSAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           WG+ +P D   + ++YVW +A   Y + T    N      K+W  P D+ +   +GKD +
Sbjct: 251 WGVPVPLDGYEKKVLYVWFEACIGYPSITA---NYTPEWEKWWRNPEDVQLYQFLGKDNV 307

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FHA+ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  
Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L++      D  ++        N +L   +GNLV+R + ++   K Y+ +IP     
Sbjct: 368 RYYLLKNRPESGDTQFEWKSFIDSNNGELLAKLGNLVNRVIKLVASPKAYNSVIPE-FTV 426

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
           TE     L   + +L++    M+   +   +   + +    +    A K    L    P+
Sbjct: 427 TEPFYPALEEVTSLLRQYINEMEGVHLRAGILTAMKIAEAGNGLIQANKLDNSLIANEPE 486

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           RA+TV+ + V +I   + +   ++P     I + L
Sbjct: 487 RAATVVGIVVNLIHLCSSIFCPYLPATCVSILEQL 521


>gi|303320629|ref|XP_003070314.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110000|gb|EER28169.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 657

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 229/521 (43%), Gaps = 53/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
            K +  + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G    
Sbjct: 10  QKGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++   G +
Sbjct: 70  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162
            +      +  + +++  D  V       +Y+                    NP   ++ 
Sbjct: 130 EEKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDG 189

Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213
                R + +   LL   +   E ++ P IE+      + VI  S++K GLKD  ++R  
Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264
             WG+ +P +     ++YVW +A   Y + T  Y D+      + W   P D+ +   +G
Sbjct: 249 LKWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDD-----WELWWRNPEDVRLYQFLG 303

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FHA+ +P   L    N  +   + +  ++ ++  K SKS G  V         + 
Sbjct: 304 KDNVPFHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P 
Sbjct: 364 PDVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPD 423

Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436
              FT  ES   IL   + +L++  E M+   +   L   + +    +    + K    L
Sbjct: 424 ---FTIPESFNPILDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSL 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               P+RA+TV+ +   +I   A +   ++P  +  I + L
Sbjct: 481 IANEPERAATVVGIVTNLIHLCASVFSPYLPATSKSILEQL 521


>gi|328865789|gb|EGG14175.1| methionyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 733

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 224/519 (43%), Gaps = 61/519 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    +++ DV +R+ RL G + ++  GTDE+G      A
Sbjct: 23  QRNILITSALPYVNNVPHLGNIIGCVLSGDVYSRYCRLKGHNCIYICGTDEYGTATETKA 82

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+     +++ +  +I +D F RT+ +   +  + ++ K+   G  +  
Sbjct: 83  LQEKCTPKEICDRYHAIHKEIYEWFNIGFDKFGRTSTQSQTEITQDIFMKLHQNGLTFSD 142

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWME---------- 161
                +  + + +  D  V        Y+ A G   +      NP   ++          
Sbjct: 143 TVEQLFCEQCKIFLADRYVEGICPHCQYEDARGDQCDKCTKLLNPTDLIQPRCKVCSTTP 202

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                +  F  L   Q++L ++ +           +N   S+VK  LK   ++R    WG
Sbjct: 203 IIKSTKHIFLDLPKVQERLDTFVQGS-SGKWSENSQNITNSWVKGELKPRCITRD-LKWG 260

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GKDILRF 270
             +P +   + + YVW DA   YL+ T           K+W  P ++ ++   GKD + F
Sbjct: 261 TPVPLEEFKEKVFYVWFDAPIGYLSITKEYTK---EWEKWWKNPENVELVQFMGKDNVPF 317

Query: 271 HAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRY 327
           H + +P+ L+    P  +   + +  ++ ++  K SKS    V        ++  D  R+
Sbjct: 318 HTVIFPSSLIGTEDPYTMLHNLSTTEYLNYETGKFSKSRNTGVFGDGARDTKIPADIWRF 377

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L+       D  +  D    +   +L N  GNLV+R +  +  ++DG IP      +SD
Sbjct: 378 YLLSNRPEVSDSVFSWDDFSAKT-LELLNNFGNLVNRVLKFVSVNFDGKIPKID-LNDSD 435

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQV-----ISLVSEVDR----YFDAQKPWELKK 438
           +       + +QE+ +N++  L H AL  V     + L   + R    Y    KPWE+ K
Sbjct: 436 K-------KFVQEVNDNVK--LYHEALEAVRIKEGLRLAMAISRLGNQYQQENKPWEVIK 486

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+  R    + + V  I+ LA L + ++P ++ +I + L
Sbjct: 487 TDKARCGASVALLVNTIKLLATLFEPYLPLISQQIHEQL 525


>gi|255711786|ref|XP_002552176.1| KLTH0B08976p [Lachancea thermotolerans]
 gi|238933554|emb|CAR21738.1| KLTH0B08976p [Lachancea thermotolerans]
          Length = 751

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 222/514 (43%), Gaps = 51/514 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 198 ILITSALPYVNNVPHLGNIVGSVLSADIYARYCKARNYNTLFVCGTDEYGTATETKAIEE 257

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T +   D+  +   D+     I +D F RTT ++  +  + ++ K+++ G + +    
Sbjct: 258 GCTPRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEKQTEIAQDIFNKLNNNGYLEEHSMK 317

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---------NPVQWME------- 161
             Y    +AY  D  V        Y+ A G   +            NP   ++       
Sbjct: 318 QLYCEEHKAYLADRYVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDNSKPIPR 377

Query: 162 -EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   + ++  + E S  E       R    S++K GL+   ++R    WG  
Sbjct: 378 NSDHIFISLDKLEPRIKEWVEKSSREGGWSKNSRTITQSWLKEGLQPRCITRDLV-WGTP 436

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHA 272
           +P +     ++YVW DA   Y++ T   +  DG K K+W  P ++ +   +GKD + FH+
Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITA--NYTDGWK-KWWKDPENVQLYQFMGKDNVPFHS 493

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P   L  N    +   + +  ++ ++G K SKS G  V         V     RY+L
Sbjct: 494 VIFPGSQLGTNENWTMLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAKDTGVSPSVWRYYL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFT 384
                   D  +       R N++L   +GN V+R V  +   Y+G++P         F 
Sbjct: 554 ASVRPESSDSHFSWSDFVARNNSELLANLGNFVNRLVKFVNAKYNGVVPEYDQKQLADFV 613

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           + ++ I S+ S  + E+ ++ +     R L   +SL +  + +    K    L    P +
Sbjct: 614 KLEKDINSILSSYVSEMEQSHE----RRGLEIAMSLSARGNLFLQENKLDNSLFSEFPAK 669

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+ V + ++  +A ++  F+P+ A  I+ +L
Sbjct: 670 SDAVVGVGLNIVYSVASVIYPFMPEAAETIYKML 703


>gi|119184836|ref|XP_001243278.1| hypothetical protein CIMG_07174 [Coccidioides immitis RS]
          Length = 657

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 229/521 (43%), Gaps = 53/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
            K +  + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G    
Sbjct: 10  QKGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++   G +
Sbjct: 70  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162
            +      +  + +++  D  V       +Y+                    NP   ++ 
Sbjct: 130 EEKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDG 189

Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213
                R + +   LL   +   E ++ P IE+      + VI  S++K GLKD  ++R  
Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264
             WG+ +P +     ++YVW +A   Y + T  Y D+      + W   P D+ +   +G
Sbjct: 249 LKWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDD-----WELWWRNPEDVRLYQFLG 303

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FHA+ +P   L    N  +   + +  ++ ++  K SKS G  V         + 
Sbjct: 304 KDNVPFHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P 
Sbjct: 364 PDVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPD 423

Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436
              FT  ES   +L   + +L++  E M+   +   L   + +    +    + K    L
Sbjct: 424 ---FTIPESFNPVLDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSL 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               P+RA+TV+ +   +I   A +   ++P  +  I + L
Sbjct: 481 IANEPERAATVVGIVTNLIHLCASVFSPYLPATSKSILEQL 521


>gi|312374412|gb|EFR21973.1| hypothetical protein AND_15967 [Anopheles darlingi]
          Length = 1133

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 216/520 (41%), Gaps = 69/520 (13%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ AD+ AR+ RL G + L+  GTDE+G      A    +
Sbjct: 419 ITSALPYVNNVPHLGNIVGCVLSADIFARYSRLCGYNTLYIGGTDEYGTATETKALAENM 478

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+       +     I +D F RTT        + L+ ++  KG I        
Sbjct: 479 TPRQICDKYFDIHNSIYRWFGIGFDYFGRTTTTEQTRIVQELFGELYAKGYIETRAVEQL 538

Query: 128 YSLRDEAYYNDDEV----------YKGADG-------QYYNAQH---------NPVQWME 161
              + + Y  D  V          Y+ A G       +  NA           N    M 
Sbjct: 539 LCTKCDRYLADRFVEGTCPHPGCGYEDARGDQCDGCGKLVNAIELLRPRCKVCNSSPIMR 598

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------EVI--SFVKSGLKDLSLSRK 212
           E   FF         L   +  PE    I+R +        VI  S++K GLK   ++R 
Sbjct: 599 ESNQFF---------LDLPKIEPELRAWIDRSDPGWTHNARVITRSWLKEGLKSRCITRD 649

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLD------NPDGSKAKFWPADLHVI 263
              WGI +P +   + + YVW DA   Y++ T+ Y         PD +           +
Sbjct: 650 -LKWGIPVPVEGYEKKVFYVWFDAPIGYISITSRYCKEWKQWWQPDTANTGVKVDLYQFM 708

Query: 264 GKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320
            KD + FH++ +PA LL+ N    L   + +  ++ ++  K SKS G  V         +
Sbjct: 709 AKDNVPFHSVMFPASLLAVNQGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQDTGI 768

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L      G+D  +    L+ R N +L   +GN V+R++    K +D  IP P
Sbjct: 769 PADVWRFYLGASRPEGQDSSFSWSDLQARNNNELLKNLGNFVNRALVFCEKFFDSTIP-P 827

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKT 439
               E D ++L++ +R L+     M+   +   +  ++ +    +++   ++PW ++K T
Sbjct: 828 MTLIEDDYTLLALANRELKGYVHQMEKARMRDGIRHMLQISRYGNQFMQNEEPWVKVKGT 887

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +A   L         LA L+  F+P  A  ++  L V
Sbjct: 888 DEQKARAGL---------LATLIFPFMPATARNLYSQLNV 918


>gi|195384499|ref|XP_002050955.1| GJ22433 [Drosophila virilis]
 gi|194145752|gb|EDW62148.1| GJ22433 [Drosophila virilis]
          Length = 1016

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 223/517 (43%), Gaps = 55/517 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A   
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+       +     I +D F RTT +   D  +  +  +   G I      
Sbjct: 316 NMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFHDVYKAGYILTESVE 375

Query: 126 GWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------EEGYF 166
                + + +  D  V          Y+ A G   +     V   E              
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNSAPV 435

Query: 167 FRLSAYQDKL-LSYYESHPEFILPIERRNE-------VIS--FVKSGLKDLSLSRKTFDW 216
            R S   D+L L   ++ P+    ++R  +       VI+  +++ GLK   ++R    W
Sbjct: 436 LRSS---DQLFLDLPKAEPQLREWVDRVEQGWTHNARVITRAWLREGLKPRCITRD-LKW 491

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIGKDI 267
           GI +P     + + YVW DA   Y++ T           ++W PA          + KD 
Sbjct: 492 GIPVPHKNFEKKVFYVWFDAPFGYVSMTKRYTK---EYLQWWQPAAGTNVELFQFMAKDN 548

Query: 268 LRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--D 323
           + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  +E G+  D
Sbjct: 549 VPFHSVVWPSVLLAINKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDA-QETGIPAD 607

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L      G+D  +  + L  R N++L N +GN V+R++    K+++  +P     
Sbjct: 608 VWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVPQI-VL 666

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD- 442
            + +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K N + 
Sbjct: 667 NQDELVLLALINRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNDEQ 726

Query: 443 --RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             RA+T++ +   +   LA LL  ++P  A  +F  L
Sbjct: 727 KSRAATIIGLCANIACLLANLLFPYMPSTARNLFAQL 763


>gi|320041417|gb|EFW23350.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 657

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 229/521 (43%), Gaps = 53/521 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
            K +  + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G    
Sbjct: 10  QKGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++   G +
Sbjct: 70  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEE 162
            +      +  + +++  D  V       +Y+                    NP   ++ 
Sbjct: 130 EEKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDG 189

Query: 163 EGYFFRLSAYQDKLLSYYESHPE-FILP-IER-----RNEVI--SFVKSGLKDLSLSRKT 213
                R + +   LL   +   E ++ P IE+      + VI  S++K GLKD  ++R  
Sbjct: 190 ATPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 248

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHV---IG 264
             WG+ +P +     ++YVW +A   Y + T  Y D+      + W   P D+ +   +G
Sbjct: 249 LKWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDD-----WELWWRNPEDVRLYQFLG 303

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FHA+ +P   L    N  +   + +  ++ ++  K SKS G  V         + 
Sbjct: 304 KDNVPFHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P 
Sbjct: 364 PDVWRYYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPD 423

Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWEL 436
              FT  ES   +L   + +L++  E M+   +   L   + +    +    + K    L
Sbjct: 424 ---FTIPESFNPVLDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSL 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               P+RA+TV+ +   +I   A +   ++P  +  I + L
Sbjct: 481 IANEPERAATVVGIVTNLIHLCASVFSPYLPATSKSILEQL 521


>gi|156096647|ref|XP_001614357.1| tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803231|gb|EDL44630.1| tRNA ligase, putative [Plasmodium vivax]
          Length = 535

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 109/196 (55%), Gaps = 9/196 (4%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           DEHG KI + ++   ++    V+  S  ++ M   L +  + F RTT + H    + +WK
Sbjct: 2   DEHGLKIERKSKKLEISIAEHVNNMSSYYQMMNQKLHVHVNIFYRTTSQFHKSFVQQVWK 61

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEE-GYFFRL 169
            +++ G IYKG Y G+Y + +E Y N+ E+ +         +++P V ++EEE  YFF +
Sbjct: 62  YLAENGYIYKGTYRGYYDVNEEKYLNEFELKQ-------KRKNDPSVLYIEEENSYFFNI 114

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
             +++ L   Y+   E I P   + E++ FV   LKD+ +SR    WGIKIP + +  +Y
Sbjct: 115 LKFKNFLTDLYQRSEEVIYPSYLQKEMLHFVNHELKDVCISRYNTQWGIKIPGEEKGTIY 174

Query: 230 VWIDALTNYLTTTGYL 245
           VW DAL +Y+++  ++
Sbjct: 175 VWFDALLSYVSSVLHM 190



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 8/224 (3%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           K W  ++ +IGKDIL+FH + +   L S +L LPKK+  HG I  +  K+SK++GNVI P
Sbjct: 283 KAWNPEVQIIGKDILKFHGVLYICLLQSLHLKLPKKILCHGLIKSENVKMSKTIGNVISP 342

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMIL 370
            +++++   D +R +      C  + F DK+  K  + +    + N +GNL+ R VS+ +
Sbjct: 343 FDIVQKYDTDIVRLYF---FGCA-NIFEDKNFKKTHLESFQLFVRNNVGNLIYRVVSLCV 398

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                 I   G     +  IL  CS   Q++   + N+     L  +++L+ +V+++F  
Sbjct: 399 DSNYLNIFQIGETDFLESPILRQCSESKQKLVALIHNREFPLFLENLMTLIKQVNKFFVH 458

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++PW+    +  R + ++Y T+E I+ +++ L   +P + + I 
Sbjct: 459 REPWKCTD-DSVRFNRIIYETLEGIKFVSVFLYPIMPHICSSIL 501


>gi|241956011|ref|XP_002420726.1| methionyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223644068|emb|CAX41811.1| methionyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 748

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 226/517 (43%), Gaps = 44/517 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G      
Sbjct: 185 DERNILITSALPYVNNVPHLGNIVGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATETK 244

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+ +KG + +
Sbjct: 245 ALEENVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFMKLHNKGYLEE 304

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160
                 Y    +++  D  V        Y+ A G   +   N   P++ +          
Sbjct: 305 KTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGNT 364

Query: 161 ----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               E    + +L+  ++ L  +  +S  +       +N   S++K GL+   ++R    
Sbjct: 365 PVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSKNSKNITDSWIKRGLEPRCITRDLI- 423

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW--PADL---HVIGKD 266
           WG  +P     + ++YVW DA   Y++ T   + D+      K+W  P ++     +GKD
Sbjct: 424 WGTPVPLKGYDKKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWRNPENVDLYQFMGKD 483

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323
            + FH + +PA  +       K   + +  ++ ++  K SKS G  +      +E GV  
Sbjct: 484 NVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542

Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N++L   +GN V+R V  ++  Y+G+IP    
Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602

Query: 383 FTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440
               D        + +L    +NM+N  + + L   +++ S  +++  D +    L    
Sbjct: 603 KNIPDYGKFETDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P ++  V+ V + ++  ++ ++  F+P+   KI  IL
Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTAKIDQIL 699


>gi|327301905|ref|XP_003235645.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326462997|gb|EGD88450.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 650

 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 224/517 (43%), Gaps = 51/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G      A
Sbjct: 13  KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + + 
Sbjct: 73  LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156
                +  + +++  D  V        Y  A G Q    QH                  P
Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           ++  + +  F  L   Q  + S+  +  E    P   R    S++K GL+   ++R   +
Sbjct: 193 IR-RKTKHIFLLLDKLQPDIESWAATASEKGDWPKNSRVITGSWLKEGLQPRGITRD-LN 250

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           WG+ +P D   + ++YVW +A   Y + T    N      K+W  P ++ +   +GKD +
Sbjct: 251 WGVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRSPEEVQLYQFLGKDNV 307

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FHA+ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  
Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L++      D  ++        N +L   +GNLV+R V ++   K Y  +IP    F
Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIPE---F 424

Query: 384 TESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
           T S+     L   S +L++    M+   +   +   + +    +    A K    L    
Sbjct: 425 TVSEAFYPALEEVSSLLRQYINEMEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANE 484

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P+RA+ V+ + V +I   + +   ++P  +  I D L
Sbjct: 485 PERAAAVVGIVVNLIHLCSSVFCPYLPATSASILDQL 521


>gi|158297351|ref|XP_317601.4| AGAP007891-PA [Anopheles gambiae str. PEST]
 gi|157015154|gb|EAA12906.4| AGAP007891-PA [Anopheles gambiae str. PEST]
          Length = 977

 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 210/513 (40%), Gaps = 44/513 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ AD+ AR+ RL G + L+  GTDE+G      A    +
Sbjct: 263 ITSALPYVNNVPHLGNIVGCVLSADIFARYSRLCGYNTLYIGGTDEYGTATETKALAENM 322

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+       +     I +D F RTT        + ++K++   G I        
Sbjct: 323 TPRQICDKYFDIHNSIYRWFGIGFDYFGRTTTAEQTRIVQDIFKELYASGYIETRSVEQL 382

Query: 128 YSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWME---------------- 161
              + + Y  D  V          Y+ A G   +     V  +E                
Sbjct: 383 LCQKCDRYLADRFVEGTCPHPGCGYEDARGDQCDGCGKLVNAVELLRPRCKMCNTSPVIR 442

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E   FF      +  L  +    E       R    +++K GLK   ++R    WGI +P
Sbjct: 443 ESSQFFLDLPKIEPTLREWVDRSEGGWTHNARVITRAWLKEGLKSRCITRD-LKWGIPVP 501

Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLD------NPDGSKAKFWPADLHVIGKDILRFHA 272
            +   + + YVW DA   Y++ T+ Y         PD +           + KD + FH+
Sbjct: 502 LEGYEKKVFYVWFDAPIGYISITSRYCKEWKQWWQPDTANTGVKVDLYQFMAKDNVPFHS 561

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +PA LL+ +    L   V +  ++ ++  K SKS G  V         +  D  R++L
Sbjct: 562 VMFPASLLAVDKGYTLVSHVMATEYLNYEDGKFSKSRGIGVFGNDAQDTGIPADVWRFYL 621

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                 G+D  +    L+ R N++L   +GN  +R++    K +D  IP P    E D +
Sbjct: 622 GAARPEGQDSSFSWSDLQARNNSELLKNLGNFFNRALVFCEKFFDSTIP-PMTLLEEDYT 680

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAST 446
           +L++ +R L+     M+   +   +  ++ +    ++   +++PW   K   D   RA T
Sbjct: 681 LLALINRELKGYVNQMEKARMRDGIRHLLQISRYGNQLMQSEEPWVKVKGTDDQKARAGT 740

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V+ +       LA L+  F+P  A  ++  L V
Sbjct: 741 VIGLCCNFACLLATLIFPFMPTTARNMYSQLNV 773


>gi|255939616|ref|XP_002560577.1| Pc16g02040 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585200|emb|CAP92874.1| Pc16g02040 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 649

 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 225/512 (43%), Gaps = 49/512 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G      A   
Sbjct: 14  ILVTSALPYVNNVPHLGNVVGSVLSADVFARYHKACGRRTLYICGTDEYGTATETKALEE 73

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++ +    + ++  +D+ +  +I +D F RT  ++H D  + ++K++ + G + +    
Sbjct: 74  KMSPEDLCAKYNKIHQDVYEWFNIGFDHFGRTPTQKHTDISQSIFKRLHENGYLGERTAE 133

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEEGYFFR 168
             +  +  ++  D  V        Y  A G Q     H        NP   ++      R
Sbjct: 134 QPFCEQHGSFLADRFVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKIDGAAPVRR 193

Query: 169 LSAY----QDKLLSYYE--SHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIK 219
            + +     DKL    E  +HP        RN  I   S++K GLK   ++R    WG+ 
Sbjct: 194 ETKHIHILLDKLQPEIEKWAHPAIEKGNWPRNSRIITESWLKEGLKGRGITRD-LKWGVP 252

Query: 220 IPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRFH 271
           +P +     ++YVW +A   Y + T  Y D+ +    K+W  P D+ +   +GKD + FH
Sbjct: 253 VPLEGYENKVLYVWFEACIGYPSITANYTDDWE----KWWRNPEDVQLWQFLGKDNVPFH 308

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           ++ +P   +       +   + +  ++ ++G K SKS G  +      E  V  D  RYF
Sbjct: 309 SVIFPGTQIGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGTNARETGVPADVWRYF 368

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ES 386
           L++      D  ++        N +L   +GNLV+R + ++   Y  +IP    FT  E+
Sbjct: 369 LLKNRPETGDTQFEWAPFVDSNNGELLAKLGNLVNRIIKLVTASYGSVIP---EFTVPET 425

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
               L   +  L++  E+++   +   +   + +    +    A +    L    P+RA+
Sbjct: 426 FNPFLEEVTEHLRQYHEDLEGAHLRAGVQTAMRIAEAGNGLIQANRLDNALIANEPERAA 485

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V+   + +I  L+ +   ++P  +  I + L
Sbjct: 486 AVVGTVLNLIHLLSSVFSPYMPATSKSILEQL 517


>gi|302417150|ref|XP_003006406.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354008|gb|EEY16436.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 679

 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 127/550 (23%), Positives = 231/550 (42%), Gaps = 74/550 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + +++A+ Y N  PH+G+    ++ ADV ARF R  G   +F  G+DE+G    
Sbjct: 10  VKGKNNVLVTSALPYVNNTPHLGNVIGSVLSADVFARFSRARGNPTIFICGSDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWKK--- 112
             A   GV  +    +     + + +  ++S+D F RT  ++      D  R LW+    
Sbjct: 70  TKALEEGVDPETLCRKYHAVHKGIYEWFNLSFDIFGRTPTEQQTEIVQDIFRKLWQNGYI 129

Query: 113 ----------------ISDK---------------GDIYKGCYSGWYSLRDEAYYN---- 137
                           ++D+               GD    C +    L  E        
Sbjct: 130 EERETTQPFCPVHHSFLADRFVEGECSLCGYNDARGDQCDKCGNLLDPLEPEPEAGNAKP 189

Query: 138 DDEVYKGADGQYYNAQ-----HNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIE 191
           DD++   A G   N +       P +  + +  F RL A ++ L+ +++ +  E      
Sbjct: 190 DDDIAAKATGWLINPRCKLDGAKPDK-KQTKHLFLRLDALKEPLIDWFKKASTEGAWSTS 248

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYIMYVWIDALTNYLT-TTGY 244
            +    +++  GLK   ++R    WG+ +P D         + YVW DA   Y++ T  Y
Sbjct: 249 AQTITQAWIDKGLKPRGITRD-LKWGVPVPTDVTGEDYAAKVFYVWFDACIGYVSITKNY 307

Query: 245 LDNPD--GSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHG 294
            D  D  G K + W   P ++ +   +GKD ++FH+  +PA  L  N    K  K+ +  
Sbjct: 308 TDGADLAGKKWEQWWKNPDEVKLYQFLGKDNVQFHSTVFPASQLGTNENWTKVHKISATE 367

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           ++ ++G K SKS G  +   +V +E GV  D  RY+L+       D  +    L    N 
Sbjct: 368 YLNYEGGKFSKSRGVGVFGNQV-QETGVPSDVWRYYLLSRRPETSDSEFMWQELVDGNNN 426

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLI 410
           +L   +GN   R +       D  +P    F  +D  ++ +   +  L+E   NM+    
Sbjct: 427 ELLKNLGNFCQRVIKFAQAKLDTTVPDYTKFGLNDYLKNHVKEVNVNLKEYIANMEGTKF 486

Query: 411 HRALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              L  ++S+ +  ++   D +   +L    PDR + ++ + +  I  +A +L  ++P  
Sbjct: 487 RDGLRSILSISALGNKLLQDNKLDNKLLTEEPDRCAAIIGLALNQIALIASILNPYMPVT 546

Query: 470 ANKIFDILFV 479
           +  IF+ L V
Sbjct: 547 SKAIFEQLGV 556


>gi|310797897|gb|EFQ32790.1| methionyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 674

 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 225/548 (41%), Gaps = 70/548 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV AR+ R  G   ++  G+DE+G    
Sbjct: 9   VKGKNNVLITSALPYVNNVPHLGNIIGSVLSADVFARYSRARGNPTVYVCGSDEYGTATE 68

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWKK--I 113
             A   GVT      +     + + D  DIS+D F RT   +      D    LWK   I
Sbjct: 69  TKALEEGVTPSELCAKYHALHKGIYDYFDISFDIFGRTPTPQQTEIVQDIFTKLWKNGFI 128

Query: 114 SDKGDIYKGC----YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE------ 163
            ++      C    +  + + R          Y GA G   +   N +  +E E      
Sbjct: 129 EERETTQPFCPVEAHQSFLADRFVEGVCSICAYDGARGDQCDKCGNLLDPLEPEPEANAT 188

Query: 164 ----------GY---------------------FFRLSAYQDKLLSYY-ESHPEFILPIE 191
                     G+                     F RL + +D+L+ ++ ES  +      
Sbjct: 189 AEDDIAAKPTGFLIKPRCKLDGATPEKRKTKHLFLRLDSLRDELVKWFKESSKKGAWSNN 248

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQYIMYVWIDALTNYLT-TTGY 244
                 +++  GLK   ++R    WG+ IP      D  + + YVW DA   Y++ T  Y
Sbjct: 249 AEQITQAWIDKGLKPRGITRD-LKWGVPIPTHEVGQDYAKKVFYVWFDACIGYVSITKNY 307

Query: 245 LDNPD--GSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHG 294
            D  D  G K + W   P D+ +   +GKD ++FH I +P  L+       K  K+ +  
Sbjct: 308 TDGDDLAGKKWEQWWKNPDDVKLYQFMGKDNVQFHTIIFPGSLIGTGENWTKLHKISTTE 367

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           ++ ++G K SKS G  +   +V +  V VD  RY+L+       D  +    +    N +
Sbjct: 368 YLNYEGGKFSKSRGVGVFGNQVQQTGVPVDVWRYYLLSRRPETSDSEFMWQEMVDGNNNE 427

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHR 412
           L   +GN   R         DG++P    +T+   +  +   + +L+E   NM+   +  
Sbjct: 428 LLKNLGNFCQRVNKFCQAKTDGVVPDYTKYTDDYLKKHIGEVNTLLKEYISNMEATKMRA 487

Query: 413 ALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            L  ++S+ +  ++   D +    L    PDR + V+ + +  I  LA L+  ++P  + 
Sbjct: 488 GLQTIMSISALGNKLLQDNKLDNRLLTEEPDRCAAVVGLALNQIDLLASLVAPYLPNTST 547

Query: 472 KIFDILFV 479
            I   L V
Sbjct: 548 AILKQLGV 555


>gi|149238245|ref|XP_001524999.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451596|gb|EDK45852.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 755

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 227/522 (43%), Gaps = 51/522 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + +F  GTDE+G      
Sbjct: 189 DERNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNAIFICGTDEYGTATETK 248

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-IY 120
           A   GVT +   D+  +  + + D  DI +D F RTT     +  + ++KK+ DKG+ + 
Sbjct: 249 ALEDGVTPQQLCDKYHKIHKQVYDWFDIGFDYFGRTTTPLQTEIAQDIFKKL-DKGEYLE 307

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEG----- 164
           +      Y     ++  D  V        Y+ A G   +      +P++ +E        
Sbjct: 308 EKTTEQLYCEHHHSFLADRFVEGICPKCGYEDARGDQCDKCGQLLDPLELIEPRCKVDGT 367

Query: 165 ---------YFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     + +L+  +  L  + + S  +       +    S++K GL+   ++R   
Sbjct: 368 KPIVKPSTHIYLKLNELETPLKEWVDISSEKGAWSKNSKTITNSWIKQGLEPRCITRD-L 426

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFW------PADL---H 261
            WG  +P  P Y   ++YVW DA   Y++ T  Y  + D S    W      P ++    
Sbjct: 427 KWGTPVPR-PGYEDKVLYVWFDATIGYVSITANYFKSIDESSVDNWQKWWKNPENVDLYQ 485

Query: 262 VIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA  +    N      + +  ++ ++G K SKS G  +      EE
Sbjct: 486 FMGKDNVPFHTVVFPASQIGTGDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNA-EE 544

Query: 320 VGVDA--LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            GV A   RY+L        D  +  D    + N++L   +GN V+R V   +  Y+G++
Sbjct: 545 TGVPASVWRYYLASSRPETSDAHFSWDDFVTKNNSELLANLGNFVNRIVKFAIAKYNGVL 604

Query: 378 PTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWE 435
           P        + +  L+  + +L    +NM+   + + L   + + S  +++    K    
Sbjct: 605 PQYDTKNIPNYDQFLTDINTLLGTYIKNMEAVNLRKGLETAMLISSRGNQFLQENKLDNT 664

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    PD++  V+ + + ++  ++ ++  F+P    KI +IL
Sbjct: 665 LYNEYPDKSDAVVAIGLNLVYLVSAVISPFMPDTTKKINEIL 706


>gi|256078304|ref|XP_002575436.1| methionine-tRNA synthetase [Schistosoma mansoni]
 gi|238660675|emb|CAZ31669.1| methionine-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 593

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/510 (22%), Positives = 210/510 (41%), Gaps = 79/510 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+     + A+V A +  L G +VL   GTDE+G      A + 
Sbjct: 51  VMITSALPYVNNVPHLGNMIGSTLSANVFALYCDLAGYNVLSICGTDEYGTATEAKAVSE 110

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +   D+  +   D+     I +D F RTT  +H +  + ++K++ DKG I +    
Sbjct: 111 NMTPRQICDKFHKLHCDIYKWFQIEFDYFGRTTTDQHTEIVQEVFKRLWDKGFITEDSVE 170

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQ---HNPVQWME------------- 161
             Y  +   +  D  V        Y  A G   +      N V+ +E             
Sbjct: 171 QLYCEKCSKFLADRFVEGVCPLCKYHDARGDQCDKCGRLMNAVELIEPRCKMCSQKPVVR 230

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWG 217
                F  L   ++KL ++ E        +   N      S+++ GLK   ++R    WG
Sbjct: 231 SSRHLFLDLPKIENKLNTFVEQRINDSSCVWTSNACTISSSWLRDGLKPRCITRD-LHWG 289

Query: 218 IKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD------LHVIGKDIL 268
           + +P +     + YVW DA   Y++ T    N      ++W P+D         + KD +
Sbjct: 290 VPVPLEAYKDKVFYVWFDATIGYMSITA---NYTKHWKQWWQPSDNNEIELFQFMAKDNV 346

Query: 269 RFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FHAI +PA LL+A+    L K + S  ++ ++  K SKS G                  
Sbjct: 347 PFHAIVFPACLLAADAGYTLVKHLLSTEYMNYENTKFSKSRG------------------ 388

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
                       G +  D +K  V +D    +      S+S + + ++ +IP+       
Sbjct: 389 -----------IGVFGDDAMKSGVISD----VWRFYLLSLSFVSRFFNSIIPSITKLEPV 433

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL--KKTNPDRA 444
           D   L+  +++      NM++  +  A+  V+++    + YF A +PW    K    +R+
Sbjct: 434 DTEFLARINKLFATYIHNMESCHLRDAIRNVLTIARLGNGYFQANQPWVAVKKPETKERS 493

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+ V   +   L  ++  F+P +  +I+
Sbjct: 494 GVVISVAANIACLLGAMIYPFMPTIGKQIW 523


>gi|315274509|ref|ZP_07869421.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615859|gb|EFR89075.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 330

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 106/192 (55%), Gaps = 10/192 (5%)

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L+RE+  G DG +  +    RVN DLAN +GNL++R+V+MI K +DG IP   G  TE
Sbjct: 1   YYLLREVPFGSDGLFTPEDFVDRVNYDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTE 60

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA- 444
            D++++   + V++E   +M +     AL Q+ SLVS  ++Y D   PW L K    RA 
Sbjct: 61  FDQTLVDFKNNVVKEYESSMDHMQFSVALNQLWSLVSRTNKYIDETAPWALAKDEDKRAE 120

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKPGFM 498
            ++V+    E +R +A+LLQ F+ +   +IF  L + +EN   +  D       +  G  
Sbjct: 121 LASVMTHLAETLRIIAVLLQPFLTRTPGEIFLQLGLQEEN--LKKWDSIYGYGEIPAGTT 178

Query: 499 LHKTFDPIFPRF 510
           + K   PIFPR 
Sbjct: 179 VVKKGTPIFPRL 190


>gi|169763032|ref|XP_001727416.1| methionyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238488877|ref|XP_002375676.1| methionyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|83770444|dbj|BAE60577.1| unnamed protein product [Aspergillus oryzae]
 gi|220698064|gb|EED54404.1| methionyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 625

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 231/517 (44%), Gaps = 50/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    +++A+ Y N  PH+G+     + ADV AR+ R  G + L+  GTDE+G      A
Sbjct: 14  KRNFLVTSALPYVNNVPHLGNLIGSTLSADVFARYGRGRGANTLYVCGTDEYGTTSEARA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +TTK   D+      ++    +IS+D F RTT +      + ++ K+ D G + + 
Sbjct: 74  IQENMTTKELCDKYYALHAEVYKWFNISFDIFGRTTTELQTKITQDIFLKLHDNGFLSEH 133

Query: 123 CYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN-------------------------P 156
             +  Y    +++  D  +  +    +Y +A  +                         P
Sbjct: 134 VTTQLYCEEHKSFLADRFIQGECPHCKYIDAYGDQCDLCGQLLDPLDLIKPRCKLDGATP 193

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+  + +  F +L   Q ++ +++ ES  +       ++   S++  GL++ S++R    
Sbjct: 194 VK-RDTKHIFLKLDKLQPEIQAFFDESSAKGGWSQNGKDITSSWLTKGLQERSITRD-IK 251

Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKD 266
           WG ++P  P Y   ++Y W DA   Y++ T  Y D  +    K+W  P D+ +   IGKD
Sbjct: 252 WGTQVPL-PGYEEKVIYSWFDACIGYVSITANYTDQWE----KWWRNPEDVELYQFIGKD 306

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + +H++ +P   +       K   + +  ++ ++G K SKS G  V         +  D
Sbjct: 307 NVAYHSVMFPGTEIGTREKWLKVHHLSTTEYLTYEGGKFSKSRGIGVFGDSAKKTGIPAD 366

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGA 382
             RY+L+       D  ++ D      N  L   +GN VSR V  +  K+YD ++P   A
Sbjct: 367 VWRYYLLSHRPETGDSEFNWDLFISSNNNILLKNLGNFVSRVVKFVNSKNYDNIVPDYTA 426

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
           +TE   ++     + +L +  + +    I  A+  V+++  + + +  +     +L +  
Sbjct: 427 YTEPAFDAWKEEVNELLTQYIQQLDAVKIRAAIDTVLTISQKGNLFLQSNSLDNKLAENE 486

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P + + V+ + + +I  L+ LL  ++P+ A  I +IL
Sbjct: 487 PAKCAAVIGLALNLIHLLSALLAPYMPETAASINEIL 523


>gi|156549927|ref|XP_001602511.1| PREDICTED: similar to ENSANGP00000010004 [Nasonia vitripennis]
          Length = 968

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 224/523 (42%), Gaps = 48/523 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  + + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+ +GTDE+G     
Sbjct: 260 KGEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYISGTDEYGTATEA 319

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +   D+      D+     I +D F RTT     +  + ++ +I ++G I 
Sbjct: 320 KALEEKLTPQQICDKFFDIHNDIYRWFSIGFDYFGRTTTPEQTEIVQAMFLRIKEQGYIL 379

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
                     + E +  D  V        Y+ A G   +   + V   E           
Sbjct: 380 PKTVDQLLCEKCERFLADRFVEGTCPRCKYEDARGDQCDGCGHLVNATELINPRCKVCST 439

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +F  L   Q+ L   + +  E       R     +++ GLK   ++R    
Sbjct: 440 KPVIKASTQFFLDLPKIQEGL-KQWATEAEGGWSSVARAVTKPWLRDGLKPRCITRD-LK 497

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDN-------PDGSKAKFWPADLHVIGKD 266
           WGI +P D     + YVW DA   YL+ T            P+G     +      + KD
Sbjct: 498 WGIPVPLDGYRDKVFYVWFDAPLGYLSITKKYTKEFEKWWKPNGVDVSLY----QFMAKD 553

Query: 267 ILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FHAI +PA LL+A+    L + + +  ++ ++  K SKS G  +   +  +  +  D
Sbjct: 554 NVPFHAIMFPATLLAADQGHTLVRHIMATEYLNYEDTKFSKSRGIGVFGTDARDTGIPAD 613

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L        D  ++   L  + N++L N +GN V+R++    K+++  IP     
Sbjct: 614 VWRFYLAYIRPETMDSNFNWVDLATKNNSELLNNLGNFVNRALMFAEKNFNSKIPE-MEL 672

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPD 442
            E D  +L++  R L      ++   +  +L  ++++    ++Y  +Q+PW ++K +  D
Sbjct: 673 LEDDLHVLALVQRELTSYITLLEQARLRDSLRHILAISKHGNQYMQSQQPWVKVKGSEED 732

Query: 443 --RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             + +TV+ V   +   L+ LL  F+P  A ++   L +  +N
Sbjct: 733 KKKGATVIGVCCNLACLLSALLAPFMPNTARELRAQLGLPKQN 775


>gi|121702181|ref|XP_001269355.1| methionyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397498|gb|EAW07929.1| methionyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 651

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/519 (22%), Positives = 228/519 (43%), Gaps = 53/519 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD  AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADAFARYHKACGRQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  K+H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTKQHTEISQAIFKRLYDNGYLT 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEE 163
           +      Y     ++  D  V        Y+ A G Q     H         P   ++  
Sbjct: 131 EKTAEQPYCETHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPE-FILPI--------ERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E ++LP           R+   +++K GLKD  ++R   
Sbjct: 191 TPVRRPTKHIHLLLDKLQPEIEKWVLPAMEEGNWPKNSRDITKAWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266
            WG+ +P  P +   ++YVW +A   Y + T    N      ++W  P ++ +   +GKD
Sbjct: 250 KWGVPVPL-PGFENKVLYVWFEACIGYPSITA---NYTSEWEQWWRNPEEVQLYQFLGKD 305

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH++ +P   L       +   + +  ++ ++G K SKS G  V         V  D
Sbjct: 306 NVPFHSVIFPGCELGTKDKWTMLHHLSTAEYLNYEGGKFSKSRGIGVFGNNAKQTGVPPD 365

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TP 380
             RY+L++      D  ++        N++L   +GNLV+R V ++   Y+ +IP    P
Sbjct: 366 VWRYYLLKNRPETGDTQFEWRAFVDCNNSELLAKLGNLVNRVVKLVAASYNSIIPEFTVP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKK 438
            +F  + + I S   + ++E+ +      ++ A  LA+  + + + +R  +      L  
Sbjct: 426 ESFQPNLDEITSTLRQYIEEMEDVHLRAGVNTAMRLAEAGNGLIQANRLDNT-----LIA 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             P+ A+ V+   + +I  L+ +   ++P  +  I + L
Sbjct: 481 NEPEHAAAVVGTVMNLIYLLSSVFAPYLPATSKSILEQL 519


>gi|238882844|gb|EEQ46482.1| methionyl-tRNA synthetase [Candida albicans WO-1]
          Length = 748

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 226/517 (43%), Gaps = 44/517 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G      
Sbjct: 185 DERNILITSALPYVNNVPHLGNIIGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATETK 244

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+ +KG + +
Sbjct: 245 ALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTSLQTEIAQDIFLKLHNKGYLEE 304

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160
                 Y    +++  D  V        Y+ A G   +   N   P++ +          
Sbjct: 305 KTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGNT 364

Query: 161 ----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               E    + +L+  ++ L  +  +S  +       +N   S++K GL+   ++R    
Sbjct: 365 PVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSRNSKNITDSWIKRGLEPRCITRDLI- 423

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGKD 266
           WG  +P       ++YVW DA   Y++ T   + D+      K+W    +V     +GKD
Sbjct: 424 WGTPVPLKGYDNKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWKNPENVDLYQFMGKD 483

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323
            + FH + +PA  +       K   + +  ++ ++  K SKS G  +      +E GV  
Sbjct: 484 NVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542

Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N++L   +GN V+R V  ++  Y+G+IP    
Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440
               D +   +  + +L    +NM+N  + + L   +++ S  +++  D +    L    
Sbjct: 603 KNIPDYDKFETDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P ++  V+ V + ++  ++ ++  F+P+   KI  IL
Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTVKIDQIL 699


>gi|302498134|ref|XP_003011065.1| hypothetical protein ARB_02587 [Arthroderma benhamiae CBS 112371]
 gi|291174613|gb|EFE30425.1| hypothetical protein ARB_02587 [Arthroderma benhamiae CBS 112371]
          Length = 650

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 226/518 (43%), Gaps = 53/518 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G      A
Sbjct: 13  KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + + 
Sbjct: 73  LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156
                +  + +++  D  V        Y  A G Q    QH                  P
Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           ++  + +  F  L   Q ++ ++  +  E    P   R    S++K GL+   ++R    
Sbjct: 193 IR-RKTKHIFLLLDKLQPEIENWVATAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           WG+ +P D   + ++YVW +A   Y + T    N      K+W  P D+ +   +GKD +
Sbjct: 251 WGVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRNPEDVQLYQFLGKDNV 307

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FHA+ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  
Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L++      D  ++        N +L   +GNLV+R V ++   K Y  +IP    F
Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIP---EF 424

Query: 384 TESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
           T S+    ++  V S + Q I E M+   +   +   + +    +    A K    L   
Sbjct: 425 TVSEPFYPALEEVTSLLRQYINE-MEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIAN 483

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            P+RA+ V+ + V +I   + +   ++P  +  I D L
Sbjct: 484 EPERAAAVVGIVVNLIHLCSSVFCPYLPATSASILDQL 521


>gi|68467731|ref|XP_722024.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
 gi|68468050|ref|XP_721864.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
 gi|46443806|gb|EAL03085.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
 gi|46443971|gb|EAL03249.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
          Length = 748

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 226/517 (43%), Gaps = 44/517 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G      
Sbjct: 185 DERNILITSALPYVNNVPHLGNIIGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATETK 244

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+ +KG + +
Sbjct: 245 ALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTSLQTEIAQDIFLKLHNKGYLEE 304

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160
                 Y    +++  D  V        Y+ A G   +   N   P++ +          
Sbjct: 305 KTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGNT 364

Query: 161 ----EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               E    + +L+  ++ L  +  +S  +       +N   S++K GL+   ++R    
Sbjct: 365 PVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSRNSKNITDSWIKRGLEPRCITRDLI- 423

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGKD 266
           WG  +P       ++YVW DA   Y++ T   + D+      K+W    +V     +GKD
Sbjct: 424 WGTPVPLKGYDNKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWKNPENVDLYQFMGKD 483

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323
            + FH + +PA  +       K   + +  ++ ++  K SKS G  +      +E GV  
Sbjct: 484 NVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542

Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N++L   +GN V+R V  ++  Y+G+IP    
Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440
               D +   +  + +L    +NM+N  + + L   +++ S  +++  D +    L    
Sbjct: 603 KNIPDYDKFENDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P ++  V+ V + ++  ++ ++  F+P+   KI  IL
Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTVKIDQIL 699


>gi|170577156|ref|XP_001893903.1| methionyl-tRNA synthetase [Brugia malayi]
 gi|158599817|gb|EDP37273.1| methionyl-tRNA synthetase, putative [Brugia malayi]
          Length = 940

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 232/529 (43%), Gaps = 62/529 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ ADV +R+  L G   LF  GTDE+G      A 
Sbjct: 29  KNILITSALPYVNNVPHLGNIVGCVLSADVFSRYCYLKGWRRLFICGTDEYGTATETKAI 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG- 122
             G+T +   D+       +    +I +D F RTT +   +  + ++ K+   G      
Sbjct: 89  QEGLTPRQICDKYHAIHAKIYKWFNIDFDHFGRTTTQHQTELTQEIFLKLHKNGFTSTDT 148

Query: 123 -----CYSGWYSLRDE--------AYYNDDEVYKG-ADGQYYNAQH--NPVQWMEEEGYF 166
                C S    L D          +++D    +  A G+  NA    NP   + +    
Sbjct: 149 VDQLHCDSCSRFLADRFVCGECPHCHFDDARGDQCDACGKLINAVELINPRCHLCKATPI 208

Query: 167 FRLSAY----QDKLLSYYESHPEFILPIERRN---EVISFVKS----GLKDLSLSRKTFD 215
            + S +     DKL    E H    L + +       IS  KS    GL+   ++R    
Sbjct: 209 VKPSNHIFLHLDKLADKVEKHLNEQLNLGKNQWSPNAISIAKSWLKGGLEKRCITRD-LK 267

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLH-VIGK----- 265
           WG+ +P +     + YVW DA   YL+ T      D S+    P+  DL+  +GK     
Sbjct: 268 WGVSVPLESFSNKVFYVWFDAPIGYLSITKEYLGEDWSQWWKNPSIVDLYNFVGKVAYFF 327

Query: 266 ----DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISK-SLGNVIDPIE--- 315
               D + FHA+ +PA  +    N  +  ++ +  ++ ++  K SK     + D  +   
Sbjct: 328 VPFHDNVAFHAVMFPATQIGTGDNYTVVNRLCATEYLNYESMKFSKHGFAFLFDIFQSRG 387

Query: 316 ------VIEEVGVDA--LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
                 +  E G+DA   R++L+      +D  +  D    +VN +L N +GN V+R++ 
Sbjct: 388 TGVFGDMAAETGIDADIWRFYLLYIRPETQDTSFSWDDFSLKVNTELLNNLGNFVNRALI 447

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            + K +DG++P      E D+++L+  S  L +    + +  +   + +V+S+    + Y
Sbjct: 448 FLSKYFDGVVPD-MHLQEQDKALLAQVSSDLSDFDLCLSSVKLRDGIVKVLSISRHGNLY 506

Query: 428 FDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             + +PW L K + +   RA TV+ +   +   +A++L  ++P ++ KI
Sbjct: 507 IQSTQPWVLIKGSENDRKRAGTVIGIVANLAYLIAVMLYPYMPSISAKI 555


>gi|302667056|ref|XP_003025122.1| hypothetical protein TRV_00701 [Trichophyton verrucosum HKI 0517]
 gi|291189205|gb|EFE44511.1| hypothetical protein TRV_00701 [Trichophyton verrucosum HKI 0517]
          Length = 650

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 224/517 (43%), Gaps = 51/517 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G      A
Sbjct: 13  KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + + 
Sbjct: 73  LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEEEGY 165
                +  + +++  D  V        Y  A G Q    QH        NP   ++    
Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192

Query: 166 FFRLSAY----QDKLLSYYESHPEFIL-----PIERRNEVISFVKSGLKDLSLSRKTFDW 216
             R + +     DKL    E+           P   R    S++K GL+   ++R    W
Sbjct: 193 IRRKTKHIFLLLDKLQPDIENWAATAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LKW 251

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILR 269
           G+ +P D   + ++YVW +A   Y + T    N      K+W  P D+ +   +GKD + 
Sbjct: 252 GVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRNPEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFT 384
           Y+L++      D  ++        N +L   +GNLV+R V ++   K Y  +IP    FT
Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIP---EFT 425

Query: 385 ESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
            S+    ++  V S + Q I E M+   +   +   + +    +    A K    L    
Sbjct: 426 VSEPFYPALEEVTSLLRQYINE-MEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANE 484

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P+RA+ V+ + V +I   + +   ++P  +  I D L
Sbjct: 485 PERAAAVVGIVVNLIHLCSSVFCPYLPATSASILDQL 521


>gi|50287813|ref|XP_446336.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525643|emb|CAG59260.1| unnamed protein product [Candida glabrata]
          Length = 750

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 223/516 (43%), Gaps = 44/516 (8%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE E+ + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G    
Sbjct: 191 KEGERNILITSALPYVNNVPHLGNIVGSVLSADIFARYCKSRNYNTLFICGTDEYGTATE 250

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GV+ +   D+  +   D+     I +D F RTT ++  +  + ++ K+   G +
Sbjct: 251 TKAIEEGVSPRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEQQTEIAQDIFLKLDKNGYL 310

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---------NPVQWME- 161
            +      Y     ++  D  V        Y+ A G   +            NP   ++ 
Sbjct: 311 GEESMKQLYCPVHNSFLADRYVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDN 370

Query: 162 -------EEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                   +  F  L   + ++  + E +  E       +    S++K GLK   ++R  
Sbjct: 371 AIPEPKTSDHIFLALDKLEPEIKKWVEKASTEGEWSKNSKTITNSWLKDGLKPRCITRDL 430

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKD 266
             WG  +P +     ++YVW DA   Y++ T    N   +  ++W  P D+ +   +GKD
Sbjct: 431 V-WGTPVPLEKYKDKVLYVWFDATIGYVSITA---NYTKNWEQWWKKPEDVKLYQFMGKD 486

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH + +P   L  N    +   + +  ++ ++G K SKS G  V         +   
Sbjct: 487 NVPFHTVVFPGSQLGTNDEWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAQDSGISPS 546

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             RY+L        D  +  D    R N++L   +GN V+R +  +   Y+G+IP     
Sbjct: 547 VWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRIIKFVNAKYNGVIPKFDTK 606

Query: 384 TESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
              + +S++S  + +L+   + M+     R L   +SL +  +++    K    L   +P
Sbjct: 607 NLPNYDSLVSDINEILRNYVKEMETAHERRGLEIAMSLSARGNQFLQENKLDNSLFSQHP 666

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +++  V+ V + ++  +A L+  F+P+ A  I  +L
Sbjct: 667 EKSDAVVGVGLNIVYAVASLIYPFMPETAETINRML 702


>gi|3924|emb|CAA24627.1| tRNA synthetase [Saccharomyces cerevisiae]
 gi|151943538|gb|EDN61849.1| methionyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|323308896|gb|EGA62129.1| Mes1p [Saccharomyces cerevisiae FostersO]
          Length = 751

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +    
Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164
             Y     +Y  D  V       +Y+           A  +P + +           E  
Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377

Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           Y    F  L   + ++  + E +  E       +    S++K GLK   ++R    WG  
Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272
           +P +     ++YVW DA   Y++ T    N      ++W    HV     +GKD + FH 
Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P   L    N  +   + +  ++ ++  K SKS G  V         +     RY+L
Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
                   D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   +  D
Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446
             ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++  
Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ V + +I  ++ ++  ++P++  KI  +L
Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703


>gi|323348501|gb|EGA82746.1| Mes1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 751

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +    
Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164
             Y     +Y  D  V       +Y+           A  +P + +           E  
Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377

Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           Y    F  L   + ++  + E +  E       +    S++K GLK   ++R    WG  
Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272
           +P +     ++YVW DA   Y++ T    N      ++W    HV     +GKD + FH 
Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P   L    N  +   + +  ++ ++  K SKS G  V         +     RY+L
Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
                   D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   +  D
Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446
             ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++  
Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ V + +I  ++ ++  ++P++  KI  +L
Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703


>gi|6321704|ref|NP_011780.1| Mes1p [Saccharomyces cerevisiae S288c]
 gi|1711639|sp|P00958|SYMC_YEAST RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1323481|emb|CAA97293.1| MES1 [Saccharomyces cerevisiae]
 gi|1536956|emb|CAA69086.1| methionine--tRNA ligase [Saccharomyces cerevisiae]
 gi|190406732|gb|EDV09999.1| methionine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|259146765|emb|CAY80022.1| Mes1p [Saccharomyces cerevisiae EC1118]
 gi|285812454|tpg|DAA08354.1| TPA: Mes1p [Saccharomyces cerevisiae S288c]
          Length = 751

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +    
Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164
             Y     +Y  D  V       +Y+           A  +P + +           E  
Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377

Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           Y    F  L   + ++  + E +  E       +    S++K GLK   ++R    WG  
Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272
           +P +     ++YVW DA   Y++ T    N      ++W    HV     +GKD + FH 
Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P   L    N  +   + +  ++ ++  K SKS G  V         +     RY+L
Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
                   D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   +  D
Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446
             ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++  
Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ V + +I  ++ ++  ++P++  KI  +L
Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703


>gi|256272650|gb|EEU07627.1| Mes1p [Saccharomyces cerevisiae JAY291]
          Length = 751

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 214/511 (41%), Gaps = 45/511 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +    
Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYN-----------AQHNPVQWME----------EEG 164
             Y     +Y  D  V       +Y+           A  +P + +           E  
Sbjct: 318 QLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPK 377

Query: 165 Y----FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           Y    F  L   + ++  + E +  E       +    S++K GLK   ++R    WG  
Sbjct: 378 YSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV-WGTP 436

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272
           +P +     ++YVW DA   Y++ T    N      ++W    HV     +GKD + FH 
Sbjct: 437 VPLEKYKDKVLYVWFDATIGYVSITS---NYTKEWKQWWNNPEHVSLYQFMGKDNVPFHT 493

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P   L    N  +   + +  ++ ++  K SKS G  V         +     RY+L
Sbjct: 494 VVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
                   D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   +  D
Sbjct: 554 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYD 613

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAST 446
             ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++  
Sbjct: 614 -GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDA 672

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ V + +I  ++ ++  ++P++  KI  +L
Sbjct: 673 VVAVGLNIIYAVSSIITPYMPEIGEKINKML 703


>gi|330790515|ref|XP_003283342.1| methionyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325086767|gb|EGC40152.1| methionyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 720

 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 224/550 (40%), Gaps = 73/550 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+     + ADV AR+ RL   +V++  GTDE+G      A   
Sbjct: 18  ILITSALPYVNNVPHLGNLVGSTLSADVYARYCRLKNYNVIYIWGTDEYGTATETKALQE 77

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T K   D+  +  +++ +  +IS+D F              ++KK++D G        
Sbjct: 78  KCTPKEICDKYHKIHKEIYEWFNISFDKF-------------DIFKKLNDNGYTLTQEIE 124

Query: 126 GWYSLRDEAYYNDDEVYKG--ADGQYYNAQH----------NPVQWMEEEGYFFRLSAYQ 173
             Y  +    +  D   +G     QY +A+           NP   +       R     
Sbjct: 125 QLYCEQTCKMFLADRYVEGICPHCQYEDARGDQCDKCTKLLNPTDLINP-----RCKMCS 179

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-------------------- 213
              +     H    LP + ++ V  FVK    D + S  +                    
Sbjct: 180 KPPIIKSTKHIFIDLP-QLQSSVQEFVKRNSADGNWSENSIQITKTWVDGELKPRCITRD 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVI---GKD 266
             WG  +P +   + + YVW DA   Y++ T           K+W  P D+ ++   GKD
Sbjct: 239 LKWGTPVPLEEFKEKVFYVWFDAPIGYISITAEYTK---DWEKWWKNPEDVKLVQFMGKD 295

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322
            + FH + +PA  +    +  L   + +  ++ ++  K SKS G  +   +  +  G+  
Sbjct: 296 NVPFHTVIFPASQIGTKDSYTLLNNLSTTEYLNYETGKFSKSRGTGVFG-DGAKNTGIPS 354

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           +  R++L+       D  +  D    + N +L N  GNLV+R + MI   Y G +PT   
Sbjct: 355 EVWRFYLLSNRPESSDSVFSWDDFNAK-NNELLNNFGNLVNRVLKMISTTYQGTVPTIDN 413

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               E+D   ++  ++ L +  ++++   +   L   +++    + Y    KPWE  K  
Sbjct: 414 TKLNEADHKFINEVNQNLDQYFKSLEEISLKEGLKITMAISKLGNSYMQENKPWEGDK-- 471

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            +R++ VL V   +I+ LA L + ++P L ++I   L V       +     +  G  L 
Sbjct: 472 -ERSALVLAVLTNLIKLLATLFEPYIPSLTDRIHQQLNVEPTKYSTKFDLHAIPGGHELS 530

Query: 501 KTFDPIFPRF 510
           K  +P+  + 
Sbjct: 531 KQIEPLVKKI 540


>gi|321258022|ref|XP_003193784.1| methionyl-tRNA synthetase; Mes1p [Cryptococcus gattii WM276]
 gi|317460254|gb|ADV21997.1| Methionyl-tRNA synthetase, putative; Mes1p [Cryptococcus gattii
           WM276]
          Length = 724

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 131/576 (22%), Positives = 236/576 (40%), Gaps = 99/576 (17%)

Query: 4   REKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+     + ADV AR++R   +  L+  GTDE+G      A
Sbjct: 30  QRNVLITSALPYVNNVPHLGNIIGSTLSADVFARYNRTLNVPTLYICGTDEYGTATETKA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT      +  +   ++ +   IS+D + RT+   H +  + ++K++ D G +++ 
Sbjct: 90  LEEGVTPYELCTKFHKLHTEIYEWFQISFDKWGRTSTPEHTEITQGIYKRLHDNG-LFR- 147

Query: 123 CYSGWYSLRDEAYYNDDEVY---KGADGQYYNAQHN----------------PVQWMEEE 163
                    D+ Y  DDE++   +  +G   N  ++                P Q +   
Sbjct: 148 -----LETSDQTYCEDDELFLADRFVEGTCPNCGYDDARGDQCDKCALTFSSPTQLINPR 202

Query: 164 G---------------YFFRLSAYQDKLLSYYESHP-----EFILPIERRNEVIS--FVK 201
                             +RL   Q +L+ + +             I  + E++    + 
Sbjct: 203 CKRNKAHTLSVRPSTHACYRLDLLQPRLVEWMQDARVKGKWGTNAVITDKGEIVEPRMLG 262

Query: 202 SGLKDLSLSRKTFDWGIKIP---DDPQ------YIMYVWIDALTNYLTTTG-YLDNPDGS 251
            GL+  +++R    WG+++P   D+ +       ++YVW DA   Y + T  Y D  +  
Sbjct: 263 EGLRPSAVTRD-LKWGVEVPKVGDEEEDKAMEGKVIYVWFDAPIGYPSITATYTDKWE-- 319

Query: 252 KAKFW--PADLHV---IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKIS 304
             K+W  P ++ +   +GKD + FH + +PA LL    P  +   + S  ++ ++  K S
Sbjct: 320 --KWWKNPDNVELYQFMGKDNVYFHTVLFPATLLGTKEPWTMLHTISSTQYLNYEDTKFS 377

Query: 305 KS-----LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           KS      GN         EV     RY+L+ +     D  +         N +L   +G
Sbjct: 378 KSRNIGVFGNNARETGQPPEV----WRYYLLSQRPENSDSSFLWSKFIAANNNELLANLG 433

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFT---------ESDESILSVCSRVLQEIRENMQNQLI 410
           N V+R V  I    D  +P P  F           SD   ++  +  L+E RE M +  +
Sbjct: 434 NFVNRVVKFINAKLDSKVPGPEGFAGGEVVPPSDSSDFDFVTDVNTRLKEYREQMDDTKL 493

Query: 411 HRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              LA  ++L +  ++Y         L  + P+R + VL   V +I  L+++   F+P  
Sbjct: 494 RGGLATAMALSARGNQYLQENSLDNALLASKPERCAEVLLNAVNLIYILSVVFHPFMPNT 553

Query: 470 ANKIFDILFVADENRCFQSLDQRLK----PGFMLHK 501
           +  I   L     N   +SL  +      PG +L K
Sbjct: 554 SEGILRQL-----NAPARSLPTKFSIDILPGHVLGK 584


>gi|50302967|ref|XP_451421.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640552|emb|CAH03009.1| KLLA0A09647p [Kluyveromyces lactis]
          Length = 777

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 122/549 (22%), Positives = 236/549 (42%), Gaps = 63/549 (11%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE E+ + I++A+ Y N  PH+G+    ++ AD+ +RF +    + L+  GTDE+G    
Sbjct: 218 KEGERNILITSALPYVNNVPHLGNIVGSVLSADIYSRFAKGRNYNALYICGTDEYGTATE 277

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +   D+  +   D+     I +D F RTT ++     + ++ K+ D+G +
Sbjct: 278 TKALEDGVTPRELCDKYHKVHSDVYKWFQIGFDYFGRTTTEKQTAIAQDIFMKLYDRGFL 337

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWME------- 161
            +      Y    + Y  D  V        Y+ A G   +   A  NP + ++       
Sbjct: 338 EEQTMKQLYCPAHKGYLADRYVEGTCPKCGYEDARGDQCDKCGALLNPFELIDPRCKLDD 397

Query: 162 -------EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                   +  F  L   + ++  +  E+  +       +    S++K GL    ++R  
Sbjct: 398 GVPEPRDSDHIFMSLDKLEPEIKKWVDEASSKGNWSKNSKTITQSWLKEGLHPRCITRDL 457

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGKD 266
             WG  +P  +  + ++YVW DA   Y++ T    N      ++W  P ++     +GKD
Sbjct: 458 V-WGTPVPLENYKEKVLYVWFDACIGYVSITANYTN---KWEQWWKNPNNIDLYQFMGKD 513

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEE 319
            + FH + +P   L    +  +   + +  ++ ++G K SKS      GN    I +   
Sbjct: 514 NVPFHTVIFPGSQLGTGDDWTMLHHLNTTEYLQYEGGKFSKSRSIGVFGNNAQEIGLSPS 573

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
           V     RY+L+       D  +       R N++L   +GN V+R V  +   Y+G++P 
Sbjct: 574 V----WRYYLISVRPETSDSQFSWSDFAARNNSELLANLGNFVNRVVKFVNAKYNGVVPD 629

Query: 379 -----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQK 432
                 PG + +  + I      +L    +NM+   + R L   ++L +  +++  D + 
Sbjct: 630 FNVDNLPG-YAQLKKDI----DEILTNYVDNMEKVHLRRGLEIAMTLSARGNQFLQDNKL 684

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
              L    P ++  V+ V + +I  +A ++  F+P+ +  I+ +L  A   R     +  
Sbjct: 685 DNSLFAQEPAKSDAVVGVALNIIYTVASIMSPFIPETSEIIYRML-NAPALRIDDHFNLP 743

Query: 493 LKPGFMLHK 501
           ++PG  ++K
Sbjct: 744 IRPGHNINK 752


>gi|291236811|ref|XP_002738331.1| PREDICTED: Methionyl-tRNA synthetase, mitochondrial-like
           [Saccoglossus kowalevskii]
          Length = 1208

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 19/222 (8%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNP 156
           + D+  +   K+   G IY+G Y GWYS+ DEA+  D +V    D      +  +   N 
Sbjct: 58  NSDSNLVELNKLVANGYIYEGKYCGWYSISDEAFITDKQVQDVTDKHGNVTKVSSETGNL 117

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214
           V+W EE+ Y FRLS +  ++  +   +P  I P +    +  ++  GL DLS+SR+    
Sbjct: 118 VEWTEEKNYVFRLSEFGPRIQRWLADNPNVIKPAKFTKVLHHWLNDGLPDLSVSRQRSRL 177

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
            WGI + +D    +YVW+DAL NYLT +GY       K+  WPA +H++GKDIL+  +I 
Sbjct: 178 KWGIPVANDNTQTIYVWLDALVNYLTVSGYPH-----KSYRWPA-VHLVGKDILKG-SIA 230

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            P      N+  P++      +  KG  +S   G+   P E 
Sbjct: 231 SPE---EGNVASPEEGIV--ALPEKGSDVSPEEGSDASPEEA 267



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 21/229 (9%)

Query: 303  ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
            +SKS GN+++P+E +++   D LRYFL+RE     DG Y  D + + +NA+L + +GNL+
Sbjct: 978  MSKSKGNIVNPLEKVKDFTTDGLRYFLLREGVPHSDGDYYDDKVVECLNAELCDTLGNLL 1037

Query: 363  SRSVSMILKDYDGMIPTPGAF-----------TESDESILSVCSRVLQEIRENMQNQLIH 411
            SR  +  L       P                T  D +++   + + + + +   N  +H
Sbjct: 1038 SRCTAKSLNPKQIFPPLDANLFPPVMKSGIKATRDDYNLIMKFTNLPECVHQYYINFEVH 1097

Query: 412  RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKL 469
            +A+ +++S + E + +    +PW L+K   D+   +TVL++ +E +R   ILLQ   P L
Sbjct: 1098 KAIKEIMSCLRETNAFIQRHEPWNLRKNAADQTWLNTVLHIAMETLRISGILLQPVAPNL 1157

Query: 470  ANKIFDILFVADENR------CFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            A+K+   L + + NR      CF SL  D  L  G  L      +F R 
Sbjct: 1158 ADKLLSRLGILNHNRTWSDLNCFSSLHADTCLNAGHSLGPDTGVLFTRI 1206


>gi|225678255|gb|EEH16539.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 653

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 244/563 (43%), Gaps = 66/563 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKI 58
           +K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   LF  GTDE+G   
Sbjct: 10  VKGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLFVCGTDEYGTAT 65

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A   GVT +    + ++  +D+ +  +I +D F RT   +H    + ++K++ + G 
Sbjct: 66  ETKALEEGVTPEELCAKYNKIHQDVYEWFEIGFDIFGRTPTAQHTQISQNIFKRLHENGF 125

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME 161
           + +      +  + +++  D  V        Y  A G Q     H        NP   ++
Sbjct: 126 LEEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLD 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILP-IERRN-----EVI--SFVKSGLKDLSLSRK 212
                 R + +   LL   +    E++ P IE+ N      VI  S++K GLKD  ++R 
Sbjct: 186 GATPVRRPTKHIHLLLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD 245

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IG 264
              WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +G
Sbjct: 246 -LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLG 300

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH++ +P   +       K   + +  ++ ++  K SKS G  V         + 
Sbjct: 301 KDNVPFHSVIFPGTQIGTRDKWTKLYHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P 
Sbjct: 361 PDVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438
               TE  E  L   + +L++    M++  +   L   + +V   +    A K    L  
Sbjct: 421 -FTVTEPFEPALEEITALLRQYISEMESVHLRAGLVTAMKIVEVGNGLIQANKLDNSLIA 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------- 491
           T P+RA+TV+ + V +I  ++ +   ++P  +  I   L V   N    SLD+       
Sbjct: 480 TEPERAATVVGIVVNLIYLISSIFSPYLPATSASILAQLNVPFRN--IPSLDELKEVGWR 537

Query: 492 --RLKPGFMLHKT---FDPIFPR 509
              +KPG  + K    F  I P+
Sbjct: 538 ADLIKPGHKIGKAKYLFSQIDPK 560


>gi|326474779|gb|EGD98788.1| methionyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326484274|gb|EGE08284.1| methionyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 650

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 226/518 (43%), Gaps = 53/518 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G      A
Sbjct: 13  KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + + 
Sbjct: 73  LEEGVTPEGLCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLEEK 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156
                +  + +++  D  V        Y  A G Q    QH                  P
Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           ++  + +  F  L   Q ++ ++  +  E    P   R    S++K GL+   ++R    
Sbjct: 193 IR-RKTKHIFLLLDKLQPEIENWATAAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           WG+ +P D   + ++YVW +A   Y + T    N      K+W  P ++ +   +GKD +
Sbjct: 251 WGVPVPLDGFERKVLYVWFEACIGYPSITA---NYTSEWEKWWRNPEEVQLYQFLGKDNV 307

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FHA+ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  
Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L++      D  ++        N +L   +GNLV+R V ++   K Y  +IP    F
Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIP---EF 424

Query: 384 TESD---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
           T S+    ++  V S + Q I E M+   +   +   + +    +    A K    L   
Sbjct: 425 TVSEPFYPALEEVTSLLRQYINE-MEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIAN 483

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            P+RA+ V+ + V +I   + +   ++P  +  I + L
Sbjct: 484 EPERAAAVVGIVVNLIHLCSSVFCPYLPTTSASILEQL 521


>gi|297837631|ref|XP_002886697.1| hypothetical protein ARALYDRAFT_315394 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332538|gb|EFH62956.1| hypothetical protein ARALYDRAFT_315394 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 713

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 214/498 (42%), Gaps = 54/498 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 16  KRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNTIYICGTDEYGTATETKA 75

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T K   D+       + D  DIS+D F RT+       C+ ++ K+ +   I + 
Sbjct: 76  LEENCTPKEICDK-YHAIHQVYDWFDISFDKFGRTSTPETK-VCQEIFNKLWENEWISED 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-------------NPVQWMEEEGYFFRL 169
                Y    + +  D  V K   G + +  H               ++     G + R 
Sbjct: 134 TMKQPYCDTCKKFLADRLVCKTTPG-FRDTDHLFLELPLLKYKLKKYIKETSSSGSWSR- 191

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP--QYI 227
           +A Q    S  E      +P +         K GLK   ++R    WG+ +P +   + +
Sbjct: 192 NAIQTTDASLKE------VPNDSE-------KDGLKKRCITRD-LKWGVPVPHEKYKEKV 237

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHAIYWPAFLLSA 282
            YVW DA   Y++ T    +      K+W  P ++ +   +GKD + FH + +P   L  
Sbjct: 238 FYVWFDAPIGYVSITSCYTS---EWEKWWKNPENVELYQFMGKDNVFFHTVLFPCTHLGT 294

Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDG 339
             +  + K V    ++ ++G K S+S G  +   +V +  + V+  RY+L+       D 
Sbjct: 295 GEDWTMMKTVSVTDYLNYEGGKFSESKGVGVFGNDVKDTNIPVEVWRYYLLTNRPEKSDT 354

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  D  +K++N +L   +GN V   +S I K  +      G +     S+     ++++
Sbjct: 355 TFKWDDFQKKLNHELLANLGNFVYLVLSFIAKPKNK-----GGYG----SLAEYAGKLVE 405

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  + M+   + + L   + L +E + Y      WEL K +    + V+     ++  LA
Sbjct: 406 DYVKVMEKVKLKKGLHTTMLLSNEGNTYLQDTNFWELYKKDKPSCAVVIRTAAGLVHLLA 465

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL+ F+P  + ++F  L
Sbjct: 466 RLLEPFMPSFSREVFKQL 483


>gi|302382698|ref|YP_003818521.1| methionyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193326|gb|ADL00898.1| methionyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 567

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 211/519 (40%), Gaps = 59/519 (11%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G +VL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVFARFKRGQGHEVLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+     +       +SYD F R++ + +    +   K +   G I +   
Sbjct: 63  AGQDVQTYCDEQHEIQKAAGQAFGLSYDWFGRSSREPNRRLTQHFAKVLEANGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQY----------------YNAQHNP--VQ 158
              YS+ D  +  D  V        + GA G                  Y+A      ++
Sbjct: 123 RMVYSVDDARFLPDRYVEGTCPHCGHVGARGDQCDNCGRLLDPTDLIAPYSAVSGSTNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +  +D++  + ES  ++      ++  +  +  GL D  ++R    WG+
Sbjct: 183 VRDTRHLYLLQTKIEDRIRGWIESKSDW--QTLAKSIALKHLDEGLIDRGITRD-LKWGV 239

Query: 219 KI--------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PAD----LH 261
            +        P     + YVW DA   Y+  T      +G+  + W      AD    + 
Sbjct: 240 PVVGDDGGPRPGMEGKVFYVWFDAPIEYIGATEEWAEANGTTWRDWWRLDEGADDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +GKD + FH + +PA +L +  P       K F+  ++   G K S S    +   + +
Sbjct: 300 FMGKDNVAFHTVSFPATILGSGEPWKTVDTLKAFN--WLNWYGGKFSTSQKRGVFMDQAL 357

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R+ L      G D  +  +  +   N DLA+ +GN V+R V      +DG++
Sbjct: 358 EILPADYWRWHLTAYGPEGSDAAFTWEQFQSTTNKDLADVLGNFVNRIVKFAESKFDGVV 417

Query: 378 P---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           P   TPG      E+ ++          E M+ +    AL  V  L +E   Y     PW
Sbjct: 418 PDGGTPGPLEAKLEADVAAGIAEATAAFEAMEFRKACVALRAVWVLGNE---YLQEAAPW 474

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              KT+ +R++  +   + ++   A L    +P  A  I
Sbjct: 475 TAYKTDVERSAVGVRTGLNLVALFARLAAPVLPFTAPTI 513


>gi|297520080|ref|ZP_06938466.1| methionyl-tRNA synthetase [Escherichia coli OP50]
          Length = 390

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     +   
Sbjct: 5   HFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHF 64

Query: 321 GVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             D+LRY+   +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++  
Sbjct: 65  DADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL-- 122

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A   +D  +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K 
Sbjct: 123 --ANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQ 180

Query: 440 NPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
               A    +  + + + R L   L+  +PKL  +
Sbjct: 181 EGRDADLQAICSMGINLFRVLMTYLKPVLPKLTER 215


>gi|291333221|gb|ADD92931.1| putative tRNA binding domain protein [uncultured archaeon
           MedDCM-OCT-S04-C14]
          Length = 723

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 132/570 (23%), Positives = 224/570 (39%), Gaps = 95/570 (16%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ----NSRNFRDMADVL 87
           D+  RF R  G  VL  +G+DEHG  I   A+  G+T +  VD+    N +   D+    
Sbjct: 4   DIQFRFERALGNRVLMVSGSDEHGTPITVTAETQGITPQQVVDEYHEINLKALLDLGCSW 63

Query: 88  DISYDD---------FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY--Y 136
             + D          F RTT+  H    +  ++ +   G   +     ++ L ++    +
Sbjct: 64  STTLDPRGPEFGGALFNRTTDSEHKRMVQENFQSLEKAGFFERKTTEQYFELNEDGSGRF 123

Query: 137 NDDEVYKG----------------ADGQYYNAQH--NPVQWM---------EEEGYFFRL 169
             D   +G                A G  Y A    NPV  M         E E  F+RL
Sbjct: 124 LPDRYVEGTCPSCEATDARGDQCDACGATYEAVELKNPVSKMNPSAKVVIRETEHLFYRL 183

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY--- 226
             +Q+ L  + + H E +  +  R     ++  GL   +++R    WGI +P        
Sbjct: 184 DLFQNALEEHAQ-HQEKVWKVNVREMTKQWLDMGLHPRAVTRD-LSWGIPVPLSGDSWDG 241

Query: 227 -IMYVWIDALTNYLTTTGYLDN------PDGSKA--KFW--------PADLHVIGKDILR 269
             +YVW +A+  Y T             PDG+    ++W        P  L+ +GKD + 
Sbjct: 242 KCVYVWFEAVQGYSTCARIWAQRQADALPDGADTWKRWWNVAEDGTKPRHLYFLGKDNIP 301

Query: 270 FHAIYWPAFLLSAN-------------LPLPKK------VFSHGFILHKGEKISKSLGNV 310
           FH I WPA +L  N             LP P +      V +  +++  G + SKS  + 
Sbjct: 302 FHTIIWPALILGLNHAHKGLSSTDPIALPGPGELALESDVPAMQYLMLAGGQFSKSRKHA 361

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-- 368
           +     +E    D+LRY+L   +    D  ++      ++N +L    GN V R +++  
Sbjct: 362 VWLPSFLERYHPDSLRYYLSIVMPEFSDSDFNWPDFVAKINTELNANYGNFVHRVLTLGA 421

Query: 369 ILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            L  ++   P  P       +S      R   +I  ++Q      AL Q++S+    ++ 
Sbjct: 422 RLPQHERKSPFEPHDGHACVQSHKDHVERAFNDITASLQRHRYKEALQQIMSVSQYGNQI 481

Query: 428 FDAQKPWE----LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             A  PW+     ++   D  +T+ +    + R LAI  Q F+P  A ++++ L    E 
Sbjct: 482 LQAAAPWKHLNGPQEGYEDSIATLAFCW-RISRFLAITTQPFMPTSAQQLWENLAQPSE- 539

Query: 484 RCFQSLDQRL---KPGFMLHKTFDPIFPRF 510
               + D+ +    P   L  T  P+F R 
Sbjct: 540 VSLSAWDEAINWQSPLTWLEDTPQPLFDRL 569


>gi|50557232|ref|XP_506024.1| YALI0F29843p [Yarrowia lipolytica]
 gi|49651894|emb|CAG78837.1| YALI0F29843p [Yarrowia lipolytica]
          Length = 750

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/510 (22%), Positives = 217/510 (42%), Gaps = 43/510 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+ +    + LF  GTDE+G      A
Sbjct: 193 QRNILITSALPYVNNVPHLGNIIGSVLSADVYSRYCKGRNYNALFICGTDEYGTATETKA 252

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               VT K   D+  +  +D+ D   I +D F RTT  +  +  + ++ K+ D G +   
Sbjct: 253 LEEKVTPKELCDKYHKIHKDVYDWFQIGFDYFGRTTTDKQTEIAQDIFMKLHDNGYLEAQ 312

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWM----------- 160
             +  Y  +  A+  D  V        Y+ A G   +      NP + +           
Sbjct: 313 KMTQLYCTQHNAFLADRFVEGICPKCGYEDARGDQCDGCGTLLNPFELIKPRCKLDGSSP 372

Query: 161 ---EEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
              + E  F  L   Q + + +  ES  +       R     ++ + L    ++R    W
Sbjct: 373 EVRDSEHIFLSLDKLQKETVEWAQESAEKGDWSKNSRTITDGWLNNELHPRCITRDLV-W 431

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGKDILR 269
           G  +P +     ++YVW DA   Y++ T    +P+  KA +W  P ++     +GKD + 
Sbjct: 432 GTPVPLEGFKNKVLYVWFDATIGYVSITANY-SPENWKA-WWNNPENVDLYQFMGKDNVP 489

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326
           FH + +PA LL    P  K   + +  ++ ++G K SKS G  V         +     R
Sbjct: 490 FHTVIFPATLLGTKQPWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAQDTGISPSVWR 549

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L+       D  +  D    R N++L   +GN V+R +      Y+G++         
Sbjct: 550 YYLLSARPESSDTQFSWDDFVARNNSELLANLGNFVNRVIKFSNAKYNGVVADFSTSELG 609

Query: 387 DESIL--SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443
           D   L  +    +L +    M+N  +  A    +++ S  +++  D +    L   +P +
Sbjct: 610 DTFTLLKADVDGLLTKYNTLMENTKLKSAQDTAMAISSRGNQFLQDNKLDNSLFADHPAK 669

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ V+ V + +I  ++ ++  F+P+ A  I
Sbjct: 670 SAAVVGVALNLIHLVSAVIAPFMPETAESI 699


>gi|166796169|gb|AAI59044.1| Unknown (protein for IMAGE:7540772) [Xenopus (Silurana) tropicalis]
          Length = 655

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 159/328 (48%), Gaps = 22/328 (6%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+++ GLK   ++R    WG  +P D     + YVW DA   Y++ T  Y D  +    K
Sbjct: 232 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----K 286

Query: 255 FWPAD-----LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307
           +W +       H + KD + FH++ +P+ LL A  N  L   + +  ++ ++  K SKS 
Sbjct: 287 WWKSTQQVQLYHFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSR 346

Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  V   +     +  D  R++L+     G+D  +    L  + N++L N +GN V+R+ 
Sbjct: 347 GVGVFGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAG 406

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             + K ++G +P     +E D+ +L+  +  LQ+  ++++   I  AL  ++++    ++
Sbjct: 407 MFVQKFFNGCVPEMELLSE-DKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQ 465

Query: 427 YFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y    +PW+  K N     RA TV  V V +   L+++L  ++P ++  I + L +  E+
Sbjct: 466 YIQVNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQES 525

Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRF 510
           +   +    RL+ G  +     P+F + 
Sbjct: 526 KVLTTDFCCRLQSGHQIGNV-SPLFQKL 552



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A 
Sbjct: 12  KNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATETKAM 71

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
             G+T +   D+ +     +    DIS+D F RTT  +H  T
Sbjct: 72  EEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTT-TQHQTT 112


>gi|146418697|ref|XP_001485314.1| hypothetical protein PGUG_03043 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 751

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 116/520 (22%), Positives = 221/520 (42%), Gaps = 44/520 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ A++ +    + LF  GTDE+G     
Sbjct: 188 KNERNILITSALPYVNNVPHLGNIVGSVLSADIYAKYVQNRNYNSLFICGTDEYGTATET 247

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+  +  +D+ D  DI++D F RTT  +  +  + ++ K+ + G + 
Sbjct: 248 KALEEKVTPQELCDKYHKVHKDVYDWFDINFDHFGRTTTPQQTEIAQDIFLKLYNNGYLE 307

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
           +      Y    +++  D  V        Y+ A G   +   N +   E           
Sbjct: 308 EKTTEQLYCEEHKSFLADRFVEGTCPKCGYEDARGDQCDKCGNLLDPFELINPRCKLDNA 367

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTF 214
                     + +L   Q +L  ++E         +   ++ S ++  GL+   ++R  F
Sbjct: 368 KPIPRNSTHIYLKLGDLQGELKEWFEKASTDGKWSKNAVQITSSWINRGLESRCITRDLF 427

Query: 215 DWGIKIPDDPQY--IMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGK 265
            WG  +P    +  ++YVW DA   Y++ T   + D       K+W    HV     +GK
Sbjct: 428 -WGTPVPLKNYHDKVLYVWFDATIGYVSITANYFKDKNTEDWLKWWKNPEHVDLYQFMGK 486

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322
           D + FH + +P+  +    N      + +  ++ ++G K SKS G  +      +E G+ 
Sbjct: 487 DNVPFHTVVFPSSQIGTRDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNA-KETGIT 545

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
               RY+L        D  +       R N++L   +GN V+R V   +  Y+G+IP   
Sbjct: 546 PSVWRYYLASIRPETSDAQFSWGEFVTRNNSELLANLGNFVNRLVKFTIAKYNGVIPDYK 605

Query: 382 AFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKT 439
                D ++     + +L    ENM+   I + L   +++ S  + +  D +    L   
Sbjct: 606 VSEIPDYAVFEKDVNELLSSYIENMEAVNIRKGLELAMAISSRGNLFLQDNKLDNTLYTK 665

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            P ++  V+ V + +I  ++ L+  F+P    ++ +IL V
Sbjct: 666 YPAKSDAVVGVGMNLIYLVSSLIYPFMPSTTAQMNEILNV 705


>gi|190346778|gb|EDK38945.2| hypothetical protein PGUG_03043 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 751

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 116/520 (22%), Positives = 221/520 (42%), Gaps = 44/520 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ A++ +    + LF  GTDE+G     
Sbjct: 188 KNERNILITSALPYVNNVPHLGNIVGSVLSADIYAKYVQNRNYNSLFICGTDEYGTATET 247

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+  +  +D+ D  DI++D F RTT  +  +  + ++ K+ + G + 
Sbjct: 248 KALEEKVTPQELCDKYHKVHKDVYDWFDINFDHFGRTTTPQQTEIAQDIFLKLYNNGYLE 307

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
           +      Y    +++  D  V        Y+ A G   +   N +   E           
Sbjct: 308 EKTTEQLYCEEHKSFLADRFVEGTCPKCGYEDARGDQCDKCGNLLDPFELINPRCKLDNA 367

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTF 214
                     + +L   Q +L  ++E         +   ++ S ++  GL+   ++R  F
Sbjct: 368 KPIPRNSTHIYLKLGDLQGELKEWFEKASTDGKWSKNAVQITSSWINRGLESRCITRDLF 427

Query: 215 DWGIKIPDDPQY--IMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGK 265
            WG  +P    +  ++YVW DA   Y++ T   + D       K+W    HV     +GK
Sbjct: 428 -WGTPVPLKNYHDKVLYVWFDATIGYVSITANYFKDKNTEDWLKWWKNPEHVDLYQFMGK 486

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV- 322
           D + FH + +P+  +    N      + +  ++ ++G K SKS G  +      +E G+ 
Sbjct: 487 DNVPFHTVVFPSSQIGTRDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNA-KETGIT 545

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
               RY+L        D  +       R N++L   +GN V+R V   +  Y+G+IP   
Sbjct: 546 PSVWRYYLASIRPETSDAQFSWGEFVTRNNSELLANLGNFVNRLVKFTIAKYNGVIPDYK 605

Query: 382 AFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKT 439
                D ++     + +L    ENM+   I + L   +++ S  + +  D +    L   
Sbjct: 606 VSEIPDYAVFEKDVNELLSSYIENMEAVNIRKGLELAMAISSRGNLFLQDNKLDNTLYTK 665

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            P ++  V+ V + +I  ++ L+  F+P    ++ +IL V
Sbjct: 666 YPAKSDAVVGVGMNLIYLVSSLIYPFMPSTTAQMNEILNV 705


>gi|116203381|ref|XP_001227502.1| hypothetical protein CHGG_09575 [Chaetomium globosum CBS 148.51]
 gi|88178093|gb|EAQ85561.1| hypothetical protein CHGG_09575 [Chaetomium globosum CBS 148.51]
          Length = 570

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 217/520 (41%), Gaps = 73/520 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFT---------------T 49
            + +++A+ Y N  PH+G+    ++ ADV AR+ R  G++ L+                +
Sbjct: 16  NVLVTSALPYVNNVPHLGNIIGSVLSADVFARYCRGRGINTLYVGGEQRPSFRQVRADLS 75

Query: 50  GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           GTDE+G      AQ    + +   D+       +    +IS+D F RTT ++H D    +
Sbjct: 76  GTDEYGTSTETRAQKEKCSPRELCDKFHAVHAQVYKWFNISFDVFGRTTTQQHTDITHHI 135

Query: 110 WKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQ 158
           + K+   G + +       C +    L D        + K  D +            P+ 
Sbjct: 136 FHKLEKHGFLEERPTPQPYCNTHGSFLADRLIEGQCPLCKFPDARGDQCDGCSQLLEPIN 195

Query: 159 WM--------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +              E    FF+L   Q ++ S   +  E   P   R+   +++K GL
Sbjct: 196 LVGPRCKLDGTMPVTHETRHVFFKLDKLQPQVESMLHN-VEKRWPTNARSATATWLKQGL 254

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-YLD-------NPDGSKAKFW 256
           K  +++R    WG+ +P   + + Y W DA   Y++ T  Y D       NPD    +F 
Sbjct: 255 KPFTITRD-IRWGVPVPGYDK-VFYSWFDACIGYVSITACYTDQWERWWRNPDVQLYQF- 311

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPI 314
                 IGKD + FH++ +PA  +       K   + +  F+ ++G K SKS G  +   
Sbjct: 312 ------IGKDNVVFHSVVFPATQIGTGDVWTKVHHLSTTDFLTYEGGKFSKSRGVGVFGD 365

Query: 315 EVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            V + +V  D  R++L+       D  +  +GL +  N  L NG+G  VSR + +++ +Y
Sbjct: 366 SVQQTDVPPDVWRFYLLSCRPETGDTEFRWEGLIEVNNNLLFNGVGGFVSRVLRLVVDEY 425

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             ++P        D   + V + +L    + M    +   L   +    E+ R  D    
Sbjct: 426 SSVVPR----WSEDYGFVKVTNDLLNRYIKEMDGVELRAGLLTAL----EISRCGDTLLS 477

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +L     +RAS V+ +TV ++  LA LL  ++P  A  I
Sbjct: 478 GDLHTQ--ERAS-VVGLTVNLVHLLASLLAPYMPDTAAAI 514


>gi|283945504|ref|NP_001017000.2| methionyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|195539926|gb|AAI67909.1| Unknown (protein for MGC:135671) [Xenopus (Silurana) tropicalis]
          Length = 905

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 159/328 (48%), Gaps = 22/328 (6%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+++ GLK   ++R    WG  +P D     + YVW DA   Y++ T  Y D  +    K
Sbjct: 482 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----K 536

Query: 255 FWPAD-----LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307
           +W +       H + KD + FH++ +P+ LL A  N  L   + +  ++ ++  K SKS 
Sbjct: 537 WWKSTQQVQLYHFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSR 596

Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  V   +     +  D  R++L+     G+D  +    L  + N++L N +GN V+R+ 
Sbjct: 597 GVGVFGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAG 656

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             + K ++G +P     +E D+ +L+  +  LQ+  ++++   I  AL  ++++    ++
Sbjct: 657 MFVQKFFNGCVPEMELLSE-DKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQ 715

Query: 427 YFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y    +PW+  K N     RA TV  V V +   L+++L  ++P ++  I + L +  E+
Sbjct: 716 YIQVNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQES 775

Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRF 510
           +   +    RL+ G  +     P+F + 
Sbjct: 776 KVLTTDFCCRLQSGHQI-GNVSPLFQKL 802



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)

Query: 3   EREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           E EK + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G     
Sbjct: 259 EGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATET 318

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
            A   G+T +   D+ +     +    DIS+D F RTT  +H  T
Sbjct: 319 KAMEEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTT-TQHQTT 362


>gi|159487881|ref|XP_001701951.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158281170|gb|EDP06926.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 796

 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 118/520 (22%), Positives = 226/520 (43%), Gaps = 48/520 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  + I++A+ Y N  PH+G+    ++ ADV AR+ R  G + ++  GTDE+G      A
Sbjct: 8   RRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRARGHNCIYVCGTDEYGTATETKA 67

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +   D+       +    DI++D F RT  +      + ++K +  +G + + 
Sbjct: 68  LEEGLTCQQICDKYHAIHAGIYQWFDIAFDRFGRTPTRAQTKIAQDIFKSLQSRGQLVQQ 127

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEE----GYFF 167
                YS     +  D  V        Y+ A G   +      NP + +  +    G   
Sbjct: 128 EMQQLYSEAAGKFLADRFVTGTCPKCGYEDARGDQCDGCGNLLNPTELIRPKCKLTGTTP 187

Query: 168 RLSAYQDKLLSYYESHP---EFILPIERR-----NEVI---SFVKSGLKDLSLSRKTFDW 216
            + + +   L   +  P   E+I     +     N V    ++++ GLK   ++R    W
Sbjct: 188 VMRSTRHVFLDLPQLSPQLQEYITTTSAQGGWSANCVTLTNAWMRDGLKLRCITRD-LKW 246

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKDILRFH 271
           G  +P +   + + YVW DA   Y++ T     PD       P D+ ++   GKD + FH
Sbjct: 247 GTPVPLEGFEEKVFYVWFDAPIGYISITANY-TPDWEAWWKSPKDVELVQFMGKDNVPFH 305

Query: 272 AIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE---VIEEVGVDALR 326
            + +PA LL    +  + + +    ++ ++G K SKS G      E   ++  + V    
Sbjct: 306 TVIFPATLLGTGGDWTMMRNISVTEYLNYEGGKFSKSRGTGEQEEEESRLLTTIIVPGTP 365

Query: 327 YFLVREIACGKDGFYDKDGLKKRV--NADLANGIGNLVS--RSVSMILKDYDGMIP--TP 380
             L +              L+  +  ++ L   + NL +  R++  + K +DG++P  T 
Sbjct: 366 LCLFQTPPRRTPRRPFTHVLRSTLPNSSQLFPTLPNLPTAPRALMFVSKFFDGVVPGATA 425

Query: 381 GAFTESDESILSVCSRVLQEIRE---NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               E++E   +V  +V   + E    M+   +   L  V+S+ ++ +++    KPW   
Sbjct: 426 AGQAEAEELGKTVGPKVRVPVDEYIAAMERIKLKEGLRLVMSISADGNKFLQDTKPWVAV 485

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K + D+ +T++  +V ++R L+ L+  ++P L+ KI   L
Sbjct: 486 KEDKDKCATLVATSVGLVRLLSALMAPYMPSLSAKILQQL 525


>gi|315057065|ref|XP_003177907.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339753|gb|EFQ98955.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 650

 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 116/515 (22%), Positives = 221/515 (42%), Gaps = 47/515 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G      A
Sbjct: 13  QRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT +    + ++  +++    +I +D F RT    H +  + ++K++ + G + + 
Sbjct: 73  LEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTTAHTEISQSIFKRLYEHGYLEEK 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------NP 156
                +  + +++  D  V        Y  A G Q    QH                  P
Sbjct: 133 TTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGATP 192

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+  + +  F  L   Q ++  +  +  E    P   R    S++K GL+   ++R    
Sbjct: 193 VR-RQTKHIFLLLDKLQPEIEKWSATAIEKGDWPKNSRVITGSWLKEGLQPRGITRD-LK 250

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           WG+ +P D   + ++YVW +A   Y + T    N      K+W  P D+ +   +GKD +
Sbjct: 251 WGVPVPLDGFEKKVLYVWFEACIGYPSITA---NYTPEWEKWWRNPEDVQLYQFLGKDNV 307

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FHA+ +P   L       +   + +  ++ ++G K SKS G  +      E  V  D  
Sbjct: 308 PFHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L++      D  ++        N +L   +GNLV+R V ++   K Y+ +IP     
Sbjct: 368 RYYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYNSVIPD-FTV 426

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
           TE     L   + +L++    M+   +   +   + +    +    A K    L    P+
Sbjct: 427 TEPFYPALEEVTGLLRQYINEMEGVHLRAGILTAMKIAEAGNGLIQANKLDNSLIANEPE 486

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           RA+ V+ + V +I   + +   ++P  +  I + L
Sbjct: 487 RAAAVVGIVVNLIHLCSSVFCPYLPATSASILEQL 521


>gi|156841046|ref|XP_001643899.1| hypothetical protein Kpol_1067p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114528|gb|EDO16041.1| hypothetical protein Kpol_1067p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 750

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 210/516 (40%), Gaps = 51/516 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G      A   
Sbjct: 196 ILITSALPYVNNVPHLGNIVGSVLSADIFSRYCKTRNYNTLFICGTDEYGTATETKALEE 255

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+       +     I +D F RTT ++  +  + ++ K++  G + +    
Sbjct: 256 GVTPRELCDKYHEIHAQVYKWFQIDFDYFGRTTTEKQTEIAQDIFLKLNKNGFLEEQSMK 315

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
             Y     ++  D  V        Y+ A G   +     +   E                
Sbjct: 316 QLYCPVHNSFLADRYVEGECPKCHYEDARGDQCDKCGGLLDAFELINPRCKLDNATPEPK 375

Query: 162 -EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +  F  L   +  +  +  ++  E       +    S++K GL    ++R    WG  
Sbjct: 376 FSDHIFLSLDKLEKNIADWVAKASDEGNWSKNSKTITQSWLKDGLHPRCITRDLV-WGTP 434

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIGKDILR 269
           +P D   + ++YVW DA   Y++ T         +  NPD  K          +GKD + 
Sbjct: 435 VPLDKYKEKVLYVWFDATIGYVSITANYTNEWQKWWKNPDNVKL------YQFMGKDNVP 488

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326
           FH + +P   +  +    +   + +  ++ ++G K SKS G  V         V     R
Sbjct: 489 FHTVIFPGSEIGTDDGWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAQDSGVSPSVWR 548

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
           Y+L        D  +  D    R N++L   +GN V+R +  +   Y+G++P   P    
Sbjct: 549 YYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRIIKFVNAKYNGVVPAYDPKKL- 607

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E+   + S   ++L      M+     R L   +SL +  +++    K    L   NPD+
Sbjct: 608 ENYGGLCSDIEKILNNYISEMEQAHERRGLELAMSLSARGNQFLQENKLDNTLFSQNPDK 667

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  V+ V + ++  +A ++  ++P+ +  I+ +L V
Sbjct: 668 SDAVVGVALNMVYTVASIIYPYMPETSEAIYRMLNV 703


>gi|322694565|gb|EFY86391.1| methionyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 643

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 226/523 (43%), Gaps = 69/523 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G      A
Sbjct: 13  KRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G T +   D+     +++ D  +I +D F RTT ++  +  + ++ K+ + G + + 
Sbjct: 73  LETGQTPQQLCDEFHVKHKEVYDWFEIGFDHFGRTTTQKQTEIVQDIFLKLHENGFLEER 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYN--------------------AQH 154
             +  Y  + + Y  D  V        Y  A G   +                    AQ 
Sbjct: 133 TTTQPYCEKHDGYLADRFVEGTCPKCGYDDARGDQCDKCGGLLDPFELINPRCKVDGAQP 192

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            P    + +  F +L   Q  +  ++E +H ++  P        S++  GL+  S++R  
Sbjct: 193 IP---RDTKHIFLKLDRLQSDIEKWFEEAHKKYGWPQNGVGITQSWLTKGLEGRSITRD- 248

Query: 214 FDWGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IG 264
             WG+ IP  P Y   ++YVW DA   Y + T  Y D  +    K+W    +V     +G
Sbjct: 249 LKWGVPIPL-PGYEKKVIYVWFDACIGYPSITANYTDEWE----KWWKNPDNVTLYQFMG 303

Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +P   +       +   + +  ++ ++  K SKS G  +   +V +++G+
Sbjct: 304 KDNVPFHTVIFPGSEIGTGYKWTMLNHLSTTEYLNYENGKFSKSRGVGVFGNQV-KDIGI 362

Query: 323 D--ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
                RY+L+       D  ++        N++L    GN V+R V  +    DG +P  
Sbjct: 363 SPSVWRYYLLSNRPESGDTQFEWQNFVLANNSELLANFGNFVNRIVKFVNAKCDGTVPEF 422

Query: 381 GAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
            A T +D++      IL V + +L E  + M+   I   + +++ + +E +        +
Sbjct: 423 SA-TYTDDTFDFAGWILRV-NALLSEYVDLMEKVHIRAGVKKLMEISTEGNTLLQ----Y 476

Query: 435 ELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            L  TN    P+R  TV+ + + +   LA L   ++P  +  I
Sbjct: 477 RLDNTNLVEKPERTKTVIGLALNLCHLLASLASPYMPSTSESI 519


>gi|312211904|emb|CBX91988.1| hypothetical protein [Leptosphaeria maculans]
          Length = 738

 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 220/524 (41%), Gaps = 63/524 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G      
Sbjct: 14  ERNVL-ITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATETK 72

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT K   D+      ++    +IS+D F RT  ++  D  + ++ K+   G + +
Sbjct: 73  AIEEKVTPKELCDKYYALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGYLEE 132

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH-----------------N 155
              +  Y    +++  D  V        Y+ A G Q     H                  
Sbjct: 133 QVTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGAT 192

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214
           PV   E +  +  L   Q  +  ++E   +         ++  S++K GL+   ++R   
Sbjct: 193 PVP-RETKHVYLGLDKLQPAVQKWFEEESKKGNWSSNGIQITASWLKEGLRPRGITRD-L 250

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTG-YLD-------NPDGSKAKFWPADLHVIG 264
            WG  +P +     +MYVW DA   Y++ T  Y D       NP+  K          +G
Sbjct: 251 KWGTAVPLEGYEDKVMYVWFDACIGYVSITATYTDEWQKWWHNPEQVKL------YQFMG 304

Query: 265 KDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +P   +    N  +   + +  ++ ++  K SKS  N+       +E G+
Sbjct: 305 KDNVPFHTVVFPCSQIGTKDNWTMLNTISTTEYLNYENGKFSKSR-NIGVFGNNAKETGI 363

Query: 323 --DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPT 379
             D  RY+L+       D  ++  G     N +L   +GN V+R +  +  K YD +IP 
Sbjct: 364 SSDVWRYYLLSHRPETGDTEFEWAGFIAANNNELLKNLGNFVNRVIKFVNSKIYDSVIPD 423

Query: 380 PGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKP 433
              F     TE  + +  +  R + E    +++  I  AL+  + L S  ++   D +  
Sbjct: 424 YTKFDDPYFTEHKKKVNDLLKRYISE----LEDVKIRAALSTALHLSSLGNQLLQDNKLD 479

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L    PDR + V+ + +  I  LA L+Q ++P     I   L
Sbjct: 480 NKLATEQPDRCAAVVGLALSHIHLLASLIQPYMPDTTTAILTQL 523


>gi|255723323|ref|XP_002546595.1| methionyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240130726|gb|EER30289.1| methionyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 748

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/517 (21%), Positives = 222/517 (42%), Gaps = 44/517 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G      
Sbjct: 185 DERNILITSALPYVNNVPHLGNIVGSVLSADIYSRYAKNRNYNALFVCGTDEYGTATETK 244

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+   G + +
Sbjct: 245 ALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFMKLHKNGYLEE 304

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM---------- 160
                 Y    +++  D  V        Y  A G   +   N   P++ +          
Sbjct: 305 KTTEQLYCEEHKSFLADRFVEGTCPKCEYDDARGDQCDKCGNLLDPLELIKPRCKLDGAS 364

Query: 161 ----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               E    + +L+  ++ L  +  +S  +       ++   S+ K GL+   ++R    
Sbjct: 365 PIVKESTHIYLKLNELEEPLKEWIIDSSAKGAWSKNSKSITDSWTKRGLEPRCITRDLI- 423

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFWPADLHV-----IGKD 266
           WG  +P     + ++YVW DA   Y++ T   + D       K+W    +V     +GKD
Sbjct: 424 WGTPVPLKGYEEKVLYVWFDATIGYISITANYFKDGNVDDYLKWWKNPENVDLYQFMGKD 483

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD- 323
            + FH + +PA  +    N      + +  ++ ++  K SKS G  +      +E GV  
Sbjct: 484 NVPFHTVVFPASQIGTGDNWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNA-KETGVSP 542

Query: 324 -ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N +L   +GN V+R V  ++  Y+G++P    
Sbjct: 543 SVWRYYLASNRPENQDSHFSWDEFVAKNNNELLANLGNYVNRIVKFLIAKYNGVVPKYDV 602

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTN 440
               D  S     + +L    ENM++  + + L   +++ S  +++  D +    L    
Sbjct: 603 SNIPDYASFEKDINTLLSSYIENMESVNLRKGLELAMAISSRGNQFLQDNKLDNSLYTNQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P+++  V+ V + ++  ++ ++  F+P+   +I +IL
Sbjct: 663 PNKSDAVVAVAINLVYLISAIIYPFMPETTKQINEIL 699


>gi|311978039|ref|YP_003987159.1| methionyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|82000411|sp|Q5UR82|SYM_MIMIV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55417250|gb|AAV50900.1| methyonyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204961|gb|ADO18762.1| methionyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 550

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 234/525 (44%), Gaps = 60/525 (11%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K ++++A+ YPN + PH+G+    +++ DV ARF R  G +V++  GTDE+G      A
Sbjct: 2   QKFFVTSALPYPNNSSPHLGNLVGALLSGDVYARFKRNQGHEVIYLCGTDEYGTTTMIRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT +   D+     + + D  +I +D F RT+  +  +    ++  + + G I + 
Sbjct: 62  RKEGVTCRELCDKYFELHKKVYDWFNIEFDVFGRTSTTKQTEITWEIFNGLYNNGYIEEK 121

Query: 123 CYSGWYSLRDEAYYNDDEV--YKGADGQYYNA------QHNPVQWMEEEGYFFR------ 168
                +  + + Y  D  +  Y   DG   N       Q    Q M +            
Sbjct: 122 TTVQAFCEKCDMYLADTYLKGYCYHDGCRENRVISNGDQCEICQKMIDVNKLINPFCSIC 181

Query: 169 ----LSAYQDKL-LSYYESHP---EFILPIERRNEVISFVKS----GLKDLSLSRKTFDW 216
               +    D L LS  +  P   +++  +E  + +++  K+    GL    ++R   +W
Sbjct: 182 LTPPIQKSTDHLYLSLDKLTPLVQQYLDRVEFDSRIMAISKAWLEIGLNPRCITRD-LEW 240

Query: 217 GIKIPD--DPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GK 265
           G  IP   DP+       + YVW DA   Y +    L N      ++  + +  +    K
Sbjct: 241 GTPIPINLDPKLEKYADKVFYVWFDAPIGYYSI---LANERDDWREWLNSGVTWVSTQAK 297

Query: 266 DILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVI--DPI-EVIEEV 320
           D + FH+I +PA ++ +N  LPL  ++    ++L++G+K SKS G  +  D + E+  ++
Sbjct: 298 DNVPFHSIVFPASVIGSNIELPLIDRICGTDYLLYEGQKFSKSQGVGLFGDKVAEISPKL 357

Query: 321 GV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           G+  D  R++L++     +D  ++ +   + V  DL N IGN ++R  S++ K       
Sbjct: 358 GINEDYWRFYLMKIRPETQDSSFNLEEFVRIVKTDLVNNIGNFINRVFSLLEK------- 410

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
           TP  + + +  I       +++   +M        L   + + S  +++  + KPW + K
Sbjct: 411 TP--YRDLNYQISPEYIEFIKKYEVSMDEFKFRDGLKICLEMSSRGNKFVQSTKPWTMIK 468

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              D    ++   V +   L  LL+  +PK A  +   L   ++N
Sbjct: 469 DGLD-TQEIMTEAVGICWILLNLLKPIIPKSACDMLSNLDTDNQN 512


>gi|170099107|ref|XP_001880772.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164644297|gb|EDR08547.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 718

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 218/538 (40%), Gaps = 65/538 (12%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHR--LDGLDVLFTTGTDEHGQK 57
           K+ EK + I++A+ Y N  PH+G+     + ADV +R++R        L+  GTDE+G  
Sbjct: 44  KQGEKNILITSALPYCNNVPHLGNIIGSTLSADVFSRYNRAWTRNRRTLYICGTDEYGTA 103

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
               A   G+T +   D+     ++  +  DI +D F RT+   H +  + ++  +   G
Sbjct: 104 TETQALKEGITPRELCDKYHVLHKETYEWFDIGFDHFGRTSTPLHTEIAQEIYTNLGKNG 163

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME-------- 161
            + K      Y      +  D  V        ++ A G   +     +  +E        
Sbjct: 164 VLEKQEKEQTYCEGCPKFLADRFVEGICPHCGFEDARGDQCDGCSRTLDAIELIKPRCLV 223

Query: 162 ----------EEGYFFRLSAYQDKLLSYYESH-------PEFILPIERRNEVI-SFVKSG 203
                         + +L A Q +   + +         P  +  I    E+I + +K+G
Sbjct: 224 DKTHVVTTKTSAHMYLKLDAIQPRTEEWIKKSWKAGKWSPNAV--INGDGEIIDARLKNG 281

Query: 204 LKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           L    L+R    WG+ +P + +        ++YVW DA   Y + T     P+  +  F 
Sbjct: 282 LMPTPLTRD-LKWGVPVPIEGEDTFGMAGKVLYVWFDAPIGYPSITANY-TPEWKQWWFN 339

Query: 257 PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NV 310
           P D+     +GKD + FH +YWP+  L       K   + +  ++ ++G K SKS    V
Sbjct: 340 PRDVDLYQFMGKDNVYFHTVYWPSVQLGDGRDWTKLHHLSTTEYLNYEGGKFSKSKNRGV 399

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
             P      +     RY+L+       D  +       R    +    GN V+R++  + 
Sbjct: 400 FGPAAKETGIPSSVWRYYLLSTRPETADAMFSWPECVSREGRSILRSFGNFVNRALKFVS 459

Query: 371 KDYDGMIP----TPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             YDG+IP     PG  + +D      +S+ + +L++  + M+   +   L Q+I L+S 
Sbjct: 460 SQYDGVIPESGDPPGPLSPNDPLDGEFISIVNNLLRDYIDAMEAVKLRLGL-QIIMLISN 518

Query: 424 VDRYFDAQKPWE--LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
               +         L   NP R + V+   V +I  L+ L+  F+P  ++ I   L V
Sbjct: 519 RGNTYLQSSGLNKALMAENPTRCAQVISRAVNLIYVLSSLIYPFMPATSDSIIAQLNV 576


>gi|70933656|ref|XP_738171.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56514164|emb|CAH82575.1| hypothetical protein PC300080.00.0 [Plasmodium chabaudi chabaudi]
          Length = 316

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 69/110 (62%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y++TAI Y N  PHIGHAYE+++AD +AR+HR  G D+ FTTG DEHG KIA  A
Sbjct: 206 KNDNFYVTTAINYVNGDPHIGHAYEIVLADTIARYHRNLGRDLFFTTGADEHGLKIANQA 265

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
               +T +   DQN   F+++   L  + D ++RTT + H +  + +W K
Sbjct: 266 ARNNMTPQELCDQNVIKFKNLNKNLHTTEDYYVRTTSETHKNIAQSIWTK 315


>gi|322710337|gb|EFZ01912.1| methionyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 644

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 226/523 (43%), Gaps = 69/523 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + +++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G      A
Sbjct: 13  KRNILVTSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G T +   D+     +++ D  +I +D F RTT ++  +  + ++ K+ + G + + 
Sbjct: 73  LETGQTPQQLCDEFHVKHKEVYDWFEIGFDHFGRTTTQKQTEIVQDIFLKLHENGFLEER 132

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYN--------------------AQH 154
             +  Y  + + Y  D  V        Y  A G   +                    AQ 
Sbjct: 133 TTTQPYCEKHDGYLADRFVEGTCPKCGYDDARGDQCDKCGGLLDPFELINPRCKVDGAQP 192

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            P    + +  F +L   Q  +  ++E +H ++  P        S++  GL+  S++R  
Sbjct: 193 IP---RDTKHIFLKLDMLQSDIEKWFEEAHKKYGWPQNGVGITQSWLTKGLEGRSITRD- 248

Query: 214 FDWGIKIPDDPQY---IMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IG 264
             WG+ IP  P Y   ++YVW DA   Y + T  Y D  +    K+W    +V     +G
Sbjct: 249 LKWGVPIPL-PGYEKKVIYVWFDACIGYPSITANYTDEWE----KWWKNPDNVTLYQFMG 303

Query: 265 KDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +P   +       +   + +  ++ ++  K SKS G  +   +V +++G+
Sbjct: 304 KDNVPFHTVIFPGSEIGTGYKWTMLNHLSTTEYLNYENGKFSKSRGVGVFGNQV-KDIGI 362

Query: 323 D--ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
                RY+L+       D  ++        N++L    GN V+R V  +    DG +P  
Sbjct: 363 SPSVWRYYLLSNRPESGDTQFEWQNFVLANNSELLANFGNFVNRIVKFVNAKCDGTVPEF 422

Query: 381 GAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
            A T +D++      IL + + +L E  + M+   I   + +++ + +E +        +
Sbjct: 423 SA-TYTDDTFDFAGWILRI-NALLSEYVDLMEKVHIRAGVKKLMEISTEGNMLLQ----Y 476

Query: 435 ELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            L  TN    P+R  TV+ + + +   LA L   ++P  +  I
Sbjct: 477 RLDNTNLVEKPERTKTVIGLALNLCHLLASLASPYMPSTSESI 519


>gi|126131760|ref|XP_001382405.1| methionyl tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126094230|gb|ABN64376.1| methionyl tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 757

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/514 (21%), Positives = 225/514 (43%), Gaps = 46/514 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + ++  GTDE+G      A   
Sbjct: 197 ILITSALPYVNNVPHLGNIIGSVLSADIYARYAKNRNYNAVYVCGTDEYGTATETKALEE 256

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT +   D+  +  +++ D  DI +D F RTT     +  + ++ ++     + +    
Sbjct: 257 KVTPQQLCDKYHKIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFTRLHKNNYLEERTTE 316

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWM-------------- 160
             Y    +++  D  V        Y+ A G   +   N   P+Q +              
Sbjct: 317 QLYCEEHKSFLADRFVEGTCPHCQYEDARGDQCDKCGNLLDPLQLIKPRCKVDGATPVVR 376

Query: 161 EEEGYFFRLSAYQDKLLSYYE---SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           E    + +L+  + +L  + +   SH E+      +    S++K GL+   ++R    WG
Sbjct: 377 ESTHIYLKLNELEGELAEWVDHASSHGEW--SKNAKTITASWIKRGLEPRCITRD-LSWG 433

Query: 218 IKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADL---HVIGKDIL 268
             +P +   + ++YVW DA   Y++ T  Y  + +G   + W   P ++     +GKD +
Sbjct: 434 TPVPLEGYEEKVLYVWFDATIGYVSITANYFKDHNGDDWRKWWKNPENVDLYQFMGKDNV 493

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325
            FH + +PA  +       K   + +  ++ ++  K SKS G  V         +     
Sbjct: 494 PFHTVVFPASQIGTRDVWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNSAKDTGIPASVW 553

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L        D  +  +    + N++L   +GN V+R V  ++  Y+G+IP       
Sbjct: 554 RYYLASVRPETSDSQFSWEEFVTKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDTKNV 613

Query: 386 SD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443
            D E   +  +++L+   + M+   + + L   +++ S  +++  D +    L    PD+
Sbjct: 614 PDYEKFETEVNQLLKSYVDTMEAVSLRKGLELAMAISSRGNQFLQDNKLDNSLYANLPDK 673

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+ V + ++  ++ ++  F+P+   +I +IL
Sbjct: 674 SDAVVGVALNLVYLVSAIIFPFMPETTKQINEIL 707


>gi|154288292|ref|XP_001544941.1| hypothetical protein HCAG_01988 [Ajellomyces capsulatus NAm1]
 gi|150408582|gb|EDN04123.1| hypothetical protein HCAG_01988 [Ajellomyces capsulatus NAm1]
          Length = 638

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 130/562 (23%), Positives = 242/562 (43%), Gaps = 66/562 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59
           K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   L+  GTDE+G    
Sbjct: 11  KGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162
            +      +  + +++  D  V        Y  A G Q     H        NP   ++ 
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +     DKL    E+  HP       P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265
             WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +GK
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380
           D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P  
Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSIVPD- 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
              TE    +L   + +L++    M+   +   +A  + +V   +    + K    L  +
Sbjct: 421 FTVTEPFTPVLGEITTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLIAS 480

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-------- 491
            P+RA++V+ + + +I  ++ +   ++P  +  I + L V   N    SLD+        
Sbjct: 481 EPERAASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFAN--IPSLDELKDEGWKP 538

Query: 492 -RLKPGFMLHKT---FDPIFPR 509
             +KPG  + K    F  I P+
Sbjct: 539 ALIKPGHQIGKAKYLFSQIDPK 560


>gi|239609857|gb|EEQ86844.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 636

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 128/562 (22%), Positives = 243/562 (43%), Gaps = 64/562 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV A + +  G   L+  GTDE+G     
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADVFASY-KACGRPTLYVCGTDEYGTTTET 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  R++ +  +I +D F RT   +H +  + ++K++ + G + 
Sbjct: 70  KALEEGVTPEELCAKYNKLHREVYEWFEIGFDVFGRTPTAQHTEISQEIFKRLYENGFLT 129

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      +  + +++  D  V        Y  A G   +   N +   E +    +L   
Sbjct: 130 EKTAEHPFCEKHDSFLADRYVEGECPRCAYNDARGDQCDKCGNLLDPFELKNPRCKLDGA 189

Query: 173 Q-------------DKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKTF 214
                         DKL    E+  HP       P   R    S++K GLKD  ++R   
Sbjct: 190 TPVLRNTRHIYLMLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRCITRDV- 248

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGKD 266
            WG+ +P +   + ++YVW +A   Y + T     PD    + W   P ++ +   +GKD
Sbjct: 249 KWGVPVPLEGYEKKVLYVWFEACIGYPSITANY-TPDW---ELWWRDPDNVQLYQFLGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322
            + FH++ +P   +       K   + +  ++ ++  K SKS G  +   +  +E GV  
Sbjct: 305 NVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFG-DNAQETGVPA 363

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380
           D  RY+L++      D  ++        N++L   +GNLV+R V ++   K Y+ ++P  
Sbjct: 364 DVWRYYLLKNRPETGDTQFEWRSFVDANNSELLAKLGNLVNRMVKLVASPKAYNSIVPD- 422

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
              TE  +  L   + +L++    M++  +   +   + +V   +    + K    L   
Sbjct: 423 FTVTEPFKPALEEITTLLRQYITEMESVHLRSGVGTAMKIVEAGNGLIQSNKLDNSLIAN 482

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--------- 490
            P+RA+ V+ + V +I  ++ +   ++P  +  I + L V   N    SLD         
Sbjct: 483 EPERAAAVVGIVVNLIYLISSIFSPYLPATSASILEQLNVPFTN--IPSLDDLKDEGWEP 540

Query: 491 QRLKPGFMLHKT---FDPIFPR 509
           + +KPG  + K    F  I P+
Sbjct: 541 ELIKPGHKIGKAKYLFSQIDPK 562


>gi|195335733|ref|XP_002034518.1| GM19865 [Drosophila sechellia]
 gi|194126488|gb|EDW48531.1| GM19865 [Drosophila sechellia]
          Length = 1022

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 230/528 (43%), Gaps = 77/528 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTT-----GTDEHGQKIAK 60
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + LF       GT    + +A+
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLFICGTDEYGTATENKALAE 315

Query: 61  AAQNAGVTTKVFVDQNS--------------RNFRDMADVLDISYDDFIRT----TEKRH 102
                 +  K F   N+                 ++  D++  ++ D ++     TE   
Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375

Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156
              C    R L  +  +    + GC  G+   R       D+  K   G+  NA     P
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425

Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206
              +       R S   D+L +   ++ P+    +++         +VI+  ++K GLK 
Sbjct: 426 RCKVCNTAPVLRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKP 482

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259
             ++R    WGI +P +   + + YVW DA   Y++ T           ++W PA     
Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +
Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +E G+  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K++
Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAVRNNSELLNNLGNFVNRALVFCEKNF 657

Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
              +P     T  DE + L++ +R L+    +M+   +   +  ++++    + Y  +Q+
Sbjct: 658 SSTVPE--VITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L K   D   RAST++ + V +   LA LL  ++P  A  +F  L
Sbjct: 716 PWNLLKGTDDQKKRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763


>gi|19074889|ref|NP_586395.1| METHIONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697495|sp|Q8SQW5|SYMC_ENCCU RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|19069614|emb|CAD25999.1| METHIONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 550

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/543 (21%), Positives = 223/543 (41%), Gaps = 53/543 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K +I++A+ Y N QPH+G+    +++ DV +R+ +  G   ++  GTDE+G  I   A +
Sbjct: 2   KKFITSALPYVNNQPHLGNIIGSVLSGDVYSRYCKKKGEVSVYICGTDEYGTAIEMEAIS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT     ++N +  + + D  +I +D F  T+   H    + L+ K+ D G   +   
Sbjct: 62  QGVTPLEICEKNRKLHKQVYDWFNIDFDYFGFTSSATHTGLVQDLFMKMYDNGHFSEVEI 121

Query: 125 SGWYS-----------LRDEAYYNDDEVYKG----ADGQYYNA-----------QHNPVQ 158
             +Y            +  E  +  D   +G    + G  YN+             +PV 
Sbjct: 122 EQFYCEHCGLFLADRFIVGECKFCGDGRARGDQCDSCGHTYNSLELLSPRCSICSSSPVV 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
                  FF L A++  L   Y ++   +     +N    ++        ++R   F+WG
Sbjct: 182 RATTH-LFFDLEAFRPSLEELYRTNGH-LWSQNAQNIFRQWISMEFYPRCMTRDLKFNWG 239

Query: 218 IKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKDILRFHA 272
           + +P +   + + YVW DA   YLT   +L    G     W  D  ++   GKD + FH 
Sbjct: 240 VPVPLEKFKEKVFYVWFDAPIGYLT---FLKELVGEDFGEWCKDAELVQFMGKDNVAFHT 296

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL--RYF 328
           + +PA L +     P+ +++ +  ++  + EK SKS  + I  ++++      +   RY+
Sbjct: 297 VIFPAMLYATGEKYPVVRRLSATEYLQFENEKFSKSRRHGIFGLDLVGGGLGKSCMWRYY 356

Query: 329 LVR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           L++      KD  +     ++ V ADL N +GN V+R +  I    +  +         D
Sbjct: 357 LLKIRPESTKDSNFTFSDFRQSVTADLINNLGNFVNRVLKYIQSKCNSRVSLL-ELDSGD 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  +   + +  + +  M+   +  AL  V+ +    + Y            + DR    
Sbjct: 416 KKCIEDVNELYCKYKAKMEEIKLREALQVVMEICRRGNEYIQE------GVRSRDRKGHF 469

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             +   +I  +  LL  F+P  +    +IL + +          R+  G  +     P+F
Sbjct: 470 FCLGFSIIGLVGTLLHPFIPVTS---LEILRMCNLEETMFPESMRIVDGHTMGSDIRPLF 526

Query: 508 PRF 510
             F
Sbjct: 527 EDF 529


>gi|39973615|ref|XP_368198.1| hypothetical protein MGG_01046 [Magnaporthe oryzae 70-15]
 gi|145018000|gb|EDK02279.1| hypothetical protein MGG_01046 [Magnaporthe oryzae 70-15]
          Length = 700

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 128/548 (23%), Positives = 222/548 (40%), Gaps = 74/548 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +E + +++A+ Y N  PH+G+    ++ ADV AR+ R  GL  L+  G+DE+G      A
Sbjct: 14  QENILVTSALPYVNNVPHLGNIIGSVLSADVFARYCRAKGLQTLYVCGSDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV       +     +++ D   I +D F RT    H    + ++ K+   G I + 
Sbjct: 74  LEEGVDPATLCAKYHAVHKEIYDWFRIEFDVFGRTPTPEHTQIVQDIFSKLWKNGFIEQQ 133

Query: 123 CYSGWYSLRDE--AYYNDDEV--------YKGADGQYYNAQHNPVQWMEEE--------- 163
                +  R E   +  D  V        Y GA G   +A  N +  ME +         
Sbjct: 134 ETVQAFCARPEHNTFLADRFVEGECSLCHYTGARGDQCDACGNLLDPMEPDKDSSAPAED 193

Query: 164 ------GY---------------------FFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
                 G+                     F RL A +D+++S+ +   E        +  
Sbjct: 194 DAQKATGWLINPKCKVDGSTPEKRRTRHLFLRLDALKDEIVSWLK-ETETGWSSNCVSIT 252

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLTTTGYL-- 245
            S++  GLK   +SR    WG+ IP      D+ +Y   + YVW DA   Y + T     
Sbjct: 253 HSWIDKGLKPRGISRD-LKWGVPIPKGLDGLDEEEYARKVFYVWFDACIGYPSITKTYTD 311

Query: 246 -DNPDGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFI 296
            DN DG+  + W   P ++ +   +GKD + FH I +PA  L    P  K   + +  ++
Sbjct: 312 KDNLDGNNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTRQPWTKVNHLSTTEYL 371

Query: 297 LHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            ++G K SKS G  V         +  D  RY+L+       D  +  +      N DL 
Sbjct: 372 NYEGGKFSKSKGVGVFGNTAQSTGIDPDVWRYYLLSRRPESSDSEFKWEEFIDANNNDLL 431

Query: 356 NGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             +GNLV R V          +P          D+    V +++LQ+   N++   +   
Sbjct: 432 KNLGNLVQRVVKFAHAKMGAKVPEYAKKEVPTFDQHKAEV-NKLLQDYISNLKATKLRAG 490

Query: 414 LAQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           LA  + + +  ++     K   +L   +P+  + ++ + ++ +  +A LL  ++P  A  
Sbjct: 491 LATTMLISALGNKLLQDHKLGNQLLDEDPELCNGLIALALDHLYLIASLLFPYMPGTARS 550

Query: 473 IFDILFVA 480
           I   + +A
Sbjct: 551 ILRQIGLA 558


>gi|308125798|ref|ZP_07663527.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308113929|gb|EFO51469.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 330

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 35/306 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 12  KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 71

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S
Sbjct: 72  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131

Query: 126 GWYSLRDEAYYND-------------DEVYKGAD--GQYYNAQH--NPVQWM-------- 160
             +    E +  D             D+     D  G+ Y+     NP   +        
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEI 248

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +     YVW+DA   Y+ +   L N   D    ++W  D      H IGKDI+ FH++
Sbjct: 249 PGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSL 308

Query: 274 YWPAFL 279
           +WPA L
Sbjct: 309 FWPAML 314


>gi|241153667|ref|XP_002407128.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215494043|gb|EEC03684.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 649

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 225/516 (43%), Gaps = 52/516 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G     
Sbjct: 4   KGERNVLITSALPYVNNVPHLGNIVGSVLSADVFARYCRLRNWNTLYVCGTDEYGTATET 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +   D+ ++   D+    +IS+D F RTT ++     + ++ K+     + 
Sbjct: 64  KALEMGITPREICDRFNKLHADIYKWFNISFDHFGRTTTEQQTKIAQDIFLKLHKNQYMR 123

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWMEEEGYFFR- 168
           +      +  R E +  D  V        Y+ A G   +      NP +  +      + 
Sbjct: 124 EEVVEQLFCNRCERFLADRFVEGTCPFCAYEDARGDQCDLCSKLINPTELKQARCKLCKE 183

Query: 169 ---LSAYQDKLLSYYESHPEFILPIERRNE---------VIS--FVKSGLKDLSLSRKTF 214
              L   +   L   +  P F     ++ E         VI+  +V+ GLK   ++R   
Sbjct: 184 PPVLKTSRHLFLDLPKLEPAFGEWYRKKTEGDEWTQTAKVITHAWVRDGLKPRCITRD-L 242

Query: 215 DWGIKIPDDPQYIMYVWIDALTNY---LTTTGY----LDNPDGSKAKFWPADL----HVI 263
            WG  +P      ++ + D +T+Y   LT   +    LD    ++      D       +
Sbjct: 243 KWGTPVP------LHDYKDKVTSYAAFLTWAKFPQINLDVEKSAQVFQHKQDFVTLYQFM 296

Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320
            KD + FH I +P   L  +        + +  ++ ++  K SKS G  V         +
Sbjct: 297 AKDNVPFHGIVFPMTQLGTHEHYTTVDHLVAVEYLNYEDSKFSKSRGIGVFGNDAQDTGI 356

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+ +    +D  +  + L  + N++L N +GN ++R+++ +  ++ G++P  
Sbjct: 357 PADVWRFYLMYQRPEHQDTSFCWNDLLMKNNSELLNNLGNFINRALTFLSNNFGGIVPE- 415

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               E D+ +++  + +++     M    +  ++  ++S+    ++Y    KPWEL K  
Sbjct: 416 LQLLEEDKVVIAKVASLVEHYVSLMDKVRLRDSIRCILSVSKVGNQYIQFNKPWELVKGT 475

Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           P    R++TV+ ++  +   L+ LLQ F+P+ +  +
Sbjct: 476 PAQKLRSATVIGLSANIACLLSGLLQPFMPETSEAL 511


>gi|303391413|ref|XP_003073936.1| methionyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303303085|gb|ADM12576.1| methionyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 543

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 125/544 (22%), Positives = 229/544 (42%), Gaps = 55/544 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K +I++A+ Y N QPH+G+    +++ DV +++ +  G   L+  GTDE+G  I   A +
Sbjct: 2   KKFITSALPYVNNQPHLGNVIGSVLSGDVYSKYCKKKGETCLYICGTDEYGTAIEMEAVS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG------- 117
            G       ++N R  + + D  +I +D F  T+   H +  + L+ K+ + G       
Sbjct: 62  QGRPPLEICEENRRLHKQVYDWFNIDFDYFGFTSTPEHTEMVQSLFMKMYNNGHFKELEI 121

Query: 118 -DIYKGCYSGWYSLR---DEAYYNDDEVYKG----ADGQYYN---------AQHNPVQWM 160
              Y G    + + R    E  +  D   KG    A GQ YN         +  + V  +
Sbjct: 122 EQFYCGNCGIFLADRYVVGECKFCGDLGAKGDQCDACGQTYNFLELLSPKCSICSTVPII 181

Query: 161 EEEGY-FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGI 218
               + FF L  ++  LL  Y+ +   +     +N    ++        ++R   F WG+
Sbjct: 182 RSTCHLFFDLEMFRPHLLETYKENGH-LWSQNAQNIFNQWISMEFHPRCMTRDLKFRWGV 240

Query: 219 KIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAI 273
            +P +   + + YVW DA   YLT    L   D S+   W  D   +  +GKD + FH I
Sbjct: 241 PVPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFSE---WCKDSELVQFMGKDNVAFHTI 297

Query: 274 YWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL-RYFL 329
            +PA + +     P+ K++ +  ++  + +K SKS  + I  +++++  +G   + RY+L
Sbjct: 298 IFPAMIYATGEKYPIIKRLSATEYLQFENQKFSKSRRHGIFGLDLVKGNLGKPCIWRYYL 357

Query: 330 VR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           ++      KD  +     ++ V ADL N +GN V+R +  I    +  +       E D+
Sbjct: 358 MKIRPESTKDSNFTFYDFQQSVTADLINNLGNFVNRVLKYIESRCNSRVSLL-ELDEKDK 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             +   + + +     M    +   L  V+ +    + Y            N  R S   
Sbjct: 417 EFVEDINGLYRRYITKMDEIKLREGLQVVMEISRRGNEYIQE------GVRNKARKSHFF 470

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLHKTFDPI 506
            +   V+  LA LL  F+P  + +I  +  + +       Q +D     G M+     P+
Sbjct: 471 CLGFSVVGFLATLLYPFMPVASVEILRMCNLEETGLPESIQIID-----GHMIGGRICPL 525

Query: 507 FPRF 510
           F  F
Sbjct: 526 FENF 529


>gi|218513078|ref|ZP_03509918.1| methionyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 80

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/77 (55%), Positives = 57/77 (74%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 4  MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 63

Query: 61 AAQNAGVTTKVFVDQNS 77
           A+  G+T +   D+NS
Sbjct: 64 TARAEGITAQALADRNS 80


>gi|254581556|ref|XP_002496763.1| ZYRO0D07568p [Zygosaccharomyces rouxii]
 gi|238939655|emb|CAR27830.1| ZYRO0D07568p [Zygosaccharomyces rouxii]
          Length = 751

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 215/520 (41%), Gaps = 53/520 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  + + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G     
Sbjct: 192 KGEKNIIITSALPYVNNVPHLGNIVGSVLSADIFARYCKARNYNTLFICGTDEYGTATET 251

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT      +  +  +++ D   + +D F RTT     +  + ++ K++D G + 
Sbjct: 252 KALEEKVTPLELCTKYHKIHKEVYDWFQVGFDYFGRTTTPLQTEIAQDIFSKLNDNGFLE 311

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME----------- 161
           +      Y     ++  D  V        Y+ A G   +     +   E           
Sbjct: 312 EQTMKQLYCPVHNSFLADRFVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDNA 371

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTF 214
                  +  F  L   + ++  +     E     +    +  S++K GL+   ++R   
Sbjct: 372 EPEVKYSDHIFLSLDKLEGRVADWVNKKSEEGFWSKNSKTITQSWLKDGLRPRCITRDLI 431

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDI 267
            WG  +P +     ++YVW DA   YL+ T    N      K+W  P D+++   +GKD 
Sbjct: 432 -WGTPVPLEKYKDKVLYVWFDATIGYLSITA---NYTKHWQKWWKNPEDVNLYQFMGKDN 487

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH + +PA  +       +   + +  ++ ++G K SKS    V         V    
Sbjct: 488 VPFHTVIFPASQIGTGDQWTMLHHLNTTEYLQYEGGKFSKSRNIGVFGNNAKDSGVSPSV 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------ 378
            RY+L        D  +  D    + N++L   +GN V+R V  +   Y+G++P      
Sbjct: 548 WRYYLTSVRPESSDSHFSWDDFVTKNNSELLANLGNFVNRLVKFVNAKYNGVVPDYDVKN 607

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437
            PG      +S+ S  S++L      M+     R L   +SL +  +++    +    L 
Sbjct: 608 LPGF-----DSLKSDISQILGSYIAEMEPAHERRGLELAMSLSARGNQFLQENRLDNNLF 662

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              P ++  V+ V + ++  +A ++  F+P+ A KI+ +L
Sbjct: 663 SNFPAKSDAVVGVGLNIVYAVASVIGPFLPEAAEKIYRML 702


>gi|147898905|ref|NP_001086723.1| methionyl-tRNA synthetase [Xenopus laevis]
 gi|50603650|gb|AAH77353.1| Mars-prov protein [Xenopus laevis]
          Length = 905

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 162/329 (49%), Gaps = 24/329 (7%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+++ GLK   ++R    WG  +P D     + YVW DA   Y++ T  Y D  +     
Sbjct: 482 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWE----M 536

Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307
           +W +   V     + KD + FH++ +P+ LL A  N  L   + +  ++ ++  K SKS 
Sbjct: 537 WWKSPQQVQLYNFMAKDNVPFHSVIFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSR 596

Query: 308 GNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           G  +   ++ +E G+  D  R++L+     G+D  +    L  + N++L N +GN V+R+
Sbjct: 597 GVGVFG-DMAQETGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRA 655

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              + K ++G +P     +E D+ +L+  +  LQ+  + ++   I  AL  ++++    +
Sbjct: 656 AMFVQKFFNGCVPEMELLSE-DKRLLAQVAAELQQFNQLLEKVRIRDALRCILNISRHGN 714

Query: 426 RYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +Y    +PW+  K N +   RA TV  V V +   L+++L  ++P ++  I + L +  E
Sbjct: 715 QYIQVNEPWKCIKGNQEEQKRAGTVTGVAVNMAALLSVMLHPYMPTISGVIQEQLLMPQE 774

Query: 483 NRCFQS-LDQRLKPGFMLHKTFDPIFPRF 510
           ++   +    RL+ G  +     P+F + 
Sbjct: 775 SKVLTTDFCCRLQSGHRIGNV-SPLFQKL 802



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 3   EREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           E EK + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G     
Sbjct: 259 EGEKNILITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATET 318

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            A   G+T +   D+ +     +    +IS+D F R
Sbjct: 319 KAMEEGLTPQQICDKYNAVHTAIYQWFNISFDYFGR 354


>gi|195487299|ref|XP_002091851.1| GE13875 [Drosophila yakuba]
 gi|194177952|gb|EDW91563.1| GE13875 [Drosophila yakuba]
          Length = 1021

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 230/528 (43%), Gaps = 77/528 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTT-----GTDEHGQKIAK 60
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L        GT    + +A+
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 61  AAQNAGVTTKVFVDQNS--------------RNFRDMADVLDISYDDFIRT----TEKRH 102
                 +  K F   N+                 ++  D++  ++ D ++     TE   
Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375

Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156
              C    R L  +  +    + GC  G+   R       D+  K   G+  NA     P
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425

Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206
              +       R S   D+L +   ++ P+    +++         +VI+  ++K GLK 
Sbjct: 426 RCKVCNSAPVLRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKP 482

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259
             ++R    WGI +P +   + + YVW DA   Y++ T           ++W PA     
Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +
Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +E G+  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K++
Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657

Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +  IP     T  DE + L++ +R L+    +M+   +   +  ++++    + Y  +Q+
Sbjct: 658 NSTIPE--VITTQDELVLLALINRELRGYINSMEKAKLRDGIRHLLAISRHGNGYMQSQQ 715

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L K   D   RAST++ + V +   LA LL  ++P  A  +F  L
Sbjct: 716 PWVLLKGTDDQKKRASTIIGLCVNIACLLANLLFPYMPSTARTLFGQL 763


>gi|58266864|ref|XP_570588.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110666|ref|XP_776160.1| hypothetical protein CNBD2070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258828|gb|EAL21513.1| hypothetical protein CNBD2070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226821|gb|AAW43281.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 724

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 214/543 (39%), Gaps = 80/543 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+     + ADV AR++R   +  L+  GTDE+G      A
Sbjct: 30  QRNVLITSALPYVNNVPHLGNIIGSTLSADVFARYNRTLNVPTLYICGTDEYGTATETKA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT      +  +   ++ +   IS+D + RT+   H +  + +++++ D G     
Sbjct: 90  LEEGVTPYELCTKFHKLHTEIYEWFQISFDKWGRTSSPEHTEITQGIYRRLHDNGLFRLE 149

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH----NPVQWMEEEG------ 164
                Y + D+ +  D  V        Y  A G   +       +P Q +          
Sbjct: 150 TTDQTYCVDDKLFLADRFVEGICPNCGYDDARGDQCDKCSLTFSSPTQLLNPRCKRNKAH 209

Query: 165 ---------YFFRLSAYQDKLLSYYESHP-----EFILPIERRNEVIS--FVKSGLKDLS 208
                      +RL   Q +L+ + +             I  + E++    +  GL+  +
Sbjct: 210 TLSVRPSTHACYRLDLLQPRLVEWMQKARVKGKWGTNAVITEKGEIVEPRMLGEGLRPSA 269

Query: 209 LSRKTFDWGIKIP---DDPQ------YIMYVWIDALTNYLTTTG--------YLDNPDGS 251
           ++R    WG+++P   D+ +       ++YVW DA   Y + T         +  NPD  
Sbjct: 270 VTRD-LKWGVEVPKVGDEEEDKAMEGKVIYVWFDAPIGYPSITATYTEEWEKWWKNPDNV 328

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS--- 306
           +          +GKD + FH + +PA LL       +   + S  ++ ++  K SKS   
Sbjct: 329 EL------YQFMGKDNVYFHTVLFPAMLLGTEERWTMLHNISSTQYLNYEDTKFSKSRNV 382

Query: 307 --LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
              GN         E+     RY+L+ +     D  +         N +L   +GN V+R
Sbjct: 383 GVFGNNARETGQPPEI----WRYYLISQRPENSDSSFLWSKFIAANNNELLANLGNFVNR 438

Query: 365 SVSMILKDYDGMIPTPGAFTES---------DESILSVCSRVLQEIRENMQNQLIHRALA 415
            V  I    D  +P P  F            D   ++  +  L+E RE M +  +   LA
Sbjct: 439 VVKFINAKLDSKVPGPEDFAGGEVAPPADSLDVDFVTDVNTRLKEYREQMDDTKLRGGLA 498

Query: 416 QVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             ++L +  ++Y         L  +NP R + VL   V +I  L+++   F+P  +  I 
Sbjct: 499 TAMALSARGNQYLQENSLDNALLASNPKRCAEVLLNAVNLIYVLSVVFHPFMPNTSEGIL 558

Query: 475 DIL 477
             L
Sbjct: 559 RQL 561


>gi|325095468|gb|EGC48778.1| methionyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 637

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 243/564 (43%), Gaps = 70/564 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59
           K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   L+  GTDE+G    
Sbjct: 11  KGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162
            +      +  + +++  D  V        Y  A G Q     H        NP   ++ 
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +     DKL    E+  HP       P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265
             WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +GK
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380
           D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y   +P  
Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPD- 420

Query: 381 GAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437
             FT  E  + +L   + +L++    M+   +   +A  + +V   +    + K    L 
Sbjct: 421 --FTVPEPFKPVLGEVTTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLI 478

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------ 491
            + P+RA++V+ + + +I  ++ +   ++P  +  I + L V   N    SLD+      
Sbjct: 479 ASEPERAASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFAN--IPSLDELKDEGW 536

Query: 492 ---RLKPGFMLHKT---FDPIFPR 509
               +KPG  + K    F  I P+
Sbjct: 537 KPALIKPGHQIGKAKYLFSQIDPK 560


>gi|225557737|gb|EEH06022.1| methionyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 638

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 243/564 (43%), Gaps = 70/564 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59
           K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   L+  GTDE+G    
Sbjct: 11  KGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162
            +      +  + +++  D  V        Y  A G Q     H        NP   ++ 
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +     DKL    E+  HP       P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265
             WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +GK
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380
           D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y   +P  
Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPD- 420

Query: 381 GAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437
             FT  E  + +L   + +L++    M+   +   +A  + +V   +    + K    L 
Sbjct: 421 --FTVPEPFKPVLGEITTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLI 478

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------ 491
            + P+RA++V+ + + +I  ++ +   ++P  +  I + L V   N    SLD+      
Sbjct: 479 ASEPERAASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFAN--IPSLDELKDGGW 536

Query: 492 ---RLKPGFMLHKT---FDPIFPR 509
               +KPG  + K    F  I P+
Sbjct: 537 KPALIKPGHQIGKAKYLFSQIDPK 560


>gi|295674507|ref|XP_002797799.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226280449|gb|EEH36015.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 653

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 237/539 (43%), Gaps = 54/539 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKI 58
           +K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   LF  GTDE+G   
Sbjct: 10  VKGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLFVCGTDEYGTAT 65

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ + G 
Sbjct: 66  ETKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQSIFKRLHENGF 125

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME 161
           + +      +  + +++  D  V        Y  A G Q     H        NP   ++
Sbjct: 126 LEEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLD 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILP-IERRN-----EVI--SFVKSGLKDLSLSRK 212
                 R + +   LL   +    E++ P IE+ N      VI  S++K GLKD  ++R 
Sbjct: 186 GATPVRRPTKHIHILLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD 245

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IG 264
              WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +G
Sbjct: 246 -LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLG 300

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH++ +P   +       K   + +  ++ ++  K SKS G  V         + 
Sbjct: 301 KDNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P 
Sbjct: 361 PDVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438
               TE  +  L   + +L++    M++  +   L   + +V   +    A K    L  
Sbjct: 421 -FTVTEPFKPALEEITALLRQYISEMESVHLRAGLVTAMKIVEVGNGLIQANKLDNSLIA 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             P+RA++V+ + V +I  ++ +   ++P  +  I   L V   N    SLD+  + G+
Sbjct: 480 NEPERAASVVGIVVNLIYLISSIFSPYLPATSASILAQLNVPFRN--IPSLDELKEGGW 536


>gi|169859193|ref|XP_001836237.1| methionyl tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116502714|gb|EAU85609.1| methionyl tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 718

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 120/547 (21%), Positives = 217/547 (39%), Gaps = 79/547 (14%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K+ EK + I++A+ Y N  PH+G+     + ADV +R+ R      L+  GTDE+G    
Sbjct: 26  KDGEKNILITSALPYCNNVPHLGNIIGSTLSADVFSRYSRTRNQRTLYVCGTDEYGTATE 85

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+     +   +  DI +D F RT+   H D  + ++  +   G +
Sbjct: 86  TQALKEGITPRELCDKYYVLHKATYEWFDIGFDHFGRTSTPYHTDISQEIFLNLGKNGFL 145

Query: 120 ------------------YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ 153
                             Y  CY  + ++  + +  D  V        Y+ A G   +  
Sbjct: 146 EKQEKEQVYCEGCPKYVYYTSCYGSFANVALDRFLADRYVEGVCPHCGYEDARGDQCDGC 205

Query: 154 HNPVQWME------------------EEGYFFRLSAYQDKLLSYYESH-------PEFIL 188
              +  +E                      + +L+  Q K   + +S        P  + 
Sbjct: 206 SRTLDAVELIKPRCLVDKTHKVTTKLSSHMYLKLNEIQPKTEEWIKSSWKKGKWSPNAV- 264

Query: 189 PIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLT 240
            I    E+I + +K GL    L+R    WG+ +P + +        ++YVW DA   Y +
Sbjct: 265 -INGDGEIIDARLKMGLLPTPLTRD-LKWGVPVPIEGEDVHGMKDKVLYVWFDAPIGYPS 322

Query: 241 TTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGF 295
            T  L  P+  +    P ++     +GKD + FH +YWP+  +       K   + +  +
Sbjct: 323 ITANL-TPEWKQWWLNPENVDLYQFMGKDNVYFHTVYWPSVQIGDGRNWTKLHHLSTTEY 381

Query: 296 ILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + ++G K SKS    V  P      +     RY+L+       D  +         N  L
Sbjct: 382 LNYEGGKFSKSKNRGVFGPAAKDTGIPASVWRYYLLSTRPETADAMFSWSDCVAANNNVL 441

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDE---SILSVCSRVLQEIRENMQN 407
            N  GN V+R++  I   Y G+IP     PG ++ +DE      +  + +L++  + M  
Sbjct: 442 LNNFGNFVNRALKFISSQYGGVIPDSEDAPGPYSPNDEVDGEFFTHVNSLLKDYIDAMDA 501

Query: 408 QLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +   L  V+ + ++ + Y  +      L  + P R + V+     +I  L++L+  F+
Sbjct: 502 VKLRLGLQTVMLISAQGNNYLQSSGLNKALMTSKPKRCAQVVSRAANLIYLLSVLIHPFM 561

Query: 467 PKLANKI 473
           P     I
Sbjct: 562 PATGAAI 568


>gi|297605899|ref|NP_001057729.2| Os06g0508700 [Oryza sativa Japonica Group]
 gi|255677088|dbj|BAF19643.2| Os06g0508700 [Oryza sativa Japonica Group]
          Length = 727

 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 56/436 (12%)

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV----- 141
            DI +D F RT+  +  + C+ +++K+ +   + +      Y    + +  D  V     
Sbjct: 25  FDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTENTMQQLYCDTCQRFLADRLVEGKCP 84

Query: 142 -----YKGADG-QYYNAQH--NPVQWMEEEG--------------YFFRLSAYQDKLLSY 179
                Y+ A G Q  N     NP + ++ +                F  L    DKL++Y
Sbjct: 85  TEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKNTPRVRDTDHLFLELPLLSDKLVNY 144

Query: 180 Y-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALT 236
             E+    +          +++K GLK   ++R    WG+ +P +     + YVW DA  
Sbjct: 145 INETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-LKWGVPVPHEKYKDKVFYVWFDAPI 203

Query: 237 NYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDILRFHAIYWPAFLLSAN--LPLPKK 289
            Y++ T     PD  K  +W  P ++ +   +GKD + FH + +P+ LL       + K 
Sbjct: 204 GYVSITASY-TPDWEK--WWKDPDNVELFQFMGKDNVPFHTVMFPSTLLGTGEKWTMMKT 260

Query: 290 VFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           +    ++ ++  K SKS      GN      +  EV     RY+L+       D  +   
Sbjct: 261 ISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEV----WRYYLLTNRPEVSDTLFTWA 316

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPGAFTES-DESILSVCSRVL 398
            L+ ++N++L N +GN ++R +S + K     YD ++P  P A +    ++++   ++ +
Sbjct: 317 DLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPNAESHPLTKALVEKTNKWV 376

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++  E M+   + + L   + + S+ + Y    + W+L K +P   + V+  +V V+  L
Sbjct: 377 EQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKEDPAACAVVMKTSVGVVYLL 436

Query: 459 AILLQAFVPKLANKIF 474
           A LL+ F+P  +N++ 
Sbjct: 437 ACLLEPFMPSFSNEVL 452


>gi|195584739|ref|XP_002082162.1| GD25352 [Drosophila simulans]
 gi|194194171|gb|EDX07747.1| GD25352 [Drosophila simulans]
          Length = 1022

 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 123/528 (23%), Positives = 229/528 (43%), Gaps = 77/528 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTT-----GTDEHGQKIAK 60
           + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L        GT    + +A+
Sbjct: 256 VLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAE 315

Query: 61  AAQNAGVTTKVFVDQNS--------------RNFRDMADVLDISYDDFIRT----TEKRH 102
                 +  K F   N+                 ++  D++  ++ D ++     TE   
Sbjct: 316 NLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVE 375

Query: 103 HDTC----RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NP 156
              C    R L  +  +    + GC  G+   R       D+  K   G+  NA     P
Sbjct: 376 QLLCQKCDRFLADRFVEGTCPHPGC--GYEDARG------DQCDKC--GKLVNATELIRP 425

Query: 157 VQWMEEEGYFFRLSAYQDKL-LSYYESHPEFILPIERRN-------EVIS--FVKSGLKD 206
              +       R S   D+L +   ++ P+    +++         +VI+  ++K GLK 
Sbjct: 426 RCKVCNTAPVLRSS---DQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKP 482

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD---- 259
             ++R    WGI +P +   + + YVW DA   Y++ T           ++W PA     
Sbjct: 483 RCITRD-LKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTK---EYQQWWQPAKGTDV 538

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +
Sbjct: 539 ELFQFMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGND 598

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +E G+  D  R++L      G+D  +  + L  R N++L N +GN V+R++    K++
Sbjct: 599 A-QETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF 657

Query: 374 DGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
              +P     T  DE + L++ +R L+    +M+   +   +  ++++    + Y  +Q+
Sbjct: 658 SSTVPE--VITTQDELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQ 715

Query: 433 PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PW L K   D   RAST++ + V +   LA LL  ++P  A  +F  L
Sbjct: 716 PWSLLKGTDDQKKRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQL 763


>gi|213618743|ref|ZP_03372569.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 239

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 7/213 (3%)

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D
Sbjct: 1   GKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDAD 60

Query: 324 ALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           +LRY+   +++   D    + +   +RVNAD+ N + NL SR+   I K +DG++    A
Sbjct: 61  SLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELA 120

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
               D  +    +     I E  +++   +A+ ++++L    +RY D Q PW + K    
Sbjct: 121 ----DPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGR 176

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            A    +  + + + R L   L+  +P L+ ++
Sbjct: 177 DADLQAICSMGINLFRVLMTYLKPVLPTLSERV 209


>gi|254419987|ref|ZP_05033711.1| methionyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186164|gb|EDX81140.1| methionyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 572

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/517 (22%), Positives = 208/517 (40%), Gaps = 50/517 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGL------DVLFTTGTDEHGQKI 58
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R   L      +VL+   TDEHG   
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVWARFKRAQVLPDGSRHEVLYICATDEHGTPA 62

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             AA  AG   + + D+     +       +SYD F R++  ++H   +   + +   G 
Sbjct: 63  ELAAAAAGQDVRTYCDEQHEIQKAAGQAFGLSYDWFGRSSNPQNHRLTQHFAEALEKNGL 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           I +      YS+ D  +  D  V     + G  G   +   N  + ++        S+  
Sbjct: 123 IEERVDRMIYSIDDARFLPDRYVEGTCPHCGHVGARGDQCDNCGRLLDPTDLIDPYSSVS 182

Query: 174 -DKLLSYYESHPEFILPIERRNEVISFVKS------------------GLKDLSLSRKTF 214
             K L   ++   ++L      ++ ++V S                  GL D  ++R   
Sbjct: 183 GSKNLEVRDTRHLYLLQTRIEPQIRAWVDSKTGWQVLAKSIAYKHLDEGLIDRGITRD-L 241

Query: 215 DWGIKI-------PDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPAD------- 259
            WG+ +       P     + YVW DA   Y+  T  + +   GS   +W  D       
Sbjct: 242 AWGVPVLKDGFPRPGMEDKVFYVWFDAPIEYIAATEEWAEATGGSWRDWWRLDEGAEDVR 301

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +  +GKD + FH + +PA ++ +  P     ++ +  ++   G K S S    +   + 
Sbjct: 302 YVQFMGKDNVAFHTVSFPATIIGSGEPWKTVDQLKAFNWLNWYGGKFSTSQKRGVFMDQA 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E +  D  R+ L        D  +  +  +   N DLA+ +GN V+R V      +DG+
Sbjct: 362 LELLPADYWRWRLTAYGPEHADSAFTWEDFQASTNKDLADVLGNFVNRIVKFAESKFDGV 421

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G     +  + +     + E  E  +     +A + + ++    + Y     PW  
Sbjct: 422 VPEGGEAGPVEIQLEADIKAGIAEATEQFEAMEFRKAASALRAVWVLGNEYLQVAAPWTA 481

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            KT+ DRA+  +   + ++   A L    +P  A KI
Sbjct: 482 LKTDRDRAAVGVRTGLNLVALFARLAAPILPFSAEKI 518


>gi|213403284|ref|XP_002172414.1| methionyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000461|gb|EEB06121.1| methionyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 781

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 120/537 (22%), Positives = 225/537 (41%), Gaps = 70/537 (13%)

Query: 1   MKEREK-----------LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFT 48
           M+ER+K           + I++A+ Y N  PH+G+     + ADV AR+HR      L+ 
Sbjct: 207 MQERKKSGVLPKPNSRNILITSALPYVNNVPHLGNIIGSTLSADVFARYHRARNNTTLYI 266

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
            GTDE+G      A   GV+ K   D+  +  +++ D   + +D F RTT  +  +  + 
Sbjct: 267 CGTDEYGTATETKALEEGVSPKELCDKYHKLHKEVYDWFQLDFDFFGRTTTPKQTEISQH 326

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GAD----------GQYYNA- 152
           ++ ++ ++  +     +  Y    + +  D  V       G D          GQ  NA 
Sbjct: 327 IFNRLYERDYMEVDSMTQLYCEEHKGFLADRYVEGTCPKCGFDDARGDQCDGCGQLLNAF 386

Query: 153 ----------QHNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVK 201
                     +  PV+  E    F  L   Q ++  +++ S  E            S++K
Sbjct: 387 ELINPTCKLDKTTPVK-RETRHIFLSLDKLQPQIQEWFQKSSKEGHWSNNGVAITDSWLK 445

Query: 202 SGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLD-------NPDGS 251
            GL+   ++R    WG  +P +     ++YVW DA   Y++ T  Y D       NP+  
Sbjct: 446 EGLRPRCITRD-LKWGTPVPLEEFKDKVLYVWFDATIGYISITANYTDEWKQWWKNPENV 504

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGN 309
           K          +GKD + FH + +P  LL  +    +   + +  ++ ++  K SKS G 
Sbjct: 505 KL------YQFMGKDNVPFHTVIFPGSLLGTDEKWTMLHHINTTDYLNYESGKFSKSRGI 558

Query: 310 VIDPIEVIEEVGVD--ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            +      +E+G+     RY+L+       D  +       R N++L   IGNLV+R V 
Sbjct: 559 GVFGNNA-KELGLSPSVWRYYLLASRPETSDTMFTWKEFITRHNSELLANIGNLVNRVVK 617

Query: 368 MILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                Y+G++P      + G+     E +  V + +L++    ++   +   L   + L 
Sbjct: 618 FTTAKYNGLVPYYLEDASVGSGKLKTELVKDV-NAILRKYNTALEAVKLREGLRIAMELS 676

Query: 422 SEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  +++  D +   +L      + +  +  T+ ++  LA +L  F+P  ++ I+  L
Sbjct: 677 ARGNQFLQDNRVDNKLFTNERQKCADAIGYTLNLVYLLASILSPFIPATSDSIYKQL 733


>gi|45201428|ref|NP_986998.1| AGR332Cp [Ashbya gossypii ATCC 10895]
 gi|44986362|gb|AAS54822.1| AGR332Cp [Ashbya gossypii ATCC 10895]
          Length = 750

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/519 (22%), Positives = 221/519 (42%), Gaps = 54/519 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L +++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      
Sbjct: 193 ERNVL-VTSALPYVNNVPHLGNIVGSVLSADIYARYCKARNYNTLFICGTDEYGTATETK 251

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G++ +   D+  +   D+    +I +D F RTT     +  + ++ K+++ G + +
Sbjct: 252 ALEEGISPRELCDKFHKIHADVYKWFNIGFDYFGRTTTAAQTEIAQDIFNKLNENGYLEE 311

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN---AQHNPVQWME--------- 161
                 Y     A+  D  V        Y+ A G   +   A  +P + +          
Sbjct: 312 KTMKQLYCSEHNAFLADRYVEGECPKCQYEDARGDQCDKCGALLDPFELVNPRCKLDNTK 371

Query: 162 -----EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                 +  F  L+  +  +  +  ES  +       R    S++K GL+   ++R    
Sbjct: 372 PEPRTSDHIFLSLNKLEKDIAQWVAESSEKGNWSKNSRTITNSWLKEGLEPRCITRDLV- 430

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           WG  +P +   + ++YVW DA   Y + T    N      ++W  P ++ +   +GKD +
Sbjct: 431 WGTPVPLEKYKEKVLYVWFDATIGYSSITA---NYTKEWERWWKNPENVSLYQFMGKDNV 487

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325
            FH + +P   L       +   + +  ++ ++G K SKS G  V         +  D  
Sbjct: 488 PFHTVIYPGSQLGTGDKWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAKDTGIPPDVW 547

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------ 379
           RY+L        D  +    +  + N++L   +GN V+R V  +   Y+ ++P+      
Sbjct: 548 RYYLASVRPETSDSQFSWKDMVTKNNSELLANLGNFVNRLVKFVNAKYNRVVPSFNVDNL 607

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438
           PG F +  + I  + S  + E    M+     R L   ++L +  +++    K    L  
Sbjct: 608 PG-FKQLTDDINHILSNYVAE----MELAREKRGLELAMALSARGNQFLQENKLDNSLFS 662

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +PD++  V+ V + +I  +A ++  F+P+ A  I  +L
Sbjct: 663 QSPDKSDAVVGVGLNIIYAVASVIAPFMPQTAETINRML 701


>gi|331247159|ref|XP_003336209.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309315199|gb|EFP91790.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 188

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 1/106 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-TGTDEHGQKIAKAAQNA 65
            Y+ST I Y N+ PHIGH + M+IADVL R+++L      F  TGTDEHG K+ +AA+N 
Sbjct: 78  FYVSTPIFYVNSVPHIGHLHSMVIADVLGRYNQLKTDTPSFMLTGTDEHGSKVQRAAENN 137

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
             + +   +  S  FR +A   ++ YDDFIRTTE RHH   + LW+
Sbjct: 138 RQSPQELCEAVSDRFRQLARAANVKYDDFIRTTEPRHHRAAQHLWE 183


>gi|261198955|ref|XP_002625879.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239595031|gb|EEQ77612.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|327350782|gb|EGE79639.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 646

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 129/571 (22%), Positives = 243/571 (42%), Gaps = 72/571 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD---------GLDVLFTTGT 51
           K    + I++A+ Y N  PH+G+    ++ ADV A +  L          G   L+  GT
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADVFASYVALPYIKAKKKACGRPTLYVCGT 70

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           DE+G      A   GVT +    + ++  R++ +  +I +D F RT   +H +  + ++K
Sbjct: 71  DEYGTTTETKALEEGVTPEELCAKYNKLHREVYEWFEIGFDVFGRTPTAQHTEISQEIFK 130

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEE 163
           ++ + G + +      +  + +++  D  V        Y  A G   +   N +   E +
Sbjct: 131 RLYENGFLTEKTAEHPFCEKHDSFLADRYVEGECPRCAYNDARGDQCDKCGNLLDPFELK 190

Query: 164 GYFFRLSAYQ-------------DKLLSYYES--HPEFI---LPIERRNEVISFVKSGLK 205
               +L                 DKL    E+  HP       P   R    S++K GLK
Sbjct: 191 NPRCKLDGATPVLRNTRHIYLMLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLK 250

Query: 206 DLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADL 260
           D  ++R    WG+ +P +   + ++YVW +A   Y + T     PD    + W   P ++
Sbjct: 251 DRCITRDV-KWGVPVPLEGYEKKVLYVWFEACIGYPSITANY-TPDW---ELWWRDPDNV 305

Query: 261 HV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIE 315
            +   +GKD + FH++ +P   +       K   + +  ++ ++  K SKS G  +   +
Sbjct: 306 QLYQFLGKDNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFG-D 364

Query: 316 VIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--K 371
             +E GV  D  RY+L++      D  ++        N++L   +GNLV+R V ++   K
Sbjct: 365 NAQETGVPADVWRYYLLKNRPETGDTQFEWRSFVDANNSELLAKLGNLVNRMVKLVASPK 424

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            Y+ ++P     TE  +  L   + +L++    M++  +   +   + +V   +    + 
Sbjct: 425 AYNSIVPD-FTVTEPFKPALEEITTLLRQYITEMESVHLRSGVGTAMKIVEAGNGLIQSN 483

Query: 432 K-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K    L    P+RA+ V+ + V +I  ++ +   ++P  +  I + L V   N    SLD
Sbjct: 484 KLDNSLIANEPERAAAVVGIVVNLIYLISSIFSPYLPATSASILEQLNVPFTN--IPSLD 541

Query: 491 ---------QRLKPGFMLHKT---FDPIFPR 509
                    + +KPG  + K    F  I P+
Sbjct: 542 DLKDEGWEPELIKPGHKIGKAKYLFSQIDPK 572


>gi|309808438|ref|ZP_07702337.1| tRNA ligases class I (M) [Lactobacillus iners LactinV 01V1-a]
 gi|308168266|gb|EFO70385.1| tRNA ligases class I (M) [Lactobacillus iners LactinV 01V1-a]
          Length = 110

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 68/102 (66%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEH 102


>gi|156311420|ref|XP_001617781.1| hypothetical protein NEMVEDRAFT_v1g156733 [Nematostella vectensis]
 gi|156195775|gb|EDO25681.1| predicted protein [Nematostella vectensis]
          Length = 311

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 144/312 (46%), Gaps = 35/312 (11%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M E  K Y I+ A+ Y N   HIGH A   + +D+ AR+ RL G DV F  G+DEHG  I
Sbjct: 1   MLENPKRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLQGKDVAFMCGSDEHGVAI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           +  A+  G+T +  +D+     R       IS+D++ RT+ K HHDT +  ++K+ + G 
Sbjct: 61  SMKAKKEGITPQEVIDKYDGIIRQSFLDFGISFDNYSRTSSKIHHDTAQEFFRKLYENGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQH-------------NPVQWME 161
             +      Y  + + +  D  V     K  + + Y  Q              NP   + 
Sbjct: 121 FIEQTTEQLYDAKADQFLADRFVTGTCPKCGNEEAYGDQCEKCGSSLNATDLINPKSTIT 180

Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILPIERRN-------EVISFVKSGLKDLSLSRKT 213
            E    + + +    L+ Y++   E++L   + +       +V S+V  GL+  +++R  
Sbjct: 181 GETPVLKETKHWFLPLNEYDTFLREWVLEGHKNDWKSNVYGQVKSWVDGGLEPRAVTRD- 239

Query: 214 FDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +      +YVW DA   Y++ T      +G   + +  D     +H IGKD
Sbjct: 240 LDWGIDVPVEGAEGKKLYVWFDAPIGYISATKEWAAKEGKDWEPYWKDQDTKLVHFIGKD 299

Query: 267 ILRFHAIYWPAF 278
            + FH I +PA 
Sbjct: 300 NIVFHCIIFPAM 311


>gi|47222843|emb|CAF96510.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1242

 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 144/294 (48%), Gaps = 20/294 (6%)

Query: 198  SFVKSGLKDLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
            S+++ GLK   ++R    WG  +P  D    + YVW DA   YL+ T  Y D  +    K
Sbjct: 818  SWLRDGLKPRCITRD-LKWGTPVPHEDFKDKVFYVWFDAPIGYLSITANYTDEWE----K 872

Query: 255  FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307
            +W     V     + KD + FH++ +P  LL A  N  L   + +  ++ ++  K SKS 
Sbjct: 873  WWKNPTQVELYNFMAKDNVPFHSVVFPCSLLGARDNYTLVNHLVATEYLNYEDTKFSKSR 932

Query: 308  G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            G  V   +    ++  D  R++L+     G+D  +    L  + N++L N +GN ++R+ 
Sbjct: 933  GVGVFGDMAKDTDIPCDVWRFYLLYVRPEGQDSSFSWTDLATKNNSELLNNLGNFINRAG 992

Query: 367  SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
              + K ++G +P      + D+ +L++    LQ+  + M    I  AL  ++++    ++
Sbjct: 993  MFVTKFFEGCVPA-MVLQQEDKKLLALVGWELQQYIQLMDRVKIRDALKHILNISRHGNQ 1051

Query: 427  YFDAQKPW-ELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y    +PW ++K  + D  RA TV  V+V +   L+++L  ++P ++  I D L
Sbjct: 1052 YIQINEPWKKIKGADADRQRAGTVTGVSVNIACLLSVMLSPYMPIVSQTIRDQL 1105



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++ + +++A+ Y N  PH+G+    ++ ADV +R+ RL G +VL+  GTDE+G     
Sbjct: 595 KDKKNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYSRLRGWNVLYLCGTDEYGTATET 654

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR-ILWK 111
            A   G+T     D+       +     I +D F RTT ++  +  + I W+
Sbjct: 655 KALEEGLTPLEICDKYHAVHAAIYKWFQIDFDFFGRTTTEKQTEIAQDIFWR 706


>gi|41615241|ref|NP_963739.1| hypothetical protein NEQ457 [Nanoarchaeum equitans Kin4-M]
 gi|68565990|sp|Q74MZ1|SYM_NANEQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|40068965|gb|AAR39300.1| NEQ457 [Nanoarchaeum equitans Kin4-M]
          Length = 776

 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 142/297 (47%), Gaps = 28/297 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLS 281
           ++YVW DA   Y++ T +  +P+     +W     P  +H IGKD + FH I+WPA ++ 
Sbjct: 285 VLYVWFDAPIGYISFT-FETSPEYRY--YWDEKEKPYIVHFIGKDNIPFHTIFWPALIIG 341

Query: 282 ANL-------------PLPKKVFSHGFILHKGEKISKS-LGNVIDPIEVIEEVGVDALRY 327
            NL              LP +VF + ++ + G+K SKS    V        ++ +D  R+
Sbjct: 342 RNLGYKNINHILDFDIALPYQVFGNPYLNYYGKKFSKSKRWGVFLDNIDKIDIDIDYFRF 401

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L       KD  ++ D  K+ +N +L + IGN + R ++ I   ++G+ P      + D
Sbjct: 402 YLAYIHTVSKDMSFEWDQFKEVINKELVDNIGNFIHRVLTFIYNRFNGIPPKIEHLDDKD 461

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           + +L    ++ +++   +    I  AL ++++  +  ++YF  ++PW   KTN       
Sbjct: 462 KELLDKIKQLPEKVFNFIWKGEIGNALREIVNTSNLANKYFQEKEPW---KTN---DPNT 515

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           + +  E ++   ILL  F+P+ A  +  I  +  +    Q +++  KP  + HK  D
Sbjct: 516 IAIAFEAVKTFIILLYPFIPEKAKLLASIANIDIKWDFNQKVEKINKPFIVFHKLSD 572



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ ++ A+ Y N   H+GH A   + AD+  RF +L G + L+  G+D++G  I   A  
Sbjct: 2   RILVTAALPYSNGPIHLGHIAGAYLPADIFYRFVKLKGYNALYICGSDQYGSPIELNAIK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
             +  K +     +   ++    +I +D +  T E   H
Sbjct: 62  LNIDPKDYASFYRKIQEEIFKKFNIKFDIYSGTAESNIH 100


>gi|164663049|ref|XP_001732646.1| hypothetical protein MGL_0421 [Malassezia globosa CBS 7966]
 gi|159106549|gb|EDP45432.1| hypothetical protein MGL_0421 [Malassezia globosa CBS 7966]
          Length = 712

 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 179/423 (42%), Gaps = 62/423 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + E + +++A+ Y N  PH+G+     + ADV AR+ R    + L+  GTDE+G      
Sbjct: 41  DEENVLVTSALPYVNNVPHLGNIIGSTLSADVFARYARTQNKNTLYICGTDEYGTATETK 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+ +   D+       + +   I +D F RTT  R  +  + +++K+ + G   +
Sbjct: 101 ALEDGVSPQALCDKYHALHAQVYEWFQIGFDYFGRTTTPRQTEIAQDVFRKLYENGYFEE 160

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYN------------------AQHN 155
                 Y    E +  D  V        Y  A G   +                   +  
Sbjct: 161 RVMRQLYCASCERFLADRYVNGICPKCDYDDARGDQCDKCGQLLDAVELKEPKCKLCKGT 220

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSY---------YESHPEFILPIERRNEVISFVKSGLKD 206
           P Q  + +  F R+ A Q +  ++         + S+  FI          S+ K GL+ 
Sbjct: 221 P-QERDSKHMFLRIDALQPQTEAWASEMSKKGKWSSNGTFI--------TESWFKEGLRP 271

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262
            S+SR    WG+ +P       ++YVW DA   Y + T    N      K+W    HV  
Sbjct: 272 FSVSRD-LKWGVPVPLQGYEDKVLYVWFDAPIGYPSITA---NYTSEWEKWWKNPEHVRL 327

Query: 263 ---IGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD +RFH + +P+ L+    P  +   + +  ++ ++G K SKS  N+    +  
Sbjct: 328 YQFMGKDNVRFHTVIFPSCLIGTKDPWTMLYHINTAEYLQYEGGKFSKSR-NIGVFGDRA 386

Query: 318 EEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +++GV     RY+L+       D  +       R N++L   +GN V+R ++  +K Y+G
Sbjct: 387 KDIGVSPSVWRYYLLSTRPESSDSQFVWHDFVTRNNSELLKNLGNFVNRILT-FMKKYEG 445

Query: 376 MIP 378
            +P
Sbjct: 446 RLP 448


>gi|238761088|ref|ZP_04622065.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238761341|ref|ZP_04622317.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700315|gb|EEP93056.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700568|gb|EEP93308.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 415

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 254 KFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           +FW  D      H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS G
Sbjct: 18  EFWRKDSTTDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRG 77

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVS 367
             I     ++ +  D LRY+   +++   D    + +   +RVNAD+ N + NL SR+  
Sbjct: 78  TFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAG 137

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            I K + G +    A  E    +    +     I +   ++   +A+ ++++L    +RY
Sbjct: 138 FISKRFAGKLADHLASPE----LYKTFTDAAVSIADAYNSRESSKAIREIMALADVANRY 193

Query: 428 FDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
            D Q PW + K +   A    +  + + + R L   L+  +P L  +
Sbjct: 194 VDEQAPWVVAKEDGRDADLQAICSMGINLFRVLMTYLKPVLPALTAR 240


>gi|33322961|gb|AAQ07217.1|AF496525_1 methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 90

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 62/90 (68%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW  AL NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+
Sbjct: 1   VWXXALANYITALGYGLEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQ 60

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           VF HG++L   +K+SKS GN + P  +I  
Sbjct: 61  VFGHGWVLIYKDKMSKSKGNAVYPESLISR 90


>gi|189196444|ref|XP_001934560.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980439|gb|EDU47065.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 637

 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 215/514 (41%), Gaps = 53/514 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G      A    V
Sbjct: 19  ITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATETKAIEEKV 78

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K   D+      ++    +IS+D F RT  ++  D  + ++ K+   G + +   +  
Sbjct: 79  SPKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGFLEEQTTTQP 138

Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ------ 173
           Y    +++  D  V        Y+ A G   +   + +  +E +    +L          
Sbjct: 139 YCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGATPVPRET 198

Query: 174 -------DKLLSYYE-----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  DKL    E     S  E            S++K GL+   ++R    WG  +P
Sbjct: 199 KHVYLCLDKLQPLEEEWFKKSSKEGNWSSNGVQITSSWLKEGLRPRGITRD-LKWGTAVP 257

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIY 274
            +     +MYVW DA   Y++ T           ++W    HV     +GKD + FH + 
Sbjct: 258 LEGYEDKVMYVWFDACIGYVSITATYTE---DWKQWWHNPEHVKLYQFMGKDNVPFHTVV 314

Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLV 330
           +P   +       +   + +  ++ ++  K SKS  N+       +E G+  D  RY+L+
Sbjct: 315 FPCSQIGTKDKWTMLNTISTTEYLNYEKGKFSKSR-NIGVFGNNAKETGIPSDVWRYYLL 373

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDE 388
                  D  ++ DG     N +L   +GN ++R +  +   K YD ++P    +T+ D+
Sbjct: 374 SHRPETGDTEFEWDGFIAANNNELLKNLGNFINRVIKFVNNAKIYDSVVPD---YTKFDD 430

Query: 389 SILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443
              +   + + ++ +     +++  I  ALA  + + S  +    D +   +L    PDR
Sbjct: 431 PYFTEHRKKVNDLLKTYIAELEDVKIRAALATALHVSSLGNLLLQDNKLDNKLATEQPDR 490

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + V+ + +  I  LA L+Q F+P     I   L
Sbjct: 491 CAAVVGLALSQIHLLASLIQPFMPDTTAAILSQL 524


>gi|330945683|ref|XP_003306603.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1]
 gi|311315833|gb|EFQ85309.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1]
          Length = 637

 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 215/514 (41%), Gaps = 53/514 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G      A    V
Sbjct: 19  ITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATETKAIEEKV 78

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K   D+      ++    +IS+D F RT  ++  D  + ++ K+   G + +   +  
Sbjct: 79  SPKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGYLEEQTTTQP 138

Query: 128 YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ------ 173
           Y    +++  D  V        Y+ A G   +   + +  +E +    +L          
Sbjct: 139 YCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGATPVPRET 198

Query: 174 -------DKLLSYYE-----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  DKL    E     S  E            S++K GL+   ++R    WG  +P
Sbjct: 199 KHVYLCLDKLQPLEEEWFKKSSKEGNWSSNGVQITSSWLKEGLRPRGITRD-LKWGTAVP 257

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIY 274
            +     +MYVW DA   Y++ T           ++W    HV     +GKD + FH + 
Sbjct: 258 LEGYEDKVMYVWFDACIGYVSITATYTE---DWKQWWHNPEHVKLYQFMGKDNVPFHTVV 314

Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLV 330
           +P   +       +   + +  ++ ++  K SKS  N+       +E G+  D  RY+L+
Sbjct: 315 FPCSQIGTKDKWTMLNTISTTEYLNYEKGKFSKSR-NIGVFGNNAKETGIPSDVWRYYLL 373

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDE 388
                  D  ++ DG     N +L   +GN ++R +  +   K YD ++P    +T+ D+
Sbjct: 374 SHRPETGDTEFEWDGFIAANNNELLKNLGNFINRVIKFVNNAKIYDSVVPD---YTKFDD 430

Query: 389 SILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443
              +   + + ++ +     +++  I  ALA  + + S  +    D +   +L    PDR
Sbjct: 431 PYFTEHRKKVNDLLKTYIAELEDVKIRAALATALHVSSLGNLLLQDNKLDNKLATEQPDR 490

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + V+ + +  I  LA L+Q F+P     I   L
Sbjct: 491 CAAVVGLALSQIHLLASLIQPFMPDTTAAILSQL 524


>gi|19112378|ref|NP_595586.1| cytoplasmic methionine-tRNA ligase Mrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|51702161|sp|Q9UUF2|SYMC_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|5679723|emb|CAB51763.1| cytoplasmic methionine-tRNA ligase Mrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 782

 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 175/415 (42%), Gaps = 53/415 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+     + ADV AR+HR    + L+  GTDE+G      A   
Sbjct: 224 ILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATETKALEE 283

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ K   D+     +++ D  +I +D F RTT  +     + ++ K+ +   +     +
Sbjct: 284 GVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMAIDTMT 343

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA------------------QHNPVQW 159
             Y    + Y  D  V        Y  A G   +                   +  PV+ 
Sbjct: 344 QLYCEVHQGYLADRYVEGTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRATPVK- 402

Query: 160 MEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E +  F  L   Q  + S+  +S  E       R+   S++K GL+   ++R    WG 
Sbjct: 403 RETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRD-LKWGT 461

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRF 270
            +P +     ++YVW DA   Y++ T  Y D  +    K+W  P  + +   +GKD + F
Sbjct: 462 PVPLEEFKGKVLYVWFDATIGYISITANYTDEWE----KWWRNPEQVKLYQFMGKDNVPF 517

Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVD 323
           H + +P+ LL       +   + +  ++ ++  K SKS      GN    I +   V   
Sbjct: 518 HTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSV--- 574

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             RY+L+       D  +       R N++L   +GN V+R++      Y+G++P
Sbjct: 575 -WRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAKYNGLVP 628


>gi|260948086|ref|XP_002618340.1| hypothetical protein CLUG_01799 [Clavispora lusitaniae ATCC 42720]
 gi|238848212|gb|EEQ37676.1| hypothetical protein CLUG_01799 [Clavispora lusitaniae ATCC 42720]
          Length = 746

 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 114/514 (22%), Positives = 223/514 (43%), Gaps = 45/514 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 187 ILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNALFVCGTDEYGTATETKALEE 246

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT +   D+  +  +D+ D  DI++D F RTT     +  + ++ K+     + +    
Sbjct: 247 HVTPQELCDKYHKVHKDVYDWFDINFDYFGRTTTPLQTEIAQDIFMKLYHNNYLEEQTTE 306

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---PVQWMEEEG---------- 164
             Y     ++  D  V        Y+ A G   +   N   P + +E             
Sbjct: 307 QLYCEVHHSFLADRFVEGTCPKCAYEDARGDQCDKCGNLLNPFELIEPRCKLDNSKPVPR 366

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIK 219
                + +L+  + +L  + E   E     +    +  S++K GL    ++R    WG  
Sbjct: 367 NSTHVYLKLNELEPELKEWVEEAAEKGAWSKNSKTITNSWLKQGLDPRCITRDLV-WGTP 425

Query: 220 IPDDP--QYIMYVWIDALTNYLT-TTGYLDNP---DGSKAKFW--PADLHV---IGKDIL 268
           +P +     ++YVW DA   Y++ T  Y  +    DG + ++W  P ++++   +GKD +
Sbjct: 426 VPLEKFKDKVLYVWFDATIGYVSITANYFKDKEIKDGWQ-QWWRNPENVNLYQFMGKDNV 484

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  +     
Sbjct: 485 PFHTVVFPATQIGTRDKWTKLHHLNTTEYLQYEDGKFSKSRGVGVFGNNARETGISPSVW 544

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L        D  +       R N++L   +GN V+R V   +  Y+G++P+  A   
Sbjct: 545 RYYLASVRPETSDSHFSWKEFVTRNNSELLANLGNFVNRLVKFAIAKYNGVVPSYDANKI 604

Query: 386 SD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDR 443
           ++  S     + +L    ENM+   + R L   +++ S  +++  D +    L    PD 
Sbjct: 605 ANYASFEKDVNDLLTSYIENMEAVNLRRGLEIAMAISSRGNQFLQDNKLDNSLFNNTPDV 664

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+ V + +I  ++ ++  F+P   ++I ++L
Sbjct: 665 SDAVVGVGLNLIYLVSAVISPFMPATRDQICEML 698


>gi|26454791|gb|AAH40934.1| MARS2 protein [Homo sapiens]
          Length = 265

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+++  H      G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + +
Sbjct: 4   PQRICVHSHWTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKV 63

Query: 347 KKRVNADLANGIGNLVSRSVSMIL---KDYDGMIPT-----PGAFTES------DESILS 392
            K +N++LA+ +G L++R  +  +   + Y     T     PG    S      D +++S
Sbjct: 64  VKLLNSELADALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVS 123

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLY 449
             + + +++ ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+
Sbjct: 124 AVATLPKQVADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLH 183

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           V +E +R    LLQ   P LA+K+   L V+   R    L
Sbjct: 184 VALECLRVFGTLLQPVTPSLADKLLSRLGVSASERSLGEL 223


>gi|171695362|ref|XP_001912605.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947923|emb|CAP60087.1| unnamed protein product [Podospora anserina S mat+]
          Length = 623

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 120/556 (21%), Positives = 222/556 (39%), Gaps = 105/556 (18%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++A+ Y N  PH+G+    ++ ADV ARF R  G +VLF  GTDE G   +  A+  
Sbjct: 19  ILVTSALPYVNNVPHLGNIIGSVLSADVFARFWRGRGGNVLFVGGTDEFGTTTSLRAREE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +   D+  +  +D+ +  +IS+D F RTT  RH +             DI+K  + 
Sbjct: 79  GVAPQELCDKYHKIHKDVYEWFNISFDIFGRTTNDRHTEITH----------DIFKELWG 128

Query: 126 -GWYSLRD-EAYYND-------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            G   +RD E  + +       D + +G   +  + +    Q  E + + F ++   +  
Sbjct: 129 EGLIEIRDSEQLWCEECKGFVFDRLVEGTCPECGSEEARGDQCGECD-WVFDITELVEPK 187

Query: 177 LSYYESHP------EFILPIERRNEVISFVK--------------SGLKDLSLSRKTFDW 216
              +   P         L ++    ++                  +G   + ++R   DW
Sbjct: 188 CKIHGGRPALRPSKHLFLKLDNHGPLLENQAKEQGEDWLVNAKEINGNSSICITRDGLDW 247

Query: 217 GIKIPDD----PQYIMYVWIDALTNYLTTTGY------------------LDNPDGSKAK 254
           G  +P         + Y W DAL  Y++ T                    + + D + + 
Sbjct: 248 GTPVPGRLAGFDGKVFYPWWDALLGYISITASGMEGESWRAWWRPSTPIAMKSHDDNDSS 307

Query: 255 FW-PAD-----------LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKG 300
           F+ P D              +G D + FH I +PA LL  + P   P+ + S  F+ ++G
Sbjct: 308 FYKPGDNTPKSDVGVRLSQFLGADNIFFHGILFPATLLPLDPPYTAPRHIASTRFLTYQG 367

Query: 301 EKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGI 358
            + SKSLG  V         +  D  R+FL++    G +D  +  D L +  N      I
Sbjct: 368 GRFSKSLGVGVFGDNAQQTGLSADVFRFFLLQSRPEGMEDTDFTWDRLVEVHNELFVGKI 427

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           G LV +    +L D +G++P   +    +  +LS   + ++  +       +H+ L Q +
Sbjct: 428 GKLVHK----VLTDLNGVVPH--SHDHINGPLLSSVGQTIKRFKGG-----VHKLLVQYV 476

Query: 419 SLVSEVDRYFDAQKPWELKK---------------TNPDRASTVLYVTVEVIRQLAILLQ 463
           + +   +         EL                 T+      VL V + ++  +  +L+
Sbjct: 477 TQLKNSELRGGLMTTLELTCGGIALLDLVSNRVMLTDTCERQAVLEVGINLVYLVVRMLE 536

Query: 464 AFVPKLANKIFDILFV 479
            ++PK    ++++L V
Sbjct: 537 PYIPKTVESLYEVLGV 552


>gi|2257528|dbj|BAA21422.1| methionyl-tRNA synthetase [Schizosaccharomyces pombe]
          Length = 577

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 175/415 (42%), Gaps = 53/415 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+     + ADV AR+HR    + L+  GTDE+G      A   
Sbjct: 19  ILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATETKALEE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ K   D+     +++ D  +I +D F RTT  +     + ++ K+ +   +     +
Sbjct: 79  GVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMAIDTMT 138

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNA------------------QHNPVQW 159
             Y    + Y  D  V        Y  A G   +                   +  PV+ 
Sbjct: 139 QLYCEVHQGYLADRYVEGTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRATPVK- 197

Query: 160 MEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E +  F  L   Q  + S+  +S  E       R+   S++K GL+   ++R    WG 
Sbjct: 198 RETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRD-LKWGT 256

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW--PADLHV---IGKDILRF 270
            +P +     ++YVW DA   Y++ T  Y D  +    K+W  P  + +   +GKD + F
Sbjct: 257 PVPLEEFKGKVLYVWFDATIGYISITANYTDEWE----KWWRNPEQVKLYQFMGKDNVPF 312

Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKS-----LGNVIDPIEVIEEVGVD 323
           H + +P+ LL       +   + +  ++ ++  K SKS      GN    I +   V   
Sbjct: 313 HTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSV--- 369

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             RY+L+       D  +       R N++L   +GN V+R++      Y+G++P
Sbjct: 370 -WRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAKYNGLVP 423


>gi|300707442|ref|XP_002995928.1| hypothetical protein NCER_101052 [Nosema ceranae BRL01]
 gi|239605171|gb|EEQ82257.1| hypothetical protein NCER_101052 [Nosema ceranae BRL01]
          Length = 525

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 206/496 (41%), Gaps = 53/496 (10%)

Query: 35  ARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF 94
           ARF R +  DV+F +GTDE+G  I  AA     T     ++N    + + D  +I +D F
Sbjct: 3   ARFCRKNNEDVVFLSGTDEYGTAIEMAAFAQNKTPLQICEENRIIHKKIYDWFNIDFDFF 62

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--------YKGAD 146
             TT   H    +  + KI + G   +     ++  + + +  D  V        Y  A 
Sbjct: 63  GHTTSTAHTKNVQDFFNKIHNNGFFTEQEIEQFFCDKCQIFLADRYVVGTCKFCKYTDAK 122

Query: 147 GQYYNAQHNPVQWME-----------------EEGYFFRLSAYQDKLLSYYESHPEFILP 189
           G   +   +  + ++                     FF  + ++DKL   + ++ ++   
Sbjct: 123 GDQCDGCGHTYKSLDLIDAKCTLCHSFPNIKSTRHLFFDFNNFKDKLQKLFNTNSQY-WS 181

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFD-WGIKIP--DDPQYIMYVWIDALTNYLT-----T 241
              +    S++   L    ++R   + WG+ +P  D  + + YVW DA+  Y T      
Sbjct: 182 ENGKQITKSWLDQELLPRCMTRDLKNRWGVPVPLKDFEEKVFYVWFDAVIGYFTFYKEYV 241

Query: 242 TGYLDNPDGSKAKFWPAD--------LHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVF 291
               ++ +  K   +  D        +  +GKD + FH I +P+ + + N   PL KK+ 
Sbjct: 242 AARSESKELDKNNVFATDNILQDCELVQFMGKDNVFFHTIVFPSLIFATNDSYPLIKKLS 301

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL-RYFLVREIACGKDGFYDKDGLKKR 349
              F+L + EK SKS G+ I  +++++  +G   L RY+L +      D  +        
Sbjct: 302 VTEFLLFENEKFSKSRGHGIFGLDLVDNTMGQSCLWRYYLAKIRPEKCDSNFSFTHFTNV 361

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           ++ADL N IGN  +R +  I    D +I +       D+ ++    ++ +E   +     
Sbjct: 362 IDADLNNNIGNFCNRVLKYIKNKNDKLI-SIDKLEHRDDLMVQTIDKIYKEYLTSFSAIR 420

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           I  AL +++ +    + Y   Q+    K   P +   V +  V +I Q   LL+ F+P  
Sbjct: 421 IREALEKILEISKVGNEY--VQQVVSSKIEVP-KGFQVAFSIVVLIGQ---LLEPFIPVS 474

Query: 470 ANKIFDILFVADENRC 485
           + K+  +     EN C
Sbjct: 475 SEKLLKMCNRKKENFC 490


>gi|212545893|ref|XP_002153100.1| methionyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210064620|gb|EEA18715.1| methionyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 677

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 166/366 (45%), Gaps = 33/366 (9%)

Query: 166 FFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           + RL A +DK++ ++E    E    I   + V S++  GLK  +++R    WG+ IP   
Sbjct: 225 YLRLDALKDKIVPWFEKVSKENDWSINTSSIVQSWIDRGLKPRAITRD-IKWGVPIPTGI 283

Query: 222 ---DDPQY---IMYVWIDALTNYLTTTGYL---DNPDGSKAKFW---PADLHV---IGKD 266
              D+  Y   + YVW DA   Y++ T      DN +G K + W   P  + +   +GKD
Sbjct: 284 EGLDEEAYKNKVFYVWFDACIGYVSITANYTDGDNLEGKKWEQWWKHPEQVSLFQFMGKD 343

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVD 323
            + FH+I +P   L + +   +  K+ +  ++ ++G K SKS G  V         VG D
Sbjct: 344 NVPFHSIIFPGSQLGSGMKWTQVHKISATEYLNYEGGKFSKSKGVGVFGTSAKDTGVGPD 403

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L+       D  +  D      N +L   +GNLV+R     +   DG +P   A+
Sbjct: 404 IWRFYLLSRRPESSDTEFKWDEFVSTNNNELLKNLGNLVARVTKFCIAKMDGTVP---AY 460

Query: 384 T-ESDESILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDRYF-DAQKPWELK 437
           + E+ +++L+   R +     +    M    +  AL  ++ + S  ++   D +    L 
Sbjct: 461 SEEAAKAVLTEHERQVNSYLTSYITFMDATKMRPALNDIMHISSLGNKLLQDNKLDNRLF 520

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-LDQRLKPG 496
              PDR + V+ + +  I  LA LL  F+P  +  IF+ L    E R     +   LKPG
Sbjct: 521 TEEPDRCAAVINIALNHIHLLASLLSPFMPATSKSIFEQLGAQPEARIPDKWVSDVLKPG 580

Query: 497 FMLHKT 502
             L ++
Sbjct: 581 HKLGES 586



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR++R  G   L+  G+DE+G      A   
Sbjct: 16  ILITSALPYVNNVPHLGNIIGSVLPADVFARYNRARGFPTLYICGSDEYGTATETKALEE 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH----HDTCRILWK 111
           GV+ +    +     + + D  +I +D F RT          D  R LW+
Sbjct: 76  GVSPEELCAKYHTIHKGIYDWFNIEFDIFGRTPTAHQTKIVQDVFRGLWE 125


>gi|313227339|emb|CBY22485.1| unnamed protein product [Oikopleura dioica]
          Length = 535

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 149/300 (49%), Gaps = 23/300 (7%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTG--------YLDN 247
           S++K GL+   ++R    WG+K+P D     + YVW DA   Y + T         +   
Sbjct: 196 SWIKKGLEPRCMTR-DLKWGVKVPKDGYDHKVFYVWFDAPIGYPSITAEYTPKWRDWWLA 254

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISK 305
            DG + K++      +GKD + FH++ +P++LL    P  L   + +  ++ ++  K SK
Sbjct: 255 KDGQEVKYY----QFMGKDNVPFHSVLFPSYLLGTGKPWNLVNVINATEYLNYENGKFSK 310

Query: 306 SLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           S G  +   +  E  +  D  R++L+      +D  +     + + N++L N +GN V+R
Sbjct: 311 SRGVGVFGNQASETNIPADVWRFYLIYMRPEVQDTEFQWTDFQMKNNSELLNNLGNFVNR 370

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +S ++K YDG +P+      +  + ++  + +L++  E M+N      L +V+++    
Sbjct: 371 GLSFVVKFYDGKVPS-AEINGNMRAWVAEVNELLKQYIECMENNHQREGLRRVLAISKLG 429

Query: 425 DRYFDAQKPW-ELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++     +PW ++K  +P   + AS  + ++  ++  L+ LL+ F+P  + +I   + VA
Sbjct: 430 NKLIQTWQPWVKVKSKDPALRNEASACVMLSANLVFLLSSLLEPFMPMTSFEIARQVGVA 489


>gi|210617648|ref|ZP_03291679.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
 gi|210149195|gb|EEA80204.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
          Length = 923

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 182/426 (42%), Gaps = 81/426 (19%)

Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE------ 185
           NDD       G+Y     Y A+   V  +EE+GY  ++  +   + ++   H        
Sbjct: 340 NDDATINEHGGKYAGMDRYEARKAIVADLEEQGYLVKIEDHTHNVGTHDRCHTTVEPLIK 399

Query: 186 ---FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221
              F+   E     I+ +K+G                   ++D  +SR+ + WG +IP  
Sbjct: 400 QQWFVKMEELAKPAINALKTGELKFVPERFDKIYLHWLENIRDWCISRQIW-WGHRIPAY 458

Query: 222 ------------DDPQYIMYV--------------WIDALTNYLTTTGYLDNPDGSKA-- 253
                       + P+   +               W  +     +T G+   PD ++   
Sbjct: 459 YCDECGEFVVAREMPEVCPHCGCTHFTQDEDTLDTWFSSALWPFSTLGW---PDSTEELD 515

Query: 254 KFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
            F+P D+ V G DI+ F  I   + AF  +   P    VF HG +   +G K+SKSLGN 
Sbjct: 516 YFYPTDVLVTGYDIIFFWVIRMVFSAFAHTGKSPF-HTVFIHGLVRDSQGRKMSKSLGNG 574

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           IDP+EVIE+ G DALR  LV   A G D  FYD+   +   N + AN + N  SR + M 
Sbjct: 575 IDPLEVIEQYGADALRMTLVTGNAPGNDMRFYDE---RVEANRNFANKVWN-ASRFILMN 630

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           ++D     P  G  T +D+ ILS  + + +++ ENM    +  AL +V   + +   D Y
Sbjct: 631 MEDKTITTPDLGELTPTDKWILSKVNTLAKDVTENMDKFELGIALQKVYDFIWDEFCDWY 690

Query: 428 FDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            +  K + +   + D   A+  L+    V+     LL  F+P ++ +I+  L   +E+  
Sbjct: 691 IELAK-YRMYHADEDAKAANATLWTLKTVLANGLKLLHPFMPFVSEEIYSALVPEEESLM 749

Query: 486 FQSLDQ 491
             +  Q
Sbjct: 750 MSTWPQ 755


>gi|228917670|ref|ZP_04081211.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228841907|gb|EEM87013.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 288

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 18/281 (6%)

Query: 235 LTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIYWPAFLLS-ANLPLPKK 289
           +T Y + + +     G   + FW ++    +V GKD + FH++ WPA LL      +P+ 
Sbjct: 1   MTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFHSVIWPAVLLGIGEGAIPRH 60

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + S+ ++  +  K+S S    +   +++E    D++RYFL       +D  +        
Sbjct: 61  IVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAPENRDTDFSWREFIYS 120

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N++L    GN V+R++  I K Y G++P      E  + I     R+ + + E ++   
Sbjct: 121 HNSELLGAYGNFVNRTLKFIEKYYGGIMPKGSIDVELKDKI----ERLYKHVGEAIEQTK 176

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I   A LL+ F+P  
Sbjct: 177 FKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYLIANFANLLEPFLPFS 236

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +I + L + + N          +P   L    D + P F
Sbjct: 237 SERIRNTLSIVNRN---------WEPQHTLPSRIDSVQPLF 268


>gi|302918143|ref|XP_003052595.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733535|gb|EEU46882.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 666

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 123/545 (22%), Positives = 220/545 (40%), Gaps = 75/545 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ R  G + ++  G+DE+G      A
Sbjct: 13  KRNILITSALPYVNNIPHLGNIIGSVLSADVFARYCRARGHNTIYICGSDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRI---LWKK------ 112
              G++      +     + + D   I +D F RT T+++     +I   LWK       
Sbjct: 73  LEEGLSPADLCAKYHALHKGVYDWFRIDFDIFGRTPTDQQTQIVQQIFSDLWKNGLIEER 132

Query: 113 ---------------------------------ISDKGDIYKGCYSGWYSLRDEAYYNDD 139
                                              D+ D   G    +   R+ +  +DD
Sbjct: 133 ETTQPFCADPAHCKFLADRFVEGECSICHDLGARGDQCDACGGLLDPFEPEREPSNDDDD 192

Query: 140 EVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRN 194
            V   A G   N +        +    +  + RL A +D L+ ++ +S  E        +
Sbjct: 193 HVEAKATGWLINPRCKVDGTAPEKRRTKHLYLRLDAIKDLLVPWFHKSSKEGDWSANCIS 252

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLTTTGYL 245
              +++  GL    ++R    WG+ IP       D +Y   + YVW DA   Y++ T  L
Sbjct: 253 ITQAWIDKGLLPRGITRD-LKWGVPIPKGLDGLSDEEYAEKVFYVWFDACIGYVSITKNL 311

Query: 246 DNP---DGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHG 294
            +P   DG+  + W   P ++ +   +GKD + FH I +PA  L    N     K+ +  
Sbjct: 312 TDPGNLDGTNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTGENWTKVHKMSTTE 371

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           ++ ++G K SKS G  +      +E GV  D  RY+L+       D  +         N 
Sbjct: 372 YLNYEGGKFSKSRGVGVFG-NTAKETGVDPDVWRYYLLSRRPETADSEFKWPEFIDANNN 430

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIH 411
           DL   +GNL  R +       DG++P    +T E  E+     +  LQ          + 
Sbjct: 431 DLLKNLGNLNQRILKFCQAKLDGVVPDYTKYTDERLEAHKKEVNEALQTYITQFDAIKLR 490

Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             LA V+ + +  ++   D++   +L    PDR + V+ + +  ++ LA ++  ++P   
Sbjct: 491 AGLATVMHISALGNKLLQDSKLNNQLLAEEPDRCAAVIGLGINHLQLLASIIHPYMPSTG 550

Query: 471 NKIFD 475
             I +
Sbjct: 551 EAILE 555


>gi|226290706|gb|EEH46190.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 637

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 238/562 (42%), Gaps = 80/562 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKI 58
           +K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   LF  GTDE+G   
Sbjct: 10  VKGQRNILITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLFVCGTDEYGTAT 65

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A   GVT +    + ++  +D+ +  +I +D F RT   +H    + ++K++ + G 
Sbjct: 66  ETKALEEGVTPEELCAKYNKIHQDVYEWFEIGFDIFGRTPTAQHTQISQNIFKRLHENGF 125

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWME 161
           + +      +  + +++  D  V        Y  A G Q     H        NP   ++
Sbjct: 126 LEEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLD 185

Query: 162 EEGYFFRLSAYQDKLLSYYESH-PEFILP-IERRN-----EVI--SFVKSGLKDLSLSRK 212
                 R + +   LL   +    E++ P IE+ N      VI  S++K GLKD  ++R 
Sbjct: 186 GATPVRRPTKHIHLLLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD 245

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IG 264
              WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +G
Sbjct: 246 -LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLG 300

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH++ +P   +       K   + +  ++ ++  K SKS G  V         + 
Sbjct: 301 KDNVPFHSVIFPGTQIGTRDKWTKLYHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIP 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y  ++P 
Sbjct: 361 PDVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
               TE  E  L   + +L++    M++  +   L   + +V               +  
Sbjct: 421 -FTVTEQFEPALEEITALLRQYISEMESVHLRAGLVTAMKIV---------------EPP 464

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR------- 492
           +P+    V+ + V +I  ++ +   ++P  +  I   L V   N    SLD++       
Sbjct: 465 SPNAQPPVVGIVVNLIYLISSIFSPYLPATSASILAQLNVPFRN--IPSLDEQKEVGWRA 522

Query: 493 --LKPGFMLHKT---FDPIFPR 509
             +KPG  + K    F  I P+
Sbjct: 523 DLIKPGHKIGKAKYLFSQIDPK 544


>gi|70926115|ref|XP_735646.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56509492|emb|CAH86895.1| hypothetical protein PC302210.00.0 [Plasmodium chabaudi chabaudi]
          Length = 231

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 14/220 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           K W   + VIGKDIL+FH I +   L S  + +P+ +  HG I  +  KISKSL N++ P
Sbjct: 13  KLWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKIENIKISKSLNNIVSP 72

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR----VNADLANGIGNLVSRSVSMI 369
             ++E+   D +R + +     G    Y+    K+         L N +GNL+ R+VS+ 
Sbjct: 73  FTLLEKYDKDVIRLYFI-----GSGNIYEDKNFKESNLETFELFLRNSVGNLLYRTVSLC 127

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           +++   +I     F  +  +        L ++ ENM+  L+   L +++ LV ++++YF 
Sbjct: 128 IENNYKIIKKHYLFNFTILNEFKSDKTNLIKLFENMEYPLL---LEKLMILVKKINKYFV 184

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
             +PW  K  +    + ++Y T E I+  +I +  F+P +
Sbjct: 185 HNEPWN-KLNDSKNFNLIIYETFECIK-FSIFMNPFIPNI 222


>gi|289616526|emb|CBI56691.1| unnamed protein product [Sordaria macrospora]
          Length = 671

 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 210/534 (39%), Gaps = 63/534 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +E + I++A+ Y N  PH+G+    ++ ADV ARF R  GL  L+  G+DE+G      A
Sbjct: 14  KENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTLYVCGSDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR----ILWKK--ISDK 116
            + GV       +     +D+ D   IS+D F RT    H    +     LWK   I ++
Sbjct: 74  LSEGVDPATLCAKYHALHKDVYDWFRISFDKFGRTPTDEHTGITQEIFAQLWKNGFIEER 133

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVY----KGADGQYYNAQHNPVQWMEEE--------- 163
                 C    ++      Y + E       GA G   +A  N +  M+ +         
Sbjct: 134 ETTQAFCAVPEHNTFLADRYVEGECSICHDLGARGDQCDACGNLLDPMQPDKNAAGEDES 193

Query: 164 ---GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKD--LSLSRKTF 214
              G+        D             + ++  N+ I+     V++G     ++++R   
Sbjct: 194 KGTGWLINPRCKLDGSTPERRKTKHLYIRLDELNKEITAWLDRVENGWSANCVAITRSWI 253

Query: 215 DWGIKIP-----------------DDPQY---IMYVWIDALTNYLT-TTGYLD--NPDGS 251
           + G+K P                  D +Y   + YVW DA   Y + T  Y D  N +G 
Sbjct: 254 NNGLKPPWYHERSQVGFPKGLEGLSDEEYANKVFYVWFDACIGYASITKCYTDEGNLEGR 313

Query: 252 KAKFW---PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKI 303
             + W   P ++     +GKD + FH I +P   L       +   + +  ++ ++G K 
Sbjct: 314 NWEKWWKNPNNVTLYQFMGKDNVPFHTIIFPGTQLGTKEKWTQVNHLSTTEYLNYEGGKF 373

Query: 304 SKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           SKS G  V         +  D  RY+L+       D  +  +      N DL   +GNL 
Sbjct: 374 SKSKGVGVFGNNARDTGIDPDVWRYYLLSRRPESGDSEFKWEEFIDSNNNDLLKNLGNLC 433

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            R V       D  +P  P     S +      +++L+E  E ++   +   LA V+S+ 
Sbjct: 434 QRVVKFCQAKLDAKVPAYPATPIASLDEYKEEINKLLKEYNEQVKGTKLRAGLATVLSIS 493

Query: 422 SEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++   D +   +L    P+R + V+   + ++  +A +L  ++P  A  I 
Sbjct: 494 GVGNKLLQDNKLSNQLLTEEPERCNAVINFALNLLHLIAGVLTPYMPGTAQSIL 547


>gi|225569430|ref|ZP_03778455.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
 gi|225161638|gb|EEG74257.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
          Length = 885

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 16/238 (6%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +  +   P    VF HG +    G K+SKSLGN I
Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKSPF-HTVFIHGLVRDSLGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+E+IE+ G DALR  LV   A G D  FY+     +RV A  + AN + N  SR + M
Sbjct: 535 DPLEIIEQYGADALRMTLVTGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFILM 588

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            ++  +   P        D  ILS C+R+++E+ ENM    +  AL +V   + +   D 
Sbjct: 589 NIEGKEITEPEASELLPGDRWILSKCNRLIREMTENMDKFELGIALQKVYDFIWDEFCDW 648

Query: 427 YFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y + A++     +  P+ A+  L+V   V++    LL  F+P ++ +I+  L   +E+
Sbjct: 649 YIEIAKQRIYRAEEEPESANAALWVLKTVLKDALKLLHPFMPFVSEEIYGKLVPEEES 706



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R +   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 33 DRSRKPFTTVMPPPNITGRLHMGHALDNTLQDILIRYKRMQGYNALWIPGTD 84


>gi|308235287|ref|ZP_07666024.1| methionyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 291

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 119/269 (44%), Gaps = 43/269 (15%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GV
Sbjct: 1   MNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKEGV 60

Query: 68  TTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY-- 124
           + +   ++ +R   +D+ D L +SYD F RTT   H    + ++++    G IYKG    
Sbjct: 61  SAQELANRYNRVITKDLCD-LGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQKV 119

Query: 125 ----SGWYSLRDEAYYNDDEVYKGADGQYYNAQH------------NPV--------QWM 160
               S   +L D  Y        GADG   +               NPV        ++ 
Sbjct: 120 AISPSTGRTLPDR-YIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 178

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
           E E YF  L A  D  LS+  S   +      R  VI+F     K++     T   DWGI
Sbjct: 179 ETEHYFLDLPALADANLSWLNSRDGW------RTNVINFSIGLFKEVKPRAITRDIDWGI 232

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTT 242
            +P     D+P   +YVW DA+  YL+ +
Sbjct: 233 PVPVEGWVDNPNKRLYVWFDAVIGYLSAS 261


>gi|71018895|ref|XP_759678.1| hypothetical protein UM03531.1 [Ustilago maydis 521]
 gi|46099436|gb|EAK84669.1| hypothetical protein UM03531.1 [Ustilago maydis 521]
          Length = 834

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 127/541 (23%), Positives = 223/541 (41%), Gaps = 85/541 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++A+ Y N  PH+G+     + ADV AR+ R    + L+  GTDE+G      A   
Sbjct: 151 ILVTSALPYVNNVPHLGNIIGSTLSADVYARYSRTRNRNTLYICGTDEYGTATETKALED 210

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+       + +   I +D F RTT  +  +  + ++ K+   G + +   +
Sbjct: 211 GVTPQELCDKYHAQHAQVYEWFQIGFDHFGRTTTPKQTEIAQDVFLKLYKNGYLEERTMT 270

Query: 126 GWYSLRDEAYYNDDEVYK-----GAD----------GQYYNA-----------QHNPVQW 159
             +  +   +  D  V       G D          GQ Y+A              PVQ 
Sbjct: 271 QLFCQKCVRFLADRYVEGECPRCGYDDARGDQCDKCGQLYDAVELVKPRCKLCSSPPVQ- 329

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWG 217
            +    F R+   Q  L   +              ++I  S+ K GLK  SL+R    WG
Sbjct: 330 KDSSHMFIRIDELQ-PLTEKWAREQAQKGGWSSNGKLITESWFKEGLKPFSLTRD-LKWG 387

Query: 218 IKIP--DDPQYIMYVWIDALTNYLT-TTGYLD-------NPDGSKAKFWPADLHVIGKDI 267
           + +P       ++YVW DA   Y + T  Y D       NPD  K          +GKD 
Sbjct: 388 VPVPIKGMEDKVLYVWFDAPIGYPSITANYTDDWEKWWKNPDNVKL------YQFMGKDN 441

Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
           +RFH + +P+ L+ +  P  L   + +  ++ ++G K SKS  N+    +   ++G+ A 
Sbjct: 442 VRFHTVIFPSCLIGSKDPYTLLHHINTTEYLQYEGGKFSKSR-NIGVFGDKARDLGLSAS 500

Query: 325 -LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             RY+L+       D  +       R N++L   +GN  +R V   +K YD +IP   + 
Sbjct: 501 VWRYYLLANRPETADSQFAWRDFIARNNSELLANLGNFCNR-VLTFMKKYDYVIPAIPSD 559

Query: 384 TE------------------SDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLV 421
           ++                  +  S++S  +R    +L +   +M+   I   L  +++L 
Sbjct: 560 SKLRSYKDGPVAAAAEGADDASSSVISRFARDVNLILGQYISSMEAVKIRSGLQHMMALS 619

Query: 422 SE-----VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +      V+ +FD      L   +  R   V+ V + +I  L+ L+  F+P+ ++ I   
Sbjct: 620 ARGNLFLVESHFDNT----LFTESRARCDEVMIVALNLIWLLSALIHPFMPETSDAILKQ 675

Query: 477 L 477
           L
Sbjct: 676 L 676


>gi|254520461|ref|ZP_05132517.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914210|gb|EEH99411.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 358

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 155/359 (43%), Gaps = 45/359 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +  A  Y N   H+G    ++  D++AR+HRL G +V+F +GTD HG  +   A+  G+T
Sbjct: 5   VGNAWPYANGPLHLGRIAVLLPGDIIARYHRLMGDEVVFLSGTDCHGTPVTMKAKEEGIT 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                 +    F+   D L  S+D F +T    H +  +    ++ + G IY+      Y
Sbjct: 65  PLEATIKYHDEFKRCFDSLGFSFDVFEKTHSDYHEEKVKKFILELYNNGYIYEKEIEQTY 124

Query: 129 SLRDEAYYND----------DEVYKGADGQY--------------YNAQHNPVQWMEEEG 164
                 + +D           E+  G   +                    N     E + 
Sbjct: 125 CENCHEFLSDRYIEGKCPHCGEIVSGDQCESCLEIIDSEELLDKRCKLCGNETILKETKH 184

Query: 165 YFFRLSAYQD---KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            FF LS++++   +LL   +   E    I +R     ++  GL+D +++R  F+WG+ +P
Sbjct: 185 LFFSLSSFENDVRRLLIRQKGWRENAQKIVKR-----YLDEGLRDRAVTRD-FNWGVDVP 238

Query: 222 ----DDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD----LHVIGKDILRFHA 272
               DD +  ++VWI+A+  YLT +   L+  +    ++W  +      V GKD + FH 
Sbjct: 239 LEGYDDKK--IFVWIEAVMGYLTASMKCLEERNEDWKEYWQGEDSRVYFVHGKDNIPFHT 296

Query: 273 IYWPAFLLSANLPLPK-KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + +PA L    +  P  +V S  ++  +G+  S      I    +++   VD  RY+L 
Sbjct: 297 VIFPAILAGIGIKNPNLRVISSEYMKLEGKNFSSVKNWAIWGDYIVDNYDVDEFRYYLA 355


>gi|134300393|ref|YP_001113889.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134053093|gb|ABO51064.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 879

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 27/264 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +     F+P  + V G+DI+ F    W A ++ + L  
Sbjct: 450 VLDTWFSSALWPFSTLGWPEKTE-ELEHFYPTSVLVTGRDIIFF----WVARMIFSGLRF 504

Query: 287 P-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338
                 K+VF HG +L   G K+SKSLGN +DP+++IE  G D+LR+ L+     G D  
Sbjct: 505 MEEEPFKEVFIHGLVLDSLGRKMSKSLGNGVDPLDIIESHGADSLRFMLITGNTPGNDLR 564

Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCS 395
             F   DG +     + AN + N  SR V M L DYD   PT   G +T +D  ILS   
Sbjct: 565 FHFERLDGAR-----NFANKLWN-ASRFVMMNLGDYD---PTSQGGQYTLADRWILSRLQ 615

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +++ + ++   +  A   +   + SE  D Y +  KP    KT P+   T  +V V+
Sbjct: 616 GTAKDVTDFLERYELGEAARVLYEFIWSEFCDWYIELAKPRLFGKTTPEDRVTAQHVLVQ 675

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+RQ+  +L  F+P +  +I+  L
Sbjct: 676 VLRQVLEMLHPFMPFITEEIWQKL 699



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIA 59
           E++K      +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD  G    A
Sbjct: 34  EKDKTPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWRRMQGYNALWIPGTDHAGIATQA 93

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           K  +      +   D     F +        Y + I TT+ RH
Sbjct: 94  KVEEQLAKECQSKYDLGREKFLERVWAWKEQYGNRI-TTQLRH 135


>gi|125972845|ref|YP_001036755.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125713070|gb|ABN51562.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 884

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 19/274 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP   +  W  +     +T G+ D  +  K  F+P D+ V G DI+ F    W A 
Sbjct: 443 RIEQDPD-TLDTWFSSALWPFSTLGWPDETEDLKY-FYPTDVLVTGYDIIFF----WVAR 496

Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + L    K     VF HG +    G K+SKSLGN IDP+E+I++ G DALR+ L   
Sbjct: 497 MIFSALEHTGKEPFKYVFIHGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESIL 391
            + G D  + ++  K   + + AN I N  SR V M   D  D     P  FT SD+ IL
Sbjct: 557 TSPGNDLRFSEE--KAESSRNFANKIWN-ASRFVLMNFDDNLDFSKVDPNKFTTSDKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + + +E+ ENM+   +  AL ++   + E   D Y +  KP    K +  R     Y
Sbjct: 614 SRVNNLTREVTENMEKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QY 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V   V+     LL  ++P +  +I+  L V DE+
Sbjct: 673 VLNYVLGTAMKLLHPYMPFITEEIYRHLVVDDES 706



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++EK   +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        
Sbjct: 34  DKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEA 93

Query: 57  KIAKAAQNAGVT 68
           KI +A    G+T
Sbjct: 94  KIVEAMAKEGIT 105


>gi|256005887|ref|ZP_05430834.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990156|gb|EEU00291.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316940919|gb|ADU74953.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 884

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 19/274 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP   +  W  +     +T G+ D  +  K  F+P D+ V G DI+ F    W A 
Sbjct: 443 RIEQDPD-TLDTWFSSALWPFSTLGWPDETEDLKY-FYPTDVLVTGYDIIFF----WVAR 496

Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + L    K     VF HG +    G K+SKSLGN IDP+E+I++ G DALR+ L   
Sbjct: 497 MIFSALEHTGKEPFKYVFIHGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESIL 391
            + G D  + ++  K   + + AN I N  SR V M   D  D     P  FT SD+ IL
Sbjct: 557 TSPGNDLRFSEE--KAESSRNFANKIWN-ASRFVLMNFDDNLDFSKVDPNKFTTSDKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + + +E+ ENM+   +  AL ++   + E   D Y +  KP    K +  R     Y
Sbjct: 614 SRVNNLTREVTENMEKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QY 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V   V+     LL  ++P +  +I+  L V DE+
Sbjct: 673 VLNYVLGTAMKLLHPYMPFITEEIYRHLVVDDES 706



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++EK   +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        
Sbjct: 34  DKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEA 93

Query: 57  KIAKAAQNAGVT 68
           KI +A    G+T
Sbjct: 94  KIVEAMAKEGIT 105


>gi|260825349|ref|XP_002607629.1| hypothetical protein BRAFLDRAFT_123956 [Branchiostoma floridae]
 gi|229292977|gb|EEN63639.1| hypothetical protein BRAFLDRAFT_123956 [Branchiostoma floridae]
          Length = 784

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 40/333 (12%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+V+ GLK   ++R    WG  +P +   + + YVW DA   YL+ T  Y D  +    K
Sbjct: 361 SWVRDGLKPRCITRD-LKWGTPVPLEGFTEKVFYVWFDAPIGYLSITANYTDQWE----K 415

Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307
           +W     V     + KD + FH++ +P  LL A  N  L   + +  ++ ++  K SKS 
Sbjct: 416 WWKNPQQVTLYNFMAKDNVPFHSVVFPCSLLGAEDNYTLVNHLQATEYLNYEDGKFSKSR 475

Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  V         +  D  R++L+      +D  +  +    + N++L N +GN V+R++
Sbjct: 476 GVGVFGNNAKDTGIPADIYRFYLLFVRPESQDSTFSWEDFMTKNNSELLNNLGNFVNRAL 535

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS---- 422
             +   + G+IP     TE D  +L+  +R LQ             A  Q +  VS    
Sbjct: 536 MFVSNFFQGVIPAVDV-TEDDGQLLAQVNRELQ-------------AFIQCLEKVSWGGV 581

Query: 423 -EVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++Y   QKPW L K NP    RA TV+ +   V   L++++Q ++P  +N I   L 
Sbjct: 582 GGGNQYIQGQKPWVLVKGNPGEKARAGTVIGLAANVACLLSVMVQPYMPATSNTIQQQLQ 641

Query: 479 V-ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             A+ N    +   RL+ G  + K   P+F + 
Sbjct: 642 APAEVNILTDTFVCRLQAGHKIGKP-SPLFQKI 673


>gi|313893131|ref|ZP_07826708.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442484|gb|EFR60899.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 885

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 129/266 (48%), Gaps = 14/266 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWP 276
           ++  DP  ++  W  +      T G+ D     K +++P  + V G DI+ F    + + 
Sbjct: 444 RVTQDPD-VLDTWFSSGLWPFATMGWPDQTPELK-QWYPTSVLVTGYDIIFFWVARMIFM 501

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A      +P  K VF HG +   +G K+SKSLGN I+P++VI++ G DALR+ LV     
Sbjct: 502 ALEFEDEIPF-KHVFIHGLVRDSQGRKMSKSLGNGINPLDVIDQFGADALRFTLVTGNTP 560

Query: 336 GKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSV 393
           G D  FY +   +   N + AN I N  S+ V M L +YD   +PT    T +D+ I+  
Sbjct: 561 GNDMRFYME---RVEANRNFANKIWN-ASKFVLMNLTNYDESFVPTADDLTLADQWIIQK 616

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  +Q +  N+    +  A + V   +  +  D Y +  KP    ++N     TV Y+ 
Sbjct: 617 YNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESNERDRRTVQYLL 676

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           V ++R +  LL  F+P +   I+  L
Sbjct: 677 VTILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 23/123 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKA----------- 61
           H+GHA +  + D+L RF R+ G +VL+  GTD  G        + +AK            
Sbjct: 54  HMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGRE 113

Query: 62  --AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              +      K + D   +  R +    D + + F  T +  ++   R ++ K+ +KG I
Sbjct: 114 KFVERVWEWKKEYGDTIVKQIRSLGASCDWTRERF--TLDDGYYHAVREVFVKLYEKGLI 171

Query: 120 YKG 122
           Y+G
Sbjct: 172 YRG 174


>gi|281417043|ref|ZP_06248063.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281408445|gb|EFB38703.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 875

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 19/274 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP   +  W  +     +T G+ D  +  K  F+P D+ V G DI+ F    W A 
Sbjct: 434 RIEQDPD-TLDTWFSSALWPFSTLGWPDETEDLKY-FYPTDVLVTGYDIIFF----WVAR 487

Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + L    K     VF HG +    G K+SKSLGN IDP+E+I++ G DALR+ L   
Sbjct: 488 MIFSALEHTGKEPFKYVFIHGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIG 547

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESIL 391
            + G D  + ++  K   + + AN I N  SR V M   D  D     P  FT SD+ IL
Sbjct: 548 TSPGNDLRFSEE--KAESSRNFANKIWN-ASRFVLMNFDDNLDFSKVDPNKFTTSDKWIL 604

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + + +E+ ENM+   +  AL ++   + E   D Y +  KP    K +  R     Y
Sbjct: 605 SRVNNLTREVTENMEKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QY 663

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V   V+     LL  ++P +  +I+  L V DE+
Sbjct: 664 VLNYVLGTAMKLLHPYMPFITEEIYRHLVVDDES 697



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
          ++EK   +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        
Sbjct: 25 DKEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEA 84

Query: 57 KIAKAAQNAGVT 68
          KI +A    G+T
Sbjct: 85 KIVEAMAKEGIT 96


>gi|90019097|gb|ABD84202.1| methionyl-tRNA synthetase-like [Yersinia sp. MH-1]
          Length = 276

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 30/263 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  + + S+  +       ISYD++  T    + +   ++++++ + G I     
Sbjct: 66  LGVEPEQMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYRRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKG------ADGQY------YNAQHNPVQWM------------ 160
           S  Y   ++  +  D   KG      A  QY        A ++P + +            
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSAVSGATPV 184

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A+ + L ++  S     L  +  N++  +  SGL+   +SR    +G 
Sbjct: 185 MRESEHFFFDLPAFSEMLQAWTRSG---ALQEQVANKMQEWFDSGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTT 241
           ++PD P    YVW+DA   Y+ +
Sbjct: 242 EVPDAPGKYFYVWLDAPIGYMGS 264


>gi|319411893|emb|CBQ73936.1| probable MES1-methionyl-tRNA synthetase [Sporisorium reilianum]
          Length = 735

 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 222/541 (41%), Gaps = 85/541 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++A+ Y N  PH+G+     + ADV AR+ R    + L+  GTDE+G      A   
Sbjct: 47  ILVTSALPYVNNVPHLGNIIGSTLSADVYARYSRSRNRNTLYICGTDEYGTATETKALED 106

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+      ++     I +D F RTT  +  +  + ++ K+ + G + +   +
Sbjct: 107 GVTPQQLCDKYHALHAEVYQWFQIGFDHFGRTTTPKQTEIAQDIFLKLHENGYLEERTMT 166

Query: 126 GWYSLRDEAYYNDDEVYK-----GAD----------GQYYNA-----------QHNPVQW 159
             +      +  D  V       G D          GQ Y+A              PVQ 
Sbjct: 167 QLFCQNCVRFLADRYVEGECPRCGYDDARGDQCDKCGQLYDAVELVKPRCKLCSSPPVQ- 225

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWG 217
            +    F R+   Q  L   +              ++I  S+ K GLK  SL+R    WG
Sbjct: 226 KDSRHMFIRIDELQ-PLTEKWAREQAQKGGWSSNGKLITESWFKEGLKPFSLTRD-LKWG 283

Query: 218 IKIP--DDPQYIMYVWIDALTNYLT-TTGYLD-------NPDGSKAKFWPADLHVIGKDI 267
           + +P       ++YVW DA   Y + T  Y D       NPD  K          +GKD 
Sbjct: 284 VPVPIKGMEDKVLYVWFDAPIGYPSITANYTDDWQKWWKNPDNVKL------YQFMGKDN 337

Query: 268 LRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
           +RFH + +P+ L+ +  P  L   + +  ++ ++G K SKS  N+    +   ++G+ A 
Sbjct: 338 VRFHTVIFPSCLIGSKDPYTLLHHINTTEYLQYEGGKFSKSR-NIGVFGDKARDLGLSAS 396

Query: 325 -LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             RY+L+       D  +       R N++L   +GN  +R V   +K YD ++P   A 
Sbjct: 397 VWRYYLLANRPETADSQFAWRDFIARNNSELLANLGNFCNR-VLTFMKKYDYVLPAIPAD 455

Query: 384 TE------------------SDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLV 421
           +E                  +  S++S  +R    +L +    M+   I   L  +++L 
Sbjct: 456 SELHSYKQGAVAAAADGADDASSSVISRFARDVNAILGQYISAMEAVKIRSGLQHMMALS 515

Query: 422 SE-----VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +      V+ +FD      L   +  R   V+ V + +I  L+ L+  F+P+ ++ I   
Sbjct: 516 ARGNVFLVESHFDNT----LFTESRARCDEVMIVALNLIWLLSALIHPFMPETSDAILKQ 571

Query: 477 L 477
           L
Sbjct: 572 L 572


>gi|323703627|ref|ZP_08115270.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531399|gb|EGB21295.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 882

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 26/273 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G K+  DP  ++  W  +     +T G+ +        F+P  + V G+DI+ F    W 
Sbjct: 444 GGKMEQDPD-VLDTWFSSALWPFSTLGWPEK-TAELEHFYPTSVLVTGRDIIFF----WV 497

Query: 277 AFLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A ++ + +      P  K+VF HG +L  +G K+SKSLGN +DP+EVI+  G D+LR+ L
Sbjct: 498 ARMIFSGMYNMHEEPF-KEVFIHGLVLDAQGRKMSKSLGNGVDPLEVIDSHGADSLRFML 556

Query: 330 VREIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +     G D    F   DG +       AN + N  SR V M L DYD      G +T +
Sbjct: 557 ITGNTPGNDLRFHFERLDGAR-----SFANKLWN-ASRFVMMNLTDYDPAA-QGGPYTLA 609

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRA 444
           D  ILS     + ++ + ++   +  A   +   + SE  D Y +  KP    KT P+  
Sbjct: 610 DRWILSRLQGTVADVTDFLERYELGEAARVLYDFIWSEFCDWYIELAKPRLFGKTTPEDR 669

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            T   V V+V+R+   LL  F+P +  +I+  L
Sbjct: 670 ITTQQVLVQVLRKTLELLHPFMPFITEEIWQKL 702



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 9/110 (8%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           E++K      +  PN   Q H+GHA +  + D+L R+ R+ G + ++  GTD  G     
Sbjct: 37  EKDKKPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWRRMQGYNAMWVPGTDHAGIATQA 96

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           K+ +     G+T     D     F +        Y + I T  +R   +C
Sbjct: 97  KVEEQLAKEGLTK---YDLGREKFLERVWAWKEQYGNRITTQLRRLGASC 143


>gi|282850551|ref|ZP_06259930.1| valine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580044|gb|EFB85448.1| valine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 885

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 10/230 (4%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311
           +++P  + V G DI+ F         L     +P K VF HG +   +G K+SKSLGN I
Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGHKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +P+EVI++ G DALR+ LV     G D  FY +   +   N + AN I N  S+ V M L
Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427
            +YD   +PT    T SD+ I+   +  +Q +  N+    +  A + V   +  +  D Y
Sbjct: 593 TNYDESFVPTADDLTLSDQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  KP    ++N     TV Y+ V ++R +  LL  F+P +   I+  L
Sbjct: 653 IELAKPRLYSESNERDRRTVQYLLVIILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA +  + D+L RF R+ G +VL+  GTD           +AG+ T++ V++
Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97


>gi|294794041|ref|ZP_06759178.1| valine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455611|gb|EFG23983.1| valine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 885

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 10/230 (4%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311
           +++P  + V G DI+ F         L     +P K VF HG +   +G K+SKSLGN I
Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +P+EVI++ G DALR+ LV     G D  FY +   +   N + AN I N  S+ V M L
Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427
            +YD   +PT    T +D+ I+   +  +Q +  N+    +  A + V   +  +  D Y
Sbjct: 593 TNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  KP    ++N     TV Y+ V ++R +  LL  F+P +   I+  L
Sbjct: 653 IELAKPRLYSESNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA +  + D+L RF R+ G +VL+  GTD           +AG+ T++ V++
Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97


>gi|269798312|ref|YP_003312212.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094941|gb|ACZ24932.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 885

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 10/230 (4%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311
           +++P  + V G DI+ F         L     +P K VF HG +   +G K+SKSLGN I
Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +P+EVI++ G DALR+ LV     G D  FY +   +   N + AN I N  S+ V M L
Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427
            +YD   +PT    T +D+ I+   +  +Q +  N+    +  A + V   +  +  D Y
Sbjct: 593 TNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  KP    ++N     TV Y+ V ++R +  LL  F+P +   I+  L
Sbjct: 653 IELAKPRLYSESNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA +  + D+L RF R+ G +VL+  GTD           +AG+ T++ V++
Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97


>gi|46128473|ref|XP_388790.1| hypothetical protein FG08614.1 [Gibberella zeae PH-1]
          Length = 673

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 119/545 (21%), Positives = 219/545 (40%), Gaps = 75/545 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + +++A+ Y N  PH+G+    ++ ADV +R+ +  G + ++  G+DE+G      A
Sbjct: 13  KRNILVTSALPYVNNIPHLGNIIGSVLSADVFSRYCKARGYNTIYICGSDEYGTATETKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---------------------EKR 101
              G++      +     + + D   I +D F RT                      E+R
Sbjct: 73  LEEGLSPADLCAKYHALHKGVYDWFRIDFDIFGRTPTQQQTQIVQQIFKELWKNGYIEER 132

Query: 102 --------HHDTCRILWKKI--------------SDKGDIYKGCYSGWYSLRDEAYYNDD 139
                   H +  + L  +                D+ D   G    +   R+ +   DD
Sbjct: 133 ETTQPFCTHANHGKFLADRFVEGECSICHDLGARGDQCDACGGLLDPFEPEREPSASEDD 192

Query: 140 EVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRN 194
            V   A G   N +        +  + +  F RL A +D L+ ++ +S  E        +
Sbjct: 193 HVEAKATGFLINPRCKVDGTTPEKRKTKHLFLRLDAVKDLLVPWFHKSSKEGDWSANCIS 252

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYL 245
              S++  GL    ++R    WG+ IP D          + + YVW DA   Y++ T  L
Sbjct: 253 ITQSWIDKGLLPRGITRD-LKWGVPIPQDLEGLSNEEYAEKVFYVWFDACIGYVSITKNL 311

Query: 246 ---DNPDGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHG 294
              DN DG+  + W   P ++ +   +GKD + FH I +PA  L    N     K+ +  
Sbjct: 312 VDGDNLDGTNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTGENWTKVHKMSTTE 371

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           ++ ++G K SKS G  +      +E GV  D  RY+L+       D  +         N 
Sbjct: 372 YLNYEGGKFSKSRGVGVFG-NTAKETGVDPDVWRYYLLSRRPETADSEFKWQEFIDCNNN 430

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIH 411
           DL   +GNL  R +       DG++P    +T E  E      +  L+          + 
Sbjct: 431 DLLKNLGNLNQRILKFAQLKLDGVVPDYTKYTDERLEEHKKEVNEALKTFIAQFDAIKLR 490

Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             LA V+ + +  ++   D++   +L    P+R + V+ + +  ++ LA ++  ++P  +
Sbjct: 491 AGLASVMHISALGNKLLQDSKLNNQLLAEEPERCAAVIGLGINHLQLLASIVYPYMPSTS 550

Query: 471 NKIFD 475
           + I +
Sbjct: 551 DAILE 555


>gi|240274148|gb|EER37666.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 616

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 234/544 (43%), Gaps = 59/544 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLAR--FHRLDGLDVLFTTGTDEHGQKIA 59
           K +  + I++A+ Y N  PH+G+    I+  VL+   + +  G   L+  GTDE+G    
Sbjct: 11  KGQRNVLITSALPYVNNVPHLGN----IVGSVLSADVYQKACGRPTLYICGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWMEE 162
            +      +  + +++  D  V        Y  A G Q     H        NP   ++ 
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 163 EGYFFRLSAY----QDKLLSYYES--HPEFI---LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +     DKL    E+  HP       P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PADLHV---IGK 265
             WG+ +P D   + ++YVW +A   Y + T     PD    + W   P ++ +   +GK
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANY-TPD---WELWWRDPDNVQLYQFLGK 301

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 302 DNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPA 361

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTP 380
           D  RY+L++      D  ++        N +L   +GNLV+R V +I   K Y   +P  
Sbjct: 362 DVWRYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPD- 420

Query: 381 GAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437
             FT  E  + +L   + +L++    M+   +   +A  + +V   +    + K    L 
Sbjct: 421 --FTVPEPFKPVLGEVTTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLI 478

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
            + P+RA++V+ + ++ +    + +    P+ A+  F  +   DE +        +KPG 
Sbjct: 479 ASEPERAASVVGIHLQPVPAGHVSVD---PRTAHVPFANIPSLDELKDEGWKPALIKPGH 535

Query: 498 MLHK 501
            + K
Sbjct: 536 QIGK 539


>gi|270013434|gb|EFA09882.1| hypothetical protein TcasGA2_TC012030 [Tribolium castaneum]
          Length = 232

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 14/196 (7%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  NV+ P +  E    D LRYFL+RE     DG Y    + + +N++LA+ +GNL+
Sbjct: 1   MSKSKNNVVCPFQRSEIYSSDGLRYFLLREGVAHSDGNYSDTKVIRILNSELADTLGNLL 60

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRE-------NMQNQLIHRA 413
           SR     L  +      P     + ES+ S  V  ++++++         +  N   ++A
Sbjct: 61  SRCCGTALNPHQTF---PKIEASAFESVASSDVTKKLIEDVATLPDVCMGHYSNFNFYKA 117

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + +VI+ + + + +F+  KPWELKK +        VL++T+E +R   ILLQ  +P +A+
Sbjct: 118 VDRVIATLHQANLFFETFKPWELKKESAKTRELDVVLHLTLETLRVCGILLQPIIPNIAS 177

Query: 472 KIFDILFVADENRCFQ 487
            + + + VA E R F 
Sbjct: 178 NLLNKINVARERRTFS 193


>gi|331092376|ref|ZP_08341202.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401400|gb|EGG80986.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 882

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 180/423 (42%), Gaps = 81/423 (19%)

Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE------ 185
           NDD       G+Y     Y A+   V  +E EGY  ++  +   + ++   H        
Sbjct: 299 NDDATINEHGGKYAGMERYEARKAIVADLEAEGYLVKIEEHTHNVGTHDRCHTTVEPLIK 358

Query: 186 ---FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221
              F+   E     I+ +K+G                   ++D  +SR+ + WG +IP  
Sbjct: 359 QQWFVKMEELAKPAINALKTGELKFVPERFNKTYLHWLENIRDWCISRQIW-WGHRIPAY 417

Query: 222 ------------DDPQYIMYV--------------WIDALTNYLTTTGYLDNPDGSKA-- 253
                       + P+   +               W  +     +T G+   PD ++   
Sbjct: 418 YCDECGEFVVAREMPEKCEHCGCTHFTQDEDTLDTWFSSALWPFSTLGW---PDSTEELD 474

Query: 254 KFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
            F+P D+ V G DI+ F  I   +  F  +   P    VF HG +   +G K+SKSLGN 
Sbjct: 475 YFYPTDVLVTGYDIIFFWVIRMVFSGFAHTGKSPF-HTVFIHGLVRDSQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           IDP+E+IE+ G DALR  LV   A G D  FYD+   +   N + AN + N  SR + M 
Sbjct: 534 IDPLEIIEQYGADALRMTLVTGNAPGNDMRFYDE---RVEANRNFANKVWN-ASRFIMMN 589

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +++ +   P+    T +D+ ILS  + + +++ ENM    +  AL +V   + +   D Y
Sbjct: 590 MEEKEITTPSESDLTATDKWILSKVNTLAKDVTENMDKFELGIALQKVYDFIWDEFCDWY 649

Query: 428 FDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            +  K + +   + D   A+  L+    V+     +L  ++P ++ +I+  L   +E+  
Sbjct: 650 IELAK-YRIYHADDDAVSANAALWTLKTVLANGLKMLHPYMPFVSEEIYSALVPEEESLM 708

Query: 486 FQS 488
             S
Sbjct: 709 MSS 711


>gi|238018913|ref|ZP_04599339.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748]
 gi|237864397|gb|EEP65687.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748]
          Length = 885

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 42/352 (11%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F  +    +  L   + H    +P       ++++++ ++D ++SR+ + WG +
Sbjct: 359 MVSKQWFVDMKPLAEPALKVVKDHEVEFVPERFTKTYVNWLEN-IRDWTISRQLW-WGHR 416

Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           IP                             DP  ++  W  +      T G+ +     
Sbjct: 417 IPAWYCDDCGETIVSREDINECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPEQTPEL 475

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGN 309
           K +++P  + V G DI+ F         L     +P K VF HG +   +G K+SKSLGN
Sbjct: 476 K-QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGN 534

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            I+P+EVI++ G DALR+ LV     G D  FY +   +   N + AN I N  S+ V M
Sbjct: 535 GINPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLM 590

Query: 369 ILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
            L +YD   +PT    T +D+ I+   +  +Q +  N+    +  A + V   +  +  D
Sbjct: 591 NLTNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCD 650

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP      N     TV Y+ V ++R +  LL  F+P +   I+  L
Sbjct: 651 WYIELAKPRLYNDGNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 23/123 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKA----------- 61
           H+GHA +  + D+L RF R+ G +VL+  GTD  G        + +AK            
Sbjct: 54  HMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGRE 113

Query: 62  --AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              +      K + D   +  R +    D S + F  T ++ ++   R ++  + +KG I
Sbjct: 114 KFVERVWEWKKEYGDTIVKQIRSLGASCDWSRERF--TLDEGYYHAVREVFVSLYEKGLI 171

Query: 120 YKG 122
           Y+G
Sbjct: 172 YRG 174


>gi|167759909|ref|ZP_02432036.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
 gi|167662528|gb|EDS06658.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
          Length = 883

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 182/418 (43%), Gaps = 81/418 (19%)

Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE------ 185
           NDD       G+Y     Y A+   V+ +EE+GY  ++  +   + ++   H        
Sbjct: 299 NDDATINENGGKYAGMERYEARKVMVKDLEEQGYLVKVVPHSHNVGTHDRCHTTVEPMVK 358

Query: 186 ---FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221
              F+   E     I  VK+G                   ++D  +SR+ + WG +IP  
Sbjct: 359 QQWFVRMEELAKPAIEAVKNGDLKFVPERFDKIYLHWLENIRDWCISRQIW-WGHRIPAY 417

Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                       D P+                +  W  +     +T G+ +  +     F
Sbjct: 418 YCDECGDIVVSCDVPEKCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEKTEDLDY-F 476

Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +P D+ V G DI+ F  I   +  +  +   P    VF HG +   +G K+SKSLGN ID
Sbjct: 477 YPTDVLVTGYDIIFFWVIRMVFSGYAHTGKTPF-HTVFIHGLVRDSQGRKMSKSLGNGID 535

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369
           P+E+IE+ G DALR  L+   A G D  FY+     +RV A  + AN + N  SR + M 
Sbjct: 536 PLEIIEQYGADALRMTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFIMMN 589

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           ++D +   P       +D  I+S C+ +++++ ENM    +  AL+++   + +   D Y
Sbjct: 590 IEDKEITEPADFKLRPADRWIMSKCNNLVKDVTENMDKYELGIALSKIYDFMWDEFCDWY 649

Query: 428 FDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K + +     D+  A+  ++   EV+++   LL  ++P ++ +I+  L   +E+
Sbjct: 650 IEIAK-YRIYHVEEDQKSANDAMWTLREVLKKSLKLLHPYMPFVSEEIYGKLVPEEES 706



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R +   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 33 DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWVPGTD 84


>gi|312898925|ref|ZP_07758313.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620087|gb|EFQ03659.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 887

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 128/269 (47%), Gaps = 22/269 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           I  DP  ++  W  +     +T G+ D  PD     F+P  + V G DI+ F    W A 
Sbjct: 447 IHQDPD-VLDTWFSSALWPFSTMGWPDKTPDLQH--FFPTSVLVTGYDIIFF----WVAR 499

Query: 279 LLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ A     K+V     F HG +   +G K+SKSLGN IDP+EV +  G DALR+ LV  
Sbjct: 500 MMFATCEFMKEVPFKDVFIHGLVRDSQGRKMSKSLGNGIDPLEVSDMYGADALRFTLVTG 559

Query: 333 IACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESI 390
              G D  FY +   +   N + AN I N  S+ V M L+DYD   +PT   FT +D  I
Sbjct: 560 NTPGNDMRFYME---RVEANRNFANKIWN-ASKFVIMNLEDYDPEFVPTTDDFTLADRWI 615

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
           L+  ++V++++ + + +  +  A A V      S  D Y +  K    K  +     T  
Sbjct: 616 LTSFNQVVRQVTKGLDSYELGDAAATVYDFTWNSFCDWYIELAKQRLYKSDDKRSRQTAQ 675

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           YV V V+     LL  F+P +   ++  L
Sbjct: 676 YVLVRVLTGALALLHPFMPFVTEHLWQHL 704



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  +  PN   Q H+GHA +  + D+L RF R+ G +V++  GTD           +AG+
Sbjct: 42 SIVMPPPNVTGQLHMGHALDNTLQDILIRFKRMSGYNVVWIPGTD-----------HAGI 90

Query: 68 TTKVFVDQN 76
           T+V V++ 
Sbjct: 91 ATQVKVEEQ 99


>gi|294792176|ref|ZP_06757324.1| valine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457406|gb|EFG25768.1| valine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 885

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 10/230 (4%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311
           +++P  + V G DI+ F         L     +P K VF HG +   +G K+SKSLGN I
Sbjct: 477 QWYPTSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +P+EVI++ G DALR+ LV     G D  FY +   +   N + AN I N  S+ V M L
Sbjct: 537 NPLEVIDQYGADALRFTLVTGNTPGNDMRFYME---RVEANRNFANKIWN-ASKFVLMNL 592

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY 427
            +YD   +PT    T +D+ I+   +  +Q +  N+    +  A + V   +  +  D Y
Sbjct: 593 TNYDESFVPTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWY 652

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  KP    +++     TV Y+ V ++R +  LL  F+P +   I+  L
Sbjct: 653 IELAKPRLYSESDERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA +  + D+L RF R+ G +VL+  GTD           +AG+ T++ V++
Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97


>gi|327277846|ref|XP_003223674.1| PREDICTED: LOW QUALITY PROTEIN: methionyl-tRNA synthetase,
           cytoplasmic-like [Anolis carolinensis]
          Length = 908

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 22/328 (6%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+++ GLK   ++R    WG  +P D     + YVW DA   YL+    Y D  +    K
Sbjct: 491 SWIRDGLKPRCITRD-LKWGTPVPLDGFRDKVFYVWFDAPIGYLSIAANYTDQWE----K 545

Query: 255 FW--PADLHV---IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSL 307
           +W  P  + +   + KD + FH++ +P  LL       L   + +  ++ ++  K SKS 
Sbjct: 546 WWKNPEQVQLYNFMAKDNVPFHSVVFPCTLLGTGDKYTLVNHLIATEYLNYEDGKFSKSR 605

Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  V   +     +  D  R++L+      +D  +    L  + N++L N +GN ++R+ 
Sbjct: 606 GVGVFGDMAKDTGIPSDIWRFYLLYLRPESQDSAFSWTDLMTKNNSELLNTLGNFINRAG 665

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S + K + G +P      + D+ +L+  +  L++    ++   I  AL  ++++    + 
Sbjct: 666 SFVCKFFGGHVPA-MELNQDDKRLLAHITLELRQYNYLLEKVKIREALRSILNMARHGNH 724

Query: 427 YFDAQKPWE-LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADE 482
           Y    +PW+ +K +  D  RA TV+ V V +   L+++LQ ++P ++  I   L + AD 
Sbjct: 725 YLQVNEPWKHIKGSEADKKRAGTVIGVAVNIASLLSVVLQPYMPNVSATIQQQLSIPADY 784

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           N         L  G  +  T  P+F + 
Sbjct: 785 NVVSNDFVCTLPAGHQI-GTVTPLFQKL 811



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ AD  AR+ RL   + L+  GTDE+G      A 
Sbjct: 271 KNVLITSALPYVNNVPHLGNIIGCVLSADTFARYCRLRNWNTLYLCGTDEYGTATETKAM 330

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             G+T +   D+       +    +IS+D F R
Sbjct: 331 EEGLTPQQICDKYYAVHDQIYKWFNISFDFFGR 363


>gi|254568272|ref|XP_002491246.1| Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA
           synthetase (Gus1p) and Arc1p [Pichia pastoris GS115]
 gi|238031043|emb|CAY68966.1| Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA
           synthetase (Gus1p) and Arc1p [Pichia pastoris GS115]
 gi|328352235|emb|CCA38634.1| methionyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 744

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 108/516 (20%), Positives = 213/516 (41%), Gaps = 49/516 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ ARF +    + LF  GTDE+G      A   
Sbjct: 190 ILITSALPYVNNVPHLGNIVGSVLSADIYARFCKARNYNTLFICGTDEYGTATETKALEE 249

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG-------- 117
            VT +    +  +   D+     I +D F RTT +   +  + ++ K+ + G        
Sbjct: 250 NVTPRELCTKYHKIHSDVYKWFQIGFDYFGRTTTELQTEIAQDIFMKLYNNGYLEEQSMR 309

Query: 118 DIYKGCYSGWYSLR------DEAYYND---DEVYKGAD-----------GQYYNAQHNPV 157
            +Y   ++G+ + R       + +Y D   D+  K               +  NA   P 
Sbjct: 310 QLYCPVHNGFLADRYVEGECPKCHYEDARGDQCDKCGTLLDPFELINPRCKLDNASPEP- 368

Query: 158 QWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                +  F  L   +  L  +  ++  E       R    S++K GL    ++R    W
Sbjct: 369 --KNSDHIFLSLDKLEPPLREWVAKASEEGKWSKNSRTITDSWIKEGLLPRCITRDLV-W 425

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILR 269
           G  +P D   + ++YVW DA   Y++ T    N      ++W    HV     +GKD + 
Sbjct: 426 GTPVPLDGFEKKVLYVWFDATIGYISITA---NYTKHWKEWWKNPDHVDLYQFMGKDNVP 482

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALR 326
           FH + +PA  +       +   + +  ++ ++G K SKS G  V         +     R
Sbjct: 483 FHTVVFPASEIGTGDKWTMLHHLSTTEYLQYEGGKFSKSRGIGVFGNNAQDSGIPPSVWR 542

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L        D  +       + N +L   +GN V+R    +   Y+G++P    +  E
Sbjct: 543 YYLASIRPESSDSQFSWGEFVSKNNNELLANLGNFVNRLTKFVNAKYNGVVPDYDVSNCE 602

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDRA 444
           + E ++   + +L++   +++   + + L   + L +  +++  D +    L    P ++
Sbjct: 603 NYEVLVRDVNAILKQYLIDLEGVHLRKGLEVAMQLSARGNQFLQDNKLDNSLYNDKPAKS 662

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             V+ + + +I  +  ++  ++P+   +I  IL  A
Sbjct: 663 DAVVAIGLNLIYLVGSVIYPYMPETTTQINQILNTA 698


>gi|320581006|gb|EFW95228.1| Methionyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 754

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 103/517 (19%), Positives = 214/517 (41%), Gaps = 49/517 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + ++  GTDE+G      A   
Sbjct: 200 ILITSALPYVNNVPHLGNIVGSVLSADIYARYCKRRNYNAIYICGTDEYGTATETKALED 259

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT +   D+      D+     I +D F RTT  +  +  + ++ K+ + G + +    
Sbjct: 260 KVTPQELCDKYHAVHSDVYKWFQIGFDHFGRTTTPKQTEIAQEMFLKLYNNGYLEEKVMK 319

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK-- 175
             +    + +  D  V        Y+ A G   +   N +   E      +L  +  +  
Sbjct: 320 QLFCPVHKGFLADRYVEGECPRCHYEDARGDQCDKCGNLLDPFELINPRCKLDGHTPEPR 379

Query: 176 -----LLSYYESHPEFILPIERRNE-----------VISFVKSGLKDLSLSRKTFDWGIK 219
                 +S  +  PE    I   +E             S++K GL+   ++R    WG  
Sbjct: 380 ESNHIFISLDKLEPEVRKWIGEASEKGKWSKNSKTITNSWLKEGLQPRCITRD-LTWGTP 438

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHA 272
           +P       ++YVW DA   Y++ T    N       +W    HV     +GKD + FH 
Sbjct: 439 VPLKGFENKVLYVWFDAPIGYISITA---NYTDEWRDWWQNPEHVQLYQFMGKDNVPFHT 495

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P+  +       +   + +  ++ ++G K SKS G  V         V     RY+L
Sbjct: 496 VVFPSTEIGTKEKWTMLHHLNTTEYLQYEGGKFSKSRGIGVFGNNAEATGVSPSVWRYYL 555

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-- 387
                  +D  +       R N++L   +GN V+R    ++  Y+G++P+   F   D  
Sbjct: 556 ASVRPENQDSQFSWYEFVTRNNSELLANLGNFVNRLAKFVIAKYNGVVPS---FRTEDCP 612

Query: 388 --ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
               +L   + +++   ++M+   + + L   + + +  + +    K    L    P+++
Sbjct: 613 VYPELLKDLNSLVKTYVDDMETVHLRKGLETAMMISARGNLFLQENKLDNSLYNDFPEKS 672

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             V+ + + ++  ++ ++  ++P+ + +I +IL V +
Sbjct: 673 DAVVAIGLNIVYLVSAVIAPYMPETSKQIEEILRVPE 709


>gi|206895183|ref|YP_002246881.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737800|gb|ACI16878.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 866

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 168/382 (43%), Gaps = 53/382 (13%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +L ++ Y    E YK A G      H  V+ M  + +F +L+A  D+     E+    I+
Sbjct: 326 ALEEQGYLEKVEPYKHAVGHCQRC-HTVVEPMLSDQWFVKLTAMADEAKRVVETGEVQII 384

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYI----------------- 227
           P ER  +V       ++D  +SR+ + WG +IP    ++  Y+                 
Sbjct: 385 P-ERWIKVYQDWMDNIRDWCISRQIW-WGHRIPVYTCEECGYVFASEEETVEQCPKCGGP 442

Query: 228 -------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAF 278
                  +  W  +        G+ +  +  K  ++P  L + G DIL F    + + A 
Sbjct: 443 VKQEDDVLDTWFSSSLWPFEVFGWPEETEDLKY-YYPTSLLITGYDILFFWVARMIFMAT 501

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L+  +P  ++VF HG +L + G+K+SKS GN +DP+++I+E   DALRY LV  ++ G 
Sbjct: 502 TLTGQIPF-EEVFLHGLVLDEHGQKMSKSKGNTVDPMDMIDEYSADALRYALVSAMSLGG 560

Query: 338 DGFYDKDGLKKRV--NADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSV 393
               D +  + RV    +L N I N    S   +L   +G  +  TP  F+ +D  ILS 
Sbjct: 561 Q---DVNFSESRVEHGKNLTNKIWN----SARYVLSVLEGKQLDTTPNQFSIADRYILSR 613

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  Q + E  +      AL ++ S       Y+     W ++ +  D   +  +   E
Sbjct: 614 LEQTKQFVSECFEAYDFGAALREIESF------YWSEYCDWYIEMSKVDPNYSTYWTLKE 667

Query: 454 VIRQLAILLQAFVPKLANKIFD 475
           V+ Q   L   F+P +  +I+D
Sbjct: 668 VLEQSLKLFHPFLPFVTQEIWD 689



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 20/142 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++ K   S  I  PN     HIGHA ++ + D + R+ +++G +V +  GTD  G     
Sbjct: 33  DKAKPRFSIVIPPPNVTGSLHIGHALDLSLQDAIVRYKKMNGFNVCWVPGTDHAGIATQN 92

Query: 57  KIAKAAQNAGVTTK-----VFVDQ----NSRNFRDMADVLD-----ISYDDFIRTTEKRH 102
            + +A    G+  +     VF+++      R    + D +      + +D    T +   
Sbjct: 93  VVERALLQQGIRRQDLGREVFLEKVWEWKERYGNTILDQITRLGCGVDWDRLRFTMDPVC 152

Query: 103 HDTCRILWKKISDKGDIYKGCY 124
               R  +K++ D+G IYKG Y
Sbjct: 153 ARAVRRAFKELFDRGLIYKGHY 174


>gi|153864441|ref|ZP_01997343.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS]
 gi|152146065|gb|EDN72658.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS]
          Length = 407

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 22/236 (9%)

Query: 255 FWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
           FW  D      H IGKDI  FH ++WPA L +     P  VF HGF+   GEK+SKS G 
Sbjct: 41  FWGKDSQAELYHFIGKDIQYFHCLFWPAMLTAGGFRNPTAVFVHGFLKVDGEKMSKSRGT 100

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            I+    +  +  + LRY+   ++  G  D   + D    RVNADL     N+ SR    
Sbjct: 101 FINARTYLNYLKPEYLRYYFAAKLGYGVDDVDLNLDDFLHRVNADLVGKFVNIASRCAKF 160

Query: 369 ILKDYDGMIPT----PGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           I   ++G + +    P  +    DE            I E  + +  ++A+  +++L   
Sbjct: 161 ITNRFEGQLASELVEPALYQHFIDEG---------NAIAEAYETRDYNKAVRHIMALADR 211

Query: 424 VDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++Y +  KPW + K     A    V    + + R L   L   +P L +K+ D L
Sbjct: 212 ANQYIEEHKPWVIAKQAGQEAELQGVCSQGLNLFRVLMGYLAPILPLLTSKVEDFL 267


>gi|325660697|ref|ZP_08149326.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085577|ref|ZP_08334661.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325473004|gb|EGC76213.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330407464|gb|EGG86966.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 882

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 14/242 (5%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +  +   P    +F HG I   +G K+SKSLGN I
Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGYAYTGKAPFHTVLF-HGLIRDSQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           DP+E+IE+ G DALR  LV   A G D  FYD+   +   N + AN + N  SR + M +
Sbjct: 535 DPLEIIEKYGADALRITLVTGNAPGNDMRFYDE---RVEANRNFANKVWN-ASRFILMNM 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +  +  +P     +  D+ I+S  + + +++ ENM    +  A+ +V   + +   D Y 
Sbjct: 591 EGKEITVPNESDLSAVDQWIISKMNTLTKDVTENMDKFELGIAVQKVYDFIWDEFCDWYI 650

Query: 429 DAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K + +   + NP  A++ LY    V+     LL  F+P +  +I+  L   +E+   
Sbjct: 651 ELAK-YRIYHAEENPAAANSALYTLKTVLGDALKLLHPFMPFVTEEIYGALVPEEESLMM 709

Query: 487 QS 488
            S
Sbjct: 710 SS 711



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R K   +T +  PN   + H+GHA++  + D+L R+ R+ G + L+  GTD
Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHAFDNTLQDILIRYKRMQGYNALWIPGTD 84


>gi|291166072|gb|EFE28118.1| valine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 885

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 60/402 (14%)

Query: 122 GCYSGW--YSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           G Y+G   Y  R E   N +E         +  A G  Y   HN V+ M  + +F ++  
Sbjct: 313 GKYAGMSRYECRKEIVKNLEEAGLLVSVKDHAHAVGHCYRC-HNVVEPMVSKQWFVKMKD 371

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------- 221
                L   E+    ++P +R +++ +     ++D  +SR+ + WG +IP          
Sbjct: 372 LAQPALEALETKKLNLVP-DRFDKIYNMWLENIRDWCISRQLW-WGHRIPAYYCEDCGEM 429

Query: 222 ------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLH 261
                             +  + ++  W  +    ++T G+   P+ +    +F+P    
Sbjct: 430 IVAKQKPERCYKCHSANLEQDEDVLDTWFSSALWPMSTLGW---PEETPEMFRFFPTSTL 486

Query: 262 VIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIE 318
           V G DI+ F  I   + +  L   +P  K VF HG +   +G K+SKSLGN IDP+E+I+
Sbjct: 487 VTGYDIIFFWVIRMVFSSLYLKKEVPF-KDVFIHGLVRDDQGRKMSKSLGNGIDPLEIID 545

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G DALR+ L      G D  +  + ++   N   AN + N  SR + M L++Y  ++ 
Sbjct: 546 HYGADALRFMLASSNTPGNDMRFYMERVESARN--FANKLWN-ASRFILMNLEEYQPVLT 602

Query: 379 TPGA----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQK 432
           T       F   D+ I+S+ ++V +E+ +N+    +  A  ++   +  +  D Y +  K
Sbjct: 603 TREEVEPYFELGDKWIISLSNKVAKEVSDNLDKYELSLAADKIYDFTWSNFCDWYIEMVK 662

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           P  L         T LY    V++++  LL  F+P +  +I+
Sbjct: 663 P-RLYGEAGSEKDTALYTLQYVLKKILKLLHPFMPFITEEIY 703



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------------ 55
           S  +  PN   Q H+GHA +  + D+L R+ R+ G D L+  GTD               
Sbjct: 43  SIVLPPPNITGQLHMGHALDHTLQDILIRYKRMQGYDTLWQPGTDHASIATEVKVVERIR 102

Query: 56  QKIAKAAQNAG---------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           Q + K  +  G            + F D+     + + D  D S + F  T ++  ++  
Sbjct: 103 QTLGKTKEEIGREEFLKHAWAWKEEFGDRIVEQMKKLGDSCDWSRERF--TMDEGCNEAV 160

Query: 107 RILWKKISDKGDIYKG 122
              + K+ ++G IY+G
Sbjct: 161 LEFFVKLYEEGYIYRG 176


>gi|167037935|ref|YP_001665513.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040834|ref|YP_001663819.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914869|ref|ZP_07132185.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723897|ref|YP_003903648.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320116350|ref|YP_004186509.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855074|gb|ABY93483.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856769|gb|ABY95177.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889804|gb|EFK84950.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580958|gb|ADN54357.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319929441|gb|ADV80126.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 879

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 152/325 (46%), Gaps = 51/325 (15%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226
           ER  ++ +     +KD  +SR+ + WG +IP               DPQ           
Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPQKCEACGSPHIH 444

Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLL 280
               ++  W  +     +T G+   P+G++    F+P D+ V G DI+ F    W A ++
Sbjct: 445 QDEDVLDTWFSSALWPFSTMGW---PEGTEDLQYFYPTDVLVTGYDIIFF----WVARMI 497

Query: 281 SANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +L   K+V     ++H      +G K+SKSLGN IDP+EVIEE G D LR+ LV   A
Sbjct: 498 FMSLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNA 557

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  + +D  K  ++ + AN + N  SR V + L D D  + T G  T +D+ IL+  
Sbjct: 558 PGNDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRY 613

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++E+ EN++   +  A  ++   V SE  D Y +  KP  L   N +       V  
Sbjct: 614 NNIVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLR 672

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+     LL  F+P +  +I+  L
Sbjct: 673 YVLDNTLRLLHPFMPFITEEIWQNL 697


>gi|292669954|ref|ZP_06603380.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648425|gb|EFF66397.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 904

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 127/271 (46%), Gaps = 27/271 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +      T G+   P+ +K    F+P    V G DI+     +W A ++   L
Sbjct: 470 VLDTWFSSALWPFETLGW---PEETKDLRHFYPTSTLVTGYDII----FFWVARMVMMGL 522

Query: 285 PLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   + VF HG +   +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D
Sbjct: 523 RFGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGND 582

Query: 339 -GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVC 394
             FY      +RV A  + AN I N  SR + M L+   D  +P     T +D  ILS  
Sbjct: 583 MRFY-----WERVEAARNFANKIWN-ASRYMLMNLEGTDDSFVPEESDCTLADRWILSRA 636

Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           ++   ++  N++N  +  A   +   L SE  D Y +  K     K NP   +T LYV  
Sbjct: 637 AQTAHDVTANLENYELGEAGRMIYEFLWSEFCDWYIELTKARLYDKENPRARNTALYVLR 696

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V+ +   LL  F+P L  +I+  L  A E+
Sbjct: 697 TVLERTMRLLHPFMPFLTEEIWQKLPHAGES 727



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D           +AG+
Sbjct: 61  SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCD-----------HAGI 109

Query: 68  TTKVFVDQNSR 78
            T+  V+++ R
Sbjct: 110 ATQAKVEESLR 120


>gi|312793668|ref|YP_004026591.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180808|gb|ADQ40978.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 874

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A ++ + L     
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502

Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  + 
Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  K   N + AN I N  +R V M L       P    FT ++  ILS    +++E+ 
Sbjct: 562 ME--KVEANRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLIREVT 618

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   I  A  ++   + +   D Y +  KP  L          V YV + V+  +  
Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILK 677

Query: 461 LLQAFVPKLANKIF 474
           LL  F+P +  +I+
Sbjct: 678 LLHPFMPFVTEEIY 691


>gi|326481166|gb|EGE05176.1| methionyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 617

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 116/515 (22%), Positives = 215/515 (41%), Gaps = 54/515 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ + N  PH+G+    +++ D  AR+ R  G++ L+  GTDE+G      A
Sbjct: 17  QRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G + + 
Sbjct: 77  LAEKCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLQKNGFLEER 136

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-------------QYYNAQ-----HNP 156
             +  Y     ++  D  V        Y  A G             Q  N +       P
Sbjct: 137 MTTQLYCEEHHSFLADRFVEGECPGCGYADARGDQCDLCGQLLESLQLRNPRCKIDGSTP 196

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKT 213
           V   + +  F  L   Q K+  ++  H          N  +   S++K GLK  S++R  
Sbjct: 197 VT-RDTKHIFLELDKLQAKVEDFF--HDSAANGSWSNNGAVITGSWLKEGLKPRSITRD- 252

Query: 214 FDWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IG 264
             WG ++P  P Y   ++Y W DA   Y++ T  Y D  +    ++W  P D+ +   IG
Sbjct: 253 ISWGTRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRNPKDVQLYQFIG 307

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH++ +PA  +       +   + +  ++ ++G K SKS G  V         + 
Sbjct: 308 KDNVVFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIP 367

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTP 380
            D  R FL+       D  +  D      N  L   +GN VSR +  +  + Y+ ++P  
Sbjct: 368 ADIWRCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIMPNW 427

Query: 381 GAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438
             + ES  S      +R+L +    +    I  A + V+ +  + + +    +    L +
Sbjct: 428 TQYHESSFSTFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAE 487

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             P + + V+ +    +  LA L+  ++P  AN I
Sbjct: 488 NEPAKCAAVIGIATNTVHLLASLVAPYMPDTANSI 522


>gi|154503249|ref|ZP_02040309.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149]
 gi|153796243|gb|EDN78663.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149]
          Length = 882

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 42/328 (12%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYV------ 230
           ER N++       +KD  +SR+ + WG +IP              + P+   +       
Sbjct: 386 ERFNKIYLHWLENIKDWCISRQIW-WGHRIPAYYCDECGDFVVAREMPETCPHCGCTHFT 444

Query: 231 --------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
                   W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  +  
Sbjct: 445 QDEDTLDTWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYEH 503

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P    V  HG +   +G K+SKSLGN IDP+EVI++ G DALR  LV   A G D 
Sbjct: 504 TGKSPF-HTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGCDALRLTLVTGNAPGNDM 562

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  + ++   N   AN + N  SR + M +++     P      E+D+ ILS  +R+ +
Sbjct: 563 RFYHERVESSRN--FANKVWN-ASRFIMMNMEENVVAEPDASLLNEADKWILSRVNRLAK 619

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVI 455
           ++ ENM    +  A+ +V   + +   D Y +  K + +     ++A+   VL+V   V+
Sbjct: 620 DVTENMDKFELGIAVQKVYDFIWDEFCDWYVETAK-YRIYHKEEEKAAADCVLWVLKTVL 678

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483
           +Q   LL  F+P +  +I+ +L   +E+
Sbjct: 679 KQALKLLHPFMPFITEEIYSVLVPEEES 706



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R +   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 33 DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTD 84


>gi|322800514|gb|EFZ21518.1| hypothetical protein SINV_15365 [Solenopsis invicta]
          Length = 1016

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 126/569 (22%), Positives = 224/569 (39%), Gaps = 109/569 (19%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K    + I++A+ Y N  PH+G+    II  VL+          +F +GTDE+G      
Sbjct: 260 KGERNILITSALPYVNNVPHLGN----IIGCVLSA--------DIFASGTDEYGTATEAK 307

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T +   D+      D+     I +D F RTT     +  +  + KI  +G +  
Sbjct: 308 ALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQAFFLKIKSQGYVLT 367

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------ 161
                 +    + +  D  V        Y+ A G   +   + V  +E            
Sbjct: 368 ETVEQLHCEFCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLVNAVELINPRCKICNTR 427

Query: 162 -----EEGYFFRLSAYQDKLLSY----YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   +F  L   ++KL  Y    Y+        + +     ++++ GLK   ++R 
Sbjct: 428 PVVKNSVQFFLDLPKLEEKLKEYSATVYKGWSNVAKVVSK-----TWLRDGLKPRCITRD 482

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV-----I 263
              WGI +P +     + YVW DA   Y++ T           K+W  P D  V     +
Sbjct: 483 -LKWGIPVPVEGFENKVFYVWFDAPFGYISITKRYTK---EYKKWWQPPQDTKVDLCQFM 538

Query: 264 GKDILRFHAIYWPAFLLSAN--LPLPKKVFSHG---------------------FILH-- 298
            KD + FHAI +PA LL+ N    L + + + G                     F+ H  
Sbjct: 539 AKDNVPFHAIMFPACLLAVNQNYTLTRNILATGTISKECKSLGCIYFMTVFVSYFLCHLF 598

Query: 299 ---------KGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKK 348
                    + +K SKS G  +   +  +  +  D  R++L       +D  ++   L  
Sbjct: 599 RNISEYLNYEDKKFSKSRGIGVFGTDARDTGIPADVWRFYLAYIRPETQDSTFNWVDLAT 658

Query: 349 RVNADLANGIGNLV-----------SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           + N++L N +GN V           SR++    K +D  +P P    E+D ++L++  R 
Sbjct: 659 KNNSELLNNLGNFVNRFVVSQKLVMSRALVFCEKFFDSNVP-PLEAEEADWTVLALAQRE 717

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEV 454
           L      M+   +   L  ++++    ++Y   Q+PW   K N D   +A TV+ +   +
Sbjct: 718 LSSYINAMEQAKLRDGLRHILAISKHGNQYMQFQQPWVKIKGNDDDKKKAGTVVAICCNL 777

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
              L+ LL  F+P +A ++   L ++++N
Sbjct: 778 ACLLSALLAPFMPNVAKQLRSQLGLSNKN 806


>gi|169831629|ref|YP_001717611.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638473|gb|ACA59979.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 881

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 24/269 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWP 276
           I  DP  ++  W  +     +T G+     G  A   +F+P  + V G+DI+     +W 
Sbjct: 444 IEQDPD-VLDTWFSSALWPFSTLGW----PGKTADLDRFYPTSVLVTGRDII----FFWV 494

Query: 277 AFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++ + L    +     VF HG +L   G K+SKSLGN +DPIEVIE+ G D+LR+ LV
Sbjct: 495 ARMIFSGLKFMDREPFAEVFIHGLVLDALGRKMSKSLGNGVDPIEVIEKYGADSLRFMLV 554

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G D  +  + L+   N   AN + N  SR V + L DY      PG    +D  I
Sbjct: 555 TGNTPGNDLRFHFEKLESSRN--FANKLWN-ASRFVLLNLGDYRPDKAAPGTLELADRWI 611

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS     L      ++   +  A   +   + +   D Y +  KP   + T+ +RA    
Sbjct: 612 LSRFGAALARTTAGLEAYELGEAARALYEFIWDEFCDWYIELVKPRLYQGTDEERA-VAQ 670

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           YV V V+R    LL  F+P +  +++  L
Sbjct: 671 YVLVRVLRSTLELLHPFMPFITEELWQHL 699



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
          S  +  PN   + H+GHA    + DVL R+ R+ G + L+  GTD  G  IA  A+  G
Sbjct: 41 SIVMPPPNVTGELHMGHALNNTLQDVLTRWRRMQGFETLWLPGTDHAG--IATQARVEG 97


>gi|104780203|ref|YP_606701.1| methionine--tRNA ligase [Pseudomonas entomophila L48]
 gi|95109190|emb|CAK13887.1| putative Methionine--tRNA ligase [Pseudomonas entomophila L48]
          Length = 662

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 196/502 (39%), Gaps = 44/502 (8%)

Query: 16  PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN   H+GH +   I  DVL R     G  V + +G D++   +   A   G +     D
Sbjct: 122 PNGDLHLGHLSGPYIAGDVLKRVLAGAGAQVFYGSGRDDNQTYVVTCAAREGFSPSECAD 181

Query: 75  QNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG----CYSGWYS 129
             +   R+      I  D FI    +  + D      +++ D+G IY            +
Sbjct: 182 HYAEAIRETWQGYGIDMDFFITPDNQGEYADFVHHYLQRLYDQGLIYAKDTPVFVDNQGN 241

Query: 130 LRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWME-----------------EEGYFFRLS 170
              EA+ +    + G  +DG    A   P Q ++                 E   FFRLS
Sbjct: 242 ALHEAFIHGGCPHCGESSDGNACEACGQPNQCVDLTQPRVKQDGRQPQLKIETRLFFRLS 301

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIM 228
           A  D+L SY ++     +P        + +  GL D+ +S ++ DWGI+  +P     ++
Sbjct: 302 ALADELASYVQT---ANMPAHVYQLCHTMLSQGLPDICISHRS-DWGIRHRLPGMQDQVV 357

Query: 229 YVWIDALTNYLTTTGYLDNPDGSK----AKFWPADL---HVIGKDILRFHAIYWPAFLLS 281
           YVW +    YL     L   +G +    A+ +   +   H  G D   +H + +PA  L+
Sbjct: 358 YVWFEMAFGYLWAASELPGAEGDRVARAAQRYAGAMDIVHCYGFDNAYYHTLLFPAVYLA 417

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             L  P+    +  +   G K S S  ++I   + + E G D  R  L+     G    +
Sbjct: 418 LGLTPPRHHVVNELLDLNGSKFSTSRRHLIWGKDFLTEAGADYARMALMLTRPEGVRTNF 477

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             D + +R+N   A+ + + V R    + +   G +P  GA+    +       + +   
Sbjct: 478 TVDQVCERINDLFADKLTHWVQRLQQHVARQ-GGQVPESGAWLSDQKIYHGELMQWMAGY 536

Query: 402 RENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQ 457
           R+    Q     R   QV  ++    R+  AQ+   L    P  + A T + +     R 
Sbjct: 537 RQAAATQTFSPRRMAEQVAQVIDRAWRFGLAQEHL-LAPGQPLSNHARTAVALLALTARW 595

Query: 458 LAILLQAFVPKLANKIFDILFV 479
           LA      +P L+ ++ ++L +
Sbjct: 596 LAHATTPLMPGLSRQLNEVLNI 617


>gi|296813921|ref|XP_002847298.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842554|gb|EEQ32216.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 615

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 109/512 (21%), Positives = 214/512 (41%), Gaps = 48/512 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ + N  PH+G+    +++ D  AR+ R  G++ L+  GTDE+G      A
Sbjct: 17  KRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+      ++    +IS+D F RTT +   D  + ++ K+   G + + 
Sbjct: 77  LVDKCTPQELCDKYHAIHAEIYKWFNISFDIFGRTTTQLQTDITQDIFLKLKQNGFLTER 136

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------- 161
             +  Y     ++  D  V        Y  A G   +     ++ ++             
Sbjct: 137 MTTQLYCQEHHSFLADRFVEGECPVCGYTDARGDQCDLCGQLLESLQLKYPRCKIDGSKP 196

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDW 216
                +  F  L   Q  + S++       +       + S ++K GLK  S++R   +W
Sbjct: 197 ITKDTKHIFLELDKLQPNIESFFRDSAAAGVWSNNGTVITSAWLKEGLKPRSITRD-INW 255

Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267
           G ++P  P Y   ++Y W DA   Y++ T  Y D  +    K+W  P D+ +   IGKD 
Sbjct: 256 GTRVPL-PGYEEKVIYSWFDACIGYVSITAQYTDQWE----KWWRNPEDVQLYQFIGKDN 310

Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH++ +P   +       K   + +  ++ ++G K SKS G  V         +  D 
Sbjct: 311 VVFHSVIFPGSQIGTGDTWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADI 370

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAF 383
            R FL+       D  +  D      N  L    GN V+R +  +  + Y+ ++P    +
Sbjct: 371 WRCFLLSHRPEAGDSEFTWDAFINCNNNLLLKNFGNFVNRVLKFVNSRHYNNIVPNWAEY 430

Query: 384 TE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
            E S ++     +++L +  + +    I  A + V+ +  + + +    K    L +  P
Sbjct: 431 REDSFDTFKKEINKLLSQYIQELDTVKIRSAWSIVLQISQQGNGFLQLNKLDNNLAENEP 490

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            R + V+ + + ++  LA ++  ++P  A  I
Sbjct: 491 FRCAAVIGIAINMVHLLASIIAPYMPDTAKSI 522


>gi|312127460|ref|YP_003992334.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777479|gb|ADQ06965.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 874

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A ++ + L     
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502

Query: 285 -PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  + 
Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  K   N + AN I N  +R V M L       P    FT ++  ILS    +++E+ 
Sbjct: 562 ME--KVEANRNFANKIWN-AARFVLMNLDIDTSFKPDASKFTFTERWILSRLDTLVREVT 618

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   I  A  ++   + +   D Y +  KP  L          V YV + V+  +  
Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDVLK 677

Query: 461 LLQAFVPKLANKIF 474
           LL  F+P +  +I+
Sbjct: 678 LLHPFMPFVTEEIY 691


>gi|222529480|ref|YP_002573362.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456327|gb|ACM60589.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 874

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A ++ + L     
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502

Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  + 
Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  K   N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ 
Sbjct: 562 ME--KVEANRNFANKIWN-AARFVIMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVT 618

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  
Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPI-LYNKEAENNKEVQYVLLTVLTNVLK 677

Query: 461 LLQAFVPKLANKIF 474
           LL  F+P +  +I+
Sbjct: 678 LLHPFMPFVTEEIY 691


>gi|302684777|ref|XP_003032069.1| hypothetical protein SCHCODRAFT_67821 [Schizophyllum commune H4-8]
 gi|300105762|gb|EFI97166.1| hypothetical protein SCHCODRAFT_67821 [Schizophyllum commune H4-8]
          Length = 700

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 122/533 (22%), Positives = 222/533 (41%), Gaps = 61/533 (11%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE E+ + I++A+ Y N  PH+G+     + ADV +R++R      L+  GTDE+G    
Sbjct: 29  KEGERNILITSALPYCNNVPHLGNIIGSTLSADVFSRYNRTRNRRTLYVCGTDEYGTATE 88

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T K   D+         +  ++ +D F RT+   H    + ++  +   G +
Sbjct: 89  TQALKEGITPKELCDKYHALHVATYEWFNLGFDYFGRTSTPWHTTISQEIFTNLYKNGYL 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWME------- 161
            K      Y      +  D  V        Y  A G   +      +P+  ++       
Sbjct: 149 EKQDKEQTYCEGCPKFLADRFVEGTCPHCGYDDARGDQCDGCSRTLDPIDLIKPRCLVDK 208

Query: 162 --------EEGYFFRLSAYQDKLLSYYES-------HPEFILPIERRNEVI-SFVKSGLK 205
                       + +L+A Q K   + ++        P  +  I    E+I   +K+GL 
Sbjct: 209 THVVTRKISSHMYLKLNAIQPKTEEWIKATWKKGKWSPNAV--INSEGEIIDPRLKNGLV 266

Query: 206 DLSLSRKTFDWGIKIP--DDP-----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
             +++R    WG+ +P  D+        ++YVW DA   Y + T     P+  +  F P 
Sbjct: 267 PTAITRD-LTWGVPVPVVDEALEGMKDKVLYVWFDAPIGYPSITANY-TPEWRQWWFNPE 324

Query: 259 DLHV---IGKDILRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLG-NVID 312
            +++   +GKD + FH +Y+P+  L    N  +   + +  F+ ++  K SKS    V  
Sbjct: 325 HVNLYQFMGKDNVYFHTVYFPSVELGDGRNWTMLHHLSTTEFLNYENGKFSKSKNRGVFG 384

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P      V  D  RY+L+       D  +         N  L N  GN V+R++  +   
Sbjct: 385 PAAKETGVPSDVWRYYLLSTRPETGDAMFSWSEFIAANNNVLLNNFGNFVNRALKFVTSQ 444

Query: 373 YDGMIP----TPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           YD ++P     PG ++    +D   ++  + +L E   NM+   +   L  +++L +  +
Sbjct: 445 YDSIVPDGGDAPGPYSPNDVNDADFIADVNNLLAEYTANMEAVKLRAGLQTIMALAARGN 504

Query: 426 RYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y  A K  + L   +P R + VL   V +I  L++L+  ++P  +N +   L
Sbjct: 505 GYLQASKLGKALMIEDPTRCAQVLARAVNLIYVLSVLVYPYMPATSNAMLAQL 557


>gi|312622286|ref|YP_004023899.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202753|gb|ADQ46080.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 874

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A ++ + L     
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502

Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  + 
Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  K   N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ 
Sbjct: 562 ME--KVEANRNFANKIWN-AARFVIMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVT 618

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  
Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPI-LYNKEAENNKEVQYVLLTVLTNVLK 677

Query: 461 LLQAFVPKLANKIF 474
           LL  F+P +  +I+
Sbjct: 678 LLHPFMPFVTEEIY 691


>gi|291542091|emb|CBL15201.1| valyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 897

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 157/367 (42%), Gaps = 62/367 (16%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  ++ M  + +F +++      +          +P ER  +V       +KD  +SR+ 
Sbjct: 374 HTTIEPMVSKQWFVKMAPLAKPAIDVVRKGNTKFIP-ERFEKVYFHWMENIKDWCISRQL 432

Query: 214 FDWGIKIP--------------DDPQYI--------------MYVWIDALTNYLTTTGYL 245
           + WG +IP              D P+                +  W  +     +T G+ 
Sbjct: 433 W-WGHRIPAWYCEECGEVMVAKDAPEKCCKCGSTHIHQDEDTLDTWFSSALWPFSTLGWP 491

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-H 298
           D     +  F+P    V G DI+ F    W A ++        + P  K VF HG +   
Sbjct: 492 DKTPELEY-FYPTSTLVTGYDIIFF----WVARMIFSACENMGSAPF-KTVFMHGIVRDE 545

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLAN 356
            G K+SKSLGN IDP+EVI++ G DALR+FL      G D  Y      KRV   A+ AN
Sbjct: 546 NGIKMSKSLGNGIDPLEVIDKYGADALRFFLATGNTPGNDMRYS----DKRVEACANFAN 601

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + N  SR V M + D+D     P   T  D+ I+S  + V +E+ EN++   +  A+ +
Sbjct: 602 KLWN-ASRYVHMNIDDHDVKNELPKTLTTEDKWIVSTLNTVAKEVNENLEKFELGIAVQK 660

Query: 417 VISLVSEVDRYFDAQKPW--ELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +   +      +D    W  EL KT    + + A     V + V+ Q+  LL  F+P + 
Sbjct: 661 IYEFI------WDCYCDWYIELVKTRLSSDGEDAQNARQVLLYVLDQILRLLHPFMPYIT 714

Query: 471 NKIFDIL 477
            +I+  +
Sbjct: 715 EEIWQTI 721



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 25/189 (13%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69
           PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        KI +A +  G+T 
Sbjct: 46  PNITGQLHMGHALDETLQDILIRWRRMQGYSALWLPGTDHASIATEAKIVEAMRKEGITK 105

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D     F   A      Y   I +  K+   +C   W++  ++  + +GC      
Sbjct: 106 E---DIGREEFLKRAWEWKKVYGGRITSQLKKLGSSCD--WER--ERFTMDEGCSKAVKE 158

Query: 130 LRDEAYYNDDEVYKG------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY--- 180
           +     YND ++Y+G            +     V++ E+ G+F+ L  YQ K    Y   
Sbjct: 159 VFVR-LYNDGKIYRGNRMVNWCPHCCTSISDAEVEYKEQNGHFWHL-LYQVKETGEYLEI 216

Query: 181 -ESHPEFIL 188
             + PE +L
Sbjct: 217 ATTRPETML 225


>gi|326470325|gb|EGD94334.1| methionyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 617

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 214/514 (41%), Gaps = 52/514 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ + N  PH+G+    +++ D  AR+ R  G++ L+  GTDE+G      A
Sbjct: 17  QRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G + + 
Sbjct: 77  LAEKCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLQKNGFLEER 136

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-------------QYYNAQ-----HNP 156
             +  Y     ++  D  V        Y  A G             Q  N +       P
Sbjct: 137 MTTQLYCEEHHSFLADRFVEGECPGCGYADARGDQCDLCGQLLESLQLRNPRCTIDGSTP 196

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTF 214
           V   + +  F  L   Q K+  ++               VI  S++K GLK  S++R   
Sbjct: 197 VT-RDTKHIFLELDKLQAKVEDFFHDSAAN-GSWSNSGAVITGSWLKEGLKPRSITRD-I 253

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGK 265
            WG ++P  P Y   ++Y W DA   Y++ T  Y D  +    ++W  P D+ +   IGK
Sbjct: 254 SWGTRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRNPKDVQLYQFIGK 308

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH++ +PA  +       +   + +  ++ ++G K SKS G  V         +  
Sbjct: 309 DNVVFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPA 368

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPG 381
           D  R FL+       D  +  D      N  L   +GN VSR +  +  + Y+ ++P   
Sbjct: 369 DIWRCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIMPNWT 428

Query: 382 AFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
            + ES  S      +R+L +    +    I  A + V+ +  + + +    +    L + 
Sbjct: 429 QYHESSFSTFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAEN 488

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            P + + V+ +    +  LA L+  ++P  AN I
Sbjct: 489 EPSKCAAVIGIATNTVHLLASLVAPYMPDTANSI 522


>gi|302871712|ref|YP_003840348.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574571|gb|ADL42362.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 874

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 19/254 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A ++ + L     
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSALEHMGK 502

Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  + 
Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  K   N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ 
Sbjct: 562 ME--KVEANRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVT 618

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   I  A  ++   + +   D Y +  KP  L          V YV + V+  +  
Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILK 677

Query: 461 LLQAFVPKLANKIF 474
           LL  F+P +  +I+
Sbjct: 678 LLHPFMPFVTEEIY 691


>gi|258645848|ref|ZP_05733317.1| valine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403221|gb|EEW96768.1| valine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 883

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 136/290 (46%), Gaps = 28/290 (9%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPA 277
           I  DP  ++  W  +     +T G+   PD +    +++P    V G DI+ F    W A
Sbjct: 444 IRQDPD-VLDTWFSSALWPFSTMGW---PDRTPVLNQWYPTSTMVTGYDIIFF----WVA 495

Query: 278 FLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  ++   K+     VF HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV 
Sbjct: 496 RMMFMSMEFMKEIPFRYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVT 555

Query: 332 EIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDES 389
               G D  FY +   +   N + AN + N  S+   M L DYD   IP    +T +D+ 
Sbjct: 556 GNTPGNDMRFYYE---RVEGNRNFANKLWN-ASKFTLMNLDDYDPRFIPEESQYTLADKW 611

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTV 447
           IL   ++  + + EN+    +  A   +      S  D Y +  K       N DR  T 
Sbjct: 612 ILEGLAQTEEHVSENLDKYELGAAADSIYDFAWNSFCDWYIETAKGRLYGAHNADRQVT- 670

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLK 494
            YV V V+ ++  LL  F+P +   ++  L  + E      + + D+RL+
Sbjct: 671 QYVLVYVLTRIMALLHPFMPFITEHLWQHLHHSGETLARAPWPAADERLR 720



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  +  PN   Q H+GHA +  + D+L R+ R+ G +VL+  G D           +AG+
Sbjct: 41 SIVLPPPNVTGQLHMGHALDNTLQDILIRYKRMQGYNVLWLPGKD-----------HAGI 89

Query: 68 TTKVFVDQN 76
           T+V V++ 
Sbjct: 90 ATQVKVEKQ 98


>gi|257440904|ref|ZP_05616659.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257196684|gb|EEU94968.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 901

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 171/398 (42%), Gaps = 52/398 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L++  +  + E  K   G  Y   H+ ++ M  + +F ++       +   E      +P
Sbjct: 350 LKEGGFLKEIEPLKHEVGTCYRC-HSTIEPMVSKQWFVKMEPLAKPAIESVEKGEIKFVP 408

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
                  ++++K G +D  +SR+ + WG +IP                            
Sbjct: 409 ERFTKNYLNWMK-GTRDWCISRQLW-WGHQIPAFYCNDCGETVVAKEMPCTCPKCGGSHF 466

Query: 222 -DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
             DP   +  W  +     +T G+ +        F+P +  V G DI+ F    W + ++
Sbjct: 467 TQDPD-TLDTWFSSALWPFSTLGWPNEDSADLKYFYPTNTLVTGYDIIGF----WVSRMI 521

Query: 281 SANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            + L    K     V  HG +   +G K+SKSLGN IDP+EVI + G DALR+ L+    
Sbjct: 522 FSGLAYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLLDGST 581

Query: 335 CGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            G D  Y     +K+V A  + AN + N     +  + +D+   +P       SD+ +L+
Sbjct: 582 PGNDMRYS----EKKVEAARNFANKLWNATRFVLMNLPEDFQPGLPEESKLDMSDKWVLT 637

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450
             ++V   + +N+ +  +  A A++ S + +V  D + +  KP  L   + ++A T   V
Sbjct: 638 KLNQVAGAMTDNLDHFEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTARRV 696

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            V V+ +   LL  F+P +  +++  L  + E    QS
Sbjct: 697 LVYVLDKALKLLHPFMPFITEELYQALPGSAETIMTQS 734



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 29/185 (15%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69
           PN   Q H+GHA +  + DVL R  R+ G   L+  GTD        K+ +A +  G+T 
Sbjct: 45  PNVTGQLHMGHALDNTMQDVLIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 104

Query: 70  KV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           ++                + ++     + +    D   + F  T ++   D  + ++ ++
Sbjct: 105 EMVGRDGFLERAWDWKTKYGNRIVSQLKKLGTSCDWQRERF--TMDEGCSDAVKEVFVRL 162

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            DKG IY+G     +        +D EV Y+  DG +++  + PV+   E G    L+  
Sbjct: 163 YDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGNFWHLLY-PVK---ETGEMLELATT 218

Query: 173 QDKLL 177
           + + +
Sbjct: 219 RPETM 223


>gi|303229381|ref|ZP_07316171.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515917|gb|EFL57869.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 885

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 14/265 (5%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
           +  DP  ++  W  +      T G+    D ++ K W P  + V G DI+ F        
Sbjct: 445 VTQDPD-VLDTWFSSGLWPFATMGW--PKDTAELKQWYPTSVLVTGYDIIFFWVARMIFM 501

Query: 279 LLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L     +P K VF HG +   +G K+SKSLGN I+P++VI E G DALR+ LV     G
Sbjct: 502 ALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADALRFTLVTGNTPG 561

Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394
            D  FY +   +   N + AN I N  S+ V M L +YD   +PT    T +D+ I+   
Sbjct: 562 NDMRFYME---RVEANRNFANKIWN-ASKFVLMNLTNYDESFVPTEADLTLADKWIVEKY 617

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  +  I  N+    +  A + V   +  +  D Y +  KP      N     TV Y+ V
Sbjct: 618 NETVASITANLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSDANERDRRTVQYLLV 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            ++R +  LL  F+P +   I+  L
Sbjct: 678 TILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 23/123 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKA----------- 61
           H+GHA +  + D+L RF R+ G +VL+  GTD  G        + +AK            
Sbjct: 54  HMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGRE 113

Query: 62  --AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              +      K + D   +  R +    D S + F  T ++ ++   R ++  + +KG I
Sbjct: 114 KFVERVWKWKKEYGDTIVKQIRSLGASCDWSRERF--TLDEGYYHAVREVFVSLYEKGLI 171

Query: 120 YKG 122
           Y+G
Sbjct: 172 YRG 174


>gi|303231399|ref|ZP_07318133.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513995|gb|EFL56003.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 885

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 14/265 (5%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
           +  DP  ++  W  +      T G+    D ++ K W P  + V G DI+ F        
Sbjct: 445 VTQDPD-VLDTWFSSGLWPFATMGW--PKDTAELKQWYPTSVLVTGYDIIFFWVARMIFM 501

Query: 279 LLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L     +P K VF HG +   +G K+SKSLGN I+P++VI E G DALR+ LV     G
Sbjct: 502 ALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADALRFTLVTGNTPG 561

Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394
            D  FY +   +   N + AN I N  S+ V M L +YD   +PT    T +D+ I+   
Sbjct: 562 NDMRFYME---RVEANRNFANKIWN-ASKFVLMNLTNYDESFVPTEADLTLADKWIVEKY 617

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  +  I  N+    +  A + V   +  +  D Y +  KP      N     TV Y+ V
Sbjct: 618 NETVASITANLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSDANERDRRTVQYLLV 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            ++R +  LL  F+P +   I+  L
Sbjct: 678 TILRHMLELLHPFMPFVTEHIWQHL 702



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA +  + D+L RF R+ G +VL+  GTD           +AG+ T++ V++
Sbjct: 54 HMGHALDNTLQDILIRFKRMQGYNVLWMPGTD-----------HAGIATQIKVEE 97


>gi|313115499|ref|ZP_07800964.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622209|gb|EFQ05699.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 922

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 20/280 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP   +  W  +     +T G+ +        F+P +  V G DI+ F    W + 
Sbjct: 486 KLTQDPD-TLDTWFSSALWPFSTLGWPNEESEDLKYFYPTNTLVTGYDIIGF----WVSR 540

Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + L    K     V  HG +   +G K+SKSLGN IDP+EVI + G DALR+ LV  
Sbjct: 541 MIFSGLAYTGKAPFSTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDG 600

Query: 333 IACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              G D  Y    ++K+V A  + AN + N     +  + +D+   +P+      SD+ +
Sbjct: 601 STPGNDMRY----IEKKVEAARNFANKLWNATRFVLMNLPEDFTPGLPSEDKLDMSDKWV 656

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448
           L+  ++V   + +N+ +  +  A A++ S + +V  D + +  KP  L   + ++A T  
Sbjct: 657 LTKLNQVAGAMTDNLDHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTAR 715

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            V V V+ +   LL  F+P +  +++  L  + E    QS
Sbjct: 716 RVLVYVLDKALKLLHPFMPFITEELYQALPGSAETIMTQS 755



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 31/186 (16%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69
           PN   Q H+GHA +  + D+L R  R+ G   L+  GTD        K+ +A +  G+T 
Sbjct: 66  PNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 125

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKK 112
           ++        F D A      Y + I +  K+   +C                 + ++ +
Sbjct: 126 EMV---GRDGFLDRAWAWKTKYGNRIVSQLKKLGSSCDWDRERFTMDEGCSEAVKEVFVR 182

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           + DKG IY+G     +        +D EV Y+  DG +++  + PV+   E G    L+ 
Sbjct: 183 LYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLY-PVK---ETGEMLELAT 238

Query: 172 YQDKLL 177
            + + +
Sbjct: 239 TRPETM 244


>gi|312875830|ref|ZP_07735820.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797311|gb|EFR13650.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 882

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 28/279 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A ++ + L     
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGK 502

Query: 285 -PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  + 
Sbjct: 503 EPF-KYVLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFH 561

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +  K   N + AN I N  +R + M L       P    FT ++  ILS    +++E+ 
Sbjct: 562 ME--KVEANRNFANKIWN-AARFMLMNLDIDTSFKPDESKFTFTERWILSRLDTLIREVT 618

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  
Sbjct: 619 ENLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKPI-LYNKEAENNKEVQYVLLTVLTNVLK 677

Query: 461 LLQAFVPKLANKIF-------DILFVAD--ENRCFQSLD 490
           LL  F+P +  +I+       + L ++   E +C+ S D
Sbjct: 678 LLHPFMPFVTEEIYLNLPHDEESLVISKWPEAKCYYSAD 716


>gi|121534137|ref|ZP_01665962.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307240|gb|EAX48157.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 884

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 15/279 (5%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +D+S   K    G K+  DP  ++  W  +     +T G+ +      A F+P  + V G
Sbjct: 431 EDVSCCPKC---GGKVEQDPD-VLDTWFSSALWPFSTMGWPEK-TAELAHFYPTSVLVTG 485

Query: 265 KDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321
            DI+ F    + + A      +P  + VF HG +   +G K+SKSLGN IDP+EVIE+ G
Sbjct: 486 YDIIFFWVARMVFMAMEFQREIPF-RYVFIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYG 544

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTP 380
            D LR+ LV     G D  +  + ++   N   AN I N  SR V M L  +D    P P
Sbjct: 545 ADTLRFTLVTGNTPGNDMRFYWERVESSRN--FANKIWN-ASRFVLMNLDGFDAAAQPDP 601

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK 438
             F  +D  ILS  ++ + ++  N++   +  A   +   +     D Y +  K    +K
Sbjct: 602 ARFALADRWILSRYAQTVADVTANLEKFELGEAARLLYEFIWNEYCDWYIELTKGRLYRK 661

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N     T  YV   V+R    LL  F+P +   I+  L
Sbjct: 662 ENAQDRETAQYVLWYVLRGTLELLHPFMPFITEAIWQAL 700



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 26/184 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           E +K   S  I  PN   Q H+GHA +  + D+L RF R+ G + L+  GTD  G     
Sbjct: 34  EPDKEPFSIVIPPPNVTGQLHMGHALDNTLQDILIRFKRMQGYNTLWMPGTDHAGIATQI 93

Query: 57  KIAKAAQNAGVT-----TKVFVDQ--------NSRNFRDMADVLDISYDDFIR---TTEK 100
           K+ +     G+T      + F+D+         SR  + +  +   +  D++R   T ++
Sbjct: 94  KVEEMLAKEGLTRYDLGREKFIDRVWEWKRQYGSRIIKQLKSLG--ASCDWVRERFTMDE 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
                 R ++  + +KG IY+G     +  R +   +D EV ++   G  Y+ ++ PV+ 
Sbjct: 152 GCSRAVREVFVSLYEKGLIYQGNRITNWCPRCKTALSDIEVEHEEKSGHLYHVRY-PVEG 210

Query: 160 MEEE 163
           M+ E
Sbjct: 211 MDGE 214


>gi|295102463|emb|CBL00008.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 901

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 20/282 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G ++  DP   +  W  +     +T G+ +        F+P +  V G DI+ F    W 
Sbjct: 463 GTRLTQDPD-TLDTWFSSALWPFSTLGWPNEESEDLKYFYPTNTLVTGYDIIGF----WV 517

Query: 277 AFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + ++ + L    K     V  HG +   +G K+SKSLGN IDP+EVI + G DALR+ LV
Sbjct: 518 SRMIFSGLAYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLV 577

Query: 331 REIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                G D  Y     +K+V A  + AN + N     +  + +D+   +P       SD+
Sbjct: 578 DGSTPGNDMRYS----EKKVEAARNFANKLWNATRFVLMNLPEDFQPGLPGEEKLDMSDK 633

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST 446
            +L+  ++V   + +N+ +  +  A A++ S + +V  D + +  KP  L   + ++A T
Sbjct: 634 WVLTKLNQVAGAMSDNLDHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADT 692

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              V V V+ +   LL  F+P +  +++  L  + E    QS
Sbjct: 693 ARRVLVYVLDKALKLLHPFMPFITEELYQALPGSAETIMTQS 734



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 31/186 (16%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69
           PN   Q H+GHA +  + D+L R  R+ G   L+  GTD        K+ +A +  G+T 
Sbjct: 45  PNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 104

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKK 112
           ++        F + A      Y + I +  K+   +C                 + ++ +
Sbjct: 105 EMV---GRDGFLERAWAWKTKYGNRIVSQLKKLGSSCDWERERFTMDEGCSEAVKEVFVR 161

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           + DKG IY+G     +        +D EV Y+  DG +++  + PV+   E G    L+ 
Sbjct: 162 LYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLY-PVK---ETGEMLELAT 217

Query: 172 YQDKLL 177
            + + +
Sbjct: 218 TRPETM 223


>gi|227871839|ref|ZP_03990240.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227842311|gb|EEJ52540.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 69

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/68 (58%), Positives = 52/68 (76%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          E++  YI+TAIAY + +PHIG+ YE+I+AD +ARF R +G DV F TGTDEHGQKI   A
Sbjct: 2  EKKPYYITTAIAYASGKPHIGNTYEIILADAIARFKRYEGYDVFFMTGTDEHGQKIEGKA 61

Query: 63 QNAGVTTK 70
          ++AG T K
Sbjct: 62 KDAGKTPK 69


>gi|804996|emb|CAA89153.1| orf [Homo sapiens]
          Length = 478

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+++ GLK   ++R    WG  +P +     + YVW DA   YL+ T  Y D  +    +
Sbjct: 62  SWLRDGLKPRCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWE----R 116

Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSL 307
           +W     V     + KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS 
Sbjct: 117 WWKNPEQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSR 176

Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  V   +     +  D  R++L+     G+D  +    L  + N++L N +GN ++R+ 
Sbjct: 177 GVGVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAG 236

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             + K + G +P     T  D+ +L   +  LQ   + ++   I  AL  ++++    ++
Sbjct: 237 MFVSKFFGGYVPE-MVLTPDDQRLLGHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQ 295

Query: 427 YFDAQKPWE-LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Y    +PW+ +K +  D  RA TV  + V +   L+++LQ ++P ++  I
Sbjct: 296 YIQVNEPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATI 345


>gi|289577959|ref|YP_003476586.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527672|gb|ADD02024.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 879

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 47/323 (14%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226
           ER  ++ +     +KD  +SR+ + WG +IP               DPQ           
Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPQKCEACGSTNIH 444

Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
               ++  W  +     +T G+ +     K  F+P D+ V G DI+ F    W A ++  
Sbjct: 445 QDEDVLDTWFSSALWPFSTMGWPEETQDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L   K+V     ++H      +G K+SKSLGN IDP+EVIEE G D LR+ LV   A G
Sbjct: 500 SLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNAPG 559

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  + +D  K  ++ + AN + N  SR V + L D D  + T G  T +D+ IL+  + 
Sbjct: 560 NDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNS 615

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++E+ EN++   +  A  ++   V SE  D Y +  KP  L   N +       V   V
Sbjct: 616 IVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYV 674

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F+P +  +I+  L
Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697


>gi|312135290|ref|YP_004002628.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775341|gb|ADQ04828.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 874

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 18/229 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFIL-HKGEKISKSL 307
           F+P D+ V   DI+ F    W A ++ + L      P  K V  HG +   +G K+SKSL
Sbjct: 472 FYPTDVLVTAYDIIFF----WVARMIFSGLEHMGKEPF-KYVLIHGIVRDAQGRKMSKSL 526

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP+EVIE+ G DALR+ LV  I+ G D  +  +  K   N + AN I N  +R V 
Sbjct: 527 GNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHME--KVEANRNFANKIWN-AARFVL 583

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           M L       P    FT ++  ILS    ++ E+ EN++   I  A  ++   + +   D
Sbjct: 584 MNLDIDTSFKPDESKFTFTERWILSRLDTLISEVTENLEKFEIGIAAQKLYDFIWDEFCD 643

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y +  KP  L          V YV + V+  +  LL  F+P +  +I+
Sbjct: 644 WYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILKLLHPFMPFVTEEIY 691


>gi|160944580|ref|ZP_02091808.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444362|gb|EDP21366.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103338|emb|CBL00882.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 901

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 20/269 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP   +  W  +     +T G+ +        F+P +  V G DI+ F    W + 
Sbjct: 465 KLTRDPD-TLDTWFSSALWPFSTLGWPNEDSADLKYFYPTNTLVTGYDIIGF----WVSR 519

Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + L    K     V  HG +   +G K+SKSLGN IDP+EVI + G DALR+ LV  
Sbjct: 520 MIFSGLAYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDG 579

Query: 333 IACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              G D  Y    ++K+V A  + AN + N     +  + +D++  +P       SD+ +
Sbjct: 580 STPGNDMRY----IEKKVEAARNFANKLWNATRFVLMNLPEDFEPGLPCEELLDMSDKWV 635

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448
           L+  ++V   + +N+++  +  A A++ S + +V  D + +  KP  L   +  +A T  
Sbjct: 636 LTKLNQVAGAMTDNLEHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAQQADTAR 694

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V V V+ +   LL  F+P +  +++  L
Sbjct: 695 RVLVYVLDKALKLLHPFMPFITEELYQAL 723



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 31/186 (16%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT 69
           PN   Q H+GHA +  + D+L R  R+ G   L+  GTD        K+ +A +  G+T 
Sbjct: 45  PNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKVVEAMRAEGLTK 104

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKK 112
           ++        F + A      Y + I +  K+   +C                 + ++ +
Sbjct: 105 EMV---GRDGFLERAWAWKTKYGNRIVSQLKKLGSSCDWERERFTMDEGCSEAVKEVFVR 161

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           + DKG IY+G     +        +D EV Y+  DG +++  + PV+   E G    L+ 
Sbjct: 162 LYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLY-PVK---ETGEMLELAT 217

Query: 172 YQDKLL 177
            + + +
Sbjct: 218 TRPETM 223


>gi|146297043|ref|YP_001180814.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410619|gb|ABP67623.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 874

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 17/253 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA-FLLSANLPLPK 288
            W  +     +T G+ +  +  K  F+P D+ V   DI+ F    W A  + SA   + K
Sbjct: 448 TWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTAYDIIFF----WVARMIFSAVEHMGK 502

Query: 289 KVFS----HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           + F     HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ LV  I+ G D  +  
Sbjct: 503 EPFKYVLIHGIVRDAQGRKMSKSLGNGIDPLEIIEKYGADALRFTLVTGISPGNDTRFHM 562

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +  K   N + AN I N  +R V M L       P    FT ++  ILS    +++E+ E
Sbjct: 563 E--KVEANRNFANKIWN-AARFVIMNLDIDTNYKPDESKFTFTERWILSRLDTLIKEVTE 619

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           N++   I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  L
Sbjct: 620 NLEKFEIGIAAQKLYDFIWDEFCDWYIEMSKP-ILYNKEAENNKEVQYVLLTVLTNILKL 678

Query: 462 LQAFVPKLANKIF 474
           L  F+P +  +I+
Sbjct: 679 LHPFMPFVTEEIY 691



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   Q H+GHA    I D+L RF R+ G   L+  GTD        KI +  +
Sbjct: 36  TIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWVPGTDHASIATEAKIVEKMK 95

Query: 64  NAGVTTKVF 72
             G+T ++ 
Sbjct: 96  EEGLTKEMI 104


>gi|149513066|ref|XP_001515174.1| PREDICTED: similar to Methionine-tRNA synthetase, partial
           [Ornithorhynchus anatinus]
          Length = 761

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 173/401 (43%), Gaps = 48/401 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      
Sbjct: 369 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYARLRQWNTLYVCGTDEYGTATETK 427

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+       +     IS+D F RTT  +     + +++++  +G ++ 
Sbjct: 428 AMEEGLTPQQICDKYHALHATIYRWFAISFDHFGRTTTPQQTTIAQDIFQRLLARGFLHT 487

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +     R   +  D  V        Y+ A G   +     +  +E +    ++    
Sbjct: 488 ATVAQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKICRST 547

Query: 174 DKLLSYYESHPEFILP-IERRNE-------------------VISFVKSGLKDLSLSRKT 213
            ++ S    H    LP +E+R E                     S+++ GLK   ++R  
Sbjct: 548 PEVKS--SRHLFLDLPQLEKRLEPWLTKTLAASDWTPNARFITRSWLRDGLKPRCITRD- 604

Query: 214 FDWGIKIP--DDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHV-----IGK 265
             WG  +P  D  + + YVW DA   YL+ T  Y D  +    ++W     V     + K
Sbjct: 605 LQWGTPVPLEDFQEKVFYVWFDAPIGYLSITATYTDQWE----RWWKNPEQVELYQFMAK 660

Query: 266 DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  V   +     +  
Sbjct: 661 DNVPFHSVVFPCSLLGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQGTGIPA 720

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           D  R++L+     G+D  +    L+ + N++L N +GN ++
Sbjct: 721 DIWRFYLLFVRPEGQDSAFSWADLQLKNNSELLNNLGNFIN 761


>gi|315056245|ref|XP_003177497.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339343|gb|EFQ98545.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 609

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 107/515 (20%), Positives = 206/515 (40%), Gaps = 53/515 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ + N  PH+G+    +++ D  AR+ R  G++ L+  GTDE+G      A
Sbjct: 17  KRNILITSALPFVNNVPHLGNIIGSVLSGDAFARYCRGRGINTLYVGGTDEYGTTTEAKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+      ++ +  +IS+D F RTT +   D  + ++ K+   G + + 
Sbjct: 77  FVEKCTPQELCDKYHAIHAEVYEWFNISFDIFGRTTTQLQTDITQDIFLKLEKNGFLKER 136

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME------------- 161
             +  Y     ++  D  V        Y  A G   +     ++ ++             
Sbjct: 137 MTTQLYCQEHHSFLADRFVEGECPVCGYTDARGDQCDLCGQLLESLQLKHPRCKIDGSKP 196

Query: 162 ----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDW 216
                +  F  L   Q  + +++               + S ++K GLK  S++R    W
Sbjct: 197 ITKDTKHIFLELDKLQSNIETFFRDSAASGAWSNNSTVITSAWLKEGLKPRSITRD-IRW 255

Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV---IGKDIL 268
           G ++P  P Y   ++Y W DA   Y++ T    +  G   K+W  P D+ +   IGKD +
Sbjct: 256 GTRVPL-PGYEEKVIYSWFDACIGYVSITAQYTDQWG---KWWRNPEDVQLYQFIGKDNV 311

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRY 327
            FH+  W              + +  ++ ++G K SKS G  V         +  D  R 
Sbjct: 312 VFHSDTWTKL---------HHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGISADIWRC 362

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTE- 385
            L+       D  +  D      N  L    GN VSR +  +  + Y+ ++P    + E 
Sbjct: 363 CLLSHRPEAGDSEFTWDAFINCNNNLLLKKFGNFVSRVLKFVNSRHYNNIVPNWTEYRED 422

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           S ++     +++L +  +      I  A + V+ +    + +  + K    L +  P + 
Sbjct: 423 SFDTFKEEINKLLAQYIQEFDAVKIRPAWSTVLQISQLGNGFLQSNKLDNSLAENEPSKC 482

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + V+ +    +  LA ++  ++P  A  I   L V
Sbjct: 483 AAVIGIAANTVHLLASIIAPYMPDTAKSINSQLCV 517


>gi|325263634|ref|ZP_08130368.1| valine--tRNA ligase [Clostridium sp. D5]
 gi|324031343|gb|EGB92624.1| valine--tRNA ligase [Clostridium sp. D5]
          Length = 882

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  F  +   P  
Sbjct: 452 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGFEHTGKSPF- 509

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             V  HG +   +G K+SKSLGN IDP+E+I++ G DALR  LV   A G D  FY++  
Sbjct: 510 HTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQYGADALRLTLVTGNAPGNDMRFYNERV 569

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              R   + AN + N  SR + M +++     P      E+D+ ILS  + + +++ ENM
Sbjct: 570 ESSR---NFANKVWN-ASRFILMNIENETLTQPETTELAEADKWILSKVNTLAKDVTENM 625

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAIL 461
               +  A+ +V   V +   D Y +  K + +  K+ NP  A+  L+    V+ Q   +
Sbjct: 626 DKFELGIAVQKVYDFVWDEFCDWYIEMAK-YRIYHKEENPQAANCALWTLKTVLGQALKM 684

Query: 462 LQAFVPKLANKIFDILFVADEN 483
           L  F+P +  +I+  L   +E+
Sbjct: 685 LHPFMPFVTEEIYKALVPEEES 706



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R K   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD
Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84


>gi|238927599|ref|ZP_04659359.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884524|gb|EEQ48162.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 887

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 22/241 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLG 308
           F+P  + V G DI+ F    W A ++   L        + VF HG +   +G K+SKSLG
Sbjct: 480 FYPTSVLVTGYDIIFF----WVARMVMMGLRFGGDVPFRDVFIHGLVRDSEGRKMSKSLG 535

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVIE+ G D LR+ L+     G D  FY      +RV A  + AN I N  SR 
Sbjct: 536 NGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFY-----WERVEAARNFANKIWN-ASRY 589

Query: 366 VSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSE 423
           + M L+  D   +PT   +T +D  ILS      +++  N+++  +  A   +   L SE
Sbjct: 590 MLMNLEGSDASFVPTAEDYTLADRWILSRAEETTRDVTANLEHYELGEAGRTIYEFLWSE 649

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  K     K N    +T LYV   V+ +   LL  F+P L  +I+  L  A E
Sbjct: 650 FCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTMRLLHPFMPFLTEEIWQKLPHAGE 709

Query: 483 N 483
           +
Sbjct: 710 S 710



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D  G     K+  A +
Sbjct: 44  SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAKVEAALR 103

Query: 64  NAGVT 68
             G T
Sbjct: 104 EEGTT 108


>gi|304438334|ref|ZP_07398275.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368700|gb|EFM22384.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 887

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 22/241 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLG 308
           F+P  + V G DI+ F    W A ++   L        + VF HG +   +G K+SKSLG
Sbjct: 480 FYPTSVLVTGYDIIFF----WVARMVMMGLRFGGDVPFRDVFIHGLVRDSEGRKMSKSLG 535

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVIE+ G D LR+ L+     G D  FY      +RV A  + AN I N  SR 
Sbjct: 536 NGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFY-----WERVEAARNFANKIWN-ASRY 589

Query: 366 VSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSE 423
           + M L+  D   +PT   +T +D  ILS      +++  N+++  +  A   +   L SE
Sbjct: 590 MLMNLEGSDASFVPTAEDYTLADRWILSRAEETTRDVTANLEHYELGEAGRTIYEFLWSE 649

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  K     K N    +T LYV   V+ +   LL  F+P L  +I+  L  A E
Sbjct: 650 FCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTMRLLHPFMPFLTEEIWQKLPHAGE 709

Query: 483 N 483
           +
Sbjct: 710 S 710



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D  G     K+  A +
Sbjct: 44  SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAKVEAALR 103

Query: 64  NAGVT 68
             G T
Sbjct: 104 EEGTT 108


>gi|225574666|ref|ZP_03783276.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038134|gb|EEG48380.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM
           10507]
          Length = 739

 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + A   +   P    V  HG +   +G K+SKSLGN I
Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGKTPF-HHVLIHGLVRDSQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           DP+EVI++ G DALR  LV   A G D  FY +   K   + + AN + N  SR + M L
Sbjct: 535 DPLEVIDKYGADALRLTLVTGNAPGNDMRFYWE---KVEASRNFANKVWN-ASRFILMNL 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYF 428
           +      P        D  ILS  + V QE+ ENM+   +  A+ ++   + +V  D Y 
Sbjct: 591 EGKTVTEPDLAQLNPEDRWILSKLNTVAQEVTENMEKYELGIAVQKIYDFLWDVFCDWYI 650

Query: 429 DAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   W+ ++  P  A+  L+    V+ +   LL  F+P +  +I+  L   +E+
Sbjct: 651 EMAKVRIWKAEEA-PKEANDALWTLRTVLTEGLKLLHPFMPFITEEIYCALLPQEES 706


>gi|326429852|gb|EGD75422.1| methionyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 494

 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 46/443 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV ARF RL   + LF  GTDE+G    
Sbjct: 11  IKGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARFCRLRDYNTLFICGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGD 118
             A   G+  K   D+     +++ D  +IS+D F RT TEK+   T  I W      G 
Sbjct: 71  TKAIAEGLEPKQICDKYHAIHKEVYDWFNISFDYFGRTSTEKQTEVTQEIFW-ACHKNGF 129

Query: 119 IYKGCYSGWYSLRDEAYYND--------DEVYKGADGQYYNAQHNPV------------- 157
           I +     WY    +++  D        D  Y  A G   +   +P+             
Sbjct: 130 ITQKDEEQWYCESCDSFLADRFVEGTCPDCGYTDARGDQCDECGHPLHAHQLKDPRCKYR 189

Query: 158 -------QWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSL 209
                  Q       +  L   Q ++ +Y+    E  +     ++   S+   GL+  ++
Sbjct: 190 KDCGKTPQLRTSTHLYLCLDKLQPEMQAYFAQAVEKGVWSANAQDITQSWFDRGLEPRAI 249

Query: 210 SRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHV--- 262
           +R    WG  +P +     + YVW DA   Y++ T    N      ++W  P D+ +   
Sbjct: 250 TRD-LKWGTPVPLEGFTDKVFYVWFDATIGYISITA---NYTDEWQQWWRNPDDVQLYQF 305

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE- 319
           + KD + FH+I +P+ L+       K   + +  ++ ++  + SKS G  +      E  
Sbjct: 306 MAKDNVLFHSIIFPSSLIGTRETWTKVNHLSATEYLNYEDRQFSKSRGVGVFGNNAQESG 365

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +D   L  + N +L N +GN V R+++   K +D  +  
Sbjct: 366 IPADVYRFYLLYIRPETADTHFDWADLIAKHNNELLNNLGNFVHRALTFSAKFFDSKMTQ 425

Query: 380 PGAFTESDESILSVCSRVLQEIR 402
                E  ESI ++   V Q+ +
Sbjct: 426 VVLTDEDKESIAAINEEVGQQAK 448


>gi|153852712|ref|ZP_01994149.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
 gi|149754354|gb|EDM64285.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
          Length = 886

 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 47/367 (12%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  V+ M ++ +F ++       +   ++     +P ER N++       ++D  +SR+ 
Sbjct: 351 HTTVEPMIKQQWFVKMEELAKPAIEAIKNGDLRFVP-ERFNKIYLHWLENIRDWCISRQI 409

Query: 214 FDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
           + WG +IP                               +  +  W  +     +T G+ 
Sbjct: 410 W-WGHRIPAYYCDECGEVVVGHGAPEKCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWP 468

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           D  +     F+P D+ V G DI+ F  I   +  +  +   P    VF HG +   +G K
Sbjct: 469 DQTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPF-HTVFIHGLVRDSQGRK 526

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIG 359
           +SKSLGN IDP+E+I++ G DALR  L+   A G D  FY+     +RV A  + AN + 
Sbjct: 527 MSKSLGNGIDPLEIIDQYGADALRMTLMTGNAPGNDMRFYN-----ERVEASRNFANKVW 581

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR + M L + +   P       +D  I+S C+ +++++ ENM    +  AL+++  
Sbjct: 582 N-ASRFIMMNLDEKELKKPANFEKRPADCWIMSKCNSLVKDVTENMDKFELGIALSKIYD 640

Query: 420 LVSE--VDRYFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +   D Y + A+ P      + + A+  L+   EV+++   LL  ++P +  +I+  
Sbjct: 641 FMWDEFCDWYIEMAKYPIYHADEDQEAANAALWTLREVLKKSLKLLHPYMPFVTEEIYSK 700

Query: 477 LFVADEN 483
           L   +E+
Sbjct: 701 LVPEEES 707



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R K   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTD 84


>gi|219670367|ref|YP_002460802.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219540627|gb|ACL22366.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 881

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 47/321 (14%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP+               ++  W  + 
Sbjct: 401 IRDWCISRQLW-WGHRIPVWYCEDCGAEICAKEDPETCPECGSKHIVQDPDVLDTWFSSG 459

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KV 290
               +T G+ +     K +F+P  + V G+DI+ F    W A ++   L   K     KV
Sbjct: 460 LWPFSTMGWPEETPELK-QFYPTSVLVTGRDIIFF----WVARMVFMGLEFMKDVPFQKV 514

Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             HG +L  +G K+SKSLGN +DP+EVI++ G D LR+ L+     G D  +  + L+  
Sbjct: 515 MIHGLVLDAQGRKMSKSLGNGVDPLEVIDQYGADTLRFMLITGNTPGNDLRFHPERLEAT 574

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   AN I N  SR V + L+DY+      G     D  ILS   +   E+ E ++   
Sbjct: 575 RN--FANKIWN-ASRFVLLNLQDYEE--GPRGQLKLEDRWILSRYEKTAGEVTEALEQFD 629

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  A   +   +     D Y +  K     K +P+   TV  + +EV+     LL  ++P
Sbjct: 630 LGEAARLLYEFIWNEFCDWYIELAKGCLYDKEHPEARHTVQSILLEVLEGTMRLLHPYMP 689

Query: 468 KLANKIFDILFVADENRCFQS 488
            +  +I+  L ++ E+   QS
Sbjct: 690 FITEEIWHNLPISGESIMIQS 710



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 22/124 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQN-AGVTTKV 71
           H+GHA +  I D+L RF R+ G + L+  GTD  G        +++AK   N   +  + 
Sbjct: 55  HLGHAIDSTIQDILTRFKRMQGYNTLWLPGTDHAGIATQAKVEEQLAKEGTNRQALGREK 114

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+            ++  R +    D S + F  T ++   +  R ++  +  KG IY
Sbjct: 115 FLDRVWDWKKEYGGRITQQLRRLGASCDWSRERF--TMDEGCSEAVREVFVDLYHKGLIY 172

Query: 121 KGCY 124
           +G Y
Sbjct: 173 RGNY 176


>gi|33303731|gb|AAP22264.1| methionyl-tRNA synthetase [Bacillus cereus]
 gi|33303733|gb|AAP22265.1| methionyl-tRNA synthetase [Bacillus cereus]
 gi|33303735|gb|AAP22266.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 299

 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%)

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK    
Sbjct: 3   GVTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVE 62

Query: 126 GWYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE------------- 162
             Y      +  D           E  +G      +A  +P+  +E+             
Sbjct: 63  QAYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQE 122

Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGI 218
            E ++F L  +Q+++ +  E+  +      R N +     +VK GL+D ++SR     G+
Sbjct: 123 TEHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 179

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + F
Sbjct: 180 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPF 237

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 238 HSVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 297

Query: 330 V 330
            
Sbjct: 298 T 298


>gi|89895934|ref|YP_519421.1| valyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89335382|dbj|BAE84977.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 881

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 47/321 (14%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP+               ++  W  + 
Sbjct: 401 IRDWCISRQLW-WGHRIPVWYCEDCGAEICAKEDPETCPECGSKHIVQDPDVLDTWFSSG 459

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KV 290
               +T G+ +     K +F+P  + V G+DI+ F    W A ++   L   K     KV
Sbjct: 460 LWPFSTMGWPEETPELK-QFYPTSVLVTGRDIIFF----WVARMVFMGLEFMKDMPFQKV 514

Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             HG +L  +G K+SKSLGN +DP+EVI++ G D LR+ L+     G D  +  + L+  
Sbjct: 515 MIHGLVLDAQGRKMSKSLGNGVDPLEVIDQYGADTLRFMLITGNTPGNDLRFHPERLEAT 574

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   AN I N  SR V + L+DY+      G     D  ILS   +   E+ E ++   
Sbjct: 575 RN--FANKIWN-ASRFVLLNLQDYEE--GPRGQLKLEDRWILSRYEKTAGEVTEALEKFD 629

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  A   +   +     D Y +  K     K +P+   TV  + +EV+     LL  ++P
Sbjct: 630 LGEAARLLYEFIWNEFCDWYIELAKGRLYDKEHPEARHTVQSILLEVLEGTMRLLHPYMP 689

Query: 468 KLANKIFDILFVADENRCFQS 488
            +  +I+  L ++ E+   QS
Sbjct: 690 FITEEIWHNLPISGESIMIQS 710



 Score = 44.3 bits (103), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 22/124 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNA-GVTTKV 71
           H+GHA +  I D+L RF R+ G + L+  GTD  G        +++AK   N   +  + 
Sbjct: 55  HLGHAIDSTIQDILTRFKRMQGYNTLWLPGTDHAGIATQAKVEEQLAKEGTNRHALGREK 114

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+            ++  R +    D S + F  T ++   +  R ++  +  KG IY
Sbjct: 115 FLDRVWDWKKEYGGRITQQLRRLGASCDWSRERF--TMDEGCSEAVREVFVDLYHKGLIY 172

Query: 121 KGCY 124
           +G Y
Sbjct: 173 RGNY 176


>gi|313126424|ref|YP_004036694.1| isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312292789|gb|ADQ67249.1| Isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 1044

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 28/270 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYW 275
           ++PD    +  VWID+    + T G LD P G++  F   WPADL V   D  R    +W
Sbjct: 517 RVPD----VFDVWIDS---SVATWGTLDYP-GNETDFEELWPADLIVEAHDQTR--GWFW 566

Query: 276 PAFLL--SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
               +  +A   +P ++V  HGF     G K+SKSLGN++ P E I+  G D LR +L+ 
Sbjct: 567 SQLGMGTAARGEIPYEEVLMHGFANDENGRKMSKSLGNIVTPEEAIDRAGRDPLRAYLLS 626

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIP--TPGAFTESDE 388
               G D  +D DGL    +A   N   N+    +  M L  YD   P  + G  +  DE
Sbjct: 627 HDQQGVDLSFDWDGLADTQSA--LNIFWNVFRFPLPYMELDGYDPANPDLSAGELSVVDE 684

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRA 444
            +LS    V  ++ +   +  +H AL  ++  V+E V R++     ++ WE + +   R 
Sbjct: 685 WVLSRLQTVKADVADAWDDYEVHDALNAILDFVTEDVSRFYVKAIRERMWEEEDSESKRG 744

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +     T  V+ +   L+  F P +A +++
Sbjct: 745 AYATLAT--VLNETVQLIAPFTPYVAERMY 772



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK--- 70
           Y + Q H+G A+   + D + R+ R+ G  V    G D HG  I  K  +  G  TK   
Sbjct: 48  YTSGQMHLGTAWNKTLKDAIIRYKRMTGHRVTDRPGYDMHGLPIEVKVEEELGFETKRDI 107

Query: 71  ------VFVDQ----NSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
                  F+D+      RN   M D        + +DD  +T    + +     + +++D
Sbjct: 108 EEYGMESFIDECKSFAERNREAMDDDFQSIGVWMDWDDPYKTLSPEYMEAAWWAFDQVAD 167

Query: 116 KGDIYKGCYSGWYSLR 131
           +G + +G  S  Y  R
Sbjct: 168 RGLVERGKRSVNYCPR 183


>gi|33303729|gb|AAP22263.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 297

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%)

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK    
Sbjct: 1   GVTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVE 60

Query: 126 GWYSLRDEAYYND----------DEVYKGADGQYYNAQHNPVQWMEE------------- 162
             Y      +  D           E  +G      +A  +P+  +E+             
Sbjct: 61  QAYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQE 120

Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGI 218
            E ++F L  +Q+++ +  E+  +      R N +     +VK GL+D ++SR     G+
Sbjct: 121 TEHFYFALHTFQEQIKTAVENVKQ--TGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGV 177

Query: 219 KIP----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPAD---LHVIGKDILRF 270
            IP    +D +  +YVWI+A+T Y + + +     G    +FW ++    +V GKD + F
Sbjct: 178 PIPVEGYEDKK--IYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPF 235

Query: 271 HAIYWPAFLLS-ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H++ WPA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL
Sbjct: 236 HSVIWPAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFL 295

Query: 330 V 330
            
Sbjct: 296 T 296


>gi|156043243|ref|XP_001588178.1| hypothetical protein SS1G_10624 [Sclerotinia sclerotiorum 1980]
 gi|154695012|gb|EDN94750.1| hypothetical protein SS1G_10624 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 646

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 116/516 (22%), Positives = 213/516 (41%), Gaps = 51/516 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G     
Sbjct: 11  KGKNNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATEV 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T K   D+  +  +D+ D  +I +D F RTT  +     + ++ K+   G + 
Sbjct: 71  KALETKQTPKELCDEFHKKHKDVYDWFEIGFDYFGRTTTDQQTVIAQDIFMKLHKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH----------------NPVQWM--- 160
           +   +  Y    +++  D  V       QY +A+                 NPV  +   
Sbjct: 131 ERTTTQPYCEAHKSFLADRFVEGTCPKCQYDDARGDQCDKCGSLLDALELINPVCKVDGA 190

Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E +  F  L   Q  +  ++ +S  E   P    +   S++K GL+  S++R   
Sbjct: 191 TPVPRETKHIFLLLDKAQPAIEEWFNKSSEEGGWPKNGISITNSWLKQGLQGRSITRD-L 249

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVIG 264
            WG  I +P   + ++YVW DA   Y + T         +  NP+  K          +G
Sbjct: 250 KWGTPIPLPGFEEKVLYVWFDACIGYPSITANYTKDWELWWRNPENVKL------YQFMG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVG 321
           KD + FH + +P   L       K   + +  ++ ++  K SKS G  V         V 
Sbjct: 304 KDNVPFHTVIFPGSQLGTGDKWTKLNHLSTTEYLNYENGKFSKSRGVGVFGDTAKDTGVP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--T 379
               RY+L+       D  ++     +  N+ L N +GN V+R +  +    DG+IP  +
Sbjct: 364 PSVWRYYLLSNRPETADSQFEWSNFIQLNNSVLLNNLGNFVNRVIKFVNAKMDGVIPEFS 423

Query: 380 PGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P    ES +  + +   +  L++   +M+   I   L QV+ + +  +     +      
Sbjct: 424 PEYKDESFDFPAFIEEINVQLKDYNNDMEAVKIRAGLDQVMKISTSGNNLLQYRLDNANL 483

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +P+R  TV+ + + +   +A +   F+P  +  I
Sbjct: 484 AEHPERTHTVIGLALNLAYLIASITSPFMPSTSESI 519


>gi|297544234|ref|YP_003676536.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842009|gb|ADH60525.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 879

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 47/323 (14%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226
           ER  ++ +     ++D  +SR+ + WG +IP               DPQ           
Sbjct: 386 ERFEKIYTNWLENIRDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPQKCEACGSSHIH 444

Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
               ++  W  +     +T G+ +     K  F+P D+ V G DI+ F    W A ++  
Sbjct: 445 QDEDVLDTWFSSALWPFSTMGWPEETQDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L   K+V     ++H      +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G
Sbjct: 500 SLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  + +D  K  ++ + AN + N  SR V + L D D  + T G  T +D+ IL+  + 
Sbjct: 560 NDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNN 615

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++E+ EN++   +  A  ++   V SE  D Y +  KP  L   N +       V   V
Sbjct: 616 IVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYV 674

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F+P +  +I+  L
Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697


>gi|154316456|ref|XP_001557549.1| hypothetical protein BC1G_04159 [Botryotinia fuckeliana B05.10]
 gi|150845959|gb|EDN21152.1| hypothetical protein BC1G_04159 [Botryotinia fuckeliana B05.10]
          Length = 642

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 214/521 (41%), Gaps = 53/521 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G     
Sbjct: 11  KGKNNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATEV 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T K   D+  +  +D+ D  +I +D F RTT ++     + ++ K+   G + 
Sbjct: 71  KALETKQTPKELCDEFHKKHKDVYDWFEIGFDYFGRTTTEQQTIIAQDIFMKLHKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH----------------NPVQWM--- 160
           +   +  Y  + +++  D  V       QY +A+                 NPV  +   
Sbjct: 131 ERTTTQPYCEKHQSFLADRFVEGTCPKCQYDDARGDQCDKCGSLLDALELINPVCKVDGA 190

Query: 161 -----EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E +  F  L   Q  +  ++ +S  E   P    +   S++K GL+  S++R   
Sbjct: 191 TPIPRETKHIFLLLDKAQPAIEEWFNKSSEEGGWPKNGISITNSWLKQGLQGRSITRD-L 249

Query: 215 DWGIKIPDDPQY---IMYVWIDALTNYLTTTG--------YLDNPDGSKAKFWPADLHVI 263
            WG  IP  P Y   ++YVW DA   Y + T         +  +P+  K          +
Sbjct: 250 KWGTPIPL-PGYENKVLYVWFDACIGYPSITANYTKDWELWWRDPENVKL------YQFM 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEV 320
           GKD + FH + +P   L       K   + +  ++ ++  K SKS G  V         V
Sbjct: 303 GKDNVPFHTVIFPGSQLGTGDKWTKLNHLSTTEYLNYENGKFSKSRGVGVFGDTAKDTGV 362

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-- 378
                RY+L+       D  ++     +  N+ L N +GN V+R V  +    DG+IP  
Sbjct: 363 PPSVWRYYLLSNRPETADSQFEWANFIQLNNSVLLNNLGNFVNRVVKFVNAKMDGVIPEF 422

Query: 379 TPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P    E     + +   +  L++   +M+   I   L QV+ + +  +     +     
Sbjct: 423 SPEYKDEKFDAPAFIEEINAQLKDYNSDMEAVKIRVGLDQVMKISTSGNNLLQYRLDNAN 482

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +P+R  TV+ + + +   +A +   F+P  +  I   L
Sbjct: 483 LAEHPERTHTVIGLALNLAYLIASITSPFMPSTSESIVSQL 523


>gi|160933630|ref|ZP_02081018.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
 gi|156867507|gb|EDO60879.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
          Length = 874

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308
           F+P D  V G DI+ F    W A ++ + L     +P K VF HG +   +G K+SKSLG
Sbjct: 476 FYPTDTLVTGYDIIFF----WVARMIFSGLEHMGDIPFKTVFFHGLVRDAQGRKMSKSLG 531

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDPIEVIE+ G DALR+ LV   + G D  + ++ L+   N   AN I N  +R + M
Sbjct: 532 NGIDPIEVIEKYGADALRFTLVTGNSPGNDMRFTEEKLESSRN--FANKIWN-AARFIHM 588

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +  +D     P + T  D+ I+S  + V +E+ EN++   +  A+ ++   + +   D 
Sbjct: 589 NIDGFDVKNELPESLTLEDQWIVSALNTVTKEVTENLEKYELGIAVQKLYDFIWDQFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K   + K   + +     V V     +  L+  F+P +  +I+  +
Sbjct: 649 YIELAKTRLMAKD--ETSVGARQVLVWTFTSILKLMHPFMPYITEEIWQTM 697



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   +  I  PN   Q H+GHA +  I D+L RF R+ G   L+  GTD        KI
Sbjct: 35  EKKPYTIVIPPPNITGQLHMGHALDETIQDILIRFKRMQGYSALWLPGTDHASIATEAKI 94

Query: 59  AKAAQNAGVT 68
            +A +  G+T
Sbjct: 95  VEAMKKEGLT 104


>gi|162447403|ref|YP_001620535.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985510|gb|ABX81159.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 859

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 39/304 (12%)

Query: 202 SGLKDLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTT 242
           + ++D ++SR+ + WG +IP            + P       + ++  W  +     +T 
Sbjct: 394 NNIQDWTISRQLW-WGHRIPAWFKGDEVKVQVESPGVDWTQDEDVLDTWFSSALWPFSTL 452

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL 297
           G+ +  D +  +++P D+ V G DI+ F    W A ++   L   KK     V  HG I 
Sbjct: 453 GWPNEDDPNFKRYYPTDVLVTGYDIIFF----WVARMMFQGLEFTKKDPFKTVLLHGLIR 508

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSL N +DP++VI++ GVDALR+F+V   A G+D  YD   ++   N    N
Sbjct: 509 DEQGRKMSKSLNNGVDPMDVIDKYGVDALRFFIVSNAAPGQDTRYDITKIESSWN--FIN 566

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + N ++R VS+ +KD   ++         D+ IL+  S  + E  +  +    + A   
Sbjct: 567 KLWN-ITRFVSLNIKD-KSLVIDEDRLNVFDKWILTRLSETITEADKYYERFEFNEASRV 624

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + + E   + Y +  K   +   +P        V + V++ +  LL  F+P + +K++
Sbjct: 625 LTNFIWEEFANWYLEISK---VSLQDPKIEQNTQAVLIYVLKDILKLLHPFLPFVTDKLY 681

Query: 475 DILF 478
             +F
Sbjct: 682 MDIF 685



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          K+  K   +  I  PN   + H+GHA++  I D++ R  R+ G D L+  G D  G
Sbjct: 32 KDLNKTPFTVVIPPPNVTGKLHLGHAWDTAIQDIIIRRKRMQGFDALYLPGMDHAG 87


>gi|158321063|ref|YP_001513570.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141262|gb|ABW19574.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 884

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 16/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAI--YWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P D+ V G DI+ F  +   +       
Sbjct: 450 VLDTWFSSALWPFSTLGW---PEATKELEYFYPTDVLVTGYDIIFFWVVRMAFSGLEFME 506

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           N+P  K VF HG +   +G K+SKSLGN IDP+E+I++ G DALR+ LV   + G D  +
Sbjct: 507 NVPF-KHVFLHGLVRDAEGRKMSKSLGNGIDPLEIIDQYGADALRFTLVTGNSPGNDMRF 565

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQE 400
             + L+   N   AN + N  +R V M L+ D+         FT +D+ I+S  ++V +E
Sbjct: 566 HMEKLESSRN--FANKLWN-ATRFVLMNLEVDHIEKSSVESNFTIADKWIISRMNKVAKE 622

Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + ENM    +  A+ ++   + SE  D Y +  KP  L   + +      Y    V+  +
Sbjct: 623 MTENMDKFELGIAVQKLYDFIWSEYCDWYIELVKP-RLYGEDTEAKRAAQYTLTYVLENI 681

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  F+P +  +I+  L
Sbjct: 682 LKLLHPFMPFITEEIWQNL 700


>gi|256751768|ref|ZP_05492641.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749296|gb|EEU62327.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 879

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 150/323 (46%), Gaps = 47/323 (14%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------- 226
           ER  ++ +     +KD  +SR+ + WG +IP               DP+           
Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIH 444

Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
               ++  W  +     +T G+ +  +  +  F+P D+ V G DI+ F    W A ++  
Sbjct: 445 QDEDVLDTWFSSALWPFSTMGWPEETEDLRY-FYPTDVLVTGYDIIFF----WVARMIFM 499

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L   K+V     ++H      +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G
Sbjct: 500 SLEFMKEVPFKHVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  + +D  K  ++ + AN + N  SR V + L D D  + T G  T +D+ IL+  + 
Sbjct: 560 NDMRFSQD--KVELSRNFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNN 615

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++E+ EN++   +  A  ++   V SE  D Y +  KP  L   N +       V   V
Sbjct: 616 IVKEVTENLEKFELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYV 674

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F+P +  +I+  L
Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697


>gi|282600751|ref|ZP_05979667.2| valine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571616|gb|EFB77151.1| valine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 926

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 151/361 (41%), Gaps = 47/361 (13%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H+ ++ M  + +F ++       +   E      +P       I+++K G +D  +SR+ 
Sbjct: 398 HSVIEPMVSKQWFVKMEPLAGPAIEAVEKGDIKFVPERFTKNYINWMKGG-RDWCISRQL 456

Query: 214 FDWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGY 244
           + WG +IP                              DP   +  W  +     +T G+
Sbjct: 457 W-WGHQIPAWYCDDCGETVVAKEAPSVCPKCGSTHLTQDPD-TLDTWFSSALWPFSTLGW 514

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-H 298
            D        F+P +  V G DI+ F    W + ++ + L    K     V  HG +   
Sbjct: 515 PDENAPDYNYFYPTNTLVTGYDIIGF----WVSRMIFSGLAYTGKAPFDTVLIHGIVRDS 570

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVI++ G DALR  L+     G D  Y  +  K   + + AN +
Sbjct: 571 QGRKMSKSLGNGIDPLEVIDQYGADALRMMLIVGSTAGNDMRYSDE--KVTASRNFANKL 628

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N     +  + +D+   +P       SD+ +LS  ++V  E   N+    +  A  +V 
Sbjct: 629 WNAARFVLMNLPEDFQPGMPEESLLDMSDKWVLSELAKVTAEATANLDKYELGLAAEKVE 688

Query: 419 SLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + + EV  D Y +  K   L   +  +A T   V V V+ +   LL  F+P +  +I+  
Sbjct: 689 NFIWEVYCDWYIEICKS-RLNSDDAVQADTARKVLVYVLDKALKLLHPFMPFITEEIYQA 747

Query: 477 L 477
           L
Sbjct: 748 L 748


>gi|320530417|ref|ZP_08031475.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137250|gb|EFW29174.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 887

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 123/265 (46%), Gaps = 27/265 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +      T G+   PD +K    F+P    V G DI+ F    W A ++   L
Sbjct: 453 VLDTWFSSGLWPFETMGW---PDDTKDLRHFYPTAALVTGYDIIFF----WVARMVMMGL 505

Query: 285 PLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   + VF HG +   +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D
Sbjct: 506 RFGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGND 565

Query: 339 -GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394
             FY      +RV A  + AN I N  SR + M  +  D   +P    +T +D  ILS C
Sbjct: 566 MRFY-----WERVEAARNFANKIWN-ASRYMLMNFEGADTSFVPAAEDYTLADRWILSRC 619

Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +   +++  N++   +  A   +   L SE  D Y +  K     K N    +T LYV  
Sbjct: 620 AVTARDVTANLEKYELGEAGRTIYEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLR 679

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+ +   LL  F+P L  +I+  L
Sbjct: 680 TVLERTLRLLHPFMPFLTEEIWQKL 704



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D           +AG+
Sbjct: 44  SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVIWVPGCD-----------HAGI 92

Query: 68  TTKVFVDQNSR 78
            T+  V+++ R
Sbjct: 93  ATQAKVEESLR 103


>gi|289449837|ref|YP_003474971.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184384|gb|ADC90809.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 885

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 16/235 (6%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+  D+ V   DI+ F    W A ++ + L   ++   H  ++H      +G K+SKSLG
Sbjct: 480 FYQTDVLVTAYDIIFF----WVARMIFSALAQTEQPPFHTVLIHGLVRDSQGRKMSKSLG 535

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+ VI+  G DALRY L++  + G D  Y ++  K        N I N     +  
Sbjct: 536 NGIDPLGVIDRYGADALRYSLIQGNSQGNDFRYQEE--KVEAGRAFVNKIWNATRFVLMN 593

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
             KDY G    P  F   D  ILS   +V+ EI +N+    +  ALA++ + + E   D 
Sbjct: 594 FPKDYTGK-HDPSKFLPEDAWILSRLQQVIGEINQNLDKYELGIALAKIYNFIWEEFCDW 652

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           Y +  KP       P R     YV  EV+  +  LL  F+P +  +++  L +++
Sbjct: 653 YIEMVKPRMNDAAAPSR-DEAFYVLNEVVTAVLKLLHPFMPFVTEELYKSLPLSE 706


>gi|197303308|ref|ZP_03168348.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
 gi|197297592|gb|EDY32152.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
          Length = 882

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 19/269 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  +  +   P  
Sbjct: 452 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPF- 509

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             V  HG +   +G K+SKSLGN IDP+E+I++ G DALR  L+   A G D  FY+   
Sbjct: 510 NTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQYGADALRLTLITGNAPGNDMRFYN--- 566

Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +RV A  + AN + N  SR + M +K+     P     T +D  ILS  + + +++ E
Sbjct: 567 --ERVEASRNFANKVWN-ASRFILMNMKENVVEKPEDALLTPADRWILSAVNTLAKDVTE 623

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           NM    +  A+ +V   + +   D Y +  K + +     D+A+   VL+V   V+ Q  
Sbjct: 624 NMDKFELGIAVQKVYDFIWDEFCDWYVELAK-YRIWHAEEDQAAANCVLWVLKTVLGQAL 682

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQS 488
            LL  F+P +  +I+  L   +E+    S
Sbjct: 683 KLLHPFMPFITEEIYLALVPEEESLMMSS 711



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R K   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD
Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84


>gi|307265322|ref|ZP_07546879.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919606|gb|EFN49823.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 879

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 47/312 (15%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             +KD  +SR+ + WG +IP               DP+               ++  W  
Sbjct: 397 ENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +     +T G+ +  +  +  F+P D+ V G DI+ F    W A ++  +L   K+V   
Sbjct: 456 SALWPFSTMGWPEETEDLRY-FYPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFK 510

Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             ++H      +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G D  + +D  K
Sbjct: 511 HVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQD--K 568

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             ++ + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++ 
Sbjct: 569 VELSRNFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEK 626

Query: 408 QLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  A  ++   V SE  D Y +  KP  L   N +       V   V+     LL  F
Sbjct: 627 FELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPF 685

Query: 466 VPKLANKIFDIL 477
           +P +  +I+  L
Sbjct: 686 MPFITEEIWQNL 697


>gi|188585735|ref|YP_001917280.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350422|gb|ACB84692.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 885

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 18/269 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D  D  + KF+P D+ V G DI+ F    W A ++  
Sbjct: 446 DPD-VLDTWFSSALWPFSTMGWPDETDDLQ-KFYPTDVLVTGYDIIFF----WVARMIFM 499

Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L   K+     VF HG +    G K+SKSLGN IDP+E+I+E G D LRY LV  I  G
Sbjct: 500 GLEFMKERPFDDVFIHGLVRDAHGRKMSKSLGNGIDPLEIIDEYGADTLRYTLVTGITPG 559

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVC 394
            D  +  D ++   N   AN I N  SR   M L +Y  M  +P     + +D+ IL   
Sbjct: 560 NDMRFSYDKVEASRN--FANKIWN-ASRFAIMNLDNYQPMELSPEDDRLSLADKWILHRM 616

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + V+ ++   M    +  A   +   + SE   ++       L + + +  S    + V 
Sbjct: 617 NEVIDDVTRLMDKYELGEASKTLYEFIWSEFCDWYIEMAKIRLYQGSEEEKSLTQEILVR 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
            +  +  LL  F+P L+ +I   L   DE
Sbjct: 677 GLDTILRLLHPFMPFLSEEIRSHLPHTDE 705



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 25/138 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAK-AA 62
           S  I  PN     H+GHA +  + DV+ RF R+ G D L+  GTD  G     K+ +  A
Sbjct: 40  SVVIPPPNVTGSLHMGHALDNTLQDVIVRFKRMQGYDTLWMPGTDHAGIATQTKVEEHLA 99

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           Q  GV+                 + + D  +   + +   +D S + F  T ++      
Sbjct: 100 QEDGVSKYDLGREKFLEKVWAWKETYHDSITNQLKKLGVSVDWSRERF--TMDEGCSKAV 157

Query: 107 RILWKKISDKGDIYKGCY 124
           R ++  + +KG IY+G Y
Sbjct: 158 REVFVSLYEKGLIYQGDY 175


>gi|296134048|ref|YP_003641295.1| valyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032626|gb|ADG83394.1| valyl-tRNA synthetase [Thermincola potens JR]
          Length = 883

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 10/228 (4%)

Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P  + V G+DI+ F    + + A      +P  ++VF HG +L  +G K+SKSLGN +
Sbjct: 478 FYPTSVLVTGRDIIFFWVARMIFMAMEFMKEVPF-REVFIHGLVLDAQGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVIE+ G D LR+ L+     G D  +  + L    N   AN I N  SR V M L+
Sbjct: 537 DPIEVIEKYGADTLRFMLITGNTPGNDLRFHFERLDNTRN--FANKIWN-ASRFVLMNLE 593

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           D+    P P  ++ +D+ I S  ++ ++ + + ++   +  A   +   +     D Y +
Sbjct: 594 DFKPGEP-PKDYSPADKWIKSRFNKTVKTVTDALEAYNLGEAAQSLYEFIWNEFCDWYIE 652

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             KP    K +P    T  YV   V+     LL  F+P +  +I+  L
Sbjct: 653 LVKPVLYGKESPAARYTAQYVLWSVLEGTMRLLHPFMPFITEEIWQHL 700


>gi|225026786|ref|ZP_03715978.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
 gi|224955905|gb|EEG37114.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
          Length = 880

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 175/413 (42%), Gaps = 73/413 (17%)

Query: 128 YSLRDEAYYNDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           ++L +    NDD       G++     Y A+   V+ +EE GY  R+  ++  + ++   
Sbjct: 290 HNLEEINILNDDGTINENGGKFEGMDRYEARKAIVKELEEGGYLVRIENHEHNVGTHDRC 349

Query: 183 HPE---------FILPIERRNEVISFVKSG-------------------LKDLSLSRKTF 214
           H           F+   E     I  VK+G                   ++D  +SR+ +
Sbjct: 350 HTTVEPMVKKQWFVKMNEMAKPAIEAVKNGDLRFVPGHFDRTYLHWLENIRDWCISRQLW 409

Query: 215 DWGIKIP----DDPQYIMY------------------------VWIDALTNYLTTTGYLD 246
            WG +IP    DD   I+                          W  +     +T G+ D
Sbjct: 410 -WGHRIPAYYCDDCGEIVVAKETPSVCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPD 468

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKI 303
             +     F+P ++ V G DI+ F  I   +  +  +   P    V  HG +   +G K+
Sbjct: 469 KTEDLDY-FYPTNVLVTGYDIIFFWVIRMVFSGYEQTGKCPF-SDVLIHGLVRDEQGRKM 526

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+E+I++ G DALR  LV   A G D  Y +  +    N   AN + N  S
Sbjct: 527 SKSLGNGIDPLEIIDQYGADALRLTLVTGNAPGNDMRYSEKKIIASRN--FANKVWN-AS 583

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R + M ++  D    +    T +D+ ILS  + +++E+ +NM+N     A++++   + E
Sbjct: 584 RFMLMNIEKADLSNVSLDDLTPADKWILSKANSLVKEVTDNMENYDFGVAVSKLNDFIWE 643

Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              D Y +  KP    + +  +A+  L+   +V+     LL  ++P +  +IF
Sbjct: 644 EFCDWYIEMVKPRLYNEEDTTKAA-ALFTLKKVLTISLKLLHPYMPFITEEIF 695



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          +R K   +  +  PN   Q H+GHA +  + D+L RF R+ G + L+  GTD      A 
Sbjct: 33 DRSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRFKRMQGYNALWQPGTDH-----AS 87

Query: 61 AAQNAGVTTKV 71
           A    VT K+
Sbjct: 88 IATEVKVTNKL 98


>gi|260888326|ref|ZP_05899589.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861862|gb|EEX76362.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 892

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 25/262 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ +     K +F+P  + V G DI+ F    W A ++   L  
Sbjct: 456 VLDTWFSSGLWPFETMGWPEETPELK-QFYPTSVLVTGYDIIFF----WVARMVMMGLEF 510

Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-G 339
            K      VF HG +   +G K+SKSLGN IDP+EVI++ G D LR+ L+     G D  
Sbjct: 511 GKDIPFHHVFIHGLVRDSEGRKMSKSLGNGIDPVEVIDKYGADTLRFMLITGNTPGNDMR 570

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSR 396
           FY      +RV A  + AN + N  SR + M L+D+D G  PT   +T +D  ILS C +
Sbjct: 571 FY-----WERVEAARNFANKLWN-ASRFMLMNLEDFDAGFTPTAEDYTLADRWILSRCQK 624

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452
               + +N++   +  A   +   + SE  D Y +  K     K      S  T  YV  
Sbjct: 625 TAAGVTQNLEKFELGEAGRMIYEFIWSEFCDWYIELAKARLYDKDAAGERSKKTAQYVLS 684

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            V+ +   LL  F+P L  +I+
Sbjct: 685 YVLERTLRLLHPFMPFLTEEIW 706



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QK 57
           E  K   S  I  PN   Q H+GHA +  + D+L R+ R+ G + L+  G D  G   Q 
Sbjct: 40  EEGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWRRMQGYNTLWMPGCDHAGIATQA 99

Query: 58  IAKAAQNAGVTTK 70
             +AA  A  T +
Sbjct: 100 KVEAALRAEGTNR 112


>gi|326390738|ref|ZP_08212292.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993275|gb|EGD51713.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 879

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 47/312 (15%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             +KD  +SR+ + WG +IP               DP+               ++  W  
Sbjct: 397 ENIKDWCISRQLW-WGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +     +T G+ +  +  +  F+P D+ V G DI+ F    W A ++  +L   K+V   
Sbjct: 456 SALWPFSTMGWPEETEDLRY-FYPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFK 510

Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             ++H      +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G D  + +D  K
Sbjct: 511 HVLIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQD--K 568

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             ++ + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++ 
Sbjct: 569 VELSRNFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEK 626

Query: 408 QLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  A  ++   V SE  D Y +  KP  L   N +       V   V+     LL  F
Sbjct: 627 FELGIAATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPF 685

Query: 466 VPKLANKIFDIL 477
           +P +  +I+  L
Sbjct: 686 MPFITEEIWQNL 697


>gi|313894948|ref|ZP_07828507.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976401|gb|EFR41857.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 887

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 27/265 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +      T G+   PD +K    F+P    V G DI+ F    W A ++   L
Sbjct: 453 VLDTWFSSGLWPFETMGW---PDDTKDLRHFYPTAALVTGYDIIFF----WVARMVMMGL 505

Query: 285 PLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   + +F HG +   +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D
Sbjct: 506 RFGGDVPFRDIFIHGLVRDSEGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGND 565

Query: 339 -GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394
             FY      +RV A  + AN I N  SR + M  +  D   +P    +T +D  ILS C
Sbjct: 566 MRFY-----WERVEAARNFANKIWN-ASRYMLMNFEGADTSFVPAAEDYTLADRWILSRC 619

Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +   +++  N++   +  A   +   L SE  D Y +  K     K N    +T LYV  
Sbjct: 620 AVTARDVTANLEKYELGEAGRTIYEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLR 679

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+ +   LL  F+P L  +I+  L
Sbjct: 680 TVLERTLRLLHPFMPFLTEEIWQKL 704



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D           +AG+
Sbjct: 44  SVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVIWVPGCD-----------HAGI 92

Query: 68  TTKVFVDQNSR 78
            T+  V+++ R
Sbjct: 93  ATQAKVEESLR 103


>gi|330838350|ref|YP_004412930.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746114|gb|AEB99470.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 886

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 25/262 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ +     K +F+P  + V G DI+ F    W A ++   L  
Sbjct: 450 VLDTWFSSGLWPFETMGWPEETPELK-QFYPTSVLVTGYDIIFF----WVARMVMMGLEF 504

Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-G 339
            K      VF HG +   +G K+SKSLGN IDP+EVI++ G D LR+ L+     G D  
Sbjct: 505 GKDIPFHHVFIHGLVRDSEGRKMSKSLGNGIDPVEVIDKYGADTLRFMLITGNTPGNDMR 564

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSR 396
           FY      +RV A  + AN + N  SR + M L+D+D G  PT   +T +D  ILS C +
Sbjct: 565 FY-----WERVEAARNFANKLWN-ASRFMLMNLEDFDAGFTPTAEDYTLADRWILSRCQK 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452
               + +N++   +  A   +   + SE  D Y +  K     K      S  T  YV  
Sbjct: 619 TAAGVTQNLEKFELGEAGRMIYEFIWSEFCDWYIELAKARLYDKDAAGERSKKTAQYVLS 678

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            V+ +   LL  F+P L  +I+
Sbjct: 679 YVLERTLRLLHPFMPFLTEEIW 700



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QK 57
           E  K   S  I  PN   Q H+GHA +  + D+L R+ R+ G + L+  G D  G   Q 
Sbjct: 34  EEGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWRRMQGYNTLWMPGCDHAGIATQA 93

Query: 58  IAKAAQNAGVTTK 70
             +AA  A  T +
Sbjct: 94  KVEAALRAEGTNR 106


>gi|257413958|ref|ZP_05591858.1| valine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201722|gb|EEV00007.1| valine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 651

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 17/257 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  +      P  
Sbjct: 221 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFH 279

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             +F HG +   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  FY    
Sbjct: 280 TVLF-HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFY---- 334

Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +RV A  + AN + N  SR + M L+  +   P+ G    +D+ ILS  + + +++ E
Sbjct: 335 -WERVEASRNFANKVWN-ASRFIMMNLEGSEIKEPSLGELKPADKWILSKVNTLAKDVTE 392

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAI 460
           NM    +  A+ +V   + +   D Y +  K     K N P  A+   +    V+ +   
Sbjct: 393 NMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNKENDPASANAAFWTLKTVLTEALK 452

Query: 461 LLQAFVPKLANKIFDIL 477
           LL  F+P +  +IF  L
Sbjct: 453 LLHPFMPFITEEIFCTL 469


>gi|317123025|ref|YP_004103028.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593005|gb|ADU52301.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 973

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 43/276 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+    +  +    +    I+P ER   V       ++D  +SR+ + WG +IP   
Sbjct: 408 WFIRMKPLAEPAMEAVRTGRTRIVP-ERFTRVYLHWLENVRDWCISRQIW-WGHRIPAWY 465

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP+               ++  W  +     +T G+ D       +F+
Sbjct: 466 CQRCGETVVAREDPERCPRCGSAELHQDEDVLDTWFSSALWPFSTLGWPDKDSPDLRRFY 525

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNV 310
           P  + V G DIL     +W A ++   L     +P + V  HG +   KG+K+SKS GNV
Sbjct: 526 PTSVLVTGYDIL----FFWVARMMVMGLEFMGDVPFRTVLLHGLVRDAKGQKMSKSRGNV 581

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVI++ G DALR+ LV  +A G D  +  +  +   + + AN + N  +R V M L
Sbjct: 582 VDPLEVIDKYGADALRFTLVTGLAPGNDARFSWE--RAEASRNFANKLWN-AARFVLMNL 638

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +D+D     P     +D  IL+    V  E++  ++
Sbjct: 639 QDFDPARGEPERDNAADRWILARLDAVTAEVQRLLE 674



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 22/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI--AKAA 62
           S  I  PN     HIGHA    + D+LAR+HR+ G   L+  GTD  G   Q +   + A
Sbjct: 85  SMVIPPPNVTGNLHIGHALNNTMQDILARWHRMQGDVTLWVPGTDHAGIATQHVVEVRLA 144

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD-DFIR-TTEKRHHDTCRI 108
           +  G+  +             + +Q   N       L  S D D +R T ++      R 
Sbjct: 145 KEEGLRRQDLGRERFLERVWAWKNQYEANILGQLRRLGASVDWDRLRFTMDEGCSRAVRE 204

Query: 109 LWKKISDKGDIYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++ +KG IY+G Y   W  +   A  + +  ++  +G+ Y+ ++
Sbjct: 205 VFVRLYEKGLIYRGDYMVNWCPVCHTALADIEVEHEEREGRLYHLRY 251


>gi|238917219|ref|YP_002930736.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872579|gb|ACR72289.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 920

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 153/347 (44%), Gaps = 56/347 (16%)

Query: 146 DGQYYNAQHNPVQWMEEEGYFF--RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           D  YYN   N   W      ++  R+ AY      Y +   E  +    R++V +  K G
Sbjct: 427 DKTYYNWTDNIRDWCISRQLWWGHRIPAY------YCKDCGEMTV---SRDKVCTCPKCG 477

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLH 261
             ++     T D               W  +     +T G+   PD +     F+P D+ 
Sbjct: 478 SANVEQDPDTLD--------------TWFSSALWPFSTLGW---PDKTPELDYFYPTDVL 520

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFS----HGFILH-KGEKISKSLGNVIDPIEV 316
           V G DI+ F  I     + S    + KK F     HG +   +G K+SKSLGN IDP+EV
Sbjct: 521 VTGYDIIFFWVI---RMIFSGYEHMGKKPFGKVLFHGLVRDDQGRKMSKSLGNGIDPLEV 577

Query: 317 IEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY 373
           I++ G DALRY L+   A G D  FY       RV A  + AN + N  SR + M   D 
Sbjct: 578 IDKYGADALRYTLITGNAPGNDMRFY-----WSRVEASRNFANKVWN-ASRFIMM--NDP 629

Query: 374 DGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           D  I      P   T++D+ ILS  + +++E+ +NM+   +  A+A++   + E   D Y
Sbjct: 630 DNKIKATDARPANLTDADKWILSKMNGLIKEVTDNMEKYELGIAVAKLNDFIWEEFCDWY 689

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  KP      +  + + +  +   +I  L  LL  ++P +  +IF
Sbjct: 690 IEMVKPRLYNDADETKTAAIWTLKTVLIDALK-LLHPYMPFITEEIF 735



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           R+K   +  +  PN   + H+GHA +  + D++ RF R+ G + L+  GTD        K
Sbjct: 71  RDKKPFTIVMPPPNITGKLHMGHALDNTMQDIIIRFKRMQGYEALWIPGTDHASISTEVK 130

Query: 58  IAKAAQNAGV 67
           +  A +  G+
Sbjct: 131 VTNALKEEGI 140


>gi|153814976|ref|ZP_01967644.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|317501588|ref|ZP_07959782.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088546|ref|ZP_08337459.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847544|gb|EDK24462.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|316897005|gb|EFV19082.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407808|gb|EGG87302.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 881

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  +  +   P  
Sbjct: 452 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMVFSGYEHTGKSPF- 509

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             V  HG +   +G K+SKSLGN IDP+E+I++ G DALR  LV   A G D  FY+   
Sbjct: 510 HTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDKYGADALRLTLVTGNAPGNDMRFYN--- 566

Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +RV A  + AN + N  SR + M + +     P+   FT +D  ILS  + + +++ +
Sbjct: 567 --ERVEASRNFANKVWN-ASRFIMMNMDENIIDEPSHDLFTPADRWILSAANTLAKDVTD 623

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAI 460
           NM    +  A+ +V   + +   D Y +  K     K+  P+ A+  L+V   V+ Q   
Sbjct: 624 NMDKFELGIAVQKVYDFIWDEFCDWYVEMAKFRIYHKEEAPEAANCALWVLKTVLAQGLK 683

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
           LL  F+P +  +I+  L   +E+
Sbjct: 684 LLHPFMPFITEEIYGALVPEEES 706



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R +   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD
Sbjct: 33 DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84


>gi|114567165|ref|YP_754319.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338100|gb|ABI68948.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 883

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 49/314 (15%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+ + WG +IP              +DP +              ++  W  
Sbjct: 399 ENIRDWCISRQLW-WGHRIPVWYCQECGEIICSKEDPNHCPNCESAELKQDEDVLDTWFS 457

Query: 234 ALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP 287
           +     +T G+   PD ++    F+P  + V G+DI+ F    W A ++ + +     +P
Sbjct: 458 SALWPFSTLGW---PDKTRDLDFFYPTTVLVTGRDIIFF----WVARMIFSGIEHMGEVP 510

Query: 288 -KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              V  HG IL  +G K+SKSL N IDPIEVIE+ G D LR+ L+  +  G D  +  D 
Sbjct: 511 FYDVNIHGLILDAQGRKMSKSLNNGIDPIEVIEKFGADTLRFSLITGVTPGNDVRFHWDK 570

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           ++   N   AN I N  SR V M ++ ++ + P     + +D  ILS     + E+   +
Sbjct: 571 VENTRN--FANKIWN-ASRFVLMNMEGFEAIKPGLEELSLADRWILSRLQLTIAEVTNLL 627

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
               +  A  ++   + +   D Y +  KP  + + NP     V  V  +V+  +  LL 
Sbjct: 628 DKYDLGEAARRLYEFIWDEFCDWYIELAKPRLVNQDNPRERLVVQNVLRDVLVDILRLLH 687

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 688 PFMPFITEEIYQFL 701



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           H+GHA +  + D+L R+ R+ G + L+  GTD  G     ++ +A    G+         
Sbjct: 55  HLGHALDNTLQDILTRWRRMQGYNALWLPGTDHAGIATQARVEEALAREGLNKYELGREK 114

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                     ++ ++ ++    M    D S + F  T ++      R ++  + +KG IY
Sbjct: 115 FLERVWEWKHLYGNRITQQLSLMGSSCDWSRERF--TMDEGCSRAVREVFVNLYEKGLIY 172

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G Y   +  R     +D EV ++ +DG  ++ ++
Sbjct: 173 QGDYIINWCPRCHTAISDIEVEHEDSDGHLWHIRY 207


>gi|327292537|ref|XP_003230967.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466904|gb|EGD92357.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 599

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 111/510 (21%), Positives = 203/510 (39%), Gaps = 57/510 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ + N  PH+G+    +++ D  AR+ R  G++ L+  G DE+G      A
Sbjct: 12  QRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGADEYGTTTEAKA 71

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G + + 
Sbjct: 72  LADNCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLEKNGFLEER 131

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADG-------------QYYNAQ-----HNP 156
             +  Y     ++  D  V        Y  A G             Q  N +       P
Sbjct: 132 MTTQLYCEEHHSFLADRFVEGECPGCGYTDARGDQCDLCGQLLESLQLRNPRCKIDGSTP 191

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V   + +  F  L   Q K+ +++ +S               S++K GLK  S++R    
Sbjct: 192 VT-RDTKHIFLELDKLQAKVENFFRDSTTNGSWSNNGAIITASWLKEGLKPRSITRD-IS 249

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267
           WG ++P       ++Y W DA   Y++ T  Y D       ++W  P D+ +   IGKD 
Sbjct: 250 WGTRVPLSGYEDKVIYSWFDACIGYVSITARYTDQ----WKRWWRNPKDVQLYQFIGKDN 305

Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH++ +PA  +       K   + +  ++ +KG K SKS G  V         +  D 
Sbjct: 306 VIFHSVIFPASQIGTEDTWTKLHHLSTTDYLTYKGGKFSKSRGIGVFGDSAQKTGIPADI 365

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R FL+       D  +  D      N  L   +GN VSR +  +    D      G   
Sbjct: 366 WRCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRRDSFATFKGEI- 424

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
                     +R+L +    +    I  A + V+ +  + + +    +    L +  P +
Sbjct: 425 ----------NRLLTQYNRELDAVKIRSAWSTVLQISQQSNGFLQLNRLDNSLAENEPSK 474

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + V+ +    +  LA L+  ++P  AN I
Sbjct: 475 CAAVIGIATNTVHLLASLIAPYMPDTANSI 504


>gi|304316504|ref|YP_003851649.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778006|gb|ADL68565.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 878

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 59/315 (18%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWID 233
           + +KD  +SR+ + WG +IP              DDP              + ++  W  
Sbjct: 396 NNIKDWCISRQLW-WGHRIPAWYCDDCGYVTVSKDDPTCCEQCGSKNIHQDEDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK----- 288
           +     +T G+ D+ +  K  F+P D+ V G DI+ F    W A ++  +L   K     
Sbjct: 455 SALWPFSTMGWPDDTEDLKY-FFPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFK 509

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +V  HG +   +G K+SKSLGN IDP+E+IE+ G D LR+ L+   A G D  +  D L+
Sbjct: 510 RVLIHGLVRDSQGRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGNDMRFSDDKLE 569

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              N   AN + N  SR V + L   D  +        +D+ IL+  + V++E+ EN++ 
Sbjct: 570 ASRN--FANKLWN-ASRYVMLNLTSDDTTLYLEN-LNIADKWILTRLNNVVKEVTENLEK 625

Query: 408 QLIHRALAQVIS-LVSE-VDRYFDAQKP------WELKKTNPDRASTVLYVTVEVIRQLA 459
             +  A  ++   L SE  D Y +  KP       E KK      S + YV    +R   
Sbjct: 626 YELGIAAGKLYDFLWSEFCDWYIELSKPVLYGDDLEAKKKT---KSVLRYVLDNTLR--- 679

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P +  +IF
Sbjct: 680 -LLHPFMPFITEEIF 693


>gi|303239683|ref|ZP_07326208.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592854|gb|EFL62577.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 883

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 31/296 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP   +  W  +     +T G+    +  K  F+P D+ V G DI+ F    W A 
Sbjct: 444 RIEQDPD-TLDTWFSSALWPFSTLGWPQQTEDLKY-FYPTDVLVTGYDIIFF----WVAR 497

Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + L   +K     VF HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ L   
Sbjct: 498 MIFSGLEHMEKEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEVIEQYGTDALRFALTIG 557

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESIL 391
            + G D  +  + ++   N   AN I N  SR V M   ++ D        F  +D+ IL
Sbjct: 558 TSPGNDLRFSSEKVESSRN--FANKIWN-ASRFVLMNFDENIDFSKVDSTKFNSADKWIL 614

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + + +E+ ENM    +  AL ++   + E   D Y +  KP    + +  R     Y
Sbjct: 615 SRVNSLTKEVTENMDKFELGIALQKIYEFIWEEFCDWYIELVKPRLYDREDSSRLEA-QY 673

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD------------ENRCFQSLDQRL 493
           V   V+     LL  ++P +  +I+  L   D            E  CF + ++++
Sbjct: 674 VLNYVLGSAMKLLHPYMPFITEEIYTHLINDDDSIMISKWPQYKEEYCFTAEEEKM 729



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++ K   +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        
Sbjct: 35  DKNKTPYTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGFSALWLPGTDHASIATEA 94

Query: 57  KIAKAAQNAGV 67
           KI +A    G+
Sbjct: 95  KIVEAMAKEGI 105


>gi|331269097|ref|YP_004395589.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125647|gb|AEB75592.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 879

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 18/266 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T GY +  +  +  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 450 VLDTWFSSALWPFSTLGYPEKTEDLEY-FYPTNTLVTGYDIIFF----WVARMIFSGLHS 504

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            KK+  +  ++H      +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  
Sbjct: 505 MKKIPFNTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           Y ++ ++   N   AN I N  SR V M L KD          +T +D+ ILS  + V++
Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMDKYKDSKEYTLADKWILSRINTVVK 621

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+ EN++   +  A  +    +     D Y +  KP  L   +      VL V  EV+++
Sbjct: 622 EVTENIEKFEVGIAAQKTYDFMWNEFCDWYIELVKP-VLYGEDEKAKGIVLNVLNEVLKK 680

Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483
              LL   +P +  +I+  L  A+E 
Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNAEET 706


>gi|227486662|ref|ZP_03916978.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235374|gb|EEI85389.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 878

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 8/227 (3%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F+P D+ + G DI+ F  I   + +   +  +P    +F+      +G K+SKSLGN +D
Sbjct: 471 FFPTDILITGYDIIFFWVIRMVFASLYTTGKVPFSHVLFTGLIRDSQGRKMSKSLGNGVD 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           PI+V+ + G DALR+ L+   + G D  YD+D L    N   AN + N  SR V M + +
Sbjct: 531 PIDVVNKYGADALRFTLITGNSPGNDMRYDEDRLLASRN--FANKLWN-ASRFVLMNIDE 587

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
            D +       T  D+ IL   ++V++++ +N+    I  A  ++   +     D Y + 
Sbjct: 588 SDDLDFDGKNLTLEDKWILKRLNQVIEDVSKNLDKYEIGMAADRIEDFIWNEYCDWYIEF 647

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L   + D  + V  V + V++ + ILL  F+P +  +I+  L
Sbjct: 648 AKI-RLYGDDEDAKANVKKVLLYVLKSMLILLHPFMPFITEEIYSSL 693



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 24/149 (16%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH---------GQKIAKAAQN 64
           PN   Q H+GHA    + D++ R+ R+ G + L+  GTD           G+   +    
Sbjct: 42  PNVTGQLHLGHALNNTLQDIVIRYKRMAGFEALWIPGTDHASISTEAKVVGKIAGEGKTK 101

Query: 65  AGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           A +    F+ +             +  R +    D  +D F  T ++      + ++KK+
Sbjct: 102 ADLGRDGFLKEAWDWTHKYGGTIKKQLRTIGVSCDWDHDSF--TMDENLTRAVKRVFKKM 159

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
            D G IY+G     +    E   +D EVY
Sbjct: 160 YDDGLIYRGDRIVNWDPMAETAISDAEVY 188


>gi|164686738|ref|ZP_02210766.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
 gi|164604128|gb|EDQ97593.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
          Length = 889

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 19/262 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP-AFLLSANLP 285
           ++  W  +     +T G+  N +  +  ++P ++ V G DI+ F  +    A +   N  
Sbjct: 452 VLDTWFSSALWPFSTLGWPHNTEELEY-YYPTNVLVTGYDIIFFWVVRMAFAGMFCMNET 510

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDK 343
             + V  HG +   +G K+SKSLGN I+P+EVI+E G DALR+ L+   + G D  FY  
Sbjct: 511 PFEHVLIHGLVRDSQGRKMSKSLGNGINPLEVIDEYGADALRFMLITGNSPGNDMRFY-- 568

Query: 344 DGLKKRVNA--DLANGIGNLVSRSVSMILKD--YDGMI--PTPGAFTESDESILSVCSRV 397
               +RV A  + AN + N  SR + M + D   +G+        FT +D+ I+S  +RV
Sbjct: 569 ---FERVEASRNFANKLWN-ASRFIFMNIDDEIMNGVTRESVEANFTLADKWIISRANRV 624

Query: 398 LQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+ ENM    +  A  +V     SE  D Y +  KP  L   + +   T LYV   V+
Sbjct: 625 AKEVTENMDKFDLGIAATKVEDFAWSEFCDWYIEIVKP-RLYGEDKEAKQTALYVLTYVL 683

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
            ++  LL  ++P +  +I+  L
Sbjct: 684 EKILKLLHPYMPFITEEIYSCL 705



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          PN   Q H+GHA +  + DVL R+ R+DG + L+  GTD
Sbjct: 47 PNITGQLHMGHALDHTLQDVLIRWKRMDGYEALWQPGTD 85


>gi|229825433|ref|ZP_04451502.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC
           49176]
 gi|229789996|gb|EEP26110.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC
           49176]
          Length = 897

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 21/245 (8%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + AF  +   P    +F HG +    G K+SKSLGN I
Sbjct: 481 FYPTDVLVTGYDIIFFWVIRMVFSAFEHTGKAPFNTVMF-HGLVRDSLGRKMSKSLGNGI 539

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+E+I++ G DALR+ L+   A G D  FY+     +RV A  + AN + N  SR + M
Sbjct: 540 DPLEIIDKYGADALRFTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFIMM 593

Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            L   +  +P        T +D+ ILS  +++  E+ ENM    +  A+ +V   + E  
Sbjct: 594 NLDAAE--VPANIELSDLTPADKWILSRANKLSAEMTENMDAFELGIAVQKVYDFIWEEF 651

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  KP     T+  +A+ +  +   +I  L  LL  F+P +  +I+  L   + N
Sbjct: 652 CDWYIEMVKPRLYSDTDKTKAAALFTLKTVLINMLK-LLHPFMPFVTEEIYQALRENEPN 710

Query: 484 RCFQS 488
              ++
Sbjct: 711 EAVKA 715



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 7/65 (10%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L RF R+ G + L+  GTD      A  A  A +  K+  
Sbjct: 46  PNITGQLHMGHALDNTMQDILIRFKRMQGFEALWQAGTDH-----ASIATEAKIVEKLKE 100

Query: 74  DQNSR 78
           +  S+
Sbjct: 101 EGTSK 105


>gi|290969030|ref|ZP_06560565.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780986|gb|EFD93579.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 886

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 22/269 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           I  DP  ++  W  +     +T G+         KF+P  + V G DI+ F    W A +
Sbjct: 446 ITRDPD-VLDTWFSSALWPFSTQGW-PKKTADIQKFFPTSVLVTGYDIIFF----WVARM 499

Query: 280 L------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +        ++P  K VF HG +    G K+SKSLGN IDP+ V EE G DALR+ LV  
Sbjct: 500 MFMTCEFMKDIPF-KHVFIHGLVRDSLGRKMSKSLGNGIDPLGVCEEYGADALRFTLVTG 558

Query: 333 IACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESI 390
              G D  FY +   +   N + AN I N  S+ V M L +Y D  +P     T +D  I
Sbjct: 559 NTPGNDMRFYME---RVEANRNFANKIWN-ASKFVIMNLTEYDDAFVPEAADLTLADRWI 614

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448
           L++ +  +Q++  ++    +  A   V + +  +  D Y +  K      T+     T  
Sbjct: 615 LTMLNETVQKVTRDLDRFELGEAADTVYNFIWNLYCDWYIELTKKRLYTSTDERNRRTAQ 674

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +V V V+ +   LL  F+P +   ++  L
Sbjct: 675 FVLVHVLTRTLELLHPFMPFVTEHLWQHL 703



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 13/76 (17%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          E EK   S  +  PN   Q H+GHA +  + D+L RF R+ G    +  GTD        
Sbjct: 35 ENEKEAFSIVMPPPNVTGQLHMGHALDNTLQDILIRFKRMQGYHTAWIPGTD-------- 86

Query: 61 AAQNAGVTTKVFVDQN 76
             +AG+ T+V V+Q 
Sbjct: 87 ---HAGIATQVKVEQQ 99


>gi|225389238|ref|ZP_03758962.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme
           DSM 15981]
 gi|225044699|gb|EEG54945.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme
           DSM 15981]
          Length = 880

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 17/229 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+    ++W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 475 FYPTDVLVTGYDII----LFWVIRMVFSGLEQTGKCPFHTVLIHGLVRDSQGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M
Sbjct: 531 NGIDPLEVIDKYGADALRMTLLTGNAPGNDMRFYWERVENSRN--FANKVWN-ASRFIMM 587

Query: 369 -ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            I K  D    TP + T +D  ILS  + +  ++ EN+    +  AL +V   + E   D
Sbjct: 588 NIEKAPDVSGVTPDSLTMADRWILSKVNTLAGDVTENLDRYELGIALQKVYDFIWEEFCD 647

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y +  KP    + +  +A+ V  +   +I  L  LL  F+P +  +IF
Sbjct: 648 WYIEMVKPRLYNEDDATKAAAVWTLKTVLINALK-LLHPFMPFITEEIF 695


>gi|229829588|ref|ZP_04455657.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM
           14600]
 gi|229791577|gb|EEP27691.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM
           14600]
          Length = 888

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 16/229 (6%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 478 FYPTDVLVTGYDIIFF----WVIRMMFSALEQTGKAPFHHVLIHGLVRDDQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+E+I+  G DALR  L+   A G D  +  + ++   N   AN + N  SR + M
Sbjct: 534 NGIDPLEIIDRYGADALRLTLITGNAPGNDMRFYIERVENSRN--FANKVWN-ASRFILM 590

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L       P        D  I S  + V++E+ +NM+   +  A+ +V   + +   D 
Sbjct: 591 NLDGVSLHEPASSELKIEDRWIKSRLNTVVKELTDNMERYELGIAVQKVFDFIWDEFCDW 650

Query: 427 YFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  KP    K+ +PD A+  LY    V+ +   LL  F+P +  +I+
Sbjct: 651 YIEIVKPRMYHKEQDPDSANAALYTLKGVLAEALKLLHPFMPFITEEIY 699


>gi|166031702|ref|ZP_02234531.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC
           27755]
 gi|166028679|gb|EDR47436.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC
           27755]
          Length = 884

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 16/243 (6%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P ++ V G DI+ F  I   +  +  +   P    V  HG +   +G K+SKSLGN I
Sbjct: 477 FYPTNVLVTGYDIIFFWVIRMVFSGYAHTGKAPF-NTVLIHGLVRDSQGRKMSKSLGNGI 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+++I++ G DALR  L+   A G D  FY+     +RV A  + AN + N  SR + M
Sbjct: 536 DPLDIIDQYGADALRMTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRYILM 589

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            ++  +   P       +D  ILS C+ V++++ EN+    +  AL+++   + +   D 
Sbjct: 590 NMEGKEITEPQAEDLGPADRWILSACNNVVKDVTENLDKFELGIALSKIYDFIWDEFCDW 649

Query: 427 YFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           Y +  K        NP  A+  L+   +V+     LL  ++P +  +I+  L   +E+  
Sbjct: 650 YIELSKYAIYHADENPKSANAALWTLKKVLGDALKLLHPYMPFVTEEIYSKLVPEEESLM 709

Query: 486 FQS 488
             S
Sbjct: 710 MSS 712


>gi|55981138|ref|YP_144435.1| valyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|14286172|sp|P96142|SYV_THETH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|66773799|sp|Q5SJ45|SYV_THET8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12084715|pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|12084716|pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|28948386|pdb|1IVS|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|28948387|pdb|1IVS|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|33357071|pdb|1IYW|A Chain A, Preliminary Structure Of Thermus Thermophilus Ligand-Free
           Valyl-Trna Synthetase
 gi|33357072|pdb|1IYW|B Chain B, Preliminary Structure Of Thermus Thermophilus Ligand-Free
           Valyl-Trna Synthetase
 gi|18844753|dbj|BAB85225.1| valyl-tRNA synthetase [Thermus thermophilus]
 gi|55772551|dbj|BAD70992.1| valyl-tRNA synthetase (valine--tRNA ligase) (ValRS) [Thermus
           thermophilus HB8]
          Length = 862

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 18/258 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287
            W  +    L+T G+ +  +  KA F+P D+ V G DIL      +    +      P  
Sbjct: 455 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 512

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +L  KG+K+SKS GNVIDP+E++E  G DALR+ L+     G+D   D   L
Sbjct: 513 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWL 572

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 ++A    N +  +   +L   +G        T +D  + S  SR ++EI    +
Sbjct: 573 ------EMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYE 626

Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              + +A  +V  LV SE  D Y +A KP  LK  N    +  L    EV+  L  LL  
Sbjct: 627 ALDLAQAAREVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHP 681

Query: 465 FVPKLANKIFDILFVADE 482
            +P L ++++  L   +E
Sbjct: 682 MMPFLTSELYQALTGKEE 699


>gi|297616869|ref|YP_003702028.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144706|gb|ADI01463.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 884

 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 45/325 (13%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              ++PQ               ++  W  + 
Sbjct: 401 IRDWCISRQLW-WGHRIPVWYCQDCGQEICAKEEPQRCTNCGQSNLVQDPDVLDTWFSSA 459

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV----- 290
               +T G+   P      F+P D+ V G+DI+ F    W A ++ + L   ++V     
Sbjct: 460 LWPFSTLGW-PAPTSDLEYFYPTDVLVTGRDIIFF----WVARMIFSGLEFMREVPFYDV 514

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             HG IL   G K+SKSLGN IDPI+VI++ G D LR+ L+     G D  +  + ++  
Sbjct: 515 LIHGLILDALGRKMSKSLGNGIDPIDVIDKYGADTLRFSLITGSTPGNDIRFHWEKVENT 574

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   AN I N  +R V M L D++ +      +T +D  ILS     ++++ E +Q+  
Sbjct: 575 RN--FANKIWN-AARFVVMNLDDFEHITLEEKDYTLADRWILSRLQEKIEQVTELLQSYD 631

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  A   +   V +   D Y +  KP   +  N      V  V   V+     LL  F+P
Sbjct: 632 LGEAARVLYDFVWDEFCDWYIELAKPRLYQNANQRDKKVVQNVLHRVLADQMRLLHPFMP 691

Query: 468 KLANKIFDILFVADENRCFQSLDQR 492
            +  +++  L    E+    S  Q+
Sbjct: 692 FVTEEVYQHLPRTAESIMVDSWPQK 716



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+LAR+ R+ G + L+  GTD           +AG+
Sbjct: 42 SMVIPPPNVTGSLHLGHALNNTLQDILARWRRMQGYNTLWLPGTD-----------HAGI 90

Query: 68 TTKVFVDQN 76
           T+  V+++
Sbjct: 91 ATQARVEES 99


>gi|149184145|ref|ZP_01862472.1| methionine--tRNA ligase [Bacillus sp. SG-1]
 gi|148848146|gb|EDL62469.1| methionine--tRNA ligase [Bacillus sp. SG-1]
          Length = 299

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 5/160 (3%)

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG IP   G+    D+ +LSV    + +  E M+      AL
Sbjct: 1   NDLGNLLNRTVAMINKYFDGEIPMYKGSEGPFDKELLSVNKATVAQYEEAMEKMEFSVAL 60

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + +  L+S  ++Y D  +PW L K+   D    V+    E +R+ A++LQ F+ +   KI
Sbjct: 61  SSLWQLISRTNKYIDETQPWVLAKEEKKDELGNVMVHLAETLRRAAVMLQPFLTRTPKKI 120

Query: 474 FDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           F  L V  +E   ++SL++   +  G  + K  +PIFPR 
Sbjct: 121 FQQLNVDQEELTTWESLEEFGMIPAGTQVVKKGEPIFPRL 160


>gi|317418796|emb|CBN80834.1| 'Methionyl-tRNA synthetase, cytoplasmic' [Dicentrarchus labrax]
          Length = 861

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 17/263 (6%)

Query: 227 IMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADLHV-----IGKDILRFHAIYWPAFLL 280
           + YVW DA   YL+ T  Y D  +    K+W     V     + KD + FH++ +P  LL
Sbjct: 460 VFYVWFDAPIGYLSITANYTDKWE----KWWKNPHQVELYNFMAKDNVPFHSVVFPCSLL 515

Query: 281 SA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGK 337
            A  N  L   + +  ++ ++  K SKS G  V   +     +  D  R++L+     G+
Sbjct: 516 GAQDNYTLVNHLVATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWRFYLLYVRPEGQ 575

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +    +  + N++L N +GN ++R+   + K ++G +P      + D+ +L++    
Sbjct: 576 DSAFSWADMATKNNSELLNNLGNFINRAGMFVTKFFEGCVPAI-ELQQEDKKLLALVGWE 634

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEV 454
           LQ+  + M    I  AL  ++++    ++Y    +PW+  K       RA TV  ++V +
Sbjct: 635 LQQYIQLMDKVKIRDALKHILNISRHGNQYIQVNEPWKKIKGGDIERQRAGTVTGLSVNI 694

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
              L+++L  ++P ++  I D L
Sbjct: 695 ACLLSVMLFPYMPTVSQTIRDQL 717



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  L +++A+ Y N  PH+G+    ++ ADV +R+ RL G ++LF  GTDE+G      A
Sbjct: 266 KRNLLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWNMLFVCGTDEYGTATENKA 325

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR-ILWK 111
           +  G+T +   D+       +     I +D F RTT ++  +  + I W+
Sbjct: 326 REEGLTPQQICDKYHAIHSSIYKWFQIDFDFFGRTTTEKQTEIAQNIFWR 375


>gi|218296345|ref|ZP_03497088.1| valyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243139|gb|EED09670.1| valyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 718

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 18/258 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287
            W  +    L+T G+ +  +  KA F+P D+ V G DIL      +    +      P  
Sbjct: 311 TWFSSALWPLSTLGWPEKTEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 368

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +L  KG+K+SKS GNVIDP+E++E  G DALR+ L      G+D   D   L
Sbjct: 369 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLATGGQDIRLDLRWL 428

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 ++A    N +  +   +L   +G  P   A T +D  + S  +R ++EI    +
Sbjct: 429 ------EMARNFANKLYNAARFVLLSREGFSPKEDAPTLADRFMKSRLARGVEEITALYE 482

Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              + +A  +V  L+ SE  D Y +A KP  LK  N    +  L    E +  L  LL  
Sbjct: 483 ALDLAQAAREVYELIWSEFCDWYLEASKP-ALKAGN----AHTLRTLEESLATLLKLLHP 537

Query: 465 FVPKLANKIFDILFVADE 482
            +P + ++++  L   +E
Sbjct: 538 IMPFITSELYQALTGREE 555


>gi|315929371|gb|EFV08576.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
          305]
          Length = 82

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 52/78 (66%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3  YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68 TTKVFVDQNSRNFRDMAD 85
          T + + D+ S  F+ + D
Sbjct: 63 TPQEYADKISFEFKKLWD 80


>gi|253681583|ref|ZP_04862380.1| valine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561295|gb|EES90747.1| valine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 879

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 18/265 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T GY +  +  +  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 450 VLDTWFSSALWPFSTLGYPEKTEDLEY-FYPTNTLVTGYDIIFF----WVARMIFSGLHS 504

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            KK+  +  ++H      +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  
Sbjct: 505 MKKIPFNTVLIHGIVRDSQGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           Y ++ ++   N   AN I N  SR V M L KD          +T +D+ ILS  + V++
Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMDKYKDSKEYTLADKWILSRINTVVK 621

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+ EN+    +  A  +    +     D Y +  KP  L   +      VL V  EV+++
Sbjct: 622 EVTENIDKFEVGIAAQKTYDFMWNEFCDWYIELVKP-VLYGEDEKAKGIVLNVLNEVLKK 680

Query: 458 LAILLQAFVPKLANKIFDILFVADE 482
              LL   +P +  +I+  L  A+E
Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNAEE 705


>gi|307692585|ref|ZP_07634822.1| valyl-tRNA synthetase [Ruminococcaceae bacterium D16]
          Length = 876

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 164/401 (40%), Gaps = 80/401 (19%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE---------FILPIER 192
           Y G D   Y A+   V  +EE+GY  ++  +Q  + + Y  H +         F+     
Sbjct: 313 YSGMD--RYEARKAIVADLEEQGYLVKVEPHQHNVGTCYRCHSDVEPIISAQWFVKMAPL 370

Query: 193 RNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP----DDPQY--- 226
             E I  V+ G                   + D  +SR+ + WG +IP    DD  +   
Sbjct: 371 AKEAIRVVEEGETKFVPDRFSKTYLNWMENVHDWCISRQLW-WGHQIPVWYCDDCGHMTV 429

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ +  +  K  F+P D+ V G 
Sbjct: 430 SREDACECEKCHSKNIHRDPDVLDTWFSSALWPFSTLGWPEETEDLKY-FYPTDVLVTGY 488

Query: 266 DILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
           DI+ F    W A ++ +     K+     VF HG +   KG K+SKSLGN IDP+E+ E+
Sbjct: 489 DIIFF----WVARMIFSACEQTKQPPFHTVFIHGLVRDDKGRKMSKSLGNGIDPLEIAEK 544

Query: 320 VGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            G DALR+ LV   + G D  FY +     R   + AN I N  SR + M L      +P
Sbjct: 545 YGADALRFNLVTGNSPGNDMRFYTERCEAMR---NFANKIWN-ASRFLMMNLTIDKCELP 600

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                   D+ ILS  +R + EI ENM    +  A  ++   + +   D Y +  K   L
Sbjct: 601 E--KLELEDKWILSKLNRAIGEITENMDKYELGVAAQKIYDFIWDDYCDWYIELTKT-RL 657

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + D       V   V+  +  LL  F+P +  +I+  L
Sbjct: 658 QGDDEDSKVRAQQVLCYVLTDMLKLLHPFMPFITEEIWQAL 698



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+   I         Q H+GHA +  + D+L RF R++G   L+  G D          
Sbjct: 35  ERKPFTIVMPPPNVTGQLHMGHAMDCALQDILIRFKRMEGYAALWVPGMD---------- 84

Query: 63  QNAGVTTKVFVDQNSRN 79
            +AG+ T++ V++  R 
Sbjct: 85  -HAGIATQIKVEEELRT 100


>gi|193794528|gb|ACF21476.1| methionyl-tRNA synthetase [Actinomyces viscosus]
          Length = 168

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GRIPEPGELQDIDRALLDAVEAGFTTVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +PD   R +T+L+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPDTQARLATILHTLAQVVADL 166


>gi|154484613|ref|ZP_02027061.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC
           27560]
 gi|149734461|gb|EDM50378.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC
           27560]
          Length = 879

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 173/410 (42%), Gaps = 77/410 (18%)

Query: 130 LRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE--- 185
           L D+A   DD   Y G D   Y A+   V+ +++EGY  ++  ++  + + Y  H     
Sbjct: 297 LTDDAKIVDDYPKYAGMD--RYEARKAIVEDLDKEGYLVKIEDHEHNVGTCYRCHTTIEP 354

Query: 186 ------FILPIERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKI 220
                 F+   E     I  VK+G                   ++D  +SR+ + WG +I
Sbjct: 355 RVSKQWFVKMEEIAKPAIEAVKNGDTKFVPPHFDKTYFHWLENIRDWCISRQLW-WGHRI 413

Query: 221 P----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           P                             DP   +  W  +     +T G+ DN +   
Sbjct: 414 PAFYCDDCGEMVVTKEDHAVCPKCGKEMRQDPD-TLDTWFSSALWPFSTLGWPDNTE-EL 471

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNV 310
             F+P ++ V G DI+ F  I      L     +P   V  HG +   +G K+SKSLGN 
Sbjct: 472 DYFYPTNVLVTGYDIIFFWVIRMMFSGLEHTGKVPFDTVLIHGLVRDSQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVS 367
           IDP+EVI++ G DALR+ L+   A G D  FY      +RV A  + AN + N  SR + 
Sbjct: 532 IDPLEVIDKYGADALRFTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIQ 585

Query: 368 MILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           M + +    +   P   T++D+ ILS  + + +++ EN+    +  A  ++   + E   
Sbjct: 586 MNMPEEGIDVKNKPENLTDADKWILSKVNTLAKDVTENLDKFELGIAADKIYEFIWEEFC 645

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  KP  L   + D     L+   +V+     LL  ++P +  +IF
Sbjct: 646 DWYIEMVKP-RLYNDDDDTKKAALWTLKKVLIDALKLLHPYMPFITEEIF 694



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +R K   +  +  PN   Q H+GHA +  + D+L RF R+ G + L+  GTD        
Sbjct: 32  DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRFKRMQGYEALWLPGTDHASIATEA 91

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           KI +  +  G+T +   D     F D A      Y   I +  K+   +C
Sbjct: 92  KIVEKMREEGITKE---DLGREKFLDRAWQWKAQYGGRIVSQLKKIGSSC 138


>gi|291563752|emb|CBL42568.1| valyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 883

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 15/252 (5%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288
            W  +     +T G+    D  K  F+P D+ V G DI+ F  I      L      P  
Sbjct: 455 TWFSSALWPFSTLGWPKETDEMKY-FYPTDVLVTGYDIIFFWVIRMVFSGLEQTGECPFN 513

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGL 346
            V  HG +   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  FY     
Sbjct: 514 TVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY----- 568

Query: 347 KKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +RV A  + AN + N  SR + M ++            T +D+ ILS  + + +E+ EN
Sbjct: 569 WERVEASRNFANKVWN-ASRFIMMNIEKAPAGEAKLTDLTAADKWILSKVNDLAKEVTEN 627

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M    +  AL +V   V E   D Y +  KP      +  +A+ +  +   +I  L  LL
Sbjct: 628 MDKYELGIALQKVYDFVWEEFCDWYIEMVKPRLWNDEDRTKAAAIWTLKTVLINSLK-LL 686

Query: 463 QAFVPKLANKIF 474
             F+P +  +IF
Sbjct: 687 HPFMPFITEEIF 698


>gi|307719496|ref|YP_003875028.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533221|gb|ADN02755.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 882

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 53/363 (14%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H PV+    E +F R+     K L  +E       P +  N    ++++ ++D  +SR+ 
Sbjct: 353 HVPVEPYLSEQWFVRMDTMAQKALKAWEEGKIQFFPRKWENTYTHWLRN-IRDWCISRQL 411

Query: 214 FDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLTTTGYL 245
           + WG +IP              +DP              + ++  W  +     +T G+ 
Sbjct: 412 W-WGHRIPVWYCDDCGAQMVLREDPTSCTSCGSTKIRQDEDVLDTWFSSWLWPFSTLGWP 470

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHK- 299
           +  +  K +F+P    V   DI+ F    W A ++ A+L    +V     +  G +  K 
Sbjct: 471 EETEDLK-RFFPTTTLVTAYDIIFF----WVARMIMASLEFMHEVPFRDIYITGLVRDKQ 525

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+E++EE G DALR+ L    A G+D   DK+  +  V A  AN I 
Sbjct: 526 GRKMSKSLGNGIDPLEIVEEYGADALRFTLAFLAAQGQDVLLDKETFQ--VGAHFANKIW 583

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           N    +   IL + +G    P    E+   D  IL   ++ ++ +R+ ++    + A   
Sbjct: 584 N----ASRFILMNLEGRTLIPFEEIETTDVDRWILHRLNQTIRTVRDALETYRFNEAAQT 639

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                     D Y ++ K   L   +      V+ + + V+ Q   LL  F+P +  +++
Sbjct: 640 AYEFFWSDFCDWYIESAKR-SLNGDDEREKDRVVSLLLFVLEQALKLLHPFLPFVTEELY 698

Query: 475 DIL 477
             L
Sbjct: 699 QKL 701


>gi|147677147|ref|YP_001211362.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273244|dbj|BAF58993.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 886

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 22/236 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILHK-GEKISKS 306
           A ++P  + V G+DI+ F    W A ++ + L     +P ++VF HG +L   G K+SKS
Sbjct: 478 AYYYPNSVLVTGRDIIFF----WVARMIFSGLAFMNDVPFREVFIHGLVLDALGRKMSKS 533

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKD---GFYDKDGLKKRVNADLANGIGNLVS 363
           LGN +DPI+VIE  G D+LR+ L+     G D    F   DG +     + AN + N  S
Sbjct: 534 LGNGVDPIDVIESHGADSLRFMLITGNTPGNDLRFHFERLDGAR-----NFANKLWN-AS 587

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-S 422
           R V M L+D+D     PG ++ +D  I+S     +  +   ++   +  A   +   + S
Sbjct: 588 RFVLMNLEDFDPE-GRPGPYSLADRWIISRLQAAIAGVSRYLEAYELGEAARVLYDFIWS 646

Query: 423 E-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E  D Y +  KP    KT P+   T  +V   V++    LL  F+P +  +I+  L
Sbjct: 647 EFCDWYIELAKPRLYGKTTPEDRYTAQHVLSSVLKCTLELLHPFMPFITEEIWQHL 702


>gi|255659387|ref|ZP_05404796.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848348|gb|EEX68355.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 892

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 16/230 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFIL-HKGEKISKSL 307
           +F+P    V G DI+ F    W A ++   L   K      VF HG +   +G K+SKSL
Sbjct: 482 QFYPTATLVTGYDIIFF----WVARMVMMGLEFGKDIPFHHVFIHGLVRDSQGRKMSKSL 537

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN I N  SR + 
Sbjct: 538 GNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN--FANKIWN-ASRYML 594

Query: 368 MILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           M  + +D    P    FT +D+ ILS  ++  + + +++ N  +  A   +   +     
Sbjct: 595 MNFEGFDKSFKPEAADFTLADKWILSRYAKTAEGVTKSLDNFELGEAGRMIYEFIWNEFC 654

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  K     K N    +T LYV   V+     LL  F+P L  +I+
Sbjct: 655 DWYIELTKARLYDKENERAKNTALYVLSYVLEHTLRLLHPFMPFLTEEIW 704



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   Q H+GHA +  + D+L R+HR+ G + ++  G D  G  IA  A+  G 
Sbjct: 46  SMVIPPPNVTGQLHMGHALDNTLQDILIRYHRMQGYNTVWIPGCDHAG--IATQAKVEGA 103

Query: 68  TTK 70
             K
Sbjct: 104 LRK 106


>gi|15644561|ref|NP_229614.1| valyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|148270232|ref|YP_001244692.1| valyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281412433|ref|YP_003346512.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|12585357|sp|Q9X2D7|SYV_THEMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4982399|gb|AAD36880.1|AE001819_3 valyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|147735776|gb|ABQ47116.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281373536|gb|ADA67098.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 865

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 30/269 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +     +T G+ +  +  K +++P DL V G DI+ F    W A ++      
Sbjct: 447 VLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGFDIIFF----WVARMIMMGYEF 501

Query: 286 LPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +  K FSH +I H+      G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D 
Sbjct: 502 MNDKPFSHVYI-HQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDI 560

Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
             D    D  KK      AN I N  +R V M L+DY   +P     T  D+ IL+  ++
Sbjct: 561 KLDPRYFDAYKK-----FANKIWN-ATRFVLMNLEDYKE-VPLENLKT-VDKWILTRLNK 612

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++E+   ++N   + A   + +   +   D Y +A KP  LK    +   TVL   V+V
Sbjct: 613 TVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKP-RLKTEERNLVQTVL---VKV 668

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +     LL  F+P L  +++  L VA E+
Sbjct: 669 LDASLRLLHPFMPFLTEELWQKLPVAGES 697



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----- 62
           S  I  PN   + H+GHA  + + D++ R+ R+ G DVL+  G D  G     A      
Sbjct: 37  SIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLL 96

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107
           Q  G T            T  + ++  R  R+    L  S  D+ R   T ++      R
Sbjct: 97  QTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASV-DWTRERFTLDEGLSRAVR 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++ ++  KG IY+G Y   +  R +   +D+EV
Sbjct: 156 KVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEEV 189


>gi|170288799|ref|YP_001739037.1| valyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176302|gb|ACB09354.1| valyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 865

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 30/269 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +     +T G+ +  +  K +++P DL V G DI+ F    W A ++      
Sbjct: 447 VLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGFDIIFF----WVARMIMMGYEF 501

Query: 286 LPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +  K FSH +I H+      G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D 
Sbjct: 502 MNDKPFSHVYI-HQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDI 560

Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
             D    D  KK      AN I N  +R V M L+DY   +P     T  D+ IL+  ++
Sbjct: 561 KLDPRYFDAYKK-----FANKIWN-ATRFVLMNLEDYKE-VPLENLKT-VDKWILTRLNK 612

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++E+   ++N   + A   + +   +   D Y +A KP  LK    +   TVL   V+V
Sbjct: 613 TVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKP-RLKTEERNLVQTVL---VKV 668

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +     LL  F+P L  +++  L VA E+
Sbjct: 669 LDASLRLLHPFMPFLTEELWQKLPVAGES 697



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----- 62
           S  I  PN   + H+GHA  + + D++ R+ R+ G DVL+  G D  G     A      
Sbjct: 37  SIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLL 96

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107
           Q  G T            T  + ++  R  R+    L  S  D+ R   T ++      R
Sbjct: 97  QTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASV-DWTRERFTLDEGLSRAVR 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++ ++  KG IY+G Y   +  R +   +D+EV
Sbjct: 156 KVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEEV 189


>gi|325849754|ref|ZP_08170901.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325479983|gb|EGC83063.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 875

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 41/309 (13%)

Query: 202 SGLKDLSLSRKTFDWGIKIP-------------DDPQYIMYV--------------WIDA 234
             ++D  +SR+ + WG ++P             DDP    Y+              W  +
Sbjct: 393 ENIRDWCISRQLW-WGHRLPVFYTEDGEIIVSEDDPDENGYLNGKKVTQEEDTLDTWFSS 451

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFS 292
                 T G+ +  +  K  F+P D+ V G DI+ F  I   + +   +   P    +F+
Sbjct: 452 ALWPFATLGWPEETEDYKY-FFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFT 510

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DPI+V+ + G DALR+ ++   + G D  YD    +KR+ A
Sbjct: 511 GLIRDPQGRKMSKSLGNGVDPIDVVNKYGADALRFTIITGNSPGNDMRYD----EKRIVA 566

Query: 353 --DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             + AN + N  +R V M + + D +       +  D+ IL   + V++E+ +N+    I
Sbjct: 567 SRNFANKLWN-ATRFVLMNIDESDDLEFNNLDLSLEDKWILKRLNNVVEEVSKNLDKYEI 625

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A +++   + E   D Y +  K   L  ++ ++ STV  V + V++ +  LL  F+P 
Sbjct: 626 GLAASRIEDFIWEEFCDWYIEFAKE-RLNSSDENKKSTVKKVLLYVLKDMISLLHPFMPF 684

Query: 469 LANKIFDIL 477
           +  +I+  L
Sbjct: 685 ITEEIYKQL 693



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 49/213 (23%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++K   +  +  PN   + H+GHA    I D++ R+ R+ G +  +  GTD      A  
Sbjct: 30  KDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDH-----ASI 84

Query: 62  AQNAGVTTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIR 96
           +  A V  K+  +  S++                          R +    D   D F  
Sbjct: 85  STEAKVVGKIKSEGKSKDELGRDKFLEECWDWTEEYGGTIKKQLRTVGVSCDWDRDSF-- 142

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN 155
           T +K      R ++KK+ D G IY+G     +    +   +D EVY K  +G  +  +  
Sbjct: 143 TMDKNLTRAVRKVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIK-- 200

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                    YFF  S   D+ ++   + PE +L
Sbjct: 201 ---------YFFEDS---DEFITIATTRPETML 221


>gi|193794312|gb|ACF21368.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHALAQVVTDL 166


>gi|1814011|emb|CAA71837.1| valyl-tRNA synthetase [Thermus thermophilus]
          Length = 854

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 18/258 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287
            W  +    L+T G+ +  +  KA F+P D+ V G DIL      +    +      P  
Sbjct: 447 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 504

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +L  KG+K+SKS GNVIDP+E++E  G DALR+ L+     G+D   D   L
Sbjct: 505 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWL 564

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 ++A    N +  +   +L   +G        T +D  + +  SR ++EI    +
Sbjct: 565 ------EMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRTRLSRGVEEITALYE 618

Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              + +A  +V  LV SE  D Y +A KP  LK  N    +  L    EV+  L  LL  
Sbjct: 619 ALDLAQAAREVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHP 673

Query: 465 FVPKLANKIFDILFVADE 482
            +P L ++++  L   +E
Sbjct: 674 MMPFLTSELYQALTGKEE 691


>gi|193794316|gb|ACF21370.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794334|gb|ACF21379.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794336|gb|ACF21380.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794344|gb|ACF21384.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794352|gb|ACF21388.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794358|gb|ACF21391.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794366|gb|ACF21395.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794372|gb|ACF21398.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794384|gb|ACF21404.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794386|gb|ACF21405.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794394|gb|ACF21409.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794396|gb|ACF21410.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794398|gb|ACF21411.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794400|gb|ACF21412.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794404|gb|ACF21414.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794416|gb|ACF21420.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794418|gb|ACF21421.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794428|gb|ACF21426.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794446|gb|ACF21435.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794456|gb|ACF21440.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794462|gb|ACF21443.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794466|gb|ACF21445.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794476|gb|ACF21450.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794496|gb|ACF21460.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794498|gb|ACF21461.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794504|gb|ACF21464.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794506|gb|ACF21465.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794518|gb|ACF21471.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794520|gb|ACF21472.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|323140721|ref|ZP_08075640.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322414739|gb|EFY05539.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 911

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 23/259 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP---- 285
            W  +     +T G+ D     K +F+P  + V G DI+ F    W A +L   +     
Sbjct: 483 TWFSSALWPFSTMGWPDKTPLLK-QFYPTSVLVTGYDIIFF----WVARMLIMGMEFMHE 537

Query: 286 LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYD 342
           +P  KVF HG +   +G K+SKSLGN IDP+EVI++ G D LR+ L+     G D  FY 
Sbjct: 538 IPFDKVFIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGADTLRFMLITGNTPGNDMRFY- 596

Query: 343 KDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                +RV A  + AN I N  SR   M ++ YD        +T +D+ ILS      + 
Sbjct: 597 ----WERVEATRNFANKIWN-ASRFALMNMEGYDANAKL-APYTLADKWILSRLQHTAKS 650

Query: 401 IRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E ++   +  A   +   +  EV D Y +  KP    K N +  +T  +V   V+   
Sbjct: 651 VTEMLEKFELGEAGRMIYDFIWGEVCDWYIELAKPRLYNKENAEERATAQHVLATVLTSA 710

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  ++P +  +I+  L
Sbjct: 711 MQLLHPYMPFITEEIYQCL 729



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           E  K   S  I  PN   Q H+GHA +  + D+L R+HR+ G + L+  G D  G
Sbjct: 62  EEGKDAFSIVIPPPNITGQLHMGHALDNTLQDILIRWHRMMGHNTLWMPGYDHAG 116


>gi|193794452|gb|ACF21438.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRAASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|297624909|ref|YP_003706343.1| valyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297166089|gb|ADI15800.1| valyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 925

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 159/366 (43%), Gaps = 59/366 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +FF++S    K+L+  ++  E  L  ER  +V       L+D ++SR+ + 
Sbjct: 359 PVEPILSTQWFFKMSEVAPKVLAALDAG-EMRLTPERYTKVNRDWLLSLRDWNISRQLW- 416

Query: 216 WGIKIPD--DPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG +IP   DP+  +YV                              W  +     +T G
Sbjct: 417 WGHQIPAWYDPEGNIYVPDPQNPDLDPPDDPRYAHLTLTQDPDVFDTWFSSNLWPFSTLG 476

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS----HGFILHK 299
           + D  D    KF+P  + V G DIL F         L++   L +K FS    HG +L +
Sbjct: 477 WPDTEDPFFKKFFPTSVLVTGYDILFFWVT---KMQLASYALLDQKPFSDIVLHGLVLDE 533

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K SKS GN IDP++VI E G DALR+ +       +D  +D    +  +  +  N +
Sbjct: 534 HGQKQSKSKGNGIDPLDVIAEAGADALRFAMAYASTGAQDIRWDPR--RVEMGRNFGNKL 591

Query: 359 GNLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            N V R   M L D       G +P  G  T     I S   R +QE+  +++   +  A
Sbjct: 592 WNAV-RFAMMHLGDPPLPPLQGGVPEAGGLT--SRWITSRLQRAIQEVTRHLEAFDLGGA 648

Query: 414 LAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
                  V SE  D Y +A KP EL+  N +    +     ++++    LL   +P + +
Sbjct: 649 SRAAYDFVWSEFCDWYLEAAKP-ELRAGNQETRVVLRRTLTDILK----LLHPLMPFITS 703

Query: 472 KIFDIL 477
           ++++ L
Sbjct: 704 ELYEAL 709



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT 68
           H+GHA++  + D L RF R+ G + LF  GTD  G     ++ +A Q+ G+T
Sbjct: 59  HLGHAFDNTLIDTLIRFKRMRGFEALFQPGTDHAGISTQVQVERALQSEGLT 110


>gi|68165416|gb|AAY87668.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165418|gb|AAY87669.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165420|gb|AAY87670.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165422|gb|AAY87671.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165424|gb|AAY87672.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165426|gb|AAY87673.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165428|gb|AAY87674.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165430|gb|AAY87675.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165432|gb|AAY87676.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165434|gb|AAY87677.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165436|gb|AAY87678.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165438|gb|AAY87679.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165440|gb|AAY87680.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165442|gb|AAY87681.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165444|gb|AAY87682.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165446|gb|AAY87683.1| methionyl-tRNA synthetase [Vibrio cholerae]
          Length = 269

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 6   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 65

Query: 66  GVTTKVFVDQNSRNF-RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T +  ++  S    RD A   DIS+D++  T    + +    ++ ++   G I     
Sbjct: 66  GMTPEAMIEMVSEEHQRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 124

Query: 125 SGWYSLRDEAYYNDDEVYKG----------------ADGQYYNAQH--NPVQWM------ 160
           S  +    E +  D  V KG                A G+ Y+     NP   +      
Sbjct: 125 SQLFDPEKEMFLPDRFV-KGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 183

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G 
Sbjct: 184 MKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTT 241
           +IP +     YVW+DA   Y+ +
Sbjct: 241 EIPGEKDKFFYVWLDAPIGYMGS 263


>gi|193794332|gb|ACF21378.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794522|gb|ACF21473.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQSRLATVLHTLAQVVTDL 166


>gi|291536702|emb|CBL09814.1| valyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 887

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 17/257 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  +      P  
Sbjct: 457 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFH 515

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             +F HG +   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  FY    
Sbjct: 516 TVLF-HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFY---- 570

Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +RV A  + AN + N  SR + M L+  +   P+      +D+ ILS  + + +++ E
Sbjct: 571 -WERVEASRNFANKVWN-ASRFIMMNLEGSEIKEPSLDELKPADKWILSKVNTLAKDVTE 628

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAI 460
           NM    +  A+ +V   + +   D Y +  K     K N P  A+   +    V+ +   
Sbjct: 629 NMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNKENDPASANAAFWTLKTVLTEALK 688

Query: 461 LLQAFVPKLANKIFDIL 477
           LL  F+P +  +IF  L
Sbjct: 689 LLHPFMPFITEEIFCTL 705



 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 25/133 (18%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 37  DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRYKRMQGYNALWQPGTD-------- 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI-RTTEKRHHDTCRIL--WKKISDKG 117
              +A + T+V V +N +  +   D  D+  + F+ +  E R     RI+   KK+    
Sbjct: 89  ---HASIATEVKVIENLK--KQGIDKRDLGREGFLEKCWEWRDEYGSRIINQLKKMGSSA 143

Query: 118 D-------IYKGC 123
           D       + KGC
Sbjct: 144 DWERERFTMDKGC 156


>gi|291537986|emb|CBL11097.1| valyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 887

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 17/257 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D  +     F+P D+ V G DI+ F  I   +  +      P  
Sbjct: 457 TWFSSALWPFSTLGWPDKTEDLDY-FYPTDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFH 515

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             +F HG +   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  FY    
Sbjct: 516 TVLF-HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFY---- 570

Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +RV A  + AN + N  SR + M L+  +   P+      +D+ ILS  + + +++ E
Sbjct: 571 -WERVEASRNFANKVWN-ASRFIMMNLEGSEIKEPSLDELKPADKWILSKVNTLAKDVTE 628

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAI 460
           NM    +  A+ +V   + +   D Y +  K     K N P  A+   +    V+ +   
Sbjct: 629 NMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNKENDPASANAAFWTLKTVLTEALK 688

Query: 461 LLQAFVPKLANKIFDIL 477
           LL  F+P +  +IF  L
Sbjct: 689 LLHPFMPFITEEIFCTL 705



 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 25/133 (18%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 37  DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRYKRMQGYNALWQPGTD-------- 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI-RTTEKRHHDTCRIL--WKKISDKG 117
              +A + T+V V +N +  +   D  D+  + F+ +  E R     RI+   KK+    
Sbjct: 89  ---HASIATEVKVIENLK--KQGIDKRDLGREGFLEKCWEWRDEYGSRIINQLKKMGSSA 143

Query: 118 D-------IYKGC 123
           D       + KGC
Sbjct: 144 DWERERFTMDKGC 156


>gi|227431198|ref|ZP_03913252.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352960|gb|EEJ43132.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 894

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 28/265 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ +  DG  A+++P +  V G DI+ F    W A ++  
Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPEKLDGDFARYYPTNTLVTGYDIIFF----WVARMMFQ 510

Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   P  K V  HG I   +G K+SKSLGN +DP++VIE+ G DALR+FLV     
Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLVTGSTP 569

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394
           G+D  +  + +    N    N I N  SR V M L +D    +P     T +D+ ILS  
Sbjct: 570 GQDLRFTYEKMDSAWN--FINKIWN-ASRYVIMNLDEDTPSTLPDMSQLTLADQWILSRL 626

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449
           + V+  +  N        A  ++ + +     D Y +  K  E    + D+A    T+ Y
Sbjct: 627 NTVVTNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDQDKAPVQQTLAY 684

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V  + +R    LLQ  +P +   I+
Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 46  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMD-----------HAGI 94

Query: 68  TTKVFVDQNSR 78
            T+  V+Q  R
Sbjct: 95  ATQAKVEQRLR 105


>gi|291547952|emb|CBL21060.1| valyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 884

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 13/237 (5%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + A   +   P    V  HG +   +G K+SKSLGN I
Sbjct: 477 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGETPF-HHVLIHGLVRDSQGRKMSKSLGNGI 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN I N  SR + M L+
Sbjct: 536 DPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERVESSRN--FANKIWN-ASRFIMMNLE 592

Query: 372 DYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 P    A    D+ ILS  + V++++ ENM    +  A+ +V   + +   D Y 
Sbjct: 593 GKTVTAPEDLNALCNEDKWILSRLNTVIRDVTENMDKYELGIAVQKVYDFLWDELCDWYI 652

Query: 429 DAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   W+ ++ NP  A+  L+     + Q   LL  F+P +  +I+  L   +E+
Sbjct: 653 EMAKVRLWKAEE-NPAAANDALWTLRTALTQGLKLLHPFMPFITEEIYCTLLPEEES 708



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 15/83 (18%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L RF R+ G + L+  GTD           +A + T+V V
Sbjct: 46  PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 94

Query: 74  DQNSRNFRDMADVLDISYDDFIR 96
            +  R  ++  D  +I  D+F++
Sbjct: 95  TEKLR--KEGIDKNEIGRDEFMK 115


>gi|116617448|ref|YP_817819.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096295|gb|ABJ61446.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 894

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 28/265 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ +  DG  A+++P +  V G DI+ F    W A ++  
Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPEKLDGDFARYYPTNTLVTGYDIIFF----WVARMMFQ 510

Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   P  K V  HG I   +G K+SKSLGN +DP++VIE+ G DALR+FLV     
Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLVTGSTP 569

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394
           G+D  +  + +    N    N I N  SR V M L +D    +P     T +D+ ILS  
Sbjct: 570 GQDLRFTYEKMDSAWN--FINKIWN-ASRYVIMNLDEDTPSTLPDMSQLTLADQWILSRL 626

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449
           + V+  +  N        A  ++ + +     D Y +  K  E    + D+A    T+ Y
Sbjct: 627 NTVVTNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDQDKAPVQQTLAY 684

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V  + +R    LLQ  +P +   I+
Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 46  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMD-----------HAGI 94

Query: 68  TTKVFVDQNSR 78
            T+  V+Q  R
Sbjct: 95  ATQAKVEQRLR 105


>gi|110289055|gb|ABG66070.1| methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 471

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 24/303 (7%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +++K GLK   ++R    WG+ +P +     + YVW DA   Y++ T     P+  K   
Sbjct: 103 AWLKEGLKPRCITRD-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITACY-TPEWEKWWK 160

Query: 256 WPADLHV---IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKS---- 306
            P ++ +   +GKD + FH + +P+ LL    N  L K +    ++ ++  K SK+    
Sbjct: 161 NPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIG 220

Query: 307 -LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
             GN      +  EV     RY+L+       D  +    L+ + N +L N +GN ++R 
Sbjct: 221 VFGNDAKSTNIPPEV----WRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRV 276

Query: 366 VSMILK----DYDGMIP-TPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +S I K     Y  ++P +P   + +  +S+     +++ +  + M    I + L   ++
Sbjct: 277 LSFIAKPEGTGYGSVVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMA 336

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + SE + Y    + W+L K +P   +TV+  +V ++  LA LL+ F+P  +  +   L +
Sbjct: 337 ISSEGNAYLQESQFWKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNL 396

Query: 480 ADE 482
           + E
Sbjct: 397 SPE 399


>gi|193794502|gb|ACF21463.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDWALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQSRLATVLHTLAQVVTDL 166


>gi|294633102|ref|ZP_06711661.1| methionine-tRNA ligase [Streptomyces sp. e14]
 gi|292830883|gb|EFF89233.1| methionine-tRNA ligase [Streptomyces sp. e14]
          Length = 213

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 25/201 (12%)

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E V  DA+R++L+RE+    D  +  + L  R +AD A G+GNLV R V+ + +   G 
Sbjct: 24  LELVQADAVRWWLLREVPRTGDADFTAERLIGRADADFAGGLGNLVHRVVTAVHRFRGGA 83

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P           +  VC++V   +   + +    RA   V ++V E +R  DA +PWEL
Sbjct: 84  LPV--VEPSGGLPLTEVCAKVPGRVDAALADFDFRRATRAVWTVVEEANRCIDAARPWEL 141

Query: 437 KKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +   +       R   VL   V   R LA  L+ FVP  A +I                
Sbjct: 142 ARREREGDPAAGARLDAVLVALVAACRVLADELRPFVPGAAARI---------------- 185

Query: 490 DQRLKPGFMLHKTFDPIFPRF 510
            +RL P      T  P+FPR 
Sbjct: 186 AERLTPADGRLPTPRPLFPRL 206


>gi|291303435|ref|YP_003514713.1| valyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572655|gb|ADD45620.1| valyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 874

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 39/325 (12%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------DDP 224
           ILP+E+     S+V + L D  +SR+ + WG +IP                         
Sbjct: 389 ILPLEQEKRYFSWVDN-LHDWCISRQLW-WGHRIPIWYGPGGEQICVGPGETAPEGYTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           + ++  W  +     +T G+   P+ +KA  KF+P  + V G DI+ F  +    F L A
Sbjct: 447 EDVLDTWFSSALWPFSTMGW---PEQTKALEKFYPTSVLVTGYDIIFFWVVRMMLFGLYA 503

Query: 283 --NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V  HG I  + G+K+SKS GN +DPIE ++  G DA+R+ L R    G D 
Sbjct: 504 MDGQPPFKDVVLHGLIRDQFGKKMSKSAGNGVDPIEWMDAYGSDAVRFTLARGSNPGADP 563

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
              +D ++   N    N + N  +R   M     +G +P P   +  D  ILS  S  + 
Sbjct: 564 AIGEDWVQGSRN--FCNKLWN-ATRFALMSGATTEGPLPQPEQLSTIDRWILSRLSHTVT 620

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+   M+   + +A   +     +   D Y +  KP  +     + A++   V   V+  
Sbjct: 621 EVDAQMEAYQLGKASDTLYHFAWDEVCDWYLELSKP--VLMAGGEAATSTRRVLGHVLDT 678

Query: 458 LAILLQAFVPKLANKIFDILFVADE 482
           L  LL    P +  +++  L   +E
Sbjct: 679 LLRLLHPMTPYVTEELWLALTGGEE 703



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 31/165 (18%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           +K   S  I  PN     H+GHA +  I D L R  R+ G + L+  G D  G       
Sbjct: 43  DKPAYSIVIPPPNVTGSLHLGHAMDHTIIDTLIRRKRMQGFEALWMPGMDHAGISTQNVV 102

Query: 56  --QKIAKAAQNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102
             Q   +      +  + FVD+            S   R + D +D   + F  T ++  
Sbjct: 103 ERQLAEEGLSRHDLGREAFVDRVWQWKSEYGGKISGQMRRLGDSVDWDRERF--TMDEGL 160

Query: 103 HDTCRILWKKISDKGDIYKG------CYSGWYSLRD-EAYYNDDE 140
            D  + ++KK+ D G IY+       C     +L D E  ++DD+
Sbjct: 161 SDAVQTIFKKLYDDGLIYRAERIINWCPRCMTALSDIEVNHSDDD 205


>gi|229076690|ref|ZP_04209622.1| Methionine--tRNA ligase [Bacillus cereus Rock4-18]
 gi|228706432|gb|EEL58673.1| Methionine--tRNA ligase [Bacillus cereus Rock4-18]
          Length = 671

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 214/541 (39%), Gaps = 62/541 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K  I+     PN   H+GH +     AD+L R+ +L G +V + +G D+H   +   A
Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPFKA 182

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120
                + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +  
Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242

Query: 121 --------KGCYSGWYSLRDEAYY--NDDEVYKGADGQYYNAQHNPVQWMEE-------- 162
                   K C    Y    EAY   N     + +DG        P   ++         
Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPSCKCC 298

Query: 163 ---------EGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210
                    +  FF LS Y+ +L  YY+     P      ER       +   L D+ +S
Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261
             + DWGI +P +      +YVW +    YL+ T  L    N   + + FW       ++
Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLSDFWNNQDTTIIN 411

Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
             G D   FH++ +PA  L  S ++ LPK + ++ F   +G K S S G+ +   E++E 
Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDITLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D +RY+L        +  +  +     V+ +L    G+ +      +  ++    P 
Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWGSWLHDLKCKLEAEFPNGAPE 531

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437
               + +        +R++ EI    + N    + + ++++ +  + + F A + +  + 
Sbjct: 532 LETLSGNYLMYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492
           K N  R +T + + +   + LAI     +P     +     F++    DE   F    Q+
Sbjct: 592 KNNQQRRNTAIALELYTAKILAIFSSPIMPTFGKMLWGDLGFNVDMQLDEEVSFLPAGQK 651

Query: 493 L 493
           +
Sbjct: 652 V 652


>gi|283796427|ref|ZP_06345580.1| valine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075837|gb|EFE13201.1| valine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091426|emb|CBK77533.1| valyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 883

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 22/231 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 479 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLG 534

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  SR 
Sbjct: 535 NGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRF 588

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           + M ++     + +    T +D  ILS  + + +++ ENM    +  AL +V   + E  
Sbjct: 589 IMMNIEKAPKALASLSELTMADRWILSKVNTLAKDVTENMDKYELGIALQKVYDFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D Y +  KP      +  +A+ +  +   +I+ L  LL  ++P +  +IF
Sbjct: 649 CDWYIEMVKPRLYSDEDTTKAAAIWTLKTVLIQSLK-LLHPYMPFITEEIF 698


>gi|255994058|ref|ZP_05427193.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993726|gb|EEU03815.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 897

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 172/400 (43%), Gaps = 63/400 (15%)

Query: 123 CYSGWYS-LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           C   W   L DE Y  + E    +  + Y   HN V+ +  E +F ++       L   +
Sbjct: 330 CRKRWVKRLDDEGYLVETEDMNISASECYRC-HNTVEPLISEQWFVKMKDLAKPALDAAK 388

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD------------------- 222
           S     +P +     + ++++ ++D  +SR+ + WG +IP                    
Sbjct: 389 SGKLKHIPKKYEKTYLEWLEN-IRDWCISRQLW-WGHRIPAYTCTECGELVVSKEEVCEC 446

Query: 223 --------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHA 272
                     + ++  W  +    L+T G+   P+ S+    F+P ++ V G DI+ F  
Sbjct: 447 PSCKGKVVQDEDVLDTWFSSALWPLSTLGW---PEKSEDFDYFYPTNVLVTGYDIIFFWV 503

Query: 273 I--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +   + A  L   LP    V+ HG +  K G+K+SKSLGN IDP+++I+E G DALR+ L
Sbjct: 504 VRMVFTALELDGRLPF-DNVYIHGLVRDKDGQKMSKSLGNGIDPLKIIDEYGADALRFML 562

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
           +  I+ G D  Y ++ +    N   AN + N  +R + M L    G I   G        
Sbjct: 563 LTGISAGSDIRYQEEKIIAARN--FANKLWN-AARFIFMSL----GQIENEGIDIKKIDV 615

Query: 385 ESDESILSVCSRVLQE--------IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW 434
           +++ES+L    R + E        ++ NM    I  A  ++  L+     D Y +  K  
Sbjct: 616 KNEESLLGTEDRWMIESIHRAMDYMKNNMDKYEIALAGQKIYDLIWNEYCDWYIEVIKGR 675

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                  D+A   + V +E +  +  LL  F+P +  +I+
Sbjct: 676 IFGSDTADKA-VAISVAIECMANMLKLLHPFMPYITEEIW 714


>gi|76800957|ref|YP_325965.1| isoleucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|84029523|sp|Q3ITY7|SYI_NATPD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76556822|emb|CAI48396.1| isoleucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 1061

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 27/296 (9%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   K  + DL+++     +  ++PD    +  VW+D+      T GY  N D  + +
Sbjct: 501 ESVDLHKDTVDDLTITADGTTY-TRVPD----VFDVWLDSSVASWGTLGYPGNEDDFE-E 554

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL-SANLPLP--KKVFSHGFILHK-GEKISKSLGNV 310
            WPADL +   D  R    +W    + SA L     + V  HG+ L + G K+SKS+GN+
Sbjct: 555 LWPADLIMEAHDQTR--GWFWSQLGMGSAALGEAPYETVLMHGWALAEDGRKMSKSIGNI 612

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MI 369
           + P E I+  G D +R FL+ +   G D  +  D ++ R   DL N + N+    +  M 
Sbjct: 613 VAPQEAIDRHGADPMRLFLLTQNPQGDDMRFSWDEMENR-QRDL-NILWNVFRFPLPYMR 670

Query: 370 LKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR 426
           L D+  D +     A    DE +LS  S V  E+ ++ +N    +AL ++++ +V +V R
Sbjct: 671 LDDFDPDAVALDEAALETVDEWVLSRLSTVTAEMTDHWENFRQDKALDELLAFIVEDVSR 730

Query: 427 YFDA---QKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++     ++ WE + +    A  +T+ +V VE  +    LL  + P +A +I+  L
Sbjct: 731 FYIQVVRERMWEEETSESKLAAYATLHHVLVETTK----LLAPYAPFVAEEIYGTL 782


>gi|170016586|ref|YP_001727505.1| valyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803443|gb|ACA82061.1| Valyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 894

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 30/275 (10%)

Query: 217 GIKIPD------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G + PD      DP  ++  W  +     +T G+ +N  G  AK++P +  V G DI+ F
Sbjct: 444 GTQAPDGDGWERDPD-VLDTWFSSALWPFSTMGWPENTTGDFAKYYPTNTLVTGYDIIFF 502

Query: 271 HAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVD 323
               W A ++      +   P  K V  HG I   +G K+SKSLGN +DP++VIE+ G D
Sbjct: 503 ----WVARMMFQGKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGAD 557

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGA 382
           ALR+FL      G+D  +  D +    N    N I N  SR V M L D+    +P    
Sbjct: 558 ALRWFLATGSTPGQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLDDHTPSTLPDLTQ 614

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
            T +D+ ILS  +  +  +  N        A  ++ + +     D Y +  K    +  N
Sbjct: 615 LTLADKWILSRLNTTIDNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK----ETLN 670

Query: 441 PDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474
            D   T +  T+  V+ Q   LLQ  +P +   I+
Sbjct: 671 GDGDKTPVQQTLAYVLDQTLRLLQPIMPFVTEAIW 705



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71
           H+GHA++  + D++ R  ++ G+DVL+  G D  G     K+ +  +  GV+      + 
Sbjct: 59  HLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAKVEQRLRAEGVSRYDLGREK 118

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FV+Q             + +  M   LD   + F  T ++  +     ++  + +KG IY
Sbjct: 119 FVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERF--TLDEGLNKAVNKVFIDLYNKGLIY 176

Query: 121 KGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +G Y   W      A  + + +Y+  +G +Y+ ++
Sbjct: 177 RGEYIINWDPQARTALSDIEVIYQDDEGAFYHVKY 211


>gi|193794406|gb|ACF21415.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFVSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|160894055|ref|ZP_02074834.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50]
 gi|156864433|gb|EDO57864.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50]
          Length = 923

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 10/225 (4%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + A   +   P  K V  HG +   +G K+SKSLGN I
Sbjct: 519 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGKSPF-KHVLIHGLVRDDQGRKMSKSLGNGI 577

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN I N  SR + M ++
Sbjct: 578 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN--FANKIWN-ASRFIMMNME 634

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
             D         T +D  ILS  + +  E+ +NM+   +  A+++V   + E   D Y +
Sbjct: 635 KADFSNVKLSDLTIADRWILSKVNDLAVEMTDNMEKYELGIAVSKVYDFIWEEFCDWYIE 694

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             KP      +  +A+ +  +   +IR L  LL  ++P +  +IF
Sbjct: 695 MVKPRLYNDADETKAAALWTLKTVLIRALK-LLHPYMPFITEEIF 738



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +  +  PN   Q H+GHA +  + D+L RF R+ G   L+  GTD      A 
Sbjct: 75  DRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDH-----AA 129

Query: 61  AAQNAGVTTKV 71
            A    VT K+
Sbjct: 130 IATEVKVTEKL 140


>gi|313903077|ref|ZP_07836471.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466579|gb|EFR62099.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 929

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 43/276 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+    +  +    S    I+P ER   V       ++D  +SR+ + WG +IP   
Sbjct: 373 WFVRMKPLAEPAMEAVRSGRTRIVP-ERFTRVYLHWLENIRDWCISRQIW-WGHRIPAWY 430

Query: 222 -----------DDP--------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP              + ++  W  +     +T G+ D       +F+
Sbjct: 431 CRQCGETVVAREDPDRCPRCGSDALHQDEDVLDTWFSSALWPFSTLGWPDADSPDLRRFY 490

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNV 310
           P  + V G DIL     +W A ++   L     +P + V  HG +   +G+K+SKS GNV
Sbjct: 491 PTSVLVTGYDIL----FFWVARMMVMGLEFMGDVPFRTVLLHGLVRDAQGQKMSKSRGNV 546

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVI++ G DALR+ LV  +A G D  +  +  +   + + AN + N  +R V M L
Sbjct: 547 VDPLEVIDKYGADALRFTLVTGLAPGNDARFSWE--RAEASRNFANKLWN-AARFVLMNL 603

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +D+D     P     +D  IL+    V  +++  ++
Sbjct: 604 QDFDPSRGEPRRENAADRWILARLEAVTADVQRLLE 639



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 21/136 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI--AKAA 62
           S  I  PN     HIGHA    + D+LAR+HR+ G   L+  GTD  G   Q +   + A
Sbjct: 50  SMVIPPPNVTGNLHIGHALNNTMQDILARWHRMQGDVTLWVPGTDHAGIATQHVVEVRLA 109

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD-DFIR-TTEKRHHDTCRI 108
           +  G+  +             + +Q   N       L  S D D +R T ++      R 
Sbjct: 110 REEGLRRQDLGRERFLERVWAWKNQYEANILGQLRRLGASVDWDRVRFTMDEGCSRAVRE 169

Query: 109 LWKKISDKGDIYKGCY 124
           ++ ++ +KG IY+G Y
Sbjct: 170 VFVRLYEKGLIYRGDY 185


>gi|240273433|gb|EER36953.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 541

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 43/441 (9%)

Query: 43  LDVLFTT--GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
           L VLF T  GTDE+G            T +   D+      ++    DI +D F RTT  
Sbjct: 21  LLVLFHTLSGTDEYGTTTEAKGLIEKCTPQELCDKYHAIHAEIYQRFDIGFDIFGRTTTP 80

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
              D  + +++K+ + G + +   +  Y   +E +Y D    +G           P+Q  
Sbjct: 81  LQTDITQDIFRKLYNNGFLKERMTTQLYC--EEHHYADA---RGDQCDMCGQLLEPLQLK 135

Query: 161 EE----EGY----------FFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLK 205
                 +G+          F  L   Q ++  Y++ +      P   ++  ++++K GL+
Sbjct: 136 NPRCKIDGFAPITKDTKHIFLELDKLQPEVEDYFQKASTNGAWPNNGKSITLAWLKEGLQ 195

Query: 206 DLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PAD 259
             S++R    WG ++P  P Y   ++Y W DA   Y++ T  Y D  +    K+W  P D
Sbjct: 196 PRSITRD-MKWGTQVPF-PGYEDKVIYSWFDACIGYVSITAKYTDQWE----KWWRNPED 249

Query: 260 LHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPI 314
           + +   IGKD + FH++ +PA  +    P  K   + +  ++ ++G K SKS G  +   
Sbjct: 250 VQLYQFIGKDNVVFHSVIFPASQIGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGD 309

Query: 315 EVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKD 372
              +  G  D  RY+L+       D  +  D      N+ L N +GN  SR +  +  + 
Sbjct: 310 SAQQTGGSADVWRYYLLSRRPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRF 369

Query: 373 YDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           Y+ ++P    + E S E+     +R+L +  E +    +   LA  + +  + + +    
Sbjct: 370 YNNIVPNWTRYHEPSFETWKEEINRLLTKYVEVLNTVKLRAGLATALHISQQGNLFLQTN 429

Query: 432 KPWE-LKKTNPDRASTVLYVT 451
           K  + L ++ P + + V+ +T
Sbjct: 430 KLNDKLHESEPAKCTAVISLT 450


>gi|239623672|ref|ZP_04666703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521703|gb|EEQ61569.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 880

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 17/229 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + +    K   H  ++H      +G K+SKSLG
Sbjct: 475 FYPTDVLVTGYDIIFF----WVIRMVFSGIEQTGKTPFHTVLIHGLVRDSQGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M
Sbjct: 531 NGIDPLEVIDKYGADALRMTLITGNAPGNDMRFYWERVENSRN--FANKVWN-ASRFIMM 587

Query: 369 -ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            I K  D    +  + T +D  ILS  + + +++ EN+    +  AL +V   + E   D
Sbjct: 588 NIGKAPDVTTVSLDSLTMADRWILSKVNTLTKDVTENLDKYELGIALQKVYDFIWEEFCD 647

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y +  KP    + +  +A+ +  +   +I+ L  LL  F+P L  +IF
Sbjct: 648 WYIEMVKPRLYNEDDTTKAAAIWTLRTVLIQALK-LLHPFMPFLTEEIF 695



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTD--------- 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +A + T+V V    +  ++  D  D+  D F++   K
Sbjct: 84  --HAAIATEVKVIDKLK--KEGIDKADLGRDGFLKECWK 118


>gi|294495458|ref|YP_003541951.1| isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666457|gb|ADE36306.1| Isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 1056

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 24/260 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+      T  Y    D  K ++WPAD    G D  R  F++    + +     P  
Sbjct: 522 VWFDSAVASWATLNYPHRQDQFK-EWWPADFITEGHDQTRGWFYSQLGASMVAFGQAPY- 579

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HGF L   G+K+SKSLGNV+ P EVIE+ G D+LR +++   A  +D  +++D L
Sbjct: 580 KSVLMHGFTLDSTGKKMSKSLGNVVQPHEVIEKYGADSLRCYVLSSSAPWEDLKFNQDEL 639

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFT-------ESDESILSVCSRVL 398
                    N + N+    +  M L ++D   P   +F        + D  ILS    V+
Sbjct: 640 ATIHRT--INILWNVYRFPLPYMALDEFD---PQEVSFEAVEPYLRKEDRWILSRMQSVI 694

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTVEV 454
           +E+  +M+  L+HRA+  +   V E + R++      + W  +  +PD+ + V  V  +V
Sbjct: 695 EEVDRSMEQYLLHRAIRTINEFVLEDLSRWYIQLIRPRTWN-EADDPDKLA-VYRVLYDV 752

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L  ++  F+P LA +++
Sbjct: 753 FVTLCKVIAPFMPHLAEEMY 772


>gi|86605229|ref|YP_473992.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86553771|gb|ABC98729.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 912

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 29/283 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ +  +  K +++P  L   G DI+ F    W A 
Sbjct: 462 RLERDPD-VLDTWFSSALWPFSTLGWPEETEDFK-RYYPTSLMSTGFDIIFF----WVAR 515

Query: 279 L------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +       +  +P  K V+ +G +  + G K+SKS GN IDPIE++++ G DALRY LV+
Sbjct: 516 MAMMGVQFTGQIPF-KDVYINGLVRDEHGAKMSKSKGNGIDPIELLDKYGTDALRYALVK 574

Query: 332 E-IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PTPG 381
           E +  G+D    +  K G    V A  A    N +  +   +L + +G        P P 
Sbjct: 575 EVVGAGQDIRLAYDRKTGESASVEA--ARNFANKIWNASRFVLLNLEGQTPAQLGSPAPE 632

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
           A   +D  ILS       ++ E ++   +      + SL+ +   D Y +  KP  L++ 
Sbjct: 633 ALELADRWILSRLHSTATQVIEELEAYGLGEGARLLYSLIWDDFCDWYIELVKP-RLRRE 691

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +P    T   V   V+  +  LL  ++P +  +++ +L  A++
Sbjct: 692 DPTSKRTAQQVLASVLETILRLLHPWMPHITEEVWQLLTQANQ 734


>gi|269865281|ref|XP_002651869.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063727|gb|EED42187.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 320

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 45/313 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D     
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129

Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158
                          I   C  G  +  D+      Y+ D +  +  + +    +  P Q
Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
               +  FF L    ++L  Y+++          R    +++K  L    ++RK    WG
Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242

Query: 218 IKIP----DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKF-WPAD---LHVIGKDIL 268
           + +P    DD   + YVW DA   YL+     L++  G+   F W      +  +GKD +
Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKWVLFMGKDNV 300

Query: 269 RFHAIYWPAFLLS 281
            FH+I +P  L +
Sbjct: 301 PFHSIIFPCILYA 313


>gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 882

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  +     F+P D+ V G+DI+ F    W A ++   L  
Sbjct: 449 VLDTWFSSALWPFSTMGWPDRTEDLDY-FYPTDVLVTGRDIIFF----WVARMIFMALEF 503

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K V+ HG I    G K+SKSLGN IDP+EV+E+ G DALR+ L+     G D  
Sbjct: 504 MDEPPFKDVYIHGLIRDALGRKMSKSLGNGIDPLEVVEKYGADALRFMLITGNTPGNDMR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCS 395
           + ++ L+   N   AN I N    +   IL + D + P+         T +D+ +LS   
Sbjct: 564 FREERLEASRN--FANKIWN----AARFILMNTDDLDPSEIDENDLKLTLADKWMLSRLQ 617

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +V++E+ +  +      A   +   + SE  D Y +  KP   +  +     T  Y  ++
Sbjct: 618 KVIEEVDKAFEKYYFGEAAKVLYDFIWSEFCDWYIELIKPRLYQDKDVMEKRTAQYTGLK 677

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD 481
           V+ ++  LL   +P +  +I+  L +++
Sbjct: 678 VLEKILRLLHPVMPFITEEIWQQLSISN 705


>gi|115402065|ref|XP_001217109.1| methionyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114188955|gb|EAU30655.1| methionyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 636

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 26/305 (8%)

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLT-TTGY 244
           P   R    S++K GLKD  ++R    WG+ +P  P +   ++YVW +A   Y + T  Y
Sbjct: 225 PKNSRVITESWLKEGLKDRGITRD-LKWGVPVPL-PGFENKVLYVWFEACIGYPSITANY 282

Query: 245 LDNPDGSKAKFW---PADLHV---IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFI 296
            D+      + W   P ++ +   +GKD + FH++ +P   L +N    +   + +  ++
Sbjct: 283 TDD-----WELWWRNPENVQLYQFLGKDNVPFHSVIFPGCQLGSNDKWTMLHHLSTTEYL 337

Query: 297 LHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            ++G K SKS G  V         V  D  RYFL++      D  ++        N++L 
Sbjct: 338 NYEGGKFSKSRGIGVFGNNAKQTGVPADVWRYFLLKNRPETGDTQFEWRSFVDSNNSELL 397

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRA 413
             +GNLV+R + ++   YD  IP    FT  ES +  L   + +L++  E M+   +   
Sbjct: 398 AKLGNLVNRIIKLMAAQYDSTIPE---FTVPESFQPNLDEITGLLRQYIEEMEGVHLRAG 454

Query: 414 LAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +A  + L    +    A +    L    P+RA+ V+   + +I  LA +   ++P  +  
Sbjct: 455 VATAMKLAEAGNGLIQANRLDNALIANEPERAAAVVGTVLNLIYLLASVFYPYLPATSKS 514

Query: 473 IFDIL 477
           I + L
Sbjct: 515 INEQL 519



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE E+ + +++A+ Y N  PH+G+    ++ ADV ARFH+  G   L+  GTDE+G    
Sbjct: 10  KEGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARFHKACGHRTLYICGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
             A    V+ +    + ++  +++ +  +I +D F RT   +H +  + L+K++ D G
Sbjct: 70  TKALEEKVSPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTPKHTEISQSLFKRLYDNG 127


>gi|46199111|ref|YP_004778.1| valyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|81405885|sp|Q72JG7|SYV_THET2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46196735|gb|AAS81151.1| valyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 862

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 18/258 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287
            W  +    L+T G+ +  +  KA F+P D+ V G DIL      +    +      P  
Sbjct: 455 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPF- 512

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +L  KG+K+SKS GNVIDP+E++E  G DALR+ L      G+D   D   L
Sbjct: 513 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLATGGQDIRLDLRWL 572

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 ++A    N +  +   +L   +G        T +D  + S  S+ ++EI    +
Sbjct: 573 ------EMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSQGVEEITALYE 626

Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              + +A  +V  LV SE  D Y +A KP  LK  N    +  L    EV+  L  LL  
Sbjct: 627 ALDLAQAAREVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHP 681

Query: 465 FVPKLANKIFDILFVADE 482
            +P L ++++  L   +E
Sbjct: 682 MMPFLTSELYQALTGKEE 699


>gi|298675785|ref|YP_003727535.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288773|gb|ADI74739.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 1065

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 26/264 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+      T GY   P   K   ++WPAD    G D  R  F++    + +     P
Sbjct: 523 VWFDSAVASWATLGY---PQSEKDFHRWWPADFITEGHDQTRGWFYSQLGASMVAFEQSP 579

Query: 286 LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K V  HGF L K G+K+SKS GNV+DP+EV+++ G D LR +++   A   D  ++ +
Sbjct: 580 Y-KSVMMHGFTLDKYGKKMSKSQGNVVDPLEVVDKYGADTLRAYVLSTSAPWDDLKFNWE 638

Query: 345 GLKKRVNADLANGIGNLVSRSVS-MILKDYD----GMIPTPGAFTESDESILSVCSRVLQ 399
           G+ + V ++L N + N+    +  M+L ++D     M        + D+ ILS    V++
Sbjct: 639 GVNQ-VYSNL-NILWNVYRFPIPYMVLDNFDPKQVSMDSISKHLRKEDKWILSRMQSVIK 696

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDR--ASTVLYVTVE 453
           ++   M +  +H+A+  +   V E + R++      + W ++  +PD+  A  VLY   +
Sbjct: 697 DVDYAMSDYQLHKAIRAINEFVLEDLSRWYIQLIRPRTW-VESEDPDKLAAYRVLY---D 752

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V   L+ L+  F P +A +++  L
Sbjct: 753 VFVTLSKLIAPFTPHIAEEMYQNL 776


>gi|315924479|ref|ZP_07920700.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622183|gb|EFV02143.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 880

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 159/372 (42%), Gaps = 48/372 (12%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G  Y   H  V+ M  E +F  +    +  ++  +      +P ER  ++       ++D
Sbjct: 345 GHCYRC-HTTVETMTSEQWFVDMKPLAEPAIAAVQQSKTRFIP-ERFEKIYFNWMENVRD 402

Query: 207 LSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTN 237
             +SR+ + WG +IP                              DP  ++  W  +   
Sbjct: 403 WCISRQLW-WGHRIPAWTCDDCGELIVAEETPAVCPKCGHTHLTQDPD-VLDTWFSSALW 460

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFI 296
             +T G+ ++ D  K KF+P D+ V G DI+ F         + A   +P   V+ HG I
Sbjct: 461 PFSTIGWPEDTDDLK-KFYPNDVLVTGYDIIFFWVARMIFMGIDAMGEVPFSDVYIHGLI 519

Query: 297 LH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN IDP+EVIE+   DALR+ ++   + G D  + +D ++   N    
Sbjct: 520 RDAQGRKMSKSLGNGIDPLEVIEDYSADALRFAIITGNSAGNDIRWTQDKIESSRN--FL 577

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N  SR V M + +   +         +D+ ILS  ++ + E   NM+   +  A +
Sbjct: 578 NKIWN-ASRFVLMNMTEDTDLDVKNVRLELTDKWILSRLNQTIAEATANMEKYELGIAAS 636

Query: 416 QVISLV-SE-VDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLA 470
           ++     SE  D Y +  KP    + N D A +    L     V++ +  LL    P + 
Sbjct: 637 KIYDFTWSEFCDWYIEMVKP----RFNSDDAVSKKAALTTLNYVLQNILKLLHPVTPFIT 692

Query: 471 NKIFDILFVADE 482
            +I+  L  +D+
Sbjct: 693 EEIYHYLPASDK 704


>gi|291544503|emb|CBL17612.1| valyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 873

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 18/256 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W  +     +T G+ D+ +     F+P    V G DI+ F    W + ++ A +   K+
Sbjct: 451 TWFSSALWPFSTLGWPDHTE-ELDYFYPTSTLVTGYDIITF----WVSRMIVAGMAHMKE 505

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
                V  HG +   +G K+SKSLGN IDP+EVI++ G DALR+ L    A G D  Y  
Sbjct: 506 IPFDTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGADALRFMLATGNAPGNDMRYMD 565

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +K   N   AN + N  SR + M L +   +   P + T  D+ IL+  + + + + E
Sbjct: 566 EKVKASRN--FANKLWN-ASRFIMMNLPEDYELTGLPESLTIEDKWILTRFNDLCKAVTE 622

Query: 404 NMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           N+    +  A++++   + +V  D Y +  KP  +       ++    V V V++ +  L
Sbjct: 623 NLDKFELGIAVSKLYDFIWDVYCDWYIELTKPRIMAGGATKESAQA--VLVWVMQGMLKL 680

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 681 LHPFMPFITEEIWQAL 696



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +R K   +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        
Sbjct: 33  DRTKNPYTIVIPPPNITGQLHMGHALDETLQDILIRYRRMQGYCTLWLPGTDHASIATEA 92

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
           KI +A +  G+T     D     F   A      Y   I    K+   +C   W++  ++
Sbjct: 93  KIVEAMRKEGITKD---DIGRDGFLKRAWAWKEQYGGRIVEQLKKLGSSCD--WER--ER 145

Query: 117 GDIYKGCYSGWYSLRD--EAYYNDDEVYKG------ADGQYYNAQHNPVQWMEEEGYFFR 168
             + +GC     ++R+    YY +  +Y+G          + +  +  V++ E++G+F+ 
Sbjct: 146 FTMDEGCNR---AVREVFVRYYEEGLIYRGERIINWCPHCHTSISNAEVEFEEQDGFFWH 202

Query: 169 L 169
           L
Sbjct: 203 L 203


>gi|227824227|ref|ZP_03989059.1| valyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904726|gb|EEH90644.1| valyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 885

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 17/256 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W  +     +T G+ D  D  + +F+P  + V G DI+ F    W A +++  +   K+
Sbjct: 456 TWFSSGLWPFSTFGWPDKTDELQ-QFYPTSVLVTGYDIIFF----WVARMITMGMEFMKE 510

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
                VF HG +   +G K+SKSLGN IDP+EV+++ G D LR+ L+     G D  +  
Sbjct: 511 IPFKHVFIHGLVRDEQGRKMSKSLGNGIDPLEVVDKYGADTLRFMLITGNTPGNDMRFYW 570

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + ++   N   AN I N  SR   M L  YD         T +D  ILS     ++++  
Sbjct: 571 NRIEATRN--FANKIWN-ASRFALMNLDGYDASAKR-APLTLADRWILSRLQHTIKDVSS 626

Query: 404 NMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++   +  A   +   +  EV D Y +  KP    K +P+  ST  +V   V+     L
Sbjct: 627 FLEKFELGEAGRLIYDFIWGEVCDWYIELIKPRLYDKEHPEERSTAQFVLCRVLGDAMKL 686

Query: 462 LQAFVPKLANKIFDIL 477
           L  ++P +  +I+  L
Sbjct: 687 LHPYMPFITEEIWQHL 702


>gi|118443167|ref|YP_877806.1| valyl-tRNA synthetase [Clostridium novyi NT]
 gi|118133623|gb|ABK60667.1| valyl-tRNA synthetase [Clostridium novyi NT]
          Length = 879

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 128/266 (48%), Gaps = 18/266 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T GY +  +  +  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 450 VLDTWFSSALWPFSTLGYPEKTEDLEY-FYPTNTLVTGYDIIFF----WVARMIFSGLHS 504

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            KK+  +  ++H      +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  
Sbjct: 505 MKKIPFNTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           Y ++ ++   N   AN I N  SR V M L KD          +T +D+ ILS  + V++
Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMEKYKDCKEYTLADKWILSRINTVVK 621

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E  EN+    +  A  ++   +     D Y +  KP  L   +      VL V  EV+++
Sbjct: 622 EATENIDKFELGIAAQKIYDFMWNEFCDWYIELVKP-ALYGDDEKAKGVVLNVLNEVLKK 680

Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483
              LL   +P +  +I+  L   +E 
Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNTEET 706


>gi|193794350|gb|ACF21387.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794354|gb|ACF21389.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794458|gb|ACF21441.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFVFVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|304439719|ref|ZP_07399618.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371794|gb|EFM25401.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 896

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 19/233 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHKGEKISKSLG 308
           F+P D+ + G DI+ F    W + ++ ++L      P    +F+      +G K+SKSLG
Sbjct: 492 FFPTDVLITGYDIIFF----WVSRMIFSSLEQMGEVPFKDVLFTGLVNDAQGRKMSKSLG 547

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           N IDP+EVI++ G DALR+ LV   + G D  FY +   +   N + AN + N  SR V 
Sbjct: 548 NGIDPLEVIDKYGADALRFTLVTGNSPGNDMRFYYE---RVEANRNFANKLWN-ASRFVL 603

Query: 368 MILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424
           M L+D D   +    AFT+ D+ IL+     + E+  ++    I  A  ++   +     
Sbjct: 604 MNLEDSDQEKVLVVNAFTQEDKWILTKLQETIDEVTTHLDKYEIGLAANEIYDFIWNEYC 663

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D Y +  KP    + +P + +    V ++V++ +  LL  F+P +  +I+  L
Sbjct: 664 DWYIEMVKPRLYGEDSPSKTAAK-EVLLKVLKDILKLLHPFMPFITEEIYSHL 715


>gi|212697050|ref|ZP_03305178.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675825|gb|EEB35432.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 875

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 116/229 (50%), Gaps = 12/229 (5%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F+P D+ V G DI+ F  I   + +   +   P    +F+      +G K+SKSLGN +D
Sbjct: 471 FFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFTGLIRDPQGRKMSKSLGNGVD 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL 370
           PI+V+ + G DALR+ ++   + G D  YD    +KR+ A  + AN + N  +R V M +
Sbjct: 531 PIDVVNKYGADALRFTIITGNSPGNDMRYD----EKRIVASRNFANKLWN-ATRFVLMNI 585

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            + D +       +  D+ IL   + V++E+ +N+    I  A +++   + E   D Y 
Sbjct: 586 DESDDLEFKDLDLSLEDKWILKRLNNVVEEVSKNLDKYEIGLAASRIEDFIWEEFCDWYI 645

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   + ++ STV  V + V++ +  LL  F+P +  +I+  L
Sbjct: 646 EFAKE-RLNSDDENKKSTVKKVLLYVLKDMISLLHPFMPFITEEIYKQL 693



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 49/213 (23%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++K   +  +  PN   + H+GHA    I D++ R+ R+ G +  +  GTD      A  
Sbjct: 30  KDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDH-----ASI 84

Query: 62  AQNAGVTTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIR 96
           +  A V  K+  +  S++                          R +    D   D F  
Sbjct: 85  STEAKVVGKIKSEGKSKDELGRDKFLKECWDWTEEYGGTIKKQLRTVGVSCDWDRDSF-- 142

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN 155
           T +K      R ++KK+ D G IY+G     +    +   +D EVY K  +G  +  +  
Sbjct: 143 TMDKNLTRAVRKVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIK-- 200

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                    YFF  S   D+ ++   + PE +L
Sbjct: 201 ---------YFFEDS---DEYITIATTRPETML 221


>gi|325478556|gb|EGC81668.1| valine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 879

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 160/348 (45%), Gaps = 46/348 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++  +    +  Y++    ++P       ++++ + ++D ++SR+ + WG ++P   
Sbjct: 357 WFVKMDEFAQMCIDAYDNGEVTLIPDSLSKTYMNWL-NNIRDWTISRQLW-WGHRLPVFY 414

Query: 222 -DDPQYIMY-----------------------VWIDALTNYLTTTGYLDNPDGSKA--KF 255
            DD + I+                         W  +      T G+   PD ++    F
Sbjct: 415 TDDGEIIVSEDEPDENGMLNGVHVTQEEDTLDTWFSSALWPFATLGW---PDENEEFDYF 471

Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D+ V G DI+ F  I   + +   ++ +P    +F+      +G K+SKSLGN +DP
Sbjct: 472 FPTDILVTGYDIIFFWVIRMIFSSMYNTSKVPFHHVLFTGLIRDPQGRKMSKSLGNGVDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILK 371
           I+V+ E G DALR+ L+   + G D  YD    +KR+ A  + AN + N  SR V M ++
Sbjct: 532 IDVVNEYGADALRFTLITGNSPGNDMRYD----EKRILASRNFANKLWN-ASRFVLMNIE 586

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429
           + D +  +       D+ IL   + V+ ++ +N+    I  A  ++   +     D Y +
Sbjct: 587 EGDDLNFSGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRIEDFIWNEYCDWYIE 646

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K   L   + D  + V  V + V+R++  LL  F+P +  +IF  L
Sbjct: 647 FAKI-RLYGEDEDAKANVKKVLLYVLRKMLALLHPFMPFITEEIFAAL 693



 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 22/142 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQN-AGVTTKV 71
           H+GHA    I D++ R  R+ G + L+  GTD            KI+K  +  A +    
Sbjct: 49  HLGHALNNTIQDIIIRHKRMAGYEALWIPGTDHASISTESKVVDKISKEGKTKADLGRDG 108

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+++             +  R +    D  +D F  T +       + ++KK+ D G IY
Sbjct: 109 FLEEAWDWTHKYGGTIKQQLRTIGVSCDWDHDSF--TMDDNLTKAVKRVFKKMYDDGLIY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVY 142
           +G     +  + E   +D EVY
Sbjct: 167 RGNRIVNWDPKAETAISDAEVY 188


>gi|302386726|ref|YP_003822548.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197354|gb|ADL04925.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 879

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 16/228 (7%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +     +  LP    V  HG +   +G K+SKSLGN I
Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGIEQTGKLPF-HTVLIHGLVRDSEGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+EVIE+ G DALR  L+   A G D  FY      +RV A  + AN + N  SR + M
Sbjct: 535 DPLEVIEKYGADALRMTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 588

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            ++            T +D+ ILS  + + +++ EN+    +  AL +V   + E   D 
Sbjct: 589 NIEKAPDAKAELKELTIADKWILSKANTLAKDVTENLDKYELGIALQKVYDFIWEEFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  KP      +  +A+ +  +   +I  L  LL  ++P L  +IF
Sbjct: 649 YIEMVKPRLWDDEDKTKAAAIWTLKTVLINSLK-LLHPYMPFLTEEIF 695


>gi|169837555|ref|ZP_02870743.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
          isolate TM7a]
          Length = 75

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +  YI+T I YPNA PH+G AY  II D++AR+ RL G DV F TG DEHGQKI +AA+ 
Sbjct: 3  KSFYITTPIYYPNAAPHVGTAYTTIICDMVARYKRLTGYDVKFLTGVDEHGQKIQEAAEK 62

Query: 65 AGV 67
            +
Sbjct: 63 TDI 65


>gi|291296614|ref|YP_003508012.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471573|gb|ADD28992.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 868

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 59/370 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y +    PV+ +  E +F R+    +K+L   +      +P ER  +V       +KD +
Sbjct: 349 YSDRTKAPVEPLLLEQWFVRMKPVAEKVLEGLDKGEMRFVP-ERWEKVNRDWLENIKDWA 407

Query: 209 LSRKTFDWGIKIP----------------------DDPQY----------IMYVWIDALT 236
           ++R+ + WG +IP                       DP+Y          +   W  +  
Sbjct: 408 IARQLW-WGHQIPAWYDEEGNIYVPDPDNPDLDCDQDPRYAHLKLRRDEDVFDTWFSSAL 466

Query: 237 NYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              +T G+ D  PD    K++P D+ V G DI+     +W A +  +      +   H  
Sbjct: 467 WPFSTLGWPDATPD--LKKYYPTDVLVTGYDII----FFWVARMQMSGYQFTGRAPFHTI 520

Query: 296 ILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +LH      KG+K+SKS GN IDP+E+I++ G DA R+        G+D  +D+   ++ 
Sbjct: 521 VLHGLYLDAKGQKMSKSKGNGIDPLELIDKYGADACRFAWDYLATGGQDIRHDERRYEQG 580

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   AN + N  +R V  ++    G    P   T +D  ++S  +R + EI E  +   
Sbjct: 581 RN--FANKLYN-ATRFV--LMNKQAGRSSAPATPTLADRWMVSRLNRGIAEITEAYEAFD 635

Query: 410 IHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           + RA   V  LV SE  D Y +A KP  L++ N       L+     +  L  LL   +P
Sbjct: 636 LGRAARLVYELVWSEFCDWYLEAAKP-ALREGN----QATLHTLESTLATLLKLLHPIMP 690

Query: 468 KLANKIFDIL 477
            + +++++ L
Sbjct: 691 FITSELYEAL 700



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA +  I D + RF R+ G + L+  GTD           +AG+TT+V V++ 
Sbjct: 56  HLGHALDNTIIDTIIRFKRMQGYEALYLPGTD-----------HAGITTQVLVERE 100


>gi|193794526|gb|ACF21475.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPGELQDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|306819650|ref|ZP_07453313.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552295|gb|EFM40223.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 882

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 33/284 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANL 284
           ++  W  +    ++T GY +  +  +  F+P    V G DI+ F  I   + +  ++   
Sbjct: 448 VLDTWFSSALWPMSTLGYPEKTEEFE-HFFPTSTLVTGYDIIFFWVIRMVFSSLYITDKS 506

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYD 342
           P  K VF HG +   +G K+SKSLGN IDP+EVI+  G DALR+ L    + G D  +YD
Sbjct: 507 PF-KDVFIHGLVRDSQGRKMSKSLGNGIDPLEVIDSFGADALRFTLATGNSPGNDMRYYD 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-----SDESILSVCSRV 397
                +RV A  +    N +  S   IL + D  I       E     +D+ ILS  + V
Sbjct: 566 -----ERVTA--SRNFANKIWNSARFILMNLDEGIALSQEEIEKNLEIADKWILSRANSV 618

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+ ENM    +  A+ +V         D Y +  K       +       LY   +V+
Sbjct: 619 AREMTENMDKYELGIAVQKVYDFAWNEFCDWYIEMVKSRLYNYEDKTSKQVALYTLKKVL 678

Query: 456 RQLAILLQAFVPKLANKIFD--------ILFVA-----DENRCF 486
           + +  LL  F+P +  +I++        +L VA     DEN+ F
Sbjct: 679 KDILKLLHPFMPFVTEEIWEKFEDKEEPVLIVAKWVEYDENKNF 722



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 13/66 (19%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          PN   Q H+GHA +  + D+L RF R+ G D L+  GTD           +A + T+V V
Sbjct: 44 PNITGQLHMGHALDHTLQDILIRFKRMQGYDTLWQPGTD-----------HASIATEVKV 92

Query: 74 DQNSRN 79
           +  +N
Sbjct: 93 VEKIKN 98


>gi|20094860|ref|NP_614707.1| valyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74559149|sp|Q8TVG5|SYV_METKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19888087|gb|AAM02637.1| Valyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 914

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 23/263 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPA-FLLSANL 284
           +M  W+D+    L  TG+ D  PD       P DL   G DI+R    Y     L+ A+ 
Sbjct: 480 VMDTWMDSSITPLVITGWPDEEPD------LPVDLRPQGHDIIRTWLYYTTVRALVHADT 533

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              K++  +G +  + G K+SKS GNV++P EVIEE G DALRY+ V   A G D  Y  
Sbjct: 534 EPFKEILINGMVFGEDGYKMSKSRGNVVEPTEVIEEYGADALRYWAVSSGAPGSDVQYMT 593

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +K+      A  I N V R     + D   +    G  T +D  ILS   R++ E+ E
Sbjct: 594 KTIKR--GYRFAKKIWN-VCRLAKDHIDDAPSVEEVEGDLTPADRWILSKFHRLVDEVTE 650

Query: 404 NMQNQL-IHRALAQVISLVSE--VDRYFDAQK-----PWELKKTNPDRASTVLYVTVEVI 455
           ++++    + A+  +     E   D Y +  K     P EL + + + A  VL     V+
Sbjct: 651 HLESGYRFNDAIKAIEEFAWEELADDYLEMAKLRLYRPEELGEGSREAARAVLR---HVL 707

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  LL  F+P +  +++  LF
Sbjct: 708 DGLLRLLAPFMPFVTEELYYRLF 730



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AK 60
           ++R    I T   YP  + H+GH       DV+AR+ R+ G DV F  G D HG     K
Sbjct: 35  EDRPAFVIDTPPPYPTGELHMGHVLNWTYMDVVARYKRMCGYDVFFPQGWDCHGLPTEVK 94

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
             +  G+T +   D   R FR + +  +++ ++  +  E+     C I W
Sbjct: 95  VEEIHGITKR---DAPRREFRKLCE--ELTLENIRKMREQLIQLGCSIDW 139


>gi|68011250|ref|XP_671064.1| tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56486900|emb|CAH95866.1| tRNA ligase, putative [Plasmodium berghei]
          Length = 301

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 9/174 (5%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           K W   + VIGKDIL+FH I +   L S  + +P+ +  HG I ++ +K+SKSL N+I P
Sbjct: 133 KMWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKNENKKMSKSLNNIISP 192

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR----VNADLANGIGNLVSRSVSMI 369
             ++E+   D +R + +     G    Y+    K++        L N +GNL+ R VS+ 
Sbjct: 193 FRLLEKYNKDVIRLYFI-----GSGNIYEDKNFKEKNLESFELFLRNSVGNLLYRIVSLC 247

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           +++   +I     F  +  +        L ++ +NM+  L+   L   I  +++
Sbjct: 248 IENNYNIIKKNDLFNFTILNEFKNTKTYLIKLFDNMEYPLLLEKLMIFIKKINK 301



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 4/68 (5%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL- 245
           I P   + E+I  +++  K++ +SR   +WGIKIP++ +  +YVW +AL +Y+++  Y+ 
Sbjct: 1   ISPSYLKKEIIHHIQNDFKNICISRYNTEWGIKIPEEEKGTIYVWFEALLSYISSIFYVI 60

Query: 246 ---DNPDG 250
              DNP  
Sbjct: 61  KLYDNPKN 68


>gi|225376843|ref|ZP_03754064.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM
           16841]
 gi|225211339|gb|EEG93693.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM
           16841]
          Length = 891

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 10/229 (4%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +      P    +F HG +   +G K+SKSLGN I
Sbjct: 486 FYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF-HGLVRDSQGRKMSKSLGNGI 544

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M L+
Sbjct: 545 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFIMMNLE 601

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
             +   P       +D+ ILS  + + +++ ENM    +  A+ +V   + +   D Y +
Sbjct: 602 GAEIKTPALDELKAADKWILSRVNTLAKDVTENMDKFEMGIAVQKVYDFIWDEFCDWYIE 661

Query: 430 AQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K     K N P  A+   +    V+ +   LL  F+P +  +IF  L
Sbjct: 662 ITKVRTYNKENDPASANAAFWTLKTVLTEALKLLHPFMPFITEEIFCTL 710



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 30/199 (15%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ---- 56
           +R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD H      
Sbjct: 42  DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTD-HASIATE 100

Query: 57  -KIAKAAQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
            K+ ++ +  G+                  + + ++     + M    D   + F  T +
Sbjct: 101 VKVIQSLKEKGIDKADLGREGFLEKCWEWREEYGNRIINQLKKMGSSADWQRERF--TMD 158

Query: 100 KRHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           K   D  + ++ K+ +KG IYKG     W  +   +  + +  ++  DG +++  + PV 
Sbjct: 159 KGCSDAVQEVFIKLYEKGYIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINY-PV- 216

Query: 159 WMEEEGYFFRLSAYQDKLL 177
            + EEG F  ++  + + L
Sbjct: 217 -VGEEGRFVEIATTRPETL 234


>gi|320450562|ref|YP_004202658.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150731|gb|ADW22109.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 891

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 119/267 (44%), Gaps = 19/267 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLP 287
            W  +    L+T G+ +  +  KA F+P D+ V G DIL      +    +      P  
Sbjct: 484 TWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFRGERPF- 541

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +L  KG+K+SKS GNVIDP+E++E  G DALR+ L      G+D   D   L
Sbjct: 542 KTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLTTGGQDIRLDLRWL 601

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 ++A    N +  +   +L   +         T +D  + S  SR + EI    +
Sbjct: 602 ------EMARNFANKLYNAARFVLLSREAFQAKADEPTLADRFMQSRLSRGVAEITRLYE 655

Query: 407 NQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              + +A  +V  LV SE  D Y +A KP  LK  N    +  L    E +  L  LL  
Sbjct: 656 ALDLAQAAREVYELVWSEFCDWYLEASKP-ALKAGN----AFTLRTLEETLATLLKLLHP 710

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQ 491
            +P L ++++  L    E   F++  Q
Sbjct: 711 IMPFLTSELYQAL-TGKEELAFEAWPQ 736


>gi|160939307|ref|ZP_02086658.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438270|gb|EDP16030.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC
           BAA-613]
          Length = 879

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 9/225 (4%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVID 312
           F+P D+ V G DI+ F  I      L     LP   V  HG +   +G K+SKSLGN ID
Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKLPFHTVLIHGLVRDSEGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-ILK 371
           P+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M I K
Sbjct: 535 PLEVIDKYGADALRMTLITGNAPGNDMRFYWERVENSRN--FANKVWN-ASRFIMMNIEK 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                       T +D+ I+S  + + +E+ EN+    +  AL +V   + E   D Y +
Sbjct: 592 AAQSGEVALDRLTMADKWIVSKVNTLTREVTENLDKYELGIALQKVYDFIWEEFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             KP  L     D  +  ++    V+ Q   LL  F+P ++ +IF
Sbjct: 652 MVKP-RLYNEEDDTKAAAIWTLKHVLIQALKLLHPFMPFISEEIF 695



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTD--------- 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +A + T+V V    +  ++  D  D+  D F++   K
Sbjct: 84  --HAAIATEVKVIDKLK--KEGVDKADLGRDGFLKECWK 118


>gi|326692181|ref|ZP_08229186.1| valyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 894

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ ++  G  A+++P +  V G DI+ F    W A ++  
Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPEDTTGDYARYYPTNTLVTGYDIIFF----WVARMMFQ 510

Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   P  K V  HG I   +G K+SKSLGN +DP++VIE+ G DALR+FL      
Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTP 569

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394
           G+D  +  D +    N    N I N  SR V M L +D    +P     T +D+ ILS  
Sbjct: 570 GQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLSEDTPSTLPDLDKLTLADQWILSRL 626

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449
           +  ++ +  N        A  ++ + +     D Y +  K  E    + D+A    T+ Y
Sbjct: 627 NTTVENVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDGDKAPVQQTLAY 684

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V  + +R    LLQ  +P +   I+
Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71
           H+GHA++  + D++ R  ++ G+DVL+  G D  G     K+ +  +  GV+      + 
Sbjct: 59  HLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAKVEQRLRGEGVSRYDLGREK 118

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FV+Q             + +  M   LD   + F  T ++  +     ++  + +KG IY
Sbjct: 119 FVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERF--TLDEGLNKAVNKVFIDLYNKGLIY 176

Query: 121 KGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +G Y   W      A  + + +Y+  +G +Y+ ++
Sbjct: 177 RGEYIINWDPQARTALSDIEVIYQDDEGAFYHVKY 211


>gi|291519933|emb|CBK75154.1| valyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 848

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 11/235 (4%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P ++ V G DI+ F  I   +  +  +   P    V  HG +   +G K+SKSLGN I
Sbjct: 478 FYPTNVLVTGYDIIFFWVIRMVFSGYAHTGKSPF-NTVLIHGLVRDSQGRKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           DP+E+I++ G DALR  L+   A G D  FY++     R   + AN + N  SR + M L
Sbjct: 537 DPLEIIDKYGADALRLTLITGNAPGNDMRFYNERVENSR---NFANKVWN-ASRFIMMNL 592

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            D +   P        D+ I+S  + + +++ ENM    +  A+ +V   + +   D Y 
Sbjct: 593 ADNEVTEPAESELATEDKWIISAVNTLAKDVTENMDKYELGIAVQKVYDFIWDQFCDWYI 652

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  KP           +  L+     +     +L  F+P +  +IF  L   +E 
Sbjct: 653 EIVKPRMYSTEYTASKNAALWTAKFALTNALKMLHPFMPFITEEIFCTLQSEEET 707


>gi|116491375|ref|YP_810919.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116092100|gb|ABJ57254.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 902

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 18/273 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280
           DP  ++  W  +     +T G+ D  +    +F+P    V G DI+ F    + + A   
Sbjct: 462 DPD-VLDTWFSSALWPFSTLGWPDTNNSDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEF 520

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  K V  HG I   KG K+SKSLGN IDP++VI + G DALR+FL      G+D 
Sbjct: 521 TGTRPF-KNVLIHGLIRDSKGRKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDL 579

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVL 398
            +  D +    N    N I N VSR V M L+ D    +P     T +D+ ILS  +  +
Sbjct: 580 NFSNDKMDSAWN--FINKIWN-VSRYVLMNLETDTKIELPDRNLLTLADKWILSRLNSTI 636

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVE 453
           + + +N        A  Q+ + + +   D Y +  K    +  N D A     V  V   
Sbjct: 637 ENVTKNFDKFEFGEAGRQLYNFIWDDFADWYIEMTK----ETLNDDSALNKRPVQQVLAY 692

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           V+ Q   LL   +P +   I+  L    +N+  
Sbjct: 693 VLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQSL 725



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 51  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEARLR 110

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVD+               +  M   LD S + F  T +K  ++  R
Sbjct: 111 EDGISRYDLGREKFVDKVWQWKDEYASIIKEQWAKMGLSLDFSRERF--TLDKGLNEAVR 168

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 169 KVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 216


>gi|118586620|ref|ZP_01544060.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|118432935|gb|EAV39661.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 918

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 18/273 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280
           DP  ++  W  +     +T G+ D  +    +F+P    V G DI+ F    + + A   
Sbjct: 478 DPD-VLDTWFSSALWPFSTLGWPDTNNSDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEF 536

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  K V  HG I   KG K+SKSLGN IDP++VI + G DALR+FL      G+D 
Sbjct: 537 TGTRPF-KNVLIHGLIRDSKGRKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDL 595

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVL 398
            +  D +    N    N I N VSR V M L+ D    +P     T +D+ ILS  +  +
Sbjct: 596 NFSNDKMDSAWN--FINKIWN-VSRYVLMNLETDTKIELPDRNLLTLADKWILSRLNSTI 652

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVE 453
           + + +N        A  Q+ + + +   D Y +  K    +  N D A     V  V   
Sbjct: 653 ENVTKNFDKFEFGEAGRQLYNFIWDDFADWYIEMTK----ETLNNDSALNKRPVQQVLAY 708

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           V+ Q   LL   +P +   I+  L    +N+  
Sbjct: 709 VLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQSL 741



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 67  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEARLR 126

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVD+               +  M   LD S + F  T +K  ++  R
Sbjct: 127 EDGISRYDLGREKFVDKVWQWKDEYASIIKEQWAKMGLSLDFSRERF--TLDKGLNEAVR 184

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 185 KVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 232


>gi|238924929|ref|YP_002938445.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876604|gb|ACR76311.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|291527316|emb|CBK92902.1| valyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 882

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 16/232 (6%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +      P    +F HG +   +G K+SKSLGN I
Sbjct: 477 FYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF-HGLVRDSQGRKMSKSLGNGI 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  SR + M
Sbjct: 536 DPLEVIDKYGADALRLTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 589

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L+  +   P       +D+ ILS  + + ++  ENM    +  A+ +V   + +   D 
Sbjct: 590 NLEGVELREPKLDELHAADKWILSRVNTLAKDATENMDKFELGIAVQKVYDFIWDEFCDW 649

Query: 427 YFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K    KK  NP+ A+  L+    V+     LL  ++P +  +IF  L
Sbjct: 650 YIEIAKVRTYKKDENPESANAALWTLKTVLVNALKLLHPYMPFITEEIFCTL 701



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 28/198 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEV 92

Query: 57  KIAKAAQNAGV-----TTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEK 100
           K+ +A +  G+     T + F+++             +  R +    D   + F  T ++
Sbjct: 93  KVIQALKEQGINKADLTREEFLEKCWDWRKEYGGRIVKQLRKLGSSADWQRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                 + ++ K+  KG IYKG     W  +   +  + +  ++  DG +++  + PV  
Sbjct: 151 GCSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINY-PV-- 207

Query: 160 MEEEGYFFRLSAYQDKLL 177
           + EEG F  ++  + + L
Sbjct: 208 VGEEGRFVEIATTRPETL 225


>gi|291525950|emb|CBK91537.1| valyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 882

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 16/232 (6%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +      P    +F HG +   +G K+SKSLGN I
Sbjct: 477 FYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF-HGLVRDSQGRKMSKSLGNGI 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  SR + M
Sbjct: 536 DPLEVIDKYGADALRLTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 589

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L+  +   P       +D+ ILS  + + ++  ENM    +  A+ +V   + +   D 
Sbjct: 590 NLEGVELREPKLDELHAADKWILSRVNTLAKDATENMDKFELGIAVQKVYDFIWDEFCDW 649

Query: 427 YFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K    KK  NP+ A+  L+    V+     LL  ++P +  +IF  L
Sbjct: 650 YIEIAKVRTYKKDENPESANAALWTLKTVLVNALKLLHPYMPFITEEIFCTL 701



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 28/198 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +R K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEV 92

Query: 57  KIAKAAQNAGV-----TTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEK 100
           K+ +A +  G+     T + F+++             +  R +    D   + F  T ++
Sbjct: 93  KVIQALKEQGINKADLTREEFLEKCWDWRKEYGGRIVKQLRKLGSSADWQRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                 + ++ K+  KG IYKG     W  +   +  + +  ++  DG +++  + PV  
Sbjct: 151 GCSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINY-PV-- 207

Query: 160 MEEEGYFFRLSAYQDKLL 177
           + EEG F  ++  + + L
Sbjct: 208 VGEEGRFVEIATTRPETL 225


>gi|16332082|ref|NP_442810.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501067|sp|Q55522|SYV_SYNY3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1001391|dbj|BAA10881.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 910

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 28/285 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +     +T G+ +  D   AK++P    V G DI+ F    W A
Sbjct: 455 VQLQQDPD-VLDTWFSSGLWPFSTMGWPEQTD-DLAKYYPTSTLVTGFDIIFF----WVA 508

Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       +  +P  K V+ HG +    G+K+SKS  N IDP+ +I + G DALRY L+
Sbjct: 509 RMTMMAGHFTGQIPF-KDVYIHGLVRDENGKKMSKSANNGIDPLLLINKYGTDALRYTLI 567

Query: 331 REIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAF 383
           RE+A  G+D     D  K +  + + +    N +  +   ++ + DG  P      PG  
Sbjct: 568 REVAGAGQDISLQYDRQKDESESVEASRNFANKLWNAARFVMMNLDGQTPQQLGLAPGED 627

Query: 384 TE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
            E +D  ILS  ++V+Q+ RE +++  +  A   +   +     D Y +  KP    K  
Sbjct: 628 LELADRWILSRLNQVIQQTREQIEDYGLGEAAKGLYEFIWGDFCDWYIELAKPRLWNKEG 687

Query: 441 PDRASTVLYVTVEVIRQ----LAILLQAFVPKLANKIFDILFVAD 481
            D  +    V  +V+      +  LL  F+P +  +++  L  A+
Sbjct: 688 GDVGTQRQLVARQVLAHTLDSIIKLLHPFMPHITEELWQTLHQAE 732



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 53 HMGHAFESSLIDTLVRYHRMRGDNTLWLPGTD 84


>gi|193794432|gb|ACF21428.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELQDIDRALLDAVEAGFASVGEFIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|154499847|ref|ZP_02037885.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
 gi|150271445|gb|EDM98702.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
          Length = 896

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 23/269 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           IK  DD   ++  W  +     +T G+ D        F+P D+ V G DI+ F    W A
Sbjct: 445 IKQEDD---VLDTWFSSALWPFSTLGWPDENSEDYKYFYPTDVLVTGYDIIFF----WVA 497

Query: 278 FLLSANL-----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++ +       P    VF HG +   KG K+SKSLGN IDP+E+ E+ G DALR+ LV 
Sbjct: 498 RMIFSACEHTGKPPFHTVFIHGLVRDDKGRKMSKSLGNGIDPLEIAEKYGADALRFNLVT 557

Query: 332 EIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
             + G D  FY +     R   + AN I N  SR + M L      +P        D  I
Sbjct: 558 GNSPGNDMRFYTERCEAMR---NFANKIWN-ASRFLMMNLTIDKCELPE--KLEMEDRWI 611

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
           LS  + ++ E+ ENM    +  A  ++   +  S  D Y +  K   L+  + +      
Sbjct: 612 LSKLNSLIPEMTENMDKYELGVAAQKIYDFIWDSYCDWYIELTKA-RLQGDDEEAKVNAQ 670

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V   V+ Q+  LL  F+P +  +I+  L
Sbjct: 671 KVLCYVLTQILKLLHPFMPFITEEIWQAL 699



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 14/82 (17%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L RF R++G   L+  GTD           +AG+ T++ V
Sbjct: 46  PNVTGQLHMGHAMDSTLQDILIRFKRMEGYAALWVPGTD-----------HAGIATQIKV 94

Query: 74  DQNSRNFRDMADVLDISYDDFI 95
           ++  R    +    D+  D F+
Sbjct: 95  EEELRKNEGLTR-YDLGRDKFL 115


>gi|270666769|ref|ZP_06222445.1| methionine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316829|gb|EFA28560.1| methionine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 148

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 7/148 (4%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWP----ADL-HVIGKDILRFHAI 273
           IP       YVW+DA   Y+ +   L + +G    +FW     A+L H IGKDI+ FH++
Sbjct: 1   IPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHSL 60

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+   ++
Sbjct: 61  FWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKL 120

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGN 360
               +D  ++ D   +RVN D+ N + N
Sbjct: 121 NDRIEDLDFNLDDFVQRVNTDIVNKLVN 148


>gi|302507468|ref|XP_003015695.1| hypothetical protein ARB_06006 [Arthroderma benhamiae CBS 112371]
 gi|291179263|gb|EFE35050.1| hypothetical protein ARB_06006 [Arthroderma benhamiae CBS 112371]
          Length = 710

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 115/515 (22%), Positives = 210/515 (40%), Gaps = 59/515 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  + I++A+ + N  PH+G+    II         +   D   + GTDE+G      A 
Sbjct: 114 QRNILITSALPFVNNVPHLGN----IIGGRGINTLYVGAPDYQLSLGTDEYGTTTEAKAL 169

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G + +  
Sbjct: 170 AENCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLEKNGFLEERM 229

Query: 124 YSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPV----QWMEE---------------- 162
            +  Y     ++  D  V  +  D  Y NA+ +      Q +E                 
Sbjct: 230 TTQLYCEEHHSFLADRFVEGECPDCGYANARGDQCDLCGQLLESLQLRNPRCKIDGSTPV 289

Query: 163 ----EGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               +  F  L   Q K+ ++++ S               S++K GLK  S++R    WG
Sbjct: 290 TRDTKHIFLELDKLQTKVENFFQDSTANGSWSNNGAVITTSWLKEGLKPRSITRD-ISWG 348

Query: 218 IKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDIL 268
            ++P  P Y   ++Y W DA   Y++ T  Y D  +    ++W  P D+ +   IGKD +
Sbjct: 349 TRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRSPKDVQLYQFIGKDNV 403

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDAL 325
            FH++ +PA  +       K   + +  ++ ++G K SKS G  V         +  D  
Sbjct: 404 VFHSVIFPASQIGTEDTWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPTDIW 463

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPT----- 379
           R FL+       D  +  D L    N  L   +GN VSR +  +  + Y+ ++P      
Sbjct: 464 RCFLLSHRPETGDSEFTWDALVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIVPNWTQYY 523

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438
            G+F    E I    +R+L +    +    I  A + V+ +  + + +    +    L K
Sbjct: 524 EGSFATFKEEI----NRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAK 579

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             P + + V+ +    +  LA L+  ++P  AN I
Sbjct: 580 NEPSKCAAVIGIATNTVHLLASLVAPYMPDTANSI 614


>gi|193794348|gb|ACF21386.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGEFIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|163813949|ref|ZP_02205343.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
 gi|158450819|gb|EDP27814.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
          Length = 920

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 10/225 (4%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+P  + V G DI+ F  I   + A   +   P  K V  HG +   +G K+SKSLGN I
Sbjct: 516 FYPTSVLVTGYDIIFFWVIRMVFSALEQTGKSPF-KHVLIHGLVRDDQGRKMSKSLGNGI 574

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN I N  +R + M ++
Sbjct: 575 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN--FANKIWN-ATRFIMMNME 631

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
             D         T +D  ILS  + + +E+ +NM+   +  A+++V   + E   D Y +
Sbjct: 632 KADFSAVKLSDLTIADRWILSKVNTLAKEMTDNMEKFELGIAVSKVYDFIWEEFCDWYIE 691

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             KP  L     +  +  L+    V+ Q   LL  ++P +  +IF
Sbjct: 692 MVKP-RLYNDEDETKAAALWTLKTVLIQALKLLHPYMPFITEEIF 735



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 28/198 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +R K   +  +  PN   Q H+GHA +  + D+L RF R+ G   L+  GTD        
Sbjct: 72  DRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDHAAIATEV 131

Query: 57  KIAKAAQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
           K+ +  +  G+  K                 + ++     + M    D   + F  T ++
Sbjct: 132 KVTEKLKEQGIDKKEIGREEFLKHAWAWKEEYGNRIVSQLKKMGSSADWDRERF--TMDE 189

Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                 + ++ ++ DKG IYKG     W  +   +  + + +++  DG +++  + PV  
Sbjct: 190 GCSRAVKEVFVRLYDKGYIYKGSRIINWCPVCKTSISDAEVIHEEQDGYFWHINY-PV-- 246

Query: 160 MEEEGYFFRLSAYQDKLL 177
           + E G F  ++  + + L
Sbjct: 247 VGEPGRFVEIATTRPETL 264


>gi|331002328|ref|ZP_08325846.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330410144|gb|EGG89578.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 880

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 15/252 (5%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ DN +     F+P D+ V G DI+ F  +   +  +  +   P  
Sbjct: 452 TWFSSALWPFSTLGWPDNTE-EMDYFYPTDVLVTGYDIIFFWVVRMVFSGYEQTGKTPF- 509

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             V  HG +   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + +
Sbjct: 510 HTVLIHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMMLMTGNAPGNDMRFYYERV 569

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +   N   AN I N  +R + M + +             SD+ ILS  +R+++E+  N+ 
Sbjct: 570 ESARN--FANKIWN-AARLIMMNIGESKPEAIDSSKLMISDKWILSKSNRLVKEVTTNLD 626

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILL 462
              +  ALA++     E   D Y +  K   W  +  + D A +VL   + +I +   LL
Sbjct: 627 KYELGIALAKIYDFAWEEFCDWYIEMVKVRLWNKEDESRDTALSVLTYVLNIILK---LL 683

Query: 463 QAFVPKLANKIF 474
             F+P +  +I+
Sbjct: 684 HPFMPFITEEIY 695


>gi|315651962|ref|ZP_07904964.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485791|gb|EFU76171.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 880

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 11/250 (4%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ D+    K  F+P D+ V G DI+ F  +   +  +  +   P  
Sbjct: 452 TWFSSALWPFSTLGWPDDTPEMKY-FYPTDVLVTGYDIIFFWVVRMVFSGYEQTGKSPF- 509

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + +
Sbjct: 510 KTVLIHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMMLITGNAPGNDMRFYYEKV 569

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +   N   AN I N  +R + M + +             SD+ ILS  ++++ E+  N+ 
Sbjct: 570 ESARN--FANKIWN-AARLIMMNIGESKPEAIDGSKLMLSDKWILSKTNKLINEVSTNLD 626

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              +  AL+++     E   D Y +  K   L     D   T L V + V+  +  LL  
Sbjct: 627 KFELGIALSKIYDFAWEEFCDWYIEMVK-LRLWNKEDDTKDTALAVLIYVLNTILKLLHP 685

Query: 465 FVPKLANKIF 474
           F+P +  +I+
Sbjct: 686 FMPFITEEIY 695


>gi|323704372|ref|ZP_08115951.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536438|gb|EGB26210.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 878

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 59/315 (18%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWID 233
             +KD  +SR+ + WG +IP              +DP              + ++  W  
Sbjct: 396 ENIKDWCISRQLW-WGHRIPAWYCDDCGHVNVSKNDPVCCEKCGSKNIHQDEDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK----- 288
           +     +T G+ +  +  K  F+P D+ V G DI+ F    W A ++  +L   K     
Sbjct: 455 SALWPFSTMGWPEETEDLKY-FFPTDVLVTGYDIIFF----WVARMIFMSLEFMKEVPFR 509

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +V  HG +   +G K+SKSLGN IDP+E+IE+ G D LR+ L+   A G D  +  D  K
Sbjct: 510 RVLIHGLVRDSQGRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGNDMRFSDD--K 567

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              + + AN + N  SR V + L   D  +        +D+ IL+  + V++E+ EN++ 
Sbjct: 568 VEASRNFANKLWN-ASRYVMLNLTSDDTTLYLEN-LNIADKWILTRLNDVVKEVTENLEK 625

Query: 408 QLIHRALAQVIS-LVSE-VDRYFDAQKP------WELKKTNPDRASTVLYVTVEVIRQLA 459
             +  A  ++   L SE  D Y +  KP      +E KK      S + YV    +R   
Sbjct: 626 YELGIAAGKLYDFLWSEFCDWYIELSKPVLYGDDFEAKKIT---KSVLRYVLDNTLR--- 679

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P +  +IF
Sbjct: 680 -LLHPFMPFITEEIF 693


>gi|227499878|ref|ZP_03929971.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217987|gb|EEI83260.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 879

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 42/343 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++  +    +  Y+     ++P       ++++ + ++D ++SR+ + WG ++P   
Sbjct: 357 WFVKMDDFAKMCIEAYDKGEVKLIPDSLSKTYMNWL-NNIRDWTISRQLW-WGHRLPVFY 414

Query: 222 -DDPQYIMY-----------------------VWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            DD + I+                         W  +      T G+  N +     F+P
Sbjct: 415 TDDGEVIVSEDEPDENGMLNGIHVTQDEDTLDTWFSSALWPFATLGW-PNENEEYDYFFP 473

Query: 258 ADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            D+ V G DI+ F  I   + +   +  +P    +F+      +G K+SKSLGN +DPI+
Sbjct: 474 TDILVTGYDIIFFWVIRMIFSSVYNTGEVPFSHVLFTGLIRDSQGRKMSKSLGNGVDPID 533

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDY 373
           V+ E G DALR+ L+   + G D  YD    +KR+ A  + AN + N  SR V M ++D 
Sbjct: 534 VVNEYGADALRFTLITGNSPGNDMRYD----EKRILASRNFANKLWN-ASRFVLMNIEDG 588

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
           D +  T       D+ IL   + V+ ++ +N++   I  A  ++   +     D Y +  
Sbjct: 589 DDLEFTGENLELEDKWILKRLNDVIVDVTKNLEKYEIGLAADRIEDFIWNEYCDWYIEFA 648

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           K   L   + +    V  V + V++ + ILL  F+P +  +I+
Sbjct: 649 KI-RLYGDDKEAKKNVKKVLLYVLKNMLILLHPFMPFITEEIY 690



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVT- 68
           H+GHA    I D++ R+ RL G + L+  GTD           +KIA   K  Q+ G   
Sbjct: 49  HLGHALNNTIQDIIIRYKRLAGFEALWIPGTDHASISTESKVVEKIAGEGKTKQDLGREG 108

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   T  +  +     R +    D  +D F  T ++      + ++KK+ D G IY
Sbjct: 109 FLEEAWDWTHKYGGRIKEQLRTIGVSCDWDHDSF--TMDENLTRAVKKVFKKMYDDGYIY 166

Query: 121 KG-CYSGWYSLRDEAYYNDDEVY 142
           +G     W  L + A  +D EVY
Sbjct: 167 RGDRIVNWDPLAETA-ISDAEVY 188


>gi|168187608|ref|ZP_02622243.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294536|gb|EDS76669.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 879

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 18/266 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T GY +  +  +  F+P    V G DI+ F    W A ++ + L  
Sbjct: 450 VLDTWFSSALWPFSTLGYPERTEDLEY-FYPTSTLVTGYDIIFF----WVARMIFSGLHS 504

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            KK     V  HG +   +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  
Sbjct: 505 MKKIPFDTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           Y ++ ++   N   AN I N  SR V M L KD          +T +D+ ILS  + V++
Sbjct: 565 YYEEKVEAARN--FANKIWN-ASRFVMMNLDKDLMEKYKDCKEYTLADKWILSRINTVVK 621

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E  EN+    +  A  ++   +     D Y +  KP  L   +      VL V  EV+++
Sbjct: 622 EATENIDKFELGIAAQKIYDFMWNEFCDWYIELVKP-ALYGDDEKAKGVVLNVLNEVLKK 680

Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483
              LL   +P +  +I+  L   +E 
Sbjct: 681 GLKLLHPVMPFITEEIYTNLPNTEET 706


>gi|282162890|ref|YP_003355275.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155204|dbj|BAI60292.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 1105

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 19/275 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I  VW D+      T  +    D     +WPAD  V G D  R  F++      +     
Sbjct: 569 IFDVWFDSAVASWATLRFPQRKD--LMDWWPADFIVEGHDQTRGWFYSQLGAGMVGFGKA 626

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V  HGF L  +G K+SKSLGNV+ P EV+E+ G DALR +++ + A  +D  +  
Sbjct: 627 PY-NSVCMHGFTLDDQGRKMSKSLGNVVAPEEVLEKFGADALRLYVLSQSAPWEDLSFSW 685

Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
           D           N   N+    +  M+L  +D    T G+  E     D  ILS    V+
Sbjct: 686 DECGNVYRT--LNIFWNVYRFPLPYMVLDKFDPTKTTYGSVKEHLRVEDRWILSRLQAVI 743

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +E+ E M    +HR+   +I+ + E + R++     ++ W ++  +PD+ +   +V   V
Sbjct: 744 KEVNEGMATYELHRSTRALINFILEDLSRWYVQLSRERTW-VEANDPDKLAA-YWVLYHV 801

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +     L+  + P +A +++  L    E   ++S+
Sbjct: 802 LSNTVKLMAPYTPYMAERMYQNLVRNSEPSAWESV 836



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 23/161 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ----- 56
           K  +K Y      Y   + H+G A+  II D + R+  ++G D++   G D HG      
Sbjct: 36  KGNKKFYFVDGPPYTTGRIHLGTAWNKIIKDSVLRYRSMNGFDLMDRAGWDMHGLPIEVK 95

Query: 57  -------KIAKAAQNAGVT-----TKVFVDQNSR----NFRDMADVLDISYDDFIRTTEK 100
                  K  K  +N GV       K F  +N R     F+ +   LD  +DD   T + 
Sbjct: 96  VESLLGFKTKKDIENYGVAQFTEKCKAFAIENMREMTGQFKKLGVWLD--WDDPYMTLKN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            + +      K+  +K  + +G  +  +  R E    D EV
Sbjct: 154 EYIEAAWWTIKQAHEKKLLERGLRNVNWCPRCETAIADSEV 194


>gi|256545439|ref|ZP_05472801.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398835|gb|EEU12450.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 875

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 41/309 (13%)

Query: 202 SGLKDLSLSRKTFDWGIKIP-------------DDPQYIMYV--------------WIDA 234
             ++D  +SR+ + WG ++P             DDP    Y+              W  +
Sbjct: 393 ENIRDWCISRQLW-WGHRLPVFYTEDGEIIVSEDDPDENGYLDGKKVTQEEDTLDTWFSS 451

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFS 292
                 T G+ +  +  K  F+P D+ V G DI+ F  I   + +   +   P    +F+
Sbjct: 452 ALWPFATLGWPEETEDYKY-FFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFT 510

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DPI+V+ + G DALR+ ++   + G D  YD    +KR+ A
Sbjct: 511 GLIRDPQGRKMSKSLGNGVDPIDVVNKYGADALRFTIITGNSPGNDMRYD----EKRIVA 566

Query: 353 --DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             + AN + N  +R V M + + D +       +  D+ IL   + V++E+ +N+    I
Sbjct: 567 SRNFANKLWN-ATRFVLMNVDENDDIEFKNLDLSLEDKWILKRLNNVVEEVSKNLDKYEI 625

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A +++   + E   D Y +  K   L   + ++ +TV  V + V++ +  LL  F+P 
Sbjct: 626 GLAASRIEDFIWEEFCDWYIEFAKE-RLNSDDDNKKATVKKVLLYVLKDMISLLHPFMPF 684

Query: 469 LANKIFDIL 477
           +  +I+  L
Sbjct: 685 ITEEIYKQL 693



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 39/196 (19%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT- 68
           PN   + H+GHA    I D++ R+ R+ G +  +  GTD        K+ +  +N G + 
Sbjct: 42  PNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDHASISTEAKVVEKIKNEGKSK 101

Query: 69  ---------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
                          T+ +     R  R +    D   D F  T +K      R ++KK+
Sbjct: 102 DDLGRDKFLEECWDWTEEYGGTIKRQLRTVGVSCDWDRDSF--TMDKNLTRAVRKVFKKM 159

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            D+G IY+G     +    +   +D EVY K  +G  +  +           YFF  S  
Sbjct: 160 YDEGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWYIK-----------YFFEDS-- 206

Query: 173 QDKLLSYYESHPEFIL 188
            D+ ++   + PE +L
Sbjct: 207 -DEFITIATTRPETML 221


>gi|258516479|ref|YP_003192701.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780184|gb|ACV64078.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 881

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 24/273 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G ++  DP  ++  W  +     +T G+       K  F+P  + V G+DI+ F    W 
Sbjct: 441 GTQLEQDPD-VLDTWFSSALWPFSTLGWPSETAELK-HFYPTSVLVTGRDIIFF----WV 494

Query: 277 AFLLSANLP----LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++ + L     +P ++VF HG +L   G K+SKSLGN IDPI++IE  G D+LR+ LV
Sbjct: 495 ARMIFSGLEFMEEVPFREVFIHGLVLDALGRKMSKSLGNGIDPIDLIESHGADSLRFMLV 554

Query: 331 REIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTES 386
                G D    F   DG +     + AN + N  SR   M L DYD   P     ++ +
Sbjct: 555 TGNTPGNDLRFHFERLDGAR-----NFANKLWN-ASRFSLMNLSDYDPEKPVDSQDYSLA 608

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D  ++S     ++ + +N++   +  A   +   +     D Y +  KP    K      
Sbjct: 609 DRWMISRYQATVKSVTKNLEAYELGEAARSLYEFIWGEFCDWYLELIKPRVYGKEGEKAR 668

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            T   V   V++    LL  F+P +  +I+  L
Sbjct: 669 HTAQRVLASVLKGTLELLHPFMPFITEEIWQHL 701



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 24/148 (16%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT- 68
           PN   Q H GHA +  + D+L RF R+ G + L+  GTD  G     K+ +     G T 
Sbjct: 47  PNVTGQLHGGHALDNTLQDILTRFRRMQGCNTLWLPGTDHAGIATQAKVEEQLAQEGTTK 106

Query: 69  ---------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
                           + +  + +   R +    D   + F  T ++      R ++ ++
Sbjct: 107 HELGREKFLERVWAWKERYGGRITHQLRRLGASCDWERERF--TMDEGCSSAVREVFIRL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +KG IY+G Y   +  +     +D EV
Sbjct: 165 YEKGLIYRGNYITNWCPKCHTTISDIEV 192


>gi|193794300|gb|ACF21362.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794310|gb|ACF21367.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794324|gb|ACF21374.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794376|gb|ACF21400.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794450|gb|ACF21437.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794470|gb|ACF21447.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794474|gb|ACF21449.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|302391303|ref|YP_003827123.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203380|gb|ADL12058.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 883

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNV 310
           P  + V G+DI+ F    W A ++ + L   ++     V  HG +   +G K+SKSLGN 
Sbjct: 480 PTSVLVTGRDIIFF----WVARMIFSGLEFMEETPFSDVLVHGLVRDAQGRKMSKSLGNG 535

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPIE I+E G D LR+ LV     G D  + ++ ++   N    N I N  SR V M L
Sbjct: 536 IDPIEFIDEYGADTLRFTLVTGNTPGNDMRFRQEKVEASRN--FVNKIWN-ASRFVLMNL 592

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +D+D        +T +D+ I+S  +   QE+   +    I  A   +   +     D Y 
Sbjct: 593 EDFDPEEVEELDYTLADKWIISRLNETAQEVTRTLDKYQIGNAAQTLYDFIWNEFCDWYI 652

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  KP   +  +     T  YV   V+ Q   LL  F+P +  +I+  L
Sbjct: 653 ELIKPRLYQDEDQVVKETAQYVVSSVLEQSLRLLHPFMPFVTEEIWQKL 701


>gi|326791024|ref|YP_004308845.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541788|gb|ADZ83647.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 880

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ +N +  K  F+P  + V G DI+ F  I   +        +P  
Sbjct: 451 TWFSSALWPFSTLGWPENTEELK-HFYPTSVLVTGYDIIFFWVIRMVFSGIEQMGEIPF- 508

Query: 288 KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
           K V  HG +    G K+SKSLGN +DP+EVIE+ G DALR  LV   A G D  FY    
Sbjct: 509 KDVLFHGLVRAADGRKMSKSLGNGVDPLEVIEKYGADALRLTLVTGNAPGNDMRFY---- 564

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDESILSVCSRVLQEI 401
             +RV A+     GN +  +   I+ +Y+G    +         +D+ ILS  + + +E+
Sbjct: 565 -YERVEAN--RNFGNKLWNAARFIMMNYEGEDINLTVDLKDLIPADKWILSKVNTLAKEV 621

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            +NM    +  A+ ++     E   D Y +  KP    K +  R +  L+    V+ Q+ 
Sbjct: 622 TDNMDKYDLGVAVQKLYDFAWEEFCDWYIEMVKPRLYNKEDVTRPAA-LWTLKTVMTQIL 680

Query: 460 ILLQAFVPKLANKIF 474
            +L  ++P +  +IF
Sbjct: 681 KMLHPYMPFITEEIF 695



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          E++K   +  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 32 EKDKKPFTIVMPPPNITGQLHMGHALDNTLQDILTRYKRMQGFNTLWVPGTD 83


>gi|256378249|ref|YP_003101909.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
 gi|255922552|gb|ACU38063.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
          Length = 645

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 165/405 (40%), Gaps = 55/405 (13%)

Query: 16  PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN   H+GH A   + ADVL R  R  G D    TGTD+H   +A +A+  G T +    
Sbjct: 138 PNGGLHLGHLAGPYVRADVLVRALRSTGRDARHVTGTDDHQSHVAVSARLGGATPEQVAA 197

Query: 75  QNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIYKG------CYSGW 127
            +            +  D   R  T   H D  R L  ++++   + +       C +  
Sbjct: 198 SHGEAILATLRAAGVDCDRLTRPATAPGHADRIRELITRLAESPSVTEQERDTAYCAACD 257

Query: 128 YSLRDE---------AYYNDDEVYKGADGQYYNAQ----------HNPVQWMEEEGYFFR 168
            SL            A  +D E+ + A G+   A+            P     E   +  
Sbjct: 258 LSLHQAFARGACAHCAADSDGEICE-ACGRPNEAKDLVDPRCRLCGGPATTRPERALWLD 316

Query: 169 LSAYQDKLLSYY-ESH--PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
           +SA+ ++L  Y  +SH  P+ +  +ER       +  GL    L+R+  DWG+++ D  +
Sbjct: 317 MSAHAEQLARYLKDSHTSPDLLALVER------LLADGLPPYRLARRA-DWGVELADGQR 369

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-IGKDILRFHAIYWPAFLLSANL 284
             +  W+D    +L         DG      PA + + +G D   F+A+  PA   +A L
Sbjct: 370 --VDAWVDLALTFLDAARAETEQDG------PAKITLFLGYDNSFFYAVLLPAVAFAAGL 421

Query: 285 P--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
              LP    ++ F+     K S S G+ I     + E G DA+R  L+R    G+     
Sbjct: 422 AEHLPAAFVTNQFLHLDDAKFSTSRGHAIWADPALAEAGPDAVRLALLRNAPEGR----- 476

Query: 343 KDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTES 386
              + +   A LA    +L ++  ++      DG++P  GA+T++
Sbjct: 477 VTRITQERAALLAQDPLHLAAKEWLAGFAGVGDGVVPGTGAWTDA 521


>gi|300173956|ref|YP_003773122.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888335|emb|CBL92303.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 894

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 155/358 (43%), Gaps = 54/358 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTF 214
           PV+      +F +++    + L   ++  E +  +  R E   +     ++D  +SR+ +
Sbjct: 363 PVESRLSTQWFVKMAPLAKQALDMQKNADEKVEFVPARFEDTFTRWMDNIRDWVISRQLW 422

Query: 215 DWGIKIP-----------------DDPQY--------IMYVWIDALTNYLTTTGYLDNPD 249
            WG +IP                 D+P+         ++  W  +     +T G+ DN  
Sbjct: 423 -WGHQIPAWYKNKGTDQEEIYVGTDEPEGEGWQRDPDVLDTWFSSALWPFSTMGWPDNKA 481

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEK 302
              AK++P +  V G DI+ F    W A ++      +   P  K V  HG I   +G K
Sbjct: 482 DDFAKYYPTNTLVTGYDIIFF----WVARMMFQGKEFTGQRPF-KNVLIHGLIRDGEGRK 536

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN +DP++VIE+ G DALR+FL      G+D  +  D +    N    N I N  
Sbjct: 537 MSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKMDAAWN--FINKIWN-A 593

Query: 363 SRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           SR V M L +     +P     + SD+ ILS  +  ++++  N        A  ++ + +
Sbjct: 594 SRYVIMNLDEKTPSTLPDLDKLSLSDKWILSRLNTTIEDVTRNFDRFEFGEAGRELYNFI 653

Query: 422 SE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                D Y +  K  E    + D+A    T+ YV  + +R    LLQ  +P +   I+
Sbjct: 654 WSDFADWYIEMTK--ETLNGDADKAPVQQTLAYVLDQTLR----LLQPIMPFVTESIW 705



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D++ R  ++ G+DVL+  G D           +AG+
Sbjct: 46  AIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMD-----------HAGI 94

Query: 68  TTKVFVDQNSR 78
            T+  V+Q  R
Sbjct: 95  ATQAKVEQRLR 105


>gi|295094145|emb|CBK83236.1| valyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 880

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 10/225 (4%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+P  + V G DI+ F  I   + A   +   P  K V  HG +   +G K+SKSLGN I
Sbjct: 476 FYPTSVLVTGYDIIFFWVIRMVFSALEQTGKSPF-KHVLIHGLVRDDQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN I N  +R + M ++
Sbjct: 535 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN--FANKIWN-ATRFIMMNME 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
             D         T +D  ILS  + + +E+ +NM+   +  A+++V   + E   D Y +
Sbjct: 592 KADFSDVKLSDLTIADRWILSKVNTLAKEMTDNMEKFELGIAVSKVYDFIWEEFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             KP  L     +  +  L+    V+ Q   LL  ++P +  +IF
Sbjct: 652 MVKP-RLYNDEDETKAAALWTLKTVLIQALKLLHPYMPFITEEIF 695



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          +R K   +  +  PN   Q H+GHA +  + D+L RF R+ G   L+  GTD      A 
Sbjct: 32 DRSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDH-----AA 86

Query: 61 AAQNAGVTTKV 71
           A    VT K+
Sbjct: 87 IATEVKVTEKL 97


>gi|150389212|ref|YP_001319261.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949074|gb|ABR47602.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 884

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVID 312
           F+P D+ V G DI+ F  +      L     +P K VF HG +    G K+SKSLGN ID
Sbjct: 477 FYPTDVLVTGYDIIFFWVVRMAFSGLEFMDEIPFKHVFIHGLVRDADGRKMSKSLGNGID 536

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+ +I++ G DALR+ LV   + G D  +  + L+   N   AN + N    +   +L +
Sbjct: 537 PLNIIDQYGADALRFTLVTGNSPGNDMRFHMEKLESSRN--FANKLWN----ATRFVLMN 590

Query: 373 YDGMIPTPGAFTE----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
            D    T     E    +D  I+S  ++V +E+ ENM    +  A  ++   + SE  D 
Sbjct: 591 LDEKEITEEEVKEHLNTADRWIISRVNQVTKEVTENMDKFELGMAAQKIYDFIWSEYCDW 650

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           Y +  K   L   N D+     Y    V+  +  LL  F+P +  +I+  L   D
Sbjct: 651 YIELTKT-RLYGENEDKRKAAQYTLTSVLADILKLLHPFMPFITEEIWQHLPTVD 704



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 14/111 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  +  PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD           +A +
Sbjct: 40  SIVLPPPNITGQLHMGHALDHTLQDILIRWKRMQGFETLWQPGTD-----------HASI 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            T+V V +  +    ++  LDI  D F++   +   +  R +  ++   GD
Sbjct: 89  ATEVKVVEKIKREEGLSK-LDIGRDGFLQRAWEWRDEHGRTIVNQMKRMGD 138


>gi|320528328|ref|ZP_08029490.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131242|gb|EFW23810.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 870

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 56/337 (16%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---------I 227
           ER  +  +     ++D  +SR+ + WG +IP               DP+          +
Sbjct: 387 ERFEKTFNGWLENIEDWCISRQLW-WGHRIPAWYNTVTGETYVGETDPEDTTNWVQDEDV 445

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLP 285
           +  W  +      T G+ +  +   A+++P +  V G DI+ F    + + A   + N P
Sbjct: 446 LDTWFSSALWPFATLGWPEETE-DLARYYPTNTMVTGYDIIFFWVARMAFQARHFTKNRP 504

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K V  HG +   +G K+SKSLGN IDP++VIEE G+DALR+FL      G+D  Y  +
Sbjct: 505 F-KDVLIHGLLRDAQGRKMSKSLGNGIDPMKVIEEYGIDALRFFLTTNSTPGQDMRYIPE 563

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVLQEI 401
             K     +  N I N  SR V M L   +GM       T    +D  I++  +  +  +
Sbjct: 564 --KVEAAGNFINKIWN-ASRFVFMNLP--EGMKVEDVDLTHLSLADAWIINRLNETITHV 618

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPD--------RASTVLYVT 451
            ENM+         ++ S V      +D    W  E+ KT  +         A + LYV 
Sbjct: 619 TENMEKYEFALVGNELYSFV------WDDFCSWYVEMSKTALNGTDEVAKRAAQSTLYVC 672

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           ++ I     LLQ F+P +  +I+D+L  A E+   +S
Sbjct: 673 LKAI---VGLLQPFMPFVTEEIYDLLPGAKESINLES 706



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 16/101 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA++  + D+++R+ R+ G D+LF  G D           +AG+ T+  VD  +R  
Sbjct: 52  HIGHAWDNTLQDIISRYKRMQGYDMLFLPGMD-----------HAGIATQAKVD--ARLK 98

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118
            +     D+  + F+      +  +  T R  W K+ +  D
Sbjct: 99  SEGISRYDLGREKFLERAWEWKAEYAKTIRTQWGKLGNSLD 139


>gi|193794492|gb|ACF21458.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794494|gb|ACF21459.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GRIPEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|255505616|ref|ZP_05347190.3| valine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266928|gb|EET60133.1| valine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 889

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 23/241 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 484 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKAPFHHVLIHGLVRDSQGRKMSKSLG 539

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN I N  SR 
Sbjct: 540 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFY-----WERVEASRNFANKIWN-ASRF 593

Query: 366 VSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           + M L+  +     P  + T++D+ ILS  + + +++ +NM+   +  A+ +V   + E 
Sbjct: 594 IMMNLEKAEIPEQMPKESLTQADKWILSKVNALAKDVTDNMEKFELGIAVQKVYDFIWEE 653

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  KP     T+  +A+  L+    V+     LL  ++P +  +I+  L   +E
Sbjct: 654 FCDWYIEMVKPRLYSDTDTTKAAA-LWTLKAVLGNALKLLHPYMPFITEEIYCTLNPQEE 712

Query: 483 N 483
           +
Sbjct: 713 S 713


>gi|323342873|ref|ZP_08083105.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463985|gb|EFY09179.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 861

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 157/346 (45%), Gaps = 52/346 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    D++L++ +   +     ER     +     ++D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADEVLAHQQGDDKINFYPERFENTFTRWLDNIEDWCISRQLW-WGHRIPAWF 418

Query: 222 -----------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                      + P+ I         +  W  +     +T G+ +N +  + +++P ++ 
Sbjct: 419 HKETEEIYVGLEAPEDIENWRQDEDVLDTWFSSALWPFSTLGWPENTEDLE-RYYPTNVL 477

Query: 262 VIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + A   + + P  + V  HG I  + G K+SKSLGN +DP++VIE
Sbjct: 478 VTGYDIIFFWVARMAFQARYFTNSRPF-EDVLIHGLIRDQDGRKMSKSLGNGVDPMDVIE 536

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             GVDALRYFL      G+D  Y  + ++   N    N I N  SR V M ++D D    
Sbjct: 537 TYGVDALRYFLTTNSTPGQDMRYMPEKVEASWN--FINKIWN-ASRFVLMHIED-DVYEI 592

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPW- 434
                ++ D  I+   ++ L+E+  NM      L+   L++ +         +D    W 
Sbjct: 593 DKAQLSQVDRHIIHKFNQTLEEVSRNMDKYEFALVGNTLSRFV---------WDDFCSWY 643

Query: 435 -ELKKTN-PDRASTVLYVT----VEVIRQLAILLQAFVPKLANKIF 474
            EL K+      + V+Y T      +++ + ILL  F+P +  +I+
Sbjct: 644 IELSKSGLQSDDAQVVYATKATLSHMLKNILILLHPFMPFVTEEIY 689



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R+ RL G D L+  G D           +AG+
Sbjct: 39 SLVIPPPNVTGKLHLGHAWDNTLQDIIIRYQRLLGKDALYLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V+Q  R
Sbjct: 88 ATQAKVEQKMR 98


>gi|291532689|emb|CBL05802.1| valyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 841

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 16/230 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFIL-HKGEKISKSL 307
           +F+P  + V G DI+ F    W A ++   L   K      VF HG +   +G K+SKSL
Sbjct: 433 QFYPTSVLVTGYDIIFF----WVARMVMMGLEFGKDIPFKHVFIHGLVRDSQGRKMSKSL 488

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN + N  SR + 
Sbjct: 489 GNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN--FANKLWN-ASRFML 545

Query: 368 MILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           M L+ +D   +P    +T +D+ ILS  ++    I EN++   +  A   +   +     
Sbjct: 546 MNLEGFDKTFVPEASDYTLADKWILSRYAKTAISITENLEKFELGEAGRSLYDFIWNEFC 605

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  K     K N        YV   V+     LL  F+P +  +I+
Sbjct: 606 DWYIELSKARLYDKENVRPRKVAQYVLGYVLEHTLRLLHPFMPFITEEIW 655



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 13/65 (20%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          PN   Q H+GHA +  + D+L RF R+ G + L+  GTD           +AG+ T+  V
Sbjct: 4  PNVTGQLHMGHAMDNTLQDILIRFRRMQGYNTLWMPGTD-----------HAGIATQAKV 52

Query: 74 DQNSR 78
          D   R
Sbjct: 53 DAQLR 57


>gi|187776915|ref|ZP_02993388.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC
           15579]
 gi|187775574|gb|EDU39376.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC
           15579]
          Length = 881

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 22/268 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVIEE G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIEEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++E+ EN++   +  A  ++   +     D Y +  KP  L   N +       V  +V+
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKP-VLYGENEEAKGIAFNVLHKVL 679

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483
                LL   +P +  +I+  L+   E+
Sbjct: 680 ETSLQLLHPIMPFITEEIYTHLYTEYES 707


>gi|194360507|gb|ACF57901.1| methionyl-tRNA synthetase [Actinomyces odontolyticus]
          Length = 166

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +     DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IPTPG   + D ++L         +   +++     AL
Sbjct: 61  VAGWGNLVNRTASMIAKKF-GEIPTPGELEDIDRALLDAVEAGFATVGNLIRHHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQL 458
           ++ + LV E ++Y    +P++LK     +R +TVL+   + +  L
Sbjct: 120 SEAMRLVGEANKYVTDTEPFKLKAPEQRERLATVLWTLAQAVADL 164


>gi|320538067|ref|ZP_08037966.1| valyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145076|gb|EFW36793.1| valyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 900

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 164/389 (42%), Gaps = 58/389 (14%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LR+   + ++E    A G+ Y   H  ++    E +F ++    +K LS ++       P
Sbjct: 340 LRELDLFKNEEKITHAVGECYRC-HTTIEPYLSEQWFVKMKPLAEKALSAWQKGEITFYP 398

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            +  N    ++++ ++D  +SR+ + WG +IP                            
Sbjct: 399 KKWENTYAHWMEN-IRDWCISRQLW-WGHRIPAWYCDDCKQMTVSREDLSACTHCGSKNI 456

Query: 222 -DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
             DP  ++  W  +     +T G+    +  KA F+P    V   DI+ F    W + ++
Sbjct: 457 HQDPD-VLDTWFSSWLWPFSTLGWPSKTEDLKA-FYPTTALVTAYDIIFF----WVSRMI 510

Query: 281 SANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A L        K ++ HG +   +G K+SKSLGN IDP+EV++  G DAL++ L    A
Sbjct: 511 MAGLEFTGEVPFKDIYIHGLVRDRQGRKMSKSLGNGIDPLEVVKSYGADALKFTLAFMCA 570

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESIL 391
            G+D   D +  K  + +  AN I N    +   IL + +G    P      TE D  I 
Sbjct: 571 QGQDVLVDMESFK--LGSRFANKIWN----ASRYILGNLEGREIRPVKKSELTELDRWIY 624

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV---SEVDRYFDAQKPWELKKTNPDRASTVL 448
              ++     R+ ++    + A AQV+      +  D Y +A K    K  + +  +   
Sbjct: 625 HALNKAADNSRKALEAYRFNEA-AQVLYEFFWNNFCDWYVEATK-LSFKTNDENEMNRAA 682

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V + V+ +   LL  F+P +  +I+  L
Sbjct: 683 SVLLAVLEESLRLLHPFLPFVTEEIYGRL 711



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 16/101 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH     + D++ R+HR+ G + L+  GTD           +AG+ T+  V++  +  
Sbjct: 59  HMGHGLNNTLQDIVVRYHRMKGDETLWVPGTD-----------HAGIATQNVVERQLK-- 105

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118
           ++     D++ ++F++ T   +  HH       KKI    D
Sbjct: 106 KEGRSRHDLTREEFLQRTWQVKDAHHAIIVNQLKKIGASAD 146


>gi|328950389|ref|YP_004367724.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450713|gb|AEB11614.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 867

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 61/355 (17%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++  +    +K+++  E      +P   R   + ++++ ++D ++SR+ + WG +IP   
Sbjct: 361 WWLSMKPLAEKVIAGIERGEIQFVPERWRKVNLDWLRN-IRDWNISRQLW-WGHQIPAWH 418

Query: 222 ----------------DDPQYIMY--------------VWIDALTNYLTTTGYLDNPDGS 251
                           +DPQ   +               W  +    L+T G+ +  +  
Sbjct: 419 CKACGEITVPPVERYMEDPQACAHCGSPEIERDPDVFDTWFSSALWPLSTLGWPEETEDL 478

Query: 252 KAKFWPADLHVIGKDILRFHAIYW------PAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304
           KA F+P D+ V G DIL      W        +      P  K V  HG +L  KG+K+S
Sbjct: 479 KA-FYPGDVLVTGYDIL----FLWVSRMEVSGYHFKGERPF-KTVLLHGLVLDEKGQKMS 532

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP+E++E  G DALR+ LV     G+D  +D+  ++  +  + AN + N    
Sbjct: 533 KSKGNVVDPLELVEAYGADALRFALVHLATGGQDIRFDRRWVE--MGRNFANKLWN---- 586

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE 423
           +   +L + +G        T +D  + +  ++ ++EI    +   +  A  +V  LV SE
Sbjct: 587 AARFVLMNREGFEAKRDELTLADRWMQARLAQGVREITALYERYDLALAAREVYQLVWSE 646

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +A KP  L++ N    +  L      +  L  LL   +P + ++I+  L
Sbjct: 647 FCDWYIEAAKP-ALREGN----AATLKGLENALETLLKLLHPLMPFVTSEIYAAL 696


>gi|330880735|gb|EGH14884.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 334

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 39/319 (12%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
           A  ++ AD+ ARF R  G DV+F  GTDEHG     AAQNA +  K + +      R + 
Sbjct: 2   AGSLLPADIYARFLRQQGHDVMFICGTDEHGTPAEIAAQNANMDVKSYCNHMYEVQRRIY 61

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141
               +S++ F R++  ++ +  +  + K+ D G I++   S +YS  +  +  D  +   
Sbjct: 62  ANFGLSFNFFGRSSCDQNVEITQEFFFKLQDAGYIFEDVISQYYSAVEGRFLPDRFINGQ 121

Query: 142 -----YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
                +  A G   +   A  NP + +  +         + +  S+     E  +P+ ++
Sbjct: 122 CPRCGFLSATGDQCDGCGALLNPEELINPKSSISGDEKLELRRTSHLFLDLEKTVPLLQK 181

Query: 194 -----------NEVIS--FVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTN 237
                        +IS      GLK   ++R    WGI +P     P+ + YVW DA   
Sbjct: 182 WHDSNRWGNLTRGIISKWMDNEGLKARCITRDN-KWGIPVPLLHLTPK-VFYVWFDAPYA 239

Query: 238 YLTTT-GYLDNPDGSKA---KFWPAD----LHVIGKDILRFHAIYWPAFLLSA--NLPLP 287
           Y+  T  Y D    ++    K+W +D       + KD + FHAI+WPA LL++  N+ L 
Sbjct: 240 YIAITKAYGDTLGDAETILKKWWYSDSVEYTQFMAKDNVPFHAIFWPAQLLASRDNVKLV 299

Query: 288 KKVFSHGFILHKGEKISKS 306
             +    ++ + G K S S
Sbjct: 300 DDIKGFNWLTYDGGKFSTS 318


>gi|229107186|ref|ZP_04237171.1| Methionine--tRNA ligase [Bacillus cereus Rock3-28]
 gi|228676257|gb|EEL31117.1| Methionine--tRNA ligase [Bacillus cereus Rock3-28]
          Length = 671

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 214/541 (39%), Gaps = 62/541 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K  I+     PN   H+GH +     AD+L R+ +L G +V + +G D+H   +   A
Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPFKA 182

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120
                + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +  
Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242

Query: 121 --------KGCYSGWYSLRDEAYYND-----DEVYKGADGQYYNAQH------NPV---- 157
                   K C    Y    EAY        DE+  G   +     +      NP     
Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCC 298

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210
               +  + +  FF LS Y+ +L  YY+     P      ER       +   L D+ +S
Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261
             + DWGI +P +      +YVW +    YL+ T  L    N   +   FW       ++
Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWKNKDTTIIN 411

Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
             G D   FH++ +PA  L  S ++ LPK + ++ F   +G K S S G+ +   E++E 
Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDINLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D +RY+L        +  +  +     V+ +L     + +      +  ++    P 
Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLEAEFPNGAPE 531

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437
               + +        +R++ EI    + N    + + ++++ +  + + F A + +  + 
Sbjct: 532 LETLSGNYLMYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492
           K N  R +T + + +   + LAI     +P     +     F++    DE   F    Q+
Sbjct: 592 KNNQQRRNTAIALELYTAKILAIFSSPIMPTFGKMLWGDLGFNVEMQLDEEVSFLPAGQK 651

Query: 493 L 493
           +
Sbjct: 652 V 652


>gi|330718899|ref|ZP_08313499.1| valyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 873

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 43/283 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKT 213
           PV+      +F +++   +++L+  +   E +  +P ER  +  +     ++D  +SR+ 
Sbjct: 342 PVESRLSTQWFVKMAPLAEQILAMQQKPDEKVNFVP-ERFEDTFTHWMENIRDWVISRQL 400

Query: 214 FDWGIKIP------DDPQYIMYV-------------------WIDALTNYLTTTGYLDNP 248
           + WG +IP      +  Q  +YV                   W  +     +T G+ +  
Sbjct: 401 W-WGHQIPAWYKNKNTDQEEIYVGQEAPEGEGWERDEDVLDTWFSSALWPFSTMGWPEKT 459

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGE 301
           DG  A+++P +  V G DI+ F    W A ++      +   P  K V  HG I   +G 
Sbjct: 460 DGDFARYYPTNTLVTGYDIIFF----WVARMMFQGKEFTGERPF-KNVLIHGLIRDGEGR 514

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGN +DP++VIE+ G DALR+FL      G+D  +  + +    N    N I N 
Sbjct: 515 KMSKSLGNGVDPMDVIEKYGADALRWFLATGSTPGQDTRFTYEKMDASWN--FINKIWNA 572

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
               +  + +D    +P     T +D+ ILS  +  +  +  N
Sbjct: 573 SRYVIMNLAEDTPTKLPDFDKLTLADKWILSRLNTTIANVTRN 615



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 15/88 (17%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 24 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWVPGMD-----------HAGI 72

Query: 68 TTKVFVDQNSRNFRDMADVLDISYDDFI 95
           T+  V+Q  R  +D     D+  + F+
Sbjct: 73 ATQAKVEQRLR--QDGVTRYDLGREKFV 98


>gi|297566936|ref|YP_003685908.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851385|gb|ADH64400.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 872

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 155/367 (42%), Gaps = 62/367 (16%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P++ M    +F R+     K+L   E      +P ER  +V       ++D ++ R+ +
Sbjct: 356 EPIEPMLLTQWFVRMKPVAQKVLEGLERGEMRFVP-ERWEKVNRDWLENIRDWAIGRQLW 414

Query: 215 DWGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTT 242
            WG +IP                       DP+Y          +   W  +     +T 
Sbjct: 415 -WGHQIPAWYDEEGNIYVPDPENPDLDCDQDPRYAHLRLRRDEDVFDTWFSSALWPFSTL 473

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298
           G+ D+ +  K KF+P D+ V G DI+     +W A +  +      +   H  +LH    
Sbjct: 474 GWPDDTEDLK-KFYPTDVLVTGYDII----FFWVARMQMSGYQFTGQAPFHTIVLHGLYL 528

Query: 299 --KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             KG+K+SKS GN IDP+E+I+  G DA R+        G+D  +D    ++  N   AN
Sbjct: 529 DEKGQKMSKSKGNGIDPLELIDRYGADACRFAWDYLATGGQDIRHDPRRYEQGRN--FAN 586

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRENMQNQLIHR 412
            + N    +   +L + D +  T  A     T +D  + S  SR + EI E  +   + R
Sbjct: 587 KLWN----AARFVLMNKDAIRQTQDAKREDLTLADRWMTSRLSRGIAEITEAYEAYDLGR 642

Query: 413 ALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A   +  LV SE  D Y +A KP  L++ N    +  L+     +  L  LL   +P + 
Sbjct: 643 AARLIYDLVWSEFCDWYLEAAKP-ALREGN----TATLHTLEHTLAALLKLLHPIMPFIT 697

Query: 471 NKIFDIL 477
           ++++  L
Sbjct: 698 SELYQAL 704



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA +  I D L RF R+ G + L+  GTD           +AG+TT+V V++ 
Sbjct: 56  HLGHALDNTIIDTLIRFKRMQGYEALYLPGTD-----------HAGITTQVLVERE 100


>gi|168183482|ref|ZP_02618146.1| valine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796619|ref|YP_002864171.1| valyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673388|gb|EDT85349.1| valine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262502|gb|ACQ53535.1| valine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 881

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 22/268 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ A L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFAGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++E+ EN++   +  A  ++   +     D Y +  KP  L   N +       V  +V+
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKP-VLYGENEEAKGIAFNVLHKVL 679

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483
                LL   +P +  +I+  L+   E+
Sbjct: 680 ETSLQLLHPIMPFITEEIYTHLYTEYES 707


>gi|294155780|ref|YP_003560164.1| valine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600430|gb|ADE19926.1| valine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 830

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 157/357 (43%), Gaps = 53/357 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + P++ +    +F ++  +   +L +  +  +      R  +++    S + D +
Sbjct: 342 YSERSNTPIEILVLPQWFVKMETFAKDILQHLRTKDKVKFYPPRFIKILKNWMSNIHDWT 401

Query: 209 LSRKTFDWGIKIP-------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           +SR+ + WG +IP                      + ++  W  +  +     G+    +
Sbjct: 402 ISRQIW-WGHRIPVWYKGDQIKVQTTSPGLDWKQDEDVLDTWFSSGLSPFVFLGWPQKNE 460

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKI 303
             K +++P  L V G D++ F    W A +    L + K+     V  HG I   +G K+
Sbjct: 461 MIK-RYYPTSLLVTGSDLIFF----WIARMYMFGLDVMKQKPFENVLIHGLIRDEQGRKM 515

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL N IDPI+VI+E G DAL++FL+     G D  Y  D +K      L N + N +S
Sbjct: 516 SKSLNNGIDPIDVIDEYGADALKWFLITNTTPGFDIKYSPDKIKSAWG--LCNKLWN-IS 572

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R ++ +  D +  I      T++D+ I +  S +++ I ++M+N       +Q+   +  
Sbjct: 573 RFINELPNDNNNKI------TDADKWINNKLSLLIKSINKSMKNYEFTLVGSQISKFI-- 624

Query: 424 VDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++    W  E  K NP +   +L     +++   I++  F+  +  KIF  +F
Sbjct: 625 ----YNDLSGWYVEFLKVNPSKKQALL-----ILKNTLIVVNPFLSFVTYKIFKDIF 672



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 14/104 (13%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   + H+GHA++ +I D + R+ +L G D  + +G D           +AG+ T+  +
Sbjct: 42  PNVTGKLHLGHAFDTLIPDTIIRYKKLKGFDTFWISGMD-----------HAGIATQSKI 90

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +++  N + +    DI  ++F++ T +   D   +  ++ S  G
Sbjct: 91  EEHLWNTKKLTK-HDIGREEFLKLTWQWKEDYANLFREQWSRLG 133


>gi|193794444|gb|ACF21434.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPTTQARLATVLHTLAQAVTDL 166


>gi|266625215|ref|ZP_06118150.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862886|gb|EFC95184.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 464

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 16/228 (7%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +     +  LP    V  HG +   +G K+SKSLGN I
Sbjct: 64  FYPTDVLVTGYDIIFFWVIRMVFSGIEHTGQLPF-NTVLMHGLVRDSEGRKMSKSLGNGI 122

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  SR + M
Sbjct: 123 DPLEVIDKYGADALRMTLITGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRFIMM 176

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            ++            T +D+ ILS  + + +++ +N+    +  AL +V   + E   D 
Sbjct: 177 NIEKAPDSRAELSDLTMADKWILSKANSLARDVTDNLDKFELGIALQKVYDFIWEEFCDW 236

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  KP    + +  +A+ +  +   +I  L  LL  ++P L  +IF
Sbjct: 237 YIEMVKPRLWNEEDTTKAAAIWTLKTVLINSLK-LLHPYMPFLTEEIF 283


>gi|255527795|ref|ZP_05394646.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508508|gb|EET84897.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 68

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 45/61 (73%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          ++  YI+T I YP+A+ HIG+ Y  I AD LARF RL G DV+F TGTDEHGQKI K ++
Sbjct: 3  KKPYYITTPIYYPSAKLHIGNTYTTIAADALARFKRLTGYDVMFLTGTDEHGQKITKISR 62

Query: 64 N 64
          +
Sbjct: 63 S 63


>gi|226325482|ref|ZP_03801000.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758]
 gi|225206225|gb|EEG88579.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758]
          Length = 731

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 15/256 (5%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +     +T G+ +  +  K  F+P D+ V G DI+ F  I   +  +  +   P  
Sbjct: 299 TWFSSALWPFSTLGWPEETEDFKY-FYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPF- 356

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
             V  HG +   +G K+SKSLGN IDP+EVI+E G DALR  L+   A G D  FY++  
Sbjct: 357 HTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDEYGADALRLTLITGNAPGNDMRFYNERV 416

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              R   + AN + N  SR + M ++D     P    F  +D+ ILS  + + +++ ENM
Sbjct: 417 ESSR---NFANKVWN-ASRFIMMNMEDKVISKPDEADFEVTDKWILSKVNTLAKDVTENM 472

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAIL 461
               +  A+ +V   + +   D Y +  K + +  +  N   A+  L+    V+     +
Sbjct: 473 DKFELGIAVQKVYDFIWDEFCDWYIELVK-YRIYHSDENYKSANAALWTLKTVLGNALKM 531

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 532 LHPFMPFVTEEIYSAL 547


>gi|239618105|ref|YP_002941427.1| valyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506936|gb|ACR80423.1| valyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 867

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 160/392 (40%), Gaps = 55/392 (14%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ Y    E    A G+ Y   H  V+    + ++ ++    ++     E       P
Sbjct: 324 LEEQGYLEKIESMTHAVGKCYRC-HTVVEPSLSDQWYVKIGPLAERAKKAVEDGEVVFFP 382

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP----------- 224
            ER  +V     + ++D  +SR+ + WG +IP              DDP           
Sbjct: 383 -ERWKKVYLNWMNEIRDWCISRQLW-WGHRIPVWYCNDCGEIIVEEDDPTSCPKCGSKSL 440

Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +     TT G+    +  K  F+P  + V G DI+ F    W A ++ 
Sbjct: 441 RQDEDVLDTWFSSQLWPFTTLGWPGETEDLKT-FYPTSVLVTGFDIIFF----WVARMIM 495

Query: 282 ANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A      +     V+ H  +  K G K+SKSLGN IDP++VIEE G D +R+ L    A 
Sbjct: 496 AGYHFTGEKPFSDVYIHQLVRDKHGRKMSKSLGNGIDPLDVIEEYGADPMRFTLSMLAAQ 555

Query: 336 GKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           G+D   D    D  K+      AN I N  SR   M L +Y  +  T       D  ILS
Sbjct: 556 GRDIKLDPRFFDTYKR-----FANKIWN-ASRFAIMNLDNYVPIELTEETLELEDRWILS 609

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
              R ++++ + M+N   + A   + S       D Y +  KP    + N         V
Sbjct: 610 RLQRTIEQVTDAMENYDFNIAAKAIYSFFWNEFCDWYIETVKP--RLRENGMTKHVAQNV 667

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            V+V+ Q   LL  F+P +  +++  L V  E
Sbjct: 668 LVKVLDQSLRLLHPFMPFITEELWQKLPVGGE 699


>gi|326201136|ref|ZP_08191008.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988704|gb|EGD49528.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 883

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 18/267 (6%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G K  +  Q  +  W  +     +T G+ D  +  +  F+P D+ V G DI+ F    W 
Sbjct: 441 GSKRIEQDQDTLDTWFSSALWPFSTLGWPDKTEDLEY-FYPTDVLVTGYDIIFF----WV 495

Query: 277 AFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++ + +   K+     VF HG +   +G K+SKSLGN IDP+EVI + G DALR+ L 
Sbjct: 496 ARMIFSGMEHMKQEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGTDALRFALT 555

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDES 389
              + G D  Y  + ++   N   AN + N  SR V M   +D D        F+ +D+ 
Sbjct: 556 IGNSPGNDLRYSPEKVEAARN--FANKVWN-ASRFVLMNFDEDLDFSKVDKKKFSIADKW 612

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           I+S  + V +E+ EN++   +   L +V   + E   D Y +  KP    + +  R    
Sbjct: 613 IMSRINTVTKEVTENIEKFELGLGLQKVYDFIWEEFCDWYIEMVKPKLYDRESEGRLE-A 671

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
            YV   V+     LL  ++P +  +I+
Sbjct: 672 QYVLNFVLGNAMKLLHPYMPFVTEEIY 698



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 24/142 (16%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++ K   +  I  PN   Q H+GHA +  + D+L R  R+ G   L+  GTD        
Sbjct: 35  DKNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRTKRMQGYSALWLPGTDHASIATEA 94

Query: 57  KIAKAAQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
           KI  A    G++                 K++  +     + +    D   + F  T ++
Sbjct: 95  KIVDALAKDGISKDMLGREKFLEKAWEWRKIYGGRIVEQLKKLGSSCDWERERF--TMDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKG 122
                 + ++ K+ DKG IYKG
Sbjct: 153 GLSKAVQEVFLKLYDKGLIYKG 174


>gi|193794360|gb|ACF21392.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMHLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|83589396|ref|YP_429405.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83572310|gb|ABC18862.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 880

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 54/314 (17%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP+               ++  W  + 
Sbjct: 399 IRDWCISRQLW-WGHRIPVWYCQQCGEEICSREDPEECPACGSTALEQDPDVLDTWFSSA 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKV 290
               +T G+ D     +A F+P  + V G+DI+ F    W A +L   L     +P ++V
Sbjct: 458 LWPFSTLGWPDRTPELEA-FYPTSVLVTGRDIIFF----WVARMLFMGLEFMGEVPFREV 512

Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             HG +L  +G K+SKSLGN +DP+EVIE+ G D LR  LV     G D  +  + L+  
Sbjct: 513 LIHGLVLDAQGRKMSKSLGNGVDPMEVIEKYGADTLRLMLVTGNTPGNDLRFHPERLEGT 572

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   AN I N  +R   M L+DY+         T +D  ILS  ++++ E+   ++   
Sbjct: 573 RN--FANKIWN-AARFALMNLEDYEPAPLERENLTLADRWILSRLNKLVLEVNACLEAYE 629

Query: 410 IHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           I     +V  ++ E       D Y +  KP  L   N         V V V+ +   LL 
Sbjct: 630 I----GEVARMLYEFFWGEFCDWYIELIKP-RLYGENRRERQVAQEVLVTVLGKSLQLLH 684

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 685 PFMPFITEEIWQHL 698



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 22/141 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           H+GHA +  + D+L R+HR+ G   L+  GTD  G     ++ +     G++        
Sbjct: 53  HLGHALDNTLQDILTRWHRMRGDATLWIPGTDHAGIATQARVEEELAKEGLSKYDLGRDR 112

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                      + D+ +R  R +    D S + F  T ++      R ++ ++ +KG IY
Sbjct: 113 FLERVWEWKHQYGDRITRQLRLLGSSCDWSRERF--TMDEGCSRAVREVFVRLYEKGLIY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G Y   +  R     +D EV
Sbjct: 171 RGSYIINWCPRCRTTISDIEV 191


>gi|229118537|ref|ZP_04247890.1| Methionine--tRNA ligase [Bacillus cereus Rock1-3]
 gi|228664918|gb|EEL20407.1| Methionine--tRNA ligase [Bacillus cereus Rock1-3]
          Length = 671

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 110/541 (20%), Positives = 215/541 (39%), Gaps = 62/541 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K  I+     PN   H+GH +     AD+L R+ +L G +VL+ +G D+H   +   A
Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVLYMSGADDHQSYVPFKA 182

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120
                + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +  
Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242

Query: 121 --------KGCYSGWYSLRDEAYYND-----DEVYKGADGQYYNAQH------NPV---- 157
                   K C    Y    EAY        DE+  G   +     +      NP     
Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCC 298

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210
               +  + +  FF LS Y+ +L  YY+     P      ER       +   L D+ +S
Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261
             + DWGI +P +      +YVW +    YL+ T  L    N   +   FW       ++
Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWNNQDTTIIN 411

Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
             G D   FH++ +PA  L  S ++ LPK + ++ F   +G K S S G+ +   E++E 
Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDINLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D +RY+L        +  +  +     V+ +L     + +      +  ++    P 
Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLEAEFANGAPE 531

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437
               + +        +R++ EI    + N    + + ++++ +  + + F A + +  + 
Sbjct: 532 LETLSGNYLMYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492
           K N  R +T + + +   + LA+     +P     +     F++    DE   F    Q+
Sbjct: 592 KNNQQRRNTAIALELYTAKILALFSSPIMPTFGKMLWGDLGFNVDMQLDEEVSFLPAGQK 651

Query: 493 L 493
           +
Sbjct: 652 V 652


>gi|171680540|ref|XP_001905215.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939897|emb|CAP65123.1| unnamed protein product [Podospora anserina S mat+]
          Length = 663

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 120/536 (22%), Positives = 218/536 (40%), Gaps = 62/536 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ AD  AR+ R  G + L+  GTDE+G      A
Sbjct: 73  KRNILITSALPYINNVPHLGNIIGSVLSADTFARYSRARGFNSLYIGGTDEYGTTTEARA 132

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+       +     IS+D F RTT     +  + ++ K+ D G + + 
Sbjct: 133 LVENCTLQELCDKYYAIHAAVYKWFSISFDIFGRTTTPLQTEITQDIFLKLKDNGFLEER 192

Query: 123 CYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN-------------------------P 156
             +  Y  +   +  D  V  +  D  Y +A+ +                         P
Sbjct: 193 MTTQLYCEQHHLFLADRFVEGECPDCGYVDARGDQCDLCGKLLESLELIRPRCKVDGSVP 252

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V   E +  F  L   Q ++ +++ ES  +        +   +++K GL+  S++R    
Sbjct: 253 VT-KETKHIFLELDKLQPEVEAFFQESAAKGAWSSNGTSITAAWLKEGLQPRSITRD-LK 310

Query: 216 WGIKIPDD----PQYIMYVWIDAL-TNYLTTTGYLDNPDGSKAKFW--PADLHV---IGK 265
           WG  +P       + ++Y W DA     L  + Y D  +    K+W  P D+ +   +GK
Sbjct: 311 WGTPVPTSLEGYEEKVIYSWFDAWQVEILFHSNYTDQWE----KWWRSPDDVQLYQFMGK 366

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGV 322
           D + +H+I +PA  +  + P  K   + +  ++ ++G K SKS G  V        EV  
Sbjct: 367 DNVVYHSIIFPATKIGTHEPWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSARETEVPS 426

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPG 381
           D  R++L+       D  +  DG     N  L   +GN VSR V  I  + ++ ++P   
Sbjct: 427 DIWRFYLLYCRPETGDSEFTWDGFISANNNLLLKNLGNFVSRVVKFINSRHFNNVVPDWT 486

Query: 382 AFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKT 439
            + E S ++  +  +++L +  + +    +   L   + +    + +  A K    L +T
Sbjct: 487 QYGEPSFDAFKADINQLLAQYIQELDGVKLRAGLLTALQISQRGNGFLQASKLDNSLYET 546

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            P + + V            IL    +P L     D +    E    Q L  R+KP
Sbjct: 547 QPAKCAAV------------ILRANALPILEEWTADSIRPGHEISLSQHLFSRIKP 590


>gi|222099723|ref|YP_002534291.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572113|gb|ACM22925.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 868

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 30/269 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +     +T G+ +  +  K +++P DL V G DI+ F    W A ++      
Sbjct: 450 VLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGFDIIFF----WVARMIMMGYEF 504

Query: 286 LPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           + +K FSH +I H+      G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D 
Sbjct: 505 MNEKPFSHVYI-HQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDI 563

Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
             D    D  KK      AN I N  +R V M L+DY   +P     T  D+ IL+  ++
Sbjct: 564 KLDPRYFDAYKK-----FANKIWN-ATRFVLMNLEDYKE-VPLENLKT-VDKWILTRLNK 615

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++E+   ++N   + A   + +   +   D Y +A KP  LK        T+L  T++ 
Sbjct: 616 TVKEVTSALENYDFNIAARTIYNFFWDEFCDWYIEASKP-RLKTEERHLVQTLLVKTLDT 674

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
             +   LL  F+P L  +++  L V  E+
Sbjct: 675 SLR---LLHPFMPFLTEELWQKLPVDGES 700



 Score = 44.7 bits (104), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----- 62
           S  I  PN   + H+GHA  + + D++ R+ R+ G DVL+  G D  G     A      
Sbjct: 40  SIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLL 99

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107
           Q  G T            T  + ++  R  R+    L  S  D+ R   T ++      R
Sbjct: 100 QTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASV-DWTRERFTLDEGLSRAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++ ++  KG IY+G Y   +  R +   +D+EV
Sbjct: 159 KVFVELYKKGLIYRGKYIVNWCPRCKTVLSDEEV 192


>gi|193794326|gb|ACF21375.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794448|gb|ACF21436.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELQDIDRTLLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|193794422|gb|ACF21423.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPKPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|193794304|gb|ACF21364.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794322|gb|ACF21373.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794328|gb|ACF21376.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794338|gb|ACF21381.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794340|gb|ACF21382.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794342|gb|ACF21383.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794356|gb|ACF21390.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794364|gb|ACF21394.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794378|gb|ACF21401.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794380|gb|ACF21402.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794392|gb|ACF21408.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794408|gb|ACF21416.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794434|gb|ACF21429.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794440|gb|ACF21432.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794454|gb|ACF21439.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPQPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|193794362|gb|ACF21393.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794370|gb|ACF21397.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794402|gb|ACF21413.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794420|gb|ACF21422.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794514|gb|ACF21469.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794530|gb|ACF21477.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|153812839|ref|ZP_01965507.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174]
 gi|149831051|gb|EDM86140.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174]
          Length = 895

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 17/239 (7%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + A   +  +P    V  HG +   +G K+SKSLGN I
Sbjct: 488 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGEVPF-HHVLIHGLVRDSQGRKMSKSLGNGI 546

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN I N  SR + M L+
Sbjct: 547 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKIWN-ASRFIMMNLE 603

Query: 372 DYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                +  P    E    D+ ILS  + V++E+ +NM    +  A+ +V   + +   D 
Sbjct: 604 --GKTVTEPADLNELCLEDKWILSKLNTVIREVTDNMDKYELGIAVQKVYDFLWDELCDW 661

Query: 427 YFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y +  K   W+ ++ +P  A+  L+     + +   LL  ++P +  +I+  L   +E+
Sbjct: 662 YIEMAKVRLWKAEE-DPKAANNALWTLRTALTEGLKLLHPYMPFITEEIYCTLLPEEES 719



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 15/83 (18%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L RF R+ G + L+  GTD           +A + T+V V
Sbjct: 57  PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 105

Query: 74  DQNSRNFRDMADVLDISYDDFIR 96
               +  ++  D LDI  ++F++
Sbjct: 106 IDKLK--KEGIDKLDIGREEFLK 126


>gi|290890940|ref|ZP_06554004.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
 gi|290479339|gb|EFD87999.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
          Length = 902

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 120/273 (43%), Gaps = 18/273 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280
           DP  ++  W  +     +T G+ D  +    +F+P    V G DI+ F    + + A   
Sbjct: 462 DPD-VLDTWFSSALWPFSTLGWPDTNNSDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEF 520

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  K V  HG I   KG K+SKSLGN IDP++VI + G DALR+FL      G+D 
Sbjct: 521 TGTRPF-KNVLIHGLIRDSKGRKMSKSLGNGIDPMDVINKYGTDALRWFLSTGSTPGQDL 579

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVL 398
            +  D +    N    N I N VSR V M L+ D    +P       +D+ ILS  +  +
Sbjct: 580 NFSNDKMDSAWN--FINKIWN-VSRYVLMNLETDTKIELPDRNLLALADKWILSRLNSTI 636

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLYVTVE 453
           + + +N        A  Q+ + + +   D Y +  K    +  N D A     V  V   
Sbjct: 637 ENVTKNFDKFEFGEAGRQLYNFIWDDFADWYIEMTK----ETLNDDSALNKRPVQQVLAY 692

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           V+ Q   LL   +P +   I+  L    +N+  
Sbjct: 693 VLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQSL 725



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 51  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGLDHAGIATQAKVEARLR 110

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVD+               +  M   LD S + F  T +K  ++  R
Sbjct: 111 EDGISRYDLGREKFVDKVLQWKDEYASIIKEQWAKMGLSLDFSRERF--TLDKGLNEAVR 168

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 169 KVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 216


>gi|193794306|gb|ACF21365.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794308|gb|ACF21366.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794314|gb|ACF21369.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794318|gb|ACF21371.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794330|gb|ACF21377.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794346|gb|ACF21385.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794368|gb|ACF21396.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794374|gb|ACF21399.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794382|gb|ACF21403.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794410|gb|ACF21417.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794464|gb|ACF21444.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794472|gb|ACF21448.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794478|gb|ACF21451.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794482|gb|ACF21453.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794484|gb|ACF21454.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794486|gb|ACF21455.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794488|gb|ACF21456.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794490|gb|ACF21457.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|167766367|ref|ZP_02438420.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|317496795|ref|ZP_07955125.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711958|gb|EDS22537.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|291559231|emb|CBL38031.1| valyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316895807|gb|EFV17959.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 879

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 173/408 (42%), Gaps = 81/408 (19%)

Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--H 183
           NDD       G+Y     Y A+   V  +EE+GY  ++  ++      D+  +  E    
Sbjct: 300 NDDATINKNGGKYEGMDRYEARKAIVADLEEQGYLVKIKEHEHNVGTHDRCGTTVEPMIK 359

Query: 184 PEFILPIER-RNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221
           P++ + +E      I  VK+G                   ++D  +SR+ + WG +IP  
Sbjct: 360 PQWFVKMEELAKPAIEAVKNGDLKFVPERYTKTYLHWLENIRDWCISRQLW-WGHRIPAY 418

Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKA-- 253
                       + P+                +  W  +     +T G+   P+ +K   
Sbjct: 419 YCDECGEVVVARETPEVCPKCGCKHFTQDEDTLDTWFSSALWPFSTLGW---PEKTKELD 475

Query: 254 KFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
            F+P +  V G DI+ F  +   +  +  +   P    V  HG +   +G K+SKSLGN 
Sbjct: 476 YFYPTNTLVTGYDIIFFWVVRMVFSGYEQTGKSPF-DTVLIHGLVRDEQGRKMSKSLGNG 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           I+P++VI + G DALR+ L+   A G D  Y     +KRV A  + AN I N  SR + M
Sbjct: 535 INPLDVIAQYGADALRFTLITGNAPGNDMRY----TEKRVIASRNFANKIWN-ASRFIMM 589

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L+  D    T    T +D+ ILS  + + +++ +NM+   +  A+ ++   + E   D 
Sbjct: 590 NLEQADFSDVTLEDLTSADKWILSKLNTLAKDVTDNMEKYELGIAVQKLNDFLWEEFCDW 649

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  KP  L        +  L+    V+ +   LL  ++P +  +I+
Sbjct: 650 YIEMVKP-RLYNDEDQTKAAALWTLNTVLTEALKLLHPYMPFITEEIY 696


>gi|329121233|ref|ZP_08249860.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327470167|gb|EGF15630.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 906

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 19/268 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           KI  DP  ++  W  +     +T G+ +  +  K +++P    V G DI+ F    W A 
Sbjct: 466 KINQDPD-VLDTWFSSALWPFSTMGWPEKTETLK-QWYPTSTMVTGYDIIFF----WVAR 519

Query: 279 LLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++  ++     +P K VF HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  
Sbjct: 520 MMFMSMEFMHEIPFKYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTG 579

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESIL 391
              G D  +  + ++   N + AN + N  ++   M L +YD   IP    +  +D+ IL
Sbjct: 580 NTPGNDMRFYYERVEG--NRNFANKLWN-ATKFTLMNLDNYDKNFIPEEKDYALADKWIL 636

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++  + +  N+    +  A   + +       D Y +  K     +   DR  T  Y
Sbjct: 637 EKLAKTEEFVSRNLDKYELGEAADSIYNFAWNCFCDWYIETAKSRLYAEHCRDRQVT-QY 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V V  + ++  LL  F+P +   ++  L
Sbjct: 696 VLVYTLTRMLALLHPFMPFITEHLWQHL 723



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 25/164 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  +  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D  G     K+ K   
Sbjct: 64  SIVLPPPNVTGQLHMGHALDGTLQDILIRYKRMQGYNVMWLPGKDHAGIATQVKVEKQIA 123

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T                 + + +   +  R +    D + + F  T +       R
Sbjct: 124 KEGLTKYDLGREKFLERVWQWKEKYGNTIGKQIRKLGSSCDWTRERF--TMDDVCAKAVR 181

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
            ++  + +KG IY+G     +  R +   +D EV ++  DG+ Y
Sbjct: 182 EVFITLYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLY 225


>gi|193794320|gb|ACF21372.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794424|gb|ACF21424.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794430|gb|ACF21427.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRTLLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|268609037|ref|ZP_06142764.1| valyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 872

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 10/252 (3%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288
            W  +     +T G+ +N +  K  F+P +  V G DI+ F  I      L     +P  
Sbjct: 451 TWFSSALWPFSTLGWPENTEDLKY-FYPTNTLVTGYDIIFFWVIRMMFSGLENMGKVPFD 509

Query: 289 KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V  HG +   +G K+SKSLGN IDP+EVI E G DALR+ L    + G D  Y  D +K
Sbjct: 510 TVLIHGLVRDAQGRKMSKSLGNGIDPLEVINEYGADALRFMLATGNSPGNDMRYIDDKVK 569

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              N   AN + N  SR + M L +       P      D+ +++  +++ +E+ EN+  
Sbjct: 570 AARN--FANKLWN-ASRFIMMNLPEDFEFKGLPSDLELEDKWLVNKFNQLAKEVNENLDK 626

Query: 408 QLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  A  ++   + +V  D Y +  KP    +   +  +    V V  ++ +  LL  F
Sbjct: 627 YELGVASQKIYDFIWDVYCDWYIELTKP--RIQAGGETMAKAQAVLVWAMQGMLKLLHPF 684

Query: 466 VPKLANKIFDIL 477
           +P +  +I+ +L
Sbjct: 685 MPFITEEIWQVL 696



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        KI +A +
Sbjct: 40  TIVIPPPNITGQLHMGHALDETLQDILIRWKRMSGYSALWLPGTDHAAIATEAKIVEAMR 99

Query: 64  NAGVT 68
             GVT
Sbjct: 100 KEGVT 104


>gi|323147776|gb|ADX33167.1| MetG [Vibrio vulnificus]
 gi|323147784|gb|ADX33171.1| MetG [Vibrio vulnificus]
 gi|323147786|gb|ADX33172.1| MetG [Vibrio vulnificus]
 gi|323147788|gb|ADX33173.1| MetG [Vibrio vulnificus]
 gi|323147790|gb|ADX33174.1| MetG [Vibrio vulnificus]
 gi|323147794|gb|ADX33176.1| MetG [Vibrio vulnificus]
 gi|323147798|gb|ADX33178.1| MetG [Vibrio vulnificus]
 gi|323147802|gb|ADX33180.1| MetG [Vibrio vulnificus]
 gi|323147806|gb|ADX33182.1| MetG [Vibrio vulnificus]
 gi|323147810|gb|ADX33184.1| MetG [Vibrio vulnificus]
 gi|323147818|gb|ADX33188.1| MetG [Vibrio vulnificus]
 gi|323147824|gb|ADX33191.1| MetG [Vibrio vulnificus]
 gi|323147826|gb|ADX33192.1| MetG [Vibrio vulnificus]
          Length = 143

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 7/137 (5%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259
           L+   +SR    +G +IP +     YVW+DA   Y+ +   L +   D    ++W  D  
Sbjct: 1   LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSK 60

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FH+++WPA L  +    P  VF HG++   G K+SKS G  +     
Sbjct: 61  TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120

Query: 317 IEEVGVDALRYFLVREI 333
           +E +  + LRY+   ++
Sbjct: 121 LEHLDPECLRYYYAAKL 137


>gi|259047289|ref|ZP_05737690.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036065|gb|EEW37320.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 880

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 20/200 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P +  V G DIL F
Sbjct: 431 GMEAPSDSENWTQDPDVLDTWFSSALWPFSTMGWPDEDAADYKRYYPTNTLVTGYDILTF 490

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L        K V  HG I   +G K+SKSLGN +DP+EVIE+ G DA
Sbjct: 491 ----WVSRMMFQGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIEQYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FL    A G+D  Y  D +    N    N I N  SR   M + D     +   G  
Sbjct: 547 LRWFLANGSAPGQDVRYSTDKMDAAWN--FINKIWN-ASRYALMNVGDLTADQVDITGEK 603

Query: 384 TESDESILSVCSRVLQEIRE 403
           T +D+ IL+  ++ + ++ E
Sbjct: 604 TLADKWILTRLNQTIGKVTE 623



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA+++ + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLR 99

Query: 64  NAGVT-----TKVFVDQN-------SRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++      + F++Q        + + R+    + IS  D+ R   T +    D  + 
Sbjct: 100 GEGLSRYDLGREKFLEQTWKWKEEYASHIREQWAKMGISV-DYRRERFTLDNGLSDAVKK 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           ++  + +KG IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 159 VFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIHKDVEGAFYHMNY 205


>gi|313892624|ref|ZP_07826211.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119021|gb|EFR42226.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 883

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 19/268 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           KI  DP  ++  W  +     +T G+ +  +  K +++P    V G DI+ F    W A 
Sbjct: 443 KINQDPD-VLDTWFSSALWPFSTMGWPEKTETLK-QWYPTSTMVTGYDIIFF----WVAR 496

Query: 279 LLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++  ++     +P K VF HG +   +G K+SKSLGN IDP+EVIE+ G DALR+ LV  
Sbjct: 497 MMFMSMEFMHEIPFKYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESIL 391
              G D  +  + ++   N + AN + N  ++   M L +YD    P    +T +D+ IL
Sbjct: 557 NTPGNDMRFYYERVEG--NRNFANKLWN-ATKFTLMNLDNYDKNFTPEEKDYTLADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++  + +  N+    +  A   + +       D Y +  K     +   DR  T  Y
Sbjct: 614 EKLAKTEEFVSRNLDKYELGEAADSIYNFAWNCFCDWYIETAKSRLYAEHCRDRQVT-QY 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V V  + ++  LL  F+P +   ++  L
Sbjct: 673 VLVYTLTRMLALLHPFMPFITEHLWQHL 700



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 25/164 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  +  PN   Q H+GHA +  + D+L R+ R+ G +V++  G D  G     K+ K   
Sbjct: 41  SIVLPPPNVTGQLHMGHALDGTLQDILIRYKRMQGYNVMWLPGKDHAGIATQVKVEKQIA 100

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T                 + + +   +  R +    D + + F  T +       R
Sbjct: 101 KEGLTKYDLGREKFLERVWQWKEKYGNTIGKQIRKLGSSCDWTRERF--TMDDVCAKAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
            ++  + +KG IY+G     +  R +   +D EV ++  DG+ Y
Sbjct: 159 EVFIALYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLY 202


>gi|87123441|ref|ZP_01079292.1| valyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86169161|gb|EAQ70417.1| valyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 914

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 27/279 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +       +++P    V G DI+ F    +   A   +  +
Sbjct: 461 VLDTWFSSGLWPFSTLGWPETGSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  K V+ HG +   +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D
Sbjct: 521 PF-KDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLD 579

Query: 343 KD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D         + A    N +  +    L +  G  P       P A   +D  ILS  +
Sbjct: 580 YDRKTDTSATVEAARNFANKLWNATRFALMNLGGETPASLGEPEPAALQLADRWILSRLA 639

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-------- 445
           RV +E  E   +  +  A   +         D Y +  K    ++ NP  A         
Sbjct: 640 RVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGEAPSPEALADQ 695

Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            T   V V+VI Q+ ++L   +P L  +++  +  A E 
Sbjct: 696 RTARQVLVKVISQMHLMLHPLMPHLTEELWHSVTGAGET 734



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 39 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGRNVLCLPGTD 83


>gi|169334634|ref|ZP_02861827.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259351|gb|EDS73317.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
          Length = 882

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 24/260 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----- 284
            W  +     +T G+    +  K KF+P D+ V G DI+ F    W A ++ + +     
Sbjct: 455 TWFSSALWPFSTLGWPKETEDLK-KFYPNDVLVTGFDIIFF----WVARMVFSGIEQMGE 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V+ HG +   +G K+SKSLGN IDP+EVI++ G D LR+ LV     G D  + +
Sbjct: 510 PPFHHVYIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADVLRFSLVTGNKAGNDTRWQE 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQ 399
              K   N + AN I N  +R + M L+D+D      +P       +D+ I+S  +++++
Sbjct: 570 S--KVEANRNFANKINN-AARFILMNLEDFDENKKADLP---KLHNTDKWIISRTNQMVK 623

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+  N++      A  ++ + +     D Y +  KP  L   N +      Y    V   
Sbjct: 624 EVTANIEKYEFGIAAEKLYTFIWNEFCDLYIEFAKP-SLNSDNKEDRFNTQYTLNLVFMN 682

Query: 458 LAILLQAFVPKLANKIFDIL 477
           +  +L  ++P +   I+  +
Sbjct: 683 ILKMLHPYMPFITEHIYSFM 702


>gi|210621752|ref|ZP_03292801.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275]
 gi|210154634|gb|EEA85640.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275]
          Length = 887

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 27/270 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +N +     ++P ++ V G DI+ F  +       +A   +
Sbjct: 450 VLDTWFSSALWPFSTLGWPNNTEELNY-YYPTNVLVTGYDIIFFWVV---RMAFAAMFCM 505

Query: 287 PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GF 340
            +K FSH  I       +G K+SKSLGN IDP+E+I++ G DALR+ L+   + G D  F
Sbjct: 506 NEKPFSHVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQFGADALRFTLITGNSPGNDMRF 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-------PTPGAFTESDESILSV 393
           Y      +RV  + A    N +  +   +  ++D  +             T +D+ I+S 
Sbjct: 566 Y-----MERV--EFARNFANKLWNASRFVFMNWDEEMMNGVTRSDVEANLTLADKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + +++++  NM    +  AL +      SE  D Y +  KP  L   + +     LY  
Sbjct: 619 ANNIVKDVTHNMDKFELGMALQKAYDFTWSEYCDWYIEMVKP-RLYGDDVEAKKAALYTL 677

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             V+  +  LL  F+P +  +IFD L  A+
Sbjct: 678 TYVLETILKLLHPFIPFITEEIFDHLPTAN 707


>gi|260589301|ref|ZP_05855214.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540382|gb|EEX20951.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 881

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 21/240 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 477 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKTPFHHVLIHGLVRDSQGRKMSKSLG 532

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M
Sbjct: 533 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERIEASRN--FANKVWN-ASRFIMM 589

Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            L+  D  IP        T +D+ ILS  + + +E+ EN+    +  A+ +V   + E  
Sbjct: 590 NLEKAD--IPKNIDLQTLTGADKWILSKVNTLAKEVTENLDKYELGIAVQKVYDFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  KP  L        +  L+    V+     LL  ++P +  +I+  L   +E+
Sbjct: 648 CDWYIEMVKP-RLYNDEDTTKAAALWTLKTVLSNALKLLHPYMPFITEEIYCTLCPEEES 706



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 4  REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          R+K   +  +  PN   Q H+GHA +  + D+L RF R+ G + L+  GTD
Sbjct: 34 RDKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD 84


>gi|37522488|ref|NP_925865.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708049|sp|Q7NCQ9|SYV_GLOVI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|35213489|dbj|BAC90860.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 897

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 27/288 (9%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
            +++R+ +   +++  D Q ++  W  +     TT G+ D  +     F+P  L   G D
Sbjct: 437 FAVARERYGPDVQLQRD-QDVLDTWFSSSLWPFTTLGWPDQTE-DLGVFYPNALMSTGFD 494

Query: 267 ILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
           I+     +W A +       +  +P  + V+ +G +   KG+K+SK+ GN IDPIE++++
Sbjct: 495 II----FFWVARMAMMAGEFTGQIPF-ETVYINGLVRDEKGQKMSKTKGNGIDPIEMMDK 549

Query: 320 VGVDALRYFLVREI-ACGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMI 377
            G DALRY LVRE+   G+D  +D +       A D +    N +  +   +L + D + 
Sbjct: 550 YGTDALRYTLVREVTGAGQDVRFDYNRKTGESGAVDASKRFANKIWNASRFVLMNLDELT 609

Query: 378 PT------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           P       PG+ T  D  IL    +  ++I E +    +  A   +   + +   D Y +
Sbjct: 610 PAALGAADPGSLTLEDRWILGRLGQTARQIDELLGRYALGEAARSLYEFIWDDFCDWYVE 669

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             KP  L+     R +    V   V+ +   LL  ++P L+ +I+ +L
Sbjct: 670 LAKP-RLEALETRRGAQ--QVLAAVLDRTLRLLHPWMPHLSEEIWQLL 714


>gi|160947447|ref|ZP_02094614.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270]
 gi|158446581|gb|EDP23576.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270]
          Length = 875

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 11/253 (4%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP-AFLLSANLPLPK 288
            W  +     +T G+ D  +  K  F+P +  V G DIL F  I    + L + N    +
Sbjct: 447 TWFSSALWPFSTLGWPDKTEDLKY-FFPTNTLVTGYDILFFWVIRMVFSSLYNLNEVPFR 505

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGL 346
            V+  G I  + G K+SKSLGN IDPIE+I++ G DALR+ LV     G D  FY+K   
Sbjct: 506 NVYFTGLIRDELGRKMSKSLGNGIDPIEIIDKYGADALRFTLVGGNTPGNDMRFYEK--- 562

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +   N + AN + N  SR V M L D +            D+ IL+  +R ++E+ EN+ 
Sbjct: 563 RVESNRNFANKLWN-ASRFVLMNLNDEEIYDIDLNKIEIEDKWILTRLNRTIEELTENLS 621

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 A +++   +     D Y +  K   L   N  +   V  V V V+  +  LL  
Sbjct: 622 KFEFGLASSKIYDFIWNEFCDWYIEFSKT-RLYGDNLGKKIVVKSVLVYVLNNILKLLHP 680

Query: 465 FVPKLANKIFDIL 477
           F+P +  +I+  +
Sbjct: 681 FMPFITEEIYSFM 693



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78
           H+GHA    I D+L R+ R+ G + L+  GTD      A  +  A V  K+  D NS+
Sbjct: 52  HLGHALNNTIQDILIRWKRMSGYEALWVPGTDH-----ASISTEAKVVEKIKKDGNSK 104


>gi|260437219|ref|ZP_05791035.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810532|gb|EFF69737.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 877

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 160/399 (40%), Gaps = 73/399 (18%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE---------FILP 189
           DE  K A    Y A+   V  +E EG   ++  +   + + Y  H           F+  
Sbjct: 305 DEYEKYAGLDRYEARKAIVADLEAEGALVKIEPHDHNVGTCYRCHTTVEPRVSKQWFVKM 364

Query: 190 IERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP--------- 221
            E     I  VKSG                   +KD  +SR+ + WG +IP         
Sbjct: 365 EELAGPAIEAVKSGKTRFVPEHFDKTYYHWLENIKDWCISRQLW-WGHRIPAFYCDCCNE 423

Query: 222 -------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADL 260
                               DP   +  W  +     +T G+   PD ++    F+P   
Sbjct: 424 VVVTKENKAVCPKCGKEMRQDPD-TLDTWFSSALWPFSTLGW---PDKTEELDYFYPTST 479

Query: 261 HVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
            V G DI+ F  I   +     +   P    +  HG +   +G K+SKSLGN IDP+EVI
Sbjct: 480 LVTGYDIIFFWVIRMMFSGIEHTGKAPF-NTILIHGLVRDSQGRKMSKSLGNGIDPLEVI 538

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           ++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M L   +   
Sbjct: 539 DKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFIMMNLDKAEVRD 595

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
                 T++D+ ILS  + + +++ +NM+N  +  A+ ++   + E   D Y +  KP  
Sbjct: 596 VDVTELTDADKWILSKVNTLAKDVTDNMENYDLGVAVQKIYDFIWEEFCDWYIEMVKP-R 654

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           L   +    +  LY    V+     LL  ++P +  +IF
Sbjct: 655 LWNDDDTTKAAALYTLKTVLINSLKLLHPYMPFITEEIF 693



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          +R K   +  +  PN   Q H+GHA +  + D+L RF R+ G   L+  GTD      A 
Sbjct: 32 DRSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRFKRMQGYSALWVPGTDH-----AS 86

Query: 61 AAQNAGVTTKV 71
           A  A V  K+
Sbjct: 87 IATEAKVVEKI 97


>gi|293401447|ref|ZP_06645590.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305085|gb|EFE46331.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 874

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 46/307 (14%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY---------IMYVWIDALTNY 238
             ++D  +SR+ + WG +IP              +DPQ          ++  W  +    
Sbjct: 398 ENIEDWCISRQLW-WGHRIPAWYHKETNEIYVGMEDPQDQENWKQDEDVLDTWFSSALWP 456

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFS 292
            +T G+ +N D   A+++P DL V G DI+ F    W A +         N P  K V  
Sbjct: 457 FSTLGWPENTD-DLARYFPNDLLVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLI 510

Query: 293 HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           HG +   +G K+SKSLGN IDP++VI+  GVDALR+FL      G+D  Y  + ++   N
Sbjct: 511 HGLVRDPQGRKMSKSLGNGIDPMDVIDHFGVDALRFFLTTNSTPGQDLRYSDEKVEASWN 570

Query: 352 ADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
               N I N  SR   M L D   +  I    A +  D+ IL   + VL  + ENM+   
Sbjct: 571 --FINKIWN-ASRFALMQLGDAFHLEDIDVSNA-SMIDKWILKRFNEVLGNVTENMEKYE 626

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                 ++ + V +     Y +  K   L+  +    +      V V+R +  +L  F+P
Sbjct: 627 FALVGNELYNFVWDDFCSWYIELSKA-GLQSADATVVTAARSTLVIVLRGIVRMLHPFMP 685

Query: 468 KLANKIF 474
            ++ +I+
Sbjct: 686 FVSEEIY 692



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA++  + D++AR+ RL G D+L+  G D           +AG+ T+  VD+
Sbjct: 52 HLGHAWDTTLQDIVARYKRLQGYDMLWLPGMD-----------HAGIATQAKVDE 95


>gi|269866487|ref|XP_002652290.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220062801|gb|EED41766.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 315

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 45/313 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y   QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVINQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D     
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129

Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158
                          I   C  G  +  D+      Y+ D +  +  + +    +  P Q
Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
               +  FF L    ++L  Y+++          R    +++K  L    ++RK    WG
Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242

Query: 218 IKIP----DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKF-WPAD---LHVIGKDIL 268
           + +P    DD   + YVW DA   YL+     L++  G+   F W      +  +GKD +
Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKWVLFMGKDNV 300

Query: 269 RFHAIYWPAFLLS 281
            FH+I +P  L +
Sbjct: 301 PFHSIIFPCILYA 313


>gi|193794412|gb|ACF21418.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GRIPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|269468704|gb|EEZ80333.1| methionyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 133

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 1/99 (1%)

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L+ A+      +F+HGF+   G+K+SKS G  I     +E +
Sbjct: 29  HFIGKDIVYFHALFWPAMLMGADYRTRNAIFAHGFVTVNGQKMSKSRGTFIQARTYLESL 88

Query: 321 GVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGI 358
             + LRY+   +++   D    + +  K+RVN+DL   +
Sbjct: 89  NPECLRYYYAYKLSAKIDDIDLNLEDFKQRVNSDLVGKV 127


>gi|209528060|ref|ZP_03276539.1| methionyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491516|gb|EDZ91892.1| methionyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 83

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          K ++   ++T + Y N  PHIG AY  I AD +AR+ RL G +VL  TGTDEHGQKI + 
Sbjct: 6  KTKKTFSLTTPLYYVNDVPHIGSAYTTIAADAIARWKRLQGYEVLLITGTDEHGQKIQRT 65

Query: 62 AQNAGVTTKVFVDQ 75
          A+ AG + +V  D+
Sbjct: 66 AEEAGCSPQVHCDR 79


>gi|302338655|ref|YP_003803861.1| valyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635840|gb|ADK81267.1| valyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 881

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 65/420 (15%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +L+ E  Y  D+ +    G  Y        +M E+ +F R+ +  DK L+ +E       
Sbjct: 327 ALKAEGVYIGDKEHLHQVGHCYRCDTVIEPYMSEQ-WFVRMKSLADKALAAWEKDEVRFY 385

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY-------- 226
           P +  N   S++K+ ++D  +SR+ + WG +IP              +DP          
Sbjct: 386 PKKWENTYTSWLKN-IRDWCISRQLW-WGHRIPVWYCNDCGQMMVCREDPSTCSACGSSS 443

Query: 227 ------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
                 ++  W  +     +T G+ +  +  K +F+P    V G DI+     +W A ++
Sbjct: 444 LRQDPDVLDTWFSSWLWPFSTLGWPEKSEDLK-RFFPTSSLVTGYDII----FFWVARMI 498

Query: 281 SANLP----LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            ++L     +P + ++  G +  K G K+SKSLGN +DP+E+++E G DA+++ L    A
Sbjct: 499 MSSLEFLGEVPFRDIYITGLVRDKQGRKMSKSLGNGMDPLEIVDEFGADAMKFTLAFLAA 558

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D    KD  K    +  AN I N  +R + M L+  + + P        D  I    
Sbjct: 559 QGQDILLAKDDFK--FGSKFANKIWN-ATRFLLMNLEGRELLDPESVERKPLDRWIFHRL 615

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK--PWELKKTNPDRASTVLYV 450
           +     + + M++   + A   V         D Y +A K   +       +RA T+L  
Sbjct: 616 NEASAAVAKAMESYRFNDAANAVYEFFWSDFCDWYIEASKLSLYSDDDDEKNRAVTLLMQ 675

Query: 451 TVEVIRQLAILLQAFVP-----KLANKIFDILFVA---------DEN--RCFQSLDQRLK 494
            +E   +LA    +F+      KL     D++  A         DE   RCF +L + ++
Sbjct: 676 VLEESMRLAHPFLSFITEEIYQKLPGTKGDVITAAYPVWRESRRDEKTARCFSALQELIR 735


>gi|193794390|gb|ACF21407.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G +P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQVPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|291549332|emb|CBL25594.1| valyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 881

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 18/244 (7%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +  +   P    V  HG +   +G K+SKSLGN I
Sbjct: 476 FYPTDVLVTGYDIIFFWVIRMVFSGYEHTGKAPF-NTVLIHGLVRDSQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+E+I++ G DALR  L+   A G D  FY+     +RV A  + AN + N  SR + M
Sbjct: 535 DPLEIIDKYGADALRLTLITGNAPGNDMRFYN-----ERVEASRNFANKVWN-ASRFILM 588

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            ++      P       +D  ILS  + + +E+ ENM    +  A+ +V   + +   D 
Sbjct: 589 NMEKNVVEEPEDFLLKPADRWILSKVNSLTKEMTENMDKFELGIAVQKVHDFIWDEFCDW 648

Query: 427 YFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y +  K + +     D   A+  L+V   V+ Q   LL  F+P +  +I+  L   +E+ 
Sbjct: 649 YVEIAK-YRIYHAEEDSQSANCALWVLKTVLGQALKLLHPFMPFITEEIYGALVPEEESL 707

Query: 485 CFQS 488
              S
Sbjct: 708 MMSS 711



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R K   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD
Sbjct: 33 DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTD 84


>gi|325290585|ref|YP_004266766.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965986|gb|ADY56765.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 892

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 21/272 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G  +  DP  ++  W  +     +T G+  + +  K KF+P  + V G+DI+     +W 
Sbjct: 454 GKNLEQDPD-VLDTWFSSALWPFSTMGWPKDAEDLK-KFYPTSVLVTGRDII----FFWV 507

Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   +    +V  H  ++H      +G K+SKSLGN +DP+EVI+  G D LR+ L+
Sbjct: 508 ARMIFMGMEFMGEVPFHQVMIHGLILDAQGRKMSKSLGNGVDPLEVIDRYGADTLRFTLI 567

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDES 389
                G D  +  + L+   N    N I N  SR V M L+D+     TPG   T +D+ 
Sbjct: 568 TGNTPGNDLRFHSEKLEASRN--FVNKIWN-ASRFVLMNLEDFAA---TPGGELTLADKW 621

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS     ++ +   +    +  A   +   +     D Y +  K     + N +   T 
Sbjct: 622 ILSRYDGTVKAVTTALDRFDLGEAARLLYEFIWNEFCDWYIELSKRRLYDRENSEGRHTA 681

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             +  EV+     LL  F+P L  +I+  L V
Sbjct: 682 QRILREVLEGTMRLLHPFMPFLTEEIWQHLNV 713



 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 22/124 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTKVFVDQN 76
           H+GHA +  + D+LAR+ R+ G D L+  GTD  G     K+ +     G + +    + 
Sbjct: 67  HLGHAMDSTLQDILARYKRMQGYDTLWLPGTDHAGIATQAKVEEKLAEEGTSRQELGREK 126

Query: 77  ----------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                           ++  R +    D S + F  T +    +  R ++ K+ ++G IY
Sbjct: 127 FLERVWQWKEQYGGKITQQLRRLGASCDWSRERF--TMDAGCSEAVREVFVKLYEQGLIY 184

Query: 121 KGCY 124
           +G Y
Sbjct: 185 RGNY 188


>gi|254478609|ref|ZP_05091982.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214035463|gb|EEB76164.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 879

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 47/323 (14%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP------------ 224
           ER  ++ +     +KD  +SR+ + WG +IP              +DP            
Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCEDCGHVTVSREDPVKCEACGSTNIH 444

Query: 225 --QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
             + ++  W  +     +T G+ +  +  K  F+P D+ V G DI+ F    W A ++  
Sbjct: 445 QDENVLDTWFSSALWPFSTMGWPEETEDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499

Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L   K+     V  HG +    G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G
Sbjct: 500 SLEFMKEIPFKYVLIHGLVRDALGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  +  + ++   N   AN + N  SR V + L + D  +      T +D+ IL+  + 
Sbjct: 560 NDMRFSWEKVEHSRN--FANKLWN-ASRYVLLNLDENDTNLYIDN-LTLADKWILTRYNN 615

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++E+ +N++   +  A +++   V SE  D Y +  KP  L   N +       V   V
Sbjct: 616 IVKEVTDNLEKFELGVAASKLYDFVWSEFCDWYIELSKP-VLYSDNEEAKKVTKSVLRYV 674

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F+P +  +I+  L
Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697


>gi|116754239|ref|YP_843357.1| isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121692931|sp|A0B7P3|SYI_METTP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116665690|gb|ABK14717.1| Isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 1049

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 22/290 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +  VW D+      T  +  + +  +  +WPAD    G D  R  F++    
Sbjct: 516 RVPD----VFDVWFDSAVASWATLNFPRDEEEFRV-WWPADFITEGHDQTRGWFYSQLGA 570

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +     P  K V  HGF L  +G K+SKS+GNV+ P +V+E  G D LR++++   A 
Sbjct: 571 SMVAFGRAPY-KSVLMHGFTLDEQGRKMSKSIGNVVHPEDVVERYGADTLRFYVLSSNAP 629

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF--TESDESILS 392
            +D  +  +G    VN  + N + N     +  M+L  +D        +     D  I+S
Sbjct: 630 WEDLHFSWEGAMN-VNR-MLNILWNAYRFPLPYMVLDRFDISKADTSKYDLRPEDRWIIS 687

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVL 448
             + + +EI ENM   ++HRA   +   V E + R++      + W ++  +PD+ +   
Sbjct: 688 RVNSLAKEIEENMSGYMLHRATRSLQEFVLEDLSRWYIQLVRPRTW-IETEDPDKLAA-- 744

Query: 449 YVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           Y T+  V+  L  L+  F P LA  I+  L    +    +S+     PG+
Sbjct: 745 YATLYNVMSTLVKLMAPFTPFLAESIYQNLVRGLDPSAPESVHMCDWPGY 794


>gi|229100082|ref|ZP_04230989.1| Methionine--tRNA ligase [Bacillus cereus Rock3-29]
 gi|228683331|gb|EEL37302.1| Methionine--tRNA ligase [Bacillus cereus Rock3-29]
          Length = 671

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 109/541 (20%), Positives = 214/541 (39%), Gaps = 62/541 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K  I+     PN   H+GH +     AD+L R+ +L G +V + +G D+H   +   A
Sbjct: 123 KKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPFKA 182

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIY- 120
                + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +  
Sbjct: 183 GQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKLVE 242

Query: 121 --------KGCYSGWYSLRDEAYYND-----DEVYKGADGQYYNAQH------NPV---- 157
                   K C    Y    EAY        DE+  G   +     +      NP     
Sbjct: 243 KEVDILFCKQCDKHLY----EAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCC 298

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLS 210
               +  + +  FF LS Y+ +L  YY+     P      ER       +   L D+ +S
Sbjct: 299 GSEPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCER------MLDEDLPDIPIS 352

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LH 261
             + DWGI +P +      +YVW +    YL+ T  L    N   +   FW       ++
Sbjct: 353 HVS-DWGIPVPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWNNQDTTIIN 411

Query: 262 VIGKDILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
             G D   FH++ +PA  L  S ++ LPK + ++ F   +G K S S G+ +   E++E 
Sbjct: 412 FFGYDNGYFHSVLFPAIWLAYSEDITLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLEN 471

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D +RY+L        +  +  +     V+ +L     + +      +  ++    P 
Sbjct: 472 ASHDVVRYYLSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLKAEFPNGAPE 531

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW-ELK 437
               + +        +R++ EI    + N    + + ++++ +  + + F A + +  + 
Sbjct: 532 LETLSGNYLMYYQHVNRIVNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVL 591

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQR 492
           K N  R +T + + +   + LA+     +P     +     F++    DE   F    Q+
Sbjct: 592 KNNQQRRNTAIALELYTAKILALFSSPIMPTFGKMLWGDLGFNVDMQLDEEVSFLPAGQK 651

Query: 493 L 493
           +
Sbjct: 652 V 652


>gi|227874318|ref|ZP_03992503.1| valine--tRNA ligase [Oribacterium sinus F0268]
 gi|227839806|gb|EEJ50251.1| valine--tRNA ligase [Oribacterium sinus F0268]
          Length = 900

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 37/281 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLP 287
            W  +      T G+ +  +  K  F+P D+ V G DI+ F  +   +     +   P  
Sbjct: 452 TWFSSALWPFETLGWPEETEDYKY-FYPTDVLVTGYDIIFFWVVRMVFSGIEQTGKTPF- 509

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDG 345
           KKV  HG +   +G K+SKSLGN IDP+E+I   G DALR  L+   A G D  FY    
Sbjct: 510 KKVLIHGLVRDDQGRKMSKSLGNGIDPLEIIGTYGADALRMTLLTGNAPGNDMRFY---- 565

Query: 346 LKKRVNA--DLANGIGNLVSRSVSMILKDYDG-----------------MIPTPGAFTES 386
              RV A  +  N + N  SR + M +K+ +                  +   P     +
Sbjct: 566 -HSRVEASRNFMNKVWN-ASRFLFMNVKEEEKEALLSLVGKKEASLEEVLSVIPKNLALA 623

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D+ ILS C+  + E+  N+++  +  AL ++ + + E   D Y +  KP  L     +  
Sbjct: 624 DQWILSKCNHTVSEVTRNLESFDLGIALDKIQNFIWEEFCDWYIEMVKP-RLYSEGGESK 682

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDI---LFVADE 482
           +  L+  ++V++    LL  F P +  +I+D    LF  +E
Sbjct: 683 TLALWTLLKVLKTSLSLLHPFCPFITEEIYDTEKSLFPGEE 723


>gi|167745430|ref|ZP_02417557.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662]
 gi|167655151|gb|EDR99280.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662]
          Length = 879

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 171/407 (42%), Gaps = 79/407 (19%)

Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--H 183
           NDD       G+Y     Y A+   V+ +EE+GY  ++  ++      D+  +  E    
Sbjct: 299 NDDATINENGGRYEGMERYEARKAIVKDLEEQGYLVKIKEHEHNVGTHDRCKATIEPMVK 358

Query: 184 PEFILPI-ERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221
           P++ + + E     I  VK+G                   ++D  +SR+ + WG +IP  
Sbjct: 359 PQWFVKMDELAKPAIEAVKNGDIKFVPERYTKTYLHWLENIRDWCISRQLW-WGHRIPAY 417

Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                       + P+                +  W  +     +T G+ +  +     F
Sbjct: 418 YCDECGETVVAKEKPEVCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEQTE-ELDYF 476

Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +P ++ V G DI+ F  +   +  +  +   P    V  HG +   KG K+SKSLGN ID
Sbjct: 477 YPTNVLVTGYDIIFFWVVRMVFSGYEHTGKAPF-DTVLIHGLVRDDKGRKMSKSLGNGID 535

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369
           P+EVI + G DALR+ LV   A G D  FY      +RV A  + AN + N  SR + M 
Sbjct: 536 PLEVISQYGADALRFTLVTGNAPGNDMRFY-----MERVEASRNFANKVWN-ASRFMMMN 589

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            +  D         T +D  ILS  + + +++ +NM    +  A+ ++   + E   D Y
Sbjct: 590 FEQADFSHVELSDLTSADRWILSKFNTLAKDVTDNMDKYELGIAVQKLNDFIWEEFCDWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  KP  L     +  +  L+   +V+ +   LL  F+P +  +I+
Sbjct: 650 IEMVKP-RLYNDEDNTKAAALWTLKKVLSESLKLLHPFMPFITEEIY 695


>gi|194360509|gb|ACF57902.1| methionyl-tRNA synthetase [Actinomyces israelii]
          Length = 168

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGRKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ +MI K + G +P PG     D ++L         +   +       AL
Sbjct: 61  VAGWGNLVNRTATMIHKRF-GAVPAPGGLEPIDAALLDSIEAGFDAVGGLIARHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
           A+ + LV E ++Y    +P++LK  +P   +R +T+L+   + +  L
Sbjct: 120 AEAMRLVGEANKYIADTEPFKLKGQDPATQERLATILHTLAQAVADL 166


>gi|224369188|ref|YP_002603352.1| ValS [Desulfobacterium autotrophicum HRM2]
 gi|223691905|gb|ACN15188.1| ValS [Desulfobacterium autotrophicum HRM2]
          Length = 886

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 17/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N D  K  F+P +  V G DIL F    W A ++   +  
Sbjct: 450 VLDTWFSSALWPFSTMGWPENTDLLKT-FYPTNALVTGFDILFF----WVARMMMMGIHF 504

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P K V+ H  +  + G+K+SKS GNVIDP++VI+  G DA R+ L    A G+D  
Sbjct: 505 MGEVPFKDVYIHALVRDEHGKKMSKSKGNVIDPLKVIDTYGADAFRFTLAAFAAQGRDVK 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             ++ ++   +    N + N  SR   M + +    IP     +  +  I+   +   + 
Sbjct: 565 MSEERVEGYRH--FVNKLWN-ASRFALMHVDEQSKTIPLEN-LSPMESWIMERSTATARA 620

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++E ++    + A + +   V     D + +A+KP   +K   DR +T   V   V++  
Sbjct: 621 VKEGIEEYRFNEAASAIYQFVWHEFCDWFLEAEKPALYEKEGLDRRNTARAVLARVLQDT 680

Query: 459 AILLQAFVPKLANKIFDIL 477
            ++L  F+P +  +I+ +L
Sbjct: 681 VVMLHPFMPFVTEEIWHML 699



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 13/74 (17%)

Query: 5  EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          EK   S  I  PN     H+GHA  + + D++ RF RL G +VL+  GTD          
Sbjct: 36 EKRPYSIVIPPPNVTGVLHMGHALNITVQDIMCRFRRLMGDNVLWMPGTD---------- 85

Query: 63 QNAGVTTKVFVDQN 76
           +AG+ T+  V++N
Sbjct: 86 -HAGIATQNVVERN 98


>gi|220928627|ref|YP_002505536.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998955|gb|ACL75556.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 883

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP   +  W  +     +T G+ +  +  +  F+P D+ V G DI+ F    W A 
Sbjct: 444 RIEQDPD-TLDTWFSSALWPFSTLGWPEKTEDLEY-FYPTDVLVTGYDIIFF----WVAR 497

Query: 279 LLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ + +   K+     VF HG +   +G K+SKSLGN IDP+EVI + G DALR+ L   
Sbjct: 498 MIFSGVEHMKQEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGTDALRFALTIG 557

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESIL 391
            + G D  +  + ++   N   AN + N  SR V M   ++ D        F+ +D+ I+
Sbjct: 558 NSPGNDLRFSPEKVESARN--FANKVWN-ASRFVLMNFDENLDFSKVDKKKFSIADKWIM 614

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + V +E+ EN++   +   L +V   + E   D Y +  KP    + +  R     Y
Sbjct: 615 SRINTVTKEVSENIEKFELGLGLQKVYDFIWEEFCDWYIEMVKPKLYDRESEGRLEA-QY 673

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V   V+R    LL  ++P +  +I+
Sbjct: 674 VLNFVLRNAMKLLHPYMPFVTEEIY 698



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 24/142 (16%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++ K   +  I  PN   Q H+GHA +  + D+L R  R+ G   L+  GTD        
Sbjct: 35  DKNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRTKRMQGYSALWLPGTDHASIATEA 94

Query: 57  KIAKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
           KI  A    G++                 KV+  +     + +    D   + F  T ++
Sbjct: 95  KIVDAMAKEGISKDMLGREKFLEKAWEWKKVYGGRIVEQLKKLGSSCDWERERF--TMDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKG 122
                 + ++ K+ DKG IYKG
Sbjct: 153 GLSRAVQEVFLKLYDKGLIYKG 174


>gi|327295849|ref|XP_003232619.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464930|gb|EGD90383.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 973

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 39/280 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+   H+GH     I+DVLARF+++ G DVL   G D  G     AA 
Sbjct: 74  KEKTYVLPMFPYPSGTLHMGHVRVYTISDVLARFNQMKGYDVLHPMGWDAFGLPAENAAI 133

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + + +QN  N R+    L I +  D  ++T     +   + L+  + +KG  Y+
Sbjct: 134 ERGIHPEGWTNQNITNMRNQLKDLGIRFDWDTEVKTCSPEFYKHTQKLFLMLHEKGLAYQ 193

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V          A+   V+  E + +FFR++A+++ LL    
Sbjct: 194 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 250

Query: 178 SYYESHPEFILPIER------RNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMY 229
           S   S P+ IL ++R      R  ++ F       LS+  +T D  +    PD    + Y
Sbjct: 251 SLSGSWPDRILTMQRHWLGKSRGALVPFT------LSIPGETLDIEVFTTRPDTLHGVQY 304

Query: 230 VWIDA--------------LTNYLTTTGYLDNPDGSKAKF 255
           + +                L  ++ +TG L  P  +KA F
Sbjct: 305 IALSTSHPVVKKMAANTPELQKFINSTGSL--PPETKAGF 342



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351
           EK+SKS  N +DP   I+  G DA R  ++      +   +D+    G+++      +  
Sbjct: 672 EKMSKSKYNGVDPNTCIKSYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 731

Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            D  N +      S    L   +GM +P  G  TE++ ++L + +  +  +   ++    
Sbjct: 732 EDTGNSLKRANFSSAPDALLSLNGMALPPLGKLTETESNLLLMTNNTISSVSYCLEKN-- 789

Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPK 468
              L  VIS L+   +     Q P E  KT+  ++ T L+ T+ + +  L  +L    P 
Sbjct: 790 QYGLNTVISDLIKLTNAIAAVQLPEESSKTSSAQSLTSLHTTLYISLNSLLRMLAPIAPA 849

Query: 469 LANKIFDIL 477
            A++ +++L
Sbjct: 850 FASECWEVL 858


>gi|14521127|ref|NP_126602.1| isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|11135009|sp|Q9V072|SYI_PYRAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5458344|emb|CAB49833.1| ileS isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 1067

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 133/261 (50%), Gaps = 14/261 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLP 285
           ++ VW D+      + GY  N +  + K WPAD  V G+D + ++      A +++ +  
Sbjct: 549 VVDVWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKWFYSQQAASIVAFDTV 607

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             ++V  HG++L  KG+K+SKSLGN+I P EV+E  G D  R++++      ++  +   
Sbjct: 608 PYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVERAGRDTFRFYMLWATNPWENLKFSWK 667

Query: 345 GLKKRVNADLANGIGNL-VSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401
           G+++     + N + N+ V  S  M L ++D   + P    F E D+ ILS  + ++ E+
Sbjct: 668 GVEQ--VRRMLNILWNVYVLASTYMSLDNFDPRKLNPDELPFREEDKWILSRVNSLISEV 725

Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQ 457
              +++  + +A   + + V E + R++     ++ W ++  +PD+ +   Y   +V   
Sbjct: 726 ENGIESFYLTKATRALYNFVVEDLSRWYVRLIRKRLW-VEGEDPDKLAA-YYTLWKVFDV 783

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  LL  F P +A +I+  L 
Sbjct: 784 LLRLLAPFTPYIAEEIYQNLI 804



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AK 60
           K+  K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K
Sbjct: 37  KDGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVK 96

Query: 61  AAQNAGVTTKVFVDQN 76
             Q  G+ TK  +++ 
Sbjct: 97  VEQALGLKTKKEIEEK 112


>gi|237736331|ref|ZP_04566812.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421679|gb|EEO36726.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 869

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLVMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLNPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G    V+   N  N R    +L  SY  D  I +    ++   + ++K++ +KG IY 
Sbjct: 92  QNGAHPAVWTKSNIENMRRQLKLLGFSYDWDREIASYTPEYYKWNQWMFKRLYEKGLIYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W    +    N+    +  DG+ +      V   E E +FF+++ Y D+LL  +
Sbjct: 152 KKSLVNWCPDCNTVLANE----QVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGH 207

Query: 181 ----ESHPEFILPIER 192
               +  PE +L +++
Sbjct: 208 KELKDGWPEKVLTMQK 223



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 98/206 (47%), Gaps = 23/206 (11%)

Query: 278 FLLSANLPLP-KKVFSHGF---ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           FL S+ + +  +K FS      +  K EK+SKS  N +DP E+I + G D  R F++   
Sbjct: 593 FLFSSEVDVKGEKAFSKATGEELAIKVEKMSKSKNNGVDPEEMITKYGADTTRLFIMFAA 652

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESI 390
              K+  ++++GL          G    +++   ++++  + +       T+    D+++
Sbjct: 653 PPEKELEWNENGLA---------GAYRFLTKIWRLVMEHKENLEFGEIDLTKVSRDDKAL 703

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           L   ++ ++++ E++++    + ++A  + L++E   Y       E  KT  +       
Sbjct: 704 LIKLNQTIKKVTESIEDDYHFNTSIAATMELINETQDY--KVNILEGGKTTSESKK---- 757

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
           +  EVI+ + ++L  F P   +++++
Sbjct: 758 IFAEVIKNILVMLSPFTPHFCDELWE 783


>gi|42522066|ref|NP_967446.1| hypothetical protein Bd0458 [Bdellovibrio bacteriovorus HD100]
 gi|81618454|sp|Q6MQK8|SYV_BDEBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39574597|emb|CAE78439.1| valS [Bdellovibrio bacteriovorus HD100]
          Length = 894

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 27/267 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  K  F+P    V G DI+ F    W A ++   L  
Sbjct: 451 VLDTWFSSALWPFSTMGWPNETETLKT-FYPTSYLVTGHDIIFF----WVARMIMMGLEF 505

Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            +      V+ HG +   +G K+SKSLGN IDP+E+IE+ G DALR+     +  GKD  
Sbjct: 506 QRDVPFRTVYIHGLVRDSQGRKMSKSLGNSIDPVEMIEKHGADALRFTFAAHLYSGKDFK 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--------FTESDESILS 392
           + +  L+   N    N + N    ++S  L D+    PT G          +  D+ I++
Sbjct: 566 FSEQRLEGYRN--FMNKVWNAARFALSN-LSDFKA--PTEGVKALPNKVHISVFDQWIIT 620

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
               V + + E M+ +    A   +   +     D Y +  KP  L   N +  +    V
Sbjct: 621 KLEEVTKTVEEAMEQERFSDASTALYQFIWNQFCDWYIEFTKP-ILNGNNAEEKAATQLV 679

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             +V+ ++  LL  F P ++ +I+  L
Sbjct: 680 IAQVLNRIMRLLHPFAPFISEEIYQKL 706


>gi|58337105|ref|YP_193690.1| valyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311486|sp|Q5FKW5|SYV_LACAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58254422|gb|AAV42659.1| valine-tRNA ligase [Lactobacillus acidophilus NCFM]
          Length = 879

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +S  +     ER  + ++     + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D  +    +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDNPDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +VI++ G DALR+FL+   A G+D  +    +    N    N I N VSR V M L +  
Sbjct: 534 DVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKIWN-VSRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD+ I    +  + E+
Sbjct: 591 KPAHMPDTSKFDLSDKWIFDRLNHTIGEV 619



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R++G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  +   LD S + F  T +K      +
Sbjct: 99  KQGKDRHEMGREAFVKQVWDWKDEYANIIKSQWSKLGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W    + A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPTLETALSDIEVIHKDDKGAFYHVKY 204


>gi|224540962|ref|ZP_03681501.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526113|gb|EEF95218.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
          Length = 874

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 45/344 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +  L   E+        ER  +  S   + ++D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAENALKNQETDDRVDFVPERFEKTFSNWMNNIEDWCISRQVW-WGHRIPAWY 418

Query: 222 -----------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                      + P+ I         +  W  +     +T G+ +  D    +++P D  
Sbjct: 419 NNETGELYVGREAPEDIENWTQDEDVLDTWFSSALWPFSTMGWPNTEDPMFKRYFPTDTL 478

Query: 262 VIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + +   +   P  K V  HG I   +G K+SKSLGN +DP++VI+
Sbjct: 479 VTGYDIIFFWVSRMMFQSIEFTGRRPF-KNVLIHGLIRDEQGRKMSKSLGNGVDPMDVID 537

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E G D+LR+FL+   + G D  Y    LK   N    N I N     +  I +D      
Sbjct: 538 EYGADSLRWFLLNNSSPGADMRYVPAKLKSTWN--FINKIWNSARYVLMNIDEDQQLEEL 595

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW--E 435
                  +D+ IL+  + V++ + ENM          + I++ +E+ R+ +D    W  E
Sbjct: 596 DYATLNLADKWILNRLNEVIRNVDENMDK-------FEFINVGTELYRFIWDDFCSWYIE 648

Query: 436 LKK---TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           L K   T  D  +  + L   V V+  +  LL   +P +  +I+
Sbjct: 649 LSKLHLTGDDEVAKKSALNTLVYVLNTIVRLLHPIMPFVTEEIY 692



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 24/135 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTMQDMIIRYKRMQGYDALWLPGMDHAGLATQAKVEARLR 98

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTCR 107
             G++      +  VD+      + AD+           LD S + F  T ++   D  R
Sbjct: 99  EQGISRYDLGREKLVDKIWEWKEEYADIIRAQWAKLGLSLDYSKERF--TFDEGLSDAVR 156

Query: 108 ILWKKISDKGDIYKG 122
            ++ ++ +KG IY+G
Sbjct: 157 EVFVRLYEKGLIYQG 171


>gi|193794388|gb|ACF21406.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794414|gb|ACF21419.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794468|gb|ACF21446.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|193794426|gb|ACF21425.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794436|gb|ACF21430.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794442|gb|ACF21433.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAVEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|24372757|ref|NP_716799.1| leucyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|32171553|sp|Q8EHP4|SYL_SHEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24346832|gb|AAN54244.1|AE015561_4 leucyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 859

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 17/242 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     A
Sbjct: 30  QNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AINNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+ 
Sbjct: 150 YKKTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLND 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E +         ++ S K+FD     PD    + YV I
Sbjct: 206 IDTLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAI 261

Query: 233 DA 234
            A
Sbjct: 262 AA 263


>gi|323694557|ref|ZP_08108723.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323501325|gb|EGB17221.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 879

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 22/231 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 475 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  +R 
Sbjct: 531 NGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ATRF 584

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           + M ++       +    T +D  ILS  + + +++ ENM    +  AL +V   + E  
Sbjct: 585 IMMNIEKAPDADVSLSDLTMADRWILSKVNTLAKDVTENMDRYELGIALQKVYDFIWEEF 644

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D Y +  KP      +  +A+ +  +   +I  L  LL  ++P +  +IF
Sbjct: 645 CDWYIEMVKPRLWDDNDTTKAAALWTLKTVLINSLK-LLHPYMPFITEEIF 694



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 45 PNITGQLHMGHALDNTMQDILIRYKRMQGFEALWQPGTD 83


>gi|323487048|ref|ZP_08092357.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum
           WAL-14163]
 gi|323399639|gb|EGA92028.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum
           WAL-14163]
          Length = 879

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 22/231 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 475 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  +R 
Sbjct: 531 NGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ATRF 584

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           + M ++       +    T +D  ILS  + + +++ ENM    +  AL +V   + E  
Sbjct: 585 IMMNIEKAPDADVSLSDLTMADRWILSKVNTLAKDVTENMDRYELGIALQKVYDFIWEEF 644

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D Y +  KP      +  +A+ +  +   +I  L  LL  ++P +  +IF
Sbjct: 645 CDWYIEMVKPRLWDDNDTTKAAALWTLKTVLINSLK-LLHPYMPFITEEIF 694



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD
Sbjct: 45 PNITGQLHMGHALDNTMQDILIRYKRMQGFEALWQPGTD 83


>gi|229019683|ref|ZP_04176490.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229175140|ref|ZP_04302656.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608276|gb|EEK65582.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228741590|gb|EEL91783.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 881

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        D P  I         +  W  +     +T G+ D       +++  D
Sbjct: 422 WYHKETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|20091262|ref|NP_617337.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74530882|sp|Q8TN62|SYI_METAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19916383|gb|AAM05817.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 1058

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 22/263 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+      T  +    D    ++WPAD    G D  R  F++    + +     P  
Sbjct: 523 VWFDSAVASWATLKFPQTHDQFD-EWWPADFVTEGHDQTRGWFYSQLGASMVGFGRAPY- 580

Query: 288 KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HGF L  G +K+SKSLGNV+ P+++I+ +G D LR +++   A  +D  Y+ + +
Sbjct: 581 KSVLMHGFTLDAGGKKMSKSLGNVVSPLDIIDRLGADTLRAYVLSSSAPWEDLKYNLEEV 640

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMI----PTPGAFTESDESILSVCSRVLQEI 401
           +  V+  + N + N+    +  M L ++D M         A  E D  ILS    V++ +
Sbjct: 641 ET-VHRSI-NILWNVFRFPLPYMALDNFDPMQVSLDSVKDALREEDRWILSRAQSVIKAV 698

Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDR--ASTVLYVTVEVI 455
            E M   L+H+A+ +++    E + R++      + W  +  +PD+  A  VLY   EV 
Sbjct: 699 NEAMSGYLLHKAVREILEFALEDLSRWYIQLIRPRTW-TEADDPDKLAAYCVLY---EVY 754

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             +  L+  F+P LA +++  L 
Sbjct: 755 VTITKLISPFMPYLAEEMYQNLI 777


>gi|193794302|gb|ACF21363.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794460|gb|ACF21442.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAIEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|312137335|ref|YP_004004672.1| isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225054|gb|ADP77910.1| Isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 1036

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 24/267 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILR--FHAIY 274
           +IPD    ++ VWID+      +  Y   P   K   K +P D    G D  R  F++  
Sbjct: 509 RIPD----VLDVWIDSGVAGWASINY---PKEKKLFEKLFPYDFITEGHDQTRGWFYSQL 561

Query: 275 WPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
               +    +P  KKV  HGF L  +G K+SKSLGNV++P EVI + G D LR++L+   
Sbjct: 562 GCGVIAHEKIPY-KKVLMHGFTLDEQGRKMSKSLGNVVEPEEVIRKYGADVLRFYLLWAN 620

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D  +  + + K VN  + N + N+ V  +  M L +++          + D+ ILS
Sbjct: 621 KPWEDLRFVWEEV-KTVNK-MFNILWNVYVFATTYMSLDNFNPHKCKEFELKKEDKWILS 678

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVIS--LVSEVDRYFDA---QKPWELKKTNPDRASTV 447
             + V +++ E M+N L+H+A +++I   +V ++ R++      + W ++K +P +    
Sbjct: 679 KVNSVAKKVSEYMENLLLHKA-SRIIYDFIVEDLSRWYVKLIRSRTW-IEKDDPIKLGA- 735

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y    V++QL  ++    P +  +I+
Sbjct: 736 YYALYNVLKQLITIMAPITPHITEEIY 762



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y + + H+G A+  II D   RF  + G +V    G D HG  I  K  +  GV TK  +
Sbjct: 50  YCSGRIHLGTAWNKIIKDTYLRFKSMQGFNVNRKPGWDAHGLPIEHKVEKKLGVKTKKEI 109

Query: 74  DQ 75
           ++
Sbjct: 110 EE 111


>gi|228917671|ref|ZP_04081212.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228841908|gb|EEM87014.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 245

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 64/115 (55%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++  IYK
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQKVFLRLLEEEHIYK 117


>gi|225019373|ref|ZP_03708565.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
 gi|224948004|gb|EEG29213.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
          Length = 883

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 47/323 (14%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DD----------PQYIMYV------ 230
           ER +++       +KD  +SR+ + WG +IP    DD          P+   +       
Sbjct: 396 ERFDKIFYHWMENIKDWCISRQLW-WGHRIPAYYCDDCGELIVSKTAPETCPHCGGHSFK 454

Query: 231 --------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLL 280
                   W  +     +T G+ +  +  K  F+P    V G DI+ F    + + A   
Sbjct: 455 QDEDTLDTWFSSALWPFSTLGWPNQTEDLKY-FYPTSTLVTGYDIIFFWVCRMIFSAVEH 513

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  + VF HG +   +G K+SKSLGN IDP+EVI E G DALR+ L      G D 
Sbjct: 514 TGQAPF-EHVFIHGLVRDSEGRKMSKSLGNGIDPLEVIGEYGADALRFMLANGTNAGNDM 572

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            Y  + +K   N   AN + N  +R + M + D    +  P   T  D+ +L+  + +++
Sbjct: 573 RYSDEKVKAARN--FANKLWN-ATRFIMMNISDEVDTVELPSTLTIEDKWVLTQLNDLVK 629

Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELK---KTNPDRASTVLYVTVEV 454
           E+ +N++   +     ++   +  +  D Y +  K   L+   +T+ +    ++YV    
Sbjct: 630 EMTDNLEKFELSVTSQKIYDFIWNILCDWYIELTKT-RLQAGGETSLNAQKVLVYVMANT 688

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           ++    LL  F+P +  +I+  +
Sbjct: 689 LK----LLHPFMPFITEEIWQAI 707



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        KI
Sbjct: 45  EKKPYTIVIPPPNITGQLHMGHALDETLQDILIRWRRMQGYAALWVPGTDHASIATEAKI 104

Query: 59  AKAAQNAGVT 68
            +A +  G+T
Sbjct: 105 VEAMKQEGLT 114


>gi|91772253|ref|YP_564945.1| isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684526|sp|Q12ZD1|SYI_METBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91711268|gb|ABE51195.1| Isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 1058

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 22/245 (8%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++WPAD    G D  R  F++    + +     P  K V  HGF L   G+K+SKS+GNV
Sbjct: 546 EWWPADFITEGHDQTRGWFYSQLGASMVAFGKAPY-KNVLMHGFTLDGSGKKMSKSIGNV 604

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGNLVSRSVS- 367
           I P EVI++ G D LR +++   A  +D  ++ D L    R N    N + N+    +  
Sbjct: 605 IQPAEVIDKFGADTLRSYVLSASAPWEDLKFNWDELATVHRTN----NILWNVYRFPLPY 660

Query: 368 MILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           M L D+D                D+ ILS    V+ E+ + M  +L+H+A+  +   V E
Sbjct: 661 MALDDFDPQKVSYESVEAYLRSEDKWILSRMQTVIAEVNKAMDARLLHKAMRSINEFVLE 720

Query: 424 -VDRYFDA---QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILF 478
            + R++      + W ++  NPD+ + V  V  +V    A L+  F+P LA +++ +++ 
Sbjct: 721 DLSRWYIQLIRPRTW-VEADNPDKLA-VYRVLYDVFVTTAKLIAPFMPHLAEEMYQNLVR 778

Query: 479 VADEN 483
             DEN
Sbjct: 779 NIDEN 783


>gi|207344907|gb|EDZ71895.1| YGR264Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 352

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 18/293 (6%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           S++K GLK   ++R    WG  +P +     ++YVW DA   Y++ T    N      ++
Sbjct: 17  SWLKDGLKPRCITRDLV-WGTPVPLEKYKDKVLYVWFDATIGYVSIT---SNYTKEWKQW 72

Query: 256 WPADLHV-----IGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG 308
           W    HV     +GKD + FH + +P   L    N  +   + +  ++ ++  K SKS G
Sbjct: 73  WNNPEHVSLYQFMGKDNVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRG 132

Query: 309 -NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             V         +     RY+L        D  +  D    R N++L   +GN V+R + 
Sbjct: 133 VGVFGNNAQDSGISPSVWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIK 192

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +   Y+G++P   P   +  D  ++   + +L    + M+     R L   +SL +  +
Sbjct: 193 FVNAKYNGVVPKFDPKKVSNYD-GLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGN 251

Query: 426 RYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++    K    L   +P+++  V+ V + +I  ++ ++  ++P++  KI  +L
Sbjct: 252 QFLQENKLDNTLFSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKML 304


>gi|193794480|gb|ACF21452.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794500|gb|ACF21462.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794508|gb|ACF21466.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         +   +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELQDIDRALLDAIEAGFASVGGLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPETQARLATVLHTLAQAVADL 166


>gi|307354269|ref|YP_003895320.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157502|gb|ADN36882.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 1054

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 28/285 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I  VW D+      T GY    +  + K WPAD    G+D  R  F++    + +     
Sbjct: 515 IFDVWFDSAMASWATIGYPREKERFE-KLWPADFITEGQDQTRGWFYSQLGASTIAFDRA 573

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KKV  HGF L   G K+SKSLGNV+ P E+IE VGVD LR +++   A   D  ++ 
Sbjct: 574 PY-KKVMMHGFSLDSDGRKMSKSLGNVVTPEEIIERVGVDVLRMYILSASAPWDDLKFNW 632

Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTE------------SDESI 390
           +G+K    A   N + N+    +  MIL  +       G +               D  I
Sbjct: 633 EGVKTTNRA--MNILWNVYRFPLPYMILDSFAPETGESGVWDADYIRKNIKEMPVEDRWI 690

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPW-ELKKTNPDRAS 445
           +S  + +  ++  +++N  +H+A   +I+ + E + R++     Q+ W E +     +A 
Sbjct: 691 ISRINTLCSQVSVDIENCELHKASRNIINCILEDISRWYVQLIRQRMWLEEEAVEKIQAY 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             +Y    V+R+L  ++    P ++  I+  L    + R    LD
Sbjct: 751 ETMYY---VMRRLIEVIAPMAPYISESIYQNLRTNSDPRSVHMLD 792



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          Y     H+G A+  I+ D + RF R++GL+V+   G D HG  I    +N
Sbjct: 48 YTTGHIHLGTAWNKILKDTILRFRRMNGLNVIDRAGYDMHGLPIEVRVEN 97


>gi|330507469|ref|YP_004383897.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928277|gb|AEB68079.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 1053

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 21/268 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+      T  +  + +    ++WPAD    G D  R  F++    + +     P  
Sbjct: 522 VWFDSAVASWATLRFPSHEE-EFGEWWPADFITEGHDQTRGWFYSQLGASMVSFGRAPY- 579

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HGF L  +G K+SKS+GN++ P EV+E  G D LR++++   A  +D  +  + +
Sbjct: 580 KSVLMHGFTLDDQGRKMSKSIGNIVQPEEVVERFGADILRFYVLGANAPWEDLHFSWEAV 639

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYD----GMIPTPGAFTESDESILSVCSRVLQEI 401
           +    + + N   N    ++  M+L D+D     +     +    D  ILS  + + +EI
Sbjct: 640 EN--TSRMINIFWNAYRFALPYMVLDDFDLKRADLDLYKSSLRPEDRWILSRVNSLAEEI 697

Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIR 456
              M+   +HR +  +   + E + R++      + W +++ +PD+ +   Y T+ EV+ 
Sbjct: 698 TAEMEGYQLHRIVRSISDFILEDLSRWYIQLVRPRTW-IEQDDPDKLAA--YATIYEVLT 754

Query: 457 QLAILLQAFVPKLANKIFDILFVA-DEN 483
           +LA L+  F P +A  I+  L    DEN
Sbjct: 755 KLARLMAPFTPFIAESIYQNLVRGLDEN 782


>gi|330836357|ref|YP_004410998.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748260|gb|AEC01616.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 884

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 152/353 (43%), Gaps = 55/353 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+    DK L  ++       P    N   S++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WFVRMRGMADKALKAWKDGEVTFYPRRWENTYSSWLEN-IRDWCISRQLW-WGHRIPVWY 419

Query: 222 -------------------------DDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKF 255
                                       + ++  W  +     +T G+  D PD    +F
Sbjct: 420 CEDCGEMIVSRNDVTVCPKCGSSHLRQEEDVLDTWFSSWLWPFSTLGWPEDTPD--LKEF 477

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGN 309
           +P    + G DI+ F    W A ++ A+L    KV     +  G +   +G K+SKSLGN
Sbjct: 478 FPTQTLITGYDIIFF----WVARMIMASLEFTGKVPFKDVYMTGLVRDRQGRKMSKSLGN 533

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            IDP+EV++  G DA+++ L    A G+D   D D  K  + +  AN I N  SR + M 
Sbjct: 534 GIDPLEVVDLYGADAMKFTLAYMAAQGQDVLLDMDSFK--MGSRFANKIWN-ASRFLLMR 590

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           L+    +       +  D+ I +  +    ++R  ++    + A   V         D Y
Sbjct: 591 LEGRTKVTVEEKDLSVMDKWIFAELNHAAGKVRAALEGYRFNEASQTVYDFFWNDFCDWY 650

Query: 428 FDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +A K   L+  +P   DRA ++L   ++++ +   LL  F+P +  +I+  L
Sbjct: 651 IEASKH-NLESNDPVVQDRAVSLL---LDILEESLRLLHPFLPFITQEIYSKL 699



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 45/166 (27%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D + R+ R+ G   L+  GTD           +AG+ T+  V++     
Sbjct: 53  HMGHALNNSLPDTIIRYQRMAGRKTLWVPGTD-----------HAGIATQNVVERQLA-- 99

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDT---------CRILWK----------------- 111
           R+     D+  + F+  T   +K+HH           C   W+                 
Sbjct: 100 REGLSRHDLGREKFLERTWQVKKKHHSVIVKQLEKIGCSCDWEHERFTMDEGLSRAVREA 159

Query: 112 --KISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
              + ++G IYKG Y   Y         DDEV YK  +G+ Y   +
Sbjct: 160 FVTLYERGLIYKGKYLINYCPHCGTALADDEVEYKTLEGRLYQVSY 205


>gi|229025922|ref|ZP_04182314.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735368|gb|EEL85971.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 867

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        D P  I         +  W  +     +T G+ D       +++  D
Sbjct: 408 WYHKETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|117919450|ref|YP_868642.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166231644|sp|A0KTW7|SYL_SHESA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117611782|gb|ABK47236.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 859

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++ S K+FD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|323147778|gb|ADX33168.1| MetG [Vibrio vulnificus]
 gi|323147782|gb|ADX33170.1| MetG [Vibrio vulnificus]
 gi|323147792|gb|ADX33175.1| MetG [Vibrio vulnificus]
 gi|323147796|gb|ADX33177.1| MetG [Vibrio vulnificus]
 gi|323147800|gb|ADX33179.1| MetG [Vibrio vulnificus]
 gi|323147804|gb|ADX33181.1| MetG [Vibrio vulnificus]
 gi|323147808|gb|ADX33183.1| MetG [Vibrio vulnificus]
 gi|323147812|gb|ADX33185.1| MetG [Vibrio vulnificus]
 gi|323147820|gb|ADX33189.1| MetG [Vibrio vulnificus]
          Length = 143

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 7/137 (5%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259
           L+   +SR    +G +IP +     YVW+DA   Y+ +   L +   D    ++W  D  
Sbjct: 1   LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSK 60

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FH+++WPA L  +    P  VF HG++   G K+SKS G  +     
Sbjct: 61  TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120

Query: 317 IEEVGVDALRYFLVREI 333
           ++ +  + LRY+   ++
Sbjct: 121 LDHLDPECLRYYYAAKL 137


>gi|260584693|ref|ZP_05852439.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157716|gb|EEW92786.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 881

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 20/200 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DIL F
Sbjct: 431 GMEAPADAENWTQDVDVLDTWFSSALWPFSTMGWPDVEASDYKRYYPTSTLVTGYDILTF 490

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L        K V  HG I   +G K+SKSLGN +DP+EVIE+ G DA
Sbjct: 491 ----WVSRMMFQGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIEQYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAF 383
           LR+FL    A G+D  Y  D +    N    N I N  SR   M + D     +   G  
Sbjct: 547 LRWFLANGSAPGQDVRYSTDKMDAAWN--FINKIWN-ASRYALMNIGDLTVDQLDITGEK 603

Query: 384 TESDESILSVCSRVLQEIRE 403
           T +D+ IL+  ++V+ ++ E
Sbjct: 604 TLADKWILTRLNQVIAKVTE 623



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA+++ + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 99

Query: 64  NAGVT-----TKVFVDQN-------SRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++      + F++Q        + + R+    + IS  D+ R   T ++   D  + 
Sbjct: 100 GEGLSRYDLGREKFLEQTWEWKEEYASHIREQWAKMGISV-DYRRERFTLDQGLSDAVKK 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           ++  + +KG IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 159 VFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIHKDVEGAFYHMNY 205


>gi|253580599|ref|ZP_04857863.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847970|gb|EES75936.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 884

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 115/237 (48%), Gaps = 13/237 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVID 312
           F+P D+ V G DI+ F  I      L     +P   V  HG +   +G K+SKSLGN ID
Sbjct: 477 FYPTDVLVTGYDIIFFWVIRMVFSALEQTDQVPFHHVLIHGLVRDSQGRKMSKSLGNGID 536

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           P+EVI++ G DALR  L+   A G D  FY +   K   + + AN I N  SR + M L+
Sbjct: 537 PLEVIDKYGADALRLTLMTGNAPGNDMRFYWE---KVEASRNFANKIWN-ASRFIMMNLE 592

Query: 372 DYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 P         D+ ILS  + V++E  ENM+   +  A+ +V   + +   D Y 
Sbjct: 593 GKTVTEPENLNDLCAEDKWILSHLNTVIREATENMEKYELGIAVQKVYDFLWDELCDWYI 652

Query: 429 DAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   W+ ++ +P  A+  L+     + +   LL  ++P +  +I+  L   +E+
Sbjct: 653 EMAKVRLWKAEE-DPKAANDALWTLRTALTEGLKLLHPYMPFITEEIYCTLLPEEES 708



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L RF R+ G + L+  GTD           +A + T+V V
Sbjct: 46  PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 94

Query: 74  DQNSRNFRDMADVLDISYDDFIR 96
               +  ++  D  DI  ++F++
Sbjct: 95  IDKLK--KEGIDKHDIGREEFLK 115


>gi|113969341|ref|YP_733134.1| leucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123029885|sp|Q0HLJ0|SYL_SHESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113884025|gb|ABI38077.1| leucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 859

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++ S K+FD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|225175195|ref|ZP_03729191.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169371|gb|EEG78169.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 881

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 153/367 (41%), Gaps = 64/367 (17%)

Query: 164 GYFFRLSAYQDKLLS---YYESHPEFILPIER-RNEVISFVKS-----------GLKDLS 208
           G+  R S   + LLS   +    P     IER +N  I FV              ++D  
Sbjct: 345 GHCQRCSTVIEPLLSKQWFVRMKPLAKPAIERVKNGDIRFVPERFTKVYLNWVENIRDWC 404

Query: 209 LSRKTFDWGIKIP-------------DDPQY--------------IMYVWIDALTNYLTT 241
           +SR+ + WG +IP             ++PQ               ++  W  +     +T
Sbjct: 405 ISRQIW-WGHRIPAWYCDCGETIVSREEPQSCKQCGSSSLVQDDDVLDTWFSSALWPFST 463

Query: 242 TGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH- 298
            G+   PD +K    F+P D+ V G DI+ F    W A ++   L   +++  H   +H 
Sbjct: 464 LGW---PDETKDLKHFYPTDVLVTGYDIIYF----WVARMIFMGLEFMEEIPFHTVYIHG 516

Query: 299 -----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN +DP+++I+E G D LR+ L+     G D  + ++ ++   N  
Sbjct: 517 LVRDAQGRKMSKSLGNGVDPLQIIDEYGADTLRFTLITGQGPGNDQRFRQESVENSRN-- 574

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            AN I N  SR V M L D+    +      T++D  IL   ++ ++E+   M    +  
Sbjct: 575 FANKIWN-ASRFVLMNLDDFTVDQVDLSSGLTDADRWILHRYNKTVREVNRLMDAYELGE 633

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A   +   +     D Y +  K       +    + V  V   V+ +   LL  F+P + 
Sbjct: 634 AARTIYEFLWSDFCDWYIEMAKIPLYNAESEAEKNAVRSVLTYVLDRTLRLLHPFMPFIT 693

Query: 471 NKIFDIL 477
            +I+  L
Sbjct: 694 EEIWQKL 700


>gi|189425595|ref|YP_001952772.1| valyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421854|gb|ACD96252.1| valyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 897

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 152/359 (42%), Gaps = 51/359 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ ++    ++ L   +     ILP +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 363 WYVKVGPLAERALQAVKDGRTRILPKQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWF 420

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP                ++  W  +     +T G+ D     K +F+
Sbjct: 421 CDHCGKITVSMEDPTSCSQCGSDELRQETDVLDTWFSSALWPFSTMGWPDQTAELK-RFY 479

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKSLGNV 310
           P    V G DIL     +W A ++   L     +P K V+ H  +    G+K+SKS GNV
Sbjct: 480 PTATLVTGFDIL----FFWVARMMMMGLHFMDEVPFKDVYIHALVRDAHGQKMSKSKGNV 535

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ VI++ G DA R+ L    A G+D    ++ +    N    N + N  +R   M L
Sbjct: 536 IDPLTVIDQYGTDAFRFTLAAFAAQGRDIKLAEERISGYRN--FCNKVWN-AARFTMMNL 592

Query: 371 KDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
           + +  D ++      TESDE IL   +   +   + +     + A   +     SE  D 
Sbjct: 593 EGFEPDQLVFEDLRLTESDEWILHRLNETARATNQALDEYRFNEAAMTLYQFTWSEFCDW 652

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           Y +  K  EL   +P R  T  YV   V+  L  LL   +P +  +I+  L   D  RC
Sbjct: 653 YLELSKQ-ELYGDDPLRRRTTQYVLWSVLEHLLRLLHPIMPFITEEIWQTLPKGD--RC 708


>gi|289422687|ref|ZP_06424527.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156866|gb|EFD05491.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 883

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 23/237 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-----HKGEKISKSLGN 309
           ++P  + V G DI+ F  +       S+   +  K F H  I       +G K+SKSLGN
Sbjct: 476 YFPTSVLVTGYDIIFFWVV---RMAFSSMFCMNDKPFEHVLIHGLVRDSEGRKMSKSLGN 532

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFY-DKDGLKKRVNADLANGIGNLVSRSVS 367
            IDP+E+I++ G DALR+ L+   + G D  FY ++    +  N  L N      SR V 
Sbjct: 533 GIDPLEIIDQFGADALRFTLITGNSPGNDMRFYMERVEFARNFNNKLWNA-----SRFVF 587

Query: 368 MILKD---YDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
           M L+D    DG+         T +D+ I+S  +R++ E+  NM    +  AL +      
Sbjct: 588 MNLEDESLLDGLTREAVEKDLTLADKWIISRANRIVDEVNTNMDKFELGIALQKSYEFTW 647

Query: 422 SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SE  D Y +  KP  L   + D     LY    V+ ++  LL  F+P +  +I+  L
Sbjct: 648 SEYCDWYIEIVKP-RLYGDDRDAKRAALYTLTYVLEKILKLLHPFIPFITEEIYSYL 703


>gi|116329125|ref|YP_798845.1| valyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116121869|gb|ABJ79912.1| Valine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 882

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 33/277 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ +     K K++P  + V G DI+ F    W + 
Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTMGWPEQTPDLK-KYYPTSVLVTGFDIIFF----WVSR 495

Query: 279 LLSANLPLPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   +   K     KV  HG +  K G+K SKS+GNVIDP+ ++E+ G D+ R+FL   
Sbjct: 496 MIMMGMKFLKAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMEKYGTDSFRFFLAAT 555

Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---- 385
           +  GKD  +D+   DG +        N I N  SR + M LK  +  +PT G  +E    
Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLK--ESFVPT-GITSEIEKD 606

Query: 386 ---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440
               D+ ILS  +R L+E  +       +   A +   +     D Y +  KP    K +
Sbjct: 607 LEPMDQWILSRFNRCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVS 666

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P        V  +V+ +   LL  F+P L  ++  + 
Sbjct: 667 PRSTEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703


>gi|114046568|ref|YP_737118.1| leucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123131668|sp|Q0HXU4|SYL_SHESR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113888010|gb|ABI42061.1| leucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 859

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++ S K+FD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGSDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|257869995|ref|ZP_05649648.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804159|gb|EEV32981.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 879

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 29/279 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 429 GLEAPADAENWTQDPDVLDTWFSSALWPFSTMGWPDENSADYQRYFPTNTLVTGYDIIAF 488

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP+EVIE+ G DA
Sbjct: 489 ----WVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEKYGADA 544

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+FL    A G+D  +  + +      D A    N +  +   +L + +GM  T     
Sbjct: 545 LRWFLSNGSAPGQDVRFSYEKM------DAAWNFINKIWNASRFVLMNVEGMTVTDIDFS 598

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  + +D  IL+  +  ++++ E         A  Q+ + + +   D Y +  K   L  
Sbjct: 599 GEKSVADRWILTRLNETIEKVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYG 657

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N         + V V+ Q+  LL   +P +  +I+  L
Sbjct: 658 ENEAAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKL 696



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  +   LD S + F  T ++   D  R
Sbjct: 100 EQGISRYDLGREKFVDQVWEWKEEYAGHIREQWAKLGLSLDYSRERF--TLDEGLSDAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151
            ++  + +K  IY+G Y   W      A  + + ++K  +G +Y+
Sbjct: 158 KVFVTLYEKDLIYRGEYIINWDPQARTALSDIEVIHKEIEGAFYH 202


>gi|291461006|ref|ZP_06026392.2| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379583|gb|EFE87101.1| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 862

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 95  QNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 155 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 211

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 212 EIKDGWPEKVLTMQK 226



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 87/180 (48%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 611 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 668

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             L+  +  ++   +D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 669 WRLIFENSELVKNAHDDI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 726

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y           TN   +     +    ++++ ++L  FVP   ++I++ L
Sbjct: 727 MELINEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEEL 776


>gi|237739547|ref|ZP_04570028.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423155|gb|EEO38202.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 859

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 87/180 (48%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             L+  +  ++   +D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLIFENSELVKNAHDDI--DYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y           TN   +     +    ++++ ++L  FVP   ++I++ L
Sbjct: 724 MELINEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEEL 773


>gi|116330266|ref|YP_799984.1| valyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123955|gb|ABJ75226.1| Valine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 882

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 33/277 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ +     K K++P  + V G DI+ F    W + 
Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTMGWPEQTPDLK-KYYPTSVLVTGFDIIFF----WVSR 495

Query: 279 LLSANLPLPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   +   K     KV  HG +  K G+K SKS+GNVIDP+ ++E+ G D+ R+FL   
Sbjct: 496 MIMMGMKFLKAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMEKYGTDSFRFFLAAT 555

Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---- 385
           +  GKD  +D+   DG +        N I N  SR + M LK  +  +PT G  +E    
Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLK--ESFVPT-GITSEIEKD 606

Query: 386 ---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440
               D+ ILS  +R L+E  +       +   A +   +     D Y +  KP    K +
Sbjct: 607 LEPMDQWILSRFNRCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVS 666

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P        V  +V+ +   LL  F+P L  ++  + 
Sbjct: 667 PRSTEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703


>gi|51891504|ref|YP_074195.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826240|sp|Q67SJ2|SYV_SYMTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51855193|dbj|BAD39351.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 911

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 150/354 (42%), Gaps = 56/354 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ ++    +  +   ES    I+P ER  +V       ++D  +SR+ + WG +IP   
Sbjct: 369 WYVKMKPLAEPAIRAVESGQIKIVP-ERFTKVYLHWMENIQDWCISRQIW-WGHRIPVWY 426

Query: 222 -DDPQYI------------------------MYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
            DD  ++                        +  W  +     +T G+ D+    +  F+
Sbjct: 427 CDDCGHLTVSETDPTRCEKCGSANIRQDEDALDTWFSSALWPFSTLGWPDDTADLR-YFF 485

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNV 310
           P D+ V G DIL F    W A ++ ++L L  K+  H  +LH      +G K+SKSLGN 
Sbjct: 486 PTDVLVTGYDILFF----WVARMIFSSLELTGKIPFHTVVLHGLVRDAQGRKMSKSLGNG 541

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DPI+VI++ G DALR+ LV   + G D  +  + ++   N   AN + N  SR V M L
Sbjct: 542 VDPIDVIDQYGTDALRFMLVTGSSPGNDIRFHTERVENARN--FANKLWN-ASRFVLMNL 598

Query: 371 KDYDGMIPTPGAFTESD------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
            D+       GA  + D          +  +R + E+    Q     R +   I   SE 
Sbjct: 599 ADWQPA--AEGAALQYDVADRWIRHRFNEAARAVNELLGEYQYGEAARTIYDFI--WSEF 654

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  KP      +P RA+        V+     LL  F+P +   I+  L
Sbjct: 655 CDWYIELVKPRLYNPADPTRAA-AQETLARVLEGTLRLLHPFMPYITEAIWQKL 707


>gi|294783391|ref|ZP_06748715.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294480269|gb|EFG28046.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 859

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 87/180 (48%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             L+  +  ++   +D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLIFENAELVKNAHDEI--DYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y           TN   +     +    ++++ ++L  FVP   ++I++ L
Sbjct: 724 MELINEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEEL 773


>gi|18310901|ref|NP_562835.1| valyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|81766834|sp|Q8XJ42|SYV_CLOPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18145583|dbj|BAB81625.1| valine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 880

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCQEYSLADQWILSRTNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453
           +++E+ ENM+   +  AL +V   +     D Y +  KP  +   + ++A  V++ V   
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+     LL   +P +  +I+  L    E+
Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|331082707|ref|ZP_08331830.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400326|gb|EGG79968.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 881

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 21/240 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + L    K   H  ++H      +G K+SKSLG
Sbjct: 477 FYPTDVLVTGYDIIFF----WVIRMVFSGLEQTGKTPFHHVLIHGLVRDSQGRKMSKSLG 532

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M
Sbjct: 533 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERIEASRN--FANKVWN-ASRFIMM 589

Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            L+  D  IP        T +D+ ILS  + + +E  EN+    +  A+ +V   + E  
Sbjct: 590 NLEKAD--IPKNIDLQTLTGADKWILSKVNTLAKEATENLDKYELGIAVQKVYDFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  KP  L        +  L+    V+     LL  ++P +  +I+  L   +E+
Sbjct: 648 CDWYIEMVKP-RLYNDEDTTKAAALWTLKTVLSNALKLLHPYMPFITEEIYCTLCPEEES 706



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 4  REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          R+K   +  +  PN   Q H+GHA +  + D+L RF R+ G + L+  GTD
Sbjct: 34 RDKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD 84


>gi|309804780|ref|ZP_07698844.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165890|gb|EFO68109.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAT 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+     +    +   +++D            M   LD S + F  T +       R
Sbjct: 99  KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|237736668|ref|ZP_04567149.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420530|gb|EEO35577.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 886

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 16/267 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F L    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELETFYPTSTLVTGADIIFFWVARMIMFGLYEMK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+ +IEE G DA+R+ ++   + G+D ++ 
Sbjct: 509 EIPFKNVFFHGIVRDELGRKMSKSLGNSPDPLNLIEEYGADAIRFSMLYNTSQGQDVYFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
           +  L+  +  + AN I N V+R V M L+ +D   +      F   DE I S  +   +E
Sbjct: 569 EKLLE--MGRNFANKIWN-VARFVIMNLEGFDVKSVNKDELKFELVDEWIFSRLNETTKE 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIR 456
           + + +   L+  A   V   +     D Y +  K   +  +++  +  +T  YV   V+ 
Sbjct: 626 VHDCLDKFLLDDAAKAVYEFLRGDFCDWYVELAKVRLYNNEESGKESKTTAQYVLWTVLE 685

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
               LL  F+P +  +I+  + V  E 
Sbjct: 686 AGLKLLHPFMPFITEEIWQKIKVEGET 712


>gi|323147830|gb|ADX33194.1| MetG [Vibrio vulnificus]
          Length = 143

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259
           L+   +SR    +G +IP +     YVW+DA   Y+ +   L +   D    ++W  D  
Sbjct: 1   LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSK 60

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FH+++WPA L  +    P  VF HG++   G K+SKS G  +     
Sbjct: 61  TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120

Query: 317 IEEVGVDALRYFLVREI 333
            + +  + LRY+   ++
Sbjct: 121 FDHLDPECLRYYYAAKL 137


>gi|228910293|ref|ZP_04074110.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849353|gb|EEM94190.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 867

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ D       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|228902987|ref|ZP_04067127.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967560|ref|ZP_04128586.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792139|gb|EEM39715.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856663|gb|EEN01183.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 867

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ D       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|312143436|ref|YP_003994882.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904087|gb|ADQ14528.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 884

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 22/263 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ S+    F+P D+ V G+DI+ F    W A ++   L
Sbjct: 451 VLDTWFSSALWPFSTLGW---PEQSEDLISFYPTDVLVTGRDIIFF----WVARMIFMGL 503

Query: 285 PLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +     ++ HG I   +G K+SKSLGN IDP+EV+++ G DALR+ L+     G D
Sbjct: 504 KFQDEKPFSDIYIHGLIRDAQGRKMSKSLGNGIDPLEVVDKYGADALRFTLITGNTPGND 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSR 396
             + ++ L+   N   AN I N  SR V M L+D+D   +  +    T +D+ + S  + 
Sbjct: 564 MRFREERLEASRN--FANKIWN-ASRFVLMNLEDFDLEALDKSDLKETLADKWMQSRLNT 620

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           V+ EI + +++       + +   +     D Y +  K    ++ +P    T  Y  +  
Sbjct: 621 VIAEIDDALEDYNFGEMASSLYDFIWNEFCDWYIELLKARLYQEEDPAAKLTAQYYALNT 680

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  L  LL   +P +  +I+  L
Sbjct: 681 LESLLRLLHPVMPFITEEIWQKL 703



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 30/200 (15%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ---- 56
           E EK   S  +  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD H      
Sbjct: 34  ETEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQGYRSLWLPGTD-HASIATE 92

Query: 57  -KIAKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
            K+    ++ G+                  + + ++ +   + M    D S + F  T +
Sbjct: 93  VKVVDKLKDQGIEKDEIGREGFLEKAWEWKEEYGNRITNQLKKMGSSCDWSRERF--TLD 150

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQ 158
           +   +    ++ ++ ++G IY+G Y   +        +D EV +K  +G++Y   H    
Sbjct: 151 EGCSEAVEEVFIQLYNEGLIYQGDYIVNWCPSCHTTLSDIEVEHKETEGKFY---HMKYP 207

Query: 159 WMEEEGYFFRLSAYQDKLLS 178
           +  +EGY    +   + +L 
Sbjct: 208 YKNKEGYITVATTRPETMLG 227


>gi|259501662|ref|ZP_05744564.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191130|ref|ZP_07267384.1| valyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806332|ref|ZP_07700345.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309807726|ref|ZP_07701660.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809959|ref|ZP_07703807.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871976|ref|ZP_07732058.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874665|ref|ZP_07734689.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921098|ref|ZP_08277621.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259166947|gb|EEW51442.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167316|gb|EFO69482.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308168986|gb|EFO71070.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169747|gb|EFO71792.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089895|gb|EFQ48315.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311092553|gb|EFQ50915.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935005|gb|EGG31494.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+     +    +   +++D            M   LD S + F  T +       R
Sbjct: 99  KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|193794516|gb|ACF21470.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLHMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEDIDRALLDAIEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|315653725|ref|ZP_07906645.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325913051|ref|ZP_08175424.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|315489087|gb|EFU78729.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325477731|gb|EGC80870.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+     +    +   +++D            M   LD S + F  T +       R
Sbjct: 99  KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|309803196|ref|ZP_07697293.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164704|gb|EFO66954.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+     +    +   +++D            M   LD S + F  T +       R
Sbjct: 99  KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|315186220|gb|EFU19981.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 882

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 151/360 (41%), Gaps = 47/360 (13%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H PV+    E +F R+     K L  +E       P +  N    ++++ ++D  +SR+ 
Sbjct: 353 HVPVEPYLSEQWFVRMDTMAQKALKAWEEGKIQFFPRKWENTYTHWLRN-IRDWCISRQL 411

Query: 214 FDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLTTTGYL 245
           + WG +IP              +DP              + ++  W  +     +T G+ 
Sbjct: 412 W-WGHRIPVWYCDDCGAQMVLREDPTACTSCGSTNIRQDEDVLDTWFSSWLWPFSTLGWP 470

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHK- 299
           +  +  K +F+P    V   DI+ F    W A ++ A+L    +V     +  G +  K 
Sbjct: 471 EETEDLK-RFFPTTTLVTAYDIIFF----WVARMIMASLEFMHEVPFRDIYITGLVRDKQ 525

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+E++   G DALR+ L    A G+D   DKD  +  V A  AN I 
Sbjct: 526 GRKMSKSLGNGIDPLEIVNVYGADALRFTLAFLAAQGQDVLLDKDTFQ--VGAHFANKIW 583

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR + M L+    +       T+ D  IL   +R    + + ++    + A      
Sbjct: 584 N-ASRFILMNLEGRRLIPFEKIEKTDIDRWILHRLNRAAAAVSDALETYRFNEAAQTAYE 642

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  D Y ++ K   L   +      ++ + + V+ Q   LL  F+P +  +++  L
Sbjct: 643 FFWSDFCDWYIESAK-LSLNGDDEQEKDRIVSLLLFVLEQALKLLHPFLPFVTEELYQKL 701


>gi|168204897|ref|ZP_02630902.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170663625|gb|EDT16308.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 880

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADQWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453
           +++E+ ENM+   +  AL +V   +     D Y +  KP  +   + ++A  V++ V   
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+     LL   +P +  +I+  L    E+
Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|325911674|ref|ZP_08174081.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476440|gb|EGC79599.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNA-GVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+   +  + F+ Q               +  M   LD S + F  T +       R
Sbjct: 99  KQGQDRYQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|320334772|ref|YP_004171483.1| Valyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756061|gb|ADV67818.1| Valyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 884

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 52/359 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F R+    D +L+  +     ++P +R  +V       ++D ++SR+ + 
Sbjct: 370 PVEPIISTQWFVRMKPMADAVLAGLDRGDMQLVP-DRYTKVNRDWLENIRDWNISRQLW- 427

Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243
           WG +IP                       DP+Y          +   W  +     +T G
Sbjct: 428 WGHRIPAWYDDAGNVYVPDLENPDLDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 487

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KG 300
           + D       KF+P  + V G DIL F    +   A+  +   P    +  HG  L  KG
Sbjct: 488 WPDEASEDYRKFYPTQVLVTGYDILFFWVARMQMAAYHFTGRAPF-STIMLHGLYLDAKG 546

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN +DP+E+ E+ GVDA R+        G+D  +D    ++  N   AN + N
Sbjct: 547 QKMSKSKGNGVDPLELFEQYGVDAARFAFTYLSTGGQDIKHDPRRFEQGRN--FANKLWN 604

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R   M L+      P  G  T +D  I S  +  ++E+  ++    I  A+    + 
Sbjct: 605 -AARFAFMNLEGE----PEAGEATLADRWIRSRLNDTVREVTAHLDAFDIGAAIRTAYAF 659

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   D Y +A KP  L+  N    +T+     +V+  +  LL  F+P + ++I++ L
Sbjct: 660 TWDEFCDWYIEAAKP-ALRARNAATRATL----KDVLEGILKLLHPFMPFITSEIYEAL 713



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA +  + D L R+ R+ G + L+  GTD           +AG++T+V V++ 
Sbjct: 61  HLGHALDNTLIDTLIRYKRMAGFEALYLPGTD-----------HAGISTQVVVERQ 105


>gi|169824504|ref|YP_001692115.1| valyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831309|dbj|BAG08225.1| valyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 872

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 38/352 (10%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H+ V+ +  + +F ++       L  Y+      +P       ++++++ ++D  +SR+ 
Sbjct: 349 HSTVEPLISKQWFVKMDKLAKLALDAYKKEEIRFIPKRFEKVYVNWLEN-IRDWCISRQL 407

Query: 214 FDWGIKIP----------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGS 251
           + WG ++P                 DPQ        +  W  +     +T G+ +  +  
Sbjct: 408 W-WGHRLPVYYHNETGEVVVARENPDPQKYTQDPDTLDTWFSSALWPFSTLGWPNETEDL 466

Query: 252 KAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           K  F+P ++ V G DI+ F  I   + +      +P  K V+  G +   +G K+SKSLG
Sbjct: 467 KY-FFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPF-KDVYLTGLVKDSQGRKMSKSLG 524

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVS 367
           N IDPIEVI++ G DALR+ L+     G D  FY +   K   N +  N + N  SR V 
Sbjct: 525 NGIDPIEVIDQYGADALRFALITGNTPGNDSRFYME---KVEANRNFCNKLWN-ASRFVF 580

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425
           M ++D    I       E D+ I+S  + V+ E+  N+    I  A  ++      V  D
Sbjct: 581 MNVEDNVKNIDEVELQIE-DKWIISSLNNVIDEVSTNLNKYEIGIAAEKIYDFTWNVFCD 639

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP  L   N     + + V +  +  +  LL  F+P +  +I+  L
Sbjct: 640 WYIELVKP-RLYGDNAKLKDSAISVLIYTLTNVIKLLHPFMPYITEEIYSYL 690



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D+L R +R+DG   L+  GTD      A  A  A V  K+  +  S+  
Sbjct: 52  HLGHALNNTIQDILIRKNRMDGYSALWVPGTDH-----ASIATEAKVVNKLKEEGKSKES 106

Query: 81  RDMADVLDISYD 92
                 L+ S+D
Sbjct: 107 LGRDGFLEASWD 118


>gi|291556681|emb|CBL33798.1| valyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 882

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 22/246 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHK-GEKISKSL 307
           F+P +  V G DI+ F    W A ++ + L      P  K V  HG +  + G K+SKSL
Sbjct: 478 FYPTNTLVTGYDIIPF----WVARMIFSGLEHTGQKPF-KDVLIHGLVRDELGRKMSKSL 532

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP+EVI++ G DALR  LV   A G D  + +  +    N   AN + N  SR + 
Sbjct: 533 GNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSRN--FANKLWN-ASRYIL 589

Query: 368 MIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-- 424
           M L +D  G +  P      D+ ILS+ + +++ +  N+ +  +  A+  +   + +V  
Sbjct: 590 MNLPEDMQGAV-LPENLPIEDKWILSLYNDLIKNVTSNLDSYELGVAVQNLFDFIWDVYC 648

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483
           D Y +  KP   +     RA+    V V V++ +  LL  F+P +  +I+  +  VAD++
Sbjct: 649 DWYIELTKPRIAEGGETARAAQ--NVLVYVMQGILKLLHPFMPFITEEIWQSMPIVADKD 706

Query: 484 RCFQSL 489
              +S+
Sbjct: 707 NNPESI 712



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        KI  A +
Sbjct: 40  TIVIPPPNITGQLHMGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKIVNAMK 99

Query: 64  NAGVT 68
             G+T
Sbjct: 100 EEGLT 104


>gi|168214160|ref|ZP_02639785.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714391|gb|EDT26573.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 880

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 24/269 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADQWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++E+ ENM+   +  AL +V   +     D Y +  KP  L   +      V  V   V
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTV 677

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +     LL   +P +  +I+  L    E+
Sbjct: 678 LNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|291458879|ref|ZP_06598269.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418133|gb|EFE91852.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 904

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 23/242 (9%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+P D+ V   DI+ F  +   +     +  LP  + V  HG +   +G K+SKSLGN I
Sbjct: 476 FYPTDVLVTAYDIIFFWVVRMVFSGIEQTGKLPF-RHVLIHGLVRDDQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDG--FYDKDGLKKRVNADLANG----IGNLVSRS 365
           DP+EVI + G DALR  L+   A G D   ++ K    +     + N     + NL   S
Sbjct: 535 DPLEVIRKYGADALRMTLLSGNAPGNDMRFYWSKAEAGRNFMNKVWNASRFIMMNLDEES 594

Query: 366 VSMILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +S++  +  G +        P     +D  ILS  +   QEI  N+ +  +  AL ++ S
Sbjct: 595 LSVLRGEGGGELDAILERSRPKELYAADRWILSRMNHTAQEIERNLSSYDLGIALDKIQS 654

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + E   D + +  KP   +    DR S +  L+   EV+     LL  F P +  +I+D
Sbjct: 655 FLWEEFCDWFIEMVKP---RLHGEDRESRIAALWTLCEVLMCSLKLLHPFCPFITEEIYD 711

Query: 476 IL 477
            L
Sbjct: 712 TL 713


>gi|312871640|ref|ZP_07731732.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311092865|gb|EFQ51217.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+     +    +   +++D            M   LD S + F  T +       R
Sbjct: 99  KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|312873260|ref|ZP_07733316.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091271|gb|EFQ49659.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+LS  +   +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D    ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L +   
Sbjct: 535 VVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPEDAA 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  SD+ I    +RV++++
Sbjct: 592 AAHMPDVDTFDLSDKWIFDKLNRVVKKV 619



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G        +K+ 
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEEKLR 98

Query: 60  KAAQNAGVTTKVFVDQNSRNFRD------------MADVLDISYDDFIRTTEKRHHDTCR 107
           K  Q+     +    +   +++D            M   LD S + F  T +       R
Sbjct: 99  KQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERF--TLDDGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++ K+ ++G IY+G Y   +  + E   +D EV +K  +G +Y+
Sbjct: 157 KVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYH 201


>gi|75759956|ref|ZP_00740025.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218899626|ref|YP_002448037.1| valyl-tRNA synthetase [Bacillus cereus G9842]
 gi|74492553|gb|EAO55700.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218541207|gb|ACK93601.1| valyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 881

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ D       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|167751126|ref|ZP_02423253.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702]
 gi|167655841|gb|EDR99970.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702]
          Length = 882

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 22/246 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHK-GEKISKSL 307
           F+P +  V G DI+ F    W A ++ + L      P  K V  HG +  + G K+SKSL
Sbjct: 478 FYPTNTLVTGYDIIPF----WVARMIFSGLEHTGQKPF-KDVLIHGLVRDELGRKMSKSL 532

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP+EVI++ G DALR  LV   A G D  + +  +    N   AN + N  SR + 
Sbjct: 533 GNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSRN--FANKLWN-ASRYIL 589

Query: 368 MIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-- 424
           M L +D  G +  P      D+ ILS+ + +++ +  N+ +  +  A+  +   + +V  
Sbjct: 590 MNLPEDMQGAV-LPENLPIEDKWILSLYNDLIKNVTSNLDSYELGVAVQNLFDFIWDVYC 648

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483
           D Y +  KP   +     RA+    V V V++ +  LL  F+P +  +I+  +  VAD++
Sbjct: 649 DWYIELTKPRIAEGGETARAAQ--NVLVYVMQGILKLLHPFMPFITEEIWQSMPIVADKD 706

Query: 484 RCFQSL 489
              +S+
Sbjct: 707 NNPESI 712



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD        KI  A +
Sbjct: 40  TIVIPPPNITGQLHMGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKIVNAMK 99

Query: 64  NAGVT 68
             G+T
Sbjct: 100 EEGLT 104


>gi|223939187|ref|ZP_03631069.1| valyl-tRNA synthetase [bacterium Ellin514]
 gi|223892140|gb|EEF58619.1| valyl-tRNA synthetase [bacterium Ellin514]
          Length = 882

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 156/373 (41%), Gaps = 47/373 (12%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L++   Y+ DE YK   G Y      P++    E +F +  + Q        S  E    
Sbjct: 335 LKELGSYDKDEPYKNNVG-YSERADVPIEPRLSEQWFLKYPSTQPA--REVASSGEMRFF 391

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------DDPQYIMY 229
            ER  +V       ++D  +SR+ + WG +IP                     DP  ++ 
Sbjct: 392 PERWGKVYDHWMQNIQDWCISRQLW-WGHQIPVWYRGHEVKCQVDSPGADWKQDPD-VLD 449

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W    +++L     +D  + +KAKF+P  + V G DI+ F    W A ++ A      K
Sbjct: 450 TW---FSSWLWPFATMD--EATKAKFYPTSVLVTGPDIIFF----WVARMIMAGFEYTGK 500

Query: 290 -----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
                V+  G I  K G K+SK+LGN  DP+E+I + G D LR+ ++R    G+D  +D+
Sbjct: 501 KPFSDVYLTGIIRDKQGRKLSKTLGNSPDPLELIGKYGADGLRFGIMRSAPLGQDVLFDE 560

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             ++  +  +  N + N   R   M   +  G I  P   T  D+ IL   +  ++E+  
Sbjct: 561 KDVE--LGRNFCNKLWN-ACRFRQMQDGEVQGEI-NPSKLTGDDKWILLRLNTAIEELNT 616

Query: 404 NMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++       A   +     SE  D Y +A K   L  T+    +  L V   V+     L
Sbjct: 617 SLAEYKFSEATQTLYRFFWSEYCDWYVEASKA-VLHGTDEAAKANTLAVLDFVLSHTLRL 675

Query: 462 LQAFVPKLANKIF 474
              FVP +  +++
Sbjct: 676 FHPFVPFITEELW 688


>gi|315180776|gb|ADT87690.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 376

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 11/191 (5%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDG 345
           P  VF HG++   G K+SKS G  +     +  +  + LRY+   ++    D    + + 
Sbjct: 10  PNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLED 69

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV--LQEIRE 403
             +RVNAD+ N I NL SR+   I K +DG +    A  E     ++   R+  L E RE
Sbjct: 70  FTQRVNADVVNKIVNLASRNAGFITKRFDGKLSDRFAEPELYNEFVAAADRIAELYEARE 129

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRA-STVLYVTVEVIRQLAIL 461
                   RA+ ++ +L  + ++Y D + PW + K+   D+A   +  V + + R L   
Sbjct: 130 ------FGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLLTY 183

Query: 462 LQAFVPKLANK 472
           L+  +P LA +
Sbjct: 184 LKPVMPGLAAR 194


>gi|293363815|ref|ZP_06610555.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552620|gb|EFF41390.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 830

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 45/349 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y +  + PV+ +    +F ++  +   +L + +S        +R  +++    S + D +
Sbjct: 342 YSDRSNTPVEILVLPQWFVKMENFGKIILEHLQSKNRVDFYPKRFVKILKHWMSNVHDWT 401

Query: 209 LSRKTFDWGIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           +SR+ + WG +IP                     DP  ++  W  +  +     G+  N 
Sbjct: 402 ISRQLW-WGHRIPAWYKDDQIKVQIESPGLGWVQDPD-VLDTWFSSGLSPFVFLGWPQN- 458

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKS 306
           D    +++P D+ V G D++ F       F L      P K +  HG I   +G K+SKS
Sbjct: 459 DKMLKRYYPTDVLVTGSDLIFFWIARMYMFGLDVMKEKPFKHLLIHGLIRDAQGRKMSKS 518

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           L N IDP++VI E G DAL++FL+   + G D  Y  + LK      L N + N +SR +
Sbjct: 519 LNNGIDPLDVINEYGADALKWFLITNTSPGLDIKYSTEKLKSA--WALCNKLWN-ISRFI 575

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             + +D +         T++D+ I +    +++ I + M+N       +Q+   +     
Sbjct: 576 EQLPQDQNTKA------TDADKWINNKLQVLIKNIDKAMKNYEFTLVGSQISKFI----- 624

Query: 427 YFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y D    + E  K+NP +        +E+++   I +  F+  +  KIF
Sbjct: 625 YTDLSGWYVEFLKSNPSKK-----FAMELLKNTLIAINPFLSFITYKIF 668



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          PN   + H+GHA++ +I D + R+ +L G D  + +G D  G  IA  A+
Sbjct: 42 PNVTGKLHLGHAFDTMIPDTIIRYKKLKGFDTFWISGMDHAG--IATQAK 89


>gi|55980130|ref|YP_143427.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|55771543|dbj|BAD69984.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 878

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 7/193 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K +  +N R  ++   ++ I Y  D  + T E  ++   + ++ K+ +KG  Y+
Sbjct: 92  KFGVHPKDWTYENIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E
Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208

Query: 182 --SHPEFILPIER 192
             + PE +  ++R
Sbjct: 209 GLNWPEKVKAMQR 221


>gi|291531784|emb|CBK97369.1| valyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 882

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 22/246 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFILHK-GEKISKSL 307
           F+P +  V G DI+ F    W A ++ + L      P  K V  HG +  + G K+SKSL
Sbjct: 478 FYPTNTLVTGYDIIPF----WVARMIFSGLEHTGQKPF-KDVLIHGLVRDELGRKMSKSL 532

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP+EVI++ G DALR  LV   A G D  + +  +    N   AN + N  SR + 
Sbjct: 533 GNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSRN--FANKLWN-ASRYIL 589

Query: 368 MIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-- 424
           M L +D  G +  P      D+ ILS+ + +++ +  N+ +  +  A+  +   + +V  
Sbjct: 590 MNLPEDMQGAV-LPENLPIEDKWILSLYNDLIKNVTSNLDSYELGVAVQNLFDFIWDVYC 648

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483
           D Y +  KP   +     RA+    V V V++ +  LL  F+P +  +I+  +  VAD++
Sbjct: 649 DWYIELTKPRIAEGGETARAAQ--NVLVYVMQGILKLLHPFMPFITEEIWQSMPIVADKD 706

Query: 484 RCFQSL 489
              +S+
Sbjct: 707 NNPESI 712



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I+ PN   Q H GHA +  + D+L R+ R+ G   L+  GTD        KI  A +
Sbjct: 40  TIVISPPNITGQLHTGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKIVNAMK 99

Query: 64  NAGVT 68
             G+T
Sbjct: 100 EEGLT 104


>gi|302671511|ref|YP_003831471.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316]
 gi|302395984|gb|ADL34889.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316]
          Length = 890

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 14/229 (6%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + ++      P    +F HG +   +G K+SKSLGN I
Sbjct: 482 FFPTDVLVTGYDIIFFWVIRMIFSSYENMGTYPFHTVLF-HGLVRDSQGRKMSKSLGNGI 540

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM-I 369
           DP+++IE  G DALR  L+   A G D  FY++     R   + AN + N  SR + M +
Sbjct: 541 DPLDIIENYGADALRLTLITGNAPGNDMRFYNERVENSR---NFANKVWN-ASRFIMMNM 596

Query: 370 LKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            +D    I    P      D+ ILS  +  ++E+ ENM++  +  A+ +V   + +   D
Sbjct: 597 AEDAKSAIHQDMPEGLEPVDKWILSKLNNTVKEVTENMEHYELGIAVQKVYDFIWDEFCD 656

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y +  KP      +       L+    V+     LL  ++P +  +IF
Sbjct: 657 WYIEMVKPRLYNSDDAVSHEAALWTLQTVLLNALKLLHPYMPFITEEIF 705


>gi|229163414|ref|ZP_04291365.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619983|gb|EEK76858.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 867

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ D       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|167630790|ref|YP_001681289.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167593530|gb|ABZ85278.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 894

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 159/375 (42%), Gaps = 53/375 (14%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
           A GQ Y      V+ M    +F R+    +  +   ++     +P ER  ++       +
Sbjct: 346 AVGQCYRCD-TVVEPMVSPQWFVRMKPLAEPAMEVVKNGRLKFVP-ERFTKIYLGWLENI 403

Query: 205 KDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTNYLTTTG---YLDNPD-------- 249
           +D  +SR+ + WG +IP    DD  YI     + L       G   +  +PD        
Sbjct: 404 RDWCISRQLW-WGHRIPVWYCDDCDYIYCGRAEELPEVCPKCGASHFEQDPDVLDTWFSS 462

Query: 250 --------------GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKV 290
                             K++P  + V G+DI+ F    W A ++   L     +P ++V
Sbjct: 463 GLWPFSTLGWPEKTPELVKYYPTSVLVTGRDIIFF----WVARMVFMGLEFMGDVPFREV 518

Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           F HG IL  +G K+SKSLGN +DPIE+I++ G D LR+ LV     G D  +  + L+  
Sbjct: 519 FIHGLILDAQGRKMSKSLGNGVDPIEIIDQYGADTLRFMLVTGNTPGNDIRFHFERLEGI 578

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   AN I N  SR V M L+ +    P  G  T +D  ILS  +R++ E    ++   
Sbjct: 579 RN--FANKIWN-ASRFVLMNLEGFAIHQPW-GELTLADRWILSRYNRLIGETTAALERYD 634

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDRAS---TVLYVTVEVIRQLAILL 462
           +  A   +   +     D Y +  KP    K     D A+   T   V   V+R    LL
Sbjct: 635 LGEAARLLYEFLWNEYCDWYIELAKPRLYGKEVGVADAAASRQTAQQVLTYVLRGTLQLL 694

Query: 463 QAFVPKLANKIFDIL 477
             F+P L  +I+  L
Sbjct: 695 HPFMPFLTEEIWQQL 709



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT-----KV 71
           H+GHA +  + D+L+RF R+ G  VL+  GTD  G     K+ +A    G++      + 
Sbjct: 57  HLGHAMDNTLQDILSRFKRMQGYHVLWVPGTDHAGIATQAKVEEALAKEGLSKYDLGREA 116

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+++            +   R +    D + + F  T ++   +  + ++ ++ +KG IY
Sbjct: 117 FLERVWDWKHQYGTRITTQLRTLGTSCDWTRERF--TMDEGCSEAVQEVFIRLYEKGLIY 174

Query: 121 KG 122
           +G
Sbjct: 175 RG 176


>gi|20807263|ref|NP_622434.1| valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81482270|sp|Q8RBN5|SYV_THETN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|20515771|gb|AAM24038.1| Valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 879

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 47/323 (14%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP------------ 224
           ER  ++ +     +KD  +SR+ + WG +IP              +DP            
Sbjct: 386 ERFEKIYTNWLENIKDWCISRQLW-WGHRIPAWYCEDCGHVTVSREDPVKCEVCGSTNIH 444

Query: 225 --QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
             + ++  W  +     +T G+ +  +  K  F+P D+ V G DI+ F    W A ++  
Sbjct: 445 QDENVLDTWFSSALWPFSTMGWPEETEDLKY-FYPTDVLVTGYDIIFF----WVARMIFM 499

Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L   K+     V  HG +    G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G
Sbjct: 500 SLEFMKEIPFKYVLIHGLVRDALGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPG 559

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  +  + ++   N   AN + N  SR V + L + D  +        +D+ IL+  + 
Sbjct: 560 NDMRFSWEKVEHSRN--FANKLWN-ASRYVLLNLDENDTNLYLDN-LALADKWILTRYNN 615

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++EI +N++   +  A +++   V SE  D Y +  KP  L   N +       V   V
Sbjct: 616 IVKEITDNLEKFELGVAASKLYDFVWSEFCDWYIELSKP-VLYSDNEEAKKVTKSVLRYV 674

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F+P +  +I+  L
Sbjct: 675 LDNTLRLLHPFMPFITEEIWQNL 697



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 27/142 (19%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QK 57
           EK   +  I  PN   + H+GHA +  + D+L R+ R+ G   L+  GTD        + 
Sbjct: 34  EKKPFTIVIPPPNVTGELHMGHALDNTLQDILIRWRRMQGYAALWIPGTDHASIATEIKV 93

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC----------- 106
           + K  +  G T K   D     F + A      Y++ I +  K+   +C           
Sbjct: 94  LDKIREETGKTKK---DLTREEFLEKAWEWKDKYENRILSQLKKLGSSCDWTRTAFTMDE 150

Query: 107 ------RILWKKISDKGDIYKG 122
                 R ++  + +KG IYKG
Sbjct: 151 KRSKAVREVFVSLYEKGLIYKG 172


>gi|110802251|ref|YP_699196.1| valyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110682752|gb|ABG86122.1| valine--tRNA ligase [Clostridium perfringens SM101]
          Length = 880

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 24/269 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++E+ ENM+   +  AL +V   +     D Y +  KP  L   +      V  V   V
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTV 677

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +     LL   +P +  +I+  L    E+
Sbjct: 678 LNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|229062152|ref|ZP_04199476.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717135|gb|EEL68811.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 867

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       KF+  D
Sbjct: 408 WYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
          +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G
Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 85


>gi|294784860|ref|ZP_06750148.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486574|gb|EFG33936.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 859

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++    D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|296111094|ref|YP_003621475.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832625|gb|ADG40506.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 894

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 28/265 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ +N     A+++P +  V G DI+ F    W A ++  
Sbjct: 456 DPD-VLDTWFSSALWPFSTMGWPENQTDDFARYYPTNTLVTGYDIIFF----WVARMMFQ 510

Query: 281 ----SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   P  K V  HG I   +G K+SKSLGN +DP++VIE+ G DALR+FL      
Sbjct: 511 GKEFTGQRPF-KNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGSTP 569

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394
           G+D  +  D +    N    N I N  SR V M L  D    +P     +  D+ ILS  
Sbjct: 570 GQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLDDDTPSTLPDVDKLSLGDKWILSRL 626

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STVLY 449
           ++ +  +  N        A  ++ + +     D Y +  K  E      D+A    T+ Y
Sbjct: 627 NKTIAHVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGRGDKAPVQQTLAY 684

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V  + +R    LLQ  +P +   I+
Sbjct: 685 VLDQTLR----LLQPIMPFVTEAIW 705



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71
           H+GHA++  + D++ R  ++ GLDVL+  G D  G     K+ +  ++ GV+      + 
Sbjct: 59  HLGHAWDTTLQDMIIRQKKMQGLDVLWLPGMDHAGIATQAKVEQRLRSEGVSRYDLGREK 118

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FV+Q             + +  M   LD   + F  T +   +     ++  + +KG IY
Sbjct: 119 FVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERF--TLDDGLNKAVNKVFIDLYNKGLIY 176

Query: 121 KGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +G Y   W      A  + + +Y+   G +Y+ Q+
Sbjct: 177 RGEYIINWDPQARTALSDIEVIYQDDPGAFYHVQY 211


>gi|229013673|ref|ZP_04170802.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135303|ref|ZP_04264098.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648172|gb|EEL04212.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747595|gb|EEL97469.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 867

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       KF+  D
Sbjct: 408 WYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
          +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G
Sbjct: 29 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 85


>gi|163942206|ref|YP_001647090.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864403|gb|ABY45462.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 881

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       KF+  D
Sbjct: 422 WYHKETGEVYVGTEAPADFENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
          +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G
Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 99


>gi|168208620|ref|ZP_02634245.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170713145|gb|EDT25327.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 880

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453
           +++E+ ENM+   +  AL +V   +     D Y +  KP  +   + ++A  V++ V   
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+     LL   +P +  +I+  L    E+
Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|169343619|ref|ZP_02864618.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298179|gb|EDS80269.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 880

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453
           +++E+ ENM+   +  AL +V   +     D Y +  KP  +   + ++A  V++ V   
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+     LL   +P +  +I+  L    E+
Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|254302086|ref|ZP_04969444.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322278|gb|EDK87528.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 859

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++    D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|256846013|ref|ZP_05551471.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719572|gb|EEU33127.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 859

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  +I K  D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELIKKSNDKI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|19704849|ref|NP_602344.1| leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|32171570|sp|Q8RIQ3|SYL_FUSNN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19712730|gb|AAL93643.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 859

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++    D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|110801210|ref|YP_696599.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675857|gb|ABG84844.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 880

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453
           +++E+ ENM+   +  AL +V   +     D Y +  KP  +   + ++A  V++ V   
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+     LL   +P +  +I+  L    E+
Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|332159141|ref|YP_004424420.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034604|gb|AEC52416.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 1067

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 160/334 (47%), Gaps = 17/334 (5%)

Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           W  E+G  + + ++++  +L    E + E I   E  NE +  ++  L    L R   D 
Sbjct: 474 WQSEDGEIYVVGSWKELVELAVAIEVNGERIELPEDYNEKLRVIEEKLGPEDLHRPYVDA 533

Query: 216 WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRF 270
           + IK+          ++ VW D+      + GY  N +  + K WPAD  V G+D + ++
Sbjct: 534 FIIKVNGKEMRRVKDVVDVWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKW 592

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                 A +++ +    ++V  HG++L  KG+K+SKSLGN+I P EV+E+ G D  R+++
Sbjct: 593 FYSQQAASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYM 652

Query: 330 VREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           +      ++  +   G+++ R   ++   +  L S  +S+   +   + P    F E D+
Sbjct: 653 LWATNPWENLRFSWKGIEQVRRMLNILWNVYVLASTYMSLDNFNPRKLKPEKLPFREEDK 712

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRA 444
            ILS  + ++ ++   ++   + +A   +   V E + R++     ++ W ++  +PD+ 
Sbjct: 713 WILSRVNSLIGKVENGIETFYLTKATRALYDFVVEDLSRWYVRLIRKRLW-VEGEDPDKL 771

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   Y   +V   L  LL  F P +A +I+  L 
Sbjct: 772 AA-YYTLWKVFDVLTRLLAPFTPYIAEEIYQNLI 804



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVKVEQA 100

Query: 65  AGVTTKVFVDQN 76
            G+ TK  +++ 
Sbjct: 101 LGLKTKKEIEEK 112


>gi|254172065|ref|ZP_04878741.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033961|gb|EEB74787.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 1066

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 162/334 (48%), Gaps = 25/334 (7%)

Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           W  E+G  + + ++++  KL    E + E +   E  NE +  ++  L    L R   D 
Sbjct: 474 WQAEDGEIYVVGSFEELVKLAVAIEVNGERVELPEDYNEKLRVIEEKLGPEDLHRPYVDA 533

Query: 217 GIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKD-IL 268
            I   +  +      ++ VW D+    + +   LD P   +   K WPAD  V G+D + 
Sbjct: 534 FIIKVNGKEMKRVRDVVDVWFDS---GIASWASLDYPRNKELFEKLWPADFIVEGEDQVT 590

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           ++      A +++ +    + V  HG++L  KG+K+SKSLGN+I P EV+++ G D  R+
Sbjct: 591 KWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRF 650

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFT 384
           +++      ++  +   GL++     + N + N+   S + M L ++D   + P    F 
Sbjct: 651 YMLWATNPWENLRFSWKGLEQ--VKRMLNILWNVYVLSATYMSLDNFDPTKLKPEELPFR 708

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTN 440
           E D  ILS  + +++++ E ++   + +A   + + V E + R++     ++ W ++  +
Sbjct: 709 EEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYNFVVEDLSRWYVRLIRKRMW-VEGDD 767

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           PD+ ++  Y   +V   L  L+  F P +A +I+
Sbjct: 768 PDKLAS-YYTVWKVFDVLLRLMAPFTPYIAEEIY 800



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---------WKKISD 115
            G+ TK  ++             +I  D+FI+  ++   +  +I+         W    +
Sbjct: 101 LGLKTKKDIET------------EIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDN 148

Query: 116 KGDIYKGCY--SGWYSLR 131
                K  Y  SGW++L+
Sbjct: 149 PYMTIKNEYIESGWFTLK 166


>gi|227903677|ref|ZP_04021482.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868564|gb|EEJ75985.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 879

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +S  +     ER  + ++     + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D  +    +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDNPDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L +  
Sbjct: 534 DVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD+ I    +  + E+
Sbjct: 591 KPAHMPDTSKFDLSDKWIFDRLNHTIGEV 619



 Score = 43.9 bits (102), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R++G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  +   LD S + F  T +K      +
Sbjct: 99  KQGKDRHEMGREAFVKQVWDWKDEYANIIKSQWSKLGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W    + A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPTLETALSDIEVIHKDDKGAFYHVKY 204


>gi|168215545|ref|ZP_02641170.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182624398|ref|ZP_02952182.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910401|gb|EDT72778.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182382320|gb|EDT79799.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 880

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D  +  F+P    V G DI+ F    W A ++ + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDRTDDLEF-FYPTSTLVTGYDIIFF----WVARMIFSGIHN 504

Query: 285 ----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P    V  HG I   +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D 
Sbjct: 505 MGETPF-DTVLIHGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDI 563

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
            Y    + +RV A  + AN I N  SR V M L ++          ++ +D+ ILS  + 
Sbjct: 564 RY----IPERVEAARNFANKIWN-ASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNS 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVE 453
           +++E+ ENM+   +  AL +V   +     D Y +  KP  +   + ++A  V++ V   
Sbjct: 619 LIKEVTENMEKYELGIALQKVHDFLWTEFCDYYIELVKP--VLYGDDEKAKGVVFNVLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+     LL   +P +  +I+  L    E+
Sbjct: 677 VLNTGLKLLHPVMPFITEEIYTHLSTETES 706


>gi|160878630|ref|YP_001557598.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427296|gb|ABX40859.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 892

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 23/238 (9%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +      P  K V  HG +   +G K+SKSLGN I
Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMIFSGYEQMNEKPF-KTVLFHGLVRDSQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+E+IE+ G DALR+ L+   A G D  FY      +RV A  + AN + N  SR + M
Sbjct: 534 DPLEIIEQYGADALRFMLITGNATGNDMRFY-----MERVEAARNFANKVWN-ASRFIMM 587

Query: 369 ILKDYD--GMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            ++  +  GM            T++D+ I+S  + + +++ E+++   +  A  +V   +
Sbjct: 588 NMQQMEEAGMDAKVDSVDMSTLTDADKWIISKVNTLTKDVTEHLEKFDLGIAAQKVYDFI 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            E   D Y +  KP  L   +    +  +Y    V+     LL  ++P +  +IF  L
Sbjct: 648 WEEFCDWYIEMVKP-RLYGDDQATKTAAIYTLRTVLDSALKLLHPYMPFITEEIFCTL 704



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++ K   +  I  PN   Q H+GHA +  + D+L RF R+ G + L+  GTD        
Sbjct: 33  DKTKKPFTIVIPPPNITGQLHMGHALDNTMQDILIRFKRMQGFNALWQPGTDHASIATEV 92

Query: 57  KIAKAAQNAGV 67
           KI +A +  G+
Sbjct: 93  KIIEALKKEGI 103


>gi|257462510|ref|ZP_05626922.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060166|ref|ZP_07924651.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685842|gb|EFS22677.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 852

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     +   N  N +    +L  SY  D  I +    ++   + ++KK+ +KG +YK
Sbjct: 92  QNGAHPATWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG+ +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGKCWRHSKTTVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 ELRGGWPEKVLTMQK 223



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 101/195 (51%), Gaps = 30/195 (15%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K EK+SKS  N +DP E+I + G D  R F++      K+  ++++GL         
Sbjct: 605 LLVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAAPPEKELEWNENGLA-------- 656

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEIRENMQNQL-IH 411
            G    ++R   ++L++   +      +T   +SD++++   ++ ++++ E+++N    +
Sbjct: 657 -GAYRFLTRVWRLVLENQTHISLEKIDYTTISKSDKALIIKLNQTIKKVTESIENDYHFN 715

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            ++A ++ L++E+  Y          K++  + + VL    E ++Q+ I+L  FVP    
Sbjct: 716 TSIAAIMELLNEIQAY----------KSDSTQYTRVL---GEALKQIVIMLSPFVPHFCE 762

Query: 472 KIFDIL----FVADE 482
           ++++ +    +V+D+
Sbjct: 763 ELWESIGETGYVSDQ 777


>gi|317473020|ref|ZP_07932321.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899503|gb|EFV21516.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 756

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 167/400 (41%), Gaps = 79/400 (19%)

Query: 137 NDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--H 183
           NDD       G+Y     Y A+   V+ +EE+GY  ++  ++      D+  +  E    
Sbjct: 299 NDDATINENGGRYEGMERYEARKAIVKDLEEQGYLVKIKEHEHNVGTHDRCKATIEPMVK 358

Query: 184 PEFILPI-ERRNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP-- 221
           P++ + + E     I  VK+G                   ++D  +SR+ + WG +IP  
Sbjct: 359 PQWFVKMDELAKPAIEAVKNGDIKFVPERYTKTYLHWLENIRDWCISRQLW-WGHRIPAY 417

Query: 222 ------------DDPQYI--------------MYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                       + P+                +  W  +     +T G+ +  +     F
Sbjct: 418 YCDECGETVVAKEKPEVCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEQTE-ELDYF 476

Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +P ++ V G DI+ F  +   +  +  +   P    V  HG +   KG K+SKSLGN ID
Sbjct: 477 YPTNVLVTGYDIIFFWVVRMVFSGYEHTGKAPF-DTVLIHGLVRDDKGRKMSKSLGNGID 535

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369
           P+EVI + G DALR+ LV   A G D  FY      +RV A  + AN + N  SR + M 
Sbjct: 536 PLEVISQYGADALRFTLVTGNAPGNDMRFY-----MERVEASRNFANKVWN-ASRFMMMN 589

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            +  D         T +D  ILS  + + +++ +NM    +  A+ ++   + E   D Y
Sbjct: 590 FEQADFSHVELSDLTSADRWILSKFNTLAKDVTDNMDKYELGIAVQKLNDFIWEEFCDWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            +  KP  L     +  +  L+   +V+ +   LL  F+P
Sbjct: 650 IEMVKP-RLYNDEDNTKAAALWTLKKVLSESLKLLHPFMP 688


>gi|323147774|gb|ADX33166.1| MetG [Vibrio vulnificus]
 gi|323147780|gb|ADX33169.1| MetG [Vibrio vulnificus]
 gi|323147814|gb|ADX33186.1| MetG [Vibrio vulnificus]
 gi|323147816|gb|ADX33187.1| MetG [Vibrio vulnificus]
 gi|323147822|gb|ADX33190.1| MetG [Vibrio vulnificus]
 gi|323147828|gb|ADX33193.1| MetG [Vibrio vulnificus]
 gi|323147832|gb|ADX33195.1| MetG [Vibrio vulnificus]
          Length = 143

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-- 259
           L+   +SR    +G +IP +     YVW+DA   Y+ +   L +   D    ++W     
Sbjct: 1   LQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKHSK 60

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FH+++WPA L  +    P  VF HG++   G K+SKS G  +     
Sbjct: 61  TELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTY 120

Query: 317 IEEVGVDALRYFLVREI 333
           +E +  + LRY+   ++
Sbjct: 121 LEHLDPECLRYYYAAKL 137


>gi|296328927|ref|ZP_06871435.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153916|gb|EFG94726.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 859

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEILDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++    D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELVKNANDKI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVSSS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|219850836|ref|YP_002465268.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545095|gb|ACL15545.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 1060

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 55/297 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I  VW D+      T  +    D    + WPADL + G+D  R  F++    +       
Sbjct: 516 IFDVWFDSAVASWATLDFPAEHDQFD-RLWPADLIIEGQDQTRGWFYSQLGASTCAFDKA 574

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K+V  HGF L    +K+SKSLGN+I P EV+ + GVD LR++++   A   D  ++ 
Sbjct: 575 PY-KRVLMHGFALDADSKKMSKSLGNMITPEEVVAKYGVDVLRFYVLSANAPWDDLKFNW 633

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTP-------------- 380
           DG+K              V R+++++   Y         DG +P                
Sbjct: 634 DGVKT-------------VHRTINVLWNVYRFPLTYMSLDGFVPESNEEIWNGEYITRRY 680

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKT 439
            A    D  I+S  + +   + + M    +HRA   ++S + E + R++       +   
Sbjct: 681 AAMPSEDRWIISTVNSLAVTVTQAMNECTLHRATRAILSFILEDLSRWYVQLVRPRMWLE 740

Query: 440 NPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             D+     Y T+  V+R+L +L+  F P +A              C+Q+L Q+  P
Sbjct: 741 GEDQGKQDAYETMYYVMRKLLVLIAPFAPHIAET------------CYQNLKQQGDP 785



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFV 73
           Y     H+G A+  II D L RFHR+ G +V+   G D HG  I  +  +  G  +K  +
Sbjct: 49  YTTGHIHLGTAWNKIIKDSLLRFHRMTGRNVIARAGYDMHGLPIEVQVEKKLGFVSKKDI 108

Query: 74  DQ 75
           +Q
Sbjct: 109 EQ 110


>gi|170759549|ref|YP_001788482.1| valyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406538|gb|ACA54949.1| valine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 881

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|326942237|gb|AEA18133.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 881

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  ++    +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSVLWPFSTLGWPNEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|153940722|ref|YP_001392440.1| valyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152936618|gb|ABS42116.1| valine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320426|gb|ADG00804.1| valine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 881

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|53804495|ref|YP_113910.1| leucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|60390675|sp|Q608N7|SYL_METCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53758256|gb|AAU92547.1| leucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 887

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GVT   + D N+   R     L ++  +D  I T +  ++   + L+ ++ +KG IYK
Sbjct: 92  QNGVTPAAWTDANADYMRKQLKSLGLAVDWDREIATCKPEYYRWEQWLFTRLFEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D+    +++V  G     G     +  P+       YF R++AY ++LL+
Sbjct: 152 KTAPVNWDPVDQTVLANEQVIDGRGWRSGALVEKRDIPM-------YFMRITAYAEELLA 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 ELDDLP 210


>gi|322807474|emb|CBZ05048.1| valyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 881

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|226950593|ref|YP_002805684.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841749|gb|ACO84415.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 881

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLNKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|148381112|ref|YP_001255653.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153934142|ref|YP_001385486.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935830|ref|YP_001388892.1| valyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290596|emb|CAL84725.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152930186|gb|ABS35686.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931744|gb|ABS37243.1| valine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 881

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|170755423|ref|YP_001782798.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120635|gb|ACA44471.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 881

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|328948525|ref|YP_004365862.1| valyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448849|gb|AEB14565.1| Valyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 912

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 165/394 (41%), Gaps = 51/394 (12%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L++   Y  +E  K + G  Y        ++ ++ +F ++    DK L+ +++  EF+  
Sbjct: 344 LKELGLYKGEEKIKHSVGHCYRCSTVVEPYLSDQ-WFVKMKPLADKALAAWKNE-EFVFY 401

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQYIMYVWIDA-- 234
             +     +     ++D  +SR+ + WG +IP             +DP        DA  
Sbjct: 402 PRKWENTFTHWMENIRDWCISRQLW-WGHRIPVWYCECGETIVSREDPVKCPKCGADASH 460

Query: 235 -----------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                       +++L     L  P+ +     F+P    V   DI+ F    W + ++ 
Sbjct: 461 LKQDPDVLDTWFSSWLWPFSTLGWPEKTSDLEHFYPTTAIVTAYDIIFF----WVSRMIM 516

Query: 282 ANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    K     ++ HG +  K G K+SKSLGN IDP+E+I+  G DAL++ L    A 
Sbjct: 517 AGLEFTGKSPFHDIYIHGLVRDKQGRKMSKSLGNGIDPLEIIDLYGADALKFTLSYMCAQ 576

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVC 394
           G+D   DKD  K  + +   N + N  SR +   L+D   +IP   +   E D+ I +  
Sbjct: 577 GQDVLVDKDSFK--MGSRFCNKVWN-ASRYILGNLEDRT-LIPVADSDLNELDKWIYTCL 632

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              ++  R   ++   +   + +         D Y +A K    K  +       + V +
Sbjct: 633 DNAVKNARAAFESYRYNDGASAIYEYFWNDFCDWYVEATK-LSFKNGDDHEKDRAVSVLL 691

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENR 484
            V+ +   LL  ++P +  +I+  L +A   ENR
Sbjct: 692 NVLEESLRLLHPYIPFVTEEIYSKLPLAQIVENR 725



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 25/165 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------Q 56
           +  I  PN     H+GH     + D++ R+HR+ G D L+  GTD  G           +
Sbjct: 56  TVVIPPPNVTGVLHMGHGLNNTLQDIVVRYHRMKGDDTLWIPGTDHAGIATQNVVEKQLK 115

Query: 57  KIAKAAQNAG------VTTKVFVDQNS---RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           K  K   + G       T KV  D ++   +  R + + +D + + F  T ++      R
Sbjct: 116 KEGKTRNDLGREKFLERTWKVKEDHHNTIVKQQRKLGNSVDWNRERF--TMDEGLSKAVR 173

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++  + ++G IYKG Y   +  R      DDEV +   DG  Y+
Sbjct: 174 NVFVTLYERGLIYKGHYLVNWCPRCGTALADDEVEHTDTDGFMYH 218


>gi|168179187|ref|ZP_02613851.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670164|gb|EDT82140.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 881

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTPDLKY-FYPNNTLVTGYDIIFF----WVARMVFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P   V  HG +   +G+K+SKSLGN +DPIEVI+E G DALR+ LV   A G D  
Sbjct: 506 MDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDPIEVIDEYGADALRFTLVTGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M L KD          +T +D+ ILS  + V
Sbjct: 566 Y----YPERVEAARNFANKIWN-ASRFVLMNLDKDLMDKYKDNKNYTIADKWILSRLNTV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           ++E+ EN++   +  A  ++   +     D Y +  KP  +   + +   A  VL+  +E
Sbjct: 621 VKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELVKPVLYGEDEQSKGIAFNVLHKVLE 680

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Q   LL   +P +  +I+  L+   E+
Sbjct: 681 TSLQ---LLHPIMPFITEEIYTHLYTEYES 707


>gi|307243608|ref|ZP_07525751.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492977|gb|EFM64987.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 883

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 24/265 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ D  D     ++P  + V G DI+ F  +       SA   +
Sbjct: 450 VLDTWFSSGLWPFETMGWPDQTDMLDY-YYPTSVLVTGYDIIFFWVV---RMAFSAMFCM 505

Query: 287 PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GF 340
            +K F H  I       +G K+SKSLGN IDP+E+I++ G DALR+ L    + G D  F
Sbjct: 506 NEKPFEHVLIHGLVRDSEGRKMSKSLGNGIDPLEIIDQYGADALRFTLTTGNSPGNDMRF 565

Query: 341 Y-DKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMI--PTPGAFTESDESILSVC 394
           Y ++    +  N  L N      SR V M L+D    D +         T +D+ I+S  
Sbjct: 566 YMERVEFARNFNNKLWNA-----SRFVFMNLEDESLLDNLTRESVEANLTLADKWIISRA 620

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +R+++E+  NM    +  AL +      SE  D Y +  KP  L   + +     LY   
Sbjct: 621 NRLVKEVNYNMDQFDLGIALQKAYDFTWSEYCDWYIEIVKP-RLYGDDREAKRAALYTLT 679

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+ ++  LL  F+P +  +I+  L
Sbjct: 680 YVLEKILKLLHPFIPFITEEIYSYL 704



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          ++ K   S  +  PN   Q H+GHA +  + D+L R+ R+DG + L+  GTD
Sbjct: 33 DKTKKSFSIVMPPPNITGQLHMGHALDDTLQDILTRWKRMDGYEALWIPGTD 84


>gi|34763278|ref|ZP_00144237.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887049|gb|EAA24161.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 862

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 95  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 155 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYVDELLEGHE 211

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 212 EIKDGWPEKVLTMQK 226



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 611 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 668

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++    D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 669 WRLVFENSELVKNANDEI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 726

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 727 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 776


>gi|78044410|ref|YP_359197.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|90103530|sp|Q3AF87|SYV_CARHZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77996525|gb|ABB15424.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 878

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 29/272 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP  ++  W  +     +T G+  N +  K  ++P  + V G+DI+ F    W A 
Sbjct: 441 KVHQDPD-VLDTWFSSALWPFSTLGWPQNTEELKY-YYPTSVLVTGRDIIFF----WVAR 494

Query: 279 LLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +L   L     +P K+V  HG +L  +G K+SKSLGN +DP+EVI   G D+LR+ LV  
Sbjct: 495 MLFMGLEFMKEVPFKEVLIHGLVLDAQGRKMSKSLGNGVDPVEVIASHGADSLRFMLVTG 554

Query: 333 IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              G D    F   DG +     + AN + N  SR V M L+ +          T +D  
Sbjct: 555 NTPGNDLRFHFERLDGAR-----NFANKLWN-ASRFVLMNLEGFTPQGIKQEELTLADRW 608

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP--DRAS 445
           IL+  + V+  +   +    +  A  ++   + +   D Y +  KP  L    P  D A 
Sbjct: 609 ILARLNAVIDRVTAFLDEYELGEAARELYEFIWDEFCDWYVELTKP-RLYGKMPGGDTAR 667

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            VLY    V++    LL  F+P +  +I+  L
Sbjct: 668 EVLYA---VLKTTLELLHPFMPFITEEIWQRL 696



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 11/76 (14%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ERE   I         Q H+GHA +  + D+LAR+ R+ G + L+  GTD          
Sbjct: 34 EREPFCIVMPPPNVTGQLHMGHALDNTMQDILARYKRMQGFNTLWLPGTD---------- 83

Query: 63 QNAGVTTKVFVDQNSR 78
           +AG+ T+  V++  R
Sbjct: 84 -HAGIATQAKVEEELR 98


>gi|237742619|ref|ZP_04573100.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430267|gb|EEO40479.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 859

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYVDELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++    D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELVKNANDEI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|229098932|ref|ZP_04229867.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229117961|ref|ZP_04247321.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665410|gb|EEL20892.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684430|gb|EEL38373.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 867

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       KF+  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAVDFKKFYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|257066730|ref|YP_003152986.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798610|gb|ACV29265.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 879

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 161/359 (44%), Gaps = 53/359 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++  +    +  Y+     ++P       ++++ + ++D ++SR+ + WG ++P   
Sbjct: 357 WFVKMDEFAKMCIDAYDKGEVKLIPDSLSKTYMNWL-NNIRDWTISRQLW-WGHRLPVFY 414

Query: 222 -DDPQYIMY-----------------------VWIDALTNYLTTTGYLDNPDGSKA--KF 255
            DD + I+                         W  +      T G+   PD ++    F
Sbjct: 415 TDDGEIIVSEDEPDENGMLNGVHVTQDEDTLDTWFSSALWPFATLGW---PDENEELDYF 471

Query: 256 WPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D+ V G DI+ F  I   + +   +  +P    +F+      +G K+SKSLGN +DP
Sbjct: 472 FPTDILVTGYDIIFFWVIRMIFSSIYNTGKVPFHHVLFTGLIRDPQGRKMSKSLGNGVDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILK 371
           I+V+ E G DALR+ L+   + G D  YD    +KR+ A  + AN + N  SR V M ++
Sbjct: 532 IDVVNEYGADALRFTLITGNSPGNDMRYD----EKRILASRNFANKLWN-ASRFVLMNIE 586

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429
           + D +          D+ IL   + V+ ++ +N+    I  A  ++   +     D Y +
Sbjct: 587 EGDDLDFKGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRIEDFIWNEYCDWYIE 646

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-------DILFVAD 481
             K   L   + +  + V  V + V++ + +LL  F+P +  +I+       D+L V D
Sbjct: 647 FAKI-RLYGDDKEAKANVKKVLLYVLKNMLVLLHPFMPFITEEIYSSLPNKKDLLIVED 704



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 22/142 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           H+GHA    I D++ R+ R+ G + L+  GTD        K+     + G T        
Sbjct: 49  HLGHALNNTIQDIIIRYKRMAGFEALWIPGTDHASISTESKVVDKIYSEGKTKADLGREG 108

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   T  +  +     R +    D  +D F  T ++      + ++KK+ D G IY
Sbjct: 109 FLEEAWDWTNKYGGRIKEQLRTIGVSCDWDHDSF--TMDENLTKAVKRVFKKMYDDGLIY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVY 142
           +G     +  + E   +D EVY
Sbjct: 167 RGNRIVNWDPKAETAISDAEVY 188


>gi|170077832|ref|YP_001734470.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169885501|gb|ACA99214.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 912

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 28/283 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ DN +  + K++P  + V G DI+ F    W A 
Sbjct: 459 QLEQDPD-VLDTWFSSGLWPFSTLGWPDNSEDFQ-KYFPNSVLVTGFDIIFF----WVAR 512

Query: 279 L------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +       +  +P  K V+ HG +    G+K+SKS  N IDP+ + +  G DALRY L+R
Sbjct: 513 MTMMSSHFTGKIPF-KDVYIHGLVRDENGKKMSKSANNGIDPLLMCDRYGTDALRYTLIR 571

Query: 332 EIA-CGKDGF--YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGA-- 382
           E+A  G+D    YD+   + + + + +    N +  +   ++ + DG  PT    P    
Sbjct: 572 EVAGAGQDISLQYDRKTDESQ-SVEASRNFANKLWNAARFVMMNLDGKTPTDLGRPAMAD 630

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440
               D  ILS   +V+ +  +N++   +  A   +   +     D Y +  KP    K  
Sbjct: 631 LELGDRWILSRLHQVIADTHKNLEGYGLGEAAKALYEFIWGDFCDWYIELVKPRLYAKEA 690

Query: 441 PDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            D+AS  +   +   V+  +  LL  F+P +  +I+  L  AD
Sbjct: 691 QDQASRTVAQQILAWVLEDILKLLHPFMPHITEEIWQTLTQAD 733


>gi|46200127|ref|YP_005794.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|31615792|pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Pre-Transfer Editing Substrate Analogue In Both
           Synthetic Active Site And Editing Site
 gi|313507210|pdb|2BTE|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507211|pdb|2BTE|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507217|pdb|2BYT|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|313507218|pdb|2BYT|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|46197755|gb|AAS82167.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 878

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K +   N R  ++   ++ I Y  D  + T E  ++   + ++ K+ +KG  Y+
Sbjct: 92  KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E
Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208

Query: 182 --SHPEFILPIER 192
             + PE +  ++R
Sbjct: 209 GLNWPEKVKAMQR 221


>gi|157878078|pdb|1H3N|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate
          Length = 820

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K +   N R  ++   ++ I Y  D  + T E  ++   + ++ K+ +KG  Y+
Sbjct: 92  KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E
Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208

Query: 182 --SHPEFILPIER 192
             + PE +  ++R
Sbjct: 209 GLNWPEKVKAMQR 221


>gi|295695330|ref|YP_003588568.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410932|gb|ADG05424.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 890

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 159/386 (41%), Gaps = 50/386 (12%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +LR E Y    E ++ A G      H  V+    E +F ++    +  +   ++     +
Sbjct: 335 ALRREGYLERVEPHRHAVGHCQRC-HTVVEPFLSEQWFVKMKPLAEPAIEAVKAGRVRFV 393

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY-------- 226
           P ER  ++       ++D  +SR+ + WG +IP              +DP++        
Sbjct: 394 P-ERFEKLYLHWVDNVRDWCISRQLW-WGHRIPAWYCEGCGETIVAAEDPEHCPRCGSRQ 451

Query: 227 ------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
                 ++  W  +     +T G+ +  +  + +++P D+ V G DI+ F    W A ++
Sbjct: 452 LRQEEDVLDTWFSSALWPFSTMGWPEETEDLR-RYFPTDVLVTGFDIIYF----WVARMI 506

Query: 281 SANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +L    +V  H   +H      +G K+SKSLGN IDP++V+ + G DALR+ L    A
Sbjct: 507 FMSLAFTGEVPFHTVYIHGLVRDSQGRKMSKSLGNGIDPLDVVNKYGADALRFMLASGTA 566

Query: 335 CGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            G D  FY +     R     AN I N     +  + K+  G +         +  IL  
Sbjct: 567 PGNDQRFYWEKVESAR---HFANKIWNAARFVLLNVDKEVGGDLKG-AVLGRPEHWILHR 622

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  ++++ E ++N     A       V     D Y +  K   L   NP  A     V 
Sbjct: 623 LNETVRDVTEALENFDFGGAAKVAYDFVWGEFCDWYIEFSKA-ALYGENPLAARGTRQVL 681

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           V V+ +   LL  F+P L  +I+  L
Sbjct: 682 VHVLDRALRLLHPFMPFLTEEIWQKL 707



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA +  + D+L RF R+ G D L+  GTD  G
Sbjct: 61 HMGHALDFTLQDILIRFRRMQGRDALWLPGTDHAG 95


>gi|291521943|emb|CBK80236.1| valyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 883

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 115/232 (49%), Gaps = 19/232 (8%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +  +   P    V  HG +   +G K+SKSLGN I
Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMVFSGYEQTGKAPF-HTVLIHGLVRDSQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + N  SR + M  +
Sbjct: 534 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFMLMNFE 590

Query: 372 -------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                    DG+  +    T++D+ ILS  +R+ +++ EN+    +  A++++   + E 
Sbjct: 591 QAAEKGISIDGV--SLADLTQADKWILSKMNRLTKDVTENIDKYELGIAVSKIYDFIWEE 648

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             D Y +  KP      +  +A+ +  +   +I  L  LL  ++P +  +IF
Sbjct: 649 FCDWYIEMVKPRLYNDEDKTKAAALWTLKTVLINALK-LLHPYMPFITEEIF 699


>gi|157884158|pdb|2V0G|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site.
 gi|157884159|pdb|2V0G|D Chain D, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site
          Length = 877

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K +   N R  ++   ++ I Y  D  + T E  ++   + ++ K+ +KG  Y+
Sbjct: 92  KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E
Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208

Query: 182 --SHPEFILPIER 192
             + PE +  ++R
Sbjct: 209 GLNWPEKVKAMQR 221


>gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 757

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 48/306 (15%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDP---------QYIMYVWIDALTNYL 239
            ++D  +SR+ + WG +IP              +DP         + ++  W  +     
Sbjct: 399 NIEDWCISRQLW-WGHRIPAWTNKETGEMYIGMEDPKDKENWIQDEDVLDTWFSSALWPF 457

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSH 293
           +T G+ ++ D   A+++P D+ V G DI+ F    W A +         N P  K V  H
Sbjct: 458 STLGWPESTD-DLARYFPNDVLVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLIH 511

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +   +G K+SKSLGN IDP++VIE  G DALR+FL      G D  +D+  ++   N 
Sbjct: 512 GLVRDSQGRKMSKSLGNGIDPMDVIENHGADALRFFLTTNSTPGLDLRFDEKKMESSWN- 570

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              N I N  +R V M + D    +      +  D+ ILS    VL  +  NM+      
Sbjct: 571 -FINKIWN-AARYVQMQIGDTKPTLDV-DCLSSVDKWILSRMDEVLNHVSMNMEKYEFAM 627

Query: 413 ALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              ++ S +       Y +  K   +   +        VLY  +E I +   +L  F+P 
Sbjct: 628 IGNELYSFIWNDFCSWYIELSKATLYSEDQAVVQNTKAVLYTVLEAILK---MLSPFMPF 684

Query: 469 LANKIF 474
           +  +I+
Sbjct: 685 VTEEIY 690



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 18/108 (16%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN   + H+GHA++  + D+L R+ RL G DVL+ +G D           +AG+ T
Sbjct: 41  VIPPPNVTGKLHLGHAWDTTLQDILCRYKRLKGYDVLWVSGMD-----------HAGIAT 89

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFI-RTTE--KRHHDTCRILWKKIS 114
           +  VD+  +N  +     DI  + F+ R  E  + +  T R  W K+ 
Sbjct: 90  QAKVDERLKN--EGISRYDIGREKFLDRAWEWKEEYASTIRSQWAKLG 135


>gi|171849151|pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate In The
           Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3-
           Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The
           Editing Site
          Length = 878

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K +   N R  ++   ++ I Y  D  + T E  ++   + ++ K+ +KG  Y+
Sbjct: 92  KFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E
Sbjct: 152 AKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLE 208

Query: 182 --SHPEFILPIER 192
             + PE +  ++R
Sbjct: 209 GLNWPEKVKAMQR 221


>gi|229105097|ref|ZP_04235748.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678278|gb|EEL32504.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 867

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       KF+  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAIDFKKFYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|283769125|ref|ZP_06342030.1| valine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104311|gb|EFC05689.1| valine--tRNA ligase [Bulleidia extructa W1219]
          Length = 871

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 35/301 (11%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQYI---------MYVWIDALTNY 238
             ++D  +SR+ + WG +IP              + PQ I         +  W  +    
Sbjct: 398 ENIEDWCISRQLW-WGHRIPAWYHKDTKEIYVGQEAPQDIENWRQDEDVLDTWFSSALWP 456

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFI 296
            +T G+    +  K +++P  +   G DI+ F    + + A   +   P  K V  HG I
Sbjct: 457 FSTLGWPKETEDFK-RYYPNSMMGTGYDIIFFWVARMAFQARHFTGQAPF-KDVVLHGLI 514

Query: 297 LH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              KG K+SKSLGN IDP+EVI++ GVDALRYFL      G+D  Y  + ++   N    
Sbjct: 515 RDAKGRKMSKSLGNGIDPMEVIDQYGVDALRYFLTTNSTPGQDLRYIPEKVEAAWN--FI 572

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N  SR V M L+D         +    D  IL+  ++ ++++  NM       A +
Sbjct: 573 NKIWN-ASRFVLMNLEDTTDFRLENKSLNSIDRWILTKLNKTIEQVTLNMDKYEFGLAGS 631

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++   V +     Y +  K   L+  + +  +        V++ +  LL  ++P +  +I
Sbjct: 632 ELYGFVWDDFCSWYLELAKS-NLRSEHHEIQAATKATLAYVLKAVVCLLHPYMPFVTEEI 690

Query: 474 F 474
           +
Sbjct: 691 Y 691



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 18/117 (15%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ K   +  I  PN     HIGHA++  I D++AR+ R+ G DVL+  G D        
Sbjct: 32  DKHKEPFTIVIPPPNVTGILHIGHAFDTTIQDMIARYKRMQGYDVLYLPGMD-------- 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114
              +AG+ T+  V+  +R  +   +  D+  + F+      ++ +  T R  W K+ 
Sbjct: 84  ---HAGIATQAKVE--ARLKKQGLNRYDLGREKFLERAWAWKEEYAATIRSQWAKLG 135


>gi|296421294|ref|XP_002840200.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636414|emb|CAZ84391.1| unnamed protein product [Tuber melanosporum]
          Length = 817

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 28/299 (9%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           S++K+GLK   ++R    WG  +P  P Y   +MYVW DA   Y++ T    N      K
Sbjct: 429 SWLKTGLKPRCITRD-LTWGTPVPV-PGYEDKVMYVWFDACIGYVSITA---NYTKEWEK 483

Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLS---ANLPLPKKVFSHGFILHKGEKISKS 306
           +W     V     +GKD + FH + +P   +     N  +   + +  ++ ++G K SKS
Sbjct: 484 WWKNKDEVKLYQFMGKDNVPFHTVVFPGSEIGTREGNWTMLHHISTTEYLQYEGGKFSKS 543

Query: 307 LG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            G  V         V     RY+L+       D  +       + N++L   +GN V+R 
Sbjct: 544 RGVGVFGNNARDTGVPPSVWRYYLLSSRPETGDTQFVWQDFATKNNSELLANLGNFVNRL 603

Query: 366 VSMILKDYDGMIP--TPG----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +  I   Y G++P  T G    +F +  ES+    + +L+   E ++N  I   L + ++
Sbjct: 604 IKFINAKYAGVVPDYTIGINDISFGQYKESV----NALLKSYIEELENVHIRAGLERAMA 659

Query: 420 LVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  E +R+    K      TN P +A+ V+   + +I  L+ L+  ++P  +  I   L
Sbjct: 660 ISGEGNRFLQDNKLDNALFTNSPKKAAAVVGFGINLIYLLSALIYPYMPATSESIVKQL 718



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I+ A+ Y N  PH+G+    ++ AD  +R+ +    + L+  GTDE+G      A   
Sbjct: 236 VLITAALPYVNNVPHLGNIVGSVLSADAFSRYAKARNYNTLYICGTDEYGTATETKALEE 295

Query: 66  GVTTKVFVDQ 75
           G+T +   D+
Sbjct: 296 GITPRALCDK 305


>gi|302510571|ref|XP_003017237.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
 gi|291180808|gb|EFE36592.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
          Length = 975

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 39/280 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+   H+GH     I+DVLARF ++ G DVL   G D  G     AA 
Sbjct: 75  KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENAAI 134

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  QN  N R+    L I +  D  + T     +   + L+  + +KG  Y+
Sbjct: 135 ERGIHPEGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V          A+   V+  E + +FFR++A+++ LL    
Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251

Query: 178 SYYESHPEFILPIER------RNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMY 229
           S   S P+ IL ++R      R  ++ F       LS+  +T D  +    PD    + Y
Sbjct: 252 SLSGSWPDRILTMQRHWLGKSRGALVPFT------LSIPGETLDIEVFTTRPDTLHGVQY 305

Query: 230 VWID--------------ALTNYLTTTGYLDNPDGSKAKF 255
           + +                L  ++ +TG L  P  +KA F
Sbjct: 306 IALSTSHPVVKKMAANTPGLQEFINSTGSL--PPETKAGF 343



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 15/190 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351
           EK+SKS  N +DP   IE  G DA R  ++      +   +D+    G+++      +  
Sbjct: 673 EKMSKSKYNGVDPNTCIESYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 732

Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            D  N +      S    L   + M +P  G  +E++ ++L +    +  +   ++    
Sbjct: 733 EDTGNSLKRANFSSAPDALSSLNDMALPPLGKLSETESNLLLMTDNTISSVSYCLEKN-- 790

Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVP 467
              L  VIS L+   +       P E  KT+P   S T L+ T+ + +  L  +L    P
Sbjct: 791 QYGLNTVISDLIKLTNAIAAVPLPEESSKTSPSAQSVTPLHTTLYIALNSLLRMLAPIAP 850

Query: 468 KLANKIFDIL 477
             A++ +++L
Sbjct: 851 AFASECWEVL 860


>gi|269866172|ref|XP_002652181.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063007|gb|EED41875.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 320

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D     
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129

Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158
                          I   C  G  +  D+      Y+ D +  +  + +    +  P Q
Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
               +  FF L    ++L  Y+++          R    +++K  L    ++RK    WG
Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242

Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240
           + +P    DD   + YVW DA   YL+
Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267


>gi|146293957|ref|YP_001184381.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166231643|sp|A4Y9E9|SYL_SHEPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145565647|gb|ABP76582.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 859

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++   KTFD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKTFDIYTTRPDTLMGVTYVAIAA 263


>gi|253582717|ref|ZP_04859938.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835587|gb|EES64127.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 869

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G    V+   N  N +    +L  SYD    I +    ++   + ++K++ +KG IY 
Sbjct: 92  QNGAHPAVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGLIYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W    +    N+    +  DG+ +      V   E E +FF+++ Y D+LL  +
Sbjct: 152 KKSLVNWCPECNTVLANE----QVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGH 207

Query: 181 ----ESHPEFILPIER 192
               +  PE +L +++
Sbjct: 208 KEIKDGWPEKVLTMQK 223



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 90/188 (47%), Gaps = 27/188 (14%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++ K EK+SKS  N +DP E++E+ G D  R F++      K+  ++++GL         
Sbjct: 615 LVSKIEKMSKSKNNGVDPEEMVEKYGADTTRLFIMFAAPPEKELEWNENGLA-------- 666

Query: 356 NGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
            G    +++   M+++  + M        A +  D++++   ++ ++++ E+++N    +
Sbjct: 667 -GAYRFLTKIWRMVMEHKENMEFGEINLNAVSREDKALIIKLNQTIKKVTESIENDYHFN 725

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY----VTVEVIRQLAILLQAFVP 467
            ++A  + L++E   +          KTN   A  V      +  EV+R + ++L  F P
Sbjct: 726 TSIAATMELINETQDF----------KTNVIEAGNVTSESKKIFGEVVRNIILMLSPFTP 775

Query: 468 KLANKIFD 475
              + +++
Sbjct: 776 HFCDDLWE 783


>gi|212224954|ref|YP_002308190.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009911|gb|ACJ17293.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 1065

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 160/336 (47%), Gaps = 21/336 (6%)

Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           W  E+G  + + ++++  KL    E + E I   E  +E +  ++  L    L R   D 
Sbjct: 474 WQSEDGEIYVVGSFEELVKLSVAIEVNGERIDLPEDYSEKLRVIEEKLGPEDLHRPYVDA 533

Query: 216 WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRF 270
           + IK+          ++ VW D+      +  Y  N +  K + WPAD  V G+D + ++
Sbjct: 534 FIIKVNGKEMRRVKDVVDVWFDSGIASWASLDYPRNEELFK-ELWPADFIVEGEDQVTKW 592

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                 A +++ +    +KV  HG++L  KG+K+SKSLGN+I P EV+++ G D  R+++
Sbjct: 593 FYSQQAASVIAFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRFYM 652

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGA--FTES 386
           +      ++  +   GL +     + N + N+   S + M L ++D     P    F E 
Sbjct: 653 LWATNPWENLKFSWKGLAQ--VKRMLNILWNVYVLSATYMSLDNFDPTRVNPEELPFREE 710

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPD 442
           D  ILS  + ++ E+ E ++   + +A   + + V E + R++     ++ W ++  +PD
Sbjct: 711 DRWILSRVNSLIGEVTEGIETFRLTKATRAIYNFVVEDLSRWYIRLIRKRMW-VEGDDPD 769

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + +   Y   +V   L  L+  F P +A +I+  L 
Sbjct: 770 KLAA-YYTVWKVFNVLLRLMAPFTPYIAEEIYQNLL 804



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMVIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---------WKKISD 115
            G+ TK  ++             +I  D+FIR  ++   +  +++         W    +
Sbjct: 101 LGLKTKKDIET------------EIGVDEFIRKCKEFALNNLKVMTEQFKMLGIWMDWDN 148

Query: 116 KGDIYKGCY--SGWYSLR 131
                K  Y  SGW++L+
Sbjct: 149 PYMTIKNEYIESGWFTLK 166


>gi|310826172|ref|YP_003958529.1| isoleucyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308737906|gb|ADO35566.1| isoleucyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 1039

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 122/238 (51%), Gaps = 18/238 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PAD    G D  R  F+++   +  ++   P  KKV  +  IL  +G+K+SKS GN +D
Sbjct: 548 YPADFICEGIDQTRGWFYSLLAISSFVTGKSPY-KKVLVNDLILDAEGQKMSKSRGNTVD 606

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E+ ++ G DALR++L+          +D +GLK+ V +   N + N  + +   +  +
Sbjct: 607 PFELFDQYGADALRWYLLYVSPAWTPTRFDVEGLKE-VQSKFFNTLKN--TYNFFTLYAN 663

Query: 373 YDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR 426
            DG+ P           E D  ILS  +R++QE+R  M+   + +A+ ++ + V+E +  
Sbjct: 664 TDGIDPRTFFVDYHKRPEIDRWILSKYNRLVQEVRGEMEIYDLTKAVRKIQNFVNEDLSN 723

Query: 427 YF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++   + ++ W  + T   +A  V   T EV+  LA L+  F P ++ +I+  L  A+
Sbjct: 724 WYIRRNRRRFWGSELTEDKKA--VFNTTFEVLEGLARLVAPFAPYISEEIYTKLTGAE 779


>gi|218295828|ref|ZP_03496608.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243566|gb|EED10094.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 878

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+   H+GH     + DVLARF ++ G +VL   G D  G     AA
Sbjct: 31  KRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  QN R  ++  +++ I Y  D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGLHPRDWTYQNIRQAKESLELMGILYDWDREVTTCEPDYYRWNQWIFIKMWEKGLAY 150

Query: 121 K-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           + G    W         N+  V    +G+ +  +  PV+  E   ++ R++AY D+LL  
Sbjct: 151 RAGGLVNWCPKCQTVLANEQVV----EGRCWRHEDTPVEKRELTQWYLRITAYADRLLQD 206

Query: 180 YES--HPEFILPIER 192
            E    PE +  ++R
Sbjct: 207 LEGLDWPEKVKAMQR 221


>gi|228941625|ref|ZP_04104172.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974554|ref|ZP_04135120.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981149|ref|ZP_04141449.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778349|gb|EEM26616.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784957|gb|EEM32970.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228817837|gb|EEM63915.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 881

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|319427333|gb|ADV55407.1| leucyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 859

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++   KTFD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKTFDIYTTRPDTLMGVTYVAIAA 263


>gi|317055676|ref|YP_004104143.1| valyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447945|gb|ADU21509.1| valyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 897

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W  +     +  G+ D        F+P    V G DI+ F    W + ++ + L    K
Sbjct: 475 TWFSSALWPFSILGWPDKQSDDFNYFYPTSTLVTGYDIIGF----WVSRMIFSGLAYTGK 530

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
                V  HG +   +G K+SKSLGN IDP+EVI++ G DALR+ LV+  + G D  Y +
Sbjct: 531 APFDTVLIHGIVRDSQGRKMSKSLGNGIDPLEVIDQYGADALRFMLVQGSSPGNDMRYSE 590

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +    N    N I N    S  +++      I  P   T  D+ ILS  ++V++E+  
Sbjct: 591 EKIVAMRN--FTNKIWNA---SRFLLMNMTIDKIELPKELTLEDKWILSSLNKVIKEVTY 645

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           N+++  +  A  +V   +  S  D Y +  K       +      V  V   V+  +  +
Sbjct: 646 NLEHFEMGVAAQKVYDFIWNSFCDWYIELAKN-RFNGEDAQAKKNVENVLAYVLTDILKM 704

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 705 LHPFMPFITEEIYQAL 720



 Score = 43.9 bits (102), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 29/191 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S A+  PN   Q H+GHA +  + D+L RF R+ G   L+  GTD        KI +A +
Sbjct: 39  SIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALWIPGTDHAAIATEAKIVEAMR 98

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T                 + F  +     R +    D   + F  T + +      
Sbjct: 99  QEGITKADLGRDKFMERAWAWKEKFGGRIVEQLRTLGTSCDWEREHF--TMDDQCSKAVL 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166
            ++ K+ ++G IY+G     +  + +   +D EV Y   DG +++  +     ++E G F
Sbjct: 157 EVFVKLYEEGLIYRGNRMVNWCPKCQTSISDAEVEYDNKDGNFWHILYK----VKETGEF 212

Query: 167 FRLSAYQDKLL 177
             ++  + + +
Sbjct: 213 LEIATTRPETM 223


>gi|120597870|ref|YP_962444.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166231645|sp|A1RGU5|SYL_SHESW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120557963|gb|ABM23890.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 859

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++   KTFD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKTFDIYTTRPDTLMGVTYVAIAA 263


>gi|315045129|ref|XP_003171940.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311344283|gb|EFR03486.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 946

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+   H+GH     I+DVLARF ++ G DVL   G D  G     AA 
Sbjct: 76  KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENAAI 135

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  QN  N RD    L I +  D  + T     +   + L+  + +KG  Y+
Sbjct: 136 ERGIHPEGWTKQNIANMRDQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 195

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V   A+G  + +    V+  E + +FFR++++++ LL    
Sbjct: 196 AEAVVNYDPIDKTVLANEQVVD-ANGCSWRSGAK-VEKRELKQWFFRITSFKEALLKDLD 253

Query: 178 SYYESHPEFILPIER 192
           S   S P+ IL ++R
Sbjct: 254 SLSGSWPDRILTMQR 268


>gi|315641423|ref|ZP_07896496.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
 gi|315482810|gb|EFU73333.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
          Length = 898

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 29/279 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G+  P DP+       ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 449 GMTEPSDPENWHQDNDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 508

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I   +G K+SKSLGN IDP+EVIE+ G DA
Sbjct: 509 ----WVSRMIFQSLEFTDRRPFKNVLMHGLIRDEQGRKMSKSLGNGIDPMEVIEKYGADA 564

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           LR+FL    A G+D  +  + +      D A    N +  +   +L + +GM        
Sbjct: 565 LRWFLSNGSAPGQDVRFSYEKM------DAAWNFINKIWNASRFVLMNCEGMTAAELQIN 618

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  + +D  IL+  +  + ++ +         A  Q+ + + +   D Y +  K   L  
Sbjct: 619 GEKSVADRWILARLNETVAKVTDLFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYG 677

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N     T   V V V+ Q   LL   +P +  +I+  L
Sbjct: 678 ENEAAKQTNKAVLVYVLDQSLRLLHPIMPFVTEEIWSKL 716



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 60  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLR 119

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  +   LD S + F  T ++   +  R
Sbjct: 120 EQGISRYDLGREKFVDQVWEWKEEYAGHIREQWSKLGLSLDYSRERF--TLDEGLSEAVR 177

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 178 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 225


>gi|313885106|ref|ZP_07818858.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619797|gb|EFR31234.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 877

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 445 VLDTWFSSALWPFSTMGWPDKSQNDYQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGQR 504

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIEE GVDALR+FL    A G+D  Y  
Sbjct: 505 PF-KNVLLHGLIRDEEGRKMSKSLGNGIDPMDVIEEYGVDALRWFLANGSAPGQDVRYSP 563

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEI 401
           + L    N    N I N  SR V M + D        G+ T  +D+ ILS     ++ +
Sbjct: 564 EKLAAAWN--FINKIWN-ASRYVLMKVGDMTLADVEIGSDTSLADQWILSRLQETIETV 619



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 18/110 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA+++ + D+L R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDVTLQDMLIRQKRMLGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114
             K+  +  SR         D+  + F+  T   ++ +  T R  W K+ 
Sbjct: 95  EAKLKEEGLSR--------YDLGREKFLEKTWEWKEEYAQTIRQQWAKMG 136


>gi|193794510|gb|ACF21467.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P      D  +L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPEPAELEAIDRVLLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVADL 166


>gi|88601905|ref|YP_502083.1| isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121731688|sp|Q2FPJ4|SYI_METHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|88187367|gb|ABD40364.1| Isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 1062

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 26/271 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I  VW D+      T G+  N D    + WPAD    G+D  R  F++    A  ++ N 
Sbjct: 515 IFDVWFDSAMASWATLGFPRN-DALFHEMWPADFITEGQDQTRGWFYSQL-GASTIAFNR 572

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              K V  HGF L   G K+SKSLGNV+ P EV+++ GVD LR +++   A  +D  ++ 
Sbjct: 573 SPYKSVLMHGFALDADGRKMSKSLGNVVTPEEVVQKFGVDVLRLYILSSNAPWEDLKFNW 632

Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF------------TESDESI 390
           DG+   VN  + N + N+    +  MIL  +     + G +             E D  I
Sbjct: 633 DGVST-VNRTM-NILWNVYRFPLPYMILDGFSPAQTSDGKYDDEYIVRSYREMPEIDRWI 690

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRAST 446
           +S  + + + +  +M    +HR    +++ + E + R Y    +P  W L++ +PD+   
Sbjct: 691 ISRINTIARSVSADMDEYQLHRVTRLLMNFILEDLSRWYVQIVRPRMW-LEEDSPDKKFA 749

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +T   +R L  LL  F P +   +++ L
Sbjct: 750 YETITY-CLRTLCRLLAPFTPHITEAMYENL 779


>gi|148654314|ref|YP_001274519.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566424|gb|ABQ88569.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 52/350 (14%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           E +F R     D  L+        I+P ER  +V       ++D  +SR+ + WG +IP 
Sbjct: 382 EQWFVRARPLADLALAAVREGRTRIVP-ERFEKVFFHWLENIQDWCISRQLW-WGHRIPV 439

Query: 222 -------------DDPQY----------IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWP 257
                        DDP            ++  W  +     +T G+ D+ PD    +F+P
Sbjct: 440 WYTPDGQMIVPGPDDPDPQGEGLVQDPDVLDTWFSSALWPFSTLGWPDDTPD--MRRFYP 497

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVI 311
             +   G DIL     +W A ++     L  K     V+ HG +  K G K+SK+ GNV+
Sbjct: 498 TSVMETGYDIL----FFWVARMMMMGCYLTGKTPFHTVYLHGLVRDKDGRKMSKTYGNVV 553

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           +P++VIE+ G DALR+ L    + G+D   + + ++   N   AN   N+       +L 
Sbjct: 554 NPLDVIEQHGADALRFMLATSSSPGQDLNLNPERIEAARN--FANKTWNI----ARFVLS 607

Query: 372 DYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSE-VDRY 427
             D   P   P   T +D  ILS   R++ ++   M++     A   +   L SE  D Y
Sbjct: 608 KLDAHTPPGDPRPATLADRWILSRYHRLVTDVDRLMRSYNFGEAGRSIQEFLWSEFADWY 667

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K    +    +    VLY T+E   +   LL  F+P +  + +  L
Sbjct: 668 VEVAKVQFEQDALQESTRAVLYTTLEGALR---LLHPFMPFVTEETWQYL 714



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 35/214 (16%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           +R    IS        + H+GHA  + I DVL R+HR+ G   L+  GTD  G     ++
Sbjct: 42  DRPPFVISMPPPNVTGELHMGHAMFVAIEDVLTRWHRMLGDPTLWLPGTDHAGIATQLQV 101

Query: 59  AKAAQNAGVTTK-----VFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102
            +  Q+ GVT +      F+ +            +R  R +    D + + F  T +   
Sbjct: 102 ERLLQSEGVTRQQIGREAFLRRTWEWKEKYGGEITRQLRRLGASCDWTRERF--TLDPML 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH------- 154
               R  +K++ D G IY+G     +S   +   +D EV Y+  D Q Y+ ++       
Sbjct: 160 SRAVRAAFKRLYDDGLIYRGYRMVNWSPNLQTAVSDLEVEYEERDVQMYHVRYPLADDGW 219

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +P  W        R ++   + ++   + PE I+
Sbjct: 220 HPAAWGSG-----RWASGAREFITVATTRPETIM 248


>gi|116493039|ref|YP_804774.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116103189|gb|ABJ68332.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 888

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     TT G+ D       +++P    V G DI+ F    W A ++  
Sbjct: 450 DPD-VLDTWFSSALWPFTTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVARMIFQ 504

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL      G
Sbjct: 505 SLEFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAG 564

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +  D +    N    N I N  SR V M L   +   +P     T +D+ ILS  +
Sbjct: 565 QDLRFSYDKMDSAWN--FINKIWN-ASRYVIMNLDQVEQPKLPELSQLTLADKWILSRLN 621

Query: 396 RVLQEI 401
           + ++++
Sbjct: 622 KTVEQV 627



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 25/184 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D ++  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMLGYDTVWIPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             GV+      + FVDQ      + AD          L + YD    T ++      + +
Sbjct: 102 EQGVSRYDLGREKFVDQVWEWKDEYADTIHQQWAKMGLSLDYDRERFTLDEGLSKAVKKV 161

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +  + +KG IY+G Y   +  +     +D EV ++   G +Y+ ++    +  +EG+ F 
Sbjct: 162 FVTLYEKGLIYRGEYIINWDPQARTALSDIEVEHQDDQGAFYHVKY----FFADEGFEFN 217

Query: 169 LSAY 172
              Y
Sbjct: 218 GKNY 221


>gi|227892642|ref|ZP_04010447.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865513|gb|EEJ72934.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 879

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTAGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGVEAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSADFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L +  
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    + V+ E+
Sbjct: 591 KPAHMPDVSKFDLADSWIFDRLNHVVGEV 619



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|326476475|gb|EGE00485.1| leucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 933

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA 
Sbjct: 75  KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAI 134

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  QN  N ++    L I +  D  + T     +   + L+  + +KG  Y+
Sbjct: 135 ERGIHPEGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V          A+   V+  E + +FFR++A+++ LL    
Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251

Query: 178 SYYESHPEFILPIER 192
           S   S P+ IL ++R
Sbjct: 252 SLSGSWPDRILTMQR 266


>gi|260495228|ref|ZP_05815356.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197285|gb|EEW94804.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 859

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++ K  D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSEIVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|302660650|ref|XP_003022002.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
 gi|291185926|gb|EFE41384.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
          Length = 975

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 39/280 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+   H+GH     I+DVLARF ++ G DVL   G D  G     AA 
Sbjct: 75  KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENAAI 134

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  QN  N R+    L I +  D  + T     +   + L+  + +KG  Y+
Sbjct: 135 ERGIHPEGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V          A+   V+  E + +FFR++A+++ LL    
Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251

Query: 178 SYYESHPEFILPIER------RNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMY 229
           S   S P+ IL ++R      R  ++ F       LS+  +T D  +    PD    + Y
Sbjct: 252 SLSGSWPDRILTMQRHWLGKSRGALVPFT------LSIPGETLDIEVFTTRPDTLHGVQY 305

Query: 230 VWIDA--------------LTNYLTTTGYLDNPDGSKAKF 255
           + +                L  ++ +TG L  P  +KA F
Sbjct: 306 IALSTSHPVVKKMAANTPELQEFINSTGSL--PPETKAGF 343



 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 15/190 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351
           EK+SKS  N +DP   IE  G DA R  ++      +   +D+    G+++      +  
Sbjct: 673 EKMSKSKYNGVDPNTCIESYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 732

Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            D  N +      S    L   + M +P     +E++ ++L + +  +  +   ++    
Sbjct: 733 EDTGNSLKRANFSSAPDALSSLNDMALPPLDKLSETESNLLHMTNNTISSVSYCLEKN-- 790

Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVP 467
              L  VIS L+   +       P E  KT+P   S T L+ T+ + +  L  +L    P
Sbjct: 791 QYGLNTVISDLIKLTNAISAVPLPEESSKTSPSAQSVTPLHTTLYIALNSLLRMLAPIAP 850

Query: 468 KLANKIFDIL 477
             A++ +++L
Sbjct: 851 AFASECWEVL 860


>gi|257452950|ref|ZP_05618249.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059491|ref|ZP_07923976.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685167|gb|EFS22002.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 854

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 34  KENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAENAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G     +   N  N +    +L  SY  D  I +    ++   + ++KK+ +KG +Y 
Sbjct: 94  QNGAHPAKWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGLVYK 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W         N+    +  DG+ +      V   E E +FF+++ Y D+LL  +
Sbjct: 154 KKSLVNWCPDCKTVLANE----QVEDGKCWRHSKTAVIQKELEQWFFKITDYADELLEGH 209

Query: 181 E----SHPEFILPIER 192
           E      PE +L +++
Sbjct: 210 EELRGGWPEKVLTMQK 225



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 102/208 (49%), Gaps = 34/208 (16%)

Query: 278 FLLSANLPLP-KKVFSHGF---ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           FL +  + L  +K FS      ++ K EK+SKS  N +DP E+I + G D  R F++   
Sbjct: 585 FLFAEEVELKGEKAFSKKTGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAA 644

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESI 390
              K+  ++++GL          G    ++R   ++L++ D +        A  ++D+++
Sbjct: 645 PPEKELEWNENGLA---------GAYRFLTRVWRLVLENQDHISLEKIDYTAINKADKAL 695

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +   ++ ++++ E++++    + ++A  + L+++V  Y               ++ +  Y
Sbjct: 696 IIKLNQTIKKVTESIEDDYHFNTSIAATMELLNDVQAY---------------QSDSTQY 740

Query: 450 VTV--EVIRQLAILLQAFVPKLANKIFD 475
             V  E ++Q+ I+L  FVP   +++++
Sbjct: 741 TRVLGEALKQIVIMLSPFVPHFCDELWE 768


>gi|295692675|ref|YP_003601285.1| valyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030781|emb|CBL50260.1| Valyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 879

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER  + +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPDASKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|257466670|ref|ZP_05630981.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917824|ref|ZP_07914064.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691699|gb|EFS28534.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 854

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 34  KENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAENAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G     +   N  N +    +L  SY  D  I +    ++   + ++KK+ +KG +Y 
Sbjct: 94  QNGAHPAKWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGLVYK 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W         N+    +  DG+ +      V   E E +FF+++ Y D+LL  +
Sbjct: 154 KKSLVNWCPDCKTVLANE----QVEDGKCWRHSKTAVIQKELEQWFFKITDYADELLEGH 209

Query: 181 E----SHPEFILPIER 192
           E      PE +L +++
Sbjct: 210 EELRGGWPEKVLTMQK 225



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 102/208 (49%), Gaps = 34/208 (16%)

Query: 278 FLLSANLPLP-KKVFSHGF---ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           FL +  + L  +K FS      ++ K EK+SKS  N +DP E+I + G D  R F++   
Sbjct: 585 FLFAEEVELKGEKAFSKKTGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAA 644

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESI 390
              K+  ++++GL          G    ++R   ++L++ D +        A  ++D+++
Sbjct: 645 PPEKELEWNENGLA---------GAYRFLTRVWRLVLENQDHISLEKIDYTAINKADKAL 695

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +   ++ ++++ E++++    + ++A  + L+++V  Y               ++ +  Y
Sbjct: 696 IIKLNQTIKKVTESIEDDYHFNTSIAATMELLNDVQAY---------------QSDSTQY 740

Query: 450 VTV--EVIRQLAILLQAFVPKLANKIFD 475
             V  E ++Q+ I+L  FVP   +++++
Sbjct: 741 TRVLGEALKQIVIMLSPFVPHFCDELWE 768


>gi|237743871|ref|ZP_04574352.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432902|gb|EEO43114.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 859

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPAIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++ K  D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSEIVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|269865023|ref|XP_002651778.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063894|gb|EED42278.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 278

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D     
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129

Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158
                          I   C  G  +  D+      Y+ D +  +  + +    +  P Q
Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
               +  FF L    ++L  Y+++          R    +++K  L    ++RK    WG
Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242

Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240
           + +P    DD   + YVW DA   YL+
Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267


>gi|269865054|ref|XP_002651788.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063873|gb|EED42268.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 313

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D     
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129

Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158
                          I   C  G  +  D+      Y+ D +  +  + +    +  P Q
Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
               +  FF L    ++L  Y+++          R    +++K  L    ++RK    WG
Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242

Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240
           + +P    DD   + YVW DA   YL+
Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267


>gi|86158812|ref|YP_465597.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775323|gb|ABC82160.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 1052

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 147/350 (42%), Gaps = 48/350 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ R+       +   E      +P +  N  ++++++ + D  +SR+ + WG +IP   
Sbjct: 375 WYVRIEPLARPAIEAVEQGKTRFIPEQWTNTYMAWMRN-IHDWCISRQLW-WGHQIPAWY 432

Query: 222 ----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                     + P+               ++  W  +     +T G+ +  D  +  F+P
Sbjct: 433 CPDGHVTVARETPEACSTCGKRELRQDEDVLDTWFSSGLWPFSTMGWPEQTDTLRT-FYP 491

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVI 311
             +   G DI+     +W A ++   L    +V      LH      KG+K+SK+ GNVI
Sbjct: 492 TSVMETGHDII----FFWVARMMMMGLHFMGEVPFRTVYLHPMVRDEKGQKMSKTKGNVI 547

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+ + E+ G DALR+ L    A G+D    K+ ++       AN + N  SR   M L 
Sbjct: 548 DPLVITEQYGADALRFTLAALTAQGRDIKLAKERIEG--YRAFANKLWN-ASRFALMNLA 604

Query: 372 DYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            Y+  G  P   A T +D  IL+   R + E  E +     + A   V + V     D Y
Sbjct: 605 GYEERGEDPARAARTPADRWILARLQRTVNETVEALDAFRFNDAANAVYAFVWHELCDWY 664

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L   +P+   +V  V V  ++    LL  F+P +  +++ +L
Sbjct: 665 IELSKE-ALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWHVL 713



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +R +   S  +  PN     H+GHA    + DVL R+ R+ G + L+  GTD  G
Sbjct: 44 DRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAG 98


>gi|227535262|ref|ZP_03965311.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187146|gb|EEI67213.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 880

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 15/188 (7%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P D  V G DI+ F    W A ++  
Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L        K    HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 499 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +
Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 615

Query: 396 RVLQEIRE 403
             ++++ +
Sbjct: 616 ETIKQVTD 623



 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 15/89 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 41  SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMD-----------HAGI 89

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T+  V+   R  ++     D+  D F++
Sbjct: 90  ATQAKVEAKLR--KEGISRYDLGRDKFVQ 116


>gi|229032112|ref|ZP_04188090.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729202|gb|EEL80200.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 867

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P  I         +  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEEPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|228987710|ref|ZP_04147821.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771984|gb|EEM20439.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 867

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|322367954|ref|ZP_08042523.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551970|gb|EFW93615.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 1065

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 23/307 (7%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   +  + DL++++    +  ++PD    +  VW+D+      T  Y  NPD  + +
Sbjct: 503 EDVDLHRPTVDDLTITKDGTTY-TRVPD----VFDVWLDSSVASWGTLDYPSNPDDFE-E 556

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL--SANLPLP-KKVFSHGFILHK-GEKISKSLGNV 310
            WPADL +   D  R    +W    +  +A   +P  +V  HG+ L + G K+SKS+GN+
Sbjct: 557 LWPADLIMEAHDQTR--GWFWSQLGMGTAALDEVPYDEVLMHGWALAEDGRKMSKSIGNI 614

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MI 369
           + P E IE  G D +R FL+ +   G+D  +  D ++    +   N + N+    +  M 
Sbjct: 615 VSPEEAIERHGADPMRLFLLSQNPQGEDMRFSWDEMQNMQRS--LNILWNVFRFPLPYMR 672

Query: 370 LKDYD-GMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR 426
           L  +D   +    A TE  DE +LS    V  E+ E+  +    +AL  ++  V E V R
Sbjct: 673 LDGFDPDEVDVQDAETELVDEWLLSRLQTVTTEMTEDWDDFRQDKALRTLLDFVVEDVSR 732

Query: 427 YFDA---QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++     ++ W+   +   +A+   +    V+++L  LL  F P ++  I+  L   +  
Sbjct: 733 FYIQVVRERMWDEADSASKQAAYATF--YHVLKELVALLAPFAPFVSEDIYQNLTGDEGE 790

Query: 484 RCFQSLD 490
                LD
Sbjct: 791 ESVHMLD 797


>gi|229198587|ref|ZP_04325289.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584869|gb|EEK42985.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 867

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|193794512|gb|ACF21468.1| methionyl-tRNA synthetase [Actinomyces johnsonii]
 gi|193794524|gb|ACF21474.1| methionyl-tRNA synthetase [Actinomyces johnsonii]
          Length = 168

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +     DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLARYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP P    + D ++L         +   +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GRIPEPVELQDIDRALLDAVEAGFASVGGLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQVVTDL 166


>gi|217077950|ref|YP_002335668.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037805|gb|ACJ76327.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 864

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 22/265 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +N    K +F+P D+ V G DI+ F    W A ++      
Sbjct: 447 VLDTWFSSALWPFSTLGWPENTSDLK-EFYPTDVLVTGFDIIFF----WVARMVMMGYEF 501

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V+ H  +  K G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D  
Sbjct: 502 MGKKPFNDVYIHQLVRDKFGRKMSKSLGNGIDPLEVIQEYGADPMRFTLALLAAQGRDIK 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D   +    +   AN I N  +R + M L+DY   IP       SD+ ILS   + ++ 
Sbjct: 562 LDIKNID--TSKKFANKIWN-ATRFIIMNLEDYKE-IPLEN-LNLSDKWILSRLQKTIKN 616

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   ++    + A  ++ +   +   D Y +  KP    +   +    V  V V V+   
Sbjct: 617 VTNAIEQYEFNLAAREIYNFFWDEFCDWYIEVSKP----RLKTEEKHLVQNVLVTVLDNS 672

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             LL  F+P +  +++  L  + E+
Sbjct: 673 LKLLHPFMPFITEELWQKLPTSGES 697



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 21/162 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA  + + D+L RF R++G   L+  G D  G      + KA +
Sbjct: 38  SIVIPPPNITGKIHMGHALNITLQDILVRFKRMNGFKTLWVPGEDHAGIATQTAVEKAIE 97

Query: 64  NAG-----VTTKVFVD---------QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
             G     +  + F++         +N+   + MA    + +     T ++      + +
Sbjct: 98  KEGKKREELGREKFLEIVWDWANTYRNTIKNQIMAIGASVDWTRERFTLDEGLSKAVKKV 157

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           +  +  KG IYKG Y   +  R +   +D+EV Y+  DG+ Y
Sbjct: 158 FVSLYKKGLIYKGKYIVNWCPRCKTVLSDEEVEYEEHDGKLY 199


>gi|85706318|ref|ZP_01037412.1| valyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85669091|gb|EAQ23958.1| valyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 1033

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 38/325 (11%)

Query: 171 AYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           AY D+L S         ++ +  R+E +  + S L + + ++           DP +++Y
Sbjct: 548 AYHDRLASLPVPLAAMRVVEVASRDEALHQLASALAEYTATQ-----------DPTHLVY 596

Query: 230 -VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL 280
            VW D        ++ L   G L  P+ +    +++P  + + G DI+ F    W A ++
Sbjct: 597 PVWRDPDVLDTWFSSGLWPIGTLGWPEDTAELKRYFPTSVLITGFDIIFF----WVARMM 652

Query: 281 SANLPL-PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +  +K FSH ++       KG+K+SKSLGNV+DP+++I + G DA+R+ L    A
Sbjct: 653 MMQYAVVGQKPFSHVYVHALVRDEKGKKMSKSLGNVLDPLDLIADYGTDAVRFTLTSMAA 712

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D    K+ +    N      + N    +         GM+PTP A    ++ I+   
Sbjct: 713 MGRDLKLSKERIAGYRN--FTTKLWNAARFAEMNGAVGSTGMVPTPTATV--NKWIIGET 768

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           ++    + E ++N   + A   + + V  +  D Y +  KP  L      +A T   +  
Sbjct: 769 AKTRATVDEALENFRFNDAAGALYAFVWGTVCDWYVEFSKPLLLDGDAATKAETQATMAW 828

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            VI Q  ILL    P +  +++  L
Sbjct: 829 -VIDQGLILLHPITPFITEELWGTL 852



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           +AG+
Sbjct: 46  SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGHDTLWQPGQD-----------HAGI 94

Query: 68  TTKVFVDQ 75
            T++ V++
Sbjct: 95  ATQMVVER 102


>gi|327382286|gb|AEA53762.1| Valyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385481|gb|AEA56955.1| Valyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 880

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P D  V G DI+ F    W A ++  
Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L        K    HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 499 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +
Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 615

Query: 396 RVLQEI 401
             ++++
Sbjct: 616 ETIKQV 621



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  ++  R
Sbjct: 101 KEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERF--TLDKGLNEAVR 158

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  +G IY+G Y   W      A  + + +++   G +Y+ ++
Sbjct: 159 KVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDDKGAFYHVKY 206


>gi|239631662|ref|ZP_04674693.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526127|gb|EEQ65128.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 883

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P D  V G DI+ F    W A ++  
Sbjct: 447 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 501

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L        K    HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 502 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 561

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +
Sbjct: 562 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 618

Query: 396 RVLQEI 401
             ++++
Sbjct: 619 ETIKQV 624



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 44  SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 103

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  ++  R
Sbjct: 104 KEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERF--TLDKGLNEAVR 161

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  +G IY+G Y   W      A  + + +++   G +Y+ ++
Sbjct: 162 KVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDDKGAFYHVKY 209


>gi|116494743|ref|YP_806477.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191638254|ref|YP_001987420.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|301066302|ref|YP_003788325.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116104893|gb|ABJ70035.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712556|emb|CAQ66562.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|300438709|gb|ADK18475.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 880

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P D  V G DI+ F    W A ++  
Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L        K    HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 499 GLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +
Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLN 615

Query: 396 RVLQEI 401
             ++++
Sbjct: 616 ETIKQV 621



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  ++  R
Sbjct: 101 KEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERF--TLDKGLNEAVR 158

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  +G IY+G Y   W      A  + + +++   G +Y+ ++
Sbjct: 159 KVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDDKGAFYHVKY 206


>gi|256842870|ref|ZP_05548358.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262045836|ref|ZP_06018800.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381704|ref|ZP_06627685.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977611|ref|ZP_07789358.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256614290|gb|EEU19491.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260573795|gb|EEX30351.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921751|gb|EFD98772.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895350|gb|EFQ44417.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 879

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER  + +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGEETPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPDASKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|325956486|ref|YP_004291898.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333051|gb|ADZ06959.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 879

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L +  
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPENA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPEVSKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|325295640|ref|YP_004282154.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066088|gb|ADY74095.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 875

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 19/259 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+    D  K  F+P DL V G DI+ F    W + ++      
Sbjct: 448 VLDTWFSSAMWPFGTLGWPKRTDDLKV-FYPTDLLVTGFDIIFF----WVSRMMMMGYYF 502

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+     V+ H  +   KG+K+SK+ GNVIDP+E++E+ G D LR+ L    A G+D  
Sbjct: 503 MKEKPFSDVYVHALVRDEKGQKMSKTKGNVIDPLEMVEKYGADTLRFTLAALAAQGRDIR 562

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             +  ++   +   AN I N ++R +   L++ +  +    ++   D+ ILS  S+ ++ 
Sbjct: 563 LSEKIIEGYRH--FANKIWN-IARFIFSALENVE--MKEAVSYAPEDKWILSKLSKTVEI 617

Query: 401 IRENMQNQLIHRALAQVIS-LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + + ++N   + A   +   L SE  D Y +  K    K T  ++  TVL+V + V+R  
Sbjct: 618 VDKELENYRFNDAAKAIYQFLWSEFADWYIEFSKQRVYKGTEEEK-RTVLHVLLTVLRDA 676

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL   +P L  +I+  L
Sbjct: 677 MKLLHPIMPFLTEEIYQKL 695



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 5  EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          EK   S  +  PN     H+GHA    + D++ R+ R+ G +V +  GTD  G
Sbjct: 36 EKPKFSVVLPPPNVTGVLHVGHALNSTLQDIICRWKRMKGFEVCWIPGTDHAG 88


>gi|324328361|gb|ADY23621.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 881

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGMSRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|229141196|ref|ZP_04269735.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228642237|gb|EEK98529.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 867

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|269865220|ref|XP_002651848.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063768|gb|EED42209.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 286

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 40/267 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD----- 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D     
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEIN 129

Query: 119 ---------------IYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQ 158
                          I   C  G  +  D+      Y+ D +  +  + +    +  P Q
Sbjct: 130 QMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-Q 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWG 217
               +  FF L    ++L  Y+++          R    +++K  L    ++RK    WG
Sbjct: 187 IKTTKQLFFNL----NELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWG 242

Query: 218 IKIP----DDPQYIMYVWIDALTNYLT 240
           + +P    DD   + YVW DA   YL+
Sbjct: 243 VPVPLKEYDDK--VFYVWYDAPIGYLS 267


>gi|168333858|ref|ZP_02692101.1| valyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 877

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 253 AKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGN 309
           A F+P  + V G DI+ F  +   +        +P  K V  HG I   +G K+SKSLGN
Sbjct: 470 AHFYPTSVLVTGYDIIFFWVVRMVFSGIEQMGEVPF-KDVLIHGLIRDSEGRKMSKSLGN 528

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            IDP++VI++ G DALR  LV   A G D  FY +   +   N +  N + N  +R + M
Sbjct: 529 GIDPLDVIKQYGADALRLTLVTGNAPGNDMRFYFE---RVEGNRNFLNKLWN-ATRFILM 584

Query: 369 ILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
             ++ D  +   P   T +D+ ILS  + +   + EN+    +  A+ +V     E   D
Sbjct: 585 NCENEDIDLCTMPKNLTTTDKWILSKANNLTTIVTENLDKYELGMAVGKVYDFAWEEFCD 644

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            Y +  KP      +  R +  LY    V+  +  +L  F+P +  +IF
Sbjct: 645 WYIEMVKPRLYDNDDLTRPAA-LYTLKTVMIDILKMLHPFIPFVTEEIF 692



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 43/198 (21%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L R+ R+ G + L+  GTD     IA   +      +  +
Sbjct: 43  PNITGQLHMGHALDNTLQDILTRYKRMXGYNTLWMPGTDH--ASIATEVKIVNKLKEEGI 100

Query: 74  DQN----------------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           D+N                      ++  R +    D   + F  T +         ++ 
Sbjct: 101 DKNDLGRDEFLKRAWQWKDEYGGLITQQLRKLGSSCDWDRERF--TMDAGLSAAVEAVFI 158

Query: 112 KISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K+ +KG IYKG     W  +   +  + + +++  +G +Y+  +  V             
Sbjct: 159 KLYEKGYIYKGSRIINWCPVCKTSISDAEVIHEEREGNFYHLNYKIVG------------ 206

Query: 171 AYQDKLLSYYESHPEFIL 188
              D+++ +  + PE +L
Sbjct: 207 --SDEVIRFATTRPETLL 222


>gi|227877308|ref|ZP_03995381.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256848756|ref|ZP_05554190.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|227863164|gb|EEJ70610.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256714295|gb|EEU29282.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 879

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER  + +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGEETPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPDASKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|326484075|gb|EGE08085.1| leucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 975

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA 
Sbjct: 75  KEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAI 134

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  QN  N ++    L I +  D  + T     +   + L+  + +KG  Y+
Sbjct: 135 ERGIHPEGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQ 194

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V          A+   V+  E + +FFR++A+++ LL    
Sbjct: 195 AEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 251

Query: 178 SYYESHPEFILPIER 192
           S   S P+ IL ++R
Sbjct: 252 SLSGSWPDRILTMQR 266



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 15/190 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKK------RVN 351
           EK+SKS  N +DP   IE  G DA R  ++      +   +D+    G+++      +  
Sbjct: 673 EKMSKSKYNGVDPNTCIENYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRIWKAV 732

Query: 352 ADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            D  N +      S    L   + M +P  G  +E++ ++L + +  +  +   ++    
Sbjct: 733 EDTGNSLKRANFASAPGALSSLNDMALPPLGKLSETESNLLLMTNNTISSVSYCLEKN-- 790

Query: 411 HRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVP 467
              L  VIS L+   +       P E  K +P   S T LY T+ + +  L  +L    P
Sbjct: 791 QYGLNTVISDLIKLTNTIAAVPLPGESSKPSPSAQSITQLYTTLYISLNSLLRMLAPIAP 850

Query: 468 KLANKIFDIL 477
             A++ +++L
Sbjct: 851 AFASECWEVL 860


>gi|47566648|ref|ZP_00237470.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|229158076|ref|ZP_04286146.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|47556678|gb|EAL15010.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228625395|gb|EEK82152.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 881

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|42783595|ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409029|sp|Q72ZW8|SYV_BACC1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42739524|gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 881

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|320451519|ref|YP_004203615.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151688|gb|ADW23066.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 883

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 13/211 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+   H+GH     + DVLARF ++ G +VL   G D  G     AA   
Sbjct: 39  KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYEVLHPMGWDAFGLPAENAALKF 98

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  + +  +N R  ++  +++ I Y  D  + T E  ++   + ++ K+ +KG  Y+  
Sbjct: 99  GLHPRDWTYENIRQAKESLELMGILYDWDREVTTCEPDYYRFNQWIFLKMWEKGLAYRAK 158

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES- 182
               +  R +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E  
Sbjct: 159 GLVNWCPRCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLEDLEGL 215

Query: 183 -HPEFILPIER----RNE--VISFVKSGLKD 206
             PE +  ++R    R+E   I F   GLK+
Sbjct: 216 DWPEKVKAMQRAWIGRSEGAEIEFPVEGLKE 246


>gi|257470691|ref|ZP_05634781.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064897|ref|ZP_07929382.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690573|gb|EFS27408.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 869

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G    V+   N  N +    +L  SYD    I +    ++   + ++K++ +KG IY 
Sbjct: 92  QNGAHPAVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGLIYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W    +    N+    +  DG+ +      V   E E +FF+++ Y D+LL  +
Sbjct: 152 KKSLVNWCPDCNTVLANE----QVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGH 207

Query: 181 ----ESHPEFILPIER 192
               +  PE +L +++
Sbjct: 208 KEIKDGWPEKVLTMQK 223



 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 89/188 (47%), Gaps = 27/188 (14%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++ K EK+SKS  N +DP E++E+ G D  R F++      K+  ++++GL         
Sbjct: 615 LISKIEKMSKSKNNGVDPEEMVEKYGADTTRLFIMFAAPPEKELEWNENGLA-------- 666

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEIRENMQNQL-IH 411
            G    +++   ++++  + M       T     D++++   ++ ++++ E+++N    +
Sbjct: 667 -GAYRFLTKIWRLVMEHKENMEFGEINLTVVSREDKALIIKLNQTIKKVTESIENDYHFN 725

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVP 467
            ++A  + L++E   +          KTN   A    S    +  EV+R + ++L  F P
Sbjct: 726 TSIAATMELINETQDF----------KTNIIEAGKSTSESKKIFGEVVRNIILMLSPFTP 775

Query: 468 KLANKIFD 475
              + +++
Sbjct: 776 HFCDDLWE 783


>gi|229169200|ref|ZP_04296914.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614266|gb|EEK71377.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 881

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       KF+  D
Sbjct: 422 WYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+RYFL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D  +  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEVAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
          +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G
Sbjct: 43 TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEG 99


>gi|255082165|ref|XP_002508301.1| predicted protein [Micromonas sp. RCC299]
 gi|226523577|gb|ACO69559.1| predicted protein [Micromonas sp. RCC299]
          Length = 941

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +      AKF+P  +   G DIL F    +   ++ ++  L
Sbjct: 487 VLDTWFSSGLWPFSTLGWPNEEAADLAKFFPTQVMETGHDILFFWVARMVMMSYGMTGKL 546

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    VF HG +   KG K+SKSLGNV+DP+ VI+E G DALR+ L    A G+D   + 
Sbjct: 547 PF-HTVFLHGLVRDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQDLNLNM 605

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           D L    N +  N I N    S   +L   +GM
Sbjct: 606 DRLAS--NRNFTNKIWN----SGKFVLYSLEGM 632


>gi|327183314|gb|AEA31761.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 879

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTAGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L +  
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPEVSKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|315038034|ref|YP_004031602.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276167|gb|ADQ58807.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 879

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTAGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L +  
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPEVSKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      +
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDDKGAFYHIKY 204


>gi|319937416|ref|ZP_08011823.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807782|gb|EFW04375.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 876

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 23/271 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P D  V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPNTESEMFKRYFPTDTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG I   +G K+SKSLGN +DP++VI+E G D LR+FL    A G D  
Sbjct: 499 THERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTE---SDESILSVCSR 396
           Y  + L+   N    N I N    S   +L + D  M     +FT    SD+ IL+  + 
Sbjct: 559 YIPEKLEASWN--FINKIWN----SARFVLMNIDEDMKYEDLSFTYLNLSDQWILNRLND 612

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           V++ + ENM         +++ + + +     Y +  K   L   N           V V
Sbjct: 613 VIRSVDENMDKFEFVNVGSELYNFIWDDFCSWYIELSKA-HLNSDNDTEKRATQETLVYV 671

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +  +  LL  F+P +  +I+  +   +E+ C
Sbjct: 672 LNAIVRLLHPFMPFVTEEIYQSIPHLEESIC 702



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 31/175 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R+ R+ G D L+  G D  G      A  A V
Sbjct: 38  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGFDALWLPGMDHAG-----IATQAKV 92

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             ++  D  SR       F + A      Y   IR                 T ++   +
Sbjct: 93  EARMREDGLSRYDLGREKFLEKAWSWKEEYASIIRNQWEKLGLSLDYSKERFTLDEGLSE 152

Query: 105 TCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             + ++  + +KG IY+G     W  ++  A  N + ++K  +G  Y  ++  V+
Sbjct: 153 AVKTVFITLYEKGLIYQGERIINWDPVQRTALSNIEVIHKEIEGHMYYFKYKVVE 207


>gi|206975955|ref|ZP_03236865.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961947|ref|YP_002340517.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097904|ref|YP_002531961.1| valyl-tRNA synthetase [Bacillus cereus Q1]
 gi|206745707|gb|EDZ57104.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067118|gb|ACJ81368.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241962|gb|ACM14672.1| valyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 881

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|85114097|ref|XP_964638.1| hypothetical protein NCU07451 [Neurospora crassa OR74A]
 gi|28926427|gb|EAA35402.1| hypothetical protein NCU07451 [Neurospora crassa OR74A]
          Length = 663

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 32/304 (10%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP------DDPQY---IMYVWIDALTNYLT-TTGYLD- 246
           S++ +GLK   ++R    WG+ IP       D +Y   + YVW DA   Y + T  Y D 
Sbjct: 251 SWINNGLKPRGITRD-LKWGVPIPKGLEGLSDEEYANKVFYVWFDACIGYASITKCYTDE 309

Query: 247 -NPDGSKAKFW---PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFIL 297
            N +G   + W   P ++     +GKD + FH I +P   L       +   + +  ++ 
Sbjct: 310 GNLEGRNWEKWWKNPDNVTLYQFMGKDNVPFHTIIFPGTQLGTKEKWTQVNHLSTTEYLN 369

Query: 298 HKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           ++G K SKS G  V         +  D  RY+L+       D  +  +      N DL  
Sbjct: 370 YEGGKFSKSKGVGVFGNNARDTGIDPDVWRYYLLSRRPESGDSEFKWEEFIDSNNNDLLK 429

Query: 357 GIGNLVSRSVSMILKDYDGMIP----TP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            +GNL  R V       D  +P    TP  +  E  E I    +++L+E  E ++   + 
Sbjct: 430 NLGNLCQRVVKFCQAKLDAKVPEYPKTPIASLDEYKEEI----NKLLKEYNEQVKGTKLR 485

Query: 412 RALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             LA V+S+ +  ++   D +   +L    P+R + V+   + ++  +A +L  ++P  A
Sbjct: 486 AGLATVLSISAVGNKLLQDNKLSNQLLTEEPERCNAVINFALNLLHLIAGVLSPYMPGTA 545

Query: 471 NKIF 474
             I 
Sbjct: 546 QSIL 549



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +E + I++A+ Y N  PH+G+    ++ ADV ARF R  GL  L+  G+DE+G      A
Sbjct: 14  KENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTLYICGSDEYGTATETKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            + GV       +     +D+ D   IS+D F RT    H
Sbjct: 74  LSEGVDPATLCAKYHALHKDVYDWFRISFDKFGRTPTDEH 113


>gi|229087021|ref|ZP_04219175.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696284|gb|EEL49115.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 881

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVELQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +  D    +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNENDEDFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ +   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDRTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A
Sbjct: 38  EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQA 95

Query: 63  QNAGVTTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRH 102
           +  G   +  +   D     F + A      Y   IR                 T ++  
Sbjct: 96  KVEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIREQWGKVGLGLDYTRERFTLDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            D    ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 156 SDAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|154249040|ref|YP_001409865.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769323|sp|A7HJX5|SYV_FERNB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|154152976|gb|ABS60208.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 867

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 28/269 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+ +  PD  +  ++P D+ V G DI+ F    W A ++     
Sbjct: 445 VLDTWFSSALWPFSTMGWPEKTPDLER--YYPTDVLVTGFDIIFF----WVARMIMMGYE 498

Query: 286 LP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                  K+V+ H  +  K G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D 
Sbjct: 499 FMDEKPFKEVYIHQLVRDKYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDL 558

Query: 340 FYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
             D    D  KK      AN I N  +R V M L+D++ +         SD+ ILS   +
Sbjct: 559 KLDVRFFDTYKK-----FANKIWN-ATRFVLMNLEDFEKVDIKLSKLKLSDKWILSRLQK 612

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +Q+I E + +   + A  ++ +   +   D Y +A K     +   +    V  V V V
Sbjct: 613 TIQKISEALDSYDFNIAANEIYNFFWDELCDWYIEAVK----NRLKTEERKVVQNVLVYV 668

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +     LL  F+P L  +++  L  + E+
Sbjct: 669 LDMSLRLLHPFMPFLTEELWTKLPTSGES 697



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 35/173 (20%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA  + I D+L+R+ R+ G DVL+  G D  G     A +    
Sbjct: 36  SIVIPPPNITGKIHMGHALNITIQDILSRYKRMKGFDVLWLPGEDHAGIATQTAVER--- 92

Query: 68  TTKVFVDQNSRNFRDMA--DVLDISYD--------------------DFIR---TTEKRH 102
               ++    ++ RD +  + L+I ++                    D+ R   T ++  
Sbjct: 93  ----YLSTQGKSRRDFSRDEFLNIVWNWANKYRQEIKNQIMSIGASVDWTRERFTLDEGL 148

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
               R ++  +  KG IYKG Y   +  R     +D+EV Y   +G  Y+ ++
Sbjct: 149 SKAVRKVFVDMYKKGLIYKGKYIVNWCHRCGTVLSDEEVDYHEEEGALYHIKY 201


>gi|110004402|emb|CAK98740.1| probable valyl-trna synthetase protein [Spiroplasma citri]
          Length = 888

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 82/370 (22%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++  + +K++ +  S  +      R N  +      ++D  +SR+ + WG +IP   
Sbjct: 363 WFVKMEYFAEKIIKFQSSTNKIQFYPPRFNITLINWMKNVQDWCISRQLW-WGHQIPAWY 421

Query: 222 --DDPQYI-------------------MYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD 259
             DD   I                   +  W  +    +T+ G+  N D    + ++P +
Sbjct: 422 YKDDSTKIHVGLTPPDNSKNWIQDADVLDTWFSSALWPMTSLGW--NWDKKLFQHYFPTN 479

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDP 313
           + V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN +DP
Sbjct: 480 VLVTGYDIIFF----WVSRMMFESLEFTKEKPFNDVLIHGLIRDEEGRKMSKSLGNGVDP 535

Query: 314 IEVIEEVGVDALRYFLVREIACGKD------------GFYDKDGLKKR-VNADLANGIGN 360
           ++VI+E G D LRYFLV   A G+D             F +K     R V  +L N    
Sbjct: 536 MDVIKEYGADTLRYFLVTNSAPGQDLRFSLEKVNSAWNFINKLWNAARYVEMNLTNNFKP 595

Query: 361 LVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ---LIHRAL 414
           LV+  +   +++L   +  I         D+ ILS  ++ + +++ NM+     L+ + L
Sbjct: 596 LVNFEIEIKNLLLNHQENAI---------DQWILSELAKTITKVQTNMEKYEFVLVGKDL 646

Query: 415 AQVISLVSEVDRYFDAQKPW--ELKKTN-PDRASTVLYVTVE----VIRQLAILLQAFVP 467
                     D  ++    W  EL K N     +T+  V+ +    V++Q+ I+L  F+P
Sbjct: 647 ---------YDFVWNKLCSWYIELTKVNLQSNNATIKMVSTQTLFYVLKQILIMLHPFIP 697

Query: 468 KLANKIFDIL 477
            +  +I+  L
Sbjct: 698 FVTEEIYQKL 707



 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 26/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAG 66
           S  I  PN   + H+GHA++  + D++ R+ +L G D L+  G D  G    AK  +   
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDLIIRYKKLLGFDTLYLPGMDHAGIATQAKVEERLC 99

Query: 67  VTTKV---------FVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTC 106
           VT  +         F++Q      + A++           LD S + F  T         
Sbjct: 100 VTKNILRHDLGREKFIEQVWAWKEEYAEIIREQWAKLGLALDYSREQF--TLNNNLSAAV 157

Query: 107 RILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYY 150
           + ++  +  KG IY+G     W  ++  A  N + +Y+   G+ Y
Sbjct: 158 QKVFIDLYQKGLIYRGKRIISWDPVQKTALSNIEVIYQEQQGKMY 202


>gi|83951105|ref|ZP_00959838.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83839004|gb|EAP78300.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 964

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 19/269 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +    + T G+ +  +  K +++P    V G+DIL F    W 
Sbjct: 526 GVTLTRDPD-VLDTWFSSGLWPIGTLGWPEETEEYK-RYFPTSTLVTGQDILFF----WV 579

Query: 277 AFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L +  +V     + HG +   KG+K+SKS GNVIDP+E+I+E G DALR+   
Sbjct: 580 ARMMMMQLAVVDQVPFDTVYLHGLVRDAKGKKMSKSTGNVIDPLEIIDEYGADALRFTNA 639

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              + G  G    D  +     +    + N    +        DG IPTP A    +  I
Sbjct: 640 AMASLG--GVLKLDMQRIAGYRNFGTKLWNAARFAEMNGATGSDGQIPTPEATV--NRWI 695

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
           +   ++V Q + E ++    + A   +   V     D Y +  KP  L   +  +A T  
Sbjct: 696 IGETAKVRQVVDEALETFRFNDAAQALYGFVWGKVCDWYVEFSKPLLLDGDDATKAETQA 755

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   VI Q  ILL   +P +  +++  L
Sbjct: 756 TMAW-VIDQCLILLHPIMPFITEELWGTL 783



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 15/88 (17%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+
Sbjct: 40  SIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-----------HAGI 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFI 95
            T++ V++     ++     D S D+F+
Sbjct: 89  ATQMVVERELA--KEGKKRTDFSRDEFL 114


>gi|228991196|ref|ZP_04151154.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228768420|gb|EEM17025.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 1033

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 15/256 (5%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   A L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGVDQTRGWFYSLLAVAALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +P  K+V S G +L  +G+K+SKS GN +DP+E++E+ G DALR+ L+ + A      + 
Sbjct: 572 VPY-KRVLSLGHVLDEQGQKMSKSKGNALDPVELVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  +++   + L + + N+ S  V    L  Y+         T+ DE +LS     ++++
Sbjct: 631 ERTVQE-AKSKLVDTLVNVYSFYVLYTNLDKYNPKEKYEVKRTKLDEWVLSRLHSTVKQV 689

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQ 457
           R  +       A  ++  LV EV  ++      + WE    NP++A+   Y T+ EV+  
Sbjct: 690 RNALDEYQFTNAAREIAVLVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLVT 746

Query: 458 LAILLQAFVPKLANKI 473
           L+ LL  F P +A  I
Sbjct: 747 LSKLLAPFTPFVAEDI 762



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHG 88


>gi|229085157|ref|ZP_04217404.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228698138|gb|EEL50876.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 1035

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 134/259 (51%), Gaps = 21/259 (8%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGVDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +P  K+V S G +L  +G+K+SKS GN +DP+E++E+ G DALR+ L+ + A      + 
Sbjct: 572 VPY-KRVLSLGHVLDEQGQKMSKSKGNALDPVELVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVL 398
           +  +++   + L + + N+ S  V  +  + DG  P  G +    T+ DE +LS      
Sbjct: 631 ERTVQE-AKSKLVDTLVNVYSFYV--LYANLDGYDPK-GKYEVKRTKLDEWVLSRLHSTT 686

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EV 454
           +++R  +++     A  ++ +LV E+  ++      + WE    NP++A+   Y T+ EV
Sbjct: 687 KKVRTALEDYQFTNAAREIAALVDELSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEV 743

Query: 455 IRQLAILLQAFVPKLANKI 473
           +  ++ LL  F P +A  I
Sbjct: 744 LVTVSKLLAPFTPFVAEDI 762



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHG 88


>gi|157879483|pdb|1OBC|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Post-Transfer Editing Substrate Analogue
          Length = 814

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 7/191 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA   
Sbjct: 31  KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKF 90

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  K +   N R  ++   ++ I Y  D  + T E  ++   + ++ K+ +KG  Y+  
Sbjct: 91  GVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAK 150

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE-- 181
               +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   E  
Sbjct: 151 GLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGL 207

Query: 182 SHPEFILPIER 192
           + PE +  ++R
Sbjct: 208 NWPEKVKAMQR 218


>gi|294783024|ref|ZP_06748348.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479902|gb|EFG27679.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 887

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 53/402 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L+++A++   E    A GQ Y  Q   ++      +F ++    +K L    +    ILP
Sbjct: 326 LKEQAFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            +R  ++       ++D  +SR+ + WG +IP                            
Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275
                  + ++  W  +     +T G+   P+ +K    F+P +  V G DI+ F     
Sbjct: 443 DVELSQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARM 499

Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             F +     +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   
Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNT 559

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391
           + G+D  +  D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+
Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL- 448
           S  +   +++ + ++   +  A   V   +     D Y +  K   L   N D+  + L 
Sbjct: 617 SRLNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDNEDKKISKLT 675

Query: 449 --YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             Y+   ++ Q   LL  F+P +  +I+  + V  E    Q 
Sbjct: 676 AQYMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQQ 717


>gi|227524312|ref|ZP_03954361.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088543|gb|EEI23855.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 893

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 27/203 (13%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D+ D  K +++P D  V G DI+ F
Sbjct: 444 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMK-RYFPTDTLVTGYDIIFF 502

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DA
Sbjct: 503 ----WVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 558

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LR+FL      G+D  +  D +    N    N I N  SR V M L   DG+    +P  
Sbjct: 559 LRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL---DGIEKPKLPDK 612

Query: 381 GAFTESDESILSVCSRVLQEIRE 403
             +  SD+ ILS  +  + E+ E
Sbjct: 613 SEWQLSDKWILSRLNTTISEVSE 635


>gi|183219675|ref|YP_001837671.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909811|ref|YP_001961366.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774487|gb|ABZ92788.1| Valine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167778097|gb|ABZ96395.1| Valyl-tRNA synthetase (Valine--tRNA ligase; ValRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 896

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 35/334 (10%)

Query: 158 QWME--EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           +WME   +    R   +  ++ +YY  + + ++  E   E IS  +   K +S+++ T  
Sbjct: 403 EWMENIRDWCISRQLWWGHRIPAYYAPNGDMVVA-ESLEEAISLFEK--KGISVTKDT-- 457

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
             IK  +D   ++  W  +     +  G+ +  +  K +++P  + V G DI+ F    W
Sbjct: 458 --IKQDED---VLDTWFSSGLWPFSVFGWPEKTEELK-QYYPTSVLVTGFDIIFF----W 507

Query: 276 PAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++   L        +KV  HG +  K G+K SKSLGNV+DP++++ + G D+ R+FL
Sbjct: 508 VARMIMNGLKFMGDVPFQKVLIHGLVRDKDGKKFSKSLGNVVDPLDMMSKYGTDSFRFFL 567

Query: 330 VREIACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTE 385
              +  GKD  +D+   DG +        N I N  SR + M L +D+  + P   +  +
Sbjct: 568 AAVLPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFIFMNLPEDFSPIEPNLDSLED 621

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR 443
           +D  IL    ++L    +     L       +   V  S  D Y +  K        P+ 
Sbjct: 622 TDLWILHEFDQMLGRYEKAYSGYLFFEMANAIYDFVWGSFCDWYLELTKARVYGNVTPES 681

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A     V V V+++   LL  F+P +  +I  +L
Sbjct: 682 AEKARQVLVSVLKKSLGLLHPFMPFITEEIHFLL 715


>gi|256027519|ref|ZP_05441353.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 872

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 45  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 104

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 105 QNGTHPVIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 164

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 165 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 221

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 222 EIKDGWPEKVLTMQK 236



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 621 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 678

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++ K  D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 679 WRLVFENSELVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 736

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 737 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 786


>gi|52141048|ref|YP_085781.1| valyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824177|sp|Q633Y6|SYV_BACCZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51974517|gb|AAU16067.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 881

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKDEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +EVIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T ++   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|325087332|gb|EGC40642.1| methionyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 512

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 173/395 (43%), Gaps = 41/395 (10%)

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DI +D F RTT     D  + +++K+ + G + +   +  Y   +E +Y D    +G  
Sbjct: 38  FDIGFDIFGRTTTPLQTDITQDIFRKLYNNGFLKERMTTQLYC--EEHHYADA---RGDQ 92

Query: 147 GQYYNAQHNPVQWMEE----EGY----------FFRLSAYQDKLLSYYE-SHPEFILPIE 191
                    P+Q        +G+          F  L   Q ++  Y++ +      P  
Sbjct: 93  CDMCGQLLEPLQLKNPRCKIDGFAPITKDTKHIFLELDKLQPEVEDYFQKASTNGAWPNN 152

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDN 247
            ++  ++++K GL+  S++R    WG ++P  P Y   ++Y W DA   Y++ T  Y D 
Sbjct: 153 GKSITLAWLKEGLQPRSITRD-MKWGTQVPF-PGYEDKVIYSWFDACIGYVSITAKYTDQ 210

Query: 248 PDGSKAKFW--PADLHV---IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKG 300
            +    K+W  P D+ +   IGKD + FH++ +PA  +    P  K   + +  ++ ++G
Sbjct: 211 WE----KWWRNPEDVQLYQFIGKDNVVFHSVIFPASQIGTRGPWTKVHHLSTTDYLTYEG 266

Query: 301 EKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            K SKS G  +      +  G  D  RY+L+       D  +  D      N+ L N +G
Sbjct: 267 GKFSKSRGIGVFGDSAQQTGGSADVWRYYLLSRRPETGDTEFSWDSFISANNSILLNNLG 326

Query: 360 NLVSRSVSMI-LKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  SR +  +  + Y+ ++P    + E S E+     +R+L +  E +    +   LA  
Sbjct: 327 NFASRVLKFVNSRFYNNIVPNWTRYHEPSFETWKEEINRLLTKYVEVLNTVKLRAGLATA 386

Query: 418 ISLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYVT 451
           + +  + + +    K  + L ++ P + + V+ +T
Sbjct: 387 LHISQQGNLFLQTNKLNDKLHESEPAKCTAVISLT 421


>gi|289765479|ref|ZP_06524857.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717034|gb|EFD81046.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 859

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG IYK
Sbjct: 92  QNGTHPVIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    DG  +      V   E E +FF+++ Y D+LL  +E
Sbjct: 152 KKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHE 208

Query: 182 ----SHPEFILPIER 192
                 PE +L +++
Sbjct: 209 EIKDGWPEKVLTMQK 223



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E++++ G D  R F++      K+  ++++GL           +
Sbjct: 608 KVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRV 665

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             LV  +  ++ K  D +       ++ D+++L   ++ ++++ + ++N    + A+A  
Sbjct: 666 WRLVFENSELVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAAN 723

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV  Y  +         N ++A+ +L  T   ++++ I+L  FVP   ++I++ L
Sbjct: 724 MELINEVQTYVASS-------MNSEQAAKILGYT---LKKIIIMLSPFVPHFCDEIWEEL 773


>gi|317132442|ref|YP_004091756.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470421|gb|ADU27025.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 872

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 38/287 (13%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K G   LS    TFD               W  +     +T G+ +      A F+P  +
Sbjct: 437 KCGGTHLSQDEDTFD--------------TWFSSALWPFSTLGWPEKTP-ELAYFYPTSV 481

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W A ++ + +    +   H  ++H      KG K+SKSLGN +DP+
Sbjct: 482 LVTGYDIIFF----WVARMIFSGIAQTGQTPFHTVLIHGLVRDAKGRKMSKSLGNGVDPL 537

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKD 372
           EVI+  G DALR+ L    A G     D   L +RV +  + AN I N  +R + M +  
Sbjct: 538 EVIKSSGADALRFTL----ATGNSPGNDTRFLPERVESSRNFANKIWN-AARFILMNISG 592

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
            +  +PT       D+ ILS  + +++++ EN++   +  A+ ++   +  S  D Y + 
Sbjct: 593 SETGLPT--ELEIEDKWILSKLNTLIRDVTENLERFELGVAVQKLYDFLWDSFCDWYIEL 650

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K     +   + A+    V V V+     LL   +P +  +I+  L
Sbjct: 651 SK--SRLQAGGENAAAACRVLVWVMEHTLRLLHPVMPFITEEIWQTL 695



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTK 70
           H+GHA+E    D+L RF R+ G + L+  GTD        KI  A    G++ +
Sbjct: 53  HMGHAFEDTQQDILIRFKRMQGFEALWLPGTDHASIATEAKIVAAMAKEGLSKQ 106


>gi|167755851|ref|ZP_02427978.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
 gi|167704790|gb|EDS19369.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
          Length = 873

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P +  V G DI+ F    W + ++  +L  
Sbjct: 444 VLDTWFSSALWPFSTLGWPNTDSELFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLHF 499

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++     V  HG I   +G K+SKSLGN +DP++VI+E G D LR+FL    A G D  
Sbjct: 500 TEERPFEHVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 559

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQ 399
           Y  + L+   N    N I N    S   +L + D  +     F E     L++C + +L 
Sbjct: 560 YIPEKLEASWN--FINKIWN----SARFVLMNIDDEM----KFEELSFDNLNLCDKWILN 609

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW-------ELKKTNPDRASTVLYVT 451
            + E ++   I+    + +++ SE+ ++ +D    W        L  TN       L   
Sbjct: 610 RLNEVIREVDINMDKFEFVNVGSELYKFIWDDFCSWYIELTKVHLNSTNDTEKQASLNTL 669

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           V V+  +  +L  F+P +  +IF  +   +E+ C
Sbjct: 670 VYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESIC 703



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 24/146 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R+ R+ G D L+  G D           +AG+
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMD-----------HAGI 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYKGCY 124
            T+  V+   R   +     D+  D F+    + ++ +    R  W+K+    D  K  +
Sbjct: 88  ATQAKVEARMR--EEGISRYDLGRDGFLEKAWSWKEEYASIIRAQWEKLGLSLDYSKERF 145

Query: 125 S---GWYSLRDEAY---YNDDEVYKG 144
           +   G      E +   YN+  +Y+G
Sbjct: 146 TLDDGLSEAVKEVFVKLYNEGLIYQG 171


>gi|237734819|ref|ZP_04565300.1| valyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382147|gb|EEO32238.1| valyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 874

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P +  V G DI+ F    W + ++  +L  
Sbjct: 445 VLDTWFSSALWPFSTLGWPNTDSELFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLHF 500

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++     V  HG I   +G K+SKSLGN +DP++VI+E G D LR+FL    A G D  
Sbjct: 501 TEERPFEHVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 560

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQ 399
           Y  + L+   N    N I N    S   +L + D  +     F E     L++C + +L 
Sbjct: 561 YIPEKLEASWN--FINKIWN----SARFVLMNIDDEM----KFEELSFDNLNLCDKWILN 610

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW-------ELKKTNPDRASTVLYVT 451
            + E ++   I+    + +++ SE+ ++ +D    W        L  TN       L   
Sbjct: 611 RLNEVIREVDINMDKFEFVNVGSELYKFIWDDFCSWYIELTKVHLNSTNDTEKQASLNTL 670

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           V V+  +  +L  F+P +  +IF  +   +E+ C
Sbjct: 671 VYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESIC 704



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 24/146 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R+ R+ G D L+  G D           +AG+
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMD-----------HAGI 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYKGCY 124
            T+  V+   R   +     D+  D F+    + ++ +    R  W+K+    D  K  +
Sbjct: 89  ATQAKVEARMR--EEGISRYDLGRDGFLEKAWSWKEEYASIIRAQWEKLGLSLDYSKERF 146

Query: 125 S---GWYSLRDEAY---YNDDEVYKG 144
           +   G      E +   YN+  +Y+G
Sbjct: 147 TLDDGLSEAVKEVFVKLYNEGLIYQG 172


>gi|9971928|gb|AAG10490.1|AF279106_52 predicted leucyl-tRNA synthetase (leuS) [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 804

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 10/194 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV++R+ R++  +V    G D  G     AA 
Sbjct: 31  REKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V+ K + +QN  + +     L + YD    +RT E  ++   ++++KK  DKG +Y 
Sbjct: 91  ANKVSPKDWTNQNIEHMKQQLISLGLGYDWSKELRTCEPEYYKWEQLIFKKFYDKGLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W  + DE    +++V  G  G    AQ   V+  E + +F +++ Y ++LL+  
Sbjct: 151 KKSLVNWDPV-DETVLANEQVIDGK-GWRSGAQ---VEIKEIDQWFIKITDYAEELLTSL 205

Query: 181 ES--HPEFILPIER 192
           +    PE +  ++R
Sbjct: 206 DEVDWPENVKTMQR 219



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 10/101 (9%)

Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
            T++   D      +K+W P DL++ G +    H +Y   F        L+  N P  KK
Sbjct: 491 FTSSDNADEMFDKNSKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDMDLVEGNEPF-KK 549

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN +DP   IE+ G D +R +++
Sbjct: 550 LLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMM 590


>gi|297588484|ref|ZP_06947127.1| valine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573857|gb|EFH92578.1| valine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 872

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  V+ +  + +F ++       L  Y++     +P       ++++++ ++D  +SR+ 
Sbjct: 349 HTTVEPLISKQWFVKMDKLAKLALDAYKNEEIRFIPKRFEKVYVNWLEN-IRDWCISRQL 407

Query: 214 FDWGIKIP----------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGS 251
           + WG ++P                 DP+        +  W  +     +T G+ +  +  
Sbjct: 408 W-WGHRLPVYYHNETGEVVVARKNPDPEKYTQDPDTLDTWFSSALWPFSTLGWPNETEDL 466

Query: 252 KAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           K  F+P ++ V G DI+ F  I   + +      +P  K V+  G +   +G K+SKSLG
Sbjct: 467 KY-FFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPF-KDVYLTGLVKDSQGRKMSKSLG 524

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVS 367
           N IDPIEVI++ G DALR+ L+     G D  FY +   K   N +  N + N  SR V 
Sbjct: 525 NGIDPIEVIDQYGADALRFALITGNTPGNDSRFYME---KVEANRNFCNKLWN-ASRFVF 580

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425
           M ++D    I       E D+ I+S  + V+ E+  N+    I  A  ++      V  D
Sbjct: 581 MNVEDEVKNIDDVELQIE-DKWIISSLNDVIDEVSTNLNKYEIGIAAEKIYDFTWNVFCD 639

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP  L   + +   + + V +  +  +  LL  F+P +  +I+  L
Sbjct: 640 WYIELVKP-RLYGDDSNLKESAISVLIYTLTNVIKLLHPFMPYITEEIYSYL 690



 Score = 40.0 bits (92), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D+L R +R+DG   L+  GTD      A  A  A V +K+  +  S+  
Sbjct: 52  HLGHALNNTIQDILIRKNRMDGYSALWVPGTDH-----ASIATEAKVVSKLKEEGKSKES 106

Query: 81  RDMADVLDISYD 92
                 L+ S+D
Sbjct: 107 LGRDGFLEASWD 118


>gi|300769703|ref|ZP_07079586.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181105|ref|YP_003925233.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300492746|gb|EFK27931.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046596|gb|ADN99139.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 889

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 14/195 (7%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G+  P DP+       ++  W  +     +T G+ +       +++P D  V G DI+ F
Sbjct: 439 GVDGPKDPENWEQDPDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTDTLVTGYDIIFF 498

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 499 WVSRMMFQSLEFTGKRPF-KHVLLHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 557

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL      G+D  +    +    N    N I N  SR V M L   D   +P    +T +
Sbjct: 558 FLSNGSTAGQDVRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGTMDKPELPAASDWTLA 614

Query: 387 DESILSVCSRVLQEI 401
           D+ ILS  +  ++++
Sbjct: 615 DKWILSRLNATVKQV 629



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 103

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FV Q             + +  M   LD S + F  T +    D  +
Sbjct: 104 EQGISRYDLGREKFVQQVWDWKDEYASIIKQQWAKMGLSLDYSRERF--TMDDGLSDAVK 161

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 162 KVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 209


>gi|126178353|ref|YP_001046318.1| isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166229750|sp|A3CSI6|SYI_METMJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125861147|gb|ABN56336.1| Isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 1059

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 36/289 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I  VW D+      T G+   P   +A  + WPAD    G+D  R  F++    + +   
Sbjct: 515 IFDVWFDSAVASWATLGF---PREREAFDRLWPADFITEGQDQTRGWFYSQLGASTVAFG 571

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K V  HGF L   G K+SKS GNV+ P EV+ + GVD LR++++   A   D  +
Sbjct: 572 RAPY-KSVLMHGFALDADGRKMSKSFGNVVTPEEVMNQFGVDVLRFYVLWANAPWDDLKF 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF------------TESDE 388
           + D +K  ++  L N + N+    +  M+L  ++      G +             E D 
Sbjct: 631 NWDSVKT-IHRTL-NILWNVYRFPLPYMVLDSFEPAAGDGGLWDGSFVRGNINDMPEEDR 688

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRA 444
            I+S  + + +    +MQ   +HR    + + + E + R Y    +P  W L++ +P++ 
Sbjct: 689 WIISRVNSLARTTAGDMQEYHLHRVTRALAAFILEDLSRWYVQLVRPRMW-LEEDSPEKR 747

Query: 445 ---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
               TV Y    V+R+L  LL  F P +A +I+  L +A +      LD
Sbjct: 748 YAYETVYY----VMRRLVALLAPFTPHIAEEIYGNLRLAGDPESVHMLD 792



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 23/148 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK--- 70
           Y     H+G A+  II D + R+HR+ G +++   G D HG  I  K     G T+K   
Sbjct: 48  YTTGHIHLGTAWNKIIKDTILRYHRMGGRNIIERAGYDMHGLPIEVKVEHQLGFTSKKDI 107

Query: 71  ------VFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
                  F++Q            S  FR +   LD  +DD  +T +  + ++     ++ 
Sbjct: 108 EDYGIAAFIEQCRTFAVTHMEIMSEQFRQLGIWLD--FDDPYQTIKAEYIESAWWAVQRA 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++G + +G     +  R E    D EV
Sbjct: 166 EERGLLERGHRVVNWCPRCETAIADSEV 193


>gi|145350050|ref|XP_001419436.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579667|gb|ABO97729.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 924

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 21/269 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +        F+PA +   G DIL F    +   ++ ++  L
Sbjct: 467 VLDTWFSSGLWPFSTCGWPNEEAPDMKNFFPASVLETGHDILFFWVARMIMMSYGMTGKL 526

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    VF HG +   +G K+SKSLGNV+DP+ VI E G DALR+ L      G+D   + 
Sbjct: 527 PF-HTVFLHGLVRDSQGRKMSKSLGNVVDPLGVIAEQGCDALRFTLATGTTPGQDLNLNL 585

Query: 344 DGLKKRVNADLANGI---GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           + L    N +  N I   G  V  S+  +  D    +   GA   +DE+ ++      + 
Sbjct: 586 ERLAS--NRNFTNKIWNAGKFVLYSMEDMTDDERMALVDEGAALCADEASIAELPLAERW 643

Query: 401 IRENMQNQLIHRALAQVISLVSEVDR-----YFDAQKPWELKKT-------NPDRASTVL 448
           I   +   + H   AQ      E  R     ++D+   W ++         + D A    
Sbjct: 644 IVSKLNATVDHVTAAQDKYDFGEAGRSTYTFFYDSFADWFIEGAKSRTYGDDADAARVTK 703

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            VT+ V+ Q   LL  FVP +  +++  L
Sbjct: 704 AVTLYVLDQTLRLLHPFVPYVTEEVWQAL 732


>gi|325678885|ref|ZP_08158483.1| valine--tRNA ligase [Ruminococcus albus 8]
 gi|324109389|gb|EGC03607.1| valine--tRNA ligase [Ruminococcus albus 8]
          Length = 897

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 54/363 (14%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H+ ++ M  + +F ++    +  +   E      +P       +++++ G +D  +SR+ 
Sbjct: 373 HSTIEPMISKQWFVKMKPLAEPAIQAVEEGKIKFVPERFTKTYLNWMR-GTRDWCISRQL 431

Query: 214 FDWGIKIP----DDPQYI------------------------MYVWIDALTNYLTTTGYL 245
           + WG +IP    DD   I                        +  W  +     +  G+ 
Sbjct: 432 W-WGHRIPAWYCDDCGEINVAKSAPCKCKKCGSTNLTQDEDSLDTWFSSALWPFSILGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HK 299
           D        F+P    V G DI+ F    W + ++ + L    K     V  HG +   +
Sbjct: 491 DKQSDDFNYFYPTSTLVTGYDIIGF----WVSRMIFSGLAYTGKAPFDTVLIHGIVRDSQ 546

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+ VI++ G DALR+ LV+  + G D  Y ++ +    N    N I 
Sbjct: 547 GRKMSKSLGNGIDPLVVIDQYGADALRFMLVQGSSPGNDMRYSEEKIVAMRN--FTNKIW 604

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    S  +++      I  P   T  D+ ILS  ++V +E+  N+++  +  A  +V  
Sbjct: 605 NA---SRFLLMNMTIDKIELPKELTLEDKWILSSLNKVAKEVTYNLEHFEMGVAAQKVYD 661

Query: 420 LV--SEVDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  S  D Y +  K     + N D A     V  V   V+  +  LL  F+P +  +I+
Sbjct: 662 FIWNSFCDWYIELAK----NRFNGDDAQAKKNVENVLAYVLTDILKLLHPFMPFITEEIY 717

Query: 475 DIL 477
             L
Sbjct: 718 QAL 720



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 29/191 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S A+  PN   Q H+GHA +  + D+L RF R+ G   L+  GTD        KI +A +
Sbjct: 39  SIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALWIPGTDHAAIATEAKIVEAMR 98

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T                 + F  +     R +    D   + F  T +++      
Sbjct: 99  QEGLTKADLGREKFMERAWAWKEKFGGRIVEQLRTLGTSCDWEREHF--TMDEQCSKAVL 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166
            ++ K+ ++G IY+G     +  + +   +D EV Y+  DG +++  +     ++E G F
Sbjct: 157 EVFVKLYEEGLIYRGNRMVNWCPKCQTSISDAEVEYENKDGNFWHILYK----VKETGEF 212

Query: 167 FRLSAYQDKLL 177
             ++  + + +
Sbjct: 213 LEIATTRPETM 223


>gi|14590903|ref|NP_142976.1| isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647822|sp|O58792|SYI_PYRHO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3257481|dbj|BAA30164.1| 1066aa long hypothetical isoleucyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 1066

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 131/258 (50%), Gaps = 14/258 (5%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLPLPK 288
           VW D+      + GY  N +  + K WPAD  V G+D + ++      A +++ +    +
Sbjct: 552 VWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYR 610

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +V  HG++L  KG+K+SKSLGN+I P EV+E+ G D  R++++      ++  +   G++
Sbjct: 611 RVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVE 670

Query: 348 KRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIREN 404
           +     + N + N+   S + M L ++D   +     AF E D+ ILS  + +++E+   
Sbjct: 671 Q--VRRMLNILWNVYVLSATYMSLDNFDPRNVKVEELAFREEDKWILSRVNSLIREVENG 728

Query: 405 MQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++   + +A   + + V E + R++     ++ W ++  +PD+ +   Y   +V   L  
Sbjct: 729 IETFYLTKATRALYNFVVEDLSRWYVRLIRKRLW-VEGDDPDKLAA-YYTLWKVFDVLLR 786

Query: 461 LLQAFVPKLANKIFDILF 478
           L+  F P +  +I+  L 
Sbjct: 787 LMAPFTPYITEEIYQNLM 804



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGFDMHGLPIEVKVEQA 100

Query: 65  AGVTTKVFVDQN 76
            G+ TK  +++ 
Sbjct: 101 LGLKTKKEIEEK 112


>gi|228923211|ref|ZP_04086501.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836417|gb|EEM81768.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 881

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|207108940|ref|ZP_03243102.1| methionyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 228

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 95/170 (55%), Gaps = 2/170 (1%)

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL++R
Sbjct: 1   KSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNLLNR 60

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K ++  + +    T      L    ++L      +    +H+AL ++ ++   +
Sbjct: 61  LLGMAKKYFNHSLKS-AKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNVYDFL 119

Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+
Sbjct: 120 NKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSATKL 169


>gi|329667571|gb|AEB93519.1| valyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 879

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K+L   ++  +     ER    +    S + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDENSEDFKRYFPTNT 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K     V  HG I   +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V++E G DALR+FL+   A G+D  YD   +    N    N I N  SR V M L +  
Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    +  + E+
Sbjct: 591 QPAHMPDTSKFDLADSWIFDRLNHTVSEV 619



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      R
Sbjct: 99  TQGKDRHEMGREAFVKQVWDWKDEYAAIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204


>gi|189083229|sp|A6WRJ9|SYL_SHEB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 208 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|268319720|ref|YP_003293376.1| hypothetical protein FI9785_1249 [Lactobacillus johnsonii FI9785]
 gi|262398095|emb|CAX67109.1| valS [Lactobacillus johnsonii FI9785]
          Length = 879

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K+L   ++  +     ER    +    S + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGEIYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDEDSEDFKRYFPTNT 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K     V  HG I   +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V++E G DALR+FL+   A G+D  YD   +    N    N I N  SR V M L +  
Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    +  + E+
Sbjct: 591 KPAHMPDTSKFDLADSWIFDRLNHTVSEV 619



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      R
Sbjct: 99  TQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204


>gi|186684785|ref|YP_001867981.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186467237|gb|ACC83038.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 994

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 26/301 (8%)

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK- 252
           N      KS  +    ++  F   +K+  DP  ++  W  +     +T G+   P+ ++ 
Sbjct: 434 NTPFVVAKSETEAWEKAKSQFGENVKLEQDPD-VLDTWFSSGLWPFSTLGW---PEQTQD 489

Query: 253 -AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKIS 304
            A ++P    V G DI+ F    W A +       +  +P  + V+ HG +L  KG+K+S
Sbjct: 490 LATYYPTTTLVTGFDIIFF----WVARMTMMAGHFTQQMPF-QTVYIHGLVLDEKGQKMS 544

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLV 362
           K+ GN IDP+ +I++ G DALRY L+RE+A  G+D   + D  K +  + + +    N +
Sbjct: 545 KTKGNGIDPLLLIDKYGTDALRYTLIREVAGAGQDIRLEYDRKKDESASVEASRNFANKL 604

Query: 363 SRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             +   ++ + DG  P     P A   SD  I+S   +V+++    + N  +  A   + 
Sbjct: 605 WNAARFVMMNLDGQTPQQLGNPVATELSDRWIISRYHQVIKQTSNYIDNYGLGEAAKGLY 664

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     D+Y +  K       +P            ++  +  LL   +P +  +I+  
Sbjct: 665 EFIWGDFCDQYIELVKSRLQADADPVSRRVAQQTLGYILEGILKLLHPLMPHITEEIWQT 724

Query: 477 L 477
           L
Sbjct: 725 L 725



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFESALIDTLVRYHRMQGRNTLWLPGTD 87


>gi|218133173|ref|ZP_03461977.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992046|gb|EEC58050.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC
           43243]
          Length = 893

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   +  +      P  K +F HG +   +G K+SKSLGN I
Sbjct: 475 FYPTDVLVTGYDIIFFWVIRMIFSGYEHMGEKPFGKVLF-HGLVRDSQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
           DP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N       +
Sbjct: 534 DPLEVIDKYGADALRLTLITGNAPGNDMRFY-----WERVEASRNFANKVWNATR---FI 585

Query: 369 ILKDYDGMIPT-----------------PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           ++ D +G I                   P   T +D+ ILS  ++V+ E+ ENM+   + 
Sbjct: 586 MMNDPEGRIKPGNIKVNGNGGSSSAYKLPENLTAADKWILSRMNKVVAEVTENMEKYELG 645

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A++++   + +   D Y +  KP      +  + + V  +   ++  L  +L  ++P +
Sbjct: 646 IAVSKLQDFIWDEFCDWYIEMVKPRLYNDEDTTKDAAVWTLKTVLVDALK-MLHPYMPFV 704

Query: 470 ANKIF 474
             +IF
Sbjct: 705 TEEIF 709



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +R K   +  +  PN   + H+GHA +  + D+L RF R+ G + L+  GTD
Sbjct: 33 DRSKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRFKRMQGYEALWIPGTD 84


>gi|75909191|ref|YP_323487.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702916|gb|ABA22592.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 1002

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 24/290 (8%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDIL 268
           ++  F   +++  DP  ++  W  +     +T G+ +  PD   AK++P    V G DI+
Sbjct: 450 AKAQFGENVQLEQDPD-VLDTWFSSGLWPFSTLGWPEQTPD--LAKYYPTTTLVTGFDII 506

Query: 269 RFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321
            F    W A +       +  +P  + V+ HG +     +K+SKS  N IDP+ +I++ G
Sbjct: 507 FF----WVARMTMMAGHFTGQMPF-QTVYIHGLVRDENNKKMSKSANNGIDPLLLIDKYG 561

Query: 322 VDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
            DALRY LVRE+A  G+D   + D  K +  + + +    N +  +   ++ + DG  P 
Sbjct: 562 TDALRYTLVREVAGAGQDIRLEYDRKKDESPSVEASRNFANKLWNAARFVMMNLDGQTPG 621

Query: 379 ---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
               P A   SD  I+S   +V+++    + N  +  A   +   +     D Y +  K 
Sbjct: 622 QLGQPNATELSDRWIISRYHQVIKQTTNYIDNYGLGEAAKGIYEFIWGDFCDWYIELVKS 681

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              K  +P            V+  +  LL  F+P +  +I+  L    EN
Sbjct: 682 RLQKDADPLSRKAAQQTLAYVLEGILKLLHPFMPHITEEIWQTLTQQPEN 731



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFESALIDTLVRYHRMQGRNTLWLPGTD 87


>gi|228954741|ref|ZP_04116763.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229192669|ref|ZP_04319628.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590759|gb|EEK48619.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228804939|gb|EEM51536.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 867

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|206969837|ref|ZP_03230791.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218233729|ref|YP_002369265.1| valyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229071967|ref|ZP_04205177.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206735525|gb|EDZ52693.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218161686|gb|ACK61678.1| valine--tRNA ligase [Bacillus cereus B4264]
 gi|228711126|gb|EEL63091.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 881

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|153001820|ref|YP_001367501.1| leucyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151366438|gb|ABS09438.1| leucyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 874

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 47  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 107 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 167 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 222

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 223 TLDGWPEQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 278


>gi|229552054|ref|ZP_04440779.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229314571|gb|EEN80544.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 901

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++  
Sbjct: 465 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 519

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 520 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 579

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +
Sbjct: 580 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 636

Query: 396 RVLQEI 401
             ++++
Sbjct: 637 ETIKQV 642



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 62  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 121

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 122 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 179

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 180 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 227


>gi|229123998|ref|ZP_04253190.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228659300|gb|EEL14948.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 881

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|288574913|ref|ZP_06393270.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570654|gb|EFC92211.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 887

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 16/264 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  +     F+P  L V G DI+ F    W + ++   L  
Sbjct: 453 VLDTWFSSALWPFSTLGWPDKTE-ELEHFYPTSLMVTGFDIIFF----WVSRMIMMGLEF 507

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V+ H  +   +G+K+SKS GNVIDP+ +I++ G DALR+ +      G+D  
Sbjct: 508 MDEIPFNDVYIHALVRDEQGQKMSKSKGNVIDPLIMIDQFGADALRFTVAALTMPGRDIL 567

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                ++   +    N I N  SR   M L D D   P        D+ I+   S+V  +
Sbjct: 568 LSPSKIENYRH--FLNKIWN-ASRFALMNLGDSDPSRPDEKDLRLHDKWIMDRLSKVNSQ 624

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + + +   LI  A   +   +     D Y +  KP        DR    L+V ++V ++ 
Sbjct: 625 VTDYLDEYLIGDAARLLYDFIWGDLCDWYVEMSKPALWGDEGEDRKEATLWVLLDVFKET 684

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
             LL  F+P L  +++       E
Sbjct: 685 LSLLHPFIPFLTEELWQAFGFGQE 708



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 26/162 (16%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++EK   S  I  PN     H+GHA+     D++ R+ R+ G +VL+  GTD  G     
Sbjct: 36  DKEKEAFSIVIPPPNVTGSLHMGHAFNNTFQDIICRYKRMRGYNVLWLPGTDHAGIATQN 95

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC---------- 106
            + +     G++     D +  +F D        Y + I   +K+  ++C          
Sbjct: 96  VVERELAKEGISRH---DMSREDFIDRVWAWKEEYGNRIINQQKKLGNSCDWRRLRFTMD 152

Query: 107 -------RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  R ++ ++ +KG IY+G Y   +  R +   +D EV
Sbjct: 153 EGLSKAVRAVFVRLYEKGLIYRGKYIINWCPRCQTALSDLEV 194


>gi|149915811|ref|ZP_01904336.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810393|gb|EDM70238.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 975

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 18/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +    + T G+ D+ +  K K++P  + + G DI+ F    W A ++     +
Sbjct: 545 VLDTWFSSGLWPIGTLGWPDDTEELK-KYFPTSVLITGFDIIFF----WVARMMMMQYAV 599

Query: 287 -PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +K FSH ++       KG+K+SKSLGNV+DP+++I++ G DA+R+ L    A G+D  
Sbjct: 600 VGQKPFSHVYVHALVRDEKGKKMSKSLGNVLDPLDLIDDYGADAVRFTLTAMAAMGRDLK 659

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             KD +    N      + N    +        DG IP P A    ++ I+   ++V + 
Sbjct: 660 LSKDRIAGYRN--FTTKLWNAARFAEMNGATSSDGTIPQPDATV--NKWIIGETAKVRET 715

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E +     + A   + + V     D Y +  KP  L   +  RA T   +   VI Q 
Sbjct: 716 VDEALAAFRFNDAANALYAFVWGKVCDWYVEFSKPLLLDGDDATRAETQATMAW-VIDQC 774

Query: 459 AILLQAFVPKLANKIFDIL 477
            ILL   +P +  +++  L
Sbjct: 775 LILLHPIMPFVTEELWGTL 793



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 25/87 (28%)

Query: 3  EREKLYISTAIAYPNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFT 48
          E+   + + A A P A+P              H+GHA+   + D+L R+HR+ G D L+ 
Sbjct: 21 EQTGAFKAGANARPGAEPFCIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGDDTLWQ 80

Query: 49 TGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           G D           +AG+ T++ V++
Sbjct: 81 PGQD-----------HAGIATQMVVER 96


>gi|30022546|ref|NP_834177.1| valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048175|ref|ZP_04193744.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111929|ref|ZP_04241473.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504949|ref|YP_003666649.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433513|sp|Q817R6|SYV_BACCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29898104|gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228671493|gb|EEL26793.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723162|gb|EEL74538.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326001|gb|ADH08929.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 881

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|229152660|ref|ZP_04280848.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630806|gb|EEK87447.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 867

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPVDIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|228960734|ref|ZP_04122373.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229129750|ref|ZP_04258717.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147028|ref|ZP_04275388.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180734|ref|ZP_04308072.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602712|gb|EEK60195.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636416|gb|EEK92886.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653666|gb|EEL09537.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798950|gb|EEM45925.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 867

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|259649574|dbj|BAI41736.1| valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 901

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++   L  
Sbjct: 468 VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQGLHF 523

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D  
Sbjct: 524 THQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDTR 583

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQ 399
           +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  ++
Sbjct: 584 FSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETIK 640

Query: 400 EI 401
           ++
Sbjct: 641 QV 642



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 62  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 121

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 122 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 179

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 180 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 227


>gi|229081723|ref|ZP_04214216.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701568|gb|EEL54061.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 867

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|161507301|ref|YP_001577255.1| valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348290|gb|ABX26964.1| Valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 879

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPSDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPDVSKFDLSDRWIFDRLNHTVSEV 619



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAG 86


>gi|154151808|ref|YP_001405426.1| isoleucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166229748|sp|A7IAM2|SYI_METB6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154000360|gb|ABS56783.1| isoleucyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 1076

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 21/281 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I  VW D+      T G+    D  + K WPAD    G+D  R  F++    + +     
Sbjct: 515 IFDVWFDSAVASWATVGFPAKTDEFE-KLWPADFITEGQDQTRGWFYSQLGASTIAFGKA 573

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HGF L  +G K+SKSLGNV+ P EVI +VGVD LR +++   A   D  ++ 
Sbjct: 574 PY-KSVCMHGFALDAEGRKMSKSLGNVVAPEEVIAKVGVDVLRLYVLSSSAPWDDLKFNW 632

Query: 344 DGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTP---GAFTES--------DESIL 391
           DG+   VN  + N + N+    +  MIL  ++    +    G+F  S        D  I+
Sbjct: 633 DGIAT-VNRTM-NILWNVYRFPMPYMILDRFEPEAKSGHWDGSFVRSHIRELPDEDRWIV 690

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYV 450
           S  + V   +  + +   +HRA  ++++ + E + R++       +            Y 
Sbjct: 691 SRINTVAGIVDASTKECQLHRATREILNFILEDLSRWYVQLVRPRMWLEGESEQKIFAYE 750

Query: 451 TV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           T+  V+R+L  L+  F P +  +I+  L   ++      LD
Sbjct: 751 TIYYVMRRLVDLMAPFAPHITEEIYSNLRCKNDPGSVHMLD 791



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK 70
           Y   Q H+G A+  II D + R+HR++G +V+   G D HG  I  K  Q  G  +K
Sbjct: 48  YTTGQIHLGTAWNKIIKDSILRYHRMNGRNVIDRAGYDMHGLPIEVKVEQKLGFASK 104


>gi|47779360|gb|AAT38589.1| predicted leucyl tRNA synthetase [uncultured gamma proteobacterium
           eBACHOT4E07]
          Length = 801

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 6/181 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y  +   YP+ + H+GH     I DV++R+ R+   +V    G D  G     AA
Sbjct: 30  KREKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMKNFNVFQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V+ + + +QN  N +     L  SYD    +RT +  ++   ++++KK  D G +Y
Sbjct: 90  IANKVSPEDWTNQNIENMKSQLQSLGFSYDWSKELRTCDSSYYKWEQLIFKKFYDAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G  G    AQ   ++  E + +F +++ Y D+LLS  
Sbjct: 150 RKKSMVNWDPEDKTVLANEQVIDGK-GWRSGAQ---IEIKEIDQWFIKITDYADELLSSL 205

Query: 181 E 181
           E
Sbjct: 206 E 206



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
            K+W P DL++ G +    H +Y   F        L+  + P  K++ + G +L  G K+
Sbjct: 504 TKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDIGLVEGDEPF-KRLLTQGMVLKDGAKM 562

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330
           SKS GN +DP   IE+ G D +R +++
Sbjct: 563 SKSKGNTVDPQSYIEKYGADTVRLYMM 589


>gi|227889741|ref|ZP_04007546.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849605|gb|EEJ59691.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 879

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K+L   ++  +     ER    +    S + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDEDSEDFKRYFPTNT 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K     V  HG I   +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V++E G DALR+FL+   A G+D  YD   +    N    N I N  SR V M L +  
Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    +  + E+
Sbjct: 591 KPAHMPDTSKFDLADSWIFDRLNHTVSEV 619



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      R
Sbjct: 99  TQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204


>gi|260102647|ref|ZP_05752884.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083552|gb|EEW67672.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 879

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPSDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPDVSKFDLSDRWIFDRLNHTVSEV 619



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYIPGMDHAG 86


>gi|258539468|ref|YP_003173967.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151144|emb|CAR90116.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 880

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++  
Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 499 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +
Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 615

Query: 396 RVLQEI 401
             ++++
Sbjct: 616 ETIKQV 621



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 101 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 158

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 159 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 206


>gi|15895665|ref|NP_349014.1| valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81529863|sp|Q97GG8|SYV_CLOAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15025413|gb|AAK80354.1|AE007740_1 Valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509815|gb|ADZ21451.1| valyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 881

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 22/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  +  +  F+P D  V G DI+ F    W A ++ + +  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKNEDLEY-FYPTDTLVTGYDIIFF----WVARMVFSGIYN 505

Query: 285 --PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P K V+ HG +   +G K+SKSLGN +DP++VI+  G DALR+ L+   A G D  
Sbjct: 506 MGEVPFKHVYIHGLVRDAEGRKMSKSLGNGVDPLDVIDTFGADALRFMLITGNAPGNDIR 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N   AN I N  SR V M L K+          ++ +D  ILS C+ +++
Sbjct: 566 YKTEKVEAARN--FANKIWN-ASRFVLMNLDKEIMDKYKDLEEYSLADRWILSRCNSLVR 622

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVI 455
           E+ +N++   +  A  +V   +     D Y +  KP    +    +  A  VLY  + V 
Sbjct: 623 EVTDNIEKFELGIASQKVYDFMWNEFCDWYIELVKPVMYGEDEKAKGIAYNVLYKVLTVG 682

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
            Q   LL   +P +  +I+  L
Sbjct: 683 LQ---LLHPVMPYITEEIYQHL 701


>gi|257865153|ref|ZP_05644806.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257871477|ref|ZP_05651130.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799087|gb|EEV28139.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257805641|gb|EEV34463.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 881

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 23/276 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D  +    +++P +  V G DI+ F
Sbjct: 431 GLEAPADAENWQQDPDVLDTWFSSALWPFSTMGWPDETNEDFQRYFPTNTLVTGYDIIAF 490

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP+EVIE+ G DA
Sbjct: 491 ----WVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEQYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAF 383
           LR+FL    A G+D  +  + +    N    N I N  SR V M + +     I   G  
Sbjct: 547 LRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNVSEMTAEDIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D  IL+  +  ++++ +  +      A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 SVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   + V V+ Q+  LL   +P +  +I+  L
Sbjct: 663 AAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKL 698



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FV+Q               +  +   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKLGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|258508256|ref|YP_003171007.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148183|emb|CAR87156.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 880

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++  
Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 499 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +
Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 615

Query: 396 RVLQEI 401
             ++++
Sbjct: 616 ETIKQV 621



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 101 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 158

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 159 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 206


>gi|73671043|ref|YP_307058.1| isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121725567|sp|Q465G4|SYI_METBF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7648799|gb|AAF65673.1|AF208389_1 isoleucyl-tRNA synthetase [Methanosarcina barkeri]
 gi|72398205|gb|AAZ72478.1| Isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 1058

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 21/239 (8%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNV 310
           ++WPAD    G D  R  F++    + +     P  K V  HGF L  G +K+SKSLGNV
Sbjct: 546 EWWPADFITEGHDQTRGWFYSQLGASMVGFGRAPY-KSVLMHGFTLDAGGKKMSKSLGNV 604

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MI 369
           + PI+VI++ G D LR +++   A   D  ++++ ++  V+  + N + N+    +  M 
Sbjct: 605 VSPIDVIDKYGADTLRAYVLSSSAPWDDLKFNQEEVEN-VHRSI-NILWNVFRFPLPYMA 662

Query: 370 LKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-V 424
           L ++D     +     A  E D  ILS    V++ + E M    +H+A+ +++    E +
Sbjct: 663 LDNFDPLKVSLDSVKDALREEDRWILSRIQSVVKAVDEAMSGYFLHKAVREILEFTLEDL 722

Query: 425 DRYFDA---QKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            R++      + W  +  +PD+  A  VLY   EV   L  L+  F+P LA +++  L 
Sbjct: 723 SRWYIQLIRPRTW-TEADDPDKLAAYRVLY---EVYVTLTKLISPFMPYLAEEMYQNLI 777


>gi|199597497|ref|ZP_03210926.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199591520|gb|EDY99597.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 880

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++  
Sbjct: 444 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 498

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 499 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 558

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +
Sbjct: 559 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 615

Query: 396 RVLQEI 401
             ++++
Sbjct: 616 ETIKQV 621



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 100

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 101 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 158

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 159 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 206


>gi|90101527|sp|P36420|SYV_LACCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++  
Sbjct: 447 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 501

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 502 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 561

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +
Sbjct: 562 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 618

Query: 396 RVLQEI 401
             ++++
Sbjct: 619 ETIKQV 624



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R++G D L+  G D  G     K+    +
Sbjct: 44  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAKVEAKLR 103

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 104 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 161

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 162 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 209


>gi|85858024|ref|YP_460226.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|123515751|sp|Q2LQK5|SYL_SYNAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85721115|gb|ABC76058.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 862

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+ + HIGH     I DV+AR+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKYYLLEMFPYPSGKIHIGHVRNYTIGDVVARYKRMEGYNVLHPMGWDSFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   ++ ++N  + R     +  SY  D  + T E  ++   ++ +  + +KG  YK
Sbjct: 92  ERGIHPSLWTNENITHMRKQLKRMGFSYDWDREVSTCEPVYYRWEQLFFLWMYEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +  R +    +++V  G     +      V+ + ++ +FFR++AY D+LL+  +
Sbjct: 152 KTSSVNWCPRCQTVLANEQVEAGL---CWRCGSEVVEKILDQ-WFFRITAYIDELLAGCD 207

Query: 182 ---SHPEFILPIER 192
                PE +L ++R
Sbjct: 208 RLTGWPERVLTMQR 221



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 25/188 (13%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           I+ K EK+SKSL NV+DP  ++ + G D  R F +      KD  +   G++        
Sbjct: 608 IVGKTEKMSKSLKNVVDPDYLVRQYGADTARMFCLFAAPPEKDLEWSDQGVE-------- 659

Query: 356 NGIGNLVSRSVSMI---LKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQL- 409
            G    + R+  ++   L D  G+ P  G      E  S+     + ++++R++M  +  
Sbjct: 660 -GSFRFIGRTWRIVVDYLDDLQGIAPFAGDGELEGELKSLRRKTHQTIRKVRDDMGERFH 718

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A++ ++ LV+ +   +   +P       P    T L V  E I  + +LL   VP L
Sbjct: 719 FNTAISAIMELVNTL---YGLPRP-------PREDRTALAVIRETIEAIILLLAPIVPHL 768

Query: 470 ANKIFDIL 477
             +++ +L
Sbjct: 769 TEELWQML 776


>gi|42518883|ref|NP_964813.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81667980|sp|Q74JZ8|SYV_LACJO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41583169|gb|AAS08779.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 879

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K+L   ++  +     ER    +    S + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDENSEDFKRYFPTNT 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K     V  HG I   +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V++E G DALR+FL+   A G+D  YD   +    N    N I N  SR V M L +  
Sbjct: 534 DVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    +  + E+
Sbjct: 591 KPAHMPDTSKFDLADSWIFDRLNHTVSEV 619



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      R
Sbjct: 99  TQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204


>gi|409360|gb|AAA57558.1| valyl-tRNA synthetase [Lactobacillus casei]
          Length = 901

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++  
Sbjct: 465 DPD-VLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPF----WVARMIFQ 519

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +        HG +   +G K+SKSLGN IDP++VIE+ G DALR+FL+     G
Sbjct: 520 GLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPG 579

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +
Sbjct: 580 QDTRFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLN 636

Query: 396 RVLQEI 401
             ++++
Sbjct: 637 ETIKQV 642



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R++G D L+  G D  G     K+    +
Sbjct: 62  SIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAKVEAKLR 121

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      F       +  M   LD S + F  T +K  +   R
Sbjct: 122 KEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERF--TLDKGLNQAVR 179

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 180 RVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKY 227


>gi|240102645|ref|YP_002958954.1| isoleucyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910199|gb|ACS33090.1| Isoleucyl-tRNA synthetase (ileS) [Thermococcus gammatolerans EJ3]
          Length = 1066

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 159/334 (47%), Gaps = 25/334 (7%)

Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           W  E+G  + + ++++  +L    E   E I   E  NE +  ++  L    L R   D 
Sbjct: 474 WQAEDGEIYVVGSFKELVELAVAIEVDGERIELPEDYNEKLRVIEEKLGPEDLHRPYVDA 533

Query: 217 GIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKD-IL 268
            I   +  +      ++ VW D+    + +   LD P   +   K WPAD  V G+D + 
Sbjct: 534 FIIKVNGKEMKRVKDVVDVWFDS---GIASWASLDYPRNKELFEKLWPADFIVEGEDQVT 590

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           ++      A +++ +    + V  HG++L  KG+K+SKSLGN+I P EV+++ G D  R+
Sbjct: 591 KWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRF 650

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFT 384
           +++      ++  +   GL +     + N + N+   S + M L ++D   + P    F 
Sbjct: 651 YMLWATNPWENLRFSWKGLAQ--VKRMLNILWNVYVLSATYMSLDNFDPTKLKPEEFPFR 708

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTN 440
           E D  ILS  + +++++ E ++   + +A   + + V E + R++     ++ W ++  +
Sbjct: 709 EEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYTFVVEDLSRWYIRLIRKRMW-VEGDD 767

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           PD+ +   Y   +V   L  L+  F P +A +I+
Sbjct: 768 PDKLAA-YYTVWKVFDVLLRLMAPFTPYIAEEIY 800



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---------WKKISD 115
            G+ TK  ++             +I  D+FI+  ++   +  +I+         W    +
Sbjct: 101 LGLKTKKDIET------------EIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDN 148

Query: 116 KGDIYKGCY--SGWYSLR 131
                K  Y  SGW++L+
Sbjct: 149 PYMTIKNEYIESGWFTLK 166


>gi|323466819|gb|ADX70506.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 879

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDFKRYFPTNA 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L    K   +  +LH      +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPSDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  SD  I    +  + E+
Sbjct: 591 KPAHMPDVSKFDLSDRWIFDRLNHTVSEV 619



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAG 86


>gi|41615024|ref|NP_963522.1| hypothetical protein NEQ230 [Nanoarchaeum equitans Kin4-M]
 gi|40068748|gb|AAR39083.1| NEQ230 [Nanoarchaeum equitans Kin4-M]
          Length = 1016

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 17/264 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW+D+   +  T    DN +  K  F+P D  + G D +R  F+++     L +   
Sbjct: 588 VLDVWLDSGGAFYAT---FDNEEAYKI-FYPFDFILEGWDQIRGWFYSLLGEGVLYTNQS 643

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V+  GF+L  +G K+SKSLGN I   E++E+ G DA+R F ++     +D     
Sbjct: 644 PY-KNVYVSGFVLDEQGRKMSKSLGNFIYARELMEKYGADAVRLFTIQATGPYQDLILRI 702

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           DG+K++ +    N + N+V        K+Y  + P P      D+ ++   ++ ++E   
Sbjct: 703 DGIKEKQSN--LNILYNIVKYYFDQ--KEYLKVNPEPKKLNIVDQYVIYKINKAIEETIN 758

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV----EVIRQLA 459
             +N  I +A   +     E+ R++       ++K+  D A+T+LYV      ++IR +A
Sbjct: 759 YFENYQIWKAPKPLEEFWLELSRFYIKVNRERIEKSKDD-AATILYVLKYSLDKLIRAIA 817

Query: 460 ILLQAFVPKLANKIFDILFVADEN 483
            ++      L  K+ D L   +E+
Sbjct: 818 PIIPFSAEYLYQKMRDELGYKEES 841


>gi|254518604|ref|ZP_05130660.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912353|gb|EEH97554.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 880

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 21/238 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308
           F+P ++ V G DI+ F    W A ++ + +    K     V  HG I   +G K+SKSLG
Sbjct: 478 FYPTNVLVTGYDIIFF----WVARMIFSGIHNMDKTPFDTVLIHGIIRDSQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366
           N +DP+EVI+E G DALR+ LV   + G D  Y    + +RV A  + AN + N  SR V
Sbjct: 534 NGVDPLEVIDEYGADALRFMLVTGNSPGNDIRY----IPERVEAARNFANKMWN-ASRFV 588

Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L K+          ++ +D+ ILS  + +++E+ ENM+   +  AL +V   +    
Sbjct: 589 MMNLDKEVMDKYADCKEYSLADKWILSRMNTLVKEVTENMEKYELGIALQKVYDFMWTEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            D Y +  K   L   +  +   V  V  +V++    LL   +P +  +I+  L   D
Sbjct: 649 CDWYIELVKG-VLYGDDEKQKGIVYNVLNDVLKTGLKLLHPVMPFITEEIYTTLTDGD 705


>gi|221633490|ref|YP_002522715.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221157072|gb|ACM06199.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 892

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 31/283 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP  ++  W  +     +T G+ D+ D  +  F+P  +   G DIL     +W A 
Sbjct: 448 RIEQDPD-VLDTWFSSGLWPFSTLGWPDDTDDLR-YFYPGSVMETGYDIL----FFWVAR 501

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L    +V  +   LH      +G+++SK+ GNVIDP EV ++ G DALR+ LV  
Sbjct: 502 MVFLGLEFMGEVPFYTVYLHGTVRDERGQRMSKTKGNVIDPTEVTQQYGADALRFTLVTM 561

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTP--GAFTE 385
              G D     + ++   N   AN I N    ++ +     I +  DG + +P   A + 
Sbjct: 562 AGPGTDMKLSLNRVEASRN--FANKIWNATRYTLRVLAGGEIEQAPDGSVVSPERSAMSL 619

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD- 442
           +D  ILS   RV  E+ + ++    H A   +   +     D Y +A K   +   +P  
Sbjct: 620 ADRWILSRLERVTTEVTDQLERYQFHEAGHLLYDFLWSQFCDWYIEASKV-AINAGDPGA 678

Query: 443 RAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           RA+  T+ YV    +R    LL  F+P +  +++  L  A E+
Sbjct: 679 RAARQTLAYVLERALR----LLHPFMPFVTEELWQRLPHAGES 717


>gi|28211899|ref|NP_782843.1| valyl-tRNA synthetase [Clostridium tetani E88]
 gi|75541792|sp|Q891R5|SYV_CLOTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28204342|gb|AAO36780.1| valyl-tRNA synthetase [Clostridium tetani E88]
          Length = 880

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 22/259 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  +  +  F+P D+   G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTEDLEY-FYPTDVLATGYDIIFF----WVARMIFSGLHN 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-G 339
              +P K V  HG +   +G+K+SKSLGN +DP+EVI++ G DALR+ L+   A G D  
Sbjct: 506 MKEIPFKTVLIHGIVRDSEGKKMSKSLGNGVDPLEVIDKYGADALRFMLITGNAPGNDIR 565

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVL 398
           FY++     R   + AN I N  SR V M L K+          +  +D  ILS  + V+
Sbjct: 566 FYEERVESAR---NFANKIWN-ASRYVMMNLDKNLMEKYKDCKDYNIADTWILSRLNEVI 621

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY-VTVEVI 455
           +E+ +N++   +  A  +V   +     D Y +  KP  +     ++A  V + V   V+
Sbjct: 622 KEVTDNIEKFELGMASQKVYDFMWNEFCDWYIELSKP--VLYGEDEKAKGVTFNVLFNVL 679

Query: 456 RQLAILLQAFVPKLANKIF 474
                LL   +P +  +IF
Sbjct: 680 TSGLKLLHPIMPFITEEIF 698


>gi|300856628|ref|YP_003781612.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436743|gb|ADK16510.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 882

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 24/269 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  +  K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTEDLKC-FYPNNTLVTGYDIIFF----WVARMIFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + V  HG +   +G K+SKSLGN +DPIEVI+E G DALR+ L+   A G D  
Sbjct: 506 MDDIPFENVLIHGIVRDSQGRKMSKSLGNGVDPIEVIDEYGADALRFTLITGNAPGNDIR 565

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRV 397
           Y      +RV A  + AN I N  SR V M I +D          ++ +D  I+S  + +
Sbjct: 566 Y----YPERVEASRNFANKIWN-ASRFVLMNIDEDLMSKYKDCKDYSGADRWIMSKLNTL 620

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++E+ +N++   +  A  ++   +     D Y +  KP  +     ++A  V Y  +  +
Sbjct: 621 VKEVTDNIEKFELGIASQKLYDFIWGELCDWYIELVKP--VMYGEDEKAKGVAYNVLNNV 678

Query: 456 RQLAI-LLQAFVPKLANKIFDILFVADEN 483
              ++ LL   +P +  +I+  L+   E+
Sbjct: 679 LSTSLQLLHPVMPFITEEIYTHLYTEYES 707


>gi|182416784|ref|ZP_02948179.1| valyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667221|ref|ZP_04527205.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379364|gb|EDT76861.1| valyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655569|gb|EEP53125.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 880

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 19/230 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P  + V G DI+ F    W A ++ + L    +   H  ++H      +G K+SKSLG
Sbjct: 478 FYPNSVLVTGHDIIFF----WVARMIFSGLHCMGETPFHTVLIHGLIRDSQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP+EVI++ G DALR+ +    A G D  Y  + ++   N   AN I N  SR V M
Sbjct: 534 NGVDPLEVIDQYGADALRFMIATGNAPGNDMRYYPERVESSRN--FANKIWN-ASRFVMM 590

Query: 369 IL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            L K+          ++ +D+ ILS  + +++E+ ENM+   +  A+++V   +     D
Sbjct: 591 NLDKEIMNKYKDCKEYSLADKWILSEMNTLVKEVTENMEKYELGIAMSKVYDFMWTEFCD 650

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474
            Y +  KP  +     ++A  V Y  +  +    + LL   +P +  +I+
Sbjct: 651 WYIELIKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIY 698


>gi|85859788|ref|YP_461990.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722879|gb|ABC77822.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 887

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 155/386 (40%), Gaps = 49/386 (12%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L+++ Y    E Y    G+ Y  + +   ++ ++ +F R+       +S        I+P
Sbjct: 328 LKEQGYLVSVEPYMHNVGKCYRCKTDIEPYVSKQ-WFVRIKPLAKAAISAVVKGKTRIIP 386

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP----------- 224
                    ++ + ++D  +SR+ + WG +IP               DP           
Sbjct: 387 PMWEATYYEWMNN-IRDWCISRQIW-WGHRIPVWTCESCGRMIVSTQDPDACPDCGSNEL 444

Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +     +T G+ D     K  F+P  L + G DIL F    W A ++ 
Sbjct: 445 RQEEDVLDTWFSSALWPFSTLGWPDRTPALKT-FYPTSLLITGFDILFF----WVARMMM 499

Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               + K V      LH      KGEK+SKS GN IDP+++I++ G DA R+ L    A 
Sbjct: 500 MGKYIMKDVPFRDVYLHALVRDEKGEKMSKSKGNSIDPLDMIDKYGTDAFRFTLAAFSAQ 559

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSV 393
           G+D    ++ ++        N I N  +R   M L+DY       G   +S  D  ILS 
Sbjct: 560 GRDVRMSEERIEG--YKFFVNKIWN-AARFSLMNLEDYPAEGAAAGREEKSLKDRWILSR 616

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             R   E+  ++     + A A V S       D Y +  KP    K  P+         
Sbjct: 617 LQRTTAEVVRSLDEYRFNDAAAAVYSFFWHEFCDWYLELIKPTLYGKETPEERMAAQLTL 676

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
            EV++    LL  F+P +  +I+  L
Sbjct: 677 KEVLKNGLKLLHPFMPFITEEIWQKL 702


>gi|292655697|ref|YP_003535594.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371634|gb|ADE03861.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 1043

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 26/272 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP 276
           ++PD    +  VWID+    + T G LD P  + A  + WPADL +   D  R    +W 
Sbjct: 522 RVPD----VFDVWIDS---SVATWGTLDFPGETDAYDELWPADLIIEAHDQTR--GWFWS 572

Query: 277 AFLL--SANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              +  +A    P K+V  HGF   K G K+SKS+GN++ P E I+  G D LR +L+  
Sbjct: 573 QLGMGTAATGESPYKEVIMHGFANDKDGRKMSKSVGNIVTPEEAIDRAGRDPLRAYLLSH 632

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESD 387
              G D  ++ DGL    +    N   N+    +  +  D DG  P     + G  T  D
Sbjct: 633 DQQGVDLSFEWDGLADTQST--LNIFWNVFRFPLPYM--DLDGYDPAEADLSAGELTVVD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           E +LS    V  E+ +   +  +  AL  ++  +++    F  +   E      D AS +
Sbjct: 689 EWVLSRLQTVEAEMADAWDDYEVSTALNTLLDFITKDVSRFYVKAIRERMWDEEDSASKL 748

Query: 448 -LYVTVEVIRQLAI-LLQAFVPKLANKIFDIL 477
             Y T+  +   +I L+  + P +A +++  L
Sbjct: 749 GAYATLSTVLSESIRLIAPYAPYMAERMYQRL 780


>gi|150016655|ref|YP_001308909.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903120|gb|ABR33953.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 881

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 19/230 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308
           F+P    V G DI+ F    W A ++ + L    +     V  HG I   +G K+SKSLG
Sbjct: 479 FYPTSTLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 534

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP+EVIE  G DALR+ +    A G D  Y  + ++   N   AN I N  SR V M
Sbjct: 535 NGVDPLEVIETYGADALRFMIATGNAPGNDMRYYPERVESSRN--FANKIWN-ASRFVMM 591

Query: 369 IL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            L K+          ++ +D+ ILS  + +++E+ ENM+   +  A+ +V   +     D
Sbjct: 592 NLDKEVMNKYKDCKEYSLADKWILSEMNTLIKEVTENMEKYELGIAMQKVYDFMWTEFCD 651

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474
            Y +  KP  +     ++A  ++Y  +  +    + LL   +P +  +IF
Sbjct: 652 WYIELVKP--VFYGEDEKAKGIVYNVLNTVLITGLKLLHPAMPFITEEIF 699


>gi|149911110|ref|ZP_01899737.1| leucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805860|gb|EDM65849.1| leucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 864

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRMQGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYENIDYMKGQLTSLGFGYDWKREIATCTPEYYRWEQEFFTKLFNKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-- 179
              S  +   DE    +++V    DG  +     PV+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSSVNWCPNDETVLANEQV---NDGCCWRCD-TPVEQKEIPQWFIKITEYADELLTSID 207

Query: 180 -YESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
             +  PE +  ++R    R+E I   F   G  D +LS+ +       PD    + YV I
Sbjct: 208 DLDGWPEQVKTMQRNWIGRSEGIELDFTVEGESDAALSKLSV--YTTRPDTVMGVTYVGI 265

Query: 233 DALTNYLTTTGYLDNP 248
            A  + L T   L NP
Sbjct: 266 -AAGHPLATKAALTNP 280


>gi|196039248|ref|ZP_03106554.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029875|gb|EDX68476.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 881

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|163791284|ref|ZP_02185698.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873425|gb|EDP67515.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 877

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQYIMY------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +  M        W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 427 GMEAPEDSENWMQDPDVLDTWFSSALWPFSTMGWPDEESEDFKRYFPTNTLVTGYDIIFF 486

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP++VIE+ G DA
Sbjct: 487 ----WVSRMMFQSLEFTGKRPFNNVLIHGLIRDTEGRKMSKSLGNGIDPMDVIEKYGADA 542

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAF 383
           LR+FL    A G+D  +  D +    N    N I N  SR   M ++D+    I   G  
Sbjct: 543 LRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-ASRFALMNMEDFTVDQIDLTGEK 599

Query: 384 TESDESILSVCSRVLQEI 401
           T +D  IL+  +  ++++
Sbjct: 600 TVADRWILTKLNETVEKV 617



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 18/110 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 38  SVVIPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQGYDTLWLPGMDHAG-----IATQAKV 92

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114
             K+  D  SR         D+  + FI T    ++ +    R  W K+ 
Sbjct: 93  EAKLAEDGISR--------YDLGREKFIDTVWDWKEEYASVIREQWAKVG 134


>gi|257874768|ref|ZP_05654421.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257808934|gb|EEV37754.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 881

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 23/276 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D  +    +++P +  V G DI+ F
Sbjct: 431 GLEAPADAENWQQDPDVLDTWFSSALWPFSTMGWPDETNEDFQRYFPTNTLVTGYDIIFF 490

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP+EVIE+ G DA
Sbjct: 491 ----WVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEQYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAF 383
           LR+FL    A G+D  +  + +    N    N I N  SR V M + +     I   G  
Sbjct: 547 LRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNVSEMTAEDIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D  IL+  +  ++++ +  +      A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 SVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   + V V+ Q+  LL   +P +  +I+  L
Sbjct: 663 AAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKL 698



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FV+Q               +  +   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKIGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|119775714|ref|YP_928454.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119768214|gb|ABM00785.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 864

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 18/255 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 37  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDAFGLPAENAAI 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 97  KNATAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 157 KTSAVNWCPNDQTVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 212

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             E  PE +  ++R    R+E +      +KD   S  +FD     PD    + YV I A
Sbjct: 213 NLEGWPEQVKTMQRNWIGRSEGVEMTFK-VKD---SDDSFDIYTTRPDTVMGVTYVAI-A 267

Query: 235 LTNYLTTTGYLDNPD 249
             + L     L+NP+
Sbjct: 268 AGHPLAEKAALNNPE 282


>gi|126697211|ref|YP_001092097.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126544254|gb|ABO18496.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 918

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 30/294 (10%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           + K F   IK+  D   ++  W  +     +T G+ +  D    K++P  + V G DI+ 
Sbjct: 455 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIF 513

Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           F    W A +       + N+P  K V+ HG +     +K+SKS GN IDPI +I++ G 
Sbjct: 514 F----WVARMTMMGNTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 568

Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DALR+ L+RE+A  G+D   D D  K   +  + +    N +  +   +L   +      
Sbjct: 569 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 626

Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429
            +F ESDE+ L +C +     L ++   +   L    L +   L+ E       D Y + 
Sbjct: 627 YSFNESDENSLELCDKWILSKLNQVNIKVTALLKEYKLGESAKLLYEFTWNDFCDWYVEF 686

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A++ +  K+T   + S    V ++V+  + +++  F+P +  +++ +L +  +N
Sbjct: 687 AKQRFNNKETKNRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDN 738



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+   + DV+ RF RL G +VL   GTD
Sbjct: 57 HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTD 88


>gi|167770372|ref|ZP_02442425.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
 gi|167667694|gb|EDS11824.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
          Length = 879

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 163/387 (42%), Gaps = 56/387 (14%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L D  +    E YK   G  Y    + ++    + +F ++       +    S     +P
Sbjct: 334 LEDGGFLKAVEPYKHNVGSCYRC-GSVIEPRVSKQWFVKMEPLAKPAVEAVRSGRTRFIP 392

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYI-------- 227
            ER +++       +KD  +SR+ + WG +IP              + PQ          
Sbjct: 393 -ERFDKIYFNWMENIKDWCISRQLW-WGHRIPAWYCTGCGEMIVSRETPQTCPKCGSHRL 450

Query: 228 ------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                 +  W  +     +T G+ D+    +  F+P D  V G DI+ F    W A ++ 
Sbjct: 451 EQDPDTLDTWFSSALWPFSTLGWPDDTPELRY-FYPTDTLVTGYDIIFF----WVARMIF 505

Query: 282 ANL------PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           + L      P  K V  HG +   +G K+SKSLGN IDP+E+I+  G DALR+ L    +
Sbjct: 506 SGLAHMDEAPF-KTVLIHGLVRDAQGRKMSKSLGNGIDPLEIIDRYGADALRFTLATGNS 564

Query: 335 CGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            G D  +  +    +VNA  + AN I N  SR + M L D D     P      D+ +LS
Sbjct: 565 PGNDMRFSDE----KVNASRNFANKIWN-ASRFILMNLSD-DVEPGLPETLNIEDKWVLS 618

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450
               +++E+ +N++   +  A+ ++   + ++  D Y +  K     +   + +     V
Sbjct: 619 KYRTLVREVTDNLEKFELGLAVQKLYDFIWDILCDWYIELCK--SRLQAGGETSEAAQRV 676

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            V V+     LL  F+P +  +I+  L
Sbjct: 677 LVYVMTGTLKLLHPFMPFITEEIWQAL 703



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD        KI +A +
Sbjct: 47  TIVIPPPNITGRLHMGHALDETLQDILIRWRRMQGYEALWLPGTDHASIATEAKIVEAMR 106

Query: 64  NAGVTTK 70
             GVT +
Sbjct: 107 QEGVTKE 113


>gi|218778354|ref|YP_002429672.1| valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218759738|gb|ACL02204.1| Valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 888

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 48/347 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F +     +K +   E+    I+P         ++ + ++D  +SR+ + WG +IP   
Sbjct: 361 WFVKAGPLAEKAIKAVETKKTRIVPEVWEKTYFEWLYN-IRDWCISRQIW-WGHRIPAWT 418

Query: 222 -----------DDPQY-------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                      +DP               ++  W  +     +T G+ D     KA ++P
Sbjct: 419 CQDCGEIMVRMEDPDKCTCGSTNLEQESDVLDTWFSSALWPFSTMGWPDQTQLLKA-YYP 477

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLGNVI 311
             + + G DIL F    W A ++   L     +P K V+ H  +   +G+K+SKS GNVI
Sbjct: 478 TSVLITGFDILFF----WVARMMMMGLQFMDDVPFKDVYIHALVRDEEGKKMSKSKGNVI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMI 369
           DP+EVIE  G DA R+ L    A G+D         KR+       N + N    +++ +
Sbjct: 534 DPLEVIESQGTDAFRFTLASFAAMGRDIKLS----VKRIEGYRHFINKLWNAARFTLTNV 589

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
             + D       +    D  ILS  ++V+ ++ E+++    + A   +   V     D Y
Sbjct: 590 ENNPDAAAKASKSRAIPDRWILSRLNQVILQVEESLEAYQFNEAANILYKFVWHEFCDWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +A KP   ++   +  +  +     V++   +LL  F+P +  +I+
Sbjct: 650 LEAIKPILYREGAQEERNATVATLQRVLKDAIVLLHPFIPFVTEEIW 696


>gi|125625212|ref|YP_001033695.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124494020|emb|CAL99020.1| ValS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300072022|gb|ADJ61422.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 880

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 46/278 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K   H  ++H      +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  D +    N    N I N VSR + M  +D             S +++ S  ++V  +
Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441
              N+ ++ I   L   +  V+E +D++             +D    W L+ T       
Sbjct: 604 TAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663

Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A   +   V + V+ Q+  LL   +P    +IF+ L
Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+A    
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G+  +             + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158

Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           ++ ++ +KG IY+G     W      A  + + ++K  DG +Y+
Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202


>gi|189083227|sp|A1S8S8|SYL_SHEAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 18/255 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNATAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             E  PE +  ++R    R+E +      +KD   S  +FD     PD    + YV I A
Sbjct: 208 NLEGWPEQVKTMQRNWIGRSEGVEMTFK-VKD---SDDSFDIYTTRPDTVMGVTYVAI-A 262

Query: 235 LTNYLTTTGYLDNPD 249
             + L     L+NP+
Sbjct: 263 AGHPLAEKAALNNPE 277


>gi|302380657|ref|ZP_07269122.1| valine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303233692|ref|ZP_07320346.1| valine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311600|gb|EFK93616.1| valine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302495126|gb|EFL54878.1| valine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 872

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 38/352 (10%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  V+ +  + +F ++       L  Y+      +P       ++++++ ++D  +SR+ 
Sbjct: 349 HTTVEPLISKQWFVKMDKLAKLALDAYKKEEIRFIPKRFEKVYVNWLEN-IRDWCISRQL 407

Query: 214 FDWGIKIP--------------DDPQYIMYV--------WIDALTNYLTTTGYLDNPDGS 251
           + WG ++P              ++P    Y         W  +     +T G+    +  
Sbjct: 408 W-WGHRLPVYYHNETGEVVVARENPDQQKYTQDPDTLDTWFSSALWPFSTLGWPHETEDL 466

Query: 252 KAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           K  F+P ++ V G DI+ F  I   + +      +P  K V+  G +   +G K+SKSLG
Sbjct: 467 KY-FFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPF-KDVYLTGLVKDSQGRKMSKSLG 524

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVS 367
           N IDPIEVI++ G DALR+ L+     G D  FY +   K   N +  N + N  SR V 
Sbjct: 525 NGIDPIEVIDQYGADALRFALITGNTPGNDSRFYME---KVEANRNFCNKLWN-ASRFVF 580

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425
           M +++    I       E D+ I+S  + V+ E+  N+    I  A  ++      V  D
Sbjct: 581 MNVEENVKNIDEVELQIE-DKWIISSLNNVIDEVSTNLNKYEIGIAAEKIYDFTWNVFCD 639

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP  L   N     + + V +  +  +  LL  F+P +  +I+  L
Sbjct: 640 WYIELVKP-RLYGDNAKLKESAISVLIYTLTNVIKLLHPFMPYITEEIYSYL 690



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D+L R +R+DG   L+  GTD      A  A  A V  K+  +  S+  
Sbjct: 52  HLGHALNNTIQDILIRKNRMDGYSALWVPGTDH-----ASIATEAKVVNKLKEEGKSKES 106

Query: 81  RDMADVLDISYD 92
                 L+ S+D
Sbjct: 107 LGRDGFLEASWD 118


>gi|227510169|ref|ZP_03940218.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190374|gb|EEI70441.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 893

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 27/203 (13%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D+ D  K +++P D  V G DI+ F
Sbjct: 444 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMK-RYFPTDTLVTGYDIIFF 502

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DA
Sbjct: 503 ----WVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 558

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LR+FL      G+D  +  D +    N    N I N  SR V M L   DG+    +P  
Sbjct: 559 LRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL---DGIEKPKLPDK 612

Query: 381 GAFTESDESILSVCSRVLQEIRE 403
             +  SD+ ILS  +  + E+ E
Sbjct: 613 FEWQLSDKWILSRLNTTISEVSE 635



 Score = 36.6 bits (83), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  +  PN   + H+GHA++  + D++ R  R++G D L+  G D  G     K+    +
Sbjct: 50  SIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAKVEAKLR 109

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++                   F       +  +   LD   + F  T +K      R
Sbjct: 110 EQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERF--TLDKGLSKAVR 167

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 168 RVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 215


>gi|167636213|ref|ZP_02394517.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688689|ref|ZP_02879894.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254687052|ref|ZP_05150910.1| valyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741600|ref|ZP_05199287.1| valyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528434|gb|EDR91202.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667375|gb|EDT18133.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 881

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKS GN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSFGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q  +LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMLLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|227513097|ref|ZP_03943146.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083672|gb|EEI18984.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 893

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 27/203 (13%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D+ D  K +++P D  V G DI+ F
Sbjct: 444 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTDDMK-RYFPTDTLVTGYDIIFF 502

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DA
Sbjct: 503 ----WVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 558

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LR+FL      G+D  +  D +    N    N I N  SR V M L   DG+    +P  
Sbjct: 559 LRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL---DGIEKPKLPDK 612

Query: 381 GAFTESDESILSVCSRVLQEIRE 403
                SD+ ILS  +  + E+ E
Sbjct: 613 SECQLSDKWILSRLNTTISEVSE 635



 Score = 36.6 bits (83), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  +  PN   + H+GHA++  + D++ R  R++G D L+  G D  G     K+    +
Sbjct: 50  SIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAKVEAKLR 109

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++                   F       +  +   LD   + F  T +K      R
Sbjct: 110 EQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERF--TLDKGLSKAVR 167

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 168 RVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 215


>gi|222056164|ref|YP_002538526.1| valyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565453|gb|ACM21425.1| valyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 886

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 49/351 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222
           ++ ++    ++ L+  +     I+P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WYVKVGPLAERALAAVKEGKTRIVPQQWENTYYEWMEN-IRDWCISRQIW-WGHRIPAWY 419

Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                       DP                ++  W  +     +T G+ D      A F+
Sbjct: 420 CDHCGEITVAKVDPVKCSKCGSDEIRQETDVLDTWFSSALWPFSTMGWPDRTP-ELATFY 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNV 310
           P    + G DIL F    W A ++   L   ++V     + H  +   +G+K+SKS GNV
Sbjct: 479 PTSCLITGFDILFF----WVARMMMMGLHFMEEVPFVDVYIHALVRDAQGQKMSKSKGNV 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ VI+  G DA R+ L    A G+D    ++ +    N   AN I N  SR   M L
Sbjct: 535 IDPLTVIDSYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMMNL 591

Query: 371 K--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
           +  D D +       + +D  IL   +    E+ E++     + A A +     SE  D 
Sbjct: 592 EGFDPDAVKADELELSNADRWILYRLNETAGEVEESLNAYRFNDAAAALYRFTWSEFCDW 651

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K  +L K +  R +T  Y+   V+  L  LL  F+P +  +I+  L
Sbjct: 652 YIELVKD-DLYKGDSTRQTTARYILWMVLEHLLRLLHPFMPFITEEIWQAL 701



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G
Sbjct: 41 SIVIPPPNITGVLHMGHALNNTLQDILCRWKRMQGFNVLWMPGTDHAG 88


>gi|116513122|ref|YP_812029.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108776|gb|ABJ73916.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 880

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 46/278 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K   H  ++H      +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  D +    N    N I N VSR + M  +D             S +++ S  ++V  +
Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441
              N+ ++ I   L   +  V+E +D++             +D    W L+ T       
Sbjct: 604 TAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663

Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A   +   V + V+ Q+  LL   +P    +IF+ L
Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+A    
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G+  +             + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158

Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           ++ ++ +KG IY+G     W      A  + + ++K  DG +Y+
Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202


>gi|303238222|ref|ZP_07324758.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
 gi|302594268|gb|EFL63980.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
          Length = 176

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   HIGH   ++  D+LAR+ RL G +V + +G+D HG  I   A   G
Sbjct: 3   VFIGGAWPYANGSLHIGHIAALLPGDILARYFRLKGYNVCYVSGSDCHGTPIQIRANKEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           V+ +   ++   +F+   D L  SYD + +T +  H    +  +  + + G IYK
Sbjct: 63  VSPEQIANRYHNDFKGCFDKLGFSYDLYNQTNDPYHSSFVQDFFTNLLNSGYIYK 117


>gi|282883323|ref|ZP_06291917.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281296827|gb|EFA89329.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 879

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 151/358 (42%), Gaps = 67/358 (18%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +F ++       L  Y +    I+P +R  ++       ++D ++SR+ + WG ++P   
Sbjct: 361 WFVKMEPLAKPALEAYRNGELNIVP-QRFGKIYENWLLNIRDWNISRQLW-WGHRLP--- 415

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------------ 254
                VW D   NY+ +   L++P+G +                                
Sbjct: 416 -----VWYDQDGNYIVS---LEDPNGKEEYNKKTFTQDEDTLDTWFSSALWPFSTLGWPQ 467

Query: 255 -------FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISK 305
                  F+P D+ V G DI+ F  I      L     LP K V  +G +  + G K+SK
Sbjct: 468 KTEDLDYFFPTDVLVTGYDIIFFWVIRMVFSSLEQMGQLPFKDVLLNGLVRDELGRKMSK 527

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSR 364
           SLGN IDP++VI+E G DALR+ LV     G D  FY K     R  A+        +  
Sbjct: 528 SLGNGIDPLDVIDEYGADALRFTLVTGNTPGNDMRFYIKRVESSRNFANKLWNATRFIMM 587

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           ++S  + D + +I       + D+ I+S   + ++ I E +    I  A A +   +   
Sbjct: 588 NLSDDISDSNFLI---DELQDQDKWIISKLEKTIKSITEKIDKYEIGLAAADIYDFIWSD 644

Query: 424 -VDRYFDAQKP---WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  KP    E +KTN  +   +L+V   +++    LL  F+P +  +I+  L
Sbjct: 645 FCDWYIEMVKPVLYSEGQKTNTQKV--LLFVLENILK----LLHPFMPFITEEIWQTL 696


>gi|193794438|gb|ACF21431.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K + G IP        D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRF-GQIPESAELEGIDRALLDAVEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|255660428|ref|ZP_05405837.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 757

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 152/355 (42%), Gaps = 66/355 (18%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  + +F  L   +D L  Y + +P+FI P +R N+ +S   + LK   +SR+   W
Sbjct: 354 VEPMLSKQWFVDLPKLKDHL--YLKKYPDFI-P-KRFNKQVSNWLNKLKPWCISRQLI-W 408

Query: 217 GIKIPDDPQYIMYVWIDA--------------LTNYLTTTGYLDNPDGSKAKFWP----- 257
           G KIP        VW +               L NY  +   LD    S    WP     
Sbjct: 409 GHKIP--------VWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSS--LWPLICLN 458

Query: 258 ---------ADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305
                     +L V G DIL F  +   + +F  +  LP  K V  HG +   +  K+SK
Sbjct: 459 WEQDDSFHETELLVTGYDILFFWVLRMLFNSFFETKKLPF-KTVLIHGLVRDEQNRKMSK 517

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N IDP+++I   G DA+R FL      G D  + +  +K   N    N + N+    
Sbjct: 518 SLNNGIDPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWN--FLNKLWNVTKFV 575

Query: 366 VSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + +     I  D D +       + S+  IL+   +V+Q+I + +       ALA  I +
Sbjct: 576 IQLENDQEISYDLDKL-------SLSETWILAKLDKVIQKITKLLDK--FQLALANQILV 626

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474
               D + +     E  K  P++    L+ T + V+  +AILL   VP L+ +I+
Sbjct: 627 KFVWDDFCNTFI--EAIKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIY 679


>gi|259907081|ref|YP_002647437.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96]
 gi|224962703|emb|CAX54158.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96]
 gi|283476882|emb|CAY72733.1| metG [Erwinia pyrifoliae DSM 12163]
          Length = 658

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 108/510 (21%), Positives = 200/510 (39%), Gaps = 45/510 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKA 61
           ++ L IST    PN   H+GH +   + AD+  R+  L G+     TG D++   +   A
Sbjct: 114 KDTLIISTPPT-PNGDLHLGHLSGPYLGADIYRRYLTLKGVSARHLTGRDDNQTYVKCIA 172

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIY 120
            +      +V  D   + ++  A   DI+ D F    T K ++     +  ++ D+G I+
Sbjct: 173 TKEQRPPEEVANDYADKIYQTWAKA-DIALDFFSSPQTTKNYYSRVNSIIGRLYDRGFIF 231

Query: 121 KGCYSGWYSLRD-----EAYYND--DEVYKGADGQYYNAQH---------NPVQWMEEE- 163
                  Y L       E Y        +  +DG                NPV  + E  
Sbjct: 232 AKEVDELYDLNTGFSLHEGYIKGVCPHCHSASDGNACEQCGRPNDCADLINPVASLPETR 291

Query: 164 -------GYFFRLSAYQDKL--LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                    +FRLSA   +L  L++  +     +    R      +  GL D+ +S ++ 
Sbjct: 292 VGTRTTTKLYFRLSALAPQLTELTFRSN-----MSARARELTQGMLSDGLPDICISHRS- 345

Query: 215 DWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFH 271
           DWGI   IP     ++YVW +    YL     L +P     K    D +H  G D   +H
Sbjct: 346 DWGISVDIPGFEDQVLYVWFEMAAGYLAADEDL-HPQDPFFKNKNCDIIHFYGFDNTYYH 404

Query: 272 AIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            + +PA  + L     +P     +  +  +GEK S S  ++I   +++ ++ VD +R+ L
Sbjct: 405 TLLFPAIYYALDEEYNVPVNHVINELLYLRGEKFSTSRRHLIWASKLLSKIPVDYVRWGL 464

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            R      +  +  +     +N    + +   ++ S   +   + G +P PGA+T    +
Sbjct: 465 ARSRPEMTNENFSLEPFVDAINDFFVSTLQQHLTTSCRELSLQFQGKVPEPGAWTSQHAA 524

Query: 390 ILSVCSRVLQEIRENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
                  + +++             A A++  +     ++F+AQ   E +    D   T 
Sbjct: 525 FYQRIRNLARDVEHAYHIDAFSPQTATAKLEEMGILTRKFFNAQSKHETQPMLRDYQRTT 584

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +    I+Q ++L Q  + + +  I  +L
Sbjct: 585 FALNFWAIKQFSLLSQPIMLEGSEYILKLL 614


>gi|30264526|ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529989|ref|YP_021338.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187350|ref|YP_030602.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321827|ref|ZP_00394786.1| COG0525: Valyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872012|ref|ZP_02216653.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640706|ref|ZP_02398966.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708361|ref|ZP_02898805.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653987|ref|ZP_02936028.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567025|ref|ZP_03019941.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218905660|ref|YP_002453494.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817238|ref|YP_002817247.1| valyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229093554|ref|ZP_04224656.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229600610|ref|YP_002868742.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724614|ref|ZP_05186397.1| valyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736562|ref|ZP_05194268.1| valyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754802|ref|ZP_05206837.1| valyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|81581271|sp|Q81LD3|SYV_BACAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30259184|gb|AAP28389.1| valine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505137|gb|AAT33813.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181277|gb|AAT56653.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712302|gb|EDR17838.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511278|gb|EDR86664.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126736|gb|EDS95619.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172081042|gb|EDT66120.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562016|gb|EDV15985.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218536093|gb|ACK88491.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227005238|gb|ACP14981.1| valine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228689884|gb|EEL43689.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229265018|gb|ACQ46655.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 881

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|323339480|ref|ZP_08079759.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093094|gb|EFZ35687.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 887

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P D  V G DI+ F    W + ++  +L  
Sbjct: 453 VLDTWFSSALWPFSTMGWPDTESEDFKRYFPTDTLVTGYDIIFF----WVSRMIFQSLEF 508

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL      G+D  
Sbjct: 509 TGRRPFKHVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSTGSTPGQDVR 568

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +    +    N    N I N  SR V M L  D    +P    +  SD+ ILS  ++ ++
Sbjct: 569 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDDDTKAELPEKSEWQLSDKWILSRLNKTVK 625

Query: 400 EI 401
           E+
Sbjct: 626 EV 627



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+     
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 101

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++      + FVD+      + A +         L + YD    T ++      R +
Sbjct: 102 EQGISRYDLGREKFVDKVWEWKDEYASIIKQQWAKLGLSLDYDRERFTLDEGLSKAVRKV 161

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQH 154
           +  +  KG IY+G Y   +  +     +D EV    D G +Y+ ++
Sbjct: 162 FVSLYKKGLIYRGEYIINWDPKARTALSDIEVIHQDDKGAFYHVKY 207


>gi|301055965|ref|YP_003794176.1| valyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378134|gb|ADK07038.1| valyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 881

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVAFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|228929504|ref|ZP_04092524.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830184|gb|EEM75801.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 867

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGHKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|15674155|ref|NP_268330.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537370|sp|Q9CDP6|SYV_LACLA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12725235|gb|AAK06271.1|AE006446_3 valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 880

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 46/278 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFIRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K   H  ++H      +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  D +    N    N I N VSR + M  +D             S +++ S  ++V  +
Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDI------------SADAVSSALTKVANK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441
              N+ ++ I   L   +  V+E +D++             +D    W L+ T       
Sbjct: 604 TAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663

Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A   +   V + V+ Q+  LL   +P    +IF+ L
Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+A    
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G+  +             + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158

Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           ++ ++ +KG IY+G     W      A  + + ++K  DG +Y+
Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202


>gi|228917096|ref|ZP_04080654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935777|ref|ZP_04098589.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823834|gb|EEM69654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842514|gb|EEM87604.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 867

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 350 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 407

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 408 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 467

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 468 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 524 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 580

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 581 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 640

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 641 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 686



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 29  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 86

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 87  LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 146

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 147 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 194


>gi|313673271|ref|YP_004051382.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940027|gb|ADR19219.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 874

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 23/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K   KF+P    V G DIL F    W A ++    
Sbjct: 450 VLDTWFSSALWPFSTMGW---PEKNKTIEKFYPTSCLVTGFDILFF----WVARMIMMGQ 502

Query: 285 PLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              KK     V+ H  +  + G+K+SKS GNVIDP+ +I++ G D+ R+ L    A G+D
Sbjct: 503 KFMKKEPFKHVYIHALVRDQYGQKMSKSKGNVIDPLVIIDKYGADSFRFTLASLAAQGRD 562

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               +D ++   N    N I N  SR + M L  Y    P      + D+ ILS+     
Sbjct: 563 IKLSEDRIEGYRN--FVNKIWN-ASRFILMNLGGYKPKDPVLEKLNKEDKWILSMLKDTA 619

Query: 399 QEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++ + +++   + A  ++     ++  D Y +  K    K  N D A   L   V V++
Sbjct: 620 DDVAKAIESYNFNEAALKIYHFFWLNFCDWYIEFIKIRIFKNENKDEA---LDTAVYVLK 676

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           +  I+L  F+P +   I+ ++
Sbjct: 677 KSLIILHPFMPFVTEYIYKLI 697



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     H+GHA    + D+L R+H+L G + ++  GTD  G      + K   
Sbjct: 41  SIVIPPPNVTGSLHMGHALNNTLQDILIRYHKLIGFETMWIPGTDHAGIATQNVVEKMLH 100

Query: 64  NAGVT 68
           + G+T
Sbjct: 101 SEGLT 105


>gi|118479624|ref|YP_896775.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044847|ref|ZP_03112081.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866439|ref|YP_002751817.1| valyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186699|ref|ZP_04313858.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118418849|gb|ABK87268.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024335|gb|EDX63008.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789413|gb|ACO29630.1| valine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596802|gb|EEK54463.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 881

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KFEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|254757634|ref|ZP_05209661.1| valyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 881

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|228925025|ref|ZP_04088154.1| tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228834602|gb|EEM80112.1| tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 545

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 48/367 (13%)

Query: 6   KLYISTAIA-YPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K +I TA     N   HIGH +   + ADV +RF ++ G +V+++T  D+H   IA  A+
Sbjct: 2   KTFIVTATPPTTNGDLHIGHLSGPYLAADVFSRFQKMKGNNVIYSTSGDDHQTYIATTAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKG----- 117
             G T +  V+  ++  +D      I+ + F  +   + H    + ++KK+ +KG     
Sbjct: 62  RKGWTPEKLVEYYTKKVQDTLGAAFINLNIFSNSLNNQEHIKFVQSIFKKLYNKGVFVEK 121

Query: 118 ----DIYKGCYSGWYS--LRDEAYYNDDEVYKGADGQYYNAQH---------NPVQWMEE 162
                    C    +   ++ E  + +++    A G    A           NPV  +  
Sbjct: 122 QKEIHFCNNCDQYLFESFIKGECPFCNEK----ASGNLCEACGRINDPIELINPVCGLCG 177

Query: 163 E--------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           E        G FF L  Y+D+L+ YY S   +   ++     I  V   + D  ++  T 
Sbjct: 178 ETPTISSYKGMFFPLENYRDQLVEYYNSRVSWRPHLKELCNWI--VSKPIPDYPVTYPT- 234

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTG---YLDNPDGSKAKFWPAD---LHVIGKD 266
            WGI +P        + VW +    ++ TT     L++ + S       +   +  +G D
Sbjct: 235 KWGIPVPIKGYTNQCINVWFEMYPGHIATTNKWLQLNDSNFSVENLCENNATLVQFLGYD 294

Query: 267 ILRFHAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              F+A+   A  F +     LP+ + ++ F L +  K S S  + I   ++++EV  D+
Sbjct: 295 NSFFNAVLHVATCFAIDEGYLLPEHIITNEFYLLEHAKFSTSREHAIWGSDLLKEVPADS 354

Query: 325 LRYFLVR 331
           LRY++ R
Sbjct: 355 LRYYVCR 361


>gi|325473922|gb|EGC77110.1| valyl-tRNA synthetase [Treponema denticola F0402]
          Length = 909

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 158/387 (40%), Gaps = 68/387 (17%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L +   + ++E  K A G  Y   H  ++    + +F ++     K L  ++       P
Sbjct: 344 LEELGLFKNEEKIKHAVGCCYRC-HTSIEPYVSKQWFVKMQPLAQKALDAWKKGDVVFYP 402

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------DDPQY----- 226
            +  N    ++ + ++D  +SR+ + WG +IP                  + P       
Sbjct: 403 QKWENTYAHWM-NNIRDWCISRQLW-WGHRIPVWYCTDCGKTNVSRTDITECPHCKSKNI 460

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     +T G+    +   A+F+P    V G DI+ F    W A ++ 
Sbjct: 461 KRDEDVLDTWFSSWLWPFSTLGWPKKTE-DLARFFPTSALVTGHDIIFF----WVARMIM 515

Query: 282 ANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A+L        K +F HG +  K G K+SKSLGN IDP+  IEE G DA+++ L     C
Sbjct: 516 ASLQFTGKAPFKDIFIHGLVRDKQGRKMSKSLGNGIDPLVAIEEFGADAMKFTLT--FMC 573

Query: 336 G---KDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFT 384
           G   +D   D +  K  + +  AN +        GNL  R++  +++D      +  +  
Sbjct: 574 GSQSQDFLIDMESFK--LGSKFANKVWNASRYILGNLAGRTIVPVVRD-----GSQNSLK 626

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK---KT 439
           E D  I    +   Q +R ++ +   + A  +V         D Y +  K    K   + 
Sbjct: 627 ELDRWIYHELNEAAQTVRSSLDSYRYNEAAQKVYEFFWNNFCDWYVEGTK-LSFKYGDEK 685

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFV 466
             DRA++VL   +E   +L     AFV
Sbjct: 686 EKDRAASVLLAVLEESLRLLHPFLAFV 712



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 17/89 (19%)

Query: 2   KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K+  K   +  I  PN     H+GHA +  + DV+ R+HR+ G + L+  GTD       
Sbjct: 38  KKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTD------- 90

Query: 60  KAAQNAGVTTKVFVDQN----SRNFRDMA 84
               +AG+ T+  V++      +N RD+ 
Sbjct: 91  ----HAGIATQSVVEKKLKAEGKNRRDLG 115


>gi|312870463|ref|ZP_07730583.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094020|gb|EFQ52344.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 883

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 14/197 (7%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 434 GMEAPKDAENWEQDNDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 493

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VI++ GVDALR+
Sbjct: 494 WVSRMIFQSLEFTGKAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 552

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+     G+D  +    +K     +  N I N  SR V M L +    ++P    +  +
Sbjct: 553 FLITGSTPGQDIRFSY--IKMDAAWNFINKIWN-ASRYVIMNLGEMPAPVLPAKEKWDLA 609

Query: 387 DESILSVCSRVLQEIRE 403
           D  ILS  +  ++++ E
Sbjct: 610 DRWILSRLNATIEQVTE 626



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWIPGMDHAGIATQAKVEARLR 99

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++      + FV Q      + AD+         + + YD    T ++  +   R +
Sbjct: 100 KQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 159

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  KG IY+G Y   W      A  + + V+K   G +Y+ ++
Sbjct: 160 FVDLYKKGLIYRGTYIINWDPQARTALSDIEVVHKDDQGAFYHVKY 205


>gi|320162142|ref|YP_004175367.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995996|dbj|BAJ64767.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 902

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 21/276 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           ++I  DP  ++  W  +     +T G+ +N PD     F+P  +   G DIL F    W 
Sbjct: 450 LRIEQDPD-VLDTWFSSGLWPFSTLGWPENTPD--LRYFYPTSVLETGYDILFF----WV 502

Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L    +V  H   LH       G+K+SKS GNV+DP+ V+ E+G DALR+ L+
Sbjct: 503 ARMIMMGLEFTGEVPFHTVYLHGLIRDEHGQKMSKSKGNVVDPLIVMNEMGTDALRFTLL 562

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G D   +    K   N + AN + N + R V   L         P  +T +D  I
Sbjct: 563 VGSTPGND--VNLSLKKVEANRNFANKLWN-IGRFVLSALDQAPTQAEKPAEWTLADSWI 619

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
            +    +++E+    Q+     A  Q+         D Y +  K  +      DRA    
Sbjct: 620 WARLQNLIREVERLFQSYQYGEAGRQIYEFTWGEFADWYLEIAK--QQLAQGGDRAYWTA 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y    V+     LL  F P +  +++  L  A E +
Sbjct: 678 YTLTRVLDACLRLLHPFTPFVTEELWGYLKRACEEK 713



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 24/133 (18%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65
           +I  PN   + H+GHA  + + D++ R+HR+ G+  L+  GTD  G     ++ K   + 
Sbjct: 50  SIPPPNVTGELHLGHAMFVSMEDLMIRYHRMKGVPTLWVPGTDHAGIATQLQVEKMLASE 109

Query: 66  GVTTKVFVDQN----------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           G+T  +   +                 +R  R +    D   + F  T ++      R  
Sbjct: 110 GLTRDMLGREGFLKRAWEWKNKYGGIITRQIRRLGASCDWDRERF--TLDEGLSRAVREA 167

Query: 110 WKKISDKGDIYKG 122
           + ++ +KG IY+G
Sbjct: 168 FVRLYEKGLIYRG 180


>gi|161484946|ref|NP_713943.2| valyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|90101529|sp|Q8EZT8|SYV_LEPIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|293386243|gb|AAN50961.2| valyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 882

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 31/276 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ D  +  K +++P  + V G DI+ F    W + 
Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTLGWPDQTEDLK-RYYPTSVLVTGFDIIFF----WVSR 495

Query: 279 LLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   +     P   KV  HG +  K G+K SKS+GNVIDP+ ++++ G D+ R+FL   
Sbjct: 496 MIMMGMKFMQAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMDKYGTDSFRFFLAAT 555

Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGA---F 383
           +  GKD  +D+   DG +        N I N  SR + M L+  +  +P   TP      
Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLE--ESFVPIGITPDIEKDL 607

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441
              D+ ILS  +  L+E  +       +   A +   +     D Y +  KP    K +P
Sbjct: 608 EPMDQWILSRFNHCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVSP 667

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A     V  +V+ +   LL  F+P L  ++  + 
Sbjct: 668 RSAEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703


>gi|45656371|ref|YP_000457.1| valyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81407853|sp|Q72V30|SYV_LEPIC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|45599605|gb|AAS69094.1| valyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 882

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 31/276 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ D  +  K +++P  + V G DI+ F    W + 
Sbjct: 442 EVEPDPD-VLDTWFSSQLWPFSTLGWPDQTEDLK-RYYPTSVLVTGFDIIFF----WVSR 495

Query: 279 LLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   +     P   KV  HG +  K G+K SKS+GNVIDP+ ++++ G D+ R+FL   
Sbjct: 496 MIMMGMKFMQAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMDKYGTDSFRFFLAAT 555

Query: 333 IACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGA---F 383
           +  GKD  +D+   DG +        N I N  SR + M L+  +  +P   TP      
Sbjct: 556 LPEGKDILFDESRLDGYR-----SFCNKIWN-SSRFILMNLE--ESFVPIGITPDIEKDL 607

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441
              D+ ILS  +  L+E  +       +   A +   +     D Y +  KP    K +P
Sbjct: 608 EPMDQWILSRFNHCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVSP 667

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A     V  +V+ +   LL  F+P L  ++  + 
Sbjct: 668 RSAEVAKQVLSDVLIRALGLLHPFMPFLTEEVHSVF 703


>gi|239637538|ref|ZP_04678510.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596756|gb|EEQ79281.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 876

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDVDAEDFKRYFPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    A G+D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSAPGQDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398
           Y  + ++   N    N I N    S+  I +D++   I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFNVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              ++ +  +   + RAL   I      D Y +  K   +   + D+  T   V   V+ 
Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEDQKQTTRSVLSYVLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +  KI+  L
Sbjct: 675 RIMRMLHPFMPFVTEKIWQSL 695



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G
Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG 85


>gi|21229069|ref|NP_634991.1| isoleucyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74522709|sp|Q8PSV9|SYI_METMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20907621|gb|AAM32663.1| Isoleucyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 1058

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 22/263 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+      T  +    D    ++WPAD    G D  R  F++    + +     P  
Sbjct: 523 VWFDSAVASWATLKFPQTRDQFD-EWWPADFITEGHDQTRGWFYSQLGASMVGFGRAPY- 580

Query: 288 KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HGF L  G +K+SKSLGNVI P+++I   G D LR +++   A   D  ++ + +
Sbjct: 581 KSVLMHGFTLDAGGKKMSKSLGNVISPLDIIGRFGADTLRAYVLSSSAPWDDLKFNLEEV 640

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMI----PTPGAFTESDESILSVCSRVLQEI 401
           +    +   N + N+    +  M L ++D M         A  E D  ILS    V++ +
Sbjct: 641 ETIHRS--INILWNVFRFPLPYMALDNFDPMQVSLDSVRDALREEDRWILSRAQSVVKSV 698

Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDR--ASTVLYVTVEVI 455
            E M   L+H+A+ +++    E + R++      + W  +  +PD+  A  VLY   EV 
Sbjct: 699 DEAMSGYLLHKAVREILDFTLEDLSRWYIQLIRPRTW-TEADDPDKLAAYCVLY---EVY 754

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             +  L+  F+P LA +++  L 
Sbjct: 755 VTITKLISPFMPYLAEEMYQNLI 777


>gi|259502839|ref|ZP_05745741.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169206|gb|EEW53701.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 883

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 434 GMEAPQDAENWEQDSDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 493

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VI++ GVDALR+
Sbjct: 494 WVSRMIFQSLEFTGKAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 552

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+     G+D  +    +    N    N I N  SR V M L +     +P    +  +
Sbjct: 553 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPQLPAKDKWDLA 609

Query: 387 DESILSVCSRVLQEIRE 403
           D  ILS  +  ++++ E
Sbjct: 610 DRWILSRLNATIEQVTE 626



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 99

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++      + FV Q      + AD+         + + YD    T ++  +   R +
Sbjct: 100 KQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKLGISVDYDRERFTLDEGLNKAVRKV 159

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  KG IY+G Y   W      A  + + V+K   G +Y+ ++
Sbjct: 160 FVDLYKKGLIYRGTYIINWDPQARTALSDIEVVHKDDQGAFYHVKY 205


>gi|294629342|ref|ZP_06707902.1| valyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292832675|gb|EFF91024.1| valyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 874

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPERTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     DG +P P A + +D  ILS  + V+ E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVDGPLPEPSAMSATDRWILSRLNSVVAEV 627


>gi|242214731|ref|XP_002473186.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727688|gb|EED81599.1| predicted protein [Postia placenta Mad-698-R]
          Length = 397

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 153/387 (39%), Gaps = 71/387 (18%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL------DVLFTTGTDEHGQK 57
           E + I++A+ Y N  PH+G+     + AD+ AR HR   +        L+  GTDE+G  
Sbjct: 7   ENVLITSALPYCNNVPHLGNIIGSTLSADIFARAHRSHRMLGTRNRRTLYICGTDEYGTA 66

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
               A   G+T K   D+ +    +      +S+D F RT+   H + C+ ++  +   G
Sbjct: 67  TETQALKEGITPKELCDKYNALHVETYKWFQLSFDHFGRTSTPLHTEICQEIYLNLLKNG 126

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYN--------------------- 151
            + K      Y      +  D  V     + GAD    +                     
Sbjct: 127 YLDKQIKEQTYCEGCSKFLADRFVEGTCPHCGADDARGDQCDVCSRTLDAVDLINPRCLI 186

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-------HPEFILPIERRNEVI-SFVKSG 203
           ++ + V        + +L A Q K+  +           P  ++  E   E+I + +K+G
Sbjct: 187 SKAHTVTTRSSAHMYVKLDALQPKVEEWIRKSWKDGKWSPNAVINAE--GELIDARLKAG 244

Query: 204 LKDLSLSRKTFDWGIKIP----DDPQ----YIMYVWIDALTNYLTTTG---------YLD 246
           ++   ++R    WG+ +P    +D Q     ++YVW DA   Y + T          + +
Sbjct: 245 MRPSPVTRD-LTWGVPVPVVEGEDDQGMKGKVLYVWFDAPIGYPSITANYTSEWKQWWFN 303

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKIS 304
            PD    +F       +GKD + FH I+WP+  +    P      + +  ++ ++G K S
Sbjct: 304 KPDVRLYQF-------MGKDNVYFHTIFWPSIQIGDGRPWTTLYHLSTTEYLNYEGGKFS 356

Query: 305 KSLG-NVIDPIEVIEEVGVDALRYFLV 330
           KS    V  P      +     RY+L+
Sbjct: 357 KSHNRGVFGPAARETGIPPSVWRYYLI 383


>gi|12045191|ref|NP_073002.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351181|sp|P47576|SYV_MYCGE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3844913|gb|AAC71557.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078837|gb|ABY79455.1| valyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 837

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 152/355 (42%), Gaps = 66/355 (18%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  + +F  L   +D L  Y + +P+FI P +R N+ +S   + LK   +SR+   W
Sbjct: 354 VEPMLSKQWFVDLPKLKDHL--YLKKYPDFI-P-KRFNKQVSNWLNKLKPWCISRQLI-W 408

Query: 217 GIKIPDDPQYIMYVWIDA--------------LTNYLTTTGYLDNPDGSKAKFWP----- 257
           G KIP        VW +               L NY  +   LD    S    WP     
Sbjct: 409 GHKIP--------VWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSS--LWPLICLN 458

Query: 258 ---------ADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305
                     +L V G DIL F  +   + +F  +  LP  K V  HG +   +  K+SK
Sbjct: 459 WEQDDSFHETELLVTGYDILFFWVLRMLFNSFFETKKLPF-KTVLIHGLVRDEQNRKMSK 517

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N IDP+++I   G DA+R FL      G D  + +  +K   N    N + N+    
Sbjct: 518 SLNNGIDPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWN--FLNKLWNVTKFV 575

Query: 366 VSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + +     I  D D +       + S+  IL+   +V+Q+I + +       ALA  I +
Sbjct: 576 IQLENDQEISYDLDKL-------SLSETWILAKLDKVIQKITKLLDK--FQLALANQILV 626

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474
               D + +     E  K  P++    L+ T + V+  +AILL   VP L+ +I+
Sbjct: 627 KFVWDDFCNTFI--EAIKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIY 679


>gi|293376478|ref|ZP_06622707.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842048|ref|ZP_08167585.1| valine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644900|gb|EFF62981.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489770|gb|EGC92126.1| valine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 878

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 19/287 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     TT G+ D        ++P D  V G DI+ F    W + ++  +L  
Sbjct: 445 VLDTWFSSALWPFTTLGWPDVECEDFKAYFPTDTLVTGYDIIFF----WVSRMIFQSLEF 500

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DP++VIE+ G D+LRYFL    A G+D  
Sbjct: 501 TDERPFKNVLIHGLVRDAEGRKMSKSLGNGVDPMDVIEKYGADSLRYFLTTNSAPGQDLR 560

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVL 398
           Y ++ ++   N    N I N  SR V M L+    + +         +D+ IL   +  +
Sbjct: 561 YIEEKVESTWN--FINKIWN-ASRFVIMNLEGMTVEDVCLQAATLNVADKWILGRLNETI 617

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + I  N            + + + E   + Y +  K   L+  + +   +   V   V+ 
Sbjct: 618 EAINYNADKFEFGEVGRHLYNFIWEDFCNWYIEMAK-LPLQGEDEEAKRSTRMVLTYVLE 676

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
            +  LL  F+P +  +I+ ++   +   C  +    +KP F   KT 
Sbjct: 677 SIVKLLHPFMPFVTEEIYQMI-TRENTACAVAAWPVVKPEFNDAKTM 722



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 40  TIVIPPPNVTGKLHLGHAWDTSLQDIIIRMKRMQGYDALWLPGMDHAGIATQAKVDARLK 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+++             + +  M   LD S + F  T ++      R
Sbjct: 100 EQGLSRYDIGREAFLEKAWEWKEEYAGFIRQQWEKMGLSLDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G     W      A  + + ++K  +G +Y+ ++
Sbjct: 158 RVFVQLYEKGLIYRGERIINWDPAARTALSDIEVIHKEIEGAFYHFKY 205


>gi|300361442|ref|ZP_07057619.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354061|gb|EFJ69932.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 901

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +++L   ++  +     ER    ++     + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D  +    +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTDNPDFKRYFPTNT 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++   L   KK     V  HG +   +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L +  
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLAAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    +  + E+
Sbjct: 591 KPAHMPDTTQFDLADSWIFDRLNHTVSEV 619



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R++G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      R
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYANIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPELQTALSDIEVIHKDDKGAFYHVKY 204


>gi|323489964|ref|ZP_08095185.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396260|gb|EGA89085.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 877

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 15/184 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +  D   ++++P D  V G DI+ F    + + A   +   
Sbjct: 445 VLDTWFSSALWPFSTLGWPEEND-DLSRYYPTDALVTGYDIINFWVSRMIFQALEFTGEK 503

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +   +G K+SKSLGN +DP++VI + G D+LRYFL    + G+D  Y  
Sbjct: 504 PF-KDVLIHGLVRDAEGRKMSKSLGNGVDPMDVISQYGADSLRYFLATASSPGQDLRYSN 562

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           D ++   N   AN I N  SR     L + +GM    I   G  + +D  IL+  +  ++
Sbjct: 563 DKVESVWN--FANKIWN-ASR---FALMNMEGMTYDQIDLSGKKSVADSWILTRLNETIE 616

Query: 400 EIRE 403
           ++ E
Sbjct: 617 QVTE 620



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          E  K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G  IA 
Sbjct: 33 ESGKTPYTIVIPPPNVTGKLHLGHAWDTTLQDIMTRMKRMQGFDALWLPGMDHAG--IAT 90

Query: 61 AAQNAG 66
           A+  G
Sbjct: 91 QAKVEG 96


>gi|87301458|ref|ZP_01084298.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp.
           WH 5701]
 gi|87283675|gb|EAQ75629.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp.
           WH 5701]
          Length = 938

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 33/293 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYW 275
           +++  DP  ++  W  +     +T G+ D      A ++P  + V G DI+ F    +  
Sbjct: 475 LQLEQDPD-VLDTWFSSGLWPFSTLGWPDESAADLATWYPTSVLVTGFDIIFFWVARMTM 533

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A   +  +P    V  HG +      K+SKS GN IDP+ +IE  G DALR+ LVRE+A
Sbjct: 534 LAGAFTGRMPF-ADVMIHGLVRDENNRKMSKSAGNGIDPLPLIERYGADALRFALVREVA 592

Query: 335 -CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTES 386
             G+D   D D         + A    N +  +    L +  G  P       P A T +
Sbjct: 593 GAGQDIRLDYDRASGSSATVEAARNFANKLWNATRFALLNLGGETPASLGDPDPAALTLA 652

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRA 444
           D  ILS  +RV +E  E   +  +  A   +     +EV D   +  K    ++ NP  A
Sbjct: 653 DRWILSRLARVNRETAERYGSYGLGEAAKGLYEFAWNEVCDWTIELLK----RRLNPRPA 708

Query: 445 S--------------TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +                  V  +V+ +L +LL   +P L+ +++  L  A E 
Sbjct: 709 AEGEPLSNEALADQRVARQVLAKVLGELLVLLHPLMPHLSEELWHGLTGAPEG 761



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GH +E  + D + RF RL G +VL   GTD
Sbjct: 49 SVVIPPPNVTGSLHMGHGFETALIDTIVRFQRLQGKNVLCLPGTD 93


>gi|227529668|ref|ZP_03959717.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350458|gb|EEJ40749.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 885

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 23/273 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 436 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLVTGYDIIFF 495

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP++VI++ GVDA
Sbjct: 496 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDA 551

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FL+     G+D  +    +    N    N I N  SR V M L D    ++P    +
Sbjct: 552 LRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGDMPAPVLPEKSKW 608

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
             +D  ILS  +  ++++    +      A   + + +     D Y +  K  +L     
Sbjct: 609 DLADRWILSRLNATVKQVNAQFEKFEFGEAGRALYNFIWNDFCDWYIEMTKE-KLNNGTA 667

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  +    +   V+ Q+  L+   +P +  K++
Sbjct: 668 EEQANTKNILGYVLDQILKLMHPIMPFVTEKLW 700



 Score = 43.9 bits (102), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAKVEARLR 101

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++      + FV Q      + AD+         + + YD    T +K  +   R +
Sbjct: 102 KQGISRYDLGREKFVQQVWDWKDEYADIIHKQWAKMGISVDYDRERFTLDKGLNKAVRKV 161

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 162 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 207


>gi|119196555|ref|XP_001248881.1| hypothetical protein CIMG_02652 [Coccidioides immitis RS]
          Length = 1230

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 11/195 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA  
Sbjct: 353 EKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAIE 412

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            G+    +  +N    ++    L   +D   +F+  + + +  T R L+  + +KG  Y+
Sbjct: 413 RGINPATWTKENIAKMKEQLKGLGTDFDWDREFMTCSPEFYKHTQR-LFLMLHEKGLAYQ 471

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V   A+G+ + +    V+  E + +FFR++A+++ LL    
Sbjct: 472 AKAMVNYDPVDQTVLANEQV--DANGRSWRSGAV-VEKRELKQWFFRITAFKEALLKDLD 528

Query: 178 SYYESHPEFILPIER 192
           S     P+ IL ++R
Sbjct: 529 SLASGWPDRILSMQR 543


>gi|57641683|ref|YP_184161.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74506312|sp|Q5JJ31|SYI_PYRKO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57160007|dbj|BAD85937.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 1065

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 161/338 (47%), Gaps = 25/338 (7%)

Query: 159 WMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           W  E+G ++ + ++++  KL    E + E I   E   E +  ++  L    L R   D 
Sbjct: 474 WESEDGEYYVVGSFEELVKLAVAIEVNGERIDLPEGYEEKLKIIEEKLGPEDLHRPYVDA 533

Query: 217 GIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKD-IL 268
            I   +  +      ++ VW D+    + +   LD P   +   K WPAD  V G+D + 
Sbjct: 534 FIIKVNGKEMKRVKDVVDVWFDS---GIASWASLDYPRNKELFEKLWPADFIVEGEDQVT 590

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           ++      A +++ +    + V  HG++L  KG+K+SKSLGN+I P EV+++ G D  R+
Sbjct: 591 KWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRF 650

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFT 384
           +++      ++  +   GL++     + N + N+   S + M L +++   + P    F 
Sbjct: 651 YMLWATNPWENLRFSWKGLEQ--VKRMLNILWNVYVLSATYMSLDNFNPTKVNPEELPFR 708

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTN 440
           E D  ILS  + ++ E+ + ++   + RA   + + V E + R++     ++ W ++  +
Sbjct: 709 EEDRWILSRVNSLIGEVTDGIETFRLTRATRGIYNFVVEDLSRWYIRLIRKRMW-VEGDD 767

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PD+ +   Y   +V   L  L+  F P +A +I+  L 
Sbjct: 768 PDKLAA-YYTVWKVFDVLLRLMAPFTPYIAEEIYQNLI 804



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I    + A
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRSMQGYNVRRQPGFDMHGLPIEVKVEQA 100

Query: 66  -------GVTTKVFVDQNSRNFRDMA 84
                   + TK+ VD   +  ++ A
Sbjct: 101 LKLKNKREIETKIGVDNFIKKCKEFA 126


>gi|193216447|ref|YP_001999689.1| fusion of oligopeptide transport protein OppF and Valyl-tRNA
            synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001770|gb|ACF06985.1| fusion of oligopeptide transport protein OppF and Valyl-tRNA
            synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 1631

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)

Query: 157  VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            ++ +++  +F +++    +LL+ + S   F    +R   V+    +   D ++SR+ + W
Sbjct: 1138 IEILKQPQWFVKMNTLAKRLLADFNSGKGFKFIPDRFGSVLEKWMNNAHDWTISRQIW-W 1196

Query: 217  GIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
            G +IP                     DP  ++  W  +        G+  N    K +++
Sbjct: 1197 GHRIPAWYKGKKIKVQEKSPGEGWVQDPD-VLDTWFSSALAPFVFLGWPQNLTLMK-RYF 1254

Query: 257  PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
            P DL V   DI+ F    +Y+ +       P  K+VF HG +   +G KISKSL N IDP
Sbjct: 1255 PTDLLVTSYDIIFFWVARMYFQSLEFLNTKPF-KEVFIHGLLRDGQGRKISKSLRNGIDP 1313

Query: 314  IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            I++IEE GVD L+  L+  +  G+D  Y +D +K
Sbjct: 1314 IKIIEEHGVDVLKMSLIFNVTAGQDMNYGEDKIK 1347



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           ++ KL  +  +  PN   + HIGHA + +I D + R+ +L   DV++  G D  G
Sbjct: 818 DQSKLPFTIILPPPNVTGKLHIGHALDELIPDTIIRYKKLHNFDVMWVPGKDHAG 872


>gi|189218417|ref|YP_001939058.1| Leucyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189185275|gb|ACD82460.1| Leucyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 825

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    H+GH      +D++AR+ R+ G +VL   G D  G    + A
Sbjct: 38  KPKFYVLDMFPYPSGSGLHVGHLEGYTASDIIARYKRMKGFNVLHPMGWDAFGLPAEQHA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G    +   QN  NF+     +  SYD    I TT+  ++   + ++ ++ +KG  Y
Sbjct: 98  ILTGTHPALTTRQNIANFKRQIQAMGFSYDWSREINTTDPAYYKWTQWIFLRLFEKGLAY 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 WY    +    ++E+    DG      ++PV       +F +++AY +KLL   
Sbjct: 158 VAEAPVWYCPNLKTVLANEEIIHTPDGPRSERGNHPVIRKPFRQWFLKITAYAEKLLEGL 217

Query: 181 E--SHPEFILPIER 192
           E    PE I  ++R
Sbjct: 218 EKVQWPESIKEMQR 231



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 24/193 (12%)

Query: 249 DGSKAKFWPA----DLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFIL 297
              K K+W +    DL++ G +    H +Y   W   L    L   P P  ++ + G IL
Sbjct: 524 SAEKEKYWMSPQGVDLYIGGAEHAVLHLLYARFWHKVLYDIGLVSTPEPFYRLVNQGVIL 583

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            +  +K+SKS GN+++P  +I+E G D LR F +      +   +   GL+         
Sbjct: 584 GEDNQKMSKSRGNIVNPDAIIQEYGADTLRLFEMFLGPLQQSKPWSSKGLE--------- 634

Query: 357 GIGNLVSRSVSMIL-KDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           G    ++R   + + +D +GM  + T     +    I  +  + + E+ ++++N   H A
Sbjct: 635 GPHRFLARVWRLFMDEDGEGMWVLRTDIVDEQPPLPIQKLQHKTVAEVTQDIENFQFHTA 694

Query: 414 LAQVISLVSEVDR 426
           +A++++ V+E+ +
Sbjct: 695 IAKLMTFVNELTK 707


>gi|116207612|ref|XP_001229615.1| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51]
 gi|88183696|gb|EAQ91164.1| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51]
          Length = 1117

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 109/502 (21%), Positives = 191/502 (38%), Gaps = 91/502 (18%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
           ADV ARF R  GL  ++  G+D++G      A + GV       +     +D+ D   + 
Sbjct: 524 ADVFARFCRARGLPTIYVCGSDQYGTATETKALSEGVDPATLCAKYHAIHKDIYDWFRLD 583

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-------- 142
           +D F RT    H    + ++ ++ + G I +   +  Y     ++  D  V         
Sbjct: 584 FDVFGRTPTDEHTAIVQDIFTRLWNNGYIEQRETTQAYCPTHSSFLADRYVEGECSLCHD 643

Query: 143 KGADGQYYNAQHNPVQWMEEE------------GY---------------------FFRL 169
           KGA G   +A  N +  +E E            G+                     + RL
Sbjct: 644 KGARGDQCDACGNLLDPLEPERDASGNQETKATGWLINPRCKLDGTAPEKRQTKHLYLRL 703

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
            A Q ++  + ++  E        +   S++  GLK   ++R    WG+ IP        
Sbjct: 704 DALQGEIEEWLKTV-EKAWSANCVSITHSWLDQGLKPRGITRD-LKWGVPIPTG------ 755

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NLPLP 287
             +D L++           D +K  F+           + FH I +PA  L    N    
Sbjct: 756 --LDGLSDE----------DYAKKVFY-----------VWFHTIIFPASQLGTKENWTKI 792

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIACGKDGFYDKDG 345
           K V +  ++ ++G K SKS G  +       + G+DA   RY+L+       D  +  + 
Sbjct: 793 KAVSTCEYLNYEGGKFSKSKGVGVFGTNA-RDTGIDADIWRYYLLSRRPETSDSEFKWEE 851

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                N DL   +GNL  R +       DG++P      E D S      +  +E+ + +
Sbjct: 852 FVDANNNDLLKNLGNLCQRIIKFCQAKMDGVVP------EYDLSKFPALQQHREEVEKLL 905

Query: 406 QNQLIH------RALAQVISLVSEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           Q+ + H      RA   ++  +S +      D +   +L    P+R   V+ + +  I  
Sbjct: 906 QDYVAHLKAVKLRAGLSIVMNISGLGNKLLQDNKLSNQLIAEEPERCRAVIGIALNHIHL 965

Query: 458 LAILLQAFVPKLANKIFDILFV 479
           +A LL  ++P+ +  I   L V
Sbjct: 966 VAHLLSPYMPEKSQSILRQLGV 987


>gi|228968150|ref|ZP_04129153.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791542|gb|EEM39141.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 116

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
           VT K   ++    F+     L  +YD + RT  + HH+T
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHET 101


>gi|71894314|ref|YP_278422.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|90101534|sp|Q4A6B0|SYV_MYCS5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71851102|gb|AAZ43711.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 832

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 28/241 (11%)

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK- 299
           +N D    +++P+ L V G D++ F    W + ++  +L        K+VF HG I  K 
Sbjct: 454 ENDDAFFKRYYPSSLMVSGYDLIFF----WISRMIFLSLEFTNQRPFKEVFMHGLIRDKD 509

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSL N IDPIEV+E+ G DALR+FL+   A G D  Y+++ ++      ++N + 
Sbjct: 510 GRKMSKSLNNGIDPIEVVEKYGSDALRWFLITNTAPGMDIRYNQEKIESA--WKISNKLY 567

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEIRE-NMQNQLIHRALAQV 417
           N+     SM           P    E+  S LS  S+ +L ++   N Q Q + +     
Sbjct: 568 NVALYISSM-----------PDNNLEAKSSKLSEQSKWILNKLSALNKQIQKVFKTYDFS 616

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           I  V      F     W ++     ++  +    + V +++ I+L  F+P  ++ +F+ L
Sbjct: 617 IIGVEIYQFIFTDLSSWYIELI---KSLNIKNEAMYVFKKILIMLHPFLPFTSDYLFNKL 673

Query: 478 F 478
           +
Sbjct: 674 Y 674



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          PN   + H+GHA +  I D + RF +L G DVL+  G D  G
Sbjct: 41 PNVTGKLHLGHALDSYIPDTIIRFKKLSGYDVLWLPGMDHAG 82


>gi|269926588|ref|YP_003323211.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790248|gb|ACZ42389.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 891

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 170/401 (42%), Gaps = 87/401 (21%)

Query: 152 AQHNPVQWMEEEGYFFRLSAYQ------DKLLSYYES--HPEFILPIER---------RN 194
           A+ N V+ +EEEGY  R+  Y       D+  S  E     ++ L ++R         RN
Sbjct: 322 ARRNVVRRLEEEGYLVRVEDYTHSVAVCDRCESVIEPIISEQWFLRMDRLNKPALEVVRN 381

Query: 195 EVISFVKSGLK-----------DLSLSRKTFDWGIKIP---------------------- 221
           E++  +    K           D  +SR+ + WG +IP                      
Sbjct: 382 EIVRMIPDRFKQIYINWVENEHDWCISRQLW-WGHRIPIWYCHDCGHTMATDQEMLERCE 440

Query: 222 --------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI--LRFH 271
                    DP  ++  W  +    ++T G+ ++ D  +  F+P  +   G DI  L  H
Sbjct: 441 KCGSTHIEQDPD-VLDTWFSSALWPMSTLGWPEDTDDLRY-FYPTSVMETGYDIIFLWVH 498

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + +        +P    V+ HG +   KG+++SK+ GNV+DP E+ E+ G DALR+ L+
Sbjct: 499 RMIFMGLHFMGEVPF-FDVYFHGTVRDEKGQRMSKTKGNVLDPTEITEQYGSDALRFALI 557

Query: 331 REIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV-----SMILKDYDG-MIPTPGA 382
                G D    K G+ +RV A  + AN I N     +     S I    DG  +PT   
Sbjct: 558 TSAPAGSDM---KLGI-QRVEAMRNFANKIWNATRYVIRACEDSQIETGPDGDPLPTSSE 613

Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKT 439
             T +D+ I+S   R ++++   M+   +H A  ++   + SE  D Y ++ K       
Sbjct: 614 DATLADKWIISRLHRTIRDVTNMMERYQLHEAGRRLYDFIWSEYCDWYIESTKVVLAGDN 673

Query: 440 NPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            P + +   T++YV    +R    LL  ++P +  +++  L
Sbjct: 674 EPAKRAARQTLVYVLERALR----LLHPYMPFVTEELWHYL 710



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 18/120 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAAQNAGVT-------- 68
           H+GHA  + + D+L R+ R+ G   L+  G D  G      + K     G+T        
Sbjct: 56  HMGHALFVTVEDILTRWRRMQGYPTLWLPGADHAGIAGQWVVEKELAAEGLTRHDLGREK 115

Query: 69  ----TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               T  ++++     R+   +L  S D   F  T +       R  +K++ D+G IY+G
Sbjct: 116 FLERTWDWMNRYRGRIREQLRILGASCDWSRFKFTMDPEPSRAVRTAFKRLYDEGLIYRG 175


>gi|49478642|ref|YP_038508.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394711|sp|Q6HD68|SYV_BACHK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49330198|gb|AAT60844.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 881

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 48/349 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDM 594

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y + 
Sbjct: 595 KFEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEM 654

Query: 431 QKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 655 AK---LPLYGEDEAAKKTTRSILSYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|296810440|ref|XP_002845558.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842946|gb|EEQ32608.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 980

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+     YP+   H+GH     I+DVLAR+ ++ G DVL   G D  G     AA 
Sbjct: 75  KEMAYVLPMFPYPSGTLHMGHVRVYTISDVLARYKQMKGYDVLHPMGWDAFGLPAENAAI 134

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  QN  N +D    L I +  D  + T     +   + L+ K+ +KG  Y+
Sbjct: 135 ERGIHPEGWTKQNIANMKDQLKDLGIRFDWDAEVMTCAPEFYKHTQKLFLKLHEKGLAYQ 194

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V   A+G  + +    V+  E + +FFR++A+++ LL    
Sbjct: 195 AEALVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRELKQWFFRITAFKEALLKDLD 251

Query: 178 SYYESHPEFILPIER 192
           S   S P+ IL ++R
Sbjct: 252 SLSGSWPDRILTMQR 266


>gi|319790640|ref|YP_004152273.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317115142|gb|ADU97632.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 879

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 111/265 (41%), Gaps = 29/265 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +        G+ D  D  KA F+P DL V G DI+ F    W A ++      
Sbjct: 449 VLDTWFSSALWPFGVFGWPDETDDLKA-FYPTDLLVTGFDIIFF----WVARMMMMGYHF 503

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V+ H  +   KG+K+SK+ GNVIDP+E++E+ G D LR+ L    A G+D  
Sbjct: 504 TGKRPFADVYVHALVRDEKGQKMSKTKGNVIDPLEMVEKYGADTLRFTLTALAAQGRD-- 561

Query: 341 YDKDGLKKRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
                   R++  +  G     N V      +L   D      GA T     D  IL+  
Sbjct: 562 -------IRLSERIIEGYRHFANKVWNVARFVLNAADAAAVEGGASTNYAPEDLWILTKL 614

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           S   QE+   ++    + A   V   +     D Y +  K    K T  +R  T   V +
Sbjct: 615 SETAQEVDRALEGYRFNDAAKAVYQFIWNELADWYVEFTKHRLYKGTEQER-RTASQVLL 673

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+R+   LL   +P +  +I+  L
Sbjct: 674 RVLREAMKLLHPIMPFITEEIYQKL 698



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 5  EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          EK   S  +  PN     H+GHA    + DV+ R+ R++G +V +  GTD  G
Sbjct: 37 EKPKFSVVLPPPNVTGVLHVGHALNSTLQDVICRWKRMNGYEVCWVPGTDHAG 89


>gi|189083230|sp|A9L001|SYL_SHEB9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|315268747|gb|ADT95600.1| leucyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 859

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  P+ +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 208 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|257457527|ref|ZP_05622694.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444913|gb|EEV19989.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 900

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 49/413 (11%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           +   E  K A G  Y   HN V+    E +F ++    +K L+ ++   E +   ++   
Sbjct: 346 FKGKENIKHAVGHCYRC-HNVVEPYLSEQWFVKMHPLAEKALAAWKKG-ELVFYPQKWEN 403

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP------------------DDPQY----------I 227
             S     ++D  +SR+ + WG +IP                  + P            +
Sbjct: 404 TYSHWMENIRDWCISRQLW-WGHRIPVWYCQDCGKMTVSVEDVTECPHCKSTALKQDNDV 462

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANLP 285
           +  W  +     +T G+ +  +  K +++P    + G DI+ F    +   A   +  +P
Sbjct: 463 LDTWFSSWLWPFSTLGWPEKTEDFK-RYYPTSAVITGHDIIFFWVSRMIMAALEFTGTVP 521

Query: 286 LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             + ++ HG +  K G K+SKSLGN IDP+ +I+E G DAL++ L      G+D   D +
Sbjct: 522 F-RDIYLHGLVRDKQGRKMSKSLGNGIDPLNIIDEYGADALKFTLTFMCTQGQDILIDNE 580

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
             K  + +  AN I N  SR +   L+    +  +    TE D  I    +  ++ +R  
Sbjct: 581 SFK--LGSRFANKIWN-ASRYILGNLEGRRIVSVSSSELTELDRWIYHTLNETVKNVRAA 637

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAI 460
            +    +     V         D Y +  K   L   N D A  + +  V + V+ +   
Sbjct: 638 FEGYRYNEVGQSVYEFFWNNFCDWYVEGTK---LSYKNGDEAEKNRITSVLLAVLEESLR 694

Query: 461 LLQAFVPKLANKIFDIL---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           LL   +P +  +I+  L    VA  +R  ++L     P +   +       RF
Sbjct: 695 LLHPVLPFVTEEIYRKLPENCVAGASRRAEALITADYPAYCEERIDTAAAARF 747



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 25/163 (15%)

Query: 12  AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAK 60
           AI  PN     HIGH    ++ DV+ R+HR+ G + L+  GTD  G         Q  A+
Sbjct: 48  AIPPPNVTGVLHIGHGLNNVLQDVVIRYHRMKGDETLWLPGTDHAGIATQNVVERQLKAE 107

Query: 61  AAQNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                 +  + F+ +            +   R +   +D S + F  T ++      R +
Sbjct: 108 GKTRHDLGREAFLKRTWEVKEKHHAIITNQLRKIGASVDWSRERF--TMDEGLSHAVRTV 165

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151
           +  + ++G IY+G Y   W      A  +D+  ++   G  Y+
Sbjct: 166 FVSLYERGLIYRGNYLVNWCPSCGTALADDEVDHEDTKGGMYH 208


>gi|226311411|ref|YP_002771305.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094359|dbj|BAH42801.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 890

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 117/261 (44%), Gaps = 20/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  K  F+P ++ V G DI+ F    W A ++ + L  
Sbjct: 458 VLDTWFSSGLWPFSTLGWPEESEDMKY-FYPTNVLVTGYDIIFF----WVARMMFSGLEF 512

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
             K     V  HG I   +G K+SKSLGN +DP+EVIE+ G DALRY L    + G D  
Sbjct: 513 TGKSPFESVLIHGIIRDSEGRKMSKSLGNGVDPMEVIEKYGADALRYTLATGNSPGNDQR 572

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
           FY +   K   N + AN I N  SR   M L D+    I   G  +  D+ ILS     +
Sbjct: 573 FYWE---KVEANRNFANKIWN-ASRFALMNLTDFKYEEIDLSGELSTPDKWILSRLQATI 628

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++           +   + + + +   D Y +  K   L  T+     T   V V V+ 
Sbjct: 629 ADVTRLSDAFEFGESGRVLYNFIWDDLCDWYIEMAK-LPLYGTDEAAKKTTQSVLVTVLD 687

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q   LL  F+P +  +I+  L
Sbjct: 688 QTLKLLHPFMPFITEEIWQAL 708



 Score = 36.6 bits (83), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA +  + D++ R  R+ G   LF  G D  G     ++    +
Sbjct: 48  TIVIPPPNVTGKLHLGHALDTTLQDIITRTKRMQGYSALFLPGMDHAGIATQARVEATLR 107

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++                  ++       +  +   LD S + F  T ++      R
Sbjct: 108 EEGISRHDLGREKFVEKVWEWKHIYASHIREQWEKLGLALDYSRERF--TMDEGLSQAVR 165

Query: 108 ILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G     W      A  + + +YK   G  ++ ++
Sbjct: 166 EVFVRLYEKGLIYRGNRIINWDPAARTALSDIEVIYKEVKGALHHMRY 213


>gi|116629854|ref|YP_815026.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853954|ref|ZP_04644311.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851633|ref|ZP_06260998.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110508|ref|ZP_07711905.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116095436|gb|ABJ60588.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238833399|gb|EEQ25679.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557601|gb|EFB63198.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065662|gb|EFQ46002.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 879

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +++L   ++  +     ER    ++     + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQLW-WGHRIPAWY 418

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D  +    +++P + 
Sbjct: 419 NKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTDNPDFKRYFPTNT 477

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++   L   KK     V  HG +   +G K+SKSLGN +DP+
Sbjct: 478 LVTGYDIIFF----WVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNGVDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-- 372
           +V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L +  
Sbjct: 534 DVVDKYGADALRWFLLNGTAPGQDTRYDPKKLAAAWN--FINKIWN-ASRFVIMNLPEDA 590

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    +  + E+
Sbjct: 591 KPAHMPDTTKFDLADSWIFDRLNHTVSEV 619



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L RF R++G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAKVEAKLR 98

Query: 64  NAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G     +  + FV Q               +  M   LD S + F  T +K      R
Sbjct: 99  KQGKDRHQMGREAFVKQVWDWKDEYANIIKGQWAKMGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 157 KVFVQLYNEGLIYRGEYIINWDPELQTALSDIEVIHKDDKGAFYHIKY 204


>gi|217972285|ref|YP_002357036.1| leucyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782513|sp|B8E4X7|SYL_SHEB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217497420|gb|ACK45613.1| leucyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 859

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  P+ +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 208 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|325957912|ref|YP_004289378.1| isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329344|gb|ADZ08406.1| Isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 1060

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 24/283 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILR--FHAIY 274
           ++PD    ++ VWID+         Y   P+ ++   +++P D    G D  R  F++  
Sbjct: 529 RVPD----VLDVWIDSGVAGWAALHY---PEETELFDEWYPYDFITEGHDQTRGWFYSQL 581

Query: 275 WPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
               + + + P  KKV  HGF L  +G+K+SKSLGNV++P EVIE  G D LR++L+   
Sbjct: 582 GCGVITNDSTPY-KKVLMHGFTLDEEGKKMSKSLGNVVEPEEVIELYGADVLRFYLLWGN 640

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--I 390
              +D  +  D L K VN  + N + N+ V  +  M + ++D    TP      DE   I
Sbjct: 641 KPWEDLKFVWDEL-KNVNK-MFNILWNVYVFSTTYMSIDNFDPTAYTPEDVKLRDEDLWI 698

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRAST 446
            S  + + +E+ E++ +   H+A   +   + E + R++      + W ++K +PD+   
Sbjct: 699 TSRANSLAKEVTESLDSLHFHKATRAINHFILEDLSRWYIRLIRGRTW-IEKDDPDKLGA 757

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             Y     +R L + +   VP +   I+  L  + E    +S+
Sbjct: 758 -YYSLYYALRLLIVTMSPIVPHITEDIYQNLVRSVEMDALESI 799


>gi|304410296|ref|ZP_07391915.1| leucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|189083228|sp|A3D7N6|SYL_SHEB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|304351705|gb|EFM16104.1| leucyl-tRNA synthetase [Shewanella baltica OS183]
          Length = 859

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  P+ +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 208 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 263


>gi|28378904|ref|NP_785796.1| valyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254557109|ref|YP_003063526.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|81631055|sp|Q88UX7|SYV_LACPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28271741|emb|CAD64647.1| valine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254046036|gb|ACT62829.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 889

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G+  P DP+       ++  W  +     +T G+ +       +++P +  V G DIL F
Sbjct: 439 GVDGPKDPENWEQDPDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTNTLVTGYDILPF 498

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I  + G K+SKSLGN IDP++VIE+ G DA
Sbjct: 499 ----WVSRMIFQSLEFTGRRPFKNVLLHGLIRDEHGVKMSKSLGNGIDPMDVIEKYGADA 554

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FL      G+D  +    +    N    N I N  SR V M L   D   +P    +
Sbjct: 555 LRWFLSNGSTAGQDVRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGTMDKPELPAASDW 611

Query: 384 TESDESILSVCSRVLQEI 401
           T +D+ ILS  +  ++++
Sbjct: 612 TLADKWILSRLNATVKQV 629



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEAKLR 103

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+ Q             + +  M   LD S + F  T +    D  +
Sbjct: 104 EQGISRYDLGREKFIQQVWDWKDEYASIIKQQWAKMGLSLDYSRERF--TMDDGLSDAVK 161

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 162 KVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 209


>gi|160876553|ref|YP_001555869.1| leucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160862075|gb|ABX50609.1| leucyl-tRNA synthetase [Shewanella baltica OS195]
          Length = 874

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 47  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 107 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 167 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 222

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  P+ +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 223 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 278


>gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 875

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 52/312 (16%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDA 234
            +KD  +SR+ + WG +IP              D+P+               ++  W  +
Sbjct: 395 NIKDWCISRQIW-WGHRIPAWYCNNCNEIIVSEDEPKKCPKCNSSDLRQDEDVLDTWFSS 453

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KK 289
                +T G+ DN    K KF+P  + V G DI+ F    W A ++  ++ L      K 
Sbjct: 454 SLWPFSTMGWPDNTPELK-KFFPTSVLVTGFDIIYF----WVARMIMMSIALTGKEPFKN 508

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLK 347
           V  HG +   +G K+SKS+GNVIDP+++IEE G DALR+ L       G+D    K+ +K
Sbjct: 509 VIIHGLVRDSQGRKMSKSVGNVIDPMDIIEESGADALRFSLASLSNPAGQDIKMSKEKVK 568

Query: 348 KRVNADLANGIGNLVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
              N   AN + N  +R V        +Y+  I         D  ILS    V++ + + 
Sbjct: 569 GARN--FANKLWN-TARFVLGYEKYFTNYNISIEDINDMEPEDIWILSRSISVIKNLCQK 625

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +       A  +V + + +   D Y +  K    +  N  ++   + V   V +Q  I+L
Sbjct: 626 LDEYNFSAASTEVYNFIWDEFCDWYIELTK---FRINNNFKSVLAIKVLFYVFKQSLIML 682

Query: 463 QAFVPKLANKIF 474
             F+P +   ++
Sbjct: 683 HPFMPFITEDLY 694



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           +K   S  I  PN     H+GHA +  + D++ R+ RL G +VL+  GTD  G      +
Sbjct: 31  DKKAFSIVIPPPNVTGSLHLGHALDDTLQDIICRYKRLRGYEVLWLPGTDHAGIATQNVV 90

Query: 59  AKAAQNAGVT 68
            K  Q  G+T
Sbjct: 91  EKMLQKKGIT 100


>gi|291287646|ref|YP_003504462.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884806|gb|ADD68506.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 874

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 145/354 (40%), Gaps = 60/354 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    D+ +   E+    ILP        +++   ++D  +SR+ + WG +IP   
Sbjct: 362 WFIKIKPMADEAVKAVETGQIKILPETWHKTYYNWMNE-IRDWCISRQIW-WGHRIPAWY 419

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP                ++  W  +     +T G+ +  +  K KF+
Sbjct: 420 CDDCGEIVVEMEDPTECTKCGSKNLRQETDVLDTWFSSGLWPFSTQGWPEETETLK-KFY 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP------KKVFSHGFILHK-GEKISKSLGN 309
           P    + G DIL F    W A ++   L         K+V+ H  I  K G K+SKS GN
Sbjct: 479 PTSCLITGFDILFF----WVARMMMFGLKFRDGVEPFKEVYLHALIRDKDGHKMSKSKGN 534

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DGLKKRVNADLANGIGNLVSRSV 366
           VIDP+ +I++ G DA R+ L    A G+D   D+   DG +  VN          +  + 
Sbjct: 535 VIDPLTMIDKYGADAFRFTLAAFAAQGRDIKLDEARIDGYRNFVNK---------IWNAS 585

Query: 367 SMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             IL  Y+G  + +       D+ IL       Q+I +  +N   + A   +        
Sbjct: 586 RFILSGYNGQKLESFNNLEIEDKWILQNLKEAEQKISKATRNYDFNEAAGSIYQFFWHKF 645

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  KP   +  + +R    L V   V+ +  ILL  F+P L   I+ ++
Sbjct: 646 CDWYIELIKP---RIYDDERKEKALAVASYVLEKSLILLHPFMPFLTEYIYRLV 696



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + D++ RFH+L+G + ++  G D  G
Sbjct: 40 SIVIPPPNVTGSLHMGHALNNTLQDIMIRFHKLNGYETMWMPGMDHAG 87


>gi|39938504|ref|NP_950270.1| valyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39721613|dbj|BAD04103.1| valyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 680

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 31/198 (15%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY-----IMYVWIDALTNYLTTTG 243
            ++D  +SR+ + WG +IP                P++     ++  W  +     +T G
Sbjct: 201 NIEDWCISRQLW-WGHQIPAWHKGQEIKVQIESPGPEWSLDCDVLDTWFSSALWPFSTLG 259

Query: 244 YLDNPDGSKAKF---WPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL- 297
           +   P+ +   F   +P D+ V G DIL F    + + + LL+   P  K V  HG +  
Sbjct: 260 W---PNCNAPLFQNRFPTDVLVTGYDILTFWVSKMVFQSILLTHKDPF-KDVLLHGLVRD 315

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-ADLAN 356
           +KG+K+SKS GN +DP+EV+ + G DALR+FL    A G D FYD+  +    N  +   
Sbjct: 316 NKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTNAAPGFDLFYDETKVASSWNFINKLW 375

Query: 357 GIGNLVSRSVSMILKDYD 374
            I   V  + S +  D+D
Sbjct: 376 NISRFVKLNTSTLDTDFD 393


>gi|90101538|sp|Q6YRJ6|SYV_ONYPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 882

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 31/198 (15%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY-----IMYVWIDALTNYLTTTG 243
            ++D  +SR+ + WG +IP                P++     ++  W  +     +T G
Sbjct: 403 NIEDWCISRQLW-WGHQIPAWHKGQEIKVQIESPGPEWSLDCDVLDTWFSSALWPFSTLG 461

Query: 244 YLDNPDGSKAKF---WPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL- 297
           +   P+ +   F   +P D+ V G DIL F    + + + LL+   P  K V  HG +  
Sbjct: 462 W---PNCNAPLFQNRFPTDVLVTGYDILTFWVSKMVFQSILLTHKDPF-KDVLLHGLVRD 517

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-ADLAN 356
           +KG+K+SKS GN +DP+EV+ + G DALR+FL    A G D FYD+  +    N  +   
Sbjct: 518 NKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTNAAPGFDLFYDETKVASSWNFINKLW 577

Query: 357 GIGNLVSRSVSMILKDYD 374
            I   V  + S +  D+D
Sbjct: 578 NISRFVKLNTSTLDTDFD 595



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 18/101 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA+   I D++ RF ++ G DVLF  G D  G     K+ +  +
Sbjct: 36  TVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQGFDVLFLPGMDHAGIATQNKVKEQLK 95

Query: 64  NAGVTTKV------------FVDQNSRNFRDMADVLDISYD 92
             G+ TK             + +++++N R    VL +  D
Sbjct: 96  QEGLLTKTLSKEIFLKYAWQWKEEHAQNIRQQWQVLGLHLD 136


>gi|116074155|ref|ZP_01471417.1| valyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069460|gb|EAU75212.1| valyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 914

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 28/290 (9%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  ++  +  G +I  D + ++  W  +     +T G+ D       +++P    V G D
Sbjct: 442 LEKAKAEYGAGAEIEQD-EDVLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFD 500

Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    +   A   +  +P  + V+ HG +   +  K+SKS GN IDP+ +I+  G D
Sbjct: 501 IIFFWVARMTMMAGAFTGEMPF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTD 559

Query: 324 ALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT-- 379
           ALR+ LVRE+A  G+D   D D  K      + +    N +  +    L +  G  P   
Sbjct: 560 ALRFALVREVAGAGQDIRLDYDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQL 619

Query: 380 ----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
               P A   +D  ILS  +RV +E  E   +  +  A   +         D Y +  K 
Sbjct: 620 GDPDPAALQLADRWILSRLARVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK- 678

Query: 434 WELKKTNPDRAST---------VLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++ NP    +            V  +VI Q+ ++L   +P L  +++
Sbjct: 679 ---RRLNPGENPSAEALADQRVAKQVLAKVISQMHLMLHPLMPHLTEELW 725


>gi|126175469|ref|YP_001051618.1| leucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|307301993|ref|ZP_07581751.1| leucyl-tRNA synthetase [Shewanella baltica BA175]
 gi|125998674|gb|ABN62749.1| leucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|306914031|gb|EFN44452.1| leucyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 874

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 47  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 107 NNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +     PV+  E   +F +++AY ++LL+   
Sbjct: 167 KTASVNWCPNDETVLANEQV---QDGCCWRCD-TPVEQKEIPQWFIKITAYAEELLNDID 222

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  P+ +  ++R    R+E +         ++   K+FD     PD    + YV I A
Sbjct: 223 TLDGWPDQVKTMQRNWIGRSEGVEMTFG----VAGHDKSFDIYTTRPDTLMGVTYVAIAA 278


>gi|311069301|ref|YP_003974224.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869818|gb|ADP33293.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 880

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P D+ V G DI+ F
Sbjct: 432 GLEAPKDSENWEQDNDVLDTWFSSALWPFSTMGWPDITAEDFKRYYPTDVLVTGYDIIFF 491

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDQYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 TVADKWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F +        Y +FIR                 T ++  + 
Sbjct: 98  EAKLREEGTSRYDLGREKFLEETWKWKEEYAEFIRSQWAKMGLGLDYSRERFTLDEGLNK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208


>gi|313905014|ref|ZP_07838384.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470084|gb|EFR65416.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 884

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 47/263 (17%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P D+ V G DI+ F    W   ++ + +    K   H  ++H      +G K+SKSLG
Sbjct: 478 FYPTDVLVTGYDIIFF----WVIRMMFSGIEQTGKSPFHHVLIHGLVRDSQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA--DLANGIGNLVSRS 365
           N IDP+EVI++ G DALR  L+   A G D  FY      +RV A  + AN + N  SR 
Sbjct: 534 NGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFY-----WERVEASRNFANKVWN-ASRF 587

Query: 366 VSMILKDYD-------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           + M ++  +         +P P  +      IL   + + +++ ENM    +  A+ +V 
Sbjct: 588 IMMNMEGKEIPESVDVQTLPAPSKW------ILHKVNELAKDVTENMDKYELGIAVQKVH 641

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + +   D + +  KP  L     +    +L+   EV+     LL  F+P +  +I+  
Sbjct: 642 DFIWDEFCDWFIEMTKP-TLYNGTEEEKGRLLWTLREVLSTALKLLHPFMPFITEEIYCT 700

Query: 477 LFVADE------------NRCFQ 487
           L   +E            +RCF+
Sbjct: 701 LNPEEESVMVSAWPEYSADRCFR 723


>gi|313888188|ref|ZP_07821862.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845878|gb|EFR33265.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 883

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 156/362 (43%), Gaps = 50/362 (13%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  ++ +  + +F +++      L  Y      I+P ER  ++       ++D ++SR+ 
Sbjct: 350 HTVIEPLISKQWFVKMAPLAKPALEEYRKGNLNIIP-ERFGKIYENWLENIRDWNISRQL 408

Query: 214 FDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLTTTGYL 245
           + WG ++P              +DP              Q  +  W  +     +T G+ 
Sbjct: 409 W-WGHRLPVWYSDSDDEIVISREDPSNTEGHEGKTYTQDQDTLDTWFSSALWPFSTLGW- 466

Query: 246 DNPDGSKAK--FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILH-KG 300
             P+ +     F+P ++ V G DI+ F  I   + A   +  LP  K VF +G +   +G
Sbjct: 467 --PEKTPEYDYFYPTNVLVTGYDIIFFWVIRMVFSALEQTGKLPF-KDVFLNGLVRDDQG 523

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359
            K+SKSLGN IDP+++I + G DALR+ LV     G D  FY K   +   N + AN + 
Sbjct: 524 RKMSKSLGNGIDPLDIIRDYGADALRFTLVTGNTPGNDMRFYIK---RVEANRNFANKLW 580

Query: 360 NLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  +R + M + D   D            D+ I+S   +V++ I E +    I  A   +
Sbjct: 581 N-ATRFLMMNMSDEIEDSNFDV-NKLHYQDKWIISKLQKVIKSITEKIDKYDIGLAADDI 638

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP  L   + +  +  + V + V+  +  LL  F+P +  +I+ 
Sbjct: 639 YDFIWSDFCDWYIEIVKP-VLYSDDVEEKTNTVKVLLYVLENILKLLHPFMPYITEEIWQ 697

Query: 476 IL 477
            L
Sbjct: 698 AL 699


>gi|300865838|ref|ZP_07110584.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300336162|emb|CBN55742.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 912

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 27/295 (9%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDI 267
           ++  F   +KI  DP  ++  W  +     +T G+   P+ ++  A+++P      G DI
Sbjct: 447 AQAKFGENVKIEQDPD-VLDTWFSSGLWPFSTMGW---PEETQDLARYYPNTTLSTGFDI 502

Query: 268 LRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320
           + F    W A +       +  +P  K V+ HG +L   G+K +K+ GN IDP+ +I + 
Sbjct: 503 IFF----WVARMTMMAGHFTGKMPF-KTVYIHGLMLDENGKKQAKTAGNGIDPLILINKY 557

Query: 321 GVDALRYFLVREIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           G DALRY L+RE A  G+D   D +   ++    + +    N +  +   ++   +G  P
Sbjct: 558 GTDALRYALMRETAGAGQDVRLDYNRKTQESATVEASRNFTNKMWNAARFVMISLEGKTP 617

Query: 379 TP-GAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
              GA  E     D  ILS   + ++  R  ++N  +  A   +   +     D Y +  
Sbjct: 618 QQLGAPVEGLELCDGWILSRYHQTVEATRNYIENYGLGEAAKGLYEFIWGDFCDWYIELV 677

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           K   L   +P     V      V+  +  LL  F+P +  +I+  L    E  C 
Sbjct: 678 KSRLLPDADPTSKQVVQQTLAYVLEGILKLLHPFMPHITEEIWHTLTQKGEEECL 732


>gi|229823987|ref|ZP_04450056.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
 gi|229786341|gb|EEP22455.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
          Length = 880

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 19/168 (11%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D Q       ++  W  +     +T G+ D       +++P +  V G DIL F
Sbjct: 431 GMEAPADSQNWTQDPDVLDTWFSSALWPFSTMGWPDEESADFKRYFPNNTLVTGYDILTF 490

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        + V  HG I   +G K+SKSLGN +DP+++IE+ GVD+
Sbjct: 491 ----WVSRMMFQSLEFTGRRPFQNVLIHGLIRDAEGRKMSKSLGNGVDPMDIIEQYGVDS 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           LR+FL    A G+D  +  D +    N    N I N  SR V M + D
Sbjct: 547 LRWFLANGSAPGQDVRFSTDKMDAAWN--FINKIWN-ASRYVLMNVGD 591



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 13/72 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA+++ + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68  TTKVFVDQNSRN 79
            T+  V++  R 
Sbjct: 89  ATQAKVEEKLRG 100


>gi|257052895|ref|YP_003130728.1| isoleucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691658|gb|ACV11995.1| isoleucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 1068

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 27/296 (9%)

Query: 195 EVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           + +   K  + DL+++   +T++   ++PD    +  VW+D+    + + G LD P+ ++
Sbjct: 512 DAVDLHKGTVDDLTITEDGRTYE---RVPD----VFDVWLDS---SVASWGTLDYPEQTE 561

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLL--SANLPLP-KKVFSHGF-ILHKGEKISKS 306
              + WPADL +   D  R    +W    +  +A   +P  +V  HG+ ++  G  +SKS
Sbjct: 562 DFEELWPADLIMEAHDQTR--GWFWSQLGMGTAAVGEIPYDEVLMHGYAMMPDGRGMSKS 619

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            G  ++P E I E G D +R FL+ +   G+D  +  DG+   +  +L N + N+    +
Sbjct: 620 KGITVEPQEAIAEGGADPMRAFLLSQNPQGEDMRFSWDGMDS-MQRNL-NILWNVFRFPL 677

Query: 367 S-MILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             M + D+  D          + DE +LS    V  E+ E+ +++   RA+  ++  V E
Sbjct: 678 PYMRMDDFSPDETTVEDVELEQIDEWVLSRLQTVESEMGEHFEDRRQDRAIQGLMDFVVE 737

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
            V R++       +     D + T  Y T+  V+ +   LL  F P +A++I+  L
Sbjct: 738 DVSRFYVQAVRDRVWAEGEDGSKTAAYATLYRVLEETVALLAPFTPFIADEIYQYL 793


>gi|303322306|ref|XP_003071146.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110845|gb|EER29001.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320040674|gb|EFW22607.1| leucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 984

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 11/195 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA  
Sbjct: 70  EKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAIE 129

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            G+    +  +N    ++    L   +D   +F+  + + +  T R L+  + +KG  Y+
Sbjct: 130 RGINPASWTKENIAKMKEQLKGLGTDFDWDREFMTCSPEFYKHTQR-LFLMLHEKGLAYQ 188

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V   A+G+ + +    V+  E + +FFR++A+++ LL    
Sbjct: 189 AKAMVNYDPVDQTVLANEQV--DANGRSWRSGAV-VEKRELKQWFFRITAFKEALLKDLD 245

Query: 178 SYYESHPEFILPIER 192
           S     P+ IL ++R
Sbjct: 246 SLASGWPDRILSMQR 260


>gi|307150723|ref|YP_003886107.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980951|gb|ADN12832.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 908

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 26/292 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--I 273
           I++  DP  ++  W  +     +T G+   P+ +   A ++P    V G DI+ F    +
Sbjct: 458 IQLEQDPD-VLDTWFSSGLWPFSTMGW---PEQTLDLATYYPTSTLVTGFDIIFFWVARM 513

Query: 274 YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              A   +  +P  K V+ HG +    G+K+SKS  N IDP+ +I + G DALRY L+RE
Sbjct: 514 TMMAGYFTDQMPF-KDVYIHGLVRDENGKKMSKSANNGIDPLLLIRKYGSDALRYTLIRE 572

Query: 333 IA-CGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PTPGAFT 384
           +A  G+D          +  + + +    N +  +   ++ + DG        PT  A  
Sbjct: 573 VAGAGQDISLQYNRQTDESESVEASRNFANKLWNAARFVMMNLDGKTPQALGEPTSEALE 632

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD 442
            SD  ILS  +  +Q+ R  + N  +  A   +   +     D Y +  K     K++P 
Sbjct: 633 ASDRWILSRFALTVQQTRNYIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLFDKSSPS 692

Query: 443 R--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQ 491
           R  A   L   +E I +   LL  F+P +  +I+ IL   AD++   Q   Q
Sbjct: 693 RLVAQKTLAFVLEGILK---LLHPFMPHITEEIWHILTQNADQSLALQVYPQ 741


>gi|163848199|ref|YP_001636243.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526104|ref|YP_002570575.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669488|gb|ABY35854.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449983|gb|ACM54249.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 923

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 53/296 (17%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           E +F R     D  ++        I+P ER  +V       ++D  +SR+ + WG +IP 
Sbjct: 384 EQWFVRTRPLADLAIAAVRDGRVRIVP-ERFEKVYFHWLENIEDWCISRQLW-WGHRIPV 441

Query: 222 -------------DDPQY--------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                        D+P          ++  W  +     +T G+ D  D  + +F+P  +
Sbjct: 442 WYMPDGSIVVPGPDEPPPAEGVQDPDVLDTWFSSGLWPFSTLGWPDETDDYR-RFYPTSV 500

Query: 261 HVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314
              G DIL F    W A ++         P    V+ HG +  + G K+SKS GNV++P+
Sbjct: 501 METGYDILFF----WVARMMMMGCYFTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVNPL 556

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           ++IE+ G DALRY LV     G+D   +   ++   N   AN I N+    +S +     
Sbjct: 557 DIIEQYGADALRYTLVTSGTPGQDVNLNPQRIESARN--FANKIWNITRFVISKL----- 609

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           G +P     TES +    V +  LQ     + ++ I   L++   LV+EVDR  + 
Sbjct: 610 GNLPR----TESSK----VTAESLQTAGYTLADRWI---LSRYAHLVAEVDRLMEG 654



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 24/152 (15%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65
           +I  PN   + H+GHA  + I D+L R+ R+ G   L+  GTD  G     ++ K  +  
Sbjct: 49  SIPPPNVTGELHLGHAMFVAIEDLLIRWRRMQGYQTLWVPGTDHAGIATQTQVEKLLERE 108

Query: 66  GVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           G + +                 +  + +R  R +    D S + F  T +          
Sbjct: 109 GTSRQAVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWSRERF--TLDPGLSRAVHTA 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +K++ D G IY+G Y   +S + +   +D EV
Sbjct: 167 FKRLYDDGLIYRGTYLVNWSPKLQTAVSDLEV 198


>gi|300813517|ref|ZP_07093854.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512371|gb|EFK39534.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 372

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVID 312
           F+P D+ V G DI+ F  I      L     LP K V  +G +  + G K+SKSLGN ID
Sbjct: 46  FFPTDVLVTGYDIIFFWVIRMVFSSLEQMGQLPFKDVLLNGLVRDELGRKMSKSLGNGID 105

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           P+++I+E G DALR+ LV     G D  FY K     R  A+        +  ++S  + 
Sbjct: 106 PLDIIDEYGADALRFTLVTGNTPGNDMRFYIKRVESSRNFANKLWNATRFIMMNLSDDIS 165

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           D + +I       + D+ I+S   + ++ I E +    I  A A +   +     D Y +
Sbjct: 166 DSNFLI---DELQDQDKWIISKLEKTIKSITEKIDKYEIGLAAADIYDFIWSDFCDWYIE 222

Query: 430 AQKP---WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             KP    E +KTN  +   +L+V   +++    LL  F+P +  +I+  L
Sbjct: 223 MVKPVLYSEGQKTNTQKV--LLFVLENILK----LLHPFMPFITEEIWQTL 267


>gi|196034490|ref|ZP_03101899.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228948172|ref|ZP_04110456.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993032|gb|EDX56991.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228811530|gb|EEM57867.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 881

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 54/352 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFI--LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   +K +   +   E +  +P    N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTD 481

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDP 313
             V G DI+ F    W + ++   L        K V  HG +   +G K+SKSLGN IDP
Sbjct: 482 ALVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDP 537

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DA+R+FL    A G+D  +  + ++   N    N I N    +   +L + 
Sbjct: 538 MDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN----ASRFVLMNM 591

Query: 374 DGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           D M    I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y
Sbjct: 592 DNMKYEEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWY 651

Query: 428 FDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L     D A+  T   +   V+ Q   LL  F+P +  KI+  L
Sbjct: 652 IEMAK---LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A+  G 
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  +   D     F + A      Y   IR                 T +K   D   
Sbjct: 101 LREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEVQGAFYHMNY 208


>gi|241894967|ref|ZP_04782263.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871685|gb|EER75436.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 888

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 28/276 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P D  V G DI+ F
Sbjct: 436 GMEAPADAENWEQDSDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTDTLVTGYDIIFF 495

Query: 271 HAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
               W A ++      +   P  K V  HG I   +G K+SKSLGN IDP++VIE+ G D
Sbjct: 496 ----WVARMMFQSKEFTGRRPF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGAD 550

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+FL      G+D  +    +    N    N I N  SR V M L D D     P   
Sbjct: 551 ALRWFLATGSTPGQDVRFSYTKMDSAWN--FINKIWN-ASRYVLMNLSD-DTKAELPADR 606

Query: 384 TE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           T+   +D+ ILS  +  +  + +N        A   + + +     D Y +  K   L  
Sbjct: 607 TKLSLADQWILSRLNATIAAVTKNFDKFEFGEAGRALYNFIWNDFADWYIEMTKE-TLNG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            + D  +TV  +   V+     LL   +P +   I+
Sbjct: 666 DDADAQTTVQSILAYVLDNTLRLLHPIMPFVTEAIW 701



 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 41  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEQRLA 100

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++      + FV+Q      + A           L + YD    T ++   +  R +
Sbjct: 101 EDGISRYDLGREKFVEQVWDWKNEYAATIKSQWGKLGLSLDYDRERFTLDEGLSEAVRKV 160

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +  + +KG IY+G Y   +  +     +D EV ++  +G +Y+ Q+
Sbjct: 161 FVTLYEKGLIYRGEYIINWDPKARTALSDIEVIHQDDEGAFYHVQY 206


>gi|256847984|ref|ZP_05553428.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715044|gb|EEU30021.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 887

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 24/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 437 GMEAPKDAENWEQDHDVLDTWFSSALWPFSTMGWPDTDAPDYKRYFPTSTLVTGYDIIFF 496

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VI + GVDALR+
Sbjct: 497 WVSRMIFQSLEFTGKAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIAKYGVDALRW 555

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGA 382
           FLV     G+D  +    +    N    N I N  SR V M L   DGM     +P    
Sbjct: 556 FLVTGSTPGQDIRFSYKKMDAAWN--FINKIWN-ASRYVIMNL---DGMEHAPQLPDKSK 609

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           +  +D  IL+  +  +Q++    +      A   + + +     D Y +  K  +L    
Sbjct: 610 WDLADRWILAKLNATVQQVNAQFEKFEFGEAGRALYNFIWNDFCDWYIEMSKE-KLTNGT 668

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           P        +   V+ Q   L+   +P +  K++
Sbjct: 669 PTEKEDTKNILAYVLDQTLKLIHPIMPFVTEKLW 702



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 43  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAKVEARLR 102

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++      + FV Q      + AD+         + + YD    T ++  +   R +
Sbjct: 103 KQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 162

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 163 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 208


>gi|149202271|ref|ZP_01879244.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144369|gb|EDM32400.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 1039

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 37/308 (12%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239
           ++ +E R+  +  +   L D + ++           DP +++Y VW D        ++ L
Sbjct: 571 VVEVESRDAALHRLAGALADYTATQ-----------DPTHLVYPVWRDPDVLDTWFSSGL 619

Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFI 296
              G L  P+ +    K++P  + + G DI+ F    W A ++     +  +K F+H ++
Sbjct: 620 WPIGTLGWPENTAELQKYFPTSVLITGFDIIFF----WVARMMMMQYAVVGQKPFAHVYV 675

Query: 297 L-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  KG+K+SKSLGNV+DP+++IE+ G DA+R+ L    A G+D    K+ +    N
Sbjct: 676 HALVRDEKGKKMSKSLGNVLDPLDLIEDYGTDAVRFTLTSMAAMGRDLKLSKERIAGYRN 735

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                 + N    +         G +P P A    ++ I+   ++    + E ++N   +
Sbjct: 736 --FTTKLWNAARFAEMNGAVGSAGTVPAPTATV--NKWIIGETAKTRATVDEALENFRFN 791

Query: 412 RALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   + + V  +  D Y +  KP  L      +A T   +   VI Q  ILL   +P +
Sbjct: 792 DAANALYAFVWGTVCDWYVEFSKPLLLDGDAATKAETQATMAW-VIDQCLILLHPIMPFV 850

Query: 470 ANKIFDIL 477
             +++  L
Sbjct: 851 TEELWGTL 858



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           +AG+
Sbjct: 40 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGHDTLWQPGQD-----------HAGI 88

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 89 ATQMVVER 96


>gi|298492495|ref|YP_003722672.1| valyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234413|gb|ADI65549.1| valyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 1006

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 22/286 (7%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  ++  F   +K+  DP  ++  W  +     +T G+ +     +  ++P    V G D
Sbjct: 447 LEKAKSQFGEEVKLEQDPD-VLDTWFSSGLWPFSTLGWPEQTQDVET-YYPTTTLVTGFD 504

Query: 267 ILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
           I+ F    W A +       +  +P  K V+ HG +     +K+SKS  N IDP+ ++++
Sbjct: 505 IIFF----WVARMTMMAGHFTGEMPF-KTVYIHGLVRDENNKKMSKSANNGIDPLLLMDK 559

Query: 320 VGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            G DALRY LV+E+A  G+D   + D  K + ++ + +    N +  +   ++ + DG  
Sbjct: 560 YGTDALRYTLVKEVAGAGQDIRLEYDRKKDESISVEASRNFANKLWNAARFVMMNLDGQT 619

Query: 378 PT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
           P     P     SD+ I+S   +V+++    + N  +  A   +   +     D Y +  
Sbjct: 620 PVQLGKPALTELSDKWIISRYHQVVRQTNNYIDNYGLGEAAKGLYEFIWGDFCDWYIELV 679

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K    K  +P        +  E++  +  LL  F+P +  +I+  L
Sbjct: 680 KSRLQKDADPASRKVAQQILAEILEGVLKLLHPFMPHITEEIWQTL 725



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          HIGHA+E  + D L R+HR+ G + L+  GTD     +    +N
Sbjct: 56 HIGHAFESALIDTLVRYHRMKGHNTLWVPGTDHASIAVQTILEN 99


>gi|84490249|ref|YP_448481.1| isoleucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373568|gb|ABC57838.1| IleS [Methanosphaera stadtmanae DSM 3091]
          Length = 1055

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 25/284 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++PD    ++ VWID+         Y  NP  +  +++P D    G D  R         
Sbjct: 521 RVPD----VLDVWIDSGVAGWAALHYPQNPSENFDEWFPYDFITEGHDQTRGWFYSQLGL 576

Query: 279 LLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            ++A    P KKV  HGF L + G+K+SKSLGNV+ P EVIE+ G D LR++L+      
Sbjct: 577 GVAAFGKAPYKKVLMHGFTLDEDGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLDANKPW 636

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESIL 391
            D  +  D ++   ++ L N + N+   + + +    D   PT        F E D  I 
Sbjct: 637 DDLKFHWDEVQN--SSKLFNILWNVYYFATTYM--SLDNFNPTKHNRDDLIFREEDLWIE 692

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDR--AS 445
           S  + +++ + E++++ + +RA  ++   + E + R++      + W ++  +PD+  A 
Sbjct: 693 SRINSLIKSVGEDIESLVFNRATEKITDFILEDLSRWYVRLIRGRTW-VESDDPDKLGAY 751

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LY T   ++ L ++L    P +  +I+  L    E    +S+
Sbjct: 752 YTLYYT---LKNLIMVLAPISPHVTEEIYQNLVRGVEEDAPESV 792


>gi|294784265|ref|ZP_06749560.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294488131|gb|EFG35482.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 887

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 172/402 (42%), Gaps = 53/402 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L+++ ++   E    A GQ Y  Q   ++      +F ++    +K L    +    ILP
Sbjct: 326 LKEQGFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            +R  ++       ++D  +SR+ + WG +IP                            
Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275
               +  + ++  W  +     +T G+   P+ +K    F+P    V G DI+ F     
Sbjct: 443 DVELNQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARM 499

Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             F +     +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   
Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNT 559

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391
           + G+D  +  D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+
Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL- 448
           S  +   +++++ ++   +  A   V   +     D Y +  K   L   + D+  + L 
Sbjct: 617 SRLNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLT 675

Query: 449 --YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             Y+   V+ Q   LL  F+P +  +I+  + V  +    Q+
Sbjct: 676 AQYMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717


>gi|194468301|ref|ZP_03074287.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453154|gb|EDX42052.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 884

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 14/197 (7%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P +  V G DI+ F
Sbjct: 435 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLVTGYDIIFF 494

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VI++ GVDALR+
Sbjct: 495 WVSRMIFQSLEFTGRAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 553

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+     G+D  +    +    N    N I N  SR V M L +    ++P    +  +
Sbjct: 554 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPVLPDKSKWDLA 610

Query: 387 DESILSVCSRVLQEIRE 403
           D+ ILS  +  ++++ E
Sbjct: 611 DQWILSRLNATVKQVNE 627



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 100

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++        FV Q      + AD+         + + YD    T ++  +   R +
Sbjct: 101 KQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 160

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 161 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 206


>gi|260426547|ref|ZP_05780526.1| valyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260421039|gb|EEX14290.1| valyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 1025

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 19/253 (7%)

Query: 235 LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            ++ L   G L  P+ ++   K++P D+ V G+DIL F    W A ++   L +  ++  
Sbjct: 600 FSSGLWPIGTLGWPEKTRELEKYFPTDVLVTGQDILFF----WVARMMMMQLAVVDEIPF 655

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           H   LH      KG+K+SKSLGNV+DP+E+I+E G DALR+      + G  G    D  
Sbjct: 656 HTVYLHGLVRDAKGKKMSKSLGNVVDPLEIIDEYGADALRFTNAAMASLG--GVLKLDMQ 713

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +     +    + N    +         G +P P A    +  IL   +RV + +   M 
Sbjct: 714 RIAGYRNFGTKLWNAARFAEMNGAVGLGGGVPAPQATV--NRWILGETARVREAVDAAMA 771

Query: 407 NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A   + + V  V  D Y +  KP    +    +A T   ++  VI Q  ILL  
Sbjct: 772 EYRFNDAAQALYAFVWGVVCDWYVEFSKPLLQGEDAAAKAETQATMSW-VIDQCLILLHP 830

Query: 465 FVPKLANKIFDIL 477
            +P +  +++  L
Sbjct: 831 IMPFITEELWATL 843



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           +AG+
Sbjct: 39 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGYDTLWQPGQD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERE 96


>gi|323478896|gb|ADX78335.1| valyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 880

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G+++P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEVPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|325571587|ref|ZP_08147087.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156063|gb|EGC68259.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 943

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 18/264 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D  +    +++P +  V G DI+ F    W + ++  
Sbjct: 506 DPD-VLDTWFSSALWPFSTMGWPDENNEDFQRYFPTNTLVTGYDIIAF----WVSRMIFQ 560

Query: 283 NLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L    K     V  HG I   +G K+SKSLGN IDP+EVIE+ G DALR+FL    A G
Sbjct: 561 SLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEQYGADALRWFLSNGSAPG 620

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCS 395
           +D  +  + +    N    N I N  SR V M + +  +  I   G  + +D  IL+  +
Sbjct: 621 QDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNVSEMTEEDIDFSGEKSVADRWILTRLN 677

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++++ +  +      A  Q+ + + +   D Y +  K   L   N         + V 
Sbjct: 678 ETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYIEMSKE-TLYGDNEAAKQVNKSILVH 736

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+ Q+  LL   +P +  +I+  L
Sbjct: 737 VLDQILRLLHPIMPFVTEEIWSKL 760



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 104 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAKVEEKLR 163

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FV+Q               +  +   LD S + F  T +    +  R
Sbjct: 164 EQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKLGLSLDYSRERF--TLDDGLSEAVR 221

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 222 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 269


>gi|254431649|ref|ZP_05045352.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626102|gb|EDY38661.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 929

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 20/279 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYW 275
           +++  DP  ++  W  +     +T G+ D+     A ++P  + V G DI+ F    +  
Sbjct: 480 LQLEQDPD-VLDTWFSSGLWPFSTLGWPDDTSVDLAAWYPTSVLVTGFDIIFFWVARMTM 538

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A   +  +P  + V+ HG +      K+SKS GN IDP+ +IE  G DALR+ LVRE+A
Sbjct: 539 MAGAFTGRMPF-RDVYIHGLVRDENNRKMSKSAGNGIDPLPLIERYGADALRFALVREVA 597

Query: 335 -CGKDGFYD---KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFT 384
             G+D   D    DG    V  + A    N +  +    L +  G  P+           
Sbjct: 598 GAGQDIRLDYDRNDGSSGTV--ETARNFANKLWNATRFALMNLGGETPSSLGRPLTAELE 655

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D  ILS  +R  ++  E   +  +  A   +         D+Y +  KP  L   +P 
Sbjct: 656 SEDRWILSRLARTAEQAAELYGSYRLGEAAKLLYEFAWNDLCDQYIEWAKP-RLAGEDPA 714

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +    V    +  L ++L   +P L  +++  +  A+
Sbjct: 715 ARTAARRVLAHSLEALLVMLHPLMPHLTEELWHAVTRAE 753



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GH +E  + D + RF RL G +VL   GTD
Sbjct: 54 SVVIPPPNVTGSLHMGHGFETALIDTIVRFQRLRGRNVLCLPGTD 98


>gi|295112120|emb|CBL28870.1| valyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 883

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 22/231 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308
           F+P  L V G DI+     +W A ++   L     +P K V+ H  I   KG+K+SKS G
Sbjct: 478 FYPTSLMVTGFDII----FFWVARMIMMGLEFMDEVPFKDVYIHSLIRDEKGDKMSKSKG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP+ +I++ G DALR  L      G+D     D ++   +    N + N  +R   M
Sbjct: 534 NVIDPLVMIDQYGADALRMALAALSTQGRDILLSSDKIETYRH--FMNKLWN-AARFALM 590

Query: 369 ILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
            L D     P P         D  IL+ C  V Q+I + +    I  A   +        
Sbjct: 591 NLDDE----PQPIDRARLRLQDRWILTRCQEVTQKITKCIDGYDIGEAARSLYDFTWGDV 646

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D Y +  KP       P+R  T   V  EV + L  LL  F+P +  +++
Sbjct: 647 CDWYIEMSKPALRGDEGPERRRTAQGVLDEVFKTLLPLLHPFIPFVTEELW 697



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 28/196 (14%)

Query: 6   KLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           K   S  I  PN     H+GHA+     D+L R  R+ G  VL+  GTD  G      + 
Sbjct: 38  KEAFSIVIPPPNVTGSLHMGHAFNNTFQDILCRTKRMQGYSVLWLPGTDHAGIATQNVVE 97

Query: 60  KAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           K     G+T                 +V+ D+  +  + + +  D   + F  T ++   
Sbjct: 98  KDLAKKGLTRHDLGREAFVKKVWEWKEVYGDRIIKQMKRLGNSCDWRRERF--TFDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEE 162
              R ++ ++  K  IYKG Y   +  R     +D EV Y+   G++Y  ++    ++ E
Sbjct: 156 RAVRAVFVRLYKKDLIYKGKYIINWCSRCHTALSDLEVEYREMPGKFYYVRY---PFVGE 212

Query: 163 EGYFFRLSAYQDKLLS 178
           EG     +   + +L 
Sbjct: 213 EGSLLVATTRPETILG 228


>gi|269865191|ref|XP_002651837.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063784|gb|EED42218.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 193

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++ K  D  D
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIFLKTIDHFD 124


>gi|300087851|ref|YP_003758373.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527584|gb|ADJ26052.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 1015

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 12/257 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF----WPADLHVIGKDILR--FHAIYWPAFLL 280
           ++  W D+    +    Y  +PD S+  F    +PAD      D  R  F++++  + LL
Sbjct: 544 VIDCWFDSGAMPVAQYHYPFDPD-SRGIFDDGRFPADYICEAIDQTRGWFYSLHALSTLL 602

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  + V   G IL  KGEK+SKS GNV+ P  VI++ G DA+R++L      G   
Sbjct: 603 FGR-PSFQNVICLGHILDGKGEKMSKSRGNVVTPESVIDKHGADAVRWYLFTASPAGNAR 661

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVL 398
            + +  L K V+    + + N+ S  V    +  YD   P P   +E D  ILS  ++++
Sbjct: 662 RFSEQ-LVKEVSRSFMSTLWNVYSFFVLYANIDKYDPSGPEPPVVSELDRWILSELNQLI 720

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQ 457
            E+ ENM+N         + S V  +  ++  +      K+  D    +  Y   + + +
Sbjct: 721 AEVTENMENYDPVSGARAMESFVDYLSNWYVRRSRRRFWKSESDADKLSAYYALYQCLVK 780

Query: 458 LAILLQAFVPKLANKIF 474
            A LL  F+P LA+ I+
Sbjct: 781 TAQLLAPFLPFLADTIY 797


>gi|34762740|ref|ZP_00143729.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887590|gb|EAA24670.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 887

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 167/388 (43%), Gaps = 53/388 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L+++ ++   E    A GQ Y  Q   ++      +F ++    +K L    +    ILP
Sbjct: 326 LKEQGFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            +R  ++       ++D  +SR+ + WG +IP                            
Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275
               +  + ++  W  +     +T G+   P+ +K    F+P    V G DI+ F     
Sbjct: 443 DVELNQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARM 499

Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             F +     +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   
Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNT 559

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391
           + G+D  +  D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+
Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL- 448
           S  +   +++++ ++   +  A   V   +     D Y +  K   L   + D+  + L 
Sbjct: 617 SRLNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLT 675

Query: 449 --YVTVEVIRQLAILLQAFVPKLANKIF 474
             Y+   V+ Q   LL  F+P +  +I+
Sbjct: 676 AQYMLWTVLEQGLRLLHPFMPFITEEIW 703


>gi|295698309|ref|YP_003602964.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157462|gb|ADD79907.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 865

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  +   YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 33  KKKKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARCQRMLGKNVLHPMGWDSFGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   V+   +  +N RN +D    L +SYD    + T E  ++   +  + K+ +KG IY
Sbjct: 93  KRNKVSAFHWTVENIRNMKDQLKKLGLSYDWSRELSTCEPNYYRWEQWFFTKLYEKGLIY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           K      +   D+    +++V  G+    +G+    + N +QW      F +++ Y ++L
Sbjct: 153 KKLTEVNWCPTDKTVLANEQVVNGSCWYCEGKI--ERKNQLQW------FIKITQYSEEL 204

Query: 177 LS 178
           L 
Sbjct: 205 LQ 206


>gi|295109458|emb|CBL23411.1| valyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 884

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 17/239 (7%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P D+ V G DI+ F  I   + A   +  +P    V  HG +   +G K+SKSLGN I
Sbjct: 477 FYPTDVLVTGYDIIFFWVIRMVFSALEQTGEVPF-HHVLIHGLVRDSQGRKMSKSLGNGI 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR  L+   A G D  +  + ++   N   AN I N  SR + M L+
Sbjct: 536 DPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN--FANKIWN-ASRFIMMNLE 592

Query: 372 DYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                +  P    +    D+ ILS  + V++++ +NM    +  A+ +V   + +   D 
Sbjct: 593 --GKTVTEPADLNDLCFEDKWILSKLNTVIRDVTDNMDKYELGIAVQKVYDFLWDELCDW 650

Query: 427 YFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y +  K   L K + D   A+  L+     + +   LL  ++P +  +I+  L    E+
Sbjct: 651 YIEMAKV-RLWKADEDLKAANDALWTLRTALTEGLKLLHPYMPFITEEIYCTLLPEQES 708



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA +  + D+L RF R+ G + L+  GTD           +A + T+V V
Sbjct: 46  PNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTD-----------HAAIATEVKV 94

Query: 74  DQNSRNFRDMADVLDISYDDFIR 96
               +  ++  D  DI  ++F++
Sbjct: 95  IDKLK--KEGIDKHDIGREEFLK 115


>gi|86607800|ref|YP_476562.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556342|gb|ABD01299.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 912

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 137/304 (45%), Gaps = 30/304 (9%)

Query: 200 VKSGLKDLSLSRKTFDWGI-KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            ++G + L  +R+ F   + ++  DP  ++  W  +     +T G+ +  +  K +++P 
Sbjct: 442 ARNGEEALLKAREKFGPEVERVEQDPD-VLDTWFSSALWPFSTLGWPEETEDFK-RYYPN 499

Query: 259 DLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
            L   G DI+ F    W A +       +  +P  K V+ +G +  + G K+SK+ GN I
Sbjct: 500 SLMSTGFDIIFF----WVARMAMMGSQFTGQIPF-KDVYINGLVRDEHGAKMSKTKGNGI 554

Query: 312 DPIEVIEEVGVDALRYFLVRE-IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           DP+E++++ G DALRY LV+E +  G+D    +  K G    V A  A    N +  +  
Sbjct: 555 DPLELLDKYGTDALRYALVKEVVGAGQDIRLAYDRKTGESASVEA--ARNFANKIWNASR 612

Query: 368 MILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +L + +G        P P A   +D  ILS       ++   ++   +      + SL+
Sbjct: 613 FVLMNLEGQTPAQLGSPAPEALELADRWILSRLHSTATQVIAELEAYGLGEGARLLYSLI 672

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  KP  L+  +         V   V+  +  LL  ++P +  +I+ +L  
Sbjct: 673 WDDFCDWYIELVKP-RLRGEDLASKRAAQKVLATVLETILKLLHPWMPHITEEIWQLLTQ 731

Query: 480 ADEN 483
           A++ 
Sbjct: 732 ANQT 735


>gi|78214062|ref|YP_382841.1| valyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78198521|gb|ABB36286.1| valyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 914

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    +   A   +  +
Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  + V+ HG +   +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D
Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579

Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D  K      + +    N +  +    L +  G  P       P A   +D  ILS  +
Sbjct: 580 YDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLA 639

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446
           RV +E  E   +  +  A   +         D Y +  K    ++ NP    +       
Sbjct: 640 RVSRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 695

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474
                V  +VI Q+ ++L   +P L  +++
Sbjct: 696 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 725


>gi|42526872|ref|NP_971970.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81412332|sp|Q73MZ2|SYV_TREDE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41817187|gb|AAS11881.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 909

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 157/387 (40%), Gaps = 68/387 (17%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L +   + ++E  K A G  Y   H  ++    + +F ++     K L  ++       P
Sbjct: 344 LEELGLFKNEEKIKHAVGCCYRC-HTSIEPYVSKQWFVKMQPLAQKALDAWKKGDVVFYP 402

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            +  N    ++ + ++D  +SR+ + WG +IP                            
Sbjct: 403 QKWENTYAHWM-NNIRDWCISRQLW-WGHRIPVWYCADCGKTIVSRTDITECPHCKSKNI 460

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +     +T G+ +  +   A+F+P    V G DI+ F    W A ++ 
Sbjct: 461 KQDEDVLDTWFSSWLWPFSTLGWPEKTE-DLARFFPTSALVTGHDIIFF----WVARMIM 515

Query: 282 ANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A+L        K +F HG +  K G K+SKSLGN IDP+  IEE G DA+++ L     C
Sbjct: 516 ASLQFTGKAPFKDIFIHGLVRDKQGRKMSKSLGNGIDPLVAIEEFGADAMKFTLT--FMC 573

Query: 336 G---KDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFT 384
           G   +D   D +  K  + +  AN +        GNL  R++  + +D      +  +  
Sbjct: 574 GSQSQDFLIDMESFK--LGSKFANKVWNASRYILGNLAGRTIVPVGRD-----GSLNSLK 626

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK---KT 439
           E D  I    +   Q +R ++ +   + A  +V         D Y +  K    K   + 
Sbjct: 627 ELDRWIYHELNEAAQTVRSSLDSYRYNEAAQKVYEFFWNNFCDWYVEGTK-LSFKYGDEK 685

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFV 466
             DRA++VL   +E   +L     AFV
Sbjct: 686 EKDRAASVLLAVLEESLRLLHPFLAFV 712



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 17/89 (19%)

Query: 2   KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K+  K   +  I  PN     H+GHA +  + DV+ R+HR+ G + L+  GTD       
Sbjct: 38  KKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTD------- 90

Query: 60  KAAQNAGVTTKVFVDQ----NSRNFRDMA 84
               +AG+ T+  V++      +N RD+ 
Sbjct: 91  ----HAGIATQSVVEKKLKAEGKNRRDLG 115


>gi|194017123|ref|ZP_03055735.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010991|gb|EDW20561.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 880

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P +L V G DI+ F
Sbjct: 432 GLEAPEDIENWEQDNDVLDTWFSSALWPFSTMGWPDADSEDFKRYYPTNLLVTGYDIIFF 491

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L        K V  HG I   +G K+SKSLGN IDP+EVI++ G D+
Sbjct: 492 ----WVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADS 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LRYFL    + G+D  +  + ++   N   AN I N    +    L + DG+    +   
Sbjct: 548 LRYFLATGSSPGQDLRFSFEKVESTWN--FANKIWN----ASRFALMNMDGLTYDELDLT 601

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L  
Sbjct: 602 GEKSVADQWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPL 658

Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 659 YGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 43  TVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTCR 107
             GV+      + FV+   +   + AD            LD S + F  T ++  +   R
Sbjct: 103 EEGVSRYDLGREKFVEGTWKWKEEYADFIRSQWAKMGLGLDYSRERF--TLDEGLNKAVR 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 161 QVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208


>gi|302037068|ref|YP_003797390.1| valyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605132|emb|CBK41465.1| Valyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 920

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 18/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +     +T G+       K  F+P    V G DIL F    W A ++   L  
Sbjct: 479 VLDTWFSSALWPFSTLGWPKQTADLKT-FYPTSTLVTGLDILFF----WVARMIMMGLKF 533

Query: 286 ---LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + V+ H  +   +G+K+SKS GNVIDP+ V+E+ G DALR+ +    + G+D  
Sbjct: 534 MGEVPFRDVYIHALVRDAEGQKMSKSKGNVIDPLHVMEQFGTDALRFTMAAMASPGRDVK 593

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             ++ ++   N    N I N  +R + M L      +P     +  D  ILS  +  +  
Sbjct: 594 LAEERIEGYRN--FTNKIWN-AARFLLMHLDGERAEVPA-AQRSFPDRWILSRLNAAIST 649

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   ++     RA + +   +     D+Y +  KP  LK    ++A T      E    +
Sbjct: 650 VTHELEQYRFDRASSAIYQFIWHEYCDKYIEMIKP-ALKDQASEQAKTTRQTLAETFETM 708

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  F+P ++ +I+  L
Sbjct: 709 MRLLHPFMPFISEEIWQTL 727



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQN 64
           S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G   Q + +    
Sbjct: 41  SMVIPPPNVTGSLHVGHALNNTLQDILIRWRRMQGRNVLWMPGTDHAGIATQNVVERQLQ 100

Query: 65  AGVTTK 70
           A  TT+
Sbjct: 101 AEGTTR 106


>gi|257420570|ref|ZP_05597560.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257162394|gb|EEU92354.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156411|gb|EFU00428.1| valyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 880

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 146/345 (42%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ D       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K     +   D+ +T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKEILYGENEADKQTT-RSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|239981255|ref|ZP_04703779.1| methionine--tRNA ligase [Streptomyces albus J1074]
          Length = 650

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 198/514 (38%), Gaps = 76/514 (14%)

Query: 16  PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN   H+GH A   + AD+LAR  R  G +  + TGTD+H   +A AA+  G T      
Sbjct: 138 PNGGLHLGHLAGPYVRADMLARALRSMGREARYVTGTDDHQSYVAAAARLRGTTPAEVAT 197

Query: 75  QNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKIS--------DKGDIYKGCYS 125
                         ++ D   R   +  H    R L +K++        ++   Y  C +
Sbjct: 198 AEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPAAKEEERPTAY--CPT 255

Query: 126 GWYSLRDE-AYYNDDEVYKGADGQYYNAQHNPVQWME-----------------EEGYFF 167
              SL    A          +DG+   A   P +  E                 E   + 
Sbjct: 256 CALSLHQAFARGRCAHCDAASDGEICEACGRPNEARELSAAHCRICGTEAVTRTERALWL 315

Query: 168 RLSAYQDKLLSYYE---SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            L AY  +L  Y     + P+ +  +ER       +  GL    L R T +WG+ + D  
Sbjct: 316 DLDAYAAELREYLRLAHTPPDLLTLVER------LLDEGLPAYRLGRTT-EWGVDLGDG- 367

Query: 225 QYIMYVWID-ALTNYLTTTGYLDNPDGSKAKFWPADLHV-IGKDILRFHAIYWPAFLLSA 282
              +  W D ALT       +LD       +  PA + + +G D   ++A+  P    +A
Sbjct: 368 -QALDAWADLALT-------FLDAARTESEQNGPARIALFLGYDNSFYYAVLLPVLAFAA 419

Query: 283 NLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            L   LP    ++ F+    EK S S G+ +   + +   G DA+R  L+RE        
Sbjct: 420 GLADHLPAAFVTNQFLHLGDEKFSTSRGHAVWADDALAAAGPDAVRLALLREA------- 472

Query: 341 YDKDGLKKRVNADLANGIG-NLVSRSVSMILKDY------DG-MIPTPGAFTESDESI-- 390
              +G   R+ A+ A  +  + + R+    L  +      DG ++P  GA+T+       
Sbjct: 473 --PEGRVTRITAERAGQLTEDPLYRAAHAWLDGFAASAGEDGAVVPGTGAWTDVHREFYR 530

Query: 391 -LSVCSRVLQEIRENMQNQLIHRA-LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            L++ +R L  +   +      R+ + Q+ S V+    +  A++      +  + A T L
Sbjct: 531 YLNLATRQLDGLL--LPESFSARSYVDQLESFVTRCAEFRAAEQALRATPSLAEEARTSL 588

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +     +  A L     P LA ++++ L +  E
Sbjct: 589 ALEYLAAKVFAALAWPITPGLAQRVWEWLGLPGE 622


>gi|310827210|ref|YP_003959567.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
 gi|308738944|gb|ADO36604.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
          Length = 882

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 18/239 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSL 307
           KF+P D+ V G DI+ F    W A ++   L     +P   V+ HG I   +G K+SKSL
Sbjct: 476 KFYPNDVLVTGYDIIFF----WVARMIFMGLYNMGEVPFADVYIHGLIRDSQGRKMSKSL 531

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP+E+IE+   DALR+ ++   + G D  +  + L+   N    N I N  +R V 
Sbjct: 532 GNGIDPLEIIEQFSADALRFSIITGNSAGNDIRWQDEKLEASRN--FLNKIWN-AARFVL 588

Query: 368 MILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
           M L +   D           +D+ ILS  + V++++ +NM    +  A  +V        
Sbjct: 589 MNLDENIMDQQDAALANLENTDKWILSRMNDVVRDVTQNMDKYELGIAAQKVYDFAWNEY 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            D Y +  KP  L   +    +   Y    V+  +  LL   +P +  +I+  L  A E
Sbjct: 649 CDWYIELVKP-RLYGDDETTKAAAQYTLNLVLTNILKLLHPVIPFITEEIYGYLPGAGE 706



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 26/106 (24%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA++  + DVL RF R+ G   L+  G D           +A + T+V V
Sbjct: 46  PNITGQLHMGHAFDDTLQDVLTRFKRMQGYAALWVPGMD-----------HASIATEVKV 94

Query: 74  DQNSRN-------------FRDMADVLDISYDDFIRTTEKRHHDTC 106
            +  RN             F   A    ++Y D IR   K+   +C
Sbjct: 95  VEKIRNEEGKTKEELGREEFLKRAWDWALTYKDRIREQVKKLGASC 140


>gi|237739887|ref|ZP_04570368.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423495|gb|EEO38542.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 887

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 169/404 (41%), Gaps = 57/404 (14%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L+++ ++   E    A GQ Y  Q   ++      +F ++    +K L    +    ILP
Sbjct: 326 LKEQGFFIKTEHLHHAVGQCYRCQ-TVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            +R  ++       ++D  +SR+ + WG +IP                            
Sbjct: 385 -KRMEKIYYNWLENIRDWCISRQIW-WGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGH 442

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYW 275
                  + ++  W  +     +T G+   P+ +K    F+P +  V G DI+ F     
Sbjct: 443 DVELSQEEDVLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARM 499

Query: 276 PAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             F +     +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   
Sbjct: 500 IMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNT 559

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESIL 391
           + G+D  +  D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+
Sbjct: 560 SQGQDVHFSTDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWII 616

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS---- 445
           S  +   +++ + ++   +  A   V   +     D Y +  K   ++  N D       
Sbjct: 617 SRLNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISK 673

Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            T  Y+   ++ Q   LL  F+P +  +I+  + V  E    Q 
Sbjct: 674 LTAQYMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQQ 717


>gi|256378981|ref|YP_003102641.1| methionyl-tRNA synthetase-like protein [Actinosynnema mirum DSM
           43827]
 gi|255923284|gb|ACU38795.1| methionyl-tRNA synthetase-like protein [Actinosynnema mirum DSM
           43827]
          Length = 327

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           GVD LR+ LVR +          + + +R   +L   +G LV R V M+ + Y G  P  
Sbjct: 167 GVDVLRWSLVRGV---------DEAVARR---ELGRELGGLVDRVVVMVHR-YRGGTPPD 213

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                  E +++VC+   + +R  +       A  +V  +V   +RY +  +PWEL ++ 
Sbjct: 214 AGPPRGSEELVAVCAGAREGVRGALARFDFGAAAGEVWRVVQMANRYLEVSRPWELSRSA 273

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             R  +VL V +   R LA+ L  F P LA ++ +
Sbjct: 274 DPRVDSVLAVLLAACRVLAVELTPFAPGLAARVAE 308


>gi|332180370|gb|AEE16058.1| Valyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 938

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 53/266 (19%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK L+ +++      P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 394 WFVKMKPLADKALAAWKNGEIVFYPRKWENTYSHWMEN-IRDWCISRQLW-WGHRIPVWY 451

Query: 222 ----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
                                        DP  ++  W  +     +T G+ +N  G   
Sbjct: 452 CKKCGEMIVSRTDPDSCPKCGAAAADLAQDPD-VLDTWFSSWLWPFSTLGWPEN-TGDLQ 509

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSL 307
           +F+P    V   DI+ F    W + ++ A L    K     ++ HG +  K G K+SKSL
Sbjct: 510 RFYPTTALVTAYDIIFF----WVSRMIMAGLEFTGKAPFRDIYIHGLVRDKQGRKMSKSL 565

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP+E+I E G DAL++ L    A G+D   DK+  K      L +   N V  +  
Sbjct: 566 GNGLDPLEIIAEYGSDALKFTLGFMCAQGQDVLVDKESFK------LGSRFANKVWNASR 619

Query: 368 MILKDYDGMIPTPGAFTESDESILSV 393
            IL + +G    P   T+SD + L V
Sbjct: 620 YILGNLEGRELVP--VTDSDLTELDV 643



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 16/87 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH     + D++ R+HR+ G D L+  GTD           +AG+ T+  V++  R  
Sbjct: 69  HMGHGLNNTLQDIVVRYHRMKGDDTLWLPGTD-----------HAGIATQNVVER--RLK 115

Query: 81  RDMADVLDISYDDFIRTT---EKRHHD 104
           ++     D+  + F+  T   +K HHD
Sbjct: 116 KEGLSRRDLGREKFLERTWAVKKEHHD 142


>gi|299535625|ref|ZP_07048946.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728825|gb|EFI69379.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 881

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  +    +++P +  V G DI+ F    W + ++   L  
Sbjct: 448 VLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLVTGYDIIFF----WVSRMIFQGLEF 503

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DP++VIE+ G D+LRYFL    + G+D  
Sbjct: 504 TDQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFLATGSSPGQDLR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396
           Y  + ++   N   AN I N    +    L + DGM    I   G  + +D+ IL+  + 
Sbjct: 564 YTTEKVEAVWN--FANKIWN----ASRFALMNMDGMTYDEIDLTGEKSVADKWILTRLNE 617

Query: 397 VLQEI 401
            ++ +
Sbjct: 618 TIERV 622



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 33/172 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G      A  A V
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAG-----IATQAKV 96

Query: 68  TTKVFVDQNSR---------------------NFRDMADVLDISYDDFIR---TTEKRHH 103
             K+  D  +R                     + RD    L +   D+ R   T +K   
Sbjct: 97  EAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGL-DYTRERFTLDKGLS 155

Query: 104 DTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           D  + ++ ++ +KG IY+G     W      A  + + +Y+   G +Y+ ++
Sbjct: 156 DAVKTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIYQDVQGAFYHMKY 207


>gi|261209049|ref|ZP_05923453.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566557|ref|ZP_06446979.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293557231|ref|ZP_06675779.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|294615719|ref|ZP_06695572.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617315|ref|ZP_06696955.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260076961|gb|EEW64684.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161656|gb|EFD09534.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591439|gb|EFF23095.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596424|gb|EFF27677.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291600595|gb|EFF30899.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 881

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 144/346 (41%), Gaps = 47/346 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIE 315
              V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP+E
Sbjct: 479 STLVTGYDIIFFWVSRMIFQSLEFTGERPF-ENVLIHGLIRDEQGRKMSKSLGNGIDPME 537

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +G
Sbjct: 538 VIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NIEG 591

Query: 376 M----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           M    I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D Y +
Sbjct: 592 MTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 652 MSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|315150958|gb|EFT94974.1| valyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 880

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 17/271 (6%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTES 386
           FL    A G+D  +  + +    N    N I N  SR V M ++   D  I   G  T +
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIMNVEGMTDADIDFSGEKTVA 606

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N    
Sbjct: 607 DRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENEAAK 665

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            T   + V  + Q+  LL   +P +  +I++
Sbjct: 666 QTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|291485223|dbj|BAI86298.1| valyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 880

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F +        Y DFIR                 T ++    
Sbjct: 98  EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208


>gi|291453113|ref|ZP_06592503.1| tRNA synthetase [Streptomyces albus J1074]
 gi|291356062|gb|EFE82964.1| tRNA synthetase [Streptomyces albus J1074]
          Length = 640

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 198/514 (38%), Gaps = 76/514 (14%)

Query: 16  PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN   H+GH A   + AD+LAR  R  G +  + TGTD+H   +A AA+  G T      
Sbjct: 128 PNGGLHLGHLAGPYVRADMLARALRSMGREARYVTGTDDHQSYVAAAARLRGTTPAEVAT 187

Query: 75  QNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKIS--------DKGDIYKGCYS 125
                         ++ D   R   +  H    R L +K++        ++   Y  C +
Sbjct: 188 AEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPAAKEEERPTAY--CPT 245

Query: 126 GWYSLRDE-AYYNDDEVYKGADGQYYNAQHNPVQWME-----------------EEGYFF 167
              SL    A          +DG+   A   P +  E                 E   + 
Sbjct: 246 CALSLHQAFARGRCAHCDAASDGEICEACGRPNEARELSAAHCRICGTEAVTRTERALWL 305

Query: 168 RLSAYQDKLLSYYE---SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            L AY  +L  Y     + P+ +  +ER       +  GL    L R T +WG+ + D  
Sbjct: 306 DLDAYAAELREYLRLAHTPPDLLTLVER------LLDEGLPAYRLGRTT-EWGVDLGDG- 357

Query: 225 QYIMYVWID-ALTNYLTTTGYLDNPDGSKAKFWPADLHV-IGKDILRFHAIYWPAFLLSA 282
              +  W D ALT       +LD       +  PA + + +G D   ++A+  P    +A
Sbjct: 358 -QALDAWADLALT-------FLDAARTESEQNGPARIALFLGYDNSFYYAVLLPVLAFAA 409

Query: 283 NLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            L   LP    ++ F+    EK S S G+ +   + +   G DA+R  L+RE        
Sbjct: 410 GLADHLPAAFVTNQFLHLGDEKFSTSRGHAVWADDALAAAGPDAVRLALLREA------- 462

Query: 341 YDKDGLKKRVNADLANGIG-NLVSRSVSMILKDY------DG-MIPTPGAFTESDESI-- 390
              +G   R+ A+ A  +  + + R+    L  +      DG ++P  GA+T+       
Sbjct: 463 --PEGRVTRITAERAGQLTEDPLYRAAHAWLDGFAASAGEDGAVVPGTGAWTDVHREFYR 520

Query: 391 -LSVCSRVLQEIRENMQNQLIHRA-LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            L++ +R L  +   +      R+ + Q+ S V+    +  A++      +  + A T L
Sbjct: 521 YLNLATRQLDGLL--LPESFSARSYVDQLESFVTRCAEFRAAEQALRATPSLAEEARTSL 578

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +     +  A L     P LA ++++ L +  E
Sbjct: 579 ALEYLAAKVFAALAWPITPGLAQRVWEWLGLPGE 612


>gi|78185780|ref|YP_378214.1| valyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78170074|gb|ABB27171.1| Valyl-tRNA synthetase, class Ia [Synechococcus sp. CC9902]
          Length = 925

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 19/266 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    +   A   +  +
Sbjct: 472 VLDTWFSSGLWPFSTLGWPDANAPDLNRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 531

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  K V+ HG +   +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D
Sbjct: 532 PF-KDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLD 590

Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D  K      + +    N +  +    L +  G  P       P A   +D  ILS  +
Sbjct: 591 YDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLA 650

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVL 448
           RV +E      +  +  A   +         D Y +  K       NP   +     T  
Sbjct: 651 RVNRETAGRYGSYALGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRTAK 710

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
            V  +VI Q+ ++L   +P L  +++
Sbjct: 711 QVLAKVISQMHLMLHPLMPHLTEELW 736


>gi|293567619|ref|ZP_06678963.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291589720|gb|EFF21524.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 881

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 53/349 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312
              V G DI+ F    W + ++  +L        + V  HG I   +G K+SKSLGN ID
Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   +
Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588

Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +GM    I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D 
Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|257885020|ref|ZP_05664673.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820872|gb|EEV48006.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 881

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 53/349 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312
              V G DI+ F    W + ++  +L        + V  HG I   +G K+SKSLGN ID
Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   +
Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588

Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +GM    I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D 
Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|69246247|ref|ZP_00603860.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879526|ref|ZP_05659179.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883460|ref|ZP_05663113.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890246|ref|ZP_05669899.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894823|ref|ZP_05674476.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258616812|ref|ZP_05714582.1| valyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559758|ref|ZP_05831938.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293559745|ref|ZP_06676266.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622457|ref|ZP_06701479.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938905|ref|ZP_07846172.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943091|ref|ZP_07849892.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948112|ref|ZP_07851513.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951622|ref|ZP_07854667.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993873|ref|ZP_07859207.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996714|ref|ZP_07861737.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195348|gb|EAN09797.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813754|gb|EEV42512.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819118|gb|EEV46446.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826606|gb|EEV53232.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257831202|gb|EEV57809.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074426|gb|EEW62748.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291598004|gb|EFF29114.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291606293|gb|EFF35706.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589152|gb|EFR67997.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591683|gb|EFR70528.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596218|gb|EFR75063.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598193|gb|EFR77038.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641779|gb|EFS06359.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645448|gb|EFS10028.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 881

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 53/349 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312
              V G DI+ F    W + ++  +L        + V  HG I   +G K+SKSLGN ID
Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   +
Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588

Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +GM    I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D 
Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|221310749|ref|ZP_03592596.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315074|ref|ZP_03596879.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319993|ref|ZP_03601287.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324275|ref|ZP_03605569.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767644|ref|NP_390687.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|251757438|sp|Q05873|SYV_BACSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|225185272|emb|CAB14769.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F +        Y DFIR                 T ++    
Sbjct: 98  EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208


>gi|158521740|ref|YP_001529610.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510566|gb|ABW67533.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 884

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 21/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD ++    F+P  + V G DIL F    W A +L   L
Sbjct: 452 VLDTWFSSALWPFSTLGW---PDRTRLLETFYPTSVLVTGFDILFF----WVARMLMMGL 504

Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              K++  H   +H      +G+K+SKS GNVIDPI++I   G DALR+ L    A G+D
Sbjct: 505 HFMKEIPFHDVYIHALVRDEEGKKMSKSTGNVIDPIDIINTYGADALRFTLTAFAAQGRD 564

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               +  ++   +    N + N    ++  + + Y+   P P     +D  ILS      
Sbjct: 565 IKLSESRIEGYRH--FINKLWNAARFAMMHVDRGYEE--PPPANAGLADRWILSRLDNAR 620

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   + +     + A   +   V     D Y +A KP    K   ++      V   V+R
Sbjct: 621 KSTADALDTYRFNDAAGALYQFVWHELCDWYLEAAKPDLYGKNGEEQKEKTKQVLWHVLR 680

Query: 457 QLAILLQAFVPKLANKIFDIL 477
              +LL   +P +  +I+  L
Sbjct: 681 DTLVLLHPIIPFVTEEIWHAL 701



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 18/90 (20%)

Query: 3   EREKLYI-----------STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTT 49
           E+EKL+            S  I  PN     H+GHA  + + D+L R+ RL G +VL+  
Sbjct: 24  EKEKLFAASEEGHGRPGYSIVIPPPNVTGMLHMGHALNITLQDILCRYRRLCGDNVLWVP 83

Query: 50  GTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79
           GTD  G     A QN  V  K+  +   R+
Sbjct: 84  GTDHAG----IATQNV-VEKKLMAEGTDRH 108


>gi|452309|emb|CAA54458.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F +        Y DFIR                 T ++    
Sbjct: 98  EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208


>gi|258569569|ref|XP_002543588.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903858|gb|EEP78259.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 964

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA 
Sbjct: 72  REKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAI 131

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    + ++N    ++    L   +            D  R L+  + +KG  Y+  
Sbjct: 132 ERGINPADWTEENIAKMKEQLKALGTEF------------DWDRRLFLMLHEKGLAYQAK 179

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL----SY 179
               Y   D+    +++V   A+G  + +    V+  E + +FFR++A+++ LL    S 
Sbjct: 180 AMVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRELKQWFFRITAFKEALLKDLDSL 236

Query: 180 YESHPEFILPIER 192
            +  PE IL ++R
Sbjct: 237 ADGWPERILSMQR 249


>gi|284047776|ref|YP_003398115.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283951997|gb|ADB46800.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 884

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 151/362 (41%), Gaps = 51/362 (14%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLL-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           H+ V+ M    +F ++    +  +    E H EF+ P       + ++++ + D  +SR+
Sbjct: 354 HHVVEPMVSTQWFVKMKPLAEAAIKCVTEGHTEFV-PSRFTKTYLQWMEN-IHDWCISRQ 411

Query: 213 TFDWGIKIP----DDPQYI------------------------MYVWIDALTNYLTTTGY 244
            + WG +IP    DD   +                        +  W  +     +T G+
Sbjct: 412 IW-WGHRIPVWYCDDCGEVAASRTDLTACPKCGSTHIHQEEDCLDTWFSSGLWPFSTFGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------ANLPLPKKVFSHGFIL- 297
            D  +     ++P  + V G DI+ F    W A +++         P  K VF HG +  
Sbjct: 471 PDKTE-ELEHWYPTSVLVTGYDIIFF----WVARMITMGEEFMGKEPF-KHVFIHGLVRD 524

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN IDP+EV+ + G D LR+ L+     G D  +  + ++   N   AN 
Sbjct: 525 EQGRKMSKSLGNGIDPVEVVNQYGADTLRFMLITGNTPGNDMRFYWNRIESTRN--FANK 582

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N  SR   M L  YD         T +D+ ILS     +Q++   ++   +  A   +
Sbjct: 583 IWN-ASRFALMNLDGYD-KDAEKAPLTLADKWILSRLQHTIQDVSTYLEKFELGEAGRLI 640

Query: 418 ISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +  EV D Y +  KP    + N    +T   V   V+     LL  ++P +  +I+ 
Sbjct: 641 YDFIWGEVCDWYIELAKPRLYDRENAPARATAQTVLCRVLGDAMKLLHPYMPFITEEIWQ 700

Query: 476 IL 477
            L
Sbjct: 701 HL 702


>gi|326407749|gb|ADZ64820.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 46/278 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K   H  ++H      +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  D +    N    N I N VSR + M  +D             S +++ S  ++V  +
Sbjct: 559 FSYDKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NP 441
              N+ ++ I   L      V+E +D++             +D    W L+ T       
Sbjct: 604 TAGNVTDRWILTRLNDTARRVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGE 663

Query: 442 DRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A   +   V + V+ Q+  LL   +P    +IF+ L
Sbjct: 664 DEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+A    
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G+  +             + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158

Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           ++ ++ +KG IY+G     W      A  + + ++K  DG +Y+
Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202


>gi|218282236|ref|ZP_03488535.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
 gi|218216774|gb|EEC90312.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
          Length = 870

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 42/272 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR-NEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221
           +F ++    +++L   E   + I  +  R N+        ++D  +SR+ + WG +IP  
Sbjct: 358 WFVKMKPLAEEVLKNQEIEDQRINFVPSRFNKTFEQWLENIEDWCISRQLW-WGHRIPAW 416

Query: 222 ------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                       +DP+ I         +  W  +     +T G+ +       +++P D+
Sbjct: 417 TNKETGEIYVGMEDPKDIENWKQDEDVLDTWFSSALWPFSTLGWPETT-ADLERYFPNDV 475

Query: 261 HVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
            V G DI+ F    W A +         N P  K V  HG +   +G K+SKSLGN IDP
Sbjct: 476 LVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLIHGLVRDTQGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI+E G DALR+FL      G+D  +D+  +    N    N I N  +R V M + D 
Sbjct: 531 MDVIQEKGADALRFFLTTNSTPGQDLRFDETKMDASWN--FINKIWN-AARYVQMQIGDT 587

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              +    A    D+ IL+  + VL  +  NM
Sbjct: 588 KPELDMTKA-NSVDKWILARFNEVLDHVSTNM 618



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 16/97 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  + D+L R+ RL G DV +  G D           +AG+ T+  VD  +R  
Sbjct: 50  HLGHAWDTTLQDILCRYKRLKGYDVCWVAGMD-----------HAGIATQAKVD--ARLK 96

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114
            +     DI  + F+      ++ +  T R  W K+ 
Sbjct: 97  SEGISRYDIGREKFLERAWEWKEEYASTIRSQWAKLG 133


>gi|321312340|ref|YP_004204627.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018614|gb|ADV93600.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFF 491

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKAAQNAG 66
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G    AK      
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCRIL 109
              K   D     F +        Y DFIR                 T ++      R +
Sbjct: 103 EEGKPRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSKAVREV 162

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           + K+ +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 163 FVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208


>gi|157693210|ref|YP_001487672.1| valyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681968|gb|ABV63112.1| valine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P +L V G DI+ F
Sbjct: 432 GLEAPEDIENWEQDNDVLDTWFSSALWPFSTMGWPDAESEDFKRYYPTNLLVTGYDIIFF 491

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L        K V  HG I   +G K+SKSLGN IDP+EVI++ G D+
Sbjct: 492 ----WVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADS 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LRYFL    + G+D  +  + ++   N   AN I N    +    L + DG+    +   
Sbjct: 548 LRYFLATGSSPGQDLRFSFEKVESTWN--FANKIWN----ASRFALMNMDGLTYDELDLI 601

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L  
Sbjct: 602 GEKSVADQWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPL 658

Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 659 YGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 43  TVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV-----------LDISYDDFIRTTEKRHHDTCR 107
             GV+      + FV++  +   + AD            LD S + F  T ++  +   R
Sbjct: 103 EEGVSRYDLGREKFVEETWKWKEEYADFIRSQWAKMGLGLDYSRERF--TLDEGLNKAVR 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 161 QVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208


>gi|257083370|ref|ZP_05577731.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256991400|gb|EEU78702.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315171826|gb|EFU15843.1| valyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327536084|gb|AEA94918.1| valine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|238019263|ref|ZP_04599689.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
 gi|237863962|gb|EEP65252.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
          Length = 822

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y D+LL+
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLT 204



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ AN P  + + + G +L +G K+SKS GNV+ P E+I   G D  R F++      +D
Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +   G++         G    + R V  I+  Y  +      G  T+ + ++     R
Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIVDAYNEEAKKNVTGELTKDEFALRRELHR 668

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVS 422
           V++++ E++ N    + A++ ++ LV+
Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVN 695


>gi|315148803|gb|EFT92819.1| valyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|256618285|ref|ZP_05475131.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597812|gb|EEU16988.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|315032301|gb|EFT44233.1| valyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315145977|gb|EFT89993.1| valyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|308807252|ref|XP_003080937.1| tRNA synthetase class I (ISS) [Ostreococcus tauri]
 gi|116059398|emb|CAL55105.1| tRNA synthetase class I (ISS) [Ostreococcus tauri]
          Length = 985

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 27/272 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +        F+PA +   G DIL F    W A ++  +  +
Sbjct: 528 VLDTWFSSGLWPFSTCGWPNEEAPDMKNFFPASVLETGHDILFF----WVARMIMMSYGM 583

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K+  H   LH      +G K+SKSLGNV+DP+ VI E G DALR+ L    A G+D  
Sbjct: 584 TGKLPFHTVYLHGLVRDAQGRKMSKSLGNVVDPLGVISEQGCDALRFTLATGTAPGQDLN 643

Query: 341 YDKDGLKKRVNADLANGI---GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            + + L    N +  N I   G  V  S+  I  D    +   GA   +D + ++     
Sbjct: 644 LNLERLAS--NRNFTNKIWNAGKFVLYSLEEITHDERVALVDEGAALCADAASIAKLPLA 701

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDR-----YFDAQKPW-------ELKKTNPDRAS 445
            + I   +   + H   +Q      E  R     ++D+   W        L   + D A 
Sbjct: 702 ERWIVSKLNATVDHVTASQDRYDFGEAGRATYSFFYDSIADWFIEGAKSRLYGGDADAAR 761

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               VT+ V+ +   LL  FVP +  +++  L
Sbjct: 762 VTKAVTLYVLDRTLRLLHPFVPYVTEEVWQAL 793


>gi|116333862|ref|YP_795389.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099209|gb|ABJ64358.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 888

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 9/185 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLL 280
           DP  ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   
Sbjct: 451 DPD-VLDTWFSSALWPFSTMGWPDEDSADFKRYFPTSTLVTGYDIIFFWVSRMMFQSLEF 509

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  K V  HG I   +G K+SKSLGN IDP+EVI++ G DALR+FL      G+D 
Sbjct: 510 TGKRPF-KNVLLHGLIRDEEGRKMSKSLGNGIDPMEVIDKYGADALRWFLSTGSTAGQDV 568

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVL 398
            +    +    N    N I N  SR V M L D    ++P    +  +D+ ILS  +  +
Sbjct: 569 RFSYTKMDAAWN--FINKIWN-ASRFVIMNLGDKTQPVLPAAETWDLTDKWILSRLNDTV 625

Query: 399 QEIRE 403
           + + E
Sbjct: 626 KHVTE 630



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 43  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 102

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV      + D   + +  M   LD S + F  T +    D  +
Sbjct: 103 EQGISRYDLGREKFVEKVWEWKDEYADTIHKQWAKMGLSLDYSRERF--TLDDGLSDAVK 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 161 KVFVTLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 208


>gi|296331646|ref|ZP_06874115.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675395|ref|YP_003867067.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151241|gb|EFG92121.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413639|gb|ADM38758.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDITAEDFKRYYPTDVLVTGYDIIFF 491

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 SVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F +        Y DFIR                 T ++    
Sbjct: 98  EAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMSY 208


>gi|119713330|gb|ABL97394.1| leucine-tRNA synthetase [uncultured marine bacterium EB80_02D08]
          Length = 804

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 8/194 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y  +   YP+ + H+GH     I DV++R+ R++  +V    G D  G     AA
Sbjct: 30  DREKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V+ K + +QN  + +     L + YD    +RT E  ++   ++++KK  D   +Y
Sbjct: 90  IANKVSPKEWTNQNIEHMKQQLISLGLGYDWSKELRTCEPEYYKWEQLIFKKFYDNNLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V  G  G    AQ   V+  E + +F +++ Y ++LL+  
Sbjct: 150 RKKSMVNWDPVDETVLANEQVIDGK-GWRSGAQ---VEIKEIDQWFIKITDYAEELLTSL 205

Query: 181 ES--HPEFILPIER 192
           +    PE +  ++R
Sbjct: 206 DEVDWPENVKTMQR 219



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 10/101 (9%)

Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
            T++   D      +K+W P DL++ G +    H +Y   F        L+  N P  KK
Sbjct: 491 FTSSDNADQMFDKNSKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDMGLVEGNEPF-KK 549

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN +DP   IE+ G D +R +++
Sbjct: 550 LLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMM 590


>gi|330684035|gb|EGG95792.1| valine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 223 VLDTWFSSALWPFSTLGWPDVEAEDFKRYFPTNALVTGYDIIFF----WVARMIFQGLEF 278

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    A G+D  
Sbjct: 279 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSAPGQDLR 338

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 339 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 396

Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              ++ +  +   + RAL   I      D Y +  K   +   + D+  T   V   V+ 
Sbjct: 397 TVTDLSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEDQKQTTRSVLSYVLD 454

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +  KI+  L
Sbjct: 455 RIMRMLHPFMPFVTEKIWQSL 475


>gi|300721316|ref|YP_003710587.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
           [Xenorhabdus nematophila ATCC 19061]
 gi|297627804|emb|CBJ88335.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
           [Xenorhabdus nematophila ATCC 19061]
          Length = 670

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 117/546 (21%), Positives = 201/546 (36%), Gaps = 51/546 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R  L  ST    PN   H+GH +   +  DVL R     G  V   TG D++   +  +
Sbjct: 120 QRNTLIFSTPPT-PNGDLHLGHLSGPYLAGDVLKRVLLQSGTSVHHGTGRDDNQTYVVTS 178

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH-----HDTCRILWKK--IS 114
           A           D  +    +      I +D FI    +       H    +L+KK  I 
Sbjct: 179 AAKEQRQPTESADFYASAINETWQGFGIDFDLFITPDNQGEYADFVHHYIELLYKKDFIY 238

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWME----------- 161
           +K       + G  +   EAY +    Y  + +DG    A   P +  +           
Sbjct: 239 EKETTAYVDHHG--NTLHEAYIHGLCPYCEESSDGNACEACGRPNECTDLKQPQVKADGN 296

Query: 162 ------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                 E   +FRLSA+  +L  Y ++     +P          +   L D+ +S  +  
Sbjct: 297 QPLSRKEFRLYFRLSAFAHQLAQYVQTAN---MPAHVHQLCHDMLSQQLPDICISHAS-H 352

Query: 216 WGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGK 265
           WGIK  +P+  Q ++YVW +    YL          G+      AD+        H  G 
Sbjct: 353 WGIKHRLPNYEQQVVYVWFEMAMGYLWAASEYPTSRGNNRMEKAADVYSGDTNIVHCYGF 412

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           D   +H + +PA   +  L  P+    +  +  +G K S S  ++I   + ++  G D  
Sbjct: 413 DNAYYHTLLFPAIYFALGLTPPQTHIVNELLDLEGSKFSTSRRHLIWGKDFLKLAGADYA 472

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R  L+     G    +  + +   +NA     + + +S     +++ Y G IP  GA+  
Sbjct: 473 RMALILMRPEGIRENFSVERVAATMNALFPQRLSHWLSSLQECVMR-YGGKIPESGAWLA 531

Query: 386 SDESILSVCSRVLQEIRENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNP-- 441
             ++       V+   +   Q +     R    V  L+    R+  +Q+    + +N   
Sbjct: 532 DQKNHYYELLHVMTSYQHFSQTENFSPRRMAEHVTKLIDMAYRFNASQRHLFPRNSNALS 591

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML-- 499
           + A T L + V   R L   L+  +P L+  I  +L +      +Q     L    M+  
Sbjct: 592 NYARTALALDVLAARMLVYALKPLMPALSADIAALLRINATEETWQQATTFLASQHMIQP 651

Query: 500 HKTFDP 505
           HK   P
Sbjct: 652 HKIMLP 657


>gi|312136980|ref|YP_004004317.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224699|gb|ADP77555.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 931

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 49/319 (15%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA------------ 234
           I+P E R  +  F+K  LKD + +RK    G K+P D ++I+    D+            
Sbjct: 469 IVPDEIRQNIEYFIK-WLKDWACARK-IGLGTKLPWDKRWIVEPLTDSTIYMAYYTIAHK 526

Query: 235 --------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
                   L +      +L+NPD   A ++P D  +  KD++  H  +   F  SA  P 
Sbjct: 527 IKEKDHEELNSEYFDEVFLNNPDEEFAYWYPLDWRLSAKDLIGNHLTF-HIFHHSAIFPE 585

Query: 286 --LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              PK +   G  L +G+K+S S GN++   E I E G D +R FL+      +D  + K
Sbjct: 586 DKWPKGIVVFGMGLLEGQKMSSSKGNIVTLSEAISEYGADVVRMFLMSSAEPWQDFDWRK 645

Query: 344 D---GLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               G+K+R+    +L   I   +  +    L+        P  F   ++ ILS  ++ +
Sbjct: 646 KEVIGVKRRIEQFFELYEKIDEKIGLNFENKLE------IRPKKFI--NKWILSQVNQRI 697

Query: 399 QEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIR 456
           + + E ++     +AL +   L   +VD Y    KPW EL++T          +   V++
Sbjct: 698 KNVTEALEKFQTRKALQEGFFLFRKDVDHYLKRVKPWIELEETKE--------ILRYVMK 749

Query: 457 QLAILLQAFVPKLANKIFD 475
               L+  F+P +A +I++
Sbjct: 750 VWVKLVAPFIPHIAEEIWE 768



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          +++K++I+ A  YP+   H+GH     + DV ARF R+ G +VLF       G  +   A
Sbjct: 26 DKKKIFITVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAPVVGIA 85

Query: 63 Q 63
          +
Sbjct: 86 K 86


>gi|281492830|ref|YP_003354810.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376482|gb|ADA65968.1| Valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 40/275 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K+   HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KRALIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGTDALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D +    N    N I N VSR + M  +D             S +++ S  ++V  +   
Sbjct: 562 DKMDAAWN--FINKIWN-VSRYILMNAEDV------------SADAVSSALTKVANKTAG 606

Query: 404 NMQNQLIHRALAQVISLVSE-VDRY-------------FDAQKPWELKKT-----NPDRA 444
           N+ ++ I   L   +  V+E +D++             +D    W L+ T       D A
Sbjct: 607 NVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEFANWYLELTKEVMFGEDEA 666

Query: 445 STVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   V + V+ Q+  LL   +P    +IF+ L
Sbjct: 667 EKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+A    
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVAARLA 99

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G+  +             + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSQAVRK 158

Query: 109 LWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           ++ ++ +KG IY+G     W      A  + + ++K  DG +Y+
Sbjct: 159 VFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIHKEIDGAFYH 202


>gi|269123133|ref|YP_003305710.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314459|gb|ACZ00833.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 865

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 11/199 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K +E  Y     AYP+ + H GH     I D +AR+ ++ G +VL T G D  G     
Sbjct: 30  VKGKENYYTLEMFAYPSGKLHAGHLRNYTIGDAIARYKKMKGFNVLHTFGWDSFGLPAEN 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA + G +  ++  QN  N +    ++ +SY  D  + T +K ++   +  + ++  KG 
Sbjct: 90  AAIDNGASPAIWTAQNIGNMKRQLKLMGLSYDWDRELATYKKEYYKFNQKFFIEMYKKGL 149

Query: 119 IYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +YK   Y  W    +    N+    +  DG+ +      V   E   ++F+++ Y ++LL
Sbjct: 150 VYKRKSYVNWCPDCNTVLANE----QVEDGKCWRHGKTSVIQKELSQWYFKITDYAEELL 205

Query: 178 SYYES----HPEFILPIER 192
           + +E      PE +L +++
Sbjct: 206 TGHEELKGYWPEQVLAMQK 224



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 13/183 (7%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA-DL 354
           ++ K EK+SKS  N +DP ++I+E G DA R F +      K+  ++ +G+   V A   
Sbjct: 609 LVSKLEKMSKSKNNGVDPEKIIQEFGADAARIFTLFAAPPEKELEWNANGV---VGAYRF 665

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
            N I  +V   + ++++DY  +       ++ DE++     + ++ + ++M++    + A
Sbjct: 666 INRIYLMVQECLDILIEDYSEI--DLSKRSKEDENLQRKTHQTIKRVTDSMEDNFHFNTA 723

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A  + L++E+  Y    K   L   N    S  ++   E +  L +++  F P LA +I
Sbjct: 724 IAGSMELINELTTY----KQNVLDVNNKSSESNKVF--KESMISLILMMSPFAPHLAEEI 777

Query: 474 FDI 476
           + +
Sbjct: 778 WQL 780


>gi|269798025|ref|YP_003311925.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094654|gb|ACZ24645.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 822

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y D+LL+
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLT 204



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 28/203 (13%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ AN P  + + + G +L +G K+SKS GNV+ P E+I   G D  R F++      +D
Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +   G++         G    + R V  I+  Y  +      G  T+ + ++     R
Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIVDTYNEEAKKNVTGELTKDEFALRRELHR 668

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454
           V++++ E++ N    + A++ ++ LV+ +  Y              D+A T+   +  E+
Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAMYAY-------------KDKAETINSALANEL 715

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            R L +LL  FVP +  +++  L
Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738


>gi|310657932|ref|YP_003935653.1| valyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824710|emb|CBH20748.1| valyl-tRNA synthetase [Clostridium sticklandii]
          Length = 884

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 25/265 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+         KF+P  + V G DI+ F  I     + SA   L
Sbjct: 449 VLDTWFSSALWPFSTLGWPQQT-AEMLKFYPTSVLVTGYDIIFFWVI---RMVFSALYVL 504

Query: 287 PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GF 340
            +  FSH FI       +G K+SKSLGN IDP+E+I+  G DALR+ L    + G D  F
Sbjct: 505 DEVPFSHVFIHGLVRDSEGRKMSKSLGNGIDPLEIIDTYGADALRFTLATGNSPGNDMRF 564

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD----GMIPTPGAFTESDESILSVC 394
           Y      +RV A  + AN I N  SR + M L++             A   SD+ I+S  
Sbjct: 565 Y-----MERVEASRNFANKIWN-ASRFIFMNLENSQKKEFKREDVNEALELSDKWIISRV 618

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + + +E+ ENM    +  A+++V     SE  D Y +  K   L   +     + +Y   
Sbjct: 619 NSLSKEMTENMDKFELGIAVSKVYDFAWSEFCDWYIELVKQ-RLYSEDSISKDSAVYTLT 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+ ++  LL  F+P +  +I+  +
Sbjct: 678 YVLEKILKLLHPFMPFITEEIWSYM 702


>gi|257417098|ref|ZP_05594092.1| valyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158926|gb|EEU88886.1| valyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 880

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ D       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|302874832|ref|YP_003843465.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690548|ref|ZP_07632994.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577689|gb|ADL51701.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 880

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 30/263 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  +  +  ++P D+ V G DI+ F    W A ++ + +  
Sbjct: 451 VLDTWFSSALWPFSTLGWPDKTEDLEY-YYPTDVLVTGYDIIFF----WVARMIFSGIHN 505

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +   H  ++H       G K+SKSLGN +DP+EVI+  G DALR+ L+   + G D  
Sbjct: 506 MDETPFHTVLIHGLVRAEDGRKMSKSLGNGVDPLEVIDTYGADALRFMLITGNSPGNDIR 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +  D ++   N   AN I N  SR V M L  D          ++ +D+ ILS  + +++
Sbjct: 566 FKMDKVESARN--FANKIWN-ASRFVMMNLDMDLVNKYKDSTKYSVADKWILSRFNTLVK 622

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVI 455
           E+ EN+    +  A  ++   +     D Y +  KP  W    +  + A  V+Y    V+
Sbjct: 623 EVTENIDKYELGIAGQKIYDFMWTEFCDWYIELTKPVLW----SEDEEAKGVVY---NVL 675

Query: 456 RQLAI----LLQAFVPKLANKIF 474
           R++ I    LL   +P +  +I+
Sbjct: 676 RKVLIGGLQLLHPIMPYITEEIY 698


>gi|227544234|ref|ZP_03974283.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908230|ref|ZP_07125696.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185787|gb|EEI65858.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894657|gb|EFK88013.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 907

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 14/197 (7%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P +  V G DI+ F
Sbjct: 458 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLVTGYDIIFF 517

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VI++ GVDALR+
Sbjct: 518 WVSRMIFQSLEFTGQAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 576

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+     G+D  +    +    N    N I N  SR V M L +    ++P    +  +
Sbjct: 577 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPVLPDKSKWDLA 633

Query: 387 DESILSVCSRVLQEIRE 403
           D  ILS  +  ++++ E
Sbjct: 634 DRWILSRLNATVKQVNE 650



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 64  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 123

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++        FV Q      + AD+         + + YD    T ++  +   R +
Sbjct: 124 KQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDHERFTLDEGLNKAVRKV 183

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 184 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 229


>gi|126656563|ref|ZP_01727824.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622249|gb|EAZ92956.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 907

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 30/290 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  ++K +   I++  DP  ++  W  +     +T G+ +N +     ++P    V G D
Sbjct: 447 LEKAKKEYGNDIQLEQDPD-VLDTWFSSGLWPFSTLGWPENTEDLNT-YYPTSTLVTGFD 504

Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    +   A   +  +P  K V+ HG +    G+K+SKS  N IDP+ +IE+ G D
Sbjct: 505 IIFFWVARMTMMAGYFTDQMPF-KDVYIHGLVRDENGKKMSKSANNGIDPLILIEKYGTD 563

Query: 324 ALRYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMI 377
           ALRY L+RE+A  G+D    +  K    + V A  + AN + N  +R V M LK   G  
Sbjct: 564 ALRYTLIREVAGAGQDISLQYDRKTDQSESVEASRNFANKLWN-AARFVMMHLK---GET 619

Query: 378 PTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429
           P      E      SD+ ILS   + +Q+ RE+++   +  A   +   +     D Y +
Sbjct: 620 PQSLGTPEIDKLELSDKWILSRFHQTVQQTREDIEAYGLGEAAKGLYEFIWGDFCDWYIE 679

Query: 430 AQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K   WE   +      T+ YV    ++    LL  F+P +  +I+  L
Sbjct: 680 LVKTRLWEETPSRDVARQTLAYVLDGTLK----LLHPFMPHITEEIWQTL 725


>gi|148543739|ref|YP_001271109.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153145|ref|YP_001841486.1| valyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363281|ref|ZP_03847413.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682111|ref|ZP_08161629.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530773|gb|ABQ82772.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224489|dbj|BAG25006.1| valyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071737|gb|EEI10028.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978755|gb|EGC15704.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 884

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 14/197 (7%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P +  V G DI+ F
Sbjct: 435 GMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLVTGYDIIFF 494

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  K V  HG I   +G K+SKSLGN IDP++VI++ GVDALR+
Sbjct: 495 WVSRMIFQSLEFTGRAPF-KNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIKKYGVDALRW 553

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+     G+D  +    +    N    N I N  SR V M L +    ++P    +  +
Sbjct: 554 FLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLGEMPAPVLPDKSKWDLA 610

Query: 387 DESILSVCSRVLQEIRE 403
           D  ILS  +  ++++ E
Sbjct: 611 DRWILSRLNATVKQVNE 627



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+    +
Sbjct: 41  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAKVEARLR 100

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHHDTCRIL 109
             G++        FV Q      + AD+         + + YD    T ++  +   R +
Sbjct: 101 KQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLNKAVRKV 160

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 161 FVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 206


>gi|221638390|ref|YP_002524652.1| valyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783556|sp|B9KMT9|SYV_RHOSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|221159171|gb|ACM00151.1| Valyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 987

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 30/167 (17%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239
           ++ +  R E I  +   L D +L+           +DP +++Y VW D        ++ L
Sbjct: 519 VIEVASRAEAIDRLAQALADYNLN-----------EDPTHLVYPVWRDPDVLDTWFSSGL 567

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292
              G L  P+ +   A+++P ++ + G DI+     +W A ++   L +      K V+ 
Sbjct: 568 WPIGTLGWPEETPELARYFPTNVLITGFDII----FFWVARMMMMQLAVVNEVPFKTVYV 623

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           H  +   KG+K+SKSLGNV+DP+E+I+E G DA+R+ L    A G+D
Sbjct: 624 HALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMGRD 670



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+HR+ G D L+  G D           +AG+ T++ V++
Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 95


>gi|147678155|ref|YP_001212370.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274252|dbj|BAF60001.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 932

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 7/106 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T+++   G LD P       WPADL++ G D  R  F++    +  ++   
Sbjct: 528 IMDVWFDSGTSHM---GVLDEPSIWPDLRWPADLYLEGSDQHRGWFNSSLSTSVAVTGQA 584

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + V +HGF++  +G K+SKSLGNVIDP +VI+++G D LR ++
Sbjct: 585 PY-RMVLTHGFVVDEQGRKMSKSLGNVIDPAKVIKQMGADILRLWV 629



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 21/161 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+G A   I+ D++ +FH +DG D  +  G D HG  I + 
Sbjct: 48  KGRPKFILHDGPPYANGHIHLGTALNKILKDIIVKFHSMDGYDAPYVPGWDTHGLPIEQQ 107

Query: 62  AQNA-GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHD 104
           A  A G+      D +   FR       + + D  R   KR                H++
Sbjct: 108 AIKAFGLNRH---DIHPVEFRRKCKEFALKFVDIQREEFKRLGVRGQWDKPYLTLMPHYE 164

Query: 105 TCRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             +I ++ +++ KG IYKG    ++    E    + EV  G
Sbjct: 165 ARQIGVFGEMARKGYIYKGLKPVYWCAACETALAEAEVEYG 205


>gi|302551406|ref|ZP_07303748.1| valyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302469024|gb|EFL32117.1| valyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 880

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 456 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 514

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +
Sbjct: 515 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     DG +P P   + +D  ILS  + V+ E+
Sbjct: 575 DWVQGSRN--FANKIWN-ATRFAMMNGATVDGPLPDPSKMSATDRWILSRLNTVVAEV 629


>gi|270290996|ref|ZP_06197219.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280392|gb|EFA26227.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 887

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     TT G+ D       +++P    V G DI+ F    W A ++  
Sbjct: 450 DPD-VLDTWFSSALWPFTTMGWPDENAADFKRYFPTSTLVTGYDIIFF----WVARMIFQ 504

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL      G
Sbjct: 505 SLKFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAG 564

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    +    N    N I N  SR V M L   D   +P       +D  ILS  +
Sbjct: 565 QDLRFSYTKMDAAWN--FINKIWN-ASRYVIMNLDQVDKPQLPALNELNLADRWILSRLN 621

Query: 396 RVLQEI 401
             ++++
Sbjct: 622 HTVEQV 627


>gi|304385268|ref|ZP_07367613.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328475|gb|EFL95696.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 887

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     TT G+ D       +++P    V G DI+ F    W A ++  
Sbjct: 450 DPD-VLDTWFSSALWPFTTMGWPDENAADFKRYFPTSTLVTGYDIIFF----WVARMIFQ 504

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL      G
Sbjct: 505 SLKFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSTAG 564

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCS 395
           +D  +    +    N    N I N  SR V M L   D   +P       +D  ILS  +
Sbjct: 565 QDLRFSYTKMDAAWN--FINKIWN-ASRYVIMNLDQVDKPQLPALNELNLADRWILSRLN 621

Query: 396 RVLQEI 401
             ++++
Sbjct: 622 HTVEQV 627


>gi|329573413|gb|EGG55023.1| valine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 829

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 120/276 (43%), Gaps = 29/276 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 380 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 439

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        + V  HG I   +G K+SKSLGN IDP++VIE+ G DA
Sbjct: 440 ----WVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADA 495

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   
Sbjct: 496 LRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFS 549

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L  
Sbjct: 550 GEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYG 608

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            N     T   + V  + Q+  LL   +P +  +I+
Sbjct: 609 DNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIW 644



 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71
           H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +     G++      + 
Sbjct: 4   HLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLAQQGISRYDLGREK 63

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FVDQ               +  M   LD S + F  T ++   +  R ++  + +K  IY
Sbjct: 64  FVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVRKVFVSLYEKDLIY 121

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 122 RGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 156


>gi|257088072|ref|ZP_05582433.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256996102|gb|EEU83404.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315028135|gb|EFT40067.1| valyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 880

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|294791905|ref|ZP_06757053.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457135|gb|EFG25497.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 822

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y D+LL+
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLA 204



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 28/203 (13%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ AN P  + + + G +L +G K+SKS GNV+ P E+I   G D  R F++      +D
Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +   G++         G    + R V  I+  Y  +      G  T+ +  +     R
Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIIDAYNEEAKKNVTGELTKDEFGLRRELHR 668

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454
           V++++ E++ N    + A++ ++ LV+ +               + D+A T+   +  E+
Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAM-------------YAHKDKAETINSALANEL 715

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            R L +LL  FVP +  +++  L
Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738


>gi|256962803|ref|ZP_05566974.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272656|ref|ZP_07553904.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256953299|gb|EEU69931.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510651|gb|EFM79673.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 880

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|167947058|ref|ZP_02534132.1| Methionyl-tRNA synthetase, class Ia [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 367

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/353 (19%), Positives = 132/353 (37%), Gaps = 32/353 (9%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           N   HIGH  E I  D+ ARF ++ G    +    D HG  I   A+  G+  +  + + 
Sbjct: 2   NGPIHIGHLVEYIQTDIWARFQKMRGHQCHYVCADDAHGTPIMLRARQEGIEPEALIARV 61

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136
           S   +       I +D++  T  + + +  + ++++  D G I K   +  Y   +  + 
Sbjct: 62  SEEHQADFAAFRIGFDNYHSTHSEENRELSKTIYERNRDAGHIAKRMITQAYDPVETMFL 121

Query: 137 NDDEVYK-----GADGQY------YNAQHNPVQW--------------MEEEGYFFRLSA 171
            D  +       GA+ QY        A ++P +                E + YFF+L+ 
Sbjct: 122 PDRFIKGTCPKCGAEDQYGDNCEICGASYSPAELKDPVSAVSGAKPEERESDHYFFKLAN 181

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           ++  L  ++   P      ++   V+    +G+  L   R    +    P    ++    
Sbjct: 182 FEAMLKQWHPCRPPAAGDGQQARRVVRVWPAGVGHLP-RRPLLRFRDPRPSRQVFLCLCS 240

Query: 232 IDALTNYLTTTGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
                 +L +   ++ P G ++         P  +    +      A             
Sbjct: 241 THQSATWLASRTSVNAPRGWRSTTTGRPTPTPRSITSSARTSSTSTACSGRQCWRGPGFR 300

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            P  VF+HGF+   G+K+SKS G  I     ++ +  + LRY+   ++  G D
Sbjct: 301 KPTAVFAHGFLTVDGQKMSKSRGTFIKARTYLDHLNPEYLRYYFAAKLGAGVD 353


>gi|150021444|ref|YP_001306798.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793965|gb|ABR31413.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 866

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 26/267 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K   +F+P D+ V G DI+ F    W A ++    
Sbjct: 449 VLDTWFSSALWPFSTLGW---PNETKDLKEFYPTDVLVTGFDIIFF----WVARMIMMGY 501

Query: 285 P-LPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             + +K FS    H  +  K G K+SKSLGN IDPIEVIEE G D +R+ L    A G+D
Sbjct: 502 EFMDEKPFSDVYIHQLVRDKFGRKMSKSLGNGIDPIEVIEEYGADPMRFSLSTLAAQGRD 561

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
              D   ++   +   AN I N  +R V + L+D+            SD+ ILS   + +
Sbjct: 562 IKLDLKHIE--TSKKFANKIWN-ATRFVILNLEDFQKQ--DLDNLNLSDKWILSRLQKTI 616

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + +   ++N   + A  ++ +   +   D Y +  KP    +   +  S V  V V V+ 
Sbjct: 617 KNVTHAIENYEFNVAAKEIYNFFWDELCDWYIEISKP----RLKTNERSLVQNVLVYVLD 672

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
               LL   +P +  +++  L  + E+
Sbjct: 673 NSLKLLHPIMPFITEELWQKLPTSGES 699



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA  + + D+L R+ R++G   L+  G D  G
Sbjct: 40 SIVIPPPNITGKIHMGHALNITLQDILTRYKRMNGFKTLWLPGEDHAG 87


>gi|152976875|ref|YP_001376392.1| valyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025627|gb|ABS23397.1| valyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 881

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 150/347 (43%), Gaps = 44/347 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K ++  +   E +  +  R  N  + ++++ + D  +SR+ + WG +IP 
Sbjct: 364 WFVKMGPLAEKAVALQQKEEEKVTFVPERFENTYLRWMEN-IHDWCISRQLW-WGHRIPA 421

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                 +    ++  W  +     +T G+ +       +++  D
Sbjct: 422 WYHKETGEVYVGTEAPADIENWEQDNDVLDTWFSSALWPFSTLGWPNEDAKDFKRYYSTD 481

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + +     +   P  K V  HG +   +G K+SKSLGN IDP++V
Sbjct: 482 ALVTGYDIIFFWVSRMIFQGLEFTGERPF-KDVLIHGLVRDEQGRKMSKSLGNGIDPMDV 540

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YD 374
           I++ G DA+R+FL    A G+D  +  + ++   N    N I N  SR V M + D  Y+
Sbjct: 541 IDKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYE 597

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
             I   G  + +D+ IL+  +  ++ +  NM       A   + + + +   D Y +  K
Sbjct: 598 D-IDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAK 656

Query: 433 PWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              L     D A+  T   V   V+ Q   LL  F+P +  KI+  L
Sbjct: 657 ---LPLYGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFVTEKIWQHL 700



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G     K+    +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEAKLR 102

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++                 + +     + +  +   LD S + F  T ++   D  +
Sbjct: 103 EEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERF--TLDEGLSDAVK 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 161 KVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKDVQGAFYHMNY 208


>gi|126461470|ref|YP_001042584.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166225527|sp|A3PHJ6|SYV_RHOS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|126103134|gb|ABN75812.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 987

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 30/167 (17%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239
           ++ +  R E I  +   L D +L+           +DP +++Y VW D        ++ L
Sbjct: 519 VVEVASRAEAIDRLAQALADYNLN-----------EDPTHLVYPVWRDPDVLDTWFSSGL 567

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292
              G L  P+ +   A+++P ++ + G DI+     +W A ++   L +      K V+ 
Sbjct: 568 WPIGTLGWPEETPELARYFPTNVLITGFDII----FFWVARMMMMQLAVVNEVPFKTVYV 623

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           H  +   KG+K+SKSLGNV+DP+E+I+E G DA+R+ L    A G+D
Sbjct: 624 HALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMGRD 670



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+HR+ G D L+  G D           +AG+ T++ V++
Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 95


>gi|294793765|ref|ZP_06758902.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455335|gb|EFG23707.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 822

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y D+LL+
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGVCWRCD-NPVEKKDLSQWFLRITEYADRLLT 204



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 28/203 (13%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ AN P  + + + G +L +G K+SKS GNV+ P E+I   G D  R F++      +D
Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +   G++         G    + R V  I+  Y  +      G  T+ +  +     R
Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIIDAYNEEAKKNVTGELTKDEFGLRRELHR 668

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454
           V++++ E++ N    + A++ ++ LV+ +               + D+A T+   +  E+
Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAM-------------YAHKDKAETINSALANEL 715

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            R L +LL  FVP +  +++  L
Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738


>gi|295425100|ref|ZP_06817805.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065159|gb|EFG56062.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 890

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 41/269 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K+L   ++  +     ER    +      + D  +SR+ + WG +IP   
Sbjct: 371 WFVKMKPLAEKVLENQKTEGKVNFVPERFEHTLEQWMGDVHDWCISRQLW-WGHRIPAWY 429

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P + 
Sbjct: 430 NKKTGETYVGEEAPKDIENWDQDPD-VLDTWFSSALWPFSTLGWPDTNADDFKRYFPTNA 488

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPI 314
            V G DI+ F    W + ++  +L        K V  HG +   +G K+SKSLGN +DP+
Sbjct: 489 LVTGYDIIFF----WVSRMIFQSLHFTHERPFKDVVLHGLMRDPQGRKMSKSLGNGVDPM 544

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372
           +V+ + G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L    
Sbjct: 545 DVVNKYGCDALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNLPADA 601

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +P    F  +D  I    + V+ E+
Sbjct: 602 KPAHMPDTSKFDLADSWIFDRLNHVVGEV 630



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 29/170 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  I D L RF R+ G D L+  G D  G  IA  A+    
Sbjct: 50  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAG--IATQAKVEAR 107

Query: 68  TTKVFVDQNS----------------------RNFRDMADVLDISYDDFIRTTEKRHHDT 105
             +  +D++                         +  M   LD S + F  T +K     
Sbjct: 108 LREQGIDRHQLGREKFLKQVWEWKDEYANIIKGQWAKMGLSLDYSRERF--TLDKGLSKA 165

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            R ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 166 VRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDDKGDFYHIKY 215


>gi|255554032|ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223542652|gb|EEF44189.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 678

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      A
Sbjct: 24  KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKA 83

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
                + K   D+     R++    +IS+D+F RT+  +  + C+ ++KK+
Sbjct: 84  MEENCSPKEICDKYHAIHREVYKWFNISFDEFGRTSTPQQTEVCQAIFKKL 134



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 9/219 (4%)

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFL 329
           + +P+ LL    N  L K +    ++ ++  K SKS G  V         + V+  RY+L
Sbjct: 200 VMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPVEVWRYYL 259

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIP-TPGAFT 384
           +       D  +    L+ ++N +L N +GN ++R +S I K     Y  ++P  P A +
Sbjct: 260 LTNRPEVSDTLFTWSDLQAKLNNELLNNLGNFINRVLSFIAKPPGTGYGSIVPDAPNADS 319

Query: 385 ESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
                 L+    ++L +  E M+   + + L   +S+ SE + Y    + W+L K +   
Sbjct: 320 HPRTKKLAEDVGKLLGQYVEAMEKVKLKQGLKTAMSISSEGNAYLQECQFWKLYKEDQPS 379

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            + V+  +V ++  LA LL+ F+P  + ++F  L ++ E
Sbjct: 380 CNIVMRASVGLVYLLACLLEPFMPSFSLEVFKQLNLSPE 418


>gi|329768992|ref|ZP_08260415.1| valyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328835799|gb|EGF85522.1| valyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 879

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 14/181 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W A ++   L  
Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 +    HG +   +G K+SKSLGN +DP+EVIEE G D+LRYFL      G+D  
Sbjct: 502 TGVRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEEYGADSLRYFLATNSTPGQDLR 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N  SR V M L+ ++   I   G  T +D+ IL+  ++ ++
Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLSGEKTLADKYILTKLAKTIE 618

Query: 400 E 400
           +
Sbjct: 619 D 619



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          +  I  PN   + HIGHA++  + D+L R+ RL G DVL+  G D           +AG+
Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
          +T+  V+   R
Sbjct: 88 STQAKVEAKMR 98


>gi|282850252|ref|ZP_06259631.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579745|gb|EFB85149.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 822

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y D+LL+
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NPVEKKDLSQWFLRITEYADRLLA 204



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ AN P  + + + G +L +G K+SKS GNV+ P E+I   G D  R F++      +D
Sbjct: 560 LIDANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618

Query: 339 GFYDKDGLK 347
             +   G++
Sbjct: 619 LDWSDQGVE 627


>gi|256960312|ref|ZP_05564483.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293388509|ref|ZP_06633013.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|312905725|ref|ZP_07764747.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909080|ref|ZP_07767940.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256950808|gb|EEU67440.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291082113|gb|EFE19076.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|310628204|gb|EFQ11487.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290642|gb|EFQ69198.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 880

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ D       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|222479318|ref|YP_002565555.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452220|gb|ACM56485.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 1050

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 26/266 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL--SANL 284
           +  VW+D+      T GY  + + +  + WPAD  V   D  R    +W    +  +A  
Sbjct: 527 VFDVWLDSSVASWGTLGYPSD-ETAHDELWPADFIVEAHDQTR--GWFWSQLGMGTAAVG 583

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P ++V  HGF     G K+SKS+GN++ P E IE  G D LR +L+     G D  ++
Sbjct: 584 EIPYEEVLMHGFANDENGRKMSKSVGNIVTPEEAIERAGRDPLRTYLLSHDQQGVDLAFE 643

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTP-----GAFTESDESILSVCS 395
            DGL +        G  N++       L+  D DG  P       G     DE +LS   
Sbjct: 644 WDGLGE------LQGKLNILWNVFRFPLEYMDLDGYDPAEADLDDGELELVDEWVLSRLQ 697

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVT 451
            V  E+ E   +  +  A+  VI  V++ V R++      + WE   +   R +     T
Sbjct: 698 SVETEVTEAWADYRVSDAVNAVIEFVTQDVSRFYVKAVRDRMWEEADSASKRGAYATLAT 757

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              + +   LL    P +  +++  L
Sbjct: 758 --ALDETTRLLAPIAPYMTERMYQTL 781


>gi|223984583|ref|ZP_03634710.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
 gi|223963430|gb|EEF67815.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
          Length = 889

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 43/365 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE---FILPIERRNEVISFVKSGLKDLSLSRKT 213
           V+ M  + +F R+    + +L + E   E   F  P  R  +  +     ++D  +SR+ 
Sbjct: 371 VEPMLSKQWFVRMKPLAEDVLKHQELAEEKINFYPP--RFEKTFTQWLENIEDWCISRQL 428

Query: 214 FDWGIKIP--------------DDPQY---------IMYVWIDALTNYLTTTGYLD-NPD 249
           + WG +IP              + PQ          ++  W  +     +T G+ D  PD
Sbjct: 429 W-WGHRIPAWYHKETGEIYVGTEAPQDLENWNQDEDVLDTWFSSALWPFSTLGWPDKTPD 487

Query: 250 GSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKS 306
             +  ++P D+ V G DI+ F    + + A   + + P  K V  HG I   +G K+SKS
Sbjct: 488 LER--YYPNDVLVTGYDIIFFWVARMAFQARYFTKSRPF-KDVLIHGLIRDAQGRKMSKS 544

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP++VI + GVD+LR+FL      G+D  Y ++ L+   N    N I N  SR V
Sbjct: 545 LGNGVDPMDVIAKHGVDSLRFFLTTNSTPGQDMRYIEEKLEASWN--FINKIWN-ASRFV 601

Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M + +D+          + +D  IL+  +  +  +  NM          ++ S + +  
Sbjct: 602 MMNMPEDFTLEDIDLSTLSITDTWILNRLNETIASVTANMDKYEFALVGNELYSFIWDDF 661

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Y +  K   L   +           +  +R +  LL  F+P +  +I+ +L   ++ 
Sbjct: 662 CSWYIELSKA-GLNSEDAQVKRATQSTLIVCLRAIIRLLHPFMPFVTEEIYSVLPHTEKA 720

Query: 484 RCFQS 488
            C  +
Sbjct: 721 CCLAA 725



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 22/133 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  + D++AR+ R+ G D+L+  G D           +AG+ T+  VD+  +  
Sbjct: 71  HLGHAWDTTLQDIIARYKRMQGYDMLWVPGMD-----------HAGIATQAKVDERLK-- 117

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA--- 134
           ++     D+  + F+      ++ +    R  W K+    D  +  ++    L       
Sbjct: 118 KEGVSRYDLGREKFLERAWDWKEEYAGHIRQQWAKMGLSLDYTRERFTLDEGLSKAVAKV 177

Query: 135 ---YYNDDEVYKG 144
              YYND  +Y+G
Sbjct: 178 FVDYYNDGLIYQG 190


>gi|77462536|ref|YP_352040.1| valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|90108434|sp|Q3J4Z5|SYV_RHOS4 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77386954|gb|ABA78139.1| Putative valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 987

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 30/167 (17%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239
           ++ +  R E I  +   L D +L+           +DP +++Y VW D        ++ L
Sbjct: 519 VVEVASRAEAIDRLAQALADYNLN-----------EDPTHLVYPVWRDPDVLDTWFSSGL 567

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292
              G L  P+ +   A+++P ++ + G DI+     +W A ++   L +      K V+ 
Sbjct: 568 WPIGTLGWPEETPELARYFPTNVLITGFDII----FFWVARMMMMQLAVVNEVPFKTVYV 623

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           H  +   KG+K+SKSLGNV+DP+E+I+E G DA+R+ L    A G+D
Sbjct: 624 HALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMGRD 670



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+HR+ G D L+  G D           +AG+ T++ V++
Sbjct: 52 HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 95


>gi|18977468|ref|NP_578825.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18266873|sp|P46214|SYI_PYRFU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18893167|gb|AAL81220.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 1066

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 128/254 (50%), Gaps = 14/254 (5%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLPLPK 288
           VW D+      + GY  N +  + K WPAD  V G+D + ++      A +++ +    +
Sbjct: 552 VWFDSGIASWASLGYPRNKELFE-KLWPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYR 610

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V  HG++L  KG+K+SKSLGN+I P EV+E+ G D  R++++      ++  +   G++
Sbjct: 611 AVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVE 670

Query: 348 KRVNADLANGIGNLVSRSVS-MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIREN 404
           +     + N + N+   S + M L ++D   +      F E D+ ILS  + +++E+   
Sbjct: 671 Q--VRRMLNILWNVYVLSATYMSLDNFDPRNVKVEELEFREEDKWILSRVNNLIKEVENG 728

Query: 405 MQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++   + +A   + + V E + R++     ++ W ++  +PD+ +   Y   +V   L  
Sbjct: 729 IETFYLTKATRALYNFVVEDLSRWYVRLIRKRLW-VEGDDPDKLAA-YYTLWKVFDVLLR 786

Query: 461 LLQAFVPKLANKIF 474
           L+  F P +  +I+
Sbjct: 787 LMAPFTPYITEEIY 800



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 13/105 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVKVEQA 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
            G+ TK  +++             I  ++FI+  ++   +  RI+
Sbjct: 101 LGLKTKKEIEEK------------IGVENFIQKCKEFALNNLRIM 133


>gi|293382180|ref|ZP_06628123.1| valine--tRNA ligase [Enterococcus faecalis R712]
 gi|291080463|gb|EFE17827.1| valine--tRNA ligase [Enterococcus faecalis R712]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAIENQETEDAVEFYPP--RFNQTFLRWMENIHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ D       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIAFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDSSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|282896678|ref|ZP_06304686.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Raphidiopsis
           brookii D9]
 gi|281198396|gb|EFA73284.1| Valyl-tRNA synthetase  (Valine--tRNA ligase) (ValRS) [Raphidiopsis
           brookii D9]
          Length = 1045

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 156/379 (41%), Gaps = 65/379 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           PV+ +    +F ++    DK L +   E+ PEF+   +R  +V       L+D  +SR+ 
Sbjct: 370 PVEPLLSTQWFVKIRPLADKTLEFLDQENSPEFV--PQRWGKVYRDWLVNLRDWCISRQL 427

Query: 214 FDWGIKIP--------------DDPQYIMYVWIDALTNYLTTTG----YLDNPD------ 249
           + WG +IP                P ++ +   +AL    +  G     + +PD      
Sbjct: 428 W-WGHQIPAWYAVSETGGEITDSTPYFVAHNETEALEKARSQWGENVQLIQDPDVLDTWF 486

Query: 250 ----------GSKAK------FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLP 287
                     G   K      ++P    V G DI+ F    W A +       +  +P  
Sbjct: 487 SSGLWPFSTLGWPEKTPDFDAYYPTTTLVTGFDIIFF----WVARMTMMAGHFTGKMPF- 541

Query: 288 KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDG 345
           + V+ HG +  +  +K+SKS  N IDP+ +I++ G DALRY LV+E +  G+D   + D 
Sbjct: 542 QTVYIHGLVRDENKQKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDR 601

Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQE 400
            K + V+ + +    N +  +   ++ + DG  P     P     SD  ILS   +V+++
Sbjct: 602 KKDESVSVEASRNFANKLWNAARFVMMNLDGQTPEQLGEPQGIELSDRWILSRYHQVVKQ 661

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
               + N  +  A   +   +     D Y +  K       +P    T   +   ++  +
Sbjct: 662 TNNYIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQNNADPVSRKTAQQILASILSGV 721

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  F+P +  +I+  L
Sbjct: 722 LKLLHPFMPHITEEIWQTL 740



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
           H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 71  HMGHAFESALIDALVRYHRMKGRNTLWLPGTD 102


>gi|295114302|emb|CBL32939.1| valyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIEFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|228475237|ref|ZP_04059963.1| valine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270848|gb|EEK12250.1| valine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 876

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P ++ V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPNEEAKDYQRYYPTNVLVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V  HG +    G K+SKSLGN +DP++VIE+ G D+LRYFL    + G D  
Sbjct: 499 TGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  ++
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIE 616

Query: 400 EI---RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +    E  +   + RAL   I      D Y +  K   +   +  +  T   V    + 
Sbjct: 617 TVTNLSEKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEAQKQTTRSVLSYTLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  +L  F+P +  KI+  L
Sbjct: 675 QIMRMLHPFMPFVTEKIWQSL 695



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 13/67 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMD-----------HAGI 86

Query: 68 TTKVFVD 74
           T+  VD
Sbjct: 87 ATQAKVD 93


>gi|221135841|ref|XP_002164854.1| PREDICTED: similar to methionyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 243

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 9/118 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K  ++ A+ Y N   HIGH A   I AD+  R+ R  G DV F +GTDEHG  I   A+
Sbjct: 6   QKYTVTAALIYANGPIHIGHLAGCYIPADIYVRYLRSKGADVAFISGTDEHGVPITVKAR 65

Query: 64  NAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
             G T +  VD    Q  ++F D      IS+D + RT+ + HH   + ++  + DKG
Sbjct: 66  KEGKTPQQVVDFYYEQIKQSFADFG----ISFDIYSRTSNQSHHKVSQEIFTTLYDKG 119


>gi|255974415|ref|ZP_05425001.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|307281862|ref|ZP_07562078.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|255967287|gb|EET97909.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|306503893|gb|EFM73114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGENE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|196229356|ref|ZP_03128221.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196226588|gb|EDY21093.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 893

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 40/316 (12%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------DDPQY--------IMYV 230
           ER  +V      G++D  +SR+ + WG +IP              P+         ++  
Sbjct: 397 ERWAKVYDHWLEGIQDWCISRQLW-WGHRIPVWYRGDEIHCDITAPEGDGWKQDSDVLDT 455

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------NL 284
           W  +      T G+ +  D + AKF+P    V G DI+     +W A ++ A      +L
Sbjct: 456 WFSSWLWPFATMGWPEKTD-TLAKFYPTTDLVTGPDII----FFWVARMIMAGYEWMGDL 510

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V+  G I  K G K+SKSLGN  DP+++I + G DALR+ ++R    G D  +D+
Sbjct: 511 PF-KNVYFTGIIRDKQGRKMSKSLGNSPDPLDLIAKYGADALRFGVMRSAPLGADILFDE 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             ++  +  +    + N  +R   M     +G I  P   T  D  IL+  S  + ++  
Sbjct: 570 KNVE--LGRNFCTKLWN-ATRFRQMQGGASEGEI-RPDLLTSDDRWILARLSDAIGDVST 625

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++       A + +         D Y +A K       +  R +  L V   V+     +
Sbjct: 626 SLDEYRFSDATSTLYRFFWNEFCDWYLEACKAVFFHSGDEARKANTLAVIDFVLAHTLRI 685

Query: 462 LQAFVPKLANKIFDIL 477
              F+P +  +I++ L
Sbjct: 686 FHPFLPFITEEIWNSL 701


>gi|197294279|ref|YP_001798820.1| valyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853606|emb|CAM11477.1| Valyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 856

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 7/129 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +    L+T G+ +       +F PAD+ V G DIL F     +   +FL   +
Sbjct: 438 VLDTWFSSSLWPLSTLGWPNKKSFFNKRF-PADVLVTGYDILTFWVSKMVLQSSFLTQKD 496

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  HG I  ++G+K+SKS GN +DP+++I + GVDALR+FL+   A G D  YD
Sbjct: 497 -PF-KDVLLHGLIRDNEGQKMSKSKGNGVDPLDIINKYGVDALRFFLITSAAPGLDLLYD 554

Query: 343 KDGLKKRVN 351
           +  +K   N
Sbjct: 555 EIKVKNAWN 563



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +  I  PN   + H+GHA+  +I D+L RF ++ G +VLF  G D  G
Sbjct: 36 TVVIPPPNVTGKLHLGHAWNNVIQDILIRFKKMQGFEVLFLPGMDHAG 83


>gi|219856195|ref|YP_002473317.1| hypothetical protein CKR_2852 [Clostridium kluyveri NBRC 12016]
 gi|219569919|dbj|BAH07903.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 898

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 17/188 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N +  K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 467 VLDTWFSSALWPFSTLGWPENTEDLKC-FYPNNTLVTGYDIIFF----WVARMIFSGLYC 521

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + V  HG +   +G K+SKSLGN +DPIEVI E G DALR+ L+   A G D  
Sbjct: 522 MDDIPFENVLIHGIVRDSEGRKMSKSLGNGVDPIEVIGEYGADALRFALITGNAPGNDIR 581

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVL 398
           Y  + ++   N   AN I N  SR V M L D + M        ++++D+ ILS  + + 
Sbjct: 582 YYPERVESARN--FANKIWN-ASRFVLMNL-DENIMDKYKACREYSDADKWILSRLNTLA 637

Query: 399 QEIRENMQ 406
           +E+ +N++
Sbjct: 638 KEVTDNIE 645


>gi|189083231|sp|Q12R39|SYL_SHEDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 863

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AINNKTSPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +     PV   E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCD-TPVIQKEIPQWFIKITDYAEELLND 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I      +KD   S ++FD     PD    + YV I
Sbjct: 206 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFK-VKD---SEQSFDIYTTRPDTLMGVTYVAI 261

Query: 233 DA 234
            A
Sbjct: 262 AA 263


>gi|117923746|ref|YP_864363.1| leucyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|171460773|sp|A0L4R4|SYL_MAGSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117607502|gb|ABK42957.1| leucyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 859

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 10/181 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++E  Y+     YP+ + H+GH     I DV+AR+ R+ G  VL   G D  G     
Sbjct: 30  LGDKETFYLLVMFPYPSGRIHMGHVRNYAIGDVIARYQRMQGKAVLHPMGWDAFGMPAEN 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKG 117
           AA    V  + +  +N    R+    + +SYD   +F    E   H   ++L+ ++ +KG
Sbjct: 90  AAAQRKVHPRDWTYENIATMREELKSMGLSYDWDREFATCDEDYAHAE-QVLFLRLYEKG 148

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            +Y K  +  W  + D     +++V  G  G    A   PV+  E   +FFR++ Y D+L
Sbjct: 149 LVYRKHAFVNWDPV-DHTVLANEQVIDGC-GWRSGA---PVEQRELNQWFFRITHYADEL 203

Query: 177 L 177
           L
Sbjct: 204 L 204


>gi|169350153|ref|ZP_02867091.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
 gi|169292936|gb|EDS75069.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
          Length = 878

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 35/280 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P +  V G DI+ F    W + ++  +L  
Sbjct: 449 VLDTWFSSALWPFSTLGWPNEDSELFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLHF 504

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN +DP++VI+E G D LR+FL    A G D  
Sbjct: 505 TDQRPFENVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFFLTTNSAPGMDLR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSR 396
           Y  + L+   N    N I N    S   +L + D  +     T       D+ IL+  + 
Sbjct: 565 YIPEKLESSWN--FINKIWN----SARFVLMNIDESMKYEDLTFDNLNLCDKWILNRLNE 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW--ELKKTNPDRASTV-----L 448
           V++E+  NM          + +++ +E+ ++ +D    W  EL K + +  + V     L
Sbjct: 619 VIREVDINMDK-------FEFVNVGTELYKFIWDDFCSWYIELTKVHLNSENEVEKQASL 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              V V+  +  +L  F+P +  +IF  +   +E+ C  S
Sbjct: 672 NTLVYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESICIAS 711



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R+ R+ G D L+  G D  G     K+    Q
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMDHAGIATQAKVEARMQ 103

Query: 64  NAGVT 68
             GV+
Sbjct: 104 EEGVS 108


>gi|116878593|ref|YP_357724.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|114843229|gb|ABA89554.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 885

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 52/314 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP                ++  W  + 
Sbjct: 399 IRDWCISRQIW-WGHRIPAWFCAACNEVTVSREDPTACSHCGATELRQETDVLDTWFSSA 457

Query: 236 TNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-K 288
               +T G+   PD + A  KF+P    V G DIL F    W A ++   L     +P K
Sbjct: 458 LWPFSTMGW---PDKTVALEKFYPTSCLVTGFDILFF----WVARMMMMGLKFMGQVPFK 510

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V+ H  +   +G+K+SKS GNVIDP+ VI+E G DA R+ L    A G+D     D + 
Sbjct: 511 DVYIHALVRDAQGQKMSKSKGNVIDPLTVIDEYGTDAFRFTLAAFAAQGRDVKLSVDRIA 570

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              N    N + N  SR   M L+D+D  G+       T ++  IL+    V  E  + +
Sbjct: 571 GYRN--FVNKLWN-ASRFALMNLEDFDPSGIDLDDCQLTLAERWILTRLIDVAAETGKAL 627

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +    + A + + +       D Y +  K  +L   +  R +T   V   V+ QL  LL 
Sbjct: 628 EEYKFNEAASVLYAFTWHEFCDWYIELSKD-DLYGEDAARKATSQAVLYTVLEQLLRLLH 686

Query: 464 AFVPKLANKIFDIL 477
             +P +  +I+  L
Sbjct: 687 PLMPFVTEEIWQAL 700



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + D+LAR+ R+DG +VL+  GTD  G     A QN  V
Sbjct: 40  SIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAG----IATQNV-V 94

Query: 68  TTKVFVDQNSRN 79
             ++  + +SR+
Sbjct: 95  EKQLAAEGSSRH 106


>gi|153955828|ref|YP_001396593.1| valyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146348686|gb|EDK35222.1| ValS [Clostridium kluyveri DSM 555]
          Length = 882

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 17/188 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N +  K  F+P +  V G DI+ F    W A ++ + L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPENTEDLKC-FYPNNTLVTGYDIIFF----WVARMIFSGLYC 505

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + V  HG +   +G K+SKSLGN +DPIEVI E G DALR+ L+   A G D  
Sbjct: 506 MDDIPFENVLIHGIVRDSEGRKMSKSLGNGVDPIEVIGEYGADALRFALITGNAPGNDIR 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVL 398
           Y  + ++   N   AN I N  SR V M L D + M        ++++D+ ILS  + + 
Sbjct: 566 YYPERVESARN--FANKIWN-ASRFVLMNL-DENIMDKYKACREYSDADKWILSRLNTLA 621

Query: 399 QEIRENMQ 406
           +E+ +N++
Sbjct: 622 KEVTDNIE 629


>gi|19705307|ref|NP_602802.1| valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81485170|sp|Q8RHK3|SYV_FUSNN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19713276|gb|AAL94101.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 887

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 22/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P +  V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M LK +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-ATRFVIMNLKGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453
           +++ ++   +  A   V   +     D Y +  K   ++  N D        T  Y+   
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           ++ Q   LL  F+P +  +I+
Sbjct: 683 ILEQGLRLLHPFMPFITEEIW 703


>gi|197121883|ref|YP_002133834.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196171732|gb|ACG72705.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 1051

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 19/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  +  F+P  +   G DI+     +W A ++   L  
Sbjct: 462 VLDTWFSSGLWPFSTMGWPEQTETLRT-FYPTSVMETGHDII----FFWVARMMMMGLHF 516

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +V      LH      KG+K+SK+ GNVIDP+ + ++ G DALR+ L    A G+D  
Sbjct: 517 MGEVPFRTVYLHPMVRDEKGQKMSKTKGNVIDPLVITDQYGADALRFTLAALTAQGRDIK 576

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVL 398
             K+ ++       AN + N  SR   M L  Y   G  P   A T +D  IL+   R +
Sbjct: 577 LAKERIEG--YRAFANKLWN-ASRFALMNLSGYQERGEDPARLARTPADRWILARLQRAV 633

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            E  E ++    + A   V + V     D Y +  K   L   +P+   +V  V V  ++
Sbjct: 634 NETVEALEAFRFNDAANAVYAFVWHELCDWYIELSKE-ALASEDPEARRSVQAVLVHCLQ 692

Query: 457 QLAILLQAFVPKLANKIFDIL 477
               LL  F+P +  +++ +L
Sbjct: 693 TSYRLLHPFMPFITEELWHVL 713



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 13/76 (17%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R +   S  +  PN     H+GHA    + DVL R+ R+ G + L+  GTD        
Sbjct: 44  DRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTD-------- 95

Query: 61  AAQNAGVTTKVFVDQN 76
              +AG+ T++ V++ 
Sbjct: 96  ---HAGIATQMIVEKE 108


>gi|91792159|ref|YP_561810.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91714161|gb|ABE54087.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 872

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 39  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 99  AINNKTSPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGMV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +     PV   E   +F +++ Y ++LL+ 
Sbjct: 159 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCD-TPVIQKEIPQWFIKITDYAEELLND 214

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I      +KD   S ++FD     PD    + YV I
Sbjct: 215 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFK-VKD---SEQSFDIYTTRPDTLMGVTYVAI 270

Query: 233 DA 234
            A
Sbjct: 271 AA 272


>gi|256761215|ref|ZP_05501795.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256682466|gb|EEU22161.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAAYIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|260890419|ref|ZP_05901682.1| valine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860039|gb|EEX74539.1| valine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 881

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 20/294 (6%)

Query: 199 FVKSGLKDLSL-SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           FV   L++  + +R+ F   + + ++   ++  W  +     +T G+ +  +  K KF+P
Sbjct: 425 FVAKSLEEAKIQAREKFGKDVNLTEETD-VLDTWFSSALWPFSTLGWPNETEDLK-KFFP 482

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVI 311
            +  V G DIL F    W A ++  +L +  +     V+ HG I   KG K+SKSLGN  
Sbjct: 483 TNALVTGADILFF----WVARMVMMSLYIKDEIPFNYVYLHGIIRDEKGRKMSKSLGNSP 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+++I + G DA+R+  +   + G+D  + +  L+  + +  AN + N  SR V   L+
Sbjct: 539 DPLDLIAKYGADAIRFSFLYNTSQGQDIHFSEKLLE--MGSAFANKVWN-ASRFVLSNLE 595

Query: 372 DYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYF 428
           D+D       + F   D+ ILS      + I ENM+   +  A  LA         D Y 
Sbjct: 596 DFDVSTTVDNSEFKLEDKWILSKLQTASKLINENMEKYELDAAAKLAYEFFRGDFCDWYV 655

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +  K     +   D+     +V   V+ +   +L  F+P +  +I+  L   +E
Sbjct: 656 EIAKTRVYGQEGSDKV-VAQWVLRHVLDKGLKMLHPFMPFITEEIWQKLQTGEE 708



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 26/182 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   S AI  PN     H+GH     I D + R+ R+ G D L+  G D  G     K+
Sbjct: 35  EKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRYKRMSGFDTLWIPGMDHAGIATQNKV 94

Query: 59  AKAAQNAGVTTKV-----FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102
            +   + G + +      F+ +            ++  R +   LD + + F  T ++  
Sbjct: 95  ERMLADEGTSKEEIGYDEFLRRTWEWKEKHGGLITKQLRKLGVSLDWTRERF--TMDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWME 161
            +  + ++ K+ + G IY+G Y   +   D+    DDEV ++  +G+ +  ++ PV+  +
Sbjct: 153 SEAVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHEDKNGKIWEIRY-PVKDSD 211

Query: 162 EE 163
           EE
Sbjct: 212 EE 213


>gi|303279394|ref|XP_003058990.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460150|gb|EEH57445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1065

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 6/137 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       KF+P  +   G DIL F    +   ++ ++  L
Sbjct: 604 VLDTWFSSGLWPFSTLGWPDEDAADFKKFFPTQVMETGHDILFFWVARMVMMSYGMTNTL 663

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V+ HG +   KG K+SKSLGNV+DP+ VI+E G DALR+ L    A G+D   + 
Sbjct: 664 PF-HTVYLHGLVRDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQDLNLNM 722

Query: 344 DGLKKRVNADLANGIGN 360
           D L    N +  N I N
Sbjct: 723 DRLAS--NRNFTNKIWN 737


>gi|124485013|ref|YP_001029629.1| isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166229749|sp|A2SPV6|SYI_METLZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|124362554|gb|ABN06362.1| Isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 1066

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    I  VW D+      T  + + P+    K+WPAD  + G D  R  F++    
Sbjct: 514 RIPD----IFDVWYDSGIASWATLRFPEKPE-DFGKYWPADFILEGHDQTRGWFYSQLAL 568

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +     P  K V  HGF L  +G+K+SKSLGNVI P +V ++ GVD +R +++   A 
Sbjct: 569 STIAFGKAPY-KSVLMHGFALDAEGKKMSKSLGNVIAPEDVAKQFGVDVMRQYILSANAP 627

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDY-----DGMIPTPGA------- 382
             D  +  +G+K   N  + N + N+    +  M L  Y     DG +  P A       
Sbjct: 628 WDDMRFSLEGVK--TNHRMFNVLWNVYKFPLPYMALDGYKPAAKDG-VWDPSAVEDHISE 684

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-YFDAQKP--W-ELK 437
           F   D  ++S  + + +++ + M+   +HRA   + + +  E+ R Y    +P  W E +
Sbjct: 685 FCREDRWLISRVNSLAEQVTKEMEVCNLHRATRPISTFILDELSRWYVQLVRPRMWLEEE 744

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +  +A   +Y    V+R+L  +   F P +   ++  L
Sbjct: 745 SVSKMQAYDTMYY---VMRRLVTIFAPFAPHITECMYQNL 781


>gi|154276782|ref|XP_001539236.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150414309|gb|EDN09674.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 834

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G+    +  QN  N ++    +   +D   + +  + + +  T RI    +  +G  Y
Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIF-LMLYKEGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           +      Y   D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKARVNYDPIDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDL 238

Query: 178 -SYYESHPEFILPIER 192
            S   S PE +L ++R
Sbjct: 239 ESLEASWPERVLSMQR 254


>gi|288931973|ref|YP_003436033.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894221|gb|ADC65758.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 1023

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 21/256 (8%)

Query: 230 VWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+    + + G L+ P  +    K WPAD    G D  R  F++    + +     P
Sbjct: 514 VWFDS---GVASWGTLEYPLKEEEFKKLWPADFITEGHDQTRGWFYSQLGASIIAFGKAP 570

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K V  HGF L  +G K+SKSLGNV++P EVI+ +GVDA R +++   A  +D  +   
Sbjct: 571 Y-KTVLMHGFTLDEQGRKMSKSLGNVVEPEEVIDRIGVDAFRLYVLSS-ALWEDLKFSWG 628

Query: 345 GLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +  +   L N   N V  + + M L  +  + P        D+ ILS      +   E
Sbjct: 629 EAENFLR--LLNIFWNAVRFAYTYMELDKFREVSPEDCELRIEDKWILSRLESFCKLANE 686

Query: 404 NMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQL 458
            M+N  +HR + +    V E   R++     ++ WE +K +P + +   Y T+  VI ++
Sbjct: 687 AMENYNLHRVVKRFYDFVVEDFSRWYIQLIRRRVWE-EKDSPSKIAA--YATMFRVIDKV 743

Query: 459 AILLQAFVPKLANKIF 474
             ++  F P +A  ++
Sbjct: 744 TRIISPFAPFIAEYVY 759



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFV 73
           Y   + H+G A+  +I D + R+ R+ G  V    G D HG  I  K  Q  G+  K  +
Sbjct: 45  YTTGRIHLGTAWNKVIKDTVLRYKRMKGFKVTDRPGWDMHGLPIEVKVEQELGIKEKKEI 104

Query: 74  DQ 75
           ++
Sbjct: 105 EE 106


>gi|90101539|sp|Q3A253|SYV_PELCD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 899

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 52/314 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP                ++  W  + 
Sbjct: 413 IRDWCISRQIW-WGHRIPAWFCAACNEVTVSREDPTACSHCGATELRQETDVLDTWFSSA 471

Query: 236 TNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-K 288
               +T G+   PD + A  KF+P    V G DIL F    W A ++   L     +P K
Sbjct: 472 LWPFSTMGW---PDKTVALEKFYPTSCLVTGFDILFF----WVARMMMMGLKFMGQVPFK 524

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V+ H  +   +G+K+SKS GNVIDP+ VI+E G DA R+ L    A G+D     D + 
Sbjct: 525 DVYIHALVRDAQGQKMSKSKGNVIDPLTVIDEYGTDAFRFTLAAFAAQGRDVKLSVDRIA 584

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              N    N + N  SR   M L+D+D  G+       T ++  IL+    V  E  + +
Sbjct: 585 GYRN--FVNKLWN-ASRFALMNLEDFDPSGIDLDDCQLTLAERWILTRLIDVAAETGKAL 641

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +    + A + + +       D Y +  K  +L   +  R +T   V   V+ QL  LL 
Sbjct: 642 EEYKFNEAASVLYAFTWHEFCDWYIELSKD-DLYGEDAARKATSQAVLYTVLEQLLRLLH 700

Query: 464 AFVPKLANKIFDIL 477
             +P +  +I+  L
Sbjct: 701 PLMPFVTEEIWQAL 714



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + D+LAR+ R+DG +VL+  GTD  G     A QN  V
Sbjct: 54  SIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAG----IATQNV-V 108

Query: 68  TTKVFVDQNSRN 79
             ++  + +SR+
Sbjct: 109 EKQLAAEGSSRH 120


>gi|22299046|ref|NP_682293.1| valyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81742953|sp|Q8DIS8|SYV_THEEB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22295228|dbj|BAC09055.1| valyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 913

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 30/282 (10%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL---- 279
           Q ++  W  +     +T G+ D+ PD    +++P    V G DI+ F    W A +    
Sbjct: 463 QDVLDTWFSSGLWPFSTLGWPDDTPD--YRRYYPNTTLVTGFDIIFF----WVARMTMMG 516

Query: 280 --LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IAC 335
              +  +P  + V+ HG +     +K+SKS  N IDP+ +IE+ G DALRY LV+E +  
Sbjct: 517 QYFTGKIPF-RDVYIHGLVRDENNKKMSKSANNGIDPLILIEKYGTDALRYSLVKEVVGA 575

Query: 336 GKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGA--FTES 386
           G+D    +  K      V A  A    N +  +   +L + +G  P    TP     T S
Sbjct: 576 GQDIRLAYNRKTDESATVEA--ARNFANKLWNASRFVLLNLEGQTPGQLGTPRRQDLTAS 633

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  ILS     +Q  RE +++  +  A   +   +     D Y +  KP  L+  N    
Sbjct: 634 DRWILSRYHTAIQTTRERIESYGLGEAAKGLYEFIWGDFCDWYIELVKP-RLQGENAKAK 692

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            T   V   V+     LL  F+P +  +I+  L    +N   
Sbjct: 693 RTAQQVLATVLDGTLKLLHPFMPHITEEIWHTLHQVADNEVL 734



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + DVL R+HR+ G +VL+  GTD
Sbjct: 55 HMGHAFEHALIDVLIRYHRMIGRNVLWLPGTD 86


>gi|255308304|ref|ZP_05352475.1| valyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 888

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286
            W  +     +T G+   P+ ++A   ++P  + V G DI+ F  +    A +   N   
Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKD 344
              V  HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ L    + G D  FY + 
Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYME- 569

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             +     + AN + N  SR V M     I+K+           T +D+ I+S  + +++
Sbjct: 570 --RVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVK 625

Query: 400 EIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E   NM    +  AL ++     SE  D Y +  KP  L   + +  S  LY    V+ +
Sbjct: 626 EATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEK 684

Query: 458 LAILLQAFVPKLANKIF 474
           +  LL  ++P +  +I+
Sbjct: 685 ILKLLHPYMPFITEEIY 701


>gi|154686944|ref|YP_001422105.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154352795|gb|ABS74874.1| ValS [Bacillus amyloliquefaciens FZB42]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++  D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFKRYYSTDVLVTGYDIIFF 491

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L        K V  HG I   +G K+SKSLGN +DP++VI++ G D+
Sbjct: 492 ----WVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADS 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LRYFL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   
Sbjct: 548 LRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLS 601

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  + +D+ IL+  +  ++++ +             + + + +   D Y +  K   L  
Sbjct: 602 GEKSVADKWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWYIEMAK---LPL 658

Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D A+  T   V   V+ Q   LL  F+P L  +I+  L
Sbjct: 659 YGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR       F +        Y DFIR                 T ++  + 
Sbjct: 98  EAKLREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLNK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+  KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 158 AVREVFVKLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208


>gi|229547604|ref|ZP_04436329.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548188|ref|ZP_04436913.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|256852478|ref|ZP_05557854.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257091151|ref|ZP_05585512.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902616|ref|ZP_07761821.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229306667|gb|EEN72663.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307294|gb|EEN73281.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256712332|gb|EEU27364.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256999963|gb|EEU86483.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633954|gb|EFQ17237.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315030884|gb|EFT42816.1| valyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315163283|gb|EFU07300.1| valyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578975|gb|EFU91166.1| valyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|257077439|ref|ZP_05571800.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779640|ref|ZP_06745031.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307269913|ref|ZP_07551239.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256985469|gb|EEU72771.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453297|gb|EFG21708.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306513703|gb|EFM82309.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
          Length = 880

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 23/273 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIAF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               T   + V  + Q+  LL   +P +  +I+
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIW 695



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|328957160|ref|YP_004374546.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673484|gb|AEB29530.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 881

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 431 GMEAPEDNENWVQDPDVLDTWFSSALWPFSTMGWPDEDSEDFKRYFPTNTLVTGYDIIFF 490

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I    G K+SKSLGN IDP++VIE+ G DA
Sbjct: 491 ----WVSRMMFQSLEFTGKRPFNNVLIHGLIRDTDGRKMSKSLGNGIDPMDVIEKYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAF 383
           LR+FL    A G+D  +  D +    N    N I N  SR   M ++++    I   G  
Sbjct: 547 LRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-ASRFTLMNMENFTVDQIDLTGEK 603

Query: 384 TESDESILSVCSRVLQEI 401
           T +D  IL+  +  ++++
Sbjct: 604 TVADRWILTKLNETVEKV 621



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 18/117 (15%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ K   S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     
Sbjct: 35  DKTKEAYSVVIPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQGFDTLWLPGMDHAG----- 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS 114
            A  A V  K+  D  SR         D+  + FI T    ++ +    R  W K+ 
Sbjct: 90  IATQAKVEAKLAEDGISR--------YDLGREKFIDTVWDWKEEYASVIREQWAKVG 138


>gi|314936231|ref|ZP_07843578.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654850|gb|EFS18595.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 876

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +        ++P ++ V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPNEEAKDYQHYYPTNVLVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V  HG +    G K+SKSLGN +DP++VIE+ G D+LRYFL    + G D  
Sbjct: 499 TGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEKYGADSLRYFLATGSSPGNDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  ++
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIE 616

Query: 400 EI---RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +    E  +   + RAL   I      D Y +  K   +   +  +  T   V    + 
Sbjct: 617 TVTNLSEKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYTLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  +L  F+P +  KI+  L
Sbjct: 675 QIMRMLHPFMPFVTEKIWQSL 695



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 13/67 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMD-----------HAGI 86

Query: 68 TTKVFVD 74
           T+  VD
Sbjct: 87 ATQAKVD 93


>gi|255102404|ref|ZP_05331381.1| valyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 888

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 19/256 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286
            W  +     +T G+   P+ ++A   ++P  + V G DI+ F  +    A +   N   
Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              V  HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ L    + G D  +  + 
Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYMER 570

Query: 346 LKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++   N   AN + N  SR V M     I+K+           T +D+ I+S  + +++E
Sbjct: 571 VEFARN--FANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVKE 626

Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              NM    +  AL ++     SE  D Y +  KP  L   + +  S  LY    V+ ++
Sbjct: 627 ATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEKI 685

Query: 459 AILLQAFVPKLANKIF 474
             LL  ++P +  +I+
Sbjct: 686 LKLLHPYMPFITEEIY 701


>gi|229543663|ref|ZP_04432723.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328083|gb|EEN93758.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 881

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 32/223 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    D  +    S  +     ER  +        ++D  +SR+ + WG +IP   
Sbjct: 364 WFVKMQPLADAAVKLQASEGKVHFVPERFEKTYLHWMENIRDWCISRQLW-WGHRIPAWY 422

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                 DP  ++  W  +     +T G+ D       +++P D 
Sbjct: 423 HKETGEVYVDTEPPRDIENWEQDPD-VLDTWFSSALWPFSTMGWPDEEAKDYKRYYPTDT 481

Query: 261 HVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
            V G DI+ F    + +     +   P  K V  HG +   +G K+SKSLGN +DP+EVI
Sbjct: 482 LVTGYDIIFFWVSRMIFQGLAFTGKRPF-KDVLIHGLVRDEQGRKMSKSLGNGVDPMEVI 540

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           ++ G D+LRYFL    A G+D  +  + ++   N   AN I N
Sbjct: 541 DKYGADSLRYFLTTGSAPGQDLRFSYEKVEAVWN--FANKIWN 581



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 31/173 (17%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G      A
Sbjct: 38  EKKPYTIVIPPPNVTGKLHLGHAWDTALQDILTRMKRMQGYDVLWLPGMDHAG-----IA 92

Query: 63  QNAGVTTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTE 99
             A V  K+  +  SR       F + A      Y  FIR                 T +
Sbjct: 93  TQAKVEAKLREEGKSRYDLGREKFTEEAWKWKAEYAQFIRKQWAKLGLGLDYSRERFTLD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151
           +      + ++  +  KG IY+G Y   W      A  + + VYK   G +Y+
Sbjct: 153 EGLSKAVKEVFVSLYKKGLIYRGEYIINWDPETKTALSDIEVVYKEVQGAFYH 205


>gi|126653698|ref|ZP_01725617.1| valyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589735|gb|EAZ83870.1| valyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 881

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  +    +++P +  V G DI+ F    W + ++   L  
Sbjct: 448 VLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLVTGYDIIFF----WVSRMIFQGLEF 503

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DP++VIE+ G D+LRYFL    + G+D  
Sbjct: 504 TEQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFLATGSSPGQDLR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396
           Y  + ++   N   +N I N    +    L + DGM    I   G  + +D+ IL+  + 
Sbjct: 564 YTTEKVEAVWN--FSNKIWN----ASRFALMNMDGMTYDEIDLTGEKSVADKWILTRLNE 617

Query: 397 VLQEI 401
            ++ +
Sbjct: 618 TIERV 622



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G      A  A V
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAG-----IATQAKV 96

Query: 68  TTKVFVDQNSR---------------------NFRDMADVLDISYDDFIR---TTEKRHH 103
             K+  D  +R                     + RD    L +   D+ R   T +K   
Sbjct: 97  EAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGL-DYTRERFTLDKGLS 155

Query: 104 DTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +    ++ ++ +KG IY+G     W      A  + + +Y+   G +Y+ ++
Sbjct: 156 EAVNTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIYQDVQGAFYHMKY 207


>gi|169829404|ref|YP_001699562.1| valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168993892|gb|ACA41432.1| Valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 881

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  +    +++P +  V G DI+ F    W + ++   L  
Sbjct: 448 VLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLVTGYDIIFF----WVSRMIFQGLEF 503

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DP++VIE+ G D+LRYFL    + G+D  
Sbjct: 504 TEQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIEQYGADSLRYFLATGSSPGQDLR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396
           Y  + ++   N   +N I N    +    L + DGM    I   G  + +D+ IL+  + 
Sbjct: 564 YTTEKVEAVWN--FSNKIWN----ASRFALMNMDGMTYDEIDLTGEKSVADKWILTRLNE 617

Query: 397 VLQEI 401
            ++ +
Sbjct: 618 TIERV 622



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G      A  A V
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAG-----IATQAKV 96

Query: 68  TTKVFVDQNSR---------------------NFRDMADVLDISYDDFIR---TTEKRHH 103
             K+  D  +R                     + RD    L +   D+ R   T +K   
Sbjct: 97  EAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGL-DYTRERFTLDKGLS 155

Query: 104 DTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +    ++ ++ +KG IY+G     W      A  + + +Y+   G +Y+ ++
Sbjct: 156 EAVNTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIYQDVQGAFYHMKY 207


>gi|168024570|ref|XP_001764809.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684103|gb|EDQ70508.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 906

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 49/216 (22%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    DK L   E     I+P +R  ++ +F  S +KD  +SR+ + WG +IP   
Sbjct: 357 WFVIMQPLADKALKALEDGELRIIP-DRFEKIYNFWLSNIKDWCVSRQLW-WGHRIPVWY 414

Query: 222 ----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNPD 249
               D+  YI+                              W  +     +T G+ +   
Sbjct: 415 VEGSDESDYIVARSEEDAYKAARAKHGEDVKLTQESDVLDTWFSSGLWPFSTLGWPNTSA 474

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEK 302
               +F+P  +   G DIL F    W A ++      +  LP    V+ HG +   +G K
Sbjct: 475 DDYQRFYPTAVLETGHDILFF----WVARMIMMGIEFTGKLPF-STVYLHGLVRDAQGRK 529

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +SKSLGNVIDP++ IEE G DALR+ L      G+D
Sbjct: 530 MSKSLGNVIDPLDTIEEYGTDALRFTLATGTTPGQD 565


>gi|330834408|ref|YP_004409136.1| valyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566547|gb|AEB94652.1| valyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 808

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 20/266 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  +G+  + +   AK +PAD+ + G DI+R    Y  +   +L+ N+P  
Sbjct: 471 VWIDSSVTVLYLSGFYTDREKF-AKVFPADVRLQGTDIIRTWLFYTLFRTLILADNVPF- 528

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           KKV  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +
Sbjct: 529 KKVIVHGQVLGPDGTRMSKSKGNVVSPLDRLDEFGADAIRMTLL-DASLGDDFPFKWDTV 587

Query: 347 KKRVNADLAN-GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K +          G L    +          +  P +    D+ IL+     +++  +  
Sbjct: 588 KGKKLLLQKLWNAGRLAYPFIK------GNNVHKPDSLHLLDQWILAKHKEFVEKSIQAY 641

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +NQ     L+ + +   E   D Y +      +K        + +Y    VI+ L ILL 
Sbjct: 642 ENQDFFVILSMLYNYFWETIADEYLEL-----IKHRLFSGDESAIYTLKRVIKDLIILLH 696

Query: 464 AFVPKLANKIFDILFVADENRCFQSL 489
              P +  +I+ +LF   E+   +S+
Sbjct: 697 PIAPHITEEIYSLLFGEKESVLLESI 722



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 28/49 (57%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
            +I T   + + + H+GHAY + IAD + RF +L G +VL   G D  G
Sbjct: 52  FFIDTPPPFTSGELHMGHAYWVTIADAMGRFKKLQGYNVLLPQGWDTQG 100


>gi|308174506|ref|YP_003921211.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607370|emb|CBI43741.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554425|gb|AEB24917.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912829|gb|AEB64425.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 880

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 33/281 (11%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++  D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFKRYYSTDVLVTGYDIIFF 491

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L        K V  HG I   +G K+SKSLGN +DP++VI++ G D+
Sbjct: 492 ----WVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADS 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LRYFL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   
Sbjct: 548 LRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN----ASRFALMNMDGMTYDELDLS 601

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G  + +D+ IL+  +  ++++ +             + + + +   D Y +  K   L  
Sbjct: 602 GEKSVADKWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWYIEMAK---LPL 658

Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D A+  T   V   V+ Q   LL  F+P L  +I+  L
Sbjct: 659 YGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G      A  A V
Sbjct: 43  SVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR       F +        Y DFIR                 T ++  + 
Sbjct: 98  EAKLREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLNK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHLRY 208


>gi|307288317|ref|ZP_07568312.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306500703|gb|EFM70025.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165976|gb|EFU09993.1| valyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 880

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ D       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|228997294|ref|ZP_04156916.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|229004919|ref|ZP_04162646.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228756267|gb|EEM05585.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228762386|gb|EEM11311.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 1033

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 15/256 (5%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   A L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGVDQTRGWFYSLLAVAALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +P  K+V S G +L  +G+K+SKS GN +DP+E++E+ G DALR+ L+ + A      + 
Sbjct: 572 VPY-KRVLSLGHVLDEQGQKMSKSKGNALDPVELVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  +++   + L + + N+ S  V    L  Y+         T+ DE +LS     ++++
Sbjct: 631 ERTVQE-AKSKLVDTLVNVYSFYVLYTNLDKYNPKEKYEVKRTKLDEWVLSRLHSTVKQV 689

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQ 457
           R  +       A  ++  LV EV  ++      + WE    N ++A+   Y T+ EV+  
Sbjct: 690 RNALDEYQFTNAAREIAVLVDEVSNWYVRRSRNRFWE-SGMNLEKAAA--YETLHEVLVT 746

Query: 458 LAILLQAFVPKLANKI 473
           L+ LL  F P +A  I
Sbjct: 747 LSKLLAPFTPFVAEDI 762



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHG 88


>gi|242373956|ref|ZP_04819530.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348310|gb|EES39912.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 887

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 454 VLDTWFSSALWPFSTLGWPDTDSEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 509

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 510 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 569

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  ++
Sbjct: 570 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGELSLADKWILTRLNETIK 627

Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              E+ +  +   + RAL   I      D Y +  K   +   +  +  T   V   V+ 
Sbjct: 628 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNSDDETQKQTTRSVLSYVLD 685

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +   I+  L
Sbjct: 686 KIMKMLHPFMPFVTETIWQSL 706



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G  IA
Sbjct: 41  EDKSKDTYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 98

Query: 60  KAAQ 63
             A+
Sbjct: 99  TQAK 102


>gi|255970840|ref|ZP_05421426.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256958166|ref|ZP_05562337.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860819|ref|ZP_07106906.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307275085|ref|ZP_07556239.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899334|ref|ZP_07758668.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312952220|ref|ZP_07771097.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|255961858|gb|EET94334.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256948662|gb|EEU65294.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849858|gb|EFK77608.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306508203|gb|EFM77319.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310629807|gb|EFQ13090.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293536|gb|EFQ72092.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315036220|gb|EFT48152.1| valyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315154542|gb|EFT98558.1| valyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315160097|gb|EFU04114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315169319|gb|EFU13336.1| valyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315174736|gb|EFU18753.1| valyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 880

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 AAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|47458993|ref|YP_015855.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614378|sp|Q6KID2|SYV_MYCMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|47458321|gb|AAT27644.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 839

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 9/141 (6%)

Query: 243 GYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL- 297
            +L+ P  S+   +++P  + V   DI+ F    +Y+       N+P  KK   HG I  
Sbjct: 454 SFLNWPQKSEFLKRYYPTSVIVTAYDIIFFWVARMYFMGIYSMKNIPF-KKALIHGLIRD 512

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN IDP+++IE+ G D+LR+FL+     G+D  ++ D ++      L N 
Sbjct: 513 EQGRKMSKSLGNGIDPMDLIEKYGADSLRWFLMTNSTPGQDIRFNYDKIESA--WSLINK 570

Query: 358 IGNLVSRSVSMILKDYDGMIP 378
           I N +SR + M+  D   +IP
Sbjct: 571 IWN-ISRYIKMLDSDKKEIIP 590



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
          PN   + HIGHA+   + D L R  RL G DVL+  GTD  G       +   +  K+F
Sbjct: 41 PNVTGKLHIGHAWNTTLQDFLIRLKRLQGYDVLWLPGTDHAGIATQAKVEKRLLDQKIF 99


>gi|257888392|ref|ZP_05668045.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293570381|ref|ZP_06681438.1| valyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257824446|gb|EEV51378.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|291609559|gb|EFF38824.1| valyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 881

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 53/349 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312
              V G DI+ F    W + ++  +L        + V  HG I   +G K+SKSLGN ID
Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   +
Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588

Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +GM    I   G  + +D  IL+  +  +  + E         A  Q+ + + +   D 
Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|321312568|ref|YP_004204855.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018842|gb|ADV93828.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 804

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEELDWPESIKDMQR 219



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348
           S GNV++P E++   G D LR +      L   IA  + G    DG ++           
Sbjct: 580 SKGNVVNPDEIVSSHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFVE 636

Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376
               +N  +  G G  + R    +V  +   Y+G+
Sbjct: 637 ENGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671


>gi|255657212|ref|ZP_05402621.1| valyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451948|ref|ZP_06893663.1| valine--tRNA ligase [Clostridium difficile NAP08]
 gi|296259139|gb|EFH06019.1| valine--tRNA ligase [Clostridium difficile NAP08]
          Length = 888

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286
            W  +     +T G+   P+ ++A   ++P  + V G DI+ F  +    A +   N   
Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKD 344
              V  HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ L    + G D  FY + 
Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYME- 569

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             +     + AN + N  SR V M     I+K+           T +D+ I+S  + +++
Sbjct: 570 --RVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVK 625

Query: 400 EIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E   NM    +  AL ++     SE  D Y +  KP  L   + +  S  LY    V+ +
Sbjct: 626 EATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDTNAKSAALYTLTYVLEK 684

Query: 458 LAILLQAFVPKLANKIF 474
           +  LL  ++P +  +I+
Sbjct: 685 ILKLLHPYMPFITEEIY 701


>gi|258592110|emb|CBE68415.1| leucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 864

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y+     YP+ + H+GH     I DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  ERRKFYLLEMYPYPSGRIHMGHVRNYAIGDVLARFLRMRGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R     +  SYD    I  ++  ++   + L+ K+ +KG +Y
Sbjct: 91  IEHRTQPARWTSDNIAYMRTQLKRMGFSYDWQREITCSDPAYYRWGQWLFLKLYEKGLVY 150

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           K   +  W  +      N+       +G         V   E  G+FFR++AY D+LLS 
Sbjct: 151 KKSSAVNWCEVCQTVLANEQ-----VEGGLCWRDGTSVVQKELPGWFFRITAYADELLSS 205

Query: 180 YESHPEFILPIE 191
            ++   +  P++
Sbjct: 206 LDNLSGWPEPVK 217



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 24/183 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP +++ + G D  R F +      +D  +   G++         G   
Sbjct: 613 EKMSKSKKNVVDPEDLLTQYGADTARIFCLFAAPPERDLEWSDQGVE---------GSFR 663

Query: 361 LVSRSVSMILKDYDGMIPTPG---AFTE--SDESILSVCSRVLQEIRENMQNQL-IHRAL 414
            + R V +I +D + ++  P    AF +  +  ++     + ++ + E++++    + A+
Sbjct: 664 FLCRIVRLI-EDQEALLKEPNPSIAFQKLIAGRALYRKAQQTIKRVTEDIEDDFHFNTAI 722

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + ++ L +E+ R+       EL  +  D A          +  L +LL  F P L  +++
Sbjct: 723 SALMELANEIGRF-------ELVGSA-DDADERRVAYSYAVETLLLLLSPFAPHLCEELW 774

Query: 475 DIL 477
           + L
Sbjct: 775 ERL 777


>gi|257899235|ref|ZP_05678888.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837147|gb|EEV62221.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 881

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 53/349 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312
              V G DI+ F    W + ++  +L        + V  HG I   +G K+SKSLGN ID
Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   +
Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588

Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +GM    I   G  + +D  IL+  +  +  + E         A  Q+ + + +   D 
Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYANHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|327354732|gb|EGE83589.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 966

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHMGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G+    +  QN  N ++    +   +D   + +  + + +  T RI    + +KG  Y
Sbjct: 123 ERGIDPARWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIF-LMLYEKGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           +      Y   D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKALVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKVELKQWFFRITAFKEALLKDL 238

Query: 178 -SYYESHPEFILPIER 192
            S     PE +L ++R
Sbjct: 239 DSLAAGWPERVLSMQR 254


>gi|291485466|dbj|BAI86541.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 804

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEELDWPESIKDMQR 219



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348
           S GNV++P E++   G D LR +      L   IA  + G    DG ++           
Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFIE 636

Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376
               +N  +  G G  + R    +V  +   Y+G+
Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671


>gi|254976852|ref|ZP_05273324.1| valyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094239|ref|ZP_05323717.1| valyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315992|ref|ZP_05357575.1| valyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518649|ref|ZP_05386325.1| valyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651771|ref|ZP_05398673.1| valyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684797|ref|YP_003216082.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688455|ref|YP_003219589.1| valyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260210960|emb|CBA66224.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214472|emb|CBE06944.1| valyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 888

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 19/256 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286
            W  +     +T G+   P+ ++A   ++P  + V G DI+ F  +    A +   N   
Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              V  HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ L    + G D  +  + 
Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYMER 570

Query: 346 LKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++   N   AN + N  SR V M     I+K+           T +D+ I+S  + +++E
Sbjct: 571 VEFARN--FANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVKE 626

Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              NM    +  AL ++     SE  D Y +  KP  L   + +  S  LY    V+ ++
Sbjct: 627 ATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEKI 685

Query: 459 AILLQAFVPKLANKIF 474
             LL  ++P +  +I+
Sbjct: 686 LKLLHPYMPFITEEIY 701


>gi|52424393|ref|YP_087530.1| leucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|60390681|sp|Q65VR5|SYL_MANSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52306445|gb|AAU36945.1| LeuS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 860

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     IADV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIADVVSRYQRMNGKNVLQPVGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L  SY  D  I T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIDYMKNQLKMLGFSYDWDREIATCKPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   DE    +++V++G   +       PV+  E   +F +++ Y ++LLS  +
Sbjct: 152 KTSVVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLSGLD 207

Query: 182 SHPEF 186
           + PE+
Sbjct: 208 TLPEW 212



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/136 (20%), Positives = 67/136 (49%), Gaps = 14/136 (10%)

Query: 296 ILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++H G  K+SKS  N IDP E++E+ G D +R F++          + + G++       
Sbjct: 612 LVHAGMTKMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE------- 664

Query: 355 ANGIGNLVSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLI 410
             G    + R  +++    K+     P P A + + +++     + + ++ +++ + Q  
Sbjct: 665 --GAKRFLGRLWNLVFEYNKNPVKTAPNPTALSSAQKALRRDVHKTIAKVSDDIGRRQTF 722

Query: 411 HRALAQVISLVSEVDR 426
           + A+A ++ L++++ R
Sbjct: 723 NTAIAAIMELMNKLTR 738


>gi|16080084|ref|NP_390910.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310971|ref|ZP_03592818.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315298|ref|ZP_03597103.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320215|ref|ZP_03601509.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324497|ref|ZP_03605791.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|3123286|sp|P36430|SYL_BACSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2293181|gb|AAC00259.1| leucine tRNA synthetase [Bacillus subtilis]
 gi|2635516|emb|CAB15010.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 804

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEELDWPESIKDMQR 219



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348
           S GNV++P E++   G D LR +      L   IA  + G    DG ++           
Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFIE 636

Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376
               +N  +  G G  + R    +V  +   Y+G+
Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671


>gi|227550359|ref|ZP_03980408.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897234|ref|ZP_05676887.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378006|ref|ZP_06624184.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227180498|gb|EEI61470.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833799|gb|EEV60220.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643371|gb|EFF61503.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 881

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 53/349 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++    K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMAPLAKKAIDNQETDQAVEFFPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                                   DP  ++  W  +     +T G+ D       +++P 
Sbjct: 420 WYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDYKRYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVID 312
              V G DI+ F    W + ++  +L        + V  HG I   +G K+SKSLGN ID
Sbjct: 479 STLVTGYDIIFF----WVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGID 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   +
Sbjct: 535 PMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---N 588

Query: 373 YDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +GM    I   G  + +D  IL+  +  +  + E         A  Q+ + + +   D 
Sbjct: 589 IEGMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V  + Q+  LL   +P +  +I++
Sbjct: 649 YIEMSKE-VLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWE 696



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    +  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDDGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+  +
Sbjct: 160 KVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIHKDIEGAFYHMSY 207


>gi|56421173|ref|YP_148491.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819656|sp|Q5KWL3|SYV_GEOKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56381015|dbj|BAD76923.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 880

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 40/229 (17%)

Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239
           ++D  +SR+ + WG +IP                         DP  ++  W  +     
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPF 460

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ D       +++P D+ V G DI+ F    + +     +   P  K V  HG + 
Sbjct: 461 STMGWPDTESPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN
Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577

Query: 357 GIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEI 401
            I N    +    L +  GM    +   G  T +D  IL+  +  ++ +
Sbjct: 578 KIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLNETIETV 622



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++            T  + ++ + + R     L +   D+ R   T ++      R 
Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  +  KG IY+G Y   W  +   A  + + VYK   G  Y+ ++
Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRY 208


>gi|49475806|ref|YP_033847.1| valyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647788|sp|Q6G2V3|SYV_BARHE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49238613|emb|CAF27854.1| Valyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 907

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 20/268 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +T G+  N     A F+P  L V G DI+ F    W A
Sbjct: 470 VNLTRDPD-VLDTWFSSALWPFSTLGW-PNKTPELATFYPTSLSVTGFDIIFF----WVA 523

Query: 278 FLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            ++   L      P P  V+ H  +   KG K+SKS GN+IDP+E+I++   D+LR+ L 
Sbjct: 524 RMMMMGLHFMGEVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADSLRFTLA 582

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G+D   D   +    N   A  + N  +R   M    +D       A    +  I
Sbjct: 583 IMAAQGRDVKLDPSRIAGYRN--FATKLWN-ATRFAQMNGVKHDPDFKPEKAKLALNRWI 639

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
           L+  S+ +  +   ++N   + + + +   +  +  D Y +  KP   + +N D  + V 
Sbjct: 640 LTELSKTVVAVTTGIENYKFNESASALYRFIWNTLCDWYLELLKP-IFQGSNEDAKNEVQ 698

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDI 476
             T  V+ ++  LL  F+P +  +++ +
Sbjct: 699 ACTAWVLDEVYKLLHPFMPHMTEELWSL 726


>gi|222151545|ref|YP_002560701.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120670|dbj|BAH18005.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 875

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D        F+P ++ V G DI+ F    W A ++   L  
Sbjct: 441 VLDTWFSSALWPFSTLGWPDTETIDYKTFYPTNVLVTGYDIIFF----WVARMIFQGLEF 496

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V  HG +    G K+SKSLGN +DP++VI++ G D+LRYFL    + G+D  
Sbjct: 497 TGKRPFDDVLIHGLVRAEDGRKMSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLR 556

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +DE IL+  +  + 
Sbjct: 557 YSTEKVEAAWN--FINKIWNASRFSLMNIGEDFKAEHIDLSGKKSLADEWILTRLNETIA 614

Query: 400 EI 401
           ++
Sbjct: 615 DV 616



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 27/166 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + HIGHA++  + D++ R  R+ G + L+  G D  G     K+    +
Sbjct: 36  TIVIPPPNVTGKLHIGHAWDTTLQDIITRMKRMQGYNTLYLPGMDHAGIATQAKVEAKLR 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106
             GV+     D     F +        Y  FIR                 T ++   +  
Sbjct: 96  EEGVSRH---DIGRTKFLEHTMEWKEEYAGFIRQQWAKLGLGLDYSRERFTLDEGLSEAV 152

Query: 107 RILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           + ++ K+ +KG IY+G     W  +   A  + + +++  +G +Y+
Sbjct: 153 KEVFVKMYEKGLIYRGERIINWDPVARTALSDIEVIHEEVEGAFYH 198


>gi|23097817|ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81747084|sp|Q8ET99|SYI2_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|22776041|dbj|BAC12318.1| isoleucyl tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 1022

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 13/232 (5%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD+ + G D  R  F+++   + L +   P  K+V S G IL + G K+SKS GN 
Sbjct: 532 KQFPADVVIEGVDQTRGWFYSLLAVSTLFTGKTPY-KRVLSLGHILDEHGRKMSKSKGNA 590

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMI 369
           + P+E+IEE G DALR+ L+ + +   +  + K  +  +  + + + I N+ S  S+   
Sbjct: 591 LSPVELIEEFGADALRWALLADSSPWNNKRFSKKTV-SQAKSKVIDTILNVYSFYSMYAD 649

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF- 428
           +  ++       A T  D  ILS  + V++E+  ++    I +    +   V E+  ++ 
Sbjct: 650 IDKFNVAEHATDAKTTLDSWILSRLNSVIKEVTTSLDQYDITKGARSIALFVDELSNWYV 709

Query: 429 --DAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               Q+ W        +A+ T L+   EV+ +L  L+  ++P +A+ I+  L
Sbjct: 710 RRSRQRFWSSGMNEDKKAAFTTLH---EVLSKLTQLMAPYIPFVADDIYTNL 758



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH GHA    I D +AR+  + G  VL   G D HG
Sbjct: 43 NGMPHAGHALGRTIKDFVARYKTMSGYQVLRKAGWDTHG 81


>gi|113476946|ref|YP_723007.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110167994|gb|ABG52534.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 911

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGK 265
           L +++K F   +KI  DP  ++  W  +     +T G+ +N PD    K++P      G 
Sbjct: 447 LEVAKKKFGDHVKIQQDPD-VLDTWFSSSLWPFSTLGWPENTPD--LEKYYPTSTLSTGF 503

Query: 266 DILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           DI+ F    W A +      L+  +P  + V+ HG +L   G+K SKS GN I+P+ +IE
Sbjct: 504 DIIFF----WVARMTMMGVHLTGKMPF-ETVYIHGLMLDENGKKQSKSAGNGINPLLLIE 558

Query: 319 EVGVDALRYFLVREIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + G DALRY L+RE A  G+D   D +    +  + + +    N +  +   ++   +G 
Sbjct: 559 KYGTDALRYTLMRETAGAGQDVRMDYNRETDESASVEASRNFTNKIWNAARFVMMKLEGK 618

Query: 377 IPTPGAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            P      E D+       ILS   + +Q+  + + N  +  A   +   +     D Y 
Sbjct: 619 TPEELGKPEVDKLELVDRWILSHFYQTVQQTCDYLDNYGLGEAAKGLYEFIWGYFCDWYL 678

Query: 429 DAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +  K     +    R     T+ YV   ++R    LL  F+P +  +I+  L    E  C
Sbjct: 679 ELVKSRLQGEDENSRLVAQQTLAYVLDGILR----LLHPFMPHITEEIWHTLNQVGEENC 734

Query: 486 F 486
            
Sbjct: 735 L 735


>gi|302528931|ref|ZP_07281273.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437826|gb|EFL09642.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 875

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 133/324 (41%), Gaps = 44/324 (13%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------- 221
           I P E       +V + + D ++SR+ + WG +IP                         
Sbjct: 388 IHPAELEKRYFDWVDN-MHDWTISRQLW-WGHRIPVWYGPDGEVVCVGPDEQPPSGEGWT 445

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--- 278
            DP  ++  W  +    ++T G+ +      AKF+P  +   G DIL F  +    F   
Sbjct: 446 QDPD-VLDTWFSSGLWPMSTMGWPEE-TADLAKFYPTSVLSTGYDILFFWVVRMMMFGVQ 503

Query: 279 LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +    P    V+ HG I    G+K+SKS GNVIDP+E ++  G DA R+ L R    G 
Sbjct: 504 EMDGKQPF-DHVYLHGLIRDANGKKMSKSRGNVIDPLEWMDAYGADATRFTLARGANPGA 562

Query: 338 D-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           D    D+     R   +    + N  S+   M     DG +P     TESD  IL   + 
Sbjct: 563 DMALADEWAAGSR---NFCTKLWN-ASKFAMMNGATADGELPPAAELTESDRWILGRLAA 618

Query: 397 VLQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           ++ E+    E+ Q   +  AL Q  +     D Y +  K  +L + +  R      V  +
Sbjct: 619 LVSEVDGLFEDFQFAKVANALYQ-FTWNELCDWYLELAKV-QLYQGDSARVEATRKVLGQ 676

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  +  LL  F+P +  K++  L
Sbjct: 677 VLDTVLRLLHPFIPFVTEKLWTAL 700


>gi|26554335|ref|NP_758269.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747446|sp|Q8EUN9|SYI_MYCPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|26454344|dbj|BAC44673.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 900

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 15/179 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T+Y            +    +PADL+  GKD  R  F++    +       
Sbjct: 522 IMDVWFDSGTSYSVLQ--------ADKLGYPADLYFEGKDQFRGWFNSSLITSVAAFKKS 573

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K++ +HGF+L   G K+SKSLGN+IDP++V +E G D LR + V  +   KD    K
Sbjct: 574 PY-KELLTHGFVLDENGNKMSKSLGNIIDPLQVCKEYGADVLRLW-VASVDFSKDVSISK 631

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           D + +  NA+L   I N + R +   L  ++        ++E+D  +LS  S  ++ I+
Sbjct: 632 DIIAQ--NAELYRRIRNTLFRFILGNLNGFNLKKLRGAKYSEADLYVLSCLSNDIKTIK 688



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQN 64
           I+    Y N   H GHA   I+ D++ RF    G    +  G D HG    Q++AK   N
Sbjct: 53  IADGPPYANGDLHTGHALNKILKDIILRFKASVGFYTKYIPGWDTHGLPIEQEMAKRGLN 112

Query: 65  AGVTTKVFVD-QNSRNF 80
                 +    +N +NF
Sbjct: 113 KNANQTITEKRKNCKNF 129


>gi|320161686|ref|YP_004174911.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995540|dbj|BAJ64311.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 1051

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 32/272 (11%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +  +    Y  +N D  K +F PAD      D  R  F++++  + LL  +   
Sbjct: 523 VWFDSGSMPVAQWHYPFENQDIFKKQF-PADFICEAVDQTRGWFYSLHAISTLL-FDSEC 580

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V   G IL K G+K+SKS GN++DP +VI + G DA+R++L      G++       
Sbjct: 581 YKNVICLGLILDKNGQKMSKSRGNIVDPWDVIRQHGADAMRWYLYTATPPGQE------- 633

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTPGA---FTESDESILSV 393
             +R +A+L   +G +VS     +   Y         DG  P PGA   +   D  +LS 
Sbjct: 634 --RRFSAEL---VGEVVSNFTLTLWNTYSFFVTYANLDGWKPEPGAQVQYNSLDRWLLSA 688

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV- 452
              +++++   ++   +  A   + + V ++  ++  +      K+  D      Y T+ 
Sbjct: 689 LHALVRDVTNALETYDVLGATRPIETFVDQLSNWYLRRSRRRFWKSGSDADKKAAYATLY 748

Query: 453 EVIRQLAILLQAFVPKLANKIF-DILFVADEN 483
           E +  L+ LL   +P LA +++ +++   DEN
Sbjct: 749 EALVTLSKLLAPTMPFLAEELYQNLVRSVDEN 780


>gi|296879657|ref|ZP_06903634.1| valine--tRNA ligase [Clostridium difficile NAP07]
 gi|296429370|gb|EFH15240.1| valine--tRNA ligase [Clostridium difficile NAP07]
          Length = 834

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286
            W  +     +T G+   P+ ++A   ++P  + V G DI+ F  +    A +   N   
Sbjct: 400 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 456

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKD 344
              V  HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ L    + G D  FY + 
Sbjct: 457 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYME- 515

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             +     + AN + N  SR V M     I+K+           T +D+ I+S  + +++
Sbjct: 516 --RVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIVK 571

Query: 400 EIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E   NM    +  AL ++     SE  D Y +  KP  L   + +  S  LY    V+ +
Sbjct: 572 EATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDTNAKSAALYTLTYVLEK 630

Query: 458 LAILLQAFVPKLANKIF 474
           +  LL  ++P +  +I+
Sbjct: 631 ILKLLHPYMPFITEEIY 647


>gi|257080637|ref|ZP_05574998.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|307290155|ref|ZP_07570074.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|256988667|gb|EEU75969.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|306498783|gb|EFM68281.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
          Length = 880

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ D       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|148240776|ref|YP_001226163.1| valyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147849315|emb|CAK24866.1| Valyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 914

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P +  V G DI+ F    +   A   +  +
Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTNTLVTGFDIIFFWVARMTMMAGAFTGEM 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  + V+ HG +   +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D
Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579

Query: 343 KD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D         + +    N +  +    L +  G  P       P A   +D  ILS  +
Sbjct: 580 YDRKTDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLA 639

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446
           RV +E  E   +  +  A   +         D Y +  K    ++ NP    +       
Sbjct: 640 RVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 695

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474
                V  +VI Q+ ++L   +P L  +++
Sbjct: 696 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 725


>gi|289643174|ref|ZP_06475302.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata]
 gi|289507005|gb|EFD27976.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata]
          Length = 685

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 105/512 (20%), Positives = 197/512 (38%), Gaps = 49/512 (9%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +++ +    PN   H+GH A   + AD   RF R++G      TG+D+    +   A+  
Sbjct: 122 VFVFSTPPTPNGDLHLGHLAGPYLGADAYVRFQRMNGASAWHLTGSDDFQSYVVDRARRE 181

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G ++       S    +   ++DI  D +  T  +  +    +  + ++ D G I     
Sbjct: 182 GRSSAEVAAHYSAEIAETLRLMDIPLDQYTVTNADPGYVPALKDFFTRLVDAGAIAPADG 241

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA------------- 171
              +  R   Y  + +V+ G  G       N  +   E      L+              
Sbjct: 242 PALFDPRTGQYLYEVDVHGGCPGCGEATAGNICELCGEPNTVVDLAGPVAGPSGETPVTG 301

Query: 172 -YQDKLLSYYESHPEFILPIERRNEVIS--------FVKSGLKDLSLSRKTFDWGIKIP- 221
             +  +L  +E H + +L  +RR  V +          + G  D+ +S  + DWGI IP 
Sbjct: 302 TARRYVLPLHE-HADAVLDHQRRGRVPARLRELAARLFRRGRIDIPVSHPS-DWGI-IPR 358

Query: 222 --DDPQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFWPAD----LHVIGKDILRFHA 272
             D    +++ W +    +L      G     D + A+  PAD    +H  G D   +HA
Sbjct: 359 EADGAGQVIWAWPEMAFGFLHGIQRFGERLGRDWTAAR--PADDWKVVHFFGYDNSFYHA 416

Query: 273 IYWPAFLLSANLPLPKKV-----FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           I +P       L LP          + F+L+ G K S S  + +   ++++   VDA+RY
Sbjct: 417 ILYPVLY---RLALPGWTPDIDYHVNEFLLYDGLKFSTSRRHAVWGKQILDADSVDAVRY 473

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           FL R     +   +  D  +  +   L       +      +   YD ++P  G +T   
Sbjct: 474 FLARNRPEVERTNFTLDAYEHTLTTTLIGTWQAWLHDLGQRVADRYDAVVPDAGNWTPEH 533

Query: 388 ESILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
              L   +  L  +  ++Q     +++A A++ +LV++  R+   ++        PD   
Sbjct: 534 AGFLGQLAARLGALAASLQPGGFSLNQAAAELDALVTDTVRFSRRERALAAAGGMPDEVR 593

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T   + +     LA      +P+ A ++ + L
Sbjct: 594 TTTALELAAAWLLAHAATPVMPRFAARLAEAL 625


>gi|251780852|ref|ZP_04823772.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085167|gb|EES51057.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 880

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 31/236 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308
           F+P ++ V G DI+ F    W A ++ + L    +     V  HG I   +G K+SKSLG
Sbjct: 478 FYPNNVLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366
           N ++P++VI E G DALR+ +    A G D  Y      +RV A  + AN I N  SR V
Sbjct: 534 NGVNPLDVISEYGADALRFMIATGNAPGNDMRY----YPERVEASRNFANKIWN-ASRFV 588

Query: 367 SM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            M     I+  Y   +     ++ +D+ ILS  + +++E+ ENM    +  A+ +V   +
Sbjct: 589 MMNLDKEIMNKYKDCV----EYSLADKWILSKMNTLVKEVTENMDKYELGIAMQKVYDFM 644

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474
                D Y +  KP  +     ++A  V Y  +  +    + LL   +P +  +IF
Sbjct: 645 WTEFCDWYIELVKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIF 698


>gi|331701260|ref|YP_004398219.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128603|gb|AEB73156.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 886

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D+ +  K +++P D  V G DI+ F
Sbjct: 437 GMEAPKDAENWEQDPDVLDTWFSSALWPFSTMGWPDDTEDMK-RYFPTDTLVTGYDIIFF 495

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I   +G K+SKSLGN IDP++VI++ G DA
Sbjct: 496 ----WVSRMIFQSLEFTHERPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDVIDKYGADA 551

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FL      G+D  +  D +    N    N I N  SR V M L   D   +P    +
Sbjct: 552 LRWFLSIGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNLDGIDKPELPDKSEW 608

Query: 384 TESDESILSVCSRVLQEIRE 403
             SD+ ILS  +  +  + +
Sbjct: 609 QLSDKWILSRLNATVNHVSD 628



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  +  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 43  SIVLPPPNVTGKLHLGHAWDTTLQDMIIRRKRMQGYDTLWLPGMDHAGIATQAKVEAKLR 102

Query: 64  NAGVT-----TKVFV-------DQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++      + FV       D  +R  ++    L +S  D+ R   T +K      R 
Sbjct: 103 KQGISRYDLGREKFVEKVWEWKDDFARTIKEQWAKLGLSL-DYSRERFTLDKGLSKAVRK 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  + +KG IY+G Y   W      A  + + ++K   G +Y+ ++
Sbjct: 162 VFVTLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDDKGAFYHVKY 208


>gi|327399172|ref|YP_004340041.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181801|gb|AEA33982.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 873

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 62/325 (19%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDA 234
            +KD  +SR+ + WG +IP              D+P+               ++  W  +
Sbjct: 394 NIKDWCISRQLW-WGHRIPVWKCEDCGKYTVSEDEPKACEHCGSDKLVQEEDVLDTWFSS 452

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV---- 290
               ++T G+ +  D  K +F+P  L V G DI+ F    W A ++   L   K V    
Sbjct: 453 ALWPMSTLGWPNQTDDLK-RFYPTSLLVTGFDIIFF----WVARMMMMGLHFMKDVPFRD 507

Query: 291 -FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK- 347
            + H  +  + G+K+SK+ GNVIDP+EV+E+ G D++R+ L    A G+D    +D ++ 
Sbjct: 508 VYIHALVRDQYGQKMSKTKGNVIDPLEVVEKYGADSMRFTLAILAAQGRDIKLSEDKIEG 567

Query: 348 -KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            KR    + N    +   +  M LK+       P   + +   I S  ++ ++++ +++ 
Sbjct: 568 YKRFMNKIWNAYRFIKINTEGMELKE------KPKKLSPASIWIKSRLAKTIRKVEQSLS 621

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A + +   +     D Y +  K       + + + ++ +  +EV      LL  
Sbjct: 622 EYKFNEAASAIYQFIWHEFCDYYIEMSKV----HMDDEFSYSIKFTLLEVFEATLRLLHP 677

Query: 465 FVP--------KLANKIFDILFVAD 481
           F P        KL NK  D + +A+
Sbjct: 678 FTPFITEELWQKLPNKKGDSIIIAE 702



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     HIGHA    + D++ R+ R+ G +VL+  GTD  G
Sbjct: 36 SIVIPPPNVTGALHIGHALNGTLQDIMVRYKRMKGYNVLWVPGTDHAG 83


>gi|308125801|ref|ZP_07663528.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308113950|gb|EFO51490.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 364

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 11/188 (5%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKK 348
           +F HG++   G K+SKS G  +     ++ +  + LRY+   ++    D    + +   +
Sbjct: 1   MFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQ 60

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EIRENMQ 406
           RVNAD+ N I NL SR+   I K ++G +    A  E     ++   R+ +  E RE   
Sbjct: 61  RVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAAADRIAELFEARE--- 117

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQA 464
                RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+ 
Sbjct: 118 ---FGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKP 174

Query: 465 FVPKLANK 472
            +P LA +
Sbjct: 175 VMPALAAR 182


>gi|188587843|ref|YP_001921655.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498124|gb|ACD51260.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 880

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 23/232 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308
           F+P ++ V G DI+ F    W A ++ + L    +     V  HG I   +G K+SKSLG
Sbjct: 478 FYPNNVLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366
           N ++P++VI E G DALR+ +    A G D  Y      +RV A  + AN I N  SR V
Sbjct: 534 NGVNPLDVINEYGADALRFMIATGNAPGNDMRY----YPERVEASRNFANKIWN-ASRFV 588

Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L K+          ++ +D+ ILS  + +++E+ ENM    +  A+ +V   +    
Sbjct: 589 MMNLDKEIMNKYKDCKEYSLADKWILSKMNTLVKEVTENMDKYELGIAMQKVYDFMWTEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474
            D Y +  KP  +     ++A  V Y  +  +    + LL   +P +  +IF
Sbjct: 649 CDWYIELVKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIF 698


>gi|123969424|ref|YP_001010282.1| valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199534|gb|ABM71175.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 918

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 30/294 (10%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           + K F   IK+  D   ++  W  +     +T G+ +  D    K++P  + V G DI+ 
Sbjct: 455 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIF 513

Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           F    W A +       + N+P    V+ HG +     +K+SKS GN IDPI +I++ G 
Sbjct: 514 F----WVARMTMMGNTFTNNIPF-NDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 568

Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DALR+ L+RE+A  G+D   D D  K   +  + +    N +  +   +L   +      
Sbjct: 569 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 626

Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429
            +  ESDE+ L +C +     L ++   +   L    L +   L+ E       D Y + 
Sbjct: 627 YSLNESDETSLELCDKWILSKLNQVNIKVAGLLKEYKLGESAKLLYEFTWNDFCDWYVEF 686

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A++ +  K+T   + S    V ++V+  + +++  F+P +  +++ +L +  +N
Sbjct: 687 AKQRFNNKETKNRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDN 738



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+   + DV+ RF RL G +VL   GTD
Sbjct: 57 HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTD 88


>gi|198412086|ref|XP_002127207.1| PREDICTED: similar to methionine-tRNA synthetase, partial [Ciona
           intestinalis]
          Length = 280

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 5/191 (2%)

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+     G+D  +       + N++L N +GN ++RS+  +   Y G++P P  
Sbjct: 2   DIWRFYLLSMRPEGQDTHFSWSDFLLKNNSELLNNLGNFINRSLKFVSNAYGGVVPDP-V 60

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNP 441
              +D  +L++ +R L++   +M    I   L +++S+    ++Y    +PW+L K +N 
Sbjct: 61  LNNTDLELLALVNRELKDYVTDMDKLKIRDNLRRILSISRLGNQYLQENQPWKLIKGSNE 120

Query: 442 D--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           D  RASTV  +   +   L IL+  ++P+ ++ I D L +        ++ + L  G  +
Sbjct: 121 DKSRASTVTSIAANLSCLLCILIHPYMPQTSSIIQDQLNLRGGYLIPDAITRMLPSGHKI 180

Query: 500 HKTFDPIFPRF 510
           +K   P+F + 
Sbjct: 181 NKP-SPLFRKL 190


>gi|187933633|ref|YP_001886694.1| valyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721786|gb|ACD23007.1| valine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 880

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 23/232 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308
           F+P ++ V G DI+ F    W A ++ + L    +     V  HG I   +G K+SKSLG
Sbjct: 478 FYPNNVLVTGHDIIFF----WVARMIFSGLHCMGETPFNTVLIHGLIRDSQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSV 366
           N ++P++VI E G DALR+ +    A G D  Y      +RV A  + AN I N  SR V
Sbjct: 534 NGVNPLDVINEYGADALRFMIATGNAPGNDMRY----YPERVEASRNFANKIWN-ASRFV 588

Query: 367 SMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L K+          ++ +D+ ILS  + +++E+ ENM    +  A+ +V   +    
Sbjct: 589 MMNLDKEIMNKYKDCKEYSLADKWILSKMNTLVKEVTENMDKYELGIAMQKVYDFMWTEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474
            D Y +  KP  +     ++A  V Y  +  +    + LL   +P +  +IF
Sbjct: 649 CDWYIELVKP--VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFITEEIF 698


>gi|116071913|ref|ZP_01469181.1| valyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065536|gb|EAU71294.1| valyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 914

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 19/266 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    +   A   +  +
Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADAPDLNRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  + V+ HG +   +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D
Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLD 579

Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D  K      + +    N +  +    L +  G  P         A   +D  ILS  +
Sbjct: 580 YDRKKDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGEPDSAALQLADRWILSRLA 639

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVL 448
           RV +E  +   N  +  A   +         D Y +  K       NP  A+        
Sbjct: 640 RVNRETADRYSNYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAAALADQRVAK 699

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
            V  +VI Q+ ++L   +P L  +++
Sbjct: 700 QVLAKVISQMHLMLHPLMPHLTEELW 725


>gi|113954820|ref|YP_732013.1| valyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113882171|gb|ABI47129.1| valyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 914

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 28/290 (9%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L+ +++ F    +I  D + ++  W  +     +T G+ D       +++P    + G D
Sbjct: 442 LAKAQEQFGAEARIEQD-EDVLDTWFSSGLWPFSTLGWPDANAADLQRWYPTSTLITGFD 500

Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    +   A   +  +P  + V+ HG +   +  K+SKS GN IDP+ +IE  G D
Sbjct: 501 IIFFWVARMTMMAGAFTGEMPF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTD 559

Query: 324 ALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTP- 380
           ALR+ LVRE+A  G+D   D D  K      + +    N +  +    L +  G  P   
Sbjct: 560 ALRFALVREVAGAGQDIRLDYDRKKDTSATVEASRNFANKLWNATRFALMNLGGATPAEL 619

Query: 381 -----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
                 A   +D  ILS  +RV QE      +  +  A   +         D Y +  K 
Sbjct: 620 GEPEVSALRLADRWILSRLARVNQETAGRYSSYALGEAAKGLYEFAWNDVCDWYLELSK- 678

Query: 434 WELKKTNPDRAS---------TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++ NP             T   V  +VI Q+ ++L   +P L  +++
Sbjct: 679 ---RRLNPGEEPSAAALADQHTAKQVLAKVISQMHLMLHPLMPHLTEELW 725


>gi|318040771|ref|ZP_07972727.1| valyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 935

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 23/275 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLP 287
            W  +     +T G+ +       +++P  + V G DI+ F    +   A   +  +P  
Sbjct: 481 TWFSSGLWPFSTLGWPNAEAADLQRWYPTSVLVTGFDIIFFWVARMTMMAGAFTGQMPF- 539

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG 345
           + V+ HG +      K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D 
Sbjct: 540 QDVYIHGLVRDENNRKMSKSAGNGIDPLLLIDRYGADALRFALVREVAGAGQDIRLDYDR 599

Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCSRVL 398
                   + +    N +       L + DG  P       P A   +D  ILS  +RV 
Sbjct: 600 KSDTSATVEASRNFANKLWNVTRFALMNLDGETPASLGEPDPAALQLADRWILSRLARVN 659

Query: 399 QEIRENMQNQLIHRALAQVISLV-SEV-DRYFD-----AQKPWELKKTNPDRA----STV 447
           +E  E   N  +  A   +     +EV D Y +      Q P +L     + A     T 
Sbjct: 660 RETAERYGNYGLGEAAKGLYEFAWNEVCDWYVELIKRRLQVPADLDGAAREAALADQRTA 719

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             V  + + +L ++LQ  +P L  +++  L  A E
Sbjct: 720 RQVLAKALNELLVMLQPLMPHLTEELWHGLTGAGE 754


>gi|52081291|ref|YP_080082.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786670|ref|YP_092499.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647204|ref|ZP_08001426.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825234|sp|Q65GK8|SYV_BACLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52004502|gb|AAU24444.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349172|gb|AAU41806.1| ValS [Bacillus licheniformis ATCC 14580]
 gi|317390551|gb|EFV71356.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 880

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 27/278 (9%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D  +    +++P ++ V G DI+ F
Sbjct: 432 GVEAPEDAENWEQDKDVLDTWFSSALWPFSTMGWPDIDEEDFKRYYPTNVLVTGYDIIFF 491

Query: 271 --HAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + +     +   P  K V  HG I   +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 492 WVSRMIFQGIEFTGERPF-KDVLIHGLIRDDQGRKMSKSLGNGVDPMDVIDKYGADSLRY 550

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    + G+D  +  + ++   N   AN I N    +    L + DGM    +   G  
Sbjct: 551 FLATGSSPGQDLRFSFEKVESTWN--FANKIWN----ASRFALMNMDGMTYEELDLSGEK 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D+ IL+  +  ++ + +             + + + +   D Y +  K   L     
Sbjct: 605 SVADKWILTRLNETIETVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAK---LPLYGE 661

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D A+  T   +   V+ Q   LL  F+P L  +I+  L
Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHL 699



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 21/171 (12%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61
           EK   +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G    AK 
Sbjct: 38  EKEPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
                   K   D     F +        Y DFIR                 T ++    
Sbjct: 98  EAKLREEGKTRYDLGREKFLEETWNWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMRY 208


>gi|33866926|ref|NP_898485.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81573695|sp|Q7U3N4|SYV_SYNPX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33639527|emb|CAE08911.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 914

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 29/271 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    +   A   +  +
Sbjct: 461 VLDTWFSSGLWPFSTLGWPDAESADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  + V+ HG +   +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D
Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579

Query: 343 KD-----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVC 394
            D           + + AN + N  +R   M L D        P P A   +D  ILS  
Sbjct: 580 YDRKTDTSATVEASRNFANKLWN-ATRFALMNLGDETPAQLGDPDPAALQLADRWILSRL 638

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------ 446
           +RV +E  E   N  +  A   +         D Y +  K    ++ NP    +      
Sbjct: 639 ARVNRETAERYSNYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALAD 694

Query: 447 ---VLYVTVEVIRQLAILLQAFVPKLANKIF 474
                 V  +VI Q+  +L   +P L  +++
Sbjct: 695 QRVAKQVLAKVISQMHQMLHPLMPHLTEELW 725


>gi|254446147|ref|ZP_05059623.1| valyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260455|gb|EDY84763.1| valyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 944

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 40/263 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL-----------------P-KKVFSHGFI 296
           F+P    V G DI+ F    W A ++ A L L                 P K +F HG I
Sbjct: 515 FYPTSTLVTGFDIIFF----WVARMIMAGLELYGDDKKELTDDEIAARIPFKDIFIHGLI 570

Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              KG K+SK+LGN  DP+++IE+ G D LR+ ++     G D  + +D ++  +  + +
Sbjct: 571 RDEKGRKMSKTLGNSPDPLDLIEKFGADGLRFGIINIAPSGSDILFSEDRIE--IGRNFS 628

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-----VCSRVLQEIRENMQNQLI 410
           N + N        +    D      G       S L      + SR+L+ +RE ++ Q  
Sbjct: 629 NKLWNAC--RFRQMNGPADANATLDGILDRLQTSPLDGYSNWILSRMLETMRE-IEGQFA 685

Query: 411 HRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              + Q+ S +         D Y +A K    KK +P R +  L V+  VIRQ   LL  
Sbjct: 686 KFEMQQLTSTLYNFVWGDFCDWYVEAAKALLQKKEDP-RHNMALAVSDLVIRQALQLLHP 744

Query: 465 FVPKLANKIFDILFVADENRCFQ 487
            +P +  +++  +   +E    Q
Sbjct: 745 VMPHITEELWHAMGFCEEGAFIQ 767



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 26/183 (14%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     H+GH  +  + D+  R  RL+G   L+  GTD        K+ +A +
Sbjct: 74  SIMIPPPNVTGILHMGHVLDNTLQDIFIRRARLEGKSTLWFPGTDHASIATQTKVEQALR 133

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRI 108
             G + +             + D +     +    L  S  D+ RTT   ++ +  + R 
Sbjct: 134 AEGTSRREVGREKFLERAWQWSDDHGGKILNQLKKLGASC-DWRRTTFTMDESYERSVRA 192

Query: 109 LWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K+ D+G IY+G     W      A  N++ + K   G+++  ++  V   EE G F 
Sbjct: 193 AFVKLYDRGYIYRGKRLVNWCPSSQTALSNEEVIMKPQKGKFWKMRYELV---EEPGRFI 249

Query: 168 RLS 170
            +S
Sbjct: 250 EIS 252


>gi|198282759|ref|YP_002219080.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667702|ref|YP_002424955.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247280|gb|ACH82873.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519915|gb|ACK80501.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 821

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 22/200 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y      YP+ Q H+GH     IAD +AR+ R+ G +V+   G D  G     AA  
Sbjct: 34  DKFYALAMFPYPSGQLHMGHVRNYSIADAIARYQRMLGKEVMQPMGWDAFGLPAENAALK 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISDK 116
            G+    +   N  + R     L +SYD        R   TC        + L+ K+ +K
Sbjct: 94  HGLAPAQWTMDNIAHMRGQLQRLGLSYD------WSREFATCTPDYYRWEQWLFVKLWEK 147

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G +Y+   +  +   D+    +++V  G  G    A   PV+  E   YF R++AY ++L
Sbjct: 148 GLVYQKLSTVNWDPVDQTVLANEQVVDGC-GWRSGA---PVERKEIVQYFLRITAYAEEL 203

Query: 177 L----SYYESHPEFILPIER 192
           L    +  E  PE +L ++R
Sbjct: 204 LTGLDTLGEGWPEQVLTMQR 223



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAF--LLSANLPLP---------KKVFSHGFIL 297
           D   A + P D +V G +    H +Y   F  LL     LP         + + + G +L
Sbjct: 518 DQRAADWLPVDQYVGGVEHAVLHLLYARFFNRLLRDVGLLPADGAHDEPFRHLLTQGMVL 577

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             G K+SKS GN +DP  +I+  G D  R F++
Sbjct: 578 KDGSKMSKSKGNTVDPQGLIDRYGADTARLFIL 610


>gi|326803842|ref|YP_004321660.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650187|gb|AEA00370.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 881

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 29/276 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P+D +       ++  W  +     +T G+ D       +++P D  V G DI+ F
Sbjct: 431 GMEAPEDEENWVQDPDVLDTWFSSALWPFSTMGWPDEEASDYKRYFPTDTLVTGYDIIFF 490

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L        K V  HG I   +G K+SKSLGN +DP++V+++ G DA
Sbjct: 491 ----WVSRMIFQSLEFTGERPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMDVVDQYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LR+FL      G+D  Y  + L+   N    N I N  SR   M L   DGM    I   
Sbjct: 547 LRWFLATGSTPGQDIRYYPEKLEAAWN--FINKIWN-ASRYALMNL---DGMTYDDIDLN 600

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              +  D+ IL+  +  + ++ +         A   +   +     D Y +  K   L+ 
Sbjct: 601 NVTSIVDQWILTRLNETIAKVTDRFDAFEFGEAGRALYHFIWNDFCDWYIEMSKE-VLQG 659

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            + D   T   V   V+ Q+  LL   +P +  +I+
Sbjct: 660 DDEDAKHTTRSVLSYVLGQMLALLHPIMPFVTEEIW 695



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 46/179 (25%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA+++ + D++ R  R+ G D L+  G D           +AG+
Sbjct: 41  SVVIPPPNVTGKLHLGHAWDVTLQDMIVRQKRMQGYDTLWLPGMD-----------HAGI 89

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKIS---------- 114
            T+  V++  R   +++   D+  + FI  T   ++ +  T R  W K+           
Sbjct: 90  ATQAKVEEKLRKEENLSR-YDLGREKFIDKTWEWKEEYAQTIRNQWAKMGISVDYKRERF 148

Query: 115 ------------------DKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                             +KG IY+G Y   W  +   A  + + VYK   G +Y+ ++
Sbjct: 149 TLDDGLSEAVRKVFVTLYEKGLIYRGEYIINWDPVFQTALSDIEVVYKDDKGAFYHLEY 207


>gi|296331993|ref|ZP_06874457.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675613|ref|YP_003867285.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150764|gb|EFG91649.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413857|gb|ADM38976.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 804

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQSLGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEELDWPESIKDMQR 219



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348
           S GNV++P E++   G D LR +      L   IA  + G    DG ++           
Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFVE 636

Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376
               +N  +  G G  + R    +V  +   Y+G+
Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671


>gi|240850847|ref|YP_002972247.1| valyl-tRNA synthetase ValS [Bartonella grahamii as4aup]
 gi|240267970|gb|ACS51558.1| valyl-tRNA synthetase ValS [Bartonella grahamii as4aup]
          Length = 907

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 23/268 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I+ PD    ++  W  +     +T G+  N     + F+P+ L V G DI+     +W A
Sbjct: 473 IRDPD----VLDTWFSSALWPFSTLGW-PNKTTELSTFYPSSLSVTGFDII----FFWVA 523

Query: 278 FLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            ++   L      P P  V+ H  +   KG K+SKS GN+IDP+E+I++   DALR+ L 
Sbjct: 524 RMMMMGLHFMGDVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADALRFTLA 582

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G+D   D   +    N   A  + N  +R   M    +D       A    +  I
Sbjct: 583 IMAAQGRDVKLDASRIAGYRN--FATKLWN-ATRFAQMNGVKHDPTFKPEQAKLALNRWI 639

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
           L+  S+ +  +   +++   + + A +   +  +  D Y +  KP   +  N D  +   
Sbjct: 640 LTELSKTISAVTTGIEHYKFNESAATLYRFIWNTLCDWYLELLKP-IFQGENEDAKNEAQ 698

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDI 476
             T  V+ ++  LL  F+P +  +++ +
Sbjct: 699 ACTAWVLDEVYKLLHPFMPHMTEELWSL 726


>gi|227518203|ref|ZP_03948252.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074359|gb|EEI12322.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 880

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 431 GMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTSTLVTGYDIIFF 490

Query: 271 HA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               + + +   +   P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+
Sbjct: 491 WVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRW 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAF 383
           FL    A G+D  +  + +    N    N I N  SR V M   + +GM    I   G  
Sbjct: 550 FLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGMTAADIDFSGEK 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+  +  +  + E         A  Q+ + + +   D Y +  K   L   N 
Sbjct: 604 TVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKE-ILYGDNE 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               T   + V  + Q+  LL   +P +  +I++
Sbjct: 663 VAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGVSRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|329724727|gb|EGG61233.1| valine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 876

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADQWILTRLNETIS 616

Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              E+ +  +   + RAL   I      D Y +  K   +   +  +  T   V   V+ 
Sbjct: 617 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYVLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +   I+  L
Sbjct: 675 KIMKMLHPFMPFVTETIWQSL 695



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G  IA
Sbjct: 30 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 87

Query: 60 KAAQ 63
            A+
Sbjct: 88 TQAK 91


>gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 965

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 12/126 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+K+  DP  ++  W  +    + T G+ D  D  + K++P D+ + G+DIL F    W 
Sbjct: 527 GVKLTRDPD-VLDTWFSSGLWPIGTLGWPDQTDALE-KYFPTDVLITGQDILFF----WV 580

Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++     +  K   H   LH      KG K+SK+ GNVIDP+E+++E G DALR+ + 
Sbjct: 581 ARMMMMQQAVVDKDPFHTVYLHQLVRDEKGHKMSKTKGNVIDPLEIVDEFGADALRFTMT 640

Query: 331 REIACG 336
           +  A G
Sbjct: 641 QMAAIG 646



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   + DVL R+HR+ G D L+  G D  G  IA   Q      K+   Q     
Sbjct: 52  HVGHAFNNTLQDVLTRWHRMRGFDTLWQPGQDHAG--IATQLQ----VEKMLAGQGQPGR 105

Query: 81  RDMA 84
           RD+ 
Sbjct: 106 RDLG 109


>gi|148265162|ref|YP_001231868.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189030266|sp|A5G677|SYL_GEOUR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146398662|gb|ABQ27295.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 824

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K REK Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 30  KTREKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFKRMKGFNVLHPMGWDAFGMPAENA 89

Query: 62  A-QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           A QN     K +  +N    R     + +SY  D  + T +  ++   ++++ ++  KG 
Sbjct: 90  AIQNKSHPAK-WTYENIAYMRGQLKKMGLSYDWDRELATCDVDYYKWEQLIFLQMYKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   S  +  + E    +++V    DG  +    N V   E E + FR++ Y ++LL 
Sbjct: 149 AYKKISSVNWCPKCETVLANEQV---EDGCCWRCDSN-VDQKELEQWSFRITDYAEELLE 204

Query: 179 Y---YESHPEFILPIER 192
           Y       PE +L ++R
Sbjct: 205 YTYKLPGWPERVLTMQR 221



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 24/209 (11%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G ++  G K+SKS GNV+DP  +I++ G D  R F +      KD  +   G+   
Sbjct: 569 LLTQGMVIKDGAKMSKSKGNVVDPNALIDKYGADTARLFSLFAAPPEKDLDWSDQGVDGS 628

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 N +  LV  ++ +I     G +  P   T   + +     + ++++ E+++ + 
Sbjct: 629 FR--FLNRVWKLVYDTLPII--GGAGAL-DPAGLTNEGKGLRRQVHKTIRKVTEDIEERF 683

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A  + LV+ +  +    +P    K +P  A     V  E I  + +LL  FVP 
Sbjct: 684 HFNTAIAATMELVNTIQSF----EP----KNSPQNAP----VLKEAIESVVMLLAPFVPH 731

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGF 497
              +++  L     N+   SL+Q   P F
Sbjct: 732 FTEELWAQL---GNNK---SLEQAGWPAF 754


>gi|171910094|ref|ZP_02925564.1| valyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 887

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 41/302 (13%)

Query: 202 SGLKDLSLSRKTFDWGIKIP------------DDPQY--------IMYVWIDALTNYLTT 241
            G++D  +SR+ + WG ++P              P+         ++  W  +      T
Sbjct: 405 GGIQDWCISRQIW-WGHRVPVWYREGEVYCGETAPEGDGWTQDADVLDTWFSSWLWPFAT 463

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGF 295
            G+    +  KA F+P    V G DI+     +W A ++ A       +P  K V+  G 
Sbjct: 464 MGWPKETNDLKA-FYPTTDLVTGPDII----FFWVARMIMAGYEWMGEMPF-KNVYFTGI 517

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I  K G K+SKSLGN  DP+E+I + G DALR+ ++R    G D  +D+  ++  +  + 
Sbjct: 518 IRDKQGRKMSKSLGNSPDPLELISKFGADALRFGIMRSAPLGADVLFDEKNVE--LGRNF 575

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
              + N  +R   M     +G I  P   +  D+ IL+  S  +QE+   ++      A 
Sbjct: 576 CTKLWN-AARFRQMQGGASEGEI-KPELLSSDDKWILARLSDAIQEVTTALEEYRFSDAA 633

Query: 415 AQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A +     SE  D Y +A K   L  ++  R +  L V   V+     L   F+P +  +
Sbjct: 634 ATLYRFFWSEYCDWYVEATKA-VLNGSDEARKANTLAVMDFVLGHTLRLFHPFLPFITEE 692

Query: 473 IF 474
           ++
Sbjct: 693 LW 694


>gi|157414288|ref|YP_001485154.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388863|gb|ABV51568.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 915

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 30/297 (10%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           + K F   IK+  D   ++  W  +     +T G+ +  D    K++P  + V G DI+ 
Sbjct: 452 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNINDPDFKKWYPNSVLVTGFDIIF 510

Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           F    W A +       + N+P  K V+ HG +     +K+SKS GN IDPI +I++ G 
Sbjct: 511 F----WVARMTMMGNTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 565

Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DALR+ L+RE+A  G+D   D D  K   +  + +    N +  +   +L   +      
Sbjct: 566 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 623

Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429
            +  ESD++ L +C +     L +I   +   L    L +   L+ E       D Y + 
Sbjct: 624 YSLNESDKTSLELCDKWILSKLNQINIKVAAMLKEYKLGESAKLLYEFTWNDFCDWYVEF 683

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           A++ +  K+T   + S    V ++V+  + +++  F+P +  +++ +L +  +N   
Sbjct: 684 AKQRFNNKETKNRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNELL 738


>gi|73662410|ref|YP_301191.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|90108439|sp|Q49Y96|SYV_STAS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72494925|dbj|BAE18246.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 876

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDVEADDFQRYFPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    +   G  + +D+ IL+  +  ++
Sbjct: 559 YSTEKVESIWN--FINKIWNAARFSIMNIGEDFTVEQVDLSGDLSLADKWILTRLNETIE 616

Query: 400 EIRE 403
            + E
Sbjct: 617 NVTE 620



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 27/169 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+     
Sbjct: 38  TIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDTLYLPGMDHAGIATQAKVEAKLN 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106
             G++     D     F + A      Y +FIR                 T ++      
Sbjct: 98  EQGLSRH---DLGREKFLEQAWDWKEEYANFIRQQWAKLGLGLDYSRERFTLDEGLSKAV 154

Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           + ++  + +KG IY+G Y   W  +   A  + + +++   G++Y+ ++
Sbjct: 155 KKVFVDMYNKGLIYRGEYIINWDPIARTALSDIEVIHEDVQGKFYHFKY 203


>gi|237742952|ref|ZP_04573433.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430600|gb|EEO40812.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 887

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 18/273 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455
           +++ ++   +  A   V   +     D Y +  K   L   + D+  + L   Y+   V+
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVL 684

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            Q   LL  F+P +  +I+  + V  +    Q+
Sbjct: 685 EQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717


>gi|212638460|ref|YP_002314980.1| valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|254783550|sp|B7GH39|SYV_ANOFW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|212559940|gb|ACJ32995.1| Valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 875

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 31/196 (15%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           ++D  +SR+ + WG +IP                       +  Q ++  W  +     +
Sbjct: 398 IRDWCISRQLW-WGHRIPAWYHKETGEVYVDHEPPADIENWEQDQDVLDTWFSSALWPFS 456

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ D       +++P D+ V G DI+ F    + + A   +   P  K V  HG +  
Sbjct: 457 TMGWPDKTSADYNRYYPTDVLVTGYDIIFFWVSRMIFQALEFTGKRPF-KDVLIHGLVRD 515

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN +DP++VI++ G D+LRYFL    + G+D  +  + ++   N    N 
Sbjct: 516 AQGRKMSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLRFSTEKVEATWN--FVNK 573

Query: 358 IGNLVSRSVSMILKDY 373
           I N  SR   M ++ +
Sbjct: 574 IWN-ASRFALMNMEGF 588



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 21/166 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 38  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 97

Query: 64  NAGVT-----TKVFVDQNSRNFRDMADVLDISYD------DFIR---TTEKRHHDTCRIL 109
           N G T      + FV++  +   + A  +   +       D+ R   T ++      R +
Sbjct: 98  NEGKTRYDLGREKFVEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREV 157

Query: 110 WKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  KG IY+G Y   W  +   A  + + VYK   G  Y+ ++
Sbjct: 158 FVSLYKKGLIYRGEYIINWDPVTKTALSDIEVVYKDVQGALYHMRY 203


>gi|27468257|ref|NP_764894.1| valyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867133|ref|YP_188802.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875919|ref|ZP_06284786.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366387|ref|ZP_06613066.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81819377|sp|Q5HNN9|SYV_STAEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81843675|sp|Q8CS83|SYV_STAES RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27315803|gb|AAO04938.1|AE016748_172 valine-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637791|gb|AAW54579.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294944|gb|EFA87471.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319512|gb|EFE59879.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733785|gb|EGG70111.1| valine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737114|gb|EGG73368.1| valine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 876

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADQWILTRLNETIS 616

Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              E+ +  +   + RAL   I      D Y +  K   +   +  +  T   V   V+ 
Sbjct: 617 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYVLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +   I+  L
Sbjct: 675 KIMKMLHPFMPFVTETIWQSL 695



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G
Sbjct: 30 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 85


>gi|317495673|ref|ZP_07954038.1| valyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914126|gb|EFV35607.1| valyl-tRNA synthetase [Gemella moribillum M424]
          Length = 880

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W A ++   L  
Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 +    HG +   +G K+SKSLGN +DP+EVIE+ G D+LRYFL      G+D  
Sbjct: 502 TGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQDLR 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N  SR V M L+ ++   I   G  T +D+ IL+  ++ ++
Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLSGEKTLADKYILTKLAKTIE 618

Query: 400 E 400
           +
Sbjct: 619 D 619



 Score = 43.9 bits (102), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          +  I  PN   + HIGHA++  + D+L R+ RL G DVL+  G D           +AG+
Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
          +T+  V+   R
Sbjct: 88 STQAKVEAKMR 98


>gi|300214744|gb|ADJ79160.1| Valyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 886

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W + ++  ++  
Sbjct: 452 VLDTWFSSALWSFSTMGWPDTESPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSVEF 507

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+     V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 508 TKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 567

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +    +    N    N I N  SR V M L  D +  +P    +  +D+ ILS  +  ++
Sbjct: 568 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDSDVELSLPEASEWQLADKWILSRLNDTVR 624

Query: 400 EI 401
           ++
Sbjct: 625 DV 626



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 21/174 (12%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++E    S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 34  EDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQ 93

Query: 56  QKIAKAAQNAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKR 101
            K+       G++      + FV++      + AD+         L + YD    T +  
Sbjct: 94  AKVEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
                R ++  +  KG IY+G Y   +  +     +D EV +K   G +Y+ ++
Sbjct: 154 LSKAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDDKGAFYHVKY 207


>gi|261418346|ref|YP_003252028.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767695|ref|YP_004133196.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374803|gb|ACX77546.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112561|gb|ADU95053.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 880

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 47/309 (15%)

Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239
           ++D  +SR+ + WG +IP                         DP  ++  W  +     
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ D       +++P D+ V G DI+ F    + +     +   P  K V  HG + 
Sbjct: 461 STMGWPDVESPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN
Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577

Query: 357 GIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            I N    +    L +  GM    +   G  T +D  IL+  +  ++ + +  +      
Sbjct: 578 KIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGE 633

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468
           A   + + + +   D Y +  K   L     D A+  T   V   V+     LL  F+P 
Sbjct: 634 AGRTLYNFIWDDLCDWYIEMAK---LPLYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPF 690

Query: 469 LANKIFDIL 477
           +  +I+  L
Sbjct: 691 ITEEIWQNL 699



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++            T  + ++ + + R     L +   D+ R   T ++      R 
Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  +  KG IY+G Y   W  +   A  + + VYK   G  Y+ ++
Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRY 208


>gi|319400980|gb|EFV89199.1| valyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 876

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEDFKVEDIDLSGNLSLADQWILTRLNETIS 616

Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              E+ +  +   + RAL   I      D Y +  K   +   +  +  T   V   V+ 
Sbjct: 617 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNDEDESQKQTTRSVLSYVLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +   I+  L
Sbjct: 675 KIMKMLHPFMPFVTETIWQSL 695



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G  IA
Sbjct: 30 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 87

Query: 60 KAAQ 63
            A+
Sbjct: 88 TQAK 91


>gi|241889659|ref|ZP_04776957.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863281|gb|EER67665.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 880

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W A ++   L  
Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 +    HG +   +G K+SKSLGN +DP+EVIE+ G D+LRYFL      G+D  
Sbjct: 502 TGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQDLR 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N  SR V M L+ ++   I   G  T +D+ IL+  ++ ++
Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLTGEKTLADKYILTKLAKTIE 618

Query: 400 E 400
           +
Sbjct: 619 D 619



 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          +  I  PN   + HIGHA++  + D+L R+ RL G DVL+  G D           +AG+
Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
          +T+  V+   R
Sbjct: 88 STQAKVEAKMR 98


>gi|221633223|ref|YP_002522448.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155678|gb|ACM04805.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 829

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 37/240 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHK- 299
           D  K  +W P D +  G +    H +Y   W   L    L   +    ++F+HG IL + 
Sbjct: 528 DPEKVAYWTPVDQYTGGIEHAILHLLYSRFWTKALADLGLVNHREPFLRLFNHGVILGED 587

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNV+DP +++  +G D +R +L+      + G +   G+          G+ 
Sbjct: 588 GEKMSKSRGNVVDPDDLVARLGADTVRLYLMFIGPWSQGGPWSSRGVA---------GVQ 638

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R  +++ +  D  +P   A  E   ++  +  R ++ + ++ +    + A+A+++ 
Sbjct: 639 RFLQRVWALVTETLD--VPVDTAEDEQARALRRLVHRTIKHVTDDFETFSFNTAIARMME 696

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV--EVIRQLAILLQAFVPKLANKIFDIL 477
           LV+E+ R                R +TV+ + V  E +  L +LL    P LA +++  L
Sbjct: 697 LVNELSRL---------------RETTVVRMPVWREALETLVLLLAPGAPHLAEELWQRL 741



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 11/194 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+   HIGH +    AD  AR+ R+ G +VLF  G D  G     AA 
Sbjct: 41  RPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGYNVLFPFGFDAFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+  +V+  QN     +  R +  + D S +  + T    ++   +  + +   +G  
Sbjct: 101 KHGIHPRVWTMQNIAHMKKQLRSLGGMFDWSKE--VITCLPEYYRWNQWFFLQFYKRGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+     W+    +    +++V  G   +     +      + E +F R++AY ++LL +
Sbjct: 159 YRAKAPVWWCPTCQTVLANEQVIDGRCERCSTEVYR----RDLEQWFLRITAYAEELLRF 214

Query: 180 YE-SHPEFILPIER 192
                PE ++ ++R
Sbjct: 215 DGIDWPERVITMQR 228


>gi|135181|sp|P11931|SYV_BACST RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|143797|gb|AAA22879.1| valyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 880

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 15/186 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLL 280
           DP  ++  W  +     +T G+ D       +++P D+ V G DI+ F    + +     
Sbjct: 445 DPD-VLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEF 503

Query: 281 SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  K V  HG +   +G K+SKSLGN +DP++VI++ G DALRYFL    + G+D 
Sbjct: 504 TGKRPF-KDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDL 562

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCS 395
            +  + ++   N   AN I N    +    L +  GM    +   G  T +D  IL+  +
Sbjct: 563 RFSTEKVEATWN--FANKIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLN 616

Query: 396 RVLQEI 401
             ++ +
Sbjct: 617 ETIETV 622



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++            T  + ++ + + R     L +   D+ R   T ++      R 
Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  +  KG IY+G Y   W  +   A  + + VYK   G  Y+ ++
Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHMRY 208


>gi|146279117|ref|YP_001169276.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557358|gb|ABP71971.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 987

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 35/192 (18%)

Query: 167 FRLSAYQDKLLSYYESHPE-----FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           F   A  +K L    S P       ++ +  R E +  +   L D ++S           
Sbjct: 494 FDFDAVSEKFLDDLASLPAPLNHARVVEVANRAEAVDRLAQALADYNVS----------- 542

Query: 222 DDPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHA 272
           +DP +++Y VW D        ++ L   G L  P+ +    +++P ++ + G DI+    
Sbjct: 543 EDPTHLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEDTDELRRYFPTNVLITGFDII---- 598

Query: 273 IYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            +W A ++   L +      K V+ H  +   KG+K+SKSLGNV+DP+E+I+E G DA+R
Sbjct: 599 FFWVARMMMMQLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVR 658

Query: 327 YFLVREIACGKD 338
           + L    A G+D
Sbjct: 659 FTLTAMAAMGRD 670



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 8/51 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQ 63
           H+GHA+   + D+L R+HR+ G D L+  G D  G        +++AKA Q
Sbjct: 52  HMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVERELAKAGQ 102


>gi|329767449|ref|ZP_08258974.1| valyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836138|gb|EGF85829.1| valyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 880

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W A ++   L  
Sbjct: 446 VLDTWYSSALFPFSTLGWPDLESEDFKRYYPNSCLVTGYDIIFF----WVARMVFQGLEF 501

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 +    HG +   +G K+SKSLGN +DP+EVIE+ G D+LRYFL      G+D  
Sbjct: 502 TGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIEQYGADSLRYFLATNSTPGQDLR 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N  SR V M L+ ++   I   G  T +D+ IL+  ++ ++
Sbjct: 562 YSTEKIEASWN--YINKIWN-ASRFVIMNLEGFEYSDIDLTGEKTLADKYILTKLAKTIE 618

Query: 400 E 400
           +
Sbjct: 619 D 619



 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          +  I  PN   + HIGHA++  + D+L R+ RL G DVL+  G D           +AG+
Sbjct: 39 TIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
          +T+  V+   R
Sbjct: 88 STQAKVEAKMR 98


>gi|310777973|ref|YP_003966306.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747296|gb|ADO81958.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 869

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 8/185 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+   + YP+ + H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLEMLPYPSGKLHMGHVRNYTIGDVIARYKKMKGYNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    V+   N  N       L  SY  D  I +    ++   + ++K++ +KG +YK
Sbjct: 92  QNGAHPAVWTKSNIENMTTQLKSLGFSYDWDREIASYRDDYYRWNQWIFKRMYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +    +    +++V    DG+ +      V   E E ++F+++ Y D+LL   E
Sbjct: 152 KKSSVNWCPDCQTVLANEQV---EDGKCWRHSKTDVIQKELEQWYFKITNYADELL---E 205

Query: 182 SHPEF 186
            H E 
Sbjct: 206 GHKEL 210



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 13/180 (7%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP  ++   G D  R F +      K+  ++++GL         N +
Sbjct: 618 KVEKMSKSKNNGVDPENIVATYGADTARLFTMFASPPEKELEWNENGLAGSYR--FLNRV 675

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
             +VS S +     ++          ++D++IL    + ++++ E+++N    + ++A  
Sbjct: 676 WRMVSESKAF----FEAGSINLENLNKADKAILRKLHQTIKKVTESIENDYHFNTSIASN 731

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++E+  Y    K   L+K +    S  L+   E + ++ I+L  FVP + ++++  L
Sbjct: 732 MELINELQDY----KVNVLEKGDITSESKKLF--TEAVNKMVIMLSPFVPHICDELWSEL 785


>gi|256846924|ref|ZP_05552378.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717722|gb|EEU31281.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 887

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 18/273 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455
           +++ ++   +  A   V   +     D Y +  K   L   + D+  + L   Y+   V+
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVL 684

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            Q   LL  F+P +  +I+  + V  +    Q+
Sbjct: 685 EQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717


>gi|209522637|ref|ZP_03271195.1| valyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496686|gb|EDZ96983.1| valyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 908

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 27/292 (9%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFH 271
           +F  G+K+  DP  ++  W  +     +T G+ +  PD     ++P +    G DI+ F 
Sbjct: 453 SFGEGVKLQQDPD-VLDTWFSSGLWPFSTLGWPEKTPD--LQTYYPTNTLSTGFDIIFF- 508

Query: 272 AIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
              W A +       +  +P  + V+ HG IL   G+K+SKS GN IDP+ +I++ G DA
Sbjct: 509 ---WVARMTMMGGYFTDQMPF-QTVYIHGLILDENGKKMSKSAGNGIDPLLLIDKYGTDA 564

Query: 325 LRYFLVRE-IACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP---- 378
           LRY L+RE I  G+D   + D  K +  + + +    N +  +   +L +  G  P    
Sbjct: 565 LRYTLMREVIGAGQDIRLEYDRSKDESPSVEASRNFTNKLWNAARFVLMNLKGQTPAQLG 624

Query: 379 TPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
           TP       SD  ILS  ++ +++  + M    +  A   +   +     D Y +  K +
Sbjct: 625 TPNLEELELSDRWILSRFNQTVKQTCDYMNAYSLGEAAKGLYEFIWGDFCDWYIELAK-Y 683

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            L+            V   ++  +  LL  F+P +  +I+  L    E  C 
Sbjct: 684 RLQGDGGVSQKVAQQVLAYILEGILKLLHPFMPHITEEIWHTLTQTGEQDCL 735



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+   + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFNNSLIDALIRYHRMRGYNTLYLPGTD 87


>gi|269861726|ref|XP_002650553.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220065964|gb|EED43501.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 114

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 1/101 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
               T +  V +N    +++ D  ++ +D F  T   +HH+
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTXXHKHHE 110


>gi|218441136|ref|YP_002379465.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218173864|gb|ACK72597.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 909

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 30/291 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  +++ +   I++  DP  ++  W  +     +T G+ +     K  ++P    V G D
Sbjct: 447 LKTAKQQYGDNIQLSQDPD-VLDTWFSSGLWPFSTMGWPEETTDLKT-YYPTSTLVTGFD 504

Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    +   A   +  +P  K V+ HG +    G+K+SKS  N IDP+ +IE+ G D
Sbjct: 505 IIFFWVARMTMMAGYFTGQMPF-KDVYIHGLVRDENGKKMSKSANNGIDPLILIEKYGAD 563

Query: 324 ALRYFLVREIA-CGKDGF--YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           ALRY L+RE+A  G+D    YD+    +  + + +    N +  +   ++ + DG  P  
Sbjct: 564 ALRYTLIREVAGAGQDISLQYDRTS-DQSESVEASRNFANKLWNAARFVMMNLDGKTPQE 622

Query: 381 GAFTESDESILSVCSRVL----QEIRENMQNQLIHRALAQVISLVSE------VDRYFDA 430
                 DE  L +C R +     ++ +  +N + H  L +    + E       D Y + 
Sbjct: 623 LGNPSLDE--LELCDRWILSRFNQVVQQTRNYIDHYGLGEAAKGLYEFIWGDFCDWYIEL 680

Query: 431 QKPW----ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K      EL  +      T+ +V   +++    LL  F+P +  +I+ IL
Sbjct: 681 VKSRLFNKELSSSRIVAQQTLAFVLDGILK----LLHPFMPHITEEIWQIL 727


>gi|299144490|ref|ZP_07037569.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517578|gb|EFI41318.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 883

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 143/339 (42%), Gaps = 49/339 (14%)

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
           L +YY+    F+   ER  +V       +KD  +SR+ + WG ++P              
Sbjct: 373 LQAYYDGKLNFVP--ERFAKVYVNWLENIKDWCISRQLW-WGHRLPVFYCVETGEVVVSR 429

Query: 222 ----DDPQY----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                 P Y           +  W  +     +T G+ +  +  K  F+P D+ V G DI
Sbjct: 430 TDPTGSPGYENKTFKQDEDTLDTWFSSALWPFSTLGWPEQTEDLKY-FYPTDVLVTGYDI 488

Query: 268 LRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F  I      L     +P K VF  G +   +G K+SKSLGN IDP+E+I+  G DAL
Sbjct: 489 IFFWVIRMVFSALEDMGEVPFKDVFFTGLVRDSQGRKMSKSLGNGIDPLEIIDNYGADAL 548

Query: 326 RYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAF 383
           R+ L+     G D  FY++   +   N + AN + N  +R V M L D          + 
Sbjct: 549 RFTLISGNTPGNDMRFYNE---RVEANRNFANKLWN-ATRFVLMNLDDEKSEYKLNIDSL 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP---WELKK 438
              D+ ILS    ++ ++   +    +  A  ++   +     D Y +  KP    E  K
Sbjct: 605 KNEDKWILSKLQNLIADVTIKLDKYDMGLAAQEIYDFIWSDYCDWYIEMVKPRLYGEDNK 664

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 + +LYV  ++++    LL  F+P +  +I+  L
Sbjct: 665 YKESAKAVLLYVLKDILK----LLHPFMPYITEEIWQHL 699


>gi|118580003|ref|YP_901253.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502713|gb|ABK99195.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 886

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 146/351 (41%), Gaps = 49/351 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ ++    ++ L   +     ILP +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WYVKVGPLAERALQAVKEGKTRILPKQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWF 419

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP                ++  W  +     +T G+ D       +F+
Sbjct: 420 CDHCGGVTVAMEDPTSCSACGSDEIHQETDVLDTWFSSALWPFSTMGWPDKTP-ELERFY 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNV 310
           P    V G DIL F    W A ++   L    +V      +H       G+K+SKS GNV
Sbjct: 479 PTSCLVTGFDILFF----WVARMMMMGLHFMDQVPFTDVYIHALVRDAHGQKMSKSKGNV 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ +I++ G DA R+ L    A G+D    ++ +    N    N + N  +R   M L
Sbjct: 535 IDPLTIIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FCNKVWN-AARFTLMNL 591

Query: 371 K--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
              D DG+     + +  D+ IL   +   + + E++     + + + +     SE  D 
Sbjct: 592 DGFDPDGITLGELSLSAGDKWILHRLNETARLVDESLTGYRYNESASALYQFTWSEFCDW 651

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K  +L    P+R  T  YV    +  L  LL  F+P +  +I+  L
Sbjct: 652 YLELSKQ-DLYNGTPERKKTSQYVLWYTLDHLLRLLHPFMPFITEEIWQAL 701


>gi|254780802|ref|YP_003065215.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040479|gb|ACT57275.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 869

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 21/178 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NVIDP++VI+  G D  R F++ +    +D  +   G+           I  
Sbjct: 629 EKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPPDRDIIWSNKGVDS--TYQFIQQIWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+          Y+       + T+ D S++S  ++ L+ I EN QN   ++A+A +  L
Sbjct: 687 LI----------YNAKDELQTSSTKKDISLISKSTKFLERIEENYQNLSFNKAVANIHEL 736

Query: 421 VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ + +   +  K    KK+N DR ST+ Y    ++ +L I++   +P LA + + +L
Sbjct: 737 VNVISKPLMEIAK----KKSNADRISTIRY----ILEKLIIMMSPMIPHLAEECWQLL 786



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 8/188 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K ++     YP+   H+GH    +I DV+ARF R  G  VL   G D  G     A
Sbjct: 31  KNKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A+   V  K++  QN +  R     + +S D   DF       +H    +    +     
Sbjct: 91  AREHNVHPKMWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVI 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           + K     W  +      N+  +    +G+ + +   PV+      +FF++S    +LL 
Sbjct: 151 VRKTAQVNWDPVEQTVLANEQVI----NGRGWRSDA-PVEQRSLPQWFFKISDLSQELLD 205

Query: 179 YYESHPEF 186
             E+  E+
Sbjct: 206 SIETLSEW 213


>gi|325095042|gb|EGC48352.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 964

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G+    +  QN  N ++    +   +D   + +  + + +  T RI    +  +G  Y
Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSSEFYKHTQRIF-LMLYQEGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKARVNYDPIDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDL 238

Query: 181 ES----HPEFILPIER 192
           ES     PE +L +++
Sbjct: 239 ESLEAGWPERVLSMQK 254


>gi|315231914|ref|YP_004072350.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315184942|gb|ADT85127.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 1065

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 130/265 (49%), Gaps = 12/265 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLLSANLP 285
           ++ VW D+      + GY    +  + K WPAD  V G+D + ++      A +++ +  
Sbjct: 549 VLDVWFDSGIASWASLGYPREKELFE-KLWPADFIVEGEDQVTKWFYSQQAASVIAFDTV 607

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             + V  HG++L  KG+K+SKSLGN+I P EV+++ G DA R++++      ++  +   
Sbjct: 608 PYRHVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDAFRFYMLWATTPWENLRFSWK 667

Query: 345 GLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           GL   KR+   L N +  L +  +S+   +   + P    F E D+ +LS  + +++ + 
Sbjct: 668 GLAQVKRMLNILWN-VYILAATYMSLDKFEPGKVNPEELPFREEDKWVLSRVNSLVETVT 726

Query: 403 ENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             ++   + RA   +   V E + R++     ++ W ++  +PD+ +   +   +V   L
Sbjct: 727 NGIETFYLTRATRGIYDFVVEDLSRWYVRLIRKRLW-VEGDDPDKLAA-YWTLWKVFDVL 784

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             L+  F P +A  I+  +    E+
Sbjct: 785 LRLMAPFTPYIAEAIYQNMIARKES 809



 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I  K  Q 
Sbjct: 41  KYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQA 100

Query: 65  AG------VTTKVFVDQNSRNFRDMA 84
            G      +  K+ VD   +  R+ A
Sbjct: 101 LGLKIKKDIEEKIGVDNFIKKCREFA 126


>gi|219846966|ref|YP_002461399.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541225|gb|ACL22963.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 922

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 24/204 (11%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G++ PD    ++  W  +     +T G+ D+ D  + +F+P  +   G DIL F    W 
Sbjct: 462 GVQDPD----VLDTWFSSGLWPFSTLGWPDDTDDYR-RFYPTSVMETGYDILFF----WV 512

Query: 277 AFLLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++         P    V+ HG +  + G K+SKS GNV++P+EV+E+ G DALRY LV
Sbjct: 513 ARMMMMGCYLTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVNPLEVVEQYGSDALRYTLV 572

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTP-----GAF 383
                G+D   +   ++   N   AN I N+    +  +  L   D +  TP       F
Sbjct: 573 TSGTPGQDVNLNPQRIEAARN--FANKIWNITRFVIGKLGDLPRTDSVKITPEILHREEF 630

Query: 384 TESDESILSVCSRVLQEIRENMQN 407
           T +D  ILS  + ++ E+   M+ 
Sbjct: 631 TLADRWILSRYAYLVAEVDRLMEG 654



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 24/152 (15%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65
           +I  PN   + H+GHA  + I D++ R+ R+ G   L+  GTD  G     ++ K  +  
Sbjct: 49  SIPPPNVTGELHLGHAMFVAIEDLMIRWRRMQGYQTLWVPGTDHAGIATQTQVEKLLERE 108

Query: 66  GVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           G + +                 +  + +R  R +    D S + F  T +          
Sbjct: 109 GTSRQAVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWSRERF--TLDPGLSRAVHTA 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +K++ D G IY+G Y   +S + +   +D EV
Sbjct: 167 FKRLYDDGLIYRGIYLVNWSPKLQTAVSDLEV 198


>gi|81428459|ref|YP_395459.1| valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|90101528|sp|Q38XD1|SYV_LACSS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|78610101|emb|CAI55150.1| Valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 882

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P +  V G DI+ F    W + ++  +L  
Sbjct: 447 VLDTWFSSALWPFSTMGWPNTEAPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSLEF 502

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++     V  HG I   +G K+SKSLGN IDP+EVIE+ G DALR+FL      G+D  
Sbjct: 503 TEQRPFEHVLIHGLIRDEQGRKMSKSLGNGIDPMEVIEKYGADALRWFLTSGSTPGQDVR 562

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVL 398
           +    +    N    N I N  SR V M L+D      +P       +D+ ILS  ++ +
Sbjct: 563 FSYTKMDAAWN--FINKIWN-ASRFVIMNLEDTPAPTKVPEAANLDLTDKWILSQLNQTV 619

Query: 399 QEI 401
            ++
Sbjct: 620 ADV 622



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G     K+     
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDVLWLPGMDHAGIATQAKVEAKLA 101

Query: 64  NAGVT-----TKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+DQ               +  M   LD S + F  T +    D  R
Sbjct: 102 EQGISRYDLGREKFIDQVWEWKDEYAATIHDQWAKMGLSLDYSRERF--TLDDGLSDAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +KG IY+G Y   +  +     +D EV ++  +G +Y+  +
Sbjct: 160 KVFVNLYNKGLIYRGEYIINWDPKARTALSDIEVLHQDDEGAFYHVSY 207


>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 930

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 7/106 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++L     LD  +      WPADL++ G D  R  F++    +  +++  
Sbjct: 525 IMDVWFDSGSSHLAV---LDQKELWPDLHWPADLYLEGSDQHRGWFNSSLSTSVAVTSKP 581

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HGF++  KG K+SKSLGNV+DP++VI ++G D LR ++
Sbjct: 582 PY-KAVLTHGFVVDEKGRKMSKSLGNVVDPLKVINQMGADILRLWV 626



 Score = 37.0 bits (84), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I + A
Sbjct: 58  YANGHIHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGWDTHGLPIEQQA 105


>gi|225554709|gb|EEH03004.1| leucyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 965

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVL+RF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHLGHVRVYTISDVLSRFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G+    +  QN  N ++    +   +D   + +  + + +  T RI    +  +G  Y
Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIF-LMLYQEGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKARVNYDPIDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDL 238

Query: 181 ES----HPEFILPIER 192
           ES     PE +L ++R
Sbjct: 239 ESLEAGWPERVLSMQR 254


>gi|260435463|ref|ZP_05789433.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413337|gb|EEX06633.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 914

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    +   A   +  +
Sbjct: 461 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  + V+ HG +   +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D
Sbjct: 521 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 579

Query: 343 KDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D  K      + +    N +  +    L +     PT      P A   +D  ILS  +
Sbjct: 580 YDRKKDTSATVEASRNFANKLWNATRFALMNLGSETPTQLGESDPAALQLADRWILSRLA 639

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446
           RV +E  +   +  +  A   +         D Y +  K    ++ NP    +       
Sbjct: 640 RVNRETAQRYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 695

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474
                V  +VI Q+ ++L   +P L  +++
Sbjct: 696 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 725


>gi|269864707|ref|XP_002651669.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220064101|gb|EED42387.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 404

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 44/311 (14%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           ++ ADV +RF R  G DV++ +GTDE+G  I   A+    T +  V +N    +++ D  
Sbjct: 37  LLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAEKQNTTPEQIVQKNRVLHKEVYDFF 96

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGD--------------------IYKGCYSGW 127
           ++ +D F  T   +HH+  + ++ K  D  D                    I   C  G 
Sbjct: 97  NLDFDYFGHTCTTKHHELVQNIFLKTIDHFDEKEINQMFCPKCKQFLADRYIEGECACGA 156

Query: 128 YSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            +  D+      Y+ D +  +  + +    +  P Q    +  FF L    ++L  Y+++
Sbjct: 157 TTHGDQCDTCGRYHEDSQ--ELTNFRCSICKTTP-QIKTTKQLFFNL----NELQHYFQT 209

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGIKIP----DDPQYIMYVWIDALTN 237
                     R    +++K  L    ++RK    WG+ +P    DD   + YVW DA   
Sbjct: 210 MDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPLKEYDDK--VFYVWYDAPIG 267

Query: 238 YLT-TTGYLDNPDGSKAKF-WPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           YL+     L++  G+   F W      +  +GKD + FH+I +P  L +      K + S
Sbjct: 268 YLSFLQQKLESDQGTSDVFEWLKGSKWVLFMGKDNVPFHSIIFPCILYALKEYSVKPIQS 327

Query: 293 HGFILHKGEKI 303
              I+ + EKI
Sbjct: 328 ENSIVEQIEKI 338


>gi|313897678|ref|ZP_07831220.1| valine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957630|gb|EFR39256.1| valine--tRNA ligase [Clostridium sp. HGF2]
          Length = 874

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 39/234 (16%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY---------IMYVWIDALTNYL 239
            ++D  +SR+ + WG +IP              +DPQ          ++  W  +     
Sbjct: 399 NIEDWCISRQLW-WGHRIPAWYHKETGEIYVGMEDPQDLENWIQDEDVLDTWFSSALWPF 457

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSH 293
           +T G+    D    +++P D+ V G DI+ F    W A +         N P  K V  H
Sbjct: 458 STLGWPKETDDLN-RYFPNDVLVTGYDIIFF----WVARMAFQTRYCMKNRPF-KDVLIH 511

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +   +G K+SKSLGN IDP++VI + GVDALR+FL      G+D  Y  +  K   +A
Sbjct: 512 GLVRDAQGRKMSKSLGNGIDPMDVIADHGVDALRFFLTTNSTPGQDLRYIDE--KVEASA 569

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +  N I N     +  I +D +         +  D+ IL   + VL+ +  NM+
Sbjct: 570 NFINKIWNASRFVLMQIPEDMEVSDIDLSNASMIDKWILKRFNEVLENVTANME 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 22/133 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  + D+++R+ R+ G D+L+  G D           +AG+ T+  VD+  ++ 
Sbjct: 52  HLGHAWDTTLQDIVSRYKRMQGYDMLWLPGMD-----------HAGIATQAKVDERLKS- 99

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA--- 134
            +     DI  + F+      ++ +  T R  W K+    D  +  ++    L D     
Sbjct: 100 -EGISRYDIGREKFLERAWEWKEEYASTIRKQWAKMGLSLDYSRERFTLDEGLSDAVRRV 158

Query: 135 ---YYNDDEVYKG 144
               YND  +Y+G
Sbjct: 159 FVDLYNDGLIYQG 171


>gi|229074897|ref|ZP_04207906.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228708234|gb|EEL60398.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 1033

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  +       A  ++ +LV EV  ++      + WE    N ++AS   Y T+ EV+ 
Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDVVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|242277727|ref|YP_002989856.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242120621|gb|ACS78317.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 884

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 58/316 (18%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP              + ++  W  + 
Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCEDCGELIVANEDPTKCTKCGSSKLIQEEDVLDTWFSSA 458

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
               +T G+ D      AK++P  + + G DIL F    W A ++   +    ++  H  
Sbjct: 459 LWPFSTLGWPDETP-ELAKYYPTSVLITGFDILFF----WVARMMMMGIHFQDQIPFHHV 513

Query: 296 ILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DGL 346
            +H       G+K+SKS GNVIDP+E+ ++ G DALR+ L    A G+D    +   +G 
Sbjct: 514 YIHALVRDEHGKKMSKSTGNVIDPLEMSDKYGTDALRFTLTSFAAMGRDIKLSEQRIEGY 573

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRVLQEIRE 403
           +  VN          +  S    L + DG  P      A   ++E IL     V   +RE
Sbjct: 574 RHFVNK---------IWNSARFALMNLDGKKPEAALEDASGLANEWILHRLEEVKDTMRE 624

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +++   +     +   +     D Y +  KP +L   +  R    L V   V+ +  +L
Sbjct: 625 AVESYRFNEVAQTMYKFIWNEFCDWYLEMIKP-DLYSDDETRKGATLKVLWTVLSETMVL 683

Query: 462 LQAFVPKLANKIFDIL 477
           L   +P +  +++ +L
Sbjct: 684 LHPVMPFVTQEVWSVL 699



 Score = 43.9 bits (102), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 25/168 (14%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA  + + D+L R+ R  G +VL+  GTD  G       +    
Sbjct: 41  SIVIPPPNVTGVLHMGHALNITLQDILCRYQRQQGKNVLWVPGTDHAGIATQNVVERQLK 100

Query: 68  TTKVFVDQNSR--------------------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           T     D   R                      R M   +D   + F  T + +     R
Sbjct: 101 TEGKTRDDLGREKFIERVWEWKEEKGGHILKQIRRMGASVDWDRECF--TFDDQRAKAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++ ++G IYKG Y   +  R      DDEV +    G +YN ++
Sbjct: 159 KVFVQLYEEGLIYKGNYIINWCNRCHTALADDEVEHSPKPGHFYNIKY 206


>gi|295397317|ref|ZP_06807409.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974391|gb|EFG50126.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 887

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 28/200 (14%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 439 GMEAPADSENWEQDPDVLDTWFSSALWPFSTMGWPDTDAEDFKRYYPTSTLVTGYDIIFF 498

Query: 271 HAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W A ++   L        K V  HG I   +G K+SKSLGN +DP++V+ E G DA
Sbjct: 499 ----WVARMIFQGLEFTGRRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMDVVNEYGADA 554

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGM------ 376
           LR+FL      G+D  Y+++ L+   N    N I N  SR   M L D  YD +      
Sbjct: 555 LRWFLATGSTPGQDIRYNEEKLEAAWN--FINKIWN-ASRYAIMNLDDLTYDEIDLSNVN 611

Query: 377 -IPTPGAFTESDESILSVCS 395
            I      T  +E+I SV +
Sbjct: 612 EIKDQWILTRLNETIASVTA 631


>gi|254525794|ref|ZP_05137846.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537218|gb|EEE39671.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 915

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 137/297 (46%), Gaps = 30/297 (10%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           + K F   IK+  D   ++  W  +     +T G+ +  D    K++P  + V G DI+ 
Sbjct: 452 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNINDLDFKKWYPNSVLVTGFDIIF 510

Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           F    W A +       + N+P  K V+ HG +     +K+SKS GN IDPI +I++ G 
Sbjct: 511 F----WVARMTMMGNTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPILLIDKYGS 565

Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DALR+ L+RE+A  G+D   D D  K   +  + +    N +  +   +L   +      
Sbjct: 566 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 623

Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429
            +  ESDE+ L +C +     L +I   +   L    L +   L+ E       D Y + 
Sbjct: 624 DSLNESDENSLELCDKWILSKLNQINIKVAALLKEYKLGESAKLLYEFTWNDFCDWYVEF 683

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           A++ +  K+T   + S    V ++V+  + +++  F+P +  +++ +L +  +N   
Sbjct: 684 AKQRFNNKETINRQISE--KVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNELL 738



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----KAAQNAGVTTK 70
           H+GHA+   + DV+ RF RL G +VL   GTD     +     K  +N G T++
Sbjct: 54  HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTILEKQLKNEGKTSE 107


>gi|23099516|ref|NP_692982.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746073|sp|Q8EPN2|SYV_OCEIH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22777745|dbj|BAC14017.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 883

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 15/259 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P ++ V G DI+ F   +    +  +   +
Sbjct: 452 VLDTWFSSALWPFSTMGWPNEDSADLKRYFPTNVLVTGYDIIFF---WVSRMIFQSKEFM 508

Query: 287 PKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +K F     HG I    G K+SKSLGN +DP++VIE+ G D+LRYFL+     G+D  +
Sbjct: 509 NEKPFEDTLLHGLIRDADGRKMSKSLGNGVDPMDVIEKYGADSLRYFLMTGSTPGQDLRF 568

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
             + ++   N   AN + N  SR   M ++ +    I   G  +  D  IL+  +  +++
Sbjct: 569 HWEKVESTWN--FANKVWN-ASRFSIMNMEGFTYEDIDLTGELSLPDRWILARLNETIEQ 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +  N        A   + + + +   D Y +  K   L   + ++  T   V   V+ Q 
Sbjct: 626 VTRNSNKYEFGEAGRHLYNFIWDEFCDWYIEMAKL-SLYGEDENKKKTTRSVLAHVLDQT 684

Query: 459 AILLQAFVPKLANKIFDIL 477
             +L  F+P +  +I+  L
Sbjct: 685 MRMLHPFMPFITEEIWQQL 703



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D + R  R+ G DVL+  G D  G      A  A V
Sbjct: 46  SIVIPPPNVTGRLHLGHAWDTSMQDTITRMKRMQGYDVLWLPGMDHAG-----IATQAKV 100

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             ++     +R       F + A      Y  FIR                 T ++   D
Sbjct: 101 EARLKESGTNRYELGREKFLEKAWEWKEEYAAFIRSQWEKLGLGLDYSRERFTLDEGLSD 160

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W      A  + + +Y+   G++Y+ ++
Sbjct: 161 AVREVFVKLYEKGLIYRGEYIINWDPSTKTALSDIEVIYEEIQGKFYHMRY 211


>gi|254423093|ref|ZP_05036811.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190582|gb|EDX85546.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 1130

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 123/293 (41%), Gaps = 38/293 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I++  DP  ++  W  +    ++T G+ +        ++P    V G DI+ F    W A
Sbjct: 465 IQLKQDPD-VLDTWFSSGLWPMSTLGWPNTSTPDYQFYYPTQTLVTGFDIIFF----WVA 519

Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       +  +P    V+ HG +     +K+SKS GN IDP+ +I++ G DALRY LV
Sbjct: 520 RMTLMAGHFTGKMPF-DTVYIHGLVRDENNQKMSKSKGNGIDPLVLIDKYGTDALRYTLV 578

Query: 331 REIA-CGKDGFYDKDGLKKRVNA-----DLANGIGNLVSRSVSMILKDYD----GMIPTP 380
           RE+A  G+D   D D      +A     +  N + N  SR V M L        GM  T 
Sbjct: 579 REVAGAGQDIRLDYDRQTDESSAVEASRNFTNKLWN-ASRFVMMNLGGQSPSGLGMPGTA 637

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP----- 433
           G    +DE ILS   +     R  +    +  A  ++         D Y +  KP     
Sbjct: 638 GPLELADEWILSKFHQAAGRSRTYLDKYGLGEAAKELYDFTRGDFCDWYIELVKPRLYGE 697

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            E K+T     + VL  T++       LL  F+P +  +++  L    E  C 
Sbjct: 698 GETKRTAQQTLAYVLEGTLK-------LLHPFMPHITEELWHTLTGVGEEDCL 743



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          HIGHA+E  + D + R+ R+ G + L+  GTD
Sbjct: 62 HIGHAFEQALIDTVVRYQRMKGKNTLYLPGTD 93


>gi|90962047|ref|YP_535963.1| valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|90821241|gb|ABD99880.1| Valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 886

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W + ++  ++  
Sbjct: 452 VLDTWFSSALWPFSTMGWPDTESPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSVEF 507

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+     V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 508 TKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 567

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +    +    N    N I N  SR V M L  D +  +P    +  +D+ ILS  +  ++
Sbjct: 568 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDSDVELSLPEASEWQLADKWILSRLNDTVR 624

Query: 400 EI 401
           ++
Sbjct: 625 DV 626



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 21/174 (12%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++E    S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 34  EDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQ 93

Query: 56  QKIAKAAQNAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKR 101
            K+       G++      + FV++      + AD+         L + YD    T +  
Sbjct: 94  AKVEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
                R ++  +  KG IY+G Y   +  +     +D EV +K   G +Y+ ++
Sbjct: 154 LSKAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDDKGAFYHVKY 207


>gi|118580151|ref|YP_901401.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231626|sp|A1APS3|SYL_PELPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118502861|gb|ABK99343.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 823

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA
Sbjct: 31  DRPKYYLLEMFPYPSGRIHMGHVRNYSIGDVIGRFKRMRGFNVLHPMGWDAFGMPAENAA 90

Query: 63  -QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
            QN     K +  +N    R     + +SYD    + T +  ++   + ++ ++  KG  
Sbjct: 91  IQNKSHPAK-WTYENIDYMRGQLKKMGLSYDWGRELATCDLEYYRWEQKIFLEMFAKGLA 149

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K  Y  W    +    N+    +  DG  +    +PVQ  E + +FFR++ Y ++LLS
Sbjct: 150 YKKTSYVNWCPTCETVLANE----QVEDGACWRCD-SPVQQKELDQWFFRITQYAEELLS 204

Query: 179 YYESHP 184
           Y E  P
Sbjct: 205 YTEKLP 210



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 23/188 (12%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G ++  G K+SKS GNV+DP  +IE  G D  R F +      KD  ++  G+   
Sbjct: 569 LLTQGMVIKDGAKMSKSKGNVVDPNALIERYGADTARLFSLFAAPPEKDLDWNDQGVDGS 628

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQN 407
                 N +  LV+  + +I     G  P   PG  T  + ++     + ++++ E+++ 
Sbjct: 629 FR--FLNRVWKLVNDRLELI----SGAAPLDVPG-LTGEERTLRRAVHKTIRKVTEDIEG 681

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L++ V +  D   P         +A  V+    E +  L +LL  FV
Sbjct: 682 RFHFNTAIAAVMELLN-VLQSADLSTP---------QAGAVMK---EALESLVLLLAPFV 728

Query: 467 PKLANKIF 474
           P +A +++
Sbjct: 729 PHMAEELW 736


>gi|329934565|ref|ZP_08284606.1| valyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329305387|gb|EGG49243.1| valyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 874

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +   GS AKF+P  + V G D+L F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQ-TGSLAKFYPNSVLVTGYDLLFFWIARMMMFGLYAMDGA 512

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + +  HG +    G+K+SKS GNVI+P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFRTIALHGMVRDQNGKKMSKSFGNVINPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M      G +P     + +D  ILS  + V+ E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVQGPLPDASEMSSTDRWILSRLNSVVAEV 627


>gi|163868662|ref|YP_001609871.1| valyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161018318|emb|CAK01876.1| Valyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 910

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 19/259 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D      + F+P  L V G DI+     +W A ++   L  
Sbjct: 481 VLDTWFSSALWPFSTLGWPDKTT-ELSTFYPTSLSVTGFDII----FFWVARMMMMGLHF 535

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P P  V+ H  +   KG K+SKS GN+IDP+E+I++   DALR+ L    A G+D 
Sbjct: 536 MGEVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADALRFTLAIMAAQGRDV 594

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             D   +    N   A  + N  +R   M    +D       A    +  IL+  S+ + 
Sbjct: 595 KLDTSRIAGYRN--FATKLWN-ATRFAQMNGVRHDPTFKPGQAKLALNRWILTELSKTIS 651

Query: 400 EIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +   +++   + + A +   +  +  D Y +  KP   +  N D  S     T  V+ +
Sbjct: 652 AVTAGIEHYKFNESAATLYRFIWNTFCDWYLELLKP-IFQGENEDAKSEAQACTAWVLDE 710

Query: 458 LAILLQAFVPKLANKIFDI 476
           +  LL  F+P +  +++ +
Sbjct: 711 VYKLLHPFMPHMTEELWSL 729



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D++ RF R+ G +VL+  G D           +AG+ T++ V++     
Sbjct: 55  HMGHALNTTIQDIMVRFQRMRGRNVLWQPGMD-----------HAGIATQMVVERQLAE- 102

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           R      ++  + FI    +  H+T  I+  ++   G
Sbjct: 103 RQEPTRQEMGREKFIERIWEWRHETGGIIANQLRRLG 139


>gi|227891066|ref|ZP_04008871.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300900|ref|ZP_07207072.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|227867155|gb|EEJ74576.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851499|gb|EFK79211.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 886

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W + ++  ++  
Sbjct: 452 VLDTWFSSALWPFSTMGWPDTESPDFKRYFPTNTLVTGYDIIFF----WVSRMIFQSVEF 507

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+     V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 508 TKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 567

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +    +    N    N I N  SR V M L  D +  +P    +  +D+ ILS  +  ++
Sbjct: 568 FSYTKMDAAWN--FINKIWN-ASRFVIMNLDSDVELSLPEASEWQLADKWILSRLNDTVR 624

Query: 400 EI 401
           ++
Sbjct: 625 DV 626



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 21/174 (12%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++E    S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 34  EDKEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQ 93

Query: 56  QKIAKAAQNAGVT-----TKVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKR 101
            K+       G++      + FV++      + AD+         L + YD    T +  
Sbjct: 94  AKVEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
                R ++  +  KG IY+G Y   +  +     +D EV +K   G +Y+ ++
Sbjct: 154 LSKAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDDKGAFYHVKY 207


>gi|67540712|ref|XP_664130.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4]
 gi|40738676|gb|EAA57866.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4]
 gi|259480097|tpe|CBF70918.1| TPA: leucyl-tRNA synthetase (AFU_orthologue; AFUA_6G04910)
           [Aspergillus nidulans FGSC A4]
          Length = 990

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 11/197 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI +   YP+   H+GH     I+DVLARF+R+ G DVL   G D  G     AA
Sbjct: 86  EKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHDVLHPMGWDAFGLPAENAA 145

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              GV+   +  +N    ++    +  S++   +F   + + +  T RI    + +KG  
Sbjct: 146 IQHGVSPAGWTTENIAKMKEQLRSISTSFNWEREFATCSPEFYEHTQRIFL-MLYEKGLA 204

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-- 177
           Y+      Y   D+    +++V   A+G  + +    V+  +   +FFR++ ++D+LL  
Sbjct: 205 YQADAMVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKKKLRQWFFRITEFKDQLLGD 261

Query: 178 --SYYESHPEFILPIER 192
             S   S PE +L  +R
Sbjct: 262 LDSLAGSWPERVLTQQR 278


>gi|143148|gb|AAA22571.1| transfer RNA-Leu synthetase [Bacillus subtilis]
          Length = 804

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRLMKQWMLKINAYADRLLE 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEELDWPESIKDMQR 219



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 35/155 (22%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK----------- 348
           S GNV++P E++   G D LR +      L   IA  + G    DG ++           
Sbjct: 580 SKGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---DGARRFLDRVWRLFIE 636

Query: 349 ---RVNADLANGIGNLVSR----SVSMILKDYDGM 376
               +N  +  G G  + R    +V  +   Y+G+
Sbjct: 637 DSGELNGKIVEGAGETLERVYHETVMKVTDHYEGL 671


>gi|229096714|ref|ZP_04227685.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228686920|gb|EEL40827.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 1033

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  +       A  ++ +LV EV  ++      + WE    N ++AS   Y T+ EV+ 
Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGFKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|55379275|ref|YP_137125.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579285|sp|Q5UZ84|SYI_HALMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55232000|gb|AAV47419.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 1074

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 37/302 (12%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-- 252
           E +   K  + DL+++  +  +  ++ D    +  VW+D+    + T G ++ P+ ++  
Sbjct: 502 ENVDLHKGTVDDLTITEDSTTY-TRVGD----VFDVWLDS---SVATWGTVNYPEQTEDF 553

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLS--ANLPLP-KKVFSHGFI-LHKGEKISKSLG 308
            + WPADL +   D  R    +W    +S  A   +P K+V  HG+  +  G  +SKS G
Sbjct: 554 EELWPADLIMEAHDQTR--GWFWSQLGMSTAATGEIPYKQVLMHGYANMPDGRGMSKSKG 611

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRS 365
            +IDP EVIE+ G D +R FL+   A G+D    + +   +++R+N      + N+    
Sbjct: 612 VLIDPHEVIEKHGRDPMRLFLLSVTAQGEDMNFSWEETAEMQRRLNI-----LWNVARFP 666

Query: 366 VS-MILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  M   D+D    T     +     DE +LS    V + + ++M +    +A+ +++  
Sbjct: 667 LPYMRADDFDPEETTVEDLRDDLELVDEWVLSRLQSVTEAMTDSMDDFENDKAVDELLEF 726

Query: 421 VSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475
           V E V R++     ++ WE + +   +A+   Y T+  V+  +A L   F P +A +++ 
Sbjct: 727 VVEDVSRFYIQVVRERMWEEEDSASKQAA---YATLYRVLESVAALFAPFTPFVAEQVYG 783

Query: 476 IL 477
            L
Sbjct: 784 AL 785


>gi|159904351|ref|YP_001551695.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159889527|gb|ABX09741.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 933

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 168/422 (39%), Gaps = 79/422 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           PV+ +    +F R+    D+  ++  +  P+F     R  +V     +G++D  +SR+ +
Sbjct: 369 PVEPLLSTQWFVRMEPMADRCRAHLVKGEPQFF--PTRWEKVYRDWLTGIRDWCISRQLW 426

Query: 215 DWGIKIP-------------DDPQYIMYV----------------------------WID 233
            WG +IP             D   YI+ +                            W  
Sbjct: 427 -WGHRIPAWFVVSETDSIVTDHTPYIVALSEEEALLQAREKFGDDVAIEQDADVLDTWFS 485

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     ++P +  V G DI+ F    +   A   +  +P  K V+
Sbjct: 486 SGLWPFSTLGWPDEDDSDFNCWYPTNTLVTGFDIIFFWVARMTMMAGAFTGQMPF-KDVY 544

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKD-GLKK 348
            HG +   +  K+SKSLGN IDP+ +I+  G DALR+ LV+E+A  G+D   D D     
Sbjct: 545 IHGLVRDEQNRKMSKSLGNGIDPLVLIDRYGTDALRFALVKEVAGAGQDIRLDYDRKTDT 604

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDESILSVCSRVLQE 400
            V  + A    N +  +    L +  G       F E        SD+ ILS  +R+  E
Sbjct: 605 SVTVEAARNFANKLWNATRFALINL-GTTTFDETFEELNFSDLQLSDKWILSRLARINSE 663

Query: 401 IRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPDRAST---------VLY 449
             +   +  +  A   +   S     D Y +  K    ++ NP  + T            
Sbjct: 664 TSKKFTSYALGEAAKGLYEFSWNDFCDWYLELIK----RRLNPGDSLTQSQLKDRRIAQQ 719

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQRLKPGFM---LHKTFDP 505
           V  +V+R+L ++L   +P L  +++  I    D+     +L    + GF+   L  +F  
Sbjct: 720 VMFKVLRELLVMLHPLMPHLTEELWHGITGFPDQKMLALNLWPACQEGFLDEELESSFSA 779

Query: 506 IF 507
           +F
Sbjct: 780 LF 781



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 52 SLVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 96


>gi|302869352|ref|YP_003837989.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572211|gb|ADL48413.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 872

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 21/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NL 284
           ++  W  +     +T G+ +  PD   AKF+P  + V G DIL F       F L A + 
Sbjct: 450 VLDTWFSSGLWPFSTLGWPERTPD--LAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDG 507

Query: 285 PLPKKVFS-HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  V + HG +  + G+K+SKS GNV+DP++ I+  G DA R+ L R    G+D    
Sbjct: 508 EQPFDVVALHGMVRDEHGKKMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGQDVPVS 567

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           ++  +   N    N + N  +R   +     DG +P  G  +  D  ILS  + V  E+ 
Sbjct: 568 EEWCQGSRN--FCNKLWN-ATRFALLNGAHTDGPLPAAGDLSTVDRWILSRLAHVTAEVD 624

Query: 403 ENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           E  +        A+V  L+         D Y +  KP  L +  P  A     V   V+ 
Sbjct: 625 EQFEAY----EFAKVCDLLYHFAWDDVCDWYVELSKP-VLAEGGP-AADATRRVLGHVLD 678

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           QL  LL   +P + ++++  L
Sbjct: 679 QLLRLLHPVIPFVTDELWAAL 699


>gi|50365171|ref|YP_053596.1| valyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827303|sp|Q6F1B1|SYV_MESFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50363727|gb|AAT75712.1| valyl tRNA synthetase [Mesoplasma florum L1]
          Length = 873

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 57/355 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++ ++ D +L   ES+ +     ER ++V+      + D ++SR+ + WG +IP   
Sbjct: 362 WFVKMDSFADMILKLQESNDKIKFFPERFDQVLKKWMENIHDWTISRQLW-WGHRIPAWY 420

Query: 222 -DDPQYIMYV----------WI---DALTNYLTTTGY----LDNPDGSKAKFW----PAD 259
             + +  +YV          WI   D L  + ++  +    L   +G ++K++    P  
Sbjct: 421 NKEDKTKIYVGMEAPKDAENWIQDEDVLDTWFSSGLWPFATLMRGEGFESKYFKEYLPNG 480

Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           + V G DI+      W + ++      +  +P  K V  HG +  + G K+SKSLGN ID
Sbjct: 481 VLVTGHDII----FSWVSRMIFQTIEYTGQIPF-KDVLIHGLVRDEHGAKMSKSLGNGID 535

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G D+LR+ L+     G+D  Y    +K   N    N + N  SR V M L++
Sbjct: 536 PMDVIVNNGSDSLRFSLLTNSTPGQDIRYSDSKVKAAWN--FINKLWN-ASRYVLMNLEE 592

Query: 373 -----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
                 +  I    +  E+D+ +L+  S+V +++     N LI +    +   +   D  
Sbjct: 593 DFKPWEEQAILNSNSLNETDKWVLTEFSKVSKQV-----NYLIDKYEFAIAGKML-YDFV 646

Query: 428 FDAQKPW-----ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++    W     ++   NP          V +++ + I+L  ++P +   I+  L
Sbjct: 647 WNTYCSWYIEFAKVNLNNPKTKEATQQTIVYLLKNILIMLHPYLPFVTEHIYKTL 701



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 47/179 (26%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  +  PN   + HIGHA++  + D + RF +L+G DVL+  G D           +AG+
Sbjct: 40  SIVLPPPNVTGKLHIGHAWDGSLQDAIIRFKKLNGFDVLYLPGMD-----------HAGI 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL---WKKIS---------- 114
           +T+V V+   R         ++  + F+    K  H+   I+   W K+           
Sbjct: 89  STQVKVEAKLR--EQGISRFELGREKFLEQAWKWKHEYAAIIRQQWSKLGLAFDYSMEKF 146

Query: 115 ------------------DKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                             +KG IYKG     W  ++  A  N + +YK  +G  Y+ ++
Sbjct: 147 TLDDDINKIVTEIFVDFYNKGLIYKGKRIVNWDPMQKTAISNVEVIYKEVEGFMYHFKY 205


>gi|229115692|ref|ZP_04245097.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228667834|gb|EEL23271.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 1033

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  +       A  ++ +LV EV  ++      + WE    N ++AS   Y T+ EV+ 
Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGFKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|323454405|gb|EGB10275.1| hypothetical protein AURANDRAFT_22805 [Aureococcus anophagefferens]
          Length = 955

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 20/187 (10%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYW 275
           G  +  DP  ++  W  +      T G+ D  PD SK  F+PA     G DIL     +W
Sbjct: 500 GTALTRDPD-VLDTWFSSGLWPFATVGWPDATPDFSK--FYPATCLETGYDIL----FFW 552

Query: 276 PAFLLSANLPLPKK-----VFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++   L    +     ++ HG +  K  EK+SK+ GNV+DP++V++E G DALR+ L
Sbjct: 553 VARMVMLGLEFTGESPFEVIYMHGLVRDKNNEKMSKTKGNVVDPLDVVDEFGADALRFSL 612

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           V  +  G+D     D +K+  N +  N I N    +   +     G  P+ G    ++ +
Sbjct: 613 VTGVTPGQDVPLSMDKVKE--NRNFCNKIWN----AARFLEPKLAGATPSDGPIQAAELA 666

Query: 390 ILSVCSR 396
            + V  R
Sbjct: 667 AMPVFER 673



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA  + + D+LARFHR  G   L+  GTD           +AG+ T++ V++
Sbjct: 105 HLGHAMFVALQDILARFHRARGRPTLWLPGTD-----------HAGIATQLLVER 148


>gi|229102814|ref|ZP_04233510.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228680599|gb|EEL34780.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 1033

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKDLFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  +       A  ++ +LV EV  ++      + WE    N ++AS   Y T+ EV+ 
Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKASA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|309389514|gb|ADO77394.1| valyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 884

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 13/126 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLG 308
           F+P D+ V G+DI+ F    W A ++   L    +     ++ HG I   +G K+SKSLG
Sbjct: 478 FYPTDVLVTGRDIIFF----WVARMIFMGLKFQDQKPFSDIYIHGLIRDAQGRKMSKSLG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+++I++ G DALR+ L+     G D  + ++ L+   N   AN I N  SR V M
Sbjct: 534 NGIDPLDIIDQFGTDALRFTLITGNTPGNDMRFREERLEASRN--FANKIWN-ASRFVLM 590

Query: 369 ILKDYD 374
            L+D++
Sbjct: 591 NLEDFE 596



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 27/176 (15%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ---- 56
           E EK   S  +  PN   Q H+GHA +  + D+L R+ R+ G   L+  GTD H      
Sbjct: 34  ETEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQGYRSLWLPGTD-HASIATE 92

Query: 57  -KIAKAAQNAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTE 99
            K+    +  G     +T + F+++            +   + M    D S + F  T +
Sbjct: 93  VKVVNKLREEGIAKEDITREEFLEKAWEWKEEYGTRITNQLKKMGSSCDWSRERF--TLD 150

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +   D    ++ K+ ++G IY+G Y   +        +D EV ++ ++G++Y+ ++
Sbjct: 151 QGCSDAVEEVFIKLYEEGLIYQGDYIVNWCPSCHTTLSDIEVEHQESEGKFYHYKY 206


>gi|225562390|gb|EEH10669.1| methionine-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 214

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 14/174 (8%)

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV---SMILKDY 373
           +E  GVDA+R++L  + A   D  Y+   + +R    L  GIGNL SR +      ++D 
Sbjct: 1   MERFGVDAMRFYLTIDGAQTSDSDYENSYIVERYKKGLQWGIGNLASRLLRGKKWSVRDS 60

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             +    G   +    +L V       ++  M+     RAL  ++ ++ + ++YF   +P
Sbjct: 61  VVLAAQGGLARDKHHELLEVMP---GRVKAEMEQLDPRRALNSIMEIIYQTNKYFHDMQP 117

Query: 434 WELKKTNPDRA--------STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           W L  +             S+ LY T E +R   ILLQ F+P  A ++ D+L V
Sbjct: 118 WSLVNSQTQPQTQPQNPTLSSALYTTAESLRIAGILLQPFMPHKAAELLDMLGV 171


>gi|299782988|gb|ADJ40986.1| Valine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 886

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P    V G DI+ F
Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP++V+E+ GVDA
Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FLV     G+D  +    +    N    N I N  SR V M L D     +P    +
Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607

Query: 384 TESDESILSVCSRVLQEI 401
             +D  ILS  +  ++++
Sbjct: 608 DLADRWILSRLNTTVKDV 625



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G
Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAG 88


>gi|220916675|ref|YP_002491979.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954529|gb|ACL64913.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 1051

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 19/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  +  F+P  +   G DI+     +W A ++   L  
Sbjct: 462 VLDTWFSSGLWPFSTMGWPEQTETLRT-FYPTSVMETGHDII----FFWVARMMMMGLHF 516

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +V      LH      KG+K+SK+ GNVIDP+ + ++ G DALR+ L    A G+D  
Sbjct: 517 MGEVPFRTVYLHPMVRDEKGQKMSKTKGNVIDPLVITDQYGADALRFTLAALTAQGRDIK 576

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVL 398
             K+ ++       AN + N  SR   M L  Y   G  P   A T +D  IL+   R +
Sbjct: 577 LAKERIEG--YRAFANKLWN-ASRFALMNLSGYQERGEDPARLARTPADRWILARLQRAV 633

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            E  E +     + A   V + V     D Y +  K   L   +P+   +V  V V  ++
Sbjct: 634 NETVEALDAFRFNDAANAVYAFVWHELCDWYIELAKE-ALASEDPEARRSVQAVLVHCLQ 692

Query: 457 QLAILLQAFVPKLANKIFDIL 477
               LL  F+P +  +++ +L
Sbjct: 693 TSYRLLHPFMPFITEELWHVL 713



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +R +   S  +  PN     H+GHA    + DVL R+ R+ G + L+  GTD  G
Sbjct: 44 DRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAG 98


>gi|297620770|ref|YP_003708907.1| isoleucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376071|gb|ADI37901.1| isoleucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 1037

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 105/466 (22%), Positives = 196/466 (42%), Gaps = 86/466 (18%)

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR--------HHDTCR----I 108
           A + AG+     VD N R   ++ +   +   D  +   KR        HH TCR     
Sbjct: 332 ACERAGIGLVCPVDNNGRYTNEIPEYTGMFVKDADKQIIKRLKEMGRVVHHGTCRHRYPF 391

Query: 109 LWKKISDKGDIYKGCYSGWY----SLRDEAYYNDDEVY-------KGADGQYYNAQHN-- 155
            W+  SD   IYK   S W+     ++D    N+D+++       +G  G++     +  
Sbjct: 392 CWR--SDTPLIYKAV-STWFVSVEKIKDAMLANNDKIHWMPEHLKEGRFGKWLEGARDWA 448

Query: 156 ---------PVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                    P+  W+ ++G  +   +  +             L +    E+    +  + 
Sbjct: 449 ISRNRYWGTPIPLWIADDGEIYVAGSIHE-------------LEVATNTEITDLHRHFID 495

Query: 206 DLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADL 260
           DL+  R  KTF    +IP+    +   W ++ +       Y   P  ++A F   +PAD 
Sbjct: 496 DLTFIRNGKTFK---RIPE----VFDCWFESGSMPYAQNHY---PFNNRALFESNFPADF 545

Query: 261 HVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV 316
              G D  R    ++   +LS    N P  K V  +G +L + G K+SK L N  DP++V
Sbjct: 546 IAEGLDQTR--GWFYTLTVLSTALFNKPAFKNVVVNGIVLAEDGNKMSKRLKNYPDPMDV 603

Query: 317 IEEVGVDALRYFLVREIAC-GKDGFYDKDGLK---KRVNADLANGIGNLVSRSVSMILKD 372
           +++ G DA+R +++   A  G+D  + + G++   +++     N     V+ +     K 
Sbjct: 604 VKKYGADAIRLYMMHSGAVKGEDLRFQEKGVELILRQIFIPFWNAYSFFVTYARIYDWKP 663

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---D 429
            D   P P A    D  ILS+ +++ +++   M    + RA+   I  + ++  ++    
Sbjct: 664 SDSY-PHPQAVI--DRWILSMVNKLNRDVEAGMDEYNLSRAVEPFIGFIDQLTNWYIRRS 720

Query: 430 AQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++ WE + T + D A   LY   +V+  L  +   FVP +++ I+
Sbjct: 721 RRRFWEEEATRDRDEAFQTLY---QVLLALTKIAAPFVPFISDAIY 763


>gi|260495113|ref|ZP_05815242.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197556|gb|EEW95074.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 887

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 18/272 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455
           +++ ++   +  A   V   +     D Y +  K   L   + D+  + L   Y+   V+
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVL 684

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 685 EQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716


>gi|138896204|ref|YP_001126657.1| valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196250160|ref|ZP_03148854.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267717|gb|ABO67912.1| Valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210344|gb|EDY05109.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 880

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 32/184 (17%)

Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239
           ++D  +SR+ + WG +IP                         DP  ++  W  +     
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ D       +++P D+ V G DI+ F    + +     +   P  K V  HG + 
Sbjct: 461 STMGWPDTEAPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN
Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577

Query: 357 GIGN 360
            I N
Sbjct: 578 KIWN 581



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 13/77 (16%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K   +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D          
Sbjct: 38  DKQPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMD---------- 87

Query: 63  QNAGVTTKVFVDQNSRN 79
            +AG+ T+  V++  R 
Sbjct: 88  -HAGIATQAKVEEKLRQ 103


>gi|317051233|ref|YP_004112349.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946317|gb|ADU65793.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 884

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 18/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+      +  KF+P  + V   DI+ F    W A ++ A    
Sbjct: 450 VLDTWFSSQLWPFATMGW-PGSTATLEKFYPTSVLVTAFDIIFF----WVARMIMAGYTF 504

Query: 287 P-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 ++V+ H  +  K G K+SKS+GNVIDP+ +I++ G DALR+ L+ +   G+D  
Sbjct: 505 TDQKPFQEVYIHALVRDKYGRKMSKSVGNVIDPLGIIDQYGADALRFTLISQAGQGRDIK 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D D ++        N + N +  ++  + +     +P   A   SD  IL   +  + E
Sbjct: 565 LDIDRIEGYTT--FVNKMWNALRFTLHTMPEHPSSQLPENLAI--SDAWILGRLNATIAE 620

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +R  +     + A A +   + +   D Y +  K    K ++ ++A     +   ++  +
Sbjct: 621 VRRGLDGYQFNEASAAIYRFIWQELCDWYIELAKHRLYKGSDEEKAGASAVLCHCLLTSM 680

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  F+P +  +I+  L
Sbjct: 681 K-LLHPFMPFVTEEIYQQL 698



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     HIGHA  M + DVL R+ R+DG + L+  GTD           +A +
Sbjct: 39 SIVIPPPNVTGYLHIGHALCMTLQDVLIRYKRMDGYEALWLPGTD-----------HASI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQIVVEKQ 96


>gi|258516438|ref|YP_003192660.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780143|gb|ACV64037.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 828

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 26/236 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D +KA  W P D ++ G +    H +Y   F        L+SA  P  + + + G +L +
Sbjct: 522 DKAKADRWMPVDQYIGGVEHAILHLLYARFFAKVFYDLKLISAEEPF-ENLLTQGMVLKE 580

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+ P E+I+  G D  R F++      +D  +   G++        N + 
Sbjct: 581 GAKMSKSKGNVVSPEEIIKRYGADTARLFILFAAPPERDLEWSDQGVEGSYR--FLNRVW 638

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            LV+   + +LK     +   G  +   + +  +    ++++ E+++ +   + A++ ++
Sbjct: 639 RLVTPLAADLLK---APVKPEGEVSGVHKEMRRLSHYTIKKVTEDIEERFNFNTAVSAIM 695

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            LV+ +  Y D       K   PDR   V+    E I  L +LL  F P LA +++
Sbjct: 696 ELVNGLYHYRD-------KLAEPDRDPAVMR---EAIEALLVLLSPFAPHLAEELW 741



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER + Y      YP+   H+GH     I DV+ARF  + G DVL   G D  G     AA
Sbjct: 31  ERPEYYCLEMFPYPSGNLHMGHVRNYSIGDVVARFKSMRGFDVLHPMGWDAFGLPAENAA 90

Query: 63  -QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            ++  +    +   N  N R     L +SYD
Sbjct: 91  IKHGNMHPADWTFANIDNMRTQLKQLGLSYD 121


>gi|302389257|ref|YP_003825078.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199885|gb|ADL07455.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 882

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 36/278 (12%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G  +  DP  ++  W  +     +T G+ D+ +  +  F+P    V G DI+ F    W 
Sbjct: 441 GSSLEQDPD-VLDTWFSSALWPFSTLGWPDDTEDLRY-FYPTSALVTGYDIIFF----WV 494

Query: 277 AFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   +   K+     V   G +   +G K+SKSLGN IDP+EVIE+ G D LR+ L 
Sbjct: 495 ARMIFMAMEFMKEEPFEYVAITGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFALC 554

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G D  +  +  K   + + AN I N  SR V M L+ ++   P     +  D  I
Sbjct: 555 TGNTPGNDIRFSWE--KAEHSRNFANKIWN-ASRFVMMNLEGFEPGEPELENLSLKDRWI 611

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISL-----------VSEVDRYFDAQKPWELKKT 439
           LS  + V  E+ E +    +  A  +V              ++++D Y D +     KK 
Sbjct: 612 LSRLNDVTSEVTEFLDKFEVGIAAQKVYDFFWSEFCDWYIEMAKIDLYGDDENA---KK- 667

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              R   VLY  +E + +   LL  FVP +  +I+  L
Sbjct: 668 ---RTQRVLYTVLERVLR---LLHPFVPFITEEIWQHL 699



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 26/143 (18%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   +  I  PN     HIGHA    I D+L R+ R+ G   L+  GTD  G     K+
Sbjct: 36  EKEPFTIVIPPPNVTGHLHIGHALNNTIQDILIRYKRMQGYPTLWLPGTDHAGIATEAKV 95

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC------------ 106
            +     G++     D     F +        Y D I    K+   +C            
Sbjct: 96  KEQLAEEGLSK---YDLGREKFLERVWAWKEKYGDTIVNQLKKLGASCDWSRFRFTLDEG 152

Query: 107 -----RILWKKISDKGDIYKGCY 124
                R ++ ++ +KG IY+G Y
Sbjct: 153 LSRAVREVFVRLYEKGLIYRGDY 175


>gi|256821549|ref|YP_003145512.1| leucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795088|gb|ACV25744.1| leucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 881

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA 
Sbjct: 39  REKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPIGWDAFGLPAENAAV 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               +   +  +N    +    +L  +Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 99  KNKASPAPWTYENIEYMKGQLKMLGFAYDWDRELATCKPEYYRWEQWFFTKLYEKGLVYK 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   D+    +++V  GA  +       PV+  E   +F +++AY ++LL+   
Sbjct: 159 KTSSVNWCPNDQTVLANEQVVDGACWRC----DTPVEQKEIPQWFIKITAYAEELLNDLD 214

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 215 KLDGWPEMVKTMQR 228


>gi|227514511|ref|ZP_03944560.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087068|gb|EEI22380.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 884

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P    V G DI+ F
Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP++V+E+ GVDA
Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FLV     G+D  +    +    N    N I N  SR V M L D     +P    +
Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607

Query: 384 TESDESILSVCSRVLQEI 401
             +D  ILS  +  ++++
Sbjct: 608 DLADRWILSRLNTTVKDV 625



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G
Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAG 88


>gi|260663368|ref|ZP_05864259.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552220|gb|EEX25272.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 884

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P    V G DI+ F
Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP++V+E+ GVDA
Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FLV     G+D  +    +    N    N I N  SR V M L D     +P    +
Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607

Query: 384 TESDESILSVCSRVLQEI 401
             +D  ILS  +  ++++
Sbjct: 608 DLADRWILSRLNTTVKDV 625



 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G
Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAG 88


>gi|295669003|ref|XP_002795050.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226285743|gb|EEH41309.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 972

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI     YP+   H+GH     IAD+LARF  + G DVL   G D  G     AA 
Sbjct: 67  KEKAYILAMFPYPSGTLHMGHLRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAAI 126

Query: 64  NAGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  QN  N ++  MA      ++  + T     +   + L+  + ++G  Y+
Sbjct: 127 ERGIDPAQWTMQNIANMKEQFMAIGAHFDWNRELMTCSPEFYKHTQRLFLMLYERGLAYQ 186

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL    
Sbjct: 187 AKALVNYDPVDKTVLANEQV--NANGCSWRSGAK-VKKVELKQWFFRITAFKEALLKDLD 243

Query: 178 SYYESHPEFILPIER 192
           +  +  PE +L ++R
Sbjct: 244 ALADGWPERVLSMQR 258


>gi|213418567|ref|ZP_03351633.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 232

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 30/227 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------DGQYYNAQHNPVQWME----------- 161
           S  Y   ++  +  D   KG             + +   A ++P + +E           
Sbjct: 126 SQLYD-PEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPV 184

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
               E +FF L ++ + L ++  S     L  +  N++  + +SGL+
Sbjct: 185 MRDSEHFFFDLPSFSEMLQAWTRSG---ALQEQVANKMQEWFESGLQ 228


>gi|15679374|ref|NP_276491.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334357|sp|O27428|SYI_METTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2622484|gb|AAB85852.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 1044

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 30/280 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VWID+         Y    +  +  F P D    G D  R  F++      +    +
Sbjct: 515 VLDVWIDSGVAGWAALHYPSETELFREWF-PYDFITEGHDQTRGWFYSQLGCGVIALDEV 573

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  ++V  HGF L  +G K+SKSLGNV++P +VIE+ G D LR++L+ E    +D  +  
Sbjct: 574 PY-RRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLLWENKPWEDLKFVW 632

Query: 344 DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCS 395
           D L+  VN  + N + N+ V  +  M L  +      PG       +F + D  ILS  +
Sbjct: 633 DELRN-VNK-MFNILWNVYVFATTYMSLDRF-----QPGDHSAEDLSFRDEDRWILSRIN 685

Query: 396 RVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449
            V  ++ E ++N   HRA  ++   +V ++ R++      + W +++ +PD+  A   LY
Sbjct: 686 SVALKVTEAIENLHFHRATREIHDFIVEDLSRWYIRLIRSRTW-IERDDPDKLAAYHTLY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               V++ L + L    P +   I+  L    E    +S+
Sbjct: 745 T---VLKTLIVTLSPMAPHVCEDIYQNLVRGAEPDSPESI 781


>gi|296328555|ref|ZP_06871074.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154364|gb|EFG95163.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 887

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 22/275 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P +  V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTNTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453
           +++ ++   +  A   V   +     D Y +  K   ++  N D        T  Y+   
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           ++ Q   LL  F+P +  +I+  + V  +    Q 
Sbjct: 683 ILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQQ 717


>gi|218290828|ref|ZP_03494897.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239186|gb|EED06387.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 881

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 162/390 (41%), Gaps = 57/390 (14%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +LR+E Y   +E    A G + +     V+    E +F R+       L          L
Sbjct: 327 ALREEGYLVKEETLDHAVG-HCDRCGTVVEPYLSEQWFVRMEPLARDALERARRGELRFL 385

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYV---- 230
           P +R  +V     + ++D  +SR+ + WG +IP              DD  + ++     
Sbjct: 386 P-DRFMKVFEQWLTNVRDWCISRQLW-WGHRIPAWYCASCGQVSVSRDDLDHCLHCGSAD 443

Query: 231 ----------WIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                     W  +     +T G+ ++ PD   A+F+P  L V G DIL     +W A +
Sbjct: 444 VKQDEDVLDTWFSSALWPFSTMGWPEHTPD--LARFYPTSLLVTGYDIL----FFWVARM 497

Query: 280 L------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +      +  +P  + V  HG +   KG+K+SKS GN IDP++VI++ G DALR+ L   
Sbjct: 498 VFMGVHFTGKMPF-QTVLLHGLLRDAKGQKMSKSKGNGIDPMDVIDKYGADALRFMLASN 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDES 389
              G D  +  + ++   N    N + N  +R V M ++  DG  P P    +   +D  
Sbjct: 557 TVLGNDLRFSWEKVEGARN--FLNKLWN-AARFVLMNVE--DGFSPQPLEAQSLDLADRF 611

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           IL      ++ +   ++   +  A   V     +   D Y +  K   L     ++    
Sbjct: 612 ILHRLGETIRRVTSALEEYDVGEAARAVYEFTWDEFCDWYIEFAKI-NLYGDREEKKRQT 670

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V + V+ ++  LL  ++P +  +I+  L
Sbjct: 671 QSVLLTVLSRVLALLHPYIPFVTEEIWQAL 700



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79
           H+GHA +  + D+  RF R+ G   L+  GTD           +AG+ T+  V+Q  R 
Sbjct: 53  HLGHALDTTLQDIATRFRRMQGYSTLWVPGTD-----------HAGIATQARVEQALRE 100


>gi|184154973|ref|YP_001843313.1| valyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|183226317|dbj|BAG26833.1| valyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 884

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G++ P D +       ++  W  +     +T G+ +       +++P    V G DI+ F
Sbjct: 435 GMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLVTGYDIIFF 494

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++  +L    K     V  HG I   +G K+SKSLGN IDP++V+E+ GVDA
Sbjct: 495 ----WVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVEKYGVDA 550

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+FLV     G+D  +    +    N    N I N  SR V M L D     +P    +
Sbjct: 551 LRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLGDMPAPQLPDQSKW 607

Query: 384 TESDESILSVCSRVLQEI 401
             +D  ILS  +  ++++
Sbjct: 608 DLADRWILSRLNTTVKDV 625



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G
Sbjct: 41 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAG 88


>gi|239941124|ref|ZP_04693061.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239987602|ref|ZP_04708266.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291444565|ref|ZP_06583955.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291347512|gb|EFE74416.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 873

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 27/264 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D S AKF+P  + V G DIL F       F L  N  +
Sbjct: 453 VLDTWFSSGLWPFSTLGWPERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGV 511

Query: 287 PK--KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GNV++P++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFGTIVLHGMVRDEHGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402
           D ++   +A  +N I N  +R   M     +G +P+    + +D  ILS  ++ + ++  
Sbjct: 572 DWVQG--SAKFSNKIWN-ATRFALMNGATIEGELPSAEEMSVTDRWILSRLNKTVADVDA 628

Query: 403 -------ENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTVE 453
                    +   L H A  +V     E+ +  +F   +P E+             V  E
Sbjct: 629 FYDDFQFAKISEALRHFAWDEVFDWYVELSKTTFFAGGRPAEVSG----------RVLGE 678

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  +  LL   VP +   ++  L
Sbjct: 679 VLDVMLRLLHPIVPFVTEALWTAL 702


>gi|328953118|ref|YP_004370452.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453442|gb|AEB09271.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 886

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 22/263 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ ++    F+P  + V   DIL F    W A ++   L
Sbjct: 449 VLDTWFSSALWPFSTLGW---PEQTRELTLFYPTSVLVTAFDILFF----WVARMMMMGL 501

Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              K+V      +H      +G+K+SKS GNV+DP+EV+EE G DA R+ L    A G+D
Sbjct: 502 YFMKEVPFREVYIHALVRDAEGQKMSKSKGNVVDPLEVMEEYGTDAFRFSLAAFAAMGRD 561

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
               ++ +    N    N I N  SR   M L DYD         A +  +  I+S   +
Sbjct: 562 VRLSEERIAGYRN--FVNKIWN-ASRFTLMNLADYDYAAAAHDTVALSLEERWIVSRLQQ 618

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           V Q + E + +    +A  Q+         D Y +  KP     T+P R      V  E+
Sbjct: 619 VCQAVTEALDSYNFDQAANQLYQFAWHEFCDWYLELIKPALYDNTDPVRRRHTQRVLQEI 678

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  L  LL  F+P +  +I+  L
Sbjct: 679 LSALLRLLHPFMPFVTEEIWHKL 701


>gi|255020636|ref|ZP_05292698.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969872|gb|EET27372.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 823

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 12/197 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ Q H+GH     I D +AR+ R+ G  VL   G D  G     AA
Sbjct: 36  EGEKYYVLAMFPYPSGQLHMGHVRNYSIVDAIARYQRMRGKSVLHPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              GV    +  +N  + R     L +SYD   +F   T + ++   + L+ K+ ++G +
Sbjct: 96  LKHGVAPAQWTFENIAHMRGQLKRLGLSYDWTREFATCTPE-YYRWEQWLFLKLWERGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    DG+ + +    V+  E   +F R++AY D+LL  
Sbjct: 155 YQKESTVNWDPVDQTVLANEQV---VDGRGWRSGAL-VERREIRQWFLRITAYADELLQG 210

Query: 180 YE----SHPEFILPIER 192
            E      P+ +L ++R
Sbjct: 211 LEQLQGQWPDQVLTMQR 227



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 25/192 (13%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G +L  G K+SKS GN +DP E+++  G D  R F++         F       
Sbjct: 571 RRLLTQGMVLKDGAKMSKSKGNTVDPQELLDRYGADTARLFIL---------FAAPPEQS 621

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
              +     G    + R V  +++DYDG   P P   + +   +     + ++ +  N++
Sbjct: 622 LEWSDSAVEGAYRFLQR-VWRLVQDYDGEPTPLPAKLSGAARDLRRAIHQCIERVTFNLE 680

Query: 407 NQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +   + A+A  + L + + R  D + P EL+            V  E +  L  +L  F
Sbjct: 681 ERHHFNVAIAACMELTNTLAR-VDGKDP-ELRA-----------VLGEGLSALVRMLAPF 727

Query: 466 VPKLANKIFDIL 477
            P LA   +  L
Sbjct: 728 TPHLAEACWMAL 739


>gi|237809562|ref|YP_002894002.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501823|gb|ACQ94416.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 861

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 17/241 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 34  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L +SY  D  + T   +++   +  + ++  KG +Y
Sbjct: 94  IKNNSAPAKWTYENIEYMKGQLKMLGLSYDWDRELATCTPQYYRWEQWFFTELYKKGLVY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++AY ++LL+  
Sbjct: 154 KKTSSVNWCPNDQTVLANEQV---QDGCCWRCD-TPVEQKEIPQWFVKITAYAEELLTDL 209

Query: 179 -YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
              +  PE +  ++R    R+E ++        +  S ++FD     PD    + YV + 
Sbjct: 210 DKLDGWPEMVKTMQRNWIGRSEGLTMTFH----VENSEQSFDIYTTRPDTLMGVTYVAVA 265

Query: 234 A 234
           A
Sbjct: 266 A 266


>gi|322412300|gb|EFY03208.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 883

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTIGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+I       E++ ++  V +     
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGLI-----LEEAESNVAKVAASEAG- 606

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 607 ---NVTDQWILHNLNETIAKVTE 626



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GQGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|256028619|ref|ZP_05442453.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766537|ref|ZP_06525915.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718092|gb|EFD82104.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 887

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 18/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLESFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455
           +++ ++   +  A   V   +     D Y +  K   L   + D+  + L   Y+   ++
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTIL 684

Query: 456 RQLAILLQAFVPKLANKIF 474
            Q   LL  F+P +  +I+
Sbjct: 685 EQGLRLLHPFMPFITEEIW 703


>gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 927

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 25/254 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++L     LD         WPADL++ G D  R  F++    +  ++   
Sbjct: 524 IMDVWFDSGSSHLAV---LDEKTVWPELSWPADLYLEGSDQHRGWFNSSLSTSVAVTGRA 580

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGKD 338
           P  + V +HGF++  KG K+SKSLGNV+DP++VI+++G D LR ++       ++A  ++
Sbjct: 581 PY-RAVLTHGFLVDEKGRKMSKSLGNVVDPLKVIQQLGADILRLWVSSADYKSDLAVSQN 639

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                    +++       + N+     S     Y+ M+       E D   L    R++
Sbjct: 640 ILKQLSEAYRKIRNTCRFLLSNIYDFDPSADQVAYEKMV-------ELDRWALLKLHRLI 692

Query: 399 QEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLYVTV 452
           +++     +   H     +     V   +RY D  K   +     +PDR  A TVLY+ +
Sbjct: 693 EKVLNAYHDYEFHVVYHAIHNFCTVDMSNRYLDIIKDRLYTSPAESPDRRAAQTVLYLIL 752

Query: 453 EVIRQLAILLQAFV 466
           + + +L   + AF 
Sbjct: 753 DALVRLLTPVLAFT 766



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 19/155 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  +     Y N   H+GH    I+ D++ ++  + G D  +  G D HG  I + A 
Sbjct: 47  KPKFILHDGPPYANGDIHLGHTLNKILKDIIVKYKSMTGYDAPYVPGWDTHGLPIEQQAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCR 107
            A    +  VD  +  FR+         + I  ++FIR            T   H +  +
Sbjct: 107 KALGINRHEVD--TVVFRNKCKEYALKFVGIQKEEFIRLGVRADWDRSYVTLMPHFEARQ 164

Query: 108 I-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I ++ +++ +G IYKG    ++    E    + EV
Sbjct: 165 IGVFGEMAKRGYIYKGLKPVYWCASCETALAEAEV 199


>gi|169831567|ref|YP_001717549.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|254782388|sp|B1I4A3|SYI_DESAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169638411|gb|ACA59917.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 930

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 49/265 (18%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++      L  PD      WPAD+++ G D  R  F++    A  ++   P
Sbjct: 527 MDVWFDSGSSHWAV---LTQPDYWPDLQWPADMYLEGSDQHRGWFNSSLTTAVAVTGEPP 583

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             + V +HGF++  +G K+SKSLGNVI+P+EV++E+G D LR ++     C  D      
Sbjct: 584 Y-RAVLTHGFVVDEQGRKMSKSLGNVIEPMEVLKELGADILRLWV-----CSAD------ 631

Query: 345 GLKKRVNADLANGIGNLVSRSVSMI----------LKDYDGMIPTPGAFTESDE------ 388
               R +  ++ GI   +S +   I          L+D+D    T  A+TE  E      
Sbjct: 632 ---YRGDLAVSPGILKQMSEAYRKIRNTFRFLLGNLQDFDPDRDTV-AYTELTELDRYAL 687

Query: 389 -SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV------DRYFDAQKPWELKKTNP 441
             +  V  RVL+  RE   +Q+ H      ++ +S        DR +        +  N 
Sbjct: 688 LKLHRVTDRVLRAYREYEFHQVYHTLYNYCVTDLSAFYLNVIKDRLYCEPA----RSVNR 743

Query: 442 DRASTVLYVTVEVIRQLAILLQAFV 466
             A TVLY  ++ + +L + + A+ 
Sbjct: 744 RGAQTVLYAVLDSLVRLLVPVLAYT 768



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 19/155 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K  +     Y N   H+G +   I+ D++ +F  +DG +  +  G D HG  I + A 
Sbjct: 47  RPKFILHDGPPYANGHIHLGTSLNKILKDIVVKFKSMDGYNAPYVPGWDTHGLPIEQQAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCR 107
                 +  +  +   FR M     + + D  R   KR                H +T +
Sbjct: 107 KQLKIKRSAL--SPVEFRRMCREYALKFVDIQRAEFKRLGVRGEWHNPYLTLQPHFETRQ 164

Query: 108 I-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I ++ +++ +G IYKG  S ++    E    + EV
Sbjct: 165 IEVFGEMAKRGYIYKGLKSVYWCADCETALAEAEV 199


>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123743221|sp|Q3AEP2|SYI_CARHZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 925

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+ P+      WPADL++ G D  R  F++    A       
Sbjct: 523 IMDVWFDSGSSH---AAVLEQPEYWPDLRWPADLYLEGSDQHRGWFNSSLSTAVATRGMA 579

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  KG K+SKSLGNV+DP++VI+E+G D LR ++ 
Sbjct: 580 PY-KAVLTHGFLVDEKGRKMSKSLGNVVDPLKVIKELGADILRLWVA 625



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           R K  +     Y N   H+GH    ++ D++ +F  +DG D  +  G D HG  I  +A 
Sbjct: 47  RPKFILHDGPPYANGDIHMGHVLNKVLKDMIVKFKSMDGYDAPYVPGWDTHGLPIEQRAI 106

Query: 63  QNAGVTTK 70
           ++ G+  K
Sbjct: 107 KDLGINRK 114


>gi|325684336|gb|EGD26505.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 879

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +         +R    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D  Q ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478

Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + +   +   P    V  HG I   +G K+SKSLGN IDP++VI+
Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVID 537

Query: 319 EVGVDALRYFLVREIACGKD 338
           + G DALR+FL+   A G+D
Sbjct: 538 KYGADALRWFLLNGTAPGQD 557



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 24/137 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      K FV++               ++ +   LD S + F  T +K      R
Sbjct: 99  EQGVSRYDLGRKKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY 124
            ++ ++ ++G IY+G Y
Sbjct: 157 RVFVQLYNEGLIYRGEY 173


>gi|317152459|ref|YP_004120507.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942710|gb|ADU61761.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 888

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 17/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P    V G DIL F    W A ++   L  
Sbjct: 450 VLDTWFSSALWPFSTLGWPDK-TPELARYYPTSCLVTGFDILFF----WVARMMMMGLQF 504

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++V  H   +H      KG+K+SKS GNVIDP+++IE+ G DALR+ L    A G+D  
Sbjct: 505 MERVPFHDVYIHALVRDEKGKKMSKSTGNVIDPLDMIEKYGADALRFTLTSFAAMGRDIK 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             +  ++   +    N I N  +R   M L D    +P     + +D  IL     V   
Sbjct: 565 LSEQRIEGYKH--FMNKIWN-AARFAMMNLPDEIPAVPLDQTSSLADTWILHRLEEVKTT 621

Query: 401 IRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E       +     +   + SE  D Y +  KP    +    +A+T   +   V+ + 
Sbjct: 622 VAEATAAYRFNEVAQTLYKFIWSEFCDWYLEMIKPALYGEDEAAKAATQKALWT-VLSET 680

Query: 459 AILLQAFVPKLANKIFDIL 477
            +LL    P ++ +I+ +L
Sbjct: 681 MVLLHPVAPFISQEIWSVL 699



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 35/173 (20%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA  + + D+L RFHR  G +VL+  GTD  G     A QN  V
Sbjct: 41  SIVIPPPNVTGVLHMGHALNLTLQDILCRFHRQQGRNVLWVPGTDHAG----IATQNV-V 95

Query: 68  TTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIRTTEKRH 102
             ++  +  SR+                          R M   +D + + F  T + + 
Sbjct: 96  ERQLKEEGKSRHDLGREKFIERVWEWKQEKGDRILGQIRRMGASVDWTRECF--TFDDQR 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
               R ++ ++  +G IYKG Y   +  R      DDEV ++   G  Y+ Q+
Sbjct: 154 ARAVREVFVELYRQGLIYKGDYIINWCNRCHTALADDEVEHEPKPGHLYHIQY 206


>gi|297194378|ref|ZP_06911776.1| valyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720964|gb|EDY64872.1| valyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 873

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 23/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  D S AKF+P  + V G DIL F       F L A    
Sbjct: 453 VLDTWFSSGLWPFSTLGWPEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 511

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  ++ + E+  
Sbjct: 572 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPAAEEMSSTDRWILSRLNKTVAEVDA 628

Query: 403 -------ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
                    +   L H A  +V       D Y +  K        P R S    V  EV+
Sbjct: 629 YYEDYQFAKLSETLFHFAWDEVF------DWYVELSKTTFFAGGEPARVSA--RVLGEVL 680

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  LL   VP +   ++  L
Sbjct: 681 DVMLRLLHPVVPFVTETLWTAL 702


>gi|260892210|ref|YP_003238307.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864351|gb|ACX51457.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 882

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 35/276 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +     +T G+ +     K  F+P  + V G+DI+     +W A 
Sbjct: 443 RVEQDPD-VLDTWFSSALWPFSTLGWPEATPELKF-FYPTSVLVTGRDII----FFWVAR 496

Query: 279 LLSANLP----LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L     +P ++VF HG +L   G K+SKSLGN +DP+EVIE  G D+LR+ LV  
Sbjct: 497 MIFMGLKFMGDVPFREVFIHGLVLDALGRKMSKSLGNGVDPLEVIESHGADSLRFMLVTG 556

Query: 333 IACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESD 387
              G D    F   DG +  +N  L N      SR V M L + + + P  G       D
Sbjct: 557 NTPGNDLRFHFERLDGARNFIN-KLWNA-----SRFVLMNLDEGESL-PRLGEVRLELVD 609

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNP 441
             I+S     LQ++ E +   L    L +   L+ E       D Y +  K   L  ++P
Sbjct: 610 RWIIS----RLQDVVERVTAYLEEYELGEAARLLYEFIWDEFCDWYIEMAK-LRLYGSDP 664

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   T   V   V+     LL  F+P +  +++  L
Sbjct: 665 EARRTAQVVLKSVLGTCLKLLHPFIPFVTEEMWHQL 700


>gi|325125475|gb|ADY84805.1| Valine-tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 879

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +         +R    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D  Q ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478

Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + +   +   P    V  HG I   +G K+SKSLGN IDP++VI+
Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVID 537

Query: 319 EVGVDALRYFLVREIACGKD 338
           + G DALR+FL+   A G+D
Sbjct: 538 KYGADALRWFLLNGTAPGQD 557



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 24/137 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      + FV++               ++ +   LD S + F  T +K      R
Sbjct: 99  EQGVSRYDLGREKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY 124
            ++ ++ ++G IY+G Y
Sbjct: 157 RVFVQLYNEGLIYRGEY 173


>gi|257463901|ref|ZP_05628287.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061430|ref|ZP_07925915.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687106|gb|EFS23941.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 887

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 14/256 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    ++P    V G DI+ F       F L    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELELYYPTSTLVTGADIIFFWVARMIMFGLYEMK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P + VF HG +    G K+SKSLGN  DP+++IE+ G DA+R+ ++   + G+D  + 
Sbjct: 509 DIPFRNVFFHGIVRDDLGRKMSKSLGNSPDPLDLIEQYGADAIRFSMIYNTSQGQDVRFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
           +  L+  +  + AN I N  SR V M L+D+D          +   DE ILS      + 
Sbjct: 569 EKLLE--MGRNFANKIWN-ASRFVMMNLEDFDINTFDEKEVKYELVDEWILSRLQETAKA 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   + N  +  A   V   +     D Y +  K       +     T  YV   ++   
Sbjct: 626 VETRLSNFQLDEAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLWSMLEAG 685

Query: 459 AILLQAFVPKLANKIF 474
             LL  F+P ++ +I+
Sbjct: 686 LRLLHPFMPYISEEIW 701


>gi|313123426|ref|YP_004033685.1| valyl-tRNA synthetase (valine--tRNA ligase) (valrs) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279989|gb|ADQ60708.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 879

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +         +R    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D  Q ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478

Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + +   +   P    V  HG I   +G K+SKSLGN IDP++VI+
Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVID 537

Query: 319 EVGVDALRYFLVREIACGKD 338
           + G DALR+FL+   A G+D
Sbjct: 538 KYGADALRWFLLNGTAPGQD 557



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 24/137 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      K FV++               ++ +   LD S + F  T +K      R
Sbjct: 99  EQGVSRYDLGRKKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY 124
            ++ ++ ++G IY+G Y
Sbjct: 157 RVFVQLYNEGLIYRGEY 173


>gi|256850916|ref|ZP_05556305.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661130|ref|ZP_05862044.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934172|ref|ZP_06339450.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615978|gb|EEU21166.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548067|gb|EEX24043.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301786|gb|EFA94052.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K L   ++  +     ER ++        + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           +     MYV                    W  +     +T G+ D       +++P +  
Sbjct: 419 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L     
Sbjct: 535 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  +D+ I    +  ++E+
Sbjct: 592 PAHMPDVAKFDLADKWIFDRLNHTVKEV 619



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  I D L R  R+ G D L+  G D  G  IA  A+    
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IAMQAKVEAK 96

Query: 68  TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105
             K  +D++        +   D  D                LD S + F  T +K     
Sbjct: 97  LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 154

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQH 154
            R ++ ++ ++G IY+G Y   +  + E   +D EV    D G +Y+ ++
Sbjct: 155 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHQDDKGAFYHVKY 204


>gi|148243515|ref|YP_001228672.1| valyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851825|emb|CAK29319.1| Valyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 918

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 20/294 (6%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  +R  F    +I  D +  +  W  +     +T G+ D       +++P  L V G D
Sbjct: 451 LEKARAQFGAEAQIEQD-EDALDTWFSSGLWPFSTLGWPDQNAADLQRWYPTSLLVTGFD 509

Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    +   A   +   P    V+ HG +      K+SKS GN IDP+ +I+  G D
Sbjct: 510 IIFFWVARMTMMAGAFTGKTPF-ADVYIHGLVRDENNRKMSKSAGNGIDPLLLIDRYGAD 568

Query: 324 ALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPT-- 379
           ALR+ LVRE+A  G+D   D D         + +    N +  +    L +  G  P   
Sbjct: 569 ALRFALVREVAGAGQDIRLDYDRKSDTSGTVEASRNFANKLWNATRFALMNLGGETPASL 628

Query: 380 ----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKP 433
               P A   +D  ILS  +RV +E      +  +  A   +     +EV D Y +  K 
Sbjct: 629 GKPDPAALQLADRWILSRLARVNRETAARYSSYGLGEAAKGLYEFAWNEVCDWYLELSKR 688

Query: 434 WELKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                 NP   +     T   V  +V+ +L  +L   +P L+ +++  L  AD+
Sbjct: 689 RLNPGENPSAEALADQRTARQVLAQVMEELQRMLHPLMPHLSEELWHALTGADD 742


>gi|147921041|ref|YP_685149.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121685571|sp|Q0W720|SYI_UNCMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110620545|emb|CAJ35823.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 1104

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 25/266 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I  VW D+      T  +    D     +WPAD  V G D  R  F++      +     
Sbjct: 569 IFDVWFDSAVASWATLHFPGRKD--LMDWWPADFIVEGHDQTRGWFYSQLGAGMVGFGKA 626

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V  HGF L   G+K+SKSLGNV+ P +V+E++G D LR +++ + A  +D  +  
Sbjct: 627 PY-NGVCMHGFTLDETGKKMSKSLGNVVAPEDVVEKLGADTLRLYVLSQNAPWEDLSFSW 685

Query: 344 DGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPT----PGAFTESDESILSVCSRV 397
           +      N + A  I   V R     M+L  +D    T     G+    D  ILS    V
Sbjct: 686 EECG---NINRAINIFWNVYRFPLPYMVLDKFDPAKVTLESVKGSLRVEDRWILSKLQAV 742

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           ++++   M    +HRA   +IS + E + R++     ++ W ++  +PD+  A  VLY T
Sbjct: 743 IKDVDTYMATYELHRATRSIISFILEDLSRWYVQLARERTW-VEADDPDKLAAYRVLYDT 801

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           +    +   L+  F P +A +++  L
Sbjct: 802 LVTTVK---LIAPFTPYIAERMYQNL 824


>gi|182413823|ref|YP_001818889.1| valyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841037|gb|ACB75289.1| valyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 910

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 168/423 (39%), Gaps = 77/423 (18%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L +EAY N+    + AD         P++    E ++ R    ++   +  + H +F   
Sbjct: 336 LEEEAYSNNVGYSERAD--------VPIEPRLTEQWWLRYPKIEEAKAAVRDGHIKF--H 385

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------DDPQY- 226
            ER ++V       ++D  +SR+ + WG +IP                       DPQ  
Sbjct: 386 PERWSKVYLHWLENIQDWCISRQLW-WGHRIPVWYRKGADRSDPKNWHVSVDGPADPQNW 444

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAF 278
                ++  W  +      T G+ D  +  +A F   +P    V G DI+     +W A 
Sbjct: 445 EQEDDVLDTWASSWLWPFATMGWPDQAEMKQAGFDYFYPTSTLVTGPDII----FFWVAR 500

Query: 279 LLSANLP-----------LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           ++ A L            +P + V+  G I   +G K+SKSLGN  DP+ +I++ G D L
Sbjct: 501 MIMAGLEFVRPGESLERRIPFRDVYFTGIIRDQQGRKMSKSLGNSPDPLVLIDKYGADGL 560

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIP-----T 379
           R+ ++     G+D  + +D ++   N    N + N    R +S    D   +        
Sbjct: 561 RFGIISIAPQGQDIRFQEDRIEGGKN--FCNKLWNACRFRQMSGEAGDNASLAAIAARLE 618

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
           P  F   D +IL   S    E+    +      A+  + S       D Y +  K    K
Sbjct: 619 PAKFDADDHAILDRLSATTAELERCFREFEFSAAVQALYSFFWGDFCDWYVEVSK---AK 675

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
               +  +  L +   V+RQ  +LL  FVP +  +++ +L  A      +S+D R KPG 
Sbjct: 676 MQAAETKANCLAIQDVVLRQTLLLLHPFVPFITEELWGLLGYAGN----ESVDAR-KPGA 730

Query: 498 MLH 500
            + 
Sbjct: 731 FIQ 733


>gi|288553603|ref|YP_003425538.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544763|gb|ADC48646.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 880

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 37/283 (13%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G + P DP+       ++  W  +     +T G+ D       +F+  ++ V G DI+ F
Sbjct: 432 GHEAPKDPENWKQDEDVLDTWFSSALWPFSTMGWPDTNAADYERFYTTNVLVTGYDIIFF 491

Query: 271 HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
               W + ++   L    K     V  HG +   +G K+SKSLGN +DP++VI++ G DA
Sbjct: 492 ----WVSRMIFQGLEFTGKRPFNDVLIHGLVRDSEGRKMSKSLGNGVDPMDVIDKYGADA 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTP 380
           LR+FL    + G D  +  + ++   N       GN +  +    L + DG+    I   
Sbjct: 548 LRFFLSTGSSPGNDLRFYWEKVESTWN------FGNKIWNASRFALMNMDGLTYDEIDLS 601

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPW 434
           G  + +D+ IL+     LQE  E++   +      +V  L+         D Y +  K  
Sbjct: 602 GEKSIADKWILT----RLQETTEDVTRLIDAYEFGEVGRLLYNFIWDDFCDWYIEMAKL- 656

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N +   T   V   V+ Q   LL   +P +  +I+  L
Sbjct: 657 PLNSDNEEAKRTTRSVLAYVLDQTMRLLHPIMPFITEEIWQHL 699



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D+L+R  R+ G D L+  G D  G  IA  A+  G 
Sbjct: 43  SIVIPPPNVTGKLHLGHAWDTTLQDILSRVKRMQGYDTLWLPGMDHAG--IATQAKVEGK 100

Query: 68  TTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTCR 107
             +  V   D     F + +      Y DFIR                 T ++       
Sbjct: 101 LREEGVSRYDLGREKFLEKSWEWKEEYADFIRNQWSKLGLSLDYSRERFTLDEGLSKAVN 160

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ K+ +KG IY+G Y   W      A  + + +Y+   G +Y+  +
Sbjct: 161 EVFVKLYEKGLIYRGEYIINWDPQTKTALSDIEVIYQDVQGAFYHMNY 208


>gi|269125779|ref|YP_003299149.1| valyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310737|gb|ACY97111.1| valyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 883

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 40/302 (13%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D  +SR+ + WG +IP                        DP  ++  W  +    L+
Sbjct: 422 MHDWCISRQLW-WGHRIPVWYGPNGEVCCPGPDEEPPAGWTQDPD-VLDTWFSSALWPLS 479

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFS-HGFILH 298
           T G+ D       +F+P  + V G DIL F       F L A   + P KV + HG +  
Sbjct: 480 TLGWPDR-TADLERFYPTSVLVTGYDILFFWVARMMMFGLYAMDGVEPFKVIALHGMVRD 538

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           + G+K+SKS GNV+DP+E IE  G DA R+ L+R    G D    ++  +   N    N 
Sbjct: 539 QYGKKMSKSFGNVVDPLEWIERYGADATRFTLLRGANPGGDVPIAEEWAQGSRN--FCNK 596

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N  +R   M      G +P     +++D  ILS    V+ E+  +M++    +A   +
Sbjct: 597 LWN-ATRFALMNGAHVRGELPQ--ELSDADAWILSRLQHVIAEVDRHMEDFEFAKACEAL 653

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +   D Y +  K     +   +RA     V  EV+ +L  LL   VP +  +++ 
Sbjct: 654 YHFAWDEVCDWYVELAK----VQLQDERAEATRRVLGEVLDKLLRLLHPIVPFVTEELWT 709

Query: 476 IL 477
            L
Sbjct: 710 SL 711


>gi|257058592|ref|YP_003136480.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588758|gb|ACU99644.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 909

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 33/318 (10%)

Query: 184 PEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNY 238
           P + +  E  NE+     F+ +  +D ++ +    +G  I +  DP  ++  W  +    
Sbjct: 419 PAWYVISETNNEITDHTPFIVADNEDEAIKKAQEQYGENITLEQDPD-VLDTWFSSGLWP 477

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFI 296
            +T G+ +N +    +++P    V G DI+ F    +   A   +  +P  K V+ HG +
Sbjct: 478 FSTLGWPENTE-DLTRYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQIPF-KDVYIHGLV 535

Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GFYDKDGLKKRVN 351
               G+K+SKS  N IDP+ +IE  G DALRY L++E+A  G+D    +  K    + V 
Sbjct: 536 RDENGKKMSKSANNGIDPLILIENYGTDALRYTLIKEVAGAGQDISLQYNRKTDESESVE 595

Query: 352 A--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR--------VLQEI 401
           A  + AN + N  +R V M L+       TP      D   L +C R        ++Q+ 
Sbjct: 596 ASRNFANKLWN-AARFVMMNLQGN-----TPKTLGVPDREKLELCDRWILSRFHQLVQQT 649

Query: 402 RENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           R  ++N  +  A   +   +     D Y +  K    K +N +           V+    
Sbjct: 650 RNYVENYGLGEAAKGLYEFIWGDFCDWYIELVKTRLWKDSNTESRLVAQQTLAYVLDNTL 709

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL  F+P +  +I+  L
Sbjct: 710 RLLHPFMPHITEEIWQTL 727



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+E  + DVL R+HR+ G + L   GTD
Sbjct: 43 SIVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMCGHNTLCLPGTD 87


>gi|254302263|ref|ZP_04969621.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322455|gb|EDK87705.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 887

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 22/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453
           +++ ++   +  A   V   +     D Y +  K   ++  N D        T  Y+   
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           ++ Q   LL  F+P +  +I+
Sbjct: 683 ILEQGLRLLHPFMPFITEEIW 703


>gi|326935721|ref|XP_003213916.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like, partial
           [Meleagris gallopavo]
          Length = 416

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 30/266 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD  AR+ RL   + L+  GTDE+G      A   
Sbjct: 19  VLITSALPYVNNVPHLGNIIGCVLSADAFARYCRLRNWNTLYVCGTDEYGTATETKAVEE 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    DIS+D F RTT  +     + +++++  +G + +    
Sbjct: 79  GLTPRQICDKYHAVHADIYRWFDISFDCFGRTTTPQQTAISQDIFQRLQARGFVLQDTVQ 138

Query: 126 GWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWME---------------- 161
             +    + +  D  V        Y+ A G   +     +  +E                
Sbjct: 139 QLHCAGCQRFLADRFVEGICPFCAYQEARGDQCDKCGKLINAVELKTPRCKLCGGSPAVR 198

Query: 162 -EEGYFFRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                F  L   +++L  + E+           R    S+++ GL+   ++R    WG  
Sbjct: 199 PTRHLFLDLPKLEERLQPWLENCWATGNWTANARYITRSWIRDGLRPRCITRD-LQWGTP 257

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTG 243
           +P D     + YVW DA   YL+ T 
Sbjct: 258 VPLDGFRDKVFYVWFDAPIGYLSITA 283


>gi|300788561|ref|YP_003768852.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299798075|gb|ADJ48450.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 873

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 21/265 (7%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAF-- 278
           DP  ++  W  +    ++T G+   P  S+  AKF+P  +   G DIL F  +    F  
Sbjct: 447 DPD-VLDTWFSSGLWPMSTLGW---PSSSEDLAKFYPTSVLSTGYDILFFWVVRMMMFGV 502

Query: 279 -LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             +    P    V+ HG I   +G+K+SKS GNVIDP+E ++  G DA R+ L R    G
Sbjct: 503 HQMDGKQPF-DHVYLHGLIRDAQGKKMSKSRGNVIDPLEWMDAYGADATRFTLARGANPG 561

Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            D    D+     R   +    + N  ++   M        +P+ G  TE+D  IL    
Sbjct: 562 ADMALADEWAAGSR---NFCTKLWN-ATKFAMMNGASVAAPLPSAGELTEADRWILGRLG 617

Query: 396 RVLQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            ++ E+    E+ Q   +  AL Q  +     D Y +  K  +L + +  RA+    V  
Sbjct: 618 ALVSEVDGLFEDFQFAKVAGALYQ-FTWNELCDWYLELAKV-QLYQGDDARAAATRSVLG 675

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+  +  LL  F+P +  K++  L
Sbjct: 676 HVLDTVLRLLHPFIPFITEKLWTAL 700


>gi|297529198|ref|YP_003670473.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252450|gb|ADI25896.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 880

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 47/309 (15%)

Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239
           ++D  +SR+ + WG +IP                         DP  ++  W  +     
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPF 460

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ D       +++P D+ V G DI+ F    + +     +   P  K V  HG + 
Sbjct: 461 STMGWPDVESPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF-KDVLIHGLVR 519

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN
Sbjct: 520 DAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FAN 577

Query: 357 GIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            I N    +    L +  GM    +   G  T +D  IL+  +  +  + +  +      
Sbjct: 578 KIWN----ASRFALMNMGGMTYEELDLSGEKTVADHWILTRLNETIDTVTKLAEKYEFGE 633

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468
           A   + + + +   D Y +  K   L     D A+  T   V   V+     LL  F+P 
Sbjct: 634 AGRTLYNFIWDDLCDWYIEMAK---LPLYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPF 690

Query: 469 LANKIFDIL 477
           +  +I+  L
Sbjct: 691 ITEEIWQNL 699



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++            T  + ++ + + R     L +   D+ R   T ++      R 
Sbjct: 103 QQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  +  KG IY+G Y   W  +   A  + + VYK   G  Y+ ++
Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHLRY 208


>gi|315504173|ref|YP_004083060.1| valyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410792|gb|ADU08909.1| valyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 872

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 21/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NL 284
           ++  W  +     +T G+ +  PD   AKF+P  + V G DIL F       F L A + 
Sbjct: 450 VLDTWFSSGLWPFSTLGWPERTPD--LAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDG 507

Query: 285 PLPKKVFS-HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  V + HG +  + G+K+SKS GNV+DP++ I+  G DA R+ L R    G+D    
Sbjct: 508 VQPFDVVALHGMVRDEHGKKMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGQDVPVS 567

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           ++  +   N    N + N  +R   +     DG +P  G  +  D  ILS  + V  E+ 
Sbjct: 568 EEWCQGSRN--FCNKLWN-ATRFALLNGAHTDGPLPAAGDLSTVDRWILSRLAHVTAEVD 624

Query: 403 ENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           E  +        A+V  L+         D Y +  KP  L +  P  A     V   V+ 
Sbjct: 625 EQFEAY----EFAKVCDLLYHFAWDDVCDWYVELSKP-VLAEGGP-AADATRRVLGHVLD 678

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           QL  LL   +P + ++++  L
Sbjct: 679 QLLRLLHPVIPFVTDELWAAL 699


>gi|269837467|ref|YP_003319695.1| leucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786730|gb|ACZ38873.1| leucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 824

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 11/194 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  T   YP+   HIGH Y M  +D  ARF R+ G +VLF  G D  G     AA 
Sbjct: 40  RPKWYHLTMYPYPSGDLHIGHWYAMAPSDAAARFKRMSGYNVLFPMGFDAFGLPAENAAI 99

Query: 64  NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+     T   +++  R  R M  + D S +  + T    ++   +  + +    G  
Sbjct: 100 TRGIHPFKWTMDNIERMRRQLRSMGAMFDWSRE--VVTCLPDYYRWNQWFFLQFYKNGLA 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+     W+  +D+    +++V  G   +     +      + E +FFR++ Y ++LL++
Sbjct: 158 YRASAPVWWCPKDQTVLANEQVIDGRCERCGTEVYR----RDLEQWFFRITKYAEELLNF 213

Query: 180 YE-SHPEFILPIER 192
                PE ++ ++R
Sbjct: 214 DGIEWPERVMTMQR 227



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 36/243 (14%)

Query: 246 DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGF 295
           D P D     +W P D +  G +    H +Y   F        LL  + P   ++F+ G 
Sbjct: 523 DRPFDPDAIAYWTPVDQYTGGIEHATMHLMYARFFTKALRDLGLLPFDEPF-LRLFNQGI 581

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           IL +  EK+SKS GNV+DP +++ ++G D +R +L+      + G +   G+        
Sbjct: 582 ILGEDNEKMSKSRGNVVDPDDLVAQLGADTVRLYLMFIAPWEQGGPWSSRGIA------- 634

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G+   V R  +++ +  D   P  G   E+   +  +  R ++ + E++     +  +
Sbjct: 635 --GVERFVRRVWTIVTETAD--TPADGPDGEAAHKLRKITHRTIKAVTEDISTFQFNTMV 690

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A+++  V+E+    D     E+ +T   R         E +R L +LL    P LA +++
Sbjct: 691 ARLMEFVNELSSLRDT----EVVRTEAWR---------EAMRTLVLLLAPSTPYLAEELW 737

Query: 475 DIL 477
           + L
Sbjct: 738 ERL 740


>gi|297205794|ref|ZP_06923189.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148920|gb|EFH29218.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 883

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K L   ++  +     ER ++        + D  +SR+ + WG +IP   
Sbjct: 364 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 422

Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           +     MYV                    W  +     +T G+ D       +++P +  
Sbjct: 423 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFKRYFPTNAL 482

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 483 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 538

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L     
Sbjct: 539 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 595

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  +D+ I    +  ++E+
Sbjct: 596 PAHMPDVAKFDLADKWIFDRLNHTVKEV 623



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 29/170 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  I D L R  R+ G D L+  G D  G  IA  A+    
Sbjct: 43  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IAMQAKVEAK 100

Query: 68  TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105
             K  +D++        +   D  D                LD S + F  T +K     
Sbjct: 101 LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQH 154
            R ++ ++ ++G IY+G Y   +  + E   +D EV    D G +Y+ ++
Sbjct: 159 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHQDDKGAFYHVKY 208


>gi|116749515|ref|YP_846202.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|166231649|sp|A0LK15|SYL_SYNFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116698579|gb|ABK17767.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 829

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFLRMRGYNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A      +  +N    R     L  SYD   +F  T +  ++   ++ + K+ +KG  Y
Sbjct: 92  KAKTHPARWTYENIAYMRSQLKQLGFSYDWSREFA-TCDVSYYRWEQLFFLKMYEKGLAY 150

Query: 121 K-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           K   Y  W         N ++V  GA  +       PV   E E +FF+++ Y ++LL Y
Sbjct: 151 KRSAYVNWCGTCLTVLAN-EQVEGGACWRC----DQPVVQKEMEQWFFKITDYVEELLDY 205

Query: 180 YESHP 184
               P
Sbjct: 206 THRLP 210



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 38/250 (15%)

Query: 243 GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSH 293
           G LD P   K K+W P D ++ G +    H +Y   F+        L  + P  + + + 
Sbjct: 520 GPLDLP---KVKYWMPVDQYIGGIEHAVLHLLYSRFFVKVLRDMGALEVDEPF-RNLLTQ 575

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G ++  G K+SKS GNV+DP ++I+  G D +R F +      KD  +   G++      
Sbjct: 576 GMVIKDGAKMSKSKGNVVDPDDMIKAYGADTVRLFCLFASPPEKDLEWSDQGVE------ 629

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQ 408
              G    +SR   ++  + D +   P     GA  E  E++     + ++++ E+++++
Sbjct: 630 ---GSFRFLSRIWRLVSDNLDALRSAPRHNGGGALPEPLEALHRKTHQTIKKVTEDIRDR 686

Query: 409 L-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A+A ++ LV+++ +  +             RA  +  V  E +  L +L+    P
Sbjct: 687 FHFNTAIAAIMELVNQIYQVVEGG----------SRAGNIWPVVKEAVEALILLVSPMAP 736

Query: 468 KLANKIFDIL 477
            +A +I+  L
Sbjct: 737 HIAEEIWHEL 746


>gi|29377395|ref|NP_816549.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554378|ref|ZP_03984425.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|75541540|sp|Q82ZW6|SYV_ENTFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29344862|gb|AAO82619.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176497|gb|EEI57469.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315576283|gb|EFU88474.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582775|gb|EFU94966.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 880

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ +       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|284053184|ref|ZP_06383394.1| valyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291568160|dbj|BAI90432.1| valyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 908

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 25/291 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
           +F  G+K+  DP  ++  W  +     +T G+ +        ++P +    G DI+ F  
Sbjct: 453 SFGEGVKLQQDPD-VLDTWFSSGLWPFSTLGWPEK-TADLQTYYPTNTLSTGFDIIFF-- 508

Query: 273 IYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
             W A +       +  +P  + V+ HG IL   G+K+SKS GN IDP+ +I++ G DAL
Sbjct: 509 --WVARMTMMGGYFTDKMPF-QTVYIHGLILDENGKKMSKSAGNGIDPLLLIDKYGTDAL 565

Query: 326 RYFLVRE-IACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP----T 379
           RY L+RE I  G+D   + D  K +  + + +    N +  +   +L +  G  P    T
Sbjct: 566 RYTLMREVIGAGQDIRLEYDRSKDESPSVEASRNFTNKLWNAARFVLMNLKGQTPAQLGT 625

Query: 380 PG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
           P       SD  ILS  ++ +++  + M    +  A   +   +     D Y +  K + 
Sbjct: 626 PNLEELELSDRWILSRFNQTVKQTCDYMNAYSLGEAAKGLYEFIWGDFCDWYIELAK-YR 684

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           L+            V   ++  +  LL  F+P +  +I+  L    E  C 
Sbjct: 685 LQGDGGVSQKVAQQVLAYILEGILKLLHPFMPHITEEIWHTLTQTGEQDCL 735



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+   + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFNNSLIDALIRYHRMRGYNTLYLPGTD 87


>gi|94986050|ref|YP_605414.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94556331|gb|ABF46245.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 925

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 40/240 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F  +    +++L+  ++    I P ER  +V      G++D ++SR+ + 
Sbjct: 377 PVEPIVSTQWFVHMKPLAERVLAGLDAGEIHITP-ERYTKVNRDWLLGIRDWNISRQLW- 434

Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243
           WG +IP                       DP+Y          +   W  +     +T G
Sbjct: 435 WGHQIPAWYDEEGNVYVPDLENPDLDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 494

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
           + D       KF+P  + V G DIL F    +    + L+   P    V  HG  L  KG
Sbjct: 495 WPDTDSEDYRKFYPTQVLVTGYDILFFWVARMEMAGYALTGEAPF-STVMLHGLYLDAKG 553

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN IDP+E+ +E GVDA R+        G+D  +D    ++  N   AN + N
Sbjct: 554 QKMSKSKGNGIDPLELFDEYGVDACRFAFTSLATGGQDIRHDPRRFEQGRN--FANKLWN 611



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA +  + D L R+ R+ G + L+  GTD           +AG++T+V V++ 
Sbjct: 68  HLGHALDNTLIDTLIRYKRMQGFEALYLPGTD-----------HAGISTQVVVERQ 112


>gi|282900149|ref|ZP_06308106.1| Valyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195031|gb|EFA69971.1| Valyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1051

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 162/392 (41%), Gaps = 66/392 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           PV+ +    +F ++    DK L +   E+ PEF+   +R  +V       L+D  +SR+ 
Sbjct: 370 PVEPLLSTQWFVKIRPLADKTLEFLDQENSPEFV--PQRWGKVYRDWLVNLRDWCISRQL 427

Query: 214 FDWGIKIP--------------DDPQYIMYVWIDALTNY----LTTTGYLDNPD------ 249
           + WG +IP                P ++ +  ++AL             + +PD      
Sbjct: 428 W-WGHQIPAWYAVSETGGEITDSTPYFVAHNEMEALEKARALGCENVQLIQDPDVLDTWF 486

Query: 250 ----------GSKAK------FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLP 287
                     G   K      ++P    V G DI+ F    W A +       +  +P  
Sbjct: 487 SSGLWPFSTLGWPEKTQDLDTYYPTTTLVTGFDIIFF----WVARMTMMAGHFTGKMPF- 541

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDG 345
           + V+ HG +     +K+SKS  N IDP+ +I++ G DALRY LV+E +  G+D   + D 
Sbjct: 542 QTVYIHGLVRDENNKKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDR 601

Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQE 400
            K + V+ + +    N +  +   ++ + +G  P     P     SD  ILS   +V+++
Sbjct: 602 KKDESVSVEASRNFANKLWNASRFVMMNLEGQTPEQLGEPQGIELSDRWILSRYHQVVKQ 661

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              ++ N  +  A   +   +     D Y +  K    K  +P    T   +   V+  +
Sbjct: 662 TNNHIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQKDADPVFRKTAQQILALVLSGV 721

Query: 459 AILLQAFVPKLANKIFDILFVAD-ENRCFQSL 489
             LL  F+P +  +I+  L     +NR F +L
Sbjct: 722 LKLLHPFMPHITEEIWQTLTQQPIDNRQFLAL 753



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
           H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 71  HMGHAFESALIDALVRYHRMKGRNTLWLPGTD 102


>gi|237756572|ref|ZP_04585094.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691272|gb|EEP60358.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 768

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 24/263 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+    D   A F+P  L V G DI+ F    W A ++      
Sbjct: 324 VLDTWFSSALWPFGTLGWPSRKDDL-AVFYPTSLLVTGFDIIFF----WVARMIMMGTKF 378

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           + ++P  K V+ H  +   KGEK+SK+ GNVIDP+E+ E+ G DALR+ L    A G+D 
Sbjct: 379 TNDVPF-KDVYIHALVRDEKGEKMSKTKGNVIDPLEMAEKYGSDALRFTLASLAAQGRDI 437

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSR 396
                  +KR+      +N I N  S+ V +  +DYDG       + +  D  IL+  ++
Sbjct: 438 RLS----EKRIEGYKHFSNKIWN-ASKFVLINSEDYDGKANLESLSLSIEDYWILTKLNK 492

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++   + ++N   +     +         D Y +  K   + K +P+   T L V   V
Sbjct: 493 TIENSTKELENYRYNEYANILYDFFWHDYCDWYIELSKE-RIYKGSPEEKKTALTVLNFV 551

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +R+   LL   +P +  +I+  L
Sbjct: 552 LRESLKLLHPIMPYITEEIYGYL 574


>gi|154710435|gb|ABS84280.1| TP0798-like protein [Treponema paraluiscuniculi]
          Length = 122

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 55/111 (49%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+ A+ Y N  PH+G+  + + ADV ARF R+ G    F  GTDE+G      A   G++
Sbjct: 6   ITAALPYVNNVPHLGNLIQGLSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQGLS 65

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                       RD+    D+S+D F RTT   H +  + L++ +  +G I
Sbjct: 66  PAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFI 116


>gi|194476850|ref|YP_002049029.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora]
 gi|171191857|gb|ACB42819.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora]
          Length = 916

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 22/299 (7%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           ++ ++ L  +R+ +   I I  D + ++  W  +     +T G+ D+       ++P   
Sbjct: 446 RTSVEALEQARECYGDKIVINQD-EDVLDTWFSSGLWPFSTLGWPDSNSADFQCWYPNST 504

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKGE-KISKSLGNVIDPIEVIE 318
            V G DI+ F          S    +P K+V+ HG +  +   K+SKS+GN IDP+ +I+
Sbjct: 505 LVTGFDIIFFWVARMTMMASSFTKKMPFKEVYIHGLVRDENNCKMSKSMGNGIDPLVLID 564

Query: 319 EVGVDALRYFLVREIA-CGKDGFYD-----KDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             G DALR+ LV E+A  G+D   D        LK   + + AN I N   R   M L D
Sbjct: 565 RYGADALRFALVWEVAGAGQDIRLDYNRNENTSLKVESSRNFANKIWN-ACRFTLMNLND 623

Query: 373 YDGM---IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            +      P P     SD  ILS  ++V  E+ E   +  +  A   +         D +
Sbjct: 624 QNTNNLGTPDPRQLKLSDRWILSRLAQVNIEMSEYYSSYNLGEAAKAIYEFTWNDLCDWF 683

Query: 428 FDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K    ++ N D  +   T   V + V+ Q+ ++L   +P +  +++  L     N
Sbjct: 684 IELAK----RRINSDDYTLRQTTFQVLMIVLEQILVMLHPLMPHITEELWHGLMRVPAN 738


>gi|157376611|ref|YP_001475211.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083149|sp|A8FZ10|SYL_SHESH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157318985|gb|ABV38083.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 863

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 17/242 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      V+  E   +F +++ Y D+LL  
Sbjct: 150 YKKTASVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYADELLKD 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I     G+ D   S +TFD     PD    + YV I
Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMT-FGVVD---SEETFDIYTTRPDTVMGVTYVAI 261

Query: 233 DA 234
            A
Sbjct: 262 AA 263


>gi|15615600|ref|NP_243904.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|12585349|sp|Q9K8G8|SYV_BACHD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10175660|dbj|BAB06757.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 880

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 44/231 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQYI---------MYVWIDALTNYLT 240
           ++D  +SR+ + WG +IP              + PQ I         +  W  +     +
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEVYVGHEAPQDIDNWKQDEDVLDTWFSSALWPFS 461

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGF 295
           T G+ D       +++  D  V G DI+ F    W + ++   L     P  K V  HG 
Sbjct: 462 TMGWPDEEAPDYKRYYSTDALVTGYDIIFF----WVSRMIFQGLEFTGQPPFKDVLIHGL 517

Query: 296 ILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +   +G+K+SKSLGN +DP+EVI++ G DALR+FL    + G D  +  + ++   N   
Sbjct: 518 VRDAEGQKMSKSLGNGVDPMEVIDKYGADALRFFLATGSSPGNDLRFYWEKVESTWN--- 574

Query: 355 ANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEI 401
               GN +  +    L + DGM    I   G  + +D+ IL+     ++ +
Sbjct: 575 ---FGNKIWNASRFALMNMDGMSYDEIDLTGEKSIADQWILTRLQETIETV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L+R  R+ G D L+  G D  G      A  A V
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTALQDILSRLKRMQGYDTLWLPGMDHAG-----IATQAKV 97

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F +        Y DFIR                 T ++    
Sbjct: 98  EAKLREEGKSRYDLGREAFVEKTWEWKEEYADFIRQQWAKLGLSLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++ K+ +KG IY+G Y   W  +   A  + + +YK   G +Y+ ++
Sbjct: 158 AVREVFVKLYEKGLIYRGEYIINWDPVTKTALSDIEVIYKDVQGYFYHMKY 208


>gi|88809487|ref|ZP_01124995.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786706|gb|EAR17865.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 979

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 27/270 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    +   A   +  +
Sbjct: 526 VLDTWFSSGLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEM 585

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYD 342
           P  + V+ HG +   +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D
Sbjct: 586 PF-QDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLD 644

Query: 343 KD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCS 395
            D         + +    N +  +    L +  G  P       P A   +D  ILS  +
Sbjct: 645 YDRKTDTSATVEASRNFANKLWNATRFALMNLGGETPAQLGEPIPEALQLADRWILSRLA 704

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST------- 446
           RV +E  E   +  +  A   +         D Y +  K    ++ NP    +       
Sbjct: 705 RVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSK----RRLNPGENPSAEALADQ 760

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIF 474
                V  +VI Q+ ++L   +P L  +++
Sbjct: 761 RVAKQVLAKVISQMHLMLHPLMPHLTEELW 790


>gi|237743264|ref|ZP_04573745.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433043|gb|EEO43255.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 887

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 18/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL---YVTVEVI 455
           +++ ++   +  A   V   +     D Y +  K   L   + D+  + L   Y+   ++
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTIL 684

Query: 456 RQLAILLQAFVPKLANKIF 474
            Q   LL  F+P +  +I+
Sbjct: 685 EQGLRLLHPFMPFITEEIW 703


>gi|322514586|ref|ZP_08067619.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119525|gb|EFX91612.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 861

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + K+  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTKLYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL++ +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNHLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|262066120|ref|ZP_06025732.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380215|gb|EFE87733.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 887

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 22/261 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F +    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PERTKELDLFYPTSTLVTGADIIFFWVARMIMFGMYELK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + G+D  + 
Sbjct: 509 KIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
            D L   +  + AN I N  +R V M L+ +D   +  T   +   D+ I+S  +   ++
Sbjct: 569 TDLLG--MGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISRLNETAKD 625

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVE 453
           +++ ++   +  A   V   +     D Y +  K   ++  N D        T  Y+   
Sbjct: 626 VKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAK---IRLYNDDEDKKISKLTAQYMLWT 682

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           ++ Q   LL  F+P +  +I+
Sbjct: 683 ILEQGLRLLHPFMPFITEEIW 703


>gi|228993197|ref|ZP_04153118.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999247|ref|ZP_04158827.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760444|gb|EEM09410.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766523|gb|EEM15165.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 881

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 19/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++  D  V G DI+ F    W + ++   L  
Sbjct: 449 VLDTWFSSALWPFSTLGWPNEDAEDFKRYYSTDALVTGYDIIFF----WVSRMIFQGLEF 504

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN IDP++VI++ G DA+R+FL    A G+D  
Sbjct: 505 TGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVL 398
           +  + ++   N    N I N  SR V M + D  Y+  I   G  + +D+ IL+  +  +
Sbjct: 565 FSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYED-IDLTGEKSVADKWILTRLNETI 620

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + +  NM       A   + + + +   D Y +  K   L   +     T   +   V+ 
Sbjct: 621 ESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKL-PLYGEDEVAKKTTRSILAYVLD 679

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q   LL  F+P +  KI+  L
Sbjct: 680 QTMRLLHPFMPFVTEKIWQHL 700



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A
Sbjct: 38  EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQA 95

Query: 63  QNAGVTTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRH 102
           +  G   +  +   D     F + A      Y   IR                 T ++  
Sbjct: 96  KVEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            D    ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 156 SDAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEIQGAFYHMNY 208


>gi|148927968|ref|ZP_01811369.1| aminoacyl-tRNA synthetase, class Ia [candidate division TM7
           genomosp. GTL1]
 gi|147886686|gb|EDK72255.1| aminoacyl-tRNA synthetase, class Ia [candidate division TM7
           genomosp. GTL1]
          Length = 629

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 59/311 (18%)

Query: 204 LKDLSLSRKTFDWGIKIP-----DDPQYIMY------------------------VWIDA 234
           L+D +LSR+   WGI IP     D+P   ++                         W  +
Sbjct: 177 LRDWNLSRQ-IPWGIPIPAFQNIDNPDDWIFDSRVDRETIEVGGYTYKREEDTFDTWFSS 235

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KK 289
                 TT YL+   G  +KF+P D+   G D+L      W A ++   L +      K 
Sbjct: 236 GQWPFITTDYLEG--GELSKFYPTDMMETGHDLLD----RWVARMIMLGLYMTDKVPFKN 289

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           V+ HG +L + G+K+SKS GNVI+P+++I + G DA R  ++   + G++  +     K 
Sbjct: 290 VYMHGMVLDEHGQKMSKSKGNVINPMDIINKYGSDAFRLGIIASRSAGQNQAFST--TKV 347

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
               + AN + N+       + + +    P P   T +D  I+   +   +EI   + + 
Sbjct: 348 VAGRNFANKLWNIARFIEDRVGEKFKNRAPEPQ--TIADHWIIRELNTASEEIDRLLSDY 405

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               A   V   + +   D Y +A K    ++ NP   + VL  +++       L   F 
Sbjct: 406 RFAEATEVVYHTIWDNVADWYVEASK----RQNNPGMLAWVLETSLK-------LAHLFA 454

Query: 467 PKLANKIFDIL 477
           P +   I++ L
Sbjct: 455 PFVTETIWETL 465


>gi|74318463|ref|YP_316203.1| leucyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123758998|sp|Q3SG58|SYL_THIDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74057958|gb|AAZ98398.1| leucyl-tRNA synthetase, class Ia [Thiobacillus denitrificans ATCC
           25259]
          Length = 857

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 12/189 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+ + H+GH     I DVLAR+H L G +V+   G D  G     AA
Sbjct: 31  DRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARYHALRGFNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N  + R     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IANGVPPAQWTYANIDHMRTQLQALGFAIDWSRELATCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P+       YFFR++ Y D+LL
Sbjct: 151 KKMATVNWDPVDQTVLANEQVIDGRGWRSGALVEKRDIPM-------YFFRITQYADELL 203

Query: 178 SYYESHPEF 186
           S  ++ P +
Sbjct: 204 SGLDTLPGW 212


>gi|229006794|ref|ZP_04164427.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754416|gb|EEM03828.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 867

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 19/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++  D  V G DI+ F    W + ++   L  
Sbjct: 435 VLDTWFSSALWPFSTLGWPNEDAEDFKRYYSTDALVTGYDIIFF----WVSRMIFQGLEF 490

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN IDP++VI++ G DA+R+FL    A G+D  
Sbjct: 491 TGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTGSAPGQDLR 550

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVL 398
           +  + ++   N    N I N  SR V M + D  Y+  I   G  + +D+ IL+  +  +
Sbjct: 551 FSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYED-IDLTGEKSVADKWILTRLNETI 606

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + +  NM       A   + + + +   D Y +  K   L   +     T   +   V+ 
Sbjct: 607 ESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKL-PLYGEDEVAKKTTRSILAYVLD 665

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q   LL  F+P +  KI+  L
Sbjct: 666 QTMRLLHPFMPFVTEKIWQHL 686



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G  IA  A
Sbjct: 24  EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAG--IATQA 81

Query: 63  QNAGVTTKVFV---DQNSRNFRDMADVLDISYDDFIR-----------------TTEKRH 102
           +  G   +  +   D     F + A      Y   IR                 T ++  
Sbjct: 82  KVEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGL 141

Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            D    ++ ++ +KG IY+G Y   W      A  + + ++K   G +Y+  +
Sbjct: 142 SDAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIHKEIQGAFYHMNY 194


>gi|119385062|ref|YP_916118.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119374829|gb|ABL70422.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 1030

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 30/167 (17%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA------LTNYL 239
           ++ +  R   I     GL D +L++           DP  ++Y VW DA       ++ L
Sbjct: 568 VIEVADREAAIDAFAQGLADYNLTQ-----------DPTRLVYPVWRDADVLDTWFSSGL 616

Query: 240 TTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFS 292
              G L  P+ +    K++P  + V G DI+ F    W A ++   L +      + V+ 
Sbjct: 617 WPIGTLGWPEDTTELRKYFPTSVLVTGFDIIFF----WVARMMMMQLAVVGQVPFRTVYV 672

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           HG +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D
Sbjct: 673 HGLVRDEKGAKMSKSKGNVIDPLTLIDEYGADALRFTLTSMAAMGRD 719



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     HIGHA    + D+L R+HR+ G D L+  G D           +AG+
Sbjct: 40 SVVIPPPNVTGSLHIGHALNNTLQDILVRWHRMRGFDTLWQPGQD-----------HAGI 88

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 89 ATQMVVER 96


>gi|253575687|ref|ZP_04853023.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845025|gb|EES73037.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 891

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 16/183 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P  +   G DI+ F    W A ++  +L  
Sbjct: 459 VLDTWFSSALWPFSTLGWPDEDSADLKRYFPTSVLSTGYDIIYF----WVARMIFTSLEF 514

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DPIEVIE+ G DA+RY L      G+D  
Sbjct: 515 TGQVPFKDVLIHGLVRDSEGRKMSKSLGNGVDPIEVIEKYGADAMRYMLSTSNTPGQDLR 574

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVL 398
           +  + +++  N   AN I N  SR   M L+   Y+  I   G  + +D  IL   +   
Sbjct: 575 FRWERVEQARN--FANKIWN-ASRFALMNLEGVKYED-IDISGELSTADRWILHRMNETA 630

Query: 399 QEI 401
           +EI
Sbjct: 631 KEI 633



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-----TKV 71
           HIGHA ++ + D+L R  R+ G D L+  G D  G     ++ +  +  GV+      + 
Sbjct: 62  HIGHALDLTLQDILTRTKRMQGYDALWLPGMDHAGIATQTRVEQRLREQGVSRYDLGREK 121

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F++Q               +  M   LD S + F  T ++      R ++ K+ +KG IY
Sbjct: 122 FLEQVWAWKDQYAGTIHEQWAKMGASLDYSRERF--TLDEGLSQAVREVFVKLYEKGLIY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G Y   +        +D EV YK  +G  Y+ Q+
Sbjct: 180 RGKYIINWDPAARTALSDIEVEYKEVNGHLYHLQY 214


>gi|163752480|ref|ZP_02159669.1| leucyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327624|gb|EDP98819.1| leucyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 863

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 18/256 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVI---DGCCWRCD-TVVEQKEIPQWFIKITEYADELLTD 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I      +     S ++FD     PD    + YV I
Sbjct: 206 LDQLDEWPEQVKTMQRNWIGRSEGIEMTFKVVD----SEESFDIYTTRPDTVMGVTYVAI 261

Query: 233 DALTNYLTTTGYLDNP 248
            A  + L      DNP
Sbjct: 262 -AAGHPLAEQAAADNP 276


>gi|156603749|ref|XP_001618894.1| hypothetical protein NEMVEDRAFT_v1g152996 [Nematostella vectensis]
 gi|156200817|gb|EDO26794.1| predicted protein [Nematostella vectensis]
          Length = 673

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 31/265 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANL- 284
           ++  W  +    +   G+ +NPD  + K++ P    V   +I+ F    W A +  A   
Sbjct: 377 VLDTWFSSWLWPMQVFGWNENPDNEELKYYYPTKTLVTAPEIIFF----WVARMAMAGYE 432

Query: 285 -----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                P  K  F+      +G K+SK LGN  D + +IEE G DA+R+ ++     G D 
Sbjct: 433 YLGQKPFDKVYFTGIVRDKQGRKMSKQLGNSPDLLALIEEHGADAVRFSVMISSPAGNDL 492

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL- 398
            YD+  L++  N   +N + N +      ++K ++G      A  E   ++  +  RV  
Sbjct: 493 LYDESSLEQGRN--FSNKMWNALK-----LIKSWEGRTTKDVAIGEQQFAVDWMEQRVAK 545

Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LYV-TV 452
             Q+I E M++  +   L  + SL+      +D    W L+   P + +++   LY  TV
Sbjct: 546 ASQQIEELMKDFRLSEGLKTIYSLI------WDDFCSWYLEWVKPAQEASMSQELYERTV 599

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
               QL  LL  ++P +  +++ ++
Sbjct: 600 ATFEQLLQLLHPYMPFVTEEMYHLM 624


>gi|320187432|gb|EFW62122.1| Methionyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 349

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGI 358
           G K+SKS G  I     +     D+LRY+   +++   D    + +   +RVNAD+ N +
Sbjct: 3   GAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKV 62

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            NL SR+   I K +DG++ +  A    D  +    +   + I E  +++   +A+ +++
Sbjct: 63  VNLASRNAGFINKRFDGVLASELA----DPQLYKTFTDAAEVIGEAWESREFGKAVREIM 118

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANK 472
           +L    +RY D Q PW + K     A    +  + + + R L   L+  +PKL  +
Sbjct: 119 ALADLANRYVDEQAPWVVAKQESRDADLQAICSMGINLFRVLMTYLKPVLPKLTER 174


>gi|300811354|ref|ZP_07091851.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497718|gb|EFK32743.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 879

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 28/200 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +         +R    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D  Q ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478

Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + +   +   P    V  HG I   +G K+SKSLGN IDP+++I+
Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDIID 537

Query: 319 EVGVDALRYFLVREIACGKD 338
           + G DALR+FL+   A G+D
Sbjct: 538 KYGADALRWFLLNGTAPGQD 557



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 24/137 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98

Query: 64  NAGVT----------TKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+           KV      + +     ++ +   LD S + F  T +K      R
Sbjct: 99  EQGVSRYDLGREKFMEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY 124
            ++ ++ ++G IY+G Y
Sbjct: 157 RVFVQLYNEGLIYRGEY 173


>gi|226294727|gb|EEH50147.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 972

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI     YP+   H+GH     IAD+LARF  + G DVL   G D  G     AA 
Sbjct: 67  KEKAYILAMFPYPSGTLHMGHVRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAAI 126

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G+    +  QN  N ++    +   +D   + +  + + +  T R L+  +  +G  Y
Sbjct: 127 ERGIDPAQWTMQNIANMKEQLRAIGAHFDWNRELMTCSPEFYKHTQR-LFLMLYGRGLAY 185

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           +      Y   D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL   
Sbjct: 186 QAKALVNYDPVDKTVLANEQV--NANGCSWRSGAK-VKKVELKQWFFRITAFKEALLKDL 242

Query: 178 -SYYESHPEFILPIER 192
            +  +  PE +L ++R
Sbjct: 243 DALADGWPERVLSMQR 258


>gi|67906490|gb|AAY82597.1| predicted leucyl-tRNA synthetase LeuS [uncultured bacterium
           MedeBAC35C06]
          Length = 804

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 6/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y  +   YP+ + H+GH     I DV++R+ R+   +V    G D  G     AA
Sbjct: 30  KREKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYKRMQNFNVFQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V+ + +   N  N +   + L +SYD    ++T +  ++   ++++ K+ +KG +Y
Sbjct: 90  IANEVSPEEWTKSNIDNMKSQLNSLGLSYDWSKELQTCDSDYYKWEQLIFTKLFEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K      +   DE    +++V  G  G    A+   V+  E + +F +++ Y D+LL
Sbjct: 150 KKKSMVNWDPVDETVLANEQVIDGK-GWRSGAK---VEIKEIDQWFIKITKYADELL 202



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 39/249 (15%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
             +W P DL++ G +    H +Y   F        L+  + P  KK+ + G +L  G K+
Sbjct: 506 TNYWLPVDLYIGGIEHAILHLLYSRFFHKALRDLGLVDGDEPF-KKLLTQGMVLKDGAKM 564

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP   I++ G D +R +++      +   +    ++               S
Sbjct: 565 SKSKGNTVDPQSFIDKYGADTIRLYMMFTAPPEQSLEWSDKSVEG-------------AS 611

Query: 364 RSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVI 418
           R +  +    DG+    IP P  F++ ++ + +     ++++ ++ + +   + A+A ++
Sbjct: 612 RFLKRLWNLCDGLKYEDIPEPKNFSQEEKELRNKTHLTIKKVTDDFETRYAFNTAIASIM 671

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++ + + F             D + +  +   E +  +   L    P +  +I+   +
Sbjct: 672 ELLNSIPKSF----------VESDASPSQKFCLQEAVISIVQCLFPIAPHICEQIWCNFY 721

Query: 479 VADENRCFQ 487
              +N C +
Sbjct: 722 DGSQN-CIE 729


>gi|282856769|ref|ZP_06266030.1| valine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585392|gb|EFB90699.1| valine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 901

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 54/313 (17%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDA 234
           G++D  +SR+ + WG +IP               DP              + ++  W  +
Sbjct: 415 GVRDWCISRQLW-WGHRIPAWTCEDCGHIVVAEHDPDCCPKCGSRKLKQDEDVLDTWFSS 473

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KK 289
                +T G+ ++ +  +  F+P  + V G DI+ F    W + ++   L     +P + 
Sbjct: 474 ALWPFSTMGWPEDTEELRY-FYPTSVMVTGFDIIFF----WVSRMIMMGLEFMDEVPFRD 528

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD---GFYDKDG 345
           +F H  +   KG K+SKSLGN IDPI++I   G DALR+ +      G+D   G    + 
Sbjct: 529 IFIHALVRDEKGRKMSKSLGNGIDPIDMINLYGADALRFTVAALTVQGRDILLGPAKIES 588

Query: 346 LKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            K+ +N      I N  SR   M L  +D++G  P P      D  IL    R+   + +
Sbjct: 589 YKRFINK-----IWN-ASRFALMNLGDEDHEGQ-PDPKRMRLHDRWILERLRRLDDVVTK 641

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++    I  A  ++   +     D Y +  KP       P+R  T   V + V R +  L
Sbjct: 642 DIDGYFIGEAARELYEFMWGDFCDWYIELSKPALYGDEGPERQKTTKRVLLCVFRDVLRL 701

Query: 462 LQAFVPKLANKIF 474
           L  F P +  +++
Sbjct: 702 LHPFTPFVTEELW 714



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 24/159 (15%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHAY+    D+LAR+ R  G  VL+  GTD  G       
Sbjct: 38  EKKAFSIVLPPPNVTGALHMGHAYDHTFQDILARYKRARGYSVLWLPGTDHAGIATQNVV 97

Query: 56  -QKIAK-AAQNAGVTTKVFV-----------DQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            +++AK       +  + FV           D+     + + D  D   + F  T ++  
Sbjct: 98  ERRLAKEGTSRRALGREAFVKRTWEWKEEYRDRIVNQMKSLGDSCDWKRERF--TMDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               R ++ ++ +KG IYKG Y   +  R     +D EV
Sbjct: 156 SKAVRTVFCRLYEKGLIYKGKYIVNWCPRCHTALSDIEV 194


>gi|309806731|ref|ZP_07700726.1| methionine--tRNA ligase domain protein [Lactobacillus iners
          LactinV 03V1-b]
 gi|308166911|gb|EFO69095.1| methionine--tRNA ligase domain protein [Lactobacillus iners
          LactinV 03V1-b]
          Length = 62

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 41/62 (66%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1  MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61 AA 62
           +
Sbjct: 61 KS 62


>gi|57234777|ref|YP_181174.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|90103540|sp|Q3Z9C5|SYV_DEHE1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57225225|gb|AAW40282.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 880

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 44/281 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F ++       L    S    ILP ER  +V       ++D  +SR+ + WG +
Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFTKVYQNWMENIRDWCISRQLW-WGHR 418

Query: 220 IP-------------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           IP             +DP                ++  W  +     +T G+ D  +  K
Sbjct: 419 IPVWYCPCGEMIVSKEDPTACPKCGSTKLEQDPDVLDTWFSSGLWPHSTLGWPDQTEDLK 478

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISKS 306
            +F+P  +     DI+ F    W A ++   +     +P + V+ HG I   KGEK+SK+
Sbjct: 479 -RFYPGSVLETAYDIIFF----WVARMIVMGIEDMKEVPFRTVYLHGLIRDDKGEKMSKT 533

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVIDP++VI++ G DALR+ +    + G D    +  L+   N    N + N  SR V
Sbjct: 534 KGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FVNKLWN-ASRFV 590

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            M L +   ++P  G   E D  ILS  +RV  ++   M+ 
Sbjct: 591 IMNLGEEKELLPEAGLPLE-DRWILSRMNRVTADVIRLMEE 630


>gi|145223217|ref|YP_001133895.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315443675|ref|YP_004076554.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215703|gb|ABP45107.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261978|gb|ADT98719.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 900

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 41/288 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D+     AKF+P  + V G DIL     +W A ++  
Sbjct: 457 DPD-VLDTWFSSALWPFSTMGWPDHTP-ELAKFYPTTVLVTGYDIL----FFWVARMMMF 510

Query: 281 -------------------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEV 320
                              S  +P  K VF HG I  + G K+SKS GN IDP++ +E  
Sbjct: 511 GTFVGGDPAIIGDGAAKKSSPQVPF-KNVFLHGLIRDEFGRKMSKSRGNGIDPLDWVETF 569

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L R  + G D    +D    R + + A  + N  +   +++       +P  
Sbjct: 570 GADALRFTLARGASPGGDLAIGED--HARASRNFATKLFN--ATRFALLNGASPAPLPPT 625

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              T++D  IL     V  ++   + N   +RA   +     +   D Y +  K  +L +
Sbjct: 626 AELTDADRWILGRLEEVRADVDAALDNYEFNRACEALYHFAWDEFCDWYLELAKV-QLGQ 684

Query: 439 TNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DILFVAD 481
            +P   R + VL   ++V+ +L   +  FV ++  K     + L +AD
Sbjct: 685 EDPQTARTTAVLATVLDVLLKLLHPVMPFVTEVLWKTLTGGESLVIAD 732



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + D L R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 68  HMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQSVVEKQLAADGKTKEDFGREL 127

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T +       R ++K++ D G IY
Sbjct: 128 FIDKVWDWKRESGGTIGAQMRRIGDGVDWSRDRF--TMDDTLSRAVRTIFKRLFDAGLIY 185

Query: 121 KG 122
           + 
Sbjct: 186 QA 187


>gi|242399103|ref|YP_002994527.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265496|gb|ACS90178.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 1070

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 182/392 (46%), Gaps = 29/392 (7%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFR 168
           KI ++ D     Y  W  +R    Y++  ++ G      Q Y     P+ W  E+G  + 
Sbjct: 429 KIIEENDKKVTWYPDWVKIR----YDNGVMHSGDWCISRQRYWGIPLPI-WSSEDGEIYI 483

Query: 169 LSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ 225
           +  +++  +L    E + E I   E  +E +  ++  L    L R   D + IK+ +   
Sbjct: 484 VGTFEELVELSVAIEVNGERIELPESYDEKLRVIEEKLGPEDLHRPYVDAFVIKVNNKEM 543

Query: 226 Y----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD-ILRFHAIYWPAFLL 280
                ++ VW D+      +  Y    D  + + WPAD  V G+D + ++      A ++
Sbjct: 544 KRVKDVLDVWFDSGIASWASLDYPRRKDLFE-RLWPADFIVEGEDQVTKWFYSQQAASVV 602

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           + +    +KV  HG++L  KG+K+SKSLGN+I P +VI++ G D  R++++      ++ 
Sbjct: 603 AFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEDVIQKDGRDPFRFYMLWATTPWENL 662

Query: 340 FYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSR 396
            +   GL +     + N + N+ +  S  M L ++D   + P    F E D+ ILS  + 
Sbjct: 663 RFSWKGLAQ--VKRMLNILWNVYILSSTYMSLDNFDPTKLNPEELPFREEDKWILSKVNN 720

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVLYVTV 452
           ++  + + +++  + +A   + + + E + R++     ++ W +++ +PD+ +   +   
Sbjct: 721 LISTVEDGLESFYLTKATRGIENFIIEDLSRWYVRVIRKRLW-VERDDPDKLAA-YWTLW 778

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++   L  L+  F P +  +I+  L     N+
Sbjct: 779 KIFDVLLRLMAPFTPYITEEIYQNLIRPFSNK 810


>gi|127513857|ref|YP_001095054.1| leucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166231642|sp|A3QH47|SYL_SHELP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126639152|gb|ABO24795.1| leucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 863

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 17/242 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AINNKTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      VQ  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTASVNWCPNDETVLANEQV---QDGCCWRCDTQVVQ-KEIPQWFIKITDYAEELLND 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I         +  S ++FD     PD    + YV I
Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VEGSDQSFDIYTTRPDTVMGVTYVAI 261

Query: 233 DA 234
            A
Sbjct: 262 AA 263


>gi|312880132|ref|ZP_07739932.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783423|gb|EFQ23821.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 888

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 25/261 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+F+P  L   G DI+     +W A ++   L  
Sbjct: 454 VLDTWFSSALWPFSTMGWPEKTP-ELARFYPTGLLTTGFDII----FFWVARMVMMGLEF 508

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++V      +H      KG+K+SKS GNVIDP++VI+  G DALR  L      G+D +
Sbjct: 509 MEEVPFRNVYIHALVRDEKGQKMSKSKGNVIDPLDVIDRFGADALRLTLASLTVQGRDIY 568

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCS 395
              + ++            N +  +    L + +G  P  G F E      D  IL+   
Sbjct: 569 LSTNKIES------YRFFLNKLWNASRFALLNLEGTDPN-GTFREEDLRLHDRWILTRRG 621

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            V++E+   ++      A   +   V     D Y +  KP         R +    V + 
Sbjct: 622 EVIEEMGRLLEGYFFGEAARLMYDFVWTELCDWYLELSKPALRGDEGESRKAATQGVLLS 681

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V R + +LL  FVP +  +++
Sbjct: 682 VFRDVLLLLHPFVPFVTEELW 702


>gi|284163384|ref|YP_003401663.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284013039|gb|ADB58990.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 1068

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 35/301 (11%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   K  + DL+++     +  ++PD    +  VW+D+      T  Y ++ D    +
Sbjct: 502 EDVDLHKDTVDDLTITEDGTTY-TRVPD----VFDVWLDSSVASWGTLNYPED-DSRFDE 555

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS----ANLPLPKKVFSHGF-ILHKGEKISKSLGN 309
            WPAD  +   D  R    +W    +S       P  ++V  HG  ++  G  +SKS   
Sbjct: 556 LWPADFILEAHDQTR--GWFWSQLGMSTAALGESPY-QEVLMHGHALMPDGRAMSKSKDI 612

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-M 368
           +IDP E I+  G D +R FL+     G+D  +D DG++   N      + N+    +  M
Sbjct: 613 LIDPHEAIDRHGRDVMRMFLLSNNPQGEDMRFDWDGMQTMENH--LRTLWNVFRFPLPYM 670

Query: 369 ILKDYDGMIPTPGAFTES-------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            L ++D   PT     +        DE +L+       E+ E  +++   RAL  +I  V
Sbjct: 671 RLDEFD---PTATTLEDVDSDLELIDEWVLARLQSTKAEMTEAFEDRRQDRALDALIEFV 727

Query: 422 SE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDI 476
            E V R++     ++ W  + +   RA+   Y T+ +V+R+   LL  + P ++ +I+  
Sbjct: 728 VEDVSRFYVQAVRERMWAEEDSGSKRAA---YATIYQVLRESVALLAPYAPFISEEIYGT 784

Query: 477 L 477
           L
Sbjct: 785 L 785



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 19/140 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQ 63
           E  +      Y +   H+G  +   + DV  RF R+ G DV    G D HG  I  +  +
Sbjct: 41  ESFFFVDGPPYTSGSAHMGTTWNKSLKDVYLRFLRMQGYDVTDRPGYDMHGLPIETRVEE 100

Query: 64  NAGVTTKVFVDQ-NSRNF----RDMADV-------------LDISYDDFIRTTEKRHHDT 105
             G   K  +++    NF    +D AD              + + +DD  RT E  + + 
Sbjct: 101 RLGFENKKDIEEFGEENFIQECKDYADEQLEGLQEDFQDFGVWMDWDDPYRTVEPEYMEA 160

Query: 106 CRILWKKISDKGDIYKGCYS 125
               + K +D+G + KG  S
Sbjct: 161 AWWGFSKAADRGLVEKGHRS 180


>gi|91762511|ref|ZP_01264476.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718313|gb|EAS84963.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 844

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 8/179 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K Y      YP+ + H+GH     I DVLAR+  L G +VL   G D  G     A
Sbjct: 29  KTRKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKMLQGYNVLHPMGWDSFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +  K + + N +  R     L +S  +D  I T  + ++   +  +  + DKG +
Sbjct: 89  ARQNNLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDYYKHQQEFFLDLYDKGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K  Y  W  + DE    +++V    DG+ + +    V+  +   +FF +S + + LL
Sbjct: 149 YRKENYVNWDPV-DETVLANEQV---VDGKGWRSGA-IVERKKLNQWFFNISKFSEDLL 202



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 34/190 (17%), Positives = 80/190 (42%), Gaps = 33/190 (17%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           S   I+   E +SKS  N IDP  +I+  G D++R F++ +    KD  +   G+    +
Sbjct: 605 SEKIIVGPTESMSKSKKNTIDPENIIKNYGADSVRLFILSDSPPEKDVQWSDQGM--LAS 662

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ----N 407
                 +  L S+ +  I  +  G        +E ++ +    ++++ +I +N++    N
Sbjct: 663 FKFVQKLWTLNSKILDKIKNNDQG--------SEGND-LTKFTNQLINKITQNLEKFHYN 713

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            ++         L+ E+D+    +                  + +E  +++ I++  F+P
Sbjct: 714 VIVANFYEMYNFLIKEIDKPIKKE------------------ILIENYKKILIVMNPFIP 755

Query: 468 KLANKIFDIL 477
             +N+  + +
Sbjct: 756 HFSNECLNTI 765


>gi|297526739|ref|YP_003668763.1| isoleucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255655|gb|ADI31864.1| isoleucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 1058

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 27/273 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +M VW D+  ++    G+   P+    K    D  V G D +R  F ++   
Sbjct: 519 RVPD----VMDVWFDSAISFYAAKGH---PEKLSLKDIILDFIVEGHDQIRGWFFSLLRA 571

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L   + P    V  HGF L + G ++ KSLGN +   E IE  G D LR F V +   
Sbjct: 572 GVLGFQSKPY-NTVLVHGFALDEHGREMHKSLGNYVGTDEAIERAGRDPLR-FWVSQNTV 629

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESIL 391
            +D  +   G+ + +  DL       V  S  M L  YD +      + E     D+ IL
Sbjct: 630 WEDLRFSWRGIDE-IRRDLGIAWNTFVFASTYMNLDKYDPLQHRIDDYREHLRYEDKWIL 688

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--AS 445
           S  + V++++ EN++   IH A   +   + E     Y    +P  W +++  PD+  A 
Sbjct: 689 SRINSVVKKVTENLEKYYIHEAARMLRKFIVEDVSHWYIRLIRPRVW-VEENTPDKLAAY 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           TVLY  +E   +   ++  F P LA KI+  +F
Sbjct: 748 TVLYYVLE---KWLRMMAPFTPFLAEKIYQEVF 777



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 15  YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF 72
           YP+ + PHIG A+   + D++ R+ R+ G +V    G D HG  I  K  Q  GV  K  
Sbjct: 52  YPSGEVPHIGTAWNKTLKDIVLRYKRMRGYNVFDRPGYDCHGLPIEVKIEQKLGVKVKRE 111

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           +++             I  D F+   +K   +  + L K   + G ++    + + +LRD
Sbjct: 112 IEEK------------IGVDKFVNECKKLALNNIKSLTKWFKELG-VFMDWENPYLTLRD 158

Query: 133 E 133
           E
Sbjct: 159 E 159


>gi|257417812|ref|ZP_05594806.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257159640|gb|EEU89600.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 880

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 45/345 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F ++    +K +   E+    EF  P  R N+        + D  +SR+ + WG +IP 
Sbjct: 363 WFVKMGPLAEKAMKNQETEDAVEFYPP--RFNQTFLRWMENVHDWVISRQLW-WGHQIPA 419

Query: 222 -------------DDP---------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P           ++  W  +     +T G+ +       +++P  
Sbjct: 420 WYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQRYFPTS 479

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
             V G DI+ F    + + +   +   P  + V  HG I   +G K+SKSLGN IDP++V
Sbjct: 480 TLVTGYDIIFFWVSRMIFQSLEFTGERPF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDV 538

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M   + +GM
Sbjct: 539 IEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ASRFVIM---NVEGM 592

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
               I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y + 
Sbjct: 593 TAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEM 652

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K   L   N     T   + V  + Q+  LL   +P +  +I++
Sbjct: 653 SKE-ILYGDNEVAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWE 696



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +   
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLA 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + FVDQ               +  M   LD S + F  T ++   +  R
Sbjct: 102 QQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERF--TLDEGLSEAVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++  + +K  IY+G Y   +  + +   +D EV +K  +G +Y+  +
Sbjct: 160 KVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIHKDIEGAFYHMSY 207


>gi|116513817|ref|YP_812723.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093132|gb|ABJ58285.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 879

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 28/200 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +         +R    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D  Q ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478

Query: 262 VIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    + + +   +   P    V  HG I   +G K+SKSLGN IDP++VI 
Sbjct: 479 VTGYDIIFFWVSRMIFQSLHFTGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPMDVIA 537

Query: 319 EVGVDALRYFLVREIACGKD 338
           + G DALR+FL+   A G+D
Sbjct: 538 KYGADALRWFLLNGTAPGQD 557



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 24/137 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      + FV++             R ++ +   LD S + F  T +K      R
Sbjct: 99  EQGVSRYDLGREKFVEKVWEWKDEYANIIKRQWQKLGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY 124
            ++ ++ ++G IY+G Y
Sbjct: 157 RVFVQLYNEGLIYRGEY 173


>gi|332186042|ref|ZP_08387788.1| valyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332013857|gb|EGI55916.1| valyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 890

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 22/277 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +      T G+ DN D + A  +P D+ + G DIL     +W 
Sbjct: 456 GVTLTRDPD-VLDTWFSSALWPFATLGWPDNGDKTLAGRYPNDVLISGFDIL----FFWD 510

Query: 277 AFLLSANL----PLP-KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   +     +P K ++ HG +    G K+SKS GN +DP+ +I++ G DALR+F+ 
Sbjct: 511 ARMMMQGIHFMEDVPFKTLYLHGLVRAADGSKMSKSKGNTVDPLGLIDQYGADALRFFMA 570

Query: 331 REIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
              + G+D   D    ++RV    + A  + N  +R           M+  P A    ++
Sbjct: 571 AMESQGRDIKMD----ERRVEGYRNFATKLWN-AARFAQANGIGASTMLEAPNATLAVNK 625

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            I++   + +Q +   + +     A   +   V     D Y +  KP  + +   +    
Sbjct: 626 WIIAETVKTVQAVDLALADYRFDGAANAIYQFVWSRFCDWYLELIKP--VLQGGEEGGEE 683

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              V   V+ Q+ +LL  F+P +  +++  +   D +
Sbjct: 684 TRAVAGWVLDQILVLLHPFMPFITEELWHAMGARDHD 720



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 31/96 (32%)

Query: 16  PNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           PNA+P              HIGHA +  + D+L R  RL G D L+  GTD         
Sbjct: 32  PNAEPWTIVNPPPNVTGNLHIGHALDNTLQDILVRHARLKGKDALWVVGTD--------- 82

Query: 62  AQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFI 95
             +AG+ T++ V++  N+R  +      D + D F+
Sbjct: 83  --HAGIATQMVVERQMNARGEKRT----DFTRDQFL 112


>gi|294142171|ref|YP_003558149.1| leucyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328640|dbj|BAJ03371.1| leucyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 864

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 18/255 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     AA 
Sbjct: 33  KEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQRLQGKNVLQPIGWDSFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 93  KNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLVYK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 153 KTSSVNWCPNDETVLANEQVI---DGCCWRCD-TVVEQKEIPQWFIKITEYADELLTDLD 208

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E I      +     S ++FD     PD    + YV I A
Sbjct: 209 QLDEWPEQVKTMQRNWIGRSEGIEMTFKVVD----SEESFDIYTTRPDTVMGVTYVAI-A 263

Query: 235 LTNYLTTTGYLDNPD 249
             + L     ++NP+
Sbjct: 264 AGHPLAAQAAVNNPE 278


>gi|257468336|ref|ZP_05632430.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062610|ref|ZP_07927095.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688286|gb|EFS25121.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 886

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F L    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELETFYPTSTLVTGADIIFFWVARMIMFGLYEMK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+ +IEE G DA+R+ ++   + G+D  + 
Sbjct: 509 EIPFKDVFFHGIVRDELGRKMSKSLGNSPDPLNLIEEFGADAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +  L+  +  + AN I N V+R V M L+ +D
Sbjct: 569 EKLLE--MGRNFANKIWN-VARFVIMNLEGFD 597


>gi|146304446|ref|YP_001191762.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145702696|gb|ABP95838.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 808

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 18/265 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VW+D+    L  +G+ +N     +K +PAD+ + G DI+R    Y  +   +L+ N+P  
Sbjct: 471 VWVDSSVTVLYLSGFYEN-KLRFSKTFPADVRLQGTDIIRTWLFYTFFRTLMLAGNVPF- 528

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V  HG +L   G ++SKS GN + P++ I+E G DA+R  L+ + + G D  +  D +
Sbjct: 529 KRVIVHGQVLGPDGTRMSKSKGNNVSPMDRIDEFGADAIRMTLL-DASIGDDFPFKWDTV 587

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           K +          N    +   I   +   +  P      D+ IL+     +++  +  +
Sbjct: 588 KGKKLLLQKL--WNASRLAYPFI---HGRKLEKPEVLHPIDQWILAKHKEFVEKAIQAYE 642

Query: 407 NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           NQ     L+ +     E   D Y +  K    +  + DR++T  Y    +++ L ILL  
Sbjct: 643 NQDFFVILSMLYEYFWETIADEYLELIK---HRLFSDDRSAT--YTLGRILKDLIILLHP 697

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
             P +  +I+ ++F   ++   ++L
Sbjct: 698 IAPHITEEIYSLIFGEKQSVLLETL 722



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           E+   +I T   + + + H+GHAY + IAD +ARF +L G +VLF  G D  G
Sbjct: 48  EKPVFFIDTPPPFTSGELHMGHAYWVTIADAMARFKKLQGYNVLFPQGWDTQG 100


>gi|126700875|ref|YP_001089772.1| valyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252312|emb|CAJ70153.1| valyl-tRNA synthetase [Clostridium difficile]
          Length = 888

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 23/258 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP-AFLLSANLPL 286
            W  +     +T G+   P+ ++A   ++P  + V G DI+ F  +    A +   N   
Sbjct: 454 TWFSSALWPFSTLGW---PNKTEALDYYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKP 510

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              V  HG +   +G K+SKSLGN IDP+E+IE+ G DALR+ L      G     D   
Sbjct: 511 FDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLT----TGNSPENDMRF 566

Query: 346 LKKRVN--ADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +RV    + AN + N  SR V M     I+K+           T +D+ I+S  + ++
Sbjct: 567 YMERVEFARNFANKLWN-ASRFVFMNIDEDIIKNMTRE-SVKEDLTLADKWIISRANNIV 624

Query: 399 QEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +E   NM    +  AL ++     SE  D Y +  KP  L   + +  S  LY    V+ 
Sbjct: 625 KEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLE 683

Query: 457 QLAILLQAFVPKLANKIF 474
           ++  LL  ++P +  +I+
Sbjct: 684 KILKLLHPYMPFITEEIY 701


>gi|170728031|ref|YP_001762057.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688645|sp|B1KDW0|SYL_SHEWM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169813378|gb|ACA87962.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 859

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 17/240 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNSSAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +      VQ  E   +F +++ Y D+LLS   
Sbjct: 152 KTASVNWCPNDETVLANEQV---QDGCCWRCDTEVVQ-KEIPQWFIKITDYADELLSDID 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E I         ++ S ++FD     PD    + YV I A
Sbjct: 208 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDESFDIYTTRPDTVMGVTYVAIAA 263


>gi|256787757|ref|ZP_05526188.1| valyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 777

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +    G+K+SKS GNV++P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFHTIALHGMVRDQNGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  + V+ E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEV 627


>gi|149181773|ref|ZP_01860264.1| valyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850514|gb|EDL64673.1| valyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 881

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P D  V G DI+ F    + +     +   
Sbjct: 448 VLDTWFSSALWPFSTMGWPDTEAEDFKRYYPTDALVTGYDIIGFWVSRMIFQGLEFTGTR 507

Query: 285 PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V  HG +    G K+SKSLGN +DP+EVI++ G DALRY L    + G+D  Y  
Sbjct: 508 PF-NDVLIHGLVRAEDGRKMSKSLGNGVDPMEVIDQYGADALRYMLSTGSSPGQDLRYST 566

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N   AN I N    +    L + DG+    I   G  + +D+ IL+  +  ++
Sbjct: 567 EKVESVWN--FANKIWN----ASRFALMNMDGLKYEEIDLTGEKSAADKWILTRLNETIE 620

Query: 400 EI 401
            +
Sbjct: 621 TV 622



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 25/175 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           ++EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G     
Sbjct: 36  DKEKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQA 95

Query: 57  KIAKAAQNAGVT------------TKVFVDQNSRNFR----DMADVLDISYDDFIRTTEK 100
           K+ +  ++ G T            T  + ++ +++ R     +   LD S + F  T ++
Sbjct: 96  KVEEKLRSEGTTRYDLGREKFLEETWKWKEEYAKHIRAQWSKLGLGLDYSRERF--TLDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
              D  + ++  + +KG IY+G Y   W      A  + + +++   G +Y+ ++
Sbjct: 154 GLSDAVKEVFVTLYEKGLIYRGEYIINWDPATKTALSDIEVIHQDVQGAFYHMRY 208


>gi|124026858|ref|YP_001015973.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961926|gb|ABM76709.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 933

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 26/297 (8%)

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           L+R+ +   +KI  D + ++  W  +     +T G+ D       +++P +  V G DI+
Sbjct: 463 LAREKYGDSVKIEQD-EDVLDTWFSSGLWPFSTLGWPDETHPDFQRWYPTNTLVTGFDII 521

Query: 269 RFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            F    +   A + +  +P    V+ HG +   +  K+SKS GN IDP+ +IE  G DAL
Sbjct: 522 FFWVARMTMMAGVFTERMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDAL 580

Query: 326 RYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRS-VSMILKDYDGMIP 378
           R+ LVRE+A  G+D    F  K+     V A  + AN + N    + +++  +DY+ +  
Sbjct: 581 RFALVREVAGAGQDIRLDFDRKNQTSATVEASRNFANKLWNATRFALINLEDQDYENLES 640

Query: 379 TPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
              +  + SD  ILS  +RV  E     +N  +  A   +         D Y +  K   
Sbjct: 641 YDSSKLQLSDRWILSRLARVNHETANRYENYALGEAAKGLYEFAWNDFCDWYLELIKRRL 700

Query: 436 LKKTN------PDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
               N       DR  A +VLY   +V+  L I+L   +P L  +++  L   DE++
Sbjct: 701 NNSENLSSDELLDRKIAKSVLY---KVLSDLLIMLHPLMPHLTEELWHGLTGLDEDQ 754


>gi|15805185|ref|NP_293872.1| valyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|12585355|sp|Q9RY06|SYV_DEIRA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|6457813|gb|AAF09735.1|AE001877_2 valyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 913

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 156/385 (40%), Gaps = 71/385 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +  E +F ++  + D++L   +     ++P ER  +V       ++D ++SR+ + 
Sbjct: 366 PVEPIISEQWFVKMKPFADQVLEGLDKGEIKLVP-ERYTKVNRDWLENIRDWNISRQLW- 423

Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243
           WG +IP                       DP+Y          +   W  +     +T G
Sbjct: 424 WGHQIPAWYDKEGNIYVPDPENPELDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 483

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILH-KG 300
           + D       KF+P  + V G DIL F    +    + L+   P    V  HG  L  KG
Sbjct: 484 WPDTDSEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTGQAPF-STVMLHGLYLDAKG 542

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD-------KDGLKKRVNA- 352
           +K+SKS GN IDP+E+  + GVDA R+        G+D  +D       ++   K  NA 
Sbjct: 543 QKMSKSKGNGIDPLELFGQYGVDACRFAFTFLSTGGQDIKHDARRFEQGRNFANKLWNAT 602

Query: 353 ----------------DLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVC 394
                           DL+  +   V+    ++L+  D    +      T +D  I+S  
Sbjct: 603 RFALMRLGEARIEGSDDLSAYVRAAVTLPDGVLLRSKDVLAQLKERDDLTLADRWIISRL 662

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + V  E    +    I  A+  + S   +   D Y +A KP EL   N    +T+  V  
Sbjct: 663 NDVTAEASAQLDAFDIGAAIRTLYSFTWDEFCDWYIEAAKP-ELASGNLGTMATLKVVLE 721

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V++    LL  F+P + ++++  L
Sbjct: 722 HVLK----LLHPFMPFITSELYAAL 742


>gi|72383119|ref|YP_292474.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|90101543|sp|Q46IA7|SYV_PROMT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72002969|gb|AAZ58771.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 933

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 26/297 (8%)

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           L+R+ +   +KI  D + ++  W  +     +T G+ D       +++P +  V G DI+
Sbjct: 463 LAREKYGDSVKIEQD-EDVLDTWFSSGLWPFSTLGWPDETHPDFQRWYPTNTLVTGFDII 521

Query: 269 RFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            F    +   A + +  +P    V+ HG +   +  K+SKS GN IDP+ +IE  G DAL
Sbjct: 522 FFWVARMTMMAGVFTERMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDAL 580

Query: 326 RYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRS-VSMILKDYDGMIP 378
           R+ LVRE+A  G+D    F  K+     V A  + AN + N    + +++  +DY+ +  
Sbjct: 581 RFALVREVAGAGQDIRLDFDRKNQTSATVEASRNFANKLWNATRFALINLEDQDYENLES 640

Query: 379 TPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
              +  + SD  ILS  +RV  E     +N  +  A   +         D Y +  K   
Sbjct: 641 YDSSKLQLSDRWILSRLARVNHETANRYENYALGEAAKGLYEFAWNDFCDWYLELIKRRL 700

Query: 436 LKKTN------PDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
               N       DR  A +VLY   +V+  L I+L   +P L  +++  L   DE++
Sbjct: 701 NNSENLSSDELLDRKIAKSVLY---KVLSDLLIMLHPLMPHLTEELWHGLTGLDEDQ 754


>gi|313894560|ref|ZP_07828124.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440956|gb|EFR59384.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 822

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      W         N+  +    DG  +    N V+  +   +F R++ Y D+LL+
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGACWRCD-NTVEKKDLSQWFLRITEYADRLLT 204



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 28/203 (13%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ AN P  + + + G +L +G K+SKS GNV+ P E+I   G D  R F++      +D
Sbjct: 560 LIEANEPF-RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRD 618

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +   G++         G    + R V  I+  Y  +G     G  T+ +  +     R
Sbjct: 619 LDWSDQGVE---------GSYRFLGR-VWRIVDAYNEEGKKNVTGELTKDEFVLRRELHR 668

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEV 454
           V++++ E++ N    + A++ ++ LV+ +               + D+A T+   +  E+
Sbjct: 669 VIKKVTEDLDNNFNFNTAISAIMELVNAM-------------YAHKDKADTINSALANEL 715

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            R L +LL  FVP +  +++  L
Sbjct: 716 TRSLLLLLAPFVPHITEELWHEL 738


>gi|308189742|ref|YP_003922673.1| valine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624484|gb|ADN68789.1| valine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 832

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 158/359 (44%), Gaps = 57/359 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +L + +S        +R   VI      + D +
Sbjct: 342 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 401

Query: 209 LSRKTFDWGIKIP----DDPQYIMYV-----WI---DALTNYLTTT----GYLDNPDGSK 252
           +SR+ + WG +IP    DD   +        W+   D L  + ++      +L  P  + 
Sbjct: 402 ISRQLW-WGHRIPAWYKDDKVKVQIKSPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 460

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKIS 304
              +++P  L V G DI+ F    W A +    L   K     +V  HG +  + G+K+S
Sbjct: 461 LLKRYYPTSLLVTGYDIIFF----WVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMS 516

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDPI+VI E G DALR+F++   + G D  Y K+ +       L N + N ++R
Sbjct: 517 KSSNNGIDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWN-IAR 573

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421
            + ++ +D +         T +D  I +    + + I + MQN    ++   L++ I   
Sbjct: 574 YIQLLPEDKE------NKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFI--- 624

Query: 422 SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 ++    W  EL K  P++ +      ++ ++ L ++   F+P + + ++ +LF
Sbjct: 625 ------YNDFSSWYVELLKIMPNKKA-----ALDNLKSLLLIAHPFLPFITDHLYKVLF 672



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
          HIGHA +  I D + R+ +L G DV +  G D  G       +N 
Sbjct: 50 HIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKVENT 94


>gi|152978421|ref|YP_001344050.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704228|sp|A6VMB8|SYL_ACTSZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150840144|gb|ABR74115.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 860

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   VL  SYD    + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKNQLKVLGFSYDWEREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSVVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEQLLGGLD 207

Query: 182 SHPEF 186
           + PE+
Sbjct: 208 TLPEW 212


>gi|289432321|ref|YP_003462194.1| valyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946041|gb|ADC73738.1| valyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 880

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 46/281 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F ++       L    S    ILP ER N+V       ++D  +SR+ + WG +
Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFNKVYQNWMENIRDWCISRQLW-WGHR 418

Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           IP                             DP  ++  W  +     +T G+ D  +  
Sbjct: 419 IPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPD-VLDTWFSSGLWPHSTLGWPDQTEDL 477

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISK 305
           K +F+P  +     DI+ F    W A ++   +     +P + V+ HG I   KGEK+SK
Sbjct: 478 K-RFYPGTVMETAYDIIFF----WVARMIVMGMEDMNEVPFRTVYLHGLIRDDKGEKMSK 532

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           + GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + N  SR 
Sbjct: 533 TKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRF 589

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           V M L +   + P        D  I+S  +RV  ++   M+
Sbjct: 590 VIMNLGEAKELTPE-AELPLEDRWIISRMNRVTADVTRLME 629


>gi|51246452|ref|YP_066336.1| leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|60390691|sp|Q6AJZ7|SYL_DESPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50877489|emb|CAG37329.1| probable leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 827

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 34  EDKEKYYLLEMFPYPSGRIHMGHVRNYTIGDVVARYKRMRGFNVLHPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AQ       V+   N    R     L +SY  D  + T   +++   + L+ ++ +KG I
Sbjct: 94  AQKNNTHPSVWTYDNIDYMRQQLQQLGLSYDWDREMATCNPKYYRQEQQLFIEMLEKGLI 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+   +  +    +    +++V +GA  +     H      +  G+FF+++ Y ++LL+
Sbjct: 154 YEKVTTVNWCDTCQTVLANEQVIEGACWRCDQLVHP----RKMNGWFFKITDYAEELLA 208



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 36/257 (14%)

Query: 249 DGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D +KAK+W A D ++ G +    H +Y   F         L  + P   K+ + G ++  
Sbjct: 524 DKAKAKYWLAVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLEIDEPF-IKLLTQGMVIKD 582

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP ++I E G D  R F +      +D  +  +G++         G  
Sbjct: 583 GTKMSKSKGNVVDPHDLISEFGADTTRLFSLFAAPPERDLEWSSEGVE---------GSS 633

Query: 360 NLVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
             ++R    I  +++ +      P   +E D  +     + ++ + EN+++    + A++
Sbjct: 634 RFLNRIYRFITANFEALTAGEAFPKKLSEEDRLLHRKNHQTIKRVTENIEHNFHFNTAIS 693

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ LV+++   F  +K           A  VL  +V+ +    +LL   VP   N+++ 
Sbjct: 694 AVMELVNQLFAQFKNEKSIA--------APAVLRASVDSV---LLLLSPMVPHFCNEMWM 742

Query: 476 ILFVAD--ENRCFQSLD 490
           +L   +  EN+ +   D
Sbjct: 743 VLGNTEPIENQAWPEFD 759


>gi|73748272|ref|YP_307511.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|90103541|sp|Q3ZZG9|SYV_DEHSC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|73659988|emb|CAI82595.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 880

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 46/281 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F ++       L    S    ILP ER N+V       ++D  +SR+ + WG +
Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFNKVYQNWMENIRDWCISRQLW-WGHR 418

Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           IP                             DP  ++  W  +     +T G+ D  +  
Sbjct: 419 IPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPD-VLDTWFSSGLWPHSTLGWPDQTEDL 477

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISK 305
           K +F+P  +     DI+ F    W A ++   +     +P + V+ HG I   KGEK+SK
Sbjct: 478 K-RFYPGTVMETAYDIIFF----WVARMIVMGMEDMNEVPFRTVYLHGLIRDDKGEKMSK 532

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           + GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + N  SR 
Sbjct: 533 TKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRF 589

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           V M L +   + P        D  I+S  +RV  ++   M+
Sbjct: 590 VIMNLGEAKELTPE-AELPLEDRWIISRMNRVTADVTRLME 629


>gi|33862238|ref|NP_893799.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|81575511|sp|Q7UZI3|SYV_PROMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33634456|emb|CAE20141.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 918

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 138/296 (46%), Gaps = 30/296 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS + K F   +++  D   ++  W  +     +T G+ +  D    K++P  + + G D
Sbjct: 452 LSKATKEFGSNLQLIRDKD-VLDTWFSSGLWPFSTLGWPNINDADFKKWYPNSVLITGFD 510

Query: 267 ILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
           I+ F    W A +       + N+P  K V+ HG +     +K+SKS GN IDP+ +I++
Sbjct: 511 IIFF----WVARMTMMGKTFTNNIPF-KDVYIHGLVRDENNKKMSKSSGNGIDPLLLIDK 565

Query: 320 VGVDALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMI 377
            G DALR+ L+RE+A  G+D   D D  +   +  + +    N +  +   +L   +   
Sbjct: 566 YGSDALRFALLREVAGAGQDIRLDYDRKENTSSTVEASRNFANKLWNATKFVL--INKTF 623

Query: 378 PTPGAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRY 427
               +  ESDE  L +  +     L ++   + N LI   L +   L+ E       D Y
Sbjct: 624 SENCSLNESDEKNLELSDKWILSKLNQLNTKVSNLLIEYKLGESAKLLYEFAWNDFCDWY 683

Query: 428 FD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            + A++ +  K+T+  + S    + ++V+  + +++  F+P +  +++  L +  E
Sbjct: 684 VEFAKQKFNNKETHNRKISE--KILIKVLTDVLVMMHPFMPHITEELWHKLQIKPE 737


>gi|289771644|ref|ZP_06531022.1| valyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289701843|gb|EFD69272.1| valyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 780

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 457 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +    G+K+SKS GNV++P++ +++ G DALR+ L R    G D    +
Sbjct: 516 PPFHTIALHGMVRDQNGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  + V+ E+
Sbjct: 576 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEV 630


>gi|256830217|ref|YP_003158945.1| valyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579393|gb|ACU90529.1| valyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 887

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 43/243 (17%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LR       +E Y+    Q Y  + N   ++ E+ +F  +    +K  +  E     I P
Sbjct: 333 LRACGSLTAEEPYENKVNQCYRCKTNIEPFVSEQ-WFVSVKPLAEKARAAVEDGRTTIWP 391

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDP----------- 224
            +      +++ + ++D  +SR+ + WG +IP              +DP           
Sbjct: 392 AQWNKTYFNWLDN-IRDWCISRQLW-WGHRIPVWTCQDCGELIVAREDPTACACGSTRLL 449

Query: 225 --QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
             + ++  W  +     +T G+ +  +  KA F+P  L V G DIL F    W A ++  
Sbjct: 450 QDEDVLDTWFSSALWPFSTMGWPEQTNELKA-FYPTSLLVTGFDILFF----WVARMMMM 504

Query: 283 ------NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                 N+P  K V+ H  +  + G+K+SKS GNVIDP+ +I++ G D+LR+ L    A 
Sbjct: 505 GLQFMDNVPF-KDVYIHALVRDEHGKKMSKSTGNVIDPLAMIDKYGCDSLRFTLTSFAAM 563

Query: 336 GKD 338
           G+D
Sbjct: 564 GRD 566



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 25/165 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKI 58
           S  I  PN     H+GHA  + + D++ R+ R  G  VL+  GTD  G         + +
Sbjct: 45  SIVIPPPNVTGALHMGHALNLTLQDIMCRYMRQRGKTVLWVPGTDHAGIATQNVVERKLL 104

Query: 59  AKAAQNAGVTTKVFV--------DQNSR---NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           A+  +   +  + F+        D   R     R M   +D S + F  T ++      R
Sbjct: 105 AEGTKREDLGREEFISRVWEWKEDYGGRILNQIRRMGASVDWSRERF--TMDEGLSKAVR 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++  + ++G +Y+G Y   +  R      DDEV Y  A    Y+
Sbjct: 163 EVFVSLYEQGLVYRGKYIINWCTRCHTALADDEVEYAPAKSTLYH 207


>gi|163939986|ref|YP_001644870.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862183|gb|ABY43242.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 1033

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYEVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    NP++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|238855288|ref|ZP_04645607.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664646|ref|ZP_05865498.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932419|ref|ZP_06337844.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238832180|gb|EEQ24498.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561711|gb|EEX27683.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303368|gb|EFA95545.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K L   ++  +     ER ++        + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           +     MYV                    W  +     +T G+ D       +++P +  
Sbjct: 419 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 534

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L     
Sbjct: 535 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  +D+ I    +  ++E+
Sbjct: 592 PAHMPDVAKFDLADKWIFDRLNHTVKEV 619



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 29/170 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  I D L R  R+ G D L+  G D  G  IA  A+    
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IATQAKVEAK 96

Query: 68  TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105
             K  +D++        +   D  D                LD S + F  T +K     
Sbjct: 97  LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 154

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            R ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 155 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 204


>gi|104773811|ref|YP_618791.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|103422892|emb|CAI97554.1| Valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 879

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 36/204 (17%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK+L   +         +R    +      + D  +SR+ + WG +IP   
Sbjct: 360 WFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQLW-WGHRIPAWY 418

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               D  Q ++  W  +     +T G+ D       +++P +  
Sbjct: 419 NKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFKRYFPTNAL 478

Query: 262 VIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           V G DI+ F    W + ++  +L      P    V  HG I   +G K+SKSLGN IDP+
Sbjct: 479 VTGYDIIFF----WVSRMIFQSLHFIGERPFDNVVL-HGLIRDEQGRKMSKSLGNGIDPM 533

Query: 315 EVIEEVGVDALRYFLVREIACGKD 338
           +VI++ G DALR+FL+   A G+D
Sbjct: 534 DVIDKYGADALRWFLLNGTAPGQD 557



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 24/137 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D L R+ R+ G D L+  G D  G     K+    +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAKVEARLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      + FV++               ++ +   LD S + F  T +K      R
Sbjct: 99  EQGVSRYDLGREKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERF--TLDKGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY 124
            ++ ++ ++G IY+G Y
Sbjct: 157 RVFVQLYNEGLIYRGEY 173


>gi|147669052|ref|YP_001213870.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270000|gb|ABQ16992.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 880

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 46/281 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F ++       L    S    ILP ER N+V       ++D  +SR+ + WG +
Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFNKVYQNWMENIRDWCISRQLW-WGHR 418

Query: 220 IP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           IP                             DP  ++  W  +     +T G+ D  +  
Sbjct: 419 IPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPD-VLDTWFSSGLWPHSTLGWPDQTEDL 477

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISK 305
           K +F+P  +     DI+ F    W A ++   +     +P + V+ HG I   KGEK+SK
Sbjct: 478 K-RFYPGTVMETAYDIIFF----WVARMIVMGMEDMNEVPFRTVYLHGLIRDDKGEKMSK 532

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           + GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + N  SR 
Sbjct: 533 TKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRF 589

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           V M L +   + P        D  I+S  +RV  ++   M+
Sbjct: 590 VIMNLGEAKELTPE-AELPLEDRWIISRMNRVTADVTRLME 629


>gi|302545422|ref|ZP_07297764.1| valine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463040|gb|EFL26133.1| valine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 877

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  D S AKF+P  + V G DIL F       F L A    
Sbjct: 457 VLDTWFSSGLWPFSTLGWPEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ ++  G DA+R+ L R    G D    +
Sbjct: 516 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDAYGSDAVRFTLARGANPGVDVPIGE 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P P   + +D  ILS  + V+ ++
Sbjct: 576 DWVQASRN--FANKIWN-ATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVADV 630


>gi|254464224|ref|ZP_05077635.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685132|gb|EDZ45614.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 1023

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           ++FD  +++P   DP  ++  W  +    + T G+ +  + +K K++P    V G+DIL 
Sbjct: 568 RSFDGPMQVPMFRDPD-VLDTWFSSGLWPIGTLGWPEWTEETK-KYFPTSTLVTGQDILF 625

Query: 270 F---HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320
           F     +     +L  NLP+ ++     V+ HG +   KG+K+SKS GNV+DP+E+IEE 
Sbjct: 626 FWVARMMMMQLAVLDENLPVKERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIEEF 685

Query: 321 GVDALRYFLVREIACG 336
           G DALR+      A G
Sbjct: 686 GADALRFSSAAMAALG 701



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 53 HMGHAFNNTLQDILIRWKRMQGYDTLWQPGTD-----------HAGIATQMVVER 96


>gi|269961555|ref|ZP_06175917.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833596|gb|EEZ87693.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 857

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATIAAENNPE 276


>gi|170751800|ref|YP_001758060.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658322|gb|ACB27377.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 905

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 23/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD ++  A+++P +  V GKDIL     +W A ++   L
Sbjct: 472 VLDTWFSSALWPFSTLGW---PDSTQELARYYPTNTLVTGKDIL----FFWVARMMMMGL 524

Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L  +       LH       G K+SKS GNV+DP+E+I++VG D LR+ L      G+D
Sbjct: 525 HLTDRAPFETVYLHTLVRDASGAKMSKSKGNVVDPLELIDQVGADVLRFTLCALAVQGRD 584

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D ++   N   A  + N  +R   +     D       A    +   L+  +R +
Sbjct: 585 IKLSTDRVQGYRN--FATKLWN-AARFAELNGCRLDPAFDPRSATGAINRWALTEAARAV 641

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPD-RASTVLYVTVEV 454
            E+   ++    + A A     V  +  D Y +  KP  + +  +P  RA T   V   +
Sbjct: 642 DEVTGALEAFRFNDAAAAAYRFVWNIFCDWYLELAKPVLQGEGVDPAIRAETQASVAF-L 700

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           I Q+A LL  F+P L  +++ I
Sbjct: 701 IDQVAKLLHPFMPFLTEELWAI 722



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  GTD           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILCRFERMRGKDVLWQPGTD-----------HAGIATQMVVER 95


>gi|113461693|ref|YP_719762.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945429|sp|Q0I5C5|SYL_HAES1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112823736|gb|ABI25825.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 860

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   VL   +  D  I T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIEYMKNQLKVLGFGFDWDREITTCKPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LLS  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLSDLD 207

Query: 182 SHPEF 186
             PE+
Sbjct: 208 QLPEW 212


>gi|170718612|ref|YP_001783813.1| leucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189030281|sp|B0URM9|SYL_HAES2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168826741|gb|ACA32112.1| leucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 860

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   VL   +  D  I T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIEYMKNQLKVLGFGFDWDREITTCKPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LLS  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGGCWRC----DTPVEQKEIPQWFIKITDYAEQLLSDLD 207

Query: 182 SHPEF 186
             PE+
Sbjct: 208 QLPEW 212


>gi|313471900|ref|ZP_07812392.1| valine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|313449025|gb|EEQ68181.2| valine--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 883

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K L   ++  +     ER ++        + D  +SR+ + WG +IP   
Sbjct: 364 WFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQLW-WGHRIPAWY 422

Query: 222 DDPQYIMYV--------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           +     MYV                    W  +     +T G+ D       +++P +  
Sbjct: 423 NKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFKRYFPTNAL 482

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++  +L   K+     V  HG I   +G K+SKSLGN IDP++
Sbjct: 483 VTGYDIIFF----WVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMD 538

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--Y 373
           VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L     
Sbjct: 539 VIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLPSDAK 595

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEI 401
              +P    F  +D+ I    +  ++E+
Sbjct: 596 PAHMPDVAKFDLADKWIFDRLNHTVKEV 623



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 29/170 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  I D L R  R+ G D L+  G D  G  IA  A+    
Sbjct: 43  SIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAG--IATQAKVEAK 100

Query: 68  TTKVFVDQNS-------RNFRDMAD---------------VLDISYDDFIRTTEKRHHDT 105
             K  +D++        +   D  D                LD S + F  T +K     
Sbjct: 101 LRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERF--TLDKGLSKA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            R ++ ++ ++G IY+G Y   +  + E   +D EV +K   G +Y+ ++
Sbjct: 159 VRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHKDDKGAFYHIKY 208


>gi|169604544|ref|XP_001795693.1| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15]
 gi|160706593|gb|EAT87677.2| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15]
          Length = 559

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 157/394 (39%), Gaps = 58/394 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G      A   
Sbjct: 17  VLITSALPYVNNVPHLGNIIGSVLSADVFARFARARGYNTLYVCGTDEYGTATETKAIEE 76

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT +   D+      ++ +  +IS+D F RT  +   D  + ++KK+   G + +   +
Sbjct: 77  KVTPQQLCDKYFALHSEVYEWFNISFDHFGRTPTQHQTDIAQDIFKKLYKNGYLEEQTTT 136

Query: 126 GWYSLRDEAYYNDDEV--------YKGADG-QYYNAQH--------NPVQWM-------- 160
             Y    +++  D  V        Y+ A G Q     H        NP   +        
Sbjct: 137 QPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDGATPVPR 196

Query: 161 EEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           E +  +  L   Q K   ++ ++  E            S++K GL+   ++R    WG  
Sbjct: 197 ETKHVYLCLDKLQPKEEEWFKKASQEGNWSSNGIQITASWLKEGLRPRGITRD-LKWGTA 255

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +P +                    +  NP+  K          +GKD + FH + +P   
Sbjct: 256 VPLEK-------------------WWHNPEQVKL------YQFMGKDNVPFHTVVFPCSQ 290

Query: 280 LSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALRYFLVREIAC 335
           +       +   + +  ++ ++  K SKS  N+       ++ G+  D  RY+L+     
Sbjct: 291 IGTGDKWTMLNTISTTEYLNYEKGKFSKSR-NIGVFGNNAKDTGIPSDVWRYYLLSHRPE 349

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
             D  ++ DG     N +L   +GN V+R +  +
Sbjct: 350 TGDTEFEWDGFIAANNNELLKNLGNFVNRVIKFV 383


>gi|15640019|ref|NP_219472.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026258|ref|YP_001934030.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094417|sp|O83998|SYV_TREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3323365|gb|AAC26589.1| valyl-tRNA synthetase (valS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018833|gb|ACD71451.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 956

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 107/250 (42%), Gaps = 41/250 (16%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           I  DP  ++  W  +     +T G+       +A F+P    +   DI+ F    W A +
Sbjct: 484 ITQDPD-VLDTWFSSWLWPFSTLGWPQETQKLRA-FYPTSAVITAYDIIFF----WVARM 537

Query: 280 LSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           + A L        + V+ HG +  K G K+SKSL N +DP+ +I   G DALR+ L    
Sbjct: 538 IMAGLEFTQTVPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMC 597

Query: 334 ACGKDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFTE 385
           A G+D   + D  K  + +  AN +        GNL  R V  I            + TE
Sbjct: 598 AQGQDVLIEMDSFK--MGSRFANKVWNASRYILGNLEGRRVYAIAHV---------SLTE 646

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA-----QKPWELKK 438
            D  I    +  +Q++R  ++    + A   V      S  D Y +A     QKP E +K
Sbjct: 647 LDRWIFHTFNETVQQVRTALEAYRFNDAAQAVYEFFWNSFCDWYVEASKCSFQKPDEQEK 706

Query: 439 TNPDRASTVL 448
              DRA++VL
Sbjct: 707 ---DRAASVL 713



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 25/176 (14%)

Query: 12  AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65
           AI  PN     H+GH    ++ D++ R+ R+ G   L+  GTD  G      + +A +  
Sbjct: 65  AIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVERALRKE 124

Query: 66  G-----VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           G     VT + FV +  +             R M    D + + F  T +     + R  
Sbjct: 125 GIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERF--TLDAGMSASVREA 182

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQWMEEEG 164
           +  + ++G +Y+  Y   +  R     +DDEV+ +  DG  Y  ++  +   EEEG
Sbjct: 183 FVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEEG 238


>gi|291060395|gb|ADD73130.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 984

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 107/250 (42%), Gaps = 41/250 (16%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           I  DP  ++  W  +     +T G+       +A F+P    +   DI+ F    W A +
Sbjct: 512 ITQDPD-VLDTWFSSWLWPFSTLGWPQETQKLRA-FYPTSAVITAYDIIFF----WVARM 565

Query: 280 LSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           + A L        + V+ HG +  K G K+SKSL N +DP+ +I   G DALR+ L    
Sbjct: 566 IMAGLEFTQTVPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMC 625

Query: 334 ACGKDGFYDKDGLKKRVNADLANGI--------GNLVSRSVSMILKDYDGMIPTPGAFTE 385
           A G+D   + D  K  + +  AN +        GNL  R V  I            + TE
Sbjct: 626 AQGQDVLIEMDSFK--MGSRFANKVWNASRYILGNLEGRRVYAIAHV---------SLTE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA-----QKPWELKK 438
            D  I    +  +Q++R  ++    + A   V      S  D Y +A     QKP E +K
Sbjct: 675 LDRWIFHTFNETVQQVRTALEAYRFNDAAQAVYEFFWNSFCDWYVEASKCSFQKPDEQEK 734

Query: 439 TNPDRASTVL 448
              DRA++VL
Sbjct: 735 ---DRAASVL 741



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 25/176 (14%)

Query: 12  AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNA 65
           AI  PN     H+GH    ++ D++ R+ R+ G   L+  GTD  G      + +A +  
Sbjct: 93  AIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVERALRKE 152

Query: 66  G-----VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           G     VT + FV +  +             R M    D + + F  T +     + R  
Sbjct: 153 GIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERF--TLDAGMSASVREA 210

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQWMEEEG 164
           +  + ++G +Y+  Y   +  R     +DDEV+ +  DG  Y  ++  +   EEEG
Sbjct: 211 FVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEEG 266


>gi|71083063|ref|YP_265782.1| leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062176|gb|AAZ21179.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 844

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 8/179 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y      YP+ + H+GH     I DVLAR+  L G +VL   G D  G     A
Sbjct: 29  KTKKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKTLQGYNVLHPMGWDSFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +  K + + N +  R     L +S  +D  I T  + ++   +  +  + DKG +
Sbjct: 89  ARQNNLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDYYKHQQEFFLDLYDKGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K  Y  W  + DE    +++V    DG+ + +    V+  +   +FF +S + + LL
Sbjct: 149 YRKENYVNWDPV-DETVLANEQV---VDGKGWRSGAT-VERKKLNQWFFNISKFSEDLL 202


>gi|229133026|ref|ZP_04261867.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228650444|gb|EEL06438.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 1033

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYEVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    NP++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR   + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARHKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|21221073|ref|NP_626852.1| valyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|12643416|sp|O06851|SYV_STRCO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|6983757|emb|CAB75396.1| valyl tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 874

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +    G+K+SKS GNV++P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFHTIALHGMVRDQNGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  + V+ E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEV 627


>gi|227821920|ref|YP_002825890.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340919|gb|ACP25137.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 947

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+  + P+    K++  D+ V G DI+ F    W A ++   L 
Sbjct: 509 VLDTWFSSALWPFSTLGWPTETPE--LEKYYQTDVLVTGFDIIFF----WVARMMMMGLH 562

Query: 286 LPK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    
Sbjct: 563 FMKDADGTPVEPFHTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMA 622

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           A G+D   D   +    N      + N    +        DG IP   + T  +  IL+ 
Sbjct: 623 AQGRDVKLDPARIAGYRN--FGTKLWNATRFAEMNGATSSDGFIPEAASLT-VNRWILTE 679

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP---WELKKTNPDRASTVL 448
            SR ++++ E ++    + A   +   +     D Y +  KP    E +    +  + V 
Sbjct: 680 LSRTIRDVTEAVEGYRFNDAAGSLYRFIWNQFCDWYLELLKPVFGGEDEAAKRESQACVA 739

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFD 475
           YV  E  +    LL  F+P +  +++D
Sbjct: 740 YVLDETYK----LLHPFMPFMTEELWD 762



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + DV+ RF R+ G DVL+  G D           +AG+ T++ V++ 
Sbjct: 52 HMGHALNNTLQDVMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQ 96


>gi|319408777|emb|CBI82434.1| Valyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 907

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 46/377 (12%)

Query: 130 LRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--YYESH-- 183
           L D+ Y N  E+ K A    +    Q  P  W  E+ YF  +   Q   +S   +  H  
Sbjct: 382 LTDQWYVNAAELAKPAVEAVRQGKTQFVPASW--EKTYFNWMENIQPWCISRQLWWGHQI 439

Query: 184 -----PEFILPIERRNE--VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
                P+ ++ +E+  E  ++S +    K++ L+R             Q ++  W  +  
Sbjct: 440 PAWYGPDGVIFVEKSEEEALVSALSHYGKEVQLTRD------------QDVLDTWFSSAL 487

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------ANLPLPKKV 290
              +T G+ +     K  F+P  L V G DI+ F    W A ++         +P P  V
Sbjct: 488 WPFSTLGWPEKTTELKT-FYPTSLSVTGFDIIFF----WVARMMMMGIHFIGEVPFPT-V 541

Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + H  +  H G K+SKS GNVIDP+E+I++   DALR+ L    A G+D   D   +   
Sbjct: 542 YVHALVRDHTGAKMSKSKGNVIDPLELIDQYSADALRFTLAIMAAQGRDVKLDPSRVAGY 601

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N   A  + N    +    ++      P     T  +  I++  S+ +  +   +++  
Sbjct: 602 RN--FATKLWNATRFAEMNGVRHGLPFKPEEAKLT-FNRWIVTELSKTVSAVTAGIESYK 658

Query: 410 IHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A + +   V  +  D Y +  KP   + ++ D        T  V+ ++  LL  F+P
Sbjct: 659 FNEAASALYRFVWNTLCDWYLEFLKP-VFQGSDEDSKKEAQACTAWVLDEVYKLLHPFMP 717

Query: 468 KLANKIFDILFVADENR 484
            +  K++ +  ++   R
Sbjct: 718 HMTEKLWSLTTMSGTKR 734


>gi|254456291|ref|ZP_05069720.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083293|gb|EDZ60719.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 875

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 22/276 (7%)

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           L+ K +   +++  DP  ++  W  +      T G+ DN D  + KF+P  + V G DI+
Sbjct: 432 LANKHYGKDVELIRDPD-VLDTWFSSGLWPFATLGWPDNKDYVE-KFYPTSVLVTGFDII 489

Query: 269 RFHAIYWPAFLLS-----ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
            F    W A ++       N    K ++ H  +   KG+K+SKS GNVIDP+++IE+   
Sbjct: 490 FF----WVARMIMFGTEFLNKEPFKDIYVHALVRDEKGQKMSKSKGNVIDPLDLIEKYSA 545

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DALR+ L+   + G D    +D +K   N    L N    L++        D+  +    
Sbjct: 546 DALRFTLLSMASPGTDVKLSEDRVKGYRNFLNKLWNANNFLITNEC-----DFTNIDKIS 600

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK 438
                 ++ I +       +I +N+++     A          S  D Y +  K   L  
Sbjct: 601 NLSININKWIYAELIDAKSKIEKNLEDYRFDEAAKNAYQFAWHSYCDWYLELSKT-ILFS 659

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            N +  S V  V+  + +Q+ ILL  F+P +  +I+
Sbjct: 660 DNEEAKSEVKKVSSYIFKQILILLHPFIPFVTEEIW 695



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    I D+L R+HR++  + L+  GTD  G       +    
Sbjct: 35 SIVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTDHAGIATQALVERKLT 94

Query: 68 TTKV 71
          T K+
Sbjct: 95 TEKI 98


>gi|317968252|ref|ZP_07969642.1| valyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 915

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 22/280 (7%)

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHA 272
           F  G  +  DP   +  W  +     +T G+  NP+ +  + W P  + V G DI+ F  
Sbjct: 450 FGAGAVLEQDPD-ALDTWFSSGLWPFSTMGW-PNPEAADLQRWYPTSVLVTGFDIIFFWV 507

Query: 273 --IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             +   A   +  +P  + V+ HG +      K+SKS GN IDP+ +IE  G DALR+ L
Sbjct: 508 ARMTMMAGAFTGQMPF-QDVYIHGLVRDENNRKMSKSAGNGIDPLLLIERYGADALRFAL 566

Query: 330 VREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PG 381
           VRE+A  G+D   D D         + +    N +  +    L +  G  P+      P 
Sbjct: 567 VREVAGAGQDIRLDYDRKSDTSATVEASRNFANKLWNATRFALMNLGGETPSSLGEPDPA 626

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKT 439
           A   +D  ILS  +RV ++  E   +  +  A   +     +EV D Y +  K       
Sbjct: 627 ALQLADRWILSRLARVNRDSAERYGSYGLGEAAKGLYEFAWNEVCDWYVELIKRRLNPGE 686

Query: 440 NPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           NP   +     T   V  + + +L ++L   +P L+ +++
Sbjct: 687 NPSAEALADQRTARQVLAKALNELLVMLHPLMPHLSEELW 726



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 40 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 84


>gi|310816641|ref|YP_003964605.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755376|gb|ADO43305.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 1028

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 19/131 (14%)

Query: 223 DPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAI 273
           DP  ++Y VW DA       ++ L   G L  P+ +   AK++P ++ V G DI+ F   
Sbjct: 581 DPTVLVYPVWRDADVLDTWFSSGLWPIGTLGWPEQTPELAKYFPTNVLVTGFDIIFF--- 637

Query: 274 YWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            W A ++   L +      K V+ H  +   KG+K+SKSLGNV+DP+ +I+E G DA+R+
Sbjct: 638 -WVARMMMMQLAVVDDVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLVLIDEYGADAVRF 696

Query: 328 FLVREIACGKD 338
            L    A G+D
Sbjct: 697 TLTAMAAMGRD 707



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQD-----------HAGI 87

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 88 ATQMVVER 95


>gi|124024602|ref|YP_001018909.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964888|gb|ABM79644.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9303]
          Length = 947

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 28/287 (9%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           +R  F   + I  D + ++  W  +     +T G+ D        ++P    V G DI+ 
Sbjct: 482 ARDQFGEAVVIQQD-EDVLDTWFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIF 540

Query: 270 FHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           F    +   A   +  +P    V+ HG +   +  K+SKS GN IDP+ +IE  G DALR
Sbjct: 541 FWVARMTMMAGAFTGRMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALR 599

Query: 327 YFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT----- 379
           + LVRE+A  G+D   D D         + A    N +  +    L +  G  P      
Sbjct: 600 FALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNATRFALMNLGGETPASLGEP 659

Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
            P +   +D  ILS  +R+ +++ E   +  +  A   +         D Y +  K    
Sbjct: 660 DPASLQLADRWILSRLARMTRDVAERYDSYRLGEAAKCLYEFAWNDICDWYLELSK---- 715

Query: 437 KKTNPDR---------ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++ +P             T   V  +V+  L ++L   +P L+ +++
Sbjct: 716 RRLHPGEDPSDEVLADQCTARQVLAKVLADLLVMLHPLMPHLSEELW 762



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
           S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 71  SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 115


>gi|270307798|ref|YP_003329856.1| valyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153690|gb|ACZ61528.1| valyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 880

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 44/281 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F ++       L    S    ILP ER  +V       ++D  +SR+ + WG +
Sbjct: 361 MVSKQWFVKMEPLAKPALEAVNSGRIQILP-ERFTKVYQNWMENIRDWCISRQLW-WGHR 418

Query: 220 IP-------------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           IP             +DP                ++  W  +     +T G+ D  +  K
Sbjct: 419 IPVWYCPCGEMIVSKEDPTACPKCGCTQLEQDPDVLDTWFSSGLWPHSTLGWPDQTEDLK 478

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISKS 306
            +F+P  +     DI+ F    W A ++   +     +P + V+ HG I   KGEK+SK+
Sbjct: 479 -RFYPGSVLETAYDIIFF----WVARMIVMGIEDMKEVPFRTVYLHGLIRDDKGEKMSKT 533

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + N  SR V
Sbjct: 534 KGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLWN-ASRFV 590

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            M L +   ++P        D  ILS  +RV  ++   M+ 
Sbjct: 591 IMNLGEGKELLPE-AELPLEDRWILSRMNRVTADVTRLMEE 630


>gi|156973531|ref|YP_001444438.1| leucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166231652|sp|A7MY86|SYL_VIBHB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156525125|gb|ABU70211.1| hypothetical protein VIBHAR_01222 [Vibrio harveyi ATCC BAA-1116]
          Length = 862

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 18/257 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVISFVKSGLKDLSL-SRKTFDWGIKIPDDPQYIMYVWI 232
              E  PE +  ++R    R+E +  ++  LKD  +  ++  +     PD    + YV I
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVE-LRFALKDSEVKGQQDLEVYTTRPDTLMGVTYVGI 265

Query: 233 DALTNYLTTTGYLDNPD 249
            A  + L T    +NP+
Sbjct: 266 -AAGHPLATIAAENNPE 281


>gi|260900739|ref|ZP_05909134.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108996|gb|EFO46536.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 728

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATLAAENNPE 276


>gi|257125348|ref|YP_003163462.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049287|gb|ACV38471.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 881

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 20/294 (6%)

Query: 199 FVKSGLKDLSL-SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           FV   L++  + +R+ F   + + ++   ++  W  +     +T G+ +  +  K KF+P
Sbjct: 425 FVAKSLEEAKIQAREKFGKDVNLTEETD-VLDTWFSSALWPFSTLGWPNETEDLK-KFFP 482

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVI 311
            +  V G DIL F    W A ++  +L +  +     V+ HG I   KG K+SKSLGN  
Sbjct: 483 TNALVTGADILFF----WVARMVMMSLYIKDEIPFNYVYLHGIIRDEKGRKMSKSLGNSP 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+++I + G DA+R+  +   + G+D  + +  L+  + +  AN + N  SR V   L+
Sbjct: 539 DPLDLIAKYGADAIRFSFLYNTSQGQDIHFSEKLLE--MGSAFANKVWN-ASRFVLSNLE 595

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+D             D+ ILS      + I ENM+   +  A             D Y 
Sbjct: 596 DFDVSTTVDKSELKLEDKWILSKLQTASKLINENMEKYELDAAAKLTYEFFRGDFCDWYV 655

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +  K     +   D+     +V   V+ +   +L  F+P +  +I+  L   +E
Sbjct: 656 EIAKTRVYGQEGSDKV-VAQWVLRHVLDKGLKMLHPFMPFITEEIWQKLQTGEE 708



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 26/182 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   S AI  PN     H+GH     I D + R+ R+ G D L+  G D  G     K+
Sbjct: 35  EKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRYKRMSGFDTLWIPGMDHAGIATQNKV 94

Query: 59  AKAAQNAGVTTKV-----FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102
            +   + G + +      F+ +            ++  R +   LD + + F  T ++  
Sbjct: 95  ERMLADEGTSKEEIGYDEFLRRTWEWKEKHGGLITKQLRKLGVSLDWTRERF--TMDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWME 161
            +  + ++ K+ + G IY+G Y   +   D+    DDEV ++  +G+ +  ++ P++  +
Sbjct: 153 SEAVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHEDKNGKIWEIRY-PIKDSD 211

Query: 162 EE 163
           EE
Sbjct: 212 EE 213


>gi|229011487|ref|ZP_04168675.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228749778|gb|EEL99615.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 1033

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPEEKYEVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    NP++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|328953428|ref|YP_004370762.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453752|gb|AEB09581.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 832

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 9/197 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y+     YP+ + H+GH     I DV+AR+  + G ++L   G D  G     
Sbjct: 29  LSDKSKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYKHMQGFNILHPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   GV    +  +N    R     L  SYD    + T +  ++   + ++ ++  +G 
Sbjct: 89  AALAHGVHPAAWTYENIDYMRRQLKSLGYSYDWSRELATCDPDYYRWEQSVFIEMFRRGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    +++V  GA  +     H PV   E E +FF+++ Y ++LL 
Sbjct: 149 AYKKLSPVNWCDHCQTVLANEQVEDGACWRC----HQPVALRELEQWFFKITDYVEELLE 204

Query: 179 YYE---SHPEFILPIER 192
           Y +     PE +L ++R
Sbjct: 205 YCDRLPGWPERVLTMQR 221



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 35/248 (14%)

Query: 243 GYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSH 293
           G LD P   +  +W A D ++ G +    H +Y   F         +  + P   ++ + 
Sbjct: 518 GILDRP---RVNYWMAVDQYIGGIEHAVLHLLYARFFTKVLRDLGYIQVDEPF-TRLLTQ 573

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +L  G K+SKS GNV+DP E+I   G D  R F +      KD  +   G+       
Sbjct: 574 GMVLMDGAKMSKSKGNVVDPNELIGTYGADTTRLFCLFAAPPEKDLEWSDQGVAGAFR-- 631

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             N I +LV      +L+      P  G   E         S  L+ +R+ + +Q IHRA
Sbjct: 632 FLNRIWSLVKE----LLESLKSAPPWRGTGAE--------LSPELRRLRQKV-HQTIHRA 678

Query: 414 LAQV-------ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            + +        ++ + ++   D  K  E   T+P        V  E I  L ++L    
Sbjct: 679 TSDIEARFHFNTAIAALMELVNDLYKAREEPATDPSSNHLAASVWREAIEVLILILSPMA 738

Query: 467 PKLANKIF 474
           P LA +++
Sbjct: 739 PHLAEELW 746


>gi|319778238|ref|YP_004129151.1| Isoleucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108262|gb|ADU91008.1| Isoleucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 941

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 19/205 (9%)

Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + ++T  G  D   +GS      WPADL++ G D  R  FH+    + ++    
Sbjct: 533 VWFDSGSTHITVNGGRDQEFNGSHKNDLTWPADLYLEGSDQHRGWFHSSLLTSSMIYGRA 592

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + +R +       G+    D+
Sbjct: 593 PY-KSLLTHGFVVDGQGRKMSKSVGNVIAPKQVADTLGAEIIRLWTAATDYSGELSISDQ 651

Query: 344 DGLK-----KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
              +     +R+   +   +GNL     S  L D D M+       E D   +++ S++ 
Sbjct: 652 ILKRVVESYRRIRNTICFLLGNLHDFDASKDLIDTDNML-------EVDRYAVAIASQLS 704

Query: 399 QEIRENMQNQLIHRALAQVISLVSE 423
           ++I    +    H A+++  +  SE
Sbjct: 705 EQITSLYEKFEFHPAVSRFQTYCSE 729



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          R K  ++    Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 32 RPKFILNDGPPYANGDIHIGHAVNKILKDIIIKSKSMAGFDAPYIPGWDCHGMPI 86


>gi|315658074|ref|ZP_07910946.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496403|gb|EFU84726.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 876

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           ++D ++SR+ + WG +IP                       +  + ++  W  +     +
Sbjct: 398 IRDWTISRQLW-WGHQIPAWYHKETGEIYVAEQAPKDIENWEQDEDVLDTWFSSALWPFS 456

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295
           T G+ +       +++P +  + G DI+ F    W A ++   L   ++     V  HG 
Sbjct: 457 TLGWPNESADDFKRYYPTNALITGYDIIFF----WVARMIFQGLEFTERRPFQDVLLHGL 512

Query: 296 I-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +    G K+SKSLGN +DP++VIEE G D+LRYFL    + G D  Y  + ++   N   
Sbjct: 513 VRAEDGRKMSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--F 570

Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401
            N I N    S+  I +D+    I   G  + +D+ IL+  +  ++ +
Sbjct: 571 INKIWNGARFSLMNIGEDFAVEDIDLSGNLSLADKWILTRLNETIETV 618



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G
Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 85


>gi|289550579|ref|YP_003471483.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180111|gb|ADC87356.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 876

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           ++D ++SR+ + WG +IP                       +  + ++  W  +     +
Sbjct: 398 IRDWTISRQLW-WGHQIPAWYHKETGEIYVAEQAPKDIENWEQDEDVLDTWFSSALWPFS 456

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295
           T G+ +       +++P +  + G DI+ F    W A ++   L   ++     V  HG 
Sbjct: 457 TLGWPNESADDFKRYYPTNALITGYDIIFF----WVARMIFQGLEFTERRPFQDVLLHGL 512

Query: 296 I-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +    G K+SKSLGN +DP++VIEE G D+LRYFL    + G D  Y  + ++   N   
Sbjct: 513 VRAEDGRKMSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--F 570

Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401
            N I N    S+  I +D+    I   G  + +D+ IL+  +  ++ +
Sbjct: 571 INKIWNGARFSLMNIGEDFAVEDIDLSGNLSLADKWILTRLNETIETV 618



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G
Sbjct: 38 TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 85


>gi|189030336|sp|Q2GDQ6|SYL_NEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 831

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + HIGH    +I DVLAR+ R  G +VL   G D  G    KAA
Sbjct: 25  QRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            N+ +  +++ ++N    R     + +SYD
Sbjct: 85  INSNIHPRIWTEKNIAKMRTSLKSIGLSYD 114


>gi|242242928|ref|ZP_04797373.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233643|gb|EES35955.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 886

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 453 VLDTWFSSALWPFSTLGWPDTNADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 508

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 509 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 568

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I + +    I   G  + +D+ IL+  +  + 
Sbjct: 569 YSTEKVESVWN--FINKIWNAARFSLMNIGEGFKVEDIDLSGNLSLADQWILTRLNETIS 626

Query: 400 ---EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              E+ +  +   + RAL   I      D Y +  K   +   +  +  T   V   V+ 
Sbjct: 627 TVTELSDKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDESQKQTTRSVLSYVLD 684

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  +L  F+P +   I+  L
Sbjct: 685 KIMKMLHPFMPFVTETIWQSL 705



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G
Sbjct: 40 EDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG 95


>gi|88608827|ref|YP_506390.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600996|gb|ABD46464.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 851

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + HIGH    +I DVLAR+ R  G +VL   G D  G    KAA
Sbjct: 45  QRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            N+ +  +++ ++N    R     + +SYD
Sbjct: 105 INSNIHPRIWTEKNIAKMRTSLKSIGLSYD 134


>gi|260363864|ref|ZP_05776616.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308114636|gb|EFO52176.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 660

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATLAAENNPE 276


>gi|206896117|ref|YP_002247032.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738734|gb|ACI17812.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 906

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 15/143 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++      L+  DG +   WPADL++ G D  R  F      A  L    
Sbjct: 524 ILDVWFDSGVSHYAV---LEQYDGMR---WPADLYLEGYDQHRGWFQTSLLTAVPLKGQA 577

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGKD 338
           P  K V SHGF+L   G  +SKSLGNVIDP +V+  VG D LR  L+      +I  G++
Sbjct: 578 PY-KTVLSHGFVLDESGRAMSKSLGNVIDPSDVVANVGADVLRLALLMSDYTADIQVGQN 636

Query: 339 GFYDKDGLKKRVNADLANGIGNL 361
            F     + K++        GNL
Sbjct: 637 IFNQASEIYKKIRNTFRFMEGNL 659


>gi|260898991|ref|ZP_05907432.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308087477|gb|EFO37172.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 820

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATLAAENNPE 276


>gi|28897501|ref|NP_797106.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839855|ref|ZP_01992522.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|31077000|sp|Q87RQ0|SYL_VIBPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28805713|dbj|BAC58990.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746627|gb|EDM57615.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 857

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATLAAENNPE 276


>gi|73968521|ref|XP_858962.1| PREDICTED: similar to methionine-tRNA synthetase isoform 4 [Canis
           familiaris]
          Length = 546

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 32/265 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G      A   G+
Sbjct: 268 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATETKAMEEGL 327

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +      
Sbjct: 328 TPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFVLQDTVEQL 387

Query: 128 YSLRDEAYYNDDEV--------YKGADG------------------QYYNAQHNPVQWME 161
              R   +  D  V        Y+ A G                  Q    +  PV    
Sbjct: 388 RCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCRSCPVV-KS 446

Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            +  F  L   + +L  +  ++ P        R  + S+++ GLK   ++R    WG  +
Sbjct: 447 SQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD-LKWGTPV 505

Query: 221 PDD--PQYIMYVWIDALTNYLTTTG 243
           P +     + YVW DA   YL+ T 
Sbjct: 506 PLEGFEDKVFYVWFDATIGYLSITA 530


>gi|329897211|ref|ZP_08271951.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921366|gb|EGG28760.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 810

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y      YP+ + H+GH     IADV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  KREKFYCLAMFPYPSGKLHMGHVRNYTIADVIARFQRMLGKNVLQPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    RD    L  +YD    + T E  ++   +  + ++ +KG  Y
Sbjct: 89  IKNNVPPAAWTADNINYMRDQLKRLGFAYDWTREVTTCEPDYYRWEQWFFTRLFEKGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K      +   D     +++V    DG  +    NPV+    + +F +++ Y ++LL+  
Sbjct: 149 KKQAEVNWCETDNTVLANEQV---VDGCCWRCD-NPVERRNIDQWFIKITDYAEQLLNDI 204

Query: 179 -YYESHPEFILPIER 192
              +  PE +  ++R
Sbjct: 205 DQLDGWPEQVKTMQR 219



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 19/183 (10%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
           A +W P D +V G +    H +Y   F        L++++ P  K++ + G +L  G K+
Sbjct: 516 ANYWLPVDQYVGGIEHAILHLLYARFFHKLLRDEGLVNSDEPF-KRLLTQGMVLKDGAKM 574

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP  +I+  G D +R F +      +   +   G+         +G    + 
Sbjct: 575 SKSKGNTVDPQALIDSYGADTVRLFSMFAAPPEQSLEWSDAGV---------DGAHRFLK 625

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   M  +  DG   TP     + +    +   + +   +  + Q  + A+A V+ L +E
Sbjct: 626 RLWRMAFEHIDGTADTPEKPLTAKDVRRKLHETIAKVTDDYGRRQTFNTAIAAVMELCNE 685

Query: 424 VDR 426
           + R
Sbjct: 686 LVR 688


>gi|78484824|ref|YP_390749.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123555907|sp|Q31IE8|SYL_THICR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78363110|gb|ABB41075.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 877

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 21/244 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA 
Sbjct: 40  KEKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRFQRMQGKNVLQPMGWDAFGLPAENAAM 99

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIY 120
           +  V    +  QN    R+    L + Y D+ R     H +  R    L+ ++ +KG +Y
Sbjct: 100 DNQVAPAKWTYQNIDYMRNQLKRLGLGY-DWTREVATCHPEYYRWEQWLFTRLMEKGLVY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           +      +   D+    +++V    DG+ + +   PV+  E   +F R++ Y ++LL+  
Sbjct: 159 RKLSVVNWDPVDQTVLANEQVI---DGKGWRS-GVPVERKEIAQWFLRITDYAEELLTDL 214

Query: 179 -YYESHPEFILPIERR-------NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
              E  PE +  +++         E+   + SGL + + S K +      PD    + YV
Sbjct: 215 DQLEGWPEQVKTMQKNWIGKSTGLEIEFPIASGLDESNGSLKVY---TTRPDTLMGVTYV 271

Query: 231 WIDA 234
            + A
Sbjct: 272 AVAA 275


>gi|311069521|ref|YP_003974444.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870038|gb|ADP33513.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 804

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    +F  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAIFTKQNIDNFRRQIQALGFSYDWDREINTTDPGYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYADRLLD 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEELDWPESIKDMQR 219



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 10/84 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-HKGEKIS 304
           K+ P D+++ G +    H +Y   W  FL    + +P K     +++ G IL    EK+S
Sbjct: 520 KWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGV-VPTKEPFQQLYNQGMILGENNEKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNV++P E++   G D LR +
Sbjct: 579 KSKGNVVNPDEIVSSHGADTLRLY 602


>gi|258404389|ref|YP_003197131.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796616|gb|ACV67553.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 886

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 68/321 (21%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP              + ++  W  + 
Sbjct: 403 IRDWCISRQIW-WGHRIPAWTCQECGKLIVSREDPTVCPDCGHTSLHQDEDVLDTWFSSA 461

Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
               +T G+   PD ++  A F+P  + V G DIL F    W A ++   L    +V  H
Sbjct: 462 LWPFSTLGW---PDETQELATFYPTSVLVTGFDILFF----WVARMMMMGLHFKDEVPFH 514

Query: 294 GFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +H       G K+SKS GNVIDP++++ + G DALR+ L    A G+D        +
Sbjct: 515 DVYIHALVRDEDGRKMSKSTGNVIDPLDMVAKYGTDALRFTLTAFAAMGRDIKLS----E 570

Query: 348 KRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQ 399
           KR+       N I N    ++  +  D     P P             E +       L+
Sbjct: 571 KRIEGYRHFMNKIWNAARFALMHLPGDMGEPEPDPSDSLVHRWILHRLEEVKQAVGAALE 630

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL---KKTNPDRASTVLYVTVEVIR 456
           E R N   Q +++ +   +      D Y +  KP EL    +   +RA +VL+    V+R
Sbjct: 631 EYRFNDAAQELYQFVWHEV-----CDWYLEMVKP-ELYGEDEAAKNRARSVLHT---VLR 681

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++ +LL   +P +  +I++ L
Sbjct: 682 EVLVLLHPTIPFITAEIWNSL 702



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     H+GHA  + + D+L R++R  G  VL+  GTD  G      + KA  
Sbjct: 43  SIVIPPPNVTGTLHMGHALNLTLQDILCRYNRQKGKKVLWVPGTDHAGIATQNVVEKALA 102

Query: 64  NAGVTTK 70
             G T +
Sbjct: 103 QEGTTRQ 109


>gi|187477909|ref|YP_785933.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123725187|sp|Q2L2K5|SYI_BORA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115422495|emb|CAJ49020.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 953

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 15/203 (7%)

Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D+   GS  +   WPADL++ G D  R  FH+      +L    
Sbjct: 546 VWFDSGSTHATVLGGKDHALHGSHGEQLAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQE 400
             + KRV  +    I N + R +   + D+DG+   +P  G   E D   L + +++  E
Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANVADFDGVNQAVPY-GDLLEIDRYALVMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
           ++ + Q+   H A++++ +  SE
Sbjct: 720 VQAHYQSYDFHPAVSRLQTFCSE 742



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R    +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 45  KGRPLFILHDGPPYANGDIHIGHAVNKILKDIIVKSRSMAGYDAPYVPGWDCHGMPIEIQ 104

Query: 59  --AKAAQNAGVT-----TKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
              K  +N  VT      + +    +D+  ++F+ +  VL    + ++        D  R
Sbjct: 105 VEKKFGKNLPVTEVHAKARAYALEQLDRQRQDFKRLG-VLGDWDNPYLTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG 122
           +L  +I +KG +++G
Sbjct: 164 VL-ARILEKGYVFRG 177


>gi|226355541|ref|YP_002785281.1| valyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317531|gb|ACO45527.1| putative valine--tRNA ligase (Valyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 920

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 157/389 (40%), Gaps = 77/389 (19%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F R+  + D++L   +   E  L  ER  +V       ++D ++SR+ + 
Sbjct: 371 PVEPIVSTQWFVRMKPFADQVLEGLDKG-EIKLTPERYTKVNRDWLENIRDWNISRQLW- 428

Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243
           WG +IP                       DP+Y          +   W  +     +T G
Sbjct: 429 WGHQIPAWYDDEGNIYVPDPEKPDLDCDKDPRYAHLNLRRDQDVFDTWFSSNLWPFSTLG 488

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
           + D       KF+P  + V G DIL F    +    + L+   P    V  HG  L  KG
Sbjct: 489 WPDTDAEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTGRAPF-STVMLHGLYLDAKG 547

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN +DP+E+ ++ GVDA R+        G+D  +D    ++  N   AN + N
Sbjct: 548 QKMSKSKGNGVDPLELFDQYGVDACRFAFTFLSTGGQDIKHDPRRFEQGRN--FANKLWN 605

Query: 361 L------------------------VSRSV----SMILKDYD--GMIPTPGAFTESDESI 390
                                    V R+V    + +L+     G++ T    T +D  I
Sbjct: 606 ATRFALMRLGEAAPNMTDDENLSAYVRRAVVPGNADLLRSQAVLGVLRTRDDLTLADRWI 665

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           +S  + V QE    ++   I  A+  + S   +   D Y +A KP      +  R  T L
Sbjct: 666 ISRLNAVTQEATAQLEAFDIGAAIRTLYSFTWDEFCDWYIEAAKP----ALSEGRLGT-L 720

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                V+  +  LL  F+P + +++++ L
Sbjct: 721 GTLKAVLEHILKLLHPFMPFVTSELYEAL 749



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA +  + D L RF R+ G + LF  GTD           +AG++T+V V++ 
Sbjct: 62  HLGHALDNTLIDTLIRFKRMRGFEALFLPGTD-----------HAGISTQVVVERQ 106


>gi|172039171|ref|YP_001805672.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700625|gb|ACB53606.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 909

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 32/300 (10%)

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           F+ +  +  +L +   D+G  I++  DP  ++  W  +     +T G+ DN    K  ++
Sbjct: 439 FIVAHSEQEALEKAKKDYGDTIQLEQDPD-VLDTWFSSGLWPFSTLGWPDNTQDLKT-YY 496

Query: 257 PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P    V G DI+ F    +   A   +  +P  + V+ HG +    G+K+SKS  N IDP
Sbjct: 497 PTSTLVTGFDIIFFWVARMTMMAGYFTDKMPF-QDVYIHGLVRDENGKKMSKSSNNGIDP 555

Query: 314 IEVIEEVGVDALRYFLVREIA-CGKDGF--YDK---DGLKKRVNADLANGIGNLVSRSVS 367
           + +IE+ G DALRY L++E+A  G+D    YD+   +      + + AN + N  +R V 
Sbjct: 556 LILIEKYGTDALRYTLIKEVAGAGQDISLQYDRKTDESESVEASRNFANKLWN-AARFVM 614

Query: 368 MILKDYDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           M LK   G  P      E      SD  ILS   + +Q+ R++++   +  A   +   +
Sbjct: 615 MHLK---GETPQSLGTPEIDKLELSDRWILSRFHQTVQQTRDDIKAYGLGEAAKGLYEFI 671

Query: 422 --SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D Y +  K   W+   +      T+ YV    ++    LL  F+P +  +I+  L
Sbjct: 672 WGDFCDWYIELVKTRLWDETPSREVARQTLAYVLDGTLK----LLHPFMPHITEEIWQTL 727



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+E  + DVL R+HR+ G + L   GTD
Sbjct: 45 SIVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMCGYNTLCLPGTD 89


>gi|124485230|ref|YP_001029846.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|124362771|gb|ABN06579.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 865

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 20/256 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W+D+    L  TG+    DGS +  ++PA L   G DI+R  A Y    L S  L 
Sbjct: 448 VLDTWMDSSITDLHVTGW----DGSGRPPYFPAQLRPQGHDIIRTWAFY--TILRSVALL 501

Query: 286 LPK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             K    +  +G +L + G K+SKS  NVI P +V+   GVDALR +     + G+D  +
Sbjct: 502 GEKPWDNILVNGMVLGEDGFKMSKSRDNVIGPEDVMGPYGVDALRQWAAAGSSTGQDILF 561

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQE 400
           + + +     +     + N+V  S+  I K  +  +P T    T  D  +L+  S+ + E
Sbjct: 562 NWNDVV--AASRFQTKMWNIVRFSLMQIQK--ESPVPETDAPSTLIDRWMLANLSKTVAE 617

Query: 401 IRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E+M   L  + L  +      V  D Y +  K   L   +P RA  + Y     +  L
Sbjct: 618 VTESMDAYLFDKGLKIIREFAWNVMADEYLEFVKG-RLYSEDPLRAGAI-YTLKTTLDAL 675

Query: 459 AILLQAFVPKLANKIF 474
             +L  ++P  A + +
Sbjct: 676 CTMLSPYIPFFAQECY 691



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ +  + T   YP  + HIGHA   +  D++AR+ R+ G +V+F  G D HG       
Sbjct: 35  KKPQYVMDTPPPYPTGKLHIGHALNWVYMDIIARYKRMMGFNVMFPQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +     TK   D +   FR M    D++ ++  R
Sbjct: 95  EETHHITK--NDVSREEFRKMCR--DLTVENITR 124


>gi|254482596|ref|ZP_05095835.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037287|gb|EEB77955.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 819

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y      YP+ + H+GH     IADV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYCLAMFPYPSGKLHMGHVRNYTIADVIARYQRMQGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  QN    R+    L  +Y  D  I T +  ++   +  + ++ +KG  YK
Sbjct: 92  KNNVPPAHWTAQNIDYMREQLRQLGFAYDWDREIATCDPDYYRWEQWFFTRLFEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
                 +   D+    +++V    DG  +    NPV+  E + +F +++ Y ++LL+   
Sbjct: 152 KKAEVNWCETDQTVLANEQV---VDGCCWRCD-NPVERREIDQWFIKITDYAEQLLTDLD 207

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 208 KLDQWPEQVRTMQR 221



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGE 301
            +A +W P D +V G +    H +Y   +        L+S++ P   ++ + G +L  G 
Sbjct: 520 GEADYWTPVDQYVGGIEHAILHLLYSRFYHKLLRDEGLVSSDEPF-IRLLTQGMVLKDGA 578

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKS GN +DP  +I++ G D +R F
Sbjct: 579 KMSKSKGNTVDPQSLIDQYGADTVRLF 605


>gi|226330822|ref|ZP_03806340.1| hypothetical protein PROPEN_04743 [Proteus penneri ATCC 35198]
 gi|225201617|gb|EEG83971.1| hypothetical protein PROPEN_04743 [Proteus penneri ATCC 35198]
          Length = 122

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 4/108 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           G+T +  +++ S+  +      +ISYD++  T    H +  R L  KI
Sbjct: 67  GITPEAMIEEMSKEHQQDFAGFNISYDNYHST----HSEESRQLSTKI 110


>gi|169832008|ref|YP_001717990.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|238688343|sp|B1I5R7|SYL_DESAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169638852|gb|ACA60358.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 826

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+   H+GH     I DV+ARF  + G DVL   G D  G     AA 
Sbjct: 32  RPKYYCLEMFPYPSGNLHMGHVRNYAIGDVVARFKTMRGYDVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N    R    +L +SYD    + T    ++   + L+ +   +G  YK
Sbjct: 92  QHGVPPARWTWDNINVMRTQLKLLGVSYDWRRELATCHPGYYRWTQWLFLQFYHRGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +         +++V  G   +   A    V+  E E +FFR++AY D+LL
Sbjct: 152 AKAPVNWCPSCATVLANEQVVAGGCERCKTA----VERRELEQWFFRITAYADRLL 203



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 82/190 (43%), Gaps = 17/190 (8%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           ++ P D ++ G +    H +Y   F        L+    P    + + G +L  G K+SK
Sbjct: 526 RWLPVDQYIGGVEHAILHLMYSRFFTKVLYDMGLVKVQEPF-TNLLTQGMVLKDGAKMSK 584

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P +++   G D  R F++      +D  +   G++              V R 
Sbjct: 585 SKGNVVSPEDILNRYGADTTRLFVLFAAPPERDLEWSDQGVEG------CYRFLQRVWRL 638

Query: 366 VSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
           V+ +  +  G  P P A     + S+  +  + ++++ E+++ +   + A++  + LV+ 
Sbjct: 639 VNSVADEIRGAAPVPSANLVGVNRSMRRLTHQTIKKVTEDIETRFNFNTAISAAMELVNG 698

Query: 424 VDRYFDAQKP 433
           +  + D   P
Sbjct: 699 MYHFRDRVAP 708


>gi|163734025|ref|ZP_02141466.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161392561|gb|EDQ16889.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 1038

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPA------FLLSANLPLPKKVFSHGFIL-HKGEKISKS 306
           K++P    + G DI+ F    W A      + ++   P    V+ H  +   KG+K+SKS
Sbjct: 622 KYFPTSTLITGFDIIFF----WVARMMMMQYAVTGQKPF-STVYVHALVRDEKGKKMSKS 676

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSR 364
           LGNVIDP+++I+E G DA+R+ L    A G+D       +   +     L N        
Sbjct: 677 LGNVIDPLDMIDEFGADAVRFTLTAMAAMGRDLKLSTQRIAGYRNFGTKLWNACRFAEMN 736

Query: 365 SVSMILKDYDGMIPT---PGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            V         +IPT   P A  E   ++ I+   ++V QEI   ++N   + A     +
Sbjct: 737 EVFAQRAARTDVIPTQNRPPADVEQAVNKWIIGETAKVRQEIDAALENYRFNDAANAAYA 796

Query: 420 LV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V     D Y +  KP    +TN + A+        V+ Q  ILL   +P +  +++
Sbjct: 797 FVWGKVCDWYVELSKPLLQDETNAEYAAETRATMAWVLDQCMILLHPVMPFITEELW 853



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA+   + D+L R+HR+ G D L+  GTD  G
Sbjct: 40 SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTDHAG 87


>gi|295399400|ref|ZP_06809382.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110041|ref|YP_003988357.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978866|gb|EFG54462.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215142|gb|ADP73746.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 880

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%)

Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239
           ++D  +SR+ + WG +IP                         DP  ++  W  +     
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHG 294
           +T G+ D       +++P D+ V G DI+ F    W + ++   L        K V  HG
Sbjct: 461 STMGWPDTEAPDYQRYYPTDVLVTGYDIIFF----WVSRMIFQGLEFTGKRPFKDVLIHG 516

Query: 295 FILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +   +G K+SKSLGN +DP++VI++ G D+LR+FL    + G+D  +  + ++   N  
Sbjct: 517 LVRDAQGRKMSKSLGNGVDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWN-- 574

Query: 354 LANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            AN I N  SR   M +    YD  +   G  T +D  IL+  +  ++ +
Sbjct: 575 FANKIWN-ASRFALMNMGGMTYD-QLDLSGEKTVADHWILTRLNETIETV 622



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++            T  + ++ + + R     L +   D+ R   T ++      R 
Sbjct: 103 KQGLSRYDLGREKFLEETWKWKEEYANHIRQQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  +  KG IY+G Y   W  +   A  + + VYK   G  Y+ ++
Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVYKEVKGALYHMRY 208


>gi|83589432|ref|YP_429441.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725764|sp|Q2RKZ1|SYL_MOOTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83572346|gb|ABC18898.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 829

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 6/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 31  DKPKFYCLEMFPYPSGNLHMGHVRNYSIGDVVARVKRMRGYNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+    +   N  N R     + ISY  D  + T    ++   + L+ ++   G  Y
Sbjct: 91  IHRGIPPAEWTWSNIANMRRQLHAMGISYDWDREVATCHPNYYRWTQWLFLQMYKHGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   +  +         +++V  GA  +     H PV   + E +FFR++ Y D+LL
Sbjct: 151 RKKAAVNWCPSCATVLANEQVVDGACERC----HTPVMRKDLEQWFFRITDYADRLL 203



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 23/194 (11%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +L  G K+SKS GN++ P E+I   G D  R F++      +D  +   G++
Sbjct: 568 QNLLTQGMVLKDGSKMSKSKGNIVSPEEIINRYGADTARLFILFAAPPERDLEWSDQGVE 627

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIREN 404
                    G    ++R   ++    D +    G+    + +D  +  +    ++++ E+
Sbjct: 628 ---------GCYRFLNRVWRLVGSYADAVRRAGGSLEIRSHADRELWRLLHATIKKVTED 678

Query: 405 MQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++ +   + A++ ++ LV+   RY D         T P+     L +  EV+R+L  LL 
Sbjct: 679 VEERFNFNTAISAIMELVNGCYRYQD---------TVPEEEQN-LVLMGEVLRKLVTLLA 728

Query: 464 AFVPKLANKIFDIL 477
            F P +  +++  L
Sbjct: 729 PFAPHITEELWQGL 742


>gi|302560654|ref|ZP_07312996.1| valyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302478272|gb|EFL41365.1| valyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 874

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M      G +P   A + +D  ILS  + V+ E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVQGPLPDASAMSSTDRWILSRLNSVVAEV 627


>gi|229167050|ref|ZP_04294794.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228616403|gb|EEK73484.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 1033

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    NP++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|189083246|sp|A8FGG0|SYL_BACP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 804

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    +
Sbjct: 28  EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF ++N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL
Sbjct: 148 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEDIDWPESIKDMQR 219



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297
           L +P+  K K+ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL
Sbjct: 512 LASPEKLK-KWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFMKLFNQGMIL 570

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               EK+SKS GNV++P +++E  G D LR +
Sbjct: 571 GENNEKMSKSKGNVVNPDDIVESHGADTLRLY 602


>gi|157693425|ref|YP_001487887.1| leucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157682183|gb|ABV63327.1| leucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 849

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    +
Sbjct: 73  EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 132

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF ++N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 133 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 192

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL
Sbjct: 193 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 247

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 248 EDLEDIDWPESIKDMQR 264



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297
           L +P+  K K+ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL
Sbjct: 557 LASPEKLK-KWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFMKLFNQGMIL 615

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               EK+SKS GNV++P +++E  G D LR +
Sbjct: 616 GENNEKMSKSKGNVVNPDDIVESHGADTLRLY 647


>gi|309776468|ref|ZP_07671454.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915859|gb|EFP61613.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 875

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 17/188 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-----S 281
           ++  W  +     +T G+       K +++P D+ V G DI+ F    W A +       
Sbjct: 445 VLDTWFSSALWPFSTLGWPQETADLK-RYFPNDVLVTGYDIIFF----WVARMAFQTRYC 499

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            N    K V  HG +   +G K+SKSLGN IDP++VI E GVDALR+FL      G+D  
Sbjct: 500 MNSRPFKDVLIHGLVRDAQGRKMSKSLGNGIDPMDVIAEHGVDALRFFLTTNSTPGQDLR 559

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVL 398
           Y  +  K   +A+  N I N  SR V M + + D  +P       S  D+ IL   + VL
Sbjct: 560 YIDE--KVAASANFINKIWN-ASRFVLMQIPE-DMEVPDIDLSNASMIDKWILKRFNEVL 615

Query: 399 QEIRENMQ 406
           + +  NM+
Sbjct: 616 ESVTANME 623



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 11/59 (18%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79
          H+GHA++  + D+++R+ R+ G D+L+  G D           +AG+ T+  VD+  +N
Sbjct: 52 HLGHAWDTTLQDIVSRYKRMQGYDMLWLPGMD-----------HAGIATQAKVDERLKN 99


>gi|194334635|ref|YP_002016495.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312453|gb|ACF46848.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 902

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 31/264 (11%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------NL 284
           W+  +T    T G+ +N D     F+P    V G DI+ F    W A ++ A      ++
Sbjct: 466 WLWPMTTLGWTGGHQENDD--LKSFYPTSTLVTGPDIIFF----WVARMIMAGIYFNGDI 519

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P     F+      KG K+SKSLGN  DP++VI+  G DALR+ +V     G+D  + ++
Sbjct: 520 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEE 579

Query: 345 GLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             K  +  + A  I N   LV      +  D D       AF+    SI      +L   
Sbjct: 580 --KCELGRNFATKIWNATRLVFMQREKVFDDMDSFRHAYEAFSFDSLSIQGADRWILG-- 635

Query: 402 RENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYV 450
           R +   +  H A AQ     ++ ++ +       D Y +A K  EL  ++ D A+  + +
Sbjct: 636 RYHRMLEAYHHAFAQFRLNDIVKIIYDFFRGDYCDWYLEALKV-ELAGSSHDEAADRVCL 694

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
            V ++  +  +L   +P L ++I+
Sbjct: 695 AVSILEGVLKVLHPVMPFLTDEIW 718


>gi|311107263|ref|YP_003980116.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310761952|gb|ADP17401.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 953

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 13/202 (6%)

Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D    GS      WPADL++ G D  R  FH+      +L    
Sbjct: 546 VWFDSGSTHATVLGGKDGDFAGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEI 401
             + KRV  +    I N + R +   L D+D +      G   E D   L++ +++  E+
Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANLADFDAVTQAVPYGELFEIDRYALAMTAQMQAEV 720

Query: 402 RENMQNQLIHRALAQVISLVSE 423
           + N +    H A++++ +  SE
Sbjct: 721 QANYERYDFHPAVSRLQTFCSE 742



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K    A V +K        +D+  ++F+ +  VL      ++        D  R
Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLG-VLGEWDRPYMTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            L  +I DKG +++G      C+    +L +      D V    D  +  A+H
Sbjct: 164 AL-GRILDKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAVDVAFPFAEH 215


>gi|297160520|gb|ADI10232.1| valyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 877

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 23/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ ++  GS  KF+P  + V G DIL F       F L A    
Sbjct: 457 VLDTWFSSGLWPFSTLGWPED-TGSLRKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DA+R+ L R    G D    +
Sbjct: 516 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDQYGSDAVRFTLARGANPGVDVPIGE 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  + V+ E+  
Sbjct: 576 DWVQASRN--FANKIWN-ATRFALMNGATVEGELPAAERLSAADRWILSRLNTVVAEVDA 632

Query: 403 -------ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
                    + + L H A  +V     E+ +   AQ          + A     V  EV+
Sbjct: 633 YYEDYQFAKLSDVLYHFAWDEVFDWYVELSKTTFAQ--------GGEAADASRRVLGEVL 684

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  LL   VP +  K++  L
Sbjct: 685 DVMLRLLHPVVPFVTEKLWTAL 706


>gi|302655666|ref|XP_003019618.1| hypothetical protein TRV_06336 [Trichophyton verrucosum HKI 0517]
 gi|291183353|gb|EFE38973.1| hypothetical protein TRV_06336 [Trichophyton verrucosum HKI 0517]
          Length = 600

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 211/516 (40%), Gaps = 69/516 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  + I++A+ + N  PH+G+    II           G++ L+  GT E+G      A 
Sbjct: 12  QRNILITSALPFVNNVPHLGN----IIGG--------RGINTLYVGGTGEYGTTTEAKAL 59

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   D+      ++ +  +IS+D F RTT +   +    ++ K+   G + +  
Sbjct: 60  AENCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITLDIFLKLEKNGFLEERM 119

Query: 124 YSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPV----QWMEE---------------- 162
            +  Y     ++  D  V  +  D  Y NA+ +      Q +E                 
Sbjct: 120 TTQLYCEEHHSFLADRFVEGECPDCGYANARGDQCDLCGQLLESLQLRNPRCKIDGSTPV 179

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDW 216
               +  F  L   Q K+ ++++              VI  S++K GLK  S++R    W
Sbjct: 180 TRDTKHIFLELDKLQAKVENFFQDSTAN-GSWSNNGAVITASWLKEGLKPRSITRD-ISW 237

Query: 217 GIKIPDDPQY---IMYVWIDALTNYLTTTG-YLDNPDGSKAKFW--PADLHV---IGKDI 267
           G ++P  P Y   ++Y W DA   Y++ T  Y D  +    ++W  P D+ +   IGKD 
Sbjct: 238 GTRVPL-PGYEDKVIYSWFDACIGYVSITARYTDQWE----RWWRSPKDVQLYQFIGKDN 292

Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDA 324
           + FH++ +PA  +       +   + +  ++ ++G K SKS G  V         +  D 
Sbjct: 293 VVFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADI 352

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPT---- 379
            R FL+       D  +  D      N  L   +GN VSR +  +  + Y+ ++P     
Sbjct: 353 WRCFLLSHRPETGDSEFTWDAFINCNNNLLLKNLGNFVSRVLKFVNSRHYNNIVPNWTQY 412

Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELK 437
             G+F    E I    +R+L +    +    I  A + V+ +  + + +    +    L 
Sbjct: 413 LEGSFATFKEEI----NRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLA 468

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +  P + + V+ + +  +  LA L+  ++P  AN I
Sbjct: 469 ENEPSKCAAVIGIAINTVHLLASLVAPYMPDTANSI 504


>gi|194017807|ref|ZP_03056416.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010459|gb|EDW20032.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 830

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    +
Sbjct: 54  EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF ++N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 173

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL
Sbjct: 174 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 228

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 229 EDLEDIDWPESIKDMQR 245



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297
           L +P+  K K+ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL
Sbjct: 538 LASPEKLK-KWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFMKLFNQGMIL 596

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               EK+SKS GNV++P +++E  G D LR +
Sbjct: 597 GENNEKMSKSKGNVVNPDDIVESHGADTLRLY 628


>gi|77919014|ref|YP_356829.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123729465|sp|Q3A4P8|SYL_PELCD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77545097|gb|ABA88659.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 851

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 21/200 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  REKYYLLEMFPYPSGRIHMGHVRNYSIGDVVARFKRLQGYNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +  +N  N R     +  SY  D  + T    ++   ++++ K+ +KG  Y 
Sbjct: 92  QHKTHPGKWTYENIDNMRAQLKKMGFSYDWDREVATCHPEYYRWEQLIFLKMLEKGLAYK 151

Query: 121 KGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           K  +  W S     L +E   ND     G            V+  E E +FF+++ Y  +
Sbjct: 152 KSSFVNWCSECQTVLANEQVENDACWRCG----------TVVEQKELEQWFFKITDYAQE 201

Query: 176 LL---SYYESHPEFILPIER 192
           LL   S     PE +L ++R
Sbjct: 202 LLDDTSKLSGWPEPVLTMQR 221


>gi|50914656|ref|YP_060628.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822714|sp|Q5XAW8|SYV_STRP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50903730|gb|AAT87445.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 882

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++     V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TERQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|238809718|dbj|BAH69508.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 843

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 57/359 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +L + +S        +R   VI      + D +
Sbjct: 353 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 412

Query: 209 LSRKTFDWGIKIP----DDPQYIMYV-----WI---DALTNYLTTT----GYLDNPDGSK 252
           +SR+ + WG +IP    DD   +        W+   D L  + ++      +L  P  + 
Sbjct: 413 ISRQLW-WGHRIPAWYKDDKVKVQIESPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 471

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKIS 304
              +++P  L V G DI+ F    W A +    L   K     +V  HG +  + G+K+S
Sbjct: 472 LLKRYYPTSLLVTGYDIIFF----WVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMS 527

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DPI+VI E G DALR+F++   + G D  Y K+ +       L N + N ++R
Sbjct: 528 KSSNNGVDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWN-IAR 584

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421
            + ++ +D +         T +D  I +    + + I + MQN    ++   L++ I   
Sbjct: 585 YIQLLPEDKE------NKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFI--- 635

Query: 422 SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 ++    W  EL K  P++ +      ++ ++ L ++   F+P + + ++ +LF
Sbjct: 636 ------YNDFSSWYVELLKIMPNKKA-----ALDNLKSLLLIAHPFLPFITDHLYKVLF 683



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           HIGHA +  I D + R+ +L G DV +  G D  G       +N 
Sbjct: 61  HIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKVENT 105


>gi|260878357|ref|ZP_05890712.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308090259|gb|EFO39954.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 790

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATLAAENNPE 276


>gi|239979443|ref|ZP_04701967.1| valyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291451313|ref|ZP_06590703.1| valyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291354262|gb|EFE81164.1| valyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 873

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 32/225 (14%)

Query: 204 LKDLSLSRKTFDWGIKIP---------------DDPQY---------IMYVWIDALTNYL 239
           L+D  +SR+ + WG +IP               ++P           ++  W  +     
Sbjct: 407 LRDWCISRQLW-WGHRIPIWYGPDGEIVCVGPDEEPPGGEGWHQETDVLDTWFSSGLWPF 465

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFIL 297
           +T G+ +  D S AKF+P  + V G DIL F       F L A    P    +  HG + 
Sbjct: 466 STLGWPEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVR 524

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            + G+K+SKS GN ++P++ ++  G DALR+ L R    G D    +D ++   N   AN
Sbjct: 525 DQFGKKMSKSFGNAVNPLDWMDAYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FAN 582

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            I N  +R   M     +G +P     + +D  ILS  + V+ E+
Sbjct: 583 KIWN-ATRFALMNGATVEGELPAAEELSATDRWILSRLNTVVAEV 626


>gi|323699457|ref|ZP_08111369.1| valyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459389|gb|EGB15254.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 888

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 58/316 (18%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP              + ++  W  + 
Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCEECGELIVAKEDPTVCPKCGSSRLVQDEDVLDTWFSSA 458

Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
               +T G+   PD +K  AK++P    V G DIL F    W A ++   L    +V  H
Sbjct: 459 LWPFSTMGW---PDDTKELAKYYPTSCLVTGFDILFF----WVARMMMMGLQFMGEVPFH 511

Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +H      +G+K+SKS GNVIDP+++I + G DALR+ L    A G+D    +  ++
Sbjct: 512 HVYIHALVRDEQGKKMSKSTGNVIDPLDMIGKYGADALRFTLTSFAAMGRDIKLSEQRIE 571

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-- 405
              +    N + N  +R   M L D   +IP       SD +   +  R L+E++E +  
Sbjct: 572 GYKH--FMNKVWN-ATRFAMMNLPD---VIPDADVHEASDLADRWILHR-LEEVKETVAS 624

Query: 406 -QNQLIHRALAQVIS--LVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             N      +AQ +   + SE  D Y +  KP  L   +         V   V+ +  IL
Sbjct: 625 ATNDYRFNEIAQTLYKFIWSEFCDWYLEMIKP-ALYGEDERAKEATQRVLWTVLSETMIL 683

Query: 462 LQAFVPKLANKIFDIL 477
           L    P +  +I+++L
Sbjct: 684 LHPVTPFITQEIWNVL 699



 Score = 43.5 bits (101), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 24/154 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     H+GHA  + + D+L RF+R  G +VL+  GTD  G      + +  +
Sbjct: 41  SIVIPPPNVTGVLHMGHALNLTLQDILCRFNRQQGRNVLWVPGTDHAGIATQNVVERQLK 100

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T                 K   D      R M   +D + + F  T +++     R
Sbjct: 101 AEGLTRDDLGRDKFIERVWEWKKEKGDHILSQIRRMGASVDWTRECF--TFDEQRAKAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++  + ++G IYKG Y   +  R      DDEV
Sbjct: 159 EVFVALYEQGLIYKGDYIINWCNRCHTALADDEV 192


>gi|229059882|ref|ZP_04197257.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719427|gb|EEL71030.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 1033

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTRK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    NP++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|218245548|ref|YP_002370919.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166026|gb|ACK64763.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 909

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 41/322 (12%)

Query: 184 PEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNY 238
           P + +  E  NE+     F+ +  +D ++ +    +G  I +  DP  ++  W  +    
Sbjct: 419 PAWYVISETNNEITDHTPFIVADNEDEAIKKAQEQYGENITLEQDPD-VLDTWFSSGLWP 477

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFI 296
            +T G+ +N +    +++P    V G DI+ F    +   A   +  +P  K V+ HG +
Sbjct: 478 FSTLGWPENTE-DLTRYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQIPF-KDVYIHGLV 535

Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GFYDKDGLKKRVN 351
               G+K+SKS  N IDP+ +I+  G DALRY L++E+A  G+D    +  K    + V 
Sbjct: 536 RDENGKKMSKSANNGIDPLILIKNYGTDALRYTLIKEVAGAGQDISLQYNRKTDESESVE 595

Query: 352 A--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR--------VLQEI 401
           A  + AN + N  +R V M L+       TP      D   L +C R        ++Q+ 
Sbjct: 596 ASRNFANKLWN-AARFVMMNLQGN-----TPKTLGVPDREKLELCDRWILSRFHQLVQQT 649

Query: 402 RENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVI 455
           R  ++N  +  A   +   +     D Y +  K    K +N +       T+ YV    +
Sbjct: 650 RNYVENYGLGEAAKGLYEFIWGDFCDWYIELVKTRLWKDSNTESRLVAQQTLAYVLDNTL 709

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           R    LL  F+P +  +I+  L
Sbjct: 710 R----LLHPFMPHITEEIWQTL 727



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+E  + DVL R+HR+ G + L   GTD
Sbjct: 43 SIVIPPPNVTGSLHMGHAFEDCLMDVLMRYHRMCGHNTLCLPGTD 87


>gi|239827910|ref|YP_002950534.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808203|gb|ACS25268.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 880

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%)

Query: 204 LKDLSLSRKTFDWGIKIP------------------------DDPQYIMYVWIDALTNYL 239
           ++D  +SR+ + WG +IP                         DP  ++  W  +     
Sbjct: 403 IRDWCISRQLW-WGHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPF 460

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHG 294
           +T G+ D       +++P D+ V G DI+ F    W + ++   L        K V  HG
Sbjct: 461 STMGWPDTEAPDYKRYYPTDVLVTGYDIIFF----WVSRMIFQGLEFTGERPFKDVLIHG 516

Query: 295 FILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +   +G K+SKSLGN +DP++VI++ G D+LR+FL    + G+D  +  + ++   N  
Sbjct: 517 LVRDAQGRKMSKSLGNGVDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWN-- 574

Query: 354 LANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            AN I N  SR   M +    YD  +   G  T +D  IL+  +  ++ +
Sbjct: 575 FANKIWN-ASRFALMNMGGMTYD-QLDLSGEKTVADHWILTRLNETIETV 622



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLR 102

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++            T  + ++ + + R     L +   D+ R   T ++      R 
Sbjct: 103 KQGLSRYDLGREKFLEETWKWKEEYASHIRQQWAKLGLGL-DYTRERFTLDEGLSKAVRE 161

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  +  KG IY+G Y   W  +   A  + + +YK   G  Y+ ++
Sbjct: 162 VFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVIYKEVKGALYHMRY 208


>gi|262039366|ref|ZP_06012679.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746628|gb|EEY34154.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 883

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 23/279 (8%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDI 267
           +RK F   + + ++   ++  W  +     +T G+   P+ +K   KF+P D  V G DI
Sbjct: 437 ARKKFGKDVDLREETD-VLDTWFSSALWPFSTMGW---PEKTKDLEKFFPTDTLVTGADI 492

Query: 268 LRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321
           L F    W A ++  +L +  +     V+ HG I  + G K+SKSLGN  DP+ +I++ G
Sbjct: 493 LFF----WVARMIMMSLYIMDEIPFNYVYLHGLIRDEIGRKMSKSLGNSPDPLNLIDKYG 548

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TP 380
            DA+RY  +   + G+D  + +  ++  + +  AN I N VS+ V   L+D++     T 
Sbjct: 549 ADAIRYSFLYNTSQGQDIHFSEKLME--MGSTFANKIWN-VSKFVLSNLEDFNTETSVTD 605

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
             F   D  ILS       +I E M    +  A   V         D Y +  K      
Sbjct: 606 LEFKLEDTWILSKLQSAAAKINEYMNGYELDNAAKAVYEFFRGEFCDWYVEIAKTRVYGG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D+  T  +V   V+     +L  F+P +  +I+  L
Sbjct: 666 EGTDKV-TAQWVLRHVLDSGLKMLHPFMPFITEEIWQKL 703



 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 24/159 (15%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   S  I  PN     H+GH  +  I D + R+ R+ G D L+  GTD  G     K+
Sbjct: 35  EKPGYSIVIPPPNVTGILHMGHMLDNAIQDTIIRYKRMSGFDTLWVPGTDHAGIATQNKV 94

Query: 59  AKAAQNAGVTTKVFVDQN----------------SRNFRDMADVLDISYDDFIRTTEKRH 102
            +  ++ G + +    +                 ++  R +   LD S + F  T ++  
Sbjct: 95  ERMLKDEGTSKEEIGREEFLKRTWEWKEKHGGLITKQLRRLGVSLDWSRERF--TMDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               + ++ K+ + G IY+G Y   +   D+    DDEV
Sbjct: 153 SKAVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEV 191


>gi|288930565|ref|YP_003434625.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892813|gb|ADC64350.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 864

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 13/256 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L   G+ +     + K +P  L   G DI+R  A Y    +  L   +
Sbjct: 444 VLDTWMDSSITPLAIVGWPE-----ELKEYPTHLRPQGHDIIRTWAFYTILRSIYLVNQI 498

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +   +   G K+SKSLGN ++  EVIE+ G D LR +       G D  +   
Sbjct: 499 PWYEIVINGMVLGEDGRKMSKSLGNYVEAEEVIEKYGADCLRQWAAIGGVVGSDVAFSWK 558

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K   +A         ++R  +M L++Y+          ++D  ILS  +++++E+ E 
Sbjct: 559 EIK---SASRFQQKFWSLTRFSAMHLENYEPKDEHEQYLRDADRWILSKLNKLVKEVDEA 615

Query: 405 MQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M+N     AL  +   +     D Y +  K   L   +        Y   +V+  L  LL
Sbjct: 616 MENYSFSEALKLIRGFTWYEFADNYVELVKN-RLYSGDEKEKLAARYTLYKVMNALIRLL 674

Query: 463 QAFVPKLANKIFDILF 478
             F P L+ + +++LF
Sbjct: 675 APFTPFLSEECWNVLF 690



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 15/129 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGV 67
           I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG     K  +  G+
Sbjct: 36  IDTPPPYPTGSFHIGNALNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVKVEELYGI 95

Query: 68  TT---------KVFVDQNSRNFRDMADV-----LDISYDDFIRTTEKRHHDTCRILWKKI 113
                      ++ V+   RN + M +      L I +     T    ++   ++ + ++
Sbjct: 96  KKNDVPREKFRELCVEFTERNIKRMKETMKKLGLSIDWSKEYVTMYPEYYRKTQVSFVRL 155

Query: 114 SDKGDIYKG 122
            +KG IYKG
Sbjct: 156 YEKGWIYKG 164


>gi|162456513|ref|YP_001618880.1| hypothetical protein sce8230 [Sorangium cellulosum 'So ce 56']
 gi|161167095|emb|CAN98400.1| metS [Sorangium cellulosum 'So ce 56']
          Length = 641

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 30/316 (9%)

Query: 216 WGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSK----AKFW--PAD--LHVIG 264
           WGI I +DP      +YVW D+L   ++ +       G      A FW  P    +  +G
Sbjct: 325 WGIPITEDPDLAGKTLYVWPDSLIAPISFSKVALRDKGVDPARYADFWRDPEARVVQFLG 384

Query: 265 KDILRFHAIYWPAFLLSAN-----LPLPKK-----VFSHGFILHKGEKISKSLGNVIDPI 314
           +D + F+ +   A  L        LP   +     VF    +L  GEK+SKS GN     
Sbjct: 385 QDNVYFYVLMQGAMWLGTQEDPRRLPAAGELQLTDVFGCFHLLVGGEKMSKSRGNFFTGD 444

Query: 315 EVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           ++++E G  VD +RY+L       K   +D + L +R N  LA  +     R +S +   
Sbjct: 445 QLLDEKGYSVDQIRYYLALLSLAEKPSDFDFEKLDER-NKFLAGPMNAAFERPISAVHSK 503

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G +P  GA     + +++   R++Q     M        L ++ +    ++  F   K
Sbjct: 504 FGGKVPE-GALL---DKVVADTVRIVQRYVRAMDRADYPNLLFEIENYARTINSLFTQYK 559

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P + +     R    LY +  V++ L I+L  FVP+  +++   L +  E    + L   
Sbjct: 560 PHDDRHPEQGR-RDALYTSFYVLKTLMIMLYPFVPETMDRLRASLRLPPEVFRLEELGTP 618

Query: 493 LKPGFMLHKTFDPIFP 508
           +  G  +     P FP
Sbjct: 619 IPAGHEIGAK-QPYFP 633



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQK 57
           ++  +++ ++  + Y N   H+GH A   + AD+ AR+ R+     +VL+  GTDEHG  
Sbjct: 18  LRRPKRMVVTAGMPYANGPLHLGHLAGAQLPADIYARWCRMLIGAENVLYVCGTDEHGST 77

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
              AA  AG+  + ++D+  +  +   +   IS D F  T++
Sbjct: 78  SEIAAVQAGLPIREYIDRIQQAQKKTLERYCISLDAFTGTSQ 119


>gi|52081521|ref|YP_080312.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786900|ref|YP_092729.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647431|ref|ZP_08001652.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|60390680|sp|Q65FX8|SYL_BACLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52004732|gb|AAU24674.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349402|gb|AAU42036.1| LeuS [Bacillus licheniformis ATCC 14580]
 gi|317390477|gb|EFV71283.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 804

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF +QN  NFR     L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAVFTEQNIDNFRRQIRALGFSYDWDREVNTTDPDYYKWTQWIFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPESIKEMQR 219



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 11/88 (12%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFIL-HKG 300
            K K W P D+++ G +    H +Y   W  FL    + +P     K++++ G IL    
Sbjct: 516 EKLKEWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGV-VPTKEPFKQLYNQGMILGENN 574

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           EK+SKS GNV++P E++E  G D LR +
Sbjct: 575 EKMSKSKGNVVNPDEIVETHGADTLRLY 602


>gi|322383210|ref|ZP_08057021.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152479|gb|EFX45265.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 906

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 14/154 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D  K +++P ++ V G DI+ F    W A ++ ++L  
Sbjct: 475 VLDTWFSSALWPFSTLGWPEQTDDLK-RYFPTNVLVTGYDIIYF----WVARMIFSSLEF 529

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN IDP+EVI++ G DA+RY L      G+D  
Sbjct: 530 TGQIPFKDVLVHGLVRDAEGRKMSKSLGNGIDPLEVIKQYGADAMRYMLSTSSTPGQDLR 589

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +  + +++  N   AN I N  SR   M L+ ++
Sbjct: 590 FRWERVEQARN--FANKIWN-ASRFALMNLEGFN 620



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           ERE   I           HIGHA +  + D++ R  R+ G D L+  G+D  G     K+
Sbjct: 60  EREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGSDHAGIATQTKV 119

Query: 59  AKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  GV+                 +++       +  M   LD S + F  T ++  
Sbjct: 120 EQKLREEGVSRYDLGREAFLEKVWDWKELYAGTIREQWGKMGLSLDFSRERF--TLDEGL 177

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
               R ++ K+ DKG IY+G Y   +        +D EV YK   G  Y+ ++
Sbjct: 178 SKAVRKVFVKLYDKGLIYRGKYIINWDPAARTALSDIEVEYKEIQGNLYHLEY 230


>gi|308069864|ref|YP_003871469.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA
           ligase) [Paenibacillus polymyxa E681]
 gi|305859143|gb|ADM70931.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA
           ligase) [Paenibacillus polymyxa E681]
          Length = 1029

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + +L+  
Sbjct: 512 VIDVWFDSGSMPFAQHHYPFENNETFEQQF-PADMICEGIDQTRGWFYSLLAVSTMLTGK 570

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V + G +L  +G+K+SKS GNVIDP EVI+E G DA R+ L+ + A      + 
Sbjct: 571 APY-KAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAFRWALLSDSAPWNSKRFS 629

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVL 398
           K G+     + L + + N  + +   +  D DG  P    F  S    D  ILS      
Sbjct: 630 K-GIVGEAKSKLVDTLVN--THAFLTLYADIDGFDPAQHPFKPSAHKLDRWILS------ 680

Query: 399 QEIRENMQNQLIHRALA--QVISLVSEVDRYFDAQKPWELKKT---------NPDRASTV 447
              R N    ++ +ALA    ++    ++ + D    W ++++           D+    
Sbjct: 681 ---RLNSLILVVDKALAVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGLTEDKLDAY 737

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
             +T EV+   A LL  F P LA  I+
Sbjct: 738 RTLT-EVLLTTAKLLAPFTPLLAEDIY 763



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N +PHIGH    +I D + R+  + G  V+   G D HG  +    Q   G++ K  +++
Sbjct: 50  NGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELGVQKQLGISHKPEIEE 109


>gi|227488335|ref|ZP_03918651.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091697|gb|EEI27009.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 886

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 62/312 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 418 MHDWTISRQLW-WGHRIPIWYGPNDEVVCCGPDDTPPEGYTQDPD-VLDTWFSSALFPFS 475

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------------ANLPLPK 288
           T G+ D+ D  K KF+P  + V   DIL     +W A ++               +P   
Sbjct: 476 TMGWPDSTDDLK-KFYPTSVLVTAYDIL----FFWVARMMMFGTYAGQMTEGLGEVPF-T 529

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +F HG +   +G K+SKSLGN I+P++ +E+ G DALR+ L R    G D     D   
Sbjct: 530 DLFLHGLVRDERGRKMSKSLGNGINPMDWVEDYGADALRFALARGANPGVDLPLGSDA-- 587

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
               +   N +  L + +   + +  D     P   +++D  IL   + V +++ E + +
Sbjct: 588 ---GSSARNFVTKLFNAARFALSRGADASAELPAELSDADRWILDRLNEVTRDVNELLDD 644

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               +A  ++   V      +D    W  EL KTN   A     V   V+ Q+  LL   
Sbjct: 645 YQFAKANEEMFHFV------WDELCDWYLELSKTNFQPA-----VMGHVLDQVLRLLHPT 693

Query: 466 VPKLANKIFDIL 477
           +P +   ++  L
Sbjct: 694 MPFVTETLWTAL 705


>gi|157962960|ref|YP_001502994.1| leucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157847960|gb|ABV88459.1| leucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 868

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 18/256 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     A
Sbjct: 39  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 99  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      V+  E   +F +++ Y ++LL+ 
Sbjct: 159 YKKTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLND 214

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               E  PE +  ++R    R+E I         ++ S ++FD     PD    + YV I
Sbjct: 215 IDTLEEWPEQVKTMQRNWIGRSEGIEMTFQ----VAGSDQSFDIYTTRPDTVMGVTYVAI 270

Query: 233 DALTNYLTTTGYLDNP 248
            A  + L     ++NP
Sbjct: 271 -AAGHPLAEQAAINNP 285


>gi|189083234|sp|A8H7C2|SYL_SHEPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 18/256 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLND 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               E  PE +  ++R    R+E I         ++ S ++FD     PD    + YV I
Sbjct: 206 IDTLEEWPEQVKTMQRNWIGRSEGIEMTFQ----VAGSDQSFDIYTTRPDTVMGVTYVAI 261

Query: 233 DALTNYLTTTGYLDNP 248
            A  + L     ++NP
Sbjct: 262 -AAGHPLAEQAAINNP 276


>gi|119510813|ref|ZP_01629939.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119464576|gb|EAW45487.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 1010

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 24/294 (8%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPA 258
            KS  +    ++  F   +K+  DP  ++  W  +     +T G+ +  PD     ++P 
Sbjct: 440 AKSADEAWEKAKSQFGADVKLEQDPD-VLDTWFSSGLWPFSTLGWPEQTPD--LETYYPN 496

Query: 259 DLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
              V G DI+ F    W A +       +  +P    V+ HG +L   G+K+SK+ GN I
Sbjct: 497 STLVTGFDIIFF----WVARMTMMGGHFTGKMPF-NDVYIHGLVLDENGQKMSKTKGNGI 551

Query: 312 DPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMI 369
           DP+ +I++ G DALRY L++E+A  G++   + D  K +  + + +    N +  +   +
Sbjct: 552 DPLLLIDKYGTDALRYTLIKEVAGAGQNIRLEYDRKKDESASVEASRNFANKLWNAARFV 611

Query: 370 LKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           + + DG  P     P     SD  ILS   +V+ +    + N  +  A   +   +    
Sbjct: 612 MMNLDGQTPAQLGEPIPTELSDTWILSRYHQVINQTSNYIDNYGLGEAAKGLYEFIWGDF 671

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K    K  +P        +   V+  +  LL   +P +  +I+  L
Sbjct: 672 CDWYIELVKSRLQKDADPASRKVAQQILGYVLEGILKLLHPLMPHITEEIWQTL 725



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFESALIDTLIRYHRMKGRNTLWVPGTD 87


>gi|319776933|ref|YP_004136584.1| valyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038008|gb|ADV34207.1| Valyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 832

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 57/359 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +L + +S        +R   VI      + D +
Sbjct: 342 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 401

Query: 209 LSRKTFDWGIKIP----DDPQYIMYV-----WI---DALTNYLTTT----GYLDNPDGSK 252
           +SR+ + WG +IP    DD   +        W+   D L  + ++      +L  P  + 
Sbjct: 402 ISRQLW-WGHRIPAWYKDDKVKVQIESPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 460

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKIS 304
              +++P  L V G DI+ F    W A +    L   K     +V  HG +  + G+K+S
Sbjct: 461 LLKRYYPTSLLVTGYDIIFF----WVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMS 516

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DPI+VI E G DALR+F++   + G D  Y K+ +       L N + N ++R
Sbjct: 517 KSSNNGVDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWN-IAR 573

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQVISLV 421
            + ++ +D +         T +D  I +    + + I + MQN    ++   L++ I   
Sbjct: 574 YIQLLPEDKE------NKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFI--- 624

Query: 422 SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 ++    W  EL K  P++ +      ++ ++ L ++   F+P + + ++ +LF
Sbjct: 625 ------YNDFSSWYVELLKIMPNKKA-----ALDNLKSLLLIAHPFLPFITDHLYKVLF 672



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
          HIGHA +  I D + R+ +L G DV +  G D  G       +N 
Sbjct: 50 HIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKVENT 94


>gi|260892906|ref|YP_003239003.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865047|gb|ACX52153.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 916

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 7/107 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L  P     + WPADL++ G D  R  F++    A  ++   
Sbjct: 524 IMDVWFDSGSSHWAV---LRQPSPWPDQHWPADLYLEGSDQHRGWFNSSLSTAVAITGQP 580

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G K+SKSLGNV+DP EV+ ++G D LR ++ 
Sbjct: 581 PY-RAVLTHGFVVDEEGRKMSKSLGNVVDPQEVMTKLGADILRLWVC 626



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 26/57 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           R K  +     Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I +
Sbjct: 47  RPKFILHDGPPYANGHIHLGHVLNKVLKDIIIKYRSMSGYDAPYIPGWDTHGLPIEQ 103


>gi|314933819|ref|ZP_07841184.1| valine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653969|gb|EFS17726.1| valine--tRNA ligase [Staphylococcus caprae C87]
          Length = 876

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDTESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +++    I   G  + +D+ IL+  +  ++
Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSLMNIGEEFKVEDIDLSGNLSLADKWILTRLNETIK 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G  IA
Sbjct: 30 EDKSKDTYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAG--IA 87

Query: 60 KAAQ 63
            A+
Sbjct: 88 TQAK 91


>gi|33864455|ref|NP_896015.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33641235|emb|CAE22365.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 947

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 32/289 (11%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           +R  F   + I  D + ++  W  +     +T G+ D        ++P    V G DI+ 
Sbjct: 482 ARDQFGEAVVIQQD-EDVLDTWFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIF 540

Query: 270 FHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           F    +   A   +  +P    V+ HG +   +  K+SKS GN IDP+ +IE  G DALR
Sbjct: 541 FWVARMTMMAGAFTGRMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALR 599

Query: 327 YFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           + LVRE+A  G+D   D D         + A    N +  +    L +  G   TP +  
Sbjct: 600 FALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNATRFALMNLGG--ETPASLG 657

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHR----ALAQVISLVSE------VDRYFDAQKPW 434
           E D + L +  R +      M   ++ R     L +    + E       D Y +  K  
Sbjct: 658 EPDPASLQLADRWILSRLARMNRDVVERYDSYRLGEAAKCLYEFAWNDICDWYLELSK-- 715

Query: 435 ELKKTNP--DRASTVL-------YVTVEVIRQLAILLQAFVPKLANKIF 474
             ++ +P  D +  VL        V  +V+  L ++L   +P L+ +++
Sbjct: 716 --RRLHPGEDASGEVLADQCTARQVLAKVLADLLVMLHPLMPHLSEELW 762



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
           S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 71  SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 115


>gi|150390081|ref|YP_001320130.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|229559881|sp|A6TQK3|SYL_ALKMQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149949943|gb|ABR48471.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 824

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 10/180 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 28  RDRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKRMKGYNVLHPMGWDSFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N +  ++  D L +SY  D  + T    ++   + L+ +   KG  
Sbjct: 88  AIKHGIHPDHWTKENVKEMKEQLDALGLSYDWDREVSTCTPEYYKWTQWLFLQFYHKGLA 147

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK      W    +    N+  V  G D       + N  QW      +F+++ Y + LL
Sbjct: 148 YKKESQVNWCPSCETVLANEQVVNGGCDRCDSSVGKKNLNQW------YFKITDYAEALL 201



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 27/239 (11%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKIS 304
           A +W P D ++ G +    H +Y   F      L   + P P KK+ + G +L  G K+S
Sbjct: 523 ANYWVPVDQYIGGVEHAILHLLYSRFFTKVMKDLGLTDQPEPFKKLLTQGMVLKDGAKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P E+I++ G D  R F++      +D  +   G++            N V R
Sbjct: 583 KSKGNVVSPEEIIQKYGADTARLFVLFAAPPERDLEWSDQGVEGSYR------FLNRVWR 636

Query: 365 SVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVS 422
                + +   M  + G A T+ D+ +       ++++  +++++   + A++ V+ L++
Sbjct: 637 LAEEFIDNNLFMSTSLGEALTKRDKDLKYTIHYTIKKVTSDVEDRFNFNTAISAVMELIN 696

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ +Y         K+T+P + +  L+   E I    +LL  F P    ++++ L  A+
Sbjct: 697 ELYKY---------KETDPSKLNGDLF--REGIETSILLLAPFAPHFTEELWEKLGKAE 744


>gi|33241293|ref|NP_876235.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|81663879|sp|Q7V9I9|SYV_PROMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33238823|gb|AAQ00888.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 933

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/383 (21%), Positives = 154/383 (40%), Gaps = 71/383 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F R+    ++  S+         P +R  +V     +G++D  +SR+ + 
Sbjct: 369 PIEPLLSTQWFVRMEPMAERCRSHLGKDEPRFYP-DRWAKVYRDWLTGIRDWCISRQLW- 426

Query: 216 WGIKIP-------------DDPQYIMYV----------------------------WIDA 234
           WG +IP             DD  YI+ +                            W  +
Sbjct: 427 WGHRIPAWFVVSETNNELTDDTPYIVALSEKDALLEAQKKYGTDAVLRQDEDVLDTWFSS 486

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +   ++++P +  V G DI+ F    +   A   +  +P    V+ 
Sbjct: 487 GLWPFSTLGWPDKTNADLSRWYPTNTLVTGFDIIFFWVARMTMMAGAFTGKMPF-ADVYI 545

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
           HG +   +  K+SKS GN IDP+ +I+  G DALR+ LV+E+A  G+D   D D  K   
Sbjct: 546 HGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVKEVAGAGQDIRIDYDRAKDTS 605

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDESILSVCSRVLQEI 401
              + A    N +  +    L +  G       F E        SD+ ILS  S+V  E 
Sbjct: 606 ATVEAARNFANKLWNATRFALINL-GDTTFKETFDELEHNRLELSDQWILSKLSKVNNET 664

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFD--------AQKPWELKKTNPDRASTVLYVT 451
            +  +   +  A   +         D Y +         + P E   +N  ++  V++  
Sbjct: 665 AKRYKKYALGEAAKGLYEFAWNDFCDWYLELIKRRLNLGESPSEADLSNRKKSQIVMF-- 722

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            +V+R+L +++   +P L  +++
Sbjct: 723 -KVLRELLVMMHPLMPHLTEELW 744



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 52 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 96


>gi|304407500|ref|ZP_07389152.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343451|gb|EFM09293.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 886

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 7/148 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +F+P DL V G DI+ F    + + A   +  +
Sbjct: 454 VLDTWFSSALWPFSTLGWPDEDHEDFKRFYPTDLLVTGYDIIYFWVARMIFTALEFTDQI 513

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +     +K+SKSLGN IDP++VIE+ G DA+R+ L      G+D  +  
Sbjct: 514 PF-KDVLMHGLVRDENNQKMSKSLGNGIDPLDVIEKYGADAMRFMLSTNNTPGQDLRFRW 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILK 371
           + +++  N   AN I N  SR   M L+
Sbjct: 573 EKVEQARN--FANKIWN-ASRFALMNLE 597



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D++ R  R+ G D L+  G+D  G     K+ +  +  G++        
Sbjct: 58  HIGHALDFTLQDIMTRTKRMQGFDALWLPGSDHAGIATQTKVEQKLREQGLSRYDLGREK 117

Query: 69  --TKVFVDQNSRN------FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              KV+  + + N      +  M   LD S + F  T ++      R ++ K+ +KG IY
Sbjct: 118 FLEKVWEWKETYNNTIREQWAKMGFGLDYSRERF--TLDEGLSRAVRQVFVKLYEKGLIY 175

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +G     W      A  + +  YK  +G  Y+ Q+
Sbjct: 176 RGKKIINWDPAARTALSDIEVEYKEVNGNLYHLQY 210


>gi|295706762|ref|YP_003599837.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804421|gb|ADF41487.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 880

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 44/270 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK +   +   +     +R  +        ++D  +SR+ + WG +IP   
Sbjct: 364 WFVKMQPLADKAVDLQKQEEKVNFVPDRFEKTYLHWMENIRDWCISRQLW-WGHRIPAWY 422

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               +    ++  W  +     +T G+ D       +++P ++ 
Sbjct: 423 HKETGEVYVDHETPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFKRYYPTNVL 482

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++   L    K     V  HG +   +G K+SKSLGN +DP+E
Sbjct: 483 VTGYDIIFF----WVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGVDPME 538

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VIE+ G D+LRYFL    + G+D  +  + ++   N   AN I N    +    L + DG
Sbjct: 539 VIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN--FANKIWN----ASRFALMNMDG 592

Query: 376 M----IPTPGAFTESDESILSVCSRVLQEI 401
           +    +   G  + +D+ IL+  +  ++ +
Sbjct: 593 ITFEELDLSGGKSVADKWILTRLNETIEHV 622



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 21/171 (12%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G    AK 
Sbjct: 38  EKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
            +      K   D    NF          Y  FIR                 T ++    
Sbjct: 98  EEKLRSEGKSRYDLGRENFVAETWKWKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++  +  KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 158 AVREVFVTLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMRY 208


>gi|152983469|ref|YP_001346507.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166231631|sp|A6V0C2|SYL_PSEA7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150958627|gb|ABR80652.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 873

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     
Sbjct: 29  LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +   D L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGV 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           IY+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++
Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201

Query: 176 LLSYYESHP 184
           LL   ++ P
Sbjct: 202 LLESLDNLP 210


>gi|317484769|ref|ZP_07943668.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923976|gb|EFV45163.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 836

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++K Y+     YP+   H+GH     I DV+ARF R+ G +V+   G D  G     A
Sbjct: 32  KDKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKRMQGFNVMHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   V+   N  N R     L  SY  D  + T ++ ++   ++ + +  +KG +
Sbjct: 92  AIKHNIHPSVWTHANIDNMRAQLKRLGYSYDWDREVATCDEPYYRWEQLFFLRWLEKGLV 151

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-- 176
           Y K     W    +    N+  V    DG  +     PV   E   +F +++ Y D+L  
Sbjct: 152 YRKKASQNWCPHCNTVLANEQVV----DGLCWRCD-TPVVQKELTQWFLKITDYADELLA 206

Query: 177 -LSYYESH-PEFILPIER 192
            LS  ES  P+ +L ++R
Sbjct: 207 DLSKLESGWPDRVLSMQR 224



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN +DP E+I + G D +R F +
Sbjct: 576 LLTQGMVLKDGSKMSKSKGNTVDPTEMIAKYGADTVRLFCL 616


>gi|255527336|ref|ZP_05394214.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184931|ref|ZP_06853342.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508983|gb|EET85345.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050713|gb|EFG90136.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 882

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 19/235 (8%)

Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P    V G DI+ F    + +     + ++P  + V  HG +   +G K+SKSLGN +
Sbjct: 478 FYPNSTLVTGYDIIFFWVARMVFSGLYCADDIPF-ENVLIHGIVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+ L+   A G D  Y  + ++   N   AN I N  SR V M L 
Sbjct: 537 DPLDVIDQYGADALRFTLITGNAPGNDIRYYPERVESSRN--FANKIWN-ASRFVLMNL- 592

Query: 372 DYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
             DG I         ++ +D+ ILS  + +++E+ +N++   +  A  +V   +     D
Sbjct: 593 --DGEIMNKYKDCKNYSSADKWILSRMNTLIKEVTDNIEKFELGIAAQKVYDFIWGEFCD 650

Query: 426 RYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            Y +  KP  +   + + A  V + V   V+     LL   +P +  +I+  L+ 
Sbjct: 651 WYIELVKP--VMYGDDEEAKGVAFNVLNNVLSTSLQLLHPIMPFITEEIYTHLYT 703


>gi|227542948|ref|ZP_03972997.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181170|gb|EEI62142.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 886

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 62/312 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 418 MHDWTISRQLW-WGHRIPIWYGPNDEVVCCGPDDTPPEGYTQDPD-VLDTWFSSALFPFS 475

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------------ANLPLPK 288
           T G+ D+ D  K KF+P  + V   DIL     +W A ++               +P   
Sbjct: 476 TMGWPDSTDDLK-KFYPTSVLVTAYDIL----FFWVARMMMFGTYAGQMTEGLGEVPF-T 529

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +F HG +   +G K+SKSLGN I+P++ +E+ G DALR+ L R    G D     D   
Sbjct: 530 DLFLHGLVRDERGRKMSKSLGNGINPMDWVEDYGADALRFALARGANPGVDLPLGSDA-- 587

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
               +   N +  L + +   + +  D     P   +++D  IL   + V +++ E + +
Sbjct: 588 ---GSSARNFVTKLFNAARFALSRGADASAELPAELSDADRWILDRLNEVTRDVNELLDD 644

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               +A  ++   V      +D    W  EL KTN   A     V   V+ Q+  LL   
Sbjct: 645 YQFAKANEEMFHFV------WDELCDWYLELSKTNFQPA-----VMGHVLDQVLRLLHPT 693

Query: 466 VPKLANKIFDIL 477
           +P +   ++  L
Sbjct: 694 MPFVTETLWTAL 705


>gi|218889730|ref|YP_002438594.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226695264|sp|B7V9C9|SYL_PSEA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218769953|emb|CAW25715.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 873

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     
Sbjct: 29  LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +   D L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           IY+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++
Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201

Query: 176 LLSYYESHP 184
           LL   ++ P
Sbjct: 202 LLESLDNLP 210


>gi|15599182|ref|NP_252676.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107103505|ref|ZP_01367423.1| hypothetical protein PaerPA_01004575 [Pseudomonas aeruginosa PACS2]
 gi|254236880|ref|ZP_04930203.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242673|ref|ZP_04935995.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|14285775|sp|Q9HX33|SYL_PSEAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|9950178|gb|AAG07374.1|AE004816_10 leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126168811|gb|EAZ54322.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126196051|gb|EAZ60114.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 873

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     
Sbjct: 29  LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +   D L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           IY+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++
Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201

Query: 176 LLSYYESHP 184
           LL   ++ P
Sbjct: 202 LLESLDNLP 210


>gi|90101542|sp|Q7TUI9|SYV_PROMM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 929

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 32/289 (11%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           +R  F   + I  D + ++  W  +     +T G+ D        ++P    V G DI+ 
Sbjct: 464 ARDQFGEAVVIQQD-EDVLDTWFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIF 522

Query: 270 FHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           F    +   A   +  +P    V+ HG +   +  K+SKS GN IDP+ +IE  G DALR
Sbjct: 523 FWVARMTMMAGAFTGRMPF-ADVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALR 581

Query: 327 YFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           + LVRE+A  G+D   D D         + A    N +  +    L +  G   TP +  
Sbjct: 582 FALVREVAGAGQDIRLDYDRKSDTSATVEAARNFANKLWNATRFALMNLGG--ETPASLG 639

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHR----ALAQVISLVSE------VDRYFDAQKPW 434
           E D + L +  R +      M   ++ R     L +    + E       D Y +  K  
Sbjct: 640 EPDPASLQLADRWILSRLARMNRDVVERYDSYRLGEAAKCLYEFAWNDICDWYLELSK-- 697

Query: 435 ELKKTNP--DRASTVL-------YVTVEVIRQLAILLQAFVPKLANKIF 474
             ++ +P  D +  VL        V  +V+  L ++L   +P L+ +++
Sbjct: 698 --RRLHPGEDASGEVLADQCTARQVLAKVLADLLVMLHPLMPHLSEELW 744



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          S  I  PN     H+GHA+   + D + RF RL G +VL   GTD
Sbjct: 53 SVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTD 97


>gi|90424069|ref|YP_532439.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106083|gb|ABD88120.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 952

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D+ D    +++P ++ V G DI+ F    W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDD-DTDCKRYYPTNVLVTGFDIIFF----WVARMMMMGLHF 549

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P P  V+ H  +   KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D 
Sbjct: 550 MDDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDI 608

Query: 340 FYDKDGLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                 ++   N   A  + N       +   +  D+D   PT    T  +  I     R
Sbjct: 609 KLASSRVEGYRN--FATKLWNSSRFAEMNACALPADFD---PTAAKQT-LNRWIAHETVR 662

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLYVT 451
            ++E+ E ++    + A       V  V  D Y +  KP  L + +P +A T   V +  
Sbjct: 663 AVREVTEAIEAYRFNDAAGAAYRFVWNVYCDWYLELAKPVLLGEDSPAKAETRAMVAWAR 722

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
            E+++    LL  F+P +  +++ +
Sbjct: 723 DEILK----LLHPFMPFITEELWAV 743



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 105/270 (38%), Gaps = 48/270 (17%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + R+ +  S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD       
Sbjct: 31  ERRDAIPFSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD------- 83

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
               +AG+ T++ V++     R      D+  + F+    +   ++  ++  ++      
Sbjct: 84  ----HAGIATQMVVERQLME-RQEPSRRDMGREKFLERVWQWKAESGGVIVNQLK----- 133

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
             G    W   R    +  DE    A  + +   H        +G       Y+DK L  
Sbjct: 134 RLGASCDWSRER----FTMDEGLSRAVAKVFVELHR-------QGLI-----YKDKRLVN 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-PDDPQYIMYVWIDALTNY 238
           ++  P+ +  I         VK  L  L   R   D G++  PDDP+  + V        
Sbjct: 178 WD--PKLLTAISDLEVQQVEVKGNLWHL---RYPLD-GVEFNPDDPETFIVVATTRPETM 231

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           L  T    NPD  +        HV+G++++
Sbjct: 232 LGDTAVAVNPDDVRYS------HVVGRNVI 255


>gi|171693671|ref|XP_001911760.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946784|emb|CAP73588.1| unnamed protein product [Podospora anserina S mat+]
          Length = 948

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 23/202 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GH     IADV+ARFH L G DVL   G D  G     AA  
Sbjct: 75  EKKYVLPMFPYPSGYLHLGHLRVYTIADVVARFHSLRGHDVLLPMGWDAFGLPAENAAIE 134

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    +   N    ++  DV++ S+D        R   TC   + K + K  I+    
Sbjct: 135 RGIDPATWTKSNIAKMKEQLDVMNGSWD------WSRELATCDPSFYKHTQK--IFLLLR 186

Query: 125 SGWYSLRDEAYYNDDEVYKG--------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
               + +DEA  N D V K         A+G  + +    V+  + + +F R+S ++D L
Sbjct: 187 EQGLAYQDEAEVNYDPVDKTVLANEQVDANGCSWRSGAK-VEKRKLKQWFLRISQFRDSL 245

Query: 177 LSYYE------SHPEFILPIER 192
           L   E      + PE +L +++
Sbjct: 246 LQDLEILSKDNNWPERVLTMQK 267


>gi|296387484|ref|ZP_06876959.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 873

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     
Sbjct: 29  LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +   D L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           IY+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++
Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201

Query: 176 LLSYYESHP 184
           LL   ++ P
Sbjct: 202 LLESLDNLP 210


>gi|229822567|ref|YP_002884093.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229568480|gb|ACQ82331.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 846

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y+ T   YP+   H+GH     +ADVLAR+ R+ G DVLF  G D  G     AA  
Sbjct: 43  ERRYLVTMFPYPSGDLHMGHGEVFALADVLARYWRMRGYDVLFPIGWDSFGLPAENAAIR 102

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIYKG 122
            G +  V+   N            +S+D   R  T++   +   + ++ ++ ++G  Y+ 
Sbjct: 103 RGESPAVYTSDNIATQAASIRRYGVSFDWTRRFHTSDPEFYRWNQWIFLRMVEQGLAYRA 162

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
             S  +  +D     +++V  G   +      + + VQW      FFR++ Y D+LL
Sbjct: 163 ASSVNWCPQDGTVLANEQVVSGRCERCGTPVVRRDLVQW------FFRITDYADRLL 213


>gi|75675628|ref|YP_318049.1| valyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|90101537|sp|Q3SSP4|SYV_NITWN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|74420498|gb|ABA04697.1| valyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 952

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 35/267 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     + +++P ++ V G DI+     +W A ++   +  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDETPEVR-RYYPTNVLVTGFDII----FFWVARMMMMGIHF 549

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+     V+ H  +   KG K+SKS GNVIDP+ ++++ G DALR+ L      G+D  
Sbjct: 550 MKEAPFSTVYIHALVRDEKGAKMSKSKGNVIDPLNLVDKYGADALRFTLAAMAVQGRD-- 607

Query: 341 YDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPT---PGAFTES-DESILSVC 394
                   +++     G  N  ++  +     +  D ++P    P A TE+ +  I+   
Sbjct: 608 -------IKLSPQRVEGYRNFATKFWNACRFAEMNDCVVPARFDPTAATETLNRWIVHET 660

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLY 449
           +R   E+ E +++   + A + +   V  V  D Y +  KP  L + +P ++ T   V +
Sbjct: 661 ARTACEVTEAIESSRFNDAASAIYRFVWNVYCDWYLELAKPVILGEDSPAKSETRAMVAW 720

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
              E+++    LL  F+P +  +++ +
Sbjct: 721 ARDEILK----LLHPFMPFITEELWAV 743



 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 13/77 (16%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          + RE    +  I  PN     H+GHA    + DVL RF R+ G DVL+  GTD       
Sbjct: 31 ERREAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTD------- 83

Query: 60 KAAQNAGVTTKVFVDQN 76
              +AG+ T++ V++ 
Sbjct: 84 ----HAGIATQMVVERQ 96


>gi|313109428|ref|ZP_07795388.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310881890|gb|EFQ40484.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 887

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     
Sbjct: 29  LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +   D L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           IY+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++
Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201

Query: 176 LLSYYESHP 184
           LL   ++ P
Sbjct: 202 LLESLDNLP 210


>gi|189485331|ref|YP_001956272.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287290|dbj|BAG13811.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 818

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 23/201 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y    + YP+   H+GH     I DV ARFH++ G +VL   G D  G      A+
Sbjct: 31  KEKYYCLVMLPYPSGNLHMGHVRNYSIGDVFARFHKMTGKNVLHPMGWDAFGL----PAE 86

Query: 64  NAGVTTKV----FVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDK 116
           NA +  K+    +  QN  + R+   VL ISYD   +F   T + ++   +  + K+ ++
Sbjct: 87  NAAIKNKIHPAKWTKQNIAHMREQLKVLGISYDWNREFATCTPE-YYRWNQWFFIKMWER 145

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY--YNAQHNPVQWMEEEGYFFRLSAYQD 174
           G I++   +  +         +++V KG   +   +  Q +  QW      F +++ Y D
Sbjct: 146 GLIFRKSANVNWCPSCNTVLANEQVSKGLCWRCDSHTQQRDLEQW------FIKITDYAD 199

Query: 175 KLLSYYE---SHPEFILPIER 192
           +LL  ++     PE +L +++
Sbjct: 200 ELLEGHKQLCGWPEQVLSMQK 220



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 42/242 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK 299
           D +K  +W P + +V G +    H IY   W   +    +     P  + + + G +   
Sbjct: 521 DSAKVNYWMPVNQYVGGIEHACMHLIYSRFWYKVMRDLGIVKHGEPF-ENLLTQGMVTLS 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G  +SKS GN++ P E+IE+ G D  R F +      K   +  +G++         G  
Sbjct: 580 GSVMSKSKGNIVSPDEIIEKYGADTARLFTLFAAPPQKQLDWSMEGVE---------GCW 630

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF--TESDES-ILSVCSRVLQEIRENMQNQL-IHRALA 415
             ++R    I + +D ++ T   F  TE D++ IL +  R ++++  +++ +   + A++
Sbjct: 631 RFINR----IWRLFD-IVHTKTEFSATEKDKNDILRIMHRTIKKVTVDIEKEFQFNTAIS 685

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ LV+ +  Y           +N D  S  +Y TV       +L+  F P L  +I+D
Sbjct: 686 SVMELVNALYTY--------KYHSNDDGISAEVYKTV------ILLMTPFTPHLCEEIWD 731

Query: 476 IL 477
            L
Sbjct: 732 RL 733


>gi|148255338|ref|YP_001239923.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407511|gb|ABQ36017.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 955

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 37/267 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D+    K +++P ++ V G DI+     +W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDDTPEVK-RYYPTNVLVTGFDII----FFWVARMMMMGLHF 549

Query: 287 PKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338
            K+V     + H  +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D  
Sbjct: 550 MKEVPFSTVYIHALVRDEKGAKMSKSKGNVIDPLALIDEHGADALRFTLAAMAAQGRDIK 609

Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTES-DESILSV 393
                 DG +K      AN + N  SR   M        +P    P +  E+ +  I   
Sbjct: 610 LSTQRVDGYRK-----FANKLWN-ASRFAEM----NGCTVPVGFDPASAKETLNRWIAHE 659

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VL 448
            +   +E+ E ++    + A   +   V +V  D Y +  KP  L + +P +A T   V 
Sbjct: 660 AAAATREVTEALEAYRFNDAANAIYRFVWDVYCDWYVELAKPTLLGEDSPAKAETRAMVA 719

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   E+++    LL  F+P +   +++
Sbjct: 720 WARDEILK----LLHPFMPFITEALWE 742



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + D+L RF R+ G DVL+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGIATQMVVERQ 96


>gi|302880066|ref|YP_003848630.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582855|gb|ADL56866.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 893

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH     I DVL+R+HR+ G +V+   G D  G     AA
Sbjct: 31  DKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMKGFNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           Q   V    +   N    R     L +  D    + T    ++   + L+ ++ +KG IY
Sbjct: 91  QAHNVPPAAWTYDNINYMRRQLQSLGLGIDWSREVTTCTPEYYRWEQWLFTRLFEKGIIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   S  +   D     +++V    DG+ + +    V+  E   YFFR++ Y D+LL+
Sbjct: 151 KKTSSVNWDPVDHTVLANEQVI---DGRGWRSGAL-VEKREIPMYFFRITQYADELLN 204


>gi|148643401|ref|YP_001273914.1| isoleucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552418|gb|ABQ87546.1| isoleucyl-tRNA synthetase, IleS [Methanobrevibacter smithii ATCC
           35061]
          Length = 1090

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 21/276 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    ++ VWID+      +  Y    +     F P D    G D  R  F++    
Sbjct: 552 RIPD----VLDVWIDSGVAGWASLYYPQQQEKFNQWF-PYDFITEGHDQTRGWFYSQLGT 606

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +    +P  KKV  HGF+L + G+K+SKSLGNV+ P EVIE+ G D LR++L+     
Sbjct: 607 GVISMGQVPY-KKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLWASKP 665

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--ILS 392
             D  +  D L   VN  + N + N+ V  +  M L +++    T       DE   I+S
Sbjct: 666 WDDLKFVWDEL-LNVNK-MFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDEDNWIMS 723

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVL 448
             + +++E+ E+++    H+A  ++ + + E + R++      + W ++  +PD+     
Sbjct: 724 RANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTW-VESDDPDKLGA-Y 781

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DEN 483
           Y     I +L  +L    P +  +I++ L    DEN
Sbjct: 782 YSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDEN 817


>gi|258511798|ref|YP_003185232.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478524|gb|ACV58843.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 881

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 161/390 (41%), Gaps = 57/390 (14%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +LR+E Y   +E    A G + +     V+    E +F R+       L          L
Sbjct: 327 ALREEGYLVKEEPLDHAVG-HCDRCGTVVEPYLSEQWFVRMEPLARDALERARRGELQFL 385

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYV---- 230
           P  R  +V     + ++D  +SR+ + WG +IP              DD  + ++     
Sbjct: 386 P-GRFMKVFEQWLTNVRDWCISRQLW-WGHRIPAWYCASCGQVSVSRDDLDHCLHCGSAD 443

Query: 231 ----------WIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                     W  +     +T G+ ++ PD   A+F+P  L V G DIL     +W A +
Sbjct: 444 VKQDEDVLDTWFSSALWPFSTMGWPEHTPD--LARFYPTSLLVTGYDIL----FFWVARM 497

Query: 280 L------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +      +  +P  + V  HG +   KG+K+SKS GN IDP++VI++ G DALR+ L   
Sbjct: 498 VFMGVHFTGKMPF-QTVLLHGLLRDAKGQKMSKSKGNGIDPMDVIDKYGADALRFMLASN 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDES 389
              G D  +  + ++   N    N + N  +R V M ++  DG  P P    +   +D  
Sbjct: 557 TVLGNDLRFSWEKVEGARN--FLNKLWN-AARFVLMNVE--DGFSPQPLEAQSLDLADRF 611

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           IL      ++ +   ++   +  A   V     +   D Y +  K   L     ++    
Sbjct: 612 ILHRLGETIRRVTSALEEYDVGEAARAVYEFTWDEFCDWYIEFAKI-NLYGDREEKKRQT 670

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V + V+ ++  LL  ++P +  +I+  L
Sbjct: 671 QSVLLTVLSRVLALLHPYIPFVTEEIWQAL 700



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79
           H+GHA +  + D+  RF R+ G   L+  GTD           +AG+ T+  V+Q  R 
Sbjct: 53  HLGHALDTTLQDIATRFRRMQGYSTLWVPGTD-----------HAGIATQARVEQALRE 100


>gi|110668577|ref|YP_658388.1| isoleucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121692201|sp|Q18GW3|SYI_HALWD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|109626324|emb|CAJ52782.1| isoleucine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 1059

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 34/273 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP 276
           ++PD    +  VWID+    + + G +D P  + A  + WPAD  V   D  R    +W 
Sbjct: 526 RVPD----VFDVWIDS---SVASWGTIDYPGETDAYDELWPADFIVEAHDQTR--GWFWS 576

Query: 277 AFLL--SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              +  +A   +P ++V  HGF     G K+SKS GN++ P E I+  G D LR +L+  
Sbjct: 577 QLGMGTAATGQVPYEEVMMHGFANDENGRKMSKSRGNIVTPEEAIDRAGRDPLRAYLLSH 636

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----D 387
              G D  ++ DGL +  +    N   N+    +  +  D DG  P     +E      D
Sbjct: 637 DQQGVDLSFEWDGLGEMQST--LNIFWNVFRFPLPYM--DLDGYDPATADLSEGSMNIVD 692

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDA---QKPWELKKTNPDR 443
           E +LS    V    R   +   I  A+  ++  ++ +V R++     ++ W  + +   R
Sbjct: 693 EWVLSRLQSVKATTRAAWEEYEIDTAVNTILEFITDDVSRFYIKAIRERMWADEDSASKR 752

Query: 444 ASTVLYVTV--EVIRQLAILLQAFVPKLANKIF 474
            +     TV  E IR    LL    P L  +++
Sbjct: 753 GAYATLSTVLDETIR----LLAPIAPYLTEQMY 781


>gi|160902902|ref|YP_001568483.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083631|sp|A9BIJ7|SYV_PETMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|160360546|gb|ABX32160.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 874

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 24/273 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  K K++P DL V G DI+ F    W A ++      
Sbjct: 446 VLDTWFSSALWPFSTLGWPEETEDLK-KYYPTDLLVTGFDIIFF----WVARMIMMGEKF 500

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +   H   LH+      G K+SKSLGN +DP+EVI E G D +R+ L    A G+D  
Sbjct: 501 MGEKPFHDVYLHQLVRDKYGRKMSKSLGNGVDPLEVINEYGTDPVRFTLSVLAAQGRDIK 560

Query: 341 YDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            D    D  +K      AN I N  +R V + ++DY+  +         D+ IL+  +  
Sbjct: 561 LDVGSFDAYRK-----FANKIWN-AARFVLLNMEDYEKTVLKDEDLKIEDKWILTRLNST 614

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + EI ++++     +A  ++         D Y +A K   L     D+   V  V ++V 
Sbjct: 615 ILEISKDLEVYNYDQAARKLYDFFWNELCDWYIEASKN-RLNSIGKDKL-VVQNVILQVF 672

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                LL  F+P ++ +++  L +  ++    S
Sbjct: 673 DSSLRLLHPFMPYISEELWQKLPIEKDSELLIS 705


>gi|116052026|ref|YP_789131.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122261173|sp|Q02SF5|SYL_PSEAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115587247|gb|ABJ13262.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 873

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     
Sbjct: 29  LPDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +   D L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAMKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGV 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           IY+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++
Sbjct: 149 IYRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEE 201

Query: 176 LLSYYESHP 184
           LL   ++ P
Sbjct: 202 LLESLDNLP 210


>gi|330832310|ref|YP_004401135.1| valyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306533|gb|AEB80949.1| valyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 883

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   + + 
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGSQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             GVT           KV  + D+ +   R+    L +S  D+ R   T ++      R 
Sbjct: 100 EQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSL-DYQRDRFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|70726264|ref|YP_253178.1| valyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|90108438|sp|Q4L703|SYV_STAHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68446988|dbj|BAE04572.1| valine-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 876

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPNIDADDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VIEE G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIEEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I  ++    I   G  + +D+ IL+  +  ++
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGDEFKFEDIDLTGNLSLADKWILTRLNETIE 616

Query: 400 EI---RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +    E  +   + RAL   I      D Y +  K   +   +  +  T   V    + 
Sbjct: 617 TVTNLSEKYEFGEVGRALYNFI-WDEFCDWYIEMSKI-PMNGEDEAQKQTTRSVLSYTLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  +L  F+P +  KI+  L
Sbjct: 675 QIMRMLHPFMPFVTEKIWQSL 695



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 13/75 (17%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D       
Sbjct: 30 EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMD------- 82

Query: 60 KAAQNAGVTTKVFVD 74
              +AG+ T+  VD
Sbjct: 83 ----HAGIATQAKVD 93


>gi|223932581|ref|ZP_03624581.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898691|gb|EEF65052.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 883

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   + + 
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGSQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             GVT           KV  + D+ +   R+    L +S  D+ R   T ++      R 
Sbjct: 100 EQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSL-DYQRDRFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|167465172|ref|ZP_02330261.1| valyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 853

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 14/154 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D  K +++P ++ V G DI+ F    W A ++ ++L  
Sbjct: 422 VLDTWFSSALWPFSTLGWPEQTDDLK-RYFPTNVLVTGYDIIYF----WVARMIFSSLEF 476

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN IDP+EVI++ G DA+RY L      G+D  
Sbjct: 477 TGQIPFKDVLVHGLVRDAEGRKMSKSLGNGIDPLEVIKQYGADAMRYMLSTSSTPGQDLR 536

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +  + +++  N   AN I N  SR   M L+ ++
Sbjct: 537 FRWERVEQARN--FANKIWN-ASRFALMNLEGFN 567



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 23/173 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           ERE   I           HIGHA +  + D++ R  R+ G D L+  G+D  G     K+
Sbjct: 7   EREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGSDHAGIATQTKV 66

Query: 59  AKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  GV+                 +++       +  M   LD S + F  T ++  
Sbjct: 67  EQKLREEGVSRYDLGREAFLEKVWDWKELYAGTIREQWGKMGLSLDFSRERF--TLDEGL 124

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
               R ++ K+ DKG IY+G Y   +        +D EV YK   G  Y+ ++
Sbjct: 125 SKAVRKVFVKLYDKGLIYRGKYIINWDPAARTALSDIEVEYKEIQGNLYHLEY 177


>gi|217969623|ref|YP_002354857.1| leucyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506950|gb|ACK53961.1| leucyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 875

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 10/187 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  +   YP+ + H+GH     I DVLARFHR+ G +VL   G D  G     AA 
Sbjct: 32  RPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMKGYNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V     T   +D      + +   +D S +  + T    ++   + L+ ++ +KG I
Sbjct: 92  QNNVPPAKWTYANIDYMKAQLKRLGFAIDWSRE--LATCTPEYYRWEQWLFTRLYEKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V    DG+ + +    V+  E   Y+ +++AY D+LLS 
Sbjct: 150 YKRLGTVNWDPVDETVLANEQVI---DGRGWRSGAL-VEKREIPMYYMKITAYADELLSA 205

Query: 180 YESHPEF 186
            +  P++
Sbjct: 206 LDDLPDW 212


>gi|84686162|ref|ZP_01014057.1| valyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665689|gb|EAQ12164.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 1030

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 19/129 (14%)

Query: 223 DPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAI 273
           DP  ++Y VW D        ++ L   G L  P+ +   AK++P D+ V G DIL F   
Sbjct: 586 DPSKLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEETPELAKYFPTDVLVTGFDILFF--- 642

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            W A ++   L + +K   H   LH      KG+K+SK+ GNVIDP+E+I+E G DALR+
Sbjct: 643 -WVARMMMMQLAVVEKEPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIIDEYGADALRF 701

Query: 328 FLVREIACG 336
                 A G
Sbjct: 702 TNASMAAVG 710



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA+   + D+L R+HR+ G D L+  G D  G
Sbjct: 52 HVGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAG 86


>gi|262276791|ref|ZP_06054584.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
 gi|262223894|gb|EEY74353.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
          Length = 918

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +   T T  L+N    K   WPAD+++ G D  R  FH+    +     N 
Sbjct: 526 IVEVWFDSGS---THTYVLENRQDLK---WPADMYLEGSDQHRGWFHSSLLHSVGTRGNA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + +HGF++  KG+K+SKSLGNV+ P E+I++ GVD LR ++V
Sbjct: 580 PY-KSILTHGFVVDGKGQKMSKSLGNVVAPEEIIKKNGVDILRLWVV 625



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           RE+  +     Y N   HIG A   I+ D++ +F  +DG D  +  G D HG  I
Sbjct: 46  REQFILHDGPPYANGNIHIGTALNKILKDIVIKFKSIDGKDCPYIPGWDCHGLPI 100


>gi|222445643|ref|ZP_03608158.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435208|gb|EEE42373.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii
           DSM 2375]
          Length = 1090

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 21/276 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    ++ VWID+      +  Y    +     F P D    G D  R  F++    
Sbjct: 552 RIPD----VLDVWIDSGVAGWASLYYPQQQEKFNQWF-PYDFITEGHDQTRGWFYSQLGT 606

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +    +P  KKV  HGF+L + G+K+SKSLGNV+ P EVIE+ G D LR++L+     
Sbjct: 607 GVISMGQVPY-KKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLWASKP 665

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--ILS 392
             D  +  D L   VN  + N + N+ V  +  M L +++    T       DE   I+S
Sbjct: 666 WDDLKFVWDEL-LNVNK-MFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDEDNWIIS 723

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVL 448
             + +++E+ E+++    H+A  ++ + + E + R++      + W ++  +PD+     
Sbjct: 724 RANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTW-VESDDPDKLGA-Y 781

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DEN 483
           Y     I +L  +L    P +  +I++ L    DEN
Sbjct: 782 YSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDEN 817


>gi|85374704|ref|YP_458766.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787787|gb|ABC63969.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 836

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 30/211 (14%)

Query: 244 YLDNPDG------SKAKFW-PADLHVIGKDILRFHAIYWP-------AFLLSANLPLPKK 289
           YLD  +G      S+A+ W P D +V G +    H IY+        A  ++      K 
Sbjct: 522 YLDAKNGEQAFRESRAEDWMPIDYYVGGLEHASQHLIYFRFISHFLHAIGMTPTSEPVKN 581

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--K 347
              +G +   GEK+SKS GNV+ P E +++ G DALR +++ +    +D  +D  G+  K
Sbjct: 582 FLDNGLVKLGGEKMSKSKGNVVIPTEAVDKYGADALRLYILADTPLRRDIDWDDSGIEGK 641

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +R  + +    G + S          +G  P PG  T+++++ +   +++ +E+ E+++ 
Sbjct: 642 QRFLSQIWTLAGQIASAPA------LEGE-PAPG--TDAEKAAMRELAKIAKEVAEDLEE 692

Query: 408 QL-IHRALAQVISLVSE----VDRYFDAQKP 433
           +   H A+A++ S V E    V    DA+KP
Sbjct: 693 RRGFHNAIARLHSFVGELRPLVAGASDAEKP 723



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 19/184 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I+D +AR  R  G + L   G D  G      
Sbjct: 45  SDKPKRYVLGMFPYPSGNAHMGHVRVYAISDAVARLSRFRGFETLHPLGWDAFGLP---- 100

Query: 62  AQNAGVTTKV-FVDQNSRNFRDMADV------LDISYDDFIRTTEKRHHDTCRILWKKIS 114
           A+NA +       +   RN   M D       L    D  I +     +   + L++ + 
Sbjct: 101 AENAAIQNNADPAEWTQRNIATMKDEQFSRLGLSFDLDQEINSASPEFYKWTQWLFQTLY 160

Query: 115 DKGDIYKGCYSGW--YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           D   +Y+   +GW  +   D+    +++V    DG+ + +   PV+  +   ++ R++ +
Sbjct: 161 DHDLVYRA--NGWVNWDPVDQTVLANEQVI---DGKGWRSG-APVERRQLPQWYVRITRF 214

Query: 173 QDKL 176
              L
Sbjct: 215 AQSL 218


>gi|193212076|ref|YP_001998029.1| valyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085553|gb|ACF10829.1| valyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 902

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 32/271 (11%)

Query: 227 IMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +    LTT G+  L + +     F+P D  V G DI+ F    W A ++ A L
Sbjct: 457 VLDTWFSSWLWPLTTLGWTGLHSDNDDLRAFYPTDTLVTGPDIIFF----WVARMIMAGL 512

Query: 285 ------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P     F+      KG K+SKSLGN  DP++VI+  G DALR+ +V     G+D
Sbjct: 513 HFKGDVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQD 572

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTESDESILSVC 394
             + ++  K  +  + A  I N  SR V M    +    +  +     FT   E + S  
Sbjct: 573 VLFGEE--KCELGRNFATKIWN-ASRFVFMQREKLFATSEEFVDAFTNFTPQRELMSSAG 629

Query: 395 SRVLQEIRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTNPDR 443
             ++   R N   +  H+A+A      ++ +V E       D Y +A K     +T+ +R
Sbjct: 630 LWLMS--RYNAMLERYHQAMANFKVNDMVKIVHEFFWGDYCDWYVEALKSELAGETSEER 687

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               + + V V+  +   L   +P + ++I+
Sbjct: 688 GRHAVCLAVSVLEGVLKALHPVMPFITDEIW 718


>gi|253581500|ref|ZP_04858725.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836570|gb|EES65105.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 886

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P    V G DI+ F       F L    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELETFYPTSTLVTGADIIFFWVARMIMFGLYEMK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P K VF HG +  + G K+SKSLGN  DP+ +I+E G DA+R+ ++   + G+D  + 
Sbjct: 509 EIPFKDVFFHGIVRDEIGRKMSKSLGNSPDPLNLIDEFGADAIRFSMIYNTSQGQDVHFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +  L+  +  + AN I N V+R V M L+ +D
Sbjct: 569 EKLLE--MGRNFANKIWN-VARFVIMNLEGFD 597


>gi|328951485|ref|YP_004368820.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451809|gb|AEB12710.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 875

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E EK Y+     YP+   H+GH     + DVLARF +  G  VL   G D  G     A
Sbjct: 27  EEGEKQYVLMMFPYPSGDLHMGHLKNYTMGDVLARFKKQQGYTVLHPMGWDAFGLPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N  + ++   ++ I Y  D  + T    ++   + ++ K+ +KG +
Sbjct: 87  ALKFGVHPAEWTFKNIASAKESLRLMGILYDWDREVTTCTPEYYRWNQWIFLKMYEKGLV 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + +    +++V    DG+ +  +   V+  E E ++ R++AY D+LL  
Sbjct: 147 YRAKGLVNWCPKCQTVLANEQV---VDGRCWRHEDTLVEKKELEQWYLRITAYADRLLQD 203

Query: 180 YE---SHPEFILPIER 192
            E     PE +  ++R
Sbjct: 204 LEQLTGWPEKVKAMQR 219



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 28/186 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKSLGN +     ++E G D  R  ++       D  + ++G+         +
Sbjct: 630 LWKPAVMSKSLGNGVMVGPFVKEQGADIARITILFAAPPENDMVWTEEGV---------S 680

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R      +D D +        P A + +D ++     R L+++ E+ +N   +
Sbjct: 681 GAWRFLNRVWRRFAEDKDALTTLEDAFDPAALSGADRALYRALHRTLKKVGEDTENLRFN 740

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++ +  Y     P  + K                +R    +L  F P LA 
Sbjct: 741 TAIAALMELLNALYEYRHKHAPSPVYK--------------RAVRYYLQMLAPFAPHLAE 786

Query: 472 KIFDIL 477
           +++  L
Sbjct: 787 EVWHWL 792


>gi|115398550|ref|XP_001214864.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191747|gb|EAU33447.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 983

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI +   YP+   H+GH     I+DVLARF+R+ G DVL   G D  G     AA
Sbjct: 79  DKQKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHDVLHPMGWDAFGLPAENAA 138

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    +     +  S+  D  + T     ++  + ++ K+ +KG  Y
Sbjct: 139 IERGIDPAEWTRDNIARMKAQLRSISTSFDWDRELATCAPEFYEHTQRIFLKLYEKGLAY 198

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +  + +FFR++A+++ LL   
Sbjct: 199 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLNLKQWFFRITAFKEALLKDL 255

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 256 DSLSGGWPERVLTMQR 271


>gi|206891188|ref|YP_002249023.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206743126|gb|ACI22183.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 868

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y      YP+ + H+GH     I DV+AR+ R+ GL VL   G D  G     AA 
Sbjct: 32  KQKFYCLEMFPYPSGRIHMGHVRNYAIGDVIARYKRMKGLKVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             GV    +  +N    ++    L +SYD    + T    ++   + ++ K+ ++G  Y 
Sbjct: 92  KHGVHPAKWTYENIDYMKNQLIKLGLSYDWRREVTTCSPEYYKWNQWIFLKLYERGLAYR 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K  +  W         N+  +    DG  +  +   V+  E E +F +++AY ++LL   
Sbjct: 152 KSSFVNWCPSCATVLANEQVI----DGACWRCETQ-VEQKELEQWFLKITAYAEELLKDC 206

Query: 179 -YYESHPEFILPIER 192
                 PE +L ++R
Sbjct: 207 DRLTGWPEKVLTMQR 221



 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 44/219 (20%)

Query: 286 LPKKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            PK+V   G  +H G        EK+SKS  N+IDP E+IE+ G D +R F +      K
Sbjct: 576 FPKEV-KDGKCIHCGSSVTVGRVEKMSKSKKNIIDPDEMIEQYGTDTVRVFTLFAAPPEK 634

Query: 338 DGFYDKDGLK------KRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAF---- 383
           D  +   G++      KRV A +      +    +S       GM       P  +    
Sbjct: 635 DLEWSSQGVEGAHRFLKRVYALIFKHNKWIREIHISESEASSIGMTEEGHAEPAFYCHSE 694

Query: 384 ---TESDES----ILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWE 435
              +ES+ES    I+S+  R ++ +  +++ +   + A+A+++  V+EV  Y    +P  
Sbjct: 695 PKRSESEESPISPIISLIHRTIKRVTLDIEKEYQFNTAIARLMEFVNEVYGY----EP-- 748

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             KT  +R      V    IR   ILL  F P +A +++
Sbjct: 749 --KTEEERK-----VFKFAIRNFLILLSPFAPHIAEELW 780


>gi|188997245|ref|YP_001931496.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932312|gb|ACD66942.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 977

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 24/263 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+    D  +  F+P  L V G DI+ F    W A ++      
Sbjct: 542 VLDTWFSSALWPFGTLGWPSRKDDLET-FYPTSLLVTGFDIIFF----WVARMIMMGTKF 596

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           + ++P  K V+ H  +   KGEK+SK+ GNVIDP+E+ E+ G DALR+ L    A G+D 
Sbjct: 597 TNDVPF-KDVYIHALVRDEKGEKMSKTKGNVIDPLEMAEKYGSDALRFTLASLAAQGRDI 655

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSR 396
                  +KR+      +N I N  S+ V +  +DYDG       + +  D  IL+  ++
Sbjct: 656 RLS----EKRIEGYKHFSNKIWN-ASKFVLINSEDYDGKTNLESLSLSIEDYWILTKLNK 710

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++   + ++N   +     +         D Y +  K   + K + +   T L V   V
Sbjct: 711 TIESSTKELENYRYNEYANILYDFFWHDYCDWYIELSKE-RIYKGSSEEKKTALTVLNFV 769

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +R+   LL   +P +  +I+  L
Sbjct: 770 LRESLKLLHPIMPYITEEIYSYL 792



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 5  EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +K Y S  +  PN     HIGHA  + + D++ R+ R+ G +VL+  G D  G
Sbjct: 30 KKPYFSVVMPPPNVTGSLHIGHALNVTLQDIMVRYKRMQGYNVLWLPGFDHAG 82


>gi|225550367|ref|ZP_03771316.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379521|gb|EEH01883.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 874

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 20/258 (7%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSH 293
           L TT +  N D    +++P  L V G DIL F    W + +++ +  L +K     V  H
Sbjct: 459 LLTTKWNSN-DQFFKRYFPTALMVTGMDILFF----WVSRMMNFSQYLVQKRPFKDVLIH 513

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G I   +G+K+SKSLGN IDP ++I E G+D +R F       G+D  +  + L    N 
Sbjct: 514 GLIRDAQGKKMSKSLGNGIDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLG--ANW 571

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +  N I N+     ++   +    I     F + ++ I++  S++  E+ +NM    +  
Sbjct: 572 NYLNKIWNIAKYIENLDEINESFSIQNVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVV 631

Query: 413 ALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469
           A   +   +  +    Y +  K      T  +    T+ Y    V  Q+ I+L  F P +
Sbjct: 632 ATKDLYDFIWNTFASNYLEYTKVLLQDTTFKNETIKTIRY----VFNQILIMLHPFAPNI 687

Query: 470 ANKIFDILFVADENRCFQ 487
           + +I+  L   +E+   Q
Sbjct: 688 SEEIWLNLNQTNESILLQ 705



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHAY+  + D+L R+ +L G D     GTD  G
Sbjct: 53 HIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAG 87


>gi|37528097|ref|NP_931442.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787534|emb|CAE16637.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 497

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/356 (19%), Positives = 142/356 (39%), Gaps = 54/356 (15%)

Query: 16  PNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN   H+GH A   + AD+  R  RL G      + +D++   + + A+  G++      
Sbjct: 13  PNGDLHVGHIAGPFLSADIFTRTQRLKGKKCYLISYSDDYQSYLQRKAEEIGISAPALAK 72

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRH-HDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +NS+  ++   ++DI  D ++ + + R+  D  ++L+    D+G I        Y  + E
Sbjct: 73  ENSKKIQESLILIDIKLDHWLESYDNRYFEDAVKMLYHSCLDQGIIAPKVSLEPYCEKCE 132

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQ--------------------------WMEEEGYFF 167
            +    E +   +  +     +P Q                          +   E  F 
Sbjct: 133 KW--GYEAFARGECNHCGESSDPSQCESCAMAPDAFEMKNLRCILCNENVVYKHVERNFL 190

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTFDWGIKIPDD 223
            L    +KL        E IL    R ++ ++V+     G+K+  ++R   + G+K+  D
Sbjct: 191 LLPVIAEKL-------KEKILSSPMRPQLTAWVEEVFAHGIKEWGVTRPN-ESGLKLYSD 242

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---------HVIGKDILRFHAIY 274
             + ++ W   L  YL T   L   +       P DL         + +G D    H + 
Sbjct: 243 ENHRIHTWFMGLAGYLATLKELSEKNADTES--PYDLIYDDNTCMVNFLGMDCSYSHILA 300

Query: 275 WPA-FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +PA  LL+  L      +++ F+   G+  S S  + I   ++++    D++R+++
Sbjct: 301 YPAQILLNDELHFKHAFYTNFFLKLDGKDFSTSRNHAIWVKDIVKNACSDSVRFYV 356


>gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81481385|sp|Q8R9L3|SYI_THETN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 932

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    A       
Sbjct: 529 IMDVWFDSGSSHAAVLE--THPDLK----WPAELYLEGSDQHRGWFQSSLLTAVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  +G K+SKSLGNV+DP EVI+E G D LR ++V
Sbjct: 583 PY-KNVLTHGFVVDGEGRKMSKSLGNVVDPAEVIQEYGADVLRLWVV 628



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I +
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIVVKYKTMRGYDSPYVPGWDTHGLPIEQ 103


>gi|89069121|ref|ZP_01156494.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89045294|gb|EAR51360.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 991

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +    + T G+ +  D  K +++P D+ V G+DIL F    W A ++   L +
Sbjct: 558 VLDTWFSSGLWPIGTLGWPEQTDELK-RYFPTDVLVTGQDILFF----WVARMMMMQLAV 612

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +   H   LH      KG+K+SK+ GNVIDP+E+I+E G D LR+      A G    
Sbjct: 613 VGEAPFHTVYLHQLVRDEKGQKMSKTRGNVIDPLEIIDEYGADPLRFANASMAAIG---- 668

Query: 341 YDKDGLKKRVNADLANGIGNLVSR--------SVSMILKDYDGMIPTPGAFTESDESILS 392
               G+ K ++ D   G  N V++         ++ + +        P      +  I+ 
Sbjct: 669 ----GVLK-LSVDRIKGYRNFVTKLWNACRFAEMNGVFEAGAPPAAPPRPEATVNRWIIG 723

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R+ +E    +     + A   + + V     D Y +  KP  +  T  +RA T   +
Sbjct: 724 ETARIREETDAALAAYRFNDAANGLYAFVWGKVCDWYVEFSKPLLMDGTEEERAETRATM 783

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
              VI Q  ILL   +P +  +++  L
Sbjct: 784 AW-VIDQCLILLHPIMPFVTEELWGTL 809



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA+   + D+L R+HR+ G D L+  G D  G
Sbjct: 52 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAG 86


>gi|329922709|ref|ZP_08278261.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328942051|gb|EGG38334.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 1029

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           ++ VW D+ +       Y   P   K KF   +PAD+   G D  R  F+++   + L +
Sbjct: 513 VIDVWFDSGSMPYAQYHY---PFEDKEKFEQQYPADMICEGIDQTRGWFYSLLAVSTLFT 569

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K V + G IL   G+K+SKS GNVIDP E+IEE G DA R+ L+ + A      
Sbjct: 570 GKAPY-KAVMATGHILDENGQKMSKSKGNVIDPWEIIEEYGTDAFRWALLADSAPWNSKR 628

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES----ILSVCSR 396
           + K G+     + + + + N  + +   +    DG  P    F  SD      ILS  + 
Sbjct: 629 FSK-GIVGEAKSKVVDTLVN--THAFLTLYAGIDGYDPKEHDFKGSDHKLDRWILSRLNS 685

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---------NPDRASTV 447
           ++Q + + +       A+   ++    ++ Y D    W ++++           D+ +  
Sbjct: 686 LIQVVDKGL-------AVNDFLNAAKAIEAYVDELSNWYIRRSRDRFWGSGLGEDKLAAY 738

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
             +T  V+  L+ L+  F P L+  IF
Sbjct: 739 GTLT-HVLLTLSKLMAPFTPMLSEDIF 764



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAAQN 64
           N  PHIGH    +I D + R+  + G  V+   G D HG  +             +  +N
Sbjct: 50  NGAPHIGHVLGRVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGVEKQLGISGKQEIEN 109

Query: 65  AGVTT-----KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            GV       K  V +    +R++ + +      D    T E  + ++   +   I DKG
Sbjct: 110 YGVEAFIKKCKASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYIESVWNILATIHDKG 169

Query: 118 DIYKG 122
            +Y+G
Sbjct: 170 LLYRG 174


>gi|159036691|ref|YP_001535944.1| methionine--tRNA ligase [Salinispora arenicola CNS-205]
 gi|157915526|gb|ABV96953.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 671

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 96/461 (20%), Positives = 183/461 (39%), Gaps = 47/461 (10%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +++ +    PN   H+GH +   + AD   RF R++G +    TG+D++   +   A+  
Sbjct: 123 VFVFSTPPTPNGDLHLGHLSGPYLGADAFVRFQRMNGTEAWHLTGSDDYQSYVVNTARRE 182

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G        + S        ++DI+ D +  T TE  +    R  + ++   G       
Sbjct: 183 GRAPAETAARYSAEIAQTLAMMDINPDQYTVTDTEPGYRQGLRNFFSQVIASGRATVTER 242

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
              +      Y  + +V  G  G   +   N     EE G    +   +    +  ++ P
Sbjct: 243 DALFDGESGRYLYEADVRGGCPGCGESTSGNIC---EECGEPNTVVDLRQPRSNESDAEP 299

Query: 185 E------FILPIER-RNEV-----ISFVKSGLKDLS---LSRKTFD--------WGIKIP 221
                  + LP+ + R+EV     +  V + L++L     +R   D        WG+   
Sbjct: 300 RRAPLARWSLPLHQFRDEVSTHHSLGRVPARLRELGDRLFARPVLDIPLSHPADWGVPPA 359

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL--------HVIGKDILRF 270
             D    +++VW +    +L     L    G++  + W A +        H  G D   +
Sbjct: 360 EKDVDDQVIWVWPEMSYGFLHGIEAL----GARLGRGWQAAVPEQDWKIVHFFGYDNSFY 415

Query: 271 HAIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           HA+ +P     A+      +  H   F L +GEK S S  + I   E+++E  VDA+RYF
Sbjct: 416 HAVLYPVLYRLAHPGWQPDIDYHVNEFYLLEGEKFSTSRRHAIWGKEILDEDTVDAVRYF 475

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L R     +   + +   +  ++  L       ++   + I + YDG  P  G +T    
Sbjct: 476 LSRTRPEAERTNFRRADFRSVLHDTLIGTWQRWLNDLGARIARHYDGKAPDAGIWTPEHS 535

Query: 389 SILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRY 427
           + L+     L  +   ++     +++A A++ +LV+E  R+
Sbjct: 536 AFLARLGGRLDAVTGCLRADGFSLNQAAAELDALVAETLRF 576


>gi|78780160|ref|YP_398272.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78713659|gb|ABB50836.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 918

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 30/288 (10%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           + K F   IK+  D   ++  W  +     +T G+ +  D    K++P  + V G DI+ 
Sbjct: 455 ANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIF 513

Query: 270 FHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           F    W A +       + N+P  + V+ HG +     +K+SKS GN IDPI +IE+ G 
Sbjct: 514 F----WVARMTMMGNTFTNNIPF-RDVYIHGLVRDENNKKMSKSSGNGIDPILLIEKYGS 568

Query: 323 DALRYFLVREIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP 380
           DALR+ L+RE+A  G+D   D D  K   +  + +    N +  +   +L   +      
Sbjct: 569 DALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVL--INKTSNNN 626

Query: 381 GAFTESDESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFD- 429
            +  ESDE  L +C +     L ++   +   L    L +   L+ E       D Y + 
Sbjct: 627 YSLNESDEDSLELCDKWILSKLNQVNIKVAALLKEYKLGESAKLLYEFTWNDFCDWYVEF 686

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A++ +  K+    + S    V ++V+  + +++  F+P +  +++  L
Sbjct: 687 AKQRFNNKEIKNRQLSE--KVLIKVLNDILVMIHPFMPHITEELWHAL 732



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 13/76 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   + DV+ RF RL G +VL   GTD           +A +  +  +++  ++ 
Sbjct: 57  HMGHAFNTALIDVVVRFQRLLGKNVLCLPGTD-----------HASIAVQTILEKQLKSE 105

Query: 81  RDMADVLDISYDDFIR 96
              +D  DI  D+F++
Sbjct: 106 GKTSD--DIGRDEFLK 119


>gi|330723608|gb|AEC45978.1| valyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 831

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 56/350 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+ + +  +F  +      LL +  S  + +  P + R  +IS++++ + D ++SR+ + 
Sbjct: 347 VEILVQPQWFISMKKLAQNLLEHLNSKDKVLFYPSKFRKTMISWMEN-VHDWTISRQLW- 404

Query: 216 WGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           WG +IP             +P       + ++  W  +        G+    D  K K++
Sbjct: 405 WGHRIPVWYKNEEIKVQKQNPGAGWIQDEDVLDTWFSSGLTPFVFLGWPQKLDIVK-KYY 463

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNV 310
           P +L V G DI+ F    W A +    L + KK     V  HG I    G+K+SKSLGN 
Sbjct: 464 PTNLLVTGWDIIFF----WVARMYFLALEITKKKPFNAVLLHGLIRDMNGKKMSKSLGNG 519

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIEE G D LR  L+     G+D  ++ + L       L N + N+     S+  
Sbjct: 520 IDPMEVIEEYGSDVLRATLIFNSTPGQDIKFNIEKL--NAAWSLNNKLWNIAKYIKSLES 577

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K             +     L+V ++ + +        LI +++ + +         F+ 
Sbjct: 578 KKTKQNFVDLWILNK-----LTVLNKTISKYMNKYNFSLISKSINEFV---------FED 623

Query: 431 QKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              W  EL K + +      Y   +V++++ I+L  F+P L + +F  +F
Sbjct: 624 FSSWYIELNKLHQNG-----YHLRKVLKKVLIVLHPFIPFLTDYLFKEIF 668



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          S  +  PN   + H+GHA++  + D + RF +L G DVLF    D  G  IA  A+
Sbjct: 35 SIILPPPNVTGKLHLGHAWDSYLQDTIIRFKKLKGYDVLFLPAVDHAG--IATQAK 88


>gi|153004343|ref|YP_001378668.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027916|gb|ABS25684.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 1052

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ ++ D  +  F+P  +   G DI+     +W A ++   +  
Sbjct: 459 VLDTWFSSALWPFSTMGWPEDTDTLRT-FYPTSVMETGHDII----FFWVARMMMMGIHF 513

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +V      LH      KG+K+SK+ GNVIDP+ + E+ G DALR+ L    A G+D  
Sbjct: 514 MGEVPFRTVYLHPMVRDEKGQKMSKTKGNVIDPLVITEQYGADALRFTLAALTAQGRDIK 573

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVL 398
             KD ++       AN + N  +R   M L+   +  + PT  A T +D  IL+   R +
Sbjct: 574 LAKDRIEG--YRAFANKLWN-ATRFALMNLEGHVHQAVDPTKLAMTPADRWILARTQRAV 630

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +    ++    + A   V   V     D Y +  K   L   +  + +         ++
Sbjct: 631 NDTVTALEGLRFNEAANTVYQFVWGELCDWYIELAKE-ALYGDDAGKKAAAQATLTHALK 689

Query: 457 QLAILLQAFVPKLANKIFDIL 477
              +LL  F+P +  +++ +L
Sbjct: 690 TALLLLHPFMPFITEELWHVL 710



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 14/96 (14%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R +   S  +  PN     H+GHA    + DVL R+ R+ G + L+  GTD        
Sbjct: 38  DRSRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTD-------- 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
              +AG+ T++ V++  R    ++   D+  ++F++
Sbjct: 90  ---HAGIATQMIVEKELRKTEKLSR-HDLGREEFLK 121


>gi|37679095|ref|NP_933704.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|48428521|sp|Q7MN06|SYL_VIBVY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|37197837|dbj|BAC93675.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 857

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+  KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYQKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
              E  PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DTLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L      +NPD
Sbjct: 260 I-AAGHPLAKIAAENNPD 276


>gi|21674370|ref|NP_662435.1| valyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81790947|sp|Q8KC74|SYV_CHLTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21647549|gb|AAM72777.1| valyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 901

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 32/265 (12%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL------ 284
           W+  LT    T  + DN D     F+P D  V G DI+ F    W A ++ A L      
Sbjct: 465 WLWPLTTLGWTGPHSDNDD--LRAFYPTDTLVTGPDIIFF----WVARMIMAGLHFKGDV 518

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P     F+      KG K+SKSLGN  DP++VI+  G DALR+ +V     G+D  + ++
Sbjct: 519 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEE 578

Query: 345 GLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             K  +  + A  I N  SR V M    +    +  +     FT   E ++S   R L  
Sbjct: 579 --KCELGRNFATKIWN-ASRFVFMQREKLFATREEFVEAFANFTPQRE-LMSSAGRWLMS 634

Query: 401 IRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTNPDRASTVLY 449
            R N   +  H+A+A      ++ +V E       D Y +A K         +R    + 
Sbjct: 635 -RYNAMLERYHQAMANFKVNDMVKIVHEFFWGDYCDWYVEALKSELTGDITEERGRHAVC 693

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           + V V+  +   L   +P + ++I+
Sbjct: 694 LAVSVLEGVLKALHPVMPFITDEIW 718


>gi|294501414|ref|YP_003565114.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351351|gb|ADE71680.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 880

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 44/270 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    DK +   +   +     +R  +        ++D  +SR+ + WG +IP   
Sbjct: 364 WFVKMQPLADKAVDLQKQEEKVNFVPDRFEKTYLHWMENIRDWCISRQLW-WGHRIPAWY 422

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               +    ++  W  +     +T G+ D       +++P ++ 
Sbjct: 423 HKETGEVYVDHEAPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFKRYYPTNVL 482

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++   L    K     V  HG +   +G K+SKSLGN +DP+E
Sbjct: 483 VTGYDIIFF----WVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGVDPME 538

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VIE+ G D+LRYFL    + G+D  +  + ++   N   AN I N    +    L + DG
Sbjct: 539 VIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN--FANKIWN----ASRFALMNMDG 592

Query: 376 M----IPTPGAFTESDESILSVCSRVLQEI 401
           +    +   G  + +D+ IL+  +  ++ +
Sbjct: 593 ITFEELDLSGEKSVADKWILTRLNETIEHV 622



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 21/171 (12%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G    AK 
Sbjct: 38  EKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
            +      K   D    NF          Y  FIR                 T ++    
Sbjct: 98  EEKLRSEGKSRYDLGRENFVAETWKWKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             R ++  +  KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 158 AVREVFVTLYKKGLIYRGEYIINWDPATKTALSDIEVIYKDVQGAFYHMRY 208


>gi|78357880|ref|YP_389329.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220285|gb|ABB39634.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 883

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 135/313 (43%), Gaps = 53/313 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY-------------IMYVWIDALT 236
           ++D  +SR+ + WG +IP              D PQ              ++  W  +  
Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCEDCGELIVAMDAPQACKCGSTRLTQDEDVLDTWFSSAL 458

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
              +T G+ D+ +  K +F+P  + V G DIL F    W A ++   L    ++  H   
Sbjct: 459 WPFSTLGWPDSTEELK-QFYPTSVLVTGFDILFF----WVARMMMMGLQFMDEIPFHHVY 513

Query: 297 LHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           +H       G+K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D    +  ++   
Sbjct: 514 IHALVRDEHGKKMSKSTGNVIDPVEMIDKYGTDSLRFTLTAFAAMGRDIKLSEARIEGYR 573

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           +    N I N  +R   M L +     P P       E         L+E++ ++ +   
Sbjct: 574 H--FINKIWN-AARFALMNLPEEQ---PAPCDLAAVQELHHRWILHRLEEVKSSVDSAFT 627

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPD------RASTVLYVTVEVIRQLAILLQA 464
                +    + +   +++    W L+ + PD      R +   +V   V++++ +L+  
Sbjct: 628 GYRFNEAAQTLYKF--FWNELCDWYLELSKPDMQAGGERRARAQFVLWTVLKEVLVLMHP 685

Query: 465 FVPKLANKIFDIL 477
            +P +  +I+++L
Sbjct: 686 VMPFVTAEIWNVL 698



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 24/159 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN     H+GHA  + + D+L RFHR  G  VL+  GTD  G        +++A
Sbjct: 41  SIVIPPPNVTGALHMGHALNLTLQDILCRFHRQKGRKVLWVPGTDHAGIATQNVVERQLA 100

Query: 60  KAAQNA-GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           +  +    +  + F+++  +             R M   +D + + F  T ++      R
Sbjct: 101 REGKGRHDLGREKFIERVWQWREEYGNRILSQIRKMGASVDWTRERF--TMDEGLSRAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++ K+ + G IYKG Y   +  R      DDEV   A+
Sbjct: 159 QVFVKLYEDGLIYKGNYIINWCPRCHTALADDEVDHSAE 197


>gi|297568453|ref|YP_003689797.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924368|gb|ADH85178.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 829

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     I DV+AR+ R+ G +V+   G D  G     AA 
Sbjct: 35  RKKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVIHPMGWDAFGMPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     +  +N    R     L +SY  D  + T + +++   ++ + K+ +KG  Y+
Sbjct: 95  KHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPKYYRWEQLFFLKMLNKGLAYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +    +    +++V  GA  +   A    V   + +G+F +++AY ++LL+  +
Sbjct: 155 KLTTVNWCETCQTVLANEQVINGACWRCDQA----VTPRQMQGWFLKITAYAEELLAGCD 210

Query: 182 ---SHPEFILPIER 192
                PE +L ++R
Sbjct: 211 RLPGWPEKVLTMQR 224



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 40/259 (15%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKI 303
           A +W P D ++ G +    H +Y   F         LS + P    + + G ++  G K+
Sbjct: 528 ADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLSIDEPF-TNLLTQGMVIKDGAKM 586

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E+IE+ G D +R F +      +D  ++  G++         G    +S
Sbjct: 587 SKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAFRFLS 637

Query: 364 RSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
           R    +L + + +       P    E+D ++     + ++++ +++ N    + A++ V+
Sbjct: 638 RIHRFVLDNREMLRAAGEELPADLGEADRTLHRKTHQTIRKVSQDIDNSFQFNTAISAVM 697

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L + +     AQ     K+  P        V  + ++ +  LL   VP L  ++++ L 
Sbjct: 698 ELSNTLFSLNAAQAD---KQPQP-------AVNRQAVQTMLTLLFPMVPHLCAELWEELG 747

Query: 479 VADENRCFQSLDQRLKPGF 497
            A      ++LD++  P F
Sbjct: 748 QA------EALDRQGWPQF 760


>gi|326693728|ref|ZP_08230733.1| leucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 803

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D+++RF R +G +VL   G D  G    + A
Sbjct: 30  KPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRFKRANGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F  +N  +FR+    L +SY  D  I TT+  ++   + +++K+ +KG  Y
Sbjct: 90  MKTGHNPADFTSENIDHFREQIKALGLSYDWDREINTTDPEYYKWTQWIFEKLYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     ++EV  G   +      NPV+      +  +++AY D+L+   
Sbjct: 150 ESNMMVNWDPIDRVVLANEEVIDGKSER----SGNPVERKALRQWVLKITAYADRLVDDL 205

Query: 181 E--SHPEFILPIER 192
           E    PE I   +R
Sbjct: 206 EDLDWPEAIKEQQR 219



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 22/189 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFI 296
           L +PD  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G I
Sbjct: 511 LADPD--KLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMI 568

Query: 297 LHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           L +  EK+SKS GNV++P +++ E G D LR + +      +   + ++G+         
Sbjct: 569 LGENHEKMSKSKGNVVNPDDIVAEFGADTLRVYEMFMGPLTQSKPWSEEGI--------- 619

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            G    + R V  +L D +G +        S E +  +  + ++++ E+++N   + A++
Sbjct: 620 TGSRRWLDR-VWRLLIDDEGQLRDRVTTVNSGE-LDKIYHQTVKKVTEDLENMRFNTAIS 677

Query: 416 QVISLVSEV 424
           Q++  V+E 
Sbjct: 678 QMMVFVNEA 686


>gi|220906506|ref|YP_002481817.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219863117|gb|ACL43456.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 1242

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 27/289 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +     +T G+ D  +     ++P    V G DI+ F    W A
Sbjct: 467 VQLEQDPD-VLDTWFSSGLWPFSTLGWPDRTEDLDF-YYPTSTMVTGFDIIFF----WVA 520

Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       +  +P    V+ HG +     +K+SK+ GN IDP+ +I++ G DALRY L+
Sbjct: 521 RMTMMGKHFTGTMPF-GDVYIHGLVRDENNKKMSKTAGNGIDPLLLIDKYGADALRYTLI 579

Query: 331 REIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--- 385
           RE+A  G+D   + +    +    + +    N +  +   ++ + DG  P    F     
Sbjct: 580 REVAGAGQDIRMEYNRKTDESATVEASRNFANKLWNASRFVMLNLDGHTPAQLGFPNLAD 639

Query: 386 ---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440
              +D  ILS   +V+Q+ RE ++   +  A   +   +     D Y +  K   L++  
Sbjct: 640 LELADRWILSRYQQVVQQTREQIETYGLGEAAKGLYEFIWGDFCDWYIELVKA-RLREEG 698

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             R      V   V+     LL  F+P +  +++  L  AD +  F SL
Sbjct: 699 TSR-RVAQQVLAHVLEGTLKLLHPFMPHITEELWQTLTQAD-SETFLSL 745



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + DVL R+HR+ G + L+  GTD
Sbjct: 65 HMGHAFESALTDVLIRYHRMKGDNTLWLPGTD 96


>gi|55736545|gb|AAV60187.1| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 901

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 461 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 521 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 579

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        + ++    +    A   +D  IL   +
Sbjct: 580 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 636

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++++ EN        A   + + + +   D Y +  K   L   N D       V + 
Sbjct: 637 ETIRKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 695

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  LL   +P +  +IF
Sbjct: 696 TLDQILRLLHPIMPFVTEEIF 716



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 58  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 117

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 118 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 176 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 223


>gi|261349806|ref|ZP_05975223.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860591|gb|EFC92889.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 1090

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 21/276 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    ++ VWID+      +  Y    +     F P D    G D  R  F++    
Sbjct: 552 RIPD----VLDVWIDSGVAGWASLYYPQQQEKFNQWF-PYDFITEGHDQTRGWFYSQLGT 606

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +    +P  KKV  HGF+L + G+K+SKSLGNV+ P EVIE+ G D LR++L+     
Sbjct: 607 GVISMGQVPY-KKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFYLLWASKP 665

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDES--ILS 392
             D  +  D L   VN  + N + N+ V  +  M L +++    T       DE   I+S
Sbjct: 666 WDDLKFVWDEL-LNVNK-MFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDEDNWIIS 723

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRASTVL 448
             + +++E+ E+++    H+A  ++ + + E + R++      + W ++  +PD+     
Sbjct: 724 RANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTW-VESDDPDKLGA-Y 781

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DEN 483
           Y     I +L  +L    P +  +I++ L    DEN
Sbjct: 782 YSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDEN 817


>gi|161611294|ref|YP_139002.2| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|90108443|sp|Q5M5J8|SYV_STRT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        + ++    +    A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++++ EN        A   + + + +   D Y +  K   L   N D       V + 
Sbjct: 619 ETIRKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  LL   +P +  +IF
Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205


>gi|330828603|ref|YP_004391555.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565]
 gi|328803739|gb|AEB48938.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565]
          Length = 858

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   S  +   D     +++V    D   +     PV+  E   +F +++ Y ++LLS  
Sbjct: 151 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLSDI 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DNLEGWPEMVKTMQR 221


>gi|304372814|ref|YP_003856023.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309005|gb|ADM21485.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 824

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 56/350 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+ + +  +F  +      LL +  S  + +  P + R  +IS++++ + D ++SR+ + 
Sbjct: 347 VEILVQPQWFISMKKLAQNLLEHLNSKDKVLFYPSKFRKTMISWMEN-VHDWTISRQIW- 404

Query: 216 WGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           WG +IP             +P       + ++  W  +        G+    D  K K++
Sbjct: 405 WGHRIPVWYKNEEIKVQKQNPGAGWIQDEDVLDTWFSSGLTPFVFLGWPQKLDIVK-KYY 463

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNV 310
           P +L V G DI+ F    W A +    L + KK     V  HG I    G+K+SKSLGN 
Sbjct: 464 PTNLLVTGWDIIFF----WVARMYFLALEITKKKPFNAVLLHGLIRDMNGKKMSKSLGNG 519

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIEE G D LR  L+     G+D  ++ + L       L N + N+     S+  
Sbjct: 520 IDPMEVIEEYGSDVLRATLIFNSTPGQDIKFNIEKL--NAAWSLNNKLWNIAKYIKSLES 577

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K             +     L+V ++ + +        LI +++ + +         F+ 
Sbjct: 578 KKTKQNFVDLWILNK-----LTVLNKTISKYMNKYNFSLISKSINEFV---------FED 623

Query: 431 QKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              W  EL K + +      Y   +V++++ I+L  F+P L + +F  +F
Sbjct: 624 FSSWYIELNKLHQNG-----YHLRKVLKKVLIVLHPFIPFLTDYLFKEIF 668



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          H+GHA++  + D + RF +L G DVLF    D  G  IA  A+
Sbjct: 48 HLGHAWDSYLQDTIIRFKKLKGYDVLFLPAVDHAG--IATQAK 88


>gi|54020305|ref|YP_116201.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823494|sp|Q5ZZL4|SYV_MYCH2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53987478|gb|AAV27679.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 822

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 46/296 (15%)

Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246
           D ++SR+ + WG +IP            D P       + ++  W  +  +     G+  
Sbjct: 396 DWTISRQLW-WGHRIPVWYKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISVFAFLGWPQ 454

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
           N D  K+ F P  L V G DIL F    +Y+ +  +    P  +KV  HG I  + G K+
Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN +DP+E+IE+ G D LR  L+   + GKD  ++ + L    N  L N I N   
Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWN--- 567

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             ++  + D D     P       E+ + +  R   +I +N++         ++ + +  
Sbjct: 568 --IAKYIADLDTFFAKPDLIDLWMENKIYILKR---QIVKNIKKYNFSVIGTEINNFI-- 620

Query: 424 VDRYFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              Y D + +  EL KT  +      +   +++R++ I+L  F+P L + + + +F
Sbjct: 621 ---YGDFSSRYIELIKTRKNG-----FYARKLLRKVLIILHPFLPFLTDFLMEKIF 668



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          PN   Q H+GH++   I D L R+H+L G DVL     D           +AG+ T+V V
Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89

Query: 74 DQN 76
          +++
Sbjct: 90 EED 92


>gi|77412415|ref|ZP_00788722.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161529|gb|EAO72533.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 884

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226
           E   EF  P  R N+        + D  +SR+ + WG +IP             D P+  
Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +     +T G+ D       +++P    V G DI+ F    W + +
Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491

Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  +L    +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    
Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551

Query: 334 ACGKD 338
           A G+D
Sbjct: 552 APGQD 556



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|25010562|ref|NP_734957.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457458|sp|Q8E6S0|SYV_STRA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23094915|emb|CAD46136.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 884

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226
           E   EF  P  R N+        + D  +SR+ + WG +IP             D P+  
Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +     +T G+ D       +++P    V G DI+ F    W + +
Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491

Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  +L    +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    
Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551

Query: 334 ACGKD 338
           A G+D
Sbjct: 552 APGQD 556



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|325283253|ref|YP_004255794.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315062|gb|ADY26177.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 895

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 149/369 (40%), Gaps = 58/369 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +  E +F  +    +++L   +     + P  R  ++       ++D ++SR+ + 
Sbjct: 367 PVEPIISEQWFVNVKPMAERVLKGLDDGDMRLTPA-RHEKINRDWLENIRDWNISRQLW- 424

Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243
           WG +IP                       DP+Y          +   W  +     +T G
Sbjct: 425 WGHQIPAWYDEEGNVYVPDRDNPDLDCDQDPRYAHLKLTRDPDVFDTWFSSNLWPFSTLG 484

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
           + D       KF+P  + V G DIL F    +   A+  +   P  K +  HG  L  KG
Sbjct: 485 WPDTDAPDYRKFYPTSVLVTGYDILFFWVARMQMAAYEHTGQAPF-KDIMLHGLYLDSKG 543

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN IDP+E+ ++ GVDA R+        G+D  +D    ++  N   AN + N
Sbjct: 544 QKMSKSKGNGIDPLELFDQYGVDACRFAFTFLSTGGQDIRHDDRRFEQGRN--FANKLWN 601

Query: 361 ------LVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                 L    V +  +D  G    +   G  + +D  I+S  S V  E    +    I 
Sbjct: 602 ATRFALLRLDGVYLPQEDPAGALRELAASGKLSLADRWIISRLSAVSAEASAQLDELDIG 661

Query: 412 RALAQVISLVSE--VDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A+  + +   +   D Y +A KP  E       R      V   V+ Q+  LL  F+P 
Sbjct: 662 AAIRTLYAFAWDEFCDWYIEASKPALEAGDVQTGR------VLKAVLAQILGLLHPFMPF 715

Query: 469 LANKIFDIL 477
           + ++++  L
Sbjct: 716 ITSELYAAL 724



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 13/76 (17%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           E  K   +  I  PN     H+GHA +  + D L R+ R+ G + L+  G D        
Sbjct: 38  ESPKPPFTIVIPPPNVTGNLHLGHALDNTLIDTLTRYKRMAGFEALYLPGMD-------- 89

Query: 61  AAQNAGVTTKVFVDQN 76
              +AG++T+V V++ 
Sbjct: 90  ---HAGISTQVMVERE 102


>gi|296133361|ref|YP_003640608.1| isoleucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031939|gb|ADG82707.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
          Length = 934

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+ P+      WPADL++ G D  R  F++    +   +   
Sbjct: 530 IMDVWFDSGSSH---KAVLEQPEIWPDLRWPADLYLEGSDQHRGWFNSSLCTSVATTGKA 586

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HGF++  +G K+SKSLGN IDP+EVI ++G D LR ++
Sbjct: 587 PY-KTVLTHGFLVDEQGRKMSKSLGNGIDPLEVINKMGADILRLWV 631



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 21/156 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK  +     Y N   H+GH    ++ D++ +F  +DG D  F  G D HG  I + A 
Sbjct: 47  KEKFILHDGPPYANGDIHLGHTLNKVLKDIIVKFKSMDGFDAPFVPGWDTHGLPIEQQAI 106

Query: 64  NA-GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTC 106
            A G+      +     FR       + Y D  R   KR                H +  
Sbjct: 107 KALGINRH---EVGPVEFRKKCKEYALKYVDIQREQFKRLGCRGDWDNPYLTLQPHFEAK 163

Query: 107 RI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +I ++ +++ KG IYKG    ++    E    + E+
Sbjct: 164 QIEVFGEMAKKGYIYKGLKPVYWCASCETALAEAEI 199


>gi|19746507|ref|NP_607643.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632599|sp|Q8P040|SYV_STRP8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19748714|gb|AAL98142.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 882

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         S E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------SLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|114319561|ref|YP_741244.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312502|sp|Q0ABN3|SYL_ALHEH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114225955|gb|ABI55754.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 864

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 14/189 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  REGEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGRNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   GV    +  +N    R     L  +YD   +F  T +  ++   + L+ ++  KG 
Sbjct: 90  AMKHGVPPARWTRENIETMRGQLQRLGFAYDWDREFA-TCDPEYYRWEQWLFTRLYKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +YK   +  +   D+    +++V  G     G     +  P QW      F R++ Y D+
Sbjct: 149 VYKKTATVNWDPVDQTVLANEQVVDGRGWRSGAVVERRDIP-QW------FLRITDYADE 201

Query: 176 LLSYYESHP 184
           LL   +  P
Sbjct: 202 LLEALDELP 210


>gi|327400640|ref|YP_004341479.1| Valyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316148|gb|AEA46764.1| Valyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 866

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 14/255 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L  TG+  +      K +P  L   G DI+R  A Y    +  L+  +
Sbjct: 449 VLDTWMDSSITPLAITGWPYD-----WKEYPTHLRPQGHDIIRTWAFYTILRSLALANKI 503

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +   +   G K+SKSLGN+I P EV+E+ G DALR +    +  G D  +   
Sbjct: 504 PWYEIVINGMVLGEDGRKMSKSLGNIISPEEVLEKYGADALRQWAATGVV-GSDVIFT-- 560

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
             K+ + A         + R     +KDY            +D  ILS  +R+++++ E+
Sbjct: 561 -WKEVIAASRFQQKFWSILRFTMSHIKDYTPSEDDEKLLRIADRWILSKLNRLIKDVDEH 619

Query: 405 MQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M+N   + AL  + S       D Y +  K   L   + +      +V    +  L  LL
Sbjct: 620 MENYRFNEALKAIRSFTWYEYADNYLEIVKN-RLYSGSDEEKRAAKFVLYNAMDALIRLL 678

Query: 463 QAFVPKLANKIFDIL 477
               P +A + ++I 
Sbjct: 679 APITPFIAEECWNIF 693



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKA 61
           E+    I T   YP    HIG+       D +AR+ R+ G +V+F  G D HG     K 
Sbjct: 32  EKPHYIIDTPPPYPTGSFHIGNTLNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVKV 91

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTC 106
            +  G++               F ++N    R     L  S D   ++I T    ++   
Sbjct: 92  EEMHGISKNDVPREEFRRLCVEFTEKNIEKMRSAMRRLGFSIDWSKEYI-TMYPEYYTKT 150

Query: 107 RILWKKISDKGDIYKG 122
           ++ + ++ ++G IYKG
Sbjct: 151 QVSFVRMYNQGLIYKG 166


>gi|240949589|ref|ZP_04753924.1| leucyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295847|gb|EER46523.1| leucyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 862

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNCLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|283470931|emb|CAQ50142.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 876

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P ++ V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNVLVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|260767228|ref|ZP_05876169.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617736|gb|EEX42914.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 858

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 30/260 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY  +
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 201

Query: 176 LLSYYESH---PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           LL   ++    PE +  ++R    R+E +  +K  +KD +   + +      PD    + 
Sbjct: 202 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVE-LKFAVKDHAQDLEVY---TTRPDTLMGVT 257

Query: 229 YVWIDALTNYLTTTGYLDNP 248
           YV I A  + L T     NP
Sbjct: 258 YVGI-AAGHPLATEAAKSNP 276


>gi|163784806|ref|ZP_02179595.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879925|gb|EDP73640.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 629

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 31/229 (13%)

Query: 196 VISFVKSGLKDLS--LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK- 252
           V S ++  +KD+   +  K    G ++    + ++  W  +      T G+   P+ +  
Sbjct: 196 VFSVIEENIKDVKYFIDLKCEKCGSRVLAQEEDVLDTWFSSALWPFGTLGW---PEKTPE 252

Query: 253 -AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISK 305
             K++P  L V G DI+ F    W A ++   L   K+     V+ H  +   KGEK+SK
Sbjct: 253 LQKYYPTSLLVTGFDIIFF----WVARMIMMGLYFTKEKPFSDVYIHALVRDEKGEKMSK 308

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVS 363
           + GNVIDP+++ E+ G D+LR+ L    A G+D        +KR+    + AN I N  S
Sbjct: 309 TKGNVIDPLDMAEKYGADSLRFTLAALAAQGRDIRLS----EKRIEGYRNFANKIWN-AS 363

Query: 364 RSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           + V   +K+++G I    T    +  D+ I+S     LQ+I  N++N +
Sbjct: 364 KYVLQNVKNFNGNIIQDITSLELSAEDKWIVS----KLQKIISNLENAI 408


>gi|145596005|ref|YP_001160302.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305342|gb|ABP55924.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 872

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 12/228 (5%)

Query: 253 AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           AKF+P  + V G DIL F     + +  + +    P    V  HG +  + G+K+SKS G
Sbjct: 475 AKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGRQPF-DVVALHGMVRDEHGKKMSKSFG 533

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP+  I+  G DA R+ L R    G D    ++  +   N    N + N  +R   +
Sbjct: 534 NVIDPLNWIDRFGADATRFTLTRGANPGGDVAVSEEWCQGSRN--FCNKLWN-ATRFALL 590

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                 G +P+       D  +LS  +RV  E  E  +     +A   +     +   D 
Sbjct: 591 NGAHTQGALPSATELAPVDRWVLSRLARVTAEAEEQFEAYEFAKACDLLYHFAWDEVCDW 650

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  KP  L       A T   V   V+ QL  LL   +P + ++++
Sbjct: 651 YVELTKP--LLAAGGPAADTTRRVLGHVLDQLLRLLHPVIPFVTDELW 696


>gi|77409780|ref|ZP_00786432.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77171610|gb|EAO74827.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 655

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226
           E   EF  P  R N+        + D  +SR+ + WG +IP             D P+  
Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +     +T G+ D       +++P    V G DI+ F    W + +
Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491

Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  +L    +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    
Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551

Query: 334 ACGKD 338
           A G+D
Sbjct: 552 APGQD 556



 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|298243616|ref|ZP_06967423.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556670|gb|EFH90534.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 900

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 24/243 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSL 307
           +++P  +   G DI+ F    W A ++ A +     +P   ++ HG +   KGEK+SKS 
Sbjct: 486 RYYPTAVMETGYDIIFF----WVARMVMAGIHFMGTVPFSTIYLHGLVRDAKGEKMSKSK 541

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV--NADLANGIGNLVSRS 365
            NVIDP+EV+++ G DALR+ L      G     D   +++R+  N + AN I N  SR 
Sbjct: 542 NNVIDPLEVMDKFGTDALRFTLATSSTPGN----DMKLIEERIVGNRNFANKIWN-ASRF 596

Query: 366 VSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           V M   +  G +P   A    T +D  IL   +R+ Q +   + +  +  A  Q+     
Sbjct: 597 VLMSTAEVGGGVPDISAVKPRTLADRWILQRLNRLAQSVTRLINDFQLGEAGRQINDFFW 656

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D Y ++ K  +++     R ST   +   V+ Q   LL  F+P +  +++  L+  
Sbjct: 657 SDYCDWYVESAKV-QMQGDEAMRQSTTAILRA-VLDQSLRLLHPFMPFVTEEVWQHLYRL 714

Query: 481 DEN 483
            E+
Sbjct: 715 TES 717


>gi|77406180|ref|ZP_00783251.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175220|gb|EAO78018.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 883

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226
           E   EF  P  R N+        + D  +SR+ + WG +IP             D P+  
Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +     +T G+ D       +++P    V G DI+ F    W + +
Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491

Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  +L    +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    
Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551

Query: 334 ACGKD 338
           A G+D
Sbjct: 552 APGQD 556



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|218533035|ref|YP_002423851.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218525338|gb|ACK85923.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 906

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 34/276 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+     +W A
Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L L  +       LH      KG K+SKS GNV+DP+++I+  G DALR+ L  
Sbjct: 518 RMMMMGLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577

Query: 332 EIACGKD---GFYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFT 384
             A G+D   G    +G +     + A  + N  +R   M    +  D+      P A  
Sbjct: 578 LAAPGRDIKLGPQRVEGYR-----NFATKLWN-AARFAEMNGCELKADF-----RPEAVR 626

Query: 385 ES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTN 440
           E+ +   L+  ++ + E+ + +     + A A     V  V  D Y +  KP  + +  +
Sbjct: 627 ETLNAWALTEAAKAVTEVAQGITVYRFNDAAAAAYRFVWNVFCDWYLELAKPVLQGEGVD 686

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           P   +        +I Q+A LL  F+P L  +++ I
Sbjct: 687 PAARAETQATVAFLIDQIAKLLHPFMPFLTEELWAI 722



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    I D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERK 96


>gi|317011349|gb|ADU85096.1| valyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 872

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+EVIE+ G D+LR+ L    A G+D       L+   N + AN + N VS
Sbjct: 537 GNVIDPLEVIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAVS 590



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+L R+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 90


>gi|317486342|ref|ZP_07945172.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922412|gb|EFV43668.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 882

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 50/333 (15%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP                ++  W  + 
Sbjct: 399 IRDWCISRQIW-WGHRIPAWTCPQCGKLIVSEEDPTSCPDCGSTELVQESDVLDTWFSSA 457

Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-K 288
               +T G+   PD +K  A F+P  + V G DIL F    W A ++   L     +P K
Sbjct: 458 LWPFSTMGW---PDKTKDLATFYPTSVLVTGFDILFF----WVARMMMMGLHFMDQVPFK 510

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V+ H  +   +G K+SKS GNVIDP+ +IE+ G DALR+ L    A G+D    +D ++
Sbjct: 511 HVYLHALVRDAQGRKMSKSTGNVIDPLVMIEKYGTDALRFTLTAFAAMGRDIRLSEDRIE 570

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              +    N + N    ++  + +D    +          + +L     V +++   ++ 
Sbjct: 571 GYRH--FVNKLWNASRFALMNLPEDVPAAVELDKVQGLHHQWLLHRLEEVKKDVDGAIEA 628

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   +   +     D Y +  KP ++K+  P R +   YV    +R+  IL+   
Sbjct: 629 YRFNDAAQTLYKFLWNEFCDWYLELIKP-DMKEEGP-RKTEAQYVLWTALREFLILMHPI 686

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           +P +  +I+  L     +     L    +PG +
Sbjct: 687 MPFVTAEIWQALPGGAGSDAAVQLLPEARPGCL 719



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 25/169 (14%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     HIGHA    + DVL R  R  G  VL+  GTD  G      + +A  
Sbjct: 41  SIVIPPPNVTGALHIGHALNHTLIDVLCRHARQKGKKVLWLPGTDHAGIATQNVVERALA 100

Query: 64  NAGVT-----TKVFV--------DQNSR---NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G T      + FV        D  +R     R + D +D + + F  T ++      R
Sbjct: 101 KEGKTRHDLGREAFVERVWQWKEDYGNRILNQIRMLGDSVDWTRERF--TMDEGLSKAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHN 155
            ++ ++  +G IYKG Y   +  R      DDEV +    G  Y+ +++
Sbjct: 159 KVFVELYKEGYIYKGKYIINWCSRCHTALADDEVDHMPEKGHLYHVRYD 207


>gi|313678270|ref|YP_004056010.1| valine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950415|gb|ADR25010.1| valine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 829

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 163/356 (45%), Gaps = 45/356 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + P++ +    +F ++     K++++ +S        +R  + ++   + + D +
Sbjct: 343 YSERSNTPIETLVMPQWFVKMENLAKKVINHLKSADHVKFYPKRFIKTVNNWLANMHDWT 402

Query: 209 LSRKTFDWGIKIP---DDPQYIMYV------WI---DALTNYLTTT----GYLDNP--DG 250
           +SR+ + WG +IP      +  + V      W+   D L  + ++      +L  P  D 
Sbjct: 403 ISRQLW-WGHRIPAWYSGNEVKVQVECPGEGWVQDSDVLDTWFSSGIAPFSFLGWPASDE 461

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLG 308
              +++P +L V G DI+ F  +    F L      P + V  HG +  +   K+SKSL 
Sbjct: 462 LLKRYYPTNLLVTGYDIIFFWVVRMYFFSLEFTNKKPFETVLLHGLVRDELNRKMSKSLN 521

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVS 367
           N +DP++VIEE G D+LR+FLV   + G D  +    +KK R    L N + N ++R ++
Sbjct: 522 NGVDPVKVIEEYGSDSLRFFLVTSSSPGLDTRF---SIKKIRSAWGLCNKLWN-IARYIN 577

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M+    D  +  P A   +D  I +    +  +I + M    +  A +++ + +      
Sbjct: 578 ML---DDDNVSEPSA---ADIWINNKLKTLQNKISKAMNKYELTIAGSELSNFI------ 625

Query: 428 FDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           F+    W  EL K  P++        +E +R+L I+   F+P + + ++  ++  D
Sbjct: 626 FNDFSSWYIELLKIYPNKKQ-----ALENLRKLLIIAHPFLPFVTDYLYQSVYKKD 676



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA +  I D + R+ +L+G D  +  G D  G
Sbjct: 51 HIGHALDQYIQDTILRYKKLEGYDTFYIAGMDHAG 85


>gi|307328450|ref|ZP_07607625.1| valyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306885862|gb|EFN16873.1| valyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 877

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S  KF+P  + V G DIL F       F L A    
Sbjct: 457 VLDTWFSSGLWPFSTLGWPEQTE-SMEKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 515

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ ++  G DA+R+ L R    G D    +
Sbjct: 516 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDTYGSDAVRFTLARGANPGVDVPIGE 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P P   + +D  ILS  + V+ E+
Sbjct: 576 DWVQASRN--FANKIWN-ATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVAEV 630


>gi|126729334|ref|ZP_01745148.1| valyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710324|gb|EBA09376.1| valyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 1029

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 14/124 (11%)

Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           +TFD  +++P   DP  ++  W  +    + T G+ + P     +++P D+ + G DIL 
Sbjct: 577 RTFDGPMQLPIFRDPD-VLDTWFSSGLWPIGTLGWPE-PTEEMKRYFPTDVLITGSDILF 634

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVD 323
           F    W A ++   L +  ++  H   LH      KG+K+SK+ GNVIDP+E+++E G D
Sbjct: 635 F----WVARMIMMQLAVVDEIPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEYGAD 690

Query: 324 ALRY 327
           ALR+
Sbjct: 691 ALRF 694



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 14/94 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   + D+L R+HR+ G D L+  G D  G  IA   Q   V  K+  ++N R  
Sbjct: 52  HVGHAFNHTLMDILVRWHRMRGFDTLWQPGQDHAG--IATQLQ---VEKKLKAEKNVRR- 105

Query: 81  RDM--ADVLD------ISYDDFIRTTEKRHHDTC 106
            DM  A+ L+        Y   I    KR  D+C
Sbjct: 106 TDMTRAEFLNHVWDWKTQYGGTIIDQMKRIGDSC 139


>gi|312601628|gb|ADQ90883.1| Valyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 822

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%)

Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246
           D ++SR+ + WG +IP            D P       + ++  W  +  +     G+  
Sbjct: 396 DWTISRQLW-WGHRIPVWYKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQ 454

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
           N D  K+ F P  L V G DIL F    +Y+ +  +    P  +KV  HG I  + G K+
Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           SKSLGN +DP+E+IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+
Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNI 568



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          PN   Q H+GH++   I D L R+H+L G DVL     D           +AG+ T+V V
Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89

Query: 74 DQN 76
          +++
Sbjct: 90 EED 92


>gi|257870820|ref|ZP_05650473.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804984|gb|EEV33806.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 804

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+      W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLEEVDWPESIKEMQR 219



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DFDKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +VIE+ G D LR + +          ++++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVIEQYGADTLRMYEMFMGPLDASIAWNENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ +   M      F  +D  +  V ++ ++++ E+ +    + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYNQTVKKVTEDFEQLHFNTAISQLMV 682

Query: 420 LVSEV 424
            V+E 
Sbjct: 683 FVNEA 687


>gi|229150434|ref|ZP_04278650.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228632927|gb|EEK89540.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 1033

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  V+   G D HG
Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88


>gi|257464816|ref|ZP_05629187.1| leucyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450476|gb|EEV24519.1| leucyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 862

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNCLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|229190296|ref|ZP_04317297.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228593080|gb|EEK50898.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 1033

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|206972102|ref|ZP_03233050.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206733025|gb|EDZ50199.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 1033

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKEKYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|76786857|ref|YP_329179.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|90108440|sp|Q3K2S4|SYV_STRA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76561914|gb|ABA44498.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 884

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226
           E   EF  P  R N+        + D  +SR+ + WG +IP             D P+  
Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +     +T G+ D       +++P    V G DI+ F    W + +
Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491

Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  +L    +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    
Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551

Query: 334 ACGKD 338
           A G+D
Sbjct: 552 APGQD 556



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|308063936|gb|ADO05823.1| valyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 872

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|257415369|ref|ZP_05592363.1| leucyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157197|gb|EEU87157.1| leucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|71894019|ref|YP_279465.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|90101532|sp|Q4A917|SYV_MYCHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71852146|gb|AAZ44754.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 822

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%)

Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246
           D ++SR+ + WG +IP            D P       + ++  W  +  +     G+  
Sbjct: 396 DWTISRQLW-WGHRIPVWCKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQ 454

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
           N D  K+ F P  L V G DIL F    +Y+ +  +    P  +KV  HG I  + G K+
Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           SKSLGN +DP+E+IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+
Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNI 568



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          PN   Q H+GH++   I D L R+H+L G DVL     D           +AG+ T+V V
Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89

Query: 74 DQN 76
          +++
Sbjct: 90 EED 92


>gi|15791020|ref|NP_280844.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236770|ref|YP_001689970.1| isoleucyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74568871|sp|Q9HN97|SYI_HALSA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10581609|gb|AAG20324.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727836|emb|CAP14624.1| isoleucine--tRNA ligase [Halobacterium salinarum R1]
          Length = 1070

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 31/301 (10%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           +   K  + D++++    ++  ++PD    +  VW+D+      T  Y +  D    + W
Sbjct: 505 VDLHKPTVDDITITEDGTEY-TRVPD----VFDVWLDSSVASWGTLNYPEQEDDFD-ELW 558

Query: 257 PADLHVIGKDILRFHAIYWPAFLLS----ANLPLPKKVFSHGFI-LHKGEKISKSLGNVI 311
           PADL +   D  R    +W    +      ++P  ++V  HG+  +  G  +SKS G  I
Sbjct: 559 PADLIMEAHDQTR--GWFWSQLGMGTAALGDVPY-EEVLMHGYANMPDGRGMSKSKGITI 615

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MIL 370
           +P EVI+E G D +R FL+     G D  +  D  +  +  DL N + N+       M L
Sbjct: 616 EPNEVIDEYGADPMRMFLLSVTPQGDDMSFSWDETEN-MQRDL-NILWNVFRFPRPYMAL 673

Query: 371 KDYDGMIPTPGAFTES------------DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            D+D  +P      ++            DE +LS    V  +   + ++   HRAL  V+
Sbjct: 674 DDFDANVPAAFGGDDAGVGIADADLETVDEWLLSRLQHVKADATAHWEDFEQHRALDAVL 733

Query: 419 SLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDI 476
             V E + RY+       + + +   + T  Y T++ V+ ++  LL  + P +  +++  
Sbjct: 734 EFVVEDLSRYYVQVVRERMWEDDASASKTAAYATMQRVLLEVVALLAPYAPFVTEELYSH 793

Query: 477 L 477
           L
Sbjct: 794 L 794


>gi|22536625|ref|NP_687476.1| valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76797752|ref|ZP_00780019.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|81455031|sp|Q8E1B5|SYV_STRA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22533463|gb|AAM99348.1|AE014212_7 valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586900|gb|EAO63391.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 883

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY- 226
           E   EF  P  R N+        + D  +SR+ + WG +IP             D P+  
Sbjct: 379 EDKVEFYPP--RFNDTFMSWMENVHDWVISRQLW-WGHQIPAWYNVNGEMYVGEDAPEGD 435

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +     +T G+ D       +++P    V G DI+ F    W + +
Sbjct: 436 GWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRM 491

Query: 280 LSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  +L    +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    
Sbjct: 492 IFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGS 551

Query: 334 ACGKD 338
           A G+D
Sbjct: 552 APGQD 556



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|315161879|gb|EFU05896.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0645]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|284161481|ref|YP_003400104.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011478|gb|ADB57431.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 1041

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+      T GY L   D    K WPAD    G D  R  F++    + +     P 
Sbjct: 512 VWFDSGVASWGTLGYPLKISDEEFFKIWPADFITEGHDQTRGWFYSQLGASVISFGRAPY 571

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            K V  HGF L  +G K+SKSLGNV++P EVI EVGVD  R +++
Sbjct: 572 -KTVLMHGFTLDEQGRKMSKSLGNVVEPEEVINEVGVDTFRLYVL 615



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTK 70
           Y   + H+G A+  +I D + R+ R+ G  V  T G D HG  I  K  Q  G  TK
Sbjct: 44  YTTGRIHLGTAWNKVIKDTILRYKRMMGYKVTDTPGWDMHGLPIEVKVEQMLGFKTK 100


>gi|315031306|gb|EFT43238.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 804

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLELVDWPESIKDMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+  ++
Sbjct: 677 ISQLMVFVNVANK 689


>gi|310778382|ref|YP_003966715.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747705|gb|ADO82367.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 884

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 26/265 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +K    F+P    V G DIL F    W A ++   L
Sbjct: 452 VLDTWFSSALWPFSTLGW---PDKTKELEMFYPTATLVTGADILFF----WVARMIMMGL 504

Query: 285 ----PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                +P + V+ HG +    G+K+SKSLGN  DP+++I+E G DA+R+ ++   + G+D
Sbjct: 505 YEMEEIPFETVYLHGIVRDENGKKMSKSLGNSPDPLKLIDEYGADAIRFTMLYNTSQGQD 564

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVC 394
             + +  ++  +  + AN   N VSR V M L+ +D  I + G         D+ I S  
Sbjct: 565 VHFSEKLIE--MGRNFANKTWN-VSRFVLMNLEGFD--IKSVGKNELKLELVDKWIFSKF 619

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           ++  +++   +    +  A   V   +     D Y +  K       +     T  YV  
Sbjct: 620 NKTAKDVAAKLDKNTLDEAAKSVYEFLRGDFCDWYVEMAKVRLYNAEDEVSKKTAQYVLW 679

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            ++     LL  F+P L  +I+  L
Sbjct: 680 TILESSLRLLHPFMPFLTEEIWQKL 704


>gi|154151263|ref|YP_001404881.1| valyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153999815|gb|ABS56238.1| valyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 864

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 27/262 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W+D+  + L  TG+    DGS K K +PA +   G DI+R  A Y  + L S  L 
Sbjct: 449 VLDTWMDSSISVLNVTGW----DGSGKPKIFPAQIRPQGHDIIRTWAFY--SILRSVALT 502

Query: 286 LPK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             K   ++  +G +L + G K+SKS GNVI P +++   G DALR +     A G D  +
Sbjct: 503 GSKPWDQILVNGMVLGEDGFKMSKSRGNVIVPEDLVGRYGADALRQWAATGAALGSDIMF 562

Query: 342 DKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             + +    R    + N     ++R  ++I  + +G+         +D  +L+  S  + 
Sbjct: 563 SWNDVIAASRFQTKMWN-----IAR-FALIQLEKEGIDENAPITALADRWLLARLSDTVA 616

Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST--VLYVTVEVI 455
            +   M+N     AL ++     +V  D Y +  K   L   +  R S   VLY   +  
Sbjct: 617 TVSARMENYEFDEALKEIREFAWDVLADNYIELAKG-RLYAGDASRKSACRVLYTAYDA- 674

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  +L  FVP  A + +  L
Sbjct: 675 --LCRMLAPFVPYFAEECYSYL 694



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ +  I T   YP    HIG+A      D  AR+ R+ G +V+F  G D HG       
Sbjct: 36  KKPQFVIDTPPPYPTGNFHIGNALNWCYIDFFARYKRMKGYNVMFPQGWDCHGLPTEVKV 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +     TK   D +   FR M   L +   + +R T +R
Sbjct: 96  EELNHITK--NDVSREEFRKMCRELTLKNIEQMRLTLRR 132


>gi|254361090|ref|ZP_04977235.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153092576|gb|EDN73631.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 861

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNQLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|315151630|gb|EFT95646.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|256854338|ref|ZP_05559702.1| leucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256709898|gb|EEU24942.1| leucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|323479993|gb|ADX79432.1| leucyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 804

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLELVDWPESIKDMQR 219



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 677 ISQLMVFVNEANK 689


>gi|227554917|ref|ZP_03984964.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175943|gb|EEI56915.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315573422|gb|EFU85613.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581340|gb|EFU93531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|72080999|ref|YP_288057.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|90101531|sp|Q4A755|SYV_MYCH7 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71914123|gb|AAZ54034.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 822

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 27/178 (15%)

Query: 206 DLSLSRKTFDWGIKIP------------DDP-------QYIMYVWIDALTNYLTTTGYLD 246
           D ++SR+ + WG +IP            D P       + ++  W  +  +     G+  
Sbjct: 396 DWTISRQLW-WGHRIPVWCKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQ 454

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
           N D  K+ F P  L V G DIL F    +Y+ +  +    P  +KV  HG I  + G K+
Sbjct: 455 NFDLIKSYF-PTSLLVTGWDILFFWVARMYFSSLFIMKQKPF-EKVLLHGLIRDEIGRKM 512

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           SKSLGN +DP+E+IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+
Sbjct: 513 SKSLGNGLDPMEIIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNI 568



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%)

Query: 16 PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          PN   Q H+GH++   I D L R+H+L G DVL     D           +AG+ T+V V
Sbjct: 41 PNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVD-----------HAGIATQVKV 89

Query: 74 DQN 76
          +++
Sbjct: 90 EED 92


>gi|311031449|ref|ZP_07709539.1| valyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 882

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++   L  
Sbjct: 448 VLDTWFSSALWPFSTMGWPETESLDYQRYYPTSTLVTGYDIIFF----WVSRMIFQGLEF 503

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DP+EVIE+ G D+LRYFL    + G+D  
Sbjct: 504 TGERPFKDVLIHGLVRDEQGRKMSKSLGNGVDPMEVIEKYGADSLRYFLSTGSSPGQDLR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +  + ++   N   AN I N  SR   M + D     I   G  + +D+ IL+  +  ++
Sbjct: 564 FSYEKVESTWN--FANKIWN-ASRFALMNMDDMKFEDIDLSGEKSVADKWILTRLNETIE 620

Query: 400 EI 401
            +
Sbjct: 621 TV 622



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 13/79 (16%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++K   +  I  PN   + H+GHA++  + D++ R  R+ G DVL+  G D        
Sbjct: 36  DQDKTPYTIVIPPPNVTGRLHLGHAWDTTLQDIITRMKRMQGFDVLWLPGMD-------- 87

Query: 61  AAQNAGVTTKVFVDQNSRN 79
              +AG+ T+  VD+  RN
Sbjct: 88  ---HAGIATQAKVDEKLRN 103


>gi|330432437|gb|AEC17496.1| leucyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 860

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L  SY  D  I T + +++   +  + ++  KG IYK
Sbjct: 92  KNKAAPATWTYDNIEYMKNQLKMLGFSYDWDREIATCKPQYYKWEQWFFTELYKKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V    DG  +     PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSTVNWCPNDQTVLANEQV---NDGCCWRCD-TPVEQKEIPQWFVKITDYAEQLLQGLD 207

Query: 182 SHPEF 186
             PE+
Sbjct: 208 QLPEW 212


>gi|261839881|gb|ACX99646.1| valyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 872

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|229548742|ref|ZP_04437467.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255973878|ref|ZP_05424464.1| leucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617686|ref|ZP_05474532.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761563|ref|ZP_05502143.1| leucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256959928|ref|ZP_05564099.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964366|ref|ZP_05568537.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257081058|ref|ZP_05575419.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257083719|ref|ZP_05578080.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257089228|ref|ZP_05583589.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418403|ref|ZP_05595397.1| leucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293383508|ref|ZP_06629419.1| leucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293386666|ref|ZP_06631240.1| leucine--tRNA ligase [Enterococcus faecalis S613]
 gi|307271410|ref|ZP_07552684.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307284366|ref|ZP_07564531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289503|ref|ZP_07569449.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312901661|ref|ZP_07760931.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312905044|ref|ZP_07764169.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312907126|ref|ZP_07766119.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312951828|ref|ZP_07770719.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312979295|ref|ZP_07790993.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|229306135|gb|EEN72131.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255966750|gb|EET97372.1| leucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597213|gb|EEU16389.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682814|gb|EEU22509.1| leucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256950424|gb|EEU67056.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954862|gb|EEU71494.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256989088|gb|EEU76390.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256991749|gb|EEU79051.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256998040|gb|EEU84560.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160231|gb|EEU90191.1| leucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079142|gb|EFE16506.1| leucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083883|gb|EFE20846.1| leucine--tRNA ligase [Enterococcus faecalis S613]
 gi|306499521|gb|EFM68892.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306503306|gb|EFM72558.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306511905|gb|EFM80901.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|310626903|gb|EFQ10186.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310630231|gb|EFQ13514.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310631623|gb|EFQ14906.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311287889|gb|EFQ66445.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291272|gb|EFQ69828.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315145192|gb|EFT89208.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315154255|gb|EFT98271.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315154872|gb|EFT98888.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315164608|gb|EFU08625.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315166992|gb|EFU11009.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170867|gb|EFU14884.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315576576|gb|EFU88767.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|327534387|gb|AEA93221.1| leucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|242823854|ref|XP_002488143.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218713064|gb|EED12489.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1000

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVL+RF+R+ G DVL   G D  G     AA
Sbjct: 92  DRPKSYILSMFPYPSGTMHMGHLRVYTISDVLSRFYRMRGHDVLHPIGWDAFGLPAENAA 151

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              GV    +  QN    ++        +D   + +  + + +  T RI    + +KG  
Sbjct: 152 IERGVQPAKWTAQNIERMKEQLRSFGPGFDWERELMTCSPEFYKHTQRIFL-MLYEKGLA 210

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++A++++LL  
Sbjct: 211 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLKLKQWFFRITAFKEELLKD 267

Query: 180 YES----HPEFILPIER 192
            +S     P+ +L ++R
Sbjct: 268 LDSLSGGWPDRVLSMQR 284


>gi|315180853|gb|ADT87767.1| leucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 858

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 30/260 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY  +
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 201

Query: 176 LLSYYESH---PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           LL   ++    PE +  ++R    R+E +  +K  +KD +   + +      PD    + 
Sbjct: 202 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVE-LKFAVKDHAQDLEVY---TTRPDTLMGVT 257

Query: 229 YVWIDALTNYLTTTGYLDNP 248
           YV I A  + L T     NP
Sbjct: 258 YVGI-AAGHPLATEAAKSNP 276


>gi|315173068|gb|EFU17085.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 20/187 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+ + G D LR + +          ++++GL+         G  
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 640

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + D M       T +D  +  V  + ++++ E+M N   + A++Q++ 
Sbjct: 641 KFLDRVWRLIVDEEDKM--RDRITTINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMV 698

Query: 420 LVSEVDR 426
            V+E ++
Sbjct: 699 FVNEANK 705


>gi|315148307|gb|EFT92323.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGMVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|255971258|ref|ZP_05421844.1| leucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255962276|gb|EET94752.1| leucyl-tRNA synthetase [Enterococcus faecalis T1]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|300859685|ref|ZP_07105773.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|300850503|gb|EFK78252.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 804

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLELVDWPESIKDMQR 219



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 677 ISQLMVFVNEANK 689


>gi|119477447|ref|ZP_01617638.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449373|gb|EAW30612.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 825

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K Y  T   YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  EKDKYYCLTMFPYPSGNLHMGHVRNYSIGDVISRYQRMLGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    + D N    R+    L  +YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  VKHNTAPGKWTDSNIAYMRNQLKQLGFAYDWSKELATCKPDYYRWEQWFFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   +  +   DE    +++V  G   +       PV+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPEDETVLANEQVIDGCCWRC----DTPVERKEIPQWFIKITEYADQLLADL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE +  ++R
Sbjct: 207 DQLDGWPEQVKTMQR 221



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D   A +W P D ++ G +    H +Y   F        L++ + P   ++   G +L  
Sbjct: 523 DADAANYWLPVDQYIGGIEHAILHLLYARFFHKLMRDEGLINCDEPF-DRLLCQGMVLKD 581

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALR 326
           G K+SKS GN +DP E+IE+ G D++R
Sbjct: 582 GTKMSKSKGNTVDPQEMIEQYGADSVR 608


>gi|261493583|ref|ZP_05990103.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495421|ref|ZP_05991869.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308926|gb|EEY10181.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310765|gb|EEY11948.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 861

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLNQLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|257086155|ref|ZP_05580516.1| leucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256994185|gb|EEU81487.1| leucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315027603|gb|EFT39535.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 820

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|229172908|ref|ZP_04300462.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228610653|gb|EEK67921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 1033

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDAKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|190150200|ref|YP_001968725.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|238692395|sp|B3H1L1|SYL_ACTP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189915331|gb|ACE61583.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 834

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T  + ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRQEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V++G   +       PV+  E   +F +++ Y ++LL++ +
Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|254779703|ref|YP_003057809.1| valyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001615|emb|CAX29717.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Helicobacter
           pylori B38]
          Length = 874

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 484 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 538

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 539 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 592



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+L R+ R+DG   L+  G D  G
Sbjct: 58 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 92


>gi|217032547|ref|ZP_03438037.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298735844|ref|YP_003728369.1| valyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216945752|gb|EEC24376.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298355033|emb|CBI65905.1| valyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 872

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+L R+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 90


>gi|317012930|gb|ADU83538.1| valyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 872

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|313818419|gb|EFS56133.1| leucyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|314960145|gb|EFT04247.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|315085801|gb|EFT57777.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
          Length = 826

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LVYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKTIDS 707


>gi|229546656|ref|ZP_04435381.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|307276217|ref|ZP_07557347.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307296175|ref|ZP_07576005.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229308223|gb|EEN74210.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|306496149|gb|EFM65729.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306507129|gb|EFM76269.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315030502|gb|EFT42434.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315159956|gb|EFU03973.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 820

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 46  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 106 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 165

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 166 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 219

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 220 DLELVDWPESIKDMQR 235



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 530 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 590 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 649

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 650 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 692

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 693 ISQLMVFVNEANK 705


>gi|308184894|ref|YP_003929027.1| valyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060814|gb|ADO02710.1| valyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 872

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|256376783|ref|YP_003100443.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
 gi|255921086|gb|ACU36597.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
          Length = 542

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 48/372 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M       +  A    N   H+GH A   + ADV AR+ +  G  V++TT TD+    + 
Sbjct: 1   MTTARPAVVIAATPTSNGDLHVGHLAGPYLSADVYARYLKATGRPVVYTTCTDDSQSYVV 60

Query: 60  KAAQNAGVTTKVFV----DQNSRNFRDMADVLD-------------ISYDDFIRTTEKRH 102
             A   G+  +  V    +Q SR+      ++              + Y   +    +  
Sbjct: 61  STAHRRGLAPEELVRTSTEQISRSLAAAGTLVPGLPPIDERYRRTVLDYLLELHAAGRFQ 120

Query: 103 HDTCRILWKKISDKGDIYKG--------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             T R+ + K +    +Y G        C SG      E   + +   +  D +Y     
Sbjct: 121 PRTVRLPYAKNAGV-FLYDGLVSGTCPVCLSGSCGGACENCGHPNNFDELIDPKYTIDPS 179

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           +PV + E+      L  Y+++L SYY S      P   +  +   +   L D+ ++    
Sbjct: 180 DPVVYREQRILVLPLEEYRERLSSYYASRTPRWRP-HAKQLIGELLARPLPDVPVTFPG- 237

Query: 215 DWGIK--IPDDPQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDIL 268
            WGI    P+ P  I+Y WI+A+   + +T +      NP G+  + W A+    G +++
Sbjct: 238 SWGIPAPFPETPGQIVYPWIEAVPAAMYSTWWAATEQGNPPGAADELWRAE---SGAELV 294

Query: 269 RFHAI----YWPAF---LLSAN---LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            FH      +W      +L A+      P     + F   +GEK S S G++I   ++  
Sbjct: 295 YFHGFDNVYHWGLVDLVMLMAHGDRYTTPDANVCNEFYDLEGEKFSTSRGHLIWGADLFA 354

Query: 319 EVGVDALRYFLV 330
           EV  D +R++L 
Sbjct: 355 EVPRDLVRFYLA 366


>gi|188518664|ref|ZP_03004101.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188997721|gb|EDU66818.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
          Length = 874

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 20/258 (7%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSH 293
           L TT +  N D    +++P  L V G DIL F    W + +++ +  L +K     V  H
Sbjct: 459 LLTTKWNSN-DQFFKRYFPTALMVTGMDILFF----WVSRMMNFSQYLVQKRPFKDVLIH 513

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G I   +G+K+SKSLGN IDP ++I E G+D +R F       G+D  +  + L    N 
Sbjct: 514 GLIRDAQGKKMSKSLGNGIDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLG--ANW 571

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +  N I N+     ++   +    I     F + ++ I++  S++  E+ +NM    +  
Sbjct: 572 NYLNKIWNIAKYIENLDEINESFSIQDVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVV 631

Query: 413 ALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469
           A   +   +  +    Y +  K      T  +    T+ Y    V  Q+ I+L  F P +
Sbjct: 632 ATKDLYDFIWNTFASNYLEYTKVLLQDTTFKNETIKTIRY----VFNQILIMLHPFAPNI 687

Query: 470 ANKIFDILFVADENRCFQ 487
           + +I+  L   +E+   Q
Sbjct: 688 SEEIWLNLNQTNESILLQ 705



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHAY+  + D+L R+ +L G D     GTD  G
Sbjct: 53 HIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAG 87


>gi|29375390|ref|NP_814544.1| leucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|48428540|sp|Q837N5|SYL_ENTFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29342850|gb|AAO80614.1| leucyl-tRNA synthetase [Enterococcus faecalis V583]
          Length = 804

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLELVDWPESIKDMQR 219



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 677 ISQLMVFVNEANK 689


>gi|261405376|ref|YP_003241617.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281839|gb|ACX63810.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 889

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P  + V G DI+ F    + +     +  +
Sbjct: 457 VLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTSVLVTGYDIIPFWVSRMIFQGLEFTGQM 516

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN IDP+EVIE+ G DA+RY +      G+D  +  
Sbjct: 517 PF-KDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRW 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401
           + +++  N   AN I N  SR   M L+ +    I   G    +D  IL   +   ++I
Sbjct: 576 ERVEQARN--FANKIWN-ASRFALMNLEGFTAADIDISGELGTADRWILHRLNETSRDI 631



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D+L R  R+ G D L+  G+D  G     K+ +  +  GVT        
Sbjct: 60  HIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREK 119

Query: 69  --TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYK 121
              KV  + D  +   RD    + +S  D+ R   T ++   +  R ++ K+ DKG IY+
Sbjct: 120 FLEKVWEWKDLYANTIRDQWSKIGLSL-DYSRERFTLDEGLSEAVREVFVKLYDKGLIYR 178

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           G     +        +D EV YK  +G  Y+ Q+
Sbjct: 179 GKRIINWDPAARTALSDIEVEYKEVNGHLYHLQY 212


>gi|108563517|ref|YP_627833.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837290|gb|ABF85159.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 874

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 484 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 538

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 539 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 592



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 58 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 92


>gi|315080792|gb|EFT52768.1| leucyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 826

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL GLDVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGLDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|256957334|ref|ZP_05561505.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077670|ref|ZP_05572031.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257421052|ref|ZP_05598042.1| leucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779827|ref|ZP_06745213.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270140|ref|ZP_07551457.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256947830|gb|EEU64462.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985700|gb|EEU73002.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257162876|gb|EEU92836.1| leucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453101|gb|EFG21517.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113985|emb|CBL32622.1| leucyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306513509|gb|EFM82124.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315035310|gb|EFT47242.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|329577672|gb|EGG59101.1| leucine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 804

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 150 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLELVDWPESIKDMQR 219



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  V  + ++++ E+M N   + A
Sbjct: 634 IVDEEGKMRDRITTI-----------------NDGRLTKVYHQTVKKVTEDMANLHFNTA 676

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 677 ISQLMVFVNEANK 689


>gi|219558447|ref|ZP_03537523.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T17]
          Length = 757

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 502

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 503 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 562

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 563 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 618

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 619 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 672

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 673 QGLTHTTAVLAAGLDTLLRLLHP 695



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69
           H+GHA E  + D L R  R+ G +VL+  GTD  G        Q++A   K  ++ G   
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 117

Query: 70  KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           ++FVD+                R + D +D S D F  T ++      R ++K++ D G 
Sbjct: 118 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 175

Query: 119 IYKG 122
           IY+ 
Sbjct: 176 IYRA 179


>gi|195953150|ref|YP_002121440.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|259511505|sp|B4U8K1|SYI_HYDS0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195932762|gb|ACG57462.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 937

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 36/266 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++ +       P G +     AD+++ G D  R  F A    +       
Sbjct: 555 ILDVWFDSGSSHASVL----RPRGIEK----ADVYLEGSDQHRGWFQASLLESIASYGEA 606

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-----IACGKD 338
           P  K V +HGF +  KG K+SKS GNVI P+E+I+E G D LR +++ E     I  GK 
Sbjct: 607 PF-KSVVTHGFTVDEKGHKMSKSQGNVISPLEIIKEYGADILRLWVISEDYTEDIKLGKS 665

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                    K++   L   +GNL        +         P      D  + +  S+V 
Sbjct: 666 ILKRLAEDYKKIRNTLRYCLGNLYDFKYEFSI--------APDKLHHFDRYMYAYASKVF 717

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVD---RYFDAQKP--WELKKTNPDR--ASTVLYVT 451
           +E+    +N   HR   +++  VS +D    YFD  K   +  K  + +R  A TVLY  
Sbjct: 718 EELFSFYKNYQYHRFYHRLMEFVS-IDLSALYFDVLKDRLYMYKSGSFERLSAQTVLYF- 775

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
             +++ L ILL   +   A + +  +
Sbjct: 776 --LLKNLTILLSPVLSFTAEETYSYM 799



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I+ D++ +   ++G DV +  G D HG  I +  +      K+  +
Sbjct: 56  YANGNIHIGHALNKILKDIICKVALIEGFDVDYKPGWDCHGLPIEQQVEKELKAKKINKE 115

Query: 75  QNSRN-FRDM-----ADVLDISYDDFIR 96
              ++ FR +     +  + I  ++F+R
Sbjct: 116 SMPKDEFRRLCREYASKFVSIQKEEFLR 143


>gi|229196425|ref|ZP_04323172.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228587062|gb|EEK45133.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 1033

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMSGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|33596600|ref|NP_884243.1| isoleucyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81427187|sp|Q7W8Z2|SYI_BORPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33573301|emb|CAE37284.1| isoleucyl-tRNA synthetase [Bordetella parapertussis]
          Length = 953

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 13/202 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D   GS       WPADL++ G D  R  FH+      +L  + 
Sbjct: 546 VWFDSGSTHATVLGGKDGVLGSSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGHP 605

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401
             + KRV  +    I N + R +   + D+D  G     G   E D   L++ +++  E+
Sbjct: 665 --ILKRV-VESYRRIRNTL-RFLLANVADFDAVGQAVPYGELFEIDRYALAMTAQMQAEV 720

Query: 402 RENMQNQLIHRALAQVISLVSE 423
           + + +    H A++++ +  SE
Sbjct: 721 QGHYERYDFHPAVSRLQTFCSE 742



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K      V +K        +D+  ++F+ +  VL   ++ ++        D  R
Sbjct: 105 IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLG-VLGDWHNPYLTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG 122
           +L  +I +KG +++G
Sbjct: 164 VL-GRILEKGYVFRG 177


>gi|322376122|ref|ZP_08050631.1| valine--tRNA ligase [Streptococcus sp. C300]
 gi|321278890|gb|EFX55934.1| valine--tRNA ligase [Streptococcus sp. C300]
          Length = 883

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDMDSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+ +
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|210135312|ref|YP_002301751.1| valyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133280|gb|ACJ08271.1| valyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 872

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|171920754|ref|ZP_02931957.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185179054|ref|ZP_02964793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024300|ref|ZP_02996988.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188524452|ref|ZP_03004463.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867607|ref|ZP_03079609.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273678|ref|ZP_03206213.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554355|ref|YP_002284667.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225551246|ref|ZP_03772192.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903504|gb|EDT49793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209039|gb|EDU06082.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018974|gb|EDU57014.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|195659607|gb|EDX52987.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660664|gb|EDX53919.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249706|gb|EDY74487.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541856|gb|ACI60085.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379061|gb|EEH01426.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 874

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 20/258 (7%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSH 293
           L TT +  N D    +++P  L V G DIL F    W + +++ +  L +K     V  H
Sbjct: 459 LLTTKWNSN-DQFFKRYFPTALMVTGMDILFF----WVSRMMNFSQYLVQKRPFKDVLIH 513

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G I   +G+K+SKSLGN IDP ++I E G+D +R F       G+D  +  + L    N 
Sbjct: 514 GLIRDAQGKKMSKSLGNGIDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLG--ANW 571

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +  N I N+     ++   +    I     F + ++ I++  S++  E+ +NM    +  
Sbjct: 572 NYLNKIWNIAKYIENLDEINESFSIQDVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVV 631

Query: 413 ALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKL 469
           A   +   +  +    Y +  K      T  +    T+ Y    V  Q+ I+L  F P +
Sbjct: 632 ATKDLYDFIWNTFASNYLEYTKVLLQDTTFKNETIKTIRY----VFNQILIMLHPFAPNI 687

Query: 470 ANKIFDILFVADENRCFQ 487
           + +I+  L   +E+   Q
Sbjct: 688 SEEIWLNLNQTNESILLQ 705



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHAY+  + D+L R+ +L G D     GTD  G
Sbjct: 53 HIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAG 87


>gi|301165609|emb|CBW25180.1| valyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 888

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 153/373 (41%), Gaps = 71/373 (19%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           M  + +F  +     + L   E+      P +  N   S+++   K+  LSR+ + WG +
Sbjct: 361 MVSKQWFLNVQDMSKQALECVENGETNFFPKQWENTYFSWLREP-KNWCLSRQLW-WGHQ 418

Query: 220 IP-----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           IP                              DP  ++  W  +    ++T G+  NP+ 
Sbjct: 419 IPVFNCSDCSHQWASEVDETKCSKCSSENVTQDPD-VLDTWFSSGLWPMSTLGW-PNPER 476

Query: 251 SKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFS----HGFILHK-G 300
            K     KF+P    V G DI+ F    W A ++  +L +  +K FS    H  +  K G
Sbjct: 477 MKERGYDKFFPTTCLVTGFDIIFF----WVARMMMMSLKVTGEKPFSDIYIHALVRDKLG 532

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN +DP+E +EE G DA R+ L      G +   + D  +     +  N I N
Sbjct: 533 RKMSKSLGNGLDPLETVEEYGADAFRFTLA--AGSGYNRGLNLDPERIAGYRNFINKIWN 590

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              R +S  L+   G I  P    + ++ I+S  + V + + ++M+      + A + + 
Sbjct: 591 AF-RFISPFLE--KGDITLPKNLDQQEKWIISELNEVTKVMNDSMEEYRFDDSCAAIYAF 647

Query: 421 VSEVDRYFDAQKPW--ELKKT--------NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           V      +D    W  EL K            R STVL  T    RQ+  LL    P + 
Sbjct: 648 V------YDKFCSWFIELSKNILHGEDQEAAQRRSTVLKYT---FRQIVTLLHPITPFIT 698

Query: 471 NKIFDILFVADEN 483
            +++  L  ++E+
Sbjct: 699 EELWSYLKDSEED 711


>gi|257873265|ref|ZP_05652918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257807429|gb|EEV36251.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 804

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+      W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLEEVDWPESIKEMQR 219



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +VI + G D LR + +          ++++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ +   M      F  +D  +  V  + ++++ E+ +    + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMV 682

Query: 420 LVSEV 424
            V+E 
Sbjct: 683 FVNEA 687


>gi|188527937|ref|YP_001910624.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144177|gb|ACD48594.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 872

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCAMGRDIKLSTTHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|15606596|ref|NP_213976.1| valyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226195|sp|O67411|SYV_AQUAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2983819|gb|AAC07375.1| valyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 1165

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 36/247 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLG 308
            +P DL V G DI+ F    W A ++       K      V+ H  +  K G K+SK++G
Sbjct: 751 LYPTDLLVTGFDIIFF----WVARMIMMGTHFMKDIPFYDVYVHALVRDKYGRKMSKTIG 806

Query: 309 NVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           NVIDP+++IE  G DALR+ L       R+I   ++ F   +G K       AN I N  
Sbjct: 807 NVIDPLDIIERYGADALRFTLAILTVQGRDIKLAEEKF---EGYK-----HFANKIWNAA 858

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
              +    +D+   IP        D+ I++  +   +E+ + ++N    +A   +     
Sbjct: 859 RYVLMNTPEDFIARIPYMAPLKPEDKWIITKLNETAEEVNKALENYQYSQAAHAIYEFFW 918

Query: 423 E--VDRYFDAQKPWELKKTNPDRA----------STVLYVTVEVIRQLAILLQAFVPKLA 470
               D Y +  K    KK   D            +T LY    V+ +   +L  F+P + 
Sbjct: 919 SDYCDWYIEFTKERIYKKAPEDNEEEKAKVENERTTALYTLHYVLEKALRILHPFMPYIT 978

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 979 EELWHKL 985


>gi|324326229|gb|ADY21489.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 1033

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYAKLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|257877008|ref|ZP_05656661.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811174|gb|EEV39994.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 804

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+      W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLEEVDWPESIKEMQR 219



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +VI + G D LR + +          ++++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ +   M      F  +D  +  V  + ++++ E+ +    + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMV 682

Query: 420 LVSEV 424
            V+E 
Sbjct: 683 FVNEA 687


>gi|219122368|ref|XP_002181518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406794|gb|EEC46732.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1035

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 30/214 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           ++  W  +      T G+  N +G K     +F+PA     G DI+ F    W A ++  
Sbjct: 566 VLDTWFSSGLWPFATVGWPQN-EGVKGSDFDRFFPASCLETGYDIIFF----WVARMVMM 620

Query: 283 NLPLPKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L  K     V+ HG +    G K+SK+ GNV+DP++ + E G D+LRY LV  +  G
Sbjct: 621 GIELTGKSPFSVVYLHGLVRAADGSKMSKTKGNVLDPLDTVAEFGADSLRYSLVTGVTPG 680

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D   + +  K   N + AN + N         LKD           ++ D + L+V   
Sbjct: 681 QDIPLNME--KIEANRNFANKLWNCCKFVTGNALKD----------LSDEDLASLAVSGP 728

Query: 397 VLQEIRENM---QNQLIHRALAQVISLVSEVDRY 427
           + QE  +++   +  +I +    V S+  ++++Y
Sbjct: 729 IEQEEFDSLLLPERYIISKCHTLVASVTQDIEKY 762



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           H+GHA  + + DVLARFHR+ G  VL+  GTD  G
Sbjct: 161 HMGHAIFVALQDVLARFHRMRGRPVLWLPGTDHAG 195


>gi|126436140|ref|YP_001071831.1| valyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126235940|gb|ABN99340.1| valyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 883

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 92/210 (43%), Gaps = 30/210 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW------- 275
           DP  ++  W  +     +T G+ D      AKF+P  + V G DIL F            
Sbjct: 449 DPD-VLDTWFSSALWPFSTMGWPDRTP-ELAKFYPTTVLVTGYDILFFWVARMMMFGTFV 506

Query: 276 ---PAFLL----SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
              PA  L    +A++P  + VF HG I  + G K+SKS GN IDP++ +E  G DALR+
Sbjct: 507 ADDPALTLDGQRTADVPF-ENVFLHGLIRDEHGRKMSKSRGNGIDPLDWVETFGADALRF 565

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAF 383
            L R  + G D    +D    R + + A  + N  +R   M     +G  P P     A 
Sbjct: 566 TLARGASPGGDLAIGED--HARASRNFATKLFN-ATRFALM-----NGAAPAPLPDVAAL 617

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRA 413
           T++D  IL     V  E+    +     RA
Sbjct: 618 TDADRWILGRLEEVRAEVDAAFEAYEFSRA 647



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + D L R  R+ G +VL+  G D  G   Q + +        TK      +
Sbjct: 60  HMGHALDHTLMDALTRRKRMQGFEVLWLPGMDHAGIATQTLVEKQLAVDGKTKEDFGREL 119

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T +       R ++KK+ D G IY
Sbjct: 120 FIDKVWDWKRESGGTIGAQMRRLGDGVDWSRDRF--TMDDGLSRAVRTIFKKLYDAGLIY 177

Query: 121 KG 122
           + 
Sbjct: 178 QA 179


>gi|320157153|ref|YP_004189532.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932465|gb|ADV87329.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 857

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209
              E  PE +  ++R    R+E +   F   G +DL +
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244


>gi|27363751|ref|NP_759279.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|29337023|sp|Q8DFE2|SYL_VIBVU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27359867|gb|AAO08806.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 857

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209
              E  PE +  ++R    R+E +   F   G +DL +
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244


>gi|317127808|ref|YP_004094090.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315472756|gb|ADU29359.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 1030

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 116/229 (50%), Gaps = 15/229 (6%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD+   G D  R  F+++   + L +   P  K+V S G IL + G K+SKS GNV
Sbjct: 540 KQFPADVIAEGVDQTRGWFYSLLTVSSLFTGKAPY-KRVLSLGHILDEDGRKMSKSKGNV 598

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPI++++  G DALR+ L+ + A   +  + ++ +  +  + L + + ++   S   + 
Sbjct: 599 IDPIDLVKNYGADALRWALLADSAPWNNKRFSEN-VVSQAKSKLVDTLNHV--HSFYTLY 655

Query: 371 KDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            + DG  P     G  +  D+ +LS  + V + ++E++ N        ++  LV +V  +
Sbjct: 656 AEIDGFDPNKHEQGERSLLDKWVLSRLNTVTKNVKEHLDNYDFTAGAREISLLVDQVSNW 715

Query: 428 F---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +     ++ W  +  N D+ +   +   +V+ +++ LL  F P +A  I
Sbjct: 716 YIRRSRERFWS-EGLNDDKLA-AYHTLFKVLVRISRLLAPFTPFIAEDI 762


>gi|315645746|ref|ZP_07898870.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279224|gb|EFU42534.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 889

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P ++ V G DI+ F    + +     +  +
Sbjct: 457 VLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTNVLVTGYDIIPFWVSRMIFQGLEFTDQM 516

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN IDP+EVIE+ G DA+RY +      G+D  +  
Sbjct: 517 PF-KDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRW 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401
           + +++  N   AN I N  SR   M L+ +    I   G    +D  IL   +   ++I
Sbjct: 576 ERVEQARN--FANKIWN-ASRFALMNLEGFTAADIDISGELGTADRWILHRLNETSRDI 631



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D+L R  R+ G D L+  G+D  G     K+ +  +  GVT        
Sbjct: 60  HIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREK 119

Query: 69  --TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYK 121
              KV  + D  +   RD    + +S  D+ R   T ++   +  R ++ K+ DKG IY+
Sbjct: 120 FLEKVWEWKDLYANTIRDQWSKIGLSL-DYSRERFTLDEGLSEAVREVFVKLYDKGLIYR 178

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           G     +        +D EV YK  +G  Y+ Q+
Sbjct: 179 GKRIINWDPAARTALSDIEVEYKEVNGHLYHLQY 212


>gi|307263538|ref|ZP_07545153.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|306871181|gb|EFN02910.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 861

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T  + ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRQEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V++G   +       PV+  E   +F +++ Y ++LL++ +
Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|293606194|ref|ZP_06688557.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292815341|gb|EFF74459.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 953

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 13/202 (6%)

Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D    GS      WPADL++ G D  R  FH+      +L    
Sbjct: 546 VWFDSGSTHATVLGGKDGDFAGSHGAELGWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEI 401
             + KRV  +    I N + R +   + D+D +      G   E D   L++ +++  E+
Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANVADFDAVSQAEPYGELFEIDRYALAMTAQMQSEV 720

Query: 402 RENMQNQLIHRALAQVISLVSE 423
           + N +    H A++++ +  SE
Sbjct: 721 QANYERYDFHPAVSRLQTFCSE 742



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K    A V +K        +D+  ++F+ +  VL      ++        D  R
Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLG-VLGEWDRPYMTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG 122
            L  +I DKG +++G
Sbjct: 164 AL-GRILDKGYVFRG 177


>gi|260893645|ref|YP_003239742.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865786|gb|ACX52892.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 824

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 26/238 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D +K  +W P D ++ G +    H +Y   F        L+S + P    + + G +L  
Sbjct: 520 DKTKVDYWLPVDQYIGGVEHAILHLLYSRFFTKFLYDIGLVSCDEPF-TNLLTQGMVLKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN++ P E+IE  G D  R F++      +D  +  +G++    A   N + 
Sbjct: 579 GAKMSKSKGNIVSPEEIIEHYGADTTRLFILFAAPPERDLEWSDEGVEG--CARFLNRVW 636

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            LV   + ++     G      + +  +  +  +  R ++ +  +++   ++ A++ ++ 
Sbjct: 637 RLVRSLIPVV----QGAGEPAESLSPPNRELRRLTHRTIERVTRDIEEFGLNTAVSAIME 692

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             + + RY +  +P E       R    L    E +  L +LL  F P +A ++++ L
Sbjct: 693 FTNGLARYCEEVRPEE-------RDPGTLR---EAVETLILLLAPFAPYMAEELWEQL 740



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++ K Y      YP+ + H+GH     I DV+ARF R+ G  VL   G D  G     A
Sbjct: 30  EDKPKYYCLEMFPYPSGKLHMGHVRNYAIGDVVARFKRMQGYSVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  QN    R+    L  SYD    I T    ++   + L+ +   +G  
Sbjct: 90  AIKHGIHPHDWTWQNISFMREQLKQLGFSYDWHREIATCHPDYYRWTQWLFLQFFHRGLA 149

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W         N+  V     G        PV   E E +F R++AY ++LL 
Sbjct: 150 YRKKAPVNWCPSCATVLANEQVV-----GGVCERCKTPVVPRELEQWFLRITAYAERLLQ 204


>gi|317177901|dbj|BAJ55690.1| valyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 872

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           HIGHA  + + D+LAR+ R+DG   L+  G D  G     A QN  V  K  +DQ
Sbjct: 56  HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG----IATQN--VVEKQLLDQ 104


>gi|108800524|ref|YP_640721.1| valyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869663|ref|YP_939615.1| valyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108770943|gb|ABG09665.1| valyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695752|gb|ABL92825.1| valyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 883

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 92/210 (43%), Gaps = 30/210 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW------- 275
           DP  ++  W  +     +T G+ D      AKF+P  + V G DIL F            
Sbjct: 449 DPD-VLDTWFSSALWPFSTMGWPDRTP-ELAKFYPTTVLVTGYDILFFWVARMMMFGTFV 506

Query: 276 ---PAFLL----SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
              PA  L    +A++P  + VF HG I  + G K+SKS GN IDP++ +E  G DALR+
Sbjct: 507 ADDPALTLDGQRTADVPF-ENVFLHGLIRDEHGRKMSKSRGNGIDPLDWVETFGADALRF 565

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAF 383
            L R  + G D    +D    R + + A  + N  +R   M     +G  P P     A 
Sbjct: 566 TLARGASPGGDLAIGED--HARASRNFATKLFN-ATRFALM-----NGAAPAPLPDVAAL 617

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRA 413
           T++D  IL     V  E+    +     RA
Sbjct: 618 TDADRWILGRLEEVRAEVDAAFEAYEFSRA 647



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + D L R  R+ G +VL+  G D  G   Q + +        TK      +
Sbjct: 60  HMGHALDHTLMDALTRRKRMQGFEVLWLPGMDHAGIATQTLVEKQLAVDGKTKEDFGREL 119

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T +       R ++KK+ D G IY
Sbjct: 120 FIDKVWDWKRESGGTIGAQMRRLGDGVDWSRDRF--TMDDGLSRAVRTIFKKLYDAGLIY 177

Query: 121 KG 122
           + 
Sbjct: 178 QA 179


>gi|317178546|dbj|BAJ56334.1| valyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 872

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           HIGHA  + + D+LAR+ R+DG   L+  G D  G     A QN  V  K  +DQ
Sbjct: 56  HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG----IATQN--VVEKQLLDQ 104


>gi|85707659|ref|ZP_01038725.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689193|gb|EAQ29196.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 917

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 40/279 (14%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+++  DP  ++  W  +      T G+ +       K +P  L + G DIL     +W 
Sbjct: 473 GVELTQDPD-VLDTWFSSALWPFATLGWPEENAPLLDKHFPNSLLISGFDIL----FFWD 527

Query: 277 AFLLS------ANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A ++          P P+ ++ HG +    G K+SKS GNV+DP+ +I++ G DALR+F+
Sbjct: 528 ARMMMMGQYNMGEAPWPR-LYLHGLVRAADGSKMSKSKGNVVDPLGLIDQFGADALRFFM 586

Query: 330 VREIACGKDGFYDKDGLK-------KRVNAD---LANGIGNLVSRSVSMILKDYDGMIPT 379
               + G+D   D+  ++       K  NA     +NGIG       S  LK        
Sbjct: 587 AAMESQGRDIKMDEKRVEGYRNFATKLWNATRFCQSNGIG------ASTTLK-------A 633

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
           P A   +++ I+       +EI   M +     A   +         D Y +  KP   +
Sbjct: 634 PTARLAANQWIIGEVQAACEEIEAAMADLRFDAAANAIYQFTWSKFCDWYLELIKPVFAE 693

Query: 438 KTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++PD   A     V    + Q+ ++L  F+P +  +++
Sbjct: 694 GSDPDAMPAKETREVAGWALDQILVMLHPFMPFITEELW 732



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 11/62 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + D++ R+ RL G D L+  GTD           +AG+ T++ V++     
Sbjct: 52  HIGHALDNTLQDIVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQMEER 100

Query: 81  RD 82
           +D
Sbjct: 101 QD 102


>gi|261405682|ref|YP_003241923.1| isoleucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282145|gb|ACX64116.1| isoleucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 1029

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           ++ VW D+ +       Y   P   K KF   +PAD+   G D  R  F+++   + L +
Sbjct: 513 VIDVWFDSGSMPYAQYHY---PFEDKEKFEQQYPADMICEGIDQTRGWFYSLLAVSTLFT 569

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K V + G IL   G+K+SKS GNVIDP E+IEE G DA R+ L+ + A      
Sbjct: 570 GKAPY-KAVMATGHILDENGQKMSKSKGNVIDPWEIIEEYGTDAFRWALLADSAPWNSKR 628

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           + K G+     + + + + N  + +   +    DG  P    F  S    D  ILS  + 
Sbjct: 629 FSK-GIVGEAKSKVVDTLVN--THAFLTLYAGIDGYDPKEHDFKGSNHKLDRWILSRLNS 685

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---------NPDRASTV 447
           ++Q + + +       A+   ++    ++ Y D    W ++++           D+ +  
Sbjct: 686 LIQVVDKGL-------AVNDFLNAAKAIEAYVDELSNWYIRRSRDRFWGSGLGEDKLAAY 738

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
             +T  V+  L+ L+  F P L+  IF
Sbjct: 739 GTLT-HVLLTLSKLMAPFTPMLSEDIF 764



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAAQN 64
           N  PHIGH    +I D + R+  + G  V+   G D HG  +             +  +N
Sbjct: 50  NGAPHIGHVLGRVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGVEKQLGISGKQEIEN 109

Query: 65  AGVTT-----KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            GV       K  V +    +R++ + +      D    T E  + ++   +   I DKG
Sbjct: 110 YGVEAFIKKCKASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYIESVWNILATIHDKG 169

Query: 118 DIYKG 122
            +Y+G
Sbjct: 170 LLYRG 174


>gi|315587041|gb|ADU41422.1| valine--tRNA ligase [Helicobacter pylori 35A]
          Length = 872

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|20804107|emb|CAD31310.1| HYPOTHETICAL, FUSION OF HYPOTHETICAL PROTEIN & ONE WITH PARTIAL
           SIMILARITY TO MET-TRNA SYNTHETASES [Mesorhizobium loti
           R7A]
          Length = 684

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 120/311 (38%), Gaps = 38/311 (12%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGKD 266
           DWG+     P  +++VW +    +L     L     S  + W A L        H  G D
Sbjct: 370 DWGLPAEGLPGQVIWVWPEMAFGFLYNIQALAT---SLGRDWNAALPSKDWQIVHFFGFD 426

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSH----------GFILHKGEKISKSLGNVIDPIEV 316
              +HA+ +PA        L  +VFSH           F L  G+K S S G+ +   EV
Sbjct: 427 NSFYHALLYPA--------LYAEVFSHWTPRIRYHVNEFYLLDGQKFSTSRGHAVWGKEV 478

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +    VD +R  L      G+   +  D L++  N        N +      I +D+ G 
Sbjct: 479 LGPKTVDVVRLHLGLTRPEGERTNFTLDALRRTKNEVFQGIWLNWLDALHREIKQDFGGC 538

Query: 377 IPTPGAFTESDESILSVCS--RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P  G +  +D +  +     R   E   +     + RA AQ    VS+   Y  AQ   
Sbjct: 539 VPDAGDWAPADRAFFARIEIHRAAMERAYSDDGFSVRRAAAQACDFVSDCVVYRQAQDYE 598

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRL 493
             ++  P R  T L +       LA  L   +P+ A+ +   +  V+ E   + +  +RL
Sbjct: 599 AARRLYPARTRTSLALQTTAAAILAQTLAPLMPRFASTLARAIDGVSTET--WPTSVRRL 656

Query: 494 KPGFMLHKTFD 504
            PG     TFD
Sbjct: 657 APG----TTFD 663



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  +++ +    PN   H+GH +     ADV  RF R+ G++    TG+D++   +A  A
Sbjct: 137 RGPIFVFSTPPTPNGDLHLGHLSGPYFGADVYTRFLRMKGVEAYHLTGSDDYQSYVATRA 196

Query: 63  QNAGVTTKVFVDQN-SRNFRDMADVLDISYDDFIRT 97
            +A  +T   V +N +   R    +LD     F+ T
Sbjct: 197 -DADQSTPAKVARNYADEIRATLALLDCEVHSFLPT 231


>gi|218232538|ref|YP_002366903.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218160495|gb|ACK60487.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
          Length = 1033

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|229127608|ref|ZP_04256597.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|84029507|sp|Q81E30|SYI2_BACCR RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|228655685|gb|EEL11534.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 1033

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|227517771|ref|ZP_03947820.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074780|gb|EEI12743.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 710

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + A
Sbjct: 41  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQYA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y
Sbjct: 101 LDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAY 160

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL 
Sbjct: 161 EAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRRPMRQWM------LKITAYADRLLE 214

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 215 DLELVDWPESIKDMQR 230



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 525 DFEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 584

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  ++G         RV   
Sbjct: 585 NEKMSKSRGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRL 644

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R  ++                 +D  +  +  + ++++ E+M N   + A
Sbjct: 645 IVDEEGKMRDRITTI-----------------NDGRLTKIYHQTVKKVTEDMANLHFNTA 687

Query: 414 LAQVISLVSEVDR 426
           ++Q++  V+E ++
Sbjct: 688 ISQLMVFVNEANK 700


>gi|325568223|ref|ZP_08144631.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158256|gb|EGC70408.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 804

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+      W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLEEVDWPESIKEMQR 219



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +VI + G D LR + +          ++++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ +   M      F  +D  +  V ++ ++++ E+ +    + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYNQTVKKVTEDYEQLHFNTAISQLMV 682

Query: 420 LVSEV 424
            V+E 
Sbjct: 683 FVNEA 687


>gi|212636651|ref|YP_002313176.1| leucyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212558135|gb|ACJ30589.1| Leucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 865

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 18/254 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     AA 
Sbjct: 38  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 98  KNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   DE    +++V    DG  +      V+  E   +F +++ Y D+LL    
Sbjct: 158 KTANVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYADELLKDID 213

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E I         ++ S ++FD     PD    + YV I A
Sbjct: 214 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDQSFDIYTTRPDTVMGVTYVAI-A 268

Query: 235 LTNYLTTTGYLDNP 248
             + L      +NP
Sbjct: 269 AAHPLAKQAAANNP 282


>gi|261838479|gb|ACX98245.1| valyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 872

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+L R+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILTRYKRMDGYKTLYQPGLDHAG 90


>gi|229029917|ref|ZP_04185986.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228731425|gb|EEL82338.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 1033

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+        +T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKWTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  +       A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDEYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|229079379|ref|ZP_04211921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228703912|gb|EEL56356.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 1033

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|229069741|ref|ZP_04203026.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228713362|gb|EEL65252.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 1033

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|229144806|ref|ZP_04273203.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296502780|ref|YP_003664480.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228638528|gb|EEK94961.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296323832|gb|ADH06760.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 1033

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|229155782|ref|ZP_04283888.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228627768|gb|EEK84489.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 1033

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|222095809|ref|YP_002529866.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221239867|gb|ACM12577.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 1033

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMSGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|312277882|gb|ADQ62539.1| Valyl-tRNA synthetase, putative [Streptococcus thermophilus ND03]
          Length = 883

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        + ++    +    A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++ EN        A   + + + +   D Y +  K   L   N D       V + 
Sbjct: 619 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  LL   +P +  +IF
Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205


>gi|301053711|ref|YP_003791922.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300375880|gb|ADK04784.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 1033

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|228985290|ref|ZP_04145453.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774445|gb|EEM22848.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 1033

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|226226689|ref|YP_002760795.1| valyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089880|dbj|BAH38325.1| valyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 915

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 42/219 (19%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+    DK L+   +    ILP ER   V      G++D ++SR+ + WG ++P   
Sbjct: 375 WFVRMQPLADKALAALRTGELRILP-ERWEAVYVNWLEGIRDWNISRQIW-WGHRVPVWY 432

Query: 222 --------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                        + ++  W  +     +T G+ D+    +A F
Sbjct: 433 CNASCGHAPIVSRTDVTSCPGCGGTVRQDEDVLDTWFSSWLWPFSTLGWPDDTPDLRA-F 491

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFIL-HKGEKISKSLGN 309
           +P D+ V   +IL F    W A ++ +       P    V+ HG +   +  K+SKSLGN
Sbjct: 492 YPGDVLVTAPEILFF----WVARMVMSGCWFLDKPPFHTVYLHGTVRDMQHRKMSKSLGN 547

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            IDP++V+   G DALR+ +V  +  G D   D   L+K
Sbjct: 548 GIDPLDVVRLYGADALRWTMVAGLGLGVDVMLDPTDLEK 586


>gi|161936377|ref|YP_140891.2| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|90108442|sp|Q5M111|SYV_STRT1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        + ++    +    A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++ EN        A   + + + +   D Y +  K   L   N D       V + 
Sbjct: 619 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  LL   +P +  +IF
Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205


>gi|90101533|sp|Q8EX08|SYV_MYCPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 869

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 52/352 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+ M  E +F ++S Y  K++   +S  +    PI+    +I+++ + L D  +SR+ + 
Sbjct: 358 VEPMMSEQWFVKVSEYSKKVIELQKSSKKIQFFPIKFEKNLINWM-TNLNDWCISRQLW- 415

Query: 216 WGIKIP----DDPQYI-----------MYV--------WIDALTNYLTTTGYLDNPDGSK 252
           WG +IP     D + I           +YV        W  +    +TTT  L + D   
Sbjct: 416 WGHQIPVWYKKDSKEIYVGTKPPKNEELYVRDNDVLDTWFSSGLWPITTTDALKSKDA-- 473

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKS 306
              +P ++ V G DI+ F    W   ++  +L L K+V F H +I          K+SKS
Sbjct: 474 --LFPTNVLVTGFDIIFF----WVFRMMFFSLYLKKEVPFKHCYITGLIRDEHNNKMSKS 527

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP +VIE+ G DALR FL+   + G+D  Y ++ +K        N + N   R V
Sbjct: 528 LGNGVDPNDVIEKYGADALRLFLLSSSSPGEDLCYVEEKVKSC--WGFINKLWNSF-RYV 584

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M   D++     TP    + D+ IL+  ++   E  +         ++ +++    +  
Sbjct: 585 EMNSSDFNFDEDKTPKNLEDFDKWILNKFNKAYSEFLQQFNKYNFLVSIKKILDFTWDDF 644

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + Y       EL K       + L+V   +I+++ IL     P + + ++D
Sbjct: 645 CNTYI------ELSKNRTSNQESKLWVLNYLIKKILILFHPMCPFVTSNLYD 690


>gi|84502708|ref|ZP_01000827.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389103|gb|EAQ01901.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 1065

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 19/120 (15%)

Query: 223 DPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAI 273
           DP  ++Y VW +A       ++ L   G L  PD +    K++P  + V G+DIL F   
Sbjct: 620 DPTQVIYPVWREADVLDTWFSSGLWPIGTLGWPDETPEMKKYFPTSVLVTGQDILFF--- 676

Query: 274 YWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            W A ++   L +  +     V+ HG +   KG+K+SK++GNVIDP+E+I+E G DALR+
Sbjct: 677 -WVARMMMMQLAVVGEKPFSDVYLHGLVRDAKGKKMSKTVGNVIDPLEIIDEYGADALRF 735



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 4  REKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          R + Y S  I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G
Sbjct: 34 RSETY-SIMIPPPNVTGSLHVGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAG 86


>gi|308177478|ref|YP_003916884.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744941|emb|CBT75913.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 829

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 14/180 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    + DV+AR+ RL G DV+   G D  G     AA 
Sbjct: 38  RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYWRLRGYDVMHPIGWDSFGLPAENAAI 97

Query: 63  -QNAGVTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA      +  +D  + +F+  A  +   +D  + T++  ++   + L+ K  DKG  
Sbjct: 98  KRNAHPAEWTYKNIDTQAASFKRYA--ISADWDRRLHTSDPEYYRWTQWLFNKFYDKGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+  +   +  +D+    +++V  GA  +   A  + +  QW      +F+++ Y D+LL
Sbjct: 156 YRKDHPVNWCPKDQTVLANEQVVNGACERCGTAVTKKSLNQW------YFKITDYADRLL 209



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 27/203 (13%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+ A  P    + + G +L+ G+ +SKSLGN +D  E +++ GVDA+R  ++       D
Sbjct: 571 LIDATEPF-SALLNQGQVLNGGKAMSKSLGNGVDLGEQLDKFGVDAVRLTMIFASPPEDD 629

Query: 339 GFYDKDGLKKRVNADLA-NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             +          AD++ +G    ++R+  +     D        +   D+++  V  R 
Sbjct: 630 VDW----------ADVSPSGSQKFLARAWRIA---QDTTSEAGADYAAGDKALRQVTHRT 676

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + E  + + +   +  +A+ + LV+   +  D+        T+P           E    
Sbjct: 677 VHESAQLLDSGKFNVVIAKTMELVNATRKTIDSGA----GATDP--------AVREAATV 724

Query: 458 LAILLQAFVPKLANKIFDILFVA 480
           +A LL  F P  A  +++ L  A
Sbjct: 725 VAQLLSMFAPYTAEDMWEALGYA 747


>gi|229178578|ref|ZP_04305942.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228604736|gb|EEK62193.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 1033

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|148263856|ref|YP_001230562.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146397356|gb|ABQ25989.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 886

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 149/353 (42%), Gaps = 53/353 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222
           ++ ++    ++ L+        I+P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WYVKVGPLAEEALAAVRDGKTRIVPQQWENTYYEWMEN-IRDWCISRQIW-WGHRIPAWY 419

Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSK--AK 254
                       DP                ++  W  +     +T G+   PD ++  A 
Sbjct: 420 CDHCGEITVAKVDPTACAKCGSEEIRQETDVLDTWFSSALWPFSTMGW---PDKTQELAS 476

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P    V G DIL F    W A ++   L   ++V      +H      +G+K+SKS G
Sbjct: 477 FYPTSCLVTGFDILFF----WVARMMMMGLHFMEEVPFRDVYIHALVRDAQGQKMSKSKG 532

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP+ VIE  G DA R+ L    A G+D    ++ +    N   AN I N  SR   M
Sbjct: 533 NVIDPLTVIEAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMM 589

Query: 369 ILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-V 424
            L+  D D +       + +D  IL   +    E+ E +     + A A +     SE  
Sbjct: 590 NLEGFDPDAVDADSLELSNADRWILFRLNETAGEVDEALAAYRFNDAAAALYRFTWSEFC 649

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D Y +  K  +L K +  R  T  YV   V+  L  LL  F+P +  +I+  L
Sbjct: 650 DWYIELVKD-DLYKGDSRRQVTARYVLWLVLEHLLRLLHPFMPFITEEIWQTL 701



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 14/80 (17%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD           +AG+
Sbjct: 41  SIVIPPPNITGVLHMGHALNNTLQDILCRWKRMSGFNVLWMPGTD-----------HAGI 89

Query: 68  TTKVFVD-QNSRNFRDMADV 86
            T+  V+ Q S   +D  DV
Sbjct: 90  ATQNVVERQLSAEGKDRHDV 109


>gi|228920925|ref|ZP_04084263.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838714|gb|EEM84017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 1033

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|222100204|ref|YP_002534772.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782448|sp|B9K8X3|SYI_THENN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 918

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 11/103 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VWID+ +++   T   D+P       +P D+++ G D  R  FH+  + A     + P  
Sbjct: 526 VWIDSGSSFEYITTREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY- 577

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           K+V +HGFI  + G K+SKSLGNV+DP+EV+E+ G + LR +L
Sbjct: 578 KEVLTHGFIKDELGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 620


>gi|189083232|sp|Q087K2|SYL_SHEFN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 863

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 18/257 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AINNKASPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTQLYAKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      +Q  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCDTEVIQ-KEIPQWFIKITDYAEELLND 205

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I    +    ++ S  +FD     PD    + YV I
Sbjct: 206 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFA----VADSDASFDIYTTRPDTLMGVTYVAI 261

Query: 233 DALTNYLTTTGYLDNPD 249
            A  + L      +NP+
Sbjct: 262 -AAGHPLAEQSAQNNPE 277


>gi|30020298|ref|NP_831929.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29895848|gb|AAP09130.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus cereus
           ATCC 14579]
          Length = 1035

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 515 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 573

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 574 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 632

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 633 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 690

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 691 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 747

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 748 TISKLIAPFTPFVAEDI 764



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 52 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 90


>gi|317154515|ref|YP_004122563.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944766|gb|ADU63817.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 833

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 12/196 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKSMQGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             GV    +  QN    R+    L  SYD    I +    ++   +  + K  +KG  Y 
Sbjct: 93  KHGVHPAAWTYQNIAEMREQLQRLGYSYDWRREIASCRPEYYKWEQKFFLKFLEKGLAYR 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W    +    N+    +  DG+ +      V+  + E +F R++ Y D+LL+  
Sbjct: 153 KHSPQNWCPDCNTVLANE----QVEDGKCWRCDSE-VEQKDMEQWFLRITDYADELLADL 207

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 208 DSLEGGWPERVLTMQR 223



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 33/197 (16%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L  G K+SKS GNV+DP  +IE  G DA R F++      K+  +   G++  
Sbjct: 577 LLTQGMVLKDGGKMSKSKGNVVDPNSMIERYGADATRLFILFASPPIKELEWSDQGIE-- 634

Query: 350 VNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESIL------SVCSRVLQE 400
                  G    +SR   ++ +  D    + PT  A  +SD +            RV ++
Sbjct: 635 -------GAFRFLSRLWRLVEELEDRLHAVRPTSHAAPKSDAARQLRFKEHDTVRRVTRD 687

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           I    Q    + A+A V+ LV+E+    D     EL  T P   ++ +   V        
Sbjct: 688 IENEFQ---FNTAIAAVMELVNEMYALKD-----ELADTEPKALASAIATAV-------T 732

Query: 461 LLQAFVPKLANKIFDIL 477
           LL    P L  +++  +
Sbjct: 733 LLSPVAPHLCEELWQTM 749


>gi|78222176|ref|YP_383923.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193431|gb|ABB31198.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 887

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 49/351 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222
           ++ ++    ++ L+  +     I+P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 363 WYVKVGPLAEEALAAVKDGRTRIVPQQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWY 420

Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                       DP                ++  W  +     +T G+ D     K  F+
Sbjct: 421 CDHCGETTVAKVDPTKCSKCGSDEIRQETDVLDTWFSSALWPFSTLGWPDQTSELKT-FY 479

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSLGNV 310
           P    V G DIL F    W A ++   L     +P + V+ H  +   +G+K+SKS GNV
Sbjct: 480 PTSCLVTGFDILFF----WVARMMMMGLHFMGEVPFRDVYIHALVRDAQGQKMSKSKGNV 535

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ VI++ G DA R+ L    A G+D    ++ +    N   AN I N  SR   M L
Sbjct: 536 IDPLVVIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFALMNL 592

Query: 371 K--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
           +  D D + P    F+ +D  IL   +    +++E ++    + A   +     SE  D 
Sbjct: 593 EGFDPDAVDPAGLEFSNADRWILYRFNAAAADVQEALEAYRYNDAATALYRFTWSEFCDW 652

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K  +L + +  R  T  YV   V+  L  LL  F+P +  +I+  L
Sbjct: 653 YIELVKD-DLYRGDETRQRTARYVLWLVLEHLLRLLHPFMPFITEEIWQAL 702



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + DVL R+ R+ G +VL+  GTD  G
Sbjct: 41 SIVIPPPNVTGALHMGHALNNTLQDVLCRWKRMSGHNVLWMPGTDHAG 88


>gi|161751096|ref|NP_376312.2| isoleucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|84029571|sp|Q975H9|SYI_SULTO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1047

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 31/280 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +  VW D+   +  + G   + +    +  P DL + G D LR  F ++   
Sbjct: 515 RVPD----VADVWFDSGVAFFASLG--KDWEKKWKEIGPVDLVLEGHDQLRGWFFSLLRA 568

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI--EEVGVDALRYFLVREI 333
             +L    P    V  HGF+L  +G ++ KSLGN ++P +V   E+ G D LR +L+R  
Sbjct: 569 GVILLDRAPY-NAVLVHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGRDVLRLWLLRNT 627

Query: 334 ACGKDGFYDK--DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTE----S 386
                 F  K  D  K+ +N      I N+ V  S  M L ++D  I       +     
Sbjct: 628 TWEDAKFSWKALDQTKRDLNI-----IWNVYVFASTYMNLDNFDPRIYNLDNLKQYLRIE 682

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPD 442
           D  +LS  +RV++E++E+M +  +H    ++ S ++ ++ R++     ++ W  +  +PD
Sbjct: 683 DLWLLSRYNRVVKEVKESMNDFKVHELANKMTSFIIDDISRFYLRLVRKRAWN-ESNDPD 741

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + + YV  EV++   +LL   +P    +I+   FV D+
Sbjct: 742 KIA-MYYVLYEVLKGSLVLLSPVIPFTTERIYQD-FVVDK 779



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 25/150 (16%)

Query: 15  YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------------QKIAK 60
           YP++  PHIG  +  +I D + R+ RL G       G D HG             QK + 
Sbjct: 46  YPSSPIPHIGTVWNKVIKDCILRYERLAGFRTYDQPGYDTHGLPIEVAIEKQLGIQKKSD 105

Query: 61  AAQNAGV-----TTKVFVDQNSR----NFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
             +  GV       K F   N+     NF+++   +D  +++   T    +     +L K
Sbjct: 106 IIEKIGVDNFVNKCKEFALNNASSLTANFKNIGIFMD--WNNPYMTLHNDYISNSWMLIK 163

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           K  ++G +YKG +   +  R E    D EV
Sbjct: 164 KAYERGLLYKGVHVLHWCPRCETTLADYEV 193


>gi|319404436|emb|CBI78039.1| Valyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 907

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 23/271 (8%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPA----- 277
           Q ++  W  +     +T G+   PD +     F+P  L V G DI+ F    W A     
Sbjct: 476 QDVLDTWFSSALWPFSTLGW---PDKTIELTTFYPTSLSVTGFDIIFF----WVARMMMM 528

Query: 278 -FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P P  V+ H  +  + G K+SKS GN++DP+E+I++ G DALR+ L   +A 
Sbjct: 529 GMHFMGEVPFPT-VYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMVAQ 587

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   D   ++   N      + N  +R   M    +D            +  IL+  S
Sbjct: 588 GRDVKLDPSRVEGYRN--FVTKLWN-ATRFAEMNGVRHDLAFKPEKTKLAINRWILTELS 644

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + +  + + ++N   + A   +   V  +  D Y +  KP   + +N D        T  
Sbjct: 645 KTVLAVTKGIENYKFNDAAHALYRFVWNALCDWYLELLKP-VFQGSNEDSKKEAQACTAW 703

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENR 484
           V+ ++  LL  F+P +  +++ +  + D  R
Sbjct: 704 VLDEVYKLLHPFMPHVTEELWSLTAMQDMKR 734



 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D++ RF R+ G +VL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNTTIQDIMVRFQRMQGKNVLWQPGMD-----------HAGIATQMVVERQLAER 100

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           R++    ++  + FI    K  H+   I+  ++   G
Sbjct: 101 RELTR-QEMGREKFIECVWKWRHEAGGIITNQLKRLG 136


>gi|228958483|ref|ZP_04120203.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801110|gb|EEM48007.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 1033

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|145592190|ref|YP_001154192.1| isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283958|gb|ABP51540.1| Isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 980

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 34/269 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHVIGKDILR--FHAIYWPAF 278
           Y+M VW+D+   +L         DG +      K +P D    G D  R  F+++   + 
Sbjct: 527 YVMDVWLDSGVAWLAAV------DGERNRELWGKLFPYDFVTEGIDQTRGWFYSLLATSV 580

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L +   P  K V   G IL K G+K+SKS GNV+   ++ E+ G D +R +++ + A  +
Sbjct: 581 LYTGRAPY-KTVLIQGLILDKHGQKMSKSKGNVVWAKDLFEKYGADPVRLYILSKAAPWE 639

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDG----MIPTPGAFTESDESIL 391
           D  +D D + + V ADL  GI   V+R     M L  +D     +    G   E D  +L
Sbjct: 640 DLSFDPDEV-RHVLADL--GILWNVARFADTYMSLDGFDAERYPLEEWLGRGLEEDRWVL 696

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQ----VISLVSEVDRYFDAQKPWELKKTNPDR--AS 445
           S  + ++ E    ++N   H+A+A     V+  +S        ++ W  + T PD+  A 
Sbjct: 697 SELNSLVAEFASYLKNFEFHKAVAMWRDFVVETLSHRYLRLLRRRVWSDEPT-PDKYAAY 755

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            VL+    VI+ + IL   F P +A  ++
Sbjct: 756 AVLH---HVIKTVLILASVFTPFVAEYLW 781



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          N  PH+GH       DV+ RFHRL G DV    G D  G  +
Sbjct: 53 NGMPHVGHIRGRTYKDVVLRFHRLLGYDVWVQGGWDMQGMPV 94


>gi|256395449|ref|YP_003117013.1| methionine--tRNA ligase [Catenulispora acidiphila DSM 44928]
 gi|256361675|gb|ACU75172.1| Methionine--tRNA ligase [Catenulispora acidiphila DSM 44928]
          Length = 662

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 96/471 (20%), Positives = 171/471 (36%), Gaps = 47/471 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ER +   ST    PN   H+GH +   + ADV  R+ RL G      TG+D++   + 
Sbjct: 118 LTERPQFVFSTPPT-PNGDLHLGHLSGPYLGADVYVRYQRLLGNRAWHLTGSDDYQSYVT 176

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF-IRTTEKRHHDTCRILWKKISDKGD 118
             A   GVT        S         +DI  D++ + +  + + +  +  + ++ D G 
Sbjct: 177 AVAAKDGVTPAEAAAHYSAEIAATLKAMDIDVDEYYVTSVAEGYPEGLQGYFSRLVDSGH 236

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN----------------PVQWM-- 160
           +        +      Y  +  V       +  A  N                PV  +  
Sbjct: 237 VSPASTPALFDAETHEYLYEVNVGGSCPACFSPAGGNICEECGEPNLVADLVDPVSGISG 296

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E Y   L  + D +  +   H    +PI  R            DL +S  + 
Sbjct: 297 TAPKQADAERYTLPLHEFADIVADH---HRRGRVPIRLRELAQRVFAHERLDLPVSHPS- 352

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIG 264
            WG++  +D     +++VW +    +L     L    G   + W +         +H  G
Sbjct: 353 GWGVQPAEDDLDGQVIWVWPEMSYGFLHGIERLGAELG---ELWSSREPSRDWKIVHFFG 409

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D   +H+I +P     A+      +  H   F L +G+K S S  + I   E++    V
Sbjct: 410 YDNSFYHSILYPVLYRLAHPEWNPDIDYHVNEFYLLEGQKFSTSRRHAIWGKEILNPGTV 469

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DA+RY+L      G+   + +    +     L  G    +    + +   + G +P  G 
Sbjct: 470 DAVRYYLSSTRPEGERTDFRRAEFDRACAETLVGGWEQWLHDLGARLDAGFGGTVPDAGT 529

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIH-RALAQVISLVSEVDRYFDAQK 432
           +T    + L+  S  L EI   +  +    R+ AQV+  +    R F  Q+
Sbjct: 530 WTSEQTAFLARLSLRLDEITAALNPEGFSLRSAAQVLDAIVGDARAFSRQQ 580


>gi|77414609|ref|ZP_00790750.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159348|gb|EAO70518.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 883

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|114561888|ref|YP_749401.1| leucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114333181|gb|ABI70563.1| leucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 872

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 18/257 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 39  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + ++  KG +
Sbjct: 99  AINNKASPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTQLYAKGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   S  +   DE    +++V    DG  +      +Q  E   +F +++ Y ++LL+ 
Sbjct: 159 YKKTSSVNWCPNDETVLANEQV---QDGCCWRCDTEVIQ-KEIPQWFIKITDYAEELLND 214

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               +  PE +  ++R    R+E I    +    ++ S  +FD     PD    + YV I
Sbjct: 215 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFA----VADSDASFDIYTTRPDTLMGVTYVAI 270

Query: 233 DALTNYLTTTGYLDNPD 249
            A  + L      +NP+
Sbjct: 271 -AAGHPLAEQSAQNNPE 286


>gi|319744516|gb|EFV96871.1| valine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 883

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T +       R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERF--TLDDGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  + +KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|170290812|ref|YP_001737628.1| isoleucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174892|gb|ACB07945.1| isoleucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 982

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 23/265 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    IM VW D+  ++  + GY    D S  + +P D    G D +R  F ++   
Sbjct: 519 RIPD----IMDVWYDSGISFFASLGYPYKTD-SLNEIFPVDFITEGHDQVRGWFFSLLRM 573

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             LL    P  + V  HGF+L  KG ++ K LGN + P E+++  G D  R F++ ++  
Sbjct: 574 GVLLFGRAPY-RSVLMHGFMLDEKGREMHKRLGNYVPPQEIVKRFGRDCFRAFVLTKVPW 632

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI----LKDYDGMIPTPGAFTES-DESI 390
            +D  +   G+++ V+  L N I N+   + + I    +KD D     P    +  ++ +
Sbjct: 633 -QDLRFSWKGMEE-VSRKL-NIIWNVYVFATTYIGDRDIKDLD-----PSDVRDPINKWL 684

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +S  +  ++  RE M+   +H A  ++I+ LV +V   +      +++  +   +S  + 
Sbjct: 685 ISRLNTTMKNFREAMEEYNLHVASNEIINFLVEDVSHLYLRVSRKKIRSKDEATSSEWIS 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V   V+R     L    P LA KI+
Sbjct: 745 VLYYVLRNAIPYLSVVTPFLAEKIY 769



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 24/159 (15%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K +      YP++  PH G  +  ++ D + RF R +G  VL   G D HG  I    +
Sbjct: 41  KKFHFLDGPPYPSSDTPHPGTVWNKVVKDAVVRFKRGEGYFVLDKPGWDTHGLPIEVMTE 100

Query: 64  NA-GVTTK---------VFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102
            A G ++K          FV+Q            +R+F++    LD S   ++ T E+ +
Sbjct: 101 RALGFSSKKDIETFGIAKFVEQCRELAARNIESMTRHFKEFGVSLDWS-SPYV-TYEREY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++     K+I + G +Y+G     +  R E   +D EV
Sbjct: 159 IESAWWGIKRIWENGMLYQGERPVHWCPRCETVLSDYEV 197


>gi|119489561|ref|ZP_01622321.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119454473|gb|EAW35621.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 912

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 19/303 (6%)

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           FV +  +  ++ + T  +G  +K+  +P  ++  W  +     +T G+        A ++
Sbjct: 437 FVVAKTEAEAVKKATEKFGKDVKLQQEPD-VLDTWFSSGLWPFSTLGW-PQETADLATYF 494

Query: 257 PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P +    G DI+ F    +   A      +P  K V+ HG IL   G+K+SK+ GN IDP
Sbjct: 495 PTNTLSTGFDIIFFWVARMTMMAGYFMDKMPF-KTVYIHGLILDENGKKMSKTAGNGIDP 553

Query: 314 IEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILK 371
           + +I + G DA+RY L++E I  G+D   + +  K +  + + +    N +  +   ++ 
Sbjct: 554 LLLINKYGTDAVRYTLIKEVIGAGQDIRLEYNREKDESASVEASRNFTNKIWNASRFVMM 613

Query: 372 DYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
           + +G  P      +S      D+ ILS   + +++  E +++  +  A  +    +    
Sbjct: 614 NLEGKTPQQLGKPDSEKLELCDQWILSRFHKTVKQTCEYLESYGLGEAAREQYEFIWGDF 673

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  KP  L+  N +           V+  +  LL  F+P +  +I+  L    E 
Sbjct: 674 CDWYIELVKP-RLQGENTESKLVAQQTLAYVLEGIMKLLHPFMPHITEEIWHTLTQTGEE 732

Query: 484 RCF 486
            C 
Sbjct: 733 TCL 735



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+   + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFNNSLIDTLIRYHRMKGDNTLYLPGTD 87


>gi|70607182|ref|YP_256052.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|90108444|sp|Q4J8X1|SYV_SULAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68567830|gb|AAY80759.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 831

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW+D+    L  TG+ D  D S+  K +P+ L + G DI+R      Y+    L+ N+P 
Sbjct: 491 VWVDSSVTVLYLTGFYD--DKSRFTKTFPSSLRLQGTDIIRTWLFYTYYRTLALAGNIPF 548

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K+V  +G +L   G ++SKS GNV+ P++ ++E G DA+R  L+ +   G D  +  D 
Sbjct: 549 -KEVLINGQVLGPDGTRMSKSKGNVVSPLDKVDEYGADAIRLTLL-DAKIGDDFPFKWDT 606

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +K +          N    S   I K     I  P    E D+ IL    + +Q+  E  
Sbjct: 607 VKSKKLLLQKL--WNAGRLSYPFIGKK---KINKPSKLHEIDKWILQEHKKFVQQSIEAY 661

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N   +  +  + S   E   D Y +      +K        + +Y    +I+ L ILL 
Sbjct: 662 RNYDFYIVVESIYSYFWETIADEYLEL-----IKHRLFMEDESAIYTLSRIIKDLLILLY 716

Query: 464 AFVPKLANKIFDILF 478
              P +  ++++ L+
Sbjct: 717 PIAPHITEEMYERLY 731



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           I T   + + + H+GHAY + I+D + RF RL+G +VL   G D  G
Sbjct: 72  IDTPPPFTSGELHMGHAYWVTISDTIGRFKRLEGYNVLLPQGWDTQG 118


>gi|283770729|ref|ZP_06343621.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460876|gb|EFC07966.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 876

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|30350185|gb|AAP31493.1| putative valyl-tRNA synthetase [Western X phytoplasma]
          Length = 860

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 14/152 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA--FLL 280
           DP  ++  W  +    L T G+ +N      + +P D  V G DIL F    W +   L 
Sbjct: 431 DPD-VLDTWFSSALWPLCTLGWPNNNVELFQRRFPVDTLVTGYDILTF----WVSKMALQ 485

Query: 281 SANL--PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           S NL   +P K V  HG I   +G K+SKS GN +DPI++I++ G DALR+FL    + G
Sbjct: 486 SMNLIEKIPFKDVLLHGLIRDSQGHKMSKSKGNGVDPIDIIDKYGTDALRWFLTTNSSPG 545

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            D  Y++  +    N    N I N +SR + +
Sbjct: 546 ADLLYNETKIASSWN--FINKIWN-ISRFIKL 574



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 11/78 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           +K   +  I  PN   + H+GHA+   + D++ R  ++ G DVLF  G D  G     KI
Sbjct: 31  DKTPFTIVIPPPNITGKLHLGHAWNNTLQDIIIRRKKMLGFDVLFLPGMDHAGIATQSKI 90

Query: 59  AKAAQNAGVTTKVFVDQN 76
            +  +  G     F +QN
Sbjct: 91  KQKLKEEG-----FAEQN 103


>gi|116627368|ref|YP_819987.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100645|gb|ABJ65791.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 883

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        + ++    +    A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 618

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++ EN        A   + + + +   D Y +  K   L   N D       V + 
Sbjct: 619 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 677

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  LL   +P +  +IF
Sbjct: 678 TLDQILRLLHPIMPFVTEEIF 698



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205


>gi|26553494|ref|NP_757428.1| valyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26453500|dbj|BAC43832.1| valyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 872

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 52/352 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+ M  E +F ++S Y  K++   +S  +    PI+    +I+++ + L D  +SR+ + 
Sbjct: 361 VEPMMSEQWFVKVSEYSKKVIELQKSSKKIQFFPIKFEKNLINWM-TNLNDWCISRQLW- 418

Query: 216 WGIKIP----DDPQYI-----------MYV--------WIDALTNYLTTTGYLDNPDGSK 252
           WG +IP     D + I           +YV        W  +    +TTT  L + D   
Sbjct: 419 WGHQIPVWYKKDSKEIYVGTKPPKNEELYVRDNDVLDTWFSSGLWPITTTDALKSKDA-- 476

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKS 306
              +P ++ V G DI+ F    W   ++  +L L K+V F H +I          K+SKS
Sbjct: 477 --LFPTNVLVTGFDIIFF----WVFRMMFFSLYLKKEVPFKHCYITGLIRDEHNNKMSKS 530

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP +VIE+ G DALR FL+   + G+D  Y ++ +K        N + N   R V
Sbjct: 531 LGNGVDPNDVIEKYGADALRLFLLSSSSPGEDLCYVEEKVKSC--WGFINKLWNSF-RYV 587

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M   D++     TP    + D+ IL+  ++   E  +         ++ +++    +  
Sbjct: 588 EMNSSDFNFDEDKTPKNLEDFDKWILNKFNKAYSEFLQQFNKYNFLVSIKKILDFTWDDF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + Y       EL K       + L+V   +I+++ IL     P + + ++D
Sbjct: 648 CNTYI------ELSKNRTSNQESKLWVLNYLIKKILILFHPMCPFVTSNLYD 693


>gi|315105531|gb|EFT77507.1| leucyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 826

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W  + D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCPI-DQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  + +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVAAEVTSDPDADL------TQGDSALRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|261602393|gb|ACX91996.1| isoleucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 1053

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 35/288 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    +  VW D+   +  + G   +      +  P DL + G D LR  F ++   
Sbjct: 522 RIPD----VADVWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRGWFFSLLRS 575

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +L    P    V  HGF+L  +G ++ KSLGN ++P  V+E+ G D LR +L+R    
Sbjct: 576 GLILLDRAPYTS-VLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 634

Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------- 385
               F +    L KR   DL       V  S+ M L +++     P  +T          
Sbjct: 635 EDAKFSWKALELTKR---DLQIIWNTFVFASMYMNLDNFE-----PDKYTLDDIIKYAKI 686

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNP 441
            D  ILS  + +L+++ E+M++  +H     +I+ L+ +V R++     ++ W   + N 
Sbjct: 687 EDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW--IEANT 744

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
                + Y+   +++Q  IL    +P ++ KI+    V A E+   +S
Sbjct: 745 QDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 792



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 2   KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K REK        YP++  PHIG  +  +I D + R+ R+ G  V    G D HG  I  
Sbjct: 40  KRREKFLFIDGPPYPSSPTPHIGTIWNKVIKDCILRYQRVLGKRVHDQPGYDTHGLPIEV 99

Query: 61  AAQN-AGVTTK 70
           A +   G++ K
Sbjct: 100 ATEKLLGISNK 110


>gi|259418508|ref|ZP_05742426.1| valyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345903|gb|EEW57747.1| valyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 1047

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 17/129 (13%)

Query: 212 KTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDI 267
           ++F+  +++P   DP  ++  W    ++ L   G L  P+ ++  +K++P    V G+DI
Sbjct: 589 RSFEGPMQVPMFRDPD-VLDTW---FSSGLWPIGTLGWPEWTEETSKYFPTSTLVTGQDI 644

Query: 268 LRF---HAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           L F     +     +L+ NLP+ ++     V+ HG +   KG+K+SKS GNV+DP+E+IE
Sbjct: 645 LFFWVARMMMMQLAVLNENLPVQERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIE 704

Query: 319 EVGVDALRY 327
           E G DALR+
Sbjct: 705 EYGADALRF 713



 Score = 40.0 bits (92), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 72  HMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVER 115


>gi|217034230|ref|ZP_03439648.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10]
 gi|216943290|gb|EEC22752.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10]
          Length = 872

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 255 FWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+P    + G DIL F  +   + +  L   LP  K ++ H  +   KGEK+SKS GNVI
Sbjct: 482 FYPNTTLITGFDILFFWVVRMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSKGNVI 540

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           DP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 541 DPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|49483906|ref|YP_041130.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|81650951|sp|Q6GG42|SYV_STAAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49242035|emb|CAG40734.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
          Length = 876

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|323440792|gb|EGA98501.1| valyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442947|gb|EGB00570.1| valyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 876

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|315641872|ref|ZP_07896864.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482440|gb|EFU72980.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 807

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 32  QKPKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRSQGYNVLHPMGWDAFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 92  ALDTGNDPAEFTKKNIETFRHQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 151

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 152 YEAEVAVNWVPELGTVIANEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 205

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 206 EDLEEVDWPESIKEMQR 222



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 51/242 (21%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILH-KGE 301
           G   ++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    E
Sbjct: 519 GKLTRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGGNNE 578

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLA 355
           K+SKS GNV++P +V+ + G D LR +      L   IA  ++G        +RV   + 
Sbjct: 579 KMSKSRGNVVNPDDVVTQYGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLERVWRLIV 638

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +  G L  R  ++                 +D S+  V ++ ++++ E+      + A++
Sbjct: 639 DEEGKLRDRITTI-----------------NDGSLTKVYNQTVKKVTEDYNQLHFNTAIS 681

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  V+E                   +A ++ Y  VE   Q   LL    P ++ ++++
Sbjct: 682 QMMVFVNEA-----------------YKAESLCYEYVEGFVQ---LLAPIAPHISEELWE 721

Query: 476 IL 477
           +L
Sbjct: 722 VL 723


>gi|292490669|ref|YP_003526108.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579264|gb|ADE13721.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 819

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMGGKNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  QN    R     L  +YD    + T    ++   + L+ K+ DKG +YK
Sbjct: 92  QNRVPPDQWTYQNIDYMRGQLKRLGFAYDWSRELATCHPAYYHWEQWLFTKLFDKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY ++LL+
Sbjct: 152 KTALVNWDPVDQTVLANEQV---VDGRGWRS-GAVVERREIPQWFLKITAYAEELLT 204



 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +  +W P D ++ G +    H +Y   F        L+  + P    + + G +L  G K
Sbjct: 518 RGHYWLPVDQYIGGIEHAVLHLLYARFFHKVMRDMGLVRGDEPF-THLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP  +IE+ G D  R F++
Sbjct: 577 MSKSKGNTVDPQALIEQYGADTARLFIM 604


>gi|258424081|ref|ZP_05686963.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845702|gb|EEV69734.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 876

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|228965178|ref|ZP_04126272.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794412|gb|EEM41924.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 1033

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYNVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKNEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|55738435|gb|AAV62076.1| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 901

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 461 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 521 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 579

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        + ++    +    A   +D  IL   +
Sbjct: 580 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAKVAAGQAGNVTDRWILHNLN 636

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++ EN        A   + + + +   D Y +  K   L   N D       V + 
Sbjct: 637 ETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSVLLY 695

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  LL   +P +  +IF
Sbjct: 696 TLDQILRLLHPIMPFVTEEIF 716



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 58  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 117

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 118 ESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 176 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 223


>gi|15897625|ref|NP_342230.1| isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus P2]
 gi|74566731|sp|Q9UXB1|SYI_SULSO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|6015754|emb|CAB57581.1| isoleucyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813890|gb|AAK41020.1| Isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus P2]
          Length = 986

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 35/288 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    +  VW D+   +  + G   +      +  P DL + G D LR  F ++   
Sbjct: 455 RIPD----VADVWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRGWFFSLLRS 508

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +L    P    V  HGF+L  +G ++ KSLGN ++P  V+E+ G D LR +L+R    
Sbjct: 509 GLILLDRAPYTS-VLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 567

Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------- 385
               F +    L KR   DL       V  S+ M L +++     P  +T          
Sbjct: 568 EDAKFSWKALELTKR---DLQIIWNTFVFASMYMNLDNFE-----PDKYTLDDIIKYAKI 619

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNP 441
            D  ILS  + +L+++ E+M++  +H     +I+ L+ +V R++     ++ W   + N 
Sbjct: 620 EDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW--IEANT 677

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
                + Y+   +++Q  IL    +P ++ KI+    V A E+   +S
Sbjct: 678 QDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 725


>gi|257425780|ref|ZP_05602204.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428446|ref|ZP_05604844.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431080|ref|ZP_05607457.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433763|ref|ZP_05610121.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436679|ref|ZP_05612723.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282904236|ref|ZP_06312124.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906061|ref|ZP_06313916.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908976|ref|ZP_06316794.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282914461|ref|ZP_06322247.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919430|ref|ZP_06327165.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924807|ref|ZP_06332473.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958416|ref|ZP_06375867.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503539|ref|ZP_06667386.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510553|ref|ZP_06669258.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537096|ref|ZP_06671776.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428236|ref|ZP_06820865.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590801|ref|ZP_06949439.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|257271474|gb|EEV03620.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275287|gb|EEV06774.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278028|gb|EEV08676.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281856|gb|EEV11993.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284030|gb|EEV14153.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313173|gb|EFB43569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317240|gb|EFB47614.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321642|gb|EFB51967.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282327240|gb|EFB57535.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331353|gb|EFB60867.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595854|gb|EFC00818.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790565|gb|EFC29382.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919941|gb|EFD97009.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095205|gb|EFE25470.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466444|gb|EFF08965.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295127636|gb|EFG57273.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575687|gb|EFH94403.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|315195567|gb|EFU25954.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 876

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|323127776|gb|ADX25073.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 882

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|282911292|ref|ZP_06319094.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324987|gb|EFB55297.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312437877|gb|ADQ76948.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 876

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            K+       G+T     D     F + A      Y  FIR
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIR 127


>gi|242003968|ref|XP_002422927.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212505820|gb|EEB10189.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 841

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+ +   YP+   H+GH     I+DVLARF R+ G +V+   G D  G     AA
Sbjct: 62  DKEKFYVLSMFPYPSGSLHMGHVRVYSISDVLARFFRMRGKNVIHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G+    +  QN  N + + + L  S+D   +F  T +  ++   + L+ K+ ++G +
Sbjct: 122 FEKGINPDEWTQQNIANMKSVMEKLCFSFDWSREFA-TCDSDYYKWTQFLFLKLYERGLV 180

Query: 120 YK 121
           Y+
Sbjct: 181 YR 182


>gi|289547884|ref|YP_003472872.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181501|gb|ADC88745.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 604

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK+Y+     YP+ + H+GH     I D +ARF R+ G  VL   G D  G     AA  
Sbjct: 30  EKVYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLRMRGKAVLHPMGWDAFGLPAENAAIK 89

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +   N    RD    L  SY  D  I T +  ++   + ++ K  +KG  Y+ 
Sbjct: 90  HGVHPAQWTKSNISYMRDQLRRLGFSYDWDREIATCDPEYYRWNQWIFLKFLEKGLAYRK 149

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                Y   DE    +++V +G   +       P+   +   ++ R++ Y ++LL 
Sbjct: 150 EAEVNYCPNDETVLANEQVIEGRCWRC----GTPIVRKKVPSWYLRITQYAERLLE 201


>gi|50842379|ref|YP_055606.1| leucyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|282854163|ref|ZP_06263500.1| leucine--tRNA ligase [Propionibacterium acnes J139]
 gi|50839981|gb|AAT82648.1| leucyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|282583616|gb|EFB88996.1| leucine--tRNA ligase [Propionibacterium acnes J139]
 gi|314966913|gb|EFT11012.1| leucyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981254|gb|EFT25348.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091823|gb|EFT63799.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315093169|gb|EFT65145.1| leucyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103326|gb|EFT75302.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327734|gb|EGE69510.1| leucine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 826

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W  + D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCPI-DQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  + +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVAAEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|159468872|ref|XP_001692598.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158278311|gb|EDP04076.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 962

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 11/155 (7%)

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           +E R+E     +S  +   L+      G+ +  + + ++  W  +     +T G+ +   
Sbjct: 500 LEGRSEHYVVARSAEEAQRLAEAKHGAGVVLKQE-EDVLDTWFSSGLWPFSTLGWPNTQA 558

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKI 303
               KF+P  +   G DIL F    W A ++   +    K     V+ HG +   KG K+
Sbjct: 559 PDFQKFYPTQVLETGHDILFF----WVARMIMMGIEFTGKAPFNTVYLHGLVRDEKGRKM 614

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           SKSLGNVIDP++ I + G DALR+ L    A G+D
Sbjct: 615 SKSLGNVIDPLDTIGQYGTDALRFTLATGTAVGQD 649


>gi|148927961|ref|ZP_01811363.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886691|gb|EDK72259.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 753

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 53/332 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +Q + ++ +F  +    +K     E+      P   +  ++ ++ + L+D +LSR+   W
Sbjct: 427 IQPLMKDQWFLSMRPLVEKAKKVIEAGDIQFTPSNSKRVLLQYLDN-LRDWNLSRQ-IPW 484

Query: 217 GIKIP-----DDPQYIMY------------------------VWIDALTNYLTTTGYLDN 247
           GI IP     D+P   ++                         W  +      TT YL+ 
Sbjct: 485 GIPIPAFQNIDNPDDWIFDSRVDRETIEVGGYTYKREEDTFDTWFSSGQWPFITTDYLEG 544

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GE 301
             G  +KF+P D+   G D+L      W A ++   L +      K V+ HG +L + G+
Sbjct: 545 --GELSKFYPTDMMETGHDLLD----RWVARMIMLGLYMTDKVPFKNVYMHGMVLDEHGQ 598

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P+++I + G DA R  ++   + G++  +     K     + AN + N+
Sbjct: 599 KMSKSKGNVINPMDIINKYGSDAFRLGIIASRSAGQNQAFST--TKVVAGRNFANKLWNI 656

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                  + + +    P P   T +D  I+   +   +EI   + +     A   V   +
Sbjct: 657 ARFIEDRVGEKFKNRAPEPQ--TIADHWIIRELNTASEEIDRLLSDYRFAEATEVVYHTI 714

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +   D Y +A K    ++ NP      L  T
Sbjct: 715 WDNVADWYVEASK----RQNNPGMLGGWLVAT 742



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           S  +  PNA    HIGH     + D+L R+HR+ G D ++  G D  G
Sbjct: 113 SIVMPPPNANGNLHIGHGLTFNLQDILIRYHRMKGFDTIYIPGADHAG 160


>gi|323136665|ref|ZP_08071746.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397982|gb|EFY00503.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 905

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 25/262 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+ D  P+ S+  F+P ++ V G DI+     +W A ++   L 
Sbjct: 477 VLDTWFSSALWPFSTLGWPDETPELSR--FYPTNVLVTGFDII----FFWVARMMMMGLH 530

Query: 286 LPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             K+     V+ H  +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D 
Sbjct: 531 FKKEIPFKDVYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTLAAMAAQGRDI 590

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVL 398
                 ++   N   A  + N  SR   M      D   P     T  +  I+   +R +
Sbjct: 591 KLSTQRVEGYRN--FATKLWN-ASRFAEMNGCARVDSYDPRANKVT-LNRWIVGEAARTV 646

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST--VLYVTVEV 454
           +E+   +     + A       V  V  D Y +  KP     T PD A        T  V
Sbjct: 647 REVSAAIDAYRFNEAAGAAYRFVWNVFCDWYVELTKP---LLTGPDGAEKDETRATTAFV 703

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           + Q+  LL  F+P +  +++ I
Sbjct: 704 LDQIYALLHPFMPFITEELWAI 725



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+L R+HR+ G DVL+  GTD           +AG+
Sbjct: 40 SIVIPPPNVTGSLHMGHALNNTLQDILVRYHRMKGEDVLWQPGTD-----------HAGI 88

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 89 ATQMVVERQ 97


>gi|228955959|ref|ZP_04117895.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228803739|gb|EEM50422.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 1033

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  V+   G D HG
Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88


>gi|229109652|ref|ZP_04239238.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228673693|gb|EEL28951.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
          Length = 1033

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVRLTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  VL   G D HG
Sbjct: 50 NGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHG 88


>gi|7672209|emb|CAB89523.1| unnamed protein product [Pediococcus acidilactici]
          Length = 56

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 34/54 (62%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH 54
          M E    YI+T I YP+ + HIG++Y  I  D  ARF RL G DV F TGTDEH
Sbjct: 2  MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEH 55


>gi|15621426|dbj|BAB65421.1| 907aa long hypothetical isoleucyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 907

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 31/280 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +  VW D+   +  + G   + +    +  P DL + G D LR  F ++   
Sbjct: 375 RVPD----VADVWFDSGVAFFASLG--KDWEKKWKEIGPVDLVLEGHDQLRGWFFSLLRA 428

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI--EEVGVDALRYFLVREI 333
             +L    P    V  HGF+L  +G ++ KSLGN ++P +V   E+ G D LR +L+R  
Sbjct: 429 GVILLDRAPY-NAVLVHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGRDVLRLWLLRNT 487

Query: 334 ACGKDGFYDK--DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTE----S 386
                 F  K  D  K+ +N      I N+ V  S  M L ++D  I       +     
Sbjct: 488 TWEDAKFSWKALDQTKRDLNI-----IWNVYVFASTYMNLDNFDPRIYNLDNLKQYLRIE 542

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPD 442
           D  +LS  +RV++E++E+M +  +H    ++ S ++ ++ R++     ++ W  +  +PD
Sbjct: 543 DLWLLSRYNRVVKEVKESMNDFKVHELANKMTSFIIDDISRFYLRLVRKRAWN-ESNDPD 601

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + + YV  EV++   +LL   +P    +I+   FV D+
Sbjct: 602 KIA-MYYVLYEVLKGSLVLLSPVIPFTTERIYQD-FVVDK 639


>gi|314923144|gb|EFS86975.1| leucyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 826

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W  + D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCPI-DQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  + +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVAAEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|291287148|ref|YP_003503964.1| leucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884308|gb|ADD68008.1| leucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 850

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 8/184 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV++R+  + GL+VL   G D  G     AA 
Sbjct: 30  KEKFYCLEMFPYPSGKIHMGHVRNYAIGDVISRYKFMQGLNVLHPIGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                  V+  QN    +     L ++Y  D  I T +  ++   + ++ ++ +KG IY 
Sbjct: 90  ENSTHPAVWTKQNISYMKQQLKKLGLAYDWDREIATCDPEYYKWEQKIFIEMWEKGLIYK 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  +  W    +    N+    +  DG  +    N V   E +G++ +++ Y D+LL Y 
Sbjct: 150 KKSHLNWCDDCNTVLANE----QVEDGACWRC-GNEVAIKELDGWYLKITDYADELLEYT 204

Query: 181 ESHP 184
           +  P
Sbjct: 205 DKLP 208


>gi|47570085|ref|ZP_00240744.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553246|gb|EAL11638.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 1033

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKQTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFAPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|310642970|ref|YP_003947728.1| isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
 gi|309247920|gb|ADO57487.1| Isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
          Length = 1029

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 18/259 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + +L+  
Sbjct: 512 VIDVWFDSGSMPFAQHHYPFENNETFEQQF-PADMICEGIDQTRGWFYSLLAVSTMLTGK 570

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V + G +L  +G+K+SKS GNVIDP EVI+E G DA R+ L+ + A      + 
Sbjct: 571 APY-KAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAFRWALLSDSAPWNSKRFS 629

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVL 398
           K G+     + L + + N  + +   +  D DG  P    F  S    D  ILS  + ++
Sbjct: 630 K-GIVGEAKSKLVDTLVN--THAFLTLYADIDGFDPARYPFKPSAHKLDRWILSRLNSLI 686

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVI 455
             + + +       +   + S V E+  ++      + W    T  D+      +T EV+
Sbjct: 687 LVVDKALSVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGLTE-DKLDAYRTLT-EVL 744

Query: 456 RQLAILLQAFVPKLANKIF 474
              A LL  F P LA  I+
Sbjct: 745 LTTAKLLAPFTPLLAEDIY 763



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N +PHIGH    +I D + R+  + G  V+   G D HG  +    Q   G++ K  +++
Sbjct: 50  NGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELGVQKQLGISHKPEIEE 109


>gi|302333330|gb|ADL23523.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|282916924|ref|ZP_06324682.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319411|gb|EFB49763.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|253734551|ref|ZP_04868716.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253727492|gb|EES96221.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              ++ +  +   + RAL   I      D Y +  K   +   + ++      V    + 
Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDDFCDWYIEMSKI-PMNSNDEEQKQVTRSVLSYTLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +  +L  F+P +  KI+  L
Sbjct: 675 NIMRMLHPFMPFVTEKIWQSL 695



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|329733231|gb|EGG69568.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              ++ +  +   + RAL   I      D Y +  K   +   + ++      V    + 
Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDDFCDWYIEMSKI-PMNSNDEEQKQVTRSVLSYTLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +  +L  F+P +  KI+  L
Sbjct: 675 NIMRMLHPFMPFVTEKIWQSL 695



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|327309987|ref|YP_004336884.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946466|gb|AEA11572.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 940

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 27/151 (17%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K +I+ A  YPN   HIGH    +IAD++AR+HR  GL+VLF  G    G  I   A+
Sbjct: 28  KPKFFITAAYPYPNGAIHIGHGRTYLIADIMARYHRHKGLNVLFPMGFHYTGTPILTVAE 87

Query: 64  NAGVTT-------KVFVDQNSRNFRDMADV-------------------LDISYDDFIRT 97
           +            KV  D      R M D                    L I +     T
Sbjct: 88  SIAAGDVRAMEDFKVIYDVPEEELRKMGDPLYLANYFKELSKQYMKKMGLSIDWTREFTT 147

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYS-GW 127
            +  +    R  +KK+ DKG + KG +  GW
Sbjct: 148 IDPEYQQFIRWQFKKLYDKGLLVKGRHPVGW 178



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 29/227 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    GKD++  H  ++  F  SA  P    P+ + ++G++L +GEK+SKS  NV+
Sbjct: 584 WYPLDWRNSGKDLIPNHLTFF-LFNHSAIFPKELWPRGIVANGWVLVEGEKMSKSKRNVL 642

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +++ G D LR  L   I+   D   D      R  A     I NLV  +     +
Sbjct: 643 ALGKAVDQFGADPLRATLA--ISAEVDQDLDFRANVARSVARHLEEIYNLVVSTAERATR 700

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDA 430
           D +G+   P  +  S+ + L      L++  + + +  I +A   V+  +   ++RY + 
Sbjct: 701 DGEGL---PEMWLRSEAASL------LEKAAKALDDVAIRQAAVYVLYDMRRALERYLEM 751

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +        P RA       +EV++  A+ ++ FVP LA ++++ L
Sbjct: 752 VE-------VPSRA------VLEVLKAWAVAMEPFVPHLAEELWERL 785


>gi|322392565|ref|ZP_08066025.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144557|gb|EFX39958.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 883

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 19/200 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +    N    N I N +SR    IL + +G+         + E   +   +V+++   
Sbjct: 562 EKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVIKKEAG 606

Query: 404 NMQNQLIHRALAQVISLVSE 423
           N+ ++ I   L + I  V+E
Sbjct: 607 NVTDRWILHNLNETIGKVTE 626



 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG 87


>gi|298694934|gb|ADI98156.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|284174950|ref|ZP_06388919.1| isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus 98/2]
          Length = 986

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 35/288 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    +  VW D+   +  + G   +      +  P DL + G D LR  F ++   
Sbjct: 455 RIPD----VADVWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRGWFFSLLRS 508

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +L    P    V  HGF+L  +G ++ KSLGN ++P  V+E+ G D LR +L+R    
Sbjct: 509 GLILLDRAPYTS-VLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 567

Query: 336 GKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------- 385
               F +    L KR   DL       V  S+ M L +++     P  +T          
Sbjct: 568 EDAKFSWKALELTKR---DLQIIWNTFVFASMYMNLDNFE-----PDKYTLDDIIKYAKI 619

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNP 441
            D  ILS  + +L+++ E+M++  +H     +I+ L+ +V R++     ++ W   + N 
Sbjct: 620 EDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW--IEANT 677

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
                + Y+   +++Q  IL    +P ++ KI+    V A E+   +S
Sbjct: 678 QDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 725


>gi|146302874|ref|YP_001190190.1| isoleucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145701124|gb|ABP94266.1| Isoleucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 1066

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 34/281 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +  VW D+   + ++ G   +      +  P DL + G D LR  F ++   
Sbjct: 534 RVPD----VADVWFDSGVAFFSSLG--KDWMSKWKELGPVDLVLEGHDQLRGWFFSLLRS 587

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +L    P  + V  HGF+L  +G ++ KSLGN ++P  VIE+ G D LR  L+R    
Sbjct: 588 GVILDDRAPY-EAVLVHGFMLDEQGREMHKSLGNYVEPSVVIEKYGRDVLRLMLLRNTTW 646

Query: 336 GKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-------D 387
               F +K+  L +R   DL       +  S+ M L   D   PT  +  E+       D
Sbjct: 647 EDVKFSEKNLELSQR---DLQIIWNVFLFTSMYMNL---DNFSPTKMSLEEALKYARVED 700

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDR 443
             I+S    +   + E M++  +H    +++  ++ ++ R++     ++ WE +  + D+
Sbjct: 701 RWIVSRFYNMRSRVSEAMRDYKVHELANELVRFMIEDISRFYLRLVRKRAWE-EGLSQDK 759

Query: 444 AS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
               T+LY    ++R+  I+  A VP  A K++    V D+
Sbjct: 760 LVLYTILYY---IMREWLIMASAVVPYFAEKVYQTFVVNDK 797



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 15  YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-------AQNAG 66
           YP+A  PHIG  +  +I D + R+ RL+G  V    G D HG  I  A       +Q   
Sbjct: 66  YPSAPIPHIGTIWNKVIKDSILRYKRLEGYRVHDQPGYDTHGLPIEVAVERKLNISQKRD 125

Query: 67  VTTKVFVDQNSRNFRDMA 84
           +  K+ V++  +  RD A
Sbjct: 126 IYDKIGVEKFVQLCRDFA 143


>gi|82751253|ref|YP_416994.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123547885|sp|Q2YTA0|SYV_STAAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|82656784|emb|CAI81213.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEKGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|238790771|ref|ZP_04634530.1| Leucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238721129|gb|EEQ12810.1| Leucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 860

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +     PV+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDQTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|330837436|ref|YP_004412077.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329749339|gb|AEC02695.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 884

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 151/353 (42%), Gaps = 55/353 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+    DK L  ++       P    N   S++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WFVRMRGMADKALKAWKDGEVTFYPRRWENTYSSWLEN-IRDWCISRQLW-WGHRIPVWY 419

Query: 222 -------------------------DDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKF 255
                                       + ++  W  +     +T G+  D PD    +F
Sbjct: 420 CEDCGEMIVSRNDVTVCPKCGSSHLRQEEDVLDTWFSSWLWPFSTLGWPEDTPD--LKEF 477

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGN 309
           +P    + G DI+ F    W + ++ A+L    KV     +  G +   +G K+SKSLGN
Sbjct: 478 FPTQTLITGYDIIFF----WVSRMIMASLEFTGKVPFKDVYLTGLVRDRQGRKMSKSLGN 533

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            IDP+EV++  G DA+++ L       +D   D  GL K + +  AN I N  SR + M 
Sbjct: 534 GIDPLEVVDLYGADAMKFTLAHLTVQSQDVLIDM-GLFK-MGSRFANKIWN-ASRFLLMK 590

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           L+    +       +  D+ I +  ++    ++  ++    + A   V         D Y
Sbjct: 591 LEGRTKVSVPETELSIMDKWIYAELNQAAGRVQSTLEGYRFNEASQTVYDFFWNDFCDWY 650

Query: 428 FDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +A K   L+  +P   DRA ++L   ++++ +   LL  F+P +  +I+  L
Sbjct: 651 IEASKH-NLESNDPVVQDRAVSLL---LDILEESLRLLYPFLPFITQEIYSKL 699



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 45/166 (27%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    ++D + R+ R+ G   L+  GTD           +AG+ T+  V++     
Sbjct: 53  HMGHALNNSLSDTIIRYQRMSGRKALWVPGTD-----------HAGIATQNVVERQLA-- 99

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDT---------CRILWK----------------- 111
           ++     D+  + F+  T   +K+HH           C   W+                 
Sbjct: 100 KEGLSRHDLGREKFLERTWQVKKKHHSVIVKQLEKIGCSCDWEHERFTMDEGLSRAVREA 159

Query: 112 --KISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
              + ++G IYKG Y   Y         DDEV YK  +G+ Y   +
Sbjct: 160 FVTLYERGLIYKGKYLINYCPHCGTALADDEVEYKTLEGRLYQVSY 205


>gi|139473421|ref|YP_001128137.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271668|emb|CAM29901.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 882

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|156740388|ref|YP_001430517.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231716|gb|ABU56499.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 907

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 46/278 (16%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           E +F R     +  L+        I+P ER  +V       ++D  +SR+ + WG +IP 
Sbjct: 382 EQWFVRAGPLAELALAAVREGRTRIVP-ERFEKVFFHWLENIQDWCISRQLW-WGHRIPV 439

Query: 222 -------------DDPQY----------IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWP 257
                        DDP            ++  W  +     +T G+ D+ PD    +F+P
Sbjct: 440 WYTPDGQMIVPGPDDPDPQGQGLVQDPDVLDTWFSSALWPFSTLGWPDDTPD--MRRFYP 497

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFILHK-GEKISKSLGNVI 311
             +   G DIL     +W A ++         P    V+ HG +  K G K+SK+ GNV+
Sbjct: 498 TSVMETGYDIL----FFWVARMMMMGCYLTGEPPFHTVYLHGLVRDKDGRKMSKTYGNVV 553

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           +P++VI++ G DALR+ L    + G+D   + + ++   N   AN + N+    +S +  
Sbjct: 554 NPLDVIDQYGADALRFTLATSSSPGQDLNLNPERIESARN--FANKLWNMTRFVLSKL-- 609

Query: 372 DYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQ 406
           D D +      P   T +D  ILS   R+  ++   M+
Sbjct: 610 DDDSLREARRDPQPATLADRWILSRYHRLALDVDRLMR 647



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 25/210 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
            +R    +S        + H+GHA  + I DV+ R+HR+ G   L+  GTD  G     +
Sbjct: 41  SDRPPFVVSMPPPNVTGELHMGHAMFVTIEDVMVRWHRMLGEPTLWLPGTDHAGIATQLQ 100

Query: 58  IAKAAQNAGVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           + +  Q+ G++ +                 +  + +R  R +    D + + F  T +  
Sbjct: 101 VERLLQSEGLSRQQVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWTRERF--TLDPM 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV--Q 158
                R  +K++ D G IY+G     +S   +   +D EV Y+  D   Y+ ++  V   
Sbjct: 159 LSRAVRAAFKRLYDDGLIYRGYRLVNWSPNLQTAVSDLEVEYEERDMYLYHVRYPIVGDS 218

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           W        R +A   + ++   + PE I+
Sbjct: 219 WRPGVWGSGRWAAGATEFITVATTRPETIM 248


>gi|160915954|ref|ZP_02078162.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
 gi|158432430|gb|EDP10719.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
          Length = 874

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 51/347 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDWGIKIP- 221
           +F ++    D++L    +  E I    +R E  +F +    ++D  +SR+ + WG +IP 
Sbjct: 360 WFVKMKPLADEVLQAQGNEEERINFYPKRFEK-TFQQWLENIEDWCISRQLW-WGHRIPA 417

Query: 222 -------------DDPQYI---------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                        ++P+ I         +  W  +     +T G+ +       +++P D
Sbjct: 418 WYHKDSNEIYVGMEEPKDIENWVQDEDVLDTWFSSALWPFSTLGWPEQT-ADLERYFPND 476

Query: 260 LHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           + V G DI+ F    W A +         + P  K V  HG +   +G K+SKSLGN +D
Sbjct: 477 VLVTGYDIIFF----WVARMAFQTRYCMKSRPF-KDVLIHGLVRDSQGRKMSKSLGNGVD 531

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI + GVD+LR+FL      G+D  Y ++  K   +A+  N I N  +R V M  K 
Sbjct: 532 PMDVIAKSGVDSLRFFLTTNSTPGQDLRYSEE--KVEASANFINKIWN-AARFVLMHTK- 587

Query: 373 YDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            + M  +    T +   D+ IL   + VL+ +  NM+         ++ S V +     Y
Sbjct: 588 -EDMCMSDVDLTHASMIDKWILRRFNEVLENVTANMEKYEYALVGNELYSFVWDDFCSWY 646

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K          R ++V    V V+  +  +L  F+P +  +I+
Sbjct: 647 IELSKAGLFSDDETTRHASV-STLVTVLSGILRMLHPFMPFVTEEIY 692



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 16/96 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  + D++AR+ R+ G D+L+  G D           +AG+ T+  VD+  +N 
Sbjct: 52  HLGHAWDTTLQDIVARYKRMRGFDMLWLPGMD-----------HAGIATQAKVDERLKN- 99

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKI 113
            +     DI  ++F++     ++ +  T R  W K+
Sbjct: 100 -EGISRYDIGRENFLKRAWEWKEEYASTIRKQWAKM 134


>gi|15924653|ref|NP_372187.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156979981|ref|YP_001442240.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006449|ref|ZP_05145050.2| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|81774901|sp|Q931Q1|SYV_STAAM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|166225533|sp|A7X383|SYV_STAA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14247435|dbj|BAB57825.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722116|dbj|BAF78533.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL- 398
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 399 --QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              ++ +  +   + RAL   I      D Y +  K   +   + ++      V    + 
Sbjct: 617 TVTDLSDKYEFGEVGRALYNFI-WDDFCDWYIEMSKI-PMNSNDEEQKQVTRSVLSYTLD 674

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +  +L  F+P +  KI+  L
Sbjct: 675 NIMRMLHPFMPFVTEKIWQSL 695



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|289553760|ref|ZP_06442970.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605]
 gi|289438392|gb|EFD20885.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605]
          Length = 875

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 438 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 491

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 492 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 551

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 552 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 607

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 608 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 661

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 662 QGLTHTTAVLAAGLDTLLRLLHP 684



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69
           H+GHA E  + D L R  R+ G +VL+  GTD  G        Q++A   K  ++ G   
Sbjct: 49  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 106

Query: 70  KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           ++FVD+                R + D +D S D F  T ++      R ++K++ D G 
Sbjct: 107 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 164

Query: 119 IYKG 122
           IY+ 
Sbjct: 165 IYRA 168


>gi|209559725|ref|YP_002286197.1| valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540926|gb|ACI61502.1| Valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 882

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+        E++ ++  V +     
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|167625140|ref|YP_001675434.1| leucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167355162|gb|ABZ77775.1| leucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 868

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 18/254 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     AA 
Sbjct: 41  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 101 KNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 161 KTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLNDLD 216

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E I         ++ S ++FD     PD    + YV I A
Sbjct: 217 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDQSFDIYTTRPDTVMGVTYVAI-A 271

Query: 235 LTNYLTTTGYLDNP 248
             + L     ++NP
Sbjct: 272 AGHPLAEQAAINNP 285


>gi|150396370|ref|YP_001326837.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027885|gb|ABR60002.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 947

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 24/237 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----------KVFSHGFILHK-GE 301
           K++  D+ V G DI+ F    W A ++   L   K            V+ H  +  K G+
Sbjct: 535 KYYQTDVLVTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQ 590

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +    N      + N 
Sbjct: 591 KMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRN--FGTKLWNA 648

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
              +        +G IP   + T ++  IL+  SR ++++ E +++   + A   +   V
Sbjct: 649 TRFAEMNGATSSEGFIPEAASLT-TNRWILTELSRTIRDVSEAIEDYRFNDAAGTLYRFV 707

Query: 422 SE--VDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP +        R S     T  V+ +   LL  F+P +  +++D
Sbjct: 708 WNQFCDWYLELLKPVFNGDDEAAKRESQA--CTAYVLDETYKLLHPFMPFMTEELWD 762



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++  R  
Sbjct: 52  HMGHALNNTLQDLMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQLRE- 99

Query: 81  RDMADVLDISYDDFI 95
           R +    ++  + FI
Sbjct: 100 RQLPGRREMGREAFI 114


>gi|94990882|ref|YP_598982.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544390|gb|ABF34438.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 882

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+        E++ ++  V +     
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|56807922|ref|ZP_00365746.1| COG0525: Valyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 882

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+        E++ ++  V +     
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|319939650|ref|ZP_08014009.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811239|gb|EFW07545.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 883

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWSFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDATWN--FINKIWN-ISRYILM 583



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|15927242|ref|NP_374775.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283336|ref|NP_646424.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486490|ref|YP_043711.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57650536|ref|YP_186549.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160762|ref|YP_494306.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195468|ref|YP_500272.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268144|ref|YP_001247087.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394211|ref|YP_001316886.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221770|ref|YP_001332592.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509882|ref|YP_001575541.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142585|ref|ZP_03567078.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317192|ref|ZP_04840405.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732314|ref|ZP_04866479.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257794050|ref|ZP_05643029.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415754|ref|ZP_05682025.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258422009|ref|ZP_05684929.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438233|ref|ZP_05689517.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443691|ref|ZP_05692030.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258444929|ref|ZP_05693249.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258447983|ref|ZP_05696115.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451821|ref|ZP_05699843.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454309|ref|ZP_05702278.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262052238|ref|ZP_06024443.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203281|ref|YP_003282550.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893160|ref|ZP_06301394.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920205|ref|ZP_06327930.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929338|ref|ZP_06336905.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024713|ref|ZP_06379111.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848686|ref|ZP_06789432.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405975|ref|ZP_06815783.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274908|ref|ZP_06857415.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207622|ref|ZP_06924057.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245099|ref|ZP_06928976.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911704|ref|ZP_07129148.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380744|ref|ZP_07363413.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649185|sp|Q6G8R2|SYV_STAAS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81704362|sp|Q7A0P4|SYV_STAAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81781461|sp|Q99TJ8|SYV_STAAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81859571|sp|Q5HFA8|SYV_STAAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|122539344|sp|Q2FXR8|SYV_STAA8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|123485492|sp|Q2FG72|SYV_STAA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|172048932|sp|A6QHJ8|SYV_STAAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083635|sp|A6U2D1|SYV_STAA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083636|sp|A5ITI8|SYV_STAA9 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083637|sp|A8Z2I4|SYV_STAAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13701460|dbj|BAB42754.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|21204776|dbj|BAB95472.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244933|emb|CAG43394.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57284722|gb|AAW36816.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126736|gb|ABD21250.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203026|gb|ABD30836.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741213|gb|ABQ49511.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946663|gb|ABR52599.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374570|dbj|BAF67830.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368691|gb|ABX29662.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723952|gb|EES92681.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788022|gb|EEV26362.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839347|gb|EEV63820.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842053|gb|EEV66482.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848277|gb|EEV72268.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851097|gb|EEV75040.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257856137|gb|EEV79052.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858744|gb|EEV81615.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860533|gb|EEV83359.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863539|gb|EEV86298.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259159839|gb|EEW44878.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|262075571|gb|ACY11544.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941145|emb|CBI49532.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282589070|gb|EFB94171.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594553|gb|EFB99538.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764478|gb|EFC04604.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817346|gb|ADC37833.1| Valyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824712|gb|EFG41135.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968972|gb|EFG44993.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887639|gb|EFH26537.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178179|gb|EFH37427.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300887125|gb|EFK82326.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302751490|gb|ADL65667.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340743|gb|EFM06674.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830042|emb|CBX34884.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130705|gb|EFT86691.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315198642|gb|EFU28970.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140457|gb|EFW32311.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143996|gb|EFW35765.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329314337|gb|AEB88750.1| Valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728349|gb|EGG64786.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 876

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|313901901|ref|ZP_07835320.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467842|gb|EFR63337.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 939

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 31/265 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++          +  +   WPADL++ G D  R  F +    A       
Sbjct: 525 IMDVWFDSGSSHAAVL------ETREDLTWPADLYLEGSDQHRGWFQSSLLTAVATRGRA 578

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF++  +G K+SKSLGNV+DP +VI   G D LR + V     G D    +
Sbjct: 579 PY-RAVLTHGFVVDGEGRKMSKSLGNVVDPNDVIRRYGADVLRLWAVSSDYRG-DVRISE 636

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQE 400
           D LK+   A++   I N + R +   L D+D     +P  G   E D   L+  ++V + 
Sbjct: 637 DILKQ--MAEVYRKIRNTL-RFLLANLGDFDPARDAVPY-GELGELDRWALARLAQVTER 692

Query: 401 IR---ENMQNQLIHRALAQVISLVSEVDR-YFDAQKP--WELKKTNPDR--ASTVLYVTV 452
           +R   E  Q  L++ A+      V+++   Y D  K   +     +P R  A TVLY   
Sbjct: 693 VRRAYEEYQYHLVYHAVHNFC--VTDLSAFYLDVLKDRLYASLPADPRRRAAQTVLY--- 747

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           ++ R L +LL   +   A +++  L
Sbjct: 748 QLARHLTLLLAPVLCHTAEEVWGHL 772



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-QNAGVTTKVFV 73
           Y N   H+G A   I+ DV+ R   + G D  +  G D HG  I + A +  GV  +   
Sbjct: 58  YANGDIHVGTALNKILKDVVVRHASMAGYDAPYVPGWDTHGLPIERRALEVLGVDRRAIS 117

Query: 74  DQNSRN-FRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDI 119
               RN  RD A D ++     F R            T E  +      ++ +++ +G I
Sbjct: 118 PVELRNRCRDYALDQMNRQRQQFRRLGVLGDWERPYLTLEPEYEAKQIEVFGEMARRGYI 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           Y+  YS ++   DE    + E+
Sbjct: 178 YRNLYSVYWCPVDETALAEAEI 199


>gi|307256925|ref|ZP_07538703.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306864659|gb|EFM96564.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 916

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 87  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 146

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 147 KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 206

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V++G   +       PV+  E   +F +++ Y ++LL++ +
Sbjct: 207 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 262

Query: 182 SHPEF 186
           + P++
Sbjct: 263 NLPQW 267


>gi|91228820|ref|ZP_01262727.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187625|gb|EAS73950.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 857

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209
              E  PE +  ++R    R+E +   F   G +DL +
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFKVKGQQDLEV 244


>gi|321456139|gb|EFX67254.1| hypothetical protein DAPPUDRAFT_189542 [Daphnia pulex]
          Length = 965

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 43/270 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           IM +W D+  ++ +       P G +A F+   +   G     F +    +   S + P 
Sbjct: 552 IMDIWFDSGVSWNSVL-----PQGKQADFYLEGIDQFGG---WFQSSLLTSVASSGHAPY 603

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-------EVGVDALRYFLVRE------ 332
            K +F HGF+L H+G K+SKSLGNVIDP  +++        VG+DALR+++         
Sbjct: 604 -KNIFVHGFVLDHEGRKMSKSLGNVIDPHLILDGDGKKQPAVGIDALRWWVASHVSANGG 662

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
            I+ G           +++ + L   +GNL + + S   K +     +P     +D+ +L
Sbjct: 663 NISVGIHSIQQASEDIQKMRSVLRFLLGNLNAVTCSQ-FKQF-----SPTTLGLTDQYML 716

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-----EVDRYFDA---QKPWELKKTNPDR 443
                +L E  EN  +        +V SLVS      V  ++ +    + +    T+ DR
Sbjct: 717 ----HLLSEFAENALSAYQEMNFRKVTSLVSAFINTSVSAFYCSIVKHRLYCHSLTSEDR 772

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            S  L+V  E++ Q+ +++   +P L  +I
Sbjct: 773 LS-ALFVLSEILDQITLIIAPILPHLTEEI 801



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++  ++  +     Y N +PH+GHA   I+ D+L+R+  L G  V F  G D HG  I  
Sbjct: 59  LQNEDEFILHDGPPYANGKPHMGHALNKILKDILSRYKLLSGKLVHFVPGWDCHGLPIEL 118

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
            A    + T   ++ NS   R  A +  +
Sbjct: 119 KA----LETHDVLNSNSLEIRQRAKLFAL 143


>gi|317180884|dbj|BAJ58670.1| valyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 872

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSITHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|239931291|ref|ZP_04688244.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291439664|ref|ZP_06579054.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291342559|gb|EFE69515.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 883

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPERTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  + V+ E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGPLPDASRMSPTDRWILSRLNSVVAEV 627


>gi|71903958|ref|YP_280761.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|90108441|sp|Q48SA4|SYV_STRPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71803053|gb|AAX72406.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 882

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+        E++ ++  V +     
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL-----TLEEAESNVAKVAASEAG- 605

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 606 ---NVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|329727331|gb|EGG63787.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 876

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI+E G D+LRYFL    + G D  
Sbjct: 499 TDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQ 399
           Y  + ++   N    N I N    S+  I +D+    I   G  + +D+ IL+  +  + 
Sbjct: 559 YSTEKVESVWN--FINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIA 616

Query: 400 EI 401
            +
Sbjct: 617 TV 618



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           +++ K   +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G    
Sbjct: 30  EDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQ 89

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            K+       G+T     D     F + A      Y  FIR 
Sbjct: 90  AKVEAKLNEQGITR---YDLGREKFLEQAWDWKEEYASFIRA 128


>gi|167969772|ref|ZP_02552049.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
          Length = 808

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 371 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 424

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 425 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 484

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 485 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 540

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 541 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 594

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 595 QGLTHTTAVLAAGLDTLLRLLHP 617


>gi|15609585|ref|NP_216964.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841972|ref|NP_337009.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793629|ref|NP_856122.1| valyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638331|ref|YP_978555.1| valyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662283|ref|YP_001283806.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823649|ref|YP_001288403.1| valyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|215404386|ref|ZP_03416567.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412207|ref|ZP_03420969.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215431396|ref|ZP_03429315.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|224990825|ref|YP_002645512.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254232583|ref|ZP_04925910.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis C]
 gi|254365225|ref|ZP_04981271.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|260201576|ref|ZP_05769067.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205754|ref|ZP_05773245.1| valyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443974|ref|ZP_06433718.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289575143|ref|ZP_06455370.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85]
 gi|289746231|ref|ZP_06505609.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289751055|ref|ZP_06510433.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92]
 gi|289754557|ref|ZP_06513935.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762618|ref|ZP_06521996.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis GM 1503]
 gi|297732047|ref|ZP_06961165.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525927|ref|ZP_07013336.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|54039701|sp|P67600|SYV_MYCBO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|54042057|sp|P67599|SYV_MYCTU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2791488|emb|CAA16025.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE)
           (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13882245|gb|AAK46823.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619222|emb|CAD97336.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE)
           (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121493979|emb|CAL72456.1| Probable valyl-tRNA synthase protein valS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601642|gb|EAY60652.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis C]
 gi|134150739|gb|EBA42784.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506435|gb|ABQ74244.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722176|gb|ABR06801.1| valyl-tRNA synthase valS (valyl-tRNA synthetase) [Mycobacterium
           tuberculosis F11]
 gi|224773938|dbj|BAH26744.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289416893|gb|EFD14133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289539574|gb|EFD44152.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85]
 gi|289686759|gb|EFD54247.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289691642|gb|EFD59071.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92]
 gi|289695144|gb|EFD62573.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710124|gb|EFD74140.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis GM 1503]
 gi|298495721|gb|EFI31015.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|326904063|gb|EGE50996.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis W-148]
 gi|328458240|gb|AEB03663.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 4207]
          Length = 876

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 439 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 492

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 493 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 552

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 553 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 608

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 609 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 662

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 663 QGLTHTTAVLAAGLDTLLRLLHP 685



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69
           H+GHA E  + D L R  R+ G +VL+  GTD  G        Q++A   K  ++ G   
Sbjct: 50  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 107

Query: 70  KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           ++FVD+                R + D +D S D F  T ++      R ++K++ D G 
Sbjct: 108 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 165

Query: 119 IYKG 122
           IY+ 
Sbjct: 166 IYRA 169


>gi|326779369|ref|ZP_08238634.1| Valyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326659702|gb|EGE44548.1| Valyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 873

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 27/264 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D S AKF+P  + V G DIL F       F L  N  +
Sbjct: 453 VLDTWFSSGLWPFSTLGWPERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGV 511

Query: 287 P--KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GNV++P++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFSTIVLHGMVRDEHGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402
           + ++   +A  +N I N  +R   M     +G +P     + +D  ILS  ++ + ++  
Sbjct: 572 EWVQG--SAKFSNKIWN-ATRFALMNGATIEGDLPPVEEMSVTDRWILSRLNKTVADVDA 628

Query: 403 -------ENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTVE 453
                    +   L H A  +V     E+ +  +F   +P E+             V  E
Sbjct: 629 FYDDFQFAKISEALRHFAWDEVFDWYVELSKTTFFAGGRPAEVSG----------RVLGE 678

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  +  LL   VP +   ++  L
Sbjct: 679 VLDVMLRLLHPIVPFVTEALWTAL 702


>gi|251782968|ref|YP_002997271.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391598|dbj|BAH82057.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 882

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|189083233|sp|B0TR44|SYL_SHEHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 18/254 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   DE    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSSVNWCPNDETVLANEQVI---DGCCWRCD-TTVEQKEIPQWFIKITEYAEELLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  PE +  ++R    R+E I         ++ S ++FD     PD    + YV I A
Sbjct: 208 QLDEWPEQVKTMQRNWIGRSEGIEMTFQ----VADSDQSFDIYTTRPDTVMGVTYVAI-A 262

Query: 235 LTNYLTTTGYLDNP 248
             + L     ++NP
Sbjct: 263 AGHPLAEQAAINNP 276


>gi|90022948|ref|YP_528775.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122995879|sp|Q21FG6|SYL_SACD2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89952548|gb|ABD82563.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 819

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I+DV++RFHR+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLAMFPYPSGRLHMGHVRNYTISDVISRFHRMQGKNVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N+   R     L   +D    + T +  ++   +  + ++ +KG  YK
Sbjct: 92  KNNTAPAKWTYSNTDYMRKQLTELGFGFDWSREVTTCKPDYYKWEQWFFTRLYEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +   D+    +++V    DGQ +      V+  E   +F R++ Y ++LL+  +
Sbjct: 152 KVASVNWCPNDQTVLANEQV---VDGQCWRCD-TAVERKEIPQWFIRITDYAEELLADLD 207

Query: 182 SHPEF 186
             P +
Sbjct: 208 KLPNW 212



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  KA +W P D +V G +    H +Y   F        L+  + P  +++   G +L  
Sbjct: 516 DPDKANYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLVECDEPF-ERLLCQGMVLKD 574

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           G K+SKS GN +DP ++I+  G D +R F
Sbjct: 575 GTKMSKSKGNTVDPEDLIKTYGADTVRLF 603


>gi|94311905|ref|YP_585115.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987833|sp|Q1LJ30|SYL_RALME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|93355757|gb|ABF09846.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 873

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 36  KEKSKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGRNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPEYYRWNQWLFLKMLEKG 153

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LL
Sbjct: 154 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELL 209

Query: 178 SYYE--SHPEFILPIER----RNEVISFV 200
              E    PE +  +++    R+E + F 
Sbjct: 210 GDLEGLGWPERVKIMQQNWIGRSEGVRFA 238


>gi|94988916|ref|YP_597017.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992808|ref|YP_600907.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542424|gb|ABF32473.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546316|gb|ABF36363.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 882

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|307244136|ref|ZP_07526254.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492507|gb|EFM64542.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 1040

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 34/259 (13%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  ++   P  K V     +L K G+K+SKS GN 
Sbjct: 547 ELFPADYICEGIDQTRGWFYSLLAVSTFVTGKSPY-KNVLVTDLVLDKNGKKMSKSKGNT 605

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMI 369
           I+P E+ E+ G DALR++L+          +D+DGLK+     ++  IG L +  +   +
Sbjct: 606 INPFEMFEKYGADALRWYLLYVSPPWTPLRFDEDGLKEI----MSKFIGTLKNTYNFFTL 661

Query: 370 LKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             + DG+ P           E D  ILS  + + +EI EN++   +++++ ++   ++  
Sbjct: 662 YANTDGLNPNDFFVEYKDRPELDRWILSKFNNLKKEIEENLEIFEVNKSIRRMTEFLN-- 719

Query: 425 DRYFDAQKPWELKKTN--------PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D    W ++++          +   +V   T EV+R    ++  F P L+ +++  
Sbjct: 720 ----DDLSNWYIRRSRRRFWGTELTEDKKSVYNTTYEVLRDFCKMIAPFSPYLSEEMYRN 775

Query: 477 L------FVADENRCFQSL 489
           L        AD  RC  SL
Sbjct: 776 LTGEYSVHCADYPRCDASL 794


>gi|297380329|gb|ADI35216.1| valyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 872

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSITHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|222153465|ref|YP_002562642.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114278|emb|CAR42908.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 883

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP+EV+E+ G DALR+FL    A G+D  
Sbjct: 499 TNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMEVVEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMI--------LKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M          + Y   +    A   +D  IL 
Sbjct: 559 FSYEKMDAAWN--FINKIWN-ISRYILMNNEGLTLAEAESYVAKVAASDAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIVKVTEN 627



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|315180775|gb|ADT87689.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 244

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 30/239 (12%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
           E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +     
Sbjct: 3   EHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMTPEEMIAAVSEEHQKDFAG 62

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-- 144
            DIS+D++  T  + + +    ++ ++   G I     S  +    E +  D  V KG  
Sbjct: 63  FDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFV-KGTC 121

Query: 145 --------------ADGQYYNAQH--NPVQWM--------EEEGYFFRLSAYQDKLLSYY 180
                         A G+ Y+     NP   +        + E +FF L  ++  L  + 
Sbjct: 122 PKCKSENQYGDNCDACGETYSPTELINPKSAVSGATPIMKDSEHFFFDLPQFESMLKEWT 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 182 RSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYVWLDAPVGYM 237


>gi|269965469|ref|ZP_06179588.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829948|gb|EEZ84178.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 857

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209
              E  PE +  ++R    R+E +   F   G +DL +
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244


>gi|262394986|ref|YP_003286840.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338580|gb|ACY52375.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 857

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209
              E  PE +  ++R    R+E +   F   G +DL +
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244


>gi|215427833|ref|ZP_03425752.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|218754182|ref|ZP_03532978.1| valyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|253798472|ref|YP_003031473.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435]
 gi|254551498|ref|ZP_05141945.1| valyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|294994442|ref|ZP_06800133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635056|ref|ZP_06952836.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|306776719|ref|ZP_07415056.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001]
 gi|306780493|ref|ZP_07418830.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002]
 gi|306785245|ref|ZP_07423567.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003]
 gi|306789604|ref|ZP_07427926.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004]
 gi|306793931|ref|ZP_07432233.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005]
 gi|306798325|ref|ZP_07436627.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006]
 gi|306804200|ref|ZP_07440868.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008]
 gi|306808771|ref|ZP_07445439.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007]
 gi|307080535|ref|ZP_07489705.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011]
 gi|307085135|ref|ZP_07494248.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012]
 gi|308378018|ref|ZP_07668650.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009]
 gi|313659383|ref|ZP_07816263.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|253319975|gb|ACT24578.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435]
 gi|308214880|gb|EFO74279.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001]
 gi|308326642|gb|EFP15493.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002]
 gi|308330067|gb|EFP18918.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003]
 gi|308333907|gb|EFP22758.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004]
 gi|308337710|gb|EFP26561.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005]
 gi|308341391|gb|EFP30242.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006]
 gi|308344878|gb|EFP33729.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007]
 gi|308349188|gb|EFP38039.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008]
 gi|308353809|gb|EFP42660.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009]
 gi|308361703|gb|EFP50554.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011]
 gi|308365313|gb|EFP54164.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012]
 gi|323718956|gb|EGB28106.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CDC1551A]
          Length = 886

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 502

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 503 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 562

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 563 LRFTLARGASPGGDLAVSEDAVRASRN----FGTKLFNATRYALLNGAAPAPLPSPNELT 618

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 619 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 672

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 673 QGLTHTTAVLAAGLDTLLRLLHP 695



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69
           H+GHA E  + D L R  R+ G +VL+  GTD  G        Q++A   K  ++ G   
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 117

Query: 70  KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           ++FVD+                R + D +D S D F  T ++      R ++K++ D G 
Sbjct: 118 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 175

Query: 119 IYKG 122
           IY+ 
Sbjct: 176 IYRA 179


>gi|33152252|ref|NP_873605.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|48428533|sp|Q7VM66|SYL_HAEDU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33148474|gb|AAP95994.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 861

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   VL  SY  D  I T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKNQLKVLGFSYDWDREITTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   DE    +++V++G   +       PV+  +   +F +++ Y ++LL+
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQRDIPQWFIKITDYAEELLT 204


>gi|254230581|ref|ZP_04923945.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151936897|gb|EDN55791.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 761

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVIS--FVKSGLKDLSL 209
              E  PE +  ++R    R+E +   F   G +DL +
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEV 244


>gi|229822985|ref|ZP_04449055.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271]
 gi|229787798|gb|EEP23912.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271]
          Length = 927

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 21/198 (10%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E IL  E    V +  ++   ++   R+  D    G   P  P
Sbjct: 455 RQRAWGVPLPIFYAENGEAILTAETIEHVATLFETHGSNVWFEREAKDLLPEGFTHPASP 514

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ T+Y    G L+  D      +PADL++ G D  R  F++ + 
Sbjct: 515 NGKFTKETDIMDVWFDSGTSY---AGVLEARDYLT---FPADLYLEGSDQYRGWFNSSFT 568

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            + + +  +P  K V S GF+L  KG K+SKSLGNVI P EV+ E+G D +R + V  + 
Sbjct: 569 TS-VAAKGVPPYKAVLSQGFVLDGKGNKMSKSLGNVIVPEEVMNELGADIIRLW-VLSVD 626

Query: 335 CGKDGFYDKDGLKKRVNA 352
              D    KD LK+   A
Sbjct: 627 SESDVRISKDILKQIAEA 644


>gi|21910809|ref|NP_665077.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895501|ref|NP_801851.1| valyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759036|sp|Q8K6M9|SYV_STRP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21905014|gb|AAM79880.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810747|dbj|BAC63684.1| putative valine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 882

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++   L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQTLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEEAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 99  GQGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 157 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 204


>gi|110679054|ref|YP_682061.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|109455170|gb|ABG31375.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 1031

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 121/298 (40%), Gaps = 38/298 (12%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----LDNPDGSK 252
            F    L  +SL R           DP  ++  W  +    + T G+     LD  + + 
Sbjct: 566 GFSNGSLSSVSLRR-----------DPD-VLDTWFSSGLWPIGTLGWTGDAELDAQNDAL 613

Query: 253 AKFWPADLHVIGKDILRFHAIYWPA------FLLSANLPLPKKVFSHGFIL-HKGEKISK 305
            K++P    + G DI+ F    W A      + ++   P    V+ H  +   KG+K+SK
Sbjct: 614 QKYFPTSTLITGFDIIFF----WVARMMMMQYAVTGQKPF-STVYVHALVRDEKGKKMSK 668

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVS 363
           SLGNVIDP+++I+E G DA+R+ L    A G+D       +   +     L N       
Sbjct: 669 SLGNVIDPLDMIDEFGADAVRFTLTAMAAMGRDLKLSTQRIAGYRNFGTKLWNACRFAEM 728

Query: 364 RSVSMILKDYDGMIPT---PGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             V         +IPT   P A  E   ++ I+   ++V +EI   ++N   + A     
Sbjct: 729 NEVFAQRAARTDVIPTQNRPPADVEQAVNKWIIGETAKVREEIDAALENYRFNDAANAAY 788

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + V     D Y +  KP      N + A+        V+ Q  ILL   +P +   ++
Sbjct: 789 AFVWGKVCDWYVELSKPLLQDAANAEFAAETRATMAWVLDQCMILLHPIMPFITEDLW 846



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 32/116 (27%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA+   + D+L R+HR+ G D L+  GTD           +AG+
Sbjct: 40  SIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTD-----------HAGI 88

Query: 68  TTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            T++  ++    N    R      D++ DDF+           R+  +K+  +G I
Sbjct: 89  ATQMVTEREMAANGEGRRQ-----DMTRDDFV----------ARVWQQKVKSRGTI 129


>gi|289758580|ref|ZP_06517958.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85]
 gi|289714144|gb|EFD78156.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85]
          Length = 699

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 262 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 315

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 316 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 375

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 376 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 431

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 432 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 485

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 486 QGLTHTTAVLAAGLDTLLRLLHP 508


>gi|215446695|ref|ZP_03433447.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 714

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 277 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 330

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 331 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 390

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 391 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 446

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 447 DADRWILGRLEEVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 500

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 501 QGLTHTTAVLAAGLDTLLRLLHP 523


>gi|182438720|ref|YP_001826439.1| valyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178467236|dbj|BAG21756.1| putative valyl-tRNA synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 873

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 27/264 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D S AKF+P  + V G DIL F       F L  N  +
Sbjct: 453 VLDTWFSSGLWPFSTLGWPERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGV 511

Query: 287 P--KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GNV++P++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFSTIVLHGMVRDEHGKKMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR- 402
           + ++   +A  +N I N  +R   M     +G +P     + +D  ILS  ++ + ++  
Sbjct: 572 EWVQG--SAKFSNKIWN-ATRFALMNGATIEGDLPPVEEMSVTDRWILSRLNKTVADVDA 628

Query: 403 -------ENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTVE 453
                    +   L H A  +V     E+ +  +F   +P E+             V  E
Sbjct: 629 FYDDFQFAKISEALRHFAWDEVFDWYVELSKTTFFAGGRPAEVSG----------RVLGE 678

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  +  LL   VP +   ++  L
Sbjct: 679 VLDVMLRLLHPIVPFVTEALWTAL 702


>gi|329116079|ref|ZP_08244796.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906484|gb|EGE53398.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 833

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    +
Sbjct: 29  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+   +  W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 149 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202

Query: 176 LLSYYES--HPEFILPIER 192
           LL   E    PE I  ++R
Sbjct: 203 LLEDLEEVDWPESIKDMQR 221


>gi|32033514|ref|ZP_00133841.1| COG0495: Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208348|ref|YP_001053573.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976293|ref|YP_001651886.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251268|ref|ZP_07337446.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303252870|ref|ZP_07339029.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247860|ref|ZP_07529896.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307252499|ref|ZP_07534395.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307261357|ref|ZP_07543032.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|166230605|sp|A3N0N2|SYL_ACTP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687565|sp|B0BPF7|SYL_ACTPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126097140|gb|ABN73968.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876394|gb|ABY69442.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648300|gb|EFL78497.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302649810|gb|EFL79988.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306855662|gb|EFM87829.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306860091|gb|EFM92108.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306869088|gb|EFN00890.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 861

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V++G   +       PV+  E   +F +++ Y ++LL++ +
Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|307245736|ref|ZP_07527822.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307254707|ref|ZP_07536535.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259149|ref|ZP_07540879.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306853438|gb|EFM85657.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306862380|gb|EFM94346.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866816|gb|EFM98674.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 861

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V++G   +       PV+  E   +F +++ Y ++LL++ +
Sbjct: 152 KTSTVNWCPNDATVLANEQVHEGCCWRC----DTPVEQREIPQWFIKITDYAEELLTHLD 207

Query: 182 SHPEF 186
           + P++
Sbjct: 208 NLPQW 212


>gi|206895292|ref|YP_002246977.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737909|gb|ACI16987.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 838

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR++R+ G DVL   G D  G     AA 
Sbjct: 46  KPKQYVLEMFPYPSGKLHMGHVRNYSLGDVVARYNRMRGFDVLHPMGWDAFGLPAENAAI 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +   N    R+    L  SY  D  + T    ++   + L+ K+ + G  YK
Sbjct: 106 ERGIHPENWTLSNIGYMREQMKKLGFSYDWDREVATCLPDYYKWTQWLFLKLYENGLAYK 165

Query: 122 G-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
                 W         N+  +    DG+ +   H+P++  E E +FF+++AY +
Sbjct: 166 KRAKVNWCPHCKTVLANEQVI----DGKCWRC-HSPIEKREIEQWFFKITAYAE 214



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 39/245 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-------NLPLP-KKVFSHGFILHK 299
           D   A++W P D+++ G +    H +Y   F+  A        +  P  K+F+ G +   
Sbjct: 533 DKELAQYWMPVDIYIGGVEHAVLHLLY-SRFITKALKDMGYVTISEPFSKLFTQGMVTLG 591

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-----ADL 354
           G  +SKS GN++DP +++ + G DA R + +      KD  + + GL+  V       + 
Sbjct: 592 GSAMSKSKGNIVDPDDILRDYGADAARMYTLFVAPPEKDFEWSQQGLEGIVRFIRRIWNF 651

Query: 355 ANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHR 412
                + V  +V+  + K ++GM       +E DE  L   +R++  + E+++ N   + 
Sbjct: 652 YCKYADEVKEAVAAPMGKLFEGM-------SEYDEKALRAVNRLVYRVTEDIEDNYRFNT 704

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A ++  ++EV  Y              ++ S+ +  T  ++   A +L  FVP LA +
Sbjct: 705 AIAAMMEFLNEVTDY-------------DEKVSSAVMKT--LLETFAKVLAPFVPFLAEE 749

Query: 473 IFDIL 477
           ++ +L
Sbjct: 750 LWAML 754


>gi|331265790|ref|YP_004325420.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682462|emb|CBZ00079.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 883

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TDRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+ +
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVINK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|317009763|gb|ADU80343.1| valyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 872

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAVS 590



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|315635076|ref|ZP_07890356.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476197|gb|EFU66949.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 862

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIEYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDKTVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 DLPQW 212


>gi|315303316|ref|ZP_07873947.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628314|gb|EFR96816.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 882

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 509 PF-KDTLIHGLVRDAEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401
           + ++   N    N I N  SR V M L D     I        SD+ IL+  +  +Q +
Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNLNDMKYNEIDLTNVTEVSDKWILTRLNETIQSV 623



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  D  SR      NF          Y DFIR                 T +    D
Sbjct: 99  EAKLKEDNISRYDLGRDNFIKKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDDGLSD 158

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++ K+ +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 159 AVKKVFVKLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGNFYHLKY 209


>gi|312882703|ref|ZP_07742440.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369664|gb|EFP97179.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 857

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           +     PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DKLDGWPEMVKTMQRNWIGRSEGVELKFEVPGHQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATIAAQNNPE 276


>gi|208435048|ref|YP_002266714.1| valyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432977|gb|ACI27848.1| valyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 872

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAVS 590



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + DVLAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDVLARYKRMDGYKTLYQPGLDHAG 90


>gi|189485558|ref|YP_001956499.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287517|dbj|BAG14038.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 883

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 16/231 (6%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKISKSLG 308
           F+PA +   G +I+      W A ++   L   K      VF HG +  K G+K+SKSLG
Sbjct: 480 FYPASVLATGHEIIYL----WVARMVQFGLEFMKDVPYSNVFIHGIVRDKNGKKMSKSLG 535

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P +++++ G DALR+ L +  A G+D    ++      N   AN I N  SR + +
Sbjct: 536 NVVNPGDIMDKYGTDALRFALAQVAAPGRDMQISEESFLAARN--FANKIWN-ASRFIII 592

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDR 426
             +D   +      F  +DE I++  +    +++ + ++  I  A  ++         D 
Sbjct: 593 NSQDISELDKNIQTFELADEWIIAEFAATASKVKADYESYNIDSAAREIYDFFWTKYCDW 652

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K   +   + +    VL + V V++    L+   +P +A +I+ IL
Sbjct: 653 YVELSKI-RIMSADLNVKKRVLSILVYVLKSTLQLVSPVMPFIAEEIWRIL 702



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA  + + D++ RF +L G + L+  GTD  G
Sbjct: 49 HMGHALNVTLQDIIIRFKKLKGYNTLWVPGTDHGG 83


>gi|71911105|ref|YP_282655.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71853887|gb|AAZ51910.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 801

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 361 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 416

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 417 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 476

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 477 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 521

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 522 EAGNVTDQWILHNLNETIAKVTE 544


>gi|94994796|ref|YP_602894.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548304|gb|ABF38350.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 882

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98

Query: 64  NAGVT 68
             G+T
Sbjct: 99  GQGIT 103


>gi|301154877|emb|CBW14340.1| leucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 862

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPIGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   Y  D  I T    ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIEYMKNQLKMLGFGYDWDREIATCSPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGGLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 QLPQW 212


>gi|15675460|ref|NP_269634.1| valyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533485|sp|Q99YS1|SYV_STRP1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13622652|gb|AAK34355.1| putative valine-tRNA ligase [Streptococcus pyogenes M1 GAS]
          Length = 882

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|306826992|ref|ZP_07460290.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430738|gb|EFM33749.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 882

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTIGWPDTDVEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   S  ++V   
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEDAESNVAKVAAS 602

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ +Q I   L + I+ V+E
Sbjct: 603 EAGNVTDQWILHNLNETIAKVTE 625



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|171920261|ref|ZP_02691263.2| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902665|gb|EDT48954.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 874

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 31/236 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSL 307
           +++P  L V G DIL F    W + +++ +  L +K     V  HG I   +G K+SKSL
Sbjct: 473 RYFPTSLIVTGMDILFF----WVSRMMNFSQYLVEKKPFKDVLIHGLIRDSQGRKMSKSL 528

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA-----DLANGIGNLV 362
           GN IDP ++I++ G+DA+R F       G+D  +  + L    N      ++A  I NL 
Sbjct: 529 GNGIDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERLGANWNYLNKIWNIAKYIENLD 588

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
             + ++  +D D        F + ++ IL+  S++  EI +NM    +  A   +   + 
Sbjct: 589 EINDNLNFEDVD-------KFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLYDFIW 641

Query: 422 -SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +    Y +  K    +L   N +   T+ Y    V  ++ I+LQ F P ++ +I+
Sbjct: 642 NTFASYYLEYTKVLLQDLTLKN-ETIKTIRY----VFNKILIMLQPFAPNISEEIW 692



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHAY+  ++D+L R+ +L G D     GTD  G
Sbjct: 53 HIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAG 87


>gi|163857126|ref|YP_001631424.1| isoleucyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|254782369|sp|A9IRC2|SYI_BORPD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163260854|emb|CAP43156.1| ileS [Bordetella petrii]
          Length = 953

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 15/203 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T + T  G  D   G        WPADL++ G D  R  FH+      +L    
Sbjct: 546 VWFDSGTTHATVLGGKDQALGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQE 400
             + KRV  +    I N + R +   + D+D +   +P  G   E D   L++ +++  E
Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANVADFDAVSQAVPY-GELFEIDRYALTMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
           +  + +    H A++++ +  SE
Sbjct: 720 VLAHYERYDFHPAVSRLQTFCSE 742



 Score = 37.0 bits (84), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           + R +  +     Y N   HIGHA   ++ D++ +   + G D  +  G D HG  I
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKVLKDIIVKSRNMAGYDAHYVPGWDCHGMPI 101


>gi|313890366|ref|ZP_07823997.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121209|gb|EFR44317.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 833

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAAFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|13357827|ref|NP_078101.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762145|ref|YP_001752350.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508747|ref|ZP_02958221.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701957|ref|ZP_02971594.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|12585354|sp|Q9PQM4|SYV_UREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|11271419|pir||E82913 valyl-tRNA synthetase UU267 [imported] - Ureaplasma urealyticum
 gi|6899238|gb|AAF30676.1|AE002123_9 valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827722|gb|ACA32984.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675679|gb|EDT87584.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700717|gb|EDU18999.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 874

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 31/236 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSL 307
           +++P  L V G DIL F    W + +++ +  L +K     V  HG I   +G K+SKSL
Sbjct: 473 RYFPTSLIVTGMDILFF----WVSRMMNFSQYLVEKKPFKDVLIHGLIRDSQGRKMSKSL 528

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA-----DLANGIGNLV 362
           GN IDP ++I++ G+DA+R F       G+D  +  + L    N      ++A  I NL 
Sbjct: 529 GNGIDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERLGANWNYLNKIWNIAKYIENLD 588

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
             + ++  +D D        F + ++ IL+  S++  EI +NM    +  A   +   + 
Sbjct: 589 EINDNLNFEDVD-------KFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLYDFIW 641

Query: 422 -SEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +    Y +  K    +L   N +   T+ Y    V  ++ I+LQ F P ++ +I+
Sbjct: 642 NTFASYYLEYTKVLLQDLTLKN-ETIKTIRY----VFNKILIMLQPFAPNISEEIW 692



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHAY+  ++D+L R+ +L G D     GTD  G
Sbjct: 53 HIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAG 87


>gi|125973752|ref|YP_001037662.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004483|ref|ZP_05429462.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417908|ref|ZP_06248928.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231601|sp|A3DEU0|SYL_CLOTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|125713977|gb|ABN52469.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991488|gb|EEU01591.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409310|gb|EFB39568.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940054|gb|ADU74088.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 825

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 36/244 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP--------KKVFSHGFILHK 299
           D  + ++W P D ++ G +    H +Y   FL+     L           + + G +L  
Sbjct: 519 DKERIRYWLPVDQYIGGVEHAILHLLY-SRFLMKVLYDLGYVDYDEPFTNLLTQGMVLKD 577

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+ P E+IE+ G D  R F++      KD  +   G++         G  
Sbjct: 578 GAKMSKSLGNVVSPEEIIEKYGADTARLFILFASPPEKDLEWSDQGVE---------GCY 628

Query: 360 NLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
             ++R V  I+ ++   +   G      FT++D+ +  + +  L+ + +++  +   + A
Sbjct: 629 RFINR-VWRIVNEFADAVKEGGNIDTSTFTKADKELWYMLNNTLKRVTDDISQRFNFNTA 687

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ V+ LV+ +  Y D        K   D  +  L    EVI +L I+L  F+P    ++
Sbjct: 688 ISAVMELVNSLYYYKD--------KVADDSKNKAL--VREVIEKLIIMLAPFIPHATEEL 737

Query: 474 FDIL 477
           +  +
Sbjct: 738 WSAI 741



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 43/91 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++K Y+     YP+   H+GH     I DV+ARF R++G +VL   G D  G     A
Sbjct: 28  ESKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKRMNGFNVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   GV    +   N  N R     L ISYD
Sbjct: 88  AIKRGVHPNDWTWSNIDNMRRQLKQLGISYD 118


>gi|329928481|ref|ZP_08282349.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937740|gb|EGG34148.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 889

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P  + V G DI+ F    + +     +  +
Sbjct: 457 VLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTSVLVTGYDIIPFWVSRMIFQGLEFTGQM 516

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN IDP+EVIE+ G DA+RY +      G+D  +  
Sbjct: 517 PF-KDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRW 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401
           + +++  N   AN I N  SR   M L+ +    I   G    +D  IL   +   ++I
Sbjct: 576 ERVEQARN--FANKIWN-ASRFALMNLEGFTVADIDISGELGTADRWILHRLNETSRDI 631



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D+L R  R+ G D L+  G+D  G     K+ +  +  GVT        
Sbjct: 60  HIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREK 119

Query: 69  --TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYK 121
              KV  + D  +   RD    + +S  D+ R   T ++   +  R ++ K+ DKG IY+
Sbjct: 120 FLEKVWEWKDLYANTIRDQWSKIGLSL-DYSRERFTLDEGLSEAVREVFVKLYDKGLIYR 178

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           G     +        +D EV YK  +G  Y+ Q+
Sbjct: 179 GKRIINWDPAARTALSDIEVEYKEVNGHLYHLQY 212


>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 929

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ ++++     L+N +G     WPADL++ G D  R  F +    +       
Sbjct: 530 IMDVWFDSGSSHVAV---LENREGLS---WPADLYLEGNDQHRGWFQSSLLTSVATKGTA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +KV +HG+++  +G K+SKSLGN IDP +VI+E G D LR ++ 
Sbjct: 584 PY-RKVLTHGYVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWVA 629


>gi|78186274|ref|YP_374317.1| valyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|78166176|gb|ABB23274.1| valyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 901

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 50/280 (17%)

Query: 227 IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           ++  W  +    LTT G+     DN D     F+P D  V G DI+ F    W A ++ A
Sbjct: 458 VLDTWFSSWLWPLTTLGWTGPKSDNED--LRAFYPTDTLVTGPDIIFF----WVARMIMA 511

Query: 283 NL------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +      P     F+      KG K+SKSLGN  DP++VI+  G DALR+ ++     G
Sbjct: 512 GMYFKGDVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIIYIAPLG 571

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-----------ILKDYDGMIPTPGAFTE 385
           +D  + ++  K  +  + A  I N  SR V M             + Y+G  P+  +F  
Sbjct: 572 QDVLFGEE--KCELGRNFATKIWN-ASRLVFMQREKHFEGPEDFARYYEGFDPSLESFDM 628

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPW 434
           +   ILS  + +L+           H A AQ     ++  V E       D Y +A K  
Sbjct: 629 AGRWILSSYNAMLER---------YHAAFAQFRMNDIVKTVYEFFWGDYCDWYLEALKVT 679

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +  +P  A   + + V V+      L   +P + ++I+
Sbjct: 680 LAEGCSPVDARKAVALAVHVLEGSLKALHPVMPFITDEIW 719


>gi|312864725|ref|ZP_07724956.1| valine--tRNA ligase [Streptococcus downei F0415]
 gi|311099852|gb|EFQ58065.1| valine--tRNA ligase [Streptococcus downei F0415]
          Length = 883

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 19/200 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +    N    N I N +SR    IL + +G+          DE+  +V      E   
Sbjct: 562 EKMDASWN--FINKIWN-ISR---YILMNNEGL--------SLDEATTNVAKVAASEAG- 606

Query: 404 NMQNQLIHRALAQVISLVSE 423
           N+ ++ I   L + I+ V+E
Sbjct: 607 NVTDRWILHNLNETIAKVTE 626



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYAATIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|213966169|ref|ZP_03394355.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951184|gb|EEB62580.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 911

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 124/290 (42%), Gaps = 50/290 (17%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL 280
           DP  ++  W  +     +T G+   P+ +    KF+P  + V G DIL     +W A ++
Sbjct: 452 DPD-VLDTWFSSALWPFSTMGW---PEATPELEKFYPTSVLVTGYDIL----FFWVARMM 503

Query: 281 -----SANLP-------------LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320
                +ANLP             +P K VF HG +   +G K+SKSLGN IDP++ + + 
Sbjct: 504 MFSTFAANLPDSPLGKGRDGRPQVPFKDVFLHGLVRDEQGRKMSKSLGNGIDPLDWVRDY 563

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L R    G D     D  +   N   A  + N  +   +++   + G +P  
Sbjct: 564 GADALRFTLARGANPGSDLPVGNDAAQSSRN--FATKLFN--ATRFALMNGAHMGELPDR 619

Query: 381 GAFTESDESILSVCSRVLQEIRENM--------QNQLIHRALAQVISL---VSEVD--RY 427
              T++D  IL    +V  E+   +           L H A  +V      +++VD  R 
Sbjct: 620 DQLTDTDRWILDRLEQVRAEVDSALDRYEFSKANEALYHFAWDEVCDWYLEMTKVDFPRL 679

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D +    + +    RA++   V   V+  L  LL   +P +   ++  L
Sbjct: 680 NDGET---MTEEQAARAASTRLVLGRVLDTLLRLLHPSMPFVTETLWKAL 726


>gi|194290700|ref|YP_002006607.1| leucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|193224535|emb|CAQ70546.1| leucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 879

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 42  KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 101

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 102 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 159

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y ++LL
Sbjct: 160 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITEYAEELL 215

Query: 178 S 178
            
Sbjct: 216 G 216


>gi|117619872|ref|YP_857738.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117561279|gb|ABK38227.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 910

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 82  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 141

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 142 IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 201

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   S  +   D     +++V    D   +     PV+  E   +F +++ Y ++LL+  
Sbjct: 202 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLNDI 257

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 258 DNLEGWPEMVKTMQR 272


>gi|13474936|ref|NP_106506.1| tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14025692|dbj|BAB52292.1| mlr5926 [Mesorhizobium loti MAFF303099]
          Length = 581

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 118/311 (37%), Gaps = 38/311 (12%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGKD 266
           DWG+     P  + +VW +    +L     L     S  + W A L        H  G D
Sbjct: 267 DWGLPAEGFPGQVTWVWPEMAFGFLYNIQTLAT---SLGRHWNAALPSKDWQIVHFFGFD 323

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSH----------GFILHKGEKISKSLGNVIDPIEV 316
              +HA+ +PA        L  +VFSH           F L  G+K S S  + +   EV
Sbjct: 324 NSFYHALLYPA--------LYAEVFSHWTPRIRYHVNEFYLLDGQKFSTSRSHAVWGKEV 375

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + +  VD +R  L      G+   +  D L++  N        N +      I +D+ G 
Sbjct: 376 LGQKTVDVVRLHLGLTRPEGERTNFTLDALRRTENEVFQGIWLNWLDALHGEIKQDFGGC 435

Query: 377 IPTPGAFTESDESILSVCS--RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P  G +  +D +        R   E   +     + RA AQ    VS+   Y  AQ   
Sbjct: 436 VPDAGDWAPADRAFFGRIEIHRAAMERAYSDDGFSVRRAAAQACDFVSDCVVYRRAQDYE 495

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQRL 493
             ++  P R  T L +       LA  L   +P+ A+ +   I  V+ E   + +  +RL
Sbjct: 496 AARRLYPARTRTSLALQTTAAAILAQTLAPLMPRFASTLARGIDGVSTET--WPTSVRRL 553

Query: 494 KPGFMLHKTFD 504
            PG     TFD
Sbjct: 554 APG----TTFD 560



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  +++ +    PN   H+GH +   + ADV  RF R+ G++    TG+D++   +A  A
Sbjct: 34  RGPIFVFSTPPTPNGDLHLGHLSGPYLGADVYTRFLRMKGVEAYHLTGSDDYQSYVATRA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                T        +   R    +LD     F+ T
Sbjct: 94  DAEQSTPGKVARHYADEIRATLALLDCEVHSFLPT 128


>gi|303231424|ref|ZP_07318155.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513861|gb|EFL55872.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 822

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+   H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  ESKEKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKKMNGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKKQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGLCWRCD-NPVEKKDLSQWFLRITEY 198



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 134/313 (42%), Gaps = 43/313 (13%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYL 239
           PE  LP+ R  E + F    +  L+ S    +        P       M  +ID+   +L
Sbjct: 450 PEEELPV-RLPEDVKFESGAVSPLATSEAFMNAKCPKCGGPARRETDTMDTFIDSSWYFL 508

Query: 240 TTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP 287
             T  L++    D   A +W   D ++ G +    H +Y   F        L+ AN P  
Sbjct: 509 RYTDALNDKAPFDSKIANYWMNVDQYIGGIEHAILHLLYSRFFVKVIHDLGLIEANEPF- 567

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +L +G K+SKS GNV+ P E+I + G D  R F++      +D  +   G++
Sbjct: 568 RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINKYGADTARLFILFAAPVDRDLDWSDQGVE 627

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405
                    G    + R V  I+  YD        G  T+ + ++     RV++++ E++
Sbjct: 628 ---------GSYRFLGR-VWRIVDAYDQAAKENHTGDLTKDEVALRRELHRVIKKVTEDL 677

Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            N    + A++ ++ LV+ +  + D     + +  N D A+       E+   L +LL  
Sbjct: 678 DNNFNFNTAISAIMELVNAMYAHKD-----KAESVNADLAN-------ELTHNLVLLLAP 725

Query: 465 FVPKLANKIFDIL 477
           FVP +  +++  L
Sbjct: 726 FVPHITEELWHEL 738


>gi|291001311|ref|XP_002683222.1| predicted protein [Naegleria gruberi]
 gi|284096851|gb|EFC50478.1| predicted protein [Naegleria gruberi]
          Length = 487

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 30/269 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV +R+ +  G + L+  GTDE+G      A
Sbjct: 17  QRNILITSALPYVNNYPHLGNIVGAVLSADVFSRYCKQKGYNTLYICGTDEYGTATETKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +    +  +  + + +  DI +D F RT+ K+  +  + ++ K+   G + + 
Sbjct: 77  FQEKTTPEAICAKYYQLHKQVYEWFDIDFDHFGRTSTKQQTEIAQDIFLKLHQNGFLTEK 136

Query: 123 CYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQH---NPVQWM----------- 160
                Y    + +  D  V        Y+ A G   +      NP + +           
Sbjct: 137 TIEQLYDEESKTFLADRFVKGTCPTCLYEDARGDQCDKCGKLLNPTELINPRSTTTGSVP 196

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFI-LPIERRNEVISFVKSGLKDLSLSRKTFDW 216
              E    F +L   Q K   +++++ +        R+   S+   GL++  ++R    W
Sbjct: 197 IIKETNHIFIKLQDLQHKTKEWFQNNKDTAQWTTVARSITQSWFDKGLEERCITRD-LKW 255

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           G  +P +     + YVW DA   Y++ T 
Sbjct: 256 GTPVPLEKFADKVFYVWFDAPIGYISITA 284


>gi|325577505|ref|ZP_08147867.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160609|gb|EGC72733.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 862

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPIGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   Y  D  I T    ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIEYMKNQLKMLGFGYDWDREIATCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGGLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 QLPQW 212


>gi|308062430|gb|ADO04318.1| valyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 872

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSIAHLEN--NKNFANKIFNAVS 590



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|319651731|ref|ZP_08005857.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396550|gb|EFV77262.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 881

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 44/270 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    D+ ++      +     ER  +        ++D  +SR+ + WG +IP   
Sbjct: 364 WFVKMQPLADEAIALQTKEEKVNFVPERFEKTYLRWMENIRDWCISRQLW-WGHRIPAWY 422

Query: 222 --------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                               +  + ++  W  +     +T G+ D       +++P    
Sbjct: 423 HKETGEVFVGHEAPEDIENWEQDKDVLDTWFSSALWPFSTMGWPDTDSSDFKRYYPTAAL 482

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIE 315
           V G DI+ F    W + ++   L        + V  HG +   +G K+SKSLGN +DP++
Sbjct: 483 VTGYDIIFF----WVSRMIFQGLEFTGERPFQDVLIHGLVRDSQGRKMSKSLGNGVDPMD 538

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N    +    L + DG
Sbjct: 539 VIDQYGADSLRYFLSTGSSPGQDLRFSMEKVEATWN--FANKIWN----ASRFALMNMDG 592

Query: 376 M----IPTPGAFTESDESILSVCSRVLQEI 401
           +    I   G  + +D+ IL+  +  ++ +
Sbjct: 593 LTYEEIDLSGEKSVADKWILTRLNETIETV 622



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 47/179 (26%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D           +AG+
Sbjct: 43  TIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMD-----------HAGI 91

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK---RHHDTCRILWKKIS---------- 114
            T+  V++  RN  D     D+  + F+  T K    +    R  W K+           
Sbjct: 92  ATQAKVEEKLRN--DGKSRYDLGREKFVEETWKWKEEYASHIRQQWSKLGLGLDYSRERF 149

Query: 115 ------------------DKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                             +KG IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 150 TLDEGLSKAVREVFVSLYNKGLIYRGEYIINWDPSTKTALSDIEVIYKDVQGAFYHMRY 208


>gi|313618762|gb|EFR90666.1| valyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 882

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYDEIDLSNVTEVSDKWILTRLNETIQ 621

Query: 400 EI 401
            +
Sbjct: 622 AV 623



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F D        Y DFIR                 T +    D
Sbjct: 99  EAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 158

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 159 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209


>gi|296444651|ref|ZP_06886615.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257919|gb|EFH04982.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 904

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 33/266 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +K   +F+P ++ V G DI+     +W A ++   L
Sbjct: 474 VLDTWFSSALWPFSTLGW---PDETKELERFYPTNVLVTGFDII----FFWVARMMMMGL 526

Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              K+V  H   +H      KG K+SKS GNVIDP+ +I + G DALR+ L    A G+D
Sbjct: 527 YFKKEVPFHDVYIHALVRDEKGAKMSKSKGNVIDPLHLINDYGADALRFTLAAMAAQGRD 586

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDES-----ILS 392
                     ++      G  N  ++  +     + +G    PG     +E      I+S
Sbjct: 587 ---------IKLATQRVEGYRNFATKLWNASRFAEINGCARVPGYDPARNEITLNRWIVS 637

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  +EI   ++    + A       V  V  D Y +  KP  L+  +          
Sbjct: 638 EAARAAEEIGAAIEAYRFNDAAGAAYRFVWNVFCDWYLELAKPL-LQGEDGAAKDETRAA 696

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDI 476
               + Q+  LL  F+P L  +++ +
Sbjct: 697 AAFTLDQIYALLHPFMPFLTEELWGV 722



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+LAR+ R+ G DVL+  GTD           +AG+
Sbjct: 38 SIVIPPPNVTGSLHMGHALNNTLQDILARYQRMRGRDVLWQPGTD-----------HAGI 86

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 87 ATQMVVERK 95


>gi|16800655|ref|NP_470923.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526882|sp|Q92BG2|SYV_LISIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16414074|emb|CAC96818.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 882

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYDEIDLSNVTEVSDKWILTRLNETIQ 621

Query: 400 EI 401
            +
Sbjct: 622 AV 623



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F D        Y DFIR                 T +    D
Sbjct: 99  EAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 158

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 159 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209


>gi|302540507|ref|ZP_07292849.1| putative methionyl-tRNA synthetase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458125|gb|EFL21218.1| putative methionyl-tRNA synthetase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 526

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 177/452 (39%), Gaps = 53/452 (11%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           L+I+      + + HIGH A   + ADVL+R  R DG  VLF+TGT +H + +   A  A
Sbjct: 5   LWITATPPATHGELHIGHLAGPYVAADVLSRHLRADGRPVLFSTGTADHTESVELRALRA 64

Query: 66  G------------------VTTKVFVDQNSRNFRDMAD-------VLDISYDDFIRTTEK 100
           G                  + + V  D   +  RD           LD+   D I     
Sbjct: 65  GRKPEEVAEGYRVAITADWLRSGVEFDHIVQPRRDRGYQRWVQNLFLDLYGQDVI-VART 123

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQ 158
           R H  C    + +   G    G  S   +  D +  ++      AD          +P +
Sbjct: 124 RLHPFCPSCERWL--HGAFVMGACSACGARADGSLCHECARPTDADLIDPVCALCGSPGE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYY---ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  +  L   ++ L  ++   ES P      E      S ++ GL ++++     D
Sbjct: 182 RHRCRRLYLPLEPLRESLADHWASTESSPRLAALWE------SLLEDGLPEVAVGHPG-D 234

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           WG+ +P D    + +    +A+  +L   GY   P   +A      +H         HA+
Sbjct: 235 WGVPVPVDDFRHHRIDACFEAVVMHLFGYGYDHKPLPERA------VHFCEFGHAFCHAV 288

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV-IDPIEVIEEVGVDALRYFLVRE 332
             PA L++  + LP++++ +       E+     G   +  ++++ E G D LR  ++ E
Sbjct: 289 LLPAILIARGVKLPQEIYVNETYRVDAERAHGFGGEAGVWALDLLTEFGSDTLRRHVLEE 348

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G+   + +D L +R    L     N ++R  + + +D  G++P         E++  
Sbjct: 349 RPHGRRTEFRRDRL-ERTRQVLETTWNNWLTRLFTTVREDCAGVVPDAEPGGTGWEALRR 407

Query: 393 VCSRVLQEIRENMQNQLI--HRALAQVISLVS 422
              R  +++RE    +     RA+A +  +VS
Sbjct: 408 RLYRAAEDLREAYGPEAFDPRRAVAVLDEVVS 439


>gi|229043950|ref|ZP_04191644.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228725390|gb|EEL76653.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 607

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 87  VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 145

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 146 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 204

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 205 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKK 262

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 263 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 319

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 320 TISKLIAPFTPFVAEDI 336


>gi|313623634|gb|EFR93795.1| valyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 874

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 441 VLDTWFSSALWPFSTMGWPDTENPDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 500

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 501 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 559

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 560 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYDEIDLSNVTEVSDKWILTRLNETIQ 613

Query: 400 EI 401
            +
Sbjct: 614 AV 615



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 36  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 90

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F D        Y DFIR                 T +    D
Sbjct: 91  EAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 150

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 151 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 201


>gi|196045992|ref|ZP_03113220.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023047|gb|EDX61726.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 1033

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
            P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 APY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLINVYSFYVLYANLDEYNPHETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|319892709|ref|YP_004149584.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162405|gb|ADV05948.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464257|gb|ADX76410.1| valyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 876

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 38/218 (17%)

Query: 165 YFFRLSAYQDKLLSYYESHP--EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           +F +++   ++ L+  +++   EF+ P  R  +  +     ++D ++SR+ + WG +IP 
Sbjct: 359 WFVKMAPLAEQALNNQKTNGRIEFVPP--RFEKTFNRWMEEIRDWTISRQLW-WGHQIPA 415

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                    + ++  W  +     +T G+ +       +F+P +
Sbjct: 416 WYHNETGELYVGEEAPVDIENWTQDEDVLDTWFSSALWPFSTLGWPNEDAADYQRFYPTN 475

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFI-LHKGEKISKSLGNVIDP 313
           + V G DI+ F    W A ++   L    +     V  HG +    G K+SKSLGN +DP
Sbjct: 476 VLVTGYDIIFF----WVARMIFQGLEFTGQKPFNDVLLHGLVRAEDGRKMSKSLGNGVDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           ++VI++ G D+LRYFL    + G D  Y  + ++   N
Sbjct: 532 MDVIDQYGADSLRYFLATGSSPGHDLRYSTEKVESVWN 569



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 30/181 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D+L R  R+ G + L+  G D  G     K+    +
Sbjct: 38  TIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYETLYLPGMDHAGIATQAKVEAKMR 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106
             G++     D     F + A      Y  FIR                 T +       
Sbjct: 98  EEGISRH---DIGREKFLEKAWEWKEEYASFIRQQWAKLGLGLDYSRERFTLDSGLSQAV 154

Query: 107 RILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
           R ++  + +KG IY+G     W      A  + + V++  +G++Y   H    + + EGY
Sbjct: 155 RKVFVDMYNKGLIYRGERIINWDPAARTALSDIEVVHEDVNGKFY---HFKYPFADGEGY 211

Query: 166 F 166
            
Sbjct: 212 M 212


>gi|322385938|ref|ZP_08059579.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270053|gb|EFX52972.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+ +
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|317182405|dbj|BAJ60189.1| valyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 872

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSIAHLEN--NKNFANKIFNAVS 590



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           HIGHA  + + D+LAR+ R+DG   L+  G D  G     A QN  V  K  +DQ
Sbjct: 56  HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG----IATQN--VVEKQLLDQ 104


>gi|261867173|ref|YP_003255095.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412505|gb|ACX81876.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 862

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIAYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDKTVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 ELPQW 212


>gi|260576328|ref|ZP_05844319.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021399|gb|EEW24704.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 998

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 21/261 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    + T G+ + P     K++P  + V G+DIL F    W A ++  
Sbjct: 566 DPD-VLDTWFSSGLWPIGTLGWPE-PTPELQKYFPTSVLVTGQDILFF----WVARMMMM 619

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L +  ++  H   LH      KG+K+SKSLGNVIDP+E+I++ G DALR+      + G
Sbjct: 620 QLAVVGQIPFHTVYLHGLVRDAKGKKMSKSLGNVIDPLEIIDDYGADALRFANAAMASLG 679

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             G    D  +     +    + N      ++ + + +      P A    ++ I+   +
Sbjct: 680 --GVLKLDTQRIAGYRNFGTKLWNACRFAEMNGVWEGHQTRALPPQAKATVNQWIIGETA 737

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +V  E+   + +    +A A + + V     D Y +  KP      + D+A+        
Sbjct: 738 KVRAEVDAALADYRFDQAAAALYAFVWGKVCDWYVEFAKP----LFDGDQAAETRATMGW 793

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ Q  ILL   +P +  +++
Sbjct: 794 VLDQCMILLHPIMPFVTEELW 814



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+HR+ G D L+  G D           +AG+ T++ V++
Sbjct: 53 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGQD-----------HAGIATQMVVER 96


>gi|119899504|ref|YP_934717.1| leucyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166230607|sp|A1KAH5|SYL_AZOSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119671917|emb|CAL95831.1| unnamed protein product [Azoarcus sp. BH72]
          Length = 873

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 10/185 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  +   YP+ + H+GH     I DVLARFHR+ G +VL   G D  G     AA 
Sbjct: 32  RPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMRGYNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V     T   +D      + +   +D S +  + T    ++   + L+ ++ +KG I
Sbjct: 92  QNNVPPAKWTYANIDYMKGQLKRLGFAIDWSRE--VATCTPEYYRWEQWLFTRLFEKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V    DG+ + +    V+  E   Y+ +++AY D+LL  
Sbjct: 150 YKKLGTVNWDPVDETVLANEQVI---DGRGWRSGAL-VEKREIPMYYMKITAYADELLEA 205

Query: 180 YESHP 184
            +  P
Sbjct: 206 LDGLP 210


>gi|94676685|ref|YP_588685.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081495|sp|Q1LTM9|SYL_BAUCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94219835|gb|ABF13994.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 861

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DVL+R+HR+ G +V+   G D  G    +AA 
Sbjct: 32  KEKYYCLSMLPYPSGNLHMGHVRNYTIGDVLSRYHRMLGKNVMQPIGWDAFGLPAERAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +   N    +     L  SYD    I T    ++   +  + ++ +KG +Y 
Sbjct: 92  KNQTAPATWTYANIETMKKQLKQLGFSYDWSREITTCRPEYYRWEQWFFIQLYEKGLVYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  +  W S  D+    +++V  G   +       P+   +   +F +++AY D+LL
Sbjct: 152 KTSFVNWCS-NDQTVLANEQVIDGCCWRC----GAPIMLKDIPQWFLKITAYADQLL 203


>gi|289427161|ref|ZP_06428877.1| leucine--tRNA ligase [Propionibacterium acnes J165]
 gi|289159630|gb|EFD07818.1| leucine--tRNA ligase [Propionibacterium acnes J165]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAV 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|303228946|ref|ZP_07315756.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516360|gb|EFL58292.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 822

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+   H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  ESKEKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKKMNGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKKQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           YK      W         N+  +    DG  +    NPV+  +   +F R++ Y
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVI----DGLCWRCD-NPVEKKDLSQWFLRITEY 198



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 43/317 (13%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYL 239
           PE  LP+ R  E + F    +  L+ S    +        P       M  +ID+   +L
Sbjct: 450 PEDELPV-RLPEDVKFESGAVSPLATSEAFMNAKCPKCGGPARRETDTMDTFIDSSWYFL 508

Query: 240 TTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP 287
             T  L++    D   A +W   D ++ G +    H +Y   F        L+ AN P  
Sbjct: 509 RYTDALNDKAPFDSKIANYWMNVDQYIGGIEHAILHLLYSRFFVKVIHDLGLIEANEPF- 567

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +L +G K+SKS GNV+ P E+I + G D  R F++      +D  +   G++
Sbjct: 568 RGLLTQGMVLKEGSKMSKSKGNVVSPEEIINKYGADTARLFILFAAPVDRDLDWSDQGVE 627

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405
                    G    + R V  I+  YD        G  T+ + ++     RV++++ E++
Sbjct: 628 ---------GSYRFLGR-VWRIVDAYDQAAKENHTGDLTKDEVALRRELHRVIKKVTEDL 677

Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            N    + A++ ++ LV+ +  + D     + +  N D A+       E+   L +LL  
Sbjct: 678 DNNFNFNTAISAIMELVNAMYAHKD-----KAESVNADLAN-------ELTHNLVLLLAP 725

Query: 465 FVPKLANKIFDILFVAD 481
           FVP +  +++  L   D
Sbjct: 726 FVPHITEELWHELGETD 742


>gi|118477612|ref|YP_894763.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|166200197|sp|A0RDG3|SYI_BACAH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118416837|gb|ABK85256.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 1033

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
            P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 APY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLINVYSFYVLYANLDEYNPHETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMVGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|78223503|ref|YP_385250.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123770264|sp|Q39T99|SYL_GEOMG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78194758|gb|ABB32525.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 824

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ RF RL G +VL   G D  G     AA 
Sbjct: 32  KPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRLRGFNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +  +N    R     + +SY  D  + T +  ++   + ++ ++ +KG  Y 
Sbjct: 92  QHKSHPAKWTYENIAYMRSQLKKMGLSYDWDRELATCDLDYYKWEQKVFLEMYEKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y  W   + E    +++V    DG  +       Q  E E +FFR++ Y ++LL Y 
Sbjct: 152 KTSYVNWCP-KCETVLANEQV---EDGACWRCDSEVTQ-KELEQWFFRITDYAEELLEYT 206

Query: 181 E---SHPEFILPIER 192
           E     PE +L ++R
Sbjct: 207 EKLPGWPERVLTMQR 221



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 44/247 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D ++A++W   D ++ G +    H +Y   F         ++ + P    + + G ++  
Sbjct: 520 DKARAEYWMSVDQYIGGIEHAVLHLLYARFFTKALRDLGYVTVDEPF-TNLLTQGMVIKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP  +I   G D  R F +      KD  +   G+         +G  
Sbjct: 579 GAKMSKSKGNVVDPDALINRYGADTARLFSLFAAPPEKDLDWSDQGV---------DGSY 629

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILS--------VCSRVLQEIRENMQNQL-I 410
             +SR   ++      ++P  G     D + LS           + ++++ +++  +   
Sbjct: 630 RFLSRVWRLVCD----LLPFVGKGGAVDSASLSDDARGLRRAVHKTIRKVTDDIDERFHF 685

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A ++ LV+ +  +             P  A     V  E I  + I+L  FVP + 
Sbjct: 686 NTAIAAIMELVNAIYAF------------EPKNAPENGPVLTEAIESVVIMLSPFVPHVT 733

Query: 471 NKIFDIL 477
            ++++ L
Sbjct: 734 EELWEAL 740


>gi|189425175|ref|YP_001952352.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421434|gb|ACD95832.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 825

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA 
Sbjct: 34  RKKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    RD    + +SY  D  + T +  ++   + L+ ++  +G  YK
Sbjct: 94  KNNCHPAAWTYENMAYMRDQLKQMGLSYDWDRELATCDVSYYRWEQKLFLEMYKRGIAYK 153

Query: 122 G-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              +  W    +    N+    +  DG  +      VQ  E E +FF+++ Y ++LL + 
Sbjct: 154 KQSFVNWCPSCETVLANE----QVEDGGCWRCDTEVVQ-KELEQWFFKITDYAEELLDFT 208

Query: 181 E---SHPEFILPIER 192
                 PE +L ++R
Sbjct: 209 NKLPGWPERVLVMQR 223



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 111/243 (45%), Gaps = 37/243 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D ++A++W   D ++ G +    H +Y   F         +  + P    + + G ++  
Sbjct: 522 DKARAQYWMSVDQYIGGIEHAVLHLLYARFFTKVMRDLGYVDVDEPF-TNLLTQGMVIKD 580

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP  +I+  G D  R F +      KD  +++ G+         +G  
Sbjct: 581 GAKMSKSKGNVVDPDALIKRYGADTARLFSLFAAPPEKDLDWNEQGV---------DGCY 631

Query: 360 NLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             ++R   ++ +  + +   P     A ++ + ++     + L+++ E++  +   + A+
Sbjct: 632 RFLNRVWKLVHEQLEAVAAAPALDPSALSDEERTLRRAVHKTLKKVTEDIDERFHFNTAI 691

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ +          +  + N  +A+ V+   +E++    I+L  FVP +  +++
Sbjct: 692 AAVMELMNTL----------QGARLNTPQAAAVMKEALELV---VIMLAPFVPHITEELW 738

Query: 475 DIL 477
            +L
Sbjct: 739 QLL 741


>gi|322517283|ref|ZP_08070160.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124113|gb|EFX95652.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 901

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 461 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 520

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 521 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDMRFSY 579

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 580 EKMDASWN--FINKIWN-ISRYILM 601



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 58  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 112

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 113 EARLAEDGISR 123


>gi|322388625|ref|ZP_08062225.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140545|gb|EFX36050.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+ +
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|253576149|ref|ZP_04853481.1| isoleucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844492|gb|EES72508.1| isoleucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 1031

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 28/267 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ +       Y      + A+ +PAD+   G D  R  F+++   + L +   
Sbjct: 513 VIDVWFDSGSMPFAQHHYPFENQETFAEQFPADMICEGIDQTRGWFYSLLAVSTLFTGKA 572

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V + G +L   G+K+SKS GNVIDP E+I E G DA R+ L+ + A      + K
Sbjct: 573 PY-KAVIATGHVLDENGQKMSKSKGNVIDPWEIINEFGTDAFRWALLSDSAPWNSKRFSK 631

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQ 399
            G+     + + + + N  + +   +    DG  P   A+  S    D  ILS  + ++Q
Sbjct: 632 -GIVAEAKSKVVDTLVN--THAFLTLYAGIDGYKPEEHAYRPSENKLDRWILSRLNSLIQ 688

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---------NPDRASTVLYV 450
            + + +       A+   ++    ++ + D    W ++++         N D+ S    +
Sbjct: 689 VVDKGL-------AVNDFVNSSQAIEGFIDELSNWYIRRSRDRFWGSGLNEDKLSAYQTL 741

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           T  V+  ++ ++  F P +A  IF  L
Sbjct: 742 T-HVLLTVSKVIAPFAPLIAEDIFTNL 767



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PHIGH    +I D + R+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHIGHVLGRVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVEKELGISGKQEIEK 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T    + ++   +   I DKG
Sbjct: 110 YGIEEFVKKCKDSVFGYEKQWREFTEAIAYWVDLDDPYITLNNSYIESVWNILATIHDKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +Y+G     Y    +   +  EV +G
Sbjct: 170 LLYRGHRVSPYCPCCQTSLSSHEVAQG 196


>gi|189083248|sp|A0KN87|SYL_AERHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   S  +   D     +++V    D   +     PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLNDI 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DNLEGWPEMVKTMQR 221


>gi|94263197|ref|ZP_01287014.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93456415|gb|EAT06535.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+AR+ R+ G +V+   G D  G     AA 
Sbjct: 35  RAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVVHPMGWDAFGMPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     +  +N    R     L +SY  D  + T +  ++   ++ + K+  KG  Y+
Sbjct: 95  KHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFFLKMLKKGLAYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +    +    +++V  GA  +   A    V   + +G+F +++AY ++LL+  +
Sbjct: 155 KLTTVNWCETCQTVLANEQVINGACWRCDQA----VSQRQMQGWFLKITAYAEELLAGCD 210

Query: 182 S---HPEFILPIER 192
           +    PE +L ++R
Sbjct: 211 NLPGWPEKVLTMQR 224



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 34/241 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D   A +W P D ++ G +    H +Y   F         L+ + P    + + G ++  
Sbjct: 524 DKPAADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLAIDEPF-TNLLTQGMVIKD 582

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP E+IE+ G D +R F +      +D  ++  G++         G  
Sbjct: 583 GAKMSKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAF 633

Query: 360 NLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +SR    +L + + +       P A  E+D ++     + ++++ ++++N    + A+
Sbjct: 634 RFLSRIHRFVLDNREMLCAADEELPAAPNEADRALHRKTHQTIRKVSQDIENSFQFNTAI 693

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + V+ L + +     A          PD A     VT   ++ +  LL   VP L  +++
Sbjct: 694 SAVMELSNTLLSLNAAG-----ANQQPDPA-----VTRRAVQTMLTLLFPMVPHLCAELW 743

Query: 475 D 475
           +
Sbjct: 744 E 744


>gi|325696381|gb|EGD38272.1| valine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 25/268 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  
Sbjct: 440 DPD-VLDTWFSSALWPFSTMGWPDVNSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQ 494

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L        + V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G
Sbjct: 495 SLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPG 554

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDE 388
           +D  +  + +    N    N I N +SR + M        + +++   +    A   +D 
Sbjct: 555 QDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAREHVAQVAAGQAGNVTDR 611

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            IL   +  + ++ EN        A   + + + +   D Y +  K   L   N D    
Sbjct: 612 WILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVI 670

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIF 474
              V +  + Q+  LL   +P +  +IF
Sbjct: 671 TRSVLLYTLDQILRLLHPIMPFVTEEIF 698



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++           KV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLNKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|254993780|ref|ZP_05275970.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 885

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTENPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|290893953|ref|ZP_06556929.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556491|gb|EFD90029.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTENPDFKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM  +    T+    SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYSEIDLTKVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F D        Y +FIR                 T +    D
Sbjct: 100 EAKLKEENISRYDLGREKFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|194382482|dbj|BAG64411.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 118/284 (41%), Gaps = 57/284 (20%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   
Sbjct: 139 VLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 198

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +    
Sbjct: 199 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 258

Query: 126 GWYSLRDE--AYYNDDEVYKGA----------------DGQYYNA-----------QHNP 156
               LR E  A +  D   +G                  G+  NA           +  P
Sbjct: 259 ---QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCEVCRSCP 315

Query: 157 VQWMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKD 206
           V  ++   + F        RL  +  + L  S +  + +FI          S+++ GLK 
Sbjct: 316 V--VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKP 365

Query: 207 LSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDN 247
             ++R    WG  +P +     + YVW DA   YL+ T  Y D 
Sbjct: 366 RCITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQ 408


>gi|94266584|ref|ZP_01290267.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93452779|gb|EAT03314.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+AR+ R+ G +V+   G D  G     AA 
Sbjct: 35  RAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVVHPMGWDAFGMPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     +  +N    R     L +SY  D  + T +  ++   ++ + K+  KG  Y+
Sbjct: 95  KHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFFLKMLKKGLAYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +    +    +++V  GA  +   A    V   + +G+F +++AY ++LL+  +
Sbjct: 155 KLTTVNWCETCQTVLANEQVINGACWRCDQA----VSQRQMQGWFLKITAYAEELLAGCD 210

Query: 182 S---HPEFILPIER 192
           +    PE +L ++R
Sbjct: 211 NLPGWPEKVLTMQR 224



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 34/241 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D   A +W P D ++ G +    H +Y   F         LS + P    + + G ++  
Sbjct: 524 DKPAADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLSIDEPF-TNLLTQGMVIKD 582

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP E+IE+ G D +R F +      +D  ++  G++         G  
Sbjct: 583 GAKMSKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAF 633

Query: 360 NLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +SR    +L + + +       P A  E+D ++     + ++++ ++++N    + A+
Sbjct: 634 RFLSRIHRFVLDNREMLCAADEELPAAPNEADRALHRKTHQTIRKVSQDIENSFQFNTAI 693

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + V+ L + +     A          PD A     VT   ++ +  LL   VP L  +++
Sbjct: 694 SAVMELSNTLLSLNAAG-----ANQQPDPA-----VTRRAVQTMLTLLFPMVPHLCAELW 743

Query: 475 D 475
           +
Sbjct: 744 E 744


>gi|217964301|ref|YP_002349979.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333571|gb|ACK39365.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571133|emb|CAR84312.1| valyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 884

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 451 VLDTWFSSALWPFSTMGWPDTENPDFKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 510

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 511 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM  +    T+    SD+ IL+  +  +Q
Sbjct: 570 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYSEIDLTKVTEVSDKWILTRLNETIQ 623

Query: 400 EI 401
            +
Sbjct: 624 AV 625



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 46  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 100

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F D        Y +FIR                 T +    D
Sbjct: 101 EAKLKEENISRYDLGREKFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 160

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 161 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 211


>gi|193783837|dbj|BAG53819.1| unnamed protein product [Homo sapiens]
          Length = 546

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 56/277 (20%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      A   G+
Sbjct: 268 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGL 327

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   D+      D+    +IS+D F RTT  +     + +++++  +G + +      
Sbjct: 328 TPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE-- 385

Query: 128 YSLRDE--AYYNDDEVYKGA----------------DGQYYNA-----------QHNPVQ 158
             LR E  A +  D   +G                  G+  NA           +  PV 
Sbjct: 386 -QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPV- 443

Query: 159 WMEEEGYFF--------RLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKDLS 208
            ++   + F        RL  +  + L  S +  + +FI          S+++ GLK   
Sbjct: 444 -VQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFI--------TRSWLRDGLKPRC 494

Query: 209 LSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           ++R    WG  +P +     + YVW DA   YL+ T 
Sbjct: 495 ITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITA 530


>gi|146318113|ref|YP_001197825.1| valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320294|ref|YP_001200005.1| valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751303|ref|YP_003024444.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753204|ref|YP_003026344.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755027|ref|YP_003028167.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|145688919|gb|ABP89425.1| Valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691100|gb|ABP91605.1| Valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815592|emb|CAZ51175.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817491|emb|CAZ55232.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819449|emb|CAR44947.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557873|gb|ADE30874.1| Valyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
 gi|319757585|gb|ADV69527.1| valyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIPFWVSRMIFQGIEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             GVT           KV  + D+ +   R+    L +S  D+ R   T ++      R 
Sbjct: 100 EQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSL-DYQRDRFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|46907782|ref|YP_014171.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|47093088|ref|ZP_00230865.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224153|ref|YP_002758260.1| valyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824389|ref|ZP_05229390.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852176|ref|ZP_05241524.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931492|ref|ZP_05264851.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255521286|ref|ZP_05388523.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764782|ref|ZP_07074772.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403272|sp|Q71ZB6|SYV_LISMF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46881051|gb|AAT04348.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018528|gb|EAL09284.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876615|emb|CAS05324.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258605480|gb|EEW18088.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583044|gb|EFF95076.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593624|gb|EFG01385.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514458|gb|EFK41515.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328465587|gb|EGF36816.1| valyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTENPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|324524450|gb|ADY48415.1| Methionyl-tRNA synthetase [Ascaris suum]
          Length = 157

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           +S  RK  +WGI +P D    +YVW+DAL NYLT +G+      S  ++WP    VIGKD
Sbjct: 50  ISRDRKRLEWGIAVPHDHTQTIYVWMDALMNYLTVSGF----PNSHYEYWPPTWQVIGKD 105

Query: 267 ILRFHA 272
           IL   A
Sbjct: 106 ILNLLA 111


>gi|322372403|ref|ZP_08046939.1| valine--tRNA ligase [Streptococcus sp. C150]
 gi|321277445|gb|EFX54514.1| valine--tRNA ligase [Streptococcus sp. C150]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+     
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLA 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +G++      + F+D+             + +  M   +D S + F  T ++      R
Sbjct: 100 ESGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 205


>gi|293391011|ref|ZP_06635345.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951545|gb|EFE01664.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 862

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L  SY  D  + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIAYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDKTVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 ELPQW 212


>gi|289448092|ref|ZP_06437836.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A]
 gi|289421050|gb|EFD18251.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A]
          Length = 876

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 439 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 492

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 493 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 552

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 553 LRFTLARGASPGGDLAVSEDAVRASRNF----GTKLFNATRYALLNGAAPAPLPSPNELT 608

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 609 DADRWILGRLEDVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 662

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 663 QGLTHTTAVLAAGLDTLLRLLHP 685



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69
           H+GHA E  + D L R  R+ G +VL+  GTD  G        Q++A   K  ++ G   
Sbjct: 50  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 107

Query: 70  KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           ++FVD+                R + D +D S D F  T ++      R ++K++ D G 
Sbjct: 108 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 165

Query: 119 IYKG 122
           IY+ 
Sbjct: 166 IYRA 169


>gi|317407733|gb|EFV87662.1| IleS protein [Achromobacter xylosoxidans C54]
          Length = 953

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 15/203 (7%)

Query: 230 VWIDALTNYLTTTGYLDNP-DGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D    GS      WPADL++ G D  R  FH+      +L    
Sbjct: 546 VWFDSGSTHATVLGGKDGDFAGSHGAELGWPADLYLEGSDQHRGWFHSSLLTGCMLYGQP 605

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQE 400
             + KRV  +    I N + R +   L D+D +   +P  G   E D   L++ +++  E
Sbjct: 665 --ILKRV-VEGYRRIRNTL-RFLLANLADFDAVSQSVPY-GELFEIDRYALAMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
           ++ + +    H A++++ +  SE
Sbjct: 720 VQGHYERYDFHPAVSRLQTFCSE 742



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 22/174 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K    A V +K        +D+  ++F+ +  VL      ++        D  R
Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLG-VLGEWDRPYMTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
            L   I DKG +++G      C+    +L +      D V    D  +  A+H 
Sbjct: 164 AL-GHILDKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAVDVAFPFAEHG 216


>gi|228478388|ref|ZP_04062996.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250067|gb|EEK09337.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|257387116|ref|YP_003176889.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169423|gb|ACV47182.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 1089

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 40/323 (12%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA- 253
           E +   K  + DL+++     +  ++PD    +  VW+D+    + T G +D P  ++A 
Sbjct: 511 ETVDLHKDTVDDLTITEDGVTYE-RVPD----VFDVWLDSA---VATWGTIDYPSETEAF 562

Query: 254 -KFWPADLHVIGKDILRFHAIYWPAFLL--SANLPLP-KKVFSHGF-ILHKGEKISKSLG 308
            + WPADL +   D  R    +W    +  +A    P ++V  HG  ++  G  +SKS  
Sbjct: 563 DELWPADLIIEAHDQTR--GWFWSQLGMGTAAVGASPYERVVMHGHALMPDGRAMSKSRD 620

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNA-------DLANGI 358
             +DP EVI++ G D +R FL+   A G+D  +  DG   +++R+N         L    
Sbjct: 621 IRVDPGEVIDDYGADPMRAFLLSLAARGEDMNFSYDGTEEMQRRLNILWNVFRFPLPYMR 680

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHR 412
            +  S  V+   +  +G     G   +      +DE +LS    V  E  E M+      
Sbjct: 681 MDGFSPRVATESQRSEGGDAAEGTGIDDVTLDLADEWVLSRLQTVEAEATEAMEEFRQDD 740

Query: 413 ALAQVISLVSE-VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVP 467
           A+  ++  V E V RY+     ++ WE   +   RA+   Y T+  V+R++  LL  F P
Sbjct: 741 AIEGILDFVVEDVSRYYVQLVRERMWEEDDSESKRAA---YATLYRVLREVVALLAPFTP 797

Query: 468 KLANKIFDILFVADENRCFQSLD 490
            +A +I+  L    E+      D
Sbjct: 798 FVAEEIYGTLTGESEHPTVHMCD 820



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 20/103 (19%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  +      Y +   H+GHA+   + DV  R+ R+ G DV    G D HG  I      
Sbjct: 41  EDFFFVDGPPYTSGSAHMGHAWNKSLKDVYIRYKRMCGYDVTDRPGYDMHGLPI------ 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               TKV   +  + FR+  D+     ++F+        D CR
Sbjct: 95  ---ETKV---EEEKEFRNKKDIEAFGVENFV--------DACR 123


>gi|253701290|ref|YP_003022479.1| valyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776140|gb|ACT18721.1| valyl-tRNA synthetase [Geobacter sp. M21]
          Length = 888

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 149/351 (42%), Gaps = 49/351 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ +++   ++ L   +     I+P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WYVKVAPLAERALGAVKDGRTKIVPQQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWY 419

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      DDP                ++  W  +     +T G+ +      A F+
Sbjct: 420 CDHCGHITVAKDDPTCCDECGSDEIRQETDVLDTWFSSALWPFSTMGWPEKTP-ELASFY 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNV 310
           P    V G DIL F    W A ++   L    +V      +H      +G+K+SKS GNV
Sbjct: 479 PTSCLVTGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVRDAQGQKMSKSKGNV 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ VI+  G DA R+ L    A G+D    ++ +    N   AN I N  SR   M L
Sbjct: 535 IDPLTVIDAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMMNL 591

Query: 371 KDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
           + +D   + P     + +D  IL   ++    +   + +   + A   +     SE  D 
Sbjct: 592 EGFDPNAVDPASLKLSNADRWILYRLNQTTVSVDAALASFRFNEAANDLYRFTWSEFCDW 651

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K  +L K + DR ++  YV   V+  L  LL  F+P +  +I+  L
Sbjct: 652 YIELAKD-DLYKGDADRQASAKYVLWLVLENLLRLLHPFMPFITEEIWQAL 701


>gi|119504404|ref|ZP_01626484.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459912|gb|EAW41007.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 863

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 9/193 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y      YP+ + H+GH     IADV+AR+ R+ G +VL   G D  G     AA  
Sbjct: 81  EKFYCLAMFPYPSGKLHMGHVRNYTIADVIARYQRMQGKNVLQPMGWDAFGLPAENAAIA 140

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +   N    R     L  +YD    + T +  ++   +  + ++ ++G  YK 
Sbjct: 141 NQVPPADWTLDNIAEMRSQLSRLGFAYDWSREVTTCQPDYYRWEQWFFTRLLERGLAYKK 200

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V    DG+ +    NPV+      +F R++AY  +LL   +S
Sbjct: 201 EAEVNWCENDQTVLANEQV---VDGKCWRCD-NPVERKAISQWFIRITAYAQELLDDLDS 256

Query: 183 ---HPEFILPIER 192
               PE ++ ++R
Sbjct: 257 LTEWPEQVVAMQR 269



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH +     L++++ P  +++ + G +L  G K+SKS GN +DP E+I+  G D +R F
Sbjct: 592 FHKLLRDEGLVNSDEPF-RRLLTQGMVLKDGTKMSKSRGNTVDPQELIDRYGADTVRLF 649


>gi|289523084|ref|ZP_06439938.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503627|gb|EFD24791.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 895

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 17/230 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308
           F+P  L V G DI+ F    W A ++   L     +P K V+ H  +   KG+K+SKS G
Sbjct: 479 FYPTSLLVTGFDIIFF----WVARMIMMGLKFMDDVPFKDVYIHALVRDEKGQKMSKSKG 534

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP+++I + G D+LR+ L      G+D F     ++        N I N  +R   M
Sbjct: 535 NVIDPVDIINQYGADSLRFTLSSLTVQGRDIFLSTQKIES--CRHFMNKIWN-AARFALM 591

Query: 369 ILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424
            L D+D    +    +    D  I+   ++V +E+ + ++      A   +   V     
Sbjct: 592 NLGDFDESRTMEFDDSLRLHDRWIVMRVNQVTKEVTDLIEGYFFGEASKMLYDFVWGELC 651

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  KP         R      V   V +++ +LL  F+P +  +++
Sbjct: 652 DWYIEMSKPALRGDEGSKRKIASQKVLYYVFKKVLLLLHPFIPFITEELW 701


>gi|42521981|ref|NP_967361.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|60390711|sp|Q6MQU3|SYL_BDEBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39574511|emb|CAE78015.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 796

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 43/232 (18%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-GEKI 303
           K+W P DL+V G +    H +Y   W   L    L     P  +K+   G IL   GEK+
Sbjct: 512 KYWMPVDLYVGGPEHTVGHLLYARFWTKVLFDCGLVTHDEPF-QKLAHQGMILGPDGEKM 570

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVI P ++    G DALR F+       KD  +   G+         +G+   + 
Sbjct: 571 SKSRGNVISPEDIARSHGADALRTFISFMGPVDKDKPWAPTGI---------DGVKRFLD 621

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   +++ D   ++ T  A T   E ++    + ++++ E++++   + A++ ++ LV+E
Sbjct: 622 RITRLVVNDDGQLVATSEALTPEIEKLV---HKTIKKVTEDIESMSFNTAISAMMILVNE 678

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + R                   +VL      ++ L  +L  F P LA ++++
Sbjct: 679 LYRA---------------ECRSVL-----AVKPLVQILAPFAPHLAEELWE 710



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 9/179 (5%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+A   H+GH       D+++R+ R++G +VL   G D  G    + A
Sbjct: 30  KPKYYALDMFPYPSASGLHVGHMASYTPGDIISRYKRVNGFNVLHPMGYDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV   +   +   +FR        S+D    I T E  ++   + ++ K+ ++G  Y
Sbjct: 90  IQTGVHPAITTKKAIDSFRKTLQTFGFSFDWSREISTCEPDYYKWTQFIFLKLYERGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W         ND+ V    DG+     H PV  +  + +  +++ Y ++LL+
Sbjct: 150 QKEVPVNWCPALKTVLANDEVV----DGKSERGGH-PVIRVPMKQWMLKITDYAERLLN 203


>gi|289167262|ref|YP_003445529.1| valyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288906827|emb|CBJ21661.1| valyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|51245648|ref|YP_065532.1| valyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826816|sp|Q6AMA0|SYV_DESPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50876685|emb|CAG36525.1| probable valyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 887

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 160/395 (40%), Gaps = 66/395 (16%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           LR++ Y  + E Y  A G  Y  +        +QW      F  +     K +       
Sbjct: 329 LREQGYLVEIEDYDHAVGHCYRCKTVIEPTTSLQW------FVSVKPLAAKAVDAVRDGQ 382

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY---- 226
             I P    N   S++ + ++D  +SR+ + WG +IP              +DP      
Sbjct: 383 INIYPKTWYNTFYSWMDN-IRDWCISRQIW-WGHRIPAWSCADCGELIVETEDPTSCPKC 440

Query: 227 ----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
                     ++  W  +     +T G+ +N    +  F+P  + +   DIL F    W 
Sbjct: 441 GSSKLSQETDVLDTWFSSALWPFSTMGWPENTKELQT-FYPTSVLITSFDILFF----WV 495

Query: 277 AFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L L      K V+ H  +  K G+K+SKS GNVIDP+E++ + G D++R+ L 
Sbjct: 496 ARMMMMGLHLMDEVPFKDVYLHALVRDKHGKKMSKSTGNVIDPLEIMAQYGTDSMRFTLT 555

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTES 386
              A G++   D+D ++   +    N I N  +R   M + D D  I     TP      
Sbjct: 556 AFAAQGREIKLDEDRIEGYRH--FINKIWN-AARFAQMHIGDCDDSIRVAVETPKDLALG 612

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPD 442
              ILS  +++++ I  +++  L +   +     + +   D Y +  K   +       D
Sbjct: 613 HRWILSRTAKLVEGIHRSLRGYLFNEVASLNYQFIWKEFCDWYLEWIKSDLFSDDLVARD 672

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +A   L V +E I +    L    P +  +I+ +L
Sbjct: 673 QARGCLMVVLETILK---TLHPITPFVTEEIWSVL 704



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAK---A 61
           S  I  PN     H+GHA    + D+L R+HR+ G + ++  GTD  G   Q + +   A
Sbjct: 42  SIVIPPPNVTGVLHVGHALNNTLQDILVRYHRMCGDNTMWIPGTDHAGIATQNVVERQLA 101

Query: 62  AQNAG---VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +  G   +  + F+++  +             + +    D   + F  T ++    + R
Sbjct: 102 TEGKGRHDLGREAFIERVWKWREDKGGTIVNQLKKIGSSCDWERERF--TMDEGLSTSVR 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  +G IYKG Y   +  R +    DDEV ++ + G+ Y+ ++
Sbjct: 160 EVFVRLYKEGLIYKGDYIVNWCPRCQTALADDEVEHEDSKGKLYHIRY 207


>gi|312864262|ref|ZP_07724496.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100263|gb|EFQ58472.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|325977658|ref|YP_004287374.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177586|emb|CBZ47630.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|315101253|gb|EFT73229.1| leucyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPVSTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|269115081|ref|YP_003302844.1| Leucyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322706|emb|CAX37441.1| Leucyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 805

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 57/276 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS---------KAKF--W-PADLHVIGKDILRFHAIY 274
           +M  W  +   YL     L NPDGS         K +F  W P DL++ G++    H +Y
Sbjct: 486 VMPQWAGSSWYYLAYI--LKNPDGSYTPLNSSEAKKRFEEWMPVDLYIGGQEHAVLHLLY 543

Query: 275 ---WPAFLLSANLPLPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
              W  FL    +   K+ F+     G I+   G+K+SKSLGNVI+P + I   G D+LR
Sbjct: 544 ARFWHRFLFDLGIVNTKEPFTKLINQGLIMGPDGQKMSKSLGNVINPDDFILSHGADSLR 603

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            +         + F       K  + D  NGI     R +  I   ++  +        S
Sbjct: 604 VY---------EMFMGPLVESKSWSTDSLNGI----RRWIEKIYNIFEYFVKGNIDINNS 650

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           +  ++S  ++++ E+ EN++    + A+++++   + +             KT P     
Sbjct: 651 NNELISNINKLILEVSENIEKTKFNIAISKMMVFTNYLTSL----------KTIPSSF-- 698

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                  V++Q AILL  F P LA    ++LF+ +E
Sbjct: 699 -------VLKQFAILLSPFAPFLAE---ELLFMLNE 724



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 19/202 (9%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K YI     YP+    H+GH       D++AR+ RL+G DVL   G D  G    + A
Sbjct: 28  NKKAYILDMFPYPSGMGLHVGHLEGYTATDIIARYKRLNGFDVLHPIGWDAFGLPAEQYA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG--- 117
              G   + F  +N  NFR     +  S  YD  + TT+ + +   + ++K++  +G   
Sbjct: 88  IKTGNDPEPFTLKNIANFRRQLQAMGFSYDYDKEVNTTDPKFYIWTQWIFKEMYKQGLAS 147

Query: 118 ----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D+   C      L +E     + +     G +   +    QW+       +++AY 
Sbjct: 148 IEEIDV-NWCEGLGTVLANEEILEKNGIKVSERGNFPVVKKPMKQWV------LKITAYA 200

Query: 174 DKLLSYYE--SHPEFILPIERR 193
           DKLL   E    PE +  ++R 
Sbjct: 201 DKLLEGLEDLDWPESLKQLQRN 222


>gi|307103633|gb|EFN51891.1| hypothetical protein CHLNCDRAFT_56341 [Chlorella variabilis]
          Length = 905

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 56/225 (24%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           E +F R+       L    S    ILP +R  +V +F    +KD  +SR+ + WG +IP 
Sbjct: 349 EQWFVRMEPLAKPALEAVASGAIRILP-DRFEKVYNFWLDNIKDWCISRQLW-WGHRIPV 406

Query: 222 ----DDP---------------------------QY-----------IMYVWIDALTNYL 239
               DD                            QY           ++  W  +     
Sbjct: 407 WYVFDDEAAAAAAASSERYVVAKSEGEARDRAVQQYGPDVVLKQESDVLDTWFSSGLWPF 466

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHG 294
           +T G+  N      +++P  +   G DIL     +W A ++   L     P    V+ HG
Sbjct: 467 STLGW-PNATPDLERYYPTAVMETGHDIL----FFWVARMIMMGLECTGRPPFHTVYLHG 521

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +   KG K+SKSLGNV+DP+E I++ G DALR+ L    + G+D
Sbjct: 522 LVRDEKGRKMSKSLGNVVDPVETIQQYGADALRFTLATGTSPGQD 566


>gi|72026470|ref|XP_798583.1| PREDICTED: similar to MGC69150 protein, partial [Strongylocentrotus
           purpuratus]
 gi|115925072|ref|XP_001197290.1| PREDICTED: similar to MGC69150 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 549

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G     +++ DV +RF RL   + L+  GTDE+G      A 
Sbjct: 112 KNILITSALPYVNNVPHLGTIIGCVLSGDVFSRFCRLRNYNTLYICGTDEYGTATETKAL 171

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+T +   D+     RD+    +I +D F RTT ++  +  + ++ ++   G I
Sbjct: 172 EEGLTPQQICDKYHALHRDIYKWFNIDFDHFGRTTTQKQTEIAQDIFHRLHAAGHI 227



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 17/214 (7%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAK 254
           S+V+ GLK   ++R    WG  +P       + YVW DA   Y + T  Y D  +    K
Sbjct: 332 SWVRDGLKPRCITRD-LKWGTPVPLKGYTDKVFYVWYDAPIGYPSITANYTDQWE----K 386

Query: 255 FWPADLHV-----IGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSL 307
           +W     V     + KD + FH++ +P+ L+ AN    +   + +  ++ ++  K SKS 
Sbjct: 387 WWKNPQQVQLYNFMAKDNVPFHSVIFPSCLIGANDNYTMVNHLIATEYLNYEDTKFSKSR 446

Query: 308 G-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  V         +  D  R++L+      +D  +       + N++L N +GN ++RSV
Sbjct: 447 GIGVFGDNAQSTGIPADIWRFYLLYIRPETQDSAFSWADFVWKNNSELLNNLGNFINRSV 506

Query: 367 SM-ILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  L++  G +         DE +++  +R L+
Sbjct: 507 GLTFLENSFGSVIPEIRLESEDERLIAEINRELK 540


>gi|330469644|ref|YP_004407387.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812615|gb|AEB46787.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 872

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 18/234 (7%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSA-NLPLPKKVFS-HGFILHK-GEKISKSLGN 309
           AKF+P  + V G DIL F       F L A +   P  V + HG +  + G+K+SKS GN
Sbjct: 475 AKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGKQPFDVIALHGMVRDEHGKKMSKSFGN 534

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+DP++ I+  G DA R+ L R    G D    +D  +   N    N + N  +R   + 
Sbjct: 535 VVDPLDWIDRYGADATRFTLARGANPGGDVPVSEDWCQGSRN--FCNKLWN-ATRFALLN 591

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------ 423
                G +P     +  D  ILS  ++V  E+ E  +        A+V  L+        
Sbjct: 592 GAHTAGALPGAAELSTVDRWILSRLAQVTAEVDEQFEAY----EFAKVCDLLYHFAWDDV 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  KP  +       A T   V   V+ QL  LL   +P +  +++  L
Sbjct: 648 CDWYVELSKP--VLAAGGAAADTSRRVLGHVLDQLLRLLHPVIPFVTEELWTAL 699


>gi|314978351|gb|EFT22445.1| leucyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|315088782|gb|EFT60758.1| leucyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKVIDS 707


>gi|313838589|gb|EFS76303.1| leucyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 24/190 (12%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +  +A+++ LV+   +  D+         +P     V + TV+ +  +A       P
Sbjct: 685 GRYNVVVARIMELVNATRKAIDSG----CGPADPAVREAVTF-TVQALSLVA-------P 732

Query: 468 KLANKIFDIL 477
            LA +++++L
Sbjct: 733 YLAEEMWEML 742


>gi|313764602|gb|EFS35966.1| leucyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|314915596|gb|EFS79427.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918448|gb|EFS82279.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314919937|gb|EFS83768.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314931951|gb|EFS95782.1| leucyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955818|gb|EFT00218.1| leucyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|327450925|gb|EGE97579.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453725|gb|EGF00380.1| leucyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328754347|gb|EGF67963.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328754923|gb|EGF68539.1| leucyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPVSTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|307710391|ref|ZP_07646831.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618868|gb|EFN98004.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGFAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|306832917|ref|ZP_07466049.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424816|gb|EFM27950.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|288904741|ref|YP_003429962.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731466|emb|CBI13020.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|116252545|ref|YP_768383.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384698|sp|Q1MFI6|SYL1_RHIL3 RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA
           ligase 1; Short=LeuRS 1
 gi|115257193|emb|CAK08288.1| putative leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 838

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y      YP+ A  H+GH       D++ R+ R+ G +VL   G D  G    + A
Sbjct: 30  RPKFYALDMFPYPSGAGLHVGHPLGYTATDIMCRYKRMRGFNVLHPMGWDSFGLPAERHA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              GV   +   +N   FR     L  SYD   +F  TT+  +    + ++ K+ + G  
Sbjct: 90  MRTGVHPDITTKRNIETFRGQVQRLGFSYDWSREFA-TTDPAYVRWTQWIFLKLFENGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+   +  +     A   D+EV    DG+Y     +PV       +  R++AY D+LL
Sbjct: 149 YQAEVAVNWCPAQNAVLADEEV---KDGRYVETG-DPVIRRRMRQWMLRITAYADRLL 202



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 30/177 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P +V+ + G DALR +   E+  G       D  K    A +  G+  
Sbjct: 607 EKMSKSQLNVVNPDDVVHQFGADALRLY---EMFMGP-----LDAAKPWQTAGVI-GVRR 657

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R+  ++  + DG+ P       S + +L +  + ++ +  +++    + A+++++ L
Sbjct: 658 FLERAWRIVCDESDGLSPVVLEAAPSPQ-LLRLRHQTVKTVTADIEAIRFNTAVSRLMEL 716

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +    +A +P                   EV+    +LL  F P +A +++  L
Sbjct: 717 ANALTA--EAARP------------------REVVETFVLLLAPFAPHIAEELWSKL 753


>gi|313820181|gb|EFS57895.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823011|gb|EFS60725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|314925410|gb|EFS89241.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKTIDS 707


>gi|303245563|ref|ZP_07331846.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492826|gb|EFL52691.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 837

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 26/203 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+ARF R++G +VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYCIGDVVARFKRMEGNNVLHPMGWDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISD 115
              +    +   N  + R     L  SYD       +R   TC        +  + K+ +
Sbjct: 91  KHKLHPAAWTLSNIESMRTQIKRLGYSYD------WRRELATCHPDYYVHEQRFFLKLLE 144

Query: 116 KGDIYKGCYS--GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           KG +Y+  YS   W         N+  +    DG  +     PV   + E +F R++AY 
Sbjct: 145 KGLVYRK-YSPQNWCETCGTVLANEQVI----DGCCWRCDQ-PVVQKDLEQWFLRITAYA 198

Query: 174 DKLL----SYYESHPEFILPIER 192
           ++LL          PE +L ++R
Sbjct: 199 EELLDDLAQLVGGWPERVLTMQR 221



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 49/319 (15%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PE  LP+E   + +S +  G   L +S+   D    +   P        D L  +  ++ 
Sbjct: 453 PEKDLPVELPRD-LSLLPDGRSPLPVSKSFTDVACPVCGGPARRE---TDTLDTFFESSW 508

Query: 244 YL---------DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANL 284
           Y          D P D    K+W P D ++ G +    H +Y   F+        L+ + 
Sbjct: 509 YFIRFASARDRDRPFDPEATKYWLPVDQYIGGIEHAILHLLYSRFFVKALRDLGYLTFDE 568

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + + G ++  G K+SKS GNV+DP ++I + G D +R F++      KD  +   
Sbjct: 569 PF-ANLLTQGMVIKDGSKMSKSKGNVVDPDDMIAKYGADTVRVFILFAAPPEKDLDWSDT 627

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--------PGAFTESDESILSVCSR 396
           G++    +   + +  LV+  ++ +L       P         P  F E      +  ++
Sbjct: 628 GIEG--ASRFLSRLWRLVTEELAAVLSPVAACAPAGELGQGGLPELFAELRRREHATAAK 685

Query: 397 VLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
              +IRE  Q N  I  A+  V  L + V          E  K+ P  A  V       +
Sbjct: 686 AGADIRERFQFNTAIAAAMELVNFLYANV----------ETLKSEPKGAKAV----SSAV 731

Query: 456 RQLAILLQAFVPKLANKIF 474
             L  +L    P +  +++
Sbjct: 732 ATLLTVLSPIAPHICEELW 750


>gi|302343431|ref|YP_003807960.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640044|gb|ADK85366.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 881

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 151/390 (38%), Gaps = 61/390 (15%)

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G    RDE  +N    Y+          H  V+ +  + +F ++    ++ L   +    
Sbjct: 332 GLLERRDEHMHNVGHCYRC---------HTMVEPILSKQWFVKVGPLAEEALKAVQDGRT 382

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDPQY------ 226
            I+P E   +      +G++D  +SR+ + WG +IP              DP        
Sbjct: 383 RIVP-EVWTKTYYDWMTGIRDWCISRQIW-WGHRIPAWYCQCGQVIVSRQDPTVCPACGA 440

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D     K KF+P    V   DIL     +W A 
Sbjct: 441 DQLRRESDVLDTWFSSALWPFSTMGWPDQTAELK-KFYPTSCLVTAFDIL----FFWVAR 495

Query: 279 LLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L        K V+ H  +  + G+K+SKS GNVIDP+ V+++ G DA+R+ L   
Sbjct: 496 MMMMGLKFMGEAPFKDVYIHALVRDEHGQKMSKSKGNVIDPLVVMDQFGTDAVRFTLAAF 555

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDES 389
            A G+D    ++ +    N    N I N    ++  +  D+   +G+ P        D  
Sbjct: 556 AAQGRDVKLSEERIAGYRN--FVNKIWNAARFTLMHLEGDHQRPEGLEP-----LLEDRW 608

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS   RV  E    +     + A   V         D Y +  K       +P R +  
Sbjct: 609 ILSRVGRVADEAALAIDEYRFNDAAGAVYQFAWHEFCDWYLELIKGPLYNDADPARQAAT 668

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +V  +L  LL  F+P +  +++  L
Sbjct: 669 RATLRQVFSRLIRLLHPFMPFVTEELWQRL 698



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN   Q HIGHA    + D+L RF R++G +VL+  GTD  G
Sbjct: 41 SIVIPPPNVTGQLHIGHALNNTLQDILCRFKRMNGWEVLWMPGTDHAG 88


>gi|171778747|ref|ZP_02919843.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282704|gb|EDT48128.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|145298097|ref|YP_001140938.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166230606|sp|A4SJW8|SYL_AERS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|142850869|gb|ABO89190.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 858

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   S  +   D     +++V    D   +     PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDMTVLANEQV---VDNCCWRCD-TPVEQKEIPQWFIKITDYAEELLNDI 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DNLEGWPEMVKTMQR 221


>gi|332178820|gb|AEE14509.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 8/178 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K+YI     YP+   H+GH     I DV+AR++R+   +VL   G D  G     A
Sbjct: 29  KGNKKMYILEMFPYPSGNLHMGHVRNYTIGDVVARYYRMKSYNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N  N +   + L ISY  D  + T    ++   + L+ +   KG +
Sbjct: 89  AIKYGVHPYEWTIKNIENMKRQLNSLGISYDWDREVATCFPDYYKWNQWLFLQFYKKGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y K     W         N+    +  +G+ +  + + V+  E E +FFR++ Y ++L
Sbjct: 149 YKKKSKVNWCPQCKTVLANE----QAEEGRCWRCK-SEVELKELEQWFFRITNYAEEL 201



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 34/249 (13%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEK 302
           KAKFW   D ++ G +    H +Y   F+        L+ + P    + + G +L  GEK
Sbjct: 526 KAKFWMSVDQYIGGVEHAVLHLLYSRFFVKVLRDLGFLNIDEPF-SNLLTQGMVLKDGEK 584

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN++DP E+I   G D  R F++      KD  +   G++   +  LA  I  L 
Sbjct: 585 MSKSKGNIVDPEEIISTYGADTARLFILFAAPPEKDLEWSDQGVEG-AHRFLAR-IWKLF 642

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
           + ++  I K+ +  +      TE + +I    ++ L +   +++N+   + ++A ++   
Sbjct: 643 NENLERI-KNVEASVEED--LTEDEVNIYKKLNKTLLKASNDIENKFHFNTSIAALMEFT 699

Query: 422 SEVDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +E       +K  P  +KK               +     I+L  F P ++ +I+  +  
Sbjct: 700 NEFSYSLRNEKIRPKLIKK---------------IFETFTIILSVFAPHISEEIWSRMGH 744

Query: 480 ADENRCFQS 488
            D   CFQ+
Sbjct: 745 TDL-VCFQN 752


>gi|314958300|gb|EFT02403.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPVSTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|313801759|gb|EFS42993.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313816139|gb|EFS53853.1| leucyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313827958|gb|EFS65672.1| leucyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|314962951|gb|EFT07051.1| leucyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314967975|gb|EFT12074.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315098391|gb|EFT70367.1| leucyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315108477|gb|EFT80453.1| leucyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 826

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|258621973|ref|ZP_05717002.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258585726|gb|EEW10446.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 894

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 29/246 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 68  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 181

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY  +
Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 237

Query: 176 LLSYYESH---PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           LL   ++    PE +  ++R    R+E +  +K  +KD +   + +      PD    + 
Sbjct: 238 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVE-LKFAVKDENTDLEVY---TTRPDTLMGVT 293

Query: 229 YVWIDA 234
           YV I A
Sbjct: 294 YVGIAA 299


>gi|320546286|ref|ZP_08040606.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449063|gb|EFW89786.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|308048542|ref|YP_003912108.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630732|gb|ADN75034.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 859

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRLQGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L   YD    + T +  ++   +  + ++ +KG IYK
Sbjct: 92  KNKSAPGPWTYENIEYMKGQLKMLGFGYDWSRELATCKPDYYRWEQWFFTELYNKGLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +     PV   E   +F +++ Y D+LLS   
Sbjct: 152 KTSAVNWCENDQTVLANEQV---VDGCCWRCD-TPVVQKEIPQWFIKITDYADQLLSDMD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 QLEGWPEMVKTMQR 221


>gi|306830739|ref|ZP_07463903.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304427086|gb|EFM30194.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 883

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|260187457|ref|ZP_05764931.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 886

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 34/263 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++  
Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDK-TAELEKFYPTSVLVTGYDIL----FFWVARMMMF 502

Query: 281 ------SANLPLPKK---------VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
                  A + L  +         VF HG I    G K+SKS GNVIDP++ +E  G DA
Sbjct: 503 GTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADA 562

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R  + G D    +D ++   N     G     +   +++       +P+P   T
Sbjct: 563 LRFTLARGASPGGDLAVSEDAVRASRN----FGTKLFNATRYALLNGAAPAPLPSPNELT 618

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           ++D  IL     V  E+          RA   +       D + D    W L+      A
Sbjct: 619 DADRWILGRLEDVRAEVDSAFDGYEFSRACESLYHFA--WDEFCD----WYLELAKTQLA 672

Query: 445 STVLYVTVEVIRQLAILLQAFVP 467
             + + T  +   L  LL+   P
Sbjct: 673 QGLTHTTAVLAAGLDTLLRLLHP 695



 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 26/124 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA---KAAQNAGVTT 69
           H+GHA E  + D L R  R+ G +VL+  GTD  G        Q++A   K  ++ G   
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLG--R 117

Query: 70  KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           ++FVD+                R + D +D S D F  T ++      R ++K++ D G 
Sbjct: 118 ELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGL 175

Query: 119 IYKG 122
           IY+ 
Sbjct: 176 IYRA 179


>gi|228907943|ref|ZP_04071794.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228851702|gb|EEM96505.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 1033

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  V+   G D HG
Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88


>gi|295130455|ref|YP_003581118.1| leucine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376678|gb|ADE00533.1| leucine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313772360|gb|EFS38326.1| leucyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807371|gb|EFS45858.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313809880|gb|EFS47601.1| leucyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313825061|gb|EFS62775.1| leucyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313830793|gb|EFS68507.1| leucyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834011|gb|EFS71725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314973218|gb|EFT17314.1| leucyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314975890|gb|EFT19985.1| leucyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314983642|gb|EFT27734.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987590|gb|EFT31681.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990075|gb|EFT34166.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315084461|gb|EFT56437.1| leucyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315096127|gb|EFT68103.1| leucyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327326046|gb|EGE67836.1| leucine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327332082|gb|EGE73819.1| leucine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327443287|gb|EGE89941.1| leucyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327446071|gb|EGE92725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327447947|gb|EGE94601.1| leucyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328753613|gb|EGF67229.1| leucyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760453|gb|EGF74021.1| leucine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 826

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|157413338|ref|YP_001484204.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980079|sp|A8G4T7|SYL_PROM2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157387913|gb|ABV50618.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 856

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH    +I D++ARFHR  G  VL   G D  G     AA  
Sbjct: 44  DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFHRFKGKSVLHPMGWDAFGLPAENAAIE 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G++  V+  QN  + R    +L +S  +D    T ++ ++   + L+ ++   G +Y+ 
Sbjct: 104 RGISPSVWTKQNISHMRSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLVYQK 163

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                +   D     +++V   ++G+ + +    V+    + +F R++ Y D+LL
Sbjct: 164 ESEVNWDPVDNTVLANEQV--DSEGKSWRSGA-VVEKKLLKQWFLRITNYADELL 215



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 26/178 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359
           EK+SKS  N IDP  VI++ G D  R F++ +    KD  + D D            G  
Sbjct: 621 EKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDTD----------VEGQF 670

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   + +     +     ++ + ++S++   +  ++EI  ++ N   + A      
Sbjct: 671 RFLNRIWKLYINCAKDINSKSNSYPDREKSLIKSMNIAIKEISNDILNNQFNTA------ 724

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +SE+ +++++     L  +  D  +T   + +E ++   ILL  F P +A +I+ ++
Sbjct: 725 -ISELMKFYNS-----LANSINDVNNT---LKIEALKTFCILLAPFAPHIAEEIWHLI 773


>gi|33592821|ref|NP_880465.1| isoleucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81425095|sp|Q7VXK3|SYI_BORPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33572469|emb|CAE42039.1| isoleucyl-tRNA synthetase [Bordetella pertussis Tohama I]
          Length = 953

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 13/202 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D   G        WPADL++ G D  R  FH+      +L  + 
Sbjct: 546 VWFDSGSTHATVLGGKDGVLGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGHP 605

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401
             + KRV  +    I N + R +   + D+D  G     G   E D   L++ +++  E+
Sbjct: 665 --ILKRV-VESYRRIRNTL-RFLLANVADFDAVGQAVPYGELFEIDRYALAMTAQMQAEV 720

Query: 402 RENMQNQLIHRALAQVISLVSE 423
           + + +    H A++++ +  SE
Sbjct: 721 QGHYERYDFHPAVSRLQTFCSE 742



 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K      V +K        +D+  ++F+ +  VL   ++ ++        D  R
Sbjct: 105 IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLG-VLGDWHNPYLTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG 122
           +L  +I +KG +++G
Sbjct: 164 VL-GRILEKGYVFRG 177


>gi|282891964|ref|ZP_06300443.1| hypothetical protein pah_c200o137 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498224|gb|EFB40564.1| hypothetical protein pah_c200o137 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 957

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 145/400 (36%), Gaps = 101/400 (25%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+S +  KL    ES    ++P    N    ++ + L+D  +SR+ + WG +IP   
Sbjct: 370 WFVRMSEFGKKLRHIIESKQVTLIPKNWENTYFHWIDN-LRDWCISRQLW-WGHRIPIWT 427

Query: 222 --DDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
             +DP+                          ++  W  +      T G+ +N    K K
Sbjct: 428 NKNDPEKRICYDGEGVPPEVEANPDDWTQDDDVLDTWFSSSLWPFATLGWPENTPELK-K 486

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL----------- 297
           F+P  + + G DIL F    W A ++          P P+  F HG I            
Sbjct: 487 FYPNSVLITGHDILFF----WVARMIFMGDYAMGEPPFPE-TFLHGLIYGKSYWRDAPGG 541

Query: 298 ------------------------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                   +K EK+SKS GN+IDP+E+IE+ G DA+R  L    
Sbjct: 542 GIAYLSEKERMEYDLGKPLPSDVHYKWEKMSKSKGNIIDPLEIIEQYGTDAMRMAL---- 597

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------- 385
            C       +  L +R   DL N   N +      +L +  G    P    +        
Sbjct: 598 -CVSATQAREIDLDRRRFEDLKN-FANKIWNGARFVLMNLKGNEHNPALTAQEFSQGVNF 655

Query: 386 -----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                 D  ILSV +RV++ + + +      +A  +            Y +  KP  + K
Sbjct: 656 SLLALEDRWILSVLNRVIKSVEQKLTTYQFDQAAQEAYDFFWRDFCSYYLEIAKPVLMGK 715

Query: 439 TN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  P   S    +   ++ Q   L+    P +  ++F  L
Sbjct: 716 SGLPGERSNKQKLLAIILCQAIRLMHPMAPFITEELFHAL 755



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 25/115 (21%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D+L R+ R+ G + L+  GTD           +AG+ T+  V++N    
Sbjct: 61  HMGHALVNTLQDILIRWKRMQGFETLWIPGTD-----------HAGIATQTVVERNLMKT 109

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK----GCYSGWYSLR 131
                V D S +DF++  +          WK  S+K  +++    GC   W  LR
Sbjct: 110 EGKRRV-DYSREDFLQRVQN---------WKDESEKVILHQLKSLGCSCDWSRLR 154


>gi|257886337|ref|ZP_05665990.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257822193|gb|EEV49323.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEV 424
            ++E 
Sbjct: 683 FINEA 687


>gi|254382766|ref|ZP_04998123.1| valyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341668|gb|EDX22634.1| valyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 792

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 8/153 (5%)

Query: 253 AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           AKF+  D+ V G DI+ F     + +  + +   +P  K +   G +   +G+K+SKS G
Sbjct: 397 AKFYSTDVLVTGHDIIFFWVARMMMFGLYAMDGEVPF-KTIALTGLVRDERGKKMSKSFG 455

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV+DP++ +++ G DA+R+ L +    G D    +D ++   N   AN I N  +R   M
Sbjct: 456 NVVDPLDWMDKYGSDAVRFTLAKGANPGTDVPIGEDWVQASRN--FANKIWN-ATRFALM 512

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                +G +P P   + +D  ILS  ++ + ++
Sbjct: 513 NGATVEGELPAPEEMSATDRWILSRLNKTVSQV 545


>gi|33601155|ref|NP_888715.1| isoleucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81431251|sp|Q7WKD5|SYI_BORBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33575590|emb|CAE32668.1| isoleucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 953

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 13/202 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ + + T  G  D   G        WPADL++ G D  R  FH+      +L  + 
Sbjct: 546 VWFDSGSTHATVLGGKDGVLGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYGHP 605

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR ++      G+    D+
Sbjct: 606 PY-KGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGELSISDE 664

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401
             + KRV  +    I N + R +   + D+D  G     G   E D   L++ +++  E+
Sbjct: 665 --ILKRV-VESYRRIRNTL-RFLLANVADFDAVGQAVPYGELFEIDRYALAMTAQMQAEV 720

Query: 402 RENMQNQLIHRALAQVISLVSE 423
           + + +    H A++++ +  SE
Sbjct: 721 QGHYERYDFHPAVSRLQTFCSE 742



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K      V +K        +D+  ++F+ +  VL   ++ ++        D  R
Sbjct: 105 IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLG-VLGDWHNPYLTMNFSNEADEIR 163

Query: 108 ILWKKISDKGDIYKG 122
           +L  +I +KG +++G
Sbjct: 164 VL-GRILEKGYVFRG 177


>gi|313813083|gb|EFS50797.1| leucyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 826

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|257888996|ref|ZP_05668649.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897590|ref|ZP_05677243.1| leucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257825059|gb|EEV51982.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257834155|gb|EEV60576.1| leucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 40/238 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++E                    A  V  +  E I     LL    P +  +++ IL
Sbjct: 683 FINE--------------------AYKVDALPYEYIEGFVQLLAPIAPHMGEELWSIL 720


>gi|189083224|sp|A9WS85|SYL_RENSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 862

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 20/217 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           +E+ Y+     YP+   H+GHA   ++ DV+ R+ +L G DVL   G D  G     AA 
Sbjct: 69  KERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFDVLHPVGWDSFGLPAENAAI 128

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA     T   ++  + +F+  A  + + +   ++T++  ++   + L+ +  ++G  
Sbjct: 129 KRNAHPAEWTYANIETQAASFKRYA--IGVDWSRRLQTSDPEYYRWTQWLFLRFYERGLA 186

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-- 177
           Y+      +  +D     +++V  GA          PV       ++F+++ Y D+LL  
Sbjct: 187 YRKNSPVNWCPKDLTVLANEQVINGA----CERCGTPVTKKNLNQWYFKITDYADRLLDD 242

Query: 178 -SYYESH-PEFILPIER------RNEVISFVKSGLKD 206
            +  E H PE +L ++R      +   + FV  G+ D
Sbjct: 243 MAQLEGHWPERVLAMQRNWIGRSQGAHVDFVIDGMSD 279



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 35/245 (14%)

Query: 240 TTTGYLDNP-DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+  Y D P D + A  W   D +V G +    H +Y   F        LL A  P  K 
Sbjct: 556 TSPEYTDGPFDPAAATRWMGVDQYVGGVEHAILHLLYSRFFVKVLNDLGLLEAKEPF-KA 614

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L+ G+ +SKSLGN +D  + ++  GVDA+R  +V   A   +   D   +   
Sbjct: 615 LLNQGQVLNGGKAMSKSLGNGVDLSQQLDRFGVDAVRLTMV--FASPPEDDVDWADVSPS 672

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            +A        L     S I     G+ P  G     D ++ SV  R L E  + +    
Sbjct: 673 GSAKFLARAWRLAQDVTSEI-----GVDPATG-----DRALRSVTHRTLSEAADLIDAHK 722

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +  +A+ + LV+   +  D+         +P           E +  +A++L  F P  
Sbjct: 723 FNVVVAKTMELVNITRKSIDSG----CGPADP--------AVREAVEAVAVILSLFAPYT 770

Query: 470 ANKIF 474
           A  I+
Sbjct: 771 AEDIW 775


>gi|163840682|ref|YP_001625087.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954158|gb|ABY23673.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 898

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 20/217 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           +E+ Y+     YP+   H+GHA   ++ DV+ R+ +L G DVL   G D  G     AA 
Sbjct: 105 KERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFDVLHPVGWDSFGLPAENAAI 164

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA     T   ++  + +F+  A  + + +   ++T++  ++   + L+ +  ++G  
Sbjct: 165 KRNAHPAEWTYANIETQAASFKRYA--IGVDWSRRLQTSDPEYYRWTQWLFLRFYERGLA 222

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-- 177
           Y+      +  +D     +++V  GA          PV       ++F+++ Y D+LL  
Sbjct: 223 YRKNSPVNWCPKDLTVLANEQVINGA----CERCGTPVTKKNLNQWYFKITDYADRLLDD 278

Query: 178 -SYYESH-PEFILPIER------RNEVISFVKSGLKD 206
            +  E H PE +L ++R      +   + FV  G+ D
Sbjct: 279 MAQLEGHWPERVLAMQRNWIGRSQGAHVDFVIDGMSD 315



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 35/245 (14%)

Query: 240 TTTGYLDNP-DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+  Y D P D + A  W   D +V G +    H +Y   F        LL A  P  K 
Sbjct: 592 TSPEYTDGPFDPAAATRWMGVDQYVGGVEHAILHLLYSRFFVKVLNDLGLLEAKEPF-KA 650

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L+ G+ +SKSLGN +D  + ++  GVDA+R  +V   A   +   D   +   
Sbjct: 651 LLNQGQVLNGGKAMSKSLGNGVDLSQQLDRFGVDAVRLTMV--FASPPEDDVDWADVSPS 708

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            +A        L     S I     G+ P  G     D ++ SV  R L E  + +    
Sbjct: 709 GSAKFLARAWRLAQDVTSEI-----GVDPATG-----DRALRSVTHRTLSEAADLIDAHK 758

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +  +A+ + LV+   +  D+         +P           E +  +A++L  F P  
Sbjct: 759 FNVVVAKTMELVNITRKSIDSG----CGPADP--------AVREAVEAVAVILSLFAPYT 806

Query: 470 ANKIF 474
           A  I+
Sbjct: 807 AEDIW 811


>gi|72119932|gb|AAZ62195.1| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 888

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 51  KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 110

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 111 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 168

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y ++LL
Sbjct: 169 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAI-VEKREIPMYYLRITDYAEELL 224

Query: 178 S 178
            
Sbjct: 225 G 225


>gi|327330752|gb|EGE72498.1| leucine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 826

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|293553706|ref|ZP_06674329.1| leucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602132|gb|EFF32361.1| leucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEV 424
            ++E 
Sbjct: 683 FINEA 687


>gi|159039402|ref|YP_001538655.1| valyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918237|gb|ABV99664.1| valyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 872

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 27/261 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSA 282
           ++  W  +     +T G+ +  PD   AKF+P  + V G DIL F     + +  + +  
Sbjct: 450 VLDTWFSSALWPFSTLGWPEQTPD--LAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDG 507

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P    V  HG +  + G+K+SKS GNV+DP++ I+  G DA R+ L R    G D   
Sbjct: 508 RQPF-DVVALHGMVRDEHGKKMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGGDVSV 566

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            ++  +   N    N + N  +R   +      G +P+    +  D  ILS  + V  E 
Sbjct: 567 SEEWCQGSRN--FCNKLWN-ATRFALLNGAHTQGAMPSATELSTVDRWILSRLAHVTAEA 623

Query: 402 RENMQ--------NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            E  +          L H A  +V       D Y +  KP  L    P  A T   V   
Sbjct: 624 DEQFEAYEFGKVCELLYHFAWDEV------CDWYVELTKP-TLAGGGP-AADTTRRVLGH 675

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ QL  LL   +P +  +++
Sbjct: 676 VLDQLLRLLHPVIPFVTEELW 696


>gi|313837330|gb|EFS75044.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927996|gb|EFS91827.1| leucyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971714|gb|EFT15812.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907122|gb|EGG26888.1| leucine--tRNA ligase [Propionibacterium sp. P08]
          Length = 826

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  KERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +  +N    + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIGTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y KG ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKGSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 26/208 (12%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+SD ++  V  R + +I E +++
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDVDL------TQSDATLRQVTHRSIADITELLES 684

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +  +A+V+ LV+   +  D+         +P     V +         A  L    P
Sbjct: 685 GRYNVVVARVMELVNATRKAIDSG----CGPADPAVREAVTFT--------AQALSLVAP 732

Query: 468 KLANKIFDILFVADE--NRCFQSLDQRL 493
            LA ++++IL +     N  + + DQ+L
Sbjct: 733 YLAEEMWEILGLEPSVANSHWPTADQKL 760


>gi|289425157|ref|ZP_06426934.1| leucine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154135|gb|EFD02823.1| leucine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 826

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDMDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|150401370|ref|YP_001325136.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166229747|sp|A6UVK2|SYI_META3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150014073|gb|ABR56524.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 1040

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 117/230 (50%), Gaps = 17/230 (7%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314
           AD  V G D +   F++ +  + ++  ++P  KK   HGF L + GEK+SKS+GNV++P 
Sbjct: 559 ADFIVEGNDQVTKWFYSQHALSEIVFDDIPY-KKCMMHGFTLDETGEKMSKSIGNVVNPD 617

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDY 373
           +V+EE G D LR++L+      +D  +    +       + N + N  S +V+ M+L D+
Sbjct: 618 DVVEEFGADLLRFYLLSANKAWEDLRFSIGEMNDV--KSVFNTLWNSYSFAVNYMVLDDF 675

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA-- 430
                      + D+ I+S  + + +E  E ++   +H    +V   + +++ R++    
Sbjct: 676 SPNEEYFNYLRDEDKWIISKINSLTKEAIEVLEIPHLHEYTWKVRDFILNDLSRWYIKLI 735

Query: 431 -QKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             + W ++K +PD+ S    LY    V+ +L ++L    P ++ KI+  L
Sbjct: 736 RNRTW-MEKEDPDKLSAYQTLYY---VLMKLVVILAPVAPHISEKIYQNL 781


>gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 845

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y      YP+ + H+GH     I DVLAR+  L G +VL   G D  G     A
Sbjct: 29  KSKKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKSLQGYNVLHPMGWDSFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   ++ K + + N  N +     L +S  +D  I T    ++   +  + ++ DKG +
Sbjct: 89  ARQNNLSPKDWTESNISNMKSQLKRLGLSIDWDREISTCSVDYYKHQQEFFLELYDKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +   D+    +++V  G  G    AQ   V+  +   +FF ++ + ++LL
Sbjct: 149 YRKEQDVNWDPVDQTVLANEQVIDGK-GWRSGAQ---VERKKLNQWFFNITKFSNELL 202



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 33/187 (17%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            E +SKS  N IDP  +I   G D++R F++ +    KD  + ++G+    +      + 
Sbjct: 613 SESMSKSKKNTIDPENIINNYGADSVRLFILSDSPPEKDVQWSEEGI--AASHKFIQKLW 670

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN---QLIHRALAQ 416
            L  + +  I KDY           ++ + ++   ++ +++I  N++N    +I   L +
Sbjct: 671 TLHRKIIEEISKDYS---------EDASDELIKFTNKFIKKISNNLENFSYNIIVANLHE 721

Query: 417 VIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + S L++E+ + +              + ST+L    +  +++ I +   +P L+N+   
Sbjct: 722 MYSFLINEIGKGY--------------KKSTIL----DNYKKILITMNPIIPHLSNECLK 763

Query: 476 ILFVADE 482
           I+   D+
Sbjct: 764 IIENTDK 770


>gi|261416197|ref|YP_003249880.1| isoleucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372653|gb|ACX75398.1| isoleucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326943|gb|ADL26144.1| isoleucine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 1061

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 17/234 (7%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVID 312
           PAD    G D  R    ++   +LS  L   P  K V  +G IL + G K+SKS  N  D
Sbjct: 559 PADFIAEGLDQTR--GWFYTLTVLSNALFQKPAFKNVIVNGIILAEDGSKMSKSKRNYPD 616

Query: 313 PIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLK---KRVNADLANGIGNLVSRSVSM 368
           P ++IE  G DA+R F++   A   +D  + ++G+K   K+V   L N +   VS   + 
Sbjct: 617 PNDLIERTGADAIRLFMINSAALKAEDLRFSEEGVKGIVKQVMLPLWNAVAFFVSNHNAD 676

Query: 369 ILKDYDGMIPTPGAFTESDESI----LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             K    +   PG   +SD  +    L+    +  ++   M+   ++  +  VI+ V ++
Sbjct: 677 AAKGQ--LTWKPGQEVKSDNELDRWMLATLQDLAAKVEVEMKAYRLYNVVPAVIAAVDDL 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             ++  +      K+  D      Y T+ +V+   + +L  F+P LA +I+ IL
Sbjct: 735 TNWYVRRSRRRFWKSENDGDKNAAYATMYKVLVDFSKILAPFLPLLAEEIYQIL 788


>gi|75760445|ref|ZP_00740486.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74492070|gb|EAO55245.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  V+   G D HG
Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88


>gi|257900327|ref|ZP_05679980.1| leucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257838239|gb|EEV63313.1| leucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEV 424
            ++E 
Sbjct: 683 FINEA 687


>gi|206975087|ref|ZP_03236001.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217959724|ref|YP_002338276.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229138915|ref|ZP_04267494.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|206746508|gb|EDZ57901.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067167|gb|ACJ81417.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228644540|gb|EEL00793.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|163854090|ref|YP_001642133.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665695|gb|ABY33062.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 906

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+     +W A
Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L L  +       LH      KG K+SKS GNV+DP+++I+  G DALR+ L  
Sbjct: 518 RMMMMGLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577

Query: 332 EIACGKD 338
             A G+D
Sbjct: 578 LAAPGRD 584



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    I D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERK 96


>gi|69244089|ref|ZP_00602625.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Enterococcus faecium DO]
 gi|257880449|ref|ZP_05660102.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883262|ref|ZP_05662915.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891521|ref|ZP_05671174.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894538|ref|ZP_05674191.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614095|ref|ZP_05711865.1| leucyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562448|ref|ZP_05832958.1| leucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206894|ref|ZP_05921584.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289567063|ref|ZP_06447460.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293563981|ref|ZP_06678388.1| leucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293569437|ref|ZP_06680733.1| leucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294613887|ref|ZP_06693825.1| leucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619132|ref|ZP_06698624.1| leucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294622191|ref|ZP_06701256.1| leucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314943342|ref|ZP_07850117.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949258|ref|ZP_07852604.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314953916|ref|ZP_07856774.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993194|ref|ZP_07858575.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997356|ref|ZP_07862313.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68196546|gb|EAN10972.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Enterococcus faecium DO]
 gi|257814677|gb|EEV43435.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818920|gb|EEV46248.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827881|gb|EEV54507.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830917|gb|EEV57524.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073133|gb|EEW61478.1| leucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260078872|gb|EEW66573.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161142|gb|EFD09045.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587857|gb|EFF19709.1| leucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291593252|gb|EFF24823.1| leucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594618|gb|EFF26003.1| leucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598288|gb|EFF29380.1| leucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604071|gb|EFF33598.1| leucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313588570|gb|EFR67415.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592308|gb|EFR71153.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594115|gb|EFR72960.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313597954|gb|EFR76799.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313644357|gb|EFS08937.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEV 424
            ++E 
Sbjct: 683 FINEA 687


>gi|293571995|ref|ZP_06683008.1| leucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607919|gb|EFF37228.1| leucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEV 424
            ++E 
Sbjct: 683 FINEA 687


>gi|240141544|ref|YP_002966024.1| valine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240011521|gb|ACS42747.1| valine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 906

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+     +W A
Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L L  +       LH      KG K+SKS GNV+DP+++I+  G DALR+ L  
Sbjct: 518 RMMMMGLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577

Query: 332 EIACGKD 338
             A G+D
Sbjct: 578 LAAPGRD 584



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    I D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGRDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERK 96


>gi|158321607|ref|YP_001514114.1| leucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980073|sp|A8MJY6|SYL_ALKOO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158141806|gb|ABW20118.1| leucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 802

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++EK Y      YP+ Q  H+GH       DV++R  RL+G +VL+  G D  G     
Sbjct: 29  KDKEKFYALIEFPYPSGQGLHVGHPRPYTALDVVSRKRRLEGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  KV  +QN   F+     L +S+D    I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAIKNKIHPKVVTEQNVARFKKQLQGLGMSFDWSREINTTDPEYYKWTQWIFLKLFEKGL 148

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            YK   S  W +       N++ V  G +    +    Q N  QWM       +++ Y +
Sbjct: 149 AYKKEMSINWCTSCKVGLANEEVVNGGCERCGAEVVRKQKN--QWM------LKITEYAE 200

Query: 175 KLLS 178
           +L++
Sbjct: 201 RLIN 204



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFIL-HKGEKIS 304
           +W P D +  G +    H +Y   W  FL    +     P  K+  SHG IL    EK+S
Sbjct: 524 YWMPIDWYNGGMEHTTLHLLYSRFWHKFLYDCGVVPSCEPYQKRT-SHGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P +++ E G D LR +
Sbjct: 583 KSRGNVINPDDIVTEFGADTLRLY 606


>gi|227550269|ref|ZP_03980318.1| leucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180594|gb|EEI61566.1| leucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 837

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 62  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 121

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 122 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 181

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 182 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 235

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 236 DDLELVDWPESIKEMQR 252



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 40/238 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 547 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 606

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 607 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 657

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 658 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 715

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++E                    A  V  +  E I     LL    P +  +++ IL
Sbjct: 716 FINE--------------------AYKVDALPYEYIEGFVQLLAPIAPHMGEELWSIL 753


>gi|15644113|ref|NP_229162.1| isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6226709|sp|P46213|SYI_THEMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4981921|gb|AAD36431.1|AE001790_3 isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 919

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)

Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VWID+  ++   TT   D+P       +P D+++ G D  R  FH+  + A     + P 
Sbjct: 526 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 578

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            K+V +HGFI   +G K+SKSLGNV+DP+EV+E+ G + LR +L
Sbjct: 579 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 621


>gi|228900803|ref|ZP_04065018.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|228858729|gb|EEN03174.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N  PH+GHA    I D++AR+  + G  V+   G D HG
Sbjct: 50 NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHG 88


>gi|207092570|ref|ZP_03240357.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 643

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N  S
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAAS 590



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|314940361|ref|ZP_07847523.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313640401|gb|EFS04981.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 804

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 574 NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 625 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 682

Query: 420 LVSEV 424
            ++E 
Sbjct: 683 FINEA 687


>gi|293377848|ref|ZP_06624032.1| putative leucyl-tRNA synthetase [Enterococcus faecium PC4.1]
 gi|292643532|gb|EFF61658.1| putative leucyl-tRNA synthetase [Enterococcus faecium PC4.1]
          Length = 486

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+   +  W         N++ +   ++   Y+    P+ QWM       +++AY D+LL
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYDVVRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 DDLELVDWPESIKEMQR 219


>gi|116872981|ref|YP_849762.1| valyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741859|emb|CAK20983.1| valyl-tRNA synthetase, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 882

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P +  V G DI+ F    + + +   +   
Sbjct: 449 VLDTWFSSALWPFSTMGWPDTENQDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401
           + ++   N    N I N  SR V M L D     I        SD+ IL+  +  +Q +
Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNLNDMKYSEIDLTKVSEVSDKWILTRLNETIQAV 623



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR       F D        Y DFIR                 T +    D
Sbjct: 99  EAKLKENNISRYDLGREKFIDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDDGLSD 158

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 159 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209


>gi|161611254|ref|YP_297039.2| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|189083223|sp|Q46XD8|SYL_RALEJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 873

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 36  KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 153

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y ++LL
Sbjct: 154 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAI-VEKREIPMYYLRITDYAEELL 209

Query: 178 S 178
            
Sbjct: 210 G 210


>gi|197117146|ref|YP_002137573.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690875|sp|B5EE39|SYL_GEOBB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197086506|gb|ACH37777.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 824

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  RKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    R     L +SY  D  + T +  ++   + ++ ++  KG  YK
Sbjct: 92  QHKSHPAKWTYENIAYMRGQLKTLGLSYDWDRELATCDLDYYKWEQRIFLEMYKKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +  + E    +++V    DG  +    +PVQ  E E + FR++ Y  +LL    
Sbjct: 152 KSSAVNWCPKCETVLANEQV---EDGCCWRCD-SPVQQKELEQWSFRITNYAQELLDDTY 207

Query: 179 YYESHPEFILPIER 192
                PE +L ++R
Sbjct: 208 KLTGWPERVLTMQR 221



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKG 300
           D  K + W P D ++ G +    H +Y   F      L   N+  P   + + G ++  G
Sbjct: 520 DREKVEAWMPVDQYIGGIEHAVLHLLYARFFTKVLRDLGYCNVDEPFSNLLTQGMVIKDG 579

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP  +IE  G D  R F +      KD  +   G+         N +  
Sbjct: 580 AKMSKSKGNVVDPNALIERYGADTARLFSLFAAPPEKDLDWSDQGVDGSYR--FLNRVWR 637

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           LV   + +I    D     PG      + +     + ++++ E+++ +   + A+A V+ 
Sbjct: 638 LVYDVLPVI---GDAGAVNPGELGAEAKKLRRAVHKTIKKVSEDVEERFHFNTAIAAVME 694

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           LV+ + + F A       K  P+  + V      V+R    LL  FVP  A +++
Sbjct: 695 LVNAI-QAFSA-------KDAPENVAVVREAVESVVR----LLAPFVPNFAEELW 737


>gi|71083652|ref|YP_266372.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|90101540|sp|Q4FM20|SYV_PELUB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71062765|gb|AAZ21768.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 875

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 22/275 (8%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           ++K ++  + +  DP  ++  W  +      T G+ DN +    KF+P  + V G DI+ 
Sbjct: 433 AKKFYNKDVDLIRDPD-VLDTWFSSGLWPFATLGWPDNKEYVD-KFYPTSVLVTGFDIIF 490

Query: 270 FHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           F    W A ++   +    K     V+ H  +   KG+K+SKS GNVI+P+++IE+   D
Sbjct: 491 F----WVARMIMFGMEFLDKEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIEKYSAD 546

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           ALR+ L+   + G D    +D +K   N    L N    L++ +      D+  +   P 
Sbjct: 547 ALRFTLLSMASPGTDVKLSEDRVKGYRNFLNKLWNANNFLITNNC-----DFSKIDEKPI 601

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT 439
                ++ I +       +I +N+++     A          S  D Y +  K   L   
Sbjct: 602 LSININKWIYAELIETKNKIEKNLKDYRFDEAAKNAYQFTWHSYCDWYLELSKT-ILFSE 660

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +      V  V+  V +Q+ ILL  F+P +  +I+
Sbjct: 661 DEKAKDEVRQVSAYVFKQILILLHPFIPFVTEEIW 695



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 26/129 (20%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + K   S  I  PN     H+GHA    I D+L R+HR++  + L+  GTD         
Sbjct: 29  KNKKQFSVVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTD--------- 79

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118
             +AG+ T+  V++  +   D  D  +I  + FI      ++ H D      KK+     
Sbjct: 80  --HAGIATQALVEK--KLTADGIDKNEIGREKFIEKVWEWKEEHGDIILNQLKKL----- 130

Query: 119 IYKGCYSGW 127
              GC   W
Sbjct: 131 ---GCSCDW 136


>gi|297617834|ref|YP_003702993.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145671|gb|ADI02428.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 825

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 20/192 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y      YP+   H+GH     I DV+ARF  ++G +VL   G D  G     A
Sbjct: 30  KTKPKYYDLEMFPYPSGNLHMGHVRNYAIGDVVARFKTMNGYNVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G+   ++ D N  N +     L ISYD   +F  T +  ++   + L+ K+ + G 
Sbjct: 90  AIKHGIHPSIWTDSNIENMKRQLKSLGISYDWTREFA-TCKPEYYRFTQWLFLKLYENGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            YK       C S    L +E   + D    G            V+    E +FF+++ Y
Sbjct: 149 AYKKKAAVNWCPSCATVLANEQVVDGDCERCGTR----------VEKKSLEQWFFKITDY 198

Query: 173 QDKLLSYYESHP 184
            ++LL+  +  P
Sbjct: 199 AERLLNDLDKLP 210



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 33/245 (13%)

Query: 246 DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGF 295
           D P D     +W P D ++ G +    H +Y   F        L+S   P    + + G 
Sbjct: 517 DRPWDKEAVDYWMPVDQYIGGVEHAILHLMYSRFFTKVLYDLGLVSCEEPF-TNLLTQGM 575

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  G K+SKS GN + P ++I   G D  R F++      KD  +   G++        
Sbjct: 576 VLKDGAKMSKSKGNTVSPEDIINTYGADTARLFILFASPPEKDLEWSDQGVEGCYR--FL 633

Query: 356 NGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412
           N +  LV+   + +  ++ Y G        + +D  +       ++++ E+++ +   + 
Sbjct: 634 NRVWRLVAEYSNQVRGVEAYGG----GSNLSAADRELRYRTHFTIKKVTEDIEKRFNFNT 689

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A++ ++ LV+ + +Y D +                L V  E ++ L ++L  F P +A +
Sbjct: 690 AISAIMELVNALYQYKDNEH-------------QNLAVVKEALKALVLVLSPFSPHIAEE 736

Query: 473 IFDIL 477
           +++ +
Sbjct: 737 LWEAI 741


>gi|229121748|ref|ZP_04250969.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228661664|gb|EEL17283.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|170289257|ref|YP_001739495.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176760|gb|ACB09812.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 920

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)

Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VWID+  ++   TT   D+P       +P D+++ G D  R  FH+  + A     + P 
Sbjct: 527 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 579

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            K+V +HGFI   +G K+SKSLGNV+DP+EV+E+ G + LR +L
Sbjct: 580 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 622


>gi|148270551|ref|YP_001245011.1| isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166229777|sp|A5IML2|SYI_THEP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|147736095|gb|ABQ47435.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 919

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)

Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VWID+  ++   TT   D+P       +P D+++ G D  R  FH+  + A     + P 
Sbjct: 526 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 578

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            K+V +HGFI   +G K+SKSLGNV+DP+EV+E+ G + LR +L
Sbjct: 579 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 621


>gi|329116643|ref|ZP_08245360.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907048|gb|EGE53962.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 499 TDQRPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|281412859|ref|YP_003346938.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373962|gb|ADA67524.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 919

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)

Query: 230 VWIDALTNY-LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VWID+  ++   TT   D+P       +P D+++ G D  R  FH+  + A     + P 
Sbjct: 526 VWIDSGASFEYITTKREDHP-------FPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPY 578

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            K+V +HGFI   +G K+SKSLGNV+DP+EV+E+ G + LR +L
Sbjct: 579 -KEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWL 621


>gi|163759464|ref|ZP_02166549.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283061|gb|EDQ33347.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 947

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 25/268 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     K +++  D+ V G DI+ F    W A ++   L  
Sbjct: 518 VLDTWFSSALWPFSTLGWPDKTPELK-RYYQTDVLVTGFDIIFF----WVARMMMMGLHF 572

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V+ H  +  K G K+SKS GNVIDP+E+I+E G DALR+ L    A G+D  
Sbjct: 573 MDEEPFHTVYVHALVRDKNGAKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVK 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D   +    N      + N  +R   M     D       A    +  IL+  +R   E
Sbjct: 633 LDPSRIAGYRN--FGTKLWN-ATRFADMNGAVLDPAFDPASAKLTINRWILTELTRTAAE 689

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP---WELKKTNPDRASTVLYVTVEVI 455
           +RE ++    + A A +   V     D Y +  KP    E +    +  +   YV  E +
Sbjct: 690 VREAIEGYKFNEASAALYRFVWNQLCDWYLELLKPVFNGEDEAAKVEARACAAYVLAESV 749

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483
           +    LL  F+P +  +++  L  A EN
Sbjct: 750 K----LLHPFMPFMTEELWAHL--AGEN 771


>gi|134300354|ref|YP_001113850.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189082997|sp|A4J7H2|SYL_DESRM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134053054|gb|ABO51025.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 827

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y      YP+ + H+GH     I DV+ARF  + G DVL   G D  G     AA
Sbjct: 31  ERPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQGYDVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N  + R     L +SYD    + T    ++   + L+ ++  KG  Y
Sbjct: 91  IKHGIAPATWTWDNIAHMRSQLKQLGLSYDWNREVATCHTEYYKWGQWLFLQLYKKGLCY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K      +         +++V  GA  +        V+  E + +FFR++ Y  +LL+
Sbjct: 151 KKHARVNWCPDCATVLANEQVVDGACERCSAV----VEQKELDQWFFRITEYAQRLLN 204



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 32/262 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF----- 278
           M  ++D+   YL  T   D     D +KA  W   D ++ G +    H +Y   F     
Sbjct: 496 MDTFVDSSWYYLRYTSSRDTEYAWDKNKADRWMNVDQYIGGVEHAILHLLYSRFFTKVFY 555

Query: 279 ---LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L++   P  + + + G +L  G K+SKS GNV+ P E+I+  G D  R F++     
Sbjct: 556 DLGLVNVQEPF-ENLLTQGMVLKDGSKMSKSKGNVVSPEEIIDRYGADTARMFILFAAPP 614

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSV 393
            +D  +   G++       ++   N V R V  +  +  G   I +  A+    + +  +
Sbjct: 615 ERDLEWSDRGVEG------SHRFLNRVWRLVYSLKDEVAGAPAISSVNAYVGVHKEMRRL 668

Query: 394 CSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               ++++ E++  +   + A++ ++ LV+ +  Y D       K    +R + VL    
Sbjct: 669 THYAIKKVTEDVSGRFNFNTAISTIMELVNGIYTYRD-------KVAAVERDTAVL---A 718

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
           E +    ILL  F P +A +++
Sbjct: 719 EAVNSTIILLAPFAPHIAEELW 740


>gi|315077594|gb|EFT49650.1| leucyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327452996|gb|EGE99650.1| leucyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 826

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTVLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDIDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  D+
Sbjct: 685 GRYNVVVARIMELVNATRKAIDS 707


>gi|187250670|ref|YP_001875152.1| valyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186970830|gb|ACC97815.1| Valyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 904

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 21/174 (12%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIY 274
           G     DP  ++  W  +    ++T G+   P+ +K    F+P    V G +IL      
Sbjct: 465 GTDFVQDPD-VLDTWFSSALWPISTLGW---PEKTKELEYFYPTSTMVTGYEILYL---- 516

Query: 275 WPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
           W A +       +  LP  K VF +G I  K G+K+SKSLGNVIDP+++  + G DA+R+
Sbjct: 517 WVARMAITGIDFTGKLPF-KDVFLNGIIRDKTGKKMSKSLGNVIDPLDMTAKYGTDAVRF 575

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            L+ +   GKD  Y ++ +    N    N I N  SR + M + D  G +  P 
Sbjct: 576 SLLMQAVLGKDIPYAEESIVGARN--FCNKIYN-ASRFILMNMGDLKGPLKMPA 626


>gi|229582044|ref|YP_002840443.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012760|gb|ACP48521.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 980

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW D+   +  + G   +      +  P DL + G D LR     W   LL + L L  K
Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
                V  HGF+L  +G ++ KSLGN ++P  VI+  G D LR +L+R        F + 
Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L KR   DL       V  S+ M L +++ +  T     +     D  ILS  + +L
Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ E+M+N  +H     +I+ LV +V R++     ++ W   + N      + Y+   +
Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           ++Q  IL    +P ++ KI+    V
Sbjct: 685 LKQCIILASTIIPFISEKIYKSFVV 709


>gi|311896027|dbj|BAJ28435.1| putative valyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 879

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 254 KFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           KF+P D+ + G DI+ F     + +  + +   +P  K V   G +  + G+K+SKS GN
Sbjct: 485 KFYPTDVLLTGHDIIFFWVARMMMFGLYAMDGEIPF-KTVALTGLVRDQFGKKMSKSTGN 543

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            +DP++ ++  G DA+R+ L R    G D    +D +K   N    N I N  +R   M 
Sbjct: 544 AVDPLDWMDAYGADAVRFTLARGANPGADVPIGEDWVKGSRN--FCNKIWN-ATRFALMN 600

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                G +P P   T +D  ILS  +  + E+
Sbjct: 601 GATVRGPLPAPEELTAADRWILSRLNSTVTEV 632



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 24/140 (17%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   +  I  PN     H+GHA++  + D L R  R+ G + L+  G D  G     K+
Sbjct: 51  EKPAYTIVIPPPNVTGALHLGHAFQHTLMDALTRRKRMLGFEALWLPGMDHAGIATQNKV 110

Query: 59  AKAAQNAGVT-----TKVFVDQ--------NSR---NFRDMADVLDISYDDFIRTTEKRH 102
            +    AG++        FVD+          R     R + D +D S + F  T ++  
Sbjct: 111 EQQLAEAGLSRHDLGRAAFVDKVWEWKENYGGRILGQMRRLGDGVDWSRERF--TMDEGL 168

Query: 103 HDTCRILWKKISDKGDIYKG 122
               + ++KK+ D G IY+ 
Sbjct: 169 SQAVQTIFKKLFDDGLIYRA 188


>gi|254821843|ref|ZP_05226844.1| valyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 882

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 118/306 (38%), Gaps = 60/306 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           ++D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 407 MRDWTISRQLW-WGHRIPIWYGPNGEQVCVGPDETPPEGWEQDPD-VLDTWFSSALWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------------------SA 282
           T G+ D       KF+P  + V G DIL     +W A ++                    
Sbjct: 465 TLGWPDKTP-ELEKFYPTSVLVTGYDIL----FFWVARMMMFGTFVGDDDAITLDGRRGP 519

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +P    VF HG I    G K+SKS GNVIDP++ +E  G DALR+ L R  + G D   
Sbjct: 520 QVPF-TDVFLHGLIRDESGRKMSKSKGNVIDPLDWVELFGADALRFTLARGASPGGDLAI 578

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            +D +  R + +    + N  +   +++       +P P   T++D  IL     V  E+
Sbjct: 579 GEDHV--RASRNFCTKLFN--ATRYALLNGAQLASLPPPAELTDADRWILGRLEEVRAEV 634

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
                N    RA   +       D + D    W ++      A  V + T  +   L  L
Sbjct: 635 DSAFDNYEFSRACEALYHFA--WDEFCD----WYVELAKTQLAEGVAHTTAVLAATLDTL 688

Query: 462 LQAFVP 467
           L+   P
Sbjct: 689 LRLLHP 694


>gi|224499788|ref|ZP_03668137.1| valyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|149012557|ref|ZP_01833554.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763362|gb|EDK70299.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|289548809|ref|YP_003473797.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182426|gb|ADC89670.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 1144

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 46/277 (16%)

Query: 233 DALTNYLTTT----GYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           D L  + ++     G    P+ +K  ++ +P DL V G DI+     +W A ++   +  
Sbjct: 707 DVLDTWFSSALWPFGVWGYPEKTKDLSELYPTDLLVTGFDII----FFWVARMVMMGMHF 762

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIA 334
            K      V+ H  +   KG+K+SK+ GNVIDP+++IE+ G DALR+ L       R+I 
Sbjct: 763 MKDIPFRDVYIHALVRDEKGQKMSKTKGNVIDPLDIIEKYGADALRFTLSILTQQGRDIK 822

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +  F   +G K       AN + N     +  + +D    +P        D  I ++ 
Sbjct: 823 LSEKRF---EGYKH-----FANKLWNAARFVLMNLQEDLLANLPMCAPPRWEDLWITTLL 874

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-----------SEVDRYFDAQKPWELKKTNPDR 443
           +  ++E+ E ++     RA  ++   V           S++  Y + + P  +K      
Sbjct: 875 NETVKEVNEALERYDFSRACQKIYDFVWSEFCDWYIEMSKIRLYAEGEDP-SVKGEKLTA 933

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +T+L V   V+R    LL  F+P +  +++  L  A
Sbjct: 934 QATLLRVLDTVLR----LLHPFMPFITEELWRHLPTA 966


>gi|225868079|ref|YP_002744027.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701355|emb|CAW98405.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-KKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +K FS    HG I   +G K+SKSLGN IDP+++IE  G DALR+FL    A G+D  
Sbjct: 499 TGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPMDIIETYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+  
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEQVVSG 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L ++I  V+E
Sbjct: 604 AAGNVTDRWILHNLNEMIGKVTE 626



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  AIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++           KV  + D+ +   ++    L +S  D+ R   T ++      R 
Sbjct: 100 EQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSL-DYARDRFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|196039843|ref|ZP_03107147.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029546|gb|EDX68149.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 928

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ ++++         +      WPAD+++ G D  R  F++    A  +    
Sbjct: 527 IMDVWFDSGSSHMAVL------ERRPELRWPADMYLEGSDQHRGWFNSSLSTAVAVKGQA 580

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF+L  +G K+SKSLGNV+DP+EV++ +G D LR ++ 
Sbjct: 581 PY-RAVLTHGFLLDGEGRKMSKSLGNVVDPLEVMDRLGADILRLWVA 626



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +F  +DG +  +  G D HG  I  A
Sbjct: 45  RGRPKFILHDGPPYANGNIHVGHALNKILKDMIVKFKTMDGFEAPYVPGWDTHGLPIEHA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              +    +  +D     FR+M     + Y D  R   KR
Sbjct: 105 IIKSKNLNRHEID--VLEFREMCRQYALEYIDRQRGQFKR 142


>gi|284801943|ref|YP_003413808.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995085|ref|YP_003416853.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057505|gb|ADB68446.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060552|gb|ADB71491.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|182683501|ref|YP_001835248.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303255236|ref|ZP_07341309.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260058|ref|ZP_07346031.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261242|ref|ZP_07347190.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263907|ref|ZP_07349828.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267057|ref|ZP_07352928.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269272|ref|ZP_07355046.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|182628835|gb|ACB89783.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301801447|emb|CBW34135.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597777|gb|EFL64850.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637376|gb|EFL67863.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638753|gb|EFL69215.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641169|gb|EFL71542.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643385|gb|EFL73661.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646312|gb|EFL76538.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|254831953|ref|ZP_05236608.1| valyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|148998241|ref|ZP_01825710.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576529|ref|ZP_02722403.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067188|ref|YP_003876154.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147755884|gb|EDK62928.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577726|gb|EDT98254.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408725|gb|ADM84152.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|228933508|ref|ZP_04096361.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826237|gb|EEM72017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|168482808|ref|ZP_02707760.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043865|gb|EDT51911.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|313889902|ref|ZP_07823543.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121750|gb|EFR44848.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 + V  HG I   +G K+SKSLGN IDP++V+E+ G DALR+FL    A G+D
Sbjct: 499 TNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVVEKYGADALRWFLSNGSAPGQD 556



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 23/164 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G+T           KV  + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EQGITRYDLGREKFLEKVWEWKDEYAATIKEQWGKMGISV-DYSRERFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151
           ++  +  KG IY+G +   W      A  + + ++K  +G +Y+
Sbjct: 159 VFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYH 202


>gi|312136597|ref|YP_004003934.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224316|gb|ADP77172.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 876

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 26/259 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+  + L   G+   P  +  K +PA+L   G DI+R  A Y       L+   
Sbjct: 451 VLDTWMDSSISPLVVAGW---PQKNYRKLFPANLRPQGHDIIRTWAFYTILRCKALTGEK 507

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG------KD 338
           P  + V +       G K+SKS GNVI+P EV+E+ G DALR +    +         KD
Sbjct: 508 PFDEIVINGMVFGEDGHKMSKSRGNVIEPEEVLEKYGADALRLWAANSVPGSDVPFAWKD 567

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRV 397
             Y    L+K  NA           R +S+ I K+ +  +         D  ILS  +R+
Sbjct: 568 VKYGYKFLRKFWNA----------FRFMSIHIFKEEENEV--EAKLNYMDRWILSKLNRL 615

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++ + +++       A+  +   V  V  D Y +A K       N +          +V+
Sbjct: 616 VENVTKSINQYNFADAITNIQQFVWHVFCDEYIEAVKYRLYSDENKEMREGAKRTLEKVL 675

Query: 456 RQLAILLQAFVPKLANKIF 474
           +    LL  FVP    +++
Sbjct: 676 KTCLKLLAPFVPHFVEEVY 694



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +R    I T   YP    H+GH    +  D++ARF R++G +VLF  G D HG
Sbjct: 33 KRPSYVIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMNGFNVLFPQGWDCHG 85


>gi|47096717|ref|ZP_00234302.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898281|ref|ZP_05258205.1| valyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912226|ref|ZP_05262238.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936554|ref|ZP_05268251.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014901|gb|EAL05849.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609148|gb|EEW21756.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590201|gb|EFF98535.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|332076405|gb|EGI86868.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|315282473|ref|ZP_07870879.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613881|gb|EFR87619.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDXEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYSEIDLTNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 27/169 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+    +
Sbjct: 45  SVVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAKLK 104

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHDTC 106
            A ++     D    NF D        Y +FIR                 T +    D  
Sbjct: 105 EANISR---YDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSDAV 161

Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 162 KKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|237650162|ref|ZP_04524414.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821761|ref|ZP_04597606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|228914790|ref|ZP_04078399.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845109|gb|EEM90151.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 1033

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|148990086|ref|ZP_01821340.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924612|gb|EDK75699.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|16803592|ref|NP_465077.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501508|ref|ZP_03669815.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508987|sp|Q8Y6X9|SYV_LISMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16410981|emb|CAC99630.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 883

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|15902536|ref|NP_358086.1| valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516342|ref|YP_816000.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81450080|sp|Q8DQU7|SYV_STRR6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15458063|gb|AAK99296.1| Valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076918|gb|ABJ54638.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|323474747|gb|ADX85353.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 980

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW D+   +  + G   +      +  P DL + G D LR     W   LL + L L  K
Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
                V  HGF+L  +G ++ KSLGN ++P  VI+  G D LR +L+R        F + 
Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L KR   DL       V  S+ M L +++ +  T     +     D  ILS  + +L
Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ E+M+N  +H     +I+ LV +V R++     ++ W   + N      + Y+   +
Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           ++Q  IL    +P ++ KI+    V
Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709


>gi|225867757|ref|YP_002743705.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511552|sp|C0MET9|SYL_STRS7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225701033|emb|CAW97815.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 833

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  E    PE I  ++R
Sbjct: 205 ADLEEVDWPESIKDMQR 221


>gi|194398081|ref|YP_002037231.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357748|gb|ACF56196.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|254828213|ref|ZP_05232900.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600602|gb|EEW13927.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 450 VLDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 509

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 510 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSY 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N    N I N  SR V M L   DGM    I        SD+ IL+  +  +Q
Sbjct: 569 EKVESTWN--FINKIWN-ASRFVLMNL---DGMKYNEIDLSNVTEVSDKWILTRLNETIQ 622

Query: 400 EI 401
            +
Sbjct: 623 AV 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 45  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 99

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+     SR      NF D        Y +FIR                 T +    D
Sbjct: 100 EAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSD 159

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++  + +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 160 AVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 210


>gi|149021523|ref|ZP_01835578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930219|gb|EDK81204.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|15678792|ref|NP_275909.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621857|gb|AAB85270.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 897

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+  + L+  G+   PD S  + +PADL   G DI+R  A Y       L+   
Sbjct: 475 VLDTWMDSSISPLSVAGW---PDESYRELFPADLRPQGHDIIRTWAFYTILRCMALTGEK 531

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNVI P EV+E+ G DALR +    +      F  KD
Sbjct: 532 PFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADALRLWAAGSVPGSDVPFAWKD 591



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 16/114 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  I T   YP    H+GH    +  D++ARF R+ G DVLF  G D H         
Sbjct: 56  KPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMRGFDVLFPQGWDCH--------- 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
             G+ T+V V++ + N +      D+S ++F R   +   +  R++ +++   G
Sbjct: 107 --GLPTEVKVEE-THNIKKS----DVSREEFRRLCVELTQENIRMMKEQMQRLG 153


>gi|149002240|ref|ZP_01827182.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759555|gb|EDK66546.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|313200359|ref|YP_004039017.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439675|gb|ADQ83781.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 826

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH     I DVL+RFHR+ G +V+   G D  G     AA
Sbjct: 31  DKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMKGFNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  + +     L +  D    I T +  ++   + L+ ++  KG IY
Sbjct: 91  IKNNVAPAGWTYSNIEHMKSQLKSLGLGIDWQREIATCKPEYYRWEQWLFTELFKKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   +  +   D+    +++V    DG+ + +    V+  +   YF +++AY D+LL+  
Sbjct: 151 KKTATVNWDPVDQTVLANEQVI---DGRGWRS-GAIVEKRDIPQYFMKITAYADELLADL 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DKLEGWPEQVKTMQR 221



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        LL  + P   K+ + G +L  G K
Sbjct: 523 RANYWLPVDQYIGGIEHAILHLLYARFFNKLMRDVGLLKNDEPF-NKLLTQGMVLKDGSK 581

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP  +IE+ G D  R F++
Sbjct: 582 MSKSKGNTVDPQALIEQYGADTARLFMM 609


>gi|168492725|ref|ZP_02716868.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225854110|ref|YP_002735622.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|183577078|gb|EDT97606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225723634|gb|ACO19487.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|20094335|ref|NP_614182.1| isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74560178|sp|Q8TWY2|SYI_METKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19887391|gb|AAM02112.1| Isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 1080

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 47/287 (16%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---------------NPDGSKAKFWPADLHVI 263
           ++PD    ++ VW+D+      + GY                 +PD  +A    AD    
Sbjct: 535 RVPD----VLDVWVDSGVAAWASLGYPRREDEFERWFLKEGRCDPDDPEAG---ADFITE 587

Query: 264 GKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV 320
           G D  R  F++      +     P  + V  HGF L  +G K+SKSLGNV+DP++V+E+ 
Sbjct: 588 GHDQTRGWFYSQLGCGVVTFDTCPY-RTVLMHGFTLDEEGRKMSKSLGNVVDPMDVVEKY 646

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D LR++++R  A  +D  +    ++    A   N + N  +   + +  + D   P  
Sbjct: 647 GADTLRWYVLRSNAPWRDMHFSWQDVRDTHRA--LNVLWN--AYRFTKMYSELDEFDPEE 702

Query: 381 GAFTESDES-------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---D 429
               + +E        +LS  + +++E+ +  +   +H A   +   V+E + R++    
Sbjct: 703 HPLEDLEEHLKPEDRWLLSRINSLVEEVTDAFERYHVHEAARALYRFVTEDLSRWYIRLV 762

Query: 430 AQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++ W L+  +P++ +   VL+ T +   +L  LL   VP +A +I+
Sbjct: 763 RERVW-LEGDDPEKLAVYAVLHYTFD---RLVRLLAPIVPHVAERIY 805


>gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 14/109 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           IM VW D+ ++++     L+  +G +   WPADL++ G D    H  ++ + LL++    
Sbjct: 529 IMDVWFDSGSSHVAV---LETTEGLR---WPADLYLEGSDQ---HRGWFQSSLLTSVATR 579

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +   K V +HGF++  +G K+SKSLGN IDP +V++E G D LR + V
Sbjct: 580 GMAPYKNVLTHGFVVDGEGRKMSKSLGNGIDPADVVKEYGADILRLWTV 628



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 29/61 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   H+G A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKFILHDGPPYANGDIHLGTAMNKVLKDMIVKYKTMRGFDAPYVPGWDTHGLPIEQQ 104

Query: 62  A 62
           A
Sbjct: 105 A 105


>gi|302534400|ref|ZP_07286742.1| valyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443295|gb|EFL15111.1| valyl-tRNA synthetase [Streptomyces sp. C]
          Length = 873

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 55/329 (16%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------DDPQY---- 226
           I P+E       +V + L D  +SR+ + WG +IP                + P      
Sbjct: 391 IHPVEMEKRYFDWVDN-LNDWCISRQLW-WGHRIPVWYGPDGEVVCVGPDEEAPSGGGWT 448

Query: 227 ----IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRF---HAIYWPAF 278
               ++  W  +     +T G+ +  PD   AKF+  D+ V G DI+ F     + +  +
Sbjct: 449 QDTDVLDTWFSSGLWPFSTLGWPEKTPD--LAKFYSTDVLVTGHDIIFFWVARMMMFGLY 506

Query: 279 LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +   +P  K +   G +   +G+K+SKS GNV+DP++ +++ G DA+R+ L +    G 
Sbjct: 507 AMDGEVPF-KTIALTGLVRDERGKKMSKSFGNVVDPLDWMDKYGSDAVRFTLAKGANPGT 565

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D    +D ++   ++  AN I N  +R   M     +G +P     + +D  ILS  ++ 
Sbjct: 566 DVPIGEDWVQ--ASSKFANKIWN-ATRFALMNGATIEGELPPAEQLSATDRWILSRLNKT 622

Query: 398 LQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKT----NPDRASTVL 448
           + ++    E+ Q   +  AL          D  FD    W  EL KT      ++A    
Sbjct: 623 VAQVDGYYEDFQFSKLSEALYHFA-----WDEVFD----WYVELSKTTFFAGGEQAKVSS 673

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V  EVI  +  LL   VP +   ++  L
Sbjct: 674 RVLGEVIDVMLRLLHPVVPFVTETLWTTL 702


>gi|228927261|ref|ZP_04090323.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832408|gb|EEM77983.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 1033

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++E+ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|212546259|ref|XP_002153283.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210064803|gb|EEA18898.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 996

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVL+RF+++ G DVL   G D  G     AA
Sbjct: 92  DRPKSYILSMFPYPSGTMHMGHLRVYTISDVLSRFYKMRGHDVLHPIGWDAFGLPAENAA 151

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              GV    +  QN    +         +D   + +  + + +  T RI    + +KG  
Sbjct: 152 IERGVQPAEWTVQNIERMKVQLRSFGPGFDWERELMTCSPEFYKHTQRIFL-MLYEKGLA 210

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++A++++LL  
Sbjct: 211 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLKLKQWFFRITAFKEELLKD 267

Query: 180 YES----HPEFILPIER 192
            +S     PE +L ++R
Sbjct: 268 LDSLSGGWPERVLSMQR 284


>gi|207109742|ref|ZP_03243904.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 161

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL     +W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 24  FYPNTTLITGFDIL----FFWVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 78

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN I N  S
Sbjct: 79  GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKIFNAAS 132


>gi|229918362|ref|YP_002887008.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469791|gb|ACQ71563.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 27/265 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 451 VLDTWFSSALWPFSTMGWPDADAPDFNRYFPTSALVTGYDIIFF----WVSRMIFQSLEF 506

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V  HG I   +G K+SKSLGN +DP+EVI++ G D+LR+FL+     G D  
Sbjct: 507 TGKQPFNDVLIHGLIRDSEGRKMSKSLGNGVDPMEVIDQYGADSLRWFLLTGSTPGNDLR 566

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396
           +  + ++   N   AN I N    +    L + DG+    I   G  T +D+ IL+  + 
Sbjct: 567 FYWEKIESTWN--FANKIWN----ASRFALMNMDGLKVEDIDLTGEKTLADKWILTRLND 620

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452
            + ++   +       A   + + + E   + Y +  K   L     D A+  T   V  
Sbjct: 621 TIDQVTRLVDKYEFGEAGRYLYNFIWEEFCNWYIEMAK---LTLYGEDEAAKHTTRSVLA 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
             +  +  L+  F+P L  +I+  L
Sbjct: 678 HTLDSIMRLMHPFMPFLTEEIWQHL 702



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G     K+ +  +
Sbjct: 45  TIVIPPPNVTGKLHLGHAWDTTLQDLLTRLKRMQGYDVLWLPGMDHAGIATQAKVEQKLR 104

Query: 64  NAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             GV             T  + D+ ++  RD    L +   D+ R   T ++      + 
Sbjct: 105 EEGVMRYDLGREKFLEKTWEWKDEYAKTIRDQWSKLGLGL-DYSRERFTLDEGLSKAVQE 163

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++ +KG IY+G Y   W   +  A  + + +Y+  +G +Y+ ++
Sbjct: 164 VFVRLYEKGLIYRGEYIVNWDPAQKTAVSDIEVIYQEVEGAFYHMKY 210


>gi|124265411|ref|YP_001019415.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|189030288|sp|A2SC91|SYL_METPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124258186|gb|ABM93180.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 897

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  + + YP+ + H+GH     I D++AR+ R+ G +VL   G D  G     AA 
Sbjct: 39  RPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGYNVLMPMGWDAFGLPAENAAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +   N  + +     L +++D    + T +  ++   +  + K+ +KG  YK
Sbjct: 99  DKKVAPAQWTRDNIADMKSQMQPLGLAFDWSREVATCDPDYYKWNQWFFLKLLEKGIAYK 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D+    +++V    DG+ + +   PV+  E  GY+  ++ Y D+LL+
Sbjct: 159 KTQVVNWDPVDQTVLANEQVI---DGRGWRSG-APVERREIPGYYLAITQYADELLA 211


>gi|221231401|ref|YP_002510553.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|220673861|emb|CAR68364.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYIFMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|34557968|ref|NP_907783.1| valyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81653436|sp|Q7M8H7|SYV_WOLSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|34483686|emb|CAE10683.1| VALYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 894

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 53/252 (21%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L+++ Y    E ++   G+ Y    N V+    + +F +    Q K +    S      P
Sbjct: 349 LQEKGYIEKIEEHENQVGKCYRC-GNVVEPYISKQWFVKKEVAQ-KAIERINSGEAAFYP 406

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
            + +N   +++K  L+D  +SR+ + WG +IP                            
Sbjct: 407 AQWKNNYNAWMKE-LRDWCISRQLW-WGHQIPVYYCDCGHEWASETTPSHCPKCQGSQFH 464

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFHAI 273
            DP  ++  W  +     +T G+ +   G  +        +F+P  L + G DIL F   
Sbjct: 465 QDPD-VLDTWFSSALWPFSTLGWGNGEAGKGSWWREEDLQEFYPNSLLITGFDILFF--- 520

Query: 274 YWPAFLLSA------NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            W A +L        NLP  K ++ H  +   KG+K+SKS GNVIDP+E+IE+ G D+ R
Sbjct: 521 -WVARMLMMGEHFLDNLPF-KDIYLHALVRDEKGQKMSKSKGNVIDPLELIEKYGCDSTR 578

Query: 327 YFLVREIACGKD 338
           + L    A G+D
Sbjct: 579 FTLAILCAQGRD 590



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           HIGHA    + D++ R+ R+DG   L+  GTD  G
Sbjct: 76  HIGHALNHTLIDIMTRYKRMDGYKTLWQPGTDHAG 110


>gi|168490541|ref|ZP_02714684.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574795|gb|EDT95323.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|12585560|sp|O26861|SYV_METTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 877

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+  + L+  G+   PD S  + +PADL   G DI+R  A Y       L+   
Sbjct: 455 VLDTWMDSSISPLSVAGW---PDESYRELFPADLRPQGHDIIRTWAFYTILRCMALTGEK 511

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNVI P EV+E+ G DALR +    +      F  KD
Sbjct: 512 PFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADALRLWAAGSVPGSDVPFAWKD 571



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + +  I T   YP    H+GH    +  D++ARF R+ G DVLF  G D HG
Sbjct: 36 KPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMRGFDVLFPQGWDCHG 87


>gi|306824631|ref|ZP_07457976.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304433199|gb|EFM36170.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 882

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISRYILM 582



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|294055708|ref|YP_003549366.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615041|gb|ADE55196.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 913

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 140/350 (40%), Gaps = 74/350 (21%)

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQYIMYVWIDA------------- 234
           +G++D  +SR+ + WG +IP               +P ++ +V ID              
Sbjct: 400 NGIQDWCISRQLW-WGHRIPVWYKKGFERSELDFSNPDHV-HVSIDGPSDPENWEQEADV 457

Query: 235 ----LTNYLTTTGYLD--NPDGSKAK---FW-PADLHVIGKDILRFHAIYWPAFLLSANL 284
                ++YL   G L   NP   + K   FW P    V G DI+ F    W A ++ A L
Sbjct: 458 LDTWASSYLWPMGNLGWPNPTADQQKEQDFWYPTSTLVTGFDIIFF----WVARMIMAGL 513

Query: 285 PL-----------------P-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            L                 P K +F HG I   KG K+SKSLGN  DP+++IE+ G D L
Sbjct: 514 ELFGEDAKELSDEEIAKRIPFKNIFIHGLIRDEKGRKMSKSLGNSPDPLDLIEKFGADGL 573

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFT 384
           R+ +      G D  + +D ++  +  +  N + N    R +S  + D   +        
Sbjct: 574 RFGICNIAPTGSDILFSEDRIQ--IGRNFCNKLWNASRFRQMSGPMADNSSLESIHARID 631

Query: 385 ES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
           +S     D  IL   + V  E+ +   +  +     Q+         D Y +A K  +LK
Sbjct: 632 QSLLDDTDHWILGRLAEVTAEVEKCFTDYELAPLTHQIYGFFWSDFCDWYVEASKG-KLK 690

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +  +R    L +   V+RQ+  L    +P +  +++  L    E    Q
Sbjct: 691 GSEAER-DHCLAIQDLVLRQVLQLANPVIPHITEELWKGLGYGGEGSFIQ 739


>gi|188584421|ref|YP_001927866.1| valyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347919|gb|ACB83331.1| valyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 906

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+     +W A
Sbjct: 464 VALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVA 517

Query: 278 FLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L L  +     V+ H  +   KG K+SKS GNV+DP+++I+  G DALR+ L  
Sbjct: 518 RMMMMGLHLTDQAPFDTVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAA 577

Query: 332 EIACGKD 338
             A G+D
Sbjct: 578 LAAPGRD 584



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    I D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGRDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERK 96


>gi|33241445|ref|NP_876386.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33235953|gb|AAP98043.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 1043

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   ++  F PAD    G D  R    ++   ++SA L
Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  +    +G IL + G K+SK L N   P  V++  G DALR +L+  +    +  
Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629

Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            F DK  +G+ K++   L N +   N  +       K  D       A+TE D+ ILS  
Sbjct: 630 RFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449
             V+ ++RE+M    ++ A+   ++ + ++  ++     ++ WE + T PDR  A + LY
Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAEDT-PDRRAAFSTLY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782


>gi|271499707|ref|YP_003332732.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343262|gb|ACZ76027.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 860

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|238619860|ref|YP_002914686.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238380930|gb|ACR42018.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323477475|gb|ADX82713.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 980

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW D+   +  + G   +      +  P DL + G D LR     W   LL + L L  K
Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
                V  HGF+L  +G ++ KSLGN ++P  VI+  G D LR +L+R        F + 
Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L KR   DL       V  S+ M L +++ +  T     +     D  ILS  + +L
Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ E+M+N  +H     +I+ LV +V R++     ++ W   + N      + Y+   +
Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           ++Q  IL    +P ++ KI+    V
Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709


>gi|15900480|ref|NP_345084.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657453|ref|ZP_01408202.1| hypothetical protein SpneT_02001347 [Streptococcus pneumoniae
           TIGR4]
 gi|81532202|sp|Q97S45|SYV_STRPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14972043|gb|AAK74724.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|284997892|ref|YP_003419659.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445787|gb|ADB87289.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 980

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW D+   +  + G   +      +  P DL + G D LR     W   LL + L L  K
Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
                V  HGF+L  +G ++ KSLGN ++P  VI+  G D LR +L+R        F + 
Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L KR   DL       V  S+ M L +++ +  T     +     D  ILS  + +L
Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ E+M+N  +H     +I+ LV +V R++     ++ W   + N      + Y+   +
Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           ++Q  IL    +P ++ KI+    V
Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709


>gi|262165198|ref|ZP_06032935.1| leucyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262024914|gb|EEY43582.1| leucyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 858

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|254796861|ref|YP_003081698.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590097|gb|ACT69459.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 854

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + H+GH    +I DVLAR+ R  G +VL   G D  G    KAA
Sbjct: 48  KRKKYYVLSMFPYPSGKLHMGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 107

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            ++ +  +++ ++N    R     + +SYD
Sbjct: 108 ISSNIHPRIWTEKNIAKMRTSLKSIGLSYD 137


>gi|118618980|ref|YP_907312.1| valyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571090|gb|ABL05841.1| valyl-tRNA synthetase protein ValS [Mycobacterium ulcerans Agy99]
          Length = 886

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 32/181 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                   A +P    VF HG 
Sbjct: 478 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGGDEVITLDGRRGAQVPF-TDVFLHGL 532

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I  + G K+SKS GNVIDP++ I+  G DALR+ L R  + G D    +D ++   N   
Sbjct: 533 IRDEFGRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGSDLAVGEDAVRASRN--- 589

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               G  +  +    L +   + P P  G  T++D  IL     V  E+     +    R
Sbjct: 590 ---FGTKLFNATRYALLNGAALAPLPPLGELTDADRWILGRLEEVRAEVDSAFDSYEFSR 646

Query: 413 A 413
           A
Sbjct: 647 A 647



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA E  + D L R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQTVVEKQLAADGKTKEDFGREL 119

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FVD+                R + D +D S D F  T ++      R ++K++ D G IY
Sbjct: 120 FVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGLIY 177

Query: 121 KG 122
           + 
Sbjct: 178 QA 179


>gi|94987090|ref|YP_595023.1| valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731339|emb|CAJ54702.1| Valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 882

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+  N     A F+P  + V G DIL F    W A ++   L  
Sbjct: 448 VLDTWFSSAIWPFSTLGW-PNKTPELAMFYPTSILVTGFDILFF----WVARMMMFGLHF 502

Query: 287 PKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K V F H +I       +G K+SKSLGN IDPI++IE+ G DALR+ L    A G+D
Sbjct: 503 MKDVPFRHVYIHALIRDSEGRKMSKSLGNSIDPIQMIEKYGTDALRFTLTAFAAMGRD 560


>gi|67922817|ref|ZP_00516316.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67855310|gb|EAM50570.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 907

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 34/297 (11%)

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           S ++ L  +++ +   IK+  DP  ++  W  +     +T G+ +N +  K  ++P    
Sbjct: 442 SEVEALEKAKQEYGDNIKLEQDPD-VLDTWFSSGLWPFSTLGWPENTEDLKT-YYPTSTL 499

Query: 262 VIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           V G DI+ F    +   A   +  +P  K V+ HG +    G+K+SK+  N IDP+ +I+
Sbjct: 500 VTGFDIIFFWVARMTMMAGYFTDEMPF-KDVYIHGLVRDENGKKMSKTANNGIDPLILID 558

Query: 319 EVGVDALRYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKD 372
           + G DALRY L+R++A  G+D    +  K    + V A  + AN + N  +R V M LK 
Sbjct: 559 KYGTDALRYTLIRDVAGAGQDISLQYDRKTDQSESVEASRNFANKLWN-AARFVMMHLKG 617

Query: 373 YDGMIPTPGAFTESDESILSVCSR-VLQEIRENMQN---QLIHRALAQVISLVSE----- 423
                 TP +    +   L +C R +L    + +Q    Q+    L +    + E     
Sbjct: 618 -----ETPQSLGTPEIDKLELCDRWILSRFHQTVQQTKKQIEAYGLGEAAKGLYEFIWGD 672

Query: 424 -VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   W+   +      T+ Y+    ++    LL  F+P +  +I+  L
Sbjct: 673 FCDWYIELVKTRLWQETPSRDVARQTLAYILDGTLK----LLHPFMPHITEEIWQTL 725


>gi|257866932|ref|ZP_05646585.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257800988|gb|EEV29918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 767

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 13/185 (7%)

Query: 15  YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + A + G     F 
Sbjct: 4   YPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFT 63

Query: 74  DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG-CYSGWYSL 130
            +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y+      W   
Sbjct: 64  KKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAYEAEVPVNWVPE 123

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYES--HPEFI 187
                 N++ +   ++   Y+    P+ QWM       +++AY D+LL   E    PE I
Sbjct: 124 LGTVIANEEVIDGKSERGGYDVIRKPMRQWM------LKITAYADRLLDDLEEVDWPESI 177

Query: 188 LPIER 192
             ++R
Sbjct: 178 KEMQR 182



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 477 DYDKLKRWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGEN 536

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +VI + G D LR + +          ++++GL+         G  
Sbjct: 537 NEKMSKSRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLE---------GSR 587

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ +   M      F  +D  +  V  + ++++ E+ +    + A++Q++ 
Sbjct: 588 KFLDRVWRLIVDENGKMRDRITTF--NDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMV 645

Query: 420 LVSEV 424
            V+E 
Sbjct: 646 FVNEA 650


>gi|254564061|ref|YP_003071156.1| valine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254271339|emb|CAX27351.1| valine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 949

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 12/122 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+     +W A ++  
Sbjct: 512 DPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDII----FFWVARMMMM 565

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L L  +       LH      KG K+SKS GNV+DP+++I+  G DALR+ L    A G
Sbjct: 566 GLHLTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAALAAPG 625

Query: 337 KD 338
           +D
Sbjct: 626 RD 627



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    I D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39  SIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTD-----------HAGI 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T++ V++     R      ++  ++F+R
Sbjct: 88  ATQMVVERKLME-RQQPGRRELGREEFLR 115


>gi|330798120|ref|XP_003287103.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum]
 gi|325082881|gb|EGC36349.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum]
          Length = 911

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 7/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+   H+GH     I+D +AR  R+ G DV+   G D  G     AA
Sbjct: 49  EKEKFYSLSQFPYPSGNLHMGHVRVYSISDCIARLKRMQGYDVIHPMGWDAFGLPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V+   + + N    +D    LD+ +  D  + T  K ++   + ++ K+   G  Y
Sbjct: 109 IDKKVSPSYWTNLNINTMKDQLKRLDLHFDWDRELSTCNKDYYRWTQDIFLKLFKSGLAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL 176
           +   +  +   D+    +++V    D Q  + + N  V+  E + +FF+++A  D+L
Sbjct: 169 RKSATVNWDPIDQTVLANEQV----DAQGRSWRSNAIVEKKEMKQWFFKITAMADRL 221


>gi|229017502|ref|ZP_04174403.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229023717|ref|ZP_04180208.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228737578|gb|EEL88083.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228743826|gb|EEL93927.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 1033

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|229579204|ref|YP_002837602.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228009918|gb|ACP45680.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 980

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW D+   +  + G   +      +  P DL + G D LR     W   LL + L L  K
Sbjct: 456 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 509

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
                V  HGF+L  +G ++ KSLGN ++P  VI+  G D LR +L+R        F + 
Sbjct: 510 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 569

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L KR   DL       V  S+ M L +++ +  T     +     D  ILS  + +L
Sbjct: 570 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 626

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ E+M+N  +H     +I+ LV +V R++     ++ W   + N      + Y+   +
Sbjct: 627 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 684

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           ++Q  IL    +P ++ KI+    V
Sbjct: 685 LKQWIILASTIIPFISEKIYKSFVV 709


>gi|15618033|ref|NP_224317.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835645|ref|NP_300169.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8928383|sp|Q9Z972|SYI_CHLPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4376371|gb|AAD18262.1| Isoleucyl-tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|8978483|dbj|BAA98320.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 1043

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   ++  F PAD    G D  R    ++   ++SA L
Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  +    +G IL + G K+SK L N   P  V++  G DALR +L+  +    +  
Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629

Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            F DK  +G+ K++   L N +   N  +       K  D       A+TE D+ ILS  
Sbjct: 630 RFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449
             V+ ++RE+M    ++ A+   ++ + ++  ++     ++ WE + T PDR  A + LY
Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAEDT-PDRRAAFSTLY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782


>gi|260773267|ref|ZP_05882183.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612406|gb|EEX37609.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 858

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 36/263 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N +  ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNKTAPAPWTYENIQYMKNQLKLLGFGYD------WSREFATCRPEYYRWEQEFFTKLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY  +
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQE 201

Query: 176 LLSYYESH---PEFILPIER----RNEVISF---VKSGLKDLSLSRKTFDWGIKIPDDPQ 225
           LL   ++    PE +  ++R    R+E +     VK   +DL +           PD   
Sbjct: 202 LLDDLDNLDGWPEMVKTMQRNWIGRSEGVELSFQVKDQAQDLEVYTTR-------PDTLM 254

Query: 226 YIMYVWIDALTNYLTTTGYLDNP 248
            + YV I A  + L      +NP
Sbjct: 255 GVTYVGI-AAAHPLAVQAAANNP 276


>gi|121703584|ref|XP_001270056.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119398200|gb|EAW08630.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 994

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 78  DKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMKGHEVLHPMGWDAFGLPAENAA 137

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 138 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLHKKGLAY 197

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++ +++ LL+  
Sbjct: 198 QAEAVVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLNDL 254

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 255 DSLAGGWPERVLAMQR 270


>gi|114764911|ref|ZP_01444084.1| valyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114542623|gb|EAU45647.1| valyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 1025

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 17/232 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSL 307
           +++P  + V G+DIL F    W A ++   L     +P + V+ HG +   KG+K+SKSL
Sbjct: 621 RYFPTSVLVTGQDILFF----WVARMMMMQLAVVDEIPFRDVYLHGLVRDAKGKKMSKSL 676

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+DP+E+I+E G DALR+      + G  G    D  +     +    + N    +  
Sbjct: 677 GNVVDPLEIIDEYGADALRFTNAAMASLG--GVLKLDMQRIAGYRNFGTKLWNAARFAEM 734

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--D 425
                  G  P P A    ++ IL   +RV + +   + +   + A   + + V  V  D
Sbjct: 735 NGAVGLGGDRPVPQATV--NKWILGETARVRETVDAALADYRFNDAALSLYAFVWGVVCD 792

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP    +    +A T   ++  VI Q  ILL   +P +  +++  L
Sbjct: 793 WYVEFSKPLLQGEDEAAKAETQATMSW-VIDQCLILLHPIMPFITEELWGTL 843



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 8/53 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNA 65
           H+GHA+   + D+L R+HR+ G D L+  G D  G        +++AK A NA
Sbjct: 52  HMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMVVERELAKDASNA 104


>gi|307710823|ref|ZP_07647251.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617429|gb|EFN96601.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|195977313|ref|YP_002122557.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689784|sp|B4U0A1|SYL_STREM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|195974018|gb|ACG61544.1| Leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 833

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  E    PE I  ++R
Sbjct: 205 ADLEEVDWPESIKDMQR 221


>gi|113869093|ref|YP_727582.1| leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
           [Ralstonia eutropha H16]
 gi|113527869|emb|CAJ94214.1| Leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
           [Ralstonia eutropha H16]
          Length = 1343

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 506 KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 565

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 566 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKG 623

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y ++LL
Sbjct: 624 IAYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSG-AVVEKREIPMYYLRITEYAEELL 679

Query: 178 S 178
            
Sbjct: 680 G 680


>gi|195978584|ref|YP_002123828.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975289|gb|ACG62815.1| valyl-tRNA synthetase ValS [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-KKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +K FS    HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D  
Sbjct: 499 TGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+  
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEQVVSG 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 AAGNVTDRWILHNLNETIGKVTE 626



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++           KV  + D+ +   ++    L +S  D+ R   T ++      R 
Sbjct: 100 EQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSL-DYARDRFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|16752936|ref|NP_445207.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|7189579|gb|AAF38477.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
          Length = 1043

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   ++  F PAD    G D  R    ++   ++SA L
Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  +    +G IL + G K+SK L N   P  V++  G DALR +L+  +    +  
Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629

Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            F DK  +G+ K++   L N +   N  +       K  D       A+TE D+ ILS  
Sbjct: 630 RFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449
             V+ ++RE+M    ++ A+   ++ + ++  ++     ++ WE + T PDR  A + LY
Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAEDT-PDRRAAFSTLY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782


>gi|11498241|ref|NP_069467.1| isoleucyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122898|sp|O29622|SYI_ARCFU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2649988|gb|AAB90608.1| isoleucyl-tRNA synthetase (ileS) [Archaeoglobus fulgidus DSM 4304]
          Length = 1018

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 21/261 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +  VW D+      +  Y    D  + + WPAD    G D  R  F++    
Sbjct: 506 RVPD----VFDVWFDSGVASWGSIAYPLRKDKFE-ELWPADFITEGHDQTRGWFYSQLGT 560

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +     P  K V  HGF L  +G K+SKSLGNV++P EV+ ++GVD  R +++     
Sbjct: 561 SVVCFDKAPY-KAVLMHGFTLDEQGRKMSKSLGNVVEPEEVVGQIGVDGFRLYVLYSAPW 619

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILSVC 394
               F  ++   + +N  L N + N V  + + M L +Y       G     D  ILS  
Sbjct: 620 EDLRFSWEEA--RNINRML-NVVWNAVRFAHTYMSLDNYS--FGEKGELKIEDRWILSRL 674

Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR-YFDAQKP--WELKKTNPDRASTVLYV 450
              ++E  E M+   +HR +       V +  R Y    +P  WE ++ +P + +   Y 
Sbjct: 675 ESFIKEANEAMEGYQVHRVVRAFFDFFVEDFSRWYIQIIRPRVWE-ERDSPSKLAA-YYT 732

Query: 451 TVEVIRQLAILLQAFVPKLAN 471
              VI +    +  F P +A 
Sbjct: 733 MFRVIDRSLRAIAPFAPLIAE 753



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQN 64
           K Y      Y   + H+G A+  ++ D + R+ R+ G     T G D HG  I  K  Q 
Sbjct: 35  KFYFVDGPPYTTGRIHLGTAWNKVLKDTILRYKRMMGFAPTDTPGWDMHGLPIEVKVEQE 94

Query: 65  AGVTTK 70
            G  TK
Sbjct: 95  LGFRTK 100


>gi|296115214|ref|ZP_06833855.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978315|gb|EFG85052.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 898

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P D+ V G DI+     +W A ++   L  
Sbjct: 468 VLDTWFSSALWPFSTLGWPDQTP-ELARYYPTDVLVTGFDII----FFWVARMMMMGLHF 522

Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K     KVF HG +   +G+K+SKS GN IDP+E+I+  G DA+R+ +      G+D
Sbjct: 523 MKDVPFRKVFIHGLVRDERGQKMSKSKGNGIDPLEMIDTYGADAMRFTICALTGLGRD 580



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA  M + D L R+ R+ G DVL+  GTD           +AG+ T++ V++
Sbjct: 50 HVGHALTMTLQDTLIRWRRMQGRDVLWQPGTD-----------HAGIATQLVVER 93


>gi|225869700|ref|YP_002745647.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782514|sp|C0M8N3|SYL_STRE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225699104|emb|CAW92273.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 833

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  E    PE I  ++R
Sbjct: 205 ADLEEVDWPESIKDMQR 221


>gi|327470389|gb|EGF15845.1| valine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++           KV  + D+ +   ++    + IS  D+ R   T ++      R 
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGISV-DYSRERFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|260431038|ref|ZP_05785009.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414866|gb|EEX08125.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 1053

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 19/132 (14%)

Query: 220 IPDDPQYIMY-VWIDA------LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRF 270
           I  DP  ++Y VW D        ++ L   G L  P+ ++   +++P D+ + G DIL F
Sbjct: 601 IDRDPTKLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEQTEELQRYFPTDVLITGFDILFF 660

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDA 324
               W A ++   L +  ++  H   LH      KG+K+SK+ GNVIDP+E+++E G DA
Sbjct: 661 ----WVARMMMMQLAVVNEIPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADA 716

Query: 325 LRYFLVREIACG 336
           LR+      A G
Sbjct: 717 LRFTNASMAAIG 728



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA+   + D+L R+HR+ G D L+  G D  G
Sbjct: 52 HVGHAFNNTLQDILIRWHRMRGFDTLWQPGQDHAG 86


>gi|95930682|ref|ZP_01313416.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133334|gb|EAT14999.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 850

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  DKEKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFKRLQGYNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G+    +  +N  N R     + +SYD   +F  T +  ++   ++++ K+ +KG  
Sbjct: 91  IQHGIHPAKWTVENIANMRLQLKRMGLSYDWDREFA-TCDVDYYKWEQLIFLKMFEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +    +    +++V   A  +        V+  E + +FF+++ Y  +LL  
Sbjct: 150 YKKSSSVNWCPTCQTVLANEQVEDDACWRCGTV----VEDKELDQWFFKITNYAQELLDE 205

Query: 180 YESH---PEFILPIER 192
            +     P+ +L ++R
Sbjct: 206 IDKMAGWPDSVLTMQR 221


>gi|306830047|ref|ZP_07463233.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427760|gb|EFM30854.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+          D++  +V  +V+ +
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGLT--------LDQATANV-EKVVNK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|183983752|ref|YP_001852043.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M]
 gi|183177078|gb|ACC42188.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M]
          Length = 886

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 32/181 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                   A +P    VF HG 
Sbjct: 478 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGGDEVITLDGRRGAQVPF-TDVFLHGL 532

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I  + G K+SKS GNVIDP++ I+  G DALR+ L R  + G D    +D ++   N   
Sbjct: 533 IRDEFGRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGSDLAVGEDAVRASRN--- 589

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               G  +  +    L +   + P P  G  T++D  IL     V  E+     +    R
Sbjct: 590 ---FGTKLFNATRYALLNGAALAPLPPLGELTDADRWILGRLEEVRAEVDSAFDSYEFSR 646

Query: 413 A 413
           A
Sbjct: 647 A 647



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA E  + D L R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQTVVEKQLAADGKTKEDFGREL 119

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FVD+                R + D +D S D F  T ++      R ++K++ D G IY
Sbjct: 120 FVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGLIY 177

Query: 121 KG 122
           + 
Sbjct: 178 QA 179


>gi|86741959|ref|YP_482359.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568821|gb|ABD12630.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 662

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 104/540 (19%), Positives = 199/540 (36%), Gaps = 51/540 (9%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +++ +    PN   H+GH +   + AD   RF R++G ++   TG+D+    +   A+  
Sbjct: 122 VFVFSTPPTPNGDLHLGHLSGPYLGADAYVRFQRMNGANIWHLTGSDDFQSYVVDCARRE 181

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G +        S    +   ++DI  D +  T  +  +    +  + ++ D G I     
Sbjct: 182 GRSNAETAAHYSAEIAETLRLMDIPLDQYTVTNADPSYVPALKDFFTRLVDSGAIAPSDG 241

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN----------------PVQWMEEEG---- 164
              +  +   Y  + +V  G  G       N                PV     E     
Sbjct: 242 PALFDPKTGQYLYEVDVRGGCPGCGEITGGNICEECGEPNTVVDLADPVAKPSGEAPAAG 301

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               Y   L  +   +L +   H    +P   R       +    D+ +S  + DWGI  
Sbjct: 302 TVRRYVLPLHEHAGTVLDH---HRRGRVPARLRELAARLFRRERVDIPVSHPS-DWGITP 357

Query: 221 --PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPAD----LHVIGKDILRFHAI 273
              +    +++VW +    +L     L    G       P D    +H  G D   +HAI
Sbjct: 358 HEANGAGQVIWVWPEMAFGFLHGIQKLGERIGRDWTAAEPTDDWKIVHFFGYDNSFYHAI 417

Query: 274 YWPAFLLSANLPLPKKV-----FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +P       L LP          + F L+ G K S    + I   ++++   VDA+RYF
Sbjct: 418 LYPVLY---QLALPGWTPDIDYHVNEFFLYDGLKFSTGRRHAIWGKQILDAGSVDAVRYF 474

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L R     +   ++ D  +  +   L       ++     +   YDG+ P  G +T    
Sbjct: 475 LARSRPEAQRTNFELDAYEHTLATTLIGTWQAWLNDLGQHVADHYDGVAPDAGNWTPEHA 534

Query: 389 SILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
             LS  +  L  +  +++     +++A A++ +LV++  R+   ++        P+   T
Sbjct: 535 GFLSQLAARLGALTASLRPGGFSLNQAAAELDALVADALRFSRRERVLARAGGMPNEVRT 594

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG---FMLHKTF 503
              + +     LA      +P+ A ++ + L     ++ + S  + + PG    + H TF
Sbjct: 595 ATALELAAAALLAHGAAPVMPRFAVRLAEALGQPAPDQ-WPSTVELIPPGSKVTLAHTTF 653


>gi|242052287|ref|XP_002455289.1| hypothetical protein SORBIDRAFT_03g007890 [Sorghum bicolor]
 gi|241927264|gb|EES00409.1| hypothetical protein SORBIDRAFT_03g007890 [Sorghum bicolor]
          Length = 958

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 103 KPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMKGFNVLHPMGWDAFGLPAEQYA 162

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+  ++N   FR     L  SY  D  I TTE  ++   + ++ ++  +G  Y
Sbjct: 163 IETGTHPKITTERNIGRFRTQLKSLGFSYDWDREISTTEPAYYKWTQWIFLQLLKRGLAY 222

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ V   ++   Y     P+ QWM       R+++Y D+LL
Sbjct: 223 QAEVPVNWCPALGTVLANEEVVDGVSERGGYPVIRKPMRQWM------LRITSYADRLL 275



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 33/177 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P +V+ E G D+LR + +          +   G++      +   +G  
Sbjct: 718 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE-----GVHRFLGRT 772

Query: 362 VSRSVSMILKD---YDGMIPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRALAQV 417
              +V   L D    DG   T    T     +L  C +RV +EI+E   N          
Sbjct: 773 WRLTVGPQLPDGSYNDGTTTTEDEPTLDQLRVLHKCIARVTEEIQETRFN---------- 822

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            + +S +  + +A   WE   T P            VI    +LL  F P LA +++
Sbjct: 823 -TAISAMMEFVNAAYKWE---TQPK----------TVIESFVLLLSPFAPHLAEELW 865


>gi|15672798|ref|NP_266972.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|14285774|sp|Q9CHB6|SYL_LACLA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12723739|gb|AAK04914.1|AE006315_3 leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326406367|gb|ADZ63438.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 829

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+   +  W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 201

Query: 176 LLSYYES--HPEFILPIER 192
           LL   E    PE I  ++R
Sbjct: 202 LLEDLEEVDWPESIKEMQR 220


>gi|312867069|ref|ZP_07727279.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097198|gb|EFQ55432.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVNSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|296876999|ref|ZP_06901043.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432034|gb|EFH17837.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D
Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|270292202|ref|ZP_06198417.1| valine--tRNA ligase [Streptococcus sp. M143]
 gi|270279730|gb|EFA25572.1| valine--tRNA ligase [Streptococcus sp. M143]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 40 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 88

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 89 ATQAKVEERLR 99


>gi|157151226|ref|YP_001449942.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076020|gb|ABV10703.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 882

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 501

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  +  
Sbjct: 502 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSY 560

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 561 EKMDASWN--FINKIWN-ISRYILM 582



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D           +AG+
Sbjct: 39 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMD-----------HAGI 87

Query: 68 TTKVFVDQNSR 78
           T+  V++  R
Sbjct: 88 ATQAKVEERLR 98


>gi|322388969|ref|ZP_08062540.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144338|gb|EFX39745.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 1218

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 778 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 833

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 834 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 893

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 894 FSYEKMDASWN--FINKIWN-ISRYILM 918



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 375 SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 434

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 435 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 492

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 493 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 540


>gi|119467784|ref|XP_001257698.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119405850|gb|EAW15801.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 958

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA 
Sbjct: 48  RPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAAI 107

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y+
Sbjct: 108 ERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYQKGLAYQ 167

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL---- 177
                 Y   D+    +++V   A+G  + +    V+ ++ + +FFR++ +++ LL    
Sbjct: 168 AEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDLD 224

Query: 178 SYYESHPEFILPIER 192
           S   + PE +L ++R
Sbjct: 225 SLTGAWPERVLTMQR 239


>gi|241205056|ref|YP_002976152.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858946|gb|ACS56613.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 838

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y      YP+ A  H+GH       D+  R+ R+ G +VL   G D  G    + A
Sbjct: 30  RPKFYALDMFPYPSGAGLHVGHPLGYTATDITCRYKRMRGFNVLHPMGWDSFGLPAERHA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              GV   +   +N   FR     L  SYD   +F  TT+  +    + ++ K+ +KG  
Sbjct: 90  MRTGVHPDITTKRNIETFRGQVQRLGFSYDWSREFA-TTDPAYVRWTQWIFLKLFEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+   +  +     A   D+EV    DG+Y     +PV       +  R++AY D+LL
Sbjct: 149 YQEEIAVNWCPAQNAVLADEEV---KDGRYVETG-DPVIRRRMRQWMLRITAYADRLL 202


>gi|90419373|ref|ZP_01227283.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336310|gb|EAS50051.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 947

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 17/258 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DI+ F    W A ++   L  
Sbjct: 520 VLDTWFSSALWPFSTLGWPDQTP-ELATYYPTSVLVTGFDIIFF----WVARMMMMGLEF 574

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V+ H  +  K G K+SKS GNV+DP+++I+E G DALR+ L    A G+D  
Sbjct: 575 MDEEPFHTVYVHALVRDKTGAKMSKSKGNVVDPLDLIDEFGADALRFTLAIMAAQGRDVK 634

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D   +    N      + N  +R   M    + G +         +  I++   R + E
Sbjct: 635 LDPQRIAGYRN--FGTKLWN-ATRFAEMNGAVHGGTLDPSQLSLPLNRWIVTELGRTIAE 691

Query: 401 IRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
               +     + A A +   V  +  D Y +  KP  L  ++   A+ V +V   V+ ++
Sbjct: 692 TETAIAAYRFNEAAATLYRFVWNLFCDWYVELAKP-ALMGSDEAAANEVRHVMGSVLDRI 750

Query: 459 AILLQAFVPKLANKIFDI 476
             LL  F+P +  +++ +
Sbjct: 751 YALLHPFMPFITEELWQV 768


>gi|309799540|ref|ZP_07693769.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116816|gb|EFO54263.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 883

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 606

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K+Y+     YP+ + H+GH     I DV+ARF R  G  VL   G D  G     AA
Sbjct: 28  EGKKVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGYRVLHPMGWDAFGLPAENAA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    ++    L  SY  D  I T +  ++   + ++ K  ++G  Y
Sbjct: 88  IKQGIHPADWTYKNIAYMKNQLKRLGFSYDWDREIATCDPEYYRWNQWIFLKFYERGLAY 147

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +      +   DE    +++V    DG+ +     PV   E   ++ +++ Y D+LL 
Sbjct: 148 RKLAEVNWCPNDETVLANEQV---IDGRCWRCG-TPVIKKEVPSWYLKITHYADRLLE 201


>gi|15645767|ref|NP_207944.1| valyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501065|sp|P56000|SYV_HELPY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2314306|gb|AAD08195.1| valyl-tRNA synthetase (valS) [Helicobacter pylori 26695]
          Length = 874

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 484 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 538

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N  S
Sbjct: 539 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAAS 592



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 58 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 92


>gi|331695815|ref|YP_004332054.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950504|gb|AEA24201.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 874

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 9/255 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  +  + +++P    V G DIL F  +    F   A    
Sbjct: 452 VLDTWFSSGLWPFSTLGWPDKTEDLE-RYYPTSALVTGYDILFFWVVRMMMFGTYAMGAT 510

Query: 287 P-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P + V+ HG I  + G K+SKS GNVIDP+E+I+  G DALR+ + R    G D     +
Sbjct: 511 PFRHVYLHGLIRDEHGRKMSKSKGNVIDPLELIDAYGADALRFTIARGSNPGTDMSLSDE 570

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +    N      + N    +++       G+ P   + T++D  IL    +V Q+    
Sbjct: 571 WVAASRN--FTTKLWNATRFAIANGADAAAGL-PATESLTDADRWILGRLHQVRQQTDAL 627

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +++    +A   +     +   D Y +  KP +L       A+    V   V+  L  LL
Sbjct: 628 LEDFQFAKATEGLFHFTWDELCDWYIELAKP-QLADPASTTAANTRAVLGHVLDALLRLL 686

Query: 463 QAFVPKLANKIFDIL 477
              VP +   ++  L
Sbjct: 687 HPIVPFVTEALWTGL 701


>gi|313792292|gb|EFS40393.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
          Length = 826

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA 
Sbjct: 38  RERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAAI 97

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKG 117
             G     +    +D  + +F+  A    +S+D  +R  T+++ ++   + L+ +  +KG
Sbjct: 98  KHGTHPAEWTYRNIDTQAASFKRYA----VSFDWSMRLHTSDEEYYRWTQWLFNRFFEKG 153

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             Y K  ++ W    D+    +++V  G            Q N  QW      +FR++ Y
Sbjct: 154 LAYRKDSWANWCP-NDQTGLANEQVKDGCCERCGAVVTKRQLN--QW------YFRITDY 204

Query: 173 QDKLLSYYES----HPEFILPIER 192
             +LL   +      PE +L ++R
Sbjct: 205 AQRLLDDIDQIEGKWPERVLSMQR 228



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 24/190 (12%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +++ + G ++++G  +SKSLGN +D  + I+E GVDA+R  ++        G  D+D   
Sbjct: 577 QRLMNQGQVINEGRAMSKSLGNGVDLGKQIDEFGVDAVRTTVIFA------GPPDEDIDW 630

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             V+            R  S +  D D  +      T+ D ++  V  R + +I E ++ 
Sbjct: 631 ADVSPASTLKFLQRAWRVASEVTSDPDADL------TQGDSTLRRVTHRSIADITELLEG 684

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +  +A+++ LV+   +  D+         +P           E +   A  L    P
Sbjct: 685 GRYNVVVARIMELVNATRKAIDSG----CGPADP--------AVREAVTFTAQALSLVAP 732

Query: 468 KLANKIFDIL 477
            LA +++++L
Sbjct: 733 YLAEEMWEML 742


>gi|212638274|ref|YP_002314794.1| leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226731223|sp|B7GK53|SYL_ANOFW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212559754|gb|ACJ32809.1| Leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 805

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + A
Sbjct: 30  KRKFYALDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F ++N  NFR     L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNDPAEFTEKNINNFRRQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLYEKGLAY 149

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV     + +  R++AY D+LL  
Sbjct: 150 MDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVIRKPMKQWMLRITAYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            E    PE I  ++R
Sbjct: 205 LEELDWPESIKEMQR 219



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+SK
Sbjct: 520 KWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++E  G D LR + +          +   GL         +G    + R 
Sbjct: 580 SKGNVVNPDDIVESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             + +++   + P      E+D ++  V  + ++++ E+ +    + A++Q++  ++E 
Sbjct: 631 WRLFVEENGELNPKIVDNPETD-TLERVYHQTVKKVTEDYEALRFNTAISQLMVFINEA 688


>gi|323704166|ref|ZP_08115745.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536232|gb|EGB26004.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 927

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 34/158 (21%)

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++YE   E ILP   R E  S         +  RK  D           IM VW D+ ++
Sbjct: 500 AWYELSAEEILPQGTRCECGS---------TEFRKETD-----------IMDVWFDSGSS 539

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSH 293
           ++     L+  +G +   WPADL++ G D    H  ++ + LL++     +   K V +H
Sbjct: 540 HVAV---LETTEGLR---WPADLYLEGSDQ---HRGWFQSSLLTSVATKGIAPYKNVLTH 590

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GF++  +G K+SKSLGN IDP +V++E G D LR + V
Sbjct: 591 GFVVDGEGRKMSKSLGNGIDPADVVKEYGADILRLWAV 628


>gi|91763307|ref|ZP_01265271.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717720|gb|EAS84371.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 875

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 22/275 (8%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           ++K ++  + +  DP  ++  W  +      T G+ DN +    KF+P  + V G DI+ 
Sbjct: 433 AKKFYNKDVDLIRDPD-VLDTWFSSGLWPFATLGWPDNKEYVD-KFYPTSVLVTGFDIIF 490

Query: 270 FHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           F    W A ++   +    K     V+ H  +   KG+K+SKS GNVI+P+++IE+   D
Sbjct: 491 F----WVARMIMFGMEFLDKEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIEKYSAD 546

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           ALR+ L+   + G D    +D +K   N    L N    L++ +      D+  +   P 
Sbjct: 547 ALRFTLLSMASPGTDVKLSEDRVKGYRNFLNKLWNANNFLITNNC-----DFSKIDEKPI 601

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT 439
                ++ I +       +I +N+++     A          S  D Y +  K   L   
Sbjct: 602 LSININKWIYAELIETKNKIEKNLKDYRFDEAAKNAYQFTWHSYCDWYLELSKT-ILFSE 660

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +      +  V+  V +Q+ ILL  F+P +  +I+
Sbjct: 661 DEKAKDEIRQVSAYVFKQILILLHPFIPFVTEEIW 695



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 26/129 (20%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + K   S  I  PN     H+GHA    I D+L R+HR++  + L+  GTD         
Sbjct: 29  KNKKQFSVVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTD--------- 79

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118
             +AG+ T+  V++  +   D  D  +I  + FI      ++ H D      KK+     
Sbjct: 80  --HAGIATQALVEK--KLTADGIDKNEIGREKFIEKVWEWKEEHGDIILNQLKKL----- 130

Query: 119 IYKGCYSGW 127
              GC   W
Sbjct: 131 ---GCSCDW 136


>gi|319947518|ref|ZP_08021750.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746458|gb|EFV98719.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 883

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G+T           KV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGITRYDLGREKFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|281491310|ref|YP_003353290.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281375051|gb|ADA64569.1| Leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 829

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+   +  W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 201

Query: 176 LLSYYES--HPEFILPIER 192
           LL   E    PE I  ++R
Sbjct: 202 LLEDLEEVDWPESIKEMQR 220


>gi|253998286|ref|YP_003050349.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984965|gb|ACT49822.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 826

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH     I DVL+RFHR+ G +V+   G D  G     AA
Sbjct: 31  DKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMKGFNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  + +     L +  D    I T +  ++   + L+ ++  KG IY
Sbjct: 91  IKNNVAPAGWTYSNIEHMKTQLKSLGLGIDWQREIATCKPEYYRWEQWLFTELFKKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   +  +   D+    +++V    DG+ + +    V+  +   YF +++AY D+LL+  
Sbjct: 151 KKTATVNWDPVDQTVLANEQVI---DGRGWRS-GAIVEKRDIPQYFMKITAYADELLADL 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DKLEGWPEQVKTMQR 221



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        LL  + P   K+ + G +L  G K
Sbjct: 523 RANYWLPVDQYIGGIEHAILHLLYARFFNKLMRDVGLLKNDEPF-NKLLTQGMVLKDGSK 581

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP  +IE+ G D  R F++
Sbjct: 582 MSKSKGNTVDPQALIEQYGADTARLFMM 609


>gi|227827689|ref|YP_002829469.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584893|ref|YP_002843395.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511516|sp|C3N5S5|SYI_SULIA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511517|sp|C3MVH6|SYI_SULIM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|227459485|gb|ACP38171.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019943|gb|ACP55350.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 1049

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW D+   +  + G   +      +  P DL + G D LR     W   LL + L L  K
Sbjct: 525 VWFDSGVAFFASLG--KDWQEKWKELGPVDLVLEGHDQLRG----WFFSLLRSGLILLDK 578

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YD 342
                V  HGF+L  +G ++ KSLGN ++P  VI+  G D LR +L+R        F + 
Sbjct: 579 APYVSVLVHGFMLDEQGREMHKSLGNYVEPSVVIQRYGRDILRLWLLRNTTWEDARFSWR 638

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L KR   DL       V  S+ M L +++ +  T     +     D  ILS  + +L
Sbjct: 639 ALELTKR---DLQIIWNTYVFASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSML 695

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ E+M+N  +H     +I+ LV +V R++     ++ W   + N      + Y+   +
Sbjct: 696 KKVNESMKNYKVHEMANYLINFLVEDVSRFYIRLIRKRAW--IEANTQDKIAMYYILYFI 753

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           ++Q  IL    +P ++ KI+    V
Sbjct: 754 LKQWIILASTIIPFISEKIYKSFVV 778



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 2  KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          K REK        YP++  PHIG  +  +I D + R+ RL G  V    G D HG  I  
Sbjct: 36 KRREKFLFIDGPPYPSSPTPHIGTIWNKVIKDCILRYERLLGKKVHDQPGYDTHGLPIEV 95

Query: 61 AAQ 63
          A +
Sbjct: 96 ATE 98


>gi|255580737|ref|XP_002531190.1| valyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529231|gb|EEF31205.1| valyl-tRNA synthetase, putative [Ricinus communis]
          Length = 694

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 53/218 (24%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   E     ILP ER  ++ +   S +KD  +SR+ + WG +IP   
Sbjct: 421 WFVTMEPLAEKALRAVEKGELNILP-ERFEKIYNHWLSNIKDWCISRQLW-WGHRIPVWY 478

Query: 222 ----------------------------------DDPQYIMYVWIDALTNYLTTTGYLDN 247
                                              DP  ++  W  +     +T G+ D 
Sbjct: 479 IDGKNCEEDYIVARDADEALAKAHEKYGKDVNIYQDPD-VLDTWFSSALWPFSTLGWPDA 537

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKG 300
                 KF+P  +   G DIL F    W A ++      +  +P    V+ HG I   +G
Sbjct: 538 SSEDFKKFYPTTMLETGHDILFF----WVARMVMMGIEFTGTVPF-SNVYLHGLIRDSQG 592

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K+SK+LGNVIDP++ I++ G DALR+ L    A G+D
Sbjct: 593 RKMSKTLGNVIDPLDTIKDFGTDALRFTLALGTA-GQD 629


>gi|262172034|ref|ZP_06039712.1| leucyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893110|gb|EEY39096.1| leucyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 858

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|257125299|ref|YP_003163413.1| leucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049238|gb|ACV38422.1| leucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 892

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+    AYP+ + H+GH     I D +AR+ ++ G +VL   G D  G     AA 
Sbjct: 33  KENYYVLEMFAYPSGKLHVGHLRNYAIGDAIARYKKMKGFNVLHPFGWDSFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
           + G     +   N  N R    ++ +SYD    + T    ++   +  + ++  KG +Y 
Sbjct: 93  DNGAHPGKWTKANIDNMRRQMKLMGLSYDWNRELSTYTPEYYKWNQKFFIEMYKKGLVYK 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y  W    +    N+    +  DG+ +      V   E   ++F+++ Y ++LL  +
Sbjct: 153 KKSYVNWCPDCNTVLANE----QVEDGKCWRHGKTDVIQKELSQWYFKITEYAEELLQGH 208

Query: 181 ES----HPEFILPIER 192
           E      PE +L +++
Sbjct: 209 EELRGHWPEQVLTMQK 224



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 90/183 (49%), Gaps = 12/183 (6%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E+++E G D+ R F +      K+  ++ +GL         N +
Sbjct: 633 KVEKMSKSKNNGVDPEEIVKEYGSDSSRVFTLFAAPPEKELEWNMNGLAGAYR--FINRL 690

Query: 359 GNLVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             L+S +     K+    +       A +E D+ I     + ++++ +++++    + A+
Sbjct: 691 YLLISSTADFADKNVSKENNYGINLDARSEKDKEIQKKLHQTVKKVTDSIEDDFHFNTAI 750

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++++  Y    K   + K   D +S    V  EV+ ++ +L+  F P +A++++
Sbjct: 751 AAIMELLNDMTTY----KQNVIDKN--DISSESKKVWHEVLEKVILLIAPFAPHVADELW 804

Query: 475 DIL 477
             L
Sbjct: 805 SDL 807


>gi|297180926|gb|ADI17130.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_03O15]
 gi|297181498|gb|ADI17685.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_23I23]
          Length = 793

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+   H+GH     I D ++R+ RL G +VL   G D  G     AA
Sbjct: 31  KKPKYYCLSMLPYPSGNLHMGHVRNYAIGDAVSRYKRLKGFNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   +  K + ++N  N R+    L  SYD    + T++  ++   + L+ K  ++G  Y
Sbjct: 91  KGKNIHPKDWTEKNIENMREQLKSLGFSYDWSKELNTSDVSYYKFEQELFLKFYERGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            K     W  + DE    +++V  G  G    A+   V+  E + +F +++ Y D+L
Sbjct: 151 RKKSLVNWDPV-DETVLANEQVIDGK-GWRTGAE---VELKEIDTWFLKITDYADEL 202



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 89/189 (47%), Gaps = 27/189 (14%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
            K+W P DL++ G +    H +Y   F        ++  + P  KK+ + G +L  G K+
Sbjct: 500 TKYWLPVDLYIGGVEHAILHLLYSRFFFKALRDMDIVEGDEPF-KKLLTQGMVLKDGAKM 558

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP E I + G D++R F++      +   +  +GL+         G    + 
Sbjct: 559 SKSKGNTVDPKEYITKYGADSIRTFMIFASPPEQSLEWSDNGLE---------GCHKFLK 609

Query: 364 R--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           R  ++S  + + D        F +S   +   C ++ ++I ++ + +L ++  ++  + +
Sbjct: 610 RLWNLSTNISELD-----EKQFKDSKNQLTDECKKLFKKINDDYEKRLNLNTIVSSCMEI 664

Query: 421 VSEVDRYFD 429
           ++ ++  FD
Sbjct: 665 LNNINGRFD 673


>gi|123967106|ref|YP_001012187.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123201472|gb|ABM73080.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 918

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 32/286 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D    K++P  + V G DI+ F          +    +
Sbjct: 471 VLDTWFSSGLWPFSTLGWPNVNDEDFKKWYPNSVLVTGFDIIFFWVARMTMMGKTFTNKI 530

Query: 287 P-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GF 340
           P K V+ HG +     +K+SKS GN IDP+ +I++ G DALR+ L+RE+A  G+D    F
Sbjct: 531 PFKDVYIHGLVRDENNKKMSKSAGNGIDPLLLIDKYGSDALRFALIREVAGAGQDIRLDF 590

Query: 341 YDKDGLKKRVNA--DLANGIGN-----LVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             K+     V A  + AN + N     L++++ S   ++Y         F  SD+ ILS 
Sbjct: 591 DRKNDTSSTVEASRNFANKLWNATKFVLINKTFS---ENYLLSESDEKYFQLSDKWILS- 646

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRY--FDAQKPWELKKTNPDRAS 445
               L ++   + N LI   L +   L+ E       D Y  F  QK    +  N   + 
Sbjct: 647 ---KLNQLNSKVSNLLIEYKLGEAAKLLYEFTWNDFCDWYVEFSKQKFSNKELQNRQISE 703

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +L   ++V+  + +++  F+P +  +++  L +  E +   SL Q
Sbjct: 704 KIL---IKVLSDVLVMMHPFMPHITEELWHALQLKPE-QTLLSLQQ 745



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 13/76 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   + DV+ RF RL G +VL   GTD           +A +  +  +++  +N 
Sbjct: 57  HMGHAFNSSLIDVIIRFQRLLGKNVLCLPGTD-----------HASIAVQTILEKQLKN- 104

Query: 81  RDMADVLDISYDDFIR 96
            +  +  DI  +DF++
Sbjct: 105 -EGKNSGDIGREDFLK 119


>gi|317014539|gb|ADU81975.1| valyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 872

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N  S
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNATS 590



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|297518779|ref|ZP_06937165.1| methionyl-tRNA synthetase [Escherichia coli OP50]
          Length = 109

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 49/93 (52%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65 AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
           G+T +  + + S+  +      +ISYD++  T
Sbjct: 66 LGITPEQMIGEMSQEHQTDFAGFNISYDNYHST 98


>gi|126464978|ref|YP_001040087.1| isoleucyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126013801|gb|ABN69179.1| Isoleucyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 1058

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 27/273 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +M VW D+  ++    G+   P+  + +    D  V G D +R  F ++   
Sbjct: 519 RVPD----VMDVWFDSAISFYAANGH---PEKLRLEDVILDFIVEGHDQIRGWFFSLLRA 571

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L   + P    V  HGF L + G ++ KSLGN +   E IE  G D LR F V +   
Sbjct: 572 GVLGFQSKPY-NTVLVHGFALDEHGREMHKSLGNYVGTDEAIERAGRDPLR-FWVSQNTV 629

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESIL 391
            +D  +   G+ + +  DL       V  S  M L  YD +      + E     D+ +L
Sbjct: 630 WEDLRFSWRGIDE-IRRDLGIAWNTFVFASTYMNLDKYDPLQHRIDDYKEFLRYEDKWLL 688

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--AS 445
           S  + + ++I E+++   IH A  ++   + E     Y    +P  W +++  PD+  A 
Sbjct: 689 SRINSIAKKITESLEKYYIHEAARELRKFIVEDVSHWYIRLIRPRVW-VEENTPDKLAAY 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +VLY  +E   +   ++  F P LA KI+  +F
Sbjct: 748 SVLYYVLE---KWLRMMAPFTPFLAEKIYQEVF 777



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 15/121 (12%)

Query: 15  YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF 72
           YP+   PHIG A+   + D++ R+ R+ G +V    G D HG  I  K  Q  GV  K  
Sbjct: 52  YPSGDVPHIGTAWNKTLKDIVLRYKRMRGYNVFDRPGYDCHGLPIEVKVEQKLGVKVKRE 111

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           +++             I  D F+   +K   +  + L K   + G ++    + + +LRD
Sbjct: 112 IEEK------------IGVDKFVNECKKLVFNNIKSLTKWFKELG-VFMDWENPYLTLRD 158

Query: 133 E 133
           E
Sbjct: 159 E 159


>gi|125624531|ref|YP_001033014.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166231617|sp|A2RLY6|SYL_LACLM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124493339|emb|CAL98313.1| LeuS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071325|gb|ADJ60725.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 829

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+   +  W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 201

Query: 176 LLSYYES--HPEFILPIER 192
           LL   E    PE I  ++R
Sbjct: 202 LLEDLEEVDWPESIKEMQR 220


>gi|307637822|gb|ADN80272.1| Valyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325998009|gb|ADZ50217.1| Valyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 872

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N  S
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAAS 590



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|229592789|ref|YP_002874908.1| leucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511549|sp|C3K2L2|SYL_PSEFS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229364655|emb|CAY52580.1| leucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 868

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IYK
Sbjct: 92  KNNVAPAKWTYENIAYMKNQLRSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LLS
Sbjct: 152 KSGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLS 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDDLP 210


>gi|116511631|ref|YP_808847.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025501|sp|Q030E7|SYL_LACLS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116107285|gb|ABJ72425.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 829

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KTKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+   +  W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 201

Query: 176 LLSYYES--HPEFILPIER 192
           LL   E    PE I  ++R
Sbjct: 202 LLEDLEEVDWPESIKEMQR 220


>gi|149192007|ref|ZP_01870235.1| leucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834143|gb|EDL51152.1| leucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 513

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D     +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDLTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DNLEGWPEMVKTMQR 221


>gi|46579145|ref|YP_009953.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81405042|sp|Q72E47|SYV_DESVH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46448558|gb|AAS95212.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232983|gb|ADP85837.1| valyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 884

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 56/285 (19%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPA 277
           +  DP  ++  W  +     +T G+   PD +K  A F+P  + V G DIL F    W A
Sbjct: 443 LTQDPD-VLDTWFSSALWPFSTMGW---PDKTKDLATFYPTSVLVTGFDILFF----WVA 494

Query: 278 FLLSANL----PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   +     +P K V+ H  +   +G K+SKS GNVIDP+ +I++ G D+LR+ L  
Sbjct: 495 RMMMLGMHFMDEVPFKHVYLHALVRDGEGRKMSKSTGNVIDPLAMIDKYGTDSLRFTLAA 554

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D    +D ++   +    N + N    S+  + ++       P A         
Sbjct: 555 FAAMGRDIKLSEDRIEGYRH--FVNKVWNAARFSLMNLPEE------APAALD------- 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY-------------FDAQKPWELKK 438
                 L  ++      ++HR      S  + +D Y             ++    W L+ 
Sbjct: 600 ------LDNVKGMHHKWILHRLEELKASQAAGIDGYRFNEVAQGLYRFWWNEFCDWYLEL 653

Query: 439 TNPD------RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             PD      R +T  YV   V+R+  +LL  F+P +  +++  L
Sbjct: 654 IKPDMQAGGERQATAQYVLWTVLREALLLLHPFMPFVTAEVWQAL 698


>gi|325996420|gb|ADZ51825.1| Valyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 872

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N  S
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAAS 590



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|325687152|gb|EGD29175.1| valine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 882

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 19/265 (7%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLL 280
           DP  ++  W  +     +T G+ D       +++P    V G DI+ F    + +     
Sbjct: 440 DPD-VLDTWFSSALWPFSTMGWPDIDSADFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEF 498

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D 
Sbjct: 499 TGKSPF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDV 557

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESIL 391
            +  + +    N    N I N +SR + M          ++    +    A   +D  IL
Sbjct: 558 RFSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDAARENVAQVAAGQAGNVTDRWIL 614

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              +  + ++ EN        A   + + + +   D Y +  K   L   N D       
Sbjct: 615 HNLNETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRS 673

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V +  + Q+  LLQ  +P +  +IF
Sbjct: 674 VLLYTLDQILRLLQPIMPFVTEEIF 698



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SVVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|160872646|ref|ZP_02062778.1| leucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121445|gb|EDP46783.1| leucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 834

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH    ++ DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGHLHVGHVRNYVLGDVIARYQRMLGKNVLHPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              ++   +   N  + R     L +S+D    I T    ++   +  + ++  KG +YK
Sbjct: 92  EKKISPAKWTYSNISHMRKQFKQLGLSFDWSREITTCNPDYYRWEQWFFIQLYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              S  +   D+    +++V  G     G     +  P QW      FF+++AY D+LL+
Sbjct: 152 KNASVNWDPIDKTVLANEQVIDGRGWRSGALIERKEIP-QW------FFKITAYADELLN 204



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        LL++N P   ++ + G +L  G K
Sbjct: 518 RAKYWTPVDHYIGGIEHAVLHLLYARFFHKVLRDLGLLNSNEPF-TRLLTQGMVLKNGVK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN IDP ++I   G D LR F++
Sbjct: 577 MSKSKGNTIDPTQLISHYGADTLRLFIL 604


>gi|310643589|ref|YP_003948347.1| valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
 gi|309248539|gb|ADO58106.1| Valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
          Length = 888

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 9/179 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +  +  K +++P ++ V G DI+ F    + + A   +  +
Sbjct: 457 VLDTWFSSALWPFSTLGWPEQTEDLK-RYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEI 515

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +    G K+SKSLGN +DP++VIE+ G DA+RY +      G+D  +  
Sbjct: 516 PF-KDVLMHGLVRDADGRKMSKSLGNGVDPLDVIEQYGTDAMRYMISTSSTPGQDLRFRW 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401
           + +++  N   AN I N  SR   M L+      I   G  +  D  IL   +   ++I
Sbjct: 575 ERVEQARN--FANKIWN-ASRFALMNLEGVTAADIDITGDLSTVDRWILHRLNETSRDI 630



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D++ R  R+ G D L+  G D  G     K+ +  +  G+T        
Sbjct: 60  HIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREK 119

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                     +++D     +  M   LD S + F  T ++      R ++ K+  KG IY
Sbjct: 120 FLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERF--TLDEGLSKAVREVFVKLYKKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G     +        +D EV YK  +G  Y+ Q+
Sbjct: 178 RGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQY 212


>gi|152991206|ref|YP_001356928.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166231623|sp|A6Q512|SYL_NITSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151423067|dbj|BAF70571.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 815

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 18/182 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK+Y+ +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA 
Sbjct: 30  KEKMYVLSMFPYPSGRIHMGHVRNYTIGDAIARYYRKTGANVLHPIGWDAFGMPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------ISD 115
              V  K +  +N    R   D L +S+      +  R   TC  L+ K        + +
Sbjct: 90  KHKVHPKKWTYENIDYMRKELDALGLSF------SHDREFATCDPLYSKWEQSFIIDMWN 143

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G +Y+   +  +   D+    +++V    +G+ +      VQ  E E YF +++ Y  +
Sbjct: 144 RGLLYRKKAAVNWCPHDKTVLANEQV---IEGRCWRCDTEVVQ-KEIEQYFLKITDYAQE 199

Query: 176 LL 177
           LL
Sbjct: 200 LL 201



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 8/84 (9%)

Query: 255 FW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKS 306
           +W P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS
Sbjct: 528 YWMPVDQYIGGIEHAILHLLYARFFTKVLRDLGYVNLDEPFKRLLTQGMVLKDGAKMSKS 587

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV 330
            GN +DP E++ + G D  R F++
Sbjct: 588 KGNTVDPDEIVAKFGADTARLFIL 611


>gi|15612145|ref|NP_223797.1| valyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135055|sp|Q9ZK61|SYV_HELPJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4155674|gb|AAD06660.1| VALYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 872

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N  S
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLEN--NKNFANKLFNAAS 590



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+L R+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAG 90


>gi|260891332|ref|ZP_05902595.1| leucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858715|gb|EEX73215.1| leucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 892

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+    AYP+ + H+GH     I D +AR+ ++ G +VL   G D  G     AA 
Sbjct: 33  KENYYVLEMFAYPSGKLHVGHLRNYAIGDAIARYKKMKGFNVLHPFGWDSFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
           + G     +   N  N R    ++ +SYD    + T    ++   +  + ++  KG +Y 
Sbjct: 93  DNGAHPGKWTKANIDNMRRQMKLMGLSYDWNRELSTYTPEYYKWNQKFFIEMYKKGLVYK 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y  W    +    N+    +  DG+ +      V   E   ++F+++ Y ++LL  +
Sbjct: 153 KKSYVNWCPDCNTVLANE----QVEDGKCWRHGKTDVIQKELSQWYFKITEYAEELLQGH 208

Query: 181 ES----HPEFILPIER 192
           E      PE +L +++
Sbjct: 209 EELRGHWPEQVLTMQK 224



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 26/190 (13%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP E+++E G D+ R F +      K+  ++ +GL          G 
Sbjct: 633 KVEKMSKSKNNGVDPEEIVKEYGADSSRVFTLFAAPPEKELEWNMNGLA---------GA 683

Query: 359 GNLVSRSVSMILKDYDGMIPTPG----------AFTESDESILSVCSRVLQEIRENMQNQ 408
              ++R   +IL   D                 A +E D+ I     + ++++ +++++ 
Sbjct: 684 YRFINRLYLLILSTADFADKNATKEDNYGINLDARSERDKEIQKKLHQTVKKVTDSIEDD 743

Query: 409 L-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A+A ++ L++++  Y    K   + K   D +S    V  EV+ ++ +L+  F P
Sbjct: 744 FHFNTAIAAIMELLNDMTTY----KQNVIDKN--DISSESKKVWHEVLEKVLLLIAPFAP 797

Query: 468 KLANKIFDIL 477
            +A++++  L
Sbjct: 798 HVADELWSDL 807


>gi|323350983|ref|ZP_08086640.1| valine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122707|gb|EFX94416.1| valine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 882

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 24/264 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++   L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSADFKRYYPTSTLVTGYDIIPF----WVSRMIFQGLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        + ++    +    A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAQVAAGQAGNVTDRWILH 615

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  + ++ EN        A   + + + +   D Y +  K   L   N D       V
Sbjct: 616 NLNETISKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNDDEKVITRSV 674

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
            +  + Q+  LL   +P +  +IF
Sbjct: 675 LLYTLDQILRLLHPIMPFVTEEIF 698



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|224476754|ref|YP_002634360.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783557|sp|B9DND4|SYV_STACT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|222421361|emb|CAL28175.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 876

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P +  V G DI+ F    W A ++   L  
Sbjct: 443 VLDTWFSSGLWPFSTLGWPDVESEDYQRYYPTNALVTGYDIIFF----WVARMIFQGLEF 498

Query: 287 PKK-----VFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG +    G K+SKSLGN +DP++VI E G D+LRYFL    + G D  
Sbjct: 499 TGERPFDDVLLHGLVRAEDGRKMSKSLGNGVDPMDVINEYGADSLRYFLATGSSPGHDLR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           Y  + ++   N    N I N    S+  I +++
Sbjct: 559 YSTEKVESVWN--FINKIWNAARFSIMNIGEEF 589



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          ++ K   +  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G
Sbjct: 31 DKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDTLYLPGMDHAG 85


>gi|109947830|ref|YP_665058.1| valyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109715051|emb|CAK00059.1| valS [Helicobacter acinonychis str. Sheeba]
          Length = 872

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L      G+D       L+   N + AN + N VS
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCTTGRDIKLSTTHLEN--NKNFANKLFNAVS 590



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|254283790|ref|ZP_04958758.1| leucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219679993|gb|EED36342.1| leucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 813

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE  Y      YP+ + H+GH     IADV+ARF R+ G +VL   G D  G     AA 
Sbjct: 31  RETFYCLAMFPYPSGKLHMGHVRNYTIADVIARFQRMQGKNVLQPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V    +   N  + R     L  +YD   +F   T + ++   +  + ++ DKG  Y
Sbjct: 91  KNNVPPADWTLGNIDDMRTQLSRLGFAYDWSREFATCTPE-YYRWEQWFFTRLIDKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY- 179
           K      +   D+    +++V    +G+ +    NPV+      +F R++AY  +LL   
Sbjct: 150 KKEADVNWCETDQTVLANEQV---VNGRCWRCD-NPVERRSISQWFIRITAYAQELLDQL 205

Query: 180 --YESHPEFILPIER 192
              +  PE +  ++R
Sbjct: 206 DGLDGWPEQVKAMQR 220



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 37/209 (17%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKG 300
           D    ++ P D +V G +    H +Y   F        L+S++ P  K++ + G +L  G
Sbjct: 514 DAEADRWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLVSSDEPF-KRLLTQGMVLKDG 572

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRV---- 350
            K+SKS GN +DP  +I++ G D +R F +      + +     G        KR+    
Sbjct: 573 AKMSKSKGNTVDPQALIDQYGADTVRLFSMFAAPPDQSLEWSDSGVEGGHRFLKRLWRLV 632

Query: 351 ------------NADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSR 396
                        ADL NG  +L  ++   I K  D  G   T   F  +  +++ +C+ 
Sbjct: 633 SEATSRSTDTLDTADLNNGQKDLRRKTHETIAKVSDDYGRRQT---FNTAIAAVMELCNE 689

Query: 397 VLQEIRE-NMQNQLIHRALAQVISLVSEV 424
           + +  +E +  + +I  AL   + ++S V
Sbjct: 690 IGRHPQESDADHAVIDEALRAALQMLSPV 718


>gi|15605863|ref|NP_213240.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|6226187|sp|O66680|SYLA_AQUAE RecName: Full=Leucyl-tRNA synthetase subunit alpha; AltName:
           Full=Leucine--tRNA ligase subunit alpha; Short=LeuRS
 gi|2983033|gb|AAC06643.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 634

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 6/175 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+ + H+GH     I D +AR+ ++ G ++L   G D  G     AA   
Sbjct: 33  KFYVLEMFPYPSGRIHMGHVRNYTIGDAIARYLKMRGKNILHPMGWDAFGLPAENAAIKH 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+    +  +N    +    +L  SY  D  I T +  ++   + ++ K+ ++G  Y+  
Sbjct: 93  GIHPAKWTYENIDYMKKQLKILGFSYDWDREIATCDPEYYKWNQWIFLKMLERGIAYRKT 152

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
               +   D+    +++V +G   +       P+   E   +F R++AY D+LL 
Sbjct: 153 AKVNWCPHDQTVLANEQVIEGKCWRC----GTPIVQKEVPSWFLRITAYADRLLE 203


>gi|115524756|ref|YP_781667.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518703|gb|ABJ06687.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 965

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 25/262 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D+ D    +++P ++ V G DI+ F    W A ++   L  
Sbjct: 508 VLDTWFSSALWPFSTLGWPDD-DTDVKRYYPTNVLVTGFDIIFF----WVARMMMMGLHF 562

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P P  V+ H  +   KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D 
Sbjct: 563 MKDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDI 621

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                 ++   N   A  + N    +         G  PT    T  +  I     R ++
Sbjct: 622 KLASSRVEGYRN--FATKLWNACRFAEMNSCALPTGFDPTAAKAT-LNRWIAHETVRAVR 678

Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLYVTVEV 454
           E+ E ++    + A       V  V  D Y +  KP  + + +  +A T   V +   E+
Sbjct: 679 EVSEAIEAYRFNDAAGSAYRFVWNVYCDWYLELAKPVLMGEDSAAKAETRAMVAWARDEI 738

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           ++    LL  F+P +  +++ +
Sbjct: 739 LK----LLHPFMPFITEELWSV 756



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 13/77 (16%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + R+ +  +  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD       
Sbjct: 44  ERRDAVPYTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD------- 96

Query: 60  KAAQNAGVTTKVFVDQN 76
               +AG+ T++ V++ 
Sbjct: 97  ----HAGIATQMVVERQ 109


>gi|48477483|ref|YP_023189.1| isoleucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74568043|sp|Q6L206|SYI_PICTO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|48430131|gb|AAT42996.1| isoleucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 1024

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 114/268 (42%), Gaps = 34/268 (12%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
            Y++  W D+ +       Y  + D +K+ F P D      D  R  F+ ++  A LL  
Sbjct: 512 SYVIDTWFDSGSASYAAMHYPFSKDFTKSHF-PVDFITEAIDQTRGWFYTLHVVASLLFD 570

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                K V S   IL   G+K+SKS GN I  I+ + + G DA R F           F 
Sbjct: 571 ENAY-KNVVSISHILDENGQKMSKSKGNFIAAIDFLNDYGADAARMFF----------FT 619

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDES-------I 390
                 K VN  L   IG +  +++S +L  Y             FTE  E        +
Sbjct: 620 GAPWNSKSVNKKL---IGEITRKNLSTLLNVYSFFASNANIDEYRFTEIKEPENLLDRWM 676

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELK-KTNPDRAST 446
           LS  +  + ++RENM N  IH AL  +  L+SE+   +     ++ WE     + +RA +
Sbjct: 677 LSRLNTTIIKVRENMDNYNIHTALRYIEDLISELSNVYLRLSRKRFWEGNLDDSKERAYS 736

Query: 447 VLYVTV-EVIRQLAILLQAFVPKLANKI 473
            LY T+ E I+ +A +   F   L  K+
Sbjct: 737 TLYYTLRETIKMMAPITPFFSEYLYQKL 764


>gi|330835827|ref|YP_004410555.1| isoleucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329567966|gb|AEB96071.1| isoleucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 1055

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 18/264 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + ++ G  +  +    +  P DL + G D LR  F ++     +L+   P  
Sbjct: 530 VWFDSGVAFFSSLG--EEWERKWKELGPVDLVLEGHDQLRGWFFSLLRSGVILNDRAPY- 586

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           + V  HGF+L  +G ++ KSLGN ++P  VIE++G D LR  L+R        F  K   
Sbjct: 587 EAVLVHGFMLDEQGREMHKSLGNYVEPSVVIEKLGRDVLRLTLLRNTTWEDVKFSWKSLE 646

Query: 347 KKRVNADLANGIGNLVSRSVSM---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             + +  +   +   V+  +S+     +D +       A TE D  I+S    + Q+I E
Sbjct: 647 MAQRDLQIVWNVFLFVTMYMSLDNFDPRDMEMKDALRYARTE-DRWIISRFYNMRQKIEE 705

Query: 404 NMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQL 458
           +M++  +H     +++ + E V R++     ++ WE       R   VLY  +  ++++ 
Sbjct: 706 SMKDYKVHDLANYLMNFIIEDVSRFYLRLARKRAWE---EGTSRDKQVLYTILYHLLKEW 762

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
            +L    +P  A K++    V+D+
Sbjct: 763 IVLASTIIPYFAEKVYQNFVVSDK 786


>gi|86148573|ref|ZP_01066858.1| leucyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85833639|gb|EAQ51812.1| leucyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 858

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISD 115
                   +  +N    ++   +L   YD       KR   TC        +  + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WKREFATCTPEYYRWEQEFFTKLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G +YK   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y  +
Sbjct: 146 QGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEYAQE 201

Query: 176 L---LSYYESHPEFILPIER 192
           L   L   E  PE +  ++R
Sbjct: 202 LLDDLDNLEGWPEMVKTMQR 221


>gi|332108008|gb|EGJ09232.1| leucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 874

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D++AR+ R+ G++VL   G D  G     A
Sbjct: 30  QSKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGMNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +   N  + +     L +++D    + T +  ++   +  + K+ +KG  
Sbjct: 90  AIDNGVAPAKWTRANIADMKSQMQPLGLAFDWSREVATCDPGYYKWNQWFFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      +   D+    +++V    DG+ + +    V+  E  GY+  ++ Y D+LL+
Sbjct: 150 YKKTQVVNWDPIDQTVLANEQV---VDGRGWRSGAI-VEKREIPGYYLAITKYADELLA 204


>gi|291320072|ref|YP_003515330.1| valyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752401|emb|CBH40372.1| Valyl tRNA synthetase (Valine tRNA ligase)(VALRS) [Mycoplasma
           agalactiae]
          Length = 829

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 24/241 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++     K+  + +S  +     +R  + ++     + D +
Sbjct: 343 YSERSNAPVETLVMPQWFVKMDTLAKKVTEHLKSDDQVKFYPKRFIKTVNSWLKNIHDWT 402

Query: 209 LSRKTFDWGIKIP---DDPQYIMYV------WI---DALTNYLTTT----GYLDNP--DG 250
           +SR+ + WG +IP    D +  + V      W+   D L  + ++      +L  P  D 
Sbjct: 403 ISRQLW-WGHRIPAWYKDNEIKVQVDSPGEGWVQDSDVLDTWFSSGIAPFSFLGWPASDE 461

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLG 308
              +++P  L V G DI+ F  +    F L      P + V  HG +   +  K+SKSL 
Sbjct: 462 LLKRYYPTSLLVTGYDIIFFWVVRMYFFGLEFTGKKPFETVLLHGLVRDEQNRKMSKSLN 521

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP ++IEE G DALR+FLV     G D  +  +  K RV   L N + N ++R + M
Sbjct: 522 NGVDPSKIIEEYGSDALRFFLVTNSTPGLDTRFLLE--KVRVAWGLCNKLWN-IARYIDM 578

Query: 369 I 369
           +
Sbjct: 579 L 579



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA +  I D + RF +L+G D  +  G D  G
Sbjct: 51 HIGHALDQYIQDTILRFKKLEGYDTFYIAGMDHAG 85


>gi|218708739|ref|YP_002416360.1| leucyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782843|sp|B7VKF7|SYL_VIBSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218321758|emb|CAV17713.1| Leucyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 858

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISD 115
                   +  +N    ++   +L   YD       KR   TC        +  + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WKREFATCTPEYYRWEQEFFTKLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G +YK   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y  +
Sbjct: 146 QGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEYAQE 201

Query: 176 L---LSYYESHPEFILPIER 192
           L   L   E  PE +  ++R
Sbjct: 202 LLDDLDNLEGWPEMVKTMQR 221


>gi|159122373|gb|EDP47494.1| leucyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 988

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 77  DRPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 136

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 137 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYRKGLAY 196

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           +      Y   D+    +++V          A+   V+ ++ + +FFR++ +++ LL   
Sbjct: 197 QAEALVNYDPVDKTVLANEQVDSNGFSWRSGAK---VEKLKLKQWFFRITDFKEMLLKDL 253

Query: 178 -SYYESHPEFILPIER 192
            S   + PE +L ++R
Sbjct: 254 DSLTGAWPERVLTMQR 269


>gi|296535500|ref|ZP_06897687.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264170|gb|EFH10608.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 898

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+  N      K++P D+ V G DI+     +W A ++      
Sbjct: 468 VLDTWFSSALWPFSTLGW-PNKTAELEKYYPGDVLVTGWDII----FFWVARMMMMGIHF 522

Query: 282 -ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  K V+ HG +   KG+K+SKS GNVIDP+E+++  G DALR+ +      G+D
Sbjct: 523 MGDVPF-KTVYIHGLVRDEKGQKMSKSKGNVIDPLELVDSFGADALRFAIASLATPGRD 580



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          HIGHA    I D L R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 50 HIGHALTFTIQDTLIRWRRMQGRDALWQPGTD-----------HAGIATQMVVER 93


>gi|146324353|ref|XP_747587.2| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129556234|gb|EAL85549.2| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 988

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 77  DRPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 136

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 137 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYRKGLAY 196

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           +      Y   D+    +++V          A+   V+ ++ + +FFR++ +++ LL   
Sbjct: 197 QAEALVNYDPVDKTVLANEQVDSNGFSWRSGAK---VEKLKLKQWFFRITDFKEMLLKDL 253

Query: 178 -SYYESHPEFILPIER 192
            S   + PE +L ++R
Sbjct: 254 DSLTGAWPERVLTMQR 269


>gi|302680667|ref|XP_003030015.1| hypothetical protein SCHCODRAFT_77472 [Schizophyllum commune H4-8]
 gi|300103706|gb|EFI95112.1| hypothetical protein SCHCODRAFT_77472 [Schizophyllum commune H4-8]
          Length = 1076

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 21/248 (8%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL--PLP-KKVFSHGFILHK-G 300
            +N D  K+ F PA  H + + I +    ++   +LS +L    P + + +HG +L   G
Sbjct: 548 FENKDLFKSCF-PA--HFVCEGIDQTRGWFYTLLVLSTHLFGSAPWQNLITHGLVLAADG 604

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLAN--- 356
           +K+SKSL N  DP  +++  G DA R +LV   +  G +  + +DG+++ V+  L     
Sbjct: 605 KKMSKSLRNYPDPNHILDTYGADATRMYLVNSPVVRGDNLRFREDGVREVVSKVLLPWLN 664

Query: 357 ------GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                 G   L++++     K Y+   P P      D  IL+ C  +++ +RE M    +
Sbjct: 665 SFRFFLGHSALLTKTTGAEFK-YNAHAPLPNNIM--DRWILARCQSLIKLVREEMAAYRL 721

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +  + +++ L+ E+  ++       LK  N  +   + L    E +  L   L ++ P +
Sbjct: 722 YTIIPRLLGLIDELTNWYIRFNRKRLKGENGKEDTVSALNTLFEALFTLCRTLSSYTPFM 781

Query: 470 ANKIFDIL 477
              I+  L
Sbjct: 782 TENIYQAL 789


>gi|257094627|ref|YP_003168268.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047151|gb|ACV36339.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 879

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 12/181 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+ + H+GH     I DVLARFHR+ G +VL   G D  G     AA
Sbjct: 39  KRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMLGYNVLQPMGWDAFGMPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +D  I T    ++   + L+ ++ +KG IY
Sbjct: 99  MQNNVPPAQWTYANIDYMKAQLKRLGFAIDWDREIATCRPEYYRWEQWLFTRLYEKGLIY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P+       Y+ +++AY ++LL
Sbjct: 159 KRLGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYMQITAYAEELL 211

Query: 178 S 178
           +
Sbjct: 212 A 212


>gi|120404905|ref|YP_954734.1| valyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957723|gb|ABM14728.1| valyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 897

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 36/284 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ D+     AKF+P  + V G DIL     +W A ++  
Sbjct: 457 DPD-VLDTWFSSALWPFSTMGWPDH-TAELAKFYPTTVLVTGYDIL----FFWVARMMMF 510

Query: 281 ----------------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVD 323
                              +P  + VF HG I  + G K+SKS GN IDP++ +E  G D
Sbjct: 511 GTFVGDDPAITGGGARGPQVPF-ENVFLHGLIRDEHGRKMSKSRGNGIDPLDWVEMFGAD 569

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ L R  + G D    +D    R + + A  + N  +   +++       +P     
Sbjct: 570 ALRFTLARGASPGGDLAIGED--HARASRNFATKLFN--ATRFALLNGASPAPLPPSDQL 625

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD-AQKPWELKKTN 440
           T++D  IL     V  E+   + N    RA   +     +   D Y + A+     ++ +
Sbjct: 626 TDADRWILGRLEEVRIEVDAALDNYEFSRACESLYHFAWDEFCDWYLELAKVQLGQEEAH 685

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DILFVAD 481
             R + VL   ++V+ +L   +  FV ++  K     + L +AD
Sbjct: 686 TARTTAVLAFALDVLLKLLHPVMPFVTEVLWKALTGGESLVIAD 729



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 23/159 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + D L R  R+ G +VL+  G D  G   Q + +   +A   TK      +
Sbjct: 68  HMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQTVVEKQLSADGKTKEDFGREL 127

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T ++      R ++K++ D G IY
Sbjct: 128 FIDKVWDWKRESGGTIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLFDAGLIY 185

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      W  + + A  + +  Y+  +G+  + ++  ++
Sbjct: 186 QAERLVNWSPVLETAISDLEVKYEDVEGELVSFRYGSME 224


>gi|94501467|ref|ZP_01307986.1| leucyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426432|gb|EAT11421.1| leucyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 859

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 32  REKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYERMQGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   + D+N    +   + L   Y  D  + T +  ++   +  + K+ +KG  YK
Sbjct: 92  KNQTAPGKWTDENIAYMKGQLNSLGFGYDWDRELATCKPEYYRWEQWFFTKLVEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V +G   +       P++  E   +F R++ Y ++LL+
Sbjct: 152 KVSAVNWCPHDQTVLANEQVIEGCCWRC----DTPIERKEIPQWFIRITDYAEELLN 204


>gi|322377722|ref|ZP_08052212.1| valine--tRNA ligase [Streptococcus sp. M334]
 gi|321281487|gb|EFX58497.1| valine--tRNA ligase [Streptococcus sp. M334]
          Length = 883

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 25/203 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++   L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSADFKRYYPTSTLVTGYDIIPF----WVSRMIFQGLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + +    N    N I N +SR    IL + +G+         + E   +   +V+ +
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVVNK 603

Query: 401 IRENMQNQLIHRALAQVISLVSE 423
              N+ ++ I   L + I  V+E
Sbjct: 604 EAGNVTDRWILHNLNETIGKVTE 626



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|159044631|ref|YP_001533425.1| valyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912391|gb|ABV93824.1| valyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 1037

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 12/263 (4%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I +  DP  ++  W  +    + T G+ ++ +  + K++P    V G+DIL F       
Sbjct: 597 IPLVQDPD-VLDTWFSSGLWPIGTLGWPEDTEELR-KYFPTSTLVTGQDILFFWVARMMM 654

Query: 278 FLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L+    +P ++V+ HG +   KG+K+SKS+GNV+DP+E+I+E G DALR+      + 
Sbjct: 655 MQLAVTGEVPFREVYLHGLVRDAKGKKMSKSVGNVVDPLEIIDEYGADALRFSSAAMASL 714

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSV 393
           G  G    D  + +   +    + N  +R   M  +   +      PG     +  I+  
Sbjct: 715 G--GVLKLDLQRVQGYRNFGTKLWN-ATRFAEMNEVFTAHTQSAMPPGCTETVNRWIIGE 771

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            ++V + +   +     + A   + + V     D Y +  KP  L   +  +A T   V 
Sbjct: 772 TAKVREAVDTALAEYKFNDAANALYAFVWGKVCDWYVEFAKPLLLDGDDATKAET-RAVM 830

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
             V+ Q  ILL   +P +  +++
Sbjct: 831 AWVLDQCFILLHPIMPFITEELW 853



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 22/99 (22%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+ T++  +      
Sbjct: 52  HMGHAFNNTLQDILIRWKRMQGYDTLWQPGTD-----------HAGIATQMVTE------ 94

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           R+MA     +  +  R    R     R+  +K+  +G I
Sbjct: 95  REMA-----ANGEPTRAEMGRAKFLARVWEQKVKSRGTI 128


>gi|114799286|ref|YP_762228.1| leucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123128248|sp|Q0BWB5|SYL_HYPNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114739460|gb|ABI77585.1| leucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 855

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 12/177 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
           K ++     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA   
Sbjct: 37  KAFVLEMFPYPSGRLHMGHVRNYAMGDVVARHKRAKGYNVLHPMGWDAFGMPAENAAMER 96

Query: 64  --NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             + G  T   ++     FR +   LD S +    T +  ++   + L+ K+ DKG +Y 
Sbjct: 97  KVHPGKWTYANIESMKAQFRKLGLSLDWSRE--FATCDPDYYGAQQALFLKLMDKGLVYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  + +    N+  +    DG+ + +   PV+  E   +FF+++AY D LL
Sbjct: 155 KASKVNWDPVDNTVLANEQVI----DGRGWRS-GAPVEQRELTQWFFKITAYADDLL 206



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 37/184 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++   G D  R+F++ +    +D  + + G         A G   
Sbjct: 618 EKMSKSKKNTVDPDAIVATYGADVARWFVLSDSPPERDVEWTQSG---------AEGAAR 668

Query: 361 LVSRSVSMILK-DYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            V R  S +      G  P PG      A  +S+   ++   R ++E R N         
Sbjct: 669 FVQRVWSFVDSLPETGPFPAPGSDDVSTALRKSNHKAVAAIDRAIEEFRFN--------- 719

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                S ++ +  + +A     LKKT  D A+  L    E    LA  L  F+P LA   
Sbjct: 720 -----SAIATIHEWVNA-----LKKTESDPAT--LGARAEGADMLARCLVPFMPHLAEAC 767

Query: 474 FDIL 477
           ++ L
Sbjct: 768 WERL 771


>gi|294054919|ref|YP_003548577.1| leucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614252|gb|ADE54407.1| leucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 859

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 29/215 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGS------KAKFW-PADLHVIGKDILRFHAIY---WPA 277
           M  W  +   YL    Y+D  +G+      K ++W   DL++ G +    H +Y   W  
Sbjct: 543 MPQWAGSCWYYLR---YIDPKNGTALIDPEKEQYWGTPDLYIGGAEHAVLHLLYARFWHQ 599

Query: 278 FLLSANL---PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            L    +   P P KK+F  G IL + GEK+SKS GNV++P  +IE  G DALR +L+  
Sbjct: 600 VLFDLGVVSDPEPFKKLFHQGIILGEDGEKMSKSRGNVVNPETIIEGYGADALRCYLM-- 657

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESIL 391
                  F       K  N     GI   + R V  ++ D DG I T  GA    D    
Sbjct: 658 -------FLGPLEAMKPWNTKGIEGIARFL-RKVWRLVVDNDGQISTKIGASDALDPESD 709

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            V    ++++ E+ ++   + A++Q++  V+++ +
Sbjct: 710 RVLHATIKKVSEDYESLGFNTAISQMMICVNQLAK 744



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 3/180 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++   Y+     YP+ A  HIGH      +D L R+ +  G +VL   G D  G    +
Sbjct: 33  EDQPTFYVLDMFPYPSGAGLHIGHPEGYTASDALKRYKKAKGFNVLHPMGWDAFGLPTEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G        QN  NF      L  +YD    + TT+  +    + ++ ++  KG 
Sbjct: 93  YAIKTGTHPATTTKQNVANFTAQLSQLGFAYDWNREVNTTDPNYFKWTQWIFMQLFKKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y      W+         ++EV   A+G      + PV+      +  R++ Y ++L++
Sbjct: 153 AYVDEKPVWFCPELGTVLANEEVLNTAEGPRSERGNFPVERRPIRQWVLRITEYAERLIA 212


>gi|289434832|ref|YP_003464704.1| hypothetical protein lse_1467 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171076|emb|CBH27618.1| valS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 882

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 8/179 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D        F+P +  V G DI+ F    + + +   +   
Sbjct: 449 VLDTWFSSALWPFSTMGWPDTESEDYKHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGER 508

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 509 PF-KDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKFSF 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401
           + ++   N    N I N  SR V M L +     I        SD+ IL+  +  +Q +
Sbjct: 568 EKVESTWN--FINKIWN-ASRFVLMNLNEMKYSEIDLSNVTEVSDKWILTRLNETIQSV 623



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 31/171 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 44  SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAG-----IATQAKV 98

Query: 68  TTKVFVDQNSR------NFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
             K+  +  SR      NF D        Y DFIR                 T +    D
Sbjct: 99  EAKLKEENISRYDLGRENFIDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLSD 158

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             + ++ K+ +KG IY+G Y   W      A  + + ++K  +G +Y+ ++
Sbjct: 159 AVKKVFVKLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKY 209


>gi|217076607|ref|YP_002334323.1| leucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036460|gb|ACJ74982.1| leucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 825

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  EKPKFYDLVMFPYPSGTLHVGHVKNYVIGDIVARYKRMKGFNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  +V+  +N    R+    + ISYD    I T  + ++   + L+ K+ +KG  Y
Sbjct: 90  IKNKIHPEVWTFKNIETIRNQIKKIGISYDWKREIATCTEDYYKWTQWLFVKMYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +    +    +++V    DG+        V     E ++F+++ Y ++LL+
Sbjct: 150 KKKAAVNWCPSCQTVLANEQV---VDGKCERC-GTEVTLKHLEQWYFKITDYAERLLN 203



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 45/324 (13%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYL 239
           PE  LP++   +V  F+ +G   LSL  +  +        P       M  ++D+   YL
Sbjct: 448 PEEQLPVKLPKDV-EFLPTGQSPLSLDEQFLNTTCPKCGGPARREADTMDTFVDSSWYYL 506

Query: 240 --TTTGYLDNPDGSK-AKFW-PADLHVIGKDILRFHAIYWPAFLLSA---------NLPL 286
                   D P  SK   +W P D ++ G +    H +Y   F+            + P 
Sbjct: 507 RYVNPNLEDKPFESKDVNYWLPVDQYIGGVEHAVLHLLY-SRFITKVLHDMGYVDFDEPF 565

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +F+ G I   G K+SKS GNV+ P ++IE+ G D LR +++      KD  +   G+
Sbjct: 566 -TNLFTQGMIYKDGWKMSKSKGNVVSPDDMIEKYGADTLRTYILFMAPPEKDAEWSDAGI 624

Query: 347 K--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           +   R    L N I +++ +  ++  +  +          + ++ +     + +++I E+
Sbjct: 625 EGVHRFLKRLWNNIYSVLEKIKNVSAEKIE-------LKNKLEKDLRRKLHQSIKKITED 677

Query: 405 MQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++     + A+A ++ L +    Y +  +  +L           L +  E++ +LA++L 
Sbjct: 678 IEGGFKFNTAIAGLMELNNSFSDYLNKTEEKDLN----------LPLLRELVEKLALILS 727

Query: 464 AFVPKLANKIF-----DILFVADE 482
            F P +A +I+     D L V +E
Sbjct: 728 PFAPHMAEEIWHDLGNDTLIVNEE 751


>gi|170288577|ref|YP_001738815.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176080|gb|ACB09132.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 824

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 90  IEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 150 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 203



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 34/195 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 568 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 627

Query: 348 KRVNADLANGIGNLV-----SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            R    L N    ++       + +++LK+             +++ +      ++++I 
Sbjct: 628 HRFIKRLWNTFYTVLPFVKEENTENLVLKN------------STEKELRRKLHSIIKKIT 675

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           E+++     + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 676 EDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 723

Query: 460 ILLQAFVPKLANKIF 474
           + L  F P LA + +
Sbjct: 724 LALSPFAPHLAEEFW 738


>gi|84394388|ref|ZP_00993107.1| leucyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84374990|gb|EAP91918.1| leucyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 858

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISD 115
                   +  +N    ++   +L   YD       KR   TC        +  + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WKREFATCTPEYYRWEQEFFTKLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G +YK   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y  +
Sbjct: 146 QGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEYAQE 201

Query: 176 L---LSYYESHPEFILPIER 192
           L   L   E  PE +  ++R
Sbjct: 202 LLDDLDNLEGWPEMVKTMQR 221


>gi|261211999|ref|ZP_05926285.1| leucyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838607|gb|EEX65258.1| leucyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 858

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|121534787|ref|ZP_01666607.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306582|gb|EAX47504.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 826

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 8/179 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++ + Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 30  RQKPEYYVLEMFPYPSGHLHMGHVRNYSIGDVIARFKMMQGYNVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N  N R     L +SY  D  + T    ++   + L+     +G  
Sbjct: 90  AIKHGIHPAKWTWDNIANMRRQQQELGLSYDWDREVATCHPDYYRWTQWLFLLFYHRGLA 149

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W +  +    N+  V    DG+ +      V+  E E +FF+++AY D+LL
Sbjct: 150 YKKKAAVNWCNDCNTVLANEQVV----DGRCWRCDSVVVK-KELEQWFFKITAYADRLL 203



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           + +KA +W P D ++ G +    H +Y   F        L++ N P  K + + G ++  
Sbjct: 521 NSAKANYWMPVDQYIGGIEHAILHLLYSRFFTKVLKDAGLINVNEPF-KNLLTQGMVIKD 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G K+SKS GNV+ P E+I + G D  R F++
Sbjct: 580 GAKMSKSKGNVVSPEEIIGKYGADTARLFIL 610


>gi|42781306|ref|NP_978553.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81569209|sp|Q739A1|SYI2_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|42737228|gb|AAS41161.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 1033

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEDQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPDETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|257465980|ref|ZP_05630291.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917136|ref|ZP_07913376.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691011|gb|EFS27846.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 887

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 18/258 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    ++P    V G DI+ F       F L    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELELYYPTSTLVTGADIIFFWVARMIMFGLYEMK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P   VF HG +    G K+SKSLGN  +P+++I++ G DA+R+ ++   + G+D  + 
Sbjct: 509 DIPFHNVFFHGIVRDDLGRKMSKSLGNSPNPLDLIDQYGADAIRFSMIYNTSQGQDVRFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVL 398
           +  L+  +  + AN I N  SR V M L+D+D  I T       +   DE I+S      
Sbjct: 569 EKLLE--MGRNFANKIWN-ASRFVMMNLEDFD--INTFDVKEVKYELVDEWIISRLQETA 623

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + +   ++N  +  A   V   +     D Y +  K       +     T  YV   ++ 
Sbjct: 624 KAVETRLENFQLDDAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLWSMLE 683

Query: 457 QLAILLQAFVPKLANKIF 474
               LL  F+P ++ +I+
Sbjct: 684 SGLRLLHPFMPYISEEIW 701


>gi|240170920|ref|ZP_04749579.1| valyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 886

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 100/247 (40%), Gaps = 36/247 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                     +P    VF HG 
Sbjct: 478 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGGDDVITLDGRRGPQVPF-TDVFLHGL 532

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I  + G K+SKS GNVIDP+E ++  G DALR+ L R  + G D    +D +  R + + 
Sbjct: 533 IRDEFGRKMSKSKGNVIDPLEWMDTFGADALRFTLARGASPGGDLAIGEDAV--RASRNF 590

Query: 355 ANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
              + N    + ++   K  +  +P P   T++D  IL     V  E+     +    RA
Sbjct: 591 TTKLFNATRYALLNGATKPSEAPLPAPAELTDADRWILGRLEEVRAEVDSAFDSYEFSRA 650

Query: 414 LAQVISLVSEVDRYFDAQKPW--ELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              +       D + D    W  EL KT   +  S    V    +  L  LL   +P + 
Sbjct: 651 CEALYHFA--WDEFCD----WYVELAKTQLAEGLSHTTAVLAAALDTLLRLLHPVIPFIT 704

Query: 471 NKIFDIL 477
             ++  L
Sbjct: 705 EALWQAL 711



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA E  + D L R  R+ G +VL+  GTD  G   Q + +        TK      +
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEKQLAVDGKTKEDFGREL 119

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FVD+                R + D +D S D F  T ++      R ++K++ D G IY
Sbjct: 120 FVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGLIY 177

Query: 121 KG 122
           + 
Sbjct: 178 QA 179


>gi|327474501|gb|EGF19906.1| valine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 883

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 24/264 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++   L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSADFKRYYPTSTLVTGYDIIPF----WVSRMIFQGLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        + ++    +    A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVARENVAQVAAGQAGNVTDRWILH 615

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  + ++ EN        A   + + + +   D Y +  K   L   N D       V
Sbjct: 616 NLNETIGKVTENFDRFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNEDEKVITRSV 674

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
            +  + Q+  LL   +P +  +IF
Sbjct: 675 LLYTLDQILRLLHPIMPFVTEEIF 698



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|289423990|ref|ZP_06425779.1| leucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155565|gb|EFD04241.1| leucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 806

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 110/234 (47%), Gaps = 32/234 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKS 306
           K+ P D ++ G +    H +Y   F        ++ ++   K + + G +L  G K+SKS
Sbjct: 511 KWLPVDQYIGGVEHAILHLLYARWFTKAFNKMGMTKHVEPFKNLLTQGMVLMDGSKMSKS 570

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN++ P+E++E+ G D  R F++      +D  + + G++         G    ++R  
Sbjct: 571 KGNIVSPVEMVEKYGADTARLFILFAAPPERDLEWSEQGVE---------GCFKFLNRVF 621

Query: 367 SMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
            ++  L D   +    G  T+ D+++ +  +  L+++ E++ ++   + A+A ++ L+++
Sbjct: 622 RVVDELADIAKVNHEFGELTKEDKAMRAKTNSTLKKVSEDLSDKFGFNTAIAALMELIND 681

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +Y       EL   N         V  E I  + ++L  F P L  +++ ++
Sbjct: 682 LYKYK------ELDTRND-------AVIKEAIEAVVVILAPFAPHLGEELWSMI 722



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV    +   N    +D   +L +SYD   +   +T + +  T +I  K + +     
Sbjct: 92  KHGVHPHKWTMANIEEMKDQLSMLGLSYDWDKEVATSTPEYYKWTQKIFLKFLENDLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K  +  W    +    N+  V    DG         V+  E E ++F+ + + ++LL+
Sbjct: 152 KKSFVNWCPSCETVLANEQVV----DGHCERCD-TLVEKKELEQWYFKTTEFSEELLA 204


>gi|228939323|ref|ZP_04101915.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228972201|ref|ZP_04132816.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978816|ref|ZP_04139185.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228780892|gb|EEM29101.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228787514|gb|EEM35478.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820347|gb|EEM66380.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326939899|gb|AEA15795.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 1033

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++  LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNAAREIAVLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|315221983|ref|ZP_07863894.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188949|gb|EFU22653.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 890

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDIEAEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 498 TGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISRYILM 582



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 93

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 94  EARLAEDGISR 104


>gi|239828095|ref|YP_002950719.1| leucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511545|sp|C5D6D7|SYL_GEOSW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|239808388|gb|ACS25453.1| leucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 805

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N   FR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTEKNINTFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV     + +  R++AY D+LL 
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVIRKPMKQWLLRITAYADRLLE 203

Query: 179 YYES--HPEFILPIER 192
             E    PE +  ++R
Sbjct: 204 DLEELDWPESVKEMQR 219



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 19/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P ++IE  G D LR + +          +   GL         +G  
Sbjct: 574 NEKMSKSRGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGAR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   + + +   + P      E+D ++  V  + ++++ E+ +    + A++Q++ 
Sbjct: 625 RFLDRVWRLFVDENGNLNPKIVDNPETD-TLERVYHQTVKKVTEDYEALRFNTAISQLMV 683

Query: 420 LVSEV 424
            ++E 
Sbjct: 684 FINEA 688


>gi|148992322|ref|ZP_01822045.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488257|ref|ZP_02712456.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147928948|gb|EDK79960.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183573136|gb|EDT93664.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332074380|gb|EGI84856.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 883

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 15/189 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPNTETTDFKRYYPNSTLVTGYDIIPFWVSRMIFQGIEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDARFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        +  D    + T  A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAHDNVTKVATGEAGNVTDRWILHNLN 618

Query: 396 RVLQEIREN 404
             + ++ EN
Sbjct: 619 ETIAKVTEN 627



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|159903416|ref|YP_001550760.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687104|sp|A9BAE4|SYL_PROM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|159888592|gb|ABX08806.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 872

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 5/187 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y  +   YP+   H+GH    +I DV+AR HR+ G  VL   G D  G     A
Sbjct: 44  EDQKTFYALSMFPYPSGNLHMGHVRNYVITDVIARVHRMKGFSVLHPMGWDAFGLPAENA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTEK-RHHDTCRILWKKISDKGDI 119
           A    +   ++ ++N  + R   D L +S D D  +TT K  ++   + ++ K+ + G  
Sbjct: 104 AIERNIQPDIWTEKNISHMRSQLDRLGLSIDWDREQTTSKSEYYKWTQSIFLKLYEAGLA 163

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ADG+ + +    V+  + + +F +++ Y + LL  
Sbjct: 164 YQKSATVNWDPVDKTVLANEQV--DADGKSWRSGA-LVEKKQLKQWFLKITDYAEILLKD 220

Query: 180 YESHPEF 186
            ++  E+
Sbjct: 221 IDTLTEW 227


>gi|317051073|ref|YP_004112189.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946157|gb|ADU65633.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 822

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 26/193 (13%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++ + G +L  G+K+SKSLGN++DP E+I+  G D +R F +      KD  +++ G++ 
Sbjct: 566 RLLTQGMVLLGGKKMSKSLGNIVDPDEMIQRYGADTVRLFTLFASPPEKDLEWNESGVE- 624

Query: 349 RVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                   G    + R   ++ +D   Y     +PG  ++    +     + ++ + +NM
Sbjct: 625 --------GAFRFLGRLWRLVHEDTTRYGRSAESPGELSDDARKLQQKLHQTIKRVTQNM 676

Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +     + A+A  + LV+E+  + D         T+P  +   L+   E +  L  LL  
Sbjct: 677 EGHYHFNTAIAATMELVNEMTPFSD---------TSP--SGKALF--QEALEALCRLLAP 723

Query: 465 FVPKLANKIFDIL 477
           FVP +  +++  L
Sbjct: 724 FVPHICEELWQDL 736



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y    + YP+ + H+GH     I D +AR+ ++ G +VL   G D  G     AA 
Sbjct: 34  RPKFYCLEMLPYPSGRIHMGHVRNYAIGDAIARYKKMRGYNVLHPMGWDAFGLPAENAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +   N    +     L  SYD    + T  + +    + L+ ++  KG IY+
Sbjct: 94  AHNMDPGEWTWSNIAYMKQQLQKLGFSYDWERELATCSEEYAAFEQQLFIELYKKGLIYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL- 177
                 +    +    +++V +G    DG       + V   E E +FFR++AY D+LL 
Sbjct: 154 KKAEVNWCDHCKTVLANEQVEEGRCWRDG-------SEVLKKELEQWFFRITAYADELLE 206

Query: 178 ---SYYESHPEFILPIER 192
              +  +  PE +L ++R
Sbjct: 207 GLDTLTDGWPERVLTMQR 224


>gi|242238544|ref|YP_002986725.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130601|gb|ACS84903.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 860

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   VL   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIEYMKNQLKVLGFGYDWDREVTTCRPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFVKITAYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|262402700|ref|ZP_06079261.1| leucyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351482|gb|EEZ00615.1| leucyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 858

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+ +
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|152990758|ref|YP_001356480.1| valyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166225524|sp|A6Q3R4|SYV_NITSB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|151422619|dbj|BAF70123.1| valyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 871

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 28/223 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKS 306
           KF+P DL + G DIL F    W A ++         LP  K V+ H  +  + G+K+SKS
Sbjct: 484 KFYPNDLLITGFDILFF----WVARMMMMGEHFLHKLPF-KDVYLHALVRDEHGQKMSKS 538

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVIDPI+ IEE   DALR+ L      G+D    K+ L+  +  +  N + N  +R +
Sbjct: 539 RGNVIDPIDTIEEYSADALRFTLAALAVQGRDIRLSKERLE--LYRNFTNKLYN-AARFL 595

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +  + +D +       T+  + ILS     +QE+R N+ +   + A   +   +     
Sbjct: 596 QIHQEKFDDL-QNIQIKTDLGKYILSRFGLAIQEVRNNLNSYRFNDAATTLYRFLW--GE 652

Query: 427 YFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           + D    W  EL K N D  + +  +  E ++    LL  F+P
Sbjct: 653 FCD----WGIELSKVNKDAIAELGAIFKESMK----LLHPFMP 687



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG + L+  GTD  G
Sbjct: 54 HIGHALTFTLQDIMVRYKRMDGYETLWQPGTDHAG 88


>gi|78188366|ref|YP_378704.1| valyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170565|gb|ABB27661.1| valyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 902

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 39/278 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +    LTT G+ D    ++    F+P +  V G DI+ F    W A ++ A L
Sbjct: 458 VLDTWFSSWLWPLTTLGWTDRQSDNENLRAFYPTNTLVTGPDIIFF----WVARMIMAGL 513

Query: 285 ------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P     F+      KG K+SKSLGN  DP++V+E  G DALR+ ++     G+D
Sbjct: 514 YFKGSIPFRDVYFTSILRDLKGRKLSKSLGNSPDPLKVMETYGTDALRFTIIYISPLGQD 573

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE-------SIL 391
             + ++  K  +  + A  I N    +  ++    +    +P  F  + +       +  
Sbjct: 574 VMFGEE--KCELGRNFATKIWN----ATRLLFMQREKFFASPEEFAATFQAFDPHAVTFS 627

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQ-----VISLVSE------VDRYFDAQKPWELKKTN 440
           S  + +LQ  R N   Q  H A +Q     ++ L+ +       D Y +A K   L   N
Sbjct: 628 SAETWLLQ--RYNAMLQRYHYACSQFRVNDMVKLLYDFFWGDYCDWYLEALKV-RLATCN 684

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + A   L + ++V+      L   +P L ++I+  L 
Sbjct: 685 REEAQQSLALALKVLEGTLQTLHPVMPFLTDEIWHHLL 722


>gi|251790538|ref|YP_003005259.1| leucyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539159|gb|ACT07780.1| leucyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 860

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIEYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|224011916|ref|XP_002294611.1| valine--tRNA ligase-like protein [Thalassiosira pseudonana
           CCMP1335]
 gi|220969631|gb|EED87971.1| valine--tRNA ligase-like protein [Thalassiosira pseudonana
           CCMP1335]
          Length = 891

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 36/248 (14%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFI-LHKGEKISKS 306
           ++F+P      G DIL F    W A ++   + L      + ++ HG +    G K+SK+
Sbjct: 453 SRFYPGTCLETGYDILFF----WVARMVMLGIELTGVSPFQVIYLHGLVRAADGSKMSKT 508

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP++ + E G D+LRY LV  +  G+D   + D  K   N   AN + N      
Sbjct: 509 KGNVVDPLDTVAEYGADSLRYSLVTGVTPGQDIPLNMD--KIAANKSFANKLWNCCKFVT 566

Query: 367 SMILKDYD----GMIPTPGAFTESDESILSVCSRVL----QEIRENMQNQLIHRALAQVI 418
              LKD D      +   G   + +   L++  R +     E+ E++ N +    L    
Sbjct: 567 DNALKDADEAELSSLGVNGPMGKEEFDTLALPERYIISKCHELVESVTNDIEKYQLGAAG 626

Query: 419 SLVSEV--DRYFDAQKPW--ELKKT--------NPDRASTVLYVTVEVIRQLAILLQAFV 466
           S + E   D+Y D    W  E+ KT          D A T   V V ++     LL  ++
Sbjct: 627 SKIYEFLWDQYAD----WYIEISKTRLYEGFGGGGDDAKTARRVLVYILDTSMRLLHPYM 682

Query: 467 PKLANKIF 474
           P +  +++
Sbjct: 683 PYVTEQLW 690



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA  + + DVLARFHR+ G  VL+T GTD  G
Sbjct: 11 HMGHAIFVALQDVLARFHRMRGRPVLWTPGTDHAG 45


>gi|320353933|ref|YP_004195272.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122435|gb|ADW17981.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 823

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 34  RPKYYVLEMFPYPSGRIHMGHVRNYSIGDVIARYKRMQGFNVLHPMGWDAFGLPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  +N    R     + +SY  D  + T    ++   + L+ K+ ++G IY+
Sbjct: 94  KRGIHPASWTYENIDYMRGQLKAMGLSYDWDRELATCGPEYYRWEQQLFLKMLERGLIYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +    +     ++V    DG  +     PV      G+FF+++ Y ++LL+  +
Sbjct: 154 KETTVNWCDDCQTVLAREQVI---DGTCWRCDQ-PVLPKTMHGWFFKITDYAEELLADLD 209

Query: 182 ---SHPEFILPIER 192
                PE ++ ++R
Sbjct: 210 KLGGWPEKVVTMQR 223



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 16/184 (8%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D   A +W P D ++ G +    H +Y   F         LS + P    + + G ++  
Sbjct: 522 DREAAAYWLPVDQYIGGVEHAILHLLYARFFTKMLRDLGYLSVDEPF-TNLLTQGMVIKD 580

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP E+I++ G D +R F +      +D  ++  G++    +   N + 
Sbjct: 581 GAKMSKSKGNVVDPNELIQQYGADTVRLFSLFAAPPERDLEWNAQGVEG--ASRFLNRVY 638

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            LV +++S   +     +    A  E   ++     + ++ + E++++    + A++ V+
Sbjct: 639 RLVVQNLSCFQQPAAVDL---TALNEPSRALYRKTHQTIRRVTESIESNFHFNTAISGVM 695

Query: 419 SLVS 422
            LV+
Sbjct: 696 ELVN 699


>gi|326202019|ref|ZP_08191889.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987814|gb|EGD48640.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 929

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ ++++     L+N +G     WPADL++ G D  R  F +    +       
Sbjct: 530 IMDVWFDSGSSHVAV---LENREGLS---WPADLYLEGSDQHRGWFQSSLLTSVATRKGA 583

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  KKV +HG+++  +  K+SKSLGN IDP +VI+E G D LR ++ 
Sbjct: 584 PY-KKVLTHGYVIDEEKRKMSKSLGNGIDPADVIKEYGADILRLWVA 629


>gi|269792595|ref|YP_003317499.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100230|gb|ACZ19217.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 927

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++L         +  K   WPAD+++ G D  R  F              
Sbjct: 533 IMDVWFDSGVSHLAVL------ETRKELGWPADMYLEGSDQHRGWFQTSLLTGIATRGKA 586

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  ++V +HGFI+  KG K+SKSLGNV+ P EVI++ G D LR ++ 
Sbjct: 587 PF-QQVLTHGFIVDGKGRKMSKSLGNVVSPQEVIDKYGADILRLWVA 632


>gi|261253668|ref|ZP_05946241.1| leucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937059|gb|EEX93048.1| leucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 858

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DNLEGWPEMVKTMQR 221


>gi|281412227|ref|YP_003346306.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373330|gb|ADA66892.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 824

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 90  IEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 150 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 203



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 36/209 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 568 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIE-- 625

Query: 350 VNADLANGIGNLVSR------SVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEI 401
                  G+   V R      +V   +K+   + ++       E    + S+  ++ ++I
Sbjct: 626 -------GVHRFVKRLWNTFYTVLPFVKEENTENLVLKNSTEKELRRKLHSIIKKITEDI 678

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               +    + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 679 EGGFK---FNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 723

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQS 488
           + L  F P LA + +  L   +EN   Q 
Sbjct: 724 LALSPFAPHLAEEFWHDL--GNENLVVQQ 750


>gi|218187412|gb|EEC69839.1| hypothetical protein OsI_00164 [Oryza sativa Indica Group]
          Length = 946

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 97  KPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMQGFNVLHPMGWDAFGLPAEQYA 156

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+  ++N   FR     L  SY  D  I TTE  ++   + ++ ++  +G  Y
Sbjct: 157 IETGTHPKITTERNINRFRSQLKSLGFSYDWDREISTTEPTYYKWTQWIFLQLLKRGLAY 216

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ +    DG      H PV       +  R+++Y D+LL
Sbjct: 217 QAEVPVNWCPALGTVLANEEVI----DGVSERGGH-PVIRKPMRQWMLRITSYADRLL 269



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 33/177 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 712 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 762

Query: 362 VSRSVSMILKD--YDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
           + R+  +++     DG        T+ + ++  L V  + +  + E +Q    + A++ +
Sbjct: 763 LGRTWRLVVGTPLPDGSYGVGTTVTDEEPTLDQLRVLHKCIARVTEEIQETRFNTAISAM 822

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  V       +A   W+   T P            VI    +LL  F P +A +++
Sbjct: 823 MEFV-------NAAYKWD---TQPK----------SVIESFILLLSPFAPHMAEELW 859


>gi|61657517|emb|CAI44428.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 843

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 49  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 109 IEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 169 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 222



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 34/195 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 587 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 646

Query: 348 KRVNADLANGIGNLV-----SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            R    L N    ++       + +++LK+             +++ +      ++++I 
Sbjct: 647 HRFIKRLWNTFYTVLPFVKEENTENLVLKN------------STEKELRRKLHSIIKKIT 694

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           E+++     + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 695 EDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 742

Query: 460 ILLQAFVPKLANKIF 474
           + L  F P LA + +
Sbjct: 743 LALSPFAPHLAEEFW 757


>gi|327462898|gb|EGF09219.1| valine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 882

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 14/152 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  
Sbjct: 440 DPD-VLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTGYDIIFF----WVSRMIFQ 494

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +L        + V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G
Sbjct: 495 SLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPG 554

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +D  +  + +    N    N I N +SR + M
Sbjct: 555 QDVRFSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SVVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|148981396|ref|ZP_01816392.1| leucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960888|gb|EDK26218.1| leucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 858

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DNLEGWPEMVKTMQR 221


>gi|307243131|ref|ZP_07525305.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493491|gb|EFM65470.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 806

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 98/206 (47%), Gaps = 35/206 (16%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKS GN + P+E++E+ G D  R F++      +D  + + G++
Sbjct: 552 KNLLTQGMVLMDGSKMSKSKGNTVSPVELVEKYGADTARLFILFAAPPERDLEWSEQGVE 611

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEI 401
                    G    ++R   ++    D + P        G  T++D+ + +  +  L+++
Sbjct: 612 ---------GCFKFLNRVYRLV----DELAPVAKLELEFGNLTKADKDMRAKTNNTLKKV 658

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            E++ ++   + A+A ++ L++++ +Y + +          DR   V+    E I+ + +
Sbjct: 659 TEDLNDKFGFNTAIAALMELINDLYKYKELE----------DRNDAVIK---EAIKAVVV 705

Query: 461 LLQAFVPKLANKIFDILFVADENRCF 486
           +L  F P L  +++  L +  E   F
Sbjct: 706 ILAPFAPHLGEELW--LMIGKEASVF 729



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y      YP+ + H+GH     I DV+ARF ++ G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMQGYNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              +   V+   N    ++   +L +SYD   +   +T + +  T +I  +         
Sbjct: 92  KNNIHPHVWTMSNIEEMKEQLSMLGLSYDWDKEVATSTPEYYKWTQKIFLEFYKASLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K  +  W    +    N+  V     GQ      + V+  E E ++F+ + + ++LL+
Sbjct: 152 KNSFVNWCPSCETVLANEQVV----QGQCERCD-SLVEKKELEQWYFKTTEFSEELLA 204


>gi|187918124|ref|YP_001883687.1| leucyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689284|sp|B2RZW1|SYL_BORHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119860972|gb|AAX16767.1| leucyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 842

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G      
Sbjct: 33  KEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N + F++    L  +Y  D  IRT ++ ++   + ++ K+  KG  
Sbjct: 93  AIQTGEHPKKITEKNIKKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y      WY        +++EV +  DG       + V+      +  +++ Y ++L+
Sbjct: 153 YTKEMPVWYCPDLGTVLSNEEVIQTPDGPRSERGFHKVKRKPLRQWILKITEYAERLI 210


>gi|317969890|ref|ZP_07971280.1| leucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 882

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 36  EAFYALSMFPYPSGNLHMGHVRNYVITDVVARVQRLRGKKVLHPMGWDAFGLPAENAAIE 95

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    + DQN  + RD  D L +S  +D  + T    ++   + L+ +  D G  Y+ 
Sbjct: 96  RGVDPGAWTDQNIASMRDQLDQLGLSIDWDRELATCHDDYYRWTQWLFLQFLDGGLAYQK 155

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL---LS 178
             +  +   D+    +++V    DG+  + +    V+  +   +F +++ Y  +L   LS
Sbjct: 156 DATVNWDPIDQTVLANEQV----DGEGRSWRSGALVEKRKLRQWFLKITDYAQQLLDDLS 211

Query: 179 YYESHPEFI 187
             E  PE +
Sbjct: 212 KLEGWPERV 220



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 37/203 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR----------V 350
           EK+SKS  N +DP  VI++ G D  R F++ +    KD  +D   ++ +           
Sbjct: 622 EKMSKSKYNGVDPALVIDKYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRIWRLA 681

Query: 351 NADLANGI----GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +A L  G+    G     SV+  L   +       A +E+++ +       +QEI +++ 
Sbjct: 682 DAALERGLSLAGGAGAPESVAERLGSGE-------ALSEAEQELRRAVHTAIQEITDDLD 734

Query: 407 NQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  + A+++++ L + +  +  A             +S VL    E +R L +LL  F
Sbjct: 735 GDVQFNTAVSELMKLSNAMGTHLAA-------------SSDVL--ACEALRTLLVLLAPF 779

Query: 466 VPKLANKIFDILFVADENRCFQS 488
            P LA +++  L    E+   ++
Sbjct: 780 APHLAEELWLKLGGRSEDEALEN 802


>gi|308183256|ref|YP_003927383.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065441|gb|ADO07333.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 872

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P    + G DIL F    W A +L  +      LP  K ++ H  +   KGEK+SKS 
Sbjct: 482 FYPNTTLITGFDILFF----WVARMLFCSESLLGELPF-KDIYLHALVRDEKGEKMSKSK 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           GNVIDP+E+IE+ G D+LR+ L    A G+D       L+   N + AN + N  S
Sbjct: 537 GNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLEN--NKNFANKLFNAAS 590



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA  + + D+LAR+ R+DG   L+  G D  G
Sbjct: 56 HIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAG 90


>gi|209885212|ref|YP_002289069.1| valyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873408|gb|ACI93204.1| valyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 956

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  D    +++P  + V G DI+ F    W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDT-DKEVKRYYPTSVLVTGFDIIFF----WVARMMMMGLHF 549

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               P P  V+ H  +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D
Sbjct: 550 MNDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTLAAMAAQGRD 607



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 13/77 (16%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          + RE    +  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD       
Sbjct: 31 ERREAEPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD------- 83

Query: 60 KAAQNAGVTTKVFVDQN 76
              +AG+ T++ V++ 
Sbjct: 84 ----HAGIATQMVVERQ 96


>gi|154687153|ref|YP_001422314.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166230608|sp|A7Z7V7|SYL_BACA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154353004|gb|ABS75083.1| LeuS [Bacillus amyloliquefaciens FZB42]
          Length = 804

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKQNIDNFRRQIQSLGFSYDWDREINTTDPDYYKWTQWIFTKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMRQWMLKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEDLDWPESIKDMQR 219



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 41/233 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P E++   G D LR + +          + + GL         +G    + R 
Sbjct: 580 SRGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---------DGARRFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             + +++   +    G  TE + E++  V    + ++ EN +    +  ++Q++  ++E 
Sbjct: 631 WRLFIEENGELT---GKVTEGAGETLERVYHETVMKVTENFEALRFNTGISQLMVFINE- 686

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                A K  EL +              E I     LL    P LA ++++ L
Sbjct: 687 -----AYKANELPR--------------EYIEGFVKLLSPIAPHLAEELWEKL 720


>gi|149181484|ref|ZP_01859980.1| leucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850885|gb|EDL65039.1| leucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 804

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F ++N   FR     L  SY  D  + TT+ +++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTEKNINTFRRQIKSLGFSYDWDREVNTTDPKYYKWTQWIFTKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMRQWMLKITAYADRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEDVDWPESIKDMQR 219



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 14/122 (11%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISKSLG 308
           P D+++ G +    H +Y   W  FL    +   K    ++F+ G IL    EK+SKS G
Sbjct: 523 PVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQRLFNQGMILGENNEKMSKSKG 582

Query: 309 NVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           NV++P E++   G D LR +      L   +A  ++G         RV   L +  GN+ 
Sbjct: 583 NVVNPDEIVSTHGADTLRMYEMFMGPLEASVAWSENGLDGSRRFLDRVWRLLVDENGNIS 642

Query: 363 SR 364
            +
Sbjct: 643 EK 644


>gi|83941191|ref|ZP_00953653.1| valyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83847011|gb|EAP84886.1| valyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 1013

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 38/277 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           ++I  DP  ++  W  +    + T G+ +  D   AK++P  + + G DI+ F    W A
Sbjct: 570 VEIRRDPD-VLDTWFSSGLWPIGTLGWPEQTD-ELAKYFPTSVLITGFDIIFF----WVA 623

Query: 278 FLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++     +  +     V+ H  +   KG+K+SKSLGNV+DP+++I+E G DA+R+ L  
Sbjct: 624 RMMMMQYAVVDQKPFDTVYVHALVRDEKGKKMSKSLGNVLDPLDLIDEYGADAVRFTLTA 683

Query: 332 EIACGKD--------GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             A G+D          Y   G  K  NA     + ++   SV+ +         T  + 
Sbjct: 684 MAAMGRDLKLSTARIAGYRNFG-TKLWNAHRFAEMNSVFEDSVAAV---------TYTSH 733

Query: 384 TESDES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK 437
           T+ D +    I+   +RV +E+   + N   + A   + + V     D Y +  KP  L+
Sbjct: 734 TQVDHTLNKWIIGETARVREEVDAALDNYRFNDAANALYAFVWGKVCDWYVELSKPL-LQ 792

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              P+ A T   +   V+ Q  +LL   +P +  +++
Sbjct: 793 DDAPEAAETRQTLKW-VLDQCLVLLHPIMPYITEELW 828



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 6   KLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K   S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           
Sbjct: 35  KETFSVMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQD----------- 83

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDF 94
           +AG+ T++ V++     +D     D + +DF
Sbjct: 84  HAGIATQMVVERELA--KDGKRRTDFTREDF 112


>gi|251793862|ref|YP_003008594.1| leucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535261|gb|ACS98507.1| leucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 862

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMKGKNVLQPFGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAKWTYENIAYMKKQLQILGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLNCLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 DLPQW 212


>gi|147673619|ref|YP_001216429.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|146315502|gb|ABQ20041.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012773|gb|ACP08983.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 894

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 68  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 181

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 234


>gi|148269892|ref|YP_001244352.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|172047877|sp|A5IKQ3|SYL_THEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147735436|gb|ABQ46776.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 824

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 90  IEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 150 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 203



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 34/195 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 568 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 627

Query: 348 KRVNADLANGIGNLV-----SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            R    L N    ++       + +++LK+             +++ +      ++++I 
Sbjct: 628 HRFIKRLWNTFYTVLPFVKEENTENLVLKN------------STEKELRRKLHSIIKKIT 675

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           E+++     + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 676 EDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 723

Query: 460 ILLQAFVPKLANKIF 474
           + L  F P LA + +
Sbjct: 724 LALSPFAPHLAEEFW 738


>gi|327461992|gb|EGF08321.1| valine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 883

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSADFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQ 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  +  
Sbjct: 503 PF-QNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|307130050|ref|YP_003882066.1| leucyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306527579|gb|ADM97509.1| leucyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 860

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIEYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|61657367|emb|CAI44284.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 843

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 49  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 109 IEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 169 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 222



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 36/209 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 587 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIE-- 644

Query: 350 VNADLANGIGNLVSR------SVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEI 401
                  G+   V R      +V   +K+   + ++       E    + S+  ++ ++I
Sbjct: 645 -------GVHRFVKRLWNTFYTVLPFVKEENTENLVLKNSTEKELRRKLHSIIKKITEDI 697

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               +    + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 698 EGGFK---FNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 742

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQS 488
           + L  F P LA + +  L   +EN   Q 
Sbjct: 743 LALSPFAPHLAEEFWHDL--GNENLVVQQ 769


>gi|15642942|ref|NP_227983.1| leucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919980|sp|Q9WY15|SYL_THEMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4980663|gb|AAD35261.1|AE001702_1 leucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 824

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 90  IEKGIHPEEWTRKNIATIRQQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 150 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 203



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 34/195 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 568 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIE-- 625

Query: 350 VNADLANGIGNLVSR------SVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEI 401
                  G+   V R      +V   +K+   + ++       E    + S+  ++ ++I
Sbjct: 626 -------GVHRFVKRLWNTFYTVLPFVKEENTENLVLKNSTEKELRRKLHSIIKKITEDI 678

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               +    + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 679 EGGFK---FNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 723

Query: 460 ILLQAFVPKLANKIF 474
           + L  F P LA + +
Sbjct: 724 LALSPFAPHLAEEFW 738


>gi|269119362|ref|YP_003307539.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613240|gb|ACZ07608.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 865

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 15/188 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++E  YI    AYP+   H+GH     I D +AR+ ++ G +VL   G D  G     
Sbjct: 28  VSDKENYYILEMFAYPSGNLHVGHLRNYTIGDAIARYKKMKGFNVLHPFGWDSFGL---- 83

Query: 61  AAQNAGVTTKV----FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKIS 114
            A+NA +  K     +  +N  N +    ++ IS+D    + T ++ ++   + ++ K+ 
Sbjct: 84  PAENAAIENKAHPGDWTRKNIDNMKRQLKLMGISHDWSRELATYQENYYKWNQWMFIKMY 143

Query: 115 DKGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +KG +Y K  Y  W    +    N+    +  DG+ +      V   E + ++F+++ Y 
Sbjct: 144 EKGLVYKKKSYVNWCPECNTVLANE----QVEDGKCWRHSKTDVIQKELDQWYFKITDYS 199

Query: 174 DKLLSYYE 181
           ++LL  ++
Sbjct: 200 EELLQSHD 207



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 21/181 (11%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS  N +DP  +++E G D+ R F +      K+  ++ +GL          G 
Sbjct: 614 KVEKMSKSKNNGVDPEVIVKEYGADSARVFSLFAAPPEKELEWNMNGLA---------GA 664

Query: 359 GNLVSRSVSMI--LKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
              ++R   +I   K++   G I   G     D  I     + ++++ E+M++    + A
Sbjct: 665 YRFLNRLFLLIEDTKEFSEAGEIDH-GKRNNEDSEIQKKLHQTVKKVSESMEDNFHFNTA 723

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A ++ L++++  Y   QK  +  K + +       +  EV+ +  ++L  F P +A+++
Sbjct: 724 IAALMELLNDMTSY--RQKVIDTGKISSESKK----IWREVMEKTVLMLSPFAPHIADEL 777

Query: 474 F 474
           +
Sbjct: 778 W 778


>gi|251798405|ref|YP_003013136.1| valyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546031|gb|ACT03050.1| valyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 883

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 8/150 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +  +  K +++P D+ V G DI+ F    + + A   +  +
Sbjct: 452 VLDTWFSSGLWPFSTLGWPEETEDFK-RYYPTDVLVTGYDIVYFWVARMIFTALEFTDQI 510

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +   +G K+SKSLGN +DP++VIE  G DA+RY +      G+D  +  
Sbjct: 511 PF-KDVLMHGLVRDAEGRKMSKSLGNGVDPLDVIENYGADAMRYMISTGSTPGQDLRFRI 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +++  N   AN I N  SR   M L+ +
Sbjct: 570 EKVEQARN--FANKIWN-ASRFALMNLEGF 596



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D++ R  R+ G D L+  GTD  G     K+ +  +  G++        
Sbjct: 55  HIGHALDFTLQDIIIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLREQGLSRYDLGREK 114

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +++       +  M   LD S + F  T ++      R ++ ++ +KG IY
Sbjct: 115 FLEQVWDWKELYAGTIREQWGKMGLSLDYSRERF--TLDEGLSKAVREVFVRLHEKGLIY 172

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +G     W      A  + +  YK  +G  Y+ Q+
Sbjct: 173 RGKKIINWDPAARTALSDIEVEYKELNGHLYHLQY 207


>gi|240277099|gb|EER40609.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 401

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 29/195 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    +  QN  N ++    +   +D                 W +    G  Y+  
Sbjct: 123 ERGIDPAKWTMQNIANMKEQLRAIGARFD-----------------WDRELMTGTAYQQK 165

Query: 124 YSGWYSLR--DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                S+R  D+    +++V   A+G  + +    V+ +E + +FFR++A+++ LL   E
Sbjct: 166 LE---SIRSDDKTVLANEQV--DANGCSWRSGAK-VEKLELKQWFFRITAFKEALLKDLE 219

Query: 182 S----HPEFILPIER 192
           S     PE +L +++
Sbjct: 220 SLEAGWPERVLSMQK 234


>gi|154279180|ref|XP_001540403.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150412346|gb|EDN07733.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 206

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 34/179 (18%)

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +R++L  + A   D  Y+   + +R    L  GIGNL SR    +L+           ++
Sbjct: 1   MRFYLTIDGAQTSDSDYENSYIVERYKKGLQWGIGNLASR----LLRGKK--------WS 48

Query: 385 ESDESILSVCSRVLQE------------IRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
             D  +L+   R+ ++            ++  M+     RAL  ++ ++ + ++YF   +
Sbjct: 49  VRDSVVLAAQGRLARDKHHGLLEAMPGRVKAEMEQLDPRRALNSIMEIIYQTNKYFHDMQ 108

Query: 433 PWEL---------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           PW L         ++ NP   S+ LY T E +R   ILLQ F+P  A ++ D+L VA E
Sbjct: 109 PWSLVNSQTQPQTQRQNPA-LSSALYTTAESLRIAGILLQPFMPHKAAELLDMLGVARE 166


>gi|121591023|ref|ZP_01678340.1| leucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121547133|gb|EAX57265.1| leucyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 894

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 68  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 181

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 234


>gi|294676053|ref|YP_003576668.1| valyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474873|gb|ADE84261.1| valyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 1017

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 12/110 (10%)

Query: 235 LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            ++ L   G L  P+ +    K++P D+ V G DIL F    W A ++   L +  ++  
Sbjct: 596 FSSGLWPIGTLGWPEATPEMRKYFPTDVLVTGFDILFF----WVARMMMMQLAVTGEIPF 651

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           H   LH      KG+K+SK+ GNVIDP+E+I+E G DALR+      A G
Sbjct: 652 HTVYLHQLVRDEKGKKMSKTAGNVIDPLEIIDEFGADALRFTNASMAAIG 701



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   + D+L R+HR+ G D L+  G D           +AG+ T++ V++     
Sbjct: 52  HVGHAFNNTVQDILIRWHRMRGFDTLWQPGQD-----------HAGIATQLMVEKELAKT 100

Query: 81  RDMADVLDISYDDFIR 96
           +  +   ++  D+F++
Sbjct: 101 QQPSRA-ELGRDEFLK 115


>gi|206603463|gb|EDZ39943.1| Isoleucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 976

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++L      D PD      WPADL++ G D  R  FH+    +  L    
Sbjct: 544 ILDVWFDSGISHLAVLK--DKPD----THWPADLYLEGSDQHRGWFHSSLLTSMALFDTP 597

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  +KV +HGF++  +G K+SKSL NVI P+E+I + G + LR +
Sbjct: 598 PY-RKVLTHGFVVDGQGRKMSKSLKNVISPLEIINKYGAEILRLW 641


>gi|183179693|ref|ZP_02957904.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|183013104|gb|EDT88404.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 894

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 68  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 181

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 234


>gi|61657385|emb|CAI44301.1| leucyl-tRNA synthetase [Thermotoga petrophila]
          Length = 843

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 49  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 109 IEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+
Sbjct: 169 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIRHLEQWFFKITDYAERLLN 222



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 34/195 (17%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++  
Sbjct: 587 LFTQGMIYKDGAKMSKSKGNVVSPDEMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 646

Query: 348 KRVNADLANGIGNLV-----SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            R    L N    ++       + +++LK+             +++ +      ++++I 
Sbjct: 647 HRFIKRLWNTFYTVLPFVKEENTENLVLKN------------STEKELRRKLHSIIKKIT 694

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           E+++     + A++ ++ LV+ + +Y ++  Q+ W  K            +  E++ +L 
Sbjct: 695 EDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWNRK------------LLREIVEKLT 742

Query: 460 ILLQAFVPKLANKIF 474
           + L  F P LA + +
Sbjct: 743 LALSPFAPHLAEEFW 757


>gi|50120248|ref|YP_049415.1| leucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|60390692|sp|Q6D7L6|SYL_ERWCT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49610774|emb|CAG74219.1| leucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 860

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|15640972|ref|NP_230603.1| leucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153823306|ref|ZP_01975973.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081130|ref|YP_002809681.1| leucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254285626|ref|ZP_04960590.1| leucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254848087|ref|ZP_05237437.1| leucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297581335|ref|ZP_06943259.1| leucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298498928|ref|ZP_07008735.1| leucyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655415|gb|AAF94118.1| leucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126519170|gb|EAZ76393.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|150424488|gb|EDN16425.1| leucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227009018|gb|ACP05230.1| leucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254843792|gb|EET22206.1| leucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297534651|gb|EFH73488.1| leucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297543261|gb|EFH79311.1| leucyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 894

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 68  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 181

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 234


>gi|324993629|gb|EGC25548.1| valine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995059|gb|EGC26972.1| valine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 882

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  
Sbjct: 440 DPD-VLDTWFSSALWPFSTMGWPDIDSADFKRYYPTSTLVTGYDIIPF----WVSRMIFQ 494

Query: 283 NLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L        K    HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G
Sbjct: 495 GLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPG 554

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +D  +  + +    N    N I N +SR + M
Sbjct: 555 QDVRFSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|322701499|gb|EFY93248.1| leucyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 962

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  Y+     YP+   H+GH     IAD +AR+HRL G DVL   G D  G     AA
Sbjct: 82  DRKTNYVLPMFPYPSGSLHLGHLRVYSIADTVARYHRLKGDDVLLPMGWDAFGLPAENAA 141

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   V+  +N +  ++    ++ S+D    +   +   +   + L+  + ++G  Y
Sbjct: 142 LERGIDPGVWTRRNIKKMKEQLGFMNGSWDWSRELTACDPEFYKHTQKLFLMLHERGLAY 201

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      Y   D+    +++V   A+G  + +    V+  + + +FFR S Y++ LL
Sbjct: 202 QAEAEVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRKLKQWFFRTSEYREALL 255


>gi|121729823|ref|ZP_01682256.1| leucyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628427|gb|EAX60921.1| leucyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 894

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 68  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 128 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 181

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 182 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 234


>gi|187734802|ref|YP_001876914.1| valyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424854|gb|ACD04133.1| valyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 890

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 37/285 (12%)

Query: 217 GIKIPDDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           G + P DP        +M  W    +++L     +D  + ++AKF+P    V G DI+ F
Sbjct: 445 GTEPPQDPDNWIQDNDVMDTW---FSSWLWPFSTMD--EETRAKFYPTTDLVTGPDIIFF 499

Query: 271 HAIYWPAFLLSANLPLPK-KVFSHGFILHK-----GEKISKSLGNVIDPIEVIEEVGVDA 324
               W A ++ A       K FS+ F         G K+SKSLGN  DP+++I   G D 
Sbjct: 500 ----WVARMIMAGYRFQHDKPFSNVFFTSIIRDKIGRKMSKSLGNSPDPLDLIANYGADG 555

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L+R    G D  +D++ + +  N   AN + N    +    L   D    T   ++
Sbjct: 556 LRFGLMRIAPTGTDVRFDENQISEGRN--FANKLYN----ATRFRLMQGDARGETAPHYS 609

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKK 438
               SI+S     L+++  +++  L       +I  + +       DR+ +A K      
Sbjct: 610 SVHISIIS----KLKQLHADVEKALADYEFNALIQTLYQFFWNEYCDRFLEAVKGDLKDG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +P   +  L     V+R    LL   +P +  +++  L  A+ N
Sbjct: 666 ADPAAQAATLTTMDTVLRHYLALLHPVMPHITEELWASLGFAESN 710



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 58/159 (36%), Gaps = 45/159 (28%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   S  I  PN     H+GH     I D+L R  R  G + L+  GTD          
Sbjct: 34  EKPAYSVVIPPPNVTGVLHLGHVLNNTIQDILVRRARQKGYEALWLPGTD---------- 83

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR-----ILWKKISDKG 117
            +AG+ T+V V++                 D  +TT +  HD  R      +W+     G
Sbjct: 84  -HAGIATQVRVEK-----------------DLKQTTGRSRHDLGREAFLEKVWEWKEKHG 125

Query: 118 DIY------KGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            I        GC   W    D   +  DE Y  A GQ +
Sbjct: 126 GIIINQLHKLGCSCDW----DRERFTMDEEYTKAVGQVF 160


>gi|254172256|ref|ZP_04878932.1| valyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214034152|gb|EEB74978.1| valyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 888

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  + + D   G++ AK W     P  L   G DI+R  A Y  +  +
Sbjct: 451 VLDCWVDSSITPLIISRWHDAIKGNEEAKRWFEHNFPTALRPQGTDIIRTWAFYTIFRTY 510

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +L+   P  + V  +G +    G K+SKS GNV+ P EVI + G DALR +       G+
Sbjct: 511 MLTGQKPW-RDVLINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTAL-APPGE 568

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +  + +    N      + N + R     L D+D     P      D  ILS   R+
Sbjct: 569 DHPFKWETVD--YNYRFLQKVWN-IYRFAERHLADFDPA-KAPEELEPLDRWILSRLHRL 624

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD---RASTVLYVTV 452
           ++   E M+    +    ++I+ V     D Y +  K + L   + +   +A T LY   
Sbjct: 625 IKFATEEMERYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKTALY--- 680

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E++  L +L+  FVP +  +++  LF
Sbjct: 681 ELLYNLMLLMAPFVPHITEELYQNLF 706



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG
Sbjct: 31 EKRPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMTGYNVLFPQGFDNHG 84


>gi|270307623|ref|YP_003329681.1| leucyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153515|gb|ACZ61353.1| leucyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 813

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 120/267 (44%), Gaps = 41/267 (15%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+ GY   P D  K ++W P DL+  G +    H  Y   F        ++    P  KK
Sbjct: 509 TSPGYDKGPFDPEKLRYWMPVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPF-KK 567

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L+      + G ++  GL   
Sbjct: 568 LFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYLMFVGPWDQGGEWNDSGL--- 624

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQ 408
                 +G+   ++R  ++  ++Y     TP  A  E++  +     + +++I  +++  
Sbjct: 625 ------SGMSRWLNRVWNLFTEEY-----TPKTASAEAERELKRTLHQTIKKITMDIERL 673

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  +A ++ L + + ++ +A             A+         ++  A++L    P 
Sbjct: 674 RFNTVVAALMELSNSLAKFKEA-------------AAISAESWQNSLKTFALMLAPIAPH 720

Query: 469 LANKIFDILFV--ADENRCFQSLDQRL 493
           +A +++  L +  +  N+ +   D+ L
Sbjct: 721 IAEELWANLGMEYSIHNQSWPKWDEEL 747



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 7/192 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL+G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLNGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHHIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V    DG  +  +  P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQV---VDGTCWRCE-TPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 -SHPEFILPIER 192
              PE I  ++R
Sbjct: 208 LDWPEKITAMQR 219


>gi|254420604|ref|ZP_05034328.1| isoleucyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186781|gb|EDX81757.1| isoleucyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 973

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 15/114 (13%)

Query: 227 IMYVWIDALTNY-------LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
           I+ VW DA + +       L   GY     G +   WPADL++ G D  R  F +     
Sbjct: 578 ILDVWFDAGSTHAFVLDPRLPEHGYT----GDRPAHWPADLYLEGSDQHRGWFQSSLLEG 633

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                  P  K V +HGF L  KGEK SKS GN  DP+ VI+E G D LR ++ 
Sbjct: 634 CGTRGRAPF-KAVLTHGFTLDEKGEKQSKSKGNTTDPLTVIKESGADILRLWVA 686


>gi|328946814|gb|EGG40951.1| valine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 883

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 24/264 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M          +++   +    A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLYAAREHVAQVAAGQAGNVTDRWILH 615

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  + ++ EN        A   + + + +   D Y +  K   L   N D       V
Sbjct: 616 NLNETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKE-VLYSDNDDEKVITRSV 674

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
            +  + Q+  LL   +P +  +IF
Sbjct: 675 LLYTLDQILRLLHPIMPFVTEEIF 698



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|302519062|ref|ZP_07271404.1| valyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427957|gb|EFK99772.1| valyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 873

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 7/177 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  D S AKF+P    V G DIL F       F L A    
Sbjct: 453 VLDTWFSSGLWPFSTLGWPEQTD-SVAKFYPNSTLVTGYDILFFWVARMMMFGLYAMDGT 511

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P   ++  HG +    G+K+SKS GN +DP++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFSEIVLHGMVRDQNGKKMSKSFGNAVDPLDWMDKYGSDALRFTLARGANPGVDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           + ++   N    N + N  +R   M     +G +P     + +D  ILS    V  +
Sbjct: 572 EWIQGSRN--FTNKLWN-ATRFALMNGATVEGALPPAERLSATDRWILSRLGEVTAQ 625


>gi|153951097|ref|YP_001397796.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166231594|sp|A7H2R6|SYL_CAMJD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152938543|gb|ABS43284.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 809

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    + ++ K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY +KLL
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAYAEKLL 201



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKELEWNDDAVE 624


>gi|172058142|ref|YP_001814602.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990663|gb|ACB61585.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 878

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 30/201 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221
           +F ++    +K L   +   +   +P    N  + ++++ ++D  +SR+ + WG +IP  
Sbjct: 362 WFVKMEPLAEKALQEQQGEDKINFIPQRFENTYVRWMEN-IRDWCVSRQLW-WGHRIPAW 419

Query: 222 ---------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                                +    ++  W  +     +T G+ +       K++P   
Sbjct: 420 YHKETGEVYVGKEAPADLENWEQDNDVLDTWFSSALWPFSTMGWPNEGAADYQKYFPTST 479

Query: 261 HVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
            V G DI+ F    + + ++  +   P    V  HG I   +G K+SKSLGN IDP++VI
Sbjct: 480 LVTGYDIIAFWVSRMIFQSYEFTGERPF-NDVLIHGLIRDSEGRKMSKSLGNGIDPMDVI 538

Query: 318 EEVGVDALRYFLVREIACGKD 338
           E+ G D+LR+FL      G D
Sbjct: 539 EKYGADSLRWFLTTGSTPGND 559



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-QKIAKA 61
           EK   +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D  G    AK 
Sbjct: 36  EKAPYTIVIPPPNVTGKLHLGHAWDTTLQDMLTRMKRMQGFDVLYLPGMDHAGIATQAKV 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------------TTEKRHHD 104
            Q      K  ++     F + +      Y   IR                 T ++   +
Sbjct: 96  EQKLRAEGKSRLEMGREKFLEQSWAWKEEYASTIREQWSKLGLGLDYSRERFTLDEGLSE 155

Query: 105 TCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYN 151
             + ++ K+ +KG IY+G Y   W      A  + + +YK  +G +Y+
Sbjct: 156 AVQEVFVKLYEKGLIYRGEYIVNWDPATKTAISDIEVIYKDIEGAFYH 203


>gi|332174449|gb|AEE23703.1| leucyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 870

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 20/245 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK Y  +   YP+ + H+GH     I DV++RF R++G +VL   G D  G     A
Sbjct: 31  EDKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRMNGKNVLQPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  QN    ++    L   Y  D  + T +K ++   +  + ++ +KG +
Sbjct: 91  ALNNNTAPAKWTYQNIDYMKNQLKSLGFGYDWDREVATCKKEYYRWEQWFFTRLYEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK   +  +   D     +++V  G     G     +  P QW      F +++ Y ++L
Sbjct: 151 YKKNSTVNWDPVDHTVLANEQVIDGRGWRSGALVEQKEIP-QW------FIKITDYAEEL 203

Query: 177 LS---YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           L+     E  PE +  +++    R+E +  +   L + +    +FD     PD    + Y
Sbjct: 204 LADLEQLEDWPEQVRAMQKNWIGRSEGVD-ITFNLSESAADISSFDVYTTRPDTLYGVTY 262

Query: 230 VWIDA 234
           V + A
Sbjct: 263 VAVAA 267


>gi|308070408|ref|YP_003872013.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305859687|gb|ADM71475.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 888

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 9/179 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +  +  K +++P ++ V G DI+ F    + + A   +  +
Sbjct: 457 VLDTWFSSALWPFSTLGWPEQTEDLK-RYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEI 515

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +    G K+SKSLGN +DP++VI++ G DA+RY +      G+D  +  
Sbjct: 516 PF-KDVLMHGLVRDADGRKMSKSLGNGVDPLDVIDQYGTDAMRYMISTSSTPGQDLRFRW 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEI 401
           + +++  N   AN I N  SR   M L+      I   G  + +D  IL   +   ++I
Sbjct: 575 ERVEQARN--FANKIWN-ASRFALMNLEGVTSADIDITGDLSTADRWILHRLNETSRDI 630



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D++ R  R+ G D L+  G D  G     K+ +  +  G+T        
Sbjct: 60  HIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREK 119

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                     +++D     +  M   LD S + F  T ++      R ++ K+  KG IY
Sbjct: 120 FLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERF--TLDEGLSQAVREVFVKLYKKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G     +        +D EV YK  +G  Y+ Q+
Sbjct: 178 RGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQY 212


>gi|119953049|ref|YP_945258.1| leucyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782485|sp|A1QZ46|SYL_BORT9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119861820|gb|AAX17588.1| leucyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 842

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 3/178 (1%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G      
Sbjct: 33  KEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPMGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F++    L  +Y  D  IRT ++ ++   + ++ K+  KG  
Sbjct: 93  AIQTGEHPKKITEKNIEKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y      WY        +++EV +  DG       + VQ      +  +++ Y ++L+
Sbjct: 153 YIKEMPVWYCPDLGTVLSNEEVIQTPDGPRSERGFHKVQRKPLRQWVLKITEYAERLI 210


>gi|229505444|ref|ZP_04394954.1| leucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510886|ref|ZP_04400365.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229512951|ref|ZP_04402417.1| leucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229518007|ref|ZP_04407451.1| leucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608463|ref|YP_002879111.1| leucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|229344722|gb|EEO09696.1| leucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229349844|gb|EEO14798.1| leucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350851|gb|EEO15792.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357667|gb|EEO22584.1| leucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371118|gb|ACQ61541.1| leucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
          Length = 878

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 52  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 111

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 112 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 165

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 166 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 218


>gi|229529949|ref|ZP_04419339.1| leucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333723|gb|EEN99209.1| leucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 878

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 52  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 111

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 112 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 165

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 166 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 218


>gi|85373086|ref|YP_457148.1| valyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84786169|gb|ABC62351.1| valyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 778

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 38/234 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ D       K +P DL + G DIL F    W A ++ A    
Sbjct: 486 VLDTWFSSALWPFATLGWPDE-TALLEKHYPNDLLISGFDILFF----WDARMMMAGYYN 540

Query: 285 ----PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P PK ++ HG +    G K+SKS GNV+DP+ +I++ G DALR+F+    + G+D 
Sbjct: 541 TGLKPWPK-LYLHGLVRAADGAKMSKSKGNVVDPLGLIDQYGADALRFFMAAMESQGRDI 599

Query: 340 FYDKDGLK-------KRVNAD---LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             D+  ++       K  NA     +NGIG   +             I  P A   +++ 
Sbjct: 600 KMDQSRVEGYRNFATKLWNATRFCQSNGIGASTT-------------IKAPPARLAANQW 646

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           I+    +V +EI + M +     A   +         D Y +  KP   +K +P
Sbjct: 647 IIGEVQQVCEEIEQAMADLRFDAAANAIYQFTWSRFCDWYLELIKPMFAEKPSP 700



 Score = 40.0 bits (92), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 11/62 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + D++ R+ RL G D L+  GTD           +AG+ T++ V++   + 
Sbjct: 52  HIGHALDNTLQDIVIRYERLRGKDSLWVVGTD-----------HAGIATQMVVERQLEDK 100

Query: 81  RD 82
           +D
Sbjct: 101 QD 102


>gi|229523252|ref|ZP_04412659.1| leucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339615|gb|EEO04630.1| leucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 878

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 52  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 111

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 112 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 165

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 166 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 218


>gi|299823062|ref|ZP_07054948.1| leucine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816591|gb|EFI83829.1| leucine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 803

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 13/195 (6%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y      YP+ A  H+GH       D+L+R  R+ G DVL   G D  G    + A 
Sbjct: 31  KKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGFDVLHPIGWDAFGLPAEQYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + G    +F ++N   F+     L  SYD    I TT+  ++   + +++K+ +KG  Y+
Sbjct: 91  DTGNDPAIFTEKNIATFKRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYEKGLAYE 150

Query: 122 GCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSY 179
              +  W         N++ +   ++   +     P+ QWM       +++AY D+LL  
Sbjct: 151 AEVAVNWCPALGTVLANEEVIDGKSERGGFPVYRKPMRQWM------LKITAYADRLLDD 204

Query: 180 YE--SHPEFILPIER 192
            E    PE I  ++R
Sbjct: 205 LELVDWPENIKDMQR 219



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 11/114 (9%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+  T      D +K + W P D+++ G +    H +Y   W  FL
Sbjct: 490 PQWAGSSWY--FLRYIDPTNQEAIADKAKLEHWLPVDVYIGGAEHAVLHLLYARFWHKFL 547

Query: 280 LSANLPLPK----KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +   K    K+F+ G IL    EK+SKS GNV++P +V+ + G D LR +
Sbjct: 548 YDIGVVPTKEPFQKLFNQGMILGGNNEKMSKSRGNVVNPDDVVAKYGADTLRLY 601


>gi|319407437|emb|CBI81088.1| Valyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 907

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 23/271 (8%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPA----- 277
           Q ++  W  +     +T G+   PD +     F+P  L V G DI+ F    W A     
Sbjct: 476 QDVLDTWFSSALWPFSTLGW---PDKTIELTTFYPTSLSVTGFDIIFF----WVARMMMM 528

Query: 278 -FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P P  V+ H  +  + G K+SKS GN++DP+E+I++ G DALR+ L    A 
Sbjct: 529 GMHFMGEVPFPT-VYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMAAQ 587

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   D   ++   N      + N  +R   M     D            +  IL+  S
Sbjct: 588 GRDVKLDPSRVEGYRN--FVTKLWN-ATRFAKMNGVRRDVAFKPEKTKLAINRWILTELS 644

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + +  + + ++N   + A   +   V  +  D Y +  KP   + +N D        T  
Sbjct: 645 KTVLAVTKGIENYKFNDAAHALYRFVWNALCDWYLELLKP-VFQGSNEDSKKEAQACTAW 703

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENR 484
           V+ ++  LL  F+P +  +++ +  + D  R
Sbjct: 704 VLDEVYKLLHPFMPHVTEELWSLTAMQDMKR 734



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D++ RF R+ G +VL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNTTIQDIMVRFQRMQGKNVLWQPGMD-----------HAGIATQMVVERQLAE- 99

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           R      ++  + FI    K  H+   ++  ++   G
Sbjct: 100 RQEPTRQEMGREKFIERVWKWRHEAGGMITNQLKRLG 136


>gi|116515200|ref|YP_802829.1| LeuS [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|122285404|sp|Q057G3|SYL_BUCCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116257054|gb|ABJ90736.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 847

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++K Y    + YP+ + H+GH     I+DV++RFHR+ G +VL   G D  G    + 
Sbjct: 31  KEKKKFYCLPMLPYPSGKLHMGHVRNYTISDVISRFHRMLGKNVLQPIGWDSFGLPAEET 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A    ++ K +  +N +  +     L  SYD
Sbjct: 91  AIKNNISPKKWTFKNIKTMKKQLQSLGFSYD 121


>gi|288958149|ref|YP_003448490.1| valyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910457|dbj|BAI71946.1| valyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 884

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +    +++P D+ V G DI+ F    W A ++   L
Sbjct: 454 VLDTWFSSALWPFSTLGW---PDQTPELDRYYPTDVLVTGFDIIFF----WVARMMMMGL 506

Query: 285 PLPK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              K      V+ H  +   KG+K+SKS GNVIDP+E+I++ G DALR+ L    A G+D
Sbjct: 507 HFMKDVPFRTVYIHALVRDEKGQKMSKSKGNVIDPLEIIDQYGTDALRFTLSAMAAQGRD 566



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    I DVL R++R+ G D L+  GTD           +AG+ T++ V++N
Sbjct: 52 HMGHALTFTIQDVLTRYNRMRGRDALWQPGTD-----------HAGIATQMVVERN 96


>gi|229525566|ref|ZP_04414971.1| leucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339147|gb|EEO04164.1| leucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 878

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 52  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 111

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 112 KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 165

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 166 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 218


>gi|50732866|ref|XP_418801.1| PREDICTED: similar to KIAA0028 [Gallus gallus]
          Length = 911

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ VL   G D  G     A
Sbjct: 86  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDTVARFQKMRGMQVLNPMGWDAFGLPAENA 145

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R+  D L +S+  +  I T    ++   + L+ K+ + G +
Sbjct: 146 AIEHGLHPASWTQSNIQHMREQFDALGLSFTWEREITTCLPEYYKWTQYLFLKLFESGMV 205

Query: 120 YK 121
           Y+
Sbjct: 206 YQ 207



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/225 (20%), Positives = 99/225 (44%), Gaps = 43/225 (19%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP E+++E G+D +R +++      +D  +D          D   G+  
Sbjct: 646 EKMSKSKHNGIDPEELMKEYGIDTIRLYILFAAPPEQDILWD-------TKTDAMPGVQR 698

Query: 361 LVSRSVSMILKDYDG----MIPTPGAFTESDES----ILSVCSRVLQEIRENM-QNQLIH 411
             +R  +++ K  +      +P P   ++  ++    I    + V+ E+ E   ++ L +
Sbjct: 699 WQTRLWTLVTKLIEARTSETMPNPEVLSKKQKAEARRIWEQKNLVISEVTEYFTKDHLFN 758

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKL 469
            A+++++SL + +      Q  W L          VL+     + +  L I++    P +
Sbjct: 759 AAISRLMSLSNVLH-----QASWPL----------VLHSAEYEDALATLCIMVAPMAPHI 803

Query: 470 ANKIFDILFVADENRCFQ---SLDQRLKPGFMLHKTFDPIFPRFL 511
           A++++  L   +   C     S D       +LH+++  + P +L
Sbjct: 804 ASEMWKGLAHIENKLCTHHNWSAD-------VLHQSWPKVDPEYL 841


>gi|332178751|gb|AEE14440.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 918

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 27/206 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +         WPAD+++ G D  R  F +    +  +    
Sbjct: 523 IMDVWFDSGSSHACVLKQREELR------WPADMYLEGTDQHRGWFQSSLLTSTAVFGKA 576

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGFI+  +G K+SKS GNVI P+EVIE+ G D LR ++      G     D+
Sbjct: 577 PY-KSVLTHGFIVDEEGYKMSKSRGNVIAPLEVIEKSGADVLRIWVASSDYTGDVAISDR 635

Query: 344 ------DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSR 396
                 D  KK     L N I  ++S     +L D++     +P  + + D  I S  + 
Sbjct: 636 ILEQQSDTYKK-----LRNTIRYMLS-----LLNDFNPKDSISPDRWLDLDRYIYSEFND 685

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS 422
           ++QEI +   N   ++ L ++ S ++
Sbjct: 686 LIQEIDQYFYNYQFYKMLYKIKSFMT 711


>gi|257063884|ref|YP_003143556.1| valyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791537|gb|ACV22207.1| valyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 889

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 67/361 (18%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQY-------------------- 226
           +R  +  +     LKD  +SR+ + WG +IP    D+  +                    
Sbjct: 386 DRWTQTYTTWMENLKDWCISRQLW-WGHRIPVFYCDECGWEDALMEDVDTCPKCGGHVHQ 444

Query: 227 ---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
              ++  W  +      T G+ DN D  +    P  + V  +DI+      W A ++ ++
Sbjct: 445 DEDVLDTWFSSQLWTFATQGWPDNLDELEGHH-PTKVLVTARDIIAL----WVARMVMSS 499

Query: 284 L----PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L     +P + VF +  IL K G ++SKS GN +DP+++I   G DA+RY L+  +   +
Sbjct: 500 LYFTGQIPFEDVFIYATILAKDGSRMSKSKGNGVDPMDLINMYGADAMRYNLLTLVTGSQ 559

Query: 338 DGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESI 390
           D  +D D       L      D A G    +  +   ++ + DG  P  P A T +D  I
Sbjct: 560 DVKFDADIDPKTHELLGSPRTDAARGFVTKIWNASRFVMMNLDGYTPGEPVAATAADAWI 619

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---S 445
            S  +++ + I + ++         ++         D Y +  K   L+    +RA    
Sbjct: 620 FSRLAKLTKSITDGIEAYEFGDVSRELYDFFWNEFCDWYIEMTKD-RLRGEGEERAVAQR 678

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            ++YV    +R    LL   +P +   I++ L VA+            +P  M+ +  DP
Sbjct: 679 NLVYVLDTALR----LLHPVMPFVTEAIWEHLPVAEG-----------QPALMVAQWPDP 723

Query: 506 I 506
           +
Sbjct: 724 V 724


>gi|120602905|ref|YP_967305.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231603|sp|A1VEL2|SYL_DESVV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120563134|gb|ABM28878.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 829

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 10/196 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N  N R     L  SYD    + T    ++   ++ + +  +KG +Y
Sbjct: 89  IKNGTHPAKWTFANIDNMRSQLKRLGYSYDWQREVATCTPEYYRWEQLFFLRFLEKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           +   +  +  +      +++V +G   +  +A    V+  E   +F R++ Y ++LL+  
Sbjct: 149 RKKAAQNWCPKCHTVLANEQVIEGLCWRCDSA----VEQKELTQWFLRITDYAEELLADL 204

Query: 179 --YYESHPEFILPIER 192
                  PE +L ++R
Sbjct: 205 SKLENGWPERVLSMQR 220



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 10/103 (9%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKIS 304
           ++W P D ++ G +    H +Y   F         +  + P    + + G +L  G K+S
Sbjct: 525 RYWLPVDQYIGGVEHAILHLLYSRFFTKALRDCGFIELDEPF-ANLLTQGMVLMDGSKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GNV+DP E+I   G D +R F +      +D  + + G++
Sbjct: 584 KSKGNVVDPTEMIARYGADTVRLFCLFAAPPERDFDWSESGIE 626


>gi|290579895|ref|YP_003484287.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996794|dbj|BAH87395.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 882

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRR 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           P  + V  HG I   +G K+SKSLGN IDP++V+++ G DALR+FL    A G+D
Sbjct: 503 PF-QNVLIHGLIRDEQGRKMSKSLGNGIDPMDVVDKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|307110820|gb|EFN59055.1| hypothetical protein CHLNCDRAFT_55974 [Chlorella variabilis]
          Length = 873

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D++AR+ R+ G +VL   G D  G    + A
Sbjct: 34  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIMARYKRMRGFNVLHPMGWDAFGLPAEQYA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G    V  D+N   FR     L  SYD    + T + R++   + ++ ++ ++G  Y
Sbjct: 94  IQTGTHPAVTTDKNIARFRQQLQSLGFSYDWRREVSTCDPRYYRWTQWIFLQLFNQGLAY 153

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ +    DG      H PV  M  + +  R++AY D+LL
Sbjct: 154 QAEVPVNWCPALGTVLANEEVI----DGVSERGGH-PVVRMPMKQWMLRITAYGDRLL 206



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 36/182 (19%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           + H+  K+SKS GNV++P +V+ + G D+LR + +          +   G++        
Sbjct: 640 VSHRAHKMSKSRGNVVNPDDVVWQYGADSLRLYEMFMGPLRDTKVWSTKGVE-------- 691

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            G+   ++R   ++ +      P   A    D+  L +  + ++++ E  +    +  LA
Sbjct: 692 -GVHRFLARVYRLVTEQ-----PLSDAPPSQDQ--LRLLHQTIKKVTEETEEMRFNTGLA 743

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++  V+   +       WE +   P  A          +    +LL  + P LA +++ 
Sbjct: 744 AMMEFVNGAYK-------WEAR---PKAA----------LEPFLLLLAPYAPHLAEEMWS 783

Query: 476 IL 477
           +L
Sbjct: 784 VL 785


>gi|261822387|ref|YP_003260493.1| leucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606400|gb|ACX88886.1| leucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 860

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|251772727|gb|EES53289.1| isoleucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 948

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIY 274
           G K  +  + I+ VW D+  ++      L    G+K   WPADL++ G D  R  FH+  
Sbjct: 533 GSKAVEKEKDILDVWFDSGVSH---EAVLKKRAGAK---WPADLYLEGSDQHRGWFHSSL 586

Query: 275 WPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             A  L    P  + V +HGF++  +G K++K+LGNVI P E+ ++ G D LR +
Sbjct: 587 LTAMALEGTPPY-RSVLTHGFVVDGQGRKMAKTLGNVISPKEITDKYGADVLRLW 640


>gi|189346135|ref|YP_001942664.1| leucyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|229559914|sp|B3EH05|SYL_CHLL2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189340282|gb|ACD89685.1| leucyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 805

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+    H+GH      +D++ARF R  G +VL   G D  G    + 
Sbjct: 29  EKPKYYVLDMFPYPSGSGLHVGHLEGYTASDIIARFKRSRGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K+  + N R+FR+    +  SYD    I TT+  +    + ++ ++ + G  
Sbjct: 89  AIKTGTHPKITTENNIRSFRETLQAMGFSYDWSKEINTTDPAYFKWTQWIFLRLYEMGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++   K ADG  Y     P+ QW+       +++AY ++LL
Sbjct: 149 YMSDVDVNWCEELKTVLANEEVDEKIADG--YTVVRKPLRQWV------LKITAYAERLL 200

Query: 178 S 178
           +
Sbjct: 201 A 201



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 27/197 (13%)

Query: 242 TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFS 292
           +G L +P+  + K+W   DL++ G +    H +Y   W   L   N+     P  +K+F+
Sbjct: 509 SGRLIDPE--REKYWMNVDLYIGGAEHAVLHLLYARFWHKVLFDLNVVSTVEPF-RKLFN 565

Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G IL +  EK+SKS GNVI    V++  G DA+R +         + F       K  N
Sbjct: 566 QGMILGEDNEKMSKSRGNVIPADHVLKTYGADAVRLY---------EMFLGPLEQVKPWN 616

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQL 409
            +   GI   + +   ++  + +G        T+    E +L    + ++++ E+ +   
Sbjct: 617 TNGIEGISRFLGKVWRLVYPEQEG---NKAELTDETMPEELLRRLHKTIRKVTEDTEALK 673

Query: 410 IHRALAQVISLVSEVDR 426
            + A+A+++ LV+E+ R
Sbjct: 674 FNTAIAEMMVLVNELQR 690


>gi|328956891|ref|YP_004374277.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673215|gb|AEB29261.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 816

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E  Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 40  EKENFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGFNVLHPMGWDAFGLPAEQY 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 100 ALDTGNDPAEFTAHNIETFRRQINSLGFSYDWEREINTTDPDYYKWTQWIFTKLYEKGLA 159

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+   +  W         N++ +    DG+     H PV     + +  +++ Y D+LL 
Sbjct: 160 YEAEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVYRKPMKQWMLKITVYADRLLD 214

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 215 DLELVDWPESIKDMQR 230



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 32/191 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILH-K 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 525 DPEKLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGN 584

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+E+ G D LR +      L   IA  ++G         RV   
Sbjct: 585 NEKMSKSKGNVVNPDDVVEKFGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRL 644

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + +  G +  R    I K  DG             S+  V  + ++++ E+ ++   + A
Sbjct: 645 IMDENGKVRDR----ITKFNDG-------------SLDVVYHQTVKKVTEDFEHLRFNTA 687

Query: 414 LAQVISLVSEV 424
           ++Q++  V+E 
Sbjct: 688 ISQMMVFVNEA 698


>gi|167771410|ref|ZP_02443463.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
 gi|167666050|gb|EDS10180.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
          Length = 945

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 43/277 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T+Y +     DNPD      WPADL++ G D  R  F +    +       
Sbjct: 547 IMDVWFDSGTSYASVIH--DNPDLK----WPADLYLEGTDQYRGWFQSSLLTSVAWKGVA 600

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HG+++  +G K+SKSLGN ++P E+ ++ G D LR ++           Y  
Sbjct: 601 PY-KTVCTHGWVVDGEGRKMSKSLGNGMEPSEITDQYGADILRLWVA-------SADYHA 652

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCS 395
           D    R++ D+   +  +   +  +   IL +  G  P   A      T  D   L+  +
Sbjct: 653 D---IRISKDILKQLSEVYRKIRNTARYILGNIAGFTPDKDAVAFDRLTGLDRWALTRFN 709

Query: 396 RVLQEIRE---NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-----ASTV 447
            +++ + E     +  +I+ AL    + +   + Y D  K   L    PD      A + 
Sbjct: 710 ELVKTVTEAYDRFEFHIIYHALHNFCT-IDMSNFYLDVIKD-RLYVEAPDSEDRRAAQST 767

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +Y    ++R + +L    +P  A +I+   F+ D++R
Sbjct: 768 IYT---ILRGMTLLFAPIIPFTAEEIWS--FMPDDSR 799



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 25/150 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKV-- 71
           Y NA  H+G A   ++ D++ R   L G    +T G D HG  I  KA +  GV++ +  
Sbjct: 72  YANANIHLGTALNKVLKDIIVRQKNLSGFKAPYTPGWDTHGLPIELKALKEIGVSSDIAP 131

Query: 72  -------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                        FV+     F+ +  + D  Y+    T +  +      ++  +++KG 
Sbjct: 132 IELRRVCHDFALRFVENQKEQFKRLGTIAD--YEHPYLTLKPEYEARQVEIFGAMANKGY 189

Query: 119 IYKG------CYSGWYSLRD-EAYYNDDEV 141
           IYKG      C +   +L + E  YN+D+ 
Sbjct: 190 IYKGLKPVYWCPTCETALAEAEIEYNEDKC 219


>gi|145345247|ref|XP_001417128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577355|gb|ABO95421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 949

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 33/268 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++            S+   +PAD+++ G D  R  F +        +   P
Sbjct: 519 MDVWFDSGSSWAGVVQ-------SRGLSFPADMYLEGSDQHRGWFQSSLLTGVASTGQAP 571

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             KK+ +HGF+L  KG K+SKSLGNVIDP  VIE           G D LR ++      
Sbjct: 572 Y-KKILTHGFVLDEKGYKMSKSLGNVIDPRTVIEGGKNQKTEPGYGADTLRLWVASTDYT 630

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESIL 391
           G D     + +K+   A         +  ++  ++   D   PT G   ES    ++ IL
Sbjct: 631 G-DVSIGMNIIKQTSEAY------RKLRGTIRFLMGVLDDFKPTEGVAYESLPAFEKYIL 683

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR-YFDAQK-PWELKKTNPDRASTVLY 449
           S     +QEI  + ++    R +A + S  + +   Y D  K    + + N  +      
Sbjct: 684 SRLDATMQEIETSYKSHEYSRVVAAITSFTTFLSNVYLDVSKDKLYIGEQNDIKRRACQT 743

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V   ++ +L   +    P +A + F  L
Sbjct: 744 VVSAIVERLIAAIAPLTPHMAEEAFQAL 771


>gi|166368993|ref|YP_001661266.1| valyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166091366|dbj|BAG06074.1| valyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 906

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 147/333 (44%), Gaps = 39/333 (11%)

Query: 184 PEFILPIERRNEVIS---FVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNY 238
           P + +  E  NE+ +   FV +  +  +L++   ++G  I I  DP  ++  W  +    
Sbjct: 416 PAWYIISETNNEITNHTPFVVAQDETSALAKAKQEYGEDIIIQQDPD-VLDTWFSSGLWP 474

Query: 239 LTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHG 294
            +T G+   P+ +     ++P    V G DI+ F    +   A   +  +P  K V+ HG
Sbjct: 475 FSTMGW---PEKTLDLDTYYPTTTLVTGFDIIFFWVARMTMMAGYFTGQMPF-KDVYIHG 530

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GFYDKDGLKKR 349
            +    G+K+SKS  N IDP+ +I++ G DALRY L+RE+A  G+D    +  K    + 
Sbjct: 531 LVRDENGKKMSKSANNGIDPLILIDKYGTDALRYTLIREVAGAGQDISLQYNRKTDESES 590

Query: 350 VNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDESILSVCSRVLQ 399
           V A  + AN I N  SR V M L+       TP    E        +D  ILS   + +Q
Sbjct: 591 VEAARNFANKIWN-ASRFVMMNLEG-----KTPEELGEPVLENLELADRWILSRYHQTVQ 644

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + R+ ++N  +  A   +   +     D Y +  K    K       +T       ++  
Sbjct: 645 KTRDYLENYGMGEAAKGLYEFIWRDFCDWYIELVKTRLWKDKESVSCATARQTLAFILAG 704

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              LL  F+P +  +I+  L    EN+   +L+
Sbjct: 705 TLKLLHPFMPHITEEIWHHL--TQENQQVLALE 735


>gi|148377404|ref|YP_001256280.1| valyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291450|emb|CAL58835.1| Valyl tRNA synthetase (Valine tRNA ligase)(VALRS) [Mycoplasma
           agalactiae PG2]
          Length = 829

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 26/242 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +  + +S  +     +R  + ++     + D +
Sbjct: 343 YSERSNAPVETLVMPQWFVKMDTLAKNVTEHLKSDDQVKFYPKRFIKTVNNWLKNIHDWT 402

Query: 209 LSRKTFDWGIKIP---DDPQYIMYV------WI---DALTNYLTTT----GYLDNP--DG 250
           +SR+ + WG +IP    D +  + V      W+   D L  + ++      +L  P  D 
Sbjct: 403 ISRQLW-WGHRIPAWYKDNEIKVQVDSPGEGWVQDSDVLDTWFSSGIAPFSFLGWPASDE 461

Query: 251 SKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSL 307
              +++P  L V G DI+ F  +  Y+     +   P  + V  HG +   +  K+SKSL
Sbjct: 462 LLKRYYPTSLLVTGYDIIFFWVVRMYFFGLEFTGKKPF-ETVLLHGLVRDEQNRKMSKSL 520

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP ++IEE G DALR+FLV     G D  +  +  K RV   L N + N ++R + 
Sbjct: 521 NNGVDPSKIIEEYGSDALRFFLVTNSTPGLDTRFSLE--KVRVAWGLCNKLWN-IARYID 577

Query: 368 MI 369
           M+
Sbjct: 578 ML 579



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA +  I D + RF +L+G D  +  G D  G
Sbjct: 51 HIGHALDQHIQDTILRFKKLEGYDTFYIAGMDHAG 85


>gi|46579607|ref|YP_010415.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|60390718|sp|Q72CT7|SYL_DESVH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46449022|gb|AAS95674.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233411|gb|ADP86265.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 829

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 10/196 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N  N R     L  SYD    + T    ++   ++ + +  +KG +Y
Sbjct: 89  IKNGTHPAKWTFANIDNMRSQLKRLGYSYDWQREVATCTPEYYRWEQLFFLRFLEKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           +   +  +  +      +++V +G   +  +A    V+  E   +F R++ Y ++LL+  
Sbjct: 149 RKKAAQNWCPKCHTVLANEQVIEGLCWRCDSA----VEQKELTQWFLRITDYAEELLADL 204

Query: 179 --YYESHPEFILPIER 192
                  PE +L ++R
Sbjct: 205 SKLENGWPERVLSMQR 220



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 10/103 (9%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKIS 304
           ++W P D ++ G +    H +Y   F         +  + P    + + G +L  G K+S
Sbjct: 525 RYWLPVDQYIGGVEHAILHLLYSRFFTKALRDCGFIELDEPF-ANLLTQGMVLMDGSKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GNV+DP E+I   G D +R F +      +D  + + G++
Sbjct: 584 KSKGNVVDPTEMIARYGADTVRLFCLFAAPPERDFDWSESGIE 626


>gi|304310516|ref|YP_003810114.1| Leucyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301796249|emb|CBL44457.1| Leucyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 815

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++ F R+ G  VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVMSHFQRMQGKSVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    R     L  SYD    + T   +++   +  + K+ +KG +YK
Sbjct: 92  KNNVAPAKWTYENIDYMRKQLKRLGFSYDWSRELATCNPKYYRWEQWFFTKLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY ++LL+   
Sbjct: 152 KSSMVNWDPVDQTVLANEQV---VDGKGWRSGAT-VERREIPQWFLKITAYAEELLTDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEGWPEQVKTMQR 221



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 27/212 (12%)

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH +     L  ++ P   ++ + G +L  G K+SKS GN +DP  +I++ G D +R F 
Sbjct: 544 FHKLMRDQGLTQSHEPF-TRLLTQGMVLKDGAKMSKSKGNTVDPQALIDQYGADTVRLFT 602

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTES 386
           +      +   +   G++         G    + R   ++        P      A T +
Sbjct: 603 MFAAPPEQSLEWSDSGVE---------GASKFLRRLWRLVHAKALAGRPAALDTSALTSN 653

Query: 387 DESILSVCSRVLQEIRENMQNQLIHR-ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           ++ +       LQ++ ++   +  +  A+A V+ L++ V R+ D         T+P   +
Sbjct: 654 EQDLRRKTHETLQKVYDDFARRFTYNTAIAAVMELLNAVSRFED---------TSPQSGA 704

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V     E +  + I+L    P + + ++  L
Sbjct: 705 IVH----EALESIVIMLAPITPHICHTLWQHL 732


>gi|283457922|ref|YP_003362525.1| valyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133940|dbj|BAI64705.1| valyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 910

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 15/260 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           DP  ++  W  +       TG+  NPD   AK +P DL   G DI+R    +    A  L
Sbjct: 521 DPD-VLDTWATSSLTPQIATGWGVNPD-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           ++++P      S   +    +K+SKS GNV+ P EV+E+ G DA+RY+       G D  
Sbjct: 579 ASSVPWYNTALSGWILDPDRKKMSKSKGNVVVPNEVLEKYGSDAVRYWAA-SARLGADTA 637

Query: 341 YDKDGLK--KRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           YD+  +K  +R+   L N    + NL +   S+I     G +         D S+L+  +
Sbjct: 638 YDEGQMKIGRRLAIKLLNASKFVLNLGATEKSVITSQAQGRV----LINALDRSLLARLA 693

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++E     +     RAL    S   S  D + +  K         +  ++VL      
Sbjct: 694 YLIEEATAAFEKYEYARALQICESFFWSFTDDFVELIKDRAYGARGEEEQASVLAALATT 753

Query: 455 IRQLAILLQAFVPKLANKIF 474
           +  L  L   F+P +  +I+
Sbjct: 754 LDALLRLFAPFLPFVTEEIW 773



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REQVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMTGKNVFYPLGWDDNGLPTERRV 106

Query: 63  QN-AGVTTKVFVDQNSRNFRDM 83
           QN  GV     V  N  +FRD+
Sbjct: 107 QNYYGVLCDPSVADND-SFRDL 127


>gi|168485679|ref|ZP_02710187.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571212|gb|EDT91740.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 883

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 15/189 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPNTETTDFKRYYPNSTLVTGYDIIPFWVSRMIFQGIEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        ++ D    + T  A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVVHDNVTKVATGEAGNVTDRWILHNLN 618

Query: 396 RVLQEIREN 404
             + ++ EN
Sbjct: 619 ETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|85058781|ref|YP_454483.1| leucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738978|sp|Q2NUU7|SYL_SODGM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|84779301|dbj|BAE74078.1| leucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 860

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 21/200 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR--------ILWKKISD 115
                   +   N    ++   +L   YD        R   TCR          + ++ +
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYD------WSREVTTCRPDYYRWEQWFFTRLYE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +YK   +  +  +D+    +++V    DG  +      V+  E   +F +++AY D+
Sbjct: 146 KGLVYKKTSAVNWCPQDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFVKITAYADQ 201

Query: 176 L---LSYYESHPEFILPIER 192
           L   L   ES PE +  ++R
Sbjct: 202 LLYDLDKLESWPEQVKTMQR 221


>gi|153827452|ref|ZP_01980119.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149738629|gb|EDM52982.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 405

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|24380137|ref|NP_722092.1| valyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81450887|sp|Q8DSL1|SYV_STRMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24378137|gb|AAN59398.1|AE015005_4 putative valyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 883

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 + V  HG I   +G K+SKSLGN IDP++V+++ G DALR+FL    A G+D
Sbjct: 499 TGCRPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVVDKYGADALRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G      A  A V
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLPDIIIRQKRMQGFDTLWLPGMDHAG-----IATQAKV 94

Query: 68  TTKVFVDQNSR 78
             ++  D  SR
Sbjct: 95  EARLAEDGISR 105


>gi|210622352|ref|ZP_03293121.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
 gi|210154340|gb|EEA85346.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
          Length = 1039

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 132/271 (48%), Gaps = 29/271 (10%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  +    P  K V  +  +L K G+K+SKS GN 
Sbjct: 546 QLFPADYICEGIDQTRGWFYSLLAISTFVMGKAPY-KNVLVNDLVLDKDGKKMSKSRGNT 604

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P E+ ++ G DALR++L+          +D++GLK+ V +     + N+   +   + 
Sbjct: 605 VNPFELFDKYGADALRWYLLYVSPPWTPIRFDEEGLKE-VQSKFVGTMKNVY--NFFTLY 661

Query: 371 KDYDGMIPTPGAF-------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
            + D +   PG F       +E D  ILS  + +  EI EN++   +++ + ++   ++ 
Sbjct: 662 ANTDNI--NPGDFFVEYKDRSELDRWILSKFNNLKAEIEENLEIFEVNKTIRRIQEFIND 719

Query: 423 EVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF----- 474
           ++  ++     ++ WE + T   +A  V   T E++ +L  ++  F P L+ +++     
Sbjct: 720 DLSNWYIRRSRRRFWEPELTEDKKA--VYNTTYELLTELCRVVAPFAPYLSEEMYRNLTG 777

Query: 475 -DILFVADENRCFQS-LDQRLKPGFMLHKTF 503
            + + +A   RC +  LD++L+    L K  
Sbjct: 778 EESVHLASYPRCNKELLDEKLEEKMDLVKNL 808


>gi|218295051|ref|ZP_03495887.1| isoleucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244254|gb|EED10779.1| isoleucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 1047

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 7/186 (3%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+      +  Y    +    + +PAD    G D  R  F++++    +L  +
Sbjct: 513 YVIDVWYDSGAMPFASIHYPFENEAEFREAFPADFIAEGIDQTRGWFNSLHQLGVMLFGS 572

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +   K V  HG IL  KG+K+SKS GNV+DP ++I E G DALR+++        D  + 
Sbjct: 573 IAF-KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYISAPPEADRRFG 631

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
            + +++ V  D    + N+ S  V+    D   +   P P    E D  +L+    ++Q 
Sbjct: 632 PNLVRETVR-DYFLTLWNVYSFFVTYANLDRPNLKSPPPPKERPELDRWLLARMQDLIQR 690

Query: 401 IRENMQ 406
           + E ++
Sbjct: 691 VTEALE 696


>gi|57235042|ref|YP_180942.1| leucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123732479|sp|Q3ZA07|SYL_DEHE1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57225490|gb|AAW40547.1| leucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 813

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 39/246 (15%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+ GY   P D  K ++W P DL+  G +    H  Y   F        ++    P  KK
Sbjct: 509 TSPGYDKGPFDPEKLRYWMPVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPF-KK 567

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L+      + G ++  GL   
Sbjct: 568 LFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYLMFVGPWDQGGEWNDSGL--- 624

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQ 408
                 +G+   ++R  ++  ++Y     TP  A  E++  +     + +++I  +++  
Sbjct: 625 ------SGMSRWLNRVWNLFTEEY-----TPQTASAEAERELKRTLHQTIKKITMDIERL 673

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  +A ++ L + + ++ +A             A+         ++  A++L    P 
Sbjct: 674 RFNTVVAALMELSNSLAKFKEA-------------AAVSAESWQNSLKTFALMLAPVAPH 720

Query: 469 LANKIF 474
           +A +++
Sbjct: 721 IAEELW 726



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 6/175 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL+G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLNGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHHIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                 +    +A   +++V    DG  +  +  P    + E +FFR++ Y D+L
Sbjct: 152 AKAPVNWCPSCQAVLANEQV---VDGTCWRCE-TPTTRRDLEQWFFRITNYADEL 202


>gi|76800799|ref|YP_325807.1| valyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|90101535|sp|Q3IUE5|SYV_NATPD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76556664|emb|CAI48235.1| valine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 872

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 20/201 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           +M  W+D+  + L   G+ D        F P  L   G DI+R  A Y    L +A    
Sbjct: 453 VMDTWMDSSISPLYVAGWPDE------TFEPVQLREQGHDIIRTWAFY--TILRTAAVTD 504

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
            +P  + + +       G K+SKS GN + P EV+EE   DA R  +      G D  F 
Sbjct: 505 EIPWEEALINGMVFGDDGNKMSKSRGNFVQPEEVVEEHSADAFRQAMALGGQPGSDIQFQ 564

Query: 342 DKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            K+     R    L N I    S  +     D    I  P A+ ++DE IL+ C+RV  E
Sbjct: 565 WKEVTSASRFQTKLWN-ITKFASEHIDESTPD----IEAP-AYRDADEWILARCARVADE 618

Query: 401 IRENMQNQLIHRALAQVISLV 421
           + ++M       AL  V   V
Sbjct: 619 VADDMDEYRFDSALRTVREFV 639



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 28/54 (51%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +ER    I T   YP    HIG+A      D  AR+HRL G DVLF  G D HG
Sbjct: 33 EERPDYIIDTPPPYPTGNLHIGNALGWCYMDYAARYHRLQGDDVLFPQGWDCHG 86


>gi|89098946|ref|ZP_01171826.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086350|gb|EAR65471.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 880

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ D  +    +++P    V G DI+ F    + +     +   
Sbjct: 448 VLDTWFSSALWPFSTMGWPDEENPDFKRYYPTASLVTGYDIIFFWVSRMIFQGLEFTGER 507

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +   +G K+SKSLGN +DP++VI + G D+LRYFL    + G+D  +  
Sbjct: 508 PF-KDVLIHGLVRDEQGRKMSKSLGNGVDPMDVIAQYGADSLRYFLSTGSSPGQDLRFSM 566

Query: 344 DGLKKRVNADLANGIGN 360
           + ++   N   AN I N
Sbjct: 567 EKVEATWN--FANKIWN 581



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 18/110 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN   + H+GHA++  + D+L R  R+ G DVL+  G D           +AG+
Sbjct: 43  TIVIPPPNVTGRLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMD-----------HAGI 91

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK---RHHDTCRILWKKIS 114
            T+  V+Q  ++  +     D+  + F++ T K    + D  R  W K+ 
Sbjct: 92  ATQAKVEQKLKS--EGKSRYDLGREAFVQETWKWKEEYADHIRQQWSKLG 139


>gi|77408959|ref|ZP_00785681.1| leucyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172422|gb|EAO75569.1| leucyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|61657413|emb|CAI44328.1| leucyl-tRNA synthetase [Thermotoga sp. RQ7]
          Length = 839

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 45  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 105 IEKGIHPEEWTRKNISIIRKQVKRLGISYDWNREIATCDEEYYKWTQWIFLQLYKNGLAY 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+  
Sbjct: 165 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIKHLEQWFFKITDYAERLLNDL 220

Query: 181 E---SHPEFILPIER 192
           E     PE +  ++R
Sbjct: 221 EKLTGWPEHVKTMQR 235



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 22/192 (11%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P ++IE+ G D LR +++      KD  +   G++  
Sbjct: 583 LFTQGMIYKDGAKMSKSKGNVVSPDDMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 642

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            R    L N    ++       +   +G+  T     E    + S+  ++ ++I    + 
Sbjct: 643 HRFIRRLWNTFYTILPHVKEETV---EGLSLTTPVEKELRRKLHSIIKKITEDIEGGFK- 698

Query: 408 QLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A++ ++ L++ +++Y     +  W  K            +  E+   L ++L  F
Sbjct: 699 --FNTAISGLMELINHLNQYLSGVPEDQWNRK------------LLREIAENLTLVLSPF 744

Query: 466 VPKLANKIFDIL 477
            P LA + +  L
Sbjct: 745 APHLAEEFWHEL 756


>gi|319746032|gb|EFV98311.1| leucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|259502818|ref|ZP_05745720.1| leucine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169185|gb|EEW53680.1| leucine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 845

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 67  KDQKKFYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 126

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 127 YALKTGHNPKNFTNKNIDHFRDQIQALGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGL 186

Query: 119 IYK 121
            Y+
Sbjct: 187 AYE 189



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 561 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 620

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D++GL         +G    + R 
Sbjct: 621 SKGNVVNPDDIVDKYGADTLRLYEMFMGPLTESVPWDEEGL---------HGSYKWIQRV 671

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      F  +D  +  V ++ ++++ E++     + A++Q++  V+E 
Sbjct: 672 WRLLMDDNNHLRDRVSNF--NDGKLTKVYNQTVKKVTEDLGRMHFNTAISQLMVFVNEA 728


>gi|251773415|gb|EES53964.1| valyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 889

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 135/328 (41%), Gaps = 68/328 (20%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              DDP                ++  W  + 
Sbjct: 409 IRDWCVSRQIW-WGHRIPAWSCSDCGHLAVLRDDPSVCPACQSPNITRDPDVLDTWFSSA 467

Query: 236 TNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK----- 289
                T G+ +  PD   A+F+P  L V G DIL     +W A ++   L L  +     
Sbjct: 468 LWPFATLGWPEETPD--LARFYPTSLLVTGFDIL----FFWVARMIMMGLYLTDRIPFRD 521

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           V+ H  +  + G+K++KS GNV+DP+E+++  G DA R  L    + G+D          
Sbjct: 522 VYIHALVRDEFGQKMTKSRGNVVDPLELMDRFGTDAFRLSLALLASPGRD---------I 572

Query: 349 RVNADLANGIGNLVS------RSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEI 401
           R++ +      N VS      R +S ++      +  PG     ++  ILS   R  +E 
Sbjct: 573 RLSVERVEAARNFVSKLWNAFRFISRVVPRETPFLSRPGEVRGMANRWILSELVRTEREY 632

Query: 402 RENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           R+ M++  +  A   V      +  D Y +A K       + D A  + + T+  +R + 
Sbjct: 633 RDAMESYRVDEAALLVYRFTWSLFCDWYLEAAK----VDVDRDSADPLRHETLSTLRTVG 688

Query: 460 I----LLQAFVPKLANKIFDILFVADEN 483
                L   F+P +  ++  I   ++ +
Sbjct: 689 AALLDLAHPFLPFVTEELSRIFVFSNAS 716



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 6/57 (10%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           S  I  PN   + H+GHA  + I DV+AR+HR+ G DVL+  G D  G     AAQN
Sbjct: 49  SMVIPPPNITGRLHMGHALNLTIQDVMARYHRMAGDDVLWIPGVDHAG----IAAQN 101


>gi|269792312|ref|YP_003317216.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099947|gb|ACZ18934.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 829

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 44/258 (17%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-K 288
           T+    D P D     +W P D ++ G +    H IY   F        LL  +L  P  
Sbjct: 511 TSPSSKDAPFDFDDVSYWMPVDQYIGGIEHACLHLIYARFFTKVCSDLGLLPKDLREPFT 570

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + + G ++  G K+SKS GNV+DP E+I   G D  R F++      KD  +   G++ 
Sbjct: 571 NLLTQGMVIKDGSKMSKSKGNVVDPDEIIRRYGADTARLFILFAAPPEKDLDWSDKGVE- 629

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                   G    +SR   ++ ++ +G++  P     S   + S+  + L++++      
Sbjct: 630 --------GAHRFLSRVFRLVEENLEGLMSAP-----SPMDVDSIGDKALRDVKRQ---- 672

Query: 409 LIHRALAQVISLVSEVDRYFD---------AQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            IHR + +V   +S+ +R F+               LK ++P+  S    V  E +  L 
Sbjct: 673 -IHRTIDKVTRDISK-ERQFNTAVASLMELCNSLQSLKPSSPEGWS----VLREGVESLV 726

Query: 460 ILLQAFVPKLANKIFDIL 477
           + L  F P +  +++ +L
Sbjct: 727 LCLAPFTPHVCEELWSML 744



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 10/196 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I D++ARF R++G +VL+  G D  G     AA
Sbjct: 29  DKPKFYCLEMFPYPSGALHMGHLRNYSIGDLMARFLRMNGYNVLYPMGFDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N  +       +  SYD    + T    ++   + L+ +   KG  Y
Sbjct: 89  LKFGVQPAEWTWKNIEHMTGQLKKMGCSYDWRRRVETCNPDYYRWTQWLFLQFFKKGLAY 148

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W         N+  V    DG +       V     E +F R++ Y  +LL  
Sbjct: 149 RKEAPVNWCESCKTVLANEQVV----DGGHCWRCGTAVTKRNLEQWFLRITDYAQELLDC 204

Query: 180 ---YESHPEFILPIER 192
               E  PE +  ++R
Sbjct: 205 LDSLEGWPERVRMMQR 220


>gi|34495960|ref|NP_900175.1| leucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|48428526|sp|Q7P0R1|SYL_CHRVO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34101814|gb|AAQ58182.1| leucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 872

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  +   YP+ + H+GH     I DVLARF RL G +VL   G D  G     AA 
Sbjct: 32  RPKYYALSMFPYPSGKLHMGHVRNYTITDVLARFKRLQGFNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     +   N    +   D L  + D    + T +  ++   + L+ ++ +KG IYK
Sbjct: 92  KNGGAPAAWTYANIEYMKTQLDSLGFALDWERELATCKPDYYRWEQWLFTRLFEKGVIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
                 +   D+    +++V    DG+ + +    V+  E   Y+FR++ Y ++LL+   
Sbjct: 152 KNGVVNWDPVDQTVLANEQV---VDGRGWRS-GALVEKREIPMYYFRITDYAEQLLADLD 207

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 208 KLDGWPEQVKTMQR 221


>gi|306828157|ref|ZP_07461420.1| leucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429694|gb|EFM32740.1| leucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|262190523|ref|ZP_06048767.1| leucyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262033596|gb|EEY52090.1| leucyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 858

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|146340820|ref|YP_001205868.1| valyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193626|emb|CAL77643.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Bradyrhizobium sp.
           ORS278]
          Length = 985

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 39/268 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D+    K +++P ++ V G DI+     +W A ++   +  
Sbjct: 526 VLDTWFSSALWPFSTLGWPDDTPEVK-RYYPTNVLVTGFDII----FFWVARMMMMGIHF 580

Query: 287 PKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338
            K+V     + H  +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D  
Sbjct: 581 MKEVPFSTVYIHALVRDEKGAKMSKSKGNVIDPLALIDEHGADALRFTLAAMAAQGRDIK 640

Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTES-DESILS 392
                 +G +K      AN + N  SR   M    + + +D     P +  E+ +  I  
Sbjct: 641 LSTQRVEGYRK-----FANKLWN-ASRFAEMNGCTVTEGFD-----PASAKETLNRWIAH 689

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---V 447
             +   +E+ E ++    + A   +   V +V  D Y +  KP  L    P +  T   V
Sbjct: 690 EAAAATREVTEALEAYRFNDAANAIYRFVWDVYCDWYVELSKPTLLGDEGPAKDETKAMV 749

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +   E+++    LL  F+P +   +++
Sbjct: 750 AWARDEILK----LLHPFMPFITEALWE 773



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA    + D+L RF R+ G DVL+  GTD           +AG+ T++ V++ 
Sbjct: 83  HMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGIATQMVVERQ 127


>gi|310659347|ref|YP_003937068.1| leucyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826125|emb|CBH22163.1| leucyl-tRNA synthetase [Clostridium sticklandii]
          Length = 800

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 27/188 (14%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+ Q  H+GH       DV+AR  RLDG +VL+  G D  G      
Sbjct: 30  DKEKFYPLVEFPYPSGQGLHVGHPRSYTALDVVARRRRLDGYNVLYPIGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K+    N  NF+     L IS+D    I TT++ ++   + ++ ++ +KG  
Sbjct: 90  AIKNKIHPKIVTKDNIANFKRQLMSLGISFDWSREINTTDEGYYKWTQWIFIQLFNKGLA 149

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKG----ADGQYYNAQHNPVQWMEEEGYFFRL 169
           YK       C S    L +E      EV +G      G+    + N  QWM       ++
Sbjct: 150 YKNKMPINWCNSCKVGLANE------EVIQGTCERCGGEVVRKEKN--QWM------LKI 195

Query: 170 SAYQDKLL 177
           + Y D+L+
Sbjct: 196 TEYADRLI 203



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 26/179 (14%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFIL-HKGEKISK 305
           +W P D +  G +    H +Y   W   L    +   P P  K  SHG IL    EK+SK
Sbjct: 523 YWMPVDWYNGGMEHTTLHLLYSRFWHKVLYDIGVVTNPEPYAKRTSHGMILGENNEKMSK 582

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P E++EE G D  R + +      K   +   G+K         G    + R+
Sbjct: 583 SRGNVVNPDEIVEEYGADTFRMYEMFIGDFEKSVPWSSLGIK---------GCRRFIERT 633

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +       MI     F++  ES L    + ++++ E+ +    + A+A ++SL++E+
Sbjct: 634 WKL-----QEMIREEDIFSDKIESSL---HKTIKKVTEDYETLKFNTAIAAMMSLINEI 684


>gi|307317033|ref|ZP_07596474.1| valyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897121|gb|EFN27866.1| valyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 947

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----------KVFSHGFILHK-GE 301
           K++  D+ V G DI+ F    W A ++   L   K            V+ H  +  K G+
Sbjct: 535 KYYQTDVLVTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQ 590

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +    N      + N 
Sbjct: 591 KMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRN--FGTKLWNA 648

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
              +        +G IP   + T  +  IL+  SR ++++ E +++   + A   +   V
Sbjct: 649 TRFAEMNGAISSEGFIPEAASLT-INRWILTELSRTIRDVSEAIEDYRFNEAAGALYRFV 707

Query: 422 SE--VDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP +        R S     T  V+ ++  LL  F+P +  ++++
Sbjct: 708 WNQFCDWYLELLKPVFNGDDEAAKRESQA--CTAYVLDEIYKLLHPFMPFMTEELWE 762



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNNTLQDIMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQLME- 99

Query: 81  RDMADVLDISYDDFI 95
           R +    D+  + FI
Sbjct: 100 RQLPSRRDMGREAFI 114


>gi|94989658|ref|YP_597758.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|123382456|sp|Q1JIV9|SYL_STRPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94543166|gb|ABF33214.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|324994299|gb|EGC26213.1| leucine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 203 LLNDLEELDWPESIKDMQR 221


>gi|262168630|ref|ZP_06036325.1| leucyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|189083213|sp|A5F2X0|SYL_VIBC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|262022748|gb|EEY41454.1| leucyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 858

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|218897179|ref|YP_002445590.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218541652|gb|ACK94046.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 1033

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++++ G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +        ++ +LV EV  ++      + WE    N ++A+   Y T+ EV+ 
Sbjct: 689 VRTALDDYQFTNVAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHEVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|76788163|ref|YP_330587.1| leucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77406149|ref|ZP_00783221.1| leucyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|123744499|sp|Q3JYR6|SYL_STRA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76563220|gb|ABA45804.1| leucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77175229|gb|EAO78026.1| leucyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|318060128|ref|ZP_07978851.1| valyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318076386|ref|ZP_07983718.1| valyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 841

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 7/177 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  D S AKF+P    V G DIL F       F L A    
Sbjct: 421 VLDTWFSSGLWPFSTLGWPEQTD-SVAKFYPNSTLVTGYDILFFWVARMMMFGLYAMDGT 479

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P   ++  HG +    G+K+SKS GN +DP++ +++ G DALR+ L R    G D    +
Sbjct: 480 PPFSEIVLHGMVRDQNGKKMSKSFGNAVDPLDWMDKYGSDALRFTLARGANPGVDVPIGE 539

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           + ++   N    N + N  +R   M     +G +P     + +D  ILS    V  +
Sbjct: 540 EWVQGSRN--FTNKLWN-ATRFALMNGATVEGALPPAERLSATDRWILSRLGEVTAQ 593


>gi|153213841|ref|ZP_01949047.1| leucyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124115675|gb|EAY34495.1| leucyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 858

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|222099493|ref|YP_002534061.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571883|gb|ACM22695.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 839

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 45  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 105 IEKGIHPEEWTRKNISIIRKQVKRLGISYDWNREIATCDEEYYKWTQWIFLQLYKNGLAY 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+  
Sbjct: 165 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIKHLEQWFFKITDYAERLLNDL 220

Query: 181 E---SHPEFILPIER 192
           E     PE +  ++R
Sbjct: 221 EKLTGWPEHVKTMQR 235



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P ++IE+ G D LR +++      KD  +   G++  
Sbjct: 583 LFTQGMIYKDGAKMSKSKGNVVSPDDMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 642

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            R    L N    ++       +   +G+  T     E    + S+  ++ ++I    + 
Sbjct: 643 HRFIRRLWNTFYTILPHVKEETV---EGLSLTTPVEKELRRKLHSIIKKITEDIEGGFK- 698

Query: 408 QLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A++ ++ L++ +++Y     +  W  K            +  E+   L ++L  F
Sbjct: 699 --FNTAISGLMELINHLNQYLSGVPEDQWNRK------------LLREIAENLTLVLSPF 744

Query: 466 VPKLANKIF 474
            P LA + +
Sbjct: 745 APHLAEEFW 753


>gi|189083247|sp|A1R6X5|SYL_ARTAT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 842

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 52  RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGFDVLHPIGWDSFGLPAENAAI 111

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA  +  T   +D  + +F+  A  +   +   + T++  ++   + L+K+  ++G  
Sbjct: 112 KRNAHPSEWTYANIDTQAASFKRYA--ISADWSRRLHTSDPEYYRWTQWLFKRFYERGLA 169

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           Y+      +  +D     +++V  GA          PV       ++F+++ Y D+LL  
Sbjct: 170 YRKDSPVNWCPKDLTVLANEQVVNGA----CERCGTPVTKKSLNQWYFKITDYADRLLED 225

Query: 179 --YYESH-PEFILPIER 192
               + H PE +L ++R
Sbjct: 226 MDQLQGHWPERVLAMQR 242



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 41/247 (16%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D  K   W P   +V G +    H +Y   F        L+ AN P    + + 
Sbjct: 540 YTEGPFDPEKINNWMPVGQYVGGVEHAILHLLYARFFTKVIKDIGLIEANEPF-SALLNQ 598

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +L+ G+ +SKSLGN +D  E +++ GVDA+R  +V       D  +          AD
Sbjct: 599 GQVLNGGKAMSKSLGNGVDLGEQLDKFGVDAVRLTMVFASPPEDDVDW----------AD 648

Query: 354 LA-NGIGNLVSRS--VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           ++ +G    ++R+  +   +    G+ P  G     D ++ +V  + + +  E + N   
Sbjct: 649 VSPSGSAKFLARAWRLGQDVSSEPGVDPATG-----DRALRTVTHKTIADAAELLDNNKF 703

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +  +A+++ LV+   +  D+             A        E +  +A++L  F P  A
Sbjct: 704 NVVVARLMELVNATRKTIDSG------------AGAADPAVREAVEAVAVILSLFAPYTA 751

Query: 471 NKIFDIL 477
             +++ L
Sbjct: 752 EDLWNTL 758


>gi|153820000|ref|ZP_01972667.1| leucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509451|gb|EAZ72045.1| leucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 408

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|71902811|ref|YP_279614.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123761452|sp|Q48VJ7|SYL_STRPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71801906|gb|AAX71259.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|15965269|ref|NP_385622.1| valyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307309292|ref|ZP_07588960.1| valyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|81634651|sp|Q92Q37|SYV_RHIME RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15074449|emb|CAC46095.1| Probable valyl-tRNA synthetase (valine--tRNA ligase) [Sinorhizobium
           meliloti 1021]
 gi|306900293|gb|EFN30910.1| valyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 947

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----------KVFSHGFILHK-GE 301
           K++  D+ V G DI+ F    W A ++   L   K            V+ H  +  K G+
Sbjct: 535 KYYQTDVLVTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQ 590

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +    N      + N 
Sbjct: 591 KMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRN--FGTKLWNA 648

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
              +        +G IP   + T  +  IL+  SR ++++ E +++   + A   +   V
Sbjct: 649 TRFAEMNGAISSEGFIPEAASLT-INRWILTELSRTIRDVSEAIEDYRFNEAAGALYRFV 707

Query: 422 SE--VDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP +        R S     T  V+ ++  LL  F+P +  ++++
Sbjct: 708 WNQFCDWYLELLKPVFNGDDEAAKRESQA--CTAYVLDEIYKLLHPFMPFMTEELWE 762



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNNTLQDIMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQLME- 99

Query: 81  RDMADVLDISYDDFI 95
           R +    D+  + FI
Sbjct: 100 RQLPSRRDMGREAFI 114


>gi|322392591|ref|ZP_08066051.1| leucine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144583|gb|EFX39984.1| leucine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLSDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 TDLDELDWPESIKDMQR 221


>gi|227327380|ref|ZP_03831404.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 860

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|222617646|gb|EEE53778.1| hypothetical protein OsJ_00171 [Oryza sativa Japonica Group]
          Length = 1257

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 408 KPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMQGFNVLHPMGWDAFGLPAEQYA 467

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+  ++N   FR     L  SY  D  I TTE  ++   + ++ ++  +G  Y
Sbjct: 468 IETGTHPKITTERNINRFRSQLKSLGFSYDWDREISTTEPTYYKWTQWIFLQLLKRGLAY 527

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ +    DG      H PV       +  R+++Y D+LL
Sbjct: 528 QAEVPVNWCPALGTVLANEEVI----DGVSERGGH-PVIRKPMRQWMLRITSYADRLL 580



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 33/177 (18%)

Query: 302  KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 1023 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 1073

Query: 362  VSRSVSMILKD--YDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
            + R+  +++     DG        T+ + ++  L V  + +  + E +Q    + A++ +
Sbjct: 1074 LGRTWRLVVGTPLPDGSYGVGTTVTDEEPTLDQLRVLHKCIARVTEEIQETRFNTAISAM 1133

Query: 418  ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  V       +A   W+   T P            VI    +LL  F P +A +++
Sbjct: 1134 MEFV-------NAAYKWD---TQPK----------SVIESFILLLSPFAPHMAEELW 1170


>gi|160934412|ref|ZP_02081799.1| hypothetical protein CLOLEP_03285 [Clostridium leptum DSM 753]
 gi|156867085|gb|EDO60457.1| hypothetical protein CLOLEP_03285 [Clostridium leptum DSM 753]
          Length = 795

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 52/246 (21%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLPK---KVFSHGFIL-HKGEKIS 304
           ++W P D +  G +    H +Y   W  FL    + P P+   K  SHG IL   GEK+S
Sbjct: 515 EYWTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIKVVPTPEPYAKRTSHGMILGENGEKMS 574

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P ++++E G D +R F +      K   +   G++         G    V R
Sbjct: 575 KSRGNVVNPDDIVKEYGADTMRLFEMFIGDFEKAAPWSAAGIR---------GCRRFVER 625

Query: 365 SVSM---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             ++   ++KD        G    S E+      + ++++ E+++N   + A+A ++SL+
Sbjct: 626 YWNLQDILVKD--------GGIRASLETPF---HKTIKKVGEDIENLKFNTAIAALMSLI 674

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++   +D+                   +T E ++   ILL  F P +  +++ +  + +
Sbjct: 675 NDI---YDSGS-----------------ITPEELKVFTILLNPFAPHVTEEVWSLNMLGE 714

Query: 482 ENRCFQ 487
           E  C Q
Sbjct: 715 EMVCQQ 720



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 3/145 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D++AR  RL G +VL+  G D  G      
Sbjct: 22  DKPKYYTLIEFPYPSGQGLHVGHPRSYTALDIVARKRRLMGYNVLYPIGWDAFGLPTENF 81

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V  +V   +N   F+     L IS+D    I TT+  ++   + ++ ++   G  
Sbjct: 82  AIKNHVHPEVVTKKNIARFKQQLQSLGISFDWSREINTTDPSYYKWTQWIFLQLFKHGLA 141

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG 144
           YK   S  +    +    ++EV  G
Sbjct: 142 YKKEASVNWCTSCKCVLANEEVVNG 166


>gi|139473022|ref|YP_001127737.1| leucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166231648|sp|A2RCB2|SYL_STRPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134271268|emb|CAM29484.1| leucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 833

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|19745338|ref|NP_606474.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|32171569|sp|Q8P2T2|SYL_STRP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19747441|gb|AAL96973.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 833

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|296417262|ref|XP_002838277.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634205|emb|CAZ82468.1| unnamed protein product [Tuber melanosporum]
          Length = 838

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 11/168 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH     I+DVLARF R+ G  V+   G D  G     AA   GV+ K + +
Sbjct: 4   YPSGVLHMGHLRVYTISDVLARFQRMRGKRVIHPMGWDAFGLPAENAAIEGGVSAKKWTE 63

Query: 75  QNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           +N  + ++   ++++ +  D  IRT    ++   + L+ K+ + G  Y+      +   D
Sbjct: 64  KNIDSMKEQFSLMNVGFDWDREIRTCSPDYYVHTQRLFLKLYEHGLAYRKESQVNWDPVD 123

Query: 133 EAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           E    +++V          A   +    QW      FF+++AY+  LL
Sbjct: 124 ETVLANEQVLDNGKSWRSGAVVERRTLPQW------FFKITAYKKALL 165


>gi|295399580|ref|ZP_06809562.1| leucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109865|ref|YP_003988181.1| leucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294979046|gb|EFG54642.1| leucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214966|gb|ADP73570.1| leucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 805

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N   FR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTEKNINTFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +   ++   +     P+ QWM       R++AY D+LL
Sbjct: 149 YIDEVPVNWCPALGTVLANEEVINGRSERGGHPVIRKPMRQWM------LRITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPESIKEMQR 219



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 19/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P ++IE  G D LR + +          +   GL         +G  
Sbjct: 574 NEKMSKSRGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGAR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   + + +   + P      E+D ++  V  + ++++ E+ +    + A++Q++ 
Sbjct: 625 RFLERVWRLFVDENGELNPKIVDNPETD-TLERVYHQTVKKVTEDYEALRFNTAISQLMV 683

Query: 420 LVSEV 424
            ++E 
Sbjct: 684 FINEA 688


>gi|218961403|ref|YP_001741178.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730060|emb|CAO80972.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 827

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+   HIGH     I DV++R   ++G +V+   G D  G      A 
Sbjct: 30  KPKYYVLSMFPYPSGVLHIGHISNYSIGDVISRLKMMEGYNVMQPIGYDAFGMPAENFAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                 ++  ++N    R   D +   +D    I T    ++   + L+KK+ +KG +Y 
Sbjct: 90  EHNSHPRLTTEENIAAMRIQFDSMGFGFDWSREISTCRPEYYRWGQYLFKKLYEKGLVYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  +  W         N+  V    DG  +    N V+  E E ++F+++ Y ++LL + 
Sbjct: 150 KKGFQNWCEQCQTVLANEQVV----DGHCWRC-GNIVEQKELEQWYFKITEYAEELLDFS 204

Query: 181 E--SHPEFILPIER 192
           +    PE ++ +++
Sbjct: 205 QVIDWPERVITMQK 218



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKIS 304
           A +W P D ++ G +    H +Y   F      L   N   P  ++ + G +   G K+S
Sbjct: 522 ADYWLPVDQYIGGIEHACMHLLYARFFHKFMRDLGWVNCDEPFARLLTQGMVTKDGAKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           KS GNV+DP  +I+  G D LR FL+      KD  +  DG+
Sbjct: 582 KSKGNVVDPQYIIDRFGADTLRTFLLFASPPEKDVEWSDDGI 623


>gi|145588420|ref|YP_001155017.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083136|sp|A4SVD9|SYL_POLSQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145046826|gb|ABP33453.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 890

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y  + + YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 36  KKKPKYYACSMLPYPSGKLHMGHVRNYTINDVMARQLRMQGYNVLMPMGWDAFGMPAENA 95

Query: 62  A-QNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A QN     K   D  +   + MA + L I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  AIQNKVPPAKWTYDNIAYMKKQMAAMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+      +   D+    +++V    DG+ + +    V+  E  GY+F ++AY ++LLS
Sbjct: 156 YRKTQVVNWDPIDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYFNITAYAEQLLS 210


>gi|94987780|ref|YP_595881.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991651|ref|YP_599750.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|161936127|ref|YP_281511.2| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|123080438|sp|Q1JNR2|SYL_STRPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123382351|sp|Q1JDV2|SYL_STRPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94541288|gb|ABF31337.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545159|gb|ABF35206.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 833

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|119964190|ref|YP_947987.1| leucyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119951049|gb|ABM09960.1| leucyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 865

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 75  RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGFDVLHPIGWDSFGLPAENAAI 134

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA  +  T   +D  + +F+  A  +   +   + T++  ++   + L+K+  ++G  
Sbjct: 135 KRNAHPSEWTYANIDTQAASFKRYA--ISADWSRRLHTSDPEYYRWTQWLFKRFYERGLA 192

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           Y+      +  +D     +++V  GA          PV       ++F+++ Y D+LL  
Sbjct: 193 YRKDSPVNWCPKDLTVLANEQVVNGA----CERCGTPVTKKSLNQWYFKITDYADRLLED 248

Query: 179 --YYESH-PEFILPIER 192
               + H PE +L ++R
Sbjct: 249 MDQLQGHWPERVLAMQR 265



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 41/247 (16%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D  K   W P   +V G +    H +Y   F        L+ AN P    + + 
Sbjct: 563 YTEGPFDPEKINNWMPVGQYVGGVEHAILHLLYARFFTKVIKDIGLIEANEPF-SALLNQ 621

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +L+ G+ +SKSLGN +D  E +++ GVDA+R  +V       D  +          AD
Sbjct: 622 GQVLNGGKAMSKSLGNGVDLGEQLDKFGVDAVRLTMVFASPPEDDVDW----------AD 671

Query: 354 LA-NGIGNLVSRS--VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           ++ +G    ++R+  +   +    G+ P  G     D ++ +V  + + +  E + N   
Sbjct: 672 VSPSGSAKFLARAWRLGQDVSSEPGVDPATG-----DRALRTVTHKTIADAAELLDNNKF 726

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +  +A+++ LV+   +  D+             A        E +  +A++L  F P  A
Sbjct: 727 NVVVARLMELVNATRKTIDSG------------AGAADPAVREAVEAVAVILSLFAPYTA 774

Query: 471 NKIFDIL 477
             +++ L
Sbjct: 775 EDLWNTL 781


>gi|50913539|ref|YP_059511.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|60390672|sp|Q5XE35|SYL_STRP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50902613|gb|AAT86328.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 833

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|22538192|ref|NP_689043.1| leucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25012050|ref|NP_736445.1| leucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76797851|ref|ZP_00780115.1| leucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77412992|ref|ZP_00789195.1| leucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|54039681|sp|P67515|SYL_STRA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042039|sp|P67514|SYL_STRA3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22535102|gb|AAN00916.1|AE014284_11 leucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413593|emb|CAD47671.1| leucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76586811|gb|EAO63305.1| leucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77161004|gb|EAO72112.1| leucyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 833

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|303244593|ref|ZP_07330926.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485019|gb|EFL47950.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 1056

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 25/231 (10%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           AD  V G D +   F++ +  + ++  ++P  KK   HGF L   G K+SKSLGNV++P 
Sbjct: 574 ADFIVEGNDQVTKWFYSQHALSEIVFNDIPY-KKCMMHGFALDENGNKMSKSLGNVVNPD 632

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDY 373
           +V+EE G D LRY+L+      +D  +    L +     L N + N  + +V+ M+L   
Sbjct: 633 DVVEEYGADLLRYYLLSANKAWEDIRFSYKELGEI--KSLFNTLWNSYAFAVNYMVL--- 687

Query: 374 DGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFD 429
           D  +P         + D+ I+S  + + +EI E+++   +H    ++   + +++ R++ 
Sbjct: 688 DNFVPNDEYMNYLKDEDKWIISKINSLTKEIIEDLEMPHLHSYTWKLREFILNDLSRWYI 747

Query: 430 A---QKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                + W ++K +P++ S   T+ YV +++I  LA       P ++ KI+
Sbjct: 748 KLIRSRTW-MEKDDPEKLSAYQTLYYVLMKLITILA----PVAPHISEKIY 793


>gi|78044545|ref|YP_359254.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123729620|sp|Q3AF30|SYL_CARHZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77996660|gb|ABB15559.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 821

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+ + H+GH     I DV+AR+ R+ G  VL   G D  G     AA
Sbjct: 31  EKPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARYKRMRGYAVLHPMGWDAFGLPAENAA 90

Query: 63  -QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
            ++  V    +   N  N R     L ISYD    I T    ++   + L+ +   KG  
Sbjct: 91  IKHGNVHPADWTWDNIANMRRQLKELGISYDWRREIATCHPEYYRWTQWLFLQFYKKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      +    +    +++V    DG+     H+ V+  E E +FF+++AY ++LL 
Sbjct: 151 YKKKAPVNWCPGCQTVLANEQV---IDGECERC-HSRVEKKELEQWFFKITAYAERLLQ 205



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 106/233 (45%), Gaps = 33/233 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           ++ P D ++ G +    H +Y   F        L+  + P    + + G +L  G K+SK
Sbjct: 528 RWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGLVHVDEPF-TNLLTQGMVLKDGAKMSK 586

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P E++E+ G D  R F++      +D  +   G++         G    ++R 
Sbjct: 587 SKGNVVSPEEIVEKYGADTARLFILFAAPPERDLEWSDQGVE---------GSFRFLNRV 637

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
             +I +  D +      F+  D+ +  +    ++++ E+++ +   + A++ ++ LV+ +
Sbjct: 638 WRLIYQTKDRISDELREFSAKDKELNRLLHATIKKVTEDIEERFNFNTAISAIMELVNGL 697

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +Y + +        NP        +  E + +L ILL  F P +A ++++ L
Sbjct: 698 YQYKEGE-------INPG-------LLKEALNKLVILLAPFAPHIAEELWEAL 736


>gi|255744739|ref|ZP_05418690.1| leucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161127|ref|ZP_06030238.1| leucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|14285779|sp|Q9KTE6|SYL_VIBCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|255737770|gb|EET93164.1| leucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262028877|gb|EEY47530.1| leucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|327483681|gb|AEA78088.1| Leucyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 858

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
                   +  +N    ++   +L   YD        R   TCR          + K+  
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYD------WNREFATCRPEYYRWEQEFFTKLFA 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   S  +   D+    +++V    DG  +     PV+  E   +F +++AY
Sbjct: 146 KGLVYKKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAY 198


>gi|258545483|ref|ZP_05705717.1| valine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519183|gb|EEV88042.1| valine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 935

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 117/298 (39%), Gaps = 61/298 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +      T G+ D+    +  F+P ++ V G DI+ F     +    + +   
Sbjct: 461 VLDTWFSSALWPFATQGWPDDTADLR-DFYPGNVLVTGFDIIFFWVARMVLMGLYCMDGA 519

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV---------------------- 320
           +P  K+V+ HG +   +G+K+SKS GNV+DP+++I+ +                      
Sbjct: 520 VPF-KEVYIHGLVRDSEGQKMSKSKGNVLDPLDIIDGIDLENLVAKRTSGMMQPQKAAKI 578

Query: 321 ---------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVS 363
                          G DALR+    +   G+D  +D     KRV    +  N + N   
Sbjct: 579 EAQTRKEFPDGIAAHGTDALRFTFAAQATMGRDVVFD----LKRVEGYRNFCNKLWN--- 631

Query: 364 RSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            +   +L   DG   T   F E   +D  I     R    +RE         A   V   
Sbjct: 632 -AARFVLMQTDGQTITAAPFAEKSAADRWIYGALDRTTAAVREAFATYRFDFAAQAVYEF 690

Query: 421 V--SEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +     D Y +  KP  L K NPD A  +   +  ++V+ Q   L+   +P ++ +I+
Sbjct: 691 LWNQYCDWYLELVKP-VLAKNNPDEAEKARTRHTLLDVLEQTLRLIHPLMPFISEEIW 747


>gi|295838904|ref|ZP_06825837.1| valine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695457|gb|EDY42390.1| valine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 873

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 7/174 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P    V G DIL F  +    F L A    
Sbjct: 453 VLDTWFSSALWPFSTLGWPERTE-SVAKFYPNSTLVTGYDILFFWVVRMMMFGLYAMDGT 511

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P   ++  HG +    G+K+SKS GN +DP++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFSEIVLHGMVRDQNGKKMSKSFGNAVDPLDWMDKYGSDALRFTLARGANPGVDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           + ++   N    N + N  +R   M     +G +P     + +D  ILS    V
Sbjct: 572 EWVQGSRN--FTNKLWN-ATRFALMNGATVEGGLPPAERLSATDRWILSRLGEV 622


>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044256|sp|A4J2F4|SYI_DESRM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 931

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 7/105 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++L     L+ P+    +  PADL++ G D  R  F++    +  ++   P
Sbjct: 527 MDVWFDSGSSHLAV---LNQPELWPEQQRPADLYLEGSDQHRGWFNSSLSTSVAVTGKPP 583

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K V +HGF +  KG K+SKSLGNV+DP+++  ++G D LR ++
Sbjct: 584 Y-KTVLTHGFTVDEKGRKMSKSLGNVVDPLKICSQMGADILRLWV 627



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 28/61 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K  +     Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKTKFILHDGPPYANGHIHLGHTLNKVLKDIIVKYRSMSGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  A 62
           A
Sbjct: 105 A 105


>gi|322705718|gb|EFY97302.1| leucyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 961

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  Y+     YP+   H+GH     IAD +AR+HRL G DVL   G D  G     AA
Sbjct: 81  DRKTNYVLPMFPYPSGSLHLGHLRVYSIADTVARYHRLKGDDVLLPMGWDAFGLPAENAA 140

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   V+   N +  ++    ++ S+D    +   +   +   + L+  + ++G  Y
Sbjct: 141 LERGIDPGVWTRSNIKKMKEQLGSMNGSWDWSRELTACDPEFYKHTQKLFLMLRERGLAY 200

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      Y   D+    +++V   A+G  + +    V+  + + +FFR S Y++ LL
Sbjct: 201 QAEAEVNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRKLKQWFFRTSEYREALL 254


>gi|319790327|ref|YP_004151960.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114829|gb|ADU97319.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 917

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +++K Y      YP+ + H+GH     I DV+ARF RL G +VL   G D  G     
Sbjct: 26  VSDKKKFYCLEMFPYPSGKIHMGHVRNYSIGDVIARFKRLAGFNVLHPMGWDAFGLPAEN 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA  +GV  + +   N  N ++    L  SYD    + T    ++   + ++ K+ +KG 
Sbjct: 86  AAIKSGVHPREWTLSNIENMKEELKRLGFSYDWEREVTTCSPEYYRWNQWIFLKMLEKGI 145

Query: 119 IYKGCYS 125
            Y+   S
Sbjct: 146 AYRAKAS 152


>gi|313888048|ref|ZP_07821726.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846003|gb|EFR33386.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 1033

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 16/262 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+         Y  +N D     F PAD    G D  R  F+++   +  ++  
Sbjct: 515 VIDVWFDSGAMPFAQWHYPFENKDNFDELF-PADFICEGIDQTRGWFYSLIAISTYMTGK 573

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  +  IL K G+K+SKS GN + P E+ ++ G D +R++L+          +D
Sbjct: 574 SPY-KNVLVNDLILDKEGKKMSKSRGNTVAPFELFDKYGADVVRWYLLYVSPPWTPTKFD 632

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRV 397
           +DGL++ + +     + N  + +   +  + D + P     +     E D+ +LS   R+
Sbjct: 633 EDGLRE-IESKFFRSLRN--TYNFFSLYANTDKIDPREVKVSYDDLEEIDKWLLSKYHRL 689

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLY-VTVEVI 455
           ++ +RE+M+   + + + ++   V E V  ++  +      KT+ D     +Y  T EV+
Sbjct: 690 VKNVREDMEAFELTKVVREIQDFVIEDVSNWYIRRNRRRFWKTDKDNTKIAVYKTTYEVL 749

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  L+   VP L+ ++F  L
Sbjct: 750 LGVTKLIAPMVPFLSEELFKSL 771


>gi|312870174|ref|ZP_07730307.1| leucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094294|gb|EFQ52605.1| leucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 806

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKFYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPKSFTNKNIDHFRDQIQSLGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 522 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 581

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D++GL         +G    + R 
Sbjct: 582 SKGNVVNPDDIVDKYGADTLRLYEMFMGPLTESVPWDEEGL---------HGSYKWIQRV 632

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      F  +D  +  V ++ ++++ E+ +    + A++Q++  V+E 
Sbjct: 633 WRLLMDDNNHLRDRVSNF--NDGKLTKVYNQTVKKVTEDFERMHFNTAISQLMVFVNEA 689


>gi|262037397|ref|ZP_06010861.1| leucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748559|gb|EEY35934.1| leucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 894

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y+    AYP+ + H+GH     I D +AR+ ++ G ++L   G D  G     AA 
Sbjct: 33  KENYYVLEMFAYPSGKLHVGHLRNYAIGDAVARYKKMRGFNILHPFGWDSFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
           + G     +   N  N R    ++ +SY  D  I T    ++   ++ + ++  KG +Y 
Sbjct: 93  DNGAHPGKWTKANIDNMRRQMKLMGLSYDWDREISTYTPEYYKWNQLFFIEMYKKGLVYK 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y  W    +    N+    +  +G+ +      V   E   ++ +++ Y ++LL+ +
Sbjct: 153 KKSYVNWCPDCNTVLANE----QVENGKCWRHSKTDVIQKELSQWYLKITDYAEELLTGH 208

Query: 181 ES----HPEFILPIER 192
           E      PE +L +++
Sbjct: 209 EELRGHWPEQVLAMQK 224



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 12/185 (6%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++ K EK+SKS  N +DP E++++ GVD  R F +      K+  ++ +GL         
Sbjct: 633 LVTKVEKMSKSKNNGVDPEEIVKDYGVDPARVFTLFAAPPEKELEWNMNGLAGAYR--FI 690

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
           N +  LVS S     K+ +             E DE I     + ++++ E++++    +
Sbjct: 691 NRLYLLVSDSFEFADKNAEKENNYSIDLSKRNEKDEEIQKKLHQTIKKVTESIEDDFHFN 750

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A V+ L++++  Y    K   + K N    S  ++   EV+ ++ +L+  F P +A+
Sbjct: 751 TAIAAVMELLNDMTAY----KQEVIDKNNISSESKKIW--KEVLDKVILLISPFAPHIAD 804

Query: 472 KIFDI 476
           ++++I
Sbjct: 805 ELWEI 809


>gi|13508219|ref|NP_110168.1| valyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501066|sp|P75304|SYV_MYCPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1674039|gb|AAB96009.1| valyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 838

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 25/190 (13%)

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALT--- 236
           +PE I   +R N+ ++   S LK   +SR+   WG  IP         ++V   A T   
Sbjct: 378 YPELI--PKRFNKQVTRWLSQLKPWCISRQLI-WGHPIPVWTHKQSGALHVGSTAPTDKQ 434

Query: 237 NYLTTTGYLDN-----------PDGSKAK-FWPADLHVIGKDILRFHAI--YWPAFLLSA 282
           NY  +T  LD             D  K K F P DL V G DIL F  +   + ++  + 
Sbjct: 435 NYTQSTDVLDTWFSSSLWPLICLDWHKNKHFVPTDLLVTGYDILFFWVLRMTFNSYFQTK 494

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            LP  K+V  HG +   +  K+SKSL N I+P+++I + G DA R FL      G D  +
Sbjct: 495 QLPF-KQVLIHGLVRDAQNRKMSKSLNNGINPMDLIRDYGADATRLFLTSNHTPGDDLIF 553

Query: 342 DKDGLKKRVN 351
           ++  LK   N
Sbjct: 554 NEQKLKSAAN 563


>gi|327404343|ref|YP_004345181.1| valyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319851|gb|AEA44343.1| valyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 876

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 38/312 (12%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +Y + PE  +      E I   K+   + +LS       +K  +D   ++  W  +    
Sbjct: 416 FYGNGPEDFVVARTMEEAIELAKAKSGNNALSAAD----LKQDED---VLDTWFSSWLWP 468

Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVF 291
           ++    L  P   + K++ P +  V   +I+ F    W A ++ A       LP  K V+
Sbjct: 469 ISVFNGLTRPGNEEIKYYYPTNDLVTAPEIMFF----WVARMIIAGYEYMGELPF-KNVY 523

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
             G +  K G K+SKSLGN  DPIE+IE+ G D +R  ++     G D  +D    ++  
Sbjct: 524 YTGIVRDKLGRKMSKSLGNSPDPIELIEKYGADGVRLGMLLSSPAGNDLPFDSSQCEQGR 583

Query: 351 NADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           N    N I N      + ++K ++   I  P A  ++ E   +  ++ L+ I E M    
Sbjct: 584 N--FTNKIWN-----AARLVKGWEVKPIEQPKASIKAIEWFSARFNQELENINELMNKFK 636

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAF 465
           I  AL  +  LV      +D    W L+   P     +    L  T+    +L  L+Q F
Sbjct: 637 ISEALMAIYKLV------WDDFCAWYLEMIKPGYEQPIDQATLDQTIVFFEKLLCLVQPF 690

Query: 466 VPKLANKIFDIL 477
            P +A +++ +L
Sbjct: 691 TPFVAEELWHLL 702


>gi|315427220|dbj|BAJ48833.1| valyl tRNA-synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427259|dbj|BAJ48871.1| valyl tRNA-synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 775

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 17/150 (11%)

Query: 255 FWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
            +P  +   GK+I+R    Y     +LL+   P   KV+  G  L + GEK+SKS GNVI
Sbjct: 485 LYPVSIRPQGKEIVRTWLYYTVLRCYLLTGKRPF-NKVWISGLGLDEHGEKMSKSKGNVI 543

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+ ++E+ G D  R++  +E + G+D          R++      +G  +S+  +  L 
Sbjct: 544 DPMPILEKYGADCFRFWNAQEASLGEDF---------RISEARIASVGKFLSKLWN--LA 592

Query: 372 DYDGMIPTP--GAFTESDESILSVCSRVLQ 399
            Y  M P P     T +D  IL+  S+ ++
Sbjct: 593 KYVSMFPKPSRATLTPTDRWILAELSKTVE 622


>gi|253687581|ref|YP_003016771.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511548|sp|C6DBW8|SYL_PECCP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251754159|gb|ACT12235.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 860

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|225870967|ref|YP_002746914.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700371|emb|CAW94709.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 883

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 10/118 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFQRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-KKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +K FS    HG I   +G K+SKSLGN IDP++VIE+ G D+LR+FL    A G+D
Sbjct: 499 TGRKPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQD 556



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  AIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVTT----------KV--FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++           KV  + D+ +   ++    L +S  D+ R   T ++      R 
Sbjct: 100 EQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSL-DYARDRFTLDEGLSKAVRK 158

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ ++  KG IY+G +   W S    A  + + ++K  +G +Y+  +
Sbjct: 159 VFVELYKKGWIYRGEFIINWDSAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|297584302|ref|YP_003700082.1| valyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142759|gb|ADH99516.1| valyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 879

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 20/176 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +       +++P D  V G DI+ F    W A ++      
Sbjct: 447 VLDTWFSSALWPFSTMGWPNEEAEDFNRYYPTDALVTGYDIIYF----WVARMIFQGQHF 502

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD- 338
           +   P  K V  HG +   +G K+SKSLGN +DP++VI++ G DALR+FL      G D 
Sbjct: 503 TERRPF-KDVLIHGLVRDSEGRKMSKSLGNGVDPMDVIDKYGADALRFFLSTGSTPGNDL 561

Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILS 392
             F++    K   N +  N I N  SR   M + D     I   G  T +DE IL+
Sbjct: 562 RFFWE----KVEANWNFGNKIWN-ASRFALMNIGDMTYEEIDITGRKTIADEWILT 612



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+    +
Sbjct: 42  TIVIPPPNVTGKLHLGHAWDTTLQDILIRVKRMQGYDALWLPGMDHAGIATQAKVEGKLR 101

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      + F++Q+              +  M   LD S + F  T +    +  +
Sbjct: 102 EEGVSRHDLGREKFLEQSWAWKEEYAGFIRSQWAKMGLSLDYSKERF--TLDDGLSEAVK 159

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++ ++G IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 160 EVFVRLYEEGLIYRGEYIINWDPDTKTALSDIEVIYKDVQGAFYHMRY 207


>gi|301633478|gb|ADK87032.1| valine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 838

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 25/190 (13%)

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALT--- 236
           +PE I   +R N+ ++   S LK   +SR+   WG  IP         ++V   A T   
Sbjct: 378 YPELI--PKRFNKQVTRWLSQLKPWCISRQLI-WGHPIPVWTHKQSGALHVGSTAPTDKQ 434

Query: 237 NYLTTTGYLDN-----------PDGSKAK-FWPADLHVIGKDILRFHAI--YWPAFLLSA 282
           NY  +T  LD             D  K K F P DL V G DIL F  +   + ++  + 
Sbjct: 435 NYTQSTDVLDTWFSSSLWPLICLDWHKNKHFVPTDLLVTGYDILFFWVLRMTFNSYFQTK 494

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            LP  K+V  HG +   +  K+SKSL N I+P+++I + G DA R FL      G D  +
Sbjct: 495 QLPF-KQVLIHGLVRDAQNRKMSKSLNNGINPMDLIRDYGADATRLFLTSNHTPGDDLIF 553

Query: 342 DKDGLKKRVN 351
           ++  LK   N
Sbjct: 554 NEQKLKSAAN 563


>gi|312140349|ref|YP_004007685.1| valine-tRNA ligase vals [Rhodococcus equi 103S]
 gi|325677074|ref|ZP_08156743.1| valine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311889688|emb|CBH49005.1| valine-tRNA ligase ValS [Rhodococcus equi 103S]
 gi|325552059|gb|EGD21752.1| valine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 886

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 39/246 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL-------------SANLPLPKKVFSHGFILHK- 299
           KF+P  + V G DIL     +W A ++                +P  K +F HG +  + 
Sbjct: 481 KFYPTSVLVTGYDIL----FFWVARMMMFGTYVAGDDAVQGGKVPF-KDLFLHGLVRDQF 535

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   N   AN + 
Sbjct: 536 GKKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLAVGEDHAQSSRN--FANKLF 593

Query: 360 NLVSRSV--SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N    ++    ++ D    +P   A T++D  IL    +V  E+ E  +     +A   +
Sbjct: 594 NATKFALMNGAVVAD----LPARDALTDADRWILDRLEQVRGEVDEAFEKFEFSKACEAL 649

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLY------VTVEVIRQLAILLQAFVPKLAN 471
                     +D    W L+   P  A   +Y      V   V+  L  +L   +P +  
Sbjct: 650 YHFA------WDEVCDWYLELAKPQLAEGSVYADGTKAVLGNVLDTLLRMLHPVIPFVTE 703

Query: 472 KIFDIL 477
            ++ +L
Sbjct: 704 TLWKVL 709


>gi|257055270|ref|YP_003133102.1| valyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585142|gb|ACU96275.1| valyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 882

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 23/267 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    ++T G+ + P    AKF+P  +   G DIL F       F L  
Sbjct: 446 DPD-VLDTWFSSGLWPMSTLGWPE-PTDDLAKFYPTSVLSTGYDILFFWVARMMMFGLYG 503

Query: 283 ---NLP---LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              N P   +P + V+ HG I    G+K+SKS GNVIDP++ ++  G DA R+ L R   
Sbjct: 504 MRDNGPERSIPFEHVYLHGLIRDAHGKKMSKSRGNVIDPLDWMDRFGADATRFTLARGAN 563

Query: 335 CGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            G D    ++      N    L N     V+   ++        +P     TE+D  IL 
Sbjct: 564 PGADMALAEEWAAGSRNFCTKLWNATRFAVANGATVATS-----VPEADELTEADRWILG 618

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             S V  E+   +++    +A   +     +   D Y +  K  +L     D    VL  
Sbjct: 619 RLSAVASEVDSLLEDFQFAKATNLLYHFTWDELCDWYLELAKV-QLSGEKADSTRVVLGR 677

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++V+ +   LL  F+P +  +++  L
Sbjct: 678 VLDVVLR---LLHPFIPFITERLWTTL 701


>gi|328543659|ref|YP_004303768.1| Valyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
 gi|326413403|gb|ADZ70466.1| Valyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 945

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P  + + G DI+ F    W A ++  +L  
Sbjct: 512 VLDTWFSSALWPFSTLGWPDKTP-ELARYFPTSVLITGFDIIFF----WVARMMMMSLHF 566

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K      V+ H  +   KG+K+SKS GNVIDP+ ++EE G DALR+ L    A G+D
Sbjct: 567 MKTEPFETVYIHALVRDEKGQKMSKSKGNVIDPLSLVEEFGADALRFTLTAMAAQGRD 624



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + DVL RF R+ G DVL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNNTLQDVLVRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQLME- 99

Query: 81  RDMADVLDISYDDFIR 96
           R      D+  D F++
Sbjct: 100 RQEPGRRDMGRDAFVQ 115


>gi|217967811|ref|YP_002353317.1| isoleucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336910|gb|ACK42703.1| isoleucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 975

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 17/251 (6%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGE 301
            +N +  KA F PAD      D  R  F+++   + L+  N P  K V     +L  KGE
Sbjct: 531 FENQEEFKASF-PADFICEAIDQTRGWFYSLLAISTLV-FNEPAYKNVLVTELVLDEKGE 588

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SK  GNV+DP  ++ + G DALR+++           +  D + + +   L   + N 
Sbjct: 589 KMSKHKGNVVDPWIILNKYGADALRWYIFTVSPPWVPLRFAPDAVNEALKKFLLT-LWNT 647

Query: 362 VSRSVSMILKDYDGMIPTPG--AFTE----SDESILSVCSRVLQEIRENMQNQLIHRALA 415
           V  S   I  + DG  P      F E    SD+ I+S  + ++ +++ +M+N    +A  
Sbjct: 648 V--SFFSIYAEIDGFDPNSHFVPFNELEDHSDKWIISRLNSLIVKVKNDMENFNATQAAR 705

Query: 416 QVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKI 473
            + S V  ++  ++         K+  D+     Y VT  VI++L+ L+  F+P  A KI
Sbjct: 706 SIQSFVIDDLSNWYIRLNRERFWKSEKDKDKWTAYTVTYTVIKELSKLIAPFIPFTAEKI 765

Query: 474 F-DILFVADEN 483
           + +I+ VA++N
Sbjct: 766 YQEIVRVAEKN 776



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFVDQ 75
           N +PH GH    I  D+  R+  + G  V    G D HG  +  +  +  G+ +K  +++
Sbjct: 51  NGKPHAGHVLPRIYKDLFPRYKTMQGYYVPRKAGWDTHGLPVELEVEKELGLNSKQDIEK 110

Query: 76  ----------------NSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             R +R   + +   I  D+   T    + ++   L KKI +KG
Sbjct: 111 YGVEEFNKKCKESVFRYEREWRRFTERIGFWIDMDNPYITLSNDYIESVWWLIKKIWEKG 170

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     +  R E   +D EV +G
Sbjct: 171 LLYKGYKIVPWCPRCETALSDHEVAQG 197


>gi|307104320|gb|EFN52574.1| hypothetical protein CHLNCDRAFT_58789 [Chlorella variabilis]
          Length = 979

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/228 (20%), Positives = 102/228 (44%), Gaps = 6/228 (2%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA LL    P  + + +    ++ ++  K SKS G  +   +  
Sbjct: 417 VQFMGKDNVPFHTVIFPATLLGTRDPWTMMRSISVTEYLNYEDGKFSKSRGVGVFGNDAK 476

Query: 318 EE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           E  + V+  RY+L+       D  +  D    + NA+L + +GN ++R++      +D  
Sbjct: 477 ETGIPVEVWRYYLLALRPETSDSAFQWDDFATKNNAELNDNLGNFINRTLKFCWARFDKT 536

Query: 377 IPTPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +P   A     E++  +  +V   +++  + ++   +  AL   +      + +F   + 
Sbjct: 537 VPGASAGGAGMEAVRGLGEKVAALVEQYIQALEGLRMKEALKCAMLASKAGNAFFQETEI 596

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           W   K + +  ++ +     ++  LA LLQ F+P    K+   L  ++
Sbjct: 597 WVAYKQDKEACASYISACAGIVLLLAALLQPFMPSFTAKLLQQLGASE 644



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ ADV ARF R  G +V++  GTDE G      A
Sbjct: 209 QRNILITSALPYVNNVPHLGNIIGCVLSADVYARFCRARGYNVVYVCGTDEFGTATETKA 268

Query: 63  QNAGVTTKVFVDQ-----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
              G+T +   D+      +R    + +  DI +D F RT  +   +  + +++ +  +G
Sbjct: 269 LEEGLTCQQICDKYHAIHKARGGGSIYEWFDIGFDKFGRTPTRAQTEIGQSIFRTLEQRG 328


>gi|167464567|ref|ZP_02329656.1| isoleucyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 922

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G  +         WPADL++ G D  R  F++       +    
Sbjct: 524 IMDVWFDSGSSHAAVLGQRNELS------WPADLYLEGSDQYRGWFNSSLITGVAVKEEA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF L  +G K+SKS+GN IDP +V E++G D LR ++ 
Sbjct: 578 PY-KGVLSHGFTLDGEGRKMSKSIGNTIDPNQVCEKLGADILRLWVA 623



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 21/156 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  +     Y N   HIGHA   ++ D + RF  + G D  +  G D HG  I +A  
Sbjct: 47  KPKFILHDGPPYANGDIHIGHALNKLLKDFIIRFKTMQGYDAPYVPGWDTHGLPIEQAIA 106

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISY-----DDFIR------------TTEKRHHDT 105
           N+G   KV   Q S   FR+      + +     + FIR            T +  +   
Sbjct: 107 NSG---KVDRKQMSVPEFREYCKEYAMKWVEKQKEQFIRLGVRGDWEHPYITLQPEYEAE 163

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              L+ K+  KG IYKG    ++S   E+   + E+
Sbjct: 164 QIRLFGKMVRKGYIYKGLKPVYWSPSSESALAEAEI 199


>gi|33240397|ref|NP_875339.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|48428531|sp|Q7VBZ5|SYL_PROMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33237924|gb|AAP99991.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 870

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 88/178 (49%), Gaps = 5/178 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  Y  +   YP+   H+GH    +I DV+AR HR+ G  VL   G D  G     A
Sbjct: 43  KSQKTFYALSMFPYPSGTLHMGHVRNYVITDVIARLHRMKGDSVLHPMGWDAFGLPAENA 102

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   ++  +N  + R+  + L +S  +D  + T ++ ++   + ++ ++ + G  
Sbjct: 103 AIERGIPADIWTYKNIEDMRNQLNRLGLSIDWDKEVTTCKEEYYKWTQYIFLELYEAGLA 162

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+   +  +   D+    +++V   A+G+ + +    V+  + + +F +++ + D+LL
Sbjct: 163 YQKSATVNWDPIDKTVLANEQV--DANGRSWRSGA-LVEKKKLKQWFLKITDFADELL 217



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 24/179 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI++ G D  R F++ +    KD  +D+  ++ +      N +  
Sbjct: 625 EKMSKSKYNGVDPASVIDKYGTDTARMFILFKAPPEKDLEWDESDVEGQYR--FLNRLWR 682

Query: 361 LVSRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
           +V  S+    KD +    T        ++ +  ++ V +  ++E+  ++ N    + A++
Sbjct: 683 IVIYSIET--KDINISNCTQEILLNDLSDKERKLIKVLNNTIKEVTNDLVNDFQFNTAIS 740

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +++ L + +    D                   Y+  E  ++L +LL  F P +A + +
Sbjct: 741 ELMILCNSIYENID---------------DCGDYIVTETFKKLTLLLAPFAPHIAEEFW 784


>gi|227827596|ref|YP_002829376.1| valyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584800|ref|YP_002843302.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238619754|ref|YP_002914580.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|227459392|gb|ACP38078.1| valyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019850|gb|ACP55257.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238380824|gb|ACR41912.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 842

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLFLTKFYEDKNVFNKTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNIPF- 556

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             V  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +
Sbjct: 557 TTVLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIV 615

Query: 347 K-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K KR+   L   + N  SR V   +   +  +  P +    D+ IL    + + +     
Sbjct: 616 KGKRM---LLQKLWN-ASRLVYPFIA--NQRLDKPESLHIVDKWILQEHKKFVIKAINAY 669

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N   +  L ++ S   E+  D Y +      +K    +   +  Y    +IR + +LL 
Sbjct: 670 KNYDFYLVLQELYSYFWEIIADEYLEM-----IKHRLFEDDKSAKYTIQRIIRDIIVLLH 724

Query: 464 AFVPKLANKIFDILF 478
              P +  +I+  LF
Sbjct: 725 PIAPHITEEIYSRLF 739



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQG 127


>gi|323474647|gb|ADX85253.1| valyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 842

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLFLTKFYEDKNVFNKTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNIPF- 556

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             V  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +
Sbjct: 557 TTVLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIV 615

Query: 347 K-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K KR+   L   + N  SR V   +   +  +  P +    D+ IL    + + +     
Sbjct: 616 KGKRM---LLQKLWN-ASRLVYPFIA--NQRLDKPESLHIVDKWILQEHKKFVIKAINAY 669

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N   +  L ++ S   E+  D Y +      +K    +   +  Y    +IR + +LL 
Sbjct: 670 KNYDFYLVLQELYSYFWEIIADEYLEM-----IKHRLFEDDKSAKYTIQRIIRDIIVLLH 724

Query: 464 AFVPKLANKIFDILF 478
              P +  +I+  LF
Sbjct: 725 PIAPHITEEIYSRLF 739



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQG 127


>gi|94993549|ref|YP_601647.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|122986870|sp|Q1J8Q8|SYL_STRPF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94547057|gb|ABF37103.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 833

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|227114423|ref|ZP_03828079.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 860

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|219670052|ref|YP_002460487.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782390|sp|B8FT35|SYI_DESHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219540312|gb|ACL22051.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 922

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T++  T+  ++     K   WPADL++ G D  R  F++    +       
Sbjct: 523 IMDVWFDSGTSH--TSVLMER----KELAWPADLYMEGSDQHRGWFNSSLSTSVAAYGKA 576

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  KG K+SKSLGN +DP++V +E+G D LR ++ 
Sbjct: 577 PY-KAVLTHGFLVDEKGRKMSKSLGNGVDPLQVTKEMGADILRLWVC 622



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 25/139 (17%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K  +     Y N   H+GHA   +I D++ ++  + G D  +  G D HG  I +   
Sbjct: 47  RPKFVLHDGPPYANGDIHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQ-- 104

Query: 64  NAGVTTKVFVDQNSRN---FRDMA-----DVLDISYDDFIR------------TTEKRHH 103
              V  K+ V++++ +   FR M        + I  + F R            T EK + 
Sbjct: 105 ---VIKKLGVNRHAVSVVEFRRMCKEYAKKYISIQKEQFKRLGVRGDWQNPYLTLEKEYE 161

Query: 104 DTCRILWKKISDKGDIYKG 122
                ++ K++ K  IYKG
Sbjct: 162 AAQIGVFGKMARKKYIYKG 180


>gi|91776507|ref|YP_546263.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254071|sp|Q1GZB5|SYL_METFK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91710494|gb|ABE50422.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 817

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 10/253 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  +   YP+ + H+GH     I DVL+RFHR+ G +V+   G D  G     
Sbjct: 29  VSDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHRMRGYNVMQPMGWDAFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N  + +     L ++ D    I T +  ++   + L+ ++  KG 
Sbjct: 89  AAIKHNVAPAGWTYSNIEHMKGQLKSLGLAVDWQREIATCKPDYYRWEQWLFTELYKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK   +  +   D+    +++V    DG+ + +    V+  +   YF +++AY ++LL+
Sbjct: 149 IYKKTATVNWDPVDQTVLANEQVI---DGRGWRS-GALVEKRDIPQYFMKITAYAEELLA 204

Query: 179 ---YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
                +  PE +  ++R     S+       L++   T       PD      YV I A 
Sbjct: 205 DLDKLDGWPEQVKTMQRNWIGKSYGCEVEFPLAVGNGTLKVYTTRPDTLMGATYVAI-AA 263

Query: 236 TNYLTTTGYLDNP 248
            + L T    DNP
Sbjct: 264 EHALATQAAKDNP 276



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 16/132 (12%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+  + P   K+ + G +L  G K
Sbjct: 518 RANYWLPVDQYIGGIEHAILHLLYARFFNKLMRDVGLVRHDEPF-TKLLTQGMVLKDGSK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADLAN 356
           +SKS GN +DP E+I+  G D  R F++      + +     G        KRV   +AN
Sbjct: 577 MSKSKGNTVDPQELIDNYGADTARLFMMFAAPPEQSLEWSDAGVEGAHRFLKRVWTAVAN 636

Query: 357 GIGNLVSRSVSM 368
            + + +  + +M
Sbjct: 637 HVESGIVAAFTM 648


>gi|300870190|ref|YP_003785061.1| isoleucyl-tRNA-synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687889|gb|ADK30560.1| isoleucyl-tRNA-synthetase [Brachyspira pilosicoli 95/1000]
          Length = 938

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 8/114 (7%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFL 279
           D  Q I+ VW D+  +         + DG     +P D+++ G D  R  F A  WP+  
Sbjct: 541 DKEQDILDVWFDSGVSSFAAQKTNKDLDG----VFPVDIYLEGGDQYRGWFQAAIWPSMA 596

Query: 280 LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   +P  K++ +HG+ L  +G  + KS GNV+ P+EVI++ G D LR + + E
Sbjct: 597 IRG-IPPYKELVTHGWTLDEQGRAMHKSAGNVVSPLEVIDKYGADILRLWCISE 649



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-----GVTT 69
           Y N   HIG +   II D++ R+    G D  +  G D HG  I    Q +       T+
Sbjct: 75  YANGDIHIGTSLNKIIKDIIVRYKSAKGFDSPYVPGWDCHGMPIELKVQESLGDKYKETS 134

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKG 117
           K  + +  R +      +DI   +F R            T    +      ++ ++ +KG
Sbjct: 135 KFIMRKKCRAY--AQKYIDIQRKEFKRLGVMGDWENPYLTMSPEYESEIVEVFAQLVEKG 192

Query: 118 DIYKG 122
            IYKG
Sbjct: 193 YIYKG 197


>gi|61657325|emb|CAI44244.1| leucyl-tRNA synthetase [Thermotoga neapolitana]
          Length = 876

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 82  EKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENAA 141

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  Y
Sbjct: 142 IEKGIHPEEWTRKNISIIRKQVKRLGISYDWNREIATCDEEYYKWTQWIFLQLYKNGLAY 201

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +  + +    +++V    DG+      + V     E +FF+++ Y ++LL+  
Sbjct: 202 KKKAAVNWCPKCKTVLANEQV---KDGKCERCGTS-VTIKHLEQWFFKITDYAERLLNDL 257

Query: 181 E---SHPEFILPIER 192
           E     PE +  ++R
Sbjct: 258 EKLTGWPEHVKTMQR 272



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 22/192 (11%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
           +F+ G I   G K+SKS GNV+ P ++IE+ G D LR +++      KD  +   G++  
Sbjct: 620 LFTQGMIYKDGAKMSKSKGNVVSPDDMIEKYGADTLRMYILFMAPPEKDAEWSDAGIEGV 679

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            R    L N    ++       +   +G+  T     E    + S+  ++ ++I    + 
Sbjct: 680 HRFIRRLWNTFYTILPHVKEETV---EGLSLTTPVEKELRRKLHSIIKKITEDIEGGFK- 735

Query: 408 QLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A++ ++ L++ +++Y     +  W  K            +  E+   L ++L  F
Sbjct: 736 --FNTAISGLMELINHLNQYLSGVPEDQWNRK------------LLREIAENLTLVLSPF 781

Query: 466 VPKLANKIFDIL 477
            P LA + +  L
Sbjct: 782 APHLAEEFWHEL 793


>gi|58584620|ref|YP_198193.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|81311646|sp|Q5GSS3|SYI_WOLTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58418936|gb|AAW70951.1| Isoleucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 1134

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 27/268 (10%)

Query: 221 PDDP--QYIMY-------VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRF 270
           PDDP  + IM         W ++ +       Y  +N +  ++ F PAD   I + I + 
Sbjct: 564 PDDPTGKSIMRRVPDVFDCWFESGSVPFAQVHYPFENKEWFESNF-PADF--ITEYIAQT 620

Query: 271 HAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDAL 325
              ++  F+LS  L    P  K    HG +L  KG+K+SK L N  DP+EV ++ G DAL
Sbjct: 621 RGWFYTLFVLSTALFDSEPF-KNCICHGVVLDVKGQKLSKRLNNYADPMEVFDKYGSDAL 679

Query: 326 RYFLVR-EIACGKDGFYDKDGLKKR-VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           R+ ++   I CG + F +K+G   R V  ++   I N  S     +  + DG+       
Sbjct: 680 RFLMLSGSIVCGGNLFLNKEGSSIRDVLKNVMKPIWN--SYHFFTMYANADGIKAEVCKD 737

Query: 384 TES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            +S  D  ++  C   ++ I+ +M N     A   +I     ++ ++  +      K+N 
Sbjct: 738 YKSTIDSYMIFKCFEAVESIQASMSNYNSQEACKILIDFFEVLNNWYIRRSRERFWKSNL 797

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           D+  T  Y  +  +     +L+A VP L
Sbjct: 798 DQDKTDAYNVLYTV--FYYILRAAVPLL 823


>gi|251783405|ref|YP_002997710.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392037|dbj|BAH82496.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323128154|gb|ADX25451.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 833

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPDYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|224065184|ref|XP_002301705.1| predicted protein [Populus trichocarpa]
 gi|222843431|gb|EEE80978.1| predicted protein [Populus trichocarpa]
          Length = 951

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 17/140 (12%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  +R+ +   ++I  DP  ++  W  +     +T G+ D       KF+P  +   G D
Sbjct: 469 LEKAREKYGKNVEIYQDPD-VLDTWFSSALWPFSTLGWPDVSAEDFKKFYPTTMLETGHD 527

Query: 267 ILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
           IL F    W A ++      +  +P    V+ HG I   +G K+SK+LGNVIDP++ I+E
Sbjct: 528 ILFF----WVARMVMMGIEFTGTVPF-SYVYLHGLIRDSQGRKMSKTLGNVIDPLDTIKE 582

Query: 320 VGVDALRYFLVREIACGKDG 339
            G DALR+     I+ G  G
Sbjct: 583 FGTDALRF----TISLGTAG 598


>gi|189083220|sp|A3CKP1|SYL_STRSV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 833

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRTQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 203 LLNDLEELDWPESIKDMQR 221


>gi|56697855|ref|YP_168226.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81819951|sp|Q5LP30|SYV_SILPO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56679592|gb|AAV96258.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 1020

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 21/181 (11%)

Query: 167 FRLSAYQDKLL---SYYESHPE--FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           F  ++ QD LL   +YY ++ E  F    E  +  I+F   G  +    +KT    + + 
Sbjct: 525 FCAASEQDALLLAQNYYGANVEVDFDSGPEELSGGIAF---GTIEGPGGQKTLQ-SVSLT 580

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            DP  ++  W  +    + T G+ ++ D  + +++P  + + G DIL F    W A ++ 
Sbjct: 581 RDPD-VLDTWFSSGLWPIGTLGWPEDTDEMR-RYFPTSVLITGFDILFF----WVARMMM 634

Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L +  +V  H   LH      KG+K+SK+ GNVIDP+E+++E G DALR+      A 
Sbjct: 635 MQLAVVDQVPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADALRFTNASMAAI 694

Query: 336 G 336
           G
Sbjct: 695 G 695



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA+   + D+L R+HR+ G D L+  G D  G
Sbjct: 52 HVGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAG 86


>gi|126740704|ref|ZP_01756390.1| valyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126718219|gb|EBA14935.1| valyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 1023

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 38/334 (11%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           +E  FF  +  +D      E + E  ++ +E R E    + S        R   + GI  
Sbjct: 523 DELAFFCAANEEDLFAQLAEYYGEVGVVQVESRGEAEELINS-------FRFAVNSGIAS 575

Query: 221 PDDPQYIMYVWIDA------LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA 272
                 ++ VW D        ++ L   G L  P+ +    K++P    V G+DIL F  
Sbjct: 576 KLGEGLLVPVWRDPDVLDTWFSSGLWPIGTLGWPEDTAEMQKYFPTSTLVTGQDILFF-- 633

Query: 273 IYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
             W A ++   L +  +     V+ HG +   KG+K+SKS GNV+DP+E+I+E G DALR
Sbjct: 634 --WVARMMMMQLAVVDQIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEFGADALR 691

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAF 383
           +      A G     D + LK   N      + N V  + +   K YD  +P    P A 
Sbjct: 692 FSSAAMAALGGVLKLDMERLKGYRN--FGTKLWNAV--NFAHFNKVYDADVPAYTCPDAQ 747

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441
              ++ I+   ++V  E+   ++    + A   + +       D Y +  KP  L  ++ 
Sbjct: 748 AAVNQWIIGETAKVRVEVDAALEAYRFNDAANALYAFTWGKVCDWYIELSKP--LFNSDD 805

Query: 442 DRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474
           +        T+  V+ Q  ILL   +P +  +++
Sbjct: 806 EAVIAETRQTLGWVLDQCMILLHPIMPFITEELW 839



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 53 HMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVER 96


>gi|121998924|ref|YP_001003711.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166231613|sp|A1WYZ7|SYL_HALHL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121590329|gb|ABM62909.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 817

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 12/179 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  RPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYKRMQGYNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    R+    L   YD    + T +  ++   + L+ ++  KG +Y+
Sbjct: 92  ERGVPPAAWTRENIGAMREQLKGLGFGYDWSRELATCDPEYYRWEQWLFIRLYRKGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +  +   D+    +++V +G     G     +  P QW      F R++ Y D+LL
Sbjct: 152 DTAAVNWDPVDQTVLANEQVIEGRGWRSGALVERREIP-QW------FLRITDYADELL 203



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +H +     L+S++ P   ++ + G +L  G K+SKS GN +DP E+++  G D +R F 
Sbjct: 545 YHKVLRDEGLVSSDEPF-TRLLTQGMVLKDGTKMSKSKGNTVDPQELVDRFGADTVRLFT 603

Query: 330 V 330
           +
Sbjct: 604 M 604


>gi|327459525|gb|EGF05871.1| leucine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327490726|gb|EGF22507.1| leucine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 858

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  KDKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 227

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 228 LLNDLEELDWPESIKDMQR 246


>gi|323477379|gb|ADX82617.1| valyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 842

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLFLTKFYEDKNVFNKTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNIPF- 556

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             V  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +
Sbjct: 557 TTVLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIV 615

Query: 347 K-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K KR+   L   + N  SR V   +   +  +  P +    D+ IL    + + +     
Sbjct: 616 KGKRM---LLQKLWN-ASRLVYPFIA--NQRLDKPESLHIVDKWILQEHKKFVIKAINAY 669

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N   +  L ++ S   E+  D Y +      +K    +   +  Y    +IR + +LL 
Sbjct: 670 KNYDFYLVLQELYSYFWEIIADEYLEM-----IKHRLFEDDKSAKYTIQRIIRDIIVLLH 724

Query: 464 AFVPKLANKIFDILF 478
              P +  +I+  LF
Sbjct: 725 PIAPHITEEIYSRLF 739



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQG 127


>gi|297619713|ref|YP_003707818.1| isoleucyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378690|gb|ADI36845.1| isoleucyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 1053

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 25/269 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++PD    ++ VW D+    L     + + +  KA F       + K     HA+   + 
Sbjct: 536 RVPD----VLDVWYDS---GLAPYASIGSKELKKADFITEGHDQVTKWFYSQHAL---SE 585

Query: 279 LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L+  ++P  KK   HGF L  KGEK+SKSLGN+++P +VI + G D LR++L+      +
Sbjct: 586 LVFGDIPY-KKCLMHGFTLDEKGEKMSKSLGNIVNPDDVIAKYGADILRFYLLSANKAWE 644

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILSVCSR 396
           D  +    L++     + N + N  S SV+ M L D+   +         D+ ILS  + 
Sbjct: 645 DLRFAYSELEEV--RSMLNTLWNSYSFSVNYMTLDDFVPNMDYLENCRVEDKWILSKVNS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA---QKPWELKKTNPDRA--STVLYV 450
           +++   E ++   +H     +   V +++ R++      + W+ K +    A   T+ YV
Sbjct: 703 LVKTSMEALEQPFLHTYTWSIRDFVLNDLSRWYIKLIRDRTWQEKDSKDKLAVYQTLYYV 762

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +    +L +++   VP ++ KI+  L V
Sbjct: 763 LL----KLVMIMAPVVPHISEKIYQNLKV 787



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--- 64
           Y      Y +   H+G A+   I D + RF R++G +V    G D HG  I    +N   
Sbjct: 42  YFVDGPPYCSGAIHLGTAWNKTIKDTVLRFKRMEGFNVSDMAGWDMHGLPIEVKVENEFK 101

Query: 65  --------AGVTTKVFVDQ 75
                     + T+VF+D+
Sbjct: 102 LSSKKDIETKIGTQVFIDK 120


>gi|56421377|ref|YP_148695.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|60390659|sp|Q5KW09|SYL_GEOKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56381219|dbj|BAD77127.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 805

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +   ++   +     P+ QWM       +++AY D+LL
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVINGRSERGGHPVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPESIKEMQR 219



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P ++IE  G D LR +
Sbjct: 574 NEKMSKSKGNVVNPDDIIESHGADTLRLY 602


>gi|317491130|ref|ZP_07949566.1| leucyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920677|gb|EFV42000.1| leucyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 860

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNKTAPAPWTYDNIEYMKNQLKLLGFGYDWSREIATCDPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E+ PE +  ++R
Sbjct: 208 TLENWPEQVKTMQR 221


>gi|301059426|ref|ZP_07200347.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446462|gb|EFK10306.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 1011

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 7/184 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 183 REKYYLLEMFPYPSGKIHIGHVRNYTIGDVVARYKKMCGKNVLHPMGWDAFGMPAENAAI 242

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +  +N  N +     +  SY  D  + T +  ++   ++++ ++ +KG  Y 
Sbjct: 243 ENNTHPAKWTYENIENMKAQLKRMGFSYDWDRELATCDPDYYRWEQLVFLEMYEKGLAYR 302

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  +  W         N+    +  DG  +      V   E   +F +++ Y + +L Y 
Sbjct: 303 KKTHVNWCEKCQTVLANE----QVEDGCCWRHPEQEVAIKEMNSWFLKITDYAEDMLEYC 358

Query: 181 ESHP 184
           E  P
Sbjct: 359 EKLP 362



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 24/182 (13%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E+I+  G D +R F +      KD  + + G++         G    
Sbjct: 765 KMSKSKKNVVDPQELIDRYGADTVRMFCLFASPPDKDLEWSEQGVE---------GSHRF 815

Query: 362 VSRSVSMILKDYDGMIPTPG--AFTESDESILSV---CSRVLQEIRENMQNQL-IHRALA 415
           + R   ++  + + +    G    TE  E + SV       ++++ ++++N+   + A++
Sbjct: 816 LQRIWRLVTDNLEDLKTVKGFDEKTELQEPLKSVHRKTHETIKKVTDDIENRFHFNTAIS 875

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ LV+E +++ +         T   R +    V    +    ILL   VP + + ++ 
Sbjct: 876 AVMELVNETNQFLN---------TGEQRDAAAWAVVRRAVETTIILLSPVVPHITDHLWQ 926

Query: 476 IL 477
           ++
Sbjct: 927 LM 928


>gi|227830284|ref|YP_002832064.1| valyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579109|ref|YP_002837507.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|227456732|gb|ACP35419.1| valyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228009823|gb|ACP45585.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 842

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLFLTKFYEDKNVFNKTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNIPF- 556

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             V  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +
Sbjct: 557 TTVLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIV 615

Query: 347 K-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K KR+   L   + N  SR V   +   +  +  P +    D+ IL    + + +     
Sbjct: 616 KGKRM---LLQKLWN-ASRLVYPFIA--NQRLDKPESLHIVDKWILQEHKKFVIKAINAY 669

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N   +  L ++ S   E+  D Y +      +K    +   +  Y    +IR + +LL 
Sbjct: 670 KNYDFYLVLQELYSYFWEIIADEYLEM-----IKHRLFEDDKSAKYTIQRIIRDIIVLLH 724

Query: 464 AFVPKLANKIFDILF 478
              P +  +I+  LF
Sbjct: 725 PIAPHITEEIYSRLF 739



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQG 127


>gi|237839915|ref|XP_002369255.1| methionine tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211966919|gb|EEB02115.1| methionine tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1761

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 6/71 (8%)

Query: 228  MYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL 284
            +YVW DA+  YLT  G+   PD +  +F   WP  L V+GKDILRFH +  PA LL   L
Sbjct: 1113 VYVWFDAVVGYLTAAGF---PDVNSRRFRALWPPSLQVLGKDILRFHGVLLPALLLGVGL 1169

Query: 285  PLPKKVFSHGF 295
            PLP+++  HG+
Sbjct: 1170 PLPRRLLVHGW 1180


>gi|171463050|ref|YP_001797163.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692844|sp|B1XT72|SYL_POLNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171192588|gb|ACB43549.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 890

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y  + + YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 36  KKKSKYYACSMLPYPSGKLHMGHVRNYTINDVMARQLRMQGYNVLMPMGWDAFGMPAENA 95

Query: 62  A-QNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A QN     K   D  +   + MA + L I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  AIQNKVPPAKWTYDNIAYMKKQMAAMGLAIDWSREVATCNPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+      +   D+    +++V    DG+ + +    V+  E  GY+F ++AY + LLS
Sbjct: 156 YRKTQVVNWDPIDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYFNITAYAEPLLS 210


>gi|163782286|ref|ZP_02177284.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882319|gb|EDP75825.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 1171

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 22/195 (11%)

Query: 233 DALTNYLTTT----GYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           D L  + ++     G    P+ S+     +P DL V G DI+     +W A ++      
Sbjct: 725 DVLDTWFSSALWPFGVFGWPESSEDLKNLYPTDLLVTGFDII----FFWVARMIMMGTYF 780

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            + +  H   +H      KG+K+SK+ GNVIDP++VI++ G DALR+ L      G+D  
Sbjct: 781 MEDIPFHDVYVHALVRDEKGQKMSKTKGNVIDPLDVIKDYGADALRFTLAILTVQGRDIK 840

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                 KKR       AN I N     +     D+  M+P        D  I+++ +   
Sbjct: 841 LS----KKRFEGYKHFANKIWNATRFVLMNTPDDFATMLPYMAPLKPEDRWIMTLLNETA 896

Query: 399 QEIRENMQNQLIHRA 413
           +++   +++    RA
Sbjct: 897 EKVNRALESYDFSRA 911



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 15/89 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + D++AR+ R+ G  V++  G D           +AG+
Sbjct: 38  SVVIPPPNVTGSLHMGHALNSTLQDIVARWQRMKGRQVVWVPGFD-----------HAGI 86

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T+  VD+  +   +    L++   +FIR
Sbjct: 87  ATQYVVDKQLQE--EGKSRLELGRQEFIR 113


>gi|89895628|ref|YP_519115.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|123091718|sp|Q24TH1|SYI_DESHY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89335076|dbj|BAE84671.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 922

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T++  T+  ++     K   WPADL++ G D  R  F++    +       
Sbjct: 523 IMDVWFDSGTSH--TSVLMER----KELAWPADLYMEGSDQHRGWFNSSLSTSVAAYGKA 576

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  KG K+SKSLGN +DP++V +E+G D LR ++ 
Sbjct: 577 PY-KAVLTHGFLVDEKGRKMSKSLGNGVDPLQVTKEMGADILRLWVC 622



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 25/139 (17%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K  +     Y N   H+GHA   +I D++ ++  + G D  +  G D HG  I +   
Sbjct: 47  RPKFVLHDGPPYANGDIHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQ-- 104

Query: 64  NAGVTTKVFVDQNSRN---FRDMA-----DVLDISYDDFIR------------TTEKRHH 103
              V  K+ V++++ +   FR M        + I  + F R            T EK + 
Sbjct: 105 ---VIKKLGVNRHAVSVVEFRRMCKEYAKKYISIQKEQFKRLGVRGDWKNPYLTLEKEYE 161

Query: 104 DTCRILWKKISDKGDIYKG 122
                ++ K++ K  IYKG
Sbjct: 162 AAQIGVFGKMARKKYIYKG 180


>gi|154248157|ref|YP_001419115.1| valyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154162242|gb|ABS69458.1| valyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 930

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 12/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K KF+P  + V G DI+     +W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTMGWPDETAELK-KFYPTSVLVTGFDII----FFWVARMMMMGLHF 549

Query: 285 ---PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +P K V+ H  +   KG K+SKS GNVIDP++++E+ G DALR+ L    A G+D
Sbjct: 550 MDGEVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADALRFTLAAMAAQGRD 608



 Score = 44.7 bits (104), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 18/84 (21%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + DVLARF R+ G DVL+  GTD           +AG+
Sbjct: 39  SIVIPPPNVTGSLHMGHALNNTLQDVLARFERMRGKDVLWQPGTD-----------HAGI 87

Query: 68  TTKVFVD-----QNSRNFRDMADV 86
            T++ V+     Q     RDM  V
Sbjct: 88  ATQMVVERQLSAQKLPGRRDMGRV 111


>gi|241204404|ref|YP_002975500.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858294|gb|ACS55961.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 947

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W A ++   L L
Sbjct: 509 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHL 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDEDGEPVEPFETVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|154250101|ref|YP_001410926.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769391|sp|A7HMY6|SYI_FERNB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154154037|gb|ABS61269.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 913

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 17/157 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VWID+  ++            SK + +P DL++ G D  R  F +  + A   + N P  
Sbjct: 523 VWIDSGCSWEAVIR-------SKGEKFPVDLYLEGDDQHRGWFQSSIFLATAKTGNAPF- 574

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K V +HGFI   +G K+SKSLGNVIDP+E++ + G D LR ++        I  GK+   
Sbjct: 575 KTVVTHGFIKDEQGRKMSKSLGNVIDPMEIVNKYGADILRLWVASTDFFDNIRVGKNIIE 634

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  + +++   L   + NL   + + IL  Y+ ++P
Sbjct: 635 QQVEVYRKLRNTLRYLLSNLYDFTENDILP-YEKLLP 670


>gi|319791139|ref|YP_004152779.1| leucyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315593602|gb|ADU34668.1| leucyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 876

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 6/180 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I D+L R+ R+ G +VL   G D  G     AA 
Sbjct: 32  RKKYYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    R    A  L I +   I T +  ++   + L+ K+ +KG  Y+
Sbjct: 92  KNGVPPAKWTYENIDYMRGQLQAMGLAIDWSREIATCDPSYYKWNQWLFLKMLEKGVAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +      V+  E  GY+ ++S Y ++LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGKGWRTGAT-VERREIPGYYLKISDYAEELLEHTQ 207


>gi|261418142|ref|YP_003251824.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767898|ref|YP_004133399.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374599|gb|ACX77342.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112764|gb|ADU95256.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 805

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +   ++   +     P+ QWM       +++AY D+LL
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVINGRSERGGHPVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPESIKEMQR 219



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P ++IE  G D LR +
Sbjct: 574 NEKMSKSKGNVVNPDDIIESHGADTLRLY 602


>gi|49474717|ref|YP_032759.1| leucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|60390695|sp|Q6FYL6|SYL_BARQU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49240221|emb|CAF26690.1| Leucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 880

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFDVLHPMGWDAFGMPAENAAL 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + V  K +  QN    R     L +S D   +F  T +  ++   ++L+  +  KG + 
Sbjct: 99  QSKVHPKTWTYQNIAVMRGQLKQLGLSLDWSREFA-TCDVAYYHRQQMLFLDLYQKGLVA 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G  G    A    V+  E   +FF++S + + LL+  
Sbjct: 158 RKVAKVNWDPVDQTVLANEQVVDGC-GWRSGAL---VEQRELAQWFFKISDFSEDLLAGL 213

Query: 181 E 181
           E
Sbjct: 214 E 214



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 24/195 (12%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
           + I YV +D     L T G + +      + W  PA++ +I KD  R            A
Sbjct: 574 KLIGYVTVDEPFKGLFTQGMVVHETYRDDQGWVSPAEISIIEKDGKR-----------QA 622

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +    +   + G I    EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + 
Sbjct: 623 HKLTDQSEVTIGLI----EKMSKSKKNVVDPDDIIASYGADTVRWFVLSDSPPERDVIWT 678

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G++       A      V R V +       +IP  G    + E +     R+L  + 
Sbjct: 679 ESGVEG------AYRFVQRVWRCVVLSAPVLKEVIPCTGHQGAALE-LSKAAHRMLCTVE 731

Query: 403 ENMQNQLIHRALAQV 417
           ++++    +RA+A++
Sbjct: 732 DDLEKFAFNRAIARL 746


>gi|327282139|ref|XP_003225801.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 904

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 5/187 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +ARF ++ GL V+   G D  G     A
Sbjct: 79  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDTVARFQKMRGLRVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R   D L +S+  D  I T    ++   + ++ K+ + G +
Sbjct: 139 AIEHGLHPAQWTQSNIQHMRKQLDALGLSFSWDREIATCFSEYYKWTQYIFLKLYEAGLV 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   VQ    + +F + SAY   +L  
Sbjct: 199 YQNEAMVNWDPVDQTVLANEQVDENGCSWRSGAK---VQKKYLKQWFIKTSAYAKSMLDG 255

Query: 180 YESHPEF 186
               P++
Sbjct: 256 LSDLPKW 262



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 16/135 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N I+P E++++ G+D +R +++      +D  +D       V  D   G+  
Sbjct: 639 EKMSKSKHNGIEPEEMVQQYGIDTVRLYILFAAPPEQDILWD-------VKTDAIPGVQR 691

Query: 361 LVSR----SVSMILKDYDGMIPTPGAFT--ESDES--ILSVCSRVLQEIREN-MQNQLIH 411
             SR    +  +I     G +P+P      E DE+  I    +  + ++ E  +++ L +
Sbjct: 692 WQSRLWHLATKLIEARNSGTLPSPQLLNQKEKDEAKRIWKQKNHAVSQVTEYFLEDYLFN 751

Query: 412 RALAQVISLVSEVDR 426
            A++Q++SL + + +
Sbjct: 752 AAISQLMSLSNALSQ 766


>gi|322384104|ref|ZP_08057822.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151184|gb|EFX44493.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 896

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G  +         WPADL++ G D  R  F++       +    
Sbjct: 498 IMDVWFDSGSSHAAVLGQRNELS------WPADLYLEGSDQYRGWFNSSLITGVAVKEEA 551

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF L  +G K+SKS+GN IDP +V E++G D LR ++ 
Sbjct: 552 PY-KGVLSHGFTLDGEGRKMSKSIGNTIDPNQVCEKLGADILRLWVA 597



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 21/156 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  +     Y N   HIGHA   ++ D + RF  + G D  +  G D HG  I +A  
Sbjct: 21  KPKFILHDGPPYANGDIHIGHALNKLLKDFIIRFKTMQGYDAPYVPGWDTHGLPIEQAIA 80

Query: 64  NAGVTTKVFVDQNS-RNFRDMADVLDISY-----DDFIR------------TTEKRHHDT 105
           N+G   KV   Q S   FR+      + +     + FIR            T +  +   
Sbjct: 81  NSG---KVDRKQMSVPEFREYCKEYAMKWVEKQKEQFIRLGVRGDWEHPYITLQPEYEAE 137

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              L+ K+  KG IYKG    ++S   E+   + E+
Sbjct: 138 QIRLFGKMVRKGYIYKGLKPVYWSPSSESALAEAEI 173


>gi|297529000|ref|YP_003670275.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252252|gb|ADI25698.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 805

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +   ++   +     P+ QWM       +++AY D+LL
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVINGRSERGGHPVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPESIKEMQR 219



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P ++IE  G D LR +
Sbjct: 574 NEKMSKSKGNVVNPDDIIESHGADTLRLY 602


>gi|256846981|ref|ZP_05552427.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715645|gb|EEU30620.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 931

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PADL++ G D  R  F++    + ++S
Sbjct: 525 IMDVWFDSGSSHQGVLNERSYLT---------YPADLYLEGSDQYRGWFNSSMITSVVVS 575

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L  KG+K+SKSLGNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KSVLSQGFTLDKKGKKMSKSLGNVIDPAKVVQQMGAEIIRLWVM 624



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      +G   K    
Sbjct: 58  YANGNIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKSGYDRK---K 114

Query: 75  QNSRNFRDMA 84
            ++  FRD+ 
Sbjct: 115 MSTAEFRDLC 124


>gi|89898154|ref|YP_515264.1| isoleucyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331526|dbj|BAE81119.1| isoleucyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 1043

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 22/263 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   ++A F PAD    G D  R    ++   ++S+ L
Sbjct: 514 YVFDCWFDSGAMPYAQNHYPFENQKETEAAF-PADFIAEGLDQTR--GWFYTLTVISSAL 570

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K    +G +L + G K+SK L N   PI ++   G DALR +L+  +    +  
Sbjct: 571 FDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPIGIMNTYGADALRLYLLNSVVVKAEDL 630

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K++   L N + +       +   D D       A++E D+ ILS    
Sbjct: 631 RFSDKGVESILKQILLPLTN-VLSFFKTYTDLYGFDADMYGKEEIAYSEIDKWILSDLYT 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           V+ ++RE+M +  ++ A++  +S + ++  ++     ++ WE + T PDR  A   LY  
Sbjct: 690 VVGKVRESMNSYNLNTAVSPFVSFIDDLTNWYIRRCRRRFWESEDT-PDRRAAFATLY-- 746

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+     ++  F+P ++  I+
Sbjct: 747 -EVLTVFCRVIAPFIPFISEDIY 768


>gi|327468643|gb|EGF14122.1| leucine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 861

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 230

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 231 LLNDLEELDWPESIKDMQR 249


>gi|284997707|ref|YP_003419474.1| valyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445602|gb|ADB87104.1| valyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 842

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLFLTKFYEDKNVFNKTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNIPF- 556

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             V  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +
Sbjct: 557 TTVLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIV 615

Query: 347 K-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K KR+   L   + N  SR V   +   +  +  P +    D+ IL    + + +     
Sbjct: 616 KGKRM---LLQKLWN-ASRLVYPFIA--NQRLDKPESLHIVDKWILQEHKKFVIKAINAY 669

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N   +  L ++ S   E+  D Y +      +K    +   +  Y    +IR + +LL 
Sbjct: 670 KNYDFYLVLQELYSYFWEIIADEYLEM-----IKHRLFEDDKSAKYTIQRIIRDIIVLLH 724

Query: 464 AFVPKLANKIFDILF 478
              P +  +I+  LF
Sbjct: 725 PIAPHITEEIYSRLF 739



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQG 127


>gi|296086574|emb|CBI32209.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 49/216 (22%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   E     I+P ER  ++ +   S +KD  +SR+ + WG +IP   
Sbjct: 160 WFVTMEPLAEKALQAVERGELTIMP-ERFEKIYNHWLSNIKDWCISRQLW-WGHRIPVWY 217

Query: 222 -----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNP 248
                 + +YI+                              W  +     +T G+ D  
Sbjct: 218 IVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVS 277

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEK 302
                KF+P  +   G DIL F    W A ++   +     V     + HG I   +G K
Sbjct: 278 TQDFKKFYPITVLETGHDILFF----WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRK 333

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 334 MSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 368


>gi|169832567|ref|YP_001694056.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995069|gb|ACA35681.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 883

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 30/268 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA---STV 447
             +  + ++ EN        A   + + + E   + Y +  K         D+    S +
Sbjct: 616 NLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEDDKVITRSVL 675

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
           LY   +++R    LL   +P +  +IFD
Sbjct: 676 LYTLDKILR----LLHPIMPFVTEEIFD 699



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|322412788|gb|EFY03696.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 833

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGSGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPDYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 37/182 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV++P +V+E+ G D LR + +          + ++GL+         G    
Sbjct: 610 KMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLE---------GSRKF 660

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R   ++         T    TE+  ++  V +  ++ + E ++    + A+AQ++  V
Sbjct: 661 LDRVYRLVT--------TKEIVTENSGTLDKVYNETVKAVTEQIETMKFNTAIAQLMIFV 712

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  ++                     L+  V+  +    L+  F P L  +++ ++  +D
Sbjct: 713 NAANK------------------ENQLF--VDYAKGFVQLIAPFAPHLGEELWQMITQSD 752

Query: 482 EN 483
           E+
Sbjct: 753 ES 754


>gi|253699409|ref|YP_003020598.1| leucyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511544|sp|C6E100|SYL_GEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251774259|gb|ACT16840.1| leucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 824

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  RKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    R     L +SY  D  + T +  ++   + ++ ++  KG  YK
Sbjct: 92  QHKSHPAKWTYENIAYMRGQLKTLGLSYDWDRELATCDLDYYKWEQRIFLEMYKKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +  + E    +++V    DG  +    +PV+  E E + FR++ Y  +LL    
Sbjct: 152 KSSAVNWCPKCETVLANEQV---EDGCCWRCD-SPVRQKELEQWSFRITNYAQELLDDTY 207

Query: 179 YYESHPEFILPIER 192
                PE +L ++R
Sbjct: 208 KLTGWPERVLTMQR 221



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 26/238 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKG 300
           D  K + W P D ++ G +    H +Y   F      L   N+  P   + + G ++  G
Sbjct: 520 DREKVEAWMPVDQYIGGIEHAVLHLLYARFFTKVLRDLGYCNVDEPFSNLLTQGMVIKDG 579

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP  +IE  G D  R F +      KD  +   G+         N +  
Sbjct: 580 AKMSKSKGNVVDPNALIERYGADTARLFSLFAAPPEKDLDWSDQGVDGSYR--FLNRVWR 637

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           LV   + +I +   G +  P +     + +     + ++++ E+++ +   + A+A V+ 
Sbjct: 638 LVYDVLPVIGE--AGAV-NPDSLGAEAKKLRRAVHKTIKKVSEDVEERFHFNTAIAAVME 694

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LV+ +  +          K  P+  + V      V+R    LL  FVP  A +++  L
Sbjct: 695 LVNAIQAF--------AAKDAPENVAVVREAVESVVR----LLAPFVPHFAEELWSQL 740


>gi|196250006|ref|ZP_03148701.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|189030345|sp|A4IRY3|SYL_GEOTN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196210520|gb|EDY05284.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 805

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +   ++   +     P+ QWM       +++AY D+LL
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVINGRSERGGHPVIRKPMRQWM------LKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPESIKEMQR 219



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 21/186 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W   L    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKQWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +++E  G D LR + +          +   GL         +G  
Sbjct: 574 NEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGAR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             + R   + + + DG +  P    E +++++  V  + ++++ E+ +    + A++Q++
Sbjct: 625 RFLERVWRLFVTE-DGQL-NPNIVDEPANDTLERVYHQTVKKVTEDYEALRFNTAISQLM 682

Query: 419 SLVSEV 424
             ++E 
Sbjct: 683 VFINEA 688


>gi|11499806|ref|NP_071049.1| valyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122909|sp|O28059|SYV_ARCFU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2648303|gb|AAB89032.1| valyl-tRNA synthetase (valS) [Archaeoglobus fulgidus DSM 4304]
          Length = 863

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 12/193 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L   G+         K +P  L   G DI+R  A Y    +  L   +
Sbjct: 446 VLDTWMDSSITPLMICGW------PSLKEYPTHLRPQGHDIIRTWAFYTILRSLALEGQI 499

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKSLGNVI P EV+E+ GVDALR +    +  G D  ++  
Sbjct: 500 PWYEIVINGMVFGEDGRKMSKSLGNVIVPEEVVEKYGVDALRQWAASGV-IGDDIIFN-- 556

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
             K  + A         ++R   M + DY           ++D  ILS  +R++ E+R++
Sbjct: 557 -WKDVIAASRFQQKFWSITRFTLMHISDYTPSEEDKKLLRDADRWILSKLNRLVGEVRKH 615

Query: 405 MQNQLIHRALAQV 417
           M       A+  +
Sbjct: 616 MDEYRFDEAIKAI 628



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 17/135 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKA 61
           E+    I T   YP    HIGHA    I D +AR+ R++G +V+F  G D HG     K 
Sbjct: 32  EKPHYIIDTPPPYPTGSFHIGHALNWCIIDFIARYKRMNGYEVMFPQGWDCHGLPTEVKV 91

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTC 106
            +  G+                F ++N    R+ A  +  S D   ++I T    ++   
Sbjct: 92  EEKYGIKKGDIPRDEFRRLCVEFTEENIAKMRETARRMGYSIDWSKEYI-TMYPEYYSKT 150

Query: 107 RILWKKISDKGDIYK 121
           ++ + ++ +KG IY+
Sbjct: 151 QLSFVRMYNKGLIYR 165


>gi|327490058|gb|EGF21846.1| valine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 883

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++   L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPF----WVSRMIFQGLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K    HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 499 TGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|312868060|ref|ZP_07728264.1| leucine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096464|gb|EFQ54704.1| leucine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 833

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 T 205


>gi|325980977|ref|YP_004293379.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530496|gb|ADZ25217.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 881

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+R+HR+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMQGFNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V+   +   N    R     L +S D    I T +  ++   + L+ ++ ++G  Y+
Sbjct: 92  QNTVSPAKWTYDNIAYMRKQLKSLGLSIDWEREITTCDPSYYHWNQWLFLRMLEQGLAYQ 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G  G    A   PV+  E   Y+ +++ Y D+LL+
Sbjct: 152 TTGTVNWDPIDQTVLANEQVIDGC-GWRTGA---PVEKREIPMYYLKITQYADELLN 204


>gi|262199611|ref|YP_003270820.1| leucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262082958|gb|ACY18927.1| leucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 854

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 9/196 (4%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K YI     YP+ A  H+GH    +  DV+AR  R+ G +VL   G D  G    +
Sbjct: 29  RTKPKFYILDMFPYPSGAGLHVGHPKGYVATDVVARAKRMMGFNVLHVMGWDSFGLPTER 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G +      +N   F++  + L +SYD    + T+++ ++   + ++ K+ +KG 
Sbjct: 89  QAVREGRSPAEITARNVGRFKEQLENLGLSYDWSRELATSDEAYYRWTQWIFLKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV    DG+Y     +PV+    + +  R++AY D+LL 
Sbjct: 149 AYQAEVAVNWCPALGTVLANEEV---QDGKYVETG-DPVERRSMKQWMLRITAYADRLLD 204

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 205 GLEDLDWPEGIKEMQR 220


>gi|138896379|ref|YP_001126832.1| leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267892|gb|ABO68087.1| Leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 811

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 35  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 95  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 154

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +   ++   +     P+ QWM       +++AY D+LL
Sbjct: 155 YMDEVPVNWCPALGTVLANEEVINGRSERGGHPVIRKPMRQWM------LKITAYADRLL 208

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 209 EDLEELDWPESIKEMQR 225



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 21/186 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W   L    +   K    K+F+ G IL   
Sbjct: 520 DPEKLKQWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEN 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +++E  G D LR + +          +   GL         +G  
Sbjct: 580 NEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGAR 630

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             + R   + + + DG +  P    E +++++  V  + ++++ E+ +    + A++Q++
Sbjct: 631 RFLERVWRLFVTE-DGQL-NPNIVDEPANDTLERVYHQTVKKVTEDYEALRFNTAISQLM 688

Query: 419 SLVSEV 424
             ++E 
Sbjct: 689 VFINEA 694


>gi|257452225|ref|ZP_05617524.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058768|ref|ZP_07923253.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684444|gb|EFS21279.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 887

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 26/262 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    ++P    V G DI+ F       F L    
Sbjct: 452 VLDTWFSSALWPFSTMGW---PEKTKELELYYPTSTLVTGADIIFFWVARMIMFGLYEMK 508

Query: 285 PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P   VF HG +    G K+SKSLGN  +P+++I++ G DA+R+ ++   + G+D  + 
Sbjct: 509 DIPFHNVFFHGIVRDDLGRKMSKSLGNSPNPLDLIDQYGADAIRFSMIYNTSQGQDVRFS 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVL 398
           +  L+  +  + AN I N  SR V M L+D+D  I T       +   DE I+S     L
Sbjct: 569 EKLLE--MGRNFANKIWN-ASRFVMMNLEDFD--INTFDVKEVKYELVDEWIIS----RL 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           QE  + ++ +L +  L      V E       D Y +  K       +     T  YV  
Sbjct: 620 QETAKAVETRLANFQLDDAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLW 679

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++     LL  F+P ++ +I+
Sbjct: 680 SMLESGLRLLHPFMPYISEEIW 701


>gi|254787750|ref|YP_003075179.1| leucyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237683615|gb|ACR10879.1| leucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 834

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 47  KEKFYCLAMFPYPSGRLHMGHVRNYTITDVIARFQRMQGKNVLHPMGWDAFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N+   R     L   +D    + T +  ++   +  + ++ +KG  YK
Sbjct: 107 KNNTAPAKWTYANTDYMRSQLKELGFGFDWTREVTTCKPDYYRWEQWFFTRLYEKGLAYK 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V +G   +       PV+  E   +F R++ Y ++LL   +
Sbjct: 167 KVSAVNWCPNDQTVLANEQVVEGCCWRC----DTPVERKEIPQWFIRITDYAEELLKDLD 222

Query: 182 SHPEF 186
             P +
Sbjct: 223 KLPHW 227



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 53/248 (21%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  KA +W P D +V G +    H +Y   F        L++ + P  +++   G +L  
Sbjct: 531 DSDKANYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLVACDEPF-ERLLCQGMVLKD 589

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK----------KR 349
           G K+SKS GN +DP E+I + G D +R F +      +   +   G++          K 
Sbjct: 590 GTKMSKSKGNTVDPAELIGQYGADTVRLFTMFAAPPEQSLEWTDSGVEGAFRFLKKLWKT 649

Query: 350 VNADLANG-IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QN 407
           V   LA G  G L                  P    ++ + +       + ++ ++  + 
Sbjct: 650 VQTHLAAGEPGEL-----------------NPAELNDTQKDLRRKTHETIAKVTDDYGRR 692

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFV 466
           Q  + A+A V+ L++EV R             N DRA+   L V  E +     +L   V
Sbjct: 693 QTFNTAIAAVMELLNEVGR-------------NADRANEQGLSVEREALEAAVQVLAPIV 739

Query: 467 PKLANKIF 474
           P + ++++
Sbjct: 740 PHICHELW 747


>gi|284929199|ref|YP_003421721.1| valyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809643|gb|ADB95340.1| valyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 908

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 13/175 (7%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L  +RK +   I++  DP  ++  W  +     +T G+ +N +   A ++P    V G D
Sbjct: 447 LEKARKEYGNDIQLKQDPD-VLDTWFSSGLWPFSTLGWPENTEDF-ATYYPTSTLVTGFD 504

Query: 267 ILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    +   A   +  +P  K V+ HG +    G+K+SKS  N IDP+ +I++ G D
Sbjct: 505 IIFFWVARMTMMAGYFTDQMPF-KDVYIHGLVRDENGKKMSKSSNNGIDPLILIDKYGTD 563

Query: 324 ALRYFLVREIA-CGKD---GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKD 372
           ALRY L++E+A  G+D    +  K    + V A  + AN + N  +R V M LK+
Sbjct: 564 ALRYTLIKEVAGAGQDVTLQYNRKTNESESVEASRNFANKLWN-AARFVIMNLKE 617



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          ++EK++    I  PN     H+GHA+E  + DVL R+HR+ G + L   GTD
Sbjct: 37 KKEKIF-CMVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMSGKNTLCLPGTD 87


>gi|262377098|ref|ZP_06070323.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307836|gb|EEY88974.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 948

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 31/175 (17%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K + +HGF++  KG K+SKS+GNVI P
Sbjct: 568 PADLYLEGSDQHRGWFQSSLLTSIAINERAPY-KGLLTHGFVVDEKGRKMSKSIGNVITP 626

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFY-DKDGLKKRVNADLANGIGNLVSRSVS 367
            ++I+++G D LR+++       E+  GK+ F    DG ++             +  ++ 
Sbjct: 627 QDIIKDMGADGLRFWIASADYRYEMTAGKEIFSRASDGYRR-------------IRNTLR 673

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIR---ENMQNQLIHRAL 414
            +L + +G  P+  A         D+ IL   S V + I+   E+M   ++  AL
Sbjct: 674 FLLANLNGFKPSTDALPVDQLIALDQYILQRASEVQETIKKAYEDMNFHIVTTAL 728



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N Q H+GHA   ++ D++ +   +DG D  +  G D HG  I  K  
Sbjct: 57  KKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV V  ++  FR          +++   DF+R
Sbjct: 117 EKVG---KVGVKVDASTFRKACREYAYTQVELQKKDFVR 152


>gi|255326617|ref|ZP_05367694.1| valyl-tRNA synthetase [Rothia mucilaginosa ATCC 25296]
 gi|255296357|gb|EET75697.1| valyl-tRNA synthetase [Rothia mucilaginosa ATCC 25296]
          Length = 910

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 15/260 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           DP  ++  W  +       TG+  NPD   AK +P DL   G DI+R    +    A  L
Sbjct: 521 DPD-VLDTWATSSLTPQIATGWGVNPD-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           ++++P      S   +    +K+SKS GNV+ P EV+E+ G DA+RY+       G D  
Sbjct: 579 ASSVPWYNTALSGWILDPDRKKMSKSKGNVVVPNEVLEKYGSDAVRYWAA-SARLGADTA 637

Query: 341 YDKDGLK--KRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           YD+  +K  +R+   L N    + NL +   S+I     G +         D S+L+  +
Sbjct: 638 YDEGQMKIGRRLAIKLLNASKFVLNLGATEKSVITSQAQGRV----LINALDRSLLARLA 693

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++E     +     RAL    S   S  D + +  K            ++VL      
Sbjct: 694 YLIEEATAAFEKYEYARALQICESFFWSFTDDFVELIKDRAYGARGEQEQASVLAALATT 753

Query: 455 IRQLAILLQAFVPKLANKIF 474
           +  L  L   F+P +  +I+
Sbjct: 754 LDALLRLFAPFLPFVTEEIW 773



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REQVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMTGKNVFYPLGWDDNGLPTERRV 106

Query: 63  QN-AGVTTKVFVDQNSRNFRDM 83
           QN  GV     V  N  +FRD+
Sbjct: 107 QNYYGVLCDPSVADND-SFRDL 127


>gi|125717163|ref|YP_001034296.1| leucyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125497080|gb|ABN43746.1| Leucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 837

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 33  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRTQGYNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 93  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 152

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 153 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 206

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 207 LLNDLEELDWPESIKDMQR 225


>gi|325977354|ref|YP_004287070.1| leucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177282|emb|CBZ47326.1| leuS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 833

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAQNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 203

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 204 LEDLEDLDWPESIKDMQR 221


>gi|319899110|ref|YP_004159203.1| Valyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403074|emb|CBI76629.1| Valyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 907

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 35/277 (12%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLS- 281
           Q ++  W  +     +T G+   PD +     F+P  L V G DI+ F    W A ++  
Sbjct: 476 QDVLDTWFSSALWPFSTLGW---PDKTMELTNFYPTSLSVTGFDIIFF----WVARMMMM 528

Query: 282 -----ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P P  V+ H  +  + G K+SKS GN++DP+E+I++   DALR+ L    A 
Sbjct: 529 GIHFMGEVPFPT-VYVHALVRDQHGAKMSKSKGNIVDPLELIDQYSADALRFTLAIMAAQ 587

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLV------SRSVSMILKDYDGMIPTPGAFTESDES 389
           G+D          ++N     G  N +      +R   M    +D            +  
Sbjct: 588 GRD---------VKLNPSRVAGYRNFITKLWNATRFAEMNGVRHDLSFKPEKTKLAFNRW 638

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTV 447
           IL+  S+ +  + + ++N   + A   +   +  +  D Y +  KP   + ++ D     
Sbjct: 639 ILTELSKTVSAVTKGIENYKFNDAAHALYRFIWNALCDWYLELLKP-VFQGSDEDSKKEA 697

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
              T  V+ ++  LL  F+P +  +++ +  + D  R
Sbjct: 698 QACTAWVLDEVYKLLHPFMPHVTEELWSLTAMQDMKR 734


>gi|302342845|ref|YP_003807374.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639458|gb|ADK84780.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 830

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I D LAR  R+ G +VL   G D  G     AA 
Sbjct: 39  KPKYYLLEMFPYPSGRIHMGHMRVYSIGDALARLKRMRGFNVLHPMGWDAFGMPAENAAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    R     L  SYD    + T +  ++   ++++ K+ +KG +Y+
Sbjct: 99  AHHTHPAKWTYENIAYMRGQLKKLGFSYDWRRELATCDPSYYRWEQLVFIKMWEKGLVYR 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V    DG+ +       Q  +  GYFFR++ Y  +LL + E
Sbjct: 159 KKSLVNWCAKCQTVLANEQV---EDGKCWRCDSE-AQKKQMHGYFFRITDYVQELLDHTE 214

Query: 182 ---SHPEFILPIER 192
                PE +L ++R
Sbjct: 215 KLPGWPERVLTMQR 228



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 31/246 (12%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y+D P D ++  +W P D +V G +    H +Y   F        +L  + P    + + 
Sbjct: 521 YVDGPLDPARVDYWMPVDQYVGGIEHAVLHLLYSRFFVKVLRDLGMLKVDEPF-LNLLTQ 579

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G ++  G K+SKS GNV+DP +++   G D +R F +      +D  +   G++      
Sbjct: 580 GMVIKDGAKMSKSKGNVVDPDDMVARYGADTVRLFSLFAAPPERDLEWSDQGVEG----- 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            A+     + R    + +   G  P P  G   E          +V ++      N  I 
Sbjct: 635 -AHRFLGRLWRLGLAVAETPAGERPGPCDGPLGELRRKAHETIKKVTEDTDRFQFNTAIA 693

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            AL ++I+ +S V++  DA         +P RA+    V  E +    +L+    P +A+
Sbjct: 694 -ALMELINQISLVEQ--DAA-----LADDPRRAA----VLREAVEAAVVLISPMAPHIAD 741

Query: 472 KIFDIL 477
           +++  L
Sbjct: 742 ELWSRL 747


>gi|162447562|ref|YP_001620694.1| isoleucine amino-acyl tRNA synthetase [Acholeplasma laidlawii
           PG-8A]
 gi|259511492|sp|A9NG38|SYI_ACHLI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161985669|gb|ABX81318.1| isoleucine amino-acyl tRNA synthetase [Acholeplasma laidlawii
           PG-8A]
          Length = 896

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T+Y        N    +   +PAD+++ G D  R  F++    A  +    
Sbjct: 515 IMDVWFDSGTSY--------NILKRRGLPFPADMYLEGSDQYRGWFNSSLTTAIAVDGVS 566

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ SHGF+L  KG K+SKSLGNVIDP+ V+ + G D LR ++ 
Sbjct: 567 PY-KEIVSHGFVLDGKGRKMSKSLGNVIDPLTVMNDQGADVLRLWVA 612



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA++  + D + R+  + G    +  G D HG  I      +GV  K    
Sbjct: 58  YANNNIHIGHAFQKTLKDFVLRYQTMSGRYTPYIPGWDTHGLPIENEVTKSGVDRKQLTR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRH-HDTCRILWKKISDKG 117
                         V+     F+ +  + D  +D+   T +K +  D  R+   ++ DKG
Sbjct: 118 AEFRKICREYAIKQVEVQRAQFKRLGILGD--WDNPYLTLDKSYIADQVRVF-SQMVDKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+ + + E+
Sbjct: 175 IIYKGLKPIYWSPSSESAFAEAEI 198


>gi|288904357|ref|YP_003429578.1| leucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731082|emb|CBI12628.1| leucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 833

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAQNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 203

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 204 LEDLEDLDWPESIKDMQR 221


>gi|284009232|emb|CBA76326.1| leucyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 871

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ Q H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 43  KEKYYCLSMLPYPSGQLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T    ++   +  + K+ +KG +YK
Sbjct: 103 KNNTAPAPWTYANIEYMKNQLKMLGFGYDWSREVTTCTPEYYRWEQWFFTKLYEKGLVYK 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D     +++V    DG  +     PV+  E   +F +++AY ++LL+
Sbjct: 163 KTSAVNWCPNDLTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITAYAEELLN 215


>gi|229091176|ref|ZP_04222399.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228692307|gb|EEL46043.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 1033

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +  +  A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQLTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|330427922|gb|AEC19256.1| isoleucyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 947

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 33/264 (12%)

Query: 230 VWIDALTNYLTTTGYLD-NPDGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T + T  G  D N  GS      WPADL++ G D  R  FH+      +L    
Sbjct: 545 VWFDSGTTHATVLGGQDHNVKGSHVNDLTWPADLYLEGSDQHRGWFHSSLLTGCMLYGRP 604

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF++  +G K+SKS+GNVI P +V + +G + LR +       G+    D+
Sbjct: 605 PY-KALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDALGAEILRLWTASTDYSGELSISDE 663

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVL 398
             + KRV           +  ++  +L +     P      P    E D   L++ + + 
Sbjct: 664 --ILKRVVEGYRR-----IRNTLKFLLGNLQDFNPAADAVEPEHLFEIDRYALAMTAAMQ 716

Query: 399 QEIRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVL 448
            E+ +  +    H A++++    SE           DR + A K    +++    A T +
Sbjct: 717 AEVLDCYKRYEFHPAVSRLQIFCSEDLGAFYLDVLKDRLYTAGKTSVARRS----AQTAV 772

Query: 449 YVTVEVIRQLAILLQAFVPKLANK 472
           Y     + +L   + +F  + A K
Sbjct: 773 YHVTHTLLKLLAPIVSFTAEEAWK 796



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           K R K  +     Y N   HIGHA   I+ D++ +   + G D ++  G D HG      
Sbjct: 45  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIKSRAMAGYDAVYVPGWDCHGMPIEIQ 104

Query: 56  --QKIAKAAQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             +K  K    A V  K        +D+  ++F+ +  VL    + ++        D  R
Sbjct: 105 IEKKYGKHLPVAEVQAKARAYALEQIDRQRKDFKRLG-VLGDWDNPYLTMNFGNEADELR 163

Query: 108 ILWKKISDKGDIYKG 122
            L  +I +KG +++G
Sbjct: 164 AL-ARIMEKGYVFRG 177


>gi|325690919|gb|EGD32919.1| valine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 882

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|55820318|ref|YP_138760.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822208|ref|YP_140649.1| leucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627157|ref|YP_819776.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|81820359|sp|Q5M1L6|SYL_STRT1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81820521|sp|Q5M657|SYL_STRT2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122268240|sp|Q03MJ2|SYL_STRTD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|55736303|gb|AAV59945.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738193|gb|AAV61834.1| leucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116100434|gb|ABJ65580.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312277634|gb|ADQ62291.1| Leucyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 833

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|326388332|ref|ZP_08209928.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207064|gb|EGD57885.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 954

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 39/267 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ D      A+ +P DL V G DIL     +W A +    L  
Sbjct: 534 VLDTWFSSALWPFATLGWPDEDAPLLARHYPNDLLVSGFDIL----FFWCARMAMQGLHF 589

Query: 287 PKKV-----FSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+V     + HG +    G+K+SKS GNV+DP+ +I++ G DALR+F+    + G+D  
Sbjct: 590 MKEVPWRRLYLHGLVRAADGQKMSKSKGNVVDPLGLIDKYGADALRFFMCAMESQGRDVK 649

Query: 341 YDKDGLK-------KRVNAD---LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            D+  ++       K  NA     +NGIG   S +  +     +  I   G   E+    
Sbjct: 650 MDERRVEGYRNFATKLWNAARFCQSNGIGASSSLAAPVATSAVNRWI--IGEVVET---- 703

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L+   + + ++R +   Q ++R      +  +  D Y       E  K N D  +    V
Sbjct: 704 LATLDQAMTDLRFDAAAQAVYR-----FAWDTFCDWYI------EFIKGNFDAETKA--V 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
              V+ Q+ ++L  F+P +  +++  L
Sbjct: 751 AGWVLDQILVMLHPFMPFVTEELWHAL 777



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + DV+ R+ RL G D L+  GTD           +AG+ T++ V++     
Sbjct: 114 HIGHALDNTLQDVVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQMEAQ 162

Query: 81  RDMADVLDISYDDFI 95
           +D     + S +DF+
Sbjct: 163 QDKR--TNYSREDFV 175


>gi|325689496|gb|EGD31501.1| leucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 861

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 230

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 231 LLNDLEELDWPESIKDMQR 249


>gi|225848404|ref|YP_002728567.1| valyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644293|gb|ACN99343.1| valyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 973

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 20/237 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P  L + G DI+ F    W A ++         +  H   +H      KGEK+SK+ G
Sbjct: 569 FYPTSLLITGFDIIFF----WVARMIMMGTKFTDNIPFHDVYIHALVRDEKGEKMSKTKG 624

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSV 366
           NVIDP+E+ E+ G DALR+ L    A G+D    +  ++  K  +  + N    +++ S 
Sbjct: 625 NVIDPLEMAEKYGADALRFTLTALAAQGRDIRLSEKRIEGYKHFSNKIWNASKFVLTNSQ 684

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           ++ +KD   +       +  D+ IL+   + +++    ++N   +     +         
Sbjct: 685 NIEVKDVKQL-----NLSTEDKWILTALMKTVKKSSNELENYRYNEYANTIYDFFWHDYC 739

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           D Y +  K   + K + +   T + V   V+R+   LL   +P +  +I+  L + +
Sbjct: 740 DWYIEFTKE-RIYKGSQEEKQTAVSVLNFVLRESLKLLHPIMPFITEEIYQYLPIKE 795



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          K  EK Y    +  PN     HIGHA    + D++ R+ R+ G + L+  G D  G
Sbjct: 27 KTGEKPYFCVVLPPPNVTGSLHIGHALNATLQDIIVRYKRMKGFNTLWLPGFDHAG 82


>gi|222636480|gb|EEE66612.1| hypothetical protein OsJ_23192 [Oryza sativa Japonica Group]
          Length = 960

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 14/146 (9%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +S  + L+ +++ +   ++I  DP  ++  W  +     +T G+ D        F+PA 
Sbjct: 484 ARSAEEALAKAQEKYGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSSEDFKHFYPAT 542

Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +   G DIL F    W A ++      +  +P    V+ HG I   +G K+SK+LGNVID
Sbjct: 543 VLETGHDILFF----WVARMVMMGIEFTGTVPF-SYVYLHGLIRDSEGRKMSKTLGNVID 597

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD 338
           P++ I+E G DALR+ L    A G+D
Sbjct: 598 PLDTIKEYGTDALRFTLSMGTA-GQD 622


>gi|217967945|ref|YP_002353451.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217337044|gb|ACK42837.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 810

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y      YP+   H+GH     I DV+AR++ + G +VL   G D  GQ    AA
Sbjct: 30  DKQKYYTLVMFPYPSGDLHMGHMRNYTIGDVVARYYTMKGYNVLNPMGWDAFGQPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  +N    ++    + + Y  D  +      ++   + ++ K+ ++G  Y
Sbjct: 90  IKNKVHPKEWTYRNIARMKEQLFKMGVVYDWDREVTACAPDYYKWTQWIFLKLYERGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K   + W         N++ +    DG+ +  +  PV+  E E +FF+++ Y + LL+
Sbjct: 150 RKKAPANWCPTCKTVLANEEVI----DGRCWRCK-TPVERREFEQWFFKITEYAEALLN 203



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 42/236 (17%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGE 301
           +KA++W P D +  G +    H +Y        + A       P  K++F+ G +   G+
Sbjct: 519 NKAEYWMPVDQYTGGIEHAILHLLYSRFITKVLYDAGYSPVREPF-KRLFTQGMVYKDGQ 577

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            +SKSLGN++    ++E  G D  R F++       D  +  +G++         G    
Sbjct: 578 IMSKSLGNIVSVDYMVENYGADTARLFILFVAPPEVDIEWSDEGVE---------GANRF 628

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   ++L+D +     P    E ++ I     + ++++ E+++N   + A+A ++ L 
Sbjct: 629 LNRFWRLVLEDAEV---EPKIDEEQEKLIKRKLHKTIKKVTEDIENFKFNTAIAAIMELT 685

Query: 422 S---EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   E  R F     +E                 E IR   +LL  FVP +  +++
Sbjct: 686 NLLFEHKRSFGRTPAFE-----------------EAIRTSILLLSPFVPHITEELW 724


>gi|18312756|ref|NP_559423.1| isoleucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74564220|sp|Q8ZWU4|SYI_PYRAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18160237|gb|AAL63605.1| isoleucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 981

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 22/256 (8%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y+M VW+D+   ++      +N D  + K +P D    G D  R  F+++   + L +  
Sbjct: 527 YVMDVWLDSGIAWIAAVDGENNRDLWE-KLFPYDFVTEGIDQTRGWFYSLLATSVLYTGR 585

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V   G IL K G+K+SKS GNVI   ++ E+ G D +R +++ ++A  +D  +D
Sbjct: 586 APY-KNVLIQGLILDKHGQKMSKSKGNVIWAKDLFEKYGADPVRLYILSKVAPWEDLSFD 644

Query: 343 KDGLKKRVNADLANGIGNLVSRS-VSMILKDYDG-MIPTPGAFT---ESDESILSVCSRV 397
            D + K V  DL N + N+V  +   M L  +D    P         E D+ ILS  + +
Sbjct: 645 PDEV-KYVIGDL-NILWNVVKFADTYMSLDGFDAEKYPLSQWLEKGLEEDKWILSELNIM 702

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFD--AQKPWELKKTNPDR--ASTVLYVT 451
           + E    ++N   H+A A     V E    RY     ++ W  ++ +PD+  A  VL+  
Sbjct: 703 ISEFTNFVKNFEFHKAAALWREFVVETLSHRYIRLLRRRVWS-EEPSPDKYAAYAVLH-- 759

Query: 452 VEVIRQLAILLQAFVP 467
            +V++++ IL    VP
Sbjct: 760 -DVLKKVLILGSILVP 774


>gi|317129810|ref|YP_004096092.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474758|gb|ADU31361.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 880

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 25/264 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++  D+ V G DI+ F    W A ++   L  
Sbjct: 448 VLDTWFSSALWPFSTMGWPNQEAPDFKRYYSTDVLVTGYDIIYF----WVARMIFQGLHF 503

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V  HG +   +G K+SKSLGN +DP++VI++ G DALR+FL    + G+D  
Sbjct: 504 TNERPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDVIDKYGADALRFFLSTGSSPGQDLR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSR 396
           +  + ++   N       GN +  +    L + +G+    I   G  + +D+ IL+    
Sbjct: 564 FYWEKVESNWN------FGNKIWNASRFALMNMEGLKYEEIDLTGKKSIADKWILTRLQD 617

Query: 397 VLQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++    +  +   + RAL   I      D Y +  K   L   + +   T   V   
Sbjct: 618 TITQVTKLIDTYEFGEVGRALYNFI-WDDFCDWYIEMAKL-PLNGDDEEAKLTTRSVLAY 675

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+ Q   LL  F+P +  +++  L
Sbjct: 676 VLDQTMRLLHPFMPFITEEVWQYL 699



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 26/175 (14%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           E +K Y +  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     
Sbjct: 37  ENKKPY-TIVIPPPNVTGKLHLGHAWDTTLQDILIRVKRMQGYDALWLPGMDHAGIATQA 95

Query: 57  KIAKAAQNAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEK 100
           K+    +  GV+      + F++++            + +  +   LD S + F  T ++
Sbjct: 96  KVEGKLREEGVSRYDLGREKFIEKSWEWKEEYAETIRQQWSKLGLSLDYSRERF--TLDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
              D  + ++ ++ ++G IY+G Y   W      A  + + +YK   G +Y+ ++
Sbjct: 154 GLSDAVKEVFVRLYEEGLIYRGEYIINWDPQTKTALSDIEVIYKDVQGAFYHMKY 208


>gi|239813441|ref|YP_002942351.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511553|sp|C5CJ85|SYL_VARPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|239800018|gb|ACS17085.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 876

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 6/180 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I D+L R+ R+ G +VL   G D  G     AA 
Sbjct: 32  RKKYYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    R    A  L I +   I T +  ++   + L+ K+ +KG  Y+
Sbjct: 92  KNGVPPAKWTYENIDYMRGQLQAMGLAIDWSREIATCDPSYYKWNQWLFLKMLEKGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +      V+  E  GY+ ++S Y ++LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGKGWRTGAT-VERREIPGYYLKISDYAEELLEHTQ 207


>gi|225860574|ref|YP_002742083.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229933|ref|ZP_06963614.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255643|ref|ZP_06979229.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502363|ref|YP_003724303.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|225728073|gb|ACO23924.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237958|gb|ADI69089.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390309|gb|EGE88650.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 883

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|325695108|gb|EGD37010.1| valine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 881

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++  +L  
Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 497

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G DALR+FL    A G+D  
Sbjct: 498 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGADALRWFLSNGSAPGQDVR 557

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 558 FSYEKMDASWN--FINKIWN-ISRYILM 582



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 99  EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 157 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 204


>gi|269302989|gb|ACZ33089.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 1043

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   ++  F PAD    G D  R    ++   ++SA L
Sbjct: 513 YVFDCWFDSGAMPYAQNHYPFENQKETEEAF-PADFIAEGLDQTR--GWFYTLTVISAIL 569

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  +    +G IL + G K+SK L N   P  V++  G DALR +L+  +    +  
Sbjct: 570 FDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDL 629

Query: 340 -FYDK--DGLKKRVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            F DK  +G+ K++   L + +   N  +       K  D       A+TE D+ ILS  
Sbjct: 630 RFSDKGIEGVLKQILLPLTSVLSFFNTYAELYGFDPKSQD----IEPAYTEIDQWILSNL 685

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLY 449
             V+ ++RE+M    ++ A+   ++ + ++  ++     ++ WE + T PDR  A + LY
Sbjct: 686 YSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWEAENT-PDRRAAFSTLY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 745 ---EVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782


>gi|225620247|ref|YP_002721504.1| isoleucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782370|sp|C0R112|SYI_BRAHW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225215066|gb|ACN83800.1| isoleucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 923

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 8/114 (7%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFL 279
           D  Q I+ VW D+  +         + DG     +P D+++ G D  R  F A  WP+  
Sbjct: 524 DKEQDILDVWFDSGVSSFAAQKTNKDLDG----VFPVDIYLEGGDQYRGWFQAAIWPSMA 579

Query: 280 LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   +P  K++ +HG+ L  +G  + KS GNV+ P+EVI++ G D LR + + E
Sbjct: 580 IRG-IPPYKELVTHGWTLDEQGRAMHKSAGNVVSPLEVIDKYGADILRLWCISE 632



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-----GVTT 69
           Y N   HIG +   II D++ R+    G D  +  G D HG  I    Q +       T+
Sbjct: 58  YANGDIHIGTSLNKIIKDIIVRYKSAKGFDSPYVPGWDCHGMPIELKVQESLGDKYKETS 117

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKG 117
           K  + +  R +      +DI   +F R            T    +      ++ ++ +KG
Sbjct: 118 KFIMRKKCRAY--AQKYIDIQRKEFKRLGVMGDWENPYLTMSPEYESEIVEVFAQLVEKG 175

Query: 118 DIYKG 122
            IYKG
Sbjct: 176 YIYKG 180


>gi|148983947|ref|ZP_01817266.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147924094|gb|EDK75206.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799625|emb|CBW32180.1| valyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 883

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VIE+ G DALR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILM 583



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|159037752|ref|YP_001537005.1| methionine--tRNA ligase [Salinispora arenicola CNS-205]
 gi|157916587|gb|ABV98014.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 536

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 152/405 (37%), Gaps = 51/405 (12%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I  A   PN   H+GH A   + ADV AR  R+ G  V++TT TD+    +   A+  GV
Sbjct: 11  IIAATPTPNGDLHLGHLAGPYLAADVYARHLRMSGRPVVYTTCTDDSQSYVLTTARRQGV 70

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK----------RHHDTCRILWKKIS--- 114
             +      +       D + IS      T +           + H   R   +++    
Sbjct: 71  PPRRLAATAATAIARSLDAVGISTAGLPPTGDTYRGTVLDFVGQLHAAGRFRQRRVRLPY 130

Query: 115 ---DKGDIYKGCYSGW--YSLRD------EAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                  +Y G  SG     L D      EA  + +      D +Y     +PV+    +
Sbjct: 131 ARHAGMYLYDGLLSGTCPTCLSDSSGGVCEACGHPNTFDDLLDPRYSLDPDDPVEPRVAD 190

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                   Y+ +L  YY  H     P  RR  NE+++     L D+ ++     WGI  P
Sbjct: 191 VLVLPAEDYRGRLAEYYARHTPRWRPHARRLVNELLA---RPLPDIPVTVPG-SWGIPAP 246

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAI-- 273
               P  ++Y WI+A+   + +T +  +P G+        W A+      +++ FH    
Sbjct: 247 FAQTPGQVLYPWIEAMPASIYSTWWSRSPRGATGGNIDAPWRAETDT---ELVYFHGYDN 303

Query: 274 --YWPAFLLSANLP------LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
             +W    L   L       LP     + F    G K S S  +++   EV+ EV  D L
Sbjct: 304 VYHWGLVDLVLLLAHGDRYVLPAANVCNEFYELAGAKFSTSRDHLVHAPEVLAEVPRDLL 363

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           R++L       +   +D+  L       L     N +SR++   L
Sbjct: 364 RFYLALTAPEYQRSTFDRAALPSVTQTRLVEPW-NRLSRALDRAL 407


>gi|319409844|emb|CBY90153.1| isoleucyl-tRNA synthetase (isoleucine-tRNA ligase; IleRS)
           [Neisseria meningitidis WUE 2594]
          Length = 929

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  D      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELD------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 391 LSVCSRVL-QEIRENMQNQ-----LIHRALAQVISLVSE----------VDRYFDAQKPW 434
           +   S VL ++++E +          H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYSVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 HARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|319899419|ref|YP_004159516.1| Leucyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403387|emb|CBI76951.1| Leucyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 874

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 8/182 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EREK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 32  EREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V  KV+  +N    R     L  S D   +F  T +  ++   ++L+     KG I
Sbjct: 92  VQNNVHPKVWTYENITVMRKQLKQLGFSLDWSREFA-TCDVEYYHRQQMLFLDFYQKGLI 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V  G  G    A    V+  E   +FF++S + D LL+ 
Sbjct: 151 SRKVAKVNWDPVDQTVLANEQVVDGC-GWRSGAL---VEQRELTQWFFKISDFSDDLLAG 206

Query: 180 YE 181
            E
Sbjct: 207 LE 208



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 24/207 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
           + I YV +D     L T G + +      + W  PAD+ V+ KD  R       A+ L+ 
Sbjct: 568 KMIGYVSVDEPFKGLFTQGMVVHETYRDDQGWVSPADIVVVEKDGRRC------AYKLTD 621

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
              +         ++   EK+SKS  NVIDP ++I   G D +R+F++ +    +D  + 
Sbjct: 622 RSEV---------MIGSIEKMSKSKKNVIDPDDIIASYGADTIRWFMLSDSPPERDVIWT 672

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G++          +  LV+ S   +LK+        GA  E  ++      R L  + 
Sbjct: 673 ESGIEG--AHRFVQRVWRLVALSAP-VLKEITPCAGQKGAALELSKA----AHRTLCAVG 725

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFD 429
           ++++    +RA+A++  L++ ++ + +
Sbjct: 726 DDLEKLAFNRAIARLYELLNVMNSFLN 752


>gi|306830390|ref|ZP_07463560.1| leucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427415|gb|EFM30517.1| leucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 837

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 34  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 94  AMDTGNDPAEFTAQNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 153

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 154 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 207

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 208 LEDLEDLDWPESIKDMQR 225


>gi|304314921|ref|YP_003850068.1| valyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588380|gb|ADL58755.1| valyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 876

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 28/216 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+  + L+  G+   PD S    +PA+L   G DI+R  A Y       L+   
Sbjct: 454 VLDTWMDSSISPLSVAGW---PDESYRDLFPANLRPQGHDIIRTWAFYTILRCMALTGEK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG------KD 338
           P  + V +       G K+SKS GNVI P EV+E+ G DALR +    +         KD
Sbjct: 511 PFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADALRLWAAGSVPGSDVPFAWKD 570

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y    L+K  NA           R +S+ L D          F   D  ILS    ++
Sbjct: 571 VKYGYKFLRKFWNA----------FRFISIHLGD-----DREAEFRPLDRWILSRLMNLV 615

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
           +++ E+++      A+ ++   V     D Y +A K
Sbjct: 616 RDVTESLEEYNFAAAVGRIQKFVWHDFCDEYIEAVK 651



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + +  I T   YP    H+GH    +  D++ARF R+ G DVLF  G D HG
Sbjct: 36 KPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFRRMRGFDVLFPQGWDCHG 87


>gi|109897887|ref|YP_661142.1| leucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123171408|sp|Q15VK0|SYL_PSEA6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109700168|gb|ABG40088.1| leucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 870

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 14/242 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK Y  +   YP+ + H+GH     I DV++RF R++G +VL   G D  G     A
Sbjct: 31  EDKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRMNGKNVLQPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  QN    ++    L   Y  D  + T +K ++   +  + ++ +KG +
Sbjct: 91  ALNNNTAPAKWTYQNIDYMKNQLKSLGFGYDWDREVATCKKDYYRWEQWFFTRLYEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           YK   +  +   D     +++V    DG+ + +    V+  E   +F +++ Y ++LL+ 
Sbjct: 151 YKKNSTVNWDPVDHTVLANEQVI---DGRGWRS-GALVEQKEIPQWFIKITDYAEELLTD 206

Query: 179 --YYESHPEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               E  PE +  +++    R+E +  +   L + +    +FD     PD    + YV +
Sbjct: 207 LEQLEDWPEQVRAMQKNWIGRSEGVD-ITFNLSENAADISSFDVYTTRPDTLYGVTYVAV 265

Query: 233 DA 234
            A
Sbjct: 266 AA 267



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 67/326 (20%), Positives = 127/326 (38%), Gaps = 53/326 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR----KTFD 215
           ME   Y+ R  + Q++      +   + LP+   ++ +  ++  +  L  SR       D
Sbjct: 500 MESSWYYARYCSAQNQDAMLDPTQANYWLPV---DQYVGGIEHAILHLLYSRFFHKLLRD 556

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            G+   D+P    Y  +      L  + + ++  G K  F PAD+  +  +  R      
Sbjct: 557 EGLVNSDEP----YKRLLCQGMVLADSFFREDESGKKEWFSPADVDTVKDEKGR------ 606

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV----- 330
              +  A L    K   HG +     K+SKS  N IDP  VI+  G D +R F +     
Sbjct: 607 ---ITQATLKADGKPVEHGGMT----KMSKSKNNGIDPQHVIDLYGADTIRVFTMFAAPP 659

Query: 331 -REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            + +     G    +   KRV     + I  L   +   I K          A T   ++
Sbjct: 660 EQTLEWVDSGVEGANRFIKRVWKLTQDHIDALDGDTAPAIDKT---------ALTGDQKT 710

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +     R + ++ +++ + Q  + A+A ++ L++ + R          + T+ D+A    
Sbjct: 711 LRRAVHRTIAKVTDDVGRRQTFNTAVAAIMELLNSLQR--------APQSTDQDKA---- 758

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
            V  E I  + +LL    P + + ++
Sbjct: 759 -VLREAIESVVLLLNPIAPHMCHILW 783


>gi|221484634|gb|EEE22928.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 1770

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 6/71 (8%)

Query: 228  MYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL 284
            +YVW DA+  YLT  G+   PD +  +F   WP  L V+GKDILRFH +  PA LL   L
Sbjct: 1122 VYVWFDAVVGYLTAAGF---PDVNSRRFRALWPPSLQVLGKDILRFHGVLLPALLLGVGL 1178

Query: 285  PLPKKVFSHGF 295
            PLP+++  HG+
Sbjct: 1179 PLPRRLLVHGW 1189


>gi|114571496|ref|YP_758176.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122314962|sp|Q0AKF5|SYL_MARMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114341958|gb|ABI67238.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 865

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 6/180 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH+    + DV+AR+ R  G DVL   G D  G     AA+
Sbjct: 34  KPKYYVLEMFPYPSGRIHVGHSRNYTMGDVVARYKRARGFDVLHPMGWDAFGLPAENAAR 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + GV    +   N    R     L ++ D    I T +  ++   + ++ ++ ++G +++
Sbjct: 94  DRGVHPGAWTHDNIDAMRGQLQRLGLALDWSREIATCDPSYYRHQQAIFLRLMERGLLHR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    VQ  E + +FF+++ Y D+L    E
Sbjct: 154 KTAKVNWDPVDQTVLANEQVI---DGRGWRSGALVVQ-RELDQWFFKITEYADELTDALE 209



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 31/183 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+D    IE  G DA+R+F++ +    +D  Y   G++         G+  
Sbjct: 624 EKMSKSKKNVVDLDAFIESYGADAVRWFVLSDSPPERDVEYTDSGVE---------GVWR 674

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES------ILSVCSRVLQEIRENMQNQLIHRAL 414
            V R  S +    +G    PG  T + ++      I     + L  + + ++    + A+
Sbjct: 675 FVQRLWSTVTSLPEG---APGPLTVAADASGPALEIRRAAHKALHAVTDAIEGFRFNSAV 731

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           AQV  LV+ + +Y  +       KT             E +  LA ++  FVP LA + +
Sbjct: 732 AQVHDLVNVLRKYVPSDDAGIAAKT-------------EALGILARIIAPFVPHLAEECW 778

Query: 475 DIL 477
           + L
Sbjct: 779 EHL 781


>gi|324503322|gb|ADY41446.1| Valyl-tRNA synthetase [Ascaris suum]
          Length = 832

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 152/420 (36%), Gaps = 83/420 (19%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LR+   Y  +    G      +   + V+ M +E +F R     D +L    +    I P
Sbjct: 382 LREIGAYGGESSCSGGQIPMCSRTGDIVEPMMKEQWFLRCDEINDAILDAVNTAKLHITP 441

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL----------TNYL 239
              R ++  ++ S  +   LSR+   WG +IP         WI A           T   
Sbjct: 442 DFLRTKLEEWL-SNKEPWCLSRQLL-WGHRIPAYRIANSNKWIAATSDEDARRIFGTEVK 499

Query: 240 TTTGYLDNPDGSKAKF-----------WPA--------DLHVIGKDILRFHAIYWPA--- 277
            + G + + D     F           WP          L   G DI+ F    W A   
Sbjct: 500 NSAGIMQDEDVLDTWFSSSLVPLVVAGWPEKRLNSSPLSLMETGHDIVGF----WVARML 555

Query: 278 ---FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV--- 330
              + LS  +P    V  HG +    G K+SKSLGNVIDP++VI+ + +D +   L    
Sbjct: 556 TVCYRLSGCIPF-THVLLHGLVRDSAGRKMSKSLGNVIDPVDVIDGISIDDMIGRLKESS 614

Query: 331 -----REIA--------------CGKDGF------YDKDGLKKRVNAD--------LANG 357
                +E+A              CG D        YD   L   VN            N 
Sbjct: 615 LPDSEKEVASSNLRTMYPNGVTRCGPDALRFALLRYDLTALDINVNISETALEGLRFCNK 674

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + NL + + S+  K   G   +  +   +D  I S  S  LQ +   +    +H A A +
Sbjct: 675 LWNLCAYAKSLWSKAQSGT-ESRKSIHPADRWIKSCLSNSLQAMNMRIDEGNVHLAFASI 733

Query: 418 --ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               L    D Y +  K   L      R + +  V  EVI +  I L  F+P ++  +F+
Sbjct: 734 HKFILADLCDVYLETTKK-ALWNNEEKRINEIAVVLREVIEKSLIALSVFMPFVSEYLFE 792


>gi|311031241|ref|ZP_07709331.1| leucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 805

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 9/180 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +EK Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KGKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGQNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F +QN   FR     L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTEQNINTFRRQIKSLGFSYDWDREVNTTDPEYYKWTQWIFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+      +  R++ Y D+LL
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMRQWILRITEYADRLL 202



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 31/191 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILH-K 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKEWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGVN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P  ++E  G D LR +      L   IA   +G    DG ++ ++  
Sbjct: 574 NEKMSKSKGNVVNPDHIVESHGADTLRLYEMFMGPLEASIAWSTNGL---DGSRRFLD-- 628

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                       V  +  + +G + +  A    ++++       ++++ E+ +    + A
Sbjct: 629 -----------RVWRLFVEENGKLSSKVAEVTEEDTLEKTYHATVKKVTEDYEGLRFNTA 677

Query: 414 LAQVISLVSEV 424
           ++Q++  ++E 
Sbjct: 678 ISQMMVFINEA 688


>gi|273067912|gb|ACZ97545.1| methionyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 254

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 4/156 (2%)

Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K  DG ++    A T+ D  +    S V+ E +E M       ALA +
Sbjct: 1   GNLLNRTVAMINKYQDGRLVGNNTATTDFDADLEQTASDVIAEYKELMDKTRFAEALAAI 60

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             LVS  ++Y D  +PW L K +  +   S V+    + +R +A L+Q  +P   ++I  
Sbjct: 61  WKLVSRANKYIDETEPWVLAKDDSKKETLSDVMTHLAKSLRVIAALIQPIMPNAPHQIAQ 120

Query: 476 ILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
            L +   +     L     P    +     PIFPR 
Sbjct: 121 QLGIEGTDLSLVDLQFNDFPAEAQVVAKGTPIFPRL 156


>gi|329943023|ref|ZP_08291797.1| valyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848179|emb|CBY17180.1| valyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506993|gb|ADZ18631.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814570|gb|EGF84560.1| valyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914857|gb|AEB55690.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 940

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 94/243 (38%), Gaps = 75/243 (30%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +S+V + L+D  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLREFISSDAIKIFPPEFTKNYLSWVNN-LRDWCISRQLW-WGHRIPVWY 420

Query: 222 ---------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
                                 DP+       ++  W  +    LT  G+ DN  G   K
Sbjct: 421 HKSDANRMLCYDGEGIPEEVAKDPESWDQDPDVLDTWFSSGLWPLTCLGWPDNESGDLEK 480

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHKG----------- 300
           F+P  + + G DIL F  +     L SA +   P    VF HG I  K            
Sbjct: 481 FYPTAVLITGHDIL-FFWVTRMVLLCSAMVGEKPF-SDVFLHGLIFGKSYKRYNDLGEWT 538

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS GNVIDP+E+I + G DA+R  L    +C 
Sbjct: 539 YITGEEKYAYDMGKALPKDVIAKWEKLSKSKGNVIDPLEMIAKYGADAVRMALC---SCA 595

Query: 337 KDG 339
             G
Sbjct: 596 NRG 598



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 24/164 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT--KVFVDQNSR 78
           H+GHA    + DVL R+ R+ G +V +  GTD  G       +    ++  K  VD +  
Sbjct: 54  HMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTVVERHLYSSLGKRRVDFSRE 113

Query: 79  NF-------------------RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            F                   R +    D S   F  T E   +   +  +K + DKG I
Sbjct: 114 EFLEHVWQWKEKSEGVILSQLRQLGCSCDWSRLRF--TMEPLANRAVKKAFKILFDKGHI 171

Query: 120 YKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           Y+G Y   W  +   A  +D+  Y+  DG  Y  ++  V   E+
Sbjct: 172 YRGNYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRVVDSSED 215


>gi|284928619|ref|YP_003421141.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809078|gb|ADB94783.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 868

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K Y  +   YP+   H+GH    +I DV+ARF RL G  VL   G D  G     AA
Sbjct: 41  EKQKFYALSMFPYPSGNLHMGHVRNYVITDVIARFKRLQGYSVLHPMGWDAFGLPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            + G++ + +  +N    R     L +S D
Sbjct: 101 IDRGISPEEWTKKNIAKMRQQLQSLGLSID 130



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 30/181 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP EV+E+ G D  R F++ +    KD  +    ++ +          N
Sbjct: 627 EKMSKSKYNGVDPQEVLEKYGADTARMFILFKAPPEKDLEWSSSDVEGQFR------FLN 680

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE----SILSVCSRVLQEIRENMQNQLIHRALAQ 416
            V R V + +++ +    +    T++++    SI ++   V Q++ EN Q    + A+A+
Sbjct: 681 RVWRLVHLYIQNKNNKTQS-KTLTKNEKDLKRSIHTIIKEVSQDLEENYQ---FNTAIAE 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L + ++ + D                    V  E I  L  LL  F P ++ +++  
Sbjct: 737 LMKLSNVLNDFKDINSS----------------VYQEGIVALLTLLSPFAPHISEELWHS 780

Query: 477 L 477
           L
Sbjct: 781 L 781


>gi|221504824|gb|EEE30489.1| hypothetical protein TGVEG_033520 [Toxoplasma gondii VEG]
          Length = 1768

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 6/71 (8%)

Query: 228  MYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL 284
            +YVW DA+  YLT  G+   PD +  +F   WP  L V+GKDILRFH +  PA LL   L
Sbjct: 1120 VYVWFDAVVGYLTAAGF---PDVNSRRFRALWPPSLQVLGKDILRFHGVLLPALLLGVGL 1176

Query: 285  PLPKKVFSHGF 295
            PLP+++  HG+
Sbjct: 1177 PLPRRLLVHGW 1187


>gi|56964386|ref|YP_176117.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822070|sp|Q5WEQ4|SYV_BACSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56910629|dbj|BAD65156.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 880

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 17/260 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P ++ V G DI+ F    + +     +   
Sbjct: 448 VLDTWFSSALWPFSTMGWPDEEAPDYKRYYPTNVLVTGYDIIAFWVSRMIFQGKAFTGQR 507

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG I   +G K+SKSLGN +DP EVI++ G D+LR+FL      G D  +  
Sbjct: 508 PF-KDVLIHGLIRDAEGRKMSKSLGNGVDPQEVIDKYGADSLRFFLATGSTPGNDLRFYW 566

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
           + ++   N       GN +  +    L + DG     I      + +D+ IL+     ++
Sbjct: 567 EKVESTWN------FGNKIWNASRFALMNMDGFSYSDIDINQEKSIADKWILTRLQETVE 620

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +   +       A   + S + +   D Y +  K   L   N         V   V+ Q
Sbjct: 621 SVTRLIDAYEFGEAGRVLYSFIWDDVCDWYIEMAKL-ALYGENEQAKQATRSVLAHVLDQ 679

Query: 458 LAILLQAFVPKLANKIFDIL 477
              +L  F+P +  +I+  L
Sbjct: 680 TMRMLHPFMPFITEEIWQHL 699



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  I D+LAR  R+ G D L+  G D  G     K+    +
Sbjct: 42  SIVIPPPNVTGKLHLGHAWDATIQDILARTKRMQGYDTLWLPGMDHAGIATQAKVEGKLR 101

Query: 64  NAGVTT-----KVFV-------DQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
             G++      + F+       D+ ++  R+    + IS  D+ R   T ++   D  + 
Sbjct: 102 EQGISKYDLGREAFLEKSWEWKDEYAKFIREQWAKVGISV-DYSRERFTLDQGLSDAVKE 160

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++  + +KG IY+G Y   W      A  + + +YK   G +Y+  +
Sbjct: 161 VFVSLYNKGLIYRGEYIINWDPQTKTALSDIEVIYKDVQGAFYHMSY 207


>gi|296087129|emb|CBI33503.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 49/216 (22%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   +     I+P ER  ++ +   S +KD  +SR+ + WG +IP   
Sbjct: 108 WFVTMEPLAEKALQAVQRGELTIMP-ERFEKIYNHWLSNIKDWCISRQLW-WGHRIPVWY 165

Query: 222 -----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNP 248
                 + +YI+                              W  +     +T G+ D  
Sbjct: 166 IVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVS 225

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEK 302
                KF+P  +   G DIL F    W A ++   +     V     + HG I   +G K
Sbjct: 226 TQDFKKFYPTTVLETGHDILFF----WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRK 281

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 282 MSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 316


>gi|256044614|ref|ZP_05447518.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265991040|ref|ZP_06103597.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263001824|gb|EEZ14399.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 434

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL     +W A ++   L
Sbjct: 2   VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDIL----FFWVARMMMMGL 54

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 55  HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 114


>gi|183221665|ref|YP_001839661.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911741|ref|YP_001963296.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|254782416|sp|B0SBW4|SYI_LEPBA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782417|sp|B0STE5|SYI_LEPBP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167776417|gb|ABZ94718.1| Isoleucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780087|gb|ABZ98385.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase; IleRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 915

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 43/269 (15%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +  WP+  +    P  K V +HG++L  KG  +SKSLGNVI+P
Sbjct: 551 PADLYLEGSDQHRGWFQSSLWPSMAIRKTPPY-KSVLTHGYVLDEKGHAMSKSLGNVINP 609

Query: 314 -IEVIEEVGVDALRYFLVRE-----IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             ++I + G D LR ++  +     +  GKD         +++       +GN  + +++
Sbjct: 610 TTDIINQYGADILRLWVSTQDFRDDVKIGKDSIKTVSEAYRKIRNTFRYLLGNTSAETLT 669

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS----- 422
             LK  +            D+  L   +++  E+++       H+   +++   +     
Sbjct: 670 WNLKKEE--------LDTIDKYYLHKLAKLNDEVKKLYDTYQFHQVYHKILGFCTVDLSQ 721

Query: 423 ---EVDR---YFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIF- 474
              E+ R   Y DA      K++   R+S   L V +EV+ +L   + +F  +     F 
Sbjct: 722 DYFEIIRDRMYCDA------KESKTRRSSEYTLAVILEVLSKLLAPILSFTTEEVWTSFG 775

Query: 475 --DILFVADENRCF----QSLDQRLKPGF 497
             D +F +D +       +SL+ ++KP F
Sbjct: 776 KKDSVFYSDFSDLTEWLDESLESKMKPVF 804


>gi|15674378|ref|NP_268552.1| leucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|32171582|sp|Q9A1P0|SYL_STRP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13621467|gb|AAK33273.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 833

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G ++L   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNILHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|218199135|gb|EEC81562.1| hypothetical protein OsI_25003 [Oryza sativa Indica Group]
          Length = 958

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 14/146 (9%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +S  + L+ +++ +   ++I  DP  ++  W  +     +T G+ D        F+PA 
Sbjct: 482 ARSAEEALAKAQEKYGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSSEDFKHFYPAT 540

Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +   G DIL F    W A ++      +  +P    V+ HG I   +G K+SK+LGNVID
Sbjct: 541 VLETGHDILFF----WVARMVMMGIEFTGTVPF-SYVYLHGLIRDSEGRKMSKTLGNVID 595

Query: 313 PIEVIEEVGVDALRYFLVREIACGKD 338
           P++ I+E G DALR+ L    A G+D
Sbjct: 596 PLDTIKEYGTDALRFTLSMGTA-GQD 620


>gi|158522449|ref|YP_001530319.1| leucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158511275|gb|ABW68242.1| leucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 865

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 12/187 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+  + G +VL   G D  G     AA
Sbjct: 34  KKEKYYLFEMFPYPSGRIHMGHVRNYTIGDVVARYKMMKGFNVLHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     + +SY  D  I T +  ++   + L+ K+ +KG  Y
Sbjct: 94  IANNTHPARWTRENIAYMRAQLKRMGLSYDWDREIATCDPDYYRWEQWLFVKMYEKGMAY 153

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177
            K  +  W         N ++V  GA  +  +A  Q    QW      FFR++ Y + LL
Sbjct: 154 RKDAFVNWCDTCATVLAN-EQVEAGACWRCGHAVRQKKLAQW------FFRITDYAEDLL 206

Query: 178 SYYESHP 184
            Y +  P
Sbjct: 207 VYCDQLP 213


>gi|258424172|ref|ZP_05687054.1| leucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845793|gb|EEV69825.1| leucyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 805

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P E+++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDEIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TSNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|154253446|ref|YP_001414270.1| valyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157396|gb|ABS64613.1| valyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 909

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 23/259 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++  D+ V G DI+ F    W A ++   L  
Sbjct: 476 VLDTWFSSGLWPFSTLGWPDKTP-ELARYYKTDVLVTGFDIIFF----WVARMMMMGLHF 530

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++V  H   +H      KG+K+SK+ GNVIDP+++I+E G DALR+ L    A G+D  
Sbjct: 531 MQEVPFHTVYIHALVRDEKGQKMSKTKGNVIDPLKLIDEYGADALRFTLAAMAAQGRDIK 590

Query: 341 YDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRV 397
                ++  +     L N        +    ++ +D     P   +++ ++ I+   +R 
Sbjct: 591 LATSRVEGYRNFGTKLWNA-ARFCEMNECARVEGFD-----PAKLSQTVNKWIVGEVART 644

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             EI E ++    + A       V  V  D Y +  KP  L   N +  +        V+
Sbjct: 645 AAEITEAIEAYRFNDAANAAYKFVWNVFCDWYLEFIKPL-LMGDNEEAKAETRATAAWVL 703

Query: 456 RQLAILLQAFVPKLANKIF 474
            Q+ ++L  F+P +  +++
Sbjct: 704 DQILLMLHPFMPFVTEELW 722



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + DVL RF R+ G DVL+  G D           +AG+ T++ V++ 
Sbjct: 54 HMGHALNNTLQDVLIRFERMRGKDVLWQPGLD-----------HAGIATQMIVERQ 98


>gi|310830393|ref|YP_003965494.1| Valyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309249860|gb|ADO59426.1| Valyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 888

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 8/148 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ +  +  K +++P ++ V G DI+ F    + + A   +  +
Sbjct: 457 VLDTWFSSALWPFSTLGWPEQTEDLK-RYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEI 515

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HG +    G K+SKSLGN +DP++VI++ G DA+RY +      G+D  +  
Sbjct: 516 PF-KDVLMHGLVRDADGRKMSKSLGNGVDPLDVIDQYGTDAMRYMISTSSTPGQDLRFRW 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILK 371
           + +++  N   AN I N  SR   M L+
Sbjct: 575 ERVEQARN--FANKIWN-ASRFALMNLE 599



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGHA +  + D++ R  R+ G D L+  G D  G     K+ +  +  G+T        
Sbjct: 60  HIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREK 119

Query: 69  --------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                     +++D     +  M   LD S + F  T ++      R ++ K+  KG IY
Sbjct: 120 FLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERF--TLDEGLSKAVREVFVKLYQKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G     +        +D EV YK  +G  Y+ Q+
Sbjct: 178 RGKRIINWDPAARTALSDIEVEYKEVNGNLYHLQY 212


>gi|301336474|ref|ZP_07224676.1| isoleucyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 1036

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 24/268 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A+F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEARF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G +L + G K+SK L N   P ++++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIVLAEDGNKMSKRLNNYPSPKKIMDTYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +     T     E D  ILS    
Sbjct: 628 RFSDKGVEAVLKQVLLPLSNALAFYKTYAE---LYGFSPNETTDLELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           ++ + RENM    +H A++  I  + ++  ++     ++ WE  + +PDR  A   LY  
Sbjct: 685 LVGKTRENMAQYDLHAAVSPFIDFIEDLTNWYIRRSRRRFWE-SEDSPDRRAAFATLY-- 741

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFV 479
            EV+   + ++  F+P  A  ++  L V
Sbjct: 742 -EVLMVFSKIIAPFIPFTAEDMYQQLRV 768


>gi|119503290|ref|ZP_01625374.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119460936|gb|EAW42027.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 920

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 71/302 (23%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+  N     +KF PA + V G DI+ F    W A ++  +L  
Sbjct: 446 VLDTWFSSALWTFSTLGW-PNKTPEMSKFHPASVLVTGFDIIFF----WVARMIMMSLHF 500

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEV-------------------- 320
             +V  H   +H      +G+K+SKS GNVIDPI++I+ +                    
Sbjct: 501 CDEVPFHTVYVHGLVRDGEGQKMSKSKGNVIDPIDLIDGIDLESLVAKRTGGMMQPQMAA 560

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G+D  +D   ++   N    N + N   
Sbjct: 561 RIAKQTRKHFPEGIQGYGTDALRFTFYSLASTGRDIKFDMHRMEGYRN--FCNKLWN--- 615

Query: 364 RSVSMILKDYDGMIPTPGAFTES--DESILSV-------CSRVLQEIRENMQNQLIHRAL 414
            +   +L + +G+  +P     S  D  ILS        C + +++ R ++ +Q ++  +
Sbjct: 616 -AARYVLGNCEGLATSPAHAEPSLADRWILSRLASAAKDCEQAIEQYRFDLASQALYDFV 674

Query: 415 AQVISLVSEVDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                     D Y +  KP  W+ ++ NPD+A    +  V V+  +  LL   +P +  +
Sbjct: 675 WNEF-----CDWYLELSKPILWD-EEANPDQAMVTRHTLVRVLENILRLLHPMMPFITEE 728

Query: 473 IF 474
           I+
Sbjct: 729 IW 730



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 24/135 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKI 58
           S  I  PN     H+GH ++  I D L R+ R+ G D L+  GTD  G         Q  
Sbjct: 34  SIPIPPPNVTGSLHMGHGFQQAIMDALIRYQRMKGADTLWQVGTDHAGIATQMLVERQLE 93

Query: 59  AKAAQNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           A+  +   +    F+++            +R  R +    D S + F  T ++   +  +
Sbjct: 94  AEGIKREDIGRDAFIEKVWEWKEQSGGTITRQLRRLGASADWSRERF--TMDEGLSEAVQ 151

Query: 108 ILWKKISDKGDIYKG 122
            ++ ++ D+G IY+G
Sbjct: 152 QVFIQLYDQGLIYRG 166


>gi|46447288|ref|YP_008653.1| valyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81626581|sp|Q6MAM1|SYV_PARUW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46400929|emb|CAF24378.1| probable valyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 949

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 162/398 (40%), Gaps = 95/398 (23%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++  +  KL    ++    ++P    +    ++   L+D  +SR+ + WG +IP   
Sbjct: 361 WFVKMDGFSKKLREVVQNGQVKLIPSHWESTYFHWI-DNLRDWCISRQLW-WGHRIPIWY 418

Query: 222 ---DDPQYIMYV--------------WI---DALTNYLTTTGY----LDNPDGSK--AKF 255
              D  + I Y               WI   D L  + ++  +    L  P+ +   AKF
Sbjct: 419 HKEDSNRLICYAGSDLPDEVKNAPEEWIQDSDVLDTWFSSALWPFSTLGWPEQTSELAKF 478

Query: 256 WPADLHVIGKDILRF----------HAIYWPAF----------------------LLSAN 283
           +P  + V G DIL F          +A+  P F                      +L  N
Sbjct: 479 YPTSVLVTGHDILFFWVARMILMGDYALDQPPFPETYLLGLIYGKSYWRQESNGGILYVN 538

Query: 284 ----------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV--- 330
                      P+PK+VFS      K EK+SKS GN+IDP+E+I++ G DA+R  L    
Sbjct: 539 EQERSDFDMGKPIPKEVFS------KWEKMSKSKGNIIDPLEMIDQFGTDAVRMALCASA 592

Query: 331 ---REIACGKDGFYD-KDGLKKRVNAD---LANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
              R+I   +  F + K+   K  N     L N  GN  +R++S+  + +   +     F
Sbjct: 593 TQARQIDLDRRRFEEFKNFTNKIWNGARFVLMNLDGNEQNRTMSLTSQGFSQGL-DEALF 651

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK--T 439
           T  D  ILSV +R ++ +  ++ +    +A  +      +     Y +  KP    K  T
Sbjct: 652 TLEDRWILSVLNRTVESVNVHLNHYQFDQAAIEAYDFFWKEFCAYYVEIAKPILFGKIGT 711

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +R +    + + V+ Q   L+    P +  ++F IL
Sbjct: 712 AQERTNKQKLLVI-VLCQAIRLIHPMAPFITEELFHIL 748


>gi|15834908|ref|NP_296667.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285078|ref|ZP_06194472.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289102|ref|ZP_06195404.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|13878793|sp|Q9PL20|SYI_CHLMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7190330|gb|AAF39156.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 1036

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 24/268 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A+F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEARF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G +L + G K+SK L N   P ++++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIVLAEDGNKMSKRLNNYPSPKKIMDTYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +     T     E D  ILS    
Sbjct: 628 RFSDKGVEAVLKQVLLPLSNALAFYKTYAE---LYGFSPNETTDLELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           ++ + RENM    +H A++  I  + ++  ++     ++ WE  + +PDR  A   LY  
Sbjct: 685 LVGKTRENMAQYDLHAAVSPFIDFIEDLTNWYIRRSRRRFWE-SEDSPDRRAAFATLY-- 741

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFV 479
            EV+   + ++  F+P  A  ++  L V
Sbjct: 742 -EVLMVFSKIIAPFIPFTAEDMYQQLRV 768


>gi|262374478|ref|ZP_06067752.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310474|gb|EEY91564.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 945

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 31/175 (17%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K + +HGF++  KG K+SKSLGN+I P
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSIAINERAPY-KGLLTHGFVVDEKGRKMSKSLGNIITP 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFY-DKDGLKKRVNADLANGIGNLVSRSVS 367
            ++I+++G D LR+++       E+  GK+ F    DG ++             +  ++ 
Sbjct: 626 QDIIKDMGADGLRFWIASADYRYEMTAGKEIFSRASDGYRR-------------IRNTLR 672

Query: 368 MILKDYDGMIPTPGAFTES-----DESILSVCSRV---LQEIRENMQNQLIHRAL 414
            +L + +G  P+  A   +     D+ IL   + V   +Q+  E M   ++  AL
Sbjct: 673 FLLANLNGFKPSTDALPVNELIALDQYILQRAAEVQKTIQQAYEEMNFHIVTNAL 727



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N Q H+GHA   ++ D++ +   +DG D  +  G D HG  I  K  
Sbjct: 57  KKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV V  ++  FR          +++   DF+R
Sbjct: 117 EKVG---KVGVKVDASTFRKACREYAYTQVELQKKDFVR 152


>gi|238752603|ref|ZP_04614076.1| Leucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238709194|gb|EEQ01439.1| Leucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 860

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|302391369|ref|YP_003827189.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203446|gb|ADL12124.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 828

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 44/256 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D  KA +W   D +V G +    H +Y   F+          A  P  +++ + G +L  
Sbjct: 521 DSKKANYWMNVDQYVGGIEHAILHLLYARFFMKFISDLGIADAKEPF-ERLLAQGMVLKD 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK---------RV 350
           G K+SKS GNV+DP+E+I+  G D  R F++      KD  +D +G+K          RV
Sbjct: 580 GAKMSKSKGNVVDPLEIIDNYGADTARLFMLFAAPPQKDLEWDDEGVKGASRFLDRVWRV 639

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QL 409
            A+  + I  +          D D +        +S++ +       ++++ E++ N + 
Sbjct: 640 TAEYTDQIKEI----------DLDNL--QIDNLDKSEKELYRSVHLAIKDVTEDLDNRKQ 687

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A++ ++ L++ + +Y D              A   + +    ++   +LL  F P +
Sbjct: 688 FNTAISSIMELINSLYQYRDQA------------AEENIELIALAVKTAILLLSPFAPHI 735

Query: 470 ANKIFDILFVADENRC 485
             +++  L  ++   C
Sbjct: 736 TEELWSKLGQSESVHC 751



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  DKPKHYTLEMFPYPSGNLHMGHVRVYSIGDVIARFKRMQGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  N +     L +SYD    + T    ++   + L+ ++  +   Y
Sbjct: 91  IERDIHPNSWTWDNIANMKKQLKSLGLSYDWNREVATCHPDYYKWTQWLFLQLYKEDLAY 150

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  W    +    N+  V  G +      +  N  QW      FF+++ Y D+LL 
Sbjct: 151 KQESAVNWCPGCETVLANEQVVNGGCERCDTEVEEKNLAQW------FFKITEYADELLE 204

Query: 179 YYE 181
            +E
Sbjct: 205 DHE 207


>gi|289423107|ref|ZP_06424922.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156438|gb|EFD05088.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 1041

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 20/234 (8%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  ++   P  K V     +L K G+K+SKS GN 
Sbjct: 548 QLFPADYICEGIDQTRGWFYSLLAVSTFVTGKAPY-KNVLVTDLVLDKNGKKMSKSKGNT 606

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I+P E+ ++ GVDALR++L+          +D+DGLK+ V    +  +G L +      L
Sbjct: 607 INPFEMFDKYGVDALRWYLLYVSPPWTPIRFDEDGLKEIV----SKFVGTLKNTYTFFTL 662

Query: 371 -KDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
             + DG+ P           E D  ILS  + +  E+ EN++   +++ + ++   ++ +
Sbjct: 663 YANTDGIHPNDFFVDYKDRPELDRWILSKFNNLKAEVEENLEIFEVNKTIRRMTEFLNDD 722

Query: 424 VDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  ++     ++ W  + T   ++  V   T EV+ +   L+  F P L+ +++
Sbjct: 723 LSNWYIRRSRRRFWGTELTQDKKS--VYNTTYEVLTEFCKLIAPFAPYLSEEMY 774


>gi|163791562|ref|ZP_02185965.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873167|gb|EDP67268.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 805

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 23/202 (11%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E  Y      YP+ Q  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 29  EKENFYALDMFPYPSGQGLHVGHPEGYTATDIVSRLKRAQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTAHNIETFRRQINSLGFSYDWEREVNTTDPDYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV------QWMEEEGYFFRLSAY 172
           Y+   +  W         N++ +    DG+     H PV      QWM       +++AY
Sbjct: 149 YEAEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVFRKPMRQWM------LKITAY 197

Query: 173 QDKLLSYYE--SHPEFILPIER 192
            D+LL   E    PE I  ++R
Sbjct: 198 ADRLLDDLELVDWPESIKDMQR 219



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILH-K 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 514 DPEKLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E+ G D LR + +          ++++GL+         G  
Sbjct: 574 NEKMSKSKGNVVNPDDVVEKFGADTLRMYEMFMGPLDASIAWNENGLE---------GSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ D +G +      T +D  +  V  + ++++ E+ +    + A++Q++ 
Sbjct: 625 KFLDRVWRLIM-DEEGKV-RDRITTFNDGYLDVVYHQTVKKVTEDFEQLRFNTAISQMMV 682

Query: 420 LVSEV 424
            V+E 
Sbjct: 683 FVNEA 687


>gi|157363246|ref|YP_001470013.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980059|sp|A8F465|SYI_THELT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157313850|gb|ABV32949.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 911

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 23/150 (15%)

Query: 230 VWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           VWID+ +++   LTT   L          +PAD+++ G D  R    +  + +LS    +
Sbjct: 525 VWIDSGSSFEAVLTTRPELT---------FPADMYLEGSDQHR--GWFNSSLVLSVITHD 573

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGK 337
            P  K V +HGFI   +G+K+SKSLGNV+DP+EV  + G D LR +L       +I   K
Sbjct: 574 KPPYKTVLTHGFIKDAEGKKMSKSLGNVVDPLEVCSKYGADVLRLWLASSDYFNDIRISK 633

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           +  + +  + K++   +   +GNL   SV+
Sbjct: 634 NIIFQQVEVYKKIRNTIRYLLGNLQDFSVT 663


>gi|50083317|ref|YP_044827.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81394060|sp|Q6FG02|SYI_ACIAD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49529293|emb|CAG67005.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 945

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 31/175 (17%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K + +HGF++  KG K+SKSLGN+I P
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSIAINERAPY-KGLLTHGFVVDEKGRKMSKSLGNIITP 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFY-DKDGLKKRVNADLANGIGNLVSRSVS 367
            ++I+++G D LR+++       E+  GK+ F    DG ++             +  ++ 
Sbjct: 626 QDIIKDMGADGLRFWIASSDYRYEMTAGKEIFSRASDGYRR-------------IRNTLR 672

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRV---LQEIRENMQNQLIHRAL 414
            +L + +G  P+  A         D+ IL   + V   +Q+  E+M   ++  AL
Sbjct: 673 FLLANLNGFTPSTDALPVDQLIALDQYILQRAAEVQKTVQQAYEDMNFHIVCSAL 727



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N Q H+GHA   ++ D++ +   +DG D  +  G D HG  I  K  
Sbjct: 57  KKKYVLHDGPPYANGQIHLGHAVNKVLKDIIVKSRVMDGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV V  ++  FR          +D+   DFIR
Sbjct: 117 EKVG---KVGVKVDASTFRKACREYALSQVDLQRKDFIR 152


>gi|284161131|ref|YP_003399754.1| valyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011128|gb|ADB57081.1| valyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 864

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L   G+ D       K +P  L   G DI+R  A Y    +  L   +
Sbjct: 444 VLDTWMDSSITPLVICGWPD------LKEYPTHLRPQGHDIIRTWAFYTILRSLALVDEI 497

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +   +   G K+SKSLGNVI P E+IE+ G DALR +    +  G+D  +   
Sbjct: 498 PWLEIVINGMVLGEDGRKMSKSLGNVISPEEIIEKYGADALRQWAATGV-IGEDVAFSWK 556

Query: 345 GLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +K   R      + I     R V+M LK+       P    ++D  ILS   ++++E+ 
Sbjct: 557 EVKSAYRFEQKFWSII-----RFVTMHLKEKPPY--KPELLRDADRWILSKLMKLVREVD 609

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           E+M      +AL  + S       D Y +  K   L     +      +   +V   L  
Sbjct: 610 ESMNAYRFDKALKAIRSFTWYEFADNYLEIVKN-RLYSGTEEEKIPARFTLYKVASTLIK 668

Query: 461 LLQAFVPKLANKIFDILFVA 480
           LL    P LA + +  L  A
Sbjct: 669 LLAPITPFLAEECWHRLHEA 688



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGV 67
           I T   YP    H+G+A      D +AR+ R+ G +V+F  G D HG     K  +  G+
Sbjct: 36  IDTPPPYPTGSFHLGNALNWCYIDFIARYRRMKGYEVMFPQGWDCHGLPTEVKVEEIHGI 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +     D     FR +     +   + +R T +R
Sbjct: 96  SKN---DVPREEFRRLCMEFTMKNIEKMRETMRR 126


>gi|222153825|ref|YP_002563002.1| leucyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782864|sp|B9DW16|SYL_STRU0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222114638|emb|CAR43674.1| leucyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 833

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|300709425|ref|YP_003735239.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123108|gb|ADJ13447.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 1069

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 36/278 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYW 275
           ++PD    +  VW+D+    + + G LD P G + +F   WPADL +   D  R    +W
Sbjct: 533 RVPD----VFDVWLDS---SVASWGTLDYP-GKEEEFDELWPADLIMEAHDQTR--GWFW 582

Query: 276 PAFLL--SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
               +  +A   +P  +V  HGF    +G+K+SKS+GNV+ P E I+  G DA+R FL+ 
Sbjct: 583 SQLGMGTAALGEVPYDEVLMHGFANDSEGKKMSKSVGNVVQPHEAIQRHGSDAMRLFLLS 642

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE------ 385
               G+D  +  D +   +  +L N + N+    +  +    DG  P             
Sbjct: 643 VNPQGEDMRFSWDEMAT-MERNL-NILWNVFRFPLPYMR--MDGFDPEETDLDAVDSDLE 698

Query: 386 -SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDA---QKPWELKKTN 440
             DE IL+    V +E+          +AL+ ++  V E V R++     ++ W+ + + 
Sbjct: 699 LVDEWILARLQTVTREMTAAWDEFRQDQALSALMEFVVEDVSRFYIQVVRERMWDEEDSP 758

Query: 441 PDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
              A+   Y T+  V+RQ+  LL  + P +  +I+  L
Sbjct: 759 SKNAA---YATLYHVLRQVCALLAPYAPFITEEIYGAL 793


>gi|15791045|ref|NP_280869.1| leucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236795|ref|YP_001689995.1| leucyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|48428562|sp|Q9HN72|SYL_HALSA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10581638|gb|AAG20349.1| leucine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727861|emb|CAP14649.1| leucine--tRNA ligase [Halobacterium salinarum R1]
          Length = 885

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 16/178 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y + Q H+GH     I D  AR+ R+DG DVL   G D  G     AA     
Sbjct: 37  YVLAMFPYTSGQLHMGHVRNYAITDAFARYRRMDGEDVLHPMGWDSFGLPAENAANERDT 96

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG--- 122
             + + ++     RD  + L   YD    I T +  ++   + L+ +  D G + +    
Sbjct: 97  NPREWTERCIDQMRDQFEALGFGYDWEREITTCDPDYYKWNQWLFTEFRDAGLVDRRAAT 156

Query: 123 ---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              C S    L DE    DDE+    D         PV   + + +FF  +AY D+LL
Sbjct: 157 VNWCPSCETVLADEQVEGDDELCWRCD--------TPVTERDLDQWFFETTAYADELL 206


>gi|320450628|ref|YP_004202724.1| isoleucine-tRNA ligase [Thermus scotoductus SA-01]
 gi|320150797|gb|ADW22175.1| isoleucine-tRNA ligase [Thermus scotoductus SA-01]
          Length = 1043

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Y++ VW D+      +  Y  +N +  K  F PAD    G D  R  F++++    +L  
Sbjct: 513 YVIDVWYDSGAMPFASLHYPFENGEEFKEAF-PADFIAEGIDQTRGWFNSLHQLGVMLFG 571

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++   K V  HG IL  KG+K+SKS GNV+DP ++I E G DALR+++
Sbjct: 572 SIAF-KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYI 618


>gi|297170410|gb|ADI21442.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_10G19]
          Length = 803

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 30  DQKKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMRGFNVLQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  + + ++N  N +     L  SYD    ++T +  ++   + ++  + D G +Y
Sbjct: 90  IQNKVDPQTWTEKNIANMKLQLKQLGFSYDWTKELKTCDPNYYRWEQEMFTLLQDNGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K      +   D+    +++V    DG+ + +    V+  E + +F +++ Y D+LL
Sbjct: 150 KKKSLVNWDPVDKTVLANEQV---IDGKGWRSGAT-VELKEIDQWFLKITDYADELL 202



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 10/87 (11%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
           +++W P D+++ G +    H +Y   F        L++ + P  KK+ + G +L  G K+
Sbjct: 501 SEYWLPVDIYIGGIEHAILHLLYSRFFHKAMRDMGLVNGDEPF-KKLLTQGMVLKDGTKM 559

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330
           SKS GN +DP + I+  G D +R +++
Sbjct: 560 SKSKGNTVDPQKYIDHYGADTIRLYMM 586


>gi|83854681|ref|ZP_00948211.1| valyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842524|gb|EAP81691.1| valyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 978

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 38/278 (13%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G  +  DP  ++  W  +    + T G+ +  D   AK++P  + + G DI+ F    W 
Sbjct: 534 GKTLTRDPD-VLDTWFSSGLWPIGTLGWPEQTD-ELAKYFPTSVLITGFDIIFF----WV 587

Query: 277 AFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++     +  +     V+ H  +   KG+K+SKSLGNV+DP+++I+E G DA+R+ L 
Sbjct: 588 ARMMMMQYAVVDQKPFDTVYVHALVRDEKGKKMSKSLGNVLDPLDLIDEYGADAVRFTLT 647

Query: 331 REIACGKD--------GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              A G+D          Y   G  K  NA     +  +   SV+ +         T  +
Sbjct: 648 AMAAMGRDLKLSTARIAGYRNFG-TKLWNAHRFAEMNGVFEDSVAAV---------TYTS 697

Query: 383 FTESDES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL 436
            T+ D +    I+   +RV +E+   + N   + A   + + V     D Y +  KP  L
Sbjct: 698 HTQVDHTLNKWIIGETARVREEVDAALDNYRFNDAANALYAFVWGKVCDWYVELSKPL-L 756

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   P+ A T   +   V+ Q  +LL   +P +  +++
Sbjct: 757 QDDAPEAAETRQTLKW-VLDQCLVLLHPIMPYITEELW 793



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 6   KLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K   S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           
Sbjct: 35  KETFSVMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQD----------- 83

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDF 94
           +AG+ T++ V++     +D     D + +DF
Sbjct: 84  HAGIATQMVVERELA--KDGKRRTDFTREDF 112


>gi|222824044|ref|YP_002575618.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782489|sp|B9KCS8|SYL_CAMLR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222539266|gb|ACM64367.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 809

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYSIGDAMARYYRKKGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  GIHPKKWTYENIDYMQNELASLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +   D+    +++V    DG+ +   H  ++  +  GY+ +++AY D+LL
Sbjct: 152 AEVNWCENDKTVLANEQV---EDGKCWRCGHEVIR-KKMPGYYVKITAYADELL 201



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ + G +   G K+SKS GNV+DP  +IE+ G D+ R F++
Sbjct: 566 RLLTQGMVTKDGAKMSKSKGNVVDPDYIIEKYGADSARLFIL 607


>gi|301793771|emb|CBW36159.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 883

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 15/189 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ +       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPNTETTDFKRYYPNSTLVTGYDIIPFWVSRMIFQGIEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILSVCS 395
           + +    N    N I N +SR + M        +  D    + T  A   +D  IL   +
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAHDNVTKVATGEAGNVTDRWILHNLN 618

Query: 396 RVLQEIREN 404
             + ++ EN
Sbjct: 619 ETIAKVTEN 627



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ S   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYSTTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|299139450|ref|ZP_07032625.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598719|gb|EFI54882.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 855

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 41/249 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG 300
           D  KA +W P D ++ G +    H IY   W   +    L  N    +++F+ G ++  G
Sbjct: 540 DSDKANYWFPIDQYIGGVEHAILHLIYSRFWTKVMRDLGLIKNAEPAERLFTQGMVIKDG 599

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+ P E+I   G DA R + +      +D  + ++G+          GI  
Sbjct: 600 AKMSKSKGNVVSPDEMISRYGADATRMYALFAAPPDRDLEWQEEGVA---------GISR 650

Query: 361 LVSR----------SVSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQN 407
            ++R           V  + K+  G    P A    T +  ++L    + + +I E+   
Sbjct: 651 FLARVYRLTSKFAPVVRELEKNAHGDEIAPSALAAQTPAGAALLRTLHQTIAKITEDFSG 710

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   +  +A ++ LV+E+     A           D     +    EV  +L ++L  F 
Sbjct: 711 RWHFNTCIAAIMILVNEISTAEAAM----------DAGDISVGTIAEVFHKLVLMLAPFA 760

Query: 467 PKLANKIFD 475
           P +A ++++
Sbjct: 761 PFMAAELWE 769



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 6/184 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y    + YP+ Q H+GH     I D LARF  + G +VL   G D  G     AA 
Sbjct: 42  KPKFYCLEMLPYPSGQLHMGHVRNYSIGDALARFMWMRGYNVLHPMGWDAFGLPAENAAL 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 + +  +N    +     + +SYD     + T    ++   + ++ K+ +    Y
Sbjct: 102 KNNTPPREWTLKNIEQMKVQMRRIGLSYDWAGTEVATCLPEYYRWNQWIFLKMVENDLAY 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +      +++V  G     +  +   V+  E E +F R++ Y D+LL   
Sbjct: 162 RKSSKVNWCPKCATVLANEQVIGGC---CWRHEDTLVEQRELEQWFLRITKYADELLDGL 218

Query: 181 ESHP 184
           +  P
Sbjct: 219 DKLP 222


>gi|268680239|ref|YP_003304670.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618270|gb|ACZ12635.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 815

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 18/182 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI +   YP+ + H+GH     I D +AR HR +G +VL   G D  G     AA 
Sbjct: 30  KAKKYILSMFPYPSGRIHMGHVRNYTIGDAIARHHRKNGFNVLHPIGWDSFGMPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------ISD 115
             GV  K +  +N    R     L +S+      ++KR      +L+ K        + +
Sbjct: 90  KHGVHPKKWTYENIDYMRKELASLGLSF------SKKREFAASDVLYTKHEQRIFIEMFN 143

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +Y+   +  +    +    +++V +G   +      NPV+     GY+ +++ Y  +
Sbjct: 144 KGLVYQKSATLNWCNTCQTVLANEQVEEGCCWRC----DNPVEQRLLPGYYLKITQYAQE 199

Query: 176 LL 177
           LL
Sbjct: 200 LL 201



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN +DP  +I+  G D  R F++
Sbjct: 572 LLTQGMVLKDGSKMSKSKGNTVDPDAIIKTYGADTARLFIL 612


>gi|225449768|ref|XP_002270806.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1099

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 49/216 (22%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   +     I+P ER  ++ +   S +KD  +SR+ + WG +IP   
Sbjct: 554 WFVTMEPLAEKALQAVQRGELTIMP-ERFEKIYNHWLSNIKDWCISRQLW-WGHRIPVWY 611

Query: 222 -----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNP 248
                 + +YI+                              W  +     +T G+ D  
Sbjct: 612 IVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVS 671

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEK 302
                KF+P  +   G DIL F    W A ++   +     V     + HG I   +G K
Sbjct: 672 TQDFKKFYPTTVLETGHDILFF----WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRK 727

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 728 MSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 762



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA  + + D++ R+HR+ G   L+  GTD           +AG+ T++ V++
Sbjct: 248 HMGHAMFVTLEDIMVRYHRMKGRPTLWIPGTD-----------HAGIATQLVVER 291


>gi|15828728|ref|NP_326088.1| valyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|81533027|sp|Q98QV4|SYV_MYCPU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14089670|emb|CAC13430.1| VALYL-TRNA SYNTHETASE (VALINE--TRNA LIGASE) (VALRS) [Mycoplasma
           pulmonis]
          Length = 827

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 151/356 (42%), Gaps = 65/356 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ + ++ +F ++  +   +L   ES  +      R  + +    +   D ++SR+ + 
Sbjct: 346 PIEILVKKQWFVKMDLFSKMVLDSLESKNKVNFYPSRFKKNLEGWMNKTYDWTISRQLW- 404

Query: 216 WGIKIP---DDPQYIMYV------WI---DALTNYLTTT----GYLDNPDGSKA--KFWP 257
           WG +IP    D Q  + +      W    D L  + ++      +   P+  K   +++P
Sbjct: 405 WGHQIPAWYKDEQTKVQLNSPGPDWTQDPDVLDTWFSSAIAPFSFFGWPNTYKKLKRYYP 464

Query: 258 ADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
             L V G DI+ F    +Y+       + P    V  HG I   +  K++KSLGN IDP+
Sbjct: 465 TSLLVTGHDIIFFWVSRMYFSGLYFMKDKPF-NDVLLHGLIRDEQRRKMTKSLGNGIDPM 523

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV--------SRSV 366
            +I++ G D+LR+FL+     G D  Y+++ +K   N    N + N+         ++ V
Sbjct: 524 VLIDQYGSDSLRWFLITNTTPGLDITYNEEKIKSSWN--FMNKLWNIARFINLQENTKKV 581

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL----VS 422
           SM   DY          ++    + S   + +++    +  + I++ +    S      S
Sbjct: 582 SMSKYDY--------WISDKFNKVESYVKKFMKKYEFTLIGKEIYKFIINDFSSWYLEFS 633

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++ +  D QK                     + ++L +LL  F+P L + +F I++
Sbjct: 634 KITKNIDFQKV--------------------IFKRLLLLLHPFIPFLTDHLFKIIY 669


>gi|269102010|ref|ZP_06154707.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161908|gb|EEZ40404.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 858

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAEELLNDL 206

Query: 179 -YYESHPEFILPIER 192
              +  P+ +  ++R
Sbjct: 207 DQLDGWPDMVKTMQR 221


>gi|145250135|ref|XP_001396581.1| leucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134082094|emb|CAK42211.1| unnamed protein product [Aspergillus niger]
          Length = 989

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA 
Sbjct: 84  KPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAAI 143

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    + + N    ++    +  S+  D  + T     ++  + ++  + +KG  Y+
Sbjct: 144 ERGIDPAEWTESNITKMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYEKGLAYQ 203

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 Y   D+    +++V   A+G  + +    V+ ++ + +FFR++ +++ LL   +
Sbjct: 204 AEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDLD 260

Query: 182 S----HPEFILPIER 192
           S     PE +L ++R
Sbjct: 261 SLAGGWPERVLSMQR 275


>gi|146321931|ref|YP_001201642.1| leucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145692737|gb|ABP93242.1| Leucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292559344|gb|ADE32345.1| Leucyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 839

 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 36  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 96  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 155

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 156 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 209

Query: 177 LSYYES--HPEFILPIER 192
           L+  E    PE I  ++R
Sbjct: 210 LNDLEEVDWPESIKDMQR 227


>gi|328472490|gb|EGF43353.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 857

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           ++    PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L T    +NP+
Sbjct: 260 I-AAGHPLATLAAENNPE 276


>gi|241762486|ref|ZP_04760563.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241372988|gb|EER62655.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 884

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 25/274 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +      T G+ D    S  ++ P D+ + G DIL F    W 
Sbjct: 445 GVNLRRDPD-VLDTWFSSALWPFATLGWPDTDPKSLGRY-PNDVLISGFDILFF----WD 498

Query: 277 AFLLSANL------PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A ++   L      P PK ++ HG +    G K+SKS GN +DP+ +I++ G DALR+ L
Sbjct: 499 ARMIMQGLHFMKDVPFPK-LYLHGLVRAADGSKMSKSKGNTVDPLGLIDKYGADALRFTL 557

Query: 330 VREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
               + G+D   D    +KRV    + A  + N V  + +          P P A   ++
Sbjct: 558 CAMESQGRDIKLD----EKRVEGYRNFATKLWNAVRFAQNNNCAVNTSKQP-PEATLTTN 612

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR 443
             I++  ++V + + +++++         +   V     D Y +  KP     +  N   
Sbjct: 613 RWIIAETAKVARALDQHIEDMRYDELANSLYHFVWNDFCDWYLELIKPILTSTEDQNQGE 672

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               L V   VI Q+ I+L   +P +  +++  L
Sbjct: 673 LQETLAVLGWVIDQILIMLHPIMPFITEELWHAL 706



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          HIGHA +  + D+L R  RL G D L+  GTD           +AG+ T++ V++N
Sbjct: 50 HIGHALDDTLQDILVRHARLKGKDALWVVGTD-----------HAGIATQMVVERN 94


>gi|89092047|ref|ZP_01165002.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083782|gb|EAR62999.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 863

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  QKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R+  + +   YD    + T    ++   +  + K+ DKG +Y
Sbjct: 91  MKNNVAPAKWTYENIDYMRNQLEQMGFGYDWNRELATCHPEYYRWEQWFFTKLMDKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K      +   D+    +++V  G     G     +  P QW      F +++ Y D+LL
Sbjct: 151 KKEAEVNWDPVDQTVLANEQVIDGRGWRSGALVERKKIP-QW------FLKITDYADQLL 203

Query: 178 S 178
           S
Sbjct: 204 S 204


>gi|307709947|ref|ZP_07646394.1| leucyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619318|gb|EFN98447.1| leucyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 833

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 NDLDELDWPESIKDMQR 221


>gi|195428976|ref|XP_002062540.1| GK16600 [Drosophila willistoni]
 gi|194158625|gb|EDW73526.1| GK16600 [Drosophila willistoni]
          Length = 877

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++K Y+ +   YP+   H+GH     I+D +ARFHR+ G +V    G D  G     A
Sbjct: 59  QSQDKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFHRMCGKNVFQPIGWDSFGLPAENA 118

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   GV    + DQN    +   + L  S+D
Sbjct: 119 ANQRGVEPSQWTDQNISQMKQQLERLGCSFD 149


>gi|29831994|ref|NP_826628.1| valyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81717646|sp|Q82CA3|SYV_STRAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29609112|dbj|BAC73163.1| putative valyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 874

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 7/178 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           ++  W  +     +T G+ +  + S AKF+P  + V G DIL F       F L A    
Sbjct: 454 VLDTWFSSGLWPFSTLGWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGT 512

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +  + G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +
Sbjct: 513 PPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGE 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D ++   N   AN I N  +R   M     +G +P     + +D  ILS  +  + E+
Sbjct: 573 DWVQGSRN--FANKIWN-ATRFALMNGATVEGELPPVEQQSATDRWILSRLNATVAEV 627


>gi|327459125|gb|EGF05473.1| leucine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 861

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 230

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 231 LLNDLEELDWPESIKDMQR 249


>gi|254487076|ref|ZP_05100281.1| valyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043945|gb|EEB84583.1| valyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 1025

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 14/128 (10%)

Query: 208 SLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           S+++K  D G  +++  DP  ++  W  +    + T G+ ++    K  F  +DL + G+
Sbjct: 570 SIAQKFDDHGQPVRLWRDPD-VLDTWFSSGLWPIGTLGWPEDTPELKKYFPTSDL-ITGQ 627

Query: 266 DILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
           DIL F    W A ++   L + K+     V+ HG +   KG+K+SKS+GNVIDP+E+I+E
Sbjct: 628 DILFF----WVARMMMMQLDVVKQIPFNTVYLHGLVRDAKGKKMSKSVGNVIDPLEIIDE 683

Query: 320 VGVDALRY 327
            G DALR+
Sbjct: 684 YGADALRF 691



 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          N   H+GHA+   + D+L R+HR+ G D L+  G D  G  +  A +N
Sbjct: 48 NGSLHVGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIALQLAVEN 95


>gi|189083221|sp|A4VY58|SYL_STRSY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 833

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 203

Query: 177 LSYYES--HPEFILPIER 192
           L+  E    PE I  ++R
Sbjct: 204 LNDLEEVDWPESIKDMQR 221


>gi|325693816|gb|EGD35735.1| leucine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 861

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 230

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 231 LLNDLEELDWPESIKDMQR 249


>gi|293397302|ref|ZP_06641574.1| leucine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291420220|gb|EFE93477.1| leucine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 860

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++AY D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|146319735|ref|YP_001199447.1| leucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145690541|gb|ABP91047.1| Leucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 839

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 36  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 96  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 155

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 156 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 209

Query: 177 LSYYES--HPEFILPIER 192
           L+  E    PE I  ++R
Sbjct: 210 LNDLEEVDWPESIKDMQR 227


>gi|95930108|ref|ZP_01312847.1| valyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133802|gb|EAT15462.1| valyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 886

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 26/265 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +  D    KF+P    + G DIL F    W A ++   L  
Sbjct: 449 VLDTWFSSGLWPFSTMGWPEKTDALN-KFYPTSCLITGFDILFF----WVARMMMMGLKF 503

Query: 285 --PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P K V+ H  +   +G+K+SKS GNVIDP+ VI+E G DA R+ L    A G+D  
Sbjct: 504 MGEVPFKDVYIHALVRDAQGQKMSKSKGNVIDPLTVIDEFGTDAFRFTLTAFAAQGRDVK 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSR 396
              + +    N    N + N  SR   M L+ ++  + TP     + + +D  IL+  + 
Sbjct: 564 LSTERIGGYRN--FCNKLWN-ASRFTLMNLEGFEP-VDTPNWDELSLSMADRWILTRLTE 619

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR--ASTVLYVTV 452
           V +E  + ++    + A + + +       D Y +  K          +  A TV+Y   
Sbjct: 620 VEKEANKALEEYRFNEAASTLYTFTWHEFCDWYIELIKGALYGDDAAAKLSAQTVVYT-- 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+ +L  LL    P +  +I+  L
Sbjct: 678 -VLERLLRLLHPITPFITEEIWQNL 701



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + D+LAR+ R+ G +VL+  GTD  G
Sbjct: 40 SIVIPPPNVTGVLHMGHALNNTMQDILARWKRMTGHEVLWMPGTDHAG 87


>gi|114570478|ref|YP_757158.1| valyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114340940|gb|ABI66220.1| valyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 893

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 24/260 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D+      +++P  + +   DI+     +W A ++   L  
Sbjct: 464 VLDTWFSSALWPFSTLGWPDDTPEMVERYYPTSVLITAFDII----FFWVARMMMQGLHF 519

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+ H  +    G+K+SKS GNVIDP+E+I+E G DA+R+ L  +   G+D 
Sbjct: 520 MKVAPF-KDVYIHALVRDENGQKMSKSKGNVIDPLELIDEYGADAVRFTLAAQAGQGRDI 578

Query: 340 FYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSR 396
              K+ ++  +     L N        +  ++   YD     P + T++ ++ I+S  ++
Sbjct: 579 RMSKERVEGYRNFGTKLWNA-ARFAEMNECVVPDGYD-----PKSVTQTVNKWIISEAAQ 632

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++ I   +     + A A     V  V  D + +  KP    +    +A T    T  V
Sbjct: 633 AVEAINAGLDGYRFNDAAAAAYRFVWNVFCDWHLEFAKPLFNGEDEAAKAET-RATTAYV 691

Query: 455 IRQLAILLQAFVPKLANKIF 474
           + Q   +L  F+P +   ++
Sbjct: 692 LDQALKMLHPFMPFVTEALW 711



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 19/89 (21%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN   + HIGHA    + DVL R+ R+ G  VL+  GTD           +AG+
Sbjct: 40  SIVIPPPNVTGRLHIGHALNNTLQDVLVRYKRMLGCSVLWQPGTD-----------HAGI 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T++ V+      R +A   +IS  D  R
Sbjct: 89  ATQMVVE------RQLAQEGNISRADMGR 111


>gi|320108281|ref|YP_004183871.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926802|gb|ADV83877.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 846

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 41/260 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG 300
           D +KA +W P D ++ G +    H IY   W   +    L  N     ++F+ G ++  G
Sbjct: 533 DSAKANYWFPIDQYIGGVEHAILHLIYSRYWTKVMRDLGLIENDEPATRLFTQGMVIKNG 592

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN++ P E+I + G DA R + +      +D  + +DG+          GI  
Sbjct: 593 AKMSKSKGNIVSPDEMIAKYGADATRMYALFAAPPDRDLEWQEDGVA---------GISR 643

Query: 361 LVSRSVSMILKDYDGMIP-----------TPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            ++R   +  K    +             +  A T     +L    + + +I  +   + 
Sbjct: 644 FLARVYRLTTKYAPAIAAHEKREKKTHAGSFAALTPEGMKLLRKLHQTIAKITLDFSGRW 703

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  +A V++L++E+             +   D  +  +    EV R L +LL  F P 
Sbjct: 704 HFNTCIASVMTLMNEIS----------ASEALMDGGAIAVETQTEVFRVLTLLLAPFAPF 753

Query: 469 LANKIFDILFVADENRCFQS 488
           L+ +++ +L   +E   F++
Sbjct: 754 LSQELWGLL--GNEGPVFRA 771



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 7/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ Q H+GH     I D LAR+  + G +VL   G D  G     AA 
Sbjct: 44  KPKYYVLEMLPYPSGQLHMGHVRNYSIGDALARYQWMRGFNVLHPMGWDSFGLPAENAAI 103

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +  + +   N    R     + +SYD    + T    ++   + L+ K+ +KG  Y 
Sbjct: 104 KNNIPPREWTLGNIAEMRVQMRRMGLSYDWQREVTTCLPDYYKWNQWLFLKMYEKGLAYR 163

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W         N+  V    +G+ +  +   V+  +   +FFR++ Y D+LL
Sbjct: 164 KQSKVNWCPQCATVLANEQVV----NGRCWRHEDTVVEQRDLTQWFFRITKYADELL 216


>gi|159030421|emb|CAO91322.1| valS [Microcystis aeruginosa PCC 7806]
          Length = 906

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 147/333 (44%), Gaps = 39/333 (11%)

Query: 184 PEFILPIERRNEVIS---FVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNY 238
           P + +  E  NE+ +   FV +  +  +L++   ++G  I I  DP  ++  W  +    
Sbjct: 416 PAWYIISETNNEITNHTPFVVAWDETSALAKAKQEYGEDIIIQQDPD-VLDTWFSSGLWP 474

Query: 239 LTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHG 294
            +T G+   P+ +     ++P    V G DI+ F    +   A   +  +P  K V+ HG
Sbjct: 475 FSTMGW---PEKTLDLDTYYPTTTLVTGFDIIFFWVARMTMMAGYFTRQMPF-KDVYIHG 530

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD---GFYDKDGLKKR 349
            +    G+K+SKS  N IDP+ +I++ G DALRY L+RE+A  G+D    +  K    + 
Sbjct: 531 LVRDENGKKMSKSANNGIDPLILIDKYGTDALRYTLIREVAGAGQDISLQYNRKTDESES 590

Query: 350 VNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDESILSVCSRVLQ 399
           V A  + AN I N  SR V M L+       TP    E        +D  ILS   + +Q
Sbjct: 591 VEAARNFANKIWN-ASRFVMMNLEG-----KTPEELGEPVLENLELADRWILSRYHQTVQ 644

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + R+ ++N  +  A   +   +     D Y +  K    K       +T       ++  
Sbjct: 645 KTRDYLENYGMGEAAKGLYEFIWRDFCDWYIELVKTRLWKDKESVSCATARQTLAFILAG 704

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              LL  F+P +  +I+  L    EN+   +L+
Sbjct: 705 TLKLLHPFMPHITEEIWHNL--TQENQQVLALE 735


>gi|304315496|ref|YP_003850643.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|9297121|sp|P26499|SYI_METTM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68525|pir||SYEXI isoleucine-tRNA ligase (EC 6.1.1.5) [validated] - Methanobacterium
           thermoautotrophicum (strain Marburg)
 gi|149728|gb|AAA72950.1| transfer RNA-Ile synthetase [Methanothermobacter
           thermautotrophicus]
 gi|302588955|gb|ADL59330.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 1045

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 26/217 (11%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           ++V  HGF L  +G K+SKSLGNV++P +VIE+ G D LR++L+      +D  +  D L
Sbjct: 576 RRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLLWANKPWEDLKFVWDEL 635

Query: 347 KKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCSRVL 398
           K  VN  + N + N+ V  +  M L  +      PG        F + D  I+S  + V 
Sbjct: 636 KN-VNK-MFNILWNVYVFATTYMSLDRF-----QPGDHELEDLHFRDEDRWIISRVNSVA 688

Query: 399 QEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVTV 452
            ++ E + N   HRA  ++   +V ++ R++      + W +++ +PD+  A   LY   
Sbjct: 689 LKVTEALDNLHFHRATREIHDFIVEDLSRWYIRLIRSRTW-IERDDPDKLAAYHSLYTA- 746

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             ++ L + L    P +   I+  L    E    +S+
Sbjct: 747 --LKTLIVTLSPIAPHVCEDIYQNLVRGAEPDSPESI 781


>gi|90416857|ref|ZP_01224786.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331204|gb|EAS46448.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 867

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  DREKFYCLAMFPYPSGKLHMGHVRNYTITDVIARYQRMQGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +     L   I +   + T +  ++   +  + K+ +KG +Y
Sbjct: 91  IQNKTAPAKWTHENIAYMKAQLKSLGFGIDWSRELATCDPDYYKWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   +  +   D     +++V    DG  +    +PV+  E   +F R++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDATVLANEQVI---DGCCWRCD-SPVERKEIPQWFIRITDYAEQLLNDL 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DELEHWPEQVKTMQR 221


>gi|83593131|ref|YP_426883.1| valyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83576045|gb|ABC22596.1| Valyl-tRNA synthetase, class Ia [Rhodospirillum rubrum ATCC 11170]
          Length = 879

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+ D      A+++P D+ V G DI+ F    W A ++      
Sbjct: 452 VLDTWFSSALWPFSTLGWPDQTP-ELARYYPGDVLVTGFDIIFF----WVARMMMMGHYV 506

Query: 282 -ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  + V+ H  +   KG+K+SKS GNVIDP+++ ++ G DALR+ L+   A G+D
Sbjct: 507 MGDVPF-RDVYIHALVRDEKGQKMSKSKGNVIDPLDMTDQYGTDALRFTLIAMAAQGRD 564



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + D L R+HR+ G D L+  G+D           +AG+ T++ V++ 
Sbjct: 50 HMGHALTFTLQDTLIRYHRMSGRDALWQPGSD-----------HAGIATQMVVERQ 94


>gi|147668810|ref|YP_001213628.1| leucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|254782493|sp|A5FP73|SYL_DEHSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146269758|gb|ABQ16750.1| leucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 813

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 41/267 (15%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+ GY   P D  K K+W P DL+  G +    H  Y   F        ++    P  KK
Sbjct: 509 TSPGYDKGPFDPVKLKYWMPVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPF-KK 567

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L+      + G ++  GL   
Sbjct: 568 LFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYLMFVGPWDQGGEWNDSGL--- 624

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQ 408
                 +G+   ++R  ++  ++Y     TP  A  E++  +     + +++I  +++  
Sbjct: 625 ------SGMSRWLNRVWNLFTEEY-----TPQTASAEAERELKRTLHQTIKKITMDIERL 673

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  +A ++ L + + +         LK+T    A          ++  A++L    P 
Sbjct: 674 RFNTVVAALMELSNSLAK---------LKETAAISAENWQ----NTLQTFALMLAPVAPH 720

Query: 469 LANKIFDILFV--ADENRCFQSLDQRL 493
           +A +++  L +  +  N+ + + D+ L
Sbjct: 721 IAEELWANLGMKYSIHNQNWPTWDEEL 747



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 7/192 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLRGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHNIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V    DG  +  +  P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQV---VDGTCWRCE-TPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 -SHPEFILPIER 192
              PE I  ++R
Sbjct: 208 LDWPEKITAMQR 219


>gi|253752723|ref|YP_003025864.1| leucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754549|ref|YP_003027690.1| leucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756482|ref|YP_003029622.1| leucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189083219|sp|A4W4F3|SYL_STRS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251817012|emb|CAZ52661.1| leucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818946|emb|CAZ56789.1| leucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820795|emb|CAR47557.1| leucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759140|gb|ADV71082.1| leucyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 833

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 203

Query: 177 LSYYES--HPEFILPIER 192
           L+  E    PE I  ++R
Sbjct: 204 LNDLEEVDWPESIKDMQR 221


>gi|328945290|gb|EGG39443.1| leucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 837

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 33  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRARGYNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 93  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 152

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 153 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 206

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 207 LLNDLEELDWPESIKDMQR 225


>gi|297617013|ref|YP_003702172.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144850|gb|ADI01607.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 926

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         PD      WPAD+++ G D  R  F++    +  ++   
Sbjct: 528 IMDVWFDSGSSHKAVLE--TRPDLR----WPADMYLEGSDQHRGWFNSSLSTSVAVTGRA 581

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + V +HGF++  +G K+SKSLGNV+DP+ +IE++G D LR ++
Sbjct: 582 PY-RIVLTHGFVVDEQGRKMSKSLGNVVDPLNIIEKMGADILRLWV 626



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 15/123 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTT-KVF 72
           Y N   H+GH    ++ D++ ++  + G +  +  G D HG  I + A  A G+   K  
Sbjct: 61  YANGHIHVGHTLNKVLKDIIVKYKSMTGYNAPYVPGWDTHGLPIEQQAIKALGLDRHKTD 120

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDI 119
           V +  R+ ++ A   ++I  ++F R            T E R       ++ +++ KG I
Sbjct: 121 VLEFRRHCKEYAWKYVNIQREEFRRLGVRGDWENPYLTLEPRFEAVQIRVFGEMAKKGYI 180

Query: 120 YKG 122
           YKG
Sbjct: 181 YKG 183


>gi|300088135|ref|YP_003758657.1| valyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527868|gb|ADJ26336.1| valyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 880

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 21/266 (7%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           I  DP  ++  W  +     +T G+ ++ D  + +F+P  +   G DIL F    W A +
Sbjct: 449 IEQDPD-VLDTWFSSGLWPHSTLGWPNDSDDLR-RFYPTGVMETGYDILFF----WVARM 502

Query: 280 LSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           ++  L    K+  H   LH      KGEK+SK  GNV++P+++I++ G DALR+ +    
Sbjct: 503 ITMGLHNTGKIPFHTVYLHGLIRDEKGEKMSKVKGNVLNPLKLIDQYGTDALRFGITTGN 562

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           + G D     + L+   N   AN + N     +  + +   G + T       D  ILS 
Sbjct: 563 SPGNDIKLSLNRLEAGRN--FANKLFNASRFVIGHLNRTAPGQLNT-AVLPAEDRWILSR 619

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +RV+ ++   M+      A   +   +     D Y +  K     +       + L V 
Sbjct: 620 LNRVIGQVNAFMEEYQFGEAERAIHDFIWGEFCDWYIELSK----VRLQSGDGQSPLPVL 675

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           ++V+     LL  F+P +  +I+  L
Sbjct: 676 LKVLDTSLRLLHPFMPFVTEEIWQYL 701


>gi|254440081|ref|ZP_05053575.1| valyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198255527|gb|EDY79841.1| valyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 1054

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 12/111 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    + T G+ ++ D  K K++P    + G+DIL F    W A ++  
Sbjct: 619 DPD-VLDTWFSSGLWPIGTLGWPEDTDALK-KYFPTSDLITGQDILFF----WVARMMMM 672

Query: 283 NLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            L +      K ++ HG +   KG+K+SKS GNVIDP+++I+E G DALR+
Sbjct: 673 QLAVVNQVPFKTIYLHGLVRDAKGKKMSKSTGNVIDPLDIIDEYGADALRF 723



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA+   + D+L R+HR+ G D L+  GTD  G
Sbjct: 52 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGTDHAG 86


>gi|148559909|ref|YP_001258918.1| valyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371166|gb|ABQ61145.1| valyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|260168670|ref|ZP_05755481.1| valyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261758145|ref|ZP_06001854.1| valyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261738129|gb|EEY26125.1| valyl-tRNA synthetase [Brucella sp. F5/99]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|114798244|ref|YP_760384.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738418|gb|ABI76543.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 906

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 29/263 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ D  D  K  F+P    V   DI+     +W A ++      
Sbjct: 474 VLDTWFSSALWPFSTQGWPDETDALKT-FYPTATLVTAFDII----FFWVARMMMMGMEF 528

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +  +P  K V+ H  +L  KG+K+SKS GNV+DP+++I E G DALR+ + R    G++ 
Sbjct: 529 TGQVPF-KDVYIHALVLDEKGQKMSKSKGNVMDPLDLINEYGADALRFAMSRLAGQGRNI 587

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS---VC-- 394
              K  ++   N + +  + N V R   M      G I         +  ILS    C  
Sbjct: 588 RLSKQVVEG--NRNFSTKLWNAV-RFAEMNECGAPGPIDPSTIERPVNRWILSELDACVA 644

Query: 395 --SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             +R L+E R N     ++R +   +      D Y +  KP  L   +    S    V  
Sbjct: 645 DVTRGLEEYRFNEAAGALYRFIWNTL-----CDWYLELIKPL-LAGMDDGAKSETRMVCG 698

Query: 453 EVIRQLAILLQAFVPKLANKIFD 475
            VI +   LL  F+P +  ++++
Sbjct: 699 YVIDEALKLLHPFMPFVTEELWE 721



 Score = 40.4 bits (93), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + DVL RF R+ G +VL+  GTD           +AG+
Sbjct: 37 SIVIPPPNVTGVLHMGHALNNTLQDVLIRFERMRGKNVLWQPGTD-----------HAGI 85

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 86 ATQMVVERQ 94


>gi|315611716|ref|ZP_07886638.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315316131|gb|EFU64161.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 882

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 19/200 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 501

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 502 PF-KNALIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVRFSY 560

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +    N    N I N +SR    IL + +G+          D++  +V  +V+ +   
Sbjct: 561 EKMDASWN--FINKIWN-ISR---YILMNNEGLT--------LDQATANV-EKVVNKEAG 605

Query: 404 NMQNQLIHRALAQVISLVSE 423
           N+ ++ I   L + I  V+E
Sbjct: 606 NVTDRWILHNLNETIGKVTE 625



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 99  GEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 157 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 204


>gi|145219257|ref|YP_001129966.1| valyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205421|gb|ABP36464.1| valyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 902

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 47/209 (22%)

Query: 202 SGLKDLSLSRKTFDWGIKIPD--DPQYIMYV-------------------------WIDA 234
            G++D  +SR+ + WG +IP   DP+  ++V                         W  +
Sbjct: 407 GGIRDWCISRQLW-WGHRIPAWYDPEGQVWVAASYEEACHLAGTDKLVQDEDVLDTWFSS 465

Query: 235 LTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL------ 284
               LTT G+     DN D     F+P +  V G DI+ F    W A ++ A L      
Sbjct: 466 WLWPLTTLGWTGPGSDNDD--LRAFYPTNTLVTGPDIIFF----WVARMIMAGLYFKGDV 519

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P     F+      KG K+SKSLGN  DP++VI+  G DALR+ ++     G+D  + ++
Sbjct: 520 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEE 579

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDY 373
             K  +  + A  I N  SR V M  + Y
Sbjct: 580 --KCELGRNFATKIWN-ASRLVFMQREKY 605


>gi|289432203|ref|YP_003462076.1| leucyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945923|gb|ADC73620.1| leucyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 813

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 41/267 (15%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+ GY   P D  K K+W P DL+  G +    H  Y   F        ++    P  KK
Sbjct: 509 TSPGYDKGPFDPVKLKYWMPVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPF-KK 567

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L+      + G ++  GL   
Sbjct: 568 LFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYLMFVGPWDQGGEWNDSGL--- 624

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQ 408
                 +G+   ++R  ++  ++Y     TP  A  E++  +     + +++I  +++  
Sbjct: 625 ------SGMSRWLNRVWNLFTEEY-----TPQTASAEAERELKRTLHQTIKKITMDIERL 673

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  +A ++ L + + +         LK+T    A          ++  A++L    P 
Sbjct: 674 RFNTVVAALMELSNSLAK---------LKETAAISAENWQ----NTLQTFALMLAPVAPH 720

Query: 469 LANKIFDILFV--ADENRCFQSLDQRL 493
           +A +++  L +  +  N+ + + D+ L
Sbjct: 721 IAEELWANLGMKYSIHNQNWPTWDEEL 747



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 7/192 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLRGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHNIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V    DG  +  +  P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQV---VDGTCWRCE-TPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 -SHPEFILPIER 192
              PE I  ++R
Sbjct: 208 LDWPEKITAMQR 219


>gi|157150214|ref|YP_001451053.1| leucyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083156|sp|A8AZ43|SYL_STRGC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157075008|gb|ABV09691.1| leucyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 833

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 203 LLNDLEELDWPESIKDMQR 221



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 103/275 (37%), Gaps = 79/275 (28%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL------HK 299
           K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL      H+
Sbjct: 520 KAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHR 579

Query: 300 GE----------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           G                             K+SKSL NV++P +V+E+ G D LR + + 
Sbjct: 580 GALVATDKVEKRDGSFFNIETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMF 639

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    + ++GL+         G    + R           ++ T    TE+  ++ 
Sbjct: 640 MGPLDASIAWSEEGLE---------GSRKFLDRVYR--------LLNTKELVTENSGALD 682

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            V    ++ + E ++    + A+AQ++  V+  ++                     LY  
Sbjct: 683 KVYHETVKSVTEQLEELKFNTAIAQLMIFVNAANK------------------EEKLY-- 722

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           VE  +    LL  F P LA +++  +   DE+  +
Sbjct: 723 VEYAKGFIQLLAPFAPHLAEELWQAVAQTDESISY 757


>gi|73748126|ref|YP_307365.1| leucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123746148|sp|Q3ZWQ1|SYL_DEHSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|73659842|emb|CAI82449.1| leucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 813

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 41/267 (15%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKK 289
           T+ GY   P D  K K+W P DL+  G +    H  Y   F        ++    P  KK
Sbjct: 509 TSPGYDKGPFDPVKLKYWMPVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPF-KK 567

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L+      + G ++  GL   
Sbjct: 568 LFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYLMFVGPWDQGGEWNDSGL--- 624

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQ 408
                 +G+   ++R  ++  ++Y     TP  A  E++  +     + +++I  +++  
Sbjct: 625 ------SGMSRWLNRVWNLFTEEY-----TPQTASAEAERELKRTLHQTIKKITMDIERL 673

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  +A ++ L + + +         LK+T    A          ++  A++L    P 
Sbjct: 674 RFNTVVAALMELSNSLAK---------LKETAAISAENWQ----NTLQTFALMLAPVAPH 720

Query: 469 LANKIFDILFV--ADENRCFQSLDQRL 493
           +A +++  L +  +  N+ + + D+ L
Sbjct: 721 IAEELWANLGMKYSIHNQNWPTWDEEL 747



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 7/192 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLRGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHNIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V    DG  +  +  P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQV---VDGTCWRCE-TPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 -SHPEFILPIER 192
              PE I  ++R
Sbjct: 208 LDWPEKITAMQR 219


>gi|88811892|ref|ZP_01127145.1| Leucyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88790776|gb|EAR21890.1| Leucyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 867

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 37  RPSYYCLSMFPYPSGKLHMGHVRNYTIGDVVARYQRMLGRNVLQPMGWDAFGLPAENAAI 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  QN    R     L   YD    I T E  ++   + L+ ++  KG +YK
Sbjct: 97  QNRVPPAQWTRQNITYMRRQLKRLGFGYDWHREIATCEPSYYRWEQWLFTRLFRKGLVYK 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P QW      F +++AY D+LL 
Sbjct: 157 KTATVNWDPVDQTVLANEQVIDGKGWRSGAAVERRAIP-QW------FLKITAYADELLG 209

Query: 179 YYESHP 184
             +  P
Sbjct: 210 ALDELP 215


>gi|323353523|ref|ZP_08088056.1| leucine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121469|gb|EFX93232.1| leucine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 858

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRARGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 227

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 228 LLNDLEELDWPESIKDMQR 246


>gi|283852443|ref|ZP_06369712.1| valyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283572181|gb|EFC20172.1| valyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 889

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 12/128 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G  +  DP  ++  W  +     +T G+ D     KA F+P  + V   DIL F    W 
Sbjct: 442 GSALTRDPD-VLDTWFSSALWPFSTLGWPDETKELKA-FYPTSVLVTAFDILFF----WV 495

Query: 277 AFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L     +P K+V+ H  +   +G+K+SKSLGNVIDP+ ++E  G DALR+ L 
Sbjct: 496 ARMMMMGLHFRHEVPFKQVYIHALVRDAEGKKMSKSLGNVIDPLIMMERYGTDALRFTLA 555

Query: 331 REIACGKD 338
              A G+D
Sbjct: 556 AFAAMGRD 563



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 26/172 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     H+GHA  + I D+L R+HR  G +VL+  GTD  G      + ++  
Sbjct: 41  SIVIPPPNVTGALHMGHALNVTIQDILCRYHRQRGRNVLWVPGTDHAGIATQNVVERSLA 100

Query: 64  NAGVT-----TKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             GV+      + FV++  +             R +   +D + + F  T ++      R
Sbjct: 101 AEGVSREELGREAFVERVWKWREEYGGKILNQIRCLGASVDWTRERF--TFDEGLSKAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQ 158
            ++ ++ D+G IY+G Y   +  R      D EV Y    G+ Y+ ++ PV+
Sbjct: 159 EVFVRLYDEGLIYRGDYIINWCPRCHTALADLEVEYAPHIGKLYHIRY-PVE 209


>gi|87200859|ref|YP_498116.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136540|gb|ABD27282.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 904

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ D       K +P DL V G DIL F    W A +    L  
Sbjct: 484 VLDTWFSSALWPFATLGWPDEDAPLLKKHYPNDLLVSGFDILFF----WDARMAMQGLHF 539

Query: 285 --PLP-KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P KK++ HG +    G K+SKS GNV+DP+ +I++ G DALR+F+    + G+D  
Sbjct: 540 MKEVPWKKLYLHGLVRAADGAKMSKSKGNVVDPLGLIDKYGADALRFFMCAMESQGRDVK 599

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
            D    +KRV    + A  + N      S  +      +  P A +  ++ I+      +
Sbjct: 600 MD----EKRVEGYRNFATKLWNAARFCQSNGITGSTS-VAAPAATSAVNKWIIGEVVETV 654

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             + + M +     A   +   V   D++ D    W ++       +    V   V+ Q+
Sbjct: 655 AALDQAMADLRFDAAANAIYHFV--WDQFCD----WYIELIKGSFDTETKAVAGWVLDQI 708

Query: 459 AILLQAFVPKLANKIFDIL 477
            ++L  F+P +  +++  L
Sbjct: 709 LVMLHPFMPFVTEELWHAL 727



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 25/81 (30%)

Query: 16  PNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           P+AQP              HIGHA +  + DV  R+ RL G D L+  G D         
Sbjct: 41  PDAQPYTIVNPPPNVTGSLHIGHALDNTLQDVAIRYERLRGKDALWVVGMD--------- 91

Query: 62  AQNAGVTTKVFVDQNSRNFRD 82
             +AG+ T++ V++     +D
Sbjct: 92  --HAGIATQMVVERQMEARQD 110


>gi|46196634|gb|AAS81050.1| isoleucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 1067

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+      +  Y      +  + +PAD    G D  R  F++++    +L  +
Sbjct: 537 YVIDVWYDSGAMPFASLHYPFEHQETFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGS 596

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +   K V  HG IL  KG+K+SKS GNV+DP ++I E G DALR+++        D  + 
Sbjct: 597 IAF-KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYVSAPPEADRRFG 655

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
            + +++ V  D    + N+ S  V+    D   +   P P    E D  +L+    ++Q 
Sbjct: 656 PNLVRETVR-DYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQR 714

Query: 401 IRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           + E ++        RAL   +  V ++ +++  +      K          Y T+ E + 
Sbjct: 715 VTEALEAYDPTTSARALRDFV--VEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALV 772

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +A L   F P LA  ++  L
Sbjct: 773 LVATLAAPFTPFLAEVLWQNL 793


>gi|330994254|ref|ZP_08318182.1| Valyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758721|gb|EGG75237.1| Valyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 898

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P D+ V G DI+     +W A ++   L  
Sbjct: 469 VLDTWFSSALWPFSTLGWPER-TADLARYYPTDVLVTGFDII----FFWVARMMMMGLHF 523

Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K     KVF HG +   +G+K+SKS GN IDP+E+I+  G DA R+ +      G+D
Sbjct: 524 MKDVPFRKVFIHGLVRDERGQKMSKSKGNGIDPLEMIDTYGADATRFCICALTGLGRD 581



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          HIGHA  M + D L R+ R+ G DVL+  GTD           +AG+ T++ V++
Sbjct: 51 HIGHALTMTLQDTLIRWRRMQGRDVLWQPGTD-----------HAGIATQLVVER 94


>gi|325688602|gb|EGD30619.1| leucine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 858

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRARGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 227

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 228 LLNDLEELDWPESIKDMQR 246


>gi|315222465|ref|ZP_07864363.1| leucyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188433|gb|EFU22150.1| leucyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 833

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 203

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 204 LEDLEDLDWPESIKDMQR 221


>gi|75388379|sp|Q7X2N3|SYV_SPHEL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|32188220|gb|AAP46185.1| putative valyl-tRNA synthetase [Sphingomonas elodea]
          Length = 811

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 11/141 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +      T G+ +N D +    +  D+ + G DIL     +W 
Sbjct: 456 GVALTRDPD-VLDTWFSSALWPFATLGWPENSDPTLGGRYSNDVLISGFDIL----FFWD 510

Query: 277 AFLLSANLPLPKKV-----FSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L   K+V     + HG +    G+K+SKS GN +DP+ +I++ G DALR+F+ 
Sbjct: 511 ARMMMQGLHFMKEVPFKTLYLHGLVRAADGQKMSKSKGNTVDPLGMIDKYGADALRFFMA 570

Query: 331 REIACGKDGFYDKDGLKKRVN 351
              + G+D   D+  L+   N
Sbjct: 571 AMESQGRDIKMDEKRLEGYRN 591



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 20/94 (21%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAKAAQNAGVTTKV 71
           HIGHA +  + D+L R  RL G D  +  GTD  G         Q  A  ++    T + 
Sbjct: 51  HIGHALDNTLQDILVRHARLKGKDARWVVGTDHAGIATQMVVERQLNAAGSKRTDFTREA 110

Query: 72  FVD-----------QNSRNFRDMADVLDISYDDF 94
           FVD           Q +R  R +   +D + + F
Sbjct: 111 FVDKVWEWKAESGGQITRQLRRLGCSMDWANERF 144


>gi|86605939|ref|YP_474702.1| leucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|123751807|sp|Q2JV13|SYL_SYNJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86554481|gb|ABC99439.1| leucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 873

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 8/194 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 32  ESRKFYALSMFPYPSGSLHMGHVRNYTITDVIARHKRMQGYAVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+    +  QN    RD    L +SYD    I T    ++   + L+ +    G  Y
Sbjct: 92  IDRGIPPAKWTYQNIAQMRDQLQRLGLSYDWEREITTCAPDYYKWTQWLFLQFFKAGLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V   A+G+ + +     + + ++ +F +++AY D+LL+  
Sbjct: 152 QKEAPVNWDPVDQTVLANEQV--DAEGRSWRSGALVEKRLLKQ-WFLKITAYADQLLADL 208

Query: 181 E---SHPEFILPIE 191
           E     PE +L ++
Sbjct: 209 EKLSGWPERVLTMQ 222



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 33/191 (17%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK----------KRVNA 352
           +SKS GN +DP EV+   G D  R F++ +    KD  +D   ++          ++V  
Sbjct: 625 MSKSKGNGVDPEEVLANYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLNRVWRQVYE 684

Query: 353 DLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +  G G  +L  ++  ++    +      G+ T+++  +       ++E+ E+++    
Sbjct: 685 FVVRGSGTESLQGKAAELLQAKVEA-----GSLTKAERDLRRAVHTAIKEVSEDLEEYQF 739

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A ++ L + +        P                V  E IR L +LL  F P +A
Sbjct: 740 NTAIAGLMKLSNALAEAEIPDSP----------------VYAEGIRTLVLLLAPFAPHMA 783

Query: 471 NKIFDILFVAD 481
            +++  L   D
Sbjct: 784 EELWQALGGTD 794


>gi|82701645|ref|YP_411211.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123768294|sp|Q2YBQ2|SYL_NITMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82409710|gb|ABB73819.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 866

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 12/187 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  +   YP+ + H+GH     I DVL+R+HR+ G +VL   G D  G     AA
Sbjct: 31  EKRKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMQGYNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    R     L ++  +D  + T +  ++   + L+ ++ +KG  Y
Sbjct: 91  MQNNVPPAKWTYDNIAYMRKQLQSLGLAMDWDRELATCQPDYYRWNQWLFLRMLEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      +   D+    +++V  G     G        P+       Y+ +++AY D+LL
Sbjct: 151 RTTGIVNWDPVDQTVLANEQVIDGRGWRTGALVEKHEIPM-------YYMKITAYADELL 203

Query: 178 SYYESHP 184
               + P
Sbjct: 204 EALNALP 210


>gi|257460757|ref|ZP_05625858.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442088|gb|EEV17230.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 815

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D L+R++RL G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYSIGDALSRYYRLRGYNVLQPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY+  
Sbjct: 92  GIHPKTWTYENIDYMKNELHRLGFSFSARRMLATSDPLYTRWEQEFFIKLFEKGLIYRKS 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +   D+    +++V    +G+ +   +  VQ  +  GY+ +++AY  +LL
Sbjct: 152 AVVNWCEHDQTVLANEQV---EEGRCWRCGNEVVQ-KQMPGYYLKITAYAQELL 201



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++ + G +L  G K+SKS GN +DP ++IE  G D  R F++
Sbjct: 570 ERLLTQGMVLKDGAKMSKSKGNTVDPDDIIETYGADTARLFML 612


>gi|193216557|ref|YP_001999799.1| leucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001880|gb|ACF07095.1| leucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 804

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 19/203 (9%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K YI     YP+    H+GH       D+++RF RL+G DVL   G D  G    +
Sbjct: 26  KHNKKAYILDMFPYPSGMGMHVGHLEGYTATDIVSRFKRLNGFDVLHPIGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG- 117
            A N G     F  +N  NFR     +  S  YD  I TT+ + +   + ++K++   G 
Sbjct: 86  YALNTGNHPAPFTIKNIDNFRRQLKAMGFSYDYDKEINTTDPKFYYWTQWIFKELYKNGL 145

Query: 118 ------DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
                 D+   C      L +E     + +     G +   +    QW+       ++S 
Sbjct: 146 ASIEEVDV-NWCEGLGTVLANEEIVEKNGIKVSERGSFPVVKKPMRQWV------LKISN 198

Query: 172 YQDKLLSYYES--HPEFILPIER 192
           Y DKLL   +S   PE +  ++R
Sbjct: 199 YADKLLEGLDSLDWPESLKALQR 221



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 14/113 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIY---WPAFLL 280
           Y+ Y+    L N   T   LD+ +  K    + P DL++ G++    H +Y   W  FL 
Sbjct: 495 YLAYI----LKNSDGTYAPLDSSEAKKRFENWLPVDLYIGGQEHAVLHLLYARFWHRFLF 550

Query: 281 SANLPLPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
              +   K+ F+     G IL   G+K+SKSLGNVI+P ++I+  G DALR F
Sbjct: 551 DIGIVPTKEPFTKLINQGLILGPDGQKMSKSLGNVINPDDLIQTHGADALRIF 603


>gi|17987310|ref|NP_539944.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260563967|ref|ZP_05834453.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|81851832|sp|Q8YGX8|SYV_BRUME RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|17982990|gb|AAL52208.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260153983|gb|EEW89075.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|300088238|ref|YP_003758760.1| leucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527971|gb|ADJ26439.1| leucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 815

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 22/200 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y M  +D  AR+ R+ G +VL   G D  G     AA 
Sbjct: 33  KPKWYALTMFPYTSGDLHIGHWYAMAPSDAYARYKRMQGYNVLHPMGFDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFR----DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+  + +  +N  N R     M  V D  +D  + T    ++      + K+   G  
Sbjct: 93  KRGIHPREWTMKNVENMRKQIKSMGSVYD--WDREVITCLPEYYKWTEWFFLKLYQAGLA 150

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E    + E  +            PV+  + E +FFR++ Y 
Sbjct: 151 YRAKAPVNWCASCQTVLANEQVVGNGECERC---------EGPVEKRDLEQWFFRVTKYA 201

Query: 174 DKLLSYYE-SHPEFILPIER 192
           D+L+ +     PE I  ++R
Sbjct: 202 DELMDHEGLDWPERIKTMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 36/237 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  K ++W P D++  G +    H  Y   F        L+  + P   ++F+ G I  +
Sbjct: 521 DPEKTRYWMPVDIYTGGAEHAVMHLFYSRFFVKALRDMGLVDFSEPF-TRLFNQGTITSQ 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV++P   + E G D +R +L+        G ++  G+          GI 
Sbjct: 580 HAKMSKSRGNVVNPDRYVNEQGADTVRAYLMFVGPWELGGDWNDSGI---------GGIS 630

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
              +R   +  + Y      PG F E  E+ L       Q +R+ +   L       +++
Sbjct: 631 RWFNRVWKLATEPYQ-----PGGFDEEAEAEL--IRHTHQTVRK-VNTDLDALQFNTMLA 682

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + E   Y    K         D          + + +L ++L    P LA +++++
Sbjct: 683 ALMEFTNYLGPAK---------DSGKVSAETWKDAVNKLILMLAPTAPHLAEELWEL 730


>gi|226952305|ref|ZP_03822769.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836971|gb|EEH69354.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 945

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 31/175 (17%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K + +HGF++  KG K+SKSLGN+I P
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSIAINERAPY-KGLLTHGFVVDEKGRKMSKSLGNIITP 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFY-DKDGLKKRVNADLANGIGNLVSRSVS 367
            ++I+++G D LR+++       E+  GK+ F    DG ++             +  ++ 
Sbjct: 626 QDIIKDMGADGLRFWIASADYRYEMTAGKEIFSRASDGYRR-------------IRNTLR 672

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRV---LQEIRENMQNQLIHRAL 414
            +L + +G  P+  A         D+ IL   + V   +Q+  E M   ++  AL
Sbjct: 673 FLLANLNGFKPSSDALPVDELIALDQYILQRAAEVQKTIQQAYEEMNFHIVTNAL 727



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N Q H+GHA   ++ D++ +   LDG D  +  G D HG  I  K  
Sbjct: 57  KKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV V  ++  FR          +++   DF+R
Sbjct: 117 EKVG---KVGVKVDASTFRKACREYAYTQVELQKKDFVR 152


>gi|307822483|ref|ZP_07652714.1| leucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736087|gb|EFO06933.1| leucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 832

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 6/181 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  QDKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N    RD    L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  QHGVHPADWTYSNIDYMRDQLKRLGFGYDWNRELATCDPSYYKWEQWFFLKLLEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V    DG  +      V+  E   +F +++AY D+LL+  E
Sbjct: 152 KTAPVNWCPHDMTVLANEQVI---DGCCWRCDTQ-VERKEIAQWFLKITAYADELLASLE 207

Query: 182 S 182
           +
Sbjct: 208 T 208



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 247 NPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHG 294
           NPD      AK+W P D ++ G +    H +Y   +        LL  + P  KK+ + G
Sbjct: 525 NPDSMLDESAKYWLPVDHYIGGIEHAILHLLYARFYTKLLRDEGLLVCDEPF-KKLLTQG 583

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +L  G K+SKS GN +DP  +I++ G D +R F++
Sbjct: 584 MVLKDGSKMSKSKGNTVDPQGLIDQYGADTVRLFIM 619


>gi|163843215|ref|YP_001627619.1| valyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673938|gb|ABY38049.1| valyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|297583533|ref|YP_003699313.1| leucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297141990|gb|ADH98747.1| leucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 805

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F ++N   FR     L  SY  D  I TT+++++   + ++ ++ +KG  
Sbjct: 89  ALDTGKHPREFTEKNIETFRRQIKSLGFSYDWDREINTTDEKYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y    +  W         N++ +   ++   +  +  P+ QWM       +++ Y D+LL
Sbjct: 149 YMDEVAVNWCPALGTVLANEEVIEGKSERGGHPVEKRPMKQWM------LKITEYGDRLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEDLDWPESIKDMQR 219



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 145/354 (40%), Gaps = 62/354 (17%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           +++ + GD+ K  Y+G     D A+ N D    G D     A+   + W+E+EG   R  
Sbjct: 357 REVVEGGDVSKEAYAG-----DGAHINSD-FLNGLDNSEAIAKM--IDWLEQEGKGERKV 408

Query: 171 AYQ--DKLLS---YY--------------ESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
            Y+  D L S   Y+              E  PE  LP+    ++  F  SG  +  L+ 
Sbjct: 409 TYRLRDWLFSRQRYWGEPIPMIHWEDGSLEPVPEDELPL-TLPDMDEFKPSGTGESPLAN 467

Query: 212 KTFDWGIKIPDDPQY------IMYVWIDALTNYLTTTGYLDN------PDGSKAKFW-PA 258
                 +  P   +        M  W  +   YL    Y+D        D SK + W P 
Sbjct: 468 NEEWLHVTDPSTGRKGRRETNTMPQWAGSCWYYLR---YIDPDNDQALADPSKLREWLPV 524

Query: 259 DLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISKSLGNV 310
           D+++ G +    H +Y   W   L    +   K    K+++ G IL    EK+SKS GNV
Sbjct: 525 DIYIGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNV 584

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P ++++  G D LR + +          +  +GL         +G    + R   + +
Sbjct: 585 VNPDDILQSHGADTLRLYEMFMGPLDAAIAWSDNGL---------DGARRFLDRVWRLFV 635

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           KD DG +       +  E++  V  + ++++ E+ +    +  ++Q++  V+E 
Sbjct: 636 KD-DGALSPQIQDAQGSETMTKVYHQTVKKVTEDFKELRFNTGISQLMVFVNEA 688


>gi|92114464|ref|YP_574392.1| leucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123387387|sp|Q1QV15|SYL_CHRSD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91797554|gb|ABE59693.1| leucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 856

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 24/186 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRFQRMQGKNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
              V    +   N    R     L  +YD        R   TC +         + K+ +
Sbjct: 92  KNRVPPGAWTYDNIDAMRRQLKALGFAYD------WNREFATCDVDYYRWEQWFFTKLVE 145

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +YK   +  +   D+    +++V +G     G     +  P+       +F +++ Y
Sbjct: 146 KGLVYKKMSTVNWDPVDQTVLANEQVIEGRGWRSGALVERKEIPL-------WFLKITDY 198

Query: 173 QDKLLS 178
            D+LL+
Sbjct: 199 ADELLA 204



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 131/327 (40%), Gaps = 53/327 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR----KTFD 215
           ME   Y+ R  A  D + +  +   ++ LP++     I  ++  +  L  +R       D
Sbjct: 490 MESSWYYARF-ASADNMEAMLDERADYWLPVDL---YIGGIEHAILHLLYARFFHKLMRD 545

Query: 216 WGIKIPDDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
           +G+   D+P Q ++   +      +  T Y  N DGSK  F PAD+ V   D  R     
Sbjct: 546 FGLVASDEPFQRLLTQGM-----VIAETFYRANDDGSKDWFNPADVDVQRDDKGR----- 595

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +SA L    +    G I    EK+SKS  N +DP  +I+  G D +R F++    
Sbjct: 596 ----PVSAILREDGQPVEMGGI----EKMSKSKNNGVDPQAMIDRFGADTVRLFMMFAAP 647

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESIL 391
             +   +   G++         G    + R   ++    D   P      A  +  +++ 
Sbjct: 648 PEQSLEWSDSGVE---------GAHRFLKRLWKLVADHLDAGTPAALDADALNDDQKTLR 698

Query: 392 SVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 + +  +++ +    + A+A V+ LV+ + R+ D         T+P      L V
Sbjct: 699 RKTHETIAKASDDIGRRTTFNTAIAAVMELVNAIGRFED---------TSPQG----LAV 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           T E +    ++L   VP   + ++D L
Sbjct: 746 TREALEACVLVLAPIVPHACHALWDAL 772


>gi|46446128|ref|YP_007493.1| isoleucyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627502|sp|Q6MDY1|SYI_PARUW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46399769|emb|CAF23218.1| putative isoleucyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 1038

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 44/250 (17%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           +PAD    G D  R    ++   +LSA L   P  K V  +G IL   G K+SK L N  
Sbjct: 543 FPADFIAEGLDQTR--GWFYTLTVLSAALFDQPAMKNVIVNGLILAENGAKMSKRLKNYP 600

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           DP EVI++ G DA+R +++   A   D   + K G++             LV R + + L
Sbjct: 601 DPAEVIQQYGADAIRLYMLHSPAVKADDLSFSKSGVE-------------LVLRQILLPL 647

Query: 371 KDYDGMIPT--------PGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            +      T        PG   +      D+ I+S+ ++++ E+ + M +  + R++   
Sbjct: 648 WNAYTFFLTYARIYNWKPGKLVQKPELAIDQWIISLLNKLVHEVEQGMDDYDLSRSVEPF 707

Query: 418 ISLVSEVDRYF---DAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLAN 471
           ++ V ++  ++     ++ W+  K +P+R     T+ YV +E+ +  A     +VP ++ 
Sbjct: 708 VNFVDQLTNWYIRRSRRRFWD-DKESPNRTQAFETLYYVLIELTKISA----PYVPFISE 762

Query: 472 KIFDILFVAD 481
            I+  L   D
Sbjct: 763 AIYQNLRSCD 772


>gi|256113493|ref|ZP_05454327.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994876|ref|ZP_06107433.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765989|gb|EEZ11778.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|256369373|ref|YP_003106881.1| valyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|294852301|ref|ZP_06792974.1| valyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|255999533|gb|ACU47932.1| valyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|294820890|gb|EFG37889.1| valyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|254701707|ref|ZP_05163535.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752258|ref|ZP_05995967.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261742011|gb|EEY29937.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|254689188|ref|ZP_05152442.1| valyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256257438|ref|ZP_05462974.1| valyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754690|ref|ZP_05867038.1| valyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883716|ref|ZP_05895330.1| valyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248289|ref|ZP_06932007.1| valyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674798|gb|EEX61619.1| valyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873244|gb|EEX80313.1| valyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175458|gb|EFH34805.1| valyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRNKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|154245393|ref|YP_001416351.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159478|gb|ABS66694.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 894

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K ++     YP+ + HIGH    ++ DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 49  RPKFFVMEMFPYPSGRIHIGHGRNYVMGDVLARYKRMQGFNVLHPMGWDAFGLPAENAAI 108

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+  K +  +N  + R+   +L +S D
Sbjct: 109 ERGIHPKSWTYENIASMREQLQLLGLSLD 137



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P  V +  GVD  R+F++ +    +D  + + G++          +  
Sbjct: 646 EKMSKSKRNVVAPEVVADTYGVDCARWFMLSDTPPERDSEWTQGGIEGAWR--FVQRVWR 703

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ +V +         P P AF+ +   +      ++  + E+++    + A+A V   
Sbjct: 704 LVNEAVEL---GASAGSPRPDAFSPTALGLRRAAHGLVATVAEDIERLRFNVAVAHVHEF 760

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +         +    +K  P   + + +   E    LA ++   VP LA + +  L
Sbjct: 761 ANAFGSAIAVAR---AEKAVP---ADLAFALREAAEMLASVVAPMVPHLAEECWVAL 811


>gi|281358130|ref|ZP_06244614.1| valyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315503|gb|EFA99532.1| valyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 886

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 134/314 (42%), Gaps = 47/314 (14%)

Query: 204 LKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALT-----------------NYLTTTG 243
           ++D  +SR+ + WG +IP   +D    +YV ++A T                 ++L    
Sbjct: 403 IQDWCISRQIW-WGHRIPAWYNDENGEVYVGLEAPTAPGKWRQEEDVLDTWFSSWLWPFS 461

Query: 244 YLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV------FSHGF 295
            +  P  +     F+P    V G DI+ F    W A ++ A     K++      F+   
Sbjct: 462 IMGWPKETPELKYFYPTCDLVTGPDIIFF----WVARMIMAGCEFMKEIPFRNVYFTSII 517

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN  DP++VI   G DALR+ +V     G D  Y  +  K  +    A
Sbjct: 518 RDEQGRKLSKSLGNSPDPLDVIATYGADALRFTIVYIAPVGMDIRYSNE--KCEIGKTFA 575

Query: 356 NGIGNLV--SRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHR 412
           N + N     +    + K++  +     A    DE  +L+     ++ I   +     H 
Sbjct: 576 NKLWNACRFRQMQGEVSKEFRELPADVAANLSGDERWMLARLDATIESINAALAEFRFHS 635

Query: 413 ALAQVISLV--SEVDRYFDAQK-PWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPK 468
           A  ++  LV  S  D + +A+K P        +RA TVL Y    ++R    LL  F+P 
Sbjct: 636 AAHELYELVWTSFCDWFIEAEKVPMRAGGAEKERALTVLDYALFRILR----LLHPFMPF 691

Query: 469 LANKI-FDILFVAD 481
           +  ++   + FVA+
Sbjct: 692 ITEELAHQMGFVAE 705



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 26/166 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------QKIAK 60
           S  I  PN      +GH     + D+L R+HR+ G +V +  GTD  G       +K  +
Sbjct: 42  SIVIPPPNVTGILTLGHVLNNTLQDILCRYHRMKGEEVCWFPGTDHAGIATEARVEKYLR 101

Query: 61  AAQNAG--------VTTKV------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +N G           +V      F  +  R  R +    D   + F  T ++   +  
Sbjct: 102 KEENTGRDELGREEFIRRVWQWKGEFGGKIIRQLRTLGCSCDWERERF--TMDEGLSEAV 159

Query: 107 RILWKKISDKGDIYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYN 151
           + ++ ++ +KG IY+G     W  +   A  +++ +YK   G +++
Sbjct: 160 KKVFVELYNKGYIYRGQRMINWCPVAKSALSDEEVIYKDVAGHFWH 205


>gi|89074967|ref|ZP_01161412.1| leucyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89049206|gb|EAR54770.1| leucyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 857

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   S  +   D     +++V    DG  +     PV+  E   +F +++ Y  +L   L
Sbjct: 151 KKTSSVNWCPNDLTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 178 SYYESHPEFILPIER----RNEVI--SFVKSGLKDLSL 209
              E  PE +  ++R    R+E +  +F   G  DL +
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEGVELTFNVKGQDDLEV 244


>gi|89899568|ref|YP_522039.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123091480|sp|Q220P5|SYL_RHOFD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89344305|gb|ABD68508.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 892

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +     + ++ D    + T +  ++   + L+ K+ DKG  Y+
Sbjct: 92  KNGVPPAQWTFENIAYMKQQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLDKGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +      V+  E  GY+ +++ Y ++LL   +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGKGWRTGAT-VEKREIPGYYLKITDYAEELLGQVQ 207

Query: 182 S 182
           +
Sbjct: 208 T 208


>gi|319405909|emb|CBI79541.1| Valyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 907

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 27/273 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPA----- 277
           Q ++  W  +     +T G+   PD +     F+P  L V G DI+ F    W A     
Sbjct: 476 QDVLDTWFSSALWPFSTLGW---PDKTIELTTFYPTSLSVTGFDIIFF----WVARMMMM 528

Query: 278 -FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P P  V+ H  +  + G K+SKS GN++DP+E+I++ G DALR+ L    A 
Sbjct: 529 GMHFMGEVPFPT-VYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMAAQ 587

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL--VSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           G+D   D   +     A   N +  L   +R   M    +D            +  IL+ 
Sbjct: 588 GRDVKLDPSRV-----AGYRNFVTKLWNATRFAEMNGVRHDLSFKPEKTKLAINRWILTE 642

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            S+ +  + + ++N   + A   +   +  +  D Y +  KP   + ++ D        T
Sbjct: 643 LSKTVSAVTKGIENYKFNDAAQALYRFIWHALCDWYLELLKP-IFQGSDEDSKKEAQACT 701

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
             V+ ++  LL  F+P +  +++ +  + D  R
Sbjct: 702 AWVLDEVYKLLHPFMPHVTEELWSLTAMQDLKR 734



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D++ RF R+ G +VL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNTTIQDIIVRFQRMQGKNVLWQPGMD-----------HAGIATQMVVERQLAER 100

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           ++ A   ++  + FI    K  H+   I+  ++   G
Sbjct: 101 QEPAR-QEMGREKFIERVWKWRHEAGGIITNQLKRLG 136


>gi|317148825|ref|XP_001822941.2| leucyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 948

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 41  EKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 101 IERGIDPAEWTKDNIARMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYKKGLAY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +  + +FFR++ +++ LL+  
Sbjct: 161 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFRITDFKEALLNDL 217

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 218 DSLAGGWPERVLSMQR 233


>gi|307126771|ref|YP_003878802.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483833|gb|ADM90702.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 883

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|302341853|ref|YP_003806382.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638466|gb|ADK83788.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 937

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 31/239 (12%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           WPAD+++ G D  R  FH+    A       P  ++V +HGF++   G K+SKSLGNVI 
Sbjct: 555 WPADMYLEGSDQHRGWFHSSLLCAMATRGAAPY-RQVLTHGFVVDGDGRKMSKSLGNVIA 613

Query: 313 PIEVIEEVGVDALRYFLVRE-----IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           P +VI++ G + LR ++  E     I    D         +R+   +   +GN       
Sbjct: 614 PQKVIDQYGAEILRLWVAAEDYTVDIRLSNDILKQLAEAYRRIRNTMRFMLGN------- 666

Query: 368 MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSE 423
             L D+D       P    + D  +L     ++  +R+  ++   H     +    +V  
Sbjct: 667 --LHDFDPQAHAVAPDQMGQMDRLMLHRLQELIGRVRKGYEDFAFHACFHGLHNYCVVDL 724

Query: 424 VDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              Y D  K   L    PD      A TVLY T+  + +LA  + +F    A +++D L
Sbjct: 725 SGFYLDVLKD-RLYTCAPDDPARRAAQTVLYHTLSAMVRLAAPILSFT---AEEVWDYL 779



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           R K  +     Y N   H+G A+  ++ D + +  ++ G D ++  G D HG  I  +  
Sbjct: 47  RPKFILHDGPPYANGNIHMGTAFNKVLKDFIVKSRQMAGFDAVYVPGWDCHGLPIEYQVT 106

Query: 63  QNAG--VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +N G     K  +D   R  +     +DI  D+F+R
Sbjct: 107 KNLGDEACHKSQIDIRRRCRKYAEKYIDIQRDEFVR 142


>gi|262282776|ref|ZP_06060544.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262067|gb|EEY80765.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 882

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 442 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 501

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 502 PF-KNALIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVRFSY 560

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +    N    N I N +SR    IL + +G+         + E   +   +V  +   
Sbjct: 561 EKMDASWN--FINKIWN-ISR---YILMNNEGL---------TLEQATANVEKVANKEAG 605

Query: 404 NMQNQLIHRALAQVISLVSE 423
           N+ ++ I   L + I  V+E
Sbjct: 606 NVTDRWILHNLNETIGKVTE 625



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 39  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 98

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+             + +  M   +D S + F  T ++      R
Sbjct: 99  GEGISRYDLGREKFLDKVWEWKDEYATTIKQQWGKMGLSVDYSRERF--TLDEGLSKAVR 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++ ++  KG IY+G +   +  +     +D EV +K  +G +Y+  +
Sbjct: 157 KVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNY 204


>gi|254509830|ref|ZP_05121897.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533541|gb|EEE36529.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 1022

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 12/110 (10%)

Query: 235 LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            ++ L   G L  P+ ++   +++P D+ + G DIL F    W A ++   L +  +V  
Sbjct: 593 FSSGLWPIGTLGWPEQTEELERYFPTDVLITGFDILFF----WVARMMMMQLAVVDQVPF 648

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           H   LH      KG+K+SK+ GNVIDP+E+++E G DALR+      A G
Sbjct: 649 HTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADALRFTNASMAAIG 698



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA+   + D+L R+HR+ G D L+  G D  G
Sbjct: 52 HVGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAG 86


>gi|218659289|ref|ZP_03515219.1| methionyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 40

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 31/40 (77%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL 40
          M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RL
Sbjct: 1  MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRL 40


>gi|196033846|ref|ZP_03101257.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|228945806|ref|ZP_04108152.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|195993526|gb|EDX57483.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|228813871|gb|EEM60146.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 1033

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|62289887|ref|YP_221680.1| valyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699815|ref|YP_414389.1| valyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024129|ref|YP_001934897.1| valyl-tRNA synthetase [Brucella abortus S19]
 gi|237815382|ref|ZP_04594380.1| valyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254697324|ref|ZP_05159152.1| valyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730222|ref|ZP_05188800.1| valyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260545368|ref|ZP_05821109.1| valyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260757914|ref|ZP_05870262.1| valyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761736|ref|ZP_05874079.1| valyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196019|gb|AAX74319.1| ValS, valyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615916|emb|CAJ10922.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Valyl-tRNA synthetase, class Ia [Brucella melitensis
           biovar Abortus 2308]
 gi|189019701|gb|ACD72423.1| valyl-tRNA synthetase [Brucella abortus S19]
 gi|237790219|gb|EEP64429.1| valyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096775|gb|EEW80650.1| valyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668232|gb|EEX55172.1| valyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672168|gb|EEX58989.1| valyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRNKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|23501832|ref|NP_697959.1| valyl-tRNA synthetase [Brucella suis 1330]
 gi|254704249|ref|ZP_05166077.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754917|ref|ZP_05998626.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|81752694|sp|Q8G0Y3|SYV_BRUSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23347767|gb|AAN29874.1| valyl-tRNA synthetase [Brucella suis 1330]
 gi|261744670|gb|EEY32596.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|254714044|ref|ZP_05175855.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716899|ref|ZP_05178710.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261218703|ref|ZP_05932984.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261321799|ref|ZP_05960996.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260923792|gb|EEX90360.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294489|gb|EEX97985.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALIRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|254706849|ref|ZP_05168677.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710043|ref|ZP_05171854.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031538|ref|ZP_05445152.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159673|ref|ZP_05457426.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254941|ref|ZP_05460477.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222125|ref|ZP_05936406.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314312|ref|ZP_05953509.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317591|ref|ZP_05956788.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|265988625|ref|ZP_06101182.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998090|ref|ZP_06110647.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920709|gb|EEX87362.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261296814|gb|EEY00311.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303338|gb|EEY06835.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|262552558|gb|EEZ08548.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660822|gb|EEZ31083.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|225852457|ref|YP_002732690.1| valyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264051|ref|ZP_05466583.1| valyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640822|gb|ACO00736.1| valyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094236|gb|EEZ18113.1| valyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408971|gb|ADZ66036.1| valyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538685|gb|ADZ86900.1| valyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|83771678|dbj|BAE61808.1| unnamed protein product [Aspergillus oryzae]
          Length = 988

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 81  EKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 140

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 141 IERGIDPAEWTKDNIARMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYKKGLAY 200

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +  + +FFR++ +++ LL+  
Sbjct: 201 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFRITDFKEALLNDL 257

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 258 DSLAGGWPERVLSMQR 273


>gi|302389340|ref|YP_003825161.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199968|gb|ADL07538.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 817

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 92/227 (40%), Gaps = 21/227 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 30  KKPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKRMKGYNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N  N R     L +SY  D  I T    ++   +  + K+ + G  Y
Sbjct: 90  IKHGVHPARWTWDNIANMRKQLKQLGLSYDWDREIATCHPGYYKWTQWFFLKLYEMGLAY 149

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           +       C S    L +E   +      GA+      + N  QW      FF+++ Y D
Sbjct: 150 RKKSFVNWCPSCATVLANEQVVDGRCERCGAE----VGKKNLEQW------FFKITEYAD 199

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +LL   +  P +   ++   E       G++    + KT   G KIP
Sbjct: 200 QLLEDLKKLPGWPEKVKVMQENWIGRSEGVEVYFTAEKT---GEKIP 243



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  K ++W P D ++ G +    H +Y   F        L+  + P    + + G +L  
Sbjct: 520 DREKLEYWMPVDQYIGGVEHAILHLMYSRFFNKVMRDAGLVYVDEPF-ANLLTQGMVLKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN++ P E+IE+ G D  R F++      KD  +   G++         G  
Sbjct: 579 GAKMSKSKGNIVSPEEIIEKYGADTARLFILFASPPEKDLEWSDQGVE---------GCH 629

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R V  ++++    +  P A    D  +  +  + ++++ E+++ +         IS
Sbjct: 630 RFLQR-VWRLVEELGPRVKDPVADERLDREVRRLVHKTIKKVTEDIEERF---NFNTAIS 685

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + E+    +++K  E   + P        V  E +  L ++L  F P +  ++++ L
Sbjct: 686 AIMEMVNALNSRK--EESISGP--------VIKEALENLLVMLAPFAPHITEELWERL 733


>gi|161618903|ref|YP_001592790.1| valyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566502|ref|ZP_05836972.1| valyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335714|gb|ABX62019.1| valyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156020|gb|EEW91100.1| valyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|161611245|ref|YP_004677.2| isoleucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|84029575|sp|Q72JR6|SYI_THET2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1043

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+      +  Y      +  + +PAD    G D  R  F++++    +L  +
Sbjct: 513 YVIDVWYDSGAMPFASLHYPFEHQETFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGS 572

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +   K V  HG IL  KG+K+SKS GNV+DP ++I E G DALR+++        D  + 
Sbjct: 573 IAF-KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYVSAPPEADRRFG 631

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
            + +++ V  D    + N+ S  V+    D   +   P P    E D  +L+    ++Q 
Sbjct: 632 PNLVRETVR-DYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQR 690

Query: 401 IRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           + E ++        RAL   +  V ++ +++  +      K          Y T+ E + 
Sbjct: 691 VTEALEAYDPTTSARALRDFV--VEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALV 748

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +A L   F P LA  ++  L
Sbjct: 749 LVATLAAPFTPFLAEVLWQNL 769


>gi|239831824|ref|ZP_04680153.1| valyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824091|gb|EEQ95659.1| valyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|254693672|ref|ZP_05155500.1| valyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213941|ref|ZP_05928222.1| valyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915548|gb|EEX82409.1| valyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRNKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|325697851|gb|EGD39735.1| leucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 861

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KAKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 230

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 231 LLNDLEELDWPESIKDMQR 249


>gi|306840459|ref|ZP_07473218.1| valyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289474|gb|EFM60692.1| valyl-tRNA synthetase [Brucella sp. BO2]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|256828301|ref|YP_003157029.1| isoleucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577477|gb|ACU88613.1| isoleucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 936

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +G     +PADL++ G D  R  FH+    A + +  +
Sbjct: 535 ILDVWFDSGTSFAAVV------EGRPECSFPADLYLEGTDQHRGWFHSSLL-ASMGTRGV 587

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  + V +HGF+L  +G K+SKS+GNV+ P E+IE+ G + LR ++  E
Sbjct: 588 PPYRTVLTHGFVLDGQGRKMSKSIGNVVAPQEIIEKHGAEVLRLWVASE 636



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ DV+ +   L G    +  G D HG  I  K  Q  G      +
Sbjct: 59  YANGHIHIGHAMNKILKDVIVKHRNLTGRQAQYVPGWDCHGLPIELKVEQELGGKNMFSI 118

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR 96
            +  +  R+ A   LDI  ++F R
Sbjct: 119 LEIRKKCREYALKYLDIQREEFKR 142


>gi|15605834|ref|NP_213211.1| isoleucyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226181|sp|O66651|SYI_AQUAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2983002|gb|AAC06614.1| isoleucyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 956

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 28/205 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL---SAN 283
           I+ VW D+  ++         P G    F  ADL++ G D    H  ++ A LL    + 
Sbjct: 555 ILDVWFDSGCSHAAVI----RPLG----FQKADLYLEGSDQ---HRGWFQASLLESVGSY 603

Query: 284 LPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-----IACG 336
           L  P K V +HGFI+  KG K+SKSLGNVI P EV++E G D LR ++V E     +  G
Sbjct: 604 LEAPYKAVLTHGFIVDEKGRKMSKSLGNVISPQEVVKEFGADILRLWVVSEDYTEDVKLG 663

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           K+         +++   L   IGNL   +       ++ +          D  I+S    
Sbjct: 664 KNLLKKIADDYRKIRNTLRFIIGNLYDFNPRTNALPFEKL-------HHFDRWIISELQN 716

Query: 397 VLQEIRENMQNQLIHRALAQVISLV 421
           +L+++ EN +  L +R    + + V
Sbjct: 717 LLKKVHENYEKFLFYRVHNHIKNFV 741



 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K RE   +     Y N   H+GHA   I+ DV+ +++ L G +V F  G D HG  I +A
Sbjct: 48  KGREVFVLHDGPPYANGHIHVGHALNKILKDVINKYNLLIGKNVNFIPGWDCHGLPIERA 107

Query: 62  AQNAGVTTKVFVDQNSRN-FRDMA-----DVLDISYDDFIR 96
            +      K+  +   +  FR++        ++I  +DF+R
Sbjct: 108 VEKELSKKKIKKESLPKTEFRELCREYAKKYVNIQREDFVR 148


>gi|309799376|ref|ZP_07693618.1| leucyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116991|gb|EFO54425.1| leucyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 419

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|218680173|ref|ZP_03528070.1| isoleucyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 408

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 175 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 228

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 229 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 274


>gi|218290418|ref|ZP_03494548.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239546|gb|EED06740.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 801

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 44/232 (18%)

Query: 255 FW-PADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +W P D+++ G +    H +Y        +   L+  + P  +++F+ G I   G K+SK
Sbjct: 521 YWLPVDMYIGGVEHAVLHLLYSRFYVKFIYDLGLIDFDEPF-QRLFTQGMITLNGAKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P ++I   GVDALR + +      +D  +  +GL+         G+   ++R 
Sbjct: 580 SKGNVVNPDDIIARYGVDALRMYEMFVGPPEEDAEWSTNGLE---------GVARFLARV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +  +  D ++P          S+  +  R +  + E M++  ++ A++  +  V+ + 
Sbjct: 631 YRLYAQQVDKLVP-------ERPSLTKLRHRFVATLTERMESFRLNTAVSAFMEYVNNLQ 683

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                    +  K   DRA+         +  LAI +  F P L  +++++L
Sbjct: 684 ---------QEAKDGLDRAT---------LETLAIAIAPFTPHLGEELWEML 717



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 7/178 (3%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+    H+GH     I+DV +R+ +L G ++L   G D  G      A
Sbjct: 30  KPKYYCLDMFPYPSGSGLHVGHWRGYTISDVWSRYKKLHGYEILHPMGWDAFGLPAENYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  ++  +QN  NF+   + +   Y  D  + TT+   +   +  + K+ ++G  Y
Sbjct: 90  IQNGIHPRIATEQNIANFKRQLEEIGAMYDWDREVNTTDPSFYKWTQYFFVKMFERGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +      +    +    ++EV  G           PV   E E +  +++ Y D+LL+
Sbjct: 150 RKKMPINWCPSCKTGLANEEVVDGC----CERCGAPVTRREMEQWMLKITDYADRLLN 203


>gi|206602308|gb|EDZ38789.1| Valyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 904

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 23/153 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           K+  DP  ++  W  +      T G+ +N PD  +  F+P  L V G DIL     +W A
Sbjct: 456 KLTADPD-VLDTWFSSALWPFVTLGWPENTPDFQR--FYPTSLLVTGFDIL----FFWVA 508

Query: 278 FLLS-----ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++         P  + V+ H  +  + G+K++KS GNV+DP+E+++  G DA R  LV 
Sbjct: 509 RMVMMGYHFTGKPPFRDVYIHALVRDQFGQKMTKSKGNVVDPLEIMDRYGTDAFRMTLVH 568

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
             + G+D          R++ +   G  N VS+
Sbjct: 569 MASPGRD---------IRLSTERVEGFRNFVSK 592



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           S  I  PN   + H+GHA  + + DV+ARF +++G DVL+  GTD  G
Sbjct: 53  SMVIPPPNITGRLHMGHALNITLQDVVARFRKMEGQDVLWIPGTDHAG 100


>gi|324328635|gb|ADY23895.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 802

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|319780907|ref|YP_004140383.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166795|gb|ADV10333.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 874

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 122/324 (37%), Gaps = 52/324 (16%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN    R+   V+ +S D   +F  T +  ++   ++L+    +KG + 
Sbjct: 93  QNKVHPKEWTYQNIATMREQLKVMGLSLDWAREFA-TCDVDYYHRQQMLFLDFVEKGLVM 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    DG+ + +    V+  E   +FFR++ +   LL   
Sbjct: 152 RKSSKVNWDPEDMTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFRITDFAQDLLDSL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E   E+                                  P+  + +   WI      L 
Sbjct: 208 EGLDEW----------------------------------PEKVKLMQQNWIGRSEGLLI 233

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL-LSANLPLPKKVFSHGFILHK 299
                D  DG          H +     R   I+  +F+ ++A+ PL KK  +H   L K
Sbjct: 234 RWPLADASDGE---------HELEVYTTRPDTIFGASFMAVAADHPLAKKAAAHNPALAK 284

Query: 300 GEKISKSLGNVIDPIEVIEEVGVD 323
             +    +G  +  +E  E+ G D
Sbjct: 285 FIEDIGHMGTSVAALETAEKKGFD 308



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 16/182 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P ++ +  G D  R+F++ +    +D  +  DG      A  A+    
Sbjct: 629 EKMSKSKKNTVSPEDITDGYGADTARWFMLSDSPPERDVEWTDDG------AAGAHRFIQ 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVIS 419
            + R VS   +   G+ P   A +  + +++S    ++L+ + E+++    +RA+A++  
Sbjct: 683 RIWRLVSTAAETLAGIKPV--AASSGEAAVVSKAAHKILKAVGEDIEKLAFNRAIARIYE 740

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + +    +     E+ +   D A  +     + +  L  L+   +P LA + +  L  
Sbjct: 741 LANALTTPLN-----EVAEGKADAA--LKGACRQAVEILVHLIAPVMPHLAEECWATLGG 793

Query: 480 AD 481
            D
Sbjct: 794 TD 795


>gi|306843842|ref|ZP_07476439.1| valyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275843|gb|EFM57563.1| valyl-tRNA synthetase [Brucella sp. BO1]
          Length = 910

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|58699049|ref|ZP_00373891.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534443|gb|EAL58600.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 236

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 25  KQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           ++  ++ +++  +N  N R     + +SY+
Sbjct: 85  RDNNISPEIWTKENIDNMRAQLKSIGLSYN 114


>gi|294648748|ref|ZP_06726207.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825362|gb|EFF84106.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 945

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 31/175 (17%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K + +HGF++  KG K+SKSLGN+I P
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSIAINERAPY-KGLLTHGFVVDEKGRKMSKSLGNIITP 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFY-DKDGLKKRVNADLANGIGNLVSRSVS 367
            ++I+++G D LR+++       E+  GK+ F    DG ++             +  ++ 
Sbjct: 626 QDIIKDMGADGLRFWIASADYRYEMTAGKEIFSRASDGYRR-------------IRNTLR 672

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRV---LQEIRENMQNQLIHRAL 414
            +L + +G  P+  A         D+ IL   + V   +Q+  E M   ++  AL
Sbjct: 673 FLLANLNGFKPSTDALPVDELIALDQYILQRAAEVQKTIQQAYEEMNFHIVTNAL 727



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N Q H+GHA   ++ D++ +   LDG D  +  G D HG  I  K  
Sbjct: 57  KKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV V  ++  FR          +++   DF+R
Sbjct: 117 EKVG---KVGVKVDASTFRKACREYAYTQVELQKKDFVR 152


>gi|75763436|ref|ZP_00743161.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903260|ref|ZP_04067392.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967845|ref|ZP_04128857.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74489075|gb|EAO52566.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228791811|gb|EEM39401.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856361|gb|EEN00889.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|256061046|ref|ZP_05451202.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325047|ref|ZP_05964244.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301027|gb|EEY04524.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 910

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDK-TPELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|225856278|ref|YP_002737789.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225724382|gb|ACO20234.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 883

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|238494030|ref|XP_002378251.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220694901|gb|EED51244.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 960

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 9/196 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 81  EKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 140

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 141 IERGIDPAEWTKDNIARMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYKKGLAY 200

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +  + +FFR++ +++ LL+  
Sbjct: 201 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFRITDFKEALLNDL 257

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 258 DSLAGGWPERVLSMQR 273


>gi|218903317|ref|YP_002451151.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218534804|gb|ACK87202.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 1033

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|84489310|ref|YP_447542.1| valyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372629|gb|ABC56899.1| ValS [Methanosphaera stadtmanae DSM 3091]
          Length = 879

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    LT   +   P+      +PA L   G DI+R  A Y     + L+   
Sbjct: 455 VLDTWMDSSITPLTIANW---PNEGWENVYPATLRPQGHDIIRTWAFYTILRCYALTGEK 511

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKSLGNVI P EVIEE G DALR +    +      F  KD
Sbjct: 512 PFDEIVVNGMVFGEDGHKMSKSLGNVIAPEEVIEEYGADALRLWSANSVPGADVPFGWKD 571



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          I T   YP  + H+GH    +  D++AR+ R++  DVLF  G D HG
Sbjct: 41 IDTPPPYPTGKLHMGHVLNWVYMDIIARYKRMNNFDVLFPQGWDCHG 87


>gi|52143260|ref|YP_083569.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81688177|sp|Q63BZ8|SYI2_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 2; AltName: Full=IleRS 2;
           AltName: Full=Isoleucine--tRNA ligase
 gi|51976729|gb|AAU18279.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 1033

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRIALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|49477540|ref|YP_036324.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81396231|sp|Q6HJF2|SYI2_BACHK RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|49329096|gb|AAT59742.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 1033

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFTKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|162147547|ref|YP_001602008.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545652|ref|YP_002277881.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786124|emb|CAP55706.1| Valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533329|gb|ACI53266.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 898

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P D+ V G DI+     +W A ++   L  
Sbjct: 469 VLDTWFSSALWPFSTLGWPEQ-TAELARYYPTDVLVTGFDII----FFWVARMMMMGLHF 523

Query: 287 PK-----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K      VF HG +   +G+K+SKS GN IDP++++E+ G DA+R+ +      G+D
Sbjct: 524 MKDVPFRTVFIHGLVRDERGQKMSKSKGNGIDPLDMVEQYGADAMRFTVCALTGLGRD 581



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA  M + D L R+ R+ G D L+  GTD           +AG+ T++ V++ 
Sbjct: 50 HVGHALTMTLQDTLIRWRRMQGRDTLWQPGTD-----------HAGIATQMVVERT 94


>gi|197117918|ref|YP_002138345.1| valyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197087278|gb|ACH38549.1| valyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 888

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 49/351 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ +++   ++ L   +     I+P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WYVKVAPLAERALGAVKDGRTKIVPQQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWY 419

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP                ++  W  +     +T G+ +      A F+
Sbjct: 420 CDHCGHITVAKEDPTCCDECGSDEIRQETDVLDTWFSSALWPFSTMGWPEKTP-ELASFY 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNV 310
           P    + G DIL F    W A ++   L    +V      +H      +G+K+SKS GNV
Sbjct: 479 PTSCLITGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVRDAQGQKMSKSKGNV 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ VI+  G DA R+ L    A G+D    ++ +    N   AN I N  SR   M L
Sbjct: 535 IDPLTVIDAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMMNL 591

Query: 371 KDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE-VDR 426
           + +D     P +   + +D  IL   ++    +   + +   + A   +     SE  D 
Sbjct: 592 EGFDPNRVDPASLKLSNADRWILYRLNQTAVSVDAALGSFRFNEAANDLYRFTWSEFCDW 651

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y +  K  +L K + DR ++  YV   V+  L  LL  F+P +  +I+  L
Sbjct: 652 YIELAKD-DLYKGDADRQASAKYVLWLVLENLLRLLHPFMPFITEEIWQAL 701


>gi|323699090|ref|ZP_08111002.1| leucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459022|gb|EGB14887.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 833

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 12/196 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKTMQGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +  QN    R     L  SYD    I T    ++   ++ + +  +KG  Y 
Sbjct: 93  KHETHPATWTYQNIAEMRAQLKRLGYSYDWRREIATCRPEYYKWEQMFFLRFLEKGLAYR 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W    +    N+    +  DG  +      V+  + E +F R++ Y D+LL+  
Sbjct: 153 KDSPQNWCPTCNTVLANE----QVEDGLCWRCDTE-VEQKDMEQWFLRITDYADELLADL 207

Query: 181 ES----HPEFILPIER 192
           +S     PE +L ++R
Sbjct: 208 DSLEGGWPERVLTMQR 223



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 36/184 (19%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L  G K+SKS GNV+DP  +I + G DA R F++      K+  +   G+   
Sbjct: 577 LLTQGMVLKDGGKMSKSKGNVVDPNAMINQYGADATRLFILFASPPVKELEWSDQGI--- 633

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP-TPGA-------------FTESDESILSVCS 395
                 +G    +SR   ++ +  D + P  PG+             F E D        
Sbjct: 634 ------DGAYRFLSRLWRLVEELEDVLTPMMPGSHDKPANDAAKGLRFKEHD-----TIR 682

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R  ++I    Q    +  +A ++ LV+E+ +  D     ELK+T+P   S+ +   V ++
Sbjct: 683 RTTRDIENEFQ---FNTVIAAIMELVNELYQVKD-----ELKETDPAALSSAIATAVTLL 734

Query: 456 RQLA 459
             +A
Sbjct: 735 SPVA 738


>gi|308174705|ref|YP_003921410.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607569|emb|CBI43940.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554634|gb|AEB25126.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328913042|gb|AEB64638.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 804

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKHNIDNFRRQIQSLGFSYDWDREINTTDPDYYKWTQWIFTKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEDLDWPESIKDMQR 219



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 21/180 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL    EK+SK
Sbjct: 520 KWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P E++   G D LR + +          + + GL         +G    + R 
Sbjct: 580 SRGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---------DGARRFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             + +++   +    G  TE + E++  V    + ++ EN +    +  ++Q++  ++E 
Sbjct: 631 WRLFIEENGELT---GKVTEGAGETLERVYHETVMKVTENYEALRFNTGISQLMVFINEA 687


>gi|158424439|ref|YP_001525731.1| valyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158331328|dbj|BAF88813.1| Valyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 926

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 12/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +     +T G+ D     K KF+P  + V G DI+     +W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTMGWPDETAELK-KFYPTSVLVTGFDII----FFWVARMMMMGLEF 549

Query: 286 ----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +P K V+ H  +   KG K+SKS GNVIDP+++I + G DALR+ L    A G+D
Sbjct: 550 MDGEVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLINQYGADALRFTLAAMAAQGRD 608



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+LARF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTLQDILARFERMRGKDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERQ 96


>gi|114566494|ref|YP_753648.1| isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318441|sp|Q0AYC7|SYI_SYNWW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114337429|gb|ABI68277.1| Isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 927

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ ++++         +  +   WP+D+++ G D  R  F++    A  +    
Sbjct: 527 IMDVWFDSGSSHMAVL------EPRQELRWPSDMYLEGSDQHRGWFNSSLSTAVAIRGAA 580

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  ++V +HGF++  +G K+SKSLGNV+DP+ +  E+G D LR ++
Sbjct: 581 PY-REVLTHGFVVDEQGRKMSKSLGNVVDPLRMTREMGADILRLWV 625



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           R +  +     Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I + A 
Sbjct: 50  RPQFILHDGPPYANGNIHLGHTLNKVLKDIIVKYRSMSGYDSPYIPGWDTHGLPIEQQAI 109

Query: 63  QNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIR 96
           +N G+   K  V +   + RD A   ++I  + F R
Sbjct: 110 KNLGIDRHKTDVVEFREHCRDYALKYVEIQKEQFKR 145


>gi|307704026|ref|ZP_07640958.1| valyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622417|gb|EFO01422.1| valyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 883

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDSSWN--FINKIWN-ISRYILM 583



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|148828098|ref|YP_001292851.1| leucyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166231612|sp|A5UI62|SYL_HAEIG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148719340|gb|ABR00468.1| leucyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 861

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|254719043|ref|ZP_05180854.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984035|ref|ZP_06096770.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306840069|ref|ZP_07472855.1| valyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662627|gb|EEZ32888.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306404797|gb|EFM61090.1| valyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 910

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +   A ++P  + V G DIL F    W A ++   L
Sbjct: 478 VLDTWFSSALWPFSTLGW---PDKTPELATYYPTSVLVTGFDILFF----WVARMMMMGL 530

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 531 HFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|164660792|ref|XP_001731519.1| hypothetical protein MGL_1702 [Malassezia globosa CBS 7966]
 gi|159105419|gb|EDP44305.1| hypothetical protein MGL_1702 [Malassezia globosa CBS 7966]
          Length = 1087

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 18/282 (6%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +N D  K  F PAD    G D  R  F+ +      L    P    + S   +   G+K
Sbjct: 553 FENTDTFKQSF-PADFISEGLDQTRGWFYTLLILGTHLFGEAPWKNLIVSGLVLAADGKK 611

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGN- 360
           +SKSL N  DP  VI + G DA+R +++   I   ++  + ++G+K  + +     + + 
Sbjct: 612 MSKSLRNFPDPTLVINKYGADAVRLYMINSPIVRAENLRFREEGVKDIIASVFLPWLNSF 671

Query: 361 -LVSRSVSMILKDYD-GMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALA 415
             +   V+++ KD     +  P A       D  IL+ C  +++ +RE + N  ++  + 
Sbjct: 672 RFLLAQVTLLKKDTGIDFVYNPHAKVSGNVMDRWILARCQSLIECVREELGNYRLYTVVP 731

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +++++++E+  ++       LK  N P+   + L    E +  L + + +F P +   ++
Sbjct: 732 RLLTMINELTNWYIRFNRRRLKGENGPEDTISALNSLFETLYTLCLTMSSFTPFITENLY 791

Query: 475 DIL--FVADENRCFQSLDQRLKPGFMLHKT-----FDPIFPR 509
             L  F+   +    + + R    F+L  +      DP+  R
Sbjct: 792 QGLRKFMPPSSSADPNTEDRRSVHFLLFPSVKEEYLDPVIQR 833


>gi|116250663|ref|YP_766501.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255311|emb|CAK06386.1| putative isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 982

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 585 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 638

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 639 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 684



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKIE 113

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRT----------TEKRHHDTCR 107
            K  +      +V V++  R  R+  A  + +  ++F R           T    H   R
Sbjct: 114 EKYREKGKNKDEVPVNEFRRECREFAAGWIKVQAEEFKRLGIEGDFDNPYTTMNFHAESR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEV 209


>gi|39997307|ref|NP_953258.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|60390724|sp|Q74AZ0|SYL_GEOSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39984198|gb|AAR35585.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 824

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G     +  +N    R     + +SYD    + T +  ++   + ++ ++ +KG +Y 
Sbjct: 92  KHGSHPAKWTYENIDYMRSQLKKMGLSYDWGRELATCDVDYYKWEQKMFLEMYEKGLVYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K  +  W    +    N+    +  DG  +    +  Q  E + +FFR++ Y ++LL   
Sbjct: 152 KSSFVNWCPACETVLANE----QVEDGCCWRCDSDVTQ-KELDQWFFRITRYAEELLEDT 206

Query: 179 -YYESHPEFILPIER 192
                 PE +L ++R
Sbjct: 207 WNLPGWPERVLVMQR 221



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 28/239 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D ++A +W P D ++ G +    H +Y   F         ++   P  K + + G ++  
Sbjct: 520 DRARAGYWMPVDQYIGGIEHAVLHLLYSRFFTKALRDLGYVTVAEPF-KNLLTQGMVIKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP  +IE  G D  R F +      KD  +   G++        N + 
Sbjct: 579 GAKMSKSKGNVVDPDALIERYGADTARLFTLFAAPPEKDLDWSDQGVEGSFR--FLNRVW 636

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            LV   +  I        P P A  +    +     + ++++ +++  +   + A++ V+
Sbjct: 637 RLVFEVLPFI---GSAGKPDPAALGDGARDLRRTVHKTIRKVTDDLDERFHFNTAISAVM 693

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LV+ +  +             P  A     V  E +  +  LL  FVP +A ++++ L
Sbjct: 694 ELVNAIQSF------------EPKNAPENAPVLREAVESVVQLLAPFVPHVAEELWESL 740


>gi|228923497|ref|ZP_04086779.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836135|gb|EEM81494.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|299822786|ref|ZP_07054672.1| valine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816315|gb|EFI83553.1| valine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 884

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 10/153 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D  +     F+P ++ V G DI+ F    + + +   + + 
Sbjct: 451 VLDTWFSSGLWPFSTMGWPDTENEDYKHFFPTNVLVTGYDIIFFWVSRMIFQSLEFTGHK 510

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    +  HG +   +G K+SKSLGN +DPIEVI++ G D+LRY L    + G+D  +  
Sbjct: 511 PFNDTLL-HGLVRDAEGRKMSKSLGNGVDPIEVIDKYGADSLRYMLSTGTSPGQDLKFSF 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + ++   N    N I N    +    L + DGM
Sbjct: 570 EKIEASWN--FINKIWN----ASRFALMNMDGM 596



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 25/174 (14%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           ++K   S  I  PN   + HIGHA+++ + D++AR  R+ G D L+  G D  G     K
Sbjct: 40  KDKQAFSVVIPPPNVTGKLHIGHAWDVTLQDIIARIKRMQGFDTLYLPGMDHAGIATQAK 99

Query: 58  IAKAAQNAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKR 101
           + +  +  G++      + F+DQ             + +  +   LD S + F  T ++ 
Sbjct: 100 VEEKLREEGISRYDLGREKFIDQVWDWKEEYAGEIRKQWGKLGLSLDYSRERF--TLDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             D  + ++  + +K  IY+G Y   W  +   A  + + ++K  +G +Y+ ++
Sbjct: 158 LSDAVKKVFVTLYEKELIYRGEYIINWDPVAKTALSDIEVIHKDVEGAFYHLKY 211


>gi|149005678|ref|ZP_01829417.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762618|gb|EDK69578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332077000|gb|EGI87462.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 883

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNGGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|189345949|ref|YP_001942478.1| valyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189340096|gb|ACD89499.1| valyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 904

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 113/276 (40%), Gaps = 45/276 (16%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL------ 284
           W+  LT    T  + DN D     F+P D  V G DI+ F    W A ++ A L      
Sbjct: 466 WLWPLTTLGWTGPHSDNDD--LRAFYPTDTLVTGPDIIFF----WVARMIMAGLYFKGDV 519

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P     F+      KG K+SKSLGN  DP++VI+  G DALR+ ++     G+D  + ++
Sbjct: 520 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEE 579

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----------ILKDYDGMIPTPGAFTESDESILSV 393
             K  +  + A  + N  SR V M               Y G  P    F  ++E +L+ 
Sbjct: 580 --KCELGRNFATKLWN-ASRLVFMQREKWFDSLEEFESAYSGFSPDRMTFAFAEEHVLTA 636

Query: 394 CSRVLQEIRENMQNQLIHRALAQ--VISLVSEV---------DRYFDAQKPWELKKTNPD 442
                   R +      H A  Q  V  +V  V         D Y +A K +    ++ D
Sbjct: 637 --------RYHSMLDRYHTAFGQFRVNDIVRNVYEFFWGDFCDWYLEALKIYLSGISDAD 688

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            A   + ++V V+      L   +P + ++I+  + 
Sbjct: 689 AARKAVLLSVYVLDGTLKALHPVMPFITDEIWHFIL 724


>gi|327475194|gb|AEA77192.1| leucyl-tRNA synthetase [Exiguobacterium sp. EPVM]
          Length = 801

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++E  Y+     YP+ A  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 31  DKECFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGFNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F ++N   FR     L  SY  D  I TT+ +++   + ++ ++ D+G  
Sbjct: 91  ALDTGNDPREFTERNIGTFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLHDRGLA 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W  +      N++ +    DG      H PV  +  + +  R++ Y ++LL 
Sbjct: 151 YVDEVAVNWCPVLGTVLANEEVI----DGLSERGNH-PVYRVPMKQWVLRITEYAERLLD 205

Query: 179 YYES--HPEFILPIER 192
             E    PE +  ++R
Sbjct: 206 DLEGLDWPESVKEMQR 221



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL   
Sbjct: 516 DPEKLKRWLPVDLYIGGTEHAVLHLLYARFWHKVLYDIGIVPTKEPFQKLYNQGMILGEN 575

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P ++I+  G D LR +
Sbjct: 576 NEKMSKSKGNVVNPDDIIKSHGADTLRLY 604


>gi|229193026|ref|ZP_04319982.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590473|gb|EEK48336.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|206602933|gb|EDZ39413.1| Leucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 828

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 18/182 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y      YP+ + H+GH     I D LAR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KKTFYCLEMFPYPSGRIHMGHVRNYSIGDALARYKRMRGFNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   V+ DQN  + ++    L +SYD    + T    ++   +  + K  +KG  YK
Sbjct: 92  QRGIHPAVWTDQNIAHMKEQLSRLGLSYDWSREVTTCLPEYYRWNQWFFLKFYEKGLAYK 151

Query: 122 G------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                  C S    L +E            +G  +  + +PV     E ++ R++ Y  +
Sbjct: 152 KEGLLNWCDSCLTVLANEQV---------EEGLCWRCK-SPVTLRPMEQWYLRITDYARE 201

Query: 176 LL 177
           LL
Sbjct: 202 LL 203



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 34/235 (14%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEK 302
           + A+ W P D ++ G +    H +Y   F      L   + P P + + + G +L  G K
Sbjct: 522 TAARQWIPVDQYIGGVEHAILHLLYSRFFTRALKDLGIVDSPEPFRSLLTQGMVLKDGAK 581

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP ++IE  G D +R F +      KD  +D   ++          +G L 
Sbjct: 582 MSKSKGNVVDPDQLIERYGADTVRLFTLFSAPPDKDLAWDDKAVEGAYRF-----LGRLY 636

Query: 363 SRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
            R +   L  +  + P+ G       + + + +L+     ++++  +++ N  ++ A+A+
Sbjct: 637 QRVLE--LSRFPAIPPSSGGAARGPVSSAQKPLLAKIHETIRDVTFDLESNNQMNTAIAR 694

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           ++ L++             L   +P++    L +  E    L +LL  F P L+ 
Sbjct: 695 LMELLN------------ALGNGDPEKTEE-LPLLREGYTTLLLLLSPFAPHLSQ 736


>gi|148977649|ref|ZP_01814225.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963164|gb|EDK28432.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 201

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  
Sbjct: 7   QLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S
Sbjct: 67  GITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 126

Query: 126 GWYSLRDEAYYND 138
             +    E +  D
Sbjct: 127 QLFDPEKEMFLPD 139


>gi|301056248|ref|YP_003794459.1| leucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378417|gb|ADK07321.1| leucyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|293364162|ref|ZP_06610889.1| valine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702483|ref|ZP_07639438.1| valyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317340|gb|EFE57766.1| valine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623977|gb|EFO02959.1| valyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 883

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D
Sbjct: 503 PF-KNALIHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQD 556



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|228955020|ref|ZP_04117036.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804646|gb|EEM51249.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|206969627|ref|ZP_03230581.1| leucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229072245|ref|ZP_04205451.1| Leucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081997|ref|ZP_04214486.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229181058|ref|ZP_04308391.1| Leucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206735315|gb|EDZ52483.1| leucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602386|gb|EEK59874.1| Leucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228701296|gb|EEL53793.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710853|gb|EEL62822.1| Leucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|56477924|ref|YP_159513.1| leucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821074|sp|Q5P252|SYL_AZOSE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56313967|emb|CAI08612.1| leucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 873

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 16/181 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVLAR+HR+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARYHRMRGFNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V     T   +D      + +   LD S +  + T +  ++   + L+ ++  KG I
Sbjct: 92  QNNVPPAKWTYANIDYMKTQLKRLGFALDWSRE--LATCKPDYYRWEQWLFTRLYQKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK   +  +   DE    +++V  G     G     +  P+       Y+ +++AY D+L
Sbjct: 150 YKKLGTVNWDPVDETVLANEQVIDGRGWRSGALIEKREIPM-------YYMKITAYADEL 202

Query: 177 L 177
           L
Sbjct: 203 L 203


>gi|51892369|ref|YP_075060.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826163|sp|Q67Q27|SYI_SYMTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51856058|dbj|BAD40216.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 938

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 11/108 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I+ VW D+ ++++   G L+  P+ +    WPADL++ G D  R  F +    A +    
Sbjct: 529 ILDVWFDSGSSHV---GVLETRPELT----WPADLYLEGSDQHRGWFKSSLLTAVVARDG 581

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K V +HGF +  +G K+SKSLGNV+DP +VI+  G D LR ++ 
Sbjct: 582 KPPYKAVLTHGFTVDEQGRKMSKSLGNVVDPADVIKRYGADILRLWVA 629


>gi|324503035|gb|ADY41324.1| Valyl-tRNA synthetase [Ascaris suum]
          Length = 992

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 152/420 (36%), Gaps = 83/420 (19%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LR+   Y  +    G      +   + V+ M +E +F R     D +L    +    I P
Sbjct: 382 LREIGAYGGESSCSGGQIPMCSRTGDIVEPMMKEQWFLRCDEINDAILDAVNTAKLHITP 441

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL----------TNYL 239
              R ++  ++ S  +   LSR+   WG +IP         WI A           T   
Sbjct: 442 DFLRTKLEEWL-SNKEPWCLSRQLL-WGHRIPAYRIANSNKWIAATSDEDARRIFGTEVK 499

Query: 240 TTTGYLDNPDGSKAKF-----------WPA--------DLHVIGKDILRFHAIYWPA--- 277
            + G + + D     F           WP          L   G DI+ F    W A   
Sbjct: 500 NSAGIMQDEDVLDTWFSSSLVPLVVAGWPEKRLNSSPLSLMETGHDIVGF----WVARML 555

Query: 278 ---FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV--- 330
              + LS  +P    V  HG +    G K+SKSLGNVIDP++VI+ + +D +   L    
Sbjct: 556 TVCYRLSGCIPF-THVLLHGLVRDSAGRKMSKSLGNVIDPVDVIDGISIDDMIGRLKESS 614

Query: 331 -----REIA--------------CGKDGF------YDKDGLKKRVNAD--------LANG 357
                +E+A              CG D        YD   L   VN            N 
Sbjct: 615 LPDSEKEVASSNLRTMYPNGVTRCGPDALRFALLRYDLTALDINVNISETALEGLRFCNK 674

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + NL + + S+  K   G   +  +   +D  I S  S  LQ +   +    +H A A +
Sbjct: 675 LWNLCAYAKSLWSKAQSG-TESRKSIHPADRWIKSCLSNSLQAMNMRIDEGNVHLAFASI 733

Query: 418 --ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               L    D Y +  K   L      R + +  V  EVI +  I L  F+P ++  +F+
Sbjct: 734 HKFILADLCDVYLETTKK-ALWNNEEKRINEIAVVLREVIEKSLIALSVFMPFVSEYLFE 792


>gi|225864163|ref|YP_002749541.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229184419|ref|ZP_04311626.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|225787752|gb|ACO27969.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228599215|gb|EEK56828.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 1033

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  I
Sbjct: 746 TISKLIAPFTPFVAEDI 762



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|298506245|gb|ADI84968.1| leucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 824

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G     +  +N    R     + +SYD    + T +  ++   + ++ ++ +KG +Y 
Sbjct: 92  KHGSHPAKWTYENIDYMRSQLKKMGLSYDWGRELATCDVDYYKWEQKMFLEMYEKGLVYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K  +  W    +    N+    +  DG  +    +  Q  E + +FFR++ Y ++LL   
Sbjct: 152 KSSFVNWCPACETVLANE----QVEDGCCWRCDSDVTQ-KELDQWFFRITRYAEELLEDT 206

Query: 179 -YYESHPEFILPIER 192
                 PE +L ++R
Sbjct: 207 WNLPGWPERVLVMQR 221



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 28/239 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D ++A +W P D ++ G +    H +Y   F         ++   P  K + + G ++  
Sbjct: 520 DRARAGYWMPVDQYIGGIEHAVLHLLYSRFFTKALRDLGYVTVAEPF-KNLLTQGMVIKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP  +IE  G D  R F +      KD  +   G++        N + 
Sbjct: 579 GAKMSKSKGNVVDPDALIERYGADTARLFTLFAAPPEKDLDWSDQGVEGSFR--FLNRVW 636

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            LV   +  I        P P A  +    +     + ++++ +++  +   + A++ V+
Sbjct: 637 RLVFEVLPFI---GSAGKPDPAALGDGARDLRRTVHKTIRKVTDDLDERFHFNTAISAVM 693

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LV+ +  +             P  A     V  E +  +  LL  FVP +A ++++ L
Sbjct: 694 ELVNAIQSF------------EPKNAPENAPVLREAVESVVQLLAPFVPHVAEELWESL 740


>gi|284097610|ref|ZP_06385657.1| valyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830879|gb|EFC34942.1| valyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 546

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 15/143 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSAN 283
           ++  W  +      T G+ +    ++A    F P  + V G DIL F    W A ++ A+
Sbjct: 409 VLDTWFSSWLFPFATLGWPNEDADTQADLKYFHPTHVLVSGYDILFF----WIARMIMAS 464

Query: 284 L----PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L     +P + +F  G I  K G  +SKSLGN IDP+E+IE+ G DA+R++L    A G+
Sbjct: 465 LYFMGEVPYRDIFITGMIKDKLGRWMSKSLGNGIDPLELIEKYGADAVRFYLTILCAQGQ 524

Query: 338 DGFYDKDGLKKRVNADLANGIGN 360
           D   D  G K  +  + AN I N
Sbjct: 525 DIRLDPAGFK--MGRNFANKIWN 545


>gi|228910590|ref|ZP_04074402.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849005|gb|EEM93847.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|86356478|ref|YP_468370.1| isoleucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86280580|gb|ABC89643.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 968

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 571 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 624

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 625 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 670



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPI 108


>gi|30022810|ref|NP_834441.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048442|ref|ZP_04194008.1| Leucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229112203|ref|ZP_04241743.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229130018|ref|ZP_04258982.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147309|ref|ZP_04275659.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|296505206|ref|YP_003666906.1| leucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|33301671|sp|Q816T0|SYL_BACCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29898369|gb|AAP11642.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228636141|gb|EEK92621.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653462|gb|EEL09336.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671187|gb|EEL26491.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228722903|gb|EEL74282.1| Leucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326258|gb|ADH09186.1| leucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|15828564|ref|NP_325924.1| leucyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|29337030|sp|Q98RB6|SYL_MYCPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14089506|emb|CAC13266.1| LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA LIGASE) [Mycoplasma pulmonis]
          Length = 807

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 6/185 (3%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K Y+     YP+    H+GH       D++ARF RL G DVL   G D  G    +
Sbjct: 26  KSDKKYYVLDMFPYPSGSGLHVGHPEGYTATDIIARFKRLKGFDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG- 117
            A + G     F  +N   F+     L +SY  D  + TT+ + ++  + ++K++  KG 
Sbjct: 86  YAISTGNNPNEFTQKNIATFKKQIKSLGLSYDFDKEVNTTDPKFYEQTQWIFKELYKKGL 145

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176
            +       W         N +EV    DG   + + + PV   +   +  +++ Y DKL
Sbjct: 146 AVLADIDVNWCEELGTVLAN-EEVLIDKDGNKVSERGSFPVVKKKMRQWVLKITNYADKL 204

Query: 177 LSYYE 181
           L   E
Sbjct: 205 LEGLE 209



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 44/260 (16%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIY---WPAFLL 280
           Y+ Y+  +A  +Y      LD+ +  K   K+ P DL++ G++    H +Y   W  FL 
Sbjct: 497 YLAYILKNADGSYEK----LDSEEAKKRFKKWLPVDLYIGGQEHAVLHLLYSRFWHRFLY 552

Query: 281 SANLPLPK----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              +   K    KV + G IL   G+K+SKS GN+I+P E+++E+G D LR + +     
Sbjct: 553 DIGVVPTKEPFQKVVNQGMILGTDGQKMSKSRGNIINPSEIVDELGADTLRVYEMFMGPL 612

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             D  +  + +K         GI   + R   +    +DG        +  D  ILS  +
Sbjct: 613 TDDKDWQVESIK---------GIRKWLERVYRLFEMFFDGQKTIEK--SNEDHLILSQYN 661

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++++EI   ++    + A+++++  V+ +  Y   + P                 + E++
Sbjct: 662 KLIKEIENEVELLKFNTAISKLMVFVNLL--YKVEKIP-----------------SWEIL 702

Query: 456 RQLAILLQAFVPKLANKIFD 475
           +  A++L  F P +A ++ +
Sbjct: 703 KNFALILSLFAPHIAEELLE 722


>gi|124385578|ref|YP_001027213.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450845|ref|YP_001082165.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|166230615|sp|A3MPH9|SYL_BURM7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230616|sp|A2S5J4|SYL_BURM9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124293598|gb|ABN02867.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126243715|gb|ABO06808.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10247]
          Length = 864

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQAMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK   +  +   D+    +++V  G     G +   +  P+       Y+ R++ Y D+L
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDGRGWRSGAFVEKREIPM-------YYMRITQYADEL 202

Query: 177 LS 178
           L+
Sbjct: 203 LN 204


>gi|53725689|ref|YP_104000.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67643539|ref|ZP_00442284.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121599159|ref|YP_991720.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|166998532|ref|ZP_02264390.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254179000|ref|ZP_04885654.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202719|ref|ZP_04909082.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208060|ref|ZP_04914410.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|60390676|sp|Q62H20|SYL_BURMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230617|sp|A1V0G7|SYL_BURMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52429112|gb|AAU49705.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227969|gb|ABM50487.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|147746966|gb|EDK54043.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751954|gb|EDK59021.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|160694914|gb|EDP84922.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238524907|gb|EEP88337.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243065217|gb|EES47403.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 864

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQAMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK   +  +   D+    +++V  G     G +   +  P+       Y+ R++ Y D+L
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDGRGWRSGAFVEKREIPM-------YYMRITQYADEL 202

Query: 177 LS 178
           L+
Sbjct: 203 LN 204


>gi|324991274|gb|EGC23207.1| valine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 883

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P    V G DI+ F    + +     +   
Sbjct: 443 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKS 502

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K    HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  +  
Sbjct: 503 PF-KNALIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVRFSY 561

Query: 344 DGLKKRVNADLANGIGNLVSRSVSM 368
           + +    N    N I N +SR + M
Sbjct: 562 EKMDASWN--FINKIWN-ISRYILM 583



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 100 EQGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGISVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|313904295|ref|ZP_07837673.1| leucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470845|gb|EFR66169.1| leucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 805

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 118/268 (44%), Gaps = 51/268 (19%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K ++W P D +  G + +  H +Y   W  FL     ++   P  K+ +    +   
Sbjct: 517 DKKKLEYWMPVDHYNGGMEHVTRHLLYSRFWHQFLYDIGEVTTPEPYAKRTYQGMILGSD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GNVIDPI++++  G DALR +++          ++ + LK         G  
Sbjct: 577 GEKMSKSKGNVIDPIDIVKVYGADALRTYVMFMGDYASAAPWNDESLK---------GCK 627

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVI 418
             + R  ++          T  A  E ++  L S   + ++++ E+++N   + A+A ++
Sbjct: 628 RFLDRVAAL----------TDIATAEKEDPKLESSLHKTIKKVSEDIENMKFNTAIAALM 677

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           SL++E             K  +  +   V+++          LL  F P +  +I+  L 
Sbjct: 678 SLINEF-----------TKAGSITKNDLVVFIK---------LLSPFAPHMTEEIWQQLG 717

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPI 506
           + ++ + F ++ +   P +   KT D +
Sbjct: 718 MNEDGKTFLTVSEW--PSYDEAKTVDSV 743



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       +VL+R  R+ G +VLF  G D  G      A
Sbjct: 30  KKKWYGLVEFPYPSGAGMHVGHIKAYSSIEVLSRKRRMQGYNVLFPIGFDSFGLPAENYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
                      ++N  +F +    +  S+D   +F  T+ K ++   + +++K+ +KG +
Sbjct: 90  IKTNTHPHDITEKNIEHFTEQLKSVGFSFDWDREFA-TSRKDYYKWTQWIFEKLYEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           ++      Y    +   ++++    + G   +  H+ V  + ++ +F R++ Y D+LLS 
Sbjct: 149 FRSKTLVNYCPHCKVVLSNED----SQGGKCDICHSDVVQLSKDVWFLRITDYADRLLSG 204

Query: 180 YES--HPEFI 187
            +S  +PE I
Sbjct: 205 LDSVDYPESI 214


>gi|228987994|ref|ZP_04148099.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771741|gb|EEM20202.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|209548081|ref|YP_002279998.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533837|gb|ACI53772.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 963

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 566 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 619

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 620 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 665



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 27/229 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG     KI 
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKIE 113

Query: 60  KAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDTCR 107
           +  +  G    +V V++  R  R+ A   +    ++F R           T    H   R
Sbjct: 114 EKYREKGRNKDEVPVNEFRRECREFATGWIKTQAEEFKRLGIEGDFDNPYTTMNFHAESR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
           I  +  KI+  G +Y+G     +S+ +     + EV    + Q Y +    V++   EG 
Sbjct: 174 IAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEV----EYQDYESDTIWVKFPVVEG- 228

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
               +A +D  +  + + P + +P  R     + V  GL +++ +   F
Sbjct: 229 ---PAALKDAFVVIWTTTP-WTIPGNRAVSFSARVSYGLYEVTAAENDF 273


>gi|126459216|ref|YP_001055494.1| isoleucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248937|gb|ABO08028.1| Isoleucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 977

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 32/261 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHVIGKDILR--FHAIYWPAF 278
           Y+M VW+D+   ++         DG +      + +P D    G D  R  F+++   + 
Sbjct: 523 YVMDVWLDSGVAWIAAV------DGERNRELWTQLFPYDFVTEGIDQTRGWFYSLLATSV 576

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L +   P  K +   G IL K G+K+SKS GNV+   ++ E+ G D +R +++ + A  +
Sbjct: 577 LYTGKAPY-KTILIQGLILDKHGQKMSKSKGNVVWAKDLFEKYGADPVRLYILSKAAPWE 635

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVS-----RSVSMILKDYDGMIPTPGAFTESDESILS 392
           D  +D D + K V +DL N + N+V       S+    KD   +        E D+ +LS
Sbjct: 636 DLAFDPDEV-KHVISDL-NILWNVVKFADTYMSLDGFSKDKYPLEEWLNKALEEDKWLLS 693

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFD--AQKPWELKKTNPDR--AST 446
             + +  +++E ++N   H+A       V E    RY     ++ W L+++ PD+  A +
Sbjct: 694 ELNLLTIKVKEYLRNFEFHKAANLWREFVVETLSHRYIRLLRRRVW-LEESTPDKYAAYS 752

Query: 447 VLYVTVEVIRQLAILLQAFVP 467
           VL+    V++ + I+   FVP
Sbjct: 753 VLF---HVLKNVLIIGSVFVP 770



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 30/188 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA----------- 65
           N  PH+GH       DV+ RFHRL G DV    G D  G  +    +             
Sbjct: 53  NGMPHVGHIRGRTYKDVVLRFHRLLGYDVWVQGGWDMQGMPVEWEVEKRLKLRSKKDIEK 112

Query: 66  ------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW---KKISDK 116
                  +     VD+    +++        + D     E R  +     W   KK  + 
Sbjct: 113 YGLEKFALACNALVDEYLEQWKEWGTRRLGLWLDLDNAYETRKPNYLEYAWRIVKKAHEM 172

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G + +     W+  R E   +D EV  G     Y  + +P  +++     FR+   +++ 
Sbjct: 173 GLLTEDYRVLWFCPRCETSLSDHEVALG-----YEEREDPSIYVK-----FRVEGSENEY 222

Query: 177 LSYYESHP 184
           L  + + P
Sbjct: 223 LVIWTTTP 230


>gi|329769394|ref|ZP_08260807.1| leucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838964|gb|EGF88555.1| leucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 809

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 9/179 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ A  H+GH       D+L+R+ R +G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  QN   FR     L  SY  D  + TT+ +++   + ++KK+ +KG  Y
Sbjct: 90  LDTGNDPRDFTKQNIDTFRRQIKELGFSYDWDREVNTTDPKYYKWTQWIFKKLYEKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                  W         N++ +    DG+     H PV+      +  +++ Y ++LL+
Sbjct: 150 VDEVPVNWCPALGTVLSNEEVI----DGKSERGGH-PVERRPMRQWVLKITDYAEQLLA 203



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK 299
           D  K K+W P D+++ G +    H +Y   W   L    L +P     +K+F+ G IL +
Sbjct: 514 DPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGL-VPSREPFQKLFNQGMILAE 572

Query: 300 G-----EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           G     EK+SKS GNV++P ++I   G D LR +
Sbjct: 573 GKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVY 606


>gi|317011778|gb|ADU85525.1| leucyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 806

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  + +  +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIENMQKEFEALGFSFAKNREFATSDPNYTEFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  ++   L+
Sbjct: 558 KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALE 617

Query: 348 ------KRVNADLANGIGNLVSR 364
                 KR+  D AN I    S+
Sbjct: 618 GAHRFIKRL-YDKANAITPTTSK 639


>gi|222085012|ref|YP_002543541.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221722460|gb|ACM25616.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 960

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 563 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 616

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 617 PY-DAVLTHGFTMDEKGEKMSKSKGNVTSPQEVMKDAGADILRLWVM 662



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSNYVPGWDCHGLPIEWKIE 113

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRTT----------EKRHHDTCR 107
            K  +      +V V++  +  RD  A  + I  ++F R                H   R
Sbjct: 114 EKYREKGKNKDEVPVNEFRQECRDFAAGWIKIQSEEFKRLGIVGDFDNPYLMMNFHAESR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELLKIAKTGQLYRGSKPVMWSVVERTALAEAEV 209


>gi|170044220|ref|XP_001849753.1| leucyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167867450|gb|EDS30833.1| leucyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 887

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K Y+     YP+   H+GH     I+D +ARF+RL+GL+VL   G D  G     AA
Sbjct: 67  EAPKRYVLAMFPYPSGNLHMGHVRVYTISDAMARFYRLNGLNVLHPMGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    +  QN    R+  ++L  S+D
Sbjct: 127 IQRRIPADRWTKQNIGQMREQLEMLQFSFD 156


>gi|47565165|ref|ZP_00236208.1| leucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557951|gb|EAL16276.1| leucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|225677273|ref|ZP_03788256.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590693|gb|EEH11937.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 838

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+ R +G +VL   G D  G     AA
Sbjct: 25  KQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           ++  ++ + +  +N  N R     + +SY+
Sbjct: 85  RDNNISPETWTKENIDNMRTQLKSIGLSYN 114



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 25/149 (16%)

Query: 288 KKVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           K++ + G  +  G  EK+SKS  N +DP  +IE+ G D  R F++ +    KD  +  +G
Sbjct: 595 KELIAQGAKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDNG 654

Query: 346 LKKRVNADLANGIGNLVSRSVSMILK------DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           ++         G    V++   M+++       YD    T G   E  + I     ++L 
Sbjct: 655 VE---------GCSRYVNKLWRMVMQLRPVNIHYDNENVT-GGLLEYRKKI----HKLLH 700

Query: 400 EIRENMQNQLIHRALA---QVISLVSEVD 425
            + ++++N  ++  +A   ++ +L++E+D
Sbjct: 701 GLTDDLENCRLNCVVAKFREMTNLIAEID 729


>gi|228961008|ref|ZP_04122636.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798641|gb|EEM45626.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|42519974|ref|NP_965889.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|60390721|sp|Q73IT7|SYL_WOLPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|42409711|gb|AAS13823.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 838

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+ R +G +VL   G D  G     AA
Sbjct: 25  KQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           ++  ++ + +  +N  N R     + +SY+
Sbjct: 85  RDNNISPETWTKENIDNMRTQLKSIGLSYN 114



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 25/149 (16%)

Query: 288 KKVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           K++ + G  +  G  EK+SKS  N +DP  +IE+ G D  R F++ +    KD  +  DG
Sbjct: 595 KELIARGAKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDG 654

Query: 346 LKKRVNADLANGIGNLVSRSVSMILK------DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           ++         G    V++   M+++       YD    T G   E  + I     ++L 
Sbjct: 655 VE---------GCSRYVNKLWRMVMQLRPVNIHYDNENVT-GGLLEYRKKI----HKLLH 700

Query: 400 EIRENMQNQLIHRALA---QVISLVSEVD 425
            + ++++N  ++  +A   ++ +L++E+D
Sbjct: 701 GLTDDLENCRLNCVVAKFREMTNLIAEID 729


>gi|42783928|ref|NP_981175.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206977281|ref|ZP_03238178.1| leucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962228|ref|YP_002340798.1| leucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098211|ref|YP_002532268.1| leucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141476|ref|ZP_04270012.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229198904|ref|ZP_04325595.1| Leucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|60390720|sp|Q72YY8|SYL_BACC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695249|sp|B7HSS7|SYL_BACC7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782484|sp|B9J1E1|SYL_BACCQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|42739858|gb|AAS43783.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206744432|gb|EDZ55842.1| leucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064989|gb|ACJ79239.1| leucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242269|gb|ACM14979.1| leucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228584607|gb|EEK42734.1| Leucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228641961|gb|EEK98256.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|315124572|ref|YP_004066576.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018294|gb|ADT66387.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 380

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY ++LL
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAYAEELL 201


>gi|218231488|ref|YP_002369537.1| leucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229152938|ref|ZP_04281120.1| Leucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|226695100|sp|B7H798|SYL_BACC4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218159445|gb|ACK59437.1| leucine--tRNA ligase [Bacillus cereus B4264]
 gi|228630551|gb|EEK87198.1| Leucyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|262370952|ref|ZP_06064275.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262314028|gb|EEY95072.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 947

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 31/175 (17%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K + +HGF++  KG K+SKSLGN+I P
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSIAINERAPY-KGLLTHGFVVDEKGRKMSKSLGNIITP 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVS 367
            ++I+++G D LR+++       E+  GK+ F    DG ++             +  ++ 
Sbjct: 626 QDIIKDMGADGLRFWIASADYRYEMTAGKEIFNRASDGYRR-------------IRNTLR 672

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCS---RVLQEIRENMQNQLIHRAL 414
            +L + +G  P+  A         D+ IL   +   + +Q+  E+M   ++  AL
Sbjct: 673 FLLANLNGFKPSTDALPVDQLIALDQYILQRAADVQKTIQQAYEDMNFHIVANAL 727



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N Q H+GHA   ++ D++ +   LDG D  +  G D HG  I  K  
Sbjct: 57  KKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRILDGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV V  ++  FR          +++   DF+R
Sbjct: 117 EKVG---KVGVKVDASTFRKACREYAYTQVELQKKDFVR 152


>gi|257457671|ref|ZP_05622838.1| isoleucine-tRNA ligase [Treponema vincentii ATCC 35580]
 gi|257445057|gb|EEV20133.1| isoleucine-tRNA ligase [Treponema vincentii ATCC 35580]
          Length = 1101

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 25/244 (10%)

Query: 261 HVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV 316
           H I + + +    ++   +L+A L   P  K    +G +L   G+K+SKSL N  DP EV
Sbjct: 583 HFISEGLDQTRGWFYTLTVLAAALFDRPAFKNCIVNGLVLASDGKKMSKSLRNYTDPNEV 642

Query: 317 IEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           + + G DALR FL+   +   +D  Y  +G++  +   L   I    S S  +   + DG
Sbjct: 643 VGQFGADALRLFLMHSNVVKAEDLKYSDEGVRDVLKGIL---IPLWNSYSFYVTYANIDG 699

Query: 376 MIPTP-----------GAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + P             GAF +      D  ILSV  +++ ++   + +  + +A+  +++
Sbjct: 700 VTPPAHAKLDGADAHIGAFVKELNNPLDRWILSVTEKLVLDVTAALDDYDLSKAIDPIVA 759

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILF 478
            + +++ ++  +      K+  D      Y T+   +++ A++    VP +   I+  L 
Sbjct: 760 YIEQLNNWYIRRSRRRFWKSENDGDKVQAYETLYRALKKFALVAAPVVPFITESIWQNLR 819

Query: 479 VADE 482
            AD+
Sbjct: 820 TADD 823


>gi|49481694|ref|YP_038784.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|60390705|sp|Q6HCE2|SYL_BACHK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49333250|gb|AAT63896.1| leucine--tRNA ligase (leucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 802

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|257791673|ref|YP_003182279.1| valyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317487862|ref|ZP_07946454.1| valyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325830576|ref|ZP_08163997.1| valine--tRNA ligase [Eggerthella sp. HGA1]
 gi|257475570|gb|ACV55890.1| valyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316912988|gb|EFV34505.1| valyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325487322|gb|EGC89764.1| valine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 893

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 54/363 (14%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  ++  E E +F  +   +       E       P ER  +V       LKD  +SR+ 
Sbjct: 362 HTKLEPWESEQWFVAVDGLKQDAARVVEDGSIQFHP-ERWKQVYLDWLDNLKDWCISRQL 420

Query: 214 FDWGIKIP----DDPQY-----------------------IMYVWIDALTNYLTTTGY-- 244
           + WG +IP    D+  +                       ++  W  +      T G+  
Sbjct: 421 W-WGHRIPMFYCDECGWEDASVEDVETCPVCGKPVRQDEDVLDTWFSSQLWPFATMGWTE 479

Query: 245 --LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK--- 299
             +D P   +A  +P  +    +DI+      W A ++ A++    ++     I+H    
Sbjct: 480 EGMDAPQMKQA--YPTQVLSTARDIMGL----WVARMVMASMYCTDRIPFEHVIIHPTVM 533

Query: 300 ---GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+ +SKS GN +DP+ ++E+ G D +R+ L+ ++   +D  +++  L+   N   AN
Sbjct: 534 AADGKPMSKSRGNGVDPLRLMEDYGADGMRFGLLMQVTGAQDLKFNEAKLESSRN--FAN 591

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N  +R V+M L DY    P P   T +D  I S  + ++  + E   N        +
Sbjct: 592 KIRN-AARFVTMNLDDYVPGAPEP--VTPADRWIFSRLAGLVARVDEAYGNFEFGEITRE 648

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + S       D Y +  K   L  +  DRA+    + V V+ Q   LL   +P +  +I+
Sbjct: 649 LFSFFWNEFCDWYIEFSKA-RLNGSPEDRAACQRNL-VFVLDQALRLLHPIMPFVTEEIY 706

Query: 475 DIL 477
             L
Sbjct: 707 QQL 709


>gi|228941918|ref|ZP_04104462.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974849|ref|ZP_04135411.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981442|ref|ZP_04141740.1| Leucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778267|gb|EEM26536.1| Leucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784853|gb|EEM32870.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817751|gb|EEM63832.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942523|gb|AEA18419.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 802

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|254460898|ref|ZP_05074314.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677487|gb|EDZ41974.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 1021

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 14/119 (11%)

Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
           G K+P   DP  ++  W  +    + T G+ +  D   +K++P    + G+DIL F    
Sbjct: 579 GHKMPLWRDPD-VLDTWFSSGLWPIGTLGWPEQTD-ELSKYFPTSTLITGQDILFF---- 632

Query: 275 WPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           W A ++   L +  +V     + HG +   KG+K+SKS GNV+DP+E+I+E G DALR+
Sbjct: 633 WVARMMMMQLAVVDEVPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEFGADALRF 691



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          HIGHA+   + D++ R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 53 HIGHAFNNTLQDIMIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVER 96


>gi|241203267|ref|YP_002974363.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857157|gb|ACS54824.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 963

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 566 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 619

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 620 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 665



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKIE 113

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRT----------TEKRHHDTCR 107
            K  +      +V V++  R  R+  A  + +  ++F R           T    H   R
Sbjct: 114 EKYREKGKNKDEVPVNEFRRECREFAAGWIKVQAEEFKRLGIEGDFDNPYTTMNFHAESR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEV 209


>gi|189500957|ref|YP_001960427.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496398|gb|ACE04946.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 918

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 85/203 (41%), Gaps = 23/203 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +    LTT G+    + +K    F+P D  V G DI+ F    W A ++ A L
Sbjct: 472 VLDTWFSSWLWPLTTLGWTGKDEDNKDIQAFYPTDTLVTGPDIIFF----WVARMIMAGL 527

Query: 285 ------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P     F+      KG K+SKSLGN  DP++VI+  G DALR+ +V     G+D
Sbjct: 528 YFKGDVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDAYGTDALRFTIVYIAPLGQD 587

Query: 339 GFYDKDGLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             + ++  K     + A  I N   LV      +    D        FT    S+    S
Sbjct: 588 VLFGEE--KCEFGRNFATKIWNAARLVFMQREKVFGSSDAFSDLYQGFTPESASL----S 641

Query: 396 RVLQEIRENMQNQL--IHRALAQ 416
              Q I    Q  L   H+A AQ
Sbjct: 642 DAQQWITGRYQEMLGSYHKAFAQ 664


>gi|229158352|ref|ZP_04286417.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625099|gb|EEK81861.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 802

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|297619453|ref|YP_003707558.1| valyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378430|gb|ADI36585.1| valyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 907

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 40/322 (12%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LPI+   E     K G K+L       D               W+D+    L   G+L++
Sbjct: 445 LPIDPTKESPYTCKCGSKNLRAETDVLD--------------TWMDSSITPLVIAGWLED 490

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +  K K +P  L   G DI+R  A Y    +  L+   P  +   +       G K+SK
Sbjct: 491 EEFFK-KHYPVQLRPQGHDIIRTWAFYTIIRSLALTNQKPWDEIAVNGMVFGEDGFKMSK 549

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-------GFYDKDGLKKRVNAD--LAN 356
           S GNV+ P E+  + G D+LR +    I  GKD         Y    L+K  NA      
Sbjct: 550 SRGNVVAPSEITTKYGADSLRLWASNSI-LGKDVPFAWKEVEYGNRFLRKVWNASKFAKM 608

Query: 357 GIG-NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            IG ++++   S I K+ +  I  P      D  ILS  +R+++E+ E+++    +  +A
Sbjct: 609 NIGDDVIAEIKSKIAKNENIEIKNP-----VDLWILSKLNRLVKEVSEDLEGYKFN-CVA 662

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKL 469
            +   +     D Y +  K     K   + A+       Y   +VI +   +L  F P  
Sbjct: 663 DIQKFLWHEFCDNYIELVKHRLYNKEETEEAACEKFMAQYTLYKVITECTKMLAPFTPHF 722

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           A+ + +I  + D +  + +LD+
Sbjct: 723 ADMVGEIYEIDDLHFIWATLDE 744



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 29/148 (19%)

Query: 3   EREKLY------------ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTG 50
           E EKLY            I T   YP  + H+GHA      D++ARF R+ G DV+F  G
Sbjct: 20  ESEKLYKFMEDEKRPPYIIDTPPPYPTGKMHLGHALNWTYMDIIARFKRMTGYDVMFPQG 79

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVD-------------QNSRNFRDMADVLDISYD---DF 94
            D HG       +     TK  VD             +N    R+    L IS D   ++
Sbjct: 80  WDCHGLPTEVKVEETHNITKSCVDRQEFRKMCVELTEENVEKMREQVRSLGISTDWDREY 139

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKG 122
           I  T   +    +  + ++ +KG IY+G
Sbjct: 140 ITMT-PEYVKKSQTAFLRMQEKGLIYRG 166


>gi|83648017|ref|YP_436452.1| leucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726292|sp|Q2SBE7|SYL_HAHCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83636060|gb|ABC32027.1| leucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 861

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    ++   +L   YD    + T    ++   +  + ++ +KG +YK
Sbjct: 92  KNNVAPAKWTYENIAYMKNQLKLLGFGYDWNRELATCRPEYYKWEQWFFTRLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   DE    +++V  G     G     +  P QW      F +++ Y ++LL+
Sbjct: 152 KMSTVNWDPVDETVLANEQVIDGKGWRSGAVVERREIP-QW------FIKITDYAEQLLN 204

Query: 179 ---YYESHPEFILPIER 192
                E+ PE +  ++R
Sbjct: 205 DLDKLENWPEQVKTMQR 221



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 43/261 (16%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y ++P   K  F P D+ V     L        AFL+    P+         I+ 
Sbjct: 570 IAETFYREDPSSKKTYFNPRDVRVE----LDTQGNSPKAFLIEDGQPV---------IIG 616

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS  N +DP E+I++ G D +R F +      +   + + G++         G 
Sbjct: 617 PKEKMSKSKNNGVDPQELIDKYGADTVRLFTMFAAPPEQSLEWSESGVE---------GQ 667

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR-----A 413
              + R   ++    +     P    E +E+  ++  +  + I++ M ++  HR      
Sbjct: 668 HRFLRRLWKLVHTHVEKKGAAPLNVAELNETQRTLRRKTHETIKK-MTDEFNHRMAINTG 726

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A V+ L++E+ R+              D +   L V  E +    ++L   VP +++ +
Sbjct: 727 IAMVMELLNELSRF-------------EDDSPQGLAVVQEALETAVLVLAPIVPHISHGL 773

Query: 474 FDILFVAD--ENRCFQSLDQR 492
           +  L   D   N  +  LD++
Sbjct: 774 WRELGHEDVVMNAPWPQLDEK 794


>gi|210623773|ref|ZP_03294033.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
 gi|210153355|gb|EEA84361.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
          Length = 807

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   Y      YP+ + H+GH     I DV+ARF ++ G +VL   G D  G     AA
Sbjct: 31  EKPNYYTLEMFPYPSGKLHMGHVRNYSIGDVIARFKKMKGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    R+  ++L +SY  D  + T+   ++   + ++ K+ ++G  Y
Sbjct: 91  IKHGIHPHKWTMENIAEMREQLNLLGLSYDWDREVATSTPEYYKFTQEIFLKLLERGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K  Y  W    +    N+  V     G+        ++  + E ++F+ +A+ ++LL+
Sbjct: 151 KKKSYVNWCPSCETVLANEQVV----QGECERCGTTVIK-KDLEQWYFKTTAFAEELLN 204



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 29/233 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIY--W--PAF----LLSANLPLPKKVFSHGFILHKGEKISK 305
           K+ P D ++ G +    H +Y  W   AF    ++ A+ P  K + + G +L +G K+SK
Sbjct: 511 KWVPVDQYIGGVEHAIMHLLYARWLMKAFHSMGMVEADEPF-KNLLTQGMVLKEGSKMSK 569

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN + P+++I+E G D  R F++      +D  +   G++            N V R 
Sbjct: 570 SKGNTVSPLKIIDEYGADTARLFILFAAPPERDLDWSDQGVEGCFK------FLNRVYRL 623

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V  + ++        G  T +D+ +    + V++++  ++  +   + ++A ++ L++E+
Sbjct: 624 VDELAEEVKNCDDEFGKLTSADKDMRFTINSVIKKVTSDLDEKFGFNTSIASLMELINEM 683

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +Y          K    R S V+   VE I     ++  F P L  +++ ++
Sbjct: 684 YKY----------KELDGRNSAVIKEGVEAI---VTIIAPFTPHLGEELWQMI 723


>gi|30264808|ref|NP_847185.1| leucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530293|ref|YP_021642.1| leucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187628|ref|YP_030881.1| leucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140764|ref|YP_086065.1| leucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65322109|ref|ZP_00395068.1| COG0495: Leucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118479871|ref|YP_897022.1| leucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165869770|ref|ZP_02214428.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167633827|ref|ZP_02392150.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638006|ref|ZP_02396284.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686005|ref|ZP_02877228.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170705342|ref|ZP_02895806.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177651275|ref|ZP_02934106.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568330|ref|ZP_03021238.1| leucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196033128|ref|ZP_03100541.1| leucyl-tRNA synthetase [Bacillus cereus W]
 gi|196044043|ref|ZP_03111280.1| leucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905973|ref|YP_002453807.1| leucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866730|ref|YP_002752108.1| leucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817533|ref|YP_002817542.1| leucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917393|ref|ZP_04080944.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929795|ref|ZP_04092811.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936052|ref|ZP_04098861.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948491|ref|ZP_04110772.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124310|ref|ZP_04253500.1| Leucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186998|ref|ZP_04314149.1| Leucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229600203|ref|YP_002869016.1| leucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687549|ref|ZP_05151405.1| leucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725114|ref|ZP_05186897.1| leucyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736852|ref|ZP_05194558.1| leucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741887|ref|ZP_05199574.1| leucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754515|ref|ZP_05206550.1| leucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757348|ref|ZP_05209375.1| leucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|33301675|sp|Q81KK6|SYL_BACAN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|60390677|sp|Q632V2|SYL_BACCZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230609|sp|A0RJX2|SYL_BACAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226731224|sp|B7JT07|SYL_BACC0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782481|sp|C3PBK0|SYL_BACAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782482|sp|C3LAX2|SYL_BACAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782483|sp|C1EW09|SYL_BACC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30259483|gb|AAP28671.1| leucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505441|gb|AAT34117.1| leucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181555|gb|AAT56931.1| leucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974233|gb|AAU15783.1| leucine--tRNA ligase (leucyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419096|gb|ABK87515.1| leucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164714599|gb|EDR20118.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513823|gb|EDR89191.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167530628|gb|EDR93330.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170129467|gb|EDS98330.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670469|gb|EDT21209.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083101|gb|EDT68163.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560586|gb|EDV14563.1| leucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994557|gb|EDX58512.1| leucyl-tRNA synthetase [Bacillus cereus W]
 gi|196025379|gb|EDX64049.1| leucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218537193|gb|ACK89591.1| leucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787736|gb|ACO27953.1| leucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227003674|gb|ACP13417.1| leucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596450|gb|EEK54119.1| Leucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659133|gb|EEL14783.1| Leucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811171|gb|EEM57511.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823599|gb|EEM69422.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829852|gb|EEM75473.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842235|gb|EEM87332.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229264611|gb|ACQ46248.1| leucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 802

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|229093847|ref|ZP_04224941.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689526|gb|EEL43337.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 802

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|190890541|ref|YP_001977083.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|190695820|gb|ACE89905.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 968

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 571 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 624

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 625 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 670



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPI 108


>gi|196040876|ref|ZP_03108174.1| leucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196028330|gb|EDX66939.1| leucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 802

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|291279189|ref|YP_003496024.1| leucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753891|dbj|BAI80268.1| leucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 853

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y      YP+ + H+GH     I DV+AR+  +   +VL   G D  G     AA 
Sbjct: 30  KKKYYCLEMFPYPSGKIHMGHVRNYAIGDVIARYKLMQDYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +    +L +SY  D  I T +  ++   + ++ ++ +KG  YK
Sbjct: 90  KNKVHPAKWTYSNIEYMKKQLKMLGLSYDWDREIATCDPEYYKWEQKIFIEMFNKGLAYK 149

Query: 122 GC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY- 179
                 W    +    N+    +  DG+ +    N V+  E EG+FF+++ Y ++LL Y 
Sbjct: 150 KTSLVNWCPDCNTVLANE----QVEDGKCWRCS-NEVEIKEIEGWFFKITDYAEELLEYT 204

Query: 180 --YESHPEFILPIER 192
                 PE +L ++R
Sbjct: 205 YKLSGWPERVLTMQR 219


>gi|289209292|ref|YP_003461358.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288944923|gb|ADC72622.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 863

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 14/179 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+ + H+GH     I DV+ARF R+ G  VL   G D  G     AA  
Sbjct: 33  EPFYCLSMFPYPSGKLHMGHVRNYTIGDVIARFQRMQGRSVLQPMGWDAFGLPAENAAMQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             V    +  QN    R     L  +YD   +F  T +  ++   + L+ ++  KG +Y+
Sbjct: 93  NHVPPAAWTRQNIEQMRTQLKRLGFAYDWSREFA-TCDADYYRWEQWLFVRLLKKGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +  +   D+    +++V +G     G     +  P QW      F R++ Y D+LL
Sbjct: 152 KKATVNWDPVDQTVLANEQVIEGRGWRSGALVERREMP-QW------FLRITDYADELL 203


>gi|167844652|ref|ZP_02470160.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 945

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|30249126|ref|NP_841196.1| leucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|48428538|sp|Q820M7|SYL_NITEU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30138743|emb|CAD85050.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 869

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 6/186 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +R K Y  +   YP+ + H+GH     I DVL+R+ R+ G +V+   G D  G     
Sbjct: 29  IPDRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYRRMQGYNVMQPMGWDAFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   GV    +   N    R     L   I +   + T + +++   + L+ ++ +KG 
Sbjct: 89  AAIQKGVPPAKWTYDNIAYMRSQLQSLGFAIDWQRELATCDPQYYRWNQWLFLRMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V  G   +        V+  E  GY+  ++ Y D+LL+
Sbjct: 149 AYQKTQVVNWDPVDQTVLANEQVIDGCGWRTGAV----VEKREIPGYYLAITRYADELLA 204

Query: 179 YYESHP 184
             E  P
Sbjct: 205 DLEKLP 210


>gi|167909886|ref|ZP_02496977.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196170|ref|ZP_04902594.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169652913|gb|EDS85606.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 945

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|299133850|ref|ZP_07027044.1| valyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591686|gb|EFI51887.1| valyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 956

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 47/273 (17%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D+    + +++P  + V G DI+     +W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDDEKDVR-RYYPTSVLVTGFDII----FFWVARMMMMGLHF 549

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P P  V+ H  +   KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D 
Sbjct: 550 MNDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDI 608

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTESDES----IL 391
                 ++   N   A  + N  SR   M    + K +D         T+  E+    I 
Sbjct: 609 KLSTQRVEGYRN--FATKLWN-ASRFAEMNGCELAKGFDA--------TQCKETLNRWIA 657

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDR------ 443
              SR   E+ E ++    + A   +   V  V  D Y +  KP     T PD       
Sbjct: 658 HETSRATHEVTEAIRAYRFNDAAGAIYRFVWNVYCDWYLELAKP---ALTGPDSEAKRET 714

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + V +   E+++    LL  F+P +  +++ +
Sbjct: 715 QAAVAWARDEILK----LLHPFMPYITEELWAV 743



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + D+L RF R+ G DVL+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGIATQMVVERQ 96


>gi|227893344|ref|ZP_04011149.1| isoleucyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227864759|gb|EEJ72180.1| isoleucyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 929

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG +   +PADL++ G D  R  F++    +  ++   
Sbjct: 525 ILDVWFDSGSSW---SGVMEKRDGLQ---YPADLYLEGSDQYRGWFNSSLITSVAVTGKA 578

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+ +G + +R ++ +
Sbjct: 579 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQ 625



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 25/58 (43%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  + G    +  G D HG  + +     GV  K  
Sbjct: 60  FANGNIHMGHALNKISKDIIVRYKNMSGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 117


>gi|317121723|ref|YP_004101726.1| isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591703|gb|ADU50999.1| Isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 946

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++          +      WPADL++ G D  R  F +    A       
Sbjct: 525 IMDVWFDSGSSHAAVL------ETRPELAWPADLYLEGSDQHRGWFQSSLLTAVATRGQA 578

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G K+SKSLGNV+DP +VI   G D LR + V
Sbjct: 579 PY-RAVLTHGFVVDGEGRKMSKSLGNVVDPNDVIRRYGADVLRLWAV 624



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-QNAGVTTKVFV 73
           Y N   H+G A   ++ DV+ R+  + G D  +  G D HG  I + A +  GV  +   
Sbjct: 58  YANGDIHVGTALNKVLKDVVVRYASMAGYDAPYVPGWDTHGLPIERRALEVLGVDRRAIS 117

Query: 74  DQNSRNF-RDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDI 119
               RN  R  A D ++     F R            T E  +      ++ +++ +G I
Sbjct: 118 PVELRNHCRAYALDQMNRQRQQFRRLGVLGDWERPYLTLEPEYEAKQVEVFGEMARRGYI 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           Y+  YS ++   DE    + E+
Sbjct: 178 YRSLYSVYWCPVDETALAEAEI 199


>gi|145630005|ref|ZP_01785787.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144984286|gb|EDJ91709.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 703

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|125973305|ref|YP_001037215.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003786|ref|ZP_05428774.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417508|ref|ZP_06248528.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|125713530|gb|ABN52022.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992347|gb|EEU02441.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408910|gb|EFB39168.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940462|gb|ADU74496.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 931

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  +G     WPAD+++ G D  R  F +    A       
Sbjct: 531 IMDVWFDSGSSHAAV---LETTEGLT---WPADMYLEGSDQHRGWFQSSLLTAVATKGQA 584

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HG+++  +G K+SKSLGN IDP +VI+E G D LR ++ 
Sbjct: 585 PY-KTVLTHGYVVDGEGRKMSKSLGNGIDPEDVIKEYGADILRLWVA 630


>gi|329890601|ref|ZP_08268944.1| isoleucyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845902|gb|EGF95466.1| isoleucyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 973

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 109/279 (39%), Gaps = 34/279 (12%)

Query: 227 IMYVWIDALTNYLTT-------TGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
           I+ VW D+ + +  T       +GY     G +   WPADL++ G D  R  F +     
Sbjct: 576 ILDVWFDSGSTHAFTLDPRTAASGYT----GDRPSHWPADLYLEGSDQHRGWFQSSLLEG 631

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                  P    V +HGF L   GEK+SKS GN  DP+ +I+E G D LR + V  +   
Sbjct: 632 CGTRGRAPF-NAVLTHGFTLDENGEKMSKSRGNTTDPLTIIKESGADILRLW-VALVDYS 689

Query: 337 KDGFYDKDGLKKRVNA--DLANGI----GNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            D    K  L+  V+A   L N +    G L     +  L DYD   P        ++ I
Sbjct: 690 DDQRIGKQILQTTVDAYRKLRNTVRYLLGALNGFDEAERLTDYDQFPPL-------EKFI 742

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RAST 446
           L     +  ++R+          +  V+   S      YFD +K   L    PD  +   
Sbjct: 743 LHRLWELDGQVRQAYAEYRFQDVVRPVLEFCSGDLSALYFDVRKD-SLYCDRPDSIKRRA 801

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           V  V  EV  +L   L    P   ++ +   F      C
Sbjct: 802 VRTVMDEVFSRLTAWLAPLTPFTMDEAWTTRFPDAGTNC 840


>gi|260581747|ref|ZP_05849544.1| leucyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095340|gb|EEW79231.1| leucyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 861

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|209558724|ref|YP_002285196.1| leucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064872|sp|B5XJI9|SYL_STRPZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209539925|gb|ACI60501.1| Leucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 833

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTELYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|189219552|ref|YP_001940193.1| Valyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186410|gb|ACD83595.1| Valyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 900

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 20/116 (17%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFL--------------LSANLPLPKKVFSHGFI 296
           ++ KF+P D+ V G DI+      W A +              L  N+P  +KV+  G I
Sbjct: 480 TRKKFYPTDVLVTGPDII----FLWVARMVIAGLEFKPSQTEDLQQNIPF-RKVYFTGLI 534

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
             K G K+SKSLGN  DPIE+I + G D LR+ L+R    G+D  +D+  +++  N
Sbjct: 535 RDKQGRKMSKSLGNSPDPIELINKYGADGLRFGLLRIAPQGQDIRFDESQIEEGRN 590


>gi|167718453|ref|ZP_02401689.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 945

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|17228813|ref|NP_485361.1| valyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81772420|sp|Q8YX97|SYV_ANASP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|17130665|dbj|BAB73275.1| valyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 1014

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 64/310 (20%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDIL 268
           ++  F   +++  DP  ++  W  +     +T G+ +  PD   AK++P    V G DI+
Sbjct: 450 AKSQFGENVQLEQDPD-VLDTWFSSGLWPFSTLGWPEQTPD--LAKYYPTTTLVTGFDII 506

Query: 269 RFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321
            F    W A +       +  +P  + V+ HG +     +K+SKS  N IDP+ +I++ G
Sbjct: 507 FF----WVARMTMMAGHFTGQMPF-QTVYIHGLVRDENNKKMSKSANNGIDPLLLIDKYG 561

Query: 322 VDALRYFLVREIA-CGKD-------------------GFYDK------------DGLKKR 349
            DALRY LVRE+A  G+D                    F +K            DGL   
Sbjct: 562 TDALRYTLVREVAGAGQDIRLEYDRKKDESPSVEASRNFANKLWNAARFVMMNLDGLS-- 619

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
              DL  G GN  S  +S      DG+ P     + +D  I+S   +V+++    + N  
Sbjct: 620 -TGDLGLGTGNSQSLELS------DGVPP-----SLADRWIISRYHQVIKQTTHYIDNYG 667

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  A   +   +     D Y +  K    K  +P            V+  +  LL  F+P
Sbjct: 668 LGEAAKGIYEFIWGDFCDWYIELVKSRLQKDADPLSRKAAQQTLAYVLEGILKLLHPFMP 727

Query: 468 KLANKIFDIL 477
            +  +I+  L
Sbjct: 728 HITEEIWQTL 737



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + D L R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFESALIDTLVRYHRMQGRNTLWLPGTD 87


>gi|220912738|ref|YP_002488047.1| leucyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859616|gb|ACL39958.1| leucyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 841

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 18/199 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 51  RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQQGFDVLHPIGWDSFGLPAENAAI 110

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA  +  T   +D  + +F+  A  +   +   + T++  ++   + L+K+  ++G  
Sbjct: 111 KRNAHPSEWTYTNIDTQAASFKRYA--ISADWSRRLHTSDPEYYRWTQWLFKRFYERGLA 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +  +D+    +++V  GA  +      + +  QW      +F+++ Y D+LL
Sbjct: 169 YRKNSPVNWCPKDQTVLANEQVVNGACERCGTVVTKKSLNQW------YFKITDYADRLL 222

Query: 178 SYYES----HPEFILPIER 192
              E      PE +L +++
Sbjct: 223 DDMEQLRGHWPERVLAMQK 241



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 27/199 (13%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D +K   W P   +V G +    H +Y   F        L+ A+ P    + + 
Sbjct: 539 YTEGPFDPAKINDWMPVGQYVGGVEHAILHLLYARFFTKVINDLGLIEASEPF-SALLNQ 597

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +L+ G+ +SKSLGN +D  E +++ GVDA+R  +V       D  +          AD
Sbjct: 598 GQVLNGGKAMSKSLGNGVDLGEQLDKYGVDAVRLTMVFASPPEDDVDW----------AD 647

Query: 354 LA-NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           ++ +G    ++R+  +       +  +PG   +  D  + SV  R + +  E +     +
Sbjct: 648 VSPSGSAKFLARAWRLAQD----VTSSPGTEASAGDRGLRSVTHRTIADAAELLDANKFN 703

Query: 412 RALAQVISLVSEVDRYFDA 430
             +A+++ LV+   +  D+
Sbjct: 704 VVVAKLMELVNATRKAIDS 722


>gi|86150800|ref|ZP_01069016.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841970|gb|EAQ59216.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 809

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY ++LL
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAYAEELL 201



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|327191133|gb|EGE58178.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 968

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 571 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 624

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 625 PY-NAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 670



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPI 108


>gi|222055264|ref|YP_002537626.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782500|sp|B9M9F3|SYL_GEOSF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221564553|gb|ACM20525.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 824

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  KSKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFKRMKGFNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    R     +  SY  D  + T    ++   ++++ ++ +KG  YK
Sbjct: 92  QHKSHPAKWTYENIDYMRGQLKKMGFSYDWDRELATCNVEYYKWEQLIFLQMLEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +  R E    +++V    DG  +    + V+  E E + FR++ Y ++LL    
Sbjct: 152 KKSSVNWCPRCETVLANEQV---EDGSCWRCD-SLVEQKELEQWSFRITDYAEELLEDTY 207

Query: 179 YYESHPEFILPIER 192
                PE +L ++R
Sbjct: 208 KLPGWPERVLTMQR 221



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 28/239 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D  K ++W   D ++ G +    H +Y   F            N P    + + G ++  
Sbjct: 520 DKGKTEYWMSVDQYIGGIEHAVMHLLYARFFTKVLRDLGYCDINEPF-TNLLTQGMVIKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP  +IE+ G D  R F +      KD  +   G+         N + 
Sbjct: 579 GSKMSKSKGNVVDPNALIEKYGADTARLFSLFAAPPEKDLDWSDQGVDGSYR--FLNRVW 636

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            LV   + +I     G +    A T+  +++  +  + ++++ ++++++   + A+A ++
Sbjct: 637 KLVYECLPLI--SATGPLDA-AALTDEGKTLRRLVHKTIRKVSDDIEDRFHFNTAIAAIM 693

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +V+ +  +    +P         R   VL    E +  + +LL  FVP  A ++++ L
Sbjct: 694 EMVNAIQAFEPKNQP---------RNVPVLK---EAVESVVLLLAPFVPHFAEELWESL 740


>gi|218459063|ref|ZP_03499154.1| valyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 262

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 23/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W A ++   L  
Sbjct: 8   VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHF 62

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+++E G DALR+ L    A
Sbjct: 63  MKDDDGNPVEPFSTVYVHALVRDKNGQKMSKSKGNVIDPLELVDEYGADALRFTLAIMAA 122

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D   D   +    N      + N  +R   M     D       A    +  IL+  
Sbjct: 123 QGRDVKLDPARIAGYRN--FGTKLWN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTEL 179

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +R  +++ E ++    + A   +   V +EV D Y +  KP      +    +     + 
Sbjct: 180 ARTERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDEGAKAEAQACSA 238

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++ ++  LL  F+P +  +++
Sbjct: 239 YILEEIYKLLHPFMPFMTEELW 260


>gi|83814107|ref|YP_446150.1| valyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294508074|ref|YP_003572132.1| Valyl-tRNA synthetase [Salinibacter ruber M8]
 gi|83755501|gb|ABC43614.1| valyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294344402|emb|CBH25180.1| Valyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 901

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 42/192 (21%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------- 221
           E   EF  P    NE   ++++ ++D  +SR+ + WG +IP                   
Sbjct: 390 EGEIEF-FPDRWANEYFRWMEN-IRDWCISRQLW-WGHRIPVWYYTDEHGEADPEQGYVV 446

Query: 222 --DDPQYIMYVWIDALTNYLT-------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
             D P+  M    D L  + +       T G+ +  D  + KF+P D+ V G DIL F  
Sbjct: 447 SIDQPEDGMVQETDVLDTWFSSWLWPFATLGWPEETDDLE-KFYPTDVLVSGYDILFF-- 503

Query: 273 IYWPAFLLSANL-----PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
             W A ++ A       P  K VF  G +   +G  +SKSLGN IDP+E++++ G DA R
Sbjct: 504 --WIARMIMAGYEFTGRPPFKNVFITGMVKDAQGRWMSKSLGNGIDPLEMVDQYGADATR 561

Query: 327 YFLVREIACGKD 338
           + L    A G+D
Sbjct: 562 FTLTLLCAQGQD 573



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVFVDQNSR 78
           HIGHA +  I D L R HR+ G + L+  G D  G     A ++       K   D    
Sbjct: 63  HIGHALQDSIQDALTRIHRMKGDETLWMPGLDHAGIATQNAVEDDLREAEGKTRHDLGRE 122

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTC 106
            F +        Y D I   ++   D+C
Sbjct: 123 AFVERVRAWKEEYGDLILDQKRTLGDSC 150


>gi|319897592|ref|YP_004135789.1| leucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433098|emb|CBY81472.1| leucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 861

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|170743946|ref|YP_001772601.1| valyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198220|gb|ACA20167.1| valyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 903

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 25/260 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +   A+++P    V G DI+ F         L A  
Sbjct: 472 VLDTWFSSGLWPFSTLGW---PEATPELARYYPTSTLVTGFDIIFFWVARMMMMGLHALG 528

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P + V+ H  +   KG K+SKS GNV+DP+++++  G DALR+ L    A G+D    
Sbjct: 529 EVPFRTVYIHALVRDEKGAKMSKSKGNVVDPLDLVDRYGADALRFTLAAMAAQGRD---- 584

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSV-----CSR 396
                 +++     G  N  ++  +     + +G    P    E+    L+       +R
Sbjct: 585 -----IKLSVQRVEGYRNFATKLWNAARFAEMNGCRIAPDFRPEAARETLNAWALGEAAR 639

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + E+   +     + A A     V  V  D Y +  KP    +  P +  T   V   +
Sbjct: 640 AVAEVTAALDAFRFNDAAAAAYRFVWNVFCDWYLELAKPVLQGEAGPAQDETRATVAF-L 698

Query: 455 IRQLAILLQAFVPKLANKIF 474
           I Q+ ILL  F+P L  +++
Sbjct: 699 IDQICILLHPFMPFLTEELW 718



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + DVLARF RL G DVL+  GTD           +AG+
Sbjct: 39 SIMIPPPNVTGSLHMGHALNNTLQDVLARFERLRGKDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERR 96


>gi|157115230|ref|XP_001658155.1| leucyl-tRNA synthetase [Aedes aegypti]
 gi|108876986|gb|EAT41211.1| leucyl-tRNA synthetase [Aedes aegypti]
          Length = 896

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I+D +ARF+RL+G +VL   G D  G     AA
Sbjct: 68  DKPKRYVLAMFPYPSGNLHMGHVRVYTISDAMARFYRLNGANVLHPMGWDAFGLPAENAA 127

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    +  QN    R+  ++L  S+D
Sbjct: 128 MQRKIPADKWTKQNIEQMREQLEMLQFSFD 157



 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 7/139 (5%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN-YLTTTGYLDNPDGSKAKFWPAD 259
           +S L D +LSR+     + +      +++++     N YL + G + +P+  K       
Sbjct: 490 QSELVDPTLSRRLMPVDLYVGGKEHAVLHMYYARFMNHYLHSKGLVSSPEPFKRLL--VQ 547

Query: 260 LHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGF---ILHKGEKISKSLGNVIDPIE 315
             V+G+   L+    Y PA  +        K         ++   EK+SKS  N +DP+E
Sbjct: 548 GMVMGRSYRLKGSGKYLPAAEVEVIDEKKNKAIEKATGAPVVALWEKMSKSKLNGVDPLE 607

Query: 316 VIEEVGVDALRYFLVREIA 334
           V++E G D LR  L+ ++A
Sbjct: 608 VLKEHGCDTLRMILLGDVA 626


>gi|70606414|ref|YP_255284.1| isoleucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|73920798|sp|P46215|SYI_SULAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68567062|gb|AAY79991.1| isoleucine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 1050

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 36/265 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+   +  + G     D  K  ++  P DL + G D LR  F ++     +L    P
Sbjct: 522 VWFDSGVAFFASLG----QDWRKRWSELGPVDLVLEGHDQLRGWFFSLLRTGVILMDKAP 577

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             + V  HGF+L  +G ++ KS GN ++P +V+ + G D LR +L+R        F  K 
Sbjct: 578 Y-EAVLVHGFMLDEQGREMHKSSGNYVEPSQVVSKYGRDTLRLWLLRNTTWEDAKFSWKS 636

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----------ILKDYDGMIPTPGAFTESDESILSV 393
               R + ++   +    +  +S+            +KDY  +          D  +LS 
Sbjct: 637 LDMTRRDLNIIWNVYVFANTYMSLDEFKYSKYSYNDIKDYLKL---------EDIWLLSR 687

Query: 394 CSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYF---DAQKPWELKKTNPDRASTVLY 449
             R+L+E+ E M+   +H    +V + ++ ++ R++     ++ W  +  +PD+ + + Y
Sbjct: 688 YYRMLKEVIEAMKEYKVHELANKVTAFIIDDISRFYLRVTRKRAWN-EANDPDKIA-MYY 745

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           V   V++   ILL   +P  A KI+
Sbjct: 746 VLYHVLKGSLILLSTVIPFTAEKIY 770



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 25/150 (16%)

Query: 15  YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-------------AK 60
           YP++  PHIG  +   I D + R+ RL G  V    G D HG  I             A+
Sbjct: 46  YPSSPIPHIGTVWNKTIKDCILRYERLMGYSVKDQPGYDTHGLPIEVETEKRLGIKSKAE 105

Query: 61  AAQNAGV-----TTKVFVDQNSR----NFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
             +  GV       K F   NS+    NFR++   +D  +++   T    +      + K
Sbjct: 106 IIEKVGVDNFISKCKEFAVNNSKSLTQNFRNLGIFMD--WENPYFTFNNDYISNSWAVIK 163

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           K  ++G +YKG +   +  R E    D EV
Sbjct: 164 KAYERGLLYKGVHVLHWCSRCETTLADYEV 193


>gi|229076249|ref|ZP_04209216.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228706898|gb|EEL59104.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|145641886|ref|ZP_01797460.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273365|gb|EDK13237.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 861

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|53718547|ref|YP_107533.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134281015|ref|ZP_01767724.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167814621|ref|ZP_02446301.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167823091|ref|ZP_02454562.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226194373|ref|ZP_03789971.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237811169|ref|YP_002895620.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|81824819|sp|Q63WI3|SYI1_BURPS RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52208961|emb|CAH34900.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134247321|gb|EBA47406.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|225933458|gb|EEH29447.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505211|gb|ACQ97529.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|116626598|ref|YP_828754.1| valyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122251483|sp|Q01PF1|SYV_SOLUE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|116229760|gb|ABJ88469.1| valyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 855

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 18/192 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      AK++P  L + G DIL F       F L     +
Sbjct: 448 VLDTWFSSGLWPFSTLGWPDQ-TADLAKYYPTTLLITGFDILFFWVARMVMFGLEFMGEV 506

Query: 287 P-KKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P K+V+ HG +     +K+SK+ GNVIDP+ V E+ G DA+R  L++  A G D    ++
Sbjct: 507 PFKQVYIHGLVRDADRQKMSKTKGNVIDPLVVTEKYGTDAVRMALLQGAAPGTDIVLTEE 566

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++       +    N +  +   +  + D     P   T  D  I+S         R N
Sbjct: 567 RMES------SRAFANKIWNAARFLFMNADQSAAAPAEPTIEDRWIVS---------RLN 611

Query: 405 MQNQLIHRALAQ 416
              +  +RA+ Q
Sbjct: 612 AAAETANRAIEQ 623


>gi|65319480|ref|ZP_00392439.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 1033

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+ L+ + A      F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSALWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  +
Sbjct: 746 TISKLIAPFTPFVAEDV 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|296170485|ref|ZP_06852072.1| valine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894837|gb|EFG74559.1| valine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 885

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 100/248 (40%), Gaps = 41/248 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                     +P    VF HG 
Sbjct: 477 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGADDAITLDGRRGPQVPF-TDVFLHGL 531

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I  + G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D +  R + + 
Sbjct: 532 IRDEFGRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAVSEDAV--RASRNF 589

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              + N    +    L +   + P P  G  T++D  IL     V  E+   +      R
Sbjct: 590 CTKLFN----ATRYALLNGAQLAPLPGHGELTDADRWILGRLEEVRTEVDAALDGYEFSR 645

Query: 413 ALAQVISLVSEVDRYFDAQKPW--ELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           A   +       D + D    W  EL KT   D  +    V   V+  L  LL   +P L
Sbjct: 646 ACEALYHFA--WDEFCD----WYVELAKTQLADGNAHTTAVLAAVLDTLLRLLHPVIPFL 699

Query: 470 ANKIFDIL 477
              ++  L
Sbjct: 700 TEALWQAL 707


>gi|86138606|ref|ZP_01057179.1| valyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824666|gb|EAQ44868.1| valyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 1035

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 11/104 (10%)

Query: 235 LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKK 289
            ++ L   G L  P+ S+  +K++P    V G+DIL F     +     +L  +LP+ ++
Sbjct: 601 FSSGLWPIGTLGWPEWSEETSKYFPTSTLVTGQDILFFWVARMMMMQLAVLDQDLPVEQR 660

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
                V+ HG +   KG+K+SKS GNV+DP+E+I+E G DALR+
Sbjct: 661 IPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEYGADALRF 704



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 53 HMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVER 96


>gi|254190884|ref|ZP_04897391.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938559|gb|EDO94229.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|297170267|gb|ADI21304.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_09F21]
          Length = 793

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 10/196 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+   H+GH     I D ++R+ RL G +VL   G D  G     A
Sbjct: 30  QNKPKFYCLSMLPYPSGNLHMGHVRNYTIGDAISRYKRLKGFNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  +  K + D+N ++       L  SYD    + T++  ++   + ++ K+ +KG  
Sbjct: 90  ALDKKIHPKKWTDENIKHMTKQLKSLGFSYDWSKEVNTSDVSYYKFEQEIFIKMFEKGLA 149

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  +      N+  +    DG+ +    + V+  E + +F +++ Y D+L S
Sbjct: 150 YRKKSMVNWDPIDKTVLANEQVI----DGKGWRTGADVVR-KEIDTWFLKITEYVDELES 204

Query: 179 YYE--SHPEFILPIER 192
             E    PE ++ +++
Sbjct: 205 GLEDIDWPENVVNMQK 220



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           +W P DL++ G +    H +Y   F        L+  + P  KK+ + G +L  G K+SK
Sbjct: 502 YWLPVDLYIGGVEHAILHLLYARFFHKVLRDMKLVEGDEPF-KKLLTQGMVLKDGAKMSK 560

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLV 330
           S GNV+DP + IE  G D++R F++
Sbjct: 561 SKGNVVDPEKYIELYGADSIRTFMI 585


>gi|291532768|emb|CBL05881.1| leucyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 797

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+AR+  ++G +VL   G D  G     AA 
Sbjct: 5   KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVIARYKTMNGFNVLHPMGFDAFGMPAENAAI 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV+   + + N  N       + +SY  D  + T  + ++   + L++    KG  YK
Sbjct: 65  KHGVSPSDWTEDNMANMTRQQKEMGLSYDWDRKVATCHEDYYKWTQWLFELFYKKGLAYK 124

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              S  +         +++V    DG+ +      V+  + E +F +++ Y D LL
Sbjct: 125 KKASANWCETCHTVLANEQV---IDGKCWRCDDTVVK-KDLEQWFLKITDYADVLL 176



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 48/266 (18%)

Query: 233 DALTNYLTTTGYL---DNPDGSKAKF-------W-PADLHVIGKDILRFHAIYWPAF--- 278
           D +  ++ ++ Y     +P   KA F       W P D ++ G +    H +Y   F   
Sbjct: 468 DTMDTFICSSWYYMRYADPHNDKAPFSKDAINYWLPVDQYIGGIEHAILHLLYSRFFTKV 527

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                L+  + P    + + G ++  G K+SKS GNV+ P E+I++ G D  R F++   
Sbjct: 528 LKDAGLVEFDEPF-TNLLTQGMVIKDGSKMSKSKGNVVSPEEIIKKYGADTARLFILFAA 586

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDES 389
              +D  +   G++         G    + R   +IL   D +   P     A T+ ++ 
Sbjct: 587 PPERDLEWSDQGVE---------GAWRFIQRVWRIILSYADKVKENPTFDVKALTKEEKE 637

Query: 390 ILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +  + +  ++++ E++  +   + A++ ++ LV+    + D      L +          
Sbjct: 638 LFRILNVTIEKVTEDIGTRSTFNTAISSIMELVNAFYVFKDGNLNAGLAR---------- 687

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
               EV+  L  LL  F P +  +++
Sbjct: 688 ----EVVINLIKLLAPFAPHVTEELW 709


>gi|149001632|ref|ZP_01826605.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237649676|ref|ZP_04523928.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821376|ref|ZP_04597221.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147760090|gb|EDK67079.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|99081547|ref|YP_613701.1| valyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99037827|gb|ABF64439.1| valyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 1031

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 16/118 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           +++  DP  ++  W    ++ L   G L  P+ ++  +K++P    V G+DIL F    W
Sbjct: 588 VQLRRDPD-VLDTW---FSSGLWPIGTLGWPEWTEETSKYFPTSTLVTGQDILFF----W 639

Query: 276 PAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            A ++   L +  +     V+ HG +   KG+K+SKS GNVIDP+E+I+E G DALR+
Sbjct: 640 VARMMMMQLAVVDQIPFDTVYLHGLVRDAKGKKMSKSTGNVIDPLEIIDEYGADALRF 697



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+ T++ V++
Sbjct: 69  HMGHAFNNTLQDILIRWKRMQGYDTLWQPGTD-----------HAGIATQMVVER 112


>gi|319940223|ref|ZP_08014575.1| leucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810525|gb|EFW06861.1| leucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 203

Query: 177 LSYYES--HPEFILPIER 192
           L   E+   PE I  ++R
Sbjct: 204 LEDLEALDWPESIKDMQR 221


>gi|240102739|ref|YP_002959048.1| valyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910293|gb|ACS33184.1| Valyl-tRNA synthetase (valS) [Thermococcus gammatolerans EJ3]
          Length = 888

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 24/266 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  +AK W     P  L   G DI+R  A Y  +  +
Sbjct: 451 VLDCWVDSSITPLIITRWHEAIKGDGEAKRWFEHNFPTALRPQGTDIIRTWAFYTIFRTY 510

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +L+   P  K +  +G +    G K+SKS GNV+ P EVI + G DALR +       G+
Sbjct: 511 MLTGQKPW-KDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTAL-APPGE 568

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +  + +    N      + N + R     L+D+D     P      D  ILS   R+
Sbjct: 569 DHPFKWETVD--YNFRFLQKVWN-IYRFAERHLEDFDPA-KAPEELEPLDRWILSRLHRL 624

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD---RASTVLYVTV 452
           ++   E M+    +    ++I+ V     D Y +  K + L   + +   +A   LY   
Sbjct: 625 IKFATEEMERYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKAALY--- 680

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E++  + +LL  FVP +  +++  LF
Sbjct: 681 ELLYNVMLLLAPFVPHITEELYQNLF 706



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG
Sbjct: 31 EKRPSYAIDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMTGYNVLFPQGFDNHG 84


>gi|229175455|ref|ZP_04302966.1| Leucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607987|gb|EEK65298.1| Leucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|224369811|ref|YP_002603975.1| LeuS [Desulfobacterium autotrophicum HRM2]
 gi|259511541|sp|C0QI75|SYL_DESAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|223692528|gb|ACN15811.1| LeuS [Desulfobacterium autotrophicum HRM2]
          Length = 863

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 16/188 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYLLEMFPYPSGKIHMGHVRNYTIGDVVVRYKRMKGFNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
           +       +  +N R  R     +  SY  D  I T    ++   + L+ K+ DK  +Y 
Sbjct: 92  DNNTHPAAWTYENIRTMRRQLKRMGFSYDWDREIATCRPEYYRWEQWLFLKMLDKDMVYR 151

Query: 121 KGCYSGWYSLRDEAYYND----DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           K  Y  W         N+    D  ++            PVQ  +   +FFR++ + + L
Sbjct: 152 KESYVNWCDHCQTVLANEQVEQDMCWRCG---------KPVQQKKLWQWFFRITDFAEDL 202

Query: 177 LSYYESHP 184
           L + +  P
Sbjct: 203 LVHCDKLP 210



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 21/180 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NVIDP  ++++ G D  R F +      KD  ++ DG++        N   N 
Sbjct: 618 KMSKSKKNVIDPNALLDQYGADITRLFCLFAAPPEKDLEWNDDGVEG------CNRFINR 671

Query: 362 VSRSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           V R        Y  ++P  G   +     + +    ++ ++++ ++++     + A++ V
Sbjct: 672 VWRLADRCKSTYIDLLPYSGVVADLKGEPKKLFIKANQTIKKVTDDIEESFHFNTAISAV 731

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV       +A    +L     D     L+     I  + +LL   VP    +++ IL
Sbjct: 732 MELV-------NAMYSADLDPDQTDMGEVALF----CIENIVLLLSPIVPHFCEELWSIL 780


>gi|167917909|ref|ZP_02505000.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|55981036|ref|YP_144333.1| isoleucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296710|sp|P56690|SYI_THET8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55772449|dbj|BAD70890.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) (IleRS)
           [Thermus thermophilus HB8]
          Length = 1043

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 7/186 (3%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+      +  Y    +    + +PAD    G D  R  F++++    +L  +
Sbjct: 513 YVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGS 572

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +   K V  HG IL  KG+K+SKS GNV+DP ++I E G DALR+++        D  + 
Sbjct: 573 IAF-KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYVSAPPEADRRFG 631

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
            + +++ V  D    + N+ S  V+    D   +   P P    E D  +L+    ++Q 
Sbjct: 632 PNLVRETVR-DYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQR 690

Query: 401 IRENMQ 406
           + E ++
Sbjct: 691 VTEALE 696


>gi|30262197|ref|NP_844574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527474|ref|YP_018823.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185038|ref|YP_028290.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872242|ref|ZP_02216880.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641057|ref|ZP_02399313.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708428|ref|ZP_02898871.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650879|ref|ZP_02933776.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567931|ref|ZP_03020842.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227815003|ref|YP_002815012.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229603474|ref|YP_002866548.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254721058|ref|ZP_05182849.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737212|ref|ZP_05194916.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751527|ref|ZP_05203564.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759042|ref|ZP_05211069.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81582455|sp|Q81R75|SYI2_BACAN RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|30256828|gb|AAP26060.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502622|gb|AAT31298.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178965|gb|AAT54341.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712035|gb|EDR17574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510955|gb|EDR86345.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126667|gb|EDS95551.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172083340|gb|EDT68401.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560986|gb|EDV14960.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004720|gb|ACP14463.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229267882|gb|ACQ49519.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 1033

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+ L+ + A      F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSALWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  +
Sbjct: 746 TISKLIAPFTPFVAEDV 762



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|16272858|ref|NP_439081.1| leucyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580010|ref|ZP_05847840.1| leucyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174531|sp|P43827|SYL_HAEIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1573943|gb|AAC22581.1| leucyl-tRNA synthetase (leuS) [Haemophilus influenzae Rd KW20]
 gi|260093294|gb|EEW77227.1| leucyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 861

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|53726229|ref|YP_103806.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67641265|ref|ZP_00440047.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121600067|ref|YP_993955.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124384509|ref|YP_001027020.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126448402|ref|YP_001081643.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452873|ref|YP_001065252.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|166998899|ref|ZP_02264751.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|242317301|ref|ZP_04816317.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254175326|ref|ZP_04881986.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202509|ref|ZP_04908872.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207844|ref|ZP_04914194.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356261|ref|ZP_04972537.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823943|sp|Q62HL4|SYI1_BURMA RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52429652|gb|AAU50245.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228877|gb|ABM51395.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124292529|gb|ABN01798.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226515|gb|ABN90055.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126241272|gb|ABO04365.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746756|gb|EDK53833.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751738|gb|EDK58805.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025258|gb|EDK83412.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160696370|gb|EDP86340.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238522164|gb|EEP85610.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242140540|gb|EES26942.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243064980|gb|EES47166.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|301169639|emb|CBW29240.1| leucyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 861

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDALPQW 212


>gi|322418887|ref|YP_004198110.1| valyl-tRNA synthetase [Geobacter sp. M18]
 gi|320125274|gb|ADW12834.1| valyl-tRNA synthetase [Geobacter sp. M18]
          Length = 888

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 44/244 (18%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ ++    ++ L+  +     I+P +  N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 362 WYVKVGPLAERALAAVKDGRTRIVPQQWENTYYDWMEN-IRDWCISRQIW-WGHRIPAWY 419

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP                ++  W  +     +T G+ +      A F+
Sbjct: 420 CDHCGHITVAKEDPTSCDQCGSDEIRQETDVLDTWFSSALWPFSTMGWPEKTP-ELASFY 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNV 310
           P    V G DIL F    W A ++   L    +V     + H  +   +G+K+SKS GNV
Sbjct: 479 PTSCLVTGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVRDAQGQKMSKSKGNV 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+ VIE  G DA R+ L    A G+D    ++ +    N   AN I N  SR   M L
Sbjct: 535 IDPLTVIEAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRN--FANKIWN-ASRFAMMNL 591

Query: 371 KDYD 374
           + +D
Sbjct: 592 EGFD 595



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G
Sbjct: 41 SIVIPPPNITGVLHMGHALNNTLQDILCRWKRMSGYNVLWMPGTDHAG 88


>gi|229032397|ref|ZP_04188367.1| Leucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728899|gb|EEL79905.1| Leucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|167632914|ref|ZP_02391240.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170686512|ref|ZP_02877733.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254684765|ref|ZP_05148625.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254743603|ref|ZP_05201288.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167531726|gb|EDR94391.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170669588|gb|EDT20330.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 1033

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+ L+ + A      F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSALWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++  L+ +  +   + + N+ S  V    L +Y+         T+ DE +LS      ++
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKK 688

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           +R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ +V+ 
Sbjct: 689 VRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YETLHDVLV 745

Query: 457 QLAILLQAFVPKLANKI 473
            ++ L+  F P +A  +
Sbjct: 746 TISKLIAPFTPFVAEDV 762



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|187250619|ref|YP_001875101.1| leucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238064868|sp|B2KB05|SYL_ELUMP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|186970779|gb|ACC97764.1| Leucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 835

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 21/198 (10%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y      YP+ Q  H+GH      +D+L R+ ++ G DV+   G D  G      A  
Sbjct: 33  KFYCLDMFPYPSGQGLHVGHPEGYTASDILVRYKKMKGFDVIHPMGWDAFGLPAENYAIA 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV   +    N  NFR     L ++YD    I TT+  ++   + ++ +I  KG  Y+ 
Sbjct: 93  TGVHPAITTKNNIDNFRRQIKSLGMAYDWTREIDTTDPNYYRWTQWIFLQIFKKGLAYES 152

Query: 123 ------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                 C S    L +E  +N +    G   +  N +    QW+       +++ Y D+L
Sbjct: 153 TVPINWCPSCKTGLANEEVFNGNCERCGTKIESKNIR----QWV------LKITEYADRL 202

Query: 177 LSYYES--HPEFILPIER 192
           L   E    PE  L ++R
Sbjct: 203 LEDLEGLDWPESTLAMQR 220


>gi|71852743|gb|AAZ50766.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 795

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 14/186 (7%)

Query: 15  YPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A + G     F 
Sbjct: 4   YPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPAEFT 63

Query: 74  DQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG-CYSGWYSL 130
            +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y+      W   
Sbjct: 64  AENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEE 123

Query: 131 RDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEF 186
              A  N++ +  G    G Y   +    QWM       +++AY ++LL   E    PE 
Sbjct: 124 LGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLLEDLEEVDWPES 177

Query: 187 ILPIER 192
           I  ++R
Sbjct: 178 IKDMQR 183


>gi|167737503|ref|ZP_02410277.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|161507322|ref|YP_001577276.1| isoleucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048227|sp|A8YUP7|SYI_LACH4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160348311|gb|ABX26985.1| Isoleucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 927

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 523 ILDVWFDSGSSW---SGVMEKRDGLH---YPADLYLEGSDQYRGWFNSSLITSVAVTGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 577 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 623



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|21909670|ref|NP_663938.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895049|ref|NP_801399.1| leucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|32171567|sp|Q8K8S1|SYL_STRP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21903853|gb|AAM78741.1| putative putative leucyl-tRNA synthetase [Streptococcus pyogenes
           MGAS315]
 gi|28810294|dbj|BAC63232.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++ Y ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITVYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEEVDWPESIKDMQR 221


>gi|260102621|ref|ZP_05752858.1| isoleucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083575|gb|EEW67695.1| isoleucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 927

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 523 ILDVWFDSGSSW---SGVMEKRDGLH---YPADLYLEGSDQYRGWFNSSLITSVAVTGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 577 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 623



 Score = 37.4 bits (85), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|269120241|ref|YP_003308418.1| valyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614119|gb|ACZ08487.1| valyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 883

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 14/154 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRF---HAIYWPAFLLS 281
           ++  W  +     +T G+   P+ +K   KF+P D  V   DI+ F     I    +L  
Sbjct: 452 VLDTWFSSQLWPFSTMGW---PEKTKDFEKFFPTDALVTAADIIFFWVSRMIMISEYLFD 508

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +P  K V+ +G +   KG K+SK+LGN  DP+++I++ G DA+R+ L+   + G+D F
Sbjct: 509 -EIPF-KYVYLNGIVRDEKGRKMSKTLGNSPDPLDLIDKYGADAIRFSLLYNTSQGQDIF 566

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +  L+  + A+ +N + N  S+ V   L+D+D
Sbjct: 567 FSEKLLE--MGANFSNKVWN-ASKFVLQNLEDFD 597



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           EK   S  I  PN     H+GH     I D + R+ R+ G D L+  GTD  G     K+
Sbjct: 34  EKPGYSIVIPPPNVTGILHMGHILNNSIQDTMIRWKRMSGFDALWMPGTDHAGIATQNKV 93

Query: 59  AKAAQNAGVTT-----KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRH 102
            K     G T      + F+++            ++  R +   LD   + F  T ++  
Sbjct: 94  EKWLMEEGTTKEEIGREKFLERTWEWKEKHGGIITKQLRRLGSSLDWKRERF--TMDEGL 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            D  + ++ ++ +   IYKG Y   +  +D+    DDE+
Sbjct: 152 SDAVKDVFIRLYNDDLIYKGEYIVNWCPKDKTALADDEI 190


>gi|229087291|ref|ZP_04219433.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695993|gb|EEL48836.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNSPAEFTEKNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL 
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYE--SHPEFILPIER 192
             E    PE +  ++R
Sbjct: 204 DLEDLDWPESLKDMQR 219



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|71892094|ref|YP_277824.1| leucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123761476|sp|Q492Z3|SYL_BLOPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71796200|gb|AAZ40951.1| leucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 872

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 14/181 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + I YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMIPYPSGNLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEHAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-----ISDKG 117
                   ++   N    +     L  +Y D+ R     H D  R  W++     +  KG
Sbjct: 91  IKNNTDPSIWTYSNINYMKSQLQSLGFAY-DWNRELITCHPDYYR--WEQWFFTVLYKKG 147

Query: 118 DIYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            +YK   S  W S       N ++V      +     H PV++     +F R++ Y D+L
Sbjct: 148 LVYKKTASVNWCSYHKTVLAN-EQVTNNCCWRC----HTPVKYKRIPQWFIRITNYADQL 202

Query: 177 L 177
           L
Sbjct: 203 L 203


>gi|323466796|gb|ADX70483.1| Isoleucyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 929

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 525 ILDVWFDSGSSW---SGVMEKRDGLH---YPADLYLEGSDQYRGWFNSSLITSVAVTGQA 578

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 579 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 625



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K  
Sbjct: 60  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 117


>gi|316984442|gb|EFV63415.1| isoleucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 809

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 56/301 (18%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE            H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQECLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-------FQSLDQRLKPG 496
           A T LY    + R L +L+   +     + +DI+   +E+         F +++++ KP 
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKPKPN 808

Query: 497 F 497
           +
Sbjct: 809 W 809



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|229019973|ref|ZP_04176765.1| Leucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026208|ref|ZP_04182570.1| Leucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735092|gb|EEL85725.1| Leucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741322|gb|EEL91530.1| Leucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|68249507|ref|YP_248619.1| leucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336066|sp|Q4QLY8|SYL_HAEI8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68057706|gb|AAX87959.1| Leucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 861

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDALPQW 212


>gi|163942470|ref|YP_001647354.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229559883|sp|A9VLA2|SYL_BACWK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163864667|gb|ABY45726.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|307544817|ref|YP_003897296.1| leucyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216841|emb|CBV42111.1| leucyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 860

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 14/182 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  DREKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYQRMQGKNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  QN    R     L  +YD   +F  T +  ++   +  + K+ +KG +
Sbjct: 91  IQNQVPPARWTQQNIETMRAQLKSLGFAYDWSREFA-TCDSDYYRWEQWFFTKLVEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK      +   D+    +++V +G     G     +  P+       +F +++ Y ++L
Sbjct: 150 YKKMSMVNWDPVDQTVLANEQVIEGRGWRSGALVERKEIPL-------WFLKITDYAEEL 202

Query: 177 LS 178
           L+
Sbjct: 203 LA 204


>gi|218661213|ref|ZP_03517143.1| isoleucyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 534

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 137 ILDVWFDSGSTHTFTLE--DRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 190

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 191 PY-DAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 236


>gi|182415676|ref|YP_001820742.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842890|gb|ACB77142.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 857

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 11/180 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  HIGH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 35  KPKFYVLDMFPYPSGAGLHIGHPEGYTATDILARAKRAQGFNVLHPIGWDAFGLPAEQHA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G         N  NFR     L  SYD    I TT+ ++    + ++ ++  +G  Y
Sbjct: 95  VKTGTHPATNTQNNITNFRRQIKALGFSYDWEREIDTTDPKYFRWTQWIFLQLFKRGLAY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 W+         ++EV  G    G +   + N  QW+       R++AY ++LL+
Sbjct: 155 VDERPVWWCPELRTVLANEEVVDGKSEVGGFPVERRNLRQWV------LRITAYAERLLA 208



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 20/119 (16%)

Query: 228 MYVWIDALTNYLTTTGYLD--NPDGSKA----KFWPA-DLHVIGKDILRFHAIY---WPA 277
           M  W  +   YL    +LD  NPD   +    ++W   DL+V G +    H +Y   W  
Sbjct: 540 MPQWAGSCWYYLR---FLDPKNPDAIASPEALRYWGVPDLYVGGAEHAVLHLLYARFWHK 596

Query: 278 FLLSANLPLPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            L    + +P+     ++F  G IL + GEK+SKS GNV++P  +I   G D LR +L+
Sbjct: 597 VLFDLGV-VPQSEPFTRLFHQGIILGEDGEKMSKSRGNVVNPDTIIASHGTDTLRLYLM 654


>gi|225164049|ref|ZP_03726334.1| leucyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224801355|gb|EEG19666.1| leucyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 278

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 11/182 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+ A  HIGH       D++AR+ R  G +VL   G D  G    +
Sbjct: 40  QPKPKYYVLDMFPYPSGAGLHIGHPEGYTATDIIARYKRARGYNVLHPIGWDAFGLPAEQ 99

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G         N  NFR     L  SYD    I TT+ R+    + ++ ++  +G 
Sbjct: 100 HAVKTGTHPASNTQNNIANFRRQIKALGFSYDWEREIDTTDPRYFKWTQWIFLQLFKRGL 159

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      W+         ++E+  G    G +   + N  QW+       R++AY ++L
Sbjct: 160 AYVDERPVWWCPELRTVLANEEIVDGKSEVGGFPVERRNLRQWV------LRITAYAERL 213

Query: 177 LS 178
           LS
Sbjct: 214 LS 215


>gi|167901637|ref|ZP_02488842.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217419606|ref|ZP_03451112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396910|gb|EEC36926.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|148994596|ref|ZP_01823738.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489731|ref|ZP_02713930.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927126|gb|EDK78164.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183571788|gb|EDT92316.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075921|gb|EGI86388.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|126442280|ref|YP_001058018.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126221773|gb|ABN85279.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|225023694|ref|ZP_03712886.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
 gi|224943576|gb|EEG24785.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
          Length = 927

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 58/291 (19%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     M VW D+ + + +       P+ +    WPADL++ G D    H  ++ + 
Sbjct: 528 KLPD----TMDVWFDSGSTHFSVLK--QRPELA----WPADLYLEGSDQ---HRGWFQSS 574

Query: 279 LLSANLPLP----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-- 331
           +L+    L     K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +     
Sbjct: 575 MLTGCATLGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAATD 634

Query: 332 ---EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD- 387
              E+A  K+       + KRV           +  ++S +  +     P   A  ++D 
Sbjct: 635 YSGELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLKDFNPIEDAVPQADM 682

Query: 388 ---ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQK 432
              +    V +R LQE     +      H A+  ++   SE           DR +  +K
Sbjct: 683 VEIDRYALVLARQLQEKVSGSHYPRYAFHFAVQDIVQFCSEDLGAFYLDILKDRLYTTKK 742

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +++    A T LY    + R L +L+   +   A + +DI+   +E+
Sbjct: 743 DGHARRS----AQTALY---HITRSLVLLMSPILCFTAEEAWDIIGGGEED 786



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|146296824|ref|YP_001180595.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166230621|sp|A4XKG9|SYL_CALS8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145410400|gb|ABP67404.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 817

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLKELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITKYAERLL 201



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 109/241 (45%), Gaps = 36/241 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           + S   +W P D ++ G +    H +Y   F         +S   P  K + + G +L  
Sbjct: 517 EKSLVDYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYISFEEPF-KNLLTQGMVLKD 575

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN++ P E++E+ G D  R F++      +D  +   G++         G  
Sbjct: 576 GAKMSKSLGNIVSPEEIVEKYGADTARLFILFAAPPERDLEWSDQGVE---------GCF 626

Query: 360 NLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
             ++R   + + LKD       PG  +E D+ +    +  ++++ E++  +   + A++ 
Sbjct: 627 RFLNRLWRLYIELKDKLSDSSLPGQ-SELDDELNYRLNYTIKKVTEDIGERFNFNTAISS 685

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L++ +  Y              ++ S    + ++ ++   IL+  F P +A ++++I
Sbjct: 686 IMELLNFLYDY-------------KEKGSLNRELILKTLKNFLILIYPFTPHIACELWEI 732

Query: 477 L 477
           +
Sbjct: 733 M 733


>gi|320592093|gb|EFX04532.1| leucyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 1005

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 40/85 (47%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IAD +ARFHRL G DVL   G D  G     AA   G+
Sbjct: 95  YVLPMFPYPSGNLHLGHLRVYTIADAIARFHRLQGCDVLLPMGFDSFGLPAENAALQRGI 154

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD 92
               +   N  N +    V++ S+D
Sbjct: 155 QPAAWTRANIANMKAQLGVMNGSFD 179


>gi|294499492|ref|YP_003563192.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294349429|gb|ADE69758.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 1031

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 13/259 (5%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENNELFQKQF-PADVIAEGIDQTRGWFYSLMAVSTLFTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K+V S G +L   G+K+SKS GN +DP+++I   G DALR+ L+ + A      + 
Sbjct: 572 APY-KRVLSLGHVLDENGQKMSKSKGNALDPVDLIHTFGADALRWALLADSAPWNPKKFS 630

Query: 343 K---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +      K +V   L N  G  V   +   L  YD         T+ DE ILS     ++
Sbjct: 631 ERVVQEAKSKVIDTLVNVYGFYV---LYAKLDGYDPEQTYELKKTKLDEWILSRLHSTVK 687

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQL 458
            +  ++++     A  ++   + E+  ++  +          D      Y T+ EV+  L
Sbjct: 688 RVTAHLEDYGFTSAAREIAVFIEELSNWYVRRSRDRFWSEGMDGEKAAAYDTLHEVLVTL 747

Query: 459 AILLQAFVPKLANKIFDIL 477
           + LL  F P +A+ I + L
Sbjct: 748 SQLLAPFTPFVADDIHENL 766



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTK----- 70
           N  PH+GHA    I DV+AR+  + G  V+   G D HG  +    +   G++ K     
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMTGHQVIRKAGWDTHGLPVELGVEKQLGISGKHDIEK 109

Query: 71  ----VFVDQN-------SRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                F+++         + +R   + L   +  +D   T E  + ++   +   I DKG
Sbjct: 110 YGVEAFINKCKESVFVYEKQWRTFTEQLGYWVGMEDPYITLENSYIESVWNVLGTIHDKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|229099219|ref|ZP_04230151.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105374|ref|ZP_04236019.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229118233|ref|ZP_04247590.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665205|gb|EEL20690.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228678031|gb|EEL32263.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228684200|gb|EEL38146.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|238855309|ref|ZP_04645627.1| leucine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664289|ref|ZP_05865142.1| leucyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282931921|ref|ZP_06337390.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472480|ref|ZP_07812972.1| leucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832079|gb|EEQ24398.1| leucine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529914|gb|EEQ68915.1| leucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260562175|gb|EEX28144.1| leucyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303951|gb|EFA96084.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   +K+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHDKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVIEE G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   I +     E+D S+  V ++ ++++ E+ +N   + A++Q++  V+E  
Sbjct: 629 RLFVNDLDLDPIVSDKVVKENDGSLDKVYNQTVKKVTEDFENLHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G    +  D+N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGQDPAIVTDENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   ++L  SY  D  +RT++   +   + +++++   G  Y+      +S        +
Sbjct: 107 KKQLNMLGFSYDWDREVRTSDPNFYKWTQWVFEQMYKMGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|148996678|ref|ZP_01824396.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576317|ref|ZP_02722200.1| leucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307066932|ref|YP_003875898.1| leucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147757253|gb|EDK64292.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577874|gb|EDT98402.1| leucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408469|gb|ADM83896.1| Leucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|145628147|ref|ZP_01783948.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979922|gb|EDJ89581.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 434

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            +  P++
Sbjct: 206 LDPLPQW 212


>gi|325266762|ref|ZP_08133435.1| leucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981764|gb|EGC17403.1| leucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 876

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV +RF ++ G +VL   G D  G     AA 
Sbjct: 32  KPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKMQGFNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N  V    +  +N    R     L  + D    I T    ++   ++L+ K+ +KG +YK
Sbjct: 92  NHQVAPSKWTYENIAYMRKQLQSLGFALDWEREIATCRPEYYRWEQLLFTKLFEKGIVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KLGTVNWDPIDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYFKITDYAEQLLA 204



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L  T Y ++ DG K  F PA++ V   D  R          +SA L    ++   G +  
Sbjct: 583 LAATYYRESADGKKTWFNPAEVRVQTDDKGR---------PVSAVLEADGQLVVIGGV-- 631

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             EK+SKS  N +DP ++I+  G D  R F++
Sbjct: 632 --EKMSKSKNNGVDPQQIIDAYGADTARLFMM 661


>gi|320355122|ref|YP_004196461.1| valyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123624|gb|ADW19170.1| valyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 894

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 31/268 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +N     A F+P  + +   DIL F    W A ++   L  
Sbjct: 458 VLDTWFSSALWPFSTLGWPENTK-ELATFYPTSVLITSFDILFF----WVARMMMMGLHF 512

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +V  H   LH       G+K+SKS GNVIDP+ +I + G DA R+ L    A G++  
Sbjct: 513 MDEVPFHDVYLHALVRDKFGKKMSKSTGNVIDPLVMIGQYGTDAFRFTLTAFAAQGREIR 572

Query: 341 YDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSV 393
            D+   DG ++ +N  L N      +R   M LK+ D  I      P     +   ILS 
Sbjct: 573 MDEERIDGYRRFIN-KLWNA-----ARFAQMHLKEADPAITALAADPEKLALAHRWILSR 626

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLY 449
            +  + E+R  +     +   +     V     D Y +  K   +    T  D+A  VL 
Sbjct: 627 INGTIAEVRAALDGYNFNEVASASYQFVWHEFCDWYLEWIKADLFSDDATARDQAKAVL- 685

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             + V+ Q+  L+    P +  +I+  L
Sbjct: 686 --LTVLEQVLKLMHPICPFVTEEIWSQL 711



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 35/180 (19%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           E  +   S  I  PN     HIGHA    + D+L R+HR+ G + L+  GTD  G     
Sbjct: 42  EEGRPSFSIVIPPPNVTGVLHIGHALNNTLQDLLVRYHRMKGDNTLWVPGTDHAG----I 97

Query: 61  AAQNAGVTTKVFVDQNSRN-------------------------FRDMADVLDISYDDFI 95
           A QN  V  ++  +Q SR+                          + M    D   + F 
Sbjct: 98  ATQNV-VERQLASEQLSRHDLGRERFIERVWAWKEEKGGTIINQLKRMGASCDWDRERF- 155

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            T ++      R ++ ++  +G IYKG Y   +  R      DDEV +   DG+ Y+ ++
Sbjct: 156 -TMDEGLSKAVREVFVRLYKEGLIYKGDYIVNWCPRCHTALADDEVEHDPTDGKLYHIRY 214


>gi|303259306|ref|ZP_07345284.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261062|ref|ZP_07347011.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263390|ref|ZP_07349313.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265555|ref|ZP_07351455.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303267887|ref|ZP_07353689.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301801197|emb|CBW33871.1| leucyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302637899|gb|EFL68385.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639724|gb|EFL70181.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642583|gb|EFL72928.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644995|gb|EFL75242.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302647163|gb|EFL77387.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|218506119|ref|ZP_03503997.1| isoleucyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 171

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 52  ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 105

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 106 PY-DAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 151


>gi|116251795|ref|YP_767633.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256443|emb|CAK07527.1| putative valyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 947

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W A ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDEDGEPVEPFQTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|229169475|ref|ZP_04297180.1| Leucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613974|gb|EEK71094.1| Leucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|114705798|ref|ZP_01438701.1| isoleucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538644|gb|EAU41765.1| isoleucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 1021

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  FH+    +       P    V +HGF++  +G K+SKSLGNV+ 
Sbjct: 641 WPADLYLEGSDQHRGWFHSSLLESCGTRGRAPY-NAVLTHGFVMDEEGRKMSKSLGNVVT 699

Query: 313 PIEVIEEVGVDALRYFLV 330
           P EVI++ G D LR ++V
Sbjct: 700 PQEVIKQSGADILRLWVV 717



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           + R K  +     Y N   HIGHA   ++ DV+ R  ++ G D  +  G D HG  I
Sbjct: 59  RGRPKYVLHDGPPYANGNLHIGHALNKVLKDVITRAFQMRGYDSNYVPGWDCHGLPI 115


>gi|194335787|ref|YP_002017581.1| leucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229559998|sp|B4SDX3|SYL_PELPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194308264|gb|ACF42964.1| leucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 807

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH      +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGTGLHVGHLEGYTASDITARYKRSCGYNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N RNF+     +  SYD    I TT+  +    + ++ K+ ++G  
Sbjct: 89  AIKTGTHPKTTTEENIRNFKGTLQAMGFSYDWSREINTTDPHYFKWTQWIFLKLYERGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++   K ADG  Y     P+ QW+       +++AY D+LL
Sbjct: 149 YMSEVDVNWCEELKTVLANEEVDEKIADG--YTVVRRPLRQWV------LKITAYADRLL 200

Query: 178 S 178
           +
Sbjct: 201 A 201



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 41/237 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K ++W   DL++ G +    H +Y   W   L     +S+  P  KK+F+ G IL +
Sbjct: 514 DPEKERYWMNVDLYIGGAEHAVLHLLYARFWHKVLFDLGVVSSREPF-KKLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V+E  G DA+R +         + F       K  N +   GI
Sbjct: 573 DNEKMSKSRGNVIPADHVLERYGADAVRLY---------EMFLGPLEQVKPWNTNGIEGI 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +S+   ++  +++    T  +     E +L    + ++++ E+ +    + A+++++
Sbjct: 624 SRFLSKVWRLVYGEHEESA-TLLSEEAMPEELLRRMHKSIKKVGEDTEQLKFNTAISEMM 682

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             V+            EL+K+     S         I  L +LL  + P +  ++++
Sbjct: 683 VFVN------------ELQKSGCKNRS--------AIETLLVLLSPYAPHITEELWE 719


>gi|125718618|ref|YP_001035751.1| valyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498535|gb|ABN45201.1| Valyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 890

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +++P    V G DI+ F    W + ++   L  
Sbjct: 451 VLDTWFSSALWPFSTMGWPDVDSEDFKRYYPTSTLVTGYDIIPF----WVSRMIFQGLEF 506

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K    HG I   +G K+SKSLGN IDP++V+++ G D+LR+FL    A G+D  
Sbjct: 507 TGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVVDKYGTDSLRWFLSNGSAPGQDVR 566

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +  + +    N    N I N +SR + M
Sbjct: 567 FSYEKMDASWN--FINKIWN-ISRYILM 591



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 48  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 107

Query: 64  NAGVT-----TKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G++      + F+D+               +  M   +D S + F  T ++      R
Sbjct: 108 EQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 165

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ ++  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 166 KVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 213


>gi|23099762|ref|NP_693228.1| leucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|32171556|sp|Q8EP12|SYL_OCEIH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22777992|dbj|BAC14263.1| leucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 804

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ Q  H+GH       D+LAR  R+ G +V+   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGYEVMHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G +   F +QN   F+     L  SY  D  I TT+  ++   + ++KK+ +    Y
Sbjct: 90  IDTGNSPAEFTNQNINTFKRQIKELGFSYDWDREINTTDPNYYKWTQWIFKKLYENDLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  W         N++ +    DG+     H PV     + +  +++AY D+LL
Sbjct: 150 MDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVIRKPMKQWMLKITAYADRLL 202



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHKG-EKISKSL 307
           P D+++ G +    H +Y   W  FL     +S   P  +K+++ G IL +G EK+SKS 
Sbjct: 523 PIDIYIGGAEHAVLHLLYARFWHKFLFDIGVVSTKEPF-QKLYNQGMILGEGNEKMSKSK 581

Query: 308 GNVIDPIEVIEEVGVDALRYF 328
           GNV++P ++I+  G D LR +
Sbjct: 582 GNVVNPDDIIDSHGADTLRLY 602


>gi|325963359|ref|YP_004241265.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469446|gb|ADX73131.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 842

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 18/199 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 52  RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGYDVLHPIGWDSFGLPAENAAI 111

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA  +  T   +D  + +F+  A  +   +   + T++  ++   + L+K+  ++G  
Sbjct: 112 KRNAHPSEWTYANIDTQAASFKRYA--ISADWSRRLHTSDPEYYRWTQWLFKRFYERGLA 169

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +  +D+    +++V  GA  +      + +  QW      +F+++ Y D+LL
Sbjct: 170 YRKNSPVNWCPKDQTVLANEQVVNGACERCGTTVTKKSLNQW------YFKITEYADRLL 223

Query: 178 SYYES----HPEFILPIER 192
              E      PE +L +++
Sbjct: 224 DDMEQLRGHWPERVLAMQK 242



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 16/143 (11%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L+ G+ +SKSLGN +D  E +++ GVDA+R  ++       D  +        
Sbjct: 595 LLNQGQVLNGGKAMSKSLGNGVDLGEQLDKYGVDAVRLTMIFASPPEDDVDW-------- 646

Query: 350 VNADLA-NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQN 407
             AD++ +G    ++R+  +       +   PG   T  D  + S+  R + +  E +  
Sbjct: 647 --ADVSPSGSAKFLARAWRLA----QDVASEPGVDVTTGDRGLRSITHRTIADAAELLDA 700

Query: 408 QLIHRALAQVISLVSEVDRYFDA 430
              +  +A+++ LV+   +  DA
Sbjct: 701 NKFNVVVAKLMELVNATRKAIDA 723


>gi|291556706|emb|CBL33823.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Eubacterium siraeum V10Sc8a]
          Length = 801

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 7/182 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       +V++R  RL G +VLF  G D +G      A
Sbjct: 33  KPKFYALVEFPYPSGAGMHVGHIKAYSGLEVVSRKRRLQGYNVLFPIGFDAYGLPTENTA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  +   D N   F +    +  S+D    I TTE+R++   + ++ K+ + G ++
Sbjct: 93  IKTGVHPRKVTDNNIVKFTNQLKRVGFSFDWSRVIDTTEERYYKWTQWIFLKMFEHGLVF 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y    +   ++++    + G + +  H+ +    +E ++ R++ Y DKLL   
Sbjct: 153 RDKTLVNYCPSCKVVLSNED----SQGGHCDICHSEIVQKTKEVWYLRITEYADKLLQGL 208

Query: 181 ES 182
           E+
Sbjct: 209 ET 210



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 56/238 (23%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLS-ANLPLPK---KVFSHGFILHK-GEKIS 304
           K+W P D +  G + +  H IY   W  FL     +P P+   K  + G IL   GEK+S
Sbjct: 525 KYWLPVDWYNGGMEHVTRHMIYSRFWHKFLYDIGEVPTPEPYAKRTAQGLILGPDGEKMS 584

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLV 362
           KS GNVIDP +V++  G D LR +++      +   ++   +K  KR   D    + N++
Sbjct: 585 KSRGNVIDPNDVVDVYGADVLRVYVLFMGDYEQAAPWNDSSMKGCKRF-LDRVWNLQNML 643

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R                    E  + + +   + ++++ E+++    + A+A ++SL++
Sbjct: 644 VRG------------------DEYSDELRTSMHKTIKKVSEDIEKMRFNTAIAAMMSLIN 685

Query: 423 EV---DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E+    +  DA+                       ++ L ILL  F P +  ++++ L
Sbjct: 686 EITANGKINDAE-----------------------MKSLLILLNPFAPHITEEMYNSL 720


>gi|229135583|ref|ZP_04264363.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647856|gb|EEL03911.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|218960598|ref|YP_001740373.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729255|emb|CAO80166.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 882

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 55/351 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F +++   +K +   E+  E     ER  +V     + ++D  +SR+ + WG +IP   
Sbjct: 360 WFVKMAPLAEKAIEVVENG-EIKFQPERWTKVYMHWMNNIRDWCISRQIW-WGHRIPVYY 417

Query: 222 -DDPQYIMY------------------------VWIDALTNYLTTTGYLDNPDGSKAKFW 256
            D   Y++                          W  +     +T G+ D     K ++ 
Sbjct: 418 CDHCSYMIVAKEIPEKCPKCGGTKFTQDSDVLDTWFSSWLWPFSTMGWPDETADLK-RYL 476

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNV 310
           P+++ +   +I+      W A ++ + L    K+     +LH       G K+SKSLGN 
Sbjct: 477 PSNVLITAPEIIYL----WVARMIMSTLHFVDKIPFDTVLLHGTVRDEIGRKMSKSLGNS 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
            DPI++I  VG DALR+ ++     G D  + +  L+   N   AN + N   R + M  
Sbjct: 533 PDPIDLINTVGADALRFSMIFGTPKGADVIFSESILETGRN--FANKMWN-AYRFIMMNA 589

Query: 371 KDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           ++ +G+        E +D+ I+S    V+  +R + +N   + A  ++   + +     Y
Sbjct: 590 ENIEGLPAENELQLELADKWIISRLQEVIIAVRAHYENLRFNDAATEIFKFMWDEFCSWY 649

Query: 428 FDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K     + NP  A     T  Y+ + V++    LL   +P +  +I+
Sbjct: 650 IELSK----DRLNPSSALSSRLTAKYILLYVMQTGMRLLHPIMPFITEEIW 696



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 19/149 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVT-------- 68
           HIGH     + DV+ R+HR+ G   L+  G D  G      + K     G+T        
Sbjct: 51  HIGHVLNNTLQDVVVRYHRMKGEPTLWLPGVDHAGIATQNMVEKELAKQGITRQELGREK 110

Query: 69  --TKVFVDQNSRN--FRDMADVLDISYD-DFIR-TTEKRHHDTCRILWKKISDKGDIYKG 122
              K++  +N +     D   +L  S D D +R T ++      + ++  + ++G IYKG
Sbjct: 111 MVEKIWQWKNEKGNIIIDQLKLLGASCDWDRLRFTMDEMLSRAVKEVFVALYEEGLIYKG 170

Query: 123 CY-SGWYSLRDEAYYNDDEVYKGADGQYY 150
            Y   W      A  ND+  +   +G  +
Sbjct: 171 KYIINWCPRCVTALANDEVEHTDENGHLW 199


>gi|76809344|ref|YP_332534.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254181497|ref|ZP_04888094.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254258530|ref|ZP_04949584.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|76578797|gb|ABA48272.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|184212035|gb|EDU09078.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254217219|gb|EET06603.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 945

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-GQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIR 456
           + +    H  +A++ +  SE     Y D  K   +     +P R  A T LY VT  ++R
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASPARRSAQTALYHVTQGLLR 781

Query: 457 QLAILLQAFVPKLANKIF 474
            LA  L +F  + A ++F
Sbjct: 782 VLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|332176268|gb|AEE11958.1| Valyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 887

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLG 308
           F+P  + V G DIL F    W A ++ A           KV+  G +   KG K+SKSLG
Sbjct: 492 FYPTSVLVTGPDILFF----WVARMIMAGYHFMGDRPFDKVYLTGIVRDDKGRKMSKSLG 547

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN----LVSR 364
           N  DPI+++++ G D +R  L+   + G D  YD+  +++  N    N I N    L ++
Sbjct: 548 NSPDPIDLMDKYGADGVRLGLMMATSAGNDLLYDESLVEQGRN--FCNKIWNSYRFLKTQ 605

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           SVS      D + P   +   + E   S+ +  + E+ +      I  A+  +  LV + 
Sbjct: 606 SVS------DEVKPDAASLI-AMEWFESLLASTMSELDDLFDKYRISDAVTLLYKLVRDD 658

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               Y +A KP          +  V   T+    Q+ ILL  F+P +  +++
Sbjct: 659 FSGLYLEAIKP----AYGTSMSRKVYERTIHYFEQIFILLHPFMPFITEELW 706


>gi|182683235|ref|YP_001834982.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691187|sp|B2ISI0|SYL_STRPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|182628569|gb|ACB89517.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|168485977|ref|ZP_02710485.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570909|gb|EDT91437.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|324990383|gb|EGC22321.1| leucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 858

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  QDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 227

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 228 LLNDLEELDWPESIKDMQR 246



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 49/191 (25%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLA 355
           K+SKSL NV++P +V+E+ G D LR +      L   IA  ++G    +G +K       
Sbjct: 635 KMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGL---EGSRK------- 684

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                         L   D ++ +    TE+  ++  V    ++ + E ++    + A+A
Sbjct: 685 -------------FLDRVDRLLNSKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIA 731

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  V+  ++                     LY  VE  +    LL  F P LA +++ 
Sbjct: 732 QLMIFVNAANK------------------EEKLY--VEYAKGFIQLLAPFAPHLAEELWQ 771

Query: 476 ILFVADENRCF 486
            +    E+  +
Sbjct: 772 AVAQTGESISY 782


>gi|154149192|ref|YP_001406061.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|189082989|sp|A7I0M0|SYL_CAMHC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|153805201|gb|ABS52208.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 813

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 18/182 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI +   YP+ + H+GH     I D ++R++R+ G +VL   G D  G      A+N
Sbjct: 30  QKKYILSMFPYPSGRIHMGHVRNYTIGDAISRYYRMQGYNVLQPIGFDSFGM----PAEN 85

Query: 65  AGVTTKVF--------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
           A +  K+         +D  ++    +      S +  + T++  +    +  + K+ +K
Sbjct: 86  AAIKHKIHPKKWTYDNIDYMTKELFRLG--FSFSKNRILATSDPIYTKFEQEFFIKMFEK 143

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G IY+      +  +D+    +++V    DG+ +   +  VQ  E  GY+ ++++Y D+L
Sbjct: 144 GLIYRKNAVVNWCEQDQTVLANEQV---EDGKCWRCGNEVVQ-KEMPGYYLKITSYADEL 199

Query: 177 LS 178
           LS
Sbjct: 200 LS 201



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GNV+DP E+IE+ G D  R F++
Sbjct: 570 LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFIL 610


>gi|149924630|ref|ZP_01912984.1| Valyl-tRNA synthetase, class Ia [Plesiocystis pacifica SIR-1]
 gi|149814515|gb|EDM74102.1| Valyl-tRNA synthetase, class Ia [Plesiocystis pacifica SIR-1]
          Length = 922

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 33/196 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F ++    +K L+  E     I P  R  +   ++++ ++D  +SR+ + WG +IP   
Sbjct: 366 WFVKVGPLAEKALAAVEQGDTVIYPQHRTADYYRWMEN-IRDWCISRQLW-WGHRIPAWH 423

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                      +DP                ++  W  +    LTT G+    D    +F+
Sbjct: 424 CESCGAITVAREDPSACSECGGADIHQDEDVLDTWFSSGLWPLTTLGW-PAEDNELPRFY 482

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKGE-KISKSLGNVIDPI 314
              L   G DIL F       F L     +P K +F H  +L + + K+SK+ GNV+DP+
Sbjct: 483 STSLMETGWDILFFWVARMMMFGLHFTGEVPFKTIFLHSMVLGEDKRKMSKTKGNVVDPV 542

Query: 315 EVIEEVGVDALRYFLV 330
            +I+  G DALR++L 
Sbjct: 543 SLIDTYGTDALRFYLC 558



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 8  YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
          + +  +  PN   + H+GHA    I D L R+HR+ G   L+  GTD           +A
Sbjct: 39 HFTVVLPPPNVTGRLHMGHALTATIEDTLVRWHRMRGHRALWLPGTD-----------HA 87

Query: 66 GVTTKVFVDQN 76
          G+ T+V V++ 
Sbjct: 88 GIATQVMVERQ 98


>gi|145632299|ref|ZP_01788034.1| leucyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229844024|ref|ZP_04464165.1| leucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|144987206|gb|EDJ93736.1| leucyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229813018|gb|EEP48706.1| leucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 861

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDALPQW 212


>gi|283856570|ref|YP_163613.2| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|292495062|sp|Q5NLA8|SYV_ZYMMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|283775579|gb|AAV90502.2| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 884

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 25/274 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +      T G+ D    +  ++ P D+ + G DIL F    W 
Sbjct: 445 GVNLRRDPD-VLDTWFSSALWPFATLGWPDTDPKALGRY-PNDVLISGFDILFF----WD 498

Query: 277 AFLLSANL------PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A ++   L      P PK ++ HG +    G K+SKS GN +DP+ +I++ G DALR+ L
Sbjct: 499 ARMIMQGLHFMKDVPFPK-LYLHGLVRAADGSKMSKSKGNTVDPLGLIDKYGADALRFTL 557

Query: 330 VREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
               + G+D   D    +KRV    + A  + N V  + +          P P A   ++
Sbjct: 558 CAMESQGRDIKLD----EKRVEGYRNFATKLWNAVRFAQNNNCAVNTSKQP-PEATLTTN 612

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR 443
             I++  ++V + + +++++         +   V     D Y +  KP     +  N   
Sbjct: 613 RWIIAETAKVARALDQHIEDMRYDELANSLYHFVWNDFCDWYLELIKPILTSTEDQNQGE 672

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               L V   VI Q+ I+L   +P +  +++  L
Sbjct: 673 LQETLAVLGWVIDQILIMLHPIMPFITEELWHAL 706



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          HIGHA +  + D+L R  RL G D L+  GTD           +AG+ T++ V++N
Sbjct: 50 HIGHALDDTLQDILVRHARLKGKDALWVVGTD-----------HAGIATQMVVERN 94


>gi|207344893|gb|EDZ71882.1| YGR264Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 359

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 1/133 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A   
Sbjct: 198 ILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEE 257

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +    
Sbjct: 258 GVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMK 317

Query: 126 GWYSLRDEAYYND 138
             Y     +Y  D
Sbjct: 318 QLYCPVHNSYLAD 330


>gi|206900296|ref|YP_002251273.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739399|gb|ACI18457.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 824

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 8/178 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+AR++ + G +VL   G D  GQ    AA
Sbjct: 44  DKPKYYTLVMFPYPSGDLHMGHMRNYTIGDVVARYYTMKGYNVLNPMGWDAFGQPAENAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  +N    ++    + + Y  D  +      ++   + ++ K+ ++G  Y
Sbjct: 104 IKHKVHPKEWTYKNIARMKEQLFKMGVVYDWDREVTACAPDYYKWTQWIFLKLYERGLAY 163

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K   + W         N++ +    DG+ +  + +PV+  E E +FF+++ Y + LL
Sbjct: 164 RKKAPANWCPTCKTVLANEEVI----DGKCWRCK-SPVERREFEQWFFKITEYAEDLL 216



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 36/236 (15%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGE 301
            KA++W P D +  G +    H +Y        + A       P  K++F+ G +   G+
Sbjct: 533 EKAEYWMPVDQYTGGIEHAVLHLLYSRFITKVLYDAGYSPVREPF-KRLFTQGMVYKDGQ 591

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            +SKSLGN++    ++E  G D  R F++       D  +  +G++         G    
Sbjct: 592 IMSKSLGNIVSVDYMVENYGADTARLFILFVAPPEVDIEWSDEGVE---------GANRF 642

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   ++L D +     P    E ++ I     + ++++ E+++N   + A+A ++ L 
Sbjct: 643 LNRFWRLVLDDAEV---EPKVDEEQEKLIRRKLHKTIKKVTEDIENFKFNTAIAAIMELT 699

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   FD        K N  R         E I+   +LL  FVP +  +++  L
Sbjct: 700 NLL---FD-------HKRNFGRTPAF----EEAIKTSILLLSPFVPHITEELWSEL 741


>gi|220915135|ref|YP_002490439.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219952989|gb|ACL63373.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 946

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 25/222 (11%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P DL++ G D  R  FH+    +  L    P  + V +HGFIL   G+ +SKS GN I+P
Sbjct: 589 PVDLYLEGSDQHRGWFHSSLLTSMALRGAAPY-RAVLTHGFILDQHGKAMSKSAGNGIEP 647

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+I++ G D LR ++          + D  GL  ++ A LA G    +  ++   L   
Sbjct: 648 SEIIKKYGADILRLWV------SASDYRDDIGLGDQILAGLAEGY-RKIRNTIRYALGAL 700

Query: 374 DGMIPTPGAFTESD-ESI-------LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           DG  P   A  E++ E I       L+     + +  E+ +  L + A  Q  + V    
Sbjct: 701 DGFDPARDAVPEAELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCA-VELSA 759

Query: 426 RYFDAQK----PWELKKTNPDRASTVLY-VTVEVIRQLAILL 462
            YFD  K     W+        A T L+ +  ++IR LA +L
Sbjct: 760 LYFDVIKDRLYTWKADGRQRRSAQTALHAIAQDLIRLLAPIL 801


>gi|153009571|ref|YP_001370786.1| valyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561459|gb|ABS14957.1| valyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 910

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 478 VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 532

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D
Sbjct: 533 MDEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRD 590


>gi|260753496|ref|YP_003226389.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552859|gb|ACV75805.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 884

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 25/274 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +      T G+ D    +  ++ P D+ + G DIL F    W 
Sbjct: 445 GVNLRRDPD-VLDTWFSSALWPFATLGWPDTDPKALGRY-PNDVLISGFDILFF----WD 498

Query: 277 AFLLSANL------PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A ++   L      P PK ++ HG +    G K+SKS GN +DP+ +I++ G DALR+ L
Sbjct: 499 ARMIMQGLHFMKDVPFPK-LYLHGLVRAADGSKMSKSKGNTVDPLGLIDKYGADALRFTL 557

Query: 330 VREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
               + G+D   D    +KRV    + A  + N V  + +          P P A   ++
Sbjct: 558 CAMESQGRDIKLD----EKRVEGYRNFATKLWNAVRFAQNNNCAVNTSKQP-PEATLTTN 612

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR 443
             I++  ++V + + +++++         +   V     D Y +  KP     +  N   
Sbjct: 613 RWIIAETAKVARALDQHIEDMRYDELANSLYHFVWNDFCDWYLELIKPILTSTEDQNQGE 672

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               L V   VI Q+ I+L   +P +  +++  L
Sbjct: 673 LQETLAVLGWVIDQILIMLHPIMPFITEELWHAL 706



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          HIGHA +  + D+L R  RL G D L+  GTD           +AG+ T++ V++N
Sbjct: 50 HIGHALDDTLQDILVRHARLKGKDALWVVGTD-----------HAGIATQMVVERN 94


>gi|229013948|ref|ZP_04171073.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747321|gb|EEL97199.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|258651727|ref|YP_003200883.1| valyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258554952|gb|ACV77894.1| valyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 899

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 23/271 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ +  D  KA F+P  + V G DIL F  +    F L  
Sbjct: 458 DPD-VLDTWFSSGLWPFSTMGWPEQSDTLKA-FYPTSVLVTGYDILFFWVVRMMMFGLYA 515

Query: 281 SANLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +AN     +V  H   LH       G+K+SKS GN +DP++ I+  G DA+R+ L R   
Sbjct: 516 TANEDGEPQVPFHTVALHGLVRDQFGKKMSKSRGNTVDPLKWIDTYGADAVRFTLARGSN 575

Query: 335 CGKDGFYDKDGL-------KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            G D    ++ +        K  NA     +   V   V++I  D   + P      +  
Sbjct: 576 PGADQAIAEEWVAGAGKFCSKLFNATRFALLNGAVVPDVALIEAD---LTPADRWILDRL 632

Query: 388 ESILSVCSRVLQEIR-ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           + +++  + +L + +       L H A  +V     E+ +   A    E  +  PDR  T
Sbjct: 633 DEMVTTTTALLGDFQFAKAAEGLYHFAWDEVCDWYLELAKVQIAAG--ERGEDGPDRLVT 690

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              V   V+  L  LL  FVP + + ++  L
Sbjct: 691 TRQVLGTVLDGLLRLLHPFVPFVTDTLWTSL 721



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 31/165 (18%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           E+   S  +  PN     H+GHA +  + DVL R+HR+ G + L+  G D  G       
Sbjct: 47  ERKPFSIVLPPPNVTGNLHVGHALDHTLMDVLTRWHRMSGDEALWLPGMDHAGIATQTVV 106

Query: 56  --QKIAKAAQNAGVTTKVFV----DQNSRN-------FRDMADVLDISYDDFIRTTEKRH 102
             Q  +K +    +  ++FV    D  + +        + + D +D   + F  T ++  
Sbjct: 107 ERQLASKGSSRQELGRELFVQKVWDWKAESGGAILGQMKRLGDSVDWDRERF--TLDEGL 164

Query: 103 HDTCRILWKKISDKGDIYKG------CYSGWYSLRD-EAYYNDDE 140
            D  + ++K++ + G IY+       C     +L D E  ++DD+
Sbjct: 165 SDAVQTIFKRMFEDGLIYRAERIINWCPGCLTALSDIEVEHSDDD 209


>gi|254525827|ref|ZP_05137879.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537251|gb|EEE39704.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 856

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 11/182 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     AA  
Sbjct: 44  DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIE 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY-K 121
            G++  V+  +N  + R    +L +S  +D    T ++ ++   + L+ ++   G +Y K
Sbjct: 104 RGISPSVWTKKNISHMRSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLVYQK 163

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLLSY 179
                W  + +    N+    +G   +        +  QW      F R++ Y D+LL+ 
Sbjct: 164 ESEVNWDPIDNTVLANEQVDSEGKSWRSGAVVEKKLLKQW------FLRITNYADELLND 217

Query: 180 YE 181
            E
Sbjct: 218 LE 219



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 79/178 (44%), Gaps = 26/178 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359
           EK+SKS  N IDP  VI++ G D  R F++ +    KD  + D D            G  
Sbjct: 621 EKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDTD----------VEGQF 670

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +SR   + +     +     ++ + ++ ++   +  ++EI  ++ N   + A+++++ 
Sbjct: 671 RFLSRIWKLYIDCAKDINSKSNSYPDKEKRLIKSMNIAIKEISNDILNNQFNTAISELMK 730

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             + +           + + N +       + +E ++  +ILL  F P +A +I+ ++
Sbjct: 731 FYNSLSN--------SINEVNNN-------LKIEALKTFSILLAPFAPHIAEEIWHLI 773


>gi|310792363|gb|EFQ27890.1| leucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 961

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 11/193 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IADVLAR+H + G  V+   G D  G     AA + GV
Sbjct: 89  YVLPMFPYPSGTLHLGHLRVYTIADVLARYHTMQGSRVMLPMGWDAFGLPAENAAIDRGV 148

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               +   N    ++  +V+  + ++D  + T +   +   + L+  + ++G  Y+    
Sbjct: 149 APAAWTKSNIVKMKEQLEVMNGNWNWDRELTTCDPDFYKHTQKLFLMMLERGLAYQAEAE 208

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL------LSY 179
             Y   D     +++V   A+G  + +    V+  + + +FFR+S +++ L      L+ 
Sbjct: 209 VNYDPVDMTVLANEQV--DANGCSWRSGAK-VEKRQLKQWFFRISEFREALLKDLDTLAK 265

Query: 180 YESHPEFILPIER 192
            ES PE +L +++
Sbjct: 266 DESWPERVLAMQK 278


>gi|163747198|ref|ZP_02154553.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379473|gb|EDQ03887.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 977

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 33/237 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSL 307
           K++P  + V G DI+ F    W A ++     +  +     V+ H  +   KG+K+SKSL
Sbjct: 573 KYFPTSVLVTGFDIIFF----WVARMMMMQYAVVDQKPFDTVYVHALVRDEKGKKMSKSL 628

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR--- 364
           GNV+DP+E+I++ G DA+R+ L    A G+D          +++     G  N  ++   
Sbjct: 629 GNVLDPLELIDDYGADAVRFTLTSMAAMGRD---------LKLSTQRIAGYRNFGTKLWN 679

Query: 365 -----SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
                 ++ +       +P P A    ++ I+   +R+ +E+   + N   + A   + +
Sbjct: 680 AHRFAEMNNVFDSMPAAMPQPQATL--NKWIVGETARIREEVDAALGNFRFNDAANALYA 737

Query: 420 LV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            V     D Y +  KP  L+   P+ A T   +   V+ Q  +LL   +P +  +++
Sbjct: 738 FVWGKVCDWYVELSKPL-LQDDAPEAAETRATMAW-VLEQCLVLLHPIMPFITEELW 792



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 13/70 (18%)

Query: 8  YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
          + S  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D           +A
Sbjct: 37 HFSVMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMQGFDTLWQPGQD-----------HA 85

Query: 66 GVTTKVFVDQ 75
          G+ T++ V++
Sbjct: 86 GIATQMVVER 95


>gi|114327130|ref|YP_744287.1| isoleucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315304|gb|ABI61364.1| isoleucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 981

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  F +    A     + P  + V +HGF+L  +G K+SKSLGNV  
Sbjct: 602 WPADLYLEGSDQHRGWFQSSLLEAVGTRGSAPF-EAVLTHGFVLDEQGRKMSKSLGNVTA 660

Query: 313 PIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           P EVI++ G D LR +++      ++  GK+    +  L +R+   L   +G+L
Sbjct: 661 PQEVIDQYGADILRLWVMSSDTRDDLRIGKEILKQQGELYRRLRNTLRWILGSL 714



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAK 60
           E   +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG     KI +
Sbjct: 94  EPFVLHDGPPYANGHLHIGHALNKILKDVINRARQMAGYDAAYVPGWDCHGLPIEWKIEE 153

Query: 61  AAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIR 96
             + +G    +V V Q     RD A   LDI   +F R
Sbjct: 154 EYRKSGRNKDEVPVLQFRAECRDYARKWLDIQSAEFRR 191


>gi|86156442|ref|YP_463227.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85772953|gb|ABC79790.1| Isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 946

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 25/222 (11%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P DL++ G D  R  FH+    +  L    P  + V +HGFIL   G+ +SKS GN I+P
Sbjct: 589 PVDLYLEGSDQHRGWFHSSLLTSMALRGAAPY-RAVLTHGFILDQHGKAMSKSAGNGIEP 647

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+I++ G D LR ++          + D  GL  ++ A LA G    +  ++   L   
Sbjct: 648 SEIIKKYGADILRLWV------SASDYRDDIGLGDQILAGLAEGY-RKIRNTIRYALGAL 700

Query: 374 DGMIPTPGAFTESD-ESI-------LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           DG  P   A  E++ E I       L+     + +  E+ +  L + A  Q  + V    
Sbjct: 701 DGFDPARDAVPEAELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCA-VELSA 759

Query: 426 RYFDAQK----PWELKKTNPDRASTVLY-VTVEVIRQLAILL 462
            YFD  K     W+        A T L+ +  ++IR LA +L
Sbjct: 760 LYFDVIKDRLYTWKADGRQRRSAQTALHAIAQDLIRLLAPIL 801


>gi|319406299|emb|CBI79936.1| Leucyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 892

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 8/182 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EREK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 50  EREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
             + V  KV+  +N    R     L  S D   +F  T +  ++   ++L+     KG I
Sbjct: 110 MQSKVHPKVWTYENITVMRKQLKKLGFSLDWSREFA-TCDVEYYHRQQMLFLDFYQKGLI 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V    DG+ + +    V+  E   +FF++S + + LL+ 
Sbjct: 169 SRQVAKVNWDPVDQTVLANEQVI---DGRGWRS-GALVEQRELTQWFFKISDFSNDLLAG 224

Query: 180 YE 181
            E
Sbjct: 225 LE 226



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 24/202 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
           + I YV +D     L T G + +      K W  PAD+ ++ KD  R       A+ L+ 
Sbjct: 586 KMIGYVSVDEPFKGLFTQGMVVHETYQDEKGWVSPADVEIVEKDGKRC------AYKLTD 639

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
              +         ++   EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + 
Sbjct: 640 QSEV---------MIGSIEKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPERDVIWT 690

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G++          +  LV+ S   +LK         GA  E  ++      R L  + 
Sbjct: 691 ESGIEGAYR--FVQRVWRLVALSAP-VLKGVKSCAGQQGAALELSKA----AHRTLCAVE 743

Query: 403 ENMQNQLIHRALAQVISLVSEV 424
           ++++    +RA+A++  L++ +
Sbjct: 744 DDLEKLAFNRAVARLYELLNVI 765


>gi|316934221|ref|YP_004109203.1| valyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601935|gb|ADU44470.1| valyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 957

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +    +++P D+ V G DI+ F    W A ++   L
Sbjct: 495 VLDTWFSSALWPFSTLGW---PDETPELDRYYPTDVLVTGFDIIFF----WVARMMMMGL 547

Query: 285 ------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 P P  V+ H  +   KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+
Sbjct: 548 HFMDDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLNLIDQYGADALRFTLAAMAAQGR 606

Query: 338 D 338
           D
Sbjct: 607 D 607



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERQ 96


>gi|258510439|ref|YP_003183873.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477165|gb|ACV57484.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 801

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 44/232 (18%)

Query: 255 FW-PADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +W P D+++ G +    H +Y        +   L+  + P  +++F+ G I   G K+SK
Sbjct: 521 YWLPVDMYIGGVEHAVLHLLYSRFYVKFIYDLGLIDFDEPF-QRLFTQGMITLNGAKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P ++I   GVDALR + +       D  +  +GL+         G+   ++R 
Sbjct: 580 SKGNVVNPDDIIARYGVDALRMYEMFVGPPEDDAEWSTNGLE---------GVARFLARV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +  +  D ++P          S+  +  R +  + E M++  ++ A++  +  V+ + 
Sbjct: 631 YRLYAQQVDKLVP-------ERPSLTKLRHRFVATLTERMESFRLNTAVSAFMEYVNNLQ 683

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                    +  K   DRA+         +  LAI +  F P L  +++++L
Sbjct: 684 ---------QEAKDGLDRAT---------LETLAIAIAPFTPHLGEELWEML 717



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 7/178 (3%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+    H+GH     I+DV +R+ +L G ++L   G D  G      A
Sbjct: 30  KPKYYCLDMFPYPSGSGLHVGHWRGYTISDVWSRYKKLHGYEILHPMGWDAFGLPAENYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  ++  +QN  NF+   + +   Y  D  + TT+   +   +  + K+ ++G  Y
Sbjct: 90  IQNGIHPRIATEQNIANFKRQLEEIGAMYDWDREVNTTDPSFYKWTQYFFVKMFERGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +      +    +    ++EV  G           PV   E E +  +++ Y D+LL+
Sbjct: 150 RKKMPINWCPSCKTGLANEEVVDGC----CERCGAPVTRREMEQWMLKITDYADRLLN 203


>gi|255659377|ref|ZP_05404786.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848463|gb|EEX68470.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 826

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 8/178 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y      YP+   H+GH     I DV+AR+  ++G +VL   G D  G     AA
Sbjct: 30  DRPKYYALEMFPYPSGNLHMGHVRNYAIGDVMARYKTMEGFNVLHPMGFDSFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N  N       L +SY  D  ++T +  ++   + L++    +G  Y
Sbjct: 90  IKHGVKPADWTYSNIENMEKQQKKLGLSYDWDREVKTCDPSYYKWTQWLFELFYKRGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   S  W         N+  +    DG+ +   H  V   +   +F +++ Y D LL
Sbjct: 150 KKKASVNWCDTCGTVLANEQVI----DGKCWRCDHE-VHKKDLSQWFLKITDYADVLL 202



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 41/245 (16%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           K  +W P D ++ G +    H +Y   F        L+  + P    + + G +L  G K
Sbjct: 524 KVNYWAPVDQYIGGIEHAILHLLYSRFFTKVLHDAGLVDFDEPF-TNLLTQGMVLKDGSK 582

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P E+I + G D  R F++      +D  +   G++         G    +
Sbjct: 583 MSKSKGNVVSPEEIIAKYGADTARLFILFAAPVDRDLEWSDQGVE---------GSYRFL 633

Query: 363 SRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQNQ-LIHRALA 415
           +R V  IL  ++  I +  A       T+ ++ +  +    ++++ E+++++ + + A++
Sbjct: 634 NR-VWRILGHFEEAIKSGKADYDTSKLTKEEKDLRRILHVTIRKVTEDVRDRFMFNTAVS 692

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ LV+ +  + D     +LK            +  EV   L  LL  F P +  +++ 
Sbjct: 693 SIMELVNALYAFQDK----DLKAG----------LAREVAENLIKLLAPFAPHITEELWS 738

Query: 476 ILFVA 480
            LF  
Sbjct: 739 RLFAG 743


>gi|218463361|ref|ZP_03503452.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 514

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 137/365 (37%), Gaps = 71/365 (19%)

Query: 16  PNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN + H+GH   + ++ADV  R+HR+ G      TG DEHG      A+  G        
Sbjct: 2   PNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKARKLGRPVDDVAH 61

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
            +          +DI  D F+RT+ + H D    ++ ++           SG+  LRD  
Sbjct: 62  MHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLR---------ASGYVELRD-- 110

Query: 135 YYNDDEVYKGADGQY------------------------------YNAQHNPVQWMEEEG 164
               +++Y G   ++                              +N   NP+     +G
Sbjct: 111 ---GEQLYCGTCEEFAADSLAVGECPACNAPTDSNLCEDCGSALQHNLLRNPIHTTSGQG 167

Query: 165 YFFR--------LSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              R        L  +   L    E+   PE I    +R E + +++S L  L +SR  F
Sbjct: 168 LILRPIRQVHFELEKFAPGLDHAIEASGWPESI----KRKE-LDWLRSKLMALPMSRH-F 221

Query: 215 DWGIKIPDDPQYI----MYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVI---GK 265
           D G+ + + P  +    +  W + L  Y T    L   +G+        A   ++   G+
Sbjct: 222 DRGVTL-NSPVEVAGQTLMTWFEGLWCYETGIERLCKQNGADLDDTMRNASTRLVFFMGQ 280

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           D   ++ I   A L S    +P       F   +G K S S  + +   EV  ++  + L
Sbjct: 281 DNRFYYTIGVTASLFSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWADEVAADIDTNVL 340

Query: 326 RYFLV 330
           RY+L 
Sbjct: 341 RYYLA 345


>gi|73662887|ref|YP_301668.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|84029568|sp|Q49WX5|SYI_STAS1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72495402|dbj|BAE18723.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 916

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 35/286 (12%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + + I+  E  N V    ++   ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGDIIMTSETVNHVADLFEANGSNIWFEREAKDLLPEGFTHPGSPNGEFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PADL++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLEARPELS----YPADLYLEGSDQYRGWFNSSITTSVATRGQSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + SHGF++  +G+K+SKSLGNVI P +++++ G D  R + V  +    D     +
Sbjct: 579 Y-KMLLSHGFVMDGEGKKMSKSLGNVIVPDQIVKQKGADIARLW-VSSVDYLADVRISDE 636

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK+  ++D+   I N    ++  +L +     P   A  E D  +L V   +L  +RE 
Sbjct: 637 ILKQ--SSDVYRKIRN----TLRFMLGNVSDYNPATDAIAEKD--LLEVDKYLLNRLREF 688

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             N L H      + +  EV  + +     EL     D    +LY+
Sbjct: 689 TANTLDHYDNYDYLDIYQEVQNFINV----ELSNFYLDYGKDILYI 730



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I +A    GV  K    
Sbjct: 58  YANGNLHMGHALNKILKDIITRYKSMLGYYAPYVPGWDTHGLPIEQALTKKGVKRKELSI 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-LWKKISDKG 117
                         +D   ++F+ +    D + + +I  T K  ++  +I L+ +++DKG
Sbjct: 118 AEFRKKCEAFALEQIDNQKKDFKRLGVKGDFN-NPYI--TLKPEYEAAQIRLFGEMADKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 LIYKGKKPVYWSPSSESSLAEAEI 198


>gi|152977105|ref|YP_001376622.1| leucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082981|sp|A7GU19|SYL_BACCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152025857|gb|ABS23627.1| leucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 9/180 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEKNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL 
Sbjct: 149 YVDEIPVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLE 203



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  KAK W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKAKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|332077556|gb|EGI88017.1| tRNA synthetases class I family protein [Streptococcus pneumoniae
           GA41301]
          Length = 383

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|325127582|gb|EGC50505.1| isoleucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 929

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE    +       H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYAVVLARQLQERLAGDYYSRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 HARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|294101891|ref|YP_003553749.1| valyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616871|gb|ADE57025.1| valyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 888

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 49/319 (15%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP +              ++  W  + 
Sbjct: 402 IRDWCISRQLW-WGHRIPAWTCAECGHITVSEEDPTHCEKCGSARIQQDEDVLDTWFSSA 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKV 290
               +T G+ +  +     F+P  L V   DI+ F    W A ++   L        K+V
Sbjct: 461 LWPFSTLGWPEKTE-ELNYFYPTSLLVTAFDIIFF----WVARMIMMGLEFMENEPFKEV 515

Query: 291 FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK- 348
           + H  I   +G+K+SKS GNVIDP+ +I++ G DALR  L      G+D     + ++  
Sbjct: 516 YIHALIRDEEGQKMSKSKGNVIDPLTMIDKYGADALRLTLAALTVQGRDILLSTNKIETY 575

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQ 406
           R+     N + N  SR   + L++     P P  G     D+ IL+   +V ++I   + 
Sbjct: 576 RL---FMNKLWN-ASRFALINLEENCSEKPLPDKGELRLHDQWILTRTQQVTEQITRLLD 631

Query: 407 NQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              I  A   +   +     D Y +  KP         R      +   V + +  L+  
Sbjct: 632 GYFIGEAARMLYDFIWGDLCDWYLEMSKPALKGDEGESRVKNTQAIVEYVFKTVLKLIHP 691

Query: 465 FVPKLANKIFDILFVADEN 483
           F+P    +++     +D++
Sbjct: 692 FIPFATEELWHTFGFSDDS 710



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 28/192 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN     H+GHA+     D++ R+ R++G +VL+  GTD  G        +++A
Sbjct: 43  SIVIPPPNVTGSLHMGHAFNNTFQDIVCRYKRMNGFNVLWLPGTDHAGIATQNVVERELA 102

Query: 60  K-AAQNAGVTTKVFVDQ--------NSR---NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           K       +  + FV++         SR     + + +  D   + F  T ++      R
Sbjct: 103 KDGISRHDLGREEFVNKVWEWKEEYGSRIIEQMKKLGNSCDWERERF--TLDEGLSQAVR 160

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166
            ++ ++  KG IYKG Y   +  R     +D EV ++   G  Y  ++    ++E EGY 
Sbjct: 161 TVFVRLYKKGLIYKGRYIINWCPRCHTALSDIEVEHEDLKGCLYYVKY---PFVEGEGYL 217

Query: 167 FRLSAYQDKLLS 178
              +   + +L 
Sbjct: 218 LVATTRPETILG 229


>gi|256848733|ref|ZP_05554167.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256714272|gb|EEU29259.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 933

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 529 ILDVWFDSGSSW---SGVMEKRDGL---HYPADLYLEGSDQYRGWFNSSLITSVAVTGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 583 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 629



 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKQGVDRKTMDR 117

Query: 75  QNSRNF----------RDMADVLDIS----YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              R            + MAD   +     +D+   T +         ++ ++  KG IY
Sbjct: 118 AKYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + EV
Sbjct: 178 KGLKPVYWSWSSESTLAEAEV 198


>gi|289168700|ref|YP_003446969.1| leucyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908267|emb|CBJ23109.1| leucyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 833

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 NDLDELDWPESIKDMQR 221


>gi|197120433|ref|YP_002132384.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170282|gb|ACG71255.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 946

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 25/222 (11%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P DL++ G D  R  FH+    +  L    P  + V +HGFIL   G+ +SKS GN I+P
Sbjct: 589 PVDLYLEGSDQHRGWFHSSLLTSMALRGAAPY-RAVLTHGFILDQHGKAMSKSAGNGIEP 647

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+I++ G D LR ++          + D  GL  ++ A LA G    +  ++   L   
Sbjct: 648 SEIIKKYGADILRLWV------SASDYRDDIGLGDQILAGLAEGY-RKIRNTIRYALGAL 700

Query: 374 DGMIPTPGAFTESD-ESI-------LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           DG  P   A  E++ E I       L+     + +  E+ +  L + A  Q  + V    
Sbjct: 701 DGFDPARDAVPEAELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCA-VELSA 759

Query: 426 RYFDAQK----PWELKKTNPDRASTVLY-VTVEVIRQLAILL 462
            YFD  K     W+        A T L+ +  ++IR LA +L
Sbjct: 760 LYFDVIKDRLYTWKADGRQRRSAQTALHAIAQDLIRLLAPIL 801


>gi|326922099|ref|XP_003207289.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 904

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +AR+ ++ G+ VL   G D  G     A
Sbjct: 79  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDAVARYQKMRGMQVLNPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R+  D L +S+  +  + T    ++   + L+ K+ + G +
Sbjct: 139 AIEHGLHPASWTQSNIQHMREQFDALGLSFTWEREVTTCLPEYYKWTQYLFLKLFESGIV 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 33/196 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP E+++E G+D +R +++      +D  +D          D   G+  
Sbjct: 639 EKMSKSKHNGIDPEELMKEYGIDTIRLYILFAAPPEQDILWD-------TKTDAMPGVQR 691

Query: 361 LVSRSVSMILKDYDG----MIPTPGAFTESDES----ILSVCSRVLQEIRENM-QNQLIH 411
             +R  +++ K  +      IP P   +  +++    I    + V+ E+ E   ++ L +
Sbjct: 692 WQTRLWTLVTKLIEARTSETIPNPEVLSNIEKAEAKRIWEQKNLVISEVTEYFTKDHLFN 751

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKL 469
            A+++++SL + +      Q  W L          VL+     + +  L I++    P +
Sbjct: 752 AAISRLMSLSNVLH-----QASWPL----------VLHSAEYEDALATLCIMVAPMAPHI 796

Query: 470 ANKIFDILFVADENRC 485
           A++++  L   +   C
Sbjct: 797 ASEMWKGLAHIENKLC 812


>gi|291165693|gb|EFE27741.1| isoleucine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 1035

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 112/232 (48%), Gaps = 18/232 (7%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
            +PAD    G D  R  F+++   +  ++   P  K V  +  IL K G+K+SKS GN +
Sbjct: 543 LFPADFICEGIDQTRGWFYSLLAISTFMTGKTPY-KNVLVNDLILDKDGKKMSKSKGNTV 601

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP  + ++ G D LR++L+          +D +GLK+ V +     I N+ +  V  +  
Sbjct: 602 DPFALFDQYGADVLRWYLLYVSPPWVPTRFDVEGLKE-VQSKFFGTIKNVYNFFV--LYA 658

Query: 372 DYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VD 425
           + D + P      P    E D  ILS  +R+ QE+ +++    + + +  +   V+E + 
Sbjct: 659 NTDEINPREFYVEPKDRAELDCWILSKFNRLKQEVEQDLAVFEVTKVVRNIQDFVNEDLS 718

Query: 426 RYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++     ++ WE   T   ++  V   T E++ +L+ ++  F P L+ +++
Sbjct: 719 NWYIRRSRRRFWETGLTEDKKS--VYNTTYEILVELSQMIAPFAPYLSEEMY 768


>gi|229062425|ref|ZP_04199741.1| Leucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716896|gb|EEL68583.1| Leucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 802

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|227877331|ref|ZP_03995404.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256842893|ref|ZP_05548381.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381727|ref|ZP_06627708.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|312977589|ref|ZP_07789336.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227863187|gb|EEJ70633.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614313|gb|EEU19514.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290921774|gb|EFD98795.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|310895328|gb|EFQ44395.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 933

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 529 ILDVWFDSGSSW---SGVMEKRDGL---HYPADLYLEGSDQYRGWFNSSLITSVAVTGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 583 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 629



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKQGVDRKTMDR 117

Query: 75  QNSRNF----------RDMADVLDIS----YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              R            + MAD   +     +D+   T +         ++ ++  KG IY
Sbjct: 118 AKYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + EV
Sbjct: 178 KGLKPVYWSWSSESTLAEAEV 198


>gi|308233828|ref|ZP_07664565.1| valyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943802|ref|ZP_08241267.1| valine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491771|gb|EGF23545.1| valine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 895

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 54/322 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDAL 235
           LKD  +SR+ + WG +IP                               + ++  W  + 
Sbjct: 399 LKDWCISRQLW-WGHRIPVFTCADCGWEDACLEDVAVCPHCSSSHVSQDENVLDTWFSSQ 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKV 290
                T G+  + D  KA   P  + V  +DI+      W A ++ ++L     +P K V
Sbjct: 458 LWTFATQGWPFSSDELKAHH-PTKVLVTARDIIAL----WVARMIMSSLYFTHEIPFKDV 512

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD------K 343
           + +  IL K G ++SKS GN ++P+++I++ G DA+RY L+  I   +D  +D       
Sbjct: 513 YIYATILAKDGSRMSKSKGNGVNPMDLIDKYGADAMRYNLLTLITTNQDVKFDAVIDKKT 572

Query: 344 DGLKKRVNADLANGIGNLV---SRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQ 399
             LK+    D A      +   SR V M L+DY   +P  P A T  D  +LS  + V++
Sbjct: 573 KQLKESPRTDQARSFITKIWNASRFVHMNLQDY---VPGKPCAQTMEDAWMLSRLAAVVK 629

Query: 400 EIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +  E ++          + S   +EV  ++       L     D    V    V V+   
Sbjct: 630 KTTEQLETYAFGDYARDIQSFFWNEVCDWYIELCKGRLLNGTADEKLQVQRNLVFVLDTA 689

Query: 459 AILLQAFVPKLANKIFDILFVA 480
             LL   +P +  +I+D+L V+
Sbjct: 690 LRLLHPVIPFVTEEIWDMLPVS 711


>gi|225024476|ref|ZP_03713668.1| hypothetical protein EIKCOROL_01351 [Eikenella corrodens ATCC
           23834]
 gi|224942751|gb|EEG23960.1| hypothetical protein EIKCOROL_01351 [Eikenella corrodens ATCC
           23834]
          Length = 876

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV +RF ++ G +VL   G D  G     AA 
Sbjct: 32  KPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKMQGFNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N  V    +  +N    R     L  + D    I T    ++   ++L+ K+ +KG +YK
Sbjct: 92  NHQVAPSKWTYENIAYMRKQLQSLGFALDWEREIATCRPEYYRWEQLLFTKLFEKGIVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KLGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYFKITDYAEQLLA 204



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L  T Y ++ DG K  F PA++ V   D  R         L+SA L    +      ++ 
Sbjct: 583 LAATYYRESADGKKTWFNPAEVRVQTDDKGR---------LVSAVL----EADGQPVVIG 629

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             EK+SKS  N +DP E+IE  G D  R F++
Sbjct: 630 GVEKMSKSKNNGVDPQELIEAYGADTARLFMM 661


>gi|81429045|ref|YP_396045.1| leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769672|sp|Q38VP5|SYL_LACSS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78610687|emb|CAI55738.1| Leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 807

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 11/181 (6%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++  Y      YP+ Q  H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 28  KDKKNFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+   + L  SY  D  + TT+   +   + +++K+ +KG 
Sbjct: 88  YALDTGNNPADFTQKNINTFKRQINSLGFSYDWDREVNTTDPDFYKWTQWIFEKMYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y+   +  +S        ++EV  G  +   Y     P+ QWM       +++AY D+L
Sbjct: 148 AYEAEVAVNWSPDLGTVVANEEVIDGKTERGGYPVYRKPMRQWM------LKITAYADRL 201

Query: 177 L 177
           +
Sbjct: 202 I 202



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 40/173 (23%)

Query: 244 YLD--NPDG----SKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFSH 293
           Y+D  NPD      K K W P D+++ G +    H +Y   W  FL    +   K+ F H
Sbjct: 502 YIDPKNPDKLADFDKLKDWLPVDMYIGGAEHAVLHLLYVRFWHKFLYDIGVVPTKEPFQH 561

Query: 294 ----GFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG--- 339
               G IL    EK+SKS GNV++P +V++  G D LR +      L   I+  + G   
Sbjct: 562 LYNQGMILGDNHEKMSKSKGNVVNPDDVVDRFGADTLRLYEMFMGPLDASISWSEKGLAG 621

Query: 340 ---FYDK-------------DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              F D+             D L  ++ AD  + +  + + +V  + +D++ M
Sbjct: 622 ARKFLDRVWRLYTEEDTDENDQLSSKIVADNNDQLKKVYNETVKKVTEDFESM 674


>gi|86610302|ref|YP_479064.1| leucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123737942|sp|Q2JHX0|SYL_SYNJB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86558844|gb|ABD03801.1| leucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 882

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 5/178 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA + 
Sbjct: 35  KFYALSMFPYPSGNLHMGHVRNYTITDVIARHKRMQGYAVLHPMGWDAFGLPAENAAIDR 94

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+    +  QN    R+    L +SYD    I T    ++   + L+ +    G  Y+  
Sbjct: 95  GIPPAKWTYQNIAQMREQLQRLGLSYDWEREITTCAPDYYKWTQWLFLQFFKAGLAYQKE 154

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               +   D+    +++V   A+G+ + +     + M ++ +FF+++AY D+LL+  E
Sbjct: 155 APVNWDPVDQTVLANEQV--DAEGRSWRSGALVEKRMLKQ-WFFKITAYADQLLADLE 209


>gi|327439439|dbj|BAK15804.1| valyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 880

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 16/156 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEKISKS 306
           +++P +  V G DI+ F    W + ++      +   P  K V  HG +   +G K+SKS
Sbjct: 474 RYYPTNTLVTGYDIIFF----WVSRMIFQGKEFTGERPF-KDVLIHGLVRDAEGRKMSKS 528

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP++VI++ G D+LRYFL    + G+D  Y  + ++   N    N I N  SR  
Sbjct: 529 LGNGVDPMDVIDQYGADSLRYFLATGSSPGQDLRYSTEKVESTWN--FVNKIWN-ASRFA 585

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401
            M ++      I   G  + +D+ ILS  +  +  +
Sbjct: 586 LMNMEGLTFEQIDLTGNLSTADKWILSRLNETIDRV 621



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D+L R  R+ G D L+  G D  G     K+ +  +
Sbjct: 41  SIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAGIATQAKVEEKLR 100

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+T                 + +       +  +   LD S + F  T ++   D  +
Sbjct: 101 GEGITRYDLGREKFLEKTWEWKEEYASHIRAQWSKLGLGLDYSKERF--TLDEGLSDAVK 158

Query: 108 ILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++ K+ +KG IY+G     W      A  + + ++K  +G +Y+ ++
Sbjct: 159 EVFVKLYEKGYIYRGERIINWDPAAKTALSDIEVIHKEVEGAFYHMEY 206


>gi|18158855|pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl-
           Adenylate Analogue
 gi|18158860|pdb|1JZS|A Chain A, Isoleucyl-Trna Synthetase Complexed With Mupirocin
 gi|157831464|pdb|1ILE|A Chain A, Isoleucyl-Trna Synthetase
          Length = 821

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+      +  Y    +    + +PAD    G D  R  F++++    +L  +
Sbjct: 513 YVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGS 572

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +   K V  HG IL  KG+K+SKS GNV+DP ++I + G DALR+++        D  + 
Sbjct: 573 IAF-KNVICHGLILDEKGQKMSKSKGNVVDPWDIIRKFGADALRWYIYVSAPPEADRRFG 631

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
            + +++ V  D    + N+ S  V+    D   +   P P    E D  +L+    ++Q 
Sbjct: 632 PNLVRETVR-DYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQR 690

Query: 401 IRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           + E ++        RAL   +  V ++ +++  +      K          Y T+ E + 
Sbjct: 691 VTEALEAYDPTTSARALRDFV--VEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALV 748

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +A L   F P LA  ++  L
Sbjct: 749 LVATLAAPFTPFLAEVLWQNL 769


>gi|262045859|ref|ZP_06018823.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573818|gb|EEX30374.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 933

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 529 ILDVWFDSGSSW---SGVMEKRDGL---HYPADLYLEGSDQYRGWFNSSLITSVAVTGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 583 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 629



 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKQGVDRKTMDR 117

Query: 75  QNSRNF----------RDMADVLDIS----YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              R            + MAD   +     +D+   T +         ++ ++  KG IY
Sbjct: 118 AKYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + EV
Sbjct: 178 KGLKPVYWSWSSESTLAEAEV 198


>gi|167564099|ref|ZP_02357015.1| leucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571241|ref|ZP_02364115.1| leucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 864

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  ERKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYRWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|157364834|ref|YP_001471601.1| valyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166987328|sp|A8F8Q3|SYV_THELT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157315438|gb|ABV34537.1| valyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 861

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 24/276 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G K  +  + ++  W  +     +T G+ +  +  + K++P  + V G DI+ F    W 
Sbjct: 435 GSKSIEQDEDVLDTWFSSALWPFSTLGWPEKTEDLE-KYYPTSVLVTGFDIIFF----WV 489

Query: 277 AFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++       +K     V+ H  I  K G K+SKSLGN IDPI++ E+ G D +R+ L 
Sbjct: 490 ARMIIMGYQFMQKKPFTDVYIHQLIRDKHGRKMSKSLGNGIDPIDMSEKYGTDPVRFTLA 549

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDES 389
              A G D   D+         D      N +  +   +L + D   P P    + +D  
Sbjct: 550 IFAAQGSDIKLDERYF------DTYRKFANKIWNAARFVLINLDNYKPQPLNELSLADRW 603

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS   +V+  + + ++    + A   +         D Y ++ K       N ++ +  
Sbjct: 604 ILSKLQKVISVVSDAIEKYEFNIAARSLYEFFWNEFCDWYIESSK----LVLNSEKKAIT 659

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             V V+V+     LL  F+P L+ +++  L V  E+
Sbjct: 660 QNVLVKVLDTSLRLLHPFMPFLSEELWQNLPVHGES 695



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
          H+GHA  + + D+L R+ R+ G D L+  G D  G     A QNA
Sbjct: 49 HMGHALNITLQDILVRYKRMRGFDTLWVPGEDHAG----IATQNA 89


>gi|330814064|ref|YP_004358303.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487159|gb|AEA81564.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 884

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 19/117 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSL 307
           +F+   + V G DI+ F    W A ++  +L   KKV      +H      KG+K+SKS 
Sbjct: 479 RFYSTSVLVTGFDIIFF----WVARMMMMSLYFMKKVPFSNVYVHALVRDDKGQKMSKSK 534

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           GNVIDPI +I E G DALR+ L+   + G+D          ++  D  NG  N V++
Sbjct: 535 GNVIDPIVLINEYGADALRFTLIAMSSPGRDV---------KLAKDRVNGYKNFVTK 582



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 8  YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          Y S  I  PN     H+GHA    I D+L RF R  G + L+  GTD  G
Sbjct: 37 YFSIVIPPPNVTGSLHMGHALNNTIQDLLIRFKRNQGYETLWQPGTDHAG 86


>gi|218463291|ref|ZP_03503382.1| isoleucyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 741

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPADL++ G D  R  FH+    +       
Sbjct: 571 ILDVWFDSGSTHTFT--LEDRPDLK----WPADLYLEGSDQHRGWFHSSLLESAATRGRA 624

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GNV  P EV+++ G D LR +++
Sbjct: 625 PY-DAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVM 670



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPI 108


>gi|60390712|sp|Q6MSR0|SYL_MYCMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|301320514|gb|ADK69157.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 804

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K YI     YP+ A  H+GH       DV +RF R+ G DVL   G D  G    + A
Sbjct: 29  EKKAYILDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG--- 117
              G   + F  QN  NF+   + +  S  YD  I T +  ++ T + ++K++  KG   
Sbjct: 89  LKTGNDPREFTLQNIENFKIQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLAE 148

Query: 118 --DI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             DI    C      L ++     D +     G+Y   +    QW+       +++ Y D
Sbjct: 149 NRDIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWV------LKITDYAD 202

Query: 175 KLL 177
           KLL
Sbjct: 203 KLL 205



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 12/112 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFL--- 279
           +I Y+  ++  N +  T   D       K+ P DL++ G++    H +Y   W  FL   
Sbjct: 498 FIAYILANSKNNLIDLTS--DEAKKRLEKWLPVDLYIGGQEHAVGHLLYARFWTHFLYDL 555

Query: 280 --LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             L  N P  K++F+ G IL     K+SKS GNVI+P +VI+  G DALR +
Sbjct: 556 GLLPTNEPF-KRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHGADALRLY 606


>gi|268562850|ref|XP_002638684.1| C. briggsae CBR-LRS-2 protein [Caenorhabditis briggsae]
          Length = 821

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI +   YP+ + HIGH     I+D  AR++RL+G  V+   G D  G     AA+N
Sbjct: 25  EKKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYRVIHPIGWDSFGLPAENAARN 84

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
            GV  + +  QN    R       I +D
Sbjct: 85  NGVDPREWTIQNIETMRRQLKATQIQFD 112


>gi|228470058|ref|ZP_04054969.1| valyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308332|gb|EEK17181.1| valyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 887

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLG 308
           F+P  + V G DIL F    W A ++ A           KV+  G +   KG K+SKSLG
Sbjct: 492 FYPTSVLVTGPDILFF----WVARMIMAGYHFMGDRPFDKVYLTGIVRDDKGRKMSKSLG 547

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN----LVSR 364
           N  DPI+++++ G D +R  L+   + G D  YD+  +++  N    N I N    L ++
Sbjct: 548 NSPDPIDLMDKYGADGVRLGLMMATSAGNDLLYDESLVEQGRN--FCNKIWNSYRFLKTQ 605

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           SVS      D + P   +   + E   S+ +  + E+ +      I  A+  +  LV + 
Sbjct: 606 SVS------DEVKPDAASLI-AMEWFESLLASTMSELDDLFDKYRISDAVTLLYKLVRDD 658

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               Y +A KP          +  V   T+    Q+ ILL  F+P +  +++
Sbjct: 659 FSGLYLEAIKP----AYGTSMSRDVYERTIHYFEQIFILLHPFMPFITEELW 706


>gi|315452888|ref|YP_004073158.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131940|emb|CBY82568.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 804

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 20/184 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI +   YP+   H+GH     I D LAR++R  G +VL   G D  G     AA 
Sbjct: 31  KSKKYILSMFPYPSGAIHMGHVRNYAIGDALARYYRQVGYNVLHPMGFDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS--------D 115
             G+  K +  +N    R+    L  S+      ++ R   TC   + KI         +
Sbjct: 91  QYGIHPKQWTYENISKMREEFKALGFSF------SKTREFATCDPNYTKIEQGFFLQMYE 144

Query: 116 KGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG +Y K  +  W   +D     +++V    +G+ +     PV   +   Y+ +++ Y +
Sbjct: 145 KGLVYQKEAWLNWCP-KDHTVLANEQV---VEGKCWRCD-TPVVQKQMPQYYLKITKYAE 199

Query: 175 KLLS 178
           +LL+
Sbjct: 200 ELLA 203



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           + G +L  G K+SKS GNV+ P E++E+ G D  R ++
Sbjct: 562 TQGMVLKNGAKMSKSKGNVVSPQEIVEKYGADIARLYI 599


>gi|307711009|ref|ZP_07647431.1| leucyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307616971|gb|EFN96149.1| leucyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 NDLDELDWPESIKDMQR 221


>gi|306828817|ref|ZP_07462009.1| leucine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428995|gb|EFM32083.1| leucine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|300173528|ref|YP_003772694.1| leucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887907|emb|CBL91875.1| Leucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 803

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D+++RF R +G +VL   G D  G    + A
Sbjct: 30  KPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRFKRANGFNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F  QN  +FR+    L +SYD    I TT+  ++   + +++K+ +KG  Y
Sbjct: 90  MKTGHNPADFTSQNVDHFREQIKSLGLSYDWNREINTTDPTYYKWTQWIFEKLYEKGLAY 149

Query: 121 K 121
           +
Sbjct: 150 E 150



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 513 DLDKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSN 572

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +++   G D LR + +      ++  + ++G+          G  
Sbjct: 573 HEKMSKSKGNVVNPDDIVMAFGADTLRVYEMFMGPLTQNKPWSEEGI---------TGSR 623

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +++ D   +      +   D  +  +  + ++++ E+++N   + A++Q++ 
Sbjct: 624 RWLDRVWRLLIDDEGQVREAVSTYNSGD--LDKIYHQTVKKVTEDLENMHFNTAISQMMV 681

Query: 420 LVSEV 424
            ++E 
Sbjct: 682 FINEA 686


>gi|225629915|ref|YP_002726706.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782844|sp|C0R573|SYL_WOLWR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225591896|gb|ACN94915.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 838

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 25  KQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           ++  ++ +++  +N  N R     + +SY+
Sbjct: 85  RDNNISPEIWTKENIDNMRAQLKSIGLSYN 114



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 25/149 (16%)

Query: 288 KKVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           K++ + G  +  G  EK+SKS  N +DP  +IE+ G D  R F++ +    KD  +  DG
Sbjct: 595 KELIARGTKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDG 654

Query: 346 LKKRVNADLANGIGNLVSRSVSMILK------DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           ++         G    V++   M+++       YD    T G   E  + I     ++L 
Sbjct: 655 VE---------GCSRYVNKLWRMVMQLKPVNMHYDNKSVT-GGLLEYRKKI----HKLLH 700

Query: 400 EIRENMQNQLIHRALA---QVISLVSEVD 425
            + ++++N  ++  +A   ++ +L++E+D
Sbjct: 701 GLTDDLENCRLNCVVAKFREMTNLIAEID 729


>gi|331703680|ref|YP_004400367.1| Leucyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802235|emb|CBW54389.1| Leucyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 804

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K YI     YP+ A  H+GH       DV +RF R+ G DVL   G D  G    + A
Sbjct: 29  EKKAYILDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG--- 117
              G   + F  QN  NF+   + +  S  YD  I T +  ++ T + ++K++  KG   
Sbjct: 89  LKTGNDPREFTLQNIENFKIQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLAE 148

Query: 118 --DI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             DI    C      L ++     D +     G+Y   +    QW+       +++ Y D
Sbjct: 149 NRDIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWV------LKITDYAD 202

Query: 175 KLL 177
           KLL
Sbjct: 203 KLL 205



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 12/112 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFL--- 279
           +I Y+  D+  N +  T   D       K+ P DL++ G++    H +Y   W  FL   
Sbjct: 498 FIAYILADSKNNLIDLTS--DEAKKRLEKWLPVDLYIGGQEHAVGHLLYSRFWTHFLYDL 555

Query: 280 --LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             L  N P  K++F+ G IL     K+SKS GNVI+P +VI+  G DALR +
Sbjct: 556 GLLPTNEPF-KRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHGSDALRLY 606


>gi|194396969|ref|YP_002036956.1| leucyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690847|sp|B5E6T0|SYL_STRP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194356636|gb|ACF55084.1| leucyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|149203918|ref|ZP_01880886.1| isoleucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149142360|gb|EDM30405.1| isoleucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 983

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 17/140 (12%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           ++ K G K+  LS      GI  PDD +    I+ VW D+ + +       D  DGS+  
Sbjct: 564 AWYKEGAKERFLS------GIVNPDDWRKVDDILDVWFDSGSTHAFV--LRDREDGSEDG 615

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
              ADL++ G D  R  FH+    A       P  + V +HGF L  KG K+SKSLGN +
Sbjct: 616 L--ADLYLEGTDQHRGWFHSSMLQACGTRGRAPY-RGVLTHGFTLDEKGNKMSKSLGNTV 672

Query: 312 DPIEVIEEVGVDALRYFLVR 331
            P EV+++ G D LR ++ +
Sbjct: 673 APEEVVKQYGADILRLWVAQ 692



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 70  YANGHLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPI 113


>gi|15615843|ref|NP_244147.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|14285778|sp|Q9K7S8|SYL_BACHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10175904|dbj|BAB07000.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 806

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           REK Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 30  REKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G +   F ++N   FR     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  IDTGNSPAEFTEKNINTFRRQIKSLGFSYDWDREVNTTDPDYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV+    + +  +++ Y D+LL  
Sbjct: 150 IDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITEYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            E    PE I  ++R
Sbjct: 205 LEELDWPESIKDMQR 219



 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W   L    +   K    K+++ G IL   
Sbjct: 514 DPEKLKKWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P ++I+  G D LR +
Sbjct: 574 NEKMSKSKGNVVNPDDIIDSHGADTLRLY 602


>gi|296129250|ref|YP_003636500.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas flavigena DSM 20109]
 gi|296021065|gb|ADG74301.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas flavigena DSM 20109]
          Length = 886

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 30/217 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +        G+LD+PD   A+ +P DL   G+DI+R   F ++   A L S +
Sbjct: 524 IMDTWATSSLTPQIVCGWLDDPD-LFARTFPMDLRPQGQDIIRTWLFSSVV-RAHLESGS 581

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           LP      S   +    +K+SKS GNV+ P+ ++EE G DA+RY+               
Sbjct: 582 LPWKHAAISGWILDPDRKKMSKSKGNVVTPLGLLEEHGSDAVRYWAA------------- 628

Query: 344 DGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
                R+  D A  +G + + R +++ + +    + +   F  +DE +    + V Q + 
Sbjct: 629 ---SARLGTDAAFEVGQMKIGRRLAIKVLNASKFVLS---FGPADEPVSLDAAAVTQPL- 681

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
               ++ +   LA+V+   +     +D  +  EL +T
Sbjct: 682 ----DRAMLAGLAEVVEQATAALDAYDHTRALELTET 714



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ERE+++ I T     +   H+GH +     DV+ARF R+ G +VL+  G D++G    + 
Sbjct: 50  EREQVFSIDTPPPTVSGSLHVGHVFSYTHTDVVARFQRMRGREVLYPMGWDDNGLPTERR 109

Query: 62  AQN 64
            QN
Sbjct: 110 VQN 112


>gi|224045554|ref|XP_002199212.1| PREDICTED: similar to leucyl-tRNA synthetase 2, mitochondrial
           [Taeniopygia guttata]
          Length = 903

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDAVARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R   D L +S+  +  + T    ++   + L+ K+ + G +
Sbjct: 138 AVEHGLHPASWTQSNIQHMRKQFDALGLSFTWEREVTTCLPEYYKWTQYLFLKLFEAGIV 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 29/194 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP E+++E G+D LR +++      +D  +D          D   G+  
Sbjct: 638 EKMSKSKYNGIDPEEIVKEYGIDTLRLYILFAAPPEQDILWD-------AKTDAMPGVQR 690

Query: 361 LVSRSVSMILK----DYDGMIPTPGAFTESDES----ILSVCSRVLQEIRENM-QNQLIH 411
              R  +++ K       G +P P    + +++    I    + V+ E+ +   ++ L +
Sbjct: 691 WQIRLWALVTKLIEARTSGTMPNPELLNKKEKAEARKIWEQKNLVISEVTKYFTEDHLFN 750

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+++++SL + + +   A +P  L  T  + A          +  L I++    P +A+
Sbjct: 751 AAISRLMSLTNVLQQ---APRPLALHSTEFEDA----------LASLCIMVAPMAPHIAS 797

Query: 472 KIFDILFVADENRC 485
           +++  L       C
Sbjct: 798 EMWKGLAHVQNKLC 811


>gi|319639015|ref|ZP_07993773.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399919|gb|EFV80582.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 936

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|218899895|ref|YP_002448306.1| leucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226731225|sp|B7IL05|SYL_BACC2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218544919|gb|ACK97313.1| leucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 802

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G  VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYKVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|317010237|gb|ADU80817.1| leucyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 806

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I DVLAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDVLARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELLRDLET 204



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLDLDEPF-KQLVTQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAINP 635

Query: 361 LVSR 364
            +S+
Sbjct: 636 TLSK 639


>gi|313886594|ref|ZP_07820307.1| valine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923950|gb|EFR34746.1| valine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 887

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLG 308
           F+P  + V G DIL F    W A ++ A           KV+  G +   KG K+SKSLG
Sbjct: 492 FYPTSVLVTGPDILFF----WVARMIMAGYHFMGDRPFDKVYLTGIVRDDKGRKMSKSLG 547

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN----LVSR 364
           N  DPI+++++ G D +R  L+   + G D  YD+  +++  N    N I N    L ++
Sbjct: 548 NSPDPIDLMDKYGADGVRLGLMMATSAGNDLLYDESLVEQGRN--FCNKIWNSYRFLKTQ 605

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           SVS      D + P   +   + E   S+ +  + E+ +      I  A+  +  LV + 
Sbjct: 606 SVS------DEVKPDAASLI-AMEWFESLLASTMSELDDLFDKYRISDAVTLLYKLVRDD 658

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               Y +A KP          +  V   T+    Q+ ILL  F+P +  +++
Sbjct: 659 FSGIYLEAIKP----AYGTSMSRKVYERTIHYFEQIFILLHPFMPFITEELW 706


>gi|300715833|ref|YP_003740636.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061669|emb|CAX58785.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 860

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIAYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPTDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFVKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|218679906|ref|ZP_03527803.1| valyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 329

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W A ++   L  
Sbjct: 207 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHF 261

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 262 MKDEDGQPVEPFNTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 321

Query: 335 CGKD 338
            G+D
Sbjct: 322 QGRD 325


>gi|169834477|ref|YP_001693783.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688307|sp|B1I8Y2|SYL_STRPI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168996979|gb|ACA37591.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|168492209|ref|ZP_02716352.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183573589|gb|EDT94117.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 NDLDELDWPESIKDMQR 221


>gi|326796280|ref|YP_004314100.1| leucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547044|gb|ADZ92264.1| leucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 815

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 108/236 (45%), Gaps = 36/236 (15%)

Query: 252 KAKFW-PADLHVIGKD--ILR------FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +  IL       FH +   A L++++ P  K++ + G +   G K
Sbjct: 516 EANYWLPVDQYIGGVEHAILHLLYARFFHKLLRDAGLVTSDEPF-KRLLTQGMVNKDGSK 574

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +DP E+IE+ G D +R F++      +   ++  G+         +G    +
Sbjct: 575 MSKSKGNTVDPQEMIEQYGADTVRLFMMFTAPPEQSLEWNDKGV---------DGASRFL 625

Query: 363 SRSVSMI---LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVI 418
            R  S+    L   D +     A +   +++       + ++ ++++  Q  + A+A V+
Sbjct: 626 RRLWSLSYQHLNAGDKVALDVDALSGEQKALRRKTHETIAKVSDDIERRQTFNTAIAAVM 685

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            L +E+ ++              DR+   L V  E +    +LL   VP +A++++
Sbjct: 686 ELCNEISKF-------------EDRSEQGLAVEREALEAAILLLSPIVPHVAHELW 728



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   Y  D  I T    ++   +  + ++ +KG  YK
Sbjct: 92  KNKTAPAKWTTENIAYMKGQLKQLGFGYDWDREIATCTPEYYKWEQWFFTQLVEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G  G    A   PV   E   +F +++ Y ++LL+
Sbjct: 152 KTSAVNWDPVDQTVLANEQVIDGC-GWRSGA---PVVRKEIPQWFIKITDYAEELLN 204


>gi|270292031|ref|ZP_06198246.1| leucine--tRNA ligase [Streptococcus sp. M143]
 gi|270279559|gb|EFA25401.1| leucine--tRNA ligase [Streptococcus sp. M143]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|42561235|ref|NP_975686.1| leucyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492733|emb|CAE77328.1| leucine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 810

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K YI     YP+ A  H+GH       DV +RF R+ G DVL   G D  G    + A
Sbjct: 35  EKKAYILDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG--- 117
              G   + F  QN  NF+   + +  S  YD  I T +  ++ T + ++K++  KG   
Sbjct: 95  LKTGNDPREFTLQNIENFKIQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLAE 154

Query: 118 --DI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             DI    C      L ++     D +     G+Y   +    QW+       +++ Y D
Sbjct: 155 NRDIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWV------LKITDYAD 208

Query: 175 KLL 177
           KLL
Sbjct: 209 KLL 211



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 12/112 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFL--- 279
           +I Y+  ++  N +  T   D       K+ P DL++ G++    H +Y   W  FL   
Sbjct: 504 FIAYILANSKNNLIDLTS--DEAKKRLEKWLPVDLYIGGQEHAVGHLLYARFWTHFLYDL 561

Query: 280 --LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             L  N P  K++F+ G IL     K+SKS GNVI+P +VI+  G DALR +
Sbjct: 562 GLLPTNEPF-KRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHGADALRLY 612


>gi|313678547|ref|YP_004056287.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950479|gb|ADR25074.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 779

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I D LARF+R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRKGFNVLHPFGWDAFGLPAENAAIKH 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDKGDIY 120
            +  K +  QN  +  +    L IS   F    E    D     W+     K+ +KG +Y
Sbjct: 93  NIHPKTWTYQNISSMNENIKKLGIS---FAWNYECITSDEIYTRWEQEIFIKMWNKGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W + +D+    +++V    +G+ +     P++  E E Y+ ++  Y  +L   
Sbjct: 150 RKKALLNWCN-KDKTVLANEQV---INGRCWRCDE-PIEHKETEQYYLKIRDYAKELQES 204

Query: 180 YE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIMYVW 231
            E    + P+ +L ++  N  I++    L   S S K+    +++      D   + ++ 
Sbjct: 205 LELLKGNWPDKVLSMQ--NNWINYKTGFLATFSDSAKSLKSNVEVFISDKKDLDIVNFIC 262

Query: 232 IDA---LTNYLTTTGYLD 246
           I A   L + L    YLD
Sbjct: 263 ISANHNLVDELIKNNYLD 280



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 33/58 (56%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + G +L  G K+SKS GN + P +++E+ G D +R F++      K+  +  D ++
Sbjct: 529 LLTQGMVLKDGAKMSKSKGNTVSPTDLLEKYGADTVRLFILFAAPPAKELEWSDDSVE 586


>gi|307704110|ref|ZP_07641038.1| leucyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622332|gb|EFO01341.1| leucyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|124514188|gb|EAY55703.1| Valyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 904

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP  +   +  +L  ++T     D PD    +F+P  L V G DIL     +W A 
Sbjct: 456 KLSADPDVLDTWFSSSLWPFVTLGWPEDTPD--LRRFYPTTLLVTGFDIL----FFWVAR 509

Query: 279 LLS-----ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++         P  + V+ H  +  + G+K++KS GNV+DP+E+++  G DA R  LV  
Sbjct: 510 MVMMGYHFTGKPPFRDVYIHALVRDQFGQKMTKSKGNVVDPLEIMDRYGTDAFRMTLVHM 569

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            + G+D          R++ +   G  N VS+ +    +  +   P      E DE  L 
Sbjct: 570 ASPGRD---------IRLSTERVEGFRNFVSK-IWNAFRYVERFAPGETRIPEIDEQSL- 618

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                     ++  N+ I  +L+Q    V+++ RYF
Sbjct: 619 ----------QSPANRWILVSLSQA---VADMRRYF 641



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           S  I  PN   + H+GHA  + + DV+ARF +++G DVL+  GTD  G
Sbjct: 53  SMVIPPPNITGRLHMGHALNITLQDVVARFRKMEGQDVLWIPGTDHAG 100


>gi|254168772|ref|ZP_04875613.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622209|gb|EDY34783.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 858

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 21/251 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288
            W+D+  + L  T +  + D    K +P  L     DI+R  A Y      S     P K
Sbjct: 455 TWVDSSISPLYNTFWARD-DEKFEKLYPMSLRPQSHDIIRTWAFYTILRCKSVTGEKPWK 513

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +   GFIL   G  +  S GNV+DP+E+I+E G DALR+F  +        F  KD ++
Sbjct: 514 DIAIDGFILAPDGRPMHTSWGNVVDPLEIIDEYGADALRFFAAKCTPGEDTPFRYKDTIR 573

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQ 406
            R        +G  V  ++       DG+   P       D+ I+S  S V+ E  + M 
Sbjct: 574 GRKVIIKLYNLGKFVGSAIK------DGIKEVPVEKLNFMDKWIISKYSEVVDEATKYMD 627

Query: 407 NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQ 463
                +A+  V + +  V  D Y +  K     + N +     LY V + +++  A ++ 
Sbjct: 628 EYRYDKAVKLVENFMWNVFADHYVEMVK----HRLNEESTKYTLYNVFLGIVKMFAPIM- 682

Query: 464 AFVPKLANKIF 474
              P +  +I+
Sbjct: 683 ---PHITEEIY 690


>gi|307708096|ref|ZP_07644564.1| leucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615881|gb|EFN95086.1| leucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 833

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 NDLDELDWPESIKDMQR 221


>gi|283853205|ref|ZP_06370457.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571378|gb|EFC19386.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 837

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 12/196 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+ARF R++G +VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARFKRMEGNNVLHPMGWDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +   N  + R     L  SYD    I T    ++   +  + K  +KG +Y 
Sbjct: 91  KHKLHPASWTISNIDSMRTQLKRLGYSYDWRREIATCHPGYYVHEQRFFLKFLEKGLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W         N+  +    DG  +     PV   + E +F R++ Y ++LL+  
Sbjct: 151 KHSPQNWCETCGTVLANEQVI----DGCCWRCDQ-PVVQKDLEQWFLRITDYAEELLADL 205

Query: 181 E----SHPEFILPIER 192
           +      PE +L ++R
Sbjct: 206 DKLTGGWPERVLTMQR 221



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 19/195 (9%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           NPD  +  +W P D ++ G +    H +Y   F+        L+ + P  + + + G ++
Sbjct: 524 NPD--EVGYWLPVDQYIGGIEHAILHLLYSRFFVKALRDCGYLAFDEPF-QNLLTQGMVI 580

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVN 351
             G K+SKS GNV+DP  +I   G D +R F++      KD  +   G++       R+ 
Sbjct: 581 KDGSKMSKSKGNVVDPDLMIGRYGADTVRVFILFAAPPEKDLEWSDTGIEGASRFLSRLW 640

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
             +   +G L+    +       G+   P  F E      +  ++   +IRE  Q N  I
Sbjct: 641 RLVTEELGGLLMPVAACAPAGELGIDGLPPVFAELRRREHATAAKAGADIRERFQFNTAI 700

Query: 411 HRALAQVISLVSEVD 425
             A+  V  L + VD
Sbjct: 701 AAAMELVNFLYANVD 715


>gi|258545170|ref|ZP_05705404.1| leucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519595|gb|EEV88454.1| leucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 868

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N  V    +   N    ++    L   I +   + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  NHQVAPAAWTYSNIDYMKNQLKSLGFAIDWSRELATCKPDYYRWEQWLFTRLFEKGLIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y ++LL
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYFRITDYAEELL 203


>gi|227530427|ref|ZP_03960476.1| leucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227349659|gb|EEJ39950.1| leucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 814

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 36  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGYNVLHPMGWDAFGLPAEQ 95

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F +QN  +FR+    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 96  YALKTGHNPKSFTNQNIDHFRNQIQSLGFSYDWDREVNTTDPEYYKWTQWIFEQLYKKGL 155

Query: 119 IYK 121
            Y+
Sbjct: 156 AYE 158



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 104/236 (44%), Gaps = 40/236 (16%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 530 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGANHEKMSK 589

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++E+ G D LR + +      +   +D++GL         +G    + R 
Sbjct: 590 SKGNVVNPDDIVEKYGADTLRLYEMFMGPLTESVPWDEEGL---------HGSYKWIQRV 640

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +++ + + +      F  +D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 641 WRLLMDENNHLRDRVSTF--NDGKLTKVYNQTVKKVTEDYERMHFNTAISQLMVFVNEAF 698

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  D                    + VE +     ++   +P +A +++    V+D
Sbjct: 699 KADD--------------------LPVEYMEGFVKMISPVIPHVAEELWSHFNVSD 734


>gi|217076920|ref|YP_002334636.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|254782447|sp|B7IGT1|SYI_THEAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217036773|gb|ACJ75295.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 910

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VWID+  ++            SK + +P DL++ G D  R  F +  + +   +   P  
Sbjct: 523 VWIDSGCSFEAVIR-------SKGEKFPVDLYLEGDDQHRGWFQSSIFMSVAHTGQAPY- 574

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K V +HGFI  + G K+SKSLGNVIDP E++++ G D LR ++        I  GK+   
Sbjct: 575 KSVVTHGFIKDEHGRKMSKSLGNVIDPKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQ 634

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  + K++   L   +GNL S      L ++D ++P
Sbjct: 635 QQVEVYKKIRNTLRFLLGNL-SNFTKNDLVEFDKLLP 670


>gi|149280348|ref|ZP_01886469.1| valine--tRNA ligase (valyl-tRNA synthetase) [Pedobacter sp. BAL39]
 gi|149228897|gb|EDM34295.1| valine--tRNA ligase (valyl-tRNA synthetase) [Pedobacter sp. BAL39]
          Length = 889

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 36/275 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           DP  +M  W  +    ++      NPD  +  ++ P +  V   +IL F    W A ++ 
Sbjct: 465 DPD-VMDTWFSSWLWPISVFDGFKNPDNKEINYYYPTNDLVTAPEILFF----WVARMIM 519

Query: 282 ANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A            V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     
Sbjct: 520 AGHEFRGAKPFTNVYLTGIVRDKLGRKMSKSLGNSPDPIGLIEKYGADGVRVGMLLCSPA 579

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSV 393
           G D  +D+   ++  N   AN I N        ++K +  D  +P P       ++IL  
Sbjct: 580 GNDLMFDESYCEQGRN--FANKIWNAFR-----LVKGWEVDASLPNPNG-----QAILWF 627

Query: 394 CSR---VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
            SR    L EI EN +   +  AL     LV +     Y +  KP      +P  A T L
Sbjct: 628 ESRFNEALAEIEENFKQYRLSEALMTSYKLVWDDFCAWYLEMVKP---AYQHPIDAET-L 683

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF-DILFVADE 482
            VT+    ++  LL  ++P L  +++ D LF   E
Sbjct: 684 RVTIGFFEKILTLLHPYMPFLTEELWHDELFGEKE 718


>gi|306832631|ref|ZP_07465770.1| leucine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425239|gb|EFM28366.1| leucine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 837

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 34  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 94  AMDTGNDPAEFTAKNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 153

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++L
Sbjct: 154 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERL 207

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 208 LEDLEDLDWPESIKDMQR 225


>gi|254190924|ref|ZP_04897430.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254259088|ref|ZP_04950142.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|189083243|sp|Q3JNN1|SYL_BURP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157938598|gb|EDO94268.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254217777|gb|EET07161.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 864

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|145638258|ref|ZP_01793868.1| leucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272587|gb|EDK12494.1| leucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751412|gb|ADO81396.1| Leucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 861

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            +  P++
Sbjct: 206 LDPLPQW 212


>gi|225464161|ref|XP_002269487.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 502

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 53/220 (24%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   E     I+P ER  ++ +   S +KD  +SR+ + WG +IP   
Sbjct: 186 WFVTMEPLAEKALQAVERGELTIMP-ERFEKIYNHWLSNIKDWCISRQLW-WGHRIPVWY 243

Query: 222 -----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNP 248
                 + +YI+                              W  +     +T G+ D  
Sbjct: 244 IVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVS 303

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-----H 298
                KF+P  +   G DIL F    W A ++   +     V     + HG I       
Sbjct: 304 TQDFKKFYPITVLETGHDILFF----WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQVSF 359

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +G K+SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 360 QGRKMSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 398


>gi|163782779|ref|ZP_02177775.1| leucyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881900|gb|EDP75408.1| leucyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 605

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 6/176 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     I D +ARF ++ G ++L   G D  G     AA  
Sbjct: 31  DKFYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLKMKGKNLLHPMGWDAFGLPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +  +N    +    +L  SY  D  + T +  ++   + ++ K+ ++G  Y+ 
Sbjct: 91  QGIHPAKWTYENIDYMKRQLKLLGFSYDWDREVATCDPEYYRWNQWIFLKMYERGIAYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                +   DE    +++V +G   +       P+   E   +F +++AY ++LL 
Sbjct: 151 TAVVNWCPHDETVLANEQVIEGKCWRC----GTPIVQREIPSWFLKITAYAERLLE 202


>gi|121608058|ref|YP_995865.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166231650|sp|A1WGU0|SYL_VEREI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121552698|gb|ABM56847.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 907

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 6/178 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  +N    +     L ++ D    + T +  ++   + L+ K+ DKG  Y+
Sbjct: 92  KNGMPPARWTRENIAYMKQQMQALGLAIDWSRELATCDPGYYKWNQWLFLKMLDKGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                 +   D+    +++V +G  G    A    V+  E  GY+ +++ Y ++LL++
Sbjct: 152 KTQVVNWDPVDQTVLANEQVNEG-KGWRTGAV---VEKREIPGYYLKITDYAEELLAF 205


>gi|53720546|ref|YP_109532.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126451947|ref|YP_001067687.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167740200|ref|ZP_02412974.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167904281|ref|ZP_02491486.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217420600|ref|ZP_03452105.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242314927|ref|ZP_04813943.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254199150|ref|ZP_04905565.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254299271|ref|ZP_04966721.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|60390678|sp|Q63QT6|SYL_BURPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230618|sp|A3NZB6|SYL_BURP0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52210960|emb|CAH36948.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126225589|gb|ABN89129.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157808838|gb|EDO86008.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|169656980|gb|EDS88377.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217396012|gb|EEC36029.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242138166|gb|EES24568.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 864

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|294085220|ref|YP_003551980.1| Leucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664795|gb|ADE39896.1| Leucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 862

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA 
Sbjct: 36  KPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARFRRAQGFNVLHPMGWDAFGLPAENAAM 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G+    +  +N    R     + +SYD   +    T   +    R+  K +       
Sbjct: 96  ERGIHPGKWTVENIAAMRTQLKSMGLSYDWDRELATCTPDYYQHEQRMFLKFLEAGLAYR 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K  +  W  + +    N+  V    DG+ + +   PV+      +F R++ Y D LL+
Sbjct: 156 KESWVNWDPVENTVLANEQVV----DGRGWRSG-APVERRLLSQWFLRITKYADDLLA 208


>gi|196233312|ref|ZP_03132157.1| leucyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196222617|gb|EDY17142.1| leucyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 909

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 43/266 (16%)

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLS---A 282
           +V +DA   ++T  G ++ P G+K +    DL+V G +    H +Y   W   L      
Sbjct: 592 FVGVDAERYWMT--GTVEQPAGAKVRPGGVDLYVGGTEHAVLHLLYARFWHKVLFDLGYV 649

Query: 283 NLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + P P +++ + G IL + G+K+SKS GNV++P +VI E G DALR + +      +   
Sbjct: 650 STPEPFQRLVNQGIILGEDGQKMSKSRGNVVNPDDVITEYGADALRCYEMFMGPLEQTKP 709

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRV 397
           +   G++         G+   ++R   + +++      ++ +     E D++ L V    
Sbjct: 710 WSMAGVE---------GVARFLARVWRLAVEENQAGEWVLSSALQDIEPDKAQLKVIHAT 760

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++++ E++++   + A++Q++  V+     F    P       P +A          +R 
Sbjct: 761 IKKVGEDIESLGFNTAISQMMIFVNT----FTNANP------RPRKA----------LRS 800

Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483
           L  +L  F P L  ++++ L   DEN
Sbjct: 801 LLQVLNPFAPHLTEELWERLGF-DEN 825



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 18/129 (13%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+ A  H+GH       D++ R+ ++ G +VL   G D  G    + A
Sbjct: 42  RPKYYVLDMFPYPSGAGLHVGHPEGYTATDIIGRYKKMRGCNVLHPMGWDAFGLPAEQYA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G    V   +N   FR     +  +YD                 W++  +  D    
Sbjct: 102 IKTGQHPSVTTAENVGRFRTQLKKIGFAYD-----------------WQREVNTTDPGYY 144

Query: 123 CYSGWYSLR 131
           C++ W  LR
Sbjct: 145 CWTQWIFLR 153


>gi|149017948|ref|ZP_01834407.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147931512|gb|EDK82490.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPAD+++ G D  R  FH+    A       P  K V +HGF+L  KG K+SKS+GNV+ 
Sbjct: 555 WPADMYLEGSDQHRGWFHSSLLTAVATRGQAPY-KTVLTHGFVLDGKGRKMSKSMGNVVA 613

Query: 313 PIEVIEEVGVDALRYFLVRE 332
           P  +I++ G D LR ++  E
Sbjct: 614 PDAIIKKYGADILRLWVAAE 633


>gi|256847547|ref|ZP_05552993.1| leucyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256716211|gb|EEU31186.1| leucyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 806

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ Q  H+GH       DV+AR  R+ G +VL   G D  G    + A
Sbjct: 30  KKKYYALDMFPYPSGQGLHVGHPEGYTATDVMARMKRMQGFNVLHPMGFDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K F ++N  +FRD    L  SY  D  + TT+ +++   + +++++  KG  Y
Sbjct: 90  LKTGHNPKGFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKYYKWTQWIFEQLYKKGLAY 149

Query: 121 K 121
           +
Sbjct: 150 E 150



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLPK---KVFSHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W  FL    + P P+   K+ + G IL    EK+SK
Sbjct: 522 YWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFMKLVNQGMILGSNHEKMSK 581

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P E++++ G D LR + +      +   +D  GL         +G    V R 
Sbjct: 582 SKGNVVNPDEIVDQYGADTLRLYEMFMGPLTESVPWDPKGL---------HGANKWVHRV 632

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +I+ D + +       T +D  +  V ++ ++++ E+ +    + A++Q++  V+E 
Sbjct: 633 WRLIMDDNNHL--RDRISTINDGKLDKVYNQTVKKVTEDYERMHFNTAISQLMVFVNEA 689


>gi|86750009|ref|YP_486505.1| valyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86573037|gb|ABD07594.1| valyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 972

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 41/270 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL---- 280
           ++  W  +     +T G+   PD +    +++P ++ V G DI+ F    W A ++    
Sbjct: 511 VLDTWFSSALWPFSTLGW---PDETPELDRYYPTNVLVTGFDIIFF----WVARMMMMGL 563

Query: 281 --SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
              +++P P  V+ H  +   KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+
Sbjct: 564 HFKSDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLNLIDQYGADALRFTLAAMAAQGR 622

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGM-IPTPGAFTESDES----IL 391
           D          ++ +    G  N  ++  +     + +G   P    +T + E+    I 
Sbjct: 623 D---------IKLASSRVEGYRNFATKLWNACRFAEMNGCAAPKEFDYTAAKETLNRWIA 673

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST--- 446
               R  +E+ E +++   + A       V  V  D Y +  KP  + + +  +A T   
Sbjct: 674 HEAVRATREVTEAIESYRFNDAAGAAYRFVWNVYCDWYLELAKPVLMGEESAAKAETRAM 733

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +   E+++    LL  F+P +  +++ +
Sbjct: 734 VAWARDEILK----LLHPFMPFITEELWAV 759



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 55  SIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGI 103

Query: 68  TTKVFVDQN 76
            T++ V++ 
Sbjct: 104 ATQMVVERQ 112


>gi|126440306|ref|YP_001060426.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|167817415|ref|ZP_02449095.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167825822|ref|ZP_02457293.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167847306|ref|ZP_02472814.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167895893|ref|ZP_02483295.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167912541|ref|ZP_02499632.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167920495|ref|ZP_02507586.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|226196835|ref|ZP_03792414.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|166230619|sp|A3NDK5|SYL_BURP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126219799|gb|ABN83305.1| leucine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|225931095|gb|EEH27103.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 864

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|319407774|emb|CBI81421.1| Leucyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 874

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 8/183 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 32  EHEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V  KV+   N +  R     L  S D   +F  T +  ++   ++L+     KG I
Sbjct: 92  MQNKVHPKVWTYDNIKVMRKQLQQLGFSLDWSREFA-TCDVNYYHRQQMLFLDFYQKGLI 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V    DG+ + +    V+  E   +FF++S + D LL+ 
Sbjct: 151 SRQVAKVNWDPVDQTVLANEQV---VDGRGWRS-GALVEQRELTQWFFKISDFSDDLLAG 206

Query: 180 YES 182
            E+
Sbjct: 207 LET 209



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++          +  
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPERDVIWSESGIEG--AHRFVQRVWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ S   +LK+        GA  E  ++      R L  + ++++    +RA+A++  L
Sbjct: 689 LVALSAP-VLKEVKSCAGQQGAALELSKA----AHRTLCAVEDDLEKLAFNRAVARLYEL 743

Query: 421 VSEV 424
           ++ +
Sbjct: 744 LNVI 747


>gi|295704836|ref|YP_003597911.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294802495|gb|ADF39561.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 1032

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 13/259 (5%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENNELFRKQF-PADVIAEGIDQTRGWFYSLMAVSTLFTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K+V S G +L   G+K+SKS GN +DP+E+I   G DALR+ ++ + A      + 
Sbjct: 572 APY-KRVLSLGHVLDENGQKMSKSKGNALDPVELIHTFGADALRWAILADSAPWNPKKFS 630

Query: 343 K---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +      K +V   L N  G  V   +   L  YD         T+ DE ILS     ++
Sbjct: 631 ERVVQEAKSKVIDTLVNVYGFYV---LYAKLDGYDPKQTYELKKTKLDEWILSRLHSTVK 687

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQL 458
               ++++     A  ++ + + E+  ++  +          D      Y T+ EV+  L
Sbjct: 688 RATVHLEDYGFTNAAREIAAFIEELSNWYVRRSRDRFWSEGMDGEKAAAYDTLHEVLVTL 747

Query: 459 AILLQAFVPKLANKIFDIL 477
           + LL  F P +A+ + + L
Sbjct: 748 SQLLAPFTPFVADDVHENL 766



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTK----- 70
           N  PH+GHA    I DV+AR+  + G  V+   G D HG  +    +   G++ K     
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMTGHQVIRKAGWDTHGLPVELGVEKQLGISGKHDIEK 109

Query: 71  ----VFVDQN-------SRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                F+++         + +R   + L   +  +D   T +  + ++   +   I DKG
Sbjct: 110 YGVEAFINKCKESVFVYEKQWRTFTEQLGYWVDMEDPYITLKNSYIESVWNVLGTIHDKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|227515576|ref|ZP_03945625.1| leucine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086006|gb|EEI21318.1| leucine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|299783451|gb|ADJ41449.1| Leucine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 805

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN  +FRD    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPADFTNQNVDHFRDQIQSLGFSYDWDREVNTTDPNYYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 521 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 580

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D+ GL         +G    V R 
Sbjct: 581 SKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPWDEKGL---------HGSNKWVQRV 631

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      +  +D  +  V ++ ++++ ++ +    + A++Q++  V+E 
Sbjct: 632 WRLLMDDNNHLRDRVSTY--NDGKLTKVYNQTVKKVTDDFERMHFNTAISQLMVFVNEA 688


>gi|149011125|ref|ZP_01832430.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764761|gb|EDK71691.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|24380292|ref|NP_722247.1| leucyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|32171544|sp|Q8DS85|SYL_STRMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24378305|gb|AAN59553.1|AE015018_7 putative leucyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  QN   F+     L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGHDPADFTAQNIATFKRQIKSLGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEDLDWPESIKDMQR 221


>gi|331267104|ref|YP_004326734.1| leucyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683776|emb|CBZ01394.1| leucyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  +    PE I  ++R
Sbjct: 205 NDLDELDWPESIKDMQR 221


>gi|225856014|ref|YP_002737525.1| leucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782840|sp|C1CID7|SYL_STRZP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225726165|gb|ACO22017.1| leucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|254168672|ref|ZP_04875514.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596853|ref|YP_003483549.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622298|gb|EDY34871.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534640|gb|ADD08987.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 858

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 21/251 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288
            W+D+  + L  T +  + D    K +P  L     DI+R  A Y      S     P K
Sbjct: 455 TWVDSSISPLYNTFWARD-DEKFEKLYPMSLRPQSHDIIRTWAFYTILRCKSVTGEKPWK 513

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +   GFIL   G  +  S GNV+DP+E+I+E G DALR+F  +        F  KD ++
Sbjct: 514 DIAIDGFILAPDGRPMHTSWGNVVDPLEIIDEYGADALRFFAAKCTPGEDTPFRYKDTIR 573

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQ 406
            R        +G  V  ++       DG+   P       D+ I+S  S V+ E  + M 
Sbjct: 574 GRKVIIKLYNLGKFVGSAIK------DGIKEIPMEKLNFMDKWIISKYSEVVDEATKYMD 627

Query: 407 NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQ 463
                +A+  V + +  V  D Y +  K     + N +     LY V + +++  A ++ 
Sbjct: 628 EYRYDKAVKLVENFMWNVFADHYVEMVK----HRLNEESTKYTLYNVFLGIVKMFAPIM- 682

Query: 464 AFVPKLANKIF 474
              P +  +I+
Sbjct: 683 ---PHITEEIY 690


>gi|149006009|ref|ZP_01829738.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762365|gb|EDK69326.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332076703|gb|EGI87165.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|72011018|ref|XP_780299.1| PREDICTED: similar to putative methionyl tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
 gi|115960163|ref|XP_001189754.1| PREDICTED: similar to putative methionyl tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 289

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 30/203 (14%)

Query: 318 EEVG-----VDALRYFLVREIACGKDGFYDKDGLKKRV----NADLANGIGNLVSRSVSM 368
           +EVG      D    F V E+   K    D+D    +V    NA+LA+  GNL+SR  + 
Sbjct: 81  QEVGDQLEETDEFDKFGVVELGSEKQVETDEDYSDMKVSALLNAELADTYGNLLSRVAAP 140

Query: 369 ILKDY-------DGMIPT-PGAFTE---SDESILSVCS--RVLQEIRENMQNQLIHRALA 415
            L            + P+ PG  T    +DE  L V S  R+   + E+ +  L +R L 
Sbjct: 141 TLNPQQVFPVLDSNLFPSRPGQSTTARTTDEDYLLVESVKRLPDIVGEHYEQFLFYRGLE 200

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++++ +   + +    +PW L K   DR    ++++VT+E +R   IL Q  VP L +++
Sbjct: 201 EIMTCLRMANAFVQRHEPWNLTKNPIDRPWLDSIIHVTMETLRVCGILTQPIVPDLTDRL 260

Query: 474 FDILFVADENR------CFQSLD 490
              + V    R      CF++L+
Sbjct: 261 LTKIGVEKMERSWEQLKCFEALE 283


>gi|114331418|ref|YP_747640.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313769|sp|Q0AG57|SYL_NITEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114308432|gb|ABI59675.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 868

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 6/186 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  +   YP+ + H+GH     I DVL+R+ R+ G +V+   G D  G     
Sbjct: 29  IPDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYRRMQGYNVMQPMGWDAFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   GV    +   N    R     L ++ D    + T +  ++   + L+ ++ +KG 
Sbjct: 89  AAIQKGVPPAKWTYDNIAYMRSQLQSLGLAIDWKRELATCDPEYYRWNQWLFLRMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V  G   +        V+  E  GY+  ++ Y D+LL+
Sbjct: 149 AYQKTQVVNWDPVDQTVLANEQVIDGCGWRTGAV----VEKREIPGYYLAITRYADELLA 204

Query: 179 YYESHP 184
             E+ P
Sbjct: 205 GLENLP 210


>gi|262277237|ref|ZP_06055030.1| valyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224340|gb|EEY74799.1| valyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 880

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 10/91 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSL 307
           +F+   + V G DI+ F    W A ++   L     +P +KV+ H  +   KG+K+SKS 
Sbjct: 478 RFYKTSVLVTGFDIIFF----WVARMMMMGLHFMNEVPFEKVYVHALVRDEKGQKMSKSK 533

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP+ +IEE G DALR+ L+   + G+D
Sbjct: 534 GNVIDPLTIIEEFGADALRFTLISMSSPGRD 564



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    I D+L RF+R  G++ L+  GTD           +AG+
Sbjct: 38 SIVIPPPNVTGSLHMGHALNNSIQDLLIRFNRNKGIETLWQPGTD-----------HAGI 86

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 87 ATQLVVEK 94


>gi|268316289|ref|YP_003290008.1| valyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333823|gb|ACY47620.1| valyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 895

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 60/280 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +      T G+ D  PD     F+P  + V G DIL     +W A ++ A + 
Sbjct: 457 VLDTWFSSWLWPFATLGWPDQTPD--LEYFYPTTVLVSGYDIL----FFWIARMIMAGIH 510

Query: 286 LPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
              K     VF  G +  K G  +SKSLGN IDP+E+I++ G DA+RY L   + C +  
Sbjct: 511 FTGKIPFRDVFITGMVKDKYGRWMSKSLGNGIDPLEMIDQYGADAVRYSLT--VLCTQGQ 568

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
               D  K  +  + AN I N  +                 G F E+D+       R L+
Sbjct: 569 DIKLDPSKFEMGRNFANKIWNAFN---------------VFGQFMETDDE-----GRPLR 608

Query: 400 EIRENMQNQ---LIHR----ALAQVISLVSE-VDRY-------------FDAQKPWELKK 438
           + R   + +   L+ R     L Q I+ V+E +DRY             +     W L+ 
Sbjct: 609 DYRRQRRFEELSLVERWMVTRLNQTIATVNEAIDRYRLNEALLTIYDLFWGDYCDWYLEL 668

Query: 439 TNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKIF 474
             P R   +    + + VE+  ++  LL  F+P +   ++
Sbjct: 669 IKPPRGQAMDDETIALAVELYEKMIQLLHPFMPFITEALW 708


>gi|168493951|ref|ZP_02718094.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576165|gb|EDT96693.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|168484637|ref|ZP_02709589.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042170|gb|EDT50216.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|148987995|ref|ZP_01819458.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147926459|gb|EDK77532.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|15900189|ref|NP_344793.1| leucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657179|ref|ZP_01407956.1| hypothetical protein SpneT_02001607 [Streptococcus pneumoniae
           TIGR4]
 gi|32171579|sp|Q97SS0|SYL_STRPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14971724|gb|AAK74433.1| leucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|327390672|gb|EGE89012.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|315185987|gb|EFU19751.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 809

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 16/185 (8%)

Query: 4   REKL-YISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           REK  Y+     YP+A+  H+GH       D+  R+ R+ G  VL   G D  G      
Sbjct: 33  REKRRYVLDMFPYPSAEGLHVGHPEGYTATDIYCRYLRMRGYQVLHPMGFDSFGLPAEIY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  ++N   FR     L  SY  D  I T    ++   + ++ K+ + G  
Sbjct: 93  AITTGTHPRITTERNINRFRKQIQSLGFSYDWDREIATHRPEYYKWTQWMFLKMYEMGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV------QWMEEEGYFFRLSAYQ 173
           Y      W+         ++EV +  +G      ++PV      QWM       R++AY 
Sbjct: 153 YMAEVPVWFCEALGTVLANEEVIQTPEGPRSERGNHPVIRKPLRQWM------LRITAYA 206

Query: 174 DKLLS 178
           D+LL 
Sbjct: 207 DRLLE 211



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 30/185 (16%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-G 300
            K  +W P DL+V G +    H +Y   W   L    L     P   ++ + G IL + G
Sbjct: 528 EKIDYWMPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVNTDEPF-MRLVNQGMILGEDG 586

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD-LANGIG 359
           EK+SKS GNV++P +++EE G D+LR +   E+  G          K  V      N + 
Sbjct: 587 EKMSKSRGNVVNPDDIVEEYGADSLRMY---EMFMGPLEATKPWSTKGLVGVHRFLNRVW 643

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           ++  R ++                 E D  +L +  + ++++ E+ ++   + A+AQ+++
Sbjct: 644 DISEREITD---------------EEPDPDLLKLLHKTIKKVTEDTEHLRFNTAIAQMMT 688

Query: 420 LVSEV 424
            ++E+
Sbjct: 689 YINEI 693


>gi|283471024|emb|CAQ50235.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 805

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|260663453|ref|ZP_05864343.1| leucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260551994|gb|EEX25047.1| leucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 805

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN  +FRD    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPADFTNQNVDHFRDQIQSLGFSYDWDREVNTTDPNYYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 521 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 580

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D+ GL         +G    V R 
Sbjct: 581 SKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPWDEKGL---------HGANKWVQRV 631

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      +  +D  +  V ++ ++++ ++ +    + A++Q++  V+E 
Sbjct: 632 WRLLMDDNNHLRDRVSTY--NDGKLTKVYNQTVKKVTDDFERMHFNTAISQLMVFVNEA 688


>gi|72382161|ref|YP_291516.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123732640|sp|Q46L15|SYL_PROMT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72002011|gb|AAZ57813.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 862

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 5/172 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  +   YP+   H+GH    +I DVLAR+ R+ G +VL   G D  G     AA    
Sbjct: 44  FYALSMFPYPSGSLHMGHVRNYVITDVLARYKRMKGFNVLHPMGWDSFGLPAENAAIERE 103

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           ++   + D+N    +D  D L +S D    + T ++ ++   + ++ ++      Y+   
Sbjct: 104 ISPSTWTDKNISQMKDQLDRLGLSIDWSKEVTTCKEEYYKWTQYIFNQLHKNNLAYQKKA 163

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           +  +   D+    +++V   A+G+ + +    V+  E   +F R++++ + L
Sbjct: 164 TVNWDPIDQTVLANEQV--DAEGKSWRSGAK-VEKKELNQWFLRITSFAEDL 212


>gi|238791646|ref|ZP_04635284.1| Leucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238729262|gb|EEQ20778.1| Leucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 860

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDMTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|194337395|ref|YP_002019189.1| valyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309872|gb|ACF44572.1| valyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 903

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 19/157 (12%)

Query: 227 IMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           ++  W  +    LTT G+     DN D     F+P D  V G DI+ F    W A ++ A
Sbjct: 458 VLDTWFSSWLWPLTTLGWTEKQSDNDD--LRAFYPTDTLVTGPDIIFF----WVARMVMA 511

Query: 283 NL------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L      P     F+      KG K+SKSLGN  DPI+V++  G DALR+ ++     G
Sbjct: 512 GLYFKGAVPFRNVYFTSIIRDMKGRKLSKSLGNSPDPIKVMDTYGTDALRFTIIYIAPLG 571

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +D  + ++  K  +  + A  I N  SR V M  + Y
Sbjct: 572 QDVLFGEE--KCELGRNFATKIWN-ASRLVFMQREKY 605


>gi|194246647|ref|YP_002004286.1| isoleucyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807004|emb|CAP18439.1| Isoleucyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 912

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 36/171 (21%)

Query: 179 YYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIK--IPDD------------ 223
           +Y+ +   IL I+  N V S F K G      S   + WGIK  +P++            
Sbjct: 468 FYDENNIPILDIDVINHVASLFSKYG------SEIWYKWGIKDLLPEEYVKNQKFIHLFT 521

Query: 224 -PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
               IM VW D+ +++        N    K + +PAD+++ G D  ++   +  + ++S 
Sbjct: 522 KETDIMDVWFDSGSSF--------NILKLKNQNFPADIYLEGAD--QYRGWFNSSLIIST 571

Query: 283 ---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              N    K+V +HGF+L  KG+K+SKSLGN+IDP+++I++ G D LR ++
Sbjct: 572 AVYNHSPYKQVITHGFVLDGKGQKMSKSLGNIIDPLKIIQKKGADILRLWI 622



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---NAGVTTKV 71
           Y N   HIGHA   I+ D + RF  ++G   ++  G D HG  I  A     N    +K 
Sbjct: 58  YANGNIHIGHALNKILKDFILRFKTMNGYKTVYIPGWDTHGLPIEIAVSKKINKNDYSKA 117

Query: 72  FVDQNSRNF 80
              Q  +NF
Sbjct: 118 DFIQECKNF 126


>gi|158422191|ref|YP_001523483.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048039|sp|A8IMK0|SYL_AZOC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158329080|dbj|BAF86565.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 874

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K ++     YP+ + HIGH    ++ DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 33  RPKFFVMEMFPYPSGRIHIGHGRNYVMGDVLARYKRMQGFNVLHPMGWDSFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+  K +  +N  + ++   +L +S D
Sbjct: 93  ERGIHPKSWTYENIASMKEQLQLLGLSLD 121



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  NV+ P  V++  GVDA R+F++ +    +D  + + G++
Sbjct: 626 EKMSKSKKNVVPPEVVVDTYGVDAGRWFMLSDTPPERDSEWTQSGIE 672


>gi|126652388|ref|ZP_01724561.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126590809|gb|EAZ84923.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 1030

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 23/232 (9%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD+ + G D  R  F+++   + L +   P  K+V S G +L   G+K+SKS GN ++
Sbjct: 541 FPADVVIEGIDQTRGFFYSLLAVSTLFTGK-PAYKQVLSLGHVLDEHGQKMSKSKGNALE 599

Query: 313 PIEVIEEVGVDALRY-FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-- 369
           P+E+IE+ G DALR+ FLV          ++     K++  D  + + + +  +      
Sbjct: 600 PVELIEQYGADALRWAFLV------DSSPWNPKRFSKKIVVDAKSKLVDTLENTFKFYQL 653

Query: 370 ---LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
              + ++       G  T  D+ ILS     +Q +   M       A  ++  L+ E+  
Sbjct: 654 YANIDEFTYDATNTGTRTPLDQWILSRLHHAIQLVTTAMDEYQFTHATREIAQLMEELSN 713

Query: 427 YF---DAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++      + W    T   R + + LY   EV+  +  LL  F P +   I+
Sbjct: 714 WYIRRSRARFWAHGLTADKRGAFSTLY---EVLTNICRLLAPFTPFITEDIY 762



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTK 70
           N  PH+GHA+   I DV+ARF  + G  V    G D HG  +    + A G++ K
Sbjct: 50  NGLPHVGHAFGRTIKDVVARFKTMQGYLVERKAGWDTHGLPVELGVEKALGISGK 104


>gi|124516135|gb|EAY57643.1| Leucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 828

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 18/182 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y      YP+ + H+GH     I D LAR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KKTFYCLEMFPYPSGRIHMGHVRNYSIGDALARYKRMRGFNVLHPMGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   V+ +QN  + ++    L +SYD    + T    ++   +  + K  +KG  YK
Sbjct: 92  QRGIHPAVWTEQNIAHMKEQLSRLGLSYDWSREVTTCLPEYYRWNQWFFLKFYEKGLAYK 151

Query: 122 G------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                  C S    L +E            +G  +  + +PV     E ++ R++ Y  +
Sbjct: 152 KEGLLNWCDSCLTVLANEQV---------EEGLCWRCK-SPVTLRPMEQWYLRITDYAQE 201

Query: 176 LL 177
           LL
Sbjct: 202 LL 203



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 34/233 (14%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAFLLS------ANLPLP-KKVFSHGFILHKGEKIS 304
           A+ W P D ++ G +    H +Y   F  +       + P P + + + G +L  G K+S
Sbjct: 524 ARQWIPVDQYIGGVEHAILHLLYSRFFTRALKDLGFVDSPEPFRALLTQGMVLKDGSKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP ++IE  G D +R F +      KD  +D   ++          +G L  R
Sbjct: 584 KSKGNVVDPDQLIERYGADTVRLFTLFSAPPDKDLAWDDKAVEGAYRF-----LGRLYQR 638

Query: 365 SVSM-----ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVI 418
            + +           G   TP   + + + +L+     ++++  +++ N  ++ A+A+++
Sbjct: 639 VLELSRFPSPPPSSGGTGKTP--VSSAQKPLLAKIHETIRDVTFDLESNNQMNTAIARLM 696

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            L++             L   NP++A   L +  E    L +LL  F P L+ 
Sbjct: 697 ELLN------------ALGNGNPEKAEE-LPLLREGYTTLLLLLSPFAPHLSQ 736


>gi|154174333|ref|YP_001408523.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|189082988|sp|A7GZ81|SYL_CAMC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112803061|gb|EAU00405.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 821

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 6/175 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R +  +VL   G D  G     AA   
Sbjct: 36  KKYILSMFPYPSGRIHMGHVRNYSIGDALARYYRKNCFNVLHPIGFDSFGMPAENAAIKH 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+ D   + T++  +    +  + K+ +KG +Y+  
Sbjct: 96  KIHPKKWTYENIDYMKKELSSLGFSFSDRRMLATSDPLYTKWEQSFFIKMFEKGLVYRKS 155

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
               +   D+    +++V    DG  +   +  VQ  E  GY+F+++ Y ++LL+
Sbjct: 156 AIVNWCEHDQTVLANEQV---EDGCCWRCGNEVVQ-REFPGYYFKITQYAEELLN 206



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G+K+SKS GNV+DP ++I   G D  R F++
Sbjct: 577 LLTQGMVLKDGKKMSKSKGNVVDPDDIINRYGADTARLFIL 617


>gi|303255050|ref|ZP_07341126.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597880|gb|EFL64950.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|76808938|ref|YP_334822.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|76578391|gb|ABA47866.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 913

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 81  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 140

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 141 ANGVPPAQWTYENIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 199 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 253


>gi|309378324|emb|CBX23070.1| isoleucyl-tRNA synthetase [Neisseria lactamica Y92-1009]
          Length = 929

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 43/284 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVLKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            E+A  K+         +R+   L+    NL            +  +P      E D   
Sbjct: 639 GELAISKEILKRVTESYRRIRNTLSFLFANLSD------FNPIEDAVPQ-AEMVEIDRYA 691

Query: 391 LSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSE----------VDRYFDAQKPWELKKT 439
           L +  R+ + +  +   +   H A+ +++S  SE           DR +  Q     +++
Sbjct: 692 LVLARRLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTQADSRARRS 751

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 ----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|116490881|ref|YP_810425.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116091606|gb|ABJ56760.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 829

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 23/193 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 539 DPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLVNQGMILGTN 598

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P E+++  G DALR +         + F       K  + +   GI 
Sbjct: 599 HEKMSKSKGNVVNPDEIVDSYGADALRVY---------EMFMGPLTQSKPWSTESLAGIR 649

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +   D DG+ P     +E+D  +  + ++ ++++ E+      + A++Q++ 
Sbjct: 650 RYLDRVWRIFTSDGDGINPI--IVSENDHKLDKIFNQTVKKVTEDYAAMRFNTAISQMMV 707

Query: 420 LVSEVDRYFDAQK 432
            ++E    F A+K
Sbjct: 708 FINET---FKAEK 717



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ Q  H+GH       D++ARF+R+ G +VL   G D  G    + A
Sbjct: 50  KPKYYVMNMFPYPSGQGLHVGHPESYTATDIMARFNRMRGFNVLQPMGWDAFGLPAEQYA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F ++N ++F+     L  SY  D  I TT+  ++   + +++++  KG  Y
Sbjct: 110 IKTGHNPADFTNENIKHFKKQVKSLGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGLAY 169

Query: 121 K 121
           +
Sbjct: 170 E 170


>gi|293364314|ref|ZP_06611040.1| leucine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702720|ref|ZP_07639672.1| leucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317160|gb|EFE57587.1| leucine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623836|gb|EFO02821.1| leucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|121634249|ref|YP_974494.1| isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229751|sp|A1KS62|SYI_NEIMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120865955|emb|CAM09692.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131481|gb|EGC54188.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 929

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYTFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 50/141 (35%), Gaps = 30/141 (21%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDM-----ADVLDISYDDFIRTTE-------------KRHH 103
            +          D     FR++     A+ +     DFIR                K   
Sbjct: 106 VEKLHGK-----DMPKARFRELCREYAAEQVACQKKDFIRLGVLGDWDKPYLTMDFKTEA 160

Query: 104 DTCRILWKKISDKGDIYKGCY 124
           DT R+L       G+IYK  Y
Sbjct: 161 DTVRML-------GEIYKSGY 174


>gi|302333422|gb|ADL23615.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 804

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 574 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 634 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 677 ISQLMVFINECYKVDEVYKPY 697



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|237752432|ref|ZP_04582912.1| valyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375921|gb|EEO26012.1| valyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 882

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 64/135 (47%), Gaps = 21/135 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKFWPADLHVIGKDILRF 270
           KI  DP  ++  W  +     +T GY +   G +         +F+P  L + G DIL F
Sbjct: 448 KIMQDPD-VLDTWFSSALWPFSTLGYANGEFGKEELWNPSDMQEFYPNSLLITGFDILFF 506

Query: 271 HAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVD 323
               W A +L         LP P  ++ H  +  + G K+SKS GNVIDP+E IEE   D
Sbjct: 507 ----WVARMLMMGEHLLNELPYPD-IYLHALVRDEFGNKMSKSKGNVIDPLEKIEEYSAD 561

Query: 324 ALRYFLVREIACGKD 338
            LR+ L    A G+D
Sbjct: 562 VLRFTLAILCAQGRD 576



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ RF R+DG   L+  G D  G
Sbjct: 61 HIGHALNHTLIDIITRFKRMDGYKTLWQPGLDHAG 95


>gi|225860293|ref|YP_002741802.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|254782841|sp|C1CPD0|SYL_STRZT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225726398|gb|ACO22249.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
          Length = 833

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|218888174|ref|YP_002437495.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|254782495|sp|B8DJF0|SYL_DESVM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218759128|gb|ACL10027.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 834

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 14/198 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N  N R     L  SYD    + T    ++   +  + +  +KG +Y
Sbjct: 89  IKHGTHPAKWTFSNIDNMRTQLRRLGYSYDWRRELATCTPEYYRWEQQFFLRFFEKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +      +  +      +++V +G   +  +A  Q N  QW      F R++ Y ++LL+
Sbjct: 149 RKQAPQNWCPKCHTVLANEQVIEGLCWRCDSAVEQKNLTQW------FLRITDYAEELLA 202

Query: 179 YYE----SHPEFILPIER 192
             +      PE ++ ++R
Sbjct: 203 DLDKLEAGWPERVVSMQR 220



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS------ANLPLP-KKVFSHGFILHKG 300
           D +  K+W P D ++ G +    H +Y   F+ +       +L  P   + + G +L +G
Sbjct: 525 DPAALKYWMPVDQYIGGVEHAILHLLYSRFFVKALRDCGYMDLDEPFANLLTQGMVLKEG 584

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            K+SKS GNV+DP E+I   G D +R F +
Sbjct: 585 AKMSKSKGNVVDPTEMIARYGADTVRLFCL 614


>gi|184155830|ref|YP_001844170.1| leucyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238692988|sp|B2GDF8|SYL_LACF3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|183227174|dbj|BAG27690.1| leucyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 805

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN  +FRD    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPADFTNQNVDHFRDQIQSLGFSYDWDREVNTTDPNYYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 521 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 580

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D+ GL         +G    V R 
Sbjct: 581 SKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPWDEKGL---------HGSNKWVQRV 631

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      +  +D  +  V ++ ++++ ++ +    + A++Q++  V+E 
Sbjct: 632 WRLLMDDNNHLRDRVSTY--NDGKLTKVYNQTVKKVTDDFERMHFNTAISQLMVFVNEA 688


>gi|317496419|ref|ZP_07954771.1| leucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913434|gb|EFV34928.1| leucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 809

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ A  H+GH       D+L+R+ R +G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  QN   FR     L  SY  D  + TT+  ++   + ++KK+ +KG  Y
Sbjct: 90  LDTGNDPREFTKQNIDTFRRQIKELGFSYDWDREVNTTDPNYYKWTQWIFKKLYEKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ +    DG+     H PV+      +  +++ Y ++LL
Sbjct: 150 VDEVPVNWCPALGTVLSNEEVI----DGKSERGGH-PVERRPMRQWVLKITDYAEQLL 202



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK 299
           D  K K+W P D+++ G +    H +Y   W   L    L +P     +K+F+ G IL +
Sbjct: 514 DPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGL-VPSREPFQKLFNQGMILAE 572

Query: 300 G-----EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           G     EK+SKS GNV++P ++I   G D LR +
Sbjct: 573 GKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVY 606


>gi|283770836|ref|ZP_06343728.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460983|gb|EFC08073.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 805

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|298230202|ref|ZP_06963883.1| leucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256035|ref|ZP_06979621.1| leucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502072|ref|YP_003724012.1| leucine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|298237667|gb|ADI68798.1| leucine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|225858106|ref|YP_002739616.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782515|sp|C1CB31|SYL_STRP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225722073|gb|ACO17927.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|290890338|ref|ZP_06553416.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
 gi|189030331|sp|Q04FL2|SYL_OENOB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|290480023|gb|EFD88669.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
          Length = 810

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 23/193 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 520 DPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLVNQGMILGTN 579

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P E+++  G DALR +         + F       K  + +   GI 
Sbjct: 580 HEKMSKSKGNVVNPDEIVDSYGADALRVY---------EMFMGPLTQSKPWSTESLAGIR 630

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +   D DG+ P     +E+D  +  + ++ ++++ E+      + A++Q++ 
Sbjct: 631 RYLDRVWRIFTSDGDGINPI--IVSENDHKLDKIFNQTVKKVTEDYAAMRFNTAISQMMV 688

Query: 420 LVSEVDRYFDAQK 432
            ++E    F A+K
Sbjct: 689 FINET---FKAEK 698



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ Q  H+GH       D++ARF+R+ G +VL   G D  G    + A
Sbjct: 31  KPKYYVMNMFPYPSGQGLHVGHPESYTATDIMARFNRMRGFNVLQPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F ++N ++F+     L  SY  D  I TT+  ++   + +++++  KG  Y
Sbjct: 91  IKTGHNPADFTNENIKHFKKQVKSLGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGLAY 150

Query: 121 K 121
           +
Sbjct: 151 E 151


>gi|329768427|ref|ZP_08259919.1| leucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836989|gb|EGF86634.1| leucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 809

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 9/179 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+ A  H+GH       D+L+R+ R +G +VL   G D  G    + A
Sbjct: 30  KEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F   N   FR     L  SY  D  + TT+ +++   + ++KK+ +KG  Y
Sbjct: 90  LDTGNDPRDFTKTNIDTFRRQIKELGFSYDWDREVNTTDPKYYKWTQWIFKKLYEKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                  W         N++ +    DG+     H PV+      +  +++ Y +KLL+
Sbjct: 150 VDEVPVNWCPALGTVLSNEEVI----DGKSERGGH-PVERRPMRQWVLKITDYAEKLLA 203



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK 299
           D  K K+W P D+++ G +    H +Y   W   L    L +P     +K+F+ G IL +
Sbjct: 514 DPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGL-VPSREPFQKLFNQGMILAE 572

Query: 300 G-----EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           G     EK+SKS GNV++P ++I   G D LR +
Sbjct: 573 GKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVY 606


>gi|330813622|ref|YP_004357861.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486717|gb|AEA81122.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 917

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPAD+++ G D  R  FH+    +       P  K +  HGF++  KG+K+SKSLGNV+ 
Sbjct: 553 WPADMYLEGSDQHRGWFHSSLLQSCGTRGQAPY-KSILCHGFVVDGKGQKMSKSLGNVVS 611

Query: 313 PIEVIEEVGVDALRYFLV 330
           P EVI++ G D LR +++
Sbjct: 612 PDEVIKKYGADILRLWVI 629



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 29/56 (51%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++EK  +     Y N   HIG A   I+ DV+ R+ +L G + ++  G D HG  I
Sbjct: 45  DKEKFILHDGPPYANGNIHIGTALNKILKDVIIRYQQLLGKNAVYVPGWDCHGLPI 100


>gi|323495447|ref|ZP_08100524.1| leucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310370|gb|EGA63557.1| leucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 857

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           ++    PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L      +NP+
Sbjct: 260 I-AAGHPLAAVAAENNPE 276


>gi|49484005|ref|YP_041229.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749408|sp|Q6GFU3|SYL_STAAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49242134|emb|CAG40834.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|315195672|gb|EFU26059.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 804

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 574 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 634 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 677 ISQLMVFINECYKVDEVYKPY 697



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|262283432|ref|ZP_06061198.1| leucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260923|gb|EEY79623.1| leucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F   N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAGNIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 203 LLNDLEELDWPESIKDMQR 221


>gi|238758029|ref|ZP_04619210.1| Leucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238703783|gb|EEP96319.1| Leucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 860

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTAAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|282904333|ref|ZP_06312221.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906158|ref|ZP_06314013.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909075|ref|ZP_06316893.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911383|ref|ZP_06319185.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282919520|ref|ZP_06327255.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|283958511|ref|ZP_06375962.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428334|ref|ZP_06820963.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590702|ref|ZP_06949340.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|282317330|gb|EFB47704.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282325078|gb|EFB55388.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327339|gb|EFB57634.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331450|gb|EFB60964.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595951|gb|EFC00915.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790660|gb|EFC29477.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295127734|gb|EFG57371.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575588|gb|EFH94304.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437784|gb|ADQ76855.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 805

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|254509296|ref|ZP_05121388.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219547784|gb|EED24817.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 838

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           ++    PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L      +NP+
Sbjct: 260 I-AAGHPLAAVAAENNPE 276


>gi|15924750|ref|NP_372284.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927335|ref|NP_374868.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|156980077|ref|YP_001442336.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006546|ref|ZP_05145147.2| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|296276048|ref|ZP_06858555.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039680|sp|P67513|SYL_STAAN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042038|sp|P67512|SYL_STAAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231647|sp|A7X3J9|SYL_STAA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13701554|dbj|BAB42847.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247532|dbj|BAB57922.1| leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722212|dbj|BAF78629.1| leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|285817440|gb|ADC37927.1| Leucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|312830136|emb|CBX34978.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130602|gb|EFT86588.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
          Length = 804

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 574 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 634 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 677 ISQLMVFINECYKVDEVYKPY 697



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|325187731|emb|CCA22276.1| PREDICTED: similar to isoleucyltRNA synthetase puta [Albugo
           laibachii Nc14]
          Length = 1175

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 16/246 (6%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
            +N +  +A F PAD    G D  R    ++   ++S  L   P  K +  +G +L + G
Sbjct: 552 FENQEKFEAGF-PADFIAEGLDQTR--GWFYTLMVISTALFDKPAFKNLIVNGLVLAEDG 608

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSL N  DP  +IEE G DALR +L+       +    ++   K V  +L     N
Sbjct: 609 RKMSKSLRNFTDPTALIEEYGADALRLYLINSPVVRAEPLKFQEAGVKGVIRELFLPWYN 668

Query: 361 LVS--RSVSMILKDYDGMIPTPG---AFTES---DESILSVCSRVLQEIRENMQNQLIHR 412
                   +M L+     + TP    AF      D  I++    +++ +R+ M    ++ 
Sbjct: 669 AARFFAQNAMRLEKVTNKVFTPTREEAFQSDNVMDSWIIAALHNLIKFVRDEMAAFRLYT 728

Query: 413 ALAQVISLVSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            + +++  + ++ + Y    +P     T  + A T L    EV+  L+ L+  F P LA 
Sbjct: 729 VVPRLVEFIDQLTKWYVRLNRPRLKGATGSEAAQTALSALYEVLYALSKLMAPFTPFLAE 788

Query: 472 KIFDIL 477
            ++  L
Sbjct: 789 FMYQFL 794


>gi|322833894|ref|YP_004213921.1| leucyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169095|gb|ADW74794.1| leucyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 894

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|319409376|emb|CBI83020.1| Leucyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 874

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 8/181 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  KV+  QN    R     L +S D   +F  T +  ++   ++++    +KG I 
Sbjct: 93  QNKVHPKVWTYQNIAVMRGQLKQLGLSLDWSREFA-TCDVEYYHRQQMIFLDFYEKGLIA 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    DG+ + +    V+  E   +FF++S + + LL+  
Sbjct: 152 RKVAKVNWDPVDHTVLANEQV---VDGRGWRS-GALVEQRELTQWFFKISDFSEDLLAGL 207

Query: 181 E 181
           E
Sbjct: 208 E 208



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 7/129 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N+IDP ++I   G D +R+F++ +    +D  + + G++          I  
Sbjct: 631 EKMSKSKKNIIDPDDIIASYGADTVRWFMLSDSPPERDVIWTEAGIEG--AHRFVQRIWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V+ S S +LK+ +   P  G   E+ E +  V  R L  + ++++    +RA+A++  L
Sbjct: 689 CVALSAS-VLKEVE---PRTGRHGEALE-LSKVAHRTLCAVEDDLEKLAFNRAVARLYEL 743

Query: 421 VSEVDRYFD 429
           ++ +  + +
Sbjct: 744 LNTMTPFLN 752


>gi|307126472|ref|YP_003878503.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483534|gb|ADM90403.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|296126917|ref|YP_003634169.1| isoleucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018733|gb|ADG71970.1| isoleucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 923

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 8/109 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  +         + DG     +P D+++ G D  R  F A  WP+  +   +
Sbjct: 529 ILDVWFDSGVSSFAAQKTNKDLDG----VFPVDIYLEGGDQYRGWFQAAIWPSMAIRG-I 583

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K++ +HG+ L  +G  + KS GNV+ P+EVI++ G D LR + + E
Sbjct: 584 PPYKELVTHGWTLDEQGRAMHKSAGNVVSPLEVIDKYGADILRLWCISE 632



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-----GVTT 69
           Y N   HIG +   II D++ R+    G D  +  G D HG  I    Q +       T+
Sbjct: 58  YANGDIHIGTSLNKIIKDIIVRYKSAKGFDSPYVPGWDCHGMPIELKVQESLGDKYKETS 117

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKG 117
           K  + +  R +      +DI   +F R            T    +      ++ K+ +KG
Sbjct: 118 KFIMRKKCRAY--AQKYIDIQRKEFKRLGVMGDWENPYLTMSPEYESEIVEVFAKLVEKG 175

Query: 118 DIYKG 122
            IYKG
Sbjct: 176 YIYKG 180


>gi|221231157|ref|YP_002510309.1| leucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225853856|ref|YP_002735368.1| leucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782516|sp|B8ZKS5|SYL_STRPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782839|sp|C1CC47|SYL_STRZJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|220673617|emb|CAR68104.1| leucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722605|gb|ACO18458.1| leucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|255068071|ref|ZP_05319926.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047669|gb|EET43133.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 878

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|160947731|ref|ZP_02094898.1| hypothetical protein PEPMIC_01666 [Parvimonas micra ATCC 33270]
 gi|158446865|gb|EDP23860.1| hypothetical protein PEPMIC_01666 [Parvimonas micra ATCC 33270]
          Length = 809

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++EK Y      YP+ Q  H+GH       DV++R  RL+G +VLFT G D  G    
Sbjct: 33  INDKEKFYPLIEFPYPSGQGLHVGHPRPYTAMDVVSRKRRLEGQNVLFTMGWDAFGLPTE 92

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
             A    +  ++    N  NF+     +  S+  D  I TT+  ++   + ++ K+ +KG
Sbjct: 93  NYAMKNKIHPEIVTKNNIANFKKQLKRIGFSFDWDREINTTDPEYYKWTQWIFMKMFEKG 152

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDK 175
             YK      +    +   +++EV  G   +  +   + V  QWM       +++ Y D+
Sbjct: 153 LAYKMEMPINFCTSCKVGLSNEEVVGGCCERCGSEVIHKVKNQWM------LKITEYADR 206

Query: 176 LL 177
           L+
Sbjct: 207 LI 208



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 42/211 (19%)

Query: 270 FHAIYWPAFLLSANLPLPKKVF----SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
            ++ +W  FL    +   K+ +    SHG IL   GEK+SKS GNV++P E+I++ G DA
Sbjct: 550 LYSRFWHKFLYDIGVVNTKEPYLKRTSHGMILGENGEKMSKSRGNVVNPDEMIDKYGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR +   E+  G    +++       +A  ++G  N   + +  + K    +     +  
Sbjct: 610 LRCY---EMFLGD---FER-------SASWSDGGINGCRKFLDRVWK----LQEITNSSE 652

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E  +S+     + ++++ E+ ++   + A+A +++L++E                     
Sbjct: 653 EMTKSLEKSIHKTIKKVSEDFESLKFNTAIAALMTLINEF-------------------- 692

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +V  ++ E +R   ILL    P +  +I++
Sbjct: 693 YSVKEISREDLRIFLILLNPVSPHITEEIWE 723


>gi|34395208|dbj|BAC83606.1| putative valyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 945

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 19/151 (12%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +S  + L+ +++ +   ++I  DP  ++  W  +     +T G+ D        F+PA 
Sbjct: 464 ARSAEEALAKAQEKYGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSSEDFKHFYPAT 522

Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL------HKGEKISKSL 307
           +   G DIL F    W A ++      +  +P    V+ HG I        +G K+SK+L
Sbjct: 523 VLETGHDILFF----WVARMVMMGIEFTGTVPF-SYVYLHGLIRDSEQVNFQGRKMSKTL 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP++ I+E G DALR+ L    A G+D
Sbjct: 578 GNVIDPLDTIKEYGTDALRFTLSMGTA-GQD 607


>gi|167751178|ref|ZP_02423305.1| hypothetical protein EUBSIR_02164 [Eubacterium siraeum DSM 15702]
 gi|167655893|gb|EDS00023.1| hypothetical protein EUBSIR_02164 [Eubacterium siraeum DSM 15702]
          Length = 801

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 7/182 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       +V++R  RL G +VLF  G D +G      A
Sbjct: 33  KPKFYALVEFPYPSGAGMHVGHIKAYSGLEVVSRKRRLQGYNVLFPIGFDAYGLPTENTA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  +   D N   F      +  S+D    I TTE+R++   + ++ K+ + G ++
Sbjct: 93  IKTGVHPRKVTDNNIVKFTSQLKRVGFSFDWSRVIDTTEERYYKWTQWIFLKMFEHGLVF 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y    +   ++++    + G + +  H+ +    +E ++ R++ Y DKLL   
Sbjct: 153 RDKTLVNYCPSCKVVLSNED----SQGGHCDICHSEIVQKTKEVWYLRITEYADKLLQGL 208

Query: 181 ES 182
           E+
Sbjct: 209 ET 210



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 56/238 (23%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLS-ANLPLPK---KVFSHGFILHK-GEKIS 304
           K+W P D +  G + +  H IY   W  FL     +P P+   K  + G IL   GEK+S
Sbjct: 525 KYWLPVDWYNGGMEHVTRHMIYSRFWHKFLYDIGEVPTPEPYAKRTAQGLILGPDGEKMS 584

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLV 362
           KS GNVIDP +V++  G D LR +++      +   ++   +K  KR   D    + N++
Sbjct: 585 KSRGNVIDPNDVVDVYGADVLRVYVLFMGDYEQAAPWNDSSMKGCKRF-LDRVWNLQNML 643

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R                    E  + + +   + ++++ E+++    + A+A ++SL++
Sbjct: 644 VRG------------------DEYSDELRTSMHKTIKKVSEDIEKMRFNTAIAAMMSLIN 685

Query: 423 EV---DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E+    +  DA+                       ++ L ILL  F P +  ++++ L
Sbjct: 686 EITANGKINDAE-----------------------MKSLLILLNPFAPHITEEMYNSL 720


>gi|163741358|ref|ZP_02148749.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385092|gb|EDQ09470.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 1027

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 11/104 (10%)

Query: 235 LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKK 289
            ++ L   G L  P+ ++  +K++P    V G+DIL F     +     +L  +LP+ ++
Sbjct: 593 FSSGLWPIGTLGWPEWTEETSKYFPTSTLVTGQDILFFWVARMMMMQLAVLDQDLPVEQR 652

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
                V+ HG +   KG+K+SKS GNV+DP+E+I+E G DALR+
Sbjct: 653 IPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEYGADALRF 696



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 14/79 (17%)

Query: 3  EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          +R + Y S  I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD        
Sbjct: 33 KRSETY-SVMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-------- 83

Query: 61 AAQNAGVTTKVFVDQNSRN 79
             +AG+ T++ V++   N
Sbjct: 84 ---HAGIATQMVVERELAN 99


>gi|301793524|emb|CBW35899.1| leucyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|148983657|ref|ZP_01816976.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923804|gb|EDK74916.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799401|emb|CBW31937.1| leucyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|148268236|ref|YP_001247179.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394304|ref|YP_001316979.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794141|ref|ZP_05643120.1| leucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415845|ref|ZP_05682116.1| leucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420674|ref|ZP_05683613.1| leucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438324|ref|ZP_05689608.1| leucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443782|ref|ZP_05692121.1| leucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445993|ref|ZP_05694169.1| leucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448279|ref|ZP_05696406.1| leucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454193|ref|ZP_05702164.1| leucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203396|ref|YP_003282665.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893252|ref|ZP_06301486.1| leucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927887|ref|ZP_06335498.1| leucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295406069|ref|ZP_06815877.1| leucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297245006|ref|ZP_06928883.1| leucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|189083152|sp|A6U2M4|SYL_STAA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083153|sp|A5ITT0|SYL_STAA9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147741305|gb|ABQ49603.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946756|gb|ABR52692.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788113|gb|EEV26453.1| leucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839438|gb|EEV63911.1| leucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843278|gb|EEV67688.1| leucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848368|gb|EEV72359.1| leucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851188|gb|EEV75131.1| leucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855235|gb|EEV78174.1| leucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858518|gb|EEV81394.1| leucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863645|gb|EEV86402.1| leucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075686|gb|ACY11659.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590397|gb|EFB95476.1| leucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764570|gb|EFC04696.1| leucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|294969066|gb|EFG45087.1| leucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297178086|gb|EFH37334.1| leucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|329727097|gb|EGG63553.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 805

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|71277791|ref|YP_267925.1| isoleucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|84029510|sp|Q486U0|SYI_COLP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71143531|gb|AAZ24004.1| isoleucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 953

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 19/141 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           IK+PD     + VW D+ T + +     D  DG       ADL++ G D  R  F +   
Sbjct: 530 IKVPD----TLDVWFDSGTTHESVIKARDEFDGI------ADLYLEGSDQHRGWFMSSMI 579

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL----- 329
            +  ++   P  K+V +HGF++  KG K+SKSLGNVI P E+   +G D LR +      
Sbjct: 580 SSVAMNGAAPY-KQVLTHGFVVDAKGHKMSKSLGNVITPKEITNNLGADILRLWTASVNY 638

Query: 330 VREIACGKDGFYDKDGLKKRV 350
            +EI  G + F  +    +R+
Sbjct: 639 TQEITAGDEIFKRQADAYRRI 659


>gi|49486583|ref|YP_043804.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|56749379|sp|Q6G8G9|SYL_STAAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49245026|emb|CAG43487.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 806

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 516 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 575

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 576 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 635

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 636 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 678

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 679 ISQLMVFINECYKVDEVYKPY 699



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|332004946|gb|AED92329.1| valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 974

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 17/147 (11%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            KS  + L  + + +   ++I  DP  ++  W  +     +T G+ D        F+P +
Sbjct: 495 AKSAEEALEKALEKYGKDVEIYQDPD-VLDTWFSSSLWPFSTLGWPDVAAKDFNNFYPTN 553

Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +   G DIL F    W A ++      +  +P    V+ HG I   +G K+SKSLGNVID
Sbjct: 554 MLETGHDILFF----WVARMVMMGIEFTGTVPF-SHVYLHGLIRDSQGRKMSKSLGNVID 608

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDG 339
           P++ I++ G DALR+     IA G  G
Sbjct: 609 PLDTIKDFGTDALRF----TIALGTAG 631


>gi|309791315|ref|ZP_07685838.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226625|gb|EFO80330.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 905

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 52/350 (14%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           E +F +     D  L+        I+P ER  +V       ++D  +SR+ + WG +IP 
Sbjct: 386 EQWFVKTRPLADLALAAVREGRTKIIP-ERFEKVYYHWMENIEDWCISRQLW-WGHRIPV 443

Query: 222 ----------------------DDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPA 258
                                  DP  ++  W  +     +T G+ +  PD   A ++P 
Sbjct: 444 WYMPDGTMLVLGPDETPPEGAVQDPD-VLDTWFSSGLWPFSTLGWPEQTPD--LATYYPT 500

Query: 259 DLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
            +   G DI+ F    W A +      L+   P    ++ HG +  + G K+SKS GNV+
Sbjct: 501 SVMETGYDIIFF----WVARMMMLGCYLTGTEPF-HTIYLHGLVRDEHGRKMSKSYGNVV 555

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           +P+EV++  G DALRY L      G+D   +   ++   N   AN I N+    +S  ++
Sbjct: 556 NPLEVMDAQGTDALRYTLATSGTPGQDLNLNPQRIEAARN--FANKIWNITRFVISKGVR 613

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429
             D   P     + +D  ILS   R+  +    ++      A  Q+   +     D Y +
Sbjct: 614 SSDANNPL-TMLSLADRWILSRYHRLCLDSDRLLEGYNFGEAGRQMHDFLWGEFADWYVE 672

Query: 430 AQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K  +L+ +   +A+T  VLY  +E   +   LL  ++P +  +++  L
Sbjct: 673 IAKV-QLEGSAEQQATTRAVLYTVLEGTLR---LLHPYIPFITEEVWQYL 718



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 46/146 (31%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           +I  PN   + H+GHA  + I D++ R+ R+ G   L+  GTD           +AG+ T
Sbjct: 51  SIPPPNVTGELHLGHAMFVTIEDLMIRWRRMQGYQTLWVPGTD-----------HAGIAT 99

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTE--------------KRHHDTC--------- 106
           +  V++  R+  +      +  ++F+R T               +R   +C         
Sbjct: 100 QTLVEKLLRS--EGTSREQVGREEFLRRTWEWKAKYGGEIQNQLRRLGASCDWERERFTL 157

Query: 107 --------RILWKKISDKGDIYKGCY 124
                   +  +K++ D G IYKG Y
Sbjct: 158 DEGLSRSVQTAFKRLYDDGLIYKGTY 183


>gi|255321491|ref|ZP_05362649.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255301347|gb|EET80606.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 823

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 18/180 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 36  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKHGYNVLHPIGFDSFGMPAENAAIKH 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS--------DKG 117
            +  K++  +N    R   + L +S+      ++KR   T   L+ K          +KG
Sbjct: 96  KIHPKIWTYENIDYMRGELETLGLSF------SKKREFATSDPLYTKFEQEFFIKMYEKG 149

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +Y+      +   D+    +++V  G   +  NA    V   E  GY+ +++ Y  +LL
Sbjct: 150 LVYRKSAVVNWCEYDQTVLANEQVEDGCCWRCGNA----VIQRELPGYYLKITDYAQELL 205



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 30/43 (69%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++ + G +L  G+K+SKS GNV+DP ++I + G D  R F++
Sbjct: 577 ERLLTQGMVLKDGKKMSKSKGNVVDPDDIIHKYGADTARLFIL 619


>gi|329733103|gb|EGG69440.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 805

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|226313405|ref|YP_002773299.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782371|sp|C0ZG86|SYI_BREBN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226096353|dbj|BAH44795.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 925

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 40/266 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++             +   WPAD+++ G D  R  F++       +    
Sbjct: 524 IMDVWFDSGSSHQAVLR-------ERGIAWPADMYLEGSDQYRGWFNSSLSTGVAVYGTA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V SHGF L  +G K+SKSLGNVI P +VI+++G D LR ++           Y  
Sbjct: 577 PY-KSVLSHGFALDGEGRKMSKSLGNVIVPQQVIDKMGADILRLWVASVD-------YQA 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCS 395
           D    R++  + N I  +   +  +   +L + DG  P           E D  +L+  +
Sbjct: 629 D---VRISDAILNQIAEVYRKIRNTFRFLLGNLDGFNPATDRVAYEELGELDRYVLAKAA 685

Query: 396 RVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPDR-----ASTVL 448
           +V +  R+       H     V    ++     Y D  K   L    PD      A TV+
Sbjct: 686 KVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDICKD-RLYVEAPDSLKRRAAQTVM 744

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
           Y   + +  L  L+   +P  A++++
Sbjct: 745 Y---DCLLSLVKLVAPLLPHTADEVW 767



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 19/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   HIGHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KDRPSFVLHDGPPYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDT 105
             NA    +  ++ N  +FR   +    SY D  R   KR                 ++ 
Sbjct: 105 IINAQGLDRRSIEVN--DFRQRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEA 162

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++ KG IYKG    ++S   E    D E+
Sbjct: 163 NQIRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEI 199


>gi|167835732|ref|ZP_02462615.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 945

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P  G + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYVKDALPA-GQWLEIDRYAVAFAAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY VT 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASNARRS----AQTALYHVTQ 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A ++F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|291531740|emb|CBK97325.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Eubacterium siraeum 70/3]
          Length = 801

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 7/182 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       +V++R  RL G +VLF  G D +G      A
Sbjct: 33  KPKFYALVEFPYPSGAGMHVGHIKAYSGLEVVSRKRRLQGYNVLFPIGFDAYGLPTENTA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  +   D N   F      +  S+D    I TTE+R++   + ++ K+ + G ++
Sbjct: 93  IKTGVHPRKVTDNNIVKFTSQLKRVGFSFDWSRVIDTTEERYYKWTQWIFLKMFEHGLVF 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y    +   ++++    + G + +  H+ +    +E ++ R++ Y DKLL   
Sbjct: 153 RDKTLVNYCPSCKVVLSNED----SQGGHCDICHSEIVQKTKEVWYLRITEYADKLLQGL 208

Query: 181 ES 182
           E+
Sbjct: 209 ET 210



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 56/238 (23%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLS-ANLPLPK---KVFSHGFILHK-GEKIS 304
           K+W P D +  G + +  H IY   W  FL     +P P+   K  + G IL   GEK+S
Sbjct: 525 KYWLPVDWYNGGMEHVTRHMIYSRFWHKFLYDIGEVPTPEPYAKRTAQGLILGPDGEKMS 584

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLV 362
           KS GNVIDP +V++  G D LR +++      +   ++   +K  KR   D    + N++
Sbjct: 585 KSRGNVIDPNDVVDVYGADVLRVYVLFMGDYEQAAPWNDSSMKGCKRF-LDRVWNLQNML 643

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R                    E  + + +   + ++++ E+++    + A+A ++SL++
Sbjct: 644 VRG------------------DEYSDELRTSMHKTIKKVSEDIEKMRFNTAIAAMMSLIN 685

Query: 423 EV---DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E+    +  DA+                       ++ L ILL  F P +  ++++ L
Sbjct: 686 EITANGKINDAE-----------------------MKSLLILLNPFAPHITEEMYNSL 720


>gi|260576671|ref|ZP_05844658.1| isoleucyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021156|gb|EEW24465.1| isoleucyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 984

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 50/212 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSGLK----DLSLS 210
           VQW  + G        +++L S  E+ P+++L  +R   V    FVK G K    D  L 
Sbjct: 494 VQWTPQTG--------RNRLYSMIEARPDWVLSRQRAWGVPLTCFVKKGAKPTDPDFLLR 545

Query: 211 RKTFD--------------W-----------GIKIPDDPQYI---MYVWIDALTNYLTTT 242
               +              W           GI  P D + I   + VW D+ + +    
Sbjct: 546 NADLNARIVAAFEAEGADVWYVQGFKEKMLHGIANPSDYEQIFDVLDVWFDSGSTHAFV- 604

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
              D  DGS      ADL++ G D  R  FH+    A       P  + V +HGF L  K
Sbjct: 605 -LRDRADGSVDGL--ADLYLEGTDQHRGWFHSSMLQACGTKGRAPY-RGVLTHGFTLDEK 660

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           G K+SKSLGN I P E+I+E G D LR ++ +
Sbjct: 661 GMKMSKSLGNTIGPEEIIKEYGADILRLWVAQ 692


>gi|330873573|gb|EGH07722.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 868

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              S  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGSVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|323439586|gb|EGA97306.1| leucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442033|gb|EGA99669.1| leucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 805

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|323499960|ref|ZP_08104918.1| leucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323314977|gb|EGA68030.1| leucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 857

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           ++    PE +  ++R    R+E +   F   G +DL +           PD    + YV 
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEGVELKFEVKGQQDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNPD 249
           I A  + L      +NP+
Sbjct: 260 I-AAGHPLAAVAAENNPE 276


>gi|315612362|ref|ZP_07887275.1| leucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315343|gb|EFU63382.1| leucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILGRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|227903700|ref|ZP_04021505.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868587|gb|EEJ76008.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 927

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 523 ILDVWFDSGSSW---SGVMEKRDGLH---YPADLYLEGSDQYRGWFNSSLITSVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+ +G + +R ++ +
Sbjct: 577 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQ 623



 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     G+  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGIDRKTM 115


>gi|224438465|ref|ZP_03659389.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144898|ref|ZP_07807091.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129929|gb|EFR47546.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 826

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 21/223 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K YI +   YP+   H+GH     I D LAR +R  G +VL   G D  G     AA 
Sbjct: 35  KQKKYILSMFPYPSGAIHMGHVRNYCIGDALARHYRKSGYNVLHPMGWDAFGMPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 K +   N    R     L +S+  +    T++  H    +  + K+ +KG IY+
Sbjct: 95  KHKSHPKTWTYSNIDTMRKELVTLGLSFSKEQEFATSDPIHTRFEQEFFIKMWEKGLIYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
                 Y   D+    +++V    +G+ +      VQ +  + Y+ +++AY D+LL+   
Sbjct: 155 KEAYLNYCPNDKTILANEQVI---EGKCWRCDTPVVQKLMFQ-YYIKITAYADELLTGLD 210

Query: 179 YYESH-PEFILPIER-----------RNEVISFVKSGLKDLSL 209
             E H P+ +L ++R           + E+ S ++S +KDL +
Sbjct: 211 ELEGHWPQQVLHMQRNWIGKSKGLSFKLELDSTLESSIKDLEV 253



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + + G +L  G K+SKS GNV++P ++I   G D  R F++
Sbjct: 578 KNLLTQGMVLKNGAKMSKSKGNVVNPNDIITRYGADTARLFIL 620


>gi|83594960|ref|YP_428712.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123739388|sp|Q2RN70|SYL_RHORT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83577874|gb|ABC24425.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 862

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 16/184 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     A
Sbjct: 32  RTRPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARFKRAQGFNVLHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV    +  QN    R+    + +S D        R   TC   + +   K  ++ 
Sbjct: 92  AIQRGVHPATWTRQNIAIMREQFKPMGLSID------WSREVSTCEPAYYRHEQK--MFL 143

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
                  + R E++ N D V           DG+ + +   PV+  +   +F R++ Y +
Sbjct: 144 DFLKAGLAYRRESWVNWDPVEHTVLANEQVIDGKGWRSG-APVERRKLSQWFLRITRYAE 202

Query: 175 KLLS 178
            LL+
Sbjct: 203 DLLA 206


>gi|21283430|ref|NP_646518.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|253732411|ref|ZP_04866576.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734458|ref|ZP_04868623.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297207527|ref|ZP_06923963.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911611|ref|ZP_07129055.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|32171568|sp|Q8NW17|SYL_STAAW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21204871|dbj|BAB95566.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|253723801|gb|EES92530.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727512|gb|EES96241.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|296887863|gb|EFH26760.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300887032|gb|EFK82233.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 807

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 517 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 576

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 577 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 636

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 637 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 679

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 680 ISQLMVFINECYKVDEVYKPY 700



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|226943041|ref|YP_002798114.1| leucyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511540|sp|C1DMV9|SYL_AZOVD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226717968|gb|ACO77139.1| Leucyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 870

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGRNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L +  D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNRVAPAKWTYENIAYMKSQLKSLGLGIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++AY ++LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYFRITAYAEELLQ 204

Query: 179 YYESHP 184
             +S P
Sbjct: 205 SLDSLP 210


>gi|225619103|ref|YP_002720329.1| valyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225213922|gb|ACN82656.1| valyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 884

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 24/235 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P    V G DIL F    W A ++ A      ++P  K V+ +G I  K G K+SKSL
Sbjct: 478 FYPTTALVTGYDILFF----WVARMIMAGTHFMNDVPF-KDVYLNGLIRDKIGRKMSKSL 532

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           GN IDPIE+I+E G DA R+ L    +  G+D + D++  K  +    AN I N      
Sbjct: 533 GNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFK--MGGKFANKIYNSAKYIF 590

Query: 367 SMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             I  D +  I    ++T    D+ ILS   + ++   + ++      A   +       
Sbjct: 591 GNI--DDNANIKDLDSYTLENKDKWILSRLQKAIESTTQKLKEYRFDEASQTIYKFYWNE 648

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K ++LK  +  +    + V + V+ +   ++  F+P +  +I+  L
Sbjct: 649 FCDWYIEISK-FDLK--DESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYSNL 700


>gi|224081316|ref|XP_002306367.1| predicted protein [Populus trichocarpa]
 gi|222855816|gb|EEE93363.1| predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 25/188 (13%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           RNE  +  ++  K    S K FD    I  DP  ++  W  +    L+  G+ D+ D  +
Sbjct: 534 RNEEEALAEASQK---FSGKKFD----ISQDPD-VLDTWFSSGLFPLSVLGWPDDTDDLR 585

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISK 305
             F+P  +   G DIL     +W A +      L  ++P  +KVF H  +    G K+SK
Sbjct: 586 T-FYPTSVLETGHDIL----FFWVARMVMLGIQLGGDVPF-RKVFLHPMVRDAHGRKMSK 639

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNVIDP+EVI+ + ++ L   L       K+    K G K+    D  NGI    + +
Sbjct: 640 SLGNVIDPLEVIDGISLEGLHKRLEEGNLDQKELVVAKAGQKQ----DFPNGIAECGTDA 695

Query: 366 VSMILKDY 373
           +   L  Y
Sbjct: 696 LRFALVSY 703


>gi|192291231|ref|YP_001991836.1| valyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192284980|gb|ACF01361.1| valyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 957

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +    +++P ++ V G DI+ F    W A ++   L
Sbjct: 495 VLDTWFSSALWPFSTLGW---PDETPELDRYYPTNVLVTGFDIIFF----WVARMMMMGL 547

Query: 285 ------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 P P  V+ H  +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+
Sbjct: 548 HFMDDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLNLIDEYGADALRFTLAAMAAQGR 606

Query: 338 D 338
           D
Sbjct: 607 D 607



 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 13/77 (16%)

Query: 2  KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          + R+ +  S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD       
Sbjct: 31 ERRDAVPYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD------- 83

Query: 60 KAAQNAGVTTKVFVDQN 76
              +AG+ T++ V++ 
Sbjct: 84 ----HAGIATQMVVERQ 96


>gi|124025701|ref|YP_001014817.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|189083137|sp|A2C242|SYL_PROM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123960769|gb|ABM75552.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 862

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 5/178 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +    Y  +   YP+   H+GH    +I DVLAR+ R+ GL+VL   G D  G     
Sbjct: 38  VNKENTFYALSMFPYPSGSLHMGHVRNYVITDVLARYKRMKGLNVLHPMGWDSFGLPAEN 97

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA     +   + D+N    +D  D L +S D    + T ++ ++   + ++ ++     
Sbjct: 98  AAIERETSPSTWTDKNISQMKDQLDRLGLSIDWSKEVTTCKEDYYKWTQYIFNQLHKNNL 157

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+   +  +   D+    +++V   A+G+ + +    V+  E   +F R++++ + L
Sbjct: 158 AYQKKATVNWDPIDQTVLANEQV--DAEGKSWRSGAK-VEKKELNQWFLRITSFAEDL 212


>gi|159899374|ref|YP_001545621.1| valyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892413|gb|ABX05493.1| valyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 921

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 23/177 (12%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK 299
           ++NPD  +  F+P  L   G DIL F    W A ++   L L  K     V+ HG +  +
Sbjct: 497 VENPDFKQ--FYPTTLLETGYDILFF----WVARMMMLGLYLTGKEPFEWVYLHGLVRDE 550

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN +DP+++IE+ G DALR+        G+D       L        AN I
Sbjct: 551 HGRKMSKSLGNQVDPMDLIEQYGTDALRFTFATSSTPGQDFALQPTRLDS--ARSFANKI 608

Query: 359 GNLVSRSVSMILKDY--------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            N  +R V   L D         D       A+T +D  ILS  +R+  ++   M +
Sbjct: 609 WN-ATRFVISKLGDLPRTAESKVDAERLNAQAYTVADRWILSRFNRLAGDVERLMNS 664


>gi|330833694|ref|YP_004402519.1| leucyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307917|gb|AEB82333.1| leucyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 833

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  E    PE I  ++R
Sbjct: 205 NDLEEVDWPESIKDMQR 221


>gi|42567891|ref|NP_568337.3| EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA
           ligase/ nucleotide binding / valine-tRNA ligase
           [Arabidopsis thaliana]
          Length = 970

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 17/147 (11%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            KS  + L  + + +   ++I  DP  ++  W  +     +T G+ D        F+P +
Sbjct: 491 AKSAEEALEKALEKYGKDVEIYQDPD-VLDTWFSSSLWPFSTLGWPDVAAKDFNNFYPTN 549

Query: 260 LHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +   G DIL F    W A ++      +  +P    V+ HG I   +G K+SKSLGNVID
Sbjct: 550 MLETGHDILFF----WVARMVMMGIEFTGTVPF-SHVYLHGLIRDSQGRKMSKSLGNVID 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDG 339
           P++ I++ G DALR+     IA G  G
Sbjct: 605 PLDTIKDFGTDALRF----TIALGTAG 627


>gi|58337125|ref|YP_193710.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311485|sp|Q5FKU5|SYI_LACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58254442|gb|AAV42679.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 927

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 523 ILDVWFDSGSSW---SGVMEKRDGLH---YPADLYLEGSDQYRGWFNSSLITSVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+ +G + +R ++ +
Sbjct: 577 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQ 623



 Score = 36.6 bits (83), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     G+  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGIDRKTM 115


>gi|148544519|ref|YP_001271889.1| leucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153883|ref|YP_001842224.1| leucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363053|ref|ZP_03847189.1| leucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682840|ref|ZP_08162356.1| leucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980078|sp|A5VL28|SYL_LACRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229470716|sp|B2G8G2|SYL_LACRJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148531553|gb|ABQ83552.1| leucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225227|dbj|BAG25744.1| leucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071874|gb|EEI10161.1| leucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977190|gb|EGC14141.1| leucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 806

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  + TT+ + +   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKFYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 522 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 581

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D+ GL         +G    V R 
Sbjct: 582 SKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPWDEKGL---------HGANKWVQRV 632

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      F  +D  +  V ++ ++++ E+ +    + A++Q++  V+E 
Sbjct: 633 WRLLMDDNNHLRDRVSTF--NDGKLTKVYNQTVKKVTEDYERMHFNTAISQLMVFVNEA 689


>gi|269792560|ref|YP_003317464.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100195|gb|ACZ19182.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 883

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 63/316 (19%)

Query: 204 LKDLSLSRKTFDWGIKIPD-------------DPQY--------------IMYVWIDALT 236
           ++D  +SR+ + WG +IP              DP +              ++  W  +  
Sbjct: 400 IRDWCISRQLW-WGHRIPAWYCSCGHVIVDEVDPTHCPECGSSNLVQDEDVLDTWFSSAL 458

Query: 237 NYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
              +T G+   P+ +K    F+P  L V G DI+     +W A ++   L     V  H 
Sbjct: 459 WPFSTMGW---PEDTKELRSFYPTGLLVTGFDII----FFWVARMIMMGLEFMGDVPFHH 511

Query: 295 FILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
             +H      +G+K+SKS GNVIDP+++IE+ G DALR  L      G+D          
Sbjct: 512 VYIHALVRDERGQKMSKSKGNVIDPLDLIEKYGADALRMTLAALTVQGRDICLSAS---- 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIREN 404
               +      N +  +    L + DG+ P      ++    D  IL    R L +++  
Sbjct: 568 --RVETYRFFLNKLWNASRFALMNLDGVDPGSPIDLKNLRIHDRWIL----RRLDQVKAQ 621

Query: 405 MQNQLIHRALAQVISLV-----SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + + L      +   L+     SE+ D Y +  KP         R S    V +EV R L
Sbjct: 622 LADLLDGYFFGESARLLYDFTWSELCDWYLEMAKPALRGDEGEPRRSATQRVLLEVFRDL 681

Query: 459 AILLQAFVPKLANKIF 474
             ++  F+P +  +++
Sbjct: 682 LRMMHPFIPFVTEELW 697


>gi|156546787|ref|XP_001605772.1| PREDICTED: similar to leucyl-tRNA synthetase [Nasonia vitripennis]
          Length = 965

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 4/143 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+ +   YP+   H+GH     I+D +ARFHR++G +V+   G D  G     A
Sbjct: 145 ESKEKYYVLSMFPYPSGSLHMGHVRVYTISDSVARFHRMNGKNVIHPMGWDAFGLPAENA 204

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDI 119
           A+   V    +   N  N R+    L  ++D      T +  ++   + L+ K+ + G +
Sbjct: 205 ARERQVDPAKWTQLNIENMREQLLRLGCTFDTHSEFATCDPEYYRWTQELFLKLYENGLL 264

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEV 141
           Y +  Y  W  + D+    D++V
Sbjct: 265 YQRETYVNWDPI-DQTVLADEQV 286


>gi|39935649|ref|NP_947925.1| valyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562628|sp|Q6N6N1|SYV_RHOPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39649502|emb|CAE28024.1| valyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 957

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +    +++P ++ V G DI+ F    W A ++   L
Sbjct: 495 VLDTWFSSALWPFSTLGW---PDETPELDRYYPTNVLVTGFDIIFF----WVARMMMMGL 547

Query: 285 ------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 P P  V+ H  +   KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+
Sbjct: 548 HFMDDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLNLIDEYGADALRFTLAAMAAQGR 606

Query: 338 D 338
           D
Sbjct: 607 D 607



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 13/77 (16%)

Query: 2  KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          + R+ +  S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD       
Sbjct: 31 ERRDAVPYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD------- 83

Query: 60 KAAQNAGVTTKVFVDQN 76
              +AG+ T++ V++ 
Sbjct: 84 ----HAGIATQMVVERQ 96


>gi|325137586|gb|EGC60167.1| isoleucyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 929

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 50/141 (35%), Gaps = 30/141 (21%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDM-----ADVLDISYDDFIRTTE-------------KRHH 103
            +          D     FR++     A+ +     DFIR                K   
Sbjct: 106 VEKLHGK-----DMPKARFRELCREYAAEQVACQKKDFIRLGVLGDWDKPYLTMDFKTEA 160

Query: 104 DTCRILWKKISDKGDIYKGCY 124
           DT R+L       G+IYK  Y
Sbjct: 161 DTVRML-------GEIYKSGY 174


>gi|296127588|ref|YP_003634840.1| valyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296019404|gb|ADG72641.1| valyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 884

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 20/233 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P    V G DIL F    W A ++ A      ++P  K V+ +G I  K G K+SKSL
Sbjct: 478 FYPTTALVTGYDILFF----WVARMIMAGTHFMNDVPF-KDVYLNGLIRDKIGRKMSKSL 532

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           GN IDPIE+I+E G DA R+ L    +  G+D + D++  K  +    AN I N      
Sbjct: 533 GNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFK--MGGKFANKIYNSAKYIF 590

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
             I  + D            D+ ILS   + + +  + ++      A   +         
Sbjct: 591 GSIEDNADIKDLDNYTLENKDKWILSRLQKAIDDTTKKLKEYRFDEASQTIYKFYWNEFC 650

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D Y +  K ++LK  +  +    + V + V+ +   ++  F+P +  +I+  L
Sbjct: 651 DWYIEISK-FDLK--DESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYSNL 700



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 20/124 (16%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GH     + D+L RFHR+ G   L+  GTD           +AG+
Sbjct: 40  SIVIPPPNVTGVLHMGHGLNNTLQDILIRFHRMLGKCTLWMPGTD-----------HAGI 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+  V++  +   +  +  D+  + F++ T +  ++   I+ K++        GC   W
Sbjct: 89  ATQNVVERRLK--AEGKNKYDLGREAFVKKTWEVANEHHSIIVKQLEK-----IGCSCDW 141

Query: 128 YSLR 131
              R
Sbjct: 142 ERER 145


>gi|194466707|ref|ZP_03072694.1| leucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453743|gb|EDX42640.1| leucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 806

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  + TT+ + +   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKFYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 522 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 581

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D+ GL         +G    V R 
Sbjct: 582 SKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPWDEKGL---------HGANKWVQRV 632

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      F  +D  +  V ++ ++++ E+ +    + A++Q++  V+E 
Sbjct: 633 WRLLMDDNNHLRDRVSTF--NDGKLTKVYNQTVKKVTEDYERMHFNTAISQLMVFVNEA 689


>gi|238786082|ref|ZP_04630040.1| Leucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713021|gb|EEQ05075.1| Leucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 860

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|156936945|ref|YP_001434741.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|189030282|sp|A8A8T2|SYL_IGNH4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156565929|gb|ABU81334.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 1022

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 23/244 (9%)

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSH 293
            Y  +   L+    S   ++P D    GKD++R H  ++  F  +A  P    P+++  +
Sbjct: 630 KYGISAAVLEEARRSFDYWYPVDSRHSGKDLIRNHLTFF-IFNHAAIFPEDKWPRQIVVN 688

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           GF+  +G+K+SKSLGN+I     I     D +R  L+     G D  +  + + +     
Sbjct: 689 GFVNLEGKKMSKSLGNIIPITVAIRSFAPDIIRLVLLHSAELGSDADFRTEMVSR----- 743

Query: 354 LANGIGNLVS-RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               I NL   +S+   +KDY+G  P P   T  D   LS   + ++ +  NM   L  R
Sbjct: 744 ---AISNLREIKSIVEKVKDYNG--PRPANLTMLDAWYLSSFVKDVENVT-NMMEDLKIR 797

Query: 413 ALAQVIS--LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            +  V+   L++    Y +A +   + +   + A  VL  TVE   +   ++  F P  A
Sbjct: 798 EVTNVLYFILLNRTKEYLNALEA--MGRGLDEVAKWVLRYTVE---RWVKMMTPFTPFFA 852

Query: 471 NKIF 474
            +++
Sbjct: 853 EEMW 856



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y++ A  YPN+  H+GH+    + D  ARF R+ G +VLF  G    G  I   ++
Sbjct: 37  RPKFYVTAAFPYPNSPMHLGHSRTYSVTDAYARFKRMRGFNVLFPMGFHYTGTPIIAMSE 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI 89
                    V Q  +  R + +V  I
Sbjct: 97  K--------VKQGLQALRSLGEVKTI 114


>gi|312135070|ref|YP_004002408.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775121|gb|ADQ04608.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 817

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N +N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIQNMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 44/202 (21%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P ++IE+ G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIIEKYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 K---------RVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                     R+  +L N +   NLV  S                   E D+ +    + 
Sbjct: 624 GCFRFLNRLWRLYIELKNKLADDNLVGES-------------------ELDDELRYRLNY 664

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ E++  +   + A++ ++ L++ +  Y ++       K N D       + ++ +
Sbjct: 665 TIKKVTEDIGERFNFNTAISTIMELLNFLYEYKES------GKLNKD-------LIIDTL 711

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           R L IL+  F P +A ++++++
Sbjct: 712 RNLLILIYPFTPHIACELWEVM 733


>gi|146328949|ref|YP_001209169.1| leucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166231604|sp|A5EWD6|SYL_DICNV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146232419|gb|ABQ13397.1| leucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 867

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  QKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  QN    +     L   I +   I T    ++   + L+ ++  KG IY
Sbjct: 91  MKNQVAPAQWTYQNIAEMKKQLQSLGFAIDWSREITTCRPDYYRWEQWLFTRLYQKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y ++LL
Sbjct: 151 RKLGAVNWDPVDQTVLANEQVIDGRGWRSGAIVEKREIPM-------YYFRITDYAEELL 203

Query: 178 SYYE---SHPEFILPIER 192
           +  E     PE +  ++R
Sbjct: 204 NDLEQLDGWPERVKMMQR 221


>gi|145634089|ref|ZP_01789800.1| leucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|148826435|ref|YP_001291188.1| leucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845972|ref|ZP_04466084.1| leucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166231611|sp|A5UDF4|SYL_HAEIE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145268533|gb|EDK08526.1| leucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|148716595|gb|ABQ98805.1| leucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810976|gb|EEP46693.1| leucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|309973583|gb|ADO96784.1| Leucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 861

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|260912720|ref|ZP_05919206.1| leucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260633098|gb|EEX51263.1| leucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 860

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 6/183 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   +  D  + T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIDYMKNQLKILGFGFDWDREVTTCKPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGDLD 207

Query: 182 SHP 184
           + P
Sbjct: 208 NLP 210


>gi|225858409|ref|YP_002739919.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225720884|gb|ACO16738.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 883

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       +++P    V G DI+ F    W + ++  +L  
Sbjct: 443 VLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTGYDIIFF----WVSRMIFQSLEF 498

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 + V  HG I   +G K+SKSLGN IDP++VI++ G D+LR+FL    A G+D  
Sbjct: 499 TGRQPFQNVLIHGLIRDEEGCKMSKSLGNGIDPMDVIDKYGTDSLRWFLSNGSAPGQDVR 558

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--------ILKDYDGMIPTPGAFTESDESILS 392
           +  + +    N    N I N +SR + M        +  D    + T  A   +D  IL 
Sbjct: 559 FSYEKMDASWN--FINKIWN-ISRYILMNNEGLTLDVAHDNVTKVATGEAGNVTDRWILH 615

Query: 393 VCSRVLQEIREN 404
             +  + ++ EN
Sbjct: 616 NLNETIAKVTEN 627



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 25/168 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN   + H+GHA++  + D++ R  R+ G D L+  G D  G     K+ +  +
Sbjct: 40  SIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLR 99

Query: 64  NAGVT----------TKV--FVDQNSRNFRD----MADVLDISYDDFIRTTEKRHHDTCR 107
             G++          TKV  + D+ +   ++    M   +D S + F  T ++      R
Sbjct: 100 GEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERF--TLDEGLSKAVR 157

Query: 108 ILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++  +  KG IY+G +   W      A  + + ++K  +G +Y+  +
Sbjct: 158 KVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNY 205


>gi|15827774|ref|NP_302037.1| valyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230251|ref|YP_002503667.1| valyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|81537016|sp|Q9CBY7|SYV_MYCLE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13093326|emb|CAC30422.1| valyl-tRNA synthase [Mycobacterium leprae]
 gi|219933358|emb|CAR71566.1| valyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 886

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 38/237 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                     +P    VF HG 
Sbjct: 478 KFYPTSILVTGYDIL----FFWVARMMMLGTFVGGDDAITLGGCRGPQVPF-TDVFLHGL 532

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I  + G K+SKS GNVIDP+  ++  G DALR+ L R  + G D    +D ++   N   
Sbjct: 533 IRDEFGRKMSKSRGNVIDPLAWMDMFGADALRFTLARGSSPGGDLAIGEDHVRASRN--- 589

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               G  +  +    L +   ++P P   A T++D  IL    +V  E+          R
Sbjct: 590 ---FGTKLFNATRYALLNGAALVPLPALTALTDADRWILGRLEQVRAEVDSAFDGYEFSR 646

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           A   +       D + D    W L+      A  + + T  +   L  LL+   P +
Sbjct: 647 ACEALYHFA--WDEFCD----WYLELAKAQLADGLTHTTAVLAAALDTLLRLLHPVM 697



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKA--AQNAGVTT----KV 71
           H+GHA E  + D L R  R+ G +VL+  G D  G   Q + +   A N  +      ++
Sbjct: 60  HMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSVVEKQLAINGKIKEDFGREL 119

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           FVD+            +   R + D +D S D F  T +       R+++K++ D G IY
Sbjct: 120 FVDKVWDWKRESGGAIAGQMRRLGDGVDWSRDRF--TMDDGLSRAVRMIFKRLYDAGLIY 177

Query: 121 KG 122
           + 
Sbjct: 178 RA 179


>gi|325141637|gb|EGC64099.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 929

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE    +       H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 HARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|299536132|ref|ZP_07049446.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728407|gb|EFI68968.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 924

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 15/230 (6%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+ + G D  R  F+++   + L +   P  K V S G +L   G+K+SKS GN ++P
Sbjct: 542 PADVVIEGIDQTRGFFYSLLAVSTLFTGKPPY-KNVLSLGHVLDEHGQKMSKSKGNALEP 600

Query: 314 IEVIEEVGVDALRY-FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILK 371
           +E+IEE G DALR+ FLV         F  K  L  +  + L + + N      +   + 
Sbjct: 601 VELIEEYGADALRWAFLVDSSPWNPKRFSKKVVLDAK--SKLVDTLDNTFKFYDMYAQID 658

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF--- 428
           ++       G  ++ D  ILS     +  +  +M +    +A  ++  LV E+  ++   
Sbjct: 659 NFTYDATNTGTRSQLDHWILSRLHHTILLVTTSMDDYQFTQATREIGQLVEELSNWYIRR 718

Query: 429 DAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + W    T   R + + LY   E +  +  L+  F P +A  I+  L
Sbjct: 719 SRARFWANGMTADKRGAFSTLY---EALTSICQLIAPFTPFIAEDIYHQL 765



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTK 70
           N  PH+GHA+   I DV+AR+  + G  V    G D HG  +    + A G++ K
Sbjct: 50  NGLPHVGHAFGRTIKDVVARYKTMQGYLVERKAGWDTHGLPVELGVEKALGISGK 104


>gi|294084713|ref|YP_003551471.1| isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664286|gb|ADE39387.1| Isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 933

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +      L+N D  ++   PADL++ G D  R  FH+    +       
Sbjct: 544 ILDVWFDSGSTHAFV---LENRDDLES---PADLYLEGSDQHRGWFHSSLLQSCSTRGKA 597

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF+L  +G K+SKSLGNVI P +++E+ G D LR ++V
Sbjct: 598 PY-KGVLTHGFVLDEQGRKMSKSLGNVITPQKIMEQNGADILRLWVV 643



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 26/54 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           EK  +     Y N Q HIGHA   I+ DV+ R   + G D  +  G D HG  I
Sbjct: 53  EKFVLHDGPPYANGQLHIGHALNKILKDVVNRSQSMLGKDANYVPGWDCHGLPI 106


>gi|206889812|ref|YP_002248722.1| valyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741750|gb|ACI20807.1| valyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 943

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 12/122 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +  +  K +F+P ++ V G DI+ F    W A ++  
Sbjct: 507 DPD-VLDTWFSSALWPFSTLGWPEETEDLK-RFYPTNVLVTGFDIIFF----WVARMIMM 560

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +   K V      +H      KG+K+SKS GNVIDPI +IE+ G DA R+ L    A G
Sbjct: 561 GMKFMKDVPFRDVYIHALVRDSKGQKMSKSKGNVIDPIVMIEKYGADAFRFTLAAFAAQG 620

Query: 337 KD 338
           +D
Sbjct: 621 RD 622


>gi|90419972|ref|ZP_01227881.1| isoleucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336013|gb|EAS49761.1| isoleucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 1008

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  FH+    +       P    V +HGF++  +G K+SKSLGNV+ 
Sbjct: 629 WPADLYLEGSDQHRGWFHSSLLESCGTRGRAPY-DAVLTHGFVMDEEGRKMSKSLGNVVT 687

Query: 313 PIEVIEEVGVDALRYFLV 330
           P EVI++ G D LR ++V
Sbjct: 688 PQEVIKQSGADILRLWVV 705



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   ++ DV+ R  ++ G D  +  G D HG  I
Sbjct: 66  RPKYVLHDGPPYANGNLHIGHALNKVLKDVITRSFQMRGYDANYVPGWDCHGLPI 120


>gi|254700451|ref|ZP_05162279.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261750952|ref|ZP_05994661.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261740705|gb|EEY28631.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 877

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GHA    + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHARNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|239904844|ref|YP_002951582.1| valyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794707|dbj|BAH73696.1| valyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 888

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 16/130 (12%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIY 274
           G ++  DP  ++  W  +     TT G+   PD +K  A F+P  +     DIL F    
Sbjct: 442 GSRLTQDPD-VLDTWFSSALWPFTTMGW---PDQTKELATFYPTSVLSTAFDILFF---- 493

Query: 275 WPAFLLSANLPLPKKV-FSHGFILH-----KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           W A ++   L    +V F H +I       +G K+SKSLGN IDP+ ++E  G DALR+ 
Sbjct: 494 WVARMMMMGLHFMDEVPFRHVYIHALVRDAEGRKMSKSLGNGIDPLAMMERYGTDALRFT 553

Query: 329 LVREIACGKD 338
           L    A G+D
Sbjct: 554 LAAFAAMGRD 563



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQN 64
           S  I  PN     H+GHA  + I D+L R+HR  G  VL+  GTD  G   Q + + +  
Sbjct: 41  SIVIPPPNVTGALHMGHALNITIQDILCRYHRQLGRKVLWVPGTDHAGIATQNVVERSLA 100

Query: 65  AGVTTK 70
           A  T++
Sbjct: 101 AAGTSR 106


>gi|126733398|ref|ZP_01749145.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716264|gb|EBA13128.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 1045

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 17/133 (12%)

Query: 217 GIKIPDDPQYIMYVWIDA------LTNYLTTTGYLDNP-DGSKAKFWPADLHVIGKDILR 269
            IK+ D    +  +W D        ++ L   G L  P D    K++P D+ V G+DIL 
Sbjct: 596 AIKLLDKDNSVYPIWRDPDVLDTWFSSGLWPFGTLGWPADDEAMKYFPGDVLVTGQDILF 655

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVD 323
           F    W A ++  +  + ++   H   LH      KGEK+SK+ GNVIDP+++I+  G D
Sbjct: 656 F----WVARMMMMSQAVLEQDPFHTVYLHQLVRDAKGEKMSKTKGNVIDPLDMIDAYGAD 711

Query: 324 ALRYFLVREIACG 336
           ALR+   +  A G
Sbjct: 712 ALRFSNAQMAALG 724



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D+L R+ R+ G D L+  G D           +AG+ T++ V+++
Sbjct: 69  HVGHAFNHTIMDMLTRWKRMQGYDTLWQPGLD-----------HAGIATQLMVEKD 113


>gi|57652056|ref|YP_186641.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160962|ref|YP_494398.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195572|ref|YP_500378.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221863|ref|YP_001332685.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509976|ref|YP_001575635.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|258452309|ref|ZP_05700322.1| leucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282925645|ref|ZP_06333294.1| leucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294849919|ref|ZP_06790658.1| leucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304380647|ref|ZP_07363318.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|71153567|sp|Q5HF16|SYL_STAAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123003450|sp|Q2FXH2|SYL_STAA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123749601|sp|Q2FFY0|SYL_STAA3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|172048950|sp|A6QHU1|SYL_STAAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083154|sp|A8Z4I6|SYL_STAAT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57286242|gb|AAW38336.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126936|gb|ABD21450.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203130|gb|ABD30940.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374663|dbj|BAF67923.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368785|gb|ABX29756.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257860034|gb|EEV82869.1| leucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|269941236|emb|CBI49624.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282592425|gb|EFB97439.1| leucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294823258|gb|EFG39688.1| leucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304340754|gb|EFM06683.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140775|gb|EFW32626.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143786|gb|EFW35560.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314433|gb|AEB88846.1| Leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329727013|gb|EGG63470.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 805

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS-ANLPLP---KKVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L   A +P     +K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLAIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|328954555|ref|YP_004371889.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454879|gb|AEB10708.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 933

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 20/184 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  +Y      L+   G +   +PADL++ G D  R  FH+    A       
Sbjct: 532 ILDVWFDSGVSYACV---LEARPGLR---FPADLYLEGSDQHRGWFHSSLLTAVATRGQA 585

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  ++V +HGF +  +G+K+SKSLGN+I P +VI+E G + LR ++  E       + D+
Sbjct: 586 PY-RRVLTHGFAVDGEGKKMSKSLGNIIAPQDVIQEYGAEILRLWVSAE------DYRDE 638

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQ 399
             L  ++   L      L + +  ++   +D   P    +P    E D   L   ++++Q
Sbjct: 639 VRLSDQILKQLTEAYRRLRNTARFLLGNLFDFDPPRHYVSPQQREELDRLTLCWLAKLIQ 698

Query: 400 EIRE 403
            +RE
Sbjct: 699 RVRE 702



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +ER +  +     Y N   H+GHA   I+ D++ +  ++ G +  +T G D HG  I   
Sbjct: 47  QERPRYILHDGPPYANGNIHLGHALNKILKDIIIKSKQMSGFECPYTPGWDCHGLPIEHQ 106

Query: 62  AQNAGVTTKVFVDQNS--RNFRDMA-DVLDISYDDFIR 96
                   ++ + Q    +  R+ A   +DI   DF+R
Sbjct: 107 VDKELKKKRLHLSQLEVRQKCREYALKYIDIQRRDFMR 144


>gi|238762875|ref|ZP_04623843.1| Leucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698886|gb|EEP91635.1| Leucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 860

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|224438368|ref|ZP_03659295.1| valyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144810|ref|ZP_07807003.1| valyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129841|gb|EFR47458.1| valyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 903

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 12/97 (12%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPA-FLLSA-----NLPLPKKVFSHGFIL-HKGE 301
           D   + F+P  L + G DIL F    W A  LLS      +LP  K V+ H  +   KG+
Sbjct: 493 DSDLSDFYPNSLLITGFDILFF----WVARMLLSGESLLGSLPF-KDVYLHALVRDEKGQ 547

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           K+SKS GNVIDP+E+I   G D LR+ L    A G+D
Sbjct: 548 KMSKSKGNVIDPLEMISTYGADTLRFTLAILCAQGRD 584



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ RF R+DG   L+  G D  G
Sbjct: 58 HIGHALTFTLQDIITRFKRMDGFKTLYQPGLDHAG 92


>gi|254476459|ref|ZP_05089845.1| valyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214030702|gb|EEB71537.1| valyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 1037

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 11/119 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIY 274
           I I  DP  ++  W  +    + T G+ ++      K++P    V G+DIL F     + 
Sbjct: 590 ITITRDPD-VLDTWFSSGLWPIGTLGWPED-TAEMQKYFPTSTLVTGQDILFFWVARMMM 647

Query: 275 WPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               +L  +LP+ ++     V+ HG +   KG+K+SKS GNV+DP+++I+E G DALR+
Sbjct: 648 MQLAVLDQDLPVEQRIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLDIIDEYGADALRF 706



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD           +AG+
Sbjct: 39 SIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGYDTLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 88 ATQMVVER 95


>gi|89898198|ref|YP_515308.1| leucyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722314|sp|Q254X5|SYL_CHLFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89331570|dbj|BAE81163.1| leucyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 820

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD+     T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPEYYRWTQKLFLLLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y    +  Y        +++EV  G   +G Y   +    QW+       R++AY D+LL
Sbjct: 149 YMADMAVNYCPELGTVLSNEEVENGLSIEGGYPVERRMLRQWI------LRITAYSDQLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE +  ++R
Sbjct: 203 EGLEGLDWPENVKQLQR 219


>gi|330863394|emb|CBX73516.1| leucyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 552

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREITTCSPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQV---IDGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 RLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|221141486|ref|ZP_03565979.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262049067|ref|ZP_06021945.1| leucyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|284024805|ref|ZP_06379203.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|259162884|gb|EEW47448.1| leucyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|302751585|gb|ADL65762.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|315197228|gb|EFU27567.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
          Length = 804

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS-ANLPLP---KKVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L   A +P     +K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLAIVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 574 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 634 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 677 ISQLMVFINECYKVDEVYKPY 697



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200211|sp|A4IM25|SYI_GEOTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 924

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+ +       PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLVERDDLER------PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E++G D LR ++ 
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVA 621



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A    GV  K    
Sbjct: 58  YANGDIHMGHALNKILKDIIVRYKSMSGFCAPYVPGWDTHGLPIETALTKQGVDRKSMSV 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         +D   + F+ +    D  +D+   T +  +      ++ +++ KG 
Sbjct: 118 AEFRKLCEQYAYEQIDNQRQQFKRLGVRGD--WDNPYITLKPEYEAQQIKVFGEMAKKGL 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPVYWSPSSESALAEAEI 198


>gi|116670794|ref|YP_831727.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|189082980|sp|A0JX57|SYL_ARTS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116610903|gb|ABK03627.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 843

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 18/199 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 51  RERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGYDVLHPIGWDSFGLPAENAAI 110

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA  +  T   +D  + +F+  A  +   +   + T++  ++   + L+K+  ++G  
Sbjct: 111 KRNAHPSEWTYANIDTQAASFKRYA--ISADWSRRLHTSDPEYYRWTQWLFKRFYERGLA 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +  +D+    +++V  GA  +   A  + +  QW      +F+++ Y D+LL
Sbjct: 169 YRKDSPVNWCPKDQTVLANEQVVNGACERCGTAVTKKSLNQW------YFKITDYADRLL 222

Query: 178 SYYES----HPEFILPIER 192
              +      PE +L +++
Sbjct: 223 DDMDELRGHWPERVLAMQK 241



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 27/199 (13%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D  K   W P   +V G +    H +Y   F        ++ A+ P    + + 
Sbjct: 539 YTEGPFDPKKINDWMPVGQYVGGVEHAILHLLYARFFTKVIHDLGMIDADEPF-SALLNQ 597

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +L+ G+ +SKSLGN +D  E +++ GVDA+R  ++       D  +          AD
Sbjct: 598 GQVLNGGKAMSKSLGNGVDLGEQLDKYGVDAVRLTMIFASPPEDDVDW----------AD 647

Query: 354 LA-NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           ++ +G    ++R+  +       +   PGA   + D ++ SV  R + +    + +   +
Sbjct: 648 VSPSGSAKFLARAWRLA----QDVSSAPGADAAQGDRALRSVTHRTIADAAALLDSNKFN 703

Query: 412 RALAQVISLVSEVDRYFDA 430
             +A+++ LV+   +  DA
Sbjct: 704 VVVAKLMELVNATRKTIDA 722


>gi|253315868|ref|ZP_04839081.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 734

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 444 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 503

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 504 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 563

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 564 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 606

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 607 ISQLMVFINECYKVDEVYKPY 627


>gi|227543882|ref|ZP_03973931.1| leucine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909628|ref|ZP_07127089.1| leucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186143|gb|EEI66214.1| leucine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300893493|gb|EFK86852.1| leucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 806

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  + TT+ + +   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKFYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P DL+V G +    H +Y   W   L    L   K+ F    + G IL    EK+SK
Sbjct: 522 YWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVPTKEPFMKLVNQGMILGSNHEKMSK 581

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++++ G D LR + +      +   +D+ GL         +G    V R 
Sbjct: 582 SKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPWDEKGL---------HGANKWVQRV 632

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ D + +      F  +D  +  V ++ ++++ E+ +    + A++Q++  V+E 
Sbjct: 633 WRLLMDDNNHLRDRVSTF--NDGKLTKVYNQTVKKVTEDYERMHFNTAISQLMVFVNEA 689


>gi|223933830|ref|ZP_03625798.1| leucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897513|gb|EEF63906.1| leucyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 833

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYES--HPEFILPIER 192
           +  E    PE I  ++R
Sbjct: 205 NDLEEVDWPESIKDMQR 221


>gi|238755065|ref|ZP_04616413.1| Leucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706769|gb|EEP99138.1| Leucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 860

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDSK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 KLESWPEQVKTMQR 221


>gi|269863760|ref|XP_002651335.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220064713|gb|EED42720.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 94

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 5  EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10 KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64 NAGVTTKVFVDQNSRNFRDMAD 85
              T +  V +N    +++ D
Sbjct: 70 KQNTTPEQIVQKNRVLHKEVYD 91


>gi|189083236|sp|A4XYW8|SYL_PSEMY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 19/243 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNQVAPAKWTYENIAYMKSQLKSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LLS
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLS 204

Query: 179 Y---YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIMYVW 231
                +  PE +  ++R     SF    + D  ++    D  +K+    PD      YV 
Sbjct: 205 SLDELDGWPEQVKTMQRNWIGKSFGADIVFDYDVASIGIDGQLKVYSTRPDTLMGATYVA 264

Query: 232 IDA 234
           + A
Sbjct: 265 VAA 267


>gi|169628693|ref|YP_001702342.1| valyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240660|emb|CAM61688.1| Valyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 879

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 105/262 (40%), Gaps = 34/262 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAF-- 278
           DP  ++  W  +     +T G+   P+ +    KF+P  + V G DIL F       F  
Sbjct: 450 DPD-VLDTWFSSALWPFSTMGW---PEATPELEKFYPTSVLVTGYDILFFWVARMMMFGT 505

Query: 279 -------LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                  L    +P    VF HG I  + G+K+SKS GN IDP++ +E  G DALR+ L 
Sbjct: 506 FVADGPALHGGKVPF-DNVFLHGLIRDQFGQKMSKSKGNGIDPLDWVEMFGADALRFTLA 564

Query: 331 REIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           R  + G D    +D  +   N    L N     +    ++      G +P     T++D 
Sbjct: 565 RGASPGGDLSIGEDAARASRNFTTKLFNATRFALMNGAAL------GELPDVAELTDADR 618

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTN-PDRAS 445
            IL    +V  E+   +       A   +       D + D    W  EL K    DRA 
Sbjct: 619 WILGRLEQVRAEVDGALDRYEFSVACEGLYHFA--WDEFCD----WYLELAKVQMVDRAE 672

Query: 446 TVLYVTVEVIRQLAILLQAFVP 467
           +   V   V+  L  LL   +P
Sbjct: 673 STRVVLATVLDTLLRLLHPVIP 694



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + D L R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 61  HMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQSVVEKQLAADGKTKEDFGREL 120

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+++                R + D +D S D F  T ++      R ++KK+ D G IY
Sbjct: 121 FIEKVWDWKRESGGTIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKKLFDAGLIY 178

Query: 121 K 121
           +
Sbjct: 179 R 179


>gi|120603281|ref|YP_967681.1| valyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120563510|gb|ABM29254.1| valyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 884

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 56/285 (19%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPA 277
           +  DP  ++  W  +     +T G+   P  +K  A F+P  + V G DIL F    W A
Sbjct: 443 LTQDPD-VLDTWFSSALWPFSTMGW---PGKTKDLATFYPTSVLVTGFDILFF----WVA 494

Query: 278 FLLSANL----PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   +     +P K V+ H  +   +G K+SKS GNVIDP+ +I++ G D+LR+ L  
Sbjct: 495 RMMMLGMHFMDEVPFKHVYLHALVRDGEGRKMSKSTGNVIDPLAMIDKYGTDSLRFTLAA 554

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D          +++ D   G  + V++            +     F+  +    
Sbjct: 555 FAAMGRD---------IKLSEDRIEGYRHFVNK------------VWNAARFSLMNLPEE 593

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY-------------FDAQKPWELKK 438
           +  S  L  ++      ++HR      S  + +D Y             ++    W L+ 
Sbjct: 594 APVSLDLDNVKGMHHKWILHRLEELKASQAAGIDGYRFNEVAQGLYRFWWNEFCDWYLEL 653

Query: 439 TNPD------RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             PD      R +T  YV   V+R+  +LL  F+P +  +++  L
Sbjct: 654 IKPDMQAGGERQATAQYVLWTVLREALLLLHPFMPFVTAEVWQAL 698


>gi|119617425|gb|EAW97019.1| methionine-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119617426|gb|EAW97020.1| methionine-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 427

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  L I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G      
Sbjct: 263 ERNVL-ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETK 321

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           A   G+T +   D+      D+    +IS+D F RTT  + 
Sbjct: 322 ALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQ 362


>gi|118472696|ref|YP_888893.1| valyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118173983|gb|ABK74879.1| valyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 872

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW----------P 276
           ++  W  +     +T G+ D+     AKF+P  + V G DIL F               P
Sbjct: 452 VLDTWFSSALWPFSTMGWPDHTP-ELAKFYPTSVLVTGYDILFFWVARMMMFGTFVGDDP 510

Query: 277 AFLLSA----NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A  L       +P  + VF HG I  + G K+SKS GN IDP++ +E+ G DALR+ L R
Sbjct: 511 AVTLEGARGRQVPF-ENVFLHGLIRDEFGRKMSKSRGNGIDPLDWVEKFGADALRFTLAR 569

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G D    +D    R + + A  + N  +   +++       +P     T++D  IL
Sbjct: 570 GASPGGDLSIGED--HARASRNFATKLFN--ATRFALMNGAAPAPLPAASELTDADRWIL 625

Query: 392 SVCSRVLQEIRENMQNQLIHRA 413
                V  E+     N   +RA
Sbjct: 626 GRLEEVRAEVDSAFDNYEFNRA 647



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 22/121 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTKVFVDQN- 76
           H+GHA +  + DVL R  R+ G +VL+  G D  G   Q + +    A   TK  + +  
Sbjct: 60  HMGHALDHTLMDVLTRRKRMQGYEVLWLPGMDHAGIATQTVVEKQLAADGKTKEDLGREE 119

Query: 77  ----------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                               R + D +D S D F  T ++      R ++K++ D G IY
Sbjct: 120 FVAKVWDWKRESGGTIGGQMRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLFDAGLIY 177

Query: 121 K 121
           +
Sbjct: 178 Q 178


>gi|110596914|ref|ZP_01385204.1| valyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341601|gb|EAT60061.1| valyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 903

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 15/155 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +    LTT G+ D  + +     F+P +  V G DI+ F    W A ++ A L
Sbjct: 458 VLDTWFSSWLWPLTTLGWTDRHSDNADLRAFYPTNTLVTGPDIIFF----WVARMIMAGL 513

Query: 285 ------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P     F+      KG K+SKSLGN  DP++VI+  G DALR+ ++     G+D
Sbjct: 514 YFKGEVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQD 573

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             + ++  K  +  + A  I N  +R V M  + Y
Sbjct: 574 VLFGEE--KCELGRNFATKIWN-ATRLVFMQREKY 605


>gi|15964550|ref|NP_384903.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307314740|ref|ZP_07594336.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307320034|ref|ZP_07599455.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|15073728|emb|CAC45369.1| Probable isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894249|gb|EFN25014.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306898964|gb|EFN29610.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 969

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 572 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCATRGRA 625

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GN + P EV+++ G D LR +++
Sbjct: 626 PY-NAVITHGFTMDEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVM 671



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKIE 113

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRT----------TEKRHHDTCR 107
            K  +      +V V++  +  R+ A   + I  ++F R           T    H   R
Sbjct: 114 EKYREKGKNKDEVPVNEFRKECREFASGWIGIQTEEFKRLGIEGDFENPYTTMNFHAEAR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELMKIARSGQLYRGSKPVMWSVVERTALAEAEV 209


>gi|319775147|ref|YP_004137635.1| leucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329122935|ref|ZP_08251506.1| leucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317449738|emb|CBY85945.1| leucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471866|gb|EGF17306.1| leucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 861

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDNLPQW 212


>gi|282866707|ref|ZP_06275747.1| valyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282558406|gb|EFB63968.1| valyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 809

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 9/178 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +T G+ +     K KF+P D+ + G DI+ F     + +  +++   
Sbjct: 464 VLDTWFSSGLWPFSTLGWPEQTPDLK-KFYPTDVLLTGHDIIFFWVARMMMFGLYVMDGE 522

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K +   G +   +G+K+SKS GNV+DP++ ++  G DA+R+ L +    G D    
Sbjct: 523 APF-KTIALTGLVRDERGKKMSKSFGNVVDPLDWMDTYGSDAVRFTLAKGANPGTDVPIG 581

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D ++   N   AN I N  +R   M      G +P     + +D  ILS  ++ + E
Sbjct: 582 EDWVQASRN--FANKIWN-ATRFALMNGATVKGELPPVEQLSATDRWILSRLNKTVAE 636


>gi|322386609|ref|ZP_08060234.1| leucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269282|gb|EFX52217.1| leucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 835

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 33  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 93  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 152

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 153 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 206

Query: 178 S 178
           +
Sbjct: 207 N 207


>gi|315038057|ref|YP_004031625.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276190|gb|ADQ58830.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 927

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 523 ILDVWFDSGSSW---SGVMEKRDGLH---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+ +G + +R ++ +
Sbjct: 577 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQ 623



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|289621798|emb|CBI51709.1| unnamed protein product [Sordaria macrospora]
          Length = 1007

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 27/201 (13%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IADV+ARF  L G  VL   G D  G     AA   G+
Sbjct: 92  YVLPMFPYPSGYLHLGHLRVYTIADVIARFQTLQGHKVLLPMGWDAFGLPAENAAIERGI 151

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTEKRHHDTCRILWKKISDKG 117
               +   N    ++  DV++ S+D          DF + T+K        ++  + +KG
Sbjct: 152 NPATWTKANIAKMKEQLDVMNGSWDWDCELATCDPDFYKHTQK--------IFLALHEKG 203

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL- 176
             Y+      Y   D+    +++V   A+G+ + +    V+  + + +F ++S +++ L 
Sbjct: 204 LAYQAEAEVNYDPVDKTVLANEQV--DANGRSWRSGAK-VEKRKLKQWFLKISEFRESLL 260

Query: 177 -----LSYYESHPEFILPIER 192
                L+  E+ PE +L +++
Sbjct: 261 KDLDTLAKDEAWPERVLAMQK 281


>gi|167721227|ref|ZP_02404463.1| leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 864

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQAMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|163739653|ref|ZP_02147062.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161387112|gb|EDQ11472.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 1024

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 11/104 (10%)

Query: 235 LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKK 289
            ++ L   G L  P+ ++  +K++P    V G+DIL F     +     +L  +LP+ ++
Sbjct: 590 FSSGLWPIGTLGWPEWTEETSKYFPTSTLVTGQDILFFWVARMMMMQLAVLDQDLPVEQR 649

Query: 290 -----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
                V+ HG +   KG+K+SKS GNV+DP+E+I+E G DALR+
Sbjct: 650 IPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEYGADALRF 693



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 14/75 (18%)

Query: 3  EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          +R + Y S  I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD        
Sbjct: 33 KRSETY-SVMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTD-------- 83

Query: 61 AAQNAGVTTKVFVDQ 75
             +AG+ T++ V++
Sbjct: 84 ---HAGIATQMVVER 95


>gi|126341628|ref|XP_001379477.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Monodelphis domestica]
          Length = 903

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 12/142 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+DV+ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDVMARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R+  D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIEQSLHPQSWTQSNIKHMREQLDKLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           Y          R EA  N D V
Sbjct: 199 Y----------RKEALVNWDPV 210



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N IDP EV+++ G+D +R +++      KD  +D       V  D   G+  
Sbjct: 638 EKMSKSKYNGIDPEEVVKQYGIDTVRLYILFAAPPEKDLLWD-------VKTDALPGVLR 690

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
               L S +   I     G +PTP   +  ++
Sbjct: 691 WQQRLWSVTTKFIEARASGQVPTPHVLSHKEQ 722


>gi|223040430|ref|ZP_03610704.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878280|gb|EEF13387.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 823

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 20/181 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 36  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKRGYNVLHPIGFDSFGMPAENAAIKH 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS--------DKG 117
            +  K++  +N    R   + L +S+      ++KR   T   L+ K          +KG
Sbjct: 96  KIHPKIWTYENIDYMRGELEALGLSF------SKKREFATSDPLYTKFEQEFFIKMYEKG 149

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            +Y K     W    D+    +++V  G   +  NA    V   E  GY+ +++ Y  +L
Sbjct: 150 LVYRKSAVVNWCEF-DQTVLANEQVEDGCCWRCGNA----VIQRELPGYYLKITDYAQEL 204

Query: 177 L 177
           L
Sbjct: 205 L 205



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 30/43 (69%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++ + G +L  G+K+SKS GNV+DP ++I + G D  R F++
Sbjct: 577 ERLLTQGMVLKDGKKMSKSKGNVVDPDDIINKYGADTARLFIL 619


>gi|114327597|ref|YP_744754.1| valyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327431|sp|Q0BTM1|SYV_GRABC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|114315771|gb|ABI61831.1| valyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 896

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 19/161 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ ++ D   ++++P D+ + G DI+     +W A ++   L +
Sbjct: 467 VLDTWFSSALWPFSTLGWPED-DSILSRYYPTDVLITGFDII----FFWVARMMMMGLHI 521

Query: 287 PKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+V     + HG +   +G+K+SKS GNVIDP+ +IE  G D +R+ +      G+D  
Sbjct: 522 QKQVPFRDVYIHGLVRDERGQKMSKSKGNVIDPLALIEAHGADPMRFAICLLAGPGRD-- 579

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
             K G  KRV  D +  +  L + SV     + +G+ P PG
Sbjct: 580 -IKLG-PKRVE-DASRFVTKLWNASV---FCERNGVKPEPG 614



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D L R+ R+ G DVL+  GTD           +AG+ T++ V++
Sbjct: 55 HMGHALTFTLQDSLVRWRRMQGRDVLWQPGTD-----------HAGIATQMVVER 98


>gi|261393180|emb|CAX50798.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase; IleRS)
           [Neisseria meningitidis 8013]
          Length = 929

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|221194428|ref|ZP_03567485.1| valyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185332|gb|EEE17722.1| valyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 895

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 47/245 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP----DDPQY------------------------IMYVWIDAL 235
           L+D ++SR+ + WG +IP    DD  +                        ++  W  + 
Sbjct: 399 LRDWNISRQLW-WGHRIPVFYCDDCGWQDALMEDTDVCPKCGGHHVRQDEDVLDTWFSSQ 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----V 290
                T G+ ++P+  +    P  + V  +DI+      W A ++ ++L   K+     V
Sbjct: 458 LWTFATQGWPEHPEQLEGHH-PTKVLVTARDIIAL----WVARMIMSSLYFTKEIPFHDV 512

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD------K 343
           F +  IL K G ++SKS GN ++P+++I + G DA+RY L+  I   +D  +D       
Sbjct: 513 FIYATILAKDGSRMSKSKGNGVNPMDLIAKYGADAMRYNLLTLITNNQDVKFDAVLDKKT 572

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIR 402
             L +    D A      +  +   +  + DG  P  P A T  D  + S  +RV  E  
Sbjct: 573 KELLESPRTDQARSFVTKIWNASRFVQMNLDGYTPGEPKAKTPEDAWMFSRLARVTAETT 632

Query: 403 ENMQN 407
           E +++
Sbjct: 633 EQLES 637


>gi|163793116|ref|ZP_02187092.1| Valyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181762|gb|EDP66274.1| Valyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 888

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P D+ V G DI+ F    W A ++   L  
Sbjct: 452 VLDTWFSSALWPFSTLGWPEETP-ELARYYPGDVLVTGFDIIFF----WVARMMMMGLHF 506

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K V      +H      KG+K+SKS  NVIDP+E+I+  G DALR+ L    A G+D
Sbjct: 507 MKDVPFRTVYIHALVRDAKGQKMSKSKNNVIDPLELIDRYGTDALRFTLTAMAAQGRD 564



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D+L R+ R+ G D L+  GTD           +AG+ T++ V++N    
Sbjct: 50  HMGHALTFTVQDILTRYQRMTGRDALWQPGTD-----------HAGIATQMVVERNLAA- 97

Query: 81  RDMADVLDISYDDFI 95
            +  D  D+  D FI
Sbjct: 98  -EGVDRRDLGRDAFI 111


>gi|150395637|ref|YP_001326104.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027152|gb|ABR59269.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 969

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 572 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCATRGRA 625

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GN + P EV+++ G D LR +++
Sbjct: 626 PY-NAVITHGFTMDEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVM 671



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKIE 113

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRT----------TEKRHHDTCR 107
            K  +      +V V++  +  R+ A   + +  ++F R           T    H   R
Sbjct: 114 EKYREKGKNKDEVPVNEFRKECREFASGWIGVQTEEFKRLGIEGDFENPYTTMNFHAEAR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELMKIARSGQLYRGSKPVMWSVVERTALAEAEV 209


>gi|238795402|ref|ZP_04638917.1| Leucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720521|gb|EEQ12322.1| Leucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 860

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|213019556|ref|ZP_03335362.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994978|gb|EEB55620.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 1054

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 16/225 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLG 308
           K +PAD   I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L 
Sbjct: 560 KNFPADF--ITEYIAQTRGWFYTLFVLSTALFDSEPF-KNCICHGVVLDVKGQKLSKRLN 616

Query: 309 NVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDG-LKKRVNADLANGIGNLVSRSV 366
           N  DP+EV ++ G DALR+ ++   I CG +   DK+G L + V  ++   I N  S   
Sbjct: 617 NYADPMEVFDKYGSDALRFLMLSGSIVCGGNLLLDKEGNLVRDVLKNVIKPIWN--SYHF 674

Query: 367 SMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +  + DG+        +S  D  ++S C   ++ I+ +M N     A   +      +
Sbjct: 675 FTMYANADGIKAEICQDYQSTIDRYMISKCFEAVEGIQASMNNYNSQEACKILTDFFEVL 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + ++  +      K++ D+  T  Y  +  +     +L+A  P L
Sbjct: 735 NNWYIRRSRERFWKSDLDQDKTDAYNVLYTV--FYYMLRAAAPLL 777


>gi|134280305|ref|ZP_01767016.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237813817|ref|YP_002898268.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|254180643|ref|ZP_04887241.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|134248312|gb|EBA48395.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|184211182|gb|EDU08225.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|237505604|gb|ACQ97922.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 864

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQAMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGVA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|319892187|ref|YP_004149062.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161883|gb|ADV05426.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464712|gb|ADX76865.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
          Length = 915

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 37/275 (13%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           Q IM VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +    
Sbjct: 522 QDIMDVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATR 574

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K + SHGF++  +G+K+SKSLGNVI P  ++++ G D  R ++        D  
Sbjct: 575 GRSPY-KMLLSHGFVMDGEGKKMSKSLGNVIVPDTIVKQKGADIARLWV-----SSVDYL 628

Query: 341 YDKDGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            D      R++ ++ N + ++   +  ++  +L + +   P      E+D  +L V   +
Sbjct: 629 AD-----VRISDEILNQVADVYRKIRNTLRFLLGNINDYNPATDRIAEAD--LLEVDRYI 681

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP----------WELKKTNPDRASTV 447
           L  +RE     L H      +++  EV  + + +              +++ N  +  ++
Sbjct: 682 LNRLREFTAGTLDHYESFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSM 741

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             V  E++  +  LL   +P  A +++  +   DE
Sbjct: 742 QTVLFEILVNMTKLLAPIIPHTAEEVWSHIEQVDE 776



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A    GV  K   +
Sbjct: 58  YANGNLHMGHALNKILKDFINRYKTMQGFYTPYVPGWDTHGLPIEQALTKKGVKRK---E 114

Query: 75  QNSRNFRDMADV-----LDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
             +  FRD         +DI   DF+R            T K  ++  +I L+ +++DKG
Sbjct: 115 MTTAEFRDKCQAFAMEQIDIQKKDFLRLGVNGDFDNPYITLKPEYEAAQIRLFGEMADKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 LIYKGKKPVYWSPSSESSLAEAEI 198


>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 918

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 523 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E++G D LR ++
Sbjct: 577 PY-KGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWV 621



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 25/160 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A
Sbjct: 45  KDRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYCAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK--------- 111
             +N GV  K   + +   FR + +    +Y+   R  E+      R  W          
Sbjct: 105 LTKNKGVNRK---EMSVAEFRKLCE--QYAYEQIDRQREQFKRLGVRGDWDNPYITLTPE 159

Query: 112 ----------KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                     +++ KG IYKG    ++S   E+   + E+
Sbjct: 160 YEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 199


>gi|327191807|gb|EGE58807.1| valyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 947

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDDNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|325956509|ref|YP_004291921.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333074|gb|ADZ06982.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327183337|gb|AEA31784.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 927

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++   +G ++  DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 523 ILDVWFDSGSSW---SGVMEKRDGLH---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+ +G + +R ++ +
Sbjct: 577 PY-KEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMGAEIIRLWVAQ 623



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|318604765|emb|CBY26263.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 860

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREITTCSPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 RLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|270263710|ref|ZP_06191979.1| leucyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042594|gb|EFA15689.1| leucyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 902

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 74  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 133

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 134 KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCDPDYYRWEQWFFTKLYEKGLVYK 193

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 194 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 249

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 250 TLESWPEQVKTMQR 263


>gi|145636946|ref|ZP_01792610.1| leucyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269804|gb|EDK09743.1| leucyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 434

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L   +  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEF 186
            ++ P++
Sbjct: 206 LDTLPQW 212


>gi|298695026|gb|ADI98248.1| Leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 805

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 IVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|190571034|ref|YP_001975392.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357306|emb|CAQ54735.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 1056

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 16/225 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLG 308
           K +PAD   I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L 
Sbjct: 562 KNFPADF--ITEYIAQTRGWFYTLFVLSTALFDSEPF-KNCICHGVVLDVKGQKLSKRLN 618

Query: 309 NVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDG-LKKRVNADLANGIGNLVSRSV 366
           N  DP+EV ++ G DALR+ ++   I CG +   DK+G L + V  ++   I N  S   
Sbjct: 619 NYADPMEVFDKYGSDALRFLMLSGSIVCGGNLLLDKEGNLVRDVLKNVIKPIWN--SYHF 676

Query: 367 SMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +  + DG+        +S  D  ++S C   ++ I+ +M N     A   +      +
Sbjct: 677 FTMYANADGIKAEICQDYQSTIDRYMISKCFEAVEGIQASMNNYNSQEACKILTDFFEVL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + ++  +      K++ D+  T  Y  +  +     +L+A  P L
Sbjct: 737 NNWYIRRSRERFWKSDLDQDKTDAYNVLYTV--FYYMLRAAAPLL 779


>gi|114763990|ref|ZP_01443231.1| isoleucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543582|gb|EAU46596.1| isoleucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 996

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 48/263 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +       D  DG++     AD+++ G D  R  FH+    A       
Sbjct: 603 VLDVWFDSGSTHAFV--LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSMLQACGTIGRA 658

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF L  KG K+SKSLGN I P EV+++ G D LR ++ +         Y  
Sbjct: 659 PY-RNVVTHGFTLDEKGNKMSKSLGNTIVPEEVVKQYGADILRLWVAQTD-------YTA 710

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D   +R+  ++  G+ +   R    +      M+   G F+E+D        RV  +   
Sbjct: 711 D---QRIGPEILKGVADSYRR----LRNTMRFMLGALGHFSEAD--------RVAADDMP 755

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV------IRQ 457
            ++  ++HR LA++ + V E  R +D Q  ++         S   + TV++      IR+
Sbjct: 756 ELERWVLHR-LAELDAKVQEGYRSYDFQSVFQ---------SVFTFCTVDLSAFYFDIRK 805

Query: 458 LAILLQAFVP--KLANKIFDILF 478
            A+         + A  + DILF
Sbjct: 806 DALYCDGDTERRRAARTVMDILF 828



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 10/102 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           ER    +     Y N   HIGHA    I D++ R H++ G +  +  G D HG       
Sbjct: 51  ERPPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGHEARYVPGWDCHGLPIEWKI 110

Query: 56  -QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            ++     +N      +   Q  R F +    +DI  D+F R
Sbjct: 111 EEQYRAKGKNKDEVPVIDFRQECRKFAE--GWVDIQRDEFKR 150


>gi|329121046|ref|ZP_08249677.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471208|gb|EGF16662.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 828

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 27/203 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     AA 
Sbjct: 37  KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVIARFKKMQGFNVLHPMGYDAFGMPAENAAI 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N +N       L +SYD D  + T ++ ++   + L++    +G  YK
Sbjct: 97  QNGIAPSKWTYSNIKNMIRQQTELGLSYDWDIDVLTCKEDYYKHTQKLFEVFYKRGLAYK 156

Query: 122 ---------GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                    GC++    L +E   N     K    +    + N  QW      FF+++ Y
Sbjct: 157 KEAKVNWCNGCHT---VLANEQVENG----KCWRCKSIVEKKNLSQW------FFKITDY 203

Query: 173 QDKLLS---YYESHPEFILPIER 192
            ++LL      E  PE +  ++R
Sbjct: 204 AERLLKDLDLLEGWPERVKSMQR 226



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 84/188 (44%), Gaps = 22/188 (11%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K +   G +L  G K+SKS+GNV+ P E++ + G D  R F++      KD  +   G++
Sbjct: 573 KNLLCQGMVLKDGGKMSKSVGNVVSPEEIVSKYGADTARLFILFAAPPEKDLEWSDKGVE 632

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                    G    + R   ++ +  +    +     E+++++     R + ++  ++  
Sbjct: 633 ---------GAYRFLKRVWIIVDRFINLKTESREELNENEKALRRRLHRSIAKVTSDLNG 683

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A++ ++ LV+++  + + +            +     V  E +R L ILL  FV
Sbjct: 684 KFSFNTAISSIMELVNDMYHFSETE------------SIVSESVVNECLRNLIILLAPFV 731

Query: 467 PKLANKIF 474
           P +  +++
Sbjct: 732 PHITEELW 739


>gi|229161182|ref|ZP_04289169.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228622278|gb|EEK79117.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 1033

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 21/259 (8%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N +  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 513 VIDVWFDSGSMPFAQYHYPFENKELFEEQF-PADVIAEGIDQTRGWFYSLLAVSALYTGK 571

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFY 341
           +P  K+V S G +L  +G+K+SKS GN +DP++++ + G DALR+  LV         F 
Sbjct: 572 VPY-KRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNKFGADALRWALLVDSAPWNAKRFS 630

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRVL 398
           ++  L+ +  +   + + N+ S  V  +  + D   P         + DE +LS      
Sbjct: 631 ERTVLEAK--SKFVDTLVNVYSFYV--LYANLDKYNPNETYDVKRMKLDEWVLSRLHSTT 686

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EV 454
           +++R  + +     A  ++ +LV EV  ++      + WE    N ++A+   Y T+ EV
Sbjct: 687 KKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA--YDTLHEV 743

Query: 455 IRQLAILLQAFVPKLANKI 473
           +  ++ L+  F P +A  +
Sbjct: 744 LVTISKLIAPFTPFVAEDV 762



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +   G++ K  +++
Sbjct: 50  NGLPHVGHALGRTIKDVVARYKTMVGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEE 109

Query: 76  NS----------------RNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R+  + +   +  DD   T E  + ++   +   I +KG
Sbjct: 110 YGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKG 169

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     Y    +   +  EV +G
Sbjct: 170 LLYKGHRVSPYCPSCQTSLSSHEVAQG 196


>gi|195953430|ref|YP_002121720.1| leucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933042|gb|ACG57742.1| leucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 599

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+ + H+GH     I D +AR  R++G +VL   G D  G     AA   
Sbjct: 26  KFYVLEMFPYPSGKIHMGHVRNYTIGDAIARIKRMEGHNVLHPMGWDAFGLPAENAAIKN 85

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +   ++  QN    R     L  SY  D  I T    ++   + ++ K+ +KG +Y+  
Sbjct: 86  NLRPDIWTYQNIDYMRAQLKSLGFSYDWDREIATCNPDYYKWNQWIFLKMYEKGVVYRKT 145

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +  +   D+    +++V    DG+ +      VQ  E   ++ +++ Y ++LL
Sbjct: 146 ATVNWCPHDQTVLANEQV---IDGKCWRCGTLIVQ-KEIPSWYIKVTDYAERLL 195


>gi|19113981|ref|NP_593069.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1351163|sp|Q09828|SYLM_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|1022354|emb|CAA91210.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 874

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 15/189 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI +   YP+   HIGH     I+D+L+R++R+ G  V+   G D  G     AA  
Sbjct: 58  KKKYILSMFPYPSGLLHIGHVRVYTISDILSRYYRMKGYKVIHPMGWDAFGLPAENAAIE 117

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G++   +  +N +  ++    ++I   +D  I T    ++   + L+ ++  KG  Y+ 
Sbjct: 118 NGISASSWTYENIKKMKEQTYHMNIYFDWDREISTCNPDYYKWSQYLFLQMFHKGLAYQA 177

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAYQDKLL 177
             +  +   D     +++V   + G+ + +     + N  QW      F ++S Y D+LL
Sbjct: 178 EATVNWDPVDCTVLANEQV--DSHGRSWRSGAIVEKKNLRQW------FLKISDYSDQLL 229

Query: 178 SYYESHPEF 186
              E+ P++
Sbjct: 230 DDLETLPKW 238


>gi|312876049|ref|ZP_07736038.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797247|gb|EFR13587.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 817

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 91/193 (47%), Gaps = 26/193 (13%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENM 405
                    G    ++R   + + +    +       ES  D+ +    +  ++++ E++
Sbjct: 624 ---------GCFRFLNRLWRLYI-ELKSKLADESLLGESELDDELKYRLNYTIKKVTEDI 673

Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
             +   + A++ ++ L++ +  Y       E  K N D       + ++ +R L IL+  
Sbjct: 674 GERFNFNTAISTIMELLNFLYEYK------EKGKLNKD-------LIIDTLRNLLILIYP 720

Query: 465 FVPKLANKIFDIL 477
           F P +A ++++I+
Sbjct: 721 FTPHIACELWEIM 733


>gi|296313351|ref|ZP_06863292.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840168|gb|EFH24106.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 929

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE    +       H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|320010826|gb|ADW05676.1| valyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 884

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 27/264 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +T G+ +     K KF+P D+ + G DI+ F     + +  +++   
Sbjct: 464 VLDTWFSSGLWPFSTLGWPEETPDLK-KFYPTDVLLTGHDIIFFWVARMMMFGLYVMDGE 522

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K +   G +   +G+K+SKS GNV+DP++ ++  G DA+R+ L +    G D    
Sbjct: 523 APF-KTIALTGLVRDERGKKMSKSFGNVVDPLDWMDTYGSDAVRFTLAKGANPGTDVPIG 581

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-- 400
           +D ++   N   AN I N  +R   M     +G +P     + +D  ILS  ++ + +  
Sbjct: 582 EDWVQASRN--FANKIWN-ATRFAMMNGATVEGELPPVEQLSATDRWILSRLNKTVADAD 638

Query: 401 -IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKT----NPDRASTVLYVTVE 453
              E+ Q   +  AL          D  FD    W  EL KT      ++A     V  E
Sbjct: 639 AFYEDFQFAKLSDALYHFA-----WDEVFD----WYVELSKTTFFAGGEQAKVSARVLGE 689

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+     LL   VP +  +++  L
Sbjct: 690 VLDVTLRLLHPIVPFVTEQLWTTL 713


>gi|218887851|ref|YP_002437172.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758805|gb|ACL09704.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 883

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 39/168 (23%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDPQY-------------IMYVWIDALT 236
           ++D  +SR+ + WG +IP              D P+              ++  W  +  
Sbjct: 399 IRDWCISRQIW-WGHRIPAWTCGDCGKLIVAVDAPERCACGSANLTQDEDVLDTWFSSAL 457

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGF 295
              +T G+ D     K  F+P  + V G DIL F    W A ++   L    +V F H +
Sbjct: 458 WPFSTMGWPDETRELKT-FYPTSVLVTGFDILFF----WVARMMMMGLHFMDEVPFRHVY 512

Query: 296 ILH-----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           I       +G K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D
Sbjct: 513 IHALVRDAEGRKMSKSTGNVIDPLEMIDKYGTDSLRFTLAAFAAMGRD 560


>gi|149187033|ref|ZP_01865340.1| valyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148829322|gb|EDL47766.1| valyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 902

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 46/267 (17%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +      T G+ D  D    K +P DL + G DIL F    W A +      L
Sbjct: 482 VLDTWFSSALWPFATLGWPDKTD-LLDKHYPNDLLISGFDILFF----WDARMMMQGMHL 536

Query: 281 SANLPLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +   P P+ ++ HG +    G K+SKS GNV+DP+ +I++ G DALR+F+    + G+D 
Sbjct: 537 TGKAPWPR-LYLHGLVRAADGAKMSKSKGNVVDPLGLIDQYGADALRFFMSAMESQGRDI 595

Query: 340 FYDKDGLK-------KRVNAD---LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             D+  ++       K  NA     +NGIG   S             I  P A    ++ 
Sbjct: 596 KMDERRVEGYRNFATKLWNATRFCQSNGIGASTS-------------IAAPKATQAVNKW 642

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTV 447
           I+       + +   M +     A   +   V   DR+ D    W  EL K N D  +  
Sbjct: 643 IIGDVVETKEALDAAMADLRFDAAANTIYHFV--WDRFCD----WYIELIKGNFDEETKA 696

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
             V    + Q+ ++L  F+P +  +++
Sbjct: 697 --VAGWALDQILVMLHPFMPFITEELW 721



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + DV+ R+ RL G D L+  GTD           +AG+ T++ V++     
Sbjct: 52  HIGHALDNTLQDVVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQMEAK 100

Query: 81  RDMADVLDISYDDFI 95
           +D     + S +DF+
Sbjct: 101 QDKR--TNYSREDFV 113


>gi|190891500|ref|YP_001978042.1| valyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|190696779|gb|ACE90864.1| valyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 947

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDDNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|312963226|ref|ZP_07777710.1| Leucyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282492|gb|EFQ61089.1| Leucyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 868

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 16/188 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N        R +   +D S +  + T +  ++   + L+ ++ +KG I
Sbjct: 92  KNNVAPAKWTYENIAYMKTQLRSLGLAVDWSRE--VTTCKPDYYRWEQWLFTRLFEKGVI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+L
Sbjct: 150 YRKNGTVNWDPVDQTVLANEQVIDGRGWRSGAVIEKRQIPM-------YYFKITAYADEL 202

Query: 177 LSYYESHP 184
           LS  +  P
Sbjct: 203 LSSLDDLP 210


>gi|312866233|ref|ZP_07726452.1| leucine--tRNA ligase [Streptococcus downei F0415]
 gi|311098206|gb|EFQ56431.1| leucine--tRNA ligase [Streptococcus downei F0415]
          Length = 833

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEDLDWPESIKEMQR 221


>gi|330444625|ref|YP_004377611.1| leucyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807735|gb|AEB41908.1| leucyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 820

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y+     YP+ A  H+GH       D+LAR+ R  G  VL   G D  G    + A
Sbjct: 30  KEKYYVLDMFPYPSGAGLHVGHLIGYTATDILARYKRARGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+   +N  NF+     +  SYD+     T++  ++   + L+  +  +G  Y
Sbjct: 90  IRTGTHPKLTTKKNIENFKVQLSAMGFSYDEDREFATSDAEYYHWTQKLFLYLYQQGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y  +     +++EV  G   +G Y   +    QW+       +++AY DKLL
Sbjct: 150 MADMAVNYCPQLGTVLSNEEVEDGLSIEGGYPVERRMLRQWI------LKITAYADKLL 202


>gi|300868292|ref|ZP_07112921.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
 gi|300333727|emb|CBN58105.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
          Length = 1183

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 26/186 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---NL 284
           M VW D+ +++           G +   +PA++++ G D    H  ++ + LL++   N 
Sbjct: 570 MDVWFDSGSSWAAVA------KGREELHYPAEMYLEGSDQ---HRGWFQSSLLTSVANNG 620

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P K V +HGF+L  +G K+SKSLGNV+DP  VI E G D LR + V  +    D    
Sbjct: 621 IAPYKTVLTHGFVLDEQGRKMSKSLGNVVDPAVVINEYGADVLRLW-VSSVDYSADVPLG 679

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRV 397
           K+ LK++  AD+   I N  +R +   L D+D   P   A +     E D  +L   + V
Sbjct: 680 KNILKQQ--ADVYRKIRN-TARFLLGNLHDFD---PAKNAVSYEELPELDRYMLHRMTEV 733

Query: 398 LQEIRE 403
             E+++
Sbjct: 734 FTEVKD 739



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N Q HIGHA   I+ D + R+  L G  V +  G D HG  I
Sbjct: 61  YANGQLHIGHALNKILKDTINRYQMLQGRKVRYVPGWDCHGLPI 104


>gi|290960375|ref|YP_003491557.1| valyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260649901|emb|CBG73017.1| valyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 876

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 9/179 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +T G+ +  +  + KF+  D+ + G DI+ F     + +  + +   
Sbjct: 456 VLDTWFSSGLWPFSTLGWPEQTEDLR-KFYSTDVLLTGHDIIFFWVARMMMFGLYAMDGE 514

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +P  K +   G +   +G+K+SKS GNV+DP++ +++ G DALR+ L R    G D    
Sbjct: 515 VPF-KTIALTGLVRDERGKKMSKSFGNVVDPLDWMDKYGSDALRFTLARGANPGTDVPIG 573

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           ++ ++   N   AN I N  +R   M     +G +P     + +D  IL+  +  ++++
Sbjct: 574 EEWVQASRN--FANKIWN-ATRFALMNGATVEGPLPEASKLSATDRWILARLNETVEQV 629


>gi|218514802|ref|ZP_03511642.1| valyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 283

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 34  VLDTWFSSALWPFSTLGWPDE-TPELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 88

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 89  MKDDNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 148

Query: 335 CGKD 338
            G+D
Sbjct: 149 QGRD 152


>gi|123443211|ref|YP_001007185.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166231653|sp|A1JQ25|SYL_YERE8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122090172|emb|CAL13035.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 860

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCSPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|332160863|ref|YP_004297440.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325665093|gb|ADZ41737.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 860

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREITTCSPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 RLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|288559384|ref|YP_003422870.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
 gi|288542094|gb|ADC45978.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
          Length = 1143

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 24/285 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           +IPD    ++ VWID+         Y    +    K++P D    G D  R  F++    
Sbjct: 581 RIPD----VLDVWIDSGVAGWAAL-YYPREEEMFDKWYPYDFICEGHDQTRGWFYSQLGT 635

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     P   KV  HGF+L  +G+K+SKSLGNV+ P EVIE+ G D LR++L+     
Sbjct: 636 GVIALDQAPY-NKVLMHGFVLDEEGKKMSKSLGNVVQPEEVIEKYGADVLRFYLLWACKP 694

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNL-VSRSVSMILKDYD---GMIPTPGA---FTESDE 388
             D  +  D L       + N + N+ V  +  M L ++D    ++  P A       D 
Sbjct: 695 WDDLKFVWDELNNV--KKMFNILWNVYVFSTTYMALDEFDPAKCVLDGPDANVTLRNEDR 752

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD---AQKPWELKKTNPDRA 444
            ILS  + + +E  + + +   H A   + + + E + R++      + W ++  +PD+ 
Sbjct: 753 WILSRVNSLAKEAGDAINDVHFHLATRAINNFILEDLSRWYVRLIRGRTW-VESDDPDKL 811

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               Y     +  L  L+    P L+ ++++ L    ++   +S+
Sbjct: 812 GA-YYTLYNTLNTLIHLMAPITPHLSEEVYENLVKNLDDNAVESI 855


>gi|78357482|ref|YP_388931.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123754859|sp|Q30YL0|SYL_DESDG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78219887|gb|ABB39236.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 829

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 18/187 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  N R     L  SYD    + T +  ++   ++ + K  +KG IY
Sbjct: 89  IKHDTHPAKWTYSNIDNMRSQLKRLGYSYDWRRELATCDAEYYRWEQLFFLKFMEKGLIY 148

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAYQD 174
            K     W    +    N+  +    DG  +       Q +  QW      F R+++Y +
Sbjct: 149 RKKAPQNWCPKCNTVLANEQVI----DGLCWRCDSVVEQRDLAQW------FLRITSYAE 198

Query: 175 KLLSYYE 181
           +LL+  E
Sbjct: 199 ELLADLE 205



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 26/200 (13%)

Query: 240 TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS------ANLPLP-KKV 290
           T+ G  + P D    K+W P D ++ G +    H +Y   F+ +       +L  P   +
Sbjct: 510 TSAGDNEAPFDAQALKYWLPVDQYIGGVEHAILHLLYARFFIKALRDCGYMDLDEPFANL 569

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            + G +L  G K+SKS GNV+DP E+I   G D +R F +      +D  +   G++   
Sbjct: 570 LTQGMVLMDGAKMSKSKGNVVDPTEMISRYGADTVRLFCLFAAPPERDFDWSDSGIE--- 626

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ-------EIRE 403
                 G    V+R   ++     GM P     + SD+   +    + Q       +   
Sbjct: 627 ------GASRFVNRVWRLVEDLPAGMAPMAPCSSSSDDCTGAAAKDIRQKEHATVKKAGA 680

Query: 404 NMQNQL-IHRALAQVISLVS 422
           ++QN+   + A++ V+ LV+
Sbjct: 681 DIQNRFQFNTAISAVMELVN 700


>gi|49474415|ref|YP_032457.1| valyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81646962|sp|Q6FZB1|SYV_BARQU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49239919|emb|CAF26318.1| Valyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 907

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 13/121 (10%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Q ++  W  +     +T G+  N       F+P  L V G DI+ F    W A ++   L
Sbjct: 476 QDVLDTWFSSALWPFSTLGW-PNKTTELDTFYPTSLSVTGFDIIFF----WVARMMMMGL 530

Query: 285 ------PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 P P  V+ H  +   KG K+SKS GN+IDP+E+I++   D+LR+ L    A G+
Sbjct: 531 HFMGEVPFPT-VYVHALVRDQKGAKMSKSKGNIIDPLELIDQYSADSLRFTLAVMAAQGR 589

Query: 338 D 338
           D
Sbjct: 590 D 590


>gi|325116080|emb|CBZ51634.1| putative methionine tRNA synthetase [Neospora caninum Liverpool]
          Length = 1198

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++YVW DA+  YLT  G+          +WP  L V+GKDILRFH +  PA LL A L L
Sbjct: 586 VVYVWFDAIVGYLTAAGFPAVHSRRFRTWWPPALQVLGKDILRFHGVLLPALLLGAGLSL 645

Query: 287 PKKVFSHGFIL-HKGEKISKS 306
           P+++  HG+    + +K+SKS
Sbjct: 646 PRRLLVHGWWTDGRNQKLSKS 666



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 24/99 (24%)

Query: 405  MQNQLIHRALAQVISLVSEVDRYFDAQKPWEL----------------------KKTNPD 442
            M  Q  H    Q++ L  E + + D   PW L                       + +  
Sbjct: 1049 MHTQQFHLYTRQLLRLAGEANAFIDRLAPWRLLTSSSPRVSPVSPSSLSASPPPSRGDSK 1108

Query: 443  RAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            RAS  T+L+V  E +R+ A+LL    P LA+KIF+ L V
Sbjct: 1109 RASLETILFVLCEFLRRFALLLAPLSPGLAHKIFEQLRV 1147


>gi|312793434|ref|YP_004026357.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180574|gb|ADQ40744.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 817

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 91/193 (47%), Gaps = 26/193 (13%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENM 405
                    G    ++R   + + +    +       ES  D+ +    +  ++++ E++
Sbjct: 624 ---------GCFRFLNRLWRLYI-ELKSKLADESLLGESELDDELKYRLNYTIKKVTEDI 673

Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
             +   + A++ ++ L++ +  Y       E  K N D       + ++ +R L IL+  
Sbjct: 674 GERFNFNTAISTIMELLNFLYEYK------EKGKLNKD-------LIIDTLRNLLILIYP 720

Query: 465 FVPKLANKIFDIL 477
           F P +A ++++I+
Sbjct: 721 FTPHIACELWEIM 733


>gi|83721013|ref|YP_441758.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83654838|gb|ABC38901.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 882

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 50  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 109

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 110 ANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGIA 167

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 168 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 222


>gi|239905094|ref|YP_002951833.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794958|dbj|BAH73947.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 837

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 12/196 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ARF R++G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARFKRMEGHNVLHPMGWDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +   N  + R     L  SYD    I T    ++   +  + K  +KG +Y 
Sbjct: 91  KHKLHPAAWTISNIDSMRTQLQRLGYSYDWRREIATCHPGYYVHEQRFFLKFLEKGLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W         N+  +    DG  +      VQ  + E +F R++ Y ++LL+  
Sbjct: 151 KHSPQNWCETCGTVLANEQVI----DGCCWRCDQAVVQ-KDLEQWFLRITDYAEELLADL 205

Query: 181 E----SHPEFILPIER 192
           +      PE +L ++R
Sbjct: 206 DQLVGGWPERVLTMQR 221



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G ++  G K+SKS GNV+DP  +I + G D +R F++      KD  +   G++  
Sbjct: 573 LLTQGMVIKDGSKMSKSKGNVVDPDLMIGKYGADTVRVFILFAAPPEKDLEWSDTGIE-- 630

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMI-PTPGA 382
                  G    +SR   ++ ++  G++ P P  
Sbjct: 631 -------GASRFLSRLWRLVTEELSGVLTPMPAC 657


>gi|89055968|ref|YP_511419.1| valyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88865517|gb|ABD56394.1| valyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 1029

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYW 275
           +K+  DP  ++  W    ++ L   G L  P+ +    +++P    + G DI+ F    W
Sbjct: 591 VKLRRDPD-VLDTW---FSSGLWPIGTLGWPEQTPELDRYFPTSTLISGFDIIFF----W 642

Query: 276 PAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++   L +      + V+ H  +   KG K+SKS+GNV+DP+E+I+E G DALR+ L
Sbjct: 643 VARMMMMQLAVVDDVPFRDVYVHALVRDEKGRKMSKSIGNVLDPLELIDEYGADALRFTL 702

Query: 330 VREIACGKD 338
               A G+D
Sbjct: 703 TAMAAMGRD 711



 Score = 44.7 bits (104), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 13/68 (19%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA+   + DVL R+HR+ G D L+  GTD           +AG+
Sbjct: 38 SIMIPPPNVTGVLHVGHAFNNTLQDVLTRWHRMRGFDTLWQPGTD-----------HAGI 86

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 87 ATQMVVER 94


>gi|319404814|emb|CBI78415.1| Leucyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 874

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 8/183 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 32  EHEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V  KV+   N +  R     L  S D   +F  T +  ++   ++L+     KG I
Sbjct: 92  MQNKVHPKVWTYDNIKVMRKQLQQLGFSLDWSREFA-TCDVDYYHRQQMLFLDFYQKGLI 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V    DG+ + +    V+  E   +FF++S + D LL+ 
Sbjct: 151 ARQVAKVNWDPVDQTVLANEQV---VDGRGWRS-GALVEQRELTQWFFKISDFSDDLLAG 206

Query: 180 YES 182
            E+
Sbjct: 207 LET 209



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 24/202 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
           + I YV +D     L T G + +      K W  PAD+ ++ KD  R       A+ L+ 
Sbjct: 568 KMIGYVSVDEPFKGLFTQGMVVHETYQDEKGWVSPADVAIVEKDGKRH------AYKLT- 620

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                +     G I    EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + 
Sbjct: 621 ----DQSEVRIGSI----EKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPERDVIWS 672

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G++          +  LV+ S   +LK+        GA  E    +     R L  + 
Sbjct: 673 ESGIEGAHR--FVQRVWRLVALSAP-VLKEAKSCAGQQGAALE----LSKAAHRTLCAVE 725

Query: 403 ENMQNQLIHRALAQVISLVSEV 424
           ++++    +RA+A++  L++ +
Sbjct: 726 DDLEKLAFNRAVARLYELLNVI 747


>gi|325129574|gb|EGC52398.1| isoleucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 929

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE    +       H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|300118071|ref|ZP_07055819.1| isoleucyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724382|gb|EFI65076.1| isoleucyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 525

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 15/227 (6%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD+   G D  R  F+++   + L +  +P  K+V S G +L  +G+K+SKS GN +D
Sbjct: 34  FPADVIAEGIDQTRGWFYSLLAVSALYTGKVPY-KRVLSLGHVLDEEGQKMSKSKGNALD 92

Query: 313 PIEVIEEVGVDALRY-FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-L 370
           P++++ + G DALR+  LV         F ++  L+ +  +   + + N+ S  V    L
Sbjct: 93  PVDLVGKFGADALRWALLVDSAPWNAKRFSERTVLEAK--SKFVDTLVNVYSFYVLYANL 150

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF-- 428
            +Y+         T+ DE +LS      +++R  + +     A  ++ +LV EV  ++  
Sbjct: 151 DEYNPNETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVR 210

Query: 429 -DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKI 473
               + WE    N ++A+   Y T+ +V+  ++ L+  F P +A  I
Sbjct: 211 RSRNRFWE-SGMNAEKAAA--YETLHDVLVTISKLIAPFTPFVAEDI 254


>gi|146308801|ref|YP_001189266.1| leucyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145577002|gb|ABP86534.1| leucyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 906

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 19/243 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 68  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAAM 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 128 KNQVAPAKWTYENIAYMKSQLKSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIYR 187

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LLS
Sbjct: 188 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLS 240

Query: 179 Y---YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIMYVW 231
                +  PE +  ++R     SF    + D  ++    D  +K+    PD      YV 
Sbjct: 241 SLDELDGWPEQVKTMQRNWIGKSFGADIVFDYDVASIGIDGQLKVYSTRPDTLMGATYVA 300

Query: 232 IDA 234
           + A
Sbjct: 301 VAA 303


>gi|322370215|ref|ZP_08044777.1| valyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550551|gb|EFW92203.1| valyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 872

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 21/266 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL----LSA 282
           +M  W+D+    L  +G+ +  D    +F P  L   G DI+R  A Y    L    L+ 
Sbjct: 448 VMDTWMDSSITPLHISGWPE--DIELDEFEPVALRPQGHDIIRTWAFY--TLLRVGELTG 503

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
             P  + + +       G K+SKS GNV+ P + ++E G D++R  LV     G D  F 
Sbjct: 504 ERPWDEILINGMVFGPDGNKMSKSRGNVVTPTDAVDEYGADSVRQALVLGGQPGSDVQFQ 563

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQ 399
            K+       +     I N++  S +     +D   P  +  A+ ++D  ILS  S   +
Sbjct: 564 PKEATSA---SRFLTKIWNILQFSENH----FDENTPEISDPAYRDADRWILSRLSHTAE 616

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            + ++M+     RAL  +   V E   D Y +  K   L +  P   +   +     +  
Sbjct: 617 SVSDDMKRYRYDRALRTLREFVWEDLADDYLELVKG-RLYEGRPGERNAARHALYTCVSS 675

Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483
           +  +L  F P  + +++  L   +E+
Sbjct: 676 VVRMLSPFSPFFSEEVYSYLPGTEES 701



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGV 67
          I T   YP  + HIGH  +    D  AR+HRL G +VLF  G D HG     K  +N G+
Sbjct: 37 IDTPPPYPTGRLHIGHGLQWSYIDFAARYHRLRGEEVLFPQGWDCHGLPTEVKVEENHGI 96


>gi|312622508|ref|YP_004024121.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202975|gb|ADQ46302.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 817

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 92/200 (46%), Gaps = 40/200 (20%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 K---------RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                     R+  +L N + +             D +I      +E D+ +    +  +
Sbjct: 624 GCFRFLNRLWRLYIELKNKLAD-------------DSLI----GESELDDELRYRLNYTI 666

Query: 399 QEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +++ E++  +   + A++ ++ L++ +  Y       E  K N D       +  + +R 
Sbjct: 667 KKVTEDIAERFNFNTAISTIMELLNFLYEYK------ECGKLNKD-------LIKDTLRN 713

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L IL+  F P +A ++++I+
Sbjct: 714 LLILIYPFTPHIACELWEIM 733


>gi|312127683|ref|YP_003992557.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777702|gb|ADQ07188.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 817

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 92/202 (45%), Gaps = 44/202 (21%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 K---------RVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                     R+  +L N +   NL+  S                   E D+ +    + 
Sbjct: 624 GCFRFLNRLWRLYIELKNKLADDNLIGES-------------------ELDDELRYRLNY 664

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ E++  +   + A++ ++ L++ +  Y       E  K N D       + ++ +
Sbjct: 665 TIKKVTEDIGERFNFNTAISTIMELLNFLYEYK------ENGKLNKD-------LIIDTL 711

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           R L IL+  F P +A ++++I+
Sbjct: 712 RNLLILIYPFTPHIACELWEIM 733


>gi|300113162|ref|YP_003759737.1| leucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539099|gb|ADJ27416.1| leucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 819

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMKGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N  + R     L  +YD    + T +  ++   + L+ K+  KG +YK
Sbjct: 92  QNRVPPAQWTYENIGHMRKQLKRLGFAYDWSRELATCQPDYYHWEQWLFTKLFAKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY ++LL+  +
Sbjct: 152 KTALVNWDPVDQTVLANEQVI---DGRGWRS-GALVERREIPQWFLKITAYGEELLTSLD 207

Query: 182 ---SHPEFILPIER 192
                PE +  ++R
Sbjct: 208 ELTGWPEQVRAMQR 221



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +  +W P D ++ G +    H +Y   F        L+ ++ P    + + G +L  G K
Sbjct: 518 RGDYWLPVDQYIGGIEHAVLHLLYARFFHKVMRDMGLVRSDEPF-THLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP  +IE  G D  R F++
Sbjct: 577 MSKSKGNTVDPQALIEHYGADTARLFIM 604


>gi|290579735|ref|YP_003484127.1| putative leucyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996634|dbj|BAH87235.1| putative leucyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 833

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 14/197 (7%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G  VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYSVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  QN   F+     L  SY  D  I TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGHDPADFTAQNIATFKRQIKSLGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 SYYE--SHPEFILPIER 192
              E    PE I  ++R
Sbjct: 205 EDLEDLDWPESIKDMQR 221


>gi|27262334|gb|AAN87448.1| Isoleucyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 754

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 35/273 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    A       
Sbjct: 355 IMDVWFDSGSSHQAVLETREN------LHFPADLYLEGSDQHRGWFNSSLSTAVATKGTA 408

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGKD 338
           P  K V +HGF++  +G K+SKSLGN +DP+ VI+++G D LR ++       ++A   +
Sbjct: 409 PY-KAVLTHGFLVDEQGRKMSKSLGNGVDPLAVIKDMGADILRLWVASVDYRNDVAVSPN 467

Query: 339 GFYD-KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
                 DG +K  N      +GN+           ++ M       TE D   +    ++
Sbjct: 468 ILRQIADGYRKIRNT-FRYFLGNIADFDPKADTVPFEQM-------TELDRWAMMALHKL 519

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDR---YFDAQKP--WELKKTNPDR--ASTVLYV 450
           +Q +    +N   H  +   I     VD    Y D  K   +     +P+R  A TVLY+
Sbjct: 520 IQRVTTACRNYEFH-VVYHAIHNFCAVDMSALYLDIIKDRLYASPAKSPERRSAQTVLYL 578

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           T +    L  +L  F+   A +++  L  A E 
Sbjct: 579 TADA---LVRMLAPFISFTAEEVWGYLPGAKEQ 608


>gi|91977051|ref|YP_569710.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683507|gb|ABE39809.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 968

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D       +++P ++ V G DI+ F    W A ++   L  
Sbjct: 511 VLDTWFSSALWPFSTLGWPDE-TSELERYYPTNVLVTGFDIIFF----WVARMMMMGLHF 565

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               P P  V+ H  +   KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D
Sbjct: 566 KNDVPFPT-VYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRD 623



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 55  SIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD-----------HAGI 103

Query: 68  TTKVFVDQN 76
            T++ V++ 
Sbjct: 104 ATQMVVERQ 112


>gi|328782776|ref|XP_624911.2| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           isoform 2 [Apis mellifera]
          Length = 866

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 4/142 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI +   Y +   H+GH     I+D +ARF+R+ G +VL   G D  G     AA
Sbjct: 63  EKKKFYILSMFPYSSGMLHMGHVRVYTISDTIARFYRMKGYNVLHPIGWDAFGLPAENAA 122

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N +N R+   +L+ S+  D  I T +  ++   + L+ K+ +K  +Y
Sbjct: 123 IEKQINPIEWTYDNIKNMRNQLKLLNYSFDWDREITTCDPEYYKFTQELFLKLFEKDLVY 182

Query: 121 -KGCYSGWYSLRDEAYYNDDEV 141
            K  +  W  + DE    +++V
Sbjct: 183 RKESFVNWDPI-DETVLAEEQV 203


>gi|313680233|ref|YP_004057972.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152948|gb|ADR36799.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 866

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 79/402 (19%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY--------YESHPEFILPIE 191
           E ++G D   + A+    + +EEEGY      YQ  L +         Y   P++ L ++
Sbjct: 308 ERFRGLD--RFEARKAVAKALEEEGYLRAAEPYQIALATCDRCGTAVEYALFPQWWLKMK 365

Query: 192 R-RNEVISFVKSG-------------------LKDLSLSRKTFDWGIKIP---------- 221
              +EV+  +K G                   ++D ++SR+ + WG +IP          
Sbjct: 366 PLADEVLPKLKEGDIKFYPERWRKVNIDWFENIRDWNISRQLW-WGHQIPAWYCPEGHVT 424

Query: 222 --------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                   +DP+               ++  W  +    L+T G+ ++ +  +A F+P  
Sbjct: 425 VPEPERFDEDPKECAVCGSTELERDPDVLDTWFSSALWPLSTLGWPEDTEDYRA-FYPTS 483

Query: 260 LHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
           + V G DIL      +    +      P  + V  HG +L  KG+K+SKS GNV+DP+E+
Sbjct: 484 VLVTGYDILFLWVSRMEVSGYHFDGRRPF-EAVMLHGLVLDEKGKKMSKSKGNVVDPLEL 542

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G DALR+ L+     G+D  +D+  ++  +  + AN + N  +R V M  + ++  
Sbjct: 543 VEQYGADALRFALIHLATGGQDIRFDRRWVE--MGRNFANKLWN-AARFVFMNREGFEAK 599

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWE 435
              P        + L    R + ++ +  +  L  R + Q++   SE  D Y +A KP  
Sbjct: 600 TDEPTLADRWMAARLREGIRNITQLYDAYELALASREVYQLV--WSEFCDWYIEAAKP-A 656

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+  N    +  L      +  L  LL  F+P + ++I+  L
Sbjct: 657 LRAGN----AATLRGLETALEALLKLLHPFMPFVTSEIYTAL 694



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA +  + D L R+ RL G + L+  GTD           +AG+ T+V V++
Sbjct: 51 HMGHALDNALQDALTRYKRLRGYEALWLPGTD-----------HAGIATQVVVER 94


>gi|221213180|ref|ZP_03586155.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221166632|gb|EED99103.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 864

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|254414971|ref|ZP_05028734.1| valyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196178118|gb|EDX73119.1| valyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 917

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGK 265
           L  ++  F   +K+  DP  ++  W  +     +T G+    PD     ++P  + V G 
Sbjct: 447 LEKAKSQFGESVKLIQDPD-VLDTWFSSGLWPFSTMGWPQQTPD--LETYYPTTVLVTGF 503

Query: 266 DILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           DI+ F    W A +       +  +P  + V+ HG +     +K+SKS  N IDP+ +IE
Sbjct: 504 DIIFF----WVARMTMMGGYFTDQMPF-QTVYIHGLVRDENNKKMSKSANNGIDPLLLIE 558

Query: 319 EVGVDALRYFLVREIA-CGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + G DALRY L+RE+A  G+D   + +    +  + + +    N +  +   ++ + DG 
Sbjct: 559 KYGTDALRYTLIREVAGAGQDIRLEYNRQTDESASVEASRNFANKLWNAARFVMMNLDGK 618

Query: 377 IP-TPGAFTESDESILSVCSR 396
            P   G+    +   L +C R
Sbjct: 619 SPQVLGSPLAQERDTLELCDR 639


>gi|189083244|sp|Q2SZ91|SYL_BURTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 864

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|161525901|ref|YP_001580913.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349380|ref|YP_001945008.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687066|sp|A9AHA9|SYL_BURM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160343330|gb|ABX16416.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333402|dbj|BAG42472.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 864

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|254673172|emb|CBA08035.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135619|gb|EGC58236.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 929

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+ +++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|222529245|ref|YP_002573127.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456092|gb|ACM60354.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 817

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 32/196 (16%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P +++E  G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIVERYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 KRVNADLANGIGNLVSR--SVSMILKDY---DGMIPTPGAFTESDESILSVCSRVLQEIR 402
                    G    ++R   + + LKD    D +I      +E D+ +    +  ++++ 
Sbjct: 624 ---------GCFRFLNRLWRLYIELKDKLADDNLI----GESELDDELRYRLNYTIKKVT 670

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E++  +   + A++ ++ L++ +  Y       E  K N D       +  + +R L IL
Sbjct: 671 EDIAERFNFNTAISTIMELLNFLYEYK------ECGKLNKD-------LIKDTLRNLLIL 717

Query: 462 LQAFVPKLANKIFDIL 477
           +  F P +A ++++I+
Sbjct: 718 IYPFTPHIACELWEIM 733


>gi|157369450|ref|YP_001477439.1| leucyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980081|sp|A8GB21|SYL_SERP5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157321214|gb|ABV40311.1| leucyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 860

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCDPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|83589714|ref|YP_429723.1| isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725741|sp|Q2RK59|SYI_MOOTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83572628|gb|ABC19180.1| Isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 930

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E    V  GLK      K F    K  D    IM VW D+ +++         P+ +   
Sbjct: 500 EAGELVPPGLKCPECGSKEFR---KETD----IMDVWFDSGSSHAAVLA--TRPELA--- 547

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
            WPADL++ G D  R  F++    A       P  ++V +HGF++  +G K+SKSLGN I
Sbjct: 548 -WPADLYLEGSDQHRGWFNSSLSTAVATRGRAPY-RQVLTHGFLVDEEGRKMSKSLGNGI 605

Query: 312 DPIEVIEEVGVDALRYFLV 330
           DP +VI + G D LR ++ 
Sbjct: 606 DPADVIRQRGADVLRLWVA 624



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N   H+GH    I+ D++ ++H ++G D  +  G D HG  I + 
Sbjct: 45  RGKPKFILHDGPPYANGHLHLGHTLNKILKDIIIKYHSMNGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  A-QNAGVTTKVFVDQNSRN-FRDMA-DVLDISYDDFIR------------TTEKRHHDTC 106
           A +N G+          RN  RD A   ++I  ++F R            T E  +    
Sbjct: 105 AIKNLGLNRHAVDVVEFRNRCRDYALKYVNIQREEFKRLGVRGDWEHPYLTLEPEYEAIQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + EV  G +
Sbjct: 165 IGIFGEMAKKGYIYKGLKPVYWCTDCETALAEAEVEYGEE 204


>gi|313623483|gb|EFR93684.1| leucyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 803

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y+   +  W         N++ +   ++   +     P+ QWM       +++AY D+L
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGFPVFRKPMRQWM------LKITAYADRL 201

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 202 LDDLELVDWPENIKDMQR 219



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L +  
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVSEE 637

Query: 359 GNLVSR----SVSMILKDYDGMIPT 379
           G L  +    + + + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANTNLEKAYHHMVKT 662


>gi|284161561|ref|YP_003400184.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011558|gb|ADB57511.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 474

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 54/328 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++Y+    AY  +  HIGHA   +  DVL R+   +G +V++     +   KI + A N 
Sbjct: 26  RMYVCGITAYDYS--HIGHARTFVFFDVLRRYLEYEGHEVIYVQNFTDVDDKIVRRAVNE 83

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K   ++    F      L++   D++        D  + + K I            
Sbjct: 84  GKTQKEIAEKFISEFLKDMSALNVKMPDYMPKVTDHIQDIVQAVQKLI------------ 131

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
                 +  Y  + E   G D  ++      V   E  G   +LS    + L+ +   P 
Sbjct: 132 ------ELGYAYEVENEHGKDVYFH------VPAFESYG---KLSGMSLEELNRHRIEPN 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFD--WGIKIPDDPQYIMYVWIDALTNYLTTTG 243
              P +R  +  +  KS  +D   ++  FD  WG   P         W   +   + +  
Sbjct: 177 ---PKKRDVKDFALWKSAKEDDFKAKAVFDSPWGYGRPG--------W--HIECSVMSAK 223

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH-GFILHKGEK 302
           YL           P D+H  GKD++  H     A   +     P + + H  F++ KGEK
Sbjct: 224 YLG---------VPFDIHGGGKDLIFPHHENERAQSYALFGVEPVRYWIHCDFVMIKGEK 274

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGN++   +V+   G + LRYFL+
Sbjct: 275 MSKSLGNIVKIRDVLNVYGGEVLRYFLL 302


>gi|261380481|ref|ZP_05985054.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796729|gb|EFC52076.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 930

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 647

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 648 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 696

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 697 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 752

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 753 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 789



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|209964474|ref|YP_002297389.1| valyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957940|gb|ACI98576.1| valyl-tRNA synthetase ValS [Rhodospirillum centenum SW]
          Length = 898

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 16/133 (12%)

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFH 271
           F  G++I  D   ++  W  +     +T G+   P+ +    +++P D+ V G DI+   
Sbjct: 458 FGEGVEITRDAD-VLDTWFSSALWPFSTLGW---PEKTPELDRYYPGDVLVTGFDII--- 510

Query: 272 AIYWPAFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
             +W A ++   L     +P + V+ H  +   KG+K+SKS GN+IDP+ V+++ G DAL
Sbjct: 511 -FFWVARMMMMGLHFMGDVPFRTVYIHALVRDEKGQKMSKSKGNIIDPLTVVDKYGADAL 569

Query: 326 RYFLVREIACGKD 338
           R+ L    A G+D
Sbjct: 570 RFTLAAMAAQGRD 582



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + DVL RFHR+ G D L+  G D           +AG+ T++ V++N    
Sbjct: 50  HMGHALTFTLQDVLVRFHRMRGQDALWQPGQD-----------HAGIATQMVVERNLA-- 96

Query: 81  RDMADVLDISYDDFI 95
           ++    LD+  + F+
Sbjct: 97  KEGVSRLDLGREKFV 111


>gi|206901325|ref|YP_002251143.1| isoleucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740428|gb|ACI19486.1| isoleucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 975

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)

Query: 280 LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L  N P  K V     +L  KGEK+SK  GNV+DP  ++ + G DALR+++         
Sbjct: 566 LVFNEPAYKNVLVTELVLDEKGEKMSKHKGNVVDPWLILNKYGADALRWYIFTVSPPWVP 625

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT------ESDESILS 392
             +  D + + +   L   + N V  S   I  + DG  P   + +       SD+ I+S
Sbjct: 626 LRFAPDAVNEALKKFLLT-LWNTV--SFFSIYAEIDGYDPNQYSVSLKELEDLSDKWIIS 682

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLY-V 450
             + ++ +++ +M+N    +A   + S V  ++  ++         K+  D+     Y V
Sbjct: 683 RLNSLIAKVKNDMENFNATQAARAIQSFVIDDLSNWYIRLNRERFWKSEKDKDKWAAYTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIF-DILFVADEN 483
           T  VI++L  L+  F+P  A KI+ +++ VA++N
Sbjct: 743 TYTVIKELTKLIAPFIPFTAEKIYQEVIRVAEKN 776



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFVDQ 75
           N +PH GH    I  D+  R+  + G  V    G D HG  +  +  +  G+ +K  +++
Sbjct: 51  NGKPHAGHVLPRIYKDLFPRYKTMRGYYVPRKAGWDTHGLPVELEVEKELGLNSKQDIEK 110

Query: 76  ----------------NSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                             + +R   + +   I  D+   T    + ++   L KKI +KG
Sbjct: 111 YGIEEFNKKCKESVFRYEKEWRRFTERIGFWIDMDNPYITLSNDYIESVWWLLKKIWEKG 170

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG     +  R E   +D EV +G
Sbjct: 171 LLYKGYKIVPWCPRCETALSDHEVAQG 197


>gi|134097970|ref|YP_001103631.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008560|ref|ZP_06566533.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910593|emb|CAM00706.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 877

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D+    + K++P  + V G DIL     +W A ++   L  
Sbjct: 451 VLDTWFSSGLWPFSTMGWPDDTADLR-KYYPTSVLVTGYDIL----FFWVARMMMMGLYA 505

Query: 285 ----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  + +  HG +    G+K+SKS GN +DP+E ++  G DALR+ L R    G D 
Sbjct: 506 MDGEPPFRVIALHGMVRDPHGKKMSKSAGNTVDPLEWMDNYGTDALRFTLARGANPGADS 565

Query: 340 FYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              ++ +   +     L N      ++   M        +P     T++D  IL    RV
Sbjct: 566 PISEEWVAGSRSFCTKLFN-----ATKFAMMNGARVPAALPPRDELTDADRWILDRADRV 620

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + E+ E +++    +A   +     +   D Y +  K  +L +   DRA     V   V+
Sbjct: 621 VSEVDELLEDFQFAKATEALYHFTWDEFCDWYLELSKV-QLDEQG-DRAERTRDVLGHVL 678

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  LL   +P +   ++  L
Sbjct: 679 DVLLRLLHPTIPYITETLWTTL 700



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 5  EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          +K   S  I  PN     HIGHA+E  + DVL R  R+ G D L+  G D
Sbjct: 42 DKPPFSIVIPPPNVTGSLHIGHAFEHTLMDVLTRRRRMQGYDALWLPGMD 91


>gi|254253255|ref|ZP_04946573.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895864|gb|EAY69744.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 864

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     + ++ D    I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIEYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|300871449|ref|YP_003786322.1| valyl tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689150|gb|ADK31821.1| valyl tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 892

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 30/238 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P    V G DIL F    W A ++ A      ++P  K V+ +G I  K G K+SKSL
Sbjct: 486 FYPTTALVTGYDILFF----WVARMIMAGTHFMNDVPF-KDVYLNGLIRDKIGRKMSKSL 540

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           GN IDPIE+I+E G DA R+ L    +  G+D + D++  K  +    AN I N      
Sbjct: 541 GNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFK--MGGKFANKIYNSAKYIF 598

Query: 367 SMI-----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             I     +KD D            D+ ILS   + ++   + ++      A   +    
Sbjct: 599 GNIEDNANIKDLDTY-----TLENKDKWILSRLQKAIESTTQKLKEYRFDEASQTIYKFY 653

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D Y +  K ++LK  +  +    + V + V+ +   ++  F+P +  +I+  L
Sbjct: 654 WNEFCDWYIEISK-FDLK--DESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYSNL 708


>gi|295399732|ref|ZP_06809713.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978135|gb|EFG53732.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 923

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLVERDDLQR------PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E++G D LR ++
Sbjct: 576 PY-KAVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWV 620



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV--- 71
           Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A    GV  K    
Sbjct: 58  YANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALTKKGVDRKSMSV 117

Query: 72  ---------FVDQNSRNFRDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
                    +  +   N R+    L +  D +    T  R ++  +I ++ +++ KG IY
Sbjct: 118 AEFRKLCEQYAYEQINNQREQFKRLGVRGDWENPYITLTREYEAQQIKVFGEMAKKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPVYWSPSSESALAEAEI 198


>gi|224823411|ref|ZP_03696520.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603866|gb|EEG10040.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 872

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  +   YP+ + H+GH     I DVLARF R  G +VL   G D  G     AA 
Sbjct: 32  RPKYYALSMFPYPSGKLHMGHVRNYTITDVLARFKRFQGYNVLQPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +G     +   N    +   D L  + D    + T +  ++   + L+ K+ +KG IYK
Sbjct: 92  KSGGAPAAWTYANIDYMKKQLDSLGFALDWERELATCKPDYYRWEQWLFTKLFEKGVIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D     +++V    DG+ + +    V+  E   Y+F ++ Y D+LL+
Sbjct: 152 KNGVVNWDPVDHTVLANEQVI---DGRGWRSGAL-VEKREIPMYYFAITQYADELLT 204



 Score = 37.0 bits (84), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 41/249 (16%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y D P+GSK    P D+ V+ +D            +++A   +  +  + G I  
Sbjct: 582 VCETFYRDLPNGSKDWIAPQDV-VLERDG--------KGKIIAATHRVDGQPVTVGGI-- 630

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS  N +DP E IE+ G D  R F++      +   +   G++         G 
Sbjct: 631 --EKMSKSKNNGVDPQEFIEKYGADTARLFMMFAAPPEQSLEWSDAGVE---------GA 679

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV---LQEIRENM-QNQLIHRAL 414
              + R   ++    DG +       E D  +  +  ++   +Q++ ++  + Q  + A+
Sbjct: 680 FRFLKRLWKVVKDHADGGVVAAYRGGELDAGLKELRFKLHGTIQKVADDYGRRQQFNTAI 739

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKI 473
           A V+ L++  D+               DR+S     V  EV+    ILL   VP + + +
Sbjct: 740 AAVMELLNTYDK--------------ADRSSDAGRAVAQEVLEAAVILLSPIVPHITDAL 785

Query: 474 FDILFVADE 482
           ++ L    E
Sbjct: 786 WNALQPGSE 794


>gi|47459374|ref|YP_016236.1| leucyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458704|gb|AAT28025.1| leucyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 630

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+    H+GH       D+++R+ RL G DVL   G D  G    +
Sbjct: 26  KSKDKFYALDMFPYPSGSGLHVGHPEGYTATDIISRYKRLKGFDVLHPIGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
            A ++G   + F  +N  NFR     L  S+D    + TT+  ++   + ++K+I  KG
Sbjct: 86  YALSSGKHPQPFTLKNIENFRRQLKSLGFSFDYEKEVNTTDPSYYRWTQWIFKQIYKKG 144



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHK-GEKIS 304
           +K+ P DL++ G++    H +Y   W   L    +   K    K+ + G IL K G+K+S
Sbjct: 346 SKWLPVDLYIGGQEHAVLHLLYARFWHKILYDLKIVPTKEPFQKLINQGMILGKDGQKMS 405

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KSLGNV++P E+I+  G D LR +
Sbjct: 406 KSLGNVVNPDEIIQNFGADTLRVY 429


>gi|77920049|ref|YP_357864.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|84029525|sp|Q3A1R3|SYI_PELCD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77546132|gb|ABA89694.1| Isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 927

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++      LDN D      WPADL++ G D  R  FH+    A + +  L
Sbjct: 531 ILDVWFDSGVSH---AAVLDNRDYLS---WPADLYLEGSDQHRGWFHSSLL-ASVGTREL 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              K V +HGF++  KG+K+SKS+GNV+ P EVI++ G + LR ++  +
Sbjct: 584 TPYKSVLTHGFVVDGKGKKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQ 632



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 21/139 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           + R    +     Y N   HIGHA   I+ D++ +  R+ G    +  G D HG  I   
Sbjct: 45  RTRPNFTLHDGPPYANGHIHIGHALNKILKDIVLKSRRMKGFYAPYVPGWDCHGLPIELM 104

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-----------TTEKRHHD- 104
              K  +     TKV + +  R + D    + I  ++F R            T   H++ 
Sbjct: 105 VDKKLGKKKRDMTKVEIRKECRVYADQW--VKIQSEEFERLGVMGEWDRPYLTMTHHYEA 162

Query: 105 -TCRILWKKISDKGDIYKG 122
            T R L  +  +KG ++KG
Sbjct: 163 VTAREL-ARFVEKGGLFKG 180


>gi|167580573|ref|ZP_02373447.1| leucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 864

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|270159542|ref|ZP_06188198.1| leucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269987881|gb|EEZ94136.1| leucyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 795

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     I DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 3   KEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  +N  + +     L  +YD    I T    ++   +  + ++ +KG +YK
Sbjct: 63  KNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREISTCTPEYYRWEQWFFIRLFEKGLVYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY D+LLS  +
Sbjct: 123 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITAYADELLSSLD 178

Query: 182 SHPEF 186
           S  E+
Sbjct: 179 SLDEW 183



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D +V G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 489 RAKYWTPVDQYVGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 547

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNV+DP  +I   G D  R F++
Sbjct: 548 MSKSVGNVVDPNHLINTYGADTARLFVM 575


>gi|297544853|ref|YP_003677155.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842628|gb|ADH61144.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 932

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSSHAAVLQ--THPDLK----WPAELYLEGSDQHRGWFQSSLLTSVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  +G K+SKSLGN +DP +VI+E G D LR + V
Sbjct: 583 PY-KNVLTHGFVVDGEGRKMSKSLGNGVDPADVIKEYGADILRLWTV 628


>gi|261401844|ref|ZP_05987969.1| isoleucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208001|gb|EEZ74456.1| isoleucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 929

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVLKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  Q     +++    
Sbjct: 696 RRLQERVAGDFYPRYTFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTQADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|221202477|ref|ZP_03575508.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208066|ref|ZP_03581071.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171969|gb|EEE04411.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177650|gb|EEE10066.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 864

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|116327605|ref|YP_797325.1| isoleucyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331784|ref|YP_801502.1| isoleucyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280479|sp|Q04QS6|SYI_LEPBJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122284598|sp|Q053V3|SYI_LEPBL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116120349|gb|ABJ78392.1| Isoleucine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125473|gb|ABJ76744.1| Isoleucine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 914

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 14/108 (12%)

Query: 227 IMYVWIDA-LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I+ VW D+ ++N+       D P        PADL++ G D  R  F +  WP+  L   
Sbjct: 528 ILDVWFDSGVSNFSVLGERKDEP--------PADLYLEGSDQHRGWFQSSLWPSMALRG- 578

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI-EVIEEVGVDALRYFL 329
           +P  K V +HG++L  KG  +SKSLGN IDP  ++I+  G D LR ++
Sbjct: 579 IPPYKAVLTHGYVLDEKGRAMSKSLGNGIDPTADIIQVYGADILRLWV 626


>gi|308273587|emb|CBX30189.1| Leucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 835

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 8/180 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +K Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     
Sbjct: 1   MSPGKKYYLLEMFPYPSGKIHMGHVRNYTIGDVVARYKRMQGFNVLHPMGWDAFGMPAEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA         +  +N    R     +  SY  D  I T +  ++   + L+ K+ +KGD
Sbjct: 61  AAIANKTHPAAWTYENIDYMRKQLKRMGFSYDWDREITTCKPEYYRWEQWLFLKMYEKGD 120

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y K  +  W         N ++V  G   +          W     +FFR++ Y + LL
Sbjct: 121 AYRKESFVNWCDSCQTVLAN-EQVEAGMCWRCGKQVRQKKLWQ----WFFRITDYAEDLL 175


>gi|301299745|ref|ZP_07205994.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852652|gb|EFK80287.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 805

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 30/158 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K W P +L+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 514 DYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSN 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFY------------ 341
            EK+SKS GNV++P +++E+ G D LR +      L   I   ++G              
Sbjct: 574 HEKMSKSKGNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGLGGAYKFINRVWNL 633

Query: 342 ---DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              + D L+ RV     + +  + + +V  + +DY+ M
Sbjct: 634 LIDENDNLRDRVTTINNHDLDKIYNETVKKVTEDYEAM 671


>gi|289578630|ref|YP_003477257.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528343|gb|ADD02695.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 932

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSSHAAVLQ--THPDLK----WPAELYLEGSDQHRGWFQSSLLTSVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  +G K+SKSLGN +DP +VI+E G D LR + V
Sbjct: 583 PY-KNVLTHGFVVDGEGRKMSKSLGNGVDPADVIKEYGADILRLWTV 628


>gi|271968521|ref|YP_003342717.1| valyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270511696|gb|ACZ89974.1| valyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 861

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D      AKF+P  + V G DIL F       F + A
Sbjct: 442 DPD-VLDTWFSSGLWPFSTLGWPDKTP-ELAKFYPTSVLVTGYDILFFWVARMMMFGIYA 499

Query: 283 --NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               P  + V  HG +  + G+K+SKS GNV+DP++ +E  G DA R+ L+R    G D
Sbjct: 500 MDGRPPFRTVALHGMVRDQYGKKMSKSFGNVVDPLDWVERFGADATRFTLLRGANPGSD 558


>gi|219852654|ref|YP_002467086.1| valyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546913|gb|ACL17363.1| valyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 863

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W+D+  + +  TG+    DG+ K   +PA +   G DI+R  A Y    A  L+  
Sbjct: 449 VLDTWMDSSISVMNVTGW----DGTGKPAHFPAQIRPQGHDIIRTWAFYSILRAVALTGG 504

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  +++  +G +L + G K+SKS GN+I P E+I + G D LR +     A G D  ++
Sbjct: 505 APW-EEILVNGMVLGEDGFKMSKSRGNIIAPEEIICKYGADGLRQWAAAGAATGSDIMFN 563

Query: 343 KDGL--KKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVL 398
            + +    R    L N     ++R V M L   +Y    PT      +D  + +  +  +
Sbjct: 564 WNDVVAASRFQTKLWN-----ITRFVVMQLDRAEYRHQEPT----VLADRWLSAKLAATV 614

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPDRASTVLYVTVEVI 455
            E+   M      RAL  +     EV  D Y +  K     +    D A + L  T++  
Sbjct: 615 AEVTAAMDAYQFDRALRAIREFAWEVLADEYIELVKGRLYAEGEGRDSACSTLATTLDA- 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  LL  F+P  A + F  +
Sbjct: 674 --LCRLLAPFIPYFAEECFSAI 693



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           + +  I T   YP    HIG+A      D +AR+ R++G +V+F  G D HG     K  
Sbjct: 37  KPQFIIDTPPPYPTGNFHIGNALNWCYIDFIARYRRMNGYNVMFPQGWDCHGLPTEVKVE 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G+T     D     FR M   L I   + +R T +R
Sbjct: 97  ETHGITKN---DVPREEFRRMCRELTIGNIEKMRATMRR 132


>gi|323341519|ref|ZP_08081759.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091057|gb|EFZ33689.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 804

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+ Q  H+GH       D+++R  R+ G DVL   G D  G    + 
Sbjct: 29  DKKKFYALDMFPYPSGQGLHVGHPEGYTATDIISRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALKTGNSPREFTKKNINNFRRQIKSLGLSYDWDREVNTTDPSYYKWTQWIFEQMYKKGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFWPA-DLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HK 299
           D  K K W A DL+V G +    H +Y   W  FL    +   K+ F    + G IL + 
Sbjct: 514 DYDKLKHWMAVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGNN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++E+ G D LR + +          + +DGL         NG  
Sbjct: 574 HEKMSKSKGNVINPDDIVEQYGADTLRLYEMFMGPLEASKPWSEDGL---------NGAY 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R  ++I+ + D M        E +       ++ ++++ E+      + A++Q++ 
Sbjct: 625 KFINRIWNLIIDEDDNMRDRITTINEGELDF--AYNQTVKKVTEDFTKMHFNTAISQMMV 682

Query: 420 LVSEV 424
            V++ 
Sbjct: 683 FVNDC 687


>gi|118576253|ref|YP_875996.1| valyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194774|gb|ABK77692.1| valyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 773

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 30/194 (15%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLL 280
           Q I   W+D+  + L  + Y     G   KF    +PA L    KDI+R    Y    +L
Sbjct: 454 QRIFDTWMDSSVSPLFISKY-----GKDDKFFESTYPAGLRPQAKDIVRTWLYY---TML 505

Query: 281 SANLPLPKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +    K+ +S  +I+      +G+K+SK  GN IDP+ +++ +G DA R +   E++ 
Sbjct: 506 RCDQLTGKRPWSEAWIMGYGLDERGQKMSKRAGNSIDPLPLVKRIGADAFRLWSAGEVSH 565

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDESILSV 393
           G D          R N D+       +S+  +VS  L  +      P A  E D  ILS 
Sbjct: 566 GHD---------FRCNEDMMVSTKKFLSKLWNVSRFLSGFSSADAEPSA--EPDRWILSE 614

Query: 394 CSRVLQEIRENMQN 407
             +++ + +E  + 
Sbjct: 615 LDKLVSKCQEGYEK 628


>gi|91790434|ref|YP_551386.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123355109|sp|Q122Q4|SYL_POLSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91699659|gb|ABE46488.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 886

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 10/184 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y  + + YP+ + H+GH     I D+L R+ R+ G +VL   G D  G     A
Sbjct: 34  KPRGKYYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMKGYNVLMPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG
Sbjct: 94  AMKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSRE--VATCDPSYYKWNQWLFLKMLEKG 151

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y ++LL
Sbjct: 152 IAYRKTQVVNWDPVDQTVLANEQVI---DGKGWRTGAT-VEKREIPGYYLKITDYAEELL 207

Query: 178 SYYE 181
            + +
Sbjct: 208 GHVQ 211


>gi|225453207|ref|XP_002275733.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 475

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 11/106 (10%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSH 293
            +T G+ D       KF+P  +   G DIL F    W A ++   +     V     + H
Sbjct: 38  FSTLGWPDVSTQDFKKFYPTTVLETGHDILFF----WVARMVMMGIEFTGAVPFSYVYLH 93

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           G I   +G K+SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 94  GLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 138


>gi|325000617|ref|ZP_08121729.1| valyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 878

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 21/265 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+ D  PD     ++P  + V G DIL F  +    F   A   
Sbjct: 452 VLDTWFSSGLWPFSTLGWPDETPD--LEHYYPNSVLVTGYDILFFWVVRMMMFGTYAMGE 509

Query: 286 LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P + V+ HG I  + G+K+SKS GNVIDP++++E+ G DALR+ + R    G D     
Sbjct: 510 TPFRDVYLHGLIRDEHGKKMSKSKGNVIDPLDLMEDYGADALRFTIARGSNPGTDMSLSP 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEI 401
           + +    N      + N+   ++S   K  D  +P P     T++D  IL   + V  + 
Sbjct: 570 EWVAASRN--FTTKLWNITRFALS---KGADPHLPLPAEADRTDADRWILGRLAEVRGQT 624

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLA 459
            E +      +A   +          +D    W  EL KT  D  +T       +   L 
Sbjct: 625 DELLDGYQFAKATEGLYHFA------WDELADWYVELCKTQLDDPATAPGTRALLGHVLD 678

Query: 460 ILLQAFVPKLANKIFDILFVADENR 484
            LL+   P +A  + + L+ A   R
Sbjct: 679 ALLRMLHP-IAPFVTEALWTALTGR 702


>gi|320539653|ref|ZP_08039317.1| leucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030265|gb|EFW12280.1| leucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 860

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNHTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCQPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGGCWRCD-TKVERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|307266467|ref|ZP_07548002.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918508|gb|EFN48747.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 932

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSSHAAVLQ--THPDLK----WPAELYLEGSDQHRGWFQSSLLTSVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 583 PY-RNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  A 62
           A
Sbjct: 105 A 105


>gi|254452559|ref|ZP_05065996.1| valyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198266965|gb|EDY91235.1| valyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 1018

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 40/292 (13%)

Query: 210 SRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           S ++F   +++P   DP  ++  W  +    + T G+ ++    K K++P    + G+DI
Sbjct: 565 SIRSFAGPMQLPMFRDPD-VLDTWFSSGLWPIGTLGWPEDTPELK-KYFPTSDLITGQDI 622

Query: 268 LRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321
           L F    W A ++   L +  +V     + HG +   KG+K+SKS GNVIDP+++I+E G
Sbjct: 623 LFF----WVARMMMMQLAVVGEVPFNTIYLHGLVRDAKGKKMSKSTGNVIDPLDIIDEYG 678

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTP 380
            DALR+      + G        G  K   + +A G  N  ++  +     + +G   T 
Sbjct: 679 ADALRFTNAAMASLG--------GALKLDTSRIA-GYRNFGTKLWNACRFAEMNGAFSTD 729

Query: 381 GAFTES-------------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
              T               ++ I+   S+VL E+ + + N   + A   +   V     D
Sbjct: 730 AVHTGGVKDLYANHTSLSVNKWIIGETSKVLAEVDDALSNYRFNDAADALYKFVWGKVCD 789

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP  L  T+ ++A     V   V+ Q  ILL   +P +  +++ ++
Sbjct: 790 WYVELSKPLLLDGTDAEKAE-CQQVMNWVLTQSLILLHPIMPFITEELWGLM 840



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   + D+L R+HR+ G D L+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHAFNNTLQDILVRWHRMRGFDTLWQPGTD-----------HAGIATQMVVERQ 96


>gi|170016938|ref|YP_001727857.1| leucyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688957|sp|B1MY11|SYL_LEUCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169803795|gb|ACA82413.1| leucyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 803

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+++RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYAVDMFPYPSGQGLHVGHPEGYTATDIMSRFKRAKGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  QN  +FR+    L +SYD    I TT+  ++   + +++K+ +KG  
Sbjct: 89  AMKTGHNPADFTSQNIDHFREQIKSLGLSYDWNREINTTDPSYYKWTQWIFEKLYEKGLA 148

Query: 120 YK 121
           Y+
Sbjct: 149 YE 150



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 32/191 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 513 DPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGAN 572

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +++ E G D LR +      L +     ++G         RV   
Sbjct: 573 HEKMSKSKGNVVNPDDIVREYGADTLRVYEMFMGPLTQSKPWSEEGITGSRRWLDRVWRL 632

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L +  G L     ++   D D                  +  + ++++ ++++N   + A
Sbjct: 633 LIDDEGQLRDHVTTVNPGDLD-----------------KIYHQTVKKVTDDLENMRFNTA 675

Query: 414 LAQVISLVSEV 424
           ++Q++  V++ 
Sbjct: 676 ISQMMVFVNDA 686


>gi|329113498|ref|ZP_08242279.1| Valyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697323|gb|EGE48983.1| Valyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 920

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           ++  W  +     +T G+ D      A+++P D+ V G DI+     +W A ++      
Sbjct: 491 VLDTWFSSALWPFSTLGWPDKTP-ELARYYPTDVLVTGFDII----FFWVARMMMMGQHF 545

Query: 283 --NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  + +F HG +  + G+K+SKS GN IDP+E+I++ G DA+R+ +      G+D
Sbjct: 546 MHDVPF-RNIFIHGLVRDEHGQKMSKSKGNGIDPLELIDQYGADAMRFTICALTGIGRD 603



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA  M + D L R+ R+ G D L+  GTD           +AG+ T++ V++ 
Sbjct: 73  HMGHALTMTLQDTLIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVERT 117


>gi|288957547|ref|YP_003447888.1| isoleucyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288909855|dbj|BAI71344.1| isoleucyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 943

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  FH+    +       P    V +HGF+L  +G K+SKSLGNV+ 
Sbjct: 571 WPADLYLEGSDQHRGWFHSSLLESCGTRGRAPY-NAVLTHGFVLDEQGRKMSKSLGNVVA 629

Query: 313 PIEVIEEVGVDALRYFLV-----REIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           P EV ++ G D LR +++      ++  GK+    +  L +R+   L   +G L 
Sbjct: 630 PQEVCDQYGADILRLWIINSDYSEDLRIGKEIIKTQADLYRRLRNTLRYLLGALA 684



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 29/57 (50%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R+K  +     Y N   HIGHA   I+ DV+ RF ++ G D  +  G D HG  I
Sbjct: 47  KGRKKFVLHDGPPYANGNIHIGHAVNKILKDVIVRFRQMQGFDADYVPGWDCHGLPI 103


>gi|78189645|ref|YP_379983.1| leucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729832|sp|Q3APY5|SYL_CHLCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78171844|gb|ABB28940.1| leucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 805

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    H+GH      +D++AR+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGSGLHVGHLEGYTASDIIARYKRSSGYNVLHPMGWDAFGLPAEQFA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   ++  + N +NF+     +  SYD    I TT+  +    + ++ ++ D+G  Y
Sbjct: 90  IKTGTHPRITTEANVKNFKGTLQAMGFSYDWEREINTTDSGYFKWTQWIFLQLYDRGLAY 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
                  W         N++   K ADG  Y     P+ QW+       +++AY ++LL+
Sbjct: 150 MSEVDVNWCEELKTVLANEEVDEKLADG--YTVVRRPLRQWV------LKITAYAERLLA 201

Query: 179 YYES--HPEFILPIER 192
             E    PE +  ++R
Sbjct: 202 DLEELDWPENVKQMQR 217



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 41/239 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           DG+  ++W   DL++ G +    H +Y   W   L     +S   P  +K+F+ G IL +
Sbjct: 514 DGNNERYWMNVDLYIGGAEHAVLHLLYSRFWHKVLYDLGVVSTKEPF-QKLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V++  G DA+R +         + F       K  N +   GI
Sbjct: 573 DNEKMSKSRGNVIPADHVLQRYGADAVRLY---------EMFLGPLEQVKPWNTNGIEGI 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + +    +  ++      P      DE +L    + ++++ ++  +   + A+A+++
Sbjct: 624 SRFLGKVWRFVYPEHSEAATQPSNEPLPDE-LLRRMHKTIKKVGDDTSSLKFNTAIAEMM 682

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V+            EL KT  +          E I  L  LL  + P +  ++++ L
Sbjct: 683 VFVN------------ELTKTGCNNR--------EAIETLLKLLAPYAPHMTEELWEAL 721


>gi|33862987|ref|NP_894547.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|48428527|sp|Q7TV01|SYL_PROMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634904|emb|CAE20890.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 878

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++ Y  +   YP+ + H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 46  QKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAI 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              V    + DQN    R   D L +S  D+ R     H D  R  W +      ++   
Sbjct: 106 ARNVDPGDWTDQNIAQMRAQLDRLGLSI-DWDRQQATCHQDYYR--WTQW-----LFLEL 157

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL 176
           ++G  + + EA  N D V K        DG+  + +    V+  + + +F R++ Y D L
Sbjct: 158 FAGGLAYQKEATVNWDPVDKTVLANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADAL 217

Query: 177 L 177
           +
Sbjct: 218 I 218


>gi|300309930|ref|YP_003774022.1| leucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072715|gb|ADJ62114.1| leucyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 882

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 16/188 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 36  RDKKKFYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV     T   +D      + M   +D S +  +      ++   + ++ K+ +KG
Sbjct: 96  AMANGVPPAQWTYSNIDYMKSQMQSMGLAIDWSRE--MTACRPEYYKWNQWMFLKMLEKG 153

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            IYK   +  +   D+    +++V  G     G     +  P+       Y+ +++ Y D
Sbjct: 154 IIYKKTGTVNWDPIDQTVLANEQVIDGRGWRSGAVIEKREIPM-------YYAKITDYAD 206

Query: 175 KLLSYYES 182
           +LL + E+
Sbjct: 207 ELLEHVET 214


>gi|256751721|ref|ZP_05492595.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749390|gb|EEU62420.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 932

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSSHAAVLQ--THPDLK----WPAELYLEGSDQHRGWFQSSLLTSVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 583 PY-RNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  A 62
           A
Sbjct: 105 A 105


>gi|162447112|ref|YP_001620244.1| leucyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189082977|sp|A9NET8|SYL_ACHLI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161985219|gb|ABX80868.1| leucyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 803

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+A   H+GH       D+++RF R+ G +VL   G D +G    + A 
Sbjct: 32  QKYYVLDMFPYPSASGLHVGHIEGYTATDIVSRFKRMQGYNVLHPMGWDAYGLPSEQYAL 91

Query: 64  NAGVTTKVFVDQNSRNFR----DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG-D 118
             G   K F  QN  NF+    +M   +D  +D  + TT+  +    + ++K++ +KG  
Sbjct: 92  ATGKDPKSFTYQNISNFKRQIIEMGKGVD--WDKELATTDPEYFKWTQWIFKRLYEKGLA 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLL 177
           + K     W         ND+   +  +GQ  + + H PV       +  R++ Y D+LL
Sbjct: 150 VLKDVEVNWCEGLGTVLANDE--IEIINGQMVSERGHYPVIKKPMRQWVLRITEYADRLL 207



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 28/180 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHKGE-KIS 304
           +F P DL+V G +    H +Y   W  F      +S+  P  K V + G IL     K+S
Sbjct: 525 QFLPVDLYVGGTEHAVGHLLYARFWHKFFYDLGFVSSKEPFMKLV-NQGMILGADHSKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN + P + I+  G DALR F +       +  +  +GL+                R
Sbjct: 584 KSKGNSVSPDDFIQSHGADALRLFEMFMGPLEAEKPWSNEGLEG-------------AKR 630

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +  + + +D  I       +  +++ +V  + ++++ E+ +    + A++Q++  V+EV
Sbjct: 631 FLDRVWRMFDFEIT-----QQPVDALQTVYHQTVKKVTEDYEKLAFNTAISQMMIFVNEV 685


>gi|302871944|ref|YP_003840580.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574803|gb|ADL42594.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 817

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y 
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLIELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  Y  W    +    N+  V    +G+    + + V   + E +FFR++ Y ++LL
Sbjct: 150 KRSYVNWCPSCETVLANEQVV----NGRCERCK-SLVGKKDLEQWFFRITNYAERLL 201



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 94/202 (46%), Gaps = 44/202 (21%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   G++
Sbjct: 564 KNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQGVE 623

Query: 348 K---------RVNADLANGIG--NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                     R+  +L N +   NLV  S                   E D+ +    + 
Sbjct: 624 GCFRFLNRLWRLYIELKNKLADDNLVGES-------------------ELDDELRYRLNY 664

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ E++  +   + A++ ++ L++ +  Y +++      K N D       + ++ +
Sbjct: 665 TIKKVTEDIGERFNFNTAISTIMELLNFLYEYKESE------KLNKD-------LIIDTL 711

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           R L IL+  F P +A ++++I+
Sbjct: 712 RNLLILIYPFTPHIACELWEIM 733


>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 933

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++          +  K   WPAD+++ G D  R  FH+    +       
Sbjct: 539 ILDVWFDSGVSHAAVC------EVRKELGWPADMYLEGSDQHRGWFHSSLLESVGTRGRA 592

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K+V +HGF++  KG K+SKSLGNVI P E+I++ G + LR ++  E
Sbjct: 593 PY-KEVLTHGFVVDGKGLKMSKSLGNVITPDEIIDKYGAEILRLWVAAE 640


>gi|296085363|emb|CBI29095.3| unnamed protein product [Vitis vinifera]
          Length = 963

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 53/220 (24%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   E     I+P ER  ++ +   S +KD  +SR+ + WG +IP   
Sbjct: 414 WFVTMEPLAEKALQAVERGELTIMP-ERFEKIYNHWLSNIKDWCISRQLW-WGHRIPVWY 471

Query: 222 -----DDPQYIMY----------------------------VWIDALTNYLTTTGYLDNP 248
                 + +YI+                              W  +     +T G+ D  
Sbjct: 472 IVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVS 531

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHKG--- 300
                KF+P  +   G DIL F    W A ++   +     V     + HG I       
Sbjct: 532 TQDFKKFYPTTVLETGHDILFF----WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQAST 587

Query: 301 --EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             EK+SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 588 MQEKMSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 626



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA  + + D++ R+HR+ G   L+  GTD           +AG+ T++ V++
Sbjct: 103 HMGHAMFVTLEDIMVRYHRMKGRPTLWIPGTD-----------HAGIATQLVVER 146


>gi|269302974|gb|ACZ33074.1| valyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 940

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 103/277 (37%), Gaps = 72/277 (25%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +L ++  +   E YK   G  Y +      ++ ++ +F  +S ++  L  + ES    I 
Sbjct: 328 ALEEQGLFVRKEPYKLRVGVSYRSGAVIEPYLSKQ-WFVSVSEFRGALREFVESQDIKIF 386

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQYIMY------------- 229
           P +     +S+V   L+D  +SR+ + WG +IP      DD + + Y             
Sbjct: 387 PKDFVKNYLSWVNH-LRDWCISRQLW-WGHRIPVWYHKNDDERVLCYDGEGIPEEVAQDP 444

Query: 230 -----------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                       W  +    LT  G+ D       KF+P  L V G DIL F        
Sbjct: 445 DSWYQDPDVLDTWFSSGLWPLTCLGWPDENSPDLKKFYPTALLVTGHDILFFWVTRMVLL 504

Query: 279 LLSANLPLP-KKVFSHGFILHKG-----------------------------------EK 302
             S +   P  +VF HG I  K                                    EK
Sbjct: 505 CSSMSGEKPFSEVFLHGLIFGKSYKRYNDFGEWSYISGKEKLAYDMGEALPDGVVAKWEK 564

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +SKS GNVIDP+E+I   G DA+R  L    +C   G
Sbjct: 565 LSKSKGNVIDPLEMIATYGTDAVRLTLC---SCANRG 598



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 50/172 (29%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD---QNS 77
           H+GHA    + DVL R+ R+ G +V +  GTD           +AG+ T+  V+   Q S
Sbjct: 54  HMGHALVNTLQDVLVRYKRMSGFEVCWIPGTD-----------HAGIATQTVVERHLQAS 102

Query: 78  RNFRDMADVLDISYDDFIR-------------------------------TTEKRHHDTC 106
              R      D S +DF++                               T E   +   
Sbjct: 103 EGKRRT----DYSREDFLKHIWAWKEKSEKVILSQLRQLGCSCDWDRKRFTMEPLANRAV 158

Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  +K + + G IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V
Sbjct: 159 KKAFKTLFENGYIYRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRMV 210


>gi|269215644|ref|ZP_06159498.1| valine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131131|gb|EEZ62206.1| valine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 901

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ D+P   +    P  + V  +DI+      W A ++ ++L  
Sbjct: 462 VLDTWFSSQLWTFATQGWPDDPSLMQGHH-PTKVLVTARDIIAL----WVARMIMSSLYF 516

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + VF +  IL K G ++SKS GN +DP+++IE  G DA+R+ L+  +   +D  
Sbjct: 517 TDEIPFEDVFIYATILAKDGSRMSKSKGNGVDPMQLIETYGADAMRFNLLTLVTGTQDVR 576

Query: 341 YD----KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCS 395
           +D    +DG  +    + A G    +  +   +  + +G  P  P   T +D  + S  +
Sbjct: 577 FDAEKLEDGTFESPRTEAARGFVTKIWNASRFVQMNLEGFTPGAPEIRTSADAWMFSRLA 636

Query: 396 RVLQEIRENMQN 407
           ++++ +   ++ 
Sbjct: 637 KLVRSVTSGIEE 648


>gi|118110948|ref|XP_001236925.1| PREDICTED: similar to Methionine-tRNA synthetase, partial [Gallus
           gallus]
          Length = 131

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+    ++ AD  AR+ RL   + L+  GTDE+G      A   G+
Sbjct: 35  ITSALPYVNNVPHLGNIIGCVLSADAFARYCRLRNWNTLYVCGTDEYGTATETKAVEEGL 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
           T +   D+      D+    DIS+D F RTT
Sbjct: 95  TPREICDKYHAVHADIYRWFDISFDYFGRTT 125


>gi|70732744|ref|YP_262507.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123761979|sp|Q4K5H6|SYL_PSEF5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68347043|gb|AAY94649.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 868

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 16/188 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N        R +   +D S +  + T +  ++   + L+ ++ +KG I
Sbjct: 92  KNNVAPAKWTYENIAYMKTQLRSLGLAVDWSRE--VTTCKPDYYRWEQWLFTRLFEKGVI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+L
Sbjct: 150 YRKNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADEL 202

Query: 177 LSYYESHP 184
           L   +  P
Sbjct: 203 LESLDELP 210


>gi|326389978|ref|ZP_08211541.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994038|gb|EGD52467.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 932

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSSHAAVLQ--THPDLK----WPAELYLEGSDQHRGWFQSSLLTSVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 583 PY-RNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  A 62
           A
Sbjct: 105 A 105


>gi|90961419|ref|YP_535335.1| leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993086|sp|Q1WUT3|SYL_LACS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90820613|gb|ABD99252.1| Leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 805

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 30/158 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K W P +L+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 514 DYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSN 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFY------------ 341
            EK+SKS GNV++P +++E+ G D LR +      L   I   ++G              
Sbjct: 574 HEKMSKSKGNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGLGGAHKFINRVWNL 633

Query: 342 ---DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              + D L+ RV     + +  + + +V  + +DY+ M
Sbjct: 634 LIDENDNLRDRVTTINNHDLDKIYNETVKKVTEDYEAM 671


>gi|167037288|ref|YP_001664866.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040517|ref|YP_001663502.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914564|ref|ZP_07131880.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724200|ref|YP_003903951.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115704|ref|YP_004185863.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|254782449|sp|B0K8R7|SYI_THEP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782450|sp|B0K2W1|SYI_THEPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166854757|gb|ABY93166.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856122|gb|ABY94530.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889499|gb|EFK84645.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581261|gb|ADN54660.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928795|gb|ADV79480.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 932

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        +PD      WPA+L++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSSHAAVLQ--THPDLK----WPAELYLEGSDQHRGWFQSSLLTSVATRGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 583 PY-RNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  A 62
           A
Sbjct: 105 A 105


>gi|330444687|ref|YP_004377673.1| valyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807797|gb|AEB41970.1| valyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 940

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 92/242 (38%), Gaps = 73/242 (30%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++ ++  +  S    I P E +   +++  + L+D  +SR+ + WG +IP   
Sbjct: 363 WFISVDSFRKEVCDFVHSESIRIFPKEFKRNYLAWA-NNLRDWCISRQLW-WGHRIPVWY 420

Query: 222 --DDPQYIMY-------------------------VWIDALTNYLTTTGYLDNPDGSKAK 254
             +DP+ I+                           W  +    LT  G+ D       K
Sbjct: 421 HKEDPERIICYDGEGVPEEVARDPESWEQDPDVLDTWFSSGLWPLTCLGWPDENAEDLKK 480

Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHKG------------ 300
           F+P  + V G DIL F    +    F +    P   +VF HG I  K             
Sbjct: 481 FYPTSVLVTGHDILFFWVTRMVLLCFAMYGEKPF-SEVFLHGLIFGKSYKRYNELGEWSY 539

Query: 301 -----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                                  EK+SKS GNVIDPIE+IE  G DA+R  L    +C  
Sbjct: 540 ISGAEKREYDLGKELPKDVIAKWEKLSKSKGNVIDPIEMIEMYGADAVRMTLC---SCAN 596

Query: 338 DG 339
            G
Sbjct: 597 RG 598



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 30/162 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR-- 78
           H+GHA    + DVL R+ R+ G +  +  GTD  G      A  A V  ++F     R  
Sbjct: 54  HMGHALVNTLQDVLIRYKRMQGFETCWIPGTDHAG-----IATQAVVERRLFETLGKRRS 108

Query: 79  ------------NFRDMADVLDISY-------DDFIRTTEKRHHDTCRIL---WKKISDK 116
                        +++ ++ + +S         D+ R         CR +   +KK+ D+
Sbjct: 109 QFSREEFLEHVWEWKEKSEEVILSQLKQLGCSCDWTRKRFTLETSACRAVKRAFKKLFDQ 168

Query: 117 GDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           G+IY+G Y   W  +   A  +D+  Y+  +G  Y  ++  V
Sbjct: 169 GNIYRGYYLVNWDPVLQTALSDDEVEYEEKEGWLYYIRYRVV 210


>gi|229163736|ref|ZP_04291681.1| Leucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619703|gb|EEK76584.1| Leucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 802

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F + N   FR+    L  SY  D  + TT   ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTNPNYYKWTQWIFLQLFEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+      +  +++AY D+LL
Sbjct: 149 YVDEVPVNWCPALGTVLANEEII----DGKSERGGH-PVERRPMRQWMLKITAYGDRLL 202



 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 20/116 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK 348
             EK+SKS GNV++P +++   G D LR +      L   IA  ++G    DG ++
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---DGARR 625


>gi|225851466|ref|YP_002731700.1| valyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646482|gb|ACO04668.1| valyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 1098

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ ++    K+ F+P  L + G DI+ F    W A ++   +  
Sbjct: 657 VLDTWFSSALWPFGTLGWPEDLKDLKS-FYPTSLLITGFDIIFF----WVARMIMMGMHF 711

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K+     V+ H  +   KGEK+SK+ GNVIDP+++IE+ G D+LR+ L    A G+D
Sbjct: 712 MKEKPFSDVYIHALVRDEKGEKMSKTKGNVIDPLDMIEKYGADSLRFTLAALAAQGRD 769



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 5  EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +K Y S  +  PN     HIGHA  M + D+  R+ R+ G + L+  G D  G
Sbjct: 32 DKPYFSVVMPPPNVTGSLHIGHALNMTLQDITVRYKRMKGFNTLWLPGFDHAG 84


>gi|116747642|ref|YP_844329.1| valyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696706|gb|ABK15894.1| valyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 892

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 156/373 (41%), Gaps = 45/373 (12%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E Y    G  Y  + + V+ M+   +F       D+ +         I+P +   +   +
Sbjct: 338 ENYHHRVGHCYRCK-SVVEPMQSLQWFVSTRPLADRAMKAVRDGSTAIVPAKWEKDYFIW 396

Query: 200 VKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVW 231
           +++ L+D  +SR+ + WG +IP              ++P+               ++  W
Sbjct: 397 LEN-LEDWCVSRQIW-WGHRIPAWYCRDCGELIVAREEPRECSMCKGTRLEQDSDVLDTW 454

Query: 232 IDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-K 288
             +     +T G+   PD +    KF+P  + V   DIL F         + A   +P +
Sbjct: 455 FSSGLWPFSTLGW---PDRTPELDKFYPTSVLVTAFDILFFWVARMMMMGIHAMHEVPFR 511

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           +V+ H  +   +G+K+SKS GNVIDP+ ++E  G DA R+ L      G+D    ++ ++
Sbjct: 512 EVYIHALVRDAQGQKMSKSKGNVIDPLVMMERYGTDAFRFTLAAFAVQGRDVKLSEERIE 571

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQ 406
              +    N I N  +R + M L+    +   P    +     ILS   RV+ E+   ++
Sbjct: 572 GYKH--FVNKIWN-AARLLLMNLQGEASLEEIPSKPVQLMHRWILSRLQRVVGEVDSALE 628

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           N   ++    +   +     D Y +  KP +L   +         ++V V+ Q+ +LL  
Sbjct: 629 NYHFNQYANVLYQFLWREYCDWYLEMIKP-DLYGEDEAAGRLAKSISVRVLEQILVLLHP 687

Query: 465 FVPKLANKIFDIL 477
            +P +  +I+  L
Sbjct: 688 VMPFVTEEIYQKL 700



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 13 IAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          I  PN   Q H+GHA    + D+L+R+ RL G +VL+  GTD  G
Sbjct: 44 IPPPNVTGQLHMGHALNNTLQDILSRYKRLKGFEVLWLPGTDHAG 88


>gi|306841586|ref|ZP_07474283.1| leucyl-tRNA synthetase [Brucella sp. BO2]
 gi|306288332|gb|EFM59695.1| leucyl-tRNA synthetase [Brucella sp. BO2]
          Length = 877

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   +IL+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQILFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|300214279|gb|ADJ78695.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 805

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 30/158 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K W P +L+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 514 DYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSN 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFY------------ 341
            EK+SKS GNV++P +++E+ G D LR +      L   I   ++G              
Sbjct: 574 HEKMSKSKGNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGLGGAHKFINRVWNL 633

Query: 342 ---DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              + D L+ RV     + +  + + +V  + +DY+ M
Sbjct: 634 LIDENDNLRDRVTTINNHDLDKIYNETVKKVTEDYEAM 671


>gi|227820993|ref|YP_002824963.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227339992|gb|ACP24210.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 973

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 576 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCATRGRA 629

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  KGEK+SKS GN + P EV+++ G D LR +++
Sbjct: 630 PY-DAVVTHGFTMDEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVM 675



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 58  REKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKIE 117

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRT----------TEKRHHDTCR 107
            K  +       V V++  +  RD A   +++  ++F R           T    H   R
Sbjct: 118 EKYREKGRNKDDVPVNEFRQECRDFASGWIEVQTEEFKRLGIEGDFDKPYTTMNFHAEAR 177

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + E+
Sbjct: 178 IAGELMKIAKAGQLYRGSKPVMWSVVERTALAEAEI 213


>gi|254469825|ref|ZP_05083230.1| valyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961660|gb|EEA96855.1| valyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 945

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA-FLLSANLP 285
           ++  W  +     +T G+ D      A+++P  + V G DI+ F    W A  ++  N  
Sbjct: 512 VLDTWFSSALWPFSTMGWPDKT-AELARYYPTSVLVTGFDIIFF----WVARMMMMGNHY 566

Query: 286 LPKK----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +  +    V+ H  +   KG K+SKS GNVIDP+ +IEE G DALR+ L    A G+D
Sbjct: 567 MKTEPFDTVYIHALVRDEKGAKMSKSKGNVIDPLALIEEYGADALRFTLSAMAAQGRD 624


>gi|39997143|ref|NP_953094.1| valyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81702023|sp|Q74BJ6|SYV_GEOSL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39984033|gb|AAR35421.1| valyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506156|gb|ADI84879.1| valyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 887

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 41/208 (19%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222
           ++ ++    ++ L+  +     I+P +  N    ++++ +KD  +SR+ + WG +IP   
Sbjct: 363 WYVKVGPLAERALAAVKDGRTRIVPQQWENTYYDWMEN-IKDWCISRQIW-WGHRIPAWY 420

Query: 223 ------------DPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                       DP                ++  W  +     +T G+ D      A F+
Sbjct: 421 CDHCGETTVAKIDPTVCAACGSDEIRQETDVLDTWFSSALWPFSTMGWPDRTP-ELAAFY 479

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNV 310
           P    V G DIL F    W A ++   L    +V      +H      +G+K+SKS GNV
Sbjct: 480 PTSCLVTGFDILFF----WVARMMMMGLHFMNEVPFSDVYIHALVRDAQGQKMSKSKGNV 535

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD 338
           IDP+ VI++ G DA R+ L    A G+D
Sbjct: 536 IDPLVVIDQYGTDAFRFTLAAFAAQGRD 563



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + D+L R+ R++G +VL+  GTD  G
Sbjct: 41 SIVIPPPNVTGALHMGHALNNTLQDILCRWKRMNGYEVLWMPGTDHAG 88


>gi|325989664|ref|YP_004249363.1| leucyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574749|emb|CBZ40405.1| Leucyl-tRNA synthetase [Mycoplasma suis]
          Length = 743

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  HIGH    + +D++AR+ ++ G  VL   G D  G    + A
Sbjct: 40  KPKFYVLDMFPYPSGAGLHIGHVKGYLASDIVARYKKMKGFSVLHPMGWDSFGLPAEQYA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKG-D 118
                    F ++N   FR+    L  SYD     I +++  ++   + L+ ++  +G  
Sbjct: 100 IQNKADPSTFTEKNISRFREELKSLFFSYDFQNKEINSSDSSYYAITQWLFLQLYRRGLA 159

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176
             +     W         N +E+Y+G DG++Y+ + N PV   + + +  +++ Y   L
Sbjct: 160 TLENKQVNWVEELHTVLAN-EEIYEGEDGKFYSERGNFPVTTRKLKQWVLKITKYAQAL 217


>gi|288801202|ref|ZP_06406657.1| valine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331813|gb|EFC70296.1| valine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 879

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 29/252 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           +++PD ++ K++ P  + V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 475 INDPDNAELKYYYPTSVLVTGPDIIFF----WVARMIMAGYEYKHEMPF-KSVYFTGIVR 529

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D+   ++  N     
Sbjct: 530 DKLGRKMSKSLGNSPDPLDLIEQYGADGVRMGMMLSAPAGNDILFDETLCEQGRN----- 584

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              N +  +  +I          P     + +   +   +  QE+ +      I  AL  
Sbjct: 585 -FNNKIWNAFRLIKGWSTSEEEQPATNAIAVKWFEAKLRQANQELNDLFSKYRISEALMV 643

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P   S +       T++    L  +L  F+P +  +
Sbjct: 644 VYKL------FWDEFSSWYLEMIKPSYGSPIDKKTFEATLQFFETLLKMLHPFMPFITEE 697

Query: 473 IFDILFVADENR 484
           ++  ++  +E +
Sbjct: 698 LWQHIYTREEGQ 709


>gi|254418324|ref|ZP_05032048.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184501|gb|EDX79477.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 849

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GHA   ++ DV+AR  R  G DVL   G D  G     AA 
Sbjct: 30  RPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARSKRAQGYDVLHPMGWDAFGMPAENAAM 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+  K +   N    RD   +L +S D
Sbjct: 90  ERGIHPKGWTYDNIAQMRDQLKLLGLSLD 118



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 31/191 (16%)

Query: 289 KVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +  S G  L  G  EK+SKS  NV+ P E++E  GVDA R F++ +    +D  +   G+
Sbjct: 604 RQLSTGETLMIGDIEKMSKSKKNVVAPQEILESHGVDAGRLFVLSDSPPERDVQWTPGGV 663

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +         G    V R+ ++    YD          +++  +L    + ++ + E ++
Sbjct: 664 E---------GASRFVQRTWTL-FDAYDAGF---AGEDKANAELLRETHKAIKAVSEGVE 710

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A+A++ + V+ V                 D A        + +  LA L+  F 
Sbjct: 711 GFRFNSAIAKLYAFVATVR----------------DSAQAGGDAKRQALSALARLIAPFT 754

Query: 467 PKLANKIFDIL 477
           P LA + +  L
Sbjct: 755 PHLAEECWTRL 765


>gi|111115076|ref|YP_709694.1| leucyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123341386|sp|Q0SNR0|SYL_BORAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110890350|gb|ABH01518.1| leucyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 840

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+ AR+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFARYKILNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPKKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|262274725|ref|ZP_06052536.1| leucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221288|gb|EEY72602.1| leucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 857

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 25/257 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWDREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVIS--FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           +     PE +  ++R    R+E +   F   G  DL +           PD    + YV 
Sbjct: 207 DKLDGWPEQVKTMQRNWIGRSEGVELKFQVPGENDLEVYTTR-------PDTLMGVTYVG 259

Query: 232 IDALTNYLTTTGYLDNP 248
           I A  + L T    +NP
Sbjct: 260 I-AAGHPLATKAAQNNP 275


>gi|219871152|ref|YP_002475527.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691356|gb|ACL32579.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 862

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 31  ESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++    L   +  D  + T    ++   +  + ++  KG +
Sbjct: 91  AVKNKTAPAKWTYENIEYMKNQLKALGFGFDWDREVTTCRPEYYKWEQWFFTELYKKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+
Sbjct: 151 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLN 205


>gi|167855810|ref|ZP_02478563.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853089|gb|EDS24350.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 861

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  ESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++    L   +  D  + T    ++   +  + ++  KG +
Sbjct: 90  AVKNKTAPAKWTYENIEYMKNQLKALGFGFDWDREVTTCRPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL+
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLN 204


>gi|257428538|ref|ZP_05604936.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275379|gb|EEV06866.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 805

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  + K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPERLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|242310533|ref|ZP_04809688.1| valyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522931|gb|EEQ62797.1| valyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 887

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 21/134 (15%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRFH 271
           I  DP  ++  W  +     +T GY +   G            F+P  L + G DIL F 
Sbjct: 452 IHQDPD-VLDTWFSSALWAFSTLGYGNGKWGEGTLWQKDDLQNFYPNSLLITGFDILFF- 509

Query: 272 AIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
              W A +L         LP P  ++ H  +    G+K+SKS GNV+DP+E+IE+   D 
Sbjct: 510 ---WVARMLMMGEHFLLELPFPN-IYLHALVRDENGQKMSKSKGNVVDPLELIEKYSADV 565

Query: 325 LRYFLVREIACGKD 338
           LR+ L    A G+D
Sbjct: 566 LRFTLATLCAQGRD 579


>gi|92117373|ref|YP_577102.1| valyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800267|gb|ABE62642.1| valyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 954

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 35/265 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     K +++P +  V G DI+     +W A ++   +  
Sbjct: 495 VLDTWFSSGLWPFSTLGWPDETPELK-RYYPTNALVTGFDII----FFWVARMMMMGIYF 549

Query: 287 PKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++V     + H  +    G K+SKS GNVIDP+ ++++ G DALR+ L    A G+D  
Sbjct: 550 MREVPFSTVYIHALVRDENGAKMSKSKGNVIDPLHLVDKYGADALRFTLAAMAAQGRD-- 607

Query: 341 YDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDES----ILSVC 394
                   +++     G  N  ++  +     +  D ++P     T + E+    I+   
Sbjct: 608 -------IKLSPQRVEGYRNFATKLWNACRFAEMNDCVVPAQFDPTVAKETLNRWIVHET 660

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLY 449
           +R   EI E ++    + A   +   V  V  D Y +  KP  + +  P ++ T   V +
Sbjct: 661 ARATCEITEAIEAYRFNDAAGAIYRFVWNVYCDWYLELAKPVMMGEDGPAKSETRAMVAW 720

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
              E+++    LL  F+P L  +++
Sbjct: 721 ARDEILK----LLHPFMPFLTEELW 741



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + DVL RF R+ G DVL+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHALNNTLQDVLCRFERMRGRDVLWQPGTD-----------HAGIATQMVVERQ 96


>gi|258593868|emb|CBE70209.1| isoleucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 941

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 21/179 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDW---GIKIP-- 221
           R  A+   ++++Y +H   IL   R  E V + ++    DL  +    D    G   P  
Sbjct: 471 RQRAWGVPIVAFYCAHCGHILADRRIAEHVATMIERTGADLWYTDTAADLLPPGTACPNC 530

Query: 222 -----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIY 274
                +  + I+ VW D+  ++        +      + WPAD+++ G D  R  FH+  
Sbjct: 531 KGTDFEKERDILDVWFDSGVSHAAVLEVRSD------QQWPADMYLEGSDQHRGWFHSSL 584

Query: 275 WPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             A       P  + V +HGF++  +G+K+SKSLGNV+ P EVI+  G + LR ++  E
Sbjct: 585 LTAVGTRGRAPY-RAVLTHGFVVDGEGKKMSKSLGNVVAPQEVIDRYGAEILRLWVAAE 642


>gi|257425871|ref|ZP_05602295.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257431172|ref|ZP_05607549.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433853|ref|ZP_05610211.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436770|ref|ZP_05612814.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282914552|ref|ZP_06322338.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282924898|ref|ZP_06332564.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|293503630|ref|ZP_06667477.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510646|ref|ZP_06669351.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537187|ref|ZP_06671867.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257271565|gb|EEV03711.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257278120|gb|EEV08768.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281946|gb|EEV12083.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284121|gb|EEV14244.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313264|gb|EFB43660.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282321733|gb|EFB52058.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|290920032|gb|EFD97100.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095296|gb|EFE25561.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466537|gb|EFF09058.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
          Length = 805

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  + K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 515 DPERLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 575 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 634

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ E+ +    + A
Sbjct: 635 MVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTEDFETLGFNTA 677

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 678 ISQLMVFINECYKVDEVYKPY 698



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150


>gi|216263987|ref|ZP_03435981.1| leucyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980031|gb|EEC20853.1| leucyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 840

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+ AR+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFARYKILNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPKKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|148284275|ref|YP_001248365.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|189030293|sp|A5CCT4|SYL_ORITB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146739714|emb|CAM79534.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 838

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 21/199 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI     YP+ + H+GH     I DV+ARF R  G +VL   G D  G     AA   
Sbjct: 30  KRYILPMFPYPSGKAHVGHVRNYTICDVIARFERSQGHNVLHAMGWDAFGLPAENAAMQN 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-KG 122
                 +V  N    R     + +SYD    I T   +++   +  + ++  KG +Y K 
Sbjct: 90  NTYPNSWVSSNVDVMRQQLKAIGLSYDWSREIITCSSQYYVHEQRFFLEMLKKGLVYQKE 149

Query: 123 CYSGW-----YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               W       L +E   N      GA  +Y N +    QW      F +++ Y D LL
Sbjct: 150 SLVNWDPIDQTVLANEQVINGKGWRSGAIIEYRNLK----QW------FIKITNYADALL 199

Query: 178 SYYES---HPEFILPIERR 193
              +S    PE +  ++++
Sbjct: 200 KGLDSLKGWPESVKTMQKK 218


>gi|300022772|ref|YP_003755383.1| valyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524593|gb|ADJ23062.1| valyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 939

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 27/261 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D       +++P  + V G DI+ F    W A ++   L  
Sbjct: 506 VLDTWFSSALWPFSTLGWPDETP-ELGRYYPTSVLVTGFDIIFF----WVARMMMMGLHF 560

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P K V+ H  +   +G+K+SKS GNV+DP+ +I+E G DALR+ L    A G+D  
Sbjct: 561 MDEVPFKDVYIHALVRDERGQKMSKSKGNVMDPLVLIDEFGADALRFTLAAMAAQGRDIK 620

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDYDGMIPTPGAFTES-DESILSVCS 395
             K  ++   N   A  + N  SR   M      +++D     P + T+  ++ I+    
Sbjct: 621 LAKSRVEGYRN--FATKLWN-ASRFAEMNECVRQRNFD-----PKSATQIFNKWIIGEAE 672

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              + + E ++    + A A +   V     D Y +  KP  L   + D  S    VT  
Sbjct: 673 LTAKAVTEALEGYKFNEAAAAIYEFVWGEFCDWYLELIKPL-LAGDDEDAKSETRAVTAW 731

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + Q+  +L  F+P +  +++
Sbjct: 732 TLDQILKMLHPFMPFITEELW 752



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 40 SIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGRDVLWQPGTD-----------HAGI 88

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 89 ATQMVVERQ 97


>gi|227890503|ref|ZP_04008308.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867441|gb|EEJ74862.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 805

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 30/158 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K W P +L+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 514 DYEKLKEWLPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSN 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFY------------ 341
            EK+SKS GNV++P +++E+ G D LR +      L   I   ++G              
Sbjct: 574 HEKMSKSKGNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGLGGAHKFINRVWNL 633

Query: 342 ---DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              + D L+ RV     + +  + + +V  + +DY+ M
Sbjct: 634 LIDENDNLRDRVTTINNHDLDKIYNETVKKVTEDYEAM 671


>gi|213410098|ref|XP_002175819.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003866|gb|EEB09526.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 873

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK+YI +   YP+   H+GH     IAD+LARF+R+ G +V+   G D  G     AA 
Sbjct: 56  KEKMYILSMFPYPSGSLHMGHVRVYTIADLLARFYRMKGYEVIHPIGWDAFGLPAENAAL 115

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  +V+   N    +     +++ +D
Sbjct: 116 ERQIKPEVWTSSNIVKMKQQLLAMNVQFD 144


>gi|300813634|ref|ZP_07093962.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300512270|gb|EFK39442.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 1033

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 22/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D     F PAD    G D  R  F+++   +  ++  
Sbjct: 514 VIDVWFDSGSMPFAQWHYPFENKDNFDELF-PADFICEGIDQTRGWFYSLLAISTYMTGK 572

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  +  IL K G+K+SKS GN + P E+ ++ G D +R++L+          +D
Sbjct: 573 SPY-KNVLVNDLILDKEGKKMSKSRGNTVAPFELFDKYGADVVRWYLLYVSPPWNPTKFD 631

Query: 343 KDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFT-------ESDESILSVC 394
           +DGL++ + +     + N+ +  S+     D D     P  F        E D+ +LS  
Sbjct: 632 EDGLRE-MESKFFRSLRNIYNFFSLYANTDDID-----PRTFQVKYEDRDEIDKWLLSKY 685

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTV- 452
           +R+++ +R++M    + + + ++   V  E+  ++  +      KT+ D +   +Y T  
Sbjct: 686 NRLVKVVRDDMDKFELTKVVREISDFVIEELSNWYIRRNRRRFWKTDKDDSKFAVYATTY 745

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
           EV+  ++ L+   VP ++ ++F
Sbjct: 746 EVLLGISKLIAPIVPFISEELF 767


>gi|269214495|ref|ZP_05986692.2| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209638|gb|EEZ76093.1| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 967

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 123 KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 182

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 183 KHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 242

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 243 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 295

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 296 DLDKLEHWPEQVKTMQR 312


>gi|150390863|ref|YP_001320912.1| isoleucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950725|gb|ABR49253.1| isoleucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 1033

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 110/230 (47%), Gaps = 14/230 (6%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  +    P  K V  +  IL K G K+SKS GN 
Sbjct: 539 ELFPADFICEGIDQTRGWFYSLLAISTFVMGKSPY-KNVLVNDLILDKEGSKMSKSKGNT 597

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP ++ ++ G DALR++L+          +D DGLK+ + +     + N+   +   + 
Sbjct: 598 VDPFQLFDQYGADALRWYLLHVSPAWTPTRFDVDGLKE-IQSKFFTTLENVY--TFFTLY 654

Query: 371 KDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-V 424
            + DG+ P           E D+ +LS  + V+ ++ +N+    + +A+ ++   V+E +
Sbjct: 655 ANNDGIDPNDFFIEYDQRPELDQWVLSKYNSVISDVEQNLAVYDLTKAVRKIQEFVNEDL 714

Query: 425 DRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKI 473
             ++  +       +  D+    +Y  T E++  +  L+  F P +A+++
Sbjct: 715 SNWYIRRARRRFWASELDQDKKAVYNTTYEILVGVCKLVAPFAPFIADEL 764


>gi|325290557|ref|YP_004266738.1| leucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965958|gb|ADY56737.1| leucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 827

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y      YP+   H+GH     I DV+ARF R+ G  VL   G D  G     AA
Sbjct: 30  DRQKFYALAMFPYPSGNLHMGHVRNYSIVDVIARFKRMQGYHVLHPIGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N  N R     + ISY  D  I T    ++   + ++ ++   G  Y
Sbjct: 90  IKNQTPPAEWTWKNIANMRSQLQEMGISYDWDREIATCHPEYYRWTQWIFLELYQHGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +         +++V  GA  +        V   + E +FF+++ Y ++LL+  
Sbjct: 150 KKKSAVNWCPSCNTVLANEQVVDGACERC----ETEVTKKDLEQWFFKITDYSEELLNDL 205

Query: 181 E---SHPEFILPIER 192
           E     PE +  ++R
Sbjct: 206 EKLTGWPEKVKTMQR 220



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +   G K+SKS GNV+ P E+I   G D  R F++      +D  + + G++
Sbjct: 568 ENLLTQGMVCMDGSKMSKSKGNVVSPEEIIGRFGADTARLFILFAAPPERDLEWSEQGVE 627


>gi|241767285|ref|ZP_04765017.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241362031|gb|EER58179.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 897

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  KNGVPPAKWTYENIAYMKKQMQAMGLAIDWSRE--VATCDPTYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y ++LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVI---DGKGWRTGAT-VEKREIPGYYLKITDYAEELLGF 205


>gi|317405767|gb|EFV86058.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 885

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   +  ++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPEYYKWNQWLFLKMLEKGV 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V    DG+ + +   PV+  E  GY+ R++ Y D+LL 
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRS-GAPVEKREIPGYYLRITDYADELLG 210


>gi|258542335|ref|YP_003187768.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633413|dbj|BAH99388.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636472|dbj|BAI02441.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639525|dbj|BAI05487.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642581|dbj|BAI08536.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645636|dbj|BAI11584.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648689|dbj|BAI14630.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651742|dbj|BAI17676.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654733|dbj|BAI20660.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 897

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           ++  W  +     +T G+ D      A+++P D+ V G DI+     +W A ++      
Sbjct: 468 VLDTWFSSALWPFSTLGWPDKTP-ELARYYPTDVLVTGFDII----FFWVARMMMMGQHF 522

Query: 283 --NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  + +F HG +  + G+K+SKS GN IDP+E+I++ G DA+R+ +      G+D
Sbjct: 523 MHDVPF-RNIFIHGLVRDEHGQKMSKSKGNGIDPLELIDQYGADAMRFTICALTGIGRD 580



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA  M + D L R+ R+ G D L+  GTD           +AG+ T++ V++ 
Sbjct: 50 HMGHALTMTLQDTLIRWKRMQGFDTLWQPGTD-----------HAGIATQMVVERT 94


>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511504|sp|C5D8P2|SYI_GEOSW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 923

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLVERDDLQR------PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E++G D LR ++
Sbjct: 576 PY-KAVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWV 620



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV--- 71
           Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A    GV  K    
Sbjct: 58  YANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALTKKGVDRKSMSV 117

Query: 72  ---------FVDQNSRNFRDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
                    +  +   N R+    L +  D +    T K  ++  +I ++ +++ KG IY
Sbjct: 118 AEFRKLCEQYAYEQINNQREQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPVYWSPSSESALAEAEI 198


>gi|217977850|ref|YP_002361997.1| valyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217503226|gb|ACK50635.1| valyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 902

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 12/122 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D+    K +++P  + + G DI+     +W A ++  
Sbjct: 469 DPD-VLDTWFSSALWPFSTLGWPDDASELK-RYYPTSVLITGFDII----FFWVARMMMM 522

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +V      LH      KG K+SKS GNVIDP+E+I++ G D+LR+ L    A G
Sbjct: 523 GLHFMGEVPFRDIYLHALVRDQKGAKMSKSKGNVIDPLELIDQYGADSLRFTLAAMAAQG 582

Query: 337 KD 338
           +D
Sbjct: 583 RD 584



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + D+LARF R+ G DVL+  GTD           +AG+ T+  V++ 
Sbjct: 52 HMGHALNATLQDILARFERMRGKDVLWQPGTD-----------HAGIATQTVVERQ 96


>gi|325971491|ref|YP_004247682.1| valyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026729|gb|ADY13488.1| Valyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 882

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 44/277 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L  +        P    N    ++++ + D  +SR+ + WG +IP   
Sbjct: 362 WFVSMKGMAEKALQAWRDEKVVFYPKRWENTYTHWLEN-IHDWCISRQLW-WGHRIPVWE 419

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                       DP                ++  W  +     +T G+        A ++
Sbjct: 420 CQDCKQVIVARQDPTECPNCHSANLVQETDVLDTWFSSWLWPFSTLGW-PQKTADLATYF 478

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNV 310
           P    V   DI+ F    W + ++ A+L L      + ++  G +  K G K+SKSLGN 
Sbjct: 479 PTSTLVTAYDIIFF----WVSRMIMASLELMGEVPFRDIYITGLVRDKQGRKMSKSLGNG 534

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVI++ G DA+++ L      G+D   D D    R+ +  AN + N  +R + M L
Sbjct: 535 IDPLEVIDQYGADAMKFTLSYMATQGQDILIDMDSF--RLGSRFANKVWN-AARFLLMNL 591

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +  + +  +    T  D  I +  +   Q ++  ++N
Sbjct: 592 EGVNLIPVSMVTLTTMDTWIYNQLNVAAQNVQIALEN 628



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 16/101 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D+L R++R+ G   L+  GTD           +AG+ T+  V++     
Sbjct: 53  HMGHALNNSLQDILTRYYRMTGRPTLWVPGTD-----------HAGIATQNIVERQLA-- 99

Query: 81  RDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGD 118
           ++     D+  D FI  T   +++HH   +   +KI    D
Sbjct: 100 KEGLRRQDLGRDRFIERTWQVKEKHHGIIKQQLQKIGSSCD 140


>gi|256061831|ref|ZP_05451966.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325835|ref|ZP_05965032.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301815|gb|EEY05312.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 877

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  I +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDIYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|298530509|ref|ZP_07017911.1| valyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509883|gb|EFI33787.1| valyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 884

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 135/330 (40%), Gaps = 54/330 (16%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDAL 235
           ++D  +SR+ + WG +IP              +DP              Q ++  W  + 
Sbjct: 400 IRDWCISRQIW-WGHRIPAWTCLDCGELMVTKEDPTVCTRCESSRLEQDQDVLDTWFSSA 458

Query: 236 TNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
               +T G+   PD ++   KF+P  + V   DIL F    W A ++   +   ++V   
Sbjct: 459 LWPFSTLGW---PDDTRDLQKFYPTSVLVTAFDILFF----WVARMMMMGVHFMEQVPFR 511

Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +H       G+K+SKS GNVIDP+ ++++ G DA R+ L    A G+D    +D ++
Sbjct: 512 DVYIHALVRDASGQKMSKSKGNVIDPLLMMDKYGTDAFRFTLTSLAAMGRDIKMSEDRVE 571

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              +    N I N  +R   M L++             + + IL     V   +R+ ++N
Sbjct: 572 GYRH--FINKIWN-AARFSLMHLQEPPRRFHASAVDGLAHQWILHRLEEVKDRVRDAVEN 628

Query: 408 QLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   +   V  S  D Y +  KP EL   +            +V+ ++ ILL   
Sbjct: 629 YRFNDAAQTMYQFVWHSFCDWYLELIKP-ELYGEDEAAKEQARSNLSQVLSEIIILLHPM 687

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +P    +I+  L      R  Q L + L P
Sbjct: 688 IPFATQEIWSRL----PGRENQDLSRELYP 713



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQN 64
           S  I  PN     H+GHA  + + D+L R+HR  G DVL+  GTD  G   Q + + +  
Sbjct: 40  SIVIPPPNVTGTLHMGHALNLTLQDILCRYHRQQGYDVLWVPGTDHAGIATQNVVEKSLA 99

Query: 65  AGVTTKV------FVDQ--------NSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRIL 109
           A  TT+       FV Q          +    ++ +   + +     T +       R +
Sbjct: 100 AQGTTRQDLGREEFVRQVWQWKEEYGGKILNQISRIGASVDWSRLRFTMDDGLSRAVREV 159

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           + K+ ++G IY+G Y   + +R     +D E+ Y   DG  Y+ ++
Sbjct: 160 FVKLYEQGLIYQGDYIINWCIRCHTALSDLEMEYSEVDGGLYHLRY 205


>gi|148237378|ref|NP_001085563.1| leucyl-tRNA synthetase 2, mitochondrial [Xenopus laevis]
 gi|49115146|gb|AAH72935.1| MGC80460 protein [Xenopus laevis]
          Length = 900

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 75  KSKSKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 134

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    + ++N ++ R+  + + +  ++D  I T  + ++   + L+ K+ + G  
Sbjct: 135 AIEHGLRPDTWTERNIKHMREQLERIGLCFNWDREITTCSEDYYKWTQYLFLKMYEAGLA 194

Query: 120 YK 121
           Y+
Sbjct: 195 YQ 196


>gi|27464485|gb|AAO16101.1| methionyl-tRNA synthetase MetG [Haemophilus influenzae biotype
           aegyptius]
          Length = 213

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120


>gi|225552401|ref|ZP_03773341.1| leucyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371399|gb|EEH00829.1| leucyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYNVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE I  ++R
Sbjct: 213 LEELEWPESIKEMQR 227


>gi|161528985|ref|YP_001582811.1| valyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160340286|gb|ABX13373.1| aminoacyl-tRNA synthetase class Ia [Nitrosopumilus maritimus SCM1]
          Length = 771

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 23/155 (14%)

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P + +  +    K G  + +   +TFD               W+D+  + L  T Y D  
Sbjct: 431 PWKEKCPIEKCTKCGNGEFTGEDRTFD--------------TWMDSSVSPLFVTKY-DKD 475

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-----HKGEKI 303
                K +P  L    KDI+R    Y    LL  ++   KK ++  +I+      KG K+
Sbjct: 476 SEFFEKTYPTSLRPQAKDIVRTWLYY---TLLRCDMLTGKKPWTEAWIMGYGLDEKGMKM 532

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           SKS GN IDP+ VIE+ G D  R++   EI  G D
Sbjct: 533 SKSKGNAIDPLPVIEKFGADTFRFWSASEINHGYD 567


>gi|116335004|ref|YP_802499.1| methionyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235285|dbj|BAF35133.1| methionyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 432

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 53/317 (16%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLAR-FHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +YI++A+ Y N   HIGH +EM  A+  +  +++L+   V   +G D HG  + K +   
Sbjct: 1   MYITSALPYINNILHIGHIFEMFYAEYNSLIYNKLNNFKVF--SGLDCHG--LIKKSNFK 56

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK----GDIYK 121
            +     +  N  N       L+I ++  I    KR    C  ++  ++D     G+I K
Sbjct: 57  KIFKLNIIKINYFN-------LNIDFNKTITLINKR---ICNWIYLFLNDNNYLFGNINK 106

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             ++     +++ ++  D+ Y      Y  ++ N   +  +   F        K + Y  
Sbjct: 107 QLFN-----KEKRFFIPDK-YINYICFYCKSKINDFCFKCKNQKFLLKIKILKKNIIY-- 158

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                     R+   I F      + ++SR     G  I        YVW DAL +Y++ 
Sbjct: 159 ----------RKTFNIYFKNYKFLNWNISRSKNYVGFLILSKINIYFYVWFDALISYIS- 207

Query: 242 TGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFI 296
               +N    K KF    L  +IGKDIL FH       L    L + K    K+  HGFI
Sbjct: 208 ----NNLKFIKKKFLNKKLIQIIGKDILYFHK------LFRVILKIIKFKNNKIIIHGFI 257

Query: 297 LHKGEKISKSLGNVIDP 313
           L    KISKS  N ++ 
Sbjct: 258 LILNNKISKSKKNNLEK 274


>gi|325973221|ref|YP_004250285.1| leucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651823|gb|ADX97905.1| leucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 743

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  HIGH    + +D++AR+ ++ G  VL   G D  G    + A
Sbjct: 40  KPKFYVLDMFPYPSGAGLHIGHVKGYLASDIVARYKKMKGFSVLHPMGWDSFGLPAEQYA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKG-D 118
                    F ++N   FR+    L  SYD     I +++  ++   + L+ ++  +G  
Sbjct: 100 IQNKADPSTFTEKNISRFREELKSLFFSYDFQNKEINSSDSSYYAITQWLFLQLYRRGLA 159

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKL 176
             +     W         N +E+Y+G DG++Y+ + N PV   + + +  +++ Y   L
Sbjct: 160 TLENKQVNWVEELHTVLAN-EEIYEGEDGKFYSERGNFPVTTRKLKQWVLKITKYAQAL 217


>gi|312147934|gb|ADQ30593.1| leucyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|312880110|ref|ZP_07739910.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783401|gb|EFQ23799.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 931

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++L        P+ S    WPADL++ G D  R  F      +     + 
Sbjct: 533 IMDVWFDSGVSHLAVLE--TRPELS----WPADLYLEGSDQHRGWFQTSLLTSVATRGSA 586

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGFI+  +G K+SKSLGNV  P EVI+  G D LR ++ 
Sbjct: 587 PF-RTVLTHGFIVDGEGRKMSKSLGNVTRPQEVIDRYGADILRLWVA 632


>gi|293397732|ref|ZP_06641938.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611678|gb|EFF40747.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|224533700|ref|ZP_03674288.1| leucyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224512993|gb|EEF83356.1| leucyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|310817225|ref|YP_003965189.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755960|gb|ADO43889.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 854

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKRATGHAVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
             +G   K +  QN  + RD    L  S D   +F  T +  ++   + L+  +  K  +
Sbjct: 90  MASGGHPKDWTYQNIADMRDQMKPLGFSIDWSREFA-TCDPEYYGQQQALFIDMLAKDLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  +      N+  +    DG+ + +  + V+  E   +FF++S Y D+LLS
Sbjct: 149 YRKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAD-VERRELTQWFFKISHYSDELLS 203


>gi|216264383|ref|ZP_03436375.1| leucyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980856|gb|EEC21663.1| leucyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|86357439|ref|YP_469331.1| valyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281541|gb|ABC90604.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Rhizobium etli
           CFN 42]
          Length = 947

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            ++ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDENGDPVEPFHTIYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDIMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|58584862|ref|YP_198435.1| leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311620|sp|Q5GS31|SYL_WOLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58419178|gb|AAW71193.1| Leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 865

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y+     YP+ + H+GH    +I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 25  EQGKCYVLEMFPYPSGKIHMGHLRNYVIGDVIARYKRACGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           ++  V    +  +N  N R     + +SY+
Sbjct: 85  RDNNVNPAAWTKENIDNMRAQLKSIGLSYN 114



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 288 KKVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           K++ + G  +  G  EK+SKS  N +DP  +IE+ G D  R F++ +    KD  +  DG
Sbjct: 592 KRLITQGAKIQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSNDG 651

Query: 346 LK 347
           ++
Sbjct: 652 VE 653


>gi|42518905|ref|NP_964835.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583191|gb|AAS08801.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 935

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 531 ILDVWFDSGSSW---AGVMQERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 584

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 585 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 630



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K  
Sbjct: 65  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 122


>gi|27379586|ref|NP_771115.1| valyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81737134|sp|Q89LR8|SYV_BRAJA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27352738|dbj|BAC49740.1| valyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 958

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 35/267 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ ++    + +++P +  V G DI+     +W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPEDAPEVQ-RYYPTNALVTGFDII----FFWVARMMMMGLHF 549

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+V      +H      KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D  
Sbjct: 550 MKEVPFSTIYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTLAAMAAQGRD-- 607

Query: 341 YDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIP---TPGAFTES-DESILSVC 394
                   ++      G  N  ++  + S   +     +P    P    E+ +  I    
Sbjct: 608 -------IKLATSRVEGYRNFATKLWNASRFAEMNHCAVPEGFEPAKAKETLNRWIAHES 660

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VLY 449
           +   +E+ E ++    + A   +   V  V  D Y +  KP  L   +P +  T   V +
Sbjct: 661 AHTTREVTEAIEAYRFNDAAGAIYRFVWNVYCDWYVELAKPVLLGPDSPAKDETRAMVAW 720

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
              E+++    LL  F+P +  +++++
Sbjct: 721 ARDEILK----LLHPFMPFITEELWEV 743



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 4  REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          R+ +  +  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD         
Sbjct: 33 RDAVPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTD--------- 83

Query: 62 AQNAGVTTKVFVDQN 76
            +AG+ T++ V++ 
Sbjct: 84 --HAGIATQMVVERQ 96


>gi|322379139|ref|ZP_08053536.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380431|ref|ZP_08054633.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147142|gb|EFX41840.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148435|gb|EFX42938.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 815

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 20/178 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI + + YP+ + H+GH     I D LAR++R  G +VL     D  G     AA 
Sbjct: 33  KPKKYILSMMPYPSGEVHMGHVRNYAIGDALARYYRQVGYNVLHPMAFDAFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS--------D 115
              +  K++ ++N  N ++    L  S+      ++ R   TC   + KI          
Sbjct: 93  KHQIHPKIWTEKNIANMQEEFKALGFSF------SKTREFATCDPNYTKIEQQFFIEMFS 146

Query: 116 KGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           KG +Y K  +  W  L      N+  +    DG+ +      VQ  +   Y+ R++ Y
Sbjct: 147 KGLVYQKEAWLNWCPLDHTVLANEQVI----DGKCWRCGSAVVQ-KQMPQYYLRITKY 199



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           + G +L  G K+SKS GNV+ P E++E+ G D  R ++
Sbjct: 571 TQGMVLKNGAKMSKSKGNVVTPQEILEKYGADIARAYI 608


>gi|225678561|gb|EEH16845.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 925

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 52/193 (26%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI     YP+   H+GH     IAD+LARF  + G DVL   G D  G     AA 
Sbjct: 67  KEKAYILAMFPYPSGTLHMGHVRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAAI 126

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    +  QN  N ++    +   +D                 W +++       GC
Sbjct: 127 ERGIDPAQWTMQNIANMKEQLRAIGAHFD-----------------WNRVN-----ANGC 164

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL----SY 179
              W S              GA           V+ +E + +FFR++A+++ LL    + 
Sbjct: 165 --SWRS--------------GAK----------VKKVELKQWFFRITAFKEALLKDLDAL 198

Query: 180 YESHPEFILPIER 192
            +  PE +L ++R
Sbjct: 199 ADGWPERVLSMQR 211


>gi|223888688|ref|ZP_03623279.1| leucyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885504|gb|EEF56603.1| leucyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|15618018|ref|NP_224302.1| valyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835629|ref|NP_300153.1| valyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752950|ref|NP_445222.1| valyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241429|ref|NP_876370.1| valyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6226196|sp|Q9Z987|SYV_CHLPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4376354|gb|AAD18247.1| Valyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189594|gb|AAF38490.1| valyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978467|dbj|BAA98304.1| alyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33235937|gb|AAP98027.1| valyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 940

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 103/277 (37%), Gaps = 72/277 (25%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +L ++  +   E YK   G  Y +      ++ ++ +F  +S ++  L  + ES    I 
Sbjct: 328 ALEEQGLFVRKEPYKLRVGVSYRSGAVIEPYLSKQ-WFVSVSEFRGALREFVESQDIKIF 386

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------DDPQYIMY------------- 229
           P +     +S+V   L+D  +SR+ + WG +IP      DD + + Y             
Sbjct: 387 PKDFVKNYLSWVNH-LRDWCISRQLW-WGHRIPVWYHKNDDERVLCYDGEGIPEEVAQDP 444

Query: 230 -----------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                       W  +    LT  G+ D       KF+P  L V G DIL F        
Sbjct: 445 DSWYQDPDVLDTWFSSGLWPLTCLGWPDENSPDLKKFYPTALLVTGHDILFFWVTRMVLL 504

Query: 279 LLSANLPLP-KKVFSHGFILHKG-----------------------------------EK 302
             S +   P  +VF HG I  K                                    EK
Sbjct: 505 CSSMSGEKPFSEVFLHGLIFGKSYKRYNDFGEWSYISGKEKLAYDMGEALPDGVVAKWEK 564

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +SKS GNVIDP+E+I   G DA+R  L    +C   G
Sbjct: 565 LSKSKGNVIDPLEMIATYGTDAVRLTLC---SCANRG 598



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 50/172 (29%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD---QNS 77
           H+GHA    + DVL R+ R+ G +V +  GTD           +AG+ T+  V+   Q S
Sbjct: 54  HMGHALVNTLQDVLVRYKRMSGFEVCWIPGTD-----------HAGIATQAVVERHLQAS 102

Query: 78  RNFRDMADVLDISYDDFIR-------------------------------TTEKRHHDTC 106
              R      D S +DF++                               T E   +   
Sbjct: 103 EGKRRT----DYSREDFLKHIWAWKEKSEKVVLSQLRQLGCSCDWDRKRFTMEPLANRAV 158

Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  +K + + G IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V
Sbjct: 159 KKAFKTLFENGYIYRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRMV 210


>gi|260441266|ref|ZP_05795082.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291044613|ref|ZP_06570322.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011507|gb|EFE03503.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|254490598|ref|ZP_05103784.1| leucyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464342|gb|EEF80605.1| leucyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 818

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK +  +   YP+ Q H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFFCLSMFPYPSGQLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  QN    R     L ++YD    + T +  ++   + L+ ++  KG +YK
Sbjct: 92  KNQVAPADWTYQNIDYMRGQLQRLGLAYDWERELATCKPDYYRWEQWLFTRLYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              S  +   D     +++V  G     G     +  P QW      F +++ Y D+LL+
Sbjct: 152 KTASVNWDPVDNTVLANEQVIDGRGWRSGALVEKRDIP-QW------FMKITDYADQLLA 204



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+S + P  K + + G +L  G K
Sbjct: 518 RADYWLPVDQYIGGIEHAVLHLLYARFFHKLMRDEGLVSGDEPF-KNLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP  +I++ G D  R F++
Sbjct: 577 MSKSKGNTVDPQALIDQYGADTARLFMM 604


>gi|145630904|ref|ZP_01786681.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
 gi|144983564|gb|EDJ91032.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
          Length = 254

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I
Sbjct: 67  GITPEELIAKAKADHVRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120


>gi|15594596|ref|NP_212385.1| leucyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|6919977|sp|O51267|SYL_BORBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2688147|gb|AAB91495.1| leucyl-tRNA synthetase (leuS) [Borrelia burgdorferi B31]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|296394167|ref|YP_003659051.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181314|gb|ADG98220.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 902

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAF----------LLSANLPLPKKVFS----HGFIL- 297
           A F+P  L V G DIL F A+    F             A  PL +  F     HG +  
Sbjct: 471 AAFYPVSLLVTGYDILFFWAVRMAMFGGWASRAGQSAAQAQRPLAQAPFRQLWFHGLVRD 530

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLAN 356
            KG+K+SK+ GNVI+P++ ++  G DA R+ L+R +  G D    + + +  R   +   
Sbjct: 531 EKGQKMSKTKGNVINPLDWLDRFGADATRFALLRGVVPGSDVPLGESNAIAAR---NFVT 587

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            + N    ++     D  G  P   + TE+D  IL     V  E    ++
Sbjct: 588 KLFNATRFALLSGASDGFGSDPAHASLTEADRWILGRLEAVRAETDSALE 637



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 27/178 (15%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   S  +  PN     H+GHA E  + D + R  R+ G +VL+  G D H     +AA
Sbjct: 36  EKPKFSIVVPPPNVTGNLHVGHAMEHAVMDAVCRRKRMQGFEVLYLPGFD-HASIATQAA 94

Query: 63  ---QNAGVTT-------KVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKR 101
              Q A   T       + F+ +            S   R + D +D S + F  T +  
Sbjct: 95  IERQLADEGTNRHELGREAFLARAFAWKEEVRGNISAQMRRLGDSVDWSRERF--TMDDG 152

Query: 102 HHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                R ++K++ D G +Y+      W   +  A  + + V+K  DG+  + ++  ++
Sbjct: 153 MVKAVRTIFKQLFDAGLVYQAERLVNWSPKQRTAISDAEVVHKEVDGELVSLRYGSLR 210


>gi|296110539|ref|YP_003620920.1| leucyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832070|gb|ADG39951.1| leucyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 803

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D+++RF R  G +VL   G D  G    + A
Sbjct: 30  KPKYYAVDMFPYPSGQGLHVGHPEGYTATDIMSRFKRTQGFNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F  QN  +FR+    L +SYD    I TT+ + +   + +++K+ +KG  Y
Sbjct: 90  LKTGHNPADFTSQNVAHFREQIKSLGLSYDWNREINTTDPKFYKWTQWIFEKLYEKGLAY 149

Query: 121 K 121
           +
Sbjct: 150 E 150



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 513 DSDKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGAN 572

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +++   G D LR + +      ++  + ++G+          G  
Sbjct: 573 HEKMSKSKGNVVNPDDIVAAFGADTLRVYEMFMGPLTQNKPWSEEGI---------TGSR 623

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +++ D D +      +   D  +  + ++ ++++ E+++N   + A++Q++ 
Sbjct: 624 RWLDRVWRLLIDDNDRLRDHVTTYNPGD--LDKIYNQTVKKVTEDLENMRFNTAISQMMV 681

Query: 420 LVSEV 424
            V+E 
Sbjct: 682 FVNEA 686


>gi|50954900|ref|YP_062188.1| leucyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657969|sp|Q6AEW2|SYL_LEIXX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50951382|gb|AAT89083.1| leucyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 866

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 14/180 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + Y+     YP+   H+GHA    + DV+AR+ R  G  VL   G D  G     AA 
Sbjct: 49  RPRKYVLDMFPYPSGDLHMGHAEAYALGDVIARYWRHQGFSVLHPIGWDAFGLPAENAAI 108

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+  + +    + Q   + R  A   D  +D  ++T +  ++   + L+ K+ +KG  
Sbjct: 109 KRGLDPRGWTYDNIAQQKASMRRYAPSFD--WDRVLQTCDPSYYKWNQWLFLKLYEKGLA 166

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +   D+    +++V  G   +  N   +    QW      +FR++ Y D+LL
Sbjct: 167 YRKASQVNWCPFDQTVLANEQVVNGRCERCDNLVTKKKLTQW------YFRITDYADRLL 220


>gi|110633924|ref|YP_674132.1| valyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284908|gb|ABG62967.1| valyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 926

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K  A ++P  + V G DI+     +W A ++   L
Sbjct: 495 VLDTWFSSALWPFSTLGW---PEKTKELATYYPTSVLVTGFDII----FFWVARMMMMGL 547

Query: 285 PLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +     V+ H  +  K G K+SKS GNVIDP+E+I++ G DALR+ L    A G+D
Sbjct: 548 HFTGREPFHTVYVHALVRDKNGAKMSKSKGNVIDPLELIDQYGADALRFTLAIMAAQGRD 607


>gi|254501366|ref|ZP_05113517.1| leucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222437437|gb|EEE44116.1| leucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 874

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 20/188 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARFKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  +N    R+   ++ +S D   +F  T +  ++   + L+ K  + G +Y
Sbjct: 93  QNKVHPKDWTYENIATMREQLKIMGLSLDWSREFA-TCDVAYYKQQQALFLKFLEAGLVY 151

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAYQD 174
            K     W  +      N+  +    DG+ + +     Q    QW      FF++S + +
Sbjct: 152 RKNAKVNWDPVDMTVLANEQVI----DGRGWRSGALVEQRELTQW------FFKISDFSE 201

Query: 175 KLLSYYES 182
            LL   E+
Sbjct: 202 DLLEAIET 209



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 22/180 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I+  G D  R+F++ +    +D  + +DG++         G   
Sbjct: 631 EKMSKSKKNTVDPTDIIDTYGADTARWFMLSDSPPERDVIWTEDGVQ---------GAWR 681

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            V R   +I +  +   P   +  A ++  E +     + L  +  +++    +RA+A++
Sbjct: 682 FVQRVWRLIGEIAEKTEPRNSSVPAMSQKAEDLRRATHKTLAAVSNDLEGLGFNRAVARL 741

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             LV+ + + F+     + K+          Y   E +  L  ++   +P LA + +  L
Sbjct: 742 YELVNTLSKAFNEGLEDQGKE----------YAVRETVDYLVQMMAPMMPHLAEECWSEL 791


>gi|84029519|sp|Q74JX6|SYI_LACJO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 928

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 524 ILDVWFDSGSSW---AGVMQERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 578 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 623



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|221217759|ref|ZP_03589227.1| leucyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225550089|ref|ZP_03771049.1| leucyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192436|gb|EEE18655.1| leucyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369201|gb|EEG98654.1| leucyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|22299641|ref|NP_682888.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|29337024|sp|Q8DH61|SYL_THEEB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22295825|dbj|BAC09650.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 857

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 41/90 (45%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  QKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARCRRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G+  +V+  QN    R     L +SYD
Sbjct: 91  IERGIHPRVWTQQNIGQMRQELQRLGLSYD 120



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 32/187 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P +VI++ G D  R F++ +    KD  +D   ++ +      N +  
Sbjct: 614 EKMSKSKYNGVAPGDVIQQYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLNRVWR 671

Query: 361 LVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           LV        K   G +  P P   T++++ +       ++EI E+++    ++ A+A++
Sbjct: 672 LVQ-----TFKAKGGRLGQPLPATLTKAEKDLRRAIHTAIKEISEDIEGDYQLNTAVAEL 726

Query: 418 ISL---VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + L   +S  D Y                      V  E I+ L  LL  F P ++ +++
Sbjct: 727 MKLSNALSSADCYTSG-------------------VYSEGIQTLLTLLAPFAPHISEELW 767

Query: 475 DILFVAD 481
             L   D
Sbjct: 768 HQLGGTD 774


>gi|324992208|gb|EGC24130.1| leucine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|327472938|gb|EGF18365.1| leucine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 858

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+ A  H+GH       D+L+R+ R    +VL   G D  G    +
Sbjct: 54  KDKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQCYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 227

Query: 176 LLSYYES--HPEFILPIER 192
           LL+  E    PE I  ++R
Sbjct: 228 LLNDLEELDWPESIKDMQR 246


>gi|240114919|ref|ZP_04728981.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600576|ref|ZP_06134743.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584707|gb|EEZ49383.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|331014752|gb|EGH94808.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 868

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 32/184 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADL 354
           EK+SKS  N IDP  +I++ G D  R F++        +     G        +RV    
Sbjct: 626 EKMSKSKKNGIDPQTMIDQYGADTCRLFMMFASPPDMSLEWSDSGVEGSHRFLRRVWRLA 685

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRA 413
              +G   S S+ +             A T+  +++     + +++  +++ QNQ  + A
Sbjct: 686 QAHVGQGASGSLDI------------AALTDEQKAVRRSIHQAIKQASQDIGQNQKFNTA 733

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +AQV++L++ +++   A        T  DRA     +  E +  + +LL    P +++++
Sbjct: 734 VAQVMTLMNVLEKAPQA--------TPQDRA-----LLQEGLETVTLLLAPITPHISHEL 780

Query: 474 FDIL 477
           +  L
Sbjct: 781 WTQL 784


>gi|254492977|ref|ZP_05106148.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226512017|gb|EEH61362.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|242279474|ref|YP_002991603.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511501|sp|C6BV89|SYI_DESAD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|242122368|gb|ACS80064.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 937

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 21/190 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +  K   +PADL++ G D  R  FH+    A + + ++
Sbjct: 541 ILDVWFDSGTSFAAVV------EKRKEHRFPADLYLEGSDQHRGWFHSSLL-ASVGTRDV 593

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HG+++ K G K+SKS+GNVI P E+I++ G + LR + V  +   +D     
Sbjct: 594 PPYKTVLTHGYVVDKDGRKMSKSIGNVIAPQEIIDQHGAEILRMW-VSAVNYQEDVRISD 652

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + L + V+          V  +   IL + DG  P   A   +D  +L +    L  +  
Sbjct: 653 EILSRMVDT------YRRVRNTCRYILGNLDGFNPETDAVAPAD--MLPIDHFALDLV-- 702

Query: 404 NMQNQLIHRA 413
           N Q+++I +A
Sbjct: 703 NRQHEVIQKA 712


>gi|161504177|ref|YP_001571289.1| leucyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189083145|sp|A9MKC8|SYL_SALAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160865524|gb|ABX22147.1| hypothetical protein SARI_02284 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 860

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LLS
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCDSK-VERKEIPQWFIKITAYADELLS 204


>gi|157692223|ref|YP_001486685.1| isoleucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680981|gb|ABV62125.1| isoleucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 921

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L K G K+SKSLGN IDP +V +++G + LR ++
Sbjct: 575 KAPY-KGVLSHGFTLDKEGRKMSKSLGNTIDPTKVAKQLGAEILRLWV 621



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D + RF  ++G    +  G D HG  I  A
Sbjct: 45  KGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIR-----------TTEKRHHD 104
             +N  V  K   + ++  FR + +      ++   + F R            T K  ++
Sbjct: 105 LTKNKKVKRK---EMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYE 161

Query: 105 TCRIL-WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             +IL + +++ +G IYKG     +S   E+   + E+
Sbjct: 162 AQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199


>gi|329667549|gb|AEB93497.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 928

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 524 ILDVWFDSGSSW---AGVMQERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 578 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 623



 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|304404030|ref|ZP_07385692.1| isoleucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304347008|gb|EFM12840.1| isoleucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 1031

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 18/262 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           ++ VW D+ +       Y   P G + KF   +PAD+   G D  R  F ++   + L +
Sbjct: 514 VIDVWFDSGSMPFAQQHY---PFGDQEKFADQYPADIICEGIDQTRGWFFSLLAVSTLFN 570

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K V S G IL   G+K+SKS GNVIDP E+I E G DA R+ L+ + A      
Sbjct: 571 GKAPY-KAVISTGHILDENGQKMSKSKGNVIDPWEIINEFGTDAFRWALLADSAPWNSKR 629

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           + + G+     + + + I N  + +   +    DG  P+   +  S    D  I+S  + 
Sbjct: 630 FSR-GIVGEAKSKVIDTIVN--THAFFALYASIDGYKPSEHTYQPSEAKLDRWIVSRLNS 686

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VI 455
           ++ ++ + ++          + + V E+  ++  +       +         Y T++ V+
Sbjct: 687 LIAQVSKGLEVNDFLNPAKLIETFVDELSNWYIRRSRDRFWGSGLTADKLAAYGTLQHVL 746

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L+ L+  + P +A  ++  L
Sbjct: 747 LTLSRLIAPYAPLVAEDVYGNL 768


>gi|289165660|ref|YP_003455798.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|288858833|emb|CBJ12747.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 824

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     I DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  +N  + +     L  +YD    I T    ++   +  + ++ +KG +YK
Sbjct: 92  KNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREISTCTPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITAYADELLSSLD 207

Query: 182 SHPEF 186
           S  E+
Sbjct: 208 SLDEW 212



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D +V G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 518 RAKYWTPVDQYVGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNV+DP  +I   G D  R F++
Sbjct: 577 MSKSVGNVVDPNHLINTYGADTARLFVM 604


>gi|240117203|ref|ZP_04731265.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268602893|ref|ZP_06137060.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587024|gb|EEZ51700.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|227889764|ref|ZP_04007569.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849628|gb|EEJ59714.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 939

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 535 ILDVWFDSGSSW---AGVMQERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 588

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 589 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 634



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K  
Sbjct: 69  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 126


>gi|227432378|ref|ZP_03914370.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351899|gb|EEJ42133.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 808

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 26/205 (12%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+EK Y+     YP+ Q  H+GH       D+++R+ R  G +VL   G D  G    + 
Sbjct: 29  EKEKYYVMDMFPYPSGQGLHVGHPEGYTATDIMSRYKRAKGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F ++N + F++  + L  S D    I TT+  ++   + +++K+ +KG  
Sbjct: 89  AIKTGNNPAGFTNKNVQVFKNQINSLGFSIDWSREINTTDPEYYKWSQWIFEKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA----------DGQYYNAQHNPVQWMEEEGYFFRL 169
           Y+          DE   N    + G           DG+     + PV     + +  R+
Sbjct: 149 YE----------DEIMVNWAPDFPGGGIVVANEEVIDGKTERGGY-PVYRKPMKQWVLRI 197

Query: 170 SAYQDKLLSYYE--SHPEFILPIER 192
           +AY D+LL   E    PE I   +R
Sbjct: 198 TAYADRLLEDLEDLDWPEAIKEQQR 222



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL + 
Sbjct: 518 DPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGEN 577

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P E++   G D LR + +      +   + +DG+         +G  
Sbjct: 578 HEKMSKSKGNVVNPDEIVNNYGADTLRVYEMFMGPLTQSKPWSEDGV---------SGSR 628

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +++ + D +        + D  +  +  + ++++ E+++N   + A++Q++ 
Sbjct: 629 RWLDRVWRLLVDEEDKLRDHVTTVNKGD--LDKIYHQTVKKVSEDLENMRFNTAISQLMV 686

Query: 420 LVSEV 424
            V+E 
Sbjct: 687 FVNEA 691


>gi|220932174|ref|YP_002509082.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782501|sp|B8CXR8|SYL_HALOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219993484|gb|ACL70087.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 830

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 10/196 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  Y+     YP+   H+GH     I DV+ARF R++G +VL   G D  G     AA
Sbjct: 31  DKDNYYVLEMFPYPSGNLHMGHVRVYSIGDVIARFKRMNGYNVLHPMGWDAFGLPAENAA 90

Query: 63  -QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
            ++  +  + +   N +N +     L +SY  D  + T ++ ++   +  + K+  KG  
Sbjct: 91  IKHGNIHPQDWTWDNIKNMKKQMKSLGLSYDWDREVTTAKEDYYKWTQWFFVKMFKKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    E    +++V   A           V+  E E +FF+++ Y ++LL  
Sbjct: 151 YKKKAAVNWCPGCETVLANEQVVNNA----CERCGTEVEEKELEQWFFKITNYAERLLED 206

Query: 180 Y---ESHPEFILPIER 192
           +   ++ PE +  ++R
Sbjct: 207 HKLLQNWPEKVKIMQR 222



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 107/234 (45%), Gaps = 27/234 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           K++P D ++ G +    H +Y   F        ++ +  P      + G +L  G K+SK
Sbjct: 530 KWFPVDQYIGGIEHAILHLLYARFFTKVIYDMDMIDSVEPF-TNWLAQGMVLKDGAKMSK 588

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+DP ++++  G D  R F++      KD  +   G++        N +  LV+ +
Sbjct: 589 SKGNVVDPEDILDRFGADTARLFILFAAPPEKDLEWSDRGVEGA--ERFLNRVWRLVADN 646

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           +  I K+ D       +F ++++ +       ++ + E++  +L  + A++ ++ L +  
Sbjct: 647 IKEI-KNTDQASLDVNSFNKNEKDLYRNLHVTIKRVTEDIGERLNFNTAISAIMELTNAT 705

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
            +Y +      ++K N        Y  + ++I ++ ++L  F P +  +++  L
Sbjct: 706 YQYLNG-----VEKVN--------YTLIKDIIEKMLLILAPFAPHMTEELWSEL 746


>gi|307298670|ref|ZP_07578473.1| isoleucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915835|gb|EFN46219.1| isoleucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 1047

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 22/272 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAI 273
           G ++   P+ ++  W D+    +    Y  +N D      +PAD    G D  R  F+++
Sbjct: 514 GGRMTRTPE-VIDCWFDSGAMPVAQHHYPFENKDNFMGDLFPADFICEGIDQTRGWFYSL 572

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              +  L    P  K V  +  +L K G+K+SKS GN +DP ++IE+ G D LR++L+  
Sbjct: 573 MSISTFLFGQSPY-KNVLVNNLVLDKNGQKMSKSKGNTVDPWKIIEKYGADTLRWYLLAV 631

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAF-------T 384
                   +D++G+K       +   G L S  S   +  + D +   PG F        
Sbjct: 632 SPPWVPTKFDEEGVKD----TFSKFFGTLHSVFSFFTMYANVDNV--DPGEFDLPVSERE 685

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDR 443
           E D  I+S  + +++E+ + + +  + +++  +   +V EV  ++  +       +  D 
Sbjct: 686 EVDRWIISRLNTLVREVTDLLNHYDMTKSVRAIQDFVVEEVSNWYVRRTRDRYWTSELDN 745

Query: 444 ASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
           +    Y+T+ EV+  +A L+    P  A +IF
Sbjct: 746 SKKAAYLTLYEVLLTVAKLMAPIAPFTAEEIF 777


>gi|268319697|ref|YP_003293353.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262398072|emb|CAX67086.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 939

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 535 ILDVWFDSGSSW---AGVMQERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 588

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 589 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 634



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K  
Sbjct: 69  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 126


>gi|240124950|ref|ZP_04737836.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268683529|ref|ZP_06150391.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268623813|gb|EEZ56213.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|226321243|ref|ZP_03796775.1| leucyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233349|gb|EEH32098.1| leucyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|71906184|ref|YP_283771.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|71845805|gb|AAZ45301.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 876

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RFH++ G +VL   G D  G     AA 
Sbjct: 38  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHKMQGYNVLQPMGWDAFGMPAENAAL 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    R     L   I ++    T    ++   + L+ ++ +KG +YK
Sbjct: 98  QNNVPPAGWTYSNIDYMRQQLKSLGFAIDWEREFATCTPEYYRWEQWLFTRLYEKGLVYK 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D     +++V  G     G     +  P+       Y+ +++AY ++LLS
Sbjct: 158 KLGTVNWDPVDHTVLANEQVIDGRGWRSGALIEKREIPM-------YYMKITAYAEELLS 210

Query: 179 YYESHP 184
             ++ P
Sbjct: 211 ELDNLP 216


>gi|238920810|ref|YP_002934325.1| leucyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511543|sp|C5BGC7|SYL_EDWI9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238870379|gb|ACR70090.1| leucyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 860

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDSK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 RLEEWPEQVKTMQR 221


>gi|224533101|ref|ZP_03673701.1| leucine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224511828|gb|EEF82229.1| leucine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 840

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|187478980|ref|YP_787004.1| leucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123766015|sp|Q2KXE5|SYL_BORA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115423566|emb|CAJ50102.1| leucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 885

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 10/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   +  ++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPAYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y+      +   D+    +++V    DG+ + +   PV+  E  GY+ R++ Y D+LL
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRS-GAPVEKREIPGYYLRITDYADELL 209


>gi|59800532|ref|YP_207244.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|240122757|ref|ZP_04735713.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268681358|ref|ZP_06148220.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|81311263|sp|Q5FAF5|SYI_NEIG1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59717427|gb|AAW88832.1| putative isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|268621642|gb|EEZ54042.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 929

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|312149440|gb|ADQ29511.1| leucyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 840

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|225549056|ref|ZP_03770031.1| leucyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370282|gb|EEG99720.1| leucyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 840

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|284048004|ref|YP_003398343.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952225|gb|ADB47028.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 829

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 33  RPKSYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMRGFNVLHPIGFDSFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG-DIY 120
              +    +  +N  N       L +SY  D  + T ++ ++   +  ++ +  +G  + 
Sbjct: 93  KHKIPPAKWTMENIANMTRQLKELGLSYDWDRKVVTCQEDYYKWTQWFFELMYKRGLAVK 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W         N+    +  DG+ +   H PV+  +   +FF+++ Y ++LL
Sbjct: 153 KEASVNWCDTCGTVLANE----QVEDGKCWRC-HQPVEKKQLSQWFFKITDYAEQLL 204



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 43/266 (16%)

Query: 232 IDALTNYLTTTGYL---DNPDGSKAKF-------W-PADLHVIGKDILRFHAIYWPAF-- 278
           +D +  +L ++ Y     +P   KA F       W P D ++ G +    H +Y   F  
Sbjct: 496 LDTMDTFLCSSWYYMRYTDPHNDKAPFSEEAVNHWMPVDQYIGGIEHAILHLLYSRFFMK 555

Query: 279 ------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
                 L+ A+ P    + + G ++  G K+SKSLGNV+ P E++ + G D  R F++  
Sbjct: 556 VLHDAGLVKADEPF-TNLLTQGMVIKDGAKMSKSLGNVVSPEEIVGKFGADTARLFIMFA 614

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDES 389
               ++  +   G++        N +  +V     ++ K    YD          E+DE 
Sbjct: 615 APVERELEWSDQGVEGSFR--FLNRVWRIVYHFKDVLAKKATSYDT-----AHLNEADEE 667

Query: 390 ILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +  +    ++++ E++  +   + A++ ++ LV+ +  Y +  +P             ++
Sbjct: 668 LRHILHVSVKKVTEDIDQRFNFNTAISTLMELVNALYAYREKAEP---------VNDGLV 718

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
           Y   E I +L ++L  F P +  +++
Sbjct: 719 Y---EAISKLLLMLAPFTPHITEELW 741


>gi|269139983|ref|YP_003296684.1| leucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985644|gb|ACY85473.1| leucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559816|gb|ADM42480.1| Leucyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 860

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDSK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEDWPEQVKTMQR 221


>gi|28493352|ref|NP_787513.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|48428542|sp|Q83GC6|SYL_TROWT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28476393|gb|AAO44482.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 806

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 25/213 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  + Y+    +YP+   H+GHA      D +AR+ R  G +VL   G D  G     AA
Sbjct: 43  ETPRKYVLDMFSYPSGDLHMGHAETYAYGDFIARYWRHRGYNVLHPVGWDSFGLPAENAA 102

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              G   KV+    +DQ +R+ R  A   D S    + T++  ++   + L+ K+   G 
Sbjct: 103 IKHGSDPKVWTYRNIDQQARSMRLYAASFDWSRR--LHTSDPEYYRWNQWLFLKLYKHGL 160

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            Y K  +  W    D     +++V      +   A   +    QW      F R++AY D
Sbjct: 161 AYRKKAWVNW-DPSDRTVLANEQVLPDGTSERSGALVVKKKLTQW------FLRITAYAD 213

Query: 175 KL---LSYYESH-PEFILPIER----RNEVISF 199
           +L   LS  E++ PE ++ ++R    R+E +S 
Sbjct: 214 RLLDDLSMLENNWPERVITMQRNWIGRSEGVSI 246


>gi|330963477|gb|EGH63737.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 868

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|238026215|ref|YP_002910446.1| leucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875409|gb|ACR27742.1| Leucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 864

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +   N     R  + M   +D S +  I T    ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIAYMKRQMQAMGLAIDWSRE--IATCNPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL 
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITQYADELLD 204

Query: 179 YYES 182
             E 
Sbjct: 205 DLEG 208


>gi|189083241|sp|Q47IN0|SYL_DECAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RFH++ G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHKMQGYNVLQPMGWDAFGMPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    R     L   I ++    T    ++   + L+ ++ +KG +YK
Sbjct: 92  QNNVPPAGWTYSNIDYMRQQLKSLGFAIDWEREFATCTPEYYRWEQWLFTRLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D     +++V  G     G     +  P+       Y+ +++AY ++LLS
Sbjct: 152 KLGTVNWDPVDHTVLANEQVIDGRGWRSGALIEKREIPM-------YYMKITAYAEELLS 204

Query: 179 YYESHP 184
             ++ P
Sbjct: 205 ELDNLP 210


>gi|152996926|ref|YP_001341761.1| leucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189030284|sp|A6VZE7|SYL_MARMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150837850|gb|ABR71826.1| leucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 815

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 13/205 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   Y  D  I T    ++   +  + ++ +KG  YK
Sbjct: 92  KHKTAPAKWTTENIAYMKGQLKELGFGYDWDREIATCTPEYYKWEQWFFTQLVEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +    N V+  E   +F R++ Y ++LL+   
Sbjct: 152 KTAAVNWCPEDQTVLANEQV---EDGCCWRCGTN-VEKKEISQWFIRITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISF 199
             +  PE +  ++R    R+E + F
Sbjct: 208 QLDGWPEKVKAMQRNWIGRSEGLEF 232



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 48/261 (18%)

Query: 252 KAKFW-PADLHVIGKD--ILR------FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D +V G +  IL       FH +   A L++++ P  K++ + G +   G K
Sbjct: 516 EANYWLPVDQYVGGVEHAILHLLYSRFFHKLLRDAGLVNSDEPF-KRLLTQGMVNKDGTK 574

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +DP E+IE+ G D +R F++      +   ++  G+         +G    +
Sbjct: 575 MSKSKGNTVDPQEMIEKYGADTVRLFMMFSAPPEQSLEWNDAGV---------DGASRFL 625

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL--------QEIRENMQ-NQLIHRA 413
            R  ++  +  +      G   E + + L+   + L        Q++ ++++  Q  + A
Sbjct: 626 RRLWALSYRHTNA-----GKVGELNIAELNGAQKALRRKTHETIQKVSDDIERRQTFNTA 680

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A V+ L +E+ ++ D+             +   L V  E +    +LL   VP +A+++
Sbjct: 681 IAAVMELCNEISKFEDS-------------SELGLAVEQEALEAATLLLSPIVPHIAHQL 727

Query: 474 FDILFVADE--NRCFQSLDQR 492
           +  L  +D   N  + +LD+ 
Sbjct: 728 WSELGHSDNIVNTPWPTLDEE 748


>gi|282851660|ref|ZP_06261025.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282557628|gb|EFB63225.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 933

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 529 ILDVWFDSGSSW---AGVMKERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 583 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 628



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRK 113


>gi|15902279|ref|NP_357829.1| leucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517205|ref|YP_815756.1| leucyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|32171543|sp|Q8DRB6|SYL_STRR6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122279358|sp|Q04MJ2|SYL_STRP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15457782|gb|AAK99039.1| Leucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116077781|gb|ABJ55501.1| leucyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 833

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGVGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++LL
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLL 204

Query: 178 S 178
           +
Sbjct: 205 N 205


>gi|294012492|ref|YP_003545952.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292675822|dbj|BAI97340.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 936

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 12/122 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +      T G+ D  +  K + +P DL + G DIL     +W A +   
Sbjct: 514 DPD-VLDTWFSSALWPFGTLGWPDETETLK-RHYPNDLLISGFDIL----FFWDARMAMQ 567

Query: 283 NLP----LP-KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +     +P +K++ HG +    G+K+SKS GNV+DP+ +I+  G DALR+F+    + G
Sbjct: 568 GMEFMGDVPWRKLYLHGLVRAADGQKMSKSKGNVVDPLGLIDRFGADALRFFMAAMESQG 627

Query: 337 KD 338
           +D
Sbjct: 628 RD 629



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 94/254 (37%), Gaps = 56/254 (22%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + D++ R+ RL G D L+  GTD           +AG+ T++ V++     
Sbjct: 51  HIGHALDNTLQDIVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQMEAR 99

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK-----GCYSGWYSLRDEAY 135
           +D             RT   R     ++   K    G I +     GC   W + R    
Sbjct: 100 QDK------------RTNYTREQFVEKVWEWKAESGGAITRQLRRLGCSMDWANER---- 143

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           +  DE +  A  + +   H             R   Y+DK L  ++  P F   I     
Sbjct: 144 FTMDEGFSKAVIKVFVELHR------------RGLLYRDKRLVNWD--PRFRSAISDLEV 189

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
               VK G       R     G+++ D   +I+       T  L       +P+ S+ + 
Sbjct: 190 ETQEVKGGFWHF---RYPLADGVRLADGADHIVVATTRPET-MLADMAVAVHPEDSRYR- 244

Query: 256 WPADLHVIGKDILR 269
                 VIGKDIL+
Sbjct: 245 -----DVIGKDILQ 253


>gi|15603079|ref|NP_246151.1| leucyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431887|sp|P57923|SYL_PASMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12721568|gb|AAK03298.1| LeuS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 860

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 6/183 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   +  D  + T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIDYMKNQLKILGFGFDWDREVTTCKPDYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGGLD 207

Query: 182 SHP 184
             P
Sbjct: 208 HLP 210


>gi|329943009|ref|ZP_08291783.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|325507049|gb|ADZ18687.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814556|gb|EGF84546.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 1043

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 22/263 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N + +++ F PAD    G D  R    ++   ++SA L
Sbjct: 514 YVFDCWFDSGAMPYAQNHYPFENQEATESGF-PADFIAEGLDQTR--GWFYTLTVISAAL 570

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K    +G +L + G K+SK L N   P+ ++   G DALR +L+  +    +  
Sbjct: 571 FDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADALRLYLLDSVVVKAEDL 630

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L N + +       +   D +       +++E D+ ILS    
Sbjct: 631 RFSDKGVESVLKQVLLPLTN-VLSFFKTYTDLYGFDANNYDKEEISYSEIDKWILSNLYT 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           V+ ++RE+M +  ++ A+   ++ + ++  ++     ++ WE   T PDR  A   LY  
Sbjct: 690 VVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT-PDRRAAFATLY-- 746

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+     ++  F+P ++  I+
Sbjct: 747 -EVLTVFCRVIAPFIPFISEDIY 768


>gi|218249906|ref|YP_002374774.1| leucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226695250|sp|B7J1H9|SYL_BORBZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218165094|gb|ACK75155.1| leucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 840

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|160872510|ref|ZP_02062642.1| isoleucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121309|gb|EDP46647.1| isoleucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 948

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 24/222 (10%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PA L + G D  R  F +    +  +++  P  K V +HGF +  KG K+SKSLGNVI 
Sbjct: 553 YPASLCLEGSDQYRGWFQSSLLTSIAMNSQAPY-KSVLTHGFTVDEKGHKMSKSLGNVIA 611

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL 370
           P +VI+ +G D LR + +      K+     + LK  V+A   + N I  L++      L
Sbjct: 612 PEKVIQRLGADILRLW-ISSTDYRKEMVVSDEILKHTVDAYRRIRNTIRFLLAN-----L 665

Query: 371 KDYDG--MIPTPGAFTESDESILSVCSRVLQEI---RENMQNQLIHRALAQVISLVSEVD 425
            D+D    IP P      D  IL   +R+ QEI    E  Q  LI++ + Q   +     
Sbjct: 666 HDFDSTDCIP-PSTLLSLDMWILERANRLQQEIINAYEGFQFHLIYQKV-QHFCINDLGG 723

Query: 426 RYFD--AQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILL 462
            Y D    + + L+K +  R S    + Y+   ++R LA +L
Sbjct: 724 FYLDIIKDRQYTLQKNSVARRSAQTALFYIAEAMVRWLAPIL 765


>gi|28572538|ref|NP_789318.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|48428543|sp|Q83HV5|SYL_TROW8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28410670|emb|CAD67056.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 806

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 25/213 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  + Y+    +YP+   H+GHA      D +AR+ R  G +VL   G D  G     AA
Sbjct: 43  ETPRKYVLDMFSYPSGDLHMGHAETYAYGDFIARYWRHRGYNVLHPVGWDSFGLPAENAA 102

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              G   KV+    +DQ +R+ R  A   D S    + T++  ++   + L+ K+   G 
Sbjct: 103 IKHGSDPKVWTYRNIDQQARSMRLYAASFDWSRR--LHTSDPEYYRWNQWLFLKLYKHGL 160

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            Y K  +  W    D     +++V      +   A   +    QW      F R++AY D
Sbjct: 161 AYRKKAWVNW-DPSDRTVLANEQVLPDGTSERSGALVVKKKLTQW------FLRITAYAD 213

Query: 175 KL---LSYYESH-PEFILPIER----RNEVISF 199
           +L   LS  E++ PE ++ ++R    R+E +S 
Sbjct: 214 RLLDDLSMLENNWPERVITMQRNWIGRSEGVSI 246


>gi|311110527|ref|ZP_07711924.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065681|gb|EFQ46021.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 930

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 529 ILDVWFDSGSSW---AGVMKERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 583 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 628



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRK 113


>gi|296110596|ref|YP_003620977.1| isoleucyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832127|gb|ADG40008.1| isoleucyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 931

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 20/203 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+ D      +PAD+++ G D  R  F++    +   + + 
Sbjct: 526 IMDVWFDSGSSWAGVMNTRDHLD------YPADMYLEGSDQYRGWFNSSLITSVAATGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF L  KG K+SKSLGN I P++V +++G++ LR + +  +   +D     
Sbjct: 580 PY-KNVLSQGFTLDGKGNKMSKSLGNTISPLDVADKMGIEILRLWTI-SVDTSQDMPVSN 637

Query: 344 DGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSV-CSRVLQ 399
           D LK+   +   L N +  L++ +      DY+      P A     +   SV  +  ++
Sbjct: 638 DILKQVSESYRKLRNTLRFLMANTT-----DYNATTDAVPFAERAGHDQYFSVLLNNFIK 692

Query: 400 EIRENMQNQLIHRALAQVISLVS 422
           ++R++  N   +    +VI+ V+
Sbjct: 693 DVRQSYDNYQFNDIFKRVINFVN 715



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQLTKAGYDRKSMKK 117

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIY 120
              RN  +D A   +D   +DF R            T           ++ +++ KG I+
Sbjct: 118 AEWRNLAKDFALTQVDKQRNDFKRLGIMADWEKPYITLLPEFEAAQLRVFGEMAGKGYIF 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGSKPVYWSWSSESALAEAEI 198


>gi|238853976|ref|ZP_04644333.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833421|gb|EEQ25701.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 933

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 529 ILDVWFDSGSSW---AGVMKERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 583 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 628



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRK 113


>gi|116629831|ref|YP_815003.1| isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095413|gb|ABJ60565.1| Isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 944

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F++    +  ++   
Sbjct: 540 ILDVWFDSGSSW---AGVMKERDGLG---FPADLYLEGSDQYRGWFNSSLITSVAVTGKA 593

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 594 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVA 639



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K
Sbjct: 69  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRK 124


>gi|308180989|ref|YP_003925117.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046480|gb|ADN99023.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 932

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YLD         +PADL++ G D  R  F++    +  +S
Sbjct: 526 IMDVWFDSGSSHQGVLAERSYLD---------YPADLYLEGSDQYRGWFNSSLITSVAVS 576

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K+V S GF L ++G K+SKSLGN I P +VI+++G + +R ++ 
Sbjct: 577 GHAPY-KQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVA 625



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 28/66 (42%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R+  ++G    +  G D HG  I +  + AG   K   D
Sbjct: 58  YANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYDRKKMTD 117

Query: 75  QNSRNF 80
              R  
Sbjct: 118 NEFREL 123


>gi|150020161|ref|YP_001305515.1| leucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|172048661|sp|A6LJM9|SYL_THEM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149792682|gb|ABR30130.1| leucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 823

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  DKKKFYNLVMFPYPSGTLHVGHVKNYVIGDIVARYKRMKGYNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               +  +V+  +N    R+    + ISYD   + I  TE+ ++   + ++ K+ + G  
Sbjct: 90  IKNKIHPEVWTFKNIDIIRNQIKKIGISYDWSREVITCTEE-YYKWTQWIFLKLYENGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +    +    +++V    DG+        V     E ++F+++ Y +KLL+
Sbjct: 149 YKKKAAVNWCPSCQTVLANEQV---VDGKCERC-GTEVTMKHLEQWYFKITDYAEKLLN 203



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 45/323 (13%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYL 239
           PE  LP++   +V  F+ +G   LSL  +  +        P       M  ++D+   YL
Sbjct: 448 PEKDLPVKLPKDV-EFLPTGQSPLSLDEQFLNTTCPKCGGPAKREADTMDTFVDSSWYYL 506

Query: 240 --TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIY--------WPAFLLSANLPLP 287
                   D P D     +W P D ++ G +    H +Y        +    L    P  
Sbjct: 507 RYINPKLEDKPFDTEDINYWMPVDQYIGGVEHAVLHLLYSRFITKVLYDLGYLKFEEPF- 565

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + +F+ G I   G K+SKS GNV+ P E+IE+ G D LR +++      KD  +   G++
Sbjct: 566 ENLFTQGMIYKDGWKMSKSKGNVVSPDEMIEKYGADTLRTYILFMAPPEKDAEWSDAGIE 625

Query: 348 --KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              R    L N I +++ R     +KD    +       + ++ +     + +++I E++
Sbjct: 626 GVNRFLKRLWNNIYSILPR-----IKDVK--VEKIELKNKQEKDLRRKLHQSIKKITEDI 678

Query: 406 QNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +     + A+A ++ L + +  Y ++ K   L             +  E++ +L ++L  
Sbjct: 679 EGGFKFNTAIAGLMELNNNLSEYLNSAKDLNLP------------LLRELVEKLTLILSP 726

Query: 465 FVPKLANKIF-----DILFVADE 482
           F P +A +I+     D L V +E
Sbjct: 727 FAPHMAEEIWHDLGNDTLVVNEE 749


>gi|28378792|ref|NP_785684.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|81631129|sp|Q88V89|SYI_LACPL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28271629|emb|CAD64535.1| isoleucine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 932

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YLD         +PADL++ G D  R  F++    +  +S
Sbjct: 526 IMDVWFDSGSSHQGVLAERSYLD---------YPADLYLEGSDQYRGWFNSSLITSVAVS 576

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K+V S GF L ++G K+SKSLGN I P +VI+++G + +R ++ 
Sbjct: 577 GHAPY-KQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVA 625



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 28/66 (42%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R+  ++G    +  G D HG  I +  + AG   K   D
Sbjct: 58  YANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYDRKKMTD 117

Query: 75  QNSRNF 80
              R  
Sbjct: 118 NEFREL 123


>gi|195941395|ref|ZP_03086777.1| leucyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 840

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|194014535|ref|ZP_03053152.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013561|gb|EDW23126.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 921

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L K G K+SKSLGN IDP +V +++G + LR ++
Sbjct: 575 KAPY-KGVLSHGFTLDKEGRKMSKSLGNTIDPTKVAKQLGAEILRLWV 621



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D + RF  ++G    +  G D HG  I  A
Sbjct: 45  KGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIR-----------TTEKRHHD 104
             +N  V  K   + ++  FR + +      ++   + F R            T K  ++
Sbjct: 105 LTKNKKVKRK---EMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYE 161

Query: 105 TCRIL-WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             +IL + +++ +G IYKG     +S   E+   + E+
Sbjct: 162 AQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199


>gi|57241991|ref|ZP_00369931.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017183|gb|EAL53964.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 808

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYAIGDALARYYRKMGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+       T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKTWTYENIAYMKKELFSLGFSFSKKRIFATSDPIYTKFEQEFFIKMYEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +   H   Q +   GY+ +++AY ++LL   ES
Sbjct: 152 ARVNWCENDQTVLANEQV---EDGKCWRCGHEVSQKV-MPGYYVKITAYAEELLKKLES 206



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 18/141 (12%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++ + G +L  G K+SKS GNV++P ++I++ G D  R F++      K+  ++ D L+ 
Sbjct: 565 RLLTQGMVLKDGAKMSKSKGNVVNPDDIIKKYGADTARLFILFAAPPAKELEWNDDALEG 624

Query: 349 --RVNADLANGIGNLVSRSVSMI-------------LKDYDGMIPTPGAFTES--DESIL 391
             R    L +    L S ++  I             LK Y+ +  +   +T+S    +++
Sbjct: 625 AYRFIVRLYDRALKLESGALEEISQVTLSKEEKYARLKVYEALKKSQEVYTKSFAFNTLI 684

Query: 392 SVCSRVLQEIRENMQNQLIHR 412
           + C   L  I    +NQ + R
Sbjct: 685 AACMEALNAIG-TCKNQALER 704


>gi|242043012|ref|XP_002459377.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
 gi|241922754|gb|EER95898.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
          Length = 977

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 52/209 (24%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  +    +K L   E+    ILP ER  ++ +   + +KD  +SR+ + WG +IP   
Sbjct: 431 WFVTMEPLAEKALHAVENGQLTILP-ERFEKIYNHWLTNIKDWCISRQLW-WGHRIPVWY 488

Query: 222 ----------------------------------DDPQYIMYVWIDALTNYLTTTGYLDN 247
                                              DP  ++  W  +     +T G+ D 
Sbjct: 489 IVGKKCEEDYIVARTEEEALAKAQEKYGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDL 547

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKG 300
                  F+P+ +   G DIL F    W A ++      + ++P    V+ HG I   +G
Sbjct: 548 SKEDYKHFYPSTVLETGHDILFF----WVARMVMMGIEFTGSVPF-SYVYLHGLIRDAEG 602

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            K+SK+LGNVIDP++ I++ G DALR+ L
Sbjct: 603 RKMSKTLGNVIDPLDTIKDYGTDALRFTL 631


>gi|298710134|emb|CBJ31846.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1036

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 51/218 (23%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F +      K L+  +     ILP ER N+V      G+ D  +SR+ + WG +IP   
Sbjct: 482 WFVKTEGMGAKALAAVQEKDIQILP-ERFNKVWHNWLDGIHDWCVSRQLW-WGHQIPVWY 539

Query: 222 --------------------------------DDPQYIMYVWIDALTNYLTTTGYLD--- 246
                                            DP  ++  W  +      + G+     
Sbjct: 540 ASGHDGYFVARSEEDARKQATDAGVPTDVSLDRDPD-VLDTWFSSGLWPFASVGWPQEEG 598

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKG 300
           N  G  + F+PA     G DI+ F    W A ++   + L  K     ++ HG +    G
Sbjct: 599 NDGGDLSNFYPAACLETGYDIIFF----WVARMVMMGIELTGKSPFDTIYLHGLVKDGNG 654

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K+SK+ GNV+DPI+ ++  G DALRY LV  +  G+D
Sbjct: 655 MKMSKTKGNVVDPIDTMDSYGTDALRYTLVTGVTPGQD 692



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 23/151 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTK-----V 71
           H+GHA    + D+L R+HR+ G   LF  G D  G      + +A    G+  K      
Sbjct: 172 HMGHAMGTTLQDILTRYHRMRGEPTLFLPGQDHAGIATQMLVERALAAEGIDRKEIGREA 231

Query: 72  FV--------DQNS---RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+        D+     R  R +    D S + F    E     T   +  ++ +KG +Y
Sbjct: 232 FLKKVWEWKEDKGGYIVRQMRRLGASADWSRERFTLDPEMSAAVTEAFV--RLHEKGLVY 289

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           +G Y   +S   +   +D EV Y   DG+ Y
Sbjct: 290 RGDYMVNWSPSLQTAVSDLEVEYSEEDGKLY 320


>gi|240112173|ref|ZP_04726663.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268598230|ref|ZP_06132397.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268582361|gb|EEZ47037.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 929

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIGDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|328914842|gb|AEB55675.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 1055

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 22/263 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N + +++ F PAD    G D  R    ++   ++SA L
Sbjct: 526 YVFDCWFDSGAMPYAQNHYPFENQEATESGF-PADFIAEGLDQTR--GWFYTLTVISAAL 582

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K    +G +L + G K+SK L N   P+ ++   G DALR +L+  +    +  
Sbjct: 583 FDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADALRLYLLDSVVVKAEDL 642

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L N + +       +   D +       +++E D+ ILS    
Sbjct: 643 RFSDKGVESVLKQVLLPLTN-VLSFFKTYTDLYGFDANNYDKEEISYSEIDKWILSNLYT 701

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           V+ ++RE+M +  ++ A+   ++ + ++  ++     ++ WE   T PDR  A   LY  
Sbjct: 702 VVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT-PDRRAAFATLY-- 758

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+     ++  F+P ++  I+
Sbjct: 759 -EVLTVFCRVIAPFIPFISEDIY 780


>gi|296284864|ref|ZP_06862862.1| isoleucyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 977

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 11/116 (9%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW D+   ++    ++   D   A  WPA+L++ G D  R  F +   
Sbjct: 593 PDDFEMVHDILDVWFDSGCTHV----FVLESDRWPALTWPANLYLEGSDQHRGWFQSSLL 648

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       P   +V +HGF +   G K+SKSLGN +DP++++E+ G D LR + +
Sbjct: 649 ESCATRGRAPY-DQVLTHGFTMDQNGRKMSKSLGNTVDPLKIVEQYGADILRLWAL 703


>gi|294637503|ref|ZP_06715789.1| leucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089335|gb|EFE21896.1| leucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 860

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREIATCKPDYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDSK-VERKEIPQWFIKITDYADQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEDWPEQVKTMQR 221


>gi|294660540|ref|NP_853350.2| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286869|sp|Q7NAR7|SYV_MYCGA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|284812203|gb|AAP56918.2| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930843|gb|ADC30782.1| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 860

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 31/250 (12%)

Query: 257 PADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           P  L V   DI+ F  +   + ++LL  ++P    +  HG IL +   K+SKSL N +DP
Sbjct: 480 PNSLLVTAYDIVFFWVLRMIFMSWLLKKSIPF-HDLLLHGLILDEHNRKMSKSLNNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           I++I++ G DALR FL    + G+D  Y+ +  K    A   N + NL +R + +I    
Sbjct: 539 IQIIDQYGADALRLFLTSNTSPGEDVSYNVE--KINAAASFLNKLWNL-ARYLKLI---- 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
           D    T       D  I+   + V   I++ ++      +  Q+   + +   + Y +  
Sbjct: 592 DQSKLTDQPLDSLDHWIIHRFNEVNAGIQDKLKEYRFALSNKQLSDFIWDDFANVYIELN 651

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           K  +  K   + A+       ++ R+  I+L   VP +  +I++    +D          
Sbjct: 652 KKAQWSKAKFELAN-------DIFRKFLIMLHPSVPFITEQIYNTFEFSDS--------- 695

Query: 492 RLKPGFMLHK 501
             KP  +L K
Sbjct: 696 --KPSIILEK 703


>gi|57237973|ref|YP_179222.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73621970|sp|Q5HU13|SYL_CAMJR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57166777|gb|AAW35556.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058532|gb|ADT72861.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 809

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I DVLAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDVLARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|313848165|emb|CBY17166.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci RD1]
          Length = 1043

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 22/263 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N + +++ F PAD    G D  R    ++   ++SA L
Sbjct: 514 YVFDCWFDSGAMPYAQNHYPFENQEATESGF-PADFIAEGLDQTR--GWFYTLTVISAAL 570

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K    +G +L + G K+SK L N   P+ ++   G DALR +L+  +    +  
Sbjct: 571 FDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADALRLYLLDSVVVKAEDL 630

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L N + +       +   D +       +++E D+ ILS    
Sbjct: 631 RFSDKGVESVLKQVLLPLTN-VLSFFKTYTDLYGFDANNYDKEEISYSEIDKWILSNLYT 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           V+ ++RE+M +  ++ A+   ++ + ++  ++     ++ WE   T PDR  A   LY  
Sbjct: 690 VVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT-PDRRAAFATLY-- 746

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+     ++  F+P ++  I+
Sbjct: 747 -EVLTVFCRVIAPFIPFISEDIY 768


>gi|239998201|ref|ZP_04718125.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268594054|ref|ZP_06128221.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547443|gb|EEZ42861.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317163487|gb|ADV07028.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 929

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|123968505|ref|YP_001009363.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166231630|sp|A2BR45|SYL_PROMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123198615|gb|ABM70256.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 856

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 11/182 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     AA  
Sbjct: 44  DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIE 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY-K 121
            G++  V+  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +Y K
Sbjct: 104 RGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKSGLVYQK 163

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLLSY 179
                W  + +    N+    +G   +        +  QW      F R++ Y D+LL  
Sbjct: 164 ESEVNWDPIDNTVLANEQVDSEGKSWRSGAVVEKKLLKQW------FLRITNYADELLKD 217

Query: 180 YE 181
            E
Sbjct: 218 LE 219


>gi|78187490|ref|YP_375533.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123757168|sp|Q3B2E1|SYL_PELLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78167392|gb|ABB24490.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 805

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 47/242 (19%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K  +W   DL++ G +    H +Y   W   L     +S   P  +K+F+ G IL +
Sbjct: 514 DAEKEHYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLKVVSTKEPF-QKLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS GNVI    V+E+ G DA+R +         + F       K  N +   G+
Sbjct: 573 DGEKMSKSRGNVIPADHVLEKYGADAVRLY---------EMFLGPLEQVKPWNTNGIEGV 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRALA 415
              ++R   ++  D +G    P A  +       +L    + ++++RE+ +    + A+A
Sbjct: 624 SRFLNRVWRLVHPDTEG----PAAVLDEAAMPGELLRRMHKTVKKVREDTECLKFNTAIA 679

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++  V+++ R  +  +                    E I  L +LL  + P ++ ++++
Sbjct: 680 EMMVFVNDLHRTGNRNR--------------------EAIETLVLLLAPYAPHISEELWE 719

Query: 476 IL 477
            L
Sbjct: 720 AL 721



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +E+ K Y+     YP+    H+GH      +D++AR+ R  G +VL   G D  G    +
Sbjct: 28  QEKPKYYVLDMFPYPSGSGLHVGHLEGYTASDIVARYRRSRGNNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N R+FR+    +  SYD    I TT+  +    + ++ K+ + G 
Sbjct: 88  YAIKTGTHPSLTTENNIRSFRETLQAMGFSYDWSREINTTDPGYFRWTQWIFLKLYEMGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYQ 150


>gi|15646154|ref|NP_208338.1| leucyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024678|sp|P56457|SYL_HELPY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2314727|gb|AAD08585.1| leucyl-tRNA synthetase (leuS) [Helicobacter pylori 26695]
          Length = 806

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPDYTKFEQRFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKNGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAINP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|307718100|ref|YP_003873632.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531825|gb|ADN01359.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 809

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 15/187 (8%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + + ++ Y+     YP+A+  H+GH       D+  R+ R+ G  VL   G D  G    
Sbjct: 31  IPKEKRRYVLDMFPYPSAEGLHVGHPEGYTATDIYCRYLRMRGYQVLHPMGFDSFGLPAE 90

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
             A   G   ++  ++N   FR     L  SY  D  I T    ++   + ++ K+ + G
Sbjct: 91  IYAITTGTHPRITTERNIERFRTQIQSLGFSYDWDREIATHRPEYYKWTQWMFLKMYEMG 150

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV------QWMEEEGYFFRLSA 171
             Y      W+         ++EV +  +G      ++PV      QWM       +++A
Sbjct: 151 LAYMAEVPVWFCEALGTVLANEEVIQTPEGPRSERGNHPVIRKPLRQWM------LKITA 204

Query: 172 YQDKLLS 178
           Y D+LL 
Sbjct: 205 YADRLLE 211



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 30/185 (16%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-G 300
            K  +W P DL+V G +    H +Y   W   L    L     P   ++ + G IL + G
Sbjct: 528 EKIDYWMPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVNTDEPF-MRLVNQGMILGEDG 586

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD-LANGIG 359
           EK+SKS GNV++P ++IEE G D+LR +   E+  G          K  V      N + 
Sbjct: 587 EKMSKSRGNVVNPDDIIEEYGADSLRMY---EMFMGPLEATKPWSTKGLVGVHRFLNRVW 643

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           ++  R ++                 E D  +L +  + ++++ E+ ++   + A+AQ+++
Sbjct: 644 DISEREITD---------------EEPDPDLLKLLHKTIKKVTEDTEHLRFNTAIAQMMT 688

Query: 420 LVSEV 424
            ++E+
Sbjct: 689 YINEI 693


>gi|284931233|gb|ADC31171.1| valyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 860

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 31/250 (12%)

Query: 257 PADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           P  L V   DI+ F  +   + ++LL  ++P    +  HG IL +   K+SKSL N +DP
Sbjct: 480 PNSLLVTAYDIVFFWVLRMIFMSWLLKKSIPF-HDLLLHGLILDEHNRKMSKSLNNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           I++I++ G DALR FL    + G+D  Y+ +  K    A   N + NL +R + +I    
Sbjct: 539 IQIIDQYGADALRLFLTSNTSPGEDVSYNVE--KINAAASFLNKLWNL-ARYLKLI---- 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
           D    T       D  I+   + V   I++ ++      +  Q+   + +   + Y +  
Sbjct: 592 DQSKLTDQPLDSLDHWIIHRFNEVNAGIQDKLKEYRFALSNKQLSDFIWDDFANVYIELN 651

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           K  +  K   + A+       ++ R+  I+L   VP +  +I++    +D          
Sbjct: 652 KKAQWSKAKFELAN-------DIFRKFLIMLHPSVPFITEQIYNTFEFSDS--------- 695

Query: 492 RLKPGFMLHK 501
             KP  +L K
Sbjct: 696 --KPSIILEK 703


>gi|254556997|ref|YP_003063414.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254045924|gb|ACT62717.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 932

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YLD         +PADL++ G D  R  F++    +  +S
Sbjct: 526 IMDVWFDSGSSHQGVLAERSYLD---------YPADLYLEGSDQYRGWFNSSLITSVAVS 576

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K+V S GF L ++G K+SKSLGN I P +VI+++G + +R ++ 
Sbjct: 577 GHAPY-KQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVA 625



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 28/66 (42%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R+  ++G    +  G D HG  I +  + AG   K   D
Sbjct: 58  YANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYDRKKMTD 117

Query: 75  QNSRNF 80
              R  
Sbjct: 118 NEFREL 123


>gi|240015827|ref|ZP_04722367.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 929

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIGDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|257386747|ref|YP_003176520.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169054|gb|ACV46813.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 930

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 41/272 (15%)

Query: 227 IMYVWIDALTNYL--TTTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA 282
            M  ++D+   +L  T+    D P D ++A  W P D +V G +    H +Y   F+  A
Sbjct: 517 TMDTFVDSSWYFLRYTSPDREDAPFDTARANDWLPVDQYVGGIEHAVMHLLY-ARFVTKA 575

Query: 283 NLPLP--------KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              L         + + + G +   GEK+SKS GNV+ P  ++EE G D  R F+++   
Sbjct: 576 ISDLELLDHREPFQNLVTQGMVQLDGEKMSKSKGNVVSPQNIVEEYGADTARLFMMQAAR 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILS 392
             +D  +  +G++                R ++ +    +  + +P A    D  + +  
Sbjct: 636 PERDFDWKDEGVESS-------------HRFLTRLYDAVEAHVGSPPAGEAGDVTDYVRH 682

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              RV     E+ +      AL +   L+S +DRY +A +P          A TV     
Sbjct: 683 EIDRVTAIADESYEQLTFTEALRETRELLSLLDRYAEATEP---------HAETVEAALS 733

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            ++R    LL    P +  +++  L  AD+ R
Sbjct: 734 TIVR----LLAPVAPHVTEELWSELGRADDQR 761



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 16/178 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  +R+ R+ G DVL   G D  G     AA+    
Sbjct: 38  YVLAMFPYTSGNLHMGHVRNYTITDAYSRYRRMQGEDVLHPMGWDSFGLPAENAAEERDT 97

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI-YKGCY 124
           + + +  +   + +     +   Y  D  + T +  ++   + L+K+  ++G +  KG  
Sbjct: 98  SPEEWTRKCIESMKAQMSEMGFGYDWDREVTTCDPEYYRWNQWLFKRFHEEGLVERKGSE 157

Query: 125 SGWYS-----LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             W       L DE    + E+    D         PV   + + +F  ++ Y D+L+
Sbjct: 158 VNWCPSCETVLADEQVEGEAELCWRCD--------TPVTQRDLDQWFLTITDYADELV 207


>gi|292669612|ref|ZP_06603038.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648821|gb|EFF66793.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 823

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 16/182 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV+ARF  ++G +VL   G D  G      A+
Sbjct: 31  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVIARFRTMEGYNVLHPMGFDSFGM----PAE 86

Query: 64  NAGVTTKVFVDQ----NSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
           NA +  KV   Q    N  N       L ++Y  D  + T  + ++   +  ++    KG
Sbjct: 87  NAAIQNKVHPAQWTYANIENMERQQRALGLAYDWDREVITCREDYYRWTQWFFELFYKKG 146

Query: 118 DIYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
             YK   S  W         N+    +  DG+ +  + + VQ      +FF+++ Y D+L
Sbjct: 147 LAYKKAASVNWCETCGTVLANE----QVEDGKCWRCK-SEVQKKNLAQWFFKITDYADEL 201

Query: 177 LS 178
           L+
Sbjct: 202 LA 203



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 45/250 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  K  +W P D ++ G +    H +Y   F        +L  + P    + + G ++  
Sbjct: 521 DRDKVNYWAPVDQYIGGIEHAILHLLYARFFTKVLRDAGMLDFDEPF-TNLLTQGMVIKD 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+ P E+IE  G D  R F++      +D  +   G++         G  
Sbjct: 580 GAKMSKSLGNVVSPEEIIEHYGADTARLFILFAAPVDRDLDWSDQGVE---------GAF 630

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSV----CSRVL----QEIRENMQNQ-LI 410
             ++R V  IL  ++ +I   GA    D S LS       RVL    +++ E+++++ + 
Sbjct: 631 RFLNR-VWRILLQFEKVI--KGASDVYDVSSLSAEEVDLRRVLHITIRKVTEDVRDRFMF 687

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A++ V+ LV       +A   ++ K+ +P  A        E  R L  +L  F P + 
Sbjct: 688 NTAISSVMELV-------NAFYAFQEKELSPALAR-------ETARALLRMLAPFAPHIT 733

Query: 471 NKIFDILFVA 480
            ++++ LF  
Sbjct: 734 EELWERLFTG 743


>gi|256419444|ref|YP_003120097.1| isoleucyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034352|gb|ACU57896.1| isoleucyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 1183

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 4/99 (4%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           AK +PAD    G D  R  F+ ++    +L  N+   K V S+G +L K G K+SKS+GN
Sbjct: 679 AKSFPADFIAEGVDQTRGWFYTLHALGTMLFDNVAY-KTVVSNGLVLDKNGNKMSKSVGN 737

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           V+DP   +E+ G DA R++L+   +      +D +G+++
Sbjct: 738 VVDPFATLEQYGADATRWYLITNASPWDSMKFDVEGIRE 776


>gi|282882605|ref|ZP_06291224.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297580|gb|EFA90057.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 1033

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 22/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D     F PAD    G D  R  F+++   +  ++  
Sbjct: 514 VIDVWFDSGSMPFAQWHYPFENKDNFDELF-PADFICEGIDQTRGWFYSLLAISTYMTGK 572

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  +  IL K G+K+SKS GN + P E+ ++ G D +R++L+          +D
Sbjct: 573 SPY-KNVLVNDLILDKEGKKMSKSRGNTVAPFELFDKYGADVVRWYLLYVSPPWNPTKFD 631

Query: 343 KDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFT-------ESDESILSVC 394
           +DGL++ + +     + N+ +  S+     D D     P  F        E D+ +LS  
Sbjct: 632 EDGLRE-MESKFFRSLRNIYNFFSLYANTDDID-----PRTFQVKYEDRDEIDKWLLSKY 685

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           +R+++ +R++M    + + + ++   V  E+  ++  +      KT+ D +   +Y  T 
Sbjct: 686 NRLVKVVRDDMDKFELTKVVREISDFVIEELSNWYIRRNRRRFWKTDKDDSKFAVYSTTY 745

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
           EV+  ++ L+   VP ++ ++F
Sbjct: 746 EVLLGISKLIAPIVPFISEELF 767


>gi|298291906|ref|YP_003693845.1| valyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928417|gb|ADH89226.1| valyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 945

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 12/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K +++P  + + G DI+ F    W A ++   L  
Sbjct: 511 VLDTWFSSALWPFSTLGWPDETPELK-RYYPTSVLITGFDIIFF----WVARMMMMGLHF 565

Query: 285 ---PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +P K V+ H  +   KG K+SKS GNVIDP++++E+ G DALR+ L    A G+D
Sbjct: 566 MDDVVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADALRFTLAAMAAQGRD 624



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + D+L RF R+ G DVL+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHALNNTLQDILCRFERMRGKDVLWQVGTD-----------HAGIATQMVVERQ 96


>gi|300768835|ref|ZP_07078729.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493568|gb|EFK28742.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 932

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YLD         +PADL++ G D  R  F++    +  +S
Sbjct: 526 IMDVWFDSGSSHQGVLAERSYLD---------YPADLYLEGSDQYRGWFNSSLITSVAVS 576

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K+V S GF L ++G K+SKSLGN I P +VI+++G + +R ++ 
Sbjct: 577 GHAPY-KQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVA 625



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 28/66 (42%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R+  ++G    +  G D HG  I +  + AG   K   D
Sbjct: 58  YANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYDRKKMTD 117

Query: 75  QNSRNF 80
              R  
Sbjct: 118 NEFREL 123


>gi|15677669|ref|NP_274830.1| isoleucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81784233|sp|Q9JXY7|SYI_NEIMB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7227088|gb|AAF42168.1| isoleucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139653|gb|EGC62192.1| isoleucyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200894|gb|ADY96349.1| isoleucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 929

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 115/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE            H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQECLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|269115080|ref|YP_003302843.1| Isoleucyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322705|emb|CAX37440.1| Isoleucyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 888

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL--------SLSRKTFDWGIK 219
           R  ++   ++ +Y+ +   +L  E    VI+ VK    D+         L  K  + G+K
Sbjct: 458 RQRSWGVPIIIFYDKNKNPVLDDEIFEHVINLVKEHGSDVWYEWTADELLPEKFRNLGLK 517

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
              D   IM VW D+ +  ++       P G KA   P DL++ G D  R  F++    +
Sbjct: 518 KETD---IMDVWFDSGSTSISV-----EPGGIKA---PFDLYLEGSDQYRGWFNSSLINS 566

Query: 278 FLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
                  P  K + SHGF+L  KG+K+SKS GNV+DP+ VI++ G D LR
Sbjct: 567 VAWRNTSPF-KALVSHGFVLDGKGQKMSKSKGNVVDPLAVIDKYGADILR 615



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   I+ D++ RF  + G    +  G D HG  I
Sbjct: 62  YANGNIHVGHALNKILKDIIVRFRSMQGYYSPYVPGWDTHGLPI 105


>gi|255311103|ref|ZP_05353673.1| valyl-tRNA synthetase [Chlamydia trachomatis 6276]
          Length = 939

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 104/277 (37%), Gaps = 73/277 (26%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           SL     +   EVY    G  Y +      ++ ++ +F  + +++D L  +  S    I 
Sbjct: 328 SLEALGLFVKKEVYSSRVGVSYRSGAIIEPYLSKQ-WFVSVDSFRDSLRGFVNSEEIRIF 386

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----------------------DDPQ 225
           P E     +++V + LKD  +SR+ + WG +IP                        DP+
Sbjct: 387 PPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWHNKHDENVICFDGEGGPEEVMRDPE 444

Query: 226 Y------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
                  ++  W  +    LT  G+ D       KF+P  + V G DIL F  +     +
Sbjct: 445 SWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKFYPTAVLVTGHDIL-FFWVTRMVLM 503

Query: 280 LSANLPLP--KKVFSHGFILHKG-----------------------------------EK 302
            SA +       VF HG I  K                                    EK
Sbjct: 504 CSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEK 563

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +SKS GNVIDPIE+IE  G DA+R  L    +C   G
Sbjct: 564 LSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANRG 597



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 26/178 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHA    + D L R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTVV 95

Query: 56  ---QKIAKAAQNAGVTTKVFVD------QNSRN-----FRDMADVLDISYDDFIRTTEKR 101
               K +   Q    + + F+       + S+N      R +    D S   F  T +  
Sbjct: 96  ERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +   +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V 
Sbjct: 154 ANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVN 211


>gi|227514816|ref|ZP_03944865.1| hypothetical protein HMPREF0511_0936 [Lactobacillus fermentum ATCC
           14931]
 gi|227086806|gb|EEI22118.1| hypothetical protein HMPREF0511_0936 [Lactobacillus fermentum ATCC
           14931]
          Length = 930

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PAD+++ G D  R  F++    + ++S
Sbjct: 525 IMDVWFDSGSSHQGVLAERDYLT---------YPADMYLEGSDQYRGWFNSSLITSVVVS 575

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L   G+K+SKSLGNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KSVLSQGFTLDQSGKKMSKSLGNVIDPNKVVKQMGAEIIRLWVM 624



 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      AG   K    
Sbjct: 58  YANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKAGYDRK---K 114

Query: 75  QNSRNFRDMA 84
            +   FRD+ 
Sbjct: 115 MSLTEFRDLC 124


>gi|28871927|ref|NP_794546.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|32130171|sp|Q87VX3|SYL_PSESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28855180|gb|AAO58241.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 868

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 32/184 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADL 354
           EK+SKS  N IDP  +I++ G D  R F++        +     G        +RV    
Sbjct: 626 EKMSKSKKNGIDPQTMIDQYGADTCRLFMMFASPPDMSLEWSDSGVEGSHRFLRRVWRLA 685

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRA 413
              +G   S S+ +             A T+  +++     + +++  +++ QNQ  + A
Sbjct: 686 QAHVGQGASGSLDI------------AALTDEQKAVRRSIHQAIKQASQDIGQNQKFNTA 733

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +AQV++L++ +++   A        T  DRA     +  E +  + +LL    P +++++
Sbjct: 734 VAQVMTLMNVLEKAPQA--------TPQDRA-----LLQEGLETVTLLLAPITPHISHEL 780

Query: 474 FDIL 477
           +  L
Sbjct: 781 WTQL 784


>gi|56808288|ref|ZP_00366054.1| COG0495: Leucyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 620

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 14/186 (7%)

Query: 15  YPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A + G     F 
Sbjct: 4   YPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPAEFT 63

Query: 74  DQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG-CYSGWYSL 130
            +N  NF+   + L  SY  D  + TT+  ++   + ++ ++ +KG  Y+      W   
Sbjct: 64  AENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTELYEKGLAYEAEVPVNWVEE 123

Query: 131 RDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEF 186
              A  N++ +  G    G Y   +    QWM       +++AY ++LL   E    PE 
Sbjct: 124 LGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAERLLEDLEEVDWPES 177

Query: 187 ILPIER 192
           I  ++R
Sbjct: 178 IKDMQR 183


>gi|13027666|gb|AAG15586.1| leucyl-tRNA synthetase-like protein [Pasteurella multocida]
          Length = 700

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 6/183 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   +  D  + T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIDYMKNQLKILGFGFDWDREVTTCKPDYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G   +       PV+  E   +F +++ Y ++LL   +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEGCCWRC----DTPVEQKEIPQWFIKITDYAEQLLGGLD 207

Query: 182 SHP 184
             P
Sbjct: 208 HLP 210


>gi|310766978|gb|ADP11928.1| leucyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 860

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +    + V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDMTVLANEQVI---DGCCWRCD-SKVERKEIPQWFIKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 KLESWPEQVKTMQR 221


>gi|300703051|ref|YP_003744653.1| leucyl-tRNA synthetase (leucine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
 gi|299070714|emb|CBJ42009.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
          Length = 877

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCDPDYYRWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELLS 210


>gi|149277070|ref|ZP_01883212.1| isoleucine--tRNA ligase [Pedobacter sp. BAL39]
 gi|149231947|gb|EDM37324.1| isoleucine--tRNA ligase [Pedobacter sp. BAL39]
          Length = 1131

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 14/212 (6%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V S+G +L K G K+SK LGN +DP   IE    DA R++++   +   +  ++ DGL
Sbjct: 665 KNVVSNGLVLDKNGNKMSKRLGNGVDPFSTIETYSADATRWYMISNASPWDNLKFNMDGL 724

Query: 347 ---KKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              +++    L N      +  ++     D + + P     +E D  ILS+   ++ E+ 
Sbjct: 725 DEVRRKFFGTLYNTYAFFALYANIDKFEIDVNNLTPV-AERSELDRWILSLLQALITEVD 783

Query: 403 ENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRAS-TVLYVTVEVIRQ 457
           E+       +A   + + V E +  ++     ++ W+ + T   +A+   LY  +  I Q
Sbjct: 784 ESYNAYEPTKASRAIQNFVDEHLSNWYIRLSRRRFWKGEMTADKKAAYETLYTCLNTIAQ 843

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              L+    P  A+ ++  L VAD+N   QS+
Sbjct: 844 ---LMSPVAPFFADWLYQNLAVADKNNDVQSI 872


>gi|325204849|gb|ADZ00303.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 876

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|313669111|ref|YP_004049395.1| leucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006573|emb|CBN88037.1| putative leucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 876

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|83746765|ref|ZP_00943813.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207744312|ref|YP_002260704.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83726534|gb|EAP73664.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206595717|emb|CAQ62644.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 877

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCDPDYYRWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELLS 210


>gi|309379503|emb|CBX21869.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 876

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|306820218|ref|ZP_07453861.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551764|gb|EFM39712.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 1036

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 21/243 (8%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
            +N +  K  F PAD    G D  R  F+++   A  +    P  K V  +  IL K G+
Sbjct: 534 FENKEVFKQNF-PADFICEGIDQTRGWFYSLIAIATYVDGVSPY-KNVLVNDLILDKNGK 591

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN- 360
           K+SKS GN +DP E+ E+ G DALR++L+          +D DGLK+ V +   + I N 
Sbjct: 592 KMSKSKGNTVDPFELFEQYGADALRWYLLYVSPAWSPTKFDIDGLKE-VQSKFFSTIKNI 650

Query: 361 -----LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                L + +  + +K  D  +P     +E D  +LS  + ++  + + +    + +A+ 
Sbjct: 651 YNFFVLYANTDDIDIKSID--VPYEQR-SELDRWLLSKYNNLVDYVVKQLDVYDMTKAVR 707

Query: 416 QVISLVSEVDRYF----DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           ++   V+EV   +      ++ W  + T  D+ S  L  T EV++ +  L+  F P L++
Sbjct: 708 EIQEFVNEVFSNWYIRRSRRRFWGTEMT-LDKKSVYL-TTFEVLKGITQLVAPFAPFLSD 765

Query: 472 KIF 474
           +++
Sbjct: 766 EMY 768


>gi|239833544|ref|ZP_04681872.1| isoleucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239821607|gb|EEQ93176.1| isoleucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 980

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 25/174 (14%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           ++EEG   +  A   ++L  +E+               ++   G ++  L  +  +   +
Sbjct: 527 VDEEGNILQDDAVNKRILEAFEAE-----------GADAWFAEGARERFLGSRANEGWTQ 575

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
           + D    I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +
Sbjct: 576 VRD----ILDVWFDSGSTHTFT--LEDRPDMK----WPADVYLEGSDQHRGWFHSSLLES 625

Query: 278 FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                  P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 626 CGTRGRAPY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 678



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 61  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 120

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDM-ADVLDISYDDFIRT----------TEKRHHDT 105
           I +  +  G    +V +++  R  RD  A  + +  ++F R           T    H  
Sbjct: 121 IEEKYRAEGKNKDEVPINEFRRECRDFAAGWIKVQTEEFKRLAILGDFENPYTTMNFHAE 180

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 181 SRIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 218


>gi|299783032|gb|ADJ41030.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
           5716]
          Length = 930

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PAD+++ G D  R  F++    + ++S
Sbjct: 525 IMDVWFDSGSSHQGVLAERDYLT---------YPADMYLEGSDQYRGWFNSSLITSVVVS 575

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L   G+K+SKSLGNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KSVLSQGFTLDQSGKKMSKSLGNVIDPNKVVKQMGAEIIRLWVM 624



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      AG   K    
Sbjct: 58  YANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKAGYDRK---K 114

Query: 75  QNSRNFRDMA 84
            +   FRD+ 
Sbjct: 115 MSLTEFRDLC 124


>gi|260663602|ref|ZP_05864491.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260551828|gb|EEX24943.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 930

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PAD+++ G D  R  F++    + ++S
Sbjct: 525 IMDVWFDSGSSHQGVLAERDYLT---------YPADMYLEGSDQYRGWFNSSLITSVVVS 575

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L   G+K+SKSLGNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KSVLSQGFTLDQSGKKMSKSLGNVIDPNKVVKQMGAEIIRLWVM 624



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      AG   K    
Sbjct: 58  YANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKAGYDRK---K 114

Query: 75  QNSRNFRDMA 84
            +   FRD+ 
Sbjct: 115 MSLTEFRDLC 124


>gi|229815148|ref|ZP_04445485.1| hypothetical protein COLINT_02194 [Collinsella intestinalis DSM
           13280]
 gi|229809378|gb|EEP45143.1| hypothetical protein COLINT_02194 [Collinsella intestinalis DSM
           13280]
          Length = 905

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 56/280 (20%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------- 221
           L A QD  +++   HP       R  E  +     LKD  +SR+ + WG +IP       
Sbjct: 376 LKAVQDGRVTF---HPA------RWTETYTTWMENLKDWCISRQLW-WGHRIPVFYCEEC 425

Query: 222 -------DD--------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                  DD               + ++  W  +      T G+  +P+  +    P   
Sbjct: 426 GWEDACMDDVTVCPKCGCTHVHQDENVLDTWFSSQLWTFATQGWPQHPEQLEGHH-PTTA 484

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNVIDPI 314
            V  +DI+      W A ++ ++L    +V  H  +++       G ++SKS GN ++P+
Sbjct: 485 LVTARDIIAL----WVARMVMSSLYFLDEVPFHDVVIYPTILAKDGSRMSKSKGNGVNPM 540

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSM 368
           ++I+  G DA+RY L+      +D  +D D       LK     + A      +  +   
Sbjct: 541 DLIDMYGADAMRYNLLTLCTTNQDVKFDADIDKKTKALKGSARTEQARSFVTKIWNASRF 600

Query: 369 ILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + DG  P  P A T +D  + S  ++  + + E ++ 
Sbjct: 601 LLMNMDGYTPGEPVAETAADAWMFSRLAKATRMVTEGIEK 640


>gi|240851273|ref|YP_002972676.1| leucyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240268396|gb|ACS51984.1| leucyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 886

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAL 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + V  K +  QN    R     L +S D   +F  T +  ++   ++L+     KG + 
Sbjct: 99  QSKVHPKTWTYQNIAVMRGQLKQLGLSLDWTREFA-TCDVEYYHRQQMLFLDFYQKGLVA 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    DG+ + +    V+  E   +FF++S + + LL+  
Sbjct: 158 RKVAKVNWDPVDHTVLANEQV---VDGRGWRS-GALVEQRELTQWFFKISDFSEDLLAGL 213

Query: 181 E 181
           E
Sbjct: 214 E 214



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 13/120 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++       A+    
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTVRWFVLSDSPPDRDVIWTESGVEG------AHRFVQ 696

Query: 361 LVSRSVSM---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            V R V++   +LKD        GA  E  ++      R L  + ++++    +RA+A++
Sbjct: 697 RVWRCVALSASVLKDVAPCAGHQGAALELSKA----AHRTLCAVEDDLEKFAFNRAIARL 752


>gi|184155058|ref|YP_001843398.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|254782414|sp|B2GB86|SYI_LACF3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|183226402|dbj|BAG26918.1| isoleucyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 930

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PAD+++ G D  R  F++    + ++S
Sbjct: 525 IMDVWFDSGSSHQGVLAERDYLT---------YPADMYLEGSDQYRGWFNSSLITSVVVS 575

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L   G+K+SKSLGNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KSVLSQGFTLDQSGKKMSKSLGNVIDPNKVVKQMGAEIIRLWVM 624



 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      AG   K    
Sbjct: 58  YANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKAGYDRK---K 114

Query: 75  QNSRNFRDMA 84
            +   FRD+ 
Sbjct: 115 MSLTEFRDLC 124


>gi|33596363|ref|NP_884006.1| leucyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|48428536|sp|Q7W9M4|SYL_BORPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33566132|emb|CAE37032.1| leucyl-tRNA synthetase [Bordetella parapertussis]
          Length = 885

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   + +++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPKYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y+      +   D+    +++V    DG+ + +   PV+  E  GY+ R++ Y ++LL
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRS-GAPVEKREIPGYYLRITDYAEELL 209


>gi|11499997|ref|NP_071243.1| leucyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122899|sp|O30250|SYL_ARCFU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2650668|gb|AAB91241.1| leucyl-tRNA synthetase (leuS) [Archaeoglobus fulgidus DSM 4304]
          Length = 932

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 17/178 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P DL   GKD++  H +++  F   A  P    P+ +  +G++  +G+K+SKS G ++
Sbjct: 581 WYPVDLRSSGKDLVANHLLFY-LFHHVAIFPPDKWPRAIAVNGYVSLEGKKMSKSKGPLL 639

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
                +++ G D  R +++          YD D   K    +   G+ N + R  +++ +
Sbjct: 640 TMKRAVQQYGADVTRLYILHAAE------YDSDADWKSREVE---GLANHLRRFYNLVKE 690

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL-AQVISLVSEVDRYF 428
           +Y   +   G  T  D  ++S   R ++E+RE M N    RA+ A    L+++V  Y 
Sbjct: 691 NY---LKEVGELTTLDRWLVSRMQRAIKEVREAMDNLQTRRAVNAAFFELMNDVRWYL 745



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK +++    Y N   H GH     I D  AR+ R+ G +VLF  G    G  I   A
Sbjct: 27  EKEKFFLTIPYPYLNGNLHAGHTRTFTIGDAFARYMRMKGYNVLFPLGFHVTGTPIIGLA 86

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
           +       +   ++ R         D+  +D ++ T
Sbjct: 87  E-------LIAKRDERTIEVYTKYHDVPLEDLLQLT 115


>gi|330811915|ref|YP_004356377.1| Leucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380023|gb|AEA71373.1| Leucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 868

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 16/181 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N        R +   +D S +  + T +  ++   + L+ ++ +KG I
Sbjct: 92  KNNVAPAKWTYENIAYMKTQLRSLGLAVDWSRE--VTTCKPDYYRWEQWLFTRLFEKGVI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+L
Sbjct: 150 YRKNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADEL 202

Query: 177 L 177
           L
Sbjct: 203 L 203


>gi|325127472|gb|EGC50401.1| leucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 876

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|313618588|gb|EFR90560.1| leucyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 803

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 13/198 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++     +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKXXXWIFEKLYEKGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y+   +  W         N++ +   ++   +     P+ QWM       +++AY D+L
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGFPVFRKPMRQWM------LKITAYADRL 201

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 202 LDDLELVDWPENIKDMQR 219



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 19/150 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K   W P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 513 DKEKLAGWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGEN 572

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   
Sbjct: 573 NEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRL 632

Query: 354 LANGIGNLVSRSVS----MILKDYDGMIPT 379
           L    G L  +  +     + K Y  M+ T
Sbjct: 633 LVTEEGTLAEKVTTDANANLEKAYHHMVKT 662


>gi|207721577|ref|YP_002252016.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum MolK2]
 gi|206586738|emb|CAQ17323.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum MolK2]
          Length = 877

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCDPDYYRWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELLS 210


>gi|188534474|ref|YP_001908271.1| leucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689681|sp|B2VBM4|SYL_ERWT9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|188029516|emb|CAO97393.1| Leucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 860

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDMTVLANEQVI---DGCCWRCDSK-VERKEIPQWFVKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 KLESWPEQVKTMQR 221


>gi|114777967|ref|ZP_01452881.1| Valyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
 gi|114551754|gb|EAU54306.1| Valyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
          Length = 882

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 26/267 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D       +F+P ++ V G DI+ F    W A ++   +  
Sbjct: 453 VLDTWFSSGLWPFSTLGWPDKTP-EMDQFYPTNVLVTGFDIIFF----WVARMIMMGMKF 507

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +V      +H      +G+K+SKS GNVIDP+E+  + G DALR+ L      G+D  
Sbjct: 508 TGQVPFRDIYIHALIRDAEGQKMSKSKGNVIDPLEMTGKYGADALRFTLAHMATPGRDVK 567

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVL 398
            D+  ++   N +  N I N  +R V M   D    +P      + D +  IL+      
Sbjct: 568 LDETRIES--NRNFMNKIWN-AARFVFMNRAD---AVPDASLRPQLDANRWILAELDTTA 621

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVEV 454
            E+ + ++    + A   + S +  +  D Y +A K   W   +T      T +   +E 
Sbjct: 622 AEVHKALEEYRFNEAAGALYSFIWGTYCDWYVEAAKVALWSDDETMISETRTAMLTALEG 681

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
             +   LL    P +   ++  L  AD
Sbjct: 682 WLK---LLHPICPYITETLWQELHGAD 705


>gi|110833353|ref|YP_692212.1| valyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|122959655|sp|Q0VSA8|SYV_ALCBS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|110646464|emb|CAL15940.1| valyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 931

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 15/138 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D+ D  +  F P D+ V G DI+ F    W A ++   L  
Sbjct: 447 VLDTWFSSALWTFSTLGWPDDTDALRT-FHPTDVLVTGFDIIFF----WVARMIMMTLKF 501

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 KKV+ HG +  + G+K+SKS GNV+DP+++I+ + +DA    L+ +   G    
Sbjct: 502 TDQVPFKKVYVHGLVRDNDGQKMSKSKGNVLDPLDMIDGITLDA----LIDKRTKGLMQP 557

Query: 341 YDKDGLKKRVNADLANGI 358
             +  + KR N D  +GI
Sbjct: 558 QKEKQITKRTNKDFPDGI 575



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNA-GVTTKV 71
           H+GHA++  I D L R+ R+ G + L+  GTD  G        +K+A    N   +  + 
Sbjct: 49  HMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTDHAGIATQMVVERKLAGEGTNRHELGREK 108

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+            +R  R M   +D + + F  T +    +  R ++ ++  +G IY
Sbjct: 109 FLDKVWEWKRESGGTITRQLRRMGASVDWTRERF--TMDDGLSNAVREVFVRLHKEGLIY 166

Query: 121 KG 122
           +G
Sbjct: 167 RG 168


>gi|308186026|ref|YP_003930157.1| Leucyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056536|gb|ADO08708.1| Leucyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 860

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEEWPEQVKTMQR 221


>gi|218671833|ref|ZP_03521502.1| valyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 341

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 23/262 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 38  VLDTWFSSALWPFSTLGWPEQTP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 92

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 93  MKDDNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 152

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D   D   +    N      + N  +R   M     D       A    +  IL+  
Sbjct: 153 QGRDVKLDPARIAGYRN--FGTKLWN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTEL 209

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV-SEV-DRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +R  +++ E ++    + A   +   V +EV D Y +  KP      +    +     + 
Sbjct: 210 ARTERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDAGAKAEAQACSA 268

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++ ++  LL  F+P +  +++
Sbjct: 269 YILEEIYKLLHPFMPFMTEELW 290


>gi|33593067|ref|NP_880711.1| leucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|48428535|sp|Q7VWY7|SYL_BORPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33563442|emb|CAE42323.1| leucyl-tRNA synthetase [Bordetella pertussis Tohama I]
          Length = 885

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   + +++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPKYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y+      +   D+    +++V    DG+ + +   PV+  E  GY+ R++ Y ++LL
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRS-GAPVEKREIPGYYLRITDYAEELL 209


>gi|297180539|gb|ADI16751.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_11B23]
          Length = 658

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 8/176 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I D ++R+ +L G +VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMLPYPSGNLHMGHVRNYSIGDAVSRYKKLKGFNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
           +  V  + + +QN  + ++  + L  +YD    I T+++ ++   + L+ K  +KG  Y 
Sbjct: 92  DKKVHPQEWTEQNINHMKEQLNSLGFAYDWTKEINTSDESYYKFEQELFLKFYEKGLAYR 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           K     W  + D     +++V  G  G    A+   V+  E E +F +++ Y D+L
Sbjct: 152 KKSLVNWDPV-DMTVLANEQVIDGK-GWRTGAE---VELKEIETWFLKITDYADEL 202



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 10/87 (11%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
            ++W P DL++ G +    H +Y   F        ++  + P  KK+ + G +L  G K+
Sbjct: 500 TEYWLPVDLYIGGVEHAILHLLYSRFFYKVLRDMGMVKNDEPF-KKLLTQGMVLKDGAKM 558

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330
           SKS GN +DP E IE  G D++R F++
Sbjct: 559 SKSKGNTVDPKEYIENYGADSIRTFMI 585


>gi|291616683|ref|YP_003519425.1| LeuS [Pantoea ananatis LMG 20103]
 gi|291151713|gb|ADD76297.1| LeuS [Pantoea ananatis LMG 20103]
          Length = 860

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEEWPEQVKTMQR 221


>gi|124023208|ref|YP_001017515.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166231629|sp|A2C9U0|SYL_PROM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123963494|gb|ABM78250.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 878

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++ Y  +   YP+ + H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 46  QKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAI 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              V    + DQN    R   D L +S  D+ R     H D  R  W +      ++   
Sbjct: 106 ARNVDPGDWTDQNIAQMRAQLDRLGLSI-DWDRQQATCHQDYYR--WTQW-----LFLEL 157

Query: 124 YSGWYSLRDEAYYNDDEVYKG------ADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL 176
           ++G  + + EA  N D + K        DG+  + +    V+  + + +F R++ Y D L
Sbjct: 158 FAGGLAYQKEATVNWDPIDKTVLANEQVDGEGRSWRSGALVEQRQLKQWFLRITDYADAL 217

Query: 177 L 177
           +
Sbjct: 218 I 218


>gi|321469961|gb|EFX80939.1| hypothetical protein DAPPUDRAFT_318167 [Daphnia pulex]
          Length = 481

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  + K YI +   YP+ + H+GH     I+D LARF+R+ G +V+   G D  G     
Sbjct: 55  LPSQNKCYILSMFPYPSGKLHMGHVRVYTISDSLARFYRMQGKEVIHPMGWDAFGLPAEN 114

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA +  +++  +   N    ++    L IS+D    I T    ++   + ++ K+ +KG 
Sbjct: 115 AAISQNLSSNEWTKSNIEYMKNQLIKLGISFDWQREIATCSPEYYRWTQFIFLKLYEKGF 174

Query: 119 IYK 121
           +Y+
Sbjct: 175 LYQ 177


>gi|227431971|ref|ZP_03913991.1| isoleucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352256|gb|EEJ42462.1| isoleucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 930

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 28/207 (13%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L T   LD         +PAD+++ G D  R  F++    +  ++
Sbjct: 526 IMDVWFDSGSSWNGVLNTRPQLD---------YPADMYLEGSDQYRGWFNSSLITSVAVN 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K + S GF L  KG K+SKSLGN I PIEV  ++GV+ LR + +  +   +D  
Sbjct: 577 GVAPY-KAILSQGFTLDGKGNKMSKSLGNTISPIEVANKLGVEILRLWTI-SVDTSQDMP 634

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-----ILSVCS 395
              + LK+ V+ +        +  ++  ++ +     PT  A   SD S       ++ +
Sbjct: 635 VSNEILKQ-VSENYRK-----LRNTLRFLMANTADFEPTKDAIAYSDLSAHDQYFYALEN 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS 422
             + +IR+N  N  ++    +VI+ V+
Sbjct: 689 EFVADIRKNYDNYQLNDIFKRVINFVN 715



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D++ R+  + G       G D HG  I +     G   K    
Sbjct: 58  YANGNIHIGHALNKITKDIIVRYKNMAGFYAPCVPGWDTHGLPIEQQLTKLGHDRKSMPK 117

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR 96
              RN  +D A   +D    DF R
Sbjct: 118 HEWRNLAKDFALKQVDTQRADFKR 141


>gi|238590192|ref|XP_002392241.1| hypothetical protein MPER_08213 [Moniliophthora perniciosa FA553]
 gi|215458023|gb|EEB93171.1| hypothetical protein MPER_08213 [Moniliophthora perniciosa FA553]
          Length = 145

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 2/113 (1%)

Query: 2   KERE-KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           KE E  + I++A+ Y N  PH+G+    ++ ADV +R+ R   ++ L+  GTDE+G    
Sbjct: 26  KEGEPNILITSALPYCNNVPHLGNIIGSVLSADVFSRYCRTRNINTLYICGTDEYGTATE 85

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
                 G+T K   D+     ++  +  +I +D F RT+  +H + C+ ++++
Sbjct: 86  THVLIDGMTPKELCDKYHFLHKETYEWFNIGFDYFGRTSTPQHTEICQEIYQE 138


>gi|21493003|ref|NP_660078.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|21467416|gb|AAM55079.1| probable methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 529

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 140/377 (37%), Gaps = 71/377 (18%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   +  +A   PN + H+GH   + ++ADV  R+HR+ G      TG DEHG      A
Sbjct: 5   QHTFFACSAPPCPNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G         +          +DI  D F+RT+ + H D    ++ ++         
Sbjct: 65  RKLGRPVDDVAHMHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLR-------- 116

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY------------------------------YNA 152
             SG+  LRD      +++Y G   ++                              +N 
Sbjct: 117 -ASGYVELRD-----GEQLYCGTCEEFAADSLAVGECPACNAPTDSNLCEDCGSALQHNL 170

Query: 153 QHNPVQWMEEEGYFFR--------LSAYQDKLLSYYESH--PEFILPIERRNEVISFVKS 202
             NP+     +    R        L  +   L    E+   PE I    +R E + +++S
Sbjct: 171 LRNPIHTTCGQSLILRPIRQVHFELEKFAPGLDHAIEASGWPESI----KRKE-LDWLRS 225

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYI----MYVWIDALTNYLTTTGYLDNPDGSKA--KFW 256
            L  L +SR  FD G+ + + P  +    +  W + L  Y T    L   +G+       
Sbjct: 226 KLMALPMSRH-FDRGVTL-NSPVEVAGQTLMTWFEGLWCYETGIERLCKQNGADLDDTMR 283

Query: 257 PADLHVI---GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            A   ++   G+D   ++ I   A L S    +P       F   +G K S S  + +  
Sbjct: 284 NASTRLVFFMGQDNRFYYTIGVTASLFSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWA 343

Query: 314 IEVIEEVGVDALRYFLV 330
            EV  ++  + LRY+L 
Sbjct: 344 DEVAADIDTNVLRYYLA 360


>gi|78779295|ref|YP_397407.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554233|sp|Q31AX4|SYL_PROM9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78712794|gb|ABB49971.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 856

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 5/175 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     AA  
Sbjct: 44  DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIE 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G++  V+  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +Y+ 
Sbjct: 104 RGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLVYQK 163

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                +   D     +++V   ++G+ + +    V+    + +F R++ Y D+LL
Sbjct: 164 ESEVNWDPIDNTVLANEQV--DSEGKSWRSGA-LVEKKLLKQWFLRITNYADELL 215


>gi|312112848|ref|YP_004010444.1| valyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311217977|gb|ADP69345.1| valyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 942

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 23/150 (15%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E++  ++ G++ + L R             + ++  W  +     +T G+ D      A+
Sbjct: 489 EIVREIREGVRPIPLWRD------------EDVLDTWFSSGLWPFSTLGWPDE-TPELAR 535

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           ++P  + V G DI+ F    W A ++   L   K+V      +H      KG K+SKS G
Sbjct: 536 YYPTSVLVTGFDIIFF----WVARMMMLGLHFKKEVPFRDVYIHALVRDEKGAKMSKSKG 591

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           NV+DP+ V++  G DALR+ +    A G+D
Sbjct: 592 NVVDPLSVMDNYGADALRFTMAAMAAQGRD 621



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 14/89 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + DVLARF+R+ G DVL+  GTD           +AG+
Sbjct: 41  SIVIPPPNVTGSLHMGHALNNTLQDVLARFYRMRGRDVLWQPGTD-----------HAGI 89

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T+  V++     ++ +   D+  ++F+R
Sbjct: 90  ATQSLVERQLAEKQEPSR-RDLGREEFLR 117


>gi|167837875|ref|ZP_02464758.1| leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 864

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAQWTYENIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK      +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGIVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|32266432|ref|NP_860464.1| valyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81665926|sp|Q7VHN2|SYV_HELHP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|32262482|gb|AAP77530.1| valyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 899

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 49/178 (27%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP-------------QYIMYVWIDALT 236
           LKD  +SR+ + WG +IP              D+P             + ++  W  +  
Sbjct: 409 LKDWCISRQLW-WGHRIPVWYCECGNKVASESDNPICPQCQSTITKQDEDVLDTWFSSGL 467

Query: 237 NYLTTTGYLDNPDGSK---------AKFWPADLHVIGKDILRFHAIYWPA-FLLSA---- 282
              +T G+ +    ++         A+F+P  L + G DIL F    W A  +LS     
Sbjct: 468 WAFSTLGWGNEDTNTQPPLYHANDLAEFYPNSLLITGFDILFF----WVARMILSGESLL 523

Query: 283 -NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +LP  K V+ H  +    G+K+SKS GN+IDP+E+I   G D LR+ L    A G+D
Sbjct: 524 DSLPF-KDVYLHALVRDENGQKMSKSKGNIIDPMEIISSYGADTLRFTLAILCAQGRD 580



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ RF R++G   L+  G D  G
Sbjct: 65 HIGHALTFTLQDIITRFKRMEGFKTLYQPGLDHAG 99


>gi|116624918|ref|YP_827074.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122252610|sp|Q01U81|SYL_SOLUE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116228080|gb|ABJ86789.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 810

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+   HIGH     I D LAR+  + G +VL   G D  G     AA 
Sbjct: 33  KPKFYVLEMLPYPSGTLHIGHIRNYSIGDALARYKWMRGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V  + +  QN    +        SY  D  + T E  ++   +  + ++ ++G  Y 
Sbjct: 93  ANKVPPRQWTLQNIAAMKKTHRRFAFSYDWDREVSTCEPEYYRWNQWFFLRMLERGLAYR 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W         N+  V    DG  +  +  PV+    + +F +++ Y D+LL   
Sbjct: 153 KRALVNWCPKCATVLANEQVV----DGCCWRHEGTPVEQRALDQWFLKITDYADQLLDEM 208

Query: 181 E----SHPEFILPIER 192
                  PE +L ++R
Sbjct: 209 ARLEGGWPERVLTMQR 224



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 106/237 (44%), Gaps = 39/237 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D +K  +W   D ++ G +    H IY   F        L+S N P  +++F+ G ++ +
Sbjct: 517 DPAKIAYWFEIDQYIGGIEHAILHLIYSRFFTKVMRDIGLISNNEPA-RRLFTQGMVIAE 575

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+    + ++ G D  R F++  +   K+  + ++G         A G  
Sbjct: 576 GAKMSKSKGNVVGADLLADKFGADTARMFVLSNVPPEKEVDWREEG---------AEGTY 626

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
             + R      ++    +P      ++D  ++    + L++I E+ + +   +  +A ++
Sbjct: 627 RFLGRVYRFTTRN----VPAQQRSGDADRKVVRKLHQTLKKITEDFETRWHFNTCIASIM 682

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            LV+ +  Y + Q             +    V  +++  LA++L  F P L+ ++++
Sbjct: 683 ELVNLL--YAEEQ-------------NISAAVMPQILESLALMLAPFAPYLSQEMWE 724


>gi|192359451|ref|YP_001980977.1| leucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692445|sp|B3PIB4|SYL_CELJU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190685616|gb|ACE83294.1| leucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 864

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 12/188 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLAMFPYPSGKLHMGHVRNYTITDVIARYQRMQGKNVLHPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N+ + R+    L   +D    + T +  ++   +  + ++ +KG +YK
Sbjct: 92  KHNTAPAKWTYSNTDHMRNQLKQLGFGFDWSRELTTCKPEYYQWEQWFFTRLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P QW      F +++ Y ++LL+
Sbjct: 152 KMSTVNWDPIDQTVLANEQVIDGRGWRSGALVERKEIP-QW------FIKITDYAEELLN 204

Query: 179 YYESHPEF 186
             +  P +
Sbjct: 205 DLDKLPNW 212


>gi|126661985|ref|ZP_01732984.1| valyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625364|gb|EAZ96053.1| valyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 875

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 31/258 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP- 287
            W  +    +   G + NP+    K++ P +  V G DIL F    W A ++ A      
Sbjct: 459 TWFSSWLWPMAVFGGVLNPENEDFKYYYPTNDLVTGPDILFF----WVARMIIAGYEYAG 514

Query: 288 KKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +K FS+ ++       +G K+SKSLGN  +P+ +IE+ G D +R  L+   + G D  +D
Sbjct: 515 EKPFSNVYLTGLVRDKQGRKMSKSLGNSPEPLGLIEKFGADGVRVGLLLSASAGNDILFD 574

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           ++   +        G  N +  +  +I       I  P +   + E   +   + L EI 
Sbjct: 575 EELCNQ------GKGFSNKIWNAFKLIKGWEVADIAQPESSKVAIEWYEAKLQQTLAEIE 628

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP------DRASTVLYVTVEVIR 456
           +N     +  AL  +  LV      +D    W L+   P      DRA+      +E++ 
Sbjct: 629 DNFDKYRLSDALMAIYKLV------WDDFCSWFLEMIKPGYQQPIDRAT--FDKAIEMLE 680

Query: 457 QLAILLQAFVPKLANKIF 474
               LL  F+P L  +I+
Sbjct: 681 ANLKLLHPFMPFLTEEIW 698


>gi|33602351|ref|NP_889911.1| leucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|48428537|sp|Q7WH33|SYL_BORBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33576790|emb|CAE33869.1| leucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 885

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   + +++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPKYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y+      +   D+    +++V    DG+ + +   PV+  E  GY+ R++ Y ++LL
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRS-GAPVEKREIPGYYLRITDYAEELL 209


>gi|328948009|ref|YP_004365346.1| Isoleucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448333|gb|AEB14049.1| Isoleucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 1060

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 19/247 (7%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVID 312
           PAD    G D  R    ++   +L++NL   P  K    +G +L   G K+SKSL N  D
Sbjct: 564 PADFISEGLDQTR--GWFYTLTVLASNLFDKPAFKNCIVNGIVLASDGRKMSKSLRNYTD 621

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRS--- 365
           P E I ++  DA+R FL+       D   Y  +G++   K +   L N     V  +   
Sbjct: 622 PNEAINKLSADAIRLFLMHSAVVKADEIRYSDEGVRDVIKSIILPLWNSYSFFVQYANID 681

Query: 366 -VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            V+    ++D  IP        D  ILSV  ++++++   + +  +  A+  ++S + ++
Sbjct: 682 GVTCTGHEFDYKIPE----NPLDRWILSVAQKMVKDVSSALDDYDLSAAIDPMLSFIDQI 737

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           + ++  +      K   D      Y  +   ++  A++   F+P L+ +++  L  +++ 
Sbjct: 738 NNWYIRRNRRRFWKAGSDADKLEAYGALYSALKTFALVAAPFIPFLSEELWQNLKTSEDK 797

Query: 484 RCFQSLD 490
                +D
Sbjct: 798 ESVHLMD 804


>gi|327393109|dbj|BAK10531.1| leucyl-tRNA synthetase LeuS [Pantoea ananatis AJ13355]
          Length = 860

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEEWPEQVKTMQR 221


>gi|295691571|ref|YP_003595264.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295433474|gb|ADG12646.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 861

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  RPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFNVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV  K +   N    R+    L IS D   +F  T +  ++   +  + ++  +G +Y
Sbjct: 92  ERGVHPKGWTYDNIAAMREQLKALGISIDWSREFA-TCDPEYYGKQQAWFLRLLKRGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   S  +   D     +++V    DG+ + +    V+  +   +F R++ Y D L+
Sbjct: 151 RKEASVNWDPVDMTVLANEQVI---DGKGWRSGAT-VEKRKLTQWFLRITDYADALI 203



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 29/178 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P ++ E  GVDA R F++ +    +D  +   G++             
Sbjct: 622 EKMSKSKKNVVAPEDIFEAYGVDAARLFVMSDSPPERDVQWTNAGVEGSW---------- 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
              R    +  ++D       A  +SDE+ L++     +++  + ++++    +  +A++
Sbjct: 672 ---RFTHRLWNEFDSQPAGDFAHDDSDEAALALRKAAHKLIGFVTDSIEGFRFNSGVARL 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++             LK    + AS  VL    E +  LA L+  F P LA + +
Sbjct: 729 YEFLN------------ALKAAPAEGASNAVLAARAEALNILARLVAPFTPHLAEEAW 774


>gi|118475143|ref|YP_891906.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166231210|sp|A0RNX3|SYL_CAMFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118414369|gb|ABK82789.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 811

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D L+R++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRLHMGHVRNYSIGDALSRYYRNRGYNVLQPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K++   N        D L  S+       T++  +    +  + ++ +KG +Y+  
Sbjct: 92  KIHPKIWTYDNIDYMTKELDALGFSFSKKRLFATSDPLYTRWEQEFFIRMYEKGLVYRKS 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +   D+    +++V    DG+ +   H  +Q  E  GY+ +++ Y ++LL
Sbjct: 152 AVVNWCENDQTVLANEQV---EDGKCWRCGHEVIQ-KEMPGYYLKITDYANELL 201



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN +DP ++I + G D  R F++
Sbjct: 567 LLTQGMVLKDGSKMSKSKGNTVDPDDIINKFGADTARLFIL 607


>gi|78188501|ref|YP_378839.1| isoleucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170700|gb|ABB27796.1| Isoleucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 1083

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 26/236 (11%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
            +PAD    G D  R  F+ ++  A LL  + P  K +  +  IL K G K+SKS GNV+
Sbjct: 577 MFPADFIAEGVDQTRGWFYTLHAIATLL-FDKPAYKNLIVNAHILDKNGHKMSKSKGNVV 635

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL---KKRVNADLANGIGNLVSRSVSM 368
           DP E++E  G DALR++L+   A  K   ++ D +   ++R    L N      S +  +
Sbjct: 636 DPFEMMERYGADALRWYLMVSSAPWKPKSFNTDEIEEEQRRFFRALVN------SYNFFV 689

Query: 369 ILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-VS 422
           +  + DG      +      +E D  +LS  + ++ E+ + M+   I  AL  +    V 
Sbjct: 690 LYANVDGFTFAEPSIAVAERSELDRWVLSCLNTLVDEVHQRMEQYDITAALRLINDFTVD 749

Query: 423 EVDRYF--DAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++  ++   ++K +      PD+  A   LY   E +  L  LL    P +A +++
Sbjct: 750 DLSNWYIRRSRKRFWKSDMGPDKIAAYQTLY---ETLMTLCKLLAPITPFIAERLY 802


>gi|304395664|ref|ZP_07377547.1| leucyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356958|gb|EFM21322.1| leucyl-tRNA synthetase [Pantoea sp. aB]
          Length = 860

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEEWPEQVKTMQR 221


>gi|292487610|ref|YP_003530482.1| leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898849|ref|YP_003538218.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198697|emb|CBJ45806.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553029|emb|CBA20074.1| Leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 860

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWHRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +    + V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDMTVLANEQVI---DGCCWRCD-SKVERKEIPQWFVKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 KLESWPEQVKTMQR 221


>gi|203287707|ref|YP_002222722.1| leucyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690588|sp|B5RR67|SYL_BORRA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|201084927|gb|ACH94501.1| leucyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 842

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 3/178 (1%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G      
Sbjct: 33  KEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPMGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F++    L  +Y  D  I+T +  ++   + ++ ++  KG  
Sbjct: 93  AIQTGKHPKKITEKNIEKFKEQIKALGFAYDWDREIKTHDVNYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y      WY         ++EV +  DG       + V+      +  +++ Y ++L+
Sbjct: 153 YTKEIPVWYCPDLGTVLANEEVIQTPDGPRSERGFHKVERKPLRQWLLKITKYAERLI 210


>gi|229582150|ref|YP_002840549.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012866|gb|ACP48627.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 842

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 5/104 (4%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLFLTKFYEDKNVFNKTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNIPF- 556

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             V  HG +L   G ++SKS GNV+ P++ ++E G DA+R  L+
Sbjct: 557 TTVLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL 600



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQG 127


>gi|54023315|ref|YP_117557.1| valyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81823205|sp|Q5Z048|SYV_NOCFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|54014823|dbj|BAD56193.1| putative valyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 893

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 99/252 (39%), Gaps = 77/252 (30%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 412 MHDWTISRQLW-WGHRIPIWYGPDGEVVCLGPGETPPEGWVQDPD-VLDTWFSSGLWPFS 469

Query: 241 TTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLL-----------------S 281
           T G+   PD +    KF+P  + V G DIL     +W A ++                  
Sbjct: 470 TMGW---PDATPELTKFYPTSVLVTGYDIL----FFWVARMMMFGMYVAEDPALTAGKDP 522

Query: 282 ANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD- 338
             + +P K +F HG I  + G+K+SKS GN IDP++ I   G DALR+ L R    G D 
Sbjct: 523 GQVQVPFKDIFLHGLIRDQHGKKMSKSRGNGIDPLDWIRSYGADALRFTLARGAQPGGDL 582

Query: 339 ------GFYDKDGLKKRVNAD---LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                     +  + K  NA    L NG                 G +P  G+ T++D  
Sbjct: 583 SVGEPHALASRSFVTKLFNATKFALLNGAAP--------------GELPDRGSLTDADRW 628

Query: 390 ILSVCSRVLQEI 401
           IL     VL E+
Sbjct: 629 ILDRLDEVLAEV 640


>gi|307943449|ref|ZP_07658793.1| leucyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307773079|gb|EFO32296.1| leucyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 895

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 16/186 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 60  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              V  + +  +N    RD    + +S D        R   TC + +   + + +++  C
Sbjct: 120 QNKVHPRDWTYENIATMRDQLKSMGLSLD------WSREFATCDVEY--YTQQQNLFLKC 171

Query: 124 YSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  R ++  N D V        +  DG+ + +    V+  E   +FF++S Y + L
Sbjct: 172 LEAGLVYRKKSKVNWDPVDMTVLANEQVIDGRGWRSGAL-VEQRELTQWFFKISDYSEDL 230

Query: 177 LSYYES 182
           L   E+
Sbjct: 231 LEAIET 236



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 22/179 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP ++I+  G D  R+F++ +    +D  + ++G++         G   
Sbjct: 654 EKMSKSKKNTIDPTDIIDTYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAWR 704

Query: 361 LVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R V  ++ D   +    TP   + +   +     + L  +  +++    +R +A+  
Sbjct: 705 FVQR-VWRLIGDISEIEQTGTPADASGAALDLRKATHKTLDAVTHDLEMLGFNRVIARSY 763

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LV+++ +  +        K N    S  L+   E  R L  ++   +P LA + +  L
Sbjct: 764 DLVNQISKVLNG-------KDNDAGRSAALH---EAARFLVQIIAPVMPHLAEECWQAL 812


>gi|317130005|ref|YP_004096287.1| leucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474953|gb|ADU31556.1| leucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 805

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 30  KENFYALDMFPYPSGSGLHVGHPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   FR     L  SY  D  + TT++ ++   + ++ K+ +KG  Y
Sbjct: 90  LDTGNHPNEFTVKNIDVFRKQIKALGFSYDWDREVNTTDESYYKWTQWIFLKLYEKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV+    + +  R++AY D+LL  
Sbjct: 150 VDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLRITAYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            E    PE +  ++R
Sbjct: 205 LEELDWPESLKDMQR 219



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 18/179 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG-EKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+++ G IL +G EK+SK
Sbjct: 520 KWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEGNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P ++I+  G D LR + +          +  +GL         +G    + R 
Sbjct: 580 SKGNVVNPDDIIKSHGADTLRLYEMFMGPLDASIAWSTNGL---------DGARRFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +I+ D +G +       E    +     + ++++ E+ +    +  ++Q++  V+E 
Sbjct: 631 WRLIVSD-NGELNHAIVDKEGSAHMTRAYHQTVKKVTEDFEGLRFNTGISQMMVFVNEA 688


>gi|195011623|ref|XP_001983237.1| GH15697 [Drosophila grimshawi]
 gi|193896719|gb|EDV95585.1| GH15697 [Drosophila grimshawi]
          Length = 871

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 25/188 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  K Y+ +   YP+   H+GH     I+D +ARFHR+ G +V    G D  G     A
Sbjct: 59  QKSNKYYVLSMFPYPSGNLHMGHVRVYSISDAVARFHRMCGKNVFQPIGWDSFGLPAENA 118

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  QN    +   + L  S+D    + T+   ++   + L+  +  +G  
Sbjct: 119 ANQRGVAPAEWTQQNIGQMKQQLERLGCSFDWSHELSTSSPEYYKWTQSLFLMLHKQGLA 178

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRL 169
           Y+          +EA  N D V K   AD Q      N   W           + +F R 
Sbjct: 179 YQ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLKQWFIRT 225

Query: 170 SAYQDKLL 177
           SAY  +LL
Sbjct: 226 SAYAKQLL 233


>gi|209549076|ref|YP_002280993.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534832|gb|ACI54767.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 947

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P  + V G DI+ F    W   ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPDQTP-ELARYYPTSVLVTGFDIIPF----WVVRMMQMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            ++ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDENGDPVEPFHTIYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDIMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|325143835|gb|EGC66151.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 968

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 573 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 626

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 627 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 685

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 686 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 734

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 735 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 790

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 791 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 827



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 85  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 141


>gi|229493187|ref|ZP_04386979.1| valyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229319918|gb|EEN85747.1| valyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 894

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 27/149 (18%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ DN      KF+P  + V G DIL     +W A ++  
Sbjct: 454 DPD-VLDTWFSSGLWPFSTMGWPDNTP-ELEKFYPTSVLVTGYDIL----FFWVARMMMF 507

Query: 281 -----------------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGV 322
                             A +P  K VF HG +  + G+K+SKS GN IDP++ ++  G 
Sbjct: 508 GTYVSEDESITAGPGKSGAQMPF-KDVFLHGLVRDQYGKKMSKSRGNGIDPLDWVDRFGA 566

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVN 351
           DALR+ L R    G D    +D  +   N
Sbjct: 567 DALRFTLARGANPGSDLSVGEDSAQSSRN 595



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + DVL+R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 65  HMGHALDHTLMDVLSRRKRMQGYEVLWLPGMDHAGIATQSVVEKQLAADGKTKEDFGREL 124

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T ++      + ++K++ D+G IY
Sbjct: 125 FIDKVWDWKRESGGTIGGQMRRIGDGVDWSRDRF--TMDEGLSRAVQTVFKRMFDEGLIY 182

Query: 121 KG 122
           + 
Sbjct: 183 RA 184


>gi|153010355|ref|YP_001371569.1| isoleucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151562243|gb|ABS15740.1| isoleucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 970

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 569 ILDVWFDSGSTHTFT--LEDRPDMK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 623 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 668



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  +  G    +V +++  R  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAEGKNKDEVPINEFRRECREFATNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 SRIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|126696308|ref|YP_001091194.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166231628|sp|A3PCW8|SYL_PROM0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126543351|gb|ABO17593.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 856

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     AA  
Sbjct: 44  DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIE 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G++  V+  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +Y+ 
Sbjct: 104 RGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYVWTQYLFLELYKAGLVYQK 163

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                +   D     +++V   ++G+ + +    V+    + +F R++ Y D+LL   E
Sbjct: 164 ESEVNWDPIDNTVLANEQV--DSEGKSWRSGA-IVEKKLLKQWFLRITNYADELLKDLE 219



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 81/178 (45%), Gaps = 26/178 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359
           EK+SKS  N IDP  VI++ G D  R F++ +    KD  + D D            G  
Sbjct: 621 EKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDTD----------VEGQF 670

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +SR   + +     +     ++ + ++S++   +  ++EI  ++ N   + A      
Sbjct: 671 RFLSRIWKLYINCAKNVNIKSNSYPDKEKSLIKSMNIAIKEISNDILNNQFNTA------ 724

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +SE+ +++++     L  +  D  +    + ++ ++   ILL  F P +A +I+ ++
Sbjct: 725 -ISELMKFYNS-----LSNSINDVNNN---LKIDALKTFCILLAPFAPHIAEEIWHLI 773


>gi|161751094|ref|NP_377157.2| valyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|90108445|sp|Q972A3|SYV_SULTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 809

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    +  TG+  +    +  F PA + + G DI+R    Y  +   +L+ N+P  
Sbjct: 473 VWIDSSVTVIYLTGFYTDKRKFEKTF-PASVRLQGTDIIRTWLFYTFFRTLVLTGNIPF- 530

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V  +G +L   G ++SKS GNV++P++ ++E G D++R  L+ +   G D  +  + +
Sbjct: 531 KEVLINGQVLGPDGTRMSKSKGNVVNPLDKVDEFGADSIRLTLL-DARIGDDFPFKWETV 589

Query: 347 KKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
             R    L   + N    S   I  K +D     P      D  IL    R +++  E  
Sbjct: 590 --RGKKLLLQKLWNAGRLSYPFIGKKKFD----RPSNLHPIDRWILQEHKRFVKKSIEAY 643

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            N   ++ +  + S   E   D Y +      +K        + LY    V + L I+L 
Sbjct: 644 NNYDFYQVVESLYSYFWETIADEYLEL-----IKHRLFAEDLSALYTLSRVFKDLLIILH 698

Query: 464 AFVPKLANKIFDILF 478
              P +  ++++ L+
Sbjct: 699 PIAPHITEEMYNRLY 713



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           I T   + + + H+GHAY + IAD + RF RL G +VL   G D  G
Sbjct: 55  IDTPPPFTSGELHMGHAYWVTIADTIGRFKRLQGYNVLLPQGWDTQG 101


>gi|323489509|ref|ZP_08094736.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396640|gb|EGA89459.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 920

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G LD  +  +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 522 IMDVWFDSGSSH---QGVLDEREDLQ---YPADLYLEGSDQYRGWFNSSLTTSVAINGHA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + SHGF L   G K+SKSLGNVI P +V+ ++G D LR ++ 
Sbjct: 576 PY-KGILSHGFTLDGNGRKMSKSLGNVIVPSKVMNQMGADILRLWVA 621



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D++ R   + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDLHMGHALNKVLKDMIVRSRSMMGFHAPYVPGWDTHGLPIEQALTNKGVNRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI-LWKKISDKG 117
            +   FR + +       D  R+  KR                 ++  +I ++ K+++KG
Sbjct: 115 MSLAEFRKLCEEYAFQQIDNQRSQFKRIGVRGDWENPYVTLKPAYEARQIEVFGKMANKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 YIYKGLKPVYWSPSSESSLAEAEI 198


>gi|320160476|ref|YP_004173700.1| leucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994329|dbj|BAJ63100.1| leucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 818

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T + YP+   HIGH Y M  +D  ARF R+ G +VLF  G D  G     AA 
Sbjct: 36  KPKHYALTMLPYPSGNLHIGHWYAMTPSDARARFMRMRGYNVLFPMGFDAFGLPAENAAI 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  K +  QN  N R     +   +D
Sbjct: 96  KRNIHPKEWTYQNIDNMRRQLKSMGAMFD 124



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 24/188 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  +  +W P D +  G +    H IY   F        +   N P+  ++ + G IL  
Sbjct: 524 DPKEYDYWMPVDTYTGGAEHATMHLIYTRFFHKACRDIGITKGNEPM-IQLRNQGQILGP 582

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+++SKS GNV+DP E +   G D +R FL+      + G +  + ++         G+
Sbjct: 583 DGQRMSKSRGNVVDPDEQVRMYGADTVRAFLMFGYRWAEGGPWGTENIQ---------GV 633

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R  S  L + DG       F      +      V ++  E   N ++    + ++
Sbjct: 634 NRWLRRVWSFFLDEADGGKADEATFKRLRRKVHQTLRSVTRDFEEFEFNTIV----SALM 689

Query: 419 SLVSEVDR 426
            L +E+ R
Sbjct: 690 ELANEMSR 697


>gi|312171717|emb|CBX79975.1| Leucyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 860

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWHRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +    + V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDMTVLANEQVI---DGCCWRCD-SKVERKEIPQWFVKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 KLESWPEQVKTMQR 221


>gi|325048883|dbj|BAJ79309.1| putative valyl-tRNA synthetase [Rhodococcus erythropolis]
          Length = 894

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 27/149 (18%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ DN      KF+P  + V G DIL     +W A ++  
Sbjct: 454 DPD-VLDTWFSSGLWPFSTMGWPDNTP-ELEKFYPTSVLVTGYDIL----FFWVARMMMF 507

Query: 281 -----------------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGV 322
                             A +P  K VF HG +  + G+K+SKS GN IDP++ ++  G 
Sbjct: 508 GTYVSEDESITAGPGKSGAQMPF-KDVFLHGLVRDQYGKKMSKSRGNGIDPLDWVDRFGA 566

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVN 351
           DALR+ L R    G D    +D  +   N
Sbjct: 567 DALRFTLARGANPGSDLSVGEDSAQSSRN 595



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 22/121 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + DVL+R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 65  HMGHALDHTLMDVLSRRKRMQGYEVLWLPGMDHAGIATQSVVEKQLAADGKTKEDFGREL 124

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T ++      + ++K++ D+G IY
Sbjct: 125 FIDKVWDWKRESGGTIGGQMRRIGDGVDWSRDRF--TMDEGLSRAVQTVFKRMFDEGLIY 182

Query: 121 K 121
           +
Sbjct: 183 R 183


>gi|315122106|ref|YP_004062595.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495508|gb|ADR52107.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 960

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 37/267 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +  T    +NP       WPA++++ G D  R  F      +     + 
Sbjct: 562 ILDVWFDSACTHAITLE--ENPKLQ----WPANVYLEGSDQHRGWFQHSLLESCATRGST 615

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    + +HGF +   GEK+SKS GNVI P  +I E G D LR+++V         ++D 
Sbjct: 616 PF-TSLITHGFAVDENGEKMSKSKGNVIFPDTIISESGADILRFWVV------NSDYHDD 668

Query: 344 DGLKKRV---NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             L K +   N D    + N +   + ++  D  G  P+     E +  IL   + + Q 
Sbjct: 669 QRLGKNIIQTNIDAYRKLRNTIRWMLGVLAHD-TGKEPSLSDVPELERFILHRITELDQT 727

Query: 401 IRENMQN---QLIHRALAQVISLVSEVDRYFDAQK-------PWELKKTNPDRASTVLYV 450
           +RE   N   + I R L    S       YFD +K       P  LK+       + + V
Sbjct: 728 VREAYDNFDFKTIVRTLMN-FSNFELSSFYFDIRKDSLYCDSPSSLKRL------SSIAV 780

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++ R L + L   +P  A + +  L
Sbjct: 781 IRKLCRSLILWLAPMLPFTAEEAWSCL 807



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +R+K  +     Y N   HIGHA   I+ DV+ R  ++ G D     G D HG  I
Sbjct: 52  DRKKFVLHDGPPYANGHLHIGHALNKILKDVVVRSFQMRGFDACLVPGWDCHGLPI 107


>gi|297380718|gb|ADI35605.1| leucyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 806

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|317047302|ref|YP_004114950.1| leucyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948919|gb|ADU68394.1| leucyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 860

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N +  ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIQYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFVKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEDWPEQVKTMQR 221


>gi|62185261|ref|YP_220046.1| valyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312583|sp|Q5L5J6|SYV_CHLAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|62148328|emb|CAH64095.1| valyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 940

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 95/244 (38%), Gaps = 77/244 (31%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + L+D  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLREFVASDAIKIFPPEFTKNYLTWVNN-LRDWCISRQLW-WGHRIPVWY 420

Query: 222 ---------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
                                 DP+       ++  W  +    LT  G+ D+  G   K
Sbjct: 421 HKSDAHRMLCYDGEGIPEEVAKDPESWEQDPDVLDTWFSSGLWPLTCLGWPDSECGDLEK 480

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS----HGFILHKG---------- 300
           F+P  + V G DIL F   +    +L  +  + KK FS    HG I  K           
Sbjct: 481 FYPTAVLVTGHDILFF---WVTRMVLLCSAMVGKKPFSDVFLHGLIFGKSYKRYNDLGEW 537

Query: 301 -------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                    EK+SKS GNVIDP+E+I + G DA+R  L    +C
Sbjct: 538 TYITGEEKYAYDMGKALPKGVIAKWEKLSKSKGNVIDPLEMIAKYGADAVRMALC---SC 594

Query: 336 GKDG 339
              G
Sbjct: 595 ANRG 598



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 24/159 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT--KVFVDQNSR 78
           H+GHA    + DVL R+ R+ G +V +  GTD  G       +    ++  K  VD +  
Sbjct: 54  HMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTVVERHLYSSLGKRRVDFSRE 113

Query: 79  NF-------------------RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            F                   R +    D S   F  T E   +   +  +K + DKG I
Sbjct: 114 EFLEHVWQWKEKSEGVILSQLRQLGCSCDWSRLRF--TMEPLANRAVKKAFKILFDKGHI 171

Query: 120 YKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           Y+G Y   W  +   A  +D+  Y+  DG  Y  ++  V
Sbjct: 172 YRGNYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRVV 210


>gi|239613193|gb|EEQ90180.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 919

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 52/193 (26%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHMGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    +  QN  N ++    +   +D                 W ++        GC
Sbjct: 123 ERGIDPARWTMQNIANMKEQLRAIGARFD-----------------WDRVD-----ANGC 160

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL----SY 179
              W S              GA           V+ +E + +FFR++A+++ LL    S 
Sbjct: 161 --SWRS--------------GAK----------VEKVELKQWFFRITAFKEALLKDLDSL 194

Query: 180 YESHPEFILPIER 192
               PE +L ++R
Sbjct: 195 AAGWPERVLSMQR 207


>gi|326622392|gb|EGE28737.1| Aminoacyl-tRNA synthetase, class Ia [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 941

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 111 ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 170

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 171 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 230

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 231 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADELL 284


>gi|255994163|ref|ZP_05427298.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993831|gb|EEU03920.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 817

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y+     YP+ + H+GH     I D +AR+  L G +VL   G D  G     A
Sbjct: 30  KNKKKYYVLEMFPYPSGKLHMGHVRNYAIGDAIARYKSLKGFNVLHPIGFDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N +        L  SY  D  + T+ K ++   + L+ K+ +KG +
Sbjct: 90  AIKKGVKPDKWTYSNIKEMEVQLRELGFSYDWDREVTTSSKDYYKWTQWLFIKMHEKGLV 149

Query: 120 YK 121
           YK
Sbjct: 150 YK 151



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 26/213 (12%)

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           RF  ++     L+ +    K + + G +L  G K+SKS+GN+++P ++I+  G D  R F
Sbjct: 543 RFFQMFMKDIGLTKDEVPFKNLLTQGMVLKNGTKMSKSIGNIVEPSDIIKTYGADTARLF 602

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDY-DGMIPTPGAFTE 385
           ++ +    +D  +  +G+          G    ++R   + L  KD  D  +    A  E
Sbjct: 603 VLFQAPPERDLEWSDEGVV---------GSFKFLNRVYRLALEYKDVKDVSLEELSASCE 653

Query: 386 SDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            D+ ++S     ++++  ++      + A++ V+ LV+ + +Y          K N    
Sbjct: 654 DDKKLISKIHMTIKKVDSDLDKHFGFNTAISAVMELVNMIYKY----------KENTGAD 703

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++   V VI   ++LL  FVP ++++I ++L
Sbjct: 704 KELIKCAVSVI---SVLLMPFVPHISSEIGNML 733


>gi|261190895|ref|XP_002621856.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239590900|gb|EEQ73481.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 919

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 52/193 (26%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA 
Sbjct: 63  KEKAYVLSMFPYPSGALHMGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    +  QN  N ++    +   +D                 W ++        GC
Sbjct: 123 ERGIDPARWTMQNIANMKEQLRAIGARFD-----------------WDRVD-----ANGC 160

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL----SY 179
              W S              GA           V+ +E + +FFR++A+++ LL    S 
Sbjct: 161 --SWRS--------------GAK----------VEKVELKQWFFRITAFKEALLKDLDSL 194

Query: 180 YESHPEFILPIER 192
               PE +L ++R
Sbjct: 195 AAGWPERVLSMQR 207


>gi|238810052|dbj|BAH69842.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 794

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 10/191 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI +   YP+   H+GH     I DVLAR++R  G +VL   G D  G     AA   G+
Sbjct: 49  YILSMFPYPSGNIHMGHVRNYAIGDVLARYYRRKGFNVLHPFGWDAFGLPAENAAIKNGI 108

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             K +  +N +N       L IS+  +    T ++ +    ++++ K+  KG +Y+    
Sbjct: 109 HPKDWTYKNIKNMNPKLKDLGISFAWNYECITADEIYTKWEQLIFIKMWKKGLVYRKKAL 168

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LSYYES 182
             +   D+    +++V    DG+ +   +  VQ  E E Y+ ++  Y ++L   L   ++
Sbjct: 169 LNWCENDQTVLANEQV---EDGKCWRCGNIVVQ-KEMEQYYLKIRNYAEELQNDLELLKN 224

Query: 183 H-PEFILPIER 192
           H P+ +L +++
Sbjct: 225 HWPDKVLMMQK 235



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G IL  G K+SKS GNV+ P E+I++   D +R F++
Sbjct: 545 LLTQGMILKDGLKMSKSKGNVVSPDEMIKKYDADTMRLFVL 585


>gi|255280019|ref|ZP_05344574.1| leucine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255269110|gb|EET62315.1| leucine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 821

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 27/185 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK- 299
           D  K K+W P D +  G + +  H IY   W  FL      N P P  K  + G IL   
Sbjct: 538 DPEKLKYWMPVDWYNGGMEHVTRHMIYSRFWHHFLYDIGVVNTPEPYAKRTAQGLILGPD 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP++V+EE G D LR +++         F    G     + +   G  
Sbjct: 598 GDKMSKSKGNVVDPLDVVEEYGADVLRTYVL---------FMGDYGAATPWSENSVKGCK 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R  ++       M+   G   E    + S   + ++++  +++    + A+A ++ 
Sbjct: 649 RFLERVAALT-----DMVSGEGVTPE----LESAFHKTIKKVSNDLEETKFNTAIAALMG 699

Query: 420 LVSEV 424
           LV+++
Sbjct: 700 LVNDI 704



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       +V++R  R++G +VLF  G D  G      
Sbjct: 50  DKPKFYGLVEFPYPSGAGMHVGHIKAYSSLEVISRKRRMEGYNVLFPIGFDAFGLPTENY 109

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   D N   F +    +  S+  D  I TTE+ ++   + ++ K+ + G +
Sbjct: 110 AIKTGQHPRKITDDNIVKFTNQLKRVGFSFDWDRVIDTTEEDYYKWTQWIFLKMFENGLV 169

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           ++      Y    +   ++++    + G   +  H+ +    +  ++ R++ Y DKLL
Sbjct: 170 FRDTALVNYCPSCKVVLSNED----SQGGKCDICHSDIVQKSKTVWYLRITKYADKLL 223


>gi|312144034|ref|YP_003995480.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904685|gb|ADQ15126.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 831

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E  Y+     YP+   H+GH     I DV+AR+ R++G +VL   G D  G     AA
Sbjct: 31  DKENYYVLEMFPYPSGNLHMGHVRVYSIGDVVARYKRMEGYNVLHPMGWDAFGLPAENAA 90

Query: 63  -QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
            ++  +  K +  QN  + ++    + +SY  D  + T  K ++   +  + K+ ++   
Sbjct: 91  IKHGNIHPKEWTWQNIAHMKEQMKAMGLSYDWDREVTTASKDYYKWTQWFFAKMFERDLA 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W    +    N+  V +G +          V+  E E +F +++ Y D+LL
Sbjct: 151 YRKESTVNWCPSCETVLANEQVVNEGCE-----RCGTEVEPRELEQWFLKITDYADRLL 204



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 109/233 (46%), Gaps = 28/233 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL-LSANLPLPKKV------FSHGFILHKGEKISKS 306
           K++P D ++ G +    H +Y   F  +  ++ + + V       + G +L  G K+SKS
Sbjct: 530 KWFPVDQYIGGIEHAILHLLYSRFFTKVVHDMGMAEAVEPFTNWLAQGMVLKDGAKMSKS 589

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP +++EE G D  R F++      KD  +   G++       AN   N V R +
Sbjct: 590 KGNVVDPKDILEEYGADTARLFILFASPPEKDLEWSNKGVEG------ANRFLNRVWRYI 643

Query: 367 S---MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVS 422
           +    I++  +G +       +  + +  +    ++++ E++  +L  + A++ ++ L +
Sbjct: 644 TENIEIIRSGEGEV-IADELDKEAKKLYRIMHSSIKKVSEDIGERLNFNTAISAIMELTN 702

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           EV  Y +        + N +  S++L    E      +LL  F P L+ ++++
Sbjct: 703 EVYSYLN-------DRDNAEINSSLLRAAAE---NTLLLLAPFAPFLSEELWE 745


>gi|302135143|ref|ZP_07261133.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 868

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G  VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKSVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 32/184 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADL 354
           EK+SKS  N IDP  +I++ G D  R F++        +     G        +RV    
Sbjct: 626 EKMSKSKKNGIDPQTMIDQYGADTCRLFMMFASPPDMSLEWSDSGVEGSHRFLRRVWRLA 685

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRA 413
              +G   S S+ +             A T+  +++     + +++  +++ QNQ  + A
Sbjct: 686 QAHVGQGASGSLDI------------AALTDEQKAVRRSIHQAIKQASQDIGQNQKFNTA 733

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +AQV++L++ +++   A        T  DRA     +  E +  + +LL    P +++++
Sbjct: 734 VAQVMTLMNVLEKAPQA--------TPQDRA-----LLQEGLETVTLLLAPITPHISHEL 780

Query: 474 FDIL 477
           +  L
Sbjct: 781 WTQL 784


>gi|227540565|ref|ZP_03970614.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239647|gb|EEI89662.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 884

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 46/343 (13%)

Query: 158 QWME--EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            WME  ++    R   +  ++ ++Y    E+++   +   +  F   G        K+ D
Sbjct: 404 HWMENVKDWCISRQLWWGQRIPAWYNDKNEWVVAKTQEEAIQEFTSQG--------KSAD 455

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY 274
            GI+  DD   ++  W  +    ++    + NP+     ++ P +  V   +IL F    
Sbjct: 456 -GIRQEDD---VLDTWFSSGLWPMSVFDGVRNPENEDFNYYYPTNDLVTAPEILFF---- 507

Query: 275 WPAFLL------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
           W A ++      +   P  K V+  G +  K G K+SKSLGN  DPIE++E+ G D +R 
Sbjct: 508 WVARMMIMGHNYTGKAPF-KNVYLTGIVRDKLGRKMSKSLGNSPDPIELMEQYGTDGVRV 566

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTES 386
            ++     G D  +D    ++  N   AN I N        ++K ++    P P A   S
Sbjct: 567 GMLLSSPAGNDLMFDVSYCEQGRN--FANKIWNAFR-----LVKGWEISNEPAPEADRTS 619

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                S  ++ L EI E+  +  +  AL     L+      +D    W L+   P   S 
Sbjct: 620 AAWFESRFNQALVEIEEHFASYRLSDALMATYKLI------WDDFCAWYLELIKPAYGSP 673

Query: 447 VLYVTVEVIR----QLAILLQAFVPKLANKIF-DILFVADENR 484
           +   T E  +    ++  L   F+P L  +++ D LF   E++
Sbjct: 674 IPAETFETAKGFFQRVLTLAHPFMPFLTEELWHDELFGKREDK 716


>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 924

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLVERDD------LMRPADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E+ G D LR ++ 
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQFGADILRLWVA 621



 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 18/156 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  ++G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTKVF----------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
               GV  K                  +D   R F+ +    D  +D+   T +  +   
Sbjct: 105 LAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGD--WDNPYITLKPEYEAQ 162

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              ++ +++ KG IYKG    ++S   E+   + E+
Sbjct: 163 QIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198


>gi|203284171|ref|YP_002221911.1| leucyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690557|sp|B5RL76|SYL_BORDL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|201083614|gb|ACH93205.1| leucyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 842

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 3/178 (1%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G      
Sbjct: 33  KEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPMGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F++    L  +Y  D  I+T +  ++   + ++ ++  KG  
Sbjct: 93  AIQTGKHPKKITEKNIEKFKEQIKALGFAYDWDREIKTHDVNYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y      WY         ++EV +  DG       + V+      +  +++ Y ++L+
Sbjct: 153 YTKEIPVWYCPDLGTVLANEEVIQTPDGPRSERGFHKVERKPLRQWLLKITKYAERLI 210


>gi|331007753|ref|ZP_08330877.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418437|gb|EGG92979.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 866

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLAMFPYPSGKLHMGHVRNYTITDVISRFQRMLGKNVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++  + L   +D    + T +  ++   +  + ++ +KG +YK
Sbjct: 92  QNNTAPAKWTYSNIDYMKEQLNSLGFGFDWNRELATCQPSYYKWEQWFFTRLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V    DG+ + +    V+  E   +F +++ Y D+LL+  +
Sbjct: 152 KMSTVNWDPVDQTVLANEQVI---DGKGWRSGAT-VERKEIPQWFIKITDYADELLTSLD 207

Query: 182 SHPEF 186
             P++
Sbjct: 208 DLPDW 212


>gi|313669053|ref|YP_004049337.1| isoleucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006515|emb|CBN87979.1| putative isoleucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 929

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 39/275 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVLKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEI 647

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                   +R+   L+    NL            +  +P      E D   L +  R+ +
Sbjct: 648 LKRVTESYRRIRNTLSFLFANLSD------FNPIEDAVPQ-AEMVEIDRYALVLARRLQE 700

Query: 400 EIRENMQNQ-LIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVL 448
            +  +   +   H A+ +++S  SE           DR +  Q     +++    A T L
Sbjct: 701 RVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTQADSRARRS----AQTAL 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y    + R L +L+   +     + +DI+   +E+
Sbjct: 757 Y---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|161484947|ref|NP_713894.2| leucyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|32171559|sp|Q8EZY7|SYL_LEPIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|293386231|gb|AAN50912.2| leucyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 863

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 54/246 (21%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGF 295
           +L +P+  K K+ P +L+V G +    H +Y   W  FL     +S   P   K+   G 
Sbjct: 570 FLCDPELEK-KWMPVNLYVGGSEHAVLHLLYSRFWHKFLFDIGAVSTKEPF-DKLIHQGL 627

Query: 296 ILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           IL + + K+SKSLGNV++P +VI+E G D+LR F         + F     + K  +   
Sbjct: 628 ILGEDKRKMSKSLGNVVNPDDVIKEYGADSLRLF---------EMFMGPLEMVKPWSTRG 678

Query: 355 ANGIGNLVSR------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             G+   ++R      S S      D + PTP          L +  + +Q++ E++ N 
Sbjct: 679 VEGVFRFLNRIWRLFHSGSQESFRLDDVEPTPEE--------LKILHKTIQKVNEDIPNF 730

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+AQ++  V+E               T  DR         +V+    +LL  F P 
Sbjct: 731 SFNTAIAQLMIFVNEF--------------TPSDRRPK------KVLESFILLLAPFAPH 770

Query: 469 LANKIF 474
           +A +++
Sbjct: 771 IAEELW 776



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 30  KPKFYCLDMFPYPSGAGLHVGHPEGYTATDILSRFKRMKGFEVLHPMGWDAFGLPAERYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G+   +    N  NFR    ++ +SYD
Sbjct: 90  MQTGIHPAITTKDNIDNFRRQIQMIGLSYD 119


>gi|108805982|ref|YP_645919.1| leucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123068795|sp|Q1AR71|SYL_RUBXD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|108767225|gb|ABG06107.1| leucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 817

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T + YP+   H+GH Y M  +D  ARF R+ G  V F  G D  G     AA 
Sbjct: 41  KPKHYALTMLPYPSGDLHVGHWYAMTPSDTRARFMRMRGYRVFFPIGFDAFGLPAENAAI 100

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+  + +    +++     R M  + D  +D  + T +  ++   +  + K  +KG  
Sbjct: 101 KRGIHPRDWTYSNIERMRGQLRQMGTMFD--FDAEVVTCDPEYYRWNQWFFLKFYEKGLA 158

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S   +L  E     D   +  D      + N  QW+      F+++ Y 
Sbjct: 159 YREKAPVDWCPSCNTTLAREQVVGPDRRCERCDTPV--IKRNLAQWL------FKITDYA 210

Query: 174 DKLLSYYE-SHPEFILPIER 192
           ++LL + E   PE +  ++R
Sbjct: 211 EELLDFSEIEWPERVKALQR 230



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 44/246 (17%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D  +   W P D +  G +    H +Y   F        L+  + P+  ++F+ 
Sbjct: 520 YEEGPFDPERGSRWLPVDQYTGGIEHATMHLLYTRFFTKVMRDLGLVDFDEPM-LRLFNQ 578

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G IL   G ++SKS GNV++P E ++  G D LR +L+      + G +D  G++     
Sbjct: 579 GVILGPDGNRMSKSRGNVVNPQEYVDRYGSDVLRCYLMFIGPWDEGGPWDPGGIE----- 633

Query: 353 DLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
               G+   + R+ +++   D       PG  +     ++   +  L+  R N     + 
Sbjct: 634 ----GVARWLRRAFTLVAGGDVSEAEADPGELSRRTHRLVKRVTEYLEGFRFNTAIAALM 689

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
                ++++  EV      ++ W                  E +R   ++L  F P  A 
Sbjct: 690 EHTNYLLAVKGEV-----GEEEWR-----------------EAMRSFLLVLAPFAPHHAE 727

Query: 472 KIFDIL 477
           ++++IL
Sbjct: 728 EMWEIL 733


>gi|330836072|ref|YP_004410713.1| leucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329747975|gb|AEC01331.1| leucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 843

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 11/178 (6%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+A+  H+GH       D+  RF R++G +VL   G D  G      A 
Sbjct: 39  KRQYVLDMFPYPSAEGLHVGHPEGYTATDIYCRFLRMNGYNVLHPMGFDSFGLPAETYAL 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +V  + +  NFR     L  SY  D  I T E  ++   + +++++   G  Y+
Sbjct: 99  KTGIHPRVTTEASIANFRKQIKSLGFSYDWDREISTHEPEYYRWTQWIFEQLYKMGLAYE 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D A  +++EV +G   +      + N  QW+       +++AY D+L+
Sbjct: 159 SEMPVNWCSHDNAVLSNEEVKEGRCERCGTPVIRRNIRQWV------LKITAYADRLI 210


>gi|189183152|ref|YP_001936937.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189179923|dbj|BAG39703.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 839

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 21/199 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI     YP+ + H+GH     I DV+ARF R  G +VL   G D  G     AA   
Sbjct: 30  KRYILPMFPYPSGKAHVGHVRNYTICDVIARFERSQGHNVLHAMGWDAFGLPAENAAMQN 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-KG 122
                 +V+ N    +     + +SYD    I T   +++   +  + ++  KG +Y K 
Sbjct: 90  NTHPNSWVNSNVDVMKRQLKAIGLSYDWSREIITCSPQYYVHEQRFFLEMLKKGLVYQKE 149

Query: 123 CYSGW-----YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               W       L +E   N      GA  +Y N +    QW      F +++ Y D LL
Sbjct: 150 SLVNWDPVDQTVLANEQVINGKGWRSGAIIEYRNLK----QW------FIKITNYADALL 199

Query: 178 S---YYESHPEFILPIERR 193
                 +S PE +  ++++
Sbjct: 200 KGLDSLQSWPESVKTMQKK 218


>gi|145629339|ref|ZP_01785138.1| methionyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145642101|ref|ZP_01797671.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144978842|gb|EDJ88565.1| methionyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145273180|gb|EDK13056.1| methionyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 141

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   A   
Sbjct: 7   KILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKL 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           G+T +  + +  + + RD A   +IS+D++  T  + +      ++ K+   G I
Sbjct: 67  GITPEELIAKAKADHIRDFAG-FNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120


>gi|77166123|ref|YP_344648.1| leucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254436091|ref|ZP_05049598.1| leucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123730613|sp|Q3J7S8|SYL_NITOC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76884437|gb|ABA59118.1| leucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089202|gb|EDZ66474.1| leucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 819

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMRGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N  + R     L  +YD    + T +  ++   + L+ K+  KG +YK
Sbjct: 92  QNRVPPAQWTYENIDHMRRQLKRLGFAYDWSRELATCQPDYYRWEQWLFTKLFAKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY ++LL+  +
Sbjct: 152 KTALVNWDPVDQTVLANEQVI---DGRGWRS-GALVERREIPQWFLKITAYGEELLTALD 207

Query: 182 ---SHPEFILPIER 192
                PE +  ++R
Sbjct: 208 GLTGWPEQVRAMQR 221



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +  +W P D ++ G +    H +Y   F        L+ ++ P    + + G +L  G K
Sbjct: 518 RGDYWLPVDQYIGGIEHAVLHLLYARFFHKVMRDMGLVRSDEPF-THLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP  +IE  G D  R F++
Sbjct: 577 MSKSKGNTVDPQALIEHYGADTARLFIM 604


>gi|84516029|ref|ZP_01003390.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510471|gb|EAQ06927.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 979

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 243 GYLDNP-DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--- 298
           G L  P D    K++P D+ + G+DIL F    W A ++  +  +  +   H   LH   
Sbjct: 563 GTLGWPADDPAMKYFPGDVLITGQDILFF----WVARMMMMSQAVMAQDPFHTIYLHQLV 618

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              KGEK+SK+ GNVIDP+++I++ G DALR+   +  A G
Sbjct: 619 RDAKGEKMSKTKGNVIDPLDMIDQYGADALRFSNAQMAAIG 659



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   + D+L R+ R+ G D L+  G D           +AG+ T++ V+++
Sbjct: 52 HVGHAFNHTLMDILTRWKRMQGFDTLWQPGLD-----------HAGIATQLMVEKD 96


>gi|267992383|gb|ACY87268.1| hypothetical protein STM14_0756 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|323128965|gb|ADX16395.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 941

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 111 ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 170

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 171 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 230

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 231 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 284


>gi|45656415|ref|YP_000501.1| leucyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798562|sp|Q72UY6|SYL_LEPIC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|45599650|gb|AAS69138.1| leucyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 863

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 54/246 (21%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGF 295
           +L +P+  K K+ P +L+V G +    H +Y   W  FL     +S   P   K+   G 
Sbjct: 570 FLCDPELEK-KWMPVNLYVGGSEHAVLHLLYSRFWHKFLFDIGAVSTKEPF-DKLIHQGL 627

Query: 296 ILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           IL + + K+SKSLGNV++P +VI+E G D+LR F         + F     + K  +   
Sbjct: 628 ILGEDKRKMSKSLGNVVNPDDVIKEYGADSLRLF---------EMFMGPLEMVKPWSTRG 678

Query: 355 ANGIGNLVSR------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             G+   ++R      S S      D + PTP          L +  + +Q++ E++ N 
Sbjct: 679 VEGVFRFLNRIWRLFHSGSQESFRLDDVEPTPEE--------LKILHKTIQKVNEDIPNF 730

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+AQ++  V+E               T  DR         +V+    +LL  F P 
Sbjct: 731 SFNTAIAQLMIFVNEF--------------TPSDRRPK------KVLESFILLLAPFAPH 770

Query: 469 LANKIF 474
           +A +++
Sbjct: 771 IAEELW 776



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 30  KPKFYCLDMFPYPSGAGLHVGHPEGYTATDILSRFKRMKGFEVLHPMGWDAFGLPAERYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G+   +    N  NFR    ++ +SYD
Sbjct: 90  MQTGIHPAITTKDNIDNFRRQIQMIGLSYD 119


>gi|238693262|sp|B4RX92|SYL_ALTMD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 867

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 12/189 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 32  EKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N    ++    L   Y  D  + T +  ++   +  + ++ +KG +Y
Sbjct: 92  INNNTAPAKWTYSNIDYMKNQLRSLGFGYDWDREVTTCKSDYYRWEQWFFTRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P QW      F +++ Y ++LL
Sbjct: 152 KKNSTVNWDPVDQTVLANEQVIDGRGWRSGALVEQKEIP-QW------FIKITDYAEELL 204

Query: 178 SYYESHPEF 186
              E   E+
Sbjct: 205 QDLEQLEEW 213


>gi|259909122|ref|YP_002649478.1| leucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964744|emb|CAX56261.1| Leucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479150|emb|CAY75066.1| leuS [Erwinia pyrifoliae DSM 12163]
          Length = 860

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +    + V+  E   +F +++ Y D+LL+   
Sbjct: 152 KTSAVNWCPHDMTVLANEQVI---DGCCWRCD-SKVERKEIPQWFVKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 KLESWPEQVKTMQR 221


>gi|49476194|ref|YP_034235.1| leucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|60390696|sp|Q6G1W2|SYL_BARHE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49239002|emb|CAF28302.1| Leucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 880

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN    R     L +S D   +F  T +  ++   ++L+     KG + 
Sbjct: 99  QNKVHPKTWTYQNIAVMRGQLKQLGLSVDWSREFA-TCDVDYYHRQQMLFLDFYQKGLVA 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V    DG+ + +    V+  E   +FF++S + + LL+  
Sbjct: 158 RKVAKVNWDPVDQTVLANEQV---VDGRGWRS-GALVEQRELTQWFFKISDFSEDLLAGL 213

Query: 181 E 181
           E
Sbjct: 214 E 214



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 13/125 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++       A+    
Sbjct: 637 EKMSKSKKNVVDPDDIIASYGADTVRWFILSDSPPERDVIWTESGVEG------AHRFVQ 690

Query: 361 LVSRSVSM---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            V R V++   +L+D    +   GA  +    +  V  R L  + ++++    +RA+A++
Sbjct: 691 RVWRCVALSAPVLRDVVPCVGKQGAALQ----LSKVAHRTLYAVEDDLEKFAFNRAIARL 746

Query: 418 ISLVS 422
              ++
Sbjct: 747 YEFLN 751


>gi|260946053|ref|XP_002617324.1| hypothetical protein CLUG_02768 [Clavispora lusitaniae ATCC 42720]
 gi|238849178|gb|EEQ38642.1| hypothetical protein CLUG_02768 [Clavispora lusitaniae ATCC 42720]
          Length = 955

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 39/88 (44%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  +  T   YP+   H+GH     I+DVLARF RL G DV+   G D  G     AA  
Sbjct: 92  EPFFCLTMFPYPSGNLHLGHQRVFTISDVLARFKRLQGFDVIHPMGWDAFGLPAENAAVE 151

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
            GV    +  QN    ++    +   +D
Sbjct: 152 RGVNPATWTKQNIAKMKEQMHAMLADFD 179


>gi|226307287|ref|YP_002767247.1| valyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226186404|dbj|BAH34508.1| valyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 894

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 27/149 (18%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL-- 280
           DP  ++  W  +     +T G+ DN      KF+P  + V G DIL     +W A ++  
Sbjct: 454 DPD-VLDTWFSSGLWPFSTMGWPDNTP-ELEKFYPTSVLVTGYDIL----FFWVARMMMF 507

Query: 281 -----------------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGV 322
                             A +P  K VF HG +  + G+K+SKS GN IDP++ ++  G 
Sbjct: 508 GTYVSEDESITAGPGKSGAQMPF-KDVFLHGLVRDQYGKKMSKSRGNGIDPLDWVDRFGA 566

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVN 351
           DALR+ L R    G D    +D  +   N
Sbjct: 567 DALRFTLARGANPGSDLSVGEDSAQSSRN 595



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 22/121 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA +  + DVL+R  R+ G +VL+  G D  G   Q + +    A   TK      +
Sbjct: 65  HMGHALDHTLMDVLSRRKRMQGYEVLWLPGMDHAGIATQSVVEKQLAADGKTKEDFGREL 124

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+                R + D +D S D F  T ++      + ++K++ D+G IY
Sbjct: 125 FIDKVWDWKRESGGTIGGQMRRIGDGVDWSRDRF--TMDEGLSRAVQTVFKRMFDEGLIY 182

Query: 121 K 121
           +
Sbjct: 183 R 183


>gi|254488853|ref|ZP_05102058.1| isoleucyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214045722|gb|EEB86360.1| isoleucyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 971

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 50/212 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSG---------LK 205
           V W+ ++G        +++L S  E+ P+++L  +R   V    F K G         L+
Sbjct: 482 VNWVPKKG--------RNRLYSMMEARPDWVLSRQRAWGVPLTCFTKKGALPTDADFLLR 533

Query: 206 DLSLSRKTFD---------W-----------GIKIPDDPQY---IMYVWIDALTNYLTTT 242
           +  ++++  D         W           GI  PDD      I+ VW D+ + +    
Sbjct: 534 NPDVNQRIVDAFEADGADVWYEDGAKERFLGGIVNPDDYNQVFDILDVWFDSGSTHAFV- 592

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
              D PDG+K     AD+++ G D  R  FH+    +   + + P  + V +HGF L  K
Sbjct: 593 -LRDRPDGTKDGI--ADVYMEGTDQHRGWFHSSLLQSVGTTGHAPY-RNVVTHGFTLDEK 648

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           G K+SKS+GN I P +++++ G D LR ++ +
Sbjct: 649 GMKMSKSIGNTIVPEKIVQQYGADILRLWVAQ 680



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 65  YANGHLHIGHALNKTIKDMIVRSHQMMGFDARYIPGWDCHGLPI 108


>gi|213966842|ref|ZP_03394993.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301381973|ref|ZP_07230391.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058767|ref|ZP_07250308.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|213928692|gb|EEB62236.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 868

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G  VL   G D  G     AA 
Sbjct: 32  KETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKSVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 32/184 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADL 354
           EK+SKS  N IDP  +I++ G D  R F++        +     G        +RV    
Sbjct: 626 EKMSKSKKNGIDPQTMIDQYGADTCRLFMMFASPPDMSLEWSDSGVEGSHRFLRRVWRLA 685

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRA 413
              +G   S S+ +             A T+  +++     + +++  +++ QNQ  + A
Sbjct: 686 QAHVGQGASGSLDI------------AALTDEQKAVRRSIHQAIKQASQDIGQNQKFNTA 733

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +AQV++L++ +++   A        T  DRA     +  E +  + +LL    P +++++
Sbjct: 734 VAQVMTLMNVLEKAPQA--------TPQDRA-----LLQEGLETVTLLLAPITPHISHEL 780

Query: 474 FDIL 477
           +  L
Sbjct: 781 WTQL 784


>gi|119953611|ref|YP_945821.1| isoleucyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|259511498|sp|A1R0Q9|SYI_BORT9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119862382|gb|AAX18150.1| isoleucyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 1044

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 21/240 (8%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKSL N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSLRNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           P+EVI   G DALR +LV       D   Y  DG+K  V  ++   I N  S  ++  + 
Sbjct: 605 PMEVINTFGADALRLYLVMSPVIRADDLKYSDDGVKD-VLKNIIIPIWNAYSFFITYAI- 662

Query: 372 DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             D   P            D+ I+S    + + + E +    + +++ ++++ + +++ +
Sbjct: 663 -IDKFEPNNNINLHKTNILDKWIVSEIESLKKILNEEIDKYNLTKSIEELLAFIDKLNNW 721

Query: 428 F---DAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +     ++ W+ +  N   D   T+ Y    VI+ L ++L  F+P L  +I+  L   DE
Sbjct: 722 YIRRSRRRFWKSENDNDKIDAHETLYY----VIKNLMLMLAPFIPFLTEEIYQNLKTKDE 777


>gi|124516589|gb|EAY58097.1| Isoleucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 976

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++L      D  D      WPADL++ G D  R  FH+    +  L    
Sbjct: 544 ILDVWFDSGISHLAVLK--DKSD----THWPADLYLEGSDQHRGWFHSSLLTSMALFDTP 597

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  ++V +HGF++  +G K+SKSL NVI P+E+I + G + LR +
Sbjct: 598 PY-RQVLTHGFVVDGQGRKMSKSLKNVISPLEIINKYGAEILRLW 641


>gi|90421007|ref|ZP_01228911.1| leucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334785|gb|EAS48561.1| leucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 872

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 8/183 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA  
Sbjct: 34  EKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYRRAKGFNVLHPMGWDAFGMPAENAAMQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             V  + +  QN    R     + +S D   +F  T +  ++   ++L+     KG  Y+
Sbjct: 94  NKVHPREWTYQNIATMRGQLKSMGLSLDWSREFA-TCDVEYYHRQQMLFLDFLAKGLAYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V    DG+ + +  + V+  E   +FFR++ + D LLS  +
Sbjct: 153 KKSKVNWDPVDMTVLANEQVI---DGKGWRSGAD-VEQRELTQWFFRITDFADDLLSALD 208

Query: 182 SHP 184
             P
Sbjct: 209 HLP 211



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 14/177 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++       D   D+D +      + A+    
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFML------SDSPPDRDVIWTEAGVEGAHRFVQ 680

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R VS       G   +P +  E+  +I     R    + ++++    ++A+A++  L
Sbjct: 681 RLWRLVSETAPRIAGADASPQSEDEAVLTIRRAAHRAAAGVADDIERLGFNKAVARIYEL 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ +           +   + D    +     E +  L  L+   +P LA + +  L
Sbjct: 741 VNTLAA--------SVSGVSADSDPALKAAAREALTILVRLIAPMMPHLAEECWTTL 789


>gi|219684545|ref|ZP_03539488.1| leucyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671907|gb|EED28961.1| leucyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 840

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  DG       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|171319956|ref|ZP_02909031.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171094786|gb|EDT39825.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 864

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|85057936|ref|YP_456852.1| leucyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84790041|gb|ABC65773.1| leucyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 821

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 5/178 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+++  H+GH      +D+++RF R+ G +VL   G D  G    + A
Sbjct: 33  KKKFYCLDMFPYPSSEGLHVGHIEGYTASDIMSRFKRMQGFNVLHPFGWDSFGLPAEQYA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKG-DI 119
              G   + F  +N  NF+     +   + +D  + T++   +   + ++KK+ +KG  +
Sbjct: 93  LQTGKNPRNFTYENINNFKKQIQSIGKSVDWDRELATSDPYFYAWTQWIFKKLYEKGLAV 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     +      A  N +EV     G +    ++PV   + + +  +++ Y D+LL
Sbjct: 153 LKNIEVNFCPNLGTALAN-EEVISNEKGMFSERGNHPVVKKKMKQWVLKITQYADRLL 209


>gi|39939224|ref|NP_950990.1| leucyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722333|dbj|BAD04823.1| leucyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 821

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 3/177 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+++  H+GH      +D+++RF R+ G +VL   G D  G    + A
Sbjct: 33  QKKFYCLDMFPYPSSEGLHVGHIEGYTASDIMSRFKRMQGFNVLHPFGWDSFGLPAEQYA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   + F  +N  NF+     +   + +D  + T++   +   + ++KK+ +KG   
Sbjct: 93  LQTGKPPRTFTYENINNFKKQIQSIGKSVDWDRELATSDPYFYSWTQWIFKKLYEKGLAV 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  +         ++EV     G +    ++PV   + + +  +++ Y D+LL
Sbjct: 153 LKNTEVNFCPNLGTVLANEEVISNEKGMFSERGNHPVVKKKMKQWVLKITQYADRLL 209


>gi|322378713|ref|ZP_08053144.1| valyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380661|ref|ZP_08054813.1| valyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146983|gb|EFX41731.1| valyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148856|gb|EFX43325.1| valyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 877

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 13/113 (11%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFS 292
           L   G L +P   K  F+P  + + G DIL F    W A +L A       LP  K ++ 
Sbjct: 470 LGLEGVLFDPHDLK-DFYPNSVLITGFDILFF----WVARMLLAGESFLGELPF-KHIYL 523

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           H  +   KGEK+SKS GNVIDP+E+I   G D+LR+ L      G+D   +K+
Sbjct: 524 HALVRDEKGEKMSKSKGNVIDPLEIINTEGSDSLRFALAMLCVQGRDLRLNKE 576



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           HIGHA    + D+LARF R+DG  VL+  G D  G     A QN  V  K  ++Q 
Sbjct: 56  HIGHALTFSLQDILARFKRMDGYRVLYQPGLDHAG----IATQN--VVEKQLLEQG 105


>gi|301095003|ref|XP_002896604.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108922|gb|EEY66974.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 885

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 27/188 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  Y  +   YP+ Q HIGH     I+D +ARF R+ G DVL   G D  G     AA
Sbjct: 45  KKKPYYCLSMFPYPSGQLHIGHVRVYTISDCMARFKRMQGYDVLHPMGWDAFGLPAENAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G++   + + N    +     L I +D       +R   TC   + K +    I+  
Sbjct: 105 IERGISPADWTEANIAQAKKQLKALGIRFD------WEREVTTCAPDYYKWTQW--IFLQ 156

Query: 123 CYSGWYSLRDEAYYNDDEVYKG--------ADGQYYNA-----QHNPVQWMEEEGYFFRL 169
            ++   + R EA  N D V K         A+G+ + +     Q +  QW      F R+
Sbjct: 157 MFNKGLAYRKEALVNWDPVDKTVLANEQVDAEGRSWRSGAIVEQRSLNQW------FLRI 210

Query: 170 SAYQDKLL 177
           + Y ++LL
Sbjct: 211 TEYGNRLL 218


>gi|257784424|ref|YP_003179641.1| valyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472931|gb|ACV51050.1| valyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 895

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 51/247 (20%)

Query: 204 LKDLSLSRKTFDWGIKIP----DDPQY------------------------IMYVWIDAL 235
           L+D ++SR+ + WG +IP    DD  +                        ++  W  + 
Sbjct: 399 LRDWNISRQLW-WGHRIPVFYCDDCGWQDALMEDTDVCPKCGGHHVHQDEDVLDTWFSSQ 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----V 290
                T G+ ++PD  +    P  + V  +DI+      W A ++ ++L   K+     V
Sbjct: 458 LWTFATQGWPNHPDQLEGHH-PTQVLVTARDIIAL----WVARMIMSSLYFTKEIPFHDV 512

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DGL 346
           + +  IL K G ++SKS GN +DP+++I + G DA+RY L+  I   +D  +D       
Sbjct: 513 YIYATILAKDGSRMSKSKGNGVDPMDLIAKYGADAMRYNLLTLITNNQDVKFDAVLDKKT 572

Query: 347 KKRVNADLANGIGNLV------SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++ V +   +   + V      SR V M L  Y   +P   A T  D  + S  ++V+ E
Sbjct: 573 RELVESPRTDQARSFVTKIWNASRFVQMNLDGYTAGMPK--AETPEDAWMFSRLAKVVAE 630

Query: 401 IRENMQN 407
             E ++ 
Sbjct: 631 TTEQLET 637


>gi|227548727|ref|ZP_03978776.1| valyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079194|gb|EEI17157.1| valyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 901

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 92/235 (39%), Gaps = 50/235 (21%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 408 MHDWTISRQLW-WGHRIPIFYGPNDEVVCVGPDEEPPAGYTQDPD-VLDTWFSSALWPFS 465

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLPKK 289
           T G+ +     +A F+P  + V   DIL            F A   P    + N   P+ 
Sbjct: 466 TMGWPEKTPELEA-FYPTSVLVTAYDILFFWVARMMMFGTFAATQTPELFPAGNNGRPQV 524

Query: 290 VFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            F+    HG +   KG K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D
Sbjct: 525 PFTDLYLHGLVRDEKGRKMSKSLGNGIDPMDWVERFGADALRFALARGANPGVDLPIGED 584

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRV 397
                 NA  A      +  +    L +   + P P     T++D  IL     V
Sbjct: 585 ------NAQSARNFATKLYNATKFALLNGAAVGPLPERAELTDADRWILDRAEEV 633



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 26/170 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI-AKAA 62
           S  +  PN   Q H+GHA +  + D L R  R+ G +VL+  G D  G     K+ AK  
Sbjct: 45  SVVLPPPNVTGQLHMGHALDHTLMDALVRRKRMQGYEVLWLPGMDHAGIATQTKVEAKLK 104

Query: 63  QNAG-----VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +  G     +    FVD+            +   R + D +D S + F  T ++      
Sbjct: 105 EEEGRDRYSLGRDEFVDRVWEWKENYGGAIASQMRAIGDSVDWSRERF--TLDEGLSRAV 162

Query: 107 RILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           + ++K++ D G IY+      W  + + A  + + +YK  +G++ + ++ 
Sbjct: 163 QTIFKQLFDAGLIYRDYRLVNWSPVLETAVSDIEVIYKDVEGEFVSIRYG 212


>gi|294501584|ref|YP_003565284.1| leucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351521|gb|ADE71850.1| leucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 804

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 30  KRKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F + N  NFR     L  SYD    I TT+  ++   + ++ ++  KG  Y
Sbjct: 90  LDTGNDPAEFTELNINNFRRQIKSLGFSYDWEREINTTDPNYYKWTQWIFLQLYKKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV+    + +  +++AY D+LL  
Sbjct: 150 VDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            +    PE I  ++R
Sbjct: 205 LDELDWPESIKEMQR 219



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 38/186 (20%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+  T      D  K K W P D+++ G +    H +Y   W  FL
Sbjct: 491 PQWAGSCWY--YLRYIDPTNSEALADADKLKEWLPVDIYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 LSANLPLPK----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF------ 328
               +   K    K+F+ G IL    EK+SKS GNV++P E++E  G D LR +      
Sbjct: 549 YDIGVVPTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDEIVESHGADTLRLYEMFMGP 608

Query: 329 LVREIACGKDGFYDKDGLKK---RVNADLANGIGNLVSR---------------SVSMIL 370
           L   IA    G    DG ++   RV   L +  G L S+               +V  + 
Sbjct: 609 LDASIAWSTKGL---DGARRFLDRVWRLLVDDNGELSSKVQESNDTTLERVYHQTVKKVT 665

Query: 371 KDYDGM 376
           +DY+G+
Sbjct: 666 EDYEGL 671


>gi|290991765|ref|XP_002678505.1| predicted protein [Naegleria gruberi]
 gi|284092118|gb|EFC45761.1| predicted protein [Naegleria gruberi]
          Length = 1020

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 129/270 (47%), Gaps = 42/270 (15%)

Query: 179 YYESHP-EFILPIERRNEVISFV-KSGL-------KDLSLSRKTFDWGIKIPDDPQYIMY 229
           Y E++P E++   E    VIS V K G        +D  LS +  + G K   D    + 
Sbjct: 552 YKENNPSEYLATSESIEHVISLVEKHGTDCWFEMSEDQLLSPQYRNQGWKKGTD---TLD 608

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----NLP 285
           VW D+ T +         P        PAD+++ G D    H  ++ + LL++     +P
Sbjct: 609 VWFDSGTTWFGVVKASGIP-------LPADVYLEGSDQ---HRGWFQSSLLTSLAYQGVP 658

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             KK+ +HGF+    G+K+SKS+GN I+P  +I + GVD LR ++       +++ GK+ 
Sbjct: 659 PYKKIVTHGFVTDEAGKKMSKSIGNTIEPESIISKQGVDVLRLWVSHSDFSVDVSIGKN- 717

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVL 398
                 + ++V+ +L   I N  ++ +  +L++YD  +P +     E D  I++   +  
Sbjct: 718 ------VIEKVSTNLKK-IRN-TAKFMLGVLENYDPNLPVSKEQLVEVDYYIINRVKQFC 769

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            +I E+ +N   ++    +++   E+  ++
Sbjct: 770 DQITESYENFNYYKVNQLLMTFTYELSSFY 799


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ ++++        P+ S    WPAD+++ G D  R  F +    +  ++   
Sbjct: 539 IMDVWFDSGSSHMGVCK--RRPELS----WPADMYLEGSDQHRGWFQSSLLTSVAVTGKA 592

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  + V +HG++L  +G K+SKSLGNV+ P EVI++ G D +R +
Sbjct: 593 PY-RSVLTHGYVLDGEGRKMSKSLGNVVVPQEVIDQYGADIVRLW 636



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 28/61 (45%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N + H+GHA   ++ D++ ++    G D  +  G D HG  I  A   
Sbjct: 53  KKFVLHDGPPYANGKIHMGHALNKVLKDIIIKYKYAQGYDTPYVPGWDTHGMPIEHACLK 112

Query: 65  A 65
           A
Sbjct: 113 A 113


>gi|161869318|ref|YP_001598485.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161594871|gb|ABX72531.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 914

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 70  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 129

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 130 KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 189

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 190 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 242

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 243 DLDKLEHWPEQVKTMQR 259


>gi|148560314|ref|YP_001259646.1| leucyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371571|gb|ABQ61550.1| leucyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 894

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 50  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 109

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 110 QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 167

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 168 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 222



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 644 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 694

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 695 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 754

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 755 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 799


>gi|126725111|ref|ZP_01740954.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706275|gb|EBA05365.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 1014

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 16/151 (10%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG-IKIPDDPQYIMYVWIDALTNYLTTT 242
           PEF +     N  I   + G   + L    F    I +  DP  ++  W  +    + T 
Sbjct: 546 PEFKIRHTNSNRTI---RVGWDTIELPSGKFKASEIGLCRDPD-VLDTWFSSGLWPIGTL 601

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL 297
           G+ +  D    K++P    + G+DIL F    W A ++   + +  +     V+ HG + 
Sbjct: 602 GWPEQTDALD-KYFPTSTLITGQDILFF----WVARMMMMQIAVVDEIPFDTVYLHGLVR 656

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             KG+K+SKS GNVIDP+++I+E G DALR+
Sbjct: 657 DAKGKKMSKSTGNVIDPLDIIDEFGADALRF 687



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     HIGHA+   + D+L R+ R+ G D L+  GTD  G
Sbjct: 40 SVMIPPPNVTGNLHIGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAG 87


>gi|118591434|ref|ZP_01548832.1| leucyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436106|gb|EAV42749.1| leucyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 873

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 20/188 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
              V  K +  +N    RD   ++ +S D        R   TC +        L+ K  +
Sbjct: 93  QNKVHPKDWTYENIATMRDQLKIMGLSLD------WSREFATCDVAYYTQQQRLFLKFLE 146

Query: 116 KGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            G +Y K     W  +      N+  +    DG+ + +    V+  E   +FF++S Y +
Sbjct: 147 AGLVYRKNAKVNWDPVDMTVLANEQVI----DGRGWRSGAL-VEQRELTQWFFKISDYSE 201

Query: 175 KLLSYYES 182
            LL   ++
Sbjct: 202 DLLEAIDT 209



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 22/180 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I+  G D  R+F++ +    +D  + +DG++         G   
Sbjct: 630 EKMSKSKKNTVDPTDIIDTYGADTARWFMLSDSPPERDVIWTEDGVQ---------GAWR 680

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
            V R   +I    +   P  G   E D   L +     + L  +  +++    +RA+A++
Sbjct: 681 FVQRVWRLIGDIAEKTEPRGGKAPEVDGKALDLRRASHKTLAAVSADLEGLGFNRAVARL 740

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             LV+ + + F+            +  +   Y   E    L  ++   +P LA + +  L
Sbjct: 741 YELVNTISKVFNEG----------EADAGTEYAVREAADYLVQMMAPMMPHLAEECWSAL 790


>gi|313885240|ref|ZP_07818992.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619931|gb|EFR31368.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 929

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ T+Y   L T  YLD         +PADL++ G D  R  F++ +  +  ++
Sbjct: 524 IMDVWFDSGTSYAGVLQTRDYLD---------FPADLYLEGSDQYRGWFNSSFTTSVAVN 574

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  K V S GF++   G K+SKSLGN I P ++ +E+G D +R ++ 
Sbjct: 575 HKPPY-KAVLSQGFVMDGNGMKMSKSLGNTILPADITKELGADIIRLWVA 623



 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 21/145 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-AQNAGVTTKVFV 73
           Y N Q H+GHA   I  D + R+  + G    +  G D HG  I  A  ++  V  K   
Sbjct: 58  YANGQIHMGHALNKITKDFIIRYKSMSGFRSPYVPGWDTHGLPIESALIKSEKVNRK--- 114

Query: 74  DQNSRNFRDMAD-----VLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDK 116
           + ++ +FR + +      ++   +DF+R            T K  ++  ++ ++ K++  
Sbjct: 115 EMSTADFRRLCEEYALKQVEGQKEDFMRLGVAGEWDNPYLTLKPEYEAQQVRIFGKMAAA 174

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEV 141
           G IYKG    ++S   E    + EV
Sbjct: 175 GYIYKGMKPVYWSPSSETSLAEAEV 199


>gi|308189924|ref|YP_003922855.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777133|ref|YP_004136784.1| leucyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624666|gb|ADN68971.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038208|gb|ADV34407.1| Leucyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 780

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 10/191 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI +   YP+   H+GH     I DVLAR++R  G +VL   G D  G     AA   G+
Sbjct: 35  YILSMFPYPSGNIHMGHVRNYAIGDVLARYYRRKGFNVLHPFGWDAFGLPAENAAIKNGI 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             K +  +N +N       L IS+  +    T ++ +    ++++ K+  KG +Y+    
Sbjct: 95  HPKDWTYKNIKNMNPKLKDLGISFAWNYECITADEIYTKWEQLIFIKMWKKGLVYRKKAL 154

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LSYYES 182
             +   D+    +++V    DG+ +   +  VQ  E E Y+ ++  Y ++L   L   ++
Sbjct: 155 LNWCENDQTVLANEQV---EDGKCWRCGNIVVQ-KEMEQYYLKIRNYAEELQNDLELLKN 210

Query: 183 H-PEFILPIER 192
           H P+ +L +++
Sbjct: 211 HWPDKVLMMQK 221



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G IL  G K+SKS GNV+ P E+I++   D +R F++
Sbjct: 531 LLTQGMILKDGLKMSKSKGNVVSPDEMIKKYDADTMRLFVL 571


>gi|269303038|gb|ACZ33138.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 820

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  EDKVKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRARGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGD 118
            A   G   KV   +N  NF+     +  SYD+     T++  ++   + L+  + D+G 
Sbjct: 88  YAIRTGTHPKVTTQKNIANFKKQLSAMGFSYDEGREFATSDPDYYHWTQKLFLFLYDQGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y    +  Y        +++EV  G   +G Y      PV+      +  +++AY DKL
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEVENGFSIEGGY------PVERKMLRQWILKITAYADKL 201

Query: 177 L 177
           L
Sbjct: 202 L 202



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 43/167 (25%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFILH----- 298
           K  +W P DL++ G +    H +Y   W      A L   P P KK+ + G +L      
Sbjct: 510 KETYWMPVDLYIGGAEHAVLHLLYSRFWHRVFYDAGLVSTPEPFKKLINQGLVLAFSYRI 569

Query: 299 ----------------------------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                       + EK+SKS  N +DP  +IEE G DALR + +
Sbjct: 570 PGKGYVSIEDVREENGTWISTCGEIVEVRQEKMSKSKLNGVDPQVLIEEYGADALRMYAM 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                 K+  +  +G+         N   +LV+ S    ++D DG++
Sbjct: 630 FSGPLDKNKTWSNEGVGG--CRRFLNRFYDLVTSSEVQDIEDRDGLV 674


>gi|116333699|ref|YP_795226.1| leucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269614|sp|Q03RH7|SYL_LACBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116099046|gb|ABJ64195.1| leucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 809

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    +
Sbjct: 28  QTKPKYYVMDMFPYPSGQGLHVGHPEGYTATDIMARLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F   N +NF+     L  SYD    I TT++ ++   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTAHNIKNFKRQIRSLGFSYDWSREINTTDESYYKWTQWIFEQLYKKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYE 150



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 22/210 (10%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+  T      D  K K+W P DL++ G +    H +Y   W  FL
Sbjct: 496 PQWAGSSWY--FLRYVDPTNDQAIADPEKLKYWMPVDLYIGGAEHAVLHLLYARFWHKFL 553

Query: 280 LSANLPLPKKVF----SHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               +   K+ F    + G IL    EK+SKS GNVI+P E++E+ G D LR + +    
Sbjct: 554 YDLGVVPTKEPFQKLVNQGMILGTNHEKMSKSKGNVINPDEIVEKHGADTLRLYEMFMGP 613

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +G+         NG    + R   +++ D + +         +D ++  + 
Sbjct: 614 LEASKPWSTEGI---------NGSRRWLDRVWRLLIDDNNRLRDRVTMI--NDGALDKIY 662

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ ++ + E+++    + A++Q++  V+E 
Sbjct: 663 NQTVKTVTEDLEAMRFNVAISQLMVFVNEA 692


>gi|51598511|ref|YP_072699.1| leucyl-tRNA synthetase [Borrelia garinii PBi]
 gi|60390682|sp|Q662B4|SYL_BORGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51573082|gb|AAU07107.1| leucyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 840

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  DG       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|313891853|ref|ZP_07825458.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119847|gb|EFR43034.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 823

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 27/203 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     AA 
Sbjct: 32  KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVIARFKKMQGFNVLHPMGYDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N +N       L +SYD D  + T ++ ++   + L++    +G  YK
Sbjct: 92  KNGIAPSKWTYSNIKNMIRQQTELGLSYDWDIDVLTCKEDYYKHTQKLFEVFYKRGLAYK 151

Query: 122 ---------GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                    GC++    L +E   N     K    +    + N  QW      FF+++ Y
Sbjct: 152 KEAKVNWCNGCHT---VLANEQVENG----KCWRCKSIVEKKNLSQW------FFKITDY 198

Query: 173 QDKLLS---YYESHPEFILPIER 192
            ++LL      E  PE +  +++
Sbjct: 199 AERLLKDLDLLEGWPERVKSMQK 221



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 22/188 (11%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K +   G +L  G K+SKS+GNV+ P E++ + G D  R F++      KD  +   G++
Sbjct: 568 KNLLCQGMVLKDGRKMSKSVGNVVSPEEIVSKYGADTARLFILFAAPPEKDLEWSDKGVE 627

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                    G    + R   ++ +  +    +     E+++++     R + ++  ++  
Sbjct: 628 ---------GAYRFLKRVWIIVDRFINLKTESREELNENEKALRRRLHRSIAKVTSDLNG 678

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A++ ++ LV+++  + + +            ++    V  E +R L ILL  FV
Sbjct: 679 KFSFNTAISSIMELVNDMYHFSETE------------STVSESVVNECLRNLLILLAPFV 726

Query: 467 PKLANKIF 474
           P +  +++
Sbjct: 727 PHITEELW 734


>gi|308062828|gb|ADO04716.1| leucyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 806

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLV 330
           GNV+ P E++++ G DA R F++
Sbjct: 578 GNVVSPKEILKKYGADAARLFIL 600


>gi|222085774|ref|YP_002544304.1| valyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|221723222|gb|ACM26378.1| valyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 947

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W A ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I++ G D+LR+ L    A
Sbjct: 564 MKDKNGDPVEPFNTVYVHALVRDKNGQKMSKSKGNVIDPLELIDQYGADSLRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDIMVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|162421444|ref|YP_001606329.1| leucyl-tRNA synthetase [Yersinia pestis Angola]
 gi|238687322|sp|A9R6Z0|SYL_YERPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|162354259|gb|ABX88207.1| leucyl-tRNA synthetase [Yersinia pestis Angola]
          Length = 860

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYAEQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|291287674|ref|YP_003504490.1| isoleucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884834|gb|ADD68534.1| isoleucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 931

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++   +  L+  D      WPA++++ G D  R  FH+    +       
Sbjct: 539 ILDVWFDSGTSH---SAVLEERDELS---WPANMYLEGSDQHRGWFHSSLLESVGSRGVA 592

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K+V +HGF +  KG K+SKSLGN +DP E+I + G + LR ++  E
Sbjct: 593 PY-KEVLTHGFAMDGKGRKMSKSLGNTVDPKEIINKFGAEILRLWVSAE 640


>gi|255307553|ref|ZP_05351724.1| leucyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 806

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA
Sbjct: 31  EKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  Y
Sbjct: 91  IKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K  Y  W     E    +++V +GA           V   + E ++F+ + + ++LL+
Sbjct: 151 KKKSYVNWCP-SCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLN 204



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 99/230 (43%), Gaps = 30/230 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS G
Sbjct: 514 PVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKSKG 572

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N + P+++I+E G D  R F++      +D  + + G+         N +  LV     +
Sbjct: 573 NTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELADV 630

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRY 427
           + KD +      G     D+ +       L+++  ++  +   + A++ ++ L++++ +Y
Sbjct: 631 VKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKY 685

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  EL   N         V  E ++ +  ++  F P L  +++ ++
Sbjct: 686 K------ELDNINE-------AVIKEGVQTIVTIIAPFAPHLGEELWTMI 722


>gi|22125087|ref|NP_668510.1| leucyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440933|ref|NP_992472.1| leucyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51595450|ref|YP_069641.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108808480|ref|YP_652396.1| leucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811259|ref|YP_647026.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599906|ref|YP_001163982.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365489|ref|ZP_01887524.1| leucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153948754|ref|YP_001401888.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165925236|ref|ZP_02221068.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937695|ref|ZP_02226257.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008282|ref|ZP_02229180.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212331|ref|ZP_02238366.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399181|ref|ZP_02304705.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422508|ref|ZP_02314261.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423629|ref|ZP_02315382.1| leucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468416|ref|ZP_02333120.1| leucyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|186894481|ref|YP_001871593.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929691|ref|YP_002347566.1| leucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838156|ref|ZP_04458315.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895948|ref|ZP_04511118.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898733|ref|ZP_04513878.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901496|ref|ZP_04516618.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489682|ref|ZP_06206756.1| leucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294504414|ref|YP_003568476.1| leucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|29427531|sp|Q8ZDF8|SYL_YERPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|60390684|sp|Q66DE3|SYL_YERPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123072690|sp|Q1C521|SYL_YERPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123246629|sp|Q1CKQ4|SYL_YERPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231654|sp|A4TNZ7|SYL_YERPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166980082|sp|A7FKW0|SYL_YERP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238691433|sp|B2K886|SYL_YERPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21957941|gb|AAM84761.1|AE013721_9 leucine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435792|gb|AAS61349.1| leucyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51588732|emb|CAH20343.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108774907|gb|ABG17426.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780393|gb|ABG14451.1| leucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348302|emb|CAL21233.1| leucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211602|gb|ABP41009.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291902|gb|EDM41976.1| leucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152960249|gb|ABS47710.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165914445|gb|EDR33060.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922843|gb|EDR39994.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992664|gb|EDR44965.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206262|gb|EDR50742.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958522|gb|EDR55543.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051685|gb|EDR63093.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057799|gb|EDR67545.1| leucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186697507|gb|ACC88136.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229681425|gb|EEO77519.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688281|gb|EEO80352.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694522|gb|EEO84569.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700871|gb|EEO88900.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362596|gb|ACY59317.1| leucyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262366400|gb|ACY62957.1| leucyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338186|gb|EFA48963.1| leucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354873|gb|ADE65214.1| leucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016187|gb|ADV99758.1| leucyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 860

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYAEQLLNDLD 207

Query: 179 YYESHPEFILPIER----RNEVISFV 200
             ES PE +  ++R    R+E +  V
Sbjct: 208 TLESWPEQVKTMQRNWIGRSEGVDIV 233


>gi|307294118|ref|ZP_07573962.1| valyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880269|gb|EFN11486.1| valyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 899

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 25/266 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP  ++  W  +      T G+ +  + +  + +P DL + G DIL     +W A 
Sbjct: 473 KLTRDPD-VLDTWFSSALWPFGTLGWPEQTE-TLDRHYPNDLLISGFDIL----FFWDAR 526

Query: 279 LLSANLP----LP-KKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +    L     +P +K++ HG +    G+K+SKS GNV+DP+ +I+  G DALR+F+   
Sbjct: 527 MAMQGLEFMGDVPWRKLYLHGLVRAADGQKMSKSKGNVVDPLGLIDRFGADALRFFMAAM 586

Query: 333 IACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            + G+D   D+  ++   N    L N    L S  V+            P A    +  I
Sbjct: 587 ESQGRDVKMDEKRVEGYRNFATKLWNAARFLQSNGVTASTGH-----EAPHAGAPVNRWI 641

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           ++     +Q I   M       A   +   V   D++ D    W ++ T          V
Sbjct: 642 IAETVATVQAIDTAMTELRFDAAANAIYHFV--WDQFCD----WYIELTKGSMDEETKAV 695

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDI 476
                 Q+ ++L  F+P +  +++++
Sbjct: 696 AGWAFDQILVMLHPFMPFITEELWNL 721



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 11/62 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + D++ R+ RL G D L+  GTD           +AG+ T++ V++     
Sbjct: 51  HIGHALDNTLQDIVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQMEAR 99

Query: 81  RD 82
           +D
Sbjct: 100 QD 101


>gi|302834659|ref|XP_002948892.1| hypothetical protein VOLCADRAFT_89222 [Volvox carteri f.
           nagariensis]
 gi|300266083|gb|EFJ50272.1| hypothetical protein VOLCADRAFT_89222 [Volvox carteri f.
           nagariensis]
          Length = 938

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 70/181 (38%), Gaps = 37/181 (20%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D+LAR+ R+ G +VL   G D  G    + A
Sbjct: 122 KPKYYVLDMFPYPSGAGLHVGHPEGYTATDILARYKRMRGFNVLHPMGWDAFGLPAEQYA 181

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G    V   +N   FR     L  SYD    I TT+  ++   R  W+ +S K    
Sbjct: 182 LQTGTHPAVTTQRNVTRFRQQLKALGFSYDWSREISTTDPEYY---RPRWQAVSLKCVSE 238

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +G Y                               PV  M  + +  R++AY ++LLS  
Sbjct: 239 RGGY-------------------------------PVVRMPMKQWMLRITAYAERLLSDL 267

Query: 181 E 181
           E
Sbjct: 268 E 268


>gi|254780445|ref|YP_003064858.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040122|gb|ACT56918.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 963

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 47/269 (17%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +    G   +P  +    WPAD+++ G D  R  F      +     + 
Sbjct: 562 ILDVWFDSACTHTILLG--KDPKLA----WPADVYLEGSDQHRGWFQHSLLESCATRGST 615

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    + +HGF +   GEK+SKS GNV+ P E+I E G D LRY+ V         ++D 
Sbjct: 616 PF-TSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAV------NSDYHDD 668

Query: 344 DGLKKRV---NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             L K +   N D    + N +   + M+  D  G  P+       ++ +L   + + Q 
Sbjct: 669 QRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHD-TGNEPSLADMPALEQLMLHRLTELDQV 727

Query: 401 IRE--------NMQNQLIHRALAQVISLVSEVDRYFDAQK-------PWELKKTNPDRAS 445
           +RE         +  QL + + A++ S       YFD +K       P  LK     R S
Sbjct: 728 VREAYDAFNFKEVVRQLTNFSNAELSSF------YFDIRKDSLYCDSPSSLK-----RLS 776

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++  + + + R L I +   +P  A + +
Sbjct: 777 SIAVIRI-LCRHLIIWIAPILPFTAEEAW 804



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 22/158 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+   +     Y N   HIGHA   I+ DV+ R  ++   +  F  G D HG  I    +
Sbjct: 53  RKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCHGLPIEWKVE 112

Query: 64  NAGV--------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           N  +                    +   +V   S+ F+ +  V D        T E    
Sbjct: 113 NEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQ 172

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               +L  KI++   IY+G     +S+ ++    + E+
Sbjct: 173 IASELL--KIAESDQIYRGIKPIMWSIAEQTTLAEAEI 208


>gi|148558505|ref|YP_001257249.1| isoleucyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148369790|gb|ABQ62662.1| isoleucyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 972

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +    +  
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRSRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|82751346|ref|YP_417087.1| leucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123740972|sp|Q2YTH9|SYL_STAAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82656877|emb|CAI81307.1| leucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 804

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P ++++  G D LR +      L   IA  + G         RV   
Sbjct: 574 NEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  G L S+ V                 T +++S+  V ++ ++++ ++ +    + A
Sbjct: 634 IVNEDGTLSSKIV-----------------TTNNKSLDKVYNQTVKKVTDDFETLGFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 677 ISQLMVFINECYKVDEVYKPY 697



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|300173565|ref|YP_003772731.1| isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887944|emb|CBL91912.1| Isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 930

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D  D      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 526 IMDVWFDSGSSWSGVMNTRDQLD------YPADLYLEGSDQYRGWFNSSLITSVAVTGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF L  KG K+SKSLGN I P++V +++G++ LR + +
Sbjct: 580 PY-KNVLSQGFTLDGKGNKMSKSLGNTISPLDVADKMGIEILRLWTI 625



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQLTKAGHDRKTMPK 117

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIY 120
              RN  +D A + +D   +DF R            T +         ++ +++ KG I+
Sbjct: 118 AEWRNLAKDFALEQVDKQKNDFKRLGIMADWQNPYITLQPEFEAAQLRVFGEMASKGYIF 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGSKPVYWSWSSESALAEAEI 198


>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 924

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLVERDD------LMRPADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E+ G D LR ++ 
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQFGADILRLWVA 621



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 18/156 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  ++G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTKVF----------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
               GV  K                  +D   R F+ +    D  +D+   T +  +   
Sbjct: 105 LAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGD--WDNPYITLKPEYEAQ 162

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              ++ +++ KG IYKG    ++S   E+   + E+
Sbjct: 163 QIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198


>gi|260590994|ref|ZP_05856452.1| valine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536859|gb|EEX19476.1| valine--tRNA ligase [Prevotella veroralis F0319]
          Length = 908

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 29/263 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           M  W  +    ++    ++NPD  +  ++ P    V G DI+ F    W A ++ A    
Sbjct: 487 MDTWFSSWLWPISVFDGINNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEY 542

Query: 284 ---LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     G D 
Sbjct: 543 RGKFPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDI 601

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N        N +  +  ++       I  P A   + E   +    V +
Sbjct: 602 LFDETLCEQGRN------FNNKIWNAFRLVQGWQTADIEQPQASRIAVEWFDAKLKAVNK 655

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----I 455
           E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  VT +      
Sbjct: 656 EMDEQFKSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDKVTYDATLRFF 709

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  +L  F+P +  +++  ++
Sbjct: 710 NSLLKMLHPFMPFITEELWQHIY 732


>gi|308389936|gb|ADO32256.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis
           alpha710]
          Length = 929

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+ +++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|261378296|ref|ZP_05982869.1| isoleucine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145390|gb|EEZ71808.1| isoleucine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 930

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 535 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 647

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 648 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 696

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 697 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 752

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 753 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 789



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|256384445|gb|ACU79015.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385278|gb|ACU79847.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455269|gb|ADH21504.1| leucine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 804

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K YI     YP+    H+GH       DV +RF R+ G DVL   G D  G    + A  
Sbjct: 31  KAYILDMFPYPSGSGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYALK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG----- 117
            G   + F  QN  NF+   + +  S  YD  I T +  ++ T + ++K++  KG     
Sbjct: 91  TGNDPREFTLQNIENFKVQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLAENR 150

Query: 118 DI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           DI    C      L ++     + +     G+Y   +    QW+       +++ Y DKL
Sbjct: 151 DIDVNWCQELGTVLANDEIIEKNGLMVSERGEYPVVKKKMRQWV------LKITDYADKL 204

Query: 177 L 177
           L
Sbjct: 205 L 205



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 12/112 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFL--- 279
           +I Y+  D+  N +  T   D       K+ P DL++ G++    H +Y   W  FL   
Sbjct: 498 FIAYILADSKNNLIDLTS--DEAKKRLEKWLPVDLYIGGQEHAVGHLLYARFWTHFLYDL 555

Query: 280 --LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             L  N P  K++F+ G IL     K+SKS GNVI+P +VI+  G DALR +
Sbjct: 556 GLLPTNEPF-KRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHGADALRLY 606


>gi|161619727|ref|YP_001593614.1| leucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260568878|ref|ZP_05839346.1| leucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|189082985|sp|A9M845|SYL_BRUC2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161336538|gb|ABX62843.1| leucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260154262|gb|EEW89344.1| leucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 877

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADIARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|78065216|ref|YP_367985.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123729057|sp|Q39JM5|SYL_BURS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77965961|gb|ABB07341.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 864

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|15618077|ref|NP_224361.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835688|ref|NP_300212.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752890|ref|NP_445160.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241489|ref|NP_876430.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6919982|sp|Q9Z930|SYL_CHLPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4376420|gb|AAD18306.1| Leucyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189530|gb|AAF38433.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978526|dbj|BAA98363.1| leucyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33235997|gb|AAP98087.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 820

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  EDKVKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRARGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGD 118
            A   G   KV   +N  NF+     +  SYD+     T++  ++   + L+  + D+G 
Sbjct: 88  YAIRTGTHPKVTTQKNIANFKKQLSAMGFSYDEGREFATSDPDYYHWTQKLFLFLYDQGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y    +  Y        +++EV  G   +G Y      PV+      +  +++AY DKL
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEVENGFSIEGGY------PVERKMLRQWILKITAYADKL 201

Query: 177 L 177
           L
Sbjct: 202 L 202



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 43/167 (25%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFILH----- 298
           K  +W P DL++ G +    H +Y   W      A L   P P KK+ + G +L      
Sbjct: 510 KESYWMPVDLYIGGAEHAVLHLLYSRFWHRVFYDAGLVSTPEPFKKLINQGLVLASSYRI 569

Query: 299 ----------------------------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                       + EK+SKS  N +DP  +IEE G DALR + +
Sbjct: 570 PGKGYVSIEDVREENGTWISTCGEIVEVRQEKMSKSKLNGVDPQVLIEEYGADALRMYAM 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                 K+  +  +G+         N   +LV+ S    ++D DG++
Sbjct: 630 FSGPLDKNKTWSNEGVGG--CRRFLNRFYDLVTSSEVQDIEDRDGLV 674


>gi|58698342|ref|ZP_00373257.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630139|ref|YP_002726930.1| Isoleucyl-tRNA synthetase, class Ia [Wolbachia sp. wRi]
 gi|58535132|gb|EAL59216.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592120|gb|ACN95139.1| Isoleucyl-tRNA synthetase, class Ia [Wolbachia sp. wRi]
          Length = 1103

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLG 308
           K W      I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L 
Sbjct: 585 KEWFESADFITEYIAQTRGWFYTLFVLSTALFDREPF-KNCICHGVVLDVKGQKLSKRLN 643

Query: 309 NVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKR-VNADLANGIGNLVSRSV 366
           N  DP+EV +  G DALR+ ++   I CG +   DK+G   R V  ++   I N  S   
Sbjct: 644 NYADPMEVFDRYGSDALRFLMLSGSIVCGGNLLLDKEGNSIRDVLKNVIKPIWN--SYHF 701

Query: 367 SMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +  + DG+        +S  D  ++S C   ++ I+ +M N     A   +++    +
Sbjct: 702 FTMYANADGIKAEVCKDYQSTIDRYMISKCFEAVEGIQASMNNYNSQEACKILMNFFEVL 761

Query: 425 DRYFDAQKPWELKKTNPDRAST----VLY-VTVEVIRQLAILL 462
           + ++  +      K++ D+  T    VLY V   ++R  A LL
Sbjct: 762 NNWYIRRSRERFWKSDLDQDKTDAYNVLYTVFYYILRAAAPLL 804


>gi|34763705|ref|ZP_00144628.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886533|gb|EAA23774.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 933

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LKDL L ++T             IM VW D+ +++    G L+   G +    PA
Sbjct: 519 LVKYNLKDLKLRKET------------NIMDVWFDSGSSH---RGVLEVWKGLRR---PA 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGRKMSKSLGNTVSPAD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  +KA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVSKAREMSALEIRQLCEKYARKW------VGIQKEQFIRLGVLGDWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I + G I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203


>gi|325283140|ref|YP_004255681.1| leucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314949|gb|ADY26064.1| leucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 819

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 12/183 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF  G D  G     AA  
Sbjct: 42  EKHYALTMFPYPSGNLHIGHWYANVAPDAHARWMRMRGHNVLFPMGFDSFGLPAENAAIK 101

Query: 65  AGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            GV  + +   N       F  M  ++D  +     T++  ++   +  + +   +G  Y
Sbjct: 102 RGVNPRSWTYDNIAHMKGQFGRMGTMID--WTRSFATSDPEYYRWNQWFFTQFFKRGLAY 159

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            KG    W   +D+    +++V  GA          PV+      ++ +++ Y D+LL +
Sbjct: 160 KKGGLVNWCP-KDQTVLANEQVVGGA----CERCGTPVERRNLSQWYLKITDYADELLDF 214

Query: 180 YES 182
            ++
Sbjct: 215 SDT 217



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIY---WPAF-----LLSANLPLPKKVFSHGFILHK- 299
           D ++    P DL+  G +    H +Y   W        L   N P  ++V + G +L + 
Sbjct: 525 DPAQRGLMPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTDQNEPF-RRVRNQGMVLGED 583

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GEK+SKS GNV+DP +++ E G D +R +L+        G +D  G+
Sbjct: 584 GEKMSKSRGNVVDPDDLVAEYGADTVRTYLMFIAPWELGGPWDTKGI 630


>gi|253578857|ref|ZP_04856128.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849800|gb|EES77759.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 800

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 27/185 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK- 299
           D  K K+W P D +  G + +  H IY   W  FL      N P P  K    G IL   
Sbjct: 517 DMDKLKYWMPVDWYNGGMEHVTRHMIYSRFWHHFLYDLGVVNTPEPYAKRSIQGLILGPD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP++++EE G D LR +++         F    G     + +   G  
Sbjct: 577 GDKMSKSKGNVVDPLDIVEEYGADTLRTYVL---------FMGDYGAATPWSENSVKGCK 627

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R          G+       + SDE  + +  R ++++  +++N   + A+A +++
Sbjct: 628 KFLDRVA--------GLTDILSEESVSDELEMKL-HRTIKKVSSDIENLKFNTAIASLMT 678

Query: 420 LVSEV 424
           L++E+
Sbjct: 679 LINEI 683



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       +V++R  R++G +VLF  G D  G      
Sbjct: 29  DKPKFYGLVEFPYPSGAGMHVGHIKAYSSLEVISRKRRMEGYNVLFPIGFDAFGLPTENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  D+N + F +    +  S+D    I TT++ ++   + ++ K+ +KG +
Sbjct: 89  AVKTGTHPRIITDENIKRFSNQLKKVGFSFDWNRVIDTTDEDYYKWTQWIFLKMFEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           ++      Y    +   ++++    + G   +  H+ V    ++ ++ R++ Y DKLL
Sbjct: 149 FRDRTLVNYCPHCKVVLSNED----SQGGKCDICHSDVVQKSKDVWYLRITQYADKLL 202


>gi|227823849|ref|YP_002827822.1| leucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254782510|sp|C3MB60|SYL_RHISN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|227342851|gb|ACP27069.1| leucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 876

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV    +  QN    +    V+ +S D   +F  T +  ++   + L+    +KG +Y
Sbjct: 93  ERGVHPAGWTYQNIAAMKAQLKVMGLSLDWSREFA-TCDPAYYQRQQYLFLDFLEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      +   D     +++V    DG+ + +    V+  E   +FFR++ +   LL
Sbjct: 152 RRQSKVNWDPVDNTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFRITDFSQDLL 204



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++       D   D+D +      + A+    
Sbjct: 631 EKMSKSKKNVVDPDDIIGSYGADTARFFVL------SDSPPDRDVIWSEAGVEGAHRFVQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R V    +   G   +P    E   +I     R L+ +  +      ++A+A++  L
Sbjct: 685 RVWRLVGEAAESLRGAKASPAKEGEG-LAISQAAHRTLRAVEADYDKLAFNKAVARIYEL 743

Query: 421 VS 422
           V+
Sbjct: 744 VN 745


>gi|217967477|ref|YP_002352983.1| valyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336576|gb|ACK42369.1| valyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 881

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/361 (20%), Positives = 149/361 (41%), Gaps = 47/361 (13%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P++ +  E +F R+       +   E      +P +R  +V       +KD  LSR+ +
Sbjct: 351 TPIEPLISEQWFMRMENLAKPAIEVVEKGEVKFIP-DRWKKVYFDWMYNIKDWCLSRQLW 409

Query: 215 DWGIKIP--------------DDPQY--------------IMYVWIDALTNYLTTTGYLD 246
            WG +IP                P+               ++  W  +    L T G+ +
Sbjct: 410 -WGHRIPAWYCENCGHVNVEEQKPEKCERCGSENLRQDEDVLDTWFSSALWPLGTLGWPE 468

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHK-G 300
           + +     F+P  +    +DI+      W A ++   L   K+V     + H  +L + G
Sbjct: 469 DTEDLNY-FYPTSVLSTARDIINL----WVARMIMMGLEFRKEVPFYYVYVHPTVLTREG 523

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +++SKS G  +DP+E+I + G D  R+ L  +    +D  + ++  +   N    N I N
Sbjct: 524 KRMSKSKGTGVDPLELINKYGADVTRFGLAIQCTEMQDLRFHEENFENTKN--FTNKIWN 581

Query: 361 LVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                +S +    DY+ +  T  + + SD+ ILS   + + E+ ++++N      +  + 
Sbjct: 582 AARFVISNLDFNIDYNEVDLTKHSLSLSDKWILSRLQKTVYEVTDHLENFRFSEYVKTIY 641

Query: 419 SLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +   SE  D Y +  KP      +P+       +  +V+++   LL   +P +  +I+  
Sbjct: 642 TFFWSEFCDWYIELSKPRLSNTEDPESRLIAQVILWKVLKESMQLLHPVMPFITEEIWQK 701

Query: 477 L 477
           L
Sbjct: 702 L 702



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 13/75 (17%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          +R K   S  +  PN     H+GHA    I D+L R+ R+ G + L+  GTD        
Sbjct: 33 DRSKKNYSIVLPPPNITGSLHMGHALNATIQDILIRWRRMQGFNALWIPGTD-------- 84

Query: 61 AAQNAGVTTKVFVDQ 75
             +AG+ T++ V++
Sbjct: 85 ---HAGIATQMVVER 96


>gi|170731974|ref|YP_001763921.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254246337|ref|ZP_04939658.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688589|sp|B1JVG9|SYL_BURCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124871113|gb|EAY62829.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169815216|gb|ACA89799.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 864

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|325133568|gb|EGC56230.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325206749|gb|ADZ02202.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 929

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|170701657|ref|ZP_02892600.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133446|gb|EDT01831.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 864

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204

Query: 179 YYES 182
             E 
Sbjct: 205 DLEG 208


>gi|171184685|ref|YP_001793604.1| leucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558039|sp|B1YAS9|SYL_THENV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|170933897|gb|ACB39158.1| leucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 945

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 31/254 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    GKD++  H  ++  F   A  P    P+++ ++G++L +GEK+SKS  NV+
Sbjct: 589 WYPLDSRNSGKDLIPNHLTFF-IFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVL 647

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                +E  G D LR  L       +D  F D +    R NA     I  L  R V    
Sbjct: 648 PLDRAVEMYGPDPLRATLALAAEVEQDLDFRDAEA---RRNAQQLMSIYTLAQRLVQ--- 701

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFD 429
               G    P  +   D+ +++  SRVL+  RE  +   + +A  +V+     V D+Y  
Sbjct: 702 ----GAEERPPTWV--DQWLVAEISRVLERAREAYEKVRVRQAAVEVLYNAKAVFDQYLA 755

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +        P R +      VE  +  A+ ++  VP LA +++  L  A         
Sbjct: 756 MVE-------KPSRQA------VEAAKAWAVAMEPLVPHLAEELWATLGGAGFAALAPWP 802

Query: 490 DQRLKPGFMLHKTF 503
             R +P  +L K +
Sbjct: 803 KLRAEPAALLAKRY 816



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 35/70 (50%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+ A  YPN   HIGH    ++ADV+ARF R  G  VLF  G    G  I   A+  
Sbjct: 35  KYFITAAYPYPNGAIHIGHGRTYLVADVMARFQRHLGRSVLFPMGFHYTGTPILTIAEVI 94

Query: 66  GVTTKVFVDQ 75
               K  +++
Sbjct: 95  AAGDKAVMEE 104


>gi|149185343|ref|ZP_01863660.1| isoleucyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831454|gb|EDL49888.1| isoleucyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 968

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           I+ VW D+   +  T      PD    + WPADL++ G D    H  ++ + LL ++   
Sbjct: 591 ILDVWFDSGCTHAFTLEGGRWPD----QRWPADLYLEGSDQ---HRGWFQSSLLESSATR 643

Query: 287 PKK----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +     V +HGF +   G+K+SKSLGN IDP++V+E+ G D +R +
Sbjct: 644 GRAPYDAVLTHGFTMASDGKKMSKSLGNTIDPLKVMEQYGADIIRLW 690



 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+REK  +     Y N   HIGHA   I+ D++ R   L G D  F  G D HG  I
Sbjct: 53  KDREKFILHDGPPYANGDMHIGHALNRILKDMVVRSQTLLGKDAPFVPGWDCHGLPI 109


>gi|88607061|ref|YP_505129.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598124|gb|ABD43594.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 837

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E    Y+ +   YP+   H+GH    +I DV+ARF R  G  VL   G D  G     AA
Sbjct: 35  ENINCYVLSMFPYPSGNIHMGHIRNYVIGDVIARFKRAKGFSVLHPIGWDSFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            + G+  +++   N  + R     + ISY+
Sbjct: 95  LSYGINPELWTRNNIDSMRTQLKAIGISYN 124



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 31/204 (15%)

Query: 281 SANLPLPK---KVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           S N   PK   K+ + G  + +G  EK+SKS  NV+DP E++++ G D +R F++ +   
Sbjct: 575 SGNYLFPKDAEKMAAEGKKVLQGKVEKMSKSKKNVVDPSEILKQYGADTVRLFMLSDTPP 634

Query: 336 GKDGFYDKDGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            +D  +   G++   R    L   +G+  S S     ++  G           D   LS 
Sbjct: 635 ERDIEWTDCGVEGAWRYLERLWKVLGSNTSISTEFNNENVSG----------KDLEFLSK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++L  I  ++++  ++ A+A+   + + V         +E+ K +   +     V  E
Sbjct: 685 VHKLLNGIEGDIEHCRLNCAVAKFREMSNIV---------FEMMKCSASNS-----VINE 730

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L  +++ F+P L  K+++I+
Sbjct: 731 SVCILLRVMEPFIPHLTAKLWEII 754


>gi|82700587|ref|YP_415161.1| leucyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024884|ref|YP_001935652.1| Aminoacyl-tRNA synthetase, class I [Brucella abortus S19]
 gi|237816173|ref|ZP_04595168.1| leucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260547092|ref|ZP_05822830.1| aminoacyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|123740877|sp|Q2YLH9|SYL_BRUA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238689396|sp|B2S7N1|SYL_BRUA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82616688|emb|CAJ11771.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Leucyl-tRNA synthetase bacterial/mitochondrial, class
           Ia [Brucella melitensis biovar Abortus 2308]
 gi|189020456|gb|ACD73178.1| Aminoacyl-tRNA synthetase, class I [Brucella abortus S19]
 gi|237788635|gb|EEP62848.1| leucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260095457|gb|EEW79335.1| aminoacyl-tRNA synthetase [Brucella abortus NCTC 8038]
          Length = 877

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMI------LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            V R   ++      LKD      T G      +++      V  +I +   N+ + R  
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAVHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
             V +L   + +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|121606674|ref|YP_984003.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166231627|sp|A1VTV4|SYL_POLNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120595643|gb|ABM39082.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 888

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I D+L+R+ R+ G +VL   G D  G     AA 
Sbjct: 32  RKKYYACSMLPYPSGKLHMGHVRNYTINDMLSRYLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N    +     + ++ D    I T +  ++   + L+ K+ +KG  Y+
Sbjct: 92  KNGVPPAQWTYDNIAYMKKQMQAMGLAVDWSREIATCDPSYYKWNQWLFLKMLEKGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D+    +++V    DG+ +      V+  E  GY+ +++ Y ++LL 
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGKGWRTGAT-VEKREIPGYYLKITDYAEELLG 204


>gi|323702369|ref|ZP_08114034.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532675|gb|EGB22549.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 827

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 8/178 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y      YP+ + H+GH     I DV+ARF  + G  VL   G D  G     AA
Sbjct: 31  DRPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKNMQGYHVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N  + R     L +SYD    + T    ++   + L+ ++  +G  Y
Sbjct: 91  IKNGIPPATWTWDNIAHMRSQLKQLGLSYDWQREVATCHPEYYKWGQWLFLQLYKRGLCY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K      W         N+  V  G +          V+  E + +FFR++ Y  +LL
Sbjct: 151 KKHARVNWCPDCATVLANEQVVEGGCE-----RCGATVEQRELDQWFFRITDYAQRLL 203



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 38/265 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF----- 278
           M  ++D+   YL  T   D     D  KA  W   D ++ G +    H +Y   F     
Sbjct: 496 MDTFVDSSWYYLRYTSPRDTEQAWDKQKANHWMSVDQYIGGVEHAILHLLYSRFFTKVFY 555

Query: 279 ---LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+    P  K + + G +L  G K+SKS GNV+ P E+++  G D  R F++     
Sbjct: 556 DLGLVDVQEPF-KNLLTQGMVLKDGAKMSKSKGNVVSPEEIVDRYGADTARLFILFAAPP 614

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESI 390
            +D  +   G++         G    ++R   ++    D +   P       F    + +
Sbjct: 615 ERDLEWSDRGVE---------GSHRFLNRVWRLVYSVKDEVAAAPAIDPKANFVGVHKEM 665

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
             +    ++++ E++  +   + A++ ++ LV+ +  Y D       K    +R S+VL 
Sbjct: 666 RRLTHYAIKKVTEDVSGRFNFNTAISTIMELVNGIYTYRD-------KVAAVERNSSVL- 717

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
              E I  + ILL  F P ++ +++
Sbjct: 718 --AEAINSMIILLAPFAPHISEELW 740


>gi|322373832|ref|ZP_08048367.1| leucine--tRNA ligase [Streptococcus sp. C150]
 gi|321277204|gb|EFX54274.1| leucine--tRNA ligase [Streptococcus sp. C150]
          Length = 833

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAKVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|320334398|ref|YP_004171109.1| leucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755687|gb|ADV67444.1| leucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 821

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  T   YP+   HIGH Y  ++ D  AR+ R+ G +VLF  G D  G     AA 
Sbjct: 40  KQKHYALTMFPYPSGNLHIGHWYAYVVPDARARWMRMRGYNVLFPMGFDAFGLPAENAAI 99

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+  + +   N    +  FR M  ++D S      T +  ++   +  + ++ ++G  
Sbjct: 100 KRGINPRTWTLDNIQYMTGQFRRMGTMIDWSRQ--FATCQPEYYRWNQWFFTRMFERGLA 157

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  W  + D+    +++V  G  G+   A    V+      + F+++ Y ++LL 
Sbjct: 158 YKKESFVNWDPV-DQTVLANEQVVDGR-GERSGAL---VERRLMSQWHFKITEYAEELLD 212

Query: 179 Y 179
           +
Sbjct: 213 F 213



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 8/82 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG-EKISKSLG 308
           P DL+  G +    H +Y   W        L++N    + + + G IL +  EK+SKS G
Sbjct: 534 PIDLYTGGIEHAILHLLYSRFWTKVARDLGLTSNSEPFRALRNQGIILGEDQEKMSKSRG 593

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NVIDP ++++E G D +R +L+
Sbjct: 594 NVIDPDDLVQEYGADTVRTYLM 615


>gi|299065703|emb|CBJ36877.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum CMR15]
          Length = 883

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPIDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITEYAQELLS 210


>gi|225850337|ref|YP_002730571.1| leucyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646026|gb|ACO04212.1| leucyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 608

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y+     YP+ + H+GH     I DV+ R+ R+ G + L   G D  G     AA
Sbjct: 31  DKDKFYVLEMFPYPSGRIHMGHVRNYAIGDVVNRYLRMKGKNTLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +GV    +  +N    +     L  SYD    + T    ++   + ++ K+ +KG  Y
Sbjct: 91  IKSGVHPAKWTYENIDYMKKELKRLGFSYDWNREVTTCSPEYYRWNQWIFLKMYEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V +G   +       PV   E   +F R++ Y + LL   
Sbjct: 151 RKSAVVNWCPHDMTVLANEQVIEGRCWRC----DTPVVQKEIPSWFLRITDYAEVLLDDL 206

Query: 181 ES----HPEFILPIER 192
           E+     PE +L +++
Sbjct: 207 ETLKGKWPEAVLTMQK 222


>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 933

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LKDL L ++T             IM VW D+ +++    G L+   G +    PA
Sbjct: 519 LVKYNLKDLKLRKET------------NIMDVWFDSGSSH---RGVLEVWKGLRR---PA 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGRKMSKSLGNTVSPAD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  AKA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVAKAREMSALEIRQLCEKYARKW------VGIQKEQFIRLGVLGDWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I + G I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203


>gi|238022875|ref|ZP_04603301.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
 gi|237865683|gb|EEP66821.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
          Length = 927

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 44/284 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +         WPADL++ G D  R  F +    
Sbjct: 528 KLPD----TMDVWFDSGSTHYSVLKQREE------LAWPADLYLEGSDQHRGWFQSSMLT 577

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                   P  K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 578 GCAAFGRAPY-KQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAATDYS 636

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESIL 391
           G D    K+ LK+   +         +  +++ +  +     P   A  ++D    +   
Sbjct: 637 G-DLAISKEILKRVTESY------RRIRNTLAFLFANLSDFNPIEDAVPQADMVEIDRYA 689

Query: 392 SVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKT 439
            V +R LQE    E+      H A+ +++   SE           DR +  +     +++
Sbjct: 690 LVLARQLQEKLAGEHYPRYAFHFAVQELVQFCSEDLGAFYLDILKDRLYTTKTNSHARRS 749

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               A T LY    + R L +L+   +   A + +DI+   +E+
Sbjct: 750 ----AQTALY---HITRSLVLLMSPILCFTAEEAWDIIGGGEED 786



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|170045615|ref|XP_001850398.1| valyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167868586|gb|EDS31969.1| valyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 984

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 56/283 (19%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP  ++  W  +     +T G+  N    +++F+P DL   G DIL     +W A 
Sbjct: 499 EITQDPD-VLDTWFSSSLLPFSTLGWPTN----QSRFYPLDLMETGHDIL----FFWVAR 549

Query: 279 L------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +      L+  LP PK +  HG +  + G K+SKSLGNVI P +VI  + +D L     R
Sbjct: 550 MVMLGQQLTNQLPFPK-ILLHGIVCDEYGRKMSKSLGNVIKPDQVIRGISLDDLN----R 604

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           E                   A L++  G L +  +   L     M P       +D    
Sbjct: 605 E-------------------AQLSHAQGVLSASELKKSLAGQRRMFPKGIPECGTDALRF 645

Query: 392 SVCSRVLQ------EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           ++CS  ++       ++E   N+L    + Q     +     F A    EL+  + DR +
Sbjct: 646 TLCSANVKNHFINFNVQECHTNKLFFNKIWQATRYTAGCVEKFGAGGKGELRTEDRDRLT 705

Query: 446 TV-------LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +       L  T+E   Q    L+++   LA   +   F ++
Sbjct: 706 EMDRWIVSRLGNTIETFEQ---ALESYNFHLATAAWKTFFYSN 745


>gi|328869564|gb|EGG17942.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1082

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 15/227 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +PA  H I + I +    ++   +LS  L   P  + +  +G +L   G+K+SK L N
Sbjct: 572 KIFPA--HFIAEGIDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLASDGKKMSKRLKN 629

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRS 365
             DP+ VI++ G DALR +L+       +   + ++G+K   K V     N    +V  +
Sbjct: 630 YPDPVTVIDKFGSDALRLYLISSPVVRAETLKFQENGVKDMLKDVFLPWFNAYRFMVQNA 689

Query: 366 VSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                      +PT      S    D  +L+ C  +++ +RE M    ++  + ++   +
Sbjct: 690 HRHEAATGSKFVPTLEVALASTNIMDRWVLASCQSLIKFVREEMAAYRLYTVVPRLTLFI 749

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVP 467
           +E+  ++        K  N  D A T L +  EV+ ++ + +  F P
Sbjct: 750 NELTNWYVRLNRRRFKGANGEDDAKTSLNILFEVLLKVCVAMGPFTP 796


>gi|296877210|ref|ZP_06901250.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431730|gb|EFH17537.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 833

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|126700138|ref|YP_001089035.1| leucyl-tRNA synthetase [Clostridium difficile 630]
 gi|255093504|ref|ZP_05322982.1| leucyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315246|ref|ZP_05356829.1| leucyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255517915|ref|ZP_05385591.1| leucyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651031|ref|ZP_05397933.1| leucyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|255656504|ref|ZP_05401913.1| leucyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|260684098|ref|YP_003215383.1| leucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687757|ref|YP_003218891.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296450048|ref|ZP_06891810.1| leucyl-tRNA synthetase [Clostridium difficile NAP08]
 gi|296878429|ref|ZP_06902435.1| leucyl-tRNA synthetase [Clostridium difficile NAP07]
 gi|306520893|ref|ZP_07407240.1| leucyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123173953|sp|Q182K8|SYL_CLOD6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115251575|emb|CAJ69408.1| Leucyl-tRNA synthetase [Clostridium difficile]
 gi|260210261|emb|CBA64530.1| leucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213774|emb|CBE05712.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296261056|gb|EFH07889.1| leucyl-tRNA synthetase [Clostridium difficile NAP08]
 gi|296430513|gb|EFH16354.1| leucyl-tRNA synthetase [Clostridium difficile NAP07]
          Length = 806

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA
Sbjct: 31  EKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  Y
Sbjct: 91  IKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K  Y  W     E    +++V +GA           V   + E ++F+ + + ++LL+
Sbjct: 151 KKKSYVNWCP-SCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLN 204



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 99/230 (43%), Gaps = 30/230 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS G
Sbjct: 514 PVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKSKG 572

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N + P+++I+E G D  R F++      +D  + + G+         N +  LV     +
Sbjct: 573 NTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELADV 630

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRY 427
           + KD +      G     D+ +       L+++  ++  +   + A++ ++ L++++ +Y
Sbjct: 631 VKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKY 685

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  EL   N         V  E ++ +  ++  F P L  +++ ++
Sbjct: 686 K------ELDNINE-------AVIKEGVQTIVTIIAPFAPHLGEELWTMI 722


>gi|23502660|ref|NP_698787.1| leucyl-tRNA synthetase [Brucella suis 1330]
 gi|32171564|sp|Q8FYQ7|SYL_BRUSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|23348668|gb|AAN30702.1| leucyl-tRNA synthetase [Brucella suis 1330]
          Length = 877

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADIARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|117925437|ref|YP_866054.1| isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609193|gb|ABK44648.1| Isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 954

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 22/168 (13%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPADL++ G D  R  FH+    +       P  K V +HGF++  KG K+SKS GNVI 
Sbjct: 572 WPADLYLEGSDQHRGWFHSSLLASVGTRDRAPY-KAVLTHGFVVDGKGHKMSKSRGNVIA 630

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--- 369
           P +VI++ G D LR ++  E   G            R++ ++  G+ +   R  + I   
Sbjct: 631 PEKVIKQYGADILRMWVSAEDYAG----------DIRISDEILKGLSDAYRRIRNTIRYL 680

Query: 370 ---LKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              L  +D    T   G   E D   L   +R+++++ +   +   HR
Sbjct: 681 ISNLSGFDAAEHTVPYGQLLELDRWALDRVARLIRDVEKAYTDYTFHR 728



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           Y N   H+GHA   ++ D++ +  ++ G+D ++  G D HG  I   A+ 
Sbjct: 58  YANGHLHMGHAINKVLKDIICKSRQMQGMDAVYVPGWDCHGLPIELKAEQ 107


>gi|326403384|ref|YP_004283465.1| isoleucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050245|dbj|BAJ80583.1| isoleucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 942

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  F A    A       P  K + + GF+L  +G K+SKSLGNV  
Sbjct: 566 WPADLYLEGSDQHRGWFQASLLEAVGTRGTAPF-KAIVTDGFVLDEQGRKMSKSLGNVTA 624

Query: 313 PIEVIEEVGVDALRYFLV-----REIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           P +VI++ G D LR +++      ++  GKD    +  L +R+   L   +G L
Sbjct: 625 PQQVIDQYGADILRLWVMNSDIHNDLRIGKDILKQQADLYRRIRNTLRWVLGGL 678



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT- 69
           Y N   HIGHA   I  D++ R  ++ G D  +  G D HG     K+ +  + AG    
Sbjct: 66  YANGNLHIGHALNKIHKDLINRARQMAGFDANYVPGWDCHGLPIEWKVEEGYRKAGKNKD 125

Query: 70  KVFVDQNSRNFRDMAD-VLDISYDDFIR 96
           +V + +  R  RD A   LD+  ++F R
Sbjct: 126 EVPILEFRRECRDYAQHWLDVQAEEFKR 153


>gi|325267260|ref|ZP_08133922.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981197|gb|EGC16847.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 941

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 46/285 (16%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     M VW D+ + + +       P+ +    WPADL++ G D    H  ++ + 
Sbjct: 542 KLPD----TMDVWFDSGSTHFSVLK--QRPELA----WPADLYLEGSDQ---HRGWFQSS 588

Query: 279 LLSANLPLP----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +L+    L     K++ +HGF++   G K+SKSLGNVI P  V  E G D LR +     
Sbjct: 589 MLTGCATLGRAPYKQLLTHGFVVDGNGRKMSKSLGNVIAPQAVYNEFGADILRLWTANTD 648

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESI 390
             G+    ++  + KRV  ++   I N +S   +  LKD+D +   +P      E D   
Sbjct: 649 YSGELSISNE--ILKRVT-EMYRRIRNTLSFLFAN-LKDFDRIEDAVPL-ADMVEIDRYA 703

Query: 391 LSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKK 438
           L V +R LQE    E       H A+  ++   SE           DR +  Q     ++
Sbjct: 704 L-VLARRLQEKLAGEYYPRYAFHFAVQDLVQFCSEDLGSFYLDILKDRLYTTQADSHARR 762

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +    A T LY    + R L +L+   +   A + ++++   +E+
Sbjct: 763 S----AQTALY---HITRSLVLLMSPVLCFTAEEAWELIGGGEED 800



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 63/165 (38%), Gaps = 20/165 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I     
Sbjct: 61  RPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPIEVMIE 120

Query: 60  -------KAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-YDDFIRTTE-KRHHDTCRILW 110
                   A +   +  +   +Q +R   D   +  +  +D   RT + K   DT R L 
Sbjct: 121 KLHGRDMPANKFRELCREYAAEQIARQKTDFVRLGVMGDWDKPYRTMDFKTEADTVRTL- 179

Query: 111 KKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKGADGQY 149
            +I   G +Y+G      C     SL +      D+V    D QY
Sbjct: 180 GEIYKAGYLYRGSKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVQY 224


>gi|254719795|ref|ZP_05181606.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984814|ref|ZP_06097549.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|264663406|gb|EEZ33667.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
          Length = 877

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 22/185 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAYQ 173
             K     W  + +    N+  V    DG+ + +     Q    QW      FF+++ + 
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGALVEQRELTQW------FFKITDFS 200

Query: 174 DKLLS 178
           ++LL+
Sbjct: 201 EELLA 205



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   +I +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLIAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|255101684|ref|ZP_05330661.1| leucyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 806

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA
Sbjct: 31  EKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  Y
Sbjct: 91  IKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K  Y  W     E    +++V +GA           V   + E ++F+ + + ++LL+
Sbjct: 151 KKKSYVNWCP-SCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLN 204



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 99/230 (43%), Gaps = 30/230 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS G
Sbjct: 514 PVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKSKG 572

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N + P+++I+E G D  R F++      +D  + + G+         N +  LV     +
Sbjct: 573 NTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELADV 630

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRY 427
           + KD +      G     D+ +       L+++  ++  +   + A++ ++ L++++ +Y
Sbjct: 631 VKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKY 685

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  EL   N         V  E ++ +  ++  F P L  +++ ++
Sbjct: 686 K------ELDNINE-------AVIKEGVQTIVTIIAPFAPHLGEELWTMI 722


>gi|206561710|ref|YP_002232475.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693126|sp|B4EEW1|SYL_BURCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|198037752|emb|CAR53696.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 864

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|161869382|ref|YP_001598549.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082328|sp|A9M1J7|SYI_NEIM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161594935|gb|ABX72595.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 929

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+ +++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|147677174|ref|YP_001211389.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083135|sp|A5D416|SYL_PELTS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146273271|dbj|BAF59020.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 827

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y      YP+ + H+GH     I DV+ARF  + G  VL   G D  G     AA
Sbjct: 31  DRPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQGYHVLHPMGWDAFGLPAENAA 90

Query: 63  -QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
            ++ GV    +   N  + R     L ISYD    + T    ++   + L+ ++   G  
Sbjct: 91  IKHGGVHPAEWTLDNIESMRAQLKQLGISYDWNREVATCHPGYYRWTQWLFLQLFHNGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +         +++V  G           PV+  E E +FF+++ Y ++LL
Sbjct: 151 YKKKAAVNWCPGCATVLANEQVKDGG----CERCKAPVEKRELEQWFFKITDYAERLL 204



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 25/236 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKG 300
           D +K  +W P D ++ G +    H +Y   F        L +NL     + + G +L  G
Sbjct: 522 DRNKVDYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLKLVSNLEPFSNLLTQGMVLKDG 581

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+ P +++   G D  R F++      +D  +   G++        N +  
Sbjct: 582 AKMSKSRGNVVSPEDIVARYGADTARLFILFAAPPERDLEWSDQGVEGCYR--FLNRVWR 639

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           LV   ++ +LK+    +   G    ++  +  V    ++++ E++  +   + A++ ++ 
Sbjct: 640 LVM-PLAGLLKEAPAAV--SGKLVGANREMRRVTHSTIKKVTEDISARFNFNTAVSAIME 696

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           LV+ + ++ +  +         DR   VL    E +  L +LL  F P +  ++++
Sbjct: 697 LVNALYQFREIPE--------SDRNPAVLR---EAVESLLLLLAPFAPHITEELWE 741


>gi|62290672|ref|YP_222465.1| leucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|254689960|ref|ZP_05153214.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254698111|ref|ZP_05159939.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730995|ref|ZP_05189573.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256258215|ref|ZP_05463751.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260755495|ref|ZP_05867843.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260758718|ref|ZP_05871066.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762552|ref|ZP_05874889.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884516|ref|ZP_05896130.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297249064|ref|ZP_06932772.1| leucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309371|sp|Q57B80|SYL_BRUAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|62196804|gb|AAX75104.1| LeuS, leucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|260669036|gb|EEX55976.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672978|gb|EEX59799.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675603|gb|EEX62424.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260874044|gb|EEX81113.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297174197|gb|EFH33554.1| leucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 877

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMI------LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            V R   ++      LKD      T G      +++      V  +I +   N+ + R  
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAVHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
             V +L   + +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|318041444|ref|ZP_07973400.1| leucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 885

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 1/103 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 36  EAFYALSMFPYPSGNLHMGHVRNYVITDVVARVQRLRGKKVLHPMGWDAFGLPAENAAIE 95

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            GV    + DQN  + R+  + L +S  D+ R     H D  R
Sbjct: 96  RGVDPGGWTDQNIASMREQLNQLGLSI-DWDREVATCHADYYR 137


>gi|303238820|ref|ZP_07325352.1| leucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593699|gb|EFL63415.1| leucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 800

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       +V++R  R++G +VLF  G D  G      
Sbjct: 29  EKTKFYALVEFPYPSGAGMHVGHIKAYSGLEVVSRKRRMEGYNVLFPIGFDAFGLPTENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  +V  D+N   F +    +  S+D    I TT++ ++   + ++ K+ +KG +
Sbjct: 89  AIKTGMHPRVITDKNIVKFTEQLKRVGFSFDWSRVIDTTDEDYYKWTQWIFLKMFEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           ++      Y    +   ++++    + G   +  H+ V    ++ ++ R++ Y +KLL  
Sbjct: 149 FRNTALVNYCPSCKVVLSNED----SQGGKCDICHSDVVQKSKDVWYLRITEYSEKLLQG 204

Query: 180 YE 181
            E
Sbjct: 205 LE 206



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 27/182 (14%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK-GEK 302
           K K+W P D +  G + +  H IY   W  FL      N P P  K  + G IL   GEK
Sbjct: 520 KLKYWMPVDWYNGGMEHVTRHMIYSRFWHHFLYDIGVVNTPEPYAKRTAQGLILGPDGEK 579

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP++V++  G D LR +++         F          +     G    +
Sbjct: 580 MSKSKGNVVDPLDVVDVFGADVLRTYVL---------FMGDYASAAPWSDSSVRGCKRFL 630

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++    YD  I     FT   E+I    ++ ++++  +++    + A+A ++ L++
Sbjct: 631 ERVANL----YD--IANGEGFTPELETIF---NKTIKKVSNDIEEMKFNTAIAALMGLIN 681

Query: 423 EV 424
           E+
Sbjct: 682 EI 683


>gi|260578308|ref|ZP_05846224.1| valine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603610|gb|EEW16871.1| valine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 932

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 24/172 (13%)

Query: 254 KFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLP----KKVFSHGFILH 298
           KF+P  + V G DIL            F + + P  L +     P    K +F HG +  
Sbjct: 504 KFYPTSVLVTGYDILFFWVARMMMFATFASKHTPEILGTGKDGRPQIPFKDIFLHGLVRD 563

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           + G K+SKSLGN IDP++ + + G DALR+ L R    G D    +D  +   N   A  
Sbjct: 564 EHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGSDLPVGEDAAQSSRN--FATK 621

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           + N  +   +++     G +P     T++D  IL      L+E+R+ + + L
Sbjct: 622 LYN--ATKFALMNGARVGELPARETLTDADRWILD----RLEEVRQLVDDAL 667



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 14/93 (15%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K   S  +  PN   Q H+GHA +  + D +AR  R+ G +VL+  G+D          
Sbjct: 64  DKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRKRMQGFEVLWLPGSD---------- 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
            +AG+ T+  V+ N +   +  D  D   D F+
Sbjct: 114 -HAGIATQTKVEANLKE-TEGKDRFDYGRDAFV 144


>gi|254703573|ref|ZP_05165401.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754206|ref|ZP_05997915.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261743959|gb|EEY31885.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 877

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADIARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|167586114|ref|ZP_02378502.1| leucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 864

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|312863994|ref|ZP_07724230.1| leucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100407|gb|EFQ58614.1| leucine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 833

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|254714649|ref|ZP_05176460.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717547|ref|ZP_05179358.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261219381|ref|ZP_05933662.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261322443|ref|ZP_05961640.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260924470|gb|EEX91038.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261295133|gb|EEX98629.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 877

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|240127458|ref|ZP_04740119.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268685835|ref|ZP_06152697.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626119|gb|EEZ58519.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVLKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  ++D   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIGDAVQQADMVE 686

Query: 388 -ESILSVCSRVLQEIREN--MQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE            H A+  ++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|188528338|ref|YP_001911025.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144578|gb|ACD48995.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 806

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELL 199



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|119385489|ref|YP_916545.1| leucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|189030294|sp|A1B5Q5|SYL_PARDP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119375256|gb|ABL70849.1| leucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 844

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y+     YP+ + H+GH     + DV+ARF R  G  VL   G D  G     AA
Sbjct: 28  ERPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARFKRAQGFSVLHPMGWDAFGMPAENAA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKIS 114
              G   + +   N    R     L +S D        R   TC        + L+  + 
Sbjct: 88  MEQGGHPRDWTYGNIATMRGQLKPLGLSID------WSREFATCDDAYVAQQQALFLDML 141

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           + G I +      +   D     +++V    DG+ + +    V+  E   +FF++S Y D
Sbjct: 142 EAGLITRKSAQVNWDPVDMTVLANEQVI---DGKGWRSGAT-VERKELTQWFFKISDYSD 197

Query: 175 KLLS 178
           +LLS
Sbjct: 198 ELLS 201



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 35/173 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ ++E  G D  R+F++ +    +D  +   G      A+ AN     
Sbjct: 621 KMSKSKKNVVDPVNIVEGFGADTARWFMLSDSPPERDVEWTAAG------AEAAN----- 669

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R ++ + +  D  IP  GA    D  +     R + E+   ++    ++A+A++  L 
Sbjct: 670 --RFLARVWRLAD-EIPEDGA----DPDLTRAAHRAIDEVTRAIEGFAFNKAVAKIYELA 722

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +        E ++              E +R +A L+   VP LA +I+
Sbjct: 723 NAIAKSGAGG---ESRR--------------EALRIMAQLMAPMVPHLAEEIW 758


>gi|254671606|emb|CBA09289.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|222444486|ref|ZP_03607001.1| hypothetical protein METSMIALI_00097 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434051|gb|EEE41216.1| hypothetical protein METSMIALI_00097 [Methanobrevibacter smithii
           DSM 2375]
          Length = 905

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+  + L+  G+   P+      +PA++   G DI+R  A Y       L+   
Sbjct: 474 VLDTWMDSSISPLSIAGW---PNEGYENNFPANIRPQGHDIIRTWAFYTTLRCLALTGKK 530

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +       G K+SKS GNVI P EVIE+ G DALR +    +  G D  +D  
Sbjct: 531 PFDDIVINGMVFGEDGYKMSKSRGNVIAPDEVIEQYGADALRTWAANSVP-GSDVIFDWK 589

Query: 345 GLK 347
            +K
Sbjct: 590 DIK 592



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 24/162 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           + +  I T   YP    H+GH    +  D+ AR+ RL GLDVLFT G D HG     K  
Sbjct: 36  KPRYIIDTPPPYPTGSIHLGHVLNWVYIDMNARYRRLKGLDVLFTQGWDCHGLPTEVKVE 95

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCR 107
           +  G+                   QN    +D    L  S D   +FI  T +    T +
Sbjct: 96  ETHGIKKNDVSRAKFREYCIELTTQNIAKMKDQMQALGFSQDWSREFITMTPEYMKRT-Q 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR-------DEAYYNDDEVY 142
             + K+ D+G IY+G +   +  R        E  Y+D+E +
Sbjct: 155 YSFLKMYDEGLIYQGIHPVNWCPRCETAIAFAEVEYSDNETF 196


>gi|17986526|ref|NP_539160.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|163845384|ref|YP_001623039.1| leucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225628361|ref|ZP_03786395.1| leucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225853251|ref|YP_002733484.1| leucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|254694452|ref|ZP_05156280.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254708340|ref|ZP_05170168.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254708807|ref|ZP_05170618.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256030333|ref|ZP_05443947.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256045403|ref|ZP_05448297.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256114371|ref|ZP_05455104.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256160504|ref|ZP_05458193.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255710|ref|ZP_05461246.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256263261|ref|ZP_05465793.1| leucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|256370211|ref|YP_003107722.1| leucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168007|ref|ZP_05754818.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260565705|ref|ZP_05836188.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|261214766|ref|ZP_05929047.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261222921|ref|ZP_05937202.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261315840|ref|ZP_05955037.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316300|ref|ZP_05955497.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261757452|ref|ZP_06001161.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265987367|ref|ZP_06099924.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991832|ref|ZP_06104389.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995671|ref|ZP_06108228.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265998880|ref|ZP_06111437.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294851046|ref|ZP_06791722.1| leucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|32171576|sp|Q8YJ44|SYL_BRUME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189082986|sp|A9WWT1|SYL_BRUSI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083245|sp|A5VSE9|SYL_BRUO2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782488|sp|C0RF58|SYL_BRUMB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17982131|gb|AAL51424.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|163676107|gb|ABY40217.1| leucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225616207|gb|EEH13255.1| leucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225641616|gb|ACO01530.1| leucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256000374|gb|ACU48773.1| leucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260151078|gb|EEW86173.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260916373|gb|EEX83234.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260921505|gb|EEX88158.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261295523|gb|EEX99019.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261304866|gb|EEY08363.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737436|gb|EEY25432.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262553569|gb|EEZ09338.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|262766955|gb|EEZ12573.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263002788|gb|EEZ15191.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093225|gb|EEZ17322.1| leucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659564|gb|EEZ29825.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294821689|gb|EFG38685.1| leucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|326409810|gb|ADZ66875.1| leucyl-tRNA synthetase [Brucella melitensis M28]
 gi|326539528|gb|ADZ87743.1| leucyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 877

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|148259647|ref|YP_001233774.1| isoleucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401328|gb|ABQ29855.1| Isoleucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 942

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  F A    A       P  K + + GF+L  +G K+SKSLGNV  
Sbjct: 566 WPADLYLEGSDQHRGWFQASLLEAVGTRGTAPF-KAIVTDGFVLDEQGRKMSKSLGNVTA 624

Query: 313 PIEVIEEVGVDALRYFLV-----REIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           P +VI++ G D LR +++      ++  GKD    +  L +R+   L   +G L
Sbjct: 625 PQQVIDQYGADILRLWVMNSDIHNDLRIGKDILKQQADLYRRIRNTLRWVLGGL 678



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT- 69
           Y N   HIGHA   I  D++ R  ++ G D  +  G D HG     K+ +  + AG    
Sbjct: 66  YANGNLHIGHALNKIHKDLINRARQMAGFDANYVPGWDCHGLPIEWKVEEGYRKAGKNKD 125

Query: 70  KVFVDQNSRNFRDMAD-VLDISYDDFIR 96
           +V + +  R  RD A   LD+  ++F R
Sbjct: 126 EVPILEFRRECRDYAQHWLDVQAEEFKR 153


>gi|107021731|ref|YP_620058.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688677|ref|YP_834300.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123245293|sp|Q1BZ70|SYL_BURCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230614|sp|A0K4I0|SYL_BURCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|105891920|gb|ABF75085.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646766|gb|ABK07407.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 864

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|325197664|gb|ADY93120.1| isoleucyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|322421080|ref|YP_004200303.1| leucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127467|gb|ADW15027.1| leucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 824

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           R+K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  RKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAAI 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           QN     K +  +N    R     L +SY  D  + T +  ++   + ++ ++  KG  Y
Sbjct: 92  QNKSHPAK-WTYENIAYMRGQLKRLGLSYDWDRELATCDLDYYKWEQKIFLEMYRKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   +  +  + E    +++V    DG  +      VQ  E E + FR++ Y  +LL   
Sbjct: 151 KKSSAVNWCPKCETVLANEQV---EDGCCWRCDA-IVQQKELEQWSFRITNYAQELLDDT 206

Query: 179 -YYESHPEFILPIER 192
                 PE +L ++R
Sbjct: 207 YKLAGWPERVLTMQR 221



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 31/244 (12%)

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFS 292
           T G LD     + + W P D ++ G +    H +Y   F      L   N+  P   + +
Sbjct: 515 TAGPLDR---EQVEAWMPVDQYIGGIEHAVLHLLYARFFTKVLRDLGYCNVDEPFSNLLT 571

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
            G ++  G K+SKS GNV+DP  +IE  G D  R F +      KD  +   G+      
Sbjct: 572 QGMVIKDGAKMSKSKGNVVDPNALIERYGADTARLFSLFAAPPEKDLDWSDQGV------ 625

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQL-I 410
           D +    N V R V  +L    G         +   +++     + ++++ E+++ +   
Sbjct: 626 DGSYRFLNRVWRLVFDVLPAIKGAGSVETDKLSAEGKNLRRAVHKTIKKVSEDIEERFHF 685

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A V+ LV+ + + F A       K  P+  + V     E +  +A LL  FVP  A
Sbjct: 686 NTAIAAVMELVNAI-QAFSA-------KAAPENVAVVR----EAMESVARLLAPFVPHFA 733

Query: 471 NKIF 474
            +++
Sbjct: 734 EELW 737


>gi|300771344|ref|ZP_07081220.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762014|gb|EFK58834.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 884

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 150/366 (40%), Gaps = 76/366 (20%)

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           W+  R  A+YND                   +W+        ++  +++ +  + SH + 
Sbjct: 419 WWGQRIPAWYNDKN-----------------EWV--------VAKTEEEAIQEFTSHGKS 453

Query: 187 ILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
              I + ++V+ ++  SGL  +S+    FD G++ P++  +  Y      TN L T   +
Sbjct: 454 AAGIRQEDDVLDTWFSSGLWPMSV----FD-GVRNPENQDFNYYY----PTNDLVTAPEI 504

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKIS 304
                    FW A + ++G +              +   P  K V+  G +  K G K+S
Sbjct: 505 -------LFFWVARMMIMGHN-------------YTGKAPF-KNVYLTGIVRDKLGRKMS 543

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN  DPIE++E+ G D +R  ++     G D  +D    ++  N   AN I N    
Sbjct: 544 KSLGNSPDPIELMEQYGTDGVRVGMLLSSPAGNDLMFDVSYCEQGRN--FANKIWNAFR- 600

Query: 365 SVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
               ++K ++    P P A   S     S  ++ L EI E+  +  +  AL     L+  
Sbjct: 601 ----LVKGWEISNEPAPEADKTSAAWFESRFNQALVEIEEHFASYRLSDALMATYKLI-- 654

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR----QLAILLQAFVPKLANKIF-DILF 478
               +D    W L+   P   S +   T E ++    ++  L   F+P L  +++ D LF
Sbjct: 655 ----WDDFCAWYLELIKPAYGSPIPAGTFETVKTFFQRVLTLAHPFMPFLTEELWHDELF 710

Query: 479 VADENR 484
              E +
Sbjct: 711 GTREAK 716


>gi|224418440|ref|ZP_03656446.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827756|ref|ZP_04870641.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141971|ref|ZP_07804164.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511162|gb|EES89821.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131002|gb|EFR48619.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 879

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 21/135 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILRF 270
           +I  DP  ++  W  +     +T G+ +   G           +F+P  L + G DIL F
Sbjct: 443 QIHQDPD-VLDTWFSSALWPFSTLGFGNGEWGEGTLWQKDDLKEFYPNSLLITGFDILFF 501

Query: 271 HAIYWPAFLLS------ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
               W A +L       + LP P  ++ H  +    G+K+SKS GNVIDP+E+IE+   D
Sbjct: 502 ----WVARMLMMGEHFLSKLPFPD-IYLHALVRDENGQKMSKSKGNVIDPLELIEKYSAD 556

Query: 324 ALRYFLVREIACGKD 338
            LR+ L    A G+D
Sbjct: 557 VLRFTLAILCAQGRD 571


>gi|322390802|ref|ZP_08064312.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142472|gb|EFX37940.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 833

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|306844787|ref|ZP_07477372.1| leucyl-tRNA synthetase [Brucella sp. BO1]
 gi|306274959|gb|EFM56729.1| leucyl-tRNA synthetase [Brucella sp. BO1]
          Length = 877

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V  K +  QN     R  + M   LD S +    T +  ++   ++L+  + +KG +
Sbjct: 93  QNKVHPKEWTYQNIATMKRQLKSMGLSLDWSRE--FATCDVEYYHRQQMLFIDLYEKGLV 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 151 TRKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 205



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G         A G   
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFVLSDSPPERDVIWTEAG---------AEGAHR 677

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +    +    P A T+ +   +     + ++ + ++++    +R +A++ 
Sbjct: 678 FVQRIWRLVAEAAPALKDVAPKAGTQGEALGVSKAAHKAVKAVGDDIEKLAFNRGVARLY 737

Query: 419 SLVSEVD----RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            LV+ +     +  D +   E+K    +    ++ +T  ++  LA
Sbjct: 738 ELVNTLSGALQQAADGKADAEMKGALREATEMLVLMTAPMMPHLA 782


>gi|150020359|ref|YP_001305713.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166229776|sp|A6LK77|SYI_THEM4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|149792880|gb|ABR30328.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 908

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 26/186 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---ANLPL 286
           VWID+  ++            SK + +P DL++ G D  R    +  +  +S    N+  
Sbjct: 521 VWIDSGCSFEAVIR-------SKGEKFPVDLYLEGDDQHR--GWFQSSIFMSVAHTNIAP 571

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGF 340
            K V +HGFI  + G K+SKSLGNVIDP E++++ G D LR ++        I  GK+  
Sbjct: 572 YKSVVTHGFIKDEHGRKMSKSLGNVIDPKEIVDKYGADILRLWVSSIDFFDNIRVGKNII 631

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             +    K++   L   +GNL     +MI+  ++ ++P        D+  L     V+ +
Sbjct: 632 QQQVETYKKLRNTLRYLLGNLNDFEENMIVP-FEKLLPL-------DKWALGRLQEVISQ 683

Query: 401 IRENMQ 406
           + E+ +
Sbjct: 684 VTEHFE 689


>gi|261350966|ref|ZP_05976383.1| valine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860306|gb|EFC92604.1| valine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 905

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+  + L+  G+   P+      +PA++   G DI+R  A Y       L+   
Sbjct: 474 VLDTWMDSSISPLSIAGW---PNEGYENNFPANIRPQGHDIIRTWAFYTTLRCLALTGKK 530

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +       G K+SKS GNVI P EVIE+ G DALR +    +  G D  +D  
Sbjct: 531 PFDDIVINGMVFGEDGYKMSKSRGNVIAPDEVIEQYGADALRTWAANSVP-GSDVIFDWK 589

Query: 345 GLK 347
            +K
Sbjct: 590 DIK 592



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 24/162 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           + +  I T   YP    H+GH    +  D+ AR+ RL GLDVLFT G D HG     K  
Sbjct: 36  KPRYIIDTPPPYPTGSIHLGHVLNWVYIDMNARYRRLKGLDVLFTQGWDCHGLPTEVKVE 95

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCR 107
           +  G+                   QN    +D    L  S D   +FI  T +    T +
Sbjct: 96  ETHGIKKNDVSRAKFREYCIELTTQNIAKMKDQMQALGFSQDWSREFITMTPEYMKRT-Q 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR-------DEAYYNDDEVY 142
             + K+ D+G IY+G +   +  R        E  Y+D+E +
Sbjct: 155 YSFLKMYDEGLIYQGIHPVNWCPRCETAIAFAEVEYSDNETF 196


>gi|237747479|ref|ZP_04577959.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378830|gb|EEO28921.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 970

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 28/260 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +LT    L      + +F PADL++ G D  R  FH+    + +L    P  
Sbjct: 571 VWFDSGATHLTV---LRGSHARELRF-PADLYLEGSDQHRGWFHSSLLTSSMLDGCPPY- 625

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF++  +G K+SKS+GNVI P +V + +G D LR ++      G+    D+  +
Sbjct: 626 KMLLTHGFVVDGEGRKMSKSMGNVIAPQKVFDTLGADILRLWVASTDYSGELSISDE--I 683

Query: 347 KKRVNAD---LANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEI 401
            KRV      + N +  L+S +      D+D            E D   L+    +  EI
Sbjct: 684 LKRVTESYRRIRNTLRFLLSNTA-----DFDATRDAVAIDELLEVDRYALASMKSLQTEI 738

Query: 402 RENMQNQLIHRALAQVISLVSEV--DRYFDAQK-----PWELKKTNPDRASTVLYVTVEV 454
             +      H  +A++ +  SE     Y D  K       E+ +      + + ++T  +
Sbjct: 739 MAHYDKFEFHPVVAKLQTYCSEELGSLYLDILKDRLYTSGEVSRARRSAQTALWHITHAL 798

Query: 455 IRQLAILLQAFVPKLANKIF 474
           +R +A +L +F  + A K F
Sbjct: 799 LRLMAPIL-SFTSEEAWKAF 817



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R +  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 63  KGRPQFILHDGPPYANGDIHIGHAVNKILKDIVIKSRGLAGFDAPYVPGWDCHGMPI 119


>gi|224476295|ref|YP_002633901.1| isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782437|sp|B9DPP7|SYI_STACT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222420902|emb|CAL27716.1| putative isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 915

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 25/228 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL++ G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYLEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K + SHGF++  +G+K+SKSLGNVI P +++++ G D  R + V  +    D    
Sbjct: 577 SPY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQIVKQKGADIARLW-VSSVDYLSDVRIS 634

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + LK+   AD+   I N    ++  +L + +   P   A  ESD  +L V   +L  +R
Sbjct: 635 DEILKQ--TADVYRKIRN----TLRFMLGNVNDFNPETDAVPESD--LLEVDRYLLNRLR 686

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           E  ++ + H      +++  EV  + +     EL     D    +LY+
Sbjct: 687 EFTESIINHYDNFDYLNIYQEVQNFINV----ELSNFYLDYGKDILYI 730



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGHESYILHDGPPYANGNLHMGHALNKILKDFIVRYKSMQGYYSPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K   +     FR +      + +DI   DF R            T K  ++ 
Sbjct: 105 LTKKGVKRK---EMPISEFRKLCEEFALEQIDIQKKDFKRLGVNGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I L+ +++D+G IYKG    ++S   E+   + E+
Sbjct: 162 AQIRLFGEMADRGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|172059636|ref|YP_001807288.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689177|sp|B1YTA7|SYL_BURA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171992153|gb|ACB63072.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 864

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|308064327|gb|ADO06214.1| leucyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 806

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELL 199



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|306845518|ref|ZP_07478087.1| isoleucyl-tRNA synthetase [Brucella sp. BO1]
 gi|306273839|gb|EFM55666.1| isoleucyl-tRNA synthetase [Brucella sp. BO1]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|303236864|ref|ZP_07323443.1| leucine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483032|gb|EFL46048.1| leucine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 949

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  KNKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            A   G    +  D+N   +R+  D +  S+D    IRT + +++
Sbjct: 88  YAIQTGQHPAITTDKNIARYREQLDKIGFSFDWEREIRTCDPKYY 132


>gi|291515873|emb|CBK65083.1| Isoleucyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 1131

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 38/290 (13%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+         Y  +N +G   + +PAD    G D  R  F  ++  A +L  ++  
Sbjct: 603 VWFDSGAMPYAQVHYPFENKEGF-GQVYPADFIAEGVDQTRGWFFTLHAIASMLFDSMAF 661

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K + S+G +L K G K+SK LGN +DP EV++  G DA R++++       +  +D+DG
Sbjct: 662 -KNIISNGLVLDKNGNKMSKRLGNAVDPFEVLDTYGADATRWYMISNSQPWDNLKFDRDG 720

Query: 346 ---LKKRVNADLANGIGNLVSRSVSMILKDYDGM------IPTPGAFTESDESILSVCSR 396
              ++++    L N      + S   +  + DG       +P      E D  I+S+ + 
Sbjct: 721 VDEVRRKFFGTLYN------TYSFFALYANVDGFTGREEEVPMEKR-PEIDRWIISLLNT 773

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRAS-TVLYVT 451
           +++ + E++++     A   +   V E +  ++   + ++ W    +    A+   LY  
Sbjct: 774 LVKNVTESLEDYDPTPAARAIQEFVGENLSNWYVRLNRKRFWGGGMSEDKLAAYQTLYTC 833

Query: 452 VEVIRQLAILLQAFVPKLANKIF-DILFVADENR-------CFQSLDQRL 493
           +E +  LA     F P ++++IF D+  V+  ++        F + D+RL
Sbjct: 834 LETVTMLA---APFAPFISDRIFTDLNAVSGRHKDESVHLAAFPTADERL 880



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTT-----K 70
           N  P I H     I DV  R+    G  V    G D HG  +    +   G+T      K
Sbjct: 51  NGMPGIHHVMARTIKDVFCRYKTQQGYLVHRKAGWDTHGLPVELGVEKKLGITKEDIGKK 110

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIR-------------TTEKRHHDTCRILWKKISDKG 117
           + +++ +R  R+        ++D  R             T + ++ +T   L K++ DKG
Sbjct: 111 ISIEEYNRTCREAVMEFTGKWEDLTRKMGYWVNMDDPYITYDNKYIETLWWLLKQLFDKG 170

Query: 118 DIYKG 122
            +YKG
Sbjct: 171 LLYKG 175


>gi|226311123|ref|YP_002771017.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094071|dbj|BAH42513.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 1026

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 36/242 (14%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD+   G D  R  F ++   + L +   P  K V S G +L + G+K+SKS GN ID
Sbjct: 540 YPADIISEGIDQTRGWFFSLLAVSTLYNGKAPY-KAVISTGHVLDEHGQKMSKSKGNGID 598

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P EVIEE G DA R+ L+ + A      +      KR+ A+    +       +  I   
Sbjct: 599 PWEVIEEFGADAFRWALLSDSAP-----WSSKRFSKRIVAEAKYKV-------IDKIHST 646

Query: 373 YD-----GMI--------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +D     G+I        PT     + D  I S  +  LQ + + ++          + +
Sbjct: 647 HDFYSLYGLIDAFKPEEHPTQPPVNKLDRWIFSRLNTTLQHVVKGLETYDFMNPAGHIEA 706

Query: 420 LVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475
            V E+  ++      + W    T PD+ S   Y T+ EV+  LA ++  + P +A  ++ 
Sbjct: 707 FVDELSNWYIRRSRDRFWSSGMT-PDKVSA--YQTLREVLLTLAKMIAPYAPLIAEDLYG 763

Query: 476 IL 477
            L
Sbjct: 764 NL 765



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 21/39 (53%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N QPHIGH    +I D + R+  + G  V+   G D HG
Sbjct: 50 NGQPHIGHVLGRVIKDFIGRYKTMSGYRVVRKAGWDTHG 88


>gi|225076903|ref|ZP_03720102.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
 gi|224951789|gb|EEG32998.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
          Length = 876

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|148642335|ref|YP_001272848.1| valyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148551352|gb|ABQ86480.1| valyl-tRNA synthetase, ValS [Methanobrevibacter smithii ATCC 35061]
          Length = 905

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+  + L+  G+   P+      +PA++   G DI+R  A Y       L+   
Sbjct: 474 VLDTWMDSSISPLSIAGW---PNEGYENNFPANIRPQGHDIIRTWAFYTTLRCLALTGKK 530

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +       G K+SKS GNVI P EVIE+ G DALR +    +  G D  +D  
Sbjct: 531 PFDDIVINGMVFGEDGYKMSKSRGNVIAPDEVIEQYGADALRTWAANSVP-GSDVIFDWK 589

Query: 345 GLK 347
            +K
Sbjct: 590 DIK 592



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 24/162 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           + +  I T   YP    H+GH    +  D+ AR+ RL GLDVLFT G D HG     K  
Sbjct: 36  KPRYIIDTPPPYPTGSIHLGHVLNWVYIDMNARYRRLKGLDVLFTQGWDCHGLPTEVKVE 95

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCR 107
           +  G+                   QN    +D    L  S D   +FI  T +    T +
Sbjct: 96  ETHGIKKNDVSRAKFREYCIELTTQNIAKMKDQMQALGFSQDWSREFITMTPEYMKRT-Q 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR-------DEAYYNDDEVY 142
             + K+ D+G IY+G +   +  R        E  Y+D+E +
Sbjct: 155 YSFLKMYDEGLIYQGIHPVNWCPRCETAIAFAEVEYSDNETF 196


>gi|119872747|ref|YP_930754.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166231635|sp|A1RTX9|SYL_PYRIL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119674155|gb|ABL88411.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 945

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 33/229 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    GKD++  H  ++  F   A  P    P+++ ++G++L +GEK+SKS  NV+
Sbjct: 589 WYPLDSRNSGKDLIPNHLTFF-IFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVL 647

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                +E  G D LR  L       +D  F D +    R NA     I  LV R +    
Sbjct: 648 PLDRAVEMYGPDPLRATLALAAEVEQDLDFRDAEA---RRNAQQLMAIYTLVQRLIQNAE 704

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFD 429
               G I         D+ +++  SR+L + RE  +   + +A  +VI     V D+Y  
Sbjct: 705 NRPAGWI---------DQWLIAEISRILDKAREAYEKVRVRQAAVEVIYNAKAVFDQYLA 755

Query: 430 -AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +KP +L               +E  R   + ++  VP +A +++ +L
Sbjct: 756 MVEKPTKL--------------ALEAARAWVVAMEPIVPHIAEELWALL 790



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 36/70 (51%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+ A  YPN   HIGH    +IADVLARF+R  G  VL+  G    G  I   A+  
Sbjct: 35  KYFITAAYPYPNGAVHIGHGRTYLIADVLARFYRHMGRVVLYPMGFHYTGTPILTIAEVI 94

Query: 66  GVTTKVFVDQ 75
               K  +++
Sbjct: 95  AAGDKTVIEE 104


>gi|83319485|ref|YP_424244.1| valyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|83283371|gb|ABC01303.1| valyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 872

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 146/353 (41%), Gaps = 59/353 (16%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+ + WG +IP 
Sbjct: 359 DQWFVKMDKFKNMVIDLQNSDNKINFFPNRFSDVLNRWMTNAHDWCISRQLW-WGHQIPC 417

Query: 222 --DDPQYIMYVWI-------------DALTNYLTT-----TGYLDNPDGSKAKF---WPA 258
                   MYV I             D L  + ++     +  L+N D     F   +P 
Sbjct: 418 WYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKDLESEYFKNYFPT 477

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVID 312
            + V G DI+ F    W A ++   L   K+     V  HG +  +   K+SKSLGN ID
Sbjct: 478 SVLVTGYDIIFF----WVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNGID 533

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G D+LR FL+     G+D  Y  + +    N    N + N  SR V + L D
Sbjct: 534 PMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKILASWN--FINKLWN-ASRYVFLNLDD 590

Query: 373 YDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           +    P         +++ IL+  S+    + E M       A   +   V      ++ 
Sbjct: 591 HFEFDPNFYKTDLEITNQWILTQLSKTQAYVYEKMNKYEFSLAGNHLWDFV------WNK 644

Query: 431 QKPWELK---------KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              W ++         K N     T+ Y    V++++ I+L   +P ++ +I+
Sbjct: 645 YCSWYIEFSKVNLSNDKFNYQTKQTLFY----VLKEILIMLHPLIPFVSEEIY 693



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          HIGHA++  + D + RF +L G D LF  G D           ++G++T+V V+Q
Sbjct: 53 HIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMD-----------HSGISTQVKVEQ 96


>gi|17989388|ref|NP_542021.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256043121|ref|ZP_05446063.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564343|ref|ZP_05834828.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265989553|ref|ZP_06102110.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|81850045|sp|Q8YB57|SYI_BRUME RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|17985262|gb|AAL54285.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260151986|gb|EEW87079.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263000222|gb|EEZ12912.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIRVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|254516563|ref|ZP_05128622.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674986|gb|EED31353.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 822

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y  +   YP+ + H+GH     I+D +AR+ R+ G +VL   G D  G     AA
Sbjct: 34  EGEKFYCLSMFPYPSGKLHMGHVRNYSISDAIARYQRMLGKNVLHPMGWDAFGLPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  + R+    L  S+D    + T    ++   +  + ++ +KG +Y
Sbjct: 94  IANKTAPAKWTYSNIGHMREQLKALGFSFDWERELATCTPEYYRWEQWFFTRLYEKGLVY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P QW      F R++AY ++LL
Sbjct: 154 KKMATVNWDPVDQTVLANEQVIDGRGWRSGALIERREIP-QW------FIRITAYAEELL 206

Query: 178 S---YYESHPEFILPIER 192
           +     E  P+ +  ++R
Sbjct: 207 NDLDKLEGWPDAVRTMQR 224



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 25/192 (13%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  +A +W P D +V G +    H +Y   F        LLS++ P   ++ + G +L  
Sbjct: 520 DKEQADYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLLSSDEPF-TRLLTQGMVLKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN +DP  +I+  G D +R F +      +   + +DG++         G  
Sbjct: 579 GAKMSKSKGNTVDPQSLIDSHGADTVRLFSLFAAPPDQSLEWSEDGVE---------GAH 629

Query: 360 NLVSRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENM-QNQLIHRAL 414
             V R +  +  ++    P P    GA  +++  +       + ++ ++M + Q  + A+
Sbjct: 630 RFVKR-LWRLAHEHTDKGPAPGLDTGALGDAERDVRRKIHETIAKVSDDMGRRQTFNTAI 688

Query: 415 AQVISLVSEVDR 426
           A ++ L +E+ R
Sbjct: 689 AAIMELCNELGR 700


>gi|91205324|ref|YP_537679.1| valyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123388130|sp|Q1RJ74|SYV_RICBR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|91068868|gb|ABE04590.1| Valyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 812

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 27/272 (9%)

Query: 227 IMYVW-IDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W   +++  L+T G  D    +K    K +P DL     +I+R  A Y    A L 
Sbjct: 455 VMDTWATSSVSPQLSTWGISDEFAVNKDRHGKLFPMDLRPQAHEIIRTWAFYTILKAHLH 514

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 515 QNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KLGADTA 573

Query: 341 YDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFT-ESDESILSVC 394
           Y +D +K  KR+   L N     VS+     L D D    +I      T E D+ I++  
Sbjct: 574 YSEDVMKNGKRLVNKLWNA-AKFVSQHFDK-LSDEDKKTNLIDVKEKITHEFDQWIIN-- 629

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQK--PWELKKTNPDRAST 446
              L E+  N  N+L +   A  + L  +       D Y +  K   ++ +  NP    +
Sbjct: 630 --KLVELVNNATNELQNYEYANAMHLTEKFFWSVFCDNYLEISKTRAYDEENKNPSGQYS 687

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +     V++ L  L   F+P +  +++ IL+
Sbjct: 688 SVLTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 37 ETFVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|325201521|gb|ADY96975.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207500|gb|ADZ02952.1| isoleucyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|313884631|ref|ZP_07818389.1| leucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620141|gb|EFR31572.1| leucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 807

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P DL++ G +    H +Y   W  FL    +   K    ++++ G IL    EK+S
Sbjct: 521 AKWLPVDLYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQRLYNQGMILGSNNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +V++E G D LR + +          + ++GL+         G    + R
Sbjct: 581 KSKGNVVNPDDVVKEYGADTLRVYEMFMGPLDASIAWSENGLE---------GSRRFLDR 631

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
              +++ +  G +    +  +SD+  L+ V  + ++++ E+++N   + A++Q++  ++E
Sbjct: 632 VWRLLVDEETGQL--KASVQDSDDDALTKVYHQTVKKVTEDLENLHFNTAISQLMVFLNE 689

Query: 424 V 424
            
Sbjct: 690 A 690



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 11/193 (5%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y      YP+ Q  H+GH       D+++R  R  G DVL   G D  G    + A +
Sbjct: 33  KYYALDMFPYPSGQGLHVGHPEGYTATDIISRMKRAQGYDVLHPMGWDAFGLPAEQYALD 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G     F  +N +NF+     L  SY  D  + TT+   +   + ++ ++  +G  Y+ 
Sbjct: 93  TGHDPADFTAENIQNFKRQIKSLGFSYDWDREVNTTDPEFYKWTQWIFSELYKRGLAYEE 152

Query: 123 CYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             +  W         N++ +    DG      H PV       +  +++AY D+LL   E
Sbjct: 153 EVAVNWCPALGTVLANEEVI----DGLSERGGH-PVYRKPMRQWVLKITAYADRLLEDLE 207

Query: 182 S--HPEFILPIER 192
               PE +  ++R
Sbjct: 208 EVDWPESVKAMQR 220


>gi|254695332|ref|ZP_05157160.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261215703|ref|ZP_05929984.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260917310|gb|EEX84171.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIRVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|170025236|ref|YP_001721741.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688389|sp|B1JGA5|SYL_YERPY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169751770|gb|ACA69288.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 860

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  I T +  ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITDYAEQLLNDLD 207

Query: 179 YYESHPEFILPIER 192
             ES PE +  ++R
Sbjct: 208 TLESWPEQVKTMQR 221


>gi|15889025|ref|NP_354706.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493741|sp|Q8UEN6|SYV_AGRT5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15156816|gb|AAK87491.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 947

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPEQTP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDDAGNPVEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|103486422|ref|YP_615983.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|122985147|sp|Q1GUM2|SYV_SPHAL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|98976499|gb|ABF52650.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 931

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 12/128 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  DP  ++  W  +      T G+ D+ +  K + +P D+ + G DIL     +W 
Sbjct: 467 GVILTRDPD-VLDTWFSSALWPFATLGWPDDTELLK-RHYPNDVLISGFDIL----FFWD 520

Query: 277 AFLLSANLPLPKKV-----FSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A +    +    +V     + HG +    G+K+SKS GNV+DPI +I++ G DALR+F+ 
Sbjct: 521 ARMAMQGMEFMGEVPWRTLYLHGLVRAPDGQKMSKSKGNVVDPIGLIDQYGADALRFFMC 580

Query: 331 REIACGKD 338
              + G+D
Sbjct: 581 AMESQGRD 588



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 17/77 (22%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ--NSR 78
           HIGHA +  + DVL R+ RL G D L+  GTD           +AG+ T++ V++  N R
Sbjct: 50  HIGHALDNTLQDVLIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQLNER 98

Query: 79  NFRDMADVLDISYDDFI 95
             +      D + D+F+
Sbjct: 99  QQKRT----DFTRDEFV 111


>gi|330826981|ref|YP_004390284.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329312353|gb|AEB86768.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 901

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 6/180 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  RPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +     + ++ D    + T +  ++   + L+ K+ ++G  Y+
Sbjct: 92  KNGVPPARWTYENIAYMKQQMQAMGLAIDWSREVATCDPDYYKWNQWLFLKMLERGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +     PV+  E  GY+ +++ Y  +LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGKGWRTG-APVEKREIPGYYLKITDYAQELLDHVQ 207


>gi|319764765|ref|YP_004128702.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317119326|gb|ADV01815.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 901

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 6/180 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  RPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +     + ++ D    + T +  ++   + L+ K+ ++G  Y+
Sbjct: 92  KNGVPPARWTYENIAYMKQQMQAMGLAIDWSREVATCDPDYYKWNQWLFLKMLERGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +     PV+  E  GY+ +++ Y  +LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGKGWRTG-APVEKREIPGYYLKITDYAQELLDHVQ 207


>gi|254699492|ref|ZP_05161320.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261749947|ref|ZP_05993656.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261739700|gb|EEY27626.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|163844389|ref|YP_001622044.1| isoleucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163675112|gb|ABY39222.1| isoleucyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|161620279|ref|YP_001594165.1| isoleucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|161337090|gb|ABX63394.1| isoleucyl-tRNA synthetase [Brucella canis ATCC 23365]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|115350603|ref|YP_772442.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324034|sp|Q0BIB5|SYL_BURCM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115280591|gb|ABI86108.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 864

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|119357821|ref|YP_912465.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355170|gb|ABL66041.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 904

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 15/149 (10%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL------ 284
           W+  LT    T  + DN D     F+P    V G DI+ F    W A ++ A L      
Sbjct: 466 WLWPLTTLGWTGTHSDNDD--LRAFYPTSTLVTGPDIIFF----WVARMIMAGLYFKGDV 519

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P     F+      KG K+SKSLGN  DP++VI+  G DALR+ ++     G+D  + ++
Sbjct: 520 PFRDVYFTSIIRDMKGRKLSKSLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEE 579

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDY 373
             K  +  + A  + N  SR V M+ + +
Sbjct: 580 --KCELGRNFATKLWN-ASRLVFMLRERF 605


>gi|325293103|ref|YP_004278967.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060956|gb|ADY64647.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 947

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P ++ V G DI+ F    W   ++   L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPEKTP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A
Sbjct: 564 MKDDAGNPVEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILVRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|225686056|ref|YP_002734028.1| isoleucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256262823|ref|ZP_05465355.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642161|gb|ACO02074.1| isoleucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263092644|gb|EEZ16865.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410380|gb|ADZ67444.1| isoleucyl-tRNA synthetase [Brucella melitensis M28]
 gi|326553673|gb|ADZ88312.1| isoleucyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIRVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|224476847|ref|YP_002634453.1| leucyl-tRNA synthetase (fragment 2) [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421454|emb|CAL28268.1| truncated leucyl-tRNA synthetase (fragment 2) [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 490

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 200 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDMGVVPTKEPFQKLFNQGMILGEG 259

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +++   G D LR +      L   IA  + G         RV   
Sbjct: 260 NEKMSKSRGNVVNPDDIVRSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRL 319

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L N  G+L S+ V                    D+S+  V ++ ++++ E+ +    + A
Sbjct: 320 LINEDGSLTSKVVDT-----------------DDKSLQKVYNQTVKKVTEDFETLNFNTA 362

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +     KP+
Sbjct: 363 ISQLMVFINESYKAEQLYKPY 383


>gi|325204795|gb|ADZ00249.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|306840970|ref|ZP_07473711.1| isoleucyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289027|gb|EFM60292.1| isoleucyl-tRNA synthetase [Brucella sp. BO2]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|260568476|ref|ZP_05838945.1| isoleucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260155141|gb|EEW90222.1| isoleucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|256111897|ref|ZP_05452853.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265993345|ref|ZP_06105902.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262764215|gb|EEZ10247.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIRVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|254719936|ref|ZP_05181747.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984944|ref|ZP_06097679.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838525|ref|ZP_07471363.1| isoleucyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264663536|gb|EEZ33797.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406392|gb|EFM62633.1| isoleucyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + I  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKIQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|23499963|ref|NP_699403.1| isoleucyl-tRNA synthetase [Brucella suis 1330]
 gi|81751628|sp|Q8FX81|SYI_BRUSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|23463543|gb|AAN33408.1| isoleucyl-tRNA synthetase [Brucella suis 1330]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R++A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECRELASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|294853217|ref|ZP_06793889.1| isoleucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294818872|gb|EFG35872.1| isoleucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|289525341|emb|CBJ14817.1| valyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434891|gb|ADH17069.1| valyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438611|gb|ADH20764.1| valyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 939

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597



 Score = 43.5 bits (101), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 26/178 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHA    + D L R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTVV 95

Query: 56  ---QKIAKAAQNAGVTTKVFVD------QNSRN-----FRDMADVLDISYDDFIRTTEKR 101
               K +   Q    + + F+       + S+N      R +    D S   F  T +  
Sbjct: 96  ERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +   +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V 
Sbjct: 154 ANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVN 211


>gi|268611662|ref|ZP_06145389.1| isoleucyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 933

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++ +     D P  S    WPADL++ G D  R  F +    + +   + 
Sbjct: 540 IMDVWFDSGVSHTSVMEGEDFPSLS----WPADLYLEGADQYRGWFQSSLLTSVVFKGSS 595

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HG+++  +G+ + KSLGN IDP E+ ++ G D LR ++ 
Sbjct: 596 PY-KAVCTHGWVVDGEGKTMHKSLGNGIDPSEITDQYGADILRLWVA 641


>gi|256014987|ref|YP_003104996.1| isoleucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255997647|gb|ACU49334.1| isoleucyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|294890761|ref|XP_002773301.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239878353|gb|EER05117.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1057

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           I++  DP  ++  W  +    ++  G+ D N D  KA F+P+ +   G DIL F    W 
Sbjct: 565 IELAQDPD-VLDTWFSSGLLPMSALGWPDMNTDDMKA-FFPSSVLETGHDILFF----WV 618

Query: 277 AFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++  +L L  ++  H   LH       G K+SKSLGNVIDP+EV+  +G+  L+  L 
Sbjct: 619 ARMVMMSLALTDELPFHTVCLHSMVRDAHGRKMSKSLGNVIDPLEVMSGIGLPELQEKL- 677

Query: 331 REIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMILKDYDG 375
                 K G   +  +KK +     D  +GI    S ++   L  Y G
Sbjct: 678 ------KHGNLPEREIKKAMKGQEKDFPDGIPECGSDALRFGLLAYTG 719


>gi|222148981|ref|YP_002549938.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735967|gb|ACM36930.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 947

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 17/124 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +      A+++P ++ V G DI+ F    W A ++  +L  
Sbjct: 509 VLDTWFSSALWPFSTLGWPEKTP-EVARYYPTNVLVTGFDIIFF----WVARMMMMSLHF 563

Query: 287 PK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ H  +  K G+K+SKS GNVI+P+E+I+E G DALR+ L    A
Sbjct: 564 MKDEAGNPVEPFETVYVHALVRDKNGQKMSKSKGNVINPLELIDEYGADALRFTLTIMAA 623

Query: 335 CGKD 338
            G+D
Sbjct: 624 QGRD 627



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + D++ RF R+ G DVL+  G D           +AG+ T++ V++ 
Sbjct: 52 HMGHALNNTLQDIMIRFERMRGKDVLWQPGMD-----------HAGIATQMVVERQ 96


>gi|62317149|ref|YP_223002.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|83269132|ref|YP_418423.1| isoleucyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189022408|ref|YP_001932149.1| isoleucyl-tRNA synthetase [Brucella abortus S19]
 gi|225628663|ref|ZP_03786697.1| isoleucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237816708|ref|ZP_04595700.1| isoleucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254691368|ref|ZP_05154622.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254698428|ref|ZP_05160256.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254706253|ref|ZP_05168081.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254711453|ref|ZP_05173264.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254712056|ref|ZP_05173867.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254731875|ref|ZP_05190453.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256029916|ref|ZP_05443530.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256158085|ref|ZP_05456003.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256252960|ref|ZP_05458496.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256256553|ref|ZP_05462089.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260166982|ref|ZP_05753793.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260544382|ref|ZP_05820203.1| isoleucyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260756980|ref|ZP_05869328.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260759646|ref|ZP_05871994.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762889|ref|ZP_05875221.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882791|ref|ZP_05894405.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261220053|ref|ZP_05934334.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261313696|ref|ZP_05952893.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261319062|ref|ZP_05958259.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261319701|ref|ZP_05958898.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261756369|ref|ZP_06000078.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265986934|ref|ZP_06099491.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265996600|ref|ZP_06109157.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|297249909|ref|ZP_06933610.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|88942111|sp|P0C124|SYI_BRUA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|90102026|sp|P0C123|SYI_BRUAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|62197342|gb|AAX75641.1| IleS, isoleucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82939406|emb|CAJ12360.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Isoleucyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189020982|gb|ACD73703.1| isoleucyl-tRNA synthetase [Brucella abortus S19]
 gi|225616509|gb|EEH13557.1| isoleucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237787521|gb|EEP61737.1| isoleucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260097653|gb|EEW81527.1| isoleucyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260669964|gb|EEX56904.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260673310|gb|EEX60131.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677088|gb|EEX63909.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872319|gb|EEX79388.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260918637|gb|EEX85290.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261292391|gb|EEX95887.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261298285|gb|EEY01782.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261302722|gb|EEY06219.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261736353|gb|EEY24349.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262550897|gb|EEZ07058.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264659131|gb|EEZ29392.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|297173778|gb|EFH33142.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|330505005|ref|YP_004381874.1| leucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328919291|gb|AEB60122.1| leucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 870

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 19/243 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNQVAPAKWTYENIAYMKSQLKSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++LLS
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYAEELLS 204

Query: 179 Y---YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIMYVW 231
                +  PE +  ++R     SF    + D  ++    D  +K+    PD      YV 
Sbjct: 205 SLDELDGWPEQVKTMQRNWIGKSFGADIVFDYDVASIGIDGQLKVYSTRPDTLMGATYVA 264

Query: 232 IDA 234
           + A
Sbjct: 265 VAA 267


>gi|307178944|gb|EFN67462.1| Probable leucyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 811

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH     I+DVLARF+RL G +V+   G D  G     AA    +   V+  
Sbjct: 4   YPSGALHMGHVRVYTISDVLARFYRLKGKNVIHPMGWDAFGLPAENAAIERKIDPAVWTS 63

Query: 75  QNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY-KGCYSGW 127
           +N +   D    L+ S+D   +F  T +  ++   + L+ K+ DKG  Y K  Y  W
Sbjct: 64  ENIKTMHDQLKKLNYSFDWEREFA-TCDADYYKWTQDLFLKLFDKGLAYQKKAYVNW 119


>gi|302871850|ref|YP_003840486.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574709|gb|ADL42500.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 920

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 27/269 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  K V +HGF++  +G+K+SKS GNVI P ++I+E G D LR + V      ++   KD
Sbjct: 584 PY-KIVLTHGFVVDGEGKKMSKSEGNVISPFDIIDEFGADILRLWCVSADYTTDMRISKD 642

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                  + +++       +GNL   +       Y+ +        +   +++   ++  
Sbjct: 643 IIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYENLKEIDKWALQRLYTLIEKVTKAY 702

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLYVTVEV 454
           +E   N    L+H        ++   + Y D  K   +  K  + DR  A TV+Y   E+
Sbjct: 703 EEYDYNQVYHLVHN-----FCVIDMSNLYLDINKDRLYASKSESLDRRAAQTVMY---EI 754

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  L  L+   +   A +I+  +   +EN
Sbjct: 755 LVALTKLIAPILSFTAEEIWQNIAYKEEN 783



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRN---FRDMADVLDISYDDFIRTTEKR 101
                V  K+ V+++  N   FR       +SY D  R   KR
Sbjct: 105 -----VIKKLGVNRHEVNPVEFRKKCKEFALSYIDIQRQQFKR 142


>gi|260425995|ref|ZP_05779974.1| isoleucyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260420487|gb|EEX13738.1| isoleucyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 1000

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 31/208 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +       D  DG++     AD+++ G D  R  FH+    A       
Sbjct: 607 VLDVWFDSGSTHAFV--LRDRADGTEDGI--ADVYMEGTDQHRGWFHSSMLQACGTMGRA 662

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF L  KG K+SKSLGN I P EV+++ G D LR ++ +         Y  
Sbjct: 663 PY-RNVVTHGFTLDEKGNKMSKSLGNTIVPEEVVKQYGADILRLWVAQTD-------YTA 714

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D   +R+  ++  G+ +   R    +      M+   G F+E+D        RV      
Sbjct: 715 D---QRIGPEILKGVADSYRR----LRNTMRFMLGALGHFSEAD--------RVEPADMP 759

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            ++  ++HR LA++ + V E  R +D Q
Sbjct: 760 ELERWVLHR-LAELDAKVQEGYRSYDFQ 786



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA    I D++ R H++ G +  +  G D HG  I
Sbjct: 67  YANGHLHIGHALNKTIKDMIVRSHQMMGHEARYVPGWDCHGLPI 110


>gi|254702616|ref|ZP_05164444.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261753200|ref|ZP_05996909.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261742953|gb|EEY30879.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|157826927|ref|YP_001495991.1| valyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166225529|sp|A8GVS7|SYV_RICB8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157802231|gb|ABV78954.1| valyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 812

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 27/272 (9%)

Query: 227 IMYVW-IDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W   +++  L+T G  D    +K    K +P DL     +I+R  A Y    A L 
Sbjct: 455 VMDTWATSSVSPQLSTWGISDEFAVNKDRHGKLFPMDLRPQAHEIIRTWAFYTILKAHLH 514

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 515 QNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KLGADTA 573

Query: 341 YDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFT-ESDESILSVC 394
           Y +D +K  KR+   L N     VS+     L D D    +I      T E D+ I++  
Sbjct: 574 YSEDVMKNGKRLVNKLWNA-AKFVSQHFDK-LSDEDKKTNLIDVKEKITHEFDQWIIN-- 629

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQK--PWELKKTNPDRAST 446
              L E+  N  N+L +   A  + L  +       D Y +  K   ++ +  NP    +
Sbjct: 630 --KLVELVNNATNELQNYEYANAMHLTEKFFWSVFCDNYLEISKTRAYDEENKNPSGQYS 687

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +     V++ L  L   F+P +  +++ IL+
Sbjct: 688 SVLTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 37 ETFVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|254251624|ref|ZP_04944942.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894233|gb|EAY68113.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 945

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 26/259 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            KRV          L     ++   DY       G + E D   ++  +++  E+  + +
Sbjct: 665 LKRVTEGYRRIRNTLRFLLANLSDFDYAQHALPAGEWLEIDRYAVAFSAQLQTELLAHYE 724

Query: 407 NQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTVEVI 455
               H  +A++ +  SE           DR + +      +++    A T LY +T  ++
Sbjct: 725 KYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTQGLL 780

Query: 456 RQLAILLQAFVPKLANKIF 474
           R LA  L +F  + A K+F
Sbjct: 781 RVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|316970809|gb|EFV54681.1| putative valine--tRNA ligase [Trichinella spiralis]
          Length = 1524

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 141/350 (40%), Gaps = 70/350 (20%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------------DD---- 223
           I P   RNE I++  S  +D  LSR+++ WG ++P                   D+    
Sbjct: 434 IFPAGMRNEWINWT-SKSEDWCLSRQSW-WGHRVPAYYANFENDCHPSVWVVASDETDAR 491

Query: 224 -------PQY----------IMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPADLHVIG 264
                  PQY          ++  W  +    L   G+ +    D ++  ++P  L   G
Sbjct: 492 NVIADKYPQYTLANLRQDDDVLDTWFSSALVPLVLGGWPEKFRSDFTENCYFPLSLLETG 551

Query: 265 KDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-- 320
            DIL F A+      L     LP +K+  HG +   + +K+SKS GNVI+P+++I+    
Sbjct: 552 HDILGFWAVKMAMLSLQLVGELPFRKLLLHGMVCDEQRQKMSKSKGNVINPMQLIQGTPS 611

Query: 321 ----------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                     G DA+R+ L+R         +DK  L +      +    N + +S   + 
Sbjct: 612 TETDKGTTAYGADAVRFALLRSNVKADTVAFDKTMLTR------SRHFCNKLWQSFKFLK 665

Query: 371 KDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRY 427
           K ++        +T   D+ ILS  S V++ + E+ +    HR    ++        D Y
Sbjct: 666 KMWNN--DAQHEYTSVVDKWILSRLSTVVKNVNESFETYDFHRCTNDLLDFWWFEFCDVY 723

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K +      P  A  ++ +   V      LL  F+P LA +++ +L
Sbjct: 724 LEWSKHYFYPGRCPT-AENIVSIFATVTDTYLRLLAPFMPFLAEELYSML 772


>gi|312135165|ref|YP_004002503.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775216|gb|ADQ04703.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 920

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 27/269 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  K V +HGF++  +G+K+SKS GNVI P ++I+E G D LR + V      ++   KD
Sbjct: 584 PY-KIVLTHGFVVDGEGKKMSKSEGNVISPFDIIDEFGADILRLWCVSADYTTDMRISKD 642

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                  + +++       +GNL   +       Y+ +        +   +++   ++  
Sbjct: 643 IIKQLTEIYRKIRNTARFLLGNLFDFNPKTDKVGYENLKEIDKWALQRLYTLIEKVTKAY 702

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLYVTVEV 454
           +E   N    L+H        ++   + Y D  K   +  K  + DR  A TV+Y   E+
Sbjct: 703 EEYDYNQVYHLVHN-----FCVIDMSNLYLDINKDRLYASKSESLDRRAAQTVMY---EI 754

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  L  L+   +   A +I+  +   +EN
Sbjct: 755 LVALTKLIAPILSFTAEEIWQNIAYKEEN 783



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNS---RNFRDMADVLDISYDDFIRTTEKR 101
                V  K+ V+++      FR       +SY D  R   KR
Sbjct: 105 -----VIKKLGVNRHEVEPVEFRKKCKEFALSYIDIQRQQFKR 142


>gi|256059565|ref|ZP_05449764.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261323533|ref|ZP_05962730.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261299513|gb|EEY03010.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 972

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|255579057|ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
 gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase, putative [Ricinus communis]
          Length = 1065

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 24/182 (13%)

Query: 201 KSGLKDLSL--SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           K  L++ SL  + K F+    +  DP  ++  W  +    L+  G+ D+ D  K  F+P 
Sbjct: 554 KEALEEASLKFAGKKFE----MSQDPD-VLDTWFSSGLFPLSVLGWPDDTDDLKT-FYPT 607

Query: 259 DLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
            +   G DIL F    W A +      L  ++P  +KV+ H  I    G K+SKSLGNVI
Sbjct: 608 SVLETGHDILFF----WVARMVMLGITLRGDVPF-RKVYLHPMIRDAHGRKMSKSLGNVI 662

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI  + ++ L   L        +    KDG KK    D  NGI    + ++   L 
Sbjct: 663 DPLEVINGINLEGLHKRLEEGNLDPNELVTAKDGQKK----DFPNGIAECGADALRFALV 718

Query: 372 DY 373
            Y
Sbjct: 719 SY 720


>gi|116617750|ref|YP_818121.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272049|sp|Q03YH4|SYL_LEUMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116096597|gb|ABJ61748.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 808

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 26/205 (12%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+EK Y+     YP+ Q  H+GH       D+++R+ R  G +VL   G D  G    + 
Sbjct: 29  EKEKYYVMDMFPYPSGQGLHVGHPEGYTATDIMSRYKRAKGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F ++N + F++    L  S D    I TT+  ++   + +++K+ +KG  
Sbjct: 89  AIKTGNNPAGFTNKNVQVFKNQIKSLGFSIDWSREINTTDPEYYKWSQWIFEKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA----------DGQYYNAQHNPVQWMEEEGYFFRL 169
           Y+          DE   N    + G           DG+     + PV     + +  R+
Sbjct: 149 YE----------DEIMVNWAPDFPGGGIVVANEEVIDGKTERGGY-PVYRKPMKQWVLRI 197

Query: 170 SAYQDKLLSYYE--SHPEFILPIER 192
           +AY D+LL   E    PE I   +R
Sbjct: 198 TAYADRLLEDLEDLDWPEAIKEQQR 222



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W   DL+V G +    H +Y   W  FL    +   K+ F    + G IL + 
Sbjct: 518 DPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGEN 577

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P E++   G D LR + +      +   + +DG+         +G  
Sbjct: 578 HEKMSKSKGNVVNPDEIVNNYGADTLRVYEMFMGPLTQSKPWSEDGV---------SGSR 628

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +++ + D +        + D  +  +  + ++++ E+++N   + A++Q++ 
Sbjct: 629 RWLDRVWRLLVDEEDKLRDHVTTVNKGD--LDKIYHQTVKKVSEDLENMRFNTAISQLMV 686

Query: 420 LVSEV 424
            V+E 
Sbjct: 687 FVNEA 691


>gi|325958696|ref|YP_004290162.1| Valyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330128|gb|ADZ09190.1| Valyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 887

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    +   G+   P+     ++PADL   G DI+R  A Y       L+ + 
Sbjct: 455 VLDTWMDSSITPMVIAGW---PEPEYKNYFPADLRPQGHDIIRTWAFYTILRCKALTDSR 511

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNVI P  V+EE G DA+R +    +  G D  +D  
Sbjct: 512 PFDRIVINGMVFGEDGHKMSKSRGNVIAPEAVVEEYGADAMRLWSANSVP-GSDVPFDW- 569

Query: 345 GLKKRVNADLANGIGNL-----VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                   D+ NG   L       R ++M + +YD            D  ILS  + +++
Sbjct: 570 -------KDVKNGYKFLRKFWNAFRFINMHIANYDVDNVEFNIRNPMDRWILSKLNYLVE 622

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
           ++  ++ N     A  ++ + V     D Y +A K
Sbjct: 623 DVTNHLNNYNFADARNKIQAFVWHDFCDEYIEAVK 657



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          R +  I T   YP    HIGH       D++AR+ R++G DV+F  G D HG
Sbjct: 36 RPRYIIDTPPPYPTGSIHIGHVLNWTFIDIIARYMRMNGYDVMFPQGWDCHG 87


>gi|309389593|gb|ADO77473.1| leucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 831

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 110/235 (46%), Gaps = 28/235 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKS 306
           +++P D ++ G +    H +Y   F        L+ ++       + G +L  G K+SKS
Sbjct: 530 QWFPVDQYIGGIEHAILHLLYARFFTKVVYDMDLTEHVEPFTNWLAQGMVLKDGAKMSKS 589

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD-LANGIGNLVSRS 365
            GNV+DP ++++E G D  R F++      KD  +   G++    AD   N +   V+ +
Sbjct: 590 KGNVVDPKDILDEYGADTARLFILFAAPPEKDLEWSDKGVE---GADRFLNRVWRFVTEN 646

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           + +I KD +  + +        +++       ++++ E++ ++L  + A++ ++ L +EV
Sbjct: 647 LELI-KDTNSKLES-SKLDPDAKALYRTMHASIKKVSEDIGSRLNFNTAISSIMELTNEV 704

Query: 425 DRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             Y +            DR+S  T   +   V   L +LL  F P +  +++++L
Sbjct: 705 YSYLN------------DRSSEETNAPLIKAVAENLVLLLAPFAPFITEELWELL 747



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 19/184 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           +E  Y+     YP+   H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KENYYVLEMFPYPSGNLHMGHVRVYSIGDVIARYKRMKGYNVLHPMGWDAFGLPAENAAI 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           ++  +  K +   N  + ++    + +SY  D  + T  + ++   +  + ++ +    Y
Sbjct: 92  KHGNIHPKEWTWDNIAHMKEQMKAMGLSYDWDHEVTTAAEDYYKWTQWFFTQMFNDDLAY 151

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           K       C S    L +E   ND     G +          V   + E +F +++ Y D
Sbjct: 152 KKESTVNWCPSCETVLANEQVVNDACERCGTE----------VDLRDLEQWFLKITDYAD 201

Query: 175 KLLS 178
           +LL+
Sbjct: 202 RLLA 205


>gi|254715125|ref|ZP_05176936.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261216834|ref|ZP_05931115.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|260921923|gb|EEX88491.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 950

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 573 ILDVWFDSGSTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 626

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G+K+SKSLGN + P +VI+E G D LR +++
Sbjct: 627 PY-NAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVM 672



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG     K
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIRT----------TEKRHHDT 105
           I +  + AG    +V +++  +  R+ A + + +  ++F R           T    H  
Sbjct: 111 IEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 171 ARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEV 208


>gi|194866776|ref|XP_001971943.1| GG15248 [Drosophila erecta]
 gi|190653726|gb|EDV50969.1| GG15248 [Drosophila erecta]
          Length = 870

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 25/190 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA 
Sbjct: 61  KDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y+
Sbjct: 121 QRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W             +F R SA
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLRQWFIRTSA 227

Query: 172 YQDKLLSYYE 181
           Y  +LL   E
Sbjct: 228 YAKQLLDGLE 237


>gi|260463256|ref|ZP_05811457.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030846|gb|EEW32121.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 989

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + ++ T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 587 ILDVWFDSGSTHVFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 640

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V +HGF + + G K+SKSLGN + P +VI++ G D LR ++V         +++ 
Sbjct: 641 PY-DTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVV------TTDYWED 693

Query: 344 DGLKKRV---NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             L K V   N D    + N V   +  +  D    +P   A  E +  +L   S + + 
Sbjct: 694 QRLGKNVLQTNIDAYRKLRNTVRWMLGTLAHDDGENVPLE-AMPELERLMLHRLSELDEV 752

Query: 401 IREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +R+     + + I RAL   + +V     YFD +K   L    P  +S     +V+V+R 
Sbjct: 753 VRQGYDAFEFKRITRALIDFM-VVELSAFYFDIRKD-ALYCDAP--SSAKRKASVQVVRH 808

Query: 458 L-AILLQAFVPKL 469
           L   L++   P L
Sbjct: 809 LFDCLVKWLAPML 821



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  RTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSNYVPGWDCHGLPI 108


>gi|254976114|ref|ZP_05272586.1| leucyl-tRNA synthetase [Clostridium difficile QCD-66c26]
          Length = 780

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA
Sbjct: 31  EKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  Y
Sbjct: 91  IKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K  Y  W     E    +++V +GA           V   + E ++F+ + + ++LL+
Sbjct: 151 KKKSYVNWCP-SCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLN 204



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 99/230 (43%), Gaps = 30/230 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS G
Sbjct: 514 PVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKSKG 572

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N + P+++I+E G D  R F++      +D  + + G+         N +  LV     +
Sbjct: 573 NTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELADV 630

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRY 427
           + KD +      G     D+ +       L+++  ++  +   + A++ ++ L++++ +Y
Sbjct: 631 VKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKY 685

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  EL   N         V  E ++ +  ++  F P L  +++ ++
Sbjct: 686 K------ELDNINE-------AVIKEGVQTIVTIIAPFAPHLGEELWTMI 722


>gi|225850238|ref|YP_002730472.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
 gi|259511511|sp|C0QP76|SYI_PERMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225645021|gb|ACO03207.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
          Length = 947

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 12/111 (10%)

Query: 227 IMYVWIDALTNYLTT--TGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+  ++ +   +G+ D         WPAD+++ G D  R  F +          
Sbjct: 536 ILDVWFDSGVSHASVLKSGFWDELK------WPADMYLEGSDQHRGWFQSSLLEGVASYG 589

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             P    V +HGFIL  KG K+SKSLGNVI P ++I+  G D LR ++V E
Sbjct: 590 RAPY-DAVLTHGFILDEKGNKMSKSLGNVIPPEKIIKMYGADILRLWVVSE 639



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   H+GHA   I+ D+L ++  + G D  F  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGNIHLGHALNKILKDILVKYESMKGKDAPFVPGWDCHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKR 101
            +      K   +  S++ FR +     + Y +  R   KR
Sbjct: 105 VEKLLKKEKKRKEDLSKSEFRKLCREYALKYVNIQREEFKR 145


>gi|255348662|ref|ZP_05380669.1| valyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503202|ref|ZP_05381592.1| valyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506880|ref|ZP_05382519.1| valyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 939

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597


>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819763|sp|Q5L0V9|SYI_GEOKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 924

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLVERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF+L  +G K+SKSLGNV+ P +V+E+ G D LR ++ 
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQFGADILRLWVA 621



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 18/156 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTKVF----------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
               GV  K                  +D   R F+ +    D  +D+   T +  +   
Sbjct: 105 LAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGD--WDNPYITLKPEYEAQ 162

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              ++ +++ KG IYKG    ++S   E+   + E+
Sbjct: 163 QIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198


>gi|260774879|ref|ZP_05883780.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609134|gb|EEX35292.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 857

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L + YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNNTAPAPWTYENIEYMKNQLKMLGLGYDWNREFATCTPE-YYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K   +  +   D+    +++V    DG+ + +    V+  E   +F +++ Y  +L   L
Sbjct: 151 KKMSTVNWDPVDQTVLANEQV---VDGRGWRSGA-IVEQKEIPQWFIKITEYAQELIDDL 206

Query: 178 SYYESHPEFILPIER 192
              +  PE +  ++R
Sbjct: 207 DKLDGWPEMVKTMQR 221


>gi|238028413|ref|YP_002912644.1| isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877607|gb|ACR29940.1| Isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 945

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A ++    P  K + +HGF +  +G K+SKSLGN IDP
Sbjct: 575 PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY-KALLTHGFTVDGEGRKMSKSLGNGIDP 633

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV   +G + +R ++      G+    ++  + KRV       I N + R +   L D+
Sbjct: 634 HEVSNRLGAEIVRLWIASTDYSGELAISEE--ILKRVTEGYRR-IRNTL-RFLLANLSDF 689

Query: 374 D-GMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           D      P A + E D   ++  +++  E+  + +    H  +A++ +  SE     Y D
Sbjct: 690 DYAKDALPAAEWLEIDRYAIAFSAQLQAELLAHYERYEFHPIVAKLQTYCSEDLGGFYLD 749

Query: 430 AQKPWELKKTNPDRAS-----TVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
             K   L  + PD A+     T LY VT  ++R LA  L +F  + A K+F
Sbjct: 750 VLKD-RLYTSAPDSAARRSAQTALYHVTQGLLRVLAPFL-SFTAEEAWKVF 798



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|225075658|ref|ZP_03718857.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
 gi|224953080|gb|EEG34289.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 39/275 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       G+     + 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISRE- 646

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQE 400
            + KRV           +  ++S +  +     P   A  ++D    +    V +R LQE
Sbjct: 647 -ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARQLQE 700

Query: 401 --IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVL 448
               +       H A+ +++S  SE           DR +  +     +++    A T L
Sbjct: 701 RLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSHARRS----AQTAL 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y    + R L +L+   +     + +DI+   +E+
Sbjct: 757 Y---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|198275860|ref|ZP_03208391.1| hypothetical protein BACPLE_02035 [Bacteroides plebeius DSM 17135]
 gi|198271489|gb|EDY95759.1| hypothetical protein BACPLE_02035 [Bacteroides plebeius DSM 17135]
          Length = 892

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 34/288 (11%)

Query: 207 LSLSR-KTFDWGIKIPDDPQY--IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLH 261
           L L++ KT D  +K+ D  Q    +  W  +    ++    ++NP   + K++   ADL 
Sbjct: 450 LELAKEKTGDANLKMEDLRQEDDCLDTWFSSWLWPISLFDGINNPGNEEIKYYYPTADL- 508

Query: 262 VIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314
           V G DI+ F    W A ++ A      ++P  + V+  G +  K G K+SKSLGN  DP+
Sbjct: 509 VTGPDIIFF----WVARMIMAGYEYMGDMPF-RNVYFTGIVRDKIGRKMSKSLGNSPDPL 563

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+IE+ G D +R  ++     G D  +D+   ++  N    N I N         + D  
Sbjct: 564 ELIEQFGADGVRMGMMLAAPAGNDILFDEALCEQGRN--FNNKIWNAFRLVKGWQVAD-- 619

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             I  P     + E   S+ ++  +E+ +      +  AL  V  L      ++D    W
Sbjct: 620 --IEQPEYAKLATEWFDSMLAKTAEEVNDLFGKYRLSEALMAVYKL------FWDEFSSW 671

Query: 435 ELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
            L+   P     +  VT E        L  LL  F+P +  +++  ++
Sbjct: 672 YLEMVKPAYGQPIDKVTYEKTLAFFETLLKLLHPFMPFITEELWQHIY 719


>gi|109946907|ref|YP_664135.1| leucyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066333|sp|Q17YZ0|SYL_HELAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109714128|emb|CAJ99136.1| leuS [Helicobacter acinonychis str. Sheeba]
          Length = 806

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D L R++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N  N +   + L  S+  +    T++  + +  +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPNYTEFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    +G+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IEGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 36/221 (16%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   +L  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYIDLDEPFKQLITQGMVLKDGVKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIG-- 359
           GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I   
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAINPT 636

Query: 360 ---------------NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
                           L  + V   LK    +   P + T +  ++++ C   L  +  N
Sbjct: 637 TYKPEFKEANLNEAEKLARKKVYEALKKSHEIFNNPES-TYAFNTLIASCMEALNAL--N 693

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            QN    R L +   ++ +V         WEL +    RA+
Sbjct: 694 TQNN--ERILCEGYFVLLQVLEPMIPHTAWELSERLFKRAN 732


>gi|297624343|ref|YP_003705777.1| leucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165523|gb|ADI15234.1| leucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 835

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 23/190 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           ++E  Y  T   YP+   HIGH Y   I D  ARF R+ GL+VLF  G D  G       
Sbjct: 44  DQEPFYYLTMFPYPSGDLHIGHWYAFSIPDAYARFKRMRGLNVLFPMGFDAFGLPAENAA 103

Query: 59  AKAAQNAG-----VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
            KAA+  G       T   +    R F  M    D S    + T +  ++   ++ + ++
Sbjct: 104 IKAARQGGSVHPATLTYERMAHMERQFAKMGASFDWSKK--VVTCDPGYYRWNQLFFLRM 161

Query: 114 SDKGDIY-KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRL 169
            ++G  Y K  +  W  + D+    +++V  G     G     +  P QW       F++
Sbjct: 162 LERGLAYRKASFVNWDPV-DQTVLANEQVVNGRGERSGALVERRLMP-QW------HFKI 213

Query: 170 SAYQDKLLSY 179
           +AY ++LL +
Sbjct: 214 TAYAEELLDF 223



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 89/188 (47%), Gaps = 24/188 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  +A+ W P D +  G +    H +Y   F         +  + P  K++ + G IL +
Sbjct: 540 DRQRARRWTPVDQYTGGIEHAILHLLYARFFTKVLRDLGFVDVDEPF-KRLRNQGMILGE 598

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNV++P +++ E G D +R +L+        G +   G++         G+
Sbjct: 599 DNEKMSKSRGNVVNPDDLVAEYGADTVRAYLMFIGPWEAGGPWSSTGIE---------GV 649

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R  +++ +  +      G   E+ +++       ++E+ E+++    + A+A+++
Sbjct: 650 ARFLNRVWALLTEPVEAT----GGDPETRKALRRAVHHAIKEVTEDLEAFGFNTAVAELM 705

Query: 419 SLVSEVDR 426
           +L + + R
Sbjct: 706 TLTNAMSR 713


>gi|313124236|ref|YP_004034495.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280799|gb|ADQ61518.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325685746|gb|EGD27823.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 804

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G          +G+   + R  
Sbjct: 578 RGNVVNPDDVIDEYGADSLRTYEMFMGPLNASIDWDDNG---------PSGVKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              + D D   IP+     ++D  +  + +  ++ + E+ +    + A++Q++  ++   
Sbjct: 629 RTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVKTVTEHFEELRFNTAISQMMVFMNACQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDKNIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKG 122
           Y+ 
Sbjct: 148 YEA 150


>gi|262201990|ref|YP_003273198.1| valyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085337|gb|ACY21305.1| valyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 884

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 126/326 (38%), Gaps = 58/326 (17%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ D       KF+P  + V G DIL     +W A ++      
Sbjct: 453 VLDTWFSSGLWPFSTLGWPDQT-ADLEKFYPTSVLVTGYDIL----FFWVARMMMFGTYV 507

Query: 281 ------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                  A +P    +F HG +  + G K+SKS GN IDP++ ++  G DALR+ L R  
Sbjct: 508 GNDLGPDAKVPF-GNLFLHGLVRDEHGRKMSKSKGNGIDPLDWVQRFGADALRFTLARGA 566

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G D    +D      N   A  + N  +   +++     G +P+    T  D  IL  
Sbjct: 567 NPGSDISVGEDHASSSRN--FATKLFN--ATKFALMNGARVGDLPSADELTAVDRWILGR 622

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
              VL E+    ++    +A   +     +   D Y +  K  +  + +  R+ T   V 
Sbjct: 623 LDEVLAEVDAGFESYEFSKACESLYHFAWDEVCDWYLELAKV-QFAEGDEKRSETTRLVL 681

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI------LFVAD------------------------ 481
             V+  L   L   +P +   ++        L VAD                        
Sbjct: 682 GAVLDPLLRALSPVMPFVTEVLWKALTGGPSLVVADWPAVSARVGDEQATAVVDDLQRLI 741

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPI 506
            E R F+S DQ L+PG  +  TF+ +
Sbjct: 742 TEIRRFRS-DQGLQPGQRVAATFEQL 766



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 24/142 (16%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----- 55
           E +K   S  I  PN     H+GHAYE ++ D L+R  R+ G +VL+  G D        
Sbjct: 41  ESDKPAFSIVIPPPNVNGSLHMGHAYEHVLMDALSRRRRMQGYEVLWLPGMDHAAIAMQT 100

Query: 56  ---QKIAKAAQN------AGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEK 100
              +K+A   +            +V+ ++           R + D +D S + F  T ++
Sbjct: 101 MVERKLADEGKTRDDLGREAFIERVWAEKAEIGGNIGEQMRRLGDGVDWSRERF--TMDE 158

Query: 101 RHHDTCRILWKKISDKGDIYKG 122
                 + ++KK+ D G IY+ 
Sbjct: 159 GLSRAVQTVFKKMFDDGLIYRA 180


>gi|152967451|ref|YP_001363235.1| valyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361968|gb|ABS04971.1| tRNA synthetase valyl/leucyl anticodon-binding [Kineococcus
           radiotolerans SRS30216]
          Length = 877

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 15/187 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           +M  W  +    L  +G+  + D   ++ +P DL   G+DI+R   F  +   + L    
Sbjct: 525 VMDTWATSSLTPLLVSGWERDED-LFSRVYPMDLRPQGQDIIRTWLFSTVV-RSHLEFGG 582

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           LP  +   S   +    +K+SKS GNV+ P+ ++EE G DA+RY+       G D  +D 
Sbjct: 583 LPWARTALSGWILDPDRKKMSKSKGNVVTPLALLEEFGSDAVRYWAASS-RLGTDATFDT 641

Query: 344 DGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQE 400
             +K  +R+   L N    ++   V        G    P A TE+ D S+L+  + V+++
Sbjct: 642 GQMKIGRRLAMKLLNASKFVLGLGVER------GTAADPAAVTEAVDASVLADLAVVVRQ 695

Query: 401 IRENMQN 407
             E  + 
Sbjct: 696 ATEAFER 702



 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 22/107 (20%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  +Y I T     +   H+GH +     DV+ARF R+ G  V +  G D++G    + 
Sbjct: 54  ERADVYSIDTPPPTVSGSLHVGHVFSYTHTDVVARFQRMRGKSVFYPMGWDDNGLPTERR 113

Query: 62  AQN---------------------AGVTTKVFVDQNSRNFRDMADVL 87
            QN                     A  + + FV  + RNF ++ D L
Sbjct: 114 VQNYYGVRCDPTLPYDASFVPPEKAPKSDRDFVQVSRRNFVELCDRL 160


>gi|146284080|ref|YP_001174233.1| leucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145572285|gb|ABP81391.1| leucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 906

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 70  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAAM 129

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 130 KNQVAPAKWTYENIAYMKAQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 189

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL
Sbjct: 190 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELL 241


>gi|87119373|ref|ZP_01075271.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165764|gb|EAQ67031.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 818

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 46/244 (18%)

Query: 252 KAKFW-PADLHVIGKD--ILR------FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +  IL       FH +   A L+++N P  K++ + G +   G K
Sbjct: 519 EANYWLPVDQYIGGVEHAILHLLYARFFHKLLRDAGLVTSNEPF-KRLLTQGMVNKDGTK 577

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNADLA- 355
           +SKS GN +DP E+IE+ G D +R F++      + +     G        +R+ A LA 
Sbjct: 578 MSKSKGNTVDPQEMIEKYGADTVRLFIMFTAPPEQSLEWNDAGVDGSSRFLRRLWA-LAY 636

Query: 356 --NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             N  G +     S +  D   +        ++ E+I  V   +        + Q  + A
Sbjct: 637 RHNNAGTVGKLDTSKLTSDQKAL------RRKTHETIAKVTDDI-------ERRQTFNTA 683

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A ++ L +E+ +Y              D++   L V  E +    + L   VP +++++
Sbjct: 684 IAALMELCNEISKY-------------EDKSELGLAVEQEALEAATLCLSPIVPHISHEL 730

Query: 474 FDIL 477
           +  L
Sbjct: 731 WGAL 734



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +D    L   Y  D  I T    ++   +  + ++ +KG  YK
Sbjct: 92  KHKTAPAKWTKENIAYMKDQLKQLGFGYDWDREIATCTPEYYRWEQWFFTQLVEKGMAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA 145
              +  +   D+    +++V  G 
Sbjct: 152 KTSAVNWCPNDKTVLANEQVEDGG 175


>gi|319945678|ref|ZP_08019929.1| leucine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748038|gb|EFW00281.1| leucine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 833

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|319956864|ref|YP_004168127.1| valyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419268|gb|ADV46378.1| valyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 877

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 12/105 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKS 306
           +F+P  L + G DIL F    W A +L      +  LP P  V+ H  +   KGEK+SKS
Sbjct: 487 EFYPNSLLITGFDILFF----WVARMLMMGEKLTGELPFPH-VYLHALVKDEKGEKMSKS 541

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            GNVIDP+ +I++   DALR+ L      G+D    ++ L++  N
Sbjct: 542 KGNVIDPLVMIDKYSADALRFTLAVLAVQGRDIRLSEEKLEQSRN 586



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 22/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAKAAQNAGVTTKV 71
           HIGHA    + D++ R+ R+DG   L+  GTD  G         Q + +      +  + 
Sbjct: 57  HIGHALTFTLQDIIVRYKRMDGYKTLWQPGTDHAGIATQNVVEKQLLEQGKTKEEIGREA 116

Query: 72  FVD------QNSRN-----FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F++      +NS N      R +      S + F  T ++   +  +  +KK+ D+G I 
Sbjct: 117 FLELAWKQKENSGNAITAQLRRLGVSPAWSRERF--TMDEGLANAVKHAFKKMYDEGWIV 174

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
           +G Y   +   D A  + +  Y+  +G+ Y
Sbjct: 175 QGNYMINWCTHDGALSDIEVEYEEHEGKLY 204


>gi|315928006|gb|EFV07326.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 516

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196


>gi|226331014|ref|ZP_03806532.1| hypothetical protein PROPEN_04944 [Proteus penneri ATCC 35198]
 gi|225201809|gb|EEG84163.1| hypothetical protein PROPEN_04944 [Proteus penneri ATCC 35198]
          Length = 606

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++    L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYENINYMKNQLKKLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D     +++V    DG  +     PV+  E   +F +++ Y ++LL+
Sbjct: 152 KTSAVNWCPHDLTVLANEQV---IDGCCWRCD-TPVERKEIPQWFIKITDYAEELLN 204


>gi|167997889|ref|XP_001751651.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697632|gb|EDQ83968.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 753

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 102/520 (19%), Positives = 196/520 (37%), Gaps = 129/520 (24%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           ++ ADV AR+ R  G +V++  GTDE G      A   G+T +   D+      D+ +  
Sbjct: 20  VLSADVYARYCRRQGYNVVYMCGTDEFGTATKTKAMEEGLTPREICDKYHAIHEDIYEWF 79

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV------ 141
           DI +D F RT   +  +  + ++  + +K  + +      Y      +  D  V      
Sbjct: 80  DIDFDKFGRTATPQQTEIAQSIFMSLYEKKRLNENTMIQPYCTTCSRFLADRLVEGTCPT 139

Query: 142 ----YKGAD-------GQYYNAQ----------HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
               Y+ A        G+  NA            N  +    +  F  L    D+L  Y 
Sbjct: 140 PGCGYEDARGDQCDLCGKLLNADDLISPRCKVGGNTPEKRPTDHLFLDLPGLNDQLQQYI 199

Query: 181 ESHPEF----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMY----- 229
            +  +        I++ N   ++++ GLK+  ++R    WG+ +P +   Q +++     
Sbjct: 200 TNTLKTGGWSSNSIQQTN---AWIRDGLKERCITRD-LKWGVPVPLEKYKQKVIFPCTLL 255

Query: 230 ----VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
                W   L   ++ T YL+   G  +K     + V G D+             S N+P
Sbjct: 256 GTEDSW--TLMKAISVTEYLNYESGKFSK--SRGVGVFGNDV------------KSTNIP 299

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           +  +V+ +  ++++ E +S +L   +D                                 
Sbjct: 300 V--EVWRYYLLINRPE-VSDTLFTWVD--------------------------------- 323

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKD--------YDGMIPTPGAFTE-----SDESILS 392
           L+ + N +L   +GN V R++S + K           G+    G F       S  ++  
Sbjct: 324 LQAKQNNELLKNLGNFVHRTLSFLAKPSVFVSYKIVSGISIRSGGFASLTTYISKMTVEY 383

Query: 393 VC-----SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP-------------W 434
           VC      +V+ E+    + +L  +   +V   + E  +  +A K              W
Sbjct: 384 VCREGGYRKVIPEVGNPEEYELTKKLALKVKGTIDEYIKCMEAVKLKTGLKAAMEESQFW 443

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +L K +    S +L  ++ ++  LAILL+ F+P  ++K+ 
Sbjct: 444 KLYKKDKPACSILLKTSIGLVHLLAILLEPFMPSFSHKVL 483


>gi|146329527|ref|YP_001209014.1| isoleucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166200205|sp|A5EWT0|SYI_DICNV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146232997|gb|ABQ13975.1| isoleucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 924

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 16/129 (12%)

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIG 264
           D  LS K  D   K+ D    ++ VW D+ T + +           +A+  +PADL++ G
Sbjct: 514 DTLLSGKEVDRYEKLND----VLDVWFDSGTTHYSVLK-------KRAELSYPADLYLEG 562

Query: 265 KDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321
            D  R  FH+    A  ++   P  K + +HGF + + G K+SKSLGNV+DP +VI+ +G
Sbjct: 563 SDQHRGWFHSSLLTASAITGKPPY-KALLTHGFTVDEDGRKMSKSLGNVVDPNQVIKTLG 621

Query: 322 VDALRYFLV 330
            D LR ++ 
Sbjct: 622 ADILRLWVA 630


>gi|313206180|ref|YP_004045357.1| valyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445496|gb|ADQ81851.1| valyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336375|gb|ADZ12649.1| Valyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 872

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 27/241 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH 298
           L NP+  +  ++ P    V G DI+ F    W A ++ A L     +P K V+  G +  
Sbjct: 474 LLNPNSKEINYYYPTTDLVTGPDIIFF----WVARMIMAGLEWRGKVPFKNVYFTGIVRD 529

Query: 299 KGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K   K+SKSLGN  DPIE+I++ G D++R  ++   A G D  +D+D + +  N   A  
Sbjct: 530 KQRRKMSKSLGNSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQGRN--FATK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N    +  ++        P      ++ E    +  + ++EI E  +   I  AL  +
Sbjct: 588 IWN----AFRLVQGWKQENKPAGAVENQTIEWFGHLLDKTVKEINEQFEKFRISDALHLI 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             L+      +D    W L+   P+     +  V   T+    +L  LL  F+P L  ++
Sbjct: 644 YKLI------WDDFCSWYLEAIKPNYGEGISKEVYDKTIAYFEELMKLLHPFMPFLTEEL 697

Query: 474 F 474
           +
Sbjct: 698 W 698


>gi|290968885|ref|ZP_06560422.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781181|gb|EFD93772.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 826

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+     YP+   H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 31  RPPYYVLEMFPYPSGNLHMGHVRNYTIGDVMARYRRMKGFNVLHPMGYDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N  N       L +SY  D  + T  + ++   + +++    +G  Y 
Sbjct: 91  KHNIPPAEWTYKNIENMTRQQRELGLSYDWDREVATCHEEYYKWTQWIFELFYKRGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W    +    N+  +    DG  +     PV   + + +FF+++ Y D+LL
Sbjct: 151 KEAKVNWCEHCNTVLANEQVI----DGTCWRCDQ-PVVKKDLKQWFFKITDYADQLL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 23/202 (11%)

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A L++   P  +++ + G +L  G K+SKS GNV+ P ++I + G D  R F++      
Sbjct: 557 AGLVAVKEPF-ERLLTQGMVLMDGSKMSKSKGNVVSPEDIIAKYGADTGRLFILFAAPPE 615

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILS 392
           +D  + + G++         G    + R V  I++ Y  M+ T       +TE+++++  
Sbjct: 616 RDLEWSEQGVE---------GSYRFLHR-VWRIVEQYMDMLDTAETAKRPYTEAEKALRR 665

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
                + ++ E++Q +    +    +S + E   Y +A   +  K+    +      V V
Sbjct: 666 QEFLSIAKVGEDIQGRDGKYSFNTAVSSIME---YVNALYAYAGKEKTIQKE-----VGV 717

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
           E IR L  +L  F P +A +++
Sbjct: 718 EAIRNLLKILAPFTPHIAEELW 739


>gi|281358414|ref|ZP_06244895.1| leucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315037|gb|EFA99069.1| leucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 851

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D++ R+ R+ G +VL   G D  G    + 
Sbjct: 31  DKPKYYVLDMFPYPSGAGLHVGHPEGYTATDIICRYRRMKGDNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V   +N  NFR     L  SY  D  I TT+  +    + ++ ++  KG  
Sbjct: 91  AVETGTHPEVTTQKNVDNFRRQIKSLGFSYDWDREINTTDPGYFKWTQWIFMQLHKKGLA 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+    + +  R++ Y ++LL
Sbjct: 151 YLDEVAVNWCPALGTVLANEEVI----DGRSERGNH-PVERRPMKQWMLRITEYAERLL 204


>gi|15622274|dbj|BAB66266.1| 742aa long hypothetical valyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 742

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 20/255 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    +  TG+  +    +  F PA + + G DI+R    Y  +   +L+ N+P  
Sbjct: 406 VWIDSSVTVIYLTGFYTDKRKFEKTF-PASVRLQGTDIIRTWLFYTFFRTLVLTGNIPF- 463

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V  +G +L   G ++SKS GNV++P++ ++E G D++R  L+ +   G D  +  + +
Sbjct: 464 KEVLINGQVLGPDGTRMSKSKGNVVNPLDKVDEFGADSIRLTLL-DARIGDDFPFKWETV 522

Query: 347 KKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
             R    L   + N    S   I  K +D     P      D  IL    R +++  E  
Sbjct: 523 --RGKKLLLQKLWNAGRLSYPFIGKKKFD----RPSNLHPIDRWILQEHKRFVKKSIEAY 576

Query: 406 QNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            N   ++ +  + S   E   D Y +      +K        + LY    V + L I+L 
Sbjct: 577 NNYDFYQVVESLYSYFWETIADEYLEL-----IKHRLFAEDLSALYTLSRVFKDLLIILH 631

Query: 464 AFVPKLANKIFDILF 478
              P +  ++++ L+
Sbjct: 632 PIAPHITEEMYNRLY 646



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 22 IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +GHAY + IAD + RF RL G +VL   G D  G
Sbjct: 1  MGHAYWVTIADTIGRFKRLQGYNVLLPQGWDTQG 34


>gi|305663610|ref|YP_003859898.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378179|gb|ADM28018.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 979

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          + K +I+ A  YPN   HIGH    +IAD++ARF RL G +VLF  G    G  I   A+
Sbjct: 35 KSKYFITAAFMYPNGPIHIGHGRTYLIADIIARFKRLQGYNVLFPMGFHYTGTPIIAMAE 94



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 16/103 (15%)

Query: 255 FWPADLHVIGKDILRFH---------AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           ++P DL V GKD++  H         AIY  AF        P+ + ++G++L K +K+SK
Sbjct: 598 WYPLDLRVSGKDLIPNHLTFFIFNHVAIYPKAFY-------PRGIIANGWVLIKQQKMSK 650

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           S  N+I    +IEE G D +R  L       +D   D D LK+
Sbjct: 651 SARNIIPLKNLIEEYGSDIVRLLLALGAEVYQDENIDPDLLKR 693


>gi|300690442|ref|YP_003751437.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
 gi|299077502|emb|CBJ50128.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
          Length = 877

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCNPDYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELLS 210


>gi|21674468|ref|NP_662533.1| leucyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|48428547|sp|Q8KBY2|SYL_CHLTE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21647656|gb|AAM72875.1| leucyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 807

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +E+ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    +
Sbjct: 28  QEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  ++N  +FR+    +  SYD    I TT+  +    + ++ K+ +KG 
Sbjct: 88  FAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREINTTDPNYFKWTQWIFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y       W         N++   K ADG  Y     P+ QW+       +++AY ++L
Sbjct: 148 AYISEVDVNWCEELKVVLANEEVDEKIADG--YTVVRRPLRQWV------LKITAYAERL 199

Query: 177 L 177
           L
Sbjct: 200 L 200



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 42/243 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D S  ++W   DL++ G +    H +Y   W   L     +S   P  +++F+ G IL +
Sbjct: 514 DPSLEQYWMNVDLYIGGAEHAVLHLLYSRFWHKVLYDLGVVSTKEPF-QRLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V+   G DALR +         + F       K  N     GI
Sbjct: 573 DNEKMSKSRGNVIPADHVLSTYGADALRLY---------EMFLGPLDQVKPWNTHGIEGI 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +++   ++  +      T     +  E+IL    + ++++ E+ +    + A+++++
Sbjct: 624 SRFLNKVWRLVWDENTETQKT--TEDKPSEAILKRMHKAIKKVTEDTEQLKFNTAISEMM 681

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            LV+E+ +                        + E    L +LL  F P +  +++  L 
Sbjct: 682 VLVNELHK--------------------AGCYSRETTETLLVLLSPFAPHITEELWQALG 721

Query: 479 VAD 481
            A+
Sbjct: 722 HAE 724


>gi|315023136|gb|EFT36149.1| Valyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 872

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 27/241 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH 298
           L NP+  +  ++ P    V G DI+ F    W A ++ A L     +P K V+  G +  
Sbjct: 474 LLNPNSKEINYYYPTTDLVTGPDIIFF----WVARMIMAGLEWRGKVPFKNVYFTGIVRD 529

Query: 299 KGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K   K+SKSLGN  DPIE+I++ G D++R  ++   A G D  +D+D + +  N   A  
Sbjct: 530 KQRRKMSKSLGNSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQGRN--FATK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N    +  ++        P      ++ E    +  + ++EI E  +   I  AL  +
Sbjct: 588 IWN----AFRLVQGWKQENKPAGAVENQTIEWFGHLLDKTVKEINEQFEKFRISDALHLI 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             L+      +D    W L+   P+     +  V   T+    +L  LL  F+P L  ++
Sbjct: 644 YKLI------WDDFCSWYLEAIKPNYGEGISKEVYDKTIAYFEELMKLLHPFMPFLTEEL 697

Query: 474 F 474
           +
Sbjct: 698 W 698


>gi|224534306|ref|ZP_03674884.1| leucine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514408|gb|EEF84724.1| leucine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 840

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+ AR+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFARYKILNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|103488497|ref|YP_618058.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123078012|sp|Q1GNP7|SYL_SPHAL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|98978574|gb|ABF54725.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 849

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 12/180 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI     YP+ + H+GH     + DVLARF R+ G DVL   G D  G     AA
Sbjct: 33  QKPKAYILEMFPYPSGRIHMGHVRNYAMGDVLARFKRMTGHDVLHPMGWDAFGMPAENAA 92

Query: 63  QNAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV     T+  +D      + +   +D S +  + T E  ++   + L+  +   G 
Sbjct: 93  MEKGVHPGGWTRANIDAMRAQLKRLGLAIDWSRE--LATCEPDYYGQEQALFLDLHAAGL 150

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +Y K  Y  W  +      N+  +    DG+ + +    V+  +   +F +++ + D+LL
Sbjct: 151 VYRKESYVNWDPVDMTVLANEQVI----DGRGWRSGAL-VEKKKLSQWFLKITDFADELL 205


>gi|327482397|gb|AEA85707.1| leucyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 868

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNQVAPAKWTYENIAYMKAQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 Y---YESHPEFILPIER 192
                +  PE +  ++R
Sbjct: 205 SLDELDGWPEQVKTMQR 221


>gi|195587864|ref|XP_002083681.1| GD13863 [Drosophila simulans]
 gi|194195690|gb|EDX09266.1| GD13863 [Drosophila simulans]
          Length = 869

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 25/190 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA 
Sbjct: 61  KDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y+
Sbjct: 121 QRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W             +F R SA
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLRQWFIRTSA 227

Query: 172 YQDKLLSYYE 181
           Y  +LL   E
Sbjct: 228 YAKQLLDGLE 237


>gi|12585346|sp|O58052|SYV_PYRHO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 891

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  +AK W     P  L   G DI+R  A Y     +
Sbjct: 453 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 VLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTAL-APPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D+ ILS   R++
Sbjct: 572 HPFKWETVD--YNYRFLQKVWN-IYRFAERHIKDFDYEKYRDVELEPLDKWILSRLHRII 628

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++I+ +     D Y +  K + L   + +          E++ 
Sbjct: 629 KFATEELERYRFNLITRELITFIWHEVADDYIEMIK-YRLYGEDEESKLKAKVALYELLY 687

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +I+  +F
Sbjct: 688 NVMLLLAPFVPHITEEIYHAIF 709



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV 67
          I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG     K  +  G+
Sbjct: 38 IDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELKVEKEFGI 97

Query: 68 T 68
          T
Sbjct: 98 T 98


>gi|288870476|ref|ZP_06114221.2| leucine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288867047|gb|EFC99345.1| leucine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 285

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 11/215 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER K Y      YP+ A  H+GH       +V++R  R++G +VLF  G D  G      
Sbjct: 46  ERPKFYGLVEFPYPSGAGMHVGHIKAYSSLEVISRKRRMEGYNVLFPIGFDAFGLPTENY 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV  +   D N   F +    +  S+D    + TT++ ++   + ++ K+ +KG +
Sbjct: 106 AIKTGVHPRKITDDNIARFSNQLKKVGFSFDWSRVVDTTDEDYYKWTQWIFLKMFEKGLV 165

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           ++      Y    +   ++++    + G   +  H+ +    +  +F R++ Y DKLL  
Sbjct: 166 FRDTALVNYCPSCKVVLSNED----SQGGKCDICHSDIVQKSKSVWFLRITEYADKLLKG 221

Query: 180 YESHPEFILPIERRNEV--ISFVKSGLKDLSLSRK 212
            ++     LP  R+ +V  I   +    D SL+ K
Sbjct: 222 LDTVD--YLPNIRQQQVNWIGKSEGAFVDFSLADK 254


>gi|282881259|ref|ZP_06289945.1| leucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304849|gb|EFA96923.1| leucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 949

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D +G    +
Sbjct: 28  KQKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRQQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +  +QN +++R+  D +  S+  D  IRT + +++
Sbjct: 88  YAIQTGQHPAITTEQNIQHYREQLDKIGFSFDWDREIRTCDPKYY 132


>gi|237802725|ref|YP_002887919.1| valyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273959|emb|CAX10751.1| valyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 939

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 26/178 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHA    + D L R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTVV 95

Query: 56  ---QKIAKAAQNAGVTTKVFVD------QNSRN-----FRDMADVLDISYDDFIRTTEKR 101
               K +   Q    + + F+       + S+N      R +    D S   F  T +  
Sbjct: 96  ERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +   +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V 
Sbjct: 154 ANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVN 211


>gi|166154512|ref|YP_001654630.1| valyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|301335772|ref|ZP_07224016.1| valyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|259516800|sp|B0B7L8|SYV_CHLT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165930500|emb|CAP03994.1| valyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
          Length = 939

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLREFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDEDSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597


>gi|85707107|ref|ZP_01038195.1| isoleucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85668393|gb|EAQ23266.1| isoleucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 994

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 17/140 (12%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           ++ K G K   LS      GI  PDD +    I+ VW D+ + +       D  DGS+  
Sbjct: 575 AWYKDGAKARFLS------GIVNPDDWRKVDDILDVWFDSGSTHAFV--LRDRADGSEDG 626

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
              ADL++ G D  R  FH+    +       P  + V +HGF L  KG K+SKSLGN +
Sbjct: 627 L--ADLYLEGTDQHRGWFHSSMLQSCGTRGRAPY-RGVLTHGFTLDEKGNKMSKSLGNTV 683

Query: 312 DPIEVIEEVGVDALRYFLVR 331
            P EV+++ G D LR ++ +
Sbjct: 684 APEEVVKQYGADILRLWVAQ 703



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 66  YANGHLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPI 109


>gi|289551024|ref|YP_003471928.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180556|gb|ADC87801.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 916

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 31/231 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+N P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLENRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++        D   D
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-----SSTDYLAD 630

Query: 343 ---KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
               D + K+  +D+   I N    ++  +L + +   P   A  ESD  +L V   +L 
Sbjct: 631 VRISDEILKQT-SDVYRKIRN----TLRFMLGNVNDFNPDTDAVLESD--LLEVDRYLLN 683

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +RE   + + H      +++  EV  + +     EL     D    +LY+
Sbjct: 684 RLREFTASTIHHYDNFDYLNIYQEVQNFINV----ELSNFYLDYGKDILYI 730



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    F  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDF----IR-------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A + +++   DF    +R        T K  ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|189030335|sp|A9M162|SYL_NEIM0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|164658017|ref|XP_001730134.1| hypothetical protein MGL_2516 [Malassezia globosa CBS 7966]
 gi|159104029|gb|EDP42920.1| hypothetical protein MGL_2516 [Malassezia globosa CBS 7966]
          Length = 1080

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 126/343 (36%), Gaps = 75/343 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+          ++P  +   G DIL F    W A ++      
Sbjct: 597 VLDTWFSSGLWPFSTLGWPRANTDDMKYYYPTSMLETGWDILFF----WVARMIMLGVYH 652

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE--------------------- 318
           +  LP  K+VF H  +    G K+SKSLGNVIDPI+VIE                     
Sbjct: 653 TGQLPF-KEVFCHAMVRDAHGRKMSKSLGNVIDPIDVIEGISLEGLQQRLREGNLDEKEI 711

Query: 319 ----------------EVGVDALRYFLVREIACGKDGFYD---KDGLKKRVNADLANGIG 359
                           + G DALR+ L    A G+D   D    +G +K  N        
Sbjct: 712 NKAAQGQKKDYPRGIPQCGTDALRFTLCAYTAAGRDINLDIMRVEGYRKFCN-------- 763

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-------DESILSVCSRVLQEIRENMQNQLIHR 412
            L + +   +LK  DG  P P A  ++       ++ IL   +   +++  +MQ +    
Sbjct: 764 KLWNATRFALLKLQDGYTPLPLAEQDAFVPQSLVEKWILYRLNATAKQLDHDMQQRSFMS 823

Query: 413 ALAQVIS--LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A + V +  L    D Y +A KP       P    +  +     +     LL  F+P + 
Sbjct: 824 ATSCVYNFWLYDLCDVYIEAIKPITDAGAEPAARLSAQHTLYACLDAGLKLLHPFMPFVT 883

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLH------KTFDPIF 507
            +++  L V  +  C      R  P    H        FD +F
Sbjct: 884 EELWHRLPVRPQETCETIAHTRFPPWNPTHDFAAEAAQFDDVF 926


>gi|116334043|ref|YP_795570.1| isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269273|sp|Q03QI3|SYI_LACBA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116099390|gb|ABJ64539.1| Isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 937

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ T++   L    YLD         +PADL++ G D  R  F++    +   +
Sbjct: 526 IMDVWFDSGTSHQGVLAERDYLD---------FPADLYLEGSDQYRGWFNSSLITSVAAT 576

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  K+V S GF L K G K+SKSLGN I P E+I ++G D +R ++ 
Sbjct: 577 GKAPY-KQVVSQGFTLDKDGHKMSKSLGNTIAPDEIISKMGADIVRLWVT 625



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG-----VTT 69
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG     ++T
Sbjct: 58  YANGPIHMGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQLTKAGYDRKKMST 117

Query: 70  KVF-----------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             F           VDQ    F+ +   +   +D+   T +         ++ +++ +G 
Sbjct: 118 AEFRDLCREYALKQVDQQREGFKRLG--VSAEWDNPYLTLKPEFEAAEVRVFGEMAKRGL 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + EV
Sbjct: 176 IYKGKKPVYWSWSSESAMAEAEV 198


>gi|304388367|ref|ZP_07370478.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337633|gb|EFM03791.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|240079964|ref|ZP_04724507.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268596104|ref|ZP_06130271.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268549892|gb|EEZ44911.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 929

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            E+A  K+       + KRV           +  ++S +  +     P   A  +++   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVPQAEMVE 686

Query: 391 LSVCSRVL-QEIRENMQNQL-----IHRALAQVISLVSE----------VDRYFDAQKPW 434
           +   + VL ++++E +          H A+ +++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARQLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|167618683|ref|ZP_02387314.1| leucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 864

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  RKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G     +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGAPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VTTCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYMRITQYADELLN 204


>gi|116618581|ref|YP_818952.1| isoleucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097428|gb|ABJ62579.1| Isoleucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 930

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 32/209 (15%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L T   LD         +PAD+++ G D  R  F++    +  ++
Sbjct: 526 IMDVWFDSGSSWNGVLNTRPQLD---------YPADMYLEGSDQYRGWFNSSLITSVAVN 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K + S GF L  KG K+SKSLGN I PIEV  ++GV+ LR + +  +   +D  
Sbjct: 577 GVAPY-KAILSQGFTLDGKGNKMSKSLGNTISPIEVANKLGVEILRLWTI-SVDTSQDMP 634

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-----ILSV 393
              + LK+       L N +  L++ +      D+D   PT  A   SD S       ++
Sbjct: 635 VSNEILKQVSENYRKLRNTLRFLMANTA-----DFD---PTKDAIAYSDLSAHDQYFYAL 686

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +  + +IR++  N  ++    +VI+ V+
Sbjct: 687 ENEFVADIRKDYDNYQLNDIFKRVINFVN 715



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D++ R+  + G    +  G D HG  I +     G   K    
Sbjct: 58  YANGNIHIGHALNKITKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQLTKLGHDRKSMPK 117

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
              RN  +D A   +D    DF R            T +   ++ ++ ++  +  KG I+
Sbjct: 118 HEWRNLAKDFALKQVDTQRADFKRLGVLGDWDNPYITLQPEFESAQVRVFGTMVSKGYIF 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGAKPVYWSWSSESALAEAEI 198


>gi|16800837|ref|NP_471105.1| leucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|29336554|sp|Q92AZ9|SYL_LISIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16414256|emb|CAC97000.1| leucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 803

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 13/198 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y+   +  W         N++ +   ++   +     P+ QWM       +++AY D+L
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGFPVFRKPMRQWM------LKITAYADRL 201

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 202 LDDLELVDWPENIKDMQR 219



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 51/239 (21%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           G L  +                   T+++ ++      +++ +  + +N   +  ++Q++
Sbjct: 638 GTLAEKVT-----------------TDANANLEKAYHHMVKTVTNHYENLRFNTGISQLM 680

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++E  +          + T P           + +     LL    P LA ++++IL
Sbjct: 681 IFINEAYK----------RDTIPK----------QYVEGFVQLLSPIAPHLAEELWEIL 719


>gi|89099648|ref|ZP_01172522.1| leucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085591|gb|EAR64718.1| leucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 805

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 39/195 (20%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFIL-H 298
           D    K W P D+++ G +    H +Y   W  FL     +S   P  +K+F+ G IL  
Sbjct: 514 DADLLKEWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVSTKEPF-QKLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK---R 349
             EK+SKS GNV++P E++E  G D LR +      L   +A   +G    DG ++   R
Sbjct: 573 NNEKMSKSKGNVVNPDEIVESHGADTLRLYEMFMGPLEASVAWSTNGL---DGARRFLDR 629

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           V   L +  GNL SR     +KD            E + S+     + ++++ E+ +   
Sbjct: 630 VWRLLIDTDGNLHSR-----IKD-----------AEPESSLEKAYHQTVKKVTEDYEGLR 673

Query: 410 IHRALAQVISLVSEV 424
            + A++Q++  ++E 
Sbjct: 674 FNTAISQLMVFINEA 688



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +   Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KGKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRVKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   FR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTKKNIDTFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFTKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL
Sbjct: 148 AYIDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYGDRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE +  ++R
Sbjct: 203 EDLEELDWPESLKDMQR 219


>gi|315658520|ref|ZP_07911392.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496849|gb|EFU85172.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 916

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 25/228 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+N P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLENRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R + V       D    
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLW-VSSTDYLADVRIS 634

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + LK+   +D+   I N    ++  +L + +   P   A  ESD  +L V   +L  +R
Sbjct: 635 DEILKQ--TSDVYRKIRN----TLRFMLGNVNDFNPDTDAVLESD--LLEVDRYLLNRLR 686

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           E   + + H      +++  EV  + +     EL     D    +LY+
Sbjct: 687 EFTASTIHHYDNFDYLNIYQEVQNFINV----ELSNFYLDYGKDILYI 730



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    F  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDF----IR-------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A + +++   DF    +R        T K  ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|296435818|gb|ADH17992.1| valyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437678|gb|ADH19839.1| valyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140177|gb|ADH96935.1| valyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 939

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVIRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597



 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 26/178 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHA    + D L R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTVV 95

Query: 56  ---QKIAKAAQNAGVTTKVFVD------QNSRN-----FRDMADVLDISYDDFIRTTEKR 101
               K +   Q    + + F+       + S+N      R +    D S   F  T +  
Sbjct: 96  ERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +   +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V 
Sbjct: 154 ANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVN 211


>gi|288574922|ref|ZP_06393279.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570663|gb|EFC92220.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 924

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+  ++      L+N P+ S    WPADL++ G D  R  F      +      
Sbjct: 532 IMDVWFDSGISHFAV---LENRPELS----WPADLYLEGSDQHRGWFQTSLLTSVATRGV 584

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K V +HGFI+  KG+K+SKS+GNV+ P E+I+  G D LR ++
Sbjct: 585 APY-KAVLTHGFIVDGKGKKMSKSIGNVVAPQEIIDTNGADILRLWV 630


>gi|307721380|ref|YP_003892520.1| valyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979473|gb|ADN09508.1| valyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 875

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----NLPLP-KKVFSHGFILHK-GEKISKSLG 308
           F+P  L + G DIL F    W A ++      N  LP K ++ H  +  + G+K+SKS G
Sbjct: 485 FYPNSLLITGFDILFF----WVARMMMMGEHFNGELPFKHIYLHALVRDEHGQKMSKSKG 540

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP++++ +   D LR+ L    A G+D    +D L+  +N +  N + N  S+ + M
Sbjct: 541 NVIDPLDMVNKYSADVLRFTLAISAAQGRDIRMSQDKLE--LNRNFTNKLYN-ASKFLQM 597

Query: 369 ILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            ++ +  M    G   E+D    ++S  +   +E+R  +     + A   +   +   + 
Sbjct: 598 NVETFPDM---NGFCVETDLGRYMMSRLNFATKEVRAYLDEYKFNDAALTMYRFL--WNE 652

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + D    W ++ +  D+AS V      + ++   LL  F+P +   ++
Sbjct: 653 FCD----WGIELSKADKASIVELGA--IFKEAMKLLHPFMPFITEHLY 694



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 3  EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + E    S  +  PN   + HIGHA    + D++ R+ R+DG   L+  GTD  G
Sbjct: 34 QEEDKNFSIMMPPPNVTGRLHIGHALTFTLQDIITRYKRMDGYKTLWQPGTDHAG 88


>gi|189083226|sp|A4VQZ0|SYL_PSEU5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 868

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNQVAPAKWTYENIAYMKAQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 Y---YESHPEFILPIER 192
                +  PE +  ++R
Sbjct: 205 SLDELDGWPEQVKTMQR 221


>gi|118150802|ref|NP_001071314.1| leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
 gi|117306241|gb|AAI26599.1| Leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 616

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N R+ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIRHMRKQLDQLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200


>gi|37525270|ref|NP_928614.1| leucyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|48428523|sp|Q7N755|SYL_PHOLL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|36784697|emb|CAE13597.1| leucine-tRNA synthetase (leucine--tRNA ligase) (LEURS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 860

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIEYMKGQLKTLGFGYDWDREVTTCTPEYYHWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              S  +   D     +++V    DG  +    + V+  E   +F +++ Y ++LLS   
Sbjct: 152 KTSSVNWCPHDLTVLANEQV---VDGCCWRCD-SKVERKEIPQWFIKITDYAEELLSDLE 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEEWPEQVKTMQR 221


>gi|239832887|ref|ZP_04681216.1| leucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239825154|gb|EEQ96722.1| leucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 883

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN    R     + +S D   +F  T +  ++   ++L+  + +KG + 
Sbjct: 99  QNKVHPKEWTYQNIATMRGQLKSMGLSLDWAREFA-TCDVEYYHRQQMLFIDLFEKGLVT 157

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  + +    N+  V    DG+ + +    V+  E   +FF+++ + ++LL+
Sbjct: 158 RKTSKVNWDPVDNTVLANEQVV----DGRGWRSGAL-VEQRELTQWFFKITDFSEELLA 211



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 33/223 (14%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PAD+ +   D  R       A LLS   P+       G I    EK+SKS  NV+DP ++
Sbjct: 604 PADIRIEETDGKRM------ASLLSTGEPV-----EIGSI----EKMSKSKKNVVDPDDI 648

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I   G D  R+F++ +    +D  + + G      A+ A+     V R +S   +    +
Sbjct: 649 IASYGADTARWFMLSDSPPERDVIWTEAG------AEGAHRFVQRVWRLISEAAEQLKDV 702

Query: 377 IPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            P  G  TE +  ++S    + ++ + ++++    +R +A++  LV+ V           
Sbjct: 703 APKTG--TEGEALVVSKAAHKAVKAVGDDIEKLAFNRGVARLYELVNTVAG--------P 752

Query: 436 LKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
           L++     A  VL   V +   +L ++L   +P LA +    L
Sbjct: 753 LQQVASGNADDVLKGAVRDATEKLILMLAPMMPHLAEQCLAAL 795


>gi|167585706|ref|ZP_02378094.1| isoleucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 945

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A +L    P  K + +HGF +  +G K+SKSLGN IDP
Sbjct: 575 PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY-KGLLTHGFTVDGEGRKMSKSLGNGIDP 633

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV   +G + +R ++      G+    ++  + KRV       I N + R +   L D+
Sbjct: 634 HEVANRLGAEIIRLWIASTDYSGELAISEE--ILKRVTEGYRR-IRNTL-RFLLANLSDF 689

Query: 374 D---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------V 424
           D     +P  G + E D   ++  +++  E+  + +    H  +A++ +  SE      +
Sbjct: 690 DYAQHALPV-GEWLEIDRYAVAFSAQLQAELLAHYEKYEFHPVVAKLQTYCSEDLGGFYL 748

Query: 425 DRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
           D   D         T    A T LY +T  ++R LA  L +F  + A K+F
Sbjct: 749 DVLKDRLYTSAADSTARRSAQTALYHLTQGLLRVLAPFL-SFTAEEAWKVF 798



 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|76789024|ref|YP_328110.1| valyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123744918|sp|Q3KM60|SYV_CHLTA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76167554|gb|AAX50562.1| valyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 939

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 26/178 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHA    + D L R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTVV 95

Query: 56  ---QKIAKAAQNAGVTTKVFVD------QNSRN-----FRDMADVLDISYDDFIRTTEKR 101
               K +   Q    + + F+       + S+N      R +    D S   F  T +  
Sbjct: 96  ERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +   +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V 
Sbjct: 154 ANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVN 211


>gi|116198217|ref|XP_001224920.1| hypothetical protein CHGG_07264 [Chaetomium globosum CBS 148.51]
 gi|88178543|gb|EAQ86011.1| hypothetical protein CHGG_07264 [Chaetomium globosum CBS 148.51]
          Length = 987

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 5/172 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IADV+ARFH L G +VL   G D  G     AA   G+
Sbjct: 94  YVLPMFPYPSGYLHLGHLRVYTIADVVARFHSLQGHNVLLPMGWDAFGLPAENAAIERGI 153

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++  +N    ++   +++ S+D    + T +   +   + ++  + ++G  Y+    
Sbjct: 154 NPAIWTKENIAKMKEQLGLMNGSWDWSCELSTCDPSFYKHTQKIFLLLREQGLAYQAEAE 213

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y   D+    +++V          A+   V+  + + +F R+S +++ LL
Sbjct: 214 VNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRKLKQWFLRISEFRESLL 262


>gi|104783754|ref|YP_610252.1| leucyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079078|sp|Q1I4G7|SYL_PSEE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|95112741|emb|CAK17469.1| leucyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 868

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNNVAPAKWTYENIDYMKTQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 152 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|269986994|gb|EEZ93270.1| aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 782

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 17/149 (11%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K G K+ +   +TFD               W+D+  + L  T YL + +  + K +P  L
Sbjct: 449 KCGGKEFTGDERTFD--------------TWMDSSVSALYVTKYLYDKNFYE-KTYPLSL 493

Query: 261 HVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DI+R    Y     + L+  LP  K       +   GEK++KS GN IDP  VIE
Sbjct: 494 RTQGIDIIRTWLNYSILRCYQLTGKLPWEKAWIDGMGLDEHGEKMAKSKGNGIDPTIVIE 553

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + G DA R++   E   G +  + +  L+
Sbjct: 554 KYGADAFRFWATSEALPGSNFLFSESRLQ 582



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 17/161 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E         Y + +P H+G A +    D +AR  R+ G +VLF  G D +G  + + 
Sbjct: 38  EKEIFSTDAPPPYTSGRPWHLGAAAQYSKIDTIARSQRMLGKEVLFPVGMDRNGIPVERY 97

Query: 62  AQNA-GV------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
           A+   G+              K  +D+  +   D+ +    S  +D+  RT  K +    
Sbjct: 98  AEKKYGIRMRDTPREKFLEICKTSLDELEKEMFDILNSFAYSADFDNVYRTDSKEYRTLT 157

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGAD 146
           +  + ++  KG I +G     Y +       D E+ YK  D
Sbjct: 158 QSTFIEMWKKGQIIRGTRPSNYCIDCGTTIADAEIEYKTID 198


>gi|240013385|ref|ZP_04720298.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120456|ref|ZP_04733418.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 929

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 53/289 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
            E+A  K+       + KRV           +  ++S +  +     P   A  +++   
Sbjct: 639 GELAISKE-------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVPQAEMVE 686

Query: 388 -ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPW 434
            +    V +R LQE    +       H A+ +++S  SE           DR +  +   
Sbjct: 687 IDRYALVLARQLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADS 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++    A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 747 RARRS----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|15791298|ref|NP_281122.1| valyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169237056|ref|YP_001690256.1| valyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74568687|sp|Q9HMG9|SYV_HALSA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|254783553|sp|B0R841|SYV_HALS3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10581937|gb|AAG20602.1| valyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167728122|emb|CAP14910.1| valine--tRNA ligase [Halobacterium salinarum R1]
          Length = 881

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 17/258 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           +M  W+D+    L  +G+   P+G+   +F   DL   G DI+R  A Y    L +  L 
Sbjct: 453 VMDTWMDSSITPLHLSGW---PEGTTLDEFESVDLRPQGHDIIRTWAFY--TLLRTGALT 507

Query: 286 LPK---KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +    V  +G +    G K+SKS GN + P E I E   DA+R  L      G D  +
Sbjct: 508 DEQPWDDVLVNGMVFGEDGNKMSKSRGNFVQPDEAIAEYSADAVRQALALGGRPGSDVQF 567

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +K          + N+   S     +D    I  P A+ ++D  +LS  S V +++
Sbjct: 568 QWKEVKSASR--FLTKLWNITKFSTGHFDEDTPA-IQDP-AYRDADRWLLSELSTVCEDV 623

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E M      RAL  +     E   D Y +  K   L    P   +   +     +  + 
Sbjct: 624 DEAMSEYRFDRALRSLREFAWEDLADDYVELVKG-RLYNGRPGERAAAEHTLYTAVTAVT 682

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL  F P    +I+  L
Sbjct: 683 RLLAPFSPHTTEEIWQSL 700



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 25/47 (53%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          I T   YP+   H+GHA      D +AR+ RL G  VLF  G D HG
Sbjct: 40 IDTPPPYPSGNLHLGHALGWSYIDFVARYRRLKGDAVLFPQGWDCHG 86


>gi|15605023|ref|NP_219807.1| valyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|237804647|ref|YP_002888801.1| valyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255317404|ref|ZP_05358650.1| valyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6226197|sp|O84304|SYV_CHLTR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3328717|gb|AAC67895.1| Valyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|231272947|emb|CAX09858.1| valyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436743|gb|ADH18913.1| valyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748431|gb|ADI50977.1| Valyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749311|gb|ADI51989.1| Valyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 939

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDENSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597



 Score = 43.5 bits (101), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 26/178 (14%)

Query: 5   EKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN     H+GHA    + D L R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTVV 95

Query: 56  ---QKIAKAAQNAGVTTKVFVD------QNSRN-----FRDMADVLDISYDDFIRTTEKR 101
               K +   Q    + + F+       + S+N      R +    D S   F  T +  
Sbjct: 96  ERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +   +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V 
Sbjct: 154 ANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVN 211


>gi|14590232|ref|NP_142298.1| valyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|3256704|dbj|BAA29387.1| 896aa long hypothetical valyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 896

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  +AK W     P  L   G DI+R  A Y     +
Sbjct: 458 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTY 517

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 518 VLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTAL-APPGED 576

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D+ ILS   R++
Sbjct: 577 HPFKWETVD--YNYRFLQKVWN-IYRFAERHIKDFDYEKYRDVELEPLDKWILSRLHRII 633

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++I+ +     D Y +  K + L   + +          E++ 
Sbjct: 634 KFATEELERYRFNLITRELITFIWHEVADDYIEMIK-YRLYGEDEESKLKAKVALYELLY 692

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +I+  +F
Sbjct: 693 NVMLLLAPFVPHITEEIYHAIF 714



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV 67
           I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG     K  +  G+
Sbjct: 43  IDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELKVEKEFGI 102

Query: 68  T 68
           T
Sbjct: 103 T 103


>gi|240047649|ref|YP_002961037.1| isoleucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985221|emb|CAT05234.1| Isoleucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 885

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 12/106 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++L       + DG K+   P DL++ G D  R  F++    +++     
Sbjct: 518 ILDVWYDSGSSFLAA-----DIDGEKS---PFDLYLEGSDQYRGWFNSSLINSYIYQQKS 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  KK+ SHGF++  KG K+SKS GN I P+E+I++ G D LR ++
Sbjct: 570 PY-KKLLSHGFVVDAKGNKMSKSKGNGISPLELIDKYGTDVLRLWV 614



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 13/152 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K ++   +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG     K
Sbjct: 48  KNKQSFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMQGFYAPFVPGWDTHGLPIENK 107

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADV-----LDISYDDF--IRTTEKRHHDTCRI-L 109
           I    ++  V     +  N  N +  + +     LD+ + DF  I  T K  ++  ++ L
Sbjct: 108 IISQIKDQDVVQIRTLANNYANSQVQSQMSQFKKLDL-FTDFSKIYQTNKPSYEAKQLQL 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +K++  +  IY+G    ++S   ++   + E+
Sbjct: 167 FKEMVSQNLIYRGLKPVYWSTSSQSALAEAEI 198


>gi|226321569|ref|ZP_03797095.1| leucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226232758|gb|EEH31511.1| leucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 840

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|158335764|ref|YP_001516936.1| valyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306005|gb|ABW27622.1| valyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 1123

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 35/282 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +     +T G+ +      + ++P    V G DI+ F    W A
Sbjct: 458 VQLLQDPD-VLDTWFSSGLWPFSTLGWPEE-TADLSTYYPTATLVTGFDIIFF----WVA 511

Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       +  +P  K V+ HG +     +K+SKS  N IDP+ +I++ G DALRY L+
Sbjct: 512 RMTLMAGHFTGEMPF-KDVYIHGLVRDENNKKMSKSSNNGIDPLILIDKYGTDALRYTLI 570

Query: 331 REIA-CGKD-----GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPG 381
           RE+A  G+D          +      + + AN + N  SR V M LK         P   
Sbjct: 571 REVAGAGQDIRLEYNRTTDESTSVEASRNFANKLWN-ASRFVLMNLKGQTPEQLGQPAIA 629

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWE 435
               +D  ILS   R++Q+ R    NQ+    L +    + E       D Y +  KP  
Sbjct: 630 DLELADRWILSRYHRLVQQTR----NQVDAYGLGEAAKGLYEFIWGDFCDWYIELVKP-R 684

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L++               V+     L   F+P +  +I+  L
Sbjct: 685 LRQEGTTSQRVAQQTLAYVLEGTLKLFHPFMPHITEEIWQTL 726



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + DVL R+HR+ G + L+  GTD
Sbjct: 56 HMGHAFEAALIDVLIRYHRMIGDNTLWLPGTD 87


>gi|294101689|ref|YP_003553547.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616669|gb|ADE56823.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 828

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 50/253 (19%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
           A +W P D ++ G +    H IY   F        L +A  P    + + G ++  G K+
Sbjct: 525 ANYWMPVDQYIGGIEHACMHLIYSRFFTKVFADLGLCNAREPF-SNLLTQGMVIKDGAKM 583

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP E+I++ G D  R F++     G D  + + G++         G+   ++
Sbjct: 584 SKSLGNVVDPDEIIQKFGADTARLFILFAAPPGNDLEWSEQGVE---------GVHRFLN 634

Query: 364 RSVSMILKDYDGMIPTP------GAFTESD-----ESILSVCSRVLQEIRENMQNQLIHR 412
           R    I ++ +G+          G+    D       I      V ++I+E  Q    + 
Sbjct: 635 RVWRYIEENLEGLKNASMERVEMGSLVNKDRRDFKRKIHKTIEDVTRDIQEERQ---FNT 691

Query: 413 ALAQVISLVSEVDRYFDA-QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+A+++ L++ +       +K W L +              E +  L + L  F P +  
Sbjct: 692 AVARLMELLNSIYSCSPKDEKDWGLLR--------------EGVEVLLMCLNPFCPHITE 737

Query: 472 KIFDILFVADENR 484
           +++ +L   ++NR
Sbjct: 738 ELWQML--GNQNR 748



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 7/184 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y      YP+   H+GH     I D++ARF  ++G +VL   G D  G     AA 
Sbjct: 30  KKKFYCLEMFPYPSGALHMGHLRNYSIGDMMARFLWMNGYNVLHPMGFDAFGLPAENAAL 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             GV    +  +N     D    +  SY  D  + T    ++   + ++ +   KG  Y 
Sbjct: 90  KYGVQAHEWTHKNIEQMTDQLKRMGCSYDWDRRVETCNPDYYRWTQWIFLQFFKKGLAYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W    +    N+      ++G+ +   ++PV   + E +FFR++ Y  +LL   
Sbjct: 150 KKAPVNWCESCNTVLANEQ---VDSEGKCWRC-NSPVIKKKLEQWFFRITDYAQELLDDL 205

Query: 181 ESHP 184
           +  P
Sbjct: 206 DQLP 209


>gi|195337561|ref|XP_002035397.1| GM14681 [Drosophila sechellia]
 gi|194128490|gb|EDW50533.1| GM14681 [Drosophila sechellia]
          Length = 869

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 25/190 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA 
Sbjct: 61  KDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y+
Sbjct: 121 QRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELTTCSPKYYKWTQHLFLMLHRHGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W             +F R SA
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLRQWFIRTSA 227

Query: 172 YQDKLLSYYE 181
           Y  +LL   E
Sbjct: 228 YAKQLLDGLE 237


>gi|116492415|ref|YP_804150.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266121|sp|Q03GG4|SYL_PEDPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116102565|gb|ABJ67708.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 805

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 19/176 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLG 308
           P DL+V G +    H +Y   W   L    +   K+ F    + G IL    EK+SKS G
Sbjct: 524 PVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKG 583

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P +++E  G D LR + +      +   + +DGL         NG    + R   +
Sbjct: 584 NVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSEDGL---------NGSRKWIDRVWRL 634

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ D + +       TE+D S+  + ++ ++++ ++ +N   + A++Q++  V+E 
Sbjct: 635 MIDDENQL--RDHIVTENDGSLDMIYNQTVKKVTDDYENMRFNTAISQMMVFVNEA 688



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 9/180 (5%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+++R  R+ G  VL   G D  G    + 
Sbjct: 29  DKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N +NF+     L  SYD    + TT+  ++   + +++++  KG  
Sbjct: 89  AMKTGNNPRDFTAKNIQNFKRQIQSLGFSYDWSREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 Y-KGCYSGWY-SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W   L       ++EV    DG+       PV     + +  +++AY D+L+
Sbjct: 149 YEKETLVNWAPDLMGGTVVANEEV---VDGKTERGGF-PVYRKPMKQWILKITAYADRLI 204


>gi|325129489|gb|EGC52318.1| leucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 876

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|319942764|ref|ZP_08017068.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319803644|gb|EFW00594.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 879

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ + + YP+ + H+GH     + DV+ RFHR+ G +V+   G D  G     AA 
Sbjct: 38  KPKFYVCSMLPYPSGKLHMGHVRNYTLNDVMYRFHRMKGYNVMTPMGWDAFGLPAENAAL 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  + +   + L +++D    + T +  ++   + L+ K+ +KG  Y+
Sbjct: 98  AKKVQPAAWTYSNIADMKAQMEPLGLAFDWSREVATCKPEYYRWNQWLFLKMLEKGIAYR 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D+    +++V +G   +        V+  E  GY+  ++ Y  +LL
Sbjct: 158 KTQIVNWDPVDKTVLANEQVIEGRGWR----SGAIVEKREIPGYYLGITQYAQELL 209


>gi|309360628|emb|CAP30950.2| CBR-LARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 1083

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 40/77 (51%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI +   YP+ + HIGH     I+D  AR++RL+G  V+   G D  G     AA+N
Sbjct: 63  EKKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYRVIHPIGWDSFGLPAENAARN 122

Query: 65  AGVTTKVFVDQNSRNFR 81
            GV  + +  QN    R
Sbjct: 123 NGVDPREWTIQNIETMR 139


>gi|222087922|ref|YP_002546460.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221725370|gb|ACM28526.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 876

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA+
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAR 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  V  K +  QN  + +     + +S D   +F  T +  ++   ++L+  +  KG IY
Sbjct: 93  DNKVHPKEWTYQNIASMKAQLKAMGLSLDWSREFA-TCDVEYYHRQQMLFIDMMQKGLIY 151

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  + +    N+  +    DG+ + +    V+  E   +FF+++ +  +LL
Sbjct: 152 RKKSKVNWDPVDNTVLANEQVI----DGRGWRSGAL-VEQRELTQWFFKITDFSQELL 204



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       A+    
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPDRDVIWSEAGVEG------AHRFTQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R VS    +   +   P    E+  +I  +  R L+ ++ +      ++A+A++   
Sbjct: 685 RMWRLVSEAADELKAVTSVPAKEGEA-LAISQIAHRTLKAVQADYDKLAFNKAVARIYEF 743

Query: 421 VS 422
           V+
Sbjct: 744 VN 745


>gi|76788931|ref|YP_328017.1| leucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237802632|ref|YP_002887826.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|123744920|sp|Q3KMF3|SYL_CHLTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76167461|gb|AAX50469.1| leucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273866|emb|CAX10657.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 819

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y        +++E+  G   DG Y   +    QW+       R++A+ D+LL
Sbjct: 150 MADMAVNYCPELGTVLSNEEIENGFSVDGGYPVERRMLRQWV------LRITAFADQLL 202


>gi|32266689|ref|NP_860721.1| isoleucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81665720|sp|Q7VGX8|SYI_HELHP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|32262740|gb|AAP77787.1| isoleucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 930

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 25/213 (11%)

Query: 225 QYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           ++I+ VW D+ + +  +    Y    +   A   PAD+++ G D  R    +  + LLS 
Sbjct: 533 KHILDVWFDSGSTWSAVLENEYKGAGNNYDAGSHPADMYLEGSDQHR--GWFQSSLLLSC 590

Query: 283 NLP--LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +    P K++ +HGF   + GEK+SKS GNVI P E+I+  G + LR ++         
Sbjct: 591 AIAKRAPYKQILTHGFTFDRNGEKMSKSKGNVISPSEIIKTQGSEILRLWVALSHYQSDQ 650

Query: 339 GFYDKDGLK------KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              D + LK      +++   +   + N    S  M+ KD   +I         D  ILS
Sbjct: 651 NISD-EILKQVGEQYRKIRNTIRFLLANASQNSQDMVEKDELDVI---------DRWILS 700

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVIS-LVSEV 424
           VC RV  E  E        +A   V+S L++E+
Sbjct: 701 VCDRVFDEAYEYFDEYEFAKAFQVVMSFLINEL 733



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 8/65 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ ++H   G ++ +T G D HG        QKI KA ++  
Sbjct: 58  YANGHLHIGHALNKILKDIIVKYHYFKGENIRYTPGWDCHGLPIEQQVEQKIGKAKKDNL 117

Query: 67  VTTKV 71
             TK+
Sbjct: 118 NKTKL 122


>gi|218767582|ref|YP_002342094.1| isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543093|sp|Q9JVY4|SYI_NEIMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121051590|emb|CAM07888.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 929

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+ +++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+    E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGAED 788



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|13508259|ref|NP_110208.1| isoleucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501010|sp|P75258|SYI_MYCPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1673995|gb|AAB95970.1| isoleucine-tRNA ligase [Mycoplasma pneumoniae M129]
          Length = 861

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 33/256 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           + VW D+ + Y        N   S    +PADL++ G D  R  F++      + +  LP
Sbjct: 522 LEVWFDSGSTY--------NVLISNKLNFPADLYLEGSDQYRGWFNSSASCGIIQTDQLP 573

Query: 286 LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + SHGF L + G K+SKSLGNV+DP+++ ++ G D LR + V  +    D     +
Sbjct: 574 F-KSLISHGFTLDEHGNKMSKSLGNVVDPLKLCDQYGADILRLW-VTNVDWQVDNRIGDN 631

Query: 345 GLKKRV-------NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +K+ V       N+ L   +GNL   +    +KDY         F   D+ ++   + +
Sbjct: 632 IIKQIVEQYRRIRNSLLRFILGNLNHFNFGE-MKDY--------RFALEDKIVIHKTNAL 682

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDR-YFDAQKP--WELKKTNPDRASTVLYVTVEV 454
           +QE+ + ++       L  +   V  +   YF+  K   +   KTNP+R +    +   +
Sbjct: 683 VQELHQWLKQYNFLNCLKAINKFVLWLSGWYFEIIKDTLYCDAKTNPNRVAKQAVLNY-I 741

Query: 455 IRQLAILLQAFVPKLA 470
             QL   L  F+P  A
Sbjct: 742 FTQLIGFLNIFIPHTA 757



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 22/48 (45%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           Y N   H+GHA   I+ D + R   L G   +F  G D HG  I  A 
Sbjct: 58  YANGNIHVGHALNKILKDFVLRSWNLQGFGTVFIPGWDCHGLPIEHAV 105


>gi|228476477|ref|ZP_04061167.1| leucyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251898|gb|EEK10944.1| leucyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 833

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|153008429|ref|YP_001369644.1| leucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166231624|sp|A6WXW1|SYL_OCHA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151560317|gb|ABS13815.1| leucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 877

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 20/184 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN    R     + +S D   +F  T +  ++   ++L+  + +KG + 
Sbjct: 93  QNKVHPKEWTYQNIATMRSQLKSMGLSLDWAREFA-TCDVEYYHRQQMLFIDLFEKGLVT 151

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAYQD 174
            K     W  + +    N+  V    DG+ + +     Q    QW      FF+++ + +
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVV----DGRGWRSGALVEQRELTQW------FFKITDFSE 201

Query: 175 KLLS 178
           +LL+
Sbjct: 202 ELLA 205



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 18/179 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G      A+ A+    
Sbjct: 627 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEAG------AEGAHRFVQ 680

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVIS 419
            V R V+   +    + P  G  T+ +  ++S    + ++ + ++++    +R +A++  
Sbjct: 681 RVWRLVAEAAEHLKDVAPKTG--TQGEALVVSKAAHKAVKAVGDDIEKLAFNRGVARLYE 738

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
           LV+             L++     A   L   V +V  +L ++L   +P LA +   +L
Sbjct: 739 LVNTAAA--------SLQQVASGNADDELKSAVRDVTEKLILMLAPMMPHLAEQCLAVL 789


>gi|126651278|ref|ZP_01723485.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591807|gb|EAZ85890.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 720

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K +      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFFALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPAEFTAKNIATFKRQIQELGFSYDWDREINTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+L+ 
Sbjct: 149 YVDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLID 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEEVDWPESIKDMQR 219



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 19/193 (9%)

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFS 292
           T T  + +P+  K ++ P D+++ G +    H +Y   W   L    +   K    K+F+
Sbjct: 507 TNTEAIADPELLK-RWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFN 565

Query: 293 HGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G IL +G EK+SKS GNV++P E+IE  G D LR + +          +  +GL     
Sbjct: 566 QGMILGEGNEKMSKSKGNVVNPDEIIESHGADTLRLYEMFMGPLEASVAWSTNGL----- 620

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
               +G    + R   +++ + DG I +      +D ++     + ++++ E+ +    +
Sbjct: 621 ----DGARRFLDRIWRLLVNEEDGTI-SAKIQVSNDATLEKSYHQTVKKVTEDYEGIRFN 675

Query: 412 RALAQVISLVSEV 424
            A++Q++  +++ 
Sbjct: 676 TAISQMMVFINDC 688


>gi|110679355|ref|YP_682362.1| isoleucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|109455471|gb|ABG31676.1| isoleucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 997

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 15/160 (9%)

Query: 182 SHPEFILPIERRNEVI--SFVKSGLKDL--SLSRKTFDWGIKIPDDPQYIMY---VWIDA 234
           + P+F+L  E  N+ I  +F   G        +++ F  GI  PDD   +M    VW D+
Sbjct: 552 TDPDFLLRNEDVNQRIVDAFEAEGADVWYEEGAKERFLGGIVDPDDYDQVMDILDVWFDS 611

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFS 292
            + +  T    D  DGS+     AD+++ G D  R  FH+    +   +   P  + V +
Sbjct: 612 GSTHAFT--LRDRADGSEDGI--ADVYMEGTDQHRGWFHSSLLQSVGTTGRSPY-RNVVT 666

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           HGF L  KG K+SKSLGN I P +++++ G D LR ++ +
Sbjct: 667 HGFTLDEKGMKMSKSLGNTIVPEKIVQQYGADILRLWVAQ 706



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 78  YANGHLHIGHALNKTIKDMIVRSHQMMGHDARYIPGWDCHGLPI 121


>gi|119357784|ref|YP_912428.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355133|gb|ABL66004.1| Isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 1086

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 26/261 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ +       Y   P  +K +F   +PAD    G D  R  F+ ++  A LL  + 
Sbjct: 551 VWFDSGSMPFAQLHY---PFENKEEFDRTFPADFIAEGVDQTRGWFYTLHAVATLL-FDC 606

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K +  +G IL K G K+SKS GNV+DP E ++  G DALR++L+      +   ++ 
Sbjct: 607 PAYKNLIVNGHILDKNGHKMSKSKGNVVDPFETMQRYGADALRWYLIATSPPWRPKSFNT 666

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVL 398
           D +++         I    S +  ++  + D    T         +E D  ILS  + + 
Sbjct: 667 DEIEEEQRKFFRAYIN---SYNFFVLYANVDAFTHTEPDIPLQDRSELDRWILSSLNTLS 723

Query: 399 QEIRENMQNQLIHRALAQVISL-VSEVDRYF--DAQKPWELKKTNPDR--ASTVLYVTVE 453
             +RE M+   +  A+  +    V ++  ++   ++K +   +  PD+  A   LY    
Sbjct: 724 SGVRERMEQYDLTGAVRLLNDFAVDDLSNWYIRRSRKRFWKSEMGPDKLAAYQTLYT--- 780

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +   A LL  F P LA +IF
Sbjct: 781 CLVTTAKLLAPFTPFLAERIF 801


>gi|323697808|ref|ZP_08109720.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457740|gb|EGB13605.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 938

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T+Y          +  K   +PADL++ G D  R  FH+    A + + ++
Sbjct: 535 ILDVWFDSGTSYAAVV------EQRKETRFPADLYLEGSDQHRGWFHSSLL-ASVGTRDV 587

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HG+++  +G K+SKS+GNV+ P E+I++ G + LR ++
Sbjct: 588 PPYKAVLTHGYVVDAEGRKMSKSIGNVLAPQEIIDKFGAEILRMWV 633


>gi|15888029|ref|NP_353710.1| isoleucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81496260|sp|Q8UHJ6|SYI_AGRT5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15155647|gb|AAK86495.1| isoleucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 967

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 570 ILDVWFDSGCTHTFT--LEDRPDMK----WPADVYLEGSDQHRGWFHSSLLESCATRGRA 623

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  +G K SKSLGNV+ P +V++E G D LR +++
Sbjct: 624 PY-NAVVTHGFTMDEQGRKQSKSLGNVVAPQDVMKESGADILRLWVM 669



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG     KI 
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDANYVPGWDCHGLPIEWKIE 113

Query: 60  KAAQNAGVTT-KVFVDQNSRNFRDM-ADVLDISYDDFIRT----------TEKRHHDTCR 107
           +A +  G    +V V++  +  RD  A  + +  ++F R           T    H   R
Sbjct: 114 EAYRARGKNKDEVPVNEFRKECRDFAAGWIKVQSEEFKRLGIEGDFENPYTTMNFHAEAR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELLKIARSGQLYRGSKPIMWSVVERTALAEAEV 209


>gi|239996928|ref|ZP_04717452.1| leucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 522

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 32  EKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N    ++    L   Y  D  + T +  ++   +  + ++ +KG +Y
Sbjct: 92  INNNTAPAKWTYSNIDYMKNQLRSLGFGYDWDREVTTCKSDYYRWEQWFFTRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KKNSTVNWDPVDQTVLANEQVI---DGRGWRSGA-LVEQKEIPQWFIKITDYAEELLQDL 207

Query: 181 ESHPEF 186
           E   E+
Sbjct: 208 EQLEEW 213


>gi|166155387|ref|YP_001653642.1| valyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|259516944|sp|B0BBT3|SYV_CHLTB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165931375|emb|CAP06948.1| valyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 939

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 72/241 (29%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLREFVNSEEIRIFPPEFVRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 --------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                DP+       ++  W  +    LT  G+ D       KF
Sbjct: 421 NKHDENVICFDGEGGPEEVMRDPESWYQDPDVLDTWFSSGLWPLTCFGWPDEDSLDLKKF 480

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG------------- 300
           +P  + V G DIL F  +     + SA +       VF HG I  K              
Sbjct: 481 YPTAVLVTGHDIL-FFWVTRMVLMCSAMVDTEPFSDVFLHGLIFGKSYREYDEKGEWFYV 539

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS GNVIDPIE+IE  G DA+R  L    +C   
Sbjct: 540 SGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIEAYGADAVRLTLC---SCANR 596

Query: 339 G 339
           G
Sbjct: 597 G 597


>gi|156934838|ref|YP_001438754.1| leucyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166231605|sp|A7MQS0|SYL_ENTS8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156533092|gb|ABU77918.1| hypothetical protein ESA_02686 [Cronobacter sakazakii ATCC BAA-894]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNINYMKNQLKMLGFGYDWSRELATCTPEYYRWEQQFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|62179248|ref|YP_215665.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62126881|gb|AAX64584.1| leucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713713|gb|EFZ05284.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 891

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 234


>gi|45658246|ref|YP_002332.1| isoleucyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|81407061|sp|Q72PR7|SYI_LEPIC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|45601488|gb|AAS70969.1| isoleucyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 914

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 14/108 (12%)

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I+ VW D+  +     G   D P        PADL+  G D  R  F +  WP+  L   
Sbjct: 528 ILDVWFDSGVSSFAVLGERKDEP--------PADLYFEGSDQHRGWFQSSLWPSMALRG- 578

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI-EVIEEVGVDALRYFL 329
           +P  K V +HG++L  KG  +SKSLGN IDP  +VI+  G D LR ++
Sbjct: 579 IPPYKTVLTHGYVLDEKGHPMSKSLGNGIDPTADVIQIYGADILRLWV 626


>gi|255348566|ref|ZP_05380573.1| leucyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503106|ref|ZP_05381496.1| leucyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 819

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y        +++E+  G   DG Y   +    QW+       R++A+ D+LL
Sbjct: 150 MADMAVNYCPELGTVLSNEEIENGFSVDGGYPVERRMLRQWV------LRITAFADQLL 202


>gi|255311009|ref|ZP_05353579.1| leucyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317310|ref|ZP_05358556.1| leucyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255506784|ref|ZP_05382423.1| leucyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525247|emb|CBJ14723.1| leucyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434795|gb|ADH16973.1| leucyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296435724|gb|ADH17898.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436648|gb|ADH18818.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437584|gb|ADH19745.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|296438515|gb|ADH20668.1| leucyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|297140083|gb|ADH96841.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 819

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y        +++E+  G   DG Y   +    QW+       R++A+ D+LL
Sbjct: 150 MADMAVNYCPELGTVLSNEEIENGFSVDGGYPVERRMLRQWV------LRITAFADQLL 202


>gi|238810099|dbj|BAH69889.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 893

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ + ++       N D  K    P DL++ G D  R  F++    +   +   
Sbjct: 527 IMDVWFDSGSTFMAV-----NID--KGLETPYDLYLEGSDQFRGWFNSSLINSVAYNGKA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + SHGF+L  KGEK+SKS GNV+DP+++I + G D LR ++
Sbjct: 580 PY-KNIVSHGFVLDAKGEKMSKSKGNVVDPLKIISKNGADILRLWV 624



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAA-------- 62
           Y N   HIGHA   I+ D++ R+  L G    +  G D HG     K+ + A        
Sbjct: 65  YANGNLHIGHALNKILKDIVIRYKSLRGFYAPYVPGWDTHGLPIEHKMLEEAHLKKNELS 124

Query: 63  -----QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                + A +  +  V++ +  F+ M  + D  +  +  T + +       L+KK+   G
Sbjct: 125 VVDLRKKAALYAQDQVNKQAEQFKSMQLLCD--FKKYYITKDPKFEAQQLRLFKKMIFSG 182

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   ++   + EV
Sbjct: 183 LIYKGLKPVYWSPSSQSALAEAEV 206


>gi|212704133|ref|ZP_03312261.1| hypothetical protein DESPIG_02188 [Desulfovibrio piger ATCC 29098]
 gi|212672493|gb|EEB32976.1| hypothetical protein DESPIG_02188 [Desulfovibrio piger ATCC 29098]
          Length = 895

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K  A ++P  + V G DI+ F    W A ++    
Sbjct: 457 VLDTWFSSALWPFSTMGW---PEQTKDLATWYPTSVLVTGFDIIFF----WVARMMMMGQ 509

Query: 285 PLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +V  H   LH       G K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D
Sbjct: 510 HFMGQVPFHDVYLHALVRDETGRKMSKSTGNVIDPLEMIDKYGCDSLRFTLTAFAAMGRD 569


>gi|189467740|ref|ZP_03016525.1| hypothetical protein BACINT_04132 [Bacteroides intestinalis DSM
           17393]
 gi|189436004|gb|EDV04989.1| hypothetical protein BACINT_04132 [Bacteroides intestinalis DSM
           17393]
          Length = 876

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 28/254 (11%)

Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   + + ++P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEISYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D D L ++   +  N
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKFGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFCN 586

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         + D     P P A   +     S  + V  E+ +      +  AL  
Sbjct: 587 KIWNAYRLVSGWTIDDSQ---PVPEAARLASCWFESKQNEVAAEVADLFSKYRLSEALMA 643

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P       S++    +     L  LL  F+P +  +
Sbjct: 644 VYKL------FWDEFSSWYLEMIKPAYGQGIHSSIHSAAISYFDNLLHLLHPFMPFITEE 697

Query: 473 IFDILFVADENRCF 486
           ++  ++  +E    
Sbjct: 698 LWQQMYEREEGESL 711


>gi|152992964|ref|YP_001358685.1| valyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151424825|dbj|BAF72328.1| valyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 878

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 12/105 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKS 306
           +F+P  L + G DIL F    W A +L      +  LP  K ++ H  +   KGEK+SKS
Sbjct: 488 EFYPNQLLITGFDILFF----WVARMLMMGENITGELPF-KDIYLHALVKDEKGEKMSKS 542

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            GNVIDP+ +IE+   DALR+ L      G+D    ++ L++  N
Sbjct: 543 KGNVIDPLVMIEKYSTDALRFTLAVLAVQGRDIKLSEEKLEQSRN 587



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 22/124 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAKAAQNAGVTTKV 71
           HIGH     + D++ R+ R+DG   L+  GTD  G         Q +A+      +  + 
Sbjct: 58  HIGHGLTFTLQDIIVRYKRMDGFKTLWQPGTDHAGIATQNVVEKQLLAEGTTKEEIGREA 117

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+ +            ++  R +      S + F  T ++   +  +  +K++ D GDI 
Sbjct: 118 FLKRAWQQKDSSGNAITKQLRKLGVSPAWSRERF--TMDEGLANAVKKSFKQMYDNGDIV 175

Query: 121 KGCY 124
           +G Y
Sbjct: 176 RGNY 179


>gi|156740103|ref|YP_001430232.1| leucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083141|sp|A7NFJ2|SYL_ROSCS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156231431|gb|ABU56214.1| leucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 904

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 5/175 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI     YP+   HIGH    +I D L R++ + G DVL   G D  G     AA   
Sbjct: 41  RRYILEMFPYPSGDLHIGHLKNYVIGDALTRYYVIRGYDVLHPFGWDAFGLPAENAAIKY 100

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G   + +   N    +   ++  I YD    + T +  ++   + L+  +  KG  Y+  
Sbjct: 101 GRHPREWTYGNIAESKKSLEIAGIMYDWSREVTTCDPDYYRWNQWLFLLLYRKGLAYRAK 160

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            +  +   D+    +++V   A+G+ + +    V+  E E +FFR++AY ++LL+
Sbjct: 161 ATVNWDPVDQTVLANEQV--DAEGRSWRSGAK-VEKRELEQWFFRITAYAERLLN 212


>gi|91209690|ref|YP_539676.1| leucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117622858|ref|YP_851771.1| leucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|237707384|ref|ZP_04537865.1| leucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|91071264|gb|ABE06145.1| leucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115511982|gb|ABJ00057.1| leucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|226898594|gb|EEH84853.1| leucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|315287086|gb|EFU46500.1| leucyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|15604929|ref|NP_219713.1| leucyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|6919979|sp|O84211|SYL_CHLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3328616|gb|AAC67801.1| Leucyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748339|gb|ADI50885.1| Leucyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749219|gb|ADI51897.1| Leucyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 819

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y        +++E+  G   DG Y   +    QW+       R++A+ D+LL
Sbjct: 150 MADMAVNYCPELGTVLSNEEIENGFSVDGGYPVERRMLRQWV------LRITAFADQLL 202


>gi|326626975|gb|EGE33318.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 891

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 234


>gi|300937884|ref|ZP_07152676.1| leucyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300457109|gb|EFK20602.1| leucyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|190894314|ref|YP_001984608.1| probable methionyl-tRNA synthetase protein [Rhizobium etli CIAT
           652]
 gi|190699975|gb|ACE94058.1| probable methionyl-tRNA synthetase protein [Rhizobium etli CIAT
           652]
          Length = 529

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 138/376 (36%), Gaps = 69/376 (18%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   +  +A   PN + H+GH   + ++ADV  R+HR+ G      TG DEHG      A
Sbjct: 5   QHTFFACSAPPCPNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G         +          +DI  D F+RT+ + H D    ++ ++         
Sbjct: 65  RKLGRPVDDVAHMHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLR-------- 116

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY------------------------------YNA 152
             SG+  LRD      +++Y G   ++                              +N 
Sbjct: 117 -ASGYVELRD-----GEQLYCGTCEEFAADSLAVGECPACNAPTDSNLCEDCGSALQHNL 170

Query: 153 QHNPVQWMEEEGYFFR--------LSAYQDKLLSYYESH--PEFILPIERRNEVISFVKS 202
             NP+     +    R        L  +   L    E+   PE I    +R E + +++S
Sbjct: 171 LRNPIHTTCGQSLILRPIRQVHFELEKFAPGLDHAIEASGWPESI----KRKE-LDWLRS 225

Query: 203 GLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWP 257
            L  L +SR  FD G+ +    +     +  W + L  Y T    L   +G+        
Sbjct: 226 KLMALPMSRH-FDRGVTLNYPVEVAGQTLMTWFEGLWCYETGIERLCKQNGADLDDTMRN 284

Query: 258 ADLHVI---GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           A   ++   G+D   ++ I   A L S    +P       F   +G K S S  + +   
Sbjct: 285 ASTRLVFFMGQDNRFYYTIGVTASLFSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWAD 344

Query: 315 EVIEEVGVDALRYFLV 330
           EV  ++  + LRY+L 
Sbjct: 345 EVAADIDTNVLRYYLA 360


>gi|294083997|ref|YP_003550754.1| Valyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663569|gb|ADE38670.1| Valyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 892

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 29/161 (18%)

Query: 189 PIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           P    NE  +F  +     KD+ L+R             + ++  W  +     +T G+ 
Sbjct: 429 PFVEENEADAFASAKAHYGKDVELNRD------------EDVLDTWFSSGLWPFSTLGWP 476

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPA-------FLLSANLPLPKKVFSHGFIL- 297
           ++ D  K +++P D+ V G DI+ F    W A         +   +P  ++V+ H  +  
Sbjct: 477 EDNDLVK-RYYPGDVLVTGFDIIFF----WVARMMMMSMHFMDGEVPF-REVYIHALVRD 530

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            KG+K+SKS GNVIDP+ +I++ G D LR+ L    A G+D
Sbjct: 531 EKGQKMSKSKGNVIDPLGIIDQYGADPLRFTLAAMAAQGRD 571



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 15/68 (22%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ----N 76
           H+GHA    + D+L R+HR+ G D L+  GTD           +AG+ T++ V++     
Sbjct: 54  HMGHALTFTLQDLLIRYHRMIGRDTLWQPGTD-----------HAGIATQMVVERKLAAE 102

Query: 77  SRNFRDMA 84
           + N RD+ 
Sbjct: 103 NVNRRDLG 110


>gi|290475178|ref|YP_003468064.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174497|emb|CBJ81291.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 821

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 33/238 (13%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P DL++ G +    H +Y            LL+++ P   ++F+ G +L  G K
Sbjct: 521 RADYWAPVDLYIGGIEHAILHLLYARFIHKVMRDEGLLTSDEPF-VRLFTQGMVLKDGSK 579

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGIGN 360
           +SKS GNV++P + I+  G D LR F++      +   +   G+    R    L N +  
Sbjct: 580 MSKSKGNVVNPQDYIDNYGADTLRLFMMFSAPPEQQLEWSDSGVDGAHRFIKKLWNTVHG 639

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
                +  I       I + G  T   +++       L+++ + M+ +L  + A+A V+ 
Sbjct: 640 HAEHCMPKI-------IHSSGIVTIEQKNLRRKLHETLKKVTDVMETRLSFNTAIAAVME 692

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L++  +++           +  D+A     V  EV+  + I+L   +P + + ++ +L
Sbjct: 693 LINTYNKF--------TVNSETDKA-----VVKEVLDNVVIMLSPIIPHVTHVLWHVL 737



 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 6/175 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y      YP+   H+GH     I D + R+ ++ G +V    G D  G     AA  
Sbjct: 37  EKFYSLCMFPYPSGNIHMGHVRNYSIGDAIIRYQKMCGKNVFQPMGWDAFGLPAENAAIK 96

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +  +N  N R     +   YD    I T    ++   + L+ ++ +KG  YK 
Sbjct: 97  NNTHPASWTYKNINNMRKQLKQMGYGYDWSREIATCSPDYYRWEQWLFLRLYEKGLAYKK 156

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                +   DE    +++V  G  G   +A    V+  E   +F +++ Y ++LL
Sbjct: 157 KSVVNWDPVDETVLANEQVINGR-GWRSDAL---VEKREISQWFLKITDYAEELL 207


>gi|253995955|ref|YP_003048019.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982634|gb|ACT47492.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 813

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 9/195 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH     I DVL+RFH++ G +V+   G D  G     AA
Sbjct: 31  DKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHKMKGFNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  + +     L +  D    I T +  ++   + L+ ++  KG IY
Sbjct: 91  IKNETAPAAWTYSNIEHMKAQLKQLGLGVDWNREIATCKPEYYKWEQWLFTELYKKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K   +  +   D     +++V    DG+ + +    V+  +   YF +++AY ++LL+  
Sbjct: 151 KKTSTVNWDPVDGTVLANEQVI---DGRGWRS-GALVEKRDIPQYFMKITAYAEELLNDL 206

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 207 DKLEGWPEQVKTMQR 221



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D +V G +    H +Y   F        L+  + P    + + G +L +G K
Sbjct: 513 RANYWLPVDQYVGGIEHAILHLLYARFFNKLMRDVGLIKNDEPF-TNLLTQGMVLKEGTK 571

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP E+I+  G D  R F++
Sbjct: 572 MSKSKGNTVDPQELIDTYGADTARLFMM 599


>gi|222529340|ref|YP_002573222.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782359|sp|B9MRZ5|SYI_ANATD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222456187|gb|ACM60449.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 920

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 35/273 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  + V +HGF++  +G+K+SKS GNVI P ++I E G D LR + V      ++   KD
Sbjct: 584 PY-RIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCVSADYTTDMRISKD 642

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                  + +++       +GNL   +       Y+ +        E D+  L    +++
Sbjct: 643 IIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYENL-------KEIDKWALQRLYKLI 695

Query: 399 QEIRENMQ----NQLIHRALAQVISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLYV 450
           +++ +  +    NQ+ H  L     ++   + Y D  K   +  K  + DR  A TV+Y 
Sbjct: 696 EKVTKAYEEYDYNQVYH--LVHNFCVIDMSNLYLDINKDRLYASKSESLDRRSAQTVMY- 752

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             E++  L IL+   +   A +I+  +   +E+
Sbjct: 753 --EILIALTILIAPILSFTAEEIWQNIIFKEED 783



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRN---FRDMADVLDISYDDFIRTTEKR 101
                V  K+ V+++  +   FR       +SY D  R   KR
Sbjct: 105 -----VIKKLEVNRHEVDPVEFRKKCKEFALSYIDIQRQQFKR 142


>gi|319777538|ref|YP_004137189.1| isoleucyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038613|gb|ADV34812.1| Isoleucyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 888

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ + ++       N D  K    P DL++ G D  R  F++    +   +   
Sbjct: 522 IMDVWFDSGSTFMAV-----NID--KGLETPYDLYLEGSDQFRGWFNSSLINSVAYNGKA 574

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + SHGF+L  KGEK+SKS GNV+DP+++I + G D LR ++
Sbjct: 575 PY-KNIVSHGFVLDAKGEKMSKSKGNVVDPLKIISKNGADILRLWV 619



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAA-------- 62
           Y N   HIGHA   I+ D++ R+  L G    +  G D HG     K+ + A        
Sbjct: 60  YANGNLHIGHALNKILKDIVIRYKSLRGFYAPYVPGWDTHGLPIEHKMLEEAHLKKNELS 119

Query: 63  -----QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                + A +  +  V++ +  F+ M  + D  +  +  T + +       L+KK+   G
Sbjct: 120 VVDLRKKAALYAQDQVNKQAEQFKSMQLLCD--FKKYYITKDPKFEAQQLRLFKKMIFSG 177

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   ++   + EV
Sbjct: 178 LIYKGLKPVYWSPSSQSALAEAEV 201


>gi|329942953|ref|ZP_08291732.1| leucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848119|emb|CBY17120.1| putative leucyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507025|gb|ADZ18663.1| leucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815213|gb|EGF85202.1| leucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914794|gb|AEB55627.1| leucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 820

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD+     T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTKKNIENFRKQLSAMGFSYDEGREFATSDPDYYRWTQKLFLFLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y    +  Y         ++EV  G   +G Y   +    QW+       R++AY D+LL
Sbjct: 149 YMADMAVNYCEELGTVLANEEVENGLSVEGGYPVERRMLRQWI------LRITAYSDQLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE +  ++R
Sbjct: 203 QGLEDLDWPENVKQLQR 219


>gi|308190205|ref|YP_003923136.1| isoleucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624947|gb|ADN69252.1| isoleucine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 888

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ + ++       N D  K    P DL++ G D  R  F++    +   +   
Sbjct: 522 IMDVWFDSGSTFMAV-----NID--KGLETPYDLYLEGSDQFRGWFNSSLINSVAYNGKA 574

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + SHGF+L  KGEK+SKS GNV+DP+++I + G D LR ++
Sbjct: 575 PY-KNIVSHGFVLDAKGEKMSKSKGNVVDPLKIISKNGADILRLWV 619



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAA-------- 62
           Y N   HIGHA   I+ D++ R+  L G    +  G D HG     K+ + A        
Sbjct: 60  YANGNLHIGHALNKILKDIVIRYKSLRGFYAPYVPGWDTHGLPIEHKMLEEAHLKKNELS 119

Query: 63  -----QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                + A +  +  V++ +  F+ M  + D  +  +  T + +       L+KK+   G
Sbjct: 120 VVDLRKKAALYAQDQVNKQAEQFKSMQLLCD--FKKYYITKDPKFEAQQLRLFKKMIFSG 177

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   ++   + EV
Sbjct: 178 LIYKGLKPVYWSPSSQSALAEAEV 201


>gi|297537782|ref|YP_003673551.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257129|gb|ADI28974.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 836

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH     I DVL+RFH++ G +V+   G D  G     AA
Sbjct: 31  DKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHKMKGFNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N  + +     L +  D    I T +  ++   + L+ ++  KG IY
Sbjct: 91  IKNNTAPAKWTYENIEHMKSQLKQLGLGVDWNREIATCKPEYYKWEQWLFTELFKKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   +  +   D     +++V    DG+ + +    V+  +   YF +++AY ++LL+
Sbjct: 151 KKTSTVNWDPVDGTVLANEQVI---DGRGWRSGAM-VEKRDIPQYFMKITAYAEELLN 204



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D +V G +    H +Y   F        L+  + P    + + G +L +G K
Sbjct: 536 RANYWLPVDQYVGGIEHAILHLLYARFFNKLMRDVGLIKNDEPF-INLLTQGMVLKEGTK 594

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP E+I+  G D  R F++
Sbjct: 595 MSKSKGNTVDPQELIDTYGADTARLFMM 622


>gi|237804554|ref|YP_002888708.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272854|emb|CAX09764.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 819

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y        +++E+  G   DG Y   +    QW+       R++A+ D+LL
Sbjct: 150 MADMAVNYCPELGTVLSNEEIENGFSVDGGYPVERRMLRQWV------LRITAFADQLL 202


>gi|225849502|ref|YP_002729667.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643602|gb|ACN98652.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 607

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     I DV+ R++R+ G + L   G D  G     AA
Sbjct: 30  KQNKYYVLEMFPYPSGKIHMGHVRNYAIGDVINRYYRMTGKNTLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G+    +  +N    +     L  SY  D  I T    ++   + L+ K+ +KG  Y
Sbjct: 90  IKSGIHPAKWTYENIDYMKSQLKRLGFSYDWDREIATCNPDYYKWNQWLFLKMFEKGIAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +      +   D     +++V    DG+ +      VQ  E   ++ +++ Y +KLL 
Sbjct: 150 RKSALVNWCPHDLTVLANEQV---IDGKCWRCGTQVVQ-KEIPSWYLKITDYAEKLLQ 203


>gi|24214025|ref|NP_711506.1| isoleucyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|81470207|sp|Q8F6I1|SYI_LEPIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24194894|gb|AAN48524.1| isoleucyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 914

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 14/108 (12%)

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I+ VW D+  +     G   D P        PADL+  G D  R  F +  WP+  L   
Sbjct: 528 ILDVWFDSGVSSFAVLGERKDEP--------PADLYFEGSDQHRGWFQSSLWPSMALRG- 578

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI-EVIEEVGVDALRYFL 329
           +P  K V +HG++L  KG  +SKSLGN IDP  +VI+  G D LR ++
Sbjct: 579 IPPYKTVLTHGYVLDEKGHPMSKSLGNGIDPTADVIQIYGADILRLWV 626


>gi|328955608|ref|YP_004372941.1| Isoleucyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455932|gb|AEB07126.1| Isoleucyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 934

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PADL++ G D  R  F +    +       P  + V S GF+L  +G K+SKSLGNVID
Sbjct: 567 YPADLYLEGSDQHRGWFQSSLLTSVAAEGTAPF-RGVVSQGFVLDGQGRKMSKSLGNVID 625

Query: 313 PIEVIEEVGVDALRYFLV-----REIACGKD 338
           P  + EE+G D +R ++       ++AC +D
Sbjct: 626 PNAICEEMGADIVRLWVASVDTSSDVACDRD 656



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 18/138 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   +     Y N   H+GHA   I  D++ R+  + G  V F  G D HGQ I   
Sbjct: 47  SEQESFVLHDGPPYANGPIHMGHAMNKIGKDMINRYWMMRGRQVHFVPGWDCHGQPIEHR 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
            +   + T+ F        R++      + +++    F R            T    HD 
Sbjct: 107 VEEK-LGTERFNRTPVERIRELCRRFAVENIEVQKAGFERLGVLADWDNPYLTLHHEHDA 165

Query: 106 CRI-LWKKISDKGDIYKG 122
             I ++K + D+G IY+G
Sbjct: 166 ADIEVFKSLFDQGMIYRG 183


>gi|289548851|ref|YP_003473839.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182468|gb|ADC89712.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 926

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 36/237 (15%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           AD+++ G D  R  F A    +     + P  + V +HGF +  +G K+SKSLGNV+ P 
Sbjct: 553 ADMYLEGSDQHRGWFQASLLESVASYGHAPY-RSVLTHGFTVDEQGRKMSKSLGNVVSPQ 611

Query: 315 EVIEEVGVDALRYFLVRE-----IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           EV++E G D LR ++V E     I  GK          K++   L   +GNL   ++   
Sbjct: 612 EVLKEYGADILRLWVVSEDYTEDIRLGKGILQRLAEDYKKIRNTLRFLLGNLYDFTIQNT 671

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------ 423
           + +Y  + P        D  ++S   +VL+++    Q    HR    + +  S       
Sbjct: 672 V-EYQNLHPL-------DRWMVSYLQKVLEKMHLYYQEYTFHRVFHLIRNFCSVELSSFY 723

Query: 424 ----VDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                DR Y  A   WE +      A TVLY   +++  L   +  F+   A +++D
Sbjct: 724 LDVLKDRLYVYAPDSWERRS-----AQTVLY---QLLIALTTGVAPFLSFTAEEVWD 772



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I+ DV+ ++  L G  V +  G D HG  I +  +      K+  +
Sbjct: 57  YANGHIHIGHALNKILKDVINKYWLLKGYRVDYVPGWDCHGLPIEQQVEKELKAKKIRKE 116

Query: 75  -----QNSRNFRDMAD-VLDISYDDFIR 96
                +  R  R+ A+  + I  ++F+R
Sbjct: 117 DLPKVEFRRLCREYAERFVQIQKEEFVR 144


>gi|261402721|ref|YP_003246945.1| valyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369714|gb|ACX72463.1| valyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 878

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 25/279 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +  T +LD+ D    K +P  L   G DI+R  A Y    +  L+   
Sbjct: 451 VLDTWMDSSITPMVITKWLDD-DKFFEKHYPVQLRPQGHDIIRTWAFYTIIKSVALTNKK 509

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +    +      F  K+
Sbjct: 510 PWEEIVINGMVFGEDGHKMSKSRGNVVEPDEIISKYGADALRLWASNSVVGDDVQFLWKE 569

Query: 345 ------GLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSR 396
                  L+K  NA           R   M + D   D +          D  ILS   R
Sbjct: 570 IDYAYRFLRKFWNA----------CRFAKMHISDDIIDELKKPVEIKNPVDLWILSKLQR 619

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ + ++++N   +  + ++   V     D Y +  K + L   + +      +    V
Sbjct: 620 LIERVDKDLENYRFN-TIVEIYKFVWHEFCDNYIEMVK-YRLYGDDEEAKKEARWTLYYV 677

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           I ++  LL  F P  ++ + DI  + + +  F  +D+R 
Sbjct: 678 IDKIVRLLSPFAPHFSDYMADIYKIDNLHFSFPEVDERF 716



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG       +     
Sbjct: 38  IDTPPPYPTGRLHLGHALNWTYIDIIARYKRMKGFNVLFPQGWDCHGLPTEVKVEEIHGI 97

Query: 69  TKVFVDQNSRNFRDMA 84
           TK  VD++   FR++ 
Sbjct: 98  TKSDVDRHK--FRELC 111


>gi|123437181|ref|XP_001309389.1| isoleucyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121891114|gb|EAX96459.1| isoleucyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 1069

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 12/221 (5%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLP---KKVFSHGFILHK-GEKISKSLGNVIDP 313
           AD    G D  R    ++   +LS+ L  P   K V  +G I+   G+K+SK   N  DP
Sbjct: 553 ADFIAEGLDQTR--GWFYTMTILSSLLGHPSPFKNVIVNGLIMAADGKKMSKKEKNYTDP 610

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +++  G DA+R +L    AC  D F  KD     +         N +   V  +++  
Sbjct: 611 ELIMDRFGADAVRLYLTNSPACHADPFSFKDDDVAMIVRQTMLPWMNSIKFWVEQVIRHG 670

Query: 374 DGMI-PTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           +     T  A++     D+ ILS  +R++Q +   M    ++  L +++  + +++ ++ 
Sbjct: 671 NNFKRNTELAYSSENILDKWILSKINRLIQHVHREMGLYQLYNVLPELVKFIDQLNNWYV 730

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
                 LKK     A T + V  EV+ QL++L+  F P  A
Sbjct: 731 RLNRDRLKKGK--DAETGIAVLFEVLLQLSLLMAPFAPFFA 769


>gi|56416673|ref|YP_153747.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821293|sp|Q5PB38|SYL_ANAMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56387905|gb|AAV86492.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 829

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA + G
Sbjct: 33  CYVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYG 92

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
           V   V+ ++N  + R     + ISY+
Sbjct: 93  VNPAVWTERNIESMRKQLKSIGISYN 118


>gi|16764025|ref|NP_459640.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167990657|ref|ZP_02571757.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|197265929|ref|ZP_03166003.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198242815|ref|YP_002214637.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|29337028|sp|Q8ZQZ6|SYL_SALTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690336|sp|B5FMP4|SYL_SALDC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16419160|gb|AAL19599.1| leucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197244184|gb|EDY26804.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937331|gb|ACH74664.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205330857|gb|EDZ17621.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261245921|emb|CBG23722.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|301157249|emb|CBW16736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911680|dbj|BAJ35654.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321226229|gb|EFX51280.1| Leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|189499524|ref|YP_001958994.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|229559916|sp|B3EMN5|SYL_CHLPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189494965|gb|ACE03513.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 806

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 13/181 (7%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+++R+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIISRYKRSRGHNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   KV  ++N  +F+D    +  SYD    I TT+  ++   + ++ ++ D+G  
Sbjct: 89  AIKTGTHPKVITEKNVSSFKDTLMRMGFSYDWNREINTTDPGYYAWTQWIFLQLLDRGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++   K ADG  +     P+ QW+       +++AY ++LL
Sbjct: 149 YTSEIDVNWCEELKTVLANEEVAEKVADG--HAVVRKPLRQWV------LKITAYAERLL 200

Query: 178 S 178
           S
Sbjct: 201 S 201



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 33/200 (16%)

Query: 243 GYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFS 292
           G  + P D  K ++W   DL+V G +    H +Y   W   L     +S   P  +K+F+
Sbjct: 507 GNTEKPVDPKKEQYWMNVDLYVGGAEHAVLHLLYARFWHKVLFDLGVVSTKEPF-QKLFN 565

Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G IL +  EK+SKS GNVI   +V+   G DA+R +         + F       K  N
Sbjct: 566 QGMILGEDNEKMSKSRGNVIPADQVLGSYGADAVRLY---------EMFLGPLEQVKPWN 616

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-----VCSRVLQEIRENMQ 406
            +   G+   +SR   +I        P PG+  E +E+ L+        + +++I ++ +
Sbjct: 617 TNGIEGVSRFLSRVWRLIY-------PEPGSMAELNEAPLTEDLTRTMHKAVKKITDHTE 669

Query: 407 NQLIHRALAQVISLVSEVDR 426
               + A+++++  V+E+ +
Sbjct: 670 QLKFNTAISEMMVFVNELHK 689


>gi|26246623|ref|NP_752663.1| leucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|227884378|ref|ZP_04002183.1| leucyl-tRNA synthetase [Escherichia coli 83972]
 gi|300989992|ref|ZP_07179068.1| leucyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300996688|ref|ZP_07181513.1| leucyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301049839|ref|ZP_07196778.1| leucyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331645800|ref|ZP_08346903.1| leucine--tRNA ligase [Escherichia coli M605]
 gi|26107022|gb|AAN79206.1|AE016757_110 Leucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|227838464|gb|EEJ48930.1| leucyl-tRNA synthetase [Escherichia coli 83972]
 gi|300298391|gb|EFJ54776.1| leucyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300304466|gb|EFJ58986.1| leucyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300407267|gb|EFJ90805.1| leucyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|315292088|gb|EFU51440.1| leucyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|320194176|gb|EFW68808.1| Leucyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|324006304|gb|EGB75523.1| leucyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324010466|gb|EGB79685.1| leucyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331044552|gb|EGI16679.1| leucine--tRNA ligase [Escherichia coli M605]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|262089308|gb|ACY24529.1| valyl-tRNA synthetase [uncultured crenarchaeote 57a5]
          Length = 781

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 28/295 (9%)

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P + +  V   VK G    +   +TFD               W+D+  + L  T Y  + 
Sbjct: 432 PWKDKAPVDKCVKCGFDKFTGDERTFD--------------TWMDSSISPLFITKYNRDE 477

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHK-GEKISK 305
           D    K +P  +    KDI+R    Y     + L+ NL    +V+  G+ + + GEK+SK
Sbjct: 478 DFF-VKTFPTQIRPQAKDIVRTWLYYTMLRCYQLTENLAW-SEVWIMGYGVDEYGEKMSK 535

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVS 363
           S GNVIDP  +I + G D  R++   E   G+D    +  +   ++    L N IG  VS
Sbjct: 536 SKGNVIDPFPIITKHGADTFRFWSATEANHGQDFRCSEQKIVEAQKFLTKLWN-IGRFVS 594

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            S   I      ++P+         ++++ C R  +E      N  I  +  +  +    
Sbjct: 595 -SFEFIPSHESDLLPSDKWILAELSNLITECMRGYKEY-----NFFIPASHIREFTWNIF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              Y +  K       + D  ++ LY   +    + +LL    P + +K++  ++
Sbjct: 649 ASHYLELVKSRAYNDNDSDSRNSALYALHKCFSVILLLLAPICPFITDKLWTTIY 703


>gi|241889244|ref|ZP_04776547.1| leucyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864081|gb|EER68460.1| leucyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 809

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK +      YP+ A  H+GH       D+L+R+ R +G +VL   G D  G    + A
Sbjct: 30  KEKFFALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F   N   FR     L  SY  D  + TT+  ++   + ++KK+ +KG  Y
Sbjct: 90  LDTGNDPRDFTKTNIDTFRRQIKELGFSYDWDREVNTTDPNYYKWTQWIFKKLYEKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                  W         N++ +    DG+     H PV+      +  +++ Y +KLL+
Sbjct: 150 VDEMPVNWCPALGTVLSNEEVI----DGKSERGGH-PVERRPMRQWVLKITDYAEKLLA 203



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK 299
           D  K K+W P D+++ G +    H +Y   W   L    L +P     +K+F+ G IL +
Sbjct: 514 DPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVLYDLGL-VPTREPFQKLFNQGMILAE 572

Query: 300 G-----EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           G     EK+SKS GNV++P ++I   G D LR +
Sbjct: 573 GKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVY 606


>gi|205351935|ref|YP_002225736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|238690483|sp|B5R7Z6|SYL_SALG2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|205271716|emb|CAR36548.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|168752659|ref|ZP_02777681.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188013578|gb|EDU51700.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|301025224|ref|ZP_07188793.1| leucyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300396153|gb|EFJ79691.1| leucyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|253990630|ref|YP_003041986.1| leucyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782080|emb|CAQ85244.1| leucyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIEYMKGQLKTLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++AY ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQV---VDGCCWRCD-TKVERKEIPQWFIKITAYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 TLEEWPEQVKTMQR 221


>gi|222475038|ref|YP_002563453.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
 gi|222419174|gb|ACM49197.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
          Length = 829

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA + G
Sbjct: 33  CYVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYG 92

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
           V   V+ ++N  + R     + ISY+
Sbjct: 93  VNPAVWTERNIESMRKQLKSIGISYN 118


>gi|167044664|gb|ABZ09335.1| hypothetical protein ALOHA_HF4000APKG7H23ctg2g5 [uncultured marine
           microorganism HF4000_APKG7H23]
          Length = 158

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 51/103 (49%)

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G++P PG   E+D+ ++      L+ +  +++      AL   ++L  E +RY DA+ PW
Sbjct: 3   GLVPDPGVLEEADQEMVQRTESALERVGASLEACRFREALQGAMALAHEANRYLDAKAPW 62

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + +   A+  L   +  I  L  +  +F+P  A ++ ++L
Sbjct: 63  RQVREDMGAAARTLSTALYAISGLKTMTYSFLPFSAQRLHELL 105


>gi|204930627|ref|ZP_03221557.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204320561|gb|EDZ05764.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322613219|gb|EFY10162.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621287|gb|EFY18144.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623707|gb|EFY20545.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628979|gb|EFY25758.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631701|gb|EFY28455.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637563|gb|EFY34265.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641903|gb|EFY38533.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646747|gb|EFY43253.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322651448|gb|EFY47828.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653101|gb|EFY49435.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658821|gb|EFY55076.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664909|gb|EFY61102.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668911|gb|EFY65063.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322670583|gb|EFY66716.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675324|gb|EFY71400.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322682205|gb|EFY78230.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684966|gb|EFY80963.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323193976|gb|EFZ79178.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197932|gb|EFZ83054.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202021|gb|EFZ87081.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207154|gb|EFZ92107.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213969|gb|EFZ98736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214319|gb|EFZ99070.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219276|gb|EGA03767.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225513|gb|EGA09743.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323231072|gb|EGA15188.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234096|gb|EGA18185.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238209|gb|EGA22267.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242557|gb|EGA26581.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248466|gb|EGA32400.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251319|gb|EGA35191.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323259247|gb|EGA42890.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261654|gb|EGA45229.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264836|gb|EGA48337.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272327|gb|EGA55734.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|56753341|gb|AAW24874.1| SJCHGC08049 protein [Schistosoma japonicum]
          Length = 167

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 9   ISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I++A+ Y N  PH+G+     + A V A +  L G +VL   GTDE+G      A +  +
Sbjct: 55  ITSALPYVNNVPHLGNMIGSTLSASVFALYCDLAGHNVLSICGTDEYGTATEAKAVSENM 114

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           T +   D+  +   ++     I +D F RTT  +H +  + L+K++ DKG
Sbjct: 115 TPREICDKYFKLHCEIYKWFQIEFDYFGRTTTTKHTEIVQELFKRLWDKG 164


>gi|295692697|ref|YP_003601307.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030803|emb|CBL50282.1| Isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 928

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++   +G +   +G     +PA+L++ G D  R  F++    +  ++   
Sbjct: 524 ILDVWFDSGTSW---SGVMSKREGLH---FPANLYLEGSDQYRGWFNSSLITSVAVTGQA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 578 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 624



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  ++G    +  G D HG  + +     G+  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGIDRKTM 115


>gi|260466804|ref|ZP_05812989.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029416|gb|EEW30707.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 874

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +  QN    R+   V+ +S D
Sbjct: 93  QNKVHPKEWTYQNIATMREQLKVMGLSLD 121



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P ++ +  G D  R+F++ +    +D  +  DG      A  A+    
Sbjct: 629 EKMSKSKKNTVSPEDITDGYGADTARWFMLSDSPPERDVEWTDDG------AAGAHRFMQ 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R VS   +   G+ P      E+  ++     ++L+ + E+++    +RA+A++  L
Sbjct: 683 RIWRLVSTAAETLAGVKPAAADNGEAG-AVSKAAHKILKAVGEDIEKLAFNRAIARIYEL 741

Query: 421 VS 422
            +
Sbjct: 742 AN 743


>gi|237747567|ref|ZP_04578047.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229378929|gb|EEO29020.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 968

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 12/106 (11%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+   +LT         GS AK   +PADL++ G D  R  FH+    + +L    P
Sbjct: 569 VWFDSGATHLTVL------RGSHAKELRFPADLYLEGSDQHRGWFHSSLLTSSMLDGCPP 622

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             K + +HGF++  +G+K+SKS+GNVI P +V + +G D LR ++ 
Sbjct: 623 Y-KMLLTHGFVVDGEGKKMSKSMGNVIAPQKVSDTLGADILRLWVA 667



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R +  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 63  RPQFILHDGPPYANGNIHIGHAVNKILKDIVVKSRGLAGFDAPYVPGWDCHGMPI 117


>gi|319411872|emb|CBQ73915.1| probable VAS1-valyl-tRNA synthetase [Sporisorium reilianum]
          Length = 1079

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 23/157 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     +  G+ +  D  K  F+P+ L   G DIL F    W A +      L
Sbjct: 596 VLDTWFSSGLWPFSIMGWPEKTDDLK-HFYPSSLLETGWDILFF----WVARMCMLGVYL 650

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +  LP  K+VF H  +    G K+SKSLGNVIDP++VIE +G+D L   L       K+G
Sbjct: 651 TGTLPF-KEVFCHAMVRDAHGRKMSKSLGNVIDPLDVIEGIGLDGLHTKL-------KEG 702

Query: 340 FYDKDGLKKRVNA---DLANGIGNLVSRSVSMILKDY 373
             D   + K       D   GI    + ++   L  Y
Sbjct: 703 NLDDKEIAKAAQGQKKDFPKGIPQCGTDALRFALCAY 739


>gi|312601590|gb|ADQ90845.1| Leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 790

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+K YI     YP+A   H+GH      +D++ARF RL+G DVL   G D  G    + A
Sbjct: 28  RKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQYA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G     F  +N  NF+        SYD
Sbjct: 88  IKTGNHPGEFTKRNIENFKKQIISFGFSYD 117



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 19/130 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK-GEKIS 304
           K+ P DL++ G++    H IY   W   L  A + +P     +K+   G +L   G+K+S
Sbjct: 507 KWLPVDLYIGGQEHAVGHLIYSRFWHRVLFDAGI-VPNSEPFQKIIHQGMLLGSDGQKMS 565

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I+P E+I++ G D +R FL+     G    +D++G+           I N + R
Sbjct: 566 KSKGNTINPTEMIDKFGADTIRIFLMFMGPIGDLRLWDENGVV---------SIFNWIQR 616

Query: 365 SVSMILKDYD 374
               IL DY+
Sbjct: 617 VQRTILADYE 626


>gi|315299184|gb|EFU58438.1| leucyl-tRNA synthetase [Escherichia coli MS 16-3]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|296532262|ref|ZP_06895004.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
 gi|296267413|gb|EFH13296.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
          Length = 956

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    +   + + P  K + +HGF+L   G K+SKSLGNV  P
Sbjct: 597 PADLYLEGSDQHRGWFHSSLLESVGANGHAPF-KAILTHGFVLDETGRKMSKSLGNVTAP 655

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            EV ++ G D LR +++      ++  GK+    +  L +R+   L   +G+L   S S 
Sbjct: 656 QEVTKQYGADILRLWVMNSDTADDLRIGKNILAQQAELYRRIRNTLRWLLGSLEGFSESE 715

Query: 369 IL 370
            L
Sbjct: 716 TL 717



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   ++ DV+ R  ++ G D  +  G D HG  I
Sbjct: 67  REKFVLHDGPPYANGALHIGHALNKVLKDVVNRSAQMSGRDANYIPGWDCHGLPI 121


>gi|302909101|ref|XP_003049999.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730936|gb|EEU44286.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 950

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 5/176 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+   H+GH     IADV+ARF  + G  V+   G D  G     AA 
Sbjct: 69  KDKHYVLPMFPYPSGTLHLGHLRVYTIADVVARFRTMKGDKVMLPMGWDAFGLPAENAAL 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N    ++  +V++ S  +D  + T + + +   + L+  +  +G  Y+
Sbjct: 129 ERGIAPGTWTTSNMAKMKEQLEVMNGSWDWDRELATCDPKFYKHTQKLFLMLYGRGLAYQ 188

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D+    +++V   A+G  + +    V+  + + +FFR+S +++ LL
Sbjct: 189 AEAEVNWDPVDKTVLANEQV--DANGCSWRSGAK-VEKRKLKQWFFRISEFREALL 241


>gi|254804338|ref|YP_003082559.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667880|emb|CBA03973.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 929

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H A+  ++S  SE           DR +  +     +++    
Sbjct: 696 RRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|144899871|emb|CAM76735.1| Valyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 888

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+ +      A+++P D+ V G DI+ F    W A ++      
Sbjct: 452 VLDTWFSSALWPFSTLGWPEQTP-ELARYYPTDVLVTGFDIIFF----WVARMMMMGIHF 506

Query: 282 -ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  K ++ H  +   KG+K+SKS GNVIDP++++++ G DA+R+ L    A G+D
Sbjct: 507 MGDVPF-KDIYIHALVRDEKGQKMSKSKGNVIDPLDLMDKYGCDAVRFTLAALAAQGRD 564



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA    + DVL R+HR+ G D L+  GTD           +AG+ T++ V++ 
Sbjct: 50 HMGHALTFTLQDVLIRYHRMAGRDALWQPGTD-----------HAGIATQMVVERQ 94


>gi|331682066|ref|ZP_08382690.1| leucine--tRNA ligase [Escherichia coli H299]
 gi|331080745|gb|EGI51919.1| leucine--tRNA ligase [Escherichia coli H299]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|325528571|gb|EGD05674.1| leucyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 864

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA 
Sbjct: 32  KPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG  
Sbjct: 92  ANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|312945189|gb|ADR26016.1| leucyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|304391388|ref|ZP_07373330.1| valyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295617|gb|EFL89975.1| valyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 1050

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
           T  W + +  DP  ++  W  +     +T G+ D      A  +  D+ V G DI+ F  
Sbjct: 602 TVLWNVDLYRDPD-VLDTWFSSALWPFSTLGWPDETP-ELASHYQTDVLVTGFDIIFF-- 657

Query: 273 IYWPAFLLSANLPLPK-----------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEV 320
             W A ++   L   K            V+ H  +  K G K+SKS GNVIDP+E+++E 
Sbjct: 658 --WVARMMMMGLHFMKDEDGKPVEPFHTVYVHALVRDKTGAKMSKSKGNVIDPLELMDEY 715

Query: 321 GVDALRYFLVREIACGKD 338
           G DALR+ L    A G+D
Sbjct: 716 GTDALRFTLAIMAAQGRD 733


>gi|300951141|ref|ZP_07165005.1| leucyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300959213|ref|ZP_07171290.1| leucyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301028879|ref|ZP_07192053.1| leucyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301643943|ref|ZP_07243970.1| leucyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331641145|ref|ZP_08342280.1| leucine--tRNA ligase [Escherichia coli H736]
 gi|299878150|gb|EFI86361.1| leucyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300314174|gb|EFJ63958.1| leucyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449570|gb|EFK13190.1| leucyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|301077713|gb|EFK92519.1| leucyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331037943|gb|EGI10163.1| leucine--tRNA ligase [Escherichia coli H736]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|300712316|ref|YP_003738130.1| valyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125999|gb|ADJ16338.1| valyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 871

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 16/199 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           +M  W+D+  + L   G+ D       +F P  L   G DI+R  A Y       L   +
Sbjct: 449 VMDTWMDSSISALHVAGWPDE------EFSPVQLREQGHDIIRTWAFYTILRTAALEEQI 502

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + + +       G K+SKS GN + P EV+EE G DA R    + IA G     D  
Sbjct: 503 PWEQALINGMVFGEDGNKMSKSRGNFVQPEEVVEEHGADAFR----QAIALGGQPGSDIQ 558

Query: 345 GLKKRVNADLANGIGNL--VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              K V +  +  +  L  +SR     L +    +  P A+ ++D  IL+    V +E+ 
Sbjct: 559 FQSKEVTS-ASRFLTKLWNISRFSDNHLDEDTPDVDAP-AYRDADRWILTELDSVAEEVE 616

Query: 403 ENMQNQLIHRALAQVISLV 421
            +M+      AL ++   V
Sbjct: 617 RDMEAYRFDAALRKIREFV 635



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AK 60
           ++R +  I T   YP    HIG+A      D  ARF RL G DVL+  G D HG     K
Sbjct: 30  EKRPEYVIDTPPPYPTGNLHIGNALGWCYMDFAARFQRLQGKDVLYPQGWDCHGLPTEVK 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMA 84
             +N G+      D +   FR++ 
Sbjct: 90  VEENQGIHR---TDVSREEFRELC 110


>gi|260597067|ref|YP_003209638.1| leucyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216244|emb|CBA29157.1| Leucyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 896

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 66  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 125

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 126 AVKNNTAPAPWTYDNINYMKNQLKMLGFGYDWSRELATCTPEYYRWEQQFFTELYKKGLV 185

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 186 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 240


>gi|148658611|ref|YP_001278816.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189083142|sp|A5V1W3|SYL_ROSS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148570721|gb|ABQ92866.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 5/175 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI     YP+   HIGH    +I D L R++ + G DVL   G D  G     AA   
Sbjct: 41  RRYILEMFPYPSGDLHIGHLKNYVIGDALTRYYVIRGYDVLHPFGWDAFGLPAENAAIKY 100

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G   + +   N    +   ++  I YD    + T    ++   + L+  +  KG  Y+  
Sbjct: 101 GRHPREWTYSNIAESKKSLEIAGIMYDWSREVTTCNPDYYRWNQWLFLLLYRKGLAYRAK 160

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            +  +   D+    +++V   A+G+ + +    V+  E E +FFR++AY ++LL+
Sbjct: 161 ATVNWDPVDQTVLANEQV--DAEGRSWRSGAK-VEKRELEQWFFRITAYAERLLN 212


>gi|328950747|ref|YP_004368082.1| Isoleucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451071|gb|AEB11972.1| Isoleucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 1051

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+         Y      +  + +PAD    G D  R  F++++    +L  +
Sbjct: 520 YVIDVWYDSGAMPFAQHHYPFEAQEAFQRGFPADFIAEGIDQTRGWFNSLHQLGTMLFDS 579

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +   + V  HG +L  KG+K+SKS GNV+DP E++   G DALR+++        D  + 
Sbjct: 580 VAY-RNVICHGLVLDEKGQKMSKSKGNVVDPWEIMNTFGADALRWYMYISAPPEADRRFG 638

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQE 400
              L + V  D    + N+ S  V+    D   +   P   A  E D  + S    +++E
Sbjct: 639 PS-LVREVVRDYFLTLWNVYSFFVTYANLDKPNLTARPALEARPEVDRWLASRVQELIEE 697

Query: 401 IRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           + E ++        RAL   +  V ++ +++  +      K          Y T+ E + 
Sbjct: 698 VTEALEAYDPTAASRALRNFV--VEDLSQWYVRRNRRRFWKNADAADREAAYATLWEALV 755

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +  L   F P LA  ++  L
Sbjct: 756 AVTHLTAPFTPYLAEALYQNL 776


>gi|323170770|gb|EFZ56420.1| leucyl-tRNA synthetase [Escherichia coli LT-68]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|300817839|ref|ZP_07098053.1| leucyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300823042|ref|ZP_07103176.1| leucyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300907819|ref|ZP_07125435.1| leucyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300927256|ref|ZP_07142986.1| leucyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301302123|ref|ZP_07208256.1| leucyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301329167|ref|ZP_07222162.1| leucyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|331666995|ref|ZP_08367869.1| leucine--tRNA ligase [Escherichia coli TA271]
 gi|331676301|ref|ZP_08377013.1| leucine--tRNA ligase [Escherichia coli H591]
 gi|300400451|gb|EFJ83989.1| leucyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300416790|gb|EFK00101.1| leucyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300524391|gb|EFK45460.1| leucyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300529536|gb|EFK50598.1| leucyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300842675|gb|EFK70435.1| leucyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300844490|gb|EFK72250.1| leucyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|315255053|gb|EFU35021.1| leucyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|331066219|gb|EGI38103.1| leucine--tRNA ligase [Escherichia coli TA271]
 gi|331076359|gb|EGI47641.1| leucine--tRNA ligase [Escherichia coli H591]
 gi|332104134|gb|EGJ07480.1| leucyl-tRNA synthetase [Shigella sp. D9]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|255322301|ref|ZP_05363447.1| valyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300674|gb|EET79945.1| valyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 875

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 24/233 (10%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SANLPLP-KKVFSHGFIL-HKGEK 302
           +G  A+F+P +L + G DIL F    W A ++    +A   LP   ++ H  +   +G K
Sbjct: 478 EGDLAEFYPNNLLITGFDILFF----WVARMMFQGENALGKLPFDDIYLHALVKDEQGRK 533

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP+  IEE   D LR+ L      G+D     + +K      + N    L 
Sbjct: 534 MSKSLGNVIDPLVSIEEYSADILRFTLALLAVQGRDIKLSDEKMKL-----VRNFTNKLY 588

Query: 363 SRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + S  ++L +     +      T+  + +LS  +  ++E+REN+     + A   +   +
Sbjct: 589 NASKYLLLNESKFANLSDAKIETKLGKYMLSRFNECVREVRENIDAYRFNDAANAIYKFL 648

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              D + D    W ++ +  D+ S        + ++   LL  F+P ++  +F
Sbjct: 649 --WDEFCD----WGIELSKADKGSVKELGA--IFKEAMRLLSPFMPFISEYLF 693


>gi|194476636|ref|YP_002048815.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
 gi|171191643|gb|ACB42605.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
          Length = 878

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 5/175 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+ + H+GH    +I DV+AR  R+ G  VL   G D  G     AA  
Sbjct: 40  EAFYALSMFPYPSGKLHMGHVRNYVITDVIARAQRMRGKRVLHPMGWDAFGLPAENAAIE 99

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    + + N +  R   D L +S D    I T  + ++   + L+ +  D G  Y+ 
Sbjct: 100 RGIDPSKWTNTNIQQMRKQLDQLGLSIDWEREISTCNEDYYRWTQWLFLQFYDAGLAYQQ 159

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             +  +   D+    +++V    DG  + +    V+  +   +F R++ Y + LL
Sbjct: 160 EATVNWDPIDQTVLANEQV--NGDGCSWRSGAK-VEKRKLRQWFLRITNYAEILL 211



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GN +DP  VIE  G D  R F++ +    KD  +++  ++ +           
Sbjct: 630 EKMSKSKGNGVDPTRVIEHFGADTARMFILFKAPPEKDLEWNESDVEGQFR------FLQ 683

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            +SR V M+LK         G      E +    S  +   + N   Q +HRA    I+ 
Sbjct: 684 RISRLVEMVLKK--------GIRLNLKEDL----STTINSKKLNKDEQEVHRATHYAIAA 731

Query: 421 VSE-VDRYFDAQKP-WELKKTNPDRASTVLYVT----VEVIRQLAILLQAFVPKLANKIF 474
           ++E +D          EL K N   +S    ++    +E ++ L ILL  F P L+ +++
Sbjct: 732 ITEDLDGEVQLNTAIAELMKLNNILSSVSDSISEPIILEGLKTLIILLAPFAPHLSEELW 791

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTF 503
             L V D N         L P  ++ +  
Sbjct: 792 SRL-VNDSNSIHNQRWPILDPSALIQENI 819


>gi|126179518|ref|YP_001047483.1| valyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862312|gb|ABN57501.1| valyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 863

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 24/257 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W+D+  + L  TG+    DG+ K  F+PA +   G DI+R  A Y    A  L   
Sbjct: 449 VLDTWMDSSISVLHVTGW----DGTGKPPFFPAQIRPQGHDIIRTWAFYTILRAKALVGG 504

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P   ++  +G +L + G K+SKS  N+I P  ++ + G DALR +     A G D  ++
Sbjct: 505 HPW-DEILVNGMVLGEDGFKMSKSRSNIISPEAIVGDYGADALRQWGAGGAATGSDIMFN 563

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEI 401
            + +     +     + N+    +  + K  D   P     TE +D  +L   S  + E+
Sbjct: 564 WNDVV--AASRFQTKLWNIFRFVMGHLEKGADPDAPV----TELTDRWLLVRLSETVAEV 617

Query: 402 RENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQ 457
              M+     RAL  +      +  D Y +  K   L   +  RAS  + L +T++V   
Sbjct: 618 TAAMEGYQFDRALRAIREFAWNTLADDYIEIVKG-RLYAADSSRASACSALRMTMDV--- 673

Query: 458 LAILLQAFVPKLANKIF 474
           L  LL   +P  A + +
Sbjct: 674 LCRLLAPIIPHFAEECY 690



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           + +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG     K  
Sbjct: 37  KPRFIIDTPPPYPTGNFHIGNALNWCYIDFIARYKRMRGYNVMFPQGWDCHGLPTEVKVE 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G+T     D     FR+M   L +S  + +R T +R
Sbjct: 97  ETYGITKN---DVPREKFREMCRDLTLSNIEKMRATMRR 132


>gi|1778560|gb|AAB40843.1| leucine tRNA synthetase [Escherichia coli]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|295425123|ref|ZP_06817828.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065182|gb|EFG56085.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 927

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++    G +   DG     +PADL++ G D  R  F++    +   +   
Sbjct: 523 ILDVWFDSGTSW---AGVMRKRDGL---HFPADLYLEGSDQYRGWFNSSLITSVATTGLA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  K+V S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ +
Sbjct: 577 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKKMGAEIIRLWVAQ 623



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 26/58 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + N   H+GHA   I  D++ R+  +DG    +  G D HG  + +     GV  K  
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMDGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTM 115


>gi|170291002|ref|YP_001737818.1| valyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175082|gb|ACB08135.1| Valyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 775

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 9/114 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W D+  + L   GYL N D  K K  P+DL   GKDI+R    Y     L  +  L ++
Sbjct: 460 TWFDSSISPLVYNGYLWNDDIFK-KLGPSDLRPQGKDIVRTWLHY---TFLRVHQILGRQ 515

Query: 290 VFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            F H ++       +G  + KSLGNVI P  + E+ G DA+R+F   E   G D
Sbjct: 516 AFKHVWLSGMGLDAQGRAMHKSLGNVIYPWPLFEKYGADAVRFFGAAEAHHGSD 569


>gi|56414217|ref|YP_151292.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363140|ref|YP_002142777.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81821581|sp|Q5PM88|SYL_SALPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238689935|sp|B5BCE6|SYL_SALPK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56128474|gb|AAV77980.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094617|emb|CAR60139.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|83311346|ref|YP_421610.1| valyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946187|dbj|BAE51051.1| Valyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 889

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 12/92 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS------ANLPLPKKVFSHGFIL-HKGEKISKS 306
           +++P D+ V G DI+ F    W A ++        ++P  + ++ H  +   KG+K+SKS
Sbjct: 480 RYYPGDVLVTGFDIIFF----WVARMMMMGIHFMGDVPF-RDIYIHALVRDEKGQKMSKS 534

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            GN+IDP+++IE+ G DALR+ L    A G+D
Sbjct: 535 KGNIIDPLDLIEKYGCDALRFTLSALAAQGRD 566



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 13/76 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + DVL R+ R+ G D L+  GTD           +AG+ T++ V++     
Sbjct: 52  HMGHALTFTLQDVLIRYRRMTGKDALWQPGTD-----------HAGIATQMVVERQLEAQ 100

Query: 81  RDMADVLDISYDDFIR 96
           +      D+  D+FI+
Sbjct: 101 K--VTRHDLGRDNFIK 114


>gi|303325705|ref|ZP_07356148.1| valine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863621|gb|EFL86552.1| valine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 888

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ ++  A+++P  + V G DI+ F    W A ++   L
Sbjct: 448 VLDTWFSSALWPFSTMGW---PEQTRDLARWYPTSVLVTGFDIIFF----WVARMMMMGL 500

Query: 285 PLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              K+V      LH       G K+SKS GNVIDP+ +IE+ G D+LR+ L    A G+D
Sbjct: 501 HFMKQVPFRDVYLHALVRDATGRKMSKSTGNVIDPLLMIEKYGCDSLRFTLTAFAAMGRD 560



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 21/167 (12%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           S  I  PN     HIGHA  + + DVL R  R  G +VL+  GTD  G      + +A  
Sbjct: 40  SIVIPPPNVTGALHIGHALNLTLIDVLCRHARQKGKNVLWVPGTDHAGIATQNVVERALA 99

Query: 64  NAGVTTK-----VFV--------DQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRIL 109
             G T +      FV        D   R    +  +   + +     T ++      R +
Sbjct: 100 KEGKTRRDLGREAFVEKVWEWRADYGHRILNQIGALGCSVDWTRLRFTMDEGLSAAVRKV 159

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHN 155
           + ++ D+G IYKG Y   +  R      DDEV ++ + G+ ++ +++
Sbjct: 160 FVQLYDEGLIYKGHYIINWCSRCHTALADDEVEHEQSRGRLWSVRYH 206


>gi|191173981|ref|ZP_03035499.1| leucyl-tRNA synthetase [Escherichia coli F11]
 gi|190905757|gb|EDV65378.1| leucyl-tRNA synthetase [Escherichia coli F11]
 gi|330910402|gb|EGH38912.1| leucyl-tRNA synthetase [Escherichia coli AA86]
          Length = 891

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|187918687|ref|YP_001884254.1| isoleucyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|259511496|sp|B2S1H8|SYI_BORHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119861535|gb|AAX17330.1| hypothetical protein BH0833 [Borrelia hermsii DAH]
          Length = 1044

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 8/201 (3%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDG 345
           K V  +G +L   G K+SKSL N  DP+EVI   G DALR +LV       D   Y  DG
Sbjct: 579 KNVIVNGLVLSSDGRKMSKSLRNYTDPMEVINTFGADALRLYLVMSPVVRADDLKYSDDG 638

Query: 346 LK---KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           +K   K +   + N     ++ ++    +    ++         D+ I+S    + + + 
Sbjct: 639 VKDVLKNIIIPIWNAYSFFITYAIIDKFEPNSNIVLYKTNIL--DKWIISEIESLKKTLN 696

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAIL 461
           E +    + +++ ++++ + +++ ++  +      K+  D      Y T+   ++ L ++
Sbjct: 697 EEIDKYNLTKSIEELLAFIDKLNNWYIRRSRRRFWKSENDNDKIDAYETLYYALKNLMLM 756

Query: 462 LQAFVPKLANKIFDILFVADE 482
           L  F+P L  +I+  L   DE
Sbjct: 757 LAPFIPFLTEEIYQNLKTKDE 777


>gi|72080974|ref|YP_288032.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914098|gb|AAZ54009.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 790

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+K YI     YP+A   H+GH      +D++ARF RL+G DVL   G D  G    + A
Sbjct: 28  RKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQYA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G     F  +N  NF+        SYD
Sbjct: 88  IKTGNHPGEFTKRNIENFKKQIISFGFSYD 117



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 19/130 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK-GEKIS 304
           K+ P DL++ G++    H IY   W   L  A + +P     +K+   G +L   G+K+S
Sbjct: 507 KWLPVDLYIGGQEHAVGHLIYSRFWHKVLFDAGI-VPNSEPFQKIIHQGMLLGSDGQKMS 565

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I+P E+I++ G D +R FL+     G    +D++G+           I N + R
Sbjct: 566 KSKGNTINPTEMIDKFGADTIRIFLMFMGPIGDLRLWDENGVV---------SIFNWIQR 616

Query: 365 SVSMILKDYD 374
               IL DY+
Sbjct: 617 VQRTILADYE 626


>gi|71893995|ref|YP_279441.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852122|gb|AAZ44730.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 790

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+K YI     YP+A   H+GH      +D++ARF RL+G DVL   G D  G    + A
Sbjct: 28  RKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQYA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G     F  +N  NF+        SYD
Sbjct: 88  IKTGNHPGEFTKRNIENFKKQIISFGFSYD 117



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 19/129 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK-GEKIS 304
           K+ P DL++ G++    H IY   W   L  A + +P     +K+   G +L   G+K+S
Sbjct: 507 KWLPVDLYIGGQEHAVGHLIYSRFWHKVLFDAGI-VPNSEPFQKIIHQGMLLGSDGQKMS 565

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I+P E+I++ G D +R FL+     G    +D++G+           I N + R
Sbjct: 566 KSKGNTINPTEIIDKFGADTIRIFLMFMGPIGDLRLWDENGVV---------SIFNWIQR 616

Query: 365 SVSMILKDY 373
               IL DY
Sbjct: 617 VQRTILADY 625


>gi|134294734|ref|YP_001118469.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166230620|sp|A4JBI1|SYL_BURVG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134137891|gb|ABO53634.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 864

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +    +D      + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPMYYLRITQYADELLN 204


>gi|331656669|ref|ZP_08357631.1| leucine--tRNA ligase [Escherichia coli TA206]
 gi|331054917|gb|EGI26926.1| leucine--tRNA ligase [Escherichia coli TA206]
          Length = 891

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|308274791|emb|CBX31390.1| Isoleucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 942

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           WPADL++ G D  R  FH+    A       P  K V +HGF++   G+K+SKSLGNVI 
Sbjct: 555 WPADLYLEGSDQHRGWFHSSLLTAVGTRGKAPY-KSVLTHGFVVDADGKKMSKSLGNVIA 613

Query: 313 PIEVIEEVGVDALRYFL 329
           P +VI++ G + LR ++
Sbjct: 614 PKKVIDKYGAEILRLWV 630


>gi|206900916|ref|YP_002250812.1| valyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740019|gb|ACI19077.1| valyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 881

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 119/267 (44%), Gaps = 17/267 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +    L T G+ ++ +     F+P  +    +DI+      W A ++   L  
Sbjct: 449 VLDTWFSSALWPLGTLGWPEDTEDLNY-FYPTSVLSTARDIINL----WVARMIMMGLEF 503

Query: 287 PKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                   V+ H  +L  +G+++SKS G  +DP+E+I + G D  R+ L  +    +D  
Sbjct: 504 KGDIPFYYVYVHPTVLTREGKRMSKSKGTGVDPLELINKYGADVTRFGLAIQCTEMQDLR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVL 398
           + ++  +   N    N I N     +S +    +Y+ +  +  + + SD+ IL+   +V+
Sbjct: 564 FHEENFENTKN--FTNKIWNAARFVISNLDFNLNYNEVDLSKHSLSLSDKWILTRLQKVI 621

Query: 399 QEIRENMQNQLIHRALAQVISLV-SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +E+ E+++N      +  + +   SE  D Y +  KP      +P+       +   V++
Sbjct: 622 REVTEHLENFRFSEYVKTIYNFFWSEFCDWYIELSKPRLSSTEDPESKLIAQVILWRVLK 681

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
           +   LL   +P +  +I+  L   DE+
Sbjct: 682 ESMQLLHPVMPFITEEIWQKLPSTDES 708



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  +  PN     H+GHA    I D+L R+ R+ G + L+  GTD           +AG+
Sbjct: 40 SIVLPPPNITGSLHMGHALNATIQDILIRWRRMQGFNALWIPGTD-----------HAGI 88

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 89 ATQMVVER 96


>gi|207856114|ref|YP_002242765.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238690399|sp|B5QVP9|SYL_SALEP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|206707917|emb|CAR32205.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|167550814|ref|ZP_02344570.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168231663|ref|ZP_02656721.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168240497|ref|ZP_02665429.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168820229|ref|ZP_02832229.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194446717|ref|YP_002039891.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194451728|ref|YP_002044682.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194468874|ref|ZP_03074858.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197250962|ref|YP_002145624.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|200390690|ref|ZP_03217301.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|224582484|ref|YP_002636282.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238911599|ref|ZP_04655436.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|238690007|sp|B5EZ89|SYL_SALA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690244|sp|B4TB51|SYL_SALHS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693559|sp|B4SYK7|SYL_SALNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782512|sp|C0PW78|SYL_SALPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194405380|gb|ACF65602.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194410032|gb|ACF70251.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194455238|gb|EDX44077.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197214665|gb|ACH52062.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|199603135|gb|EDZ01681.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205324136|gb|EDZ11975.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205334016|gb|EDZ20780.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205340156|gb|EDZ26920.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205343170|gb|EDZ29934.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|224467011|gb|ACN44841.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320084918|emb|CBY94708.1| Leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|330960154|gb|EGH60414.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 868

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|329850466|ref|ZP_08265311.1| valyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840781|gb|EGF90352.1| valyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 901

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D  D  K +F+P    + G DI+     +W A ++   L  
Sbjct: 467 VLDTWFSSALWPFSTMGWPDKTDDLK-RFYPTHTLITGFDII----FFWVARMMMMGLHF 521

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 K+VF +  +   KG+K+SKS  NV+DP+ +I+E G DALR+ +      G+D
Sbjct: 522 TGEAPFKRVFINALVRDEKGQKMSKSKNNVMDPLVLIDEFGADALRFTMTAMSGQGRD 579



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + DVL RF R+ G   L+  GTD           +AG+
Sbjct: 37 SIVIPPPNVTGNLHVGHALNNTLQDVLTRFERMRGKAALWLPGTD-----------HAGI 85

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 86 ATQMVVERQ 94


>gi|325292070|ref|YP_004277934.1| Isoleucyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325059923|gb|ADY63614.1| Isoleucyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 967

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 570 ILDVWFDSGCTHTFT--LEDRPDMK----WPADVYLEGSDQHRGWFHSSLLESCATRGRA 623

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  +G K SKSLGNV+ P +V++E G D LR +++
Sbjct: 624 PY-NAVVTHGFTMDEQGRKQSKSLGNVVAPQDVMKESGADILRLWVM 669



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG     KI 
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDANYVPGWDCHGLPIEWKIE 113

Query: 60  KAAQNAGVTT-KVFVDQNSRNFRDM-ADVLDISYDDFIRT----------TEKRHHDTCR 107
           +A +  G    +V V++  +  R+  A  + +  ++F R           T    H   R
Sbjct: 114 EAYRAKGKNKDEVPVNEFRKECREFAAGWIKVQSEEFKRLGIEGDFENPYTTMNFHAEAR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELLKIAKSGQLYRGSKPIMWSVVERTALAEAEV 209


>gi|258645206|ref|ZP_05732675.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402556|gb|EEW96103.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 829

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 6/183 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+   H+GH     I DV+ARF  + G +V+   G D  G     AA 
Sbjct: 39  KKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKSMQGFNVIHPMGYDAFGMPAENAAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  N       L +SYD    + T  + ++   + L++    +G  YK
Sbjct: 99  QHGIAPAEWTYANIENMTRQQKELGLSYDWEREVLTCREDYYKHTQNLFEIFYKRGLAYK 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V    +G+ +  + NPV       +F +++ Y D+LL+  +
Sbjct: 159 KEAKVNWCDHCHTVLANEQV---EEGKCWRCK-NPVVKKNLSQWFLKITDYADRLLADLD 214

Query: 182 SHP 184
             P
Sbjct: 215 HMP 217



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIYWPAFLL------SANLPLP-KKVFSHGFILHKGEK 302
            K  +W P D ++ G +    H +Y   F+         + P P   +   G +L  G K
Sbjct: 530 GKTDYWMPVDQYIGGIEHAILHLLYSRFFMKVLQDEGMVDYPEPFTNLLCQGMVLKDGGK 589

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+ P E++ + G D  R F++      KD  +   G++         G    +
Sbjct: 590 MSKSVGNVVSPEEIVGKYGADTARLFILFAAPPEKDLEWSDQGVE---------GSYRFL 640

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            R  +++ K  +      G  +  + ++     + + ++ E++  +   + A++ ++ LV
Sbjct: 641 KRVWTIVGKYQELGKELKGMLSPDEVALRRRLHQSIAKVTEDLDGKFAFNTAISAIMELV 700

Query: 422 SEVDRY 427
           +E+ R+
Sbjct: 701 NEMYRF 706


>gi|194434450|ref|ZP_03066711.1| leucyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417301|gb|EDX33409.1| leucyl-tRNA synthetase [Shigella dysenteriae 1012]
          Length = 891

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|157146740|ref|YP_001454059.1| leucyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083945|gb|ABV13623.1| hypothetical protein CKO_02514 [Citrobacter koseri ATCC BAA-895]
          Length = 868

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 212


>gi|150398390|ref|YP_001328857.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166231646|sp|A6UEE2|SYL_SINMW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150029905|gb|ABR62022.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 876

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV    +  QN  + +    V+ +S D   +F  T +  ++   + L+    +KG +Y
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKVMGLSLDWSREFA-TCDPEYYQRQQHLFLDFLEKGLVY 151

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            K     W  + +    N+  +    DG+ + +    V+  E   +FFR++ +
Sbjct: 152 RKQSKVNWDPVDNTVLANEQVI----DGRGWRSGAL-VEQRELTQWFFRITDF 199



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++         G   
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPDRDVIWSEAGVE---------GAHR 681

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +  +G+     A     E  ++     R L+ +  +      ++A+A++ 
Sbjct: 682 FVQRVWRLLSEAAEGLSAAEAAPAREGEGLAVSQAAHRTLKAVEADYDKLAFNKAVARIY 741

Query: 419 SLVS 422
            LV+
Sbjct: 742 ELVN 745


>gi|88705745|ref|ZP_01103455.1| Leucyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700258|gb|EAQ97367.1| Leucyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 819

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 25/192 (13%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  KA +W P D +V G +    H +Y   F        LLS++ P   ++ + G +L  
Sbjct: 517 DKEKADYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGLLSSDEPF-TRLLTQGMVLKD 575

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN +DP  +I+  G D +R F +      +   + +DG++         G  
Sbjct: 576 GAKMSKSKGNTVDPQSLIDSHGADTVRLFSLFAAPPDQSLEWSEDGVE---------GAQ 626

Query: 360 NLVSRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENM-QNQLIHRAL 414
             V R   ++ +  D   P P     A  + +  +       + ++ ++M + Q  + A+
Sbjct: 627 RFVKRLWRLVHEHTD-QGPAPALDSAALNDGERDVRRKIHETIAKVSDDMGRRQTFNTAI 685

Query: 415 AQVISLVSEVDR 426
           A V+ L +E+ R
Sbjct: 686 AAVMELCNELSR 697



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 15/198 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K Y  +   YP+ + H+GH     I+D +AR+ R+ G +VL   G D  G     AA
Sbjct: 31  EGDKFYCLSMFPYPSGKLHMGHVRNYSISDAIARYQRMLGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  + R+    L  S+  D  + T    ++   +  + ++ +KG +Y
Sbjct: 91  IANKTAPAKWTYSNIGHMREQLKALGFSFDWDRELATCTPEYYRWEQWFFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P QW      F R++AY ++LL
Sbjct: 151 KKMATVNWDPVDQTVLANEQVIDGRGWRSGALIERREIP-QW------FIRITAYAEELL 203

Query: 178 S---YYESHPEFILPIER 192
                 E  PE +  ++R
Sbjct: 204 KDLDTLEGWPEPVRIMQR 221


>gi|331672181|ref|ZP_08372973.1| leucine--tRNA ligase [Escherichia coli TA280]
 gi|331070648|gb|EGI42011.1| leucine--tRNA ligase [Escherichia coli TA280]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|323952780|gb|EGB48648.1| leucyl-tRNA synthetase [Escherichia coli H252]
 gi|323958401|gb|EGB54107.1| leucyl-tRNA synthetase [Escherichia coli H263]
          Length = 891

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|293413938|ref|ZP_06656587.1| leucyl-tRNA synthetase [Escherichia coli B185]
 gi|300920543|ref|ZP_07136969.1| leucyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|309795491|ref|ZP_07689908.1| leucyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|291433996|gb|EFF06969.1| leucyl-tRNA synthetase [Escherichia coli B185]
 gi|300412482|gb|EFJ95792.1| leucyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|308120866|gb|EFO58128.1| leucyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|324016071|gb|EGB85290.1| leucyl-tRNA synthetase [Escherichia coli MS 117-3]
          Length = 907

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|62185201|ref|YP_219986.1| leucyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312636|sp|Q5L5Q6|SYL_CHLAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|62148268|emb|CAH64033.1| putative leucyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 820

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD+     T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTKKNIENFRKQLSAMGFSYDEAREFATSDPEYYRWTQKLFLFLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y    +  Y         ++EV  G   +G Y   +    QW+       R++AY D+LL
Sbjct: 149 YMADMAVNYCEELGTVLANEEVENGLSIEGGYPVERRMLRQWI------LRITAYADQLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE +  ++R
Sbjct: 203 QGLEDLDWPENVKQLQR 219


>gi|323938404|gb|EGB34658.1| leucyl-tRNA synthetase [Escherichia coli E1520]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|312875953|ref|ZP_07735942.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797151|gb|EFR13491.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 920

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 584 PY-KIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629



 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                   +  VD     FR       ++Y D  R   KR
Sbjct: 105 VIKKFGVNRHEVD--PVEFRKKCKEFALNYIDIQREQFKR 142


>gi|238893709|ref|YP_002918443.1| leucyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238546025|dbj|BAH62376.1| leucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 868

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 212


>gi|222032402|emb|CAP75141.1| Leucyl-tRNA synthetase [Escherichia coli LF82]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|13476816|ref|NP_108385.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14027577|dbj|BAB53846.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 1003

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + ++ T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 601 ILDVWFDSGSTHVFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 654

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V +HGF + + G K+SKSLGN + P +VI++ G D LR ++V         +++ 
Sbjct: 655 PY-DTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVV------TTDYWED 707

Query: 344 DGLKKRV---NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             L K V   N D    + N +   +  +  D    +P   A  E +  +L   + + + 
Sbjct: 708 QRLGKNVLQTNIDAYRKLRNTIRWMLGTLAHDDGETVPLE-AMPELERLMLHRLAELDEV 766

Query: 401 IREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +R+     + + I RAL   + +V     YFD +K   L    P  +S     +V+V+R 
Sbjct: 767 VRQGYDAFEFKRITRALVDFM-VVELSAFYFDIRKD-ALYCDAP--SSVKRKASVQVVRH 822

Query: 458 L-AILLQAFVPKL 469
           L   L++   P L
Sbjct: 823 LFDCLVKWLAPML 835



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 64  RTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSTYVPGWDCHGLPI 118


>gi|331000453|ref|ZP_08324128.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329571785|gb|EGG53465.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 877

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y+   + YP+ + H+GH     + DVL R+ R+ G++V+   G D  G     A
Sbjct: 36  KEKPKFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRGMNVMTPMGWDSFGLPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  + +   + L +++D    + T +  ++   + ++ K+ +KG  
Sbjct: 96  AIAKKVAPAKWTYDNIADMKAQMEPLGLAFDWSREVTTCKPDYYRWNQWMFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+   +  +   D     +++V +G  G    A    V+  E  GY+  ++ Y ++LL
Sbjct: 156 YRKTQTVNWDPVDHTVLANEQVIEGR-GWRSGAI---VEKREIPGYYLGITQYAEELL 209


>gi|268317598|ref|YP_003291317.1| isoleucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335132|gb|ACY48929.1| isoleucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 1077

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 30/289 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           ++PD    ++ VW D+         Y  +N +  +  F PAD    G D  R  F+ ++ 
Sbjct: 528 RVPD----LIDVWFDSGAMPFAQWHYPFENQEAFRRTF-PADFIAEGVDQTRGWFYTLHA 582

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A ++  ++   + V  +G +L  KGEK+SKS GNV+DP +V+E  G D +R++++    
Sbjct: 583 IATMVMDSVAF-RHVVVNGLVLDEKGEKMSKSKGNVVDPFDVVERYGADPVRWYMISNAP 641

Query: 335 CGKDGFYDK---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTP----GAFTES 386
             ++  + +   +  ++R    L N      + +      + DG + P      G  TE 
Sbjct: 642 PWENIRFSERELEATRRRFFNTLENVYAFFATYA------NVDGFVYPAERMPVGERTEL 695

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELK--KTNP 441
           D  I+S  +  L E+    ++    RA   +   V E+  ++     ++ W  +  +   
Sbjct: 696 DRWIISRLNSTLAEVDAAYEDYHPTRAARAIERFVDELSNWYIRRSRRRFWSARTGEQEN 755

Query: 442 DRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +R     Y TV E +   A+++    P  +  ++  L    E +  +S+
Sbjct: 756 ERDKQAAYQTVYECLETTALMMAPIAPFFSEWLYRALQEGSEVKGPESV 804



 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 19/147 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFVD- 74
           N +P I H     I D+  R+  + G  V    G D HG  +  +  +  G+  +  V+ 
Sbjct: 52  NGKPGIHHVLARTIKDIFCRYKTMKGFRVERKAGWDTHGLPVEIEVEKELGLEGRAQVEA 111

Query: 75  -----------QNSRNFRDMADVLD------ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                      ++   ++++ D L       +  +    T E  + +T   L K+I +KG
Sbjct: 112 FGIEKYNAACRRSVLRYKELWDQLTERIGYWVDLEHPYITFENTYIETVWWLIKQIYEKG 171

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +YKG    WYS       +  EV  G
Sbjct: 172 LLYKGYKIQWYSPGSGTVLSSHEVSLG 198


>gi|218699014|ref|YP_002406643.1| leucyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226695255|sp|B7NM01|SYL_ECO7I RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218369000|emb|CAR16754.1| leucyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|194747537|ref|XP_001956208.1| GF25092 [Drosophila ananassae]
 gi|190623490|gb|EDV39014.1| GF25092 [Drosophila ananassae]
          Length = 869

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 74/190 (38%), Gaps = 25/190 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA 
Sbjct: 61  KNKYYVLSMFPYPSGNLHMGHVRVYTIADAVARFQRMCGKNVFQPMGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    + +QN    R     L  S+D    + T   +++   + L+  +   G  Y+
Sbjct: 121 QRGVEPASWTEQNIDQMRKQLKRLGCSFDWNHELSTCSPQYYRWTQHLFLMLHRHGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W             +F R SA
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLRQWFIRTSA 227

Query: 172 YQDKLLSYYE 181
           Y  +LL   E
Sbjct: 228 YAKQLLDGLE 237


>gi|189083235|sp|Q57RS7|SYL_SALCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|16128625|ref|NP_415175.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89107511|ref|AP_001291.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170080221|ref|YP_001729541.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170080322|ref|YP_001729642.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238899919|ref|YP_002925715.1| leucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|256023746|ref|ZP_05437611.1| leucyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|307137259|ref|ZP_07496615.1| leucyl-tRNA synthetase [Escherichia coli H736]
 gi|2507435|sp|P07813|SYL_ECOLI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|259511542|sp|C4ZWC9|SYL_ECOBW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1651269|dbj|BAA35289.1| leucyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1786861|gb|AAC73743.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|169888056|gb|ACB01763.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|169888157|gb|ACB01864.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238861643|gb|ACR63641.1| leucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450191|gb|ACX40613.1| leucyl-tRNA synthetase [Escherichia coli DH1]
 gi|309700880|emb|CBJ00177.1| leucyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|315135308|dbj|BAJ42467.1| leucyl-tRNA synthetase [Escherichia coli DH1]
 gi|315616439|gb|EFU97056.1| leucyl-tRNA synthetase [Escherichia coli 3431]
 gi|323943057|gb|EGB39216.1| leucyl-tRNA synthetase [Escherichia coli E482]
 gi|323972097|gb|EGB67311.1| leucyl-tRNA synthetase [Escherichia coli TA007]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|15800356|ref|NP_286368.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829934|ref|NP_308707.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168758287|ref|ZP_02783294.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168764679|ref|ZP_02789686.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168767090|ref|ZP_02792097.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168777615|ref|ZP_02802622.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168779135|ref|ZP_02804142.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168786493|ref|ZP_02811500.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168802446|ref|ZP_02827453.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939382|ref|ZP_03084764.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208806935|ref|ZP_03249272.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208815085|ref|ZP_03256264.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822819|ref|ZP_03263137.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209396207|ref|YP_002269278.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217325755|ref|ZP_03441839.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791808|ref|YP_003076645.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261224109|ref|ZP_05938390.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257803|ref|ZP_05950336.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281593|ref|YP_003498411.1| Leucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|29336550|sp|Q8XBN8|SYL_ECO57 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238064866|sp|B5YQJ4|SYL_ECO5E RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12513546|gb|AAG54976.1|AE005243_5 leucine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360138|dbj|BAB34103.1| leucine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767190|gb|EDU31034.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|189002708|gb|EDU71694.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189354850|gb|EDU73269.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189363365|gb|EDU81784.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189365376|gb|EDU83792.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189373577|gb|EDU91993.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375579|gb|EDU93995.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208726736|gb|EDZ76337.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731733|gb|EDZ80421.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208737012|gb|EDZ84696.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209157607|gb|ACI35040.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209777048|gb|ACI86836.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777050|gb|ACI86837.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777052|gb|ACI86838.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777054|gb|ACI86839.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777056|gb|ACI86840.1| leucine tRNA synthetase [Escherichia coli]
 gi|217321976|gb|EEC30400.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591208|gb|ACT70569.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761466|gb|ADD55427.1| Leucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320193049|gb|EFW67689.1| Leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638091|gb|EFX07855.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320643497|gb|EFX12667.1| leucyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320648832|gb|EFX17459.1| leucyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654418|gb|EFX22465.1| leucyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660099|gb|EFX27629.1| leucyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|326341393|gb|EGD65185.1| Leucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345827|gb|EGD69566.1| Leucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|322388643|ref|ZP_08062243.1| leucine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140563|gb|EFX36068.1| leucine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 833

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|295109883|emb|CBL23836.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Ruminococcus obeum A2-162]
          Length = 800

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       +V++R  R++G +VLF  G D  G      
Sbjct: 29  DKPKFYGLVEFPYPSGAGMHVGHIKAYSSLEVISRKRRMEGYNVLFPIGFDAFGLPTENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  D+N + F +    +  S+D    I TT++ ++   + ++ K+ +KG +
Sbjct: 89  AVKTGTHPRIITDENIKKFSNQLKKVGFSFDWNRVIDTTDEDYYKWTQWIFLKMFEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           ++      Y    +   ++++    + G   +  H+ V    ++ ++ R++ Y DKLL
Sbjct: 149 FRDRTLVNYCPHCKVVLSNED----SQGGKCDICHSEVVQKSKDVWYLRITQYADKLL 202



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 27/185 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK- 299
           D  K K+W P D +  G + +  H IY   W  FL      N P P  K    G IL   
Sbjct: 517 DMDKLKYWMPVDWYNGGMEHVTRHMIYSRFWHHFLYDLGVVNTPEPYAKRSIQGLILGPD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP++++EE G D LR +++         F    G     +     G  
Sbjct: 577 GDKMSKSKGNVVDPLDIVEEYGADTLRTYVL---------FMGDYGAATPWSDSSVKGCK 627

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R     L D     P       SDE  + +  R ++++  ++++   + A+A +++
Sbjct: 628 KFLDRVAG--LTDILSEEPV------SDELEMKI-HRTIKKVSSDIESLKFNTAIASLMT 678

Query: 420 LVSEV 424
           L++E+
Sbjct: 679 LINEI 683


>gi|220935447|ref|YP_002514346.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782842|sp|B8GV13|SYL_THISH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219996757|gb|ACL73359.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 817

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 9/193 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA  
Sbjct: 33  EPFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGRNVLQPMGWDAFGLPAENAAIK 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +  +N    R     L   Y  D  + T    ++   + L+ ++  KG  YK 
Sbjct: 93  HLVPPAKWTYENIAYMRGQLQRLGFGYDWDRELATCRPEYYRWEQWLFTRLVKKGLAYKK 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS---Y 179
                +   D+    +++V    DG+ + +   PV+  E   +F R++ Y ++LL     
Sbjct: 153 TAMVNWDPVDQTVLANEQVI---DGKGWRS-GAPVERREIPQWFLRITDYAEELLKGLDG 208

Query: 180 YESHPEFILPIER 192
            E  PE +  ++R
Sbjct: 209 LEGWPEQVRTMQR 221



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 50/246 (20%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A+ W P D ++ G +    H +Y   F        L+  + P   ++ + G +L  G K
Sbjct: 518 RARHWLPVDQYIGGIEHAVLHLLYARFFHKLMRDEGLVDGDEPF-TRLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV----REIA-----CGKDGFYD-KDGLKKRVNA 352
           +SKS GN +DP  +IE  G D +R F++     E++      G +G Y     L K+V+ 
Sbjct: 577 MSKSKGNTVDPEALIERYGADTVRLFMMFAAPPELSLEWSDSGVEGAYRFLKRLWKQVHD 636

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIH 411
            +  G    + ++                A     +++     + L ++ +++ +    +
Sbjct: 637 HVQGGAAPALDKA----------------ALNADQQALRRKLHQTLAKVSDDIGRRTTFN 680

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A  + L++E+ R+ D        K+   RA     V  E +    ++L   VP +A+
Sbjct: 681 TAIAACMELMNELGRFED--------KSGQGRA-----VMQEALETTVLMLSPIVPHIAH 727

Query: 472 KIFDIL 477
            ++  L
Sbjct: 728 ALWSEL 733


>gi|110640871|ref|YP_668599.1| leucyl-tRNA synthetase [Escherichia coli 536]
 gi|123049389|sp|Q0TK31|SYL_ECOL5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110342463|gb|ABG68700.1| leucyl-tRNA synthetase [Escherichia coli 536]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|62185247|ref|YP_220032.1| isoleucyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312597|sp|Q5L5L0|SYI_CHLAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|62148314|emb|CAH64081.1| isoleucyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 1043

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 22/263 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   +++ F PAD    G D  R    ++   ++SA L
Sbjct: 514 YVFDCWFDSGAMPYAQNHYPFENQKETESGF-PADFIAEGLDQTR--GWFYTLTVISAAL 570

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P+ K    +G +L + G K+SK L N   P+ ++   G DALR +L+  +    +  
Sbjct: 571 FDQPVFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADALRLYLLDSVVVKAEDL 630

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L N + +       +   D +       +++E D  ILS    
Sbjct: 631 RFSDKGVESVLKQVLLPLTN-VLSFFKTYTDLYGFDANNYDKEEISYSEIDRWILSNLYT 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           V+ ++RE+M +  ++ A+   ++ + ++  ++     ++ WE   T PDR  A   LY  
Sbjct: 690 VVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT-PDRRAAFATLY-- 746

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+     ++  F+P ++  I+
Sbjct: 747 -EVLTVFCRVIAPFIPFISEDIY 768


>gi|332096809|gb|EGJ01799.1| leucyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|325498179|gb|EGC96038.1| leucyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 868

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 212


>gi|323163903|gb|EFZ49712.1| leucyl-tRNA synthetase domain protein [Shigella sonnei 53G]
          Length = 390

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQV---IDGCCWRCD-TKVERKEIPQWFIKITAYADELLN 212


>gi|319783175|ref|YP_004142651.1| valyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169063|gb|ADV12601.1| valyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 927

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 39/291 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     K  ++  D+ V G DI+     +W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDETPELKT-YYQTDVLVTGFDII----FFWVARMMMMGLHF 549

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +     V+ H  +  K G K+SKS GNVIDP+++I+E G DALR+ L    A G+D  
Sbjct: 550 MDEEPFHTVYVHALVRDKNGAKMSKSKGNVIDPLDLIDEYGADALRFTLTVMAAQGRDVK 609

Query: 341 YDKDGLK--KRVNADLANGIG----NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            D   +   +     L N       N V+R+    L D         A    +  IL+  
Sbjct: 610 LDPARIAGYRNFGTKLWNATRFAEMNEVARNDDFWLND---------AKLAVNRWILTEL 660

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +R  +EI + + +   + A       V  +  D Y +  KP  +      +A +   V  
Sbjct: 661 TRAAREITDGITSYRFNEAAGAAYRFVWNLFCDWYLELLKPVFMGTDEAAKAESRACVAF 720

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
            V+ ++  LL   +P          F+ +E     + + + +P  + H T+
Sbjct: 721 -VLDEIYKLLHPMMP----------FMTEELWAQTAGEGKQRPSLLCHATW 760


>gi|295398837|ref|ZP_06808831.1| leucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294972927|gb|EFG48760.1| leucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 841

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 31/182 (17%)

Query: 259 DLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG-EKISKSLGNV 310
           DL++ G +    H +Y   W  FL    +  N    +K+++ G IL +G EK+SKS GNV
Sbjct: 562 DLYIGGAEHAVLHLLYARFWNMFLYDLGVVPNEEPFQKLYNQGMILGEGNEKMSKSKGNV 621

Query: 311 IDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           ++P +V+ + G D LR +      L   IA  ++G        +RV   L +  G +  R
Sbjct: 622 VNPDDVVNQYGADTLRLYEMFMGPLDASIAWSENGLEGSRRFLERVWRLLVDENGKMRDR 681

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +M   + D                  V  + +Q++ E+  N   + A++Q++  V+E 
Sbjct: 682 ITTMNTGELD-----------------KVYHQTVQKVTEDFDNLHFNTAISQMMVFVNEA 724

Query: 425 DR 426
           ++
Sbjct: 725 NK 726



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 18/217 (8%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R+ R  G +VL   G D  G    + A
Sbjct: 67  KPKYYALDMFPYPSGAGLHVGHPEGYTATDIMSRYKRAQGYNVLHPMGWDAFGLPAEQYA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   F+     L  SY  D  I TT+ + +   + ++ K+ +KG  Y
Sbjct: 127 LDTGNDPVDFTAKNIATFKRQIKSLGFSYDWDREINTTDPKFYKWTQWIFTKLYEKGLAY 186

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
           +      W         N++ +   ++   Y     P+ QW+       R++AY D+LL 
Sbjct: 187 EDEILVNWCEALGTVLANEEVIDGKSERGGYPVVRKPMKQWV------LRITAYADRLLE 240

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             E+       ++  N V+   +  +     ++ TFD
Sbjct: 241 GLEN-------VDWPNSVVEMQRHWIGKSEGAQLTFD 270


>gi|291278922|ref|YP_003495757.1| valyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753624|dbj|BAI80001.1| valyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 872

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 18/136 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K   KF+P    V G DIL F    W A ++   L
Sbjct: 449 VLDTWFSSALWPFSTMGW---PEKTKTLEKFYPTSCLVTGFDILFF----WVARMIMMGL 501

Query: 285 PLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                V F H +I        G+K+SKS GNVIDP+ +IE+ G DA R+ L    A G+D
Sbjct: 502 KFMNDVPFYHVYIHALVRDQYGQKMSKSKGNVIDPLIMIEKYGADAFRFTLAAFAAQGRD 561

Query: 339 GFYDKD---GLKKRVN 351
               +D   G K  VN
Sbjct: 562 IKLSEDRIVGYKNFVN 577



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          S  I  PN     H+GHA    + D+L R+HR+ G +VL+  GTD  G
Sbjct: 40 SIVIPPPNVTGSLHMGHALNNTLQDILIRYHRMKGFEVLWLPGTDHAG 87


>gi|290559236|gb|EFD92582.1| tRNA synthetase valyl/leucyl anticodon-binding [Candidatus
           Parvarchaeum acidophilus ARMAN-5]
          Length = 495

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 17/176 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
            W+D+  + L  T YL + +   +K +P  L   G DI+R    Y     + L+  LP  
Sbjct: 180 TWMDSSVSALYVTKYLYDKEFF-SKTYPMTLRPQGIDIVRTWLNYSILRNYQLTEKLPW- 237

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K  +  G  L + GEK+SKS GN +DP  VIE+ G DA R++ V E   G +  + +  L
Sbjct: 238 KTAWIDGMGLDEHGEKMSKSKGNGVDPTIVIEKYGADAFRFWAVSEAMPGSNFMFSESRL 297

Query: 347 KKRVNADLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +         G    +++  +V+ ++K +      P   TESD  I+    ++  E
Sbjct: 298 Q---------GSSKFLTKLWNVARLIKQFPAQEDRP-TITESDRWIIEYTKKITNE 343


>gi|290510399|ref|ZP_06549769.1| leucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289777115|gb|EFD85113.1| leucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNITYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|289625790|ref|ZP_06458744.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867186|gb|EGH01895.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330871074|gb|EGH05783.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 868

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|227892921|ref|ZP_04010726.1| leucine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865259|gb|EEJ72680.1| leucine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 804

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 19/230 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V   QN  NF++  + L  SY  D  + T++ +++   + +++++   G  
Sbjct: 88  ALKTGEDPAVVTKQNIANFKEQLNKLGFSYDWDREVTTSDPKYYKWTQWVFEQMYKNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY D+LL
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRKNMRQWM------LKMTAYADRLL 201

Query: 178 SYYES--HPEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              +    PE +  ++R      V + V   +KD   S KTFD     PD
Sbjct: 202 EDLDGLDWPEPVKEMQRNWIGRSVGAQVTFKIKD---SDKTFDIFTTRPD 248



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +VI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  V+   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFVNAAQK 689


>gi|188492093|ref|ZP_02999363.1| leucyl-tRNA synthetase [Escherichia coli 53638]
 gi|188487292|gb|EDU62395.1| leucyl-tRNA synthetase [Escherichia coli 53638]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|161615134|ref|YP_001589099.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|168236642|ref|ZP_02661700.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168264419|ref|ZP_02686392.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168465825|ref|ZP_02699707.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194735156|ref|YP_002113766.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|189083146|sp|A9MUK3|SYL_SALPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693644|sp|B4TPX5|SYL_SALSV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161364498|gb|ABX68266.1| hypothetical protein SPAB_02902 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194710658|gb|ACF89879.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631913|gb|EDX50433.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197290284|gb|EDY29640.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205347105|gb|EDZ33736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|193063336|ref|ZP_03044426.1| leucyl-tRNA synthetase [Escherichia coli E22]
 gi|193069044|ref|ZP_03050002.1| leucyl-tRNA synthetase [Escherichia coli E110019]
 gi|194429744|ref|ZP_03062260.1| leucyl-tRNA synthetase [Escherichia coli B171]
 gi|218549783|ref|YP_002383574.1| leucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218553184|ref|YP_002386097.1| leucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218694082|ref|YP_002401749.1| leucyl-tRNA synthetase [Escherichia coli 55989]
 gi|256020594|ref|ZP_05434459.1| leucyl-tRNA synthetase [Shigella sp. D9]
 gi|260842868|ref|YP_003220646.1| leucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260853894|ref|YP_003227785.1| leucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260866790|ref|YP_003233192.1| leucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|307312642|ref|ZP_07592274.1| leucyl-tRNA synthetase [Escherichia coli W]
 gi|226695256|sp|B7M5G9|SYL_ECO8A RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695262|sp|B7LLH1|SYL_ESCF3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782498|sp|B7L9I6|SYL_ECO55 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|192930920|gb|EDV83524.1| leucyl-tRNA synthetase [Escherichia coli E22]
 gi|192957588|gb|EDV88033.1| leucyl-tRNA synthetase [Escherichia coli E110019]
 gi|194412225|gb|EDX28531.1| leucyl-tRNA synthetase [Escherichia coli B171]
 gi|218350814|emb|CAU96506.1| leucyl-tRNA synthetase [Escherichia coli 55989]
 gi|218357324|emb|CAQ89961.1| leucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218359952|emb|CAQ97496.1| leucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|257752543|dbj|BAI24045.1| leucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257758015|dbj|BAI29512.1| leucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257763146|dbj|BAI34641.1| leucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|284920442|emb|CBG33503.1| leucyl-tRNA synthetase [Escherichia coli 042]
 gi|306907344|gb|EFN37849.1| leucyl-tRNA synthetase [Escherichia coli W]
 gi|315059897|gb|ADT74224.1| leucyl-tRNA synthetase [Escherichia coli W]
 gi|323153635|gb|EFZ39883.1| leucyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323179881|gb|EFZ65438.1| leucyl-tRNA synthetase [Escherichia coli 1180]
 gi|323185003|gb|EFZ70370.1| leucyl-tRNA synthetase [Escherichia coli 1357]
 gi|323379539|gb|ADX51807.1| leucyl-tRNA synthetase [Escherichia coli KO11]
 gi|323945117|gb|EGB41179.1| leucyl-tRNA synthetase [Escherichia coli H120]
 gi|323976375|gb|EGB71465.1| leucyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324116716|gb|EGC10631.1| leucyl-tRNA synthetase [Escherichia coli E1167]
          Length = 860

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|323967589|gb|EGB63005.1| leucyl-tRNA synthetase [Escherichia coli M863]
 gi|327254326|gb|EGE65948.1| leucyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|320664896|gb|EFX32031.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|293408768|ref|ZP_06652607.1| leucyl-tRNA synthetase [Escherichia coli B354]
 gi|291471946|gb|EFF14429.1| leucyl-tRNA synthetase [Escherichia coli B354]
          Length = 891

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|257790203|ref|YP_003180809.1| leucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257474100|gb|ACV54420.1| leucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 859

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 35/249 (14%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK-GE 301
           KA  W P D ++ G +    H +Y   +        LL  + P    +   G +  + GE
Sbjct: 548 KANRWMPVDQYIGGIEHAILHLLYSRFYTKVLRDLGLLEFDEPF-SNLLCQGMVKDEHGE 606

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            +SKS GNVI P ++I E G DA+R +++      KD  +D+ GL          GI   
Sbjct: 607 TMSKSKGNVIAPEDMIAEYGADAVRAYILFMAPPDKDLLWDEGGLA---------GIYKF 657

Query: 362 VSRSVSMILKDYDG-----MIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHR 412
           ++R+   I+ D  G      +  PGA  +      E ++    RV+ ++ ++      + 
Sbjct: 658 MNRAWR-IVNDLMGAADEETLYQPGASEDEGIKALEQLVRERHRVVGKVVDDFDRNNFNT 716

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           ALA ++ L +    Y     P E       RA     V  EV   L  LL  F P  A +
Sbjct: 717 ALAAIMELTNAASDYLRKCSPEERAGCEGSRA-----VDAEVAEVLVKLLAPFAPHWAEE 771

Query: 473 IFDILFVAD 481
           ++  +   D
Sbjct: 772 LWHAVLGKD 780



 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GH     I DV+AR++++ G DVL   G D  G     AA 
Sbjct: 33  KSKKYVLEMFPYPSGDIHMGHVRNYTIGDVVARYYKMRGFDVLHPMGWDAFGLPAENAAI 92

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    T   +D    +F+ M      SYD
Sbjct: 93  KCNSHPAKWTYANIDTQKASFKRMG----FSYD 121


>gi|224538678|ref|ZP_03679217.1| hypothetical protein BACCELL_03572 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519722|gb|EEF88827.1| hypothetical protein BACCELL_03572 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 32/265 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEIDYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D D L ++   +  N
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKFGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFCN 586

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         + D     P P A   +     S  + V  E+ +      +  AL  
Sbjct: 587 KIWNAYRLVSGWTIDDNQ---PIPEAAKLAISWFESKQNEVTAEVADLFSKYRLSEALMA 643

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P       STV    +     L  LL  F+P +  +
Sbjct: 644 VYKL------FWDEFSSWFLEIIKPAYGQGIHSTVRNAAICYFDNLLRLLHPFMPFITEE 697

Query: 473 IFDILFVADENR----CFQSLDQRL 493
           ++  ++  +E      C  S+D  +
Sbjct: 698 LWQQMYEREEGESIMVCPLSMDTHV 722


>gi|218557580|ref|YP_002390493.1| leucyl-tRNA synthetase [Escherichia coli S88]
 gi|189083239|sp|Q1RER9|SYL_ECOUT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083240|sp|A1A8R7|SYL_ECOK1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695254|sp|B7MFR5|SYL_ECO45 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218364349|emb|CAR02024.1| leucyl-tRNA synthetase [Escherichia coli S88]
 gi|294492674|gb|ADE91430.1| leucyl-tRNA synthetase [Escherichia coli IHE3034]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|153810768|ref|ZP_01963436.1| hypothetical protein RUMOBE_01152 [Ruminococcus obeum ATCC 29174]
 gi|149833164|gb|EDM88246.1| hypothetical protein RUMOBE_01152 [Ruminococcus obeum ATCC 29174]
          Length = 800

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       +V++R  R++G +VLF  G D  G      
Sbjct: 29  DKPKFYGLVEFPYPSGAGMHVGHIKAYSSLEVISRKRRMEGYNVLFPIGFDAFGLPTENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  D+N + F +    +  S+D    I TT++ ++   + ++ K+ +KG +
Sbjct: 89  AVKTGTHPRIITDENIKKFSNQLKKVGFSFDWNRVIDTTDEDYYKWTQWIFLKMFEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           ++      Y    +   ++++    + G   +  H+ V    ++ ++ R++ Y DKLL
Sbjct: 149 FRDRTLVNYCPHCKVVLSNED----SQGGKCDICHSEVVQKSKDVWYLRITQYADKLL 202



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 47/238 (19%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK- 299
           D  K K+W P D +  G + +  H IY   W  FL      N P P  K    G IL   
Sbjct: 517 DMDKLKYWMPVDWYNGGMEHVTRHMIYSRFWHHFLYDLGVVNTPEPYAKRSIQGLILGPD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP++++EE G D LR +++         F    G     +     G  
Sbjct: 577 GDKMSKSKGNVVDPLDIVEEYGADTLRTYVL---------FMGDYGAATPWSDSSVKGCK 627

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +     D +   P       E +     R ++++  +++N   + A+A +++
Sbjct: 628 KFLDRVAGLT----DILSEEP-----VSEELEMKIHRTIKKVSSDIENLKFNTAIASLMT 678

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L++E+                    +   ++  E +     LL  F P L  +I++ L
Sbjct: 679 LINEI--------------------TAEGHIGKEDLSIFIKLLSPFAPHLCEEIWEFL 716


>gi|56964635|ref|YP_176366.1| leucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|60390667|sp|Q5WE05|SYL_BACSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56910878|dbj|BAD65405.1| leucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 804

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 20/212 (9%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+  T      D  K K W P D ++ G +    H +Y   W  FL
Sbjct: 489 PQWAGSCWY--YLRYIDPTNDEALADPEKLKNWLPVDTYIGGAEHAVLHLLYARFWHKFL 546

Query: 280 LSANLPLPK----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               +   K    KVF+ G IL    EK+SKS GNV++P E+I   G D LR + +    
Sbjct: 547 YDIGVVPTKEPFQKVFNQGMILGENNEKMSKSKGNVVNPDEIIASHGADTLRLYEMFMGP 606

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL         +G    + R   +I+ +  G + +     E +E+ +   
Sbjct: 607 LDASVAWSTNGL---------DGSRRFLERVWRLIVNEETGKLNSNVKDVEGNEAFVRTY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++++ E+      +  ++Q++  V+E ++
Sbjct: 658 HQTVKKVTEDFAELRFNTGISQLMVFVNEGNK 689



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E    Y      YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  EGPHFYALDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN   F+     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGKHPATFTKQNIDTFKRQIKELGFSYDWDREISTTDPHYYKWTQWIFLKLYEKGLA 148

Query: 120 Y 120
           Y
Sbjct: 149 Y 149


>gi|157160137|ref|YP_001457455.1| leucyl-tRNA synthetase [Escherichia coli HS]
 gi|312970723|ref|ZP_07784904.1| leucyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|166980076|sp|A7ZXR8|SYL_ECOHS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157065817|gb|ABV05072.1| leucyl-tRNA synthetase [Escherichia coli HS]
 gi|310337372|gb|EFQ02510.1| leucyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|320322691|gb|EFW78784.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|320529478|ref|ZP_08030564.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138272|gb|EFW30168.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 849

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 8/184 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 57  KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMAGYNVLHPMGFDSFGMPAENAAI 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N +     + +SY  D  + T  + ++   + +++    KG  YK
Sbjct: 117 KNNVHPAAWTYANIENMKRQQRAMGLSYDWDREVVTCREDYYRWTQWIFELFYKKGLAYK 176

Query: 122 GCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              S  W         N+    +  DG+ +  + + VQ      +FF+++ Y D+LL+  
Sbjct: 177 KEASVNWCDTCGTVLANE----QVEDGKCWRCK-SEVQKRNLAQWFFKITDYADELLADL 231

Query: 181 ESHP 184
           +  P
Sbjct: 232 DKLP 235



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 41/249 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D     +W P D ++ G +    H +Y   F        +L  + P    + + G ++  
Sbjct: 547 DRDAVNYWAPVDQYIGGIEHAILHLLYARFFTKVLRDAEMLDFDEPF-TNLLTQGMVIKD 605

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+ P E+I+  G D  R F++      +D  +   G++         G  
Sbjct: 606 GAKMSKSLGNVVSPEEIIDRYGADTARLFILFAAPVERDLDWSDQGVE---------GAF 656

Query: 360 NLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQ-LIHR 412
             +SR V  IL  ++  I +        A +  +  +  V    ++++ E+++++ + + 
Sbjct: 657 RFLSR-VWRILGQFEETIRSASDAYDTDALSTEETELRRVLHSTVKKVTEDIRDRFMFNT 715

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A++ V+ LV+    + D       +  +P  A        E    L  +L  F P +  +
Sbjct: 716 AISSVMELVNAFYAFQD-------RALHPGLAR-------EAASALVRMLAPFAPHITAE 761

Query: 473 IFDILFVAD 481
           ++  LF+ +
Sbjct: 762 LWSRLFIGN 770


>gi|319941944|ref|ZP_08016265.1| isoleucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804597|gb|EFW01467.1| isoleucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 956

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 12/109 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+ T + T         GS      WPADL++ G D  R  FH+      +L  
Sbjct: 559 ILDVWFDSGTTHYTVM------RGSHKDILGWPADLYLEGSDQHRGWFHSSLLTGTMLDG 612

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P   ++ +HGF +  KGEK+SKS GNV+ P E+ ++ G + LR ++ 
Sbjct: 613 RPPY-NQLLTHGFCVDEKGEKMSKSKGNVVRPQEINDKYGAEILRLWVA 660


>gi|319789620|ref|YP_004151253.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114122|gb|ADU96612.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 936

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  F A    +       P  + V +HGF L  KG K+SKSLGNV+ 
Sbjct: 554 WPADLYLEGSDQHRGWFQASLLESCGTRGKAPY-RAVLTHGFTLDEKGLKMSKSLGNVVS 612

Query: 313 PIEVIEEVGVDALRYFLVRE 332
           P +V++  G D LR ++  E
Sbjct: 613 PTDVVKRYGADILRLWVASE 632



 Score = 40.4 bits (93), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 26/57 (45%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           EK  +     Y N   HIGHA   I+ D++ +   L G    F  G D HG  I +A
Sbjct: 51  EKFVLHDGPPYANGHIHIGHALNKILKDIVNKSKALQGYQTPFVPGWDCHGLPIERA 107


>gi|293418753|ref|ZP_06661188.1| leucyl-tRNA synthetase [Escherichia coli B088]
 gi|291325281|gb|EFE64696.1| leucyl-tRNA synthetase [Escherichia coli B088]
          Length = 891

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|289648425|ref|ZP_06479768.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|240146704|ref|ZP_04745305.1| leucine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201135|gb|EEU99419.1| leucine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291536292|emb|CBL09404.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Roseburia intestinalis M50/1]
 gi|291538835|emb|CBL11946.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Roseburia intestinalis XB6B4]
          Length = 805

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 26/179 (14%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFIL-HKGEKIS 304
           K+W P D +  G +    H +Y   W  FL    + P P   +K  SHG IL   GEK+S
Sbjct: 529 KYWMPVDWYNGGMEHTTLHLLYSRFWHKFLYDEKVVPCPEPYQKRTSHGMILGENGEKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +++ E G D LR + +   A      + +DG+K                R
Sbjct: 589 KSRGNVVNPDDIVREYGADTLRTYEMFIGAFDLSASWSEDGVKG-------------CRR 635

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            +  + K  D M    G   E +  +     + ++++  + +N   + A+A +++L++E
Sbjct: 636 FLERVWKLQDIMTEETGYSKELETKM----HQTIKKVSSDYENLKYNTAIAAMMALINE 690



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      A
Sbjct: 32  KPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENYA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K+  + N + F++    L  S+  D  I TT+  ++   + ++ K+   G  Y
Sbjct: 92  IKNKIHPKIVTENNVKRFKEQLHSLGYSFDWDREINTTDPSYYKWTQWIFLKLFKAGLAY 151

Query: 121 K 121
           K
Sbjct: 152 K 152


>gi|150025746|ref|YP_001296572.1| valyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772287|emb|CAL43765.1| Valine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 875

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 28/260 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP- 287
            W  +    +   G + NP+    K++ P +  V G DIL F    W A ++ A      
Sbjct: 458 TWFSSWLWPMAVFGGITNPENEDFKYYYPTNDLVTGPDILFF----WVARMIIAGYEYTG 513

Query: 288 KKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           KK FS+ ++       +  K+SKSLGN  +P+ +IE+ G D +R  L+   + G D  +D
Sbjct: 514 KKPFSNVYLTGLVRDSQRRKMSKSLGNSPEPLGLIEKFGADGVRVGLLLSASAGNDIMFD 573

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           ++   +        G  N +  +  +I   +    I  P +   + E   +   + L  I
Sbjct: 574 EELCNQ------GKGFTNKIWNAFKLIKGWEVSETIAQPESSKVAIEWYEAKLQQTLLAI 627

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVIRQ 457
            ++ +   I  AL  +  LV      +D    W L+   P     +  VT    +E++  
Sbjct: 628 EDDFEKYRISDALMAIYKLV------WDDFCSWFLEMIKPAYQQPIDSVTFAKAIEMLEN 681

Query: 458 LAILLQAFVPKLANKIFDIL 477
              LL  F+P L  +I+ I+
Sbjct: 682 NLKLLHPFMPFLTEEIWQII 701


>gi|149198549|ref|ZP_01875593.1| leucyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138264|gb|EDM26673.1| leucyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 873

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 12/195 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+    H+GH      +D++ R+ R  G +VL   G D  G    + A
Sbjct: 35  KPKFYALDMFPYPSGSGLHVGHPEGYTASDIICRYKRQKGFNVLHPMGWDAFGLPAEQYA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV   +  ++N  NFR     L  SY  D  I TT+++++   + ++ ++  KG   
Sbjct: 95  MKTGVHPSITTEKNVDNFRRQIQELGFSYDWDREINTTDEKYYKWTQWIFLQLYKKGLAK 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSY 179
                  +         ++EV  G D +    +  P+ QW+      F+++ Y ++LL  
Sbjct: 155 IDNVDVNWCPTTRTVLANEEVNNGMDEKGNAVERKPMKQWV------FKITEYAEQLLEG 208

Query: 180 YE--SHPEFILPIER 192
            +    PE I  ++R
Sbjct: 209 LDDLDWPEGIKEMQR 223



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 39/181 (21%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV++P ++++E G D+LR + +   A      +    +         NGI   
Sbjct: 643 KMSKSLSNVVNPDDIVKEFGADSLRLYEMFMGALADSKLWITSSI---------NGINKF 693

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-----VLQEIRENMQNQLIHRALAQ 416
           ++R   +++ D +G + +    + SD++ LS  SR      ++++ E++++   + A++Q
Sbjct: 694 LTRCHKLVV-DKNGELNS----SISDDAELSEDSRRTLHATIKKVGEDIESFGFNTAISQ 748

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++  ++E  +           K  P  A          I     +L  F P LA ++++ 
Sbjct: 749 MMIFINEFSKL----------KAIPKSA----------IEDFVTILSPFAPHLAEELWEK 788

Query: 477 L 477
           L
Sbjct: 789 L 789


>gi|82543087|ref|YP_407034.1| leucyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123560325|sp|Q324Q2|SYL_SHIBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81244498|gb|ABB65206.1| leucine tRNA synthetase [Shigella boydii Sb227]
 gi|320185381|gb|EFW60151.1| Leucyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332097706|gb|EGJ02680.1| leucyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|298488998|ref|ZP_07007021.1| Leucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156496|gb|EFH97593.1| Leucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|215485682|ref|YP_002328113.1| leucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312965088|ref|ZP_07779325.1| leucyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|254782497|sp|B7UKT2|SYL_ECO27 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|215263754|emb|CAS08090.1| leucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312290179|gb|EFR18062.1| leucyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|323191281|gb|EFZ76545.1| leucyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|71736375|ref|YP_276510.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123733881|sp|Q48DN1|SYL_PSE14 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71556928|gb|AAZ36139.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|116754118|ref|YP_843236.1| valyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121692889|sp|A0B7C2|SYV_METTP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|116665569|gb|ABK14596.1| valyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 855

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 32/262 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W+D+  + L  TG+L   D      +PA L   G DI+R  A Y    L S  L  
Sbjct: 449 VLDTWMDSSISALHVTGWLSREDPR----YPAQLRPQGHDIIRTWAFY--TILRSMALVG 502

Query: 287 PK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K    +  +G +L + G K+SKSL N + P EV E+ G DALR +     + G D  + 
Sbjct: 503 VKPWETILINGMVLGEDGRKMSKSLNNFVIPEEVFEKNGADALRQWAALGGSPGSDVMFQ 562

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
               K+ V A         + R  +    D D        FT+ D  +L     ++ ++ 
Sbjct: 563 ---WKEIVAASRFQQKLWSIYRFAAPFASDTD------APFTQIDRWLLGELGMLVSKVT 613

Query: 403 ENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDR-----ASTVLYVTVEVI 455
           + M+      A   + +   EV  D Y +  K    +   PD      A   LY  ++V 
Sbjct: 614 DAMEAFQFDEAFRAIRAFTWEVLADDYIEIVKS---RLYGPDSDERRAAQATLYRVLDV- 669

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  L+  F+P +  +I+  L
Sbjct: 670 --LCRLMAPFIPFITEEIYTSL 689



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG       
Sbjct: 33  EKPQYIIDTPPPYPTGNFHIGNALNWCYIDFVARYKRMRGYNVMFPQGWDCHGLPTEVKV 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +     TK  V +    FR + + +     + +R T  R
Sbjct: 93  EETYHITKNQVPRE--EFRRLCEEMTAQAIERMRRTITR 129


>gi|331651654|ref|ZP_08352673.1| leucine--tRNA ligase [Escherichia coli M718]
 gi|331049932|gb|EGI21990.1| leucine--tRNA ligase [Escherichia coli M718]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 212


>gi|281600022|gb|ADA73006.1| Leucyl-tRNA synthetase [Shigella flexneri 2002017]
          Length = 891

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|191168680|ref|ZP_03030460.1| leucyl-tRNA synthetase [Escherichia coli B7A]
 gi|209917902|ref|YP_002291986.1| leucyl-tRNA synthetase [Escherichia coli SE11]
 gi|238064867|sp|B6I153|SYL_ECOSE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190901272|gb|EDV61041.1| leucyl-tRNA synthetase [Escherichia coli B7A]
 gi|209911161|dbj|BAG76235.1| leucyl-tRNA synthase [Escherichia coli SE11]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|324114763|gb|EGC08731.1| leucyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|320178432|gb|EFW53400.1| Leucyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|297180037|gb|ADI16262.1| leucyl-tRNA synthetase [uncultured bacterium HF0010_16H03]
          Length = 756

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH     I DV++R+ R++  +V    G D  G     AA    V+ K + ++N  + +
Sbjct: 1   MGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAAIANKVSPKKWTNENIEHMK 60

Query: 82  DMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
                L + YD    +RT E +++   ++++KK  +KG +YK      +   DE    ++
Sbjct: 61  KQLISLGLGYDWSKELRTCEPKYYKWEQLVFKKFHEKGLVYKKKSIVNWDPVDETVLANE 120

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +V  G  G    A+   V+  E + +F +++ Y ++LLS
Sbjct: 121 QVIDGK-GWRSGAK---VELKEIDQWFIKITDYAEELLS 155



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 86/186 (46%), Gaps = 20/186 (10%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
            K+W P DL++ G +    H +Y   F        ++  N P  KK+ + G +L  G K+
Sbjct: 457 TKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDMDMVDGNEPF-KKLLTQGMVLKDGTKM 515

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP   IE+ G D +R +++      +   + +  ++         G    + 
Sbjct: 516 SKSKGNTVDPQSYIEKYGADTVRLYMMFTAPPEQSLEWSESSVE---------GASRFLK 566

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVS 422
           +  ++++     +I  P  F++ + S+       L+++  + +++   + A+A ++ L++
Sbjct: 567 KVWNLVINKNFTLIEEPYEFSKEEMSLRRKTHMTLKKVTGDFESRFSFNTAIASIMELLN 626

Query: 423 EVDRYF 428
            +   F
Sbjct: 627 AIPEDF 632


>gi|296424632|ref|XP_002841851.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638101|emb|CAZ86042.1| unnamed protein product [Tuber melanosporum]
          Length = 956

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 41/271 (15%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ T++      +   +G       ADL++ G D  R  F +    +   +  L 
Sbjct: 528 MDVWFDSGTSWAILRSRIGQREGKPL----ADLYLEGSDQHRGWFQSSLLTSVATTTGLS 583

Query: 286 LPKKVF----SHGFIL-HKGEKISKSLGNVIDPIEVIEEV-----GVDALRYFLVREIAC 335
             K  F    +HGF L  KG+K+SKSLGN + P++VI+       G+DALR ++    +C
Sbjct: 584 AAKTPFAMVVTHGFCLDEKGKKMSKSLGNTMAPVDVIQPKGKSIGGIDALRLWVA---SC 640

Query: 336 GKDGFYDKDGLKKRVNADLANGIG-NLVSRSVSMI-----LKDYDGMIPTPGAFTESDES 389
                Y KD     + + + +G+  NL    V++      L+D+DG        T++D+ 
Sbjct: 641 D----YTKD---VSIGSTILDGVNENLRKLRVTLRFLLGNLEDWDGKEVDYFDLTKTDKY 693

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR---YFDAQKPWELKKTNP---DR 443
            L+   +V + I E  +N   +R + Q+I   +  D    Y D  K  +   ++P    R
Sbjct: 694 ALAQLYQVNRAIAETYKNMHFNRVI-QIIMSYTNTDLSAFYLDVTK--DSMYSDPKDSQR 750

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              +  V   ++R    +L   VP L  +++
Sbjct: 751 RRGIQTVIYHILRNYLSILTPIVPLLTQEVW 781



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
          Y N   H+GHA   I+ D++ RF  L G  + +  G D HG  I  KA Q+
Sbjct: 44 YANGTLHLGHALNKILKDIVGRFQVLSGRHLSYIPGWDCHGLPIELKALQS 94


>gi|262041266|ref|ZP_06014477.1| leucine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041382|gb|EEW42442.1| leucine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|182678696|ref|YP_001832842.1| valyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634579|gb|ACB95353.1| valyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 912

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D     K +++P ++ V G DI+ F    W A ++   L  
Sbjct: 477 VLDTWFSSALWPFSTLGWPDETAELK-RYYPTNVLVTGFDIIFF----WVARMMMMGLHF 531

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +P + V+ H  +   KG K+SK+ GNVIDP+ ++++ G DALR+ L    A G+D
Sbjct: 532 LGEVPFRDVYIHALVRDEKGAKMSKTKGNVIDPLNLVDQYGADALRFTLASMAAPGRD 589



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D+L RF R+ G DVL+  G D           +AG+ T++ V++
Sbjct: 52 HMGHALNNTLQDILCRFERMRGKDVLWQPGMD-----------HAGIATQMVVER 95


>gi|84029563|sp|Q983N4|SYI_RHILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 993

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + ++ T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 591 ILDVWFDSGSTHVFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 644

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P    V +HGF + + G K+SKSLGN + P +VI++ G D LR ++V         +++ 
Sbjct: 645 PY-DTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVV------TTDYWED 697

Query: 344 DGLKKRV---NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             L K V   N D    + N +   +  +  D    +P   A  E +  +L   + + + 
Sbjct: 698 QRLGKNVLQTNIDAYRKLRNTIRWMLGTLAHDDGETVPLE-AMPELERLMLHRLAELDEV 756

Query: 401 IREN---MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +R+     + + I RAL   + +V     YFD +K   L    P  +S     +V+V+R 
Sbjct: 757 VRQGYDAFEFKRITRALVDFM-VVELSAFYFDIRKD-ALYCDAP--SSVKRKASVQVVRH 812

Query: 458 L-AILLQAFVPKL 469
           L   L++   P L
Sbjct: 813 LFDCLVKWLAPML 825



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  RTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSTYVPGWDCHGLPI 108


>gi|157158979|ref|YP_001461810.1| leucyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980075|sp|A7ZJ31|SYL_ECO24 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157081009|gb|ABV20717.1| leucyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|332094314|gb|EGI99365.1| leucyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|74311178|ref|YP_309597.1| leucyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|123746031|sp|Q3Z4F0|SYL_SHISS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|73854655|gb|AAZ87362.1| leucine tRNA synthetase [Shigella sonnei Ss046]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|28378066|ref|NP_784958.1| leucyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556279|ref|YP_003062696.1| leucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300769231|ref|ZP_07079119.1| leucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180248|ref|YP_003924376.1| leucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|32171523|sp|Q88XA9|SYL_LACPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28270900|emb|CAD63805.1| leucine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045206|gb|ACT61999.1| leucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300493260|gb|EFK28440.1| leucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045739|gb|ADN98282.1| leucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 808

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+ Q  H+GH       D+++RF R+ G +VL   G D  G    + 
Sbjct: 29  DKKKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRFKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K F  +N +NF+     L  SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALKTGHNPKDFTAKNIKNFKRQIRSLGFSYDWDREVNTTDPSYYKWTQWIFEQLYKKGLA 148

Query: 120 YK 121
           Y+
Sbjct: 149 YE 150



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 32/191 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG 300
           D  K K+W P DL+V G +    H +Y   W  FL    +   K+ F    + G IL   
Sbjct: 518 DYDKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGDN 577

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +++++ G D LR +      L   I    DG +  +   +RV   
Sbjct: 578 HEKMSKSRGNVVNPDDIVDQYGADTLRLYEMFMGPLEASIPWSTDGLHGANKWIERV-WR 636

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L     N V   ++ I                +D  +  + +  ++++ E+ +    + A
Sbjct: 637 LMIDENNRVRDRITTI----------------NDGKLTKIYNETVKKVTEDYEAMRFNIA 680

Query: 414 LAQVISLVSEV 424
           ++Q++  V+E 
Sbjct: 681 ISQMMVFVNEA 691


>gi|194439889|ref|ZP_03071952.1| leucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|253774372|ref|YP_003037203.1| leucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160724|ref|YP_003043832.1| leucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300931577|ref|ZP_07146890.1| leucyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|194421183|gb|EDX37207.1| leucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|242376417|emb|CAQ31117.1| leucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325416|gb|ACT30018.1| leucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972625|gb|ACT38296.1| leucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976819|gb|ACT42489.1| leucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300460626|gb|EFK24119.1| leucyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|323963211|gb|EGB58779.1| leucyl-tRNA synthetase [Escherichia coli H489]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|330445214|ref|ZP_08308866.1| leucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489405|dbj|GAA03363.1| leucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 857

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEY 198


>gi|291542661|emb|CBL15771.1| Isoleucyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 921

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFL 279
           D  + IM VW D+ +++       DN +       PADL++ G D  R  F +    +  
Sbjct: 529 DKEKDIMDVWFDSGSSHAAVLEQRDNLES------PADLYLEGNDQYRGWFQSSLLTSVA 582

Query: 280 LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                P  K V +HG IL  +  K+SKSLGN I P +VI++ G D LR + V       D
Sbjct: 583 TRGRAPY-KAVLTHGMILDDESRKMSKSLGNGISPQDVIKQYGADVLRLW-VASTDYQTD 640

Query: 339 GFYDKDGLK------KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD LK      +++       +GN+   +    + D+D ++P        D+  L+
Sbjct: 641 VHISKDILKQISESYRKIRNTARYILGNISDFNPDTDMVDFDKVLPI-------DKWALA 693

Query: 393 VCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKP--WELKKTNPDR--AST 446
             + ++ ++R +  N   H     +    +V   + Y D  K   +  K  +  R  A T
Sbjct: 694 KLNDLITKVRTSYDNYEFHIVYHSIHNFCVVDMSNFYLDVLKDRLYTEKADSLSRRAAQT 753

Query: 447 VLYVTVEVIRQLAILLQAFV 466
           V+YV ++ + ++   L A+ 
Sbjct: 754 VIYVILDAMTRMIAPLLAYT 773



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   H+GHA   I+ D + R+  + G    +  G D HG     KA + AG+     +
Sbjct: 60  YANGDIHLGHALNKILKDFIVRYKNMAGFKAPYVPGWDTHGLPTELKARKKAGIGNSAEI 119

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR 101
             +    R M +     Y +  RT  KR
Sbjct: 120 --SVVELRKMCEEFVKGYINDQRTQFKR 145


>gi|229541183|ref|ZP_04430243.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325603|gb|EEN91278.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 922

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L   +G K    PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSH---QGVLAAQEGLKR---PADLYLEGSDQYRGWFNSSLITSVAVTGRA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V SHGF+L  +G K+SKSLGN I P +V+E++G D +R ++ 
Sbjct: 576 PY-DGVLSHGFVLDGEGRKMSKSLGNTILPGKVVEQLGADIIRLWVA 621



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA    + D++ RF  + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGDLHMGHALNKTLKDIINRFKSMTGYHAPYVPGWDTHGLPIEQELTKKGVDRK---S 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI-LWKKISDKG 117
            +   FR + +       D  RT  KR                 ++  +I ++ +++ KG
Sbjct: 115 MSVAEFRKLCEKYAHEQIDRQRTAFKRLGVRGDWENPYLTLRPAYEAEQIKVFGEMAKKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   D E+
Sbjct: 175 YIYKGLKPVYWSPSSESALADAEI 198


>gi|256826639|ref|YP_003150598.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582782|gb|ACU93916.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 861

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 18/237 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK-GEKIS 304
           ++ P D +V G +    H +Y   F        +L  N P    + + G +    GE +S
Sbjct: 549 RWMPVDQYVGGIEHAILHLLYSRFFTKMLRDMGMLDFNEPF-TNLLTQGMVKDAHGETMS 607

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGNLV 362
           KS GNVI P ++I   G DA+R +++      KD  +D++GL    R    +   + +L+
Sbjct: 608 KSKGNVIAPEDMIAHYGADAVRTYILFMAPPDKDLQWDEEGLAGIYRFLTRVWRQVNDLM 667

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            ++    L D         +  E    +L     RV+ ++  +M+    + A+A ++ L 
Sbjct: 668 GKAGESTLFDPTAQNAGKASSVEQAAKVLRRERHRVVGKVTNDMERNSFNTAIAAIMELS 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + V  Y       E++  +P+ A+    +  EV   L  LL    P  A+++++ + 
Sbjct: 728 NAVGSYVRVASA-EMRAADPELAA----LDREVAEVLVKLLSPMAPHWADELWETVL 779



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 30/60 (50%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ++ K Y+     YP+   H+GH     I DV+AR++ + G +VL   G D  G     AA
Sbjct: 30 DKPKKYVLEMFPYPSGDIHMGHVRNYSIGDVVARYNGMRGFNVLHPMGWDAFGLPAENAA 89


>gi|194246730|ref|YP_002004369.1| Valyl-tRNA synthetase (ValRS) [Candidatus Phytoplasma mali]
 gi|193807087|emb|CAP18525.1| Valyl-tRNA synthetase (ValRS) [Candidatus Phytoplasma mali]
          Length = 863

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 42/224 (18%)

Query: 203 GLKDLSLSRKTFDWGIKIPD--------------------DPQYIMYVWIDALTNYLTTT 242
            L+D  +SR+ + WG  IP                     DP  ++  W  +     +  
Sbjct: 399 NLQDWCISRQLW-WGHSIPAWQKGSKIKVQIESPGKEWKADPD-VLDTWFSSSLWPFSVL 456

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL 297
           G+ +  + +    +P D+ V G DIL F    W + +   +L L  K     V  HG I 
Sbjct: 457 GWPNKDNFNFKHRFPTDVLVTGYDILTF----WVSRMCLQSLHLTHKDPFKDVLLHGLIR 512

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             KG K+SKS  N IDP  VIE+ G D LR+FL    + G D  YD+  +K   + +  N
Sbjct: 513 DSKGNKMSKSKDNGIDPNLVIEKYGTDVLRWFLTTNSSPGMDFNYDE--IKIDASWNFLN 570

Query: 357 GIGNLVSR----SVSMILKDYDG---MIPTPGAFTESDESILSV 393
            I N +SR      ++  +D+D    + P     T+  + +  V
Sbjct: 571 KIWN-ISRFFKLKFNIFTEDFDENKLLFPEKAILTQFKQLLTKV 613


>gi|170021001|ref|YP_001725955.1| leucyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|189083000|sp|B1IYG6|SYL_ECOLC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169755929|gb|ACA78628.1| leucyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|90581608|ref|ZP_01237399.1| leucyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437191|gb|EAS62391.1| leucyl-tRNA synthetase [Vibrio angustum S14]
          Length = 857

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 17/218 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V    DG  +     PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESH---PEFILPIER----RNEVI--SFVKSGLKDLSL 209
           ++    PE +  ++R    R+E +  +F   G  DL +
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEGVELTFNVKGQDDLEV 244


>gi|82775910|ref|YP_402257.1| leucyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123563255|sp|Q32IT9|SYL_SHIDS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81240058|gb|ABB60768.1| leucine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|218688465|ref|YP_002396677.1| leucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|306812926|ref|ZP_07447119.1| leucyl-tRNA synthetase [Escherichia coli NC101]
 gi|29336538|sp|Q8FJY9|SYL_ECOL6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782499|sp|B7MRS9|SYL_ECO81 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218426029|emb|CAR06846.1| leucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|281177792|dbj|BAI54122.1| leucyl-tRNA synthetase [Escherichia coli SE15]
 gi|305853689|gb|EFM54128.1| leucyl-tRNA synthetase [Escherichia coli NC101]
 gi|307552512|gb|ADN45287.1| leucyl-tRNA synthetase [Escherichia coli ABU 83972]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|326693770|ref|ZP_08230775.1| isoleucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 930

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   + T  +LD         +PADL++ G D  R  F++    +   +
Sbjct: 526 IMDVWFDSGSSWAGVMDTREHLD---------YPADLYLEGSDQYRGWFNSSLITSVAAT 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L  KG K+SKSLGN I P++V +++G++ LR + +
Sbjct: 577 GHAPY-KNVLSQGFTLDGKGNKMSKSLGNTISPLDVADQMGIEILRLWTI 625



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQLTKAGHDRKSMPK 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+  ++F+ +  + D   + +I    +      R+   +++ KG 
Sbjct: 118 AAWRDLAKAFALEQVDKQRQDFKRLGIMADWE-NPYITLQPEFEAAQVRVF-GEMAGKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           I+KG    ++S   E+   + E+
Sbjct: 176 IFKGSKPVYWSWSSESALAEAEI 198


>gi|300361465|ref|ZP_07057642.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354084|gb|EFJ69955.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 934

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++    G +   DG     +PADL++ G D  R  F+     +  ++   
Sbjct: 530 ILDVWFDSGSSW---AGVMKERDGLG---FPADLYLEGSDQYRGWFNLSLITSVAVTGKA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF+L  KG K+SKSLGNVI P +V++++G + +R ++ 
Sbjct: 584 PY-KQVLSQGFVLDDKGHKMSKSLGNVISPNDVVKQMGAEIIRLWVA 629



 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           + N   H+GH+   I  D++ RF  ++G    +  G D HG  + +     GV  K
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRK 113


>gi|104774389|ref|YP_619369.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|123251849|sp|Q1G971|SYL_LACDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|103423470|emb|CAI98369.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 804

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D+LR + +          +D +G          +G+   + R  
Sbjct: 578 RGNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWDDNG---------PSGVKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              + D D   IP+     ++D  +  + +  ++ + E+ +    + A++Q++  ++   
Sbjct: 629 RTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVKTVTEHFEELRFNTAISQMMVFMNACQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKG 122
           Y+ 
Sbjct: 148 YEA 150


>gi|42520297|ref|NP_966212.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652677|sp|Q73HW7|SYI_WOLPM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|42410035|gb|AAS14146.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 1111

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLG 308
           K W      I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L 
Sbjct: 593 KEWFESADFITEYIAQTRGWFYTLFVLSTALFNREPF-KNCICHGVVLDVKGQKLSKRLN 651

Query: 309 NVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKR-VNADLANGIGNLVSRSV 366
           N  DP+EV +  G DALR+ ++   I CG +   DK+G   R V  ++   I N  S   
Sbjct: 652 NYADPMEVFDRYGSDALRFLMLSGSIICGGNLLLDKEGNSIRDVLKNVIKPIWN--SYHF 709

Query: 367 SMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +  + DG+        +S  D  ++S C   ++ I+ +M +     A   +I     +
Sbjct: 710 FTMYANADGIKAEVCKDYQSTIDRYMISKCFEAVESIQASMNSYSSQEACKILIDFFEVL 769

Query: 425 DRYFDAQKPWELKKTNPDRAST----VLY-VTVEVIRQLAILL 462
           + ++  +      K++ D+  T    VLY V   ++R  A LL
Sbjct: 770 NNWYIRRSRERFWKSDLDQDKTDAYNVLYTVFYYILRAAAPLL 812


>gi|312795138|ref|YP_004028060.1| Leucyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312166913|emb|CBW73916.1| Leucyl-tRNA synthetase (EC 6.1.1.4) [Burkholderia rhizoxinica HKI
           454]
          Length = 864

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  + + YP+ + H+GH     I DV+ R  R++G +VL   G D  G     AA
Sbjct: 31  DKKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRHRRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +   N     +  + M   +D S +  I T +  ++   + L+ K+ +KG 
Sbjct: 91  IANGVPPAKWTYDNIAYMKKQMQAMGLAIDWSRE--IATCKPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            YK   +  +   D+    +++V    DG+ + +    VQ  E   Y+ R++ Y ++LL
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQV---VDGRGWRS-GAVVQKREIPMYYLRITDYAEQLL 203


>gi|298709584|emb|CBJ31410.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1193

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +PAD    G D  R    ++   +L A L   P  K +  +G +L   G+K+SK L N
Sbjct: 571 KNFPADFIAEGLDQTR--GWFYTLTVLGAALFDKPAFKNLIVNGLVLASDGKKMSKRLKN 628

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLA---NGIGNLVSRS 365
             DP++VI+  G DALR +L+       +   + ++G++  V   L    N     V ++
Sbjct: 629 YPDPMKVIDSHGADALRLYLINSPVVRAESLKFKEEGVQATVREVLLPWFNAFRFFVQQA 688

Query: 366 VSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             + +   D  +P P A  +S    D  I +    ++Q +   M+   ++  + +++  +
Sbjct: 689 RRLEMTCGDRFVPNPEAAAKSTNVMDNWIQATLQGLVQFVHTEMKAYRLYTVVPRLVEFI 748

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVP 467
            ++  ++       LK      ++T  L+   EV+  +++L+    P
Sbjct: 749 EQLTNWYVRLNRNRLKGAEGAESATAGLFCMYEVLSTMSVLMAPITP 795


>gi|194097685|ref|YP_002000725.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|254782423|sp|B4RPY6|SYI_NEIG2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193932975|gb|ACF28799.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 929

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 43/284 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     M VW D+ + + +     +  +      WPADL++ G D  R  F +    
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLT 578

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR---- 331
               S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       
Sbjct: 579 GCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYS 638

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            E+A  K+         +R+   L+    NL            +  +P      E D   
Sbjct: 639 GELAISKEILKRVTESYRRIRNTLSFLFANLSD------FNPIEDAVPQ-AEMVEIDRYA 691

Query: 391 LSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSE----------VDRYFDAQKPWELKKT 439
           L +  R+ + +      +   H A+  ++S  SE           DR +  +     +++
Sbjct: 692 LVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRS 751

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 ----AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|269958908|ref|YP_003328697.1| leucyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848739|gb|ACZ49383.1| leucyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 829

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA + G
Sbjct: 33  CYVLGMFPYPSGNIHMGHIRNYAIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYG 92

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
           V   V+ ++N  + R     + ISY+
Sbjct: 93  VNPAVWTERNIESMRKQLKSIGISYN 118


>gi|237747343|ref|ZP_04577823.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378694|gb|EEO28785.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 879

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA 
Sbjct: 35  KGKFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAM 94

Query: 64  NAGVTTKVFVDQNSRNFRD-MADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  + +  MA + L I +   +   +  ++   + ++ K+ +KG IY+
Sbjct: 95  AHGIPPAEWTYSNIAHMKSQMASMGLAIDWTREMTACKPEYYKWNQWMFLKMLEKGIIYQ 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+ R++ Y ++LL 
Sbjct: 155 KTGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYARITDYAEELLD 207

Query: 179 Y 179
           Y
Sbjct: 208 Y 208


>gi|189083242|sp|A8AJG0|SYL_CITK8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|187732800|ref|YP_001879348.1| leucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|238691683|sp|B2TU77|SYL_SHIB3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187429792|gb|ACD09066.1| leucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|119386320|ref|YP_917375.1| isoleucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119376915|gb|ABL71679.1| Isoleucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 987

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 26/172 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +  R     D++++ +E           R+    + ++G KD  L+      GI  P+D 
Sbjct: 543 FLLRDQRVNDRIIAAFE-----------RDGADDWYRAGFKDEVLA------GIVAPEDY 585

Query: 225 QYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           + +M V +D   +  +T  ++  D  DG+      AD+++ G D  R  F +    A   
Sbjct: 586 EQVMDV-LDVWFDSGSTHAFVLRDRADGAPDGI--ADVYLEGTDQHRGWFQSSLLQACAT 642

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
               P  + V +HGF L  KG K+SKSLGN I P EVI++ G D LR ++ +
Sbjct: 643 KGRAPY-RNVVTHGFTLDEKGMKMSKSLGNTIVPAEVIKQYGADILRLWVAQ 693



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R    +     Y N   HIGHA    I D++ R H++ G D  +  G D HG        
Sbjct: 69  RTPFILHDGPPYANGNLHIGHALNKTIKDIVVRSHQMMGRDARYVPGWDCHGLPIEWKIE 128

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +K  KA  +      +   Q  R F      +DI  ++F R
Sbjct: 129 EKYRKAGLDKDAVDMIEFRQECRRF--AQGWVDIQREEFKR 167


>gi|295691026|ref|YP_003594719.1| isoleucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295432929|gb|ADG12101.1| isoleucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 969

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 16/141 (11%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDG 250
           +++ ++ G  D   +R   D+ + + D  QY     I+ VW D+   +  T       +G
Sbjct: 536 ILAAIREGGADAWFTRPDSDF-LGVHDPAQYEKITDILDVWFDSGCTHAFTI------EG 588

Query: 251 SKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSL 307
            +   WPADL++ G D  R  F +            P  K V +HGF +   GEK+SKS 
Sbjct: 589 REDSHWPADLYLEGSDQHRGWFQSSLLEGSGTRGRAPY-KAVLTHGFTMDENGEKMSKSK 647

Query: 308 GNVIDPIEVIEEVGVDALRYF 328
           GN ++P  + +E G + LR +
Sbjct: 648 GNTVEPQSITKESGAEILRLW 668


>gi|325126199|gb|ADY85529.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 804

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D+LR + +          +D +G          +G+   + R  
Sbjct: 578 RGNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWDDNG---------PSGVKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              + D D   IP+     ++D  +  + +  ++ + E+ +    + A++Q++  ++   
Sbjct: 629 RTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVKTVTEHFEELRFNTAISQMMVFMNACQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKG 122
           Y+ 
Sbjct: 148 YEA 150


>gi|310822829|ref|YP_003955187.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395901|gb|ADO73360.1| Leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 832

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI   + YP+ + H+GH    +I DV AR+ ++ G DVL   G D  G     AA   
Sbjct: 36  KKYILEMLPYPSGKMHMGHVRNYLIGDVYARYFQMKGYDVLHPMGWDAFGLPAENAAIKD 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           GV   V   +N  +F++    L   YD    + T++  ++   +  + ++ ++G +Y+
Sbjct: 96  GVHPAVRTQENITSFKEEIRSLGYCYDWAREVNTSQPEYYRWNQWFFIQMLERGLVYR 153



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 36/245 (14%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSH 293
           Y + P D ++A+ W P D++V G +    H +Y   W   +    L     P+ K++ + 
Sbjct: 525 YAEAPFDAAEARRWLPVDVYVGGPEHAVMHLLYFRFWTRVMKELGLSPVDEPV-KRLVTQ 583

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +    G K+SK  GNV+ P  ++++ G D  R +++      +D  +D    +     
Sbjct: 584 GIVNGSDGRKMSKRWGNVVAPATIVKKYGADTARAYVMFAGPPERD--FDWSDAQ----- 636

Query: 353 DLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
               G    + R  ++++  +   G + T G F      I     + L+ + E ++    
Sbjct: 637 --VEGAFRFLKRVWTLAVSHESVAGTVYT-GPFEGKALEIRRAAHKCLKRVGEAIERLSF 693

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A ++  ++ +     A+ P E                 E IR LA++L  F P +A
Sbjct: 694 NTAIAGIMEYLNALQALGTAETPAEKA------------AMAEAIRVLAVVLTPFTPHIA 741

Query: 471 NKIFD 475
           +++ +
Sbjct: 742 DEVAE 746


>gi|303257887|ref|ZP_07343896.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859230|gb|EFL82312.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 877

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y+   + YP+ + H+GH     + DVL R+ R+ G++V+   G D  G     A
Sbjct: 36  KEKPKFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRGMNVMTPMGWDSFGLPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  + +   + L +++D    + T +  ++   + ++ K+ +KG  
Sbjct: 96  AIAKKVAPAKWTYDNIADMKAQMEPLGLAFDWSREVTTCKPDYYRWNQWMFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+   +  +   D     +++V +G  G    A    V+  E  GY+  ++ Y ++LL
Sbjct: 156 YRKTQTVNWDPVDHTVLANEQVIEGR-GWRSGAI---VEKREIPGYYLGITQYAEELL 209


>gi|296474707|gb|DAA16822.1| leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 617

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N R+ R   D L +  S+D  + T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIRHMRKQLDQLGLCFSWDREVTTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200


>gi|29840370|ref|NP_829476.1| leucyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301688|sp|Q822R7|SYL_CHLCV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29834719|gb|AAP05354.1| leucyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 820

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 13/197 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGYAVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD+     T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPDYYRWTQKLFLFLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y    +  Y        +++EV  G   +G Y   +    QW+       R++AY D+LL
Sbjct: 149 YMADMAVNYCPELGTVLSNEEVENGLSVEGGYPVERRMLRQWI------LRITAYSDQLL 202

Query: 178 SYYE--SHPEFILPIER 192
              E    PE +  ++R
Sbjct: 203 EGLEDLDWPENVKQLQR 219


>gi|307627920|gb|ADN72224.1| leucyl-tRNA synthetase [Escherichia coli UM146]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKCFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|297206419|ref|ZP_06923814.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149545|gb|EFH29843.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 804

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   +K+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKDHDKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVIEE G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   I +     E+D S+  + ++ ++++ E+ ++   + A++Q++  V+E  
Sbjct: 629 RLFVNDLDLDPIVSDKVVEENDGSLDKIYNQTVKKVTEDFESLHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G    V  D+N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGQDPAVVTDENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   ++L  SY  D  ++T++  ++   + +++++   G  Y+      +S        +
Sbjct: 107 KKQLNMLGFSYDWDREVKTSDPNYYKWTQWVFEQMYKMGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +E+  G    G Y   + N  QWM       +++AY D+LL 
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAYADRLLE 202


>gi|194290606|ref|YP_002006513.1| isoleucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|254782383|sp|B3R6E8|SYI_CUPTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193224441|emb|CAQ70452.1| isoleucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 966

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 29/265 (10%)

Query: 230 VWIDALTNYLTTTGY-----LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           VW D+ T + T         L +P   +A    ADL++ G D  R  FH+    A +L  
Sbjct: 561 VWFDSGTTHWTVIRGSHRDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASMLYG 620

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K + +HGF +  +G K+SKS+GN + P ++  ++G + +R ++      G+    
Sbjct: 621 KPPY-KALLTHGFTVDGEGRKMSKSIGNTVSPQDIANKMGAEIIRLWVASTDYSGELSIS 679

Query: 342 DKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD-GMIPTPGA-FTESDESILSVCSRV 397
           D+  LK+ V +   + N +  L+S      L DYD G    P A + E D   +++ +++
Sbjct: 680 DEI-LKRVVESYRRIRNTLRFLLSN-----LSDYDHGKHALPAAEWLEIDRYAVALTAQL 733

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR-----ASTVLY- 449
            +E+  + +    H  +A++ +  SE     Y D  K   L  T PD      A   LY 
Sbjct: 734 QKEVLSHYEAYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAPDSKARRAAQNALYH 792

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           +T  ++  +A  L +F  + A ++F
Sbjct: 793 ITQAMLHWMAPFL-SFTAEEAWQVF 816



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           K  +K  +     Y N   HIGHA   ++ D++ +   L GLD ++  G D HG      
Sbjct: 57  KGAKKFVLHDGPPYANGDIHIGHAVNKVLKDMIIKARGLTGLDAVYVPGWDCHGMPIEIQ 116

Query: 56  --QKIAKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
             +K  K      V  K       +  R M D     VL      ++    +   D  R 
Sbjct: 117 IEKKFGKGLPVQEVQAKARAYATEQIKRQMVDFERLGVLGDWDHPYLTMNYRNEADELRA 176

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 177 L-GKIMEKGYVFRG 189


>gi|170683771|ref|YP_001742758.1| leucyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|226695260|sp|B1LL91|SYL_ECOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|170521489|gb|ACB19667.1| leucyl-tRNA synthetase [Escherichia coli SMS-3-5]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|21355409|ref|NP_647932.1| Leucyl-tRNA synthetase [Drosophila melanogaster]
 gi|7292541|gb|AAF47943.1| Leucyl-tRNA synthetase [Drosophila melanogaster]
 gi|19528361|gb|AAL90295.1| LD44376p [Drosophila melanogaster]
          Length = 869

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 25/190 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA 
Sbjct: 61  QDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y+
Sbjct: 121 QRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W             +F R SA
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLRQWFIRTSA 227

Query: 172 YQDKLLSYYE 181
           Y  +LL   E
Sbjct: 228 YAKQLLDGLE 237


>gi|21673150|ref|NP_661215.1| isoleucyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81791910|sp|Q8KFL5|SYI_CHLTE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21646227|gb|AAM71557.1| isoleucyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 1084

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 18/233 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+ ++  A L+  + P  + V  +G IL K G+K+SKS GNV
Sbjct: 574 KTFPADFIAEGVDQTRGWFYTLHAIATLI-FDRPAYRNVVVNGHILDKSGQKMSKSKGNV 632

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E +E+ G DA+R++L+      +   ++   +++         I    S +  ++ 
Sbjct: 633 VDPFESMEQYGADAIRWYLMITSPPWRPKLFNAAEIEEEQRKFFRAFIN---SYNFFVLY 689

Query: 371 KDYDGM------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-VSE 423
            + DG       IP     +E D  +LS  + ++ E+   M+   +  A   +    V +
Sbjct: 690 ANVDGFRYEEADIPFTQR-SELDRWVLSSLNTLIAEVTSRMEQYDLTGACRLIGDFTVDD 748

Query: 424 VDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  ++   ++K +   +  PD+ S    ++  V+  LA L+  FVP +A KI+
Sbjct: 749 LSNWYIRRSRKRFWKGEMGPDKLSAYQTLST-VLETLAKLMAPFVPFIAEKIW 800


>gi|116514487|ref|YP_813393.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274781|sp|Q049B7|SYL_LACDB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116093802|gb|ABJ58955.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 804

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D+LR + +          +D +G          +G+   + R  
Sbjct: 578 RGNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWDDNG---------PSGVKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              + D D   IP+     ++D  +  + +  ++ + E+ +    + A++Q++  ++   
Sbjct: 629 RTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVKTVTEHFEELRFNTAISQMMVFMNACQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKG 122
           Y+ 
Sbjct: 148 YEA 150


>gi|325830439|ref|ZP_08163896.1| leucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487906|gb|EGC90344.1| leucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 859

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 35/249 (14%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK-GE 301
           KA  W P D ++ G +    H +Y   +        LL  + P    +   G +  + GE
Sbjct: 548 KANRWMPVDQYIGGIEHAILHLLYSRFYTKVLRDLGLLEFDEPF-SNLLCQGMVKDEHGE 606

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            +SKS GNVI P ++I E G DA+R +++      KD  +D+ GL          GI   
Sbjct: 607 TMSKSKGNVIAPEDMIAEYGADAVRAYILFMAPPDKDLLWDEGGLA---------GIYKF 657

Query: 362 VSRSVSMILKDYDG-----MIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHR 412
           ++R+   I+ D  G      +  PGA  +      E ++    RV+ ++ ++      + 
Sbjct: 658 MNRAWR-IVNDLMGAADEETLYQPGASEDEGIKALEQLVRERHRVVGKVVDDFDRNNFNT 716

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           ALA ++ L +    Y     P E       RA     V  EV   L  LL  F P  A +
Sbjct: 717 ALAAIMELTNAASDYLRKCSPEERAGCEGSRA-----VDAEVAEVLVKLLAPFAPHWAEE 771

Query: 473 IFDILFVAD 481
           ++  +   D
Sbjct: 772 LWHAVLGKD 780



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GH     I DV+AR++++ G DVL   G D  G     AA 
Sbjct: 33  KPKKYVLEMFPYPSGDIHMGHVRNYTIGDVVARYYKMRGFDVLHPMGWDAFGLPAENAAI 92

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    T   +D    +F+ M      SYD
Sbjct: 93  KRNSHPAKWTYANIDTQKASFKRMG----FSYD 121


>gi|325989668|ref|YP_004249367.1| isoleucyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574753|emb|CBZ40409.1| Isoleucyl-tRNA synthetase [Mycoplasma suis]
          Length = 911

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+       + +  N D  +   +P+D++V G D LR  F++    + L    LP  
Sbjct: 527 VWFDS------GSAFFLNKD-KEGNVYPSDVYVEGGDQLRGWFNSSSILSLLTLGKLPF- 578

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           K + +HGF+L  KG K+SKS GNVIDP+E++ + G D  R ++
Sbjct: 579 KSLVAHGFVLDEKGHKMSKSKGNVIDPLEMVSKYGADIFRLWI 621


>gi|319760449|ref|YP_004124387.1| leucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039163|gb|ADV33713.1| leucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 867

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 8/179 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + I YP+ + H+GH     I DV++R+ R+ G +VL   G D  G    +A
Sbjct: 30  KSKQKYYCLSMIPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGLPAEQA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L  +YD    I T + +++   +  +  +  KG +
Sbjct: 90  AITNNTNPSDWTYANIDYMKNQLKSLGFAYDWSREIITCQPQYYKWEQWFFNFLYKKGLV 149

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W S  +    N+  V    +   +  Q N +Q+ +   +F +++ Y  +LL
Sbjct: 150 YKKTTIVNWCSYHETVLANEQVV----NNSCWRCQ-NQIQYKKMPQWFIKITDYAKELL 203


>gi|300681548|emb|CBH32645.1| leucyl-tRNA synthetase, putative, expressed [Triticum aestivum]
          Length = 965

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K YI     YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 87  RPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMKGFNVLHPMGWDAFGLPAEQYA 146

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K    +N  +FR     L  SY  D  I TTE  ++   + ++ ++  +G  Y
Sbjct: 147 IQTGTHPKTTTARNIDHFRTQLKSLGFSYDWDREISTTEPAYYKWTQWIFLQLLKRGLAY 206

Query: 121 KG 122
           + 
Sbjct: 207 QA 208



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 41/181 (22%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 725 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 775

Query: 362 VSRSVSMILKD-------YDGMIPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRA 413
           + R+  +++          DG   T    T     +L  C +RV +EI+E   N      
Sbjct: 776 LGRTWRLVVGAPLPDGSYKDGTTATDVEPTFEQLRVLHKCIARVSEEIQETRFN------ 829

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                + +S +  + +A   W+   T P            VI    +LL  F P LA ++
Sbjct: 830 -----TAISAMMEFVNAAYKWD---TQPK----------SVIDSFVLLLAPFAPHLAEEL 871

Query: 474 F 474
           +
Sbjct: 872 W 872


>gi|307730979|ref|YP_003908203.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585514|gb|ADN58912.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 863

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 16/187 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 91  MANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V +G     G     +  P+       Y+ R++ Y D+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIEGRGWRSGALVEKREIPM-------YYMRITQYADE 201

Query: 176 LLSYYES 182
           LL+  E 
Sbjct: 202 LLNDLEG 208


>gi|283784421|ref|YP_003364286.1| leucyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947875|emb|CBG87436.1| leucyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|226311582|ref|YP_002771476.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782487|sp|C0ZB13|SYL_BREBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226094530|dbj|BAH42972.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 805

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 30  KKKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F + N   FR     L  SY  D  I TT+  ++   + ++ K+ + G  Y
Sbjct: 90  LDTGNDPAEFTEHNINTFRRQIKSLGFSYDWDREINTTDPHYYKWTQWIFTKLYEHGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV+    + +  +++AY ++LL+ 
Sbjct: 150 IDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWVLKITAYAERLLAD 204

Query: 180 YES--HPEFILPIER 192
            +    PE I  ++R
Sbjct: 205 LDELDWPESIKEMQR 219



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFI 296
           L +PD  K K W P D+++ G +    H +Y   W  FL    +   K    K+F+ G I
Sbjct: 512 LADPD--KLKEWLPIDIYIGGAEHAVLHLLYSRFWHKFLYDIGVVPTKEPFQKLFNQGMI 569

Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           L    EK+SKS GNV++P ++I+  G D LR +
Sbjct: 570 LGENNEKMSKSKGNVVNPDDIIDSHGADTLRMY 602


>gi|261341263|ref|ZP_05969121.1| leucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288316567|gb|EFC55505.1| leucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCDTK-VERKEIPQWFIKITAYADELLN 204


>gi|163733496|ref|ZP_02140939.1| isoleucyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161393284|gb|EDQ17610.1| isoleucyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 1009

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 11/117 (9%)

Query: 221 PDDPQYIMY---VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD   +M    VW D+ + +  T    D  DGS+     ADL++ G D  R  FH+   
Sbjct: 607 PDDYDQVMDILDVWFDSGSTHAFT--LRDRADGSEDGL--ADLYLEGTDQHRGWFHSSML 662

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            A       P  + V +HGF L  KG K+SKSLGN + P ++I++ G D LR ++ +
Sbjct: 663 QACGTMGRAPY-RAVLTHGFTLDEKGMKMSKSLGNTVAPEKIIQQYGADILRLWVAQ 718


>gi|300727544|ref|ZP_07060935.1| leucine--tRNA ligase [Prevotella bryantii B14]
 gi|299775247|gb|EFI71848.1| leucine--tRNA ligase [Prevotella bryantii B14]
          Length = 952

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIFARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKI 113
            A   G    +  +QN  ++R+  D +  S+  D  +RT + +++   +  ++K+
Sbjct: 88  YAIQTGQHPAITTEQNISHYREQLDKIGFSFDWDREVRTCDPKYYHWTQWAFEKM 142



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 260 LHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++++  DIL   A   W     +A   L    ++ G+ +   EK+SKS+ NV++P +++E
Sbjct: 683 VNLVKNDILDTEAFKQWRPEYANAEFILEDGKYNCGWAI---EKMSKSMFNVVNPDDIVE 739

Query: 319 EVGVDALRYF 328
           E G D LR +
Sbjct: 740 EYGADTLRLY 749


>gi|296103393|ref|YP_003613539.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057852|gb|ADF62590.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|290890672|ref|ZP_06553742.1| hypothetical protein AWRIB429_1132 [Oenococcus oeni AWRIB429]
 gi|290479647|gb|EFD88301.1| hypothetical protein AWRIB429_1132 [Oenococcus oeni AWRIB429]
          Length = 921

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 37/268 (13%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   +    YLD         +PAD+++ G D  R  F++    +  ++
Sbjct: 526 IMDVWFDSGSSWSGVMQERSYLD---------YPADVYLEGADQFRGWFNSNIITSVAVN 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K V + GF+   KG+K+SKSLGN+I P +V  ++G + +R + V  I   +D  
Sbjct: 577 GIAPY-KSVIAQGFVFDDKGQKMSKSLGNIISPNDVANQMGTEIVRLW-VMSIDSSQDVH 634

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-----ILSVCS 395
             KD LK+   +         +  ++  +L + +   P   +   SD       + +  +
Sbjct: 635 VSKDILKQVSES------YRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTADFN 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW----ELKKTNPDRASTVLY 449
           + +++  E M     +    Q+I+ VS      Y D  K      E   +      TV Y
Sbjct: 689 QFIKDWHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFY 748

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
              E+  +L  LL  F+P  A ++++ L
Sbjct: 749 ---EISVKLTKLLTPFLPHTAEELWENL 773



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I  D++ R+  + G +  +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWDTHGLPIEQQLTKAGYDRKSMSK 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         V+   R+F+ +  VL    + ++    +      R+    ++ KG 
Sbjct: 118 ADWRRLAHDYALKQVEMQKRDFKRLG-VLGEWDNPYLTLNPEFEAAQVRVF-GAMAGKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + EV
Sbjct: 176 IYRGLKPVYWSWSSESALAEAEV 198


>gi|241759700|ref|ZP_04757800.1| isoleucine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319708|gb|EER56104.1| isoleucine--tRNA ligase [Neisseria flavescens SK114]
          Length = 929

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  +      WPADL++ G D  R  F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVKQREELE------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKE- 646

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCS 395
                 + KRV           +  ++S +  +     P   A  ++D    +    V +
Sbjct: 647 ------ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLA 695

Query: 396 RVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDR 443
           R LQE    +       H ++  ++S  SE           DR +  +     +++    
Sbjct: 696 RQLQERLAGDYYPRYAFHFSVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS---- 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           A T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 752 AQTALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 788



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|241760226|ref|ZP_04758322.1| leucine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319337|gb|EER55802.1| leucine--tRNA ligase [Neisseria flavescens SK114]
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|206577993|ref|YP_002239703.1| leucyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288936545|ref|YP_003440604.1| leucyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238064869|sp|B5XZR2|SYL_KLEP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|206567051|gb|ACI08827.1| leucyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288891254|gb|ADC59572.1| leucyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|77461178|ref|YP_350685.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123758186|sp|Q3K6B0|SYL_PSEPF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77385181|gb|ABA76694.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 16/181 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N        R +   +D S +  + T +  ++   + L+ ++ +KG I
Sbjct: 92  KNNVAPAKWTYENIAYMKSQLRSLGLAVDWSRE--VTTCKPDYYRWEQWLFTRLFEKGVI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+   +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+L
Sbjct: 150 YRKNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADEL 202

Query: 177 L 177
           L
Sbjct: 203 L 203


>gi|30062169|ref|NP_836340.1| leucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479706|ref|NP_706568.2| leucyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|48428544|sp|Q83LX5|SYL_SHIFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30040414|gb|AAP16146.1| leucine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383257|gb|AAN42275.2| leucine tRNA synthetase [Shigella flexneri 2a str. 301]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|116491156|ref|YP_810700.1| isoleucyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116091881|gb|ABJ57035.1| Isoleucyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 921

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 37/268 (13%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   +    YLD         +PAD+++ G D  R  F++    +  ++
Sbjct: 526 IMDVWFDSGSSWSGVMQERSYLD---------YPADVYLEGADQFRGWFNSNIITSVAVN 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  K V + GF+   KG+K+SKSLGN+I P +V  ++G + +R + V  I   +D  
Sbjct: 577 GIAPY-KSVIAQGFVFDDKGQKMSKSLGNIISPNDVANQMGTEIVRLW-VMSIDSSQDVH 634

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-----ILSVCS 395
             KD LK+   +         +  ++  +L + +   P   +   SD       + +  +
Sbjct: 635 VSKDILKQVSES------YRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTADFN 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW----ELKKTNPDRASTVLY 449
           + +++  E M     +    Q+I+ VS      Y D  K      E   +      TV Y
Sbjct: 689 QFIKDWHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFY 748

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
              E+  +L  LL  F+P  A ++++ L
Sbjct: 749 ---EISVKLTKLLTPFLPHTAEELWENL 773



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I  D++ R+  + G +  +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWDTHGLPIEQQLTKAGYDRKSMSK 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         V+   R+F+ +  VL    + ++    +      R+    ++ KG 
Sbjct: 118 ADWRRLAHDYALKQVEMQKRDFKRLG-VLGEWDNPYLTLNPEFEAAQVRVF-GAMAGKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + EV
Sbjct: 176 IYRGLKPVYWSWSSESALAEAEV 198


>gi|283956488|ref|ZP_06373968.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792208|gb|EFC30997.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 809

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|152969245|ref|YP_001334354.1| leucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166231616|sp|A6T6A3|SYL_KLEP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150954094|gb|ABR76124.1| leucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|322517529|ref|ZP_08070398.1| leucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322123789|gb|EFX95363.1| leucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 833

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWM 160
           +      W      A  N++ +  G    G Y   +    QWM
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM 193


>gi|219685858|ref|ZP_03540665.1| leucine--tRNA ligase [Borrelia garinii Far04]
 gi|219672588|gb|EED29620.1| leucine--tRNA ligase [Borrelia garinii Far04]
          Length = 451

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  DG       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|162455699|ref|YP_001618066.1| leucyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|189083150|sp|A9EYY7|SYL_SORC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161166281|emb|CAN97586.1| leuS [Sorangium cellulosum 'So ce 56']
          Length = 854

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 25/254 (9%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+    H+GH       D+++R+ R+ G+DVL   G D  G    + A
Sbjct: 59  RGKRYVLDMFPYPSGSGLHVGHPEGYTATDIMSRYFRMRGIDVLHVMGWDAFGLPAEQHA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N   F+    +L  SYD    + TT+ R+    + ++ ++  KG  Y
Sbjct: 119 LETGTHPADTTARNIATFKRQLKMLGFSYDWSRELSTTDPRYVRWTQWIFLQLFKKGLAY 178

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           +   S  W         N++ +    DG+     H PV       +  R++AY D+L   
Sbjct: 179 QDEVSVNWCPALGTVLANEEVI----DGKSERGSH-PVYRTPLRQWMLRITAYADRLAED 233

Query: 180 YE--SHPEFILPIER----RNE--VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
                 PE  + ++R    R+E  +I+F   G    +LS  T       PD    + YV 
Sbjct: 234 LRLLDWPEGTVAMQRSWIGRSEGALITFEVKGWGKGALSVFT-----TRPDTLMGVTYVV 288

Query: 232 I---DALTNYLTTT 242
           +     LT +LT+ 
Sbjct: 289 LAPEHPLTTWLTSA 302



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK-GEKISKSLG 308
           P DL+V G +    H +Y   W   L        P P  K+   G IL +  EK+SKS G
Sbjct: 580 PVDLYVGGAEHGVLHLLYARFWHKVLYDLGHVKHPEPFAKLVHQGMILGEDNEKMSKSRG 639

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NVI+P +++   G D LR +
Sbjct: 640 NVINPDDIVRAHGADVLRMY 659


>gi|116074843|ref|ZP_01472104.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
 gi|116068065|gb|EAU73818.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
          Length = 882

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 1/104 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 46  RPPFYALSMFPYPSGSLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAI 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G+   V+ D N    RD    L +S  D+ R     H D  R
Sbjct: 106 ERGIDPGVWTDHNIGQMRDQLGRLGLSI-DWTREQATCHDDYYR 148



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGI 358
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++   R    L   +
Sbjct: 635 EKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLWRLV 694

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
            +  + +   +    DG +  P   +E+++ +       + EI E++      + A++++
Sbjct: 695 ESAATNADQPVCLSGDGALTLPAELSEAEQEVRRAVHTAIAEIGEDLSGDFQFNTAISEL 754

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + L + +    +   P                V  E +  L  LL  F P LA + +
Sbjct: 755 MKLSNALSGALETVTP---------------AVRQEALSVLIRLLAPFAPHLAEEFW 796


>gi|88800791|ref|ZP_01116348.1| isoleucyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776497|gb|EAR07715.1| isoleucyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 829

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 21/180 (11%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HPE    IE   +V+   + G+     +   FD    I D  QY      + VW D+ 
Sbjct: 377 ELHPELPKIIEAVAKVVE--QEGMD----AWYDFDLSTVISDADQYEKTKDTLDVWFDSG 430

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSH 293
             +  +      P+  +   +PAD+++ G D  R  F +    A  ++   P  K+V +H
Sbjct: 431 VTH--SAVLRKRPELGQ---YPADMYLEGSDQHRGWFQSSLKTAVAINGTAPY-KQVLTH 484

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           GF++  KG K+SKSLGN ++P EV  + G D LR ++      G D  + +D LK+  ++
Sbjct: 485 GFVVDEKGYKMSKSLGNGMEPQEVFNQFGADILRLWVASADYSG-DMAFSRDILKRSADS 543


>gi|114567117|ref|YP_754271.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317896|sp|Q0AWK4|SYL_SYNWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114338052|gb|ABI68900.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 824

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH     I DV+ARF  ++G +VL   G D  G     AA
Sbjct: 31  EKPKYYNLEMFPYPSGHLHMGHVRNYAIGDVVARFKSMNGFNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  N +     + ISY  D  + T +  ++   + ++ K+ +    Y
Sbjct: 91  IKNAIHPATWTYSNIENMKRQLKTMGISYDWDRELATCKPDYYKFTQWMFLKLYENKLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +    +    +++V  GA  +        ++  + E +FF+++ Y  +LL
Sbjct: 151 KKKSAVNWCPSCQTVLANEQVVDGACERCEAV----IEKKQLEQWFFKITDYAQRLL 203



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 46/268 (17%)

Query: 233 DALTNYLTTTGYLD---NPDGSKAKF-------W-PADLHVIGKDILRFHAIYWPAF--- 278
           D +  ++ ++ Y D   +P  SK  F       W P D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFVCSSWYFDRFCSPHESKQPFSREAVDYWMPVDQYIGGVEHAILHLMYARFFTKF 553

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +LS   P   ++ + G +L    K+SKS GNV+ P E+I+  G D  R F++   
Sbjct: 554 LFDINVLSCQEPF-TRLLTQGMVLKDNAKMSKSKGNVVSPEEIIDTYGADTARLFILFAS 612

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  + + G++        N +  LVS     I KD    +P    F E D    ++
Sbjct: 613 PPERDLEWSEQGVEGAFR--FLNRVWRLVSELAEGI-KD----LPAAEHFPELDSEAKNL 665

Query: 394 ---CSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKP-WELKKTNPDRASTVL 448
                  ++++ E++  +   + A++ ++ L + +  Y   +KP W + K          
Sbjct: 666 RFKTHATIKKVTEDIGERFNFNTAISAIMELSNTLGAYKGIKKPNWPVVK---------- 715

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDI 476
               E +  L ILL  F P +  +++ +
Sbjct: 716 ----EAVDNLLILLSPFSPHICEELWQL 739


>gi|330006003|ref|ZP_08305457.1| leucine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328536018|gb|EGF62427.1| leucine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|307747993|gb|ADN91263.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 809

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|288801800|ref|ZP_06407242.1| leucine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288335842|gb|EFC74275.1| leucine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 968

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
              G   ++  D N   +R+  D +  S+  D  +RT + R++
Sbjct: 90  IQTGQHPQLTTDTNIARYREQLDKIGFSFDWDREVRTCDPRYY 132


>gi|323527344|ref|YP_004229497.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384346|gb|ADX56437.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 863

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 16/187 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 91  MANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V +G     G     +  P+       Y+ R++ Y D+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIEGRGWRSGALVEKREIPM-------YYMRITQYADE 201

Query: 176 LLSYYES 182
           LL+  E 
Sbjct: 202 LLNDLEG 208


>gi|225631279|ref|ZP_03787959.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591024|gb|EEH12226.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 1067

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLG 308
           K W      I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L 
Sbjct: 546 KEWFESADFITEYIAQTRGWFYTLFVLSTALFDREPF-KNCICHGVVLDVKGQKLSKRLN 604

Query: 309 NVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKR-VNADLANGIGNLVSRSV 366
           N  DP+EV +  G DALR+ ++   I CG +   DK+G   R V  ++   I N  S   
Sbjct: 605 NYADPMEVFDRYGSDALRFLMLSGSIVCGGNLLLDKEGNSIRDVLKNVIKPIWN--SYHF 662

Query: 367 SMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +  + DG+        +S  D  ++S C   ++ I+ +M +     A   +++    +
Sbjct: 663 FTMYANADGIKAEVCKDYQSTIDHYMISKCFEAIESIQASMNSYNSQEACKILMNFFEVL 722

Query: 425 DRYFDAQKPWELKKTNPDRAST----VLY-VTVEVIRQLAILL 462
           + ++  +      K++ D+  T    VLY V   ++R  A LL
Sbjct: 723 NNWYIRRSRERFWKSDLDQDKTDAYNVLYTVFYYILRAAAPLL 765


>gi|146310834|ref|YP_001175908.1| leucyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980077|sp|A4W827|SYL_ENT38 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145317710|gb|ABP59857.1| leucyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 894

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|17547463|ref|NP_520865.1| leucyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|48428559|sp|Q8XVT3|SYL_RALSO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17429766|emb|CAD16451.1| probable leucyl-trna synthetase (leucine--trna ligase) (leurs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 877

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMMRQLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+ R++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPIDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLRITDYAQELLS 210


>gi|121997481|ref|YP_001002268.1| valyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588886|gb|ABM61466.1| valyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 917

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 126/323 (39%), Gaps = 58/323 (17%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           R+E     + GL D  L+R          DD   ++  W  +     +T G+ +  D  +
Sbjct: 423 RSEAEVRERHGLGDAPLTRD---------DD---VLDTWFSSALWPFSTLGWPEQTDALR 470

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNV 310
             F+P  + V G DI+ F       F L     +P ++++ HG +   +G+K+SKS GNV
Sbjct: 471 T-FYPTSVLVTGFDIIFFWVARMIMFGLHFMGEVPFREIYIHGLVRDPEGQKMSKSKGNV 529

Query: 311 IDPIEVIEEV-------------------------------------GVDALRYFLVREI 333
           +DP+++++ +                                     G DALR+      
Sbjct: 530 LDPLDIVDGIDLESLVTKRTADMMQPQLAERIEAMTRRHYPDGIKAHGTDALRFTFASLA 589

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G+D  +D   ++   N    N + N  +R V M  +  D     P     ++  I S 
Sbjct: 590 TTGRDVVFDLGRVEGYRN--FCNKLWN-AARYVLMNTEGADCGSGGPVELGAAERWIRSR 646

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             R + E+R+   +  + +A   +     +   D Y +  KP  L++    +A       
Sbjct: 647 LDRTVAEVRQAFADYRLDQAAQAIYEFTWDEYCDWYLELSKP-ALREGTAAQARGTRQTL 705

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
           ++V+ +L  L    +P +   I+
Sbjct: 706 IQVLEELLRLTHPLMPFITEAIW 728



 Score = 43.9 bits (102), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA++  + D L R+HR+DG + L+  GTD           +AG+ T++ V++ 
Sbjct: 47 HMGHAFQDTVMDALVRYHRMDGHNTLWQPGTD-----------HAGIATQMVVERQ 91


>gi|86150411|ref|ZP_01068637.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596594|ref|ZP_01099831.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562705|ref|YP_002344484.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|14285781|sp|Q9PNK3|SYL_CAMJE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85839236|gb|EAQ56499.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191435|gb|EAQ95407.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360411|emb|CAL35208.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926320|gb|ADC28672.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929925|gb|EFV09083.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 809

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|326422518|gb|EGD71914.1| Aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 779

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 17/176 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
            W+D+  + L  T YL + +   +K +P  L   G DI+R    Y     + L+  LP  
Sbjct: 464 TWMDSSVSALYVTKYLYDKEFF-SKTYPMTLRPQGIDIVRTWLNYSILRNYQLTEKLPW- 521

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K  +  G  L + GEK+SKS GN +DP  VIE+ G DA R++ V E   G +  + +  L
Sbjct: 522 KTAWIDGMGLDEHGEKMSKSKGNGVDPTIVIEKYGADAFRFWAVSEAMPGSNFMFSESRL 581

Query: 347 KKRVNADLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +         G    +++  +V+ ++K +      P   TESD  I+    ++  E
Sbjct: 582 Q---------GSSKFLTKLWNVARLIKQFPAQEDRP-TITESDRWIIEYTKKITNE 627


>gi|237730627|ref|ZP_04561108.1| leucyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906166|gb|EEH92084.1| leucyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 211


>gi|302185150|ref|ZP_07261823.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|295096606|emb|CBK85696.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|283834051|ref|ZP_06353792.1| leucine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070194|gb|EFE08303.1| leucine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|115377905|ref|ZP_01465090.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115365065|gb|EAU64115.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 865

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI   + YP+ + H+GH    +I DV AR+ ++ G DVL   G D  G     AA   
Sbjct: 69  KKYILEMLPYPSGKMHMGHVRNYLIGDVYARYFQMKGYDVLHPMGWDAFGLPAENAAIKD 128

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           GV   V   +N  +F++    L   YD    + T++  ++   +  + ++ ++G +Y+
Sbjct: 129 GVHPAVRTQENITSFKEEIRSLGYCYDWAREVNTSQPEYYRWNQWFFIQMLERGLVYR 186



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 36/245 (14%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSH 293
           Y + P D ++A+ W P D++V G +    H +Y   W   +    L     P+ K++ + 
Sbjct: 558 YAEAPFDAAEARRWLPVDVYVGGPEHAVMHLLYFRFWTRVMKELGLSPVDEPV-KRLVTQ 616

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +    G K+SK  GNV+ P  ++++ G D  R +++      +D  +D    +     
Sbjct: 617 GIVNGSDGRKMSKRWGNVVAPATIVKKYGADTARAYVMFAGPPERD--FDWSDAQ----- 669

Query: 353 DLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
               G    + R  ++++  +   G + T G F      I     + L+ + E ++    
Sbjct: 670 --VEGAFRFLKRVWTLAVSHESVAGTVYT-GPFEGKALEIRRAAHKCLKRVGEAIERLSF 726

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A ++  ++ +     A+ P E                 E IR LA++L  F P +A
Sbjct: 727 NTAIAGIMEYLNALQALGTAETPAEKA------------AMAEAIRVLAVVLTPFTPHIA 774

Query: 471 NKIFD 475
           +++ +
Sbjct: 775 DEVAE 779


>gi|329903782|ref|ZP_08273614.1| Isoleucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548213|gb|EGF32915.1| Isoleucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 962

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 8/103 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T + T    L       + F PADL++ G D  R  FH+    + +L+   P  
Sbjct: 563 VWFDSGTTHQTV---LRGSHAQSSHF-PADLYLEGSDQHRGWFHSSLLTSSMLNGCAPY- 617

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           K + +HGF++  +G+K+SKS+GNV+ P +V + +G D LR ++
Sbjct: 618 KTLLTHGFVVDGEGKKMSKSVGNVVAPQKVADSLGADILRLWV 660



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R    +     Y N   HIGHA   ++ D++ +   L G D  +  G D HG  I
Sbjct: 61  KGRPLFVLHDGPPYANGDIHIGHAVNKVLKDIVVKSRNLAGFDAPYVPGWDCHGMPI 117


>gi|323144575|ref|ZP_08079164.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415651|gb|EFY06396.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 939

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 32/270 (11%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLP--LP-KKVFSHGFILH-KGEKISKSLGNVIDP 313
           AD+++ G D  R    +  + +LS  +    P ++V +HGF +   G K+SKSLGNVI P
Sbjct: 559 ADMYLEGSDQHR--GWFMSSLMLSVAMKDKAPYRQVLTHGFTVDGNGRKMSKSLGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             V++++G D LR ++       EIA   + F       +RV   +   + NL       
Sbjct: 617 QSVMDKLGADVLRLWVASTDYTGEIAVSDEIFKRSSDSYRRVRNTIRFLLANLSGFDPQK 676

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRY 427
            L ++D MI       E D+  +S  ++V +EIR    N   H  +  ++   S E+  +
Sbjct: 677 DLVEFDKMI-------ELDKWAVSQAAKVQKEIRAYYDNYDFHMVVQNLMHFCSIELGSF 729

Query: 428 F-----DAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILL----QAFVPKLANKIFDIL 477
           +     D Q   +          + LY+  E +IR +A +L    Q     +  K  + +
Sbjct: 730 YLDIIKDRQYTAKADSLARRSCQSALYLIAEALIRWIAPVLSFTAQEAWEAMPGKRDEFV 789

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           F A      + LD   K G   H  +D I 
Sbjct: 790 FTATWFDGLKELDDNAKFG---HAYWDRIL 816


>gi|303237201|ref|ZP_07323771.1| valine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482588|gb|EFL45613.1| valine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 897

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 29/254 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP+  + K++ P    V G DI+ F    W A ++ A        P  K V+  G + 
Sbjct: 493 INNPENEEVKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRQTFPF-KHVYFTGIVR 547

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+E+I + G D +R  ++     G D  +D+   ++  N    N
Sbjct: 548 DNIGRKMSKSLGNSPDPLELIAKYGADGVRMGMMLSAPAGNDILFDESLCEQGRN--FNN 605

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N           D D          E+++  +      L+E+   M+ Q     +++
Sbjct: 606 KIWNAFRLVQGWETADIDQ--------PEANKIAIKWFDAKLKEVNAEMEEQFKSYRISE 657

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ----LAILLQAFVPKLANK 472
            +  V ++  ++D    W L+   P+    +   T E   +    L  +L  F+P +  +
Sbjct: 658 ALMTVYKL--FWDEFSSWYLEMIKPEYGKPIDKQTYEATLRFFDTLLKMLHPFMPFITEE 715

Query: 473 IFDILFVADENRCF 486
           ++  +F   EN   
Sbjct: 716 LWQHIFDRKENESI 729


>gi|302344802|ref|YP_003813155.1| leucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149393|gb|ADK95655.1| leucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 968

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
              G   ++  D N   +R+  D +  S+  D  +RT + R++
Sbjct: 90  IQTGQHPQLTTDTNIARYREQLDKIGFSFDWDREVRTCDPRYY 132


>gi|167580110|ref|ZP_02372984.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 945

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPAE-QWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +    + +++    A T LY VT 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASKARRS----AQTALYHVTQ 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A ++F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|56461050|ref|YP_156331.1| valyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821717|sp|Q5QY15|SYV_IDILO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56180060|gb|AAV82782.1| Valyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 949

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 160/410 (39%), Gaps = 115/410 (28%)

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD--DPQYIMYV------------ 230
           EF+ P +  N   S+++  ++D  +SR+ + WG +IP   D Q  +YV            
Sbjct: 403 EFV-PKQYENMYFSWMRD-IQDWCISRQLW-WGHRIPAWYDEQGNVYVGRTEEEVREKHN 459

Query: 231 ---------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
                          W  +     +T G+  N +  K  F P D+ V G DI+ F    W
Sbjct: 460 LGDTPLQQDEDVLDTWFSSALWTFSTLGWPKNTEDLKT-FHPTDVLVTGFDIIFF----W 514

Query: 276 PAFLLSANL----------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV--- 320
            A ++   +           +P KKV+  G I   +G+K+SKS GNV+DP+++I+ +   
Sbjct: 515 VARMIMMTMHFMKDEEGQPQVPFKKVYVTGLIRDEEGQKMSKSKGNVLDPLDMIDGISAD 574

Query: 321 ----------------------------------GVDALRYFLVREIACGKDGFYDKDGL 346
                                             G DALR+ L    + G+D  +D   L
Sbjct: 575 ELVAKRTANLMQPKMREKIEKRTRKEFPEGITAHGTDALRFTLTALASTGRDINWDMKRL 634

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +   N    N + N  SR V M  +++D G+       + +DE I++  +  +++ R+ +
Sbjct: 635 EGYRN--FCNKLWN-ASRYVLMSTEEHDCGLENDDMTLSLADEWIIARFNSTVKDFRQAL 691

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
                 +A A           D Y +  KP  L+     +     +  V V+ QL  LL 
Sbjct: 692 DTYRFDQAAAIAYEFTWNQFCDWYLELTKP-VLQNGTESQQRGTRHTLVNVLEQLLRLLH 750

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI----FPR 509
             +P +   I+                QR+KP  ++  T D I    FPR
Sbjct: 751 PVMPYITETIW----------------QRVKP--LVGNTDDTIMLQPFPR 782



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 24/135 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKI 58
           S  I  PN     H+GHA++  I D L R+ R+DGL+ L+  G+D  G         Q  
Sbjct: 34  SIMIPPPNVTGSLHMGHAFQHTIMDTLTRYQRMDGLNTLWQVGSDHAGIATQMVVERQLA 93

Query: 59  AKAAQNAGVTTKVFVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           A+      +    F+D+            ++  R + D +D   + F  T ++   D  R
Sbjct: 94  AQGQTRQELGRDAFIDKIWEWKEQSGGTITQQMRRLGDSVDWDRERF--TMDEGLSDAVR 151

Query: 108 ILWKKISDKGDIYKG 122
            ++ K+ +   IY+G
Sbjct: 152 EVFVKLHEDNLIYRG 166


>gi|325294834|ref|YP_004281348.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++         P+ S    WPAD+++ G D  R  F A    +       
Sbjct: 532 ILDVWFDSGSSHAAVLE--RRPELS----WPADMYLEGSDQHRGWFQASLLESCGTRKEA 585

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF L  KG K+SKSLGNV+ P +V+++ G D LR ++  E
Sbjct: 586 PY-KSVLTHGFTLDEKGHKMSKSLGNVVAPEDVVKKFGADILRLWVASE 633



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +     Y N   HIGHA   I+ D++ +   + G    F  G D HG  I +A    
Sbjct: 52  KFVLHDGPPYANGHIHIGHALNKILKDIVVKSKSMQGYQTPFVPGWDCHGLPIERAVFQK 111

Query: 66  GVTTKVFVD--QNSRNFRDMA-DVLDISYDDFIR 96
               K  VD     +  R+ A + ++I  ++FIR
Sbjct: 112 LKKRKDEVDPIDVRKKCREYATNWVNIQREEFIR 145


>gi|256396396|ref|YP_003117960.1| valyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362622|gb|ACU76119.1| valyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 882

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 13/259 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +T G+ +      AKF+P  +   G DI+ F     + +  + +   
Sbjct: 457 VLDTWFSSGLWPFSTLGWPER-TADLAKFYPTSVLHTGYDIIFFWVARMMMFGLYAMDGK 515

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V S       G+K+SKS GN +DP+E +++ G DA+R+ L+R    G D    +
Sbjct: 516 QPFDKVVLSGLVRDQFGKKMSKSKGNGVDPLEWMDKFGSDAVRFGLLRGANPGSDQAVAE 575

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D +    N   A  I N  +R   M        +P+    T  D  ILS  + V+ E+  
Sbjct: 576 DWIAGARN--FATKIWN-ATRFAMMNGAYVPAELPSADRLTVEDRWILSRLNEVVAEVDA 632

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQK---PWELKKTNPDRASTVLYVTVEVIRQL 458
             ++    +A+  +     +   D Y +  K   P  +   +PD A T   V   V+  +
Sbjct: 633 LYEDFQFAKAMEALYHFAWDEVCDWYIELSKLRLPIGVAPDDPD-AQTARAVLGHVLDVM 691

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL   VP +   ++  L
Sbjct: 692 LRLLHPAVPYVTETLWTAL 710


>gi|170767652|ref|ZP_02902105.1| leucyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170123140|gb|EDS92071.1| leucyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|329119905|ref|ZP_08248579.1| leucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464061|gb|EGF10372.1| leucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y +N +GSK    PAD+ +   D  R  +    A L +  LP+         ++ 
Sbjct: 584 VCETYYRENANGSKDWINPADVELTFDDKGRPVS----AVLKADGLPV---------VIS 630

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             EK+SKS  N +DP ++I+  G D  R F++
Sbjct: 631 GTEKMSKSKNNGVDPQQLIDAYGADTARLFMM 662


>gi|323158904|gb|EFZ44915.1| leucyl-tRNA synthetase [Escherichia coli E128010]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYAIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|256851598|ref|ZP_05556987.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661023|ref|ZP_05861938.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282932387|ref|ZP_06337818.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256616660|gb|EEU21848.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548745|gb|EEX24720.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303501|gb|EFA95672.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   +K+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKDHDKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVIEE G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   I +     E+D S+  + ++ ++++ E+ ++   + A++Q++  V+E  
Sbjct: 629 RLFVNDLDLDPIVSDKVVEENDGSLDKIYNQTVKKVTEDFESLHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G    V  D+N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGQDPAVVTDENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   ++L  SY  D  ++T++  ++   + +++++   G  Y+      +S        +
Sbjct: 107 KKQLNMLGFSYDWDREVKTSDPNYYKWTQWVFEQMYKMGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +E+  G    G Y   + N  QWM       +++AY D+LL 
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAYADRLLE 202


>gi|269213745|ref|ZP_05982769.2| leucine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145666|gb|EEZ72084.1| leucine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 878

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|162456364|ref|YP_001618731.1| hypothetical protein sce8081 [Sorangium cellulosum 'So ce 56']
 gi|161166946|emb|CAN98251.1| metG3 [Sorangium cellulosum 'So ce 56']
          Length = 640

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 41/297 (13%)

Query: 216 WGIKIPDD--PQYI---MYVWIDALTNYLT------------TTGYLDNPDGSKAKFWPA 258
           WG+ +P D  P+     +YVW D+L   +                Y+D     +A+ +  
Sbjct: 325 WGLSLPADLDPELCGKTLYVWPDSLIAPIAFSQVALARRGVDPARYVDFWCDPEARIY-- 382

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG-----------FILHKGEKISKSL 307
               +G+D + F+ +   A  L A  P P+++ + G            +L  G+K+SKS 
Sbjct: 383 --QFLGQDNVFFYVLMQGAMWLGAQ-PDPRRLPAPGELQLTDVLGCFHLLVGGDKMSKSR 439

Query: 308 GNVIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           GN     ++++E G   D +RY+L       K   +D + L +R N  LA  +     R 
Sbjct: 440 GNFFTADQLLDEKGYSADQIRYYLALLGLAEKPSNFDFEKLDER-NRFLAGPLNAAFERP 498

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S     +DG +P  GA     + + +   R++Q     M        L ++ +    ++
Sbjct: 499 ISAAHSKFDGRVPH-GALL---DKVAADTLRIVQRYVRAMDRADYPTLLFEIENYARVIN 554

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             F   KP + +     R    L+ +  V++ L I+L  FVP   +++ + L +  E
Sbjct: 555 SLFAQFKPHDDRHPEEGR-RDALFSSFYVLKNLMIMLYPFVPTTMDRLRESLRLPPE 610



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 7/145 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQK 57
           ++   +  ++  + Y N   H+GH A   + AD+ AR+  L     +VLF  GTD+HG  
Sbjct: 18  VRRPRRAVVTAGMPYANGMLHLGHLAGAHVPADIHARWLGLVIGRENVLFVCGTDDHGSA 77

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----HHDTCRILWKKI 113
              AA+ AGV+ + F+D             DI  D +  T+         +      +++
Sbjct: 78  SQIAARQAGVSIREFIDGIHEKQHASLRRYDIDLDVYSGTSRPECLPIQQELAHRFLRRL 137

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYND 138
            D G + K   S W+    + +  D
Sbjct: 138 HDNGLLEKRTSSQWFDPELQCFLPD 162


>gi|157415352|ref|YP_001482608.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047144|sp|A8FME4|SYL_CAMJ8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157386316|gb|ABV52631.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315932229|gb|EFV11172.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 809

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|152979533|ref|YP_001345162.1| isoleucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150841256|gb|ABR75227.1| isoleucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 915

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G++A     D+++ G D  R    +  + 
Sbjct: 510 KVPD----TLDVWFDSGSTYYSVVKSRPEFNGNEA-----DMYLEGSDQHR--GWFMSSL 558

Query: 279 LLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 559 MLSTATDNQAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 619 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDAVKPEEMISLDRW 671

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +    R  +EI+E   N   H  + +++   S
Sbjct: 672 AVDCALRAQKEIKEAYDNYQFHTVVQRLMKFCS 704


>gi|88807987|ref|ZP_01123498.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788026|gb|EAR19182.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 968

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 37/282 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++   +         +A  +PADL++ G D  R  F +    +  ++   P
Sbjct: 555 MDVWFDSGSSWAAVSSQ------REALSYPADLYLEGSDQHRGWFQSSLLTSVAVNGKAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K+V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR + V  +  
Sbjct: 609 Y-KRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPFGADVLRLW-VSSVDY 666

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESI 390
             D      G+ +++ AD+   + N  SR +   L D+    P   A   +     D  +
Sbjct: 667 SAD-VPIGAGILRQI-ADVYRKVRN-TSRYLLGNLHDFS---PERDAIAVADLPLLDRWM 720

Query: 391 LSVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
           L   + V+ EI E+ +N    R   L Q   +    + Y D  K   L  + P   R  +
Sbjct: 721 LQRTAEVMDEITESFENYEFFRFFQLLQNFCVTDLSNFYLDIAKD-RLYVSAPSDQRRRS 779

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQ 487
              V   +I +LA L+   +  +A  I+  L +  +E   FQ
Sbjct: 780 CQTVMALIIERLAGLIAPVLCHMAEDIWQNLPYPVEETSVFQ 821


>gi|330938265|gb|EGH41928.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|261379368|ref|ZP_05983941.1| leucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797811|gb|EFC53158.1| leucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y +N +GSK    PAD+ +   D  R  +    A L +  LP+         ++ 
Sbjct: 584 VCETYYRENANGSKDWINPADVELTFDDKGRPVS----AVLKADGLPV---------VIS 630

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             EK+SKS  N +DP E+I   G D  R F++
Sbjct: 631 GTEKMSKSKNNGVDPQELINAYGADTARLFMM 662


>gi|308173505|ref|YP_003920210.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606369|emb|CBI42740.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553563|gb|AEB24055.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911644|gb|AEB63240.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 921

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L   G K+SKSLGN IDP ++ +++G + LR ++
Sbjct: 575 QAPY-KGVLSHGFTLDANGRKMSKSLGNTIDPTKIAKQLGAEILRLWV 621



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTKVFVDQNSRNFRDMAD 85
             +N  V  K   + +  +FR + +
Sbjct: 105 LTKNKKVNRK---EMSVADFRKLCE 126


>gi|288576165|ref|ZP_05978301.2| leucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566078|gb|EFC87638.1| leucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 878

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|88658365|ref|YP_506964.1| valyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|88599822|gb|ABD45291.1| valyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 808

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 258 ADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL     +I+R  A Y    A+  + ++P    + S   +     K+SKS GN + P +
Sbjct: 482 ADLRAQSHEIIRSWAFYTILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGNTLTPNK 541

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDY 373
           ++EE G D +RY+       G D  +  D LK  KR    L N      S+ VSM +  Y
Sbjct: 542 LLEEYGADVVRYWAANS-KLGADTTFSNDVLKLGKRFTTKLWNA-----SKFVSMFIGQY 595

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
              I         D+ ILS   +V+ +  E+  +     AL  + S   +   D Y +  
Sbjct: 596 -SEIDLQHVTETMDKWILSKLYKVIIKATESFNSFEYCIALNYIESFFWKDFCDNYLELS 654

Query: 432 KPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K     + T+     + ++    ++R+L  +L  F+P +  +I++ L+
Sbjct: 655 KKRAYGESTSKQEHLSAVHTLSFILRELLKMLAPFMPYITEEIYNTLY 702



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + Q HIGH +     D +AR+ R+ G DV +  G D++G
Sbjct: 48 SGQLHIGHVFSYCHTDFIARYQRMLGKDVFYPIGFDDNG 86


>gi|257482215|ref|ZP_05636256.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330987613|gb|EGH85716.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331011322|gb|EGH91378.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 868

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|238020722|ref|ZP_04601148.1| hypothetical protein GCWU000324_00612 [Kingella oralis ATCC 51147]
 gi|237867702|gb|EEP68708.1| hypothetical protein GCWU000324_00612 [Kingella oralis ATCC 51147]
          Length = 877

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV +RF ++ G +VL   G D  G     AA 
Sbjct: 32  KPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKMQGYNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           N  V    +   N    +     L  + D    I T    ++   ++L+ K+  KG +Y+
Sbjct: 92  NNNVAPAAWTYSNIEYMKQQLKSLGFALDWEREIATCRPEYYRWEQLLFTKLFKKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KLGTVNWDPIDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYFKITDYAEQLLN 204


>gi|237756707|ref|ZP_04585209.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691131|gb|EEP60237.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 621

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 12/111 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SA 282
           I+ VW D+  ++     Y +  +      WPAD+++ G D    H  ++ + LL    S 
Sbjct: 213 ILDVWFDSGVSHAAVLKYGEWEELR----WPADMYLEGSDQ---HRGWFQSSLLESVASY 265

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           N      V +HGF L  KG K+SKS GNV+ P +VI+E G D LR ++V E
Sbjct: 266 NRAPYDTVLTHGFTLDEKGRKMSKSAGNVVAPEKVIKEYGADILRLWVVTE 316


>gi|83720304|ref|YP_441326.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618175|ref|ZP_02386806.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767710|sp|Q2T0H3|SYI_BURTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83654129|gb|ABC38192.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 945

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPAE-QWLEIDRYAVAFSAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +    + +++    A T LY VT 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASKARRS----AQTALYHVTQ 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A ++F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|311280454|ref|YP_003942685.1| leucyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749649|gb|ADO49401.1| leucyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 860

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T    ++   +  + ++  KG +YK
Sbjct: 92  KNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 152 KTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|307299268|ref|ZP_07579069.1| valyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915064|gb|EFN45450.1| valyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 867

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 32/270 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +     TT G+ +  +  ++ F+P  + V   DI+ F    W A ++ A    
Sbjct: 446 VLDTWFSSQLWPFTTLGWPEKTEDLES-FYPTSVLVTAFDIIFF----WVARMIMAGYHF 500

Query: 286 LPKKVFSHGFILH-----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338
           + +K F+H +I        G K+SKSLGN IDP++VI E G DA+R+ L    A   D  
Sbjct: 501 MGEKPFNHVYITRLIRDKNGRKMSKSLGNGIDPLDVIRENGTDAMRFTLAILAAQNHDIK 560

Query: 339 ---GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
               F+D       +    AN I N  +R   + ++ ++ +          D  ILS  +
Sbjct: 561 LDVRFFD-------IYKKFANKIWN-AARFALLNMEGFEKVNLDEEELAIEDRWILSRLA 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR--ASTVLYVT 451
           + ++ + E++       A   + S       D Y ++ KP  L +    R  A  VL  T
Sbjct: 613 KSVKAVEESIDGYDFPSASKMIYSFFWNEFCDWYIESTKP-RLNREGRSRIVAQNVLVRT 671

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++   +   +L  F+P +  +++  L  +D
Sbjct: 672 LDASLR---MLHPFMPYITEELWQNLPGSD 698



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           +  I  PN  A  H+GHA  ++I D++ RF R+ G   L+  G D  G        + +A
Sbjct: 37  TIMIPPPNITAPLHMGHALNLVIQDIIIRFKRMKGYRALWVPGEDHAGIATQNAVEKDLA 96

Query: 60  KAAQNAG--------VTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRI 108
           K   N           TT  +  +  +  R+  + +  S  D+ R   T ++   +  R 
Sbjct: 97  KKGTNRKELGRERFLETTWNWAKEYRQRIREQIEAMGCSV-DWSRERFTMDEGLSEAVRK 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            +  +  +G IY+G Y   +  R     +D+EV ++   G +Y+ ++
Sbjct: 156 AFVMLYKEGLIYRGKYIVNWCPRCSTVLSDEEVEHEDEKGAFYHIKY 202


>gi|254804285|ref|YP_003082506.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667827|emb|CBA03822.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 878

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|145607167|ref|XP_361568.2| hypothetical protein MGG_04042 [Magnaporthe oryzae 70-15]
 gi|145014765|gb|EDJ99333.1| hypothetical protein MGG_04042 [Magnaporthe oryzae 70-15]
          Length = 917

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 5/172 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IADV+ARF  L G  V+   G D  G     AA   G+
Sbjct: 44  YVLPMFPYPSGYLHLGHLRVYTIADVIARFRTLQGNKVMLPMGWDAFGLPAENAAIERGI 103

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              V+   N    ++  DV++ S+D    I T +   +   + ++  + +KG  Y+    
Sbjct: 104 DPAVWTKSNIARMKEQLDVMNSSWDWSREISTCDPEFYKHTQKIFLLMHEKGLAYQAEAE 163

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y   D+    +++V   A+G  + +    V+      +F ++S +++ LL
Sbjct: 164 VNYDPVDKTVLANEQV--DANGCSWRSGAK-VEKRRLRQWFLKISEFREPLL 212


>gi|16127979|ref|NP_422543.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236801|ref|YP_002519238.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|32171583|sp|Q9A217|SYL_CAUCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782490|sp|B8GW27|SYL_CAUCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13425523|gb|AAK25711.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965974|gb|ACL97330.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 861

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 12/179 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  RPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFNVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV  K +   N    R+    L IS D   +F  T +  ++   +  + ++  +G +Y
Sbjct: 92  ERGVHPKGWTYDNIAAMREQLKSLGISVDWSREFA-TCDPEYYGKQQAWFLRLLKRGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   S  +   D     +++V   KG        +    QW      F R++ Y D L+
Sbjct: 151 RKEASVNWDPVDMTVLANEQVIDGKGWRSGAVVEKRKLTQW------FLRITDYADALI 203



 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 29/178 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P ++ E  GVD+ R F++ +    +D  +   G++             
Sbjct: 622 EKMSKSKKNVVAPEDIFEAYGVDSARLFVMSDSPPERDVQWTNSGVEGSW---------- 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
              R    +  ++D       A  +SDE+ L++     +++  + ++++    +  +A++
Sbjct: 672 ---RFTHRLWNEFDSQPAGDFAHDDSDEAALALRKAAHKLIGFVTDSIEGFRFNSGVARL 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++             LK    + AS  VL    E +  LA L+  F P LA + +
Sbjct: 729 YEFLN------------ALKAAPAEGASQAVLAARAEALNILARLVAPFTPHLAEEAW 774


>gi|330887935|gb|EGH20596.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 497

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|326803764|ref|YP_004321582.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651632|gb|AEA01815.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 927

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 31/270 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L   D      +PAD+++ G D  R  F++    +  ++ + 
Sbjct: 523 IMDVWFDSGSSW---AGVLQTRDELS---YPADMYLEGSDQYRGWFNSSLLTSVAVNDHA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  K+V S GF+   +G K+SKSLGN + P +V ++ G D LR ++       ++    D
Sbjct: 577 PY-KEVVSQGFVNDGEGRKMSKSLGNTVSPNDVCDQRGADILRLWVASVDSRYDVRISDD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                    +++   L   +GNL           YD +          D+ IL + + ++
Sbjct: 636 ILGQVAESYRKIRNTLRFTLGNLFDFDAKENYVAYDDL-------DSIDQYILVLLNELV 688

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQK--PWELKKTNPDRAS--TVLYVTV 452
             + +   +   +    ++I+ +++V    Y D  K   + L   +P R +  TV+Y   
Sbjct: 689 DHVIDYYNHYDFNSIYQEIINFLTQVMSSFYLDYSKDVTYILLADDPKRRNMQTVMY--- 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482
           EV++++ ILL   +P    +I+  +  A++
Sbjct: 746 EVLKKMTILLTPIIPHTTEEIWSYMGEAED 775



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E   +     Y N   HIGHA   I  D++ R   + G    +  G D HG  I +A
Sbjct: 45  KDNEPFVLHDGPPYANGNIHIGHALNKITKDIIVRSKNMQGYYSPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVF----------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
             N+GV  K                  +D   ++F+ +    D   D +I  T+K     
Sbjct: 105 VTNSGVDRKSMSTAEFRQICQDYASQQIDSQRQDFKRLGGQGDWE-DPYITYTKKFEAQE 163

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R+   +++ KG IY+G    ++S   E+   + E+
Sbjct: 164 IRVF-GEMAKKGLIYRGNKPVYWSPSSESTLAEAEI 198


>gi|323343130|ref|ZP_08083361.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463194|gb|EFY08389.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 800

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 3/118 (2%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y+     YP+    H+GH       DV+AR+ R++G +VL   G D  G    + A  
Sbjct: 32  KYYVLDMFPYPSGNGLHVGHPRGYTATDVIARYKRMNGFNVLHPMGWDAFGLPAEQFALK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            G     F  QN  +F D    L +SYD    I TT+  ++   + ++ K+ D G  Y
Sbjct: 92  TGNHPNEFTKQNIAHFTDQIKSLGLSYDWSREISTTDPGYYKWTQWIFTKLYDMGLAY 149



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 37/186 (19%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILH-KGEKIS 304
           K W P DL++ G +    H +Y   W   L    +   K    K++  G IL    EK+S
Sbjct: 518 KHWMPVDLYMGGSEHAVLHLLYARFWHKVLFDLGVVDTKEPFGKLYHQGMILGANNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P +++E  G DALR +      L   IA    G    DG++K ++       
Sbjct: 578 KSRGNVVNPDDIVESHGADALRVYEMFMGPLDGAIAWSTRGL---DGIRKWLD------- 627

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                       + Y  M+ +      +D S+  V ++ +Q++  +++   ++ A++Q++
Sbjct: 628 ------------RVYRLMVESDKISETNDGSLDFVYNQTVQKVTHDIETFGMNTAISQLM 675

Query: 419 SLVSEV 424
             V+E 
Sbjct: 676 IFVNEA 681


>gi|89097578|ref|ZP_01170467.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89087874|gb|EAR66986.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 1021

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 26/262 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ +       Y        ++ +PAD  + G D  R  F+++   + L    L
Sbjct: 506 VIDVWFDSGSMPYAQLHYPFEHKEEFSRLFPADAVIEGVDQTRGWFYSLLAVSVLYKGQL 565

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   G+K+SKS GN +DP ++I E G DALR+ LV + +  K       
Sbjct: 566 PYKNVLALEHVLDENGQKMSKSKGNALDPAKLITEFGADALRWALVEDSSPWKP------ 619

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGMIPTPGAFTES--DESILSVCSRV 397
             KK    + A     LV    S+     +    D   P     + +  D  ILS    V
Sbjct: 620 --KKFSGKNAAEAKSKLVDSLASIHHFYSLYSTIDHFEPDSSQTSGNIMDRWILSRLHSV 677

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAST--VLYVTV 452
           ++ + + M +     A     +L+ EV  ++   + ++ W  K    D+ S    LY  +
Sbjct: 678 IETVNKEMGSYQATNAARAAGTLIEEVSNWYIRRNRERFW-AKGMEDDKISAFQTLYTLL 736

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
           + I +   +L  FVP +A  ++
Sbjct: 737 DNISR---MLAPFVPFIAESVY 755



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTK----- 70
           N  PH GHA      D+ AR+  + G  V+   G D HG  +    + A G++ K     
Sbjct: 44  NGLPHAGHALGRTYKDLTARYWTMKGRQVIRKAGWDTHGLPVELGVEKALGISGKKEIED 103

Query: 71  ----VFVD-------QNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                F++       Q  + +R+  + L      DD   T    + ++   +   I +KG
Sbjct: 104 YGVGAFIEKCRESVFQYEKQWREFTEQLGYWTDMDDPYMTLSNEYIESVWHILGTIHEKG 163

Query: 118 DIYKG 122
            +YKG
Sbjct: 164 LLYKG 168


>gi|68171281|ref|ZP_00544682.1| Aminoacyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999296|gb|EAM85944.1| Aminoacyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 808

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 258 ADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL     +I+R  A Y    A+  + ++P    + S   +     K+SKS GN + P +
Sbjct: 482 ADLRAQSHEIIRSWAFYTILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGNTLTPNK 541

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDY 373
           ++EE G D +RY+       G D  +  D LK  KR    L N      S+ VSM +  Y
Sbjct: 542 LLEEYGADVVRYWAANS-KLGADTTFSNDVLKLGKRFTTKLWNA-----SKFVSMFIGQY 595

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
              I         D+ ILS   +V+ +  E+  +     AL  + S   +   D Y +  
Sbjct: 596 -SEIDLQHVTETMDKWILSKLYKVIIKATESFNSFEYCIALNYIESFFWKDFCDNYLELS 654

Query: 432 KPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K     + T+     + ++    ++R+L  +L  F+P +  +I++ L+
Sbjct: 655 KKRAYGESTSKQEHLSAVHTLSFILRELLKMLAPFMPYITEEIYNTLY 702



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + Q HIGH +     D +AR+ R+ G DV +  G D++G
Sbjct: 48 SGQLHIGHVFSYCHTDFIARYQRMLGKDVFYPIGFDDNG 86


>gi|195491875|ref|XP_002093751.1| GE21469 [Drosophila yakuba]
 gi|194179852|gb|EDW93463.1| GE21469 [Drosophila yakuba]
          Length = 869

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 75/190 (39%), Gaps = 25/190 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA 
Sbjct: 61  QDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN    ++    L  S+D    + T   +++   + L+  +   G  Y+
Sbjct: 121 QRGVEPASWTKQNISQMKEQLQRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W             +F R SA
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLRQWFIRTSA 227

Query: 172 YQDKLLSYYE 181
           Y  +LL   E
Sbjct: 228 YAKQLLDGLE 237


>gi|313895895|ref|ZP_07829449.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975320|gb|EFR40781.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 843

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 8/184 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 51  KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMAGYNVLHPMGFDSFGMPAENAAI 110

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N +     + +SY  D  + T  + ++   + +++    KG  YK
Sbjct: 111 KNNVHPAAWTYANIENMKRQQRAMGLSYDWDREVVTCREDYYRWTQWIFELFYKKGLAYK 170

Query: 122 GCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              S  W         N+    +  DG+ +  + + VQ      +FF+++ Y D+LL+  
Sbjct: 171 KEASVNWCDTCGTVLANE----QVEDGKCWRCK-SEVQKKNLAQWFFKITDYADELLADL 225

Query: 181 ESHP 184
           +  P
Sbjct: 226 DKLP 229



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 103/248 (41%), Gaps = 41/248 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D     +W P D ++ G +    H +Y   F        +L  + P    + + G ++  
Sbjct: 541 DRDAVNYWAPVDQYIGGIEHAILHLLYARFFTKVLRDTEMLDFDEPF-TNLLTQGMVIKD 599

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+ P E+I+  G D  R F++      +D  +   G++         G  
Sbjct: 600 GAKMSKSLGNVVSPEEIIDRYGADTARLFILFAAPVERDLDWSDQGVE---------GAF 650

Query: 360 NLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQ-LIHR 412
             +SR V  IL  ++  I +          +  +  +  V    ++++ E+++++ + + 
Sbjct: 651 RFLSR-VWRILGQFEETIRSASDAYDTDTLSTEETELRRVLHSTVKKVTEDVRDRFMFNT 709

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A++ V+ LV+    + D       +  +P  A        E    L  +L  F P +  +
Sbjct: 710 AISSVMELVNAFYAFQD-------RALHPGLAR-------EAASALVRMLAPFAPHITAE 755

Query: 473 IFDILFVA 480
           ++  LF  
Sbjct: 756 LWSRLFTG 763


>gi|311113761|ref|YP_003984983.1| valyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
 gi|310945255|gb|ADP41549.1| valyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
          Length = 910

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++  W  +       TG+  +P+   AK +P DL   G DI+R    +    A  L++++
Sbjct: 524 VLDTWATSSLTPQIATGWATDPE-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETLASSV 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P +V+++ G DA+RY+       G D  YD+ 
Sbjct: 583 PWYNTALSGWILDPDRKKMSKSKGNVVVPHDVLDKYGSDAVRYWAA-SARLGADTAYDEG 641

Query: 345 GLK--KRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +K  +R+   L N    + NL +   S+I     G + T       D S+L   + +++
Sbjct: 642 QMKIGRRLAIKLLNASKFVLNLGATEKSVITSQSQGQVLT----NALDRSLLVRLAYLIE 697

Query: 400 EIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           E     +     RAL    S   S  D + +  K            ++VL      +  L
Sbjct: 698 EATAAFEKYEYARALQIAESFFWSFTDDFVELIKDRAYGARGETEQASVLAALATTLDAL 757

Query: 459 AILLQAFVPKLANKIF 474
             L   F+P +  +I+
Sbjct: 758 LRLFAPFLPFVTEEIW 773



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REHVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMSGKNVFYPLGWDDNGLPTERRV 106

Query: 63  QN 64
           QN
Sbjct: 107 QN 108


>gi|260434590|ref|ZP_05788560.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412464|gb|EEX05760.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 974

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       DN        +PADL++ G D  R  F +    +  ++ + P
Sbjct: 556 MDVWFDSGSSWAAVASQRDNLS------YPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 609

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             K+V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR ++
Sbjct: 610 Y-KRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRLWV 662


>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 946

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 117/269 (43%), Gaps = 28/269 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  +Y          +  +    PADL++ G D  R  F +    A       
Sbjct: 545 ILDVWFDSGVSYAAVL------EQRRELQSPADLYLEGSDQHRGWFQSALLAAVGTRGTA 598

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF++  KG+K+SKS+GNVI P ++IE+ G + LR +   E    +D     
Sbjct: 599 PY-KAVLTHGFVVDGKGKKMSKSIGNVIAPGQIIEKHGAEILRLWAASEDY--RDDIRIS 655

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D + K++ AD    I N V R +   L D+D   P      E DE    + +R  ++++E
Sbjct: 656 DNILKQL-ADAYRKIRNTV-RFLLGNLHDFDPTAPGAPPEAEMDELDRWILAR-FEQLKE 712

Query: 404 NMQNQLIHRALAQV------ISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLYVTVE 453
             +         QV         VS    Y D  K   + +   +P R  A  V+Y   E
Sbjct: 713 KTRTGYDSFEFHQVYHGLYNFCTVSLSALYLDIVKDRLYTMPADHPQRRAAQAVMY---E 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           +   L  LL   +  LA + ++ L V  E
Sbjct: 770 ICDGLLRLLAPILSFLAAEAWEYLPVDQE 798


>gi|240114857|ref|ZP_04728919.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|260441328|ref|ZP_05795144.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|240013321|ref|ZP_04720234.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120392|ref|ZP_04733354.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|189030334|sp|Q5FAJ3|SYL_NEIG1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|66802566|ref|XP_635155.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996551|sp|Q54ET5|SYLM_DICDI RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=LeuRM; AltName: Full=Leucine--tRNA ligase; Flags:
           Precursor
 gi|60463472|gb|EAL61657.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 940

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K Y  +   YP+   H+GH     I+D +AR  R+ G DV+   G D  G     AA
Sbjct: 43  DNNKFYSLSQFPYPSGALHMGHVRVYTISDCIARLKRMQGYDVIHPMGWDAFGLPAENAA 102

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V+   + + N  + RD   +L+  +  D  + T  K ++   + ++ ++   G  Y
Sbjct: 103 IDKQVSPSEWTNLNISSMRDQLKLLNFQFDWDRELSTCNKEYYRWTQEIFLRLLKSGLAY 162

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL 176
           +   +  +   D+    +++V    D Q  + + N  V+  E + +F+++++  D+L
Sbjct: 163 RKSATVNWDPIDQTVLANEQV----DAQGRSWRSNAIVEKKEMKQWFYKITSMADRL 215


>gi|269114822|ref|YP_003302585.1| Valyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322447|emb|CAX37182.1| Valyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 839

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 51/352 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ + +  +F ++S +   LL    S     +   R    +        D ++SR+ + 
Sbjct: 346 PIEILVQPQWFVKMSEFSKMLLKDLRSDEGVKIFPPRFESTLENWMENAHDWTISRQIW- 404

Query: 216 WGIKIPD--DPQYIMYVWI-----------DALTNYLTTT----GYLDNP-DGSKAK-FW 256
           WG +IP   + Q  + V I           D L  + ++      +L  P D SK K ++
Sbjct: 405 WGHRIPAWYNEQNEIKVQIQKPEGNWKQDDDVLDTWFSSGLAPFVFLGWPQDKSKLKRYF 464

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLP-LPKKVFSHGFILH------KGEKISKSLGN 309
           P  L V G DI+ F    W A +   +L  + +K F H  +LH      +G K+SKSLGN
Sbjct: 465 PTSLLVTGYDIIFF----WVARMYFFSLYFMDQKPFEH-LLLHGLVRDSQGRKMSKSLGN 519

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL-ANGIGNLVSRSVSM 368
            I+PI+VI+E G D LR  L+     G D  Y  + ++    A L AN   N     ++ 
Sbjct: 520 GINPIQVIDEYGSDVLRMSLIFNCTPGLDINYSDEKIQ---GAKLFANKFWN-----IAR 571

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +++    I     F + DE    + +  L   ++N+++ +    L  +   + +  VD+
Sbjct: 572 FVENIPVSITEKIDFNKLDEYDNWILNEYLT-FKKNIEDAMDKYELTIIYKHIQDFVVDK 630

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + +    W L+       S +++    + +Q+ ILL  F+P L + +F+ L+
Sbjct: 631 FSN----WYLEFLKFKENSYLIHY---LFKQILILLHPFMPFLTDYVFEKLY 675



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  I+D + RF +L G DVL+  GTD  G  IA  A    V  K    QN   +
Sbjct: 48  HIGHALDNYISDTIIRFKKLQGYDVLWLPGTDHAG--IATQA----VVEKKLASQNINKY 101

Query: 81  R 81
           +
Sbjct: 102 Q 102


>gi|172058284|ref|YP_001814744.1| leucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559918|sp|B1YKH4|SYL_EXIS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171990805|gb|ACB61727.1| leucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 801

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 9/180 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E  Y      YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  EKEGFYALDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN   F+     L  SY  D  I TT+ +++   + ++ K+ ++G  
Sbjct: 89  ALDTGNDPREFTAQNIETFKRQLKDLGFSYDWDREINTTDPKYYKWTQWIFTKLYEQGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +       W         N++ +    DG      H PV  +    +  +++ Y D+LL 
Sbjct: 149 FVDEVAVNWCPALGTVLANEEVI----DGLSERGNH-PVVRVPMRQWVLKITEYADRLLE 203



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 23/187 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K+W P D+++ G +    H +Y   W   L    +   K    K+++ G IL   
Sbjct: 514 DPEKLKYWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQKLYNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P E+++  G D LR + +          + ++GL         +G  
Sbjct: 574 NEKMSKSRGNVINPDEIVKSHGADTLRLYEMFMGPLDASVSWSENGL---------DGAR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +  +  D         T  D     V  + ++++ E+  N   +  ++Q++ 
Sbjct: 625 RFLDRVWRLFERTADIQ-----DVTTVDADFERVYHQTVKKVTEDFTNIQFNTGISQLMV 679

Query: 420 LVSEVDR 426
            V+E ++
Sbjct: 680 FVNEANK 686


>gi|268600513|ref|ZP_06134680.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044687|ref|ZP_06570396.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268584644|gb|EEZ49320.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291011581|gb|EFE03577.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 878

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|322421576|ref|YP_004200799.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127963|gb|ADW15523.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 925

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++       DN  GS     PAD+++ G D  R  FH+    +       
Sbjct: 531 ILDVWFDSGTSHAAVLELRDNL-GS-----PADMYLEGSDQHRGWFHSSLLASVGTRGRA 584

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF++   G K+SKS+GNV+ P +VI++ G D LR ++  +
Sbjct: 585 PY-KNVLTHGFVMDGAGRKMSKSVGNVVAPEDVIKKFGADVLRLWVAAQ 632



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K++ +  +     Y N   HIGHA   I+ D++ +  R+DG    +  G D HG  I
Sbjct: 45  KDKPRYVLHDGPPYANGHIHIGHALNKILKDIVLKSKRMDGFAAPYVPGWDCHGLPI 101


>gi|154509318|ref|ZP_02044960.1| hypothetical protein ACTODO_01843 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798952|gb|EDN81372.1| hypothetical protein ACTODO_01843 [Actinomyces odontolyticus ATCC
           17982]
          Length = 903

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 20/197 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           IM  W  +  +     G+LD+ D   A+ +P DL   G+DI+R       + ++ ANL  
Sbjct: 539 IMDTWATSSLSPQLACGWLDDED-LFARTYPMDLRPQGQDIIRTWLF---STVVRANLEF 594

Query: 287 PKKVFSH----GFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               + H    G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D 
Sbjct: 595 GALPWKHAGLSGWILDSDHK--KMSKSKGNVVTPMGILEKYGSDAVRYWAA-SARLGLDA 651

Query: 340 FYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +D+  +K  +R+   + N     ++        D D  + T       D S+L+  + V
Sbjct: 652 AFDEQQMKIGRRLAIKVLNASKFALTMGGEGAAIDLDPALVT----VPLDRSVLAALASV 707

Query: 398 LQEIRENMQNQLIHRAL 414
           + E    + +    RAL
Sbjct: 708 IDEASAALASYEHSRAL 724



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   HIGH +     DV+AR+ R+ G  V +  G D++G    +  
Sbjct: 43  REQVYSIDTPPPTVSGSLHIGHVFSYTHTDVVARYQRMTGKSVFYPMGWDDNGLPTERRV 102

Query: 63  QN 64
           QN
Sbjct: 103 QN 104


>gi|84028269|sp|Q9XDB4|SYI_FERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 912

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 10/136 (7%)

Query: 251 SKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSL 307
           SK + +P DL++ G D  R  F +  + +   +   P  K V +HGFI   +G K+SKSL
Sbjct: 537 SKGERFPVDLYLEGDDQHRGWFQSSIFLSTAKAGTAPF-KAVVTHGFIKDEQGRKMSKSL 595

Query: 308 GNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           GNVIDP+E++ + G D LR ++        I  GK+    +  + +++   L   + NL 
Sbjct: 596 GNVIDPMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLY 655

Query: 363 SRSVSMILKDYDGMIP 378
             + + +L  Y+ ++P
Sbjct: 656 DFTEADLLP-YEKLLP 670


>gi|84515044|ref|ZP_01002407.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511203|gb|EAQ07657.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 843

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDI 119
             +G   K +  QN  + R     L +S  D+ R   T +  ++   + L+     KG I
Sbjct: 90  MASGGHPKDWTYQNIADMRAQMKPLGLSI-DWTREFATCDPEYYGQQQALFIDFLSKGLI 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  +      N+  +    DG+ + +  + V+  E   +FF++S Y ++LL+
Sbjct: 149 YRKKAVVNWDPVDMTVLANEQVI----DGKGWRSGAD-VERRELVQWFFKISDYSEELLA 203


>gi|99034168|ref|ZP_01314255.1| hypothetical protein Wendoof_01000951 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 439

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 17/223 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLG 308
           K W      I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L 
Sbjct: 127 KEWFESADFITEYIAQTRGWFYTLFVLSTALFNREPF-KNCICHGVVLDVKGQKLSKRLN 185

Query: 309 NVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKR-VNADLANGIGNLVSRSV 366
           N  DP+EV +  G DALR+ ++   I CG +   DK+G   R V  ++   I N  S   
Sbjct: 186 NYADPMEVFDRYGSDALRFLMLSGSIICGGNLLLDKEGNSIRDVLKNVIKPIWN--SYHF 243

Query: 367 SMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +  + DG+        +S  D  ++S C   ++ I+ +M +     A   +I     +
Sbjct: 244 FTMYANADGIKAEVCKDYQSTIDRYMISKCFEAVESIQASMNSYSSQEACKILIDFFEVL 303

Query: 425 DRYFDAQKPWELKKTNPDRAST----VLY-VTVEVIRQLAILL 462
           + ++  +      K++ D   T    VLY V   ++R  A LL
Sbjct: 304 NNWYIRRSRERFWKSDLDHDKTDAYNVLYTVFYYILRAAAPLL 346


>gi|300811526|ref|ZP_07092017.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497493|gb|EFK32524.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 804

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D+LR + +          +D +G          +G+   + R  
Sbjct: 578 RGNVVNPDDVVDEYGADSLRTYEMFMGPLNASIDWDDNG---------PSGVKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              + D D   IP+     ++D  +  + +  ++ + E+ +    + A++Q++  ++   
Sbjct: 629 RTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVKTVTEHFEELHFNTAISQMMVFMNACQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKG 122
           Y+ 
Sbjct: 148 YEA 150


>gi|330895573|gb|EGH27881.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 868

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|329765740|ref|ZP_08257309.1| leucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137806|gb|EGG42073.1| leucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 959

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/228 (20%), Positives = 104/228 (45%), Gaps = 27/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS--ANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           F+P D    G+D++  H  +   F+L+  A  P    PK++  +G +L  G K+SKS+GN
Sbjct: 577 FYPVDSRHSGRDLVPNHLTF---FVLNHVAIFPESNWPKEIVVNGSVLMNGSKMSKSMGN 633

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +I   + I++ G D +R  ++      +D  ++ + +     + + N + +L +    + 
Sbjct: 634 IIPLRKAIQDYGADPIRLAIIISAELLQDADFNMESV-----SGIQNKLESLFNECSRLK 688

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            +  D +          D+ ILS   R++ ++  +++   +  AL  ++         F+
Sbjct: 689 AEKIDTL-------EAEDKWILSKTQRLVSQVTGSIEKMRLREALHDILF-------SFE 734

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   W  K+ N    + +  +  ++      +L  F P +A ++++ L
Sbjct: 735 SDLSWYTKRVNAKSRTNISCILHQINSVRVAMLSPFAPHIAEEMWEKL 782



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK +I+ A  YPN+  HIGH     +ADV ARF+R+ G +VLF       G  I   A
Sbjct: 28  DKEKKFITVAYPYPNSPQHIGHGRTYTLADVHARFYRMKGYNVLFPMAFHYTGTPILGMA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +      K  ++    N +++  V + S   F+ 
Sbjct: 88  KRVEANDKEIIE----NLKNLYGVPEESIKTFVE 117


>gi|297250326|ref|ZP_06864102.2| leucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839199|gb|EFH23137.1| leucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 878

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KHNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|148243311|ref|YP_001228468.1| isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851621|emb|CAK29115.1| Isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 959

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L+    +   + PADL++ G D  R  F +    +  ++   P
Sbjct: 536 MDVWFDSGSSWAGVLGGLEAEADTSLNY-PADLYLEGSDQHRGWFQSSLLTSVAVNGKAP 594

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             K+V +HGF L  KG K+SKSLGNV+DP  ++E           G D LR ++
Sbjct: 595 Y-KRVLTHGFTLDEKGRKMSKSLGNVVDPAVIVEGGKNQKQEPPYGADVLRLWV 647


>gi|116070546|ref|ZP_01467815.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
 gi|116065951|gb|EAU71708.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
          Length = 884

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    +    + D
Sbjct: 70  YPSGSLHMGHVRNYVITDVIARVQRMRGDSVLHPMGWDAFGLPAENAAIERNIDPGEWTD 129

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIYKGCYSGWYSLR 131
           +N    RD  D L +S  D+ R     H D  R    L+ ++ D G  Y+   +  +   
Sbjct: 130 RNIDQMRDQLDRLGLSI-DWDREQATCHSDYYRWTQWLFLELFDGGLAYRKNATVNWDPV 188

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           D+    +++V   ADG+ + +    V+  +   +F R++ Y + LL+
Sbjct: 189 DQTVLANEQV--DADGRSWRSGAL-VEQRQLNQWFLRITDYAEALLN 232


>gi|113460332|ref|YP_718393.1| isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945180|sp|Q0I1V8|SYI_HAES1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112822375|gb|ABI24464.1| Isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 937

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 55/299 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYASVVEQRPEFNGKST-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 575 MLSTATNNKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+  + N  G+   R   +   +L + +G  P      P      
Sbjct: 635 TGEIA----------VSHKILNSAGDTYRRIRNTARFLLANLNGFDPKNDLVNPEEMISL 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYF-----DAQKPWELKKTN 440
           D   +S       EI+E   N   H  + +++   S E+  ++     D Q   +     
Sbjct: 685 DRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 744

Query: 441 PDRASTVLY-VTVEVIRQLAILLQ-------AFVPKLANK--------IFDILFVADEN 483
                T L+ ++  ++R +A +L         ++PKL N+         +D LF  DE+
Sbjct: 745 RRSCQTALWHISEALVRWIAPILSFTADEIWGYLPKLDNRAEFVFTEEFYDGLFGLDES 803


>gi|326403977|ref|YP_004284059.1| valyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050839|dbj|BAJ81177.1| valyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 891

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+ +N      +++P D+ V G DI+     +W A ++      
Sbjct: 463 VLDTWFSSALWPFSTLGWPENTP-ELDRYYPGDVLVTGFDII----FFWVARMIMMGMYA 517

Query: 282 -ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  + V  +G +   +G+K+SK+ GNVIDP+ +I++ G DALRY ++ +   G++
Sbjct: 518 MGDVPF-RTVMINGLVRDERGQKMSKTKGNVIDPLALIDQFGADALRYTVIAQSGAGRN 575



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 13/75 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA  M + DVL R HR++G D L+  GTD           +AG+ T++ V++  +  
Sbjct: 50  HVGHALTMTLQDVLIRHHRMNGRDALWQPGTD-----------HAGIATQLMVERELQ-- 96

Query: 81  RDMADVLDISYDDFI 95
           R+     +I  D F+
Sbjct: 97  REGTSRQEIGRDAFL 111


>gi|167561854|ref|ZP_02354770.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 945

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGCAPY- 606

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-SEWLEIDRYAVAFAAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY VT 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASNARRS----AQTALYHVTQ 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A ++F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|59800478|ref|YP_207190.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|293397791|ref|ZP_06641997.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|59717373|gb|AAW88778.1| putative leucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|291611737|gb|EFF40806.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 878

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|329766498|ref|ZP_08258042.1| valyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137097|gb|EGG41389.1| valyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 773

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 24/182 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288
            W+D+  + L  + Y  N D     K +P  +    KDI+R    Y    LL       K
Sbjct: 458 TWMDSSVSPLFVSKY--NKDQKFFNKVYPTSIRPQAKDIVRTWLYY---TLLRCEQLTGK 512

Query: 289 KVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           K +S  +++      KG K+SKS GN IDP+ VIE+ G D  R++   EI  G D     
Sbjct: 513 KPWSEAWVMGYGLDEKGMKMSKSKGNAIDPLPVIEQFGADTFRFWSASEINHGYDF---- 568

Query: 344 DGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                R N          +S+  +VS  L  +   +   G  TE+D+ IL+    +++E 
Sbjct: 569 -----RCNEQKIESTKKFLSKLWNVSRFLSSFP--VIESGIPTETDKWILAELDNLIKEC 621

Query: 402 RE 403
           ++
Sbjct: 622 KK 623


>gi|307720508|ref|YP_003891648.1| leucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978601|gb|ADN08636.1| leucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 823

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 18/182 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI +   +P+ + H+GH     I+D  AR+HR  G +VL   G D  G     AA 
Sbjct: 30  KEKKYILSMFPFPSGRLHMGHVRNYSISDAFARYHRQQGKNVLHPIGFDSFGMPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS--------D 115
             G   K +   N    ++    L  S+      + KR   T   L+ K          +
Sbjct: 90  KNGSHPKSWTYDNIDYMKNEFYSLGFSF------SRKREFATSDELYTKFEQGFIIDMYN 143

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG +Y+      +   D+    +++V    DG  +     P+   +   Y+F+++AY D+
Sbjct: 144 KGLLYREKGMLNWCPHDQTVLANEQV---VDGCCWRCD-TPIVKKDMNQYYFKITAYADE 199

Query: 176 LL 177
           LL
Sbjct: 200 LL 201



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++ + G +L  G K+SKS GN +DP  +IE+ G D  R F++
Sbjct: 577 ERLLTQGMVLKDGAKMSKSKGNTVDPDAIIEKYGADTARLFIL 619


>gi|292657053|ref|YP_003536950.1| valyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372246|gb|ADE04473.1| valyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 870

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 28/269 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGS-----KAKFWPADLHVIGKDILRF---HAIYWPAFLLS 281
            W  +    L   G+  NP+       + + +P D+   G DI+ F   H +    +  +
Sbjct: 459 TWATSSLTPLINAGWDWNPETEAMELDRPELYPFDMRPQGHDIISFWLFHTVV-KCYEHT 517

Query: 282 ANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +P    V  +G +L +  EK+SKS+GNV+ P EV+E+  VDA RY+     A G D  
Sbjct: 518 GEVPF-DSVMINGMVLDENREKMSKSVGNVVSPDEVLEKFPVDAARYWAAGS-AVGDDLP 575

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCS 395
           Y + GL       L   + N  S+ V  + +D       P  F        D  +L+   
Sbjct: 576 YQEKGLV--AGEKLMRKLWN-ASKLVESLTED------APAEFDHDDLKAIDRWLLASLD 626

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R L+ + E ++N+   +A  ++ S    +  D Y +  K    +  +P  A T+      
Sbjct: 627 RELEFVTEKLENREFSKARDRLRSFFWHTFCDDYLEIAKQRVREGDDPSAAYTLQTAHKR 686

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
            +   A +L     +L   ++D   V D+
Sbjct: 687 FLACFAPILAHVTEELWRDMYDEASVHDQ 715


>gi|184153233|ref|YP_001841574.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|254782415|sp|B2G6L2|SYI_LACRJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|183224577|dbj|BAG25094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 931

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PADL++ G D  R  F++    + + S
Sbjct: 525 IMDVWFDSGSSHQGVLAERDYLT---------YPADLYLEGSDQYRGWFNSSLITSVVCS 575

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K++ S GF L K G K+SKS GNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVM 624



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      +G   K    
Sbjct: 58  YANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKM-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FRD+     +   D  RT  KR
Sbjct: 116 -SLTEFRDLCREYALKQVDKQRTDFKR 141


>gi|110597076|ref|ZP_01385365.1| leucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341267|gb|EAT59732.1| leucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 819

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH      +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 39  DKPKYYVLDMFPYPSGSGLHVGHLEGYTASDITARYKRSCGFNVLHPMGWDAFGLPAEQF 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  +QN R+F++    +  SYD    I TT+  +    + ++ ++ + G  
Sbjct: 99  AIKTGTHPRITTEQNIRSFKETLQAMGFSYDWSREINTTDPGYFKWTQWIFLRLYEMGLA 158

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++   K ADG  Y     P+ QW+       +++AY ++L+
Sbjct: 159 YMSEVDVNWCEELKTVLANEEVEEKIADG--YTVIRRPLRQWV------LKITAYAERLI 210

Query: 178 S 178
           +
Sbjct: 211 A 211



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 43/240 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K ++W   DL++ G +    H +Y   W   L     +S   P  +K+F+ G IL +
Sbjct: 524 DPEKERYWMNVDLYIGGAEHAVLHLLYARFWHKVLFDLGVVSTREPF-RKLFNQGMILGE 582

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V+E  G DA+R +         + F       K  N +   GI
Sbjct: 583 DNEKMSKSRGNVIPADHVLERYGADAVRLY---------EMFLGPLEQVKPWNTNGIEGI 633

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQLIHRALA 415
              +S+   +   D D    +P A    D   E +L    + ++++ E+ +N   + A++
Sbjct: 634 SRFLSKVWRLFHSDSDRDEESPAAKLSEDPMPEELLRKMHKTIRKVGEDTENLKFNTAIS 693

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++  V+E+ +     +                    E +  L ILL  + P +  ++++
Sbjct: 694 EMMVFVNELHKAGCRNR--------------------EAVETLLILLAPYAPHITEELWE 733


>gi|33865789|ref|NP_897348.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|48428528|sp|Q7U6T1|SYL_SYNPX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33632959|emb|CAE07770.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 857

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 7/175 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    
Sbjct: 35  FYALSMFPYPSGTLHMGHVRNYVITDVIARVQRMRGHSVLHPMGWDAFGLPAENAAIERN 94

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIYKGC 123
           V    + D+N    R   D L +S  D+ R     H D  R    L+ ++ D G  Y+  
Sbjct: 95  VDPGDWTDRNIDQMRSQLDRLGLSI-DWDREQATCHSDYYRWTQWLFLELFDGGLAYRKN 153

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            +  +   D+    +++V   ADG+ + +    V+  +   +F R++ Y + LL+
Sbjct: 154 ATVNWDPVDQTVLANEQV--DADGRSWRSGAL-VEQRQLNQWFLRITQYAEALLN 205



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 23/180 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        I  
Sbjct: 615 EKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDSDVEGQFR--FLQRIWR 672

Query: 361 LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           LV  + S I    D + P   P    ++D  +       +  + E++Q+++ ++ A++++
Sbjct: 673 LVESADSRI----DSLEPEERPEPLADTDAKVRRAIHIAIDAVSEDLQDEIQLNTAISEL 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + +              T+   A     V  E +  L  LL  F P LA +++  L
Sbjct: 729 MKLTNAI--------------TSVGVAELSTSVLKEALSTLLRLLAPFAPHLAEELWHQL 774


>gi|195167926|ref|XP_002024783.1| GL17916 [Drosophila persimilis]
 gi|194108213|gb|EDW30256.1| GL17916 [Drosophila persimilis]
          Length = 871

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ +   YP+   H+GH     I+D +ARF R+ G +V    G D  G     AA  
Sbjct: 62  DKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFQRMCGKNVFQPIGWDSFGLPAENAANQ 121

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  QN    +     L  S+D    + T   +++   + L+  +  +G  Y+ 
Sbjct: 122 RGVEPATWTQQNIAQMKQQLQRLGCSFDWTHELSTCSPQYYRWTQHLFLMLHKRGLAYQ- 180

Query: 123 CYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSAY 172
                    +EA  N D V K   AD Q      N   W           + +F R SAY
Sbjct: 181 ---------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLKQWFIRTSAY 228

Query: 173 QDKLL 177
             +LL
Sbjct: 229 AKQLL 233


>gi|167753124|ref|ZP_02425251.1| hypothetical protein ALIPUT_01395 [Alistipes putredinis DSM 17216]
 gi|167659438|gb|EDS03568.1| hypothetical protein ALIPUT_01395 [Alistipes putredinis DSM 17216]
          Length = 1132

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 111/236 (47%), Gaps = 28/236 (11%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F  ++  A +L  ++   K + S+G +L K G K+SK LGN +D
Sbjct: 630 YPADFIAEGVDQTRGWFFTLHAIATMLFDSVAF-KNIISNGLVLDKNGNKMSKRLGNAVD 688

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRSVSMI 369
           P E++   G DA R++++       +  +D+DG   ++++    L N      + S   +
Sbjct: 689 PFEILSTYGADATRWYMISNSQPWDNLKFDRDGVDEVRRKFFGTLYN------TYSFFAL 742

Query: 370 LKDYDGM------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             + DG       +P      E D  I+S+ + +++ + E+++N     A   +   V E
Sbjct: 743 YANVDGFTGQEPEVPM-SERPEIDRWIISLLNTLVRNVTESLENYDPTPAARMIQEFVCE 801

Query: 424 -VDRYF---DAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++   + ++ W    T    A+   LY  +E +   ++L   F P ++++IF
Sbjct: 802 NLSNWYVRLNRKRFWGGGLTRDKLAAYQTLYTCLETV---SMLSAPFAPFISDRIF 854


>gi|148260778|ref|YP_001234905.1| valyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146402459|gb|ABQ30986.1| valyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 891

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+ +N      +++P D+ V G DI+     +W A ++      
Sbjct: 463 VLDTWFSSALWPFSTLGWPENTP-ELDRYYPGDVLVTGFDII----FFWVARMIMMGMYA 517

Query: 282 -ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             ++P  + V  +G +   +G+K+SK+ GNVIDP+ +I++ G DALRY ++ +   G++
Sbjct: 518 MGDVPF-RTVMINGLVRDERGQKMSKTKGNVIDPLALIDQFGADALRYTVIAQSGAGRN 575



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 13/75 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA  M + DVL R HR++G D L+  GTD           +AG+ T++ V++  +  
Sbjct: 50  HVGHALTMTLQDVLIRHHRMNGRDALWQPGTD-----------HAGIATQLMVERELQ-- 96

Query: 81  RDMADVLDISYDDFI 95
           R+     +I  D F+
Sbjct: 97  REGTSRQEIGRDAFL 111


>gi|73666721|ref|YP_302737.1| valyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|90101526|sp|Q3YT16|SYV_EHRCJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72393862|gb|AAZ68139.1| valyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 802

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 18/234 (7%)

Query: 257 PADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PADL     +I+R  A Y    A+  + ++P    + S   +     K+SKS GNV+ P 
Sbjct: 477 PADLRAQSHEIIRSWAFYTILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGNVLTPN 536

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKD 372
           ++++E G D +RY+       G D  +  + LK  KR    L N      S+ VSM +  
Sbjct: 537 KLLDEYGADVVRYWTANS-KLGADTTFSNEILKLGKRFTTKLWNA-----SKFVSMFIDQ 590

Query: 373 YDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           Y    P     TE+ D+ ILS   +V+ +  E+  +     AL  + S   +   D Y +
Sbjct: 591 YSE--PDLQYITETMDKWILSKLYKVIVKATESFNSFEYCIALDCIESFFWKDFCDNYLE 648

Query: 430 AQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             K     +  +  +  S V  ++  V+R+L  +L  F+P +  +I+  L+ ++
Sbjct: 649 LSKKRAYGELISKQEHLSAVNTLSF-VLRELLKMLAPFMPYVTEEIYRTLYSSN 701



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTT---- 69
           + Q HIGH +     D +AR+ R+ G DV +  G D++G   +++ +  +    T     
Sbjct: 48  SGQLHIGHVFSYCHTDFIARYQRMLGKDVFYPIGFDDNGLPTERLVEKTKKIRATDISRK 107

Query: 70  --KVFVDQNSRNFR----DMADVLDISYD 92
             K    Q S  FR     +   + ISYD
Sbjct: 108 EFKTICTQVSHEFRIQFKQLFQSIGISYD 136


>gi|323705769|ref|ZP_08117342.1| leucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534987|gb|EGB24765.1| leucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 814

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 40/238 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP--------KKVFSHGFILHK-GEKIS 304
           K  P D ++ G +    H +Y   F+  A   L         K +   G IL   G K+S
Sbjct: 519 KMLPVDKYIGGAEHACMHLLY-ARFVTKALRDLGYLDFDEPFKSLIHQGIILGPDGNKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P E I E G D  R +L+   A  + G ++ DG+K              +SR
Sbjct: 578 KSRGNTISPDEYINEYGSDVFRMYLMFGFAFTEGGPWNDDGIK-------------AMSR 624

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            +  I +  D  I   G       ++ ++ +  V +  ++ + E+ +    + A+A+++ 
Sbjct: 625 FIQRIERLVDKFIEEKGKAGKDEISKDEKELNYVRNYAIKSVTEDAEKFQFNTAIARIME 684

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LV+ + +Y DA+   E+K T        LY   E I  L  LL  F P  A ++++ L
Sbjct: 685 LVNALYKY-DAEI--EIKNTK-------LY--EETIADLVRLLAPFAPHFAEEMWERL 730



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H GH Y    AD  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHAGHWYNYGPADSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYD 92
             G+  +    QN     R  R+M    D  Y+
Sbjct: 90  KTGIHPQDSTLQNIKTMERQLREMGATFDWDYE 122


>gi|297526077|ref|YP_003668101.1| aminoacyl-tRNA synthetase class Ia [Staphylothermus hellenicus DSM
           12710]
 gi|297254993|gb|ADI31202.1| aminoacyl-tRNA synthetase class Ia [Staphylothermus hellenicus DSM
           12710]
          Length = 828

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 85/199 (42%), Gaps = 21/199 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
            W D+  + L  TGY  N D    K +   L   G+DI+R    Y  + L    L   P 
Sbjct: 485 TWFDSSISVLYVTGYKRN-DKLFRKAFKYTLRPQGQDIIRTWLYY--SLLRVYQLTGKPA 541

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V   G  L  KGE + KS GNVIDP   IE+ G DA RY+       G D  + +  
Sbjct: 542 FKWVRITGMGLDEKGEAMHKSKGNVIDPEPYIEKYGADAFRYWAAASAKLGYDYRFSEQV 601

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIR 402
           +  R     A  + N ++R +S        M P P    A    DE+ ++  + +L+EI 
Sbjct: 602 I--RTGFLFATKLWN-IARFIS--------MFPKPEKKPALRPLDEATIAYFNNILREID 650

Query: 403 ENMQNQLIHRALAQVISLV 421
           E   N  +   + ++   V
Sbjct: 651 EAYSNLDVFEPITKIYQFV 669


>gi|170718689|ref|YP_001783409.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082325|sp|B0UV12|SYI_HAES2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|168826818|gb|ACA32189.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 937

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 55/299 (18%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYASVVEQRPEFNGKST-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 575 MLSTATNNKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+  + N  G+   R   +   +L + +G  P      P      
Sbjct: 635 TGEIA----------VSHKILNSAGDTYRRIRNTARFLLANLNGFDPKNDLVNPEEMISL 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYF-----DAQKPWELKKTN 440
           D   +S       EI+E   N   H  + +++   S E+  ++     D Q   +     
Sbjct: 685 DRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 744

Query: 441 PDRASTVLY-VTVEVIRQLAILLQ-------AFVPKLANK--------IFDILFVADEN 483
                T L+ ++  ++R +A +L         ++PKL N+         +D LF  DE+
Sbjct: 745 RRSCQTALWHISEALVRWIAPILSFTADEIWGYLPKLDNRAEFVFTEEFYDGLFGLDES 803


>gi|317507069|ref|ZP_07964832.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254644|gb|EFV13951.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 886

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 22/147 (14%)

Query: 212 KTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           + F  G +IPD     + ++  W  +      T G+ +     +A F+P  + V G DIL
Sbjct: 433 RCFGPGEEIPDGWRQEEDVLDTWFSSGLWAFATLGWPEKTPELEA-FYPVSVLVTGYDIL 491

Query: 269 RFHAIYWPAF----------------LLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
            F A+    F                   A  P  ++++ HG +   KG+K+SKS GNVI
Sbjct: 492 FFWAVRMAMFGGWVGQTGQSATATSAQGLAQAPF-RELWFHGLVRDEKGQKMSKSKGNVI 550

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD 338
           +P++ ++  G DA R+ L+R +A G D
Sbjct: 551 NPLDWLDRFGADATRFALLRAVAPGAD 577



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 35/182 (19%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EK   S  +  PN     H+GHA E  + D + R  R+ G +VL+  G D      A  A
Sbjct: 41  EKPKFSIVVPPPNVTGNLHVGHAMEHAVMDAICRRKRMQGYEVLYLPGFDH-----ASIA 95

Query: 63  QNAGVTTKVFVDQNSRN-------------------------FRDMADVLDISYDDFIRT 97
             A +  ++  +  SR+                          R + D +D S + F  T
Sbjct: 96  TQAAIDKQLAEEGTSRHELGREAFLERAFAWKEQVRGNISGQMRRLGDSVDWSRERF--T 153

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNP 156
            ++      R ++K++ D G IY+      +S +     +D EV +K  DG+  + ++  
Sbjct: 154 MDEGMVKAVRTVFKQLFDAGLIYQAERLVNWSPKQRTVISDAEVIHKEVDGELVSLRYGS 213

Query: 157 VQ 158
           ++
Sbjct: 214 LK 215


>gi|296270438|ref|YP_003653070.1| valyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093225|gb|ADG89177.1| valyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 891

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           DP  ++  W  +     +T G+ D  PD   A+F+P  + V G DIL F       F L 
Sbjct: 469 DPD-VLDTWFSSALWPFSTLGWPDETPD--LARFYPTTVLVTGYDILFFWVARMMMFGLY 525

Query: 282 A--NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           A    P  + V  HG +  + G+K+SK  GNV+DP++ I   G DA R+ L+R    G D
Sbjct: 526 AMDGRPPFRTVVLHGMVRDQFGKKMSKFFGNVVDPLDWIARYGADATRFTLLRGAHPGSD 585


>gi|149236447|ref|XP_001524101.1| hypothetical protein LELG_04914 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452477|gb|EDK46733.1| hypothetical protein LELG_04914 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 930

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 2/123 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE++  Y      YP+ + H+GH     I+DV+AR+ ++ G +V+   G D  G     
Sbjct: 62  LKEKKDFYSLVMFPYPSGKLHLGHLRVYTISDVIARYKKMQGFNVINPMGWDAFGLPAEN 121

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G+   ++ +QN    ++       D  +D  I T    ++   + ++  + +KG 
Sbjct: 122 AAVERGIDPAIWTEQNIATMKEQMQCFLADFDWDREISTCSPEYYKWTQKIFLMLFEKGL 181

Query: 119 IYK 121
            Y+
Sbjct: 182 AYQ 184


>gi|288802534|ref|ZP_06407973.1| valine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288335062|gb|EFC73498.1| valine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 897

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 29/278 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           M  W  +    ++    ++NPD  +  ++ P    V G DI+ F    W A ++ A    
Sbjct: 476 MDTWFSSWLWPISVFDGINNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEY 531

Query: 284 ---LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     G D 
Sbjct: 532 RGKFPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDI 590

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N    N I N           D +     P A   + E   +    V  
Sbjct: 591 LFDETLCEQGRN--FNNKIWNAFRLVQGWETTDAE----QPLANKIAVEWFEAKLKEVNA 644

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----I 455
           E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  +T E      
Sbjct: 645 EMNEQFKSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDKLTYEATLKFF 698

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             L  +L  F+P +  +++  ++   +N      + +L
Sbjct: 699 NSLLKMLHPFMPFITEELWQHIYERKDNESIMRDELKL 736


>gi|169837556|ref|ZP_02870744.1| Methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 74

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 41/58 (70%)

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           L+IS  DF+RTT+KRH ++ R + K++++ GDIYKG Y G Y + +E +  ++++  G
Sbjct: 4   LNISNTDFMRTTQKRHINSVREIVKRVNENGDIYKGEYWGKYCVSEETFVPENQLVDG 61


>gi|4836216|gb|AAD30388.1|AF096862_2 isoleucyl-tRNA synthase [Fervidobacterium pennivorans DSM 9078]
          Length = 897

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 10/136 (7%)

Query: 251 SKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSL 307
           SK + +P DL++ G D  R  F +  + +   +   P  K V +HGFI   +G K+SKSL
Sbjct: 522 SKGERFPVDLYLEGDDQHRGWFQSSIFLSTAKAGTAPF-KAVVTHGFIKDEQGRKMSKSL 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           GNVIDP+E++ + G D LR ++        I  GK+    +  + +++   L   + NL 
Sbjct: 581 GNVIDPMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLY 640

Query: 363 SRSVSMILKDYDGMIP 378
             + + +L  Y+ ++P
Sbjct: 641 DFTEADLLP-YEKLLP 655


>gi|68535622|ref|YP_250327.1| valyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|90103534|sp|Q4JWU8|SYV_CORJK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68263221|emb|CAI36709.1| valS [Corynebacterium jeikeium K411]
          Length = 932

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 24/172 (13%)

Query: 254 KFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLPK----KVFSHGFILH 298
           KF+P  + V G DIL            F + + P  L +     P+     +F HG +  
Sbjct: 504 KFYPTSVLVTGYDILFFWVARMMMFATFASKHTPEILGTGKDGRPQIPFNDIFLHGLVRD 563

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           + G K+SKSLGN IDP++ + + G DALR+ L R    G D    +D  +   N   A  
Sbjct: 564 EHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGSDLPVGEDAAQSSRN--FATK 621

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           + N  +   +++     G +P     T++D  IL      L+E+R+ + + L
Sbjct: 622 LYN--ATKFALMNGARVGELPARETLTDADRWILD----RLEEVRQLVDDAL 667



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 14/93 (15%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K   S  +  PN   Q H+GHA +  + D +AR  R+ G +VL+  G+D          
Sbjct: 64  DKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRKRMQGFEVLWLPGSD---------- 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
            +AG+ T+  V+ N +   +  D  D   D F+
Sbjct: 114 -HAGIATQTKVEANLKE-TEGKDRFDYGRDAFV 144


>gi|320526965|ref|ZP_08028154.1| isoleucine--tRNA ligase [Solobacterium moorei F0204]
 gi|320132550|gb|EFW25091.1| isoleucine--tRNA ligase [Solobacterium moorei F0204]
          Length = 910

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 12/105 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        N   ++   +P DL+  G D  R  F++    +  ++   
Sbjct: 523 IMDVWFDSGSSW--------NELIARGDGYPCDLYFEGSDQYRGWFNSSLIVSTAVNGTA 574

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  K+V SHG+++  KGEK+SKS+GNV++P+++I + G D  R +
Sbjct: 575 PY-KEVLSHGYVVDSKGEKMSKSVGNVVNPMDIINQNGADVFRLW 618



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 23/58 (39%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           Y N   H G A    I D + R H + G    F  G D HG  I  A Q  GV  K  
Sbjct: 58  YANGNLHAGTAMNRTIKDFIIRSHAMSGYYTPFFPGWDTHGLPIENAIQKLGVDRKAL 115


>gi|257454416|ref|ZP_05619678.1| leucyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448182|gb|EEV23163.1| leucyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 904

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   Y+ +   YP+ + H+GH     I+DVL+R++RL G +VL   G D  G     AA
Sbjct: 55  DKPSRYLLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVLQPMGWDAFGMPAENAA 114

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +   N  N R     L +S D   +F   T + ++   + L+ ++  KG +
Sbjct: 115 IANAVAPAAWTFSNIDNMRAQLKSLGLSIDWSREFATCTPE-YYKWEQWLFVQLFKKGLV 173

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK   +  +   D     +++V  G     G     +  P+       Y+F ++AY D+L
Sbjct: 174 YKKLSTVNWDPVDNTVLANEQVVDGRGWRSGALIEKREIPM-------YYFNITAYADEL 226

Query: 177 LS---YYESH-PEFILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           L+     E H P+ ++ ++R    R+E +        +L+   KT D     PD    + 
Sbjct: 227 LNDLDKLEGHWPQQVITMQRNWIGRSEGMEI--HFPYNLNGEEKTLDVFTTRPDTLMGVT 284

Query: 229 YVWIDA 234
           YV + A
Sbjct: 285 YVSVAA 290


>gi|254496566|ref|ZP_05109434.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354190|gb|EET12857.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 824

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     I DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  +N  + +     L  +YD    I T    ++   +  + ++ +KG +YK
Sbjct: 92  KNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREICTCAPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F +++AY D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITAYADELLSSLD 207

Query: 182 SHPEF 186
           +  E+
Sbjct: 208 TLDEW 212



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 518 RAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNV+DP  +I+  G D  R F++
Sbjct: 577 MSKSVGNVVDPNHLIDTYGADTARLFVM 604


>gi|302346416|ref|YP_003814714.1| valine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302151007|gb|ADK97268.1| valine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 897

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 29/278 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           M  W  +    ++    ++NPD  +  ++ P    V G DI+ F    W A ++ A    
Sbjct: 476 MDTWFSSWLWPISVFDGINNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEY 531

Query: 284 ---LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     G D 
Sbjct: 532 RGKFPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDI 590

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N    N I N           D +     P A   + E   +    V  
Sbjct: 591 LFDETLCEQGRN--FNNKIWNAFRLVQGWETTDAE----QPLANKIAVEWFEAKLKEVNA 644

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----I 455
           E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  +T E      
Sbjct: 645 EMNEQFKSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDKLTYEATLKFF 698

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             L  +L  F+P +  +++  ++   +N      + +L
Sbjct: 699 NSLLKMLHPFMPFITEELWQHIYERKDNESIMRDELKL 736


>gi|225018393|ref|ZP_03707585.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
 gi|224948811|gb|EEG30020.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 217 GIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           GI+ PD   +       IM VW D+  ++ +  G  DNP+      WPADL++ G D  R
Sbjct: 516 GIECPDCHCHEFRKETDIMDVWFDSGVSHASVLG--DNPEMR----WPADLYLEGSDQYR 569

Query: 270 --FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
             F +    A       P  K V +HG+++  +G K+SKS+ N + P ++I + G D LR
Sbjct: 570 GWFQSSLLTAVATKGTAPY-KNVCTHGWVVDGEGRKMSKSMQNGVAPEKIISQYGTDILR 628

Query: 327 YFLV 330
            ++ 
Sbjct: 629 LWVA 632


>gi|329118022|ref|ZP_08246735.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465910|gb|EGF12182.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 58/291 (19%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     M VW D+ + + +     +         WPADL++ G D    H  ++ + 
Sbjct: 529 KLPD----TMDVWFDSGSTHYSVLKQREE------LAWPADLYLEGSDQ---HRGWFQSS 575

Query: 279 LLSANLPLP----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-- 331
           +L+    L     K++ +HGF++ + G K+SKSLGNV+ P EV  E G D LR +     
Sbjct: 576 MLTGCATLGRAPYKQLLTHGFVVDQDGRKMSKSLGNVVAPQEVYNEFGADILRLWTATTD 635

Query: 332 ---EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD- 387
              E+A  K+       + KRV           +  ++  +L +     P   A  ++D 
Sbjct: 636 YSGELAISKE-------ILKRVTESYRR-----LRNTLRFLLANLSDFHPIEDAVPQADM 683

Query: 388 ---ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQK 432
              +    V +R LQE    +       H A+  +++  SE           DR +    
Sbjct: 684 VEIDRYALVMARRLQEKLAGDYYPRYAFHFAVQDIVAFCSEDLGAFYLDILKDRLYTTPA 743

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +++    A T LY    + R L +L+   +   A + +DI+   +E+
Sbjct: 744 GSHARRS----AQTALY---HITRSLVLLVSPILCFTAEEAWDIIGGGEED 787



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIILRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 911

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++ +       P       +PADL++ G D  R  F++       ++   
Sbjct: 523 IMDVWFDSGSSHHSVLVERGLP-------YPADLYLEGSDQYRGWFNSSLSTGVAMTGRA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF+L  +G K+SKS+GNVIDP+++I+  G D +R ++ 
Sbjct: 576 PY-KTVVSHGFVLDGQGRKMSKSIGNVIDPLKLIKIYGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I+ D + RF  +DG    +  G D HG  I +A  N     +   +
Sbjct: 58  YANGNIHMGHALNKILKDFVVRFKNMDGYYAPYIPGWDTHGLPIEQALTNNKKVNR--KE 115

Query: 75  QNSRNFRDMADVLDIS-----------------YDDFIRTTEKRHHDTCRILWKKISDKG 117
           +    FR++     +                  +D+   T +K +     +++ K+  +G
Sbjct: 116 KTVAEFRELCKEYALEQVEGQKTQFKRLGVLGDWDNPYITLQKEYEAQQILVFGKMVKEG 175

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E    + E+
Sbjct: 176 LIYKGLKPIYWSPSSETALAEAEI 199


>gi|325973225|ref|YP_004250289.1| isoleucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651827|gb|ADX97909.1| isoleucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 912

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+       + +  N D  +   +P+D+++ G D LR  F++    + L    LP  
Sbjct: 527 VWFDS------GSAFFLNKD-KEGNVYPSDVYIEGGDQLRGWFNSSSILSLLTLGKLPF- 578

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           K + +HGF+L  KG K+SKS GNVIDP+E++ + G D  R ++
Sbjct: 579 KSLVAHGFVLDEKGHKMSKSKGNVIDPLEMVSKYGADIFRLWI 621


>gi|237798422|ref|ZP_04586883.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021274|gb|EGI01331.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 372

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 930

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       + P+      WPAD+++ G D  R  F +    A       
Sbjct: 529 IMDVWFDSGSSHAAVLE--ERPE----LHWPADMYLEGSDQHRGWFQSSLLTAVASRGRA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  +G K+SKS+GNVI P EVI++ G D LR ++ 
Sbjct: 583 PY-KTVLTHGFVVDGEGRKMSKSIGNVIYPQEVIKQYGADILRLWVA 628



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 15/155 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K  +     Y N   HIG A   I+ D++ ++  L G D  +  G D HG  I  A
Sbjct: 45  KGKPKFVLHDGPPYANGNIHIGTALNKILKDIIVKYKSLRGYDAPYVPGWDTHGLPIEHA 104

Query: 62  A-QNAGVTTKVFVDQN-SRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRI---------- 108
           A +  G+        +  R  ++ A   LD+  +DF R       D   I          
Sbjct: 105 AIKILGLNRHELNPLDLRRQCKEYALKCLDMQREDFKRLGVSGDWDNPYITLTPEYEAKQ 164

Query: 109 --LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             ++ +++ KG IYKG  S ++    E    + E+
Sbjct: 165 IEVFGEMAKKGYIYKGLKSVYWCTSCETALAEAEI 199


>gi|15669196|ref|NP_248001.1| valyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501068|sp|Q58413|SYV_METJA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1591666|gb|AAB99009.1| valyl-tRNA synthetase (valS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 878

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 25/279 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +  T +LD+ D    K +P  L   G DI+R  A Y    +  L+   
Sbjct: 451 VLDTWMDSSITPMVITKWLDD-DKFFEKHYPVQLRPQGHDIIRTWAFYTIVKSVALTGKK 509

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +    +      F  K+
Sbjct: 510 PWDEIVINGMVFGEDGHKMSKSRGNVVEPDEIIAKYGADALRLWASNSVVGDDVQFLWKE 569

Query: 345 G------LKKRVNADLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTES-DESILSVCSR 396
                  L+K  NA           R   M I  D    +  P   +   D  ILS   R
Sbjct: 570 VDYGYRFLRKSWNA----------CRFAKMHISDDIIDELKKPMEISNPIDLWILSKLQR 619

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ + ++++N   +  + ++   V     D Y +  K + L   + +      +    V
Sbjct: 620 LIERVDKDLENYRFN-TIVEIYKFVWHEFCDNYIEMVK-YRLYGDDEEAKKEARWTLYYV 677

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           I ++  LL  F P  ++ I +I  + + +  F  +D R 
Sbjct: 678 IDKVVRLLCPFAPHFSDYIAEIYKIDNLHFSFPEVDNRF 716



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG       +     
Sbjct: 38  IDTPPPYPTGRLHLGHALNWTYMDIIARYKRMKGFNVLFPQGWDCHGLPTEVKVEEIHGI 97

Query: 69  TKVFVDQNSRNFRDMA 84
           TK  VD++   FR++ 
Sbjct: 98  TKSDVDRHK--FRELC 111


>gi|13473467|ref|NP_105034.1| leucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|32171580|sp|Q98EU7|SYL_RHILO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14024216|dbj|BAB50820.1| leucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 875

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 8/186 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  KPKYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN    R+   V+ +S D   +F  T +  ++   ++L+    +KG + 
Sbjct: 93  QNKVHPKEWTYQNIATMREQLKVMGLSLDWAREFA-TCDVDYYHRQQMLFLDFVEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    DG+ + +    V+  E   +FF+++ +   LL   
Sbjct: 152 RKSSKVNWDPEDMTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFKITDFAQDLLDSL 207

Query: 181 ESHPEF 186
           E   E+
Sbjct: 208 EGLDEW 213


>gi|167569077|ref|ZP_02361951.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 945

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGCAPY- 606

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAKDALPA-SEWLEIDRYAVAFAAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY VT 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTSAPASNARRS----AQTALYHVTQ 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A ++F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWRVF 798



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|227529019|ref|ZP_03959068.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351031|gb|EEJ41322.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 931

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PADL++ G D  R  F++    + + S
Sbjct: 525 IMDVWFDSGSSHQGVLAERDYLT---------YPADLYLEGSDQYRGWFNSSLITSVVCS 575

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K++ S GF L K G K+SKS GNVIDP +V++++G + +R +++
Sbjct: 576 GHAPY-KEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVM 624



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      AG   K    
Sbjct: 58  YANGNIHIGHAMNKISKDFIVRYKSMSGFRSPYVPGWDTHGLPIEHQLTKAGYDRK---K 114

Query: 75  QNSRNFRDMA 84
            +   FRD+ 
Sbjct: 115 MSLTEFRDLC 124


>gi|227544867|ref|ZP_03974916.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300909913|ref|ZP_07127373.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185141|gb|EEI65212.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892561|gb|EFK85921.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 950

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PADL++ G D  R  F++    + + S
Sbjct: 544 IMDVWFDSGSSHQGVLAERDYLT---------YPADLYLEGSDQYRGWFNSSLITSVVCS 594

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K++ S GF L K G K+SKS GNVIDP +V++++G + +R +++
Sbjct: 595 GHAPY-KEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVM 643



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      +G   K    
Sbjct: 77  YANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRK---K 133

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FRD+     +   D  RT  KR
Sbjct: 134 MSLTEFRDLCREYALKQVDKQRTDFKR 160


>gi|227364736|ref|ZP_03848785.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682637|ref|ZP_08162154.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070195|gb|EEI08569.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978476|gb|EGC15426.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 950

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PADL++ G D  R  F++    + + S
Sbjct: 544 IMDVWFDSGSSHQGVLAERDYLT---------YPADLYLEGSDQYRGWFNSSLITSVVCS 594

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K++ S GF L K G K+SKS GNVIDP +V++++G + +R +++
Sbjct: 595 GHAPY-KEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVM 643



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      +G   K    
Sbjct: 77  YANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRK---K 133

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FRD+     +   D  RT  KR
Sbjct: 134 MSLTEFRDLCREYALKQVDKQRTDFKR 160


>gi|188585176|ref|YP_001916721.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229559953|sp|B2A6C2|SYL_NATTJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|179349863|gb|ACB84133.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 826

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           ++K Y+     YP+ + H+GH     I DVLARF R+ G +VL   G D  G     AA 
Sbjct: 31  KDKYYVLEMFPYPSGKLHMGHMRVYSIGDVLARFQRMRGYNVLHPMGWDAFGLPAENAAI 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +N  + ++ +   N  N +D    L  SYD    + T    ++   + ++ ++   G  Y
Sbjct: 91  ENQDLPSR-WTYANIDNMKDQLQALGTSYDWKREVSTCSPDYYKWTQWMFLQLYKNGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKL-- 176
           K      +    E    +++V  GA  +  +   Q    QW      FF+++ Y D+L  
Sbjct: 150 KKKAPVNWCPECETVLANEQVENGACWRCDSMVEQKQLSQW------FFKITEYADRLDQ 203

Query: 177 -LSYYESHPEFILPIER 192
            L   E  P+ +  +++
Sbjct: 204 DLELLEEWPDRVKTMQK 220



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 29/236 (12%)

Query: 255 FW-PADLHVIGKDILRFHAIYWPAFLLS------ANLPLP-KKVFSHGFILHKGEKISKS 306
           +W P D ++ G +    H +Y   F          N   P  ++ + G +   G K+SKS
Sbjct: 531 YWMPVDQYIGGIEHAVLHLLYARFFTKVMYDQGYTNFKEPFSRLLAQGMVNKDGAKMSKS 590

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+ P E++   G D  R F++      KD  ++ +G++          +  LV+ + 
Sbjct: 591 KGNVVSPDEILRTYGADTGRLFILFAAPPEKDLDWNDEGVEGCYR--FLQRLYRLVNDNQ 648

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
           +++    D        FT+ D+    +  + ++++ +++ +    + A++ ++ L +   
Sbjct: 649 NLVDLQLDDT-----KFTKEDKEYHRLIHKTIKKVTDDISERHNFNTAISAIMELTNASS 703

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +Y       E K+ N     ++L   +E I    +LL  F P +A ++++ L   D
Sbjct: 704 KYK------EQKEVN----ESLLRTGLETI---VMLLAPFTPHIAEELWETLGYQD 746


>gi|148653689|ref|YP_001280782.1| isoleucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148572773|gb|ABQ94832.1| Isoleucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 946

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 32/207 (15%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L+  D   A   PAD+++ G D  R  F      +  +    P  
Sbjct: 542 VWFDSGTTHFAV---LEQDD---ALVNPADMYLEGSDQHRGWFQTSLLTSEAMYGRAPY- 594

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K+V +HGF++   G K+SKSLGN+I+P + I + G D LR ++       E+  GK  F 
Sbjct: 595 KQVLTHGFVVDENGRKMSKSLGNIINPQDEINKTGADMLRMWIASSDYRYEMNAGKQAFK 654

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSR 396
               + +R+              +V  +L + D   P   +         D+ I+    +
Sbjct: 655 GATDMYRRIR------------NTVRFLLANTDDFNPETDSLEMDELVSLDKYIMLRAQK 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE 423
           V Q I         H+   QV +  S+
Sbjct: 703 VQQAIITAYDAMDFHQVTQQVTAFCSQ 729



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           REK  +     Y N Q H+GHA   ++ D++ +   L G D  +  G D HG        
Sbjct: 55  REKYILHDGPPYANGQIHLGHAVNKVLKDIIVKSKTLSGFDAPYVPGWDCHGLPIEQKVE 114

Query: 56  QKIAKAAQNAGVT 68
            K+ K  Q    T
Sbjct: 115 AKVGKVGQKVSAT 127


>gi|58416839|emb|CAI27952.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1125

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + + +    ++  F+LS  L   P  K    HG +L  +G+K+SK L N 
Sbjct: 605 YFPADF--ITEYVAQTRGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNY 662

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+E+ ++ G DA+R+ ++   ++ G D   DKDG+  R
Sbjct: 663 ADPMEIFKQYGSDAMRFLMLSHTVSYGGDLLLDKDGVMVR 702


>gi|306825946|ref|ZP_07459284.1| leucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431878|gb|EFM34856.1| leucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 833

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|320532220|ref|ZP_08033084.1| leucyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135556|gb|EFW27640.1| leucyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 993

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 11/108 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+EK ++     YP+ +  H+GH    I  DV+ARF+R+ G +VL+T G D  G    + 
Sbjct: 53  EKEKFFLLDMFPYPSGKGLHVGHPLGYISTDVVARFNRMTGKNVLYTMGYDAFGLPAEQY 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
           A   G   ++  + N  N R     L +S+D          D++R T+
Sbjct: 113 AVTTGQHPRISTEANIANMRRQLRRLGLSHDPRRSLATIDVDYVRWTQ 160


>gi|313665195|ref|YP_004047066.1| valine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949462|gb|ADR24058.1| valine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 872

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 35/214 (16%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           + +F ++  +++ ++    S         R N+V++   +   D  +SR+ + WG +IP 
Sbjct: 359 DQWFVKMDKFKNMVIDLQNSDNRINFFPNRFNDVLNRWMTNAHDWCISRQLW-WGHQIPC 417

Query: 222 --DDPQYIMYVWIDA---LTNYLTTTGYLD--------------NPDGSKAKFW----PA 258
                   MYV I+    + N+      LD              N  G +++++    P 
Sbjct: 418 WYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYFKNYFPT 477

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVID 312
            + V G DI+ F    W A ++   L   K+     V  HG +  +   K+SKSLGN ID
Sbjct: 478 SVLVTGYDIIFF----WVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNGID 533

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P++VI   G D+LR FL+     G+D  Y  + +
Sbjct: 534 PMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKI 567



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          HIGHA++  + D + RF +L G D LF  G D           ++G++T+V V+Q
Sbjct: 53 HIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMD-----------HSGISTQVKVEQ 96


>gi|198463038|ref|XP_001352664.2| GA20381 [Drosophila pseudoobscura pseudoobscura]
 gi|198151087|gb|EAL30162.2| GA20381 [Drosophila pseudoobscura pseudoobscura]
          Length = 871

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ +   YP+   H+GH     I+D +ARF R+ G +V    G D  G     AA  
Sbjct: 62  DKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFQRMCGKNVFQPIGWDSFGLPAENAANQ 121

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  QN    +     L  S+D    + T   +++   + L+  +  +G  Y+ 
Sbjct: 122 RGVEPAAWTQQNIAQMKQQLQRLGCSFDWTHELSTCSPQYYRWTQHLFLMLHKRGLAYQ- 180

Query: 123 CYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSAY 172
                    +EA  N D V K   AD Q      N   W           + +F R SAY
Sbjct: 181 ---------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLKQWFIRTSAY 228

Query: 173 QDKLL 177
             +LL
Sbjct: 229 AKQLL 233


>gi|148377630|ref|YP_001256506.1| leucyl-tRNA synthetase (leucine-tRNA ligase) [Mycoplasma agalactiae
           PG2]
 gi|148291676|emb|CAL59062.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 779

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I D LARF+R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRKGFNVLHPFGWDAFGLPAENAAIKH 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDKGDIY 120
            +  K +  QN  +  +    L IS   F    E    D     W+     K+ + G +Y
Sbjct: 93  NIHPKTWTYQNISSMNENIKKLGIS---FAWNYECITSDEIYTRWEQEIFIKMWNNGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            K     W + +D+    +++V  G   +       P++  E E Y+ ++  Y  +L
Sbjct: 150 RKKALLNWCN-KDKTVLANEQVINGCCWRC----DEPIEIKETEQYYLKIRDYAKEL 201



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L    K+SKS GN + P +++E+ G D +R F++      K+  +  D ++
Sbjct: 527 KSLLTQGMVLKDSAKMSKSKGNTVSPTDLLEKYGADTVRLFILFAAPPAKELEWSDDSVE 586


>gi|94495661|ref|ZP_01302241.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425049|gb|EAT10070.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 972

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 10/92 (10%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFI-LHKGEKISKS 306
           A+ +P DL + G DIL     +W A +    +     +P +K++ HG +    G+K+SKS
Sbjct: 578 ARHYPNDLLISGFDIL----FFWDARMAMQGMEFMGDVPWRKLYLHGLVRAADGQKMSKS 633

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            GNV+DP+ +I+  G DALR+F+    + G+D
Sbjct: 634 KGNVVDPLGLIDRFGADALRFFMAAMESQGRD 665



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 17/77 (22%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ--NSR 78
           HIGHA +  + D++ R+ RL G D L+  GTD           +AG+ T++ V++  N++
Sbjct: 51  HIGHALDNTLQDIVIRYERLRGKDALWVVGTD-----------HAGIATQMVVERQLNAK 99

Query: 79  NFRDMADVLDISYDDFI 95
             +      D S +DFI
Sbjct: 100 GEKRT----DYSREDFI 112


>gi|91785203|ref|YP_560409.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358460|sp|Q13U82|SYL_BURXL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91689157|gb|ABE32357.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 863

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 16/189 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     
Sbjct: 29  VTDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
           AA    V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +K
Sbjct: 89  AAMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEK 146

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           G  YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y 
Sbjct: 147 GIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYA 199

Query: 174 DKLLSYYES 182
           D+LL+  E 
Sbjct: 200 DELLNDLEG 208


>gi|315653381|ref|ZP_07906303.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489306|gb|EFU78946.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|313678677|ref|YP_004056417.1| isoleucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950455|gb|ADR25050.1| isoleucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 892

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T  L         +  K    P DL++ G D  R  F++    +   +   
Sbjct: 523 IMDVWFDSGTTSLAV-------EIDKNLKPPYDLYLEGSDQYRGWFNSSLINSVAYTHKS 575

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K++ SHGF+L  KGEK+SKS GNV+DP++VI++ G D LR ++
Sbjct: 576 PY-KQIVSHGFVLDSKGEKMSKSKGNVVDPLKVIKKYGADILRLWV 620



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVF- 72
           Y N   HIGHA   I+ D++ R+  + G    +  G D HG  I  K   +A +  KV  
Sbjct: 61  YANGSIHIGHALNKILKDIIVRYKSMRGFYSPYVPGWDTHGLPIELKMLTDAKINYKVIS 120

Query: 73  ---------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                          ++     F+ +  + D  +    +T E +       L+KK+   G
Sbjct: 121 PIELRKRASEYADAQIENQISQFKSLQLLTDFKH--IYKTKEPKFEAAQLRLFKKMVLDG 178

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            +YKG    ++S   +    + EV
Sbjct: 179 LVYKGLKPVYWSPSSQTALAEAEV 202


>gi|322375009|ref|ZP_08049523.1| leucine--tRNA ligase [Streptococcus sp. C300]
 gi|321280509|gb|EFX57548.1| leucine--tRNA ligase [Streptococcus sp. C300]
          Length = 833

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|317504573|ref|ZP_07962545.1| leucine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664304|gb|EFV03999.1| leucine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 968

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ ARF RL G +VL   G D +G    +
Sbjct: 28  KSKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARFKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +  + N  ++R+  D +  S+  D  +RT + +++
Sbjct: 88  YAIQTGQHPAITTETNIDHYREQLDKIGFSFDWDREVRTCDPKYY 132


>gi|309808603|ref|ZP_07702495.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325913434|ref|ZP_08175800.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308168077|gb|EFO70203.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325477203|gb|EGC80349.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|302348087|ref|YP_003815725.1| Valyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328499|gb|ADL18694.1| Valyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 821

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
            W D+  + L  T +L++P+  K K  P  L   G+DI+R    Y  + L    L   P 
Sbjct: 469 TWFDSSISMLYVTKWLEDPEFFK-KASPNVLRPQGEDIIRTWLYY--SLLRVYQLTGKPA 525

Query: 287 PKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            + +   G  L  KG  + KSLGNVIDP  +I + G DA R++       G D  YD+  
Sbjct: 526 FRWIRITGMGLDPKGRPMHKSLGNVIDPDPIISKYGADAFRFWAASSAKLGYDYRYDEK- 584

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            K     + A  + NL +R +S   +  +       +    D + L++  + L    +  
Sbjct: 585 -KVITGRNFATKLWNL-ARFISAFPESQEV-----SSLRPIDRAFLALAQQYLDAAVKGY 637

Query: 406 QNQLIHRALAQVISLVSEV----------DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  ++    Q+  L   V          DR +    P+E      DRAS   Y    + 
Sbjct: 638 EDLDVYEPAVQLYELSWNVFAAHYVELVKDRAYSEGYPYE------DRASA-WYTLHRIF 690

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
           R   +LL   +P + + I+  L+
Sbjct: 691 RAALVLLSPIMPFVTDYIYRQLY 713


>gi|255066104|ref|ZP_05317959.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049649|gb|EET45113.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 826

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 45/278 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 431 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 484

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 485 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEI 544

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGA-FTESDESILSVCSRV 397
                   +R+   L+    N         L D+D    T P A   E D   L V +R 
Sbjct: 545 LKRVTESYRRIRNTLSFLFAN---------LSDFDPFEHTVPQADMVEIDRYAL-VLARQ 594

Query: 398 LQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRAS 445
           LQE    +       H A+  +++  SE           DR +  +     +++    A 
Sbjct: 595 LQERLAGDFYPRYAFHFAVKDIVAFCSEDLGAFYLDILKDRLYTTKADSHARRS----AQ 650

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 651 TALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 685


>gi|229916464|ref|YP_002885110.1| leucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467893|gb|ACQ69665.1| leucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 801

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++  Y+     YP+ A  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 31  EKDCFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGYNVLHPIGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N   FR     L  SY  D  I TT+ +++   + ++ ++ ++G  
Sbjct: 91  ALDTGNDPREFTARNIETFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLFERGLA 150

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG      H PV  +  + +  R++ Y ++LL 
Sbjct: 151 YVDEVAVNWCPALGTVLANEEVI----DGLSERGNH-PVYRVPMKQWVLRITEYAERLLE 205

Query: 179 YYES--HPEFILPIER 192
             E    PE +  ++R
Sbjct: 206 DLEGLDWPESVKEMQR 221



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFIL-H 298
           D  K K W P DL++ G +    H +Y   W   L    + +P     +K+++ G IL  
Sbjct: 516 DPEKLKRWLPVDLYIGGTEHAVLHLLYARFWHKVLFDIGV-VPTSEPFQKLYNQGMILGE 574

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P ++++  G D LR +
Sbjct: 575 NNEKMSKSRGNVVNPDDIVKSHGADTLRLY 604


>gi|58417799|emb|CAI27003.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1124

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + + +    ++  F+LS  L   P  K    HG +L  +G+K+SK L N 
Sbjct: 605 YFPADF--ITEYVAQTRGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNY 662

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+E+ ++ G DA+R+ ++   ++ G D   DKDG+  R
Sbjct: 663 ADPMEIFKQYGSDAMRFLMLSHTVSYGGDLLLDKDGVMVR 702


>gi|148543832|ref|YP_001271202.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|148530866|gb|ABQ82865.1| Isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 960

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PADL++ G D  R  F++    + + S
Sbjct: 554 IMDVWFDSGSSHQGVLAERDYLT---------YPADLYLEGSDQYRGWFNSSLITSVVCS 604

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K++ S GF L K G K+SKS GNVIDP +V++++G + +R +++
Sbjct: 605 GHAPY-KEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVM 653



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      +G   K    
Sbjct: 87  YANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRK---K 143

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FRD+     +   D  RT  KR
Sbjct: 144 MSLTEFRDLCREYALKQVDKQRTDFKR 170


>gi|312872405|ref|ZP_07732474.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091987|gb|EFQ50362.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|303243869|ref|ZP_07330209.1| valyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485805|gb|EFL48729.1| valyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 885

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 35/319 (10%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LPI+   E     K G K+L            IP+    ++  W+D+    +   G+LD+
Sbjct: 427 LPIDPTKECPYTCKCGNKNL------------IPETD--VLDTWMDSSITPMVIAGWLDD 472

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +  K+ + P  L   G DI+R  A Y    +  L+   P  + V +       G K+SK
Sbjct: 473 DEFFKSHY-PVQLRPQGHDIIRTWAFYTIIKSIALTDKKPWDEIVINGMVFGEDGYKMSK 531

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG------LKKRVNADLANGIG 359
           S GN+++P E+ +  G DALR +           F  K+       L+K  NA     + 
Sbjct: 532 SRGNIVEPFEITKNYGSDALRLWAANSTLGNDVPFAWKEVDFGYRFLRKFWNASRFAKM- 590

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL-AQVI 418
           NL   ++  I K+ +  +  P      D  ILS  +R+++++ E++ N   +  +  Q  
Sbjct: 591 NLDDETIDTI-KNINITLNNP-----VDLWILSKLNRLIKKVSEDLNNYKFNTIVDIQKF 644

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                 D Y +  K     K N ++A        Y    VI     L+  F P  A+ + 
Sbjct: 645 VWHELCDNYIEMVKYRLYNKENTEKAKISKFNAQYTLYTVITNTLKLMAPFAPHFADVVG 704

Query: 475 DILFVADENRCFQSLDQRL 493
            I  V + +  +  +D+ L
Sbjct: 705 YIYKVDNLHTSWCVVDENL 723



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 17/137 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GHA      D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHALNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTKVFVD-------------QNSRNFRDMADVLDISYD---DFIRTTEKRHHDT 105
            +     TK  +D             +N    R+    L IS D   ++I T    +   
Sbjct: 91  VEEIHGITKSDIDRHEFRKLCVELTKENIEKMREQVKSLGISIDWDREYI-TMNPDYVKK 149

Query: 106 CRILWKKISDKGDIYKG 122
            +  + ++ +KG IY+G
Sbjct: 150 SQTAFVRMYNKGLIYRG 166


>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 911

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++ +       P       +PADL++ G D  R  F++       ++   
Sbjct: 523 IMDVWFDSGSSHHSVLVERGLP-------YPADLYLEGSDQYRGWFNSSLSTGVAMTGRA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF+L  +G K+SKS+GNVIDP+++I+  G D +R ++ 
Sbjct: 576 PY-KTVVSHGFVLDGQGRKMSKSIGNVIDPLKLIKIYGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-AQNAGVTTKVFV 73
           Y N   H+GHA   I+ D + RF  +DG    +  G D HG  I +A   N  V  K   
Sbjct: 58  YANGNIHMGHALNKILKDFVVRFKNMDGYYAPYIPGWDTHGLPIEQALTNNKKVNRK--- 114

Query: 74  DQNSRNFRDMADVLDIS-----------------YDDFIRTTEKRHHDTCRILWKKISDK 116
           ++    FR++     +                  +D+   T +K +     +++ K+  +
Sbjct: 115 EKTVAEFRELCKEYALEQVEGQKTQFKRLGVLGDWDNPYITLQKEYEAQQILVFGKMVKE 174

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEV 141
           G IYKG    ++S   E    + E+
Sbjct: 175 GLIYKGLKPIYWSPSSETALAEAEI 199


>gi|325276215|ref|ZP_08142014.1| leucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324098644|gb|EGB96691.1| leucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 868

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNNVAPAKWTYENIEYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 152 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|40788954|dbj|BAA04877.2| KIAA0028 [Homo sapiens]
          Length = 904

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 80  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 139

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 140 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 199

Query: 120 YK 121
           Y+
Sbjct: 200 YQ 201



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D       V  D   G+  
Sbjct: 639 EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-------VKTDALPGVLR 691

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--------SVCSRVLQEIRENMQNQ 408
               L + +   I     G  P P   +  +++          SV S+V     E+    
Sbjct: 692 WQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFS-- 749

Query: 409 LIHRALAQVISLVSEVDR 426
            ++ A++Q++ L + + +
Sbjct: 750 -LNSAISQLMGLSNALSQ 766


>gi|302191489|ref|ZP_07267743.1| isoleucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806571|ref|ZP_07700571.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167050|gb|EFO69229.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|296160453|ref|ZP_06843269.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889202|gb|EFG69004.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 863

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 16/189 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     
Sbjct: 29  VTDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
           AA    V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +K
Sbjct: 89  AAMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEK 146

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           G  YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y 
Sbjct: 147 GIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYA 199

Query: 174 DKLLSYYES 182
           D+LL+  E 
Sbjct: 200 DELLNDLEG 208


>gi|261343549|ref|ZP_05971194.1| leucine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568698|gb|EFB74233.1| leucine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 860

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +    +L   YD    + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKGQLKMLGFGYDWNREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +     PV+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEDWPEQVKTMQR 221


>gi|154322417|ref|XP_001560523.1| hypothetical protein BC1G_00551 [Botryotinia fuckeliana B05.10]
 gi|150847885|gb|EDN23078.1| hypothetical protein BC1G_00551 [Botryotinia fuckeliana B05.10]
          Length = 134

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K+YI     YP+   H+GH     I+DVLARFH + G +V+   G D  G     AA
Sbjct: 35  EGQKMYILPMFPYPSGDLHLGHFRAYTISDVLARFHTMKGYNVVHPIGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFR 81
              G+   V+  QN +  +
Sbjct: 95  IERGIDPAVWTKQNIQKMK 113


>gi|57239215|ref|YP_180351.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|161598454|ref|YP_197385.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161294|emb|CAH58215.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1104

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + + +    ++  F+LS  L   P  K    HG +L  +G+K+SK L N 
Sbjct: 585 YFPADF--ITEYVAQTRGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNY 642

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+E+ ++ G DA+R+ ++   ++ G D   DKDG+  R
Sbjct: 643 ADPMEIFKQYGSDAMRFLMLSHTVSYGGDLLLDKDGVMVR 682


>gi|84503349|ref|ZP_01001418.1| isoleucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84388259|gb|EAQ01210.1| isoleucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 998

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 31/208 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DG+      AD+++ G D  R  FH+    A       
Sbjct: 605 ILDVWFDSGSTHAFV--LRDRADGAPDGI--ADVYLEGTDQHRGWFHSSMLQACGTKGRA 660

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF L  KG K+SKSLGN I P EV+++ G D LR ++ +         Y  
Sbjct: 661 PY-RNVVTHGFTLDEKGNKMSKSLGNTILPEEVVKQYGADILRLWVAQ-------ADYSA 712

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D   +R+  ++  G+ +   R  + +      M+ +   F E D        RV  E   
Sbjct: 713 D---QRIGPEILKGVADSYRRLRNTLRF----MLGSLADFREED--------RVAPEEMP 757

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            ++  ++HR +A +   V E  R FD Q
Sbjct: 758 ELERWVLHR-MAVLDETVREGYRSFDFQ 784



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 12/102 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           RE   +     Y N   HIGHA   I+ D++ R H++ G D  +  G D HG  I     
Sbjct: 51  REPFVLHDGPPYANGNLHIGHALNKILKDMIVRSHQMMGRDARYVPGWDCHGLPIEWKIE 110

Query: 59  ----AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               AK      V    F  Q  R F D    +D+  ++F R
Sbjct: 111 EQYRAKGMDKDAVDVVDF-RQECRAFAD--SWIDVQREEFKR 149


>gi|302842510|ref|XP_002952798.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
 gi|300261838|gb|EFJ46048.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
          Length = 1034

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 25/154 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---ANL 284
           M VW D+ +++    G L          +PADL++ G D    H  ++ + LL+   AN 
Sbjct: 574 MDVWFDSGSSW---AGVLQADAVWAGLSYPADLYLEGSDQ---HRGWFQSSLLTSVAANG 627

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL---- 329
             P K+V +HGF+L  KG+K+SKSLGNV+DP  VIE           G D LR ++    
Sbjct: 628 IAPYKQVLTHGFVLDEKGQKMSKSLGNVVDPRVVIEGGKDVKQQPAYGADVLRLWVASVD 687

Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
              ++A G         + ++V   L   +GNL 
Sbjct: 688 YTSDVAIGSSILRQMADMYRKVRGTLRFLLGNLA 721



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 21/44 (47%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D + R+  L G    F  G D HG  I
Sbjct: 134 YANGDLHIGHALNKILKDFINRYQLLQGRRAKFVPGWDTHGLPI 177


>gi|240047826|ref|YP_002961214.1| valyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985398|emb|CAT05411.1| Valyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 823

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILH-KGEKISKSL 307
           K++P  L V G DI+ F    W A +  ++L + K     +V  HG I   +G K+SKSL
Sbjct: 461 KYYPTSLLVTGWDIIFF----WVARMYFSSLNVIKQKPFERVLIHGLIRDIQGRKMSKSL 516

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GN IDP+E+I++ G D LR  L+     G+D
Sbjct: 517 GNGIDPMEIIDKYGSDVLRQTLIFNSTPGQD 547


>gi|161986610|ref|YP_196426.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1105

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + + +    ++  F+LS  L   P  K    HG +L  +G+K+SK L N 
Sbjct: 585 YFPADF--ITEYVAQTRGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNY 642

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+E+ ++ G DA+R+ ++   ++ G D   DKDG+  R
Sbjct: 643 ADPMEIFKQYGSDAMRFLMLSHTVSYGGDLLLDKDGVMVR 682


>gi|94496575|ref|ZP_01303151.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423935|gb|EAT08960.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 851

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 6/181 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+ + HIGH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  KPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLARFRRMTGHEVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N R     L   I +   + T E  ++   + L+  + + G +Y+
Sbjct: 92  EKKVHPGDWTRSNIANMRAQLKKLGFAIDWSRELATCEPDYYGHEQALFLDMLEAGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +   D     +++V    DG+ + +   PV+  +   +F +++ + D LL   +
Sbjct: 152 KESSVNWDPVDMTVLANEQVI---DGKGWRS-GAPVEKRKLNQWFLKITQFADDLLDGLK 207

Query: 182 S 182
           S
Sbjct: 208 S 208



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 34/172 (19%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++IE+ G DA+R+F++ +    +D  +   G++         G   
Sbjct: 622 EKMSKSKKNVVDPDDIIEQYGADAVRWFMLSDSPPERDLPWTDSGIE---------GSWR 672

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V+R V  +  + D       A    D+++     + +  + +++++   ++A+A++  L
Sbjct: 673 FVNR-VWRLFAEAD------AAAEGQDKALDRKLHQTIDGVAKDIESLGFNKAVAKIYEL 725

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           V+ ++            K  P  + T        IR LA+L+    P LA +
Sbjct: 726 VNAIE------------KARPSASRTT------AIRTLALLVAPMTPHLAEE 759


>gi|7661872|ref|NP_056155.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|2501029|sp|Q15031|SYLM_HUMAN RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|19683964|gb|AAH25989.1| Leucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119585144|gb|EAW64740.1| leucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|124126795|gb|ABM92170.1| leucyl-tRNA synthetase 2, mitochondrial [synthetic construct]
 gi|157928010|gb|ABW03301.1| leucyl-tRNA synthetase 2, mitochondrial [synthetic construct]
 gi|168274302|dbj|BAG09571.1| leucyl-tRNA synthetase [synthetic construct]
          Length = 903

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D       V  D   G+  
Sbjct: 638 EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-------VKTDALPGVLR 690

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--------SVCSRVLQEIRENMQNQ 408
               L + +   I     G  P P   +  +++          SV S+V     E+    
Sbjct: 691 WQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFS-- 748

Query: 409 LIHRALAQVISLVSEVDR 426
            ++ A++Q++ L + + +
Sbjct: 749 -LNSAISQLMGLSNALSQ 765


>gi|298369585|ref|ZP_06980902.1| leucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282142|gb|EFI23630.1| leucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 878

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL 
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLK 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y +N +GSK    PAD+ +   D  R  +    A L +  LP+         ++ 
Sbjct: 586 VCETYYRENANGSKDWINPADVELTFDDKGRPVS----AVLKADGLPV---------VIS 632

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             EK+SKS  N +DP E+I   G D  R F++
Sbjct: 633 GTEKMSKSKNNGVDPQELINAYGADTARLFMM 664


>gi|223039908|ref|ZP_03610191.1| valyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878776|gb|EEF13874.1| valyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 982

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 24/233 (10%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SANLPLP-KKVFSHGFIL-HKGEK 302
           DG  A+F+P +L + G DIL F    W A ++    +A   LP   ++ H  +   +G K
Sbjct: 585 DGDLAEFYPNNLLITGFDILFF----WVARMMFQGENALGKLPFDDIYLHALVKDEQGRK 640

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP+  I+E   D LR+ L      G+D     + +K      + N    L 
Sbjct: 641 MSKSLGNVIDPLVSIDEYSADILRFTLALLAVQGRDIKLSDEKMKL-----VRNFTNKLY 695

Query: 363 SRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + S  ++L +     +      T+  + ILS  +  ++E REN+     + A   +   +
Sbjct: 696 NASKYLLLNESKFANLSDAKIETKLGKYILSRFNECVREARENIDAYRFNDAANAIYKFL 755

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              D + D    W ++ +  D+ S  +     + ++   LL  F+P ++  +F
Sbjct: 756 --WDEFCD----WGIELSKADKGS--VRELGAIFKEAMRLLSPFMPFISEFLF 800


>gi|254167151|ref|ZP_04874004.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624007|gb|EDY36569.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 939

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 37/201 (18%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF-----TTGT---- 51
           ++ ++K +I+    Y +   HIGH     + D++ARF RL G +VLF      TGT    
Sbjct: 24  VENKKKFFITVPYPYMSGSLHIGHGRTFTMGDIIARFKRLQGYNVLFPMAFHVTGTPVLA 83

Query: 52  -------------------------DEHG-QKIAKAAQNAGVTTKVFVDQNSRNFRDMAD 85
                                    DE+  ++I K+  N     + F ++  ++F  M  
Sbjct: 84  IADAIKAGDEKVINLYKEYVRIYEDDENRVEEIVKSFVNPENIARYFAEKTQQDFIGMGY 143

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            +D  +     T E  ++      +KK+ DKG I KG Y   YS+ D     +D++  G 
Sbjct: 144 SID--WRRKFHTAEPIYNKFVEWQFKKLYDKGVIKKGKYPITYSIDDGNPVGEDDIEDGD 201

Query: 146 DGQYYNAQHNPVQWMEEEGYF 166
             +    +   +++  E+GY 
Sbjct: 202 TNKVSIMEFTAIKFQFEDGYL 222



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 34/141 (24%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK +  +G ++ +G KISKS GNVI    V ++ GVD  R +      C  +   D D +
Sbjct: 619 PKAITLNGLMIREGAKISKSKGNVIPLAHVADKYGVDLFRLY------CAVNA--DLDSV 670

Query: 347 KKRVNADLAN------GIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                +++A+         N++  SV  + LK+YD            D+ +LS   R L+
Sbjct: 671 VDWRESEIASLRRRFVQFVNILEESVEAVPLKEYDWY----------DKWLLSKFYRRLK 720

Query: 400 E---------IRENMQNQLIH 411
           E         IR+ M N L H
Sbjct: 721 ESVTLFDSFRIRDAMINMLFH 741


>gi|163869196|ref|YP_001610448.1| leucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189082982|sp|A9IYY8|SYL_BART1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161018895|emb|CAK02453.1| Leucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 886

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 41  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAL 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + V  K +  +N    R     L +S D   +F  T +  ++   ++L+     KG + 
Sbjct: 101 QSKVHPKTWTYENIAVMRGQLKQLGLSLDWAREFA-TCDVDYYHRQQMLFLDFYQKGLVA 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    DG+ + +    V+  E   +FF++S + + LL+  
Sbjct: 160 RKVAKVNWDPVDHTVLANEQV---VDGRGWRS-GALVEQRELTQWFFKISDFSEDLLAGL 215

Query: 181 E 181
           E
Sbjct: 216 E 216



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 13/120 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++       A+    
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTVRWFVLSDSPPERDVIWTESGVEG------AHRFVQ 696

Query: 361 LVSRSVSM---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            V R V++   +LKD        GA  E  ++      R+L  + ++++    +RA+A++
Sbjct: 697 RVWRHVALSAAVLKDVAPRAGHQGAALELSKA----AHRMLHAVEDDLEKFAFNRAIARL 752


>gi|84029517|sp|Q5FH91|SYI_EHRRG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1118

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + + +    ++  F+LS  L   P  K    HG +L  +G+K+SK L N 
Sbjct: 598 YFPADF--ITEYVAQTRGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNY 655

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+E+ ++ G DA+R+ ++   ++ G D   DKDG+  R
Sbjct: 656 ADPMEIFKQYGSDAMRFLMLSHTVSYGGDLLLDKDGVMVR 695


>gi|37523650|ref|NP_927027.1| leucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|48428525|sp|Q7NE01|SYL_GLOVI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|35214655|dbj|BAC92022.1| leucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 847

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K Y  +   YP+   H+GH     I DV++R+ R+ G +VL   G D  G     
Sbjct: 26  MDGRPKFYALSMFPYPSGALHMGHVRNYSITDVISRYKRMRGFNVLHPIGWDAFGLPAEN 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY 91
           AA + G+    + +QN    R+    L  +Y
Sbjct: 86  AAIDRGIHPAQWTEQNIAQMREQLKRLGFAY 116


>gi|254780079|ref|YP_003058186.1| leucyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001992|emb|CAX30251.1| Leucine tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Helicobacter pylori B38]
          Length = 808

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 32  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 92  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 152 AMLNWCPNDKTVLANEQV---IDGKCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLET 206



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 520 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKNGAKMSKS 578

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV 330
            GNV+ P E++++ G DA R F++
Sbjct: 579 KGNVVSPKEILKKYGADAARLFIL 602


>gi|224534475|ref|ZP_03675051.1| valine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514152|gb|EEF84470.1| valine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 875

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 146/347 (42%), Gaps = 51/347 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F R+    DK L   E+      P +  N    +  S ++D  +SR+   WG +IP   
Sbjct: 360 WFVRMKPLADKALKALENGELRFYPKKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPAWY 417

Query: 222 -----------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                       DP                ++  W  +     ++ G+ ++    K  ++
Sbjct: 418 NIDTAELVISDTDPSLDEKNIGKRFVQDPDVLDTWFSSWLWPFSSLGWPNDTSDFK-NYY 476

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLGNV 310
           P +  +   DI+ F    W A ++ A L    ++ F   +I       +GEK+SKSLGN 
Sbjct: 477 PTNTLITAYDIIFF----WVARMVMAGLEFTGQIPFKDVYITPLLRDKQGEKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYD-KDGLKKRVNADLANGIGNLVSRSVSMI 369
           IDP+++I E G D+LR+ L      G+D   D KD +   + A  AN + N  S+ + + 
Sbjct: 533 IDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDFKDFM---LGAKFANKVFN-ASKFILLN 588

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           LK+ +  I     F + D+ +L+  +  +  +  +  N   + A   V         D Y
Sbjct: 589 LKNRE--ILNDLEFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDWY 646

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K  +L   + +  +  +   +  +++  ++L  F+P +  KI+
Sbjct: 647 IEISKI-DLNSEDVNIQNMAISKLLFFLKKALVILHPFIPFVTEKIY 692



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 25/156 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA------QNAGVTTKVF-- 72
           H+GHA   ++ D+L R+ R+   + L+  GTD  G  IA  A      +N G +   F  
Sbjct: 52  HMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAG--IATQAVFERHLKNIGKSKNDFER 109

Query: 73  ----------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI---LWKKISDKGDI 119
                      D++     D    L  SYD   R         C+    ++K +  KG I
Sbjct: 110 EELVQEIFKLKDKHRGVIVDQIKKLGASYDH-SRERFTLDEGLCKAVNKVFKDLYSKGLI 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           Y+G Y         +  +D+E+ YK  DG+ Y  ++
Sbjct: 169 YRGEYLVNLDPGSGSVVSDEEIEYKEVDGKLYFVKY 204


>gi|296134000|ref|YP_003641247.1| leucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032578|gb|ADG83346.1| leucyl-tRNA synthetase [Thermincola potens JR]
          Length = 822

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y      YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 30  RSKPKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKTMQGYNVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  N R+    L  SYD    + T    ++   + L+     +G  
Sbjct: 90  AIKHGVPPARWTLSNIENMRNQLKRLGFSYDWEREVTTCLPDYYKWTQWLFLLFYKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +         +++V  GA  +   AQ   V   E   +FF+++ Y D+LL
Sbjct: 150 YKKKSAVNWCPDCMTVLANEQVVNGA-CERCGAQ---VGKKELAQWFFKITDYADRLL 203



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 92/215 (42%), Gaps = 25/215 (11%)

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F  + + A L+    P    + + G +L  G K+SKS GNV+ P E++ + G D  R F+
Sbjct: 550 FAKVLYDAGLVGFEEPF-TNLLTQGMVLKDGAKMSKSKGNVVSPEEIVAKYGADTARLFI 608

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESD 387
           +      +D  +   G++         G    ++R   ++     G+  T      + +D
Sbjct: 609 LFAAPPERDLEWSDQGVE---------GAFRFLNRVWRLVYNYVSGLDDTAHVEEMSPAD 659

Query: 388 ESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
             +  +    ++ + +++  +   + A++ ++ +V+ + +Y D          N  R S 
Sbjct: 660 REMRRITHVTIKRVTDDISQRFNFNTAISAIMEMVNALYQYRD---------KNEKRNSA 710

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              V  E +  L +LL  F P +A +++  L   D
Sbjct: 711 ---VEAEAMNSLVLLLAPFAPHIAEELWHELGFTD 742


>gi|289675763|ref|ZP_06496653.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 313

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|71064940|ref|YP_263667.1| isoleucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|84029561|sp|Q4FUS5|SYI_PSYA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71037925|gb|AAZ18233.1| Isoleucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 941

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 17/134 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
           VW D+ T +      LD  D       PAD+++ G D  R    +  + L S  +   P 
Sbjct: 532 VWFDSGTTHFAV---LDQRDELTN---PADMYLEGSDQHR--GWFQTSLLTSEAMYERPP 583

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGF 340
            K+V +HGF++   G K+SKSLGN+I P E I + G D LR ++       E++ GK  F
Sbjct: 584 FKQVLTHGFVVDENGRKMSKSLGNIITPQEEINKTGADMLRLWIASSDYRYEMSAGKTVF 643

Query: 341 YDKDGLKKRVNADL 354
                + +R+   L
Sbjct: 644 KGSIDMYRRIRNTL 657



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK--AAQNAGVTTKVF 72
           Y N Q H+GHA   ++ D++ +   L G D  +  G D HG  I +   A++  V  KV 
Sbjct: 61  YANGQIHLGHAVNKVLKDIIVKSKTLSGFDAPYVPGWDCHGLPIEQKVEAKHGKVGQKVS 120

Query: 73  VDQNSRNFRDMADV-LDISYDDFIR 96
             +     R+ A   +++   DF R
Sbjct: 121 ATEFRGLCREYARTQIELQKADFKR 145


>gi|33861446|ref|NP_893007.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|48428530|sp|Q7V1I2|SYL_PROMP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634023|emb|CAE19348.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 858

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     AA 
Sbjct: 43  KEKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFQGKVVLHPMGWDAFGLPAENAAI 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +  QN  + +    +L +S D
Sbjct: 103 ERGINPDKWTKQNIAHMKSQLKLLGLSVD 131



 Score = 37.0 bits (84), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 30/181 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIG 359
           EK+SKS  N IDP  VI++ G D  R F++ +    KD  + D D            G  
Sbjct: 621 EKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDSD----------VEGQY 670

Query: 360 NLVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             + R   + L DY     T  A     E++ S+L   +  ++EI  +++N   + A+++
Sbjct: 671 RFLCRIWKLFL-DYSNNDITHEADKLKKENESSLLKSINIAIKEISNDIKNNQFNTAISE 729

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++   + +           L   N D       +  E + +  ILL  F P ++++I+ +
Sbjct: 730 LMKFYNSISS--------NLNYVNKD-------LRRESLMKFCILLAPFAPHISDEIWHL 774

Query: 477 L 477
           +
Sbjct: 775 I 775


>gi|327441141|dbj|BAK17506.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 921

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 523 IMDVWFDSGSSH---QGVL----VERGLKYPADLYLEGSDQHRGWFNSSLITSVAINGHA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF+L  +G K+SKSLGN IDPI+V+ + G D +R ++
Sbjct: 576 PY-KGLLTHGFVLDGEGRKMSKSLGNTIDPIKVMNQYGADIIRMWV 620



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   HIGHA   +I D++ R   + G  V +  G D HG  I +A
Sbjct: 46  KDRPHYLLHDGPPYANGDIHIGHALNKVIKDMINRQKSMSGFHVPYIPGWDTHGLPIEQA 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
             N GV  K   + +   FR++      + ++     F R            T K   + 
Sbjct: 106 LTNKGVKRK---EMSVAEFRELCEKYAYEQIENQKSQFRRLGVRGDWANPYITLKPEFEA 162

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ K+++KG IYKG    ++S   E+   + E+
Sbjct: 163 RQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEI 199


>gi|327403738|ref|YP_004344576.1| leucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319246|gb|AEA43738.1| leucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 961

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGYNVLHPMGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G    +  +QN   +RD  D +  S+  D  +RT+   ++   + ++K+I       
Sbjct: 90  IQTGQHPAITTEQNIARYRDQLDKIGFSFDWDREVRTSSPEYYKWTQWIFKQI------- 142

Query: 121 KGCYSGWYSL 130
              ++ WY++
Sbjct: 143 ---FNSWYNV 149



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/177 (19%), Positives = 78/177 (44%), Gaps = 33/177 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV  P E++E+ G D LR + +      +   +D  G+         +G+ N
Sbjct: 734 EKMSKSKFNVQTPDELVEKFGADTLRMYEMFLGPLEQTKPWDTKGI---------SGVHN 784

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  +D   +I T G+    D++ L    + ++++ ++++    +  ++ ++  
Sbjct: 785 FLRKLWRLFFED-GKLIVTEGSV---DKASLKTLHKTIKKVEDDLERYSFNTNVSTLMIC 840

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+E+       K                    EV+ QL +LL  + P  A ++++ +
Sbjct: 841 VNELTEQKCHSK--------------------EVLEQLVVLLAPYAPHTAEELWEAI 877


>gi|325911859|ref|ZP_08174263.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476365|gb|EGC79527.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 928

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|323141857|ref|ZP_08076718.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413604|gb|EFY04462.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 829

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 41/91 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 31  KDKPKSYVLEMFPYPSGNLHMGHVRNYSIGDVIARFRTMKGFNVLHPMGWDSFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A    +  K +  +N  N       L +SYD
Sbjct: 91  AIKHNIPPKKWTLENIANMTRQLKALGLSYD 121



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/233 (20%), Positives = 104/233 (44%), Gaps = 33/233 (14%)

Query: 255 FW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           +W P D ++ G +    H +Y   F        L+  + P    + + G ++  G K+SK
Sbjct: 529 YWGPVDQYIGGIEHAILHLLYSRFFVKVLRDAGLVDYDEPF-SNLLTQGMVIKDGAKMSK 587

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+ P E++ + G D  R F++      ++  +   G++        N I  +V   
Sbjct: 588 SLGNVVSPEEILSKYGADTARLFILFAAPPERELEWSDQGVEGSFR--FLNRIWRIVQAF 645

Query: 366 VSMI---LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++   + +YD         +E+D+ +  V    ++++  +++ +   + A++ ++ LV
Sbjct: 646 EAVLAQKVTEYDH-----SNLSEADKDLRRVLHSSIKKVTNDIETRFNFNTAISTMMELV 700

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +  Y +A K        P+       +  E I  L  ++  FVP +  +++
Sbjct: 701 NALYAYKEAAK-------EPNAG-----LVYEAISDLIKMMSPFVPHITEELW 741


>gi|302335574|ref|YP_003800781.1| valyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319414|gb|ADK67901.1| valyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 900

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 49/247 (19%)

Query: 203 GLKDLSLSRKTFDWGIKIP----DDPQY------------------------IMYVWIDA 234
           GLKD  +SR+ + WG +IP    +D  +                        ++  W  +
Sbjct: 395 GLKDWCISRQLW-WGHRIPVFYCEDCGWQDALMEDTGTCPNCGGHHVHQDEDVLDTWFSS 453

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KK 289
                 T G+ D+     A+  P  + V  +DI+      W A ++ ++L     +P + 
Sbjct: 454 QLWTFATQGWPDDAT-ELAQHHPTKVLVTARDIIAL----WVARMIMSSLYFTGEIPFRD 508

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           V+ +  IL K G ++SKS GN ++P++++E  G DA+R+ L+  I   +D  +D + + K
Sbjct: 509 VYIYATILAKDGSRMSKSKGNGVNPMDLMERYGADAMRFNLLTLITNNQDVKFDAN-IDK 567

Query: 349 RVNA-------DLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQE 400
           + +A       + A      +  +   +  + DG  P  P A T  D  +LS  +R++ E
Sbjct: 568 KTHALIDSPRTEQARSFVTKIWNASRFVQMNLDGYAPGEPKAETPEDAWMLSRLARIVDE 627

Query: 401 IRENMQN 407
             E ++ 
Sbjct: 628 ATEALEG 634


>gi|110005313|emb|CAK99637.1| leucyl-trna synthetase protein [Spiroplasma citri]
          Length = 805

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K YI     YP+ A  H+GH    +  DV++R  +L G DVL   G D  G    + A
Sbjct: 29  EQKAYILDMFPYPSGAGLHVGHPKGYVATDVISRMRKLQGYDVLHPIGWDAFGLPAEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
              G     F  QN  NFR+    L  SYD    + T+      T +++++ +   G
Sbjct: 89  LQTGNNPAEFTLQNIANFRNQLKALGFSYDYEKEVNTSSPEFFKTTQLIFELLYQNG 145



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 8/83 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-PLPK---KVFSHGFILHK-GEKISK 305
           K+ P DL+V G++    H +Y   W  FL    L P  +   K+ + G IL   G K+SK
Sbjct: 526 KWLPVDLYVGGQEHAVLHLLYSRFWHKFLYDQKLVPTSEPFYKLVNQGMILGTDGSKMSK 585

Query: 306 SLGNVIDPIEVIEEVGVDALRYF 328
           S GNVI+P ++I+  G D LR +
Sbjct: 586 SKGNVINPDDIIKSHGADTLRLY 608


>gi|298369470|ref|ZP_06980787.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282027|gb|EFI23515.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 930

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 45/278 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEI 648

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGA-FTESDESILSVCSRV 397
                   +R+   L+    N         L D+D    T P A   E D   L V +R 
Sbjct: 649 LKRVTESYRRIRNTLSFLFAN---------LSDFDPFEHTVPQADMVEIDRYAL-VLARQ 698

Query: 398 LQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRAS 445
           LQE    +       H A+  +++  SE           DR +  +     +++    A 
Sbjct: 699 LQERLAGDFYPRYAFHFAVKDIVAFCSEDLGAFYLDILKDRLYTTKADSHARRS----AQ 754

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 755 TALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 789



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|256810860|ref|YP_003128229.1| valyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794060|gb|ACV24729.1| valyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 878

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 25/279 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +  T +LD+ +  K K +P  L   G DI+R  A Y    +  L+   
Sbjct: 451 VLDTWMDSSITPMVITKWLDDDEFFK-KHYPVQLRPQGHDIIRTWAFYTIVKSIALTGKK 509

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +    +      F  K+
Sbjct: 510 PWDEIVINGMVFGEDGHKMSKSRGNVVEPDEIIAKYGADALRLWASNSVIGDDVPFLWKE 569

Query: 345 G------LKKRVNADLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTES-DESILSVCSR 396
                  L+K  NA           R   M I  D    +  P   +   D  ILS   R
Sbjct: 570 VDYGYRFLRKFWNA----------CRFAKMHISDDIIDELKKPMEISNPIDLWILSKLQR 619

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ +  +++N   +  + ++   V     D Y +  K + L   + +      +    V
Sbjct: 620 LIERVDRDLENYRFN-TIVEIYKFVWHEFCDNYIEMVK-YRLYGNDEEAKKEARWTLYYV 677

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           I +L  LL  F P  ++ + +I  + + +  F  +D++L
Sbjct: 678 IDKLVRLLCPFAPHFSDYMAEIYKIDNLHFSFPEVDKKL 716



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG       +     
Sbjct: 38  IDTPPPYPTGRLHLGHALNWTYMDIIARYKRMKGFNVLFPQGWDCHGLPTEVKVEEIYGI 97

Query: 69  TKVFVDQNSRNFRDMA 84
           TK  VD++   FR++ 
Sbjct: 98  TKSDVDRHK--FRELC 111


>gi|78776936|ref|YP_393251.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497476|gb|ABB44016.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 875

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 39/266 (14%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---------FWPADLHVIGKDILRF 270
           I  DP  ++  W  +     +T G+  N D S  K         F+P  L + G DIL F
Sbjct: 442 ISQDPD-VLDTWFSSALWPFSTLGW-GNGDASMDKLFSSQDMKDFYPNSLLITGFDILFF 499

Query: 271 HAIYWPAFLLS------ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVD 323
               W A ++         LP    ++ H  +  + G+K+SKS GNVIDP++++E+   D
Sbjct: 500 ----WVARMMMMGESFVGELPF-NHIYLHALVRDEHGQKMSKSKGNVIDPLDMVEKYSAD 554

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR+ L    A G+D     D L++  N +  N + N    +   +  + D      G  
Sbjct: 555 ILRFTLAISAAQGRDIRMSTDKLEQ--NRNFTNKLYN----AAKFLQMNVDTFPDLKGFC 608

Query: 384 TES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            ES     +LS  +   QE+R  M     + A   +   +   + + D    W ++ +  
Sbjct: 609 VESPLGRYMLSRLNVATQEVRSCMDEYRFNDAATVLYRFL--WNEFCD----WGIELSKA 662

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVP 467
           D+ S V      + ++   LL  F+P
Sbjct: 663 DKGSIVELGA--IFKESMKLLHPFMP 686



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QK 57
           + E    S  +  PN   + HIGHA    + D++ R+ R+DG   L+  GTD  G   Q 
Sbjct: 33  QEEGKNFSIMMPPPNVTGRLHIGHALTFTLQDIITRYKRMDGYKTLWQPGTDHAGIATQN 92

Query: 58  IAKAAQNAGVTTK 70
           + +    A  TTK
Sbjct: 93  VVEKQLLAEGTTK 105


>gi|121602503|ref|YP_988986.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|121602738|ref|YP_988955.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614680|gb|ABM45281.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614915|gb|ABM45516.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 908

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 20/276 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +K+  D Q ++  W  +     +T G+  +       F+P  L V G DI+ F    W A
Sbjct: 470 VKLTRD-QDVLDTWFSSALWPFSTLGW-PHKTNELTTFYPTSLSVTGFDIIFF----WVA 523

Query: 278 FLLS------ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            ++         +P P  V+ H  +    G K+SKS GN++DP+E+I++   DALR+ L 
Sbjct: 524 RMMMMGIHFMGEVPFPI-VYVHALVRDAHGAKMSKSKGNIVDPLELIDQYSADALRFTLA 582

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G+D   D   +    N   A  + N  +R   +    +D            +  I
Sbjct: 583 IMAAQGRDVKLDPSRIAGYRN--FATKLWN-AARFAEINNVKHDLAFKPEQTKLAFNRWI 639

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVL 448
           L+  S+ +  +  +++N   + A + +   +  +  D Y +  KP   +  + D      
Sbjct: 640 LTELSKTVSIVTSSIENYKFNEAASALYRFIWNALCDWYLEFLKP-IFQGGDEDSKKEAQ 698

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
             T  V+ ++  LL  F+P +  +++ +  +    R
Sbjct: 699 ACTAWVLDEVYKLLHPFMPHITEELWSLTAMPGTKR 734



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D++ RF R+ G +VL+  G D           +AG+ T++ V++     
Sbjct: 52  HMGHALNATIQDIMVRFQRMHGKNVLWQPGMD-----------HAGIATQMVVERQLAE- 99

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           R      ++  + FI    K  H+   ++  ++   G
Sbjct: 100 RQEPTRQEMGREKFIERVWKWRHEAGNVISSQLRRLG 136


>gi|268325101|emb|CBH38689.1| valyl-tRNA synthetase [uncultured archaeon]
          Length = 810

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 31/245 (12%)

Query: 254 KFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           K +P  L   G DI+ F          L    +P  K V  +GF+L  K  K+SKS GNV
Sbjct: 479 KIYPMSLRSNGHDIITFWLFNTVVKGLLHENQIPW-KDVIINGFVLDPKKAKMSKSKGNV 537

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I P  VIE    DALR++       G+D  Y++  +++ V   + N + N  S+   + L
Sbjct: 538 IQPQGVIERYSADALRFWAC-SAKLGEDLPYEEKEIRRGVK--IVNKLWN-ASKFALLHL 593

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQE------------IRENMQNQLIHRALAQVI 418
           + Y+  +         D+ +LS  +R++ E            ++++M+N   H      +
Sbjct: 594 EGYN--LNNECELELMDKWLLSKLNRLIGECTASFNEYEFSTVKKDMENFFWHTFCDSYL 651

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V   DR ++ ++  E K++    A   LYV++  + ++   +Q   P +  +I+   F
Sbjct: 652 EIVK--DRLYNPERGEEAKRS----AQYTLYVSLLAMLKMMAPIQ---PHITEEIYHAYF 702

Query: 479 VADEN 483
              EN
Sbjct: 703 ADREN 707



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 28/168 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA   I AD + RF R+ G ++ +  G D           N G+ T+++V++ +   
Sbjct: 51  HIGHAMAYIQADTIMRFQRMQGKNIFYPFGFD-----------NNGLATELYVEKKTGK- 98

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRIL---WKK--ISDKGDIYKGCYSGWYSLRDEAY 135
             MA+  ++S  DFI    K      + +   WK   IS   DI     + W     +  
Sbjct: 99  --MAE--EMSRQDFIELCLKESEIAAQRMLEDWKSLGISPDWDITYRTINKWSRKTSQRS 154

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--SYYE 181
           +    +    +G+ Y  +H P  W  + G        +DK L  S+Y+
Sbjct: 155 F----ILLHNNGRAYR-KHEPTVWCSKCGTAIAQVESEDKTLPSSFYD 197


>gi|261365368|ref|ZP_05978251.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566158|gb|EFC87718.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 930

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 45/278 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDG 339
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +        E+A  K+ 
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEI 648

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGA-FTESDESILSVCSRV 397
                   +R+   L+    N         L D+D    T P A   E D   L V +R 
Sbjct: 649 LKRVTESYRRIRNTLSFLFAN---------LSDFDPFEHTVPQADMVEIDRYAL-VLARQ 698

Query: 398 LQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRAS 445
           LQE    +       H A+  +++  SE           DR +  +     +++    A 
Sbjct: 699 LQERLAGDFYPRYAFHFAVKDIVAFCSEDLGAFYLDILKDRLYTTKADSHARRS----AQ 754

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           T LY    + R L +L+   +     + +DI+   +E+
Sbjct: 755 TALY---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 789



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|163794895|ref|ZP_02188864.1| Isoleucyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
 gi|159179714|gb|EDP64241.1| Isoleucyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
          Length = 936

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I  VW D+ +   T T  L+N PD +    WPA L++ G D  R  FH+    +      
Sbjct: 540 ICDVWFDSGS---THTFVLENDPDLA----WPASLYLEGSDQHRGWFHSSLLESCGTRGR 592

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P    V +HGF+L + G K+SKSLGNV  P EV+++ G D LR ++V
Sbjct: 593 APY-DAVLTHGFVLDQDGRKMSKSLGNVTAPQEVMDKYGADILRLWVV 639



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   I+ DV+ R   + G  + +  G D HG  I
Sbjct: 49  REKFILHDGPPYANGHLHIGHALNKILKDVINRSQHMAGKQIAYVPGWDCHGLPI 103


>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785521|ref|YP_091350.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825316|sp|Q65JV7|SYI_BACLD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348023|gb|AAU40657.1| IleS [Bacillus licheniformis ATCC 14580]
 gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 922

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 53/312 (16%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR----NFRDMADVLDISYDDFIRT 97
           GLDVL     DE G   ++A    G+    F DQ ++       +   +L +   DFI  
Sbjct: 341 GLDVL--CPVDEKGHMTSEAPGFEGL----FYDQANKPITEQLEEKGALLKL---DFI-- 389

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADGQYYN 151
           T    HD     W+  + K  I++     + S++D      EA      V +  + + YN
Sbjct: 390 THSYPHD-----WR--TKKPTIFRATAQWFASIKDFRDELLEAVKKTKWVPEWGETRLYN 442

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              +   W        R  A+   +  +Y  + E I+  E  N V    +    ++   +
Sbjct: 443 MIRDRGDWC-----ISRQRAWGVPIPVFYAENGEPIITDETINHVSELFREHGSNIWFEK 497

Query: 212 KTFDW---GIKIPDDP-------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           +  +    G   P  P       Q IM VW D+ +++          +  +    PADL+
Sbjct: 498 EANELLPEGFTHPGSPNGKFTKEQDIMDVWFDSGSSHQAVL------EEREDLVRPADLY 551

Query: 262 VIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIE 318
           + G D  R  F++    A  ++   P  K V SHGF L  +G K+SKSLGNV+ P +++ 
Sbjct: 552 LEGSDQYRGWFNSSISTAVAVTGKAPY-KGVLSHGFALDGEGRKMSKSLGNVVVPAKIMN 610

Query: 319 EVGVDALRYFLV 330
           + G D LR ++ 
Sbjct: 611 QFGADILRLWVA 622


>gi|257452605|ref|ZP_05617904.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 931

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 27/167 (16%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW------------GIKIPDDPQY 226
           Y E   E I   +  N VISFV+    D  L   + +             GI +  +   
Sbjct: 473 YNEETGEEIFNQDILNHVISFVEKEGSDAWLLHTSEELIGEENLKKYHLEGISLRKETN- 531

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           IM VW D+ +++      L+  +G +   WPADL++ G D    H  ++   LL++    
Sbjct: 532 IMDVWFDSGSSHRAV---LETWEGLR---WPADLYLEGSDQ---HRGWFQTSLLTSVGSR 582

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +   KK+ +HGF+   KGEK+SKS GNV+ P ++I++ G D LR +
Sbjct: 583 GVAPFKKILTHGFVNDGKGEKMSKSKGNVVAPEKIIKQYGADILRLW 629



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K +E   +     Y N   HIGHA   I+ D++ ++  L G    +  G D HG  I  K
Sbjct: 46  KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADV-----LDISYDDFIR 96
             +  G   K   D  +   R +        +DI  ++FIR
Sbjct: 106 VMEKLGSKAK---DMTALEIRQLCKEYALKWVDIQREEFIR 143


>gi|254468518|ref|ZP_05081924.1| isoleucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087328|gb|EDZ64611.1| isoleucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 923

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T + +     DN +      +PADL++ G D  R  F +    A  +S   P  
Sbjct: 535 VWFDSGTTHESVLKTNDNLN------YPADLYLEGSDQHRGWFQSSLLTASAISGQAPY- 587

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF++  +G+K+SKS GNVI P +++++ G D LR+++ 
Sbjct: 588 KALLTHGFVVDGQGKKMSKSKGNVIAPQKIMDQYGADILRFWVA 631



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 28/62 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K  +     Y N   HIGHA   ++ D++ +   L   D  +T G D HG  I  A
Sbjct: 48  KGKPKFILHDGPPYANGNIHIGHAVNKVLKDIIVKSKGLSDYDAPYTPGWDCHGLPIELA 107

Query: 62  AQ 63
            +
Sbjct: 108 IE 109


>gi|188997007|ref|YP_001931258.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|259511518|sp|B2V9T1|SYI_SULSY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188932074|gb|ACD66704.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 939

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 12/111 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SA 282
           I+ VW D+  ++     Y +  +      WPAD+++ G D    H  ++ + LL    S 
Sbjct: 531 ILDVWFDSGVSHAAVLKYGEWEELR----WPADMYLEGSDQ---HRGWFQSSLLESVASY 583

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           N      V +HGF L  KG K+SKS GNV+ P +VI+E G D LR ++V E
Sbjct: 584 NRAPYDTVLTHGFTLDEKGRKMSKSAGNVVAPEKVIKEYGADILRLWVVTE 634



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K  +     Y N   HIGHA   I+ D+L ++  + G D  F  G D HG  I +
Sbjct: 45  KGKDKYILHDGPPYANGHIHIGHALNKILKDILVKYQSMKGKDAPFVPGWDCHGLPIEQ 103


>gi|114707214|ref|ZP_01440112.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Fulvimarina
           pelagi HTCC2506]
 gi|114537410|gb|EAU40536.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Fulvimarina
           pelagi HTCC2506]
          Length = 965

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 19/257 (7%)

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+  + P+    K++P  +     DI+ F    W A ++   L 
Sbjct: 538 VLDTWFSSALWPFSTMGWPHETPE--MEKYYPTSVLSTAFDIIFF----WVARMMMMGLH 591

Query: 286 LPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
              K     V+ H  +  K G+K+SKS GN IDP+++IEEVG DALR+ L      G+D 
Sbjct: 592 FTGKEPFHTVYMHPLVRDKFGQKMSKSKGNGIDPLDLIEEVGADALRFTLAALAVQGRDV 651

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             D   +    N      + N  +R   M    +   I         +  I++  S+  +
Sbjct: 652 KLDPARVAGYRN--FCTKLWN-ATRFAQMNEAKHGVDIEPASLQLPINRWIVTELSKAEK 708

Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E    ++    + A A +   V  +  D Y +  KP  L   + D A  V  VT  V+ +
Sbjct: 709 EATAALEAYRFNDAAAILYRFVWNLFCDWYVELTKP-TLNGEDADAAGEVRVVTGFVLDR 767

Query: 458 LAILLQAFVPKLANKIF 474
           + +LL  F+P +  +++
Sbjct: 768 IFVLLHPFMPFITEELW 784



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+L RF R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERQ 96


>gi|14521851|ref|NP_127327.1| valyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|12585356|sp|Q9UY55|SYV_PYRAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|5459071|emb|CAB50557.1| valS valyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 891

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 17/263 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  +AK W     P  L   G DI+R  A Y  +  F
Sbjct: 453 VLDCWVDSSITPLIITRWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTF 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 KLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTAL-APPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D  ILS   R++
Sbjct: 572 HPFKWETVD--YNFRFLQKVWN-IYRFAERHIKDFDYEKYKDIELEPLDRWILSRLHRII 628

Query: 399 QEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +   E ++     LI R L   I      D Y +  K + L   + +          E++
Sbjct: 629 KFATEELERYRFNLITRELMTFI-WHEVADDYIEMVK-YRLYGDDEESKLKAKVALYELL 686

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             + +LL  FVP +  +I+  +F
Sbjct: 687 YNVMLLLAPFVPHITEEIYHAMF 709



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV 67
          I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG     K  +  G+
Sbjct: 38 IDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELKVEKEFGI 97

Query: 68 T 68
          T
Sbjct: 98 T 98


>gi|238855265|ref|ZP_04645584.1| isoleucine-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664624|ref|ZP_05865476.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932442|ref|ZP_06337867.1| isoleucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313471916|ref|ZP_07812408.1| isoleucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832157|gb|EEQ24475.1| isoleucine-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529158|gb|EEQ68159.1| isoleucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561689|gb|EEX27661.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303391|gb|EFA95568.1| isoleucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 930

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PADL++ G D  R  F++    +  +S + P  K V S GF+L  KG K+SKSLGNVI 
Sbjct: 549 YPADLYLEGSDQYRGWFNSSLITSVAVSGHAPY-KSVLSQGFVLDDKGHKMSKSLGNVIS 607

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +VI+++G + +R ++ 
Sbjct: 608 PNDVIKQMGAEIIRLWVA 625



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           + N   H+GH+   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVDRKTMDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         +D+   +F+ +  + D  +  +I    K   +  R+   K+ +KG 
Sbjct: 118 AEYRELCRKYAMEQIDKQRTDFKRLGVMADWDH-PYITLQPKFEAEEIRVF-GKMFEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + EV
Sbjct: 176 IYKGLKPVYWSPSSESTLAEAEV 198


>gi|261856811|ref|YP_003264094.1| isoleucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837280|gb|ACX97047.1| isoleucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 985

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + T        D      WPADL++ G D  R  F +       L    P  
Sbjct: 578 VWFDSGVTHATVL------DRRPELTWPADLYLEGSDQHRGWFQSSLLTGVALKGAAPY- 630

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF +  +G K+SKSLGNV+ P +VI+++G D LR ++ 
Sbjct: 631 RGVLTHGFTVDAQGRKMSKSLGNVVAPQKVIDKMGADVLRLWVA 674



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   ++ D++ +  +L G D  +  G D HG  I
Sbjct: 95  RPKFVLHDGPPYANGDIHIGHAVNKVLKDMIVKSKQLAGFDAPYVPGWDCHGLPI 149


>gi|19074278|ref|NP_585784.1| LEUCYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621204|sp|Q8SRS8|SYLC_ENCCU RecName: Full=Probable leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|19068920|emb|CAD25388.1| LEUCYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 874

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 14/114 (12%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILH 298
           L N   S   F+P DL V GKD+L+ H I    F L  ++ L      PK++F++G ++ 
Sbjct: 485 LSNCRESFNYFYPIDLRVGGKDLLKNHLI----FFLFNHVALFEEKHWPKRMFTNGHLML 540

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             EK+SKS GN +   E +++ GV + R  L     CG DG  D + ++   NA
Sbjct: 541 NSEKMSKSSGNYMTVDESLDKFGVSSTRMCLA---VCG-DGNEDANFVESNANA 590



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 32/63 (50%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          + E+ K +++    Y N + H+GH + +  AD  + +  L G +VLF       G  I+ 
Sbjct: 23 VSEKRKFFVTFTYPYMNGRLHLGHLFSISKADFFSYYKELQGYNVLFPFSFHCTGMPISA 82

Query: 61 AAQ 63
          +A+
Sbjct: 83 SAK 85


>gi|309809437|ref|ZP_07703295.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170109|gb|EFO72144.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 928

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|309805561|ref|ZP_07699606.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165212|gb|EFO67450.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 928

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGQA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|170016895|ref|YP_001727814.1| isoleucyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803752|gb|ACA82370.1| Isoleucyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 930

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   + T   LD         +PADL++ G D  R  F++    +   +
Sbjct: 526 IMDVWFDSGSSWAGVMNTRNQLD---------YPADLYLEGSDQYRGWFNSSLITSVAAT 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K V S GF L  KG K+SKSLGN I P+ V +++G++ LR + +
Sbjct: 577 GHAPY-KNVLSQGFTLDGKGNKMSKSLGNTISPLAVADQMGIEILRLWTI 625



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQLTKAGHDRKSMPK 117

Query: 75  QNSRNF-RDMADV-LDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
              RN  +D A   +D   +DF R            T +   +  ++ ++ +++ KG I+
Sbjct: 118 AAWRNLAKDFALAQVDKQRNDFKRLGIMADWQHPYITLQPEFEAAQVRVFGEMAGKGYIF 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGSKPVYWSWSSESALAEAEI 198


>gi|163742256|ref|ZP_02149644.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161384586|gb|EDQ08967.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 982

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 60/245 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSGL----KDLSLS 210
           VQW  + G        +++L S  ES P+++L  +R   V    F K GL     D  L 
Sbjct: 493 VQWTPQTG--------RNRLYSMIESRPDWVLSRQRAWGVPLTCFTKKGLLPTDPDFLLR 544

Query: 211 RKTFD--------------W-----------GIKIPDDPQYI---MYVWIDALTNYLTTT 242
            +  +              W           GI  PDD   +   + VW D+ + +    
Sbjct: 545 NEELNTRIVAAFEEHGADVWYTDGFKDKMLDGIANPDDYDQVFDVLDVWFDSGSTHAFV- 603

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
              D  DG++     AD+++ G D  R  FH+    A       P  + V +HGF L  K
Sbjct: 604 -LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSLLQACGTKGRAPY-RNVVTHGFTLDEK 659

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN I P +++++ G D LR ++ +         Y  D   +R+ A++  G+ 
Sbjct: 660 GNKMSKSLGNTIVPEKIVQQYGADILRLWVAQTD-------YTAD---QRIGAEILKGVA 709

Query: 360 NLVSR 364
           +   R
Sbjct: 710 DGYRR 714



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 10/102 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           ER+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I    
Sbjct: 61  ERKSFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKI 120

Query: 60  -----KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                K  +N      V   Q  R F D  + + I  ++F R
Sbjct: 121 EEQYRKKGKNKDEVPVVDFRQECRAFAD--EWVGIQREEFKR 160


>gi|149377782|ref|ZP_01895515.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357954|gb|EDM46443.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 939

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 16/169 (9%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  ++   P  K+V +HGF +  KG K+SKSLGNVI P
Sbjct: 558 PADMYLEGSDQHRGWFQSSLKTSIAMNGVAPY-KQVLTHGFTVDGKGRKMSKSLGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV+ E+G D LR ++      G +    KD LK+   AD    I N    +   +L + 
Sbjct: 617 QEVMNELGADILRLWVSATDYSG-EMTVSKDILKQ--TADGYRRIRN----TARFLLSNL 669

Query: 374 DGMIPTPGAFTESDESILS--VCSRVLQ---EIRENMQNQLIHRALAQV 417
            G  P   A    D   L   +  + LQ   E+ E+ QN    R   +V
Sbjct: 670 TGFDPEQHAVAPEDMIALDRWMVDKALQLQKELHEDYQNYAFLRIYQKV 718



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           REK  +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I  K  
Sbjct: 48  REKFILHDGPPYANGSIHIGHAVNKILKDMIVKSRSFMGYDAPYVPGWDCHGLPIEHKVE 107

Query: 63  QNAGVTTKVFVDQNSRNFR 81
           Q  G   K  V  + + FR
Sbjct: 108 QEIG---KAGVKVDYKTFR 123


>gi|114586465|ref|XP_001147524.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|114586467|ref|XP_001147676.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 3 [Pan
           troglodytes]
 gi|114586469|ref|XP_001147749.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 4 [Pan
           troglodytes]
          Length = 903

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D       V  D   G+  
Sbjct: 638 EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-------VKTDALPGVLR 690

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--------SVCSRVLQEIRENMQNQ 408
               L + +   I     G  P P   +  +++          SV S+V     E+    
Sbjct: 691 WQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFS-- 748

Query: 409 LIHRALAQVISLVSEVDR 426
            ++ A++Q++ L + + +
Sbjct: 749 -LNSAISQLMGLSNALSQ 765


>gi|84029518|sp|Q5HB43|SYI_EHRRW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1117

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + + +    ++  F+LS  L   P  K    HG +L  +G+K+SK L N 
Sbjct: 598 YFPADF--ITEYVAQTRGWFYTLFVLSTALFDKPPFKNCICHGVVLDTQGQKLSKRLNNY 655

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+E+ ++ G DA+R+ ++   ++ G D   DKDG+  R
Sbjct: 656 ADPMEIFKQYGSDAMRFLMLSHTVSYGGDLLLDKDGVMVR 695


>gi|257466462|ref|ZP_05630773.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 931

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 27/167 (16%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW------------GIKIPDDPQY 226
           Y E   E I   +  N VISFV+    D  L   + +             GI +  +   
Sbjct: 473 YNEETGEEIFNQDILNHVISFVEKEGSDAWLLHTSEELIGEENLKKYHLEGISLRKETN- 531

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           IM VW D+ +++      L+  +G +   WPADL++ G D    H  ++   LL++    
Sbjct: 532 IMDVWFDSGSSHRAV---LETWEGLR---WPADLYLEGSDQ---HRGWFQTSLLTSVGSR 582

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +   KK+ +HGF+   KGEK+SKS GNV+ P ++I++ G D LR +
Sbjct: 583 GVAPFKKILTHGFVNDGKGEKMSKSKGNVVAPEKIIKQYGADILRLW 629



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K +E   +     Y N   HIGHA   I+ D++ ++  L G    +  G D HG  I  K
Sbjct: 46  KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADV-----LDISYDDFIR 96
             +  G   K   D  +   R +        +DI  ++FIR
Sbjct: 106 VMEKLGSKAK---DMTALEIRQLCKEYALKWVDIQREEFIR 143


>gi|242310404|ref|ZP_04809559.1| isoleucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522802|gb|EEQ62668.1| isoleucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 912

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
            +I+ VW D+ + +       +   GS    +PAD+++ G D  R  FH+    +  ++ 
Sbjct: 524 HHILDVWFDSGSTWKAVLKSENYRSGS----YPADMYLEGSDQHRGWFHSSLLVSCAVNE 579

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P  K + +HGF +   GEK+SKS GNVI P EV++E G + LR ++ 
Sbjct: 580 KAPY-KSILTHGFTMDENGEKMSKSKGNVIVPKEVLKEFGSEILRLWVA 627



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 20/103 (19%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ +FH   G  V +T G D HG        +K+ K  +++ 
Sbjct: 44  YANGHLHIGHALNKILKDIIVKFHYFQGKKVFYTPGWDCHGLPIEQQVEKKLGKEKKDSL 103

Query: 67  VTTKV----------FVDQNSRNFRDMADVLDISYDDFIRTTE 99
             TK+          FV+     F ++  + D  +D+  +T E
Sbjct: 104 PKTKIRELCRKHAQEFVEIQKNEFLELGVIGD--FDNPYKTME 144


>gi|108563921|ref|YP_628237.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373647|sp|Q1CR59|SYL_HELPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|107837694|gb|ABF85563.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 806

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAITP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|312874547|ref|ZP_07734572.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921150|ref|ZP_08277672.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311089938|gb|EFQ48357.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|328934788|gb|EGG31279.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 928

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|303389510|ref|XP_003072987.1| leucyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302131|gb|ADM11627.1| leucyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 873

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILH 298
           L N   S   F+P DL V GKD+L+ H I    F L  ++ L      P+++F++G+++ 
Sbjct: 485 LSNCRKSFNYFYPVDLRVSGKDLLKNHLI----FFLFNHVALFEKKHWPRRIFTNGYLML 540

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN-- 356
             EK+SKS GN +   E + + GV + R  L     CG D   D + ++   NA      
Sbjct: 541 NSEKMSKSSGNFLTVDESLAKFGVSSTRMCLA---VCG-DTNEDANFVESNANAFTLKLY 596

Query: 357 ---------GIGNLVSRSVSMILKDYDGM 376
                     IG   +  +  ++KDY+ M
Sbjct: 597 SYVKMIEELCIGKNFNPCILKLMKDYESM 625



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 34/63 (53%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          + +++K +++  I Y N + H+GH + +  AD  + +  L G +VLF       G  I+ 
Sbjct: 23 VSKKQKFFVTFPIPYMNGRLHLGHLFSVSKADFFSYYKELQGYNVLFPFAFHCTGMPISA 82

Query: 61 AAQ 63
          +A+
Sbjct: 83 SAK 85


>gi|303327269|ref|ZP_07357711.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863257|gb|EFL86189.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 837

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 32  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARCKRMQGFNVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  N R     L  SYD    I T    ++   ++ + ++ +KG +Y
Sbjct: 92  IKHHVHPAQWTYANIDNMRAQLQRLGYSYDWSREIATCRPEYYRWEQMFFLRLLEKGLVY 151

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W         N+  +    DG  +      V+  +   +F +++AY D+LL+
Sbjct: 152 RKKAPQNWCPSCHTVLANEQVI----DGLCWRCDSR-VEQKDLTQWFLKITAYGDELLA 205



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 39/243 (16%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-KKVFSHGFILHKGEKI 303
           ++W P D ++ G +    H +Y   F            +L  P   + + G +L  G K+
Sbjct: 531 QYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGFFPKDLAEPFTNLLTQGMVLKDGGKM 590

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E+I++ G D +R F +      +D  +   G++         G    +S
Sbjct: 591 SKSKGNVVDPTEMIKKYGADTVRLFCLFAAPPERDFDWSDSGIE---------GASRFLS 641

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSR--------VLQEIRENMQNQL-IHRAL 414
           R   +  ++   ++P   A   S E   S  SR         +++  E+M  +   + A+
Sbjct: 642 RVWRLFTEEEARLLPL-KACGSSAEDADSGESRDLRRREHLTVKKAGEDMGGRFQFNTAI 700

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ LV+ +  Y   +K   L ++  +R      V    +  +  LL    P L  +++
Sbjct: 701 AAVMELVNAM--YLSREK---LGQSEAER-----RVFSSAMATVLTLLSPITPHLCEELW 750

Query: 475 DIL 477
           + L
Sbjct: 751 ERL 753


>gi|290476191|ref|YP_003469091.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175524|emb|CBJ82327.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 860

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYSNIEYMKAQLKTLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++AY ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDSQ-VERKEIPQWFIKITAYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEDWPEQVKTMQR 221


>gi|227890482|ref|ZP_04008287.1| leucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849051|gb|EEJ59137.1| leucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 804

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      E+D  +  V +  ++++ E+ +    + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQEKIVDENDGELDKVYAETVKKVTEDFEALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWIFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIIDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|225849332|ref|YP_002729496.1| isoleucine-tRNA ligase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643461|gb|ACN98511.1| isoleucine#tRNA ligase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 938

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 12/111 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SA 282
           I+ VW D+  ++     Y +  +      WPAD+++ G D    H  ++ + LL    S 
Sbjct: 530 ILDVWFDSGVSHAAVLKYGEWEELR----WPADMYLEGSDQ---HRGWFQSSLLESVASY 582

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           N      V +HGF L  KG K+SKS GNV+ P +VI E G D LR ++V E
Sbjct: 583 NRAPYDSVLTHGFTLDEKGRKMSKSAGNVVAPEKVINEYGADILRLWVVTE 633



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +EK  +     Y N   HIGHA   I+ D+L ++  + G D  F  G D HG  I +
Sbjct: 45  KGKEKYILHDGPPYANGHIHIGHALNKILKDILVKYQSMKGKDAPFVPGWDCHGLPIEQ 103


>gi|315303474|ref|ZP_07874061.1| leucyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628156|gb|EFR96702.1| leucyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 806

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 13/198 (6%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYEHGL 150

Query: 119 IYKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y+   +  W         N++ +   ++   +     P+ QWM       +++AY D+L
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGFPVFRKPMRQWM------LKITAYADRL 204

Query: 177 LSYYE--SHPEFILPIER 192
           L   E    PE I  ++R
Sbjct: 205 LDDLELVDWPENIKDMQR 222



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 51/239 (21%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNENGLEGSRKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           G L  +                   TE + ++     ++++ +  + +N   +  ++Q++
Sbjct: 641 GTLAEKVT-----------------TEPNANLEKAYHQMVKTVTNHYENLRFNTGISQLM 683

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++E  +     K                    E I     LL    P LA ++++IL
Sbjct: 684 IFINEAYKQPSIPK--------------------EYIEGFVQLLSPIAPHLAEELWEIL 722


>gi|254421177|ref|ZP_05034895.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188666|gb|EDX83630.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 868

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 5/182 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA  
Sbjct: 35  KKFYALSMFPYPSGDLHMGHVRNYTITDVVARVRRMQGYNVLHPMGWDAFGLPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  +N    RD    L +SYD    + T    ++   + ++ +  + G  Y+ 
Sbjct: 95  RGVPPADWTLKNIAQMRDQLKALGLSYDWNLEVATCLPNYYRWTQWIFLQFFESGLAYQK 154

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V   ++G+ + +    V+    + +FF+++ Y D+LL+  + 
Sbjct: 155 EAAVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERKLLKQWFFKITEYADQLLNDLDK 211

Query: 183 HP 184
            P
Sbjct: 212 LP 213



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 28/187 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N I PI V+E+ G D  R F++ +    KD  +D        +AD+  G   
Sbjct: 618 EKMSKSKFNGISPIAVLEKYGADTARMFILFKAPPEKDLEWD--------DADV-EGQYR 668

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVLQEIRENMQNQL---IHRALA 415
            ++R    +++           F +SD +  ++S   ++ Q      +  L    H A+ 
Sbjct: 669 FLNRVWRAVIE-----------FAQSDNAANLVSASDKIDQSTLNKAEKTLRRATHTAIK 717

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++   + E D  F+      +K +N   D       V  E I  L  L+  F P +A+++
Sbjct: 718 EITEDI-EGDYQFNTAVSELMKLSNAINDTKDKATPVFAEAICALVRLIAPFAPHIADEL 776

Query: 474 FDILFVA 480
           +  L ++
Sbjct: 777 WSALTIS 783


>gi|154685959|ref|YP_001421120.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154351810|gb|ABS73889.1| IleS [Bacillus amyloliquefaciens FZB42]
          Length = 921

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 575 KAPY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV 621



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTK 70
             +N  V  K
Sbjct: 105 LTKNKKVNRK 114


>gi|42518602|ref|NP_964532.1| leucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81668177|sp|Q74KS1|SYL_LACJO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|41582887|gb|AAS08498.1| leucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329666886|gb|AEB92834.1| leucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 804

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      E+D  +  V +  ++++ E+ +    + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQEKIVDENDGELDKVYAETVKKVTEDFEALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIIDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|312871879|ref|ZP_07731963.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874401|ref|ZP_07734431.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090013|gb|EFQ48427.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092601|gb|EFQ50961.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 928

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 920

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 575 QAPY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV 621



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 28/60 (46%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104


>gi|121602880|ref|YP_988442.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166230611|sp|A1UR39|SYL_BARBK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120615057|gb|ABM45658.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 875

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 8/187 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ + H+GH     + DV+AR+ R  G++VL   G D  G     AA
Sbjct: 32  EGEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGMNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V  K +  QN    R     L +S D   +F  T +  ++   ++++  +  KG +
Sbjct: 92  MQNKVHPKAWTYQNIAAMRKQLQKLGLSIDWSREFA-TCDVDYYHRQQMIFLDLYQKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V    DG+ + +    V+  E   +FF+++ + + LL+ 
Sbjct: 151 VRKVAKVNWDPVDQTVLANEQVI---DGRGWRS-GALVEQRELTQWFFKITEFGEGLLAR 206

Query: 180 YESHPEF 186
            +   E+
Sbjct: 207 LDDLTEW 213



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 7/117 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       A+    
Sbjct: 632 EKMSKSKKNVVDPDDIISSYGADTARWFMLSDSPPERDVIWSESGIEG------AHRFVQ 685

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            V R V++       + P  G   E+ E +     R L  + ++++    +RA+A++
Sbjct: 686 RVWRCVALSAPILSTIEPCAGHQGEALE-LSKAAHRTLCAVEDDLEKLAFNRAVARL 741


>gi|312622414|ref|YP_004024027.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202881|gb|ADQ46208.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 920

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 584 PY-RIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLHGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRN---FRDMADVLDISYDDFIRTTEKR 101
                V  K+ V+++  +   FR       +SY D  R   KR
Sbjct: 105 -----VIKKLGVNRHEIDPVEFRKKCKEFALSYIDIQRQQFKR 142


>gi|317153419|ref|YP_004121467.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943670|gb|ADU62721.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 942

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T+Y            ++ +F PADL++ G D  R  FH+    A + + ++
Sbjct: 535 ILDVWFDSGTSYAAVV-----EQRAETRF-PADLYLEGSDQHRGWFHSSLL-ASVGTRDV 587

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HG+++   G K+SKS+GNVI P E+I++ G + LR ++
Sbjct: 588 PPYKAVLTHGYVVDADGRKMSKSIGNVIAPQEIIDKFGAEILRMWV 633


>gi|322377200|ref|ZP_08051692.1| leucine--tRNA ligase [Streptococcus sp. M334]
 gi|321281913|gb|EFX58921.1| leucine--tRNA ligase [Streptococcus sp. M334]
          Length = 833

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|312127589|ref|YP_003992463.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777608|gb|ADQ07094.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 920

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 584 PY-RIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                   +  VD     FR       +SY D  R   KR
Sbjct: 105 VIKKFGVNRHEVD--PVEFRKKCKEFALSYIDIQRQQFKR 142


>gi|258646150|ref|ZP_05733619.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403533|gb|EEW97080.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 951

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +   T  G L +P          +P DL++ G D  R  FH+    +  ++
Sbjct: 543 IMDVWFDSGS---TWNGVLKDPHPVWKETGAAYPCDLYLEGSDQHRGWFHSSLLTSVAVN 599

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              P  K V +HGF +  +G K+SKS+GNV+ P ++I++ G D +R ++
Sbjct: 600 GCAPY-KAVLTHGFTMDGEGRKMSKSVGNVVAPQDIIDKYGADVMRLWI 647


>gi|240117059|ref|ZP_04731121.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240122697|ref|ZP_04735653.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240127398|ref|ZP_04740059.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 876

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   + ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|157828457|ref|YP_001494699.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933175|ref|YP_001649964.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166231640|sp|A8GS16|SYL_RICRS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083140|sp|B0BXI2|SYL_RICRO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157800938|gb|ABV76191.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908262|gb|ABY72558.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 835

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           N     K +   N +N +     +  SYD
Sbjct: 86  NNNSHPKKWTYSNIKNMKKQLKSMGFSYD 114


>gi|320330524|gb|EFW86503.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330873687|gb|EGH07836.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 868

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    ++    L ++ D    + T +  ++   + L  ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLLTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|169829674|ref|YP_001699832.1| leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688206|sp|B1HXY7|SYL_LYSSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168994162|gb|ACA41702.1| Leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 805

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 11/196 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K +      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFFALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++  KG  
Sbjct: 89  ALDTGNDPAEFTAKNIATFKRQIQELGFSYDWDREINTTDPAYYKWTQWIFIQLYKKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+L+ 
Sbjct: 149 YVDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLID 203

Query: 179 YYES--HPEFILPIER 192
             E    PE I  ++R
Sbjct: 204 DLEEVDWPESIKDMQR 219



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 19/192 (9%)

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFS 292
           T T  + +P+  K ++ P D+++ G +    H +Y   W   L    +   K    K+F+
Sbjct: 507 TNTEAIADPELLK-RWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFN 565

Query: 293 HGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G IL +G EK+SKS GNV++P E+IE  G D LR + +          +  +GL     
Sbjct: 566 QGMILGEGNEKMSKSKGNVVNPDEIIESHGSDTLRLYEMFMGPLEASVAWSTNGL----- 620

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
               +G    + R   +++ + DG I      ++ D+++     + ++++ E+ +    +
Sbjct: 621 ----DGARRFLDRIWRLLVNEEDGTISAKIQVSD-DKTLEKSYHQTVKKVTEDYEGIRFN 675

Query: 412 RALAQVISLVSE 423
            A++Q++  +++
Sbjct: 676 TAISQMMVFIND 687


>gi|321310936|ref|YP_004193265.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802780|emb|CBY93426.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 711

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 6/178 (3%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K YI     YP+ A  H+GH    +  D+ ARF ++ G  VL   G D  G    + A 
Sbjct: 32  KKFYILDMFPYPSGAGLHVGHVKGYLATDIWARFQKMKGYTVLHPMGWDAFGLPAEQYAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI-Y 120
             G +   F ++N  NFR     L + Y  D  I T++  ++   + ++ ++   G    
Sbjct: 92  QTGNSPIDFTNRNIDNFRKQCKRLMLFYDWDREINTSDPEYYKHTQWIFSQMYKHGLAEL 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
           K     W    +     D+E+  G DG+ Y+ + N  V   + + +  +++ Y D+LL
Sbjct: 152 KDSLVNWCEELNTV-LADEEIIVGDDGKRYSERGNYEVTSKKMKQWILKITEYADELL 208



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 245 LDNPDGSKA--KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHG 294
           LD+P+      ++ P D++V G++    H +Y   W  FL     +S   P  K +F+ G
Sbjct: 430 LDSPEAKDILRRWLPVDVYVGGQEHAAMHLLYARFWHKFLHKLGIVSTKEPF-KALFNQG 488

Query: 295 FILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +L   G K+SKS GN ++  E+I+  G D LR +
Sbjct: 489 MVLGSDGTKMSKSKGNYVNIDEMIDLYGADVLRLY 523


>gi|297565474|ref|YP_003684446.1| leucyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849923|gb|ADH62938.1| leucyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 875

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 8/185 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI     YP+   H+GH     + DVLARF    G  VL   G D  G     AA  
Sbjct: 32  KKSYILVMFPYPSGDLHMGHLKNYTMGDVLARFRTQQGYSVLHPFGWDAFGLPAENAALK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-K 121
            GV+   +   N +  ++   ++ I YD    + T    ++   + ++ K+ ++G  Y K
Sbjct: 92  FGVSPADWTFGNIQQSKESLALMGIQYDWSREVTTCTPEYYKWNQWIFLKMYERGLAYRK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y  W  +      N+  +    DG+ + +    V+  E E ++ +++ Y ++LL+  +
Sbjct: 152 KSYVNWDPVEQSVLANEQVI----DGRGWRSGAL-VEKRELEQWYLKITDYAERLLADLD 206

Query: 182 SHPEF 186
             P +
Sbjct: 207 KLPRW 211


>gi|268602746|ref|ZP_06136913.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681295|ref|ZP_06148157.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685772|ref|ZP_06152634.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268586877|gb|EEZ51553.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268621579|gb|EEZ53979.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626056|gb|EEZ58456.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 878

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   + ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|169837106|ref|ZP_02870294.1| Valyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 553

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+ D  PD    KF+P +  V G DIL F         L  N  
Sbjct: 397 VLDTWFSSALWPFSTLGWPDKTPD--LEKFFPTNALVTGADILFFWVARMVMMSLYINDE 454

Query: 286 LP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +P   V+ HG I  + G K+SKSLGN  DP+++I + G DA+R+  +   + G+D
Sbjct: 455 IPFSYVYLHGIIRDELGRKMSKSLGNSPDPLDLIAKYGADAIRFSFLYNTSQGQD 509


>gi|108761325|ref|YP_632907.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465205|gb|ABF90390.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 831

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+   + YP+ + H+GH    ++ DV AR+ R+ G DVL   G D  G     AA   
Sbjct: 34  KKYVLEMLPYPSGKMHMGHVRNYLLGDVYARYFRMKGFDVLHPMGWDALGLPAENAAIKD 93

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           GV   V   +N  +F+     L   Y  D  + T++  ++   +  + ++ ++G +Y+
Sbjct: 94  GVHPAVRTAENIASFKKEIKSLGYCYDWDREVNTSDPEYYRWNQWFFIQMLERGLVYR 151


>gi|93005232|ref|YP_579669.1| isoleucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92392910|gb|ABE74185.1| Isoleucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 947

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 17/134 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
           VW D+ T +      LD  D       PAD+++ G D  R    +  + L S  +   P 
Sbjct: 539 VWFDSGTTHFAV---LDQRDELTN---PADMYLEGSDQHR--GWFQTSLLTSEAMYERPP 590

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGF 340
            K+V +HGF++   G K+SKSLGN+I P E I + G D LR ++       E++ GK  F
Sbjct: 591 FKQVLTHGFVVDENGRKMSKSLGNIITPQEEINKTGADMLRLWIASSDYRYEMSAGKTVF 650

Query: 341 YDKDGLKKRVNADL 354
                + +R+   L
Sbjct: 651 KGAIDMYRRIRNTL 664



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK--AAQNAGVTTKVF 72
           Y N Q H+GHA   ++ D++ +   L G D  +  G D HG  I +   A++  V  KV 
Sbjct: 68  YANGQIHLGHAVNKVLKDIIVKSKTLSGFDAPYVPGWDCHGLPIEQKVEAKHGKVGQKVS 127

Query: 73  VDQNSRNFRDMADV-LDISYDDFIR 96
             +     R+ A   +++   DF R
Sbjct: 128 ATEFRGLCREYASTQIELQKADFKR 152


>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 921

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 575 KAPY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV 621



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTK 70
             +N  V  K
Sbjct: 105 LTKNKKVNRK 114


>gi|194097598|ref|YP_002000634.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998140|ref|ZP_04718064.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240079903|ref|ZP_04724446.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240112111|ref|ZP_04726601.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240124885|ref|ZP_04737771.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|238690207|sp|B4RNT1|SYL_NEIG2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193932888|gb|ACF28712.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|317165582|gb|ADV09123.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 876

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   + ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|56750945|ref|YP_171646.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81299398|ref|YP_399606.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820674|sp|Q5N3J4|SYV_SYNP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56685904|dbj|BAD79126.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168279|gb|ABB56619.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 909

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 30/286 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     +T G+ +  +  +  F+P    V G DI+ F    W A +       
Sbjct: 466 VLDTWFSSGLWPFSTLGWPNQTEDLET-FYPTSTLVTGFDIIFF----WVARMTMMAGHF 520

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKD 338
           +  +P  K V+ HG +     +K+SKS GN IDP+ +I+  G DALRY L+RE +  G+D
Sbjct: 521 TGKMPF-KDVYIHGLVRDENNKKMSKSAGNGIDPLILIDRYGTDALRYALIREVVGAGQD 579

Query: 339 GFYD-----KDGLKKRVNADLANGIGNLVSRSVSMILKDYD----GMIPTPGAFTESDES 389
              D      +      + + AN + N  SR V + L D      GM  T      +D  
Sbjct: 580 IRLDYNRKTDESATVETSRNFANKVWN-ASRFVMLNLDDKTPEQLGMAAT-ADLELADRW 637

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS      + +   ++   +  A  Q+   +     D Y +  KP  L   +       
Sbjct: 638 ILSRYHATTEALINQIEAYDLGAAAKQLYEFIWGDFCDWYIELVKP-RLYGEDAQSRLVA 696

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQ 491
                +++  +  LL  F+P +  +I+  L    E++    QS  Q
Sbjct: 697 QQTLAQILEGILRLLHPFMPHVTEEIWHTLNQVGEDQFLALQSFPQ 742



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTD 52
          H+GHA+E  + DVL RF R+ G + L+  GTD
Sbjct: 56 HMGHAFEASLIDVLIRFQRMRGKNALWLPGTD 87


>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 928

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++  T      P+ S    +PADL++ G D  R  F++    +  +S   
Sbjct: 523 ILDVWFDSGSSH--TAVMAQRPELS----YPADLYLEGSDQYRGWFNSSLITSVAISGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +++ S GF+L  KG K+SKSLGNVI P +VI+++G + +R ++ 
Sbjct: 577 PY-RQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVA 622



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           + N   H+GHA   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  +MA+   + +D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------NMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +KG IYKG    ++S   E+   + EV
Sbjct: 169 EMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198


>gi|268319013|ref|YP_003292669.1| hypothetical protein FI9785_522 [Lactobacillus johnsonii FI9785]
 gi|262397388|emb|CAX66402.1| leuS [Lactobacillus johnsonii FI9785]
          Length = 804

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      E+D  +  V +  ++++ E+ +    + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQEKIVDENDGELDKVYAETVKKVTEDFEALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIIDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|262371100|ref|ZP_06064422.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313986|gb|EEY95031.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 873

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 12/175 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  + YI +   YP+ + H+GH     I DV++RFHRL G  VL   G D  G     AA
Sbjct: 35  EGPRRYILSMFPYPSGKLHMGHVRNYTIGDVISRFHRLKGETVLQPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 95  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYRWEQWLFVQLYKKGLIY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 RKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 202


>gi|228472882|ref|ZP_04057639.1| isoleucine-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275464|gb|EEK14241.1| isoleucine-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 1138

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 10/103 (9%)

Query: 252 KAKFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISK 305
           K K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK
Sbjct: 634 KGKAFPADFIAEGVDQTRGWFYTLHAIATSVFDSVAY----KNVMSNGLVLDKNGQKMSK 689

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            LGN +DP E +E+ G DA R++++       +  +D +G+++
Sbjct: 690 RLGNAVDPFETLEKYGADATRWYMISNANPWDNLKFDVEGIEE 732


>gi|227535647|ref|ZP_03965696.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227186777|gb|EEI66844.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 803

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 11/178 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y+      +S        ++EV  G    G +   +    QWM       +++AY +K
Sbjct: 149 YEAEVPVNWSPNLGTVVANEEVIDGKTERGGFPVVRKPMRQWM------LKITAYAEK 200



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 32/159 (20%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL      +P K     +F+ G IL  
Sbjct: 513 DYDKLKAWMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGA-IPNKEPFQRLFNQGMILGD 571

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG------------- 339
             EK+SKS GNV++P +V++E G D LR +      L   IA    G             
Sbjct: 572 NHEKMSKSKGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGLAGARKFLDRVWS 631

Query: 340 -FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            F D +G L+ R+       +  + + +V  + +DYD +
Sbjct: 632 AFIDDEGKLRDRITTINDGRLDKVYNETVKKVTEDYDAL 670


>gi|146276551|ref|YP_001166710.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145554792|gb|ABP69405.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 977

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 19/135 (14%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           V  GL D     + FD           ++ VW D+ + +       D PDG++     AD
Sbjct: 567 VLGGLHDPEAYEQIFD-----------VLDVWFDSGSTHAFV--LRDRPDGTEDGI--AD 611

Query: 260 LHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
           +++ G D  R  FH+    A       P  + V +HGF L  KG K+SKSLGN + P EV
Sbjct: 612 VYMEGTDQHRGWFHSSMLQACGTKGRAPY-RGVVTHGFTLDEKGMKMSKSLGNTVVPQEV 670

Query: 317 IEEVGVDALRYFLVR 331
           I++ G D LR ++ +
Sbjct: 671 IDQYGADILRLWVAQ 685



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPI 108


>gi|319953837|ref|YP_004165104.1| valyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422497|gb|ADV49606.1| Valyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 876

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 130/310 (41%), Gaps = 40/310 (12%)

Query: 179 YYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           YY    E  +  E ++E +  + VK+G   L +S    D   +   D  +  ++W  ++ 
Sbjct: 416 YYGEGAEDFVVAESKDEALEKAIVKTGNSTLKISDLKQD---EDALDTWFSSWLWPISVF 472

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-----NLPLPKKVF 291
           N     G L+  +     ++P +  V G DIL F    W A ++ +     + P  + V+
Sbjct: 473 N-----GILEPENKEIEYYYPTNDLVTGPDILFF----WVARMIISGYEYRDKPPFENVY 523

Query: 292 SHGFILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
             G +  K   K+SKSLGN  D + +IEE G D +R  L+   A G D  +D+   ++  
Sbjct: 524 LTGLVRDKQRRKMSKSLGNSPDALGLIEEYGADGVRVGLLLSAAAGNDLMFDESLCQQGK 583

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN I N         + D    +P P A     E   +  ++ L EI ++     I
Sbjct: 584 N--FANKIWNGFRLVQGWEVAD----LPQPEASKLGLEWYNAKFNQTLLEIEDHFSKYRI 637

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI------LLQA 464
             AL  +  LV      +D    W L+   P     +   T + +  LAI      LL  
Sbjct: 638 SDALMAIYKLV------WDDYSSWLLEIVKPAYQQPIDKTTFDAV--LAIFENNLKLLHP 689

Query: 465 FVPKLANKIF 474
           F+P L  +I+
Sbjct: 690 FMPFLTEEIW 699


>gi|295706932|ref|YP_003600007.1| leucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804591|gb|ADF41657.1| leucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 804

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 30  KRKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F + N  NFR     L  SYD    I TT+  ++   + ++ ++   G  Y
Sbjct: 90  LDTGNDPAEFTELNINNFRRQIKSLGFSYDWEREINTTDPNYYKWTQWIFLQLYKNGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV+    + +  +++AY D+LL  
Sbjct: 150 VDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            +    PE I  ++R
Sbjct: 205 LDELDWPESIKEMQR 219



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 38/186 (20%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+  T      D  K K W P D+++ G +    H +Y   W  FL
Sbjct: 491 PQWAGSCWY--YLRYIDPTNSEALADADKLKEWLPVDIYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 LSANLPLPK----KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF------ 328
               +   K    K+F+ G IL    EK+SKS GNV++P E++E  G D LR +      
Sbjct: 549 YDIGVVPTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDEIVESHGADTLRLYEMFMGP 608

Query: 329 LVREIACGKDGFYDKDGLKK---RVNADLANGIGNLVSR---------------SVSMIL 370
           L   IA    G    DG ++   RV   L +  G L S+               +V  + 
Sbjct: 609 LDASIAWSTKGL---DGARRFLDRVWRLLVDDNGELSSKVQESNDTTLERVYHQTVKKVT 665

Query: 371 KDYDGM 376
           +DY+G+
Sbjct: 666 EDYEGL 671


>gi|323527126|ref|YP_004229279.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384128|gb|ADX56219.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 945

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 14/228 (6%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A +L    P    + +HGF +  +G K+SKSLGN IDP
Sbjct: 575 PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY-NALLTHGFTVDGEGRKMSKSLGNGIDP 633

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV   +G + +R ++      G+    ++  + KRV          L     ++   DY
Sbjct: 634 HEVANRLGAEIIRLWIASTDYSGELAISEE--ILKRVTESYRRIRNTLRFLLANLSDFDY 691

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
           +        + E D   +++ + +  EI  +      H  +A++ +  SE     Y D  
Sbjct: 692 EKNARPVDDWLEIDRYAVALTANLQNEILAHYDKYEFHPVVAKLQTFCSEDLGGFYLDVL 751

Query: 432 KPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           K   L  T PD      A T LY   + + +L     +F  + A K+F
Sbjct: 752 KD-RLYTTAPDSVARRSAQTALYHIAQGLLRLMAPFLSFTAEEAWKVF 798



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 18/136 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R+K  +     Y N   H+GHA   I+ D++ +   + G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNMAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTC 106
                      A+  Q A       +++    FR +  + D  +D+  +T          
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGD--WDNPYKTMNFANEAGEI 171

Query: 107 RILWKKISDKGDIYKG 122
           R L  KI +KG +++G
Sbjct: 172 RAL-AKIMEKGYVFRG 186


>gi|126666689|ref|ZP_01737666.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628734|gb|EAZ99354.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 939

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 16/176 (9%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K+V +HGF +  KG K+SKSLGNVI P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLKTSIAINGVAPY-KQVLTHGFTVDGKGYKMSKSLGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV  ++G D LR ++      G +    KD L++  +AD    I N    +   ++ + 
Sbjct: 617 QEVTNDLGADILRLWVAATDYSG-EMTVSKDILRQ--SADGYRRIRN----TARFLMSNL 669

Query: 374 DGMIPTPGAFTESDESILS--VCSRVLQ---EIRENMQNQLIHRALAQVISLVSEV 424
            G  PT      +D   L   +  R LQ   EI E+ +N    R   +V +    +
Sbjct: 670 TGFDPTKHTVAPADMMALDRWMVDRALQLQNEIHEDYENYAFLRIYQKVYNFCESI 725



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R K  +     Y N   HIGHA   I+ D++ +     G D  +  G D HG        
Sbjct: 48  RNKFILHDGPPYANGSIHIGHAVNKILKDIIVKSRGFMGFDAPYVPGWDCHGLPIEHKVE 107

Query: 56  QKIAKAA 62
           QKI KA 
Sbjct: 108 QKIGKAG 114


>gi|197099534|ref|NP_001127239.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Pongo
           abelii]
 gi|75070896|sp|Q5RDP4|SYLM_PONAB RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|55726702|emb|CAH90113.1| hypothetical protein [Pongo abelii]
          Length = 903

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D
Sbjct: 638 EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD 679


>gi|254492918|ref|ZP_05106089.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268593990|ref|ZP_06128157.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268596044|ref|ZP_06130211.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268598169|ref|ZP_06132336.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268683466|ref|ZP_06150328.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|226511958|gb|EEH61303.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268547379|gb|EEZ42797.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268549832|gb|EEZ44851.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268582300|gb|EEZ46976.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268623750|gb|EEZ56150.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 878

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   + ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|225165517|ref|ZP_03727340.1| valyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224800235|gb|EEG18642.1| valyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 1008

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 70/315 (22%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLL 280
           ++  W  +      T G+ D  D S A      + +P      G DI+     +W A ++
Sbjct: 497 VLDTWASSWLWPFATQGWPDELDASSAAADFYARHYPTTTLATGADII----FFWVARMI 552

Query: 281 SANLPLP------------KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
            A L               K V+ +G +  K G K+SK+LGN  DP+++I + G D LR+
Sbjct: 553 MAGLEFTHPGAPVEQRIPFKHVYFNGIVRDKQGRKMSKTLGNSPDPLDLIAKYGADGLRF 612

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS----RSVSMILKDYDGMIPTPGAF 383
            L++    G+D  +D+D ++   N    N + N          +  ++     I  P A 
Sbjct: 613 GLLQIAPLGQDVKFDEDRIEAGKN--FCNKLWNACRFRQMNGTAANIQHPTSNIQHPTAN 670

Query: 384 TESDE----------------SILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +E                   S L V CSR+L  I     +   H  LA ++     ++R
Sbjct: 671 SEQSPPPPPSGAAAPHFDVGCSTLDVGCSRILARIDAQKLDDDDHAILAALLDTTRILER 730

Query: 427 YFD-------AQKPW------------ELKKT---NPDRA--STVLYVTVEVIRQLAILL 462
            F         Q+ +            E+ K    +PD A    VL +   VIRQ  +L 
Sbjct: 731 SFGEFEFATATQRLYSFFWNDFCDWYVEVSKARVQDPDPAVRDHVLAIQDFVIRQFLLLF 790

Query: 463 QAFVPKLANKIFDIL 477
             F P +  +++ +L
Sbjct: 791 HPFAPFITEELWHLL 805


>gi|72162335|ref|YP_289992.1| valyl-tRNA synthetase [Thermobifida fusca YX]
 gi|90108446|sp|Q47NK0|SYV_THEFY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71916067|gb|AAZ55969.1| valyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 881

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 12/195 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           +M  W  +        G+  +PD  +  F P DL   G+DI+R   F  +    F     
Sbjct: 532 VMDTWATSSLTPQIAGGWESDPDLFERVF-PMDLRPQGQDIIRTWLFSTVVRSHFEHDC- 589

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           LP  K   S   +    +K+SKS GNV+ P+ ++E+   DA+RY+       G D   D+
Sbjct: 590 LPWKKAAISGWILDPDRKKMSKSKGNVVTPLSMLEKYSSDAVRYWAASG-RLGTDTALDE 648

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIR 402
             +K  +   LA  I N    ++S+  +D    +  P A TE  D S+L+V + V+Q+  
Sbjct: 649 KQMK--IGRRLAIKILNASKFALSVAGED---TVADPAAVTEPLDRSMLAVLAEVVQDAT 703

Query: 403 ENMQNQLIHRALAQV 417
                    RAL + 
Sbjct: 704 AAFHEYDHTRALERT 718



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K RE+++ I T     +   HIGH +     D +ARF R++G  V +  G D++G    +
Sbjct: 63  KSREEIFAIDTPPPTVSGSLHIGHVFSYTHTDTVARFQRMNGKSVFYPMGWDDNGLPTER 122

Query: 61  AAQN 64
             QN
Sbjct: 123 RVQN 126


>gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 921

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 575 KAPY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV 621



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTK 70
             +N  V  K
Sbjct: 105 LTKNKKVNRK 114


>gi|240015766|ref|ZP_04722306.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 876

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   + ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938843|sp|Q45477|SYI_BACSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 921

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++       D+         PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDD------LVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 575 KAPY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV 621



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTK 70
             +N  V  K
Sbjct: 105 LTKNKKVNRK 114


>gi|170695377|ref|ZP_02886523.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139777|gb|EDT07959.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 863

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 16/187 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 91  MANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y D+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYADE 201

Query: 176 LLSYYES 182
           LL+  E 
Sbjct: 202 LLNDLEG 208


>gi|224531696|ref|ZP_03672328.1| leucyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511161|gb|EEF81567.1| leucyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 840

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 5/195 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKRQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YE--SHPEFILPIER 192
            E    PE +  ++R
Sbjct: 213 LEELEWPESVKEMQR 227


>gi|167035836|ref|YP_001671067.1| leucyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083147|sp|B0KJW8|SYL_PSEPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166862324|gb|ABZ00732.1| leucyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 868

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 152 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|302381491|ref|YP_003817314.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192119|gb|ADK99690.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 865

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GHA   ++ DV+AR  R  G DVL   G D  G     AA 
Sbjct: 34  RPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARHKRAQGYDVLHPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+  K +   N    R    +L +S D
Sbjct: 94  ERGIHPKGWTYDNIAQMRAQLKLLGLSLD 122



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 29/177 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P E+++  GVDA R F++ +    +D  +   G++             
Sbjct: 632 EKMSKSRKNVVAPQEILDSHGVDAGRLFVLSDSPPERDVQWTPGGVEG------------ 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             SR V  +   +DG   +       D ++L    + ++ + E ++    + A+A++ + 
Sbjct: 680 -ASRFVQRVWTLFDGFDGSAAGDPAQDAALLKETHKAIKAVSEGVEGFRFNSAIAKLYAF 738

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+ +  +              D AS       E +  LA L+  F P LA + +  L
Sbjct: 739 VATLRDH--------------DAASG--SARREALSALARLIAPFTPHLAEEGWSRL 779


>gi|261838834|gb|ACX98600.1| leucyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 806

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GVHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++ + L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALEGAHRFIKRL-YDKANAINP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|268316238|ref|YP_003289957.1| leucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333772|gb|ACY47569.1| leucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 906

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R+ G +VL   G D  G    + A
Sbjct: 37  KPKYYVLDMFPYPSGAGLHVGHPEGYTATDIMARYRRMKGYNVLHPMGWDAFGLPAEQYA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                  ++  ++N   FR     L  SY  D  I TT+ R++   + ++ ++   G  Y
Sbjct: 97  IETNTHPRITTERNITRFRSQLKSLGFSYDWDREINTTDPRYYKWTQWIFLQLYKMGLAY 156

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDK 175
           +      W         N++ +   ++   Y     P+ QWM       R++AY D+
Sbjct: 157 EAEVPVNWCPALGTVLANEEVIDGKSERGGYPVYRRPMRQWM------LRITAYADR 207



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 31/176 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P +VIE+ G D+LR + +      +   +   G++         G+   
Sbjct: 678 KMSKSRGNVVNPDDVIEQYGADSLRLYEMFMGPLEQVKPWSMRGVE---------GVHRF 728

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   + + D DG +    A  E     L V  R L+ + ++++    + A+A ++  V
Sbjct: 729 LNRVWRLYVNDADGSLRVTDA--EPTREQLRVLHRTLRRVTDDIEAMRFNTAIAAMMEFV 786

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +E +R+           T P RA         V     ++L  F P +A ++++ L
Sbjct: 787 NEANRW----------DTFP-RA---------VAEPFVLMLSPFAPHIAEELWERL 822


>gi|116327373|ref|YP_797093.1| leucyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332012|ref|YP_801730.1| leucyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280255|sp|Q04Q48|SYL_LEPBJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122284826|sp|Q054T5|SYL_LEPBL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116120117|gb|ABJ78160.1| Leucine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125701|gb|ABJ76972.1| Leucine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 864

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 30  KPKFYCLDMFPYPSGAGLHVGHPEGYTATDILSRFKRMKGFEVLHPMGWDAFGLPAERYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G+   +    N  NFR    ++ +SYD
Sbjct: 90  MQTGIHPAITTKNNIDNFRRQIQMIGLSYD 119



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 67/318 (21%)

Query: 184 PEFILPIERRNEVISFVKSGLKD--LSLSRKTFDWGIKIPDDPQY---------IMYVWI 232
           PE  LP+E    +  F  SG  +  L+L+++   +      DP+           M  W 
Sbjct: 500 PESELPLELPPNLEEFKPSGTGESPLALAKEWLQY-----KDPETGEIGTRETNTMPQWA 554

Query: 233 DALTNYLTTTGYLDNPDGS-------KAKFWPADLHVIGKDILRFHAIY---WPAFL--- 279
            +   YL    Y+D  +G        + K+ P DL+V G +    H +Y   W  FL   
Sbjct: 555 GSCWYYLR---YIDPKNGKLFCDPDLEKKWMPVDLYVGGAEHAVLHLLYSRFWHKFLYDI 611

Query: 280 --LSANLPLPKKVFSHGFILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             +S   P   K+   G IL + + K+SKSLGNVI+P +VI + G D+LR F        
Sbjct: 612 GVVSTQEPF-AKLIHQGLILGEDKRKMSKSLGNVINPDDVIRKYGADSLRLF-------- 662

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            + F     + K  +     G+   ++R V  +    +G          + E  L +  +
Sbjct: 663 -EMFMGPLEMVKPWSTRGVEGVFRFLNR-VWRLFHTGEGESFRLDEIEPTTEE-LKILHK 719

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +Q++ E++ N   + A++Q++  V+E               T  DR         EV+ 
Sbjct: 720 TIQKVGEDIPNFSFNTAISQLMIFVNEF--------------TPSDRRPK------EVLE 759

Query: 457 QLAILLQAFVPKLANKIF 474
              +LL  F P +A +++
Sbjct: 760 TFILLLAPFAPHIAEELW 777


>gi|78211836|ref|YP_380615.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78196295|gb|ABB34060.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 974

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       DN        +PADL++ G D  R  F +    +  ++ + P
Sbjct: 556 MDVWFDSGSSWAAVARQRDNLS------YPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 609

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             K+V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR ++
Sbjct: 610 Y-KRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRLWV 662



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   ++ DV+ ++  L+G  V +  G D HG  I
Sbjct: 70  YANGALHMGHALNKVLKDVINKYQVLNGRQVRYVPGWDCHGLPI 113


>gi|16124954|ref|NP_419518.1| isoleucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233674|ref|YP_002516110.1| isoleucyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81535936|sp|Q9AAA5|SYI_CAUCR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13421924|gb|AAK22686.1| isoleucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962846|gb|ACL94202.1| isoleucyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 969

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 18/142 (12%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDA-LTNYLTTTGYLDNPD 249
           +++ ++ G  D   +R   D+ +   D  QY     I+ VW D+  T+  T  G  D+  
Sbjct: 536 ILAAIREGGADAWFTRPDADF-LGAHDPAQYEKITDILDVWFDSGCTHAFTIEGRADSA- 593

Query: 250 GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKS 306
                 WPADL++ G D  R  F +            P  K V +HGF +   GEK+SKS
Sbjct: 594 ------WPADLYLEGSDQHRGWFQSSLLEGCGTRGRAPY-KAVVTHGFTMDENGEKMSKS 646

Query: 307 LGNVIDPIEVIEEVGVDALRYF 328
            GN I+P  + +E G + LR +
Sbjct: 647 RGNTIEPQTITKESGAEILRLW 668


>gi|126462982|ref|YP_001044096.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104646|gb|ABN77324.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 984

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 19/135 (14%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           V  GL D     + FD           ++ VW D+ + +       D PDG++     AD
Sbjct: 574 VLGGLHDPEAYEQIFD-----------VLDVWFDSGSTHAFV--LRDRPDGTEDGI--AD 618

Query: 260 LHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
           +++ G D  R  FH+    A       P  + V +HGF L  KG K+SKSLGN + P EV
Sbjct: 619 VYMEGTDQHRGWFHSSMLQACGTKGRAPY-RGVVTHGFTLDEKGMKMSKSLGNTVVPQEV 677

Query: 317 IEEVGVDALRYFLVR 331
           I++ G D LR ++ +
Sbjct: 678 IDQYGADILRLWVAQ 692



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPI 108


>gi|220926267|ref|YP_002501569.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219950874|gb|ACL61266.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 903

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +   A+++P    V G DI+ F         L A  
Sbjct: 472 VLDTWFSSGLWPFSTLGW---PEATPELARYYPTSTLVTGFDIIFFWVARMMMLSLHAMD 528

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +P + V+ H  +   KG K+SKS GNV+DP+++++  G DALR+ L    A G+D
Sbjct: 529 EVPFRTVYIHALVRDEKGAKMSKSKGNVVDPLDLVDRYGADALRFTLAAMAAQGRD 584



 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA    + DVLARF RL G DVL+  GTD           +AG+
Sbjct: 39  SIMIPPPNVTGSLHMGHALNNTLQDVLARFERLRGKDVLWQPGTD-----------HAGI 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T++ V++     ++  D   +   +F+R
Sbjct: 88  ATQMVVERRLAEHQE-PDRRTLGRPEFVR 115


>gi|114586471|ref|XP_001147597.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 830

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D       V  D   G+  
Sbjct: 638 EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-------VKTDALPGVLR 690

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--------SVCSRVLQEIRENMQNQ 408
               L + +   I     G  P P   +  +++          SV S+V     E+    
Sbjct: 691 WQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFS-- 748

Query: 409 LIHRALAQVISLVSEVDR 426
            ++ A++Q++ L + + +
Sbjct: 749 -LNSAISQLMGLSNALSQ 765


>gi|322709112|gb|EFZ00688.1| Isoleucyl-tRNA synthetase, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 1017

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 18/260 (6%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
            +N D      +PAD    G D  R  F+ +      L   LP  + V  +G +L + G+
Sbjct: 476 FENHDEFHGGHFPADFIAEGLDQTRGWFYTLTVLGNKLFGKLPF-RNVLVNGMVLAEDGK 534

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN- 360
           K+SKSL N  DP  + E  G DALR +L+       +    K+   K + + +   + N 
Sbjct: 535 KMSKSLKNFPDPSHIFERYGSDALRLYLINSPVVKAEPLRFKESGVKEIVSKVLLPLWNS 594

Query: 361 --LVSRSVSMILKDY------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               S   ++  K        D    T G     D  +L+ C  +LQ I + M+   ++ 
Sbjct: 595 YRFFSEQAALYKKTTGQDFVADITFSTGGLNNVMDRWVLAECQSLLQFIEQEMRGYRVYT 654

Query: 413 ALAQVISLVSEVDRY---FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + +++ ++ ++  +   F+ ++            +  L   ++V+  L   L  F+P +
Sbjct: 655 VVPRLLKMIDDLTNWYIRFNRKRLKGAAGLGEADTTAALNTLLQVLFTLVTALAPFIPFI 714

Query: 470 ANKIFDIL--FVADENRCFQ 487
              I+ +L  F+ D    F+
Sbjct: 715 TEHIYGLLRPFLGDVLASFR 734


>gi|221640006|ref|YP_002526268.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|221160787|gb|ACM01767.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 999

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 19/135 (14%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           V  GL D     + FD           ++ VW D+ + +       D PDG++     AD
Sbjct: 589 VLGGLHDPEAYEQIFD-----------VLDVWFDSGSTHAFV--LRDRPDGTEDGI--AD 633

Query: 260 LHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
           +++ G D  R  FH+    A       P  + V +HGF L  KG K+SKSLGN + P EV
Sbjct: 634 VYMEGTDQHRGWFHSSMLQACGTKGRAPY-RGVVTHGFTLDEKGMKMSKSLGNTVVPQEV 692

Query: 317 IEEVGVDALRYFLVR 331
           I++ G D LR ++ +
Sbjct: 693 IDQYGADILRLWVAQ 707



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPI 108


>gi|172041055|ref|YP_001800769.1| valyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852359|emb|CAQ05335.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 928

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 52/184 (28%)

Query: 204 LKDLSLSRKTFDWGIKIP---------------DDP---------QYIMYVWIDALTNYL 239
           + D ++SR+ + WG +IP               D+P         + ++  W  +     
Sbjct: 420 MHDWTISRQLW-WGHRIPIWYGPEGEVVCCGPDDEPPTGEGWHQDEDVLDTWFSSALWPF 478

Query: 240 TTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP------- 287
           +T G+ +N PD    KF+P  + V G DIL F       F   A+     PL        
Sbjct: 479 STMGWPENTPD--LQKFYPTSVLVTGYDILFFWVARMMMFATFADTLEGSPLHGKANGEN 536

Query: 288 ------------KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                       K VF HG +  + G K+SKSLGN IDP++ + + G DALR+ L R   
Sbjct: 537 QAARDGRPQVPFKDVFLHGLVRDEHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGAN 596

Query: 335 CGKD 338
            G D
Sbjct: 597 PGAD 600



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 14/93 (15%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K   S  +  PN   + H+GHA +  + D ++R  R+ G +VL+  G+D          
Sbjct: 52  DKPPFSIVLPPPNVTGRLHMGHALDHTLIDAMSRRRRMQGYEVLWLPGSD---------- 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
            +AG+ T+  V+ + +  R+  D  D   ++FI
Sbjct: 102 -HAGIATQTRVESDLKK-RESKDRFDYGREEFI 132


>gi|170719813|ref|YP_001747501.1| leucyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229560000|sp|B1J150|SYL_PSEPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169757816|gb|ACA71132.1| leucyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 868

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 152 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|146296917|ref|YP_001180688.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166200200|sp|A4XKR2|SYI_CALS8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145410493|gb|ABP67497.1| Isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 920

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 584 PY-RIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  RNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRN---FRDMADVLDISYDDFIRTTEKR 101
                V  K+ V+++  +   FR       +SY D  R   KR
Sbjct: 105 -----VIKKLGVNRHEVDPVEFRKKCKEFALSYIDIQRQQFKR 142


>gi|312793533|ref|YP_004026456.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180673|gb|ADQ40843.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 920

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++ +      WP D+++ G D  R  F +    A       
Sbjct: 530 IMDVWFDSGSSHAYVLESREDLE------WPCDMYLEGNDQYRGWFQSSLLTAVATKGRA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF++  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 584 PY-RIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                   +  VD     FR       ++Y D  R   KR
Sbjct: 105 VIKKFGVNRHEVD--PVEFRKKCKEFALNYIDIQREQFKR 142


>gi|312879847|ref|ZP_07739647.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783138|gb|EFQ23536.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 829

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 45/245 (18%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-KKVFSHGFILHKGEK 302
           A +W P D ++ G +    H IY   F        LL   +  P   + + G +L +G K
Sbjct: 525 AAYWMPVDQYIGGIEHACLHLIYARFFTKVCSDLGLLPQTVREPFTNLLTQGMVLKEGTK 584

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP E+I   G D  R F++      KD  +   G++         G    +
Sbjct: 585 MSKSKGNVVDPDEIIRRYGADTARLFILFASPPEKDLDWSDKGVE---------GAHRFL 635

Query: 363 SRSVSMILKDYDGMIPTPGAFTESD----------ESILSVCSRVLQEIRENMQNQLIHR 412
            R   ++    +G+         SD            I     RV ++IR+  Q    + 
Sbjct: 636 GRVHRLVEDRLEGLRAAGAPLASSDLPRREDRDLKRLIHGTIDRVTRDIRDERQ---FNT 692

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A+++ L + +  +  A               T   V  E +  L + L  F P L  +
Sbjct: 693 AVARLMELSNALGAFKPAD-------------GTAWRVLREGVETLLVCLSPFTPHLCEE 739

Query: 473 IFDIL 477
           ++ +L
Sbjct: 740 LWQML 744



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 71/182 (39%), Gaps = 7/182 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y      YP+   H+GH     I D+LARF R+ G +VL+  G D  G     AA   
Sbjct: 32  KFYCLEMFPYPSGALHMGHLRNYSIGDLLARFLRMQGYNVLYPIGFDAFGLPAENAALKY 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-KG 122
           GV    +  +N  +  +    +  SYD    + T    ++   + L+ +   KG  Y K 
Sbjct: 92  GVQPSEWTWKNIDHMTEQLHRMGCSYDWRRRVETCNPDYYRWTQWLFLQFFKKGLAYRKH 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               W         N+  +    DG +       V+    E +F R + Y  +LL   + 
Sbjct: 152 APVNWCDSCQTVLANEQVI----DGGHCWRCGTAVKKRGLEQWFLRTTDYAQELLDCLDE 207

Query: 183 HP 184
            P
Sbjct: 208 LP 209


>gi|308273079|emb|CBX29683.1| Valyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 896

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+ +  D  K+ F+P  + V G DIL F    W A ++      
Sbjct: 458 VLDTWFSSALWPFSTMGWPEETDLLKS-FYPTSVLVTGFDILFF----WVARMMMMGIHF 512

Query: 282 -ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             ++P  K V+ H  +  + G+K+SKS GNVIDP+ +I++ G D+ R  L    A G+D 
Sbjct: 513 MGDVPF-KDVYVHALVRDEDGKKMSKSKGNVIDPLNIIDKYGTDSFRMTLAVFAAQGRDI 571

Query: 340 FYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
                  +KRV       N   N    ++  + +++  +     + +  D+ IL+    V
Sbjct: 572 KMS----EKRVEGYRHFINKFWNAARFALMHLTENHSDL--KFDSISLPDKWILARLKNV 625

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
              + + +     + A + +   V     D Y +A KP        ++   VL V   V 
Sbjct: 626 SGIVADAIDGYRFNDAASALYKFVWHELCDWYLEAIKPCLYGNMGEEKKDAVLGVLQRVF 685

Query: 456 RQLAILLQAFVPKLANKIF 474
             + ILL    P +  +I+
Sbjct: 686 HDVLILLHPITPFVTEEIW 704



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     H+GHA  + + D+L R+ RL G +VL+  GTD  G     A QN  V
Sbjct: 49  SIVIPPPNVTGVLHMGHALNITMQDILCRYRRLRGDNVLWMPGTDHAGI----ATQN--V 102

Query: 68  TTKVFVDQNS 77
             K    +N+
Sbjct: 103 VEKKLASENT 112


>gi|302754402|ref|XP_002960625.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
 gi|300171564|gb|EFJ38164.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
          Length = 1707

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 22/115 (19%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ T++ +  G          K WPAD+++ G D  R  F +    +       P
Sbjct: 720 MDVWFDSGTSWASVLG---------TKRWPADVYLEGSDQHRGWFQSSLLTSVATKGVAP 770

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             ++V +HGF+L  K  K+SKSLGNV+DP  VIE           G D LR ++ 
Sbjct: 771 Y-RQVLTHGFVLDEKNVKMSKSLGNVVDPRSVIEGGKNQKEQPAYGADVLRLWVA 824



 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   I+ D + R+  L G  + +  G D HG  I
Sbjct: 203 YANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWDCHGLPI 246


>gi|300722323|ref|YP_003711608.1| leucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628825|emb|CBJ89403.1| leucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 860

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYSNIDYMKNQLKMLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++AY ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDSQ-VERKEIPQWFIKITAYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEDWPEQVKIMQR 221


>gi|187925353|ref|YP_001896995.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187716547|gb|ACD17771.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 944

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 16/187 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 112 DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 171

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 172 MANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 229

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y D+
Sbjct: 230 AYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYADE 282

Query: 176 LLSYYES 182
           LL+  E 
Sbjct: 283 LLNDLEG 289


>gi|77464139|ref|YP_353643.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|77388557|gb|ABA79742.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 984

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 19/135 (14%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           V  GL D     + FD           ++ VW D+ + +       D PDG++     AD
Sbjct: 574 VLGGLHDPEAYEQIFD-----------VLDVWFDSGSTHAFV--LRDRPDGTEDGI--AD 618

Query: 260 LHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
           +++ G D  R  FH+    A       P  + V +HGF L  KG K+SKSLGN + P EV
Sbjct: 619 VYMEGTDQHRGWFHSSMLQACGTKGRAPY-RGVVTHGFTLDEKGMKMSKSLGNTVVPQEV 677

Query: 317 IEEVGVDALRYFLVR 331
           I++ G D LR ++ +
Sbjct: 678 IDQYGADILRLWVAQ 692



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPI 108


>gi|323127710|gb|ADX25007.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 933

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       DN        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARDNLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFHAPYVPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 933

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G +    PA
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLRR---PA 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGRKMSKSLGNTVSPAD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I  +
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 61  AAQNAGVT 68
             +  GV+
Sbjct: 108 VVKEVGVS 115


>gi|21910702|ref|NP_664970.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895608|ref|NP_801958.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759061|sp|Q8K6S2|SYI_STRP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21904905|gb|AAM79773.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28810857|dbj|BAC63791.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 933

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       DN        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARDNLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G  V +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFHVPYVPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|256027633|ref|ZP_05441467.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 933

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G +    PA
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLRR---PA 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGRKMSKSLGNTVSPAD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  +KA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVSKAREMSALEIRKLCEKYARKW------VGIQKEQFIRLGVLGDWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I + G I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203


>gi|85715502|ref|ZP_01046483.1| valyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85697697|gb|EAQ35573.1| valyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 938

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 121/268 (45%), Gaps = 37/268 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +     +T G+ D  P+ ++  ++P ++ V G DI+     +W A ++   + 
Sbjct: 481 VLDTWFSSALWPFSTLGWPDKTPELNR--YYPTNVLVTGFDII----FFWVARMMMMGIH 534

Query: 286 LPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             ++     V+ H  +   KG K+SKS GNVIDP+ ++++ G DALR+ L      G+D 
Sbjct: 535 FMQQAPFSTVYIHALVRDEKGAKMSKSKGNVIDPLHLVDKYGADALRFTLAAMAVQGRD- 593

Query: 340 FYDKDGLKKRVNADLANGIGNLVSR--SVSMILKDYDGMIPTPGAFTESDES----ILSV 393
                    +++     G  N  ++  +     +  + ++P     T + E+    I+  
Sbjct: 594 --------IKLSPQRVEGYRNFATKLWNACRFAEMNECVLPPDFDATAAKETLNRWIVHE 645

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRAST---VL 448
            +R   E+ E +++   + A   +   V  V  D Y +  KP    +  P ++ T   V 
Sbjct: 646 TARATCEVTEAIESSRFNDAAGALYRFVWNVYCDWYLELAKPVISGEDGPAKSETRAMVA 705

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +   E+++    LL  F+P +  +++ +
Sbjct: 706 WARDEILK----LLHPFMPFITEELWAV 729



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 13/77 (16%)

Query: 2  KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          + RE    +  I  PN     H+GHA    + DVL RF R+ G DVL+  GTD       
Sbjct: 17 ERREAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTD------- 69

Query: 60 KAAQNAGVTTKVFVDQN 76
              +AG+ T++ V++ 
Sbjct: 70 ----HAGIATQMVVERQ 82


>gi|291320148|ref|YP_003515409.1| Isoleucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752480|emb|CBH40452.1| Isoleucyl tRNA synthetase (Isoleucine tRNAligase) [Mycoplasma
           agalactiae]
          Length = 892

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T  L     +D     K K  P DL++ G D  R  F++    +   +   
Sbjct: 523 IMDVWFDSGTTSLAVE--ID----EKLKP-PYDLYLEGSDQYRGWFNSSLINSVAYTHKS 575

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K++ SHGF+L  KGEK+SKS GNV+DP++VI++ G D LR ++
Sbjct: 576 PY-KQIVSHGFVLDSKGEKMSKSKGNVVDPLKVIKKYGADILRLWV 620



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKIAKAAQNAGVTT 69
           Y N   HIGHA   I+ D++ R+  + G    +  G D HG     + +  A  N  V +
Sbjct: 61  YANGSIHIGHALNKILKDIIVRYKSMRGFYSPYVPGWDTHGLPIELKMLTDAKINYKVIS 120

Query: 70  KVFVDQNSRNFRDMADVLDIS----------YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            + + + +  + D+     IS          +    +T E +       L+KK+   G +
Sbjct: 121 PIELRKRASEYADIQIENQISQFKSLQLLTDFKKIYKTKEPKFEAVQLKLFKKMVLDGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG    ++S   +    + EV
Sbjct: 181 YKGLKPVYWSPSSQTALAEAEV 202


>gi|255931483|ref|XP_002557298.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581917|emb|CAP80055.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 969

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 21/202 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI +   YP+   H+GH     I+DV++RF+++ G DVL   G D  G     AA
Sbjct: 72  QKPKSYILSMFPYPSGTLHMGHLRVYTISDVISRFYKMRGHDVLHPMGWDAFGLPAENAA 131

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+    +  +N    ++    +   +D        R   TC   + + + +  I+  
Sbjct: 132 IERGIDPAAWTQENILKMKEQLGCISAEFD------WDRELATCSPDFYEHTQR--IFLM 183

Query: 123 CYSGWYSLRDEAYYNDDEVYKG--------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            Y    + + EA  N D V K         A+G  + +    V+ +  + +FF+++ +++
Sbjct: 184 LYQKNLAYQAEALVNYDPVDKTVLANEQVDANGFSWRSGAK-VEKLNLKQWFFKITDFKE 242

Query: 175 KLLSYYES----HPEFILPIER 192
            LL   +S     PE +L ++R
Sbjct: 243 ALLKDLDSLAGGWPERVLSMQR 264


>gi|300741662|ref|ZP_07071683.1| valine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380847|gb|EFJ77409.1| valine--tRNA ligase [Rothia dentocariosa M567]
          Length = 910

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++  W  +       TG+  +P+   AK +P DL   G DI+R    +    A  L++++
Sbjct: 524 VLDTWATSSLTPQIATGWATDPE-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETLASSV 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P +V+++ G DA+RY+       G D  YD+ 
Sbjct: 583 PWYNTALSGWILDPDRKKMSKSKGNVVVPHDVLDKYGSDAVRYWAA-SARLGADTAYDEG 641

Query: 345 GLK--KRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +K  +R+   L N    + NL +   S+I     G + T       D S+L   + +++
Sbjct: 642 QMKIGRRLAIKLLNASKFVLNLGATEKSVITSQAQGRVLT----NALDRSLLVRLAYLVE 697

Query: 400 EIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           E     +     RAL    S   S  D + +  K            ++VL      +  L
Sbjct: 698 EATAAFEKYEYARALQIAESFFWSFTDDFVELIKDRAYGTRGETEQASVLAALATTLDAL 757

Query: 459 AILLQAFVPKLANKIF 474
             L   F+P +  +I+
Sbjct: 758 LRLFAPFLPFVTEEIW 773



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REQVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMSGKNVFYPLGWDDNGLPTERRV 106

Query: 63  QN 64
           QN
Sbjct: 107 QN 108


>gi|269958742|ref|YP_003328529.1| isoleucyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848571|gb|ACZ49215.1| isoleucyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 1107

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 32/242 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLGNVI 311
           PAD   I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L N  
Sbjct: 582 PADF--ITEYIAQTRGWFYTLFVLSTGLFDRHPF-KNCICHGVVLDVKGQKLSKRLNNYP 638

Query: 312 DPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-LKKRVNADLANGIGNLVSRSVSMI 369
           DP+E+ E+ G D++R+  L   ++ G D   D+DG + +     +   I N  S S   +
Sbjct: 639 DPMEMFEKYGADSVRFTMLSHAVSTGGDLLLDQDGDIIRDTLKSVVKPIWN--SYSFFTV 696

Query: 370 LKDYD---GMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQL--------IHRALAQ 416
             + D   G I     G     D+ IL  C+R++ E+ E M++          +  A A 
Sbjct: 697 YANSDQIKGRILESLEGVTNIMDQYILYECARMVAEVLEAMESNSAAVKDPYNVRLACAA 756

Query: 417 VISLVSEVDRYF---DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           ++    +++ ++      + W   KT+    A   LY    V+  L   +  F+P +A  
Sbjct: 757 IVQFSDKLNNWYIRGCRGRFWTQDKTDDKFNAYNTLYT---VLYHLVRAIAPFLPFVAES 813

Query: 473 IF 474
           I+
Sbjct: 814 IW 815


>gi|251782905|ref|YP_002997208.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391535|dbj|BAH81994.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 933

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       DN        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARDNLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFHAPYVPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|221126343|ref|XP_002166348.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 904

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + + YP+ + H+GH     I D+LAR+ R++G +VL   G D  G     A
Sbjct: 41  KPKKKFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRMNGHNVLMPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    +     + ++ D    + T +  ++   + L+ K+ +KG  
Sbjct: 101 ALKNKVPPAKWTYENIAYMKGQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLEKGIA 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL +
Sbjct: 161 YRKTQVVNWDPVDQTVLANEQVI---DGKGWRTG-AVVEKREIPGYYLKITDYAQELLDH 216

Query: 180 YE 181
            +
Sbjct: 217 VQ 218


>gi|26991474|ref|NP_746899.1| leucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|32130172|sp|Q88DN1|SYL_PSEPK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24986552|gb|AAN70363.1|AE016678_4 leucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313500773|gb|ADR62139.1| LeuS [Pseudomonas putida BIRD-1]
          Length = 868

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 152 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|288928354|ref|ZP_06422201.1| valine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331188|gb|EFC69772.1| valine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 893

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 29/257 (11%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN----- 283
            W  +    ++    ++ PD  +  ++ P    V G DI+ F    W A ++ A      
Sbjct: 459 TWFSSWLWPISVFNGINQPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRG 514

Query: 284 -LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +P  K V+  G +  K G K+SKSLGN  DPIE+IE+ G D +R  ++     G D  +
Sbjct: 515 KMPF-KNVYFTGIVRDKLGRKMSKSLGNSPDPIELIEQYGADGVRMGMMLSAPAGNDILF 573

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+   ++  N    N I N         + D     P P A   + +   +   +  +E+
Sbjct: 574 DETLCEQGRN--FNNKIWNAFRLVKGWEVSDQ----PQPEASRIACQWFEAKLRQTNEEL 627

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQ 457
            +      I  AL  V  L      ++D    W L+   P   S +       T+     
Sbjct: 628 NDLFSKYRISEALMAVYRL------FWDEFSSWYLEMIKPAYGSPIDSHTYNATLRYFET 681

Query: 458 LAILLQAFVPKLANKIF 474
           L  +L  F+P +  +++
Sbjct: 682 LLNMLHPFMPFITEELW 698


>gi|260222016|emb|CBA31159.1| Leucyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 922

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + + YP+ + H+GH     I D+LAR+ R++G +VL   G D  G     A
Sbjct: 41  KPKKKFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRMNGHNVLMPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    +     + ++ D    + T +  ++   + L+ K+ +KG  
Sbjct: 101 ALKNKVPPAKWTYENIAYMKGQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLEKGIA 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL +
Sbjct: 161 YRKTQVVNWDPVDQTVLANEQVI---DGKGWRTG-AVVEKREIPGYYLKITDYAQELLDH 216

Query: 180 YE 181
            +
Sbjct: 217 VQ 218


>gi|294654480|ref|XP_456540.2| DEHA2A05038p [Debaryomyces hansenii CBS767]
 gi|199428917|emb|CAG84495.2| DEHA2A05038p [Debaryomyces hansenii]
          Length = 944

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH     I+DV+ARF RL G +V+   G D  G     AA  
Sbjct: 75  EPFYCLSMFPYPSGMLHMGHLRVYTISDVIARFKRLKGYNVIHPMGWDAFGLPAENAAVE 134

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+   ++ D N +  ++   ++   +D        R   TC   + K + K  I+   +
Sbjct: 135 RGINPAIWTDSNIQKMKEQMSLMLADFD------WDREISTCSPDYYKWTQK--IFLLLF 186

Query: 125 SGWYSLRDEAYYNDDEV 141
               + R+EA  N D V
Sbjct: 187 EHGLAYRNEAEINWDPV 203


>gi|85713011|ref|ZP_01044049.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693180|gb|EAQ31140.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 859

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 2/144 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+ + H+GH     + DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  EKEKFYCLSMFPYPSGKLHMGHVRNYTLGDVVSRYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  QN    R+    L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 91  IQNKTAPAKWTYQNIEYMREQLKRLGFGYDWQREVATCSPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG 144
           K   +  +   D+    +++V  G
Sbjct: 151 KKNATVNWDPVDQTVLANEQVIDG 174


>gi|289191089|gb|ADC93657.1| aminoacyl tRNA synthetase AK-1 [synthetic construct]
          Length = 860

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|167043876|gb|ABZ08565.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG3E18]
          Length = 951

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 102/228 (44%), Gaps = 27/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS--ANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           F+P D    G+D++  H  +   F+L+  A  P    P+++  +G +L  G+K+SKS+GN
Sbjct: 570 FYPVDSRHSGRDLVPNHLTF---FVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGN 626

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +I   E + + G D +R  ++      +D  ++ + +K         GI N ++      
Sbjct: 627 IIPLREAVRKYGADPIRLTILNSAELLQDADFNVEAIK---------GIKNKLASMYEDC 677

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K      P        D+ I  +   ++    ++M    +  AL  ++         FD
Sbjct: 678 TKTKAEKFP---ELEPEDKWIHGILQNLVLNAGKSMDEIRLREALHHILF-------DFD 727

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++  W LK+T   + + +  +  +++    ++L  F P +A ++++ L
Sbjct: 728 SELQWYLKRTKSKQRTNISGILHKILSYRVLMLSPFAPHIAEEMWEKL 775



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK +I+ A  YPN+  HIGH     I DV +R+ R+ G +VLF  G    G  I   ++
Sbjct: 29  KEKKFITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGFNVLFPMGFHYTGTPILGMSK 88

Query: 64  --NAGVTTKVFVDQNSRNFRDMA 84
              AG T  +   +N  N  D A
Sbjct: 89  RVEAGDTEIIDGLKNIYNVPDEA 111


>gi|253569100|ref|ZP_04846510.1| leucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251841119|gb|EES69200.1| leucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 944

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 11/119 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    Q
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGFNVLNPMGYDAYGLPAEQ 87

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              +  Q+  +TTK  +D+    +R+  D +  S+D    IRT E  ++   +  ++K+
Sbjct: 88  YAIQTGQHPAITTKANIDR----YREQLDKIGFSFDWSREIRTCEPEYYHWTQWAFQKM 142


>gi|189083237|sp|A5W9H9|SYL_PSEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 868

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  KNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 152 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|314964633|gb|EFT08733.1| isoleucine--tRNA ligase [Propionibacterium acnes HL082PA1]
          Length = 1114

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 54/292 (18%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V    
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVGS-- 737

Query: 371 KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V E+  +
Sbjct: 738 RGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNW 795

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 796 YVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 843


>gi|312864585|ref|ZP_07724816.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
 gi|311099712|gb|EFQ57925.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
          Length = 935

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +G     +PADL++ G D  R  F++    +  ++ + 
Sbjct: 528 IMDVWFDSGSSW---NGVMNQREGLG---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 581

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKS GN+I P +V ++ G + LR ++ 
Sbjct: 582 PY-KAVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWVA 627



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 62  YANGNIHVGHALNKISKDIIIRSKSMMGYRAPYNPGWDTHGLPIEQVLAKKGVKRKEIPR 121

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+    ++DKG 
Sbjct: 122 ADYLEMCKEYALSQVDKQREDFKRLGVSADWE-NPYVTLTHDYEAAQIRVF-GAMADKGY 179

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 180 IYRGAKPVYWSWSSESALAEAEI 202


>gi|189500815|ref|YP_001960285.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496256|gb|ACE04804.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 1080

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 39/297 (13%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDALTNYLTTTGY-LDNPDGSKAKFW 256
           GL +L L +   D    I D  +Y     ++ VW D+ +       Y  +N +     F 
Sbjct: 516 GLVELDLHKPFVDRVYFIRDGRRYCRTPELIDVWFDSGSMPFAQLHYPFENREVFDTTF- 574

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD    G D  R  F+ ++    L+  + P  K +  +G IL  KG+K+SKS GNV+DP
Sbjct: 575 PADFIAEGVDQTRGWFYTLHAIGALI-FDKPAYKNLVVNGHILDRKGQKMSKSKGNVVDP 633

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E +E+ G D+LR++L+      +   ++ D +++         I    S +  ++  + 
Sbjct: 634 FETMEKYGADSLRWYLILSSPPWRPKSFNSDEIEEEQRKFFRAFIN---SYNFFVMYSNV 690

Query: 374 DGMI----PTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           DG      P P +     D  I+S  + ++  + + M+       L   I L++  D   
Sbjct: 691 DGFTFSEEPIPVSERSGLDRWIISSLNSLVSGVEQRME----QYDLTGAIRLIN--DFTV 744

Query: 429 DAQKPWELKKT---------NPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D    W ++++          PD+ +    LY  +E +   A LL  F P +A++IF
Sbjct: 745 DDLSNWYIRRSRKLFWKGEAGPDKTAAYQSLYQCLETV---AKLLAPFTPFIADRIF 798



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 23/128 (17%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFVDQ 75
           N +P + H +   I D++ RF  + G  V    G D HG  +  A +   G+  K  V++
Sbjct: 53  NGKPGVHHVFSRTIKDIVCRFKTMQGYKVPRKAGWDTHGLPVEIAVEKKLGLKNKAQVEE 112

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS-------DKGDIYKGCY---- 124
              +           ++D  R     H D  R  W +++       D  D Y  C     
Sbjct: 113 YGAD----------EFNDVARELVYHHIDDNREGWGRLTEMMGYWVDMDDPYITCTNEYM 162

Query: 125 -SGWYSLR 131
            S W++L+
Sbjct: 163 ESVWWALK 170


>gi|313681840|ref|YP_004059578.1| valyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154700|gb|ADR33378.1| valyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 872

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKISK 305
           A+F+P  L + G DIL F    W A ++      +  LP    ++ H  +  + G+K+SK
Sbjct: 483 ARFYPNTLLITGFDILFF----WVARMMMMGESFTGELPF-NHIYLHALVRDEHGQKMSK 537

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           S GNVIDP++++E+   DALR+ L      G+D     D L++  N
Sbjct: 538 SKGNVIDPLDMVEKYSADALRFTLAVLAVQGRDIRLSNDRLEQSRN 583


>gi|294668710|ref|ZP_06733803.1| leucine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309227|gb|EFE50470.1| leucine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 876

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFIKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y +N +GSK    PAD+ +   D  R  +    A L +  LP+         ++ 
Sbjct: 584 VCETYYRENANGSKDWINPADVELTFDDKGRPVS----AVLKADGLPV---------VIS 630

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             EK+SKS  N +DP E+I   G D  R F++
Sbjct: 631 GTEKMSKSKNNGVDPQELINAYGADTARLFMM 662


>gi|195953587|ref|YP_002121877.1| valyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933199|gb|ACG57899.1| valyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 990

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 47/263 (17%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGN 309
           +P  L V   DIL F    W A ++  +  L  K     V+ H  I   KG+K+SK+ GN
Sbjct: 570 YPNSLLVTAFDILFF----WVARMIMMSKMLNDKEPFKDVYIHALIRDEKGQKMSKTKGN 625

Query: 310 VIDPIEVIEEVGVDALRYFL------VREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           VIDPI+VIE+ G D+LR+ L      VR+I   +  F          +   AN I N   
Sbjct: 626 VIDPIDVIEKYGADSLRFTLASLSSAVRDIKLSEQKF--------EASKFFANKIWNAAK 677

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVS 422
             +S   +++   I     + + D  I++  +  + ++ E +++ Q  H A +      +
Sbjct: 678 FVISNTPENFLQDIIYGDMYEKEDYWIITALNLTIGQVTEYLEHYQFSHAAQSIYNFFWN 737

Query: 423 E-VDRYFD------AQKPWELKKTNPDRAS---------------TVLYVTVEVIRQLAI 460
           E  D Y +       +KP E+K+   D                  T L V   V+ +   
Sbjct: 738 EFCDWYIEFSKIRIYEKPIEIKEDMTDEKKSQIEQINNQIQKKKLTALAVLNTVLSKALR 797

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
           LL  F+P + + I D     D++
Sbjct: 798 LLHPFMPFITSYIHDKTIFNDKD 820



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 15/89 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D++ARF R+ G DV++  G D           +AG+
Sbjct: 33  SMVIPPPNVTGSLHIGHALNITIQDIMARFKRMQGYDVVWVPGFD-----------HAGI 81

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            T+  V++     ++    L+I  ++F++
Sbjct: 82  ATQFVVERELS--KENKSRLEIGREEFLK 108


>gi|169333665|ref|ZP_02860858.1| hypothetical protein ANASTE_00049 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259659|gb|EDS73625.1| hypothetical protein ANASTE_00049 [Anaerofustis stercorihominis DSM
           17244]
          Length = 801

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ Q  H+GH       D+++R  R++G +VLF  G D  G     
Sbjct: 29  EDKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVSRKKRMEGYNVLFPMGFDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV   +    N  NF+     L  S+D    + TT+ +++   + ++ ++  KG 
Sbjct: 89  YAIKTGVHPAIVTKNNIDNFKRQLKSLGYSFDWQREVDTTDPKYYKWTQWIFLQLFKKGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            YK       C S    L +E   N   V +   G+      N  QWM       +++ Y
Sbjct: 149 AYKKEFPINFCTSCKVGLANEEVVNG--VCERCGGEVVRKVKN--QWM------LKITEY 198

Query: 173 QDKLL 177
            D+L+
Sbjct: 199 ADRLI 203



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 24/161 (14%)

Query: 270 FHAIYWPAFL-----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVD 323
            ++ +W  FL     ++   P  K+  SHG IL +  EK+SKS GNV++P EVI+E G D
Sbjct: 542 LYSRFWHKFLYDIGVVNTKEPYQKRT-SHGMILGENHEKMSKSKGNVVNPDEVIDEFGAD 600

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR + +      K   + ++G+K         G    + R   M     DG+       
Sbjct: 601 TLRTYEMFIGDFEKVAPWSENGVK---------GCKRFLDRVSKMEDMIVDGV------- 644

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            E  + + ++  + ++++ E+ +    + A+AQ++ L ++V
Sbjct: 645 -EYSKELTTLMHQTIKKVSEDFETLKFNTAIAQLMKLTNQV 684


>gi|29348535|ref|NP_812038.1| leucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|48428545|sp|Q8A329|SYL_BACTN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29340440|gb|AAO78232.1| leucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 944

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 11/119 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    Q
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGFNVLNPMGYDAYGLPAEQ 87

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              +  Q+  +TTK  +D+    +R+  D +  S+D    IRT E  ++   +  ++K+
Sbjct: 88  YAIQTGQHPAITTKANIDR----YREQLDKIGFSFDWSREIRTCEPEYYHWTQWAFQKM 142


>gi|84683484|ref|ZP_01011387.1| isoleucyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668227|gb|EAQ14694.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 996

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 50/212 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSG---------LK 205
           V+W  + G        +++L S  ES P+++L  +R   V    F K G         L+
Sbjct: 506 VKWTPQTG--------RNRLYSMIESRPDWVLSRQRAWGVPLTCFTKKGALPTDPDFLLR 557

Query: 206 DLSLSRKT------------FDWGIK--------IPDDPQYI---MYVWIDALTNYLTTT 242
           D +++ +             ++ G K         PDD + +   + VW D+ + +    
Sbjct: 558 DETVNARVVAEFEAKGADVWYEDGFKDRVLGNVVNPDDYEQVFDVLDVWFDSGSTHAFV- 616

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
              D PDG++     ADL++ G D  R  FH+    A       P  + V +HGF L  K
Sbjct: 617 -LRDRPDGTEDGI--ADLYLEGTDQHRGWFHSSLLQACGTKGRAPY-RGVLTHGFTLDEK 672

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           G K+SKSLGN I P +V ++ G D LR ++ +
Sbjct: 673 GMKMSKSLGNTIAPEDVTKQYGADILRLWVAQ 704



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG        ++  K  +N  
Sbjct: 62  YANGHLHIGHALNKILKDMIVRSQQMLGHDARYVPGWDCHGLPIEWKIEEQYRKKGKNKD 121

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               +   Q  R F +    +DI  ++F R
Sbjct: 122 EVPVIDFRQECRRFAE--GWIDIQREEFKR 149


>gi|228999529|ref|ZP_04159107.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760240|gb|EEM09208.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 802

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNSPAEFTEKNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGLA 148

Query: 120 Y 120
           Y
Sbjct: 149 Y 149



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|317182768|dbj|BAJ60552.1| leucyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 806

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GVHPKTWTYKNIETMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|269218617|ref|ZP_06162471.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211728|gb|EEZ78068.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 998

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EK+YI    +YP+ +  H+GH    I  D +AR+ R+ G +VL+T G D  G    + A 
Sbjct: 75  EKVYILDMFSYPSGKGLHVGHPLGYIATDTIARYQRMLGKNVLYTMGFDAFGLPAEQYAV 134

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
             G   +V  +QN  N R     +  S+D          D++R T+
Sbjct: 135 QTGQHPRVTTEQNIANMRRQLKRIGFSHDSRRTFATTDVDYVRWTQ 180


>gi|224476848|ref|YP_002634454.1| leucyl-tRNA synthetase (fragment 1) [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421455|emb|CAL28269.1| truncated leucyl-tRNA synthetase (fragment 1) [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 341

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N G   + F +QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LNTGNNPREFTNQNIQTFKRQIQELGFSYDWDREVNTTDPDYYKWTQWIFIQLYNKGLAY 149


>gi|123966204|ref|YP_001011285.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|189083138|sp|A2BWL7|SYL_PROM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123200570|gb|ABM72178.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 864

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+   H+GH    +I D++ARF R  G  +L   G D  G     AA
Sbjct: 46  KKEKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFQGKSLLHPMGWDAFGLPAENAA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +Y
Sbjct: 106 IERGINPNDWTKKNIAHMKSQLKLLGLSVDWDKEFATCDENYYLWTQFLFLELHKSGLVY 165

Query: 121 K 121
           +
Sbjct: 166 Q 166


>gi|330999223|ref|ZP_08322941.1| valine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329575289|gb|EGG56837.1| valine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 944

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 63/287 (21%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEKISKSL 307
           + P+ + V G DIL F    W A ++      +  +P  K V+ HG +   +G K+SKS 
Sbjct: 491 YLPSSVLVTGYDILFF----WVARMIMMTRFFTGRVPF-KNVYIHGLVRDAEGNKMSKSE 545

Query: 308 GNVIDPIEVIE-------------------------------------EVGVDALRYFLV 330
           GN +DP+++I+                                     E+G DALR+ + 
Sbjct: 546 GNTLDPLDIIQGVDLESLVKKNTTGLRQPEKAPIVERKLSKHYPEGINEIGADALRFTMA 605

Query: 331 REIACGKDGFYD---KDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIP-TPGAFTE 385
                G++  +D    DG +     +  N + N  +R V M ++  D G+ P  P  ++ 
Sbjct: 606 AYATLGRNVNFDVKRADGYR-----NFCNKLWN-ATRFVLMNIEGKDCGLDPNAPMEYSA 659

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR 443
            D+ I S   R +QE+R+  ++  +  A   + S +     D Y +  K  +L + N   
Sbjct: 660 PDQWIWSEFERTVQEVRKAFEDYRLDNAANAIYSFIWNQYCDWYLELSKV-QLNQGNEAV 718

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                +  V V+ Q   L    +P +  +++  + V    R   S+D
Sbjct: 719 QRATRHTLVTVLEQTLRLAHPIIPFITEELWQKVSVVAGVRSENSVD 765



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 21/102 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ----N 76
           H+GHA+   + D L RF+R++G + ++  GTD           +AG+ T++ V++     
Sbjct: 57  HMGHAFNHSVMDSLTRFYRMNGYNTMWLPGTD-----------HAGIATQIVVERKLEAQ 105

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +N RDM        DDF+    K    +   + K++   GD
Sbjct: 106 GKNRRDM------PRDDFVNEIWKWKEYSGGNILKQMRRLGD 141


>gi|261880523|ref|ZP_06006950.1| valine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332746|gb|EFA43532.1| valine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 897

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 29/246 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NPD  + K++ P    + G DI+ F    W A ++ A       LP  K V+  G + 
Sbjct: 493 VNNPDNEEIKYYYPTSDLITGPDIIFF----WVARMIMAGYEYRDTLPF-KHVYFTGIVR 547

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+   ++  N    N
Sbjct: 548 DKLGRKMSKSLGNSPDPLMLIEKFGADGVRMGMMLSAPAGNDILFDESLCEQGRN--FNN 605

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N  +  +    +  D   PT      S     +    V  +I E  +   I  AL  
Sbjct: 606 KIWN--AFRLVQGWETADLAQPTENKLAVS--WFAAKLREVNADINEQFKGYRISEALMT 661

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P+  + +  VT +       +L  +L  F+P +  +
Sbjct: 662 VYRL------FWDEFSSWYLEMIKPEYGNPIDQVTYDATLGFFDELLRMLHPFMPFITEE 715

Query: 473 IFDILF 478
           ++  ++
Sbjct: 716 LWQHIY 721


>gi|171185143|ref|YP_001794062.1| isoleucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934355|gb|ACB39616.1| isoleucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 977

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 24/264 (9%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHVIGKDILR--FHAIYWPAF 278
           Y+M VW+D+   ++         DG +     ++ +P D    G D  R  F+++   A 
Sbjct: 524 YVMDVWLDSGVAWIAAV------DGERNGELWSRLFPYDFVTEGIDQTRGWFYSLLASAM 577

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +     P  K V   G IL K G+K+SKS GNVI   ++ E+ G D +R +++ + A  +
Sbjct: 578 VYVGKAPY-KTVLIQGLILDKHGQKMSKSKGNVIWARDLFEKYGADPVRLYILSKAAPWE 636

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILS 392
           D  +D D +K  + +DL N + N+V  + + +  D       P         E D  +LS
Sbjct: 637 DLAFDPDEVKTTI-SDL-NILWNVVKFADTYMALDGFTAEKYPLEKWLSKALEEDRWLLS 694

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYV 450
             +++++   + M+N   H+A       V E    RY    +     +   D       V
Sbjct: 695 EFNQLVEAFTQYMKNYEFHKAANLWREFVVETLSHRYIRLLRRRVWSEEPSDDKYAAYAV 754

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
              V++ + +L   F P +A  ++
Sbjct: 755 LHHVLKNVIVLGSIFTPFVAEYLW 778



 Score = 40.0 bits (92), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          N  PH+GH       DV+ RFHRL G DV    G D  G  +
Sbjct: 53 NGMPHVGHVRGRTYKDVVLRFHRLLGYDVWPQGGWDMQGMPV 94


>gi|315604680|ref|ZP_07879743.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313692|gb|EFU61746.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 903

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 20/197 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           IM  W  +  +     G+LD+ D   A+ +P DL   G+DI+R    +  + ++ A+L  
Sbjct: 539 IMDTWATSSLSPQLACGWLDDED-LFARTYPMDLRPQGQDIIR---TWLFSTVVRADLEF 594

Query: 287 PKKVFSH----GFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               + H    G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D 
Sbjct: 595 GALPWKHAGLSGWILDSDHK--KMSKSKGNVVTPMGILEKYGSDAVRYWAA-SARLGLDA 651

Query: 340 FYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +D+  +K  +R+   + N     ++        D D  + T       D ++++  SRV
Sbjct: 652 AFDEQQMKIGRRLAIKVLNASKFALTMGGEGAAIDLDPALVT----VPLDRAVVATLSRV 707

Query: 398 LQEIRENMQNQLIHRAL 414
           + E    + +    RAL
Sbjct: 708 IDEASAALASYEHSRAL 724



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   HIGH +     DV+AR+ R+ G  V +  G D++G    +  
Sbjct: 43  REQVYSIDTPPPTVSGSLHIGHVFSYTHTDVVARYQRMMGKSVFYPMGWDDNGLPTERRV 102

Query: 63  QN 64
           QN
Sbjct: 103 QN 104


>gi|15835099|ref|NP_296858.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285268|ref|ZP_06194662.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289286|ref|ZP_06195588.1| leucyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336664|ref|ZP_07224866.1| leucyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878791|sp|Q9PKI4|SYL_CHLMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|7190521|gb|AAF39327.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 819

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKQQLTSMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
               +  Y        +++EV  G   +G Y   +    QW+       R++A+ D+LL 
Sbjct: 150 MADMAVNYCPELGTVLSNEEVENGFSVEGGYPVERRMLRQWV------LRITAFADQLLG 203


>gi|330818072|ref|YP_004361777.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370465|gb|AEA61821.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 945

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 18/230 (7%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A ++    P  K + +HGF +  +G K+SKSLGN IDP
Sbjct: 575 PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY-KGLLTHGFTVDGEGRKMSKSLGNGIDP 633

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV   +G + +R ++      G+    ++  + KRV       I N + R +   L D+
Sbjct: 634 HEVSNRLGAEIVRLWIASTDYSGELAISEE--ILKRVTEGYRR-IRNTL-RFLLANLSDF 689

Query: 374 D-GMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           D      P A + E D   ++  +++  E+  + +    H  +A++ +  SE     Y D
Sbjct: 690 DYAKDALPAAEWLEIDRYAIAFSAQLQTELLAHYEKYEFHPIVAKLQTYCSEDLGGFYLD 749

Query: 430 AQKP--WELKKTNPDR--ASTVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
             K   +     +P R  A T LY VT  ++R LA  L +F  + A K+F
Sbjct: 750 VLKDRLYTSAPASPARRSAQTALYHVTQGLLRVLAPFL-SFTAEEAWKVF 798



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|312377435|gb|EFR24267.1| hypothetical protein AND_11274 [Anopheles darlingi]
          Length = 877

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I+D +ARF+RL+G +VL   G D  G     AA
Sbjct: 24  DKPKRYVLAMFPYPSGNLHMGHVRVYTISDAMARFYRLNGANVLHPMGWDAFGLPAENAA 83

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    +  +N    R   ++L  S+D
Sbjct: 84  IQRRIPADTWTHRNIAEMRKQLEMLAFSFD 113


>gi|298386935|ref|ZP_06996489.1| leucine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298260085|gb|EFI02955.1| leucine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 944

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 11/119 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    Q
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGFNVLNPMGYDAYGLPAEQ 87

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              +  Q+  +TTK  +D+    +R+  D +  S+D    IRT E  ++   +  ++K+
Sbjct: 88  YAIQTGQHPAITTKANIDR----YREQLDKIGFSFDWSREIRTCEPEYYHWTQWAFQKM 142


>gi|281206004|gb|EFA80193.1| leucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 912

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 18/197 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y  +   YP+   H+GH     ++D +AR  R+ G  V+   G D  G     AA + 
Sbjct: 50  KYYSLSQFPYPSGNLHMGHVRVYTMSDCVARLKRMQGYQVVHPMGWDAFGLPAENAAIDK 109

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V+  ++ +QN +        LD+ +D       +R   TC   + + +   DI+   YS
Sbjct: 110 QVSPALWTNQNIQQMTTQLKRLDLQFD------WERELSTCSPDYYRWTQ--DIFLRLYS 161

Query: 126 GWYSLRDEAYYNDDEV------YKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKL-- 176
              + R  +  N D V       +  D Q  + + N  V+  E + ++F+++ Y D+L  
Sbjct: 162 KGLAYRKHSPVNWDPVDQTVLANEQVDSQGRSWRSNALVERREMKQWYFKITEYADRLAD 221

Query: 177 -LSYYESHPEFILPIER 192
            L      PE +  ++R
Sbjct: 222 DLDKLTGWPEDVKTMQR 238



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/203 (19%), Positives = 91/203 (44%), Gaps = 28/203 (13%)

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P P    +   +    EK+SKS  N +DP E+I++ G D L+ +++ +        +D D
Sbjct: 636 PKPINKLTGNLVNITLEKMSKSKLNGVDPNEMIDKYGSDTLKLYILFKAPPENSLEWDTD 695

Query: 345 GLK------KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
           G++      KRV + ++  +    +  +S +   ++  + +    T S           +
Sbjct: 696 GIEGCRKWLKRVESLVSGYVAERNNGQISKVSDKWNTQLNSLRYDTHSS----------I 745

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E++     + A++ +++L +++ +Y          + N D  S+  Y  +E +  L
Sbjct: 746 EKVTESIDRYTFNTAISFLMTLSNQIGKY----------QNNVDDKSSREY--LEALETL 793

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
            +LL  F P  + +++  L   D
Sbjct: 794 VVLLAPFAPNASQQLWTELKSID 816


>gi|210135724|ref|YP_002302163.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133692|gb|ACJ08683.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 806

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELL 199



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKNGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAINP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|149728716|ref|XP_001500886.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Equus caballus]
          Length = 903

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N +DP EV+E+ G+D +R +L+      KD  +D       V  D   G+  
Sbjct: 638 EKMSKSKHNGVDPEEVVEQYGLDTIRLYLLFAAPPEKDILWD-------VKTDALPGVLR 690

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-------- 408
               L S +   I     G +P P   ++ +++     +R L E + ++ +Q        
Sbjct: 691 WQQRLWSLATRFIEARASGKVPRPQLLSDEEKAE----ARKLWEYKNSVISQVTAHFTDD 746

Query: 409 -LIHRALAQVISLVSEV 424
            L++ A++ ++ L S +
Sbjct: 747 FLLNSAISHLMGLSSAL 763


>gi|91078378|ref|XP_974191.1| PREDICTED: similar to Leucyl-tRNA synthetase CG7479-PA [Tribolium
           castaneum]
 gi|270003885|gb|EFA00333.1| hypothetical protein TcasGA2_TC003172 [Tribolium castaneum]
          Length = 866

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+ +   YP+   H+GH     I+DV+ARF R++G +V+   G D  G     AA 
Sbjct: 61  RDKYYVLSMFPYPSGSLHMGHVRVYTISDVIARFQRMNGKNVIHPIGWDAFGLPAENAAI 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N  + +     L  S++    + T +  ++   + L+ K+ D G +Y+
Sbjct: 121 ERQIAPQDWTQSNISHMKSQLQRLGCSFEWGRELATCDPSYYKWTQDLFLKLYDSGLVYQ 180


>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAV--LLERDDLQR----PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF L  +G K+SKS+GNV+ P +V+ ++G D LR ++ 
Sbjct: 576 PY-KGVLSHGFTLDGEGRKMSKSIGNVVVPAKVMNQLGADILRLWVA 621



 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 30/69 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   HIGHA   I+ D + R   + G +  +  G D HG  I +A
Sbjct: 45  KGRPMFVLHDGPPYANGDIHIGHALNKILKDFIVRSKSMTGYNAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK 70
             N GV  K
Sbjct: 105 LTNKGVKRK 113


>gi|289191087|gb|ADC93656.1| aminoacyl tRNA synthetase AK-2 [synthetic construct]
          Length = 860

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|295677677|ref|YP_003606201.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437520|gb|ADG16690.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 863

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 16/183 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 91  MANNVPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y D+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYADE 201

Query: 176 LLS 178
           LL+
Sbjct: 202 LLN 204


>gi|218960887|ref|YP_001740662.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729544|emb|CAO80456.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 1041

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 29/291 (9%)

Query: 205 KDLSLSRKTFD-------WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFW 256
           +DL L R   D        G K+   P+ ++  W D+ +       Y  +N +  + + +
Sbjct: 489 EDLDLHRPYIDEVVLTCSCGNKMYRTPE-VIDCWFDSGSMPFAQWHYPFENYENFEPELF 547

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD+   G D  R  F+++   + LL   +   K    +  IL K G K+SKS GN +DP
Sbjct: 548 PADIISEGIDQTRGWFYSMLAISTLLKG-VSSYKSCLVNELILDKNGRKMSKSHGNAVDP 606

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IE+++  G DA+R++L+          +D DG+K+     L   IG L  ++V      Y
Sbjct: 607 IELMQNYGADAIRWYLLEVSPPWVPTRFDVDGVKEI----LGKFIGTL--KNVYSFFATY 660

Query: 374 ---DGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV 424
              DG +     +      E D  I+S    ++  +R   ++    +A+  + S V  E+
Sbjct: 661 ANIDGFVAINYPYNWEREVEIDRWIVSRLHSLIIAVRHYFESYDFTKAVRAIQSFVIDEL 720

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
             ++  +       +  D+     Y T+ +V+ + A L+  F P LA ++F
Sbjct: 721 SNWYVRRSRRRFWASGFDQDKIDAYRTLYQVLVETAKLIAPFAPYLAEELF 771


>gi|144898684|emb|CAM75548.1| Isoleucyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 949

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D   +  T    L+  + S  K WPA L++ G D  R  FH+    +       
Sbjct: 554 VLDVWFD---SGCTHAFVLEGEEWSDTK-WPASLYLEGSDQHRGWFHSSLLESCGTRGRA 609

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF+L + G K+SKSLGNV+ P EV+   G D LR ++V
Sbjct: 610 PY-DAVLTHGFVLDEDGRKMSKSLGNVVSPQEVVGTQGADILRLWVV 655



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K REK  +     Y N   HIGHA   I+ DV+ R   + G DV +  G D HG  I
Sbjct: 47  KGREKFMLHDGPPYANGHLHIGHALNKILKDVINRTQFMLGHDVHYIPGWDCHGLPI 103


>gi|229007086|ref|ZP_04164712.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754131|gb|EEM03550.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 802

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNSPAEFTEKNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGLA 148

Query: 120 Y 120
           Y
Sbjct: 149 Y 149



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++   G D LR +
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLY 602


>gi|150403520|ref|YP_001330814.1| valyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150034550|gb|ABR66663.1| valyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 886

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 17/137 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDT 105
            +     TK                D+N    R+    L IS D   ++I T    +   
Sbjct: 91  VEELNNITKSDIDRHEFRRLCVELTDENVEKMRNQVKSLGISIDWDREYI-TMNPDYVRK 149

Query: 106 CRILWKKISDKGDIYKG 122
            +  + K+ +KG IY+G
Sbjct: 150 SQTAFLKMYEKGLIYRG 166



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y    +  ++   
Sbjct: 452 VLDTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYTIVRSLAITGEK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  + V +       G K+SKS GNV++P E+ +  G DALR +
Sbjct: 511 PWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW 554


>gi|324503594|gb|ADY41558.1| Leucyl-tRNA synthetase [Ascaris suum]
          Length = 876

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I+DV+AR++RL G +V+   G D  G     AA   
Sbjct: 62  KKYILSMFPYPSGNLHMGHMRVYTISDVIARYYRLSGFNVIHPMGWDAFGLPAENAAVER 121

Query: 66  GVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           GV  + +   N +  R+  +   +   +D  I T    ++   + ++ ++ D G +Y+ 
Sbjct: 122 GVDPEEWTHSNIKTMREQLLKTGIIFDWDREILTCSPEYYRWTQWIFCRLYDHGLVYRS 180


>gi|307719273|ref|YP_003874805.1| isoleucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532998|gb|ADN02532.1| isoleucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 1048

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 23/242 (9%)

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILHKG 300
           P  +K KF   +PAD    G D  R    ++   +LS  L    P    + +   +   G
Sbjct: 540 PFENKEKFERHFPADFVCEGIDQTR--GWFYTLLVLSTALFDKPPFLNNITTGLVLAADG 597

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK---KRVNADLAN 356
           +K+SKS  N  DP +VIE  G DALR FL+   +   ++  Y  +G++   K V   L N
Sbjct: 598 KKMSKSERNYTDPKDVIETFGADALRLFLMHSAVVRAEELRYSDEGVREVLKNVLIPLWN 657

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRA 413
                V+ +      + DG+ PT      +   D  ILS   R++  + E M    + RA
Sbjct: 658 AYAFFVTYA------NIDGIRPTAPPEDPAHPLDRWILSEAQRLVLTVTEEMDRYDLVRA 711

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANK 472
           +  +++ +  ++ ++  +      K+  D      Y T+  V+  L  +    VP +  +
Sbjct: 712 IDPIVAFIDSLNNWYIRRSRRRFWKSESDADKREAYATLWTVLMTLVKVAAPIVPFITEE 771

Query: 473 IF 474
           I+
Sbjct: 772 IY 773


>gi|294101952|ref|YP_003553810.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616932|gb|ADE57086.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 926

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++ +    L+     K   WPAD+++ G D  R  F      +  +    
Sbjct: 532 IMDVWFDSGVSHFSV---LETRPELK---WPADMYLEGSDQHRGWFQTSLLTSVAIRKKA 585

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + V +HGFI+  +G+K+SKSLGNV+ P EV+++ G D LR ++
Sbjct: 586 PY-RNVLTHGFIVDGEGKKMSKSLGNVVRPQEVVDKYGADILRLWV 630


>gi|228993492|ref|ZP_04153401.1| Leucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766207|gb|EEM14852.1| Leucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 802

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNSPAEFTEKNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGLA 148

Query: 120 Y 120
           Y
Sbjct: 149 Y 149



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 20/116 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFIL-H 298
           D  K K W P D+++ G +    H +Y   W   L    + +P K     +F+ G IL  
Sbjct: 514 DPEKVKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGV-VPTKEPFQQLFNQGMILGE 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK 348
             EK+SKS GNV++P +++   G D LR +      L   IA  ++G    DG ++
Sbjct: 573 NNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---DGARR 625


>gi|325133537|gb|EGC56200.1| leucyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 910

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|315186805|gb|EFU20563.1| Isoleucyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 1048

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 23/242 (9%)

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILHKG 300
           P  +K KF   +PAD    G D  R    ++   +LS  L    P    + +   +   G
Sbjct: 540 PFENKEKFERHFPADFVCEGIDQTR--GWFYTLLVLSTALFDEPPFLNNITTGLVLAADG 597

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK---KRVNADLAN 356
           +K+SKS  N  DP +VIE  G DALR FL+   +   ++  Y  +G++   K V   L N
Sbjct: 598 KKMSKSERNYTDPKDVIETFGADALRLFLMHSAVVRAEELRYSDEGVREVLKNVLIPLWN 657

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRA 413
                V+ +      + DG+ PT      +   D  ILS   R++  + E M    + RA
Sbjct: 658 AYAFFVTYA------NIDGIRPTAPPEDPAHPLDRWILSEAQRLVLTVTEEMDRYDLVRA 711

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANK 472
           +  +++ +  ++ ++  +      K+  D      Y T+  V+  L  +    VP +  +
Sbjct: 712 IDPIVAFIDSLNNWYIRRSRRRFWKSESDADKREAYATLWTVLMTLVKVAAPIVPFITEE 771

Query: 473 IF 474
           I+
Sbjct: 772 IY 773


>gi|294670517|ref|ZP_06735397.1| hypothetical protein NEIELOOT_02239 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307796|gb|EFE49039.1| hypothetical protein NEIELOOT_02239 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 557

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 8/78 (10%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLP----KKVFSHGFIL-HKGEKISKSLGNV 310
           WPADL++ G D    H  ++ + +L+    L     K++ +HGF++   G K+SKSLGNV
Sbjct: 413 WPADLYLEGSDQ---HRGWFQSSMLTGCATLGRAPYKQLLTHGFVVDQNGRKMSKSLGNV 469

Query: 311 IDPIEVIEEVGVDALRYF 328
           + P EV  E G D LR +
Sbjct: 470 VAPQEVYNEFGADILRLW 487


>gi|148377486|ref|YP_001256362.1| isoleucyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|254782420|sp|A5IY09|SYI_MYCAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148291532|emb|CAL58918.1| Isoleucyl tRNA synthetase (Isoleucine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 892

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T  L     +D     K K  P DL++ G D  R  F++    +   +   
Sbjct: 523 IMDVWFDSGTTSLAVE--ID----EKLKP-PYDLYLEGSDQYRGWFNSSLINSVAYTHKS 575

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K++ SHGF+L  KGEK+SKS GNV+DP++VI++ G D LR ++
Sbjct: 576 PY-KQIVSHGFVLDSKGEKMSKSKGNVVDPLKVIKKYGADILRLWV 620



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKIAKAAQNAGVTT 69
           Y N   HIGHA   I+ D++ R+  + G    +  G D HG     + +  A  N  V +
Sbjct: 61  YANGSIHIGHALNKILKDIIVRYKSMCGFYSPYVPGWDTHGLPIELKMLTDAKINYKVIS 120

Query: 70  KVFVDQNSRNFRDMADVLDIS----------YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            + + + +  + D+     IS          +    +T E +       L+KK+   G +
Sbjct: 121 PIELRKRASEYADIQIENQISQFKSLQLLTDFKKIYKTKEPKFEAAQLKLFKKMVLDGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG    ++S   +    + EV
Sbjct: 181 YKGLKPVYWSPSSQTALAEAEV 202


>gi|94269498|ref|ZP_01291478.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451195|gb|EAT02106.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 889

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 23/265 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +     K  F+P  + +   DIL     +W A ++   L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPEQTRELKM-FYPTSVLITSFDIL----FFWVARMMMMGLHF 505

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + V+ H  +  K G+K+SKS GNV+DP+E+++  G DALR+ +    A G++  
Sbjct: 506 MDEVPFRHVYLHALVRDKHGQKMSKSKGNVLDPLELMDRYGTDALRFTMAAFAAQGREIK 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD------YDGMIPTPGAFTESDESILSVC 394
             ++ ++   +    N + N  +R   M L D       D +       +  D  ILS  
Sbjct: 566 LAEERIEGYRH--FINKLWN-AARFTLMQLDDEGRSATEDALASDSATLSLPDRWILSRS 622

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           SRV   +   + +   + A +     V +   D Y +  KP EL    P        V +
Sbjct: 623 SRVAAAVGGALDDFRFNDAASAAYQFVWKEFCDWYLEWIKP-ELYGDEPAAVERSRRVLL 681

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+  +  +L   +P +  +I+  L
Sbjct: 682 TVLEDILKMLHPMIPFVTEEIWHAL 706



 Score = 40.0 bits (92), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +K   S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G     
Sbjct: 35  DEDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAG----I 90

Query: 61  AAQNAGVTTKVFVDQN 76
           A QN  V  +   DQ 
Sbjct: 91  ATQN--VVERQLADQG 104


>gi|99082229|ref|YP_614383.1| isoleucyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99038509|gb|ABF65121.1| Isoleucyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 974

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 18/164 (10%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI---MYV 230
           D LL   E +   I   E  N    + + G K+  L       GI  PDD + +   + V
Sbjct: 531 DYLLRNSEVNARIIAAFEE-NGADVWYEDGFKEKVLE------GIVAPDDYEQVFDVLDV 583

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPK 288
           W D+ + +       D  DG++     AD+++ G D  R  FH+    A       P  +
Sbjct: 584 WFDSGSTHAFV--LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSLLQASATKGRAPY-R 638

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            V +HGF L  KG K+SKSLGN I P E++++ G D LR ++ +
Sbjct: 639 NVVTHGFTLDEKGMKMSKSLGNTIVPEEIVKQYGADILRLWVAQ 682



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG        
Sbjct: 55  RQPFVLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDSRYVPGWDCHGLPIEWKIE 114

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++  K  +N      +   Q  R F +    +DI  ++F R
Sbjct: 115 EQYRKKGKNKDAVPVIEFRQECRKFAE--GWIDIQREEFKR 153


>gi|331701068|ref|YP_004398027.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128411|gb|AEB72964.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 934

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+     K   +PAD+++ G D  R  F++    +  +S   
Sbjct: 526 IMDVWFDSGSSH---QGVLEE---RKELTYPADMYLEGSDQYRGWFNSSLITSVAVSGKA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF L   G K+SKSLGN I PI+VI+++G + +R ++ 
Sbjct: 580 PY-KQVVSQGFTLDGNGHKMSKSLGNTIAPIDVIKKMGAEIVRLWVT 625



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 58  YANGDIHMGHALNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYDRKKMST 117

Query: 75  QNSRNF-RDMA 84
            + R   RD A
Sbjct: 118 NDFRKLCRDYA 128


>gi|298737166|ref|YP_003729696.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356360|emb|CBI67232.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 806

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAITP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|297835664|ref|XP_002885714.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331554|gb|EFH61973.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1036

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 60/309 (19%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +    L+  G+ D  +  KA F+P  +   G DIL     +W A
Sbjct: 546 LELSQDPD-VLDTWFSSGLFPLSVLGWPDETEDFKA-FYPTSVLETGHDIL----FFWVA 599

Query: 278 FLL-------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVI------------ 317
            ++         ++P  +KVF H  I    G K+SKSLGN IDP+EVI            
Sbjct: 600 RMVMLGMKVGGGDVPF-RKVFLHPMIRDAHGRKMSKSLGNGIDPLEVINGVTLAGLHARL 658

Query: 318 EEVGVDALRYFLVRE----------IACGKD----GFYDKDGLKKRVNADLANGIG---- 359
           EE  +D     + +E            CG D              ++N D+   +G    
Sbjct: 659 EEGNLDPKELVVAKEGQVKDFPNGIPECGADSLRFALVSYTAQSDKINMDVLRVVGYRQW 718

Query: 360 -NLVSRSVSM-ILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            N +  +V   ++K  DG  P     +PGA   S + ILSV +  + +  ++++   +  
Sbjct: 719 CNKLWNAVRFAMMKLGDGYTPPSQALSPGAMPFSCQWILSVLNTAISKTVDSLKAFELSD 778

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPK 468
           A   V +       D + +A KP+     NP R  A   L+V +E   +   LL  F+P 
Sbjct: 779 AANTVYAWWQYQFCDVFIEAVKPY-FSAENPGRTHAQDALWVCLETGLR---LLHPFMPF 834

Query: 469 LANKIFDIL 477
           +  +++  L
Sbjct: 835 VTEELWQRL 843


>gi|308185334|ref|YP_003929467.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308061254|gb|ADO03150.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 806

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAINP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|303257377|ref|ZP_07343391.1| valine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860868|gb|EFL83945.1| valine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 944

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 63/287 (21%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILH-KGEKISKSL 307
           + P+ + V G DIL F    W A ++      +  +P  K V+ HG +   +G K+SKS 
Sbjct: 491 YLPSSVLVTGYDILFF----WVARMIMMTRFFTGRVPF-KNVYIHGLVRDAEGNKMSKSE 545

Query: 308 GNVIDPIEVIE-------------------------------------EVGVDALRYFLV 330
           GN +DP+++I+                                     E+G DALR+ + 
Sbjct: 546 GNTLDPLDIIQGVDLESLVKKNTTGLRQPEKAPIVERKLRKHYPEGINEIGADALRFTMA 605

Query: 331 REIACGKDGFYD---KDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIP-TPGAFTE 385
                G++  +D    DG +     +  N + N  +R V M ++  D G+ P  P  ++ 
Sbjct: 606 AYATLGRNVNFDVKRADGYR-----NFCNKLWN-ATRFVLMNIEGKDCGLDPNAPMEYSA 659

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR 443
            D+ I S   R +QE+R+  ++  +  A   + S +     D Y +  K  +L + N   
Sbjct: 660 PDQWIWSEFERTVQEVRKAFEDYRLDNAANAIYSFIWNQYCDWYLELSKV-QLNQGNEAV 718

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                +  V V+ Q   L    +P +  +++  + V    R   S+D
Sbjct: 719 QRATRHTLVTVLEQTLRLAHPIIPFITEELWQKVSVVAGVRSENSVD 765



 Score = 43.9 bits (102), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 21/102 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ----N 76
           H+GHA+   + D L RF+R++G + ++  GTD           +AG+ T++ V++     
Sbjct: 57  HMGHAFNHSVMDSLTRFYRMNGYNTMWLPGTD-----------HAGIATQIVVERKLEAQ 105

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +N RDM        DDF+    K    +   + K++   GD
Sbjct: 106 GKNRRDM------PRDDFVNEIWKWKEYSGGNILKQMRRLGD 141


>gi|299535363|ref|ZP_07048685.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729124|gb|EFI69677.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 805

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + A
Sbjct: 30  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 90  LDTGNDPAEFTAKNIATFKRQIQELGFSYDWDREINTTDPAYYKWTQWIFIQLYKKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV+    + +  +++AY D+L+  
Sbjct: 150 VDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLIDD 204

Query: 180 YES--HPEFILPIER 192
            E    PE I  ++R
Sbjct: 205 LEEVDWPESIKDMQR 219



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 19/192 (9%)

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFS 292
           T T  + +P+  K ++ P D+++ G +    H +Y   W   L    +   K    K+F+
Sbjct: 507 TNTEAIADPELLK-RWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFN 565

Query: 293 HGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G IL +G EK+SKS GNV++P E+I   G D LR + +          +  +GL     
Sbjct: 566 QGMILGEGNEKMSKSKGNVVNPDEIITSHGADTLRLYEMFMGPLEASVAWSTNGL----- 620

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
               +G    + R   + + + DG I +      +D+S+     + ++++ E+ +    +
Sbjct: 621 ----DGARRFLDRIWRLFVNEEDGAI-SAKIQVSNDQSLEKSYHQTVKKVTEDYEGIRFN 675

Query: 412 RALAQVISLVSE 423
            A++Q++  +++
Sbjct: 676 TAISQMMVFIND 687


>gi|208435427|ref|YP_002267093.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208433356|gb|ACI28227.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 806

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   +L  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYIHLDEPFKQLITQGMVLKNGTKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNL 361
           GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I   
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAITPT 636

Query: 362 VSR 364
            S+
Sbjct: 637 TSK 639


>gi|320096120|ref|ZP_08027718.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976941|gb|EFW08686.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 977

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R+  +I     YP+ +  H+GH    I  D LARF R++G +VL+T G D  G    
Sbjct: 48  LAGRDPYFILDMFPYPSGKGLHVGHPLGYIATDTLARFRRMNGDNVLYTMGYDAFGLPAE 107

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    V  DQN  N R     + +S+D
Sbjct: 108 QYAVQTGQHPAVTTDQNIANMRRQLRRMGLSHD 140


>gi|304382120|ref|ZP_07364631.1| valine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336718|gb|EFM02943.1| valine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 879

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 35/249 (14%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN----LPLP-KKVFSHGFILH 298
           +++PD    K++ P    V G DI+ F    W A ++ A       +P K V+  G +  
Sbjct: 475 INHPDNEDIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYKCKMPFKNVYFTGIVRD 530

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSLGN  DPIE+I++ G D +R  ++     G D  +D+   ++  N    N 
Sbjct: 531 KLGRKMSKSLGNSPDPIELIDKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--FNNK 588

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR----VLQEIRENMQNQLIHRA 413
           I N         + D +          +SD S   + SR     L+E  E + +      
Sbjct: 589 IWNAFRLVKGWEVADTE----------QSDAS--RIASRWFEAKLRETNEELNDLFSKYR 636

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKL 469
           +++ + +V  +  ++D    W L+   P   + +      +T+     L  +L  F+P +
Sbjct: 637 ISEALMVVYRL--FWDEFSGWYLEMIKPAYGTAIDRVSYNITLRFFETLLNMLHPFMPFI 694

Query: 470 ANKIFDILF 478
             +++  LF
Sbjct: 695 TEELWQHLF 703


>gi|282877227|ref|ZP_06286065.1| isoleucine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300719|gb|EFA93050.1| isoleucine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 1223

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 40/268 (14%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK LGNV 
Sbjct: 730 FFPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHLGNVK 788

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRSVSM 368
           +P ++IE+ G DA+R++++   A   +  +D++G   ++++    L N      + S   
Sbjct: 789 NPFDMIEKYGADAVRFYMMTNSAPWDNLKFDEEGVDEVRRKFFGTLYN------TYSFFA 842

Query: 369 ILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           +  + DG  PT      G   E D  I+S  + +++ +   +      RA   + S V+ 
Sbjct: 843 LYANVDGFDPTTTHSNRGQAPEIDLWIISKLNSLIKNVETALNGYDPTRAGRMIDSFVND 902

Query: 423 EVDRYF---DAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIF--- 474
           ++  ++   + ++ W  K+ + D+ S    LY  +  + +   LL  F P  A++++   
Sbjct: 903 DLSNWYVRLNRKRFWG-KEMSADKRSAYHTLYTCLMTVSK---LLAPFAPFYADRLYLDL 958

Query: 475 ---------DILFVADENRCFQSLDQRL 493
                    +   VADE    + L+ R+
Sbjct: 959 GGKAESVHLERFPVADEQLVNEDLEARM 986


>gi|167648985|ref|YP_001686648.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082990|sp|B0T6E7|SYL_CAUSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167351415|gb|ABZ74150.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 861

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  RPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFNVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV  K +   N    R+    L +S D   +F  T +  ++   +  +  +  +G +Y
Sbjct: 92  ERGVHPKGWTYDNIAAMREQLKALGLSIDWSREFA-TCDPEYYGKQQAWFLHLLKRGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   S  +   D     +++V    DG+ + +    V+  +   +F R++ Y D L+
Sbjct: 151 RKEASVNWDPVDMTVLANEQVI---DGKGWRSGAT-VEKRKLTQWFLRITDYADALI 203


>gi|325977750|ref|YP_004287466.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177678|emb|CBZ47722.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 932

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +G +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNAREGLE---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEIPL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I    +      R+    ++DKG 
Sbjct: 118 TEYLEMCREYALSQVDKQREDFKRLGVSADWE-NPYITLIPEYEAAQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|306832986|ref|ZP_07466118.1| isoleucine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424885|gb|EFM28019.1| isoleucine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 932

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +G +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNAREGLE---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEIPL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I    +      R+    ++DKG 
Sbjct: 118 TEYLEMCREYALSQVDKQREDFKRLGVSADWE-NPYITLIPEYEAAQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|301065901|ref|YP_003787924.1| leucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438308|gb|ADK18074.1| Leucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 803

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 32/159 (20%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL      +P K     +F+ G IL  
Sbjct: 513 DYDKLKAWMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGA-IPNKEPFQRLFNQGMILGD 571

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG------------- 339
             EK+SKS GNV++P +V++E G D LR +      L   IA    G             
Sbjct: 572 NHEKMSKSKGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGLAGARKFLDRVWS 631

Query: 340 -FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            F D +G L+ R+       +  + + +V  + +DYD +
Sbjct: 632 AFIDDEGKLRDRITTINDGRLDKVYNETVKKVTEDYDAL 670


>gi|257464108|ref|ZP_05628491.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061625|ref|ZP_07926110.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 931

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  +G     WPADL++ G D  R  F      +       
Sbjct: 532 IMDVWFDSGSSHRAV---LETWEGL---HWPADLYLEGSDQHRGWFQTSLLTSVGSRGTA 585

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  KK+ +HGF+   KGEK+SKS GNV+ P ++I++ G D LR +
Sbjct: 586 PF-KKILTHGFVNDGKGEKMSKSKGNVVAPEKIIKQYGADILRLW 629



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K +E   +     Y N   HIGHA   I+ D++ ++  L G    +  G D HG  I  K
Sbjct: 46  KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADV-----LDISYDDFIR 96
             +  G   K   D  +   R +        +DI  ++FIR
Sbjct: 106 VMEKLGSKAK---DMTALEIRKLCKEYALRWVDIQREEFIR 143


>gi|270291589|ref|ZP_06197809.1| leucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270279908|gb|EFA25746.1| leucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 805

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 13/183 (7%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ Q  H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 28  EQKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F   N +NF+     L  SYD    + TT+  ++   + +++++  KG 
Sbjct: 88  YAMKTGNNPKDFTAHNIKNFKRQIQSLGFSYDWSREVNTTDPEYYKWTQWIFEQLYKKGL 147

Query: 119 IY-KGCYSGWY-SLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            Y K     W   L       ++EV  G    G +      PV     + +  +++AY D
Sbjct: 148 AYEKETLVNWAPDLMGGTVVANEEVVNGKTERGGF------PVYRKPMKQWILKITAYAD 201

Query: 175 KLL 177
           +L+
Sbjct: 202 RLI 204



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 51/235 (21%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLG 308
           P DL+V G +    H +Y   W   L    +   K+ F    + G IL    EK+SKS G
Sbjct: 524 PVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKG 583

Query: 309 NVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           NV++P +++E  G D LR +      L   +A  ++G        +RV   + +   +L 
Sbjct: 584 NVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSEEGLNGSRKWIERVWRLMIDDNNHLR 643

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R ++MI                +D  +  + ++ ++++ E+ +N   + A++Q++  V+
Sbjct: 644 DR-ITMI----------------NDHKLDLIYNQTVKKVTEDYENMRFNTAISQMMVFVN 686

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E                   +A  +  V +E    L  LL   VP +A +I+ I+
Sbjct: 687 EA-----------------YKADALPMVYME---GLVKLLSPIVPHVAEEIWQIM 721


>gi|237752079|ref|ZP_04582559.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376646|gb|EEO26737.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 821

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 20/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K YI +   YP+   H+GH     I+D +AR  R DG +VL   G D  G     A
Sbjct: 28  KSLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARKFRKDGYNVLHPIGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------I 113
           A       K +   N +N +     L  S+      ++ R   TC +++ K        +
Sbjct: 88  AIKHKTHPKKWTYSNIKNMKSQLYSLGFSF------SKTRELATCDLIYSKWEQSFFIAM 141

Query: 114 SDKGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +KG IY K  +  W    D+    +++V +G   +       PV   E   Y+ +++ Y
Sbjct: 142 WEKGLIYRKKGFLNWCP-NDQTVLANEQVIEGKCWRC----DTPVVQKEMYQYYIKITDY 196

Query: 173 QDKLL 177
            ++LL
Sbjct: 197 AEELL 201



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +   G K+SKS GNV+DP E+I + G D  R F++
Sbjct: 576 LLTQGMVTKDGAKMSKSKGNVVDPSEIITQFGADTARLFIL 616


>gi|239631095|ref|ZP_04674126.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525560|gb|EEQ64561.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 803

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 32/159 (20%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL      +P K     +F+ G IL  
Sbjct: 513 DYDKLKAWMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGA-IPNKEPFQRLFNQGMILGD 571

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG------------- 339
             EK+SKS GNV++P +V++E G D LR +      L   IA    G             
Sbjct: 572 NHEKMSKSKGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGLAGARKFLDRVWS 631

Query: 340 -FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            F D +G L+ R+       +  + + +V  + +DYD +
Sbjct: 632 AFIDDEGKLRDRITTINDGRLDKVYNETVKKVTEDYDAL 670


>gi|304384541|ref|ZP_07366887.1| leucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328735|gb|EFL95955.1| leucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 809

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 13/183 (7%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ Q  H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 32  EQKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQ 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F   N +NF+     L  SYD    + TT+  ++   + +++++  KG 
Sbjct: 92  YAMKTGNNPKDFTAHNIKNFKRQIQSLGFSYDWSREVNTTDPEYYKWTQWIFEQLYKKGL 151

Query: 119 IY-KGCYSGWY-SLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            Y K     W   L       ++EV  G    G +      PV     + +  +++AY D
Sbjct: 152 AYEKETLVNWAPDLMGGTVVANEEVVNGKTERGGF------PVYRKPMKQWILKITAYAD 205

Query: 175 KLL 177
           +L+
Sbjct: 206 RLI 208



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 51/235 (21%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLG 308
           P DL+V G +    H +Y   W   L    +   K+ F    + G IL    EK+SKS G
Sbjct: 528 PVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKG 587

Query: 309 NVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           NV++P +++E  G D LR +      L   +A  ++G        +RV   + +   +L 
Sbjct: 588 NVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSEEGLNGSRKWIERVWRLMIDDNNHLR 647

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R ++MI                +D  +  + ++ ++++ E+ +N   + A++Q++  V+
Sbjct: 648 DR-ITMI----------------NDHKLDLIYNQTVKKVTEDYENMRFNTAISQMMVFVN 690

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E                   +A  +  V +E    L  LL   VP +A +I+ I+
Sbjct: 691 EA-----------------YKADALPMVYME---GLVKLLSPIVPHVAEEIWQIM 725


>gi|293189669|ref|ZP_06608386.1| valyl-tRNA synthetase [Actinomyces odontolyticus F0309]
 gi|292821407|gb|EFF80349.1| valyl-tRNA synthetase [Actinomyces odontolyticus F0309]
          Length = 903

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 20/197 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           IM  W  +  +     G+LD+ D   A+ +P DL   G+DI+R       + ++ ANL  
Sbjct: 539 IMDTWATSSLSPQLACGWLDDED-LFARTYPMDLRPQGQDIIRTWLF---STVVRANLEF 594

Query: 287 PKKVFSH----GFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               + H    G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D 
Sbjct: 595 GALPWKHAGLSGWILDSDHK--KMSKSKGNVVTPMGILEKYGSDAVRYWAA-SARLGLDA 651

Query: 340 FYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +D+  +K  +R+   + N     ++        D D  + T       D S+L+  + V
Sbjct: 652 AFDEQQMKIGRRLAIKVLNASKFALTMGGEGAAIDLDPALVT----VPLDRSVLAALASV 707

Query: 398 LQEIRENMQNQLIHRAL 414
           + E    +      RAL
Sbjct: 708 IDEASAALAAYEHSRAL 724



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   HIGH +     DV+AR+ R+ G  V +  G D++G    +  
Sbjct: 43  REQVYSIDTPPPTVSGSLHIGHVFSYTHTDVVARYQRMTGKSVFYPMGWDDNGLPTERRV 102

Query: 63  QN 64
           QN
Sbjct: 103 QN 104


>gi|217033844|ref|ZP_03439269.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
 gi|216943742|gb|EEC23185.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
          Length = 806

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLV 330
           GNV+ P E++++ G DA R F++
Sbjct: 578 GNVVSPKEILKKYGADAARLFIL 600


>gi|218249873|ref|YP_002375236.1| valyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|218165061|gb|ACK75122.1| valyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 875

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I+E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIIDEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKSLLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|147773742|emb|CAN74190.1| hypothetical protein VITISV_036142 [Vitis vinifera]
          Length = 893

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D+LARF R+ G +VL   G D  G    + A
Sbjct: 34  KPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+   +N   FR     L  SYD    I T E  ++   + ++ ++  +G  Y
Sbjct: 94  IETGTHPKITTTRNIARFRSQLKSLGFSYDWEREISTIEPEYYKWTQWIFLQLLKRGLAY 153

Query: 121 KG 122
           + 
Sbjct: 154 QA 155


>gi|317013358|gb|ADU83966.1| leucyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 806

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV 330
            GNV+ P E++++ G DA R F++
Sbjct: 577 KGNVVSPKEILKKYGADAARLFIL 600


>gi|186477336|ref|YP_001858806.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691294|sp|B2JGX6|SYL_BURP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|184193795|gb|ACC71760.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 864

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 16/183 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV    +   N     +  + M   +D S +  + T    ++   + ++ K+ +KG 
Sbjct: 91  MANGVPPAKWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWIFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y D+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYADE 201

Query: 176 LLS 178
           LL+
Sbjct: 202 LLN 204


>gi|159900932|ref|YP_001547179.1| leucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|254782502|sp|A9AZ11|SYL_HERA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|159893971|gb|ABX07051.1| leucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 814

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 17/199 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  T + YP+   HIGH Y M  +DV AR+ R+ G +V F  G D  G     AA
Sbjct: 31  DKPKHYAVTMLPYPSGNLHIGHWYAMSPSDVHARYMRMRGYNVFFPMGFDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  + +   N    R     +   + +D  I + +  ++   +  + +   +G  Y
Sbjct: 91  IKNNLDPRKWTYSNIEYMRGQLQSMGMMVDWDQQIVSADPEYYRWNQWFFIQFFKRGLAY 150

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           K       C     +L  E    D+   +  D      + +  QW      +F++++Y D
Sbjct: 151 KKFSAVDWCPKCNTTLAREQVVGDERRCERCDSLV--TKRDLDQW------YFKITSYAD 202

Query: 175 KLLSYYE-SHPEFILPIER 192
           +LL++ E   PE I  ++R
Sbjct: 203 ELLNFSELDWPERITTMQR 221



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 39/234 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIY----WPAF----LLSANLPLPKKVFSHGFILHK-GEKIS 304
           K+ P D +  G++    H +Y    W A     L+SAN P+  ++ + G IL +   K+S
Sbjct: 526 KWLPVDQYTGGREHAVMHLLYTRFWWKAMRDMGLVSANEPM-TRLINQGVILGEDSNKMS 584

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVIDP  ++ + G D +R FL+      + G ++  G++  V         +   R
Sbjct: 585 KSRGNVIDPDMLVAQYGADTVRTFLMFIGPWEQGGPWNNRGIEGCVR------FLDRAWR 638

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCS-RVLQEIRENMQNQLIHRALAQVISLVSE 423
            V+   + +D +          D S L   + R+++++ +++Q    + A+A ++  V+E
Sbjct: 639 VVTDTPQRHDAV---------GDASTLERQTHRIIKKVGDDLQRFAFNTAIAGLMEFVNE 689

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +           +K    D   T  +   +    L +LL    P +A ++++ L
Sbjct: 690 L-----------MKVRETDVYGTTTW--RKATETLTLLLAPIAPHIAEELWEFL 730


>gi|58040911|ref|YP_192875.1| valyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81818999|sp|Q5FN28|SYV_GLUOX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58003325|gb|AAW62219.1| Valyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 888

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G+ +  D + ++  W  +     TT G+ D  +   A+++P  + V G DI+     +W 
Sbjct: 453 GVSLTQD-EDVLDTWFSSALWPFTTLGWPDRTE-ELARYYPTSVLVTGFDII----FFWV 506

Query: 277 AFLLSANL----PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L     +P + V  HG +   KG+K+SKS GN +DP++++ E G DA R  + 
Sbjct: 507 ARMMMMGLHFMDDVPFRTVLIHGLVRDEKGQKMSKSKGNGLDPLDLVAEFGADATRLAIC 566

Query: 331 REIACGKD 338
                G+D
Sbjct: 567 AGTGPGRD 574



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GH+   ++ D+L R+ R +G +VL+  GTD           +AG+ T++ V++
Sbjct: 50 HLGHSLNFVLQDMLIRWKRQEGFNVLWQPGTD-----------HAGIATQMVVER 93


>gi|317014979|gb|ADU82415.1| leucyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 806

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNL 361
           GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I   
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAISPT 636

Query: 362 VSR 364
            S+
Sbjct: 637 TSK 639


>gi|256751076|ref|ZP_05491958.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749982|gb|EEU63004.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 816

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 28/233 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K      +A  + N V R
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIKA-----IARFV-NRVER 631

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +   ++  +    T     E ++ +  +    ++ + E+      + A+A+++ LV+ +
Sbjct: 632 FIEKFIEIRNNSSKTKDEMGEEEKELNYIRHYTIKSVTEDADKFQFNTAIARIMELVNAL 691

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +Y              D     +    EV+  L  LL  F P  + ++++ L
Sbjct: 692 YKY------------EADVEVKNIKFYEEVVADLIRLLAPFAPHFSEEMWEKL 732



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGWEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  R+M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYE 122


>gi|219109559|ref|XP_002176534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411069|gb|EEC50997.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1052

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 119/280 (42%), Gaps = 50/280 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++       D         +PAD+++ G D    H  ++ + LL++    N
Sbjct: 598 MDVWFDSGSSWAGVAQSRDE------LAYPADMYLEGSDQ---HRGWFQSSLLTSVANNN 648

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
           +   K V +HGF+L  KG K+SKSLGNV+DP++VIE           G D LR ++    
Sbjct: 649 IAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQDPAYGADVLRLWVANSD 708

Query: 334 ACGKDGFYDKDGLKKRVNA--DLANG----IGNLV----SRSVSMILKDYDGMIPTPGAF 383
             G D     + +K+  ++   L N     IGNL     S S       YD +       
Sbjct: 709 YSG-DVLIGDNIIKQTFDSYRKLRNTARYLIGNLADFVPSDSTDSNAVAYDDL------- 760

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP----WELK 437
              D+ +L   S VL+ + E M +    RA+ +++   S    + Y D  K       + 
Sbjct: 761 PSMDKWMLGRLSAVLRTVNEAMDDFQYQRAIQELLRFASADLSNFYLDVAKDRLYISAMD 820

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   TVLY  +E   +    +   +P +A  I+  L
Sbjct: 821 DARRRSCQTVLYACLEGFTK---AISPILPHMAEDIWQNL 857


>gi|261855975|ref|YP_003263258.1| valyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836444|gb|ACX96211.1| valyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 952

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 57/298 (19%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+  N     A F+P  + V G DI+ F    W A ++      
Sbjct: 474 VLDTWFSSALWPFSTLGWPQNTQ-ELAYFYPTSVLVTGFDIIFF----WVARMVMMGKYF 528

Query: 282 -ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV------------------- 320
             ++P  ++V+ HG I   +G+K+SKS GNV+DPI++I+ +                   
Sbjct: 529 MGDVPF-REVYVHGLIRDAQGQKMSKSKGNVLDPIDLIDGIDLESLVAKRTAGLMQPKMA 587

Query: 321 ------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DA+R+        G+D  +D   ++   N    N + N  
Sbjct: 588 AKIEKDTRKEFADGIPAFGTDAMRFTFAALATTGRDIRFDLGRIEGYRN--FCNKLWN-A 644

Query: 363 SRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           SR V M  +D D G+   P   +++DE I+    +V  E+ ++  +     A   +    
Sbjct: 645 SRFVMMQCEDQDTGLTDAPVTLSDADEWIIGRLQQVEAEVAKHFADYRFDLAAQTLYEFT 704

Query: 422 --SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D Y +  KP  LK  +           V V+  L  LL   +P +   I+  L
Sbjct: 705 WNEYCDWYLEFTKP-ALKADDEAAQRGTRRTLVRVLEALLRLLHPIIPFITETIWQRL 761



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA++  + D+L R HR+ G   L+  GTD           +AG+ T++ V++ 
Sbjct: 51 HMGHAFQDTLMDMLTRVHRMQGERTLWQPGTD-----------HAGIATQMVVERQ 95


>gi|209517543|ref|ZP_03266383.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502076|gb|EEA02092.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 863

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 16/183 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               V    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 91  MANNVPPAQWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            YK   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y D+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPM-------YYMRITQYADE 201

Query: 176 LLS 178
           LL+
Sbjct: 202 LLN 204


>gi|195941556|ref|ZP_03086938.1| valyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|312149539|gb|ADQ29610.1| valyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 875

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L   ++V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTEQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SREKFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|218779617|ref|YP_002430935.1| isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761001|gb|ACL03467.1| Isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 932

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 16/145 (11%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---LTTTGYLDN 247
           E +   + F +S    L    K    G    +    I+ VW D+  ++   L    YL  
Sbjct: 496 EEQGADVWFAESAADLLPEGTKCAKCGSSSFEKETDILDVWFDSGVSHAAVLEARDYLR- 554

Query: 248 PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304
                   WPAD+++ G D  R  FH+    A       P  K V +HGF++  KG K+S
Sbjct: 555 --------WPADMYLEGSDQHRGWFHSSLLSAVGTRGKAPY-KAVLTHGFVVDAKGRKMS 605

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFL 329
           KS+GNVI P +VI+  G + LR ++
Sbjct: 606 KSVGNVIAPGKVIKSHGAEILRLWV 630



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           R +  +     Y N   HIG A   I+ D++ R   + G D ++  G D HG  I     
Sbjct: 47  RTRFILHDGPPYANGNIHIGTALNKILKDIIIRSRNMAGFDAIYVPGWDCHGLPIEHNVD 106

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            +  +     T+V + Q  R + +    +DI   +F R
Sbjct: 107 KELGKKKADMTQVQIRQECRKYAER--FIDIQRGEFKR 142


>gi|126179951|ref|YP_001047916.1| leucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862745|gb|ABN57934.1| leucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 925

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF-----TTGTDEHGQK 57
           E+EK Y++ A  YP+   H+GH    I+ DVLAR+ R+ G +VLF      TGT   G  
Sbjct: 27  EKEKYYLTVAYPYPSGAMHVGHGRTYIVPDVLARYQRMRGKEVLFPMAFHVTGTPVIG-- 84

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           I+K   N   TT          +RD+  V     D FI   E   H
Sbjct: 85  ISKRIANGDTTTIGL-------YRDLYRVPQDILDRFIDPMEIVRH 123


>gi|91789693|ref|YP_550645.1| isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698918|gb|ABE45747.1| Isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 943

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 222 DDPQYI-----MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIY 274
           D P YI     + VW D+ T    T  ++     +    WPADL++ G D  R  FH+  
Sbjct: 539 DAPDYIKSTDILDVWFDSGT----THDHVLRHSHAAQSTWPADLYLEGHDQHRGWFHSSL 594

Query: 275 WPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             A  +  + P  K + +HGF +  KG K+SKS GNV+ P EV +++G + +R +     
Sbjct: 595 LTACAMYDHAPY-KGLLTHGFTVDGKGRKMSKSEGNVVVPQEVSDKLGAEIIRLWCASTD 653

Query: 334 ACGKDGFYDK 343
             G  G  DK
Sbjct: 654 YSGDLGIDDK 663



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 12/129 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
           K  +     Y N + HIGHA   ++ D++ +  +L GLD ++  G D HG  I  A +  
Sbjct: 54  KFVLHDGPPYANGKIHIGHAVNKVLKDMIVKARQLKGLDAIYVPGWDCHGLPIENAIEKL 113

Query: 64  NAGVTTKVFVDQNSRNFR------DMADVLDIS----YDDFIRTTEKRHHDTCRILWKKI 113
           +     +  V   SR F        MAD   +     +D+  RT +  +        K+I
Sbjct: 114 HGRNLPRDEVQAKSRAFATEQIAGQMADFKRLGVLGEWDNPYRTMDHANEANEIRALKRI 173

Query: 114 SDKGDIYKG 122
            ++G +Y+G
Sbjct: 174 MERGFVYRG 182


>gi|50841708|ref|YP_054935.1| isoleucyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81826532|sp|Q6AB89|SYI_PROAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50839310|gb|AAT81977.1| putative isoleucyl-tRNA synthetase [Propionibacterium acnes
           KPA171202]
 gi|313813985|gb|EFS51699.1| isoleucine--tRNA ligase [Propionibacterium acnes HL025PA1]
          Length = 1114

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 54/292 (18%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V    
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVGS-- 737

Query: 371 KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V E+  +
Sbjct: 738 RGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNW 795

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 796 YVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 843


>gi|15612517|ref|NP_224170.1| leucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919983|sp|Q9ZJ63|SYL_HELPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4156066|gb|AAD07021.1| LEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 806

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 576

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA+R F++      K+  ++ + L+      KR+  D AN I  
Sbjct: 577 KGNVVSPKEILKKYGADAVRLFILFAAPPAKELEWNDNALEGAHRFIKRL-YDKANAITP 635

Query: 361 LVSR 364
             S+
Sbjct: 636 TTSK 639


>gi|313607791|gb|EFR83990.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 611

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 20/175 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 143 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 202

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 203 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 256

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++
Sbjct: 257 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWV 310


>gi|167630165|ref|YP_001680664.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592905|gb|ABZ84653.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 936

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 39/274 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++          +  K   +PADL++ G D  R  F++    A       
Sbjct: 531 IMDVWFDSGSSHAAVL------ETHKDLHFPADLYLEGSDQHRGWFNSSLSTAVATKGTA 584

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  K V +HGF++  +G K+SKSLGN ++P +VI+++G D LR ++       ++A   +
Sbjct: 585 PY-KAVLTHGFLVDEQGRKMSKSLGNGVEPQDVIKDMGADILRLWVASVDYRTDVAASPN 643

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                    +++       +GNL           Y+ MI       E D   + +  +++
Sbjct: 644 IMRQTADGYRKIRNTFRYFLGNLYDFDPKADAVAYEDMI-------ELDRWAMMLLHKLI 696

Query: 399 QEIRENMQN---QLIHRALAQVISL-VSEV------DRYFDAQKPWELKKTNPDRASTVL 448
           Q +    +N    L++ A+    ++ +S +      DR + +    + +++    A TVL
Sbjct: 697 QRVTAACRNYEFHLVYHAVHNFCAVDMSAIYLDIIKDRLYASPAKSQARRS----AQTVL 752

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           Y T +    L  +L  F+   A +++  L  A E
Sbjct: 753 YHTADA---LVRMLAPFISFTAEEVWGYLPGAKE 783



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 15/153 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K  +     Y N + H+GH    ++ D + +FH +DG D  +  G D HG  I + A 
Sbjct: 53  KPKFILHDGPPYANGEIHLGHTLNKVLKDFIVKFHSMDGFDAPYVPGWDTHGLPIEQQAI 112

Query: 63  QNAGVTT-KVFVDQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI- 108
           +  G+    V   +  R  ++ A   +D+  + F R            T K   +  +I 
Sbjct: 113 KTLGLNRHAVSTVEFRRRCQEYALKYVDVQREGFKRLGVRGDWENPYITLKPEFEAAQIG 172

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +++ KG IYKG    ++    E    + EV
Sbjct: 173 VFGEMAKKGYIYKGLKPVYWCASCETALAEAEV 205


>gi|116494392|ref|YP_806126.1| leucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191637728|ref|YP_001986894.1| leucyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|122264182|sp|Q03AT8|SYL_LACC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693022|sp|B3WCD5|SYL_LACCB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116104542|gb|ABJ69684.1| leucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712030|emb|CAQ66036.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus casei BL23]
 gi|327381793|gb|AEA53269.1| Leucyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327384954|gb|AEA56428.1| Leucyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 803

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 32/159 (20%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL      +P K     +F+ G IL  
Sbjct: 513 DYDKLKAWMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGA-IPNKEPFQRLFNQGMILGD 571

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG------------- 339
             EK+SKS GNV++P +V++E G D LR +      L   IA    G             
Sbjct: 572 NHEKMSKSKGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGLAGARKFLDRVWS 631

Query: 340 -FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            F D +G L+ R+       +  + + +V  + +DYD +
Sbjct: 632 AFIDDEGKLRDRITTINDGRLDKVYNETVKKVTEDYDAL 670


>gi|89898140|ref|YP_515250.1| valyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722316|sp|Q255D3|SYV_CHLFF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|89331512|dbj|BAE81105.1| valyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 940

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 93/243 (38%), Gaps = 75/243 (30%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  S    I P E     +S+V + L+D  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRDSLREFVASDSIKIFPPEFTRNYLSWVNN-LRDWCISRQLW-WGHRIPVWY 420

Query: 222 ---DDPQYIMY------------------------VWIDALTNYLTTTGYLDNPDGSKAK 254
              D+ + I Y                         W  +    LT  G+ D       K
Sbjct: 421 HKSDEDRIICYDGEGLPEEVAQDPDSWDQDPDVLDTWFSSGLWPLTCLGWPDVEAKDLKK 480

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHKG----------- 300
           F+P  + + G DIL F  +     L SA +   P    VF HG I  K            
Sbjct: 481 FYPTSVLITGHDIL-FFWVTRMVLLCSAMVGEKPF-SDVFLHGLIFGKSYKRYNNLGEWT 538

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS GNVIDP+E+I++ G DA+R  L    +C 
Sbjct: 539 YISGEEKHAYDMGKPLPKDVTAKWEKLSKSKGNVIDPLEMIDKYGADAVRMALC---SCA 595

Query: 337 KDG 339
             G
Sbjct: 596 NRG 598



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 24/164 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT--KVFVDQNSR 78
           H+GHA    + DVL R+ R+ G +V +  GTD  G       +    ++  K  +D +  
Sbjct: 54  HMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTVVERHLYSSLGKRRIDFSRE 113

Query: 79  NF-------------------RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            F                   R +    D S   F  T E       +  +K + D+G I
Sbjct: 114 EFLEYVWEWKEKSEGIILSQLRQLGCSCDWSRLRF--TMEPLASRAVKKAFKVLFDRGHI 171

Query: 120 YKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           Y+G Y   W  +   A  +D+  Y+  DG  Y  ++  V   +E
Sbjct: 172 YRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRVVDSSDE 215


>gi|148549871|ref|YP_001269973.1| leucyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148513929|gb|ABQ80789.1| leucyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 906

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 70  KDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAM 129

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 130 KNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYR 189

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+FR++ Y D+LL 
Sbjct: 190 KNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFRITDYADELLE 242

Query: 179 YYESHP 184
             +  P
Sbjct: 243 SLDELP 248


>gi|315452862|ref|YP_004073132.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131914|emb|CBY82542.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 864

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 12/91 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P  + + G DIL F    W A +L +       LP  K ++ H  +    GEK+SKS 
Sbjct: 479 FYPNSVLITGFDILFF----WVARMLLSGESLLGALPF-KHIYLHALVRDENGEKMSKSK 533

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP+E+I+  G DALR+ L      G+D
Sbjct: 534 GNVIDPLELIKTYGSDALRFALAMLCVQGRD 564



 Score = 40.0 bits (92), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA  + + D+L RF R+DG  VL+  G D  G
Sbjct: 49 HMGHALTLSLQDILVRFKRMDGYRVLYQPGLDHAG 83


>gi|298293749|ref|YP_003695688.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930260|gb|ADH91069.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 870

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH    ++ DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHGRNYVMGDVVARFKRMKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 + +  +N    R+   +L +S D    I T +  ++   + ++ +    G +Y+
Sbjct: 93  ERKSHPREWTYENIATMREQLKLLGLSLDWSREIATCDPSYYGEQQRIFLEFLKGGFVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D     +++V    DG+ + +    V+  +   +FFR++A   +LL
Sbjct: 153 RESEVNWDPVDNTVLANEQVI---DGRGWRSGAL-VERRKLAQWFFRITALAQELL 204


>gi|227358523|ref|ZP_03842848.1| leucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227161234|gb|EEI46308.1| leucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 860

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYENINYMKGQLKKLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +     PV+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 208 TLDEWPEQVKTMQR 221


>gi|171778693|ref|ZP_02919789.1| hypothetical protein STRINF_00641 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282650|gb|EDT48074.1| hypothetical protein STRINF_00641 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 932

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +G +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNAREGLE---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF+L  KGEK+SKS GN+I P +V ++ G + LR ++
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWV 622



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFCAPYVPGWDTHGLPIEQVLAKKGVKRKEIPL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++           R+    ++DKG 
Sbjct: 118 TEYLEMCREYALSQVDKQREDFKRLGVSADWE-NPYVTLIPAYEAAQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|166154419|ref|YP_001654537.1| leucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155294|ref|YP_001653549.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335678|ref|ZP_07223922.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687406|sp|B0B9V9|SYL_CHLT2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687463|sp|B0BBI9|SYL_CHLTB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|165930407|emb|CAP03900.1| leucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931282|emb|CAP06854.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 819

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR  R  G  VL   G D  G    + A
Sbjct: 30  KTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARCKRAQGFSVLHPMGWDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   ++N  NF+     +  SYD+     T++  ++   + L+  + +KG  Y
Sbjct: 90  IRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
               +  Y        +++E+  G   DG Y   +    QW+       R++A+ D+LL
Sbjct: 150 MADMAVNYCPELGTVLSNEEIENGFSVDGGYPVERRMLRQWV------LRITAFADQLL 202


>gi|325860132|ref|ZP_08173258.1| valine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482417|gb|EGC85424.1| valine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 897

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 29/263 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           M  W  +    ++    +++PD  + + ++P    V G DI+ F    W A ++ A    
Sbjct: 476 MDTWFSSWLWPISVFDGINHPDNEEISYYYPTSDLVTGPDIIFF----WVARMIMAGYEY 531

Query: 284 ---LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     G D 
Sbjct: 532 RGKFPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDI 590

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N        N +  +  ++          P A   + E   +    V  
Sbjct: 591 LFDETLCEQGRN------FNNKIWNAFRLVQGWQTADTEQPQASRIAVEWFDAKLKAVNA 644

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----I 455
           E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  VT E      
Sbjct: 645 EMDEQFRSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDTVTYEATLRFF 698

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  +L  F+P +  +++  L+
Sbjct: 699 NALLKMLHPFMPFITEELWQHLY 721


>gi|319937141|ref|ZP_08011548.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807507|gb|EFW04100.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 910

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++   TG +      +   +P DL+  G D  R  F++            
Sbjct: 523 IMDVWFDSGSSH---TGVMK----ERGYPYPVDLYFEGSDQYRGWFNSSLIIGTAAHGCA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K V SHGF+L  KG K+SKSLGN +DPI+++ + G D LR
Sbjct: 576 PY-KTVLSHGFVLDGKGNKMSKSLGNTVDPIKMVNQYGADILR 617



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 28/64 (43%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGH    +I DV+ R+  ++G    F  G D HG  I  A Q  GV  K    
Sbjct: 58  YANGNMHIGHMMNKVIKDVICRYKNMEGFYTPFIPGWDTHGLPIENAIQKLGVNRKAMTT 117

Query: 75  QNSR 78
              R
Sbjct: 118 AEFR 121


>gi|307267109|ref|ZP_07548620.1| leucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917862|gb|EFN48125.1| leucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 816

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 42/240 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K              +SR
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIK-------------AISR 624

Query: 365 SVSMILKDYDGMIPT---PGAFTES---DESILS-VCSRVLQEIRENMQNQLIHRALAQV 417
            ++ + +  D  I T   PG   +    DE+ L+ V    ++ + E+ +    + A+A++
Sbjct: 625 FINRVERFIDKFIETRNNPGKTKDEMGKDENELNYVRHYAIKGVTEDAERFQFNTAIARI 684

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ + +Y          +T+ +  +   Y   EV+  L  LL  F P  + ++++ L
Sbjct: 685 MELVNALYKY----------ETDVEVKNIKFY--EEVVTDLIRLLAPFAPHFSEEMWEKL 732



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  R+M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYE 122


>gi|302039506|ref|YP_003799828.1| leucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607570|emb|CBK43903.1| Leucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 811

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 23/189 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFILHK- 299
           D +K ++W P DL++ G +    H +Y   W   L  A +   P P KK+   G +L + 
Sbjct: 523 DPAKERYWMPVDLYIGGSEHAVLHLLYSRFWHKVLFDAGVVSTPEPFKKLVHQGIVLGED 582

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNV++P E+I++ G DA+R +         + F       K  +     GI 
Sbjct: 583 NQKMSKSRGNVVNPDEMIDQFGADAVRLY---------EMFMGPLESMKPWSTRGVEGIT 633

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
             + R   +++ D   + P   A T+++ S   L +    ++++ +++     + A++Q+
Sbjct: 634 RFLDRVWRLLIGDEGALSP---AVTDAEPSPEQLRLLHYTIKKVTDDIDALRFNTAISQM 690

Query: 418 ISLVSEVDR 426
           +   +E+ +
Sbjct: 691 MVFTNEMTK 699


>gi|296225004|ref|XP_002758315.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 902

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI-- 358
           EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D       V  D   G+  
Sbjct: 637 EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-------VKTDALPGVLR 689

Query: 359 --GNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--------SVCSRVLQEIRENMQNQ 408
               L + +   I     G  P P   +  +++          SV S+V     E+    
Sbjct: 690 WQQRLWALTTRFIEARASGKAPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFS-- 747

Query: 409 LIHRALAQVISLVSEVDR 426
            ++ A++Q++ L S + +
Sbjct: 748 -LNSAISQLMGLSSTLSQ 764


>gi|197284333|ref|YP_002150205.1| leucyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693169|sp|B4EV14|SYL_PROMH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194681820|emb|CAR41076.1| leucyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 860

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYENINYMKGQLKKLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +     PV+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 208 TLDEWPEQVKTMQR 221


>gi|13471197|ref|NP_102766.1| valyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|75543677|sp|Q98LB1|SYV_RHILO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14021941|dbj|BAB48552.1| valyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 927

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     K  ++  D+ V G DI+ F    W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDQTPELKT-YYQTDVLVTGFDIIFF----WVARMMMMGLHF 549

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V+ H  +  K G K+SKS GNVIDP+++I+E G DALR+ L    A G+D
Sbjct: 550 MDEEPFHTVYVHALVRDKNGAKMSKSKGNVIDPLDLIDEYGADALRFTLTVMAAQGRD 607


>gi|88860574|ref|ZP_01135212.1| leucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817772|gb|EAR27589.1| leucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 862

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    R     L   Y  D  I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNHTAPAKWTYENIDYMRTQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL-- 176
              +  +   D+    +++V  G     G     +  P QW      F +++ Y  +L  
Sbjct: 152 KMSTVNWDPVDQTVLANEQVIDGRGWRSGALVEQKEIP-QW------FIKITDYAQELLD 204

Query: 177 -LSYYESHPEFILPIER 192
            L   E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|319779340|ref|YP_004130253.1| Leucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109364|gb|ADU92110.1| Leucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 896

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G      A
Sbjct: 49  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGM----PA 104

Query: 63  QNAGVTTKV--------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
           +NA + +KV         +D   +  + M   +D S +      +  ++   + ++ K+ 
Sbjct: 105 ENAAIKSKVPPAEWTYANIDYMKKQLQAMGFAIDWSRE--FAACDPEYYKWNQWMFLKML 162

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           +KG  Y+   +  +   D+    +++V    DG+ + +    ++  E  GY+ +++ Y  
Sbjct: 163 EKGIAYRKTQTVNWDPVDQTVLANEQV---VDGRGWRS-GALIEKREIPGYYLKITDYAQ 218

Query: 175 KLLSYYESHPE 185
           +LL Y ++  E
Sbjct: 219 ELLDYVQNGLE 229


>gi|260591962|ref|ZP_05857420.1| leucine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536246|gb|EEX18863.1| leucine--tRNA ligase [Prevotella veroralis F0319]
          Length = 970

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  KNKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +V   +N   +R+  D +  S+D
Sbjct: 88  YAIQTGQHPEVTTKKNIARYREQLDKIGFSFD 119


>gi|225444321|ref|XP_002264138.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302144097|emb|CBI23202.3| unnamed protein product [Vitis vinifera]
          Length = 971

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D+LARF R+ G +VL   G D  G    + A
Sbjct: 112 KPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYA 171

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+   +N   FR     L  SYD    I T E  ++   + ++ ++  +G  Y
Sbjct: 172 IETGTHPKITTTRNIARFRSQLKSLGFSYDWEREISTIEPEYYKWTQWIFLQLLKRGLAY 231

Query: 121 KG 122
           + 
Sbjct: 232 QA 233


>gi|312795297|ref|YP_004028219.1| isoleucyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167072|emb|CBW74075.1| Isoleucyl-tRNA synthetase (EC 6.1.1.5) [Burkholderia rhizoxinica
           HKI 454]
          Length = 945

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 14/128 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           M VW D+ T +           GS A+   WPADL++ G D  R  FH+      +L   
Sbjct: 550 MDVWFDSGTTHWHVL------RGSHAQQLQWPADLYLEGSDQHRGWFHSSLLTGSMLDGR 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K + +HGF +  +G K+SKS+GNVI P EV  ++G + +R ++      G+    D
Sbjct: 604 PPY-KALLTHGFTVDGQGRKMSKSVGNVIAPQEVSNKLGAEIIRLWVASTDYSGELSISD 662

Query: 343 KDGLKKRV 350
           +  + KRV
Sbjct: 663 E--ILKRV 668



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           + R K  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I  +
Sbjct: 54  RGRPKFVLHDGPPYANGDIHIGHAVNKILKDMIVKARNMAGFDADYVPGWDCHGMPIEIQ 113

Query: 61  AAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIR 96
             +  G +  V  V +N+R +   A+ ++    DF R
Sbjct: 114 IEKRFGKSLPVELVQRNAREY--AAEQIERQKADFRR 148


>gi|288904820|ref|YP_003430042.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731546|emb|CBI13101.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 932

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +G +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNAREGLE---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEIPL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I    +      R+    ++DKG 
Sbjct: 118 TEYLEMCREYALSQVDKQREDFKRLGVSADWE-NPYITLIPEYEAAQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|210633886|ref|ZP_03297901.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
 gi|210159055|gb|EEA90026.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
          Length = 933

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 19/119 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---AN 283
           I+ VW D+  ++     Y D         +PAD+++ G D    H  ++ + LL+   AN
Sbjct: 544 ILDVWWDSGVSWKAVCEYRDE------LHYPADVYLEGSDQ---HRGWFQSSLLTSVGAN 594

Query: 284 LPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIAC 335
              P K V S GF L  +G K+SKSLGNVIDP +V +E+G D +R ++       ++AC
Sbjct: 595 GVAPYKAVISQGFTLDGQGRKMSKSLGNVIDPNKVCDEMGADIVRLWVASIDTSTDVAC 653



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   H+GHA   I  D++ R+  + G +  +  G D HGQ I    + 
Sbjct: 50  KKFVLHDGPPYANGPIHLGHAMNKISKDIINRYKAMQGFETPYVPGWDCHGQPIEHKVEE 109

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI 108
             + T+ F +      R++ +   +   D  R   KR                 HD   I
Sbjct: 110 K-LGTEKFNNTPVAKIRELCNEFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADI 168

Query: 109 -LWKKISDKGDIYKG 122
            ++K + DKG +Y+G
Sbjct: 169 EVFKAMFDKGMVYRG 183


>gi|328861423|gb|EGG10526.1| hypothetical protein MELLADRAFT_33688 [Melampsora larici-populina
           98AG31]
          Length = 1102

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 15/257 (5%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILHKG 300
            +N +  ++ F PA     G D  R    ++   +LS +L    P    V     +   G
Sbjct: 561 FENKETFESAF-PAQFIAEGMDQTR--GWFYTLLVLSTHLFQKAPWQNLVVCGLVLAEDG 617

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIG 359
           +K+SKSL N  +P  +I + G D LR FL+   +  G++  + + G+K+ V   +   + 
Sbjct: 618 KKMSKSLKNYPNPDLIINQHGADPLRLFLINSPVVRGENLRFRETGVKEVVGRVMLPWLN 677

Query: 360 N--LVSRSVSMILK--DYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRA 413
           +       VS++ K    D +       +E+  D  +L+ C  +++ +R  M+   ++  
Sbjct: 678 SYRFFLGQVSLLKKVSKIDFVYDHQAKLSENVMDRWVLARCQALIKSVRTEMEAYRLYTV 737

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + Q++ LV E+  ++       LK  N  + A   L    E +  L   L +F P L   
Sbjct: 738 VPQMLDLVDELTNWYIRFNRRRLKGENGAEDAVVALNTLFETLFTLCRTLSSFTPFLTEN 797

Query: 473 IFDILFVADENRCFQSL 489
           I+  L     N   QSL
Sbjct: 798 IYQGLRRFFPNEMIQSL 814


>gi|327314648|ref|YP_004330085.1| valine--tRNA ligase [Prevotella denticola F0289]
 gi|326945879|gb|AEA21764.1| valine--tRNA ligase [Prevotella denticola F0289]
          Length = 897

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 29/263 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           M  W  +    ++    +++PD  + + ++P    V G DI+ F    W A ++ A    
Sbjct: 476 MDTWFSSWLWPISVFDGINHPDNEEISYYYPTSDLVTGPDIIFF----WVARMIMAGYEY 531

Query: 284 ---LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     G D 
Sbjct: 532 RGKFPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDI 590

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N        N +  +  ++          P A   + E   +    V  
Sbjct: 591 LFDETLCEQGRN------FNNKIWNAFRLVQGWQTADTEQPQASRIAVEWFDAKLKAVNA 644

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----I 455
           E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  VT E      
Sbjct: 645 EMDEQFRSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDTVTYEATLRFF 698

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  +L  F+P +  +++  L+
Sbjct: 699 NALLKMLHPFMPFITEELWQHLY 721


>gi|304388442|ref|ZP_07370548.1| leucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337559|gb|EFM03722.1| leucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 912

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|237743224|ref|ZP_04573705.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433520|gb|EEO43732.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 712

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G +    PA
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLRR---PA 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGRKMSKSLGNTVSPAD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  +KA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVSKAREMSALEIRKLCEKYARKW------VGIQKEQFIRLGVLGDWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I + G I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203


>gi|149912581|ref|ZP_01901115.1| isoleucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149812987|gb|EDM72813.1| isoleucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 968

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DGS+     ADL++ G D  R  FH+    A       
Sbjct: 575 ILDVWFDSGSTHAFV--LRDREDGSEDGL--ADLYLEGTDQHRGWFHSSMLQACGTIGRA 630

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKSLGN + P EV+++ G D LR ++ +
Sbjct: 631 PY-RGVLTHGFTLDEKGNKMSKSLGNTVAPEEVVKQYGADILRLWVAQ 677



 Score = 37.0 bits (84), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 63  YANGHLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPI 106


>gi|76800878|ref|YP_325886.1| leucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556743|emb|CAI48317.1| leucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 880

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 19/196 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ Q H+GH     I D  AR+ R+DG DVL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGQLHMGHVRNYTITDAYARYRRMDGDDVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKK-----ISDKGDI- 119
             + +        RD  + +   YD    + T E  ++   + L+++     ++++ D  
Sbjct: 96  NPRDWTVDCIDTMRDQMESMGFGYDWEREVTTCESDYYQWNQWLFRRFVEEDLAERRDAE 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL--- 176
              C      L DE    DDE+    D         PV   E E +F +++ Y D+L   
Sbjct: 156 VNWCPDCETVLADEQVEGDDELCWRCD--------TPVVTRELEQWFLKITDYADELVDD 207

Query: 177 LSYYESHPEFILPIER 192
           +   E  P+ +  ++R
Sbjct: 208 IDELEGWPDSVRQMQR 223



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 37/61 (60%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +  +GEK+SKS GNV+ P  +++E G D  R F+++     +D  + ++G++
Sbjct: 552 ENLLAQGMVQLEGEKMSKSKGNVVSPQAIVDEYGADTARLFMMQAAQPERDFDWTEEGVR 611

Query: 348 K 348
            
Sbjct: 612 S 612


>gi|332183966|gb|AEE26220.1| Leucyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 813

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 14/182 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     A
Sbjct: 29  KNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A     +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  
Sbjct: 89  AIKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEGYYKWEQWFFIQLYKKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y K     W  + D+    +++V  G     G     +  P QW      F +++ Y D+
Sbjct: 149 YRKNSVVNWDPV-DQTVLANEQVIDGRGWRSGALVEKKEIP-QW------FLKITDYADE 200

Query: 176 LL 177
           LL
Sbjct: 201 LL 202



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN +DP E+I++ G D +R F
Sbjct: 576 MSKSKGNTVDPQELIDKYGADTVRLF 601


>gi|317489666|ref|ZP_07948170.1| leucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316911260|gb|EFV32865.1| leucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 859

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 35/249 (14%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK-GE 301
           KA  W P D ++ G +    H +Y   +        LL  + P    +   G +  + GE
Sbjct: 548 KANRWMPVDQYIGGIEHAILHLLYSRFYTKVLRDLGLLEFDEPF-SNLLCQGMVKDEHGE 606

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            +SKS GNVI P ++I E G DA+R +++      KD  +D+ GL          GI   
Sbjct: 607 TMSKSKGNVIAPEDMIAEYGADAVRAYILFMAPPDKDLLWDEGGLA---------GIYKF 657

Query: 362 VSRSVSMILKDYDG-----MIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHR 412
           ++R+   I+ D  G      +  PGA  +      E ++    RV+ ++ ++      + 
Sbjct: 658 MNRAWR-IVNDLMGAADEETLFQPGASEDEGIKALEQLVRERHRVVGKVVDDFDRNNFNT 716

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           ALA ++ L +    Y   + P +       RA     V  +V   L  LL  F P  A +
Sbjct: 717 ALAAIMELTNAASDYLRKRSPEQRAACEESRA-----VDADVAEVLVKLLAPFAPHWAEE 771

Query: 473 IFDILFVAD 481
           ++  +   D
Sbjct: 772 LWHAVLGKD 780



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GH     I DV+AR++++ G DVL   G D  G     AA 
Sbjct: 33  KPKKYVLEMFPYPSGDIHMGHVRNYTIGDVVARYYKMRGFDVLHPMGWDAFGLPAENAAI 92

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    T   +D    +F+ M      SYD
Sbjct: 93  KRNSHPAKWTYANIDTQKASFKRMG----FSYD 121


>gi|304403904|ref|ZP_07385566.1| leucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304346882|gb|EFM12714.1| leucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 815

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 39/235 (16%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILH-KGEK 302
           K K W P DL++ G +    H +Y   W   L    +   K+ F    + G IL    EK
Sbjct: 527 KQKEWLPVDLYIGGAEHAVLHLLYARFWHKVLYDIGVVDTKEPFHKLVNQGMILGTNNEK 586

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVI+P E++ E G D LR +         + F       K  NA+   G    +
Sbjct: 587 MSKSRGNVINPDEIVNEFGGDTLRMY---------EMFMGPLEATKPWNANGVEGTYRFL 637

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR   + + D DG +       +  E+      R ++++ ++ +N   + A++Q++  V+
Sbjct: 638 SRVWRLFIGD-DGALNAKVTDGDGSEAFKRTWHRTIKKVTDDFENLRFNTAISQLMIFVN 696

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 DA K  EL +              + +     +L    P +A ++++ L
Sbjct: 697 ------DAYKAEELPR--------------KAMENFVQMLSPLAPHIAEELWEKL 731



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 40  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGFNVLHPMGWDAFGLPAEQHA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   +    +N  NFR     L  SY  D    TT+  ++   + ++ ++ +KG  Y
Sbjct: 100 LDTGEHPREITVKNINNFRRQIKSLGFSYDWDREFSTTDPDYYKWTQWIFIQLYNKGLAY 159


>gi|282859464|ref|ZP_06268569.1| valine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587692|gb|EFB92892.1| valine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 898

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 29/246 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NPD  +  ++ P    V G DI+ F    W A ++ A        P  K V+  G + 
Sbjct: 493 VNNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKFPF-KHVYFTGIVR 547

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D+   ++  N     
Sbjct: 548 DKQGRKMSKSLGNSPDPLELIEKFGADGVRMGMMLAAPAGNDILFDEALCEQGRN----- 602

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              N +  +  ++       +  P    E+ +  +S     L+ +   MQ Q     +++
Sbjct: 603 -FNNKIWNAFRLVQGWETADLEQP----EASKIAVSWFDAKLKAVNVEMQQQFKDYRISE 657

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANK 472
            +  V ++  ++D    W L+   P+    +   T E        L  +L  F+P +  +
Sbjct: 658 ALMTVYKL--FWDEFSSWYLEMIKPEYGKPIDKATYEATLAFFDNLLKMLHPFMPFITEE 715

Query: 473 IFDILF 478
           ++  L+
Sbjct: 716 LWQHLY 721


>gi|171778891|ref|ZP_02919953.1| hypothetical protein STRINF_00814 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282537|gb|EDT47961.1| hypothetical protein STRINF_00814 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 833

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 12/179 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAKNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|218779046|ref|YP_002430364.1| leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226695253|sp|B8F9F0|SYL_DESAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218760430|gb|ACL02896.1| Leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 863

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 30/195 (15%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK ++     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYFLMEMFPYPSGKIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N          +  SY  D  I T +  ++   + L+ ++  KG +Y+
Sbjct: 92  KNNTHPAKWTYENIAAMGAQLKAMGFSYDWDREIATCKPDYYRWEQWLFVQMFKKGMVYR 151

Query: 122 G------CYSGWYSLRDE------AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  C++    L +E       +   DEV           Q    QW      FFR+
Sbjct: 152 KEASVNWCHTCQTVLANEQVEQNMCWRCGDEV----------EQKKLKQW------FFRI 195

Query: 170 SAYQDKLLSYYESHP 184
           + Y D LL + +  P
Sbjct: 196 TDYADDLLEHCDKLP 210


>gi|57505384|ref|ZP_00371312.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016209|gb|EAL52995.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 870

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 56/248 (22%)

Query: 204 LKDLSLSRKTFDWGIKIP-------------DDPQY--------------IMYVWIDALT 236
           L+D  +SR+ + WG +IP             D P+               ++  W  +  
Sbjct: 393 LRDWCISRQLW-WGHQIPVYYCECGCEWASEDTPKSCPKCGSTNFHQDPDVLDTWFSSGL 451

Query: 237 NYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPAFLL----SAN 283
             ++T G+  N D  K +FW         P  L + G DIL F    W A ++    +A 
Sbjct: 452 WAMSTLGW-GNKDWGKDQFWFEKDLREFYPNSLLITGFDILFF----WVARMMFQSTNAL 506

Query: 284 LPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             LP K ++ H  +   +G K+SKSLGNVIDP E I+    D LR+ L      G+D   
Sbjct: 507 EELPFKHIYLHALVKDEQGRKMSKSLGNVIDPNESIKTYSADILRFTLALLAVQGRDIKL 566

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVLQ 399
            +D L +  N        N +  + + +L + +          +S+ +  I +     L+
Sbjct: 567 SEDKLLQVRN------FTNKIYNATNYLLLNENKFEDLENITIQSELAKFIDAKFQECLK 620

Query: 400 EIRENMQN 407
           ++REN++N
Sbjct: 621 QVRENLEN 628



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG   L+  G D  G
Sbjct: 49 HIGHALTFTLQDIITRYKRMDGYKTLYQPGLDHAG 83


>gi|332040928|gb|EGI77298.1| leucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 903

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 6/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+LAR  R+ G +VL   G D  G     A
Sbjct: 36  QPKPKFYACSMLPYPSGKLHMGHVRNYTINDMLARSLRMKGHNVLMPMGWDAFGLPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    +     + ++ D    + T +  ++   + L+ K+ +KG  
Sbjct: 96  ALKNGVPPAKWTYENIAYMKGQMQAMGLAIDWSREVATCDPTYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y ++LL +
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLKITDYAEELLDH 211

Query: 180 YE 181
            +
Sbjct: 212 VQ 213


>gi|315638950|ref|ZP_07894121.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480979|gb|EFU71612.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 870

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 56/248 (22%)

Query: 204 LKDLSLSRKTFDWGIKIP-------------DDPQY--------------IMYVWIDALT 236
           L+D  +SR+ + WG +IP             D P+               ++  W  +  
Sbjct: 393 LRDWCISRQLW-WGHQIPVYYCECGCEWASEDTPKSCPKCGSTNFHQDPDVLDTWFSSGL 451

Query: 237 NYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPAFLL----SAN 283
             ++T G+  N D  K +FW         P  L + G DIL F    W A ++    +A 
Sbjct: 452 WAMSTLGW-GNKDWGKDQFWFEKDLREFYPNSLLITGFDILFF----WVARMMFQSTNAL 506

Query: 284 LPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             LP K ++ H  +   +G K+SKSLGNVIDP E I+    D LR+ L      G+D   
Sbjct: 507 EELPFKHIYLHALVKDEQGRKMSKSLGNVIDPNESIKTYSADILRFTLALLAVQGRDIKL 566

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVLQ 399
            +D L +  N        N +  + + +L + +          +S+ +  I +     L+
Sbjct: 567 SEDKLLQVRN------FTNKIYNATNYLLLNENKFEDLENITIQSELAKFIDAKFQECLK 620

Query: 400 EIRENMQN 407
           ++REN++N
Sbjct: 621 QVRENLEN 628



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG   L+  G D  G
Sbjct: 49 HIGHALTFTLQDIITRYKRMDGYKTLYQPGLDHAG 83


>gi|293363940|ref|ZP_06610676.1| isoleucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552430|gb|EFF41204.1| isoleucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 890

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 11/103 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +    T+  +DN +G +A   P D+++ G D  R  F++    +       
Sbjct: 518 IMDVWFDSGS----TSIAIDNIEGVEA---PFDVYLEGIDQYRGWFNSSVINSVAYRGKA 570

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K + SHGF+L  KGEK+SKS GN+I P++++++ G D LR
Sbjct: 571 PY-KTLISHGFVLDGKGEKMSKSKGNIISPLDIVKKNGADILR 612



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKIAKAAQNAGVTT 69
           Y N   H+GHA   I+ D++ R+  L G    F  G D HG     + + +A  N    T
Sbjct: 58  YANGDLHVGHALNKILKDIIVRYKTLRGFYSPFVPGWDTHGLPIEHRMLTEAKINKDELT 117

Query: 70  KVF------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            +             ++   + F+ +  + D  +++   T +K+       L+KK++  G
Sbjct: 118 PIILRKKAAKYAYKQIENQKKQFKTLQMLSD--FENIYITMDKKFEANQLKLFKKMTLDG 175

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            +YKG    ++S   ++   + EV
Sbjct: 176 LVYKGLKPVYWSPSSQSALAEAEV 199


>gi|227498613|ref|ZP_03928757.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904069|gb|EEH89987.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 830

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 8/175 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMRGYNVLHPMGFDSFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG-DIY 120
              +    +  +N  N  D    + +SY  D  ++T  + ++   +  ++ +  +G  + 
Sbjct: 93  KHNIPPAKWTLENIANMEDQQKRMGLSYDWDREVKTCMEDYYKWTQWFFELMYKRGLAVK 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           K     W    +    N+  +    DG+ +     PV   +   +FF+++ Y D+
Sbjct: 153 KTAPVNWCEKCNTVLANEQVI----DGKCWRCD-TPVVKKDLSQWFFKITDYADE 202



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 30/205 (14%)

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------ 330
           A L+  + P    + + G ++  G K+SKSLGNV+ P E+I + G D  R F++      
Sbjct: 560 AGLVKVDEPF-TNLLTQGMVIKDGAKMSKSLGNVVSPEEIIGKYGADTARLFIMFAAPVE 618

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           RE+     G         RV   + +    L  +  +  +K+ D          E+   +
Sbjct: 619 RELEWSDQGVEGSFRFLNRVWRIVYHFQDELQKKVKTYDVKELD----------EAGREM 668

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
             +    L++I E++ ++   + A++ ++ LV+ +  Y D     + KK +P        
Sbjct: 669 RHILHVSLKKITEDLDSRFNFNTAISTMMELVNALYAYKD-----KAKKVHPG------- 716

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           +  EVI  L +++  FVP +  +++
Sbjct: 717 LIWEVITDLLLVMAPFVPHITEELW 741


>gi|261856331|ref|YP_003263614.1| leucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836800|gb|ACX96567.1| leucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 818

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 33  REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGLPAENAAL 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     +  +N    R     L ++YD    + T    ++   + L+ ++  KG  YK
Sbjct: 93  KNGDAPARWTFENIDYMRGQLQRLGLAYDWQRELATCTPEYYRWEQWLFTRLVRKGMAYK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D     +++V    DG+ + +    V+  E   +F +++ Y D+L+
Sbjct: 153 KTAVVNWDPVDMTVLANEQVI---DGRGWRS-GALVERREIPQWFIKITNYADELI 204



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 14/98 (14%)

Query: 243 GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-KKVFS 292
           G LD+    +A +W P D +V G +    H +Y   F        L++ + P P  ++ +
Sbjct: 511 GMLDD----RADYWLPVDQYVGGVEHAVLHLLYARFFHKLMRDEGLIAKDKPEPFTRLLT 566

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            G +   G K+SKS GN +DP  +IEE G D +R F++
Sbjct: 567 QGMVNKDGSKMSKSKGNTVDPQPLIEEYGADTVRLFMM 604


>gi|254477127|ref|ZP_05090513.1| isoleucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031370|gb|EEB72205.1| isoleucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 976

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 17/161 (10%)

Query: 182 SHPEFILPIERRNE--VISFVKSGLKDL---SLSRKTFDWGIKIPDDPQYI---MYVWID 233
           + PEF+L  E  N+  V +F + G           K  D GI  PDD   +   + VW D
Sbjct: 531 TDPEFLLRNEELNKRIVAAFEEHGADVWYTDGFKEKMLD-GIVNPDDYDQVFDVLDVWFD 589

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVF 291
           + + +       D  DG++     AD+++ G D  R  FH+    A       P  + V 
Sbjct: 590 SGSTHAFV--LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSLLQACGTKGRAPY-RNVV 644

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +HGF L  KG K+SKSLGN I P +++++ G D LR ++ +
Sbjct: 645 THGFTLDEKGNKMSKSLGNTIVPEKIVQQYGADILRLWVAQ 685



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 10/102 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           ER+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I    
Sbjct: 61  ERKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMLGFDARYVPGWDCHGLPIEWKI 120

Query: 60  -----KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                K  +N      V   Q  R F D  + + I  ++F R
Sbjct: 121 EEQYRKKGKNKDEVPVVDFRQECRAFAD--EWVGIQREEFKR 160


>gi|85713129|ref|ZP_01044162.1| Valyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693045|gb|EAQ31010.1| Valyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 949

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 63/317 (19%)

Query: 211 RKTFDWG-IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           RK  D G IK+  D   ++  W  +     +T G+ +  D  K  F P D+ V G DI+ 
Sbjct: 455 RKENDLGDIKLSQDDD-VLDTWFSSALWTFSTLGWPEQTDDLKT-FHPTDVLVTGFDIIF 512

Query: 270 FHAIYWPAFLLSANL----------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           F    W A ++   +           +P KKV+  G I   +G+K+SKS GNV+DP+++I
Sbjct: 513 F----WVARMIMMTMHFLKDENGQPQVPFKKVYVTGLIRDEEGQKMSKSKGNVLDPLDMI 568

Query: 318 EEV-------------------------------------GVDALRYFLVREIACGKDGF 340
           + +                                     G DALR+ L    + G+D  
Sbjct: 569 DGISADALVEKRTANLMQPKMREKIAKATRKQFPEGIAAHGTDALRFTLTALASTGRDIN 628

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +D   L+   N    N + N  SR V M  +++D G        + +DE I++  +  ++
Sbjct: 629 WDMKRLEGYRN--FCNKLWN-ASRYVLMNTEEHDCGQSGEDYRLSLADEWIIARFNHTVK 685

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E R  +      +A A           D Y +  KP     T  ++  T     V V+ Q
Sbjct: 686 EFRHALDTYRFDQAAAIAYEFTWNQFCDWYLELTKPVLNNGTEAEQRGT-RRTLVTVLEQ 744

Query: 458 LAILLQAFVPKLANKIF 474
           L  LL   +P +   I+
Sbjct: 745 LLRLLHPVLPYITETIW 761



 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 24/135 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKI 58
           S  I  PN     H+GHA++  I D+L R+ R+DG + L+  G+D  G         Q  
Sbjct: 34  SIMIPPPNVTGSLHMGHAFQHTIMDILTRYQRMDGKNTLWQVGSDHAGIATQMVVERQLA 93

Query: 59  AKAAQNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           A+    A +  + F+D+            +   R + D +D   + F  T ++       
Sbjct: 94  AEGKSRADLGREAFIDKVWEWKQESGGTITSQMRRLGDSVDWDRERF--TMDEGLSKAVL 151

Query: 108 ILWKKISDKGDIYKG 122
            ++ K+  +G IY+G
Sbjct: 152 EVFVKLHKEGLIYRG 166


>gi|319784275|ref|YP_004143751.1| isoleucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170163|gb|ADV13701.1| isoleucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 987

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 585 ILDVWFDSGSTHAFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 638

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G K+SKSLGN + P +VI++ G D LR ++V
Sbjct: 639 PY-DTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVV 684



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  RTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSNYVPGWDCHGLPI 108


>gi|255025946|ref|ZP_05297932.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 921

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              GV  K   + +   FR +     +   D  RT  KR
Sbjct: 106 AKKGVKRK---EMSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|289581414|ref|YP_003479880.1| isoleucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530967|gb|ADD05318.1| isoleucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 1070

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 29/298 (9%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           + +   K  + DL+++     +  ++PD    +  VW+D+      T  Y  + D     
Sbjct: 502 DTVDLHKDTVDDLTITEDGTTY-TRVPD----VFDVWLDSSVASWGTLNYPSD-DSQFDD 555

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS----ANLPLPKKVFSHGF-ILHKGEKISKSLGN 309
            WPAD  +   D  R    +W    +      ++P  ++V  HG  ++  G  +SKS   
Sbjct: 556 LWPADFILEAHDQTR--GWFWSQLGMGTAALGDIPY-EEVLMHGHALMPDGRAMSKSKDI 612

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-M 368
           ++DP E I+  G D +R FL+     G D  +  +G++   N      + N+    +  M
Sbjct: 613 LVDPHEAIDRHGRDVMRAFLLSNNPQGDDMRFSWEGMQTMENH--LRTLWNVFRFPLPYM 670

Query: 369 ILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
            L ++D    T           DE +L+       E+  +   +   +AL  +I  V E 
Sbjct: 671 RLDEFDPQATTVEDVQADLELIDEWVLARLQSTKDEMTAHFDERRQDKALNALIDFVVED 730

Query: 424 VDRYFDA---QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
           V R++     ++ WE + +    A+   Y T+  V+R+   LL  + P ++ +I+  L
Sbjct: 731 VSRFYVQAVRERMWEEEDSASKEAA---YATIYRVLRETVALLAPYAPFISEEIYGTL 785



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 24/54 (44%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          E  +      Y +   H+G  +   + DV  RFHR+ G DV    G D HG  I
Sbjct: 41 ESFFFVDGPPYTSGSAHMGTTWNKSLKDVYIRFHRMQGYDVTDRPGYDMHGLPI 94


>gi|221211478|ref|ZP_03584457.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168839|gb|EEE01307.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 945

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 26/259 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAQHAVPV-DEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-VTVEVI 455
             +    H  +A++ +  SE     Y D  K   L  + PD      A T LY +T  ++
Sbjct: 722 YYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTALYHLTQGLL 780

Query: 456 RQLAILLQAFVPKLANKIF 474
           R LA  L +F  + A K+F
Sbjct: 781 RVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|66047579|ref|YP_237420.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500570|sp|Q4ZN90|SYL_PSEU2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|63258286|gb|AAY39382.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Pseudomonas syringae pv. syringae B728a]
          Length = 868

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMKTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|260654931|ref|ZP_05860419.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630246|gb|EEX48440.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 918

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 52/280 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++           G     WPADL++ G D  R  F      +  ++   
Sbjct: 531 ILDVWFDSGVSHFAVL------KGRPELSWPADLYLEGADQHRGWFQTSLLASVAVTGKS 584

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF +  +G K+SKSLGNV+   +++E+ G D LR ++           Y  
Sbjct: 585 PY-KAVLTHGFFMDGEGRKMSKSLGNVVSAQKIVEKYGADILRLWVASTD-------YRS 636

Query: 344 DGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIPTPG-----AFTESDESILSVCS 395
           D    R++  + + +     R   +   +L +  G  P+          E D  +L++ +
Sbjct: 637 D---MRISYKIVDSLVESYRRIRNTARYLLGNLHGFNPSTDRVPYEKMGEFDRWVLALLN 693

Query: 396 RVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKP-------------------W 434
           R ++ + E+ +N   H     +  L V+E+   Y D  K                    W
Sbjct: 694 RTIRRVTESYENYEFHIPTMTIHQLCVNELSSVYLDVNKDRLYADPENDTARRATQTVMW 753

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           EL  T     + VL  T E I Q A   +   P L   +F
Sbjct: 754 ELLTTLTRMLAPVLSFTSEEIWQAA---KEIDPSLEESVF 790



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 36/156 (23%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    + D + ++  ++G    +  G D HG  I           KV  D
Sbjct: 60  YANGEMHLGHALNKSLKDFVVKYRSMNGYACPYVPGWDTHGLPI---------ELKVLKD 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHH--DTCRILWKKISDKGDIYKGCYSGWYSLRD 132
                       LD    D I   E R    +T R  W     +G I  GC++ W     
Sbjct: 111 GG----------LD---KDSISPVELRQKCAETAR-YWIGRQKEGMIRLGCFADW----- 151

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
                 +  Y     +Y  A+ + +  M E+GY +R
Sbjct: 152 ------EHPYMTLQPEYEAAELDALAGMVEKGYVYR 181


>gi|227495342|ref|ZP_03925658.1| leucine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831212|gb|EEH63595.1| leucine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 979

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +E  Y+     YP+    H+GH    I  D LARF R+ G +VL+T G D  G    
Sbjct: 63  LAAKEPYYLLDMFPYPSGSGLHVGHPLGYIATDALARFQRMQGKNVLYTLGFDAFGLPAE 122

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   ++  D+N  N R     + +S+D
Sbjct: 123 QYAIQTGQHPRITTDENVNNMRRQLRRIGLSHD 155


>gi|156089121|ref|XP_001611967.1| valyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154799221|gb|EDO08399.1| valyl-tRNA synthetase, putative [Babesia bovis]
          Length = 972

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +    L+T G+ D       KF+P  L   G DI+ F    W A ++  +L L
Sbjct: 491 VLDTWFSSGLFPLSTLGWPDEKHPDFMKFFPTTLLETGNDIIFF----WVARMVMMSLHL 546

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDAL 325
             K+  +   LH      +GEK+SKS GNV+DP+EVIE   +D+L
Sbjct: 547 VGKLPFNTVYLHPLVRDARGEKMSKSKGNVLDPLEVIEGATLDSL 591



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D LAR+HR+ G   L+  GTD           +AG+ T+  V++     
Sbjct: 61  HIGHALTVSIQDCLARWHRMRGDVTLWIPGTD-----------HAGIATQTVVERMLMQT 109

Query: 81  RDMADVLDISYDDFIR 96
            +     D S +DFI+
Sbjct: 110 ENKTR-HDFSREDFIK 124


>gi|15233478|ref|NP_192344.1| EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA
           ligase/ leucine-tRNA ligase/ nucleotide binding
           [Arabidopsis thaliana]
 gi|4982478|gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana]
 gi|7267192|emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana]
 gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana]
 gi|25090241|gb|AAN72260.1| At4g04350/T19B17_7 [Arabidopsis thaliana]
          Length = 973

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + A
Sbjct: 114 KPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQYA 173

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K    +N   FR     L  SY  D  + TTE  ++   + ++ ++  KG  Y
Sbjct: 174 IETGTHPKTTTLKNIDRFRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGLAY 233

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ V    DG      H PV       +  +++AY D+LL
Sbjct: 234 QAEVPVNWCPALGTVLANEEVV----DGVSERGGH-PVIRKPMRQWMLKITAYADRLL 286



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 43/185 (23%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P +V+ E G D+LR +   E+  G   F D     K  N     G+   
Sbjct: 730 KMSKSRGNVVNPDDVVLEYGADSLRLY---EMFMGP--FRD----SKTWNTSGIEGVHRF 780

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI--- 418
           ++R+  +++    G+  + G+F   D ++++     L+++R       +H+ +A+V    
Sbjct: 781 LARTWRLVI----GLPQSDGSF--KDGTLVTDDEPTLEQLR------TLHKCIAKVTEEI 828

Query: 419 ------SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                 + +S +  + +A   W     N  R          +I    +LL  + P +A +
Sbjct: 829 ESTRFNTGISGMMEFVNAAYKW----NNQPRG---------IIEPFVLLLSPYAPHMAEE 875

Query: 473 IFDIL 477
           ++  L
Sbjct: 876 LWSRL 880


>gi|330969449|gb|EGH69515.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 868

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMKTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY D+LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYADELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|322513918|ref|ZP_08066995.1| isoleucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120253|gb|EFX92206.1| isoleucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 938

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNNA-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|16801193|ref|NP_471461.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526006|sp|Q929Z6|SYI_LISIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16414641|emb|CAC97357.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 921

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|313618002|gb|EFR90151.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
          Length = 921

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|288930704|ref|YP_003434764.1| leucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892952|gb|ADC64489.1| leucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 929

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 88/178 (49%), Gaps = 17/178 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P DL   GKD++  H +++  F   A  P    P+ +  +G++  +G+K+SKS G ++
Sbjct: 578 WYPVDLRSSGKDLVANHLLFY-LFHHVALFPEKYWPRAIAVNGYVSLEGQKMSKSKGPLL 636

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +EE G D  R +++          YD D   +R + +   G+ + + R   ++ +
Sbjct: 637 TMKKAVEEFGADVTRLYILHAAE------YDSDADWRRKDVE---GLASNLRRFYEIVKE 687

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL-AQVISLVSEVDRYF 428
           +Y   +  P   T  D+ ++S   + ++E R+ M+     RA+ A    ++++V  Y 
Sbjct: 688 NY---LKEPEEMTTLDKWLVSRMQKAIKETRDAMEKLQTRRAVNAAFFEMMNDVRWYL 742



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 30/61 (49%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          +REK +I+    Y N   H GH     I D +AR+ R+ G +VLF  G    G  I   A
Sbjct: 26 DREKFFITIPYPYLNGNLHAGHTRTFTIGDAVARYKRMLGYNVLFPMGFHVTGTPIIGLA 85

Query: 63 Q 63
          +
Sbjct: 86 E 86


>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|84029567|sp|Q4L5P4|SYI_STAHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 916

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY------ 226
           L  +Y  + + I+  E  N V    +    ++   R+  D    G   P  P        
Sbjct: 463 LPVFYAENGDIIMTKETVNHVADLFEEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKEM 522

Query: 227 -IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
            IM VW D+ +++    G L+N P+ S    +PADL+  G D  R  F++    A     
Sbjct: 523 DIMDVWFDSGSSH---RGVLENRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRG 575

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 576 QAPY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D++ R+  + G    +  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGNLHMGHALNKIIKDIIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A + +++   DF R            T K  ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALEQIELQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|23016353|ref|ZP_00056110.1| COG0060: Isoleucyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 947

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +       + P  S    WPA L++ G D  R  FH+    +       
Sbjct: 553 ILDVWFDSGCTHAFVLEGEEWPRLS----WPASLYLEGSDQHRGWFHSSVLESCGTRGRA 608

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF+L + G K+SKSLGNV+ P EV+  +G D LR ++V
Sbjct: 609 PY-DAVLTHGFVLDEDGRKMSKSLGNVVAPQEVVGSMGADILRLWVV 654



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 24/161 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG     K
Sbjct: 47  KGREKFILHDGPPYANGNLHIGHALNKILKDVITRSQQMLGKDADYVPGWDCHGLPIEWK 106

Query: 58  IAKAAQNAGVTTK----VFVDQNSRNFRDMADVLDISYDDFIR-----------TTEKRH 102
           I +  ++AG        V   +  R F   A  + I  ++F R           TT   H
Sbjct: 107 IEEKYRDAGKDKDEIDIVTFREECRQF--AAKWIGIQKEEFKRLGITGDWDHPYTTMTNH 164

Query: 103 HDT--CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++  C  L K + D G +YKG     +S+ ++    + EV
Sbjct: 165 AESVICAELGKFLLD-GSLYKGAKPVLWSVVEKTALAEAEV 204


>gi|291320317|ref|YP_003515579.1| leucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752650|emb|CBH40623.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 779

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I D LARF+R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRKGFNVLHPFGWDAFGLPAENAAIKH 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDKGDIY 120
            +  K +  +N  +  +    L IS   F    E    D     W+     K+ + G +Y
Sbjct: 93  NIHPKTWTYKNISSMNENIKKLGIS---FAWNYECITSDEIYTRWEQEIFIKMWNNGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            K     W + +D+    +++V  G   +       P++  E E Y+ ++  Y  +L
Sbjct: 150 RKKALLNWCN-KDKTVLANEQVINGCCWRC----DEPIELKETEQYYLKIRDYAKEL 201



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKS GN + P +++E+ G D +R F++      K+  +  D ++
Sbjct: 527 KSLLTQGMVLKDGAKMSKSKGNTVSPTDLLEKYGADTVRLFILFAAPPAKELEWSDDSVE 586


>gi|297741117|emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 18/162 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL F    W A 
Sbjct: 610 QISQDPD-VLDTWFSSGLFPLTVLGWPDDTQDLKA-FYPTSVLETGHDILFF----WVAR 663

Query: 279 L------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +      L  ++P  +KV+ H  I    G K+SKSLGNVIDP+EVI  + ++ L   L  
Sbjct: 664 MVMLGIKLGGDVPF-RKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEE 722

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                 +    K+G  K    D  NGI    + ++   L  Y
Sbjct: 723 GNLDPSELVVAKEGQVK----DFPNGIAECGADALRFALVTY 760


>gi|224498530|ref|ZP_03666879.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 921

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              GV  K   + +   FR +     +   D  RT  KR
Sbjct: 106 AKKGVKRK---EMSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|163738327|ref|ZP_02145742.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388248|gb|EDQ12602.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 976

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 27/194 (13%)

Query: 182 SHPEFILPIERRNE--VISFVKSGLKDL---SLSRKTFDWGIKIPDDPQYI---MYVWID 233
           + PEF+L  E  N   V +F + G           K  D GI  P+D   +   + VW D
Sbjct: 531 TDPEFLLRNEALNTRIVAAFEEHGADVWYADGFKEKMLD-GIANPEDYDQVFDVLDVWFD 589

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVF 291
           + + +       D  DG+K     AD+++ G D  R  FH+    A       P  + V 
Sbjct: 590 SGSTHAFV--LRDREDGTKDGI--ADVYMEGTDQHRGWFHSSLLQACGTKGRAPY-RNVV 644

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           +HGF L  KG K+SKSLGN I P +++++ G D LR ++ +         Y  D   +R+
Sbjct: 645 THGFTLDEKGNKMSKSLGNTIVPEKIVQQYGADILRLWVAQTD-------YTAD---QRI 694

Query: 351 NADLANGIGNLVSR 364
            A++  G+ +   R
Sbjct: 695 GAEILKGVADGYRR 708



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 10/102 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           ER+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I    
Sbjct: 61  ERKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKI 120

Query: 60  -----KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                K  +N      V   Q  R F D  + + I  ++F R
Sbjct: 121 EEQYRKKGKNKDEVPVVDFRQECRAFAD--EWVGIQREEFKR 160


>gi|46908248|ref|YP_014637.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|226224616|ref|YP_002758723.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825490|ref|ZP_05230491.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854377|ref|ZP_05243725.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931813|ref|ZP_05265172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993251|ref|ZP_05275441.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521953|ref|ZP_05389190.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763676|ref|ZP_07073673.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403188|sp|Q71Y01|SYI_LISMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511508|sp|C1KWW3|SYI_LISMC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46881519|gb|AAT04814.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877078|emb|CAS05789.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258607776|gb|EEW20384.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583367|gb|EFF95399.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594732|gb|EFG02493.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515412|gb|EFK42462.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466360|gb|EGF37517.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 921

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|311107992|ref|YP_003980845.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310762681|gb|ADP18130.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 885

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   + +++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPQYYKWNQWLFLKMLEKGV 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V    DG+ + +    V+  E  GY+ R++ Y D+LL 
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYLRITDYADELLG 210


>gi|220904888|ref|YP_002480200.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869187|gb|ACL49522.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 837

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 12/196 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA 
Sbjct: 33  KPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARNKRMQGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +   N R  R     L  SYD    I T    ++   ++ + ++  KG +Y 
Sbjct: 93  KNNTHPAEWTYANIRTMRAQLKRLGYSYDWSREIATCRPEYYQWEQMFFLRLLKKGLVYR 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           K     W         N+  +    DG  +      VQ  +   +F +++AY D+LL   
Sbjct: 153 KKAPQNWCPSCHTVLANEQVI----DGLCWRCDSRVVQ-KDLTQWFLKITAYGDELLRDL 207

Query: 178 -SYYESHPEFILPIER 192
            +     PE ++ ++R
Sbjct: 208 GTLEGGWPERVIAMQR 223



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 39/248 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-KKVFSHGFILH 298
           D    K+W P D ++ G +    H +Y   F             L  P   + + G +L 
Sbjct: 526 DMDAVKYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDMGFFPPELSEPFNNLLTQGMVLK 585

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+DP E+I++ G D +R F +      +D  +   G++         G 
Sbjct: 586 DGGKMSKSKGNVVDPTEMIKKYGADTVRLFCLFAAPAERDFDWSDSGIE---------GA 636

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR--------VLQEIRENMQNQL- 409
              ++R   + +++   ++P   A   + +   S  +R         +++  E+M ++  
Sbjct: 637 SRFINRVWRLFVEEQARLLPLK-ACASTAQDAQSPEARDLRRREHLTVKKAGEDMGDRFQ 695

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A+A V+ LV+ +  Y   +K   +  T  DR      V    +  +  LL   +P +
Sbjct: 696 FNTAIAAVMELVNTM--YISREK---MGSTEGDR-----RVFSSAMATVLTLLSPIIPHV 745

Query: 470 ANKIFDIL 477
             ++++ L
Sbjct: 746 CEELWNRL 753


>gi|203284734|ref|YP_002222474.1| isoleucyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|259511495|sp|B5RN32|SYI_BORDL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|201084177|gb|ACH93768.1| isoleucyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 1044

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 14/204 (6%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDG 345
           K V  +G +L   G+K+SKSL N  DPI++I   G DALR +L+       D   Y  DG
Sbjct: 579 KNVIVNGLVLSSDGKKMSKSLKNYTDPIQIINTFGADALRLYLIMSPVIKADDLKYSDDG 638

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVCSRVLQ 399
           +K  V  ++   I N  S  ++  + D      TP            D+ I+S    + Q
Sbjct: 639 VKD-VLKNIIIPIWNAYSFFITYAIIDK----FTPNNHVNLYKTNILDKWIISEIESLKQ 693

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQL 458
            + E +    + +++  +++ + +++ ++  +      K+  D   T  Y T+   ++ L
Sbjct: 694 ILNEEIDKYNLTKSIDVLLTFIDKLNNWYIRRSRRRFWKSENDNDKTDAYETLYYTLKNL 753

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
            ++L  F+P L  +I+  L   +E
Sbjct: 754 MLMLAPFIPFLTEEIYQNLKTKNE 777


>gi|29840436|ref|NP_829542.1| valyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539536|sp|Q822K4|SYV_CHLCV RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29834785|gb|AAP05420.1| valyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 940

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 93/243 (38%), Gaps = 75/243 (30%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + +++D L  +  +    I P E     +S+V + L+D  +SR+ + WG +IP   
Sbjct: 363 WFVSVESFRDSLREFVANDSIKIFPPEFTRNYLSWVNN-LRDWCISRQLW-WGHRIPVWY 420

Query: 222 ---DDPQYIMY------------------------VWIDALTNYLTTTGYLDNPDGSKAK 254
              D+ + + Y                         W  +    LT  G+ D   G   K
Sbjct: 421 HKSDEDRILCYDGEGIPEEVAQDPDSWYQDPDVLDTWFSSGLWPLTCLGWPDVESGDLEK 480

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHKG----------- 300
           F+P  + + G DIL F  +     L SA +   P    VF HG I  K            
Sbjct: 481 FYPTAVLITGHDIL-FFWVTRMVLLCSAMVEEKPF-SDVFLHGLIFGKSYKRYNDLGEWT 538

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS GNVIDP+E+I + G DA+R  L    +C 
Sbjct: 539 YISGEEKHAYDMGKALPKDVVAKWEKLSKSKGNVIDPLEMIGKYGADAVRMTLC---SCA 595

Query: 337 KDG 339
             G
Sbjct: 596 NRG 598



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 50/177 (28%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN---S 77
           H+GHA    + DVL R+ R+ G +V +  GTD           +AG+ T+  V+++   S
Sbjct: 54  HMGHALVNTLQDVLIRYKRMSGFEVCWVPGTD-----------HAGIATQTVVERHLYAS 102

Query: 78  RNFRDMADVLDISYDDFIR-------------------------------TTEKRHHDTC 106
              R     +D S ++FI+                               T E   +   
Sbjct: 103 LGKRR----IDFSREEFIKHVWEWKEKSEGVILSQLRQLGCSCDWSRLRFTMEPLANRAV 158

Query: 107 RILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  +K + DKG IY+G Y   W  +   A  +D+  Y+  DG  Y  ++  V   EE
Sbjct: 159 KKAFKALFDKGHIYRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYKVVDSSEE 215


>gi|86131630|ref|ZP_01050228.1| valine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85818075|gb|EAQ39243.1| valine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 877

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 18/202 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           M  W  +    ++    + NPD  +  ++ P +  V G DIL F    W A ++ A    
Sbjct: 458 MDTWFSSWLWPMSVFDGVRNPDNEEFNYYYPTNDLVTGPDILFF----WVARMIIAGYEY 513

Query: 287 PKK-----VFSHGFILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V+  G +  K   K+SKSLGN  D +E+I+E G D +R  L+   A G D  
Sbjct: 514 TDKRPFQNVYLTGLVRDKQRRKMSKSLGNSPDALELIKEYGADGVRVGLLLSSAAGNDLM 573

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +D+D LK+        G       + S+I   + D  IP P    +  E   +  ++ L 
Sbjct: 574 FDEDLLKQ------GKGFIKKNLSAFSLIQGWEIDETIPQPAHSAQGIEWYTNRFNQTLL 627

Query: 400 EIRENMQNQLIHRALAQVISLV 421
           EI ++     I  AL     +V
Sbjct: 628 EIEDHFSKYRISDALMASYKVV 649


>gi|332170512|gb|AEE19767.1| valyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 877

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 18/202 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           M  W  +    ++    + NPD  +  ++ P +  V G DIL F    W A ++ A    
Sbjct: 458 MDTWFSSWLWPMSVFDGVRNPDNEEFNYYYPTNDLVTGPDILFF----WVARMIIAGYEY 513

Query: 287 PKK-----VFSHGFILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             K     V+  G +  K   K+SKSLGN  D +E+I+E G D +R  L+   A G D  
Sbjct: 514 TDKRPFQNVYLTGLVRDKQRRKMSKSLGNSPDALELIKEYGADGVRVGLLLSSAAGNDLM 573

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +D+D LK+        G       + S+I   + D  IP P    +  E   +  ++ L 
Sbjct: 574 FDEDLLKQ------GKGFIKKNLSAFSLIQGWEIDETIPQPAHSAQGIEWYTNRFNQTLL 627

Query: 400 EIRENMQNQLIHRALAQVISLV 421
           EI ++     I  AL     +V
Sbjct: 628 EIEDHFSKYRISDALMASYKVV 649


>gi|317181247|dbj|BAJ59033.1| leucyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 806

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|325288845|ref|YP_004265026.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 924

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ T+++   G L   P+ S    +PAD+++ G D  R  F++    +      
Sbjct: 523 IMDVWFDSGTSHV---GVLKLRPELS----YPADMYLEGSDQHRGWFNSSLSTSVAAYGQ 575

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K V +HGF++  KG K+SKS GN +DP++V+ ++G D LR ++
Sbjct: 576 APY-KTVLTHGFLVDEKGRKMSKSQGNGVDPLQVVRDMGADILRLWV 621



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 19/136 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKI 58
           R K  +     Y N   H+GHA   ++ D++ RF  + G D  +  G D HG     Q I
Sbjct: 47  RRKFILHDGPPYANGDIHLGHALNKVLKDIIIRFKTMQGYDAPYVPGWDTHGLPIEQQVI 106

Query: 59  AKAAQNA-GVTT-----------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
            K   N   V+T           K +V+     F+ +   +  ++D+   T  K +    
Sbjct: 107 KKLGLNRHAVSTLEFRARCSDYAKEYVEIQKAEFKRLG--VRGNWDNAYLTLHKEYEAAQ 164

Query: 107 RILWKKISDKGDIYKG 122
             ++ +++ KG IYKG
Sbjct: 165 IGVFGEMAKKGYIYKG 180


>gi|307638226|gb|ADN80676.1| Leucyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 806

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNL 361
           GNV+ P E++++ G DA R F++      K+  ++ + L+      KR+  D AN I   
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALEGAHRFIKRL-YDKANAISPT 636

Query: 362 VSR 364
            S+
Sbjct: 637 TSK 639


>gi|254831739|ref|ZP_05236394.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              GV  K   + +   FR +     +   D  RT  KR
Sbjct: 106 AKKGVKRK---EMSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|254827094|ref|ZP_05231781.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258599477|gb|EEW12802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              GV  K   + +   FR +     +   D  RT  KR
Sbjct: 106 AKKGVKRK---EMSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|148244477|ref|YP_001219171.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166229778|sp|A5CX61|SYI_VESOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146326304|dbj|BAF61447.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 955

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 22/219 (10%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  ++   P  K V +HGF++ K G+K+SKSLGN+I P 
Sbjct: 547 ADLYLEGSDQHRGWFQSSLISSVAINKKAPY-KNVLTHGFVVDKDGKKMSKSLGNIISPQ 605

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++  VG D LR ++      G+    D+  + KR +AD    I N    ++  +L + +
Sbjct: 606 KIVNNVGADILRLWIASTDYTGEMTVSDE--ILKR-SADSYRRIRN----TMRFMLANMN 658

Query: 375 GM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           G     +    A  + D  I++   ++ + I EN      H  +  + +  S      Y 
Sbjct: 659 GFTQKNLVDTKAMLDLDRWIVAKTQKIQEAIIENYDTYQFHYIVKSINNFCSNDLGGFYL 718

Query: 429 D--AQKPWELKKTNPDR--ASTVLY-VTVEVIRQLAILL 462
           D    + +  +K +P R  A T LY +T  ++R L+ +L
Sbjct: 719 DIIKDRQYTTQKDSPARRSAQTALYHITQMMVRWLSPIL 757



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   ++ D++ +   L G D  +  G D HG  I    +       + +D
Sbjct: 59  YANGDIHIGHAVNKVLKDIIVKSKSLSGFDAPYVPGWDCHGLPIELNVEKEYGKVGIKID 118

Query: 75  QNSRNF--RDMAD 85
            N+  +  R+ AD
Sbjct: 119 VNTFRYKCREYAD 131


>gi|126465639|ref|YP_001040748.1| valyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014462|gb|ABN69840.1| valyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 815

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 15/196 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
            W D+  + L  TGY  N D    K +   L   G+DI+R    Y  + L    L   P 
Sbjct: 472 TWFDSSISVLYVTGYKRN-DKLFRKAFKYTLRPQGQDIIRTWLYY--SLLRVYQLTGKPA 528

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V   G  L  KGE + KS GNVIDP   IE+ G DA RY+       G D  + +  
Sbjct: 529 FKWVRITGMGLDEKGEAMHKSKGNVIDPEPYIEKYGADAFRYWAAASAKLGYDYRFSEQV 588

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R     A  + N ++R +SM  K     +  P      DE+ ++  + +L+EI E  
Sbjct: 589 I--RTGFLFATKLWN-IARFISMFQKPEKKPMLRP-----LDEATIAYFNNMLKEIDEAY 640

Query: 406 QNQLIHRALAQVISLV 421
            N  +   +  +   +
Sbjct: 641 SNLDVFEPITSIYQFI 656


>gi|85101721|ref|XP_961203.1| leucyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|135142|sp|P15181|SYLM_NEUCR RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|168830|gb|AAA33599.1| leucyl-tRNA synthetase [Neurospora crassa]
 gi|11595633|emb|CAC18253.1| leucine--tRNA ligase precursor, mitochondrial [Neurospora crassa]
 gi|28922744|gb|EAA31967.1| leucyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 994

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 28/208 (13%)

Query: 2   KEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EK  Y+     YP+   H+GH     IADV+ARF  L G  VL   G D  G     
Sbjct: 80  KEDEKNKYVLPMFPYPSGHLHLGHLRVYTIADVIARFQTLQGHKVLLPMGWDAFGLPAEN 139

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTEKRHHDTCRILW 110
           AA   G+    +   N    ++    ++ S+D          DF + T+K        ++
Sbjct: 140 AAIERGINPATWTKANIAKMKEQLGHMNGSWDWNCELATCDPDFYKHTQK--------IF 191

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
             + +KG  Y+      Y   D+    +++V   A+G  + +    V+  + + +F ++S
Sbjct: 192 LALHEKGLAYQAEAEVNYDPVDKTVLANEQV--DANGCSWRSGAR-VEKRKLKQWFLKIS 248

Query: 171 AYQDKL------LSYYESHPEFILPIER 192
            +++ L      L+  E+ PE +L +++
Sbjct: 249 EFRESLLKDLETLAKNEAWPERVLAMQK 276


>gi|325996820|gb|ADZ52225.1| Leucyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998412|gb|ADZ50620.1| Leucyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 806

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNL 361
           GNV+ P E++++ G DA R F++      K+  ++ + L+      KR+  D AN I   
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALEGAHRFIKRL-YDKANAISPT 636

Query: 362 VSR 364
            S+
Sbjct: 637 TSK 639


>gi|313637568|gb|EFS02978.1| leucyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 803

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 51/239 (21%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNENGLEGSRKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           G L  +                   TE + ++      +++ +  + +N   +  ++Q++
Sbjct: 638 GTLAEKVT-----------------TEPNANLEKAYHHMVKTVTNHFENLRFNTGISQLM 680

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++E  +          + T P           E +     LL    P LA ++++IL
Sbjct: 681 IFINEAYK----------QDTIPK----------EYVEGFVQLLSPIAPHLAEELWEIL 719



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|225872764|ref|YP_002754221.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792609|gb|ACO32699.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 887

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ Q H+GH     I D LAR+  + G +VL   G D  G     AA 
Sbjct: 60  KPKYYVLEMLPYPSGQLHMGHVRNYSIGDALARYMWMQGYNVLHPMGWDAFGLPAENAAL 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                 + +   N  +     D L +SYD  + + T    ++   +  + ++ +KG  Y 
Sbjct: 120 KNNTPPREWTLSNIAHMHKQMDRLGLSYDWRNEVTTCLPEYYRWNQWFFLRMYEKGLAYR 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K     W         N+  V    +G  +  +   V+  + E +F R++ Y  +L   L
Sbjct: 180 KQSKVNWCPQCATVLANEQVV----NGCCWRHEDQIVEQRDLEQWFLRITNYAQELLDDL 235

Query: 178 SYYESHPEFILPIER 192
           +  E  PE +  ++R
Sbjct: 236 NQLEGWPEKVRTMQR 250



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 21/186 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG 300
           D     +W P D ++ G +    H IY   W   +    +  N     ++F+ G ++  G
Sbjct: 582 DTDTVAYWFPIDQYIGGVEHAILHLIYSRFWTKVMRDLGIVKNDEPATRLFTQGMVIKNG 641

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+ P ++I   G DA R + +      +D  + +DG+          G+  
Sbjct: 642 AKMSKSKGNVVSPEDMIARYGADATRMYALFAAPPDRDLDWQEDGVA---------GVSR 692

Query: 361 LVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            +SR   + ++  +      G   A + +++++L    + +++I E+   +   +  +A 
Sbjct: 693 FLSRVYRLAMRHAERAKQASGGAEANSATEQALLRKLHQTIRKITEDFGGRWHFNTCIAA 752

Query: 417 VISLVS 422
           ++ LV+
Sbjct: 753 IMELVN 758


>gi|237756463|ref|ZP_04584999.1| leucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691377|gb|EEP60449.1| leucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 608

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E  K Y+     YP+ + H+GH     I DV+ R++R+ G + L   G D  G     A
Sbjct: 27  EEGNKYYVLEMFPYPSGKIHMGHVRNYAIGDVVNRYYRMAGKNTLHPMGWDAFGMPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    R     L  SY  D  + T    ++   + ++ K+ +KG  
Sbjct: 87  AIKHGVHPAKWTYENIDYMRQQLKRLGFSYDWDREVTTCNPEYYKWNQWIFLKMFEKGIA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+      +   D     +++V    +G+ +    + VQ  E   ++ +++ Y ++LL 
Sbjct: 147 YRKSAIVNWCPHDLTVLANEQV---IEGKCWRCGTSVVQ-KEIPSWYLKITDYAERLLE 201


>gi|108759560|ref|YP_632229.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108463440|gb|ABF88625.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 828

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 9/177 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH       D+++R+ R+ G DVL   G D  G    + A
Sbjct: 35  KPKAYILDMFPYPSGAGLHVGHPEGYTATDIVSRYLRMRGYDVLHPMGWDAFGLPAEQHA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N   F+     L  SYD    + TT+  +    + L+ K+ D+G  Y
Sbjct: 95  LETGTHPADTTAKNVATFKRQLKSLGFSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLAY 154

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           +      W +       N++ +    DG+     H PV  +    +  R++AY D+L
Sbjct: 155 QAELPVNWCAALGTVLANEEVI----DGKSERGSH-PVVRLPLRQWTLRITAYADRL 206



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 42/227 (18%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFIL-HKGEKISKSL 307
           P DL+V G +    H +Y   W   L    L     P  KK+   G IL    EK+SKS 
Sbjct: 548 PVDLYVGGSEHAVLHLLYARFWHKVLFDCGLVTHAEPF-KKLVHQGMILGENNEKMSKSR 606

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++ + G DALR +         + F       K    +   G+   + R  +
Sbjct: 607 GNVVNPDDIVRQFGADALRMY---------EMFMGPLEAVKPWQTNGVIGVRRFLDRVWN 657

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M+    +     P   TE    +L    + ++++ E+++    + A++ ++ L + +   
Sbjct: 658 MLAFVTEDAGGAPAELTEDARRLL---HKTVKKVGEDIEALRFNTAVSAMMILANALA-- 712

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                  EL +           V +E  R  A +L  F P L+ +++
Sbjct: 713 -------ELPR-----------VPLEAARVFARILSPFAPHLSEELW 741


>gi|88603864|ref|YP_504042.1| valyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189326|gb|ABD42323.1| valyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 865

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ +  I T   YP  + HIG+A+     D LAR+ R+ G +V+F  G D HG       
Sbjct: 37  EKPQFVIDTPPPYPTGEFHIGNAFNWCYIDFLARYKRMKGYNVMFPQGWDCHGLPTEVKV 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +     TK  VD+  + FR+M   L I     +R + +R
Sbjct: 97  EEIHKITKNDVDR--QKFREMCRELTIGNIRKMRASMRR 133



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIY--WPAFLLSA 282
           ++  W+D+  + +  TG+    DG++     +PA +   G DI+R  A Y    A  L+ 
Sbjct: 450 VLDTWMDSSISVMHVTGW----DGTQKVPPLFPAQIRPQGHDIIRTWAFYTILRAVSLTG 505

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  +++  +G +L + G K+SKS GNV  P E++E+ G D+LR +     A G D  +
Sbjct: 506 GKPW-EQILVNGMVLGEDGFKMSKSRGNVTVPEEILEQYGADSLRQWAALGAATGSDIQF 564

Query: 342 DKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           + + +    R    + N     +SR   M L D             +D  +L+  S+ ++
Sbjct: 565 NWNDVVAANRFLTKMWN-----ISRFALMQL-DRAQYKADAQVTALADRWLLTKLSQTVR 618

Query: 400 EIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIR 456
           ++ E+++     +AL  +     +V  D Y +  K      ++  D A   +  +++ I 
Sbjct: 619 DVSESLETYQFDKALKAIREFAWDVLADNYIEIVKGRLYSDSDTRDGACVAIRTSMDAIC 678

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           +   +L  F P  A +++  +
Sbjct: 679 R---MLAPFTPYFAEEVWSFM 696


>gi|47093189|ref|ZP_00230963.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018440|gb|EAL09199.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|71483030|gb|AAZ32464.1| valyl tRNA synthetase [uncultured euryarchaeote Alv-FOS1]
          Length = 855

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 23/260 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W+D+  + L  T +  + +    K +P  L     DI+R  A Y    +L       +K
Sbjct: 455 TWVDSSISPLYNTFWARD-EKMFNKLYPMSLRPQSHDIIRTWAFY---TILRCGATTGEK 510

Query: 290 ----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDK 343
               +F   FIL   G  +  S GNV+DP+E+I+E G DA RYF       G+D  F  K
Sbjct: 511 PWNDIFVDSFILAPDGRPMHTSWGNVVDPLEIIDEYGTDAFRYF-AGNCTIGQDTPFRYK 569

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D  + R        +G  V  +++      DG I  P      D  +L+  S+V++E  E
Sbjct: 570 DVKRGRKLIIKLYNLGRFVKNAIA------DG-ITEPDKLKLMDRWLLTEYSKVVKEATE 622

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            M +    +A    I L+     +  A    E+ K      ST  Y        +  +  
Sbjct: 623 LMDSYRYDKA----IKLIENFTWHIFADHYVEMVKHRIGEEST-KYTLYTAFLGIIKMFS 677

Query: 464 AFVPKLANKIFDILFVADEN 483
            F+P +  +++  LF   E 
Sbjct: 678 PFMPHITEELYQELFKEREG 697


>gi|256383708|gb|ACU78278.1| valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384539|gb|ACU79108.1| valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455763|gb|ADH21998.1| valine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 872

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 35/214 (16%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+ + WG +IP 
Sbjct: 359 DQWFVKMDKFKNMVIDLQNSDNKINFYPNRFSDVLNRWMTNAHDWCISRQLW-WGHQIPC 417

Query: 222 --DDPQYIMYVWIDA---LTNYLTTTGYLD--------------NPDGSKAKFW----PA 258
                   MYV I+    + N+      LD              N  G +++++    P 
Sbjct: 418 WYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYFKNYFPT 477

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVID 312
            + V G DI+ F    W A ++   L   K+     V  HG +  +   K+SKSLGN ID
Sbjct: 478 SVLVTGYDIIFF----WVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNGID 533

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P++VI   G D+LR FL+     G+D  Y  + +
Sbjct: 534 PMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKI 567



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA++  + D + RF +L G D LF  G D  G
Sbjct: 53 HIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSG 87


>gi|188996192|ref|YP_001930443.1| leucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931259|gb|ACD65889.1| leucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 607

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E  K Y+     YP+ + H+GH     I D++ R++R+ G + L   G D  G     A
Sbjct: 27  EEGNKYYVLEMFPYPSGKIHMGHVRNYAIGDIVNRYYRMAGKNTLHPMGWDAFGMPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    R     L  SY  D  + T    ++   + ++ K+ +KG  
Sbjct: 87  AIKHGVHPAKWTYENIDYMRQQLKRLGFSYDWDREVTTCNPEYYKWNQWIFLKMFEKGIA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+      +   D     +++V +G   +       PV   E   ++ +++ Y ++LL 
Sbjct: 147 YRKSAIVNWCPHDLTVLANEQVIEGKCWRC----GTPVVQKEIPSWYLKITDYAERLLE 201


>gi|16804058|ref|NP_465543.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501180|ref|ZP_03669487.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508283|sp|Q8Y5N8|SYI_LISMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16411472|emb|CAD00097.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     +   D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|47096662|ref|ZP_00234249.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254899283|ref|ZP_05259207.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912578|ref|ZP_05262590.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936904|ref|ZP_05268601.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014984|gb|EAL05930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609502|gb|EEW22110.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590567|gb|EFF98901.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              GV  K   + +   FR +     +   D  RT  KR
Sbjct: 106 AKKGVKRK---EMSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|313632954|gb|EFR99884.1| leucyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 806

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 51/239 (21%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNENGLEGSRKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           G L  +                   TE + ++      +++ +  + +N   +  ++Q++
Sbjct: 641 GTLAEKVT-----------------TEPNANLEKAYHHMVKTVTNHFENLRFNTGISQLM 683

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++E  +          + T P           E +     LL    P LA ++++IL
Sbjct: 684 IFINEAYK----------QDTIPK----------EYVEGFVQLLSPIAPHLAEELWEIL 722



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKG 122
            Y+ 
Sbjct: 151 AYEA 154


>gi|289434947|ref|YP_003464819.1| hypothetical protein lse_1582 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171191|emb|CBH27733.1| leuS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 806

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 51/239 (21%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNENGLEGSRKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           G L  +                   TE + ++      +++ +  + +N   +  ++Q++
Sbjct: 641 GTLAEKVT-----------------TEPNANLEKAYHHMVKTVTNHFENLRFNTGISQLM 683

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++E  +          + T P           E +     LL    P LA ++++IL
Sbjct: 684 IFINEAYK----------QDTIPK----------EYVEGFVQLLSPIAPHLAEELWEIL 722



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKG 122
            Y+ 
Sbjct: 151 AYEA 154


>gi|240113933|ref|ZP_04728423.1| valyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268599997|ref|ZP_06134164.1| valyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584128|gb|EEZ48804.1| valyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|195125265|ref|XP_002007102.1| GI12751 [Drosophila mojavensis]
 gi|193918711|gb|EDW17578.1| GI12751 [Drosophila mojavensis]
          Length = 871

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+   H+GH     I+D +ARFHR+ G +V    G D  G     AA 
Sbjct: 61  QNKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFHRMCGKNVFQPIGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +   + L  S+D    + ++   ++   + L+  +  +G  Y+
Sbjct: 121 ERGVAPAEWTKKNIAQMKQQLERLGCSFDWAHELSSSSPEYYKWTQSLFLMLHKRGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEE--------EGYFFRLSA 171
                     +EA  N D V K   AD Q      N   W           + +F R +A
Sbjct: 181 ----------NEALVNWDPVDKTVLADEQ---VDANGCSWRSGAKVEKKLLKQWFIRTTA 227

Query: 172 YQDKLL 177
           Y  +LL
Sbjct: 228 YAKQLL 233


>gi|86136917|ref|ZP_01055495.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85826241|gb|EAQ46438.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 855

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 12/184 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 31  KEKYYVLEMFPYPSGKLHMGHVRNYTMGDVVARYKMSTGHNVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +G   K +   N    ++    L +S D   +F  T ++ ++   + L+    DKG +Y
Sbjct: 91  ASGGHPKDWTYANIAAMKEQMKPLGLSLDWSREFA-TCDEDYYGQQQALFLDFLDKGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  +      N+  E  +G        +    QW      FF++S Y + LLS
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVEAGRGWRSGALVERRELTQW------FFKISDYSEDLLS 203

Query: 179 YYES 182
             E 
Sbjct: 204 ALEG 207



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 29/173 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV++P+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 626 KMSKSKNNVVNPLSIISSYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 683

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +   M           PGA  + DE +L    + ++++   +++   + ++A++    
Sbjct: 684 CDKIGQM----------EPGATGQGDEELLREMHKTIRDVTLGVESFGFNASIARLYGFT 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +             L K+   +A+       + I  LA L+   VP LA  I+
Sbjct: 734 N------------TLAKSKAGQAA-----QKQAIMTLAQLMSPMVPHLAEDIW 769


>gi|284802465|ref|YP_003414330.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995607|ref|YP_003417375.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058027|gb|ADB68968.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061074|gb|ADB72013.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              GV  K   + +   FR +     +   D  RT  KR
Sbjct: 106 AKKGVKRK---EMSIAEFRKLCAEYAMKQVDGQRTGFKR 141


>gi|322696499|gb|EFY88290.1| Isoleucyl-tRNA synthetase, putative [Metarhizium acridum CQMa 102]
          Length = 1072

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 18/260 (6%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
            +N D      +PAD    G D  R  F+ +      L    P  K V  +G +L + G+
Sbjct: 531 FENHDEFDGGHFPADFIAEGLDQTRGWFYTLTVLGNKLFGKSPF-KNVLVNGMVLAEDGK 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN- 360
           K+SKSL N  DP  + E  G DALR +L+       +    K+   K + + +   + N 
Sbjct: 590 KMSKSLKNFPDPSHIFERYGSDALRLYLINSPVVKAEPLRFKESGVKEIVSKVLLPLWNS 649

Query: 361 --LVSRSVSMILKDY------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               S   ++  K        D    T G     D  +L+ C  +LQ I + M+   ++ 
Sbjct: 650 YRFFSEQAALYKKTTGQDFVADITFSTGGLNNVMDRWVLAECQSLLQFIEQEMRGYRVYT 709

Query: 413 ALAQVISLVSEVDRY---FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + +++ ++ ++  +   F+ ++            S  L   ++V+  L   L  F+P +
Sbjct: 710 VVPRLLKMIDDLTNWYIRFNRKRLKGAAGLGEADTSAALNTLLQVLFTLVTALAPFIPFI 769

Query: 470 ANKIFDIL--FVADENRCFQ 487
              I+ +L  F+ D    F+
Sbjct: 770 TEHIYGLLRPFLGDVLASFR 789


>gi|217963834|ref|YP_002349512.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782418|sp|B8DBR2|SYI_LISMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217333104|gb|ACK38898.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571595|emb|CAR84774.1| ileS [Listeria monocytogenes L99]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|161523963|ref|YP_001578975.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351276|ref|YP_001946904.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|254782377|sp|A9AGN6|SYI_BURM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160341392|gb|ABX14478.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335298|dbj|BAG44368.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 26/259 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAQHAVPV-DEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-VTVEVI 455
             +    H  +A++ +  SE     Y D  K   L  + PD      A T LY +T  ++
Sbjct: 722 YYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTALYHLTQGLL 780

Query: 456 RQLAILLQAFVPKLANKIF 474
           R LA  L +F  + A K+F
Sbjct: 781 RVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|240124425|ref|ZP_04737381.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268683054|ref|ZP_06149916.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268623338|gb|EEZ55738.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|154174900|ref|YP_001408244.1| valyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112802782|gb|EAU00126.1| valyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 873

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 10/96 (10%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SANLPLP-KKVFSHGFIL-HKGEK 302
           +G  A+F+P  L + G DIL F    W A ++    +A   LP   ++ H  +   +G K
Sbjct: 478 EGDLAEFYPNTLLITGFDILFF----WVARMMFQGQNALEKLPFDDIYLHALVKDEQGRK 533

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +SKSLGNVIDP++ IEE   D LR+ L      G+D
Sbjct: 534 MSKSLGNVIDPLDSIEEYSADILRFTLALLAVQGRD 569


>gi|15967084|ref|NP_387437.1| leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302546|ref|ZP_07582303.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307316123|ref|ZP_07595567.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|32171577|sp|Q92KW8|SYL_RHIME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15076357|emb|CAC47910.1| Probable leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306897963|gb|EFN28705.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306903216|gb|EFN33806.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 876

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +    V+ +S D
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKVMGLSLD 121



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 20/177 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++         G   
Sbjct: 631 EKMSKSKKNVVDPDDIIGSYGADTARFFVLSDSPPDRDVIWSEAGVE---------GAHR 681

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +  + +     A     E  ++     R L+ +  +      ++A+A++ 
Sbjct: 682 FVQRVWRLLTEAAERLRAVDAAPASGGEGLAVSQAAHRTLKAVEADYDKLAFNKAVARIY 741

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIF 474
            LV+ +           L +    +A   L   V+    + I L+   +P LA + +
Sbjct: 742 ELVNAMAA--------PLTQVASGKADNALTAAVKDAAAILINLIAPMMPHLAEECW 790


>gi|118581995|ref|YP_903245.1| isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504705|gb|ABL01188.1| Isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 924

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++          + S A   PADL++ G D  R  FH+    +     + 
Sbjct: 530 ILDVWFDSGVSHAAVL------EDSPALRSPADLYLEGSDQHRGWFHSSLLESVGTRGSA 583

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF+L  +G K+SKS+GNV+ P +VI++ G D LR ++  +
Sbjct: 584 PY-KSVLTHGFVLDGQGRKMSKSMGNVVAPEDVIKKFGADILRLWVAAQ 631



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+R    +     Y N   HIGHA   ++ D++ +  R++G    +  G D HG  I
Sbjct: 45  KDRPLFVLHDGPPYANGHIHIGHALNKVLKDIVLKVKRMEGFHAPYVPGWDCHGLPI 101


>gi|255024564|ref|ZP_05296550.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 219

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S+    PADL++ G D  R  F++    A  ++   
Sbjct: 3   IMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLTTAVAITGEA 56

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++
Sbjct: 57  PY-RNVLSHGFALDGEGRKMSKSLGNTLLPSKVIKQLGADIVRLWV 101


>gi|240124703|ref|ZP_04737589.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268683278|ref|ZP_06150140.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268623562|gb|EEZ55962.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|254509941|ref|ZP_05122008.1| isoleucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533652|gb|EEE36640.1| isoleucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 972

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 11/121 (9%)

Query: 217 GIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FH 271
           GI  PDD   +   + VW D+ + +       D  DG++     AD+++ G D  R  FH
Sbjct: 566 GIANPDDYDQVFDVLDVWFDSGSTHAFV--LRDREDGTEDGI--ADVYMEGTDQHRGWFH 621

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +    A       P  + V +HGF L  KG K+SKSLGN I P +V+E+ G D LR ++ 
Sbjct: 622 SSMLQACGTKGRAPY-RNVVTHGFTLDAKGNKMSKSLGNTIVPEKVVEQYGADILRLWVA 680

Query: 331 R 331
           +
Sbjct: 681 Q 681



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG        
Sbjct: 54  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKIE 113

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++  K  +N      V   Q  R F +    +D+  D+F R
Sbjct: 114 EQYRKKGKNKDEVNIVDFRQECRKFAE--GWIDVQRDEFKR 152


>gi|188994381|ref|YP_001928633.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594061|dbj|BAG33036.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 1137

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 7/103 (6%)

Query: 249 DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305
           DGS    +PAD    G D  R  F  ++  A ++S      K V S+G +L  KG K+SK
Sbjct: 636 DGS---VFPADFIAEGVDQTRGWFFTLHAIATMISGTSSF-KVVVSNGLVLDKKGNKMSK 691

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            LGN +DP E I++ G D LR++++   +   +  +D DG+++
Sbjct: 692 RLGNAVDPFETIKKYGSDPLRWYMITNSSPWDNLKFDTDGVEE 734


>gi|59802127|ref|YP_208839.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|194099950|ref|YP_002003089.1| valyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|240017512|ref|ZP_04724052.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240116666|ref|ZP_04730728.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|254494687|ref|ZP_05107858.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268602334|ref|ZP_06136501.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|81311152|sp|Q5F5W0|SYV_NEIG1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|59719022|gb|AAW90427.1| putative valyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|193935240|gb|ACF31064.1| valyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|226513727|gb|EEH63072.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268586465|gb|EEZ51141.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|34557610|ref|NP_907425.1| leucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|48428520|sp|Q7M926|SYL_WOLSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34483327|emb|CAE10325.1| LEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 819

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D +AR  R    +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYCIGDAIARHFRKQNFNVLHPIGWDAFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------ISDKG 117
               K +   N  N R+  D L +S+ +      +R   TC  ++ K        + ++G
Sbjct: 92  KSHPKKWTYDNISNMREELDSLGLSFSN------EREFATCDPIYSKWEQKFFIDMWNRG 145

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            IY K  +  W    D+    +++V    +G+ +      VQ  E   Y+ +++ Y ++L
Sbjct: 146 LIYRKKGFLNWCP-NDQTVLANEQVI---EGRCWRCDTEVVQ-KEMFQYYVKITDYAEEL 200

Query: 177 LSYYES----HPEFILPIER----RNEVISFV 200
           L   ++     P  +L ++R    R+E +SF 
Sbjct: 201 LGSLDTLEGRWPSQVLTMQRNWIGRSEGLSFA 232



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GNV+DP E+IE  G D  R F++
Sbjct: 573 LLTQGMVLKDGAKMSKSKGNVVDPDELIERFGADTARLFVL 613


>gi|313623007|gb|EFR93300.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 921

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ S+    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|297205818|ref|ZP_06923213.1| isoleucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148944|gb|EFH29242.1| isoleucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 960

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PADL++ G D  R  F++    +  +S + P  K + S GF+L  KG K+SKSLGNVI 
Sbjct: 579 YPADLYLEGSDQYRGWFNSSLITSVAVSGHAPY-KSILSQGFVLDDKGHKMSKSLGNVIS 637

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +V++++G + +R ++ 
Sbjct: 638 PNDVVKQMGAEIIRLWVA 655



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           + N   H+GH+   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 88  FANGNIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVDRKTMDR 147

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         +D+   +F+ +  + D ++  +I    K   +  R+   K+ +KG 
Sbjct: 148 AEYRELCRKYAMEQIDKQRTDFKRLGVMADWNH-PYITLQPKFEAEEIRVF-GKMFEKGY 205

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + EV
Sbjct: 206 IYKGLKPVYWSPSSESTLAEAEV 228


>gi|218672951|ref|ZP_03522620.1| leucyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 274

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLD 121


>gi|86359694|ref|YP_471586.1| leucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|123724702|sp|Q2K2S7|SYL_RHIEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86283796|gb|ABC92859.1| leucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 876

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 20/183 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
             GV    +  QN  + +     + +S D        R   TC +        L+    +
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLD------WSREFATCDVDYYQHQQHLFLDFLE 146

Query: 116 KGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG +Y K     W  + +    N+  +    DG+ + +    V+  E   +FF+++ +  
Sbjct: 147 KGLVYRKQSKVNWDPVDNTVLANEQVI----DGRGWRSGAL-VEQRELTQWFFKITDFSQ 201

Query: 175 KLL 177
           +LL
Sbjct: 202 ELL 204



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 7/122 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       A+    
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPERDVIWSEAGVEG------AHRFTQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R +S        + P P +  E+  ++     + L+ ++ +      ++A+A++  L
Sbjct: 685 RLWRLISEAADCLSAVAPAPASEGEA-LTVSQAAHKTLKAVQNDYDKLWFNKAVARIYEL 743

Query: 421 VS 422
           V+
Sbjct: 744 VN 745


>gi|34541247|ref|NP_905726.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417092|sp|Q7MUD3|SYI_PORGI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34397563|gb|AAQ66625.1| isoleucyl-tRNA synthetase, putative [Porphyromonas gingivalis W83]
          Length = 1137

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 7/103 (6%)

Query: 249 DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305
           DGS    +PAD    G D  R  F  ++  A ++S      K V S+G +L  KG K+SK
Sbjct: 636 DGS---VFPADFIAEGVDQTRGWFFTLHAIATMISGTSSF-KVVVSNGLVLDKKGNKMSK 691

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            LGN +DP E I++ G D LR++++   +   +  +D DG+++
Sbjct: 692 RLGNAVDPFETIKKYGSDPLRWYMITNSSPWDNLKFDTDGVEE 734


>gi|319638559|ref|ZP_07993321.1| isoleucyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400308|gb|EFV80967.1| isoleucyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 930

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 39/275 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ + + +     +  D      WPADL++ G D  R  F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLKQREELD------WPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+ NV+ P EV  E G D LR +       G+     + 
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIRNVVAPQEVYNEFGADILRLWAASTDYSGELSISKE- 647

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL-QEIRE 403
            + KRV           +  ++S +  +     P   A  ++D   +   + VL ++++E
Sbjct: 648 -ILKRVTESYRR-----IRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARQLQE 701

Query: 404 NMQNQL-----IHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVL 448
            +          H A+  ++S  SE           DR +  +     +++    A T L
Sbjct: 702 RLAGDFYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRS----AQTAL 757

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y    + R L +L+   +     + +DI+   +E+
Sbjct: 758 Y---HITRSLVLLIAPILCFTGEEAWDIIGGGEED 789



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI 102


>gi|260439575|ref|ZP_05793391.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291042810|ref|ZP_06568551.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291013244|gb|EFE05210.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|256850938|ref|ZP_05556327.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661152|ref|ZP_05862066.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256616000|gb|EEU21188.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548089|gb|EEX24065.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 930

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PADL++ G D  R  F++    +  +S + P  K + S GF+L  KG K+SKSLGNVI 
Sbjct: 549 YPADLYLEGSDQYRGWFNSSLITSVAVSGHAPY-KSILSQGFVLDDKGHKMSKSLGNVIS 607

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +V++++G + +R ++ 
Sbjct: 608 PNDVVKQMGAEIIRLWVA 625



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           + N   H+GH+   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVDRKTMDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         +D+   +F+ +  + D ++  +I    K   +  R+   K+ +KG 
Sbjct: 118 AEYRELCRKYAMEQIDKQRTDFKRLGVMADWNH-PYITLQPKFEAEEIRVF-GKMFEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + EV
Sbjct: 176 IYKGLKPVYWSPSSESTLAEAEV 198


>gi|288940654|ref|YP_003442894.1| leucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896026|gb|ADC61862.1| leucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 851

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N    +     L   YD    + T +  ++   + L+ ++ +KG  Y+
Sbjct: 92  QHGIPPSQWTRSNIEYMKGQLKSLGFGYDWERELATCDPDYYRWEQWLFTRMVEKGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-- 179
              +  +   D+    +++V    DG+ + +    V+  E E +  R++ Y  +LL    
Sbjct: 152 AKATVNWDPIDQTVLANEQVI---DGRGWRS-GALVEKREIEQWSVRITDYAQELLDALD 207

Query: 180 -YESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 208 GLDGWPERVRTMQR 221


>gi|4432760|dbj|BAA28842.1| Valyl tRNA Synthetase [Trichomonas vaginalis]
          Length = 722

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 16/196 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +  G+  N +    +++P  +   G DIL F    W +
Sbjct: 384 VTVEQDPD-VLDTWFSSALLPFSGVGWPSNEERLN-RYFPNSILETGWDILTF----WVS 437

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  +L L  KV  H  +LH      +G K+SKSLGNVIDP  VI  + ++ L   +  
Sbjct: 438 RMVMMSLTLTNKVPFHTILLHPLVRDAQGRKMSKSLGNVIDPRHVINGIELEDLVAEIEN 497

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                K+     DG K    AD  NGI    + ++ + L  + G   T         S  
Sbjct: 498 STFDDKEKKIAIDGRK----ADFPNGIPQCGTDAMRLALCSFAGANRTANLNVSVIVSYR 553

Query: 392 SVCSRVLQEIRENMQN 407
           + C+++   +R  + N
Sbjct: 554 NFCNKMWNAVRFALPN 569


>gi|300024794|ref|YP_003757405.1| leucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526615|gb|ADJ25084.1| leucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 874

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV ARF R  G +VL   G D  G     AA
Sbjct: 32  KQAKCYVLEMFPYPSGRIHMGHVRNYAMGDVFARFKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  Q----NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                + G  T   +D      + M   LD S +  I T    ++   + L+  +  KG 
Sbjct: 92  MERKVHPGTWTYANIDTMRGQLKSMGLSLDWSRE--IATCSPNYYRHQQKLFLDLLKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D     +++V    DG+ + +    V+  E   +FF+++ Y ++LLS
Sbjct: 150 AYRKSSKVNWDPVDHTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFKITDYAEELLS 205


>gi|240015063|ref|ZP_04721976.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240081652|ref|ZP_04726195.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240122132|ref|ZP_04735094.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240129102|ref|ZP_04741763.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268597749|ref|ZP_06131916.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268687483|ref|ZP_06154345.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|293398168|ref|ZP_06642373.1| valyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|268551537|gb|EEZ46556.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268627767|gb|EEZ60167.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291611431|gb|EFF40501.1| valyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|239997959|ref|ZP_04717883.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268593808|ref|ZP_06127975.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547197|gb|EEZ42615.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317165402|gb|ADV08943.1| valyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|222150239|ref|YP_002551196.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254782480|sp|B9JV46|SYL_AGRVS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221737221|gb|ACM38184.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 876

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN  + R     + +S D   +F  T +  ++   + L+  + +KG +Y
Sbjct: 93  QNKVHPKDWTYQNIASMRAQLKSMGLSLDWSREFA-TCDVEYYQRQQYLFLDMMEKGLVY 151

Query: 121 K 121
           +
Sbjct: 152 R 152



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 31/222 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PAD+ V   D  R       AFLLS+              +   EK+SKS  NVIDP ++
Sbjct: 602 PADIRVEDVDGARR------AFLLSSG---------EEVTIGSVEKMSKSKKNVIDPDDI 646

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +   G D  R+F++ +    +D  + + G++   +      +  LVS +  ++       
Sbjct: 647 LGSYGADTARFFVLSDSPPDRDVIWSEAGIEG--SHRFVQRLWRLVSEAADVLRTSAS-- 702

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             TP A   +  ++     + LQ +  ++     ++A+A++  L++ +           L
Sbjct: 703 --TP-AKDGAGRAVSQAAHKTLQAVGADLDKLAFNKAVARIYELLNTLAA--------PL 751

Query: 437 KKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIFDIL 477
            +     A T     V    ++ I ++   +P LA + + +L
Sbjct: 752 TQVASGNADTSFVAAVRNATEILIQIIAPMMPHLAEECWAVL 793


>gi|148554014|ref|YP_001261596.1| valyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|166225532|sp|A5V592|SYV_SPHWW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|148499204|gb|ABQ67458.1| valyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 896

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 27/238 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFI-LHKGEKISKSL 307
           + +P D+ + G DIL F    W A ++   L     +P + ++ HG +    G K+SKS 
Sbjct: 495 RHYPNDVLISGFDILFF----WDARMIMQGLHFMGEVPFRTLYLHGLVRAADGSKMSKSK 550

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGI----GNL 361
           GN +DP+ +I++ G DALR+ L    + G+D   D+  ++   N    L N      GN 
Sbjct: 551 GNTVDPLGLIDKYGADALRFTLTAMESQGRDIKLDEKRVEGYRNFATKLWNAARFAQGNG 610

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +  S +         I  P A    +  I++   R +Q +   + +     +   +   V
Sbjct: 611 IGASTT---------IEPPAAELAVNRWIIAETVRTVQALDLAIADLRYDESANTIYQFV 661

Query: 422 --SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             S  D Y +  KP   +  +  +A+    V   V+ Q+ ++L  F+P +  +++  L
Sbjct: 662 WASFCDWYLELIKPVLAEGADQGQAAETRAVAGWVLDQILVMLHPFMPFITEELWHAL 719



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          HIGHA +  + DVL R  RL G D L+  GTD           +AG+ T++ V++ 
Sbjct: 50 HIGHALDDTLQDVLIRHARLKGKDALWVVGTD-----------HAGIATQMVVERQ 94


>gi|282934149|ref|ZP_06339427.1| isoleucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281301763|gb|EFA94029.1| isoleucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 930

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PADL++ G D  R  F++    +  +S + P  K + S GF+L  KG K+SKSLGNVI 
Sbjct: 549 YPADLYLEGSDQYRGWFNSSLITSVAVSGHAPY-KSILSQGFVLDDKGHKMSKSLGNVIS 607

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +V++++G + +R ++ 
Sbjct: 608 PNDVVKQMGAEIIRLWVA 625



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           + N   H+GH+   I  D++ R+  + G    F  G D HG  I +     GV  K    
Sbjct: 58  FANGNIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVDRKTMDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         +D+   +F+ +  + D ++  +I    K   +  R+   K+ +KG 
Sbjct: 118 AEYRELCRKYAMEQIDKQRTDFKRLGVMADWNH-PYITLQPKFEAEEIRVF-GKMFEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + EV
Sbjct: 176 IYKGLKPVYWSPSSESTLAEAEV 198


>gi|240118888|ref|ZP_04732950.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268604597|ref|ZP_06138764.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268588728|gb|EEZ53404.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 945

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KAVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|193212208|ref|YP_001998161.1| leucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|229559915|sp|B3QM08|SYL_CHLP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193085685|gb|ACF10961.1| leucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 807

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    +
Sbjct: 28  QDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  ++N  +FR+    +  SYD    + TT+  +    + ++ K+ +KG 
Sbjct: 88  FAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREVNTTDPNYFKWTQWIFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKL 176
            Y       W         N++   K ADG  Y     P+ QW+       +++AY ++L
Sbjct: 148 AYISEVDVNWCEELKVVLANEEVDEKIADG--YTVVRRPLRQWV------LKITAYAERL 199

Query: 177 L 177
           L
Sbjct: 200 L 200



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 101/239 (42%), Gaps = 42/239 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D S+ ++W   DL++ G +    H +Y   W   L     +S   P  +++F+ G IL +
Sbjct: 514 DPSREQYWMNVDLYIGGAEHAVLHLLYSRFWHKVLYDLGVVSTKEPF-QRLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V+   G DA+R +         + F       K  N     GI
Sbjct: 573 DNEKMSKSRGNVIPADHVLSTYGADAVRLY---------EMFLGPLEQVKPWNTHGIEGI 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +++   ++  +      T     +  E++L    + ++++ E+ +    + A+++++
Sbjct: 624 SRFLNKVWRLVWDENTETQKTTD--DKPSEAVLKRMHKAIKKVTEDTEQLKFNTAISEMM 681

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LV+E+ +                   T  Y + E    L +LL  F P +  +++  L
Sbjct: 682 VLVNELTK-------------------TGCY-SRETTETLLVLLSPFAPHITEELWQTL 720


>gi|170078301|ref|YP_001734939.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692812|sp|B1XP90|SYL_SYNP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169885970|gb|ACA99683.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 852

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH    +I DV+AR+ R+ G  VL   G D  G     AA
Sbjct: 31  DKPKFYALSMFPYPSGKLHMGHVRNYVITDVIARYKRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            + G+    +  QN    R+    L +S D
Sbjct: 91  IDRGIPPAKWTYQNIAQMREQLKQLGLSID 120



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 24/178 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  V+++ G D  R F++ +    KD  +D   ++ +      N I N
Sbjct: 613 EKMSKSKYNGVDPALVLDKYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLNRIWN 670

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           LV+       +  +  +   G  +++++ +       ++EI+E+++     + A+A+++ 
Sbjct: 671 LVAG-----YEAAETSVKATGELSKAEKDLRRAVHTAIKEIQEDLEGDYQFNTAIAELMK 725

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + +        P                V  E I  L +LL  F P +A++++  L
Sbjct: 726 LNNAIKDVKCVDSP----------------VYKEAIETLILLLAPFAPHIADELWSNL 767


>gi|216264415|ref|ZP_03436407.1| valyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980888|gb|EEC21695.1| valyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 875

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKSLLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|329117589|ref|ZP_08246306.1| isoleucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907994|gb|EGE54908.1| isoleucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 931

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   +   G+LD         +PADL++ G D  R  F++    +  ++
Sbjct: 524 IMDVWFDSGSSWNGVMNARGHLD---------YPADLYLEGSDQYRGWFNSSLITSVAVN 574

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K+V S GF+L  KGEK+SKS GN I P +V ++ G + LR ++ 
Sbjct: 575 GHAPY-KEVLSQGFVLDGKGEKMSKSKGNTILPSDVTKQYGAEILRLWVT 623



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPFVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    ++DKG 
Sbjct: 118 AEYLEMCRTYALSQVDKQREDFKRLGVSADWE-NPYVTLMPQYEADQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|288800980|ref|ZP_06406436.1| leucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331914|gb|EFC70396.1| leucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 956

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y+     YP+ A  H+GH    I  D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  EKQKYYVLNMFPYPSGAGLHVGHPLGYIAGDIFARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
           A   G    +   QN   +R   D +  S+D    +RT + +++
Sbjct: 89  AIQTGQHPLITTQQNIERYRGQLDKIGFSFDWEREVRTCDPKYY 132



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 98/220 (44%), Gaps = 34/220 (15%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  D+L  +A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 685 DVNIVSGDVLDINAFKAWRPEFKNAQFVLENDKYVCGWAI---EKMSKSMFNVVNPDMIV 741

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E  G D LR + +      +   +D +G+         +G    + +   +   + +   
Sbjct: 742 ERYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGCHRFLKKFWGLFFDNRESDQ 792

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T      + E + SV  +++++I  +++N   + A++  +  V+E+          +LK
Sbjct: 793 LTINDEPATKEQLKSV-HKLIKKITADIENFSFNTAVSAFMICVNELS---------QLK 842

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             N            E++ Q+ ILL  F P ++ +++ +L
Sbjct: 843 CHNK-----------ELLEQVVILLNPFAPHISEELWSLL 871


>gi|225455479|ref|XP_002275092.1| PREDICTED: similar to T5E21.11 [Vitis vinifera]
          Length = 817

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 18/162 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           +I  DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL F    W A 
Sbjct: 321 QISQDPD-VLDTWFSSGLFPLTVLGWPDDTQDLKA-FYPTSVLETGHDILFF----WVAR 374

Query: 279 L------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +      L  ++P  +KV+ H  I    G K+SKSLGNVIDP+EVI  + ++ L   L  
Sbjct: 375 MVMLGIKLGGDVPF-RKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEE 433

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                 +    K+G  K    D  NGI    + ++   L  Y
Sbjct: 434 GNLDPSELVVAKEGQVK----DFPNGIAECGADALRFALVTY 471


>gi|83859980|ref|ZP_00953500.1| isoleucyl-tRNA synthetase ileS [Oceanicaulis alexandrii HTCC2633]
 gi|83852339|gb|EAP90193.1| isoleucyl-tRNA synthetase ileS [Oceanicaulis alexandrii HTCC2633]
          Length = 1055

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 120/295 (40%), Gaps = 62/295 (21%)

Query: 221 PDDP---------QYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRF 270
           PDDP         + +  VW D+ +   +   Y  +N D  +A F PAD  V  + + + 
Sbjct: 528 PDDPTGKSTMRRVEDVFDVWFDSGSMPYSQVHYPFENKDWFEANF-PADFIV--EYVAQT 584

Query: 271 HAIYWPAFLLSANL---PLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALR 326
              ++   +LS  L   P  K    HG +L +  +K+SK L N  DP+E  ++ G D +R
Sbjct: 585 RGWFYTLMVLSTMLFDRPPFKNAICHGVVLDENRQKLSKRLRNYPDPMEFFDQYGSDVMR 644

Query: 327 YFLVRE-IACGKDGFYDKDG-----LKKRVNADLANG------IGNLVSRSVSMILKDYD 374
           +FL+   +  G D    K+G     +++   A L N         NL  R   +I    D
Sbjct: 645 WFLISSPVLTGGDLLVPKEGREIASVQREAIAPLLNAYSFFSLYANLEERQPQIITSATD 704

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
            +          D  IL+    +   +   ++   + RA         E   YFDA   W
Sbjct: 705 PL----------DRYILTKTGELANAVNAALEGYDVPRA-------CKEATAYFDALTNW 747

Query: 435 ELKKT------NPDRAS------TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++++      + D A+      T+  V V+V R LA LL    P    K++  L
Sbjct: 748 YIRRSRARFWGSEDEAAKNAAFDTLYTVLVKVSRILAPLL----PITTEKVYKAL 798


>gi|300870124|ref|YP_003784995.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687823|gb|ADK30494.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 853

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     IAD +AR+++L G D+L   G D  G     AA  
Sbjct: 31  KKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYKLLGYDILHPMGWDAFGMPAENAAIE 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
                  +  +N  N +D  ++L  SYD
Sbjct: 91  HKTHPAEWTLKNIANMKDQLNLLGYSYD 118



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 25/187 (13%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           I+ K EK+SKS  N +DP E+IE  G DA+R F++      KD  +  +G+K   +A   
Sbjct: 603 IIVKMEKMSKSKANGVDPAEIIELFGADAVRIFVMFVAPPEKDKEWSDEGVKG--SARFL 660

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQL-I 410
           N I NL  +      KD +             ++  + +    ++ ++++  +++++   
Sbjct: 661 NRIWNLFLK-----YKDEEAFKNAKSFDYNNLSKDGQKLFRKYNKTIKKVTIDIKDRFHF 715

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A ++ L++++           +K  N D  +       EVIR   ILL    P + 
Sbjct: 716 NTAIASLMELLNDMST---------IKLANNDDYAMFR----EVIRGYLILLNPIAPHIT 762

Query: 471 NKIFDIL 477
            +++ IL
Sbjct: 763 EELYQIL 769


>gi|295693491|ref|YP_003602101.1| leucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031597|emb|CBL51076.1| Leucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 804

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+ ++   + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVSEDFESLHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRKNMRQWM------LKMTAY 196


>gi|289193088|ref|YP_003459029.1| valyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939538|gb|ADC70293.1| valyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 883

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 25/279 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +  T +LD+ D    K +P  L   G DI+R  A Y    +  L+   
Sbjct: 455 VLDTWMDSSITPMVITKWLDD-DEFFEKHYPVQLRPQGHDIIRTWAFYTIVKSIALTGKK 513

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +    +      F  K+
Sbjct: 514 PWNEIVINGMVFGEDGHKMSKSRGNVVEPDEIITKYGADALRLWASNSVVGDDVQFLWKE 573

Query: 345 G------LKKRVNADLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTES-DESILSVCSR 396
                  L+K  NA           R   M I  D    +  P   +   D  ILS   +
Sbjct: 574 VDYGYRFLRKFWNA----------CRFAKMHISDDIIDELKKPMEISNPIDLWILSKLQK 623

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +++ +  +++N   +  + ++   V     D Y +  K + L   + +      +    V
Sbjct: 624 LIERVDRDLENYRFN-TIVEIYKFVWHEFCDNYIEMVK-YRLYGDDEEAKKEARWTLYYV 681

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           I +L  LL  F P  ++ + +I  + + +  F  +D+R 
Sbjct: 682 IDKLVRLLCPFAPHFSDYMAEIYKIDNLHFSFPEIDERF 720



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG       +     
Sbjct: 42  IDTPPPYPTGRLHLGHALNWTYMDIIARYKRMKGFNVLFPQGWDCHGLPTEVKVEEIHGI 101

Query: 69  TKVFVDQNSRNFRDMA 84
           TK  +D++   FR++ 
Sbjct: 102 TKSDIDRHK--FRELC 115


>gi|262277794|ref|ZP_06055587.1| leucyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224897|gb|EEY75356.1| leucyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 851

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 8/178 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y      YP+ + H+GH     + DV+A + RL G +VL   G D  G     A
Sbjct: 31  KDKPKYYCLEMFPYPSGKIHMGHVRNYTLGDVIANYKRLRGFNVLHPMGWDSFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +   N    +    +L   I +D  I T    ++   +  +  +  KG +
Sbjct: 91  AMQKKLHPKDWTLNNIETMKSQLKLLGFSIDWDREISTCNDDYYKHQQKFFLDLLKKGLV 150

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           YK      W  + +    N+  +    DG+ + +    +Q  +   +FF+++A+ D L
Sbjct: 151 YKKESLVNWDPVDNTVLANEQVI----DGKGWRSGAQVIQ-KKLSQWFFKITAFADDL 203



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/178 (18%), Positives = 86/178 (48%), Gaps = 27/178 (15%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            E +SKS  NV+DP  VI   G DA+R+F++ +    +D  +  +G+         +G  
Sbjct: 613 SESMSKSKKNVVDPQTVINLYGADAVRWFVLSDSPPERDIQWSDEGI---------SGSY 663

Query: 360 NLVSR--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             + +  ++S ++++ +             E ++   +++++EI  N++N   + A+A+ 
Sbjct: 664 KFIQKIWTISEMIQNIEEKNKLNDEEISQSEKLI---NKLVKEITYNIENFHFNVAVAKF 720

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              ++ +            KK + +++  +L+   ++ ++  +L+  F P +A++ ++
Sbjct: 721 YEFLNFLS-----------KKLHENKSEKILF--KKMFKEFLVLIYPFTPHIASECWE 765


>gi|15595083|ref|NP_212872.1| valyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|226321435|ref|ZP_03796962.1| valyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|3915080|sp|O51680|SYV_BORBU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2688666|gb|AAC67078.1| valyl-tRNA synthetase (valS) [Borrelia burgdorferi B31]
 gi|226233231|gb|EEH31983.1| valyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 875

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKSLLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|320547802|ref|ZP_08042086.1| leucine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447562|gb|EFW88321.1| leucine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 833

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 12/179 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ A  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAKNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y+      W      A  N++ +  G    G Y   +    QWM       +++AY ++
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWM------LKITAYAER 202


>gi|218514117|ref|ZP_03510957.1| leucyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 318

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLD 121


>gi|54310010|ref|YP_131030.1| leucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|60390708|sp|Q6LN98|SYL_PHOPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46914449|emb|CAG21228.1| putative leucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 858

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEY 198


>gi|301109721|ref|XP_002903941.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262096944|gb|EEY54996.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1176

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 18/246 (7%)

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
           P  +K+KF   +PAD    G D  R    ++   +LS  L   P  K +  +G +L + G
Sbjct: 551 PFENKSKFEANFPADFVAEGLDQTR--GWFYTLMVLSTALFDTPAFKNLIVNGLVLAEDG 608

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLAN 356
            K+SKSL N  DP E++++ G DALR +L+       +    +     G+ + +     N
Sbjct: 609 RKMSKSLKNFTDPEEILQKYGADALRLYLINSPVVRAEPLKFQAPGVLGVIREIFLPWFN 668

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHR 412
                  ++  + L+     +P   A   S    D  I++    +++ + E M+   ++ 
Sbjct: 669 SARFFAQQATRLQLETGAAFVPDRLAALASTNVMDSWIIAALQNLIKFVHEEMKAYRLYT 728

Query: 413 ALAQVISLVSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            + +++S + ++   Y    +P          A+  L    EV   LA L+  F P    
Sbjct: 729 VVPRLVSFIGQLTNWYVRLNRPRLKGSAGSAEAAVALSALYEVEYNLAKLMAPFTPFFTE 788

Query: 472 KIFDIL 477
            ++  L
Sbjct: 789 YMYQFL 794


>gi|227510587|ref|ZP_03940636.1| leucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190239|gb|EEI70306.1| leucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 811

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + A
Sbjct: 35  KDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMARMQGKNVLHPMGWDAFGLPAEQYA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   + F  QN + F+     L  SY  D  I TT+  ++   + +++++  KG  Y
Sbjct: 95  LKTGHNPRSFTAQNIKTFKRQIRSLGFSYDWDREINTTDPAYYKWTQWIFEQLYKKGLAY 154

Query: 121 K 121
           +
Sbjct: 155 E 155



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFILHKG 300
           D  K K+W P DL+V G +    H +Y   W  FL    + P P   +K+ + G IL   
Sbjct: 521 DPEKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFQKLVNQGMILGTN 580

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNVI+P ++++E G D LR +
Sbjct: 581 HEKMSKSKGNVINPDDIVDEYGADTLRVY 609


>gi|225378201|ref|ZP_03755422.1| hypothetical protein ROSEINA2194_03861 [Roseburia inulinivorans DSM
           16841]
 gi|225210007|gb|EEG92361.1| hypothetical protein ROSEINA2194_03861 [Roseburia inulinivorans DSM
           16841]
          Length = 805

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 9/103 (8%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFIL-HKGEKIS 304
           K+W P D +  G +    H +Y   W  FL    + P P   +K  SHG IL   GEK+S
Sbjct: 529 KYWMPVDWYNGGMEHTTLHLLYSRFWHKFLYDEGVVPCPEPYQKRTSHGMILGENGEKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GNV++P +++ E G D LR + +   A      + +DG+K
Sbjct: 589 KSRGNVVNPDDIVREYGADTLRTYEMFIGAFDLSASWSEDGVK 631



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      A
Sbjct: 32  KPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENYA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K+  ++N   F+D    L  S+  D  I TT+  ++   + ++ K+   G  Y
Sbjct: 92  IKNKIHPKIVTEKNVARFKDQLHSLGYSFDWDREINTTDPNYYKWTQWIFLKLFKAGLAY 151

Query: 121 K 121
           K
Sbjct: 152 K 152


>gi|213609928|ref|ZP_03369754.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 555

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQV---IDGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|325269789|ref|ZP_08136399.1| valyl-tRNA synthetase [Prevotella multiformis DSM 16608]
 gi|324987762|gb|EGC19735.1| valyl-tRNA synthetase [Prevotella multiformis DSM 16608]
          Length = 897

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 30/282 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           M  W  +    ++    +++PD  + + ++P    V G DI+ F    W A ++ A    
Sbjct: 476 MDTWFSSWLWPISVFDGINHPDNEEISYYYPTSDLVTGPDIIFF----WVARMIMAGYEY 531

Query: 284 ---LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++     G D 
Sbjct: 532 RGKFPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDI 590

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N        N +  +  ++          P A   + E   +    V  
Sbjct: 591 LFDETLCEQGRN------FNNKIWNAFRLVQGWQTADTEQPQASRIAVEWFDAKLKAVNA 644

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVI 455
           E+ E  ++  I  AL  V  L      ++D    W L+   P+       T    T+   
Sbjct: 645 EMDEQFRSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDRTTYEATLRFF 698

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-KPG 496
             L  +L  F+P +  +++  L+   +       + RL  PG
Sbjct: 699 NALLKMLHPFMPFITEELWQHLYDRKDGESIMCDELRLPAPG 740


>gi|297624535|ref|YP_003705969.1| isoleucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165715|gb|ADI15426.1| isoleucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 1106

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 120/288 (41%), Gaps = 75/288 (26%)

Query: 79  NFRDMADVLDISYDD---FIRTT---EKRHHDTCRILWKKISDKGDIYKGCYSGW----- 127
           N+R+M DV  I+Y     ++RTT   +K   +  +I W   S    I  G +  W     
Sbjct: 422 NWRNM-DVPLINYAKRSWYLRTTALKDKLLANNDKINWVPDS----IRTGRFGKWLENNV 476

Query: 128 -YSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            ++L  E Y+     +++  DG+               G    L A   + LS  E H  
Sbjct: 477 DWALSRERYWGAPLPIWEAEDGERVCV-----------GSVAELEALTGRDLSGLELHRP 525

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI       + ++F + G        KTF    ++P    Y + VW ++        GYL
Sbjct: 526 FI-------DEVTFERDG--------KTFR---RVP----YTVDVWFESGAMPYAQWGYL 563

Query: 246 DNPDGSKAK-----FWPADLHVIGKDILR--FHAIYWPAFLLS----------------A 282
               G  A+      +PAD      D  R  F++++  A LL+                 
Sbjct: 564 GERSGEAARETLRRHFPADYICEAVDQTRGWFYSLHALATLLTDGGDGVREPGALAWLGP 623

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++P  K V   G IL   GEK+SKS GN++DP  V++ VG DALR++L
Sbjct: 624 DMPAFKNVIVLGHILDENGEKMSKSKGNIVDPWTVLDAVGADALRWYL 671


>gi|149632053|ref|XP_001513511.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Ornithorhynchus anatinus]
          Length = 901

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 77  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDAIARFQKMRGMQVINPMGWDAFGLPAENA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +   N ++ R+  + + +  ++D  I T    ++   + L+ K+ + G  
Sbjct: 137 AIERGLHPENWTQSNIKHMREQLNRIGLCFNWDREITTCLPDYYKWTQYLFIKLYEAGLA 196

Query: 120 YK 121
           Y+
Sbjct: 197 YQ 198



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP EV+E+ G+D +R +++   A  KD  ++   +K      +      
Sbjct: 636 EKMSKSKHNGIDPEEVVEQYGIDTIRLYILFAAAPEKDILWE---MKSDALPGVLRWQQR 692

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES 389
           L S +   I     G +P P   +  +++
Sbjct: 693 LWSLTTKFIEARASGEVPRPHQLSNKEKA 721


>gi|323342891|ref|ZP_08083123.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464003|gb|EFY09197.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 906

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++     +   P        P D++  G D  R  F++    +  L    
Sbjct: 522 IMDVWFDSGSSHTAALNHCKTP-------LPVDVYAEGSDQYRGWFNSSLIISVALYGFA 574

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K+V SHGFI+H  GEK+SKS GN + P  + E +G D LR ++
Sbjct: 575 PY-KQVVSHGFIMHDDGEKMSKSKGNALSPQAITETLGADILRLWV 619



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D++ R   + G    F  G D HG  I  A Q  GV  K    
Sbjct: 58  YANGNIHIGHALNGIQKDLIVRTKFMAGYQTPFRPGWDTHGLPIENAIQKLGVNRKEMPT 117

Query: 75  QNSR----------------NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              R                +F+ +  + D  Y +   T  K    T   ++ +++ KG 
Sbjct: 118 YEFRALCEKYAHEQVAIQMADFKSLGKIGD--YKNPYLTLNKDFEATQIRVFAEMAMKGM 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPVYWSPSSESALAEAEI 198


>gi|227524746|ref|ZP_03954795.1| leucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088100|gb|EEI23412.1| leucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 811

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + A
Sbjct: 35  KDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMARMQGKNVLHPMGWDAFGLPAEQYA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   + F  QN + F+     L  SY  D  I TT+  ++   + +++++  KG  Y
Sbjct: 95  LKTGHNPRSFTAQNIKTFKRQIRSLGFSYDWDREINTTDPAYYKWTQWIFEQLYKKGLAY 154

Query: 121 K 121
           +
Sbjct: 155 E 155



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFILHKG 300
           D  K K+W P DL+V G +    H +Y   W  FL    + P P   +K+ + G IL   
Sbjct: 521 DPEKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFQKLVNQGMILGTN 580

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNVI+P ++++E G D LR +
Sbjct: 581 HEKMSKSKGNVINPDDIVDEYGADTLRVY 609


>gi|223889484|ref|ZP_03624070.1| valyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885170|gb|EEF56274.1| valyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 875

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKSLLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|193215143|ref|YP_001996342.1| leucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|229559917|sp|B3QRU2|SYL_CHLT3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193088620|gb|ACF13895.1| leucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 805

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 13/180 (7%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    H+GH      +D+ AR+ RL G  VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGSGLHVGHLEGYTASDITARYKRLKGFSVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   ++  + N  NF+     +  SYD    I TT+  +    + ++ K+ +KG  Y
Sbjct: 90  IKTGTHPRLTTETNVANFKSTLQRMGFSYDWSREINTTDPGYVKWTQWIFLKLYEKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
                  W         N++   K  DG  Y     P+ QWM       +++AY ++LL+
Sbjct: 150 VDDVPVNWCEELKVVLANEEVDEKVNDG--YTVVRRPLRQWM------LKITAYAERLLT 201



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 55/251 (21%)

Query: 246 DNPDGS----KAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFS 292
           DNP+ +    K K+W   DL++ G +    H +Y   W   L     +S   P  +K+F+
Sbjct: 507 DNPNEAVSPEKEKYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDVGVVSTKEPF-RKLFN 565

Query: 293 HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G IL +  EK+SKS GNVI    V+   G DA+R +   E+  G           ++V 
Sbjct: 566 QGMILGEDNEKMSKSRGNVITADSVMSGYGADAVRLY---EMFLGP---------LEQVK 613

Query: 352 ADLANGIGNLVSRSVSMILK-----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
               NGI   +SR +  + +     + DG +          E++L    + ++++ E+ +
Sbjct: 614 PWSTNGIEG-ISRFLGKVWRLVYPNEADGTVQVTD--DAPSETVLRRMHKTIKKVGEDTE 670

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A+++++  V+E+ +                R+ T        I  L ++L  F 
Sbjct: 671 TLKFNTAISEMMIYVNELQK-------------EKCRSRT-------AIENLLLMLSPFA 710

Query: 467 PKLANKIFDIL 477
           P +  +++  L
Sbjct: 711 PHICEELWQAL 721


>gi|123477120|ref|XP_001321729.1| Valyl tRNA Synthetase [Trichomonas vaginalis G3]
 gi|121904561|gb|EAY09506.1| Valyl tRNA Synthetase, putative [Trichomonas vaginalis G3]
          Length = 756

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 16/196 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +  G+  N +    +++P  +   G DIL F    W +
Sbjct: 523 VTVEQDPD-VLDTWFSSALLPFSGVGWPSNEERLN-RYFPNSILETGWDILTF----WVS 576

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  +L L  KV  H  +LH      +G K+SKSLGNVIDP  VI  + ++ L   +  
Sbjct: 577 RMVMMSLTLTNKVPFHTILLHPLVRDAQGRKMSKSLGNVIDPRHVINGIELEDLVAEIEN 636

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                K+     DG K    AD  NGI    + ++ + L  + G   T         S  
Sbjct: 637 STFDDKEKKIAIDGRK----ADFPNGIPQCGTDAMRLALCSFAGANRTANLNVSVIVSYR 692

Query: 392 SVCSRVLQEIRENMQN 407
           + C+++   +R  + N
Sbjct: 693 NFCNKMWNAVRFALPN 708


>gi|56752183|ref|YP_172884.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|60390662|sp|Q5N006|SYL_SYNP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56687142|dbj|BAD80364.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 865

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+   H+GH     I D +AR  R  G  VL   G D  G     AA
Sbjct: 47  DRPKFYALSMFPYPSGNLHMGHVRNYTITDAIARVKRRQGFRVLHAMGWDAFGLPAENAA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            + GV    +  QN    R+    L +SYD
Sbjct: 107 IDRGVQPADWTYQNVAQMREQLKQLGLSYD 136


>gi|86152674|ref|ZP_01070879.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613441|ref|YP_001000769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166231595|sp|A1W078|SYL_CAMJJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85843559|gb|EAQ60769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249151|gb|EAQ72112.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 809

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H   Q  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVAQ-KKMPGYYVKITAY 196



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P   ++ + G +L  
Sbjct: 518 DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPF-DRLLTQGMVLKD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 577 GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 624


>gi|325135101|gb|EGC57728.1| valyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 945

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|325295230|ref|YP_004281744.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065678|gb|ADY73685.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 912

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+     YP+ + H+GH     I DV+ARF ++ G +V+   G D  G     AA 
Sbjct: 29  KEKYYVLEMFPYPSGRIHMGHVRNYSIGDVIARFKKMFGYNVIHPMGWDSFGLPAENAAI 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            +GV  + +   N    ++    L  SYD
Sbjct: 89  KSGVHPREWTLSNIEYMKNELKKLGFSYD 117



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 30/180 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E+IE+ G DA R +++       +  +  +G++         G    
Sbjct: 673 KMSKSKLNVVDPDEMIEKYGADATRLYVLFAAPPESEFEWKTEGIE---------GAYRF 723

Query: 362 VSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
           + R    ++++ D    G+    G  +++ + +     + LQ++ E +Q +   + A+A 
Sbjct: 724 LRRVFQFVVENKDFFNQGL---KGEVSKAGKELRRKVHQTLQKVTEELQERFKFNTAIAS 780

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L +E+ R+          K   D    VL    E I +L I+L  F P ++ ++++I
Sbjct: 781 IMELFNEITRF----------KVKSDGDKEVLK---EAIEKLIIMLSPFTPHISEEMWEI 827


>gi|323142861|ref|ZP_08077573.1| leucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417403|gb|EFY08025.1| leucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 863

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y      YP+ + H+GH     I DV+AR++RL G +V+   G D  G     A
Sbjct: 33  KNKEKYYCLVMFPYPSGRLHMGHVRNYTIGDVIARYNRLLGKNVMAPIGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    +     L ++Y  D  + T    ++   +  + ++  +G +
Sbjct: 93  AIKNHAQPSDWTYSNIEYMKRQLKALGLAYDWDREVATCRPEYYKWEQKFFGELYKRGLV 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D     +++V    DG+ +    + V+  E   ++ +++AY ++LL
Sbjct: 153 YKKVSTVNWCPHDNTVLANEQV---VDGRCWRCD-SKVELREIPQWYLKITAYAEELL 206


>gi|307109913|gb|EFN58150.1| hypothetical protein CHLNCDRAFT_141931 [Chlorella variabilis]
          Length = 1150

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 20/130 (15%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKS 306
           A+F+P  L   G DIL F    W A ++   + L      K+VF H  +    G K+SKS
Sbjct: 686 ARFYPTSLLETGHDILFF----WVARMVMMGMKLTGEVPFKQVFLHSLVRDAHGRKMSKS 741

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN---ADLANGIGNLVS 363
           LGNVIDPI VIE + +D L   L+        G  D   ++K  +   AD  +GI    +
Sbjct: 742 LGNVIDPINVIEGITLDGLHQTLL-------GGNLDPKEVEKAASGQRADFPDGIEECGT 794

Query: 364 RSVSMILKDY 373
            ++   L  Y
Sbjct: 795 DALRFALVAY 804


>gi|304388975|ref|ZP_07371022.1| valine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337109|gb|EFM03296.1| valine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 945

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|325143264|gb|EGC65603.1| valyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197461|gb|ADY92917.1| valyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 945

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|311030540|ref|ZP_07708630.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 1029

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++ VW D+ +       Y  +N D  + +F PAD+   G D  R  F+++   + L +  
Sbjct: 512 VIDVWFDSGSMPFAQHHYPFENKDKFEQQF-PADVICEGIDQTRGWFYSLLAVSTLFTGK 570

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +P  K+V S G IL  +G K+SKS GN ++P++++++ G DA R+ L+ + A   +  + 
Sbjct: 571 VPY-KRVLSTGHILDEEGRKMSKSKGNALNPMDLVDKFGADAFRWALLADSAPWNNKRFS 629

Query: 343 KDGL---KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
           +  +   K +V   L N  G     ++   +  Y       G  T  D  +L+    V  
Sbjct: 630 ERVVIEAKSKVIDTLVNMHGFY---TLYANIDGYQFNETETGEKTLLDRWVLARLYSVTA 686

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + E ++     +A   + + V E+  ++      + W+   T   +A+   Y   +V+ 
Sbjct: 687 IVSEALEEYDFTKAAKALETYVDEISNWYIRRSRDRFWKEGMTENKKAA--YYTLHQVLV 744

Query: 457 QLAILLQAFVPKLANKI 473
           + + LL  ++P LA  I
Sbjct: 745 RTSQLLAPYIPFLAEDI 761


>gi|203288260|ref|YP_002223275.1| isoleucyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|259511497|sp|B5RQH0|SYI_BORRA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|201085480|gb|ACH95054.1| isoleucyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 1044

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 14/204 (6%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDG 345
           K V  +G +L   G+K+SKSL N  DPI++I   G DALR +L+       D   Y  DG
Sbjct: 579 KNVIVNGLVLSSDGKKMSKSLKNYTDPIQIINTFGADALRLYLIMSPVIKADDLKYSDDG 638

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVCSRVLQ 399
           +K  V  ++   I N  S  ++  + D      TP  +         D+ I+S    + Q
Sbjct: 639 VKD-VLKNIIIPIWNAYSFFITYAIIDK----FTPNNYVNLYKTNILDKWIISEIESLKQ 693

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQL 458
            + E +    + +++  +++ + +++ ++  +      K+  D      Y T+   ++ L
Sbjct: 694 ILNEEIDKYNLTKSIEVLLTFIDKLNNWYIRRSRRRFWKSENDNDKIDAYETLYYTLKNL 753

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
            ++L  F+P L  +I+  L   +E
Sbjct: 754 MLMLAPFIPFLTEEIYQNLKTKNE 777


>gi|227513601|ref|ZP_03943650.1| leucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083117|gb|EEI18429.1| leucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 811

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + A
Sbjct: 35  KDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMARMQGKNVLHPMGWDAFGLPAEQYA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   + F  QN + F+     L  SY  D  I TT+  ++   + +++++  KG  Y
Sbjct: 95  LKTGHNPRSFTAQNIKTFKRQIRSLGFSYDWDREINTTDPAYYKWTQWIFEQLYKKGLAY 154

Query: 121 K 121
           +
Sbjct: 155 E 155



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFILHKG 300
           D  K K+W P DL+V G +    H +Y   W  FL    + P P   +K+ + G IL   
Sbjct: 521 DPEKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFQKLVNQGMILGTN 580

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNVI+P ++++E G D LR +
Sbjct: 581 HEKMSKSKGNVINPDDIVDEYGADTLRVY 609


>gi|167044058|gb|ABZ08743.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG4H17]
          Length = 951

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/228 (20%), Positives = 105/228 (46%), Gaps = 27/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS--ANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           F+P D    G+D++  H  +   F+L+  A  P    P+++  +G +L  G+K+SKS+GN
Sbjct: 570 FYPVDSRHSGRDLVPNHLTF---FVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGN 626

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +I   E + + G D +R  ++      +D  ++ + +K      + N + ++        
Sbjct: 627 IIPLREAVRKYGADPIRLTILISAELLQDADFNVEAIK-----GIKNKLASMYEDCTKTK 681

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            + +  + P         ++++   S+ + EIR       +  AL  ++         FD
Sbjct: 682 AEKFPELEPEDKWIHGRLQNLVLNASQSIDEIR-------LREALHHILF-------DFD 727

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++  W LK+T   + + +  +  +++    ++L  F P +A ++++ L
Sbjct: 728 SELQWYLKRTKSKQRTNISGILHKILSYRVLMLSPFAPHIAEEMWEKL 775



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK +I+ A  YPN+  HIGH     I DV +R+ R+ G +VLF  G    G  I   ++
Sbjct: 29  KEKKFITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGFNVLFPMGFHYTGTPILGMSK 88

Query: 64  --NAGVTTKVFVDQNSRNFRDMA 84
              AG T  +   +N  N  D A
Sbjct: 89  RVEAGDTEIIDGLKNIYNVPDEA 111


>gi|90414087|ref|ZP_01222070.1| leucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90324882|gb|EAS41410.1| leucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 858

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEY 198


>gi|85000765|ref|XP_955101.1| leucyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303247|emb|CAI75625.1| leucyl-tRNA synthetase, putative [Theileria annulata]
          Length = 925

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + +K YI + I Y + +  H+GH     + DV+AR+ RL G +VL   G D  G    
Sbjct: 165 MDKDKKYYILSMIPYVSGKGLHVGHLLGYTVVDVIARYKRLKGFNVLNPMGYDSFGIPTQ 224

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             ++   +T +  V+QN  NFR     +  S+D
Sbjct: 225 LYSKKHNLTPEEAVEQNVNNFRQQLKAMGYSFD 257



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 41/180 (22%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLA 355
           K+SKS GNV  P E+I+  G D+LR  L+ +    KD  +    ++      K +NA + 
Sbjct: 743 KMSKSRGNVASPEEIIKRFGADSLRLHLLFQGPVDKDRIWSIQSIQGPYKLLKSINAFVT 802

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N        S S      +  I         D +++   +  +  +  NM+N  +++   
Sbjct: 803 NFFKQNSIESTS------NNTI---------DPTVIPKLNEFINTMTYNMENFKLNK--- 844

Query: 416 QVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                VSE  ++F   K W E KK +P            V+    I+L  F P L+  ++
Sbjct: 845 -----VSEFFKFFTLMKLWDEEKKLSP-----------RVVETFLIILSPFAPHLSEHLW 888


>gi|312115573|ref|YP_004013169.1| leucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220702|gb|ADP72070.1| leucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 870

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 4/123 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     A
Sbjct: 31  RSRPKYYVLEMFPYPSGRIHVGHVRNYTMGDVVARYKRARGFNVLHPFGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G+  + +  +N    R     + +S D   +F     + +H   RI      +KG 
Sbjct: 91  AIQKGINPREWTYENIEAMRTQLKRIGLSLDWTREFATCDPEYYHQQQRIFL-AFREKGL 149

Query: 119 IYK 121
           +Y+
Sbjct: 150 VYR 152


>gi|225621162|ref|YP_002722420.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782486|sp|C0QWR3|SYL_BRAHW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225215982|gb|ACN84716.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 853

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     IAD +AR+++L G D+L   G D  G     AA  
Sbjct: 31  KKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYKLLGYDILHPMGWDAFGMPAENAAIE 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
                  +  +N  N +D  ++L  SYD
Sbjct: 91  HKTHPAEWTLKNIANMKDQLNLLGYSYD 118



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 29/189 (15%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           I+ K EK+SKS  N IDP E+IE  G DA+R F++      KD  +  +G+K        
Sbjct: 603 IIVKMEKMSKSKANGIDPAEIIELFGADAVRIFVMFVAPPEKDKEWSDEGVK-------- 654

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQNQL 409
            G    ++R  ++ LK  D      G        ++  + +    ++ ++++  +++++ 
Sbjct: 655 -GSSRFLNRIWNLFLKYKDEEAFKNGKSFDYNNLSKEGQKLFRKYNKTIKKVTIDIKDRF 713

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A ++ L++++           +K  N D  +    +  EVIR   ILL    P 
Sbjct: 714 HFNTAIAALMELLNDMSV---------IKLANNDDYA----MFKEVIRGYLILLNPIAPH 760

Query: 469 LANKIFDIL 477
           +  +++ IL
Sbjct: 761 MTEELYQIL 769


>gi|212550602|ref|YP_002308919.1| isoleucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548840|dbj|BAG83508.1| isoleucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 1131

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 19/233 (8%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  + ++  ++   + V S G +L K G K+SK LGN I
Sbjct: 631 FFPADFISEGTDQTRGWFFTLHAISVMVKDSVAF-RNVISSGLVLDKNGNKMSKRLGNTI 689

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I   G D LR++++       +  ++  G+++ V     + + N  S        
Sbjct: 690 DPFEIIATYGSDPLRWYMITNSLPWDNLKFNTKGIEE-VRRKFFDTLHNTYSFFALYANV 748

Query: 372 D----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR 426
           D    +   IP      E D  ILS+ + +++E+ E +       A   + + V++ +  
Sbjct: 749 DNFNYWKSEIPLEKR-PEIDRWILSLLNSLIKEVDEQLSTYEPTHAARSIKNFVNDNLSN 807

Query: 427 YF---DAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++   + ++ W+  K + D+ S    LY+ ++ I Q   L+    P  A+K++
Sbjct: 808 WYVRLNRKRFWKSGKLDTDKLSAYQTLYICLKTISQ---LISPIAPFYADKLY 857


>gi|118595199|ref|ZP_01552546.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440977|gb|EAV47604.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 810

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYALCMFPYPSGKLHMGHVRNYAIGDVISRFKRLRGFNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    R+    L ++ D    I T +  ++   + L+ ++  KG +YK
Sbjct: 92  KNNTAPDKWTYANISEMRNQLKQLGLAVDWSREIATCDSSYYKWEQWLFIQLFKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D+    +++V    DG+ + +    V+  E   YF +++ Y + LL
Sbjct: 152 KTSMVNWDPVDKTVLANEQVI---DGRGWRSGE-IVERKEIPQYFMKITDYAEDLL 203



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L++   P  KK+ + G +L  G K
Sbjct: 514 RANYWLPVDYYIGGIEHAILHLLYARFFNRLLYDLKLINTKEPF-KKLLTQGMVLKDGAK 572

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP ++I++ G D  R F++
Sbjct: 573 MSKSKGNTVDPQDLIDKYGADTARLFIM 600


>gi|325129093|gb|EGC51942.1| valyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 945

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|59711360|ref|YP_204136.1| leucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81310994|sp|Q5E6U8|SYL_VIBF1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|59479461|gb|AAW85248.1| leucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 858

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEY 198


>gi|330836390|ref|YP_004411031.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748293|gb|AEC01649.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 879

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 80/387 (20%), Positives = 154/387 (39%), Gaps = 58/387 (14%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G  Y   H  ++    + +F ++     K L   + +     P    N    ++++ ++D
Sbjct: 341 GHCYRC-HTVIEPYLSDQWFVKMKGLAKKALGALKRNDIVFYPRRWENTYCHWLET-IRD 398

Query: 207 LSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDALTNY 238
             +SR+ + WG +IP              +DP                ++  W  +    
Sbjct: 399 WCISRQLW-WGHRIPVWYCKDCGKVIVSREDPSCCPKCHKTNLLQDNDVLDTWFSSWLWP 457

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            +T G+ D        F+P    V   DI+ F    W + ++ ++     KV     ++ 
Sbjct: 458 FSTLGWPDKT-ADLDNFFPTSTLVSAYDIIFF----WISRMIMSSKEFLGKVPFRDIVIT 512

Query: 299 ------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 KG K++KSLGN IDP E+I++ G DA+++ L      G+D   +K+     + +
Sbjct: 513 GLVRDIKGRKMAKSLGNGIDPNEIIDQYGADAMKFTLCYVTTLGQDLLIEKNLFN--LGS 570

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              N I N  +R + + L+  +        ++  D  I    +   Q+I  +++N     
Sbjct: 571 RFTNKIWN-AARFLLLNLEGRNIRTIDESEYSIMDRWIYGRFNYACQKISYSIENYKFSD 629

Query: 413 ALAQVISLVSE--VDRYFDA--QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP- 467
           A   + S       D Y ++  QK     K   D+A ++L   +E   +L     +F+  
Sbjct: 630 AAQCIYSFFWNDFCDWYIESSKQKLLHGTKEEKDKAISILMDMLEASMRLMHPFLSFITE 689

Query: 468 ----KLANKIFDILF----VADENRCF 486
               KL N + D++     + D+ RC+
Sbjct: 690 EIYQKLPNHMGDVIVAQYPIFDKTRCY 716



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAG---------- 66
           H+GHA    + DV+ R+HR+ G+ VL+  GTD  G      + +   N G          
Sbjct: 49  HMGHALNNSLQDVIVRYHRMKGMAVLWLPGTDHAGIATQNVVERQLNNEGLGRHDIGREK 108

Query: 67  -VTTKVFVDQNSRN-----FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +     V +N  N        M    D  ++ F  T ++      R  +  + +KG IY
Sbjct: 109 FLERTWLVKENHHNIIKSQLEKMGCSCDWEHERF--TMDEGASRAVREAFVTLYEKGLIY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           KG Y   Y  +     +DDEV Y    G+ Y+ ++
Sbjct: 167 KGKYLVNYCYKCGTALSDDEVEYDSIQGKLYHVRY 201


>gi|317179745|dbj|BAJ57533.1| leucyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 806

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 283 NLPLP-KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           NL  P K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 552 NLDEPFKQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLK 347
           + + L+
Sbjct: 612 NDNALE 617


>gi|317178266|dbj|BAJ56055.1| leucyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 806

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|312978116|ref|ZP_07789861.1| leucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895091|gb|EFQ44160.1| leucine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 804

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P EVI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+ ++   + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFESLHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRKNMRQWM------LKMTAY 196


>gi|282891368|ref|ZP_06299870.1| hypothetical protein pah_c050o175 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498865|gb|EFB41182.1| hypothetical protein pah_c050o175 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 856

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D+LAR+ R  G +VL   G D  G    +
Sbjct: 33  RAKPKYYVLDMFPYPSGSGLHVGHPEGYTATDILARYKRQKGFNVLHPMGWDNFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V   +N  NF+     L  SY  D  I T++  ++   + ++ K+ +KG 
Sbjct: 93  YAIRTGTHPAVTTKKNVENFKRQLQSLGFSYDWDREISTSDPSYYKWTQWIFTKLYEKGL 152

Query: 119 IYKG 122
            Y+ 
Sbjct: 153 AYEA 156



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 37/181 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P E+IEE G D+LR +         + F      +K  N D  +G   
Sbjct: 632 EKMSKSKLNGVSPDEIIEEFGADSLRLY---------EMFMGPLEKEKVWNTDAVSGCRR 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   + +        +P    E+    L +  R+++ + E++     + A+A+++  
Sbjct: 683 FLARFYDLAV--------SPKLTQETTVEALKLGHRLVKGVEEDIVAMQFNTAIAKMMEF 734

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +++  +            T P            V++  A  L  F P LA +I++IL + 
Sbjct: 735 INDFSKL----------DTYP----------ASVLKMAAQALYPFAPHLAEEIWEILGIK 774

Query: 481 D 481
           +
Sbjct: 775 E 775


>gi|255536397|ref|YP_003096768.1| Valyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342593|gb|ACU08706.1| Valyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 882

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 21/240 (8%)

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL 297
           G LD  +     ++P    V G DI+ F    W A ++ A L     +P K V+  G + 
Sbjct: 483 GMLDPENKDINYYYPTSDLVTGPDIIFF----WVARMIMAGLEYRKEVPFKNVYFTGIVR 538

Query: 298 HKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K   K+SKSLGN  DPIE++E+ G D +R  ++   A G D  +D++ + +  N   A 
Sbjct: 539 DKQRRKMSKSLGNSPDPIELMEKYGADGVRVGILLSSAAGNDLLFDEELMLQGRN--FAT 596

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N       M   + +  I    A  ++ E       + + EI +      I  AL  
Sbjct: 597 KIWNAYRL---MQGWEKNEAIKATAADNQAIEWFGHQMDKTIAEIADQFAKFRISDALHL 653

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  L+ +     Y +A KP          ++ V   ++E   +L  LL  F+P L+ +++
Sbjct: 654 VYKLIWDDFCSWYLEAVKP----AFGEPVSAEVYGKSIEYFEELMKLLHPFMPFLSEELW 709


>gi|255531150|ref|YP_003091522.1| valyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344134|gb|ACU03460.1| valyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 887

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 36/274 (13%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
           I  DP  +M  W  +    ++      NPD     ++ P +  V   +IL F    W A 
Sbjct: 460 IKQDPD-VMDTWFSSWLWPISVFDGFKNPDNKDINYYYPTNDLVTAPEILFF----WVAR 514

Query: 279 LLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++ A      +     V+  G +  K G K+SKSLGN  DPI +IE+ G D +R  ++  
Sbjct: 515 MIMAGHEFRGQKPFTNVYLTGIVRDKLGRKMSKSLGNSPDPIGLIEKYGADGVRVGMLLC 574

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G D  +D+   ++  N   AN I N          +   G    P     + ++IL 
Sbjct: 575 SPAGNDLMFDESYCEQGRN--FANKIWN--------AFRLVKGWEVEPALENPNQQAILW 624

Query: 393 VCSR---VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-- 447
             +R    L EI +N +   +  AL     LV      +D    W L+   P     V  
Sbjct: 625 FENRFNEALAEIEDNFKQYRLSEALMATYKLV------WDDFCAWYLEMVKPAYQHPVDA 678

Query: 448 --LYVTVEVIRQLAILLQAFVPKLANKIF-DILF 478
             L  T+    ++  LL  F+P +  +++ D LF
Sbjct: 679 ETLKATIAFFEKILTLLHPFMPFITEELWHDELF 712


>gi|124028274|ref|YP_001013594.1| isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978968|gb|ABM81249.1| Isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 989

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 27/201 (13%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           ++V   G +L K G+K+SKS GNVI  +E +E+ G D +R FL+         F D D +
Sbjct: 590 REVLLQGHVLDKYGKKMSKSKGNVIWALEWMEKNGTDPMRIFLLSRAPWDSINF-DPDEV 648

Query: 347 KKRVNADLANGIGNLVSRSVS-----MILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           ++        G  N++  +V      M L  +    P        D  IL    + L++ 
Sbjct: 649 RR------YQGYLNILWNTVKFADTYMELDKWKPKNPAEARLAVEDRWILYRLWQALEKA 702

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRA--STVLYVTVEVI 455
            E +++  +H+A+  ++ LV E    RY    +P  WE + T    A  +T+ YV   V+
Sbjct: 703 SEAIESDNMHQAVQALVDLVVEQVSHRYIPLIRPRVWEEEMTESKDAAYATLYYVLRAVL 762

Query: 456 RQLA--------ILLQAFVPK 468
             +A         L QAFV K
Sbjct: 763 AAMAPIAPFVTEYLYQAFVRK 783


>gi|118602065|ref|YP_903280.1| leucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231641|sp|A1AV52|SYL_RUTMC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118567004|gb|ABL01809.1| leucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 816

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 14/150 (9%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKS GN +DP ++IE+ G D +R F++      ++  +   GL+
Sbjct: 560 KNLLTQGMVLKDGAKMSKSKGNTVDPAQMIEKYGADTVRLFILFAAPPTQNLEWSDSGLE 619

Query: 348 KRVNADLANGIGNLVSRSVSMIL---KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRE 403
                    G+   +++   +I+   +D+    I T   F ++ + I     + L +I +
Sbjct: 620 ---------GVHRFINKVYRLIMDFIQDHKSHAIGTLNNFDKAQKDIRLKTHQTLSKITD 670

Query: 404 NMQNQ-LIHRALAQVISLVSEVDRYFDAQK 432
           NM  + L +  +A ++ L + + ++ D  K
Sbjct: 671 NMSRRYLFNTVIAALMKLCNTLSKFNDTSK 700



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 6/176 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     I DV++R+ ++ G +V+   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGSLHMGHVRNYSIGDVISRYQKMQGKNVMQPIGWDGFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V+   +  +N    RD    L   YD    I T  ++++   + L+ K+ +K  +YK
Sbjct: 92  ENKVSPAKWTYENIDYMRDQLSKLGFGYDWSREIATCHQKYYRWEQWLFIKLFEKDLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +   D+    +++V  G  G   NA    ++  +   +F R++ Y D+L+
Sbjct: 152 KNAIVNWDPVDQTVLANEQVIDGR-GWRSNAL---IEKKKISQWFMRITNYADELI 203


>gi|83309933|ref|YP_420197.1| isoleucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82944774|dbj|BAE49638.1| Isoleucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 663

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +       + P  S    WPA L++ G D  R  FH+    +       
Sbjct: 268 ILDVWFDSGCTHAFVLEGEEWPRLS----WPASLYLEGSDQHRGWFHSSLLESCGTRGRA 323

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF+L + G K+SKSLGNV+ P EV+  +G D LR ++V
Sbjct: 324 PY-DAVLTHGFVLDEDGRKMSKSLGNVVAPQEVVGTMGADILRLWVV 369


>gi|197106622|ref|YP_002131999.1| isoleucyl-tRNA synthetase protein [Phenylobacterium zucineum HLK1]
 gi|196480042|gb|ACG79570.1| isoleucyl-tRNA synthetase protein [Phenylobacterium zucineum HLK1]
          Length = 974

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 16/146 (10%)

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDW-GIKIPD---DPQYIMYVWIDALTNYLTTTGYL 245
           ++RR  +I  +++   D   +R   D+ G   PD     + I+ VW D+ + +  T   L
Sbjct: 532 VDRR--IIEAIRAEGADAWFNRPATDFLGSHDPDRYEKVEDILDVWFDSGSTHAFT---L 586

Query: 246 DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           +N   ++   WPADL++ G D  R  F +    +       P    + +HGF++ + GEK
Sbjct: 587 ENRANTR---WPADLYLEGSDQHRGWFQSSLLESSGTRGRAPY-DSILTHGFVMDEHGEK 642

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GNV+DP  VI E G + +R +
Sbjct: 643 MSKSKGNVVDPERVIGESGAEIIRLW 668


>gi|189501861|ref|YP_001957578.1| isoleucyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497302|gb|ACE05849.1| hypothetical protein Aasi_0436 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 1108

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD    G D  R  F  ++  A +L  ++   K V S+G IL K G K+SK LGN IDP
Sbjct: 603 PADFIAEGVDQTRGWFFTLHAIAVMLFDSVAF-KNVVSNGLILDKIGNKMSKRLGNSIDP 661

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            +++++ G DALR++++       +  +D +GL
Sbjct: 662 FQIMQQHGPDALRWYMISNANPWDNLKFDTEGL 694


>gi|54020648|ref|YP_116175.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987821|gb|AAV28022.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 755

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 19/130 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK-GEKIS 304
           K+ P DL++ G++    H IY   W   L  A + +P     +K+   G +L   G+K+S
Sbjct: 472 KWLPVDLYIGGQEHAVGHLIYSRFWHKVLFDAGI-VPNSEPFQKIIHQGMLLGSDGQKMS 530

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I+P E+I++ G D +R FL+     G    +D++G+           I N + R
Sbjct: 531 KSKGNTINPTEMIDKFGADTIRIFLMFMGPIGDLRLWDENGVV---------SIFNWIQR 581

Query: 365 SVSMILKDYD 374
               IL +Y+
Sbjct: 582 VQRTILANYE 591



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 15 YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
          YP+A   H+GH      +D++ARF RL+G DVL   G D  G    + A   G     F 
Sbjct: 4  YPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQYAIKTGNHPGEFT 63

Query: 74 DQNSRNFRDMADVLDISYD 92
           +N  NF+        SYD
Sbjct: 64 KRNIENFKKQIISFGFSYD 82


>gi|318042707|ref|ZP_07974663.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 977

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 14/115 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           M VW D+ +++    G +   +    +  +PADL++ G D  R  F +    +  ++ + 
Sbjct: 557 MDVWFDSGSSWAGVLGGIAGGESRAPELHYPADLYLEGSDQHRGWFQSSLLTSVAVNGHA 616

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
           P  K+V +HGF L  KG K+SKSLGNV+DP  ++E           G D LR ++
Sbjct: 617 PY-KRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKNEKQEPAYGADVLRLWV 670


>gi|302803323|ref|XP_002983415.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
 gi|300149100|gb|EFJ15757.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
          Length = 1155

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 22/115 (19%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ T++ +  G          K WPAD+++ G D  R  F +    +       P
Sbjct: 721 MDVWFDSGTSWASVLG---------TKRWPADVYLEGSDQHRGWFQSSLLTSVATRGVAP 771

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             ++V +HGF+L  K  K+SKSLGNV+DP  VIE           G D LR ++ 
Sbjct: 772 Y-RQVLTHGFVLDEKNVKMSKSLGNVVDPRSVIEGGKNQKEQPAYGADVLRLWVA 825



 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   I+ D + R+  L G  + +  G D HG  I
Sbjct: 204 YANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWDCHGLPI 247


>gi|221199257|ref|ZP_03572301.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205841|ref|ZP_03578856.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174679|gb|EEE07111.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180542|gb|EEE12945.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 945

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 26/259 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAQHAVPL-DEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-VTVEVI 455
             +    H  +A++ +  SE     Y D  K   L  + PD      A T LY +T  ++
Sbjct: 722 YYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTALYHLTQGLL 780

Query: 456 RQLAILLQAFVPKLANKIF 474
           R LA  L +F  + A K+F
Sbjct: 781 RVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|213401899|ref|XP_002171722.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999769|gb|EEB05429.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 982

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 18/98 (18%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSL 307
           F+P  L   G DIL F    W A +      L+  +P  K+VF H  +   +G K+SKSL
Sbjct: 606 FYPGTLMETGWDILFF----WIARMVMLGIKLTGQIPF-KRVFCHALVRDAQGRKMSKSL 660

Query: 308 GNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
           GNV+DPI+VIE + ++AL   L+      RE+   K G
Sbjct: 661 GNVVDPIDVIEGITLEALHQKLMSGNLDPREVEKAKKG 698



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 20/100 (20%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+  K  I++         HIGHA  + I D LAR++R+ G  VLF  G D        
Sbjct: 129 IKKAGKFVITSPPPNVTGALHIGHALTIAIQDSLARWNRMKGKTVLFLGGFD-------- 180

Query: 61  AAQNAGVTTKVFVD----QNSRNFRDMADVLDISYDDFIR 96
              +AG++T+  V+    Q  +  R      D S +DF++
Sbjct: 181 ---HAGLSTQSVVEKKLWQEKKQTRH-----DYSREDFLK 212


>gi|167627979|ref|YP_001678479.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189030251|sp|B0U0E8|SYL_FRAP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167597980|gb|ABZ87978.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 813

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 14/182 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     A
Sbjct: 29  KNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A     +   +   N    R   D L  S+D    + T ++ ++   +  + ++  KG  
Sbjct: 89  AIKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREVATCDESYYKWEQWFFIQLYKKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y K     W  + D+    +++V  G     G     +  P QW      F +++ Y D+
Sbjct: 149 YRKNSVVNWDPV-DQTVLANEQVVDGRGWRSGALIEKKEIP-QW------FLKITDYADE 200

Query: 176 LL 177
           LL
Sbjct: 201 LL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVTSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN +DP E+I++ G D +R F
Sbjct: 576 MSKSKGNTVDPQELIDKYGADTVRLF 601


>gi|311693403|gb|ADP96276.1| isoleucyl-tRNA synthetase [marine bacterium HP15]
          Length = 939

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  ++   P  ++V +HGF +  KG K+SKSLGNVI P
Sbjct: 558 PADMYLEGSDQHRGWFQSSLKTSIAMNGVAPY-RQVLTHGFTVDGKGHKMSKSLGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLV 330
            EV+ E+G D LR ++ 
Sbjct: 617 QEVMNELGADILRLWVA 633



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           REK  +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I  K  
Sbjct: 48  REKFILHDGPPYANGSIHIGHAVNKILKDMIVKSRSFMGYDAPYVPGWDCHGLPIEHKVE 107

Query: 63  QNAGVTTKVFVDQNSRNFR 81
           Q  G   K  V  + + FR
Sbjct: 108 QEIG---KAGVKVDYKTFR 123


>gi|303257732|ref|ZP_07343744.1| isoleucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859702|gb|EFL82781.1| isoleucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 966

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 13/128 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+ T ++T         GS A    +PADL++ G D  R  FH+       +    P
Sbjct: 574 VWFDSGTTHMTVM------RGSHADKLTYPADLYLEGSDQHRGWFHSSLLTGCAIDGRAP 627

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + +HGF +  +G K+SKSLGNVI P E+ ++ G + LR ++      G+    +K 
Sbjct: 628 Y-KGLLTHGFTVDEQGRKMSKSLGNVIAPSEINDKYGAEILRLWVASSDYTGEISLGEKI 686

Query: 345 GLKKRVNA 352
            LK  V+A
Sbjct: 687 -LKGTVDA 693



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   I+ D++ +   L+G D  +  G D HG  I
Sbjct: 80  YANGNIHVGHAVNKILKDIILKSRTLEGFDAPYVPGWDCHGMPI 123


>gi|260459773|ref|ZP_05808027.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034575|gb|EEW35832.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 927

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     K  ++  D+ V G D++ F    W A ++   L  
Sbjct: 495 VLDTWFSSALWPFSTLGWPDQTPELKT-YYQTDVLVTGFDLIFF----WVARMMMMGLHF 549

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     V+ H  +  K G+K+SKS GNV+DP+++I+E G DALR+ L    A G+D
Sbjct: 550 MDEEPFHTVYMHALVRDKNGQKMSKSKGNVVDPLDLIDEYGADALRFTLAVMAAQGRD 607


>gi|227486701|ref|ZP_03917017.1| leucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235289|gb|EEI85304.1| leucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 800

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++T G D  G      A
Sbjct: 31  KKKFYPLVEFPYPSGQGLHVGHPRPYTAIDVVARKRRLEGENVMYTMGWDAFGLPAENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +   +  ++N  +FR   + +  S+  D  I TT+  ++   + ++ ++   G  Y
Sbjct: 91  IANKIHPAIITEKNIDHFRGQMESIGFSFDWDREINTTDPEYYKWTQWIFLQMYKMGLAY 150

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           K       C S    L +E   +      GAD ++        QWM       +++AY D
Sbjct: 151 KSETSVNWCPSCLVGLANEEVVDGKCERCGADVEHKLKN----QWM------LKITAYAD 200

Query: 175 KLL 177
           +L+
Sbjct: 201 RLI 203



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 25/176 (14%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHK-GEKISKSLG 308
           P D +  G +    H +Y   W   L    +   K+ +    SHG IL   G+K+SKS G
Sbjct: 526 PVDWYNGGMEHTTLHLLYSRFWHKVLYDIGVVPTKEPYMKRTSHGMILGPDGQKMSKSRG 585

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVI+P ++I + G D LR + +          +  +G+K         G    + R  ++
Sbjct: 586 NVINPDDIIRDFGADTLRTYEMFMGDFSSVAKWSDEGVK---------GCRKYLERVYNL 636

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +    DG         E  + +  + ++ ++++ E+ +N   + A+AQ+++L +E+
Sbjct: 637 LDLVVDG--------DEYSKELEILTNQTIKKVGEDYENLKFNTAIAQLMTLSNEM 684


>gi|224824629|ref|ZP_03697736.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603122|gb|EEG09298.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 927

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 44/252 (17%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPK----KVFSHGFILH-KGEKISKSLGNV 310
           WPADL++ G D    H  ++ + LL+    + +    ++ +HGF++  KG K+SKS GNV
Sbjct: 555 WPADLYLEGSDQ---HRGWFQSSLLTGCATIGRAPYQQLLTHGFVVDGKGLKMSKSKGNV 611

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD---LANGIGNLVSRSVS 367
           + P +V + +G D LR ++      G+    D+  + KRV      L N +  L++    
Sbjct: 612 VAPQKVNDSLGADILRLWVASTDYSGELAISDE--ILKRVTESYRRLRNTLRFLLAN--- 666

Query: 368 MILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQL-----IHRALAQVISLV 421
             L D+D   P   A   SD   I      + +E++E +  +L      H A+ +++   
Sbjct: 667 --LSDFD---PLDNAVPFSDLLEIDQYAILMAKELQEKVTGELYTRYAFHHAVQEIVGYC 721

Query: 422 SE----------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           SE           DR +  Q     +++    A T LY    + R L +L+   +   A+
Sbjct: 722 SEDLGAFYLDVLKDRLYTTQADSRARRS----AQTALY---HITRSLLLLIAPILCFTAD 774

Query: 472 KIFDILFVADEN 483
           + +++L  ++E 
Sbjct: 775 EAWEVLTKSEEE 786



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   ++ D++ R   L G D  +  G D HG  I
Sbjct: 49  RPKFILHDGPPYANGDIHIGHAVNKVLKDIIVRSKTLAGFDAPYVPGWDCHGLPI 103


>gi|32490917|ref|NP_871171.1| hypothetical protein WGLp168 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173146|sp|Q8D333|SYL_WIGBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|25166123|dbj|BAC24314.1| leuS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 864

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 47/90 (52%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  + + YP+ + H+GH    ++ DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  KKDKYYCVSMMPYPSGKLHMGHVRNYVLGDVIARYQRMLGKNVLHPIGWDAFGLPAETAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            N  ++ + +   +    ++   +L  SYD
Sbjct: 91  INNKISPEKWTISSIEYMKNQLKLLGCSYD 120


>gi|313667476|ref|YP_004047760.1| valyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313004938|emb|CBN86365.1| valyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 945

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|209694553|ref|YP_002262481.1| leucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064863|sp|B6EIN2|SYL_ALISL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|208008504|emb|CAQ78675.1| leucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 858

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+ +KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREFATCTPE-YYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEY 198


>gi|57167974|ref|ZP_00367113.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020348|gb|EAL57017.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 810

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKIGYNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKNELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L  N P  + + + G +L  
Sbjct: 519 DKESVKYWMNVDQYIGGIEHAILHLLYARFFQKVLKDLGYLEDNEPFAR-LLTQGMVLKD 577

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           G K+SKS GNV+DP ++I + G D  R F++      K+  ++ D ++
Sbjct: 578 GAKMSKSKGNVVDPDDIINKYGADTARLFILFAAPPAKELEWNDDAVE 625


>gi|305431875|ref|ZP_07401042.1| leucine--tRNA ligase [Campylobacter coli JV20]
 gi|304444959|gb|EFM37605.1| leucine--tRNA ligase [Campylobacter coli JV20]
          Length = 810

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKIGYNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKSWTYENIAYMKNELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +D+    +++V    DG+ +   H  VQ  +  GY+ +++AY
Sbjct: 152 ANVNWCEQDQTVLANEQV---EDGKCWRCGHEVVQ-KKMPGYYVKITAY 196



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L  N P  + + + G +L  
Sbjct: 519 DKESVKYWMNVDQYIGGIEHAILHLLYARFFQKVLKDLGYLEDNEPFAR-LLTQGMVLKD 577

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G K+SKS GNV+DP ++I + G D  R F++
Sbjct: 578 GAKMSKSKGNVVDPDDIINKYGADTARLFIL 608


>gi|261400089|ref|ZP_05986214.1| valine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269210316|gb|EEZ76771.1| valine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 945

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTIHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|299142473|ref|ZP_07035605.1| leucine--tRNA ligase [Prevotella oris C735]
 gi|298576195|gb|EFI48069.1| leucine--tRNA ligase [Prevotella oris C735]
          Length = 968

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ ARF RL G +VL   G D +G    +
Sbjct: 28  KTKKKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARFKRLQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G    +  + N  ++R+  D +  S+D
Sbjct: 88  YAIQTGQHPAITTETNINHYREQLDKIGFSFD 119


>gi|218680715|ref|ZP_03528612.1| leucyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 499

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 41  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 101 ERGVHPASWTYQNIGSMKAQLKAMGLSLD 129


>gi|167044145|gb|ABZ08828.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG5C13]
          Length = 951

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 102/228 (44%), Gaps = 27/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS--ANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           F+P D    G+D++  H  +   F+L+  A  P    P+++  +G +L  G+K+SKS+GN
Sbjct: 570 FYPVDSRHSGRDLVPNHLTF---FVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGN 626

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +I   E + + G D +R  ++      +D  ++ + +K         GI N ++      
Sbjct: 627 IIPLREAVRKYGADPIRLTILISAELLQDADFNVEAIK---------GIKNKLASMYEDC 677

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K      P        D+ I  +   ++    ++M    +  AL  ++         FD
Sbjct: 678 TKTKAEKFP---ELEPEDKWIHGILQNLVLNAGKSMDEIRLREALHHILF-------DFD 727

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++  W LK+T   + + +  +  +++    ++L  F P +A ++++ L
Sbjct: 728 SELQWYLKRTKSKQRTNISGILHKILSYRVLMLSPFAPHIAEEMWEKL 775



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          +EK +I+ A  YPN+  HIGH     I DV +R+ R+ G +VLF  G    G  I
Sbjct: 29 KEKKFITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGFNVLFPMGFHYTGTPI 83


>gi|326390266|ref|ZP_08211826.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993711|gb|EGD52143.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 816

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 42/240 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K              +SR
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIK-------------AISR 624

Query: 365 SVSMILKDYDGMIPT---PGAFTES---DESILS-VCSRVLQEIRENMQNQLIHRALAQV 417
            V+ + +  D  I T   PG   +    DE+ L+ V    ++ + E+ +    + A+A++
Sbjct: 625 FVNRVERFIDKFIETRNNPGKTKDEMGKDENELNYVRHYAIKGVTEDAERFQFNTAIARI 684

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ + +Y              D     +    EV+  L  LL  F P  + ++++ L
Sbjct: 685 MELVNALYKY------------EADVEVKNIKFYEEVVADLIKLLAPFAPHFSEEMWEKL 732



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  ++ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKKMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  R+M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYE 122


>gi|323345307|ref|ZP_08085530.1| isoleucine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093421|gb|EFZ35999.1| isoleucine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 1201

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 40/270 (14%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           K++PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK LGNV
Sbjct: 707 KYYPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHLGNV 765

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRSVS 367
            DP E++ + G D +R++++       +  +D +G   ++++    L N      + S  
Sbjct: 766 TDPFEMMSKYGADPVRFYMMTNSEPWDNLKFDPEGVDEVRRKFFGTLYN------TYSFF 819

Query: 368 MILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIH----RALAQVISLV 421
            +  + DG  P   P AF +  E    + S  L  + EN+  +LI     RA   + S V
Sbjct: 820 ALYANVDGFDPKVQPIAFDKRPEIDRWILSE-LHSLIENVDTELIEYDPTRAGRLIDSFV 878

Query: 422 S-EVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF-- 474
           + ++  +F   + ++ W  K+ + D+ S   Y T+ E +  +A LL  F P  A++++  
Sbjct: 879 NDDLSNWFVRLNRKRFWG-KEMSEDKLSA--YQTLYECLMTVAKLLAPFAPFYADQLYHD 935

Query: 475 ----------DILFVADENRCFQSLDQRLK 494
                     D+  VAD+    + L+ R++
Sbjct: 936 LGGKLESVHLDVYPVADKKFIDKELEIRME 965


>gi|295695843|ref|YP_003589081.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411445|gb|ADG05937.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 829

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y      YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     AA 
Sbjct: 42  RPHYYCLEMFPYPSGKLHMGHVRVYSIGDVVARVKRMQGYNVLHPMGWDAFGMPAENAAI 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV  +++  +N  + R     L +SYD
Sbjct: 102 QHGVHPRLWTYENIDHMRQQQKRLGVSYD 130



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G ++ +G K+SKS GNV+ P ++I   G D  R F++      +D  ++  G++
Sbjct: 577 RHLLTQGMVIKEGAKMSKSKGNVVSPDDIINRYGADTARLFILFAAPPDRDLEWNDQGVE 636


>gi|296139191|ref|YP_003646434.1| valyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027325|gb|ADG78095.1| valyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 893

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 10/124 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--LL 280
           DP  ++  W  +     +T G+ +      AKF+P    V G DI+ F       F   +
Sbjct: 454 DPD-VLDTWFSSGLFPFSTMGWPEQ-TADLAKFYPTSTLVTGYDIIFFWVARMMMFGTFI 511

Query: 281 SANLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                 P  V  H  +LH       G+K+SKS GN IDP++ ++E G DALR+ L R   
Sbjct: 512 GEQPSAPGAVPFHEVLLHGLVRDEFGKKMSKSKGNGIDPLDWVDEYGADALRFTLARGTI 571

Query: 335 CGKD 338
            G D
Sbjct: 572 PGAD 575



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 13/73 (17%)

Query: 6   KLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K   S  +  PN     H+GHA +  I D L R  R+ G +VL+  GTD           
Sbjct: 43  KPAFSVVLPPPNVTGSLHLGHALDQTITDALCRRKRMQGYEVLWLPGTD----------- 91

Query: 64  NAGVTTKVFVDQN 76
           +AG+ T+  V++ 
Sbjct: 92  HAGIATQSLVEKQ 104


>gi|330444673|ref|YP_004377659.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807783|gb|AEB41956.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 1066

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 30/283 (10%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N +  +  F PAD    G D  R    ++   +++A L
Sbjct: 517 YVFDCWFDSGAMPYAQNHYPFENKEVFENAF-PADFISEGLDQTR--GWFYTLTVIAAAL 573

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  + V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 574 FDRPAFRNVIVNGIILAEDGNKMSKRLNNYPSPKSILDSYGADALRLYLLHSVVVKAEDL 633

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESIL 391
            F DK  +G+ K+V   L+N +      S   I  D     P         +TE D  IL
Sbjct: 634 RFSDKGVEGILKQVLLPLSNVL------SFYKIYADLYKFDPKKCPQESLTYTEMDLWIL 687

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TV 447
           S    V++++   M    ++ A+   +  + ++  ++     ++ WE + +   RA+   
Sbjct: 688 SNLYSVVKKVHSGMDIYNLNAAVEPFVDFIDDLTNWYVRRSRRRFWEAEDSADRRAAFAT 747

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           LY   EV+     ++  FVP +A  IF  L   +E       D
Sbjct: 748 LY---EVLFVFCRVIAPFVPFIAEDIFQQLTAGNEEESVHLCD 787


>gi|312875055|ref|ZP_07735073.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089450|gb|EFQ47876.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 804

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|260912265|ref|ZP_05918816.1| valine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633566|gb|EEX51705.1| valine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 878

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 29/242 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++ PD  +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INQPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DPIE+IE+ G D +R  ++     G D  +D+   ++  N    N
Sbjct: 529 DKLGRKMSKSLGNSPDPIELIEQYGADGVRMGMMLSAPAGNDILFDEALCEQGRN--FNN 586

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         + D     P P A   + +   +   +  +E+ +      I  AL  
Sbjct: 587 KIWNAFRLVKGWEVSDQ----PQPEASRIACQWFEAKLRQTNEELNDLFSKYRISEALMA 642

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P   S +       T+     L  +L  F+P +  +
Sbjct: 643 VYRL------FWDEFSSWYLEMVKPAYGSPIDSHTYNATLRYFETLLNMLHPFMPFITEE 696

Query: 473 IF 474
           ++
Sbjct: 697 LW 698


>gi|296127077|ref|YP_003634329.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018893|gb|ADG72130.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 853

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     IAD +AR++RL G D+L   G D  G     AA  
Sbjct: 31  KKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYRLLGYDILHPMGWDAFGMPAENAAIE 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
                  +  +N  N ++  ++L  SYD
Sbjct: 91  HKTHPAEWTLKNIANMKEQLNLLGYSYD 118



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 25/187 (13%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           I+ K EK+SKS  N IDP E+IE  G DA+R F++      KD  +  +G+K   +A   
Sbjct: 603 IIVKMEKMSKSKANGIDPTEIIELFGADAVRIFVMFAAPPEKDKEWSDEGVKG--SARFL 660

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQL-I 410
           N I NL  +      KD +             ++  +++     + ++++  +++++   
Sbjct: 661 NRIWNLFLK-----YKDEEAFKNNKSFDYNNLSKEAKNLYKKYHKTIKKVTIDIKDRFHF 715

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A ++ L++++             K N D    +     EVIR   ILL    P + 
Sbjct: 716 NTAIAALMELLNDMSSI----------KLNGDDEYAMF---KEVIRGYLILLNPIAPHIT 762

Query: 471 NKIFDIL 477
            +++ IL
Sbjct: 763 EELYQIL 769


>gi|213650456|ref|ZP_03380509.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 546

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQV---IDGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|331000983|ref|ZP_08324619.1| isoleucine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
 gi|329569758|gb|EGG51522.1| isoleucine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
          Length = 956

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 13/128 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+ T ++T         GS A    +PADL++ G D  R  FH+       +    P
Sbjct: 564 VWFDSGTTHMTVM------RGSHADKLTYPADLYLEGSDQHRGWFHSSLLTGCAIDGRAP 617

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + +HGF +  +G K+SKSLGNVI P E+ ++ G + LR ++      G+    +K 
Sbjct: 618 Y-KGLLTHGFTVDEQGRKMSKSLGNVIAPSEINDKYGAEILRLWVASSDYTGEISLGEKI 676

Query: 345 GLKKRVNA 352
            LK  V+A
Sbjct: 677 -LKGTVDA 683



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   I+ D++ +   L+G D  +  G D HG  I
Sbjct: 70  YANGNIHVGHAVNKILKDIILKSRTLEGFDAPYVPGWDCHGMPI 113


>gi|259501448|ref|ZP_05744350.1| leucine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190828|ref|ZP_07267082.1| leucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167197|gb|EEW51692.1| leucine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 804

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|254429394|ref|ZP_05043101.1| leucyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195563|gb|EDX90522.1| leucyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 834

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 51  KEKFYCLSMFPYPSGRLHMGHVRNYSIGDVVSRYQRMQGKNVLQPMGWDAFGLPAENAAI 110

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    R     L   Y  D  + T    ++   +  + K+ +KG +Y+
Sbjct: 111 KNKVAPAKWTFENIDYMRGQLQRLGFGYDWDRELATCTPEYYRWEQWFFTKLYEKGLVYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG+ + +    V+  E   +F +++ Y D+LL+   
Sbjct: 171 KMSTVNWDPVDQTVLANEQVI---DGRGWRS-GALVEQKEIPQWFIKITDYADELLNDLD 226

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 227 QLDGWPEQVKTMQR 240



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D +   +W P D ++ G +    H +Y   F        L++ + P  K++   G +L  
Sbjct: 532 DPAATNYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDTGLVNCDEPF-KQLLCQGMVLKD 590

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G K+SKS GN +DP ++IEE G D +R F++
Sbjct: 591 GAKMSKSKGNTVDPQQMIEEYGADTVRLFMM 621


>gi|159899490|ref|YP_001545737.1| isoleucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892529|gb|ABX05609.1| isoleucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1061

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 41/232 (17%)

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V   G +L  KGEK+SKS GN++ P E++E+ G DA+R+++    A G+   Y+ 
Sbjct: 591 PAYKNVICLGHLLDGKGEKMSKSKGNIVSPWEMVEKYGADAVRWYM---FAAGQP--YN- 644

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMIL-------------KDYDGMIP--TPGAFTESDE 388
               +R +AD       LVS S+   L              + DG  P    G     D 
Sbjct: 645 ---PRRFSAD-------LVSESLRQFLLTLWNTYSFFTTYANVDGWTPELAQGDLAAIDR 694

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR-- 443
             L+  + +++++R ++ N  ++    ++   V E+  ++   + ++ W     N D+  
Sbjct: 695 WALARLNALVRDVRNDLSNYDMNTPAKRLEQFVDELSNWYVRRNRRRFWG-SDMNGDKQA 753

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           A + LY  +  I +   L+  F P +A  ++  L  + +    +S+   L P
Sbjct: 754 AYSTLYTCLVTISK---LMAPFTPFVAESLYQNLVRSYDQTAAESVHMALYP 802


>gi|312873594|ref|ZP_07733641.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090847|gb|EFQ49244.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 804

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|309803462|ref|ZP_07697556.1| leucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164471|gb|EFO66724.1| leucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 804

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|300741553|ref|ZP_07071574.1| leucine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380738|gb|EFJ77300.1| leucine--tRNA ligase [Rothia dentocariosa M567]
          Length = 831

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 18/199 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+   H+GHA    I D+ AR+++  G DVL   G D  G     AA 
Sbjct: 41  KGRRYVLDMFPYPSGDLHMGHAEAFAIGDMNARYYKQCGYDVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G   K +    +D  + +F+  A  +D  +D  + T++  ++   + L+++   KG  
Sbjct: 101 KNGTHPKEWTYKNIDTQAESFKRYAIAVD--WDRRLHTSDPEYYKWTQWLFEQFYKKGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +  +D+    +++V  GA  +      + +  QW      +F+++ Y  +LL
Sbjct: 159 YRKDSMVNWCPKDQTVLANEQVVNGACERCGTTVTKKSLNQW------YFKITDYAQQLL 212

Query: 178 SYYES----HPEFILPIER 192
              E      PE +L ++R
Sbjct: 213 DDMEQLEGKWPERVLLMQR 231



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 37/245 (15%)

Query: 244 YLDNP-DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D    + W A D++V G +    H +Y   F        L+  + P  K + + 
Sbjct: 530 YAEGPFDPQAIREWGAVDMYVGGVEHAILHLLYARFFTKVIRDLGLIEHSEPF-KALMNQ 588

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +L+ G+ +SKSLGN ++  E +++ GVDA+R  ++       D  +          AD
Sbjct: 589 GQVLNGGKAMSKSLGNGVNLGEQLDKFGVDAVRTTMIFASPPEDDVDW----------AD 638

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHR 412
           ++             I +D   +   PG    S D ++  + +R + ++++ +     + 
Sbjct: 639 VSPAGSQKFLARAWRIAQD---VTSEPGVDAASGDANLHKLVARTVHDVKQLLDAGKFNV 695

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +A+ + LV+   +  D         + P  A+  +    E I   AILL  + P  A  
Sbjct: 696 VVAKTMELVNATRKAID---------SGPGGANPAVREAAETI---AILLSLYAPYTAED 743

Query: 473 IFDIL 477
           ++ +L
Sbjct: 744 MWHVL 748


>gi|281426056|ref|ZP_06256969.1| leucine--tRNA ligase [Prevotella oris F0302]
 gi|281399949|gb|EFB30780.1| leucine--tRNA ligase [Prevotella oris F0302]
          Length = 968

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ ARF RL G +VL   G D +G    +
Sbjct: 28  KTKKKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARFKRLQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G    +  + N  ++R+  D +  S+D
Sbjct: 88  YAIQTGQHPAITTETNINHYREQLDKIGFSFD 119


>gi|224532587|ref|ZP_03673209.1| valine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512443|gb|EEF82822.1| valine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 875

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|160901828|ref|YP_001567409.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|226695263|sp|A9BF22|SYL_PETMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160359472|gb|ABX31086.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 828

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 25/193 (12%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K +F+ G I   G K+SKS GNV+ P E+IE+ G DALR +++      +D  ++  G++
Sbjct: 568 KNLFTQGMIYRNGAKMSKSKGNVVSPEEMIEKYGTDALRTYILFMAPPERDAEWNDSGIE 627

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIR 402
                    G    +++  +  +K  D +I     P      +S++ +     + +++I 
Sbjct: 628 ---------GTYRFLNKVWNTYMKIQDKIIHLENKPNYPLKNKSEKDLRRKLHQTIEKIT 678

Query: 403 ENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +++ N   + A++ ++ L++E++ Y +          N D     L +  E      ++
Sbjct: 679 SDIEGNFQFNTAVSSLMELLNELNSYLN----------NTDDKDWNLNLLKEFSEDFVLM 728

Query: 462 LQAFVPKLANKIF 474
           L    P ++ +++
Sbjct: 729 LSPIAPHISEELW 741



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 7/176 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y      YP+   H+GH    +I DV+AR+ R+ G +V+   G D  G     AA  
Sbjct: 33  KKYYDLVMFPYPSGTLHVGHVKNYVIGDVIARYKRMRGYNVMHPFGFDAFGLPAENAAIE 92

Query: 65  AG-VTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            G +  + +  QN    R+    L ISY  +  + T ++ ++   + ++ ++   G  YK
Sbjct: 93  KGNIHPEDWTMQNINIIRNQIKKLGISYNWEREVITCKEDYYKWTQWIFLQLYKNGLAYK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                 +    +    +++V  G   +        V+  + E ++F+++ Y +KLL
Sbjct: 153 KKAPVNWCPNCKTVLANEQVVNGKCERCGTV----VEIKQLEQWYFKITDYAEKLL 204


>gi|85375537|ref|YP_459599.1| isoleucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84788620|gb|ABC64802.1| isoleucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 965

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 11/116 (9%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW D+   ++ T      P+    + WPADL++ G D  R  F +   
Sbjct: 580 PDDYEMVTDILDVWFDSGCTHVFTLESGRWPE----QRWPADLYLEGSDQHRGWFQSSLL 635

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       P    + +HGF +  KG K+SKSLGN +DP +V+E+ G D +R + +
Sbjct: 636 ESCATRGRAPY-DAILTHGFTMDAKGFKMSKSLGNTVDPNKVMEQYGADIIRLWAL 690



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA + I+ D++ R   L G D  F  G D HG  I
Sbjct: 51  REKFILHDGPPYANGDMHIGHAMQRILKDMVVRSQTLLGKDAPFVPGWDCHGLPI 105


>gi|2842556|dbj|BAA24690.1| unnamed protein product [Symbiobacterium thermophilum]
          Length = 143

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 33  RPKYYALAMFPYPSGKLHMGHVRNYTIVDVIARYRRMKGYNVLHPMGFDSFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G    V+  +N          +  SYD
Sbjct: 93  QHGANPAVWTRENIAEMTAQLKQMGYSYD 121


>gi|330718662|ref|ZP_08313262.1| isoleucyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 930

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L T   LD         +PAD+++ G D  R  F++    +  ++
Sbjct: 526 IMDVWFDSGSSWNGVLNTRSELD---------YPADVYLEGSDQYRGWFNSSLITSVAVN 576

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  K V S GF +   G K+SKSLGN I P+EV +++G++ LR + V
Sbjct: 577 GVAPY-KNVISQGFTMDQNGNKMSKSLGNTISPLEVADKMGIEILRLWTV 625



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 58  YANGNIHLGHALNKISKDIIVRYKNMTGFYAPYVPGWDTHGLPIEQQLTKAGHDRKSMPK 117

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
              RN  RD A + +     DF R            T +   +  +I ++  ++DKG I+
Sbjct: 118 YAWRNLARDFALEQVKKQRQDFKRLGVLADWDKPYITLQPEFEAAQIRVFGDMADKGYIF 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGAKPVYWSWSSESALAEAEI 198


>gi|307693305|ref|ZP_07635542.1| leucyl-tRNA synthetase [Ruminococcaceae bacterium D16]
          Length = 807

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+ Q  H+GHA      DV+AR  R+DG +VLF  G D  G      
Sbjct: 30  DKKKFYALVEFPYPSGQGLHVGHARPYTAMDVVARKRRMDGYNVLFPMGYDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +        N  NFR    +L  S+  D  + TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNHIHPAKVTHDNILNFRKQLQMLGYSFDWDREVNTTDPSYYKWTQWIFLQLYKHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK      +    +    ++EV +G           PV   E+  +  +++ Y  +L+
Sbjct: 150 YKTTMPVNWCTSCKCVLANEEVVEGV----CERCGAPVIRKEKSQWMLKITEYAQRLI 203



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 25/178 (14%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISK 305
           +W P D +  G +    H +Y   W  FL    +   K+ +    SHG IL +G EK+SK
Sbjct: 526 YWSPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYQKRTSHGMILGEGGEKMSK 585

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +VIE+ G D +R +++      K   +  +G+K         G    + R 
Sbjct: 586 SRGNVVNPNDVIEQYGADTMRTYIMFIGDFEKAAAWSDNGVK---------GCKRFLDRV 636

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            ++  +       T   +++ +E  +    R ++++ E+++    + A+A +++LV++
Sbjct: 637 WNLATEQEH----TGDEYSQVNEVAV---HRAIKKVSEDIEAMKFNTAIATLMALVND 687


>gi|294950053|ref|XP_002786437.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239900729|gb|EER18233.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1064

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 23/168 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           +++  DP  ++  W  +    ++  G+ + N D  KA F+P+ +   G DIL F    W 
Sbjct: 572 LELAQDPD-VLDTWFSSGLLPMSALGWPNMNTDDMKA-FFPSSVLETGHDILFF----WV 625

Query: 277 AFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++  +L L  ++  H   LH       G K+SKSLGNVIDP+EV+  +G+  L+  L 
Sbjct: 626 ARMVMMSLALTDELPFHTVCLHAMVRDAHGRKMSKSLGNVIDPLEVMSGIGLPELQEKL- 684

Query: 331 REIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMILKDYDG 375
                 K G   +  +KK +     D  +GI    S ++   L  Y G
Sbjct: 685 ------KHGNLPEREIKKAMKGQEKDFPDGIPECGSDALRFGLLAYTG 726


>gi|194337305|ref|YP_002019099.1| isoleucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309782|gb|ACF44482.1| isoleucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 1085

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 28/235 (11%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD    G D  R  F+ ++  A L+  + P  K +  +G IL K G+K+SKS GNV+DP
Sbjct: 578 PADFIAEGVDQTRGWFYTLHAIATLI-FDKPAYKNLIVNGHILDKSGQKMSKSKGNVVDP 636

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGL---KKRVNADLANGIGNLVSRSVSMIL 370
            E +E  G DALR++L+      +   ++ D +   +++      N     V  +     
Sbjct: 637 FETMERYGADALRWYLLVASPPWRPKSFNSDEIEEEQRKFFRAFINSYNFFVLYANVDRF 696

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
              + +IP     +E D  +LS  + ++  +   M+       L   + L++  D   D 
Sbjct: 697 TFAEPIIPVQER-SELDRWVLSCLNSLVDAVHMRME----QYDLTGAVRLIN--DFTVDD 749

Query: 431 QKPWELKKT---------NPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              W ++++          PD+  A   LY  +E    L+ LL  F P LA +IF
Sbjct: 750 LSNWYIRRSRKRFWKSDMGPDKIAAYQTLYGVLET---LSKLLAPFTPFLAERIF 801


>gi|167849131|ref|ZP_02474639.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 321

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 45  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 104

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            AG   +    + S         L + +D
Sbjct: 105 EAGCAPERLARECSEAMAAQFVRLGLGHD 133


>gi|166367300|ref|YP_001659573.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089673|dbj|BAG04381.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 850

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 29  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              GV    + DQN    +     L +S D
Sbjct: 89  IERGVPPAKWTDQNIAQMKRQLQQLGLSID 118



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 21/177 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP++V+E+ G D  R F++      KD  ++  G++ +          N
Sbjct: 611 EKMSKSKYNGVDPLKVLEKYGADTARMFILFTAPPEKDLQWEDAGVEGQFR------FLN 664

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R VS  +++    +     F+++D+ +       ++EI E+++         Q  + 
Sbjct: 665 RVWRLVSEYIENKPKQVKKIETFSKTDKDLRRAIHTAIKEISEDLEGDY------QFNTA 718

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +SE+ +  +A           D       +  E I  L ILL  F P L+ +++  L
Sbjct: 719 ISELMKLSNALG---------DNKCFASPIYREGIETLLILLSLFAPHLSEELWQAL 766


>gi|152993621|ref|YP_001359342.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425482|dbj|BAF72985.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 813

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 18/183 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI +   +P+ + H+GH     I D  AR++R    +VL   G D  G     AA
Sbjct: 29  EQKKKYILSMFPFPSGRLHMGHVRNYAIGDAFARYYRKQNFNVLHPIGWDAFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------IS 114
              G   K +   N    R   + L +S+      ++ R   TC  L+ K        + 
Sbjct: 89  IKHGRHPKEWTYSNIDYMRKELNTLGLSF------SKTREFATCDPLYTKHEQKFIIEMF 142

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           +KG +Y+   +  +         +++V +G   +      N V+  E  GY+  +  Y D
Sbjct: 143 EKGLLYRESTTVNWCESCHTVLANEQVEEGCCWRC----DNEVELKEMPGYYLDIIKYAD 198

Query: 175 KLL 177
           +LL
Sbjct: 199 ELL 201



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ + G +L  G K+SKS GN +DP  ++E+ G D  R F++
Sbjct: 567 RLLTQGMVLMDGAKMSKSKGNTVDPDALVEKYGADTARLFIL 608


>gi|158521204|ref|YP_001529074.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510030|gb|ABW66997.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 929

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPADL++ G D  R  FH+    A       P  K V +HGF++   G+K+SKS+GNVI 
Sbjct: 555 WPADLYLEGSDQHRGWFHSSLLTAVGTRGRAPY-KSVLTHGFVVDGNGKKMSKSMGNVIA 613

Query: 313 PIEVIEEVGVDALRYFLV 330
           P  +I++ G + LR ++ 
Sbjct: 614 PDAIIKKYGAEILRLWVA 631


>gi|298241842|ref|ZP_06965649.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297554896|gb|EFH88760.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 818

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 16/208 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           +M  W  +  + L    ++D+P+   A+ +PA L     DI+R  A Y    A   +  L
Sbjct: 458 VMDTWATSSCSPLIIANWVDDPE-RFARHFPASLRPQAHDIIRTWAFYTIVKALYHAGEL 516

Query: 285 PLPKKVFSHGFILHKGEKISKSLGN--VIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           P  + + S   +  +  KISKS GN     P+E++E    DALRY+    I  G D  + 
Sbjct: 517 PWREVLVSGHALSAERSKISKSKGNSHTGGPLELVERESADALRYWAT-SIKPGLDTPFH 575

Query: 343 KDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            + +   +R+   L N      +R +  +  +     P P     +D  +L   +R+ Q 
Sbjct: 576 PELIANGRRLVTKLWNA-ARFAARHLQELSPEEIASTPEPNGLLPTDRWLL---ARLAQT 631

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYF 428
           I E+   +LI    A   +  +EV+R+F
Sbjct: 632 I-EHATRELIENDYA---AARAEVERFF 655



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGH Y    ADV+ARFHR+ G  VL+  G D++           G+ T+ +V++  +  
Sbjct: 51  HIGHCYSYTQADVIARFHRMLGERVLYPMGFDDN-----------GLPTERYVEKTIKR- 98

Query: 81  RDMADVLDISYDDF-------IRTTEKRHHDTCRILWKKIS 114
                 L++   +F       IR TE+R       LW+++S
Sbjct: 99  ----KALEMELPEFLEQCHTLIRQTEERFE----TLWRRLS 131


>gi|296270393|ref|YP_003653025.1| leucyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093180|gb|ADG89132.1| leucyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 820

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 37/246 (15%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y D P +  K + W P D +V G +    H +Y   F        L+    P  +++ + 
Sbjct: 518 YEDGPFNVEKVRTWCPVDQYVGGVEHAVLHLLYSRFFTKVLYDMGLVDFTEPF-QRLLNQ 576

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G ++++G+ +SKSLGN +D  E IE+ GVDA+R  +V       D  +          AD
Sbjct: 577 GQVINQGKAMSKSLGNGVDLGEQIEKYGVDAVRLTMVFAGPPEDDIDW----------AD 626

Query: 354 LANGIGN-LVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           ++       ++R++ ++ +   G    PG  F++ D ++  V  RV+ E+ + ++    +
Sbjct: 627 VSPAASQKFLARALRVMTE--AGAASAPGVDFSKGDVALRKVTHRVIDEVTKLVEAYRFN 684

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A+++ L + + R  D         + P  A   +    E    LAI+L    P  A 
Sbjct: 685 VAVARMMELTTAIRRAID---------SGPGAADPAVR---EAAETLAIMLSLVAPYTAE 732

Query: 472 KIFDIL 477
           + ++ L
Sbjct: 733 EGWERL 738



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           R + Y+     YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 35  RPRRYMLDMFPYPSGDLHMGHGEAFAIGDVVARYWFQKGYNVLHPIGWDSFGLPAENAAI 94

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA     T   +D  +R+F+  A   D S    + T++  ++   + L+ +  ++G  
Sbjct: 95  KRNAHPAEWTYANIDTQARSFKQYATSFDWSRR--LHTSDPEYYRWNQWLFLRFYERGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +  +D+    +++V  G     Q    +    QW      +F+++ Y D+LL
Sbjct: 153 YRKDGLVNWCPKDQTVLANEQVINGRCERCQSEVVRRKLTQW------YFKITEYADRLL 206

Query: 178 SYYES----HPEFILPIER 192
              +      PE +L ++R
Sbjct: 207 DDMKQLEGKWPERVLTMQR 225


>gi|149928079|ref|ZP_01916326.1| isoleucyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823165|gb|EDM82402.1| isoleucyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 931

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 12/116 (10%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K PD     + VW D+ T + T    L      ++ F PADL++ G D  R  FH+   
Sbjct: 533 VKNPD----TLDVWFDSGTTHETV---LRGSHADESHF-PADLYLEGSDQHRGWFHSSLL 584

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + +++  +P  K + +HGF++  +G K+SKS+GNVI P +V +++G + LR ++ 
Sbjct: 585 TSCMING-VPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQQVSDKMGAEILRLWVA 639



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 39/93 (41%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I    +
Sbjct: 47  KPKFVLHDGPPYANGDIHIGHAVNKILKDIIVKCRCLAGYDARYVPGWDCHGMPIEIQIE 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                 K  ++   ++    A+ ++    DFIR
Sbjct: 107 KTIGKGKPTLEVQEKSRAYAAEQIERQKKDFIR 139


>gi|325913404|ref|ZP_08175771.1| leucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477330|gb|EGC80475.1| leucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 804

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|325283179|ref|YP_004255720.1| Isoleucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314988|gb|ADY26103.1| Isoleucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 1091

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 40/313 (12%)

Query: 190 IERRNEVISFVKSGLKDLSLSRK-----TFDWG----IKIPDDPQYIMYVWIDALTNYLT 240
           +  R E+ +     L +L L R      TF  G     +IP+    ++ VW D+      
Sbjct: 510 VGSRAELAALTGRDLSELDLHRPYIDDITFTLGGQEYRRIPE----VLDVWFDSGAMPYA 565

Query: 241 TTGYLDNPDGSK-------AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVF 291
             G L + +G+        A+ +PAD      D  R  F+ ++  + LL    P  + V 
Sbjct: 566 QWGLLLDDEGNAVRGGEEFARHYPADFICEAIDQTRGWFYTLHAISTLLYGQ-PAYRNVI 624

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           S G I+  KG K+SKS GNV+ P+ + ++ G D++R+++      G     D+    +R+
Sbjct: 625 SLGHIVDEKGFKMSKSKGNVVAPLPLFDQYGADSVRWYMFTASDPG-----DQKRFSERL 679

Query: 351 NADLANG----IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             +   G    + N+ S  V     D   +   P A +E  E    + SR+ + +R ++ 
Sbjct: 680 VGEAQRGFVSTLWNVYSFFVLYANLDKPDLSSAP-AVSERPEMDRWLLSRLEETVR-DVT 737

Query: 407 NQLIH---RALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAIL 461
           + L H   R   Q + + V E+  ++  +          +   T  Y T+ E +  +++L
Sbjct: 738 DALEHYDARGGGQALATFVDELSNWYVRRSRSRFWTEGEENVDTAAYATLHEALLTVSLL 797

Query: 462 LQAFVPKLANKIF 474
              F P LA+++F
Sbjct: 798 AAPFTPFLADELF 810


>gi|255691691|ref|ZP_05415366.1| valine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622652|gb|EEX45523.1| valine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 878

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 46/277 (16%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   + K++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D D L ++   +  N
Sbjct: 529 DKQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFCN 586

Query: 357 GIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N    +  +I    +GM  +P P     + +           E+ +      +  AL
Sbjct: 587 KIWN----AFRLIKGWTNGMGSVPIPADAHLAVQWFDQRLDAAAVEVADLFSKYRLSEAL 642

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTV---LY-VTVEVIRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P     V   +Y + +    +L  +L  F+P   
Sbjct: 643 MLVYKL------FWDEFSSWLLEIVKPAYGQPVNGFIYDMVLSSFERLLEMLHPFMP--- 693

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG--FMLHKTFDP 505
                  F+ +E   +Q L +R KPG   M+ + F+P
Sbjct: 694 -------FITEE--LWQQLRER-KPGASLMVTQMFEP 720


>gi|50307489|ref|XP_453724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642858|emb|CAH00820.1| KLLA0D14971p [Kluyveromyces lactis]
          Length = 1091

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 13/123 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSAN 283
           ++  W  +     +T G+ D  PD S+  F+PA +   G DIL F    +      L+ +
Sbjct: 614 VLDTWFSSGLYPFSTLGWPDKTPDMSQ--FYPASMLETGWDILFFWVSRMILLGLKLTGS 671

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACG 336
           +P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      RE+   
Sbjct: 672 IPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVISGIKLEDLHAKLLQGNLDPREVEKA 730

Query: 337 KDG 339
           K+G
Sbjct: 731 KNG 733



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           HIGHA  + I D L R++R+ G  VLF  G D  G
Sbjct: 184 HIGHALTIAIQDSLCRYYRMKGKTVLFLPGFDHAG 218


>gi|261840237|gb|ACY00003.1| leucyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 806

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 14/123 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNL 361
           GNV+ P E++++ G DA R F++      K+  ++ + L+      KR+  D AN I + 
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALEGAHRFIKRL-YDKANAIKST 636

Query: 362 VSR 364
            S+
Sbjct: 637 TSK 639


>gi|42560851|ref|NP_975302.1| valyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400731|sp|Q6MTU2|SYV_MYCMS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42492347|emb|CAE76944.1| valine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320951|gb|ADK69594.1| valine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 872

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 35/214 (16%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+ + WG +IP 
Sbjct: 359 DQWFVKMDKFKNMVIDLQNSDNKINFYPNRFSDVLNRWMTDAHDWCISRQLW-WGHQIPC 417

Query: 222 --DDPQYIMYVWIDA---LTNYLTTTGYLD--------------NPDGSKAKFW----PA 258
                   MYV I+    + N+      LD              N  G +++++    P 
Sbjct: 418 WYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYFKNYFPT 477

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVID 312
            + V G DI+ F    W A ++   L   K+     V  HG +      K+SKSLGN ID
Sbjct: 478 SVLVTGYDIIFF----WVARMIFQTLEYTKQIPFKDVLIHGLVRDESNRKMSKSLGNGID 533

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P++VI   G D+LR FL+     G+D  Y  + +
Sbjct: 534 PMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKI 567



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA++  + D + RF +L G D LF  G D  G
Sbjct: 53 HIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSG 87


>gi|329919670|ref|ZP_08276648.1| leucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328937322|gb|EGG33746.1| leucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 804

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|325300669|ref|YP_004260586.1| Isoleucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324320222|gb|ADY38113.1| Isoleucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 1161

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 10/100 (10%)

Query: 253 AKFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKS 306
             ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK 
Sbjct: 659 GSYYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKR 714

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           LGN +DP   IE+ G D LR++++   A   +  +D DG+
Sbjct: 715 LGNAVDPFSTIEKFGSDPLRWYMITNSAPWDNLKFDTDGV 754


>gi|193213365|ref|YP_001999318.1| isoleucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086842|gb|ACF12118.1| isoleucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 1080

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 31/268 (11%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
           K +PAD    G D  R  F+ ++  A L+  + P  + +  +G IL  KG+K+SKS GNV
Sbjct: 574 KTFPADFIAEGVDQTRGWFYTLHAIATLI-FDRPAYRNLVVNGHILDKKGQKMSKSKGNV 632

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL---KKRVNADLANGIGNLVSRSVS 367
           +DP E +E+ G DA+R++L+      +   ++   +   +++      N     V  +  
Sbjct: 633 VDPFESMEQYGADAIRWYLMITSPPWRPKLFNVAEIEEEQRKFFRAFINSYNFFVLYANV 692

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVSEVD 425
              ++ +  IP     +E D  +LS  + ++ E+   M++  +  A +++I    V ++ 
Sbjct: 693 DGFRNEEATIPF-AERSELDRWVLSSLNTLVAEVTRRMESYDLTGA-SRLIGDFTVDDLS 750

Query: 426 RYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----- 478
            ++   ++K +   +  PD+ S    +   V+  L+ L+  F P +A KI+  L      
Sbjct: 751 NWYIRRSRKRFWKGEMGPDKLSAYQTLAT-VLETLSKLMAPFAPFIAEKIWLDLKSVGGT 809

Query: 479 ------------VADENRCFQSLDQRLK 494
                       VADE+   ++L++R+K
Sbjct: 810 AKAESVHLADWPVADESCIDEALEERMK 837


>gi|81300729|ref|YP_400937.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123556548|sp|Q31LW9|SYL_SYNE7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81169610|gb|ABB57950.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 865

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+   H+GH     I D +AR  R  G  VL   G D  G     AA
Sbjct: 47  DRPKFYALSMFPYPSGNLHMGHVRNYTITDAIARVKRRQGFRVLHPMGWDAFGLPAENAA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            + GV    +  QN    R+    L +SYD
Sbjct: 107 IDRGVQPADWTYQNVAQMREQLKQLGLSYD 136



 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 27/178 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  V++  G D  R F++ +    KD  +D        +AD+  G   
Sbjct: 628 EKMSKSKYNGVDPARVLDRYGADTARMFILFKAPPEKDLEWD--------DADV-EGQFR 678

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            ++R V  +++    +  T  A  ++++ +       +Q + E+++    ++ A+A+++ 
Sbjct: 679 FLNR-VWRLVQTASQVEATTAADDKAEKDLRRAVHTAIQAVTEDLEEDYQLNTAIAELMK 737

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L + ++   DA  P            +  Y  +E ++ L +LL  F P +A +++  L
Sbjct: 738 LTNALN---DAPMP-----------GSPAY--LEGVQTLVLLLAPFAPHIAEELWQQL 779


>gi|309781281|ref|ZP_07676017.1| leucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308919694|gb|EFP65355.1| leucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 877

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKGV 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+  ++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLGITKYAQELLS 210


>gi|254429356|ref|ZP_05043063.1| valyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195525|gb|EDX90484.1| valyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 928

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ ++ D  +  F P D+ V G DI+ F    W A ++   L  
Sbjct: 445 VLDTWFSSALWTFSTLGWPEDTDALRT-FHPTDVLVTGFDIIFF----WVARMIMMTLKF 499

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 KKV+ HG +  + G+K+SKS GNV+DP+++I+ + +DAL
Sbjct: 500 TDQVPFKKVYVHGLVRDNDGQKMSKSKGNVLDPLDMIDGITLDAL 544



 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNA-GVTTKV 71
           H+GHA++  I D L R+ R+ G + L+  GTD  G        +K+A    N   +  + 
Sbjct: 47  HMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTDHAGIATQMVVERKLAGEGTNRHELGREK 106

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+            +R  R M   +D + + F  T +    +  R ++ ++  +G IY
Sbjct: 107 FLDKVWEWKGESGGTITRQLRRMGASVDWTRERF--TMDDGLSNAVREVFVRLHKEGLIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166


>gi|159031023|emb|CAO88726.1| leuS [Microcystis aeruginosa PCC 7806]
          Length = 850

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 29  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              GV    + DQN    +     L +S D
Sbjct: 89  IERGVPPAKWTDQNIAQMKRQLQQLGLSID 118



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 21/177 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP++V+E+ G D  R F++      KD  ++  G++ +          N
Sbjct: 611 EKMSKSKYNGVDPLKVLEKYGADTARMFILFTAPPEKDLQWEDAGVEGQFR------FLN 664

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R VS  +++    +     F+++D+ +  V    ++EI E+++         Q  + 
Sbjct: 665 RVWRLVSEYIENKPKQVKKIETFSKTDKDLRRVIHTAIKEISEDLEGDY------QFNTA 718

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +SE+ +  +A           D       +  E I  L ILL  F P L+ +++  L
Sbjct: 719 ISELMKLSNALG---------DNKCFASPIYREGIETLLILLSLFAPHLSEELWQAL 766


>gi|148242287|ref|YP_001227444.1| leucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|189083177|sp|A5GT82|SYL_SYNR3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147850597|emb|CAK28091.1| Leucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 864

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 44/103 (42%), Gaps = 1/103 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 38  ENFYALSMFPYPSGNLHMGHVRNYVITDVIARLMRLKGKRVLHPMGWDAFGLPAENAAIE 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            GV    + D+N    R+    L +S  D+ R     H D  R
Sbjct: 98  RGVDPADWTDRNIAQMREQLQRLGLSI-DWSREVATCHSDYYR 139


>gi|194468388|ref|ZP_03074374.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453241|gb|EDX42139.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 950

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL          +PA+L++ G D  R  F++    + + S
Sbjct: 544 IMDVWFDSGSSHQGVLAERDYLT---------YPANLYLEGSDQYRGWFNSSLITSVVCS 594

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            + P  K++ S GF L K G K+SKS GNVIDP +V++++G + +R +++
Sbjct: 595 GHAPY-KEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVM 643



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D + R+  + G    +  G D HG  I      +G   K    
Sbjct: 77  YANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRK---K 133

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FRD+     +   D  RT  KR
Sbjct: 134 MSLTEFRDLCREYALKQVDKQRTDFKR 160


>gi|167827656|ref|ZP_02459127.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 317

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            AG   +    + S         L + +D
Sbjct: 102 EAGCAPERLARECSEAMAAQFVRLGLGHD 130


>gi|78186311|ref|YP_374354.1| isoleucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|78166213|gb|ABB23311.1| Isoleucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 1089

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 29/292 (9%)

Query: 203 GLKDLSLSRKTFDW------GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKF 255
           GL +L L +   D       G++    P+ I  VW D+ +       Y  +N +  +  F
Sbjct: 525 GLAELDLHKPFVDRIYFIRDGVRFTRTPELID-VWFDSGSMPFAQLHYPFENRELFEQTF 583

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
            PAD    G D  R  F+ ++  + LL  + P  + +  +G IL K G+K+SKS GNV+D
Sbjct: 584 -PADFIAEGVDQTRGWFYTLHAVSTLL-FDRPAYRNLIVNGHILDKNGQKMSKSKGNVVD 641

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E +++ G DA+R++L+      +   ++ + +++         I    S +  ++  +
Sbjct: 642 PFETMQKYGADAIRWYLLVASPPWRPKSFNTEEIEEEQRKFFRAYIN---SYNFFVLYAN 698

Query: 373 YDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVSEVD 425
            DG   +  A      +E D  +LS  S ++  +   M+   +  A A+++   +V ++ 
Sbjct: 699 VDGFTGSEPAVPLLQRSELDRWVLSSLSSLVGGVHSRMEQYDLTGA-ARLVDDFIVDDLS 757

Query: 426 RYF--DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
            ++   ++K +      PD+ +   Y ++ + +  LA LL  F P LA +I+
Sbjct: 758 NWYIRRSRKRFWKSDMGPDKLAA--YQSLHQCLETLARLLAPFTPFLAERIY 807


>gi|57641209|ref|YP_183687.1| valyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74504649|sp|Q5JGN7|SYV_PYRKO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57159533|dbj|BAD85463.1| valyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 888

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 22/265 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  + K W     P  L   G DI+R  A Y  +  +
Sbjct: 451 VLDCWVDSSITPLIITKWHEAIKGDEEGKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTW 510

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    + +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 511 VLTGEKPWHDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTAL-APPGED 569

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     L+++D     P      D  ILS   R++
Sbjct: 570 HPFKWETVD--YNYRFLQKVWN-IYRFAERHLENFDPA-SAPEELEPLDRWILSRLHRLI 625

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD---RASTVLYVTVE 453
           +   E M+    +    ++I+ V     D Y +  K + L   + +   +A   LY   E
Sbjct: 626 KFATEEMEKYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKAALY---E 681

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
           ++  + +LL  FVP +  +++  LF
Sbjct: 682 LLYNVMLLLAPFVPHITEELYQNLF 706



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG
Sbjct: 38 IDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMTGYNVLFPQGFDNHG 84


>gi|307298046|ref|ZP_07577850.1| leucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916132|gb|EFN46515.1| leucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 791

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN----LPLPKKVFS---HGFILHKGE 301
           DG   K+ P D+++ G +    H +Y     ++ +    LP  +   S   HG I+  GE
Sbjct: 511 DGLVEKWCPVDMYIGGNEHATLHLMYSRFLSMALHDMGFLPFEEPFTSFRGHGLIIKDGE 570

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+SKS GN+++P E  E  GVD LR +L+
Sbjct: 571 KMSKSKGNIVNPNEYFESHGVDTLRTYLM 599


>gi|217031694|ref|ZP_03437198.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
 gi|216946541|gb|EEC25141.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
          Length = 306

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLET 204


>gi|229815165|ref|ZP_04445502.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
 gi|229809395|gb|EEP45160.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
          Length = 862

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 47  KPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGYDVLHPIGFDAFGLPAENAAI 106

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                A   T   +DQ     + M    D+  D  ++T    ++   + +++K+ ++G +
Sbjct: 107 KHNTQAAAWTYRNMDQALATMKRMGFSYDM--DRLVKTCSPDYYRWGQWIFEKLWERGLV 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + E    +++V    +G+ +      V+  + E ++ +++AY  +LL  
Sbjct: 165 YRKKNPVNWCPKCETVLANEQV---TEGRCWRCDSE-VEKRDLEQWYIKITAYAQELLDD 220

Query: 180 YESHP 184
            E  P
Sbjct: 221 LEKLP 225



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 37/223 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFIL-HKGEKIS 304
           +F P D ++ G +    H +Y   F        LL  + P    +   G +    G+ +S
Sbjct: 563 RFMPVDNYIGGIEHAILHLLYSRFFTKALRDMGLLDVDEPF-TNLLCQGMVKDENGDTMS 621

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P  VIE  G D +R  ++      KD  +D   ++         G    + R
Sbjct: 622 KSKGNVVPPSSVIEPFGADTMRLAILFIAPPEKDFDWDPKAVE---------GANRFIKR 672

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCS--------RVLQEIRENMQNQLIHRALAQ 416
           +  ++ +    +  T G     D+  LS  +        R L +  E+      + A++ 
Sbjct: 673 AWRIVWQ----LAETAGDAASLDKGALSKPALELYRERHRTLAKCTEDFDRGQFNTAISA 728

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           ++ LV+    Y +A     +     D A T L V  +++  LA
Sbjct: 729 MMELVNAASAYINA-----VPAAERDAALTAL-VACDIVSALA 765


>gi|221217937|ref|ZP_03589404.1| valyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192243|gb|EEE18463.1| valyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 875

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNVGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|71903844|ref|YP_280647.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|84029570|sp|Q48SL8|SYI_STRPM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71802939|gb|AAX72292.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 933

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNTKENLS---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|326335912|ref|ZP_08202089.1| ehrlichia chaffeensis immunodominant surface protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691876|gb|EGD33838.1| ehrlichia chaffeensis immunodominant surface protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 878

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 26/230 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSH----GFILHK-GEKISKSLG 308
           ++P    V   DIL F    W A ++ A      KK FS+    G +  K   K+SKSLG
Sbjct: 488 YYPTQDLVTAPDILFF----WVARMIIAGYEFAGKKPFSNVYLTGIVRDKLRRKMSKSLG 543

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  D +++I++ G D +R  L+   + G D  +D+   ++       +G  N +  +  +
Sbjct: 544 NSPDALKLIKDFGADGVRVGLLLSSSAGNDLLFDEALCQQ------GSGFANKIWNAFRL 597

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           I       IP P    +S E   S   +VL E  ++     I  AL +V  LV      +
Sbjct: 598 IKGWQTANIPQPDYAKKSIEWFKSKFQKVLNETEDDFNKYRISDALMKVYKLV------W 651

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQL----AILLQAFVPKLANKIF 474
           D    W L+   P   S +   T++ +  L      LL  F+P +  +I+
Sbjct: 652 DDFCSWLLEIVKPTFGSPIDIQTLKEVITLFENNLKLLHPFMPFITEEIW 701


>gi|331229864|ref|XP_003327597.1| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309306587|gb|EFP83178.1| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1071

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGI 358
           G+K+SKSL N  +P  +++  G D LR FL+   +  G++  + + G+K+ V+  +   +
Sbjct: 582 GKKMSKSLKNYPNPNVILDLYGADPLRLFLINSPVVRGENLRFREAGVKEVVSRVMLPWL 641

Query: 359 GN--------LVSRSVSMILKDYDGMIPTPGA-FTES--DESILSVCSRVLQEIRENMQN 407
            +         + + VS I  +YD     P A  +E+  D  +L+ C  ++Q +R  M+ 
Sbjct: 642 NSYRFFLGQVALLKKVSGIDFEYD-----PKAKLSENVMDRWVLARCQGLIQYVRAEMEA 696

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFV 466
             ++  + Q++ LV E+  ++       LK  N P+ A   L    E +  L   L +F 
Sbjct: 697 YRLYTVVPQMLDLVDELTNWYIRFNRRRLKGENGPEDAVVALNTLFETLFTLCRTLSSFT 756

Query: 467 PKLANKIFDIL 477
           P L   I+  L
Sbjct: 757 PFLTENIYQGL 767


>gi|309807047|ref|ZP_07701027.1| leucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166543|gb|EFO68742.1| leucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 804

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|296284593|ref|ZP_06862591.1| valyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 922

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ +  D  + K +P  L + G DIL F    W A +L A    
Sbjct: 486 VLDTWFSSALWPFATLGWPEKTDLLE-KHYPNSLLISGFDILFF----WDARMLMAGYFN 540

Query: 285 ----PLPKKVFSHGFI-LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               P  +K++ HG +    G K+SKS GNV+DP+ +I++ G DALR+F+    + G+D
Sbjct: 541 TGQKPW-EKLYLHGLVRAADGSKMSKSKGNVVDPLILIDQYGADALRFFMAAMESQGRD 598



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 13/76 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA +  + D++ R+ RL G D L+  G D           +AG+ T++ V++     
Sbjct: 56  HIGHALDNTLQDIVVRYERLRGKDALWVVGMD-----------HAGIATQMVVERQLEAK 104

Query: 81  RDMADVLDISYDDFIR 96
           +D     + S +DFI+
Sbjct: 105 QDKR--TNYSREDFIQ 118


>gi|167906072|ref|ZP_02493277.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 329

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 45  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 104

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 105 EAGCAPERLARECS 118


>gi|73985819|ref|XP_533856.2| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           isoform 1 [Canis familiaris]
          Length = 903

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N  + R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIEHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 16/133 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP EV+ + G+D +R +++      KD  +D       V  D   G+  
Sbjct: 638 EKMSKSKHNGVDPEEVVGQFGIDTIRLYILFAAPPEKDILWD-------VKTDALPGVLR 690

Query: 361 LVSRSVSMILK----DYDGMIPTPGAFTESDES----ILSVCSRVLQEIRENMQNQL-IH 411
              R  +++ +       GM+P P      + +    +    + V+ E+  +      ++
Sbjct: 691 WQQRLWTLVTRFIEARASGMVPRPELLRNEERAESKKLWEYKNAVISEVTGHFTEDFSLN 750

Query: 412 RALAQVISLVSEV 424
            A+AQ++ L S +
Sbjct: 751 SAIAQLMGLSSNL 763


>gi|320101257|ref|YP_004176849.1| valyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753609|gb|ADV65367.1| valyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 815

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
            W D+  + L  T Y+ NP   +  F    L   G+DI+R    Y  + L    L   P 
Sbjct: 471 TWFDSSISVLYVTHYMRNPALFEKAF-KHTLRPQGQDIIRTWLYY--SLLRVYQLTGKPA 527

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V   G  L  KGE + KS GNVIDP   IE+ G DA RY+       G D  + +  
Sbjct: 528 FKWVRITGMGLDEKGEAMHKSKGNVIDPDPFIEKYGADAFRYWAAASAKLGYDYRFSEQT 587

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           L  R     A  + N ++R +S   +      P      E D++ L+   RVL+++
Sbjct: 588 L--RTGLLFATKLWN-IARYISSFPE------PVDYELREIDKATLAYLGRVLEKV 634


>gi|312870902|ref|ZP_07731007.1| leucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872194|ref|ZP_07732267.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092278|gb|EFQ50649.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093592|gb|EFQ51931.1| leucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 804

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G       ++N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTNENIANFKNQLTQLGFSYD 118


>gi|258405242|ref|YP_003197984.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797469|gb|ACV68406.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 938

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++       D         +PADL++ G D  R  FH+    +       
Sbjct: 536 ILDVWFDSGTSFAAVVEQRDECR------YPADLYLEGTDQHRGWFHSSLLASVGTRDQA 589

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF++  +G K+SKS+GNV+ P E++++ G + LR ++  E
Sbjct: 590 PY-KTVLTHGFVVDGQGRKMSKSIGNVVAPQEIMDKYGAEILRMWVASE 637


>gi|224533275|ref|ZP_03673869.1| valyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225548893|ref|ZP_03769870.1| valyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224513440|gb|EEF83797.1| valyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225370496|gb|EEG99932.1| valyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 875

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNSENIDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|71911056|ref|YP_282606.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71853838|gb|AAZ51861.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 933

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNTKENLS---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|329118511|ref|ZP_08247215.1| valine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465246|gb|EGF11527.1| valine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 942

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 475 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 529

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G+D L
Sbjct: 530 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLDEL 574



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|309810101|ref|ZP_07703947.1| leucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169600|gb|EFO71647.1| leucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 804

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|309805058|ref|ZP_07699112.1| leucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165620|gb|EFO67849.1| leucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 804

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|254670920|emb|CBA07514.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 912

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|253574671|ref|ZP_04852011.1| leucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845717|gb|EES73725.1| leucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 813

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 19/182 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILH-KGEK 302
           K + W P DL++ G +    H +Y   W   L    +   K+ F    + G IL    EK
Sbjct: 525 KQQEWLPVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVTTKEPFQKLVNQGMILGTNNEK 584

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVI+P E++ + G D LR +         + F       K  N     GI   +
Sbjct: 585 MSKSRGNVINPDEIVNQYGADTLRVY---------EMFMGPLEATKPWNESGVEGIHRFL 635

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR   + + +   + P   A   SDE       + ++++ E+ +N   + A++Q++  V+
Sbjct: 636 SRVWRLFVAEDGSLNPKITADGGSDE-FKRTWHKTIKKVTEDFENLRFNTAISQLMIFVN 694

Query: 423 EV 424
           E 
Sbjct: 695 EA 696



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++RF R+ G +VL   G D  G    + A
Sbjct: 38  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRFKRMRGYNVLHPMGWDAFGLPAEQHA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   +    +N  NFR     L  SY  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 98  LDTGEHPRDITVKNINNFRRQIKSLGFSYDWDREISTTDPNYYKWTQWIFIQLYKKGLAY 157


>gi|148244174|ref|YP_001218868.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166231651|sp|A5CY09|SYL_VESOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146326001|dbj|BAF61144.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 815

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++RF R+ G +V+   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYSIGDVISRFQRMQGKNVMQPIGWDGFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               +   +  +N    +   + L   YD    I T   +++   + L+ K+  K  IYK
Sbjct: 92  KNKESPAKWTYKNINYMKTQLNQLGFGYDWAREITTCHPKYYRWEQWLFIKLFKKNLIYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D+    +++V  G  G   NA    ++  E   +F R++ Y ++LL+
Sbjct: 152 KKAIVNWDPVDQTVLANEQVINGR-GWRSNAL---IEKKEISQWFIRITNYAEELLN 204



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + + G +L  G K+SKS GN +DP ++I++ G D +R F++      +D  ++  GL+
Sbjct: 557 KNLLTQGMVLKNGVKMSKSKGNTVDPTKMIKKYGADTVRLFILFAAPPMQDLEWNNSGLE 616


>gi|119470852|ref|ZP_01613463.1| leucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446079|gb|EAW27358.1| leucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 862

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 2/145 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R+    L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRNQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG 144
           YK   +  +   D+    +++V  G
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG 174


>gi|298712913|emb|CBJ33425.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1060

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       +  D      +PADL++ G D  R  F +    +   + + P
Sbjct: 613 MDVWFDSGSSWAGVAKAREELD------YPADLYLEGSDQHRGWFQSSLLTSVAANGHAP 666

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             K V +HGF+L  KG K+SKSLGN +DP EVIE           G D LR ++
Sbjct: 667 Y-KTVLTHGFVLDEKGYKMSKSLGNTLDPTEVIEGGNNKKQKPAYGADVLRLWV 719



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N   HIGHA   I+ D + R+  L G  V +  G D HG  I      
Sbjct: 122 EKYVLHDGPPYANGDLHIGHALNKILKDFINRYQMLRGRKVGYVPGWDCHGLPI------ 175

Query: 65  AGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCR 107
                KV     S   R M  V L     +F R T  +   + R
Sbjct: 176 ---ELKVLQSMKSNERRGMTPVQLRKKAAEFARNTVSKQSASFR 216


>gi|291059962|gb|ADD72697.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 887

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 19/182 (10%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + Y+     YP+AQ  H+GH       D+  R+ R+ G +VL   G D  G      A  
Sbjct: 44  RAYVLDMFPYPSAQGLHVGHPEGYTATDIYCRYLRMGGYNVLHPMGFDAFGLPAENFALK 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G   +V    N   FR        SYD    I T +  ++   + L+ K+ +KG  Y+ 
Sbjct: 104 TGTHPRVSTSANCDTFRRQIQSFGFSYDWEREISTADPEYYRWTQWLFLKLYEKGLAYEA 163

Query: 123 ------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                 C S    L +E   +      GA+      +    QWM       R++AY ++L
Sbjct: 164 TAPINWCPSCKTGLANEEVRDACCERCGAEVTRRGVR----QWM------VRITAYAERL 213

Query: 177 LS 178
           LS
Sbjct: 214 LS 215


>gi|222106801|ref|YP_002547592.1| isoleucyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221737980|gb|ACM38876.1| isoleucyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 987

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 591 ILDVWFDSGCTHTFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLLESCATRGRA 644

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF + + G K+SKS+GN I P +V+ + G D LR +++
Sbjct: 645 PY-NAVITHGFTMAEDGRKMSKSIGNTISPQDVMAQSGADILRLWVM 690



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I     
Sbjct: 54  REKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDSNYVPGWDCHGLPIEWKIE 113

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDM-ADVLDISYDDFIRT----------TEKRHHDTCR 107
            K  +      +V +++  +  RD  A  + +  ++F R           T    H   R
Sbjct: 114 EKYREKGKDKNEVPINEFRQECRDFAAGWIKVQSEEFKRLGIEGDFENPYTTMNFHAEAR 173

Query: 108 ILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I  +  KI+  G +Y+G     +S+ +     + EV
Sbjct: 174 IAGELLKIAKSGQLYRGSKPIMWSVVERTALAEAEV 209


>gi|167742102|ref|ZP_02414876.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 313

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            AG   +    + S         L + +D
Sbjct: 102 EAGCAPERLARECSEAMAAQFVRLGLGHD 130


>gi|16759607|ref|NP_455224.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29142620|ref|NP_805962.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213161487|ref|ZP_03347197.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425088|ref|ZP_03357838.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|289823653|ref|ZP_06543265.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|29337027|sp|Q8Z8H5|SYL_SALTI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|25292972|pir||AC0582 leucyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501899|emb|CAD05125.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138251|gb|AAO69822.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 860

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|326389159|ref|ZP_08210739.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206390|gb|EGD57227.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 840

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 6/177 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + Y+     YP+ + HIGH     + DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 33  RPRSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKRMKGFEVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N  N +     L  + D    I T E  ++   + L+  +   G +Y+
Sbjct: 93  EKGVHPGGWTRDNIANMKAQLKRLGFALDWSREIATCEPEYYGHEQSLFIDLYQAGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D     +++V    DG+ + +    V+  +   +F +++ + D LL+
Sbjct: 153 KESAVNWDPIDHTVLANEQVI---DGRGWRSGAL-VEKRKLNQWFLKITQFADDLLN 205



 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 37/183 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E++   G DA+R+F++ +    +D  + + G++         G    
Sbjct: 617 KMSKSKKNVVDPDEIVARYGADAIRWFMLSDSPPERDLPWSEAGIE---------GCARF 667

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R +  +   YD         T  D+++     + +  +  +++    ++A+A++  L 
Sbjct: 668 VQR-LWRLFAQYDATA------TGEDKAVARKAHQTVHAVAADIEALGFNKAVARIYELT 720

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL---F 478
             ++            K  P  + +      E IR L  L+   +P LA + +  +    
Sbjct: 721 GVIE------------KAAPSASRS------EAIRMLLQLIGPMMPHLAEEAWSAMGEGL 762

Query: 479 VAD 481
           VAD
Sbjct: 763 VAD 765


>gi|302851887|ref|XP_002957466.1| hypothetical protein VOLCADRAFT_107675 [Volvox carteri f.
           nagariensis]
 gi|300257270|gb|EFJ41521.1| hypothetical protein VOLCADRAFT_107675 [Volvox carteri f.
           nagariensis]
          Length = 834

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 10/81 (12%)

Query: 264 GKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           G DIL     +W A ++   L     P    ++ HG +   KG K+SKSLGNV+DP++ I
Sbjct: 456 GHDIL----FFWVARMIMLGLEFTGQPPFSTIYLHGLVRDEKGRKMSKSLGNVVDPLDTI 511

Query: 318 EEVGVDALRYFLVREIACGKD 338
            + G DALR+ L      G+D
Sbjct: 512 AQYGTDALRFTLATGTTVGQD 532


>gi|288959465|ref|YP_003449806.1| leucyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911773|dbj|BAI73262.1| leucyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 856

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 8/182 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+ARF R  G +VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTIGDVIARFKRAKGFNVLHPMGWDAFGLPAENAAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R       L I +D  + T +  ++   + ++      G  Y 
Sbjct: 91  EKKVHPAAWTRENIATMRGQLKTMGLSIDWDREVATCDVEYYRHEQRMFLDFLKAGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  +  W  + +    N+  +    DG+ +      V+  +   +F +++AY ++LL   
Sbjct: 151 KESWVNWDPVDNTVLANEQVI----DGRGWRTGAL-VEKRKLSQWFLKITAYAEELLQGL 205

Query: 181 ES 182
           E+
Sbjct: 206 ET 207



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP  +I   G DA R F++ +    +D  + + G+         +G   
Sbjct: 615 EKMSKSKKNVVDPAHIIGTYGADAARLFMLSDSPPERDLEWTESGI---------DGAWR 665

Query: 361 LVSRSVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            ++R   M+ +          P PG+F    ++   +  + +  + E++     ++A+A+
Sbjct: 666 YINRLWRMVTEAPVELPAAGTPIPGSFGPKADAARRLVHKTIAGVSEDLDKFRFNKAVAR 725

Query: 417 VISL 420
           V  L
Sbjct: 726 VREL 729


>gi|240948306|ref|ZP_04752692.1| isoleucyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297345|gb|EER47886.1| isoleucyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 937

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYASVVEARPEFNGNSA-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 575 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 635 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 685 DRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCS 720


>gi|255554793|ref|XP_002518434.1| leucyl-tRNA synthetase, putative [Ricinus communis]
 gi|223542279|gb|EEF43821.1| leucyl-tRNA synthetase, putative [Ricinus communis]
          Length = 960

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    H+GH       D+LARF R+ G +VL   G D  G    + A
Sbjct: 101 KPKFYVLDMFPYPSGSGLHVGHPLGYTATDILARFRRMQGYNVLHPMGWDAFGLPAEQYA 160

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K+   +N   FR     L  SY  D  I T E  ++   + ++ ++  +G  Y
Sbjct: 161 IETGTHPKITTLRNINRFRSQLKSLGFSYDWDREISTIEPEYYKWTQWIFLQLLKRGLAY 220

Query: 121 KG 122
           + 
Sbjct: 221 QA 222


>gi|197106978|ref|YP_002132355.1| leucyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|254782509|sp|B4RCZ4|SYL_PHEZH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196480398|gb|ACG79926.1| leucyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 867

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ R     VL   G D  G     AA 
Sbjct: 33  KRKYYVLEMFPYPSGRLHMGHVRNYALGDVIARYKRAQDFSVLHPMGWDAFGLPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             GV  K +   N    R     L +S D   +F  T +  ++   + L+ ++ ++G +Y
Sbjct: 93  ERGVDPKAWTYDNIARMRAELKELGLSIDWSREFA-TCDVEYYGQQQALFLELFERGLVY 151

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  +      N+  V    DG+ + +   PV+  +   +F +++ Y D+L+
Sbjct: 152 RKESVVNWDPVDQTVLANEQVV----DGKGWRS-GAPVEKRKLAQWFLKITQYADQLV 204



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 37/183 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P E+ +  GVDA R F++ +    +D  +   G++             
Sbjct: 626 EKMSKSKKNTVAPEEIFDVYGVDAARLFVLSDSPPERDAQWSTSGVQG------------ 673

Query: 361 LVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCS--------RVLQEIRENMQNQLIH 411
              R V+ +  ++D    P PG    ++E++  V +        + ++ + E ++    +
Sbjct: 674 -AWRFVNRVWDEFDASEEPVPG----TEEAVTGVATDNLRRQHAKTVKAVTEAIEGFRFN 728

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A + S ++       A++P         RA  + +     +R  A+L+  F P LA 
Sbjct: 729 SAIAHLYSFLN----VLKAERP-------QGRAGALAHAHRAALRDFALLIAPFTPHLAE 777

Query: 472 KIF 474
           + +
Sbjct: 778 ECW 780


>gi|134094085|ref|YP_001099160.1| isoleucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166229743|sp|A4G3E6|SYI_HERAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|133737988|emb|CAL61033.1| isoleucine tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Herminiimonas arsenicoxydans]
          Length = 959

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T + T    L      +  F PADL++ G D  R  FH+    + +L+ + P  
Sbjct: 564 VWFDSGTTHQTV---LRGSHKEQLAF-PADLYLEGSDQHRGWFHSSLLTSSMLNGHAPY- 618

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF++  +G+K+SKS GNV+ P +V + +G D LR ++ 
Sbjct: 619 KALLTHGFVVDGEGKKMSKSKGNVVAPQKVSDSLGADILRLWVA 662



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ +  + DG D  +  G D HG  I
Sbjct: 62  KGRPKFILHDGPPYANGDIHIGHAVNKILKDMIVKTRQFDGYDAPYVPGWDCHGMPI 118


>gi|38234357|ref|NP_940124.1| valyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401320|sp|Q6NFV0|SYV_CORDI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|38200620|emb|CAE50316.1| valyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 919

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 30/198 (15%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL 280
           DP  ++  W  +     +T G+   PD +    KF+P  + V   DIL F       F  
Sbjct: 469 DPD-VLDTWFSSALWPFSTMGW---PDKTPELDKFYPTSVLVTAYDILFFWVARMMMFGT 524

Query: 281 SANLPLPK---------------KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
            A    P+                +F HG +   +G K+SKSLGN IDP++ +E  G DA
Sbjct: 525 LAGETTPEILGQGTDGRPQIPFNDLFLHGLVRDEQGRKMSKSLGNGIDPMDWVERFGADA 584

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R    G D    +D  +   N   A  + N  +   +++     G +P     T
Sbjct: 585 LRFTLARGANPGVDLPVGEDSAQSSRN--FATKLFN--ATKFALMNGAEVGTLPERSELT 640

Query: 385 ESDESILSVCSRVLQEIR 402
           ++D  IL      L+E+R
Sbjct: 641 DADRWILD----RLEEVR 654


>gi|15675414|ref|NP_269588.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533513|sp|Q99YW3|SYI_STRP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13622601|gb|AAK34309.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 933

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNTKENLS---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|218767529|ref|YP_002342041.1| leucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|14285776|sp|Q9JW39|SYL_NEIMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121051537|emb|CAM07834.1| putative leucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319409793|emb|CBY90101.1| leucyl-tRNA synthetase (leucine-tRNA ligase; LeuRS) [Neisseria
           meningitidis WUE 2594]
          Length = 910

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|325911647|ref|ZP_08174055.1| leucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476633|gb|EGC79791.1| leucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 804

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 518 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 578 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 629 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A
Sbjct: 29  KKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N  NF++    L  SYD
Sbjct: 89  IKTGRDPMDVTKENIANFKNQLTQLGFSYD 118


>gi|331703258|ref|YP_004399945.1| Valine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801813|emb|CBW53966.1| Valine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 872

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 35/214 (16%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+ + WG +IP 
Sbjct: 359 DQWFVKMDKFKNMVIDLQNSDNKINFYPNRFSDVLNRWMTDAHDWCISRQLW-WGHQIPC 417

Query: 222 --DDPQYIMYVWIDA---LTNYLTTTGYLD--------------NPDGSKAKFW----PA 258
                   MYV I+    + N+      LD              N  G +++++    P 
Sbjct: 418 WYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYFKNYFPT 477

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLGNVID 312
            + V G DI+ F    W A ++   L   K+     V  HG +  +   K+SKSLGN ID
Sbjct: 478 SVLVTGYDIIFF----WVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNGID 533

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P++VI   G D+LR FL+     G+D  Y  + +
Sbjct: 534 PMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKI 567



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA++  + D + RF +L G D LF  G D  G
Sbjct: 53 HIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSG 87


>gi|302382931|ref|YP_003818754.1| valyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193559|gb|ADL01131.1| valyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 904

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 11/110 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +  D   A+F+P    V   DI+     +W A ++   L  
Sbjct: 471 VLDTWFSSALWPFSTMGWPEKTD-DLARFYPTSDLVTAADII----FFWVARMMMMGLHF 525

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              +P K+V  +G +   KG+K+SKS GNVIDP+ +I+E+G D LR+ + 
Sbjct: 526 MDEVPFKRVIINGLVRDEKGQKMSKSKGNVIDPLVIIDELGADPLRFTMA 575



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     HIGHA    + D+LAR+HR+ G  VL+  GTD           +AG+
Sbjct: 37 SIVIPPPNVTGSLHIGHALNNTLQDILARYHRMRGKAVLWLPGTD-----------HAGI 85

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 86 ATQMVVERQ 94


>gi|241664156|ref|YP_002982516.1| leucyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240866183|gb|ACS63844.1| leucyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 877

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKGV 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+  ++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLGITKYAQELLS 210


>gi|330813399|ref|YP_004357638.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486494|gb|AEA80899.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 854

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y      YP+ + H+GH     + DV+A F RL+G +VL   G D  G     A
Sbjct: 31  KTKKKFYCLEMFPYPSGKIHMGHVRNYTLGDVVANFKRLNGFNVLHPMGWDSFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A    +  K + + N +  +    +L  S D
Sbjct: 91  AIQNKLHPKDWTNSNIQTMKSQLKLLGFSID 121



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 51/270 (18%), Positives = 109/270 (40%), Gaps = 66/270 (24%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-------KKVFSHGFILHKG 300
           D   AK+W P D ++ G +    H +Y   F  + +L          K +F+ G + HK 
Sbjct: 521 DLDDAKYWMPVDQYIGGVEHAILHLLYSRFFSRAISLKTKYEIKEPFKGLFTQGMVCHKT 580

Query: 301 ----------------------EKISKS-------------LGNVIDPIEVIEEVGVDAL 325
                                 EK SK                NV+DP  VI+  G DA+
Sbjct: 581 FKTEDGQWVYPEDVVEENGNTFEKTSKKKIVVGSSESMSKSKKNVVDPQSVIDIYGADAV 640

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+F++ +    +D  + ++G+          G    + + V ++ +    +  T     +
Sbjct: 641 RWFMLSDSPPERDIQWSEEGIV---------GCHKFIQK-VWLMTEMIQSISDTTRISKD 690

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
               +  + ++ ++EI  N+++   + A+A+    V+  +++        +   N DR  
Sbjct: 691 KKLELKKLINKCIKEITLNIEHFHFNVAVAKFYEFVNSFNKH--------IINENCDRDE 742

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                 + ++++  +L+  F+P LA++I++
Sbjct: 743 -----FISIVKKFVVLIYPFIPHLASEIWE 767


>gi|254292383|ref|YP_003058406.1| leucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254040914|gb|ACT57709.1| leucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 860

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+ + H+GH     + DV+ARFH  +G +VL   G D  G     AA   
Sbjct: 37  KAYVLEMFPYPSGRLHMGHVRNYAMGDVVARFHISNGYNVLHPMGWDAFGMPAENAAMEK 96

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           G    V+  +N    ++    L +S D       KR   TC
Sbjct: 97  GAQPGVWTHENIDAMKEQFSPLGLSLD------WKREFATC 131


>gi|213852378|ref|ZP_03381910.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 684

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQV---IDGCCWRCD-TKVERKEIPQWFIKITAYADELL 203


>gi|167914393|ref|ZP_02501484.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 326

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            AG   +    + S         L + +D
Sbjct: 102 EAGCAPERLARECSEAMAAQFVRLGLGHD 130


>gi|118463457|ref|YP_880951.1| valyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118164744|gb|ABK65641.1| valyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 882

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 32/181 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                     +P    VF HG 
Sbjct: 477 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGDDDAITLDGRRGPQVPF-TDVFLHGL 531

Query: 296 IL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--A 352
           I    G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D ++   N   
Sbjct: 532 IRDESGRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAIGEDHVRASRNFCT 591

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            L N     +     +        +P     T++D  IL     V  E+     N    R
Sbjct: 592 KLFNATRYALLNGAQL------AQLPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSR 645

Query: 413 A 413
           A
Sbjct: 646 A 646


>gi|262374949|ref|ZP_06068183.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309962|gb|EEY91091.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 873

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 12/175 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  + YI +   YP+ + H+GH     I DV++RFHRL G  VL   G D  G     AA
Sbjct: 35  EGPRRYILSMFPYPSGKLHMGHVRNYTIGDVISRFHRLKGETVLQPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L ++  +D    T    ++   + L+ ++  KG IY
Sbjct: 95  IAHQVAPAKWTFENIAYMRDQLKKLGLAVDWDREFATCTPEYYRWEQWLFVQLYKKGLIY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 RKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 202


>gi|27904876|ref|NP_778002.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29427406|sp|P59433|SYL_BUCBP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27904274|gb|AAO27107.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 861

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y    I YP+ + H+GH     I+DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLAMIPYPSGKLHMGHVRNYTISDVIARYQRMLGKNVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                   +  +N +  +     L +SYD
Sbjct: 92  KNNTHPAQWTYENIKYMKQQLISLGLSYD 120


>gi|313902198|ref|ZP_07835606.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467533|gb|EFR63039.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 868

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 30/208 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL-----SANLPLP---KKVFSHGFILHK 299
           D  K  +W P D ++ G +    H +Y   F+         +P P   +++ + G ++  
Sbjct: 524 DREKVFYWLPVDQYIGGIEHAVLHLLY-SRFITKVLYDEGLVPSPEPFQRLLTQGMVIKD 582

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNAD 353
           G K+SKS GNV+ P +++EE G DA R F++      R++   + G         RV   
Sbjct: 583 GAKMSKSKGNVVSPEDILEEYGADATRLFILFAAPPERDLEWSEHGIEGASRFVHRV-WR 641

Query: 354 LANGIGNLVSRSVSMILKDYDGM-------IPTPGA----FTESDESILSVCSRVLQEIR 402
           L  G    +  +   +    DG        +P P A       +D  ++ V      E  
Sbjct: 642 LVAGCAGAIRGATGQVAAARDGAVAVPRPEVPQPPAGGRQAAAADAGVMPVTEGWGPE-- 699

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDA 430
           E+   + +HRA+A+V + ++E  +Y  A
Sbjct: 700 EHALWREVHRAIARVTADMAERMQYNTA 727



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 6/171 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+ + H+GH     I D  ARF+R+ G +VL+  G D  G     AA 
Sbjct: 36  RPKYYCLEMYPYPSGKLHMGHVRNYSIGDATARFYRMRGFNVLYPMGWDSFGLPAENAAI 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    R+    L +SYD    I  +   ++   + L+  +  +G + +
Sbjct: 96  ANQTHPARWTYANIAAMREQMQRLGLSYDWRREIACSHPGYYKWTQWLFLLLYKRGLVER 155

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                 +  R      +++V    DG  +     PV+  E E +FF+++AY
Sbjct: 156 KKAPVNWCPRCATVLANEQV---EDGTCWRC-GTPVEKRELEQWFFKITAY 202


>gi|308183700|ref|YP_003927827.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065885|gb|ADO07777.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 806

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+  
Sbjct: 90  GIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    +G+ +      VQ  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---INGRCWRCDTEVVQ-KELYQYYLKITNYAEELLKDLET 204



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKNGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNL 361
           GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I   
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAITPT 636

Query: 362 VSR 364
            S+
Sbjct: 637 TSK 639


>gi|157364698|ref|YP_001471465.1| leucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|172045994|sp|A8F8B7|SYL_THELT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157315302|gb|ABV34401.1| leucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 815

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 52/268 (19%)

Query: 233 DALTNYLTTTGYL---DNPDGSKAKF-------W-PADLHVIGKDILRFHAIY------- 274
           D +  ++ ++ Y     NPD     F       W P D +V G +    H +Y       
Sbjct: 489 DTMDTFVDSSWYFLRYVNPDRDDVPFVKEDVDHWLPVDQYVGGVEHAVLHLLYSRFITKV 548

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +    LS + P  + +F+ G I   G K+SKS GNV+ P E+I+  G D LR +++   
Sbjct: 549 LYDLGYLSFDEPF-ENLFTQGMIYKDGAKMSKSKGNVVSPDEMIDRYGADTLRMYILFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDES 389
              +D  ++  G++         G+   + R+ S++    D +I  P      F E ++ 
Sbjct: 608 PPERDAEWNDAGIE---------GVYRFIRRAWSLM----DQIISLPDNQNQVFAEEEKH 654

Query: 390 ILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFD--AQKPWELKKTNPDRAST 446
           +       L+++ ++M+     +  ++ ++ LV++   Y D   Q  W +K         
Sbjct: 655 LRRKLHISLRKVTQDMEGGFKFNTVVSSLMELVNDAYDYIDNLPQHRWNIK--------- 705

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIF 474
              +  E+ +   +++  F P  A +++
Sbjct: 706 ---LLKELAKNFVLMISPFAPHFAEELW 730



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 6/174 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+   H+GH    +I D +AR+ R+   +VL   G D  G     AA   
Sbjct: 33  KYYMLVMFPYPSGTLHVGHVKNYVIGDAVARYKRMRAYNVLHPFGYDAFGLPAENAAIER 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +   N    R     L ISYD    + T  + ++     ++ K+ + G  YK  
Sbjct: 93  KIHPKDWTLNNINIIRRQIKKLGISYDWNREVITCLESYYKWTEWIFLKLYEAGLAYKKK 152

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +  +  +      +++V    DG+       PV     E +FF+++ Y ++LL
Sbjct: 153 AAVNWCPKCMTSLANEQV---KDGRCERCD-TPVTIKHLEQWFFKITDYAERLL 202


>gi|90416602|ref|ZP_01224533.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331801|gb|EAS47029.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 940

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PADL++ G D  R  F +    A  ++   P  K V +HGF + + G K+SKS+GNVI 
Sbjct: 559 YPADLYLEGSDQHRGWFQSSLKTAIAINGTAPY-KAVLTHGFTVDEHGRKMSKSIGNVIS 617

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +VI ++G D LR ++ 
Sbjct: 618 PQKVINDMGADVLRLWIA 635



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           RE+  +     Y N + H+GHA    + D++ +   + G D  +  G D HG      + 
Sbjct: 48  REQYILHDGPPYANGEIHLGHAVNKTLKDIIVKARTMSGYDAPYIPGWDCHGLPIEHNVE 107

Query: 60  KAAQNAGV 67
           K    AGV
Sbjct: 108 KKVGKAGV 115


>gi|300814550|ref|ZP_07094804.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511318|gb|EFK38564.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 803

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 15/182 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK+Y+     YP+ Q  H+GH       D++AR  R  G +VLF  G D  G      
Sbjct: 30  DREKIYLLVEFPYPSGQGLHVGHPRPYTALDIVARKRRYQGYNVLFPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   QN ++F++    +  S+D    I TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNKIHPAIVTKQNIKHFKEQLKSIGFSFDWSREINTTDPEYYKWTQWIFLQLYKHGLA 149

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           YK      W         N++ +  G   +  N +       QWM       +++AY D+
Sbjct: 150 YKKESPINWCPSCKTGLANEEVI--GGKCERCNTEVVRRVKSQWM------LKITAYADR 201

Query: 176 LL 177
           L+
Sbjct: 202 LI 203



 Score = 43.9 bits (102), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 30/180 (16%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEKISK 305
           +W P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+SK
Sbjct: 525 YWTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYVKRTSHGMILGENNEKMSK 584

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR- 364
           S GNV++P +++ + G D LR + +      K   + + G++         G    + R 
Sbjct: 585 SRGNVVNPDDIVHDYGADTLRTYEMFIGDFEKPVPWMETGVR---------GCRRFLDRV 635

Query: 365 -SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            ++S IL D D        ++ES E ++    + ++++  + +N   + A+A ++SL++E
Sbjct: 636 WNLSDILVDGD-------KYSESLEKLI---HKTIKKVSYDYENLKANTAIAALMSLLNE 685


>gi|291277218|ref|YP_003516990.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964412|emb|CBG40262.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 806

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 20/182 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I D +AR +R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGALHMGHVRNYCIGDAMARHYRKQGFNVLHPIGFDAFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------ISDKG 117
           G   K +   N          L  S+      + +R   TC  L+ K        +  KG
Sbjct: 92  GAHPKEWTYSNIEAMHKEFKSLGFSF------SRERSFATCDPLYTKWEQEFFIDMWQKG 145

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            +Y K  +  W   +D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++L
Sbjct: 146 LVYRKKAFLNWCP-KDQTVLANEQV---VDGKCWRCDTEIIQ-KEMVQYYIKITDYAEEL 200

Query: 177 LS 178
           L+
Sbjct: 201 LA 202



 Score = 43.9 bits (102), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L +G K+SKSLGNVI+P  +I++ G D  R F++
Sbjct: 560 LLTQGMVLKEGRKMSKSLGNVIEPHAIIQKYGSDTARLFVL 600


>gi|282897916|ref|ZP_06305911.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197060|gb|EFA71961.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 859

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 39/91 (42%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 34  KNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A + GV    +  QN    R     L +S D
Sbjct: 94  AIDRGVPPAKWTYQNINQMRQQLQRLGLSLD 124



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 43/212 (20%)

Query: 298 HKGEKI-------SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           H GE +       SKS GN + P +VI + GVD  R F++ +   GKD  +D+       
Sbjct: 609 HTGEPLQRLYATMSKSKGNGVAPEDVIAKYGVDTARMFILFKAPPGKDLEWDE------- 661

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            AD+  G    ++R V  ++ DY  M                VC + +   +   + + +
Sbjct: 662 -ADV-EGQFRFLNR-VWRLVNDYANM---------------GVCGKKVDLEKLTREEKDL 703

Query: 411 HRALAQVISLVSE--VDRY-FDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465
            RA+   I  ++E   D Y F+      +K +N   D       V  E I+ L I+L  F
Sbjct: 704 RRAVHSGIKAITEDVEDEYQFNTAISELMKLSNALSDAKCHNSPVYAEGIKTLVIMLAPF 763

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
            P +A++++++L     N+   S+ Q+  PGF
Sbjct: 764 APHIADELWNLL----GNKS--SVHQQGWPGF 789


>gi|269467856|gb|EEZ79599.1| valyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 915

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 68/325 (20%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWP 257
           FV + LK+   +++    G K+  D + ++  W  +     +T G+ D  P+ S+  F+P
Sbjct: 423 FVANSLKE---AQEQAGEGTKLRQD-EDVLDTWFSSALWPFSTLGWPDKTPELSR--FYP 476

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIE 315
            D+ V G DI+ F       F L     +P K V+  G I   +G+K+SKS GNV+DPI+
Sbjct: 477 TDVLVTGFDIIFFWVARMIMFGLKFTGEVPFKDVYITGLIKDGQGQKMSKSKGNVLDPID 536

Query: 316 VIEEV-------------------------------------GVDALRYFLVREIACGKD 338
           +I+ +                                     G DALR+      + G+D
Sbjct: 537 LIDGISLEDLLTKRTQGMMQPKMAEKIKKQTKQEFADGIPAFGTDALRFTFAALASFGRD 596

Query: 339 GFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
             +D     KRV    +  N + N  SR V M L+     I T  + + +DE ILS    
Sbjct: 597 IKFD----LKRVEGYRNFCNKLWN-ASRFVLMKLEGE--AINTNASLSIADEWILS---- 645

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYV 450
            LQ  + N++  L    L  +   + E       D Y +  KP  + ++        L  
Sbjct: 646 RLQATKVNVEKHLSDYRLDLMSHELYEFVWHDYCDWYLELSKPLLVNESTKAGTQATL-- 703

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
            V+V+ ++  LL   +P +  +I++
Sbjct: 704 -VKVLDEMITLLHPIIPFITEEIYE 727



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAKAAQNAGVTTKV 71
           H+GHA++  I DVL R+HR  G   L+  GTD  G         Q  A+      V  + 
Sbjct: 50  HMGHAFQHTIMDVLTRYHRGKGEQTLWQPGTDHAGIATQMVVERQLAAQDITRHDVGREK 109

Query: 72  FVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+            +   R +   +D   + F  T ++   D  + ++ ++ D+G IY
Sbjct: 110 FIDKIWDWKEQSGGTITSQMRRLGASVDWERERF--TMDEGLSDAVKKVFVQLHDEGLIY 167

Query: 121 KG 122
           +G
Sbjct: 168 RG 169


>gi|254774539|ref|ZP_05216055.1| valyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 882

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 32/181 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                     +P    VF HG 
Sbjct: 477 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGDDDAITLDGRRGPQVPF-TDVFLHGL 531

Query: 296 IL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--A 352
           I    G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D ++   N   
Sbjct: 532 IRDESGRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAIGEDHVRASRNFCT 591

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            L N     +     +        +P     T++D  IL     V  E+     N    R
Sbjct: 592 KLFNATRYALLNGAQL------AQLPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSR 645

Query: 413 A 413
           A
Sbjct: 646 A 646


>gi|167819286|ref|ZP_02450966.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 328

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 45  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 104

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            AG   +    + S         L + +D
Sbjct: 105 EAGCAPERLARECSEAMAAQFVRLGLGHD 133


>gi|225549897|ref|ZP_03770858.1| valyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369356|gb|EEG98808.1| valyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 875

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNSENIDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|312898858|ref|ZP_07758246.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620020|gb|EFQ03592.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 827

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 8/168 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R++G +VL   G D  G     AA    +
Sbjct: 35  YVLEMFPYPSGNLHMGHVRNYTIGDVIARYRRMNGYNVLHPMGFDAFGMPAENAAIKRNI 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY-KGCY 124
               +   N  N       L +SY  D  + T  K ++   + +++ +  +G  Y K   
Sbjct: 95  PPAEWTYDNIANMERQQKSLGLSYDWDREVATCHKDYYRWTQWIFELLYKRGLAYRKEAK 154

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             W    +    N+  +    DG+ +   H+ V+  + + +FF+++ Y
Sbjct: 155 VNWCDTCNTVLANEQVI----DGKCWRCDHDVVK-KDLKQWFFKITDY 197



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A L+ A+ P  +++ + G +L +G K+SKS GNV+ P E++ + G D  R F++      
Sbjct: 557 AGLVEASEPF-ERLLTQGMVLKEGSKMSKSKGNVVSPEEILSKYGADTARLFILFAAPPE 615

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G++            N V R V            +   ++E+D+++  V   
Sbjct: 616 RDLDWSDKGVEGSYR------FLNRVWRIVHQFADIAKTAEVSKDIYSEADKALRLVEYT 669

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + +I +++Q    + AL   +S V E   + +A   +       D+      V  E   
Sbjct: 670 SVAKITDDIQGDDGNYALNTAVSAVME---FVNAMHAY----VGEDKGQLHADVADEANE 722

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  LL  F P +A +++ I+
Sbjct: 723 NLLRLLAPFTPHIAEELWSII 743


>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 921

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 10/108 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++          +  +    PADL++ G D  R  F++    A  ++ 
Sbjct: 521 QDIMDVWFDSGSSHQAVL------EEREDLVRPADLYLEGSDQYRGWFNSSLSTAVAVTG 574

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K V SHGF L  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 575 KAPY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV 621



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTK 70
             +N  V  K
Sbjct: 105 LTKNKKVNRK 114


>gi|288870475|ref|ZP_06114220.2| leucine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288867057|gb|EFC99355.1| leucine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 535

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 11/92 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK 299
           D  K K+W P D +  G + +  H IY   W  FL    L     P  K+  + G IL  
Sbjct: 252 DPEKLKYWMPVDWYNGGMEHVTRHMIYSRFWHHFLYDMGLVNTEEPYAKRT-AQGLILGP 310

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            G+K+SKS GNV+DP++V+EE G D LR +++
Sbjct: 311 DGDKMSKSKGNVVDPLDVVEEFGADVLRTYVL 342


>gi|184200760|ref|YP_001854967.1| valyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580990|dbj|BAG29461.1| valyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 861

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 14/175 (8%)

Query: 254 KFWPADLHVIGKDILR---FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           K +P DL   G DI+R   F  +   A  L+  +P      S   +    +K+SKS GNV
Sbjct: 529 KTFPMDLRPQGHDIIRTWLFSTVV-RAETLAGTVPWTNTALSGWILDPDRKKMSKSKGNV 587

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSV-- 366
           + P +V+E+ G DA+RY+       G D  YD+  +K  +R+   L N    ++++ V  
Sbjct: 588 VVPTDVLEKYGADAVRYWAA-SARLGADTAYDEGQMKIGRRLAIKLLNASKFVLAQGVTE 646

Query: 367 -SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S++    D  + T G     D S+L+  + V++      +     RAL  + S 
Sbjct: 647 ASVLGSGTDASVVTNGL----DRSLLAQLATVVERATAAFREYEYARALQLIESF 697



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3  EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          +RE +Y I T     +   H+GH +     DV+ARF R+ G +V +  G D++G    + 
Sbjct: 33 DRESVYSIDTPPPTASGSLHVGHMFSYTQTDVIARFQRMSGKNVFYPLGWDDNGLPTERR 92

Query: 62 AQN 64
           QN
Sbjct: 93 VQN 95


>gi|170590117|ref|XP_001899819.1| protein ZK524.3 [Brugia malayi]
 gi|158592738|gb|EDP31335.1| protein ZK524.3, putative [Brugia malayi]
          Length = 878

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI +   YP+ + H+GH     I+DVLAR++RL+G +V+   G D  G     AA+
Sbjct: 65  RPKKYILSMYPYPSGRLHMGHMRVYTISDVLARYYRLNGYNVIHPIGWDAFGLPAENAAR 124

Query: 64  NAGVTTKVFVDQN 76
             GV    +   N
Sbjct: 125 EVGVDPAQWTANN 137


>gi|126731544|ref|ZP_01747350.1| isoleucyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126708080|gb|EBA07140.1| isoleucyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 998

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +       D  DGSK     ADL++ G D  R  FH+    A       
Sbjct: 605 VLDVWFDSGSTHAFV--LRDREDGSKDGL--ADLYLEGTDQHRGWFHSSMLQACGTRGRA 660

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKSLGN + P +V ++ G D LR ++ +
Sbjct: 661 PY-RGVLTHGFTLDEKGNKMSKSLGNTVAPEDVTKQYGADILRLWVAQ 707



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           RE   +     Y N   HIGHA   ++ D + R  ++ G D  +  G D HG  I
Sbjct: 58  RESFTLHDGPPYANGHLHIGHALNKVLKDFIVRSQQMMGRDARYIPGWDCHGLPI 112


>gi|15639574|ref|NP_219024.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025813|ref|YP_001933585.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094405|sp|O83595|SYL_TREPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695266|sp|B2S3H7|SYL_TREPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3322882|gb|AAC65562.1| leucyl-tRNA synthetase (leuS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018388|gb|ACD71006.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 878

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 19/182 (10%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + Y+     YP+AQ  H+GH       D+  R+ R+ G +VL   G D  G      A  
Sbjct: 35  RAYVLDMFPYPSAQGLHVGHPEGYTATDIYCRYLRMGGYNVLHPMGFDAFGLPAENFALK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G   +V    N   FR        SYD    I T +  ++   + L+ K+ +KG  Y+ 
Sbjct: 95  TGTHPRVSTSANCDTFRRQIQSFGFSYDWEREISTADPEYYRWTQWLFLKLYEKGLAYEA 154

Query: 123 ------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                 C S    L +E   +      GA+      +    QWM       R++AY ++L
Sbjct: 155 TAPINWCPSCKTGLANEEVRDACCERCGAEVTRRGVR----QWM------VRITAYAERL 204

Query: 177 LS 178
           LS
Sbjct: 205 LS 206


>gi|189502590|ref|YP_001958307.1| valyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|254783549|sp|B3ETM6|SYV_AMOA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189498031|gb|ACE06578.1| hypothetical protein Aasi_1256 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 877

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 35/254 (13%)

Query: 247 NPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK 299
           NP+    + F+P  + V   +I+ F    W A ++ A       LP  K V+  G +  K
Sbjct: 475 NPENQDIQYFYPTQVLVTAPEIIFF----WVARMIMAGYAFTNRLPF-KHVYFTGIVRDK 529

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKSLGN  +PI++I++ G D +R  ++     G D  +D    ++  N   AN I
Sbjct: 530 LGKKMSKSLGNSPEPIDLIKQYGADGVRVGMLFSSPAGNDLLFDIKLCEQGRN--FANKI 587

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESIL-----SVCSRVLQEIRENMQNQLIHRA 413
            N        ++K ++         ++ D+++      +  ++VL  I E+ +   I  A
Sbjct: 588 WNAFR-----LIKGWE----VQAKSSQPDDTMAINWFEARFNQVLTTIEEHFEQFRISDA 638

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  L+ +     Y +  KP   +  +P    T    TVE + +L  +L  F+P +  
Sbjct: 639 LMSIYKLIWDDFCAWYLEMVKPAYGEPISP----TTYAATVEFLAKLLKILHPFMPFITE 694

Query: 472 KIFDILFVADENRC 485
           +++  L       C
Sbjct: 695 EVWHQLQPRSAQDC 708


>gi|15603527|ref|NP_246601.1| isoleucyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81636547|sp|Q9CKF7|SYI_PASMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12722068|gb|AAK03746.1| IleS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 932

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 27/214 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           IK+PD     + VW D+ + Y +     D P+ +  +   AD+++ G D  R    +  +
Sbjct: 526 IKVPD----TLDVWFDSGSTYYSVVK--DRPEFNGQE---ADMYLEGSDQHR--GWFMSS 574

Query: 278 FLLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++    
Sbjct: 575 LMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTD 634

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
             G+    D+  + KR  AD    I N    +   +L + +G  P      P      D 
Sbjct: 635 YTGEISVSDE--ILKRA-ADAYRRIRN----TARFLLANLNGFDPKRDLVKPEEMMVLDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +    +   EI++   N   H  + +++   S
Sbjct: 688 WAVDCAYQAQNEIKDAYDNYQFHAVIQRLMKFCS 721


>gi|297621535|ref|YP_003709672.1| Valyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376836|gb|ADI38666.1| Valyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 948

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 157/425 (36%), Gaps = 98/425 (23%)

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
            Y    E Y    G  Y ++     ++ ++ +F ++S +  +L    +     ++P   +
Sbjct: 332 GYLEKVEPYTNRVGVSYRSKATIEPYLSKQ-WFVKMSHFAPRLREIVQEEIVSLIPRNWQ 390

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMY------------------- 229
           N    ++   L+D  +SR+ + WG +IP     D+P  ++                    
Sbjct: 391 NTYFHWI-DNLRDWCISRQLW-WGHRIPIWYHKDNPDRVICYEGDGTPPEVEAEPDKWEQ 448

Query: 230 ------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF------------- 270
                  W  +     +T G+  N      KF+P    V G DIL F             
Sbjct: 449 DPDVLDTWFSSALWPFSTLGW-PNKTEELEKFYPNSAMVCGHDILFFWVARMIMMGEHLF 507

Query: 271 ----------HAI-----YWP----------------AFLLSANLPLPKKVFSHGFILHK 299
                     H++     YW                 AF L    P+PK V S      K
Sbjct: 508 EKAPFPEVYLHSLIFGKSYWRKDAGGGVQYCDEKERIAFDLGTK-PVPKDVES------K 560

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GN+IDP+E+IE+ G DA+R  L    +  +    D D  K     + AN I 
Sbjct: 561 WEKMSKSKGNIIDPLEIIEDYGTDAMRMALCS--SASQAWQIDLDRRKFEEFKNFANKIW 618

Query: 360 NLVSRSVSMILKDYDGMIPT-------PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           N  +R + M L   D +              T  D+ ILS  S+ ++++  N+ N    +
Sbjct: 619 N-GARFIFMNLDANDPLNSKQLSEGLDESRLTLEDQWILSSLSKTVEDVNFNLSNYQFDQ 677

Query: 413 ALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           A  +            Y +  KP    K+ +P+       + V V+ Q   L+    P +
Sbjct: 678 AATRAYDFYWNEFCAYYLEIAKPVLFGKQGSPEERKNKQKLLVIVLLQALRLIHPMAPFI 737

Query: 470 ANKIF 474
             ++F
Sbjct: 738 TEELF 742



 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 39/122 (31%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I DVL R+ R+ G +VL+  GTD           +AG+ T+  V+++    
Sbjct: 53  HMGHALGSTIDDVLVRWKRMSGFEVLWVPGTD-----------HAGIATQTVVERH---- 97

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCR-----ILWK-KISDKGDIYK-----GCYSGWYS 129
                         ++T  KR  D  R     ++W+ K  ++G I       GC   W  
Sbjct: 98  -------------LMKTQGKRRGDFKREAFLKLVWEWKEKNEGRILSQLKKLGCSCDWSR 144

Query: 130 LR 131
           LR
Sbjct: 145 LR 146


>gi|294789076|ref|ZP_06754315.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482817|gb|EFG30505.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 927

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 58/291 (19%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     M VW D+ + + +     D          PADL++ G D    H  ++ + 
Sbjct: 528 KLPD----TMDVWFDSGSTHYSVLKQRDELAH------PADLYLEGSDQ---HRGWFQSS 574

Query: 279 LLSANLPLP----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-- 331
           +L+    L     K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +     
Sbjct: 575 MLTGCATLGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAANTD 634

Query: 332 ---EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD- 387
              E+A  K+       + +R+   L+    N         LKD++   P   A  ++D 
Sbjct: 635 YSGELAISKEILKRVTEIYRRIRNTLSFLFAN---------LKDFN---PIEDAIPQADM 682

Query: 388 ---ESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE----------VDRYFDAQK 432
              +    V +R LQE    E       H A+ +++   SE           DR +  + 
Sbjct: 683 VEIDRYALVLARQLQEKLAGEYYPRYAFHFAVQELVQFCSEDLGAFYLDILKDRLYTTKA 742

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +++    A T LY    + R L +L+   +   A + ++++   +E+
Sbjct: 743 NSHARRS----AQTALY---HITRSLVLLMSPILCFTAEEAWELIGGGEED 786



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|209559678|ref|YP_002286150.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540879|gb|ACI61455.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 918

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 509 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 562

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 563 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 608



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 43  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 102

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 103 AEYLEMCRQYALSQVDKQRNDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 160

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 161 IYRGAKPVYWSWSSESALAEAEI 183


>gi|139473464|ref|YP_001128180.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271711|emb|CAM29944.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|327310520|ref|YP_004337417.1| isoleucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946999|gb|AEA12105.1| isoleucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 959

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 29/305 (9%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y+  VW+D+   ++       N D  +A  +P        D  R  F+++   + + +  
Sbjct: 502 YVADVWMDSGIAWIAAVDGERNRDLWEA-LYPFTWVTEAIDQTRGWFYSLLATSMVYTGR 560

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K +   G IL K G+K+SKS GNV+   +++ + G D  R +L+ + A  +   +D
Sbjct: 561 APY-KSILITGHILDKEGQKMSKSKGNVVWAKDLLSKYGADPTRLYLLTKAAPWEALNFD 619

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-------GAFTESDESILSVCS 395
            D +K  V+    N + N+V  + + +    DG  P         G   + D+ +LS  S
Sbjct: 620 PDEIKYAVSQ--LNILWNVVKFADTYM--SLDGFDPRRHRLEELLGKALDEDKWLLSAAS 675

Query: 396 RVLQEIRENMQNQLIHRALAQ----VISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYV 450
            + + + E+M+   IH A       V+  +S        ++ W E  + +   A  VL+ 
Sbjct: 676 SLARRVAEHMEAFEIHEAAKAWVDFVVETLSHRYVRLLRRRVWSEEPREDKYAAYAVLF- 734

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFM---LHKTFDP 505
             +V++ + I+   FVP +A  ++       E    +S  L Q  +PG +   L K FD 
Sbjct: 735 --KVLKDVLIIGGIFVPHIAEYLWQNFVRKYEPDAAESVHLAQYPEPGPVDEELLKAFDE 792

Query: 506 IFPRF 510
           IF  F
Sbjct: 793 IFKVF 797


>gi|259417786|ref|ZP_05741705.1| isoleucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346692|gb|EEW58506.1| isoleucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 989

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 11/121 (9%)

Query: 217 GIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FH 271
           GI  PD+ + +   + VW D+ + +       D  DG+K     AD+++ G D  R  FH
Sbjct: 582 GIVNPDEYEQVFDVLDVWFDSGSTHAFV--LRDREDGTKDGI--ADVYMEGTDQHRGWFH 637

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +    A       P  + V +HGF L  KG K+SKSLGN I P E++++ G D LR ++ 
Sbjct: 638 SSLLQASATKGRAPY-RNVVTHGFTLDEKGMKMSKSLGNTIVPEEIVKQYGADILRLWVA 696

Query: 331 R 331
           +
Sbjct: 697 Q 697



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG        
Sbjct: 55  RQPFVLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDSRYVPGWDCHGLPIEWKIE 114

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++  K  +N      +   Q  R F +    +DI  ++F R
Sbjct: 115 EQYRKKGKNKDAVPVIEFRQECRKFAE--GWIDIQREEFKR 153


>gi|255037842|ref|YP_003088463.1| valyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950598|gb|ACT95298.1| valyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 880

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 29/301 (9%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
           I  DP  ++  W  +    ++    +  PD  +  ++ P +  V   +IL F    W A 
Sbjct: 454 ITQDPD-VLDTWFSSWLWPISVFNGIKEPDNEEVNYYYPTNDLVTAPEILFF----WVAR 508

Query: 279 LLSA------NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++ A        P  K V+  G +  K G K+SKSLGN  DPI++IE+ G D++R  ++ 
Sbjct: 509 MIIAGYEYRGQYPF-KNVYLTGIVRDKQGRKMSKSLGNSPDPIDLIEKYGADSIRTGMLF 567

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESI 390
               G D  YD+  +++  N       GN +  +  ++     D  +P P     + +  
Sbjct: 568 SSQAGNDLPYDEKLIEQGRN------FGNKIWNAFRLVKGWTVDSELPVPEGSKLAVQWF 621

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
            S  ++ L E++++     I  AL  V  L+ +    +Y +  KP       P   ST  
Sbjct: 622 ESKLNQTLAEVQDHFSKFRISDALNSVYKLIWDDFCAQYLEMIKP---GFEQPIDLST-Y 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGFMLHKTFDPI 506
             T++   +   LL  F+P ++ +I+  +    E    C     Q  +    L   FD +
Sbjct: 678 DSTLDFFDRQMRLLHPFMPFISEEIWQNIIERGEKESICIAHFPQAAEFDQSLLNDFDIL 737

Query: 507 F 507
           F
Sbjct: 738 F 738


>gi|305680899|ref|ZP_07403706.1| valine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659104|gb|EFM48604.1| valine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 882

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 93/233 (39%), Gaps = 46/233 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 408 MHDWTISRQLW-WGHRIPIWYGPDGEVVCLGPDDEVPEGYTQDPD-VLDTWFSSALWPFS 465

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK------------ 288
           T G+ +       KF+P  + V   DIL F       F   A L  P+            
Sbjct: 466 TMGWPEKTP-ELEKFYPTSVLVTAYDILFFWVARMMMFGTFAGLTTPEILGSGRDGRPQI 524

Query: 289 ---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               +F HG +  + G K+SKSLGN IDP++ + E G DALR+ L R    G D     D
Sbjct: 525 PFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVAEYGADALRFTLARGSNPGVDLPLGAD 584

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             +   N   A  + N  +   +++   +   IP     T++D+ IL    +V
Sbjct: 585 AAQSSRN--FATKLFN--ATRFALMNGAHVAGIPDAADLTDADKWILGRLEQV 633



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 26/174 (14%)

Query: 6   KLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI- 58
           K   S  +  PN   Q H+GHA +  + D +AR  R+ G +VL+  G D  G     K+ 
Sbjct: 41  KPAFSIVLPPPNVTGQLHMGHALDHTLMDAIARRKRMQGYEVLWLPGMDHAGIATQSKVE 100

Query: 59  AKAAQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           A+  +  G T                 + F        R + D +D S + F  T ++  
Sbjct: 101 ARLKETEGKTRWDYSREEFIAKVWEWKREFGGTIGEQMRAIGDSVDWSRERF--TLDEGL 158

Query: 103 HDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
               + ++K++ D+G IY+      W  + + A  + + VYK  DG+  + ++ 
Sbjct: 159 SRAVQTIFKQLYDRGLIYRAHRLINWSPVLETAVSDIEVVYKDVDGELVSIRYG 212


>gi|163781826|ref|ZP_02176826.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883046|gb|EDP76550.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 940

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 117/274 (42%), Gaps = 43/274 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++ +       P G    F  AD+++ G D  R  F A    +     + 
Sbjct: 542 ILDVWFDSGCSHASVI----RPLG----FERADMYLEGSDQHRGWFQASLLESVGSYGSA 593

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF +  KG K+SKSLGNV+ P E+IE+ G D LR ++V E        Y +
Sbjct: 594 PY-RSVLTHGFTVDEKGRKMSKSLGNVVAPQEIIEKYGADILRLWVVSED-------YSE 645

Query: 344 D----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVC 394
           D    G   R   D    I N    ++  +L +    +P+      S     D  +LS  
Sbjct: 646 DVKLGGSIIRSLVDDYRKIRN----TLRFLLGNLYDFVPSRDRVDVSELHHFDRWMLSHL 701

Query: 395 SRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKKTNPD-----RASTV 447
             VL E+  + +N   HR   L +     +    Y D  K   L   +PD      A TV
Sbjct: 702 QGVLSELHRHYENYTFHRVYHLIRNFCTTTLSSLYLDVLKD-RLYVYHPDSWERRSAQTV 760

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           LY   E++  L   +  F+   A ++++ +   D
Sbjct: 761 LY---ELLVALTTSVAPFLSFTAEEVWEHVLKID 791



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K RE   +     Y N   HIGHA   I+ DV+ +++ L G D+L+  G D HG  I + 
Sbjct: 43  KGREIFLLHDGPPYANGHIHIGHALNKILKDVINKYNLLRGRDILYIPGWDCHGLPIERQ 102

Query: 62  AQNAGVTTKVFVDQNSR-NFRDM-----ADVLDISYDDFIR 96
            +    + K+  D+  +  FR +     +  ++I  ++FIR
Sbjct: 103 VEKELKSKKIRKDELPKAEFRKLCRDYASRFVEIQKEEFIR 143


>gi|99034770|ref|ZP_01314694.1| hypothetical protein Wendoof_01000481 [Wolbachia endosymbiont of
          Drosophila willistoni TSC#14030-0811.24]
          Length = 808

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
          YP+ + H+GH     I DV+AR+ R +G +VL   G D  G     AA++  ++ + +  
Sbjct: 7  YPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAARDNNISPETWTK 66

Query: 75 QNSRNFRDMADVLDISYD 92
          +N  N R     + +SY+
Sbjct: 67 ENIDNMRTQLKSIGLSYN 84



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 25/149 (16%)

Query: 288 KKVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           K++ + G  +  G  EK+SKS  N +DP  +IE+ G D  R F++ +    KD  +  DG
Sbjct: 565 KELIARGAKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDG 624

Query: 346 LKKRVNADLANGIGNLVSRSVSMILK------DYDGMIPTPGAFTESDESILSVCSRVLQ 399
           ++         G    V++   M+++       YD    T G   E  + I     ++L 
Sbjct: 625 VE---------GCSRYVNKLWRMVMQLRPVNIHYDNENVT-GGLLEYRKKI----HKLLH 670

Query: 400 EIRENMQNQLIHRALA---QVISLVSEVD 425
            + ++++N  ++  +A   ++ +L++E+D
Sbjct: 671 GLTDDLENCRLNCVVAKFREMTNLIAEID 699


>gi|172057960|ref|YP_001814420.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|254782405|sp|B1YIS7|SYI_EXIS2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171990481|gb|ACB61403.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 911

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L T   L+ P         ADL++ G D  R  F++    +   +
Sbjct: 521 IMDVWFDSGSSHAGVLATRPELERP---------ADLYLEGSDQYRGWFNSSLSTSVATT 571

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  K V SHGF+L  +G K+SKS+GN I PI+++++ G + LR ++ 
Sbjct: 572 GKAPY-KAVVSHGFVLDGQGRKMSKSIGNTIAPIQIMQQFGAEILRLWVA 620



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH    ++ D++ R+  ++G    +  G D HG  I  A Q AGV  K    
Sbjct: 58  YANGDIHMGHGLNKVLKDIVVRYKSMNGFRSPYVPGWDTHGLPIETALQKAGVDRKSMSV 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD     F+ +  + D  YD+   T +         L+  +++KG 
Sbjct: 118 AEFRELCAKYALEQVDHQREQFKRLGVLGD--YDNPYITLQPEFEAAQIRLFGDMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGKKPVYWSPSSESALAEAEI 198


>gi|315127065|ref|YP_004069068.1| leucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015579|gb|ADT68917.1| leucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 862

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 2/145 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R+    L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRNQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG 144
           YK   +  +   D+    +++V  G
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG 174


>gi|308389992|gb|ADO32312.1| putative leucyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 878

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|167922294|ref|ZP_02509385.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 326

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            AG   +    + S         L + +D
Sbjct: 102 EAGCAPERLARECSEAMAAQFVRLGLGHD 130


>gi|159904700|ref|YP_001548362.1| valyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886193|gb|ABX01130.1| valyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 886

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 17/136 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG       
Sbjct: 32  KRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVKV 91

Query: 63  QNAGVTTKV-------------FVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTC 106
           +     TK                D+N    R     L IS D   ++I T    +    
Sbjct: 92  EELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVKSLGISIDWDREYI-TMNPDYVRKS 150

Query: 107 RILWKKISDKGDIYKG 122
           +  + K+ +KG IY+G
Sbjct: 151 QTAFLKMYEKGLIYRG 166



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y    +  ++   
Sbjct: 452 VLDTWMDSSITPLVIAGWLEDDEFFK-KHYPVQLRPQGHDIIRTWAFYTIVRSLAITGEK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  + V +       G K+SKS GNV++P E+ +  G DALR +
Sbjct: 511 PWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW 554


>gi|187930051|ref|YP_001900538.1| leucyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691821|sp|B2UCA1|SYL_RALPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187726941|gb|ACD28106.1| leucyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 877

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     AA
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            N GV    +   N     +  + M   +D S +  + T    ++   + L+ K+ +KG 
Sbjct: 97  LNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSRE--VATCSPDYYRWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  E   Y+  ++ Y  +LLS
Sbjct: 155 AYRKTGTVNWDPVDQTVLANEQVI---DGRGWRSGAV-VEKREIPMYYLGITKYAQELLS 210


>gi|19746464|ref|NP_607600.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632618|sp|Q8P068|SYI_STRP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19748668|gb|AAL98099.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|255263851|ref|ZP_05343193.1| isoleucyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106186|gb|EET48860.1| isoleucyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 968

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DGS+     ADL++ G D  R  FH+    +   +   
Sbjct: 576 ILDVWFDSGSTHAFV--LRDREDGSEDGI--ADLYLEGTDQHRGWFHSSMLQSCGTNGRA 631

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P +V+E+ G D LR ++ +
Sbjct: 632 PY-RAVLTHGFTLDEKGMKMSKSIGNTIAPEKVVEQYGADILRLWVAQ 678



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-----AKAAQNAGVTT 69
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I      K  Q      
Sbjct: 62  YANGNLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPIEWKIEEKYRQKGRDKD 121

Query: 70  KVFVDQNSRNFRDM-ADVLDISYDDFIR 96
            V V++  +  RD  A  +DI  ++F R
Sbjct: 122 AVPVNEFRQECRDFAAGWVDIQRNEFKR 149


>gi|199599096|ref|ZP_03212501.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229551697|ref|ZP_04440422.1| leucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539090|ref|YP_003173589.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|199589989|gb|EDY98090.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229314946|gb|EEN80919.1| leucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257150766|emb|CAR89738.1| Leucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 803

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   + F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPRTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 34/190 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL      +P K     +F+ G IL  
Sbjct: 513 DYDKLKQWMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGA-IPNKEPFQRLFNQGMILGD 571

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNA 352
             EK+SKS GNV++P +V++E G D LR +      L   IA   DG         RV +
Sbjct: 572 NHEKMSKSKGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTDGLAGARKFLDRVWS 631

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              +  G L  R  ++                 +D  +  V +  ++++ E+ +    + 
Sbjct: 632 AFIDDEGKLRDRITTI-----------------NDGRLDKVYNETVKKVTEDYEALHFNT 674

Query: 413 ALAQVISLVS 422
           A+AQ++  ++
Sbjct: 675 AIAQMMVFIN 684


>gi|94990768|ref|YP_598868.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544276|gb|ABF34324.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|320105765|ref|YP_004181355.1| valyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924286|gb|ADV81361.1| valyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 932

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 26/126 (20%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLP-------------KKVFSHGF 295
           F+P DL V G DIL F    W A ++        ++P+P             ++V+ H  
Sbjct: 500 FYPTDLLVTGFDILFF----WVARMIMLGTHFMLDVPMPDGLARTLKDAVPFREVYIHAL 555

Query: 296 ILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +     +K+SK+ GNVIDPI++I+  G DA+R+ L  + + G D  + +   +   N   
Sbjct: 556 VRDADRQKMSKTKGNVIDPIDIIQRYGTDAVRFTLASQASPGTDVAFSE--ARTEGNRAF 613

Query: 355 ANGIGN 360
           AN I N
Sbjct: 614 ANKIWN 619


>gi|301300414|ref|ZP_07206616.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852016|gb|EFK79698.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 931

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D         +PADL++ G D  R  F++    +   S + 
Sbjct: 526 IMDVWFDSGSSHQGVCAERD------YLTYPADLYLEGSDQYRGWFNSSLITSVAYSGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KG K+SKSLGN I P EVI+++G + +R +++
Sbjct: 580 PY-KQILSQGFTLDGKGRKMSKSLGNTIVPSEVIDKMGAEIIRLWVL 625



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R   +      +  G D HG  I +  + AGV  K    
Sbjct: 58  YANGNIHMGHAMNKISKDFIVRSKSMMEFRTPYVPGWDTHGLPIEQQLKKAGVDRKAL-- 115

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            +   FR+M      + +D    DF R            T K  ++  +I ++ K+++KG
Sbjct: 116 -SVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + EV
Sbjct: 175 LIYKGKKPVFWSWSSESALAEAEV 198


>gi|260438526|ref|ZP_05792342.1| leucine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809115|gb|EFF68320.1| leucine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 800

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK 299
           D  K  +W P D +  G + +  H IY   W  FL    L     P  K+  + G IL  
Sbjct: 517 DREKINYWMPVDWYNGGMEHVTRHMIYSRFWHQFLYDLGLVNTSEPYAKRS-AQGLILGP 575

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GNVIDP++++ E G D LR +++         F    G     N     G 
Sbjct: 576 DGDKMSKSKGNVIDPLDIVNEYGADTLRTYVL---------FMGDYGDATPWNDSSVKGC 626

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R  +  L D     P P     S    +   S  ++E++ N        A+A ++
Sbjct: 627 KRFIERVAA--LTDLVSDEPVPAKLESSIHKTIKKVSADIEEMKFNT-------AIAALM 677

Query: 419 SLVSEV 424
           +L++E+
Sbjct: 678 TLINEI 683



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 19/184 (10%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ A  H+GH       +V++R  R+ G +VLF  G D +G      
Sbjct: 29  EKPKFYGLVEFPYPSGAGMHVGHIKAYSSIEVVSRKRRMQGYNVLFPIGFDAYGLPTENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       ++  D+N   F +    +  S+  D  I TTE+  +   + ++ K+ + G +
Sbjct: 89  AIKTKTHPRIITDKNIARFSEQLKRVGFSFDWDRVIDTTEEGFYKWTQWIFLKMFENGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y          RD+A  N     K       + G   +  H+ V    +  ++ R++ Y 
Sbjct: 149 Y----------RDKALVNYCPSCKVVLSNEDSQGGKCDICHSEVVQKSKVVWYLRITKYA 198

Query: 174 DKLL 177
           DKLL
Sbjct: 199 DKLL 202


>gi|45358147|ref|NP_987704.1| valyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74555235|sp|Q6LZP0|SYV_METMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|44920904|emb|CAF30140.1| Valyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 886

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 17/137 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDT 105
            +     TK                D+N    R     L IS D   ++I T    +   
Sbjct: 91  VEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVRSLGISIDWDREYI-TMNPDYVRK 149

Query: 106 CRILWKKISDKGDIYKG 122
            +  + K+ +KG IY+G
Sbjct: 150 SQTAFLKMYEKGLIYRG 166



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 22/281 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y    +  ++   
Sbjct: 452 VLDTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYTMVRSLAITGEK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG----- 339
           P  + V +       G K+SKS GNV++P E+ +  G DALR +       GKD      
Sbjct: 511 PWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLWASNS-TIGKDVPFAWK 569

Query: 340 --FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              Y    L+K  NA       N+   ++S +       I  P      D  ILS  + +
Sbjct: 570 EVEYGGRFLRKIWNA-CKFAKMNISDETISELKSLNSISIENP-----VDLWILSKLNNL 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAS----TVLYVTV 452
           + ++ +++ N  I+  +     L  E  D Y +  K     K   + A        Y   
Sbjct: 624 ISKVSDDLGNYKINTVVEIQKFLWHEFCDNYIEMVKHRLYNKEESESAQQEKLMAQYTLY 683

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +VI +   LL  F P  A  + +I  + D +  +   D+RL
Sbjct: 684 KVITESVKLLTPFTPHFAEIVGEIYEIDDLHTSWPVSDERL 724


>gi|86139175|ref|ZP_01057745.1| isoleucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824019|gb|EAQ44224.1| isoleucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 971

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 50/212 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSGL---------K 205
           V+W  ++G        +++L S  E+ P+++L  +R   V    FVK GL         +
Sbjct: 482 VKWTPQKG--------RNRLYSMIEARPDWVLSRQRAWGVPLTCFVKKGLLPTDEGFILR 533

Query: 206 DLSLSRK---TFD------W------------GIKIPDDPQY--IMYVWIDALTNYLTTT 242
           D +++ +    F+      W            G K+ D  Q   ++ VW D+ + +    
Sbjct: 534 DEAVNARIVAAFEAEGADAWYADGAKERFLGDGYKVDDWEQVFDVLDVWFDSGSTHAFV- 592

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-K 299
              D  DGS      AD+++ G D  R  FH+    A       P  K V +HGF L  K
Sbjct: 593 -LRDREDGSPDGI--ADVYMEGTDQHRGWFHSSLLQACGTKGRAPY-KNVVTHGFTLDGK 648

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           G K+SKSLGN I P E++++ G D LR ++ +
Sbjct: 649 GNKMSKSLGNTIVPEEIVKQYGADILRLWVAQ 680



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R    +     Y N   HIGHA    I D++ R H++ G D  +  G D HG        
Sbjct: 54  RTPFVLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDSRYVPGWDCHGLPIEWKIE 113

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++  K  +N      V   Q  R F D    +DI  ++F R
Sbjct: 114 EQYRKKGKNKDAVDVVEFRQECRAFADK--WVDIQREEFKR 152


>gi|120553794|ref|YP_958145.1| isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166229746|sp|A1TYY9|SYI_MARAV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120323643|gb|ABM17958.1| Isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 939

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  ++   P  K+V +HGF +  KG K+SKSLGNVI P
Sbjct: 558 PADMYLEGSDQHRGWFQSSLKTSIAMNGVAPY-KQVLTHGFTVDAKGYKMSKSLGNVIAP 616

Query: 314 IEVIEEVGVDALRYFL 329
            EV+ E+G D LR ++
Sbjct: 617 QEVMNELGADILRLWV 632



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           REK  +     Y N   HIGHA   I+ D++ +     G D  +  G D HG     K+ 
Sbjct: 48  REKFILHDGPPYANGSIHIGHAVNKILKDMIVKSRSFMGYDAPYVPGWDCHGLPIEHKVE 107

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
           +    AGV  KV      +  RD A   ++    DFIR
Sbjct: 108 QEIGKAGV--KVDYKTFRQACRDYATKQIEGQKTDFIR 143


>gi|94988868|ref|YP_596969.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992758|ref|YP_600857.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542376|gb|ABF32425.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546266|gb|ABF36313.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|15677729|ref|NP_274892.1| leucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|14285777|sp|Q9JXT2|SYL_NEIMB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|7227154|gb|AAF42228.1| leucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316985512|gb|EFV64459.1| leucyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325139552|gb|EGC62092.1| leucyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200950|gb|ADY96405.1| leucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|315653191|ref|ZP_07906116.1| leucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489556|gb|EFU79193.1| leucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 768

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 482 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 541

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 542 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 592

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 593 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 652

Query: 426 R 426
           +
Sbjct: 653 K 653



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 11/163 (6%)

Query: 15  YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A   G       
Sbjct: 4   FPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYAIKTGRDPMDVT 63

Query: 74  DQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +N  NF++    L  SY  D  + T++  ++   + +++++   G  Y+      +S  
Sbjct: 64  KENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLAYEAEVPVNWSPD 123

Query: 132 DEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
                 ++EV  G    G +   + N  QWM       +++AY
Sbjct: 124 LGTVVANEEVIDGKTERGGFPVYRRNMRQWM------LKMTAY 160


>gi|309808144|ref|ZP_07702056.1| leucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168613|gb|EFO70719.1| leucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 768

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P +++V G +    H +Y   W   L    +   K    K+++ G IL   EK+SKS
Sbjct: 482 KWLPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGLILKDHEKMSKS 541

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++EE G D+LR + +          +D +G            I   + R  
Sbjct: 542 RGNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVW 592

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ D D   + +     E+D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 593 RLMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEAQ 652

Query: 426 R 426
           +
Sbjct: 653 K 653



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 11/163 (6%)

Query: 15  YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + A   G       
Sbjct: 4   FPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQYAIKTGRDPMDVT 63

Query: 74  DQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +N  NF++    L  SY  D  + T++  ++   + +++++   G  Y+      +S  
Sbjct: 64  KENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLAYEAEVPVNWSPD 123

Query: 132 DEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
                 ++EV  G    G +   + N  QWM       +++AY
Sbjct: 124 LGTVVANEEVIDGKTERGGFPVYRRNMRQWM------LKMTAY 160


>gi|300214721|gb|ADJ79137.1| Isoleucyl-tRNA synthetase(Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 931

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D         +PADL++ G D  R  F++    +   S + 
Sbjct: 526 IMDVWFDSGSSHQGVCAERD------YLTYPADLYLEGSDQYRGWFNSSLITSVAYSGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KG K+SKSLGN I P EVI+++G + +R +++
Sbjct: 580 PY-KQILSQGFTLDGKGRKMSKSLGNTIVPSEVIDKMGAEIIRLWVL 625



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R   + G    +  G D HG  I +  + AGV  K    
Sbjct: 58  YANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVDRKAL-- 115

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            +   FR+M      + +D    DF R            T K  ++  +I ++ K+++KG
Sbjct: 116 -SVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + EV
Sbjct: 175 LIYKGKKPVFWSWSSESALAEAEV 198


>gi|145590523|ref|YP_001152525.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166231633|sp|A4WHK6|SYL_PYRAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145282291|gb|ABP49873.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 945

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+ A  YPN   HIGH    +IADVLARFHR  G  VLF       G  I   A+  
Sbjct: 35  KFFITAAYPYPNGAIHIGHGRTYLIADVLARFHRHLGRAVLFPMAFHYTGTPILTIAEAI 94

Query: 66  GVTTKVFVDQ-------NSRNFRDMADVL 87
               +  V++            R M D L
Sbjct: 95  AAGDETVVEEYMAIYGVPEEEMRKMGDPL 123



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 32/230 (13%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           +FW P D    GKD++  H  ++  F   A  P    P+++ ++G++L +GEK+SKS  N
Sbjct: 587 EFWYPLDSRNSGKDLIPNHLTFF-IFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRN 645

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           V+   + +E  G D LR  L       +D  F   + ++   NA     I  L  R ++ 
Sbjct: 646 VLPLDKAVEMYGPDPLRATLAISAEVEQDLDFRHAEAVR---NAQQLMSIYTLAQR-LAQ 701

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRY 427
             +D +         T  D  +LS  +  L+ +R+  +   + +A  +++  +  + D Y
Sbjct: 702 SAEDREP--------TWLDRWLLSEVALALERVRDAYEKVRVRQAAVELLYNIKNIFDSY 753

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +        P R      + VEV +  A+ L+   P LA +++ +L
Sbjct: 754 MTAVE-------RPSR------LAVEVAKAWAVALEPIAPHLAEEVWSLL 790


>gi|325968455|ref|YP_004244647.1| aminoacyl-tRNA synthetase class Ia [Vulcanisaeta moutnovskia
           768-28]
 gi|323707658|gb|ADY01145.1| aminoacyl-tRNA synthetase class Ia [Vulcanisaeta moutnovskia
           768-28]
          Length = 892

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 50/258 (19%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P++ +  + YF +   ++D+L+   ++    I P E    +I ++KS   D  +SR+ +
Sbjct: 431 TPIEIIVTKEYFLKQLPFKDELIKLVKNE-MVIKPPEYAQTLIDWIKSLEFDWPISRRRY 489

Query: 215 DWGIKIP--------------------------DDP----------------QYIMYVWI 232
            +G +IP                          D+P                  ++  W 
Sbjct: 490 -YGTEIPIWYCIDEEGNAKPIVPKPGKYYRPWRDEPPPEVKEQCPSGKLVGEDRVLDTWF 548

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYW--PAFLLSANLPLPKK 289
           D+  +++  TGY      +  K +P + L   G DI+R    Y    A+LL    P    
Sbjct: 549 DSSISWIYATGYTKPEIRAFEKVYPHSILRPQGYDIIRTWLYYSVVRAYLLYGKPPFKYV 608

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             S   +  +GE + KS GN+IDPI  +E+ G DA R++       G D  Y +  +  R
Sbjct: 609 RISGMGLDERGEAMHKSKGNIIDPIPPVEKYGADATRFWAAASAKLGSDYRYSEQLI--R 666

Query: 350 VNADLANGIGNLVSRSVS 367
              D A  + N ++R VS
Sbjct: 667 TGHDFAIKLWN-IARFVS 683



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +++  L I T   YP+ +PHIG        D++ARF R+ G +V+F    D +G  +
Sbjct: 118 EKKPTLVIDTPPPYPSGRPHIGGIAHYAQIDMIARFFRMRGYNVIFPFYADRNGLPV 174


>gi|306827040|ref|ZP_07460338.1| isoleucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430786|gb|EFM33797.1| isoleucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRNDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|284044283|ref|YP_003394623.1| leucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948504|gb|ADB51248.1| leucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 819

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 16/197 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+   + YP+ +PH+GH     + D +A F+R  G  VL   G D  G      A 
Sbjct: 37  RPPYYVLEMLPYPSGEPHMGHMKNYALGDAVAHFNRRIGRRVLHPMGYDAFGLPAENNAI 96

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV     T   +    R FR+    + I +     T E R++   + L+ ++ ++G  
Sbjct: 97  RTGVHPRDATAESIASFQRQFREWG--ISIDWTREFGTHEPRYYRWTQWLFLQLYERGLA 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+   +  +   D+    +++V  G      +       VQW      FF ++ Y D+LL
Sbjct: 155 YRKEAAVNWCPNDQTVLANEQVVDGHCERCGFEVEVRQLVQW------FFAITRYADRLL 208

Query: 178 SYYES--HPEFILPIER 192
           +  ++   PE +  ++R
Sbjct: 209 ADLDTIQWPEHVKTMQR 225



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 92/205 (44%), Gaps = 20/205 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           ++ P D ++ G +    H +Y   F        LL ++ P  + +F+ G I   G K+SK
Sbjct: 528 RWMPVDQYIGGVEHAILHLLYARFFTKAFADMGLLGSDEPF-QALFTQGMITRDGAKMSK 586

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNVI P   ++  G D  R +++      +D  +  +G++         G+   ++R 
Sbjct: 587 SKGNVISPSTYVDRYGADTARCYILFIGPPDQDADWSDEGVE---------GVHRFLARL 637

Query: 366 VSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
             +  +   G   +P A +  +D ++       ++++  ++  +   + A++ V+ LV+E
Sbjct: 638 WRLGDELGAGSCDSPAAGSLSADVAVARKAHWAIEKVTNDVSGRFAFNTAISAVMELVNE 697

Query: 424 VDRYFDAQKPWELKKTNPDRASTVL 448
             R+ ++  P  L+      AS V 
Sbjct: 698 CYRHRESASPEVLRFACATAASLVF 722


>gi|257784636|ref|YP_003179853.1| leucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473143|gb|ACV51262.1| leucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 857

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           R K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 45  RPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFDVLHPMGFDAFGLPAENAAI 104

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                  V T   +DQ  +    M    D   D    T +  ++   + ++ K+ +KG +
Sbjct: 105 KHNTQPSVWTHKNIDQAVKTMFRMGFAYD--KDRMFNTCDPEYYKWGQWIFLKMLEKGLV 162

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +   D+    +++V    +G+ +     P +  E   ++ R++ Y  +LL
Sbjct: 163 YRATSPVNWCPNDKTVLANEQV---VNGKCWRCGAVPEK-RELSQWYLRITDYAQELL 216


>gi|205374574|ref|ZP_03227369.1| leucyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 146

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE+ K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDK 116
            A + G     F   N  NFR     L  SY  D  + TT+  ++   + ++ K+ +K
Sbjct: 88  YALDTGNDPAEFTKLNVDNFRRQIKALGFSYDWDREVNTTDPSYYKWTQWIFTKLYEK 145


>gi|193216846|ref|YP_002000088.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002169|gb|ACF07384.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 889

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 49/277 (17%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +  ++       P   +A   P DL+  G D  R  F++    + +   
Sbjct: 519 QDIMDVWFDSGSTSISV-----KPGNVEA---PFDLYFEGSDQYRGWFNSSLINSVIWRN 570

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K + SHGF+L  KG K+SKS GNVIDP+++  + G D LR ++            
Sbjct: 571 KAPF-KALLSHGFLLDGKGNKMSKSKGNVIDPLDITNKYGADILRLWV------------ 617

Query: 342 DKDGLKKRVNADLANGIG---NLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSR 396
                    N++  N I     ++ +++ +  K  + M    G+ ++ D  E  LS    
Sbjct: 618 --------ANSEYTNDISIDDKILQQNIEIYRKFRNTMKFILGSISDYDWSEVKLSSIHE 669

Query: 397 VLQEIRENMQNQLI-----HRALAQVISLVS----EVDRYFDA--QKPWELKKTNPDRAS 445
           ++    +N+ N++I     +R +A VI L++     +  Y+ +  +    L K N     
Sbjct: 670 LMFNRLQNLTNKIIEAYEDYRFVA-VIKLINNFVINLSSYYLSIVKDILYLNKQNDSERR 728

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            V +V   + + L I     +P    +I+  L + ++
Sbjct: 729 QVQFVLASIAKVLTIAFAPIMPSTCEEIYSYLNIPNK 765



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTK 70
           Y N   H+GHA   II D++ RF  + G    +  G D HG     K+   A+ A     
Sbjct: 62  YANGNIHLGHALNKIIKDIIVRFRTMQGFFSPYVAGWDTHGLPIEHKMLSEAKKAAKDYS 121

Query: 71  VF-------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +              ++     F+ +A + D  + D   T +K        L+KK    G
Sbjct: 122 IVELRKAAHQYALSQIELQKEQFKKLAVLTD--FQDIYVTLDKELEAKQLELFKKEILSG 179

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYK     ++S   ++   + EV
Sbjct: 180 LIYKDLKPVYWSPSSQSALAEAEV 203


>gi|169351198|ref|ZP_02868136.1| hypothetical protein CLOSPI_01977 [Clostridium spiroforme DSM 1552]
 gi|169292260|gb|EDS74393.1| hypothetical protein CLOSPI_01977 [Clostridium spiroforme DSM 1552]
          Length = 929

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++   TG +      +   +P DL+  G D  R  F++            
Sbjct: 543 IMDVWFDSGSSH---TGCMK----ERGYPYPVDLYFEGSDQYRGWFNSSLIIGTAAHGKA 595

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K V SHGF+L  KG K+SKSLGN +DPI+++ + G D +R
Sbjct: 596 PY-KTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVNQYGADIVR 637



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GH    +I DV+ R++ ++G    F  G D HG  I  A Q  GV  K   +
Sbjct: 78  YANGNMHMGHMLNKVIKDVICRYNNMEGRYTPFIPGWDTHGLPIENAIQKLGVNRK---E 134

Query: 75  QNSRNFRDMADV 86
            ++  FR+  D 
Sbjct: 135 MSTAAFREKCDA 146


>gi|167897728|ref|ZP_02485130.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 332

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 45  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 104

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 105 EAGCAPERLARECS 118


>gi|251797858|ref|YP_003012589.1| isoleucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545484|gb|ACT02503.1| isoleucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 1029

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGN 309
           A+ +PAD+   G D  R  F ++   + L +   P  K V S G IL   G+K+SKS GN
Sbjct: 538 AEQYPADMICEGIDQTRGWFFSLLAVSTLYNGKAPY-KAVISTGHILDENGQKMSKSKGN 596

Query: 310 VIDPIEVIEEVGVDALRYFLVREIA 334
           VIDP E+I E G DA R+ L+ + A
Sbjct: 597 VIDPWEIINEYGTDAFRWALLADSA 621


>gi|18312411|ref|NP_559078.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|60390730|sp|Q8ZXT6|SYL_PYRAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|18159866|gb|AAL63260.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 945

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 32/58 (55%)

Query: 6  KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          K +++ A  YPN   HIGH    +IADVLARFHR  G  VLF  G    G  I   A+
Sbjct: 35 KFFVTAAYPYPNGAIHIGHGRTYLIADVLARFHRHMGRVVLFPMGFHYTGTPILTIAE 92



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 30/228 (13%)

Query: 255 FW-PADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNV 310
           FW P D    GKD++  H  ++  F   A  P    P+++ ++G++L +GEK+SKS  NV
Sbjct: 588 FWYPLDSRNSGKDLIPNHLTFF-IFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNV 646

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +   + ++  G D LR  L       +D  F   + ++   NA     I +L  R ++  
Sbjct: 647 LPLDKAVDMYGPDPLRATLAITAEVEQDLDFRHAEAIR---NAQQLMSIYSLAQR-LAQT 702

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            +D      +P      D+ ++S  + VL+  RE  +   + +A  +V+         ++
Sbjct: 703 AEDR-----SPNWL---DKWLVSEIALVLERAREAYEKVRVRQAAVEVL---------YN 745

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A+  ++    + +R S    + VE  R  A+ ++   P LA +I+ IL
Sbjct: 746 AKSVFDQYLASVERPSK---LAVEAARAWAVAMEPIAPHLAEEIWSIL 790


>gi|326803168|ref|YP_004320986.1| leucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650987|gb|AEA01170.1| leucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 804

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 34/190 (17%)

Query: 253 AKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHKG-EK 302
           A +W   DL++ G +    H +Y   W  FL    + +P     +K+F+ G IL +G EK
Sbjct: 518 ANYWMNVDLYIGGAEHAVLHLLYARFWNMFLYDLGV-VPTEEPFQKLFNQGMILGEGHEK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLAN 356
           +SKS GNV++P +++E  G D LR +      L   IA  +DG        +RV     +
Sbjct: 577 MSKSKGNVVNPDDIVERYGADTLRLYEMFMGPLDASIAWSEDGLAGARRFLERVWRLFVD 636

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
               L  R  ++   + D                  V ++ ++++ E+++    + A++Q
Sbjct: 637 SEDQLRDRITTIDTGELD-----------------KVYNQTVKKVTEDLEKLHFNTAISQ 679

Query: 417 VISLVSEVDR 426
           ++  V+E ++
Sbjct: 680 MMVFVNEANK 689


>gi|325068542|ref|ZP_08127215.1| leucyl-tRNA synthetase [Actinomyces oris K20]
          Length = 993

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK ++     YP+ +  H+GH    I  DV+ARF R+ G +VL+T G D  G    + 
Sbjct: 53  DKEKFFLLDMFPYPSGKGLHVGHPLGYIATDVVARFTRMTGRNVLYTMGYDAFGLPAEQY 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
           A   G   ++  + N  N R     L +S+D          D++R T+
Sbjct: 113 AVTTGQHPRISTEANIANMRRQLRRLGLSHDPRRSLATIDVDYVRWTQ 160


>gi|315304010|ref|ZP_07874447.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
 gi|313627619|gb|EFR96315.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
          Length = 921

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S+    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLTTAVAVTGES 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V SHGF L  +G K+SKSLGN I P +VI+++G D +R ++ 
Sbjct: 576 PY-RNVLSHGFALDGEGRKMSKSLGNTILPGKVIKQLGADIVRLWVA 621



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  +  RT  KR
Sbjct: 115 MSVAEFRKLCAEYAMTQVEGQRTGFKR 141


>gi|258507843|ref|YP_003170594.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257147770|emb|CAR86743.1| Leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649171|dbj|BAI41333.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 803

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   + F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPRTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 34/194 (17%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKK-----VFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL      +P K     +F+ G IL  
Sbjct: 513 DYDKLKQWMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGA-IPNKEPFQRLFNQGMILGD 571

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNA 352
             EK+SKS GNV++P +V++E G D LR +      L   IA   DG         RV +
Sbjct: 572 NHEKMSKSKGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTDGLAGARKFLDRVWS 631

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              +  G L  R  ++                 +D  +  V +  ++++ E+ +    + 
Sbjct: 632 AFIDDEGKLRDRITTI-----------------NDGRLDKVYNETVKKVTEDYEALHFNT 674

Query: 413 ALAQVISLVSEVDR 426
           A+AQ++  ++   +
Sbjct: 675 AIAQMMVFINSARK 688


>gi|253702345|ref|YP_003023534.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
 gi|251777195|gb|ACT19776.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 925

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 17/141 (12%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E   F+  G    S  +  FD    I D       VW D+  ++       DN       
Sbjct: 506 EASRFLPEGTCCPSCGKSEFDKETDILD-------VWFDSGVSHAAVLELRDNLSS---- 554

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
             PAD+++ G D  R  FH+    +       P  K V +HGF++   G K+SKS+GNV+
Sbjct: 555 --PADMYLEGSDQHRGWFHSSLLASVGTRGRAPY-KNVLTHGFVMDGAGRKMSKSVGNVV 611

Query: 312 DPIEVIEEVGVDALRYFLVRE 332
            P +VI++ G D LR ++  +
Sbjct: 612 APEDVIKKFGGDVLRLWVAAQ 632



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K + +  +     Y N   HIGHA   I+ D++ +  R++G    +  G D HG  I
Sbjct: 45  KSKPRYVLHDGPPYANGHIHIGHALNKILKDIVLKSKRMEGFSAPYVPGWDCHGLPI 101


>gi|150400195|ref|YP_001323962.1| valyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012898|gb|ABR55350.1| valyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 886

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGKMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA 84
            +     TK   D N   FR + 
Sbjct: 91  VEEVNNITK--SDINRHEFRKLC 111



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 22/279 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +   G+L + +    K +P  L   G DI+R  A Y    +  L++  
Sbjct: 452 VLDTWMDSSITPMVVAGWLKD-EKFFEKHYPVQLRPQGHDIIRTWAFYTIIRSLALTSEK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD------ 338
           P  + V +       G K+SKS GNV++P E+ +  G DALR +       GKD      
Sbjct: 511 PWNEIVVNGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLWASNS-TIGKDVPFAWK 569

Query: 339 -GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              Y    L+K  NA       N+    +S +    +  I  P      D  ILS  + +
Sbjct: 570 EVEYGSRFLRKIWNA-CKFAKMNIPDEVISNLKSIENFEIENP-----IDLWILSKLNDL 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAS----TVLYVTV 452
           ++ +  +++N  I+  +     L  E  D Y +  K     K   + A        Y   
Sbjct: 624 IKRVSTDLENYRINTVVEIQKFLWHEFCDNYIEMVKHRLYSKETSESAKKDKLMAQYSLY 683

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +VI +   L+  F P  A  + +I  V D N  + ++++
Sbjct: 684 KVITETLKLIAPFTPHFAEIVGEIYEVDDLNTSWPTINE 722


>gi|121634194|ref|YP_974439.1| leucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166231622|sp|A1KS07|SYL_NEIMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120865900|emb|CAM09636.1| putative leucyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|94994746|ref|YP_602844.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548254|gb|ABF38300.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRNDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|50914610|ref|YP_060582.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822719|sp|Q5XB14|SYI_STRP6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50903684|gb|AAT87399.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 933

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMNL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRDDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|164687829|ref|ZP_02211857.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
 gi|164603104|gb|EDQ96569.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
          Length = 806

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 11/191 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA   G+
Sbjct: 36  YTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAAIKHGI 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-KGCY 124
               +  +N  + ++   +L +SYD    + T+   ++   + ++ K  + G  Y K  +
Sbjct: 96  HPAKWTYENIDDMKNQLKLLGLSYDWERELATSNPDYYKFTQEIFLKFLEAGLAYKKKSF 155

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS---YYE 181
             W    +    N+  V     GQ        V+  E E ++F+ + + ++LL+     E
Sbjct: 156 VNWCPSCETVLANEQVV----GGQCERCDAVVVK-KELEQWYFKTTEFAEELLNDLDKLE 210

Query: 182 SHPEFILPIER 192
             PE +  ++R
Sbjct: 211 GWPEKVKTMQR 221



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 104/235 (44%), Gaps = 34/235 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           K+ P D ++ G +    H +Y   F        ++  + P  K + + G +L  G K+SK
Sbjct: 511 KWMPVDQYIGGVEHAIMHLLYARFFVKALKKVGMVDFDEPF-KNLLTQGMVLMDGSKMSK 569

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN + P+E+I++ G D  R F++      +D  + + G++         G    ++R 
Sbjct: 570 SKGNTVSPLEIIDKYGADTARLFVLFAAPPERDLDWSEQGVE---------GCFRFLNRV 620

Query: 366 VSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVS 422
             ++  LKD           T+ D+++       L+++ +++  +   + A+A ++ L++
Sbjct: 621 YRLVDELKDIAKSDAKVNVATKEDKAMRFTIHSTLKKVTDDLSFKFGFNTAIASLMELIN 680

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E+ +Y       EL   N         +  E I  +  +L  F P +  +++ ++
Sbjct: 681 EMYKYK------ELDTRNDG-------IIKEGIETIVTILAPFTPHVGEELWQMI 722


>gi|90962017|ref|YP_535933.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123391348|sp|Q1WTA9|SYI_LACS1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|90821211|gb|ABD99850.1| Isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 931

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D         +PADL++ G D  R  F++    +   S + 
Sbjct: 526 IMDVWFDSGSSHQGVCAERD------YLTYPADLYLEGSDQYRGWFNSSLITSVAYSGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KG K+SKSLGN I P EVI+++G + +R +++
Sbjct: 580 PY-KQILSQGFTLDGKGRKMSKSLGNTIVPSEVIDKMGAEIIRLWVL 625



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R   + G    +  G D HG  I +  + AGV  K    
Sbjct: 58  YANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVDRKAL-- 115

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            +   FR+M      + +D    DF R            T K  ++  +I ++ K+++KG
Sbjct: 116 -SVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + EV
Sbjct: 175 LIYKGKKPVFWSWSSESALAEAEV 198


>gi|229496879|ref|ZP_04390587.1| isoleucine-tRNA ligase [Porphyromonas endodontalis ATCC 35406]
 gi|229316197|gb|EEN82122.1| isoleucine-tRNA ligase [Porphyromonas endodontalis ATCC 35406]
          Length = 1136

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 12/163 (7%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
            + +PAD    G D  R  F  ++  + ++  ++   K V ++G +L K G K+SK LGN
Sbjct: 637 GELFPADFIAEGIDQTRGWFFTLHAISTMVRGSVAF-KNVLANGLVLDKNGNKMSKRLGN 695

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            +DP   IE+ G D LR++++   +   +  +D +G+K+ V+      + N  +     +
Sbjct: 696 AVDPFATIEQYGSDPLRWYMITNASPWDNIKFDPEGIKE-VSRKFFGTLYN--TYQFFAL 752

Query: 370 LKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQN 407
             + DG I +    ++S     D  I S+   ++ E+ +++ N
Sbjct: 753 YANLDGFIASEQPLSDSERPEIDRWIRSLLHSLIAEVDQHLAN 795


>gi|325131536|gb|EGC54243.1| leucyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139210|gb|EGC61756.1| leucyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325141589|gb|EGC64055.1| leucyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197607|gb|ADY93063.1| leucyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|301062444|ref|ZP_07203096.1| valine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443444|gb|EFK07557.1| valine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 884

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 29/269 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----- 281
           ++  W  +     +T G+ D     K  F+P    + G DIL F    W A ++      
Sbjct: 451 VLDTWFSSALWPFSTLGWPDETPELKT-FYPTSALITGFDILFF----WVARMMMMGIHF 505

Query: 282 -ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD- 338
             ++P  + V+ H  +   +G+K+SKS GNVIDP+ V++E G DA R+ L    A G+D 
Sbjct: 506 MGDVPF-RDVYIHALVRDAEGKKMSKSKGNVIDPLVVMDEFGTDAFRFTLAALAAQGRDI 564

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVC 394
              ++  L  R      N I N  +R   M L D +     PG+ T S    D  IL+  
Sbjct: 565 KLSEERILGYR---HFVNKIWN-AARFAFMNLDDEE----LPGSETVSSTLADRWILTRI 616

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            +V   + + +++   + A       V     D Y +  K  +L   +  R         
Sbjct: 617 GQVSGIVAQALEDYQFNEAAGLCYQFVWHEFCDWYLEMAKQ-DLYGEDQARKHATRRTMR 675

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E +     LL  F+P +  +I+  L  AD
Sbjct: 676 EALAASLKLLHPFMPFVTEEIWQRLPGAD 704


>gi|294788125|ref|ZP_06753369.1| leucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294484418|gb|EFG32101.1| leucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 875

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV +RF +L G +VL   G D  G     AA 
Sbjct: 32  KPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKLQGYNVLQPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + GV    +  QN     +  + +   LD  ++  + T    ++   ++L+ ++  KG I
Sbjct: 92  DRGVAPAAWTYQNIDYMKQQLKSLGFALD--WERELATCRPEYYRWEQMLFTRLFKKGII 149

Query: 120 YK 121
           Y+
Sbjct: 150 YR 151



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 33/241 (13%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L  T Y +N DG K  F P ++ V   D  R          +SA L           ++ 
Sbjct: 583 LQATYYRENEDGKKQWFNPTEVTVQTDDKGR---------PVSATL----NADGQPVVIG 629

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLAN 356
             EK+SKS  N +DP E+I+  G D  R F++      +   +   G+    R  A L  
Sbjct: 630 GVEKMSKSKNNGVDPQEIIDAYGADTARLFMMFASPPEQSLEWSDAGVAGAHRFLARLWR 689

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +   V    + ++K   G +   G+  +    + S  ++V  +     Q    + A+A 
Sbjct: 690 TVYEFVQNGGANVVKFAGGEL--SGSLKDLRFKLHSTIAKVTDDYDRRQQ---FNTAIAA 744

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+     K  E+ +           V  EVI  + ILL   VP +   ++  
Sbjct: 745 VMELLNQYDK---TDKSGEIGQA----------VAREVIESVVILLSPIVPHITETLWSE 791

Query: 477 L 477
           L
Sbjct: 792 L 792


>gi|296141878|ref|YP_003649121.1| leucyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296030012|gb|ADG80782.1| leucyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 952

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV  R+HR++G +VL T G D  G    + A 
Sbjct: 58  DKLFLLDMFPYPSGAGLHVGHPLGFIATDVFGRYHRMNGANVLHTMGFDAFGLPAEQYAV 117

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G   +V  ++N   + +    L +++D+  R +           W        I+   
Sbjct: 118 QTGTHPRVTTEKNVARYLEQIATLGLAHDERRRVSTTDPEFYHWTQW--------IFLQI 169

Query: 124 YSGWY-SLRDEA 134
           Y+ WY S +D A
Sbjct: 170 YNAWYDSAQDRA 181


>gi|170092373|ref|XP_001877408.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647267|gb|EDR11511.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1078

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILHKGEKISKSLGNVID 312
           PAD    G D  R    ++   +LS +L    P    + +   +   G+K+SKSL N  D
Sbjct: 559 PADFVSEGIDQTR--GWFYTLLVLSTHLFGKAPWKNLIVTGLVLAADGKKMSKSLRNYPD 616

Query: 313 PIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNL--------VS 363
           P  +I++ G DA R FLV   I  G +  + +DG+++ +   L   + +         + 
Sbjct: 617 PNIIIDKYGADATRMFLVNSPIVRGDNLRFREDGVREVIARVLLPWLNSFRFFLGHVALF 676

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           + V+ I   Y+   P P      D  IL+ C  +++ +RE M    ++  + +++ L+ E
Sbjct: 677 KKVNGIDFTYNAHAPLPNNVM--DRWILARCQSLIKLVREEMAAYRLYTIIPRLLDLIDE 734

Query: 424 VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  ++       LK +   +  +  L    E +  L   L ++ P +   ++  L
Sbjct: 735 LTNWYIRFNRKRLKGEDGKEDTNLALNTLFEALLTLCRTLSSYTPFITENLYQSL 789


>gi|71027585|ref|XP_763436.1| leucyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350389|gb|EAN31153.1| leucyl-tRNA synthetase, putative [Theileria parva]
          Length = 918

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K YI + I Y + +  H+GH     + DV+AR+ RL G +VL   G D  G      ++
Sbjct: 148 KKYYILSMIPYVSGKGLHVGHLLGYTVVDVIARYKRLQGFNVLNPMGYDSFGIPTQLYSK 207

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +T +  V+QN  NFR     +  S+D
Sbjct: 208 KQNLTPEEAVEQNVNNFRQQLKAMGYSFD 236



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 36/183 (19%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLA 355
           K+SKS GN+  P E+I   G DALR  L+ +    KD  +    ++      K +N  + 
Sbjct: 724 KMSKSRGNIASPEEIIHRFGADALRLHLLFQGPVDKDRIWSIQSIQGPYKLLKSINTFVT 783

Query: 356 NGIGNLVSR----SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           N    L ++    +  +     D  I  P        S+ S  +  +  +  NM+N  ++
Sbjct: 784 NFFKQLFTQSSVNTNVVNNNTSDSNIVHP--------SVKSKLNEFINVMTYNMENFKLN 835

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           +        VSE   +    K W+ +K           +T+ V+    I L  F P LA 
Sbjct: 836 K--------VSEFFTFLRLMKLWDEEKK----------LTLRVVEIFLITLSPFAPHLAE 877

Query: 472 KIF 474
            ++
Sbjct: 878 HLW 880


>gi|320175116|gb|EFW50228.1| Leucyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 860

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  K  +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKSLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082319|sp|A7GRM0|SYI_BACCN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 921

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   +  +Y  + + I+  E  N V +  +    ++   R+  D    G   P  P
Sbjct: 453 RQRAWGVPIPVFYAENNDPIITDETINHVANLFREHGSNVWFEREAKDLLPEGFTHPSSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++      L+  D  +    PADL++ G D  R  F++   
Sbjct: 513 NGEFRKETDIMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLS 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A  ++   P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 567 TAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-------------------KISD 115
                FR +    + +Y+   R  E+      R  W                    +++ 
Sbjct: 115 MPVAEFRKLC--AEYAYEQVNRQREQFKRLGVRADWDHPYITLEPAYEAQQIKVFGEMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|256827875|ref|YP_003156603.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577051|gb|ACU88187.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 829

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 14/186 (7%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D ++  +W P D ++ G +    H +Y   F+        L+ + P  K + + G +L  
Sbjct: 521 DPAEVAYWMPVDQYIGGIEHAILHLLYSRFFVKALRDEGYLTHDEPF-KNLLTQGMVLLH 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP E+I + G D +R F +      KD  ++  G++    +   N + 
Sbjct: 580 GSKMSKSKGNVVDPDEMIAKYGADTVRLFCLFAAPPEKDLEWNDKGIEG--ASRFLNRLW 637

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            LV   +  +L      +   G   ES+  +       ++ +  +++N+   + A+A ++
Sbjct: 638 RLVD-ELDDVLSPVGTCVSVEGTLGESEAELRRKEHDTVRRVERDIENKFQFNTAIAAMM 696

Query: 419 SLVSEV 424
            LV+ +
Sbjct: 697 ELVNSL 702



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 10/197 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ EK Y+     YP+ + H+GH     I DV+AR+ R+ G +V    G D  G     A
Sbjct: 29  RDGEKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARYKRMQGFNVFHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L  SY  D  I T    ++   +  + K  +KG +
Sbjct: 89  AIKNNTHPAKWTYENIAYMRAQLKRLGYSYDWDREIATCHPGYYRFEQEFFLKFLEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS- 178
           Y+      +         +++V +G   +      + VQ  +   +F R++ Y ++LL+ 
Sbjct: 149 YRKNAPVNWCPSCHTVLANEQVEEGLCWRC----DSEVQQKQLSQWFLRITDYAEELLAD 204

Query: 179 ---YYESHPEFILPIER 192
                +  PE +L ++R
Sbjct: 205 LDKLTDGWPERVLTMQR 221


>gi|258591433|emb|CBE67734.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [NC10 bacterium 'Dutch
           sediment']
          Length = 938

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 12/122 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +  +  + +F+P    V   DI+     +W A ++  
Sbjct: 497 DPD-VLDTWFSSALWPFSTMGWPEQTELLR-RFYPTSTLVTSFDII----FFWVARMMMM 550

Query: 283 NLP----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L     +P ++V+ H  +   +G+K+SKS GNVIDP+E+I+  G DA R+ L    A G
Sbjct: 551 GLKFMGDVPFREVYIHALVRDAEGQKMSKSKGNVIDPLEIIDRYGADAFRFTLAALAAQG 610

Query: 337 KD 338
           +D
Sbjct: 611 RD 612


>gi|227891035|ref|ZP_04008840.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867124|gb|EEJ74545.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 948

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D         +PADL++ G D  R  F++    +   S + 
Sbjct: 543 IMDVWFDSGSSHQGVCAERDYLT------YPADLYLEGSDQYRGWFNSSLITSVAYSGHA 596

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KG K+SKSLGN I P EVI+++G + +R +++
Sbjct: 597 PY-KQILSQGFTLDGKGRKMSKSLGNTIVPSEVIDKMGAEIIRLWVL 642



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D + R   + G    +  G D HG  I +  + AGV  K    
Sbjct: 75  YANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVDRKAL-- 132

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            +   FR+M      + +D    DF R            T K  ++  +I ++ K+++KG
Sbjct: 133 -SVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKG 191

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + EV
Sbjct: 192 LIYKGKKPVFWSWSSESALAEAEV 215


>gi|224372863|ref|YP_002607235.1| valyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588843|gb|ACM92579.1| valyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 858

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 19/130 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--------FWPADLHVIGKDILRFHAIY 274
           DP  ++  W  +     +T G+ +   G   K        F+P +L + G DIL F    
Sbjct: 438 DPD-VLDTWFSSALWPFSTLGWENGEWGKGEKWNPEDLERFYPNNLLITGFDILFF---- 492

Query: 275 WPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           W A ++       K V      LH       G+K+SKS GNVIDP+E+IE+   DALR+ 
Sbjct: 493 WVARMMMMGTHFLKDVPFRDVYLHALVRDEHGQKMSKSKGNVIDPLEMIEKYSADALRFT 552

Query: 329 LVREIACGKD 338
           L      G+D
Sbjct: 553 LAILAVQGRD 562



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 22/148 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAKAAQNAGVTTKV 71
           HIGHA    + D++ R+ R+DG   L+  GTD  G         Q +A+      +  + 
Sbjct: 47  HIGHALTFTLQDIMVRYKRMDGYATLWQPGTDHAGIATQNVVEKQILAEGKTKEDLGREE 106

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+ +            ++  R +      S + F  T ++      R+ +KK+ ++G I 
Sbjct: 107 FLKRVWEWKEFSGGTITKQLRHLGASPAWSRERF--TMDEGLQRAVRVAFKKLYEEGLIV 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           KG Y   +  +D A  + +  Y    GQ
Sbjct: 165 KGNYMVNWCPKDGALSDIEVEYDTHKGQ 192


>gi|90101541|sp|Q6LUW1|SYV_PHOPR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 953

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 66/303 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+ +N D  K  F P+++ V G DI+ F    W A ++      
Sbjct: 472 VLDTWFSSALWTFGTQGWPENTDALKT-FHPSEVLVSGFDIIFF----WVARMIMMTMHF 526

Query: 281 ----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV------------ 322
                 N  +P K V+  G I    G+K+SKS GNV+DPI++I+ +G+            
Sbjct: 527 VKDEEGNAQVPFKTVYMTGLIRDENGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMM 586

Query: 323 -------------------------DALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                    DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 587 QPKLAAKIEKQTRKAFEGGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNK 644

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  SR V M  +++D GM    GA   F+ +D+ I S      +E   ++ N  +  A
Sbjct: 645 LWN-ASRYVLMNTEEHDCGM--AEGAELEFSLADQWITSQFEVAAKEFNAHLDNYRLDMA 701

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +   +     D Y +  KP   K T   + +T  Y  + V+ +   L    +P +  
Sbjct: 702 ANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRAT-RYTLITVLEKTLRLAHPILPYITE 760

Query: 472 KIF 474
            I+
Sbjct: 761 SIW 763


>gi|319949127|ref|ZP_08023219.1| valyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437199|gb|EFV92227.1| valyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 878

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 25/197 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +       +F+P  + V G DIL     +W A ++      
Sbjct: 433 VLDTWFSSALWPFSTMGWPERT-ADLERFYPTSVLVTGYDIL----FFWVARMMMFGTFV 487

Query: 281 --------SANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                   +A   +P   VF HG +  + G+K+SKS GN IDP++ ++  G DALR+ L 
Sbjct: 488 GRRLGGDKAAPGTVPFTDVFLHGLVRDEHGQKMSKSKGNGIDPLDWVDRFGADALRFTLA 547

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           R    G D     D  +   N   A  + N  +   +++     G +P     T++D  I
Sbjct: 548 RGAHPGGDLSVGDDSAQASRN--FATKLFN--ATRFALMNGAKVGPVPDAADLTDADRWI 603

Query: 391 LSVCSRVLQEIRENMQN 407
           L    +V + + E ++ 
Sbjct: 604 LHRLGQVRETVDEALER 620



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 13/72 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  +  PN     H+GHA +  + DVL R  R+ G +VL+  G D           +AG+
Sbjct: 27 SVVLPPPNVTGSLHMGHALDHTLMDVLTRRRRMQGYEVLWLPGMD-----------HAGI 75

Query: 68 TTKVFVDQNSRN 79
           T+  VD+  R+
Sbjct: 76 ATQTLVDRKLRD 87


>gi|312148470|gb|ADQ31129.1| valyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 875

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFVFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNNENVDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 921

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN+I P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIIVPKKIMDQLGGDILRLWV 620



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|197334735|ref|YP_002155515.1| leucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690268|sp|B5FBK7|SYL_VIBFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197316225|gb|ACH65672.1| leucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 858

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 8/172 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   +  +N    ++   +L   YD   +F   T + ++   +  + K+  KG +Y
Sbjct: 92  KNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPE-YYRWEQEFFTKLYSKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K   S  +   D+    +++V    DG  +     PV+  +   +F +++ Y
Sbjct: 151 KKTSSVNWCPNDQTVLANEQV---EDGCCWRCD-TPVEQKKIPQWFIKITEY 198


>gi|134046058|ref|YP_001097544.1| valyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132663683|gb|ABO35329.1| valyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 886

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 17/137 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDT 105
            +     TK                D+N    R     L IS D   ++I T    +   
Sbjct: 91  VEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVRSLGISIDWDREYI-TMNPDYVRK 149

Query: 106 CRILWKKISDKGDIYKG 122
            +  + K+ +KG IY+G
Sbjct: 150 SQTAFLKMYEKGLIYRG 166



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y    +  ++   
Sbjct: 452 VLDTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYTIVRSLAITGKK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  + V +       G K+SKS GNV++P E+ +  G DALR +
Sbjct: 511 PWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW 554


>gi|330879980|gb|EGH14129.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 816

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 13/187 (6%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH     I DVLAR  R+ G +VL   G D  G     AA  +  +   +  QN R+ +
Sbjct: 1   MGHVRNYTINDVLARQMRMKGFNVLMPMGWDAFGLPAENAALASNKSPSEWTRQNIRDMK 60

Query: 82  DMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           +    L +S D    + T +  ++   +  + K+ +KG  YK      +   D+    ++
Sbjct: 61  EQLSPLGLSIDWSREVATCDPDYYKWNQWFFLKMLEKGIAYKHTQVVNWDPVDKTVLANE 120

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS---YYESHPEFILPIER---- 192
           +V  G  G    A    V+  E  GY+F ++ Y ++LL      E  PE +  ++R    
Sbjct: 121 QVINGR-GWRSGAL---VERKEVPGYYFAITKYAEELLKDIDSLEGWPEMVRSMQRNWIG 176

Query: 193 RNEVISF 199
           ++E +SF
Sbjct: 177 KSEGLSF 183


>gi|297809613|ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata]
 gi|297318527|gb|EFH48949.1| EMB2369 [Arabidopsis lyrata subsp. lyrata]
          Length = 972

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + A
Sbjct: 113 KPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQYA 172

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K    +N   FR     L  SY  D  + TTE  ++   + ++ ++  +G  Y
Sbjct: 173 IETGTHPKTTTLKNIDRFRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKRGLAY 232

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ V    DG      H PV       +  +++AY D+LL
Sbjct: 233 QAEVPVNWCPALGTVLANEEVV----DGVSERGGH-PVIRKPMRQWMLKITAYADRLL 285



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 43/185 (23%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P +V+ E G D+LR +   E+  G   F D     K  N     G+   
Sbjct: 729 KMSKSRGNVVNPDDVVLEHGADSLRLY---EMFMGP--FRD----SKTWNTSGIEGVHRF 779

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI--- 418
           ++R+  +++    G+  + G+F   D +I++     L+++R       +H+ +A+V    
Sbjct: 780 LARTWRLVI----GLPQSDGSF--KDGTIVTDDEPTLEQLR------TLHKCIAKVTEEI 827

Query: 419 ------SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                 + +S +    +A   W      P R          +I    +LL  + P +A +
Sbjct: 828 ESTRFNTGISGMMELVNAAYKW---NNQPRR----------IIEPFVLLLSPYAPHMAEE 874

Query: 473 IFDIL 477
           ++  L
Sbjct: 875 LWSRL 879


>gi|325135488|gb|EGC58106.1| leucyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325143787|gb|EGC66104.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|293606889|ref|ZP_06689237.1| leucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292814741|gb|EFF73874.1| leucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 889

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 41  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 100

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   L I +   +   + +++   + L+ K+ +KG 
Sbjct: 101 IKSKVPPAKWTYDNIAYMKKQMKAMG--LAIDWTREMCACDPQYYKWNQWLFLKMLEKGV 158

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V    DG+ + +    V+  E  GY+ R++ Y D+LL 
Sbjct: 159 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYLRITDYADELLG 214


>gi|294010028|ref|YP_003543488.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292673358|dbj|BAI94876.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 838

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ + Y+     YP+ + HIGH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  EKPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLARFRRMTGHEVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N  N +     L  + D    + T    ++   + L+  + + G +Y
Sbjct: 91  MEKNVHPGKWTYENIANMKAQLKKLGFALDWSRELATCHPDYYGHEQALFLDMLEAGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +   +  +   D     +++V    DG+ + +   PV+  +   +F +++ + D LL+
Sbjct: 151 RKESAVNWDPVDMTVLANEQVI---DGKGWRS-GAPVEKRKLSQWFLKITQFADDLLA 204



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 34/178 (19%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L + EK+SKS  NV+DP ++I + G DA+R+F++ +    +D  + + G++         
Sbjct: 609 LGRVEKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPERDLPWTEAGIE--------- 659

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G    ++R   +  +   G           D+++     + +  + ++++    ++A+A+
Sbjct: 660 GSWRFINRLWRLFGEADKGA-------EGQDKTLDRKLHQTIDGVAKDIEALSFNKAVAK 712

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  L + V+            K  P  + +        IR LA+L+    P LA + +
Sbjct: 713 IYELTNAVE------------KARPSASRSA------AIRALALLVAPMTPHLAEEAW 752


>gi|240047297|ref|YP_002960685.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984869|emb|CAT04862.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 793

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 17/152 (11%)

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P+    + ++F K G K    +     W         Y+ Y+  ++  +YL     LD+P
Sbjct: 449 PLASNKKWLTFSKDGQKYRRETNTMPQWA---GSSWYYLAYILKNSDGSYLN----LDSP 501

Query: 249 DGSK--AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-H 298
              +   K+ P DL++ G++    H IY   W   L  A +        K+ + G +L  
Sbjct: 502 QALERFKKWLPVDLYIGGQEHAVGHLIYSRFWHKVLYEAGIVNTHEPFFKIVNQGMLLGS 561

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            G K+SKS GNVI+P E++E  G DALR FL+
Sbjct: 562 DGSKMSKSKGNVINPDEILELYGADALRLFLM 593



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K Y      YP+A   H+GH       D+++R  RL G DVL   G D  G    +
Sbjct: 26  KSLKKFYALDMFPYPSAAGLHLGHPLGYTATDIISRLKRLQGYDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G     F  +N  NFR        SYD
Sbjct: 86  YAIKTGNHPADFTAKNIENFRRQIKAFGFSYD 117


>gi|229491212|ref|ZP_04385040.1| leucyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321950|gb|EEN87743.1| leucyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 948

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV ARFHR+ G +VL T G D  G    + A 
Sbjct: 60  DKLFVQDMFPYPSGSGLHVGHPLGYIATDVFARFHRMQGRNVLHTLGYDAFGLPAEQYAV 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N  N +     L + +D+
Sbjct: 120 QTGTHPRTTTESNIANMKRQLRRLGLGHDE 149


>gi|190893972|ref|YP_001980514.1| leucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|238692504|sp|B3PS46|SYL_RHIE6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190699251|gb|ACE93336.1| leucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLD 121



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/125 (20%), Positives = 62/125 (49%), Gaps = 13/125 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++            +
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPERDVIWSEAGVEG----------AH 680

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS---RVLQEIRENMQNQLIHRALAQV 417
             ++ +  ++ +  G++ T  A   S+   L++     + L+ ++ +      ++A+A++
Sbjct: 681 RFTQRLWRLISEAAGVLSTVAAAPASEGEALAISQAAHKTLKAVQNDYDKLWFNKAVARI 740

Query: 418 ISLVS 422
             LV+
Sbjct: 741 YELVN 745


>gi|157164836|ref|YP_001467047.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|189082987|sp|A7ZE39|SYL_CAMC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112800438|gb|EAT97782.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 821

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR +R  G +VL   G D  G     AA   
Sbjct: 36  KKYILSMFPYPSGRIHMGHVRNYSIGDALARSYRKSGYNVLHPIGFDSFGMPAENAAIKH 95

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIY-KG 122
            +  K++  +N    +     L  S+     + T++  +    +  + K+ +KG +Y K 
Sbjct: 96  KIHPKIWTYENIDYMKKELASLGFSFSKKRILATSDPLYTKWEQSFFIKMFEKGLVYRKN 155

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               W    D+    +++V    DG+ +   ++ VQ  E  GY+F ++ Y
Sbjct: 156 AIVNWCEY-DQTVLANEQV---EDGKCWRCGNDVVQ-KELPGYYFNITKY 200



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G+K+SKS GNV+DP ++I   G D  R F++
Sbjct: 577 LLTQGMVLKDGKKMSKSKGNVVDPDDIINRYGADTARLFIL 617


>gi|326773594|ref|ZP_08232877.1| leucine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636824|gb|EGE37727.1| leucine--tRNA ligase [Actinomyces viscosus C505]
          Length = 993

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK ++     YP+ +  H+GH    I  DV+ARF R+ G +VL+T G D  G    + 
Sbjct: 53  DKEKFFLLDMFPYPSGKGLHVGHPLGYIATDVVARFTRMTGKNVLYTMGYDAFGLPAEQY 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
           A   G   ++  + N  N R     L +S+D          D++R T+
Sbjct: 113 AVTTGQHPRISTEANIANMRRQLRRLGLSHDPRRSLATIDVDYVRWTQ 160


>gi|260887853|ref|ZP_05899116.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838721|ref|YP_004413301.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862359|gb|EEX76859.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746485|gb|AEB99841.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 824

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 20/180 (11%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     AA   GV
Sbjct: 35  YVLEMFPYPSGNLHMGHVRNYSIGDVIARFKKMQGCNVLHPMGFDAFGMPAENAAIKHGV 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR--------ILWKKISDKGDI 119
               +   N  N +     + +SYD        R   TCR         L++    KG  
Sbjct: 95  KPADWTYSNIENMKRQQMSMGLSYD------WSREAVTCRPEYYRWTQWLFELFYKKGLA 148

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   S  W         N+  +    DG+ +    + V   +   +F +++ Y D+LL+
Sbjct: 149 YKKEASVNWCDTCGTVLANEQVI----DGKCWRCD-SEVHKKDLSQWFLKITDYADELLA 203



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 21/184 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           K  +W P D ++ G +    H +Y   F        LL  + P  + + + G ++  G K
Sbjct: 524 KVNYWAPVDQYIGGIEHAILHLLYSRFFTKVLRDEKLLDFDEPF-QNLLTQGMVIKDGAK 582

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+ P E+I++ G D  R F++      +D  +   G++        N +  +V
Sbjct: 583 MSKSKGNVVSPEEIIQKYGADTARLFILFAAPVERDLEWSDQGVEGAFR--FLNRVWRIV 640

Query: 363 SR---SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVI 418
           +    ++   + DYD         T  ++S+     + ++++ E++  + + + A++ V+
Sbjct: 641 AHFEDAIREGIDDYDH-----STLTAEEKSLRRTLHQTIKKVTEDVGERFMFNTAISAVM 695

Query: 419 SLVS 422
            LV+
Sbjct: 696 ELVN 699


>gi|209694117|ref|YP_002262045.1| valyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008068|emb|CAQ78209.1| valyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 953

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 66/303 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+ +N D  K  F P+++ V G DI+ F    W A ++      
Sbjct: 472 VLDTWFSSALWTFGTQGWPENTDALKT-FHPSEVLVSGFDIIFF----WVARMIMMTMHF 526

Query: 281 ----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV------------ 322
                 N  +P K V+  G I    G+K+SKS GNV+DPI++I+ +G+            
Sbjct: 527 VKDEEGNAQVPFKTVYMTGLIRDENGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMM 586

Query: 323 -------------------------DALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                    DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 587 QPQLAKKIEKATRKTFEGGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNK 644

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  SR V M  +++D GM    GA   F+ +D+ I S      +E   ++ N  +  A
Sbjct: 645 LWN-ASRYVLMNTEEHDCGM--AEGAELEFSLADQWITSQFEVAAKEFNAHLDNYRLDMA 701

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +   +     D Y +  KP   K T   + +T  Y  + V+ +   L    +P +  
Sbjct: 702 ANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRAT-RYTLITVLEKTLRLAHPILPYITE 760

Query: 472 KIF 474
            I+
Sbjct: 761 SIW 763


>gi|116873455|ref|YP_850236.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466497|sp|A0AKC5|SYI_LISW6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116742333|emb|CAK21457.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 921

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 20/176 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   L  +Y  + E I+  E  N +    +    ++   R   D    G   P  P
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPDGFTHPGSP 512

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++         P+ ++    PADL++ G D  R  F++   
Sbjct: 513 NGEFTKETDIMDVWFDSGSSHQAVLNA--RPELTR----PADLYMEGSDQYRGWFNSSLT 566

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A  ++   P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 567 TAVAITGEAPY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|157164498|ref|YP_001466839.1| valyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801275|gb|EAT98619.1| valyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 918

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 28/238 (11%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----SANLPLP-KKVFSHGFILHK-GEK 302
           +G  A+F+P +L + G DIL F    W A ++    +A   LP   ++ H  +  + G K
Sbjct: 523 EGDLAEFYPNNLLITGFDILFF----WVARMMFQGENALGKLPFDDIYLHALVKDEFGRK 578

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP++ I E   D LR+ L      G+D       +K+     + N    L 
Sbjct: 579 MSKSLGNVIDPLDSINEYSADVLRFTLTLLAVQGRDIKLSDAKMKQ-----VRNFTNKLY 633

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSR---VLQEIRENMQNQLIHRALAQVIS 419
           + S  ++L   +   P         +  + + SR    ++E+REN+     + A   +  
Sbjct: 634 NASKYLMLN--ESKFPNLEDIKLQTKLGIYMNSRFNECVREVRENIDAYRFNDAANTLYK 691

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D + D    W ++ +  D+AS     +  + ++   LL  F+P L+  +F  L
Sbjct: 692 FL--WDEFCD----WGIELSKADKASVKELGS--IFKEAMKLLNPFMPFLSEYLFQEL 741


>gi|325201468|gb|ADY96922.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|304382100|ref|ZP_07364611.1| leucine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336698|gb|EFM02923.1| leucine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 958

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R+K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  DRKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G    V   QN + +R   D +   +D
Sbjct: 89  AIQTGQHPAVTTAQNIQRYRQQLDRIGFCFD 119


>gi|118615970|ref|YP_904302.1| leucyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166231621|sp|A0PKG2|SYL_MYCUA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118568080|gb|ABL02831.1| leucyl-tRNA synthetase LeuS [Mycobacterium ulcerans Agy99]
          Length = 976

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+HR+ G +VL   G D  G    + A 
Sbjct: 77  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVFARYHRMKGRNVLHALGFDAFGLPAEQYAV 136

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 137 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 165


>gi|40063251|gb|AAR38078.1| leucyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 873

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 6/180 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++K +  +   YP+ + H+GH     I D+L+R+HR+ G +VL   G D  G     
Sbjct: 29  VQGKKKYFCLSMFPYPSGKLHMGHVRNYTIGDLLSRYHRMQGYNVLQPMGWDAFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    R     L   I +D    T ++ ++   + L+ ++ +KG 
Sbjct: 89  AAIQNKVPPAEWTYDNINYMRKQLKSLGLAIDWDREFATCDQDYYRWNQWLFLRMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +   D+    +++V  G  G    A    ++  E  GY+  ++ Y ++LL+
Sbjct: 149 AYKKTQVVNWDPVDQTVLANEQVIDGR-GWRTGAL---IERREIPGYYLGITQYAEELLN 204


>gi|42528163|ref|NP_973261.1| isoleucyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81411431|sp|Q73JB2|SYI_TREDE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|41819208|gb|AAS13180.1| isoleucyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 1100

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 27/246 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +PAD    G D  R    ++   +L+A L   P  K    +G +L + G+K+SKSL N
Sbjct: 576 KNFPADFISEGLDQTR--GWFYTLTILAAALFDEPAFKNCIVNGLVLAEDGKKMSKSLRN 633

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSM 368
             DP EVI++ G DALR FL+       D   Y  +G++  +   L   I    S S  +
Sbjct: 634 YTDPNEVIKQFGADALRLFLMNSNVVKADDLKYSDEGVRDVLKGIL---IPFWNSYSFYI 690

Query: 369 ILKDYDGMIPTPGAFTESDES----------------ILSVCSRVLQEIRENMQNQLIHR 412
              + DG+ P   A  +  +                 ILSV  +++ ++ E +    + +
Sbjct: 691 TYANIDGVKPPHNAKVDGKDEGVEEFLAKLNNPLDLWILSVTEKLVADVTEALDKYDLSQ 750

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLAN 471
           A+  ++  +  ++ ++  +      K+  D   +  Y T+   +++ +++    VP +  
Sbjct: 751 AIPPMVEYIDLLNNWYIRRSRRRFWKSENDGDKSQAYETLYRALKKFSLVAAPVVPFITE 810

Query: 472 KIFDIL 477
            I+  L
Sbjct: 811 SIWQNL 816


>gi|15889997|ref|NP_355678.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|32171574|sp|Q8UBV2|SYL_AGRT5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15157966|gb|AAK88463.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIY 120
              V  K +  QN    R     + +S  D+ R   T +  ++   + L+    +KG +Y
Sbjct: 93  QNKVHPKDWTYQNIATMRGQLKSMGLSL-DWTREFATCDVEYYHRQQALFVDFMEKGLVY 151

Query: 121 K 121
           +
Sbjct: 152 R 152



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 9/123 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       AN    
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPDRDVIWSEAGVEG------ANRFVQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVIS 419
            V R +    +   G+ P P   TE +    S    + L+ ++E++     ++A+A++  
Sbjct: 685 RVWRIIGEAAEQLKGVKPKPA--TEGEGLAASKAAHKTLKAVQEDLDKLAFNKAIARIYE 742

Query: 420 LVS 422
           LV+
Sbjct: 743 LVN 745


>gi|325206804|gb|ADZ02257.1| leucyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 878

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 34  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 94  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 154 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 206

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 207 DLDKLEHWPEQVKTMQR 223


>gi|325268322|ref|ZP_08134955.1| leucyl-tRNA synthetase [Prevotella multiformis DSM 16608]
 gi|324989464|gb|EGC21414.1| leucyl-tRNA synthetase [Prevotella multiformis DSM 16608]
          Length = 973

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +V   +N   +R+  D +  S+D
Sbjct: 88  YAIQTGQHPEVTTQKNIARYREQLDKIGFSFD 119



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 96/205 (46%), Gaps = 40/205 (19%)

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +A+ P P  V+  G+ +   EK+SKS+ NV++P +++E+ G D LR + +          
Sbjct: 732 TADRPTPAAVYKCGWAI---EKMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPVEASKP 788

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D +G+         +G    + +   +  ++ DG  P       S ES+ SV  R++++
Sbjct: 789 WDTNGI---------DGCFRFLKKFWKLYQQELDGGKP-------SKESLKSV-HRLIKK 831

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +  +++    + A++  +  V+E+ +   A +                    E+++++ +
Sbjct: 832 VTGDIEQFSYNTAISAFMICVNELGQQKCASR--------------------ELLKKMIV 871

Query: 461 LLQAFVPKLANKIFDILFVADENRC 485
           L+  F P +A ++++ L    ++ C
Sbjct: 872 LIAPFAPHMAEELWEQLGGETKSVC 896


>gi|307297022|ref|ZP_07576838.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306877548|gb|EFN08776.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 838

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ + Y+     YP+ + HIGH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  EKPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLARFRRMTGHEVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N  N +     L  + D    + T    ++   + L+  + + G +Y
Sbjct: 91  MEKKVHPGKWTYENIANMKAQLKKLGFALDWSREVATCHPDYYGHEQALFLDMLEAGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +   +  +   D     +++V    DG+ + +   PV+  +   +F +++ + D LL+
Sbjct: 151 RKESAVNWDPVDMTVLANEQVI---DGKGWRS-GAPVEKRKLSQWFLKITQFADDLLA 204



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 81/178 (45%), Gaps = 34/178 (19%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L + EK+SKS  NV+DP ++I + G DA+R+F++ +    +D  + + G++         
Sbjct: 609 LGRVEKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPERDLPWTEAGIE--------- 659

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G    ++R   +  +   G           D+++     + +  + ++++    ++A+A+
Sbjct: 660 GSWRFINRLWRLFGEADKGA-------EGQDKTLDRKLHQTIDGVAKDIEALSFNKAVAK 712

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  L + V++           K +  R++         IR LA+L+    P LA + +
Sbjct: 713 IYELTNAVEK----------AKPSASRSA--------AIRALALLVAPMTPHLAEEAW 752


>gi|291295460|ref|YP_003506858.1| leucyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470419|gb|ADD27838.1| leucyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 875

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 8/188 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K YI     YP+   H+GH     + D LARF    G  VL   G D  G     A
Sbjct: 32  KAGKKAYILVMFPYPSGDLHMGHLKNYTMGDALARFRVQQGYSVLHPFGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV+   +   N +  ++   ++ I YD    + T    ++   + ++ K+ +KG +
Sbjct: 92  ALKFGVSPADWTFGNIKQSKESLALMGIRYDWSREVTTCLPEYYKWNQWIFLKMYEKGLV 151

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  +      N+  +    DG+ + +    V+  E E ++ +++ Y ++LL+
Sbjct: 152 YRKKSLVNWDPVEQSVLANEQVI----DGRGWRSGAL-VEKRELEQWYLKITDYAERLLN 206

Query: 179 YYESHPEF 186
             +  P +
Sbjct: 207 DLDKLPRW 214


>gi|224097273|ref|XP_002310896.1| predicted protein [Populus trichocarpa]
 gi|222853799|gb|EEE91346.1| predicted protein [Populus trichocarpa]
          Length = 1054

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 25/188 (13%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           RNE  +  ++  K    S K F   I+ PD    ++  W  +    L+  G+ D+ D  +
Sbjct: 541 RNEEDALAEASQK---FSGKKFQ-MIQDPD----VLDTWFSSGLFPLSVLGWPDDTDDLR 592

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISK 305
           A F+P  +   G DIL F    W A +      L  ++P  +KV+ H  I    G K+SK
Sbjct: 593 A-FYPTSVLETGHDILFF----WVARMVMLGIKLGGDVPF-RKVYLHPMIRDAHGRKMSK 646

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP+EVI  V ++ L   L       K+    K G K+    D  NGI    + +
Sbjct: 647 SLGNVVDPLEVINGVSLEGLHKRLEEGNLDPKELDVAKAGQKQ----DFPNGIAECGADA 702

Query: 366 VSMILKDY 373
           +   L  Y
Sbjct: 703 LRFALVCY 710



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           HIGHA    I D + RF R+ G + L+  G D           +AG+ T+V V++
Sbjct: 133 HIGHALTAAIEDTIIRFKRMSGFNALWVPGVD-----------HAGIATQVVVEK 176


>gi|139436994|ref|ZP_01771154.1| Hypothetical protein COLAER_00128 [Collinsella aerofaciens ATCC
           25986]
 gi|133776641|gb|EBA40461.1| Hypothetical protein COLAER_00128 [Collinsella aerofaciens ATCC
           25986]
          Length = 858

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 41  KPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGYDVLHPIGFDAFGLPAENAAI 100

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                A   T   +DQ     + M    D+  D  ++T    ++   + +++K+ +KG +
Sbjct: 101 KHNTQAAAWTYKNMDQALATMKRMGFSYDL--DRMVKTCSPDYYRWGQWIFEKLWEKGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    +++V    +G+ +     P +  + E ++F+++ Y  +LL  
Sbjct: 159 YRKKNPVNWCPNCKTVLANEQV---TEGKCWRCGTEPEK-RDLEQWYFKITEYSQELLDD 214

Query: 180 YESHP 184
            E  P
Sbjct: 215 LEKLP 219



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 35/235 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFIL-HKGEKIS 304
           ++ P D ++ G +    H +Y   F        LLS + P    +   G +    G+ +S
Sbjct: 559 RWMPVDNYIGGIEHAILHLLYSRFFTKALRDLGLLSVDEPF-TNLLCQGMVKDENGDTMS 617

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P  VIE  G D +R  ++      KD  +D   ++       AN       R
Sbjct: 618 KSKGNVVPPSSVIEPYGADTMRLAILFIAPPEKDFDWDPKAVEG------ANRFIKRAWR 671

Query: 365 SVSMILKDYDGMIPTPGAFTES--DESILSVCS---RVLQEIRENMQNQLIHRALAQVIS 419
            V  +++  D  +    AF +S  DE  + +     R + +  E+      + A++ V+ 
Sbjct: 672 IVWQLVQSSDANV----AFDKSALDEVAMKLYRERHRTIAKCTEDFDRGQFNTAISAVME 727

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           LV+    Y +A +         DR   + Y    V + +  +L    P  A++++
Sbjct: 728 LVNAASAYLNATE-------GADRDKALCY---GVAKDIVSVLAPICPFWADELW 772


>gi|85057292|ref|YP_456208.1| valyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789397|gb|ABC65129.1| valyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 876

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 42/221 (19%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY-----IMYVWIDALTNYLTTTG 243
            ++D  +SR+ + WG +IP                P++     ++  W  +     +T G
Sbjct: 403 NIEDWCISRQLW-WGHQIPAWHKGKEIKVQIESPGPEWNLDCDVLDTWFSSALWPFSTLG 461

Query: 244 YLDNPDGSKAKF---WPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFIL- 297
           +   P+ +   F   +P D+ V G DIL F    + + + LL+   P  K V  HG +  
Sbjct: 462 W---PNCNTPLFQNHFPTDVLVTGYDILTFWVSKMVFQSILLTQKDPF-KDVLLHGLVRD 517

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           +KG+K+SKS GN +DP+EV+ + G DALR+FL    A G D FYD+  +    N    N 
Sbjct: 518 NKGKKMSKSKGNGVDPLEVVAKYGTDALRWFLTTNAAPGFDLFYDETKVASSWN--FINK 575

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
           + N +SR + +     D         T+ D ++LS+  + L
Sbjct: 576 LWN-ISRFIKLKTNTLD---------TDFDINLLSLPQKAL 606



 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 18/101 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN   + H+GHA+   I D++ RF ++ G DVLF  G D  G     K+ +  +
Sbjct: 36  TVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQGFDVLFLPGMDHAGIATQNKVKEQLK 95

Query: 64  NAGVTTK-----VFV-------DQNSRNFRDMADVLDISYD 92
             G+  K     +F+       +++++N R    VL +  D
Sbjct: 96  QEGLLNKTLNKEIFLKYAWQWKEKHAQNIRQQWQVLGLHLD 136


>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81786425|sp|Q9K9V0|SYI_BACHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 921

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 16/109 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L     LD P         ADL++ G D  R  F++    +  ++
Sbjct: 522 IMDVWFDSGSSHQGVLVEREELDRP---------ADLYLEGSDQYRGWFNSSLSTSVAIT 572

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              P  K V SHGF L  +G+K+SKSLGNV+ P +V++++G D LR ++
Sbjct: 573 GKAPY-KGVLSHGFTLDGEGKKMSKSLGNVVIPNDVMKQLGADILRLWV 620



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 31/69 (44%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D++ R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDMIVRYKSMAGFHAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK 70
              +GV  K
Sbjct: 105 LTKSGVDRK 113


>gi|297543846|ref|YP_003676148.1| leucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841621|gb|ADH60137.1| leucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 816

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 42/240 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K              +SR
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIK-------------AISR 624

Query: 365 SVSMILKDYDGMIPT---PGAFTES---DESILS-VCSRVLQEIRENMQNQLIHRALAQV 417
            V+ + +  D  I T   PG   +    DE+ L+ V    ++ + E+ +    + A+A++
Sbjct: 625 FVNRVERFIDKFIETRNNPGKTKDEMGKDENELNYVRHYAIKSVTEDAERFQFNTAIARI 684

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ + +Y            + D     +    +V+  L  LL  F P  + ++++ L
Sbjct: 685 MELVNALYKY------------DTDVEVKNIEFYEDVVADLIRLLAPFAPHFSEEMWEKL 732



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  ++M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLKEMGATFDWDYE 122


>gi|219681795|ref|YP_002468181.1| leucyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682350|ref|YP_002468734.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471498|ref|ZP_05635497.1| leucyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219622083|gb|ACL30239.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624638|gb|ACL30793.1| leucyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086175|gb|ADP66257.1| leucyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086748|gb|ADP66829.1| leucyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087336|gb|ADP67416.1| leucyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087840|gb|ADP67919.1| leucyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 859

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y    + YP+ + H+GH     I+DV++R+ R+ G +VL   G D  G    +AA
Sbjct: 31  KKEKYYCLPMLPYPSGKLHMGHVRNYTISDVISRYQRMLGKNVLQPMGWDAFGLPAEEAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N +  +     L  SYD    I T    ++   +  + K+ +K  +Y
Sbjct: 91  IRNNTDPFSWTQKNIKYMKKQLQSLGFSYDWSREITTCHPEYYHWEQWFFTKLYEKKLVY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            K     W S       N+  +    DG  +  Q N ++  +   +F ++  Y + L
Sbjct: 151 KKNSLVNWCSYDKTVLANEQVI----DGCCWRCQ-NKIRIKQIPQWFIKIRNYAESL 202


>gi|195977738|ref|YP_002122982.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974443|gb|ACG61969.1| isoleucyl-tRNA synthetase IleS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 932

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  D      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNARDHLA---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRAKSMSGYQAPFVPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWDNPYVTLDPSFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|167038923|ref|YP_001661908.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913487|ref|ZP_07130804.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723498|ref|YP_003903249.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166853163|gb|ABY91572.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890172|gb|EFK85317.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580559|gb|ADN53958.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 816

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 42/240 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K              +SR
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIK-------------AISR 624

Query: 365 SVSMILKDYDGMIPT---PGAFTES---DESILS-VCSRVLQEIRENMQNQLIHRALAQV 417
            V+ + +  D  I T   PG   +    DE+ L+ V    ++ + E+ +    + A+A++
Sbjct: 625 FVNRVERFIDKFIETKNNPGKTKDEMGKDENELNYVRHYAIKSVTEDAERFQFNTAIARI 684

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ + +Y            + D     +    +V+  L  LL  F P  + ++++ L
Sbjct: 685 MELVNALYKY------------DTDVEVKNIEFYEDVVADLIRLLAPFAPHFSEEMWEKL 732



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  ++M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLKEMGATFDWDYE 122


>gi|54307696|ref|YP_128716.1| valyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46912119|emb|CAG18914.1| putative Valyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 978

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 66/303 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+ +N D  K  F P+++ V G DI+ F    W A ++      
Sbjct: 497 VLDTWFSSALWTFGTQGWPENTDALKT-FHPSEVLVSGFDIIFF----WVARMIMMTMHF 551

Query: 281 ----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV------------ 322
                 N  +P K V+  G I    G+K+SKS GNV+DPI++I+ +G+            
Sbjct: 552 VKDEEGNAQVPFKTVYMTGLIRDENGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMM 611

Query: 323 -------------------------DALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                    DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 612 QPKLAAKIEKQTRKAFEGGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNK 669

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  SR V M  +++D GM    GA   F+ +D+ I S      +E   ++ N  +  A
Sbjct: 670 LWN-ASRYVLMNTEEHDCGM--AEGAELEFSLADQWITSQFEVAAKEFNAHLDNYRLDMA 726

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +   +     D Y +  KP   K T   + +T  Y  + V+ +   L    +P +  
Sbjct: 727 ANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRAT-RYTLITVLEKTLRLAHPILPYITE 785

Query: 472 KIF 474
            I+
Sbjct: 786 SIW 788


>gi|307069561|ref|YP_003878038.1| putative methionyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482821|gb|ADM89692.1| putative methionyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 535

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 7/172 (4%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADL---HV 262
           ++SR    +GIKI +      YVW DA+  YL+    L  +N       +   ++   + 
Sbjct: 229 NISRNKPYFGIKIFNKKNKYFYVWWDAIIGYLSCFKNLIKNNKKFKNIIYKNKNIKQTYF 288

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVG 321
           IGKDI+ FH I     L         K F HGF+    EK+SK+  N I   + I+  + 
Sbjct: 289 IGKDIVYFHIIILQIILKIFKYKTKNKFFIHGFLKINKEKMSKTKKNYILISKYIKLNLN 348

Query: 322 VDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
            + LRY+   ++    KD  ++      ++N +L N   N++SR +  I K+
Sbjct: 349 PEYLRYYFASKLNNKIKDINFNIKDFIYKINNELINKYINIISRIIKFIKKN 400



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query: 11 TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          TA  Y N   H+GH  E I AD+  RF +++   V F    D HG  I
Sbjct: 12 TAFPYINGNLHLGHIMEFIQADIYVRFLKMNKKKVYFIGANDIHGNLI 59


>gi|255263511|ref|ZP_05342853.1| valyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105846|gb|EET48520.1| valyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 974

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 11/119 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIY 274
           +++  DP  ++  W  +    L T G+  N      K++P    V G DIL F     + 
Sbjct: 527 VELTRDPD-VLDTWFSSGLWPLGTLGW-PNETPELDKYFPTSDLVTGSDILFFWVARMMM 584

Query: 275 WPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
               +L+ + P  +++     + HG +   KG+K+SKS GNVIDP+++I+E G DALR+
Sbjct: 585 MQLAMLTDDKPAAERIPFDTIYLHGLVRDAKGKKMSKSTGNVIDPLDIIDEFGADALRF 643



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   + D+L R+ R+ G D L+  G D           +AG+ T++ V++ 
Sbjct: 53 HMGHAFNHTLMDILIRWKRMQGFDTLWQPGLD-----------HAGIATQMVVERQ 97


>gi|281421636|ref|ZP_06252635.1| leucine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404270|gb|EFB34950.1| leucine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 953

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL+G +VL   G D +G    + A
Sbjct: 30  KKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLNGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G   +V    N   +R+  D +  S+D    +RT + +++   +  ++K+
Sbjct: 90  IQTGQHPEVTTIANINRYREQLDKIGFSFDWVREVRTCDPKYYHWTQWAFQKM 142


>gi|163784417|ref|ZP_02179302.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880314|gb|EDP73933.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 833

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 16/113 (14%)

Query: 227 IMYVWIDALTNY--LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL---- 280
           I+ VW D+  ++  +  TG+ +         WPAD+++ G D    H  ++ + LL    
Sbjct: 478 ILDVWFDSGVSHAAVLKTGFWEELK------WPADMYLEGSDQ---HRGWFQSSLLESVA 528

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           S N      V +HGF L  KG K+SKS GNV+ P ++I++ G D LR ++V E
Sbjct: 529 SYNRAPYDSVLTHGFTLDEKGRKMSKSAGNVVPPEKIIKQYGADILRLWVVTE 581



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          N   HIGHA   I+ D+L ++  + G D  F  G D HG  I +
Sbjct: 2  NGHIHIGHALNKILKDILVKYESMKGKDAPFVPGWDCHGLPIEQ 45


>gi|56416842|ref|YP_153916.1| isoleucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821279|sp|Q5PAL9|SYI_ANAMM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56388074|gb|AAV86661.1| isoleucine-tRNA ligase [Anaplasma marginale str. St. Maries]
          Length = 1101

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 38/245 (15%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLGNVI 311
           PAD   I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L N  
Sbjct: 582 PADF--ITEYIAQTRGWFYTLFVLSTGLFDRHPF-KNCICHGVVLDIKGQKLSKRLNNYP 638

Query: 312 DPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-LKKRVNADLANGIGNLVSRSVSMI 369
           DP+E+ E+ G D++R+  L   ++ G D   D+DG + +     +   I N  S S   +
Sbjct: 639 DPMEMFEKYGADSVRFTMLSHAVSIGGDLLLDQDGDVVRDTLKSVVKPIWN--SYSFFTV 696

Query: 370 LKDYDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQL--------IHRA 413
             + D M    G   ES        D+ IL  C+ ++ ++ E M++          I  A
Sbjct: 697 YANSDQM---QGRILESLEGITNIMDQYILYECACMVVKVLEAMESSSAGVRDPYNIRLA 753

Query: 414 LAQVISLVSEVDRYF---DAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A ++    +++ ++      + W   KT +   A   LY    V+  LA  +  F+P +
Sbjct: 754 CAAIVQFSDKLNNWYIRGCRGRFWMRDKTADKSDAYNTLYT---VLYHLARTIAPFLPFI 810

Query: 470 ANKIF 474
           A  I+
Sbjct: 811 AESIW 815


>gi|321309634|ref|YP_004191963.1| valyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801478|emb|CBY92124.1| valyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 802

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 35/167 (20%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKF 255
           ++D  +SR+  +WGIKIP        V++    N L    + +  + S+        +  
Sbjct: 360 MEDWCISRQ-LEWGIKIP--------VFLKGDENSLE---FFEGSEPSEDVLDTWFSSSL 407

Query: 256 WPA-----------DLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGE 301
           WP             L V GKDIL F    + +    L  + P  + ++ HG +L  K  
Sbjct: 408 WPQIVFKGGGMSPISLLVSGKDILFFWVSRMLFMGTYLDNHFPF-QNIYLHGLVLDSKNR 466

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           K+SKSL N IDPIE+ EE G+D +R F +       +  + K+ L+K
Sbjct: 467 KMSKSLNNGIDPIELSEEFGLDVVRLFFLANTHPESNIAFSKNKLEK 513


>gi|261393229|emb|CAX50850.1| leucyl-tRNA synthetase (leucine--tRNA ligase; LeuRS) [Neisseria
           meningitidis 8013]
          Length = 876

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     L  + D      T +  ++   + L+ K+ +KG +Y+
Sbjct: 92  KNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++ Y ++LL+
Sbjct: 152 KNGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDKLEHWPEQVKTMQR 221


>gi|144900375|emb|CAM77239.1| Leucyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 858

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 8/182 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K ++     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 35  RPKYFVLEMFPYPSGRIHMGHVRNYALGDVVARYKRARGFNVLHPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             GV    +  +N    R+    + +SYD    + T E  ++   + ++      G +Y 
Sbjct: 95  ERGVHPAKWTRENIAAMREQLKSMGLSYDWSRELATCEPEYYRHEQKMFLDFLKAGLVYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  +  W  + +    N+  +    DG+ + +     + +  + +F +++A+ D LL   
Sbjct: 155 KESWVNWDPVENTVLANEQVI----DGRGWRSGALVEKRLLSQ-WFLKITAFADDLLDSL 209

Query: 181 ES 182
           ++
Sbjct: 210 QT 211



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 29/183 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L + EK+SKS  NV+DP  +I   G D  R F++ +    +D  + + G+         +
Sbjct: 614 LGRSEKMSKSKRNVVDPAHIIATYGADTARLFMLSDSPPERDLEWTEAGI---------D 664

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV---LQEIRENMQNQLIHRA 413
           G    V+R   +     D +     A  E  E+   +  +V   +  + +++     ++A
Sbjct: 665 GAWRYVNRLWRLTALAVDSLPAIGTAMPELGEAATKLRRQVHKTIAAVSDDLDRFHFNKA 724

Query: 414 LAQVISLVSEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           +A++  L + +  +   DA   W ++               E +   A+L+   +P LA 
Sbjct: 725 VARIRELTNALGDFKAEDAGDWWVMR---------------EGLESAALLIAPMMPHLAE 769

Query: 472 KIF 474
           +I+
Sbjct: 770 EIW 772


>gi|257076729|ref|ZP_05571090.1| leucyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 902

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 34/174 (19%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K +++    Y N   H+GH     + D++AR+ RL G +VLF  G  E G  I   ++
Sbjct: 27  KPKFFVTVPWPYSNGSLHVGHGRTYTLGDIIARYKRLTGFNVLFPMGFHESGTPILAFSE 86

Query: 64  -----NAGVTTKVFVD------------------QNSRNFRD------MADVLDISYD-D 93
                + G T K++ +                  +N +N  D      + D +D+ Y  D
Sbjct: 87  RIRNGDPG-TIKLYRNYLMEYENPSDIDGIIESFKNPQNIADYFSRVIVKDFMDLGYSID 145

Query: 94  FIR---TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           + R   + +  + +  +  + ++  KG I KG Y   YS+ DE    +D++  G
Sbjct: 146 WTRKFTSADPFYQEIVKWQFMQLESKGLIKKGKYPILYSINDENAVGEDDIKDG 199



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 5/62 (8%)

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A + S N  LP  +   G ++  G KISKS GNVI  +E+I     D  R F+    A G
Sbjct: 588 AAIFSGN-KLPGGLMISGLVISNGAKISKSKGNVISLLEIINRYSADIYRLFM----AAG 642

Query: 337 KD 338
            D
Sbjct: 643 AD 644


>gi|328702417|ref|XP_003241894.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 872

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ +   YP+   H+GH    +IAD +ARFHR+ G +V    G D  G     AA  
Sbjct: 63  KKFYVLSMFPYPSGHLHMGHVRVYVIADSIARFHRMHGQNVFQPMGWDAFGLPAENAAIL 122

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
            G+    +   N  + +     L  S+D
Sbjct: 123 HGLPADKWTSSNIDHMKKQLQELGCSFD 150


>gi|291276430|ref|YP_003516202.1| valyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963624|emb|CBG39456.1| valyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 877

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 104/255 (40%), Gaps = 56/255 (21%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +L+ E + +  E Y    G+ Y    N V+    + +F +    Q  +    E    F  
Sbjct: 319 ALQREGFIDHIEDYVNQIGKCYRC-GNVVEPYISKQWFVKKEIAQTSMQKVQEDLMHF-Y 376

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------------- 221
           P E +N   ++++  L+D  +SR+ + WG +IP                           
Sbjct: 377 PKEWKNNYNAWMRE-LRDWCISRQLW-WGHRIPVWYCEDCAGVFASREEMPKACKHCQST 434

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--------FWPADLHVIGKDILRF 270
               DP  ++  W  +     +T G+  N    K K        F+P  L + G DIL F
Sbjct: 435 KIFQDPD-VLDTWFSSGLWAFSTLGW-GNRGAEKEKYQERDLQDFYPNSLLITGFDILFF 492

Query: 271 HAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVD 323
               W A +      L   LP  + V+ H  +  + G K+SKS GNVIDP+ +IE  G D
Sbjct: 493 ----WVARMVLSGESLLEELPF-RDVYLHALVRDEFGNKMSKSKGNVIDPLSMIEAYGAD 547

Query: 324 ALRYFLVREIACGKD 338
            LR+ L    A G+D
Sbjct: 548 NLRFSLALLCAQGRD 562


>gi|269219680|ref|ZP_06163534.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210922|gb|EEZ77262.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 894

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 17/275 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           IM  W  +  +     G+L + D   ++ +P D+   G+DI+R    +  + ++ A+L  
Sbjct: 532 IMDTWATSSLSPQIAGGWLTDED-LFSRVYPMDVRPQGQDIIR---TWLFSSMVRAHLEF 587

Query: 287 PKKVFSH----GFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +  + H    G+IL    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  +
Sbjct: 588 GENPWKHAAISGWILDPDRKKMSKSKGNVVTPMALLEKHGSDAVRYWAA-SARLGVDATF 646

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  +   LA  + N    ++SM  +     +        +D ++L+  + V+ E 
Sbjct: 647 DEQQMK--IGRRLAMKVLNASKFALSMGGEGAPADVDVAAVTEPADRAVLAGLADVVDEA 704

Query: 402 RENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLA 459
             +       RAL    S   S  D Y +  K          R++ V L V V+V  +  
Sbjct: 705 TASFDAYDHTRALELAESCFWSFCDDYLELVKDRAYSDEPSSRSARVALNVAVDVFLR-- 762

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            LL  F+P    +++        +R      + L+
Sbjct: 763 -LLAPFIPYATEEVWSWFRTGSVHRAVWPSSEPLR 796



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     D +AR+ R+ G  V +  G D++G    +  
Sbjct: 54  RENVYSIDTPPPTVSGSLHVGHVFSYTHTDTMARYQRMRGKSVFYPMGWDDNGLPTERRV 113

Query: 63  QN 64
           QN
Sbjct: 114 QN 115


>gi|226309482|ref|YP_002769444.1| leucyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226188601|dbj|BAH36705.1| leucyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 948

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV ARFHR+ G +VL T G D  G    + A 
Sbjct: 60  DKLFVQDMFPYPSGSGLHVGHPLGYIATDVFARFHRMQGRNVLHTLGYDAFGLPAEQYAV 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N  N +     L + +D+
Sbjct: 120 QTGTHPRTTTESNIANMKRQLRRLGLGHDE 149


>gi|222475207|ref|YP_002563623.1| isoleucine-tRNA ligase (ileS) [Anaplasma marginale str. Florida]
 gi|255003186|ref|ZP_05278150.1| isoleucyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255004317|ref|ZP_05279118.1| isoleucyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|222419344|gb|ACM49367.1| isoleucine-tRNA ligase (ileS) [Anaplasma marginale str. Florida]
          Length = 1101

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 38/245 (15%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLGNVI 311
           PAD   I + I +    ++  F+LS  L    P  K    HG +L  KG+K+SK L N  
Sbjct: 582 PADF--ITEYIAQTRGWFYTLFVLSTGLFDRHPF-KSCICHGVVLDIKGQKLSKRLNNYP 638

Query: 312 DPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-LKKRVNADLANGIGNLVSRSVSMI 369
           DP+E+ E+ G D++R+  L   ++ G D   D+DG + +     +   I N  S S   +
Sbjct: 639 DPMEMFEKYGADSVRFTMLSHAVSIGGDLLLDQDGDVVRDTLKSVVKPIWN--SYSFFTV 696

Query: 370 LKDYDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQL--------IHRA 413
             + D M    G   ES        D+ IL  C+ ++ ++ E M++          I  A
Sbjct: 697 YANSDQM---QGRILESLEGITNIMDQYILYECACMVVKVLEAMESSSAGVRDPYNIRLA 753

Query: 414 LAQVISLVSEVDRYF---DAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A ++    +++ ++      + W   KT +   A   LY    V+  LA  +  F+P +
Sbjct: 754 CAAIVQFSDKLNNWYIRGCRGRFWMRDKTADKSDAYNTLYT---VLYHLARTIAPFLPFI 810

Query: 470 ANKIF 474
           A  I+
Sbjct: 811 AESIW 815


>gi|94496308|ref|ZP_01302885.1| isoleucyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424054|gb|EAT09078.1| isoleucyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 988

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 31/203 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +   T +  ++   G  A+   ADL++ G D  R  F +    +       
Sbjct: 608 ILDVWFDSGS---THSFVVEGRYGEGAR---ADLYIEGSDQHRGWFQSSLLESCGTRGRA 661

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF L   G+K+SKSLGNV+DP++++ E G D LR ++          ++D 
Sbjct: 662 PY-KAVLTHGFALDGTGKKMSKSLGNVVDPLKIMSESGADILRVWVA------STDYFDD 714

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             + K V A  ++    L +    M+           GA ++ DE   +V    + E+  
Sbjct: 715 VRIGKEVLAGASDAYRKLRNTFRYML-----------GALSDYDEETEAVSYAEMPELER 763

Query: 404 NMQNQLIHRALAQVISLVSEVDR 426
            M    +HR  A    L + VD+
Sbjct: 764 YM----LHRLAALDAELRAVVDK 782



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           RE+  +     Y N   H+GHA   ++ D++ R   L G D  +  G D HG  I
Sbjct: 56  RERFILHDGPPYANGDIHMGHAMNKVLKDIIVRSQSLLGKDAPYVPGWDCHGLPI 110


>gi|56808754|ref|ZP_00366471.1| COG0060: Isoleucyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 822

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++    +   D  R+    +++KG 
Sbjct: 118 AEYLEMCRQYALSQVDKQRNDFKRLGVSADWE-NPYVTLDPQFEADQIRVF-GAMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|226320397|ref|ZP_03795965.1| valyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226234206|gb|EEH32919.1| valyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 875

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           L ++ +  D + +K   G  Y +      ++  + +F R+    DK L   E+      P
Sbjct: 326 LMEKGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQ-WFVRMKPLADKALKALENGELKFYP 384

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------- 226
            +  N    +  S ++D  +SR+   WG +IP               DP           
Sbjct: 385 KKWEN-TYKYWLSNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     ++ G+  N D     ++P +  +   DI+ F    W A ++ 
Sbjct: 443 VQDPDVLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAYDIIFF----WVARMVM 497

Query: 282 ANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L      
Sbjct: 498 AGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQ 557

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   + D       A  AN + N  S+ + + LK+    I     F + D+ +L+  +
Sbjct: 558 GQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRK--ILNDLKFNDIDKWLLTSLN 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +  +  N   + A   V         D Y +  K  +L   N D  +  +   + 
Sbjct: 613 STIFGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNSENIDIQNMAISKLLF 671

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +++  ++L  F+P +  KI+
Sbjct: 672 FLKKALLILHPFIPFVTEKIY 692



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ DVL R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R       + C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDENLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|183980092|ref|YP_001848383.1| leucyl-tRNA synthetase LeuS [Mycobacterium marinum M]
 gi|238689240|sp|B2HIA2|SYL_MYCMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|183173418|gb|ACC38528.1| leucyl-tRNA synthetase LeuS [Mycobacterium marinum M]
          Length = 976

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+HR+ G +VL   G D  G    + A 
Sbjct: 77  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVFARYHRMKGRNVLHALGFDAFGLPAEQYAV 136

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 137 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 165


>gi|329765511|ref|ZP_08257087.1| isoleucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137949|gb|EGG42209.1| isoleucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 1065

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/397 (21%), Positives = 156/397 (39%), Gaps = 86/397 (21%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H+P+ W+  +G+F++L   ++K ++  E+   F    + +N  +  +K       +SR+ 
Sbjct: 402 HHPIVWLARKGWFYKLDRLEEKAINAAENVEYFFE--QPKNRFLGIIKER-HPWCISRER 458

Query: 214 FDWGI---------------------------KIPDDPQYIMY-VWIDALT---NYLTTT 242
             WG                            K+PD P + ++  WID +T    +  +T
Sbjct: 459 I-WGCPLPVWICVDCKKQNWFFTRKEIIASAAKLPDGPNFELHRPWIDNITIKCKHCNST 517

Query: 243 G------------------YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
                              Y    D   +K  PA     G D  R     W   LL  N+
Sbjct: 518 NTKREEYVLDTWHNSGSAPYSSLTDEEYSKSIPAPFFTEGIDQTRG----WAYTLLIENV 573

Query: 285 --------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                   P    +F    +  KG K+SKS+GNVID  E++E+  VD +R++ + + +  
Sbjct: 574 ILNNGPVAPFRSFLFQGHVLDEKGGKMSKSIGNVIDGAELLEKYPVDLIRFYFIWKASPI 633

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGA--------FTE 385
           +   +  + L  R    L N + NL      +  K   +YD    T            T 
Sbjct: 634 EPLSFSTEELMSRPYQVL-NTLFNL-----HLYFKQNSEYDNFDNTKNVLWAKESNLLTS 687

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQ----VISLVSEVDRYFDAQKPWELKKTNP 441
            D  +LS   +++++I E  +    H A       VI+ +S++       + W+ +++  
Sbjct: 688 PDIWLLSKLQKLIKKITERNEVCKFHEAAKAVDDFVINNLSQIYIPITRGELWDEEESKK 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +R   +  V  +V++ L IL+    P  +  ++  +F
Sbjct: 748 NRRLAIYAVLSDVLKTLDILIHPLCPFTSEYLYQTIF 784


>gi|328676960|gb|AEB27830.1| Leucyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 813

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|255320934|ref|ZP_05362108.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380213|ref|ZP_06073368.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302103|gb|EET81346.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298407|gb|EEY86321.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 873

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 35  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 95  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 154 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 202


>gi|209551495|ref|YP_002283412.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238064870|sp|B5ZV40|SYL_RHILW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209537251|gb|ACI57186.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 876

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIGSMKAQLKAMGLSLD 121



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       A+    
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPERDVIWSEAGVEG------AHRFTQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R +S        + P P    E+  SI     R L+ +  +      ++A+A++  L
Sbjct: 685 RLWRLISEAADALSAVAPAPATEGEA-LSISQAAHRTLKAVENDYDKLWFNKAVARIYEL 743

Query: 421 VS 422
           V+
Sbjct: 744 VN 745


>gi|166154240|ref|YP_001654358.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|301335489|ref|ZP_07223733.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|259511499|sp|B0B9C6|SYI_CHLT2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|165930228|emb|CAP03713.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis 434/Bu]
          Length = 1036

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           +L + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LLGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSTDRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P ++  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFISEDMYQQL 766


>gi|297583961|ref|YP_003699741.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142418|gb|ADH99175.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 920

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 11/134 (8%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF L  +G+K+SKSLGN + P
Sbjct: 547 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFTLDGEGKKMSKSLGNTVIP 605

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             V++++G D LR + V  +    D     D + K+V A++   I N    +   +L + 
Sbjct: 606 ANVMKQLGADILRLW-VASVDYQAD-VRVSDAILKQV-AEVYRKIRN----TFRFLLGNL 658

Query: 374 DGMIPTPGAFTESD 387
           DG +P+  A +  D
Sbjct: 659 DGFVPSEHAVSFDD 672



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 23/52 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A    G
Sbjct: 58  YANGDIHMGHALNKILKDFIVRYKSMSGFHAPYVPGWDTHGLPIETALTKKG 109


>gi|190410079|ref|YP_001965603.1| probable methionyl-tRNA synthetase [Sinorhizobium meliloti]
 gi|125631109|gb|ABN47110.1| probable methionyl-tRNA synthetase [Sinorhizobium meliloti SM11]
          Length = 769

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 96/508 (18%), Positives = 193/508 (37%), Gaps = 41/508 (8%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +++ +    PN   H+GH +   + ADV  RF R++G+     TG+D+    +   A+  
Sbjct: 126 VFVFSTPPTPNGDLHLGHLSGPYLGADVFVRFQRMNGVAAYHLTGSDDFQSYVVARARQK 185

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
                    Q +   R    ++DI  D +  T T+  + +  +  + ++   G + +   
Sbjct: 186 NHEPLQVAAQYAAEIRATLSLMDIMIDQYTVTGTDPTYREGLQDFFSRLVRSGAVQRRTD 245

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE--- 181
           +  +      Y  + +V             N  +   E  +   +   +  L S  E   
Sbjct: 246 AALFDAETRKYLYEVDVGGRCPNCSAPTGGNICEECGEPNFCVDIVNAKSNL-SIAEPVR 304

Query: 182 -SHPEFILPIER-RNEVISFVKSG-----LKDLS---LSRKTF--------DWGIKI--P 221
            +   F LP+   R  V++  ++G     L++L+     R+ F        +WG+    P
Sbjct: 305 GTADRFSLPLHNFRETVLAHHRTGKVSPRLQELARRVFEREEFHLPLTHPSEWGVPPVEP 364

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILRFHAI 273
            + + +++VW +    +L     L    G   + W AD        +H  G D   +H I
Sbjct: 365 VEGRQVIWVWPEMAYGFLHGIAELGRRHG---RDWSADAPQRDWKIVHFFGYDNSFYHTI 421

Query: 274 YWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +P    L   +     +   + F L  GEK S S  + I   +++    VDA+RY+L  
Sbjct: 422 LYPVLYALAYPDWACDIEYNVNEFYLLDGEKFSTSRRHAIWGKDILSSETVDAVRYYLCL 481

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++    +  ++  L       ++   + I   +DG  P  G ++    + L
Sbjct: 482 TRGETERTNFELAACQAVISETLIGRWQGWLNGLGAHIAALFDGRAPDAGVWSPIQSAFL 541

Query: 392 SVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     L    I        ++  + ++  LV +V R+  A +         D   TV+ 
Sbjct: 542 ARLQTRLDAIAIHYGADGFSLNGVMRELNGLVDDVIRFSKAHQSLSGNPGTHDEWRTVIA 601

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   R LA      +P+ A K+ + +
Sbjct: 602 LELAAARLLAQCAAPVMPRFAGKLAEAI 629


>gi|15617043|ref|NP_240256.1| leucyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11134968|sp|P57519|SYL_BUCAI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|25292978|pir||F84981 leucine-tRNA ligase (EC 6.1.1.4) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039108|dbj|BAB13142.1| leucyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 859

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 8/177 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y    + YP+ + H+GH     I+DV++R+ R+ G +VL   G D  G    +AA
Sbjct: 31  KKEKYYCLPMLPYPSGKLHMGHVRNYTISDVISRYQRMLGKNVLQPMGWDAFGLPAEEAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N +  +     L  SYD    I T    ++   +  + K+ +K  +Y
Sbjct: 91  IRNNTDPFSWTQKNIKYMKKQLQSLGFSYDWSREITTCHPEYYHWEQWFFTKLYEKKLVY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            K     W S       N+  +    DG  +  Q N ++  +   +F ++  Y + L
Sbjct: 151 KKNSLVNWCSYDKTVLANEQVI----DGCCWRCQ-NKIRIKQIPQWFIKIRNYAESL 202


>gi|222823651|ref|YP_002575225.1| valyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538873|gb|ACM63974.1| valyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 870

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 66/316 (20%)

Query: 204 LKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDAL 235
           LKD  +SR+ + WG +IP                             DP  ++  W  + 
Sbjct: 393 LKDWCISRQLW-WGHQIPVYYCECSHEWASEETPTSCPKCQSANFKQDPD-VLDTWFSSG 450

Query: 236 TNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPAFLL--SAN- 283
              ++T G+  N D  K   W         P  L + G DIL F    W A ++  S N 
Sbjct: 451 LWAMSTLGW-GNKDWGKNTLWHEDDLKDFYPNSLLITGFDILFF----WVARMMFQSTNA 505

Query: 284 ---LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
              LP  K ++ H  +   +G K+SKSLGNVIDP++ ++E   D LR+ L      G+D 
Sbjct: 506 LNELPF-KDIYLHALVKDEQGRKMSKSLGNVIDPVQSVDEYSADILRFTLALLAIQGRDI 564

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVL 398
               D L       + N    L + S  ++L +     +      +   + +LS  +  +
Sbjct: 565 KLSNDKL-----IQVRNFTNKLYNASKFLLLNEEKFEDLNIENIKSTLAKYMLSRFNLCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +E+REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KEVRENLDNYRFNDAANTLYRF------FWDEFCDWGIELSKAEKSS--IKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIF 474
             LL  F+P ++  ++
Sbjct: 672 LKLLNPFMPFISEYLY 687


>gi|110632786|ref|YP_672994.1| isoleucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110283770|gb|ABG61829.1| Isoleucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 985

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D PD      WPAD+++ G D  R  FH+    +       
Sbjct: 572 ILDVWFDSGSTHAFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLIESCGTRGRA 625

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF +  +G K+SKSLGNV+ P +V+ + G D LR +++
Sbjct: 626 PY-DTVVTHGFTMDEEGRKMSKSLGNVVVPQDVMAKSGADILRLWVM 671



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K R    +     Y N   HIGHA   ++ DV+ R  ++ G D  +  G D HG     K
Sbjct: 52  KGRPLFVLHDGPPYANGNIHIGHALNKVLKDVITRSFQMRGYDSNYVPGWDCHGLPIEWK 111

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMAD-VLDISYDDFIRT----------TEKRHHDT 105
           I +  +  G    +V +++  R  R+ A   + +  ++F R           T   +H  
Sbjct: 112 IEEQYRAKGKNKDEVPINEFRRECREFATHWIKVQGEEFQRLGVVGDFKNPYTTMAYHAE 171

Query: 106 CRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            RI  +  K +  G +Y+G     +S+ +     + EV
Sbjct: 172 ARIAGELLKFAMSGQLYRGSKPVMWSVVERTALAEAEV 209


>gi|325294118|ref|YP_004279982.1| Leucyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061971|gb|ADY65662.1| Leucyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 876

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +  QN    R     + +S D
Sbjct: 93  QNKVHPKDWTYQNIATMRGQLKSMGLSLD 121



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 22/166 (13%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PADL +   D  R       AFLLS+   +  K+ S        EK+SKS  NV+DP ++
Sbjct: 602 PADLRIEETDGARR------AFLLSSGAEV--KIGSI-------EKMSKSKKNVVDPDDI 646

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I   G D  R+F++ +    +D  + + G++       +N     V R +  +  +   +
Sbjct: 647 IASYGADTARFFVLSDSPPDRDVIWSEAGVEG------SNRFVQRVWRIIGEVATELKSV 700

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            P P +  E   ++     + L+ ++E++     ++A+A++  LV+
Sbjct: 701 TPKPASEGEG-LAVSKAAHKTLKAVQEDLDKLAFNKAIARIYELVN 745


>gi|291514941|emb|CBK64151.1| leucyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 918

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+ A  H+GH    I +D+ +R+ RL G +VL   G D  G    + A
Sbjct: 30  RPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLKGFNVLHPMGYDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    V  +QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPAVTTEQNIARYREQLDKIGFSFD 119



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 92/220 (41%), Gaps = 38/220 (17%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W      A   L    +  G+ +   EK+SKS  NV++P  ++
Sbjct: 653 DVNIVRNDILDLDAFRAWMPEYKDAEFILEDGKYVCGWAI---EKMSKSFYNVVNPDYIV 709

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +  G D LR + +      +   +D +G+         +G+   + R   +   D DG +
Sbjct: 710 DNYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVHKFLRRFWRLFF-DRDGQL 759

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                  ++ E  L    + ++++ E+++N   + ++A  +  ++E+          E  
Sbjct: 760 CVTD--EKATEQELRTLHKTIKKVSEDIENFSFNTSVAAFMICLNELG---------ECS 808

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K              EV+  L +LL  F P +A +++  L
Sbjct: 809 KR-------------EVLEPLTVLLAPFAPHIAEELWAAL 835


>gi|225868956|ref|YP_002744904.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702232|emb|CAW99977.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 932

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  D      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNARDHLA---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRAKSMSGYQAPFVPGWDTHGLPIEQVLAKKGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD L++     +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLEMCRQYALSQVDKQRDDFKRLGVSADWDNPYVTLDPSFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|225870036|ref|YP_002745983.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699440|emb|CAW92935.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 932

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  D      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNARDHLA---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRAKSMSGYQAPFVPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWDNPYVTLDPSFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|169634386|ref|YP_001708122.1| leucyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688110|sp|B0VKP9|SYL_ACIBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169153178|emb|CAP02268.1| leucyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|254374282|ref|ZP_04989764.1| leucyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572002|gb|EDN37656.1| leucyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 813

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|148878500|sp|Q4AAS1|SYI_MYCHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144227432|gb|AAZ44122.2| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 886

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 35/269 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       + P        P D++  G D  R  F++    + +     
Sbjct: 518 ILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSVIYFGFS 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KK+ SHGF++  KG K+SKS GN +DP+ ++ + G D  R ++        D  Y +
Sbjct: 570 PY-KKLLSHGFVVDAKGNKMSKSRGNGVDPLLILSKYGCDIFRLWVANS-EYYNDIVYSE 627

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++ V       I   +  +V  ++ +     PT    TE D  I +   ++  EI +
Sbjct: 628 AIFEQNVE------IYRKIRNTVRFLITNLADFKPTKYELTEVDLYIFNKIQKLKNEIIQ 681

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF--------DAQKPWELKKTNPDRASTVLYVTVEVI 455
           N       R +  + + + E   ++         A K   LK+        V Y   E++
Sbjct: 682 NYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKR------RQVQYNLYELL 735

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           + L I +   +P  A +I+   F+   N+
Sbjct: 736 QVLNIAIAPIMPTTAEEIYS--FIQKNNK 762



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I  K     G  + + +
Sbjct: 61  YANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEI 120

Query: 74  DQNSRNFRD---MADV-------LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + S +F +   +A +       L   +    +T    +      L+KK+  +G +Y+  
Sbjct: 121 RRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRAL 180

Query: 124 YSGWYSLRDEAYYNDDEV 141
              ++S   ++   + E+
Sbjct: 181 KPVYWSPSSQSALAEAEI 198


>gi|328955403|ref|YP_004372736.1| valyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455727|gb|AEB06921.1| valyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 900

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 47/245 (19%)

Query: 202 SGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWID 233
           +G+KD  +SR+ + WG +IP                               + ++  W  
Sbjct: 394 AGVKDWCISRQLW-WGHRIPVFYCEDCGWTDALIEDVEICPVCGGRHVHQDENVLDTWFS 452

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +      T G+   P+  +    P    V  +DI+      W A ++ ++L    +V  H
Sbjct: 453 SQLWTFATQGWPQTPEALEGHH-PTTALVTARDIIAL----WVARMIMSSLYFLGEVPFH 507

Query: 294 GFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD--- 344
             +++       G ++SKS GN +DP+++IE  G DA+R+ L+      +D  +D +   
Sbjct: 508 DVVIYPTILAADGSRMSKSKGNGVDPMDLIERYGADAMRFNLLSLCTGNQDVRFDAEFDP 567

Query: 345 ---GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQE 400
                 +    + A      +  +   +L + DG  P P  A T +D  ILS  ++    
Sbjct: 568 KTGDFVRSARTEQARAFVTKIWNASRFLLLNMDGYTPGPPVADTAADAWILSRLAKTAAA 627

Query: 401 IRENM 405
           + + +
Sbjct: 628 VTDGI 632


>gi|257068433|ref|YP_003154688.1| leucyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559251|gb|ACU85098.1| leucyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 985

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EK+YI     YP+ A  H+GH    I  DV+AR  R+ G +VL+T G D  G    + A 
Sbjct: 58  EKMYIMDMFPYPSGAGLHVGHPLGYIATDVVARHQRMLGKNVLYTMGYDAFGLPAEQYAV 117

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  N R     L +S+D
Sbjct: 118 QTGTHPRTTTEANVANMRRQLHRLGLSHD 146


>gi|254459363|ref|ZP_05072784.1| valyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083976|gb|EDZ61267.1| valyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 873

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 12/112 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLG 308
           F+P  L + G DIL F    W A ++    + N  LP   ++ H  +   KGEK+SKS G
Sbjct: 484 FYPNTLLITGFDILFF----WVARMMMMGENFNGKLPFNHIYLHALVRDEKGEKMSKSKG 539

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           NVIDP++++ +   D LR+ L    A G+D    ++ L+  +N +  N + N
Sbjct: 540 NVIDPLDMVNKYSADILRFTLAISAAQGRDIRMSQEKLE--LNRNFTNKLYN 589



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QK 57
           + E    S  +  PN   + HIGHA    + D++ R+ R+DG   L+  GTD  G   Q 
Sbjct: 33  QEEGKNFSIMMPPPNVTGRLHIGHALTFTLQDIITRYKRMDGYKTLWQPGTDHAGIATQN 92

Query: 58  IAKAAQNAGVTTK 70
           + +    A  TTK
Sbjct: 93  VVEKQLLAEGTTK 105


>gi|154148039|ref|YP_001406781.1| valyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804048|gb|ABS51055.1| valyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 27/258 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSL 307
           +F+P  + + G DIL F    W A +        KK+  H   LH       G+K+SKS 
Sbjct: 484 EFYPNTMLITGFDILFF----WVARMFFQCEEATKKLPFHDVYLHALVKTSDGKKMSKSS 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVIDPI+ I E   D LR+ L      G+D    ++ L       L     N +  +  
Sbjct: 540 GNVIDPIDKINEYSADILRFTLALLCIQGRDIRLSEEKLI------LVRNFTNKLYNAHK 593

Query: 368 MILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +L +      +      TE  + +LS  +  ++ +REN++N   + A  ++   +   D
Sbjct: 594 FLLLNASKFDDLSQCEIKTELGKYLLSRFNECVKCVRENLENYRFNDAATEIYKFL--WD 651

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENR 484
            + D    W ++ +  ++++        + ++   LL  F+P L+  ++  L   D EN 
Sbjct: 652 EFCD----WGIELSKAEKSAITELGA--IFKEAMKLLNPFMPFLSEYLYQNLSGTDLENT 705

Query: 485 CFQSLDQRLKPGFMLHKT 502
               +D+  + G +  KT
Sbjct: 706 TSIMIDKYPQAGEINEKT 723



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG   L+  G D  G
Sbjct: 53 HIGHALTFTLQDIMTRYKRMDGFKCLYQPGMDHAG 87


>gi|126733331|ref|ZP_01749078.1| isoleucyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716197|gb|EBA13061.1| isoleucyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 963

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DGS+     ADL++ G D  R  FH+    A     + 
Sbjct: 571 ILDVWFDSGSTHAFV--LRDRADGSEDGM--ADLYLEGTDQHRGWFHSSMLQACGTMGHA 626

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P +V+++ G D LR ++ +
Sbjct: 627 PY-RGVLTHGFTLDQKGMKMSKSIGNTIAPEQVVKQYGADILRLWVAQ 673



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 52  RKPFTLHDGPPYANGHLHIGHALNKILKDMVVRSQQMMGRDARYVPGWDCHGLPI 106


>gi|72068860|ref|XP_791854.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS),
           partial [Strongylocentrotus purpuratus]
 gi|115933952|ref|XP_001191605.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS),
           partial [Strongylocentrotus purpuratus]
          Length = 248

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + H+GH     I+D +A FHRL+G  VL   G D  G     AA
Sbjct: 41  DRDKFYVLSMFPYPSGKLHMGHVRVYTISDTIAHFHRLNGKQVLHPMGWDSFGLPAENAA 100

Query: 63  QNAGVTTKVFVDQN 76
            + G+    +   N
Sbjct: 101 IDRGLQPADWTHSN 114


>gi|51891582|ref|YP_074273.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|60390687|sp|Q67SB4|SYL_SYMTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51855271|dbj|BAD39429.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 861

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 33  RPKYYALAMFPYPSGKLHMGHVRNYTIVDVIARYRRMKGYNVLHPMGFDSFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G    V+  +N          +  SYD
Sbjct: 93  QHGANPAVWTRENIAEMTAQLKQMGYSYD 121



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 106/257 (41%), Gaps = 53/257 (20%)

Query: 255 FW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           +W P D +V G +    H +Y   F        L+  + P   ++ + G +L  G K+SK
Sbjct: 533 YWMPVDQYVGGIEHAVLHLLYARFFTKVLRDMGLVKVDEPF-ARLLTQGMVLKDGSKMSK 591

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK---KRVN----------- 351
           S GN + P E+I + G DA+R F++      +D  +   G++   + VN           
Sbjct: 592 SKGNTVSPEEMIAKYGADAVRLFIMFAAPPERDLDWSDAGIEGAARFVNRFYRMVVSALP 651

Query: 352 -------------ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                        AD A+ +G L    ++      +G+       T  D  +  V    +
Sbjct: 652 AYQHARSLLPINPADPASVMGALSEAEIA------EGLAKAAPNLTAEDRELRRVIHATV 705

Query: 399 QEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + I  ++ ++   + A++ ++ + + +  Y + Q             +T   V  E +++
Sbjct: 706 KRITADLHDRFAFNTAISGLMEMTNAIYAYREKQH---------AEQNTSALVLAEAVQK 756

Query: 458 LAILLQAFVPKLANKIF 474
             +++  F P LA++++
Sbjct: 757 AVLIIAPFCPHLADELW 773


>gi|288817614|ref|YP_003431961.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787013|dbj|BAI68760.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751212|gb|ADO44695.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 1008

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 12/91 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSL 307
            +P DL V G DI+ F    W A ++      + ++P    V+ H  +   KG+K+SK+ 
Sbjct: 586 LYPTDLLVTGFDIIFF----WVARMIMMGTYFTGDVPFVD-VYIHALVRDEKGQKMSKTK 640

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP++++E  G DALR+ L      G+D
Sbjct: 641 GNVIDPLDIVERYGADALRFTLAILTQQGRD 671


>gi|296109702|ref|YP_003616651.1| valyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434516|gb|ADG13687.1| valyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 878

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +  T +LD+ +  K K +P  L   G DI+R  A Y    +  L+   
Sbjct: 449 VLDTWMDSSITPMVITKWLDDEEFFK-KHYPVQLRPQGHDIIRTWAFYTIVKSLALTGKE 507

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  + V +       G K+SKS GNV++P E++ + G DALR +
Sbjct: 508 PWEEIVINGMVFGEDGYKMSKSRGNVVEPDEIVNKYGADALRLW 551



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG       +     
Sbjct: 36  IDTPPPYPTGKLHLGHALNWTYMDIIARYKRMKGYNVLFPQGWDCHGLPTEVKVEEIHGI 95

Query: 69  TKVFVD-------------QNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKK 112
           TK  +D             +N    R+    L IS D   ++I  T K + +  ++ + +
Sbjct: 96  TKTDIDRKKFRELCVELTKKNIERMREQIKSLGISIDWSREYITMTPK-YIEKSQVAFVR 154

Query: 113 ISDKGDIYKG 122
           +   G IY+G
Sbjct: 155 MYKDGLIYRG 164


>gi|213966455|ref|ZP_03394630.1| leucyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213950904|gb|EEB62311.1| leucyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 972

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++KL++     YP+    H+GH    I  DV ARFHR+ G +VL T G D  G    + A
Sbjct: 59  KDKLFVQDMFPYPSGVGLHVGHPLGYIATDVFARFHRMQGANVLHTLGYDAFGLPAEQFA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N       L + +D
Sbjct: 119 IQTGTHPRVTTETNIGNMERQLGRLGLGHD 148


>gi|47220815|emb|CAG00022.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 797

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+ + H+GH     I+D +  F R+ G  VL   G D  G     AA 
Sbjct: 1   KKKFYVLSMFPYPSGRLHMGHVRVYTISDTIGHFQRMRGHQVLNPMGWDAFGLPAENAAI 60

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +   N ++ R+  D L + +  D  + T    ++   + L+ K+ + G  Y+
Sbjct: 61  ERGLDPEEWTKSNIQSMREQLDSLGLCFDWDREVTTCHPDYYKWTQYLFIKLYEAGLAYQ 120

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    D++V +  +G+ + +     Q + ++ +F + + Y   LL    
Sbjct: 121 KEAVVNWDPADQTVLADEQVDE--NGRSWRSGAVVEQKLLKQ-WFIKTTNYAKPLLDSLA 177

Query: 182 SHPEF 186
             PE+
Sbjct: 178 DLPEW 182


>gi|19112227|ref|NP_595435.1| cytoplasmic valine-tRNA ligase Vrs2 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|12230647|sp|O75005|SYV_SCHPO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3738176|emb|CAA21312.1| cytoplasmic valine-tRNA ligase Vrs2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 980

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 16/97 (16%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLG 308
           F+P  L   G DIL F    W A ++   L L      K+VF H  +   +G K+SKSLG
Sbjct: 603 FYPTTLMETGWDILFF----WIARMVMLGLKLTGKIPFKRVFCHALVRDAQGRKMSKSLG 658

Query: 309 NVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
           NV+DPI+VIE + + AL   L+      RE+   K G
Sbjct: 659 NVVDPIDVIEGISLQALHDKLLVGNLDSREVEKAKKG 695


>gi|239500747|ref|ZP_04660057.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|212702192|ref|ZP_03310320.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
 gi|212674397|gb|EEB34880.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
          Length = 837

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 24/203 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 32  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARCKRMQGFNVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWK-----KIS 114
                    +   N  N R     L  SYD        R   TCR     W+     ++ 
Sbjct: 92  IKHNTHPAKWTYANIDNMRAQLRRLGYSYD------WSREVATCRPEYYRWEQSFFLRLL 145

Query: 115 DKGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +KG +Y K     W         N+  +    DG  +    + V+  +   +F R++AY 
Sbjct: 146 EKGLVYRKKAPQNWCPSCHTVLANEQVI----DGLCWRCDSH-VEQKDLTQWFLRITAYG 200

Query: 174 DKLLSYYE----SHPEFILPIER 192
           D+LL   +      P+ +L ++R
Sbjct: 201 DELLQDLQKLEGGWPDRVLSMQR 223



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 10/87 (11%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-KKVFSHGFILHKGEKI 303
           K+W P D ++ G +    H +Y   F             L  P   + + G +L  G K+
Sbjct: 531 KYWLPVDQYIGGVEHAILHLLYARFFTKVLRDLGFYPEGLDEPFTNLLTQGMVLKDGSKM 590

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330
           SKS GNV+DP  +I + G D +R F +
Sbjct: 591 SKSKGNVVDPTAMIAKYGADTVRLFCL 617


>gi|123478984|ref|XP_001322652.1| Valyl tRNA Synthetase [Trichomonas vaginalis G3]
 gi|121905502|gb|EAY10429.1| Valyl tRNA Synthetase, putative [Trichomonas vaginalis G3]
          Length = 672

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 16/196 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +     +  G+  N +    +++P  +   G DIL F    W +
Sbjct: 192 VTVEQDPD-VLDTWFSSALLPFSGVGWPSNEERLN-RYFPNSILETGWDILTF----WVS 245

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  +L L  KV  H  +LH      +G K+SKSLGNVIDP  VI  + ++ L   +  
Sbjct: 246 RMVMMSLTLTNKVPFHTILLHPLVRDAQGRKMSKSLGNVIDPRHVINGIELEDLVAEIEN 305

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                K+     DG K    AD  NGI    + ++ + L  + G   T         S  
Sbjct: 306 STFDDKEKKIAIDGRK----ADFPNGIPQCGTDAMRLALCSFAGANRTANLNVSVIVSYR 361

Query: 392 SVCSRVLQEIRENMQN 407
           + C+++   +R  + N
Sbjct: 362 NFCNKMWNAVRFALPN 377


>gi|305664281|ref|YP_003860569.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378850|gb|ADM28689.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 997

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 30/266 (11%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +++ VW+D+   +  +   +   +     F P D      D  R  F+ + + +  L  +
Sbjct: 528 FVVDVWLDSGMAHTASLKQIAREENFSILF-PYDWITEAIDQTRGWFYTLLFTSVALYNS 586

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  + V   G +L K G+K+SKS GNVI  ++ +++ G D LR +L+ + A   +  +D
Sbjct: 587 TPY-RSVLCQGHVLDKFGKKMSKSRGNVIWALDFMDKNGADVLRLYLLSKAAPWDNINFD 645

Query: 343 KDGLK--KRVNADLANGIG------NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            D  +  +++   L N +       +L     S I KD  G++P        D  I+   
Sbjct: 646 PDETQDIRKILDILWNSVNFAITYMDLDKWDASNIDKDLQGLLP-------EDYWIIYEL 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP--WELKKTNPDRAS--TVL 448
            R+++ +   + +  +H A+  +++ ++E    RY    +P  W L++ +P++ S   VL
Sbjct: 699 DRLIKSVDAAILSGDLHIAIRNILNFITETLSHRYITVIRPRVW-LEEDSPEKRSAYAVL 757

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
           Y+   V+  L  +L  F P ++  ++
Sbjct: 758 YI---VLSTLFKILAPFAPFISEYLY 780


>gi|269468727|gb|EEZ80349.1| methionyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 136

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K+ +++A+ Y N + H+GH  E I  D+  RF ++ G +  +    D HG  I   A 
Sbjct: 3   RRKILVTSALPYANGEIHLGHLLEYIQTDIWVRFQKMMGNECHYVCADDAHGTPIMLKAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              +T +  +   S   R  AD  D  I +  +  T    + +    ++ K++DKG I
Sbjct: 63  ELSITPEELIAGVSE--RHQADFKDFSIGFSQYHSTHSDENKEISADIYNKLNDKGFI 118


>gi|262374208|ref|ZP_06067484.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310766|gb|EEY91854.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|242373479|ref|ZP_04819053.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348842|gb|EES40444.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 916

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY------ 226
           L  +Y  + + I+  E  N +         ++   R+  D    G   P  P        
Sbjct: 463 LPVFYAENGDIIMTKETVNHIADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGEFTKET 522

Query: 227 -IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
            IM VW D+ +++    G L+N P+ S    +PADL+  G D  R  F++    A     
Sbjct: 523 DIMDVWFDSGSSH---RGVLENRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRG 575

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 576 QAPY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQVDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|228470538|ref|ZP_04055397.1| leucyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307761|gb|EEK16732.1| leucyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 938

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 31/180 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P E+IE+ G D LR + +      +   +D +G+         +G+  
Sbjct: 702 EKMSKSMFNVVNPDEIIEQYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVYR 752

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R V  +  D +G + T  A  E+    L    +++Q+I ++++    + +++  +  
Sbjct: 753 FLKR-VWSLYHDSEGQL-TVSADAEASREELRTIHKLIQKITQDIERLSFNTSVSAFMIA 810

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E+                  +A T    ++EV+R LAILL  F P +A  ++  +  A
Sbjct: 811 VGEL-----------------QKAGT---TSLEVLRPLAILLSPFAPHIAEMLWQEMRTA 850



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +++   Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D  G    Q
Sbjct: 28  RDKPSYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGYNVLHPMGYDAFGLPAEQ 87

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  ++   TT+V    N   +R+  D +   +D
Sbjct: 88  YAIQTNRHPEETTRV----NIARYREQLDNIGFGFD 119


>gi|323340625|ref|ZP_08080877.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091748|gb|EFZ34368.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 930

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D         +PAD+++ G D  R  F++    +  +S + 
Sbjct: 526 IMDVWFDSGSSHQGVCAQRD------YLTYPADMYLEGSDQYRGWFNSSLITSVAVSGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KG K+SKSLGN I P EV++++G + +R +++
Sbjct: 580 PY-KQIISQGFTLDGKGRKMSKSLGNTIVPSEVVDKMGAEIIRLWVL 625



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  + AGV  K    
Sbjct: 58  YANGNIHMGHAMNKISKDIIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVDRKTLTV 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         V+   ++F+ +   +   +D+   T           ++ K+++KG 
Sbjct: 118 ADFREKCREYALKQVEGQKKDFKRLG--IAGEWDNPYLTLHPEFEAAQIRVFGKMAEKGL 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + EV
Sbjct: 176 IYKGLRPVYWSWSSESALAEAEV 198


>gi|118497462|ref|YP_898512.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536154|ref|ZP_03079161.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|166231608|sp|A0Q693|SYL_FRATN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118423368|gb|ABK89758.1| leucyl-tRNA synthetase [Francisella novicida U112]
 gi|194372631|gb|EDX27342.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 813

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN +DP E+I+  G D +R F
Sbjct: 576 MSKSKGNTVDPQELIDRYGADTVRLF 601


>gi|219847645|ref|YP_002462078.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541904|gb|ACL23642.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 1066

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 34/348 (9%)

Query: 146 DGQYYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
           DG++ N   N + W +  E Y      +   +  +  +    ++ I    E+   V   L
Sbjct: 448 DGRFGNWLENNIDWAISRERY------WGTPIPIWTNADGSHMVCIGSLAELEEKVGRSL 501

Query: 205 KDLSLSRKTFD---W-----GI--KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKA 253
           +DL L R   D   W     G+  +IPD    +   W D+ +  +    Y  +N D  + 
Sbjct: 502 RDLDLHRPYIDEVVWEDPDHGLMRRIPD----VADCWFDSGSMPVAQWHYPFENRDVFEM 557

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
              PAD      D  R  F+ ++  + LL  + P  K V   G IL K G+K+SKS GNV
Sbjct: 558 SH-PADYICEAVDQTRGWFYTLHAVSTLLF-DRPAFKNVICLGHILDKDGQKMSKSRGNV 615

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I+P EVI   GVDALR++L      G    +  D + + +   L   + N  +  V+   
Sbjct: 616 IEPQEVINAYGVDALRWYLFTAAPPGNARRFSMDLVSESMRKFLLT-LWNTYAFFVTY-- 672

Query: 371 KDYDGMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            + D   P  G   E    D   L+  ++++Q      +   ++ A   +   V E+  +
Sbjct: 673 ANLDRWQPNSGRTAELQPIDRWALAALNQLVQTATAAFEEYDVYSAANAIEHFVDELSNW 732

Query: 428 FDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
           +  +      K+  D      Y T+   +  +A L   F+P ++ +I+
Sbjct: 733 YVRRNRRRFWKSEGDADKEAAYQTLYTCLVTVAKLAAPFIPFVSEEIY 780


>gi|119719242|ref|YP_919737.1| valyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524362|gb|ABL77734.1| valyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 809

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 155/376 (41%), Gaps = 75/376 (19%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H PV+ + ++ +F R +A  +K+L   E      +P      + ++V S   D  +SR+ 
Sbjct: 350 HTPVEIIPKKQWFVRSTALNEKVLE--EGRKVNWVPSYMYKRLENWVLSLDWDWVISRQR 407

Query: 214 F-----------DWGI-------KIPDDPQY---------------------IMYVWIDA 234
                       D G        K+P DP++                     +M  W+D+
Sbjct: 408 LFATPIPVYYCKDCGAELVVPPEKLPIDPRFDPPPFEKCPKCGSKNIVPERDVMDTWMDS 467

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KK 289
                   G+ DN D    + +PADL   G DI+R     W  +L+   + L      K 
Sbjct: 468 SITAAVHAGWPDNFD---ERLFPADLQPNGYDIIRT----WDYYLILRGVALFGRSQFKT 520

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              +G +    G  + KS GN +   EV+E+ G D+ R ++    A G+D  +  DG+  
Sbjct: 521 ALINGMVRGTDGRMMHKSYGNYVAVQEVLEKYGADSFRLWVALAAATGQDVRFSWDGV-- 578

Query: 349 RVNADLAN----GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
               D A+     + NL +R  S  ++D    +P  G  + +D  IL   +  +  + + 
Sbjct: 579 ----DYAHRFLVKVWNL-ARLASPFIEDVR-EVPL-GNLSHADHWILRELASTVTRVTQA 631

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++N     A   ++        D Y +A K   L +++     T+  V ++ ++ L++  
Sbjct: 632 LENYNFQEASQALVDFTWHKLADHYVEAVKH-RLSRSDEAAKYTLYVVLIKTLQMLSV-- 688

Query: 463 QAFVPKLANKIF-DIL 477
             F P ++ +I+ D+L
Sbjct: 689 --FAPHISEEIYVDVL 702



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 34/75 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    I T   YP+   H+G+A      D +AR+ R+ G +VLF  G D HG      
Sbjct: 37  RSRPVYVIDTPPPYPSGDLHVGNALNFSYIDFVARYKRMRGYNVLFPQGWDCHGLPTEVR 96

Query: 62  AQNAGVTTKVFVDQN 76
            + A    K  +D N
Sbjct: 97  VEKAVGKRKSEMDPN 111


>gi|83648575|ref|YP_437010.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726271|sp|Q2S9T9|SYI_HAHCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83636618|gb|ABC32585.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 941

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    A  +    P  ++V +HGF +  KG K+SKSLGN I+P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLKTAVAIKGKAPY-RQVLTHGFTVDEKGHKMSKSLGNGIEP 616

Query: 314 IEVIEEVGVDALRYFLV 330
            EV+ ++G D LR ++ 
Sbjct: 617 QEVMNKLGADILRLWVA 633



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K REK  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG     K
Sbjct: 46  KGREKFILHDGPPYANGNIHLGHAVNKILKDIIVKSKTVAGYDAPYVPGWDCHGLPIEHK 105

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
           +      AG   KV   +  R  R+ A + +    +DFIR
Sbjct: 106 VETMIGRAG--DKVGYKEFRRKCREYALEQVAKQREDFIR 143


>gi|326319246|ref|YP_004236918.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323376082|gb|ADX48351.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 897

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 10/182 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  KNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSRE--VATCDPDYYRWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLKITDYAQELLDH 205

Query: 180 YE 181
            +
Sbjct: 206 VQ 207


>gi|157872788|ref|XP_001684921.1| valyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127991|emb|CAJ06733.1| putative valyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 967

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K GL D  ++  +F+       DP  ++  W  +     +T G+  + D  K +F+P  L
Sbjct: 462 KFGLTDEQVAEASFE------QDPD-VLDTWFSSGLWPFSTLGWPTDSDDMK-RFFPNSL 513

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
              G DIL F         L     LP K+VF H  +  K GEK+SKS GNVIDP+ VI 
Sbjct: 514 METGHDILFFWVARMVMLSLHFTNKLPYKEVFLHAMVRDKNGEKMSKSKGNVIDPLYVIH 573

Query: 319 EVGVDAL 325
            V +  L
Sbjct: 574 GVSLQTL 580



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D L RFHR+ G + L+  GTD           +AG+ T+V V++     
Sbjct: 53  HLGHALTGAVQDTLIRFHRMKGDNTLYLPGTD-----------HAGIATQVVVERRVMK- 100

Query: 81  RDMADVLDISYDDFIR 96
            +     D+  D+F++
Sbjct: 101 EEGKSRHDLGRDEFMK 116


>gi|329946984|ref|ZP_08294396.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328526795|gb|EGF53808.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 993

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK ++     YP+ +  H+GH    I  DV+ARF R+ G +VL+T G D  G    + 
Sbjct: 53  DKEKYFLLDMFPYPSGKGLHVGHPLGYIATDVVARFTRMTGRNVLYTMGYDAFGLPAEQY 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
           A   G   ++  + N  N R     L +S+D          D++R T+
Sbjct: 113 AVTTGQHPRISTEANIANMRRQLRRLGLSHDPRRSLATIDVDYVRWTQ 160


>gi|317968656|ref|ZP_07970046.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 984

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 14/115 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           M VW D+ +++    G ++       +  +PADL++ G D  R  F +    +  ++ + 
Sbjct: 564 MDVWFDSGSSWAGVLGGIEGTSSRAPQLHYPADLYLEGSDQHRGWFQSSLLTSVAVNGHA 623

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
           P  K+V +HGF L  KG K+SKSLGNV+DP  ++            G D LR ++
Sbjct: 624 PY-KRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVSGGKNQKQEPPYGADVLRLWV 677


>gi|315585949|gb|ADU40330.1| leucine--tRNA ligase [Helicobacter pylori 35A]
          Length = 806

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI + + YP+ + H+GH     I D L R++RL   +VL   G D  G     AA   
Sbjct: 30  KKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLHHYNVLHPMGFDSFGMPAENAAIKH 89

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+  
Sbjct: 90  GVHPKTWTYENIEAMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRKK 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               +   D+    +++V    DG+ +      +Q  E   Y+ +++ Y ++LL   E+
Sbjct: 150 AMLNWCPNDKTVLANEQV---IDGRCWRCDTEVIQ-KELYQYYLKITNYAEELLKDLEA 204



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P K++ + G +L  G K+SKS 
Sbjct: 518 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQLITQGMVLKDGAKMSKSK 577

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GNV+ P E++++ G DA R F++      K+  ++ + L+
Sbjct: 578 GNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDNALE 617


>gi|258544244|ref|ZP_05704478.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520482|gb|EEV89341.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 923

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ T +       D+        +PADL++ G D  R  FH+       +  + 
Sbjct: 531 VLDVWFDSGTTHYAVLRQRDDIG------YPADLYLEGSDQHRGWFHSSLLTGCAIDGHP 584

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF +   G K+SKSLGNV++P +VI  +G D LR ++
Sbjct: 585 PY-KGLLTHGFTVDESGRKMSKSLGNVVEPQKVINNLGADILRLWV 629


>gi|254578966|ref|XP_002495469.1| ZYRO0B12100p [Zygosaccharomyces rouxii]
 gi|238938359|emb|CAR26536.1| ZYRO0B12100p [Zygosaccharomyces rouxii]
          Length = 886

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ +YI +   YP+   H+GH    +I+D L RF++ +G  V+   G D  G     AA 
Sbjct: 55  KKNIYILSQFPYPSGALHMGHLRVYVISDSLNRFYKQNGYKVIHPMGWDAFGLPAENAAI 114

Query: 64  NAGVTTKVFVDQN-SRNFRDMADVL-DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + G+   V+   N S+    M D+L +  +D  I T +  ++   ++++ K+ + G  Y+
Sbjct: 115 DRGIDPSVWTKDNISKMKMQMNDMLANFDWDREIATCDPEYYKFTQLIFLKLFEHGLAYR 174


>gi|212223825|ref|YP_002307061.1| valyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008782|gb|ACJ16164.1| valyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 884

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 10/256 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L  T +  +    K  F P  L   G DI+R  A Y  +  ++L+   
Sbjct: 453 VLDCWVDSSITPLIITKWGKDEKWFKHNF-PTALRPQGTDIIRTWAFYTIFRTYVLTGEK 511

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +       G K+SKS GNV+ P EVI + G DALR +       G+D  +  +
Sbjct: 512 PWDDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTAL-APPGEDHPFKWE 570

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +    N      + N + R     L+ +D            D  ILS   R+++   E 
Sbjct: 571 TVD--YNYRFLQKVWN-IYRFAERHLEGFDPEAAKGIELEPIDRWILSRLHRLIKFATEE 627

Query: 405 MQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M+    +    ++I+ V     D Y +  K + L   + +          E++  + +LL
Sbjct: 628 MEKYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKVALYELLYNVMLLL 686

Query: 463 QAFVPKLANKIFDILF 478
             FVP +  +++  LF
Sbjct: 687 APFVPHVTEELYQNLF 702



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG
Sbjct: 31 EKRPSYAIDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMTGYNVLFPQGFDNHG 84


>gi|126725543|ref|ZP_01741385.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704747|gb|EBA03838.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 968

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 39/277 (14%)

Query: 210 SRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           +++ F  GI  PD+ +    I+ VW D+ + +       D  DGS      AD+++ G D
Sbjct: 557 AKERFLGGIANPDEFEQVFDILDVWFDSGSTHAFV--LRDRADGSDDGI--ADVYMEGTD 612

Query: 267 ILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
             R  FH+    +   +   P  + V +HGF L  KG K+SKS+GN I P  ++++ G D
Sbjct: 613 QHRGWFHSSLLQSVGTTGRAPY-RNVVTHGFTLDEKGMKMSKSIGNTIVPETIVKQYGAD 671

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR ++ +         Y  D   +R+ A++  G  +   R    +      M+ +   F
Sbjct: 672 ILRLWVAQTD-------YTAD---QRIGAEILKGTADSYRR----LRNTMRFMLGSLDQF 717

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +E+D        RV       ++  ++HR LAQ+  +V      FD Q  ++   T    
Sbjct: 718 SEAD--------RVDAAEMPELERWVLHR-LAQLDEVVQTGYAKFDFQGVFQALFT---F 765

Query: 444 ASTVLYVTVEVIRQLAILLQAFVP--KLANKIFDILF 478
           A+T L      IR+  +      P  + A  + DILF
Sbjct: 766 ATTDLSAFYFDIRKDVLYCDGDTPERRAARTVLDILF 802



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 57  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGYDARYIPGWDCHGLPI 111


>gi|315226823|ref|ZP_07868611.1| leucine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315120955|gb|EFT84087.1| leucine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 1007

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 8   YISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++ +   YP+ +  H+GH    I  DV+AR+HR+ G +VL T G D  G    + A   G
Sbjct: 79  FVMSMFPYPSGKGLHVGHPLGYISTDVMARYHRMKGENVLHTMGYDAFGLPAEQFAVQTG 138

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
              +V  +QN  N +     + +S+D
Sbjct: 139 QHPRVTTEQNIANMKRQLHRMGLSFD 164


>gi|291522369|emb|CBK80662.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Coprococcus catus GD/7]
          Length = 799

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 19/184 (10%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       +V++R  R+ G +VLF  G D  G      
Sbjct: 29  DKPKFYGLVEFPYPSGAGMHVGHIKAYSGLEVVSRKRRMQGYNVLFPIGFDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       ++  DQN   F +    +  S+  D  I TT++ ++   + ++ K+ +KG  
Sbjct: 89  AIKTNTHPRIVTDQNIERFSNQMKRMGFSFDWDRVIDTTQEDYYKWTQWIFLKLFEKGLA 148

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E           + G   +  H+ V    +E ++ R++ Y 
Sbjct: 149 YRDKTLVNYCPSCKVVLSNE----------DSQGGKCDICHSDVIQKSKEVWYLRITKYA 198

Query: 174 DKLL 177
           DKLL
Sbjct: 199 DKLL 202



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 28/186 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK- 299
           D +K K+W P D +  G + +  H IY   W  FL      N P P  K  + G IL   
Sbjct: 517 DPNKLKYWMPVDWYNGGMEHVTRHMIYSRFWHRFLYDIGVVNTPEPYAKRSAQGLILGPD 576

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP++V ++ G D LR +++         F    G     N +   G  
Sbjct: 577 GTKMSKSKGNVVDPLDVADKYGADTLRTYIL---------FMGDYGASTPWNENSVRGCK 627

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +  K  D          E+  S+ +   + ++++ +++++   + A+A +++
Sbjct: 628 RFLDRVYRIFEKVTD----------ENLHSLDNPLHKAIKKVSDDIEDMKYNTAIATLMA 677

Query: 420 LVSEVD 425
           L+++ +
Sbjct: 678 LLNDFE 683


>gi|227495901|ref|ZP_03926212.1| leucine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834578|gb|EEH66961.1| leucine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 990

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 11/107 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK ++     YP+ +  H+GH    I  DV+ARF R+ G +VL+T G D  G    + A
Sbjct: 54  KEKFFLLDMFPYPSGKGLHVGHPLGYIATDVVARFTRMTGKNVLYTMGYDAFGLPAEQYA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
              G   ++  + N  N R     L +S+D          D++R T+
Sbjct: 114 VQTGQHPRISTEANIANMRRQLRRLGLSHDPRRSLATIDVDYVRWTQ 160


>gi|186475341|ref|YP_001856811.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|254782378|sp|B2JDY9|SYI_BURP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|184191800|gb|ACC69765.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 945

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 22/257 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDELQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY- 606

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 NALLTHGFTVDGEGRKMSKSLGNGIDPHEVSNRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTP-GAFTESDESILSVCSRVLQEIREN 404
            KRV       I N + R +   L D+D G    P G + E D   +++ + +  +I  +
Sbjct: 665 LKRVTESYRR-IRNTL-RFLLANLSDFDIGKHARPVGEWLEIDRYAVALTANLQADILSH 722

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQ 457
                 H  +A++ +  SE     Y D  K   L  T  D      A T LY     + +
Sbjct: 723 YDRYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSKARRSAQTALYHIAHGLLR 781

Query: 458 LAILLQAFVPKLANKIF 474
           L     +F  + A K+F
Sbjct: 782 LMAPFLSFTAEEAWKVF 798



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 18/136 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTC 106
                      A+  Q A       +++    FR +  + D  +D+  +T          
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKAGFRRLGVLGD--WDNPYKTMNFANEAGEI 171

Query: 107 RILWKKISDKGDIYKG 122
           R L  KI +KG +++G
Sbjct: 172 RAL-AKIMEKGYVFRG 186


>gi|41916|emb|CAA29642.1| unnamed protein product [Escherichia coli]
          Length = 860

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKINAYADELLN 204


>gi|84514472|ref|ZP_01001836.1| isoleucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511523|gb|EAQ07976.1| isoleucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 964

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DGS      ADL++ G D  R  FH+    A     + 
Sbjct: 572 ILDVWFDSGSTHAFV--LRDRADGSTDGM--ADLYLEGTDQHRGWFHSSMLQACGTKGHA 627

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P +V+++ G D LR ++ +
Sbjct: 628 PY-RGVLTHGFTLDQKGMKMSKSIGNTIAPEKVVQQYGADILRLWVAQ 674



 Score = 37.4 bits (85), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG        +K     Q+  
Sbjct: 63  YANGNLHIGHALNKILKDMVVRSQQMMGRDARYVPGWDCHGLPIEWKIEEKYRAKGQDKD 122

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               V   Q  R F +    +DI  ++F R
Sbjct: 123 AINVVDFRQECRKFAE--GWVDIQREEFKR 150


>gi|319651920|ref|ZP_08006043.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396412|gb|EFV77127.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 805

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KGKRKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F ++N   FR     L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTEKNINTFRRQIKALGFSYDWDREVNTTDPEYYKWTQWIFLKLYEKGL 147

Query: 119 IY 120
            Y
Sbjct: 148 AY 149



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 31/159 (19%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W   L    +   K    K+F+ G IL   
Sbjct: 514 DPEKLKEWLPVDIYIGGAEHAVLHLLYARFWHKVLYDVGIVHTKEPFQKLFNQGMILGEN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRV--- 350
            EK+SKS GNV++P E++   G D LR +      L   IA   +G         R+   
Sbjct: 574 NEKMSKSKGNVVNPDEIVASHGADTLRLYEMFMGPLEASIAWSTNGLDGSRRFLDRIWRL 633

Query: 351 ----NADLANGIGNLVS---------RSVSMILKDYDGM 376
                 +L+ GI ++           ++V  + +DY+G+
Sbjct: 634 FVEETGELSQGIQDIEEGSSLEKVYHQTVKKVTEDYEGL 672


>gi|208779258|ref|ZP_03246604.1| leucyl-tRNA synthetase [Francisella novicida FTG]
 gi|208745058|gb|EDZ91356.1| leucyl-tRNA synthetase [Francisella novicida FTG]
          Length = 813

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGVK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN +DP E+I++ G D +R F
Sbjct: 576 MSKSKGNTVDPQELIDKYGADTVRLF 601


>gi|197120011|ref|YP_002140438.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197089371|gb|ACH40642.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 925

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 17/141 (12%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E   F+  G    S  +  FD    I D       VW D+  ++       DN       
Sbjct: 506 EASRFLPEGTCCPSCGKSEFDKETDILD-------VWFDSGVSHAAVLELRDNLSS---- 554

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
             PAD+++ G D  R  FH+    +       P  K V +HGF++   G K+SKS+GNV+
Sbjct: 555 --PADMYLEGSDQHRGWFHSSLLASVGTRGRAPY-KNVLTHGFVMDGAGRKMSKSVGNVV 611

Query: 312 DPIEVIEEVGVDALRYFLVRE 332
            P +VI++ G D LR ++  +
Sbjct: 612 APEDVIKKFGGDVLRLWVAAQ 632



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K + +  +     Y N   HIGHA   I+ D++ +  R++G    +  G D HG  I
Sbjct: 45  KSKPRYVLHDGPPYANGHIHIGHALNKILKDIVLKSKRMEGFAAPYVPGWDCHGLPI 101


>gi|71893387|ref|YP_278833.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 887

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 35/269 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       + P        P D++  G D  R  F++    + +     
Sbjct: 519 ILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSVIYFGFS 570

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KK+ SHGF++  KG K+SKS GN +DP+ ++ + G D  R ++        D  Y +
Sbjct: 571 PY-KKLLSHGFVVDAKGNKMSKSRGNGVDPLLILSKYGCDIFRLWVANS-EYYNDIVYSE 628

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++ V       I   +  +V  ++ +     PT    TE D  I +   ++  EI +
Sbjct: 629 AIFEQNVE------IYRKIRNTVRFLITNLADFKPTKYELTEVDLYIFNKIQKLKNEIIQ 682

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF--------DAQKPWELKKTNPDRASTVLYVTVEVI 455
           N       R +  + + + E   ++         A K   LK+        V Y   E++
Sbjct: 683 NYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKR------RQVQYNLYELL 736

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           + L I +   +P  A +I+   F+   N+
Sbjct: 737 QVLNIAIAPIMPTTAEEIYS--FIQKNNK 763



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I  K     G  + + +
Sbjct: 62  YANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEI 121

Query: 74  DQNSRNFRD---MADV-------LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + S +F +   +A +       L   +    +T    +      L+KK+  +G +Y+  
Sbjct: 122 RRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRAL 181

Query: 124 YSGWYSLRDEAYYNDDEV 141
              ++S   ++   + E+
Sbjct: 182 KPVYWSPSSQSALAEAEI 199


>gi|304385164|ref|ZP_07367510.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329358|gb|EFL96578.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 936

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L   D  K   +PADL + G D  R  F++    +  +S + 
Sbjct: 529 IMDVWFDSGSSH---QGVLAKRDYLK---YPADLTLEGSDQYRGWFNSSLITSVAMSGHA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF L  +G K+SKSLGN I P ++I+++G + +R +++
Sbjct: 583 PY-KQVISQGFTLDGQGHKMSKSLGNTIVPADIIKKMGAEIIRLWVL 628



 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +     G   K    
Sbjct: 61  YANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQLTKEGHDRKKMST 120

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR 96
              R   RD A   +D   +DF R
Sbjct: 121 AEFRKLCRDYALKQVDKQREDFKR 144


>gi|282900674|ref|ZP_06308616.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194474|gb|EFA69429.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 860

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 32  KNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    R     L +S D    + T    ++   + ++ +    G  
Sbjct: 92  AIDRGVPPAKWTYQNIDQMRQQLKRLGLSLDWEAEVATCSSDYYRWTQWIFLQFLAAGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   A+G+ + +     + M  + +F +++AY ++LL+ 
Sbjct: 152 YQKEAAVNWDPIDQTVLANEQV--DAEGRSWRSGAIVERKMLRQ-WFLKITAYAEELLND 208

Query: 180 YESHP 184
            E  P
Sbjct: 209 LEHLP 213


>gi|260910650|ref|ZP_05917309.1| leucine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635160|gb|EEX53191.1| leucine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 958

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ AR  RL+G +VL   G D +G    +
Sbjct: 28  KSKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARHKRLEGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISD 115
            A   G    V  + N   +R+  D +  S+D    +RT +  ++   +  ++K+ D
Sbjct: 88  YAIQTGQHPAVTTETNIARYREQLDRIGFSFDWSREVRTCDPMYYKWTQWAFQKMFD 144


>gi|307104070|gb|EFN52326.1| hypothetical protein CHLNCDRAFT_36907 [Chlorella variabilis]
          Length = 1038

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G      G +A  +PADL++ G D  R  F +    +   + + P
Sbjct: 601 MDVWFDSGSSWAGVLG------GDQALNYPADLYLEGSDQHRGWFQSSLLTSVAANGHAP 654

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
             K+V +HGF+L  KG K+SKSLGNVIDP  V+   G DA
Sbjct: 655 Y-KQVLTHGFVLDDKGMKMSKSLGNVIDP-RVVMLGGKDA 692



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R+  L G    F  G D HG  I
Sbjct: 125 YANGDLHIGHALNKILKDIINRYQLLQGRKAKFVPGWDCHGLPI 168


>gi|298372833|ref|ZP_06982823.1| leucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275737|gb|EFI17288.1| leucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 930

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D +G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRQKGFNVLHPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
           A   G    V  D+N R +R   D +  S+  D  IRT++  ++
Sbjct: 89  AIQTGQHPAVTTDENIRRYRQQLDKIGFSFDWDREIRTSDADYY 132



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 44/183 (24%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADL 354
           EK+SKS+ NV++P +++E  G D LR + +      +   +D  G+       KR+ A +
Sbjct: 702 EKMSKSMYNVVNPDDIVERYGADTLRLYEMFLGPVEQSKPWDTKGIDGVHRFLKRLWALV 761

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            +  GNL+           D   PT        E  L    + +++I  +++N   + ++
Sbjct: 762 YDAQGNLL----------LDDRQPT--------EEELKTLHKTIKKITYDIENFSFNTSV 803

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  +  V+E+                    ST       +I  LA++L  F P +A +I+
Sbjct: 804 SAFMICVNEL--------------------STAKCSKRAIIEPLAVILAPFAPHIAEEIY 843

Query: 475 DIL 477
            + 
Sbjct: 844 SLC 846


>gi|270291450|ref|ZP_06197672.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280296|gb|EFA26132.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 933

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L   D  K   +PADL + G D  R  F++    +  +S + 
Sbjct: 526 IMDVWFDSGSSH---QGVLAKRDYLK---YPADLTLEGSDQYRGWFNSSLITSVAMSGHA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V S GF L  +G K+SKSLGN I P ++I+++G + +R +++
Sbjct: 580 PY-KQVISQGFTLDGQGHKMSKSLGNTIVPADIIKKMGAEIIRLWVL 625



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +     G   K    
Sbjct: 58  YANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQLTKEGHDRKKMST 117

Query: 75  QNSRNF-RDMA-DVLDISYDDFIR 96
              R   RD A   +D   +DF R
Sbjct: 118 AEFRKLCRDYALKQVDKQREDFKR 141


>gi|120613181|ref|YP_972859.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166230603|sp|A1TVU7|SYL_ACIAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120591645|gb|ABM35085.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 897

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 10/182 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  KNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSRE--VATCDPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLKITDYAQELLDH 205

Query: 180 YE 181
            +
Sbjct: 206 VQ 207


>gi|293610316|ref|ZP_06692617.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827548|gb|EFF85912.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|288925917|ref|ZP_06419847.1| leucine--tRNA ligase [Prevotella buccae D17]
 gi|288337341|gb|EFC75697.1| leucine--tRNA ligase [Prevotella buccae D17]
          Length = 967

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + R+K Y+     YP+ A  H+GH    I +D+ ARF RL  L+VL   G D +G    +
Sbjct: 28  ESRKKFYVLNMFPYPSGAGLHVGHPLGYIASDIFARFKRLQSLNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +    +N   +R+  D +  S+D
Sbjct: 88  YAIQTGQHPEKTTTENINRYREQLDKIGFSFD 119


>gi|281492476|ref|YP_003354456.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376140|gb|ADA65631.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 932

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 37/277 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  D      +PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSW---NGVLNERDYLS---FPADLYLEGSDQYRGWFNSSITTSVAVNGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF+L  KG K+SKS+GN I P +V ++ G D LR + V  I    D     
Sbjct: 576 PY-KAVLSQGFVLDGKGRKMSKSIGNTILPKDVTKKFGADILRLW-VASIDAESD----- 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGA--FTE---SDESILSVCS 395
                RV+ D+ + +  +   +  ++  ++ +     P   A  F E    D+ +L   +
Sbjct: 629 ----VRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFN 684

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRAS--TVLY 449
            ++++IR    N         +I+ ++      Y D  K   +     +P+R S  TV+Y
Sbjct: 685 ELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           V   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 745 V---ILKDLVKILVPILPHTAEETWTYLEHEPENFAY 778



 Score = 44.7 bits (104), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R+  + G    +  G D HG  I +    AG+  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +  + D  +D    T    +      ++ K+++KG 
Sbjct: 118 LDYLEECRKYAMKQVDMQRSDFKSLGVLAD--WDRPYLTLLPEYEAAQIRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGAKPIYWSPSSESSLAEAEI 198


>gi|218263088|ref|ZP_03477326.1| hypothetical protein PRABACTJOHN_03007 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222962|gb|EEC95612.1| hypothetical protein PRABACTJOHN_03007 [Parabacteroides johnsonii
           DSM 18315]
          Length = 600

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 98  KVYPADFIAEGVDQTRGWFFTLHALATMVFDSVSY-KAVVSNGLVLDKNGNKMSKRLGNA 156

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 157 VDPFATIEQYGSDPLRWYMITNASPWDNIKFDIDGIEE 194


>gi|4038324|gb|AAC97364.1| methionyl-tRNA synthetase [Buchnera aphidicola]
          Length = 234

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+   +V F +  D HG  I   ++ 
Sbjct: 6  KKILVTCALPYANGPIHIGHMLEHIQADIWVRYQRMRNNEVWFISSDDAHGTAIMLKSEK 65

Query: 65 AGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRT 97
           G+T  K+       +  D ++  +IS+D++  T
Sbjct: 66 LGITPIKLIKKIKEEHIIDFSN-FNISHDNYHST 98


>gi|50086110|ref|YP_047620.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|60390694|sp|Q6F817|SYL_ACIAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49532086|emb|CAG69798.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 873

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSIDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|186684281|ref|YP_001867477.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689431|sp|B2J7T9|SYL_NOSP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|186466733|gb|ACC82534.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 871

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+ARF R+ G  V+   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARFKRMQGYRVIHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + GV    +  QN    R     L +S D
Sbjct: 92  DRGVPPAKWTYQNITQMRQQLQRLGLSID 120



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 85/179 (47%), Gaps = 22/179 (12%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +VI + G+D  R F++ +    KD  +D+  ++ +      N +  LV
Sbjct: 635 MSKSKGNGVAPEDVISKYGIDTARMFILFKAPPEKDLEWDEADVEGQFR--FLNRVWRLV 692

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +  ++  +             T++++ +       +Q + E+++++       Q  + +S
Sbjct: 693 TDYITAGVSRKKAQ----SDLTKAEKELRRAIHTAIQAVTEDVEDEY------QFNTAIS 742

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ +  +A        ++ D+ S +     E IR L IL+  F P +A++++ +L  +D
Sbjct: 743 ELMKLSNAL-------SDADKNSPIY---AEGIRTLVILIAPFAPHIADELWHLLGESD 791


>gi|325299389|ref|YP_004259306.1| leucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318942|gb|ADY36833.1| leucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 944

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKI 113
            A   G    +    N   +R+  D +  S+  D  +RT + +++   +  ++K+
Sbjct: 88  YAIQTGQHPAITTQNNINRYREQLDKIGFSFDWDREVRTCDPKYYHWTQWAFQKM 142



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 41/244 (16%)

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHG 294
           TN   + G  D  D +       D++++  D+L   A   W      A   L    +  G
Sbjct: 657 TNTFVSLGLKDQYDVTPLH---VDVNIVTNDVLDIEAFKNWRPEYHDAEFILEDGKYICG 713

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + +   EK+SKS+ NV++P  ++E+ G D LR + +      +   +D +G+        
Sbjct: 714 WAV---EKMSKSMYNVVNPDMIVEKYGADTLRMYEMFLGPVEQSKPWDTNGI-------- 762

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRA 413
            +G+   + +  ++        +PT    T+ + +SI  +  +V  +I     N  I   
Sbjct: 763 -DGVHRFLKKLWNLFYGRQGEFLPTESEATKEELKSIHKLIKKVTGDIEVFSYNTSISAF 821

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +  V  L +             LK  N             V+  L ILL  F P LA ++
Sbjct: 822 MICVNELTA-------------LKSRNK-----------AVLTDLVILLAPFAPHLAEEL 857

Query: 474 FDIL 477
           ++ L
Sbjct: 858 WEAL 861


>gi|306836711|ref|ZP_07469674.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567389|gb|EFM42991.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 1091

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 34/201 (16%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           DP  ++  W  +     +T G+ D  PD    KF+P ++ V   DIL F       F   
Sbjct: 647 DPD-VLDTWFSSALWPFSTLGWPDKTPD--LEKFYPTNVLVTAYDILFFWVARMMMFGTF 703

Query: 282 ANLPLP---------------KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           A    P               K ++ HG +   +G K+SKSLGN IDP++ + + G DAL
Sbjct: 704 AGTKTPELLGKGTDGRPQIPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADAL 763

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIPTPG- 381
           R+ L R    G D           + +D A    N  ++   +    L +  G+ P P  
Sbjct: 764 RFTLARGANPGVD---------LPLGSDAAAASRNFATKLFNATKFALMNGAGVAPLPSR 814

Query: 382 -AFTESDESILSVCSRVLQEI 401
              +++D  IL     V  ++
Sbjct: 815 TELSDADRWILDRAEEVRTQV 835


>gi|154151464|ref|YP_001405082.1| leucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000016|gb|ABS56439.1| leucyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 926

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 26/168 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           +REK YI+ A  YP+   H+GH    I  DV+ARF R+ G  VLF       G  +    
Sbjct: 27  DREKFYITVAFPYPSGAMHVGHGRTYIAPDVIARFWRMRGKQVLFPMAFHVTGAPVVGIS 86

Query: 60  -KAAQNAGVTTKVFVD-----QNS-RNFRDMADV----------------LDISYDDFIR 96
            + A+N   T  ++ D     QN    F D   +                L I +     
Sbjct: 87  KRIARNDPKTIHLYRDLYKVPQNVLAEFTDPLTIVKHFAAEYQRVMTSCGLSIDWRRRFI 146

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +  +       WK + + G + KG +   Y   DE    D ++ +G
Sbjct: 147 TVDPTYSKFVEWQWKHLYEAGHVMKGVHPVRYCTVDENPVGDHDLLEG 194


>gi|153002892|ref|YP_001377217.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152026465|gb|ABS24233.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 947

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 27/224 (12%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P DL++ G D  R  FH+    +    A+ P  + V +HGF+L  +G+ +SKSLGN + P
Sbjct: 589 PVDLYLEGSDQHRGWFHSSLLTSVATRAHAPY-RAVLTHGFVLDGQGKAMSKSLGNTVAP 647

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+I++ G D LR ++          + D   +   + + LA G    +  +V  +L   
Sbjct: 648 DEIIKKYGADILRLWV------SASDYRDDVRISSEIVSGLAEGYTK-IRNTVRYMLGAL 700

Query: 374 DGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD--- 425
           DG  P+  A         D   L+  +   ++++   +    H A    + L + VD   
Sbjct: 701 DGFDPSRDAVPLDELEPLDRWALAKLAAWDEKVKAAYEEYEFHLAYHATMQLCA-VDLSA 759

Query: 426 RYFDAQK----PWELKKTNPDR-ASTVLY-VTVEVIRQLAILLQ 463
            YFD  K     W+ K   P R A T L+ V  +V+R LA +L 
Sbjct: 760 LYFDIIKDRLYTWK-KDGKPRRSAQTALWLVCQDVLRLLAPVLS 802


>gi|327312865|ref|YP_004328302.1| leucine--tRNA ligase [Prevotella denticola F0289]
 gi|326945158|gb|AEA21043.1| leucine--tRNA ligase [Prevotella denticola F0289]
          Length = 973

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V   +N   +R+  D +  S+D
Sbjct: 90  IQTGQHPEVTTKKNIARYREQLDKIGFSFD 119



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 95/205 (46%), Gaps = 40/205 (19%)

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +A+ P P  V+  G+ +   EK+SKS+ NV++P +++E+ G D LR + +          
Sbjct: 732 TADRPTPAAVYKCGWAI---EKMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPVEASKP 788

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D +G+         +G    + +   +  ++ D   P       S ES+ SV  R++++
Sbjct: 789 WDTNGI---------DGCFRFLKKFWKLYQQELDDGEP-------SKESLKSV-HRLIKK 831

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +  +++    + A++  +  V+E+ +   A +                    E+++++ +
Sbjct: 832 VTGDIEQFSYNTAISAFMICVNELGQQKCASR--------------------ELLKKMIV 871

Query: 461 LLQAFVPKLANKIFDILFVADENRC 485
           L+  F P +A ++++ L    ++ C
Sbjct: 872 LIAPFAPHMAEELWEQLGGETKSVC 896


>gi|294787583|ref|ZP_06752836.1| leucine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484939|gb|EFG32574.1| leucine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 1002

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 8   YISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++ +   YP+ +  H+GH    I  DV+AR+HR+ G +VL T G D  G    + A   G
Sbjct: 74  FVMSMFPYPSGKGLHVGHPLGYISTDVMARYHRMKGENVLHTMGYDAFGLPAEQFAVQTG 133

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
              +V  +QN  N +     + +S+D
Sbjct: 134 QHPRVTTEQNIANMKRQLHRMGLSFD 159


>gi|260549055|ref|ZP_05823276.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407783|gb|EEX01255.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|238927290|ref|ZP_04659050.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884877|gb|EEQ48515.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 823

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 8/184 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y      YP+ + H+GH     I DV+ARF  ++G +VL   G D  G     AA 
Sbjct: 31  KPKYYALEMFPYPSGKLHMGHVRNYSIGDVIARFRTMEGYNVLHPMGFDSFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N       L ++Y  D  + T  + ++   + L++    KG  YK
Sbjct: 91  KNKVHPAEWTYANIANMEKQQRALGLAYDWDREVITCREDYYRWTQWLFELFYKKGLAYK 150

Query: 122 GCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              S  W         N+    +  DG+ +  + + V   +   +FF+++ Y D+LL+  
Sbjct: 151 KKASVNWCDTCGTVLANE----QVEDGKCWRCK-SEVHKKDLAQWFFKITDYADELLADL 205

Query: 181 ESHP 184
           +  P
Sbjct: 206 DKLP 209



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 45/248 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  K  +W P D ++ G +    H +Y   F        +L  + P    + + G ++  
Sbjct: 521 DRDKVNYWAPVDQYIGGIEHAILHLLYARFFTKVLRDAGMLDFDEPF-TNLLTQGMVIKD 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+ P E+I+  G D  R F++      +D  +   G++         G  
Sbjct: 580 GAKMSKSLGNVVSPEEIIDRYGADTARLFILFAAPVDRDLDWSDQGVE---------GAY 630

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILS--------VCSRVLQEIRENMQNQ-LI 410
             + R V  IL  +   I   GA    D + LS        V    ++++ E+++++ + 
Sbjct: 631 RFLGR-VWRILGQFAETI--KGAPASCDAASLSTEEAELRRVLHATIKKVTEDVRDRFMF 687

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A++ ++ LV+ +  + D       KK  P  A        E    L  +L  F P + 
Sbjct: 688 NTAISSIMELVNALYAFQD-------KKLTPGLAR-------ETASALLRMLAPFAPHIT 733

Query: 471 NKIFDILF 478
            +++  +F
Sbjct: 734 AELWAKIF 741


>gi|169797225|ref|YP_001715018.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156869|ref|YP_001845208.1| leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155981|ref|YP_002318026.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260556107|ref|ZP_05828326.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|294836312|ref|ZP_06780995.1| leucyl-tRNA synthetase [Acinetobacter sp. 6013113]
 gi|294840232|ref|ZP_06784915.1| leucyl-tRNA synthetase [Acinetobacter sp. 6014059]
 gi|294857748|ref|ZP_06795517.1| leucyl-tRNA synthetase [Acinetobacter sp. 6013150]
 gi|301346500|ref|ZP_07227241.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301509990|ref|ZP_07235227.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594195|ref|ZP_07239203.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226731222|sp|B7I5I5|SYL_ACIB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238688028|sp|B0V5H2|SYL_ACIBY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690966|sp|B2HTC4|SYL_ACIBC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169150152|emb|CAM88046.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208463|gb|ACC55861.1| Leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213055141|gb|ACJ40043.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260410162|gb|EEX03461.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322506763|gb|ADX02217.1| leuS [Acinetobacter baumannii 1656-2]
 gi|323516634|gb|ADX91015.1| leucyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|325859836|ref|ZP_08172966.1| leucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482762|gb|EGC85765.1| leucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 973

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +V   +N   +R+  D +  S+D
Sbjct: 88  YAIQTGQHPEVTTKKNIARYREQLDKIGFSFD 119



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 95/205 (46%), Gaps = 40/205 (19%)

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +A+ P P  V+  G+ +   EK+SKS+ NV++P +++E+ G D LR + +          
Sbjct: 732 TADRPTPAAVYKCGWAI---EKMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPVEASKP 788

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D +G+         +G    + +   +  ++ D   P       S ES+ SV  R++++
Sbjct: 789 WDTNGI---------DGCFRFLKKFWKLYQQELDDGEP-------SKESLKSV-HRLIKK 831

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +  +++    + A++  +  V+E+ +   A +                    E+++++ +
Sbjct: 832 VTGDIEQFSYNTAISAFMICVNELGQQKCASR--------------------ELLKKMIV 871

Query: 461 LLQAFVPKLANKIFDILFVADENRC 485
           L+  F P +A ++++ L    ++ C
Sbjct: 872 LIAPFAPHMAEELWEQLGGETKSVC 896


>gi|291559263|emb|CBL38063.1| leucyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 803

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 50/250 (20%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPK 288
           Y+DN +  +        K+ P D+++ G +    H +Y   +  FL    +     P   
Sbjct: 507 YIDNKNNEELVSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGVIDFDEPF-H 565

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K+F+ G I  K G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+ 
Sbjct: 566 KLFNQGMITGKNGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDESGI- 624

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                   +G+   ++R   +I+   D  +       E+D+ +L V  +++ +I   + N
Sbjct: 625 --------DGVHRFLTRFYKLIMDQKDKGV-------EADKELLKVRHKLIYDITTRLNN 669

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                +L  V+S   E      A      KK+  D+         E +    +LL  F P
Sbjct: 670 ----FSLNTVVSGFMEYTNTLTAM----AKKSGVDK---------ETLETAIVLLAPFAP 712

Query: 468 KLANKIFDIL 477
            +A ++++ +
Sbjct: 713 HIAEELWEAM 722



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKLLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +N +   + +   YD D  + TT+   +   + ++ K+  KG  
Sbjct: 89  AIKMGTHPRISTEANIKNIKRQINEISAIYDWDMEVNTTDPEFYKWTQWIFVKMFKKGLA 148

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E   N      GAD      + N  QWM       +++AY 
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGKCERCGAD----VTKKNLRQWM------LKITAYA 198

Query: 174 DKLLS 178
           D+LL+
Sbjct: 199 DRLLA 203


>gi|284052168|ref|ZP_06382378.1| leucyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291570532|dbj|BAI92804.1| leucyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 859

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + G+  + +  QN    R+    L  S D
Sbjct: 92  DRGIPPQTWTYQNIAQMREQLQRLGFSID 120


>gi|283768901|ref|ZP_06341811.1| isoleucine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104454|gb|EFC05828.1| isoleucine--tRNA ligase [Bulleidia extructa W1219]
          Length = 908

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 16/107 (14%)

Query: 227 IMYVWIDALT--NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           IM VW D+ +  N L   GY           +P DL+  G D  R  F++    +  +  
Sbjct: 523 IMDVWFDSGSSWNELIARGY----------DYPCDLYFEGSDQYRGWFNSSLIVSTAVHG 572

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             P  K+V SHG+++  KGEK+SKS+GNV++P+++I   G D  R +
Sbjct: 573 TAPY-KEVLSHGYVVDSKGEKMSKSVGNVVNPLDIIHVNGADVFRLW 618


>gi|227503056|ref|ZP_03933105.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49725]
 gi|227076117|gb|EEI14080.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49725]
          Length = 936

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 34/201 (16%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           DP  ++  W  +     +T G+ D  PD    KF+P ++ V   DIL F       F   
Sbjct: 492 DPD-VLDTWFSSALWPFSTLGWPDKTPD--LEKFYPTNVLVTAYDILFFWVARMMMFGTF 548

Query: 282 ANLPLP---------------KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           A    P               K ++ HG +   +G K+SKSLGN IDP++ + + G DAL
Sbjct: 549 AGTKTPELLGQGTDGRPQIPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADAL 608

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIPTP-- 380
           R+ L R    G D           + +D A    N  ++   +    L +  G+ P P  
Sbjct: 609 RFTLARGANPGVD---------LPLGSDAAAASRNFATKLFNATKFALMNGAGVAPLPKR 659

Query: 381 GAFTESDESILSVCSRVLQEI 401
              +++D  IL     V  ++
Sbjct: 660 TELSDADRWILDRAEEVRTQV 680


>gi|41408369|ref|NP_961205.1| valyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81413876|sp|Q73XN8|SYV_MYCPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41396725|gb|AAS04588.1| ValS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 882

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 32/181 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------------SANLPLPKKVFSHGF 295
           KF+P  + V G DIL     +W A ++                     +P    VF HG 
Sbjct: 477 KFYPTSVLVTGYDIL----FFWVARMMMFGTFVGDDDAITLDGRRGPQVPF-TDVFLHGL 531

Query: 296 IL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--A 352
           I    G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D ++   N   
Sbjct: 532 IRDESGRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAIGEDHVRASRNFCT 591

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            L N     +     +        +P     T++D  IL     V  E+     N    R
Sbjct: 592 KLFNATRYALLNGAQL------AELPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSR 645

Query: 413 A 413
           A
Sbjct: 646 A 646


>gi|330723356|gb|AEC45726.1| leucyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 788

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHK-GEKISK 305
           K+ P DL++ G++    H IY   W  FL    +   K    KV + G +L   G+K+SK
Sbjct: 508 KWMPVDLYIGGQEHAVGHLIYSRFWYKFLYDLKIVPTKEPFYKVVNQGMLLGTDGQKMSK 567

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN+I+P EV+ + G D+LR +L+          +  +G++         GI   V R 
Sbjct: 568 SKGNIINPNEVVNQFGADSLRIYLMFMSPLIDTKAWSVEGIQ---------GIKKWVDRI 618

Query: 366 VSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           V ++ K +         + E  S+    S+  + ++EI EN++    + A+++++  ++ 
Sbjct: 619 VRIMQKSF--------IYEENYSNAEFESIYHQSIKEIGENIEALKYNIAISKMMVYINH 670

Query: 424 V 424
           +
Sbjct: 671 L 671



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+A   HIGH       D++ARF RL+  DVL   G D  G    + A 
Sbjct: 29  QKFYVLDMFPYPSASGLHIGHPLGYTATDIIARFKRLNNFDVLHPIGWDAFGLPAEQYAL 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           +       F  +N +NF+     L  SYD
Sbjct: 89  STKNHPAKFTQENIQNFKKQLISLGFSYD 117


>gi|328772617|gb|EGF82655.1| hypothetical protein BATDEDRAFT_34367 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1048

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVID 312
           ++P  L   G DIL F         L  N  +P K+VF H  I    G K+SKSLGNVID
Sbjct: 596 YFPNTLLETGWDILFFWVARMVMMSLKFNGVVPFKQVFCHAMIRDAHGRKMSKSLGNVID 655

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           PI+VIE V +  L+  L +     ++    +DG KK    D  NGI
Sbjct: 656 PIDVIEGVTLQLLQERLEKGNLDPRELVRARDGQKK----DFPNGI 697


>gi|315606936|ref|ZP_07881942.1| leucine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251317|gb|EFU31300.1| leucine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 981

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + R+K Y+     YP+ A  H+GH    I +D+ ARF RL  L+VL   G D +G    +
Sbjct: 42  ESRKKFYVLNMFPYPSGAGLHVGHPLGYIASDIFARFKRLQSLNVLNPMGYDAYGLPAEQ 101

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +    +N   +R+  D +  S+D
Sbjct: 102 YAIQTGQHPEKTTTENINRYREQLDKIGFSFD 133


>gi|241206933|ref|YP_002978029.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860823|gb|ACS58490.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 876

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIGSMKAQLKAMGLSLD 121



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       A+    
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPERDVIWSEAGVEG------AHRFTQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R +S        + P P A  E+   I     + L+ +  +      ++A+A++  L
Sbjct: 685 RLWRLISEAADALSAVAPAPAADGEA-LPISQAAHKTLKAVENDYDKLWFNKAVARIYEL 743

Query: 421 VS 422
           V+
Sbjct: 744 VN 745


>gi|291059838|gb|ADD72573.1| isoleucine--tRNA ligase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 1184

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 33/254 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           +++PA  H I + + +    ++   +L+  L   P  +     G +L   G+K+SK+L N
Sbjct: 668 RYFPA--HFISEGLDQTRGWFYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRN 725

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRS 365
             DP EV++  G DALR FLVR      D   Y  +G+K   K V   L N      S S
Sbjct: 726 YADPNEVMDRYGADALRLFLVRSAVVRADDLKYSDEGVKDILKTVIIPLWN------SYS 779

Query: 366 VSMILKDYDGMIPTPGAFTES----------------DESILSVCSRVLQEIRENMQNQL 409
             +   + DG+ P   A  +                 D  ILS+  +++Q+I   +    
Sbjct: 780 FYVTYANIDGIDPPVCAKVDGMGQAVTRLATHLNNPLDRWILSLTEKLVQDIACALDAYD 839

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPK 468
           + +    ++S V +++ ++  +      K+  D      Y T+  V+++  + +   VP 
Sbjct: 840 VSKVADPIVSYVDQLNNWYIRRSRRRFWKSINDEDKRCAYNTLYCVLKRCVLAIAPVVPF 899

Query: 469 LANKIFDILFVADE 482
           +   I+  +  AD+
Sbjct: 900 ITESIWQNIRAADD 913


>gi|167767420|ref|ZP_02439473.1| hypothetical protein CLOSS21_01939 [Clostridium sp. SS2/1]
 gi|167711395|gb|EDS21974.1| hypothetical protein CLOSS21_01939 [Clostridium sp. SS2/1]
          Length = 803

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 50/250 (20%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPK 288
           Y+DN +  +        K+ P D+++ G +    H +Y   +  FL    +     P   
Sbjct: 507 YIDNKNNEELVSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGVIDFDEPF-H 565

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K+F+ G I  K G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+ 
Sbjct: 566 KLFNQGMITGKNGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDESGI- 624

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                   +G+   ++R   +I+   D  +       E+D+ +L V  +++ +I   + N
Sbjct: 625 --------DGVHRFLTRFYKLIMDQKDKGV-------EADKELLKVRHKLIYDITTRLNN 669

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                +L  V+S   E      A      KK+  D+         E +    +LL  F P
Sbjct: 670 ----FSLNTVVSGFMEYTNTLTAM----AKKSGVDK---------ETLETAIVLLAPFAP 712

Query: 468 KLANKIFDIL 477
            +A ++++ +
Sbjct: 713 HIAEELWEAM 722



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKLLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +N +   + +   YD D  + TT+   +   + ++ K+  KG  
Sbjct: 89  AIKMGTHPRISTEANIKNIKRQINEISAIYDWDMEVNTTDPEFYKWTQWIFVKMFKKGLA 148

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E   N      G D      + N  QWM       +++AY 
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGKCERCGTD----VTKKNLRQWM------LKITAYA 198

Query: 174 DKLLS 178
           D+LL+
Sbjct: 199 DRLLA 203


>gi|108757222|ref|YP_628632.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461102|gb|ABF86287.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 966

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 36/261 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +             K +  PADL + G D  R  FH+    A       
Sbjct: 571 ILDVWFDSACMFSAVL--------EKRQRIPADLFLEGSDQHRGWFHSSMLVAVGTRDMS 622

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K   +HGF++  +GEK+SKS GNV+ P +VI++ G + LR ++          + + 
Sbjct: 623 PY-KACLTHGFVVDGQGEKMSKSRGNVVAPDKVIQQYGAEVLRLWV------AASDYRND 675

Query: 344 DGLKKRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCS 395
             L  ++   L+ G   I N V  ++S  L D+D   P   A  E      D   L   +
Sbjct: 676 VRLSDQILKGLSEGYRKIRNTVRYALSN-LYDFD---PAKHAVPEVELLPLDRWALGRLA 731

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK----PWELKKTNPDRASTVLY 449
            V+  +R+  ++   H   A V+  V+      YFD  K     W         A TVLY
Sbjct: 732 EVVARVRKAYEDYEFHLVYATVVDFVAGDLSAVYFDILKDRLYTWRADGQPRRGAQTVLY 791

Query: 450 VTVEVIRQLAILLQAFVPKLA 470
               V+ +L   + +F  + A
Sbjct: 792 EVASVLLRLLAPVMSFTAEEA 812



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +     Y N   H GHA   ++ D++ ++  + G    F  G D HG  I +A + 
Sbjct: 56  EPFVLPDGPPYANGHLHAGHALNKVLKDIVVKYRNMSGRRCDFIPGWDTHGLPIEQAVEK 115


>gi|54294236|ref|YP_126651.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|60390669|sp|Q5WWZ8|SYL_LEGPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53754068|emb|CAH15541.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 823

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +YK
Sbjct: 92  KNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F ++++Y D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITSYADELLSSLD 207

Query: 182 SHPEF 186
           S  E+
Sbjct: 208 SLDEW 212



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 RAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGNV+DP  +I   G D  R F++
Sbjct: 576 MSKSLGNVVDPNHLINTYGADTARLFVM 603


>gi|325124515|gb|ADY84038.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|288928849|ref|ZP_06422695.1| leucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329833|gb|EFC68418.1| leucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 959

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL+G +VL   G D +G    + A
Sbjct: 30  KKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLEGYNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISD 115
              G    V  + N   +R+  D +  S+D    +RT +  ++   +  ++K+ D
Sbjct: 90  IQTGQHPAVTTETNIARYREQLDRIGFSFDWSREVRTCDPTYYKWTQWAFQKMFD 144


>gi|291615302|ref|YP_003525459.1| leucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585414|gb|ADE13072.1| leucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 868

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y  +   YP+ + H+GH     I DVL R+H++ G  VL   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLTRWHKMRGYSVLQPMGWDAFGLPAENAAI 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           QN     K   D  +   + +  + L I +   I T +  ++   + L+ ++ +KG  YK
Sbjct: 92  QNKVPPAKWTYDNIAYMKKQLQSLGLGIDWTREIATCQPDYYKWNQWLFLRMLEKGIAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +      V+  E  GY+F ++ Y ++LL+  +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGRGWRT-GALVEKREIPGYYFGITQYAEELLADLD 207

Query: 182 SHPEF 186
             P +
Sbjct: 208 KLPGW 212


>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 921

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|209966833|ref|YP_002299748.1| isoleucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960299|gb|ACJ00936.1| isoleucyl-tRNA synthetase IleS [Rhodospirillum centenum SW]
          Length = 962

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    +       P  + V +HGF L   GEK+SKS GN + P
Sbjct: 579 PADLYLEGSDQHRGWFHSSLLESCGTRGRAPY-EAVLTHGFTLDQNGEKMSKSKGNTVAP 637

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV---NADLANGIGNLVSRSVSMIL 370
            +VI+E G D LR ++V         F +   +  ++    ADL   + N + R +   L
Sbjct: 638 QDVIKEFGADILRLWVV------STDFTEDQRIGPKILQAQADLYRRLRNTL-RYLLGAL 690

Query: 371 KDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR--- 426
            D+      P A   E +  +L   + +   +R+++ +  +HR LA  +     VD    
Sbjct: 691 ADWTEAERLPAAEMPELERWVLHRLAEMDGAVRQSIADYDLHR-LATELHNFCAVDLSAF 749

Query: 427 YFDAQK 432
           YFD +K
Sbjct: 750 YFDVRK 755



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           KER    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG  I
Sbjct: 56  KERPLYVLHDGPPYANGNIHIGHALNKILKDVVNRSQQMLGRNAPYVPGWDCHGLPI 112


>gi|29840422|ref|NP_829528.1| isoleucyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539548|sp|Q822L8|SYI_CHLCV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29834771|gb|AAP05406.1| isoleucyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 1043

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 22/263 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +N   ++A F PAD    G D  R    ++   ++S+ L
Sbjct: 514 YVFDCWFDSGAMPYAQNHYPFENQKETEAGF-PADFIAEGLDQTR--GWFYTLTVISSAL 570

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
                 K    +G +L + G K+SK L N   P+ ++   G DALR +L+  +    +  
Sbjct: 571 FDQTAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMGIMNTYGADALRLYLLDSVVVKAEDL 630

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K++   L N + +       +   D D        ++E D  ILS    
Sbjct: 631 RFSDKGVESILKQILLPLTN-VLSFFKTYTDLYGFDADNYDKEEITYSEIDRWILSNLYT 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDR--ASTVLYVT 451
           V+ ++RE+M +  ++ A+   ++ + ++  ++     ++ WE + T PDR  A   LY  
Sbjct: 690 VVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESEDT-PDRRAAFATLY-- 746

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+     ++  F+P ++  I+
Sbjct: 747 -EVLTVFCRVIAPFIPFISEDIY 768


>gi|299771580|ref|YP_003733606.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701668|gb|ADI92233.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 874

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|258647300|ref|ZP_05734769.1| leucine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852817|gb|EEX72686.1| leucine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 945

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++ K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  KDKPKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G    V  ++N   +R+  D +  S+D
Sbjct: 88  YAIQTGQHPAVTTERNIARYREQLDRIGFSFD 119



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 13/176 (7%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  D+L   A   W     +A   L    +  G+ +   EK+SKS+ NV++P +++
Sbjct: 678 DVNIVANDVLDVEAFKAWRPEYSTAEFILEDGKYICGWAV---EKMSKSMFNVVNPDDIV 734

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           ++ G D LR + +      +   +D +G+         +G    + R  ++  +  D  +
Sbjct: 735 DKYGADTLRLYEMFLGPINQSKPWDSNGV---------DGCARFLRRFWNLFFEGEDLRV 785

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
               A  E+ +S+  +  +V  +I E   N  I   +  V  L+ +  R  +  +P
Sbjct: 786 TDEKATKENLKSLHKLLKKVTTDIEEFAYNTSIPAFMIAVNELMQQKCRCREVLEP 841


>gi|238916624|ref|YP_002930141.1| leucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871984|gb|ACR71694.1| leucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 816

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 30/184 (16%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFIL-HKGEKIS 304
           K+W P D +  G +    H +Y   W  FL    + P P   +K  SHG IL   GEK+S
Sbjct: 540 KYWLPVDWYNGGMEHTTLHLLYSRFWHRFLYDQKVVPCPEPYQKRTSHGMILGENGEKMS 599

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +++ + G D LR + +   A      + +DG+K         G    + R
Sbjct: 600 KSRGNVVNPDDIVRDYGADTLRTYEMFIGAFDAAASWSEDGVK---------GCRRFLDR 650

Query: 365 SVSM--ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
              +  I+ D +G       F++  E+ +    + ++++  + +N   + A+AQ++++++
Sbjct: 651 VWKLQDIMTDEEG-------FSKEFETKM---HQTIKKVSFDYENLKYNTAIAQLMTMLN 700

Query: 423 EVDR 426
           +  +
Sbjct: 701 DFSK 704



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      A
Sbjct: 43  KPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENYA 102

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K+    N  +F++    +  S+  D  I TT+  ++   + ++ K+   G  Y
Sbjct: 103 IKNKIHPKIVTKNNIDHFKEQLQSIGYSFDWDREINTTDPDYYKWTQWIFLKLFKAGLAY 162

Query: 121 K 121
           K
Sbjct: 163 K 163


>gi|167626615|ref|YP_001677115.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082324|sp|B0TZQ5|SYI_FRAP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167596616|gb|ABZ86614.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 935

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K+  +PADL++ G D  R  F      A     N P  
Sbjct: 531 VWFDSGSSSMCIL------DIDKSLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGNQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  +    D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIVKSKTLSGYDAPYIPTWDCHGLPI 102


>gi|116254456|ref|YP_770294.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384448|sp|Q1MA25|SYL2_RHIL3 RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|115259104|emb|CAK10215.1| putative leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 876

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIGSMKAQLKAMGLSLD 121



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 16/146 (10%)

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           AFLL+ N     +  S G I    EK+SKS  NV+DP ++I   G D  R+F++ +    
Sbjct: 616 AFLLTNN-----EEVSIGSI----EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPE 666

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  + + G++       A+     + R +S        + P P    E+  SI     +
Sbjct: 667 RDVIWSEAGVEG------AHRFTQRLWRLISEAADALSAVAPAPATDGEA-LSISQAAHK 719

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS 422
            L+ ++ +      ++A+A++  LV+
Sbjct: 720 TLKAVQNDYDKLWFNKAVARIYELVN 745


>gi|91092762|ref|XP_973584.1| PREDICTED: similar to isoleucyl tRNA synthetase [Tribolium
           castaneum]
 gi|270014792|gb|EFA11240.1| hypothetical protein TcasGA2_TC010772 [Tribolium castaneum]
          Length = 1207

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 12/234 (5%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
           ++PAD    G D  R  F+ +   +  L    P  K + ++G +L   G+K+SK   N  
Sbjct: 555 YFPADFIAEGIDQTRGWFYTLLVISTALFGKAPY-KNLIANGLVLASDGQKMSKRKKNYP 613

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRSVS 367
           DP+E++ + G DALR +L+       +   + ++G++   K V     N    L+    S
Sbjct: 614 DPLEIVSKYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAFRFLLQNIES 673

Query: 368 MILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +  +      T  +       D+ ILS    +L+ +R+ MQ   ++  + ++   +  +
Sbjct: 674 FVQDNNQAFYYTENSVAPENIMDKWILSFTQSLLEYVRKEMQLYHLYNVIPRLTKFIDYL 733

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++       LK     D   T L    EV+  +  ++  F P LA  ++  L
Sbjct: 734 TNWYVRMNRKRLKGEGGFDDCKTALLTLFEVLLNIVKMMAPFSPFLAETMYQYL 787


>gi|167038345|ref|YP_001665923.1| leucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116746|ref|YP_004186905.1| leucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166857179|gb|ABY95587.1| leucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319929837|gb|ADV80522.1| leucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 816

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K              ++R
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIK-------------AIAR 624

Query: 365 SVSMILKDYDGMIPT---PGAFTE---SDESILS-VCSRVLQEIRENMQNQLIHRALAQV 417
            V+ + +  D  I T   PG   +    DE  L+ V    ++ + E+ +    + A+A++
Sbjct: 625 FVNRVERFIDKFIETRNNPGKIKDDMGKDEKELNYVRHYAIKGVTEDAERFQFNTAIARI 684

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ + +Y              D     +    EV+  L  LL  F P  + ++++ L
Sbjct: 685 MELVNALYKY------------EADVEVKNIKFYEEVVADLIKLLAPFAPHFSEEMWEKL 732



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGWEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  ++M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLKEMGATFDWDYE 122


>gi|241668533|ref|ZP_04756111.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877068|ref|ZP_05249778.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843089|gb|EET21503.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 813

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     A
Sbjct: 29  KNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A     +   +   N    R   D L  S+D
Sbjct: 89  AIKHKKSPYEWTKSNIAYMRSQLDSLGFSFD 119



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVTSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN +DP E+I++ G D +R F
Sbjct: 576 MSKSKGNTVDPQELIDKYGADTVRLF 601


>gi|217418703|ref|ZP_03450210.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
 gi|217398007|gb|EEC38022.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
          Length = 737

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 45  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 104

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 105 EAGCAPERLARECS 118



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R
Sbjct: 524 LLALGMVKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRR 582

Query: 350 VNADLAN--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRE 403
             A +A      + V+ + + I   +D   P     P A     +  L+   R    I  
Sbjct: 583 QRAFVARLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALQRRMQDWLATGGR---RIAA 639

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L 
Sbjct: 640 DFRRHDYHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLG 693

Query: 464 AFVPKLANKIF 474
            F P +A +++
Sbjct: 694 PFAPHVAEELW 704


>gi|229587045|ref|YP_002845546.1| valyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259516949|sp|C3PLG3|SYV_RICAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|228022095|gb|ACP53803.1| Valyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 812

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 40/283 (14%)

Query: 223 DPQY-IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--W 275
           +P Y +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y   
Sbjct: 450 EPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTIL 509

Query: 276 PAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A L    LP  K +  +G+ L +   K+SKS GNV+ P +++E+ G D +RY+      
Sbjct: 510 KAHLHQNTLPW-KNIMVNGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-K 567

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  Y +D +K      L N + N    +   +   +D +        +   S+L + 
Sbjct: 568 LGADTTYSEDVMKN--GKRLVNKLWN----AAKFVFIHFDKL-----KGEDKKASLLDIK 616

Query: 395 SRVLQEIRENMQNQLIHRA-----------------LAQVISLVSEVDRYFDAQK--PWE 435
            ++  E  + M N+L+                    L +    V   D Y +  K   ++
Sbjct: 617 EKITNEFDKWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVLCDNYLEISKTRSYD 676

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 677 EEHKNPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 35 KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|146421716|ref|XP_001486802.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146387923|gb|EDK36081.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 590

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 2/97 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  +   YP+   H+GH     I+DV+AR+ RL G +V+   G D  G     AA  
Sbjct: 89  EKFYCCSMFPYPSGALHMGHLRVYTISDVVARYMRLKGKNVIHPMGWDAFGLPAENAAIE 148

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTE 99
            G+   ++   N    +   D++  D  +D  + T +
Sbjct: 149 NGIDPAIWTRDNINKMKAQMDLMLADFDWDREVSTCD 185


>gi|27262522|gb|AAN87542.1| Leucyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 775

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 18/183 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+ARF  ++G +VL   G D  G     AA
Sbjct: 40  DKPKYYCLEMFPYPSGNLHMGHVRVYSIGDVIARFKTMEGFNVLHPMGWDAFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  N R     + ISY  D  + T    ++   + L+ ++   G  Y
Sbjct: 100 IKHNVPPSDWTWSNIANMRRQLQTMGISYDWDREVATCHPDYYKWTQWLFLQLYKAGLAY 159

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           K       C S    L +E     D + +  D Q    +    QW      FFR++ Y  
Sbjct: 160 KKKAHVNWCPSCATVLANEQVV--DGLCERCDSQV--EKKALAQW------FFRITDYAQ 209

Query: 175 KLL 177
           +LL
Sbjct: 210 RLL 212



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 41/210 (19%), Positives = 95/210 (45%), Gaps = 24/210 (11%)

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           ++S   P  + + + G +L  G K+SKS GN + P E+I + G D  R F++      +D
Sbjct: 573 IVSVEEPF-ENLLTQGMVLMGGSKMSKSKGNTVSPEEIIAKYGADTARLFILFAAPPERD 631

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM------IPTPGAFTESDESILS 392
             +   G++       A+   + V R V      +D +       P     +  D  ++ 
Sbjct: 632 LEWSDRGVEG------AHRFLHRVWRLVQTYGDQFDNVPNLIIDSPDLQGLSGDDRELVR 685

Query: 393 VCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +    ++++ E++  +   + A++ ++ +V+ + +Y D        K + D+ +  L + 
Sbjct: 686 ISHYSVKKVGEDIGQRFNFNTAVSTIMEMVNALYQYKD--------KVSLDQQN--LPLV 735

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + + +L ++L  F P +  +++  L  +D
Sbjct: 736 KDALARLVLILAPFAPHICEELWQELGGSD 765


>gi|306830852|ref|ZP_07464014.1| isoleucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426875|gb|EFM29985.1| isoleucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 932

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +G +   +PA+L++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNAREGLE---YPANLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEIPL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I    +      R+    ++DKG 
Sbjct: 118 TEYLEMCREYALSQVDKQREDFKRLGVSADWE-NPYITLIPEYEAAQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|304373030|ref|YP_003856239.1| Leucyl-trna synthetase protein [Mycoplasma hyorhinis HUB-1]
 gi|304309221|gb|ADM21701.1| Leucyl-trna synthetase protein [Mycoplasma hyorhinis HUB-1]
          Length = 788

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHK-GEKISK 305
           K+ P DL++ G++    H IY   W  FL    +   K    KV + G +L   G+K+SK
Sbjct: 508 KWMPVDLYIGGQEHAVGHLIYSRFWYKFLYDLKIVPTKEPFYKVVNQGMLLGTDGQKMSK 567

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN+I+P EV+ + G D+LR +L+          +  +G++         GI   V R 
Sbjct: 568 SKGNIINPNEVVNQFGADSLRIYLMFMSPLIDTKAWSVEGIQ---------GIKKWVDRI 618

Query: 366 VSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           V ++ K +         + E  S+    S+  + ++EI EN++    + A+++++  ++ 
Sbjct: 619 VRIMQKSF--------IYEENYSNAEFESIYHQSIKEIGENIEALKYNIAISKMMVYINH 670

Query: 424 V 424
           +
Sbjct: 671 L 671



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+A   HIGH       D++ARF RL+  DVL   G D  G    + A 
Sbjct: 29  QKFYVLDMFPYPSASGLHIGHPLGYTATDIIARFKRLNNFDVLHPIGWDAFGLPAEQYAL 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           +       F  +N +NF+     L  SYD
Sbjct: 89  STKNHPAKFTQENIQNFKKQLISLGFSYD 117


>gi|262280963|ref|ZP_06058746.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257863|gb|EEY76598.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 874

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 38/240 (15%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG--FI 296
           L  T Y +  +G K  F PAD+ +   +  R         +LSA      K    G   +
Sbjct: 586 LADTFYREAENGKKTWFNPADIELERDEKGR---------ILSA------KYSGDGQEVV 630

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           +   EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN
Sbjct: 631 IGGQEKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------AN 684

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQ-LIHRAL 414
                V R V+  L+  +       A    D + +       +Q++ ++++ +   + A+
Sbjct: 685 RFLKRVWRLVAGFLEKGNSTSTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAI 744

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++  +++       E K  N       + V  E I  L ILL+ F P L+  + 
Sbjct: 745 AALMELLNASNKF-------EAKDDND------IAVEREAITTLLILLEPFAPHLSQTLL 791


>gi|229823227|ref|ZP_04449296.1| hypothetical protein GCWU000282_00525 [Catonella morbi ATCC 51271]
 gi|229787393|gb|EEP23507.1| hypothetical protein GCWU000282_00525 [Catonella morbi ATCC 51271]
          Length = 808

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y      YP+ Q  H+GH       D +AR  R  G DVL   G D  G    + A +
Sbjct: 38  KFYALDMFPYPSGQGLHVGHPEGYTATDAVARMKRAQGYDVLHPMGWDAFGLPAEQYALD 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G     F   N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  Y+ 
Sbjct: 98  TGNDPADFTAANIETFRRQINSLGFSYDWEREVNTTDPNYYKWTQWIFSKMYEKGLAYEA 157

Query: 123 CYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             +  W         N++ +    DG+     H PV     + +  +++AY ++
Sbjct: 158 EVAVNWCPALGTVLANEEVI----DGKSERGGH-PVYRKPMKQWMLKITAYAER 206



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL 297
           L +PD   AK+ P DL++ G +    H +Y   W  FL    +   K    K+F+ G IL
Sbjct: 516 LADPD-KLAKWLPVDLYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFMKLFNQGMIL 574

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
              G K+SKS GNV++P  V+++ G D LR +
Sbjct: 575 GTDGNKMSKSKGNVVNPDHVVDQYGADTLRVY 606


>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 921

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|255070255|ref|XP_002507209.1| predicted protein [Micromonas sp. RCC299]
 gi|226522484|gb|ACO68467.1| predicted protein [Micromonas sp. RCC299]
          Length = 766

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 51/238 (21%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           DG   K+W P DL+V G +    H +Y   W   L     +S   P  +++ S G IL  
Sbjct: 484 DGDLEKYWMPVDLYVGGAEHAVLHLLYARFWHKVLYDIGAVSTKEPF-QRLVSQGMIL-- 540

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GE +SKS GNV++P E++ + G D+LR + +      +   +   G++         G  
Sbjct: 541 GE-MSKSRGNVVNPDEIVRDFGADSLRLYEMFMGPLRETKVWQTKGVE---------GCS 590

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R+  +     D         T SD+  L V  R + ++ E  +N   + A+A ++ 
Sbjct: 591 RFLARAYRLFDSYTDE--------TPSDDQ-LRVIHRCIAKVTEETENMRFNTAIAAMME 641

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  + +A   WE +                ++   A+LL  + P L+ ++++ L
Sbjct: 642 -------FTNAATKWERRPK-------------VILESFALLLGPYAPHLSEELWERL 679



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 15  YPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+ A  H+GH       D++AR+ R+ G +VL   G D  G    + A   G   +   
Sbjct: 4   YPSGAGLHVGHPEGYTATDIIARYKRMTGHNVLHPMGWDAFGLPAEQYAIETGTHPRHTT 63

Query: 74  DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + N   FR+    L  SYD    + T++ +++   + ++ ++ ++G  Y+ 
Sbjct: 64  NTNVGRFREQLKSLGFSYDWEREVATSDSKYYKWTQWIFLQLLERGLAYQA 114


>gi|163857636|ref|YP_001631934.1| leucyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|189082984|sp|A9HWW6|SYL_BORPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163261364|emb|CAP43666.1| leuS [Bordetella petrii]
          Length = 885

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA
Sbjct: 37  EKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             + V    +   N     +  + M   +D S +  +   +  ++   + L+ K+ +KG 
Sbjct: 97  IKSKVPPAKWTYDNIAYMKKQMQAMGLAIDWSRE--MCACDPEYYKWNQWLFLKMLEKGI 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V    DG+ + +    V+  E  GY+ R++ Y D+LL 
Sbjct: 155 AYRKTQVVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYLRITDYADELLD 210

Query: 179 YYES 182
              S
Sbjct: 211 QVRS 214


>gi|87201227|ref|YP_498484.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|123749671|sp|Q2G3C3|SYL_NOVAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|87136908|gb|ABD27650.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 848

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+ + HIGH     + DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 41  KPRSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKRMRGFEVLHPMGWDAFGMPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N  N +     L  + D    I T E  ++   + L+  +   G +Y+
Sbjct: 101 EKGVHPGGWTRDNIANMKAQLKRLGFALDWSREIATCEPEYYGQEQALFLDLYAAGLVYR 160



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 34/173 (19%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E++ + G DA+R+F++ +    +D  + + G++         G    
Sbjct: 625 KMSKSKKNVVDPDEIVAKYGADAIRWFMLSDSPPERDLPWSEAGIE---------GCARF 675

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R +  +   YD       A T  D+++     + +  +  +++    ++A+A++  L 
Sbjct: 676 VQR-LWRLFGQYD------AAATGEDKALDRKAHQTVHAVASDIEALGFNKAVARIYELT 728

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+            K  P  + +      + IR+L +L+   +P LA + +
Sbjct: 729 GAVE------------KAAPSASRS------DAIRKLLLLVAPMMPHLAEEAY 763


>gi|325193359|emb|CCA27697.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 1019

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 16/111 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P DL   G DIL F    W A +      L+  LP  K V+ H  +  K G K+SKSL
Sbjct: 571 FYPTDLMETGYDILFF----WVARMVFMGQKLTGKLPF-KTVYLHSMVRDKYGRKMSKSL 625

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           GNV+DP+E+I    + A    L +++  G     + +  KK    D  NGI
Sbjct: 626 GNVVDPLEIISGCTLSA----LFKKLESGNLPIKEIEKAKKGQKLDFPNGI 672



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           H+GHA  + I D L R+HR+ G   L+  GTD  G
Sbjct: 107 HLGHALTVAIQDALTRWHRMKGHATLWVPGTDHAG 141


>gi|209523609|ref|ZP_03272163.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496014|gb|EDZ96315.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 859

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + G+  + +  QN    R+    L  S D
Sbjct: 92  DRGIPPQTWTYQNIAQMREQLQRLGFSID 120


>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 921

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|148238671|ref|YP_001224058.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147847210|emb|CAK22761.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 968

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++   +         ++  +PADL++ G D  R  F +    +  ++ + P
Sbjct: 555 MDVWFDSGSSWAAVSSQ------RESLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             K+V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR ++
Sbjct: 609 Y-KRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPAYGADVLRLWV 661


>gi|119719481|ref|YP_919976.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524601|gb|ABL77973.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 977

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +++    Y N+ PH+G AY ++  D+LARF R+ G +VLF  G    G  I  AA
Sbjct: 49  RPKFFVTFPYPYINSFPHLGTAYTVLRVDILARFKRMQGFNVLFPQGWHATGGPIVAAA 107



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 41/232 (17%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS--ANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           ++P D+ V GKD++  H ++   F++   A  P    P+ +  +G++L  G+K+SKS GN
Sbjct: 609 WYPVDMRVSGKDLIGNHLVF---FIMHHVAIFPEEHWPRGIGVNGWVLVAGKKMSKSAGN 665

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            I   E +E  G DA R+    E   G  G  D             N    + S++V ++
Sbjct: 666 FILLREALEYWGADATRF---AEAYAGNSGLDD------------GNFEPEVASKAVDLL 710

Query: 370 LKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + Y+  +   G   E+    D+   SV  R L+++ +  +       L         V+
Sbjct: 711 YEWYEFAVNNYGKGDENRRFVDDWFESVLYRTLEKVTKEYEELNTKNVL---------VE 761

Query: 426 RYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +F+ Q    W +K+        VL   VE+     ++L    P +A +I++
Sbjct: 762 GFFNLQNAYRWYVKRRGGTANKEVLKKFVEI---QTLILAPITPHIAEEIWE 810


>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824207|sp|Q636D1|SYI1_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 921

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|237710459|ref|ZP_04540940.1| isoleucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229455181|gb|EEO60902.1| isoleucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 1162

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D+LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEQYGSDSLRWYMITNSSPWDNLKFDTDGV 754


>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 913

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 514 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 567

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 568 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 612



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|189424047|ref|YP_001951224.1| isoleucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420306|gb|ACD94704.1| isoleucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 924

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 20/141 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++        NP  S     PADL++ G D  R  FH+    +       
Sbjct: 530 ILDVWFDSGVSHAAVLE--PNPKLSS----PADLYLEGSDQHRGWFHSSLLESVGTRGVA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF+L  +G K+SKS+GNV+ P +VI++ G D LR +      C    + D 
Sbjct: 584 PY-KSVLTHGFVLDGQGRKMSKSMGNVVAPEDVIKKFGADVLRLW------CSAQDYRDD 636

Query: 344 DGLKKRVNADLANGIGNLVSR 364
           +    R++ ++ N +     R
Sbjct: 637 N----RISEEILNRVAEAYRR 653



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 19/125 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---------------- 58
           Y N   HIGHA    + D++ +  R++G    +  G D HG  I                
Sbjct: 58  YANGHTHIGHALNKTLKDIVLKVKRMEGFQAPYVPGWDCHGLPIELQVEKNLGSKKHQMT 117

Query: 59  -AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            A+  +   V  K F+D     F+ +  + D  +D+   T    +         K +  G
Sbjct: 118 KAEMRKECRVYAKKFIDIQKEEFKRLGVLGD--WDNPYMTMTNEYEGLTAAELAKFAHNG 175

Query: 118 DIYKG 122
            +Y+G
Sbjct: 176 GLYRG 180


>gi|167839404|ref|ZP_02466088.1| putative leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 728

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 19/241 (7%)

Query: 246 DNP-DGSKAKFW-PADLHVIGKDILR---FHAIYWPAFLLS---ANLPLP-KKVFSHGFI 296
           D+P D   A  W P DL + G D +R   FH       L     A++  P   + + G +
Sbjct: 460 DDPFDREDANAWLPVDLMIGGADQVRTCFFHVRMIARALRRMGIADVEEPVTTLLALGMV 519

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS GN +    ++E  G DALR  ++   A   D  +  D L +R  A LA 
Sbjct: 520 KQDDRKMSKSAGNAVSLRSIVERYGADALRLAIIGAAAPENDVNWSDD-LVRRQRAFLAR 578

Query: 357 ---GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               +  +V     +      G  P  G        +    +   + I ++ +    H A
Sbjct: 579 LWAFVHRVVETEAGVAAAHDAGDPPATGRPDPLHRRMRDWLATGGRRIADDFRRHDYHLA 638

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L  +  L   + + FDA     ++K  P RA   L +  +  RQL + L  F P +A  +
Sbjct: 639 LKNLAFLFERL-QAFDA----AMRKREPPRAED-LAILADATRQLVLYLGPFAPHVAEAL 692

Query: 474 F 474
           +
Sbjct: 693 W 693


>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|330953013|gb|EGH53273.1| leucyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 868

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY+
Sbjct: 92  DNNVAPAKWTYENIDYMKTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+F+++AY ++LL 
Sbjct: 152 KNGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITAYANELLE 204

Query: 179 YYESHP 184
             +  P
Sbjct: 205 SLDELP 210


>gi|302560699|ref|ZP_07313041.1| leucyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302478317|gb|EFL41410.1| leucyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 960

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 59  RPKKFIMDMFPYPSGAGLHVGHPLGYIATDVFARFQRMTGHNVLHTLGFDAFGLPAEQYA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N R     L + +D
Sbjct: 119 VQTGTHPRVSTESNMENMRSQLRRLGLGHD 148


>gi|300901153|ref|ZP_07119258.1| leucyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|331662007|ref|ZP_08362930.1| leucine--tRNA ligase [Escherichia coli TA143]
 gi|300355392|gb|EFJ71262.1| leucyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|331060429|gb|EGI32393.1| leucine--tRNA ligase [Escherichia coli TA143]
          Length = 907

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  K  +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKDLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 251


>gi|241895883|ref|ZP_04783179.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870926|gb|EER74677.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 804

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++EK +      +P+ Q  H+GH       D+++R  R+ G +VL   G D  G    
Sbjct: 27  VSDKEKFFAMDMFPFPSGQGLHVGHPEGYTATDIVSRMKRMQGYNVLHPMGFDAFGLPTE 86

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
           + A   G   K    +N + FR     L +SYD    + TT+ +++   + +++++  KG
Sbjct: 87  EYAIKTGEDPKTVTAKNVKTFRHQMKSLGLSYDWSREVNTTDPKYYKWTQWIFEQLYKKG 146

Query: 118 DIYK 121
             Y+
Sbjct: 147 LAYE 150



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 19/174 (10%)

Query: 259 DLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLGNV 310
           DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK+SKS GNV
Sbjct: 526 DLYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQRLANQGMILGENHEKMSKSKGNV 585

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+EE G D LR + +      +   + ++GL          G    + R   + +
Sbjct: 586 VNPDDVVEEYGADTLRLYEMFMGPLDQSIAWSEEGLA---------GSRRWLERVWRLFI 636

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            D D +       T +D  +  + +  ++++ E+ +N   + A++Q++  V+E 
Sbjct: 637 DDDDKL--RDHITTINDHKLDKIYNETVKKVTEDYENLRFNTAISQMMIFVNEA 688


>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604270|ref|YP_002868131.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583658|sp|Q81WE4|SYI1_BACAN RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782360|sp|C3P665|SYI_BACAA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782361|sp|C3L730|SYI_BACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|304437277|ref|ZP_07397237.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369769|gb|EFM23434.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 823

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 8/184 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y      YP+ + H+GH     I DV+ARF  ++G +VL   G D  G     AA 
Sbjct: 31  KPKYYALEMFPYPSGKLHMGHVRNYSIGDVIARFRTMEGYNVLHPMGFDSFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N       L ++Y  D  + T  + ++   + L++    KG  YK
Sbjct: 91  KNKVHPAEWTYANIANMEKQQRALGLAYDWDREVITCREDYYRWTQWLFELFYKKGLAYK 150

Query: 122 GCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              S  W         N+    +  DG+ +  +   V   +   +FF+++ Y D+LL+  
Sbjct: 151 KKASVNWCDTCGTVLANE----QVEDGKCWRCKSE-VNKKDLAQWFFKITDYADELLADL 205

Query: 181 ESHP 184
           +  P
Sbjct: 206 DKLP 209



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 33/242 (13%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  K  +W P D ++ G +    H +Y   F        +L  + P    + + G ++  
Sbjct: 521 DRGKVNYWAPVDQYIGGIEHAILHLLYARFFTKVLRDAGMLDFDEPF-TNLLTQGMVIKD 579

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANG 357
           G K+SKSLGNV+ P E+I+  G D  R F++      +D  +   G++   R    +   
Sbjct: 580 GAKMSKSLGNVVSPEEIIDRYGADTARLFILFAAPVDRDLDWSDQGVEGAYRFLGRVWRI 639

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQ 416
           +G   + ++      YD         +  +  +  V    ++++ E+++++ + + A++ 
Sbjct: 640 LGQF-AETIKGAPASYDA-----ATLSTEETELRRVLHATIKKVTEDVRDRFMFNTAISS 693

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ LV+ +  + D       K+  P  A        E    L  +L  F P +  +++  
Sbjct: 694 IMELVNALYAFQD-------KELTPGLAR-------ETASALVRMLAPFAPHITAELWAQ 739

Query: 477 LF 478
           LF
Sbjct: 740 LF 741


>gi|296435535|gb|ADH17709.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|297139894|gb|ADH96652.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 1041

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|259046843|ref|ZP_05737244.1| leucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036466|gb|EEW37721.1| leucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 818

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      YP+ Q  H+GH       D ++R  R  G +VL   G D  G    + A
Sbjct: 44  KKNFYALDMFPYPSGQGLHVGHPEGYTATDAVSRMKRAQGYNVLHPMGWDAFGLPAEQYA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F   N  NF+   + L  SY  D  I TT+  ++   + ++ K+ + G  Y
Sbjct: 104 LDTGNDPAEFTKVNVANFKRQINELGFSYDWDREINTTDPEYYKWTQWIFTKLVEMGLAY 163

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N++ +    DG+     H PV     + +  +++AY D+LL
Sbjct: 164 EAEIPVNWCPALGTVLANEEVI----DGKSERGGH-PVYRKPMKQWMLKITAYADRLL 216



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +  N    +K+F+ G IL +G
Sbjct: 528 DPEKVKQWLPVDLYIGGAEHAVLHLLYARFWYKVLYDLGVVPNKEPFQKLFNQGMILGEG 587

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P +V+ E G D LR +
Sbjct: 588 NEKMSKSKGNVVNPDDVVREYGADTLRVY 616


>gi|237508333|ref|ZP_04521048.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
 gi|235000538|gb|EEP49962.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
          Length = 734

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R
Sbjct: 521 LLALGMVKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRR 579

Query: 350 VNADLAN--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRE 403
             A +A      + V+ + + I   +D   P     P A     +  L+   R    I  
Sbjct: 580 QRAFVARLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALQRRMQDWLATGGR---RIAA 636

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L 
Sbjct: 637 DFRRHDYHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLG 690

Query: 464 AFVPKLANKIF 474
            F P +A +++
Sbjct: 691 PFAPHVAEELW 701


>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|254782364|sp|C1EPQ9|SYI_BACC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|126700232|ref|YP_001089129.1| isoleucyl-tRNA synthetase [Clostridium difficile 630]
 gi|254976207|ref|ZP_05272679.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093594|ref|ZP_05323072.1| isoleucyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255101782|ref|ZP_05330759.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307650|ref|ZP_05351821.1| isoleucyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255315342|ref|ZP_05356925.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518007|ref|ZP_05385683.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651123|ref|ZP_05398025.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684189|ref|YP_003215474.1| isoleucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687848|ref|YP_003218982.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520975|ref|ZP_07407322.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115251669|emb|CAJ69504.1| Isoleucyl-tRNA synthetase [Clostridium difficile]
 gi|260210352|emb|CBA64706.1| isoleucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213865|emb|CBE05876.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 1035

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 125/269 (46%), Gaps = 25/269 (9%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  +    P  K V     +L K G+K+SKS GN 
Sbjct: 542 QLFPADYISEGIDQTRGWFYSLLAVSTFVLGKAPY-KSVLVPDLVLDKDGKKMSKSRGNT 600

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P+E+ ++ G DALR++L+          +D DGLK+ + +     + N+   +   + 
Sbjct: 601 VNPMELFDQYGADALRWYLLYVSPPWTPTKFDMDGLKE-IQSKFIGTMKNVY--NFFTLY 657

Query: 371 KDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EV 424
            + D + PT          E D  ILS  + +++++ EN+    +++ L  +   ++ ++
Sbjct: 658 ANTDDINPTEFFVEYKDRPELDRWILSKFNNLMKDVEENLAIFELNKTLRMIQDFINDDL 717

Query: 425 DRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL---- 477
             ++     ++ W  + T   +A  V   T E++  L   +  F P ++ +++  L    
Sbjct: 718 SNWYIRRSRRRFWATELTEDKKA--VYNTTYELLHGLCRAIAPFAPYMSEEMYRNLTGEV 775

Query: 478 --FVADENRCFQSL-DQRLKPGFMLHKTF 503
              +A+  +C + L D +L+    L K  
Sbjct: 776 SVHLAEYPKCNEELVDTKLEEKMDLAKNL 804


>gi|134279208|ref|ZP_01765921.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|254193176|ref|ZP_04899611.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|134249627|gb|EBA49708.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|169649930|gb|EDS82623.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 734

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R
Sbjct: 521 LLALGMVKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRR 579

Query: 350 VNADLAN--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRE 403
             A +A      + V+ + + I   +D   P     P A     +  L+   R    I  
Sbjct: 580 QRAFVARLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALHRRMQDWLATGGR---RIAA 636

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L 
Sbjct: 637 DFRRHDYHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLG 690

Query: 464 AFVPKLANKIF 474
            F P +A +++
Sbjct: 691 PFAPHVAEELW 701


>gi|34581330|ref|ZP_00142810.1| valyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262715|gb|EAA26219.1| valyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 812

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 38/282 (13%)

Query: 223 DPQY-IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--W 275
           +P Y +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y   
Sbjct: 450 EPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTIL 509

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       
Sbjct: 510 KAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KL 568

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  Y +D +K      L N + N    +   +   +D +        +   S+L +  
Sbjct: 569 GADTAYSEDVMKN--GKRLVNKLWN----AAKFVFIHFDKL-----KGEDKKASLLDIKE 617

Query: 396 RVLQEIRENMQNQLIHRA-----------------LAQVISLVSEVDRYFDAQK--PWEL 436
           ++  E  + M N+L+                    L +    V   D Y +  K   ++ 
Sbjct: 618 KITNEFDKWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVLCDNYLEISKTRSYDE 677

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 678 EHKNPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 35 KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|296437395|gb|ADH19556.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/11074]
          Length = 1041

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 913

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 514 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 567

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 568 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 612



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|258405548|ref|YP_003198290.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797775|gb|ACV68712.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 831

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 12/197 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     I DV+ARF R+ G +V    G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRVYTIGDVIARFKRMRGYNVFHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    R     L  S  +   + T    ++   ++ + K+ +KG IY
Sbjct: 90  IKHGTHPAKWTYANITEMRQQLQRLGYSLEWQRELATCHPGYYKWEQLFFLKLYEKGLIY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W    +    N+    +  +G  +      V+  E   +F R++AY D+LL  
Sbjct: 150 RKKAPVNWCPGCNTVLANE----QVEEGMCWRCDSE-VEHKELAQWFVRITAYADELLQD 204

Query: 180 YE----SHPEFILPIER 192
            +    + PE ++ ++R
Sbjct: 205 LDKLDGTWPERVITMQR 221



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 19/146 (13%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +L  G K+SKS GN++DP E++E  G D  R F +      +D  ++   ++
Sbjct: 569 QHLLTQGMVLKDGAKMSKSKGNIVDPNEMLETYGADTTRLFTLFAAPPERDLDWNDKAVE 628

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--------PGAFTESDESILSVCSRVLQ 399
                    G    ++R   M  +D  G +PT         G  +E+  ++       +Q
Sbjct: 629 ---------GAYRFLARLWRM-GQDLSGTLPTLPACAPLPAGELSETAAALRRKEHLTVQ 678

Query: 400 EIRENMQNQL-IHRALAQVISLVSEV 424
           ++  +M+ +   + A+A V+ LV+E+
Sbjct: 679 KVSADMEEKFQFNTAIAAVMELVNEI 704


>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 923

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 524 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 578 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 622



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 60  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 116

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 117 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 174

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 175 KGYIYKGQKPVYWSPTSESALAEAEI 200


>gi|32265964|ref|NP_859996.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|48428532|sp|Q7VIY7|SYL_HELHP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|32262013|gb|AAP77062.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 830

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 12/195 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI +   YP+   H+GH     I D LAR +R +G +VL   G D  G     AA  
Sbjct: 39  KKKYILSMFPYPSGAIHMGHVRNYCIGDALARNYRQNGYNVLHPMGWDAFGMPAENAAIK 98

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY-K 121
                K +   N    R     L +S+  +    T++  +    +  + K+ ++G IY K
Sbjct: 99  HKTHPKTWTYSNIDTMRKELATLGLSFSKEREFATSDAIYTRFEQEFFIKMWERGLIYRK 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
             Y  W   +D+    +++V +G   +       PV   +   Y+ +++ Y D+L   L+
Sbjct: 159 EAYLNWCP-KDKTILANEQVIEGKCWRC----DTPVVQKQMFQYYIKITDYADELLECLN 213

Query: 179 YYESH-PEFILPIER 192
             E H P  +L ++R
Sbjct: 214 KLEGHWPSQVLSMQR 228



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN+++P E+I   G D  R F++
Sbjct: 584 LLTQGMVLKDGAKMSKSKGNIVNPNELIAHYGADTARLFVL 624


>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 913

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 514 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 567

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 568 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 612



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|81395073|sp|Q6HER9|SYI1_BACHK RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|16329894|ref|NP_440622.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501028|sp|P73274|SYL_SYNY3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1652380|dbj|BAA17302.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 869

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 38/87 (43%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA   
Sbjct: 34  KFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYQVLHPMGWDAFGLPAENAAIER 93

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           G+  K + ++N    R     L +S D
Sbjct: 94  GIPPKQWTEKNIAQMRAQLQQLGLSID 120


>gi|282877273|ref|ZP_06286105.1| leucine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300614|gb|EFA92951.1| leucine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 950

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y+     YP+ A  H+GH    I +D+ AR+ R +G +VL   G D +G    + 
Sbjct: 29  QKKKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRQNGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G    +  ++N +++R+  D +  S+D
Sbjct: 89  AIQTGQHPSITTEENIKHYREQLDKIGFSFD 119


>gi|258649099|ref|ZP_05736568.1| isoleucine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850745|gb|EEX70614.1| isoleucine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 1137

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
            + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN
Sbjct: 637 GRCFPADFIAEGVDQTRGWFFTLHAIATMIFDSVSF-KNVISNGLVLDKNGNKMSKRLGN 695

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +DP E I + G D LR++++   +   +  +D++G+K+
Sbjct: 696 AVDPFETIAKYGSDPLRWYMITNASPWDNLKFDEEGIKE 734


>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 913

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 514 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 567

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 568 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 612



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|255656594|ref|ZP_05402003.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449952|ref|ZP_06891716.1| isoleucine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878334|ref|ZP_06902342.1| isoleucine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261222|gb|EFH08053.1| isoleucine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430632|gb|EFH16471.1| isoleucine--tRNA ligase [Clostridium difficile NAP07]
          Length = 1035

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 125/269 (46%), Gaps = 25/269 (9%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  +    P  K V     +L K G+K+SKS GN 
Sbjct: 542 QLFPADYISEGIDQTRGWFYSLLAVSTFVLGKAPY-KSVLVPDLVLDKDGKKMSKSRGNT 600

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P+E+ ++ G DALR++L+          +D DGLK+ + +     + N+   +   + 
Sbjct: 601 VNPMELFDQYGADALRWYLLYVSPPWTPTKFDMDGLKE-IQSKFIGTMKNVY--NFFTLY 657

Query: 371 KDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EV 424
            + D + PT          E D  ILS  + +++++ EN+    +++ L  +   ++ ++
Sbjct: 658 ANTDDINPTEFFVEYKDRPELDRWILSKFNNLMKDVEENLAIFELNKTLRMIQDFINDDL 717

Query: 425 DRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL---- 477
             ++     ++ W  + T   +A  V   T E++  L   +  F P ++ +++  L    
Sbjct: 718 SNWYIRRSRRRFWATELTEDKKA--VYNTTYELLHGLCRAIAPFAPYMSEEMYRNLTGEV 775

Query: 478 --FVADENRCFQSL-DQRLKPGFMLHKTF 503
              +A+  +C + L D +L+    L K  
Sbjct: 776 SVHLAEYPKCNEELVDTKLEEKMDLAKNL 804


>gi|254431958|ref|ZP_05045661.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626411|gb|EDY38970.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 880

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA   GV    + D
Sbjct: 46  YPSGNLHMGHVRNYVITDVIARVQRMRGRPVLHPMGWDAFGLPAENAAIERGVDPGDWTD 105

Query: 75  QNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           +N    R     L +S  +D  + T    ++   + L+ +  + G  Y+   +  +   D
Sbjct: 106 RNIAAMRQQLQRLGLSIDWDREVATCHADYYRWTQWLFLQFLEAGLAYQKDATVNWDPVD 165

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +    +++V   ++G+ + +    V+  +   +F +++AY D+LL
Sbjct: 166 QTVLANEQV--DSEGRSWRSGAL-VEKRQLRQWFLKITAYADQLL 207



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 23/181 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGI 358
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++   R    L   +
Sbjct: 622 EKMSKSKHNGVDPAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLWRLV 681

Query: 359 GNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
              ++R + +   + DG     +PT      ++  +       +  + E++      + A
Sbjct: 682 DGALARGLMLGPAEQDGTDSANLPT-ADLIPAERELRRAVHTAIAAVSEDLDGDFQFNTA 740

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +++++ L + +  + +A +       +P        V  E +R L +LL  F P LA ++
Sbjct: 741 VSELMKLSNAMADHLEASR-------DP--------VAREALRTLVLLLAPFAPHLAEEL 785

Query: 474 F 474
           +
Sbjct: 786 W 786


>gi|134095829|ref|YP_001100904.1| leucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166231614|sp|A4G8E6|SYL_HERAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|133739732|emb|CAL62783.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Herminiimonas arsenicoxydans]
          Length = 881

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 12/180 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA    
Sbjct: 41  FYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANN 100

Query: 67  VTTKVFVDQNSRNFR-DMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           V    +   N  + +  MA + L I +   +   +  ++   + ++ K+ +KG IYK   
Sbjct: 101 VPPAQWTYANIEHMKTQMASMGLAIDWSREMTACKPEYYKWNQWMFLKMLEKGIIYKKTG 160

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           S  +   D+    +++V  G     G     +  P+       Y+ R++ Y ++LL + E
Sbjct: 161 SVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYARITDYAEELLDHVE 213


>gi|311745324|ref|ZP_07719109.1| isoleucine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577859|gb|EAZ82079.1| isoleucine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 1135

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 11/200 (5%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+         Y  +N D  KA + PAD    G D  R  F  ++  A +L  ++  
Sbjct: 608 VWFDSGAMPYAQWHYPFENEDIFKANY-PADYIAEGVDQTRGWFFTLHTIAVMLFDSIAF 666

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V ++G +L K G K+SK LGN +DP + I+E G DA+R++++       +  ++ +G
Sbjct: 667 -KNVIANGLVLDKNGNKMSKRLGNAVDPFKTIKEYGPDAVRWYMLSNANPWDNLKFNLEG 725

Query: 346 ---LKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
              +++R    L N      +  ++   + D   ++P      E D+ I+S    ++ E+
Sbjct: 726 VAEVQRRFFGTLQNTYNFFALYANLDEFVYDKSKVVPV-SERAELDQWIVSKLQSLIVEV 784

Query: 402 RENMQNQLIHRALAQVISLV 421
            E M N    +A   ++   
Sbjct: 785 EEAMDNYDATKATRAIMGFT 804



 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTT-----K 70
           N  P I H     + D+  R+  L G  V    G D HG  +  +  +  G+T      K
Sbjct: 63  NGTPGIHHVMARTLKDIFCRYKTLQGYQVKRKGGWDTHGLPVELQVEKELGITKEDIGKK 122

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIR-------------TTEKRHHDTCRILWKKISDKG 117
           + V++ ++  R+        +DD                T +  + +T   L K++ +KG
Sbjct: 123 ISVEEYNKKCRETVMRFKNEWDDLTEKIGYWVDLDDPYITFDSNYIETLWSLLKRLYEKG 182

Query: 118 DIYKG 122
            +YKG
Sbjct: 183 LLYKG 187


>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409428|sp|Q732H4|SYI1_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|254994884|ref|ZP_05277074.1| leucyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
          Length = 824

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA +  
Sbjct: 28  CYVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYR 87

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
           V   V+ ++N  + R     + ISY+
Sbjct: 88  VNPAVWTERNIESMRKQLKSIGISYN 113


>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 913

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 514 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 567

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 568 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 612



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|221195813|ref|ZP_03568866.1| leucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184287|gb|EEE16681.1| leucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 859

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           R K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 47  RPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGYDVLHPMGFDAFGLPAENAAI 106

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                  V T   +DQ  +    M    D   D    T +  ++   + ++ K+ +KG +
Sbjct: 107 KHNTQPSVWTHKNIDQAVKTMFRMGFAYD--KDRMFNTCDPEYYKWGQWIFLKMYEKGLV 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +   D+    +++V    +G+ +     P +  E   ++ R++ Y  +LL
Sbjct: 165 YRATSPVNWCPNDKTVLANEQV---VNGRCWRCGAVPEK-RELSQWYLRITDYAQELL 218


>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782366|sp|B7HLM9|SYI_BACC7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782367|sp|B9IVX2|SYI_BACCQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|160933116|ref|ZP_02080505.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
 gi|156868190|gb|EDO61562.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
          Length = 931

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 35/159 (22%)

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++YE + E ILP            +G K       +FD         + IM VW D+ + 
Sbjct: 505 AWYELNTEDILP------------AGTKCKKCGASSFD-------KEKDIMDVWFDSGST 545

Query: 238 Y---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFS 292
           +   L+   YL        KF PADL++ G D  R  F +    +       P  K V +
Sbjct: 546 HAAVLSKRPYL--------KF-PADLYLEGADQYRGWFQSSLLTSVATKGTAPY-KAVVT 595

Query: 293 HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HG+++  +G K+SKSLGN I+P E++++ G D LR ++ 
Sbjct: 596 HGWVVDGEGRKMSKSLGNGIEPQEIVDQYGADILRLWVA 634


>gi|121596203|ref|YP_988099.1| leucyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166230604|sp|A1WCP8|SYL_ACISJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120608283|gb|ABM44023.1| leucyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 910

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     A
Sbjct: 30  QAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV    +   N     +  + M   +D S +  I T +  ++   + L+ K+ DKG
Sbjct: 90  ALKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSRE--IATCDPDYYKWNQWLFLKMLDKG 147

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL
Sbjct: 148 IAYRKTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLKITDYAQELL 203

Query: 178 SYYE 181
            + +
Sbjct: 204 DHVQ 207


>gi|83594296|ref|YP_428048.1| isoleucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83577210|gb|ABC23761.1| Isoleucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 940

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +      L+  D  K   WPADL++ G D  R  FH     +       
Sbjct: 540 IVEVWFDSGSTHAFV---LEARDDLK---WPADLYLEGSDQHRGWFHTSLLESCGTRGRA 593

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    V +HGF+L  KG+K+SKS GN   P +V+  VG D +R ++V
Sbjct: 594 PY-DAVLTHGFLLDEKGDKLSKSKGNAESPQKVVSSVGADIMRLWVV 639



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K RE+  +     Y N   H GHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 47  KGREQFVLHDGPPYANGHLHNGHALNKILKDVITRSQQMLGKDANYVPGWDCHGLPI 103


>gi|56708082|ref|YP_169978.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670553|ref|YP_667110.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370567|ref|ZP_04986572.1| leucine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|60390664|sp|Q5NG64|SYL_FRATT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123359478|sp|Q14HL6|SYL_FRAT1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56604574|emb|CAG45623.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320886|emb|CAL09006.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568810|gb|EDN34464.1| leucine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|282159282|gb|ADA78673.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 813

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREITTCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|326407355|gb|ADZ64426.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 932

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 37/277 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  D      +PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSW---NGVLNERDYLS---FPADLYLEGSDQYRGWFNSSITTSVAVNGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF+L  KG K+SKS+GN I P +V ++ G D LR + V  I    D     
Sbjct: 576 PY-KAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLW-VASIDTESD----- 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGA--FTE---SDESILSVCS 395
                RV+ D+ + +  +   +  ++  ++ +     P   A  F E    D+ +L   +
Sbjct: 629 ----VRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFN 684

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRAS--TVLY 449
            ++++IR    N         +I+ ++      Y D  K   +     +P+R S  TV+Y
Sbjct: 685 ELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           V   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 745 V---ILKDLVKILVPILPHTAEETWTYLEHEPENFAY 778



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R+  + G    +  G D HG  I +    AG+  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +  + D  +D    T    +      ++ K+++KG 
Sbjct: 118 LDYLEECRKYAMKQVDMQRSDFKSLGVLAD--WDRPYLTLLPEYEAAQIRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGQKPIYWSPSSESSLAEAEI 198


>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|15892976|ref|NP_360690.1| valyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|81527972|sp|Q92GR9|SYV_RICCN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15620172|gb|AAL03591.1| valyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 812

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 38/282 (13%)

Query: 223 DPQY-IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--W 275
           +P Y +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y   
Sbjct: 450 EPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTIL 509

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       
Sbjct: 510 KAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KL 568

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  Y +D +K      L N + N    +   +   +D +        +   S+L +  
Sbjct: 569 GADTAYSEDVMKN--GKRLVNKLWN----AAKFVFIHFDKL-----KGEDKKASLLDIKE 617

Query: 396 RVLQEIRENMQNQLIHRA-----------------LAQVISLVSEVDRYFDAQK--PWEL 436
           ++  E  + M N+L+                    L +    V   D Y +  K   ++ 
Sbjct: 618 KITNEFDKWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVLCDNYLEISKTRSYDE 677

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 678 EHKNPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 35 KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 922

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++ +     D+         PADL++ G D  R  F++    +  ++   
Sbjct: 523 IMDVWFDSGSSHQSVLEERDDLQR------PADLYLEGSDQYRGWFNSSLTTSVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + SHGF L  +G K+SKSLGNV+ P +V+ ++G D LR ++ 
Sbjct: 577 PY-KGILSHGFALDGEGRKMSKSLGNVVLPSKVMNQLGADILRLWVA 622



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 21/158 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I  A
Sbjct: 45  KDRPMYVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMSGYHAPYVPGWDTHGLPIETA 104

Query: 62  -AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHD 104
             +N  V  K   + +  +FR +      D +D   + F+R            T K  ++
Sbjct: 105 LTKNKKVKRK---EMSVADFRKLCEEYAYDQVDRQREQFMRLGVRGDWFNPYITLKPEYE 161

Query: 105 TCRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             +I ++ +++  G IYKG    ++S   E+   + E+
Sbjct: 162 AQQIKVFGEMAKNGLIYKGLKPVYWSPSSESALAEAEI 199


>gi|225021674|ref|ZP_03710866.1| hypothetical protein CORMATOL_01702 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945665|gb|EEG26874.1| hypothetical protein CORMATOL_01702 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 882

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 93/233 (39%), Gaps = 46/233 (19%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 408 MHDWTISRQLW-WGHRIPIWYGPDGEVVCLGPDDEVPEGYTQDPD-VLDTWFSSALWPFS 465

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK------------ 288
           T G+ +       KF+P  + V   DIL F       F   A L  P+            
Sbjct: 466 TMGWPEKTP-ELEKFYPTSVLVTAYDILFFWVARMMMFGTFAGLTTPEILGSGRDGRPQI 524

Query: 289 ---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               +F HG +  + G K+SKSLGN IDP++ + E G DALR+ L R    G D     D
Sbjct: 525 PFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVAEYGADALRFTLARGSNPGVDLPLGAD 584

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             +   N   A  + N  +   +++   +   IP     T++D+ IL    +V
Sbjct: 585 AAQSSRN--FATKLFN--ATRFALMNGAHVAGIPDVADLTDADKWILGRLEQV 633


>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|254782362|sp|B7JJY2|SYI_BACC0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTAVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 576 PY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 620



 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|83943971|ref|ZP_00956428.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845218|gb|EAP83098.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 971

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 11/128 (8%)

Query: 210 SRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           +++ F  GI  PDD      I+ VW D+ + +       D  DGS+     AD+++ G D
Sbjct: 558 AKERFLGGIVNPDDYTQVFDILDVWFDSGSTHAFV--LRDREDGSEDGI--ADVYMEGTD 613

Query: 267 ILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
             R  FH+    +   +   P  + V +HGF L  KG K+SKS+GN I P +V+++ G D
Sbjct: 614 QHRGWFHSSLLQSVGTTGRAPY-RNVVTHGFTLDEKGMKMSKSIGNTIVPEKVVQQYGAD 672

Query: 324 ALRYFLVR 331
            LR ++ +
Sbjct: 673 ILRLWVAQ 680



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGNLHIGHALNKTIKDMIVRSHQMMGFDARYIPGWDCHGLPI 108


>gi|32033773|ref|ZP_00134058.1| COG0060: Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247020|ref|ZP_07529074.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306856472|gb|EFM88621.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 922

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 511 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 559

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 560 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 619

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 620 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 670 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 705


>gi|328955636|ref|YP_004372969.1| leucyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455960|gb|AEB07154.1| leucyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 860

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 8/184 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 41  RPKRYVLEMFPYPSGDLHMGHVRNYTIGDAMARAARMRGFDVLHPIGFDAFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +  +N          +  SY  D   +T    ++   + +++K+ ++G +Y 
Sbjct: 101 KHRTQAAAWTYRNMECALATMRRMGFSYDMDRLQQTCSPEYYRWGQWIFEKLWERGLVYR 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W         N+  V    +G+ +     P +  + E ++FR++ Y D+LL+  
Sbjct: 161 KKSPVNWCPGCKTVLANEQVV----NGRCWRCDSLPER-RDLEQWYFRITEYADELLADL 215

Query: 181 ESHP 184
           +  P
Sbjct: 216 DKLP 219



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK-G 300
            + +++ P D +V G +    H +Y   F        LL  + P  + + + G +  + G
Sbjct: 553 AAASRWMPVDNYVGGIEHAILHLLYSRFFTKALRDIGLLDIDEPF-ENLLTQGMVKDEHG 611

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           E +SKS+GNVI P  VIE  G D LR  ++      KD  +D + ++
Sbjct: 612 EVMSKSVGNVIAPATVIEPYGADTLRLAILFIAPSEKDFSWDANAVE 658


>gi|229543463|ref|ZP_04432523.1| leucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229327883|gb|EEN93558.1| leucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 804

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 11/197 (5%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+ A  H+GH       D+++R  R+ G +VL   G D  G    +
Sbjct: 28  ENKPKFYCLDMFPYPSGAGLHVGHPEGYTATDIVSRTKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF  QN   FR     +  SY  D  I T++  ++   + ++ ++  KG 
Sbjct: 88  YAIDTGNDPAVFTIQNINTFRRQMKSIGFSYDWDREINTSDPEYYKWTQWIFLQLWKKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y       W         N++ +    DG+     H PV       +  +++AY D+LL
Sbjct: 148 AYIDEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVIRKPMRQWMLKITAYADRLL 202

Query: 178 SYYES--HPEFILPIER 192
              E    PE I  ++R
Sbjct: 203 EDLEELDWPENIKDMQR 219



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W  FL     +S   P  +++F+ G IL  
Sbjct: 514 DPEKLKKWLPVDLYIGGTEHAVLHLLYARFWHKFLYDIGVVSTKEPF-QRLFNQGMILGA 572

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNV++P +++E  G D LR +
Sbjct: 573 NHEKMSKSRGNVVNPDDILESHGADTLRLY 602


>gi|218703976|ref|YP_002411495.1| leucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403904|ref|ZP_06647898.1| leuS [Escherichia coli FVEC1412]
 gi|298379680|ref|ZP_06989285.1| leucyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|226695259|sp|B7N9P8|SYL_ECOLU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218431073|emb|CAR11949.1| leucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|291428490|gb|EFF01515.1| leuS [Escherichia coli FVEC1412]
 gi|298279378|gb|EFI20886.1| leucyl-tRNA synthetase [Escherichia coli FVEC1302]
          Length = 860

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  K  +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKDLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|134301894|ref|YP_001121863.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166231609|sp|A4IXU1|SYL_FRATW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134049671|gb|ABO46742.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 813

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|161830613|ref|YP_001596489.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082996|sp|A9NC49|SYL_COXBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161762480|gb|ABX78122.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 820

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y 
Sbjct: 92  QRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KNAIVNWDPVDQTVLANEQIV----DGRGWRS-GAVVERREISQWFLKITDYSEELLKDL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE ++ ++R
Sbjct: 207 DELKEWPEQVITMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y            LL++N P   ++ + G +L  G K
Sbjct: 518 RAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPF-IRLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNV+ P  +I++ G D +R F++
Sbjct: 577 MSKSKGNVVTPQSLIKKYGADTVRLFII 604


>gi|70726164|ref|YP_253078.1| leucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762321|sp|Q4L7A3|SYL_STAHJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68446888|dbj|BAE04472.1| leucyl-rRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 804

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 30/158 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG-------------- 339
            EK+SKS GNV++P ++++  G D LR +      L   IA  ++G              
Sbjct: 574 NEKMSKSKGNVVNPDDIVDSHGADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRL 633

Query: 340 FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           F ++DG L  ++  +  NG+  + +++V  + +D++ +
Sbjct: 634 FINEDGSLSNKIVENNDNGLDKVYNQTVKKVTEDFNTL 671


>gi|18976662|ref|NP_578019.1| valyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|74537331|sp|Q8U409|SYV_PYRFU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18892235|gb|AAL80414.1| valyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 891

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 23/266 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  +AK W     P  L   G DI+R  A Y  +  +
Sbjct: 453 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 MLTGEKPWNDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTAL-APPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D  ILS   R++
Sbjct: 572 HPFKWEIVD--YNFRFLQKLWN-IYRFAERHIKDFDYEKYKHIELEPLDRWILSRLHRII 628

Query: 399 QEIRENMQN---QLIHRALAQVISLVSEV-DRYFD--AQKPWELKKTNPDRASTVLYVTV 452
           +   E ++     LI R L   I    EV D Y +    + +   + +  +A   LY   
Sbjct: 629 KFATEELEKYRFNLITRELMTFIW--HEVADDYIEMIKHRLYGEDEESKLKAKVALY--- 683

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E++  + +LL  FVP +  +++  +F
Sbjct: 684 ELLYNIMLLLAPFVPHITEELYHHIF 709



 Score = 40.4 bits (93), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG
Sbjct: 38 IDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHG 84


>gi|83954544|ref|ZP_00963255.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83840828|gb|EAP79999.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 971

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 11/128 (8%)

Query: 210 SRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           +++ F  GI  PDD      I+ VW D+ + +       D  DGS+     AD+++ G D
Sbjct: 558 AKERFLGGIVNPDDYTQVFDILDVWFDSGSTHAFV--LRDREDGSEDGI--ADVYMEGTD 613

Query: 267 ILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
             R  FH+    +   +   P  + V +HGF L  KG K+SKS+GN I P +V+++ G D
Sbjct: 614 QHRGWFHSSLLQSVGTTGRAPY-RNVVTHGFTLDEKGMKMSKSIGNTIVPEKVVQQYGAD 672

Query: 324 ALRYFLVR 331
            LR ++ +
Sbjct: 673 ILRLWVAQ 680



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGNLHIGHALNKTIKDMIVRSHQMMGFDARYIPGWDCHGLPI 108


>gi|307249243|ref|ZP_07531240.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306858767|gb|EFM90826.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 938

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|212212949|ref|YP_002303885.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064865|sp|B6J1B2|SYL_COXB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212011359|gb|ACJ18740.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 820

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y 
Sbjct: 92  QRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KNAIVNWDPVDQTVLANEQIV----DGRGWRS-GAVVERREISQWFLKITDYSEELLKDL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE ++ ++R
Sbjct: 207 DELKEWPEQVITMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y            LL++N P   ++ + G +L  G K
Sbjct: 518 RAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPF-IRLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNV+ P  +I++ G D +R F++
Sbjct: 577 MSKSKGNVVTPQSLIKKYGADTVRLFII 604


>gi|53721846|ref|YP_110831.1| tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52212260|emb|CAH38282.1| putative tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 734

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R
Sbjct: 521 LLALGMVKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRR 579

Query: 350 VNADLAN--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRE 403
             A +A      + V+ + + I   +D   P     P A     +  L+   R    I  
Sbjct: 580 QRAFVARLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALQRRMQDWLATGGR---RIAA 636

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L 
Sbjct: 637 DFRRHDYHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLG 690

Query: 464 AFVPKLANKIF 474
            F P +A +++
Sbjct: 691 PFAPHVAEELW 701


>gi|33864825|ref|NP_896384.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81575298|sp|Q7U9G9|SYI_SYNPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33632348|emb|CAE06804.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 974

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++   +         ++  +PADL++ G D  R  F +    +  ++ + P
Sbjct: 556 MDVWFDSGSSWAAVSSQ------RESLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 609

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             K+V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR ++
Sbjct: 610 Y-KRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRLWV 662


>gi|76817892|ref|YP_337561.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254189889|ref|ZP_04896398.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254263827|ref|ZP_04954692.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
 gi|76582365|gb|ABA51839.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157937566|gb|EDO93236.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254214829|gb|EET04214.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
          Length = 734

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R
Sbjct: 521 LLALGMVKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRR 579

Query: 350 VNADLAN--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRE 403
             A +A      + V+ + + I   +D   P     P A     +  L+   R    I  
Sbjct: 580 QRAFVARLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALQRRMQDWLATGGR---RIAA 636

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L 
Sbjct: 637 DFRRHDYHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLG 690

Query: 464 AFVPKLANKIF 474
            F P +A +++
Sbjct: 691 PFAPHVAEELW 701


>gi|295105821|emb|CBL03364.1| valyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 896

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 21/176 (11%)

Query: 227 IMYVWIDALTNYLTTTGY----LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           ++  W  +      T G+    +D P+   A  +P  +    +DI+      W A ++ A
Sbjct: 461 VLDTWFSSQLWPFATMGWTEEGVDAPEMRAA--YPTQVLSTARDIMGL----WVARMVMA 514

Query: 283 NLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           ++   +++     I+H       G+ +SKS GN +DP+ ++E+ G D +R+ L+ ++   
Sbjct: 515 SMYCTEQIPFEHVIIHPTVMAADGKPMSKSRGNGVDPLRLMEDYGADGMRFGLLMQVTGA 574

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +D  +++  L+   N   AN I N  +R V M L  Y+   P P   T +D  I S
Sbjct: 575 QDLKFNEAKLESSRN--FANKIRN-AARFVMMNLDGYEPGEPAPS--TPADRWIFS 625


>gi|126207532|ref|YP_001052757.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|303251867|ref|ZP_07338038.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307260496|ref|ZP_07542190.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|166228632|sp|A3MYB6|SYI_ACTP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126096324|gb|ABN73152.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302649297|gb|EFL79482.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|306869808|gb|EFN01591.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 938

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|150399535|ref|YP_001323302.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012238|gb|ABR54690.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 1033

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 20/201 (9%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           KK   HGF L   GEK+SKSLGN++ P EV E+ G D LR++L+      +D  +    +
Sbjct: 582 KKCMMHGFTLDETGEKMSKSLGNIVSPDEVTEKYGADVLRFYLLSANKAWEDLRFSYSEM 641

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIR 402
            +  +A   N + N  + S + M+L   D  IP    F    + D  ILS  + V ++  
Sbjct: 642 DEVRSA--LNTLWNSYAFSTNYMVL---DEFIPNNEYFKHLKDEDAWILSRVNTVSKDAI 696

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDA---QKPWELKKTNPDRAST--VLYVTVEVIR 456
           E ++   +H     +   + +++ R++      + W ++K +  + S    LY    VI 
Sbjct: 697 EALEKPHLHTYTWMIRDFILNDLSRWYIKLIRDRTW-MEKNDVQKLSAYQTLYY---VIM 752

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           +L +++    P ++ +I+  L
Sbjct: 753 KLIMIMSPVTPHISEEIYQNL 773



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 30/159 (18%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--- 64
           Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N   
Sbjct: 40  YFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFN 99

Query: 65  --------AGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                     + T+VF+D+             + F+++   L     DF        +D 
Sbjct: 100 IGSKKDIETKIGTQVFIDKCKEFALNHLSNMEKQFKNLGIWL-----DFENAYMPIKNDY 154

Query: 106 CRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + W   KK  +K  + K   SG++  R E    + EV
Sbjct: 155 IEMGWWTLKKAHEKDLLTKDLRSGYWCPRCETSLAEHEV 193


>gi|29653898|ref|NP_819590.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|48428541|sp|Q83DY1|SYL_COXBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29541161|gb|AAO90104.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 820

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y 
Sbjct: 92  QRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KNAIVNWDPVDQTVLANEQIV----DGRGWRS-GAVVERREISQWFLKITDYSEELLKDL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE ++ ++R
Sbjct: 207 DELKEWPEQVITMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y            LL++N P   ++ + G +L  G K
Sbjct: 518 RAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPF-IRLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNV+ P  +I++ G D +R F++
Sbjct: 577 MSKSKGNVVTPQSLIKKYGADTVRLFII 604


>gi|27377246|ref|NP_768775.1| hypothetical protein blr2135 [Bradyrhizobium japonicum USDA 110]
 gi|27350389|dbj|BAC47400.1| blr2135 [Bradyrhizobium japonicum USDA 110]
          Length = 525

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 3/118 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +I  A   PN + H+GH   + + AD+  RF R+ G    + TG+DEHG    + A+  G
Sbjct: 5   FICPAPPCPNGKLHLGHIGGVYLPADIFVRFQRMAGHRAYYITGSDEHGTYTLETARKLG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG--DIYKG 122
            +     +       +    + I+ D F+RT+   H      +++++   G  D+ +G
Sbjct: 65  RSFSEVAEGYVHKILECLRAVQITPDVFVRTSSAIHKGNALAIFRELQAAGYVDVRQG 122



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 9/162 (5%)

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI---MYVWIDA 234
           S +E+  E + P   R +  +++   ++ L ++R  F  G+++      I   +  W + 
Sbjct: 197 SLHEAIGESVWPEPIRAKARAWLHREVRGLPMTRH-FRHGVEVKQPDSLIGQTLLTWFEG 255

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           L  + T         G  A     D     L  +G+D   ++ +     LL+   P+PK 
Sbjct: 256 LWCFDTGIREQCARAGLDANAALHDQNTEILFFMGQDNRFYYTLGVAGALLARGYPIPKN 315

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                F   KGEK S S  + +   EV  +VG + LRY L R
Sbjct: 316 HSVQDFYKLKGEKFSTSRDHALWGDEVAGDVGPNVLRYALAR 357


>gi|313632514|gb|EFR99522.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S+    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLTTAVAITGES 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 576 PY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|238651004|ref|YP_002916860.1| valyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259516952|sp|C4K2L1|SYV_RICPU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|238625102|gb|ACR47808.1| valyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 812

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 38/282 (13%)

Query: 223 DPQY-IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--W 275
           +P Y +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y   
Sbjct: 450 EPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTIL 509

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       
Sbjct: 510 KAHLHQNTLPWKNIMISGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KL 568

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  Y +D +K      L N + N    +   +   +D +        +   S+L +  
Sbjct: 569 GADTAYSEDVMKN--GKRLVNKLWN----AAKFVFIHFDKL-----KGEDKKASLLDIKE 617

Query: 396 RVLQEIRENMQNQLIHRA-----------------LAQVISLVSEVDRYFDAQK--PWEL 436
           ++  E  + M N+L+                    L +    V   D Y +  K   ++ 
Sbjct: 618 KITNEFDKWMVNKLVELVKLATNELQNYEYAHAMHLTEKFFWVVFCDNYLEISKTRSYDE 677

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 678 EHKNPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 35 KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|165919091|ref|ZP_02219177.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917225|gb|EDR35829.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 819

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y 
Sbjct: 92  QRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KNAIVNWDPVDQTVLANEQIV----DGRGWRS-GAVVERREISQWFLKITDYSEELLKDL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE ++ ++R
Sbjct: 207 DELKEWPEQVITMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y            LL++N P   ++ + G +L  G K
Sbjct: 517 RAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPF-IRLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNV+ P  +I++ G D +R F++
Sbjct: 576 MSKSKGNVVTPQSLIKKYGADTVRLFII 603


>gi|328865666|gb|EGG14052.1| hypothetical protein DFA_11815 [Dictyostelium fasciculatum]
          Length = 1039

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 12/133 (9%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +S +K   L R  F+    I DD   ++  W  +    ++  G+ DN     +KF+P D
Sbjct: 505 TESAIKTFGLKRGAFEL---IKDDD--VLDTWFSSSLFPMSALGWPDNKSLDLSKFYPLD 559

Query: 260 LHVIGKDILRF---HAIYWPAFLLSAN---LPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +   G DI+ F     +   + L  AN    P  + V  H  I   +G K+SKSLGNVID
Sbjct: 560 VMETGSDIMFFWVARMVMMCSTLFDANNQQQPPFETVLLHPLIRDSQGRKMSKSLGNVID 619

Query: 313 PIEVIEEVGVDAL 325
           P+ VI  + +  L
Sbjct: 620 PLHVINGIELPQL 632


>gi|303232750|ref|ZP_07319435.1| valine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481236|gb|EFL44311.1| valine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 894

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKSLGNV 310
           P  + V  +DI+      W A ++ ++L     +P   VF +  IL K G ++SKS GN 
Sbjct: 477 PTKVLVTARDIIAL----WVARMIMSSLYFTGDIPFHDVFIYATILAKDGSRMSKSKGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYD------KDGLKKRVNADLANGIGNLVSR 364
           +DP+E+I++ G DA+RY L+  I   +D  +D         LK+    + A      +  
Sbjct: 533 VDPMELIQKYGADAMRYNLLTLITGNQDVKFDAVIDKKTKKLKESPRTEQARAFVTKIWN 592

Query: 365 SVSMILKDYDGMIPT-PGAFTESDESILSVCSRVL 398
           +   +  + +G IP  P   T  D  +LS  +R++
Sbjct: 593 ASRFVQMNLNGYIPGDPKVRTAEDAWMLSRLARMV 627


>gi|215484666|ref|YP_002326901.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|226731221|sp|B7H051|SYL_ACIB3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|213987319|gb|ACJ57618.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 874

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGEAVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|52841578|ref|YP_095377.1| leucyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|60390674|sp|Q5ZVU2|SYL_LEGPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52628689|gb|AAU27430.1| leucyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 823

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +YK
Sbjct: 92  KNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F ++++Y D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITSYADELLSSLD 207

Query: 182 SHPEF 186
           S  E+
Sbjct: 208 SLDEW 212



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 RAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGNV+DP  +I   G D  R F++
Sbjct: 576 MSKSLGNVVDPNHLINTYGADTARLFVM 603


>gi|307610052|emb|CBW99587.1| leucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 823

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +YK
Sbjct: 92  KNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F ++++Y D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITSYADELLSSLD 207

Query: 182 SHPEF 186
           S  E+
Sbjct: 208 SLDEW 212



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 RAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGNV+DP  +I   G D  R F++
Sbjct: 576 MSKSLGNVVDPNHLINTYGADTARLFVM 603


>gi|307256065|ref|ZP_07537853.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865487|gb|EFM97382.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 938

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|296436459|gb|ADH18629.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|315500119|ref|YP_004088922.1| valyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418131|gb|ADU14771.1| valyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 938

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ ++   +F+P    V G DI+ F    W A ++   L
Sbjct: 508 VLDTWFSSALWPFSTMGW---PEQTRDLERFYPTHTLVTGFDIIFF----WVARMMMMGL 560

Query: 285 PLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               K     VF +  +   KG+K+SKS GNV+DP+ +I+E G DALR+ L      G+D
Sbjct: 561 HFTGKAPFQRVFINALVRDEKGQKMSKSKGNVMDPLVLIDEFGADALRFTLSAMSGQGRD 620



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     HIGHA    + DVL RF R+ G   L+  GTD           +AG+
Sbjct: 37 SIVIPPPNVTGSLHIGHALNNTLQDVLMRFERMRGKAALWLPGTD-----------HAGI 85

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 86 ATQMVVERQ 94


>gi|226952885|ref|ZP_03823349.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836396|gb|EEH68779.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 874

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYH-WEQWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|153207783|ref|ZP_01946383.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218820|ref|YP_002305607.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064864|sp|B6J863|SYL_COXB1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120576335|gb|EAX32959.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013082|gb|ACJ20462.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 820

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y 
Sbjct: 92  QRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KNAIVNWDPVDQTVLANEQIV----DGRGWRS-GAVVERREISQWFLKITDYSEELLKDL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE ++ ++R
Sbjct: 207 DELKEWPEQVITMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y            LL++N P   ++ + G +L  G K
Sbjct: 518 RAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPF-IRLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNV+ P  +I++ G D +R F++
Sbjct: 577 MSKSKGNVVTPQSLIKKYGADTVRLFII 604


>gi|154706352|ref|YP_001424850.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082995|sp|A9KCQ4|SYL_COXBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154355638|gb|ABS77100.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 820

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 32  REKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y 
Sbjct: 92  QRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAYK 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y ++LL   
Sbjct: 152 KNAIVNWDPVDQTVLANEQIV----DGRGWRS-GAVVERREISQWFLKITDYSEELLKDL 206

Query: 179 -YYESHPEFILPIER 192
              +  PE ++ ++R
Sbjct: 207 DELKEWPEQVITMQR 221



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y            LL++N P   ++ + G +L  G K
Sbjct: 518 RAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPF-IRLLTQGMVLKDGAK 576

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNV+ P  +I++ G D +R F++
Sbjct: 577 MSKSKGNVVTPQSLIKKYGADTVRLFII 604


>gi|117927949|ref|YP_872500.1| valyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648412|gb|ABK52514.1| valyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 888

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 21/187 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +      AKF+P  + V G DI+     +W A ++   L  
Sbjct: 447 VLDTWFSSALWPFSTLGWPEE-TADLAKFYPTSVLVTGYDII----FFWVARMMMFGLYA 501

Query: 285 --------PLPKKVFS-HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                    +P ++ +  G I   +G K+SKS GN IDPI+ I+  G DA R+ L+R  +
Sbjct: 502 MKHRGPRDAVPFRIVALTGLIRDERGRKMSKSAGNGIDPIDWIDRYGADATRFTLLRNAS 561

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D     +  +   N    N I N  +R   +      G IP     T +D  ILS  
Sbjct: 562 PGTDVSVGDEWAQASRN--FVNKIWN-AARFAMLNGATTQGPIPV-DELTTADRWILSRL 617

Query: 395 SRVLQEI 401
             V++++
Sbjct: 618 GSVVRDV 624


>gi|289435362|ref|YP_003465234.1| hypothetical protein lse_2001 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171606|emb|CBH28152.1| ileS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S+    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLTTAVAITGES 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 576 PY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 876

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 10/109 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+ +++ +     D+         PADL++ G D  R  F++       ++ 
Sbjct: 535 QDIMDVWFDSGSSHQSVLHQRDDLQR------PADLYLEGSDQYRGWFNSSLTTGVAVTG 588

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P  K V SHGF+   +G K+SKS+GN++ P +VI+++G D LR ++ 
Sbjct: 589 KAPY-KGVLSHGFVNDGEGRKMSKSIGNIVVPDKVIKQMGADILRLWVA 636



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G +  +  G D HG  I +A    GV  K   +
Sbjct: 73  YANGDLHMGHALNKVLKDFIVRYKSMSGYNAPYVPGWDTHGLPIEQALTKKGVNRK---E 129

Query: 75  QNSRNFRDMADVLDISYDDFIRT----------------TEKRHHDTCRI-LWKKISDKG 117
                FR + +       D  RT                T K  ++  +I ++  +++KG
Sbjct: 130 MTVAEFRKLCEEYAYGQIDSQRTQFKQIGVRGDWDNPYITMKPEYEAEQIKVFGDMANKG 189

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 190 YIYKGLKPVYWSPSSESALAEAEI 213


>gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|8928370|sp|O84022|SYI_CHLTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3328409|gb|AAC67609.1| Isoleucyl-tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|322493703|emb|CBZ28993.1| putative valyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 967

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K GL D  ++  +F+       DP  ++  W  +     +T G+  + D  K +F+P  L
Sbjct: 462 KFGLTDEQVAEASFE------QDPD-VLDTWFSSGLWPFSTLGWPTDSDDMK-RFFPNSL 513

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
              G DIL F         L     LP K+VF H  +  K GEK+SKS GNV+DP+ VI 
Sbjct: 514 METGHDILFFWVARMVMLSLHFTNKLPYKEVFLHAMVRDKNGEKMSKSKGNVVDPLYVIH 573

Query: 319 EVGVDAL 325
            V +  L
Sbjct: 574 GVSLQTL 580



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D L RFHR+ G + L+  GTD           +AG+ T+V V++     
Sbjct: 53  HLGHALTGAVQDTLIRFHRMKGDNTLYLPGTD-----------HAGIATQVVVERRVMK- 100

Query: 81  RDMADVLDISYDDFIR 96
            +     D+  D+F++
Sbjct: 101 EEGKSRHDLGRDEFMK 116


>gi|319744572|gb|EFV96925.1| isoleucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 930

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I  T     D  R+    ++DKG 
Sbjct: 118 AEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTPDYEADQVRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|255310820|ref|ZP_05353390.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317120|ref|ZP_05358366.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDTYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|124382713|ref|YP_001024595.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|238561164|ref|ZP_04609455.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|238525147|gb|EEP88576.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 1039

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115


>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166229756|sp|A2BP36|SYI_PROMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 968

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 33/280 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++            S+ K+ PADL++ G D    H  ++ + LL++    N
Sbjct: 553 MDVWFDSGSSWAAVCELR-----SELKY-PADLYLEGSDQ---HRGWFQSSLLTSVAVNN 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
            P  KKV +HGF L   G K+SKSLGNV+DP  +I            G D LR + V  +
Sbjct: 604 KPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTEPAYGADVLRLW-VSSV 662

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESIL 391
               D     + LK+   AD+   + N  +R +   + DYD  I +         D+ +L
Sbjct: 663 DYSVDVPIGSNILKQL--ADVYRKVRN-TARYLLGNIHDYDPNIDSYEIDQLPLLDQWML 719

Query: 392 SVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVL 448
                V  +I    +N    +   + Q   +V   + Y D A+    +   +  R  +  
Sbjct: 720 GRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSSKSQFRRRSCQ 779

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQ 487
           +V  +V+  LA+L+   +  +A  I+ +I ++  E   FQ
Sbjct: 780 FVMSKVVENLAVLISPVLCHMAEDIWQNIPYLTKEKSVFQ 819


>gi|110804709|ref|YP_688229.1| leucyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110614257|gb|ABF02924.1| leucine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 891

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKHHTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 235


>gi|54297257|ref|YP_123626.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|60390670|sp|Q5X5L8|SYL_LEGPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53751042|emb|CAH12453.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 823

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +YK
Sbjct: 92  KNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F ++++Y D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITSYADELLSSLD 207

Query: 182 SHPEF 186
           S  E+
Sbjct: 208 SLDEW 212



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 RAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGNV+DP  +I   G D  R F++
Sbjct: 576 MSKSLGNVVDPNHLINTYGADTARLFVM 603


>gi|89093564|ref|ZP_01166512.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082254|gb|EAR61478.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 938

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 15/117 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     DN +      +PAD+++ G D  R  F +       +    P  
Sbjct: 536 VWFDSGVTHYSVIDQRDNLE------FPADMYLEGSDQHRGWFQSSLKTGIAIKGCAPY- 588

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           K+V +HGF +  +G K+SKS+GNV+ P EV+ + G D LR ++       E+ C  D
Sbjct: 589 KQVLTHGFTVDGQGRKMSKSVGNVVAPQEVMNKYGADILRLWVASTDYSGEMTCSDD 645



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 7/98 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I    +
Sbjct: 48  RNKFTLHDGPPYANGDIHIGHAVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIEHKVE 107

Query: 64  NAGVTTKVFVDQNSRNFRD-----MADVLDISYDDFIR 96
                 K  V  + ++FR       A  ++    DFIR
Sbjct: 108 TK--HGKAGVKLSHKDFRQKCRDYAARQVEGQKKDFIR 143


>gi|88859089|ref|ZP_01133730.1| valine tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819315|gb|EAR29129.1| valine tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 948

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 117/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+  N D  K  F P+D+ V G DI+ F    W A ++   L  
Sbjct: 469 VLDTWFSSALWTFSTQGWPANTDDLKT-FHPSDVLVTGFDIIFF----WVARMIMMTLHF 523

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I    G+K+SKS GNV+DPI++I+ +              
Sbjct: 524 IKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMM 583

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D + L    N    N 
Sbjct: 584 QPQLAKKIEQNTRKTFTDGIEAHGTDALRFTLAAMASTGRDINWDMNRLDGYRN--FCNK 641

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  ++ D G       ++ +D  IL       +   E++ N     A + 
Sbjct: 642 LWN-ASRYVLMNTEEKDCGFNGGTMEYSLADRWILGQFQTTTKIFTEHLDNYRFDLAAST 700

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V         D Y +  KP   K T  ++  T  +V V V+  L  L+   +P +   I+
Sbjct: 701 VYEFTWNQFCDWYLELTKPILFKGTENEQRGT-RHVLVTVLEGLLRLMHPLMPYITETIW 759



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA++  I D L RF R+ G + L+  GTD           +AG+
Sbjct: 34 SIMIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTD-----------HAGI 82

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 83 ATQMVVER 90


>gi|77408400|ref|ZP_00785140.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77414696|ref|ZP_00790829.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159256|gb|EAO70434.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77173003|gb|EAO76132.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 930

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I  T     D  R+    ++DKG 
Sbjct: 118 AEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTPDYEADQVRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|126445547|ref|YP_001062206.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126456148|ref|YP_001075169.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312751|ref|ZP_04811768.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
 gi|126225038|gb|ABN88543.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126229916|gb|ABN93329.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135990|gb|EES22393.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
          Length = 734

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 102 EAGCAPERLARECS 115



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R
Sbjct: 521 LLALGMVKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRR 579

Query: 350 VNADLAN--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRE 403
             A +A      + V+ + + I   +D   P     P A     +  L+   R    I  
Sbjct: 580 QRAFVARLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALHRRMQDWLATGGR---RIAA 636

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L 
Sbjct: 637 DFRRHDYHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLG 690

Query: 464 AFVPKLANKIF 474
            F P +A +++
Sbjct: 691 PFAPHVAEELW 701


>gi|71018857|ref|XP_759659.1| hypothetical protein UM03512.1 [Ustilago maydis 521]
 gi|46099417|gb|EAK84650.1| hypothetical protein UM03512.1 [Ustilago maydis 521]
          Length = 1240

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     +  G+ +  D  K  F+P+ +   G DIL     +W A +      L
Sbjct: 757 VLDTWFSSGLWPFSIMGWPEKTDDFK-HFYPSSMLETGWDIL----FFWVAKMCMLGVYL 811

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  LP  K+VF H  +    G K+SKSLGNVIDP++VIE + +D L
Sbjct: 812 TGTLPF-KEVFCHAMVRDAHGRKMSKSLGNVIDPLDVIEGISLDGL 856


>gi|327334791|gb|EGE76502.1| isoleucine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 1122

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDSVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 +   G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGSGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|289810791|ref|ZP_06541420.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 68

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 34/63 (53%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65 AGV 67
           G+
Sbjct: 66 LGI 68


>gi|94269042|ref|ZP_01291356.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451369|gb|EAT02231.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 889

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 23/265 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +     K  F+P  + +   DIL     +W A ++   L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPEQTRELKM-FYPTSVLITSFDIL----FFWVARMMMMGLHF 505

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P + V+ H  +  K G+K+SKS GNV+DP+E+++  G DALR+ +    A G++  
Sbjct: 506 MDEVPFRHVYLHALVRDKHGQKMSKSKGNVLDPLELMDRYGTDALRFTMAAFAAQGREIK 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD------YDGMIPTPGAFTESDESILSVC 394
             ++ ++   +    N + N  +R   M L D       + +       +  D  ILS  
Sbjct: 566 LAEERIEGYRH--FINKLWN-AARFTLMQLDDEGRSATEEALASDSATLSLPDRWILSRS 622

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           SRV   +   + +   + A +     V +   D Y +  KP EL    P        V +
Sbjct: 623 SRVAAAVGGALDDFRFNDAASAAYQFVWKEFCDWYLEWIKP-ELYGDEPAARERSRRVLL 681

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            V+  +  +L   +P +  +I+  L
Sbjct: 682 TVLEDILKMLHPMIPFVTEEIWHAL 706



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +K   S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G     
Sbjct: 35  DEDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAG----I 90

Query: 61  AAQNAGVTTKVFVDQN 76
           A QN  V  +   DQ 
Sbjct: 91  ATQN--VVERQLADQG 104


>gi|332038093|gb|EGI74540.1| leucyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 862

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 2/145 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRTQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG 144
           YK   +  +   D+    +++V  G
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG 174


>gi|325474629|gb|EGC77815.1| isoleucyl-tRNA synthetase [Treponema denticola F0402]
          Length = 1100

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 27/246 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +PAD    G D  R    ++   +L+A L   P  K    +G +L + G+K+SKSL N
Sbjct: 576 KNFPADFISEGLDQTR--GWFYTLTILAAALFDEPAFKNCIVNGLVLAEDGKKMSKSLRN 633

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSM 368
             DP EVI++ G DALR FL+       D   Y  +G++  +   L   I    S S  +
Sbjct: 634 YTDPNEVIKQFGADALRLFLMNSNVVKADDLKYSDEGVRDVLKGIL---IPFWNSYSFYI 690

Query: 369 ILKDYDGMIPTPGAFTESDES----------------ILSVCSRVLQEIRENMQNQLIHR 412
              + DG+ P   A  +  +                 ILSV  +++ ++ E +    + +
Sbjct: 691 TYANIDGVKPPHNAKVDGKDEGVESFLSKLNNPLDLWILSVTEKLVADVTEALDKYDLSQ 750

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLAN 471
           A+  ++  +  ++ ++  +      K+  D      Y T+   +++ +++    VP +  
Sbjct: 751 AIPPMVEYIDLLNNWYIRRSRRRFWKSENDGDKAQAYETLYRALKKFSLVAAPVVPFITE 810

Query: 472 KIFDIL 477
            I+  L
Sbjct: 811 SIWQNL 816


>gi|291519314|emb|CBK74535.1| Leucyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 472

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHK-GEK 302
           K K+W P D +  G + +  H IY   W  FL      N P P KK  + G IL + G+K
Sbjct: 192 KLKYWMPVDWYNGGMEHVTRHLIYSRFWHHFLYDIGVVNTPEPYKKRSAQGMILGEDGQK 251

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GNVIDP+++++  G D LR +++
Sbjct: 252 MSKSRGNVIDPLDIVDAYGADTLRTYVL 279


>gi|165975502|ref|YP_001651095.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|165875603|gb|ABY68651.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 922

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 511 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 559

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 560 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 619

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 620 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 670 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 705


>gi|159905582|ref|YP_001549244.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159887075|gb|ABX02012.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 1034

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 20/205 (9%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +K   HGF L   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +    +
Sbjct: 583 EKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEM 642

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIR 402
            +     + N + N  + S + M+L D+   +P    F    + D  ILS  + V +E  
Sbjct: 643 DE--TRSMLNTLWNSYAFSANYMVLDDF---VPNDEYFKHVKDEDAWILSRINTVAKEAV 697

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDA---QKPWELKKTNPDRAST--VLYVTVEVIR 456
           E ++   +H     +   V ++  R++      + W ++K +  + S    LY    VI 
Sbjct: 698 EALEKPHLHTYTWTLRDFVLNDFSRWYIKLIRDRTW-MEKNDVQKLSAYQTLYY---VIM 753

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
           +L  ++    P L+ +I+  L   D
Sbjct: 754 KLISIMAPVTPHLSEEIYQNLKTED 778



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 40 YFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96


>gi|89900225|ref|YP_522696.1| isoleucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344962|gb|ABD69165.1| Isoleucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 975

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 19/114 (16%)

Query: 227 IMYVWIDALTNYLTT-------TGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
           I+ VW D+ T + T        +G+ D P+        ADL++ G D  R  FH+    A
Sbjct: 574 ILEVWFDSGTTHTTVLKGSHPGSGHPDGPE--------ADLYLEGHDQHRGWFHSSLLTA 625

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +    P  K + +HGF +  KG K+SKS GN +DP E  +++G + +R ++ 
Sbjct: 626 CAMYGRAPY-KGILTHGFTVDSKGHKMSKSAGNGVDPQETSKKLGAEIIRLWVA 678



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 14/130 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +     Y N Q H+GHA   I+ D++ +  +L G+D  +  G D HG  I  A +  
Sbjct: 78  KFVLHDGPPYANGQIHMGHAVNKILKDMIVKARQLKGMDAAYIPGWDCHGLPIENAIEKK 137

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDF------------IRTTE-KRHHDTCRILWKK 112
                   D  +R+     + +D+  +DF             RT + K   D  R   K+
Sbjct: 138 YGRKLARDDMQARSRAYATEQIDLQREDFKRLGVLGDWDHPYRTMDFKNEADEIRAF-KR 196

Query: 113 ISDKGDIYKG 122
           + ++G +Y+G
Sbjct: 197 VVERGFVYRG 206


>gi|74183057|dbj|BAE20481.1| unnamed protein product [Mus musculus]
          Length = 405

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199


>gi|15673845|ref|NP_268020.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537525|sp|Q9CEH8|SYI_LACLA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12724895|gb|AAK05961.1|AE006416_6 isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 932

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 37/277 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  D      +PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSW---NGVLNERDYLS---FPADLYLEGSDQYRGWFNSSITTSVAVNGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF+L  KG K+SKS+GN I P +V ++ G D LR + V  I    D     
Sbjct: 576 PY-KAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLW-VASIDTESD----- 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGA--FTE---SDESILSVCS 395
                RV+ D+ + +  +   +  ++  ++ +     P   A  F E    D+ +L   +
Sbjct: 629 ----VRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFN 684

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRAS--TVLY 449
            ++++IR    N         +I+ ++      Y D  K   +     +P+R S  TV+Y
Sbjct: 685 ELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMY 744

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           V   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 745 V---ILKDLVKILVPILPHTAEETWTYLEHEPENFAY 778



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R+  + G    +  G D HG  I +    AG+  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +  + D  +D    T    +      ++ K+++KG 
Sbjct: 118 LDYLEECRKYAMKQVDMQRSDFKSLGVLAD--WDRPYLTLLPEYEAAQIRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGQKPIYWSPSSESSLAEAEI 198


>gi|25010601|ref|NP_734996.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457393|sp|Q8E6N1|SYI_STRA3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|23094954|emb|CAD46176.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 930

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I  T     D  R+    ++DKG 
Sbjct: 118 AEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTPDYEADQVRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|77411442|ref|ZP_00787788.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162528|gb|EAO73493.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 930

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I  T     D  R+    ++DKG 
Sbjct: 118 AEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTPDYEADQVRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|313637043|gb|EFS02610.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 921

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S+    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLNA--RPELSR----PADLYMEGSDQYRGWFNSSLTTAVAITGES 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 576 PY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  D  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVDGQRTGFKR 141


>gi|293611283|ref|ZP_06693581.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826534|gb|EFF84901.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 945

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 25/196 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+   L   + NL     S    D D +I         D+ IL   + V Q I
Sbjct: 659 RVSDSYRRIRNTLRFLLANLNGFKPSTDALDVDDLIAL-------DQYILQRANEVQQTI 711

Query: 402 ---RENMQNQLIHRAL 414
               E M   ++  AL
Sbjct: 712 ITAYEEMNFHVVCSAL 727



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ DV+ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDVIVKSRTLSGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR +     +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKLCREYALKQIDLQRTDFKR 152


>gi|261878961|ref|ZP_06005388.1| leucine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334415|gb|EFA45201.1| leucine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 953

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  DRRKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKI 113
           A   G    +  + N   +R+  D +   +  D  IRT + +++   +  ++K+
Sbjct: 89  AIQTGQHPAITTETNIARYREQLDKIGFCFDWDREIRTCDPKYYHWTQWAFQKM 142


>gi|315500447|ref|YP_004089250.1| isoleucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418459|gb|ADU15099.1| isoleucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 988

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T       +G +    PADL++ G D  R  F +    +       
Sbjct: 589 ILDVWFDSGSTHAFTL------EGRENTHSPADLYLEGSDQHRGWFQSSLLESCGTRGRA 642

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF+L  +GEK+SKS GNV+ P ++ +E GV+ LR ++ 
Sbjct: 643 PY-KAVLTHGFVLDEQGEKMSKSKGNVVAPQDIAKESGVEILRLWVA 688


>gi|237802453|ref|YP_002887647.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273687|emb|CAX10465.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis B/Jali20/OT]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|226360454|ref|YP_002778232.1| valyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238939|dbj|BAH49287.1| valyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 891

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 25/165 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPK----KVFSHGFILHK-G 300
           KF+P  + V G DIL F       F         +S     P+     VF HG +  + G
Sbjct: 482 KFYPTSVLVTGYDILFFWVARMMMFGTYVSEDDAISGGKSGPQMPFDDVFLHGLVRDQFG 541

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  + N
Sbjct: 542 KKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGEDHAQSSRN--FATKLFN 599

Query: 361 LVSRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEI 401
               ++       +G  P P    G  T++D  IL    +V  ++
Sbjct: 600 ATKFAL------MNGAAPAPLPGRGELTDADRWILDRLDQVRGDV 638


>gi|157826014|ref|YP_001493734.1| isoleucyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166229762|sp|A8GPA1|SYI_RICAH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157799972|gb|ABV75226.1| isoleucyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 1103

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 12/209 (5%)

Query: 290 VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDGLK 347
              HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   I  G++   DKDG  
Sbjct: 615 CICHGVILDATGQKLSKRLNNYADPLELFDQYGSDALRVTMLSSNIVKGQELLIDKDG-- 672

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV-----CSRVLQEIR 402
           K V   L   I  + S      +  Y       G  + + E++L V         + +I 
Sbjct: 673 KMVFDTLRLFIKPIWSSYHFFTM--YANADSLKGEISFASENVLDVYILSKLKIAVSKIE 730

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAIL 461
           E++ N     A   V+     ++ ++  +      K+  D      Y T+   ++ +AI 
Sbjct: 731 ESLDNFDTQTAYHAVLEFFEVLNNWYIRRSRARFWKSEKDTDKQNAYNTLYSCLKTMAIA 790

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLD 490
           + A VP ++  I+  L   +E     S D
Sbjct: 791 MSALVPMISEAIYKGLCHCEETSTLSSRD 819


>gi|254372856|ref|ZP_04988345.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570583|gb|EDN36237.1| leucyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 813

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|114769846|ref|ZP_01447456.1| leucyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549551|gb|EAU52433.1| leucyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 844

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 12/184 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 29  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKSAVGFNVLHPMGWDAFGMPAENAAM 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V    +  QN  + R     + +S D   +F  T +  ++   + ++  +  K  +Y
Sbjct: 89  EKNVHPGDWTYQNIADMRAQLKPMGLSIDWSREFA-TCDPEYYGQQQAMFIDMMSKELVY 147

Query: 121 -KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  +      N+  E  KG        +    QW      FF++S Y ++LLS
Sbjct: 148 RKNAVVNWDPVDMTVLANEQVENGKGWRSGALVERKELTQW------FFKISEYSEELLS 201

Query: 179 YYES 182
             +S
Sbjct: 202 ALDS 205


>gi|7527726|gb|AAF63175.1|AC010657_11 T5E21.11 [Arabidopsis thaliana]
          Length = 1115

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 16/157 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    W A ++  
Sbjct: 623 DPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFF----WVARMVMM 676

Query: 283 NLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L       KV+ H  I    G K+SKSLGNVIDP+EVI  V ++ L   L       
Sbjct: 677 GMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDP 736

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           K+    K+G  K    D  NGI    + ++   L  Y
Sbjct: 737 KEVIVAKEGQVK----DFPNGIPECGTDALRFALVSY 769


>gi|22536664|ref|NP_687515.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76788204|ref|YP_329219.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77405574|ref|ZP_00782664.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|81454978|sp|Q8E177|SYI_STRA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84029569|sp|Q3K2N4|SYI_STRA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|22533504|gb|AAM99387.1|AE014214_1 isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76563261|gb|ABA45845.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77175796|gb|EAO78575.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 930

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I  T     D  R+    ++DKG 
Sbjct: 118 AEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTPDYEADQVRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|325124001|gb|ADY83524.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 945

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 25/196 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+   L   + NL     S    D D +I         D+ IL   + V Q I
Sbjct: 659 RVSDSYRRIRNTLRFLLANLNGFKPSTDALDVDDLIAL-------DQYILQRANEVQQTI 711

Query: 402 ---RENMQNQLIHRAL 414
               E M   ++  AL
Sbjct: 712 ITAYEEMNFHVVCSAL 727



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ DV+ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDVIVKSRTLSGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR +     +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKLCREYALKQIDLQRTDFKR 152


>gi|296434604|gb|ADH16782.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|226193372|ref|ZP_03788980.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225934578|gb|EEH30557.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 115

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 35/63 (55%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA+
Sbjct: 42  RPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAAR 101

Query: 64  NAG 66
            AG
Sbjct: 102 EAG 104


>gi|226226805|ref|YP_002760911.1| isoleucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089996|dbj|BAH38441.1| isoleucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 1097

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 105/253 (41%), Gaps = 27/253 (10%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP-------LP-KKVFSHG 294
            +N D  +A++ PAD    G D  R  F+++   A  L   LP        P + V  + 
Sbjct: 573 FENADKVQAQY-PADYICEGVDQTRGWFYSLLAIATTLGDALPNNGDDMAAPYRNVVVND 631

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +L   G+K+SKS GNV++P EV+E  G DA+R FLV          +D++ +++     
Sbjct: 632 LVLDASGQKMSKSRGNVVNPWEVLERHGADAVRLFLVGSSQVWVPRRFDENAIRETAGRF 691

Query: 354 LANGIGNLVSRSV-SMILKDYDGMIPTPGAFTES-------DESILSVCSRVLQEIRENM 405
           L      L  R+V + I   Y     TP A           D  ILS  SRV QE  +++
Sbjct: 692 L------LTVRNVYNGIFAQYANFGWTPSAADPQIADRPALDRWILSRLSRVEQEANQHL 745

Query: 406 QNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            N     A  +V+  +  +V +++  Q                     EV+     LL  
Sbjct: 746 NNYDATLAARRVMQFMDDDVSKWYVRQSRARFYDVEGADNRAAFATLHEVLTVTCRLLAP 805

Query: 465 FVPKLANKIFDIL 477
           F P + + +   L
Sbjct: 806 FAPFMTDALHRAL 818


>gi|110834808|ref|YP_693667.1| leucine-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647919|emb|CAL17395.1| leucine-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 822

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 39  KEKFYCLSMFPYPSGRLHMGHVRNYSIGDVVSRYQRMLGKNVLQPMGWDAFGLPAENAAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    R     L   YD    + T    ++   +  + K+ +KG +Y+
Sbjct: 99  KNKVAPAKWTFENIDYMRGQLQRLGFGYDWGRELATCTPEYYRWEQWFFTKLYEKGLVYR 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG+ + +    V+  E   +F +++ Y D+LL+   
Sbjct: 159 KMSTVNWDPVDQTVLANEQVI---DGRGWRS-GALVEQKEIPQWFIKITDYADELLNDLD 214

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 215 QLDGWPEQVKTMQR 228



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D +   +W P D ++ G +    H +Y   F        L++ + P  K++   G +L  
Sbjct: 520 DPAATNYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDTGLVNCDEPF-KQLLCQGMVLKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G K+SKS GN +DP ++IEE G D +R F++
Sbjct: 579 GAKMSKSKGNTVDPQQMIEEYGADTVRLFMM 609


>gi|15892508|ref|NP_360222.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|32130175|sp|Q92I35|SYL_RICCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15619667|gb|AAL03123.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 835

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N +N +     +  SYD
Sbjct: 86  KNNSHPKKWTYSNIKNMKKQLKSMGFSYD 114


>gi|325137232|gb|EGC59827.1| valyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 945

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLEKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|308388392|gb|ADO30712.1| valyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325131064|gb|EGC53788.1| valyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325202991|gb|ADY98445.1| valyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207211|gb|ADZ02663.1| valyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 945

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLEKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|307244845|ref|ZP_07526944.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307253799|ref|ZP_07535653.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258255|ref|ZP_07539998.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306854290|gb|EFM86496.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306863283|gb|EFM95223.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867715|gb|EFM99560.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 938

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|294649289|ref|ZP_06726724.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824842|gb|EFF83610.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 874

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N    RD    L +S D   +F   T + +H   + L+ ++  KG I
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYH-WEQWLFVQLYKKGLI 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+   +  +   D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 155 YRKLSTVNWDPVDQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 203


>gi|187931682|ref|YP_001891666.1| leucyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691565|sp|B2SGM9|SYL_FRATM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187712591|gb|ACD30888.1| leucyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 813

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|305666031|ref|YP_003862318.1| isoleucyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710806|gb|EAR03038.1| isoleucyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 1133

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 252 KAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           K + +PAD    G D  R  F+ ++  A ++  ++   K V S+G +L K G+K+SK LG
Sbjct: 629 KGETFPADFIAEGVDQTRGWFYTLHAIATMVFDSVAY-KNVVSNGLVLDKEGKKMSKRLG 687

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP E ++E G DA R++++       +  +D DG+
Sbjct: 688 NAVDPFETMDEHGPDATRWYMISNANPWDNLKFDIDGI 725


>gi|289577538|ref|YP_003476165.1| leucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527251|gb|ADD01603.1| leucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 816

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 42/240 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       +   P K   H G IL   G ++S
Sbjct: 519 KMLPVDKYVGGAEHATMHLLY-ARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P E I+E G D  R +L+   A  + G ++ DG+K              +SR
Sbjct: 578 KSKGNVISPDEYIKEYGSDVFRLYLMFGFAYSEGGPWNDDGIK-------------AISR 624

Query: 365 SVSMILKDYDGMIPT---PGAFTES---DESILS-VCSRVLQEIRENMQNQLIHRALAQV 417
            V+ + +  D  I T   PG   +    DE+ L+ V    ++ + E+ +    + A+A++
Sbjct: 625 FVNRVERFIDKFIETRNNPGKTKDEMGKDENELNYVRHYAIKGVTEDAERFQFNTAIARI 684

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ + +Y            + D     +    +V+  L  LL  F P  + ++++ L
Sbjct: 685 MELVNALYKY------------DTDVEVKNIEFYEDVVADLIRLLAPFAPHFSEEMWEKL 732



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +T   +    +  R+M    D  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYE 122


>gi|189083249|sp|Q0VN53|SYL_ALCBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 815

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYSIGDVVSRYQRMLGKNVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  +N    R     L   YD    + T    ++   +  + K+ +KG +Y+
Sbjct: 92  KNKVAPAKWTFENIDYMRGQLQRLGFGYDWGRELATCTPEYYRWEQWFFTKLYEKGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D+    +++V    DG+ + +    V+  E   +F +++ Y D+LL+   
Sbjct: 152 KMSTVNWDPVDQTVLANEQVI---DGRGWRS-GALVEQKEIPQWFIKITDYADELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             +  PE +  ++R
Sbjct: 208 QLDGWPEQVKTMQR 221



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D +   +W P D ++ G +    H +Y   F        L++ + P  K++   G +L  
Sbjct: 513 DPAATNYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDTGLVNCDEPF-KQLLCQGMVLKD 571

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G K+SKS GN +DP ++IEE G D +R F++
Sbjct: 572 GAKMSKSKGNTVDPQQMIEEYGADTVRLFMM 602


>gi|189083222|sp|Q0T6Q2|SYL_SHIF8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKHHTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +   D+    +++V    DG  +      V+  E   +F +++AY D+LL+
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVI---DGCCWRCD-TKVERKEIPQWFIKITAYADELLN 204


>gi|167755754|ref|ZP_02427881.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
 gi|167704693|gb|EDS19272.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
          Length = 901

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++   TG +      +   +P DL+  G D  R  F++            
Sbjct: 515 IMDVWFDSGSSH---TGCMI----ERGYRYPVDLYFEGSDQYRGWFNSSLIVGTAAHGCA 567

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K V SHGF+L  KG K+SKSLGN +DPI+++ + G D +R
Sbjct: 568 PY-KTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVNQYGADIVR 609



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E         Y N   H+GH    +I DV+ R++ ++G    +  G D HG  I  A
Sbjct: 37  KGKEDFVFHDGPPYANGNMHMGHMLNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIENA 96

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD 85
            Q  GV  K   + ++  FR+  D
Sbjct: 97  IQKLGVNRK---EMSTAAFREKCD 117


>gi|166155115|ref|YP_001653370.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|259511500|sp|B0BB05|SYI_CHLTB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|165931103|emb|CAP06667.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           +L + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LLGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P ++  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFISEDMYQQL 766


>gi|88598973|gb|ABD44443.1| isoleucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 1114

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 9/96 (9%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLGNV 310
           +PAD   I + I +    ++  F+LS  +    P  +    HG IL  +G+K+SK L N 
Sbjct: 599 FPADF--ITEYIAQTRGWFYTLFVLSTGIFDKHPF-ESCICHGVILDIQGQKLSKRLNNY 655

Query: 311 IDPIEVIEEVGVDALRYFLV-REIACGKDGFYDKDG 345
           +DP+EV E  G D+LR+ L+   ++ G D   D+DG
Sbjct: 656 LDPMEVFERFGADSLRFMLLSSSVSTGGDLLLDQDG 691


>gi|15639443|ref|NP_218893.1| isoleucyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025684|ref|YP_001933456.1| isoleucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094404|sp|O83466|SYI_TREPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511520|sp|B2S348|SYI_TREPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3322738|gb|AAC65439.1| isoleucyl-tRNA synthetase (ileS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018259|gb|ACD70877.1| isoleucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 1091

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 33/254 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           +++PA  H I + + +    ++   +L+  L   P  +     G +L   G+K+SK+L N
Sbjct: 575 RYFPA--HFISEGLDQTRGWFYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRN 632

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRS 365
             DP EV++  G DALR FLVR      D   Y  +G+K   K V   L N      S S
Sbjct: 633 YADPNEVMDRYGADALRLFLVRSAVVRADDLKYSDEGVKDILKTVIIPLWN------SYS 686

Query: 366 VSMILKDYDGMIPTPGAFTES----------------DESILSVCSRVLQEIRENMQNQL 409
             +   + DG+ P   A  +                 D  ILS+  +++Q+I   +    
Sbjct: 687 FYVTYANIDGIDPPVCAKVDGMGQAVTRLATHLNNPLDRWILSLTEKLVQDIACALDAYD 746

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPK 468
           + +    ++S V +++ ++  +      K+  D      Y T+  V+++  + +   VP 
Sbjct: 747 VSKVADPIVSYVDQLNNWYIRRSRRRFWKSINDEDKRCAYNTLYCVLKRCVLAIAPVVPF 806

Query: 469 LANKIFDILFVADE 482
           +   I+  +  AD+
Sbjct: 807 ITESIWQNIRAADD 820


>gi|34580499|ref|ZP_00141979.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261884|gb|EAA25388.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 835

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N +N +     +  SYD
Sbjct: 86  KNNSHPKKWTYSNIKNMKKQLKSMGFSYD 114


>gi|237804368|ref|YP_002888522.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272668|emb|CAX09571.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis B/TZ1A828/OT]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|167723126|ref|ZP_02406362.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 318

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I     +   Q H+GHA   ++AD  +RF R+ G +VL+TTG D  G     AA+
Sbjct: 45  RPKWFIVELPPFATGQLHMGHARNYVLADADSRFRRMQGYNVLYTTGFDTFGLPTELAAR 104

Query: 64  NAGVTTKVFVDQNS 77
            AG   +    + S
Sbjct: 105 EAGCAPERLARECS 118


>gi|23346617|ref|NP_694808.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|48428659|sp|Q8VDC0|SYLM_MOUSE RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|18250728|emb|CAD20988.1| leucyl-tRNA synthetase [Mus musculus]
 gi|51330502|gb|AAH80303.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|148877726|gb|AAI45983.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|223459884|gb|AAI38207.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199


>gi|300934274|ref|ZP_07149530.1| valyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 943

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K VF HG +   KG K+SKSLGN IDP++ + + G DALR+ L R    G D    +D  
Sbjct: 564 KDVFLHGLVRDEKGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGSDLPVGEDSA 623

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +   N   A  + N  +   +++     G +P     T++D  IL    +V
Sbjct: 624 QSSRN--FATKLFN--ATKFALMNGAQVGDLPAREELTDADRWILDRLEQV 670



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 14/116 (12%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K   S  +  PN   Q H+GHA +  + D +AR  R+ G +VL+  G+D          
Sbjct: 57  DKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRKRMQGYEVLWLPGSD---------- 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +AG+ T+  V+   +   +  D  D   ++FI    K  H    ++  ++   GD
Sbjct: 107 -HAGIATQTKVEAKLKE-TEGKDRFDYGREEFIERVWKWKHQYGDVITNQMRAVGD 160


>gi|262382345|ref|ZP_06075482.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301308439|ref|ZP_07214393.1| valine--tRNA ligase [Bacteroides sp. 20_3]
 gi|262295223|gb|EEY83154.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300833909|gb|EFK64525.1| valine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 873

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 32/247 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NPD  +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 472 INNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKMPF-KSVYFTGIVR 526

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D D L ++   +  N
Sbjct: 527 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMLAAPAGNDIPFD-DALCEQ-GRNFNN 584

Query: 357 GIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N        ++K +  D  I  P A   + +       + + E+ ++     +  A+
Sbjct: 585 KIWNAFR-----LVKGWTVDDTIAQPEASAIAVKWFKMQLDKTIAEVDDSFSKYRLSEAM 639

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P     +   T E        L  LL  F+P + 
Sbjct: 640 MAVYKL------FWDEFSSWYLEMVKPGYQQPIDKATYEATLGFFDALLRLLHPFMPFIT 693

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 694 EELWQAL 700


>gi|229918560|ref|YP_002887206.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469989|gb|ACQ71761.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 908

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 15/150 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  +  +    PADL++ G D  R  F++    A   +   
Sbjct: 521 IMDVWFDSGSSH---AGVLEERENLRR---PADLYLEGSDQYRGWFNSSLSTAVATTGKA 574

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGKD 338
           P  + V SHGF+L   G K+SKSLGN I P +++++ G + +R ++       ++    D
Sbjct: 575 PY-RNVLSHGFVLDGDGRKMSKSLGNTIAPNDLVKQYGAEIVRLWVASVDYQSDVRASHD 633

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            F     + +++   +   +GNL     SM
Sbjct: 634 NFKQVSEVYRKMRNTIRFLLGNLNGFEPSM 663



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   ++ D++ RF  ++G       G D HG  I  A Q AGV  K    
Sbjct: 58  YANGDIHMGHAMNKVLKDIIVRFKGMNGYQSPMIPGWDTHGLPIENALQKAGVNRKEMTV 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         V+     F+ +  + D   + +I    +      R L+  +++KG 
Sbjct: 118 AEFREKCAEYAMEQVNSQREQFKRLGLLADFE-NPYITLLPEYEAAQIR-LFGSMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGKKPVYWSPSSESALAEAEI 198


>gi|260583637|ref|ZP_05851385.1| leucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158263|gb|EEW93331.1| leucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 804

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 32/191 (16%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +  N    +K+F+ G IL +G
Sbjct: 514 DPEKLKEWLPVDLYIGGAEHAVLHLLYARFWYKVLYDLGVVPNKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +V+ + G D LR +      L   IA  + G        +RV   
Sbjct: 574 NEKMSKSKGNVVNPDDVVRQYGADTLRLYEMFMGPLDASIAWSEKGLEGSRKFLERVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L +  G L  R  +                  +D S+  +  + ++++ E+ +    + A
Sbjct: 634 LVDEEGKLRDRITTF-----------------NDGSLDKIYHQTVKKVTEDYEALRFNTA 676

Query: 414 LAQVISLVSEV 424
           ++Q++  V+E 
Sbjct: 677 ISQMMIFVNEA 687



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ Q  H+GH       DV++R  R  G +VL   G D  G    +
Sbjct: 28  KGKKNFYALDMFPYPSGQGLHVGHPEGYTATDVVSRMKRAQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTLKNIATFKRQIQELGFSYDWDREINTTDPNYYKWTQWIFTKLVEKGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|254785207|ref|YP_003072635.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511519|sp|C5BQX2|SYI_TERTT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|237684439|gb|ACR11703.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 934

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PADL++ G D  R  F +    A  ++   P  K+V +HGF +   G+K+SKS+GN + 
Sbjct: 552 YPADLYLEGSDQHRGWFQSSLKTAIAINGTAPY-KQVLTHGFTVDANGKKMSKSIGNTVS 610

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +V+ E+G D LR ++ 
Sbjct: 611 PQKVMNELGADVLRLWVA 628



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           REK  +     Y N + HIGHA   I+ D++ +   L G D  +  G D HG      + 
Sbjct: 48  REKFILHDGPPYANGEIHIGHAVNKILKDIIVKAKTLSGFDAPYIPGWDCHGLPIEHNVE 107

Query: 60  KAAQNAGV 67
           K    AGV
Sbjct: 108 KKVGKAGV 115


>gi|238650890|ref|YP_002916746.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511551|sp|C4K297|SYL_RICPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238624988|gb|ACR47694.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 835

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N +N +     +  SYD
Sbjct: 86  KNNSHPKKWTYSNIKNMKKQLKSMGFSYD 114


>gi|237734721|ref|ZP_04565202.1| isoleucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382049|gb|EEO32140.1| isoleucyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 909

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++   TG +      +   +P DL+  G D  R  F++            
Sbjct: 523 IMDVWFDSGSSH---TGCMI----ERGYRYPVDLYFEGSDQYRGWFNSSLIVGTAAHGCA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K V SHGF+L  KG K+SKSLGN +DPI+++ + G D +R
Sbjct: 576 PY-KTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVNQYGADIVR 617



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E         Y N   H+GH    +I DV+ R++ ++G    +  G D HG  I  A
Sbjct: 45  KGKEDFVFHDGPPYANGNMHMGHMLNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD 85
            Q  GV  K     ++  FR+  D
Sbjct: 105 IQKLGVNRK---KMSTAAFREKCD 125


>gi|77359977|ref|YP_339552.1| leucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123757688|sp|Q3IJ93|SYL_PSEHT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76874888|emb|CAI86109.1| leucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 862

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 2/145 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLKGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRTQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG 144
           YK   +  +   D+    +++V  G
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG 174


>gi|171920908|ref|ZP_02932059.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178931|ref|ZP_02964692.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024125|ref|ZP_02996861.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518253|ref|ZP_03003782.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524387|ref|ZP_03004413.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273760|ref|ZP_03206294.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554454|ref|YP_002284847.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550591|ref|ZP_03771540.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551525|ref|ZP_03772471.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903125|gb|EDT49414.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209194|gb|EDU06237.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019182|gb|EDU57222.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998148|gb|EDU67245.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659998|gb|EDX53378.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249515|gb|EDY74297.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541955|gb|ACI60184.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379340|gb|EEH01705.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379745|gb|EEH02107.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 900

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 22/191 (11%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           K LS+  KTF    K  D    IM VW D+ ++Y     Y + P       +PAD+++ G
Sbjct: 509 KYLSMKNKTF---YKEKD----IMDVWFDSGSSYNVLQHY-NLP-------YPADVYLEG 553

Query: 265 KDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVG 321
            D  R  F++      +L+   P  K + +HG +L  +G K+SKS GNV+DP++V +  G
Sbjct: 554 YDQYRGWFNSSLITGTILNNKAPY-KYLVAHGMVLDGEGYKMSKSKGNVVDPLDVCKVYG 612

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR ++        D    ++ LK+  NA++   I N + +    IL D++  +    
Sbjct: 613 ADVLRLWIANS-DYQNDTRISEEILKQ--NAEIYRRIRNTLFKYSLSILNDFEPSVDFSF 669

Query: 382 AFTESDESILS 392
              + D+ +L+
Sbjct: 670 DVRQEDQFVLN 680


>gi|154498312|ref|ZP_02036690.1| hypothetical protein BACCAP_02301 [Bacteroides capillosus ATCC
           29799]
 gi|150272623|gb|EDM99801.1| hypothetical protein BACCAP_02301 [Bacteroides capillosus ATCC
           29799]
          Length = 817

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       DV+AR  R+DG +VLF  G D  G      
Sbjct: 38  DKPKFYGLVEFPYPSGQGLHVGHTRPYTAMDVVARKRRMDGYNVLFPMGYDAFGLPTENY 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +        N  NF     +L  S+  D  I TT+  ++   + ++ ++  KG  
Sbjct: 98  AIKNHIHPAKVTHDNIENFTKQLHMLGYSFDWDRVINTTDPSYYKWTQWIFLQLWKKGLA 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YK      +    +    ++EV  G          +PV   E+  +  +++ Y  +L+
Sbjct: 158 YKSTMPVNWCTSCKCVLANEEVVDGV----CERCGSPVIRKEKSQWMLKITEYAQRLI 211



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKIS 304
           ++W P D +  G +    H +Y   W  FL    +   K+ +    SHG IL +G EK+S
Sbjct: 535 EYWSPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYQKRTSHGMILGEGGEKMS 594

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLV 330
           KS GNV++P +V+ + G D +R +++
Sbjct: 595 KSRGNVVNPNDVVAQYGADTMRTYIM 620


>gi|223648004|gb|ACN10760.1| Probable leucyl-tRNA synthetase, mitochondrial precursor [Salmo
           salar]
          Length = 912

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+ +   YP+ + H+GH     I+D +  F R+ G  VL   G D  G     AA 
Sbjct: 89  RKKFYVLSMFPYPSGRLHMGHVRVYTISDTIGHFQRMRGHQVLNPMGWDAFGLPAENAAI 148

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +   N ++ R+  D L +  ++D  + T    ++   + L+ K+ + G  Y+
Sbjct: 149 ERGLDPEEWTKSNIQSMREQLDSLGLCFNWDKEVTTCLPDYYRWTQWLFVKLFNAGLAYQ 208



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 29/197 (14%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P +V S   +    EK+SKS  N +DP EV+++ G+D +R +++      +D  +D    
Sbjct: 633 PVQVGSKAGLQVTWEKMSKSKHNGLDPQEVVQQYGIDTVRLYVLYAAPPEQDILWD---- 688

Query: 347 KKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              V  D   G+    SR   ++ K      DG +P P      +++          + R
Sbjct: 689 ---VKTDALPGVLRWQSRLWGLVTKLRSARQDGDVPNPSLLKRKEQA----------DAR 735

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDA--QKPWELKKTNPDRASTVLYVTV---EVIRQ 457
           +  +N+  + A+ QV    +E D   +A   +   L  T  + +S VL  +V   E +  
Sbjct: 736 KIWENK--NFAVEQVTGHFTE-DFLLNAAISRLMGLTNTLSNVSSDVLQHSVEFEEALAT 792

Query: 458 LAILLQAFVPKLANKIF 474
           L ++     P LA++++
Sbjct: 793 LCVMTAPMAPHLASELW 809


>gi|74193383|dbj|BAE20651.1| unnamed protein product [Mus musculus]
          Length = 626

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199


>gi|14285783|sp|Q9RSF0|SYL_DEIRA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 823

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS----HGFILHK-G 300
           D SKA   P DL+  G +    H +Y   W   +    L    + F+     G +L + G
Sbjct: 529 DPSKAGLLPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMVLGEDG 588

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           EK+SKS GNV+DP +++ E G D +R FL+        G +D  G+
Sbjct: 589 EKMSKSRGNVVDPDDLVREYGADTVRAFLMFIAPWELGGPWDPQGI 634



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 16/182 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF    D  G     AA  
Sbjct: 46  EKFYALTMFPYPSGNLHIGHWYANVAPDARARWLRMRGYNVLFPMAFDAFGLPAENAAIK 105

Query: 63  --QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              N    T   +++ +  F  M  ++D S      T +  ++   +  + +   +G  Y
Sbjct: 106 NNTNPATWTYANIERMTGQFSRMGTMIDWSRK--FATCDPEYYRWNQWFFIEFWKRGLAY 163

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177
            KG    W   +D+    +++V  G   +   A  + N  QW      + +++ Y ++LL
Sbjct: 164 KKGGLVNWCP-KDQTVLANEQVVNGHCERCGTAVERRNLSQW------YLKITDYAEELL 216

Query: 178 SY 179
            +
Sbjct: 217 DF 218


>gi|320169068|gb|EFW45967.1| leucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 905

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 9/192 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI     YP+   H+GH     ++D LARFH ++G  VL   G D  G     AA   
Sbjct: 100 KRYILAMFPYPSGHLHMGHVRVYTLSDCLARFHAMNGRQVLHPMGWDAFGLPAENAAIER 159

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-KG 122
           GV    +  +N    R     L +++D    + T    ++   + ++ ++   G  Y K 
Sbjct: 160 GVAPGEWTIKNIEYMRKQLQRLGMAFDWSKEVTTCAPDYYRWTQWIFLRLLKAGLAYRKN 219

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE- 181
               W  + D+    +++V +  +G+ + +     Q +  + +FF++SA+ ++LL   + 
Sbjct: 220 AVVNWDPV-DQTVLANEQVDE--NGRSWRSGAVVEQKLLNQ-WFFKISAFSNELLEGLDQ 275

Query: 182 -SHPEFILPIER 192
            + PE +  ++R
Sbjct: 276 LAWPESVKQMQR 287


>gi|255348381|ref|ZP_05380388.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502922|ref|ZP_05381312.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506591|ref|ZP_05382230.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525064|emb|CBJ14534.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis Sweden2]
 gi|296438322|gb|ADH20475.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 1036

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|160888060|ref|ZP_02069063.1| hypothetical protein BACUNI_00468 [Bacteroides uniformis ATCC 8492]
 gi|156862371|gb|EDO55802.1| hypothetical protein BACUNI_00468 [Bacteroides uniformis ATCC 8492]
          Length = 945

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCEPEYYHWTQWAFQKM 142


>gi|109730205|gb|AAI12413.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199


>gi|194333348|ref|YP_002015208.1| leucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|229559999|sp|B4S5G4|SYL_PROA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194311166|gb|ACF45561.1| leucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 806

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 26/190 (13%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K ++W   DL++ G +    H +Y   W   L     +S   P  +K+F+ G IL +
Sbjct: 514 DPDKERYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVSTKEPF-QKLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V++  G DA+R +         + F       K  N +   GI
Sbjct: 573 DNEKMSKSRGNVIPADHVMQSYGADAVRLY---------EMFLGPLEQVKPWNTNGIEGI 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              +SR   ++  + +G    P   T++  D+++     + ++++ E+ ++   + A+A+
Sbjct: 624 SRFLSRVWRIVYPEQEG----PAMLTDTPLDDALTRRMHKTIKKVTEDTEHLKFNTAIAE 679

Query: 417 VISLVSEVDR 426
           ++  V+E+ +
Sbjct: 680 MMVFVNELHK 689



 Score = 43.9 bits (102), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGTGLHVGHLEGYTATDIIARYKRSRGFNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  +FR     +  SYD    I TT+  +    + ++ ++ DKG  
Sbjct: 89  AIKTGTHPTTTTQKNVSSFRQTLQNMGFSYDWSREINTTDPNYFRWTQWIFLQLLDKGLA 148

Query: 120 Y 120
           Y
Sbjct: 149 Y 149


>gi|322501259|emb|CBZ36338.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 967

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K GL D  ++  +F+       DP  ++  W  +      T G+  + D  K +F+P  L
Sbjct: 462 KFGLTDEQVAEASFE------QDPD-VLDTWFSSGLWPFATLGWPTDSDDMK-RFFPNSL 513

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
              G DIL F         L     LP K+VF H  +  K GEK+SKS GNVIDP+ VI 
Sbjct: 514 METGHDILFFWVARMVMLSLHFTNKLPYKEVFLHAMVRDKNGEKMSKSKGNVIDPLYVIH 573

Query: 319 EVGVDAL 325
            V +  L
Sbjct: 574 GVSLQTL 580



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D L RFHR+ G + L+  GTD           +AG+ T+V V++     
Sbjct: 53  HLGHALTGAVQDTLIRFHRMKGDNTLYLPGTD-----------HAGIATQVVVERRVMK- 100

Query: 81  RDMADVLDISYDDFIR 96
            +     D+  D+F++
Sbjct: 101 EEGKSRHDLGRDEFMK 116


>gi|297831470|ref|XP_002883617.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329457|gb|EFH59876.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 19/164 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +    L+  G+ D  +  KA F+PA +   G DIL     +W A
Sbjct: 493 LELSQDPD-VLDTWFSSGLFPLSVLGWPDETEDFKA-FYPASVLETGHDIL----FFWVA 546

Query: 278 FLL-------SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            ++         ++P  +KVF H  I    G K+SKSLGN IDP+EVI  V +  L   L
Sbjct: 547 RMVMLGMKVGGGDVPF-RKVFLHPMIRDAHGRKMSKSLGNGIDPLEVINGVTLAGLHARL 605

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  K+    K+G  K    D  NGI    + S+   L  Y
Sbjct: 606 EEGNLDPKELVVAKEGQVK----DFPNGIPECGADSLRFALVSY 645


>gi|146094104|ref|XP_001467163.1| valyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071527|emb|CAM70216.1| putative valyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 967

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K GL D  ++  +F+       DP  ++  W  +      T G+  + D  K +F+P  L
Sbjct: 462 KFGLTDEQVAEASFE------QDPD-VLDTWFSSGLWPFATLGWPTDSDDMK-RFFPNSL 513

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
              G DIL F         L     LP K+VF H  +  K GEK+SKS GNVIDP+ VI 
Sbjct: 514 METGHDILFFWVARMVMLSLHFTNKLPYKEVFLHAMVRDKNGEKMSKSKGNVIDPLYVIH 573

Query: 319 EVGVDAL 325
            V +  L
Sbjct: 574 GVSLQTL 580



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D L RFHR+ G + L+  GTD           +AG+ T+V V++     
Sbjct: 53  HLGHALTGAVQDTLIRFHRMKGDNTLYLPGTD-----------HAGIATQVVVERRVMK- 100

Query: 81  RDMADVLDISYDDFIR 96
            +     D+  D+F++
Sbjct: 101 EEGKSRHDLGRDEFMK 116


>gi|15676101|ref|NP_273232.1| valyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|12585348|sp|Q9K1H7|SYV_NEIMB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|7225392|gb|AAF40631.1| valyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316985697|gb|EFV64643.1| valyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325141187|gb|EGC63687.1| valyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199387|gb|ADY94842.1| valyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 945

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ +G++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIGLEKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|307128524|ref|YP_003880554.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482986|gb|ADM89856.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 1128

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 252 KAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           K KF+PAD    G D  R  F  ++  + +L  ++   K V S+G +L  KG+K+SKS G
Sbjct: 625 KKKFFPADFICEGVDQTRGWFFTLHTISCILFNSISF-KNVISNGLVLDKKGKKMSKSRG 683

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           N I+P E+I++ G D +R++ +
Sbjct: 684 NTINPFEIIKKYGPDTIRWYFI 705


>gi|240168767|ref|ZP_04747426.1| leucyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 1002

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+HR+ G +VL   G D  G    + A 
Sbjct: 100 DKLFVQDMFPYPSGEGLHVGHPLGYIATDVFARYHRMKGNNVLHALGFDSFGLPAEQYAV 159

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 160 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 188


>gi|237749492|ref|ZP_04579972.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380854|gb|EEO30945.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 880

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 12/181 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA 
Sbjct: 35  KGKFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAM 94

Query: 64  NAGVTTKVFVDQNSRNFR-DMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  + +  MA + L I +   +   +  ++   + ++ K+ +KG IY+
Sbjct: 95  AHGIPPAEWTYSNITHMKGQMASMGLAIDWSREMTACKPDYYKWNQWMFLKMLEKGIIYQ 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P+       Y+ R++ Y ++L  
Sbjct: 155 KTGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYARITDYAEELRD 207

Query: 179 Y 179
           Y
Sbjct: 208 Y 208


>gi|48478263|ref|YP_023969.1| leucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430911|gb|AAT43776.1| leucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 891

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 32/176 (18%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-- 58
           + ER K +++    Y N   H+GH     + D++AR+ RL+G +VLF  G  E G  I  
Sbjct: 23  IDERPKFFVTVPWPYTNGSLHVGHGRTYTLGDIVARYKRLEGYNVLFPMGFHESGTPILA 82

Query: 59  --AKAAQNAGVTTKVF------------VDQNSRNFRDMADVLDISYDDFIR-------- 96
              +  +N   T K++            +D+   +F++  ++ +   D  I+        
Sbjct: 83  FSERLRENDPETIKLYRSYLEEYENKENIDKLIESFKEPENIANYFADKIIKDFTSLGYS 142

Query: 97  --------TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                   + +  + +  +  + K+ +   I +G Y   YS++DE    +D++  G
Sbjct: 143 IDWTRRFTSADPDYQEIVKWQFNKLKELKLIKQGNYPILYSVKDENAVGEDDIKDG 198



 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           PK +   G ++  G KISKS GNVI  +++ E+   D  R F    +A G D
Sbjct: 590 PKGLMISGLVISNGAKISKSKGNVISLLKIKEKYSADIYRLF----VAVGAD 637


>gi|89256533|ref|YP_513895.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314961|ref|YP_763684.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502647|ref|YP_001428712.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010655|ref|ZP_02275586.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367858|ref|ZP_04983878.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|254369479|ref|ZP_04985491.1| hypothetical protein FTAG_00467 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|122325026|sp|Q0BLI7|SYL_FRATO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123094508|sp|Q2A307|SYL_FRATH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231607|sp|A7NCQ3|SYL_FRATF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89144364|emb|CAJ79651.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129860|gb|ABI83047.1| leucine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253668|gb|EBA52762.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253250|gb|ABU61756.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122429|gb|EDO66569.1| hypothetical protein FTAG_00467 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 813

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA 
Sbjct: 31  KEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
               +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y 
Sbjct: 91  KHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  V    DG+ + +    V+  E   +F +++ Y D+LL
Sbjct: 151 KNSVVNWDPVDQTVLANEQVV----DGRGWRSGA-LVEKKEIPQWFLKITDYADELL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L+ ++ P  K + + G +L  G K
Sbjct: 517 EANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GN++DP E+I++ G D +R F
Sbjct: 576 MSKSKGNIVDPQELIDKYGADTVRLF 601


>gi|15807168|ref|NP_295897.1| leucyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459971|gb|AAF11720.1|AE002050_6 leucyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 874

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS----HGFILHK-G 300
           D SKA   P DL+  G +    H +Y   W   +    L    + F+     G +L + G
Sbjct: 580 DPSKAGLLPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMVLGEDG 639

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           EK+SKS GNV+DP +++ E G D +R FL+        G +D  G+
Sbjct: 640 EKMSKSRGNVVDPDDLVREYGADTVRAFLMFIAPWELGGPWDPQGI 685



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 16/182 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF    D  G     AA  
Sbjct: 97  EKFYALTMFPYPSGNLHIGHWYANVAPDARARWLRMRGYNVLFPMAFDAFGLPAENAAIK 156

Query: 63  --QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              N    T   +++ +  F  M  ++D S      T +  ++   +  + +   +G  Y
Sbjct: 157 NNTNPATWTYANIERMTGQFSRMGTMIDWSRK--FATCDPEYYRWNQWFFIEFWKRGLAY 214

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLL 177
            KG    W   +D+    +++V  G   +   A  + N  QW      + +++ Y ++LL
Sbjct: 215 KKGGLVNWCP-KDQTVLANEQVVNGHCERCGTAVERRNLSQW------YLKITDYAEELL 267

Query: 178 SY 179
            +
Sbjct: 268 DF 269


>gi|317478093|ref|ZP_07937268.1| leucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905691|gb|EFV27470.1| leucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 945

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCEPEYYHWTQWAFQKM 142


>gi|109730423|gb|AAI11893.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YK 121
           Y+
Sbjct: 198 YQ 199


>gi|161486832|ref|YP_505373.2| isoleucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 1096

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 9/95 (9%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILH-KGEKISKSLGNVI 311
           PAD   I + I +    ++  F+LS  +    P  +    HG IL  +G+K+SK L N +
Sbjct: 582 PADF--ITEYIAQTRGWFYTLFVLSTGIFDKHPF-ESCICHGVILDIQGQKLSKRLNNYL 638

Query: 312 DPIEVIEEVGVDALRYFLV-REIACGKDGFYDKDG 345
           DP+EV E  G D+LR+ L+   ++ G D   D+DG
Sbjct: 639 DPMEVFERFGADSLRFMLLSSSVSTGGDLLLDQDG 673


>gi|114777695|ref|ZP_01452655.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
 gi|114551911|gb|EAU54445.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
          Length = 936

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 25/178 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +       P  K V +HGF++ K G K+SKS GNVI P
Sbjct: 584 PADLYLEGSDQHRGWFQSSLLESVGTRGRAPF-KGVLTHGFVVDKNGNKMSKSKGNVIAP 642

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMIL 370
            ++I+++G D LR ++           Y  D    R++ D+   +     R   ++  +L
Sbjct: 643 QKIIQQMGADILRLWIASSD-------YSAD---IRISDDIIKQLSEAYRRIRNTIRFLL 692

Query: 371 KDYDGMIPTPGAFTESDESI--------LSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + DG  P   A   S+ +         LS   R +    E+ Q   IH+ +    S+
Sbjct: 693 GNLDGFDPAHDAVALSERTPLDQWVMHRLSRLERHVHACNESYQFHRIHQEIHNFCSV 750



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+  K  +     Y N   HIGHA   ++ D++ R   + G D  +  G D HG  I
Sbjct: 62  KDAPKFILHDGPPYANGSIHIGHALNKVLKDIVIRSRSMLGFDAPYVPGWDCHGLPI 118


>gi|17065234|gb|AAL32771.1| similar to valyl tRNA synthetase [Arabidopsis thaliana]
 gi|38564252|gb|AAR23705.1| At1g14610 [Arabidopsis thaliana]
          Length = 1064

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 16/157 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    W A ++  
Sbjct: 572 DPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFF----WVARMVMM 625

Query: 283 NLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L       KV+ H  I    G K+SKSLGNVIDP+EVI  V ++ L   L       
Sbjct: 626 GMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDP 685

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           K+    K+G  K    D  NGI    + ++   L  Y
Sbjct: 686 KEVIVAKEGQVK----DFPNGIPECGTDALRFALVSY 718



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 140 HIGHALTSAIEDTIIRWKRMSGYNALWVPGVD-----------HAGIATQVVVEKKIMRD 188

Query: 81  RDMADVLDISYDDFIRTTEK 100
           R M    D+  ++F++   K
Sbjct: 189 RGMTR-HDVGREEFVKEVWK 207


>gi|260654939|ref|ZP_05860427.1| valine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630254|gb|EEX48448.1| valine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 891

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 51/312 (16%)

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDA 234
           G++D  +SR+ + WG +IP               DP              + ++  W  +
Sbjct: 404 GVRDWCISRQLW-WGHRIPAWTCGDCGHLTVSETDPTVCPKCGSHHLHQDEDVLDTWFSS 462

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP------K 288
                +T G+ ++    K +++P  + V   DI+     +W + ++   L         K
Sbjct: 463 ALWPFSTLGWPEDTKELK-RYYPTSVLVTAFDII----FFWVSRMIMMGLEFMDGREPFK 517

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V+ H  +  + G+K+SKS GN IDP+++I + G DALR+ +      G+D    +  ++
Sbjct: 518 DVYIHALVRDEHGQKMSKSKGNGIDPLDMIGKFGADALRFTVAYLTVQGRDILLGESRIE 577

Query: 348 --KRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIREN 404
             KR    L N      SR   M L D D   +P        D  +LS  ++V + + E 
Sbjct: 578 TCKRFINKLWN-----ASRFALMNLGDEDCEGLPQLSKMRLHDRWLLSRLAQVEKSVAEL 632

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M    +  A   +   V     D Y +  KP         R+     V     + +  LL
Sbjct: 633 MDEYDVGEAARMIYDFVWADLCDWYIEMAKPALYGDEGDGRSKASRQVLNRAFKDVLRLL 692

Query: 463 QAFVPKLANKIF 474
             F P +  +++
Sbjct: 693 HPFTPFVTEELW 704



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 24/142 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTKVFVDQN 76
           H+GHAY+  + DVL R+ R  G +VL+  GTD  G      + +A    G+  +   D  
Sbjct: 57  HVGHAYDHTLQDVLCRYKRARGYNVLWLPGTDHAGIATQNVVERALAKQGLKRQ---DLG 113

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTC-----------------RILWKKISDKGDI 119
              F +        Y   I +  KR  D+C                 R ++ ++ +KG I
Sbjct: 114 REAFIEKVWEWKKEYGGRIVSQMKRLGDSCDWDRERFTMDEGLSKAVRAVFARLYEKGLI 173

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           Y+G Y   +  R     +D EV
Sbjct: 174 YRGKYIVNWCPRCHTALSDIEV 195


>gi|261602487|gb|ACX92090.1| valyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 816

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 473 VWIDSSVTVLYLTKFYEDKNVFNRTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNVPFT 531

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +   +   G ++SKS GNV+ P++ + + G DA+R  L+
Sbjct: 532 TVLVNGQVLGPDGTRMSKSKGNVVSPLDRVNDFGADAIRMALL 574



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 52  RFVIDTPPPFTSGELHMGHAYWVTIADTIGRFKRLEGYNVLLPQGWDTQG 101


>gi|224369583|ref|YP_002603747.1| IleS [Desulfobacterium autotrophicum HRM2]
 gi|223692300|gb|ACN15583.1| IleS [Desulfobacterium autotrophicum HRM2]
          Length = 936

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++      L+  +G +    PADL++ G D  R  FH+    A   +   
Sbjct: 532 ILDVWFDSGVSH---AAVLEEREGLER---PADLYLEGSDQHRGWFHSSLLTAVGRTGKA 585

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++  +G+K+SKS+GNV+ P ++I+  G D LR ++ 
Sbjct: 586 PY-KSVLTHGFVVDSQGKKMSKSVGNVVAPEKIIKAHGADILRLWVA 631



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K + K  +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I   
Sbjct: 45  KGKPKFILHDGPPYANGHLHIGHAINKILKDIIIRSKQMAGFDAPYVPGWDCHGLPIEHN 104

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
              K        T V V Q  R +      +DI  ++F R
Sbjct: 105 VDKKLGSKKADMTPVQVRQACREY--AKGFVDIQREEFKR 142


>gi|67922684|ref|ZP_00516188.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
 gi|67855466|gb|EAM50721.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
          Length = 853

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA
Sbjct: 31  DKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            +  +    +  QN    R     L +S D
Sbjct: 91  IDRNIPPADWTKQNIAQMRQQLQTLGLSID 120


>gi|317496755|ref|ZP_07955085.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895767|gb|EFV17919.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 803

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 50/250 (20%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPK 288
           Y+DN +  +        K+ P D+++ G +    H +Y   +  FL    +     P   
Sbjct: 507 YIDNKNNEELVSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGVIDFDEPF-H 565

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K+F+ G I  K G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+ 
Sbjct: 566 KLFNQGMITGKNGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDESGI- 624

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                   +G+   ++R   +++   D  +       E+D+ +L V  +++ +I   + N
Sbjct: 625 --------DGVHRFLTRFYKLVMDQKDKGV-------EADKELLKVRHKLIYDITTRLNN 669

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                +L  V+S   E      A      KK+  D+         E +    +LL  F P
Sbjct: 670 ----FSLNTVVSGFMEYTNTLTAM----AKKSGVDK---------ETLETAIVLLAPFAP 712

Query: 468 KLANKIFDIL 477
            +A ++++ +
Sbjct: 713 HIAEELWEAM 722



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKLLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +N +   + +   YD D  + TT+   +   + ++ K+  KG  
Sbjct: 89  AIKMGTHPRISTEANIKNIKRQINEISAIYDWDMEVNTTDPEFYKWTQWIFVKMFKKGLA 148

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E   N      GAD      + N  QWM       +++AY 
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGKCERCGAD----VTKKNLRQWM------LKITAYA 198

Query: 174 DKLLS 178
           D+LL+
Sbjct: 199 DRLLA 203


>gi|89098730|ref|ZP_01171612.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086692|gb|EAR65811.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 923

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      L+  D  +    PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSH---QAVLEERDDLQR---PADLYLEGSDQYRGWFNSSLSTSVAVTGKA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF L  +G K+SKS+GNV+ P +V+ ++G D LR ++ 
Sbjct: 576 PY-KGVLSHGFALDGEGRKMSKSIGNVVVPAKVMNQLGADILRLWVA 621



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 3/100 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPMFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFHAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
             N GV  K   +     FR + +       D  R+  KR
Sbjct: 105 LTNKGVKRK---EMTVAEFRKLCEEYAYEQVDSQRSQFKR 141


>gi|116747573|ref|YP_844260.1| isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696637|gb|ABK15825.1| Isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 928

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A       P  K V +HGF++  +G K+SKSLGNVI P
Sbjct: 555 PADLYLEGSDQHRGWFHSSLLTAVGTRNAAPY-KSVLTHGFVVDGQGYKMSKSLGNVIAP 613

Query: 314 IEVIEEVGVDALRYFLVRE 332
            E+I + G + LR ++  E
Sbjct: 614 EEIIRQYGAEVLRLWVSAE 632


>gi|297748150|gb|ADI50696.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis D-EC]
 gi|297749030|gb|ADI51708.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis D-LC]
          Length = 1041

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 516 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 572

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 573 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 632

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 633 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDRWILSSLYS 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 690 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 746

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 747 EVLVVFSKVIAPFIPFIAEDMYQQL 771


>gi|270295093|ref|ZP_06201294.1| leucyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274340|gb|EFA20201.1| leucyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 945

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCEPEYYHWTQWAFQKM 142


>gi|222151014|ref|YP_002560167.1| Ile-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782419|sp|B9EB60|SYI_MACCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222120136|dbj|BAH17471.1| Ile-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 914

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLEARPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGK 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KK+ SHGF++  +G K+SKSLGN + P +V++++G D +R +++
Sbjct: 577 SPY-KKLLSHGFVMDGQGRKMSKSLGNTVLPEKVVKQMGADIIRLWVM 623



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 22/145 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   II D++ R+  ++G    +  G D HG  I  A    GV  K    
Sbjct: 58  YANGQIHMGHALNKIIKDMIMRYKAMNGYYAPYVPGWDTHGLPIETALTKKGVDRK---S 114

Query: 75  QNSRNFRDMA-----DVLDISYDDF-------------IRTTEKRHHDTCRILWKKISDK 116
            +   FR++      + +++   DF             I   EK   +  R L+  ++ K
Sbjct: 115 MSEAEFRELCRAYALEQIELQKADFKRLGVNGDWENPYITLQEKFEAEQIR-LFGDMAAK 173

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEV 141
           G IYKG    ++S   E+   + E+
Sbjct: 174 GYIYKGKKPVYWSPSSESSLAEAEI 198


>gi|154495149|ref|ZP_02034154.1| hypothetical protein PARMER_04197 [Parabacteroides merdae ATCC
           43184]
 gi|154085699|gb|EDN84744.1| hypothetical protein PARMER_04197 [Parabacteroides merdae ATCC
           43184]
          Length = 1141

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 639 KVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVVSNGLVLDKNGNKMSKRLGNA 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 698 VDPFATIEQYGSDPLRWYMITNASPWDNIKFDIDGIEE 735


>gi|15223829|ref|NP_172913.1| TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide
           binding / valine-tRNA ligase [Arabidopsis thaliana]
 gi|21542452|sp|P93736|SYV_ARATH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|332191069|gb|AEE29190.1| Valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1108

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 16/157 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    W A ++  
Sbjct: 616 DPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFF----WVARMVMM 669

Query: 283 NLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L       KV+ H  I    G K+SKSLGNVIDP+EVI  V ++ L   L       
Sbjct: 670 GMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDP 729

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           K+    K+G  K    D  NGI    + ++   L  Y
Sbjct: 730 KEVIVAKEGQVK----DFPNGIPECGTDALRFALVSY 762



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 184 HIGHALTSAIEDTIIRWKRMSGYNALWVPGVD-----------HAGIATQVVVEKKIMRD 232

Query: 81  RDMADVLDISYDDFIRTTEK 100
           R M    D+  ++F++   K
Sbjct: 233 RGMTR-HDVGREEFVKEVWK 251


>gi|146279165|ref|YP_001169324.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166231637|sp|A4WXA5|SYL_RHOS5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145557406|gb|ABP72019.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 873

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGYSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N  + R     L +S D   +F  T +  ++   + ++  + + G IY
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQAMFIDMLEAGLIY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  + D     +++V  G  G   NA   PV+  E   +FFR+S Y  +LL
Sbjct: 150 RKNAVVNWDPV-DMTVLANEQVIDG-KGWRSNA---PVERRELTQWFFRISDYAGELL 202



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/176 (19%), Positives = 75/176 (42%), Gaps = 30/176 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I + G D  R+F++ +    +D  +   G +              
Sbjct: 645 KMSKSKKNVVDPMNIISQFGADTARWFVMSDSPPERDVEWTASGAEAAF----------- 693

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             + +  + +  D +    GA T  D ++    ++ + E+ + ++    ++A+A++    
Sbjct: 694 --KHLGRVWRLADEIARAEGAPTAEDVALDRATAKAIAEVTQGIEGFAFNKAIAKLYEFT 751

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + R        E K+                +R +A L+   VP LA +++ +L
Sbjct: 752 NTLSRSGAGA---EAKR--------------RAMRTMAQLMSPMVPHLAEEVWSML 790


>gi|317123001|ref|YP_004103004.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592981|gb|ADU52277.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 897

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 6/171 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+ + H+GH     I D  ARF R+ G +VL+  G D  G     AA 
Sbjct: 34  RPKFYCLEMYPYPSGKLHMGHVRNYSIGDATARFLRMRGYNVLYPMGWDSFGLPAENAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    R+    L +SYD    I  +   ++   + L+  +  +G + +
Sbjct: 94  ANQTHPAEWTYANIAAMREQMQRLGLSYDWRREIACSHPGYYKWTQWLFLLLYKRGLVER 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                 +  R      +++V  GA  +       PV+  E E +FFR++AY
Sbjct: 154 KKAPVNWCPRCATVLANEQVEDGACWRC----GTPVEKRELEQWFFRITAY 200



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 17/144 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL-----SANLPLP---KKVFSHGFILHK 299
           D  K  +W P D ++ G +    H +Y   F+         +P P   +++ + G ++  
Sbjct: 522 DREKVFYWLPVDQYIGGIEHAVLHLLY-SRFITKVLYDEGLVPSPEPFRRLLTQGMVIKD 580

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDGFYDKDGLKKRVNAD 353
           G K+SKS GNV+ P +++EE G DA R F++      R++   + G        +RV   
Sbjct: 581 GAKMSKSKGNVVSPEDILEEYGADATRLFILFAAPPERDLEWSEHGIEGASRFVQRV-WR 639

Query: 354 LANGIGNLVSRSVSMILKDYDGMI 377
           L  G    +  +   +    DG +
Sbjct: 640 LVTGCAEAIRGAAGQVAAARDGAV 663


>gi|157803821|ref|YP_001492370.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166231639|sp|A8EZ02|SYL_RICCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157785084|gb|ABV73585.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 834

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMNMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N  N +     +  +YD
Sbjct: 86  KNNVHPKEWTYSNVDNMQQQLKSMGFAYD 114


>gi|125624825|ref|YP_001033308.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493633|emb|CAL98620.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071624|gb|ADJ61024.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 932

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 31/274 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  D      +PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSW---NGVLNERDYLS---FPADLYLEGSDQYRGWFNSSITTSVAVNGIA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF+L  KG K+SKS+GN I P +V ++ G D LR + V  I    D     
Sbjct: 576 PY-KAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLW-VASIDTESDVRVSM 633

Query: 344 DGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVL 398
           D L +   V   + N +  L++ +     K+ DG+      F E    D+ +L   + ++
Sbjct: 634 DILSQVSEVYRKIRNTLRFLIANTSDFNPKE-DGI-----DFAELRPVDKYMLVKFNELV 687

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRAS--TVLYVTV 452
           ++IR+   N         +I+ ++      Y D  K   +     +P+R S  TV+YV  
Sbjct: 688 KQIRKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYV-- 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +++ L  +L   +P  A + +  L    EN  +
Sbjct: 746 -ILKDLVKVLVPILPHTAEETWTYLEHEPENFAY 778



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R+  + G    +  G D HG  I +    AG+  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +  + D  +D    T    +      ++ K+++KG 
Sbjct: 118 LDYLEECRKYAMKQVDMQRSDFKSLGVLAD--WDRPYLTLLPEYEAAQIRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGQKPIYWSPSSESSLAEAEI 198


>gi|119470026|ref|ZP_01612831.1| isoleucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446736|gb|EAW28009.1| isoleucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 942

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q  + VW D+  ++       D   G      PADL++ G D  R  F +    +  ++ 
Sbjct: 535 QDTLDVWFDSGVSHACVVDARDELVG------PADLYLEGSDQHRGWFMSSMMTSVAING 588

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + P  K+V +HGF +   G K+SKSLGNVI P  V+ ++G D LR ++ 
Sbjct: 589 HAPY-KQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVA 636


>gi|302036441|ref|YP_003796763.1| isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604505|emb|CBK40837.1| Isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 939

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 14/107 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I+ VW ++  +Y             K++ W PADL++ G D  R  FH+      +    
Sbjct: 547 ILDVWFESGVSYAAVL---------KSRQWYPADLYLEGSDQHRGWFHSALLAGVITDHR 597

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K V +HGF+L   G K+SKS GNV+ P +VI++ G + LR ++
Sbjct: 598 APY-KAVLTHGFVLDGAGRKMSKSAGNVVAPQDVIKQSGAEILRLWV 643


>gi|195402937|ref|XP_002060056.1| GJ15519 [Drosophila virilis]
 gi|194141854|gb|EDW58267.1| GJ15519 [Drosophila virilis]
          Length = 870

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+ +   YP+   H+GH     I+D +ARF R+ G +V    G D  G     AA   
Sbjct: 63  KYYVLSMFPYPSGNLHMGHVRVYTISDAVARFQRMCGKNVFQPIGWDSFGLPAENAANQR 122

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           GV    +  QN    +   + L  S+D
Sbjct: 123 GVAPADWTQQNIAQMKQQLERLGCSFD 149


>gi|190149313|ref|YP_001967838.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307262626|ref|ZP_07544256.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|254782357|sp|B3GZN4|SYI_ACTP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189914444|gb|ACE60696.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306872049|gb|EFN03763.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 938

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|157736663|ref|YP_001489346.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980074|sp|A8ERV3|SYL_ARCB4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157698517|gb|ABV66677.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 821

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK YI +   YP+ + H+GH     I D  AR  R    +VL   G D  G     A
Sbjct: 28  KTKEKKYILSMFPYPSGRIHMGHVRNYCIGDAFARHFRKSDFNVLHPIGWDSFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDK 116
           A    +  K +  +N    RD    L +S   F +  E    D     W+     K+ + 
Sbjct: 88  AIKHKLHPKKWTYENIDYMRDELKSLGLS---FSKNREFATSDELYTKWEQEFIIKMYEA 144

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G IY+   +  +   D+    ++++ +G     +      VQ  E  GY+  ++ Y  +L
Sbjct: 145 GIIYRKSATVNWCPHDQTVLANEQLEEGC---CWRCGTEVVQ-KEMPGYYIGITKYAQEL 200

Query: 177 L 177
           L
Sbjct: 201 L 201



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 24/171 (14%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KK+ + G +L  G K+SKS GNV+DP  +I++ G D  R F++      K+  ++   ++
Sbjct: 572 KKLLTQGMVLKDGAKMSKSKGNVVDPDLIIDKYGADTARLFILFAAPPTKELEWNDSAVE 631

Query: 348 ----------KRVNADLANGIGNLVSRSVSMILKD--------YDGMIPTPGAFTESD-- 387
                     +R      NG+ N  S   S + K+        Y+ ++ +   FT++   
Sbjct: 632 GAFRFIKKFFERAENVNQNGLDNFKSIDHSALSKEEKEARKKVYEALLKSNEVFTKTYTF 691

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            ++++ C   L      +Q Q      A+   +++ +         WEL K
Sbjct: 692 NTLIASCMEALNA----LQTQKNDSIWAEGYYILTNILEPIIPHACWELSK 738


>gi|331270551|ref|YP_004397043.1| isoleucyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329127101|gb|AEB77046.1| isoleucyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 1025

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 14/209 (6%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K+SKS GNV+DP +V+E  G DA R+      A      + +D +K+     L+  +
Sbjct: 574 KGLKMSKSKGNVVDPFDVLENEGADATRWHFYTASAPWLPTRFSEDDVKETQRKFLST-L 632

Query: 359 GNLVSRSVSMILKDYDGMIPT--PGAFTES--DESILSVCSRVLQEIRENMQNQLIHRAL 414
            N+ S  V  +  + D   PT      +E+  D+ I+S  + +++ I EN+ N  I  A 
Sbjct: 633 WNVYSFYV--LYAEIDKFNPTEYKDFVSENVMDKWIISKLNTLIKTIGENLDNYKITEAA 690

Query: 415 AQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLA 470
             +   V E+  ++   +  + W  K T+    +   Y T+ +V+  L  +   FVP ++
Sbjct: 691 LTLEDFVDELSNWYVRRNRSRFWSTKLTDDKIGA---YTTLHKVLTTLVKVAAPFVPFMS 747

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFML 499
            +I+  L V  +    +S+     P + L
Sbjct: 748 EEIYQNLVVNLDKEAVESVHLCTWPQYNL 776



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N +PH+GH    ++ D++ R+  + G  VL   G D HG
Sbjct: 38 NGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHG 76


>gi|282853270|ref|ZP_06262607.1| isoleucine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582723|gb|EFB88103.1| isoleucine--tRNA ligase [Propionibacterium acnes J139]
          Length = 1097

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 50/290 (17%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 547 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 605

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 606 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 664

Query: 330 ------VREIACGKDGFYDKDGLKKRVN-----------ADLANGIGNLVSRSVSMILKD 372
                 VR++            L  R N           AD A G G +V  +V    + 
Sbjct: 665 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQDDADPARGFGGVVPPAVDS--RG 722

Query: 373 YDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           + G++P   A T+    D  ++   + +++++ E + N    R    +   V E+  ++ 
Sbjct: 723 FGGVVPP--AVTQRHVLDRWLVGATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNWYV 780

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 781 RRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 826


>gi|300776381|ref|ZP_07086239.1| valine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501891|gb|EFK33031.1| valine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 879

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 30/247 (12%)

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL 297
           G LD  +     ++P    V G DI+ F    W A ++ A L     +P K V+  G + 
Sbjct: 481 GLLDPENKDINYYYPTSDLVTGPDIIFF----WVARMIMAGLEYRKEVPFKNVYFTGIVR 536

Query: 298 HKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K   K+SKSLGN  DP+E++++ G D +R  ++   A G D  +D+D + +  N     
Sbjct: 537 DKQRRKMSKSLGNSPDPLELMDKYGADGVRVGILLSSAAGNDLLFDEDLMLQGRN--FMT 594

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N   R ++M   +       P A T++   E   +  ++ + EI +  +   I  AL
Sbjct: 595 KIWNAF-RLINMWNHE-----DKPAAATDNQAIEWFENKLNKTIFEINDQFEKFRISDAL 648

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLA 470
             +  L+      +D    W L+   P+     +  V   T+    +L  LL  F+P L 
Sbjct: 649 HLIYKLI------WDDFCGWYLEAIKPNYGEGISKEVYNKTIYFFEELMKLLHPFMPFLT 702

Query: 471 NKIFDIL 477
            +++ ++
Sbjct: 703 EELWQMI 709


>gi|159042613|ref|YP_001531407.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082998|sp|A8LJY0|SYL_DINSH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157910373|gb|ABV91806.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 869

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA 
Sbjct: 41  KQKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKASCGFSVLHPMGWDAFGMPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N    R     L +S D   +F  T ++ ++   + ++    +KG +Y
Sbjct: 101 ATGGHPKDWTYANIAEMRAQMKPLGLSIDWSREFA-TCDEAYYGQQQSMFLDFLEKGLVY 159

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  +      N+  +    DG+ + +    V+  E   +FF++S + D LLS
Sbjct: 160 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAE-VERRELTQWFFKISDFADDLLS 213


>gi|160901434|ref|YP_001567016.1| leucyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687210|sp|A9C1G8|SYL_DELAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160367018|gb|ABX38631.1| leucyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 911

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G      
Sbjct: 30  QAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLP---- 85

Query: 62  AQNAGVTTKVFVDQNS--------RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           A+NA +  KV   Q +        +  + M   +D S +  I T +  ++   + L+ K+
Sbjct: 86  AENAALKNKVPPAQWTYDNIAYMKKQMQAMGLAIDWSRE--IATCDPDYYKWNQWLFLKM 143

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +KG  Y+      +   D+    +++V    DG+ +     PV+  E  GY+ +++ Y 
Sbjct: 144 LEKGIAYRKTQVVNWDPVDQTVLANEQVI---DGRGWRT-GAPVEKREIPGYYLKITDYA 199

Query: 174 DKLLSYYE 181
            +LL + +
Sbjct: 200 QELLDHVQ 207


>gi|315604607|ref|ZP_07879670.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313619|gb|EFU61673.1| leucine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 976

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R+  +I     YP+ +  H+GH    I  D LARF R+ G +VL+T G D  G    
Sbjct: 48  LASRDPYFILDMFPYPSGKGLHVGHPLGYIATDTLARFRRMRGDNVLYTMGYDAFGLPAE 107

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    V  +QN  N R     + +S+D
Sbjct: 108 QYAVQTGQHPAVTTNQNIANMRRQLRRMGLSHD 140


>gi|156740344|ref|YP_001430473.1| isoleucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231672|gb|ABU56455.1| isoleucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 1079

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 40/214 (18%)

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V   G IL  +G+K+SKS GNV+DP  V+ E G DALR++L      G       
Sbjct: 582 PAFKNVICLGHILDAEGQKMSKSRGNVVDPWTVMNEHGADALRWYLFTAAPPGS------ 635

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMIL-------------KDYDGMIPT---------PG 381
               +R +A        LV+ S+   L              + DG  PT         P 
Sbjct: 636 ---PRRFSA-------GLVAESLRKFLLTLWNTYAFFATYANLDGWTPTKDGVDQHLDPA 685

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                D   L+  + +++ + +  +   +  A   +   V E+  ++  +      K+  
Sbjct: 686 TLVPIDRWALARLNSLVRTVTDAFEAYDVTTAARAIEDFVDELSNWYVRRNRRRFWKSEH 745

Query: 442 DRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
           DR     Y T+   +  +A L   FVP +A  I+
Sbjct: 746 DRDKQAAYATLYTCLLTVAKLAAPFVPFVAEAIY 779


>gi|57239030|ref|YP_180166.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578971|ref|YP_197183.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819269|sp|Q5HBM8|SYL_EHRRW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57161109|emb|CAH58018.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417597|emb|CAI26801.1| Leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 830

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 41/87 (47%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y+     YP+   H+GH     I DV+AR+ R  GL V    G D  G     AA + 
Sbjct: 26  QCYVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGLHVFHPIGWDAFGLPAENAALSY 85

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
            ++ +V+  +N  N R     + +SY+
Sbjct: 86  NISPQVWTRKNIDNMRSQLKSIGLSYN 112


>gi|224023502|ref|ZP_03641868.1| hypothetical protein BACCOPRO_00204 [Bacteroides coprophilus DSM
           18228]
 gi|224016724|gb|EEF74736.1| hypothetical protein BACCOPRO_00204 [Bacteroides coprophilus DSM
           18228]
          Length = 944

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKI 113
            A   G    V    N   +R+  D +  S+  D  +RT E  ++   +  ++K+
Sbjct: 88  YAIQTGQHPAVTTAANIARYREQLDKIGFSFDWDREVRTCEPGYYHWTQWAFQKM 142



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 52/277 (18%)

Query: 214 FDWGIKIPDDP-QYIM----------YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           FD G+ I ++P Q ++          +V+    TN   + G  D  D +       D+++
Sbjct: 624 FDLGVSIKEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLGLKDQYDVTPLH---VDVNI 680

Query: 263 IGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +  D+L   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E+ G
Sbjct: 681 VSNDVLDVEAFKNWRPEYNNAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIVEKYG 737

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR + +      +   +D +G+         +G+   + +   +     D  +PT G
Sbjct: 738 ADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWGLFYDRQDNFLPTEG 788

Query: 382 AFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
             T+ + +S+  +  +V  +I     N  +   +  V  L S             LK  N
Sbjct: 789 EATKEELKSLHKLIKKVTCDIEVFSYNTSVSAFMICVNELTS-------------LKCRN 835

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D           V+  L +LL  F P LA ++++ L
Sbjct: 836 KD-----------VLSGLVVLLAPFAPHLAEELWEAL 861


>gi|190571143|ref|YP_001975501.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|238064874|sp|B3CLT1|SYL_WOLPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190357415|emb|CAQ54849.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 819

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I DV+AR+ R  G +VL   G D  G     AA++  +
Sbjct: 30  YVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPAENAARDNNI 89

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD 92
               +   N  N R     + +SY+
Sbjct: 90  NPAAWTQDNIDNMRTQLKSIGLSYN 114



 Score = 36.6 bits (83), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K EK+SKS  N +DP  +IE+ G D  R F++ +    KD  +  DG++
Sbjct: 583 KVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDGVE 631


>gi|229586699|ref|YP_002845200.1| leucyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511550|sp|C3PNE7|SYL_RICAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|228021749|gb|ACP53457.1| Leucyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 835

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAEHAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N +N +     +  SYD
Sbjct: 86  KNNSHPKKWTYSNIKNMKKQLKSMGFSYD 114


>gi|15897784|ref|NP_342389.1| valyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284175587|ref|ZP_06389556.1| valyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|74542081|sp|Q97ZK9|SYV_SULSO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13814075|gb|AAK41179.1| Valyl-tRNA synthetase (valS) [Sulfolobus solfataricus P2]
          Length = 842

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VWID+    L  T + ++ +     F PA L + G DI+R    Y  +   +L+ N+P  
Sbjct: 499 VWIDSSVTVLYLTKFYEDKNVFNRTF-PASLRLQGTDIIRTWLFYTFFRTLMLANNVPFT 557

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +   +   G ++SKS GNV+ P++ + + G DA+R  L+
Sbjct: 558 TVLVNGQVLGPDGTRMSKSKGNVVSPLDRVNDFGADAIRMALL 600



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G
Sbjct: 78  RFVIDTPPPFTSGELHMGHAYWVTIADTIGRFKRLEGYNVLLPQGWDTQG 127


>gi|134296685|ref|YP_001120420.1| isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166200199|sp|A4JH32|SYI_BURVG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134139842|gb|ABO55585.1| Isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 945

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDFAQHAVPV-DEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY +T 
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTQ 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A K+F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|319401064|gb|EFV89283.1| leucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 804

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++   G D LR + +          + + GL         +G  
Sbjct: 574 NEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGPLDAAIAWSEKGL---------DGSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ D + +         +D S+  V ++ ++++ E+      + A++Q++ 
Sbjct: 625 RFLDRVWRLIITDENSI--NKKIVDSNDHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMV 682

Query: 420 LVSEVDRYFDAQKPW 434
            ++E  +  +  KP+
Sbjct: 683 FINECYKTNEVYKPY 697



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ V    DG      H PV     + +  +++ Y D+LL
Sbjct: 150 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLL 202


>gi|298483218|ref|ZP_07001397.1| leucine--tRNA ligase [Bacteroides sp. D22]
 gi|298270535|gb|EFI12117.1| leucine--tRNA ligase [Bacteroides sp. D22]
          Length = 944

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   + +++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWVFQKM 142



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|94968356|ref|YP_590404.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550406|gb|ABF40330.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 856

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 10/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+   + YP+   H+GH     I D LARF  + G +VL   G D  G     AA 
Sbjct: 48  KKKFYVLEMLPYPSGALHMGHVRNYAIGDALARFMWMTGHNVLHPMGWDAFGLPAENAAI 107

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 + +   N    +     L  +YD    I T    ++   +  + K  +K   YK
Sbjct: 108 KNQRQPREWTLGNIEAMKKQMRRLGFAYDWSKEIATCLPDYYRWNQWFFIKFFEKNLAYK 167

Query: 122 -GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
                 W         N+  V    DG  +  +   V+  E E +FFR++ Y D+L   L
Sbjct: 168 RKSKVNWCPECATVLANEQVV----DGCCWRHETTRVEQRELEQWFFRITDYADELLRDL 223

Query: 178 SYYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 224 DQLEGWPEKVKTMQR 238



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 115/253 (45%), Gaps = 29/253 (11%)

Query: 236 TNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLP 287
           TN   TT  +D        +W P D ++ G +    H IY   W   +    L  N    
Sbjct: 538 TNPQLTTAPVDT---KTIDYWFPIDQYIGGVEHAILHLIYSRFWTKVMRDLGLVHNSEPV 594

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            ++F+ G ++  G K+SK+LGNV+ P ++I + G DA R + +      +D  +   G++
Sbjct: 595 TRLFTQGMVIKDGAKMSKNLGNVVAPDDMIAKYGADATRMYTLFAAPPDRDLDWQDAGVE 654

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQ 406
                    G+   ++R   +I ++   +   P  +T ++  +     +R L +  + + 
Sbjct: 655 ---------GVSRFLARVYRLIAQN-PIVHAGPAHYTLAELPANAKKIARKLHQTIKRIS 704

Query: 407 NQLIHRAL--AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           ++L  R      V +L+  V+  + A + +   K   +R      +  +V R++ +LLQ 
Sbjct: 705 DELGGRWHFNTCVAALMEFVNECYAAPELFANPKEGIERT-----LVADVQRKVTLLLQP 759

Query: 465 FVPKLANKIFDIL 477
           F P +A++++ +L
Sbjct: 760 FAPYVAHELWAML 772


>gi|242309306|ref|ZP_04808461.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524347|gb|EEQ64213.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 812

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 20/181 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I+D +AR +R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGNIHMGHVRNYCISDAIARNYRKQGFNVLHPIGWDAFGMPAENAAIKN 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------ISDKG 117
               K +   N  N ++    L  S+      ++ R   TC + + K        + +KG
Sbjct: 92  KTHPKQWTYANIENMKNQLYSLGFSF------SKTRELATCDLEYSKWEQSLFIDMWEKG 145

Query: 118 DIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            IY K  Y  W    D+    +++V    +G+ +      VQ  E   Y+ +++ Y ++L
Sbjct: 146 LIYRKKGYLNWCP-NDQTVLANEQV---IEGKCWRCDTQVVQ-KEMYQYYIKITDYAEEL 200

Query: 177 L 177
           L
Sbjct: 201 L 201



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------VREIACGKDGFYDK 343
           + + G +   G K+SKS GNV+DP E+IE+ G D  R F+      VRE+          
Sbjct: 566 LLTQGMVTKDGAKMSKSKGNVVDPQEIIEQYGADTARLFILFAAPPVRELEWNDSALEGA 625

Query: 344 DGLKKRVNADLANG 357
               KR++A + N 
Sbjct: 626 FRFIKRLSAKIENA 639


>gi|126459305|ref|YP_001055583.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166231634|sp|A3MU00|SYL_PYRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126249026|gb|ABO08117.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 946

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K +I+ A  YPN   HIGH    ++ADV+ARF R  G +VLF       G  I   A+
Sbjct: 33  RPKFFITAAYPYPNGTIHIGHGRTYLVADVMARFRRHLGYNVLFPMAFHYTGTPILTIAE 92

Query: 64  NAGVTTKVFVDQ 75
                 K  +++
Sbjct: 93  VIAAGDKAVIEE 104



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 27/226 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    GKD++  H  ++  F   A  P    P+++ ++G++L +GEK+SKS  NV+
Sbjct: 589 WYPLDSRNSGKDLIPNHLTFF-IFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVL 647

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + +   G D LR  L   IA   +   D    + R N+     I NLV R     ++
Sbjct: 648 PLDKAVALYGPDPLRATLA--IAAEVEQDLDFRDAEARRNSQQLMSIYNLVQRLAQSAVE 705

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
             +         T  D+ ++S  + VL+  RE  +   + +A  +++         ++A+
Sbjct: 706 REE---------TWLDKWLISEVAHVLERAREAYEKVRLRQAAVELL---------YNAE 747

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +    +  D+ S      VE  +   + L+  VP  A +++ IL
Sbjct: 748 AVFSQYLSMVDKPSK---SAVEAAKAWVVALEPIVPHFAEELWQIL 790


>gi|91774107|ref|YP_566799.1| valyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91713122|gb|ABE53049.1| Valyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 865

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AK 60
           + R +  I T   YP    HIG++      D +AR+ R+ G +V+F  G D HG     K
Sbjct: 32  ESRPQYIIDTPPPYPTGNFHIGNSLNWCYIDFVARYKRMQGFNVMFPQGWDCHGLPTEVK 91

Query: 61  AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKR 101
             +N G+T     +Q  R  FR M + L +   D +R T  R
Sbjct: 92  VEENHGITK----NQVPRTEFRQMCEELTVGNIDKMRKTMHR 129



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W+D+    L   G+L + +       P  L   G DI+R  + Y  + L S  L  
Sbjct: 445 VLDTWMDSSITALHVAGWLSDKEMRN----PTQLRPQGHDIIRTWSFY--SILRSMALTG 498

Query: 287 PK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            K    +  +G +L + G K+SKSLGNVI P EVI++   DA R +     + G D  +
Sbjct: 499 KKPWESILVNGMVLGEDGHKMSKSLGNVISPEEVIKDHSADAFRQWAAVGGSTGSDVMF 557


>gi|183600427|ref|ZP_02961920.1| hypothetical protein PROSTU_03998 [Providencia stuartii ATCC 25827]
 gi|188020223|gb|EDU58263.1| hypothetical protein PROSTU_03998 [Providencia stuartii ATCC 25827]
          Length = 964

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 119/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N +  K  F P D+ V G DI+ F    W A ++   +  
Sbjct: 485 VLDTWFSSGLWTFSTLGWPENTEALKT-FHPTDVLVSGFDIIFF----WIARMIMMTMHF 539

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I   +G+K+SKS GNVIDP+++I+ +              
Sbjct: 540 IKDENGVPQVPFKTVYMTGLIRDEEGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMM 599

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 600 QPQLAEKIAKRTRKEYPNGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 657

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  ++ D G      +F+ +D  I++  ++ ++  RE +       A   
Sbjct: 658 LWN-ASRFVLMNTENQDCGQNGGEMSFSLADRWIMAQFNQTIKAYREALDTHRYDIAAGI 716

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +A    +  +EV+  L  L    +P +   I+
Sbjct: 717 LYDFTWNEFCDWYLELSKP-AVHKGNEAQARAARFTLIEVLEALLRLAHPIIPFITETIW 775



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+ TGTD           +AG+ T++ V++
Sbjct: 62  HMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTD-----------HAGIATQMVVER 105


>gi|73542430|ref|YP_296950.1| isoleucyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|72119843|gb|AAZ62106.1| Isoleucyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 974

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 21/207 (10%)

Query: 230 VWIDALTNYLTTTGY-----LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           VW D+ T + T         L +P   +A    ADL++ G D  R  FH+    A +L  
Sbjct: 569 VWFDSGTTHWTVIRGSHRDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASMLYG 628

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K + +HGF +  +G K+SKS+GN + P ++  ++G + +R ++      G+    
Sbjct: 629 KPPY-KALLTHGFTVDGEGRKMSKSVGNTVSPQDIANKMGAEIIRLWVASTDYSGELSIS 687

Query: 342 DKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
           D + LK+ V +   + N +  L+S      L DYD     +P    + E D   +++  R
Sbjct: 688 D-EILKRVVESYRRIRNTLRFLLSN-----LSDYDHSKHALPA-SEWLEIDRYAVALTER 740

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE 423
           + +E+  +  +   H  +A++ +  SE
Sbjct: 741 LQKEVLSHYDSYEFHPVVAKLQTFCSE 767



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K  +K  +     Y N   HIGHA   ++ D++ +   L GLD ++  G D HG  I
Sbjct: 65  KGAKKFVLHDGPPYANGDIHIGHAVNKVLKDMIVKARGLSGLDAVYVPGWDCHGMPI 121


>gi|319900580|ref|YP_004160308.1| leucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415611|gb|ADV42722.1| leucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 945

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G   +V    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPEVTTKANINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142


>gi|297569024|ref|YP_003690368.1| valyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924939|gb|ADH85749.1| valyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 917

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 15/120 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P+ +K    F+P  + +   DIL F    W A ++   L
Sbjct: 464 VLDTWFSSALWPFSTLGW---PEKTKELQMFYPTSVLITSFDILFF----WVARMMMMGL 516

Query: 285 ----PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                +P + V+ H  +  K G+K+SKS GNV+DP+E++++ G DALR+ +    A G+D
Sbjct: 517 HFMDQVPFRDVYLHALVRDKHGKKMSKSKGNVLDPLELMDQYGTDALRFTMAAFAAQGRD 576



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G
Sbjct: 55  SIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAG 102


>gi|167383568|ref|XP_001736582.1| valyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165900944|gb|EDR27155.1| valyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 1048

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 20/164 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           I++  DP  ++  W  +     +  G+   P+ +K   K++P +L   G DI+ F    W
Sbjct: 567 IELKQDPD-VLDTWFSSGLFPFSVMGW---PEKTKDLEKYFPGELLETGNDIIFF----W 618

Query: 276 PAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++  +L L      K+V  H  +   +G K+SKSLGN+IDPI+VIE + +  L   L
Sbjct: 619 VARMVMMSLELMNCLPFKEVLFHSIVRDAQGRKMSKSLGNIIDPIDVIEGISLQGLNEKL 678

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  K+     +G KK    D  NGI    + ++   L  Y
Sbjct: 679 YTYNLPEKECILATEGQKK----DFPNGIEECGTDAMRFALLAY 718



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 13/66 (19%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN   + H+GHA    I D + R+HR+ G + L+  G D           +AG+ T
Sbjct: 127 VIPPPNVTGKLHLGHALTNSIQDTIVRYHRMKGDETLWVPGVD-----------HAGIAT 175

Query: 70  KVFVDQ 75
           +V V++
Sbjct: 176 QVVVEK 181


>gi|33519776|ref|NP_878608.1| leucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|48428534|sp|Q7VRA6|SYL_BLOFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33504121|emb|CAD83383.1| leucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 867

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 8/180 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G    +A
Sbjct: 30  KNKQKFYCLSMLPYPSGNLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEQA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N +  +     L  +YD    + T + +++   +  +  + +KG +
Sbjct: 90  AIIHKKNPSDWTYSNIQYMKQQLKSLGFAYDWKRELITNDPQYYRWEQWFFIILYEKGLV 149

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W    +    N+  +  G         H  +Q+ +   +F +++ Y D+LL+
Sbjct: 150 YRKTTLVNWCPYHNTVLANEQVINGGCW-----RCHTKIQYKKIPQWFIKITHYADQLLN 204


>gi|315635829|ref|ZP_07891091.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479808|gb|EFU70479.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 821

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK YI +   YP+ + H+GH     I D  AR  R    +VL   G D  G     A
Sbjct: 28  KTKEKKYILSMFPYPSGRIHMGHVRNYCIGDAFARHFRKSDFNVLHPIGWDSFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDK 116
           A    +  K +  +N    RD    L +S   F +  E    D     W+     K+ + 
Sbjct: 88  AIKHKLHPKKWTYENIDYMRDELKSLGLS---FSKNREFATSDELYTKWEQEFIIKMYEA 144

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G IY+   +  +   D+    ++++ +G     +      VQ  E  GY+  ++ Y  +L
Sbjct: 145 GIIYRKSATVNWCPHDQTVLANEQLEEGC---CWRCGTEVVQ-KEMPGYYIGITKYAQEL 200

Query: 177 L 177
           L
Sbjct: 201 L 201



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 24/171 (14%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KK+ + G +L  G K+SKS GNV+DP  +I++ G D  R F++      K+  ++   ++
Sbjct: 572 KKLLTQGMVLKDGAKMSKSKGNVVDPDLIIDKYGADTARLFILFAAPPTKELEWNDSAVE 631

Query: 348 ----------KRVNADLANGIGNLVSRSVSMILKD--------YDGMIPTPGAFTESD-- 387
                     +R      NG+ N  S   S++ K+        Y+ ++ +   FT++   
Sbjct: 632 GAFRFIKKFFERAENVNQNGLDNFKSIDHSVLSKEEKEARKKVYEALLKSNEVFTKTYTF 691

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            ++++ C   L      +Q Q      A+   +++ +         WEL K
Sbjct: 692 NTLIASCMEALNA----LQTQKNDSIWAEGYYILTNILEPIIPHACWELSK 738


>gi|315105120|gb|EFT77096.1| isoleucine--tRNA ligase [Propionibacterium acnes HL050PA2]
          Length = 1114

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 50/290 (17%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIACGKDGFYDKDGLKKRVN-----------ADLANGIGNLVSRSVSMILKD 372
                 VR++            L  R N           AD A G G +V  +V    + 
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQDDADPARGFGGVVPPAVDS--RG 739

Query: 373 YDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           + G++P   A T+    D  ++   + +++++ E + N    R    +   V E+  ++ 
Sbjct: 740 FGGVVPP--AVTQRHVLDRWLVGATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNWYV 797

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 RRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 843


>gi|307330510|ref|ZP_07609652.1| leucyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883845|gb|EFN14889.1| leucyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 958

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K ++     YP+ A  H+GH    I  DV AR+HR+ G +VL T G D  G    + A
Sbjct: 56  RPKKFVMDMFPYPSGAGLHVGHPLGYIATDVFARYHRMTGHNVLHTLGFDAFGLPAEQYA 115

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N R     L + +D
Sbjct: 116 VQTGTHPRVSTEANIENMRRQLRRLGLGHD 145



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 31/173 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSL N + P E+  E G D LR +   E+A G         + +  +     G   L
Sbjct: 730 KMGKSLKNAVTPDEICAEYGADTLRLY---EMAMG------PLDVSRPWDTRAVVGQYRL 780

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R    ++ +  G +    A  E DE+ L    + +  +R++M+    + A+A++  L 
Sbjct: 781 LQRLWRNVVDEGTGEVTVVDA--EPDEATLRALHKAIDGVRQDMEGLRFNTAIAKITELN 838

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + V +                    V  V   V   L +L+    P +A +++
Sbjct: 839 NHVTK--------------------VREVPRSVAEGLVLLISPLAPHVAEELW 871


>gi|296118756|ref|ZP_06837332.1| valine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968245|gb|EFG81494.1| valine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 907

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 20/133 (15%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDIL-----------RF 270
           DP  ++  W  +     +T G+ +  PD    KF+P ++ V G DI+            F
Sbjct: 460 DPD-VLDTWFSSALWPFSTLGWPEKTPD--LEKFYPTNVLVTGYDIIFFWVARMMMFGTF 516

Query: 271 HAIYWPAFLLSANLPLPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
            +   P  L + +   P+  F     HG +  + G K+SKSLGN IDP++ + + G DAL
Sbjct: 517 ASTETPELLGTGDDGRPQVPFRDLYLHGLVRDEHGRKMSKSLGNGIDPMDWVRDYGADAL 576

Query: 326 RYFLVREIACGKD 338
           R+ L R    G D
Sbjct: 577 RFTLARGANPGTD 589


>gi|242243018|ref|ZP_04797463.1| leucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233476|gb|EES35788.1| leucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 805

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++   G D LR + +          + + GL         +G  
Sbjct: 575 NEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGPLDAAIAWSEKGL---------DGSR 625

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ D + +         +D S+  V ++ ++++ E+      + A++Q++ 
Sbjct: 626 RFLDRVWRLIITDENSI--NKKIVDSNDHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMV 683

Query: 420 LVSEVDRYFDAQKPW 434
            ++E  +  +  KP+
Sbjct: 684 FINECYKTNEVYKPY 698



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ V    DG      H PV     + +  +++ Y D+LL
Sbjct: 151 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLL 203


>gi|150010360|ref|YP_001305103.1| valyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256839210|ref|ZP_05544720.1| valyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|166225526|sp|A6LIG7|SYV_PARD8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|149938784|gb|ABR45481.1| valyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256740129|gb|EEU53453.1| valyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 873

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 32/247 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NPD  +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 472 INNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKMPF-KSVYFTGIVR 526

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D D L ++   +  N
Sbjct: 527 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMLAAPAGNDIPFD-DALCEQ-GRNFNN 584

Query: 357 GIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N        ++K +  D  I  P A   + +       + + E+ ++     +  A+
Sbjct: 585 KIWNAFR-----LVKGWTVDDTIAQPEASAIAVKWFKMQLDKTIAEVDDSFSKYRLSEAM 639

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P     +   T E        L  LL  F+P + 
Sbjct: 640 MAVYKL------FWDEFSSWYLEMVKPGYQQPIDKATYEATLGFFDALLRLLHPFMPFIT 693

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 694 EELWQAL 700


>gi|189082975|sp|A4YI28|SYL2_METS5 RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|145702938|gb|ABP96080.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 950

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++K + + A  YPN+  H+GH    +  DV ARF R+ G +VLF  G    G  I   
Sbjct: 35  KDQKKFFTTVAFPYPNSPFHLGHGRTYVTGDVYARFMRMKGYNVLFPMGFHFTGTPIITM 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL 87
           A +     K  +D     +   ADV+
Sbjct: 95  ADDVAKGDKDLLDIFQNIYEIPADVI 120



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 27/224 (12%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P DL   G D++  H    I+  A +   NL  P+ V  +GFIL++G+K+SKSL N++
Sbjct: 582 WYPLDLRHSGPDLIPNHLSFFIFNHAGIFPENL-WPRGVAVNGFILYEGKKMSKSLRNIV 640

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + I   G D +R  L   +    D  + + G   R  AD      NL      M ++
Sbjct: 641 PLRKAIRTYGADVIRIALSSLVDMSSDANFTEAG--ARAIAD------NLKRFYELMQMQ 692

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDA 430
           D   +  TP  +  S         R+++++   M++      + +++ +L S ++ Y + 
Sbjct: 693 DGSTIDGTPEKWLRSK------LHRLVRDVTPLMESMRFREVINELLFNLSSYINEYLEM 746

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  E ++ N D       V  EV+     L+  F P L  +++
Sbjct: 747 VRS-ESREYNRD-------VIREVVETWTKLMAPFAPHLTEEMW 782


>gi|116075644|ref|ZP_01472903.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116066959|gb|EAU72714.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 978

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G     DG     +PADL++ G D  R  F +    +  ++ + P
Sbjct: 565 MDVWFDSGSSW---AGVASKRDGLS---YPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 618

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             + V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR ++
Sbjct: 619 Y-RTVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRLWV 671


>gi|84029562|sp|Q46XM7|SYI_RALEJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 963

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 21/207 (10%)

Query: 230 VWIDALTNYLTTTGY-----LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           VW D+ T + T         L +P   +A    ADL++ G D  R  FH+    A +L  
Sbjct: 558 VWFDSGTTHWTVIRGSHRDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASMLYG 617

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K + +HGF +  +G K+SKS+GN + P ++  ++G + +R ++      G+    
Sbjct: 618 KPPY-KALLTHGFTVDGEGRKMSKSVGNTVSPQDIANKMGAEIIRLWVASTDYSGELSIS 676

Query: 342 DKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
           D+  LK+ V +   + N +  L+S      L DYD     +P    + E D   +++  R
Sbjct: 677 DEI-LKRVVESYRRIRNTLRFLLSN-----LSDYDHSKHALPA-SEWLEIDRYAVALTER 729

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE 423
           + +E+  +  +   H  +A++ +  SE
Sbjct: 730 LQKEVLSHYDSYEFHPVVAKLQTFCSE 756



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K  +K  +     Y N   HIGHA   ++ D++ +   L GLD ++  G D HG  I
Sbjct: 54  KGAKKFVLHDGPPYANGDIHIGHAVNKVLKDMIVKARGLSGLDAVYVPGWDCHGMPI 110


>gi|255012376|ref|ZP_05284502.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|298374756|ref|ZP_06984714.1| valine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298269124|gb|EFI10779.1| valine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 873

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 32/247 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NPD  +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 472 INNPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKMPF-KSVYFTGIVR 526

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D D L ++   +  N
Sbjct: 527 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMLAAPAGNDIPFD-DALCEQ-GRNFNN 584

Query: 357 GIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N        ++K +  D  I  P A   + +       + + E+ ++     +  A+
Sbjct: 585 KIWNAFR-----LVKGWTVDDTIAQPEASAIAVKWFKMQLDKTIAEVDDSFSKYRLSEAM 639

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P     +   T E        L  LL  F+P + 
Sbjct: 640 MAVYKL------FWDEFSSWYLEMVKPGYQQPIDKATYEATLGFFDALLRLLHPFMPFIT 693

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 694 EELWQAL 700


>gi|239637919|ref|ZP_04678880.1| leucyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596482|gb|EEQ79018.1| leucyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 804

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPNYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ V    DG      H PV     + +  +++ Y D+LL  
Sbjct: 150 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            E    PE I  ++R
Sbjct: 205 LEELDWPESIKDMQR 219



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNVI+P +++   G D LR +
Sbjct: 574 NEKMSKSKGNVINPDDIVNSHGADTLRLY 602


>gi|41615045|ref|NP_963543.1| valyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74580061|sp|Q74NF3|SYV_NANEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|40068769|gb|AAR39104.1| NEQ252 [Nanoarchaeum equitans Kin4-M]
          Length = 751

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           V  +G  L K G K+SK  GNVI+P  ++E+ G D LRY+   EI+ G+D  Y  +  K 
Sbjct: 504 VVINGMGLDKHGRKMSKRYGNVIEPETLLEKYGADTLRYWFAMEISIGED--YRINEQKI 561

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                  N + N+ +       ++   + PT       DE I++    +  +  E ++N 
Sbjct: 562 AGIMKFMNKVWNIANYISQYQYRETQNLKPT-------DEWIINYVKYLENKAIEYIRNF 614

Query: 409 LIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAF 465
             ++   ++   V +V  + Y +  K  +  K N D A   LY   E V+  L+I     
Sbjct: 615 EFNKLARELYRFVWDVFANHYIELTK--KRAKNNDDSAIYALYFVFERVLNMLSIFSPGI 672

Query: 466 VPKLANKIFD 475
              LA K+++
Sbjct: 673 AKYLAKKLYN 682


>gi|315122642|ref|YP_004063131.1| valyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496044|gb|ADR52643.1| valyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 945

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 46/267 (17%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEK 302
           ++P ++ V G DIL F    W A ++   L   K            V+ H  +  K G+K
Sbjct: 536 YYPTNVVVTGFDILFF----WIARMMMMGLHFMKDSENKGIEPFRIVYMHALVRDKYGQK 591

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD-------KDGLKKRVNADLA 355
           +SKS GNV+DPI++I + G DALR++       G+D   D       ++ + K  NA   
Sbjct: 592 MSKSKGNVVDPIDLINQYGADALRFYFSIMAVQGRDIKLDLARVVGYRNFITKFWNAVRF 651

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I N    SVS + ++   +I         ++ I+   S V+ E+   ++N   +   A
Sbjct: 652 AEIKN-AKHSVSFVPQNVKCVI---------NKWIVVRLSTVINEVTTGIENHRFNDISA 701

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   V     D Y +  K   L + + D  S  L     V+  +  LL   +P      
Sbjct: 702 ILYRFVWHELCDWYVEFIKS-ILNQDDSDLISETLSCFSYVLYNVCKLLHPIIP------ 754

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLH 500
               FV +E   + S D   K  F+ H
Sbjct: 755 ----FVTEELYAYISPDGIDKKEFLCH 777



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+  +I D++ RF R+ G +VL+  G D           +AG+ T++ V++ 
Sbjct: 52 HMGHAFNSVIQDIMIRFERMRGKNVLWQPGMD-----------HAGIATQIMVERQ 96


>gi|296445331|ref|ZP_06887289.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257092|gb|EFH04161.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 871

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 31  QKPKYYVLEMFPYPSGRIHVGHVRNYSMGDVIARYKRAKGFDVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           Q +G     +   N  + R     + +S D
Sbjct: 91  QQSGSHPAKWTYANIASMRTQLKSMGLSLD 120



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 30/183 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK---------RVN 351
           EK+SKS  N +DP ++I   G D  R F++ +    +D  + ++G++          R+ 
Sbjct: 624 EKMSKSKRNTVDPDDIIASYGADTARLFVLSDSPPDRDVVWSEEGVQGASRFVHRVWRLA 683

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            +LAN    L +R+              P  F  +   I     R +  + +N++    +
Sbjct: 684 GELANVAAPLGARA--------------PAEFGAAALDIRKATHRAIAAVGDNIERLRFN 729

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A++    +E+    D       K      A  + +   E    LA+L+    P +A 
Sbjct: 730 TAIARIREFANELTSALD-------KIEATPVADDLAFAFREAAETLALLIAPMTPHVAE 782

Query: 472 KIF 474
           + +
Sbjct: 783 ECW 785


>gi|162149625|ref|YP_001192004.2| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 938

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++K + + A  YPN+  H+GH    +  DV ARF R+ G +VLF  G    G  I   
Sbjct: 23  KDQKKFFTTVAFPYPNSPFHLGHGRTYVTGDVYARFMRMKGYNVLFPMGFHFTGTPIITM 82

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL 87
           A +     K  +D     +   ADV+
Sbjct: 83  ADDVAKGDKDLLDIFQNIYEIPADVI 108



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 27/227 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P DL   G D++  H    I+  A +   NL  P+ V  +GFIL++G+K+SKSL N++
Sbjct: 570 WYPLDLRHSGPDLIPNHLSFFIFNHAGIFPENL-WPRGVAVNGFILYEGKKMSKSLRNIV 628

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + I   G D +R  L   +    D  + + G   R  AD      NL      M ++
Sbjct: 629 PLRKAIRTYGADVIRIALSSLVDMSSDANFTEAG--ARAIAD------NLKRFYELMQMQ 680

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDA 430
           D   +  TP  +  S         R+++++   M++      + +++ +L S ++ Y + 
Sbjct: 681 DGSTIDGTPEKWLRSK------LHRLVRDVTPLMESMRFREVINELLFNLSSYINEYLEM 734

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  E ++ N D       V  EV+     L+  F P L  +++  L
Sbjct: 735 VRS-ESREYNRD-------VIREVVETWTKLMAPFAPHLTEEMWHQL 773


>gi|83319332|ref|YP_424624.1| leucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123740039|sp|Q2SRI9|SYL_MYCCT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83283218|gb|ABC01150.1| leucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 804

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 17/183 (9%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ A  H+GH       DV +RF R+ G DVL   G D  G    + A 
Sbjct: 30  KKAYVLDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYAL 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKG---- 117
             G   + F  +N  NF+     +  S  YD  I T +  ++   + ++K++  KG    
Sbjct: 90  KTGNDPRDFTLKNIENFKAQLVKMGFSYDYDKEINTADPNYYKVTQWIFKELYKKGLAEN 149

Query: 118 ---DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
              D+   C      L ++     D +     G+Y   +    QW+       +++ Y D
Sbjct: 150 RNIDV-NWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWV------LKITDYAD 202

Query: 175 KLL 177
           KLL
Sbjct: 203 KLL 205



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 12/112 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSA 282
           +I Y+  ++  N +  T   D       K+ P DL++ G++    H +Y   W  FL   
Sbjct: 498 FIAYILANSKNNLIDLTS--DEAKKRLEKWLPVDLYIGGQEHAVGHLLYSRFWTHFLYDL 555

Query: 283 NLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            L LP     +++F+ G IL     K+SKS GNVI+P +VI+  G DALR +
Sbjct: 556 GL-LPTSEPFQRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHGADALRLY 606


>gi|291224246|ref|XP_002732116.1| PREDICTED: valyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 1058

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 11/122 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--LLSANL 284
           ++  W  +     +  G+ D  D  +  F+P  L   G DIL F       F   L   L
Sbjct: 579 VLDTWYSSALFPFSIFGWPDTTDDLEV-FYPGTLLETGHDILFFWVARMVMFGQKLCGKL 637

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL------VREIACGK 337
           P  ++V+ H  +    G K+SKSLGNVIDP++VI  + ++ L   L      V+EI   K
Sbjct: 638 PF-REVYLHAMVRDAHGRKMSKSLGNVIDPLDVIHGISLEGLHQLLHDSNLDVKEIQKAK 696

Query: 338 DG 339
           DG
Sbjct: 697 DG 698



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           R K      I  PN     H+GHA    + D L R+HR+ G   L+  G D         
Sbjct: 127 RGKNVFMICIPPPNVTGSLHLGHALTSSVQDALVRWHRMKGEITLWNPGCD--------- 177

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL-DISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             +AG+ T+V V++  + FR+      D+  D F+             +WK  ++KGD
Sbjct: 178 --HAGIATQVVVEK--KLFREKQLTRHDLGRDKFVDE-----------VWKWKNEKGD 220


>gi|260828189|ref|XP_002609046.1| hypothetical protein BRAFLDRAFT_59451 [Branchiostoma floridae]
 gi|229294400|gb|EEN65056.1| hypothetical protein BRAFLDRAFT_59451 [Branchiostoma floridae]
          Length = 765

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 12/131 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+ + H+GH     I+D +ARF R++G  VL   G D  G     AA   G+    +  
Sbjct: 4   YPSGRLHMGHVRVYTISDTVARFQRMNGYQVLHPMGWDAFGLPAENAAIERGLHPHDWTK 63

Query: 75  QNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
            N    R   + L +S+D    I T +  ++   + L+ K+ + G  Y          R 
Sbjct: 64  SNIEYMRKQIESLSLSFDWEKEISTCDPNYYRWTQYLFLKLFESGLCY----------RK 113

Query: 133 EAYYNDDEVYK 143
           EA  N D V K
Sbjct: 114 EALVNWDPVDK 124


>gi|193215275|ref|YP_001996474.1| valyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193088752|gb|ACF14027.1| valyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 904

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 12/133 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +    LTT  +    D  +    F+P    V G DI+ F    W A ++ A L
Sbjct: 459 VLDTWFSSWLWPLTTLRWEKPGDDGEVFEAFYPTSTLVTGPDIIFF----WVARMIMAGL 514

Query: 285 ------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P     F+      KG K+SKSLGN  DP+ V++E G DALR+ ++     G+D
Sbjct: 515 YFKGDVPFRDVYFTSIIRDMKGRKLSKSLGNSPDPLAVMDEYGTDALRFTVIYLAPLGQD 574

Query: 339 GFYDKDGLKKRVN 351
             +  +  ++  N
Sbjct: 575 VLFGAEKCEQGRN 587


>gi|168185547|ref|ZP_02620182.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296223|gb|EDS78356.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 812

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 52/258 (20%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKK 289
           Y+DN +  KA       K  P D +V G +    H +Y   F+  A       N   P K
Sbjct: 499 YVDNNNSEKAFDTDKVNKMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFK 557

Query: 290 VFSH-GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +H G IL   G K+SKS GN I P + I+E G D  R +L+   A  + G +  D +K
Sbjct: 558 SLTHQGLILGPDGFKMSKSKGNTIAPDDYIKEYGADVFRMYLMFGFAYSEGGAWSDDAIK 617

Query: 348 KRVNADLANGIGNLVSRSVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
                     +G  + + V  IL D     +    T     +S++ +       +Q + E
Sbjct: 618 ---------SMGKFIDK-VERILTDAREELNNSKNTKTTMEKSEKELNYARHYAIQHVTE 667

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI--- 460
           +      + A+A+++   + + +Y + +                  + +E +++  I   
Sbjct: 668 DTDKFQFNTAIARIMEYTNSLSKYLNEEN-----------------LNIEFLKEALIDYV 710

Query: 461 -LLQAFVPKLANKIFDIL 477
            LL  F P  + + +++L
Sbjct: 711 KLLSPFAPHFSEEQWELL 728



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+A + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSAAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             G+  +   D   +N  +M + L       ++D  I T    ++   + ++ K+ +KG 
Sbjct: 91  KTGIHPQ---DSTMKNIENMEEQLRSMGAMFNWDHEIVTCLPDYYKWTQWVFLKLYEKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYR 150


>gi|84489000|ref|YP_447232.1| leucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372319|gb|ABC56589.1| LeuS [Methanosphaera stadtmanae DSM 3091]
          Length = 953

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          REK+Y++ A  YP+   H+GH     + DV ARF R+ G +VLF       G  +   A+
Sbjct: 26 REKMYVTVAFPYPSGAMHVGHGRTYTVPDVYARFKRMQGFNVLFPMAWHVTGAPVVGIAK 85



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 26/231 (11%)

Query: 255 FWPADLHVIGKDI----LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           ++P +  +  KD+    L FH  +  A       P    VF  G +  +G+K+S S GNV
Sbjct: 574 WYPLNWRLSAKDLVGNHLSFHMFHHAAIFPQKYWPKGITVFGMGLL--EGQKMSSSKGNV 631

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFY---DKDGLKKRVNA--DLANGIGNLVSRS 365
           I   E I++ G D +R FL+      +D  +   + +G+++R+ A  +    + +L+   
Sbjct: 632 ILLSEAIDKYGADTVRLFLMSSAEPWQDFDWREKEVNGIQRRLEAIIEFPQKVESLIGEP 691

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEV 424
           + + +++   ++  P      ++ I+S  +R +    + ++     +AL   + L   +V
Sbjct: 692 LKLSIENNAPIVEKP-----INKWIISQINRKISTATDALEKFQTRKALQSSLFLFRKDV 746

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           D Y +      +     +   T++Y+    IR    LL  F+P    +I+D
Sbjct: 747 DYYLN-----RITIIGEEEKETLIYLVNTWIR----LLSPFIPYATEEIWD 788


>gi|314982808|gb|EFT26900.1| isoleucine--tRNA ligase [Propionibacterium acnes HL110PA3]
 gi|315091459|gb|EFT63435.1| isoleucine--tRNA ligase [Propionibacterium acnes HL110PA4]
 gi|327329191|gb|EGE70951.1| isoleucine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 1114

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 50/290 (17%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIACGKDGFYDKDGLKKRVN-----------ADLANGIGNLVSRSVSMILKD 372
                 VR++            L  R N           AD A G G +V  +V    + 
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQDDADPARGFGGVVPPAVDS--RG 739

Query: 373 YDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           + G++P   A T+    D  ++   + +++++ E + N    R    +   V E+  ++ 
Sbjct: 740 FGGVVPP--AVTQRHVLDRWLVGATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNWYV 797

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 RRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 843


>gi|302335806|ref|YP_003801013.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319646|gb|ADK68133.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 854

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 41  KPKRYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFDVLHPMGFDAFGLPAENAAI 100

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                A   T   + Q  +  R M    D  YD    T +  ++   + ++ K+ ++G  
Sbjct: 101 KHHTQASRWTHQNIAQTVKTMRRMGFSYD--YDRMFNTCDPEYYRWGQWMFIKMWERGLA 158

Query: 120 YKGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+      W         N+  V    DG+ +     P +  E   ++ R++ Y  +LL 
Sbjct: 159 YRATSPVNWCPTCQTVLANEQVV----DGRCWRCGSVPEK-RELSQWYLRITDYAQELLG 213


>gi|210634029|ref|ZP_03297947.1| hypothetical protein COLSTE_01865 [Collinsella stercoris DSM 13279]
 gi|210158973|gb|EEA89944.1| hypothetical protein COLSTE_01865 [Collinsella stercoris DSM 13279]
          Length = 862

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 47  KPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFDVLHPIGFDAFGLPAENAAI 106

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                A   T   +DQ     + M    D+  D  ++T    ++   + +++K+ ++G +
Sbjct: 107 KHNTQAAAWTYKNMDQALATMKRMGFSYDM--DRLVKTCSPDYYRWGQWIFEKLWERGLV 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + E    +++V    +G+ +      V+  + E ++ +++ Y  +LL  
Sbjct: 165 YRKKNPVNWCPKCETVLANEQV---TEGRCWRCDSE-VEKRDLEQWYIKITEYAQELLDD 220

Query: 180 YESHP 184
            E  P
Sbjct: 221 LEKLP 225



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 31/194 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFIL-HKGEKIS 304
           +F P D ++ G +    H +Y   F        LL  + P    +   G +    G+ +S
Sbjct: 563 RFMPVDNYIGGIEHAILHLLYSRFFTKALRDMGLLDVDEPF-TNLLCQGMVKDENGDTMS 621

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P  VIE  G D +R  ++      KD  +D + ++         G    + R
Sbjct: 622 KSKGNVVPPSSVIEPFGADTMRLAILFIAPPEKDFDWDPNAVE---------GANRFIKR 672

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCS--------RVLQEIRENMQNQLIHRALAQ 416
           +   + +    ++ T G  +  D++ L   +        R L +  E+      + A++ 
Sbjct: 673 AWRTVWQ----LVQTAGDASMLDKASLFKPALELYRERHRTLAKCTEDFDRGQFNTAISA 728

Query: 417 VISLVSEVDRYFDA 430
           ++ LV+  + Y +A
Sbjct: 729 MMELVNAANAYLNA 742


>gi|86606359|ref|YP_475122.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554901|gb|ABC99859.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 936

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 24/198 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++            ++   +P DL++ G D  R  F +    +  ++   P
Sbjct: 537 MDVWFDSGSSWAAVAR-------ARGLGYPVDLYLEGSDQHRGWFQSSLLTSVAVNGQAP 589

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K V +HGF+L  KG+K+SKSLGNVIDP+ +I            G D LR + V  +  
Sbjct: 590 Y-KAVLTHGFVLDEKGQKMSKSLGNVIDPLLLINGGSNPQTDPAYGADVLRLW-VSSVDY 647

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVC 394
             D    K  L +   AD+   I N     +S +          P  A TE D  IL   
Sbjct: 648 SGDVPIGKTILGQM--ADVYRKIRNTARFLLSNLYDFNPAQDAVPFEALTELDRYILHRL 705

Query: 395 SRVLQEIRENMQNQLIHR 412
             V  EI E+ +N   +R
Sbjct: 706 QEVGAEITESFENYQFYR 723


>gi|304440167|ref|ZP_07400058.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371430|gb|EFM25045.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 1032

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 122/262 (46%), Gaps = 25/262 (9%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  ++   P  K V  +  IL K G+K+SKS GN 
Sbjct: 541 QLFPADFICEGIDQTRGWFYSLLAISTYVTGKSPY-KNVLVNDLILDKYGKKMSKSKGNT 599

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P E+  + G D +R++L+          +D+DGL++ V +     + N+   +   + 
Sbjct: 600 VNPFELFNKYGADVVRWYLIYVSPPWAPTKFDEDGLRE-VESKFFRSLRNIY--NFFSLY 656

Query: 371 KDYDGMIPTPGAFTESDESI-----LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-V 424
            + DG+ P      E D ++     +S  + +++ + E+M+   + + +  +   V E  
Sbjct: 657 ANTDGIDPRDMNVDEKDYTLIDKWFISKYNSLVKSVNEDMEIFELTKVVRDIQDFVIEDF 716

Query: 425 DRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDILF----- 478
             ++  +      K   D     +Y VT +V+  ++ L+    P ++ ++F  L      
Sbjct: 717 SNWYIRRNRRRFWKPEMDAEKMAVYKVTYDVLLGISKLIAPIAPFISEELFKSLTDKESV 776

Query: 479 ------VADENRCFQSLDQRLK 494
                  ADE++  ++L+++++
Sbjct: 777 HLEDYPTADESKINKTLEEKME 798


>gi|302348946|ref|YP_003816584.1| Leucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329358|gb|ADL19553.1| Leucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 962

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)

Query: 255 FWPADLHVIGKDILRFHAI---YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P DL + GKD+++ H +   Y  A +   +L  P+ +  +G++L  G K+SKS GN I
Sbjct: 594 WYPVDLRISGKDLMQNHLLFFMYHHAAIFDESL-WPRGIGINGWVLINGAKMSKSTGNFI 652

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
              +++ E G DA R   + E+  G DG  D      R   D+   + +LV
Sbjct: 653 TLRQMLNEAGADATR---IAEVLAGADGGLDDANFTLR---DVDTALSDLV 697



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          + K +++    Y N  PH+G A+ ++  D+ AR+ R+ G +VLF  G    G  I  AA+
Sbjct: 38 KPKFFVTFPFPYMNGLPHLGSAFTILRVDITARYKRMRGYNVLFPQGWHATGGPIVAAAR 97


>gi|282882074|ref|ZP_06290715.1| leucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298104|gb|EFA90559.1| leucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 803

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R K+Y+     YP+ Q  H+GH       D++AR  R  G +VLF  G D  G      
Sbjct: 30  DRGKIYLLVEFPYPSGQGLHVGHPRPYTALDIVARKRRYQGYNVLFPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   QN ++F+D    +  S+D    I TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNKIHPAIVTKQNIKHFKDQLKSIGFSFDWSREINTTDPEYYKWTQWIFLQLYKHGLA 149

Query: 120 YK 121
           YK
Sbjct: 150 YK 151



 Score = 43.9 bits (102), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 30/180 (16%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEKISK 305
           +W P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+SK
Sbjct: 525 YWTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYVKRTSHGMILGENNEKMSK 584

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR- 364
           S GNV++P +++ + G D LR + +      K   + + G++         G    + R 
Sbjct: 585 SRGNVVNPDDIVRDYGADTLRTYEMFIGDFEKPVPWMETGVR---------GCRRFLDRV 635

Query: 365 -SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            ++S IL D D          +  ES+  +  + ++++  + +N   + A+A ++SL++E
Sbjct: 636 WNLSDILVDGD----------KYSESLEKLIHKTIKKVSYDYENLKANTAIAALMSLLNE 685


>gi|218193568|gb|EEC75995.1| hypothetical protein OsI_13120 [Oryza sativa Indica Group]
          Length = 1061

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 24/161 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +    LT  G+ D+    KA F+P  +   G DI+ F    W A +   
Sbjct: 576 DPD-VLDTWFSSGLFPLTVLGWPDDTADLKA-FYPGSVLETGHDIIFF----WVARMVMM 629

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L  ++P  +KV+ H  I    G K+SKSLGNVIDP++VI  + +D L   L      
Sbjct: 630 GMQLGGDVPF-EKVYLHPMIRDAHGRKMSKSLGNVIDPVDVINGISLDGLLKRL------ 682

Query: 336 GKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMILKDY 373
            K+G  D + LK        D  +GI    + ++   L  Y
Sbjct: 683 -KEGNLDPNELKIATEGKKKDFPDGIAECGTDALRFALVSY 722



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 140 HIGHALTVAIEDSMIRWRRMSGYNALWVPGVD-----------HAGIATQVVVEKKLMRE 188

Query: 81  RDMADVLDISYDDFI 95
           R++    DI  ++F+
Sbjct: 189 RNLTR-HDIGREEFV 202


>gi|58617028|ref|YP_196227.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311361|sp|Q5FHG5|SYL_EHRRG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58416640|emb|CAI27753.1| Leucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 830

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 41/87 (47%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y+     YP+   H+GH     I DV+AR+ R  GL V    G D  G     AA + 
Sbjct: 26  QCYVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGLHVFHPIGWDAFGLPAENAALSY 85

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
            ++ +V+  +N  N R     + +SY+
Sbjct: 86  NISPQVWTRKNIDNMRSQLKSIGLSYN 112


>gi|322412238|gb|EFY03146.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 933

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++   
Sbjct: 524 IMDVWFDSGSSWNGVMNARENLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGYA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN+I P +V ++ G D LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVA 623



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+AD LD+     +    K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLADYLDMCRQYALSQVNKQRDDFKRLGVSADWENPYVTLDPQFEADQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 VMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|256843734|ref|ZP_05549222.1| leucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256615154|gb|EEU20355.1| leucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 804

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      E+D ++  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDENDGTLDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRKNMRQWM------LKMTAY 196


>gi|218512330|ref|ZP_03509170.1| methionyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 38

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/35 (57%), Positives = 26/35 (74%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLA 35
          M ++   YI+TAI+YPN +PHIGHAYE I  D +A
Sbjct: 4  MTDKTPFYITTAISYPNGKPHIGHAYEQIATDAMA 38


>gi|254167740|ref|ZP_04874590.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289597141|ref|YP_003483837.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623268|gb|EDY35833.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534928|gb|ADD09275.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 939

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 37/201 (18%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF-----TTGT---- 51
           ++ ++K +I+    Y +   HIGH     + D++ARF RL G +VLF      TGT    
Sbjct: 24  VENKKKFFITVPYPYMSGSLHIGHGRTFTMGDIIARFKRLQGYNVLFPMAFHVTGTPVLA 83

Query: 52  --------------------------DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD 85
                                     ++  ++I  +        + F ++  ++F  M  
Sbjct: 84  IADAIKAGDEKVINLYKEYVRIYEDDEDRVEEIVSSFVEPENIARYFAEKTQQDFIGMG- 142

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
              I +     T E  ++      +KK+ DKG I KG Y   YS+ D     +D++  G 
Sbjct: 143 -YSIDWRRKFHTAEPIYNKFVEWQFKKLYDKGVIKKGKYPITYSIEDGNPVGEDDIEDGD 201

Query: 146 DGQYYNAQHNPVQWMEEEGYF 166
             +    +   +++  E+GY 
Sbjct: 202 TNKVSIMEFTAIKFQFEDGYL 222



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 39/162 (24%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK +  +G ++ +G KISKS GNVI    V ++ GVD  R +      C  +   D D +
Sbjct: 619 PKSITLNGLMIREGAKISKSKGNVIPLAHVADKYGVDLFRLY------CAVNA--DLDSV 670

Query: 347 KKRVNADLAN------GIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                +++A+         N++  SV  + LK+YD            D+ +LS   R L+
Sbjct: 671 VDWRESEIASLRRRFVQFVNILEESVEAVPLKEYDWY----------DKWLLSKFYRRLK 720

Query: 400 E---------IRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           E         IR+ M N L H      ++ V E +++  A++
Sbjct: 721 ESVALFDSFRIRDAMINMLFH-----FMNDVKEYEKFVGAER 757


>gi|89052902|ref|YP_508353.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999652|sp|Q28VD4|SYL_JANSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|88862451|gb|ABD53328.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 863

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + HIGH     + DV+AR  +  G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARHKKAMGHNVLHPMGFDAFGLAAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI-Y 120
           + G+  K +  +N  + RD    L  S D    + T +  ++   + L+  + + G I  
Sbjct: 91  DRGIHPKDWTYKNMDDMRDQMRPLGFSIDWSRDLATCDPDYYGQQQALFIDMMEAGLIDR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  + D     +++V  G  G    A+   V+  E   +FF++S Y D+LL
Sbjct: 151 KNAVVNWDPV-DMTVLANEQVEDG-KGWRSGAE---VERKELTQWFFKISDYSDELL 202



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 34/179 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK------RVNADLA 355
           K+SKS  NV+DPIE+I++ G D  R+F++ +    +D  +   G +       RV A L 
Sbjct: 627 KMSKSKNNVVDPIEIIKQYGADTARWFVLSDSPPERDVEWTASGAEAAYKHLGRVWA-LC 685

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           + I    +RSVS   +   G         E D ++L    + ++++   + +   + A+A
Sbjct: 686 DRISE-AARSVSEEAQPAAG---------EHDTALLREMHKTIRDVTNGVDSFGFNAAIA 735

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++ +  + + +   + K                    E +  LA L+    P L+  I+
Sbjct: 736 KLYAFTNTLQKSKASHK-----------------AQREAVMTLAQLMAPMTPHLSEDIW 777


>gi|311113646|ref|YP_003984868.1| leucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945140|gb|ADP41434.1| leucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 831

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 18/199 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+   H+GHA    I D+ AR+++  G DVL   G D  G     AA 
Sbjct: 41  KGRRYVLDMFPYPSGDLHMGHAEAFAIGDMNARYYKQCGYDVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G   K +    +D  + +F+  A  +D  +D  + T++  ++   + L+++   +G  
Sbjct: 101 KNGTHPKEWTYKNIDTQAESFKRYAIAVD--WDRRLHTSDPEYYKWTQWLFEQFYKQGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +  +D+    +++V  GA  +      + +  QW      +F+++ Y  +LL
Sbjct: 159 YRKDSMVNWCPKDQTVLANEQVVNGACERCGTTVTKKSLNQW------YFKITDYAQQLL 212

Query: 178 SYYES----HPEFILPIER 192
              E      PE +L ++R
Sbjct: 213 DDMEQLEGKWPERVLLMQR 231



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)

Query: 244 YLDNP-DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D    + W A D++V G +    H +Y   F        L+    P  K + + 
Sbjct: 530 YAEGPFDPQAIREWGAVDMYVGGVEHAILHLLYARFFTKVIRDLGLIEHGEPF-KALMNQ 588

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G +L+ G+ +SKSLGN ++  E ++  GVDA+R  ++
Sbjct: 589 GQVLNGGKAMSKSLGNGVNLGEQLDTFGVDAVRTTMI 625


>gi|226356378|ref|YP_002786118.1| leucyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318368|gb|ACO46364.1| putative Leucine--tRNA ligase (Leucyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 831

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 25/204 (12%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDA---LT 236
           P   LP+ R  E + F  +G   L L+R        +   P       M  ++D+   + 
Sbjct: 463 PAEELPV-RLPESVEFTPTGQSPLKLNRDWVQTTCPVCGGPAERDTDTMDTFVDSSWYMY 521

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS- 292
            YL+        D + A   P DL+  G +    H +Y   W   +    L    + F+ 
Sbjct: 522 RYLSPHSEGHPFDPAHAHLLPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFAR 581

Query: 293 ---HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
               G IL +  EK+SKS GNV+DP +++ E G D +R FL+        G +D  G+  
Sbjct: 582 LRNQGMILGEDNEKMSKSRGNVVDPDDLVREYGADTVRTFLMFIAPWELGGPWDSQGI-- 639

Query: 349 RVNADLANGIGNLVSRSVSMILKD 372
                  NG    +SR  ++  +D
Sbjct: 640 -------NGPAKWLSRVWNLYFED 656



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 14/181 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF  G D  G     AA  
Sbjct: 49  EKHYALTMFPYPSGNLHIGHWYANVAPDARARWMRMRGYNVLFPMGFDAFGLPAENAAIK 108

Query: 65  AGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +     T   ++  +  FR M  ++D S      T +  ++   +  + +   +G  Y
Sbjct: 109 NNLDPAKWTYSNIEHMTGQFRRMGTMIDWSRK--FATCDPEYYRWNQWFFTEFFRRGLAY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K      +  +D+    +++V  G   +   A  + N  QW      + +++ Y D+LL 
Sbjct: 167 KKDGLVNWCPKDQTVLANEQVVNGHCERCGTAVERRNLSQW------YLKITDYADELLD 220

Query: 179 Y 179
           +
Sbjct: 221 F 221


>gi|161527875|ref|YP_001581701.1| leucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339176|gb|ABX12263.1| leucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 955

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ++ K +I+ A  YPN+  HIGH     +ADV ARF+R+ G +VLF  G    G  +   A
Sbjct: 28 DKPKKFITVAYPYPNSPQHIGHGRTYTLADVHARFYRMKGYNVLFPMGFHYTGTPVLGMA 87

Query: 63 QNAGVTTKVFVD 74
          +      K  +D
Sbjct: 88 KRIEAGEKEILD 99



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 93/226 (41%), Gaps = 23/226 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWP---AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P D    G+D+++ H  ++      +   NL  P+++  +G ++  G K+SKS+GN+I
Sbjct: 572 FYPVDSRHSGRDLVQNHLSFFVLNHVAIFEKNL-WPQEIVVNGSVMMDGAKMSKSMGNII 630

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
                I++ G D +R  ++      +D  ++ + +   + + L + +    S   S I  
Sbjct: 631 PLRAAIKDHGADPIRLAIISSAELLQDADFNMESVSG-IQSKLESLLEACSSLKTSEI-- 687

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
                    G     D  ILS     + EI E ++   +  AL  ++         F+  
Sbjct: 688 ---------GELQAEDRWILSKTQSKIAEITEAVEKMRLREALHDILFT-------FETD 731

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             W  K+        V  +  ++      +L  F P +A +++  L
Sbjct: 732 LSWYQKRIAAKGRDDVSGILHQINSSRVAMLSPFAPHVAEEMWKNL 777


>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 921

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    +  ++   P  K V SHGF L  +G K+SKSLGNV+ P
Sbjct: 547 PADLYLEGSDQYRGWFNSSLSTSVAVTGEAPY-KGVLSHGFALDGEGRKMSKSLGNVVIP 605

Query: 314 IEVIEEVGVDALRYFLV 330
            +V++++G D LR ++ 
Sbjct: 606 EKVMKQLGADILRLWVA 622



 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-AQNAGVTTKVFV 73
           Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A  +N  V  K   
Sbjct: 58  YANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETALTKNKKVNRKEMT 117

Query: 74  DQNSRNF------------RDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
               R              R+    L +   +D+   T + ++      ++  ++ KG I
Sbjct: 118 VAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYI 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG    ++S   E+   + E+
Sbjct: 178 YKGLKPVYWSPSSESALAEAEI 199


>gi|293379073|ref|ZP_06625226.1| leucyl-tRNA synthetase domain protein [Enterococcus faecium PC4.1]
 gi|292642352|gb|EFF60509.1| leucyl-tRNA synthetase domain protein [Enterococcus faecium PC4.1]
          Length = 317

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 20/184 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 27  DYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEN 86

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +V+E  G D LR + +          + ++GL+         G  
Sbjct: 87  NEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLE---------GSR 137

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + + M       T +D  +  V  + ++++ E+ +N   + A++Q++ 
Sbjct: 138 KFLDRVWRLIVDENNKM--RDRITTLNDGKLDKVYHQTVKKVTEDYENLHFNTAISQLMV 195

Query: 420 LVSE 423
            ++E
Sbjct: 196 FINE 199


>gi|219124456|ref|XP_002182519.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405865|gb|EEC45806.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 899

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 52/248 (20%)

Query: 247 NPDGSKAKF-------W-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVF 291
           +P  SK  F       W P DL+V G +    H +Y   W   L        P P +K+ 
Sbjct: 603 DPKNSKEAFSKVVDEEWMPVDLYVGGAEHAVLHLLYARFWHQVLFDLGYTKHPEPFQKLV 662

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
             G IL   GEK+SKS GNV++P +++ E G DALR +   E+  G       + +K   
Sbjct: 663 HQGMILGSDGEKMSKSRGNVVNPDDIVGEQGADALRLY---EMFMGP-----LEAVKPWQ 714

Query: 351 NADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            + +A          V    K YD +        T+ D+    +  + ++++ +++++  
Sbjct: 715 TSQVAG--------VVRFQRKVYDTVSTAVANGKTKMDQETARLLHKTMKKVTQDIESMA 766

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A++ ++ L + +           LK   P          VE   +LA+++  F P L
Sbjct: 767 FNTAISALMVLTNHLQ---------SLKANVP----------VEAAEKLALMVSPFAPHL 807

Query: 470 ANKIFDIL 477
             + + +L
Sbjct: 808 GEECWSML 815



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 9/183 (4%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH      +DV++R+ R+ G DVL   G D  G    + A
Sbjct: 103 KPKKYVLDMFPYPSGAGLHVGHPEGYTASDVMSRYWRMKGYDVLHPIGWDSFGLPAEQFA 162

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N  NF+     L  SY  D  I TT++ +    + ++ ++  KG   
Sbjct: 163 IQTGTKPASTTKKNIANFKRQLKSLGFSYDWDREIATTDRGYVQWTQWIFLQLFRKGLAE 222

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           +   S  W         N++ +    +G      H PV+ +    +  R++ Y D+L + 
Sbjct: 223 QSEVSVNWCPALGTVLANEEVI----NGLSERGDH-PVERVPLRQWVLRITDYADRLEAG 277

Query: 180 YES 182
            E 
Sbjct: 278 LEG 280


>gi|254780933|ref|YP_003065346.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040610|gb|ACT57406.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 947

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 16/96 (16%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEK 302
           ++P  + V G DIL F    W A ++   L   K            V+ H  +  K G+K
Sbjct: 537 YYPTSVLVTGFDILFF----WVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQK 592

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +SKS GNV+DPI+VI++ G DALR++       G+D
Sbjct: 593 MSKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRD 628



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 16/87 (18%)

Query: 12  AIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           A+  PN     H+GHA+   I D++ RF R+ G +VL+  GTD           +AG+ T
Sbjct: 42  AMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTD-----------HAGIAT 90

Query: 70  KVFVDQNSRNFRDMADVL-DISYDDFI 95
           ++ V+  SR F   +    DI  D FI
Sbjct: 91  QITVE--SRLFAQSSLTREDIGRDAFI 115


>gi|261405570|ref|YP_003241811.1| leucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282033|gb|ACX64004.1| leucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 813

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 38  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  QN   FR     L  SY  D  I TT+  ++   + ++ ++  +G  Y
Sbjct: 98  MDTGKHPREFTVQNIDTFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYKRGLAY 157

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ +    DG+     H PV       +  R++ Y D+LL
Sbjct: 158 VAEVPVNWCEALGTVLANEEVI----DGKSERGGH-PVVRKPMRQWILRITEYADRLL 210



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 19/181 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEK 302
           K K W P DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK
Sbjct: 525 KQKEWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVDTKEPFQKLVNQGMILGNNNEK 584

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVI+P +++ E G D LR +         + F       K  N +   G    +
Sbjct: 585 MSKSRGNVINPDDIVNEYGADTLRVY---------EMFMGPLEATKPWNTNGVEGTHRFL 635

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR   + + D DG +       E  +       + ++++ ++ ++   + A++Q++  ++
Sbjct: 636 SRVWRLFIGD-DGQLNPKIVDGEGTDEFKRTLHKTIKKVTDDFEHLRFNTAISQLMIFIN 694

Query: 423 E 423
           E
Sbjct: 695 E 695


>gi|183601710|ref|ZP_02963080.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190792|ref|YP_002968186.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196198|ref|YP_002969753.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183219316|gb|EDT89957.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249184|gb|ACS46124.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250752|gb|ACS47691.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793781|gb|ADG33316.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 963

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+  +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 39  RQSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+DD
Sbjct: 99  VQTGQHPRITTEQNIANMRRQLRRMGLSFDD 129


>gi|126632628|emb|CAM56332.1| novel protein similar to vertebrate valyl-tRNA synthetase 2-like
           (VARS2L) [Danio rerio]
          Length = 861

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 71/283 (25%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISK 305
            +F+P  +   G D++ F    W A +      L+  LP  K+V  H  +  K G K+SK
Sbjct: 533 TQFYPNSILETGSDLIFF----WVARMVMLGTELTGQLPF-KQVLFHSLVRDKYGRKMSK 587

Query: 306 SLGNVIDPIEVIE-------------------------------------EVGVDALRYF 328
           SLGNVIDP++VI                                      E G DALR+ 
Sbjct: 588 SLGNVIDPLDVISGVSLERLQEKVKEGNLDPRESIVAIEAQKKDFPKGIPECGTDALRFA 647

Query: 329 LVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           L    A G+D        L  R      N +   V  +++ +    D  +PTP A T   
Sbjct: 648 LCSYRAQGEDISLSMSHVLSCR---HFCNKMWQTVRFTLATL---NDASLPTPLAETYPL 701

Query: 388 ESILS-VCSRV---LQEIRENMQNQLIHRALAQVIS--LVSEVDRYFDAQKPWELKKTNP 441
            S+   +CSR+   ++E  +  ++  +H   + + S  L    D Y ++ KP    +   
Sbjct: 702 SSMDKWICSRLYSTVKECEQGFESYELHTVTSALHSFWLHCLCDVYLESIKPLLKPEGCE 761

Query: 442 DR------ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +R      A++VLY +V V   LA LL  F+P L  +++  L 
Sbjct: 762 ERVGERQVATSVLYHSVSV--SLA-LLSPFMPFLTEELWQRLL 801



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 8   YISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           + S  I  PN     H+GHA  + I D LAR+ R+ G  VL+  G D  G
Sbjct: 64  HFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCDHAG 113


>gi|222112431|ref|YP_002554695.1| leucyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782496|sp|B9MH67|SYL_DIAST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221731875|gb|ACM34695.1| leucyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 910

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     A
Sbjct: 30  QAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV    +   N     +  + M   +D S +  + T +  ++   + L+ K+ DKG
Sbjct: 90  ALKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSRE--VATCDPDYYKWNQWLFLKMLDKG 147

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL
Sbjct: 148 IAYRKTQVVNWDPVDQTVLANEQVI---DGRGWRT-GALVEKREIPGYYLKITDYAQELL 203

Query: 178 SYYE 181
            + +
Sbjct: 204 DHVQ 207


>gi|26553840|ref|NP_757774.1| leucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|29336535|sp|Q8EW18|SYL_MYCPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|26453847|dbj|BAC44178.1| leucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 799

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 7/81 (8%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P D+++ G++    H +Y   W  FL   N+   K    K+ + G IL  GEK+SKS GN
Sbjct: 523 PVDIYIGGQEHAVLHLLYARFWHKFLHQINVVPNKEPFYKIINQGMILVNGEKMSKSKGN 582

Query: 310 VIDPIEVIEEVGVDALRYFLV 330
           V++P + +   G DALR +++
Sbjct: 583 VVNPSDFVVSHGADALRLYMM 603



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 22/188 (11%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI 58
           ++ K Y      YP+ A  H+GH       DV ARF R  G  VL   G D  G   ++ 
Sbjct: 28  KKPKFYALDMFPYPSGAGLHMGHVKSYTPTDVYARFKRYQGYSVLHPMGWDAFGLPAEQF 87

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDK 116
           A A +N   T   F DQN  NF+   D L   +D    + TT+   +   + ++ K+ + 
Sbjct: 88  ALATKNHPAT---FTDQNINNFKLQIDQLGFWFDWNKEVNTTDPNFYKWTQWIFIKLFEN 144

Query: 117 G-----DI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRL 169
           G     DI    C      L +E    D++  K ++   Y     P+ QW+       ++
Sbjct: 145 GLAEIKDIDVNWCQELGTVLANEEVLTDEKGNKVSERGKYPVIKKPMKQWV------LKI 198

Query: 170 SAYQDKLL 177
           + + D+L+
Sbjct: 199 TKFADQLI 206


>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 921

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    +  ++   P  K V SHGF L  +G K+SKSLGNV+ P
Sbjct: 547 PADLYLEGSDQYRGWFNSSLSTSVAVTGEAPY-KGVLSHGFALDGEGRKMSKSLGNVVIP 605

Query: 314 IEVIEEVGVDALRYFLV 330
            +V++++G D LR ++ 
Sbjct: 606 EKVMKQLGADILRLWVA 622



 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-AQNAGVTTKVFV 73
           Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A  +N  V  K   
Sbjct: 58  YANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETALTKNKKVNRKEMT 117

Query: 74  DQNSRNF------------RDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
               R              R+    L +   +D+   T + ++      ++  ++ KG I
Sbjct: 118 VAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYI 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG    ++S   E+   + E+
Sbjct: 178 YKGLKPVYWSPSSESALAEAEI 199


>gi|254520462|ref|ZP_05132518.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914211|gb|EEH99412.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 184

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           VN DL N + N +++++  I K+YD  IP      +    IL++      ++ +N++   
Sbjct: 17  VNRDLVNSLSNFINKTIDFINKNYDSKIPNGIISNDFKNEILNLYF----DVGDNIEEGK 72

Query: 410 IHRALAQVISLVSEVDRYF-DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              A+  ++S V ++++Y  D     +L+K+N +  + + Y  V+VI  L+ LL+ F+P 
Sbjct: 73  FKNAILDIMSYVKKMNKYLEDELLKIKLQKSNKEIKNKI-YECVQVIANLSNLLEPFMPD 131

Query: 469 LANKI 473
              KI
Sbjct: 132 TCKKI 136


>gi|154250197|ref|YP_001411022.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769399|sp|A7HN82|SYL_FERNB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154154133|gb|ABS61365.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 819

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     AA
Sbjct: 30  DKKKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMQGYNVLHPFGYDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               +  K +   N    R     + ISYD   + I  TE  ++   + ++ K+ + G  
Sbjct: 90  IAHKIHPKKWTLDNINVIRGQIKKIGISYDWNREVITCTED-YYKWTQWVFLKLYEAGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLS 178
           YK   +  +    +    +++V    DG+         ++++E+  ++F+++ Y +KLL 
Sbjct: 149 YKKPGAVNWCPSCQTVLANEQV---KDGKCERCGTTVTMKYLEQ--WYFKITDYAEKLLE 203

Query: 179 YYESHP 184
             +  P
Sbjct: 204 GLDRLP 209



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/316 (19%), Positives = 136/316 (43%), Gaps = 52/316 (16%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PE  LP+ R  E + F+ +G   L+LS +           P +     ++ +  ++ ++ 
Sbjct: 446 PEKDLPV-RLPENVEFLPTGQSPLTLSEEFKHTTCPKCGGPAHRE---VETMDTFVDSSW 501

Query: 244 YL---------DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL---------LSAN 283
           Y          D P +     +W P D ++ G +    H +Y   F+         L  +
Sbjct: 502 YFLRYVNPKLDDKPFESDDVNYWLPVDQYIGGVEHAVLHLLY-SRFITKVLHDLGYLKFD 560

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  + +F+ G I   G K+SKS GNV+ P ++I + G D LR +++      KD  ++ 
Sbjct: 561 EPF-ENLFTQGMIYKDGWKMSKSKGNVVSPDDMINKYGADTLRMYILFMAPPEKDAEWND 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQ 399
            G+         +G+   + R  +   K  D +          F + ++++      +++
Sbjct: 620 AGI---------DGVNRFIKRLWNNYYKILDIINSNDTKNENEFGKEEKNLRRKLHAMIK 670

Query: 400 EIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +I+E+++     + A+A ++   +++  Y +  K       +P++      +  E+  ++
Sbjct: 671 KIKEDIEGGFKFNTAIAGLMEFNNQLSDYLENTK-------SPNKK-----LLREIAEKV 718

Query: 459 AILLQAFVPKLANKIF 474
            ++L  F P +A +++
Sbjct: 719 VLILSPFAPHMAEEMW 734


>gi|330685460|gb|EGG97115.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 804

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPNYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ V    DG      H PV     + +  +++ Y D+LL  
Sbjct: 150 VDEVAVNWCPTLGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YE--SHPEFILPIER 192
            E    PE I  ++R
Sbjct: 205 LEDLDWPESIKDMQR 219



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 52/248 (20%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P +++   G D LR +      L   IA    G    DG ++     
Sbjct: 574 NEKMSKSKGNVINPDDIVNSHGADTLRLYEMFMGPLDAAIAWSDKGL---DGSRR----- 625

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                   + R   +I+K+ DG +      T +++S+    ++ ++++ E+      + A
Sbjct: 626 -------FLDRVWRLIVKE-DGSLSDKIVET-NNKSLDKTYNQTVKKVTEDFDTLGFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++Q++  +++  +  +  KP+                    I     +L    P +  ++
Sbjct: 677 ISQLMVFINDCYKADEIYKPY--------------------IEGFVTMLAPIAPHIGEEL 716

Query: 474 FDILFVAD 481
           +D L  +D
Sbjct: 717 WDTLGHSD 724


>gi|313665541|ref|YP_004047412.1| leucine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949602|gb|ADR24198.1| leucine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 804

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 5/177 (2%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ A  H+GH       DV +RF R+ G DVL   G D  G    + A 
Sbjct: 30  KKAYVLDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYAL 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI-Y 120
             G   + F  +N  NF+     +  S  YD  I T +  ++   + ++K++  KG    
Sbjct: 90  KTGNDPRDFTLKNIENFKAQLVKMGFSYDYDKEINTADPNYYKVTQWIFKELYKKGLAEN 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W         ND+ + K         +H PV   +   +  +++ Y DKLL
Sbjct: 150 RNIDVNWCQELGTVLANDEIIEKDGLMVSERGEH-PVVKRKMRQWVLKITDYADKLL 205



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 12/112 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSA 282
           +I YV  ++  N +   G  D       K+ P DL++ G++    H +Y   W  FL   
Sbjct: 498 FIAYVLANSKNNLIDLIG--DESKKRLEKWLPVDLYIGGQEHAVGHLLYSRFWTHFLYDL 555

Query: 283 NLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            L LP     +++F+ G IL     K+SKS GNVI+P +VI+  G DALR +
Sbjct: 556 GL-LPTSEPFQRLFNQGMILGSDNRKMSKSWGNVINPDDVIDTHGADALRLY 606


>gi|296282118|ref|ZP_06860116.1| leucyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 841

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 6/182 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ + HIGH     + DVLAR+  + G +VL   G D  G     AA
Sbjct: 32  DRPKSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKAMRGHEVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N  + +     L  + D    + T E  ++   + L+  + + G +Y
Sbjct: 92  MEKGVHPGKWTRENIESMKAQLKRLGFALDWSRELATCEPDYYGHEQALFIDLFEAGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V +G  G    A+   V+  +   +F +++ + ++LL   
Sbjct: 152 RKESEVNWDPVDQTVLANEQVIEGR-GWRSGAE---VEKRKLAQWFLKITDFAEELLDGL 207

Query: 181 ES 182
           ES
Sbjct: 208 ES 209



 Score = 43.9 bits (102), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 18/135 (13%)

Query: 294 GFILHKGE--KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           GF +  G   K+SKS  NV+DP  +I + G DA+R+F++ +    +D  + + G++    
Sbjct: 607 GFPVSVGRVVKMSKSKRNVVDPDTIIAQYGADAVRWFMLSDSPPERDLPWSESGIE---- 662

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                G    V R V  ++ ++D     P A  E D  +    +R + ++ E ++    +
Sbjct: 663 -----GCARFVQR-VWRLVGEHD-----PAAQGE-DADLARKTARSVHDVAETIEALHFN 710

Query: 412 RALAQVISLVSEVDR 426
           +A+A++  LV  +++
Sbjct: 711 KAVAKLYELVGALEK 725


>gi|260431128|ref|ZP_05785099.1| isoleucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414956|gb|EEX08215.1| isoleucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 972

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 217 GIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FH 271
           GI  PDD   +   + VW D+ + +       D  DG+      AD+++ G D  R  FH
Sbjct: 566 GIVNPDDYDQVFDVLDVWFDSGSTHAFV--LRDREDGAPDGI--ADVYMEGTDQHRGWFH 621

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +    A       P  + V +HGF L  KG K+SKSLGN I P EVI + G D LR ++ 
Sbjct: 622 SSMLQACGTIGRAPY-RNVVTHGFTLDEKGNKMSKSLGNTIVPEEVIRQYGADILRLWVA 680

Query: 331 R 331
           +
Sbjct: 681 Q 681



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I     
Sbjct: 54  RKPFILHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKIE 113

Query: 60  ----KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               K  +N      +   Q  R F +    +DI  ++F R
Sbjct: 114 EQYRKKGKNKDEVPVIDFRQECRKFAE--GWIDIQREEFKR 152


>gi|223993195|ref|XP_002286281.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977596|gb|EED95922.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1083

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 29/270 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++   T    + D      +PAD+++ G D  R  F +    +   +    
Sbjct: 629 MDVWFDSGSSWAGVTQQRADEDMGLG--YPADIYLEGSDQHRGWFQSSLLTSVAANKGQA 686

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVR---- 331
             K V +HGF+L  KG K+SKSLGNV++P++VIE           G D LR ++      
Sbjct: 687 PYKSVLTHGFVLDEKGFKMSKSLGNVVNPLQVIEGGNNKKLEPAYGADVLRLWVASVDYA 746

Query: 332 -EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            ++  G +         +++       IGNL   + +     Y+ +          D+ +
Sbjct: 747 GDVRVGANIIKQTFESYRKLRNTARYLIGNLADFNPATDSIPYEDL-------PSMDKWM 799

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD-AQKPWELKKTNPDRASTV 447
           L   S VL E+ + M      RA  +++   +    + Y D A+    +   N  R  + 
Sbjct: 800 LGTLSSVLNEVDDAMSQYQFSRATQELLRFSTSDLSNFYLDVAKDRLYISAVNDARRRSC 859

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V   ++   A  +   +P +A  I+  L
Sbjct: 860 QTVLHSLLEGFAKSIAPILPHMAEDIWQNL 889


>gi|219851348|ref|YP_002465780.1| leucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545607|gb|ACL16057.1| leucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 926

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 23/219 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK YI+ A  YP+   H+GH    ++ DV+ARF R+ G  VL+       G  +   +
Sbjct: 27  DKEKFYITVAYPYPSGAMHVGHGRTYMVPDVIARFWRMRGKQVLYPMAFHVTGAPVIGIS 86

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL--------WKKIS 114
           +      +  +      +R    VLD  + D +       ++  R++        W++  
Sbjct: 87  KRIARGDEAAIHLYRDLYRVPQQVLD-QFTDPLAIVNHFSNEYERVMRMCGLSIDWRRRF 145

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-------HNPVQWMEEEGYFF 167
              D     YS +   +    YND  V KGA    Y  Q       H+ ++  + E   F
Sbjct: 146 TTVD---PTYSKFVEWQFSHLYNDGHVAKGAHPVRYCPQDDNPVGDHDLLEGEKAEVIKF 202

Query: 168 RLSAYQDK--LLSYYESHPEFILPIERR--NEVISFVKS 202
            L  YQ +  L+      PE I  +     N  +++VK+
Sbjct: 203 TLVMYQSEEGLIPTATLRPETIYGVTNLWVNPTVTYVKA 241



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 249 DGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEK 302
           D  +A+F   +P D     KD++  H  +   F   A  P    PK +   G  L  G K
Sbjct: 548 DALRAEFMYWYPYDFRFSAKDLISNHLTF-QVFHHVAIFPEQYQPKGIVVFGMGLLNGAK 606

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +S S GNV    + ++E G D +R FL+
Sbjct: 607 MSSSKGNVFLLEDAVQEFGADTVRMFLM 634


>gi|299135641|ref|ZP_07028825.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601765|gb|EFI57919.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 920

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 24/106 (22%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLP-------------KKVFSH 293
           A F+P  L V G DIL     +W A ++        ++P+P             ++V+ H
Sbjct: 482 AAFYPTQLLVTGFDIL----FFWVARMIMLGCHFMLDVPMPDGSQRSLADAVPFREVYIH 537

Query: 294 GFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +     +K+SK+ GNVIDPIEV+ + G DA+R+ L  + + G D
Sbjct: 538 ALVRDADRQKMSKTKGNVIDPIEVVTKYGTDAVRFTLASQASPGTD 583


>gi|218510283|ref|ZP_03508161.1| leucyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 137

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  QN  + +     + +S D
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLD 121


>gi|305666145|ref|YP_003862432.1| leucyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707643|gb|EAQ99884.1| leucyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 937

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+EK Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  EKEKFYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPMGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
           A   G    +  + N   +R+  D +  S+D    +RT+  +++
Sbjct: 89  AIQTGQHPAITTETNINRYREQLDKIGFSFDWSREVRTSNPKYY 132


>gi|297588297|ref|ZP_06946940.1| leucine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573670|gb|EFH92391.1| leucine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 802

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +EK Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKEKFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  ++  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEIVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            YK       C S    L +E   N      G  G+      N  QWM       +++ Y
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGHCERCG--GEVIRKVKN--QWM------LKITEY 198

Query: 173 QDKLL 177
            D+L+
Sbjct: 199 ADRLI 203



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 26/177 (14%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEKISKSLG 308
           P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+SKS G
Sbjct: 528 PVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYMKRTSHGMILGDNNEKMSKSRG 587

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P +++ + G D LR + +      K   + ++G+K            + V R+  +
Sbjct: 588 NVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENGVKG------CRKFLDKVWRTQEL 641

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +  D +             E + ++  + ++++ E+ +N   + A+AQ+++L++E +
Sbjct: 642 VDGDSNF------------EKMETLVHQTIKKVSEDYENLKFNTAIAQLMTLLNEFN 686


>gi|225010216|ref|ZP_03700688.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005695|gb|EEG43645.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 1134

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F    + P  K V S+G +L K G+K+SK L
Sbjct: 631 KAFPADFIAEGVDQTRGWFYTLHAIATMVF----DRPAYKNVVSNGMVLDKDGKKMSKRL 686

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GN IDP E I   G DA R++++       +  +D +G+
Sbjct: 687 GNAIDPFETIAAHGADATRWYMIANANPWDNLKFDTEGI 725



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVT-----TK 70
           N  P I HA    I D+  R+  + G  V    G D HG  I    + A G+T     TK
Sbjct: 51  NGMPGIHHAMARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPIELGVEKALGITKEDIGTK 110

Query: 71  VFVDQNSRNFR-----------DMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           + V+  ++  R           DM D +   +  ++   T E ++ ++   L K+I  KG
Sbjct: 111 ISVEDYNKACRAAVMRYTDVWNDMTDKIGYWVDMENPYITYEPKYMESVWWLLKEIYKKG 170

Query: 118 DIYKG 122
            IYKG
Sbjct: 171 LIYKG 175


>gi|254450196|ref|ZP_05063633.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264602|gb|EDY88872.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 851

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 12/180 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLATGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADV-----LDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
              G+  K   D   +N  DM        L I +     T +  ++   + L+  + D G
Sbjct: 90  MQTGIHPK---DYTYQNIDDMVAQMKPLGLGIDWSRMFATCDPEYYGQQQSLFIDMLDAG 146

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            I +   +  +   D     +++V  G  G    A+   V+  +   +FF++S Y D+LL
Sbjct: 147 MIDRKNATVNWDPVDMTVLANEQVIDG-KGWRSGAE---VERKDLTQWFFKISDYADELL 202



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 30/176 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +IE+ G D  R+F++ +    +D  +   G      A+      + 
Sbjct: 623 KMSKSKNNVVDPVAIIEQYGADTARWFVLSDSPPERDVEWTASG------AEATFKHLSR 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R    I ++ D       A  + DE++L    + + E+ + +++   + ++A++    
Sbjct: 677 VHRIACDIAENTD-------AANDQDEALLRDMHKAIFEVTQGVESFGFNASIAKLYGFT 729

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + +           K   D   T +       + LA L+    P LA  I+++L
Sbjct: 730 NAIAK----------SKAGSDAKRTAM-------KTLAQLMSPMTPHLAEDIWEML 768


>gi|315657976|ref|ZP_07910850.1| leucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315497012|gb|EFU85333.1| leucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 804

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPRAFTKQNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +++   G D LR + +          + ++GL         +G  
Sbjct: 574 NEKMSKSKGNVVNPDDIVNSHGADTLRLYEMFMGPLDAAIAWSENGL---------DGSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             + R   + + + D +      F ES ++S+  V ++ ++++ E+      + A++Q++
Sbjct: 625 RFLDRVWRLFINEDDSL---SQKFVESNNKSLDKVYNQTVKKVTEDFDTLNFNTAISQLM 681

Query: 419 SLVSEVDRYFDAQKPW 434
             ++E  +  +  +P+
Sbjct: 682 VFINECYKVDEIYQPY 697


>gi|315638284|ref|ZP_07893465.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481631|gb|EFU72254.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 808

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYAIGDALARYYRKMGFNVLHPIGFDSFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY   
Sbjct: 92  KIHPKTWTYENIAYMKKELFSLGFSFSKKRILATSDPIYTKFEQEFFIKMYEKGLIYTKE 151

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               +   D+    +++V    DG+ +   H   Q +   GY+ +++AY
Sbjct: 152 ARVNWCENDQTVLANEQV---EDGKCWRCGHEVSQKV-MPGYYVKITAY 196



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 36/59 (61%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           ++ + G +L  G K+SKS GNV++P ++I++ G D  R F++      K+  ++ D L+
Sbjct: 565 RLLTQGMVLKDGAKMSKSKGNVVNPDDIIKKYGADTARLFILFAAPPAKELEWNDDALE 623


>gi|303249052|ref|ZP_07335296.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489575|gb|EFL49516.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 889

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 12/122 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D     K  F+P  +     DIL F    W A ++  
Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDETKELKT-FYPTTVLSTAFDILFF----WVARMMMM 502

Query: 283 NL----PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L     +P K+V+ H  +   +G K+SKSLGN IDP+ ++++ G DALR+ L    A G
Sbjct: 503 GLHFMKEVPFKEVYIHALVRDAEGRKMSKSLGNGIDPLAMMDQYGTDALRFTLAAFAAMG 562

Query: 337 KD 338
           +D
Sbjct: 563 RD 564



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 31/202 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI------ 58
           S  I  PN     H+GHA  + I D+L R+HR  G +VL+  GTD  G   Q +      
Sbjct: 41  SIVIPPPNVTGALHMGHALNITIQDILCRYHRQRGRNVLWVPGTDHAGIATQNVVERSLA 100

Query: 59  AKAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           AK      +  + F+++  +             R +   +D + + F  T ++      R
Sbjct: 101 AKGVSREAIGREAFIEEVWKWRAEYGGKILNQIRRLGASVDWTRERF--TFDEGLSRAVR 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166
            ++ ++ ++G IY+G Y   +  R      D EV Y    G+ Y+ ++ PV+  E  G F
Sbjct: 159 EVFVRLYEEGLIYRGDYIINWCPRCHTALADLEVEYAPHIGKLYHIRY-PVE--EMPGSF 215

Query: 167 FRLSAYQDKLL---SYYESHPE 185
             ++  + + L   +    HPE
Sbjct: 216 LTIATTRPETLLGDTAVAVHPE 237


>gi|289178528|gb|ADC85774.1| Leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 990

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+  +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 66  RQSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+DD
Sbjct: 126 VQTGQHPRITTEQNIANMRRQLRRMGLSFDD 156


>gi|298529299|ref|ZP_07016702.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510735|gb|EFI34638.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 937

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++         P+ S    +PAD+++ G D  R  FH+    +     + 
Sbjct: 536 ILDVWFDSGTSFAAVLE--KRPECS----FPADMYLEGTDQHRGWFHSSLLASMGTRGSP 589

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HG+++  +G K+SKS+GNVI P E+I++ G + LR ++
Sbjct: 590 PY-KTVLTHGYVVDGEGRKMSKSIGNVIAPQEIIDKYGAEILRIWV 634


>gi|168027896|ref|XP_001766465.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682374|gb|EDQ68793.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 975

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
           L     + KTF    K+  DP  ++  W  +     +  G+ +     KA F+P  +   
Sbjct: 475 LAKAKFAGKTF----KLEQDPD-VLDTWFSSGLFPFSVLGWPEATPDMKA-FYPTSVLET 528

Query: 264 GKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVI 317
           G DIL F    W A ++   L L      K+VF H  +    G K+SKSLGNVIDP+EVI
Sbjct: 529 GHDILFF----WVARMVMLGLKLTGVSPFKQVFLHAMVRDAHGRKMSKSLGNVIDPLEVI 584

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             V ++ L     + +  G     + +  K    AD  NGI    + ++   L  Y
Sbjct: 585 NGVTLEDLH----KRLEQGNLDPREVEKAKAGQKADFPNGIAECGADALRFALVAY 636


>gi|219683757|ref|YP_002470140.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219621407|gb|ACL29564.1| leucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 988

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+  +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RQSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+DD
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLRRMGLSFDD 154


>gi|195495398|ref|XP_002095250.1| GE22294 [Drosophila yakuba]
 gi|194181351|gb|EDW94962.1| GE22294 [Drosophila yakuba]
          Length = 938

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 46/211 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+ + +    G        K K   ADL++ G D  +F   +  + L+S  A  
Sbjct: 559 ILDIWFDSGSTWSAVLG--------KDKI--ADLYLEGYD--QFTGWFQSSLLMSIAARE 606

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P K +F HGF +  KG K+SKSLGNVI P ++ ++ G DALR+++             
Sbjct: 607 CSPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKKYGTDALRWWVASH-GTQHMSITV 665

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQ 399
            D L ++   +L+   G L  R +  ++ D    + +IPT      SD+S L   +R L 
Sbjct: 666 SDKLLQQAAENLSKVRGTL--RYLKGVIGDKQSAEKLIPT------SDKSFL---NRFL- 713

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                         L+Q++   SEV++ ++A
Sbjct: 714 --------------LSQLVEFESEVEKLYNA 730


>gi|187736142|ref|YP_001878254.1| leucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426194|gb|ACD05473.1| leucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 857

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++ARF R++G +VL   G D  G    + A
Sbjct: 41  KPKYYVLDMFPYPSGAGLHVGHPEGYTATDIVARFKRMNGFNVLHPMGWDSFGLPAEQYA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    V   +N  NFR    +L  SYD
Sbjct: 101 IKTGQHPSVTTFRNIDNFRRQLKMLGFSYD 130



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-G 300
           GS       DL+V G +    H +Y   W   L     LS N P  +K+ + G IL + G
Sbjct: 555 GSAGSPGGVDLYVGGTEHAVLHLLYARFWHKVLFDLGYLSTNEPF-QKLVNQGLILGEDG 613

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           +K+SKS GNV++P +++ E G D+LR +
Sbjct: 614 QKMSKSRGNVVNPDDIVREYGADSLRLY 641


>gi|294678720|ref|YP_003579335.1| isoleucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294477540|gb|ADE86928.1| isoleucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 983

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +       D  DG+      ADL++ G D  R  FH+    A       
Sbjct: 589 VLDVWFDSGSTHAFV--LRDREDGTADGI--ADLYLEGTDQHRGWFHSSMLQACATKGRA 644

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKSLGN + P +VI++ G D LR ++ +
Sbjct: 645 PY-RGVLTHGFTLDEKGMKMSKSLGNTVAPADVIKDYGADILRLWVAQ 691



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 12/102 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           R    +     Y N   HIGHA   I+ D + R  ++ G D  +  G D HG  I     
Sbjct: 55  RAPFVLHDGPPYANGHLHIGHALNKILKDFIVRSQQMMGRDARYVPGWDCHGLPIEWKIE 114

Query: 59  ----AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               AK      V T  F  Q  R F +    +DI  ++F R
Sbjct: 115 EQYRAKGLNKDDVDTVSF-RQECRRFAE--GWIDIQREEFKR 153


>gi|92112614|ref|YP_572542.1| isoleucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123084221|sp|Q1R0B5|SYI_CHRSD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91795704|gb|ABE57843.1| Isoleucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 946

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 11/124 (8%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+       +  + P  K + +HGF +  KG K+SKS+GNVI P 
Sbjct: 563 ADLYLEGSDQHRGWFHSSLLTGCAIDGHAPY-KALLTHGFTVDEKGRKMSKSMGNVIAPQ 621

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V++++G D LR ++      G+    D+  + KR  AD+   I N    +   +L + +
Sbjct: 622 QVMDKLGADILRLWVASTDYSGEMAVSDE--ILKR-TADVYRRIRN----TSRFLLANLN 674

Query: 375 GMIP 378
           G  P
Sbjct: 675 GFAP 678



 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           RE   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 48  REVFVLHDGPPYANGSIHIGHAVNKILKDIVVKSKSLAGYDAPYVPGWDCHGLPI 102


>gi|300727074|ref|ZP_07060493.1| valine--tRNA ligase [Prevotella bryantii B14]
 gi|299775618|gb|EFI72209.1| valine--tRNA ligase [Prevotella bryantii B14]
          Length = 899

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 35/247 (14%)

Query: 245 LDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFI 296
           ++NPD  +  ++   ADL V G DI+ F    W A ++ A       +P  K V+  G +
Sbjct: 491 INNPDNEEINYYYPTADL-VTGPDIIFF----WVARMIMAGYEYRGKMPF-KHVYFTGIV 544

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
             K G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N    
Sbjct: 545 RDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLAAPAGNDILFDESLCEQGRN---- 600

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
               N +  +  +I       I  P    E ++  ++     L+ I   MQ Q     ++
Sbjct: 601 --FNNKIWNAFRLIEGWQTADIEQP----EENKIAINWFDAKLKVINAEMQEQFKQYRIS 654

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP----DRASTVLYV----TVEVIRQLAILLQAFVP 467
           + +  V  +  ++D    W L+   P     +A  +  +    T++    L  +L  F+P
Sbjct: 655 EALMTVYRL--FWDEFSAWYLEMIKPAYIDGKAQPIDQITYNSTLQFFETLMKMLHPFMP 712

Query: 468 KLANKIF 474
            +  +++
Sbjct: 713 FITEELW 719


>gi|209965829|ref|YP_002298744.1| leucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|238064871|sp|B6IU54|SYL_RHOCS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209959295|gb|ACI99931.1| leucyl-tRNA synthetase LeuS [Rhodospirillum centenum SW]
          Length = 865

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARFKRAKGFNVLHPMGWDAFGLPAENAAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV    +  +N    R     + ++ D        R   TCR  + +   K  I+   
Sbjct: 91  EKGVHPGKWTYENIATMRGQLQTMGLAID------WSREVATCRPEYYRHEQK--IFLDF 142

Query: 124 YSGWYSLRDEAYYNDDEV 141
                + R E++ N D V
Sbjct: 143 LKAGLAYRKESWVNWDPV 160



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP ++IE  G DA R F++ +    +D  +   G+      D A    N 
Sbjct: 614 KMSKSKKNVVDPQQIIESYGADAARLFMMSDSPPDRDLEWTTAGI------DGAWRYINR 667

Query: 362 VSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R V+    D      P P +F E   +I  +  +  Q+I E+++    + ++A++ S 
Sbjct: 668 LWRLVTEPGFDLPAPGTPAPASFGEEATAIRRLAHKAAQQIGEDIEGFRFNSSVARLRSF 727

Query: 421 VSEV 424
            + V
Sbjct: 728 SNGV 731


>gi|150005574|ref|YP_001300318.1| isoleucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|149933998|gb|ABR40696.1| isoleucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 1162

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEQYGSDPLRWYMITNSSPWDNLKFDTDGV 754


>gi|315283055|ref|ZP_07871330.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613297|gb|EFR87166.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 921

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ ++    PADL++ G D  R  F++    A  ++   
Sbjct: 522 IMDVWFDSGSSHQAVLNA--RPELTR----PADLYMEGSDQYRGWFNSSLTTAVAITGEA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V SHGF L  +G K+SKSLGN + P +VI+++G D +R ++ 
Sbjct: 576 PY-RNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVA 621



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A    GV  K   +
Sbjct: 58  YANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   FR +     ++  +  RT  KR
Sbjct: 115 MSIAEFRKLCAEYAMTQVEGQRTGFKR 141


>gi|291393537|ref|XP_002713327.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 903

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L +  S+D  + T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIKHMRKQLDHLGLWFSWDREVTTCLPDYYRWTQHLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200


>gi|237741055|ref|ZP_04571536.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431099|gb|EEO41311.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 709

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 16/119 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  +G +    PADL++ G D  R  FH     +   + + 
Sbjct: 535 IMDVWFDSGSSH---RGVLEVWEGLRR---PADLYLEGSDQHRGWFHTSLLTSVASTGDS 588

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           P  K V +HGF+   +G K+SKSLGN + P +VI+  G D LR +      CG   + D
Sbjct: 589 PY-KSVLTHGFVNDGEGRKMSKSLGNTVSPEDVIKVYGADILRLW------CGSVDYRD 640



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  AKA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVAKAREMSALEIRKLCEKYARKW------VGIQKEQFIRLGVLGDWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I + G I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203


>gi|228475879|ref|ZP_04060589.1| leucine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270034|gb|EEK11504.1| leucine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 804

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +++   G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             N  G+L ++ V                   +D S+  V ++ ++++ E+      + A
Sbjct: 634 FINEDGSLSNKIVE-----------------NNDNSLDKVYNQTVKKVTEDFDTLNFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  +++  +  +  KP+
Sbjct: 677 ISQLMVFINDCYKANNIYKPY 697



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ V    DG      H PV     + +  +++ Y D+LL  
Sbjct: 150 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            +    PE I  ++R
Sbjct: 205 LDELDWPESIKDMQR 219


>gi|212693401|ref|ZP_03301529.1| hypothetical protein BACDOR_02917 [Bacteroides dorei DSM 17855]
 gi|237726966|ref|ZP_04557447.1| isoleucyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265756529|ref|ZP_06090735.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664045|gb|EEB24619.1| hypothetical protein BACDOR_02917 [Bacteroides dorei DSM 17855]
 gi|229433822|gb|EEO43899.1| isoleucyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|263233717|gb|EEZ19332.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 1162

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEQYGSDPLRWYMITNSSPWDNLKFDTDGV 754


>gi|159044481|ref|YP_001533275.1| isoleucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912241|gb|ABV93674.1| isoleucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 991

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DGS+     ADL++ G D  R  FH+    A       
Sbjct: 597 ILDVWFDSGSTHAFV--LRDREDGSEDGL--ADLYLEGTDQHRGWFHSSMLQACGTMGRA 652

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN + P +V+++ G D LR ++ +
Sbjct: 653 PY-RGVLTHGFTLDAKGNKMSKSVGNTVAPEKVVQQYGADILRLWVAQ 699


>gi|78221572|ref|YP_383319.1| isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78192827|gb|ABB30594.1| Isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 923

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 41/269 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PD-GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+  ++      L+N P+ GS     PA++++ G D  R  FH+    +     
Sbjct: 530 ILDVWFDSGVSH---AAVLENRPELGS-----PANMYLEGSDQHRGWFHSSLLASVGTRG 581

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K+V +HGF++   G K+SKS+GNV+ P EVI++ G + LR ++  +       + 
Sbjct: 582 TAPY-KEVLTHGFVVDGSGRKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQ------DYR 634

Query: 342 DKDGLKKRVNADLANGIGNL--VSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
           D   + + +   LA     +    R +   L D+D    M+P  G  TE D   L     
Sbjct: 635 DDVRISQEILTRLAEAYRRIRNTCRYLLGNLYDFDPATDMVPF-GEMTELDRWALHQL-E 692

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDR---YFDAQKP-WELKKTNPDR--ASTVLYV 450
           VL+E      N+     L   ++    V+    Y D  K  +  +K +P+R  A TV+Y+
Sbjct: 693 VLKEKVFTAYNEYEFHILYHAVNGFCTVEMSAFYLDIIKERYTSRKDSPERRSAQTVMYL 752

Query: 451 TVE-VIRQLAILLQ-------AFVPKLAN 471
            +E ++R +A +L         ++PK A 
Sbjct: 753 VLESLVRLMAPVLSFTADEVWGYMPKRAE 781



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV----TT 69
           Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I  +  +N G     TT
Sbjct: 58  YANGHIHIGHALNKILKDIILKSKRMQGFDAPYVPGWDCHGLPIELQVEKNLGSKKHETT 117

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIR 96
           K+ + +  R + +    + I  D+F R
Sbjct: 118 KLQMRKQCREYAE--KFVKIQRDEFER 142


>gi|328465026|gb|EGF36305.1| leucyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 788

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANANLEKAYHHMVKT 662



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|325841283|ref|ZP_08167384.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489964|gb|EGC92311.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 811

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 28  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRMKRMQGYRVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
            A N G   + F D N   FR+    L  SY  D  + TT+ +++   + ++ ++ + G
Sbjct: 88  YALNTGNDPREFTDININTFRNQIQSLGFSYDWDKELNTTDPKYYKWTQWIFTQLYNMG 146



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISKSLG 308
           P DL++ G +    H +Y   W   L    +   K    ++F+ G IL    EK+SKS G
Sbjct: 530 PVDLYIGGAEHAVLHLLYARFWHKVLYDLGIVETKEPFQRLFNQGMILGENNEKMSKSKG 589

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NV++P +++E  G D LR +
Sbjct: 590 NVVNPDDIVESHGADTLRLY 609


>gi|294778619|ref|ZP_06744041.1| isoleucine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447568|gb|EFG16146.1| isoleucine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 1162

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEQYGSDPLRWYMITNSSPWDNLKFDTDGV 754


>gi|319943191|ref|ZP_08017474.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743733|gb|EFV96137.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 887

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 6/184 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV+ R  R+ G +VL   G D  G     AA 
Sbjct: 35  KGKFYACSMLPYPSGILHMGHVRNYTINDVMYRHLRMSGYNVLMPMGWDAFGLPAENAAL 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N    +     L +S D    + T    ++   + L+ ++ +KG  Y+
Sbjct: 95  KNGVAPAKWTWDNIAYMKQQMQPLGLSIDWSREVATCSPDYYKWNQWLFLRMREKGIAYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V    DG+ + +   PV+  +   Y+ R++ Y  +LL    
Sbjct: 155 KHGTVNWDPVDQTVLANEQV---VDGKGWRSG-APVEKRDIPMYYLRITDYAGELLKEVT 210

Query: 182 SHPE 185
            H E
Sbjct: 211 EHLE 214


>gi|289550486|ref|YP_003471390.1| Leucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180018|gb|ADC87263.1| Leucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 804

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPRAFTKQNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNV++P +++   G D LR + +          + ++GL         +G  
Sbjct: 574 NEKMSKSKGNVVNPDDIVNSHGADTLRLYEMFMGPLDAAIAWSENGL---------DGSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             + R   + + + D +      F ES ++S+  V ++ ++++ E+      + A++Q++
Sbjct: 625 RFLDRVWRLFINEDDSL---SQKFVESNNKSLDKVYNQTVKKVTEDFDTLNFNTAISQLM 681

Query: 419 SLVSEVDRYFDAQKPW 434
             ++E  +  +  +P+
Sbjct: 682 VFINECYKVDEIYQPY 697


>gi|210634098|ref|ZP_03297986.1| hypothetical protein COLSTE_01904 [Collinsella stercoris DSM 13279]
 gi|210158949|gb|EEA89920.1| hypothetical protein COLSTE_01904 [Collinsella stercoris DSM 13279]
          Length = 904

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/320 (20%), Positives = 119/320 (37%), Gaps = 75/320 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYE---------SHPEFILPIERRNEVISFVKSG---- 203
           V W EE G    +  ++  ++  Y          S   F+   + +   +  VK G    
Sbjct: 325 VAWFEEHGLLDHIDEHEHSVMHCYRCDNTLEPWLSEQWFVAVDKLKQPALDAVKDGRVTF 384

Query: 204 ---------------LKDLSLSRKTFDWGIKIP--------------DD----------- 223
                          LKD  +SR+ + WG +IP              DD           
Sbjct: 385 HPARWTDTYTTWMENLKDWCISRQLW-WGHRIPVFYCEDCGWEDACMDDVHVCPTCGGTH 443

Query: 224 ---PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
               + ++  W  +      T G+   P+  +    P    V  +DI+      W A ++
Sbjct: 444 VHQDENVLDTWFSSQLWTFATQGWPQKPEMLEGHH-PTTALVTARDIIAL----WVARMV 498

Query: 281 SANL------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            ++L      P    V     +   G ++SKS GN +DP+++I+  G DA+R+ L+    
Sbjct: 499 MSSLYFLDEVPFKDVVIYPTILAKDGSRMSKSKGNGVDPMDLIDMYGADAMRFNLLTLCT 558

Query: 335 CGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESD 387
             +D  +D D       LK     + A      +  +   +L + DG  P  P A T +D
Sbjct: 559 NNQDVKFDADIDKKTKKLKGSPRTEQARAFVTKIWNASRFLLMNMDGYTPGEPVAKTAAD 618

Query: 388 ESILSVCSRVLQEIRENMQN 407
             + S  ++ ++ + E +++
Sbjct: 619 AWMFSRLAKAVKLVTEGIEH 638


>gi|330501955|ref|YP_004378824.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916241|gb|AEB57072.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 944

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 230 VWIDA-LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+  T++    G   + + + A+   ADL++ G D  R  FH+       +  + P 
Sbjct: 536 VWFDSGTTHWHVLRG--SHAELAHAQGPAADLYLEGSDQHRGWFHSSLLTGCAIDGHAPY 593

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K++ +HGF +  +G K SKSLGNV+ P +VI+ +G D LR ++      G+    D+  
Sbjct: 594 -KELLTHGFTVDEQGRKQSKSLGNVVAPQKVIDSMGADILRLWVASTDYSGEMAVSDQ-- 650

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQE 400
           + +R +AD    I N    +   +L + +G  P      P    + D   L   +R+ +E
Sbjct: 651 ILQR-SADAYRRIRN----TARFMLANLNGFDPARDLLQPAQMLDLDRWALDATARLQEE 705

Query: 401 IRE 403
           I E
Sbjct: 706 IIE 708



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R   + G D  +  G D HG  I
Sbjct: 48  RPKFVLHDGPPYANGSIHIGHALNKILKDIITRSKTMAGFDAPYVPGWDCHGLPI 102


>gi|293374330|ref|ZP_06620657.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646993|gb|EFF64976.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 811

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 28  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRMKRMQGYRVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
            A N G   + F D N   FR+    L  SY  D  + TT+ +++   + ++ ++ + G
Sbjct: 88  YALNTGNDPREFTDININTFRNQIQSLGFSYDWDKELNTTDPKYYKWTQWIFTQLYNMG 146



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISKSLG 308
           P DL++ G +    H +Y   W   L    +   K    ++F+ G IL    EK+SKS G
Sbjct: 530 PVDLYIGGAEHAVLHLLYARFWHKVLYDLGIVETKEPFQRLFNQGMILGENNEKMSKSKG 589

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NV++P +++E  G D LR +
Sbjct: 590 NVVNPDDIVESHGADTLRLY 609


>gi|254884512|ref|ZP_05257222.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319640796|ref|ZP_07995509.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254837305|gb|EET17614.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317387608|gb|EFV68474.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 1162

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEQYGSDPLRWYMITNSSPWDNLKFDTDGV 754


>gi|220905335|ref|YP_002480647.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869634|gb|ACL49969.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 888

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 10/91 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFIL-HKGEKISKSL 307
           +++P  + V G DIL F    W A ++   +     P    V+ H  +    G K+SKS 
Sbjct: 474 RWYPTSVLVTGFDILFF----WVARMMMMGIHFMGKPPFADVYLHALVRDASGRKMSKST 529

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVI+P+E+I++ G DALR+ L    A G+D
Sbjct: 530 GNVINPLEMIDKYGCDALRFTLTAFAAMGRD 560



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 24/154 (15%)

Query: 10  STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI---AKA 61
           S  I  PN     HIGHA  + + DVL R  R  G +VL+  GTD  G   Q +   A A
Sbjct: 40  SIVIPPPNVTGALHIGHALNLTLIDVLCRHARQKGKNVLWVPGTDHAGIATQNVVERALA 99

Query: 62  AQNAG---VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           A+  G   +  + F+D+                R M   +D S   F  T ++      R
Sbjct: 100 AEGKGRKDLGREAFIDRVWEWREDYGHRILDQIRAMGASVDWSRLRF--TMDEGLSAAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++ ++ + G IYKG Y   +  R      DDEV
Sbjct: 158 KVFVQLYNDGLIYKGDYIINWCSRCHTALADDEV 191


>gi|254362636|ref|ZP_04978725.1| isoleucine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153094250|gb|EDN75121.1| isoleucine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 938

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEQRPEFNGNSA-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G          +  V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TG----------EITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   ++       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|314936146|ref|ZP_07843493.1| leucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654765|gb|EFS18510.1| leucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 804

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNV++P +++   G D LR +      L   IA  ++G         RV   
Sbjct: 574 NEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRL 633

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             N  G+L ++ V                   +D S+  V ++ ++++ E+      + A
Sbjct: 634 FINEDGSLSNKIVE-----------------NNDNSLDKVYNQTVKKVTEDFDTLNFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  +++  +  +  KP+
Sbjct: 677 ISQLMVFINDCYKANNIYKPY 697



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ V    DG      H PV     + +  +++ Y D+LL  
Sbjct: 150 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YES--HPEFILPIER 192
            +    PE I  ++R
Sbjct: 205 LDGLDWPESIKDMQR 219


>gi|295093793|emb|CBK82884.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Coprococcus sp. ART55/1]
          Length = 805

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 46/232 (19%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFIL-HKGEKIS 304
           K+W P D +  G +    H +Y   W  FL    + P P   +K  SHG IL   GEK+S
Sbjct: 529 KYWLPVDWYNGGMEHTTLHLLYSRFWHKFLYDQGVVPTPEPYQKRTSHGMILGENGEKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P ++++  G D LR + +   A      + +DG+K                R
Sbjct: 589 KSRGNVVNPDDIVDVYGADTLRTYEMFIGAFDLAASWSEDGVKG-------------CRR 635

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +  + K  D +    G +++  E+ +    +V++++  + +N   + A+A +++L+++ 
Sbjct: 636 FLDRVWKLQDSVTDEKG-YSKDMETKM---HQVIKKVSNDFENLKYNTAIAAMMALLNDF 691

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                       KK +         VT +  + L ILL    P +  +++ +
Sbjct: 692 -----------YKKGS---------VTADEFKTLLILLNPVAPHITEELWSV 723



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      A
Sbjct: 32  KPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENYA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K     N   F+     L  S+  D  I TT+  ++   + ++ K+   G  Y
Sbjct: 92  IKNKIHPKEVTKTNVARFKKQLHSLGYSFDWDREINTTDPEYYKWTQWIFLKLFKAGLAY 151

Query: 121 K 121
           K
Sbjct: 152 K 152


>gi|282856467|ref|ZP_06265744.1| isoleucine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585707|gb|EFB90998.1| isoleucine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 920

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 29/271 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++ +       P  S    WP DL++ G D  R  F      +  ++   
Sbjct: 532 ILDVWFDSGASHFSVMDVPSRPYLS----WPTDLYLEGADQHRGWFQTSLLTSVAVAGKA 587

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGFI+  +G K+SKSL N + P  +    G D LR ++    A  +   +  
Sbjct: 588 PY-RAVLTHGFIVDEQGRKMSKSLQNGVAPERITNRDGADILRLWVAS--ADYRSDVHIS 644

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVL 398
           DG+ K ++ +        +  +   +L + +G  P   +       E D   +S+ +RV+
Sbjct: 645 DGIIKNLSEEYRR-----IRNTARFMLGNLNGFDPARDSVPFDKMPEFDRWAMSLLNRVV 699

Query: 399 QEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPW----ELKKTNPDRASTVLYVTV 452
           + + E  +    H  +  +    V E+   Y DA K      E    +     TV++ TV
Sbjct: 700 ERVTEGFEAYDFHMPITVIHQFCVGELSSFYLDASKDRLYADEANGLSRRACQTVMWKTV 759

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
                LA +L   +   A +I+  L   D +
Sbjct: 760 CA---LARMLAPVISFTAEEIWQQLRTIDAS 787


>gi|198274109|ref|ZP_03206641.1| hypothetical protein BACPLE_00246 [Bacteroides plebeius DSM 17135]
 gi|198273187|gb|EDY97456.1| hypothetical protein BACPLE_00246 [Bacteroides plebeius DSM 17135]
          Length = 944

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKI 113
            A   G    V    N   +R+  D +  S+  D  +RT E  ++   +  ++K+
Sbjct: 88  YAIQTGQHPAVTTAANIARYREQLDKIGFSFDWDREVRTCEPGYYHWTQWAFQKM 142



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 54/276 (19%), Positives = 115/276 (41%), Gaps = 50/276 (18%)

Query: 214 FDWGIKIPDDP-QYIM----------YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           FD GI I ++P Q ++          +V+    TN   + G  D  + +       D+++
Sbjct: 624 FDLGISIKEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLGLKDQYEVTPLH---VDVNI 680

Query: 263 IGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +  D+L   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E  G
Sbjct: 681 VSNDVLDVEAFKNWRPEYHNAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIVERYG 737

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR + +      +   +D +G+         +G+   + +  ++        +P  G
Sbjct: 738 ADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYDRQGTFLPAEG 788

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             T+ +   L    ++++++  +++    + +++  +  V+E+           LK  N 
Sbjct: 789 EATKEE---LKAIHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLKCRNK 836

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       V+  L +LL  F P LA ++++ L
Sbjct: 837 -----------AVMSNLVVLLAPFAPHLAEELWEAL 861


>gi|225019235|ref|ZP_03708427.1| hypothetical protein CLOSTMETH_03188 [Clostridium methylpentosum
           DSM 5476]
 gi|224947866|gb|EEG29075.1| hypothetical protein CLOSTMETH_03188 [Clostridium methylpentosum
           DSM 5476]
          Length = 801

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFIL-HKGEKIS 304
           +W P D +  G +    H +Y   W  FL     +S   P  K+  SHG IL   GEK+S
Sbjct: 523 YWLPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVSCPEPYAKRT-SHGMILGENGEKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P ++I+E G D +R +   E+  G     D +      +A +  G    + R
Sbjct: 582 KSRGNVVNPDDIIKEYGADTMRLY---EMFIG-----DFEKAAPWSSASI-RGCKRFLDR 632

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             ++     DG    P         I     + ++++ E+++    + ALA +++L++ +
Sbjct: 633 VWNLQTCVTDGAGYRP--------EIEGEMHKTIKKVTEDIEALKFNTALAAMMALLNTI 684

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                               +    +T    R L ILL  F P L  +++++L
Sbjct: 685 --------------------TATGSITRGEFRTLLILLNPFAPHLTEELYELL 717



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 3/142 (2%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y      YP+ Q  H+GH       D++AR  RL+G +VL+  G D  G      A  
Sbjct: 32  KYYALVEFPYPSGQGLHVGHPRSYTALDIVARKRRLEGYNVLYPMGWDAFGLPTENFAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  ++  ++N   F+     L +S+D    + TT+  ++   + ++ ++  KG  YK 
Sbjct: 92  NHIHPEIVTEKNVARFKGQLKSLGLSFDWNREVNTTDPSYYHWTQWIFLQLFKKGLAYKK 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKG 144
             +  +    +    ++EV  G
Sbjct: 152 KMAVNWCTSCKCVLANEEVVNG 173


>gi|163790528|ref|ZP_02184957.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159874131|gb|EDP68206.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 746

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D++ R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGNIHIGHALNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKG 117
            +   FR +      + ++   +DF R            T  K + +    ++ K+++KG
Sbjct: 115 MSIAEFRQLCEEYAWEQVNKQKEDFKRLGVAGEWDYPYVTLTKEYEEAQIRVFGKMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 YIYKGLKPIYWSPSSESALAEAEI 198



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAVLRARENLT------FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S G +L   G K+SKS+GN I P +VI+++G D +R ++
Sbjct: 576 PY-KTVLSQGMVLDGDGRKMSKSIGNTIAPSKVIKQMGADIIRLWV 620


>gi|326563969|gb|EGE14219.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 1095

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF            D    I   +  +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGF------------DRTTDIYRRIRNT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMISTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|308466702|ref|XP_003095603.1| CRE-LARS-2 protein [Caenorhabditis remanei]
 gi|308245127|gb|EFO89079.1| CRE-LARS-2 protein [Caenorhabditis remanei]
          Length = 874

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + HIGH     I+D  AR++RL+G +V+   G D  G     AA++ 
Sbjct: 76  KKYILSMFPYPSGRLHIGHMRVYTISDTTARYYRLNGYEVIHPIGWDSFGLPAENAARDK 135

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           GV  + +  +N    ++      I +D
Sbjct: 136 GVDPREWTVKNIETMKEQLVKTKILFD 162


>gi|150402643|ref|YP_001329937.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150033673|gb|ABR65786.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 1034

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 20/205 (9%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +K   HGF L   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +    +
Sbjct: 583 EKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEM 642

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIR 402
            +     + N + N  + S + M+L D+   IP    F    + D  ILS  + V +E  
Sbjct: 643 DE--TRSMLNTLWNSYAFSANYMVLDDF---IPNDEYFKHVKDEDAWILSRINTVAKEAV 697

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDA---QKPWELKKTNPDRAST--VLYVTVEVIR 456
           E ++   +H     +   V ++  R++      + W ++K +  + S    LY    VI 
Sbjct: 698 EALEKPHLHTYTWTLRDFVLNDFSRWYIKLIRDRTW-MEKNDVQKLSAYQTLYY---VIM 753

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
           +L  ++    P ++ +I+  L   D
Sbjct: 754 KLISIMAPVTPHISEEIYQNLKTED 778



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 40 YFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96


>gi|330997282|ref|ZP_08321135.1| leucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329571077|gb|EGG52784.1| leucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 945

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KEKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISD 115
              G    V    N   +R+  D +   +  D  +RT +  ++   +  ++K+ D
Sbjct: 90  IQTGQHPAVTTAANINRYREQLDKIGFCFDWDREVRTCDPAYYHWTQWAFQKMFD 144



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  D+L   A   W      A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSGDVLDIEAFRNWRPEYHDAEFILEDGKYICGWAI---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G    + +  ++        +
Sbjct: 734 EKFGADTLRLYEMFLGPVEQSKPWDTNGI---------DGCHRFLKKFWALFYDRTGNFL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           PT G   E+D+  L    ++++++  +++    + +++  +  V+E+ +    QK   L 
Sbjct: 785 PTEG---EADKESLKSLHKLIKKVTADIEAFSYNTSISAFMICVNELSQ----QKCHNLG 837

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                           ++R L  L+  F P +A +++  L
Sbjct: 838 ----------------ILRTLVTLMAPFAPHIAEELWHAL 861


>gi|237751536|ref|ZP_04582016.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372902|gb|EEO23293.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 827

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 26/203 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI +   YP+   H+GH     I D +AR++R+ G +VL   G D  G      A+
Sbjct: 42  KPKKYILSMFPYPSGAIHMGHVRNYCIGDAMARYYRIYGYNVLHPIGFDAFGM----PAE 97

Query: 64  NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS-------- 114
           NA +  K+   D    N   M   L      F   +++R  +TC  ++ K          
Sbjct: 98  NAAIKHKIHPKDWTYSNMEVMLKELQTMGLSF---SKERVLETCDPIYSKYEQEFFIKAW 154

Query: 115 DKGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            KG +Y K  +  W    D     +++V    DG+ +     PV   E   Y+ +++ Y 
Sbjct: 155 QKGLVYRKKAFLNWCP-NDLTVLANEQV---IDGKCWRCD-TPVVQKEMYQYYLKITDYA 209

Query: 174 DKLLSYYES----HPEFILPIER 192
           ++LL+  ES     P  +L ++R
Sbjct: 210 EELLNDLESLEGKWPPQVLSMQR 232



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKSLGNV++P  +IE  G D  R F++
Sbjct: 583 LLTQGMVLKDGVKMSKSLGNVVEPRHIIESYGADTARLFIL 623


>gi|308233943|ref|ZP_07664680.1| leucyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943955|ref|ZP_08241420.1| leucine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491924|gb|EGF23698.1| leucine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 885

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 8/179 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K Y+     YP+   H+GHA    I DV+AR  R+ G DVL   G D  G     A
Sbjct: 39  KDCPKKYVLEMFPYPSGDLHMGHARNYTIGDVMARQARMRGFDVLHPMGFDAFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N          +  SYD      T +  ++   + ++ K+ +KG +
Sbjct: 99  AIKHHTEPSTWTYSNINQAISTMKRMGFSYDYQRMFNTCDPSYYTWGQWMFIKMWEKGLV 158

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+G     W  +      N+  +    +G+ +       Q  +   ++F+++AY  +LL
Sbjct: 159 YRGNSLVNWCPVCKTVLANEQVI----NGKCWRCD-TISQKKKLSQWYFKITAYAQELL 212



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 29/264 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAF-----LLSANLPLPKKVFSHGFILHK-GEKIS 304
           +F P D ++ G +    H +Y   W        L S + P    +   G +  + G+ +S
Sbjct: 573 RFMPVDNYIGGIEHAILHLLYSRFWTKVMRDLGLCSIDEPF-TNLLCQGMVRDEHGDTMS 631

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGI 358
           KS GNV+ P  VIE  G D LR  ++      KD  +D + ++      KR        +
Sbjct: 632 KSKGNVVPPSSVIEPFGADTLRLAILFIAPPEKDFDWDTEVVQGTNRFLKRAWRLAWQFV 691

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                  +S  +   D ++          E I ++ +  L+  R+  +NQ  + A++ ++
Sbjct: 692 FAARDAGLSTTIVPNDSVLEHTNLTHAEQELIRALHTLGLKCTRDFDKNQF-NTAISAIM 750

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            LV+   + F  Q     +  NP       ++ + +   + +LL    P  A +I+   F
Sbjct: 751 ELVNAASKCFVDQH----ETLNP-------HLALRLAHDIVLLLAPVCPHWAEEIYQQAF 799

Query: 479 VADENRCFQSLDQRLKPGFMLHKT 502
           V D ++ F S+     P F   +T
Sbjct: 800 V-DTSKPFDSIYDASWPVFDEQRT 822


>gi|134045150|ref|YP_001096636.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132662775|gb|ABO34421.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 1034

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 20/205 (9%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +K   HGF L   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +    +
Sbjct: 583 EKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEM 642

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIR 402
            +     + N + N  + S + M+L D+   +P    F    + D  ILS  + V +E  
Sbjct: 643 DE--TRSMLNTLWNSYAFSANYMVLDDF---VPNDEYFKHVKDEDAWILSRINTVAKEAV 697

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDA---QKPWELKKTNPDRAST--VLYVTVEVIR 456
           E ++   +H     +   + ++  R++      + W ++K +  + S    LY    VI 
Sbjct: 698 EALEKPHLHTYTWTLRDFILNDFSRWYIKLIRDRTW-MEKNDVQKLSAYQTLYY---VIM 753

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
           +L  ++    P L+ +I+  L   D
Sbjct: 754 KLISIMAPVTPHLSEEIYQNLKTED 778



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 40 YFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96


>gi|24379039|ref|NP_720994.1| isoleucyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81452146|sp|Q8DVD3|SYI_STRMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24376934|gb|AAN58300.1|AE014900_8 isoleucine-tRNA synthetase [Streptococcus mutans UA159]
          Length = 930

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  +      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVLNTREDLG---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF+L  KGEK+SKS GN+I P +V ++ G + LR ++
Sbjct: 578 PY-KSVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWV 622



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEI-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 116 -------DLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWENPYITLVPKYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYHGAKPVYWSWSSESALAEAEI 198


>gi|331701630|ref|YP_004398589.1| leucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128973|gb|AEB73526.1| leucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 806

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGKNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N + F+     L  SY  D  I TT+  ++   + +++++  +G  
Sbjct: 89  ALKTGHNPRDFTAKNIKTFKRQIRSLGFSYDWDREINTTDPSYYKWTQWIFEELYKRGLA 148

Query: 120 YK 121
           Y+
Sbjct: 149 YE 150



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EK 302
           K K+W P DL+V G +    H +Y   W  FL    +   K+ F    + G IL    EK
Sbjct: 519 KLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGTNHEK 578

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GNVI+P ++++E G D LR +
Sbjct: 579 MSKSKGNVINPDDIVDEYGADTLRVY 604


>gi|261337831|ref|ZP_05965715.1| leucine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277295|gb|EFA23149.1| leucine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 996

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 12/160 (7%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISD----- 115
              G   +V  +QN  N R     + +S+DD     T E  +    + ++ +I D     
Sbjct: 124 VQTGQHPRVTTEQNIANMRRQLHRMGLSFDDRRSFATIEPGYVRWTQWIFSRIYDSWYDA 183

Query: 116 ---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
                   KGC      L DE + +      G +GQ +++
Sbjct: 184 EATNPSGTKGCARPISELEDE-FRSGKRAIPGHEGQAWDS 222


>gi|254440649|ref|ZP_05054142.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198250727|gb|EDY75042.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 1008

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D  DGS+     ADL++ G D  R  FH+            
Sbjct: 616 ILDVWFDSGSTHAFT--LRDRADGSEDGL--ADLYLEGTDQHRGWFHSSMLQGCGTIGRA 671

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P +++++ G D LR ++ +
Sbjct: 672 PY-RGVLTHGFTLDEKGMKMSKSIGNTIVPEKIVQQYGADILRLWVAQ 718



 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 77  YANGHLHIGHALNKILKDMVVRSQQMMGKDARYIPGWDCHGLPI 120


>gi|167516418|ref|XP_001742550.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779174|gb|EDQ92788.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1182

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           K +PAD    G D  R  F+ +   + LL    P  K +  +G +L   G+K+SK L N 
Sbjct: 539 KNFPADFIAEGVDQTRGWFYTLMVISTLLFDQPPW-KNLIVNGLVLAGDGKKMSKRLKNY 597

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKK-------------RVNADLAN 356
            DP  V+EE G DALR +L+   A   +   +++ G++              R     A 
Sbjct: 598 PDPNLVLEEDGADALRLYLITSPAVRAENLRFERKGVQALIKDVFLPWLNAFRFFEQQAE 657

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                V R  +     +D     P    + D+ IL+    +++ +++ M    ++  + +
Sbjct: 658 RWKQAVGRPFT-----FDSAKACPST-NKMDKWILAFTQDLIRFVKQEMAAYRLYTVVPK 711

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++S V  +  +F       LK  N  D A+  L+   EV+  +++ +  F P  A  ++
Sbjct: 712 LLSFVDNLTNWFIRFNRKRLKGANSDDDAALALWALGEVLMTMSVTMGPFTPFFAEWMY 770


>gi|218562403|ref|YP_002344182.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|12585353|sp|Q9PPE4|SYV_CAMJE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|112360109|emb|CAL34903.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315928297|gb|EFV07613.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 870

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL--SANL--PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  S N+   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|260913216|ref|ZP_05919698.1| isoleucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632803|gb|EEX50972.1| isoleucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 932

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +     D P+ +  +   AD+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYFSVVK--DRPEFNNNE---ADMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATDNKAPYKQVLTHGFTVDEKGYKMSKSLGNVILPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+  + N  G+   R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHKILNSAGDTYRRIRNTARFLLANLNGFDPKRDLVKPEEMMVL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +    +   EI++   N   H  + +++   S
Sbjct: 686 DRWAVDCALQTQNEIKDAYDNYQFHAVVQRLMKFCS 721


>gi|212712946|ref|ZP_03321074.1| hypothetical protein PROVALCAL_04044 [Providencia alcalifaciens DSM
           30120]
 gi|212684424|gb|EEB43952.1| hypothetical protein PROVALCAL_04044 [Providencia alcalifaciens DSM
           30120]
          Length = 860

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +    +L   YD    + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKGQLKMLGFGYDWNREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG  +      V+  E   +F +++ Y ++LL+   
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCDSQ-VERKEIPQWFIKITDYAEELLNDLD 207

Query: 179 YYESHPEFILPIER 192
             E  PE +  ++R
Sbjct: 208 KLEDWPEQVKTMQR 221


>gi|163815524|ref|ZP_02206897.1| hypothetical protein COPEUT_01689 [Coprococcus eutactus ATCC 27759]
 gi|158449161|gb|EDP26156.1| hypothetical protein COPEUT_01689 [Coprococcus eutactus ATCC 27759]
          Length = 821

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 46/232 (19%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFIL-HKGEKIS 304
           K+W P D +  G +    H +Y   W  FL    + P P   +K  SHG IL   GEK+S
Sbjct: 545 KYWLPVDWYNGGMEHTTLHLLYSRFWHKFLYDQGVVPTPEPYQKRTSHGMILGENGEKMS 604

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P ++++  G D LR + +   A      + +DG+K                R
Sbjct: 605 KSRGNVVNPDDIVDVYGADTLRTYEMFIGAFDLAASWSEDGVKG-------------CRR 651

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +  + K  D +    G +++  E+ +    +V++++  + +N   + A+A +++L+++ 
Sbjct: 652 FLDRVWKLQDSVTDEKG-YSKDMETKM---HQVIKKVSNDFENLKYNTAIAAMMALLNDF 707

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                       KK +         VT +  + L ILL    P +  +++ +
Sbjct: 708 -----------YKKGS---------VTADEFKTLLILLNPVAPHITEELWSV 739



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      A
Sbjct: 48  KPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENYA 107

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K     N   F+     L  S+  D  I TT+  ++   + ++ K+   G  Y
Sbjct: 108 IKNKIHPKEVTKTNVARFKKQLHSLGYSFDWDREINTTDPEYYKWTQWIFLKLFKAGLAY 167

Query: 121 K 121
           K
Sbjct: 168 K 168


>gi|116072087|ref|ZP_01469355.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065710|gb|EAU71468.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 973

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 10/93 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       DN        +PADL++ G D  R  F +    +  ++ + P
Sbjct: 555 MDVWFDSGSSWAAVASQRDNLS------YPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
             ++V +HGF L  KG K+SKSLGNV+DP+ +I
Sbjct: 609 Y-QRVLTHGFALDEKGRKMSKSLGNVVDPMVII 640


>gi|78185627|ref|YP_378061.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169921|gb|ABB27018.1| Isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 973

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 10/93 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       DN        +PADL++ G D  R  F +    +  ++ + P
Sbjct: 555 MDVWFDSGSSWAAVASQRDNLS------YPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
             ++V +HGF L  KG K+SKSLGNV+DP+ +I
Sbjct: 609 Y-QRVLTHGFALDEKGRKMSKSLGNVVDPMVII 640


>gi|47097505|ref|ZP_00235046.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|293596567|ref|ZP_05262346.2| leucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|47014120|gb|EAL05112.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|293590315|gb|EFF98649.1| leucyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 841

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 556 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 615

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 616 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 675

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 676 GTLAEKVTTDANANLEKAYHHMVKT 700



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 185

Query: 119 IYKG 122
            Y+ 
Sbjct: 186 AYEA 189


>gi|326797979|ref|YP_004315798.1| leucyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326548743|gb|ADZ77128.1| leucyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 927

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 14/183 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +DV +R+ RL G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDVFSRYKRLRGYNVLHPMGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G    +  + N + +R+  D +  S+D    + E R  D     W +      I+ 
Sbjct: 89  AIQTGQHPAITTETNIKRYREQLDNIGFSFD---WSREIRTSDPSYYKWTQW-----IFM 140

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
             ++ +Y+   +   + D++      KG+ G       + +++  EE + F     + +L
Sbjct: 141 QLFNSFYNTDSDKAESVDQLIRIFETKGSKGIEAVCDEDVLEFTAEEWHHFSEEQKETEL 200

Query: 177 LSY 179
           L Y
Sbjct: 201 LKY 203


>gi|323359815|ref|YP_004226211.1| leucyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323276186|dbj|BAJ76331.1| leucyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 857

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 17/183 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + Y+     YP+   H+GHA   + +D++ARF R  G +VL   G D  G     AA
Sbjct: 41  KRPRKYVLAMFPYPSGDLHMGHAENYLYSDIVARFWRHRGYNVLNPIGWDSFGLPAENAA 100

Query: 63  QNAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              G      T   + Q   + +D     D S    + T++  ++   + L++K+ +KG 
Sbjct: 101 IKRGADPVEWTYANIAQQKASLKDYGVSFDWSR--VLHTSDPEYYRWNQWLFQKLYEKGL 158

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            Y K     W  + D+    +++V      +   A   +    QW      F R++ Y D
Sbjct: 159 AYRKDALVNWDPV-DQTVLANEQVLPDGTSERSGAVVVKKKLTQW------FLRITDYAD 211

Query: 175 KLL 177
           +LL
Sbjct: 212 RLL 214



 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 34/237 (14%)

Query: 250 GSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP--------KKVFSHGFILHKG 300
           G +A  W P D ++ G +    H +Y   F+  A   +           + + G ++  G
Sbjct: 562 GREASKWGPVDFYIGGVEHAILHLLY-ARFITKALFDMGLVEFTEPFSSLINQGMVILDG 620

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN++   E ++  G DALR      +A    G  + D   K  N     G   
Sbjct: 621 AKMSKSKGNLVLFQEELDAHGADALR------VALAFAGPVEDD---KDWNDVSTTGAAK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R++  I  D D    T   + E D+S+  V  R+L E    ++    +  +A+++ L
Sbjct: 672 FLARALR-IAHDVDS--ETDVVWAEGDQSLRRVTHRLLAEAPNLIEQTKFNVVVARLMEL 728

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+   +  D              A T      E    +A+ L  F P  A +++  L
Sbjct: 729 VNATRKAIDGS------------AGTSDPAVREAAEVIAMTLDLFAPHTAEEMWQTL 773


>gi|258612176|ref|ZP_05268358.2| leucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|258609257|gb|EEW21865.1| leucyl-tRNA synthetase [Listeria monocytogenes F6900]
          Length = 806

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 641 GTLAEKVTTDANANLEKAYHHMVKT 665



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKG 122
            Y+ 
Sbjct: 151 AYEA 154


>gi|290580940|ref|YP_003485332.1| isoleucine-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997839|dbj|BAH88440.1| isoleucine-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 930

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  +      +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVLNTREDLG---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF+L  KGEK+SKS GN+I P +V ++ G + LR ++
Sbjct: 578 PY-KSVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWV 622



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEI-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+AD LD+     +   +K+  D  R+                       ++ 
Sbjct: 116 -------DLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWENPYITLVPKYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYHGAKPVYWSWSSESALAEAEI 198


>gi|254832063|ref|ZP_05236718.1| leucyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 803

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANANLEKAYHHMVKT 662


>gi|154250743|ref|YP_001411567.1| isoleucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154154693|gb|ABS61910.1| isoleucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 965

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +       P  K+V +HGF +  KG K+SKSLGNVI P
Sbjct: 590 PADLYLEGSDQHRGWFQSSLLESCGTRGRAPY-KQVLTHGFTMDEKGRKMSKSLGNVIAP 648

Query: 314 IEVIEEVGVDALRYFLV 330
            +++E+ G D LR ++ 
Sbjct: 649 QKIVEQNGADILRLWVA 665



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K RE   +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  KGRETFILHDGPPYANGNIHIGHALNKILKDVVVRSQQMMGKDAAYVPGWDCHGLPI 110


>gi|313890809|ref|ZP_07824434.1| isoleucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120910|gb|EFR44024.1| isoleucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 933

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       DN        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNARDNLS------YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L  KGEK+SKS GN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGKGEKMSKSKGNTILPSDVTKQYGAEILRLWVT 623



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRAKSMSGYQAPYVPGWDTHGLPIEQVLAKKGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL----WKK------------------ 112
              R   D+A  L++  D  +   EK+  D  R+     W K                  
Sbjct: 111 --KRKEMDLAQYLEMCRDYAMSQVEKQREDFKRLGVSADWDKPYITLMPEYEANQIRVFG 168

Query: 113 -ISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|86150255|ref|ZP_01068482.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597514|ref|ZP_01100748.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|85839371|gb|EAQ56633.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190106|gb|EAQ94081.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|284926021|gb|ADC28373.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929651|gb|EFV08831.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 870

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL--SANL--PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  S N+   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|322436941|ref|YP_004219153.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164668|gb|ADW70373.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 960

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 26/107 (24%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------------------LSANLPLPKKVFS 292
           A F+P DL V G DIL F    W A +                    L+ ++P  ++V+ 
Sbjct: 512 ASFYPTDLLVTGFDILFF----WVARMIMLGTHFMQEVPNADGTPRTLADSVPF-REVYI 566

Query: 293 HGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           H  +     +K+SK+ GNVIDPIE+I + G DA+R+ L  + + G D
Sbjct: 567 HALVRDADRQKMSKTKGNVIDPIEIITKYGTDAVRFTLASQASPGTD 613



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAAQNAGVTTKVFVDQN 76
           HIGH  E    D+L R+HR+ G   L+  GTD  G      + K     G TT+  + + 
Sbjct: 63  HIGHMLEHTEMDILTRWHRMSGETALWVPGTDHAGIATQLMVEKQLAAEGKTTRAELGRE 122

Query: 77  -----------------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                            +   R + D +D S + F    +  H  T   +  ++ ++G I
Sbjct: 123 AFVARVWEWKQKYGSAITDQMRRLGDSVDWSREYFTMDDDLSHAVTEAFV--RLHEQGLI 180

Query: 120 YKGCY 124
           Y+G Y
Sbjct: 181 YRGAY 185


>gi|189459409|ref|ZP_03008194.1| hypothetical protein BACCOP_00032 [Bacteroides coprocola DSM 17136]
 gi|189433866|gb|EDV02851.1| hypothetical protein BACCOP_00032 [Bacteroides coprocola DSM 17136]
          Length = 1162

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEKFGSDPLRWYMITNSSPWDNLKFDTDGV 754


>gi|148358880|ref|YP_001250087.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106927|ref|YP_003618627.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166231618|sp|A5IBJ1|SYL_LEGPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148280653|gb|ABQ54741.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648828|gb|ADG24675.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 823

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +AK+W P D ++ G +    H +Y   F        L++++ P  K + + G +L  G K
Sbjct: 517 RAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNSDEPF-KALLTQGMVLKDGHK 575

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGNV+DP  +I   G D  R F++
Sbjct: 576 MSKSLGNVVDPNHLINTYGADTARLFVM 603



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 6/185 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++    L  +YD    + T +  ++   +  + ++ +KG +YK
Sbjct: 92  KNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKRELTTCDPEYYRWEQWFFIRLFEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +F ++++Y D+LLS  +
Sbjct: 152 KNAVVNWDPVDQTVLANEQV---VDGRGWRSG-ALVERKEISQWFIKITSYADELLSSLD 207

Query: 182 SHPEF 186
           S  E+
Sbjct: 208 SLDEW 212


>gi|57237620|ref|YP_178868.1| valyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819531|sp|Q5HV17|SYV_CAMJR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57166424|gb|AAW35203.1| valyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058229|gb|ADT72558.1| Valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 870

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL--SANL--PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  S N+   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|108804372|ref|YP_644309.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765615|gb|ABG04497.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 853

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 37/172 (21%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------DDPQ 225
           + P   R E I ++++ + D ++SR+ + WG +IP                      DP 
Sbjct: 394 VYPDSWRRETIRWLEN-IHDWNVSRQLW-WGHRIPVWYGPEGEVVASKEPPGEGWRQDPD 451

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL----- 280
            I+  W  +      T G+ +   G    F+P  L    ++I+      W A ++     
Sbjct: 452 -ILDTWFSSALWPFATLGWPER-TGDLEYFYPTSLLSTAREIMYL----WVARMIMMGLR 505

Query: 281 -SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +  +P  +KV  H  +L   G K+SKS GNVIDP+++ EE G DA+R+ L+
Sbjct: 506 FTGEVPF-RKVNVHSIVLASDGTKMSKSKGNVIDPLDLFEEYGTDAVRFGLL 556


>gi|139436956|ref|ZP_01771116.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
           25986]
 gi|133776603|gb|EBA40423.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
           25986]
          Length = 925

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 14/109 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---AN 283
           I+ VW D+  ++     Y    +      +PAD+++ G D    H  ++ + LL+   AN
Sbjct: 537 ILDVWWDSGVSWKAVCEYRPELE------YPADVYLEGSDQ---HRGWFQSSLLTSVGAN 587

Query: 284 LPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P K V S GF L  +G K+SKSLGNVIDP +V +E+G D +R ++ 
Sbjct: 588 GHAPYKAVVSQGFTLDGQGRKMSKSLGNVIDPNKVCDEMGADIIRLWVA 636



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 18/135 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   HIGHA   I  D++ R+  + G +V +  G D HGQ I    + 
Sbjct: 42  KKFVLHDGPPYANGPIHIGHAMNKISKDMINRYWMMQGYEVPYVPGWDCHGQPIEHKVEE 101

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI 108
             + T+ F   ++   R++ +   +   +  +   +R                 HD   I
Sbjct: 102 K-LGTEKFNQTSTAKIRELCNKFAVENIELQKAGFRRLGVLGDWDNPYLTLYHQHDAADI 160

Query: 109 -LWKKISDKGDIYKG 122
            ++K + DKG IY+G
Sbjct: 161 EVFKAMFDKGMIYRG 175


>gi|119716116|ref|YP_923081.1| leucyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|189030304|sp|A1SHV9|SYL_NOCSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119536777|gb|ABL81394.1| leucyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 848

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 35/244 (14%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y + P D  KAK W PAD++V G +    H +Y   F        +L  + P   +  + 
Sbjct: 547 YTEGPFDVEKAKAWMPADIYVGGVEHAVLHLLYARFFTKVLRDMGMLEVDEPFAAQ-LNQ 605

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G ++++G+K+SKSLGN +   + + E GVDA+R  LV       D  +          AD
Sbjct: 606 GIVINQGKKMSKSLGNGVSLGDQLAEFGVDAVRVTLVFAGPPEDDIDW----------AD 655

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           ++        +    +  D      TP A    D ++  V +R + +  E +++   +  
Sbjct: 656 VSPAGALRFLQRAWRLSGDVTSEAGTPAAG--GDVALRRVTARTVHDAAELIESYRFNVM 713

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+V+ LV+   +  D           P  A   +    E +   AILL    P +A ++
Sbjct: 714 VARVMELVNATRKAIDGA---------PGPADPAVREATETV---AILLSLVAPYVAEEM 761

Query: 474 FDIL 477
           ++ L
Sbjct: 762 WERL 765



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           REK Y  T   YP+   H+GHA    + DV+AR+    G +VL   G D  G     AA 
Sbjct: 59  REKKYALTMFPYPSGDLHMGHAEVTALHDVVARYWWQRGYEVLNPMGWDSFGLPAENAAI 118

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              ++    T   ++    +F+  A   D S    + T++  ++   + L+ K  ++G  
Sbjct: 119 RNDEHPATYTYANIETQYESFKRYAVSFDWSRR--LHTSDPEYYRWTQWLFLKFRERGLA 176

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +   D+    +++V    DG+        V   E   ++F+++ Y  +LL
Sbjct: 177 YRKSSPVNWCPNDQTVLANEQV---VDGRCERCGAE-VTKRELTQWYFKITDYAQELL 230


>gi|284802052|ref|YP_003413917.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995194|ref|YP_003416962.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057614|gb|ADB68555.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060661|gb|ADB71600.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 806

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 641 GTLAEKVTTDANANLEKAYHHMVKT 665



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 33  KENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQYA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G  Y
Sbjct: 93  IDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGLAY 152

Query: 121 KG 122
           + 
Sbjct: 153 EA 154


>gi|149193818|ref|ZP_01870916.1| valyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135771|gb|EDM24249.1| valyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 858

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSL 307
           +F+P +L + G DIL F    W A ++       K+V      LH       G+K+SKS 
Sbjct: 476 RFYPNNLLITGFDILFF----WVARMMMMGTHFLKEVPFKDVYLHALVRDEHGQKMSKSK 531

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP+E+IE+   D LR+ L      G+D
Sbjct: 532 GNVIDPLEMIEKYSADILRFTLAVLAVQGRD 562



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 22/148 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---------QKIAKAAQNAGVTTKV 71
           HIGHA    + D++ R+ R+DG   L+  GTD  G         Q +A+      +  + 
Sbjct: 47  HIGHALTFTLQDIIVRYKRMDGYATLWQPGTDHAGIATQNVVEKQILAEGKTKEELGREE 106

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+ +            +   R +      S + F  T ++      R+ +KK+ D+G I 
Sbjct: 107 FLKRVWKWKEFSGGKITTQLRRLGASPAWSRERF--TMDEGLQRAVRVAFKKLYDEGLIV 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           KG Y   +  +D A  + +  Y+  +G+
Sbjct: 165 KGNYMVNWCPKDGALSDIEVEYETHEGK 192


>gi|308801771|ref|XP_003078199.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116056650|emb|CAL52939.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1076

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 20/130 (15%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKS 306
           A+F+P  L   G DIL     +W A ++   + L  KV      LH       G K+SKS
Sbjct: 619 AEFYPTSLLETGHDIL----FFWVARMVMMGMKLTGKVPFKQVYLHAMVRDAHGRKMSKS 674

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN---ADLANGIGNLVS 363
           LGNVIDP+ VIE + + AL   L+        G  D+  +KK      AD   GI    +
Sbjct: 675 LGNVIDPLHVIEGIDLAALNATLL-------GGNLDEKEVKKATQAQKADFPEGIPECGT 727

Query: 364 RSVSMILKDY 373
            ++   L  Y
Sbjct: 728 DAMRFALVSY 737


>gi|33326393|gb|AAQ08614.1| Leusyl-tRNA synthetase [Agrobacterium vitis]
          Length = 878

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +   N  + R     + +S D   +F  T +  ++   + L+  + +KG +Y
Sbjct: 93  QNKVHPKDWTYPNIASMRAQLKSMGLSLDWSREFA-TCDVEYYQRQQYLFLDMMEKGLVY 151

Query: 121 K 121
           +
Sbjct: 152 R 152



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 43/228 (18%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PAD+ V   D  R       AFLLS+              +   EK+SKS  NVIDP ++
Sbjct: 604 PADIRVEDVDGTRR------AFLLSSG---------EEVTIGSVEKMSKSKKNVIDPDDI 648

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGNLVSRSVSMIL 370
           +   G D  R+F++ +    +D  + + G++      +R+   L +   N++  S S   
Sbjct: 649 LGSYGADTARFFVLSDSPPDRDVIWSEAGIEGSHRFVQRL-WRLISEAANVLRTSASTPA 707

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           KD  G             ++     + LQ +  ++     ++A+A++  L++ +      
Sbjct: 708 KDGPG------------RAVSQAAHKTLQAVGADLDKLAFNKAVARIYELLNTLAA---- 751

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAI-LLQAFVPKLANKIFDIL 477
                L +     A T     V    ++ I ++   +P LA + + +L
Sbjct: 752 ----PLTQVASGNADTSFVAAVRNATEILIQIIAPMMPHLAEECWAVL 795


>gi|313157288|gb|EFR56713.1| isoleucine--tRNA ligase [Alistipes sp. HGB5]
          Length = 1133

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 30/237 (12%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F  ++  A +L  ++   K + S+G +L K G K+SK LGN +D
Sbjct: 631 YPADFIAEGVDQTRGWFFTLHAIASMLFDSVAF-KNIISNGLVLDKNGNKMSKRLGNGVD 689

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRSVSMI 369
           P EV+   G DA R++++       +  +D+DG   ++++    L N      + S   +
Sbjct: 690 PFEVLATYGADATRWYMISNSQPWDNLKFDRDGVDEVRRKFFGTLYN------TYSFFAL 743

Query: 370 LKDYDGM------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             + DG       +P      E D  I+S+ + +++++  ++++     A   +   V E
Sbjct: 744 YANVDGFTGREPEVPVEKR-PEIDRWIISLLNTLVRDVTRSLEDYDPTPAARAIQEFVGE 802

Query: 424 -VDRYF---DAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++   + ++ W     N D+  A   LY  +E +  LA     F P ++++IF
Sbjct: 803 NLSNWYVRLNRKRFWG-GGMNEDKLAAYQTLYTCLETVSMLA---APFAPFISDRIF 855



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTT-----K 70
           N  P I H     I DV  R+    G  V    G D HG  +    +   G+T      K
Sbjct: 51  NGTPGIHHVMARTIKDVFCRYKTQQGYLVHRKAGWDTHGLPVELGVEKKLGITKEDIGKK 110

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIR-------------TTEKRHHDTCRILWKKISDKG 117
           + +++ +R  R+        ++D  R             T + ++ +T   L K++ DKG
Sbjct: 111 ITIEEYNRTCREAVMEFTGMWEDLTRKMGYWVNMDDPYITYDNKYIETLWWLLKQLFDKG 170

Query: 118 DIYKG 122
            +YKG
Sbjct: 171 LLYKG 175


>gi|289522932|ref|ZP_06439786.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503956|gb|EFD25120.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 927

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           I  VW D+ T++   LTT   L          WPA +++ G D  R  F      +    
Sbjct: 529 IFDVWFDSGTSHMAVLTTRPELK---------WPATMYLEGSDQHRGWFQTSLLTSVATR 579

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  + V +HGFI+  +G K+SKSLGNV+ P EVI + G D LR ++ 
Sbjct: 580 GRAPF-EMVLTHGFIVDGEGRKMSKSLGNVVQPQEVIGKYGADILRLWVA 628


>gi|325285495|ref|YP_004261285.1| Valyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324320949|gb|ADY28414.1| Valyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 877

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 33/241 (13%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHKGE 301
           P+  + K++ P +  V G DIL F    W A ++ A          + V+  G +  K  
Sbjct: 479 PENEEIKYYYPTNDLVTGPDILFF----WVARMIVAGYEYKDQKPFENVYLTGLVRDKQR 534

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN  D +++IEE G D +R  L+   A G D  +D+   ++  N   AN I N
Sbjct: 535 RKMSKSLGNSPDALKLIEEYGADGVRVGLLLSSAAGNDLMFDEALCQQGKN--FANKIWN 592

Query: 361 LVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
                   ++K ++   I  P A     E   +  ++ L EI ++     I  AL  +  
Sbjct: 593 GFR-----LIKGWEVADIAQPEASKIGLEWYNAKFNKTLLEIEDHFSKYRISDALMAIYK 647

Query: 420 LVSEVDRYFDAQKPWELKKTNP------DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           LV      +D    W L+   P      DR +    +T  V  Q   LL  F+P L  ++
Sbjct: 648 LV------WDDYSSWLLEIVKPAYQQPIDRTTYNALIT--VFEQNLKLLHPFMPFLTEEV 699

Query: 474 F 474
           +
Sbjct: 700 W 700


>gi|294791536|ref|ZP_06756693.1| leucine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458007|gb|EFG26361.1| leucine--tRNA ligase [Scardovia inopinata F0304]
          Length = 991

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 8   YISTAI-AYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y + A+  YP+ +  H+GH    I  DV+AR+HR+ G +VL T G D  G    + A   
Sbjct: 62  YFAMAMFPYPSGKGLHVGHPLGYIATDVMARYHRMKGENVLHTMGYDAFGLPAEQYAVQT 121

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           G   ++  +QN  N +     + +S+D
Sbjct: 122 GQHPRITTEQNIANMKRQLHRMGLSFD 148


>gi|255971457|ref|ZP_05422043.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256957096|ref|ZP_05561267.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077892|ref|ZP_05572253.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|255962475|gb|EET94951.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256947592|gb|EEU64224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985922|gb|EEU73224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|323480242|gb|ADX79681.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 928

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 524 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 578 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 630

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 631 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 686

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 687 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 746 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 777



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 60  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 119

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 120 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 180 KGLKPIYWSPSSESSLAEAEI 200


>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 962

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 20/175 (11%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDP 224
           R  A+   +  +Y  + + I+  E  N V    +    ++   R+  D    G   P  P
Sbjct: 494 RQRAWGVPIPVFYAENGDPIITDETINHVADLFRENGSNVWFEREAKDLLPEGFTHPSSP 553

Query: 225 QY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
                    IM VW D+ +++      L+  +  +    PADL++ G D  R  F++   
Sbjct: 554 NGEFRKETDIMDVWFDSGSSH---QAVLEEREDLQR---PADLYLEGSDQYRGWFNSSLS 607

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A  ++   P  K V SHGF+L  +G K+SKS+GN++ P ++++++G D LR ++
Sbjct: 608 TAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV 661



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 99  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 155

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W +                   ++ 
Sbjct: 156 MTVAEFRKLC--AEYAYEQVNRQREQFKRLGVRADWDRPYITLEPAYEAQQIKVFGEMAK 213

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 214 KGYIYKGQKPVYWSPTSESALAEAEI 239


>gi|268590406|ref|ZP_06124627.1| leucine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314320|gb|EFE54773.1| leucine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 860

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     + DV++R+ RL G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTMGDVISRYQRLLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKMLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
              +  +   D     +++V    DG  +     PV+  E   +F +++ Y ++
Sbjct: 152 KTSAVNWCPHDLTVLANEQV---VDGCCWRCD-TPVERKEIPQWFIKITDYAEE 201


>gi|224532167|ref|ZP_03672799.1| isoleucyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511632|gb|EEF82038.1| isoleucyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 1042

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 9/229 (3%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVI 311
           +PAD    G D  R    ++   +L A+L      K V  +G +L   G K+SKS  N  
Sbjct: 546 FPADFIAEGLDQTR--GWFYTLTILGASLFESTAFKNVIVNGLVLSSDGRKMSKSFKNYT 603

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI   G DALR +L+       D     D   + V  ++   I N  S   +  + 
Sbjct: 604 DPMKVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAII 663

Query: 372 DYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           D       P     +  D+ I+S    +   + + +    + +++  ++  + +++ ++ 
Sbjct: 664 DKFKPPKNPNLVKNNTLDKWIISEIESLKNTLNKEIDKYNLTKSIESLLEFIDKLNNWYI 723

Query: 430 AQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
            +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 724 RRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|87301916|ref|ZP_01084750.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283484|gb|EAQ75439.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 997

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 22/123 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK---------FWPADLHVIGKDILR--FHAIYWP 276
           M VW D+ +++    G L   D S             +PADL++ G D  R  F +    
Sbjct: 557 MDVWFDSGSSWAGVLGGLHAGDASGQAPVAAEATPLRYPADLYLEGSDQHRGWFQSSLLT 616

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALR 326
           +  ++ + P  ++V +HGF L  KG K+SKSLGNV+DP  ++E           G D LR
Sbjct: 617 SVAVNGHAPY-RRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKNEKQQPAYGADVLR 675

Query: 327 YFL 329
            ++
Sbjct: 676 LWV 678


>gi|321309739|ref|YP_004192068.1| isoleucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801583|emb|CBY92229.1| isoleucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 869

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           ADL++ G D LR          L++   LP K + +HGF L   G K+SKS GNVIDPIE
Sbjct: 532 ADLYLEGFDQLRGWFNSSSVISLTSQKELPFKNIIAHGFALDGNGNKMSKSKGNVIDPIE 591

Query: 316 VIEEVGVDALRYFLV 330
           +  + G+D LR ++ 
Sbjct: 592 IANKYGIDILRLWIA 606


>gi|224531644|ref|ZP_03672276.1| valyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511109|gb|EEF81515.1| valyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 875

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G +   DP  ++  W  +     ++ G+  N       ++P +  +   DI+ F    W 
Sbjct: 439 GKRFVQDPD-VLDTWFSSWLWPFSSLGW-PNVTSDFKNYYPTNTLITAYDIIFF----WV 492

Query: 277 AFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++ A L    +V F   +I       +G+K+SKSLGN IDP+++I E G D+LR+ L 
Sbjct: 493 ARMVMAGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLS 552

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G+D   + D       A  AN + N  S+ + + LK+ +  I     F + D+ +
Sbjct: 553 FLSVQGQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRE--ILNDLKFNDIDKWL 607

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           L+  +  +  +  +  N   + A   +         D Y +  K  +L   N D  +  +
Sbjct: 608 LTSLNSTILGVESSFANYKYNEASKFIYEFFWNDFCDWYIEISKI-DLNSENVDIQNMAI 666

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
              +  +++  ++L  F+P +  KI+
Sbjct: 667 SKLLFFLKKALLILHPFIPFVTEKIY 692



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 45/162 (27%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA   ++ DVL R+ R+   + L+  GTD           +AG+ T+   ++  +N 
Sbjct: 52  HMGHALNFVLQDVLVRYKRMKKHNTLWLFGTD-----------HAGIATQAVFERYLKNI 100

Query: 81  RDMADVLDISYDDFIRTTEK---RHHDT-------------------------CRI---L 109
               D  D   ++ I+   K   +H D                          C+    +
Sbjct: 101 GKSKD--DFEREELIQEIFKLKDKHRDVIVKQIKKLGASYDHSRERFTLDDSFCKAVNKV 158

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           +K +  KG IY+G Y         +  +D+E+ YK  DG+ Y
Sbjct: 159 FKNLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|297849874|ref|XP_002892818.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338660|gb|EFH69077.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1108

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 16/157 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  A    L+  G+ D  +  KA F+P  +   G DIL F    W A ++  
Sbjct: 616 DPD-VLDTWFSAGLFPLSVLGWPDVTEDFKA-FYPTSVLETGHDILFF----WVARMVMM 669

Query: 283 NLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L       KV+ H  I    G K+SKSLGNVIDP+EVI  V ++ L   L       
Sbjct: 670 GMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDP 729

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           K+    K+G  K    D  NGI    + ++   L  Y
Sbjct: 730 KEVVVAKEGQVK----DFPNGIPECGADALRFALVSY 762



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 184 HIGHALTAAIEDTIIRWKRMSGYNALWVPGVD-----------HAGIATQVVVEKKLMRE 232

Query: 81  RDMADVLDISYDDFIRTTEK 100
           R M    D+  ++F++   K
Sbjct: 233 RGMTR-HDVGREEFVKEVWK 251


>gi|254454638|ref|ZP_05068075.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198269044|gb|EDY93314.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 976

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D  DGS+     ADL++ G D  R  FH+            
Sbjct: 584 ILDVWFDSGSTHAFT--LRDREDGSEDGL--ADLYLEGTDQHRGWFHSSMLQGCGTIGRA 639

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P +++++ G D LR ++ +
Sbjct: 640 PY-RGVLTHGFTLDEKGMKMSKSIGNTIVPEKIVQQYGADILRLWVAQ 686



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++ER+   +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 54  VEERKAFTLHDGPPYANGHLHIGHALNKILKDMVVRSQQMMGKDARYIPGWDCHGLPI 111


>gi|167771623|ref|ZP_02443676.1| hypothetical protein ANACOL_02995 [Anaerotruncus colihominis DSM
           17241]
 gi|167666263|gb|EDS10393.1| hypothetical protein ANACOL_02995 [Anaerotruncus colihominis DSM
           17241]
          Length = 827

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 48/231 (20%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFIL-HKGEKIS 304
           +W P D +  G +    H +Y   W  FL     +S   P  K+  SHG IL   GEK+S
Sbjct: 549 YWMPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVSTPEPYAKRT-SHGMILGENGEKMS 607

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +++ + G D LR + +      K   + +  +K         G    + R
Sbjct: 608 KSRGNVVNPDDIVRDYGADTLRLYEMFIGDFEKSAPWSQSSIK---------GCKRFLER 658

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              ++    D + P   A++ + ES L    + ++++ E++++   + A+A ++SL+++V
Sbjct: 659 VFGLL----DCLEPGE-AYSSALESAL---HKTIKKVTEDIESLKFNTAIAAMMSLLNDV 710

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               D  K                 +    ++ L ILL  F P +  ++++
Sbjct: 711 ---CDHGK-----------------INAAELKTLLILLNPFAPHMTEEMWE 741



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R +G +VL+  G D  G      A
Sbjct: 56  KPKYYALVEFPYPSGQGLHVGHPRSYTALDIVARKRRFEGYNVLYPMGWDAFGLPTENYA 115

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  +     N + F+     L +S+D    + TT+  ++   + ++ ++  +G  Y
Sbjct: 116 IKNHIHPEKVTHDNVQRFKAQLKSLGLSFDWSREVNTTDPSYYKWTQWIFLQLFKRGLAY 175

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           K   S  +    +    ++EV  G   +  +   + V  QWM       +++ Y  +LL
Sbjct: 176 KKEMSVNWCTGCKVVLANEEVVNGVCERCGSEVVHKVKSQWM------LKITEYAQRLL 228


>gi|258611616|ref|ZP_05234151.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258601879|gb|EEW15204.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 841

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 556 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 615

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 616 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 675

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 676 GTLAEKVTTDANANLEKAYHHMVKT 700



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 185

Query: 119 IYKG 122
            Y+ 
Sbjct: 186 AYEA 189


>gi|16803700|ref|NP_465185.1| leucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224503674|ref|ZP_03671981.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254898173|ref|ZP_05258097.1| leucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|29336552|sp|Q8Y6M4|SYL_LISMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16411096|emb|CAC99738.1| leucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 803

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANANLEKAYHHMVKT 662



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|157828905|ref|YP_001495147.1| valyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933628|ref|YP_001650417.1| valyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166225531|sp|A8GTB4|SYV_RICRS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083632|sp|B0BUV1|SYV_RICRO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157801386|gb|ABV76639.1| valyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908715|gb|ABY73011.1| valyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 812

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 38/282 (13%)

Query: 223 DPQY-IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--W 275
           +P Y +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y   
Sbjct: 450 EPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTIL 509

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       
Sbjct: 510 KAHLHQNTLPWKNIMISGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KL 568

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  Y +D +K          + N +  +   +   +D +        +   S+L +  
Sbjct: 569 GADTAYSEDVMKN------GKRLVNKLWSAAKFVFIHFDKL-----KGEDKKASLLDIKE 617

Query: 396 RVLQEIRENMQNQLIHRA-----------------LAQVISLVSEVDRYFDAQK--PWEL 436
           ++  E  + M N+L+                    L +    V   D Y +  K   ++ 
Sbjct: 618 KITNEFDKWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVFCDNYLEISKTRSYDE 677

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 678 EHKNPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 35 KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 87


>gi|329847393|ref|ZP_08262421.1| leucyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328842456|gb|EGF92025.1| leucyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 856

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + D++ARF R  G DVL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHMGHVRNYAMGDLVARFKRARGFDVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N  N R     L +S D
Sbjct: 91  ERNVHPKGWTYDNIANMRSELKRLGLSID 119


>gi|300780637|ref|ZP_07090492.1| valine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533623|gb|EFK54683.1| valine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 917

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 70/178 (39%), Gaps = 24/178 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP---------------KKVFSHGFIL- 297
           KF+P  + V   DIL F       F   A    P               + +F HG +  
Sbjct: 495 KFYPTTVLVTAYDILFFWVARMMMFGTFAGTQTPDVLGSGADGRPQIPFEHIFLHGLVRD 554

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG K+SKSLGN IDP++ + + G DALR+ L R    G D     D      NA  A  
Sbjct: 555 EKGRKMSKSLGNGIDPMDWVRDYGADALRFALARGANPGIDLPIGDD------NAASARN 608

Query: 358 IGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               +  +    L +   + P P     T++D  IL     V   + E + +    +A
Sbjct: 609 FATKLYNATKFALMNGAALGPLPPREQLTDADRWILDRLETVRSHVDELLDDYQFSKA 666


>gi|257060679|ref|YP_003138567.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590845|gb|ACV01732.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 856

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + G+    +  +N    +     L +S D
Sbjct: 92  DRGIPPAEWTYKNMSQMKQQLQTLGLSID 120



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 25/176 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG- 359
           EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D        +AD+      
Sbjct: 616 EKMSKSKYNGVDPKQVLGKYGADTARMFILFKAPPEKDLEWD--------DADVEGQFRF 667

Query: 360 -NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N V R V+  L++    +      T+ ++ +       ++EI E+++         Q  
Sbjct: 668 LNRVWRLVANYLENKPKTVKKASELTKEEKDLRRAIHTAIKEISEDLEGDY------QFN 721

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + VSE+ +  +A           D       V  E I  L ILL  F P +A +++
Sbjct: 722 TAVSELMKLSNALT---------DAKCLESGVYQEGIETLLILLAPFAPHIAEELW 768


>gi|168704261|ref|ZP_02736538.1| putative leucyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 921

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH       D+LARF R++   VL   G D +G    + A
Sbjct: 36  KPKYYILDMFPYPSGAGLHVGHPEGYTATDILARFKRMNNFHVLHPMGWDAYGLPAEQYA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               V  ++   QN   FR     L  SYD
Sbjct: 96  VEKNVHPRITTQQNINTFRRQIKALGFSYD 125



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +  K+SKS GNV++P ++++E G D+LR +         + F       K  N     G+
Sbjct: 686 RAHKMSKSRGNVVNPDDIVKEYGADSLRLY---------EMFMGPLEAVKPWNTKSVEGV 736

Query: 359 GNLVSRSVSMILKDY-DGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              +SR+  +I+ D  + +   P     E D   L V  R +Q++ E+ +    + A++ 
Sbjct: 737 YRFLSRAWRLIVDDMAESLTLNPAVKDVEPDRDTLRVLHRTIQKVGEDTEGLRFNTAISA 796

Query: 417 VISLVSEVDR 426
           ++  V+   +
Sbjct: 797 MMEFVNHATK 806


>gi|13357972|ref|NP_078246.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762094|ref|YP_001752494.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920368|ref|ZP_02931698.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508502|ref|ZP_02958030.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701674|ref|ZP_02971372.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549554|sp|Q9PQ79|SYI_UREPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|11271209|pir||G82894 isoleucyl-tRNA synthetase UU410 [imported] - Ureaplasma urealyticum
 gi|6899398|gb|AAF30821.1|AE002138_8 isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827671|gb|ACA32933.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902796|gb|EDT49085.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675931|gb|EDT87836.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700922|gb|EDU19204.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 900

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 22/191 (11%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           K LS+  KTF    K  D    IM VW D+ ++Y     Y  N        +PAD+++ G
Sbjct: 509 KYLSMKNKTF---YKEKD----IMDVWFDSGSSYNILGHYNLN--------YPADVYLEG 553

Query: 265 KDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVG 321
            D  R  F++      +L+   P  K + +HG +L  +G K+SKS GNV+DP++V +  G
Sbjct: 554 YDQYRGWFNSSLITGTILNNRAPY-KYLVAHGMVLDGEGYKMSKSKGNVVDPLDVCKIYG 612

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR ++        D    ++ LK+  NA++   I N + +    IL D++  +    
Sbjct: 613 ADVLRLWIANS-DYQNDTRISEEILKQ--NAEIYRRIRNTLFKYSLSILNDFEPSVDFSF 669

Query: 382 AFTESDESILS 392
              + ++ +L+
Sbjct: 670 NVRQEEQFVLN 680


>gi|326577616|gb|EGE27493.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 1095

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 26/181 (14%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+     N I  L++ +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR----NTIRFLLANT 840

Query: 366 VSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                 D+D    MI T       D+ IL     + QEI +   +   H+    V+   S
Sbjct: 841 -----DDFDPKTDMIST-DKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGFCS 894

Query: 423 E 423
           +
Sbjct: 895 Q 895



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|313681647|ref|YP_004059385.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154507|gb|ADR33185.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 815

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+ + H+GH     I D  AR++R  G +VL   G D  G     AA 
Sbjct: 30  KPKKYVLSMFPYPSGRIHMGHVRNYTIGDAFARYYRQQGFNVLHPIGWDSFGMPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             GV  K +  +N    R     L +S+ +
Sbjct: 90  KHGVHPKKWTYENIATMRGELAGLGLSFSE 119



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GN +DP E++ + G D  R F++
Sbjct: 571 LLTQGMVLKDGAKMSKSKGNTVDPGELVAKYGADTARLFIL 611


>gi|167042222|gb|ABZ06954.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_ANIW93I24]
          Length = 951

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/228 (19%), Positives = 104/228 (45%), Gaps = 27/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS--ANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           F+P D    G+D++  H  +   F+L+  A  P    P+++  +G +L  G+K+SKS+GN
Sbjct: 570 FYPVDSRHSGRDLVPNHLTF---FVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGN 626

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +I   + + + G D +R  ++      +D  ++ + +K      + N + ++        
Sbjct: 627 IIPLRDAVRKYGADPIRLTILISAELLQDADFNVEAIK-----GIKNKLASMYEDCTKTK 681

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            + +  + P         ++++   S+ + EIR     + +H  L             FD
Sbjct: 682 AEKFPELEPEDKWIHGILQNLVLNASQSIDEIR---LREALHHILFD-----------FD 727

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++  W LK+T   + + +  +  +++    ++L  F P +A ++++ L
Sbjct: 728 SELQWYLKRTKSKQRTNISGILHKILSYRVLMLSPFAPHIAEEMWEKL 775



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          ++EK +I+ A  YPN+  HIGH     I DV +R+ R+ G +VLF  G    G  I
Sbjct: 28 DKEKKFITVAYPYPNSPQHIGHGRTYTITDVYSRYLRMKGFNVLFPMGFHYTGTPI 83


>gi|148927744|ref|ZP_01811180.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886907|gb|EDK72441.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 811

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 15/180 (8%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH     I D LAR  R+ G +VL   G D  G      A
Sbjct: 31  KPKRYILEYFPYPSGAAMHVGHVRNYTIGDTLARHMRMSGYNVLHPMGWDAFGLPAENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G++ +  + +N+  F+     +   YD   +F  +++  ++   + L+  +  +G  
Sbjct: 91  IKTGISPQQAIKENTGKFKQQLMQMGFGYDWSREFA-SSDPEYYRWTQWLFLLLYKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y+     W+   D+    +++V  G     G     +  P QW      FF+++ Y D+L
Sbjct: 150 YRKESPQWWCPVDKTVLANEQVENGRCWRCGTEVEKKALP-QW------FFKITDYADRL 202



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%)

Query: 250 GSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK- 299
             K K W P D ++ G +    H +Y   W   +    L     P  K + +HG IL   
Sbjct: 514 AEKVKHWLPVDDYIGGAEHAVMHLLYARMWTKVMFDEGLIDFHEPF-KTLRNHGMILAPD 572

Query: 300 GEKISKSLGNVIDPIEVIEE-VGVDALR 326
           G K+SKS GNVI P ++I++  G DA+R
Sbjct: 573 GRKMSKSWGNVIAPDDLIKQGYGADAIR 600


>gi|198275943|ref|ZP_03208474.1| hypothetical protein BACPLE_02126 [Bacteroides plebeius DSM 17135]
 gi|198271572|gb|EDY95842.1| hypothetical protein BACPLE_02126 [Bacteroides plebeius DSM 17135]
          Length = 1162

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGAIEKFGSDPLRWYMITNSSPWDNLKFDTDGV 754


>gi|237739145|ref|ZP_04569626.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423745|gb|EEO38792.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 933

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G      P 
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLHR---PC 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G+K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGKKMSKSLGNTVAPSD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFKSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  AKA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVAKAREMSPLEIRKRCEEYARKW------VGIQKEQFIRLGVLGDWDHPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I +KG I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEI 203


>gi|299143964|ref|ZP_07037044.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518449|gb|EFI42188.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 803

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 52/235 (22%)

Query: 254 KFWPA-DLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFIL-HKGEKI 303
           K+W A D +  G +    H +Y   W  FL    + +P     KK  SHG IL + GEK+
Sbjct: 524 KYWTAVDWYNGGMEHTTLHLLYSRFWHKFLYDIGV-VPTKEPYKKRTSHGMILGNNGEKM 582

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVI+P ++I + G D LR + +      K+  +  +G+K         G    + 
Sbjct: 583 SKSRGNVINPDDIIRDYGADTLRTYEMFIGDFEKNAPWSDNGVK---------GCRRFLE 633

Query: 364 R--SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           R  ++  IL + +          +  +S+ S   + ++++  + +N   + A+A ++SL+
Sbjct: 634 RVWNLQSILNNGE----------DYSKSLESSIHKAIKKVSHDYENLKANTAIAALMSLL 683

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +E    F+  K                 +T + ++   ILL    P +  ++++I
Sbjct: 684 NE----FNENKS----------------ITKKDLKTYLILLNPVAPHITEELWEI 718



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+ Q  H+GH       D++AR  R +G +VL+  G D  G      
Sbjct: 30  DKEKFYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRYEGYNVLYPMGWDAFGLPTENF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +       QN   F+     +  S+D    + TT+ +++   + ++ ++  +G  
Sbjct: 90  AIKNKIHPAKVTKQNVNRFKKQLKSIGFSFDWSREVNTTDPKYYKWTQWIFLQLFKRGLA 149

Query: 120 YK 121
           YK
Sbjct: 150 YK 151


>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 921

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 921

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVNRQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|51599084|ref|YP_073272.1| isoleucyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81825610|sp|Q65ZU1|SYI_BORGA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51573655|gb|AAU07680.1| isoleucyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 1042

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTSLFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EVI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMEVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPG-AFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            D   PT   +  +S   D+ I+S    + + + + +    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPTKNLSLVKSNNLDKWIISELESLKKILNKEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|284166921|ref|YP_003405200.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016576|gb|ADB62527.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 882

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 41/250 (16%)

Query: 241 TTGYLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--LLSANLPLPKK-----VF 291
           + G  D P D  +A  W P D +V G +    H +Y   F  +L+ +  L  +     + 
Sbjct: 501 SPGLEDAPFDLERANDWMPVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFTNLL 560

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           + G +  +GEK+SKS GNV+ P  ++EE G D  R F+++     +D  + ++G++   N
Sbjct: 561 AQGMVQLEGEKMSKSKGNVVSPQRIVEEYGADTARLFMMQAAQPERDFDWSEEGVRS-TN 619

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEI---RENMQN 407
           A LA   G         +++DY    P        D+++ S V S +   I    +   +
Sbjct: 620 AFLARLKG---------MVEDYVSDEPAG-----DDDAVASYVDSEIDATIALATDEYDD 665

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              ++AL +   LV  + +Y D  +P          A T       V+R    LL    P
Sbjct: 666 LTFNKALRETQDLVRTLRQYADYTEP---------HAETYERGLSAVVR----LLAPVAP 712

Query: 468 KLANKIFDIL 477
            LA +++D L
Sbjct: 713 HLAEELWDEL 722



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 28/185 (15%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  ARF R+ G +VL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARFRRMQGDEVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-------------RILWKKIS 114
             + +         +  + +   YD       +R   TC             R L + + 
Sbjct: 96  NPRDWTFDCIETMTEQMESMGFGYD------WEREITTCTPEYYQWNQWLFSRFLEEDLV 149

Query: 115 DKGDI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           ++ D     C      L DE    + E+    D         PV+  E E +F +++ Y 
Sbjct: 150 ERRDAEVNWCPHCETVLADEQVEGEAELCWRCD--------TPVEQRELEQWFLKITEYA 201

Query: 174 DKLLS 178
           D+LL 
Sbjct: 202 DELLE 206


>gi|237751326|ref|ZP_04581806.1| valyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372692|gb|EEO23083.1| valyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 926

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 55/226 (24%)

Query: 204 LKDLSLSRKTFDWGIKIP--------------DDP-------------QYIMYVWIDALT 236
           L+D  +SR+ + WG +IP              D+P               ++  W  +  
Sbjct: 424 LRDWCISRQLW-WGHRIPVFYCECGNEFASKDDNPICPKCGGKNITQDNDVLDTWFSSGL 482

Query: 237 NYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA-FLLSANLPL 286
              +T G+  N D  K + W         P  L + G DIL F    W A  LLSA++  
Sbjct: 483 WTHSTLGF-GNGDFGKGELWQESDLKDFHPNSLLITGFDILFF----WVARMLLSADINC 537

Query: 287 P----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                K ++ H  +L  KG+K+SKS GNVIDP+ +      D +R+ L      G+D   
Sbjct: 538 KEIAFKDIYLHALVLDEKGQKMSKSKGNVIDPLNLCATFSPDVVRFSLAFLCVQGRDIRL 597

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            +  L+  +  +  N I N +S      L+ Y G + +   F E +
Sbjct: 598 SQKQLE--ITRNFTNKIINAMS-----FLELYAGQLRSEYRFNEKE 636



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 62 HIGHALTFTLQDIITRYKRMDGFRVLWQPGLDHAG 96


>gi|226939053|ref|YP_002794124.1| leucyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782503|sp|C1DA02|SYL_LARHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226713977|gb|ACO73115.1| Syl [Laribacter hongkongensis HLHK9]
          Length = 866

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  +   YP+ + H+GH     I DVL+R+  L G +VL   G D  G     AA 
Sbjct: 32  RPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYMALKGYNVLQPMGWDAFGMPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +   N    +     L   I ++  + T +  ++   + L+ ++ +KG IY 
Sbjct: 92  KNQVAPAAWTYSNIEYMKTQLKSLGFAIDWEREVTTCKPDYYRWEQWLFTRLFEKGVIYR 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K     W  +      N+  +    DG+ + +    V+  E   Y+F ++ Y D+LL+
Sbjct: 152 KNGVVNWDPVDQTVLANEQVI----DGRGWRSGAL-VEKREIPMYYFGITQYADELLA 204



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 51/247 (20%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHV----IGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           +  T Y D  +GSK    PAD+ +     GK I   H         +  LP+        
Sbjct: 580 VCETFYRDLDNGSKEWITPADVVIERDGKGKIIAATHK--------ADGLPV-------- 623

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            ++   EK+SKS  N +DP  +IE+ G D  R F++      +   +   G++       
Sbjct: 624 -VVGGIEKMSKSKNNGVDPQALIEQYGADTARLFMMFAAPPSQSLEWSDAGVE------- 675

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
             G    + R   ++ +   G +      G  T  ++++       +Q++ ++    Q  
Sbjct: 676 --GAYRFLKRLYKIVSEYVAGGVAERFVAGELTADEKALRLKLHTTIQKVSDDFGVRQQF 733

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+A V+ L++  DR            T   RA     V  EV+  + +LL   VP + 
Sbjct: 734 NTAIAAVMELLNLFDR------------TEASRA-----VRQEVLESVVVLLSPIVPHIC 776

Query: 471 NKIFDIL 477
             ++  L
Sbjct: 777 ETLWSAL 783


>gi|224541716|ref|ZP_03682255.1| hypothetical protein CATMIT_00888 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525320|gb|EEF94425.1| hypothetical protein CATMIT_00888 [Catenibacterium mitsuokai DSM
           15897]
          Length = 911

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++   TG L      +   +PADL+  G D  R  F++       +    
Sbjct: 517 IMDVWFDSGSSH---TGVL----VERGLGYPADLYFEGSDQYRGWFNSSLIIGTAVHGKA 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  K V SHGF L  KG K+SKS GN +DPI+ I + G D LR +
Sbjct: 570 PY-KTVLSHGFTLDGKGLKMSKSGGNAVDPIKTINKWGADILRLW 613



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 29/67 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E         Y N   H+GH    +I DV+ R+  ++G    +  G D HG  I  A Q
Sbjct: 39  KEHFIFHDGPPYANGNMHVGHMLNKVIKDVICRYKNMEGFYTPYIPGWDTHGLPIENAIQ 98

Query: 64  NAGVTTK 70
             GV  K
Sbjct: 99  KQGVDRK 105


>gi|218885370|ref|YP_002434691.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|254782391|sp|B8DPD6|SYI_DESVM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218756324|gb|ACL07223.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 938

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++   +  L+   G  A  +PADL++ G D  R  FH+    A + +  +
Sbjct: 535 ILDVWFDSGTSF---SAVLEQ-RGDTA--FPADLYLEGSDQHRGWFHSSLL-ASMGTRGV 587

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HG+++  +G K+SKS+GNVI P E+I++ G + LR ++ 
Sbjct: 588 PPYRAVLTHGYVVDGEGRKMSKSIGNVIAPQEIIDKYGAEILRLWVA 634


>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|81485032|sp|Q8RH47|SYI_FUSNN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 933

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G      P 
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLHR---PC 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G+K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGKKMSKSLGNTVSPED 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640


>gi|71022049|ref|XP_761255.1| hypothetical protein UM05108.1 [Ustilago maydis 521]
 gi|46097749|gb|EAK82982.1| hypothetical protein UM05108.1 [Ustilago maydis 521]
          Length = 1111

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P DL   GKD++  H  +   ++ SA  P    P+ + ++G ++  G+K+SKS GN +
Sbjct: 696 FYPMDLRSSGKDLIPNHLTFC-VYVHSALFPEHHWPRAIRANGHLMLNGKKMSKSTGNSL 754

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
              + +E+ G DA R  L    A   DG  D +  +K  NA++
Sbjct: 755 SLRQSVEKFGADATRLSL----ADAGDGIEDANFEEKTANANI 793


>gi|293364008|ref|ZP_06610744.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552498|gb|EFF41272.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 781

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 14/159 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ Q H+GH    +I D +ARF+R  G +VL   G D  G     AA   
Sbjct: 34  KKYILSMFPYPSGQVHMGHVRNYVIGDAIARFYRRRGYNVLHPFGWDAFGLPAENAAIKN 93

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG- 122
               K +  +N +   ++   L IS+  D    T +  +    + L+ K+  KG +Y+  
Sbjct: 94  NFHPKDWTYKNIQTMNEVIKQLGISFAWDLECITADDDYAKWEQHLFLKLWHKGLVYRKK 153

Query: 123 -----CYSGWYSLRDEAYYN------DDEVYKGADGQYY 150
                C +    L +E   N      D +V K    QYY
Sbjct: 154 TELNFCETDQTVLANEQVINETCWRCDSKVVKKEMDQYY 192



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 36/189 (19%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------VREIACGKDGFYDK 343
           + + G +L  G K+SKS GNV+ P ++I+  G D  R F+      V+E+     G    
Sbjct: 530 LLTQGMVLKDGAKMSKSKGNVVIPTDMIDAYGADVTRLFILFAAPPVKELEWSDSGILGC 589

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ--EI 401
               KR+           +S+ VS    DY   I T     E  ++   +   + +  EI
Sbjct: 590 FKFVKRLWT---------LSQKVSK--NDYIKNIDTSSLTLEQKDARRKLYQGLNKSLEI 638

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            EN +N+    +   +IS   E    +DA +       N +  +  LYVT+ +       
Sbjct: 639 FENRKNEY---SFNTIISWCMETINAYDAIE-------NKNLLAEYLYVTLNI------- 681

Query: 462 LQAFVPKLA 470
           L+ ++P L+
Sbjct: 682 LEPYMPHLS 690


>gi|256960187|ref|ZP_05564358.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293382552|ref|ZP_06628486.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387847|ref|ZP_06632386.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|312901038|ref|ZP_07760329.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
 gi|312906845|ref|ZP_07765842.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|312978900|ref|ZP_07790626.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|256950683|gb|EEU67315.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291080100|gb|EFE17464.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082694|gb|EFE19657.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627099|gb|EFQ10382.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|311288337|gb|EFQ66893.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|311291864|gb|EFQ70420.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
          Length = 933

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|229548944|ref|ZP_04437669.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229305965|gb|EEN71961.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 933

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|298492550|ref|YP_003722727.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234468|gb|ADI65604.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 859

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 36  QPKFYALSMFPYPSGRLHMGHVRNYTITDVIARLKRMQGYLVLHPMGWDGFGLPAENAAI 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + GV    +  QN    R     L +S D
Sbjct: 96  DRGVPPAKWTYQNIEQMRQQLQRLGLSLD 124


>gi|218247996|ref|YP_002373367.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226695252|sp|B7JYA9|SYL_CYAP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218168474|gb|ACK67211.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 856

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + G+    +  +N    +     L +S D
Sbjct: 92  DRGIPPAEWTYKNMSQMKQQLQTLGLSID 120



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 25/176 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG- 359
           EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D        +AD+      
Sbjct: 616 EKMSKSKYNGVDPKQVLGKYGADTARMFILFKAPPEKDLEWD--------DADVEGQFRF 667

Query: 360 -NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N V R V+  L++    +      T+ D+ +       ++EI E+++         Q  
Sbjct: 668 LNRVWRLVANYLENKPKTVKKASELTKEDKDLRRAIHTAIKEISEDLEGDY------QFN 721

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + VSE+ +  +A           D       V  E I  L ILL  F P +A +++
Sbjct: 722 TAVSELMKLSNALT---------DAKCLESGVYQEGIETLLILLAPFAPHIAEELW 768


>gi|206561062|ref|YP_002231827.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|254782376|sp|B4E8Z7|SYI_BURCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|198037104|emb|CAR53025.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 945

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++   ++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDFAQHAVPV-DEWLEIDRYAVAFSQQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY +T 
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTH 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A K+F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWKVF 798



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|57157209|dbj|BAD83634.1| valyl tRNA synthetase [Entamoeba histolytica]
          Length = 527

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 20/164 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           I++  DP  ++  W  +     +  G+   P+ +K   K++P +L   G DI+ F    W
Sbjct: 46  IELKQDPD-VLDTWFSSGLFPFSVMGW---PEQTKDLEKYFPGELLETGNDIIFF----W 97

Query: 276 PAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++  +L L      K+V  H  +   +G K+SKSLGN+IDPI+VIE + +  L   L
Sbjct: 98  VARMVMMSLELMDCLPFKEVLFHSIVRDAQGRKMSKSLGNIIDPIDVIEGISLKGLNDKL 157

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  K+     +G KK    D  NGI    + ++   L  Y
Sbjct: 158 YTYNLPEKECVIAAEGQKK----DFPNGIEECGTDAMRFALLAY 197


>gi|85709711|ref|ZP_01040776.1| isoleucyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688421|gb|EAQ28425.1| isoleucyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 949

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 11/114 (9%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW D+   +         PD      WPA+L++ G D  R  F +   
Sbjct: 559 PDDYEMVTDILDVWFDSGCTHAFVLESGRWPDLQ----WPANLYLEGSDQHRGWFQSSLL 614

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +       P   +V +HGF +  KG K SKSLGN  DP++++E+ G D +R +
Sbjct: 615 QSCATRGRAPY-DQVLTHGFTMDAKGRKQSKSLGNTTDPVKMMEQTGADIIRLW 667



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           + REK  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 50  RGREKFILHDGPPYANGDMHIGHALNHILKDMVCRTQNLMGKDAPYVPGWDCHGLPI 106


>gi|262341212|ref|YP_003284067.1| valine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272549|gb|ACY40457.1| valine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 883

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 14/113 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLG 308
           ++P +  V G DIL F    W A ++ A L   KK     VF  G I   K +KISKSL 
Sbjct: 485 YYPTEDIVTGSDILFF----WVARMIIAGLFFQKKKPFKRVFFTGIIRDSKNQKISKSLN 540

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD-KDGLKKRVNADLANGIGN 360
           N  DP++++ + G DA+R  L+ + + G+D  +D K  L+ R   + +N I N
Sbjct: 541 NSPDPMDLMNQYGADAVRMGLMLKTSAGQDFHFDEKICLQGR---NFSNKIWN 590


>gi|158312685|ref|YP_001505193.1| leucyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158108090|gb|ABW10287.1| leucyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 1016

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 3/119 (2%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ R+  Y+     YP+    H+GH    I +DV ARF R+ G  VL T G D  G    
Sbjct: 65  VRGRDPFYVLDMFPYPSGTGLHVGHPLGYIGSDVFARFLRMTGRHVLHTFGYDAFGLPAE 124

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDK 116
           + A N G   +V  + N  N R     L + +D    I TT+  ++   + ++ KI D 
Sbjct: 125 QYAINTGQHPRVTTEANIANMRRQLSRLGLGHDTRREIATTDTAYYRWTQWIFLKIFDS 183


>gi|315031711|gb|EFT43643.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|307290035|ref|ZP_07569959.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
 gi|306498877|gb|EFM68371.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|257415622|ref|ZP_05592616.1| isoleucyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157450|gb|EEU87410.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|229546850|ref|ZP_04435575.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|257086362|ref|ZP_05580723.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089412|ref|ZP_05583773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307272017|ref|ZP_07553283.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|307289395|ref|ZP_07569349.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|312904565|ref|ZP_07763723.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|229308015|gb|EEN74002.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256994392|gb|EEU81694.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998224|gb|EEU84744.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306499650|gb|EFM69013.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|306511312|gb|EFM80316.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|310632078|gb|EFQ15361.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|315026979|gb|EFT38911.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
 gi|315144388|gb|EFT88404.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
 gi|315162932|gb|EFU06949.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
 gi|315165132|gb|EFU09149.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
 gi|315577381|gb|EFU89572.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|313127462|ref|YP_004037732.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293827|gb|ADQ68287.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 962

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+ +   G  L +GEK+S S G+V+ P + IEE G D +R+FL+       + + D D  
Sbjct: 614 PEGIVIMGMGLLEGEKMSSSKGHVVLPGKAIEEYGADTVRFFLLN----SAEPWQDYDWR 669

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            ++V + + N +    +R+  +I  D     P      + D  +LS     + ++ E M+
Sbjct: 670 AEQVES-VRNQLERFWNRADEVINSDVPEAQPE---LEQEDRWLLSKLQHTVSDVTEAME 725

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            Q   R+ +Q           F+    W  ++T+ DR +   +    V+     LL  F+
Sbjct: 726 -QSETRSASQAAFY------NFEEDLRWYRRRTDLDRPA-ARWTLQHVLETRLRLLAPFI 777

Query: 467 PKLANKIFDIL 477
           P + N++ + L
Sbjct: 778 PFMTNELHERL 788



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          +I+    YP+   HIGHA    + DV AR+ R  G +VLF       G  I  A +
Sbjct: 42 FITVPYPYPSGGMHIGHARTYTVPDVYARYRRQQGDNVLFPIAWHVTGTPIIGAVE 97


>gi|227555113|ref|ZP_03985160.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257418593|ref|ZP_05595587.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|307268083|ref|ZP_07549471.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|307275486|ref|ZP_07556628.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|312952725|ref|ZP_07771587.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|227175781|gb|EEI56753.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257160421|gb|EEU90381.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|306507874|gb|EFM77002.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|306515724|gb|EFM84251.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|310629241|gb|EFQ12524.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|315034232|gb|EFT46164.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
 gi|315153079|gb|EFT97095.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
 gi|315156852|gb|EFU00869.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
 gi|315157638|gb|EFU01655.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
 gi|315168031|gb|EFU12048.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
 gi|315574253|gb|EFU86444.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|315581592|gb|EFU93783.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
 gi|327534589|gb|AEA93423.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|222153411|ref|YP_002562588.1| isoleucyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114224|emb|CAR42801.1| isoleucyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 931

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++     +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMN---AREQLSYPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKS GN+I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWVT 623



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     G+       
Sbjct: 58  YANGNIHVGHALNKISKDIIVRAKSMSGYNAPYVPGWDTHGLPIEQVLAKKGI------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+A+ L++  D  +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLAEYLEMCRDYALSQVDKQRQDFKRLGVSADWDNPYVTLDPAYEADQVRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++DKG IY+G    ++S   E+   + E+
Sbjct: 169 AMADKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|88855054|ref|ZP_01129719.1| leucyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815582|gb|EAR25439.1| leucyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 868

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 17/183 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + YI     YP+   H+GHA      D+ AR+ R  G +VL   G D  G     AA
Sbjct: 47  KRPRKYILDMFPYPSGDLHMGHAEAYAFGDIAARYWRQRGFNVLHPIGWDSFGLPAENAA 106

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              G+  + +    +DQ  ++ +      D  +D  + T++  ++   + L+ K+ +KG 
Sbjct: 107 IERGIDPRGWTYDNIDQQKKSMKLYGVSFD--WDRVLHTSDPEYYKWNQWLFLKMYEKGL 164

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQD 174
            Y K  +  W  + D+    +++V      +   A   +    QW      + +++ Y D
Sbjct: 165 AYRKDSWVNWDPV-DQTVLANEQVLADGTSERSGAVVVKKKLTQW------YLKITDYAD 217

Query: 175 KLL 177
           +LL
Sbjct: 218 RLL 220


>gi|315149525|gb|EFT93541.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|307354496|ref|YP_003895547.1| valyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157729|gb|ADN37109.1| valyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 865

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 22/265 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W+D+  + L  TG+    DGS   K +PA +   G DI+R  A Y    +  L+ +
Sbjct: 449 VLDTWMDSSISVLNITGW----DGSGTPKLFPAQIRPQGHDIIRTWAFYTILRSVALTGS 504

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  + +  +G +L   G K+SKS  N+I P E++ + G D  R +     + G+D  ++
Sbjct: 505 HPW-ENILVNGMVLGDDGFKMSKSRNNIIAPEEILVKYGADPFRQWSAAGASTGQDIVFN 563

Query: 343 KDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            + +    R    + N     ++R V M L+   G      A    D  ++   S  ++E
Sbjct: 564 WNDVIAASRFQTKMWN-----INRFVLMHLE--RGYPEDNEATYLVDRWMMHRLSESIEE 616

Query: 401 IRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   M+     +A+  +     +V  D Y +  K   L  +   R S  LYV    +  L
Sbjct: 617 VTAAMEGFQFDQAIRAIREFARDVFADNYIELVKG-RLYGSEEGRGS-ALYVLRTCLDAL 674

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             +L    P  A + +  L    E+
Sbjct: 675 CRMLAPMTPFFAEECYSYLTGGKES 699



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKA 61
           ++ +  I T   YP    HIG+A+     D +AR+ R+ G +V+F  G D HG     K 
Sbjct: 36  KKPQFIIDTPPPYPTGNFHIGNAFNWCYIDFIARYKRMRGYNVMFPQGWDCHGLPTEVKV 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +  G+T     D   + FR+M   L +   + +R T  R
Sbjct: 96  EELNGITKN---DVPRQQFREMCRELTLKNIEKMRQTMIR 132


>gi|288561333|ref|YP_003424819.1| leucyl-tRNA synthetase LeuS [Methanobrevibacter ruminantium M1]
 gi|288544043|gb|ADC47927.1| leucyl-tRNA synthetase LeuS [Methanobrevibacter ruminantium M1]
          Length = 957

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF 47
          E+EKL+++ A  YP+   HIGH     + DV ARF R++G +VLF
Sbjct: 26 EKEKLFLTVAYPYPSGAMHIGHGRTYTVPDVFARFKRMEGYNVLF 70


>gi|49658911|emb|CAF28538.1| putative tRNA synthetase [Yersinia pseudotuberculosis]
          Length = 486

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/353 (19%), Positives = 145/353 (41%), Gaps = 33/353 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   H+GH +   + ADV+ R  +  G DVLF T +D++   + +  + 
Sbjct: 3   KFIVTATPPTPNGDLHLGHLSGPFLAADVMQRRLKQLGHDVLFVTYSDDYQSYLPRKTKA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR-HHDTCRILWKKISDKGDI--YK 121
                  +     +  +   ++++I +D F++  +   +  +     K I+ + ++  +K
Sbjct: 63  LHRQPFAYARLMRQAMQLSLELVNIRFDTFMQAADTPVYQHSGEHYAKLIAGQTELKEHK 122

Query: 122 GCYSGWYSLRD-EAYYNDDEVYKGADGQYYNAQH----------NPVQWMEEEGYFFRLS 170
             Y    +L   E +      + G        +H            +  M  +G    + 
Sbjct: 123 TFYCATCNLYGYEGFGRTQCNWCGTSSDTSQCEHCARVPDIEKITAMTCMSCQGAMQPVQ 182

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP------ 224
             Q  + +  +++P     +++R   +    +G  D  LS ++  W +  P D       
Sbjct: 183 VKQ-HIWTIGQNYPAVKAALQQRP--MRPCLTGYLDDVLSNESEQWSLTRPGDAGLPVAA 239

Query: 225 --QYIMYVWIDALTNYLTTT-GYL-DNPD-GSKAKFWPAD---LHVIGKDILRFHAIYWP 276
              Y ++ W   L+ Y +    YL  +P+ G  A++W  D   +H++G D    HA+ + 
Sbjct: 240 LDNYPLHTWFLGLSGYRSCVESYLATHPERGEFAEWWAPDTELVHLLGFDCSYSHAVGYS 299

Query: 277 AFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           + LL+    P P    ++ F+   GE  S S G+ +   ++  +   DA+R F
Sbjct: 300 SLLLADQTGPCPGTFITNRFLKLDGEDFSTSRGHAVWIKDLTGQYPSDAIRLF 352


>gi|71894327|ref|YP_278435.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851115|gb|AAZ43724.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 765

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 6/175 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+ +   YP+ Q H+GH     I D +AR++R +  +VL   G D  G     AA   
Sbjct: 31  KKYVLSMFPYPSGQLHMGHVRNYTIGDAIARYYRKNNFNVLHPFGWDAFGLPAENAAIKN 90

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  +N      +   L IS+  +  + T +  +    + ++ K  +   IY+  
Sbjct: 91  NIHPKKWTYENIETMNKVIKELGISFSWNRELATCDNDYTKWEQYIFLKFLENNLIYRKK 150

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
               +  +D     +++V    D + +    N +Q  E E Y+ +++ Y ++LL+
Sbjct: 151 SLLNFCEQDNTVLANEQV---IDNKCWRCD-NEIQKKELETYYLKITKYANELLA 201



 Score = 44.3 bits (103), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 46/238 (19%)

Query: 249 DGSKAKFWPA-DLHVIGKDILRFHAIYWPAF---LLSANLPLPKKVFS----HGFILHKG 300
           D ++ K+W + D ++ G +    H +Y   F   L+   L   K+ FS     G +L  G
Sbjct: 472 DQAQLKYWNSVDEYIGGIEHAILHLLYARFFTKALVDLKLIDFKEPFSSLLTQGMVLKDG 531

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+ P ++IE+ G DA R F++      K+  +   GL          G   
Sbjct: 532 FKMSKSKGNVVAPTDMIEKYGADATRLFILFATTPSKELEWSDLGLI---------GCFK 582

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R     L D    I   G F                E+ EN+  +         +SL
Sbjct: 583 FLTR-----LTDKVKFINKSGKF----------------EVHENLTKEQKLARYKLYLSL 621

Query: 421 --------VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
                   V E +  F+    W ++  N         +  E+   L  +L+ F+P LA
Sbjct: 622 VKNKEIFEVKENEYAFNTLISWSMETLNEYSNEEDSNLITEMFYVLTYVLEPFIPHLA 679


>gi|78067313|ref|YP_370082.1| isoleucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728930|sp|Q39DM8|SYI_BURS3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77968058|gb|ABB09438.1| Isoleucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 945

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|17230775|ref|NP_487323.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|48428560|sp|Q8YS09|SYL_ANASP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17132378|dbj|BAB74982.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 872

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + GV    +  QN    R     L +S D
Sbjct: 92  DRGVPPAKWTYQNITQMRQQLQRLGLSID 120



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +VI + GVD  R F++ +    KD  +D+  ++ +      N +  LV
Sbjct: 635 MSKSKGNGVAPEDVIAKYGVDTARMFILFKAPPEKDLEWDEADVEGQFR--FLNRVWRLV 692

Query: 363 SRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  V+       G+ P    G  ++S++ +       +Q + E++++        Q  + 
Sbjct: 693 TDYVA------SGVNPKNKSGELSKSEKDLRRAIHTAIQSVTEDLEDDY------QFNTA 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +SE+ +  +A        T+ +   + +Y   E I+ L +LL  F P +A +++ +L
Sbjct: 741 ISELMKLSNAL-------TDANGKDSRVY--AEGIKTLVVLLAPFAPHIAEELWRLL 788


>gi|47093772|ref|ZP_00231521.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258611712|ref|ZP_05241635.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293596862|ref|ZP_05264962.2| leucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|47017859|gb|EAL08643.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605593|gb|EEW18201.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583156|gb|EFF95188.1| leucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
          Length = 841

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 556 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 615

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 616 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 675

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 676 GTLAEKVTTDANANLEKAYHHMVKT 700



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 185

Query: 119 IYKG 122
            Y+ 
Sbjct: 186 AYEA 189


>gi|295086956|emb|CBK68479.1| valyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 878

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   + K++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|293596213|ref|ZP_05229277.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|293593511|gb|EFG01272.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 841

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 556 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 615

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 616 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 675

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 676 GTLAEKVTTDANANLEKAYHHMVKT 700



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 185

Query: 119 IYKG 122
            Y+ 
Sbjct: 186 AYEA 189


>gi|269926124|ref|YP_003322747.1| leucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789784|gb|ACZ41925.1| leucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 816

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 41/232 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           K+ P D ++ GK+ +  H +Y        +    L  + P   ++  HG I H G K+SK
Sbjct: 534 KWLPVDSYMGGKEHIVLHHLYSRFVTKVLYDLGYLEFDEPF-TRLRLHGIITHLGAKMSK 592

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P E IE+ G DALR +L+       D  +   G++         G+   ++R 
Sbjct: 593 SRGNVVNPDEYIEKYGADALRTYLLFMGPYEDDNEFSVHGVQ---------GVSRFLNRL 643

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            S++   +D        +       + +  R +  +   +++   H ++A ++ + + + 
Sbjct: 644 YSLVDSRHD--------YGNGPGVDMKMLHRTIDRVTRGIEDLKYHTSIAALMEMSNWI- 694

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               A    E+ K   D A          ++ L ++L    P  A ++++ L
Sbjct: 695 ----ADVRSEMTKEQLDTA----------LKNLVLMLAPIAPHTAEELWERL 732



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 31/192 (16%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+ +  H+GH Y    AD   R+ R+ G +V    G D  G     
Sbjct: 41  ESKPKYYNLMEFPYPSGEGLHVGHVYTYSGADTNGRYRRMRGYNVFEPMGFDAFGIHSEN 100

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG- 117
            A   G+   V   +    FR+  + L   +D    + T++  ++   + L+ ++   G 
Sbjct: 101 YALKLGINPMVLTQRTVSRFREQMNRLGCMWDWSHEVNTSQPNYYKWTQWLFLQMYKAGL 160

Query: 118 DIYKGCYSGWYS-----LRDEAYYN------DDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
            + K     W       L +E   N      D EV           Q   VQW      F
Sbjct: 161 AVRKSAPVNWCPQCLTVLANEQVINGRCERCDTEV----------IQREMVQW------F 204

Query: 167 FRLSAYQDKLLS 178
           F+++ Y ++LL+
Sbjct: 205 FKITDYAERLLN 216


>gi|157964504|ref|YP_001499328.1| leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|166980080|sp|A8F1J5|SYL_RICM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157844280|gb|ABV84781.1| Leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 835

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N  N +     +  SYD
Sbjct: 86  KNNSHPKKWTYSNIENMKKQLKSMGFSYD 114


>gi|150401369|ref|YP_001325135.1| valyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|150014072|gb|ABR56523.1| valyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 906

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GHA      D++ARF R++  DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHALNWTYMDIIARFKRMNNYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDISYD 92
            +     TK                D+N    R+  + L IS D
Sbjct: 91  VEEIHGITKTDIDRHEFRKLCIELTDENIEKMREQINSLGISID 134



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 131/333 (39%), Gaps = 45/333 (13%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LPI+   E     K G K+L+      D               W+D+    +  T +  N
Sbjct: 427 LPIDPTKECPYTCKCGNKNLTPETDVLD--------------TWMDSSITPMAITEWETN 472

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +    ++ P  L   G DI+R  A Y    +  L+   P  + V +       G K+SK
Sbjct: 473 NEFFNKRY-PVQLRPQGHDIIRTWAFYTIIKSIALTDKKPWDEIVINGMVFGEDGHKMSK 531

Query: 306 SLGNVIDPIEVIEEVGVDALRY------------FLVREIACGK---DGFYDKDGLKK-R 349
           S GNV++P E+ ++ G DALR             F  +E+  G      F++     K  
Sbjct: 532 SRGNVVEPFEITKDYGADALRLWASNSTIGNDVPFAWKEVDYGYRFLRKFWNASRFAKMN 591

Query: 350 VNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDES----ILSVCSRVLQEIREN 404
           ++ +    I N ++ S + +I+   D  I  P      D      ILS  +R+++ +  +
Sbjct: 592 LDDETIETIKNSINDSKIKLIVGGNDVEISNPCNCVNVDNPVDLWILSKLNRLIENVSND 651

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQL 458
           ++N   +  +  +   V     D Y +  K     K + ++A        Y    VI  +
Sbjct: 652 LENYKFN-TVGDIEKFVWHDLCDNYIEMVKYRLYNKEDSEKAKISKFNAQYTLYTVITTV 710

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             L+  F P  ++ + +I  + D +  +  +D+
Sbjct: 711 LKLMAPFTPHFSDIVGEIYKIDDLHGSWCKVDK 743


>gi|29375585|ref|NP_814739.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257421252|ref|ZP_05598242.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779257|ref|ZP_06744661.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|81437154|sp|Q836V1|SYI_ENTFA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29343046|gb|AAO80809.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257163076|gb|EEU93036.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453624|gb|EFG22022.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 926

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 576 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 629 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 684

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 685 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 743

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 744 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 775



 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 118 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPIYWSPSSESSLAEAEI 198


>gi|329962854|ref|ZP_08300739.1| isoleucine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529411|gb|EGF56324.1| isoleucine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 1162

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 10/101 (9%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           + +PAD    G D  R      HAI    F  +A     K V S+G +L K G K+SK L
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMIFDSTAY----KAVISNGLVLDKNGNKMSKRL 715

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           GN +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 716 GNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|295113823|emb|CBL32460.1| Isoleucyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 926

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 576 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 629 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 684

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 685 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 743

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             + +  L  LL   +P  A +I+  L
Sbjct: 744 FYQTLVSLTKLLTPIIPHTAEEIWSFL 770



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 118 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPIYWSPSSESSLAEAEI 198


>gi|294783857|ref|ZP_06749179.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479669|gb|EFG27448.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 933

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G      P 
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLHR---PC 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G+K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGKKMSKSLGNTVAPSD 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  AKA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGLAKAREMSPLEIRKRCEEYARKW------VGIQKEQFIRLGVLGNWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +       L+ +I +KG I+KG    ++S   E    + E+
Sbjct: 162 PKFEAKQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEI 203


>gi|290893253|ref|ZP_06556240.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290557235|gb|EFD90762.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307571243|emb|CAR84422.1| leuS [Listeria monocytogenes L99]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 641 GTLAEKVTTDANANLEKAYHHMVKT 665



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKG 122
            Y+ 
Sbjct: 151 AYEA 154


>gi|282858941|ref|ZP_06268081.1| leucine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588323|gb|EFB93488.1| leucine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 960

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  DKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
           A   G    +  ++N   +R+  D +   +  D  +RT + +++
Sbjct: 89  AIQTGQHPAITTEKNIARYREQLDKIGFCFDWDREVRTCDPKYY 132


>gi|217964190|ref|YP_002349868.1| leucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|224499242|ref|ZP_03667591.1| leucyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|254782504|sp|B8DFR1|SYL_LISMH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217333460|gb|ACK39254.1| leucyl-tRNA synthetase [Listeria monocytogenes HCC23]
          Length = 803

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANANLEKAYHHMVKT 662



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|91205126|ref|YP_537481.1| leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990937|sp|Q1RJS2|SYL_RICBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91068670|gb|ABE04392.1| Leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 831

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 25  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVVARFMTMQGFNVLHPMGWDSFGLPAENAAI 84

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N  N +     +  SYD
Sbjct: 85  KNNSHPKEWTYSNIENMKKQLKSMGFSYD 113


>gi|73666911|ref|YP_302927.1| leucyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|123759459|sp|Q3YSH6|SYL_EHRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72394052|gb|AAZ68329.1| leucyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 829

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ + Y+     YP+   H+GH     I DV+AR+ R  G++V    G D  G     AA
Sbjct: 23  KKAQCYVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGINVFHPIGWDAFGLPAENAA 82

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            +  +  + +   N  N R     + +SYD
Sbjct: 83  LSYNINPQTWTKNNIDNMRCQLKSIGLSYD 112


>gi|326436029|gb|EGD81599.1| leucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 845

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+   H+GH     I+D +ARFHRL G +V+   G D  G     AA 
Sbjct: 65  RSKFYALAMFPYPSGALHMGHVRVYTISDSVARFHRLTGKEVIHPMGWDAFGLPAENAAI 124

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++  D L  S+D    + T    ++   + L+ ++  +G +Y+
Sbjct: 125 ERNIDPADWTIRNIAYMKEQLDALACSFDWEREVTTCSPSYYKWTQWLFLQLHKRGLVYQ 184


>gi|330944522|ref|XP_003306389.1| hypothetical protein PTT_19524 [Pyrenophora teres f. teres 0-1]
 gi|311316121|gb|EFQ85512.1| hypothetical protein PTT_19524 [Pyrenophora teres f. teres 0-1]
          Length = 1448

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 15/200 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER   Y+     YP+   H+GH     I+DVLARF  + G  VL   G D  G     AA
Sbjct: 117 ERGNAYVLPMFPYPSGTLHLGHLRVYTISDVLARFKHMQGYKVLHPIGWDAFGLPAENAA 176

Query: 63  QNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              GV  + +  QN        ++M    D  +D  IRT +   +   + ++  +   G 
Sbjct: 177 IERGVHPEKWTLQNIEAMKAQMKEMGGRWD--WDAEIRTCDPDFYKHTQRIFLMLHQHGL 234

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      Y   D+    +++V   A+G  + +     + M ++ +F ++  +Q+ LL 
Sbjct: 235 AYQAESLVNYDPVDQTVLANEQV--DANGFSWRSGAKVEKVMLKQ-WFLKIKEFQEPLLK 291

Query: 179 YYES------HPEFILPIER 192
             ++       PE +L ++R
Sbjct: 292 DLDALARDGRWPEKVLAMQR 311


>gi|256617927|ref|ZP_05474773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256962571|ref|ZP_05566742.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256597454|gb|EEU16630.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256953067|gb|EEU69699.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 928

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 524 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 578 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 630

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 631 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 686

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 687 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             + +  L  LL   +P  A +I+  L
Sbjct: 746 FYQTLVSLTKLLTPIIPHTAEEIWSFL 772



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 60  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 119

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 120 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 180 KGLKPIYWSPSSESSLAEAEI 200


>gi|255026411|ref|ZP_05298397.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 728

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 443 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 502

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 503 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 562

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 563 GTLAEKVTTDGNANLEKAYHHMVKT 587


>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|167646113|ref|YP_001683776.1| valyl-tRNA synthetase [Caulobacter sp. K31]
 gi|167348543|gb|ABZ71278.1| valyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 907

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +  +   AKF+P    V G DI+     +W A ++   +  
Sbjct: 473 VLDTWFSSALWPFSTLGWPEKTE-DLAKFYPTSTLVTGFDII----FFWVARMMMMGIHF 527

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +P K+VF +  +   KG K+SKS GNV+DP+ +I+E+G DA+R+ +       +D
Sbjct: 528 MGEVPFKQVFINALVRDEKGAKMSKSKGNVLDPLVLIDELGCDAVRFTMTAMSGQARD 585



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          HIGHA    + DVL RFHR+ G   L+  GTD           +AG+ T++ V++ 
Sbjct: 50 HIGHALNNTLQDVLTRFHRMRGKSALWLPGTD-----------HAGIATQMVVERQ 94


>gi|1890130|gb|AAB49704.1| valyl tRNA synthetase [Arabidopsis thaliana]
          Length = 1107

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    W A ++  
Sbjct: 615 DPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFF----WVARMVMM 668

Query: 283 NLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L       KV+ H  I    G K+SKSLGNVIDP+EVI  V +  L   L       
Sbjct: 669 GMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLGGLHKRLEEGNLDP 728

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           K+    K+G  K    D  NGI    + ++   L  Y
Sbjct: 729 KEVIVAKEGQVK----DFPNGIPECGTDALRFALVSY 761



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 184 HIGHALTSAIEDTIIRWKRMSGYNALWVPGVD-----------HAGIATQVVVEKKIMRD 232

Query: 81  RDMADVLDISYDDFIRTTEK 100
           R M    D+  ++F++   K
Sbjct: 233 RGMTR-HDVGREEFVKEVWK 251


>gi|51246404|ref|YP_066288.1| isoleucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826763|sp|Q6AK45|SYI_DESPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50877441|emb|CAG37281.1| probable isoleucyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 939

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++       D+         PADL++ G D  R  F +    A       
Sbjct: 531 ILDVWFDSGSSFAAVCELRDDLVA------PADLYLEGSDQHRGWFQSSLITATGTRGYA 584

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HG+++  +G+K+SKS+GNV+ P EVI+E G + LR ++  E
Sbjct: 585 PF-KGVLTHGYVVDGQGKKMSKSVGNVVAPQEVIDEYGAEILRLWVSSE 632



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA+  I+ D++ R  R  G +  +  G D HG  I
Sbjct: 58  YANGHIHLGHAFNKILKDIILRSKRASGFNAPYVPGWDCHGLPI 101


>gi|45359037|ref|NP_988594.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74553693|sp|Q6LX78|SYI_METMP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|45047912|emb|CAF31030.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 1034

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 24/207 (11%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +K   HGF L + GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +    +
Sbjct: 583 EKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRFSYSEM 642

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIR 402
            +     + N + N  + S + M+L D+   +P    F    + D  ILS  + V +E  
Sbjct: 643 DE--TRSMLNTLWNSYAFSANYMVLDDF---VPNNEYFKHVKDEDAWILSRINTVAKEAV 697

Query: 403 ENMQNQLIHR---ALAQVISLVSEVDRYFDA---QKPWELKKTNPDRAST--VLYVTVEV 454
           E ++   +H    AL   I  +++  R++      + W ++K +  + S    LY    V
Sbjct: 698 EALEKPHLHVYTWALRDFI--LNDFSRWYIKLIRDRTW-MEKNDVQKLSAYQTLYY---V 751

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           I +L  ++    P L+ +I+  L   D
Sbjct: 752 IMKLISIMAPVTPHLSEEIYQNLKTED 778



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 40 YFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96


>gi|89895904|ref|YP_519391.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670334|ref|YP_002460769.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997225|sp|Q24SP5|SYL_DESHY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782494|sp|B8FUR3|SYL_DESHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89335352|dbj|BAE84947.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540594|gb|ACL22333.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 827

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 6/184 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  DKPKFYALAMFPYPSGNLHMGHVRNYSIVDVIARFKRMRGYNVLHPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N  N +     + ISYD    + T    ++   + ++ +    G +Y
Sbjct: 91  IKNQTPPAEWTWKNIANMKRQLQEMGISYDWEREVTTCHPDYYKFTQWIFLEFYKHGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V  GA  +   A    V   + E +FF+++ Y   LL   
Sbjct: 151 KKKAGVNWCPSCATVLANEQVVDGACERCDTA----VTKKDLEQWFFKITDYAQVLLDDL 206

Query: 181 ESHP 184
           E  P
Sbjct: 207 EKLP 210



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 31/196 (15%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +   G K+SKS GNV+ P E+I + G D  R F++      +D  ++  G++  
Sbjct: 571 LLTQGMVCLGGAKMSKSKGNVVSPEEIISKYGADTARLFILFAAPPERDLEWNDQGVE-- 628

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILSV---CSRVLQEIR 402
                  G    ++R V  +   Y+ ++ T GA    F E D++   +     + +Q + 
Sbjct: 629 -------GCYRFLNR-VWRLAAQYEEVLKTTGAGANEFGELDKAAKDMRRQTHQTIQRVT 680

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++  +   + A++ ++ LV+ +  Y   ++P              L V  E +  + IL
Sbjct: 681 SDVGARFNFNTAVSAIMELVNAL--YLYKEQP-----------QVNLAVAREALESILIL 727

Query: 462 LQAFVPKLANKIFDIL 477
           L  F P +  +I+  L
Sbjct: 728 LAPFAPHITEEIWSEL 743


>gi|307278946|ref|ZP_07560005.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
 gi|306504333|gb|EFM73544.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
          Length = 933

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|255725760|ref|XP_002547809.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240135700|gb|EER35254.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 15/217 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH     I+DV+ARF RL+G +V+   G D  G     AA  
Sbjct: 60  ETFYSLSMFPYPSGVLHLGHLRVYTISDVVARFKRLNGYNVIHPMGWDAFGLPAENAAVE 119

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +    + + N    +   ++   D  ++  + T+   ++   + ++  + ++G  Y+ 
Sbjct: 120 RNINPAEWTEMNIAKMKQQTEIFLADFDWEREVNTSSPEYYKWTQKIFLMLFERGLAYRN 179

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LSY 179
                +   D+    +++V   ADG+ + +    V+    + +F R++ Y  +L   L Y
Sbjct: 180 YSEINWDPVDQTVLANEQV--DADGRSWRSGAI-VEKKFLKQWFIRITEYAKELNHDLKY 236

Query: 180 YESHPEFILPIERR-------NEVISFVKSGLKDLSL 209
             + P  +  +++         E++  + SG  D+ +
Sbjct: 237 LNNWPSKVKTMQKNWIGESTGTEIVIPLDSGFGDVKV 273


>gi|184200963|ref|YP_001855170.1| leucyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581193|dbj|BAG29664.1| leucyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 836

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 14/196 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           E+ Y+     YP+   H+GHA    + DV+AR+      DV+   G D  G     AA  
Sbjct: 41  ERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYWWHRSYDVMHPVGWDSFGLPAENAAIK 100

Query: 63  --QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              +    T   +D    +F+  A  +   +D  I T++  ++   + L+ +    G  Y
Sbjct: 101 RDAHPAEWTYRNIDTQRESFKRYA--ISADWDREIHTSDPEYYRWTQWLFLQFYSHGLAY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--- 177
           +      +  +D+    +++V  GA        H PV       ++F+++ Y  +LL   
Sbjct: 159 RKDSPVNWCPKDQTVLANEQVVNGA----CERCHTPVTKKSLNQWYFKITDYAQRLLDDM 214

Query: 178 SYYESH-PEFILPIER 192
           +  E H PE +L ++R
Sbjct: 215 TELEGHWPERVLAMQR 230



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 37/262 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           ++ P D +V G +    H +Y   F        L+    P  K + + G +L+ G+ +SK
Sbjct: 547 RWLPVDQYVGGVEHAILHLLYSRFFTKALYDFGLVGFTEPF-KALLNQGQVLNGGKAMSK 605

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA-NGIGNLVSR 364
           SLGN +D  E ++  GVDA+R  +V       D  +          AD++  G    ++R
Sbjct: 606 SLGNGVDLGEQLDAFGVDAVRLTMVFASPPEDDVDW----------ADVSPQGSQKFLAR 655

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +  +     D       +F + D+++ S   R + +  + + +   +  +A+ + LV+ V
Sbjct: 656 AWRLA---QDCTADPAASFADGDKALRSATHRTVADAEQLLDSGKFNVVIARTMELVNTV 712

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +  D          +P           E +  +AILL    P  A  ++ +  +  E+ 
Sbjct: 713 RKAIDTG----CGPADP--------AVREAVEAVAILLSLVAPYTAEDMWHL--IGHEDT 758

Query: 485 CFQSLDQRLKPGFMLHKTFDPI 506
             ++    + P  ++  T   +
Sbjct: 759 VVRAPWPTVDPALLVEDTVTAV 780


>gi|183235653|ref|XP_001914276.1| valyl tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|169800428|gb|EDS88947.1| valyl tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 675

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 36/240 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           I++  DP  ++  W  +     +  G+   P+ +K   K++P +L   G DI+ F    W
Sbjct: 194 IELKQDPD-VLDTWFSSGLFPFSVMGW---PEQTKDLEKYFPGELLETGNDIIFF----W 245

Query: 276 PAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++  +L L      K+V  H  +   +G K+SKSLGN+IDPI+VIE + +  L   L
Sbjct: 246 VARMVMMSLELMDCLPFKEVLFHSIVRDAQGRKMSKSLGNIIDPIDVIEGISLKGLNDKL 305

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  K+     +G KK    D  NGI    + ++   L  Y          T+  + 
Sbjct: 306 YTYNLPEKECVIAAEGQKK----DFPNGIEECGTDAMRFALLAY---------MTQGHDI 352

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            L + +RV+     N  N+L +      ++   +    F AQ+ +E+KKTN      +L+
Sbjct: 353 NLDI-NRVVG--YRNFCNKLWNAFKFSTMNFRKD----FKAQETFEIKKTNSRLDQWILH 405


>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|254782368|sp|A9VTD5|SYI_BACWK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|315126084|ref|YP_004068087.1| isoleucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014598|gb|ADT67936.1| isoleucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 942

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++ + P  K+V +HGF +   G K+SKSLGNVI P
Sbjct: 561 PADLYLEGSDQHRGWFMSSMMTSVAINGHAPY-KQVLTHGFTVDENGRKMSKSLGNVISP 619

Query: 314 IEVIEEVGVDALRYFLV 330
             V+ ++G D LR ++ 
Sbjct: 620 QNVMNKLGADILRLWVA 636


>gi|254670772|emb|CBA07066.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDSIDLDKL 575



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 913

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 538 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 596

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 597 KKIMDQLGGDILRLWV 612



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|222053500|ref|YP_002535862.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221562789|gb|ACM18761.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 924

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++     + DN         PAD+++ G D  R  FH+    +       
Sbjct: 530 ILDVWFDSGVSHAAVLEHRDNLSS------PADMYLEGSDQHRGWFHSSLLASVGTRGVA 583

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF++   G K+SKS+GNV+ P +VI++ G + LR ++  +
Sbjct: 584 PY-KAVLTHGFVVDGSGRKMSKSVGNVVAPEDVIKKYGAEVLRLWVAAQ 631



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K + K  +     Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I  +
Sbjct: 45  KGKPKYILHDGPPYANGHIHIGHALNKILKDIVLKSKRMSGFDAPYIPGWDCHGLPIELQ 104

Query: 61  AAQNAGVT----TKVFVDQNSRNFRDMADVLDISYDDFIR 96
             +N G      TK+ + +  R +      +DI   +F R
Sbjct: 105 VEKNLGSKKHEITKLEMRKQCREY--AKKFVDIQKQEFER 142


>gi|107023450|ref|YP_621777.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690532|ref|YP_836155.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123071992|sp|Q1BUA1|SYI_BURCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200198|sp|A0K9T5|SYI_BURCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|105893639|gb|ABF76804.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648621|gb|ABK09262.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 56  RPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|148654888|ref|YP_001275093.1| isoleucyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566998|gb|ABQ89143.1| Isoleucyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 1069

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V   G IL  +G+K+SKS GNV+DP  V+ E G DALR++L      G    +  
Sbjct: 582 PAFKNVICLGHILDAEGQKMSKSRGNVVDPWMVMNEHGADALRWYLFTAAPPGSPRRFSA 641

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---------PGAFTESDESILSVC 394
             + + +   L   + N  +  V+    + DG  P          P   T  D   L+  
Sbjct: 642 GLVAESLRKFLLT-LWNTYAFFVTY--ANLDGWSPGNNGVAEHLDPATLTPIDRWALARL 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-E 453
           + +++++    +   +  A   +   V E+  ++  +      K+  DR     Y T+  
Sbjct: 699 NSLVRDVTAAFEAYDVTTAGRAIEDFVDELSNWYVRRNRRRFWKSEHDRDKQAAYATLYT 758

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            +  +A L+  F+P +A+ I+
Sbjct: 759 CLLTVAKLVAPFIPFVADAIY 779


>gi|9755723|emb|CAC01835.1| valine--tRNA ligase-like protein [Arabidopsis thaliana]
          Length = 1093

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP--IERRNEVISFV-KSGLKDLSLSRKTFDWGIKIP 221
           +F  +    +K L   E+    I+P   E+  E    V KS  + L  + + +   ++I 
Sbjct: 630 WFVHMDPLAEKALLAVENKELTIIPERFEKDCEEDYIVAKSAEEALEKALEKYGKDVEIY 689

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            DP  ++  W  +     +T G+ D        F+P ++   G  ++            +
Sbjct: 690 QDPD-VLDTWFSSSLWPFSTLGWPDVAAKDFNNFYPTNMLETGMVMMGIE--------FT 740

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             +P    V+ HG I   +G K+SKSLGNVIDP++ I++ G DALR+     IA G  G
Sbjct: 741 GTVPF-SHVYLHGLIRDSQGRKMSKSLGNVIDPLDTIKDFGTDALRF----TIALGTAG 794


>gi|46907891|ref|YP_014280.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|226224263|ref|YP_002758370.1| leucyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|60390717|sp|Q71Z07|SYL_LISMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|259511547|sp|C1KVV9|SYL_LISMC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46881160|gb|AAT04457.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225876725|emb|CAS05434.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328474001|gb|EGF44814.1| leucyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 803

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANANLEKAYHHMVKT 662



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|254247426|ref|ZP_04940747.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872202|gb|EAY63918.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|320546329|ref|ZP_08040648.1| isoleucine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449050|gb|EFW89774.1| isoleucine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 932

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G ++  +  +   +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSW---NGVMNAREDLE---YPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEIPL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++           R+    ++DKG 
Sbjct: 118 TEYLAMCREYALSQVDKQREDFKRLGVSADWE-NPYVTLIPAYEAAQIRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|255974072|ref|ZP_05424658.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|255966944|gb|EET97566.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
          Length = 928

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 524 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 578 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 630

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 631 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 686

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 687 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             + +  L  LL   +P  A +I+  L
Sbjct: 746 FYQTLVSLTKLLTPIIPHTAEEIWSFL 772



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 60  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 119

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 120 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 180 KGLKPIYWSPSSESSLAEAEI 200


>gi|255324046|ref|ZP_05365171.1| leucine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255298903|gb|EET78195.1| leucine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 950

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EKL +     YP+ A  H+GH    I  D  AR++R+ G +VL T G D  G    + A
Sbjct: 54  KEKLNVQDMFPYPSGAGLHVGHPLGYIATDTYARYNRMLGKNVLHTLGYDAFGLPAEQYA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +   + N  N R   D+L + +D
Sbjct: 114 IQTGTHPRTTTEANIENMRRQLDMLGLGHD 143


>gi|255522165|ref|ZP_05389402.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 803

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 518 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 578 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 637

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 638 GTLAEKVTTDANANLEKAYHHMVKT 662



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151


>gi|253682435|ref|ZP_04863232.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562147|gb|EES91599.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 812

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKK 289
           Y+DN +  KA       K  P D +V G +    H +Y   F+  A       N   P K
Sbjct: 499 YVDNNNSEKAFDIDKVNKMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFK 557

Query: 290 VFSH-GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +H G IL   G K+SKS GN I P + I+E G D  R +L+   A  + G +  D +K
Sbjct: 558 SLTHQGLILGPDGLKMSKSKGNTIAPDDYIKEYGADVFRMYLMFGFAYSEGGAWSDDAIK 617

Query: 348 KRVNADLANGIGNLVSRSVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
                     +G  + + V  +L D    ++    T     ++++ +       +Q I E
Sbjct: 618 ---------SMGRFIDK-VERLLDDAKEEFNNSKNTKSTMEKAEKELNYARHYAIQHITE 667

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +      + A+A+++   + + +Y + +
Sbjct: 668 DTDKFQFNTAIARIMEYTNSLSKYLNEE 695



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+ A+ H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSGAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    QN +N  +    +    ++D  I T    ++   + ++ K+ +KG  Y+
Sbjct: 91  KTGIHPQDSTMQNIKNMEEQLKAMGAMFNWDHEIVTCLPDYYKWTQWVFLKLYEKGLAYR 150


>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|118576439|ref|YP_876182.1| leucyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194960|gb|ABK77878.1| leucyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 373

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF 47
          E+ K +I+ A  YPN+  HIGH     +ADV AR+HR+ G +VLF
Sbjct: 27 EKPKKFITVAYPYPNSPQHIGHGRTYTLADVHARYHRMKGYNVLF 71


>gi|53803700|ref|YP_114671.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81681450|sp|Q605M7|SYI_METCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53757461|gb|AAU91752.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 939

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +        NPD +    +PADL++ G D  R  F +    +  +S   P  
Sbjct: 536 VWFDSGVTHHAVLA--QNPDLA----FPADLYLEGSDQHRGWFQSSLMTSVAMSGQAPY- 588

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K V +HGF +  +G+K+SKS GNV+ P +V++ +G D LR ++ 
Sbjct: 589 KAVLTHGFTVDAEGKKMSKSRGNVVAPQKVMQTLGADVLRLWVA 632



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 15/102 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+K  +     Y N + HIGHA   I+ D + +   L G D  +  G D HG        
Sbjct: 47  RDKFILHDGPPYANGEIHIGHAVNKILKDFIVKSRTLSGFDAPYVPGWDCHGLPIELMVE 106

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADV-LDISYDDFIR 96
           +KI KA        KV   +  +  R+ A   +D+   +FIR
Sbjct: 107 KKIGKAGH------KVSPAEFRKACREYAAAQVDLQRREFIR 142


>gi|328957135|ref|YP_004374521.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673459|gb|AEB29505.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 929

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D++ R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGNIHIGHALNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKG 117
            +   FR +      + ++   +DF R            T  K + +    ++ K+++KG
Sbjct: 115 MSLAEFRKLCEEYAWEQVNKQKEDFKRLGVAGEWDHPYVTLTKEYEEAQIRVFGKMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 YIYKGLKPIYWSPSSESALAEAEI 198



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAVLRARENLT------FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S G +L   G K+SKSLGN I P +VI+++G D +R ++
Sbjct: 576 PY-KTVLSQGMVLDGDGRKMSKSLGNTIAPSKVIKQMGADIVRLWV 620


>gi|256852656|ref|ZP_05558027.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300859774|ref|ZP_07105862.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|256712001|gb|EEU27038.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300850592|gb|EFK78341.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 926

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 576 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 628

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 629 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 684

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 685 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 743

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             + +  L  LL   +P  A +I+  L
Sbjct: 744 FYQTLVSLTKLLTPIIPHTAEEIWSFL 770



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 118 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPIYWSPSSESSLAEAEI 198


>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 933

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 28/147 (19%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            VK  LK L L ++T             IM VW D+ +++    G L+  +G      P 
Sbjct: 519 LVKYNLKGLKLRKET------------NIMDVWFDSGSSH---RGVLEVWEGLHR---PC 560

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  FH     +   + + P  K V +HGF+   +G K+SKSLGN + P +
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPY-KSVLTHGFVNDGEGRKMSKSLGNTVSPED 619

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYD 342
           VI+  G D LR +      CG   + D
Sbjct: 620 VIKVYGADILRLW------CGSVDYRD 640



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQ 107

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTE 99
                  AKA + + +  +   ++ +R +      + I  + FIR            T +
Sbjct: 108 VVKEVGVAKAREMSALEIRKLCEKYARKW------VGIQKEQFIRLGVLGDWDNPYLTLD 161

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R       L+ +I + G I+KG    ++S   E    + E+
Sbjct: 162 PRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203


>gi|170733873|ref|YP_001765820.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254782375|sp|B1JXC3|SYI_BURCC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169817115|gb|ACA91698.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|76788731|ref|YP_327817.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123731254|sp|Q3KN03|SYI_CHLTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76167261|gb|AAX50269.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis A/HAR-13]
          Length = 1036

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           Y+   W D+         Y  +  + ++A F PAD    G D  R    ++   +++A L
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACF-PADFIAEGLDQTR--GWFYTLTVIAAAL 567

Query: 285 ---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG- 339
              P  K V  +G IL + G K+SK L N   P  +++  G DALR +L+  +    +  
Sbjct: 568 FDQPAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDL 627

Query: 340 -FYDK--DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            F DK  + + K+V   L+N +    + +    L  +D          E D  ILS    
Sbjct: 628 RFSDKGVESVLKQVLLPLSNALAFYKTYAE---LYGFDPKETDNIELAEIDCWILSSLYS 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVLYVTV 452
           ++ + RE+M    +H A+   +  + ++  ++     ++ W+ + +   RA+ + LY   
Sbjct: 685 LVGKTRESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLY--- 741

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
           EV+   + ++  F+P +A  ++  L
Sbjct: 742 EVLVVFSKVIAPFIPFIAEDMYQQL 766


>gi|302390181|ref|YP_003826002.1| Isoleucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200809|gb|ADL08379.1| Isoleucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 1045

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 19/263 (7%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++  W D+ +       Y  +N +  K  F PAD      D  R  F++++  + LL  +
Sbjct: 514 VIDCWFDSGSMPFAQLHYPFENEETFKTHF-PADFISEAIDQTRGWFYSLFVISTLLFDD 572

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-VREIACGKDGFY 341
            P  K V   G +L + G+K+SK  GNV+DP E++ E G DA+R++L V         FY
Sbjct: 573 SPY-KNVLVMGHVLDQYGQKMSKHKGNVLDPWEILNEQGADAMRWYLYVASPPWNPSRFY 631

Query: 342 DKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPT-----PGAFTESDESILSVCS 395
                K+ V+      +G L +  S   +    D   P      P +  E D  +LS  +
Sbjct: 632 -----KEAVSEAQRRFLGTLWNIYSFFTLYASIDNFDPRKHSLDPKSRHEMDRWLLSRVN 686

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EV 454
              + +R+ +    I  A   +  LV ++  ++  +      K+  D+     Y+T+ E 
Sbjct: 687 STNRRVRKCLDGFDITTAARALEELVDDMSNWYVRRCRERFWKSEMDQDKIAAYLTLYEA 746

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           + +   +   FVP +  +++  L
Sbjct: 747 LVEFIKIAAPFVPFITEELYQNL 769



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 19/149 (12%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFVDQ 75
           N +PH GH    ++ D++ R+  + G  V    G D HG  +  +  +  G++ K  +++
Sbjct: 51  NGKPHAGHVLTRVVKDLIPRYKTMMGYRVDRKAGWDTHGLPVELEVEKQLGISGKPQIEE 110

Query: 76  -NSRNFRDMADVLDISYD-DFIRTTEK------------RHHDTC--RILW--KKISDKG 117
                F         +Y+ ++ R TE+             +H+T    + W  KKI +KG
Sbjct: 111 YGVEEFIKKCKNSVFTYEQEWKRMTERVGFWIDMENPYVTYHNTYIESVWWALKKIWEKG 170

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +YKG     Y  R     +  EV +G D
Sbjct: 171 LLYKGHKVVPYCPRCGTSLSSHEVAQGYD 199


>gi|300766055|ref|ZP_07076024.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|300513257|gb|EFK40335.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 521 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 580

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 581 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 640

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 641 GTLAEKVTTDANANLEKAYHHMVKT 665



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 150

Query: 119 IYKG 122
            Y+ 
Sbjct: 151 AYEA 154


>gi|262038685|ref|ZP_06012045.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747237|gb|EEY34716.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 932

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +   + + P  K++ +HGF++  +G K+SKSLGN I P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLLTSIASTKDAPY-KRILTHGFVMDGQGRKMSKSLGNTIVP 616

Query: 314 IEVIEEVGVDALRYFL 329
            ++IE+ G D LR ++
Sbjct: 617 KDIIEKYGADILRLWV 632



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-----AKAAQNAGVTT 69
           Y N   HIGHA   ++ D++ ++ RL G +  +  G D HG  I      +  + A   T
Sbjct: 65  YANGDIHIGHALNKVLKDIILKYKRLRGYNAPYIPGWDTHGLPIEWKIMEEYGEKARNMT 124

Query: 70  KVFVDQNSRNF------RDMADVLDI----SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            + + Q  + +      +  A+ + +    ++DD   T +  +      ++K+I + G +
Sbjct: 125 PLQIRQECKKYALKWVEKQKAEFIRLGILGNWDDPYITLKPEYEAEQLKVFKEIYENGYV 184

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG    ++S   E    + E+
Sbjct: 185 YKGLKPVYWSPTTETALAEAEI 206


>gi|237715648|ref|ZP_04546129.1| valyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262408657|ref|ZP_06085203.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294646688|ref|ZP_06724313.1| valine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294807118|ref|ZP_06765936.1| valine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229444357|gb|EEO50148.1| valyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262353522|gb|EEZ02616.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292637976|gb|EFF56369.1| valine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294445684|gb|EFG14333.1| valine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 878

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   + K++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|126739586|ref|ZP_01755278.1| isoleucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719232|gb|EBA15942.1| isoleucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 980

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 19/135 (14%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           V  G+ D     + FD           ++ VW D+ + +       D  DG++     AD
Sbjct: 571 VLEGIADAEAYEQVFD-----------VLDVWFDSGSTHAFV--LRDREDGTEDGI--AD 615

Query: 260 LHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV 316
           +++ G D  R  FH+    A       P  + V +HGF L  KG K+SKSLGN I P EV
Sbjct: 616 VYMEGTDQHRGWFHSSLLQACGTKGRAPY-RNVVTHGFTLDEKGMKMSKSLGNTIVPEEV 674

Query: 317 IEEVGVDALRYFLVR 331
           +++ G D LR ++ +
Sbjct: 675 VKQYGADILRLWVAQ 689



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           ER+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG       
Sbjct: 61  ERQPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDSRYVPGWDCHGLPIEWKI 120

Query: 56  -QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            ++  K  +N      V   Q  R F +    +DI  ++F R
Sbjct: 121 EEQYRKKGKNKDAVNVVEFRQECRKFAE--GWIDIQREEFKR 160


>gi|304320117|ref|YP_003853760.1| isoleucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299020|gb|ADM08619.1| isoleucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 962

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + + T        +  +   WPADL++ G D  R  F +       L    
Sbjct: 571 ILDVWFDSGSTHATVL------EAREDLRWPADLYLEGSDQHRGWFQSSLLIGCGLRERA 624

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P    + +HGF+L  KG K+SKSLGN + P +++++ G D LR ++ 
Sbjct: 625 PF-DGILTHGFVLDAKGYKMSKSLGNTVAPEDIVKKYGADILRIWVA 670


>gi|294506941|ref|YP_003570999.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343269|emb|CBH24047.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 863

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 11/185 (5%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++E+ Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 31  DQEEFYVLDMFPYPSGSGLHVGHPEGYTATDIVARYKRKQGFNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       +   ++N   F+     L  SYD    I TT+  ++   + ++ ++ +KG  
Sbjct: 91  ALKTNTHPRETTEKNIAQFKRQLKRLGFSYDWQREINTTDPDYYKWTQWIFLQLYEKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+     W+         ++EV  G ++   Y  +  P+ QW+       +++ Y D+LL
Sbjct: 151 YQSEEPVWWCEELGTVLANEEVIDGKSERGGYPCERVPMRQWV------LKITEYADRLL 204

Query: 178 SYYES 182
              E+
Sbjct: 205 EGLEA 209



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 31/176 (17%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +  K+SKS GNVI+P +V++E G D LR + +      +D  +  D ++         G+
Sbjct: 632 RSHKMSKSRGNVINPDDVVDEYGADTLRLYEMFMGPLEQDKPWSTDDME---------GV 682

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R   +++    G +    +  E D   L    R ++++ E+++ +  + A+A ++
Sbjct: 683 HRFLNRIWRLVVDADSGGLAV--SDEEPDREQLRTLHRTIKKVTEDIEARDFNTAIAAMM 740

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  +++ DA                   +  +V     +LL  F P LA +++
Sbjct: 741 EFVNAANKW-DA-------------------LPRQVATPFVLLLSPFAPHLAEELW 776


>gi|291166573|gb|EFE28619.1| leucine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 803

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 46/231 (19%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLL---SANLPLP-KKVFSHGFILHK-GEKISK 305
           +W P D +  G + +  H IY   W  FL    + + P P KK  + G IL   GEK+SK
Sbjct: 525 YWGPVDWYNGGMEHVSRHLIYSRFWHQFLHDIDAVSYPEPYKKRTAQGLILGPDGEKMSK 584

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNVI+P E+I+  G D LR +++        G Y++  +    +          V + 
Sbjct: 585 SRGNVINPNEIIDNYGADTLRTYIMF------IGDYERPAVWSDSSVKGCKRFLERVWKL 638

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             M+ +             E D+  +S+  + ++++ E+ +N   + A+A   ++++ V+
Sbjct: 639 QEMVTEQ-----------NEYDKKHISLMHKTIKKVSEDFENVKFNTAIA---AMMTAVN 684

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +++D +                 ++T + ++    LL    P +  +I+++
Sbjct: 685 QFYDDE-----------------FITRKELQDFITLLYPIAPHICCEIWEL 718



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 7/177 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K +      YP+ A  H+GH       +V++R  RL+G +VLF  G D  G      A
Sbjct: 31  KKKYFNLIEFPYPSGAGLHVGHIRAYTSLEVISRKRRLEGYNVLFPIGWDAFGLPTENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   D+N   F D       S+D    I TT+  ++   + ++ ++      Y
Sbjct: 91  MQTGEHPRTVTDRNIEVFTDQLKSAGYSFDWERTIDTTDPNYYKWTQWIFLQMFKHKLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K      +    +    ++E   G   +     H+ VQ ME++ +F ++  Y DKLL
Sbjct: 151 KDTTYVNFCNNCKVVLANEESQNGVCDR---CGHDVVQ-MEKDVWFLKIREYADKLL 203


>gi|290559901|gb|EFD93223.1| tRNA synthetase valyl/leucyl anticodon-binding [Candidatus
          Parvarchaeum acidophilus ARMAN-5]
          Length = 907

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 31/56 (55%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          +EK +I+  + YP+ + H GH Y    ADV ARF R+ G  VLF  G    G  +A
Sbjct: 31 KEKFFITVPVMYPDGRLHTGHMYTWTRADVFARFQRMKGKKVLFPQGFHMTGGPMA 86



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 15/96 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P DL V  K+++  H     AF +  ++ +      P+ V  +G++    +K+SKS G
Sbjct: 558 WYPLDLRVTAKELITNHI----AFFIMTHVAMFSKDKWPRGVGINGWLTVNKQKMSKSKG 613

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           N +    +++E G DA R      IA   +G  D +
Sbjct: 614 NSMTIESIVKEYGADAARL-----IASASNGMDDAE 644


>gi|284112383|ref|ZP_06386564.1| Isoleucyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283829710|gb|EFC34035.1| Isoleucyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 720

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           +WPA L++ G D  R  FH+    +       P  + V +HGF++  +G+K+SKS GNV+
Sbjct: 565 WWPASLYLEGSDQHRGWFHSALLSSVTTDNQAPY-RAVLTHGFVVDGQGKKMSKSAGNVV 623

Query: 312 DPIEVIEEVGVDALRYFLVRE 332
            P +VI++ G + LR ++  +
Sbjct: 624 SPQDVIKQHGAEILRLWVAAQ 644



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTK-VF 72
           Y N   HIGHA   I+ D++ +   ++G+   +  G D HG  I  +  +  G   K + 
Sbjct: 58  YANGHIHIGHALNKILKDIIVKSRTMEGMRSPYVPGWDCHGLPIEHQVTKQLGDKKKDMS 117

Query: 73  VDQNSRNFRDMADVL-DISYDDFIR------------TTEKRHHDTCRILWKKISDKGDI 119
             +  R  R+ AD   +I  D+F R            T +K +  T    + K  ++G +
Sbjct: 118 ATELRRQCREYADKFWNIQRDEFQRLGVLGDWERPYLTMDKAYEATIIREFGKFVERGGV 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG     +  +D+    + EV
Sbjct: 178 YKGLKPVLWCTQDQTALAEAEV 199


>gi|298346283|ref|YP_003718970.1| leucine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236344|gb|ADI67476.1| leucine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 973

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +REK +I     YP+ +  H+GH    I  DV+AR+HR  G +VL+T G D  G    
Sbjct: 51  LAKREKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYHRAQGKNVLYTMGYDAFGLPAE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    +    N  N       + +S+D
Sbjct: 111 QYALQTGQHPAITTHDNIANMSKQLARIGLSHD 143


>gi|197104810|ref|YP_002130187.1| valyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478230|gb|ACG77758.1| valyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 893

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +  +   A+F+P    V G DI+     +W A ++      
Sbjct: 452 VLDTWFSSGLWPFSTMGWPEQTE-DLARFYPTHTLVTGFDII----FFWVARMMMQGLHF 506

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +  +P  ++VF +  +    G K+SKS GNV+DP+E+++E G DALR+ L       +D
Sbjct: 507 TGQVPF-QRVFINALVRDATGAKMSKSKGNVMDPLELVDEFGADALRFTLTAMSGQARD 564



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 18/82 (21%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA    + DVL RF R+ G   L+  GTD           +AG+
Sbjct: 37  SIVIPPPNVTGSLHIGHALNNTLQDVLIRFERMRGKAALWLPGTD-----------HAGI 85

Query: 68  TTKVFVD-----QNSRNFRDMA 84
            T++ V+     + +++ RDM 
Sbjct: 86  ATQMVVERQLAQEGNQSRRDMG 107


>gi|48477604|ref|YP_023310.1| valyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74567946|sp|Q6L1N5|SYV_PICTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|48430252|gb|AAT43117.1| valyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 768

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 17/240 (7%)

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSH 293
           T+ ++ T YL + +      +PAD+   G DI+   A      ++L   ++P  KK+F  
Sbjct: 444 TSSISVTLYLMHINS--MNLYPADVRFQGHDIITSWAFTTILRSYLHYRDVPW-KKIFIS 500

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +    GEK+SKS GN+I+P  +IE+ G DALR++    +        ++D ++ R   
Sbjct: 501 GNVYDPYGEKMSKSKGNIIEPSTIIEKYGADALRFWASTTMPGENIKIREQDLVRGRKTV 560

Query: 353 -DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
             L N      +R V M+  +  G +      ++ +  IL+   + L+ + E M      
Sbjct: 561 IKLYNS-----ARLVLMLSDNIKGSM--DNIISQVNRWILTKFEKTLKNVTELMDGYYFS 613

Query: 412 RALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA +++ +    +  D Y +  K  E+K+   + A+   ++   +I+  + ++     +L
Sbjct: 614 RARSELDNFFWNIFCDNYLEIIKS-EIKRYPEETAAVSRFLMENIIKMYSPIMPFITEEL 672


>gi|297243031|ref|ZP_06926969.1| valyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889242|gb|EFH27976.1| valyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 23/225 (10%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFL 279
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L
Sbjct: 519 QDIMDTWATSSLTPQIVTRWEEPGEENQALFKATFPMDLRPQGQDIIRTWLFSTVDRAHL 578

Query: 280 LSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +  LP      S G+IL   HK  K+SKS GNV+ P + IEE G DA+RY+       G
Sbjct: 579 ENGCLPWKHAALS-GWILDPDHK--KMSKSKGNVVVPNKPIEEFGADAVRYWAT-SAKLG 634

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTES-DE 388
            D  YD+  +K  +   LA  + N    ++++  +D +  +  P +        TE  D 
Sbjct: 635 LDATYDEGQMK--IGRRLAIKLLNATKFALAIGREDEEHQVLEPASADWNFADVTEVLDR 692

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQK 432
           S+++  + V++   + +++    +AL  + +   E  D Y +  K
Sbjct: 693 SVMAKLASVIRTATDALESYEHSKALEAIETFFWEFCDDYIELAK 737



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARYKRMQGFDVFYPMGWDDNGLPTER 105

Query: 61  AAQN 64
             QN
Sbjct: 106 RVQN 109


>gi|164660544|ref|XP_001731395.1| hypothetical protein MGL_1578 [Malassezia globosa CBS 7966]
 gi|159105295|gb|EDP44181.1| hypothetical protein MGL_1578 [Malassezia globosa CBS 7966]
          Length = 1111

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)

Query: 255 FWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P DL   GKD++  H    IY  A L    L  P+ + ++G ++  G K+SKS GN +
Sbjct: 695 FYPMDLRSSGKDLINNHLTFCIYNHAALFPEEL-WPRGMRANGHLMLNGAKMSKSTGNSL 753

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
              + +E+ G DA R  L    A   DG  D +  +K  NA++
Sbjct: 754 SLRQAVEKFGADATRVSL----ADAGDGIEDANFEEKTANANI 792


>gi|7437544|pir||T10020 leucine-tRNA ligase (EC 6.1.1.4) - Mycobacterium leprae  (fragment)
 gi|2344830|emb|CAA94727.1| leucyl-tRNA synthase [Mycobacterium leprae]
          Length = 824

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGDGLHVGHPLGYIATDVYARYFRMTGHNVLHAMGFDAFGLPAEQYAM 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   ++  + N  NFR     L + +D
Sbjct: 129 QTGTHPRILTEANVVNFRHQLGRLGLGHD 157


>gi|257083914|ref|ZP_05578275.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256991944|gb|EEU79246.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315147954|gb|EFT91970.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
 gi|315173283|gb|EFU17300.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
          Length = 933

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|77412207|ref|ZP_00788527.1| leucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161748|gb|EAO72739.1| leucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 780

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 13/168 (7%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY 91
           D+L+RF R  G +VL   G D  G    + A + G     F  +N  NF+   + L  SY
Sbjct: 7   DILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSY 66

Query: 92  --DDFIRTTEKRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGAD-- 146
             D  + TT+  ++   + ++ K+ +KG  Y+      W      A  N++ +  G    
Sbjct: 67  DWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSER 126

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEFILPIER 192
           G Y   +    QWM       +++AY ++LL   E    PE I  ++R
Sbjct: 127 GGYPVVRKPMRQWM------LKITAYAERLLEDLEEVDWPESIKDMQR 168


>gi|68171788|ref|ZP_00545131.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88658156|ref|YP_507592.1| leucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123736387|sp|Q2GG41|SYL_EHRCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67998789|gb|EAM85498.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599613|gb|ABD45082.1| leucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 829

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ + Y+     YP+   H+GH     I DV+AR+ R  G++V    G D  G     AA
Sbjct: 23  KQAQCYVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGINVFHPIGWDAFGLPAENAA 82

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            +  +    + + N  N R     + +SYD
Sbjct: 83  LSYNINPHTWTESNIDNMRCQLKSIGLSYD 112


>gi|256371993|ref|YP_003109817.1| isoleucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008577|gb|ACU54144.1| isoleucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 1072

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 87/418 (20%), Positives = 158/418 (37%), Gaps = 84/418 (20%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LRD+      E Y+ +    +  +  P+ +     +F  ++A +D+LL+  ES     +P
Sbjct: 396 LRDQGALITQEDYEHSYPHCWRTE-TPLIYRAMSSWFVAVTALKDRLLAENESID--WVP 452

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQY------------------- 226
              ++        G +D S++R  + WG  IP    DDP Y                   
Sbjct: 453 AHVKHGAFGKWLEGARDWSITRNRY-WGAPIPVWRSDDPAYPRIDVYGSLDELERDFGVR 511

Query: 227 -------------------------------IMYVWIDALTNYLTTTGY-LDNPDGSKAK 254
                                          ++  W ++ +       Y  +N +  +A 
Sbjct: 512 PSDLHRPAIDELVRPNPDDPTGRSMMRRVPDVLDCWFESGSMPFAQLHYPFENKERFEAN 571

Query: 255 FWPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F PAD  V  +G+    F+ ++  A  L    P  +   +HG +L + G K+SK L N  
Sbjct: 572 F-PADFIVEYVGQTRGWFYTLHVLAVALFDRPPF-RHCIAHGIVLGNDGRKLSKRLRNYP 629

Query: 312 DPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           DP EV EE+G DA+R+FL+   I  G++   ++  +   V   + N + N  +  V    
Sbjct: 630 DPWEVFEEIGADAMRWFLLSSPILRGQEMLLERSAMVDTVRR-VINPLWNTFNFLVLYAR 688

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            D+        A    D  +L+    ++ E+ + M +  + RA        + V+R+ D 
Sbjct: 689 ADHLRGQRVHSATHVLDRYLLAATHDLVVEVTDAMDHFELSRA-------TTAVERHLDR 741

Query: 431 QKPWELKK-----------TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              W +++           T  D            +  LA++    +P L+  I+  L
Sbjct: 742 LTNWYVRRSRSRFWSRRDDTTEDAKREAYDTLHTALETLALVTAPLLPMLSEHIYRTL 799


>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 913

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 538 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 596

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 597 KKIMDQLGGDILRLWV 612



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|224011401|ref|XP_002295475.1| valyl-tRNA synthetase [Thalassiosira pseudonana CCMP1335]
 gi|209583506|gb|ACI64192.1| valyl-tRNA synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 989

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +  G+ +  D  KA F+P  L   G DIL F    W A ++   L L
Sbjct: 496 VLDTWFSSGLFPFSVLGWPEETDDFKA-FYPTSLLETGLDILFF----WVARMVMMGLQL 550

Query: 287 PKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDAL 325
             K+  H   LH       G K+SKSLGNVIDP+EVI    ++ L
Sbjct: 551 TDKLPFHTVYLHAMVRDKDGRKMSKSLGNVIDPLEVINGCTLETL 595



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 20/89 (22%)

Query: 10  STAIAYPNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           STAIA P+++               H+GHA    + D L R+HR+ G   L+  GTD  G
Sbjct: 29  STAIAKPDSEKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHATLYIPGTDHAG 88

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             IA  +    V  K+ + Q+++   D+ 
Sbjct: 89  --IATQS----VVEKMIMKQSNQTRHDLG 111


>gi|254455824|ref|ZP_05069253.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082826|gb|EDZ60252.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 896

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +   T +  L+  +  K   WPA +++ G D  R  FH+    +       
Sbjct: 519 IVEVWFDSGS---THSFVLEKREDLK---WPASMYLEGSDQHRGWFHSSLLESCGTRGRA 572

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + + SHGF++  KG K+SKSLGNVI P +++++ G D LR ++ 
Sbjct: 573 PF-ESILSHGFVVDGKGLKMSKSLGNVIAPEDILKKYGADILRIWVA 618



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          K +EK  +     Y N   H+G A   I+ D++ +FH++DG D ++  G D HG  I
Sbjct: 30 KGKEKFVLHDGPPYANGNIHMGTALNKILKDIIVKFHQMDGKDSIYVPGWDCHGLPI 86


>gi|299145099|ref|ZP_07038167.1| leucine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515590|gb|EFI39471.1| leucine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 944

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 913

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 538 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 596

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 597 KKIMDQLGGDILRLWV 612



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMAGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 913

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 538 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 596

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 597 KKIMDQLGGDILRLWV 612



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 50  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 106

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 107 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 164

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 165 KGYIYKGQKPVYWSPTSESALAEAEI 190


>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMSGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|219681524|ref|YP_002467909.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682080|ref|YP_002468464.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471205|ref|ZP_05635204.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782372|sp|B8D8V0|SYI_BUCA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782373|sp|B8D754|SYI_BUCAT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219621813|gb|ACL29969.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624367|gb|ACL30522.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086464|gb|ADP66545.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087045|gb|ADP67125.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 35/285 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW ++  N  TT  Y  N + +K     AD+ + G D  R  F +    + L+S   
Sbjct: 532 ILDVWFES-GNTHTTINY-KNKNYTKKN---ADMFLEGSDQHRGWFMSSLIISTLISEKK 586

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF++  KG+K+SKS+GN I P E+++ +G D LR ++        D     
Sbjct: 587 PYSE-VLTHGFVVDGKGQKMSKSIGNTISPNEIVDTLGADILRLWVASS-NYSNDISISN 644

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401
           + LK   ++D+   I N  +R +   + D+D    I +       D+  +     V +EI
Sbjct: 645 EILKS--SSDIYRRIRN-TARFMLANISDFDPKKNIISKENMVLLDKWAIGQTKIVQEEI 701

Query: 402 RENMQNQLIHRALAQVISLVS-EVDRYF---DAQKPWELKKTNPDRAST---VLYVTVEV 454
            ++  N   H  + +++   S E+  ++      + + LKK + +R S+   + Y+   +
Sbjct: 702 IQHYNNYNFHAVIQRLMYFCSIEMGSFYLDIIKDRQYTLKKHSQERRSSQTAIYYIINSL 761

Query: 455 IRQLAILLQ-------AFVPK------LANKIFDILFVADENRCF 486
           +R +A +L        +++P+         + FD LF  D++  F
Sbjct: 762 VRWIAPILSFTADEIWSYLPENNSQYVFMEEWFDKLFYLDQDDLF 806



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           +E++  ++     Y N   HIGHA   I+ D++ +   + G D  +    D HG    QK
Sbjct: 46  QEKKIFFLHDGPPYANGNIHIGHAVNKILKDIIIKSKNMSGFDAPYIPSWDCHGLPIEQK 105

Query: 58  I-AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +  K   N G  +     +  R +    D ++    DFIR
Sbjct: 106 VEEKIKSNQGEISTTEFQEKCRKY--AQDQVEKQKKDFIR 143


>gi|172061472|ref|YP_001809124.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254782374|sp|B1YVA4|SYI_BURA4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171993989|gb|ACB64908.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDFAQHAVPV-DEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY +T 
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTH 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A K+F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|13357931|ref|NP_078205.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762455|ref|YP_001752454.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|14285782|sp|Q9PQC0|SYL_UREPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083178|sp|B1AJ10|SYL_UREP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|11271161|pir||F82899 leucyl-tRNA synthetase UU371 [imported] - Ureaplasma urealyticum
 gi|6899353|gb|AAF30780.1|AE002134_4 leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168828032|gb|ACA33294.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGADTLRIY 606


>gi|331700370|ref|YP_004336609.1| leucyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326955059|gb|AEA28756.1| leucyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 956

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ER+K+Y+     YP+ A  H+GH    I  DVL R+ R+ G +VL   G D  G    +
Sbjct: 58  SERKKVYLLDMFPYPSGAGLHVGHPLGFIGTDVLGRYLRMTGHNVLHAMGFDAFGLPAEQ 117

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            A   G   +   + N   +R+    L +++DD
Sbjct: 118 YAVQTGTHPRTTTEANIARYREQLRQLGLAHDD 150


>gi|316974706|gb|EFV58184.1| leucyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1175

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 31/232 (13%)

Query: 255 FWPADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           ++P DL V GKD+++ H  Y        WP    S     P+ V+++G +L   EK+SKS
Sbjct: 664 WYPVDLRVSGKDLIQNHLTYYLYNHVAMWP----SDPSKWPRSVWANGHLLLNNEKMSKS 719

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN +  +E +E    D +R  L    A   D   D + ++   +A +   + N ++  +
Sbjct: 720 TGNFLTLVEAVERYSADGMRLAL----ADAGDSIEDANFMETMADAGVLR-LYNFLTWVI 774

Query: 367 SMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             I    +     P  F E   ++ ++   ++  E  ENMQ + + +  +      +  D
Sbjct: 775 ESITSLDEMANHPPSTFPELIFQNDINKYVQISAENYENMQFKEVVK--SAFFEFQAARD 832

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           RY    + W +   N +       + +  I   AI+L    P +   I+ +L
Sbjct: 833 RY----REWSMMALNRN-------LILRFIETQAIILSPICPHICEAIWKLL 873


>gi|294633164|ref|ZP_06711723.1| methionine-tRNA ligase [Streptomyces sp. e14]
 gi|292830945|gb|EFF89295.1| methionine-tRNA ligase [Streptomyces sp. e14]
          Length = 671

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 107/515 (20%), Positives = 191/515 (37%), Gaps = 47/515 (9%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +++ +    PN   H+GH +   + AD   RF R+ G +    TG+D++   +   A+  
Sbjct: 124 VFVFSTPPTPNGDLHLGHLSGPYLGADAYVRFQRMRGAEAWHLTGSDDYQSYVVDRARRE 183

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKGDIYKGCY 124
                   +  S        ++DI  D +  T E   + D  R  + K+ D G +     
Sbjct: 184 EREPARTAEHYSAEIAATLRLMDIEVDQYTVTNEDPGYRDGLRGYFSKLVDSGAVTVRQT 243

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
                   +AY  + +V  G  G       N  +   E      L    D   S  ++ P
Sbjct: 244 PALVDDGTDAYLYEVDVSGGCPGCGGGTSGNICEECGEPNVCVDLV---DPRSSRSQAPP 300

Query: 185 E------FILPI-ERRNEVISFVKSG--------LKDLSLSRKTF--------DWGIKIP 221
           +      F+LP+ E   EV    + G        L D   +R           DWG+   
Sbjct: 301 KRRPVARFVLPLHEFGGEVADHHRLGRVPARLRELADRVFARPRLDLPVTHPSDWGVAPA 360

Query: 222 D---DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILRF 270
           +   D Q +++VW +    +L     L    G   + W A         +H  G D   +
Sbjct: 361 ETTVDGQ-VIWVWPEMSYGFLHGVEAL---GGRLGRDWQALTPEQDWKFVHFFGYDNSFY 416

Query: 271 HAIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           HA+ +PA    A       +  H   F L +  K S S  + I   +++    VDA+RY+
Sbjct: 417 HAVLYPALYRLAYPRWNPDIDYHVNEFYLLEDGKFSTSRRHAIWGKQILRPETVDAVRYY 476

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L           +  +   + V   L +G    ++   + +   Y G+ P  G +T    
Sbjct: 477 LSLTRPERHRTNFALEAYTETVRRVLVDGWQGWLNDLGARVAGQYGGVAPDAGVWTPEHT 536

Query: 389 SILSVCSRVLQEIRENMQNQ--LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           + L+     L  + ++       ++RA A++  +V +  R+ +A+    L     D A T
Sbjct: 537 AFLNGLGIRLAAVADSYGQDGFSLNRAAAELDGIVVDARRFAEAEARTALIAGWQDEART 596

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + + +   R LA      +P+ A ++   L   D
Sbjct: 597 AVALELAAARLLARAATPIMPRFAARLARALGTTD 631


>gi|170697699|ref|ZP_02888787.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170137447|gb|EDT05687.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDFAQHAVPV-DEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY +T 
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTH 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A K+F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|87312256|ref|ZP_01094356.1| valyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87285032|gb|EAQ76966.1| valyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 1052

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 15/174 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILH-KGEKISKSLG 308
           F+P    +  +DI+      W A ++ A L     +P ++VF H  IL   GE++SKS G
Sbjct: 587 FYPTSTLITSRDIITL----WVARMVLAGLNNMGEIPFREVFIHPTILDGTGERMSKSKG 642

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP++VIE+ G D+LR+ L       +D             A +     N +  +++ 
Sbjct: 643 NGVDPLDVIEKFGADSLRFGLAYLTTETQDVRMPVQFECPHCEALIDQTKKNRMQHTIT- 701

Query: 369 ILKDYDGMIPTPGAFTESDESIL--SVCSRVLQEIRENMQNQLIHRALAQVISL 420
             K   G+  T  A +E+D+++   SV S    EI  N  N+L + A   +I+L
Sbjct: 702 -CKKCSGVFSTQWAQSEADQALPRGSVVSERF-EIGRNFCNKLWNAARFTMINL 753



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA    + DVL R+ R+ G + L+  GTD           +AG+ T+  V++
Sbjct: 59  HLGHALNNTLQDVLIRYKRMKGFEALWVPGTD-----------HAGIATQAVVER 102


>gi|315125730|ref|YP_004067733.1| valine tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014244|gb|ADT67582.1| valine tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 950

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 119/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N D  K  F P+D+ V G DI+ F    W A ++   L  
Sbjct: 469 VLDTWFSSALWTFSTQGWPENTDDLKT-FHPSDVLVTGFDIIFF----WVARMIMMTLHF 523

Query: 285 --------PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGV------------ 322
                    +P K V+  G I    G+K+SKS GNV+DP+++I+ +G+            
Sbjct: 524 IKDENGKSQVPFKTVYVTGLIRDDNGDKMSKSKGNVLDPLDMIDGIGLEDLVQKRTGNMM 583

Query: 323 -------------------------DALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                    DALR+ L    + G+D  +D + L+   N    N 
Sbjct: 584 QPKLAAKIEKDTRKVFANGIEAHGTDALRFTLAAMASTGRDINWDMNRLEGYRN--FCNK 641

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  ++ D G   +   ++ +D  IL      ++   E++ N     A   
Sbjct: 642 LWN-ASRYVLMNTEEQDCGFNDSEKQYSLADRWILGQYEATVKTYTEHLDNYRFDLAANT 700

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  L K N  +     +  + V+  L  L+   +P +   I+
Sbjct: 701 LYEFTWNQFCDWYLELTKP-VLFKGNEAQQRGTRHTLITVLESLLRLMHPMMPYITETIW 759



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA++  I D L RF R+ G + L+  GTD           +AG+
Sbjct: 34 SIMIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTD-----------HAGI 82

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 83 ATQMLVER 90


>gi|265763886|ref|ZP_06092454.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263256494|gb|EEZ27840.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 1141

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 639 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLGNA 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 698 VDPFSTIEQYGSDPLRWYMITNSSPWDNLKFDVDGIEE 735


>gi|183508707|ref|ZP_02958193.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|182675629|gb|EDT87534.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGADTLRIY 606


>gi|120437357|ref|YP_863043.1| leucyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|166231610|sp|A0M5T1|SYL_GRAFK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117579507|emb|CAL67976.1| leucyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 962

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ A  H+GH    I +D+ ARF R  G +VL   G D  G    + 
Sbjct: 29  EKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARFKRHKGFNVLHPQGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTE 99
           A   G    V  + N   +R+  D +  S+D    +RT+E
Sbjct: 89  AIQTGQHPAVTTENNIARYREQLDKIGFSFDWSREVRTSE 128


>gi|20094800|ref|NP_614647.1| leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|32171571|sp|Q8TVM4|SYL_METKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19888009|gb|AAM02577.1| Leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 943

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE +YI+ A  YP+   H+GHA   ++ D+ ARF R+ G +VLF       G  +   A
Sbjct: 25  DRESVYITVAYPYPSGSMHVGHARTYLVPDIYARFKRMQGYNVLFPMAFHVTGTPVVGIA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF 94
           +      K   +   R +RD+  V +   + F
Sbjct: 85  ER----IKEGDEDTIRLYRDLYGVPEEELEKF 112



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P +  +  KD++  H  ++  F  +A  P    PK +   G  L +G+K+S S GNV+
Sbjct: 574 WYPLNWRLSAKDLVTNHLTFF-IFHHAALFPEDKWPKGIVVFGMGLLEGQKMSSSKGNVV 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              E ++E G D +R FL    A   + + D D   + V      G+   + R  ++I  
Sbjct: 633 LLSEALDEYGPDVVRLFL----ATSAEPWQDFDWRDEYV-----RGVQRHLERFETLIRD 683

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
             D  +    A    D   L     V++E  E ++   I RA  +    V ++ R ++A 
Sbjct: 684 HADESVEDKDAV---DRWFLHEFREVVEETTEALEGFQIRRAYNRAFYGVMKLLREYEAM 740

Query: 432 K 432
           K
Sbjct: 741 K 741


>gi|332181263|gb|AEE16951.1| Isoleucyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 1065

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 17/223 (7%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVID 312
           PAD    G D  R    ++   +L+A L   P  K    +G +L   G+K+SKSL N  D
Sbjct: 568 PADFISEGLDQTR--GWFYSLTVLAAALFDRPAFKNCVVNGLVLASDGKKMSKSLRNYTD 625

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           P   +   G DA+R FL+       D   Y  +G++  + + L   I    S S  +   
Sbjct: 626 PAVAVNTFGADAIRLFLMHSAVVKADDLKYSDEGVRDVLKSIL---IPLWNSYSFYITYA 682

Query: 372 DYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           + DG+  T  AF         D  +LS+  +++ ++   +    + RA+  ++S + +++
Sbjct: 683 NIDGIQATGHAFDSVSPTNPLDRWLLSITQKLVTDVSGALDAYDLSRAIDPIVSYIDQLN 742

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVP 467
            ++  +      K+  D   T  Y T+ + ++  +++    VP
Sbjct: 743 NWYIRRSRRRFWKSENDGDKTEAYETLYLALKTFSLVAAPVVP 785


>gi|327399319|ref|YP_004340188.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181948|gb|AEA34129.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 814

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 30/236 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKG 300
           D  +A +W   D +V G +    H +Y   F      L  AN   P K++ + G ++  G
Sbjct: 516 DKQRADYWMDVDQYVGGIEHAVMHLLYARYFTKVLRDLGYANSTEPFKRLLTQGMVIKDG 575

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP ++I + G D  R F++      KD  +  +G++         G   
Sbjct: 576 AKMSKSKGNVVDPDDIINQYGADTARLFILFAAPPEKDLEWSDEGVE---------GAYR 626

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   ++ +  D  +      T+  + +  +    +++I ++ +N   + A+A  +  
Sbjct: 627 FLNRVWRLVYEYKDLKVIDIDINTDRLKELNYMIHSTIKKITQDFENYHFNTAIAASMEF 686

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ +  +    KP    KT  + A     +  + I  L I+L   VP +A +++ +
Sbjct: 687 VNFLYDF----KP----KTEDENA-----LFAKAIEVLLIMLNPIVPHIAEELWQL 729



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+ + H+GH     I D +AR+    G +VL   G D  G     AA
Sbjct: 30  KKPKFYQLEMFPYPSGRIHMGHVRNYSIGDAIARYKFAQGYNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N          L  SY  D  + T ++ ++   + ++ ++  KG +Y
Sbjct: 90  INNKTHPAKWTYSNIDYMIKELKRLGFSYDWDRLVITCDENYYKWEQKIFIEMLKKGMVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  Y    +    +++V    DG+ +      +Q  E + +F +++ Y D+LL   
Sbjct: 150 RAKSTVNYCPTCKTVLANEQV---EDGKCWRCGDEVIQ-KEMDEWFLKITDYADQLLDDM 205

Query: 181 E----SHPEFILPIERRN 194
           E      PE +L I+++N
Sbjct: 206 ELIKDGWPEKVL-IQQKN 222


>gi|325474930|gb|EGC78116.1| leucyl-tRNA synthetase [Treponema denticola F0402]
          Length = 858

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 19/182 (10%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++LYI     YP+    H+GH       D+ +RF R+ G +VL   G D  G      A 
Sbjct: 34  KRLYILDMFPYPSGDGLHVGHPEGYTATDIYSRFLRMSGYNVLHPMGFDSFGLPAENYAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   +   +N   FR     + +SY  D  I T+E+ ++   + ++ ++  KG  Y+
Sbjct: 94  KTGIHPLITTRKNMETFRKQIKSIGLSYDWDREISTSEESYYKWTQWIFLQLFKKGLAYE 153

Query: 122 G------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                  C S    L +E   +      GA  Q  N +    QW+       +++ Y ++
Sbjct: 154 KEAPINWCPSCLTGLANEEVKDGKCERCGAQIQRKNLR----QWI------LKITEYAER 203

Query: 176 LL 177
           LL
Sbjct: 204 LL 205



 Score = 36.6 bits (83), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NVI+P ++I+E G D LR +         + F     + K  N     G+   
Sbjct: 629 KMSKSLKNVINPDDIIKEYGADTLRLY---------EMFLGPLEVSKPWNTSGIMGVFRF 679

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + +  ++  ++     P     T   +++  + ++ ++++ E+  +   + A++Q++  +
Sbjct: 680 LEKIWNLSDREI-YKTPVNDTSTPETKTLTVLLNKTIKKVTEDTASLNFNTAISQMMIFI 738

Query: 422 SEVDRY 427
           +EV ++
Sbjct: 739 NEVSKH 744


>gi|313673045|ref|YP_004051156.1| isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939801|gb|ADR18993.1| Isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 931

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       D    S      A++++ G D  R  FH+    +       
Sbjct: 538 ILDVWFDSGVSHAAVCEVRDELKPS------ANMYLEGSDQHRGWFHSSLLESVGTRGVA 591

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K+V +HGF++  KG K+SKSLGNV+ P E+IE+ G + LR ++  E
Sbjct: 592 PY-KEVLTHGFVVDGKGRKMSKSLGNVVKPQEIIEKYGAEILRLWVAAE 639


>gi|312141987|ref|YP_004009323.1| leucyl-tRNA synthetase [Rhodococcus equi 103S]
 gi|311891326|emb|CBH50647.1| leucyl-tRNA synthetase [Rhodococcus equi 103S]
          Length = 950

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR+HR+ G +VL T G D  G    + A 
Sbjct: 62  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYHRMQGRNVLHTLGYDAFGLPAEQYAV 121

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N  N +     L + +D+
Sbjct: 122 QTGTHPRTTTEANIANMQRQLRRLGLGHDE 151


>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|169334959|ref|ZP_02862152.1| hypothetical protein ANASTE_01365 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257697|gb|EDS71663.1| hypothetical protein ANASTE_01365 [Anaerofustis stercorihominis DSM
           17244]
          Length = 1032

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 125/261 (47%), Gaps = 20/261 (7%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           ++  W D+ +       Y  +N +  + +F PA+    G D  R  F+++   +  +   
Sbjct: 513 VIDCWFDSGSMPFAQQHYPFENKEEFEEQF-PANFICEGIDQTRGWFYSLLAISTFIMKK 571

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  +  IL   G+K+SKS GN +DP ++ ++ G DALR++L+          +D
Sbjct: 572 APY-KSVLVNDLILDANGQKMSKSKGNTVDPFDLFDKYGADALRWYLLYVSPAWTPTKFD 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDES---ILSVCSRV 397
           ++GLK+ V +   N + N+ +  V  +  + D + P      + + DE    ILS  + +
Sbjct: 631 EEGLKE-VISKFFNTLKNVYTFFV--MYANTDNVDPREFFVEYKDRDEIDLWILSKYNNL 687

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRASTVLYVTVE 453
           ++ +  +M+     +A+ ++   V+E +  ++     ++ W  +  N  +A  V   T E
Sbjct: 688 VKAVTADMEINEHTKAVKKIQDFVNEDLSNWYIRRCRRRFWASELDNDKKA--VYNTTYE 745

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+  L  L+  F P ++ +IF
Sbjct: 746 VLIGLCKLIAPFAPFISEEIF 766


>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|254782363|sp|B7IUQ5|SYI_BACC2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|75911132|ref|YP_325428.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731296|sp|Q3M3A3|SYL_ANAVT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|75704857|gb|ABA24533.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 872

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + GV    +  QN    R     L +S D
Sbjct: 92  DRGVPPANWTYQNITQMRQQLQRLGLSID 120



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +VI + GVD  R F++ +    KD  +D+  ++ +      N +  LV
Sbjct: 635 MSKSKGNGVAPEDVIAKYGVDTARMFILFKAPPEKDLEWDEADVEGQFR--FLNRVWRLV 692

Query: 363 SRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  V+       G+ P    G  ++S++ +       +Q + E+++++       Q  + 
Sbjct: 693 TDYVA------SGVNPKNKSGELSKSEKDLRRAIHSAIQSVTEDLEDEY------QFNTA 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +SE+ +  +A        T+ +   + +Y   E I  L +LL  F P +A +++ +L
Sbjct: 741 ISELMKLSNAL-------TDANGKDSRVY--AEGIHTLVVLLAPFAPHIAEELWQLL 788


>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433828|sp|Q819R4|SYI1_BACCR RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782365|sp|B7H6N1|SYI_BACC4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
 gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|23098939|ref|NP_692405.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746457|sp|Q8ER41|SYI1_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|22777167|dbj|BAC13440.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 918

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L N    +    PA++++ G D  R  F++    +  ++   
Sbjct: 523 IMDVWFDSGSSH---EGVLLNRQNHQR---PANVYLEGSDQYRGWFNSSLSTSVAVTGKA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V SHGF+L   G K+SKSLGNVI P +V +++G D LR ++
Sbjct: 577 PY-KAVISHGFVLDGNGRKMSKSLGNVIVPSKVQKQLGSDILRLWV 621


>gi|115352610|ref|YP_774449.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322419|sp|Q0BCK8|SYI_BURCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115282598|gb|ABI88115.1| Isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDFAQHAVPV-DEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY +T 
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTH 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A K+F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|269986190|gb|EEZ92502.1| aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
          acidiphilum ARMAN-4]
          Length = 907

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          +++EK +I+  + YP+ + H GH Y    AD+ ARF R+ G +VLF  G    G  +A
Sbjct: 29 EKKEKFFITVPVMYPDGRLHTGHMYTWTRADIFARFQRMMGKNVLFPQGFHMTGGPMA 86



 Score = 37.0 bits (84), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)

Query: 244 YLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHG 294
           + DN +  K +F   +P DL V  K+++  H     AF +  ++ +      P+ +  +G
Sbjct: 545 FPDNIERMKKEFEYWYPLDLRVTAKELITNHI----AFFIMTHIAIFNKDKWPRGLGING 600

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++   G+K+SKS GN +    V+   G DA R      IA   +G  D
Sbjct: 601 WLTVNGKKMSKSKGNTMTIDYVVNNYGADAARL-----IASASNGMDD 643


>gi|254293350|ref|YP_003059373.1| isoleucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041881|gb|ACT58676.1| isoleucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 989

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T +  T          +   WPADL++ G D  R  F +    +       
Sbjct: 589 ILDVWFDSGTTHAFTLE-------KRGLKWPADLYLEGSDQHRGWFQSSLLESCATRGRA 641

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + V +HGF++ + G K+SKSLGN I+P EV ++ G + +R ++
Sbjct: 642 PY-EGVLTHGFVVAQDGRKMSKSLGNGIEPDEVCKQFGAEIMRIWV 686



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R +  I     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 55  KGRPEFMIHDGPPYANGHLHIGHAMNKILKDLVVRTKQMSGFDADYIPGWDCHGLPI 111


>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 921

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|269861263|ref|XP_002650344.1| isoleucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511598|sp|B7XK16|SYIC_ENTBH RecName: Full=Probable isoleucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|220066227|gb|EED43719.1| isoleucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 953

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 29/251 (11%)

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---NLPLPK 288
           ID L N      YL      K  F PAD   IG+ + +    ++   ++S    N P  K
Sbjct: 568 IDKLDNINLNNAYL-----IKENF-PADF--IGEGLDQTRGWFYTLHVISTILFNSPAFK 619

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGL 346
            V  +G +L + G+K+SK L N  DP+ +  + G DALR +L+       +   ++++G+
Sbjct: 620 NVIVNGIVLAEDGKKMSKRLKNYPDPMNIFNKYGADALRMYLISSPVVEAENLRFNENGV 679

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           K+ +   L      LV      I      ++    A+ ES+ +IL   ++V  ++ E   
Sbjct: 680 KEILKTLLIPWYNTLVFYKECQIQNHNHTLL--LDAWIESELNIL--INKVNIDMSEYKL 735

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           N +++ AL            + +    W ++    +  +  LY+   +I++ +I++ AFV
Sbjct: 736 NNILNYALD-----------FIENLNNWYIRINRKELKNNGLYLKT-IIKRFSIVMSAFV 783

Query: 467 PKLANKIFDIL 477
           P  ++  + I+
Sbjct: 784 PFFSDYSYQIV 794


>gi|195327961|ref|XP_002030685.1| GM25585 [Drosophila sechellia]
 gi|194119628|gb|EDW41671.1| GM25585 [Drosophila sechellia]
          Length = 796

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 23/131 (17%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
           L++L    K  D G  I D       +W D+ + +    G        K K   ADL++ 
Sbjct: 434 LRELHHEAKDLDKGTDILD-------IWFDSGSTWSAVLG--------KDKI--ADLYLE 476

Query: 264 GKDILRFHAIYWPAFLLS--ANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
           G D  +F   +  + L+S  A    P K +F HGF +  KG K+SKSLGNVI P ++ ++
Sbjct: 477 GYD--QFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKK 534

Query: 320 VGVDALRYFLV 330
            G DALR+++ 
Sbjct: 535 YGSDALRWWVA 545



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N Q H+GHA   I+ D+  R     G  V +  G D HG  I  KA   A   +   +
Sbjct: 82  YANGQLHMGHAVNKILKDITLRQRVAHGQQVNYIPGWDCHGLPIELKATSTAPGQSAQEI 141

Query: 74  DQNSRNF 80
            Q SR F
Sbjct: 142 RQKSRAF 148


>gi|110668247|ref|YP_658058.1| leucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109625994|emb|CAJ52439.1| leucine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 907

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 16/146 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--LLSANLPLP-----KKVFSHGFILHKGEKISKS 306
           ++ P D +V G +    H +Y   F  +L+ N  L      + + + G +   GEK+SKS
Sbjct: 518 QWMPVDQYVGGIEHAVMHLLYSRFFTKVLAENDDLAVTEPFENLLAQGMVQLDGEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN-----ADLANGIGNL 361
            GN + P  ++EE G D  R F+++     +D  + ++G++          +LA+ I ++
Sbjct: 578 KGNTVSPQRIVEEYGADTARLFMMQAAQPERDFDWSEEGVRSTNQLLTQLIELADVIADI 637

Query: 362 -VSRSVSMILKDYDGMIPTPGAFTES 386
            V R+V   L+++D +   P + TE+
Sbjct: 638 NVDRAV---LENHDAVTQPPISNTET 660



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 35/85 (41%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ R+ G DVL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMRGDDVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD 92
             + +        R+  + +   YD
Sbjct: 96  NPRDWTYDCIETMREQMESMGFGYD 120


>gi|87124459|ref|ZP_01080308.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168031|gb|EAQ69289.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 876

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 27/191 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 47  QKAFYALSMFPYPSGTLHMGHVRNYVITDVIARAQRMRGDAVLHPMGWDAFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV    + D+N    +   + L +S  D+ R     H D  R  W +      ++   
Sbjct: 107 ERGVNPADWTDRNIAQMKAQLNRLGLSI-DWEREQATCHDDYYR--WTQW-----LFLEL 158

Query: 124 YSGWYSLRDEAYYNDDEVYKG--------ADGQYYNA-----QHNPVQWMEEEGYFFRLS 170
           ++G  + + EA  N D + +          DG+ + +     Q    QW      F R++
Sbjct: 159 HAGGLAYQKEATVNWDPIDQTVLANEQVDGDGRSWRSGALVEQRKLRQW------FLRIT 212

Query: 171 AYQDKLLSYYE 181
            Y D LL   E
Sbjct: 213 DYADALLDDLE 223


>gi|328882446|emb|CCA55685.1| Valyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 875

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 12/184 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRF---HAIYWPAF 278
           DP  ++  W  +     +T G+ +  PD   AKF+  D+ + G DI+ F     + +  +
Sbjct: 452 DPD-VLDTWFSSGLWPFSTLGWPEKTPD--LAKFYSTDVLLTGHDIIFFWVARMMMFGLY 508

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +   +P  K V   G +  + G+K+SKS  N +DP++ ++  G DA+R+ L +    G 
Sbjct: 509 AMDGEVPF-KTVALTGLVRDEFGKKMSKSNPNAVDPLDWMDAYGSDAVRFTLAKGANPGA 567

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D    +D ++   N   AN I N  +R   M     +G +P     + +D  ILS  +  
Sbjct: 568 DVPIGEDWVQASRN--FANKIWN-ATRFAMMNGATIEGPLPDASEMSATDRWILSRLNET 624

Query: 398 LQEI 401
           + ++
Sbjct: 625 VAQV 628


>gi|326793616|ref|YP_004311436.1| isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326544380|gb|ADZ89600.1| Isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 940

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 34/242 (14%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +        D  +   +PADL++ G D  R  F +    +  +    P  
Sbjct: 536 VWFDSGVTHYSVV------DQREELSFPADLYLEGSDQHRGWFQSSLKTSIAIRGEAPY- 588

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF +   G K+SKSLGNV+ P +V+  +G D +R ++      G+    D+  +
Sbjct: 589 KQVLTHGFTVDGDGRKMSKSLGNVVSPQKVMSTLGADIIRLWVAATDYTGEMTVSDE--I 646

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES------ILSVCSRVLQE 400
            KRV AD    I N    +   +L + +G  P      ESD+       I+   +++ +E
Sbjct: 647 LKRV-ADSYRRIRN----TARFMLANLNGFDPAKD-MVESDQMIALDRWIVDRAAQLQKE 700

Query: 401 IRENMQNQLIHRALAQVISLVSEVDR---YFDAQKPWELKKTNPD-----RASTVLYVTV 452
           I E       H  + Q I     VD    Y D  K  +   T PD      A T LY  V
Sbjct: 701 IEEAYNEYQFH-TVNQKIQNFCSVDLGGFYLDVIKDRQY-TTQPDSLARRSAQTALYHIV 758

Query: 453 EV 454
           E 
Sbjct: 759 EA 760



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R+   +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 46  KGRKPFILHDGPPYANGSIHIGHAVNKILKDIIVKSKTVSGYDAPYIPGWDCHGLPI 102


>gi|298481493|ref|ZP_06999685.1| valine--tRNA ligase [Bacteroides sp. D22]
 gi|298272357|gb|EFI13926.1| valine--tRNA ligase [Bacteroides sp. D22]
          Length = 878

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   + K++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|149194837|ref|ZP_01871931.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134996|gb|EDM23478.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 819

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKKGFNVLHPIGWDSFGMPAENAAIKH 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY 91
           GV  K +  +N    R   + L +S+
Sbjct: 93  GVHPKKWTYENIDYMRKELNRLGLSF 118



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISKSL 307
           F P D ++ G +    H +Y   F      L   NL  P  K+ + G +L  G K+SKS 
Sbjct: 533 FAPVDQYIGGIEHAILHLLYARFFTKALRDLGYVNLDEPFAKLLTQGMVLKDGAKMSKSK 592

Query: 308 GNVIDPIEVIEEVGVDALRYFLV 330
           GNV+DP E++E+ G D  R F++
Sbjct: 593 GNVVDPDEIVEKYGADTARLFIL 615


>gi|77359865|ref|YP_339440.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|84029560|sp|Q3IEA2|SYI_PSEHT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76874776|emb|CAI85997.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 942

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q  + VW D+  ++       ++  G      PADL++ G D  R  F +    +  ++ 
Sbjct: 535 QDTLDVWFDSGVSHACVVDAREDLTG------PADLYLEGSDQHRGWFMSSMMTSVAING 588

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + P  ++V +HGF +   G K+SKSLGNVI P  V+ ++G D LR ++ 
Sbjct: 589 HAPY-RQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVA 636


>gi|301623378|ref|XP_002940996.1| PREDICTED: valyl-tRNA synthetase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 832

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 133/340 (39%), Gaps = 63/340 (18%)

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           L R   D  +K  +D   ++  W  +        G+ +N    K  F+P  L   G D+L
Sbjct: 352 LRRPEKDLSVKRDED---VLDTWFSSALFPFAMLGWPENTSDLK-DFYPNSLLETGSDLL 407

Query: 269 RFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321
            F    W A +      L+  LP  K+VF H  +    G K+SKSLGNVIDP++VI  + 
Sbjct: 408 FF----WVARMVMLGEHLTGKLPF-KEVFLHSMVRDAHGRKMSKSLGNVIDPLDVITGIS 462

Query: 322 VDALRYFL------VREIA----------------CGKDGF--------YDKDGLKKRVN 351
           ++ L+  L       RE+                 CG D             D +   V 
Sbjct: 463 LEELQNRLQDGNLDPRELKVAEAGLLKAFPRGIPECGTDALRFALCSYKVQGDDINLDVP 522

Query: 352 ADLA-----NGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIREN 404
           + LA     N I N +  ++S + + +   IP      +   D  +L     + +E    
Sbjct: 523 SVLAVRHFCNKIWNGIKFTLSSLGESFSP-IPVEEFKPQGPMDRWLLDHLRLLTEECERR 581

Query: 405 MQNQLIHRALA--QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            Q   +H A    Q   + S  D Y +A KP  LK  +   A   LY   E++ +   LL
Sbjct: 582 FQAYELHGATGAIQTFWVQSYCDFYVEAVKP-ILKGPHGSDAQQTLYWGAEIVLR---LL 637

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL--DQRLKPGFMLH 500
             F P L  +++  L  A  N C  S+   Q   P  M H
Sbjct: 638 APFTPFLCEELWQRLPSASVN-CAPSICVAQYPTPSQMAH 676


>gi|325677352|ref|ZP_08157017.1| leucine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325551815|gb|EGD21512.1| leucine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 950

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR+HR+ G +VL T G D  G    + A 
Sbjct: 62  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYHRMQGRNVLHTLGYDAFGLPAEQYAV 121

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N  N +     L + +D+
Sbjct: 122 QTGTHPRTTTEANIANMQRQLRRLGLGHDE 151


>gi|295085807|emb|CBK67330.1| leucyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 944

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|257081256|ref|ZP_05575617.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989286|gb|EEU76588.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 933

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|258543599|ref|YP_003189032.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634677|dbj|BAI00653.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637733|dbj|BAI03702.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640787|dbj|BAI06749.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643842|dbj|BAI09797.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646897|dbj|BAI12845.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649950|dbj|BAI15891.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652940|dbj|BAI18874.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655994|dbj|BAI21921.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 872

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 79/191 (41%), Gaps = 17/191 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K+  +    + + EK+SKS  N + P+ +IE  G D  R+F++ +    +D  + + G+ 
Sbjct: 614 KRGTTEPVTVGRVEKMSKSKRNTVAPVAIIERFGADTARWFVLSDSPPERDMEWTEAGVA 673

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                  A      + R++  + +D       P       +++     R +  + E ++ 
Sbjct: 674 G------AARFSQRLFRTIRTVAQDVPATTECPTDIDRQADTLRRTTHRTIAAVTEALEG 727

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I+ A+A++  L S +          E   T P  A    +   E  + L +L    +P
Sbjct: 728 FAINVAVARIHELTSALAEA-------EKSATVPGMA----FARREAAQTLCLLCAPMMP 776

Query: 468 KLANKIFDILF 478
            LA ++F ++ 
Sbjct: 777 HLAEEMFALVL 787



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA+
Sbjct: 40  KPKYYVLEMFPYPSGQLHMGHVRNYALGDVIARYKRARGFSVLHPMGWDAFGLPAENAAR 99

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV  K +   N    R     L  S +
Sbjct: 100 ERGVHPKEWTLNNIATMRGTLQRLGFSLN 128


>gi|237716997|ref|ZP_04547478.1| leucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262405765|ref|ZP_06082315.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644879|ref|ZP_06722617.1| leucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808233|ref|ZP_06766996.1| leucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442980|gb|EEO48771.1| leucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262356640|gb|EEZ05730.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292639773|gb|EFF58053.1| leucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444560|gb|EFG13264.1| leucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 944

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 962

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 587 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 645

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 646 KKIMDQLGGDILRLWV 661



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 99  YANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 155

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W +                   ++ 
Sbjct: 156 MTVAEFRKLC--AEYAYEQVNRQREQFKRLGVRADWDRPYITLEPAYEAQQIKVFGEMAK 213

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 214 KGYIYKGQKPVYWSPTSESALAEAEI 239


>gi|255530334|ref|YP_003090706.1| isoleucyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343318|gb|ACU02644.1| isoleucyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 1129

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 9/174 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD    G D  R  F+ ++    L+   +   K V S+G +L K G+K+SK LGN  DP
Sbjct: 632 PADFIAEGVDQTRGWFYTLHAIGALVFDKVAY-KNVVSNGLVLDKNGQKMSKRLGNAADP 690

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNL-VSRSVSMI 369
            + +EE G DA R++++       +  +D +G   ++++    L N      +  ++   
Sbjct: 691 FKTLEEYGPDATRWYMISNANPWDNLKFDIEGIAEIRRKFFGTLYNTYAFFALYANIDKF 750

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             D D + P     +E D  ILS+   ++ E+ E+  +    +A   + + V E
Sbjct: 751 EIDQDNLTPV-AERSELDRWILSLLQTLIAEVDESYNSYEPTKATRAIQAFVDE 803


>gi|188524541|ref|ZP_03004531.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273657|ref|ZP_03206192.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195659580|gb|EDX52960.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198249685|gb|EDY74466.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGSDTLRIY 606


>gi|160884845|ref|ZP_02065848.1| hypothetical protein BACOVA_02835 [Bacteroides ovatus ATCC 8483]
 gi|156109880|gb|EDO11625.1| hypothetical protein BACOVA_02835 [Bacteroides ovatus ATCC 8483]
          Length = 944

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|119713210|gb|ABL97278.1| leucyl-tRNA synthetase [uncultured marine bacterium EB0_50A10]
          Length = 500

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
            K+W P DL++ G +    H +Y   F        ++  N P  KK+ + G +L  G K+
Sbjct: 201 TKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDMDMVEGNEPF-KKLLTQGMVLKDGAKM 259

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330
           SKS GN +DP   IE+ G D +R +++
Sbjct: 260 SKSKGNTVDPQSYIEKYGADTVRLYMM 286


>gi|33151511|ref|NP_872864.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423872|sp|Q7VP34|SYI_HAEDU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33147731|gb|AAP95253.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 935

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 29/214 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G  A     D+++ G D  R   +     
Sbjct: 524 KVPD----TLDVWFDSGSTYASVVEQRPEFNGQTA-----DMYLEGSDQHRGWFMSSLML 574

Query: 279 LLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             + N   P ++V +HGF++  KG K+SKS+GNVI P EV  + G D LR ++       
Sbjct: 575 ASATNGKAPYQQVLTHGFVVDEKGRKMSKSIGNVIVPSEVWNKNGADILRLWVASTDYTA 634

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIPT-----PGAFTESDE 388
                     + +V+  + N  G+   R   +   +L + +G IP      P      D 
Sbjct: 635 ----------EMKVSHGILNSAGDAYRRIRNTARFLLSNLNGFIPARDEVKPNEMIALDR 684

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +S       +I E  ++   H  + +++   S
Sbjct: 685 WAVSCALEAQNDIIEAYEHYQFHTVVQRLMRFCS 718


>gi|87125070|ref|ZP_01080917.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86167390|gb|EAQ68650.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 969

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       D         +PADL++ G D  R  F +    +  ++ + P
Sbjct: 555 MDVWFDSGSSWAAVASQRDG------LSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             + V +HGF L  KG K+SKSLGNV+DP+ +IE           G D LR ++
Sbjct: 609 Y-RTVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRLWV 661


>gi|297160552|gb|ADI10264.1| leucyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 957

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K ++     YP+ A  H+GH    I  DV AR+HR+ G +VL T G D  G    + A
Sbjct: 55  RPKKFVMDMFPYPSGAGLHVGHPLGYIATDVYARYHRMTGHNVLHTLGFDAFGLPAEQYA 114

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N R     L + +D
Sbjct: 115 VQTGTHPRVSTEANIENMRRQLRRLGLGHD 144



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 28/191 (14%)

Query: 253 AKFWPADLHVIG--KDILRFHAIYWPAFLL------SANLPLPKKVFSH--GFILHKGEK 302
           A+FW   L+ +G       FH +Y    +       S  + +P        G   ++GEK
Sbjct: 663 ARFWSKVLYDLGHISSAEPFHKLYNQGMIQAYVYRDSRGIAVPAAEVEERDGAYYYQGEK 722

Query: 303 IS-------KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++       KSL N + P E+  E G D LR +   E+A G         + +  +    
Sbjct: 723 VTRLLGKMGKSLKNAVTPDEICAEYGADTLRLY---EMAMG------PLDVSRPWDTRAV 773

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            G   L+ R     + +  G +    A  E DE+ L    + +  +R++M N   + A+A
Sbjct: 774 VGQYRLLQRLWRNAVDEASGEVTVVDA--EPDEATLRALHKAIDGVRQDMVNLRFNTAIA 831

Query: 416 QVISLVSEVDR 426
           ++  L + V +
Sbjct: 832 KITELNNHVTK 842


>gi|261403615|ref|YP_003247839.1| isoleucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370608|gb|ACX73357.1| isoleucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 1039

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           KK   HGF L  KG+K+SKSLGN+++P +V+E+ G D LR++L+      +D  +    +
Sbjct: 586 KKCLMHGFTLDEKGDKMSKSLGNIVNPDDVVEKYGADLLRFYLLSANKVWEDLRFVWSEM 645

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              ++  L N + N    +V+ M+L D+           + D+ ILS  + V +   EN+
Sbjct: 646 DDVLS--LFNTLWNAYMFAVNYMVLDDFKPDEKYFKYLKDEDKWILSRINSVAKIAVENL 703

Query: 406 QNQLIHRALAQVISLV-SEVDRYF---DAQKPWELKKTNPDR--ASTVLYVTVEVIRQLA 459
           +    H     +   + +++ R++      + W+ +K + D+  A   LY    V+ +LA
Sbjct: 704 EVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWK-EKEDVDKLAAYQTLYY---VLLKLA 759

Query: 460 ILLQAFVPKLANKIFDILFVAD 481
            +L    P  A  ++  L   D
Sbjct: 760 TILAPVSPHTAEAMYQNLKTED 781



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I    +N
Sbjct: 37  KEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  -------AGVTTKVFVDQNSRNFRDMA 84
                    + TK+ VD+     ++ A
Sbjct: 97  EFGIKNKKEIETKIGVDKFIEKCKEFA 123


>gi|253828110|ref|ZP_04870995.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511516|gb|EES90175.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 927

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +          +  ++  +PA L++ G D  R  FH+    +  ++  
Sbjct: 540 HILDVWFDSGSTWKAVL----QSNLYRSGGYPASLYLEGSDQHRGWFHSSLLVSCAVNEK 595

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K + +HGF +  KGEK+SKS GNV+ P EV++E G + LR ++ 
Sbjct: 596 APY-KAIVTHGFTMDEKGEKMSKSKGNVVVPKEVLKEFGSEILRLWVA 642



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E   +     Y N   HIGHA   I+ D++ ++H   G  + +T G D HG  I +  +
Sbjct: 48  KESFNLHDGPPYANGHLHIGHALNKILKDIINKYHYFQGKKIFYTPGWDCHGLPIEQQVE 107


>gi|219871117|ref|YP_002475492.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782407|sp|B8F5E2|SYI_HAEPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219691321|gb|ACL32544.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 938

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVQQRPEFNGNSA-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N     +V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G+   R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGDTYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|185178964|ref|ZP_02964721.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024264|ref|ZP_02996960.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518576|ref|ZP_03004032.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|225551627|ref|ZP_03772573.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209243|gb|EDU06286.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018928|gb|EDU56968.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997837|gb|EDU66934.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|225379442|gb|EEH01807.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGSDTLRIY 606


>gi|171920926|ref|ZP_02932075.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|225550463|ref|ZP_03771412.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903154|gb|EDT49443.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|225379617|gb|EEH01979.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGADTLRIY 606


>gi|15616769|ref|NP_239981.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134943|sp|P57249|SYI_BUCAI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25293003|pir||C84947 isoleucine-tRNA ligase (EC 6.1.1.5) [imported] - Buchnera sp.
           (strain APS)
 gi|10038832|dbj|BAB12867.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 35/285 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW ++  N  TT  Y  N + +K     AD+ + G D  R  F +    + L+S   
Sbjct: 532 ILDVWFES-GNTHTTINY-KNKNYTKKN---ADMFLEGSDQHRGWFMSSLIISTLISEKK 586

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + V +HGF++  KG+K+SKS+GN I P E+++ +G D LR ++        D     
Sbjct: 587 PYSE-VLTHGFVVDGKGQKMSKSIGNTISPNEIVDTLGADILRLWVASS-NYSNDISISN 644

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEI 401
           + LK   ++D+   I N  +R +   + D+D    I +       D+  +     V +EI
Sbjct: 645 EILKS--SSDIYRRIRN-TARFMLANISDFDPKKNIISKENMVLLDKWAIGQTKIVQEEI 701

Query: 402 RENMQNQLIHRALAQVISLVS-EVDRYF---DAQKPWELKKTNPDRAST---VLYVTVEV 454
            ++  N   H  + +++   S E+  ++      + + LKK + +R S+   + Y+   +
Sbjct: 702 IQHYNNYNFHAVIQRLMYFCSIEMGSFYLDIIKDRQYTLKKHSQERRSSQTAIYYIINSL 761

Query: 455 IRQLAILLQ-------AFVPK------LANKIFDILFVADENRCF 486
           +R +A +L        +++P+         + FD LF  D++  F
Sbjct: 762 VRWIAPILSFTADEIWSYLPENNSQYVFMEEWFDKLFYLDQDDLF 806



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           +E++  ++     Y N   HIGHA   I+ D++ +   + G D  +    D HG    QK
Sbjct: 46  QEKKIFFLHDGPPYANGNIHIGHAVNKILKDIIIKSKNMSGFDAPYIPSWDCHGLPIEQK 105

Query: 58  I-AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +  K   N G  +     +  R +    D ++    DFIR
Sbjct: 106 VEEKIKSNQGEISTTEFQEKCRKY--AQDQVEKQKKDFIR 143


>gi|320100559|ref|YP_004176151.1| Isoleucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752911|gb|ADV64669.1| Isoleucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 1062

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 25/272 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +  VW+D+   +    G+   PD    +    D  V G D  R  F ++   
Sbjct: 523 RVPD----VADVWLDSGVAFYAAKGH---PDELSPEDVILDFIVEGHDQTRGWFFSLL-R 574

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A +L  N    + V  HGF+L  KG ++ KSLGN +   E I  VG D LR +L+     
Sbjct: 575 AGVLGFNRSPYRTVLVHGFMLDEKGREMHKSLGNYVGTDEAISRVGRDPLRLWLLGNTTW 634

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESIL 391
            +D  +    L++ V  DL+      V     M L  YD    T     G     D+ IL
Sbjct: 635 -EDARFSWKSLEEAVR-DLSVLWSIAVFAYTYMRLDKYDPAGHTIRDVSGHLRVEDKWIL 692

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRAS-T 446
           S  + +++++ E M++  ++ A+  +     E     Y    +P  W  + T    A+ T
Sbjct: 693 SRVNTLIKQVSELMESYQVYEAVRLLREFFVEDLSHWYIRLIRPRVWVEENTGDKLAAYT 752

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VLY    VI ++A L+  F P +A  ++  L 
Sbjct: 753 VLYY---VIDRVARLIAPFTPFIAEYMYQALM 781



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 15  YPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF 72
           YP+   PHIG A+   + D + R+ R+ G  V    G D HG  I  K  Q  GV+ K  
Sbjct: 56  YPSGDIPHIGTAWNKALKDAVLRYKRMKGYRVYDRPGYDCHGLPIEVKVEQKLGVSVKKE 115

Query: 73  VDQN 76
           +++ 
Sbjct: 116 IEER 119


>gi|145220229|ref|YP_001130938.1| leucyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189083139|sp|A4SG27|SYL_PROVI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145206393|gb|ABP37436.1| leucyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 805

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+    H+GH      +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  EKPKYYVLDMFPYPSGSGLHVGHLEGYTASDISARYRRSRGYNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    +  SYD    I TT+  +    + ++ K+ + G  
Sbjct: 89  AIKTGTHPSDTTQKNIANFKETLQAMGFSYDWSREINTTDPGYFQWTQWIFLKLHEMGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y       + +   A   ++EV  K ADG        P+ QW+       +++AY D+LL
Sbjct: 149 YMSEVDVNWCVELRAVLANEEVEEKLADG--LTVVRRPLRQWV------LKITAYADRLL 200



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 21/194 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D +K  +W   DL++ G +    H +Y   W   L     +S   P  +++F+ G IL +
Sbjct: 514 DPAKEAYWMNVDLYIGGAEHAVLHLLYARFWHKVLFDLKVVSTKEPF-QRLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS GNVI    V++  G DA+R +         + F       K  N +   GI
Sbjct: 573 DNEKMSKSRGNVIPADHVLQTYGADAVRLY---------EMFLGPLEQVKPWNTNGIEGI 623

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +SR   ++  + +G          S + +L    + ++++  + +N   + A+A+++
Sbjct: 624 SRFLSRVWRLVWPEPEGTRADLSTLAPSPD-LLRRMHKTIKKVAADTENLKFNTAIAEMM 682

Query: 419 SLVSEVDRYFDAQK 432
              +E+ R  +  +
Sbjct: 683 VFTNELHRTGEGSR 696


>gi|307720718|ref|YP_003891858.1| Isoleucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978811|gb|ADN08846.1| Isoleucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 922

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + + +     +   G     +PADL+V G D  R  F +  + +  +    
Sbjct: 539 ILDVWFDSGSTWNSVLKSRNYDAGD----YPADLYVEGSDQHRGWFQSSLFLSSAVEHKA 594

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF +  KGEK+SKS GNVI P +V++E G + LR ++ 
Sbjct: 595 PY-KGVLTHGFTVDEKGEKMSKSKGNVIAPEKVLKEYGSEILRLWVA 640



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   ++ D++ + +  +G  V FT G D HG  I +  +
Sbjct: 58  YANGHIHIGHALNKVLKDIIIKNNYFNGKSVRFTPGWDCHGLPIEQQVE 106


>gi|288800157|ref|ZP_06405616.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333405|gb|EFC71884.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 1192

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 120/256 (46%), Gaps = 30/256 (11%)

Query: 252 KAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           K   +PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +G
Sbjct: 686 KGLAFPADFINEGVDQTRGWFFTLHAIATMIFDSVAF-KNVISTGLVLDSKGNKMSKHVG 744

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRS 365
           NV++P ++IE+ G D++R++++       +  +DK+G   ++++    L N      + S
Sbjct: 745 NVVNPFDMIEKYGADSVRFYMMTNSEPWDNLKFDKEGVDEVRRKFFGTLYN------TYS 798

Query: 366 VSMILKDYDGM------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
              +  + DG       +P      E D  ILS    +++ + + +      +A   + +
Sbjct: 799 FFALYANVDGFSFAEKEVPL-NDRPEIDRWILSCLHTLIRNVDKELSEYSPTKAGRLIDA 857

Query: 420 LVS-EVDRYF---DAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKI 473
            V+ ++  ++   + ++ W  K+ + D+ S    LY  +E I +   LL  F P  A+++
Sbjct: 858 FVNDDLSNWYVRLNRKRFWG-KEMSTDKLSAYQTLYTCLETISK---LLAPFAPFFADRL 913

Query: 474 FDILFVADENRCFQSL 489
           +  L  A     F S+
Sbjct: 914 YCDLMSATHREAFDSV 929


>gi|253680785|ref|ZP_04861588.1| isoleucine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562634|gb|EES92080.1| isoleucine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 1038

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 14/209 (6%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K+SKS GNV+DP +V+E  G DA R+      A      + +D +K+     L+  +
Sbjct: 587 KGLKMSKSKGNVVDPFDVLENEGADATRWHFYTASAPWLPTRFSEDDVKETQRKFLST-L 645

Query: 359 GNLVSRSVSMILKDYDGMIPT--PGAFTES--DESILSVCSRVLQEIRENMQNQLIHRAL 414
            N+ S  V  +  + D   PT      +E+  D+ I+S  + +++ I EN+ N  I  A 
Sbjct: 646 WNVYSFYV--LYAEIDKFNPTEYKDFVSENVMDKWIISKLNTLIKSIGENLDNYKITEAA 703

Query: 415 AQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLA 470
             +   V E+  ++   +  + W  + T+    +   Y T+ +V+  L  +   FVP ++
Sbjct: 704 LTLEDFVDELSNWYVRRNRSRFWSTELTDDKIGA---YTTLHKVLTTLVKVAAPFVPFMS 760

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFML 499
            +I+  L V  +    +S+     P + L
Sbjct: 761 EEIYQNLVVNLDKEAVESVHLCTWPQYNL 789



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N +PH+GH    ++ D++ R+  + G  VL   G D HG
Sbjct: 51 NGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHG 89


>gi|171319741|ref|ZP_02908829.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095013|gb|EDT40036.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 945

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A ++    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDQLQF-PADLYLEGSDQHRGWFHSSLLTASMIDGRAPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HGF +  +G K+SKSLGN +DP EV   +G + +R ++      G+    ++  +
Sbjct: 607 KGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGELAISEE--I 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            KRV       I N + R +   L D+D     +P    + E D   ++  +++  E+  
Sbjct: 665 LKRVTEGYRR-IRNTL-RFLLANLSDFDYAQHAVPV-DEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRASTVLY-VTV 452
           + +    H  +A++ +  SE           DR + +      +++    A T LY +T 
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRS----AQTALYHLTH 777

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
            ++R LA  L +F  + A K+F
Sbjct: 778 GLLRVLAPFL-SFTAEEAWKVF 798



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPI 110


>gi|88813005|ref|ZP_01128248.1| Isoleucyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
 gi|88789783|gb|EAR20907.1| Isoleucyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
          Length = 940

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T + T        +  +    PADL++ G D  R  F +    + ++ A  
Sbjct: 532 ILDVWFDSGTTHTTVL------ERREELSQPADLYLEGSDQYRGWFQSSLLTSMMVRATP 585

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF +  +G K+SKS GNV+ P  V++ +G D LR ++ 
Sbjct: 586 PY-RAVLTHGFTVDEQGRKMSKSRGNVVAPQTVMKTLGADVLRLWVA 631



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 19/138 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           + R+   +     Y N + HIGHA   I+ D++ +   LDGLD  +  G D HG     K
Sbjct: 46  RGRKHFILHDGPPYANGEIHIGHAVNKILKDIIVKSRTLDGLDAPYVPGWDCHGLPIEHK 105

Query: 58  IAKAAQNAG--VTTKVF-----------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           + ++    G  VT K F           V+   R+F+ +  V D  +  ++    +   D
Sbjct: 106 VEQSLVEVGKTVTPKDFRAACRRFAAEQVEGQRRDFQRLGVVGDWDH-PYLTMDFRTEAD 164

Query: 105 TCRILWKKISDKGDIYKG 122
             R+L   ++ KG + +G
Sbjct: 165 ILRVLGDLVA-KGHLKRG 181


>gi|328541707|ref|YP_004301816.1| Leucyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
 gi|326411459|gb|ADZ68522.1| Leucyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 870

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 18/179 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LWKKISD 115
              V  K +  +N    R    ++ +S D        R   TC +        L+ +  +
Sbjct: 93  QNKVHPKDWTYENIAAMRGQLKIMGLSLD------WSREFATCDVDYYTQQQRLFLRFLE 146

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            G +Y+      +   D     +++V    DG+ + +    V+  E   +FFR+S Y +
Sbjct: 147 AGLVYRKKSKVNWDPVDMTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFRISDYSE 201



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/129 (20%), Positives = 63/129 (48%), Gaps = 12/129 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++IE  G D  R+F++ +    +D  + ++G++         G   
Sbjct: 627 EKMSKSKKNTVDPTDIIETYGADTARWFMLSDSPPERDVIWTEEGVQ---------GSWR 677

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
            V R+  ++ +  +   P   A  +   + L +     + +  +  +++    +RA+A++
Sbjct: 678 FVQRAWRLVAEVAEKTDPRAAAVPDMGAAALELRRATHKTIAAVSRDIEGLGFNRAVARI 737

Query: 418 ISLVSEVDR 426
             LV+++ +
Sbjct: 738 YELVNQIGK 746


>gi|320354487|ref|YP_004195826.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122989|gb|ADW18535.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 935

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  F +    +       P  + V +HG+++  +G+K+SKS+GNV+ 
Sbjct: 553 WPADLYLEGSDQHRGWFQSSLLTSVGTRGRAPY-QGVLTHGYVVDGQGKKMSKSVGNVVA 611

Query: 313 PIEVIEEVGVDALRYFLVRE 332
           P +VI++ G + LR ++  E
Sbjct: 612 PQQVIDQYGAEVLRLWVASE 631


>gi|283770255|ref|ZP_06343147.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460402|gb|EFC07492.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 917

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAIDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|220908415|ref|YP_002483726.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782492|sp|B8HM05|SYL_CYAP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219865026|gb|ACL45365.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 858

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 38/91 (41%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  RSKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARVRRMQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G+    +   N    R     L +SYD
Sbjct: 90  AIKRGIHPAKWTADNITQMRSELKRLGLSYD 120


>gi|167948225|ref|ZP_02535299.1| leucyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 168

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA+
Sbjct: 32  KEKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGLPAENAAR 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     L   Y  D  + T +  ++   + L+ ++  KG +Y+
Sbjct: 92  KNRAAPAAWTYDNIDYMKGQLKRLGFGYDWDRELATCKPDYYKWEQWLFTELYKKGLVYR 151


>gi|42527840|ref|NP_972938.1| leucyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|60390722|sp|Q73K81|SYL_TREDE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|41818668|gb|AAS12857.1| leucyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 858

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 19/182 (10%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++LYI     YP+    H+GH       D+ +RF R+ G +VL   G D  G      A 
Sbjct: 34  KRLYILDMFPYPSGDGLHVGHPEGYTATDIYSRFLRMSGYNVLHPMGFDSFGLPAENYAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   +   +N   FR     + +SY  D  I T+E+ ++   + ++ ++  KG  Y+
Sbjct: 94  KTGIHPLITTRKNMETFRKQIKSIGLSYDWDREISTSEESYYKWTQWIFLQLFKKGLAYE 153

Query: 122 G------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                  C S    L +E   +      GA  Q  N +    QW+       +++ Y ++
Sbjct: 154 KEAPINWCPSCLTGLANEEVKDGKCERCGAQIQRKNLR----QWI------LKITEYAER 203

Query: 176 LL 177
           LL
Sbjct: 204 LL 205


>gi|313676555|ref|YP_004054551.1| isoleucyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943253|gb|ADR22443.1| Isoleucyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 1120

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 18/156 (11%)

Query: 191 ERRNEVISFVKSGL------KDLSLSRK-------TFDWGIKIPDDPQYIMYVWIDALTN 237
           E RNEV   VK+G       +D  L R        T + G K+  +P  I  VW D+   
Sbjct: 540 ELRNEVNKSVKAGFMEEELAEDFDLHRPYVDDVILTSESGQKMFREPDLID-VWFDSGAM 598

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGF 295
                 Y    + +  K +PAD    G D  R  F  ++  + +L  ++   K V ++G 
Sbjct: 599 PYAQWHYPFENNETFDKNYPADFIAEGVDQTRGWFFTLHAISGMLFDSVAY-KNVIANGL 657

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +L K G K+SK LGN I+P E I++ G DA R++++
Sbjct: 658 VLDKEGNKMSKRLGNAINPFETIKKYGPDATRWYMI 693


>gi|309389003|gb|ADO76883.1| Isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 931

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       DN        WPA +++ G D  R  F++    A       
Sbjct: 531 IMDVWFDSGSSHKAVLEARDNLS------WPAQVYLEGTDQYRGWFNSSLLTAVATEGVA 584

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  ++V ++GF +  KG K+SKS GNV+ P +VI++ G D LR ++ 
Sbjct: 585 PY-REVITNGFTVDKKGNKMSKSKGNVVSPHKVIDQYGADILRLWVA 630



 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D + RF  L+G    +  G D HG  I
Sbjct: 58  YANGDIHIGHALNKILKDFVTRFATLNGYYSPYIPGWDTHGLPI 101


>gi|294675814|ref|YP_003576429.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474634|gb|ADE84022.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 851

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 38/198 (19%)

Query: 286 LPKKV-FSHGFILHKGEKI--------SKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           LP++V    G +   GEK+        SKS  NV+DP+ +I + G D  R+F++ +    
Sbjct: 597 LPEEVDLETGTLKATGEKVEIIPSAKMSKSKKNVVDPMNIIAQFGADTARWFVMSDSPPE 656

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G +          + NL  R  S+     D + P        DE++L    R
Sbjct: 657 RDVEWTASGAEAACKH--LTRVWNLCDRIASLP----DDLPP------REDEALLRAMHR 704

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + ++  +++N   ++A+A++    + + +  DA KP                V  + +R
Sbjct: 705 AIADVTFSIENFAFNKAIAKLYEFTNTLAKS-DASKP----------------VRQQAMR 747

Query: 457 QLAILLQAFVPKLANKIF 474
            LA L+   VP LA  ++
Sbjct: 748 TLAQLMAPMVPHLAEDVW 765



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKMSCGFSVLHPMGWDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N  + R     L +S D   +F  T +  ++   + ++  + + G +Y
Sbjct: 91  ERGGHPKDWTYSNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQAMFLDMLEAGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  + D     +++V    DG+ + +    V+  E   +FF++S Y  +LL+
Sbjct: 150 RKNAVVNWDPV-DMTVLANEQV---EDGRGWRSGAL-VERKELTQWFFKISDYAGELLA 203


>gi|302383349|ref|YP_003819172.1| isoleucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193977|gb|ADL01549.1| isoleucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 979

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 13/146 (8%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNP-- 248
           +++ ++ G  D   +R   D+ + + D   Y     I+ VW D+   +  T    D    
Sbjct: 548 IVAAIEQGGADAWYTRADSDF-LGLHDPANYEKIEDILDVWFDSGCTHAFTLETRDPAHG 606

Query: 249 -DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304
             G +   WPA+L++ G D  R  F +            P    V +HGF     GEK+S
Sbjct: 607 YTGDRPSHWPANLYLEGSDQHRGWFQSNLLEGSGTRGRAPY-DAVLTHGFTQDENGEKMS 665

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLV 330
           KS GN  DP  VI+E G D LR ++ 
Sbjct: 666 KSRGNTTDPAVVIKESGADILRLWVA 691


>gi|288941693|ref|YP_003443933.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897065|gb|ADC62901.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 942

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D   + +T    L++ DG      PADL++ G D  R  F +    +  +    P  
Sbjct: 539 VWFD---SGVTHACVLEHRDGLST---PADLYLEGSDQHRGWFQSSLMTSVAMHGRAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++V +HGF +  KGEK+SKS GNV+ P +V++ +G D +R ++ 
Sbjct: 592 RQVLTHGFTVDAKGEKMSKSKGNVVSPQDVMKTLGADIIRLWVA 635



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N + HIGHA   ++ D++ +   LDG D  +  G D HG  I
Sbjct: 59  YANGEIHIGHAVNKVLKDIIVKSRTLDGFDAPYVPGWDCHGLPI 102


>gi|53713564|ref|YP_099556.1| isoleucyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81825004|sp|Q64U07|SYI_BACFR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52216429|dbj|BAD49022.1| isoleucyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 1141

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 639 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLGNA 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 698 VDPFSTIEQYGSDPLRWYMITNSSPWDNLKFDVDGIEE 735


>gi|326575204|gb|EGE25132.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 1095

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMVSTDELISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|319440905|ref|ZP_07990061.1| valyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 952

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 33/203 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           ++  W  +     +T G+ +  D  K KF+P  + V G DIL F       F   A+   
Sbjct: 484 VLDTWFSSALWPFSTMGWPEQSDELK-KFYPTSVLVTGYDILFFWVARMMMFGTFADTIT 542

Query: 284 ---------------------LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321
                                +P    VF HG +  + G K+SKSLGN IDP++ + + G
Sbjct: 543 GSTLGTGESGTSADERNGRPQVPF-TDVFLHGLVRDEHGRKMSKSLGNGIDPMDWVRDYG 601

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRSVSMILKDYDGMIPT 379
            DALR+ L R    G D    +D  +   N    L N     +     ++ ++     P 
Sbjct: 602 ADALRFTLARGANPGTDLPIGEDSAQSSRNFATKLFNATKFALMNGAEVLGENEKQNFPA 661

Query: 380 PGAFTESDESILSVCSRVLQEIR 402
               T++D  IL      L+E+R
Sbjct: 662 REELTDADRWILD----KLEELR 680


>gi|296112727|ref|YP_003626665.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920421|gb|ADG60772.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 1095

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMVSTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|205374573|ref|ZP_03227368.1| leucyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 653

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 32/167 (19%)

Query: 240 TTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVF 291
           T   YL  P+  K   W P D+++ G +    H +Y   W  FL    +   K    K+F
Sbjct: 358 TNEEYLAAPE--KLDEWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLF 415

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIA---CGKDG-- 339
           + G IL    EK+SKS GNV++P +++E  G D LR +      L   IA    G DG  
Sbjct: 416 NQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGPLEASIAWSTTGLDGSR 475

Query: 340 ---------FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
                    F  +DG + ++V A     +     ++V  + +DY+G+
Sbjct: 476 RFLDRIWRLFITEDGTVSEKVQATADASLDKTYHQTVKKVTEDYEGL 522


>gi|195478617|ref|XP_002086516.1| GE23171 [Drosophila yakuba]
 gi|194186306|gb|EDW99917.1| GE23171 [Drosophila yakuba]
          Length = 938

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 46/211 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+ + +    G        K K   ADL++ G D  +F   +  + L+S  A  
Sbjct: 559 ILDIWFDSGSTWSAVLG--------KDKI--ADLYLEGYD--QFTGWFQSSLLMSIAARE 606

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P K +F HGF +  KG K+SKSLGNVI P ++ ++ G DALR+++             
Sbjct: 607 CSPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKKYGTDALRWWVASH-GTQHMSITV 665

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQ 399
            D L ++   +L+   G L  R +  ++ D    + +IPT      SD+S L   +R L 
Sbjct: 666 SDKLLQQAAENLSKVRGTL--RYLKGVIGDKQSAEKLIPT------SDKSYL---NRFL- 713

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                         L+Q++   SEV++ ++A
Sbjct: 714 --------------LSQLVEFGSEVEKLYNA 730


>gi|209554437|ref|YP_002284773.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|238064873|sp|B5ZBI3|SYL_UREU1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209541938|gb|ACI60167.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGADTLRIY 606


>gi|229496737|ref|ZP_04390448.1| valyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316283|gb|EEN82205.1| valyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 873

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANL---- 284
            W  +    +T  G +D+ D  +  ++ P ++ V   DIL F    W A ++ A      
Sbjct: 457 TWFSSWLWPITVFGDIDDKDNKELNYYYPIEVLVTAPDILFF----WVARMIIAGYRYRG 512

Query: 285 --PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  + V+  G +   +G K+SKSLGN  DP+ +IE+ G D +R  ++   + G D  Y
Sbjct: 513 QRPF-RDVYLTGIVRDAQGRKMSKSLGNSPDPLNLIEKYGADGVRVGMMMATSAGNDLLY 571

Query: 342 DKDGLKKRVNADLANGIGN 360
           D+  L++  N    N I N
Sbjct: 572 DESLLEQGRN--FCNKIWN 588


>gi|195867880|ref|ZP_03079879.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660457|gb|EDX53715.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 806

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNVI+P ++I   G D LR +
Sbjct: 583 KSKGNVINPDDIIASHGADTLRIY 606


>gi|60681847|ref|YP_211991.1| isoleucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253565554|ref|ZP_04843009.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|81315088|sp|Q5LCU8|SYI_BACFN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|60493281|emb|CAH08065.1| isoleucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251945833|gb|EES86240.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301163339|emb|CBW22889.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 1141

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 639 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLGNA 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 698 VDPFSTIEQYGSDPLRWYMITNSSPWDNLKFDVDGIEE 735


>gi|317129281|ref|YP_004095563.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474229|gb|ADU30832.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 920

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PAD+++ G D  R  F++    A  ++   P  K V SHGF L  +G K+SKS+GNV+ P
Sbjct: 548 PADMYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KTVLSHGFTLDGEGRKMSKSVGNVVVP 606

Query: 314 IEVIEEVGVDALRYFL 329
            +V++++G D LR ++
Sbjct: 607 DKVMKQLGADILRLWV 622



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 23/52 (44%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A    G
Sbjct: 59  YANGDIHMGHALNKILKDFIVRYKSMTGFHAPYVPGWDTHGLPIETALTKKG 110


>gi|167856258|ref|ZP_02478991.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852615|gb|EDS23896.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 938

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVQQRPEFNGNSA-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N     +V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVILPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G+   R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGDTYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|327475196|gb|AEA77193.1| leucyl-tRNA synthetase [Bacillus aquimaris]
          Length = 650

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 30/158 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K + W P D ++ G +    H +Y   W  FL    +   K    K+F+ G IL   
Sbjct: 360 DAKKMENWLPVDTYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGEN 419

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDG-------------- 339
            EK+SKS GNV++P EV+E  G D LR +      L   IA   +G              
Sbjct: 420 NEKMSKSKGNVVNPDEVVESHGADTLRLYEMFMGPLEASIAWSTNGLDGARRFLDRVWRL 479

Query: 340 FYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
             ++DG L  +V     + +    +++V  + +DY+G+
Sbjct: 480 LVEEDGTLSSKVTDAPNSDLDKTYNQTVKKVTEDYEGL 517


>gi|326569879|gb|EGE19929.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 1095

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMVSTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|326563784|gb|EGE14035.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 1095

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMVSTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 805

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 24/159 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK--------- 112
             N GV  K   +     FR +    + +Y+   R  E+      R  W           
Sbjct: 105 LTNKGVKRK---EMTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAY 159

Query: 113 ----------ISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                     ++ KG IYKG    ++S   E+   + E+
Sbjct: 160 EAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|254464521|ref|ZP_05077932.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685429|gb|EDZ45911.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 1000

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +       D  DG++     AD+++ G D  R  FH+    A       
Sbjct: 607 VLDVWFDSGSTHAFV--LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSLLQACGTKGRA 662

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKSLGN I P EV+++ G D LR ++ +
Sbjct: 663 PY-RNVVTHGFTLDEKGMKMSKSLGNTIVPDEVVKQYGADILRLWVAQ 709



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           ER+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG       
Sbjct: 61  ERKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKI 120

Query: 56  -QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            ++  K  +N      V   Q  R F D    ++I  ++F R
Sbjct: 121 EEQYRKKGKNKDAVPVVEFRQECRAFAD--SWVEIQREEFKR 160


>gi|254883975|ref|ZP_05256685.1| valyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|254836768|gb|EET17077.1| valyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
          Length = 479

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 132/305 (43%), Gaps = 24/305 (7%)

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           ++ +YY  + E+++  +     I F K    DLS++       +K  +D   ++  W  +
Sbjct: 18  RIPAYYIDNGEYVVAKDIEEAYIIF-KQKYPDLSIT------DLKQDED---VLDTWFSS 67

Query: 235 LTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFS 292
               +++ G + + +  + K++ P ++ V   DI+ F       F L     +P +KV  
Sbjct: 68  WLWPISSFGGIHDKNNEELKYYYPINVLVTAPDIIFFWVARMIMFGLYWKNEIPFEKVCF 127

Query: 293 HGFILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            G +  K + K+SKSLGN  DPI++I + G D +R  ++     G D  +D+    +  N
Sbjct: 128 TGLVRDKSKRKMSKSLGNSPDPIDLINKYGADGVRVGMLLCAPAGTDIIFDEQQCLQGRN 187

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
               N + N      S  +   D  +  P    ++ E   ++ S    EI  N++N  + 
Sbjct: 188 --FVNKLWNAYKLINSWTV---DNNLQQPTYSQQAIEWFTNLISYTQLEIEHNIENCRMS 242

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  V  L+ +     Y +  KP + KK +     T +  T  +   +      F+P +
Sbjct: 243 DALHNVYELIWDNFCPYYLEIIKPVDSKKID----KTTMESTNIIFSAILKFAHLFIPFV 298

Query: 470 ANKIF 474
             +I+
Sbjct: 299 TEEIW 303


>gi|58337877|ref|YP_194462.1| leucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904527|ref|ZP_04022332.1| leucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311412|sp|Q5FIP3|SYL_LACAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58255194|gb|AAV43431.1| leucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867736|gb|EEJ75157.1| leucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 804

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      E+D  +  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDENDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +V    N  NF
Sbjct: 47  HVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEVVTKNNIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 803

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L  +G K+SKS+GN++ P
Sbjct: 548 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGEGRKMSKSIGNIVVP 606

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 607 KKIMDQLGGDILRLWV 622



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 60  YANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQALTNKGVKRK---E 116

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 117 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 174

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 175 KGYIYKGQKPVYWSPTSESALAEAEI 200


>gi|282916443|ref|ZP_06324205.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282319883|gb|EFB50231.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 917

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAIDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|254436724|ref|ZP_05050218.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252170|gb|EDY76484.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 770

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 12/181 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLATGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADV-----LDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
              G+  K   D   +N  DM        L I +     T +  ++   + L+  + D G
Sbjct: 90  MQTGIHPK---DYTYQNIDDMVAQMKPLGLGIDWSRMFATCDPEYYGQQQSLFIDMLDAG 146

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            I +   +  +   D     +++V  G  G    A+   V+  +   +FF++S Y D+LL
Sbjct: 147 MIDRKNATVNWDPVDMTVLANEQVIDGK-GWRSGAE---VERKDLTQWFFKISDYADELL 202

Query: 178 S 178
            
Sbjct: 203 G 203



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 61/125 (48%), Gaps = 13/125 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I++ G D  R+F++ +    +D  +   G      A+      + 
Sbjct: 623 KMSKSKNNVVDPVAIIDKYGADTARWFVLSDSPPERDVEWTASG------AEATFKHLSR 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R    I+++ D       A  + DE+IL    + + E+ + +++   + ++A++    
Sbjct: 677 VHRIACEIVENTD-------AANDQDEAILRDMHKAIFEVTQGVESFGFNASIAKLYGFT 729

Query: 422 SEVDR 426
           + + +
Sbjct: 730 NAIAK 734


>gi|73985817|ref|XP_864633.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           isoform 2 [Canis familiaris]
          Length = 176

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 42/91 (46%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A    +  + +   N  + R   D L + + 
Sbjct: 139 AIERNLHPESWTQSNIEHMRKQLDRLGLCFS 169


>gi|315124298|ref|YP_004066302.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018020|gb|ADT66113.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 645

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 22/136 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 217 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 271

Query: 278 FLL--SAN----LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            ++  S N    LP  K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L 
Sbjct: 272 RMMFQSTNALHQLPF-KDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLA 330

Query: 331 REIACGKDGFYDKDGL 346
                G+D     D L
Sbjct: 331 LLAIQGRDIKLSNDKL 346


>gi|307564823|ref|ZP_07627351.1| leucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346545|gb|EFN91854.1| leucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 960

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +  ++N   +R+  D +   +  D  IRT +  ++
Sbjct: 88  YAIQTGQHPAITTEKNIARYREQLDKIGFCFDWDREIRTCDPEYY 132


>gi|88858003|ref|ZP_01132645.1| isoleucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819620|gb|EAR29433.1| isoleucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 942

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++ + P  ++V +HGF +   G K+SKSLGNVI P
Sbjct: 561 PADLYLEGSDQHRGWFMSSMMTSVAINGHAPY-RQVLTHGFTVDENGRKMSKSLGNVISP 619

Query: 314 IEVIEEVGVDALRYFLV 330
            +V+ ++G D LR ++ 
Sbjct: 620 QDVMNKLGADILRLWVA 636


>gi|326566797|gb|EGE16936.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326576710|gb|EGE26617.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 1095

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMVSTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|294837254|ref|ZP_06781937.1| isoleucyl-tRNA synthetase [Acinetobacter sp. 6013113]
 gi|294858035|ref|ZP_06795804.1| isoleucyl-tRNA synthetase [Acinetobacter sp. 6013150]
          Length = 945

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+              ++  +L + +G  P+  A    D  ++++   +LQ  
Sbjct: 659 RVSDSYRRIR------------NTLRFLLANLNGFKPSTDALAVDD--LIALDQYILQRA 704

Query: 402 RENMQN 407
            E  Q 
Sbjct: 705 NEVQQT 710



 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAVTFRKHCREYALKQIDLQRTDFKR 152


>gi|294495051|ref|YP_003541544.1| valyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666050|gb|ADE35899.1| valyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 865

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 23/191 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W+D+    L  TG+L + +       PA L   G DI+R  A Y  + L S  L  
Sbjct: 445 VLDTWMDSSLTALHVTGWLTDHEMRS----PAQLRPQGHDIIRTWAFY--SILRSKALQD 498

Query: 287 PK---KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +    +  +G +L + G K+SKS GN+I P EV+++   DA R +     + G D  + 
Sbjct: 499 SRPWDSIMINGMVLGEDGHKMSKSRGNIISPEEVVDQYSSDAFRQWAAIGGSTGSDVMFR 558

Query: 343 -KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES----DESILSVCSR 396
            KD +     +   N + ++   S+S +    + ++P  P   T S    D  +LS  +R
Sbjct: 559 WKDVVS---GSRYFNKMWSIFRFSMSHL----EELLPEIPEVATSSLGTVDRWLLSKLNR 611

Query: 397 VLQEIRENMQN 407
           ++  + ENM N
Sbjct: 612 LIISVTENMDN 622



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I T   YP    HIG++      D +AR+ R+ G +V+F  G D HG       +     
Sbjct: 39  IDTPPPYPTGNFHIGNSLNWCYIDFVARYKRMQGFNVMFPQGWDCHGLPTEVKVEEIHGI 98

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
           TK  V +    FR + + L +   + +R T
Sbjct: 99  TKNQVPR--AEFRKLCEELTLGNIEKMRQT 126


>gi|294660270|ref|NP_852935.2| methionyl-tRNA synthetase+E430 domain-containing protein
           [Mycoplasma gallisepticum str. R(low)]
 gi|284811926|gb|AAP56503.2| methionyl-tRNA synthetase (MetRS) domain protein [Mycoplasma
           gallisepticum str. R(low)]
 gi|284930397|gb|ADC30336.1| methionyl-tRNA synthetase (MetRS) domain protein [Mycoplasma
           gallisepticum str. R(high)]
          Length = 224

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 4/159 (2%)

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           ++  +DG   K  +++ +N+DL N +GNLV R + M+    +  I    A  E ++  L+
Sbjct: 1   MSLSEDG---KRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLA 57

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVT 451
              ++  E  + ++   I  A+  V+++  E     + +KPWEL K N  +  + VL+  
Sbjct: 58  DLQKLPAEFEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANVLFAG 117

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              IR + +LL+  +   + ++++ +    E    ++++
Sbjct: 118 TCAIRTVFVLLEPILTTKSKEVYEQMNFTPEQTQLKNIN 156


>gi|300707479|ref|XP_002995945.1| hypothetical protein NCER_101032 [Nosema ceranae BRL01]
 gi|263511682|sp|C4V924|SYVC_NOSCE RecName: Full=Probable valyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Valine--tRNA ligase; Short=ValRS
 gi|239605191|gb|EEQ82274.1| hypothetical protein NCER_101032 [Nosema ceranae BRL01]
          Length = 883

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 254 KFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K++P  L   GKDIL F    +   +  L+  +P  KKV  HG +    G K+SKSLGNV
Sbjct: 536 KYFPTSLLETGKDILFFWVGRMVMMSLELTGKVPF-KKVLLHGIVRDAYGRKMSKSLGNV 594

Query: 311 IDPIEVIEEVGVDAL 325
           IDPI VI+   ++ L
Sbjct: 595 IDPIHVIDGASIETL 609


>gi|255693145|ref|ZP_05416820.1| leucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260621100|gb|EEX43971.1| leucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 944

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWSREIRTCDPEYYHWTQWAFQKM 142


>gi|163743397|ref|ZP_02150777.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383391|gb|EDQ07780.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 857

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 8/183 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHSVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T ++ ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYANIDTMVEQMKPLGLSLDWSRMFATCDESYYGQQQALFLDFLEKGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W  +      N  E  +G  G    A    V+  E   +FF++S Y D+LL+ 
Sbjct: 150 RKNAVVNWDPVDMTVLAN--EQVEGGRGWRSGAL---VERRELTQWFFKISDYSDELLTA 204

Query: 180 YES 182
            ++
Sbjct: 205 LDT 207



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 29/174 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 628 KMSKSKNNVVDPLHIISSYGADTARWFVLSDSPPERDVEWTASGAE--AAHKHLNRVWNL 685

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M           PGA    DE +L    + ++++  +++    + A+A++ S  
Sbjct: 686 CDRIGEM----------DPGASGNGDEDLLREMHKAIRDVTLSIETFGFNAAIAKLYSFT 735

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + + +                +A T      + I  LA L+    P LA  I++
Sbjct: 736 NTLAK---------------SKAGTA--AQKQAIMTLAQLMSPMTPHLAEDIWN 772


>gi|326560980|gb|EGE11345.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326567363|gb|EGE17478.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 1094

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 726 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 783

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 784 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 831

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 832 IRFLLANTDDFDPKTDMVSTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 891

Query: 421 VSE 423
            S+
Sbjct: 892 CSQ 894



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 62  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 121

Query: 67  VT 68
            T
Sbjct: 122 AT 123


>gi|169797772|ref|YP_001715565.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213155430|ref|YP_002317475.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215485121|ref|YP_002327362.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301347569|ref|ZP_07228310.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510772|ref|ZP_07236009.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301596562|ref|ZP_07241570.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169150699|emb|CAM88609.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213054590|gb|ACJ39492.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986634|gb|ACJ56933.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 945

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+              ++  +L + +G  P+  A    D  ++++   +LQ  
Sbjct: 659 RVSDSYRRIR------------NTLRFLLANLNGFKPSTDALAVDD--LIALDQYILQRA 704

Query: 402 RENMQN 407
            E  Q 
Sbjct: 705 NEVQQT 710



 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 ERVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|49473906|ref|YP_031948.1| isoleucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81647236|sp|Q6G0K6|SYI_BARQU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49239409|emb|CAF25747.1| Isoleucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 971

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 33/202 (16%)

Query: 187 ILPIERRNEVI----------SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           IL  ER NE I          ++   G ++  L  +  +  +++ D    I+ VW D+  
Sbjct: 526 ILKDERVNERILRAFEAEGADAWFAEGARERFLGERAHESWVQVLD----ILDVWFDSGA 581

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHG 294
           ++   +  L++ D  K   WPAD++  G D  R  F +    +    A  P  K V +HG
Sbjct: 582 SH---SFVLEDRDDLK---WPADVYFEGSDQHRGWFQSSLLESCGTRACSPY-KAVITHG 634

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV--- 350
           F L   G+K+SKSLGN + P E+I+  G D  R +++         +++   L K++   
Sbjct: 635 FTLDENGKKMSKSLGNTVVPQEIIKTSGADIFRLWVM------TTDYWEDQRLGKQILQT 688

Query: 351 NADLANGIGNLVSRSVSMILKD 372
           N DL   + N +   + ++  D
Sbjct: 689 NMDLYRKLRNAIRWMLGILAHD 710



 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+R    +     Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 52  KDRPLYILHDGPPYANGHIHIGHALNKVLKDVIIRSFQMRGFNANYVPGWDCHGLPI 108


>gi|116201059|ref|XP_001226341.1| hypothetical protein CHGG_08414 [Chaetomium globosum CBS 148.51]
 gi|88176932|gb|EAQ84400.1| hypothetical protein CHGG_08414 [Chaetomium globosum CBS 148.51]
          Length = 880

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 128/302 (42%), Gaps = 35/302 (11%)

Query: 203 GLKDLS--------LSRKTFDWGIKIPDDPQYIMYV-WIDALTN----YLTTTGYLDNPD 249
           GLK+LS        + R   D GI IP      +YV W+  LT     Y +     +N D
Sbjct: 344 GLKELSGFEGPLDDIHRDKVD-GITIPSKRGKGVYVEWMKFLTAGSMPYASNHFPFENKD 402

Query: 250 GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK-ISKS 306
                 +PAD    G D  R  F+ +      L    P  + V  +G +L + +K +SKS
Sbjct: 403 EFAEGLFPADFIAEGLDQTRGWFYILTILGNKLFGKSPF-RNVIVNGLVLAQDQKKMSKS 461

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKK---RVNADLANGIGNLV 362
           L N  DP  +I+E G DALR +L+   +  G+   +++ G+K+   RV   L N      
Sbjct: 462 LRNYPDPTIIIDEYGSDALRLYLINSPVVKGEYIRFNESGIKEVVSRVLLPLWNSYRFFH 521

Query: 363 SRSVSMILKDYDG-------MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +  +++ K   G       +    G     D  IL  C  +L+ + E M+     R L 
Sbjct: 522 EQ--TLLYKKTTGQDFAVRAVWDNGGPQNVMDRWILPDCQSLLRFMEEEMRV----RRLL 575

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           QVI+ ++     F+ ++   +     D  +  L   ++V+  L   L  F P +   I+ 
Sbjct: 576 QVINNLTNWYIRFNRKRLKGVVGLGLDDTTAALNTLLQVLFTLMRALAPFAPFITEHIYQ 635

Query: 476 IL 477
           +L
Sbjct: 636 LL 637


>gi|329113640|ref|ZP_08242418.1| Leucyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697047|gb|EGE48710.1| Leucyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 872

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/191 (19%), Positives = 81/191 (42%), Gaps = 17/191 (8%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K+  +    + + EK+SKS  N + P+ +IE  G D  R+F++ +    +D  + + G+ 
Sbjct: 614 KRGTTEPVTVGRVEKMSKSKRNTVAPVAIIERFGADTARWFVLSDSPPERDMEWTEAGVA 673

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                  A      + R++  + +D       P       +++     R +  + E ++ 
Sbjct: 674 G------AARFNQRLFRTIRTVAQDIPATTECPTDIDRQADTLRRTTHRTIAAVTEALEG 727

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I+ A+A++  L S +          E +K+     S + +   E  + L +L    +P
Sbjct: 728 FAINVAVARIHELTSALA---------EAEKSA--TVSGMAFARREAAQTLCLLCAPMMP 776

Query: 468 KLANKIFDILF 478
            LA ++F ++ 
Sbjct: 777 HLAEEMFALIM 787



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 11/196 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA+
Sbjct: 40  KPKYYVLEMFPYPSGQLHMGHVRNYALGDVIARYKRARGFSVLHPMGWDAFGLPAENAAR 99

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI-Y 120
             GV  K +   N    R     L  S  +D  I T    ++   + L+      G +  
Sbjct: 100 ERGVHPKEWTLNNIATMRGTLQRLGFSLNWDREIATCLPNYYGKQQKLFLDFLKSGLVER 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  +  W  +      N+  V    DG+ + +   P++  +   +F +++ + + LL+  
Sbjct: 160 RESWVNWDPIDQTVLANEQVV----DGKGWRSG-APIEKKQLSQWFLKITDFAEDLLNGL 214

Query: 181 ES---HPEFILPIERR 193
           ++    PE +  ++ R
Sbjct: 215 KTLDRWPERVRTMQER 230


>gi|331242579|ref|XP_003333935.1| valyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312925|gb|EFP89516.1| valyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1072

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 109/278 (39%), Gaps = 65/278 (23%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKS 306
           KF+P+ L   G DI+ F    W A +      L+  +P   +VF H  I    G K+SKS
Sbjct: 617 KFYPSSLLETGWDIIFF----WVAKMTILGVKLTGKMPF-SEVFCHAMIRDAHGRKMSKS 671

Query: 307 LGNVIDPIEVIEEVGVDA--------------LRYFLVREIA----------CGKDGF-- 340
            GNVIDPI+VI+ + +DA              L+  L  + A          CG D    
Sbjct: 672 KGNVIDPIDVIDGITLDALANQLQTGNLDEKELKTALAGQKADFGKTNGIPPCGADALRF 731

Query: 341 ----YDKDGLKKRVNADLANGIG------NLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
               Y   G  + +N D+    G       L + +   +LK  DG  P   A     E++
Sbjct: 732 ALCAYTSSG--RSINLDVLRVEGYRKFCNKLWNATRFALLKLDDGFTPRSSADPNGKETL 789

Query: 391 LSV-CSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKT---N 440
           +       L E   N+   L  R+     S V E       D Y +A KP     T   N
Sbjct: 790 VEKWILHKLNECSLNVNKALEDRSFMAATSAVHEFWLYDLCDVYIEAMKPMTAPDTPIEN 849

Query: 441 PDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
              A   LY  + E +R    LL  F+P +  +++  L
Sbjct: 850 KVSAQNTLYTCLDEGLR----LLHPFMPFVTEELWQRL 883


>gi|157804074|ref|YP_001492623.1| valyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225530|sp|A8EZQ5|SYV_RICCK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157785337|gb|ABV73838.1| valyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 813

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 19/268 (7%)

Query: 227 IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y    A L 
Sbjct: 455 VMDTWATSSVSPQLSTHGISDDFAINKNRHDKLFPMDLRPQAHEIIRTWAFYTILKAHLH 514

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 515 QNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KLGADTA 573

Query: 341 YDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFT-ESDESILSVC 394
           Y +D +K  KR+   L N     VS  +   LKD D    ++      T E D+ +++  
Sbjct: 574 YSEDVMKNGKRLVNKLWNA-AKFVSIHLHK-LKDQDKKAKLLEVKEIITNEFDKWMINKL 631

Query: 395 SRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYV 450
             ++  +   +QN     A  L +   L    D Y +  K     + N + +   + +  
Sbjct: 632 VELVNAVTNELQNYEYANAMHLTEKFFLAVFCDNYLEISKTRAYDEDNKNLSGQYSSILT 691

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
              V++ L  L   F+P +  +++ IL+
Sbjct: 692 LYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 4  REKLYI-STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          +E+ YI  T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 35 KEETYIVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMIGKNIFYPMGFDDNG 87


>gi|94984674|ref|YP_604038.1| leucyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|122986695|sp|Q1J0W5|SYL_DEIGD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94554955|gb|ABF44869.1| leucyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 819

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 10/183 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   YP+   HIGH Y  +  D  AR+ R+ G +V F  G D  G     AA 
Sbjct: 41  KTKHYALTMFPYPSGNLHIGHWYANVAPDAHARWMRMRGYNVFFPMGFDAFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRN----FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+    +   N  +    F+ M  ++D S    + T +  ++   +  + +   +G  
Sbjct: 101 KHGLNPATWTSSNIEHMLGQFKRMGTMIDWSRS--LATCDPEYYRWNQWFFTEFFRRGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +  +D+    +++V    DG+       PV+      ++ +++ Y ++LL +
Sbjct: 159 YKKDGLVNWCPKDQTVLANEQV---VDGRCERCG-TPVERRNLSQWYLKITDYAEELLDF 214

Query: 180 YES 182
            ++
Sbjct: 215 RDT 217



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 25/192 (13%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDA---LTNYLT 240
           LP+ +  E + F+ +G   L L R+       +   P       M  ++D+   +  YL+
Sbjct: 458 LPV-KLPENVEFMPTGQSPLKLDREWMRATCPVCGGPAERDTDTMDTFVDSSWYMYRYLS 516

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS----H 293
                   D + A   P DL+  G +    H +Y   W   +    L +  + F+     
Sbjct: 517 PHDDQHPFDPAHANLLPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTVQNEPFARLRNQ 576

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G IL + GEK+SKS GNV+DP +++ E G D +R +L+        G +D  G+      
Sbjct: 577 GIILGEDGEKMSKSRGNVVDPDDLVREYGADTVRTYLMFIAPWELGGPWDPSGI------ 630

Query: 353 DLANGIGNLVSR 364
              NG    +SR
Sbjct: 631 ---NGPAKWLSR 639


>gi|296135803|ref|YP_003643045.1| isoleucyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795925|gb|ADG30715.1| isoleucyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 959

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 7/108 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILR--FHAIYWPAFLLSAN 283
           I+ VW D+ T +  TT  + +  G+     P ADL++ G D  R  FH+    +  +   
Sbjct: 563 ILEVWFDSGTTH--TTVLMGSHAGAGHAGGPQADLYLEGHDQHRGWFHSSLLTSCAMYGR 620

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K + +HGF +  +G K+SKSLGN IDP++   ++G + +R ++ 
Sbjct: 621 APY-KGLLTHGFTVDSQGRKMSKSLGNGIDPLQTCNKLGAEIIRLWVA 667



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 16/131 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
           K  +     Y N Q H+GHA   I+ D++ +  +L G D  +  G D HG  I  A +  
Sbjct: 60  KFVLHDGPPYANGQIHMGHAVNKILKDMIVKARQLSGFDAAYIPGWDCHGLPIENAIEKQ 119

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                        +       +DQ   +F+ +  + D  +D   RT +  +       +K
Sbjct: 120 FGRCLPRDEMQAKSRAYATAQIDQQRTDFKRLGVLGD--WDHPYRTMDFVNEAAEIRAFK 177

Query: 112 KISDKGDIYKG 122
           ++ ++G +Y+G
Sbjct: 178 RVIERGFVYRG 188


>gi|253997805|ref|YP_003049868.1| valyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984484|gb|ACT49341.1| valyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 948

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 16/121 (13%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL- 297
           +D  + +  ++ P+ + V G DI+ F    W A +      L+  +P  K V+ HG I  
Sbjct: 491 VDAANQALQQYLPSSVLVTGFDIIFF----WVARMVMMTTHLTGKIPF-KHVYVHGLIRD 545

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+K+SKS GNV+DPI++I+ + +DA    L+++   G     D + ++KR   +   G
Sbjct: 546 AEGQKMSKSKGNVLDPIDLIDGIDLDA----LIKKRTTGLMNPKDAEKIEKRTRKEFPEG 601

Query: 358 I 358
           I
Sbjct: 602 I 602



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GH +   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 61  HMGHGFNQTIMDALTRYHRMRGDNTLWQPGTD-----------HAGIATQIVVERQ 105


>gi|171920420|ref|ZP_02931738.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|186701743|ref|ZP_02971430.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|171902863|gb|EDT49152.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|186701013|gb|EDU19295.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 806

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKR 101
                   F  QN + FR    ++  D  YD  + TT+ +
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQ 130



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 65/257 (25%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           AK+ P D+++ G++    H +Y   W  FL    +   K    KV + G IL    EK+S
Sbjct: 523 AKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVSTKEPFYKVINQGMILGENNEKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNA--DLAN 356
           KS GNVI+P E+I   G D LR +      L   +    DG    D ++K ++    L +
Sbjct: 583 KSKGNVINPDEIIASHGADTLRIYEMFMGPLTASLPWSPDGL---DAMRKWLDRVYRLYH 639

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +  L       ++KD + +          +E I+     +++   + +  Q  + A+++
Sbjct: 640 NLSEL------EVVKDVNKL----------NEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLY----VTVEVIRQLAILLQAFVPKLANK 472
           ++  V+                        VLY    +  E++    ILL  F P LA +
Sbjct: 684 MMVFVN------------------------VLYKNKVINYELLDNFLILLSCFAPHLAEE 719

Query: 473 IFDILFVADENRCFQSL 489
           ++ +     E+ C Q +
Sbjct: 720 LYSL--NHSESVCLQKM 734


>gi|170049395|ref|XP_001855875.1| valyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871251|gb|EDS34634.1| valyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1038

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 13/123 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +  G+ DN D  K  F+P  L   G DIL F     +++   LL   
Sbjct: 561 VLDTWFSSGLFPFSVFGWPDNTDDLKL-FYPTSLLETGHDILFFWVARMVFFGQTLL-GK 618

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACG 336
           LP  K+VF H  +    G K+SKSLGNVIDP++VI  + ++ L   L+      REI   
Sbjct: 619 LPF-KEVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLEGLHQQLLDSNLDPREIDKA 677

Query: 337 KDG 339
           K G
Sbjct: 678 KAG 680


>gi|83816700|ref|YP_445066.1| leucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|123753431|sp|Q2S415|SYL_SALRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83758094|gb|ABC46207.1| leucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 863

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++E+ Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 31  DQEEFYVLDMFPYPSGSGLHVGHPEGYTATDIVARYKRKQGFNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       +   ++N   F+     L  SYD    I TT+  ++   + ++ ++ +KG  
Sbjct: 91  ALKTNTHPRETTEKNIAQFKRQLKRLGFSYDWQREINTTDPDYYKWTQWIFLQLYEKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLL 177
           Y+     W+         ++EV  G ++   Y  +  P+ QW+       +++ Y D+LL
Sbjct: 151 YQSEEPVWWCEELGTVLANEEVIDGKSERGGYPCERVPMRQWV------LKITEYADRLL 204

Query: 178 SYYE 181
              E
Sbjct: 205 EGLE 208



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 31/176 (17%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +  K+SKS GNVI+P +V++E G D LR + +      +D  +  D ++         G+
Sbjct: 632 RSHKMSKSRGNVINPDDVVDEYGADTLRLYEMFMGPLEQDKPWSTDDME---------GV 682

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R   +++    G +    +  E D   L    R ++ + E+++ +  + A+A ++
Sbjct: 683 HRFLNRIWRLVVDADSGGLAV--SDEEPDREQLRTLHRTIKTVTEDIEARDFNTAIAAMM 740

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  +++ DA                   +  +V     +LL  F P LA +++
Sbjct: 741 EFVNAANKW-DA-------------------LPRQVATPFVLLLSPFAPHLAEELW 776


>gi|326571514|gb|EGE21529.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 1095

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV-- 310
           PADL++ G D  R    +  + L+S ++   P  K+V +HGF +  KG K+SKS GN   
Sbjct: 727 PADLYLEGSDQHR--GWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKGNTKG 784

Query: 311 IDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            +P ++  ++GVD LR ++       E+A  K+GF     + +R+              +
Sbjct: 785 FEPSDIANKMGVDILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIR------------NT 832

Query: 366 VSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  +L + D   P     +       D+ IL     + QEI +   +   H+    V+  
Sbjct: 833 IRFLLANTDDFDPKTDMVSTDKLISLDKYILYRTKHIQQEIIQAYHSMDFHQVCQTVMGF 892

Query: 421 VSE 423
            S+
Sbjct: 893 CSQ 895



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q H+GH    ++ D++ ++  LDG D  +  G D HG        QKI K  Q   
Sbjct: 63  YANGQIHLGHVVNKVLKDIIIKYKTLDGYDAPYVPGWDCHGLPIEQKVEQKIGKVGQKVN 122

Query: 67  VT 68
            T
Sbjct: 123 AT 124


>gi|303233928|ref|ZP_07320577.1| leucine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494853|gb|EFL54610.1| leucine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 802

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++ Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKKRFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  +V  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEVVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            YK       C S    L +E   N      G  GQ      N  QWM       +++ Y
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGHCERCG--GQVVRKVKN--QWM------LKITEY 198

Query: 173 QDKLL 177
            D+L+
Sbjct: 199 ADRLI 203



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 26/177 (14%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEKISKSLG 308
           P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+SKS G
Sbjct: 528 PVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYMKRTSHGMILGDNNEKMSKSRG 587

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P +++ + G D LR + +      K   + ++G+K            + V R+  +
Sbjct: 588 NVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENGVKG------CRKFLDKVWRTQEL 641

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +  D             + E + ++  + ++++ E+ +N   + A+AQ+++L++E +
Sbjct: 642 VDGD------------SNFEKMETLIHQTIKKVSEDYENLKFNTAIAQLMTLLNEFN 686


>gi|189462468|ref|ZP_03011253.1| hypothetical protein BACCOP_03157 [Bacteroides coprocola DSM 17136]
 gi|189430629|gb|EDU99613.1| hypothetical protein BACCOP_03157 [Bacteroides coprocola DSM 17136]
          Length = 880

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   + K++ P    V G DI+ F    W A ++ A      ++P  K V+  G + 
Sbjct: 474 INNPGNEEIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYMGDMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D
Sbjct: 529 DKIGRKMSKSLGNSPDPLDLIEQYGADGVRMGMMLSAPAGNDILFD 574


>gi|60683783|ref|YP_213927.1| leucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313170|sp|Q5L7B4|SYL_BACFN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|60495217|emb|CAH10038.1| putative Leucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 943

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              G    +    N   +R+  D +  S+D    IRT +  ++
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYY 132



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 112/273 (41%), Gaps = 46/273 (16%)

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYL------TTTGYLDNPDGSKAKFWPADLHVIGKD 266
           DWGI + ++P  + +    I   +N++       T   L+  D  +      D++++  D
Sbjct: 624 DWGISVAEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLNLKDQYEVTPIHVDVNIVSND 683

Query: 267 ILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           IL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E+ G D L
Sbjct: 684 ILDLEAFKAWRPEYETAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIVEKYGADTL 740

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFT 384
           R + +      +   +D +G+         +G+   + +  S+   ++ + ++    A  
Sbjct: 741 RMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFYDRNGEYLVKDEPATK 791

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E  +++  +  +V  +I +   N  +   +  V  L S               K N    
Sbjct: 792 EELKALHKLIKKVTGDIEQFSYNTSVSAFMICVNELSS--------------LKCNKK-- 835

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   EV+ QL ++L  F P +  +++D L
Sbjct: 836 --------EVLEQLIVVLAPFAPHVCEELWDTL 860


>gi|298207491|ref|YP_003715670.1| leucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850127|gb|EAP87995.1| leucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 944

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 30  EKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTE 99
           A   G   ++  ++N + +R   D +  S+D    +RT+E
Sbjct: 90  AIQTGQHPRITTEENIKTYRRQLDQIGFSFDWSRELRTSE 129


>gi|67469347|ref|XP_650652.1| valyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56467298|gb|EAL45265.1| valyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 1050

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 36/231 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           I++  DP  ++  W  +     +  G+   P+ +K   K++P +L   G DI+ F    W
Sbjct: 569 IELKQDPD-VLDTWFSSGLFPFSVMGW---PEQTKDLEKYFPGELLETGNDIIFF----W 620

Query: 276 PAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++  +L L      K+V  H  +   +G K+SKSLGN+IDPI+VIE + +  L   L
Sbjct: 621 VARMVMMSLELMDCLPFKEVLFHSIVRDAQGRKMSKSLGNIIDPIDVIEGISLKGLNDKL 680

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  K+     +G KK    D  NGI    + ++   L  Y          T+  + 
Sbjct: 681 YTYNLPEKECVIAAEGQKK----DFPNGIEECGTDAMRFALLAY---------MTQGHDI 727

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            L + +RV+     N  N+L +      ++   +    F AQ+ +E+KKTN
Sbjct: 728 NLDI-NRVVG--YRNFCNKLWNAFKFSTMNFRKD----FKAQETFEIKKTN 771



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 13/66 (19%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN   + H+GHA    I D + R+HR+ G + L+  G D           +AG+ T
Sbjct: 129 VIPPPNVTGKLHLGHALTNSIQDTIVRYHRMKGDETLWVPGVD-----------HAGIAT 177

Query: 70  KVFVDQ 75
           +V V++
Sbjct: 178 QVVVEK 183


>gi|257465710|ref|ZP_05630081.1| isoleucyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451370|gb|EEV25413.1| isoleucyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVQQRPEFNGNSA-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N     +V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVILPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G+   R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGDTYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +S       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|253564604|ref|ZP_04842061.1| leucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251948380|gb|EES88662.1| leucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301165367|emb|CBW24939.1| putative Leucyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 943

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              G    +    N   +R+  D +  S+D    IRT +  ++
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYY 132



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 54/276 (19%), Positives = 116/276 (42%), Gaps = 52/276 (18%)

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYL------TTTGYLDNPDGSKAKFWPADLHVIGKD 266
           DWGI + ++P  + +    I   +N++       T   L+  D  +      D++++  D
Sbjct: 624 DWGISVAEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLNLKDQYEVTPIHVDVNIVSND 683

Query: 267 ILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           IL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E+ G D L
Sbjct: 684 ILDLEAFKAWRPEYETAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIVEKYGADTL 740

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R + +      +   +D +G+         +G+   + +  S+    YD      G +  
Sbjct: 741 RMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLF---YD----RNGEYLV 784

Query: 386 SDESI----LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            DE      L    ++++++  +++    + +++  +  V+E+                 
Sbjct: 785 KDEPATKEELKALHKLIKKVTGDIEQFSYNTSVSAFMICVNEL----------------- 827

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              S++     EV+ QL ++L  F P +  +++D L
Sbjct: 828 ---SSLKCNKKEVLEQLIVVLAPFAPHVCEELWDTL 860


>gi|256375306|ref|YP_003098966.1| valyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919609|gb|ACU35120.1| valyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 877

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFILHK-GEKISKSLG 308
           AKF+P  +   G DIL F  +    F L A     P    VF HG I    G+K+SKS G
Sbjct: 476 AKFYPTSVLSTGYDILFFWVVRMMMFGLYAMDGKQPF-DHVFLHGLIRDAHGKKMSKSRG 534

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           N IDP++ ++  G DA R+ L+R    G D
Sbjct: 535 NGIDPLDWMDSYGADATRFTLLRGANPGSD 564



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 22/125 (17%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV----- 71
           N   H+GHA    + D L+R  R+ G +VL+  GTD  G     A + A  +  V     
Sbjct: 57  NGSLHMGHALNHSVMDALSRRRRMQGYEVLWLPGTDHAGIATQTAVERALASEGVSRHDL 116

Query: 72  ----FVDQ--------NSR---NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
               FV++          R     R + D +D S   F  T ++    + + ++KK+ D 
Sbjct: 117 GREKFVERVWEWREEVGGRILGQMRRLGDGVDWSRVRF--TMDEGLSRSVQTIFKKLFDD 174

Query: 117 GDIYK 121
           G IY+
Sbjct: 175 GLIYR 179


>gi|254459132|ref|ZP_05072554.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084025|gb|EDZ61315.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 466

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 130/330 (39%), Gaps = 55/330 (16%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  LY+     Y ++  H+GHA   ++ D+L+R  + +G DV +     +   KI K A 
Sbjct: 21  KASLYVCGPTVYDDS--HLGHAKSALVFDLLSRVLKANGYDVTYARNITDIDDKIIKKAA 78

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G   K   D  +  F    D + +S  D I        D    L +K+ D G  YK  
Sbjct: 79  ESGKDIKEITDFYTDAFHKEMDAIGVSRPD-IEPKATESLDAMYELIQKLIDSGHAYK-- 135

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                +   + Y++       +DG+Y +                R+    DKL     S 
Sbjct: 136 -----TSEGDIYFD-----TSSDGEYLSLSS-------------RVQDEDDKLQRVENS- 171

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WGIKIPDDPQYIMYVWIDALTNYLTT 241
                 +++RN     +   +KD ++   TF+  +G   P         W      +L  
Sbjct: 172 ------LQKRNPADFALWKSVKDNTI---TFNSPFGEGRPG--------W------HLEC 208

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHKG 300
           +  ++     +   +  D+H  G D+L  H     A    A N  L      +GF+   G
Sbjct: 209 SAMIEKHLAHEGAEFAVDIHGGGADLLFPHHENEAAQTRCATNHALANYWMHNGFVNIDG 268

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           EK+SKSLGN     + ++E   + LR++L+
Sbjct: 269 EKMSKSLGNSFFLKDALKEYDGEVLRFYLL 298


>gi|169632048|ref|YP_001705784.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169150840|emb|CAO99443.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 945

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 23/159 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +   G K+SKSLGN I  
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY-KALLTHGFTVDENGRKLSKSLGNYIPL 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            E+I+++G D LR ++       EIA  K+ F       +R+              ++  
Sbjct: 626 EEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIR------------NTLRF 673

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + +G+ P+  A    D  ++++   +LQ   E  Q 
Sbjct: 674 LLANLNGLKPSTDALAVDD--LIALDQYILQRANEVQQT 710



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|57167771|ref|ZP_00366911.1| valyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305432205|ref|ZP_07401369.1| valine--tRNA ligase [Campylobacter coli JV20]
 gi|57020893|gb|EAL57557.1| valyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304444748|gb|EFM37397.1| valine--tRNA ligase [Campylobacter coli JV20]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 10/91 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL--SANL--PLP-KKVFSHGFIL-HKGEKISKSL 307
           +F+P  L + G DIL F    W A ++  S N    LP K ++ H  +   +G K+SKSL
Sbjct: 477 EFYPNSLLITGFDILFF----WVARMMFQSTNALGALPFKDIYLHALVKDEQGRKMSKSL 532

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP E I+E   D LR+ L      G+D
Sbjct: 533 GNVIDPNESIKEYSADILRFTLALLAIQGRD 563



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|313672434|ref|YP_004050545.1| leucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939190|gb|ADR18382.1| leucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 852

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y      YP+ + H+GH     I DV++R+  + G +V+   G D  G     AA 
Sbjct: 30  KPKYYCLEMFPYPSGKIHMGHVRNYAIGDVISRYKFMKGFNVIHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +    +   N  N +     + +SY  D  + T +  ++   ++++ ++ +KG +Y 
Sbjct: 90  KNKIHPAKWTYSNIENMKMQLKKMGLSYDWDREVATCDPEYYKWEQMIFLQMYEKGLVYR 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY- 179
           K     W +       N+    +  DG+ +    + V+  E   ++F+++ Y ++LL + 
Sbjct: 150 KKSLQNWCNDCHTVLANE----QVEDGRCWRC-GDIVEKKEINSWYFKITDYAEELLDWT 204

Query: 180 --YESHPEFILPIER 192
                 PE +L ++R
Sbjct: 205 YKLPGWPEKVLVMQR 219



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 85/176 (48%), Gaps = 17/176 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP  +I E G D  R F +      KD  +++ G++          +  
Sbjct: 609 EKMSKSKKNVVDPDNLINEYGADTARLFSLFASPPEKDLEWNEQGVEGSFR--FLGRVWR 666

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ +++++  ++    +   G  ++  + IL      ++++  +++   ++ A+A ++  
Sbjct: 667 LIHKNIALFSEE----LSDNGEESKVSKDILYYMHSAIKKVTLDIEKYQLNTAVAAIMEY 722

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +    + Q      KT+ +R     Y+  E +R L ILL  F P ++ +++++
Sbjct: 723 SNNLSD-IEPQ-----IKTDKER-----YLFREALRSLIILLAPFTPHISEELWNV 767


>gi|283954345|ref|ZP_06371866.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794144|gb|EFC32892.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 746

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 318 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSKNDLKDFYPNSLLITGFDILFF----WVA 372

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 373 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSTDILRFTLAL 432

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 433 LAIQGRDIKLSNDKL 447


>gi|239503748|ref|ZP_04663058.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 945

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+              ++  +L + +G  P+  A    D  ++++   +LQ  
Sbjct: 659 RVSDSYRRIR------------NTLRFLLANLNGFKPSTDALAVDD--LIALDQYILQRA 704

Query: 402 RENMQN 407
            E  Q 
Sbjct: 705 NEVQQT 710



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|163739858|ref|ZP_02147265.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161386892|gb|EDQ11254.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 868

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 8/179 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHSVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T ++ ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYANIGTMVEQMKPLGLSLDWSRMFATCDESYYGQQQALFLDFLEKGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  +      N  E  +G  G    A    V+  E   +FF++S Y D+LL+
Sbjct: 150 RKNAVVNWDPVDMTVLAN--EQVEGGRGWRSGAL---VERRELTQWFFKISDYSDELLT 203



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 29/174 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 639 KMSKSKNNVVDPLHIISSYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 696

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M            GA    DE +L    + ++++  +++    + A+A++ S  
Sbjct: 697 CDRIGEM----------NSGASGNGDEDLLREMHKAIRDVTLSIETFGFNAAIAKLYSFT 746

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + + +                +A T      + I  LA L+    P LA  I++
Sbjct: 747 NTLAK---------------SKAGTA--AQKQAIMTLAQLMSPMTPHLAEDIWN 783


>gi|21282805|ref|NP_645893.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486033|ref|YP_043254.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|39932218|sp|Q8NX29|SYI_STAAW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81649443|sp|Q6GA19|SYI_STAAS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21204243|dbj|BAB94941.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244476|emb|CAG42904.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 917

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 35/286 (12%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R + V       D     +
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLW-VSSTDYLADVRISDE 636

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK+   +D+   I N    ++  +L + +   P   + TES+  +L V   +L  +RE 
Sbjct: 637 ILKQ--TSDVYRKIRN----TLRFMLGNINDFNPDTDSITESE--LLEVDRYLLNRLREF 688

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             + + +      +++  EV  + +     EL     D    +LY+
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINV----ELSNFYLDYGKDILYI 730



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|23016029|ref|ZP_00055790.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 866

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 11/190 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 43  KPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGFNVLHPMGWDAFGLPAENAAI 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
           +  V    +  +N    R+    + +SYD    + T E +++   + ++      G +Y 
Sbjct: 103 SNNVHPAKWTRENIAAMREQLKSMGLSYDWRREVATCEPQYYRHEQKMFLDFLKNGLVYR 162

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K  +  W  + +    N+  +    DG  + +     + +  + +F +++AY   L   L
Sbjct: 163 KESWVNWDPVENTVLANEQVI----DGHGWRSGALVEKRLLSQ-WFLKITAYAQDLLDSL 217

Query: 178 SYYESHPEFI 187
           +  E  PE +
Sbjct: 218 ATLERWPERV 227


>gi|328477975|gb|EGF47892.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 47

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL 46
          M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV 
Sbjct: 1  MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVF 46


>gi|304413512|ref|ZP_07394985.1| leucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284355|gb|EFL92748.1| leucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 873

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 15/214 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV++R+  + G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQLMLGKNVLQPMGWDAFGLPAESAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +    +L  SY  D  I T +  ++   +  + ++  KG  YK
Sbjct: 92  KNNTVPAPWTYENIDYMKKQLQLLGFSYDWDREIATCKPDYYHWEQWFFTQLYQKGMAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY---QDKLLS 178
              +  +   D     +++V    DG  +    + V+  E   +F +++AY       L 
Sbjct: 152 KTSAVNWCPHDRTILANEQVI---DGCCWRCD-SKVERKEIPQWFIKITAYADQLLDDLD 207

Query: 179 YYESHPEFILPIER----RNE--VISFVKSGLKD 206
             ES PE +  ++R    R+E   ISF   G+K+
Sbjct: 208 KLESWPEQVKTMQRNWIGRSEGVEISFDVVGMKE 241


>gi|294339967|emb|CAZ88330.1| isoleucine tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Thiomonas sp. 3As]
          Length = 959

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 5/107 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T + TT     +     A+   ADL++ G D  R  FH+    +  +    
Sbjct: 563 ILEVWFDSGTTH-TTVLMGSHAGAGHAEGPQADLYLEGHDQHRGWFHSSLLTSCAMYGRA 621

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + +HGF +  +G K+SKSLGN IDP++   ++G + +R ++ 
Sbjct: 622 PY-KGLLTHGFTVDSQGRKMSKSLGNGIDPLQTCNKLGAEIIRLWVA 667



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 16/131 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
           K  +     Y N Q H+GHA   I+ D++ +  +L G D  +  G D HG  I  A +  
Sbjct: 60  KFVLHDGPPYANGQIHMGHAVNKILKDMIVKARQLSGFDAAYIPGWDCHGLPIENAIEKQ 119

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                        +       +DQ   +F+ +  + D  +D   RT +  +       +K
Sbjct: 120 FGRCLPRDEMQAKSRAYATAQIDQQRTDFKRLGVLGD--WDHPYRTMDFVNEAAEIRAFK 177

Query: 112 KISDKGDIYKG 122
           ++ ++G +Y+G
Sbjct: 178 RVIERGFVYRG 188


>gi|288925765|ref|ZP_06419696.1| isoleucine--tRNA ligase [Prevotella buccae D17]
 gi|288337420|gb|EFC75775.1| isoleucine--tRNA ligase [Prevotella buccae D17]
          Length = 1129

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 40/269 (14%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           KF+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNV
Sbjct: 634 KFYPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHVGNV 692

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRSVS 367
            DP E+I + G D +R++++       +  +D +G   ++++    L N      + S  
Sbjct: 693 TDPFEMIGKYGADPVRFYMMTNSEPWDNLKFDPNGVDEVRRKFFGTLYN------TYSFF 746

Query: 368 MILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +  + D   P           E D  ILS  S +++E+   ++N    RA   + + V+
Sbjct: 747 ALYANVDNFDPEASQVDLAKRPEIDRWILSCLSTLVKEVETELENFDPTRAGRLIDNFVN 806

Query: 423 -EVDRYF---DAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIF-- 474
            ++  ++   + ++ W  K+ + D+ S    LY  +  + +   L+  F P  A++++  
Sbjct: 807 DDLSNWYVRLNRKRFWG-KEMSEDKLSAYQTLYTCLMTVSK---LIAPFAPFFADQLYHD 862

Query: 475 ----------DILFVADENRCFQSLDQRL 493
                     D   VADE    + L+ R+
Sbjct: 863 LGGKMESVHLDYFPVADEAIVDKDLEVRM 891


>gi|283957243|ref|ZP_06374704.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791255|gb|EFC30063.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|311741282|ref|ZP_07715106.1| valine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303452|gb|EFQ79531.1| valine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 913

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 20/133 (15%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDIL-----------RF 270
           DP  ++  W  +     +T G+ +  PD    KF+P ++ V   DIL            F
Sbjct: 469 DPD-VLDTWFSSALWPFSTLGWPEKTPD--LEKFYPTNVLVTAYDILFFWVARMMMFGTF 525

Query: 271 HAIYWPAFLLSANLPLP----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
              + P  L       P    K ++ HG +   +G K+SKSLGN IDP++ + + G DAL
Sbjct: 526 AGSHTPELLGEGTDGRPQVPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADAL 585

Query: 326 RYFLVREIACGKD 338
           R+ L R    G D
Sbjct: 586 RFTLARGANPGVD 598


>gi|224024452|ref|ZP_03642818.1| hypothetical protein BACCOPRO_01177 [Bacteroides coprophilus DSM
           18228]
 gi|224017674|gb|EEF75686.1| hypothetical protein BACCOPRO_01177 [Bacteroides coprophilus DSM
           18228]
          Length = 1162

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           ++PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LG
Sbjct: 661 YYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAY----KNVISNGLVLDKNGNKMSKRLG 716

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           N +DP   IE+ G D LR++++   +   +  +D DG+
Sbjct: 717 NAVDPFGTIEKFGSDPLRWYMITNSSPWDNLKFDVDGV 754


>gi|205356743|ref|ZP_03223503.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345382|gb|EDZ32025.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|150864552|ref|XP_001383414.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
 gi|149385808|gb|ABN65385.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
          Length = 863

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 54/127 (42%), Gaps = 8/127 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH     I+DV+ARF RL G +V+   G D  G     AA   GV      D
Sbjct: 4   YPSGILHLGHTRVYTISDVIARFKRLKGYNVIHPMGWDAFGLPAENAAVERGVNP---AD 60

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
              RN   M + +D    DF      R   TC   + K + K  I+   +    + R EA
Sbjct: 61  WTERNIDKMKEQIDFMLADF---DWDREVTTCSPDYYKWTQK--IFLLLFENGLAYRKEA 115

Query: 135 YYNDDEV 141
             N D V
Sbjct: 116 QINWDPV 122


>gi|148926943|ref|ZP_01810620.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845027|gb|EDK22124.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|296533435|ref|ZP_06896019.1| leucine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296266241|gb|EFH12282.1| leucine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 860

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 12/179 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA+
Sbjct: 39  KPKYYVLEMFPYPSGKIHMGHVRNYTLGDVVARYKRARGFQVLHPMGWDAFGLPAENAAR 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADV----LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G     +  QN  N R  A++    L I +D    T +  ++   + L+ +    G +
Sbjct: 99  ERGTHPAAWTYQNIANMR--AELKRMGLSIEWDREFATCDPAYYGQQQKLFLQFLKGGLV 156

Query: 120 -YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             K  +  W  +      N+  +    DG+ + +   PV+  +   +FF ++ +  +LL
Sbjct: 157 ERKESWVNWDPVDHTVLANEQVI----DGRGWRS-GAPVEKKKLSQWFFSITKFAPQLL 210



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 24/181 (13%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + + +K+SKS  N IDP  +I+  G D  R+F++ +    +D  + + G+         +
Sbjct: 620 VSRNDKMSKSKRNTIDPGAIIDHYGADTARWFILSDNPPERDMEWTESGV---------S 670

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G      R +  ++    G +P PG  TE  E      +R L+        +  HR +A 
Sbjct: 671 GASRFTQR-LWRLVNGAAGTLPAPG--TEPAEG----AARDLR--------RATHRTIAA 715

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V   +          +  E                 E +  +A L+   +P LA +++ +
Sbjct: 716 VTEALETFSFNVAVARIHEFANAIEAAGEADGAARREALEAVARLVSPMMPHLAEELWSL 775

Query: 477 L 477
           L
Sbjct: 776 L 776


>gi|295689026|ref|YP_003592719.1| valyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430929|gb|ADG10101.1| valyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 907

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +      AKF+P    V G DI+ F    W A ++   +  
Sbjct: 472 VLDTWFSSALWPFSTLGWPEK-TADLAKFYPTSTLVTGFDIIFF----WVARMMMMGIHF 526

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               P  K+VF +  +   KG K+SKS GNV+DP+ +I+E+G DA+R+ L       +D
Sbjct: 527 MGEAPF-KQVFINALVRDEKGAKMSKSKGNVMDPLILIDELGCDAVRFTLTAMSGQARD 584



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 31/95 (32%)

Query: 16  PNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           PNA+P              HIGHA    + DVL RFHR+ G   L+  GTD         
Sbjct: 31  PNAEPFVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTD--------- 81

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             +AG+ T++ V+      R +A   +I   D  R
Sbjct: 82  --HAGIATQMVVE------RQLAAAGNIGRRDMGR 108


>gi|227512214|ref|ZP_03942263.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084608|gb|EEI19920.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 942

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  +S   
Sbjct: 534 IMDVWFDSGSSHQGVLAA--RPELT----YPADMYLEGSDQYRGWFNSSLITSVAVSNKA 587

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF L  KG K+SKSLGN I PI++I+++G + +R ++ 
Sbjct: 588 PY-KSIVSQGFTLDGKGHKMSKSLGNTIAPIDIIKKMGAEIVRLWVT 633



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 65  YANGDIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYDRK---K 121

Query: 75  QNSRNFRDMA 84
            ++ +FR + 
Sbjct: 122 MSTNDFRKLC 131


>gi|157415046|ref|YP_001482302.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386010|gb|ABV52325.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747687|gb|ADN90957.1| Valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSENDLEDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|48428670|sp|Q970Z6|SYL2_SULTO RecName: Full=Leucyl-tRNA synthetase 2; AltName:
          Full=Leucine--tRNA ligase 2; Short=LeuRS 2
          Length = 944

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 35/73 (47%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          + R K + + A  YPN+  H+GH    +  D+ AR+ R+ G +VLF  G    G  I   
Sbjct: 24 RTRNKFFTTVAFPYPNSPFHLGHGRTYVTCDIYARYMRMKGYNVLFPMGFHYTGTPIIAM 83

Query: 62 AQNAGVTTKVFVD 74
          A +     K  +D
Sbjct: 84 ADDVAKGDKELID 96



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 31/227 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H  ++  F  +A  P    PK +  +GF+L++G+K+SKSL N+I
Sbjct: 572 WYPLDIRHSGKDLIPNHLSFF-IFNHAAIFPEELWPKAIAVNGFVLYEGKKMSKSLRNII 630

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMI- 369
              + +     D +R  L      G D  F D            A  +G ++ R    I 
Sbjct: 631 PLRKALRIYSPDVVRIALTSTADMGSDVNFSD----------SYAKSVGEILRRYYEFIK 680

Query: 370 -LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRY 427
            L  YDG     G+   ++     V S VL   + NM N      +  ++ S  S +  Y
Sbjct: 681 ELPKYDG----EGSEFANNWLKAQVSSIVLSSTK-NMDNIDFRSTINDILYSFDSYLREY 735

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D  K         D       +  EVI     LL  F P  A +I+
Sbjct: 736 IDMCK--------ADGKEPNGKLLREVIETWIKLLAPFAPHFAEEIW 774


>gi|86153201|ref|ZP_01071405.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613655|ref|YP_001000464.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85842927|gb|EAQ60138.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249321|gb|EAQ72281.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|302551360|ref|ZP_07303702.1| leucyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302468978|gb|EFL32071.1| leucyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 962

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 61  RPKKFIMDMFPYPSGAGLHVGHPLGYIATDVFARFQRMTGHNVLHTLGFDAFGLPAEQYA 120

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N +     L + +D
Sbjct: 121 VQTGTHPRVSTEANMENMKSQLRRLGLGHD 150


>gi|296134649|ref|YP_003641891.1| leucyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295794771|gb|ADG29561.1| leucyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 876

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  EK Y  + + YP+ + H+GH     I D+L R  R++G +VL   G D  G     A
Sbjct: 30  KPGEKFYACSMLPYPSGKLHMGHVRNYTINDMLTRHLRMNGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A    V    +   N     R  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 90  AMKNKVPPAKWTYDNIAYMKRQMQAMGLAIDWSRE--VATCSPEYYKWNQWLFLKMLEKG 147

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +      +   D+    +++V    DG+ + +    V+  E  GY+ +++ Y ++LL
Sbjct: 148 IAERRTQVVNWDPVDQTVLANEQVI---DGRGWRSG-AVVEKREIPGYYLKITDYAEELL 203

Query: 178 S 178
           +
Sbjct: 204 A 204


>gi|227524054|ref|ZP_03954103.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088793|gb|EEI24105.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 942

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  +S   
Sbjct: 534 IMDVWFDSGSSHQGVLAA--RPELT----YPADMYLEGSDQYRGWFNSSLITSVAVSNKA 587

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF L  KG K+SKSLGN I PI++I+++G + +R ++ 
Sbjct: 588 PY-KSIVSQGFTLDGKGHKMSKSLGNTIAPIDIIKKMGAEIVRLWVT 633



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 65  YANGDIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYDRK---K 121

Query: 75  QNSRNFRDMA 84
            ++ +FR + 
Sbjct: 122 MSTNDFRKLC 131


>gi|208435292|ref|YP_002266958.1| isoleucyl-tRNA synthetase [Helicobacter pylori G27]
 gi|254782410|sp|B5Z943|SYI_HELPG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|208433221|gb|ACI28092.1| isoleucyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 920

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 57/308 (18%)

Query: 60  KAAQNAGVTTKVFVDQN---SRNFRDMADVLDISYDDFIRTTEKRH-HDTCRILWKKISD 115
           K   N G+  K  +D++      F+    +++   D  +   E  H +  C   W+  + 
Sbjct: 351 KGCYNEGIIHKKLLDESYLGEHVFKAQKRIIEQLGDSLLLEQEIEHSYPHC---WR--TH 405

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           K  IY+   + W+ L DE +  +D    G+         N ++ +E     F  S+ +++
Sbjct: 406 KPVIYRAT-TQWFILMDEPFIQND----GSQKTLREVALNAIEKVE-----FVPSSGKNR 455

Query: 176 LLSYYESHPEFILP------------IERRNEVISFVKSGLKDLS--LSRKTFD--WGIK 219
           L +  E+ P++ L             I++R     F    L+ ++    +K  D  W   
Sbjct: 456 LKTMIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHVANLFEKKGCDVWWESS 515

Query: 220 IPD--DPQY------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           + D   P Y            I+ VW D+ + +      L++  G K +  P+D+ + G 
Sbjct: 516 VKDLLPPSYQEDSKHYEKVMHILDVWFDSGSTF---KAVLEDYYGEKGQS-PSDVILEGS 571

Query: 266 DILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           D  R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G 
Sbjct: 572 DQHRGWFQSSLLIGCVLNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGS 630

Query: 323 DALRYFLV 330
           D +R ++ 
Sbjct: 631 DVVRLWVA 638


>gi|225551776|ref|ZP_03772719.1| valyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371571|gb|EEH00998.1| valyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 875

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 22/277 (7%)

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           D SL  K    G +   DP  ++  W  +     ++ G+  N D     ++P +  +   
Sbjct: 430 DPSLDEKNM--GKRFVQDPD-VLDTWFSSWLWPFSSLGW-PNVDVDFKNYYPTNTLITAY 485

Query: 266 DILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEE 319
           DI+ F    W A ++ A L    +V F   +I       +G+K+SKSLGN IDP+++I  
Sbjct: 486 DIIFF----WVARMVMAGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIING 541

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D+LR+ L      G+D   + D       A  AN + N  S+ + + LK+ +  I  
Sbjct: 542 YGSDSLRFTLSFLSVQGQD--LNIDAKDFMFGAKFANKVFN-ASKFILLNLKNRE--ILN 596

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
              F + D+ +L+  +  +  +  +  N   + A   V         D Y +  K  +L 
Sbjct: 597 DLKFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLN 655

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             N D  +  +   +  +++  ++L  F+P +  KI+
Sbjct: 656 NENIDIQNMAISKLLFFLKKALLILHPFIPFVTEKIY 692



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ D+L R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDILVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD---KGDIYK 121
           +  ++F   D++     +  + L  SYD   R         C+ + K   D   KG IY+
Sbjct: 112 LVQEIFKLKDRHRGIIVNQINKLGASYDH-SRERFTLDESLCKAVNKVFKDLYFKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|184156362|ref|YP_001844701.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|183207956|gb|ACC55354.1| Isoleucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
          Length = 945

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+              ++  +L + +G  P+  A    D  ++++   +LQ  
Sbjct: 659 RVSDSYRRIR------------NTLRFLLANLNGFKPSTDALAVDD--LIALDQYILQRA 704

Query: 402 RENMQN 407
            E  Q 
Sbjct: 705 NEVQQT 710



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|156937015|ref|YP_001434811.1| valyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156565999|gb|ABU81404.1| valyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 792

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/302 (20%), Positives = 120/302 (39%), Gaps = 56/302 (18%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA-D 259
           K G ++    ++ FD               W+D+    L  T Y+ + +  K  F     
Sbjct: 446 KCGAREWEGEKRVFD--------------TWMDSSVTVLYITKYMRDEEFWKKTFLEGVK 491

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-----HKGEKISKSLGNVIDPI 314
           L   G DI+R    Y    LL  +    K+ F   FI       KG+K+SK  GNVI P 
Sbjct: 492 LRPQGYDIIRTWLYY---SLLRVHQLTGKRAFDLVFINGMGLDPKGKKMSKRYGNVIMPE 548

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E++ + G DA R+++  E+         K G   RV  +   G    +++ ++  +  Y 
Sbjct: 549 EILNKYGADATRFWIALEV---------KPGENYRVIENKIQGAQKFLTKFLN--VARYV 597

Query: 375 GMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV------------IS 419
              P P       E+D+ IL+  + +++++R+       H    +             I 
Sbjct: 598 SSFPYPEGRVELREADKWILAELAELIEKVRKAYAEMDFHTVAEEFYHFVWDKFSSHYIE 657

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L  +  R  D       ++ + + A    +    V++ L ++L    P +++ ++  L+ 
Sbjct: 658 LSKKRARMMD-------ERFDEEDAKAAWWTLHTVLKNLLLILAPISPAISDYLWRRLYS 710

Query: 480 AD 481
           ++
Sbjct: 711 SE 712


>gi|302338408|ref|YP_003803614.1| isoleucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635593|gb|ADK81020.1| isoleucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 1040

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 18/235 (7%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +PAD    G D  R    ++   +L+A L   P    V ++G +L + G+K+SKS  N
Sbjct: 544 KNFPADFICEGLDQTR--GWFYTLTILAAALFDSPAFMNVVTNGLVLAEDGKKMSKSERN 601

Query: 310 VIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             DP+EVI++ G DALR FL+   +   +D  Y  DG+K+ +   +   I    + S  +
Sbjct: 602 YSDPVEVIDKFGADALRMFLMNSAVVKAEDLRYSDDGVKEVLKTFI---IPFWNAYSFFV 658

Query: 369 ILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
              + D     P    E+     D  ILS    ++ ++   +    + +A+  ++  V  
Sbjct: 659 TYANIDSF--EPKGLKEAPDNPLDRWILSEAEHLVSDVTAQLDAYDLQKAIEPIVRFVDS 716

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
           ++ ++  +      K+  D      Y T+  V+ ++  +    +P +   I+  L
Sbjct: 717 LNNWYIRRSRRRFWKSENDSDKLQAYETLYAVLMKVVRVAAPIIPFMTEAIYQNL 771


>gi|301633567|gb|ADK87121.1| leucine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 793

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+A   H+GH     I DVL+R+H+  G +V+   G D  G    +
Sbjct: 27  KTKPKYYILDMFPYPSAAGLHLGHVRAYTITDVLSRYHKAKGFNVIHPIGFDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKG 117
            A  +      + D+N  NF +        YD    ++TT+ R++   + ++ ++ + G
Sbjct: 87  YAIASNKHPGDWTDKNITNFIEQLTAFGFDYDYQLSLKTTDPRYYQYTQWIFGQLFEAG 145



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 10/86 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKIS 304
           ++ P DL+V G +    H +Y   W  FL     ++   P  KK+ + G +L   G+K+S
Sbjct: 513 RYLPVDLYVGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPF-KKLINQGMVLGPDGKKMS 571

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLV 330
           KS GN I+P  +I+  G DALR +L+
Sbjct: 572 KSKGNTINPTPLIDSHGADALRLYLM 597


>gi|297208165|ref|ZP_06924595.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912243|ref|ZP_07129686.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296886904|gb|EFH25807.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886489|gb|EFK81691.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 920

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 35/286 (12%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 469 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 528

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 529 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 581

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R + V       D     +
Sbjct: 582 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLW-VSSTDYLADVRISDE 639

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK+   +D+   I N    ++  +L + +   P   + TES+  +L V   +L  +RE 
Sbjct: 640 ILKQ--TSDVYRKIRN----TLRFMLGNINDFNPDTDSITESE--LLEVDRYLLNRLREF 691

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             + + +      +++  EV  + +     EL     D    +LY+
Sbjct: 692 TASTINNYENFDYLNIYQEVQNFINV----ELSNFYLDYGKDILYI 733



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 48  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 108 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 164

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 165 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 201


>gi|269986163|gb|EEZ92476.1| isoleucyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 1024

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 20/265 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +M VWID+ +       Y  N +G + K++PAD    G D +R  F+++   
Sbjct: 517 RVPD----VMDVWIDSGSASFACIDYPANKEGFE-KYFPADFISEGNDQVRGWFYSLLVI 571

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIA 334
            ++ +  LP  K V  H FI+ + G K+SKS GN     E+I+E    DALR  L++   
Sbjct: 572 GYIATGQLPY-KNVSMHKFIVGEDGNKLSKSEGNYKPISELIKEGYSRDALRITLLKHNL 630

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                F   +        +L   +GNL   S    LK+  G           D+ I+S  
Sbjct: 631 EDVAVFTLNELKDDTKTINLFYNLGNLYV-SAKETLKNEKGQ---EINLRTEDKWIMSRW 686

Query: 395 SRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR-YFDAQKPWELKKTNPDRASTVLYVTV 452
           +R  + I+ ++ N     +L ++   LV+++ R Y    K     +   D   T      
Sbjct: 687 NRTKKLIQTDLDNFRTDLSLNKLTDFLVNDLSRTYIKLAKG----RMFDDSDYTAFKTFE 742

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            ++++L+I    F+P ++ K+F ++
Sbjct: 743 HILKELSIASSIFLPFISEKVFKMI 767


>gi|256832195|ref|YP_003160922.1| tRNA synthetase valyl/leucyl anticodon-binding [Jonesia
           denitrificans DSM 20603]
 gi|256685726|gb|ACV08619.1| tRNA synthetase valyl/leucyl anticodon-binding [Jonesia
           denitrificans DSM 20603]
          Length = 901

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +        G++ NPD  +  F P DL   G+DI+R   F  +   + L +  
Sbjct: 531 IMDTWATSSLTPHIAGGWISNPDLFRTVF-PMDLRPQGQDIIRTWLFSTVV-RSHLENDC 588

Query: 284 LPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           LP      S G+IL    +K+SKS GNV+ P+ ++E+ G DA+RY+              
Sbjct: 589 LPWRHAAIS-GWILDPDRKKMSKSKGNVVTPMGLLEQHGSDAVRYWAA------------ 635

Query: 343 KDGLKKRVNADLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 R+  D A  +G + + R +++ + +         A + SD+  +S+       +
Sbjct: 636 ----SARLGTDAAFEVGQMKIGRRLAIKILNASKF-----ALSFSDDGHISLDP---AHV 683

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            E +   ++  ALA+V+   +E    +D  +  EL +T
Sbjct: 684 SEPLDKAMLG-ALAEVVDRATEALNSYDHTRALELTET 720



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +  
Sbjct: 55  REQVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYQRMTGKNVFYPMGWDDNGLPTERRV 114

Query: 63  QN 64
           QN
Sbjct: 115 QN 116


>gi|227498594|ref|ZP_03928738.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904050|gb|EEH89968.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 934

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++     +           WPADL++ G D  R  F +    +   +   
Sbjct: 539 IMDVWFDSGSSHRAVLNHF------PGLTWPADLYLEGSDQHRGWFQSSLLTSVATTGKA 592

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + V +HG+ L  +G K+SKSLGN + P ++I++ G D +R ++
Sbjct: 593 PY-RAVLTHGYTLDGEGRKMSKSLGNTVAPQDIIKDYGADIVRLWV 637



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 28/58 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K  +     Y N + H+GHA   I+ D++ ++    G D  +T G D HG  I  A 
Sbjct: 53  KKFILHDGPPYANGKIHLGHALNKILKDIILKYKYARGFDTPYTPGWDTHGMPIEHAC 110


>gi|220936373|ref|YP_002515272.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782451|sp|B8GQR1|SYI_THISH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219997683|gb|ACL74285.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 937

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + T T      D       PADL++ G D  R  F +    +  +    P  
Sbjct: 533 VWFDSGVTHATVT------DKRAELGLPADLYLEGSDQHRGWFQSSLLTSVAMRGTAPY- 585

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K V +HGF +  +G+K+SKS GNV+ P +V++ +G D LR ++ 
Sbjct: 586 KAVLTHGFTVDAQGQKMSKSKGNVVAPQKVVDTLGADILRLWVA 629



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R +  ++    Y N   HIGHA   I+ D++ +   L G D  +  G D HG        
Sbjct: 48  RPRFVLADGPPYANGNIHIGHAVNKILKDIIVKSRTLAGFDAAYIPGWDCHGLPIELQVE 107

Query: 56  QKIAKAAQ--NAGVTTKVF-------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +KI K     +A    K         VD   ++F+ +  VL      ++    +   DT 
Sbjct: 108 KKIGKVGHEVDAAAFRKACREYALEQVDSQRQDFKRLG-VLGDWEKPYLTMDYQVEADTV 166

Query: 107 RILWKKISDKGDIYKG 122
           R L  +I ++G + KG
Sbjct: 167 RAL-GRIIERGHLMKG 181


>gi|254468063|ref|ZP_05081469.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086873|gb|EDZ64156.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 805

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           + +   YP+ + H+GH     I DV++RF R  G +V+   G D  G     AA      
Sbjct: 37  VLSMFPYPSGKLHMGHVRNYTIGDVISRFKRFQGFNVMQPMGWDAFGLPAENAAIKNNTL 96

Query: 69  TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              +  QN    ++  + L  S D    I T +  ++   + L+ K+  KG IYK     
Sbjct: 97  PDKWTYQNIDAMKEQLNSLGFSLDWSREIATCDPNYYKWEQWLFIKLFKKGLIYKKTSRV 156

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            +   D+    +++V    DG+ + +    V+  E   YFF+++ + ++L
Sbjct: 157 NWDPVDQTVLANEQV---IDGKGWRSGA-LVEQKEIPQYFFKITDFAEEL 202



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 10/88 (11%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A +W P D ++ G +    H +Y   F        L++ + P  + + + G +L  G K
Sbjct: 509 EANYWLPVDQYIGGIEHAILHLLYSRFFSRLLRDEGLINISEPF-RNLLTQGMVLKDGSK 567

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS GN +DP E+IE+ G D  R F++
Sbjct: 568 MSKSKGNTVDPGELIEKFGADTARLFIM 595


>gi|78777769|ref|YP_394084.1| leucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123768601|sp|Q30Q82|SYL_SULDN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78498309|gb|ABB44849.1| leucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 822

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI +   +P+ + H+GH     I+D  AR++R +G +VL   G D  G     AA 
Sbjct: 36  RGKKYILSMFPFPSGRLHMGHVRNYTISDAFARYYRQEGFNVLHPIGFDSFGMPAENAAI 95

Query: 64  NAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G   K +    +D     F+ +      S D  + T+++ +    +     + +KG +
Sbjct: 96  KNGSHPKKWTYDNIDYMKGEFKSLG--FSFSKDRELATSDELYTKFEQGFIIDMYEKGLL 153

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K  +  W         N+  +    DG  +    + V+  +   Y+F+++ Y D+LL+
Sbjct: 154 YRKKGFLNWCPSCHTVLANEQVI----DGSCWRCDSSVVK-KDMNQYYFKITQYGDELLA 208



 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+ + G +L  G K+SKS GN +DP  +IE+ G D  R F++
Sbjct: 577 KLLTQGMVLKDGAKMSKSKGNTVDPDAIIEKYGADTARLFIL 618


>gi|21672694|ref|NP_660761.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009349|sp|Q8K9B9|SYL_BUCAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21623335|gb|AAM67972.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 861

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 17/129 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y    + YP+ + H+GH     I+DV++R+ R+ G +VL   G D  G    +AA
Sbjct: 31  KKEKYYCLPMLPYPSGKLHMGHVRNYTISDVISRYQRMLGKNVLQPIGWDAFGLPAEEAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                    +  +N +  +     L  SYD        R   TC         K D Y  
Sbjct: 91  IKNKTKPSDWTQKNIKYMKKQLQSLGFSYD------WSREITTC---------KPDYY-- 133

Query: 123 CYSGWYSLR 131
           C+  W+ ++
Sbjct: 134 CWEQWFFIQ 142


>gi|86152076|ref|ZP_01070288.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840861|gb|EAQ58111.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSEKDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|310816228|ref|YP_003964192.1| isoleucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754963|gb|ADO42892.1| isoleucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 969

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 217 GIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FH 271
           GI  PDD + I   + VW D+ + +       D  DG   +   AD+++ G D  R  FH
Sbjct: 562 GIANPDDYRQIFDVLDVWFDSGSTHAFV--LRDRADGVPDQI--ADVYLEGTDQHRGWFH 617

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +            P  K V +HGF L  KG K+SKSLGN I P  VI++ G D LR ++ 
Sbjct: 618 SSLLQGSATIGRAPY-KNVVTHGFTLDEKGMKMSKSLGNTIVPQAVIDQYGADILRLWVA 676

Query: 331 R 331
           +
Sbjct: 677 Q 677



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 62  YANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPI 105


>gi|256822881|ref|YP_003146844.1| isoleucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796420|gb|ACV27076.1| isoleucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    A  +  + P  K   +HGF++  KGEK+SKS GNV+ P
Sbjct: 557 PADLYLEGSDQHRGWFQSSLLTATGMYGHAPY-KHCLTHGFVVDGKGEKMSKSKGNVMAP 615

Query: 314 IEVIEEVGVDALRYFL 329
            +VI ++G D LR ++
Sbjct: 616 NDVINKLGADVLRLWV 631



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           RE+  +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG        
Sbjct: 48  REQFILHDGPPYANGNIHIGHSVNKILKDIVVKSKTLSGFDSPYVPGWDCHGLPIENNVE 107

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +K+ KA   A V+   F  Q  R++   A  +D    DFIR
Sbjct: 108 KKVGKAG--AKVSHAEF-RQKCRDY--AAKQVDGQKTDFIR 143


>gi|255325490|ref|ZP_05366592.1| valine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297428|gb|EET76743.1| valine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 906

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 16/101 (15%)

Query: 254 KFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLP----KKVFSHGFIL- 297
           KF+P ++ V   DIL            F   + P  L       P    K ++ HG +  
Sbjct: 491 KFYPTNVLVTAYDILFFWVARMMMFGTFAGTHTPELLGEGTDGRPQVPFKDLYLHGLVRD 550

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +G K+SKSLGN IDP++ + + G DALR+ L R    G D
Sbjct: 551 EQGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGVD 591


>gi|218134173|ref|ZP_03462977.1| hypothetical protein BACPEC_02063 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991548|gb|EEC57554.1| hypothetical protein BACPEC_02063 [Bacteroides pectinophilus ATCC
           43243]
          Length = 815

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 51/242 (21%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHKGE---- 301
           K+ P D+++ G +    H +Y   +  FL     +  + P  KK+F+ G I  K +    
Sbjct: 525 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLHDIGVIDFDEPF-KKLFNQGMICKKPDDIEK 583

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS+GNV+ P  ++ + G D+LR + +       D  +D  G+         
Sbjct: 584 YGTKAMKMSKSMGNVVSPDTLVNDYGCDSLRMYELFVGPPETDAEWDDRGI--------- 634

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +G+   ++R  +++ ++    +P      E+DE     C+++  ++  ++  +L   +L 
Sbjct: 635 DGVRRFITRFWNLVHENAGKNVP------ETDE-----CTKLQHKMVHDITERLESFSLN 683

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            VIS   E +  F      EL K    +   +   T+E+   +  LL  F P +A ++++
Sbjct: 684 TVISGFMEYNNKFI-----ELAK----KQGGIDKKTLEI---MVTLLAPFAPHVAEELWE 731

Query: 476 IL 477
           +L
Sbjct: 732 VL 733



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 30  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKMLHGYYVIHPMGWDAFGLPAENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   GV  K+    N  N +     +   YD
Sbjct: 90  AIKTGVHPKISTASNVANIKRQIKEISAVYD 120


>gi|189485620|ref|YP_001956561.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287579|dbj|BAG14100.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 929

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 21/134 (15%)

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA 258
           +G K LS +  +F    K  +D   I+ VW D+  +Y   L++  Y D         +PA
Sbjct: 525 TGAKCLSCNSASF----KKEED---ILDVWFDSGVSYEAVLSSGNYKDLE-------YPA 570

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  F     P+  +    P  K V +HGF++  +G+K+SKS+GN++    
Sbjct: 571 DLYIEGSDQHRGWFQTSMIPSVAVKGKSPY-KNVLTHGFVVDGQGKKMSKSIGNIVSSDN 629

Query: 316 VIEEVGVDALRYFL 329
           +I + G D +R ++
Sbjct: 630 LINKYGADVVRLWI 643



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 33/74 (44%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++EK        Y NA  HIG     ++ D + ++  + G  V FT G D HG  I + 
Sbjct: 49  KDKEKFIFHDGPPYANANIHIGTGLNKVLKDFIIKYRSMSGNYVPFTPGWDCHGLPIEQL 108

Query: 62  AQNAGVTTKVFVDQ 75
                 T K  VD+
Sbjct: 109 VLKEMKTDKSKVDR 122


>gi|153952361|ref|YP_001398297.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939807|gb|ABS44548.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 870

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 20/135 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW---------PADLHVIGKDILRFHAIYWPA 277
           ++  W  +    ++T G+  N +  K K W         P  L + G DIL F    W A
Sbjct: 442 VLDTWFSSGLWAMSTLGW-GNENWGKDKIWSENDLKDFYPNSLLITGFDILFF----WVA 496

Query: 278 FLL----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++    +A   LP K ++ H  +   +G K+SKSLGNVIDP E I+E   D LR+ L  
Sbjct: 497 RMMFQSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLAL 556

Query: 332 EIACGKDGFYDKDGL 346
               G+D     D L
Sbjct: 557 LAIQGRDIKLSNDKL 571



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ R+ R+DG  VL+  G D  G
Sbjct: 49 HIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAG 83


>gi|261492878|ref|ZP_05989424.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496772|ref|ZP_05993147.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307611|gb|EEY08939.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311419|gb|EEY12576.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+ A     D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEQRPEFNGNLA-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G          +  V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TG----------EITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   ++       +I+E   N   H  + +++   S
Sbjct: 686 DRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|241068522|ref|XP_002408458.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492446|gb|EEC02087.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 819

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 28  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 87

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N  N +     +  SYD
Sbjct: 88  KNNSHPKDWTYSNIENMKKQLKSMGFSYD 116



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 36/199 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N+ID   + E+ G DA+R+F++ +    KD  +   G++         G   
Sbjct: 586 EKMSKSKKNLIDLETMQEQYGADAIRFFVLSDSPPEKDLEWSASGIE---------GCSR 636

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   M    ++ +       TE  + +  +    ++ + E++++  ++RA+A++  L
Sbjct: 637 FINRLEHM----FEAIDSLKDDITEISKELNRLVYFTIKHVAEDIKHFALNRAIARMREL 692

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ----LAILLQAFVPKLANKIFDI 476
            + +       K                 + V+ +R     L  LL  F+P +  +I+  
Sbjct: 693 SNAISAEISKDK-----------------IDVKTVRHGFNVLVQLLNPFIPHITEEIWQK 735

Query: 477 LFVADE--NRCFQSLDQRL 493
           L   +   N  F + D+ +
Sbjct: 736 LGNKERLYNSSFPAFDESM 754


>gi|303328459|ref|ZP_07358896.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861453|gb|EFL84390.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 947

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 16/109 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +      +PADL++ G D  R  FH+    + L+S   
Sbjct: 536 ILDVWFDSGTSFAAVL------EARPELSYPADLYLEGSDQHRGWFHS----SLLVSEGT 585

Query: 285 ---PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              P  + V +HG+++  +G K+SKS+GNVI P E+IE+ G + +R ++
Sbjct: 586 RGRPPYRSVLTHGYVVDGEGRKMSKSIGNVIAPQELIEKFGAEIVRLWV 634


>gi|303250523|ref|ZP_07336720.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307251565|ref|ZP_07533472.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650511|gb|EFL80670.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306861029|gb|EFM93035.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 33/216 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G+       D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYASVVEARPEFNGNST-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF++  KG K+SKSLGNVI P EV  + G D LR ++     
Sbjct: 576 MLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-----TPGAFTES 386
            G+            V+ ++ N  G    R   +   +L + +G  P      P      
Sbjct: 636 TGEIA----------VSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           D   +        +I+E   N   H  + +++   S
Sbjct: 686 DRWAVGCALEAQNDIKEAYDNYQFHTVVQRLMRFCS 721


>gi|302380674|ref|ZP_07269139.1| leucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311617|gb|EFK93633.1| leucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 802

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++ Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKKRFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  +V  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEVVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            YK       C S    L +E   N      G  GQ      N  QWM       +++ Y
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGHCERCG--GQVVRKVKN--QWM------LKITEY 198

Query: 173 QDKLL 177
            D+L+
Sbjct: 199 ADRLI 203



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 26/177 (14%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEKISKSLG 308
           P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+SKS G
Sbjct: 528 PVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYMKRTSHGMILGDNNEKMSKSRG 587

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P +++ + G D LR + +      K   + ++G+K            + V R+  +
Sbjct: 588 NVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENGVKG------CRKFLDKVWRTQEL 641

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +  D             + E + ++  + ++++ E+ +N   + A+AQ+++L++E +
Sbjct: 642 VDGD------------SNFEKMETLIHQTIKKVSEDYENLKFNTAIAQLMTLLNEFN 686


>gi|224419178|ref|ZP_03657184.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 650

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +          +  ++  +PA L++ G D  R  FH+    +  ++  
Sbjct: 540 HILDVWFDSGSTWKAVL----QSNLYRSGGYPASLYLEGSDQHRGWFHSSLLVSCAVNEK 595

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K + +HGF +  KGEK+SKS GNV+ P EV++E G + LR ++ 
Sbjct: 596 APY-KAIVTHGFTMDEKGEKMSKSKGNVVVPKEVLKEFGSEILRLWVA 642



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E   +     Y N   HIGHA   I+ D++ ++H   G  + +T G D HG  I +  +
Sbjct: 48  KESFNLHDGPPYANGHLHIGHALNKILKDIINKYHYFQGKKIFYTPGWDCHGLPIEQQVE 107


>gi|169824320|ref|YP_001691931.1| leucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|238687733|sp|B0S101|SYL_FINM2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167831125|dbj|BAG08041.1| leucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 802

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++ Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKKRFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  +V  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEVVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            YK       C S    L +E   N      G  GQ      N  QWM       +++ Y
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGHCERCG--GQVVRKVKN--QWM------LKITEY 198

Query: 173 QDKLL 177
            D+L+
Sbjct: 199 ADRLI 203



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 26/177 (14%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEKISKSLG 308
           P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+SKS G
Sbjct: 528 PVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYMKRTSHGMILGDNNEKMSKSRG 587

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P +++ + G D LR + +      K   + ++G+K            + V R+  +
Sbjct: 588 NVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENGVKG------CRKFLDKVWRTQDL 641

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +  D             + E + ++  + ++++ E+ +N   + A+AQ+++L++E +
Sbjct: 642 VDGD------------SNFEKMETLIHQTIKKVSEDYENLKFNTAIAQLMTLLNEFN 686


>gi|149918904|ref|ZP_01907390.1| putative leucyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820278|gb|EDM79695.1| putative leucyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 900

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R+ G +VL   G D  G    +
Sbjct: 28  RSKPKYYVLDMFPYPSGSGLHVGHPEGYTATDIIARYKRMKGFNVLHPMGWDSFGLPAER 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G    V  D+   NF+    +L  SYD
Sbjct: 88  YAMKTGTHPAVRTDECIANFKRQLKMLGFSYD 119



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNVI+P +VI E G D +R + +          +  +G+         NG   
Sbjct: 662 DKMSKSRGNVINPDDVIAEYGADTMRLYEMFMGPLEASAPWQPEGV---------NGCFR 712

Query: 361 LVSRSVSMIL-KDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            ++R+  +   +  DG       F E +  E    +  R + E+ E ++    + A++ +
Sbjct: 713 FLARAYRLFFEQGKDGAADAVREFAEGEGTEDQRRLLHRTISEVSERIERMSFNTAISSL 772

Query: 418 ISLVSEVDR 426
           +  V +V++
Sbjct: 773 MVFVRDVEK 781


>gi|119509064|ref|ZP_01628215.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466230|gb|EAW47116.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 873

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYKVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + GV    +  QN    R     L ++ D
Sbjct: 92  DRGVPPAKWTYQNIAQMRQQLQRLGLAID 120



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 20/175 (11%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +VI + GVD  R F++ +    KD  +D+  ++ +      N +  LV
Sbjct: 635 MSKSKGNGVAPEDVISKYGVDTARMFILFKAPPEKDLEWDEADVEGQFR--FLNRVWRLV 692

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +   +  +      +      ++ ++ +       +Q + E+++++       Q  + VS
Sbjct: 693 TDYATAGVSRKKAQL---SDLSKPEKELRRAIHTAIQAVTEDLEDEY------QFNTAVS 743

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E+ +  +A        T+ D  ++ +Y   E I+ L I+L  F P +A++++  L
Sbjct: 744 ELMKLSNAL-------TDADCKNSPIY--AEGIQTLVIMLAPFAPHIADELWQSL 789


>gi|13508123|ref|NP_110072.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501026|sp|P75398|SYL_MYCPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1674141|gb|AAB96101.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 793

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+A   H+GH     I DVL+R+H+  G +V+   G D  G    +
Sbjct: 27  KTKPKYYILDMFPYPSAAGLHLGHVRAYTITDVLSRYHKAKGFNVIHPIGFDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKG 117
            A  +      + D+N  NF +        YD    ++TT+ R++   + ++ ++ + G
Sbjct: 87  YAIASNKHPGDWTDKNITNFIEQLTAFGFDYDYQLSLKTTDPRYYQYTQWIFGQLFEAG 145



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 10/86 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKIS 304
           ++ P DL+V G +    H +Y   W  FL     ++   P  KK+ + G +L   G+K+S
Sbjct: 513 RYLPVDLYVGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPF-KKLINQGMVLGPDGKKMS 571

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLV 330
           KS GN I+P  +I+  G DALR +L+
Sbjct: 572 KSKGNTINPTPLIDSHGADALRLYLM 597


>gi|15826893|ref|NP_301156.1| leucyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229371|ref|YP_002502787.1| leucyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|3122915|sp|Q50192|SYL_MYCLE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782508|sp|B8ZTR5|SYL_MYCLB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2370271|emb|CAA75192.1| leucyl-tRNA synthetase [Mycobacterium leprae]
 gi|13092440|emb|CAC29540.1| leucyl-tRNA synthase [Mycobacterium leprae]
 gi|219932478|emb|CAR70125.1| leucyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 972

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGDGLHVGHPLGYIATDVYARYFRMTGHNVLHAMGFDAFGLPAEQYAM 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   ++  + N  NFR     L + +D
Sbjct: 129 QTGTHPRILTEANVVNFRHQLGRLGLGHD 157


>gi|320101651|ref|YP_004177242.1| valyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319748933|gb|ADV60693.1| valyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 932

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 26/279 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAI 273
           G  +  DP  ++  W  +     +T G+ +  +  K K++P  +    +DI+       +
Sbjct: 469 GRTLTQDPD-VLDTWFSSALWPHSTLGWPEATEDLK-KYYPTSVLSTARDIITLWVARMV 526

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            +  F L+  +P  + V+ H  I   +G ++SKSLGN IDP++VIE  G DALR+ L   
Sbjct: 527 MFGQFNLN-EVPF-RDVYIHPVIQDGQGRRMSKSLGNGIDPVDVIELYGADALRFTLASS 584

Query: 333 IACGKDGFYDKDGLK----KRVNAD--------LANGIGNLVSRSVSMILKDYDGMIPTP 380
               +D     + ++    ++VN            N   N  +R   M L+ +  +    
Sbjct: 585 ATETQDLRMPVEQVQLPDGRKVNTSERFEQGRTFPNKFWN-AARFALMNLEGHQALEYDR 643

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
            +    D  ILS+ +R  + I  +++              +     D Y +  K    + 
Sbjct: 644 ASLPVEDRWILSLLARASRTITADLEAFRFAEMAKTTRDFIWGDFCDWYLELVKG---RL 700

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            NP+   T   V   V+ QL  L+Q  +P +A +++  L
Sbjct: 701 RNPETRPTAQRVLAGVLDQLCRLIQPMMPFVAEQVWQAL 739



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 14/77 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D+L R+ R  G D L+  GTD           +AG+ T+  V++  R F
Sbjct: 55  HLGHALNNTIQDILIRWRRAQGYDALWLPGTD-----------HAGIATQAVVEK--RLF 101

Query: 81  RDMADVL-DISYDDFIR 96
           ++      D+  D+ +R
Sbjct: 102 QEEKKTRHDLGRDELVR 118


>gi|315171940|gb|EFU15957.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
          Length = 933

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  +
Sbjct: 692 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTI 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|313608433|gb|EFR84369.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 532

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 253 AKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           A++ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+S
Sbjct: 247 AEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMS 306

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KS GNV++P EV+E+ G D LR +      L   IA  ++G         R+   L    
Sbjct: 307 KSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEE 366

Query: 359 GNLVSRSVS----MILKDYDGMIPT 379
           G L  +  +     + K Y  M+ T
Sbjct: 367 GTLAEKVTTDANANLEKAYHHMVKT 391


>gi|297807697|ref|XP_002871732.1| hypothetical protein ARALYDRAFT_326110 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317569|gb|EFH47991.1| hypothetical protein ARALYDRAFT_326110 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1101

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP--IERRNEVISFV-KSGLKDLSLSRKTFDWGIKIP 221
           +F  +    +K L   E+    I+P   E+  E    V K+  + L  + + +   ++I 
Sbjct: 638 WFVHMDPLAEKALLAVENKELTIIPERFEKDCEEDYIVAKNAEEALEKAHEKYGKDVEIY 697

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            DP  ++  W  +     +T G+ D        F+P ++   G  ++            +
Sbjct: 698 QDPD-VLDTWFSSSLWPFSTLGWPDVSAKDFNNFYPTNMLETGMVMMGIE--------FT 748

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             +P    V+ HG I   +G K+SKSLGNVIDP++ I++ G DALR+     IA G  G
Sbjct: 749 GTVPF-SHVYLHGLIRDSQGRKMSKSLGNVIDPLDTIKDFGTDALRF----TIALGTAG 802


>gi|288553142|ref|YP_003425077.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544302|gb|ADC48185.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 921

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    +  ++   P  K V SHGF L  +G K+SKS+GNV+ P
Sbjct: 547 PADLYLEGSDQYRGWFNSSLSTSVAVTGKAPY-KGVLSHGFALDGQGRKMSKSVGNVVVP 605

Query: 314 IEVIEEVGVDALRYFLV 330
            +V++++G D LR ++ 
Sbjct: 606 NDVMKQLGADILRLWVA 622



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y N   H+GHA   ++ D + R+  ++G    +  G D HG  I  A    G
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRYKSMNGFHAPYVPGWDTHGLPIETALTKNG 109


>gi|145344290|ref|XP_001416669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576895|gb|ABO94962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1056

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 59/130 (45%), Gaps = 20/130 (15%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKS 306
           A+F+P  L   G DIL F    W A ++   + L  KV      LH       G K+SKS
Sbjct: 599 AEFYPTSLLETGHDILFF----WVARMVMMGMKLTGKVPFKQVYLHAMVRDAHGRKMSKS 654

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR---VNADLANGIGNLVS 363
           LGNVIDP+ VIE + + AL   LV        G  D+   KK      AD  +GI    +
Sbjct: 655 LGNVIDPLHVIEGIDLAALNETLV-------GGNLDEKERKKAQAGQKADFPDGIPECGT 707

Query: 364 RSVSMILKDY 373
            ++   L  Y
Sbjct: 708 DAMRFALVSY 717


>gi|52425806|ref|YP_088943.1| isoleucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81825491|sp|Q65RQ2|SYI_MANSM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52307858|gb|AAU38358.1| IleS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G +A     D+++ G D  R    +  + 
Sbjct: 533 KVPD----TLDVWFDSGSTYYSVVKNRPEFNGKEA-----DMYLEGSDQHR--GWFMSSL 581

Query: 279 LLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 582 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 641

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P             D  
Sbjct: 642 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVQAHEMISLDRW 694

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +    R   EI+E   N   H  + +++   S
Sbjct: 695 AVDCAFRAQAEIKEAYDNYQFHTVVQRLMKFCS 727


>gi|265764732|ref|ZP_06093007.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263254116|gb|EEZ25550.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 943

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              G    +    N   +R+  D +  S+D    IRT +  ++
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYY 132



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 54/276 (19%), Positives = 116/276 (42%), Gaps = 52/276 (18%)

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYL------TTTGYLDNPDGSKAKFWPADLHVIGKD 266
           DWGI + ++P  + +    I   +N++       T   L+  D  +      D++++  D
Sbjct: 624 DWGISVAEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLNLKDQYEVTPIHVDVNIVSND 683

Query: 267 ILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           IL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E+ G D L
Sbjct: 684 ILDLEAFKAWRPEYETAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIVEKYGADTL 740

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R + +      +   +D +G+         +G+   + +  S+    YD      G +  
Sbjct: 741 RMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLF---YD----RNGEYLV 784

Query: 386 SDESI----LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            DE      L    ++++++  +++    + +++  +  V+E+                 
Sbjct: 785 KDEPATKEELKALHKLIKKVTGDIEQFSYNTSVSAFMICVNEL----------------- 827

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              S++     EV+ QL ++L  F P +  +++D L
Sbjct: 828 ---SSLKCNKKEVLEQLIVVLAPFAPHVCEELWDTL 860


>gi|302531325|ref|ZP_07283667.1| leucyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302440220|gb|EFL12036.1| leucyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 962

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV AR+HR+ G +VL T G D  G    + A 
Sbjct: 67  DKLFVQDMFPYPSGSGLHVGHPLGYIGTDVYARYHRMIGRNVLHTLGYDAFGLPAEQYAV 126

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   +QN    R     L + +D+
Sbjct: 127 QTGTHPRTTTEQNIATMRRQLKRLGLGHDE 156


>gi|255714076|ref|XP_002553320.1| KLTH0D14058p [Lachancea thermotolerans]
 gi|238934700|emb|CAR22882.1| KLTH0D14058p [Lachancea thermotolerans]
          Length = 880

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+YI +   YP+   HIGH     I D L RF++L+G +V+   G D  G     AA  
Sbjct: 49  KKMYILSMFPYPSGILHIGHLRVYTITDALNRFYKLNGFNVVHPMGWDAFGLPAENAAIE 108

Query: 65  AGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             V    +  QN    R   D  + D+ +D  + T    ++   + L+ ++   G  Y+
Sbjct: 109 RKVNPATWTMQNISKMRVQLDNMLADLDWDREVTTCNPDYYKHTQKLFLELFKHGLAYQ 167


>gi|126736211|ref|ZP_01751954.1| leucyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714377|gb|EBA11245.1| leucyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 847

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G ++L   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLATGHNILHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
             +G   K +   N  + +     L +S D   +F  T + +++   + L+     KG I
Sbjct: 90  MASGGHPKDWTYSNIADMKAQMKPLGLSIDWSREFA-TCDPKYYGQQQALFIDFLSKGLI 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  +      N+  +    DG+ + +    V+  E   +FF++S Y ++LLS
Sbjct: 149 YRKKAVVNWDPVDMTVLANEQVI----DGKGWRSGAE-VERRELVQWFFKISDYSEELLS 203


>gi|313886208|ref|ZP_07819938.1| leucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924387|gb|EFR35166.1| leucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 36/218 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D+H++  DIL   A   W   L  A  +      +  GF +   EK+SKS+ NVI+P E+
Sbjct: 661 DIHLVQNDILDQEAFRQWRDDLHDATFITEADGSYLCGFAV---EKMSKSMFNVINPDEI 717

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G D LR + +      +   +D +G+         +G+   + R V  +  D +G 
Sbjct: 718 IEQYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVYRFLKR-VWSLYHDGEGQ 767

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +    +   S E + ++  +++Q+I ++++    + +++  +  V E+ +   AQ     
Sbjct: 768 LTVSASAQASREELRTI-HKLIQKITQDIERLSFNTSVSAFMIAVGELQK---AQT---- 819

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                         ++EV+R L ILL  F P +A  ++
Sbjct: 820 -------------TSLEVLRPLVILLSPFAPHIAEMLW 844



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +++   Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D  G    Q
Sbjct: 28  RDKPSYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGYNVLHPMGYDAFGLPAEQ 87

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  ++   TT+V    N   +R+  D +   +D
Sbjct: 88  YAIQTNRHPEETTRV----NIARYREQLDNIGFGFD 119


>gi|239947311|ref|ZP_04699064.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921587|gb|EER21611.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 834

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N  N +     +  SYD
Sbjct: 86  KNNSHPKDWTYSNIENMKKQLKSMGFSYD 114



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 36/199 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N+ID   + E+ G DA+R+F++ +    KD  +   G++         G   
Sbjct: 601 EKMSKSKKNLIDLETMQEQYGADAIRFFVLSDSPPEKDLEWSASGIE---------GCSR 651

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   M    ++ +       TE  + +  +    ++ + E++++  ++RA+A++  L
Sbjct: 652 FINRLEHM----FEAIDSLKDDITEISKELNRLVYFTIKHVAEDIKHFALNRAIARMREL 707

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ----LAILLQAFVPKLANKIFDI 476
            + +       K                 + V+ +R     L  LL  F+P +  +I+  
Sbjct: 708 SNAISAEISKDK-----------------IDVKTVRHGFNVLVQLLNPFIPHITEEIWQK 750

Query: 477 LFVADE--NRCFQSLDQRL 493
           L   +   N  F + D+ +
Sbjct: 751 LGNKERLYNSSFPAFDESM 769


>gi|219685784|ref|ZP_03540594.1| isoleucine--tRNA ligase [Borrelia garinii Far04]
 gi|219672669|gb|EED29698.1| isoleucine--tRNA ligase [Borrelia garinii Far04]
          Length = 912

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 14/242 (5%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
            +N    K  F PAD    G D  R    ++   +L A+L      K V  +G +L   G
Sbjct: 536 FENESNFKNTF-PADFIAEGLDQTR--GWFYTLTILGASLFENTAFKNVIVNGLVLSSDG 592

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N  DP+EVI   G DALR +L+       D     D   + V  ++   I N
Sbjct: 593 RKMSKSFKNYTDPMEVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWN 652

Query: 361 LVSRSVSMILKDYDGMIPTPG-AFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             S   +  +   D   P    +  +S   D+ I+S    + + + + +    + +++  
Sbjct: 653 AYSFFTTYAI--IDKFKPAKNLSLVKSNNLDKWIISELESLKKILNKEIDKYNLTKSIES 710

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475
           ++  + +++ ++  +      K+  D+     Y T+   I+ L ILL  F+P +  +I+ 
Sbjct: 711 LLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQ 770

Query: 476 IL 477
            L
Sbjct: 771 NL 772


>gi|194873283|ref|XP_001973176.1| GG15950 [Drosophila erecta]
 gi|190654959|gb|EDV52202.1| GG15950 [Drosophila erecta]
          Length = 938

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+ + +    G        K K   ADL++ G D  +F   +  + L+S  A  
Sbjct: 559 ILDIWFDSGSTWSAVLG--------KDKI--ADLYLEGYD--QFTGWFQSSLLMSIAARE 606

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P K +F HGF +  KG K+SKSLGNVI P ++ ++ G DALR+++ 
Sbjct: 607 CAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKKYGTDALRWWVA 654


>gi|67459043|ref|YP_246667.1| leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536521|sp|Q4ULS1|SYL_RICFE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67004576|gb|AAY61502.1| Leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 835

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 K +   N  N +     +  SYD
Sbjct: 86  KNNSHPKDWTYSNIENMKKQLKSMGFSYD 114



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 94/195 (48%), Gaps = 27/195 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N+ID + + E+ G DA+R F++ +    KD  +   G++    +   N + +
Sbjct: 601 EKMSKSKKNLIDLVTMQEQYGADAIRLFVLSDSPPEKDLEWSASGIEG--CSRFINKLEH 658

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +   +++ ++ D +         +E ++ +  +    ++ + +++++ +++RA+A++  L
Sbjct: 659 MF-EAIASLIDDVN---------SEINKELNRLVHFTIKHVADDIKHFVLNRAIARMREL 708

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +          EL K   D   TV Y    VI Q   LL  F+P +  +I+  L   
Sbjct: 709 SNAISA--------ELNKEVVD-VKTVRY-GFNVIVQ---LLNPFIPHITEEIWQKLGNK 755

Query: 481 DE--NRCFQSLDQRL 493
           +   N  F + D+ +
Sbjct: 756 ERLYNSAFPAFDESM 770


>gi|313199869|ref|YP_004038527.1| valyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439185|gb|ADQ83291.1| valyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 948

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 16/121 (13%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL- 297
           +D  + +  ++ P+ + V G DI+ F    W A +      L+  +P  K V+ HG I  
Sbjct: 491 VDAANQALQQYLPSSVLVTGFDIIFF----WVARMVMMTTHLTGKIPF-KHVYVHGLIRD 545

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+K+SKS GNV+DPI++I+ + +DA    L+++   G     D + ++KR   +   G
Sbjct: 546 AEGQKMSKSKGNVLDPIDLIDGIDLDA----LIKKRTTGLMNPKDAEKIEKRTRKEFPEG 601

Query: 358 I 358
           I
Sbjct: 602 I 602



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GH +   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 61  HMGHGFNQTIMDALTRYHRMRGDNTLWQPGTD-----------HAGIATQIVVERQ 105


>gi|255011976|ref|ZP_05284102.1| leucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149812|ref|ZP_07812005.1| leucine-tRNA ligase [Bacteroides fragilis 3_1_12]
 gi|313138579|gb|EFR55939.1| leucine-tRNA ligase [Bacteroides fragilis 3_1_12]
          Length = 943

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              G    +    N   +R+  D +  S+D    IRT +  ++
Sbjct: 90  IQTGQHPAITTINNINRYREQLDKIGFSFDWNREIRTCDPEYY 132


>gi|251810623|ref|ZP_04825096.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876376|ref|ZP_06285243.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805783|gb|EES58440.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295401|gb|EFA87928.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 916

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---CGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|12045122|ref|NP_072933.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|2507608|sp|P47508|SYL_MYCGE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3844862|gb|AAC71488.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078891|gb|ABY79509.1| leucyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 792

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+A   H+GH     I DV++R+++  G +V+   G D  G    + A
Sbjct: 29  KKKYYVLDMFPYPSAAGLHLGHVRAYTITDVISRYYKAKGFNVIHPIGFDAFGLPAEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
            N+      + DQN  NF +        YD    ++TT+ R++   + ++ ++
Sbjct: 89  INSNQNPGSWTDQNINNFINQLTSFGFDYDYHLSLKTTDPRYYKYTQWIFSEL 141



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 18/121 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNP-----DGSKAK-----FWPADLHVIGKDILRFHAIY--- 274
           M  W  +   YL     + NP     D  +AK     + P DL+V G +    H +Y   
Sbjct: 477 MPQWAGSCWYYLGYLMLIKNPNFWPIDSKEAKKLFDQYLPVDLYVGGAEHAVLHLLYARF 536

Query: 275 WPAFLLSANLPLPK----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           W  FL    L   K    K+ + G +L   G+K+SKS GN I+P  +++  G DALR +L
Sbjct: 537 WHKFLFDKKLVSTKEPFQKLINQGMVLGPDGKKMSKSKGNTINPTPLVDSHGADALRLYL 596

Query: 330 V 330
           +
Sbjct: 597 M 597


>gi|67609547|ref|XP_667040.1| valyl tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54658131|gb|EAL36810.1| valyl tRNA synthetase [Cryptosporidium hominis]
          Length = 1042

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 253 AKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGN 309
           + F+P  L   G DIL F    +   +F  +  LP  K ++ H  +   +G K+SKSLGN
Sbjct: 563 STFFPTTLLETGSDILFFWVARMVMLSFACTDKLPF-KTIYLHAMVRDSQGRKMSKSLGN 621

Query: 310 VIDPIEVIEEVGVDAL 325
           VIDPIE+IE + +D L
Sbjct: 622 VIDPIEIIEGISLDDL 637


>gi|227509388|ref|ZP_03939437.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191100|gb|EEI71167.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 942

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  +S   
Sbjct: 534 IMDVWFDSGSSHQGVLAA--RPELT----YPADMYLEGSDQYRGWFNSSLITSVAVSNKA 587

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF L  KG K+SKSLGN I PI++I+++G + +R ++ 
Sbjct: 588 PY-KSIVSQGFTLDGKGHKMSKSLGNTIAPIDIIKKMGAEIVRLWVT 633



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    +  G D HG  I +    AG   K    
Sbjct: 65  YANGDIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYDRK---K 121

Query: 75  QNSRNFRDMA 84
            ++ +FR + 
Sbjct: 122 MSTNDFRKLC 131


>gi|194476997|ref|YP_002049176.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192004|gb|ACB42966.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
          Length = 967

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++ + T         +   +PADL++ G D  R  F +    +  ++   P
Sbjct: 549 MDVWFDSGSSWASVTS------KREGLSYPADLYLEGSDQHRGWFQSSLLTSTAVNGYAP 602

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
             KKV +HGF+L  KG K+SKSLGN+IDP  +++
Sbjct: 603 Y-KKVITHGFVLDEKGRKMSKSLGNIIDPASILK 635



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 25/54 (46%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           EK  +     Y N   H+GH    ++ D++ ++  L G  V F  G D HG  I
Sbjct: 53  EKFVLHDGPPYANGDLHMGHVLNKVLKDIINKYQLLRGRKVCFVPGWDCHGLPI 106


>gi|163758409|ref|ZP_02165497.1| isoleucyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284698|gb|EDQ34981.1| isoleucyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 1000

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 15/116 (12%)

Query: 223 DPQYI-----MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           DP++I     + VW D+ + +  T    D PD      WPAD+++ G D  R  FH+   
Sbjct: 592 DPKWIQVTDILDVWFDSGSTHAFT--LEDRPDLK----WPADVYLEGSDQHRGWFHSSLL 645

Query: 276 PAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       P    V +HGF + + G K+SKSL N + P ++++E G D LR +++
Sbjct: 646 ESCATRGRAPY-DAVITHGFTMAEDGRKMSKSLNNQVFPQDIMKESGADILRLWVM 700



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I
Sbjct: 54  RPKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDSNYVPGWDCHGLPI 108


>gi|53715865|ref|YP_101857.1| leucyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60390679|sp|Q64MG4|SYL_BACFR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52218730|dbj|BAD51323.1| leucyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 943

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              G    +    N   +R+  D +  S+D    IRT +  ++
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYY 132



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 54/276 (19%), Positives = 116/276 (42%), Gaps = 52/276 (18%)

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYL------TTTGYLDNPDGSKAKFWPADLHVIGKD 266
           DWGI + ++P  + +    I   +N++       T   L+  D  +      D++++  D
Sbjct: 624 DWGISVAEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLNLKDQYEVTPIHVDVNIVSND 683

Query: 267 ILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           IL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E+ G D L
Sbjct: 684 ILDLEAFKAWRPEYETAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIVEKYGADTL 740

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R + +      +   +D +G+         +G+   + +  S+    YD      G +  
Sbjct: 741 RMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLF---YD----RNGEYLV 784

Query: 386 SDESI----LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            DE      L    ++++++  +++    + +++  +  V+E+                 
Sbjct: 785 KDEPATKEELKALHKLIKKVTGDIEQFSYNTSVSAFMICVNEL----------------- 827

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              S++     EV+ QL ++L  F P +  +++D L
Sbjct: 828 ---SSLKCNKKEVLEQLIVVLAPFAPHVCEELWDTL 860


>gi|58258417|ref|XP_566621.1| isoleucine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134106407|ref|XP_778214.1| hypothetical protein CNBA2140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260917|gb|EAL23567.1| hypothetical protein CNBA2140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57222758|gb|AAW40802.1| isoleucine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1094

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 96/238 (40%), Gaps = 18/238 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +PAD    G D  R  F+ +      L    P    + +   +   G+K+SK L N  
Sbjct: 565 KSYPADFISEGIDQTRGWFYTLLVLGTHLFETAPWKNLIVTGLVLAADGKKMSKKLKNYP 624

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNL--------- 361
           DP+EV+ + G D +R FLV       D   + ++G+++ +   +   I +L         
Sbjct: 625 DPMEVVNKYGADCVRLFLVNSPVVRADNLRFREEGVREILTNVILKWINSLNFYLGQVEL 684

Query: 362 -VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
               +    + D+D    T       D  IL+ C  ++Q +   M    ++  + +++ L
Sbjct: 685 FEQTTGDKFVYDHDAKKST----NVMDRWILATCQTLIQHVETEMAAYRLYTVIPKLLDL 740

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +S++  ++       LK +   +     L    E +  L + + +F P     ++  L
Sbjct: 741 ISDLTNWYIRFNRSRLKGSGGVEDTRAALNTLYEALLTLCLTMSSFTPFTCETVYQAL 798


>gi|309775575|ref|ZP_07670575.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916669|gb|EFP62409.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 799

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++ R  R+ G +VL   G D  G    + 
Sbjct: 30  DKPKCYVLDMFPYPSGNGLHVGHPEGYTATDIVCRMKRMQGHNVLHPMGWDAFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F   N  +FR+    L  SY  D  I TT+  ++   + ++ K+ DKG  
Sbjct: 90  AITTGNHPAQFTKMNIDHFREQIRALGFSYDWDREISTTDPNYYKWTQWIFLKLYDKGLA 149

Query: 120 Y 120
           Y
Sbjct: 150 Y 150



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 47/235 (20%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           K W P DL+V G +    H +Y   W   L    +   K    ++F  G IL    EK+S
Sbjct: 518 KHWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVPTKEPFQRLFHQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +++E  G DALR + +          +   GL         +G    + R
Sbjct: 578 KSRGNVVNPDDIVESHGADALRVYEMFMGPLEAALPWSTTGL---------DGARRWLDR 628

Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            V  +  +YD        FTE+++  L  V    ++++  +++   ++ A++Q++  ++E
Sbjct: 629 -VWRLYTEYD-------KFTETNDGKLDKVYHATVKKVTNDVETLNLNTAISQMMIFINE 680

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               + A+                  + VE  +  A +   F P +  +I+  +F
Sbjct: 681 C---YKAES-----------------IYVEYAKGFAKMFACFAPHMGEEIWSRVF 715


>gi|299140744|ref|ZP_07033882.1| valine--tRNA ligase [Prevotella oris C735]
 gi|298577710|gb|EFI49578.1| valine--tRNA ligase [Prevotella oris C735]
          Length = 898

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 23/204 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH 298
           +++PD  +  ++ P    V G DI+ F    W A ++ A     K      V+  G +  
Sbjct: 490 VNHPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRKTYPFKHVYFTGIVRD 545

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N      
Sbjct: 546 KLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN------ 599

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E I +    V  E++E  +   I  AL  V
Sbjct: 600 FNNKIWNAFRLVKGWQAADIEQPTCNKLAVEWIAAKLKEVNAELQEQFKQYRISEALMTV 659

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP 441
             L      ++D    W L+   P
Sbjct: 660 YKL------FWDEFSSWYLEMVKP 677


>gi|255067791|ref|ZP_05319646.1| valine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255048002|gb|EET43466.1| valine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 945

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|195590645|ref|XP_002085055.1| GD14596 [Drosophila simulans]
 gi|194197064|gb|EDX10640.1| GD14596 [Drosophila simulans]
          Length = 938

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+ + +    G        K K   ADL++ G D  +F   +  + L+S  A  
Sbjct: 559 ILDIWFDSGSTWSAVLG--------KDKI--ADLYLEGYD--QFTGWFQSSLLMSIAARE 606

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P K +F HGF +  KG K+SKSLGNVI P ++ ++ G DALR+++ 
Sbjct: 607 CAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKKYGTDALRWWVA 654



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N Q H+GHA   I+ D+  R     G  V +  G D HG  I  KA   A   +   +
Sbjct: 82  YANGQLHMGHAVNKILKDITLRQRVAHGQQVNYIPGWDCHGLPIELKATSTAPGQSAQEI 141

Query: 74  DQNSRNF 80
            Q SR F
Sbjct: 142 RQKSRAF 148


>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 932

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+     T  G L  +PD S    +P DL++ G D  R  F++    +   +  
Sbjct: 533 IMDVWFDS---GCTHQGVLKHDPDLS----YPCDLYLEGSDQHRGWFNSSLLTSVATNGY 585

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K V +HGF +  +G K+SKS+GN + P EVIE+ G D +R ++
Sbjct: 586 APY-KAVLTHGFTVDGEGRKMSKSVGNTVAPQEVIEKYGADVMRLWV 631



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 15/132 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-QN 64
           K  +     Y N + HIGHA   ++ D++ ++    G    +  G D HG  I  A  +N
Sbjct: 49  KFILHDGPPYANGKLHIGHALNKVLKDIVLKYKTQQGFYTKYVPGWDTHGLPIEHAVIKN 108

Query: 65  AGVTTKVFVDQNSR-NFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LW 110
            G+          R   RD A + ++I  +DFIR            T + H +  +I ++
Sbjct: 109 TGLNRHEMTPLELRKKCRDYALEQVEIQKNDFIRFGVLGEWEHPYLTLQHHIEVEQIGVF 168

Query: 111 KKISDKGDIYKG 122
            K++  G IYKG
Sbjct: 169 GKMAKNGHIYKG 180


>gi|115433634|ref|XP_001216954.1| valyl-tRNA synthetase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
 gi|114189806|gb|EAU31506.1| valyl-tRNA synthetase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
          Length = 998

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D     + K++P      G DIL F       F L     +
Sbjct: 516 VLDTWFSSALWPFSTLGWPDKTSDLE-KYFPNTTMETGWDILPFWVSRMIMFSLKLTGKV 574

Query: 287 P-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  +VF HG I    G K+SKSLGNVIDPI++++ + +D L+  L+
Sbjct: 575 PFTEVFCHGLIRDSDGRKMSKSLGNVIDPIDILDGISLDDLQQKLL 620


>gi|227499835|ref|ZP_03929928.1| leucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217944|gb|EEI83217.1| leucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 800

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 7/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++  G D  G     
Sbjct: 29  KNKKKFYPLVEFPYPSGQGLHVGHPRPYTALDVVARKRRLEGENVMYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +      + N +NF+     +  S+  D  + TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNKIHPAKVTEDNIKNFKAQMKSIGFSFDWDREVNTTDPDYYKWSQWIFIQMYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            YK   S  +    +    ++EV    DG+        V  M+ + +  +++AY D+L+
Sbjct: 149 AYKNEMSVNWCPSCQVGLANEEV---VDGKCERCGTEVVHKMKNQ-WMLKITAYADRLI 203



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 27/179 (15%)

Query: 255 FWPADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHKG-EKISK 305
           F P D +  G +    H +Y   W  FL    + +P     KK  SHG IL    +K+SK
Sbjct: 524 FSPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGV-VPTKEPYKKRTSHGMILGSDHQKMSK 582

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNVI+P ++I + G D LR + +          +  +G++         G    + R 
Sbjct: 583 SRGNVINPDDIIRDYGADTLRCYEMFMGDFSSMAIWSDEGVR---------GCRKYLERV 633

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +  LKD        G   E  + +  + ++ ++++ E+ +N   +  +AQ+++L++E+
Sbjct: 634 FN--LKDL------VGEGEEHSKDLEVLINQTIKKVSEDYENLKFNTGIAQLMTLLNEM 684


>gi|187251551|ref|YP_001876033.1| isoleucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971711|gb|ACC98696.1| Isoleucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 942

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 39/194 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW+D+  ++             +   +PAD+++ G D  R  F +   P+  L    
Sbjct: 538 ILDVWLDSGCSWRAVLK-------DRGLKYPADMYLEGADQHRGWFQSSLIPSVALEGKS 590

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL--------VR---E 332
           P  +++ +HGF+L + G  + KSLGN ++P EV ++ G D LR ++        +R   E
Sbjct: 591 PF-RQILTHGFVLDQHGHAMHKSLGNSVEPHEVFDKYGADILRLWVSLSDYQDDIRISDE 649

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESI 390
           I  G    Y      +R+       +G+L          DYD  I    P   TE D  +
Sbjct: 650 ILSGPVDSY------RRLRNTFRYAMGSLF---------DYDPEIHKMKPEEMTEIDRYM 694

Query: 391 LSVCSRVLQEIREN 404
           LS    +++E  EN
Sbjct: 695 LSKLDTLIKESLEN 708


>gi|329963697|ref|ZP_08301143.1| leucine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328527707|gb|EGF54699.1| leucine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 945

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 40/222 (18%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDIEAFKAWRPEYATAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-- 375
           E+ G D LR + +      +   +D +G+         +G+   + +  S+   D +G  
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFY-DRNGRY 783

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           ++    A  E  +S+  +  +V  +I +   N  I  A    ++ +S +  Y        
Sbjct: 784 LVTDEPATKEELKSLHKLIKKVTGDIEQFSYNTSIS-AFMICVNELSGLKCY-------- 834

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KK              E++ QL + L  F P +  ++++ L
Sbjct: 835 -KK--------------EILNQLVVTLAPFAPHVCEELWETL 861


>gi|261378077|ref|ZP_05982650.1| valine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145525|gb|EEZ71943.1| valine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 945

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|27468349|ref|NP_764986.1| leucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251811139|ref|ZP_04825612.1| leucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|293366301|ref|ZP_06612981.1| leucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315895|gb|AAO05030.1|AE016748_264 leucyl-rRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251805359|gb|EES58016.1| leucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|291319539|gb|EFE59905.1| leucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 814

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 40  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 100 LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 159

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ V    DG      H PV     + +  +++ Y D+LL
Sbjct: 160 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLL 212



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 524 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 583

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P +++   G D LR +      L   IA  + G    DG ++     
Sbjct: 584 NEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGPLDAAIAWSEKGL---DGSRR----- 635

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                   + R   +I+ D + +         ++ S+  V ++ ++++ E+      + A
Sbjct: 636 -------FLDRVWRLIITDENSI--NKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTA 686

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  ++E  +  +  KP+
Sbjct: 687 ISQLMVFINECYKTNEVYKPY 707


>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 910

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 10/103 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T++       D+        +PADL++ G D  R  F++    +  +S + 
Sbjct: 524 IMDVWFDSGTSHQGCCAVRDDLT------YPADLYLEGSDQYRGWFNSSLITSVAISGDA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K++ S GF++   G K+SKSLGNVI P +V +++G + +R
Sbjct: 578 PY-KELVSAGFVMDGNGNKMSKSLGNVISPNDVGKQLGAEIIR 619



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +   N GV  K    
Sbjct: 59  YANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIEQVLVNNGVDRKSMPA 118

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +  + D   + ++    K   +  R+  K + DKG 
Sbjct: 119 TKFRNKCKDYALKQVDKQRADFKKLGVIGDWE-NPYLTLDPKFEAEQIRVFGKMV-DKGY 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 177 IYKGLKPIYWSPSSESALAEAEI 199


>gi|326335982|ref|ZP_08202159.1| isoleucyl-tRNA synthetase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691946|gb|EGD33908.1| isoleucyl-tRNA synthetase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 1138

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 10/101 (9%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 636 KAFPADFIAEGVDQTRGWFYTLHAIATSVFDSVAY----KNVMSNGLVLDKNGQKMSKRL 691

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           GN +DP E + + G DA R++++       +  +D +G+++
Sbjct: 692 GNAVDPFETLAKYGADATRWYMISNANPWDNLKFDVEGIEE 732


>gi|328353003|emb|CCA39401.1| valyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 1047

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ DN    K +F+P  +   G DIL F    +      L+ ++
Sbjct: 568 VLDTWFSSGLWPFSTLGWPDNTPDMK-QFYPFSMLETGWDILFFWVTRMILLGLKLTGDV 626

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGK 337
           P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      RE+   K
Sbjct: 627 PF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVINGISLEDLHAKLLGGNLDPREVEKAK 685

Query: 338 DG 339
            G
Sbjct: 686 KG 687


>gi|294338595|emb|CAZ86924.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Thiomonas
           sp. 3As]
          Length = 876

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  EK Y  + + YP+ + H+GH     I D+L R  R++G +VL   G D  G     A
Sbjct: 30  KPGEKFYACSMLPYPSGKLHMGHVRNYTINDMLTRHLRMNGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A    V    +   N     R  + M   +D S +  + T    ++   + L+ K+ +KG
Sbjct: 90  AMKNKVPPAKWTYDNIAYMKRQMQAMGLAIDWSRE--VATCSPEYYKWNQWLFLKMLEKG 147

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +      +   D+    +++V    DG+ + +    V+  E  GY+ +++ Y ++LL
Sbjct: 148 IAERRTQVVNWDPVDQTVLANEQVI---DGRGWRSG-AVVEKREIPGYYLKITDYAEELL 203

Query: 178 S 178
           +
Sbjct: 204 A 204


>gi|282875824|ref|ZP_06284691.1| leucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|281294849|gb|EFA87376.1| leucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329737148|gb|EGG73402.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737499|gb|EGG73752.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 805

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ V    DG      H PV     + +  +++ Y D+LL
Sbjct: 151 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLL 203



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 574

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++   G D LR + +          + + GL         +G  
Sbjct: 575 NEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGPLDAAIAWSEKGL---------DGSR 625

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ D + +         ++ S+  V ++ ++++ E+      + A++Q++ 
Sbjct: 626 RFLDRVWRLIITDENSI--NKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMV 683

Query: 420 LVSEVDRYFDAQKPW 434
            ++E  +  +  KP+
Sbjct: 684 FINECYKTNEVYKPY 698


>gi|237785946|ref|YP_002906651.1| valyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758858|gb|ACR18108.1| Valyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 933

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 33/207 (15%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL 280
           DP  ++  W  +     +T G+   P+ +K   KF+P  + V G DIL F       F  
Sbjct: 477 DPD-VLDTWFSSGLWPFSTMGW---PEHTKDLDKFYPTSVLVTGYDILFFWVARMMMFAT 532

Query: 281 SAN---------------------LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
            A+                     +P    +F HG +   +G K+SKSLGN IDP++ + 
Sbjct: 533 YADTLEDSTLHDGQGATAKDGRPQVPF-TDIFLHGLVRDEQGRKMSKSLGNGIDPMDWVR 591

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G DALR+ L R    G D     D  +   N   A  + N  +   +++     G +P
Sbjct: 592 DYGADALRFTLARGTNPGTDLPLGSDAAQSSRN--FATKLFN--ATRFALMNGAQVGPLP 647

Query: 379 TPGAFTESDESILSVCSRVLQEIRENM 405
              + T++D  IL       Q + +++
Sbjct: 648 ERSSLTDADRWILDRLEATRQYVDKSL 674



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  +  PN   Q H+GHA +  I D LAR  R+ G +VL+  G D  G       +    
Sbjct: 71  SIVLPPPNVTGQLHMGHALDHTIMDALARQKRMQGYEVLWLPGMDHAGIATQTKVEALLK 130

Query: 68  TT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
            T                     K + ++     R + D LD S + F  T ++      
Sbjct: 131 ETEGKDRFDYGREEFVDKVWSWKKDYAERIGNQMRALGDSLDWSRERF--TLDEGLSRAV 188

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQ 148
           + ++KK+ D+G IY+      +S + E   +D E VY   +G+
Sbjct: 189 QTMFKKLYDQGLIYRANRMVNWSPKLETAISDIEVVYSDDEGE 231


>gi|297170542|gb|ADI21570.1| isoleucyl-tRNA synthetase [uncultured verrucomicrobium
           HF0070_35E03]
          Length = 928

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 65/274 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E++G  +  S  +D+LLS +E      LP E +++V+   K G   L            
Sbjct: 497 IEQQGTDYWFSTSEDELLSGFE------LPAEWKDKVL---KKGTDTLD----------- 536

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
                     VWID+  ++ +     +N + +    WPADL++ G D  R  F +  W A
Sbjct: 537 ----------VWIDSGCSHRSVLK--ENAEVT----WPADLYLEGSDQHRGWFQSSLWTA 580

Query: 278 FLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +   + P  +++ +HGF++   G KISKS G        + + G D LR ++     C 
Sbjct: 581 MVSFGDAPY-RRILTHGFVVDGDGRKISKSDGKPQTADSYVTKYGADVLRLWV-----CS 634

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D          R +  L++ I   V RS   +       + T   F+  +  +      
Sbjct: 635 EDF---------RRDIPLSDEILGQVVRSYRTLRNTIRFQLGTLDDFSWGENRV------ 679

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
              EI E   + +   ALAQ   LV EV + F+A
Sbjct: 680 ---EISE--MDMIDRWALAQSAELVDEVTKAFEA 708


>gi|313158306|gb|EFR57708.1| leucine--tRNA ligase [Alistipes sp. HGB5]
          Length = 918

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+ A  H+GH    I +D+ +R+ R  G +VL   G D  G    + A
Sbjct: 30  RPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRQKGFNVLHPMGYDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    V  +QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPAVTTEQNIARYREQLDKIGFSFD 119



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 93/220 (42%), Gaps = 38/220 (17%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W      A   L    +  G+ +   EK+SKS  NV++P  ++
Sbjct: 653 DVNIVRNDILDIDAFRAWMPEYKDAEFILEDGKYVCGWAI---EKMSKSFYNVVNPDYIV 709

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E  G D LR + +      +   +D +G+         +G+   + R    +  D DG +
Sbjct: 710 ENYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVYKFL-RRFWRLFYDRDGRL 759

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                  ++DE  L    + ++++ E+++N   + +++  +  ++E+          E  
Sbjct: 760 IVTD--EKADEKELRTLHKTIKKVSEDIENFSFNTSVSAFMICLNELG---------ECN 808

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K              E+I  L +LL  F P +A +++  L
Sbjct: 809 KR-------------EIIEPLTVLLAPFAPHIAEELWAAL 835


>gi|294668215|ref|ZP_06733322.1| valine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309923|gb|EFE51166.1| valine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 945

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|261391710|emb|CAX49159.1| valyl-tRNA synthetase (valine--tRNA ligase; ValRS) [Neisseria
           meningitidis 8013]
          Length = 945

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|225025311|ref|ZP_03714503.1| hypothetical protein EIKCOROL_02209 [Eikenella corrodens ATCC
           23834]
 gi|224941929|gb|EEG23138.1| hypothetical protein EIKCOROL_02209 [Eikenella corrodens ATCC
           23834]
          Length = 945

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|289595832|ref|YP_003482528.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533619|gb|ADD07966.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1024

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAI 273
           G ++  +P Y++ VW D+ +       Y  +N D  +  F P D      D  R  F+ +
Sbjct: 501 GKEMKREP-YLIDVWFDSGSAPFAQFHYPYENKDEFERSF-PVDFITEALDQTRGWFYTL 558

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              + ++    P  K V + G IL + GEK+SKS GN +DP+E++  VG DA+R +    
Sbjct: 559 MAISTVVFNRAPY-KNVLTLGLILDEDGEKMSKSKGNAVDPMEIMNNVGADAVRLY---- 613

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTP-GA 382
                  FY     K R  ++  N +     +++  +   Y         D   P   G 
Sbjct: 614 -------FYSTPVWKSRRFSE--NLVREYAQKTLMTLWNVYVFFKNNASLDNFTPDKIGE 664

Query: 383 F-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
              E D  +LS  +  + E+R+N+ +  IH+A   +   + E+  ++
Sbjct: 665 IKNELDSWLLSRLNTTIVEVRKNLDSLDIHKATKAIEVFIDELSNWY 711



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIA-KAAQNAGVTTKVFVD 74
           N  PHIGHA    + D++ R+  +DG D+  +  G D HG  +  +  +  G+ +K  ++
Sbjct: 49  NGMPHIGHALTRSVKDIILRYKAMDGYDIQPWIGGWDCHGLPVEIEVEKKLGINSKREIE 108

Query: 75  Q-NSRNFRDMADVLDISY-DDFIRTTEK 100
           +   R F  +       Y D++I+ T++
Sbjct: 109 KFGIREFNKLCRESVFKYRDEWIKMTKR 136


>gi|241667174|ref|ZP_04754752.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875726|ref|ZP_05248436.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841747|gb|EET20161.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 935

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K+  +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DIDKSLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  +    D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIVKSKTLSGYDAPYIPTWDCHGLPI 102


>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511506|sp|C5CHA1|SYI_KOSOT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 921

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 14/109 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           I+ VW+D+ +++      +D     + +F PAD+++ G D  R    +  + LLS     
Sbjct: 521 ILDVWVDSGSSFEAVVKVMD-----ELRF-PADVYIEGSDQHR--GWFQSSLLLSVGTEG 572

Query: 285 --PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P  K V +HGFI   +G K+SKSLGN +DP E+  + G + LR ++ 
Sbjct: 573 VAPF-KSVITHGFINDEQGRKMSKSLGNAVDPQEINNKYGAEILRLWVA 620


>gi|57867200|ref|YP_188890.1| leucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|71153179|sp|Q8CNU8|SYL_STAES RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71153568|sp|Q5HNF1|SYL_STAEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57637858|gb|AAW54646.1| leucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 804

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ V    DG      H PV     + +  +++ Y D+LL
Sbjct: 150 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLL 202



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++   G D LR + +          + + GL         +G  
Sbjct: 574 NEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGPLDAAIAWSEKGL---------DGSR 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ D + +         ++ S+  V ++ ++++ E+      + A++Q++ 
Sbjct: 625 RFLDRVWRLIITDENSI--NKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMV 682

Query: 420 LVSEVDRYFDAQKPW 434
            ++E  +  +  KP+
Sbjct: 683 FINECYKTNEVYKPY 697


>gi|329725485|gb|EGG61965.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 805

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ V    DG      H PV     + +  +++ Y D+LL
Sbjct: 151 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLL 203



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL   
Sbjct: 515 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGES 574

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++   G D LR + +          + + GL         +G  
Sbjct: 575 NEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGPLDAAIAWSEKGL---------DGSR 625

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ D + +         ++ S+  V ++ ++++ E+      + A++Q++ 
Sbjct: 626 RFLDRVWRLIITDENSI--NKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMV 683

Query: 420 LVSEVDRYFDAQKPW 434
            ++E  +  +  KP+
Sbjct: 684 FINECYKTNEVYKPY 698


>gi|325145371|gb|EGC67648.1| valyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325205267|gb|ADZ00720.1| valyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 945

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|291001119|ref|XP_002683126.1| predicted protein [Naegleria gruberi]
 gi|284096755|gb|EFC50382.1| predicted protein [Naegleria gruberi]
          Length = 1051

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P DL V GKD+++ H   +  +  +A  P  +P  +F++G+++  GEK+SK  GN + 
Sbjct: 659 WYPVDLRVSGKDLIKNHLTMF-LYNHAAIFPDQMPGSIFANGYVMVNGEKMSKQAGNFLT 717

Query: 313 PIEVIEEVGVDALRYFLV 330
              VIE  G DA R  L 
Sbjct: 718 LQGVIEMYGADATRLALC 735



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +EK + +    Y N + H+GHA+ M  A+   RF RL G +VLF  G    G  IA 
Sbjct: 47  LENKEKFFATFPYPYMNGRLHLGHAFSMTKAEFQTRFQRLLGKNVLFPFGFHCTGMPIAA 106

Query: 61  AA 62
            A
Sbjct: 107 CA 108


>gi|121606119|ref|YP_983448.1| isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595088|gb|ABM38527.1| Isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 944

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 24/261 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T    T  ++     ++   WPADL++ G D  R  FH+    A  +  + 
Sbjct: 554 ILDVWFDSGT----THDHVLRHSHAEQSAWPADLYLEGHDQHRGWFHSSLLTACAMYDHA 609

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + +HGF +  KG K+SKS GNV+ P  V  ++G + +R +       G     DK
Sbjct: 610 PY-KGLLTHGFTVDGKGRKMSKSEGNVVAPQAVSGKLGAEIIRLWCASTDYSGDLAIDDK 668

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTP-GAFTESDESILSVCSRVLQEI 401
             +  RV  D    I N + R +   + D+D  +   P G   E D   LS  +++  +I
Sbjct: 669 --ILARV-VDAYRRIRNTL-RFLMANVSDFDPALDAVPFGEMLEIDRYALSRAAQLQADI 724

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-VTVE 453
             + +    H  ++++    SE     Y D  K   L  T P       A T L+ +T  
Sbjct: 725 LAHYEVYEFHPVVSKLQIYCSEDLGSFYLDILKD-RLYTTGPKSLARRSAQTALHAITHA 783

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           ++R +A  L +F  + A KIF
Sbjct: 784 MLRWMAPFL-SFTAEEAWKIF 803



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 14/131 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N Q HIGHA   I+ D++ +  +L GLD ++  G D HG  I  A + 
Sbjct: 53  EKFVLHDGPPYANGQIHIGHAVNKILKDMIVKARQLKGLDAIYVPGWDCHGLPIENAIEK 112

Query: 65  --AGVTTKVFVDQNSRNFR------DMADVLDIS----YDDFIRTTE-KRHHDTCRILWK 111
                  +  V   SR F        MAD   +     +D+  RT +        R L K
Sbjct: 113 LYGRSLPRDEVQAKSRAFATEQIAGQMADFKRLGVLGEWDNPYRTMDFGNEAQEIRAL-K 171

Query: 112 KISDKGDIYKG 122
           +I ++G +Y+G
Sbjct: 172 RIMERGFVYRG 182


>gi|306821338|ref|ZP_07454947.1| leucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550625|gb|EFM38607.1| leucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 807

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+ Q  H+GH       D++AR  RL+G +VL+  G D  G      
Sbjct: 34  DKQKFYPLVEFPYPSGQGLHVGHPRSYTALDIIARKKRLEGYNVLYPIGWDAFGLPTENY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K     N  NF+     L +S+D    I TT+  ++   + ++ K+ + G  
Sbjct: 94  AIKHKIHPKKVTQDNIANFKRQLKSLGLSFDWSREINTTDPSYYKWTQWIFLKLFEHGLA 153

Query: 120 YK 121
           YK
Sbjct: 154 YK 155



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 29/163 (17%)

Query: 270 FHAIYWPAFL-----LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
            ++ +W  FL     ++   P  ++  SHG IL   G+K+SKSLGNV++P E+++  G D
Sbjct: 548 LYSRFWHKFLYDIGEVTTKEPYARRT-SHGMILGENGQKMSKSLGNVVNPDEIVDTYGAD 606

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPG 381
             R +   E+  G    ++K   K   ++    G    V R  +M  ++ D         
Sbjct: 607 TFRTY---EMFIGD---FEK---KAPWSSQSIKGSFRFVERLWNMQELVTD--------- 648

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
               S E I    ++ ++++ E+ +N   + A+A +++ ++EV
Sbjct: 649 --ESSSEKIRKSLNKTIKKVSEDYENLKANTAIAAMMAFLNEV 689


>gi|262184706|ref|ZP_06044127.1| valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 912

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 18/132 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-----------RFH 271
           DP  ++  W  +     +T G+ +       KF+P ++ V   DIL            F 
Sbjct: 462 DPD-VLDTWFSSALWPFSTMGWPEKT-ADLEKFFPTNVLVTAYDILFFWVARMMMFGTFA 519

Query: 272 AIYWPAFLLSANLPLPKKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
             + P  L       P+  F+    HG +   +G K+SKSLGN IDP++ + + G DALR
Sbjct: 520 GAHTPELLGEGKNGRPQVPFTDIYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADALR 579

Query: 327 YFLVREIACGKD 338
           + L R    G D
Sbjct: 580 FTLARGANPGVD 591


>gi|227833699|ref|YP_002835406.1| Valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454715|gb|ACP33468.1| Valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 923

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 18/132 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-----------RFH 271
           DP  ++  W  +     +T G+ +       KF+P ++ V   DIL            F 
Sbjct: 473 DPD-VLDTWFSSALWPFSTMGWPEKT-ADLEKFFPTNVLVTAYDILFFWVARMMMFGTFA 530

Query: 272 AIYWPAFLLSANLPLPKKVFS----HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
             + P  L       P+  F+    HG +   +G K+SKSLGN IDP++ + + G DALR
Sbjct: 531 GAHTPELLGEGKNGRPQVPFTDIYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADALR 590

Query: 327 YFLVREIACGKD 338
           + L R    G D
Sbjct: 591 FTLARGANPGVD 602


>gi|66360066|ref|XP_627207.1| valyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|46228614|gb|EAK89484.1| valyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
          Length = 1042

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 253 AKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGN 309
           + F+P  L   G DIL F    +   +F  +  LP  K ++ H  +   +G K+SKSLGN
Sbjct: 563 STFFPTTLLETGSDILFFWVARMVMLSFACTDKLPF-KTIYLHAMVRDSQGRKMSKSLGN 621

Query: 310 VIDPIEVIEEVGVDAL 325
           VIDPIE+IE + +D L
Sbjct: 622 VIDPIEIIEGISLDDL 637


>gi|304393180|ref|ZP_07375108.1| isoleucine--tRNA ligase [Ahrensia sp. R2A130]
 gi|303294187|gb|EFL88559.1| isoleucine--tRNA ligase [Ahrensia sp. R2A130]
          Length = 1002

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D+        WPADL++ G D  R  FH+    +       
Sbjct: 601 ILDVWFDSGSTHAFCLQQRDDLK------WPADLYLEGSDQHRGWFHSSLLESCGTRGRA 654

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P    V +HGF++ + G K+SKS GN + P +VI++ G D LR ++
Sbjct: 655 PY-DAVLTHGFVMAEDGTKMSKSKGNTVTPQDVIKQSGADILRLWV 699



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I
Sbjct: 49  KGRPKYVLHDGPPYANGNLHIGHALNKILKDIITRSFQMRGYDSNYVPGWDCHGLPI 105


>gi|304309975|ref|YP_003809573.1| Isoleucyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795708|emb|CBL43907.1| Isoleucyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 937

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + T    L+  D  +    PADL++ G D  R  F +    A  +    P  
Sbjct: 537 VWFDSGVTHSTV---LEQRDHLRV---PADLYLEGSDQHRGWFQSSLKTAVAMRGEAPY- 589

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K V +HGF +  +G+K+SKSLGNV+ P +V + +G D +R ++ 
Sbjct: 590 KAVLTHGFTVDQQGKKMSKSLGNVVSPQDVAKALGADVIRLWVA 633



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTK 70
           Y N   HIGHA   I+ DV+ +  RL G +  +  G D HG      + K    AGV  K
Sbjct: 59  YANGDIHIGHAVNKILKDVILKSRRLSGYNAPYVPGWDCHGLPIEHNVEKKFGKAGV--K 116

Query: 71  VFVDQNSRNFRDMA-DVLDISYDDFIR 96
           + V +  +  R+ A   ++    DFIR
Sbjct: 117 LPVAEFRQKCREYAMKQVEGQRKDFIR 143


>gi|298253129|ref|ZP_06976921.1| valyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532524|gb|EFH71410.1| valyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 925

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 23/225 (10%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFL 279
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L
Sbjct: 519 QDIMDTWATSSLTPQIVTRWEEPGEENQALFKATFPMDLRPQGQDIIRTWLFSTVDRAHL 578

Query: 280 LSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +  LP      S G+IL   HK  K+SKS GNV+ P + IEE G DA+RY+       G
Sbjct: 579 ENGCLPWKHAALS-GWILDPDHK--KMSKSKGNVVVPNKPIEEFGADAVRYWAT-SAKLG 634

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTES-DE 388
            D  YD+  +K  +   LA  + N    ++++  +D +  +  P +        TE  D 
Sbjct: 635 LDATYDEGQMK--IGRRLAIKLLNATKFALAIGREDDEHQVLEPASADWDFADVTEVLDR 692

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQK 432
           S+++  + V++   + +++    +AL  + +   E  D Y +  K
Sbjct: 693 SVMAKLASVIRTATDALESYEHSKALEAIETFFWEFCDDYIELAK 737



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARYKRMQGFDVFYPMGWDDNGLPTER 105

Query: 61  AAQN 64
             QN
Sbjct: 106 RVQN 109


>gi|110677466|ref|YP_680473.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123066032|sp|Q16E06|SYL_ROSDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109453582|gb|ABG29787.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 848

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N ++ RD    L +S D   +F  T +  ++   + L+    + G +
Sbjct: 90  MAIGGHPKDWTYGNIKDMRDQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLEAGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  + D     +++V +G  G    A    V+  E   +FF++S + ++LLS
Sbjct: 149 YRKNAIVNWDPV-DMTVLANEQVEQGR-GWRSGAL---VERRELTQWFFKISDHSEELLS 203

Query: 179 YYES 182
             ++
Sbjct: 204 ALDT 207


>gi|281366294|ref|NP_648837.2| CG5414 [Drosophila melanogaster]
 gi|272455213|gb|AAF49539.2| CG5414 [Drosophila melanogaster]
          Length = 941

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+ + +    G        K K   ADL++ G D  +F   +  + L+S  A  
Sbjct: 562 ILDIWFDSGSTWSAVLG--------KDKI--ADLYLEGYD--QFTGWFQSSLLMSIAARE 609

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P K +F HGF +  KG K+SKSLGNVI P ++ ++ G DALR+++ 
Sbjct: 610 CAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKKYGTDALRWWVA 657


>gi|270296793|ref|ZP_06202992.1| isoleucyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270272780|gb|EFA18643.1| isoleucyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 1162

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|89890000|ref|ZP_01201511.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89518273|gb|EAS20929.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 1136

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +   +   Y  +N +  + +   AD    G D  R  F+ ++  A ++S ++  
Sbjct: 609 VWFDSGSMPYSQWHYPFENKEQVENQLRKADFIAEGVDQTRGWFYTLHAIATMISDDVAY 668

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V S+G +L K G+K+SK LGN  DP E + + G DA R+++V       +  +D DG
Sbjct: 669 -KNVVSNGLVLDKNGQKMSKRLGNAADPFETLGKYGADATRWYMVSNANPWDNLKFDLDG 727

Query: 346 L 346
           +
Sbjct: 728 I 728


>gi|54020318|ref|YP_115548.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823564|sp|Q602B7|SYI_MYCH2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53987491|gb|AAV27692.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 886

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 35/269 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       + P        P D++  G D  R  F++    + +     
Sbjct: 518 ILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSVIYFGFS 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KK+ SHGF++  KG K+SKS GN +DP+ ++ + G D  R ++        D  Y +
Sbjct: 570 PY-KKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANS-EYYNDIVYSE 627

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++ V       I   +  +V  ++ +     P     TE D  I +   ++  EI +
Sbjct: 628 AIFEQNVE------IYRKIRNTVRFLITNLADFKPKKYELTEVDLYIFNKIQKLKNEIIQ 681

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF--------DAQKPWELKKTNPDRASTVLYVTVEVI 455
           N       R +  + + + E   ++         A K   LK+        V Y   E++
Sbjct: 682 NYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKEESLKR------RQVQYNLYELL 735

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           + L I +   +P  A +I+   F+   N+
Sbjct: 736 QVLNIAIAPIMPTTAEEIYS--FIQKNNK 762



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I  K     G  + + +
Sbjct: 61  YANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEI 120

Query: 74  DQNSRNFRD---MADV-------LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + S +F +   +A +       L   +    +T    +      L+KK+  +G +Y+  
Sbjct: 121 RRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRAL 180

Query: 124 YSGWYSLRDEAYYNDDEV 141
              ++S   ++   + E+
Sbjct: 181 KPVYWSPSSQSALAEAEI 198


>gi|25028838|ref|NP_738892.1| valyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494124|dbj|BAC19092.1| putative valyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 939

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 109/275 (39%), Gaps = 28/275 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDIL-----------R 269
           DP  ++  W  +     +T G+   PD +    KF+P  + V   DIL            
Sbjct: 495 DPD-VLDTWFSSALWPFSTMGW---PDKTPELDKFYPTSVLVTAYDILFFWVARMMMFGT 550

Query: 270 FHAIYWPAFLLSANLPLPKKVFS----HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
           F A   P  L       P+  F+    HG +  + G K+SKSLGN IDP++ ++  G DA
Sbjct: 551 FAAKETPELLGEGTDGRPQVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVDNYGADA 610

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R    G D    +D  +   N   A  + N  +R   M     +G+ P     T
Sbjct: 611 LRFTLARGANPGVDLPVGEDSAQSSRN--FATKLFN-ATRFALMNGAVSEGL-PERAELT 666

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
           ++D  IL     V   + + + N    +A  ++         D Y +  K    ++   +
Sbjct: 667 DADRWILDRLEEVRGHVDDYLDNYQFAKANEELYHFAWNEFCDWYLEIAKVQIPREGVTE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R      V   V+  L  LL   +P +   ++  L
Sbjct: 727 RGRNTQQVLGHVLDALLRLLHPAMPFVTEVLWKAL 761



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 26/175 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN   Q H+GHA +  + D LAR  R+ G +VL+  G D  G       
Sbjct: 86  EKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKV 145

Query: 56  QKIAKAAQNAG---VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKR 101
           +++ K  +       + + F+++                R + D +D S + F  T ++ 
Sbjct: 146 EEMLKETEGKSRYDYSREEFIEKVWEWKKEYGGKIGEQMRAIGDSVDWSRERF--TLDEG 203

Query: 102 HHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                + ++KK+ D G IY+      W  + + A  + + VYK  +G+  + ++ 
Sbjct: 204 LSRAVQTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYG 258


>gi|317480151|ref|ZP_07939261.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316903698|gb|EFV25542.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 1162

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|294155468|ref|YP_003559852.1| isoleucine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600367|gb|ADE19863.1| isoleucine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 888

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+      +T    + +G K    P D+++ G D  R  F++    +   S   
Sbjct: 518 IMDVWFDS-----GSTSIAVDIEGVKQ---PYDVYLEGIDQYRGWFNSSIINSVAYSGKS 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K + SHGF+L  KGEK+SKS GN+I P++V+++ G D LR
Sbjct: 570 PY-KTLISHGFVLDGKGEKMSKSKGNIISPLDVVKKNGADILR 611



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKIAKAAQNAGVTT 69
           Y N   H+GHA   I+ D++ R+  L G    +  G D HG     + + +A  N    T
Sbjct: 58  YANGDLHVGHALNKILKDIIVRYKSLRGFYSPYVPGWDTHGLPIEHKMLEEAKLNKDELT 117

Query: 70  KVF------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            +             +D   + F+ +   +  +++D   T  K        L+KK+   G
Sbjct: 118 PLILRKKAAKYAFKQIDNQRKQFKTLQ--MLSNFEDIYITMNKSFEAKQLKLFKKMVLDG 175

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            ++KG    ++S   ++   + EV
Sbjct: 176 LVFKGLKPVYWSPSSQSALAEAEV 199


>gi|293391734|ref|ZP_06636068.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952268|gb|EFE02387.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 940

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G  A     D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYSSVVANRPEFEGKAA-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GNV+ P EV+++ G D LR ++     
Sbjct: 575 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNVVTPQEVMDKFGGDILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 635 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPQRDAVKPEEMISLDRW 687

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 688 AVACALEAQNEIKDAYDNYQFHAVVQRLMRFCS 720


>gi|256825553|ref|YP_003149513.1| leucyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688946|gb|ACV06748.1| leucyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 984

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K+ I     YP+ A  H+GH    I  DV AR+ R  G +VL+T G D  G    + A
Sbjct: 58  RPKVMIQDMFPYPSGAGLHVGHPLGFIATDVYARYQRTTGRNVLYTMGFDAFGLPAEQYA 117

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   +   + N   +R     L +S+DD
Sbjct: 118 VATGQHPRTTTEANMETYRRQLRQLGLSHDD 148


>gi|169631996|ref|YP_001705645.1| leucyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169243963|emb|CAM64991.1| Leucyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 951

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 9/125 (7%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+    H+GH    I  DV ARFHR+ G +VL   G D  G    + A 
Sbjct: 61  DKMFVQDMFPYPSGDGLHVGHPLGYIATDVYARFHRMRGANVLHALGFDAFGLPAEQYAV 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G   +V  + N  N++     L + +D       +R   T  + + K +    I+   
Sbjct: 121 QTGTHPRVRTEANIVNYKRQLGRLGLGHD------SRRSFATTDVDFYKWTQW--IFLQI 172

Query: 124 YSGWY 128
           Y+ WY
Sbjct: 173 YNAWY 177


>gi|58585043|ref|YP_198616.1| valyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311597|sp|Q5GRK0|SYV_WOLTR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58419359|gb|AAW71374.1| Valyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 855

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 30/275 (10%)

Query: 220 IPDDPQYIMYVW-IDALT---NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
           +PD  Q +M  W   A+T   + L        PD      +PADL     +I+R  A Y 
Sbjct: 488 VPD--QDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLRSQSHEIIRTWAFYT 545

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A+  + +LP    + S   +    +K+SKS GN+I P  +++  G D +RY+     
Sbjct: 546 ILKAYYHANSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTANS- 604

Query: 334 ACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESI 390
             G D  Y ++ LK  KR+   L N      S+ VS+ ++ Y  +  +  + +E+ D+ I
Sbjct: 605 RLGVDTVYSENILKIGKRLVTKLWNA-----SKFVSIFMERYQAV--SINSVSETMDQWI 657

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-----KKTNPDR 443
           LS   +V+++   N+       AL  V     +   D Y +  K          K N   
Sbjct: 658 LSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSA 717

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             ++ YV   ++R    LL  F+P +  +I+  L+
Sbjct: 718 KQSLTYVLNTILR----LLAPFLPYITEQIYHQLY 748



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 13/104 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           K+     I T     + + HIGH +     D +ARF R+ G D+ +  G D++G      
Sbjct: 30  KKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERL 89

Query: 56  --QKIAKAAQNAGVTTKV-----FVDQNSRNFRDMADVLDISYD 92
             Q     A+  G    +      ++++ + F+++   + ISYD
Sbjct: 90  VEQTYKTRAREVGREKFIEMCHEVIEKSKQEFKELLRSVGISYD 133


>gi|289424598|ref|ZP_06426381.1| isoleucine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289155295|gb|EFD03977.1| isoleucine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 1121

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 57/297 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGN-----LVSRS 365
                 VR++                 +G+    G +   +AD A G G      L+  S
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGSSPPLLMRSS 739

Query: 366 VSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +  +   G++P   A TE    D  ++S  + +++++ E + N    R    +   V 
Sbjct: 740 PPLWARGVRGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFVD 797

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 ELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 850


>gi|255690192|ref|ZP_05413867.1| isoleucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624306|gb|EEX47177.1| isoleucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 1162

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGIEE 756


>gi|254571747|ref|XP_002492983.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia
           pastoris GS115]
 gi|238032781|emb|CAY70804.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia
           pastoris GS115]
          Length = 1072

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +     +T G+ DN    K +F+P  +   G DIL F    +      L+ ++
Sbjct: 593 VLDTWFSSGLWPFSTLGWPDNTPDMK-QFYPFSMLETGWDILFFWVTRMILLGLKLTGDV 651

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGK 337
           P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      RE+   K
Sbjct: 652 PF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVINGISLEDLHAKLLGGNLDPREVEKAK 710

Query: 338 DG 339
            G
Sbjct: 711 KG 712


>gi|212692482|ref|ZP_03300610.1| hypothetical protein BACDOR_01978 [Bacteroides dorei DSM 17855]
 gi|265752725|ref|ZP_06088294.1| leucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664957|gb|EEB25529.1| hypothetical protein BACDOR_01978 [Bacteroides dorei DSM 17855]
 gi|263235911|gb|EEZ21406.1| leucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 944

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +    N   +R+  D +  S+  D  +RT E  ++
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWDREVRTCEPGYY 132



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDTEAFKAWRPEYNNAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  ++     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYSRTDEFL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P     T+ +   L    ++++++  +++    + +++  +  V+E+           LK
Sbjct: 785 PVESEPTKEE---LKAIHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLK 832

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             N            EV+  L ILL  F P  A ++++ L
Sbjct: 833 CRNK-----------EVLSNLIILLAPFAPHYAEELWEAL 861


>gi|254444046|ref|ZP_05057522.1| leucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258354|gb|EDY82662.1| leucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 871

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 64/328 (19%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSA-------------YQDKLLSYYE-SHPEFILPIERR 193
           Q Y  +  P+ W+ +E Y   +++             Y D+  + Y    P   LP+E  
Sbjct: 440 QRYWGEPFPIAWVSKEDYVTAVASGTLADWLPAEPVTYTDETGTVYALPVPPSSLPLELP 499

Query: 194 NEVISFVKSGLKDLSLSRKTFDW---------GIKIP---DDPQYIMYVWIDALTNYLTT 241
             V S+  +G  +  L +K  DW         G  +P   + P+  M+V     TN +  
Sbjct: 500 Y-VESYEPAGTGESPL-KKADDWMEIWYNFATGAYVPASGEKPEGEMWVRASRETNTMPQ 557

Query: 242 TG--------YLD--NPDGSKA----KFWPA-DLHVIGKDILRFHAIY---WPAFLLSAN 283
                     Y+D  N D   +    ++W   D++V G +    H +Y   W   L  A 
Sbjct: 558 WAGSCWYYLRYMDPHNEDALASPEALEYWKTPDMYVGGAEHAVLHLLYARFWHKVLYDAG 617

Query: 284 L-----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +     P  +K+F  G +L + G+KISKS GN +DP+ V+ E G D +R +L+       
Sbjct: 618 VVKNKEPF-RKLFHQGMLLGEDGKKISKSAGNGVDPVSVVNEYGADTMRMYLM------- 669

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSR 396
             F      +K  N+    GI   ++++   I+ KD +        + +S E+   +   
Sbjct: 670 --FLGPLEARKPWNSKGIGGISRFLNKAWREIVGKDGELNSKIQDGYQDSKET-EKLLHE 726

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV 424
            ++++ E++     + A++Q++ L++ +
Sbjct: 727 TIKKVSEDLDALSFNTAISQLMILINHL 754



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK ++     YP+ A  HIGH      +D+LAR+ R  G +VL   G D  G    + 
Sbjct: 49  DKEKFFVLDMFPYPSGAGLHIGHPLGYTGSDILARYKRAQGKNVLHPIGWDAFGLATEQY 108

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +   +FR     +  S  YD  + TT+ +++   + ++ ++  +G  
Sbjct: 109 AIKTGKHPRTTSVERIGHFRKQLKTIGFSFDYDREVDTTDPKYYRWTQWIFLQLFKRGLA 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y      W+    +    ++EV    DG+     H PV          +++ Y D+L+
Sbjct: 169 YVDMRPVWWCDELKTVLANEEVI---DGKSERGNH-PVVRRNLRQVVLKITEYADRLI 222


>gi|160888272|ref|ZP_02069275.1| hypothetical protein BACUNI_00682 [Bacteroides uniformis ATCC 8492]
 gi|156862218|gb|EDO55649.1| hypothetical protein BACUNI_00682 [Bacteroides uniformis ATCC 8492]
          Length = 1162

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|111020611|ref|YP_703583.1| leucyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123144813|sp|Q0SAL1|SYL_RHOSR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110820141|gb|ABG95425.1| leucine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 945

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV AR+HR+ G +VL T G D  G    + A 
Sbjct: 57  DKLFVQDMFPYPSGTGLHVGHPLGYIATDVFARYHRMQGHNVLHTLGYDAFGLPAEQYAV 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N  N +     L + +D+
Sbjct: 117 QTGTHPRTTTEANIVNMKRQLRRLGLGHDE 146


>gi|332176779|gb|AEE12469.1| leucyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 938

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 36/218 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D+H++  DIL   A   W   L  A  +      +  GF +   EK+SKS+ NVI+P E+
Sbjct: 661 DIHLVQNDILDQEAFRQWRDDLHDATFITEADGSYLCGFAV---EKMSKSMFNVINPDEI 717

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G D LR + +      +   +D +G+         +G+   + R V  +  D +G 
Sbjct: 718 IEQYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVYRFLKR-VWSLYHDGEGQ 767

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +    +   S E + ++  +++Q+I ++++    + +++  +  V E+ +   AQ     
Sbjct: 768 LTVSASAQASREELRTI-HKLIQKITQDIERLSFNTSVSAFMIAVGELQK---AQT---- 819

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                         ++EV+R L ILL  F P +A  ++
Sbjct: 820 -------------TSLEVLRPLVILLSPFAPHIAEMLW 844



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----Q 56
           +++   Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D  G    Q
Sbjct: 28  RDKPSYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGYNVLHPMGYDAFGLPAEQ 87

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  ++   TT+V    N   +R+  D +   +D
Sbjct: 88  YAIQTNRHPEETTRV----NIARYREQLDNIGFGFD 119


>gi|325133087|gb|EGC55759.1| valyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139065|gb|EGC61611.1| valyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 945

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|261868577|ref|YP_003256499.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413909|gb|ACX83280.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 940

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G  A     D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYSSVVANRPEFEGKAA-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GNV+ P EV+++ G D LR ++     
Sbjct: 575 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNVVTPQEVMDKFGGDILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 635 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPQRDAVKPEEMISLDRW 687

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 688 AVACALEAQNEIKDAYDNYQFHAVVQRLMRFCS 720


>gi|256761761|ref|ZP_05502341.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683012|gb|EEU22707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 928

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 524 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 578 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 630

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCS 395
                RV+ D+ N +  +   +  ++  +L +     P       +     D+ +    +
Sbjct: 631 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTLRLN 686

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+QEIREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 687 QVIQEIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 746 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 777



 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 60  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 119

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 120 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 180 KGLKPIYWSPSSESSLAEAEI 200


>gi|90103532|sp|Q8FN65|SYV_COREF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 903

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 109/275 (39%), Gaps = 28/275 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDIL-----------R 269
           DP  ++  W  +     +T G+   PD +    KF+P  + V   DIL            
Sbjct: 459 DPD-VLDTWFSSALWPFSTMGW---PDKTPELDKFYPTSVLVTAYDILFFWVARMMMFGT 514

Query: 270 FHAIYWPAFLLSANLPLPK----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
           F A   P  L       P+     +F HG +  + G K+SKSLGN IDP++ ++  G DA
Sbjct: 515 FAAKETPELLGEGTDGRPQVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVDNYGADA 574

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R    G D    +D  +   N   A  + N  +R   M     +G+ P     T
Sbjct: 575 LRFTLARGANPGVDLPVGEDSAQSSRN--FATKLFN-ATRFALMNGAVSEGL-PERAELT 630

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
           ++D  IL     V   + + + N    +A  ++         D Y +  K    ++   +
Sbjct: 631 DADRWILDRLEEVRGHVDDYLDNYQFAKANEELYHFAWNEFCDWYLEIAKVQIPREGVTE 690

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R      V   V+  L  LL   +P +   ++  L
Sbjct: 691 RGRNTQQVLGHVLDALLRLLHPAMPFVTEVLWKAL 725



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 26/175 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN   Q H+GHA +  + D LAR  R+ G +VL+  G D  G       
Sbjct: 50  EKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKV 109

Query: 56  QKIAKAAQNAG---VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKR 101
           +++ K  +       + + F+++                R + D +D S + F  T ++ 
Sbjct: 110 EEMLKETEGKSRYDYSREEFIEKVWEWKKEYGGKIGEQMRAIGDSVDWSRERF--TLDEG 167

Query: 102 HHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                + ++KK+ D G IY+      W  + + A  + + VYK  +G+  + ++ 
Sbjct: 168 LSRAVQTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYG 222


>gi|57157205|dbj|BAD83632.1| valyl tRNA synthetase [Encephalitozoon hellem]
          Length = 600

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 20/129 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILHK-GEKISKSL 307
           +++P+ L   G DIL F    W A ++   L L  KV     F HG +    G K+SKSL
Sbjct: 464 RYYPSTLLETGSDILFF----WVARMVMLGLELTGKVPFSQVFLHGIVRDAHGRKMSKSL 519

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR---VNADLANGIGNLVSR 364
           GNVIDPI VI+   ++ L       I+  + G  D+  +K+    +  D  NGI    + 
Sbjct: 520 GNVIDPIFVIDGCSLEKL-------ISTMRSGNLDEKEMKRAESVLKQDFPNGIPRCGAD 572

Query: 365 SVSMILKDY 373
           ++   L  Y
Sbjct: 573 ALRFTLLSY 581



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
          HIGHA  + I D L R+ R+ G +VL+  GTD  G     A QN  V +K    + +R  
Sbjct: 3  HIGHAMMVSIQDTLCRYKRMCGHEVLYIPGTDHAGI----ATQN--VVSKQMEKEGTRVD 56

Query: 81 RD 82
          R+
Sbjct: 57 RE 58


>gi|229134705|ref|ZP_04263514.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648751|gb|EEL04777.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 921

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L   G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGDGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|150003718|ref|YP_001298462.1| leucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254881052|ref|ZP_05253762.1| leucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319640059|ref|ZP_07994786.1| leucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166230610|sp|A6KZH6|SYL_BACV8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149932142|gb|ABR38840.1| leucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254833845|gb|EET14154.1| leucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317388337|gb|EFV69189.1| leucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 944

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            A   G    +    N   +R+  D +  S+D    +RT E  ++
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREVRTCEPGYY 132



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W      A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDVEAFKAWRPEYNDAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  ++     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYSRTDEFL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G  T+ +   L    ++++++  +++    + +++  +  V+E+           LK
Sbjct: 785 PVEGEPTKEE---LKAIHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLK 832

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             N            EV+  L ILL  F P  A ++++ L
Sbjct: 833 CRNK-----------EVLSNLIILLAPFAPHYAEELWEAL 861


>gi|78484840|ref|YP_390765.1| isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363126|gb|ABB41091.1| Isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 943

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++ T     D          PADL++ G D  R  F +    A   +   
Sbjct: 537 ILDVWFDSGISHFTVLNQRDELST------PADLYLEGSDQHRGWFQSSLLTALATNGEA 590

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V +HGF + K G+K+SKS GNV+ P ++  + G D LR ++ 
Sbjct: 591 PY-KQVLTHGFTVDKDGKKMSKSKGNVVAPQDIANKYGADILRLWIA 636



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----- 55
           M  R K  +     Y N   HIGHA   ++ D++ +   L G D  F  G D HG     
Sbjct: 46  MAGRPKFILHDGPPYANGNIHIGHAVNKVLKDMIVKSKGLSGFDAPFVPGWDCHGLPIEL 105

Query: 56  ---QKIAKAAQNAGVT 68
              +K  K  Q  G T
Sbjct: 106 NVEKKKGKVGQKIGAT 121


>gi|254168296|ref|ZP_04875142.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622805|gb|EDY35374.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1037

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Y++ VW D+ +       Y  +N D  +  F P D      D  R  F+ +   + ++  
Sbjct: 522 YLIDVWFDSGSAPFAQFHYPYENKDEFERSF-PVDFITEALDQTRGWFYTLMAISTVVFN 580

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K V + G IL + GEK+SKS GN +DP+E++  VG DA+R +           FY
Sbjct: 581 RAPY-KNVLTLGLILDEDGEKMSKSKGNAVDPMEIMNNVGADAVRLY-----------FY 628

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTP-GAF-TESDESI 390
                K R  ++  N +     +++  +   Y         D   P   G    E D  +
Sbjct: 629 STPVWKSRRFSE--NLVREYAQKTLMTLWNVYVFFKNNASLDNFTPDKIGEIKNELDSWL 686

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           LS  +  + E+R+N+ +  IH+A   +   + E+  ++
Sbjct: 687 LSRLNTTIVEVRKNLDSLDIHKATKAIEVFIDELSNWY 724



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIA-KAAQNAGVTTKVFVD 74
           N  PHIGHA    + D++ R+  +DG DV  +  G D HG  +  +  +  G+ +K  ++
Sbjct: 62  NGMPHIGHALTRSVKDIILRYKAMDGYDVQPWIGGWDCHGLPVEIEVEKKLGINSKREIE 121

Query: 75  Q-NSRNFRDMADVLDISY-DDFIRTTEK 100
           +   R F  +       Y D++I+ T++
Sbjct: 122 KFGIREFNKLCRESVFKYRDEWIKMTKR 149


>gi|170059338|ref|XP_001865320.1| isoleucyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878148|gb|EDS41531.1| isoleucyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 851

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           I+ +W D+  ++L+  G              ADL++ G D  +F   +  + L S    N
Sbjct: 475 ILDIWFDSGISWLSVLGRDRT----------ADLYLEGLD--QFTGWFQSSLLTSVAARN 522

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               + VF HGF + + G K+SKSLGN+I P +++++ G DALR+++ 
Sbjct: 523 TSPYRAVFVHGFAVDEHGMKMSKSLGNIISPKDIVKQYGCDALRWWVA 570


>gi|161507942|ref|YP_001577906.1| leucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260103261|ref|ZP_05753498.1| leucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|229470715|sp|A8YWU4|SYL_LACH4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160348931|gb|ABX27605.1| Leucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260082930|gb|EEW67050.1| leucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328464566|gb|EGF35935.1| leucyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 804

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P EVI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQK 689



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 22/257 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V    N  NF+   + L  SY  D  I T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPAVVTKNNIANFKRQLNKLGFSYDWDREITTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY D+LL
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRRNMRQWM------LKMTAYADRLL 201

Query: 178 SYYESH--PEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMY 229
              +    PE +  ++R      V + V   +KD   S KTFD     PD      Y + 
Sbjct: 202 EDLDDLDWPEPVKEMQRNWIGRSVGAQVTFKIKD---SDKTFDIFTTRPDTLFGCSYTVL 258

Query: 230 VWIDALTNYLTTTGYLD 246
              + L   +TT G+ D
Sbjct: 259 APENKLVQEITTDGHRD 275


>gi|323465976|gb|ADX69663.1| Leucyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 804

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P EVI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQK 689



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 22/257 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V    N  NF+   + L  SY  D  I T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPAVVTKNNIANFKRQLNKLGFSYDWDREITTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY D+LL
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGRTERGGYPVYRRNMRQWM------LKMTAYADRLL 201

Query: 178 SYYESH--PEFILPIERR---NEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMY 229
              +    PE +  ++R      V + V   +KD   S KTFD     PD      Y + 
Sbjct: 202 EDLDDLDWPEPVKEMQRNWIGRSVGAQVTFKIKD---SDKTFDIFTTRPDTLFGCSYTVL 258

Query: 230 VWIDALTNYLTTTGYLD 246
              + L   +TT G+ D
Sbjct: 259 APENKLVQEITTDGHRD 275


>gi|320583657|gb|EFW97870.1| Mitochondrial leucyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 850

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+Y +    YP+   H+GH     IADVLARF+R+ G +V+   G D  G     AA 
Sbjct: 36  KGKIYSTAMFPYPSGILHMGHLRVYTIADVLARFYRMQGYNVINPMGWDAFGLPAENAAV 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +  V+ + +   N    +   + +   +D        R   TC   + K + K  ++   
Sbjct: 96  DRNVSPEKWTKLNISKMKVQMEAMLADFD------WDREVTTCDPAYYKWTQK--LFLLM 147

Query: 124 YSGWYSLRDEAYYNDDEV 141
           Y   Y+ R +A  N D V
Sbjct: 148 YEHGYAYRKKAEINWDPV 165


>gi|319902175|ref|YP_004161903.1| Isoleucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417206|gb|ADV44317.1| Isoleucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 1163

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|259507900|ref|ZP_05750800.1| valine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259164534|gb|EEW49088.1| valine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 904

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 109/275 (39%), Gaps = 28/275 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDIL-----------R 269
           DP  ++  W  +     +T G+   PD +    KF+P  + V   DIL            
Sbjct: 460 DPD-VLDTWFSSALWPFSTMGW---PDKTPELDKFYPTSVLVTAYDILFFWVARMMMFGT 515

Query: 270 FHAIYWPAFLLSANLPLPK----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
           F A   P  L       P+     +F HG +  + G K+SKSLGN IDP++ ++  G DA
Sbjct: 516 FAAKETPELLGEGTDGRPQVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVDNYGADA 575

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L R    G D    +D  +   N   A  + N  +R   M     +G+ P     T
Sbjct: 576 LRFTLARGANPGVDLPVGEDSAQSSRN--FATKLFN-ATRFALMNGAVSEGL-PERAELT 631

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
           ++D  IL     V   + + + N    +A  ++         D Y +  K    ++   +
Sbjct: 632 DADRWILDRLEEVRGHVDDYLDNYQFAKANEELYHFAWNEFCDWYLEIAKVQIPREGVTE 691

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           R      V   V+  L  LL   +P +   ++  L
Sbjct: 692 RGRNTQQVLGHVLDALLRLLHPAMPFVTEVLWKAL 726



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 26/175 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------- 55
           EK   S  +  PN   Q H+GHA +  + D LAR  R+ G +VL+  G D  G       
Sbjct: 51  EKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKV 110

Query: 56  QKIAKAAQNAG---VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKR 101
           +++ K  +       + + F+++                R + D +D S + F  T ++ 
Sbjct: 111 EEMLKETEGKSRYDYSREEFIEKVWEWKKEYGGKIGEQMRAIGDSVDWSRERF--TLDEG 168

Query: 102 HHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                + ++KK+ D G IY+      W  + + A  + + VYK  +G+  + ++ 
Sbjct: 169 LSRAVQTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYG 223


>gi|256425193|ref|YP_003125846.1| valyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040101|gb|ACU63645.1| valyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 881

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 33/248 (13%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANL------PLPKKVFSHGFIL 297
           +  PD  +  ++ P ++ V G+DI+ F    W A ++ A        P     F+     
Sbjct: 478 ISQPDNEEINYYYPTNVLVTGQDIIFF----WVARMIMAGQEYRNEKPFSDVYFTGMVRD 533

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SK LGN  D +E+I++ G DA+RY ++     G D  +D   L+  + +  +N 
Sbjct: 534 KQGRKMSKQLGNSPDLLELIDKYGADAVRYGIMISSPAGNDLLFDDAALE--LGSKFSNK 591

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRA 413
           I N + + V M   +  G      A    D   +      L E++  +  +     ++ A
Sbjct: 592 IWNAL-KLVKMWEANTAG-----DANAAVDHFAVRWFESRLNEVKVQLAEEFADFKLNEA 645

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKL 469
           L  V SL+      +D    W L+   P       + +   TV    +L  LL  F+P +
Sbjct: 646 LKTVRSLI------WDDFCSWYLEWVKPGFEQPCDAGIYAKTVYFFEELMQLLHPFMPFV 699

Query: 470 ANKIFDIL 477
             +++ +L
Sbjct: 700 TEEVYQLL 707


>gi|229061501|ref|ZP_04198845.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717735|gb|EEL69385.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 921

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F++    A  ++   P  K V SHGF+L   G K+SKS+GN++ P
Sbjct: 546 PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPY-KGVLSHGFVLDGDGRKMSKSIGNIVVP 604

Query: 314 IEVIEEVGVDALRYFL 329
            ++++++G D LR ++
Sbjct: 605 KKIMDQLGGDILRLWV 620



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-------------------ISD 115
                FR +    + +Y+   R  E+      R  W                     ++ 
Sbjct: 115 MTVAEFRKLC--AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAK 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
           KG IYKG    ++S   E+   + E+
Sbjct: 173 KGYIYKGQKPVYWSPTSESALAEAEI 198


>gi|225181686|ref|ZP_03735126.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167667|gb|EEG76478.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 914

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ + ++       NPD +     PADL++ G D  R  F +    +       
Sbjct: 529 IMDVWFDSGSTHVAVLE--TNPDLTS----PADLYLEGSDQYRGWFQSSLLTSVATRDRA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K   +HG+++  +G+K+SKSLGNV+ P  +I++ G D LR ++
Sbjct: 583 PY-KSTLTHGWVVDGEGKKMSKSLGNVVAPEHIIKQYGADILRLWV 627



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 15/134 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK  +     Y N   H+GHA   ++ D++ +   + G D  +  G D HG  I     
Sbjct: 50  KEKYVLHDGPPYANGDIHMGHALNKVLKDIIVKHKSMSGFDSPYVPGWDTHGLPIEHQVV 109

Query: 64  NAGVTTKVFVD--QNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWK--------- 111
             G   +  V   +  R+ RD A   LDI  + F R   +   D   +  K         
Sbjct: 110 KKGKVKRNEVTPLEFRRHCRDYALRFLDIQREQFKRLGVRGDWDNPYVTLKPEFEARQIE 169

Query: 112 ---KISDKGDIYKG 122
              ++++KG IYKG
Sbjct: 170 VFGEMANKGYIYKG 183


>gi|223043792|ref|ZP_03613835.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442889|gb|EEE48991.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 916

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKGDIY 120
            +     ++ A   +DI   DF R   +   D   I            L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|317474659|ref|ZP_07933933.1| leucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909340|gb|EFV31020.1| leucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 955

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142


>gi|312600998|gb|ADQ90253.1| Isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 886

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 35/269 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       + P        P D++  G D  R  F++    + +     
Sbjct: 518 ILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSVIYFGFS 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KK+ SHGF++  KG K+SKS GN +DP+ ++ + G D  R ++        D  Y +
Sbjct: 570 PY-KKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANS-EYYNDIVYSE 627

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++ V       I   +  +V  ++ +     P     TE D  I +   ++  EI +
Sbjct: 628 AIFEQNVE------IYRKIRNTVRFLITNLADFKPKKYELTEVDLYIFNKIQKLKNEIIQ 681

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF--------DAQKPWELKKTNPDRASTVLYVTVEVI 455
           N       R +  + + + E   ++         A K   LK+        V Y   E++
Sbjct: 682 NYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKR------RQVQYNLYELL 735

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           + L I +   +P  A +I+   F+   N+
Sbjct: 736 QVLNIAIAPIMPTTAEEIYS--FIQKNNK 762



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I  K     G  + + +
Sbjct: 61  YANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEI 120

Query: 74  DQNSRNFRD---MADV-------LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + S +F +   +A +       L   +    +T    +      L+KK+  +G +Y+  
Sbjct: 121 RRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRAL 180

Query: 124 YSGWYSLRDEAYYNDDEV 141
              ++S   ++   + E+
Sbjct: 181 KPVYWSPSSQSALAEAEI 198


>gi|294777460|ref|ZP_06742911.1| leucine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294448528|gb|EFG17077.1| leucine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 944

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            A   G    +    N   +R+  D +  S+D    +RT E  ++
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREVRTCEPGYY 132



 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W      A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDVEAFKAWRPEYNDAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  ++     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYSRTDEFL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G  T+ +   L    ++++++  +++    + +++  +  V+E+           LK
Sbjct: 785 PVEGEPTKEE---LKAIHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLK 832

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             N            EV+  L ILL  F P  A ++++ L
Sbjct: 833 CRNK-----------EVLSNLIILLAPFAPHYAEELWEAL 861


>gi|260172788|ref|ZP_05759200.1| leucyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315921074|ref|ZP_07917314.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694949|gb|EFS31784.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 944

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|237722036|ref|ZP_04552517.1| leucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229448905|gb|EEO54696.1| leucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 944

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/220 (18%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  D+L   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDVLDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|227872317|ref|ZP_03990672.1| leucine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841824|gb|EEJ52099.1| leucine--tRNA ligase [Oribacterium sinus F0268]
          Length = 710

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 40/231 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISK 305
           K+ P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL   G K+SK
Sbjct: 430 KYLPVDMYIGGVEHAVLHLLYSRFWTKFLYDIGVVGFKEPFVKLFNQGMILGQNGIKMSK 489

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+ P +++ + G DALR + +       D  +D  G+         +G+   ++R 
Sbjct: 490 SMGNVVSPDDLVRDYGCDALRLYELFVGPPELDAEWDDRGI---------DGVYRFLNRF 540

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +++ +  D  I      + + E I     RV   +  ++Q +     L  V+S   E +
Sbjct: 541 YNLVEESKDKNI------SPTKEMI-----RVRHNLIHDIQLRFDSFNLNTVVSGFMEYN 589

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                           D A     V +E +R  ++LL  F P +A + + +
Sbjct: 590 NSL------------LDLAKKEGGVDLETLRSFSVLLAPFAPHIAEECYHL 628


>gi|193214471|ref|YP_001995670.1| isoleucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087948|gb|ACF13223.1| isoleucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 1078

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD    G D  R  F+ ++    L+  N P  K +  +G IL K G+K+SKS GNV+DP
Sbjct: 575 PADFIAEGVDQTRGWFYTLHAIGTLI-FNKPAYKNLIVNGHILDKDGQKMSKSKGNVVDP 633

Query: 314 IEVIEEVGVDALRYFLV 330
            E++ + G D+LR++L+
Sbjct: 634 FEMMSKYGADSLRWYLI 650


>gi|182419097|ref|ZP_02950351.1| leucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669189|ref|ZP_04529171.1| leucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377052|gb|EDT74622.1| leucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655076|gb|EEP52634.1| leucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 816

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 111/278 (39%), Gaps = 47/278 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P K  +H G IL   G K+S
Sbjct: 520 KILPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFKSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P E I+E G D  R +L+   A  + G +  DG+K                 
Sbjct: 579 KSKGNTISPDEYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK----------------- 621

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-----------IRENMQNQLIHRA 413
           SVS  ++  + ++ +      S E+I +      +E           + E+      + A
Sbjct: 622 SVSKFIERIERILESCREVINSTENIKTTVDSAEKELNFWKHTAIKGVTEDTDKMQFNTA 681

Query: 414 LAQVISLVSEVDRYF--DAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVP 467
           +A+++ L + +++Y   + + P  LK+T  D     A    +   E   QL      F  
Sbjct: 682 IARLMELTNALNKYLHENVKNPEFLKETITDYIKLLAPFAPHFAEEQWNQLGNTSSVFNE 741

Query: 468 KLANKIFD-ILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           +L    FD    + DE      ++ ++K   M+  + D
Sbjct: 742 RLPE--FDPSALIKDEVEIAIQVNGKIKAKIMVSSSLD 777



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 23/184 (12%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ AQ H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYTLEMFSYPSGAQLHAGHWFNYGPTDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGV----TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             G+    +T   ++   +  + M  + +  +++ + T    ++   + L+ ++  KG  
Sbjct: 91  KTGIHPHDSTLKNIETMEKQLKSMGAMFN--WENEVVTCLPDYYKWTQWLFLQLYKKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAYQ 173
           Y K     W    +    N+  V    DG+         + +  QW      FF+++ Y 
Sbjct: 149 YRKNAPVNWCPSCNTVLANEQVV----DGECERCGSLVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202


>gi|148878499|sp|Q4A8Y0|SYI_MYCH7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144575246|gb|AAZ53409.2| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 886

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 35/269 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       + P        P D++  G D  R  F++    + +     
Sbjct: 518 ILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSVIYFGFS 569

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KK+ SHGF++  KG K+SKS GN +DP+ ++ + G D  R ++        D  Y +
Sbjct: 570 PY-KKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANS-EYYNDIVYSE 627

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++ V       I   +  +V  ++ +     P     TE D  I +   ++  EI +
Sbjct: 628 AIFEQNVE------IYRKIRNTVRFLITNLADFKPKKYELTEVDLYIFNKIQKLKNEIIQ 681

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF--------DAQKPWELKKTNPDRASTVLYVTVEVI 455
           N       R +  + + + E   ++         A K   LK+        V Y   E++
Sbjct: 682 NYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKR------RQVQYNLYELL 735

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           + L I +   +P  A +I+   F+   N+
Sbjct: 736 QVLNIAIAPIMPTTAEEIYS--FIQKNNK 762



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I  K     G  + + +
Sbjct: 61  YANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEI 120

Query: 74  DQNSRNFRD------MADVLDIS----YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + S +F +      MA    ++    +    +T    +      L+KK+  +G +Y+  
Sbjct: 121 RRKSNDFANSQILAQMAQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRAL 180

Query: 124 YSGWYSLRDEAYYNDDEV 141
              ++S   ++   + E+
Sbjct: 181 KPVYWSPSSQSALAEAEI 198


>gi|116492940|ref|YP_804675.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265596|sp|Q03EY9|SYI_PEDPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116103090|gb|ABJ68233.1| Isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 933

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L    YL+         +PADL + G D  R  F++    +  +S
Sbjct: 526 IMDVWFDSGSSHQGVLAQRDYLE---------YPADLVLEGSDQYRGWFNSSLITSVAVS 576

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
              P  KKV S GF L  KG K+SKSLGN I P E+ +++G + +R +
Sbjct: 577 GKAPY-KKVISQGFTLDGKGHKMSKSLGNTIVPDEINKKMGAEIIRLW 623



 Score = 40.0 bits (92), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R+  + G    F  G D HG  I +     G   K    
Sbjct: 58  YANGNIHMGHAMNKISKDIIVRYKSMSGFRSPFVPGWDTHGLPIEQQLTKEGYDRK---K 114

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKR 101
            ++ +FR +     +   D  RT  KR
Sbjct: 115 MSTADFRKLCHEYALKQVDKQRTDFKR 141


>gi|326799867|ref|YP_004317686.1| valyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326550631|gb|ADZ79016.1| Valyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 881

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 30/244 (12%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-G 300
           P+G+   ++ P +  V   +IL F    W A ++ A          K V+  G +  K G
Sbjct: 481 PNGADINYYYPTNDLVTAPEILFF----WVARMMIAGHEFRGKAPFKNVYLTGIVRDKLG 536

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN  DPIE++++ G D +R  ++     G D  +D    ++  N   AN I N
Sbjct: 537 RKMSKSLGNSPDPIELMDQYGTDGVRVGMLLSSPAGNDLMFDVAYCEQGRN--FANKIWN 594

Query: 361 LVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
                   ++K ++ +  P   A  ++ E   S  S  + E+ E+     +  AL  +  
Sbjct: 595 AFR-----LVKGWETVNKPATKAELKTVEWFESRFSEAVIEVEEHFAAYRLSDALMTIYK 649

Query: 420 LVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIF- 474
           L+      +D    W L+   P      A  +L  T++   Q+  L   F+P +  +++ 
Sbjct: 650 LI------WDDFCSWYLELVKPAYQQPIAKDLLTFTIDFFEQVLALAHPFMPFITEELWH 703

Query: 475 DILF 478
           D LF
Sbjct: 704 DELF 707


>gi|239916022|gb|ACS34699.1| MIP10137p [Drosophila melanogaster]
          Length = 946

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+ + +    G        K K   ADL++ G D  +F   +  + L+S  A  
Sbjct: 567 ILDIWFDSGSTWSAVLG--------KDKI--ADLYLEGYD--QFTGWFQSSLLMSIAARE 614

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P K +F HGF +  KG K+SKSLGNVI P ++ ++ G DALR+++ 
Sbjct: 615 CAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQITKKYGTDALRWWVA 662


>gi|170750501|ref|YP_001756761.1| leucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170657023|gb|ACB26078.1| leucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 861

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 40  RPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGLPAENAAM 99

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N  + RD    + +S D
Sbjct: 100 ERKVNPRDWTYANIASMRDQLKAMGLSLD 128



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/177 (19%), Positives = 78/177 (44%), Gaps = 28/177 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 630 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAAR 680

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V +   ++  +  G     GA   +D ++     R L  ++++++    +R +A + +L
Sbjct: 681 FVQKVWRLV--NAAGQAKGDGA---ADLALRKAAHRALASVQDDIERLRFNRCVAHIYTL 735

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + ++              +P  A     + V++I  +       +P LA + + +L
Sbjct: 736 ANALEDGLRG-------PVSPAAAKEAAGILVQLIAPM-------MPHLAEECWSVL 778


>gi|167763023|ref|ZP_02435150.1| hypothetical protein BACSTE_01388 [Bacteroides stercoris ATCC
           43183]
 gi|167699363|gb|EDS15942.1| hypothetical protein BACSTE_01388 [Bacteroides stercoris ATCC
           43183]
          Length = 1162

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|157964837|ref|YP_001499661.1| valyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844613|gb|ABV85114.1| Valyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 841

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 38/282 (13%)

Query: 223 DPQY-IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--W 275
           +P Y +M  W   +++  L+T G  D+   +K    K +P  L     +I+R  A Y   
Sbjct: 479 EPDYEVMDTWATSSVSPQLSTHGISDDFAINKDRHDKLFPMHLRPQAHEIIRTWAFYTIL 538

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       
Sbjct: 539 KAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KL 597

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  Y +D +K      L N + N  ++ VS+      G         +   S+L +  
Sbjct: 598 GADTAYSEDIMKN--GKRLVNKLWN-AAKFVSIHFDKLKG--------EDKKASLLDIKE 646

Query: 396 RVLQEIRENMQNQLIHRA-----------------LAQVISLVSEVDRYFDAQK--PWEL 436
           ++  E  + M N+L+                    L +    V   D Y +  K   ++ 
Sbjct: 647 KITNEFDKWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVFCDNYLEISKTRSYDE 706

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 707 ENKNPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 748



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 64  KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNG 116


>gi|72080374|ref|YP_287432.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 887

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 35/269 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       + P        P D++  G D  R  F++    + +     
Sbjct: 519 ILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSVIYFGFS 570

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  KK+ SHGF++  KG K+SKS GN +DP+ ++ + G D  R ++        D  Y +
Sbjct: 571 PY-KKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANS-EYYNDIVYSE 628

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++ V       I   +  +V  ++ +     P     TE D  I +   ++  EI +
Sbjct: 629 AIFEQNVE------IYRKIRNTVRFLITNLADFKPKKYELTEVDLYIFNKIQKLKNEIIQ 682

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF--------DAQKPWELKKTNPDRASTVLYVTVEVI 455
           N       R +  + + + E   ++         A K   LK+        V Y   E++
Sbjct: 683 NYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKR------RQVQYNLYELL 736

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
           + L I +   +P  A +I+   F+   N+
Sbjct: 737 QVLNIAIAPIMPTTAEEIYS--FIQKNNK 763



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 11/138 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I  K     G  + + +
Sbjct: 62  YANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEI 121

Query: 74  DQNSRNFRD------MADV----LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + S +F +      MA      L   +    +T    +      L+KK+  +G +Y+  
Sbjct: 122 RRKSNDFANSQILAQMAQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRAL 181

Query: 124 YSGWYSLRDEAYYNDDEV 141
              ++S   ++   + E+
Sbjct: 182 KPVYWSPSSQSALAEAEI 199


>gi|237709197|ref|ZP_04539678.1| leucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229456893|gb|EEO62614.1| leucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 944

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +    N   +R+  D +  S+  D  +RT E  ++
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWDREVRTCEPGYY 132



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDTEAFKAWRPEYNNAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  ++     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYSRTDEFL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P     T+ +   L    ++++++  +++    + +++  +  V+E+           LK
Sbjct: 785 PVESEPTKEE---LKAIHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLK 832

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             N            EV+  L ILL  F P  A ++++ L
Sbjct: 833 CRNK-----------EVLSNLIILLAPFAPHYAEELWEAL 861


>gi|119953516|ref|YP_945725.1| valyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119862287|gb|AAX18055.1| valyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 874

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 10/90 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P +  V   DI+ F    W A ++ A L    +V F   +I       KG K+SKSLG
Sbjct: 475 YYPTNTLVTAYDIIFF----WVARMVMAGLEFTGQVPFKDIYITPLLRDKKGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           N IDP+E+I++ G DALR+ L      G+D
Sbjct: 531 NGIDPLEIIDQYGSDALRFTLAFLSVQGQD 560



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA    + D+L R+ R+ G + L+  GTD  G
Sbjct: 52 HMGHALNFTLQDILVRYKRMQGANTLWLFGTDHAG 86


>gi|153215118|ref|ZP_01949825.1| isoleucyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114909|gb|EAY33729.1| isoleucyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 949

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|120602286|ref|YP_966686.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166980054|sp|A1VCU3|SYI_DESVV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120562515|gb|ABM28259.1| Isoleucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 938

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +  +   +PADL++ G D  R  FH+    A + +  +
Sbjct: 536 ILDVWFDSGTSFAAVV------EQREECGFPADLYLEGSDQHRGWFHSSLL-ASIGTRGV 588

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HG+++   G K+SKS+GNV+ P E+I++ G + LR ++ 
Sbjct: 589 PPYRSVLTHGYVVDGDGRKMSKSVGNVVAPQEIIDKHGAEVLRLWVA 635


>gi|92115730|ref|YP_575459.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|122990360|sp|Q1QRZ8|SYL_NITHX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91798624|gb|ABE60999.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 878

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYMRAKGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N +  +     + +S D
Sbjct: 93  ERKVAPKAWTYDNIKAMKKQLRSIGLSLD 121



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 29/47 (61%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G++
Sbjct: 629 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQ 675


>gi|45644670|gb|AAS73058.1| predicted leucyl-tRNA synthetase [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 735

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
            K+W P DL++ G +    H +Y   F        LL  + P  K++ + G +L  G K+
Sbjct: 438 TKYWLPVDLYIGGIEHAILHLLYSRFFHKALRDIGLLEGDEPF-KRLLTQGMVLKDGAKM 496

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLV 330
           SKS GN +DP   IE+ G D +R +++
Sbjct: 497 SKSKGNTVDPQSYIEKYGADTVRLYMM 523



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRT 97
           +   +V    G D  G     AA    V+ K + DQN  N +D    L  SYD    +RT
Sbjct: 1   MKNFNVFQPMGWDAFGLPAENAAIANKVSPKEWTDQNIDNMKDQLKSLGFSYDWSKELRT 60

Query: 98  TEKRHHDTCRILWKKISDKGDIY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            + +++   ++++KK  D G +Y K  +  W  + DE    +++V  G  G    AQ   
Sbjct: 61  CDSKYYKWEQLIFKKFYDAGLVYRKKSFVNWDPV-DETVLANEQVIDGK-GWRSGAQ--- 115

Query: 157 VQWMEEEGYFFRLSAYQDKLLS 178
           ++  E + +F +++ Y D+LL+
Sbjct: 116 IEIKEIDQWFIKITKYADELLN 137


>gi|57866707|ref|YP_188341.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|81819412|sp|Q5HPZ9|SYI_STAEQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57637365|gb|AAW54153.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 916

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|157826106|ref|YP_001493826.1| valyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225528|sp|A8GPJ3|SYV_RICAH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157800064|gb|ABV75318.1| valyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 812

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 15/237 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P DL     +I+R  A Y    A L    LP    + S   +     K+SKS GNV+
Sbjct: 486 KLFPMDLRPQAHEIIRTWAFYTILKAHLHQNTLPWGNIMVSGWCLAEDRSKMSKSKGNVL 545

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMI 369
            P +++E+ G D +RY+       G D  Y +D +K  KR+   L N    +        
Sbjct: 546 VPEKLLEQYGSDVIRYWSANS-KLGADTAYSEDVMKNGKRLVNKLWNACKFIFIHCNK-- 602

Query: 370 LKDYD---GMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSE 423
           LKD D    +       T E D+ +++    ++      +QN     A  L +    V  
Sbjct: 603 LKDVDKKASLFDIKEQITNEFDQWMINKLVELVNAATNELQNYEYANAMHLTEKFFWVIF 662

Query: 424 VDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            D Y +  K   ++ +  NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 663 CDNYLEISKTRSYDEENKNPQGQYSSILTLYHVMQILLKLFAPFIPHITEELYQILY 719



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + + E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 33 ISKEETYVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMIGKNIFYPMGFDDNG 87


>gi|327184092|gb|AEA32539.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 804

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 12/208 (5%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D++AR  R  G +VL   G D  G    + A   G   +V    N  NF
Sbjct: 47  HVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEVVTKNNIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++   G  Y+      +S        +
Sbjct: 107 KRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKNGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEFILPIERRN 194
           +EV  G    G Y   + N  QWM       +++AY D+LL   +    PE +  ++R  
Sbjct: 167 EEVIDGKTERGGYPVYRKNMRQWM------LKMTAYADRLLEDLDGLDWPEPVKEMQRNW 220

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              S        +  S KTFD     PD
Sbjct: 221 IGRSVGAQVTFKIKGSDKTFDIFTTRPD 248



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +VI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQK 689


>gi|319401513|gb|EFV89723.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 916

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|303233314|ref|ZP_07319985.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480614|gb|EFL43703.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 877

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GHA    I DV+AR   + G DVL   G D  G     AA 
Sbjct: 44  KPKQYVLEMFPYPSGDLHMGHARNYTIGDVMARQLHMRGYDVLHPMGFDAFGLPAENAAI 103

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                  V+   N +        +  SYD      T +  ++   + ++ K+ +KG  Y+
Sbjct: 104 KHHTEPSVWTYGNIKQATATMKRMGFSYDYSRTFNTCDPEYYRWGQWMFIKMWEKGLAYR 163

Query: 122 GCYS--GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             YS   W    +    N+  +    +G  +   H+  Q  +   ++ +++AY D+LLS
Sbjct: 164 A-YSDVNWCDTCNTVLANEQVI----NGCCWRC-HSVAQKKKLSQWYLKITAYADELLS 216



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 27/47 (57%)

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           H GE +SKS GNV+ P  VIE  G D LR  ++      KD  +D+D
Sbjct: 613 HNGETMSKSKGNVVPPASVIEPYGADTLRLAILFIAPAEKDFDWDED 659


>gi|295425358|ref|ZP_06818061.1| leucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065134|gb|EFG56039.1| leucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 804

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +VI+E G D+LR + +          +D +G                + R   ++
Sbjct: 581 VVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLM 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      E+D  +  V +  ++++ E+      + A++Q++   +   +
Sbjct: 632 VNDLDLKAIPQEKIVDENDGELDKVYNETVKKVTEDFDALHFNTAISQMMVFANAAQK 689



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D++AR  R  G +VL   G D  G    + A   G    +   +N   F
Sbjct: 47  HVGHPEGYTATDIIARMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPALVTKENIATF 106

Query: 81  RDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           ++  + L  SYD    I T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KEQLNKLGFSYDWGREITTSDPNYYKWTQWVFEQMYKKGLAYEADVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +EV  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEVIDGKTERGGYPVYRRNMKQWM------LKMTAY 196


>gi|237724325|ref|ZP_04554806.1| leucyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229437194|gb|EEO47271.1| leucyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 944

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +    N   +R+  D +  S+  D  +RT E  ++
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWDREVRTCEPGYY 132



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 95/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDTEAFKAWRPEYNNAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  ++     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYSRTDEFL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P     T+ +   L    ++++++  +++    + +++  +  V+E+           LK
Sbjct: 785 PVESEPTKEE---LKAIHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLK 832

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             N            EV+  L ILL  F P  A ++++ L
Sbjct: 833 CRNK-----------EVLSNLIILLAPFAPHYAEELWEAL 861


>gi|218131721|ref|ZP_03460525.1| hypothetical protein BACEGG_03342 [Bacteroides eggerthii DSM 20697]
 gi|217986024|gb|EEC52363.1| hypothetical protein BACEGG_03342 [Bacteroides eggerthii DSM 20697]
          Length = 955

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142


>gi|254168356|ref|ZP_04875201.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622637|gb|EDY35207.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1037

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)

Query: 226 YIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Y++ VW D+ +       Y  +N D  +  F P D      D  R  F+ +   + ++  
Sbjct: 522 YLIDVWFDSGSAPFAQFHYPYENKDEFERSF-PVDFITEALDQTRGWFYTLMAISTVVFN 580

Query: 283 NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K V + G IL + GEK+SKS GN +DP+E++  VG DA+R +           FY
Sbjct: 581 RAPY-KNVLTLGLILDEDGEKMSKSKGNAVDPMEIMNNVGADAVRLY-----------FY 628

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDY---------DGMIPTP-GAF-TESDESI 390
                K R  ++  N +     +++  +   Y         D   P   G    E D  +
Sbjct: 629 STPVWKSRRFSE--NLVREYAQKTLMTLWNVYVFFKNNASLDNFTPDKIGEIKNELDSWL 686

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           LS  +  + E+R+N+ +  IH+A   +   + E+  ++
Sbjct: 687 LSRLNTTIVEVRKNLDSLDIHKATKAIEVFIDELSNWY 724



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIA-KAAQNAGVTTKVFVD 74
           N  PHIGHA    + D++ R+  +DG D+  +  G D HG  +  +  +  G+ +K  ++
Sbjct: 62  NGMPHIGHALTRSVKDIILRYKAMDGYDIQPWIGGWDCHGLPVEIEVEKKLGINSKREIE 121

Query: 75  Q-NSRNFRDMADVLDISY-DDFIRTTEK 100
           +   R F  +       Y D++I+ T++
Sbjct: 122 KFGIREFNKLCRESVFKYRDEWIKMTKR 149


>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554705|sp|Q31CU4|SYI_PROM9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 968

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 39/283 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++            S+ K+ PADL++ G D    H  ++ + LL++    N
Sbjct: 553 MDVWFDSGSSWAAVC-----EQRSELKY-PADLYLEGSDQ---HRGWFQSSLLTSVAVNN 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
            P  KKV +HGF L   G K+SKSLGNV+DP  +I            G D LR + V  +
Sbjct: 604 KPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKIEPAYGADVLRLW-VSSV 662

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DE 388
               D     + LK+   +D+   + N  +R +   + DYD   P   +F        D+
Sbjct: 663 DYSVDVPIGSNILKQL--SDVYRKVRN-TARYLLGNIHDYD---PNIDSFEIDQLPLLDQ 716

Query: 389 SILSVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRAS 445
            +L     V  +I    +N    +   + Q   +V   + Y D A+    +   +  R  
Sbjct: 717 WMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSSKSQFRRR 776

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQ 487
           +  +V  +V+  LA+L+   +  +A  I+ ++ +   E   FQ
Sbjct: 777 SCQFVMSKVVENLAVLISPVLCHMAEDIWQNVPYSTKEKSVFQ 819


>gi|46580336|ref|YP_011144.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|81566588|sp|Q72AR5|SYI_DESVH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46449753|gb|AAS96403.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233685|gb|ADP86539.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 938

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +  +   +PADL++ G D  R  FH+    A + +  +
Sbjct: 536 ILDVWFDSGTSFAAVV------EQREECGFPADLYLEGSDQHRGWFHSSLL-ASIGTRGV 588

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HG+++   G K+SKS+GNV+ P E+I++ G + LR ++ 
Sbjct: 589 PPYRSVLTHGYVVDGDGRKMSKSVGNVVAPQEIIDKHGAEVLRLWVA 635


>gi|326519638|dbj|BAK00192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1046

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 10/158 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWP 276
           ++  DP  ++  W  A    LT  G+ DN     + F+P  +   G DIL F    +   
Sbjct: 557 QLDQDPD-VLDTWFSAGLFPLTILGWPDN-TTDLSTFYPTSVLETGLDILFFWVARMVMM 614

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             LL  ++P  +K++ H  I    G K+SKSLGNVIDPI+VI  + ++ L+  L +    
Sbjct: 615 GMLLHGDVPF-QKIYLHPIIRDAHGRKMSKSLGNVIDPIDVINGITLEGLQKKLEQGNLD 673

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +    K+G KK    D  +GI    + ++   L  Y
Sbjct: 674 QGELEKAKEGQKK----DFPDGIPECGTDALRFALISY 707


>gi|227329317|ref|ZP_03833341.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 921

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 25/213 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K+PD     + VW D+ + + +         G +A     D+++ G D  R  F +   
Sbjct: 509 VKVPD----TLDVWFDSGSTHSSVVDVRPEFSGHEA-----DMYLEGSDQHRGWFMSSLM 559

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +  +    P  ++V +HGF +  +G K+SKS+GN + P +V+ ++G D LR ++     
Sbjct: 560 ISTAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWIGSTDY 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-- 392
            G+    D+  + KR +AD    I N    +   +L + +G  P   +    D  +L   
Sbjct: 619 SGEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPQKDSVKPEDMVVLDRW 671

Query: 393 --VCSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C++  Q EI E  ++   HR + +++   S
Sbjct: 672 AVSCAKAAQEEILEAYESYDFHRVVQRLMQFCS 704


>gi|226362855|ref|YP_002780635.1| leucyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226241342|dbj|BAH51690.1| leucyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 945

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV AR+HR+ G +VL T G D  G    + A 
Sbjct: 57  DKLFVQDMFPYPSGTGLHVGHPLGYIATDVFARYHRMQGHNVLHTLGYDAFGLPAEQYAV 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N  N +     L + +D+
Sbjct: 117 QTGTHPRTTTEANIGNMKRQLRRLGLGHDE 146


>gi|153807681|ref|ZP_01960349.1| hypothetical protein BACCAC_01963 [Bacteroides caccae ATCC 43185]
 gi|149130043|gb|EDM21255.1| hypothetical protein BACCAC_01963 [Bacteroides caccae ATCC 43185]
          Length = 878

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 23/147 (15%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   + K++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEIKYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFCN 586

Query: 357 GIGNLVSRSVSMILKDY---DGMIPTP 380
            I N        ++K +   +G IP P
Sbjct: 587 KIWNAFR-----LIKGWTNAEGSIPVP 608


>gi|83950451|ref|ZP_00959184.1| isoleucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83838350|gb|EAP77646.1| isoleucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 969

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 39/212 (18%)

Query: 210 SRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           +++ F  GI  P+D      I+ VW D+ + +       D  DG++     AD+++ G D
Sbjct: 556 AKERFLGGIVNPEDYDQVFDILDVWFDSGSTHAFV--LRDREDGTEDGI--ADVYMEGTD 611

Query: 267 ILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
             R  FH+    +   +   P  + V +HGF L  KG K+SKS+GN I P +V+++ G D
Sbjct: 612 QHRGWFHSSLLQSVGTTGRAPY-RNVVTHGFTLDEKGLKMSKSIGNTIVPQQVVDQYGAD 670

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIPTP 380
            LR ++ +         Y  D   +R+  ++  G  +   R   +V  +L          
Sbjct: 671 ILRLWVAQTD-------YTAD---QRIGPEILKGTADSYRRLRNTVRFML---------- 710

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           GA    DES      RV  E    ++  ++HR
Sbjct: 711 GALAHFDES-----DRVEAEAMPELEQWVLHR 737



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 54  RKPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYIPGWDCHGLPI 108


>gi|290769947|gb|ADD61716.1| putative protein [uncultured organism]
          Length = 1162

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|293369279|ref|ZP_06615866.1| leucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292635609|gb|EFF54114.1| leucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 944

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142



 Score = 43.5 bits (101), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|212709904|ref|ZP_03318032.1| hypothetical protein PROVALCAL_00954 [Providencia alcalifaciens DSM
           30120]
 gi|212687416|gb|EEB46944.1| hypothetical protein PROVALCAL_00954 [Providencia alcalifaciens DSM
           30120]
          Length = 964

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N D  K  F P D+ V G DI+ F    W A ++   +  
Sbjct: 485 VLDTWFSSGLWTFSTLGWPENTDALKT-FHPTDVLVSGFDIIFF----WIARMIMMTMHF 539

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I   +G+K+SKS GNVIDP+++I+ +              
Sbjct: 540 IKDENGEPQVPFKTVYMTGLIRDEEGQKMSKSKGNVIDPLDMIDGISLEALLEKRTGNMM 599

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 600 QPQLAEKIAKRTRKEYPDGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 657

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +  D G      +F+ +D  I++  ++ ++  RE +       A   
Sbjct: 658 LWN-ASRFVLMNTEGQDCGQNGGEMSFSLADRWIMAQFNQTVKAYREALDTHRYDIAAGI 716

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 717 LYDFTWNEFCDWYLELSKP-AVHKGNEAQVRAARFTLIEVLEGLLRLAHPIIPFITETIW 775



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+ TGTD           +AG+ T++ V++
Sbjct: 62  HMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTD-----------HAGIATQMVVER 105


>gi|331268720|ref|YP_004395212.1| leucyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125270|gb|AEB75215.1| leucyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 812

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKK 289
           Y+DN +  KA       K  P D +V G +    H +Y   F+  A       N   P K
Sbjct: 499 YVDNNNSEKAFDIDKVNKMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFK 557

Query: 290 VFSH-GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +H G IL   G K+SKS GN I P + I+E G D  R +L+   A  + G +  D +K
Sbjct: 558 SLTHQGLILGPDGLKMSKSKGNTIAPDDYIKEFGADVFRMYLMFGFAYSEGGAWSDDAIK 617

Query: 348 KRVNADLANGIGNLVSRSVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
                     +G  + + V  +L D     +    T     +S++ +       +Q + E
Sbjct: 618 ---------SMGRFIDK-VERLLDDARTELNNSKNTKTTMEKSEKELNYARHYAIQHVTE 667

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI--- 460
           +      + A+A+++   + + +Y + +                  V +E +++      
Sbjct: 668 DTDKFQFNTAIARIMEYTNSLSKYLNEEN-----------------VNIEFLKEALCDYV 710

Query: 461 -LLQAFVPKLANKIFDIL 477
            LL  F P  + + +++L
Sbjct: 711 KLLAPFTPHFSEEQWELL 728



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+A + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSAAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             GV  +   D   +N  +M + L       ++D  I T    ++   + ++ K+ +KG 
Sbjct: 91  KTGVHPQ---DSTMKNIENMEEQLKSMGAMFNWDHEIVTCLPDYYKWTQWVFLKLYEKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYR 150


>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 922

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PADL++ G D  R  F++    +  ++   
Sbjct: 523 IMDVWFDSGSSH---QGVL----VERGMKYPADLYLEGSDQHRGWFNSSLITSVAINGYA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF+L  +G K+SKSLGNVI P +V+++ G D LR ++
Sbjct: 576 PY-KGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMDQYGADILRLWV 620



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 20/155 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R +  +     Y N   HIGHA   ++ D++ R   + G  V +  G D HG  I +A  
Sbjct: 48  RPEFVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIEQALT 107

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT----------------TEKRHHDTCR 107
           N GV  K   + +   FR + +       D  RT                T K   +  +
Sbjct: 108 NKGVKRK---EMSVAAFRQLCEEYAYEQIDNQRTQFRRLGIRGDWENPYITLKPEFEARQ 164

Query: 108 I-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           I ++ K+++KG IYKG    ++S   E+   + E+
Sbjct: 165 IEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEI 199


>gi|116873095|ref|YP_849876.1| leucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461123|sp|A0AJB5|SYL_LISW6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116741973|emb|CAK21097.1| leucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 803

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKG 122
            Y+ 
Sbjct: 148 AYEA 151



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISKSLG 308
           P D+++ G +    H +Y   W  FL    +   K    K+F+ G IL    EK+SKS G
Sbjct: 522 PVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSRG 581

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NV++P EV+E+ G D LR +
Sbjct: 582 NVVNPDEVVEKYGADTLRMY 601


>gi|329729986|gb|EGG66377.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 916

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|328871005|gb|EGG19377.1| valyl tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1070

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 118/315 (37%), Gaps = 74/315 (23%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I +  DP  ++  W  +     +T G+ +        F+P  L   G DIL F    W A
Sbjct: 582 ISLEQDPD-VLDTWFSSGLFPFSTMGWPEKT-ADMENFYPTSLLETGSDILFF----WVA 635

Query: 278 FL------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE------------ 318
            +      L+  LP  K+VF H  +    G K+SKSLGNVIDP +VI             
Sbjct: 636 RMVMMGQQLTGQLPF-KQVFLHAMVRDSHGHKMSKSLGNVIDPTDVINGISLNQLQENLK 694

Query: 319 -------------------------EVGVDALRYFLVREIACGKDGFYD---KDGLKKRV 350
                                    E G DALR+ L    + G+D   D    DG ++  
Sbjct: 695 TGNLEQKEFTRASAALKLDYPNGIPECGTDALRFALCAYTSQGRDINLDILRVDGYRR-- 752

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES----ILSVCSRVLQEIRENMQ 406
                N I N    ++  +  DY  +     A   +  S    IL+  +R ++ + +  +
Sbjct: 753 ---FCNKIWNATRFALMKLGTDYKPIDFDAEALINNSSSVNRWILNAAARAIRLVDQGFK 809

Query: 407 NQLIHRALAQVIS--LVSEVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLA 459
           +     A   + +  L    D Y +  KP      N D     R    LY  +E+  +  
Sbjct: 810 DYDFAAATTAIYNFWLHELCDFYLETTKPI-FSDDNNDAEDKLRTKHTLYTCIEIGLK-- 866

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P L  +++
Sbjct: 867 -LLHPFMPYLTEELY 880


>gi|329954923|ref|ZP_08295940.1| isoleucine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328527027|gb|EGF54038.1| isoleucine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 1162

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|281422107|ref|ZP_06253106.1| valine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403896|gb|EFB34576.1| valine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 893

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 106/246 (43%), Gaps = 29/246 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           +++PD  +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 489 IEHPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKMPF-KHVYFTGIVR 543

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+   ++  N     
Sbjct: 544 DKLGRKMSKSLGNSPDPLVLIDKFGADGVRMGMMLSAPAGNDILFDESLCEQGRN----- 598

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              N +  +  ++       I  P    +S E  +      L+E+ E MQ Q     +++
Sbjct: 599 -FNNKIWNAFRLVKGWETADIEQP----KSAEIAVKWFDAKLKEVNEEMQKQFKDYRISE 653

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANK 472
            +  V ++  ++D    W L+   P     +       T+     L  +L  F+P +  +
Sbjct: 654 ALMTVYKL--FWDEFSSWYLEMVKPAYGQPIDQKSYDATLRFFDVLLKMLHPFMPFITEE 711

Query: 473 IFDILF 478
           ++  ++
Sbjct: 712 LWQHIY 717


>gi|219111249|ref|XP_002177376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411911|gb|EEC51839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1066

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +  G+ D+    KA F+P  L   G DIL F    W A ++   L L
Sbjct: 575 VLDTWFSSGLFPFSVMGWPDDTSDLKA-FYPTSLLETGLDILFF----WVARMVMMGLEL 629

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              +  H   LH      +G+K+SKSLGNVIDP+EVI    + +L+  L
Sbjct: 630 TDTLPFHTVFLHAMVRDKEGKKMSKSLGNVIDPLEVINGCSLASLQERL 678



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           H+GHA    + D L R+HR+ G   L+  GTD  G
Sbjct: 134 HLGHALTAAVEDTLTRWHRMKGHATLYVPGTDHAG 168


>gi|145343633|ref|XP_001416420.1| Isoleucine-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
 gi|144576645|gb|ABO94713.1| Isoleucine-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
          Length = 1136

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 22/261 (8%)

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
           P  +K +F   +PAD    G D  R    ++   +LS  L   P  K +  +G +L   G
Sbjct: 554 PFENKERFESAFPADFVAEGLDQTR--GWFYTLMVLSTALFDKPAFKNLICNGLVLASDG 611

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLAN 356
           +K+SKSL N  DP  ++++ G DALR +L+       +    K+    G+ K V     N
Sbjct: 612 KKMSKSLKNYPDPNTILDKYGADALRLYLIDSPVVRAEPLRFKEEGVFGVLKDVFLPWYN 671

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRA 413
               LV     +         P+ G  T     D  ILS  + ++Q + E M +  ++  
Sbjct: 672 AYRFLVQNVRLLEETASIPFTPSEGEPTSKNVLDIWILSSTNSLVQFVTEEMHSYRLYTV 731

Query: 414 LAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + ++IS +S++   +       LK K   D +   L V   V+  +   +  F P     
Sbjct: 732 VPRLISFISQLTNVYVRYNRGRLKGKDGGDESRCALDVLFNVLLTICKTMAPFTPFFVEN 791

Query: 473 IFDILFVADENRCFQSLDQRL 493
           ++  L      RC    ++ +
Sbjct: 792 MYQNL-----RRCLPESEESI 807


>gi|148266323|ref|YP_001233029.1| isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146399823|gb|ABQ28456.1| Isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 924

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 17/141 (12%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E    +  G K  S  ++ FD  + I D       VW D+  ++     +  N       
Sbjct: 505 EAGELLPPGTKCPSCGKEEFDKEMDILD-------VWFDSGVSHAAVLEHRPNLSS---- 553

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
             PAD+++ G D  R  FH+    +       P  K V +HGF++   G K+SKS+GNV+
Sbjct: 554 --PADMYLEGSDQHRGWFHSSLLASVGTRGVAPY-KSVLTHGFVVDGSGRKMSKSVGNVV 610

Query: 312 DPIEVIEEVGVDALRYFLVRE 332
            P +VI++ G + LR ++  +
Sbjct: 611 APEDVIKKYGAEVLRLWVAAQ 631



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVT----T 69
           Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I  +  +N G      +
Sbjct: 58  YANGHIHIGHALNKILKDIVLKSKRMSGFDAPYIPGWDCHGLPIELQVEKNLGSKKHEIS 117

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIR 96
           K+ + +  R +   A  +DI   +F R
Sbjct: 118 KLEMRKLCREY--AAKFVDIQKKEFER 142


>gi|329734417|gb|EGG70730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 916

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|227517927|ref|ZP_03947976.1| possible isoleucyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074615|gb|EEI12578.1| possible isoleucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 404

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 22/160 (13%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PAD+++ G D  R  F++    +  ++   P  K + S G +L  +G K+SKSLGN I 
Sbjct: 23  FPADMYLEGSDQYRGWFNSSITTSVAINGVAPY-KSIISQGMVLDGEGRKMSKSLGNTIL 81

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL---VSRSVSMI 369
           P +VI ++G D LR + V  +    D          RV+ D+ N +  +   +  ++  +
Sbjct: 82  PEKVINQMGADILRLW-VSSVDAEAD---------VRVSMDILNQVSEVYRKIRNTMRFL 131

Query: 370 LKDYDGMIPTPGAFTESD----ESILSV-CSRVLQEIREN 404
           L +     P       +D    +  ++V  ++V+QEIREN
Sbjct: 132 LANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIREN 171


>gi|325957385|ref|YP_004292797.1| leucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333950|gb|ADZ07858.1| leucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 804

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 12/208 (5%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D++AR  R  G +VL   G D  G    + A   G   +V    N  NF
Sbjct: 47  HVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEVVTKNNIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++   G  Y+      +S        +
Sbjct: 107 KRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKNGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEFILPIERRN 194
           +EV  G    G Y   + N  QWM       +++AY D+LL   +    PE +  ++R  
Sbjct: 167 EEVIDGKTERGGYPVYRKNMRQWM------LKMTAYADRLLEDLDGLDWPEPVKEMQRNW 220

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              S        +  S KTFD     PD
Sbjct: 221 IGRSVGAQVTFKIKGSDKTFDIFTTRPD 248



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +VI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQK 689


>gi|325969890|ref|YP_004246081.1| leucyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324025128|gb|ADY11887.1| leucyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 842

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 13/195 (6%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+ A  H+GH       D+  RF R+ G +VL   G D  G      A 
Sbjct: 39  KRAYVLDMFPYPSGAGLHVGHPEGYTATDIYCRFLRMRGYNVLHPMGFDSFGLPAENYAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K   ++N  NFR     L  SYD    I T    ++   + ++ ++ +KG  Y+
Sbjct: 99  KTGTHPKATTEKNIENFRKQIKSLGFSYDWNREISTHSSDYYRWTQWIFIQLFNKGLAYE 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                 +  + +    ++EV  G   +      + N  QW+       +++ Y DKLLS 
Sbjct: 159 SHTPINWCGQCKTGLANEEVKDGKCERCGTTVVRKNIRQWV------LKITEYADKLLSD 212

Query: 180 YES--HPEFILPIER 192
            +S   PE +  ++R
Sbjct: 213 LDSVDWPESVKLMQR 227


>gi|319639594|ref|ZP_07994341.1| valyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399165|gb|EFV79839.1| valyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 943

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|254671995|emb|CBA04475.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 837

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 15/186 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA    V    +  
Sbjct: 4   YPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY 63

Query: 75  QNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
            N    +     L  + D      T +  ++   + L+ K+ +KG +Y+   +  +   D
Sbjct: 64  DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDPVD 123

Query: 133 EAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS---YYESHPEF 186
           +    +++V  G     G     +  P+       Y+F+++ Y ++LL+     E  PE 
Sbjct: 124 QTVLANEQVIDGRGWRSGALIEKREIPM-------YYFKITDYAEELLNDLDKLEHWPEQ 176

Query: 187 ILPIER 192
           +  ++R
Sbjct: 177 VKTMQR 182


>gi|50365207|ref|YP_053632.1| isoleucyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827300|sp|Q6F175|SYI_MESFL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50363763|gb|AAT75748.1| isoleucyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 908

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P DL++ G D  R  F+A    + + S   P  KK+ SHG  +  KG K+SKSLGN IDP
Sbjct: 548 PYDLYLEGNDQYRGWFNASMINSTIYSGKSPY-KKLISHGMTVDEKGNKMSKSLGNGIDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           IE     G D LR ++
Sbjct: 607 IEFANTQGADILRLWV 622



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA    + D++ R+   +G    F  G D HG  I  A    G+  K    
Sbjct: 60  YANGDLHIGHALNKTLKDMIIRWKNANGYLAPFIMGWDTHGLPIETAVTKMGIDRK---Q 116

Query: 75  QNSRNFRDMA 84
             +  FRDM 
Sbjct: 117 TPAVEFRDMC 126


>gi|317477070|ref|ZP_07936312.1| isoleucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906863|gb|EFV28575.1| isoleucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 1162

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|308276957|gb|ADO26856.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 837

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 18/132 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ +       KF+P  + V   DIL F       F   A
Sbjct: 387 DPD-VLDTWFSSALWPFSTMGWPEKTP-ELEKFYPTSVLVTAYDILFFWVARMMMFGTLA 444

Query: 283 NLPLPK---------------KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
           +   P+                +F HG +  + G K+SKSLGN IDP++ +E  G DALR
Sbjct: 445 SESTPELLGKGRDGRPQVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVERFGADALR 504

Query: 327 YFLVREIACGKD 338
           + L R    G D
Sbjct: 505 FTLARGANPGVD 516


>gi|297537354|ref|YP_003673123.1| valyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297256701|gb|ADI28546.1| valyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 944

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 16/122 (13%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH 298
           +D  + +  ++ P+ + V G DI+ F    W A +      ++  +P  K V+ HG I  
Sbjct: 492 IDAQNQALQQYLPSSVLVTGFDIIFF----WVARMVMMTKHITGKIPF-KHVYVHGLIRD 546

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+K+SKS GNV+DPI++I+ +G+D     L+++   G     D + ++KR   +   G
Sbjct: 547 AEGQKMSKSKGNVLDPIDLIDGIGLDD----LIKKRTTGLMNPKDAEKIEKRTRKEFPEG 602

Query: 358 IG 359
           I 
Sbjct: 603 IA 604



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GH +   + D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 62  HMGHGFNQTLMDALTRYHRMKGDNTLWQPGTD-----------HAGIATQIVVERQ 106


>gi|302408275|ref|XP_003001972.1| valyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358893|gb|EEY21321.1| valyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 919

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-- 287
            W  +    ++T G+ +       +F+P  L   G DIL F    W A ++  +L L   
Sbjct: 554 TWFSSGLWPMSTLGWPNTESPDFKQFFPTSLLETGWDILFF----WVARMIMLSLKLTGR 609

Query: 288 ---KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
              K+V+ H  I   +G K+SKSLGNVIDP+++I  + +D L
Sbjct: 610 VPFKEVYCHSLIRDSEGRKMSKSLGNVIDPLDIISGIELDQL 651


>gi|51893951|ref|YP_076642.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51857640|dbj|BAD41798.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 153

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 55/108 (50%)

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E ++++   C+  + E R ++++    +A+  +  L +  +RY + + PW L
Sbjct: 1   MPAGGEPGEREQALARECAAAVGEYRSHLRSVEFRKAVQAMRRLCTLGNRYLEDRAPWNL 60

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            K + +  + VL   + ++R  A+  +  +P  A ++FD L +  + R
Sbjct: 61  VKEDREAGAMVLRTALNLVRIFALAAEPILPFTAQRVFDALQLTPDER 108


>gi|27467786|ref|NP_764423.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|39932185|sp|Q8CSX1|SYI_STAES RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27315330|gb|AAO04465.1|AE016746_255 Ile-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|329736328|gb|EGG72600.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 916

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|332038498|gb|EGI74942.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 942

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q  + VW D+  ++          D  +    PADL++ G D  R  F +    +  ++ 
Sbjct: 535 QDTLDVWFDSGVSHACVV------DAREDLVGPADLYLEGSDQHRGWFMSSMMTSVAING 588

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + P  ++V +HGF +   G K+SKSLGNVI P  V+ ++G D LR ++ 
Sbjct: 589 HAPY-RQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVA 636


>gi|251772855|gb|EES53414.1| Leucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 837

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y      YP+ + H+GH     I D +AR+ R+ G +VL   G D  G     A
Sbjct: 31  RTKPKYYCLEMFPYPSGRIHMGHVRNYSIGDAIARYKRMRGYNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G+    + + N  + ++    L +SYD
Sbjct: 91  AILRGIHPAEWTESNIAHMKEQLQRLGLSYD 121



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 12/190 (6%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L  G K+SKS GNV+DP  +I + G D +R F +      KD  +D   ++  
Sbjct: 576 LLTQGMVLKDGAKMSKSKGNVVDPDHLIAQYGADTVRLFTLFSAPPDKDLSWDDKAVEGA 635

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                   +G L  R  +++ +       +PG    S+ + L   S++ + I     +  
Sbjct: 636 YRF-----LGRLYGRVNALLEEFPQANNDSPGKELTSEATALR--SKIHETIVRVTTDLD 688

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            H  L   I+ + E+    +A   ++     PD     L    E    L  LL  F P +
Sbjct: 689 SHAQLNTAIAALMEL---LNALGSYQALSGEPDAVRGPLL--REGYLTLLTLLSPFAPHI 743

Query: 470 ANKIFDILFV 479
           A+ + + L +
Sbjct: 744 AHHLGERLGI 753


>gi|147856553|emb|CAN82480.1| hypothetical protein VITISV_012746 [Vitis vinifera]
          Length = 380

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           V+ HG I   +G K+SK+LGNVIDPI+ I+E G DALR+ L    A G+D
Sbjct: 17  VYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRFTLALGTA-GQD 65


>gi|313901175|ref|ZP_07834663.1| leucine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954133|gb|EFR35813.1| leucine--tRNA ligase [Clostridium sp. HGF2]
          Length = 799

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++ R  R+ G +VL   G D  G    + 
Sbjct: 30  DKPKCYVLDMFPYPSGNGLHVGHPEGYTATDIVCRMKRMQGHNVLHPMGWDAFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F   N  +FR+    L  SY  D  I TT+  ++   + ++ K+ DKG  
Sbjct: 90  AITTGNHPAEFTKMNIDHFREQIRALGFSYDWDREISTTDPSYYKWTQWIFLKLYDKGLA 149

Query: 120 Y 120
           Y
Sbjct: 150 Y 150



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 47/235 (20%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKIS 304
           K W P DL+V G +    H +Y   W   L    +   K    ++F  G IL    EK+S
Sbjct: 518 KHWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVPTKEPFQRLFHQGMILGENNEKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +++E  G DALR + +          +   GL         +G    + R
Sbjct: 578 KSRGNVVNPDDIVESHGADALRVYEMFMGPLEAALPWSTTGL---------DGARRWLDR 628

Query: 365 SVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            V  +  DYD        FTE+++  L  V    ++++  +++   ++ A++Q++  ++E
Sbjct: 629 -VWRLYTDYD-------KFTEANDGKLDKVYHATVKKVTNDVETLNLNTAISQMMIFINE 680

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               + A+                  + VE  +  A +   F P +  +I+  +F
Sbjct: 681 C---YKAES-----------------IYVEYAKGFAKMFACFAPHMGEEIWSTVF 715


>gi|239948244|ref|ZP_04699997.1| isoleucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922520|gb|EER22544.1| isoleucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 1100

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 91/234 (38%), Gaps = 53/234 (22%)

Query: 290 VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-- 345
              HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG  
Sbjct: 600 CICHGVILDATGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKM 659

Query: 346 ------------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                                  NAD   G  N  S +V                    D
Sbjct: 660 VFDTLRLFIKPIWNAYHFFTMYANADSLKGELNFASENV-------------------LD 700

Query: 388 ESILSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDR 443
             ILS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   
Sbjct: 701 VYILSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKSEKDTDKQN 760

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           A   LY  +E    +AI + A VP ++  I+  L       C  +L  R   G 
Sbjct: 761 AYNALYSCLET---MAIAMSALVPIISEAIYKGL-----RHCEDTLSSRGPSGL 806


>gi|224107153|ref|XP_002314391.1| predicted protein [Populus trichocarpa]
 gi|222863431|gb|EEF00562.1| predicted protein [Populus trichocarpa]
          Length = 981

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G    P     KF PADL++ G D  R  F +    +       P
Sbjct: 544 MDVWFDSGSSWAAVLGKSGGP-----KF-PADLYLEGTDQHRGWFQSSLLTSIATKGKAP 597

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  +IE
Sbjct: 598 Y-TSVITHGFVLDEKGCKMSKSLGNVVDPHTIIE 630



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 26/56 (46%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          E E   +     Y N + H+GHA   I+ DV+ R+  L    V +  G D HG  I
Sbjct: 30 EGEHFVLHDGPPYANGELHMGHALNKILKDVINRYKILQNYKVHYVPGWDCHGLPI 85


>gi|209883517|ref|YP_002287374.1| leucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229559997|sp|B6JAI4|SYL_OLICO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209871713|gb|ACI91509.1| leucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 879

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 17/178 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP ++I   G D  R+F++ +    +D  + ++G++          +  
Sbjct: 635 EKMSKSKRNTIDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVQGANR--FVQRVWR 692

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVIS 419
           LV+ +   + KD      +  A T +D   L S   R L ++ + ++    + A+A++ +
Sbjct: 693 LVNLAAPHLPKD------SAAAGTSADTKPLRSTAHRTLADVSQAIERLRFNTAIAKLYA 746

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V  ++   D  +     K +P  A++V     E +  L  ++   +P LA + ++ L
Sbjct: 747 FVGPLNEAIDDPR----LKADPAWAASVR----EALDMLVRMIAPMMPHLAEQCWEAL 796



 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 10/183 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYRRAKGHNVLHPMGWDAFGMPAENAAM 92

Query: 63  QNAGVTTK---VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           QN     K     +    +  + M   LD + +  I T +  ++   + ++      G +
Sbjct: 93  QNKTHPAKWTYANIAAMKKQLKSMGLSLDWARE--IATCDPSYYKHQQRMFLDFLKAGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V    DG+ + +    V+  E   +FF++S Y ++LL+ 
Sbjct: 151 ERKQSKVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFKISDYSEELLTA 206

Query: 180 YES 182
            ++
Sbjct: 207 LDT 209


>gi|149040954|gb|EDL94911.1| isoleucine-tRNA synthetase 2, mitochondrial (predicted) [Rattus
           norvegicus]
          Length = 427

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF- 72
           Y N  PH+GHA   I+ D++ RFH + G  V F  G D HG  I  K     GV T+   
Sbjct: 117 YANGDPHVGHALNKILKDIVNRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVNTQTLS 176

Query: 73  ---VDQNSRNFRDMA 84
              + + +R+F   A
Sbjct: 177 AMEIREKARSFAQAA 191


>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229753|sp|A3PAV8|SYI_PROM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 968

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++            S+ K+ PADL++ G D    H  ++ + LL++    N
Sbjct: 553 MDVWFDSGSSWAAVCELR-----SELKY-PADLYLEGSDQ---HRGWFQSSLLTSVAVNN 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
            P  KKV +HGF L   G K+SKSLGNV+DP  +I            G D LR + V  +
Sbjct: 604 KPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTDPAYGADVLRLW-VSSV 662

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESIL 391
               D     + LK+   +D+   + N  +R +   + DYD  I +         D+ +L
Sbjct: 663 DYSVDVPIGSNILKQL--SDVYRKVRN-TARYLLGNIHDYDPKIDSFEIDQLPLLDQWML 719

Query: 392 SVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVL 448
                V  +I    +N    +   + Q   +V   + Y D A+    +   +  R  +  
Sbjct: 720 GRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSSKSQFRRRSCQ 779

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQ 487
           +V  +V+  LA+L+   +  +A  I+ +I +   E   FQ
Sbjct: 780 FVMSKVVENLAVLISPVLCHMAEDIWQNIPYSTKEKSVFQ 819



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           Y N   H+GHA   ++ D++ ++  L G  V F  G D HG  I  K  QN
Sbjct: 69  YANGALHMGHALNKVLKDIINKYKTLKGFRVHFVPGWDCHGLPIELKVLQN 119


>gi|309811270|ref|ZP_07705059.1| leucine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434752|gb|EFP58595.1| leucine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 956

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           REK+ I     YP+ A  H+GH    I  DV AR+ R  G +VL+T G D  G    + A
Sbjct: 50  REKVMIQDMFPYPSGAGLHVGHPLGYIATDVYARYQRTQGKNVLYTLGYDAFGLPAEQYA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +   + N  N R     L +S+D
Sbjct: 110 VQTGQHPRKTTEDNMVNMRRQLRQLGLSHD 139


>gi|218131045|ref|ZP_03459849.1| hypothetical protein BACEGG_02648 [Bacteroides eggerthii DSM 20697]
 gi|217986749|gb|EEC53082.1| hypothetical protein BACEGG_02648 [Bacteroides eggerthii DSM 20697]
          Length = 1162

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISY-KAVISNGLVLDKNGNKMSKRLGNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 719 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEE 756


>gi|159481678|ref|XP_001698905.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158273397|gb|EDO99187.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 902

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 22/131 (16%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---ANLPLP-KKVFSHGFIL-HKGEKIS 304
           G     +PADL++ G D    H  ++ + LL+   AN   P K V +HGF+L  +G+K+S
Sbjct: 520 GPPGLAYPADLYLEGSDQ---HRGWFQSSLLTSVAANGVAPYKAVLTHGFVLDERGQKMS 576

Query: 305 KSLGNVIDPIEVIE---------EVGVDALRYFL-----VREIACGKDGFYDKDGLKKRV 350
           KSLGNV+DP  VIE           G D LR ++       ++A G         + ++V
Sbjct: 577 KSLGNVVDPRVVIEGGKDAKSQPAYGADVLRLWVASVDYTSDVAIGGAILKQMADMYRKV 636

Query: 351 NADLANGIGNL 361
              L   +GNL
Sbjct: 637 RGTLRFLLGNL 647



 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 21/44 (47%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          Y N   HIGHA   I+ D + R+  L G    F  G D HG  I
Sbjct: 11 YANGDLHIGHALNKILKDFINRYQLLQGRRAKFVPGWDTHGLPI 54


>gi|71997510|ref|NP_001021875.1| Leucyl tRNA Synthetase family member (lrs-2) [Caenorhabditis
           elegans]
 gi|33300376|emb|CAA98144.4| C. elegans protein ZK524.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 859

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + HIGH     I+D  AR++RL+G +V+   G D  G     AA++ 
Sbjct: 58  KKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYEVIHPIGWDSFGLPAENAARDK 117

Query: 66  GVTTKVFVDQNSRNFR 81
           GV  + +   N  + +
Sbjct: 118 GVDPREWTINNIESMK 133


>gi|83309126|ref|YP_419390.1| leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123768100|sp|Q2WBE4|SYL_MAGMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82943967|dbj|BAE48831.1| Leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 862

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 39  KPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGFNVLHPMGWDAFGLPAENAAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R+    + +SYD    + T E  ++   + ++      G +Y 
Sbjct: 99  QNNVHPAKWTRENIAAMREQLKSMGLSYDWRREVATCEPEYYRHEQKMFLDFLKAGLVYR 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---L 177
           K  +  W  + +    N+  +    DG+ + +     + +  + +F +++AY   L   L
Sbjct: 159 KESWVNWDPVENTVLANEQVI----DGRGWRSGALVEKRLLSQ-WFLKITAYAQDLLDSL 213

Query: 178 SYYESHPEFI 187
           +  E  PE +
Sbjct: 214 ATLERWPERV 223


>gi|315038959|ref|YP_004032527.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312277092|gb|ADQ59732.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 804

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 12/208 (5%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D++AR  R  G +VL   G D  G    + A   G   +V    N  NF
Sbjct: 47  HVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEVVTKNNIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++   G  Y+      +S        +
Sbjct: 107 KRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKNGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEFILPIERRN 194
           +EV  G    G Y   + N  QWM       +++AY D+LL   +    PE +  ++R  
Sbjct: 167 EEVIDGKTERGGYPVYRKNMRQWM------LKMTAYADRLLEDLDGLDWPEPVKEMQRNW 220

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              S        +  S KTFD     PD
Sbjct: 221 IGRSVGAQVTFKIKGSDKTFDIFTTRPD 248



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +VI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQK 689


>gi|218438831|ref|YP_002377160.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226695251|sp|B7KCI7|SYL_CYAP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218171559|gb|ACK70292.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 854

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKYYALSMFPYPSGNLHMGHVRNYVITDVIARLKRMQGHRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +  QN    R     L +S D
Sbjct: 92  ERGIHPAKWTYQNIAQMRQQLQQLGLSID 120


>gi|187918595|ref|YP_001884158.1| valyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119861443|gb|AAX17238.1| valyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 874

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 10/90 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P +  +   DI+ F    W A ++ A L    +V F   +I       KG+K+SKSLG
Sbjct: 475 YYPTNTLITAYDIIFF----WVARMVMAGLEFTGQVPFKDIYITPLLRDKKGKKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           N IDP+E+I++ G DALR+ L      G+D
Sbjct: 531 NGIDPLEIIDQYGSDALRFTLAFLSVQGQD 560



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 13/100 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D+L R+ R+ G + L+  GTD           +AG+ T+   ++  ++F
Sbjct: 52  HMGHALNFTLQDILVRYKRMQGANTLWLFGTD-----------HAGIATQAVFEKQLKDF 100

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               D  D S ++F+    K  +    I+  +I   G  Y
Sbjct: 101 GKSKD--DFSREEFVEEIFKLKNKHREIIVNQIEKLGASY 138


>gi|153807053|ref|ZP_01959721.1| hypothetical protein BACCAC_01330 [Bacteroides caccae ATCC 43185]
 gi|149130173|gb|EDM21383.1| hypothetical protein BACCAC_01330 [Bacteroides caccae ATCC 43185]
          Length = 944

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            A   G    +    N   +R+  D +  S+D    IRT +  ++
Sbjct: 88  YAIQTGQHPAITTINNIDRYREQLDKIGFSFDWNREIRTCDPEYY 132



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAI---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  +
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEYL 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELFNLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          E++ QL I L  F P +  +++D+L
Sbjct: 837 ---------------EILEQLVITLAPFAPHVCEELWDVL 861


>gi|90022211|ref|YP_528038.1| isoleucyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122996062|sp|Q21HK3|SYI_SACD2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89951811|gb|ABD81826.1| Isoleucyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 932

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +N        +PADL++ G D  R  F +    +  ++ + P  
Sbjct: 532 VWFDSGVTHYSVVNARENLR------YPADLYLEGSDQHRGWFQSSLKTSMAINGSAPY- 584

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +   G+K+SKS+GN + P +V+ ++G D LR ++ 
Sbjct: 585 KQVLTHGFTVDADGKKMSKSIGNTVSPQKVMNDLGADVLRLWVA 628



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 63/158 (39%), Gaps = 21/158 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K RE+  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG      
Sbjct: 46  KGREQFILHDGPPYANGDIHIGHAVNKILKDIIIKAKTLSGFDAPYVPGWDCHGLPIEHN 105

Query: 58  IAKAAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTE-------------KRHH 103
           + K    AGV    V   Q  R++      ++    DFIR                K   
Sbjct: 106 VEKKVGKAGVKIDHVAFRQKCRDYARKQ--VEGQKKDFIRLGVLGEWDTPYLTMDFKTEA 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           DT R L  KI + G ++KG    ++S+   +   + EV
Sbjct: 164 DTVRAL-GKIVENGHLHKGFKPVYWSVVGASALAEAEV 200


>gi|314965644|gb|EFT09743.1| isoleucine--tRNA ligase [Propionibacterium acnes HL082PA2]
          Length = 1114

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 115/290 (39%), Gaps = 50/290 (17%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIACGKDGFYDKDGLKKRVN-----------ADLANGIGNLVSRSVSMILKD 372
                 VR++            L  R N           AD   G G +V  +V    + 
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQDDADPVRGFGGVVPPAVDS--RG 739

Query: 373 YDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           + G++P   A T+    D  ++   + +++++ E + N    R    +   V E+  ++ 
Sbjct: 740 FGGVVPP--AVTQRHVLDRWLVGATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNWYV 797

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 RRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 843


>gi|261328970|emb|CBH11948.1| valyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 975

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+     G   +F+P  L   G DIL F    W A ++  +L  
Sbjct: 490 VLDTWFSSAMWPFSTMGW-PAETGDTQRFFPGSLMETGHDILFF----WVARMVMTSLHF 544

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
              LP  +VF H  +  K GEK+SKS GNVIDP+ +I  V ++AL
Sbjct: 545 TGKLPFSEVFLHAMVRDKNGEKMSKSKGNVIDPLFIISGVSLEAL 589



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    + D L RFHR+ G D L+  GTD           +AG+ T+V V++  R  
Sbjct: 60  HIGHALTGAVQDALIRFHRMKGDDTLYLPGTD-----------HAGIATQVVVEK--RLM 106

Query: 81  RDMADVL-DISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           ++      D+  ++F++       + C ++ +++   G
Sbjct: 107 KESGKSRHDVGREEFLKQVWAFKENHCGVITRQLRRIG 144


>gi|149928114|ref|ZP_01916361.1| leucyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823200|gb|EDM82437.1| leucyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 881

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 16/183 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y  + + YP+ + H+GH     I DV+ R  R+ G + L   G D  G     A
Sbjct: 36  KQKPKYYCVSMLPYPSGKLHMGHVRNYTINDVMIRQKRMKGYNTLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   G     +    +D   +    M   +D S +  + T +  ++   + L+ K+ +KG
Sbjct: 96  AMANGKPPAAWTYSNIDYMKKQMESMGLAIDWSKE--VATCKPDYYKWNQWLFLKMLEKG 153

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            +YK   +  +   D+    +++V  G     G     +  P+       Y+  ++ Y D
Sbjct: 154 IVYKKTGTVNWDPIDQTVLANEQVIDGKGWRSGAVVEKRDIPM-------YYMAITDYAD 206

Query: 175 KLL 177
            LL
Sbjct: 207 VLL 209



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 17/94 (18%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L  T Y +  +G K    PAD+ V   D  R               P+  K+ + G  +H
Sbjct: 586 LNDTYYTEEANGKKTWINPADVSVEFDDKGR---------------PVSAKLSNSGAPVH 630

Query: 299 KG--EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            G  EK+SKS  N IDP  +I++ G D  R F +
Sbjct: 631 IGGVEKMSKSKNNGIDPQALIDQYGADTARLFTM 664


>gi|300859016|ref|YP_003783999.1| valyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686470|gb|ADK29392.1| valyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331268|gb|ADL21462.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 918

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 16/114 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK---------------KVFSHGFILH 298
           KF+P  + V   DIL F       F   A+   P+                +F HG +  
Sbjct: 497 KFYPTSVLVTAYDILFFWVARMMMFGTLASESTPELLGKGRDGRPQVPFTDLFLHGLVRD 556

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           + G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N
Sbjct: 557 EHGRKMSKSLGNGIDPMDWVERFGADALRFTLARGANPGVDLPVGEDSAQSSRN 610


>gi|294155496|ref|YP_003559880.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599965|gb|ADE19461.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 779

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 38/86 (44%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I D +ARF+R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGNVHMGHVRNYTIGDAIARFYRRKGFNVLHPFGWDAFGLPAENAAIKN 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY 91
           G+  K +  +N          L IS+
Sbjct: 93  GIHPKDWTYKNIEKMNKEIKKLGISF 118



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + G +L  G K+SKS GNV+ P ++I+E G D  R F++
Sbjct: 529 LLTQGMVLKDGSKMSKSKGNVVVPSDMIKEYGADVTRLFIL 569


>gi|268592786|ref|ZP_06127007.1| valine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311568|gb|EFE52021.1| valine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 964

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N D  K  F P D+ V G DI+ F    W A ++   +  
Sbjct: 485 VLDTWFSSGLWTFSTLGWPENTDALKT-FHPTDVLVSGFDIIFF----WIARMIMMTMHF 539

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I   +G+K+SKS GNVIDP+++I+ +              
Sbjct: 540 IKDENGEPQVPFKTVYMTGLIRDEEGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMM 599

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 600 QPQLAEKIAKRTRKEYPEGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 657

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +  D G      +F+ +D  I++  ++ ++  RE +       A   
Sbjct: 658 LWN-ASRFVLMNTEGQDCGQNGGEMSFSLADRWIMAQFNQTVKAYREALDTHRYDIAAGI 716

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 717 LYDFTWNEFCDWYLELSKP-AVHKGNEAQVRAARFTLIEVLEGLLRLAHPIIPFITETIW 775



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+ TGTD           +AG+ T++ V++
Sbjct: 62  HMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTD-----------HAGIATQMVVER 105


>gi|294674108|ref|YP_003574724.1| valine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472463|gb|ADE81852.1| valine--tRNA ligase [Prevotella ruminicola 23]
          Length = 902

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 28/208 (13%)

Query: 147 GQYYNAQHNPVQWME--EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK--S 202
            +Y N   N   W+E  ++    R   +  ++ +YY    +F++  E   E +   +  S
Sbjct: 405 AKYKNTYKN---WLENIQDWCISRQLWWGHRIPAYYYDEEKFVVA-ETAEEALELARKES 460

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G  +L +S    D   +   D  +  ++W  +L + + T G     +     ++P    V
Sbjct: 461 GNANLQMSDLKQD---EDALDTWFSSWLWPISLFDGINTPG-----NEEIKYYYPTSDLV 512

Query: 263 IGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIE 315
            G DI+ F    W A ++ A        P  K V+  G +  K G K+SKSLGN  DPIE
Sbjct: 513 TGPDIIFF----WVARMIMAGEEYMGTFPF-KNVYFTGIVRDKLGRKMSKSLGNSPDPIE 567

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDK 343
           +IE+ G D +R  ++     G D  +D+
Sbjct: 568 LIEKFGADGVRMGMMLSAPAGNDILFDE 595


>gi|50122797|ref|YP_051964.1| isoleucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827008|sp|Q6D0C3|SYI_ERWCT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49613323|emb|CAG76774.1| isoleucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 937

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 25/213 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K+PD     + VW D+ + + +         G +A     D+++ G D  R  F +   
Sbjct: 525 VKVPD----TLDVWFDSGSTHASVVDVRPEFGGHEA-----DMYLEGSDQHRGWFMSSLM 575

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +  +    P  ++V +HGF +  +G K+SKS+GN + P +V+ ++G D LR ++     
Sbjct: 576 ISTAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWIGSTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV- 393
            G+    D+  + KR +AD    I N    +   +L + +G  P   +    D  +L   
Sbjct: 635 SGEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPQKDSVKPEDMVVLDRW 687

Query: 394 ---CSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C++  Q EI E  ++   HR + +++   S
Sbjct: 688 AVGCAKAAQDEILEAYESYDFHRVVQRLMQFCS 720


>gi|75391303|sp|Q846V6|SYI_STAEP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29123080|gb|AAO65848.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
          Length = 871

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 25/228 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R + V       D    
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLW-VSSTDYLSDVRIS 634

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + LKK   +D+   I N    ++  +L + +   P   +  E++  +L V   +L  +R
Sbjct: 635 DEILKK--TSDVYRKIRN----TLRFMLGNINDFNPETDSIAETN--LLEVDRYLLNRLR 686

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           E   + + +      +++  EV  + +     EL     D    +LY+
Sbjct: 687 EFTASTINNYENFDYLNIYQEVQNFINV----ELSNFYLDYGKDILYI 730



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|329956385|ref|ZP_08296982.1| leucine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524282|gb|EGF51352.1| leucine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 960

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142


>gi|298372880|ref|ZP_06982870.1| isoleucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275784|gb|EFI17335.1| isoleucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 512

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 12/168 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  + ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 9   EVFPADFISEGVDQTRGWFFTLHAISTMIKGSVAF-KNVISNGLVLDKNGNKMSKRLGNA 67

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP   IE  G D LR++++   +   +  +D +G+++ V       + N  + S   + 
Sbjct: 68  VDPFSTIETFGSDPLRWYMMTNSSPWDNLKFDVEGVEE-VRRKFFGTLYN--TYSFFALY 124

Query: 371 KDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRA 413
            + DG  P           E D  I+S+ + +++E+ E+ ++    RA
Sbjct: 125 ANVDGFTPAEKEIPLSERPEIDRWIVSLLNSLVKEVAEHYEHYEPTRA 172


>gi|302519020|ref|ZP_07271362.1| leucyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427915|gb|EFK99730.1| leucyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 966

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+    H+GH    I  DV AR+ R+ G +VL T G D  G    + A
Sbjct: 63  RPKKYVMDMFPYPSGSGLHVGHPLGYIATDVFARYQRMTGHNVLHTLGFDAFGLPAEQYA 122

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++  + N  N R     L + +D
Sbjct: 123 VQTGTHPRISTEANMANMRQQLRRLGLGHD 152


>gi|255514065|gb|EET90328.1| valyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 813

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
           VW+D+    L   G+ +N D     F PA + + G DI+R  A Y  +   +L  + P  
Sbjct: 451 VWVDSSITPLIIAGWPENKDLMNRAF-PASIRIQGTDIIRTWAFYTIFRTSILGGDKPFE 509

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             + S       G ++ KS GN +DP ++I +  +D++R +       GKD
Sbjct: 510 AIITSGMIQGTDGREMHKSFGNGVDPKDLIAKYSIDSVRLWAALSGNIGKD 560


>gi|209876528|ref|XP_002139706.1| valyl-tRNA synthetase [Cryptosporidium muris RN66]
 gi|209555312|gb|EEA05357.1| valyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
          Length = 1045

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 7/88 (7%)

Query: 244 YLDNPDGSK---AKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL- 297
           Y  NP   K   + F+P  L   G DIL F    +   ++  +  LP  K V+ H  +  
Sbjct: 554 YKLNPRTGKDDLSTFFPTTLLETGSDILFFWVARMVMLSYACTGKLPF-KTVYLHAMVRD 612

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            +G K+SKSLGNVIDP+EVIE + ++ L
Sbjct: 613 AQGRKMSKSLGNVIDPLEVIEGISLEDL 640


>gi|295838940|ref|ZP_06825873.1| leucine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695496|gb|EDY42429.1| leucine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 966

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R K Y+     YP+ A  H+GH    I  DV AR+ R+ G +VL T G D  G    
Sbjct: 60  LAARPKKYVMDMFPYPSGAGLHVGHPLGYIATDVFARYQRMTGHNVLHTLGFDAFGLPAE 119

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   ++  + N  N R     L + +D
Sbjct: 120 QYAVQTGTHPRISTEVNMANMRQQLRRLGLGHD 152


>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 922

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PADL++ G D  R  F++    +  ++   
Sbjct: 523 IMDVWFDSGSSH---QGVL----VERGMKYPADLYLEGSDQHRGWFNSSLITSVAINGFA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF+L  +G K+SKSLGNVI P +V+++ G D LR ++
Sbjct: 576 PY-KGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMDQYGADILRLWV 620



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   ++ D++ R   + G  V +  G D HG  I +A  N GV  K   +
Sbjct: 59  YANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIEQALTNKGVKRK---E 115

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRILWK------------KISDKG 117
            +   FR +      + +D   + F R   + + +   I  K            K+++KG
Sbjct: 116 MSVAAFRQLCEEYAYEQIDNQRNQFRRLGIRGNWENPYITLKPEFEARQIEVFGKMAEKG 175

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 176 YIYKGLKPVYWSPSSESALAEAEI 199


>gi|157787151|ref|NP_001099171.1| probable leucyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|156229821|gb|AAI51832.1| Zgc:165522 protein [Danio rerio]
          Length = 891

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 7/186 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+ +   YP+ + H+GH     I+D ++ F ++ G  VL   G D  G     AA 
Sbjct: 68  RKKFYVLSMFPYPSGRLHMGHVRVYAISDTISHFQKMRGHQVLNPMGWDAFGLPAENAAI 127

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              +  + +   N  + R   D L +  ++D  I T    ++   + L+ K+ + G  Y 
Sbjct: 128 ERNLDPEDWTRSNIESMRTQLDSLGLCFNWDREITTCLPDYYKWTQYLFIKMFEAGLAYQ 187

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K     W  + D+    D++V +        A   PV+    + +F + + Y   LL   
Sbjct: 188 KEALVNWDPV-DQTVLADEQVDENGCSWRSGA---PVEQKMLKQWFIKTTNYAKPLLDAL 243

Query: 181 ESHPEF 186
              PE+
Sbjct: 244 ADLPEW 249


>gi|71997517|ref|NP_001021876.1| Leucyl tRNA Synthetase family member (lrs-2) [Caenorhabditis
           elegans]
 gi|30962533|dbj|BAC76733.1| leucyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
 gi|33300375|emb|CAE18063.1| C. elegans protein ZK524.3b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 828

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + HIGH     I+D  AR++RL+G +V+   G D  G     AA++ 
Sbjct: 27  KKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYEVIHPIGWDSFGLPAENAARDK 86

Query: 66  GVTTKVFVDQNSRNFR 81
           GV  + +   N  + +
Sbjct: 87  GVDPREWTINNIESMK 102


>gi|127511856|ref|YP_001093053.1| valyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|126637151|gb|ABO22794.1| valyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 959

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 127/325 (39%), Gaps = 72/325 (22%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           ++   D  + +  DP  ++  W  +     +T G+ D+ +  K  F P D+ V G DI+ 
Sbjct: 456 AKHNLDDSVVLRQDPD-VLDTWFSSALWTFSTLGWPDDTEALKT-FHPTDVLVTGFDIIF 513

Query: 270 FHAIYWPAFLLSANL----------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           F    W A ++   +           +P K V+  G I   +G K+SKS GNV+DP+++I
Sbjct: 514 F----WVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDEQGNKMSKSKGNVLDPLDMI 569

Query: 318 EEV-------------------------------------GVDALRYFLVREIACGKDGF 340
           + +                                     G DALR+ L    + G+D  
Sbjct: 570 DGIDLEALVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHGTDALRFTLAAMASTGRDIN 629

Query: 341 YDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTESDESIL 391
           +D     KR++      N I N  SR V M  ++ D    +P          + +D  I+
Sbjct: 630 WD----MKRLDGYRSFCNKIWN-ASRYVLMNTEEQDCGPQSPNGKADGEMQLSLADRWIV 684

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
            + ++ ++   E+M+N     A   +         D Y +  KP     T  ++  T  +
Sbjct: 685 GLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQFCDWYLELTKPVLQNGTEAEQRGT-RH 743

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
             V V+  +  LL   +P L   I+
Sbjct: 744 TLVTVLEAMQRLLHPMMPYLTETIW 768



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA++  I D L R+ R+ G + L+  GTD           +AG+ T++ V++
Sbjct: 49 HMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTD-----------HAGIATQMLVER 92


>gi|302206715|gb|ADL11057.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
          Length = 911

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 16/114 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK---------------KVFSHGFILH 298
           KF+P  + V   DIL F       F   A+   P+                +F HG +  
Sbjct: 490 KFYPTSVLVTAYDILFFWVARMMMFGTLASESTPELLGKGRDGRPQVPFTDLFLHGLVRD 549

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           + G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N
Sbjct: 550 EHGRKMSKSLGNGIDPMDWVERFGADALRFTLARGANPGVDLPVGEDSAQSSRN 603


>gi|261415562|ref|YP_003249245.1| leucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372018|gb|ACX74763.1| leucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327337|gb|ADL26538.1| leucine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 895

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+ A  H+GH       D++ R+ R  G +VL   G D  G    +
Sbjct: 29  KSKPKYYCLDMFPYPSGAGLHVGHPEGYTATDIICRYKRSRGFNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
            A   G    +   +N  NFR     L +SYD    + TT+ +++   + ++K++
Sbjct: 89  YAIQTGTHPAITTKKNCDNFRRQIKRLGLSYDWNKEVNTTDPKYYKWTQWIFKRL 143


>gi|217032112|ref|ZP_03437612.1| hypothetical protein HPB128_16g72 [Helicobacter pylori B128]
 gi|298735618|ref|YP_003728143.1| isoleucyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946260|gb|EEC24868.1| hypothetical protein HPB128_16g72 [Helicobacter pylori B128]
 gi|298354807|emb|CBI65679.1| isoleucyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 922

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 57/308 (18%)

Query: 60  KAAQNAGVTTKVFVDQN---SRNFRDMADVLDISYDDFIRTTEKRH-HDTCRILWKKISD 115
           K   + G+  K  +D++      F+    +++   D  +   E  H +  C   W+  + 
Sbjct: 351 KGCYDEGIIHKKLLDESYLGEHVFKAQKRIIEQLGDSLLLEQEIEHSYPHC---WR--TH 405

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           K  IY+   + W+ L DE +  +D    G+         N ++ +E     F  S+ +++
Sbjct: 406 KPVIYRAT-TQWFILMDEPFIQND----GSQKTLREVALNAIEKVE-----FVPSSGKNR 455

Query: 176 LLSYYESHPEFILP------------IERRNEVISFVKSGLKDLS--LSRKTFD--WGIK 219
           L +  E+ P++ L             I++R     F    L+ ++    +K  D  W   
Sbjct: 456 LKTMIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHVANLFEKKGCDVWWESS 515

Query: 220 IPD--DPQY------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           + D   P Y            I+ VW D+ + +      L++  G+K +  P+D+ + G 
Sbjct: 516 VKDLLPPSYQDNAKHYEKIMHILDVWFDSGSTF---KAVLEDYHGAKGQS-PSDVILEGS 571

Query: 266 DILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGV 322
           D  R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G 
Sbjct: 572 DQHRGWFQSSLLIGCVLNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGS 630

Query: 323 DALRYFLV 330
           D +R ++ 
Sbjct: 631 DVVRLWVA 638


>gi|224534130|ref|ZP_03674710.1| isoleucine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514555|gb|EEF84869.1| isoleucine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 1042

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 7/228 (3%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTSLFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMIL 370
           P+EVI   G DALR +L+       D     D   + V  ++   I N  S   + ++I 
Sbjct: 605 PMEVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIID 664

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K               D+ I+S    + + +   +    + +++  ++  + +++ ++  
Sbjct: 665 KFQPPKNLNLVKNNNLDKWIISELESLKKILNNEIDKYNLTKSIESLLEFIDKLNNWYIR 724

Query: 431 QKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
           +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 725 RSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|315635950|ref|ZP_07891211.1| isoleucine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479734|gb|EFU70406.1| isoleucine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 914

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 11/116 (9%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW D+ +   T    L + +     F PAD+++ G D  R  F +   
Sbjct: 523 PDDLEKTLDILDVWFDSGS---TQNAVLRSRNYDAGTF-PADMYLEGSDQHRGWFQSSLL 578

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              L S+ +   K + +HGF +  KGEK+SKS GNV+ P +VI+E G + LR ++ 
Sbjct: 579 TT-LASSEIAPYKSILTHGFTVDEKGEKMSKSKGNVVAPDKVIKEYGSEILRLWVA 633



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ D++ +FH  +G  + +  G D HG  I +  +
Sbjct: 63  YANGNIHIGHALNKILKDIINKFHYFEGKSIRYVPGWDCHGLPIEQKVE 111


>gi|295100369|emb|CBK97914.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii L2-6]
          Length = 849

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   +N  +FR+    L  S+  D  I TT+  ++   + ++ ++  KG  
Sbjct: 89  AMKNHIHPAIVTKKNVDHFREQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           YK   +  +    +    ++EV  G   +  +   + V  QWM       +++AY DKL+
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWM------LKITAYADKLI 202



 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKSLGNVI+P EV+++ G D +R +
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLY 650


>gi|227357026|ref|ZP_03841397.1| valyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227162829|gb|EEI47789.1| valyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 962

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N +  K  F P ++ V G DI+ F    W A ++   +  
Sbjct: 483 VLDTWFSSALWTFSTLGWPENTEALKT-FHPTNVLVSGFDIIFF----WIARMIMMTMHF 537

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I   +G+K+SKS GNV+DP+++I+ +              
Sbjct: 538 IKDDEGKPQVPFKTVYMTGLIRDEEGQKMSKSKGNVLDPLDMIDGITLDKLLEKRTGNMM 597

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 598 QPQMAERIAKRTKKEFPEGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 655

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +D D G       F+ +D  IL+  +  ++  RE + N     A   
Sbjct: 656 LWN-ASRFVLMNTEDQDCGYQGGEMTFSLADRWILAEFNNTIKAYREALDNYRFDIAAGI 714

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 715 LYEFTWNQFCDWYLELSKP-AVHKGNDAQKRAARHTLIEVLEGLLRLAHPIIPFITETIW 773



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+  GTD           +AG+ T++ V++
Sbjct: 60  HMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTD-----------HAGIATQMVVER 103


>gi|156847411|ref|XP_001646590.1| hypothetical protein Kpol_1055p89 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117268|gb|EDO18732.1| hypothetical protein Kpol_1055p89 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 753

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +Y+ +   YP+   H+GH    +I+DVL RF++L+G +VL   G D  G     AA    
Sbjct: 64  IYVLSMFPYPSGTLHLGHLRVYVISDVLNRFYKLNGYNVLHPMGWDSFGLPAENAAIERR 123

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
           +    +  QN    +D    +  ++D
Sbjct: 124 INPADWTIQNISKMKDQMKCMLANFD 149


>gi|56460236|ref|YP_155517.1| isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821756|sp|Q5QZS6|SYI_IDILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56179246|gb|AAV81968.1| Isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 944

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 19/233 (8%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPADL++ G D  R  F +       +    P   +V +HGF +  +G K+SKS+GNV+ 
Sbjct: 561 WPADLYLEGSDQHRGWFQSSLVTGVAMYDEAPY-HQVLTHGFTVDAQGRKMSKSIGNVVA 619

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P +V+ ++G D LR ++      G+    D+  + KR +AD    I N  SR +   L  
Sbjct: 620 PQDVMNKLGGDILRLWVASADYSGEMTVSDE--ILKR-SADAYRRIRN-TSRFLLANLSG 675

Query: 373 YDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYF- 428
           +D    +       E D  I+   + +  E+ E   N   H  + +++   S E+  ++ 
Sbjct: 676 FDPKQDLVAKEDMVELDRWIVGRAADLQNELLEAYNNYQFHSVVQKLMHFCSIELGSFYL 735

Query: 429 ----DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Q   + +        T LY   E + +    + +F    A +I+D+L
Sbjct: 736 DIIKDRQYTAKSEGLARRSCQTALYHIAEALVRWMAPICSFT---AQEIWDLL 785



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 19/136 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           + K  +     Y N Q HIGHA   I+ DV+ +   L   D  +  G D HG  I  +  
Sbjct: 48  KPKFILHDGPPYANGQIHIGHAVNKILKDVIVKAKTLSDFDAPYVPGWDCHGLPIELQVE 107

Query: 63  QNAGVTTKVF----------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +  G   K                  +DQ   +F+ +  VL    + ++    K+  D+ 
Sbjct: 108 KKHGKPGKKLNLAEFREKCREYAMTQIDQQRTDFKRLG-VLGDWDNPYLTMNFKQEADSV 166

Query: 107 RILWKKISDKGDIYKG 122
           R L  KI D G +++G
Sbjct: 167 RAL-AKIIDNGHMHQG 181


>gi|87302693|ref|ZP_01085504.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
 gi|87282576|gb|EAQ74534.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
          Length = 883

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 2/119 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 48  DTFYALSMFPYPSGNLHMGHVRNYVITDVIARVQRLRGRQVLHPMGWDAFGLPAENAAIE 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            GV    + D N    R     L +S  +D  + T    ++   + L+ +  + G  Y+
Sbjct: 108 RGVDPGDWTDANIAQMRAQLQRLGLSIDWDREVATCHADYYRWTQWLFLQFHEAGLAYR 166



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 23/181 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        +  
Sbjct: 639 EKMSKSKYNGVDPAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLWR 696

Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           LV  +V+  L+     +PT PGA  E+        ++  QE+R     + +H A+A +  
Sbjct: 697 LVDGAVARGLR-----LPTPPGAPAEA-------STQAEQELR-----RAVHGAIAAIDD 739

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++     F+      +K +N   A   +    V  E +  L ILL  F P LA +++  
Sbjct: 740 DLAPGHYQFNTAVSELMKLSNVMAAQLEAAGEPVASEALSALVILLAPFAPHLAEELWQR 799

Query: 477 L 477
           L
Sbjct: 800 L 800


>gi|297626062|ref|YP_003687825.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921827|emb|CBL56387.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 842

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 16/199 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R++ Y+     YP+   H+GHA    + DVLAR  R+ G +V+   G D  G     AA
Sbjct: 48  KRQRRYVLDMFPYPSGDLHMGHAEAYAMGDVLARSWRMQGFNVMHPIGWDSFGLPAENAA 107

Query: 63  ----QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
               ++    T   +    ++F+     LD S +  + T+++ ++   + L+ +   KG 
Sbjct: 108 IKNNEHPARWTYENIATQKKSFQRYGLSLDWSRE--LHTSDEEYYHWTQWLFIQFFKKGL 165

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y K  Y  W   +D+    +++V +G   +        V   E + ++FR++ Y  +LL
Sbjct: 166 AYQKDGYVNWCP-KDQTVLANEQVKEGRCERCGTL----VTKRELKQWYFRITEYAQRLL 220

Query: 178 ---SYYESH-PEFILPIER 192
              +  E   PE +L ++R
Sbjct: 221 DDMAQLEGKWPERVLAMQR 239



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 25/232 (10%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAF------LLSANLPLP-KKVFSHGFILHKGEKISK 305
           A++ P D ++ G +    H +Y   F      L   +   P  ++ + G ++++G+ +SK
Sbjct: 544 ARWAPVDQYIGGAEHATMHLLYARFFTKVLKDLGMIDFVEPFTRLLNQGQVINQGKAMSK 603

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN ++  E +++ GVDA+R  +V   A   D   D   L  + +         L    
Sbjct: 604 SLGNGVNLGEQLDKYGVDAVRLTVV--FAGPPDEDIDWADLSPKSSLRFLQRAHRLAGEV 661

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            S +     G  P  G     D  +     + + EI + +     + A+A+++ LV+   
Sbjct: 662 TSPL-----GADPASG-----DRPLRRATHKAISEITDLLAAGRFNVAIARIMELVNATR 711

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  D         +N       +   VE I Q    L  F P ++ +++++L
Sbjct: 712 KTVDGHN---APNSNAGSDDPAVREAVEFIAQ---ALSLFAPYVSEEMWEVL 757


>gi|282601228|ref|ZP_05981133.2| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569765|gb|EFB75300.1| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 853

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+A   H+GH       D++AR  R  G +VL+  G D  G      A
Sbjct: 36  KPKFYALVEFPYPSAAGLHVGHPRSYTALDIVARKKRQCGYNVLYPMGWDAFGLPTENYA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  ++   +N   F+     L +S+  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 96  LKNHINPEIVTAKNVARFKSQLQALGLSFDWDREINTTDPEYYKWTQWIFLQLYKKGLAY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  Y    +    ++EV  G   +  +   Q    QWM       +++AY D+L+
Sbjct: 156 KKETTVNYCTGCKVVLANEEVVNGVCERCGSPVVQKVKSQWM------LKITAYADRLI 208



 Score = 36.6 bits (83), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 21/27 (77%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKSLGNV++P +V+ E G D LR +
Sbjct: 630 KMSKSLGNVVNPDDVVNEYGADTLRLY 656


>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782408|sp|B8CWL4|SYI_HALOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 929

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 16/110 (14%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+ +++   L T  +L          WP+ L++ G D  R  F++    A    
Sbjct: 530 IMDVWFDSGSSHKAVLETRDHLS---------WPSQLYLEGTDQYRGWFNSSLLTAVATE 580

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  + V ++GF++  KG K+SKS+GNV+ P +VI+  G D LR ++ 
Sbjct: 581 GKPPY-EAVVTNGFVVDDKGNKMSKSIGNVVSPQDVIKRYGADILRLWVA 629



 Score = 37.4 bits (85), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R+  L G    +  G D HG  I
Sbjct: 58  YANGDIHIGHALNKILKDIVTRYKTLSGYYSPYVPGWDTHGLPI 101


>gi|163734313|ref|ZP_02141753.1| leucyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161392321|gb|EDQ16650.1| leucyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 883

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 65  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAA 124

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N ++ RD    L +S D   +F  T +  ++   + L+    + G +
Sbjct: 125 MAIGGHPKDWTYGNIKDMRDQMKPLGLSIDWSREFA-TCDPEYYGQQQSLFLDFLNAGLV 183

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  + D     +++V +G  G    A    V+  E   +FF++S + ++LLS
Sbjct: 184 YRKNAIVNWDPV-DMTVLANEQVEQGR-GWRSGAL---VERRELTQWFFKISDHSEELLS 238

Query: 179 YYES 182
             ++
Sbjct: 239 ALDT 242


>gi|330993124|ref|ZP_08317062.1| Leucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759894|gb|EGG76400.1| Leucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 877

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 43  DRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRARGFSVLHPMGWDAFGLPAENAA 102

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           +  GV    +   N    R     L  S++
Sbjct: 103 RERGVHPGQWTMDNIAAMRTTLKRLGFSFN 132



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 9/132 (6%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P+ +IE  G D  R+F++ +    +D  + + G+        A     
Sbjct: 632 EKMSKSKRNTVAPVAIIERFGADTARWFVLSDSPPERDMEWTESGVAA------AARFLQ 685

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R V  + +        P   + S +++     R +  + E +++   + A+A++  L
Sbjct: 686 RVFRIVRTVAEQVPAGTACPATLSRSADALRRATHRTIAAVTEALESFSANVAVARLHEL 745

Query: 421 VSEVDRYFDAQK 432
            S +    DA+K
Sbjct: 746 TSALA---DAEK 754


>gi|329910003|ref|ZP_08275186.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546321|gb|EGF31342.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 883

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 12/185 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  + + YP+ + H+GH     I DV+ R  R++G +VL   G D  G     AA
Sbjct: 37  DKKKFYACSMLPYPSGKLHMGHVRNYTINDVMYRHLRMNGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR--HHDTCRILWKKISDKGDIY 120
               V    +   N  + +     + ++ D     T  +  ++   + ++ K+ +KG +Y
Sbjct: 97  MANNVPPAQWTYANIAHMKQQMQAMGLAIDWSREMTACKPDYYKWNQWMFLKMLEKGIVY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P+       Y+ R++ Y ++LL
Sbjct: 157 KKTGTVNWDPIDQTVLANEQVVDGRGWRSGALIEKREIPM-------YYARITDYAEELL 209

Query: 178 SYYES 182
            + ++
Sbjct: 210 DHVDN 214


>gi|326333915|ref|ZP_08200146.1| leucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948276|gb|EGD40385.1| leucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 827

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 16/179 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           EK Y  T   YP+   H+GHA    + DVLAR+  L G DVL   G D  G     AA  
Sbjct: 39  EKRYALTMFPYPSGDLHMGHAEVTALHDVLARYWWLKGFDVLNPIGWDSFGLPAENAAIK 98

Query: 63  --QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +N    T   ++  + +F+      D S    + T++  ++   + ++ K+ + G  Y
Sbjct: 99  RNENPAGWTYANIETQAESFKRYGISFDWSRR--LHTSDPEYYKWTQWIFLKLYEAGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKL 176
           +      +   D+    +++V  G + +   A   + +  QW      +FR +AY ++L
Sbjct: 157 RKKSPVNWCPNDQTVLANEQVVNG-ECERCGATVTKRDLTQW------YFRTTAYAEEL 208



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 36/250 (14%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPK 288
           YL+ T          A+ W P D ++ G +    H +Y   F        L+  + P   
Sbjct: 521 YLSPTDETQAFSSEAAREWGPVDFYLGGDEHAVLHLLYARFFTKALRDIGLIDWDEPF-S 579

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              S G +++ G+K+SKSLGN ++  +V+EE GVDA R  LV   A   +   D      
Sbjct: 580 AYLSQGKVINGGKKMSKSLGNGVNLSDVLEEFGVDATRLTLV--FASPPEDNIDW----- 632

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQN 407
              AD++ G      +    +  D   +   PG +F + D ++  V  + + E  + +++
Sbjct: 633 ---ADVSPGGSAKFLQRAWRLAGD---VTSEPGVSFDDGDVALRRVTHKTVAEAEQLIES 686

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +  +A+V+ LV+   +  D+     +   +P           E    +AILL    P
Sbjct: 687 YRFNVVVARVMELVNATRKAIDSG----VGPADP--------AVREAAETVAILLSLVAP 734

Query: 468 KLANKIFDIL 477
             A ++++ L
Sbjct: 735 YTAEEMWERL 744


>gi|213962388|ref|ZP_03390651.1| isoleucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955054|gb|EEB66373.1| isoleucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 1135

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 256 WPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           +PAD    G D  R      HAI    F    N    K V S+G +L K G+K+SK LGN
Sbjct: 635 YPADFIAEGVDQTRGWFYTLHAIATSVF----NSVAYKNVVSNGLVLDKNGQKMSKRLGN 690

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            +DP   I E G DA R++++       +  +D +G+
Sbjct: 691 AVDPFTTIAEYGADATRWYMISNANPWDNLKFDLEGV 727


>gi|167764004|ref|ZP_02436131.1| hypothetical protein BACSTE_02387 [Bacteroides stercoris ATCC
           43183]
 gi|167698120|gb|EDS14699.1| hypothetical protein BACSTE_02387 [Bacteroides stercoris ATCC
           43183]
          Length = 945

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKM 142


>gi|94311817|ref|YP_585027.1| isoleucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987847|sp|Q1LJB8|SYI_RALME RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|93355669|gb|ABF09758.1| isoleucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 959

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)

Query: 230 VWIDALTNYLTTT----------GYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPA 277
           VW D+ T + T               D PDG  A     DL++ G D  R  FH+    A
Sbjct: 554 VWFDSGTTHWTVIRGSHRDELYDPAADLPDGRLA-----DLYLEGSDQHRGWFHSSLLTA 608

Query: 278 FLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +L    P  K + +HGF +  +G K+SKS+GN + P ++  ++G + +R ++      G
Sbjct: 609 SMLYGKPPY-KALLTHGFTVDGEGRKMSKSVGNTVSPQDISNKMGAEIIRLWVASTDYSG 667

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSV 393
           +    D+  + KRV  +    I N + R +   L DYD     +P    + E D   +++
Sbjct: 668 ELSISDE--ILKRV-VEGYRRIRNTL-RFLLANLTDYDHAKHALPA-SEWLEIDRYAVAL 722

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             R+ +E+  + Q    H  +A++ +  SE
Sbjct: 723 TDRLQKEVLSHYQAYEFHPVVAKLQTFCSE 752



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +K  +     Y N   HIGHA   ++ D++ +   L GLD ++  G D HG  I
Sbjct: 57  KKFVLHDGPPYANGDIHIGHAVNKVLKDMIIKARGLTGLDAVYVPGWDCHGMPI 110


>gi|323457245|gb|EGB13111.1| hypothetical protein AURANDRAFT_19010 [Aureococcus anophagefferens]
          Length = 1109

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 22/141 (15%)

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAK-------FWPADLHVIGKDI--------LRFHAI 273
           YV++    +     G    PD   AK       ++P DL V GKD+        L  HA 
Sbjct: 663 YVYVTGAPHPAAVDGSCAVPDDLLAKMRAEFQYWYPMDLRVSGKDLIGNHLTMCLYNHAA 722

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            WP     A    P+ ++++GF+L  GEK+SKS GN +   E       DA+R+ L    
Sbjct: 723 IWPD---EAATRWPRSMYTNGFVLLDGEKMSKSTGNFLMLDEACALYSADAVRFAL---- 775

Query: 334 ACGKDGFYDKDGLKKRVNADL 354
           A   D   D +  +KR +  +
Sbjct: 776 ADAGDSLEDANFERKRADGAI 796



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 28/55 (50%)

Query: 10 STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          S+   Y N + H+GHA+ +  A+  A F RL G +VLF  G    G  I  AA  
Sbjct: 38 SSRYPYMNGRLHLGHAFSLTKAEFAASFKRLQGYNVLFPFGFHCTGMPIQAAANK 92


>gi|319943230|ref|ZP_08017513.1| isoleucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743772|gb|EFV96176.1| isoleucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 953

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 9/126 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T + T        D +    +PADL++ G D  R  FH+    + +++ + P  
Sbjct: 553 VWFDSGTTHQTVLRGSHRDDSA----FPADLYLEGSDQHRGWFHSSLLTSCMMN-DAPPY 607

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K + +HG ++  +G K+SKSLGN ++P EV   +G + LR +       G+    D+  L
Sbjct: 608 KALLTHGMVVDGQGRKMSKSLGNGVEPQEVANRLGAEILRLWTASSDYSGEISVSDEI-L 666

Query: 347 KKRVNA 352
           K+ V A
Sbjct: 667 KRVVEA 672


>gi|32471355|ref|NP_864348.1| valyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32443196|emb|CAD72027.1| valyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 1040

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKS 306
           AKF+P    +  +DIL      W A ++   L     +P  +VF H  IL   GE +SKS
Sbjct: 570 AKFYPTATLITSRDILTL----WVARMVLMGLNNVGEVPFSEVFIHPKILDGLGETMSKS 625

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVR 331
            GN +DPI+VI++ G DALR+ L R
Sbjct: 626 KGNGVDPIDVIDKFGPDALRFGLAR 650


>gi|323488399|ref|ZP_08093646.1| leucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323397906|gb|EGA90705.1| leucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 803

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R  R+ G +VL   G D  G    + A
Sbjct: 30  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRVKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 90  LDTGNDPAEFTAKNIETFKRQIQELGFSYDWDREISTTDPSYYKWTQWIFIQLYKKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ +    DG+     H PV+      +  R++ Y D+LL
Sbjct: 150 VDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMRQWVLRITNYADRLL 202



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 10/84 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHKG-EKIS 304
           ++ P D+++ G +    H +Y   W   L     +S   P  +K+F+ G IL +G EK+S
Sbjct: 520 RWLPVDVYIGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPF-QKLFNQGMILGEGNEKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNV++P ++IE  G D LR +
Sbjct: 579 KSKGNVVNPDQIIESHGADTLRMY 602


>gi|318060755|ref|ZP_07979478.1| leucyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318078325|ref|ZP_07985657.1| leucyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 966

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+    H+GH    I  DV AR+ R+ G +VL T G D  G    + A
Sbjct: 63  RPKKYVMDMFPYPSGSGLHVGHPLGYIATDVFARYQRMTGHNVLHTLGFDAFGLPAEQYA 122

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++  + N  N R     L + +D
Sbjct: 123 VQTGTHPRISTEANMANMRQQLRRLGLGHD 152


>gi|312143927|ref|YP_003995373.1| isoleucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904578|gb|ADQ15019.1| isoleucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 931

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       DN        WPA +++ G D  R  F++    A       
Sbjct: 532 IMDVWFDSGSSHKAVLETRDNLS------WPAQIYLEGTDQYRGWFNSSLLTAVATEGRA 585

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P   +V ++GF +  KG K+SKS GNV+ P +VI++ G D LR ++ 
Sbjct: 586 PY-NEVITNGFTVDDKGIKMSKSQGNVVSPHKVIDQYGADILRLWVA 631



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 24/55 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +E   +     Y N   HIGHA   I+ D + RF  L G    +  G D HG  I
Sbjct: 47  KESFILHDGPPYANGDIHIGHALNKILKDFVTRFATLKGYYSPYVPGWDTHGLPI 101


>gi|209542815|ref|YP_002275044.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530492|gb|ACI50429.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 871

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 40/90 (44%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 37  DRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRARGHSVLHPMGWDAFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           +  GV  + +   N    R     L  S++
Sbjct: 97  RERGVHPQAWTLDNIAAMRATLKRLGFSFN 126


>gi|157736772|ref|YP_001489455.1| isoleucyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980052|sp|A8ES62|SYI_ARCB4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157698626|gb|ABV66786.1| isoleucyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 919

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 11/116 (9%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW D+ +   T    L + +     F PAD+++ G D  R  F +   
Sbjct: 528 PDDLEKTLDILDVWFDSGS---TQNAVLRSRNYDAGTF-PADMYLEGSDQHRGWFQSSLL 583

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              L S+ +   K + +HGF +  KGEK+SKS GNV+ P +VI+E G + LR ++ 
Sbjct: 584 TT-LASSEIAPYKSILTHGFTVDEKGEKMSKSKGNVVAPDKVIKEYGSEILRLWVA 638



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ D++ +FH  +G  + +  G D HG  I +  +
Sbjct: 58  YANGNIHIGHALNKILKDIINKFHYFEGKSIRYVPGWDCHGLPIEQKVE 106


>gi|66816517|ref|XP_642268.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997204|sp|Q54YD4|SYIC_DICDI RecName: Full=Probable isoleucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Isoleucine--tRNA ligase; Short=IRS;
           Short=IleRS
 gi|60470339|gb|EAL68319.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1067

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 42/384 (10%)

Query: 114 SDKGDIYKGCYSGWY----SLRDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEGY 165
           SD   IYK   S W+    S+RD+   N+D+ Y   D     ++ N   N   W      
Sbjct: 407 SDTPLIYKAVGS-WFVRVESIRDKLLANNDKTYWVPDFVKEKRFANWLKNATDWAVSRNR 465

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP- 224
           +     +   +  +     E ++ I   +E+     SG++   L R++ D  I IP    
Sbjct: 466 Y-----WGTPIPLWISEDGEEVVVIGSIDELERL--SGVRVTDLHRESID-HITIPSQKG 517

Query: 225 -------QYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
                  + +   W ++ +       Y  +N D  + K +PA  H I + + +    ++ 
Sbjct: 518 KGTLRRIEDVFDCWFESGSMPYAQQHYPFENKDKFE-KIFPA--HFIAEGLDQTRGWFYT 574

Query: 277 AFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             +LS  L   P  + +  +G +L   G+K+SK L N  DP+EV+ +VG D+LR +L+  
Sbjct: 575 LLVLSTALFDKPPFQNLIVNGLVLAADGKKMSKRLKNYPDPMEVVSKVGADSLRLYLINS 634

Query: 333 IACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-- 386
                +   + + G++   K V     N     V   +           P       S  
Sbjct: 635 PVVRAETLKFQEKGVQDMIKDVFLPWFNAYRFFVQNCLRFEKATNTTFQPDIKVALASEN 694

Query: 387 --DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR- 443
             D+ IL+ C  ++  +R  M    ++  + +++  + ++  +F       LK +N D  
Sbjct: 695 VMDKWILASCQSLIAFVRAEMAAYRLYTVVPKLVRFIEDLTNWFVRLNRKRLKGSNGDAD 754

Query: 444 ASTVLYVTVEVIRQLAILLQAFVP 467
               L +  EV+  + I +  F P
Sbjct: 755 CLAALNILYEVLMTICIAMGPFTP 778


>gi|288553838|ref|YP_003425773.1| leucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544998|gb|ADC48881.1| leucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 807

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      +P+ A  H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPFPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR     L  SY  D  + T +  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTLKNIDTFRRQIKSLGFSYDWDREVNTIDPDYYKWTQWIFLKLYEKGLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG+     H PV+    + +  +++AY D+LL
Sbjct: 149 YIDEVAVNWCPALGTVLANEEVI----DGKSERGGH-PVERRPMKQWMLKITAYADRLL 202



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HK 299
           D  K K W P D+++ G +    H +Y   W  FL    +   K    K+++ G IL   
Sbjct: 515 DPEKLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLYNQGMILGEN 574

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNV++P +++   G D LR +
Sbjct: 575 NEKMSKSKGNVVNPDDIVLSHGADTLRLY 603


>gi|261886091|ref|ZP_06010130.1| valyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 664

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 21/137 (15%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---------AKFWPADLHVIGKDI 267
           G K   DP  ++  W  +    ++T G+  N D  K         ++F+P  + + G DI
Sbjct: 443 GNKFTQDPD-VLDTWFSSGLWPISTLGW-GNADELKNEKWFERDLSEFYPNTMLITGFDI 500

Query: 268 LRFHAIYWPAFLL----SANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321
           L F    W A ++    +A   LP K ++ H  + +K G+K+SKS GNVIDP+  I+E  
Sbjct: 501 LFF----WVARMMFQCGNAVGELPFKDIYLHALVKNKDGKKMSKSSGNVIDPLTKIDEYS 556

Query: 322 VDALRYFLVREIACGKD 338
            D LR+ L      G+D
Sbjct: 557 ADILRFTLTLLCVQGRD 573


>gi|241859197|ref|XP_002416187.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215510401|gb|EEC19854.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 755

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           +K+Y+ +   YP+ Q H+GH     I+D  AR +++ G  V+   G D  G     AA  
Sbjct: 4   KKMYVLSMFPYPSGQLHLGHVRVYTISDTYARLYKMLGKHVIHPMGWDSFGLPAENAAVE 63

Query: 63  --QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             ++    T+  +D   +  +DM    +  ++  I T +  ++   + L+ K+ +KG +Y
Sbjct: 64  RNEDPRNWTEKNIDSMKKQLKDMN--FNFDWEREISTCDPNYYKWTQYLFLKLYEKGLVY 121

Query: 121 K 121
           +
Sbjct: 122 R 122


>gi|307155055|ref|YP_003890439.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306985283|gb|ADN17164.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 854

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  KTKPKYYALSMFPYPSGNLHMGHVRNYVITDVIARLKRMQGHRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G+    +  QN    +     L +S D
Sbjct: 90  AIERGIHPAKWTYQNIAQMKQQLQQLGLSID 120


>gi|152991025|ref|YP_001356747.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166229752|sp|A6Q4I1|SYI_NITSB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151422886|dbj|BAF70390.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 918

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +           G+    +PADL++ G D  R  F +    +  +    
Sbjct: 532 ILDVWFDSGSTWYAVLKSRRYDAGN----YPADLYLEGSDQHRGWFQSSLLVSGAIEKRA 587

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + +HGF +  KGEK+SKS GNV+ P++V ++ GV+ LR ++ 
Sbjct: 588 PF-KAILTHGFTVDEKGEKMSKSKGNVVAPMDVAKKYGVEILRLWVA 633



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           Y N   HIGHA   I+ D++ +F+  +G  V FT G D HG  I +  +    T K
Sbjct: 58  YANGHIHIGHALNKILKDIIVKFNYFEGKAVRFTPGWDCHGLPIEQQVEKKLGTAK 113


>gi|90108433|sp|Q7UXH9|SYV_RHOBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 1035

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKS 306
           AKF+P    +  +DIL      W A ++   L     +P  +VF H  IL   GE +SKS
Sbjct: 565 AKFYPTATLITSRDILTL----WVARMVLMGLNNVGEVPFSEVFIHPKILDGLGETMSKS 620

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVR 331
            GN +DPI+VI++ G DALR+ L R
Sbjct: 621 KGNGVDPIDVIDKFGPDALRFGLAR 645


>gi|327537640|gb|EGF24352.1| valyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 1035

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKS 306
           AKF+P    +  +DIL      W A ++   L     +P  +VF H  IL   GE +SKS
Sbjct: 565 AKFYPTATLITSRDILTL----WVARMVLMGLNNVGEVPFSEVFIHPKILDGLGETMSKS 620

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVR 331
            GN +DPI+VI++ G DALR+ L R
Sbjct: 621 KGNGVDPIDVIDKFGPDALRFGLAR 645


>gi|315224878|ref|ZP_07866698.1| isoleucine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945153|gb|EFS97182.1| isoleucine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 1135

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 256 WPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           +PAD    G D  R      HAI    F    N    K V S+G +L K G+K+SK LGN
Sbjct: 635 YPADFIAEGVDQTRGWFYTLHAIATSVF----NSVAYKNVVSNGLVLDKNGQKMSKRLGN 690

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            +DP   I E G DA R++++       +  +D +G+
Sbjct: 691 AVDPFTTIAEYGADATRWYMISNANPWDNLKFDLEGV 727


>gi|94967163|ref|YP_589211.1| valyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94549213|gb|ABF39137.1| valyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 929

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 65/325 (20%)

Query: 205 KDLSLSRKTFD-----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWP 257
           K+++++R T +      G K+  D   ++  W  +     TT G+   P+ ++    F+P
Sbjct: 434 KEVTVARTTPEECSKCGGTKLDQDND-VLDTWFSSGMLPFTTLGW---PEKTRDLEVFYP 489

Query: 258 ADLHVIGKDILRFHAIYWPA--------FLLSANLP--------------LP-KKVFSHG 294
             L +   DIL     +W A        F+   N P              +P K+V+ H 
Sbjct: 490 TSLLLTAFDIL----FFWVARMIMMGCYFMSGPNRPTEIAGGKENELKESIPFKEVYIHS 545

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +   + +K+SK+ GNV+DPI+V+ + G DA+R+ L    A G D  + +   +      
Sbjct: 546 LVRDAERQKMSKTKGNVVDPIDVLNKFGTDAVRFTLASMAAPGTDIAFSES--RTESYRS 603

Query: 354 LANGIGNL-------VSRSVS---MILKDYDGMIPT----PGAFTES--DESILSVCSRV 397
            AN I N        V R+       L+++    P     PG  TE+  D  ILS  ++V
Sbjct: 604 FANKIWNAARFIFMNVDRAAEKGVWSLEEFAKTQPKGEGLPGFSTETLEDRWILSRFNKV 663

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAST--VLYVTVE 453
            +E+ E ++    H A   V         D Y +  KP    +   D A+        + 
Sbjct: 664 AREVSEALETYRFHEASHVVYHFFWGEFCDWYIELTKP----RLEADEATARKTFANLLA 719

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
           V      LL  F+P +  +I+  ++
Sbjct: 720 VFEGALRLLSPFMPFITEEIWHAIY 744


>gi|319779679|ref|YP_004130592.1| Valyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109703|gb|ADU92449.1| Valyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 957

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 18/195 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     TT G+ +  D  K K+ P+++ V G DI+ F    W A ++  ++ L
Sbjct: 480 VLDTWFSSALVPFTTMGWPEETDDYK-KYLPSNVLVTGFDIIFF----WVARMIMMSMHL 534

Query: 287 P-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K V+ HG IL   G+K+SKS GN I+P ++I+ V ++     LV +   G    
Sbjct: 535 TGQIPFKVVYVHGLILDAHGQKMSKSKGNTINPEDLIDGVDLET----LVNKRTQGLMNP 590

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                ++K    D  NGI    + ++   +  Y  +        +  E   + C+++   
Sbjct: 591 KQASKIEKETRKDYPNGINAYGTDALRFTMATYATLGRNMNFDLKRCEGYRNFCNKLWNA 650

Query: 401 IR---ENMQNQLIHR 412
            R    N++++ IH+
Sbjct: 651 SRFVLMNVEDKPIHK 665



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 33/131 (25%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   I D L R++R++G D ++  G+D           +AG+ T++ V++     
Sbjct: 65  HMGHAFNQTIMDGLVRYYRMNGSDTVYIPGSD-----------HAGIATQIVVERQ---- 109

Query: 81  RDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYK-----GCYSGWYSLRDEA 134
               D   +S  D  R    +R  D     WK IS  G I+K     G  + W     E 
Sbjct: 110 ---LDAEGVSRHDLGREKFLERVWD-----WKNISG-GTIHKQIRKLGSSADWSR---EY 157

Query: 135 YYNDDEVYKGA 145
           +  DD++ KG 
Sbjct: 158 FTMDDQMSKGV 168


>gi|312375470|gb|EFR22840.1| hypothetical protein AND_14142 [Anopheles darlingi]
          Length = 720

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 13/107 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     +TTG+ ++   ++ ++ P DL   G DIL     +W A +      L
Sbjct: 481 VLDTWFSSALLPFSTTGWPNSVTPNQQEY-PLDLMETGHDIL----FFWVARMVMLGQEL 535

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           +  LP  +K+  HG I   +G K+SKSLGNVI P  V+  + ++ L+
Sbjct: 536 TGTLPF-RKILLHGIICDEQGRKMSKSLGNVIKPEHVVNGITLEGLQ 581


>gi|254417260|ref|ZP_05031004.1| leucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196175913|gb|EDX70933.1| leucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 855

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 39/90 (43%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARKSRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              GV    +  QN    +     L +SYD
Sbjct: 91  IQRGVHPAKWTYQNITQMQSELKRLGLSYD 120


>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 921

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSH---QGVL----VERGMKYPADLYLEGSDQHRGWFNSSLITSVAINGLA 574

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF+L  +G K+SKSLGNVI P +V+++ G D LR ++
Sbjct: 575 PY-KGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMDQYGADILRLWV 619



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   ++ D++ R   + G  V +  G D HG  I +A  N GV  K   +
Sbjct: 58  YANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIEQALTNKGVKRK---E 114

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRILWK------------KISDKG 117
            +   FR +      + +D   + F R   + + +   I  K            K+++KG
Sbjct: 115 MSVAAFRQLCEEYAYEQIDNQRNQFRRLGIRGNWENPYITLKPEFEARQIEVFGKMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 YIYKGLKPVYWSPSSESALAEAEI 198


>gi|88604156|ref|YP_504334.1| leucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189618|gb|ABD42615.1| leucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 924

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 29/236 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K Y++ A  YP+   H+GH    I+ DV+ARF R+ G +VL+       G  +   +
Sbjct: 26  EKKKFYLTVAYPYPSGAMHVGHGRTYIVPDVVARFWRMRGREVLYPMAFHVTGAPVIGIS 85

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK-----ISDKG 117
           +      +  +      +R   DVL+ ++ D +       ++  R++ +       S + 
Sbjct: 86  KRIARRDESAIKLYRDLYRVPEDVLE-TFTDPLNIVNHFSNEYERVMTQAGLSIDWSRRF 144

Query: 118 DIYKGCYSG-----WYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPV--------QWMEEE 163
              +  YS      WY LR+  + N     KGA    Y  Q  NPV           E +
Sbjct: 145 TTVEPTYSKFIEWQWYHLREAGHVN-----KGAHPVRYCPQCENPVGDHDLLEGDKAEIQ 199

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFVKSGL--KDLSLSRKTFD 215
            +   +  Y D  +      PE I  +     N  + +V++ +  K+  LSR+  +
Sbjct: 200 KFTLIMFQYGDAFIPCATLRPETIYGVTNLWVNPTVEYVRARVDGKEWILSRQAME 255



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 70/182 (38%), Gaps = 43/182 (23%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA------------ 234
           ++P E R E    V   LKD + SR+    G K+P DP++++    D+            
Sbjct: 457 LVPQEVRAEFFRTV-DWLKDWACSRR-IGLGTKMPWDPEWLIEPLSDSTIYMAYYTIASR 514

Query: 235 ---LTNYLTTTGYLD---------------NPDGSKAKF---WPADLHVIGKDILRFHAI 273
              +   L T    D                 DG + +F   +P D     KD++  H  
Sbjct: 515 IKHIDPALLTPAVFDYIFLGKESEGLPERERLDGMRKEFLYWYPYDFRFSAKDLISNHLT 574

Query: 274 YWPAFLLSANLPLPKKVFSHGFI-----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           +    L       PK+   HG +     L  G K+S S GNV    + I + G D +R F
Sbjct: 575 FQ---LFHHCTIFPKECLPHGMVVFGMGLLNGAKMSSSKGNVYLLEDAINDFGADTVRMF 631

Query: 329 LV 330
           L+
Sbjct: 632 LI 633


>gi|49475069|ref|YP_033110.1| isoleucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81648251|sp|Q6G4S5|SYI_BARHE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49237874|emb|CAF27070.1| Isoleucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 971

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 24/157 (15%)

Query: 187 ILPIERRNEVI----------SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           IL  ER NE I          ++   G ++  L  +  +  I++ D    I+ VW D+  
Sbjct: 526 ILKDERVNERILRAFEAEGADAWFAEGARERFLGERAHESWIQVVD----ILDVWFDSGA 581

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHG 294
           ++   +  L++ D      WPAD++  G D  R  F +    +    A  P  K V +HG
Sbjct: 582 SH---SFVLEDRDDLN---WPADVYFEGSDQHRGWFQSSLLESCGTRACSPY-KAVITHG 634

Query: 295 FIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           F L   G+K+SKSLGN + P E+I+  G D  R +++
Sbjct: 635 FTLDENGKKMSKSLGNTVVPQEIIKTFGADIFRLWVM 671



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+R    +     Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 52  KDRPLYTLHDGPPYANGHIHIGHALNKVLKDVIIRSFQMRGFNANYVPGWDCHGLPI 108


>gi|315029692|gb|EFT41624.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
          Length = 933

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLYV 450
           +V+Q+IREN   +     I+R +   ++ V     Y D A+    ++  N  +   +  V
Sbjct: 692 QVIQQIRENGYEKYNFMHIYRTVMNFLT-VDLSSFYLDFAKDVVYIEAENDYQRRCMQTV 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + +  L  LL   +P  A +I+  L   +E
Sbjct: 751 FYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|299772089|ref|YP_003734115.1| isoleucyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298702177|gb|ADI92742.1| isoleucyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 945

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +   G K+SKSLGN I  
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY-KALLTHGFTVDENGRKLSKSLGNYIPL 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            E+I+++G D LR ++       EIA  K+ F       +R+              ++  
Sbjct: 626 EEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIR------------NTLRF 673

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + +G  P+  A    D  ++++   +LQ   E  Q 
Sbjct: 674 LLANLNGFKPSTDALAVDD--LIALDQYILQRANEVQQT 710



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ DV+ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDVIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR +     +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKLCREYALKQIDLQRTDFKR 152


>gi|297571565|ref|YP_003697339.1| leucyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931912|gb|ADH92720.1| leucyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 959

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E  ++     YP+ +  H+GH    I  D LAR+ R+ G +VL+T G D  G    + A 
Sbjct: 51  EAYFLLDMFPYPSGKGLHVGHPLGFIATDCLARYQRMQGKNVLYTMGFDAFGLPAEQYAV 110

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   ++  +QN  N R     L +S++
Sbjct: 111 QTGQHPRITTEQNIDNMRGQLRRLGMSHE 139


>gi|294012277|ref|YP_003545737.1| isoleucyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292675607|dbj|BAI97125.1| isoleucyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 1010

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 14/109 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           I+ VW D+ + +         PD        ADL++ G D    H  ++ + LL ++   
Sbjct: 623 ILDVWFDSGSTHSFVVEGRYGPDAR------ADLYLEGSDQ---HRGWFQSSLLESSGTR 673

Query: 287 PKK----VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +     V +HGF L  +G K+SKSLGNV+DP++VI E G D LR ++ 
Sbjct: 674 GRAPYGAVLTHGFALDGQGRKMSKSLGNVVDPLKVIAESGSDILRVWVA 722



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K RE+  +     Y N   H+GHA   ++ D++ R   L G D  +  G D HG  I
Sbjct: 49  KGRERFILHDGPPYANGDIHMGHAMNKVLKDIIVRSQSLLGKDAPYVPGWDCHGLPI 105


>gi|282851118|ref|ZP_06260492.1| leucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282558070|gb|EFB63658.1| leucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 804

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R    +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIISRMKRAQAYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|301754011|ref|XP_002912800.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281343577|gb|EFB19161.1| hypothetical protein PANDA_000601 [Ailuropoda melanoleuca]
          Length = 903

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +A F ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIAWFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N  + R   D L +  S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIEHMRRQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YK 121
           Y+
Sbjct: 199 YQ 200


>gi|238852506|ref|ZP_04642918.1| leucine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834853|gb|EEQ27078.1| leucine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 804

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 43.5 bits (101), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIISRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|197287274|ref|YP_002153146.1| valyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|194684761|emb|CAR46786.1| valyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 962

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +N +  K  F P ++ V G DI+ F    W A ++   +  
Sbjct: 483 VLDTWFSSALWTFSTLGWPENTEALKT-FHPTNVLVSGFDIIFF----WIARMIMMTMHF 537

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I   +G+K+SKS GNV+DP+++I+ +              
Sbjct: 538 IKDDEGKPQVPFKTVYMTGLIRDEEGQKMSKSKGNVLDPLDMIDGITLDKLLEKRTGNMM 597

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 598 QPQMAERIAKRTKKEFPEGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 655

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +D D G       F+ +D  IL+  +  ++  RE + N     A   
Sbjct: 656 LWN-ASRFVLMNTEDQDCGYQGGEMTFSLADRWILAEFNNTIKAYREALDNYRFDIAAGI 714

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 715 LYEFTWNQFCDWYLELSKP-AVHKGNDAQKRAARHTLIEVLEGLLRLAHPIIPFITETIW 773



 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+  GTD           +AG+ T++ V++
Sbjct: 60  HMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTD-----------HAGIATQMVVER 103


>gi|146308545|ref|YP_001189010.1| valyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145576746|gb|ABP86278.1| valyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 943

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 45/203 (22%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W+ ++ ++       +K ++  ES     +P +  N   S+++  ++D  +SR+ + WG 
Sbjct: 374 WLTDQ-WYVSTKPLAEKAIAVVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQLW-WGH 430

Query: 219 KIP-------------DDPQY----------------IMYVWIDALTNYLTTTGYLDNPD 249
           +IP             D+ +                 ++  W  +     +T G+ +  D
Sbjct: 431 RIPAWYDEAGNVYVGRDEAEVRAKHNLEGVALRQDEDVLDTWFSSGLWTFSTLGWPEQTD 490

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGEK 302
             K  F P D+ V G DI+     +W A +      L+  +P  K V+ HG +   +G+K
Sbjct: 491 FLKT-FHPTDVLVTGFDII----FFWVARMIMLSTHLTGQIPF-KTVYVHGLVRDGQGQK 544

Query: 303 ISKSLGNVIDPIEVIEEVGVDAL 325
           +SKS GNV+DP+++++ + +D L
Sbjct: 545 MSKSKGNVLDPLDIVDGITLDEL 567



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAK---AAQNAG-------- 66
           H+GH +   I D L RF R+ G + L+  GTD  G   Q + +   AAQ  G        
Sbjct: 47  HMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMVVERQLAAQGIGRHDLGREK 106

Query: 67  VTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              KV+  +N      +R  R +   +D S + F  T +    +  +  + ++ + G IY
Sbjct: 107 FLEKVWEWKNQSGGTITRQIRRLGSSVDWSRERF--TMDDGLSEAVKEAFVRLHEDGLIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166


>gi|113869000|ref|YP_727489.1| isoleucyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|122946626|sp|Q0K7A0|SYI_RALEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113527776|emb|CAJ94121.1| Isoleucyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 964

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 29/265 (10%)

Query: 230 VWIDALTNYLTTTGY-----LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           VW D+ T + +         L +P   +A    ADL++ G D  R  FH+    A +L  
Sbjct: 558 VWFDSGTTHWSVIRGSHRDDLYDPSADEADGRLADLYLEGSDQHRGWFHSSLLTASMLYG 617

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K + +HGF +  +G K+SKS+GN + P ++  ++G + +R ++      G+    
Sbjct: 618 KPPY-KALLTHGFTVDGEGRKMSKSIGNTVSPQDISNKMGAEIIRLWVASTDYSGELSIS 676

Query: 342 DKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
           D+  LK+ V     + N +  L+S      L DYD     +P    + E D   +++ ++
Sbjct: 677 DEI-LKRVVEGYRRIRNTLRFLLSN-----LSDYDHARHALPA-SEWLEIDRYAVALTAQ 729

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR-----ASTVLY 449
           + +E+  + +    H  ++++ +  SE     Y D  K   L  T PD      A   LY
Sbjct: 730 LQKEVLSHYEAYEFHPVVSKLQTFCSEDLGGFYLDVLKD-RLYTTAPDSKARRAAQNALY 788

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
              + +        +F  + A +IF
Sbjct: 789 HITQAMLHWMAPFLSFTAEEAWQIF 813



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K  +K  +     Y N   HIGHA   ++ D++ +   L GLD ++  G D HG  I
Sbjct: 54  KGAKKFVLHDGPPYANGDIHIGHAVNKVLKDMIIKARGLTGLDAVYVPGWDCHGMPI 110


>gi|295106213|emb|CBL03756.1| leucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 857

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 22/187 (11%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GE +SKS GNVI P ++I E G DA+R +++      KD  +D+ GL          GI 
Sbjct: 603 GETMSKSKGNVIAPEDMIAEYGADAVRAYILFMAPPDKDLLWDEGGLA---------GIY 653

Query: 360 NLVSRS----VSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIH 411
             ++R+      ++ +  D  +  PGA      E+ ++++    RV  ++ ++      +
Sbjct: 654 KFMNRAWRIVCDLVGQAGDETLYQPGASEAEGVEALKTLVRERHRVAGKVVDDFDRNNFN 713

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L +    Y     P E       RA     +  EV   +  L+    P  A 
Sbjct: 714 TAIAAIMELCNAAADYLRKCSPEERAACEGSRA-----IDPEVAEVIVKLMAPIAPHWAE 768

Query: 472 KIFDILF 478
           +++  + 
Sbjct: 769 ELWSAVL 775



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          + K Y+     YP+   H+GH     I DV+AR+ ++ G DVL   G D  G     AA
Sbjct: 31 KPKRYVLEMFPYPSGDIHMGHVRNYTIGDVIARYSKMRGFDVLHPMGWDAFGLPAENAA 89


>gi|239616581|ref|YP_002939903.1| leucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505412|gb|ACR78899.1| leucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 791

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 11/95 (11%)

Query: 246 DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVF-SHGF 295
           D P D   AK W P D+++ G +    H +Y   F+  A       +   P K F  HG 
Sbjct: 506 DRPFDPELAKKWLPVDMYIGGNEHANLHLMY-ARFITMALHDLGILHFEEPFKSFRGHGL 564

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I+  GEK+SKS GN+++P +  +  GVDALR +L+
Sbjct: 565 IIKDGEKMSKSKGNIVNPNDYFDTHGVDALRTYLM 599



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 12/184 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  Y      YP+A   HIG+ Y  I +DV  R+ +L G DV    G D  G      A
Sbjct: 29  KKPFYNLMMFPYPSASGLHIGNMYSFIGSDVYGRYKKLQGYDVFEPIGFDAFGIHSENYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRD-----MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
              G        ++ + FRD     + ++ D S +  + T+   ++   + ++ ++   G
Sbjct: 89  LKVGEHPAKLTPKSIKYFRDEQLKKIGNIYDWSSE--VNTSSPEYYKWTQWIFLQLYKAG 146

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              K      +    +    D++V    DG+        +   E   +FF+++ Y D+LL
Sbjct: 147 LAEKKNSEVNWCPSCKTVLADEQV---IDGKCERCS-TEITKREMSQWFFKITKYADRLL 202

Query: 178 SYYE 181
              E
Sbjct: 203 ENLE 206


>gi|94263446|ref|ZP_01287259.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456176|gb|EAT06315.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 898

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +     K  F+P  + +   DIL     +W A ++   L  
Sbjct: 451 VLDTWFSSALWPFSTLGWPEQTRELKM-FYPTSVLITSFDIL----FFWVARMMMMGLHF 505

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              +P + V+ H  +  K G+K+SKS GNV+DP+E+++  G DALR+ +    A G++
Sbjct: 506 MDEVPFRHVYLHALVRDKHGQKMSKSKGNVLDPLELMDRYGTDALRFTMAAFAAQGRE 563



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +K   S  I  PN     H+GHA    + D+L R+ R+ G +VL+  GTD  G     
Sbjct: 35  DEDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAG----I 90

Query: 61  AAQNAGVTTKVFVDQN 76
           A QN  V  +   DQ 
Sbjct: 91  ATQN--VVERQLADQG 104


>gi|260557771|ref|ZP_05829985.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260408944|gb|EEX02248.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 752

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +   G K+SKSLGN I  
Sbjct: 374 PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY-KALLTHGFTVDENGRKLSKSLGNYIPL 432

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            E+I+++G D LR ++       EIA  K+ F       +R+              ++  
Sbjct: 433 EEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIR------------NTLRF 480

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + +G  P+  A    D  ++++   +LQ   E  Q 
Sbjct: 481 LLANLNGFKPSTDALAVDD--LIALDQYILQRANEVQQT 517


>gi|269125826|ref|YP_003299196.1| leucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310784|gb|ACY97158.1| leucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 838

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 22/201 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y      YP+   H+GHA    I DV+AR+    G +VL   G D  G     AA 
Sbjct: 52  RERRYALDMFPYPSGDLHMGHAEAFAIGDVVARYWFQRGYNVLHPIGWDSFGLPAENAAI 111

Query: 63  ---QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              ++    T   ++  + +FR  A   D S    + T++  ++   + L+ +  ++G  
Sbjct: 112 KRNEHPAKWTYANIETQAASFRRYAPSFDWSRR--LHTSDPEYYKWTQWLFLRFYERGLA 169

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDK 175
           Y KG    W    D+    +++V  G   +   A   +    QW      +FR++ Y D+
Sbjct: 170 YRKGGQVNWCP-NDQTVLANEQVV-GGHCERCGALVERRTLTQW------YFRITEYADR 221

Query: 176 LLSYYES----HPEFILPIER 192
           LL   +      PE +L ++R
Sbjct: 222 LLEDMKQLEGKWPERVLVMQR 242


>gi|255083528|ref|XP_002504750.1| predicted protein [Micromonas sp. RCC299]
 gi|226520018|gb|ACO66008.1| predicted protein [Micromonas sp. RCC299]
          Length = 954

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 38/271 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++            S+   +PAD+++ G D  R  F +        +   P
Sbjct: 534 MDVWFDSGSSWAGVVK-------SRGLKYPADMYLEGSDQHRGWFQSSLLTGVAAAGKAP 586

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL-----V 330
             +K+ +HGF+L  KG K+SKSLGNVIDP  +IE           G D LR ++      
Sbjct: 587 Y-EKILTHGFVLDEKGYKMSKSLGNVIDPRLIIEGGKNQKTEPAFGADTLRLWVASTDYT 645

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            ++  G +         +++   L   +GN+      +    YD  +P+       D   
Sbjct: 646 SDVLIGVNILKQTSDAYRKLRGTLRFLMGNIGDFDPLLDAVPYD-QLPS------FDRYA 698

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR-YFDAQKPW---ELKKTNPDRAST 446
           L   + +L E+          +  AQ+ S  + +   Y DA K     E     P R + 
Sbjct: 699 LRRTADMLAEMDRAYATHQYSQVTAQLQSFTAFLSNVYLDASKDRLYVESPTGVPRRCAQ 758

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              V  E++ +L  ++    P +A + F  L
Sbjct: 759 T--VVNEIVTRLLCVVAPIAPHMAEEAFTAL 787


>gi|222625608|gb|EEE59740.1| hypothetical protein OsJ_12199 [Oryza sativa Japonica Group]
          Length = 1061

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 24/161 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +    LT  G+ D+    KA F+P  +   G DI+ F    W A +   
Sbjct: 576 DPD-VLDTWFSSGLFPLTVLGWPDDTADLKA-FYPGSVLETGHDIIFF----WVARMVMM 629

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L  ++P  +KV+ H  I    G K+SKSLGNVIDP++VI  + +D L   L      
Sbjct: 630 GMQLGGDVPF-EKVYLHPMIRDAHGRKMSKSLGNVIDPVDVINGISLDGLLKRL------ 682

Query: 336 GKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMILKDY 373
            K+G  D + L         D  +GI    + ++   L  Y
Sbjct: 683 -KEGNLDPNELNIATEGKKKDFPDGIAECGTDALRFALVSY 722



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 140 HIGHALTVAIEDSMIRWRRMSGYNTLWVPGVD-----------HAGIATQVVVEKKLMRE 188

Query: 81  RDMADVLDISYDDFI 95
           R++    DI  ++F+
Sbjct: 189 RNLTR-HDIGREEFV 202


>gi|229815197|ref|ZP_04445533.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
 gi|229809207|gb|EEP44973.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
          Length = 942

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 19/119 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           I+ VW D+  ++     Y   P+      +PAD+++ G D    H  ++ + LL++   N
Sbjct: 553 ILDVWWDSGVSWKAVCEY--RPELK----YPADVYLEGSDQ---HRGWFQSSLLTSVGTN 603

Query: 284 LPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIAC 335
              P K V S GF L  +G K+SKSLGNVIDP ++ +E+G D +R ++       ++AC
Sbjct: 604 GIAPYKAVISQGFTLDGQGRKMSKSLGNVIDPNKICDEMGADIIRLWVASVDTSTDVAC 662



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N   H+GHA   I  D++ R+  + G +  +  G D HGQ I    + 
Sbjct: 59  EKFVLHDGPPYANGPIHLGHAMNKIAKDMINRYKAMQGYETPYVPGWDCHGQPIEHKVET 118

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI 108
             + T+ F   ++   R++ +   +   D  R   KR                 HD   I
Sbjct: 119 Q-MGTEKFNQASTAEIRELCNKFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADI 177

Query: 109 -LWKKISDKGDIYKG 122
             +K + D+G +Y+G
Sbjct: 178 EAFKAMFDRGMVYRG 192


>gi|116629123|ref|YP_814295.1| leucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311111095|ref|ZP_07712492.1| leucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273879|sp|Q045L5|SYL_LACGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116094705|gb|ABJ59857.1| leucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311066249|gb|EFQ46589.1| leucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 804

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIISRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|329574341|gb|EGG55913.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 771

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 28/189 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L      +   +PAD+++ G D  R  F++    +  ++   
Sbjct: 529 IMDVWFDSGSSH---EGVLRE---REELTFPADMYLEGSDQYRGWFNSSITTSVAINGVA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S G +L  +G K+SKSLGN I P +VI ++G D LR + V  +    D     
Sbjct: 583 PY-KSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLW-VSSVDAEAD----- 635

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
                RV+ D+ N +  +   +  ++  +L +     P       +D    +  ++V  +
Sbjct: 636 ----VRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLN 691

Query: 396 RVLQEIREN 404
           +V+QEIREN
Sbjct: 692 QVIQEIREN 700



 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + V
Sbjct: 65  YANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTV 124

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +D   +DF R            T    ++   I ++ K+++KG IY
Sbjct: 125 AEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 185 KGLKPIYWSPSSESSLAEAEI 205


>gi|296109335|ref|YP_003616284.1| isoleucyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434149|gb|ADG13320.1| isoleucyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 1024

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 1/44 (2%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           KK   HGF L + GEK+SKSLGN+++P +V+E+ G D LR++L+
Sbjct: 572 KKCLMHGFTLDEHGEKMSKSLGNIVNPDDVVEKYGADILRFYLL 615



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNA 65
            Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I  K  Q  
Sbjct: 39  FYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGFNVLDKAGWDMHGLPIEVKVEQEF 98

Query: 66  GVTTKVFVDQ 75
           G+ +K  +++
Sbjct: 99  GIKSKKEIEK 108


>gi|254420718|ref|ZP_05034442.1| valyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186895|gb|EDX81871.1| valyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 909

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 11/110 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +  +  + +F+P    V   DI+ F    W A ++   L  
Sbjct: 476 VLDTWFSSALWPFSTMGWPEKTEDLE-RFYPTSDLVTAADIIFF----WVARMMMMGLHF 530

Query: 285 --PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              +P K+V  +G +   KG+K+SKS GNVIDP+ +I+E+G D LR+ + 
Sbjct: 531 MDEVPFKRVIINGLVRDEKGQKMSKSKGNVIDPLGIIDELGADPLRFTMA 580



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 25/135 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------QKIAK 60
           S  I  PN     HIGHA    + D+LAR+HR+ G  VL+  GTD  G       ++   
Sbjct: 37  SIVIPPPNVTGSLHIGHALNNTLQDILARYHRMKGKAVLWLPGTDHAGIATQMVVERQLA 96

Query: 61  AAQNAG---VTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           AA N G   +  + F+D+             R  R +    D S + F  T ++  +   
Sbjct: 97  AAGNVGRRDMGREAFIDKVWEWKAESGGTIVRQLRRLGASCDWSRERF--TLDEGLNAAV 154

Query: 107 RILWKKISDKGDIYK 121
           R ++ ++  +G IY+
Sbjct: 155 RKVFVQLHKEGLIYR 169


>gi|170782133|ref|YP_001710466.1| leucyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189082992|sp|B0RDA6|SYL_CLAMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169156702|emb|CAQ01862.1| leucyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 852

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 13/180 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI     YP+   H+GHA    + D +AR+ R  G +VL   G D  G     AA 
Sbjct: 41  RPRKYILDMFPYPSGDLHMGHAEAFALGDAVARYWRQQGFNVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             GV  + +   N    +       +S+D    + T++  ++   + L+ K+ +KG  Y 
Sbjct: 101 KRGVDPREWTYANIETQKQSMKRYGLSFDWERELHTSDPEYYRWNQWLFLKMHEKGLAYR 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  +  W  + D+    +++V          A   +    QW      + R++ Y D+L+
Sbjct: 161 KDSWVNWDPV-DQTVLANEQVLPDGTSDRSGAVVVKKKLTQW------YLRITDYADRLV 213


>gi|56964107|ref|YP_175838.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822091|sp|Q5WFI3|SYI_BACSK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56910350|dbj|BAD64877.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 923

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L   +      +PADL+  G D  R  F++    +  ++   
Sbjct: 523 IMDVWFDSGSSH---QGVLRERND---LVFPADLYFEGSDQYRGWFNSSLSTSVAINGVA 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V SHGF++  +G+K+SKSLGN++ P  V++++G D LR ++ 
Sbjct: 577 PY-KGVLSHGFVMDGEGKKMSKSLGNIVVPNTVMKQLGADILRLWVA 622



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   II D + R+  + G    +  G D HG  I  A     +T    VD
Sbjct: 58  YANGDIHMGHALNKIIKDFIVRYKSMSGFHAPYVPGWDTHGLPIETA-----LTKNKKVD 112

Query: 75  QNSRNFRD 82
           + S +  D
Sbjct: 113 RKSMSIAD 120


>gi|14600670|ref|NP_147189.1| isoleucyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|8928379|sp|Q9YF67|SYI_AERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5104013|dbj|BAA79329.1| isoleucyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 1064

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 25/159 (15%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQ 63
           K Y      Y +A+  HIG A+  ++ DV+ RF+R+ G +V    G D HG  I  K  Q
Sbjct: 45  KFYFLDGPPYASAKSIHIGTAWNKVVKDVVLRFYRMTGYNVWDKPGYDTHGLPIEVKIEQ 104

Query: 64  NAGV-----------------TTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRH 102
           + GV                   K FVD+N    +R F+++   +D  +++   T    +
Sbjct: 105 SLGVRVKREIEEKVGVENFIAACKRFVDENMEAMTRQFKEIGVFMD--WENPYVTYRDEY 162

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++   L KK  +KG +YKG     +  R E    D EV
Sbjct: 163 IESGWWLVKKAWEKGLLYKGYRVLHWCPRCETTLADYEV 201



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 25/284 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    ++ VW D+   +  + GY  + + +  +  P D  V G D +R  F ++   
Sbjct: 523 RVPD----VLDVWFDSGIAFYASLGYPRDRE-TWERLKPVDFIVEGHDQIRGWFFSLLRS 577

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     P  ++V  HGF L  +G ++ KSLGN +D  E+I +V  D +R+++++    
Sbjct: 578 GVIGFGETPY-RRVLVHGFALDEQGREMHKSLGNYVDFEELIAKVPRDVVRFWVLQNTVW 636

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFTES----DESI 390
            +D  +   GL   +  D  N I N+ +  S+ M L  +D    +  +  +S    D  I
Sbjct: 637 -EDLRFSWKGLDL-MRRDF-NVIWNVYAFASIYMGLDRFDPRRTSLSSVEDSLEVEDRWI 693

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRAST 446
           LS  + + +     M++  IH A   + S + E V  ++     ++ WE   T   RA+ 
Sbjct: 694 LSRLASLKRRYLTAMEDLRIHDAARALRSFIIEDVSHWYLRIIRRRVWEEVDTPSKRAA- 752

Query: 447 VLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             Y T+ +V+ +  ++    +P  A  ++  +F   E R  +S+
Sbjct: 753 --YATLYKVLWEWLLMAAPLIPYTAEYLYIKVFREAEERPEESI 794


>gi|323516108|gb|ADX90489.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 945

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 29/186 (15%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+ +G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKHLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                 +R+              ++  +L + +G  P+  A    D  ++++   +LQ  
Sbjct: 659 RVSDSYRRIR------------NTLRFLLANLNGFKPSTDALAVDD--LIALDQYILQRA 704

Query: 402 RENMQN 407
            E  Q 
Sbjct: 705 NEVQQT 710



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|297661948|ref|XP_002809485.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Pongo
           abelii]
          Length = 1012

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ +AAQN  
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGRAAQN-- 174

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 175 -LSAMEIREKARSFAKAA--IEKQKSAFIR 201



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSW---SYVLPGPDQK------ADLYLEGKDQLGGWFQSSLLTSVATRK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  VI            G D LR+++   
Sbjct: 645 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVINGGQDQSKEPPYGADVLRWWVADS 703

Query: 331 ---REIACG 336
               E+A G
Sbjct: 704 NVFTEVAIG 712


>gi|296272307|ref|YP_003654938.1| isoleucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096481|gb|ADG92431.1| isoleucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 908

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 11/116 (9%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW D+ +   T    L + +     F PAD+++ G D  R  F +   
Sbjct: 518 PDDLEKTTDILDVWFDSGS---TQNAVLRSRNYDAGTF-PADVYLEGSDQHRGWFQSSLL 573

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              L S+ +   K + +HGF +  KGEK+SKS GNVIDP +++++ G + LR ++ 
Sbjct: 574 TT-LASSEVSPYKALVTHGFTMDEKGEKMSKSKGNVIDPAKIMKQYGSEILRLWVA 628



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFV 73
           Y N   HIGHA   I+ D++ +FH  DG  + +  G D HG  I  K  +  G T K  +
Sbjct: 58  YANGHIHIGHALNKILKDMINKFHYFDGKSIRYVPGWDCHGLPIEQKVEEKIGSTKKKEL 117

Query: 74  DQNS--RNFRD-MADVLDISYDDF 94
            ++   +  RD  A  +DI  D+F
Sbjct: 118 PKSKLRQLCRDHAAKFVDIQRDEF 141


>gi|215410607|ref|ZP_03419415.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
          Length = 72

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           LYVT EV+R  A+L+Q  +P+ A KI D+L  A   R F ++  RL PG  L      +F
Sbjct: 2   LYVTCEVVRIAALLIQPVMPESAGKILDLLGQAPNQRSFAAVGVRLTPGTALPPP-TGVF 60

Query: 508 PRF 510
           PR+
Sbjct: 61  PRY 63


>gi|72390541|ref|XP_845565.1| valyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358810|gb|AAX79263.1| valyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70802100|gb|AAZ12006.1| valyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 975

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+     G   +F+P  L   G DIL F    W A ++  +L  
Sbjct: 490 VLDTWFSSAMWPFSTMGW-PAETGDMQRFFPGSLMETGHDILFF----WVARMVMTSLHF 544

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
              LP  +VF H  +  K GEK+SKS GNVIDP+ +I  V ++AL
Sbjct: 545 TGKLPFSEVFLHAMVRDKNGEKMSKSKGNVIDPLFIISGVSLEAL 589



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    + D L RFHR+ G D L+  GTD           +AG+ T+V V++  R  
Sbjct: 60  HIGHALTGAVQDALIRFHRMKGDDTLYLPGTD-----------HAGIATQVVVEK--RLM 106

Query: 81  RDMADVL-DISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           ++      D+  ++F++       + C ++ +++   G
Sbjct: 107 KESGKSRHDVGREEFLKQVWVFKENHCGVITRQLRRIG 144


>gi|77464417|ref|YP_353921.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123744224|sp|Q3IZL4|SYL_RHOS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77388835|gb|ABA80020.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 847

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 10/183 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N  + R     L +S D   +F  T +  ++   + ++  + + G +Y
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQAMFIDMMEAGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W  +      N+  +    DG+ + +   PV   E   +FFR+S Y  +LL  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSG-APVVRRELTQWFFRISDYAGELLEA 204

Query: 180 YES 182
            ++
Sbjct: 205 LDT 207



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 32/201 (15%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I + G D  R+F++ +    +D  +   G +              
Sbjct: 619 KMSKSKKNVVDPMNIIRQFGADTARWFVMSDSPPERDVEWTASGAEA------------- 665

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            S+ +  + +  D +    G     D ++    +R + E+ + ++    ++A+A++    
Sbjct: 666 ASKHLHRVWRLADEISRADGEANAEDGALDKATARAIAEVTQGVEGFAFNKAIAKLYEFT 725

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + + R        E KK                +R +A L+   VP LA +++ +L    
Sbjct: 726 NTLSRSGAGA---EAKK--------------RAMRTMAQLMSPMVPHLAEEVWAML--GG 766

Query: 482 ENRCFQSLDQRLKPGFMLHKT 502
           E    Q+   +  P  ++  T
Sbjct: 767 EGLVAQAAWPKADPALLIDDT 787


>gi|262281444|ref|ZP_06059225.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257270|gb|EEY76007.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 945

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +   G K+SKSLGN I  
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY-KALLTHGFTVDENGRKLSKSLGNYIPL 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            E+I+++G D LR ++       EIA  K+ F       +R+              ++  
Sbjct: 626 EEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIR------------NTLRF 673

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + +G  P+  A    D  ++++   +LQ   E  Q 
Sbjct: 674 LLANLNGFKPSTDALAVDD--LIALDQYILQRANEVQQT 710



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ DV+ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDVIVKSRTLSGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR 96
           +  G   KV    ++  FR +        +D+  +DF R
Sbjct: 117 EKVG---KVGEKVDAATFRKLCREYALKQIDLQRNDFKR 152


>gi|162453410|ref|YP_001615777.1| valyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161163992|emb|CAN95297.1| valS [Sorangium cellulosum 'So ce 56']
          Length = 899

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVF 291
           +LT  +++   LD   G  A+ +PADL     DI+R  A Y    A L  A++P      
Sbjct: 536 SLTPQISSHWGLDA--GRHARLFPADLRPQAHDIIRTWAFYTIAKAMLHEASVPWHHIAI 593

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KR 349
           S   +    +K+SKS GNV+ P+ +++    DA+RY+       G D  +D+  LK  KR
Sbjct: 594 SGWILDPDRKKMSKSKGNVVTPMHLLDNYSSDAVRYWSA-SARLGTDTAFDEKVLKIGKR 652

Query: 350 VNADLANGIGNLVSRSVSM 368
           +   + N    ++S+S  +
Sbjct: 653 LVTKIWNAGKYVLSQSAEV 671


>gi|153823935|ref|ZP_01976602.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518546|gb|EAZ75769.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 877

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|117927293|ref|YP_871844.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|166200127|sp|A0LQZ8|SYC_ACIC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117647756|gb|ABK51858.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 469

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 127/328 (38%), Gaps = 60/328 (18%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R  +Y+  A     A PHIGH    ++ DVL R+  + G DV+F     +   KI + A 
Sbjct: 23  RVTMYVCGATV--QAPPHIGHLRSGLVFDVLVRWLAVHGYDVVFCRNVTDIDDKILRVAA 80

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+       +N R F D A  L       +      H      L +++ D G  Y   
Sbjct: 81  AEGIPWWQVAYRNYRLF-DSAYRLLGCVPPTVEPWATGHIPQIIALIRRLIDAGHAYPAG 139

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
              ++++R          Y G  G+  +A    +Q  E +G                   
Sbjct: 140 GDVYFAVRSF------PAYGGLSGRDPDA----LQAGESDG------------------- 170

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL-TNYLTTT 242
                 + +R+ +   +  G K    S ++  WG   P  P +  ++   A+ T YL +T
Sbjct: 171 ------VHKRDPLDFALWKGAKPGEPSWES-PWG---PGRPGW--HIECSAMSTTYLGST 218

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                           D+H  G D+L  H     A   +A     +    +G +  +GEK
Sbjct: 219 ---------------FDIHGGGLDLLFPHHENECAQSQAAGDGFARYWLHNGLVTLRGEK 263

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKSLGNV+   +++E V    LRY+L+
Sbjct: 264 MSKSLGNVLSMDQLLELVRPIELRYYLI 291


>gi|168025691|ref|XP_001765367.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683420|gb|EDQ69830.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 906

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D++AR+ R+ G +VL   G D  G    + A
Sbjct: 59  KPKYYVLDMFPYPSGAGLHVGHPEGYTATDIMARYKRMRGFNVLHPMGWDAFGLPAEQYA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +    +N   FR     L  SYD    I TTE  ++   + ++ ++  +G  Y
Sbjct: 119 IQTGTHPRETTLKNIDRFRSQLKSLGFSYDWQREISTTEPDYYKWTQWIFLQLFKRGLAY 178

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   +  W         N++ +    DG      H PV       +  +++ Y D+L+
Sbjct: 179 EAEVAVNWCPALGTVLSNEEVI----DGLSERGSH-PVIRKPMRQWMLKITQYADRLV 231



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/186 (18%), Positives = 77/186 (41%), Gaps = 39/186 (20%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  +  K+SKS GNVI+P +++ E G D+LR + +          +  +G++        
Sbjct: 666 VSSRAHKMSKSRGNVINPDDIVSEYGADSLRLYEMFMGPLRDVKIWSTNGVE-------- 717

Query: 356 NGIGNLVSRSVSMILKDY-------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            G+   + R+  +++          +  + T GA ++     L  C   + ++ E + N 
Sbjct: 718 -GVHRFLGRAWRLVVGSALPGGGYPEHTLATDGAPSKEQLRALHQC---ISKVTEEIDNM 773

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A ++  ++  +++ D  K                    EV+    +LL    P 
Sbjct: 774 RFNTAIAAMMEFINVANKWTDRPK--------------------EVLEPFVLLLSPLAPH 813

Query: 469 LANKIF 474
           +A +++
Sbjct: 814 IAEELW 819


>gi|148272728|ref|YP_001222289.1| leucyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|189082991|sp|A5CR89|SYL_CLAM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147830658|emb|CAN01594.1| leuS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 851

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 13/180 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI     YP+   H+GHA    + D +AR+ R  G +VL   G D  G     AA 
Sbjct: 41  RPRKYILDMFPYPSGDLHMGHAEAFALGDAVARYWRQQGFNVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
             GV  + +   N    +       +S+D    + T++  ++   + L+ K+ +KG  Y 
Sbjct: 101 KRGVDPREWTYANIETQKQSMKRYGLSFDWERELHTSDPEYYRWNQWLFLKMHEKGLAYR 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA---QHNPVQWMEEEGYFFRLSAYQDKLL 177
           K  +  W  + D+    +++V          A   +    QW      + R++ Y D+L+
Sbjct: 161 KDSWVNWDPV-DQTVLANEQVLPDGTSDRSGAVVVKKKLTQW------YLRITDYADRLV 213


>gi|86608501|ref|YP_477263.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557043|gb|ABD02000.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 942

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 32/202 (15%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++            ++   +P DL++ G D  R  F +    +  ++ + P
Sbjct: 537 MDVWFDSGSSWAAVAK-------AQGLGYPVDLYLEGSDQHRGWFQSSLLTSVAVNGHAP 589

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K V +HGF+L  KG+K+SKSLGNVIDP+ +I            G D LR + V  +  
Sbjct: 590 Y-KAVLTHGFVLDEKGQKMSKSLGNVIDPLVLINGGKDPQTDPAYGADVLRLW-VSSVDY 647

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESI 390
             D    K  L +   AD+   I N  +R +   L D++   PT       A TE D  I
Sbjct: 648 SGDVPLGKTILGQM--ADVYRKIRN-TARFLLSNLYDFN---PTQDAVPFAALTELDRYI 701

Query: 391 LSVCSRVLQEIRENMQNQLIHR 412
           L     V  EI E+  +   +R
Sbjct: 702 LHRLHEVGSEIGESFASYQFYR 723


>gi|147675239|ref|YP_001216177.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262169981|ref|ZP_06037671.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|172047695|sp|A5F8Z3|SYI_VIBC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146317122|gb|ABQ21661.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012507|gb|ACP08717.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262021715|gb|EEY40426.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 949

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  + +  P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKSKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|121730028|ref|ZP_01682440.1| isoleucyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628232|gb|EAX60751.1| isoleucyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 949

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  + +  P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKSKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|254500225|ref|ZP_05112376.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222436296|gb|EEE42975.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 979

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSL 307
           +++  D+ + G DI+ F    W A ++   +   K+V  H   ++       G+K+SKSL
Sbjct: 572 RYYKTDVLITGFDIIFF----WVARMMMQGIHFMKEVPFHTVYINSIVVDKNGKKMSKSL 627

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           GNV+DP+E+I   G DA RY L  +   G+
Sbjct: 628 GNVLDPLEMIASYGADATRYALASQEVQGR 657



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 16/69 (23%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ----- 75
           H+GHA    + D+L R+ R+ G DVL+  GTD           +AG+ T++ V++     
Sbjct: 55  HMGHALNNTLQDILVRWKRMQGYDVLWQPGTD-----------HAGIATQMVVERELAAD 103

Query: 76  NSRNFRDMA 84
           N    RDM 
Sbjct: 104 NKPGRRDMG 112


>gi|219684920|ref|ZP_03539861.1| isoleucyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671658|gb|EED28714.1| isoleucyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 985

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 12/241 (4%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
            +N    K  F PAD    G D  R  F+ +      L  N    K V  +G +L   G 
Sbjct: 536 FENESNFKNTF-PADFIAEGLDQTRGWFYTLTILGTSLFENTAF-KNVIVNGLVLSSDGR 593

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N  DP+EVI   G DALR +L+       D     D   + V  ++   I N 
Sbjct: 594 KMSKSFKNYTDPMEVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNA 653

Query: 362 VSRSVSMILKDYDGMIPTPG-AFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            S   +  +   D   P    +  +S   D+ I+S    + + + + +    + +++  +
Sbjct: 654 YSFFTTYAI--IDKFKPAKNLSLVKSNNLDKWIISELESLKKILNKEIDKYNLTKSIESL 711

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDI 476
           +  + +++ ++  +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  
Sbjct: 712 LEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQN 771

Query: 477 L 477
           L
Sbjct: 772 L 772


>gi|168217202|ref|ZP_02642827.1| leucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380741|gb|EDT78220.1| leucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 816

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 17/184 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
           KG  Y+      +    +    +++V  GA  +      + +  QW      FF+++ Y 
Sbjct: 145 KGLAYRKKAPVNWCPSCQTVLANEQVVDGACERCSTEVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|163747251|ref|ZP_02154606.1| isoleucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379526|gb|EDQ03940.1| isoleucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 973

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +  T    D  DG++     AD+++ G D  R  FH+    +   +   
Sbjct: 574 ILDVWFDSGSTHAFT--LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSLLQSVGTTGRA 629

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P +++++ G D LR ++ +
Sbjct: 630 PY-RNVVTHGFTLDAKGMKMSKSIGNTIVPEKIVQQYGADILRLWVAQ 676



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 51  RQPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGYDARYIPGWDCHGLPI 105


>gi|126640135|ref|YP_001083119.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 920

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 15/140 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 521 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 573

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 574 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 633

Query: 342 DKDGLKKRVNADLANGIGNL 361
                 +R+   L   + NL
Sbjct: 634 RVSDSYRRIRNTLRFLLANL 653



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 32  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 92  EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 127


>gi|85712277|ref|ZP_01043328.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693904|gb|EAQ31851.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 944

 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 8/122 (6%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPADL++ G D  R  F +       +    P  ++V +HGF +  +G K+SKS+GNV+ 
Sbjct: 561 WPADLYLEGSDQHRGWFQSSLVTGVAMYEQAPY-RQVLTHGFTVDAQGRKMSKSIGNVVA 619

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P +V+ ++G D LR ++      G+    D+  + KR +AD    I N  SR +   L  
Sbjct: 620 PQDVMNKLGGDILRLWVASADYSGEMTVSDE--ILKR-SADAYRRIRN-TSRFLLANLSG 675

Query: 373 YD 374
           YD
Sbjct: 676 YD 677



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N Q HIGHA   I+ D++ +   L   D  +T G D HG        +K  K  Q   
Sbjct: 59  YANGQIHIGHAVNKILKDIIIKSKTLSDFDAPYTPGWDCHGLPIELQVEKKHGKPGQKLD 118

Query: 67  VT---------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +           +  +DQ   +F+ +  VL    + ++    K+  D+ R L  KI DKG
Sbjct: 119 LAEFRKHCRDYAQTQIDQQREDFKRLG-VLGDWDNPYLTMNFKQEADSVRAL-AKIIDKG 176

Query: 118 DIYKG 122
            +++G
Sbjct: 177 HLHQG 181


>gi|261349975|ref|ZP_05975392.1| leucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860758|gb|EFC93056.1| leucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 951

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ++EKL+++ A  YP+   HIGH     + DV ARF R++G +VLF       G  +   A
Sbjct: 25 DKEKLFLTVAFPYPSGAMHIGHGRTYTVPDVYARFKRMEGYNVLFPMAWHVTGAPVIGIA 84

Query: 63 Q 63
          +
Sbjct: 85 E 85


>gi|193075938|gb|ABO10517.2| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 15/140 (10%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +       D  +       PADL++ G D  R  F +    +  +    P  
Sbjct: 546 VWFDSGTTHYAVLEQRDELES------PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY- 598

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFY 341
           K + +HGF +   G K+SKSLGN I   E+I+++G D LR ++       EIA  K+ F 
Sbjct: 599 KALLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFS 658

Query: 342 DKDGLKKRVNADLANGIGNL 361
                 +R+   L   + NL
Sbjct: 659 RVSDSYRRIRNTLRFLLANL 678



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|42557781|emb|CAF28754.1| putative valyl tRNA synthetase [uncultured crenarchaeote]
          Length = 781

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 23/144 (15%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           VK G  + +   +TFD               W+D+  + L  T Y  + D   AK +P  
Sbjct: 443 VKCGHSEFTGDERTFD--------------TWMDSSISPLFVTKYSKDVDFF-AKTYPTQ 487

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-----HKGEKISKSLGNVIDPI 314
           +    KDI+R    Y    +L       K  +S  +I+       GEK+SKS GNVIDP 
Sbjct: 488 IRPQAKDIVRTWLYY---TMLRCYQLTEKLAWSDVWIMGYGVDEYGEKMSKSKGNVIDPF 544

Query: 315 EVIEEVGVDALRYFLVREIACGKD 338
            VI + G D  R++   E   G+D
Sbjct: 545 PVINKHGADTFRFWSAIEANHGQD 568


>gi|87311335|ref|ZP_01093456.1| putative leucyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87285915|gb|EAQ77828.1| putative leucyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   EK+Y+     YP+    H+GH       D++ R+ R+ G  VL   G D  G    
Sbjct: 28  MPSGEKMYVLDMFPYPSGDGLHVGHPEGYTATDIVCRYARMQGKSVLHPMGFDAFGLPAE 87

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   +V  ++N  NF     +L  SYD
Sbjct: 88  EHAIKTGTPPRVQTEKNIANFTRQLKMLGFSYD 120



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 41/183 (22%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P  V++E G D+LR +         + F       K  +    +G+ N 
Sbjct: 713 KMSKSRGNVVNPDIVVKEYGADSLRLY---------EMFMGPLEATKPWSMAGVSGVRNF 763

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
           + R   +I+ D          F E+   + +V     QEI     QN++IHR +  V   
Sbjct: 764 LDRVWRLIVDD----------FAETTTLLAAV-----QEIEPTAEQNKVIHRTIEAVTRD 808

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR------QLAILLQAFVPKLANKIF 474
           +S ++  F+      ++ TN        + T E +R       L ++L A+ P +A +++
Sbjct: 809 LSRLE--FNTPIARMMEFTN--------FFTKEEVRPKSAMKSLVLMLSAYAPHIAEELW 858

Query: 475 DIL 477
            +L
Sbjct: 859 AVL 861


>gi|116512741|ref|YP_811648.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108395|gb|ABJ73535.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 932

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 31/274 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+  D      +PADL++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSW---NGVLNERDYLS---FPADLYLEGSDQYRGWFNSSITTSVAVNGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF+L  KG K+SKS+GN I P +V ++ G D LR + V  I    D     
Sbjct: 576 PY-KAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLW-VASIDTESDVRVSM 633

Query: 344 DGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVL 398
           D L +   V   + N +  L++ +     K+ DG+      F E    D+ +L   + ++
Sbjct: 634 DILSQVSEVYRKIRNTLRFLIANTSDFNPKE-DGI-----DFAELRPVDKYMLVKFNELV 687

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRAS--TVLYVTV 452
           ++I +   N         +I+ ++      Y D  K   +     +P+R S  TV+YV  
Sbjct: 688 KQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYV-- 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +++ L  +L   +P  A + +  L    EN  +
Sbjct: 746 -ILKDLVKVLVPILPHTAEETWTYLEHEPENFAY 778



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R+  + G    +  G D HG  I +    AG+  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +  + D  +D    T    +      ++ K+++KG 
Sbjct: 118 LDYLEECRKYAMKQVDMQRSDFKSLGVLAD--WDRPYLTLLPEYEAAQIRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGQKPIYWSPSSESSLAEAEI 198


>gi|319788017|ref|YP_004147492.1| valyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466529|gb|ADV28261.1| valyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 966

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA++  + D L RFHR+DG DVL+  GTD           +AG+ T++ V +N
Sbjct: 50 HMGHAFQHTLMDALVRFHRMDGHDVLWQMGTD-----------HAGIATEMVVSRN 94



 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 12/79 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL-HKGEKISKS 306
           ++ P+ + V G DI+     +W A ++ A       +P  + V+  G I   +G+K+SKS
Sbjct: 525 RYLPSSVLVTGFDII----FFWVARMIMATDHFTGKVPF-RDVYITGLIRDAQGQKMSKS 579

Query: 307 LGNVIDPIEVIEEVGVDAL 325
            GNV+DP+++I+ + ++ L
Sbjct: 580 KGNVLDPLDIIDGISLEDL 598


>gi|296272197|ref|YP_003654828.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096372|gb|ADG92322.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 821

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 12/180 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI +   YP+ + H+GH     + D  ARF R    +VL   G D  G     AA
Sbjct: 29  KKDKKYILSMFPYPSGRIHMGHVRNYCLGDAFARFFRKSNFNVLHPIGWDSFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDKG 117
               +  K +  +N    R     L +S   F +  E    D     W+     K+ ++G
Sbjct: 89  IKHKLHPKKWTYENIDYMRKELHGLGLS---FSKNREFATSDELYTRWEQEFIIKMFEEG 145

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +YK   +  +   D     ++++ +G   +       PV+  E  GY+  ++ +  +LL
Sbjct: 146 LLYKKSTTVNWCPHDLTVLANEQLEEGCCWRC----GTPVEQKEMPGYYVAITKFAQELL 201



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 30/43 (69%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           KK+ + G +L  G K+SKS GNV+DP +++E+ G D  R F++
Sbjct: 572 KKLLTQGMVLKDGAKMSKSKGNVVDPDKIVEKYGADTARLFML 614


>gi|293400597|ref|ZP_06644742.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305623|gb|EFE46867.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 799

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + A
Sbjct: 31  KPKFYVLDMFPYPSGNGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQFA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F  +N  +FR+    L  SY  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 91  IQTGNHPAEFTKKNVDHFREQIQSLGFSYDWDREISTTDPDYYKWTQWIFLQLYKKGLAY 150



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFIL-HKGEKISKSLG 308
           P DL+V G +    H +Y   W   L    +   K    K+F  G IL    EK+SKS G
Sbjct: 522 PVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVKTKEPFQKLFHQGMILGENNEKMSKSRG 581

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NV++P +++E  G DALR +
Sbjct: 582 NVVNPDDIVESHGADALRVY 601


>gi|168213858|ref|ZP_02639483.1| leucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714638|gb|EDT26820.1| leucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 816

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 17/184 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
           KG  Y+      +    +    +++V  GA  +      + +  QW      FF+++ Y 
Sbjct: 145 KGLAYRKKAPVNWCPSCQTVLANEQVVDGACERCSTEVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202



 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|168204680|ref|ZP_02630685.1| leucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|182624131|ref|ZP_02951918.1| leucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|170663753|gb|EDT16436.1| leucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|177910747|gb|EDT73107.1| leucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 816

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 17/184 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
           KG  Y+      +    +    +++V  GA  +      + +  QW      FF+++ Y 
Sbjct: 145 KGLAYRKKAPVNWCPSCQTVLANEQVVDGACERCSTEVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|153826757|ref|ZP_01979424.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739408|gb|EDM53648.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|153801875|ref|ZP_01956461.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122586|gb|EAY41329.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|56477955|ref|YP_159544.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821070|sp|Q5P221|SYI_AZOSE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56313998|emb|CAI08643.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 939

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T + T        D      WPA L++ G D  R  FH+       +    P  
Sbjct: 545 VWFDSGTTHWTVLRGSHAADSQ----WPAALYLEGSDQHRGWFHSSLLTGCAIDGRAPY- 599

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +HGF++  +G+K+SKS GNV+ P EV +++G + LR ++ 
Sbjct: 600 DALLTHGFVVDGQGKKMSKSKGNVVAPQEVSDKLGAEILRLWVA 643



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFVLHDGPPYANGDIHIGHAVNKILKDIIVRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|47459242|ref|YP_016104.1| isoleucyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614217|sp|Q6KHN7|SYI_MYCMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|47458571|gb|AAT27893.1| isoleucyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 885

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 17/158 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T   T+ G     +G+     P D+++ G D  R  F++    + +     
Sbjct: 522 IMDVWFDSGT---TSMGV--KIEGAPV---PWDVYLEGSDQYRGWFNSSLINSVVYYNQA 573

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  KK+ SHGF+L  KG K+SKS GNV+ P E+I + G D LR ++       ++  G++
Sbjct: 574 PF-KKLVSHGFVLDEKGNKMSKSKGNVVLPQEIISKFGADILRLWVANSEYTSDVTIGEN 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
                  + ++        I NLV       LK+  G+
Sbjct: 633 IINQNVEIYRKFRNTFRFLIANLVDFDYKKDLKELTGI 670



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ R+  L G    F  G D HG  I
Sbjct: 60  YANGDLHIGHALNKILKDIVVRYKSLSGFYAPFVPGWDTHGLPI 103


>gi|256370585|ref|YP_003108410.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009377|gb|ACU52737.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 857

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           NP+ ++ K++ P    V   DIL F  I      + L  N P     F+      K  K+
Sbjct: 476 NPNNNEIKYYYPTQDLVTAPDILFFWVIRMIMSGYYLMNNYPFKNIYFTGIVKDKKNRKM 535

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN  +PI++I++ G DA+R  ++     G D  +D++   K  N  L N I N   
Sbjct: 536 SKSLGNSPNPIDLIKKYGADAVRVGVLLSSNAGIDLIFDENICIKGRN--LTNKIWNAFK 593

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILS----VCSRVLQEIRENMQNQLIHRALAQVIS 419
                ++K + G+      +  SDE  +       ++ L+ I+  ++N  I  +   +  
Sbjct: 594 -----LIKSFKGVFYLKQNY--SDELTIKWFDYKLNKCLELIKYYIKNYKISESFILIYK 646

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L       F  +K   +K  +      +   T+   +Q+  L   ++P L  KI+  L
Sbjct: 647 LFWNDFCSFFLEK---IKSKSKILNKKIRNKTIFFFKQIIKLFHPYIPFLTEKIWQFL 701


>gi|239979402|ref|ZP_04701926.1| leucyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291451277|ref|ZP_06590667.1| leucyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291354226|gb|EFE81128.1| leucyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 965

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 60  RPKKFIMDMFPYPSGAGLHVGHPLGYIATDVYARFQRMTGHNVLHTLGFDAFGLPAEQYA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   +   + N  N R     L + +D+
Sbjct: 120 VQTGTHPRTSTEANMANMRSQLRRLGLGHDN 150


>gi|294947624|ref|XP_002785427.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
           ATCC 50983]
 gi|239899308|gb|EER17223.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
           ATCC 50983]
          Length = 927

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 18/249 (7%)

Query: 248 PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           P  +K KF   +PAD    G D  R  F+ +   A  L  N P  K +  +G IL   G+
Sbjct: 593 PFENKEKFEENFPADFVAEGLDQTRGWFYTMTVIATHL-FNQPAFKNLIVNGLILAADGK 651

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANG 357
           K+SK L N  DP EV +  G DA+R ++        +   + ++G++   K V   L N 
Sbjct: 652 KMSKRLKNYPDPTEVFDRYGADAVRMYMCNSPVVRAEPLKFREEGVRDTVKEVFLPLYNA 711

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRA 413
              LV  +     ++    +P      +S    D  I +    +L+  R  +++  ++  
Sbjct: 712 YRFLVQETCRFEKQENTKFVPDRACIHKSTNPTDHWIYATSQELLKYTRTELESYRLYTI 771

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLAN 471
           + +++S + ++  ++  +   +  +   D+ +T+  L    +V+  L I+L    P +  
Sbjct: 772 VGKLVSFLDDLTNWY-IRMNRDRMRGGVDKENTLESLNTLYDVMLNLTIVLAPITPFITE 830

Query: 472 KIFDILFVA 480
           +I+  L +A
Sbjct: 831 QIYQNLRLA 839


>gi|157964761|ref|YP_001499585.1| isoleucyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844537|gb|ABV85038.1| Isoleucyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 1106

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 617 HGVILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 676

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 677 TLRLFIKPIWNAYHFFTMYANADSLKGELNFSSKNV-------------------LDVYI 717

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKK-TNPDRAST 446
           LS     +Q+I E++ N     A   V      ++ ++      + W+ +K T+   A  
Sbjct: 718 LSKLKIAVQKIEESLDNFDTQTAYHTVSEFFEVLNNWYIRRSRARFWKSEKDTDKQNAYN 777

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  +E    +AI + A VP ++  I+  L   +E
Sbjct: 778 TLYSCLET---MAIAMSALVPMISEAIYKGLRHCEE 810


>gi|160895368|ref|ZP_02076139.1| hypothetical protein CLOL250_02927 [Clostridium sp. L2-50]
 gi|156863061|gb|EDO56492.1| hypothetical protein CLOL250_02927 [Clostridium sp. L2-50]
          Length = 805

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 9/103 (8%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-PLP---KKVFSHGFIL-HKGEKIS 304
           K+W P D +  G +    H +Y   W  FL    + P P   +K  SHG IL   GEK+S
Sbjct: 529 KYWLPVDWYNGGMEHTTLHLLYSRFWHKFLYDQGVVPTPEPYQKRTSHGMILGENGEKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GNV++P +++   G D LR + +   A      +  DG+K
Sbjct: 589 KSRGNVVNPDDIVNAYGADTLRTYEMFIGAFDLAASWSDDGVK 631



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 19/183 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      A
Sbjct: 32  KPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENYA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K     N   F+     L  S+  D  I TT+  ++   + ++ K+   G  Y
Sbjct: 92  IKNKIHPKEVTKNNVARFKAQLHSLGYSFDWDREINTTDPEYYKWTQWIFLKLFKAGLAY 151

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           K       C S    L +E   N      GA          PV    +  +  +++ Y D
Sbjct: 152 KKEMPINWCTSCKVGLANEEVVNGVCERCGA----------PVVRKVKSEWMLKITEYAD 201

Query: 175 KLL 177
           KL+
Sbjct: 202 KLI 204


>gi|114320013|ref|YP_741696.1| isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312139|sp|Q0AAD1|SYI_ALHEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114226407|gb|ABI56206.1| Isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 941

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 22/194 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   + T    L+  D  +    PADL++ G D  R  F +    +  +    
Sbjct: 532 ILDVWFDSGVTHATV---LERRDELQV---PADLYLEGSDQHRGWFQSSLLTSVGVRETA 585

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF +  KG K+SKS GNV+ P +V++ +G D LR ++       +      
Sbjct: 586 PY-KGVLTHGFTVDEKGHKMSKSRGNVVAPQKVMDTLGADILRLWVASSDYSAEMAV--S 642

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS-----RVL 398
           DG+ KR  AD    + N    +   +L + +G  P   A    D   L   +      + 
Sbjct: 643 DGILKR-TADAYRRMRN----TARFLLANLNGFEPAEHAVAPPDMLPLDRWAVDRAYLLQ 697

Query: 399 QEIRENMQNQLIHR 412
           Q++RE  +    HR
Sbjct: 698 QQVREAYERYEFHR 711



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------AKAAQNAGVT 68
           Y N   HIGHA   I+ D++ +   +DG DV +  G D HG  I       +    A V+
Sbjct: 59  YANGDIHIGHAVNKILKDIIIKARSMDGYDVPYVPGWDCHGLPIELMVEKKRGKAGAKVS 118

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIR 96
            + F D   R F   A  +D   +DF R
Sbjct: 119 PRAFRDA-CREF--AASQVDGQREDFKR 143


>gi|316976560|gb|EFV59837.1| valyl-tRNA synthetase [Trichinella spiralis]
          Length = 880

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 154/412 (37%), Gaps = 76/412 (18%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--YYESH--PE 185
           L+ + Y   DE+ + A     N     +  + E+ ++  +S  +D  +S   +  H  P 
Sbjct: 288 LKAQWYVKCDEMAQNAAAAVRNGDMRIIPNIHEKTWYKWMSGIRDWCISRQLWWGHRIPA 347

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY---------IMYVWIDALT 236
           + + I  R +                +     IK  + PQ          ++  W  +  
Sbjct: 348 YFVSIRGREKGNDACDDSWVVARTEAEAMQKAIKKFNVPQSEITLHQDEDVLDTWFSSAL 407

Query: 237 NYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPA---FL---LSANLPLPK 288
             ++  G+   P+ +K   +F+P  L   G DIL F    W A   FL   L+  LP   
Sbjct: 408 FPISIFGW---PNQTKDLEEFYPGTLLETGYDILFF----WVAKMVFLCQKLTGKLPF-T 459

Query: 289 KVFSHGFILHK-GEKISKSLGNVIDPIEVIE----------------------------- 318
            ++ H  I    G K+SKSLGNVIDP++VI                              
Sbjct: 460 DIYLHSVIRDAHGRKMSKSLGNVIDPLDVINGISLEKLHNKLLSSNLDPAEVQRAKEGQK 519

Query: 319 --------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                   E G DALR+ L    A G+D   + D L+ +      N I N   R V M L
Sbjct: 520 RDYPNGIPECGTDALRFALCAYAAQGRD--INLDVLRIQGYRHFCNKIWN-ACRFVMMTL 576

Query: 371 -KDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVSEVD 425
            KD+            TE D  ILS  S  ++   +  +N    +A     +  L    D
Sbjct: 577 GKDFKAEPEFKVNKMATEVDLWILSRLSTAVRLCNDAFENYEFSKATTACYNFWLYELCD 636

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP  ++  +P+  S    V    +     L+  F+P +A +++  L
Sbjct: 637 VYLECIKP-VMRDADPEVQSATKRVLCFCVDSALRLIAPFMPFIAEELWQRL 687


>gi|322435729|ref|YP_004217941.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163456|gb|ADW69161.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 855

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 10/195 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y    + YP+   HIGH     I D LARF  + G +VL   G D  G     AA 
Sbjct: 58  KPKYYCLEMLPYPSGALHIGHVRNYAIGDALARFMWMRGHNVLHPMGWDAFGLPAENAAL 117

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V  + +   N  + +     L + +D    + T    ++   + L+ K+ ++G  Y 
Sbjct: 118 KNNVPPREWTLSNIASMKKQFQRLGMGFDWSKEVTTCLPDYYRWNQWLFLKMFERGLAYR 177

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-- 178
           K     W         N+  +     G+ +      V+  +   +F R++ Y D+LL+  
Sbjct: 178 KKSKVNWCPQCATVLANEQVI----QGRCWRHDETVVEQRDLTQWFLRITKYADELLTGL 233

Query: 179 -YYESHPEFILPIER 192
              E  PE +  ++R
Sbjct: 234 DKLEGWPEKVRTMQR 248



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/240 (20%), Positives = 100/240 (41%), Gaps = 35/240 (14%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL----LSANLPLPKKVFSHGFILHKG 300
           D +K  +W P D ++ G +    H IY   W   +    L  N    +++F+ G ++  G
Sbjct: 556 DSAKVNYWFPIDQYIGGVEHAILHLIYSRFWTKVMRDLGLIVNDEPAERLFTQGMVIKDG 615

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+ P  +I+  G DA R + +      +D  + ++G+          GI  
Sbjct: 616 AKMSKSKGNVVSPDLMIDRYGADATRMYALFAAPPDRDLDWQEEGVA---------GISR 666

Query: 361 LVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
            + +   +  K    +G     G    +D ++L    + + ++  +   +   + +++ +
Sbjct: 667 FLGKIFRLTTKFAQLEG-----GEAGPADAALLRKLHQTIAKVTHDFSGRWHFNTSISSI 721

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+E+             +   D            +R L  ++  F P LA ++++ L
Sbjct: 722 MILVNEIT----------ANEAAIDAGQVTAATVKSTLRSLIQMIAPFAPFLAAELWETL 771


>gi|126738687|ref|ZP_01754392.1| leucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126720486|gb|EBA17192.1| leucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 855

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKASTGHNVLHPMGFDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
            +G   K +   N     +    L +S D      T ++ ++   + L+    +K  +Y 
Sbjct: 91  ASGGHPKDWTYANIDTMVEQMKPLGLSLDWSRMFATCDEEYYGQQQALFLDFLEKDLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K     W  +      N  E  +G  G    A    V+  E   +FF++S Y D+LLS
Sbjct: 151 KNAVVNWDPVDMTVLAN--EQVEGGRGWRSGAL---VERRELTQWFFKISDYSDELLS 203



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 29/173 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 626 KMSKSKNNVVDPLSIISSYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 683

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +M           P A  + DE +L    + ++++   +++   + A+A++    
Sbjct: 684 CDKIGAM----------DPDAKGQGDEDLLREMHKAIRDVTLGVESFGFNAAIAKLYGFT 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +                  ++        + I  LA L+    P LA  I+
Sbjct: 734 NTL-----------------AKSKAGAAAQKQAIMTLAQLMSPMTPHLAEDIW 769


>gi|323440965|gb|EGA98672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442282|gb|EGA99912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 917

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ ++++KG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMAEKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|314936645|ref|ZP_07843992.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655264|gb|EFS19009.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 916

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY------ 226
           L  +Y  + + I+  E  N V    +    ++   R+  D    G   P  P        
Sbjct: 463 LPVFYAENGDIIMTKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKET 522

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
            IM VW D+ +++    G L+         +PADL+  G D  R  F++    A      
Sbjct: 523 DIMDVWFDSGSSH---RGVLET---RPELHFPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPNQVVKQKGADIARLWV 622



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D++ R+  + G    +  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A + +++   DF R            T K  ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|296117462|ref|ZP_06836049.1| isoleucyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295975983|gb|EFG82774.1| isoleucyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 957

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 19/152 (12%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           PDD +    I+ VW ++ + +    G+ D P       +PAD+++ G D  R  F +   
Sbjct: 550 PDDYEQVFDIVDVWFESGSTHAFVLGHGDMP-------FPADVYLEGSDQHRGWFQSSLL 602

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV---- 330
            +       P  + + ++GF+L  +G K+SKSLGNVI P +V + +G D LR +++    
Sbjct: 603 ESVGTKGIAPF-RTLVTNGFVLDEQGRKMSKSLGNVIAPQDVNDSLGADILRLWVMNSDT 661

Query: 331 -REIACGKDGFYDKDGLKKRVNADLANGIGNL 361
             ++  GKD    +  L +R+   L   +G L
Sbjct: 662 NEDLRIGKDILKQQGELYRRLRNTLRWLLGAL 693



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 27/55 (49%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+   +     Y N   HIGHA   I+ DV+ R HR+ G  + +  G D HG  I
Sbjct: 54  RQVFMLHDGPPYANGHLHIGHALNKILKDVINRAHRMSGYGIHYVPGWDCHGLPI 108


>gi|229530488|ref|ZP_04419876.1| isoleucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332261|gb|EEN97749.1| isoleucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|148643232|ref|YP_001273745.1| leucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222445463|ref|ZP_03607978.1| hypothetical protein METSMIALI_01102 [Methanobrevibacter smithii
          DSM 2375]
 gi|148552249|gb|ABQ87377.1| leucyl-tRNA synthetase, LeuS [Methanobrevibacter smithii ATCC
          35061]
 gi|222435028|gb|EEE42193.1| hypothetical protein METSMIALI_01102 [Methanobrevibacter smithii
          DSM 2375]
          Length = 951

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ++EKL+++ A  YP+   HIGH     + DV ARF R++G +VLF       G  +   A
Sbjct: 25 DKEKLFLTVAFPYPSGAMHIGHGRTYTVPDVYARFKRMEGYNVLFPMAWHVTGAPVIGIA 84

Query: 63 Q 63
          +
Sbjct: 85 E 85


>gi|145296343|ref|YP_001139164.1| valyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140846263|dbj|BAF55262.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 903

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 46/176 (26%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 418 MHDWTISRQLW-WGHRIPIWYGPNDEIICVGPDEQAPEGYVQDPD-VLDTWFSSALWPFS 475

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLP 287
           T G+   P+ +    KF+P  + V   DIL            F A   P  L       P
Sbjct: 476 TMGW---PEKTPELEKFYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGKDGRP 532

Query: 288 K----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     +F HG +  + G K+SKSLGN IDP++ +E  G DALR+ L R    G D
Sbjct: 533 QVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVENYGADALRFTLARGANPGVD 588



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 26/175 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           +K   S  +  PN   Q H+GHA +  + D LAR  R+ G +VL+  G D  G     K+
Sbjct: 50  DKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKV 109

Query: 59  AKAAQNAGVTTKVFVDQN-----------------SRNFRDMADVLDISYDDFIRTTEKR 101
            +  +     T+   D+                      R + D +D S + F  T +  
Sbjct: 110 EEMLKETEGKTRYDYDREEFIAKVWEWKQEYGGKIGEQMRAIGDSVDWSRERF--TLDDG 167

Query: 102 HHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                + ++KK+ D G IY+      W  + + A  + + +YK  +G+  + ++ 
Sbjct: 168 LSRAVQTIFKKLFDAGFIYQANRLVNWSPVLETAVSDIEVIYKDVEGELVSIRYG 222


>gi|86131303|ref|ZP_01049902.1| Leucyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818714|gb|EAQ39874.1| Leucyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 959

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 24/141 (17%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           ++ K Y+     YP+ A  H+GH    I +DV AR+ RL G +VL   G D  G    Q 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDVYARYKRLKGFNVLHPQGYDSFGLPAEQY 88

Query: 58  IAKAAQNAGVTTKVFVDQNSRN-------FRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
             +  Q+  VTTKV ++    N       +R+  D +  S+D    +RT+   ++   + 
Sbjct: 89  AIQTGQHPAVTTKVNIEGGVDNQGNEIAGYRNQLDKIGFSFDWSREVRTSNPEYYKWTQ- 147

Query: 109 LWKKISDKGDIYKGCYSGWYS 129
            W        I+   ++ WY+
Sbjct: 148 -W--------IFTELFNSWYN 159


>gi|331244566|ref|XP_003334923.1| vars protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
 gi|309313913|gb|EFP90504.1| vars protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 924

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 12/79 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKS 306
           KF+P+ L   G DI+ F    W A +      L+  +P   +VF H  I +  G K+SKS
Sbjct: 401 KFYPSSLLETGWDIIFF----WVAKMTILGVKLTGKMPF-SEVFCHAMIRYAHGRKMSKS 455

Query: 307 LGNVIDPIEVIEEVGVDAL 325
            GNVIDPI VI+ + +DAL
Sbjct: 456 KGNVIDPINVIDGITLDAL 474


>gi|312080189|ref|XP_003142494.1| hypothetical protein LOAG_06912 [Loa loa]
 gi|307762342|gb|EFO21576.1| hypothetical protein LOAG_06912 [Loa loa]
          Length = 877

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI +   YP+ + H+GH     I+D LAR+++L+G +V+   G D  G     AA+
Sbjct: 66  RPKKYILSMYPYPSGRLHMGHMRVYTISDALARYYKLNGYNVIHPIGWDAFGLPAENAAR 125

Query: 64  NAGVTTKVFVDQN 76
             GV    +   N
Sbjct: 126 EVGVDPAQWTASN 138


>gi|260553015|ref|ZP_05825930.1| isoleucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405257|gb|EEW98754.1| isoleucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +   G K+SKSLGN I  
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY-KALLTHGFTVDENGRKLSKSLGNYIPL 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            E+I+++G D LR ++       EIA  K+ F       +R+              ++  
Sbjct: 626 EEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIR------------NTLRF 673

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + +G  P+  A    D  ++++   +LQ   E  Q 
Sbjct: 674 LLANLNGFKPSTDALAVDD--LIALDQYILQRANEVQQT 710



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|229519956|ref|ZP_04409386.1| isoleucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229343008|gb|EEO07996.1| isoleucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|163856326|ref|YP_001630624.1| valyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163260054|emb|CAP42355.1| valS [Bordetella petrii]
          Length = 961

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 15/107 (14%)

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------ 279
           ++  W  +     TT G+  D PD    ++ P+ + V G DI+ F    W A +      
Sbjct: 494 VLDTWFSSALVPFTTLGWPEDTPD--LRRYLPSSVLVTGFDIIFF----WVARMVMMTTH 547

Query: 280 LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           L+  +P  K V+ HG I    G+K+SKS GN +DP+++I+ +G+D L
Sbjct: 548 LTGQIPF-KHVYVHGLIRDADGQKMSKSKGNTLDPVDLIDGIGLDGL 593



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA+   I D L R+HR+ G D +F  GTD           +AG+ T++ V++
Sbjct: 69  HMGHAFNQTIMDGLVRYHRMRGDDTVFVPGTD-----------HAGIATQIVVER 112


>gi|296242742|ref|YP_003650229.1| valyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095326|gb|ADG91277.1| valyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 818

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PL 286
            W D+  + L  TGYL N +  K  F    L   G+DI+R    Y    L +  L   P 
Sbjct: 470 TWFDSSISVLYVTGYLRNHELFKKAF-RNTLRPQGQDIIRTWLYY--TILRTYQLTGQPA 526

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            K V   G  L  KGE + KS GNVIDP   +E+ G DA RY+       G D
Sbjct: 527 FKWVRITGMGLDEKGEAMHKSKGNVIDPDPYVEKYGADAFRYWAAASSKLGYD 579


>gi|224537150|ref|ZP_03677689.1| hypothetical protein BACCELL_02027 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521205|gb|EEF90310.1| hypothetical protein BACCELL_02027 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +   +D    IRT E  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTINNIDRYREQLDKIGFCFDWNREIRTCEPEYYHWTQWAFQKM 142



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/224 (19%), Positives = 97/224 (43%), Gaps = 36/224 (16%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEFANAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G+   + +  S+        I
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVYRFIKKFWSLFYDRNGSYI 784

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T    T+ +   L    ++++++  +++    + +++  +  V+E+     ++K     
Sbjct: 785 VTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSVSAFMICVNELFSLKCSKK----- 836

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                          E++ QL I+L  F P +  +++D L  AD
Sbjct: 837 ---------------EILNQLVIVLAPFAPHVCEELWDTLGHAD 865


>gi|189464803|ref|ZP_03013588.1| hypothetical protein BACINT_01147 [Bacteroides intestinalis DSM
           17393]
 gi|189437077|gb|EDV06062.1| hypothetical protein BACINT_01147 [Bacteroides intestinalis DSM
           17393]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 3/113 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    + A
Sbjct: 30  KQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
              G    +    N   +R+  D +   +D    IRT E  ++   +  ++K+
Sbjct: 90  IQTGQHPAITTINNIDRYREQLDKIGFCFDWSREIRTCEPEYYHWTQWAFQKM 142



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 38/221 (17%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  DIL   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++
Sbjct: 677 DVNIVSNDILDLEAFKAWRPEFANAEFILEDGKYICGWAV---EKMSKSMFNVVNPDMIV 733

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGM 376
           E+ G D LR + +      +   +D +G+         +G+   + +  S+   ++ + M
Sbjct: 734 EKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVYRFIKKFWSLFYDRNGNYM 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +    A  E  +S+  +  +V  +I +   N  +   +  V  L S             L
Sbjct: 785 VTDEPATKEELKSLHKLIKKVTSDIEQFSYNTSVSAFMICVNELFS-------------L 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K +             E++ QL I+L  F P +  +++D L
Sbjct: 832 KCSKK-----------EILNQLIIVLAPFAPHVCEELWDTL 861


>gi|254291960|ref|ZP_04962740.1| isoleucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422099|gb|EDN14066.1| isoleucyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|21325147|dbj|BAB99769.1| Valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 900

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 46/176 (26%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 415 MHDWTISRQLW-WGHRIPIWYGPNDEIICVGPDEQAPEGYVQDPD-VLDTWFSSALWPFS 472

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLP 287
           T G+   P+ +    KF+P  + V   DIL            F A   P  L       P
Sbjct: 473 TMGW---PEKTPELEKFYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGKDGRP 529

Query: 288 K----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     +F HG +  + G K+SKSLGN IDP++ +E  G DALR+ L R    G D
Sbjct: 530 QVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVENYGADALRFTLARGANPGVD 585



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 26/175 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           +K   S  +  PN   Q H+GHA +  + D LAR  R+ G +VL+  G D  G     K+
Sbjct: 47  DKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKV 106

Query: 59  AKAAQNAGVTTKVFVDQN-----------------SRNFRDMADVLDISYDDFIRTTEKR 101
            +  +     T+   D+                      R + D +D S + F  T +  
Sbjct: 107 EEMLKETEGKTRYDYDREEFIAKVWEWKQEYGGKIGEQMRAIGDSVDWSRERF--TLDDG 164

Query: 102 HHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                + ++KK+ D G IY+      W  + + A  + + +YK  +G+  + ++ 
Sbjct: 165 LSRAVQTIFKKLFDAGLIYQANRLVNWSPVLETAVSDIEVIYKDVEGELVSIRYG 219


>gi|329728844|gb|EGG65265.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 917

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|225011521|ref|ZP_03701959.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004024|gb|EEG41996.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 876

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 26/271 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +    +T    + NP+     ++ P    V G DIL F    W A ++ +   
Sbjct: 457 VLDTWFSSWLWPITVFDGIRNPENEDINYYYPTQDLVTGPDILFF----WVARMIVSGYE 512

Query: 286 L-PKKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
              +K FS+ ++       KG K+SK LGN  D +++IE  G DA+R  L+   A G D 
Sbjct: 513 YRGQKPFSNVYLTGLVRDEKGRKMSKQLGNSPDALKLIENYGADAVRVGLMLSSAAGNDL 572

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +D+   ++  N   AN I N   R +     D     PT  A TE+ +   +  ++ + 
Sbjct: 573 LFDESLCQQGKN--FANKIWN-AYRLIEGWEIDKTNH-PTEAA-TEALDWYQNHFNKTIG 627

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVI 455
            + EN +   I  AL  +  L+      +D    W L+   P+    +   T    V + 
Sbjct: 628 WVDENFEKYRISDALMTIYKLI------WDDFCSWLLELVKPEYGKPIDRYTHTRIVGLF 681

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCF 486
                LL  F+P L  +++  +   + N+  
Sbjct: 682 ENNLRLLHPFMPFLTEELWHFISPRETNQAL 712


>gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|6137710|pdb|1QU3|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|10121057|pdb|1FFY|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
          Length = 917

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|300693845|ref|YP_003749818.1| leucine--tRNA ligase (leus) [Ralstonia solanacearum PSI07]
 gi|299075882|emb|CBJ35192.1| putative leucine--tRNA ligase (leuS) [Ralstonia solanacearum PSI07]
          Length = 738

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K +I     +   + H+GHA   ++AD  ARF R+ G DVL+T+G D  G     A
Sbjct: 41  RGRPKWFIVELPPFATGRLHLGHARNYVLADAGARFKRMQGYDVLYTSGFDTFGLPTELA 100

Query: 62  AQNAGV 67
           A  AG 
Sbjct: 101 ASAAGC 106



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 29/268 (10%)

Query: 253 AKFW-PADLHVIGKDILR---FHAIYWPAFLLS---ANLPLP-KKVFSHGFILHKGEKIS 304
           A+ W P DL + G D +R   FH       L     A++  P   + + G +     K+S
Sbjct: 475 AQAWLPVDLMIGGADQVRSCFFHVRMIARALRRMDIADIEEPVTTLLALGMVKQDNRKMS 534

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN +D   +I   G DALR  ++   A  +D F   + L +R +A L   + + V +
Sbjct: 535 KSAGNAVDMQSIITRYGADALRLAIIGAAAPERD-FNWSEELVRREHAFLTR-LWHFVDK 592

Query: 365 SVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQ-------EIRENMQNQLIHRAL 414
              +I    +  DG  P     T  D ++  +  R+          +  ++Q    H AL
Sbjct: 593 VGELIGDRDRAPDGAGPAGAGKTAPDGALEKLGKRMEGWLATGGYRMTADLQRHDYHLAL 652

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +  L   + + FDA     L+K  P RA  V  +  +  R + + L  F P +A  ++
Sbjct: 653 KNLKFLFDRL-QTFDA----ALRKHQPPRAQDVA-ILADATRSIVLYLGPFAPHIAEALW 706

Query: 475 DILFVADENRCF---QSLDQRLKPGFML 499
             L       C       D+ L+PG  L
Sbjct: 707 QTLGGESMVACAAWPAEPDRALEPGGAL 734


>gi|192359410|ref|YP_001983671.1| isoleucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685575|gb|ACE83253.1| isoleucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 935

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K+V +HGF +  KG K+SKS+GN IDP
Sbjct: 556 PADLYLEGSDQHRGWFQSSLKTSMAIHGVAPY-KQVLTHGFTIDAKGMKMSKSIGNAIDP 614

Query: 314 IEVIEEVGVDALRYFL 329
             V++++G D LR ++
Sbjct: 615 QVVMKDLGADVLRLWV 630



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           RE+  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG     K+ 
Sbjct: 51  REQFILHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIEHKVE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMA 84
           K    AG  TKV      +  RD A
Sbjct: 111 KEIGKAG--TKVDFKTFRQKCRDYA 133


>gi|189460209|ref|ZP_03008994.1| hypothetical protein BACCOP_00846 [Bacteroides coprocola DSM 17136]
 gi|189433070|gb|EDV02055.1| hypothetical protein BACCOP_00846 [Bacteroides coprocola DSM 17136]
          Length = 944

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKI 113
            A   G    +    N   +R   D +  S+  D  +RT E  ++   +  ++K+
Sbjct: 88  YAIQTGQHPAITTVNNINRYRQQLDKIGFSFDWDREVRTCEPGYYHWTQWAFQKM 142



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 51/276 (18%), Positives = 116/276 (42%), Gaps = 50/276 (18%)

Query: 214 FDWGIKIPDDP-QYIM----------YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           FD G+ + ++P Q ++          +V+    TN   + G  D  D +       D+++
Sbjct: 624 FDLGVSVKEEPFQKLVNQGMIQGRSNFVYRIKDTNTFVSLGLKDQYDVTPLH---VDVNI 680

Query: 263 IGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +  D+L   A   W     +A   L    +  G+ +   EK+SKS+ NV++P  ++E+ G
Sbjct: 681 VSNDVLDVEAFKNWRPEYNNAEFILEDGKYICGWAV---EKMSKSMYNVVNPDMIVEKYG 737

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR + +      +   +D +G+         +G+   + +  ++        +P  G
Sbjct: 738 ADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYDRQGNFMPAEG 788

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             T+ +   L    ++++++  +++    + +++  +  V+E+           LK  N 
Sbjct: 789 EPTKEE---LKAVHKLIKKVTGDIETFSYNTSISAFMICVNELT---------SLKCRNK 836

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       V+  L +++  F P LA ++++ L
Sbjct: 837 -----------AVLSDLIVIIAPFAPHLAEELWEAL 861


>gi|530444|emb|CAA83769.1| Val-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 260

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 25/199 (12%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  HG +  +   K+SKSLGN IDP++VI   G D+LR FL+     G+D  Y  + +
Sbjct: 46  KDVLIHGLVRDELNRKMSKSLGNGIDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKI 105

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIREN 404
               N    N + N  SR V + L D+    P         +++ IL+  S+    + E 
Sbjct: 106 LASWN--FINKLWN-ASRYVFLNLDDHFEFDPNFYKTDLEITNQWILTQLSKTQAYVYEK 162

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELK---------KTNPDRASTVLYVTVEVI 455
           M       A   +   V      ++    W ++         K N     T+ Y    V+
Sbjct: 163 MNKYEFSLAGNHLWDFV------WNKYCSWYIEFSKVNLSNDKFNYQTKQTLFY----VL 212

Query: 456 RQLAILLQAFVPKLANKIF 474
           +++ I+L   +P ++ +I+
Sbjct: 213 KEILIMLHPLIPFVSEEIY 231


>gi|91784973|ref|YP_560179.1| isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168144|sp|Q13UW2|SYI_BURXL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91688927|gb|ABE32127.1| Isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDELQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 NALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      A+  Q A       +++    FR +  + D  +D+  +T    +     
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGD--WDNPYKTMNFTNEAGEI 171

Query: 108 ILWKKISDKGDIYKG 122
               KI +KG +++G
Sbjct: 172 RALAKIMEKGYVFRG 186


>gi|19553575|ref|NP_601577.1| valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391219|ref|YP_226621.1| valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|90103533|sp|Q8NN37|SYV_CORGL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41326559|emb|CAF21041.1| PUTATIVE VALINE-TRNA LIGASE [Corynebacterium glutamicum ATCC 13032]
          Length = 903

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 46/176 (26%)

Query: 204 LKDLSLSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLT 240
           + D ++SR+ + WG +IP                        DP  ++  W  +     +
Sbjct: 418 MHDWTISRQLW-WGHRIPIWYGPNDEIICVGPDEQAPEGYVQDPD-VLDTWFSSALWPFS 475

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDIL-----------RFHAIYWPAFLLSANLPLP 287
           T G+   P+ +    KF+P  + V   DIL            F A   P  L       P
Sbjct: 476 TMGW---PEKTPELEKFYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGKDGRP 532

Query: 288 K----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     +F HG +  + G K+SKSLGN IDP++ +E  G DALR+ L R    G D
Sbjct: 533 QVPFTDLFLHGLVRDEHGRKMSKSLGNGIDPMDWVENYGADALRFTLARGANPGVD 588



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 26/175 (14%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           +K   S  +  PN   Q H+GHA +  + D LAR  R+ G +VL+  G D  G     K+
Sbjct: 50  DKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKV 109

Query: 59  AKAAQNAGVTTKVFVDQN-----------------SRNFRDMADVLDISYDDFIRTTEKR 101
            +  +     T+   D+                      R + D +D S + F  T +  
Sbjct: 110 EEMLKETEGKTRYDYDREEFIAKVWEWKQEYGGKIGEQMRAIGDSVDWSRERF--TLDDG 167

Query: 102 HHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                + ++KK+ D G IY+      W  + + A  + + +YK  +G+  + ++ 
Sbjct: 168 LSRAVQTIFKKLFDAGLIYQANRLVNWSPVLETAVSDIEVIYKDVEGELVSIRYG 222


>gi|126463258|ref|YP_001044372.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166231636|sp|A3PMN4|SYL_RHOS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126104922|gb|ABN77600.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 847

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 10/183 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N  + R     L +S D   +F  T +  ++   + ++  + + G +Y
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQAMFIDMMEAGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W  +      N+  +    DG+ + +   PV   E   +FFR+S Y  +LL  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSG-APVVRRELTQWFFRISDYAGELLEA 204

Query: 180 YES 182
            ++
Sbjct: 205 LDT 207



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 32/201 (15%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I + G D  R+F++ +    +D  +   G +              
Sbjct: 619 KMSKSKKNVVDPMNIIRQFGADTARWFVMSDSPPERDVEWTASGAEA------------- 665

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            S+ +  + +  D +    G     D ++    +R + E+ + ++    ++A+A++    
Sbjct: 666 ASKHLHRVWRLADEISRADGEANAEDGALDKATARAIAEVTQGVEGFAFNKAIAKLYEFT 725

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + + R        E KK                +R +A L+   VP LA +++ +L    
Sbjct: 726 NTLSRSGAGA---EAKK--------------RAMRTMAQLMSPMVPHLAEEVWAML--GG 766

Query: 482 ENRCFQSLDQRLKPGFMLHKT 502
           E    Q+   +  P  ++  T
Sbjct: 767 EGLVAQAAWPKADPALLIDDT 787


>gi|254227134|ref|ZP_04920678.1| isoleucyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620342|gb|EAZ48732.1| isoleucyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|298694484|gb|ADI97706.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 917

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|296453432|ref|YP_003660575.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296182863|gb|ADG99744.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 911

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 519 IMDTWATSSLTPQIVTHWAEPDEASKALFASTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 578

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 579 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 634

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 635 ATYDIGQMKIGRRLAIKLLNA 655



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 44  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 103

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEK---RHHDT 105
             QN  GV   V +  +  +F+           D  D + IS  +FI   E+   +    
Sbjct: 104 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKL 162

Query: 106 CRILWKKIS 114
              LW+K+ 
Sbjct: 163 FEALWRKLG 171


>gi|225010896|ref|ZP_03701363.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004943|gb|EEG42898.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 878

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 17/183 (9%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFIL-----HKG 300
           PD  +  ++ P +  V G DIL F    W A ++ A      +K FS+ +        + 
Sbjct: 478 PDNEEINYYYPTNDLVTGPDILFF----WVARMVVAGYEFRGEKPFSNVYFTGLVRDAQR 533

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN  D +++IE+ G D +R  L+   A G D  +D+   ++  N   AN I N
Sbjct: 534 RKMSKSLGNSPDALKLIEDYGADGVRVGLLLSSAAGNDLMFDEALCQQGKN--FANKIWN 591

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
                 S  + D    IP P A  ++ E   ++ ++ + EI ++     I  AL     L
Sbjct: 592 GFRLIQSWEVAD----IPQPEAAKKAIEWYTALFNKTVLEIEDDFSKYRISDALMATYKL 647

Query: 421 VSE 423
           + E
Sbjct: 648 LWE 650


>gi|239622594|ref|ZP_04665625.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239514591|gb|EEQ54458.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 911

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 519 IMDTWATSSLTPQIVTHWAEPDEASKALFASTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 578

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 579 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 634

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 635 ATYDIGQMKIGRRLAIKLLNA 655



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 44  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 103

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEK---RHHDT 105
             QN  GV   V +  +  +F+           D  D + IS  +FI   E+   +    
Sbjct: 104 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKL 162

Query: 106 CRILWKKIS 114
              LW+K+ 
Sbjct: 163 FEALWRKLG 171


>gi|115454745|ref|NP_001050973.1| Os03g0694900 [Oryza sativa Japonica Group]
 gi|28273401|gb|AAO38487.1| putative valyl tRNA synthetase [Oryza sativa Japonica Group]
 gi|37700350|gb|AAR00640.1| putative valyl tRNA synthetase [Oryza sativa Japonica Group]
 gi|108710540|gb|ABF98335.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108710541|gb|ABF98336.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549444|dbj|BAF12887.1| Os03g0694900 [Oryza sativa Japonica Group]
          Length = 1054

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 24/161 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +    LT  G+ D+    KA F+P  +   G DI+ F    W A +   
Sbjct: 569 DPD-VLDTWFSSGLFPLTVLGWPDDTADLKA-FYPGSVLETGHDIIFF----WVARMVMM 622

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L  ++P  +KV+ H  I    G K+SKSLGNVIDP++VI  + +D L   L      
Sbjct: 623 GMQLGGDVPF-EKVYLHPMIRDAHGRKMSKSLGNVIDPVDVINGISLDGLLKRL------ 675

Query: 336 GKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMILKDY 373
            K+G  D + L         D  +GI    + ++   L  Y
Sbjct: 676 -KEGNLDPNELNIATEGKKKDFPDGIAECGTDALRFALVSY 715



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 140 HIGHALTVAIEDSMIRWRRMSGYNTLWVPGVD-----------HAGIATQVVVEKKLMRE 188

Query: 81  RDMADVLDISYDDFI 95
           R++    DI  ++F+
Sbjct: 189 RNLTR-HDIGREEFV 202


>gi|82750799|ref|YP_416540.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754638|sp|Q2YXH4|SYI_STAAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|82656330|emb|CAI80746.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 917

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|50289171|ref|XP_447015.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526324|emb|CAG59948.1| unnamed protein product [Candida glabrata]
          Length = 907

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 1   MKEREK--LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +KE +K  +YI +   YP+   H+GH    +I+D L RF++  G +V+   G D  G   
Sbjct: 62  IKENDKRDMYILSMFPYPSGMLHMGHLRVYVISDTLNRFYQQRGYNVIHPMGWDAFGLPA 121

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRD-MADVL-DISYDDFIRTTEKRHHDTCRILWKKISDK 116
             AA   G+    +  QN +  ++ M D+L + +++  + T +  ++   + L+ ++   
Sbjct: 122 ENAAIERGIDPSEWTKQNIKKMKEQMNDMLANFNWEREVTTCDPEYYKFTQWLFLQLYKN 181

Query: 117 GDIYK 121
           G  Y+
Sbjct: 182 GLAYR 186


>gi|49483356|ref|YP_040580.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257427907|ref|ZP_05604305.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430540|ref|ZP_05606922.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433301|ref|ZP_05609659.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436143|ref|ZP_05612190.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903745|ref|ZP_06311633.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905509|ref|ZP_06313364.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282910766|ref|ZP_06318569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913969|ref|ZP_06321756.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918891|ref|ZP_06326626.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924014|ref|ZP_06331690.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957935|ref|ZP_06375386.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501002|ref|ZP_06666853.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509960|ref|ZP_06668669.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526549|ref|ZP_06671234.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427679|ref|ZP_06820311.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|1174521|sp|P41972|SYI1_STAAU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81651290|sp|Q6GHP2|SYI_STAAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|437916|emb|CAA52296.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|49241485|emb|CAG40171.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257274748|gb|EEV06235.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278668|gb|EEV09287.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281394|gb|EEV11531.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284425|gb|EEV14545.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313986|gb|EFB44378.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316701|gb|EFB47075.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322037|gb|EFB52361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325371|gb|EFB55680.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282330801|gb|EFB60315.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595363|gb|EFC00327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790084|gb|EFC28901.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920621|gb|EFD97684.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096007|gb|EFE26268.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467410|gb|EFF09927.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128037|gb|EFG57671.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315194079|gb|EFU24472.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 917

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|18309652|ref|NP_561586.1| leucyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|32171575|sp|Q8XML8|SYL_CLOPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|18144329|dbj|BAB80376.1| leucine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 816

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 17/184 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
           KG  Y+      +    +    +++V  GA  +      + +  QW      FF+++ Y 
Sbjct: 145 KGLAYRKKAPVNWCPSCQTVLANEQVVDGACERCSTEVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|294842774|ref|ZP_06787457.1| isoleucyl-tRNA synthetase [Acinetobacter sp. 6014059]
 gi|322506232|gb|ADX01686.1| Isoleucyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
          Length = 945

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +   G K+SKSLGN I  
Sbjct: 567 PADLYLEGSDQHRGWFQSSLLTSMAIHNRAPY-KALLTHGFTVDENGRKLSKSLGNYIPL 625

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            E+I+++G D LR ++       EIA  K+ F       +R+              ++  
Sbjct: 626 EEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRVSDSYRRIR------------NTLRF 673

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +L + +G  P+  A    D  ++++   +LQ   E  Q 
Sbjct: 674 LLANLNGFKPSTDALAVDD--LIALDQYILQRANEVQQT 710



 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +  G   KV    ++  FR       +   D  RT  KR
Sbjct: 117 EKVG---KVGEKVDAATFRKHCREYALKQIDLQRTDFKR 152


>gi|259417508|ref|ZP_05741427.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346414|gb|EEW58228.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 881

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
            +G   K +   N     +    L +S D      T +  ++   + L+    +KG +Y 
Sbjct: 91  ASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  +      N+  E  +G        +    QW      FF++S Y D+LL
Sbjct: 151 KNAVVNWDPVDMTVLANEQVEAGRGWRSGALVERRELTQW------FFKISDYSDELL 202



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 29/173 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 652 KMSKSKNNVVDPLAIISTYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 709

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M           P A  E DE +L    + ++++   +++   + A+A++    
Sbjct: 710 CDRIGEM----------DPDAKGEGDEDLLREMHKAIRDVTLGVESFGFNAAIAKLYGFT 759

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +                +AS    V  + I+ LA L+    P L+  I+
Sbjct: 760 NTLSK---------------SKASAA--VQKQAIKTLAQLMSPMTPHLSEDIW 795


>gi|241563392|ref|XP_002401685.1| isoleucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501877|gb|EEC11371.1| isoleucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 1060

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 53/229 (23%)

Query: 290 VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-- 345
              HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG  
Sbjct: 600 CICHGVILDATGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKM 659

Query: 346 ------------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                                  NAD   G  N  S +V                    D
Sbjct: 660 VFDTLRLFIKPIWNAYHFFTMYANADSLKGELNFASENV-------------------LD 700

Query: 388 ESILSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDR 443
             ILS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   
Sbjct: 701 VYILSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKSEKDTDKQN 760

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           A   LY  +E    +AI + A VP ++  I+  L       C  +L  R
Sbjct: 761 AYNALYSCLET---MAIAMSALVPIISEAIYKGL-----RHCEDTLSSR 801


>gi|189347262|ref|YP_001943791.1| isoleucyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341409|gb|ACD90812.1| isoleucyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 1084

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 13/138 (9%)

Query: 203 GLKDLSLSRKTFDW------GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKF 255
           GL DL L +   D       G +    P+ ++ VW D+ +       Y  +N D  +  F
Sbjct: 519 GLVDLDLHKPFVDRIYFIREGRRFNRTPE-LVDVWFDSGSMPFAQLHYPFENRDVFEKTF 577

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
            PAD    G D  R  F+ ++  A L+   +   K +  +G IL + G+K+SKS GNV+D
Sbjct: 578 -PADFIAEGVDQTRGWFYTMHAIATLIFDTVAY-KNLIVNGHILDREGQKMSKSKGNVVD 635

Query: 313 PIEVIEEVGVDALRYFLV 330
           P E ++  G DALR++L+
Sbjct: 636 PFETMQRYGADALRWYLL 653


>gi|327483482|gb|AEA77889.1| Isoleucyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|253733568|ref|ZP_04867733.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304381246|ref|ZP_07363899.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|253728438|gb|EES97167.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340229|gb|EFM06170.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140992|gb|EFW32839.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 920

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 469 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 528

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 529 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 581

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 582 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 625



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 48  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 108 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 164

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 165 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 201


>gi|224007929|ref|XP_002292924.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220971786|gb|EED90120.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1056

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 25/240 (10%)

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
           P  +K KF   +PAD    G D  R    ++   +LS  L   P  K +  +G +L   G
Sbjct: 556 PFENKEKFENGFPADFIAEGLDQTR--GWFYTLMVLSTALFDKPAFKNLIVNGLVLASDG 613

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLAN 356
           +K+SK L N  DP  VI + G DALR +L+       +    ++    G+ K V   L N
Sbjct: 614 KKMSKRLKNYPDPNVVISKYGADALRMYLINSPVVRAESLKFQESGVLGVVKEVFLPLYN 673

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
                V  +     K+    +P+          +D  I +    +++ + E M    ++ 
Sbjct: 674 AFRFFVQNTERWEAKNGSKFVPSKEKVQSTANPTDVWISAATQGLIKFVHEEMAAYRLYT 733

Query: 413 ALAQVISLVSEVDRYF-----DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            +  ++S V+++  ++     D  K  E  ++  +    VLY   +V+  + IL+  F P
Sbjct: 734 VMPALVSFVTQLTNWYVRLNRDRLKGLEGGESESETGLQVLY---DVLLDVTILMAPFTP 790


>gi|153829358|ref|ZP_01982025.1| isoleucyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229525334|ref|ZP_04414739.1| isoleucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|148875141|gb|EDL73276.1| isoleucyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229338915|gb|EEO03932.1| isoleucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|89055958|ref|YP_511409.1| isoleucyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88865507|gb|ABD56384.1| Isoleucyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 992

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       D  DG++     AD+++ G D  R  FH+    +       
Sbjct: 599 ILDVWFDSGSTHAFV--LRDREDGTEDGI--ADVYMEGTDQHRGWFHSSLLQSVGTQGRA 654

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKS+GN I P EVI++ G D LR ++ +
Sbjct: 655 PY-RNVVTHGFTLDEKGLKMSKSIGNTIVPEEVIKQYGADILRLWVAQ 701



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           RE   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I     
Sbjct: 63  REPFTLHDGPPYANGHLHIGHALNKTIKDIIVRSHQMMGRDARYIPGWDCHGLPIEWKIE 122

Query: 60  ----KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               K  +N      V   Q  R F +    +DI  D+F R
Sbjct: 123 EQYRKKGKNKDDVDIVDFRQECRKFAEH--WVDIQRDEFKR 161


>gi|50553903|ref|XP_504360.1| YALI0E24607p [Yarrowia lipolytica]
 gi|49650229|emb|CAG79959.1| YALI0E24607p [Yarrowia lipolytica]
          Length = 1095

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 27/166 (16%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P D+ V GKD++  H  ++  +  +A  P    PK + ++G +L   EK+SKS GN +
Sbjct: 682 FYPVDIRVSGKDLIPNHLTFF-IYCHTAMFPKRVWPKGIRANGHLLLNHEKMSKSTGNFM 740

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              +++E+ G DA R  L    A   D F D        N D AN    ++       LK
Sbjct: 741 TLKQIVEKFGADASRIAL----ADAGDTFED-------ANFDEANANAAILRL---YTLK 786

Query: 372 DY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           ++ + M+         D S+ +  +  L +  EN  N LI  A A 
Sbjct: 787 EWAEEMV--------KDTSLRTDGNNFLDQTFENEMNMLIEEAAAH 824


>gi|297580806|ref|ZP_06942732.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535222|gb|EFH74057.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 949

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|307069628|ref|YP_003878105.1| putative leucyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482888|gb|ADM89759.1| putative leucyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 807

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y  + I YP+ + HIGH    II D+L R++ +   + L     D  G     AA N  +
Sbjct: 33  YTCSMIPYPSGKLHIGHLRNYIINDILFRYYNMKKYNTLMFMSWDSFGLPAENAAINYNI 92

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           T   ++ +N +  +      D+S         K+   TC+
Sbjct: 93  TPYKWIKKNIKYMKKQILNFDLS------INWKKEFSTCK 126


>gi|296242288|ref|YP_003649775.1| Isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094872|gb|ADG90823.1| Isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 1057

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 31/275 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    +M VW D+   +    G+   P          D    G D +R  F ++   
Sbjct: 520 RVPD----VMDVWFDSGVCFYAAKGH---PKKLSLDDIILDFIAEGHDQIRGWFFSLL-R 571

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A +L  +L   K V  HGF+L  +G ++ KSLGN +   E I + G D LR +L+     
Sbjct: 572 AGVLGFDLAPYKNVLVHGFMLDEQGREMHKSLGNYVGTDEAIAKAGRDPLRLWLLSNTTW 631

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDE 388
               F  K    + V  DL+      V     M+L   DG  P      +        D+
Sbjct: 632 EDAKFSWKS--IEEVARDLSIAWNVFVFAKTYMVL---DGFKPEQYTLEDLMDSLRLEDK 686

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRA 444
            ILS  + ++Q+I   + N  +H A+  +   + E     Y    +P  W  + T    A
Sbjct: 687 WILSRTNTLIQKITHLLDNYEVHTAVRMLREFIVEDLSHWYIRLIRPRVWIEENTRDKLA 746

Query: 445 S-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + TVLY    V+ +L  +L  F P +   I+  +F
Sbjct: 747 AYTVLYY---VLDRLVRMLSPFTPFITEYIYQAMF 778



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 20  PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFVDQNSR 78
           PHIG A+   + D + R+ R+ G  V    G D HG  I  K  Q  GV  K  +++   
Sbjct: 59  PHIGTAWNKSLKDAILRYKRMQGYKVYDQPGYDCHGLPIEVKVEQKLGVRFKKEIEEKIG 118

Query: 79  NFRDMADVLDISYDD 93
             R +A+   ++ D+
Sbjct: 119 IDRFIAECRRLALDN 133


>gi|294848186|ref|ZP_06788933.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294824986|gb|EFG41408.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
          Length = 917

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|326318117|ref|YP_004235789.1| isoleucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374953|gb|ADX47222.1| isoleucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 959

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 14/158 (8%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP     +E  ++  + V++G  + + SR T +  +   D P Y     I+ VW D+ 
Sbjct: 519 ELHPR---TMEIMDQAAAIVEAGGIE-AWSRVTVEEILGAEDAPHYTKSTDILEVWFDSG 574

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSH 293
           + +        +P+        ADL++ G D  R  FH+    A  L    P  K + +H
Sbjct: 575 STFFHVL-RGTHPEVHHDSGPEADLYLEGHDQHRGWFHSSLLLASALYGRAPY-KGLLTH 632

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GF +  +G K+SKSLGN IDP E+ +++G + +R ++ 
Sbjct: 633 GFTVDSQGRKMSKSLGNGIDPQEINKKLGAEIIRLWVA 670



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +     Y N Q H+GHA   I+ D++ +  +L+G D L+  G D HG  I  A
Sbjct: 63  KFILHDGPPYANGQIHMGHAVNKILKDMITKARQLEGFDALYVPGWDCHGLPIENA 118


>gi|270296139|ref|ZP_06202339.1| valyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270273543|gb|EFA19405.1| valyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 877

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 32/247 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D D L ++   +  N
Sbjct: 529 DKLGRKMSKSLGNSPDPLDLIEKYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFNN 586

Query: 357 GIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N        ++K ++    +P P A   +     +  + V  E+ +      +  AL
Sbjct: 587 KIWNAFR-----LIKGWEVSAEVPVPEASELAIRWFEAKQNEVAAEVADLFSKYRLSEAL 641

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P         V   T+     L  LL  F+P + 
Sbjct: 642 MAVYKL------FWDEFSSWYLEMIKPAYGQPINRKVYEATIGFFDNLLHLLHPFMPFIT 695

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 696 EELWQHL 702


>gi|229512427|ref|ZP_04401901.1| isoleucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350577|gb|EEO15523.1| isoleucyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 949

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|225010154|ref|ZP_03700626.1| leucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005633|gb|EEG43583.1| leucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 180

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           E+ K Y+     YP+ A  H+GH    I +D+ ARF R  G +VL   G D  G    Q 
Sbjct: 29  EKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARFKRHKGFNVLHPMGYDSFGLPAEQY 88

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             +  Q+  +TT+  +D+    +R+  D +  S+D
Sbjct: 89  AIQTGQHPAITTQANIDR----YREQLDKIGFSFD 119


>gi|221640308|ref|YP_002526570.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782511|sp|B9KMH8|SYL_RHOSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221161089|gb|ACM02069.1| Leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 847

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 10/183 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N  + R     L +S D   +F  T +  ++   + ++  + + G +Y
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQAMFIDMMEAGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W  +      N+  +    DG+ + +   PV   E   +FFR+S Y  +LL  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSG-APVVRRELTQWFFRISDYAGELLEA 204

Query: 180 YES 182
            ++
Sbjct: 205 LDT 207



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 32/201 (15%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I + G D  R+F++ +    +D  +   G +              
Sbjct: 619 KMSKSKKNVVDPMNIIRQFGADTARWFVMSDSPPERDVEWTASGAEA------------- 665

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            S+ +  + +  D +    G     D ++    +R + E+ + ++    ++A+A++    
Sbjct: 666 ASKHLHRVWRLADEISRADGEANAEDGALDKATARAIAEVTQGVEGFAFNKAIAKLYEFT 725

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + + R        E KK                +R +A L+   VP LA +++ +L    
Sbjct: 726 NTLSRSGAGA---EAKK--------------RAMRTMAQLMSPMVPHLAEEVWAML--GG 766

Query: 482 ENRCFQSLDQRLKPGFMLHKT 502
           E    Q+   +  P  ++  T
Sbjct: 767 EGLVAQAAWPKADPALLIDDT 787


>gi|254477744|ref|ZP_05091130.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031987|gb|EEB72822.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 853

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKLSTGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
             +G   K +  +N  + R     L +S D   +F  T +  ++   + L+    +KG +
Sbjct: 90  MASGGHPKDWTYKNIADMRGQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLEKGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  + D     +++V  G  G    A    V+  E   +FF++S Y ++LL 
Sbjct: 149 YRKNAVVNWDPV-DMTVLANEQVENGR-GWRSGAL---VERRELTQWFFKISDYSEELLD 203

Query: 179 YYES 182
             +S
Sbjct: 204 ALDS 207



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 29/173 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+++I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 624 KMSKSKNNVVDPLQIISSYGADTARWFVLSDSPPERDVEWTAAGAE--AAHKHLNRVWNL 681

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  SM           P A    D+ +L    + ++++  +++    + A+A++    
Sbjct: 682 CDKIASM----------EPDATGSGDDELLREMHKAIRDVTLSIETFGFNAAIAKLYGFT 731

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +                +A T      + I  LA L+    P LA  I+
Sbjct: 732 NTLAK---------------SKAGTA--AQKQAIMTLAQLMSPMTPHLAEDIW 767


>gi|163745430|ref|ZP_02152790.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161382248|gb|EDQ06657.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 848

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 8/183 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    +     L +S D    I T    ++   + L+    +KG +Y
Sbjct: 90  MAIGGHPADWTYANIAEMKKQMKPLGLSIDWSREIATCHPGYYGQQQALFLDFLEKGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K     W  + D     +++V  G   +       PV+  E   +FF++S + ++LLS 
Sbjct: 150 RKNAVVNWDPV-DMTVLANEQVENGCGWR----SGAPVERRELTQWFFKISDHSEELLSA 204

Query: 180 YES 182
            +S
Sbjct: 205 LDS 207


>gi|15487676|gb|AAD38353.3| valyl tRNA synthetase [Cryptosporidium parvum]
          Length = 1050

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 253 AKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGN 309
           + F+P  L   G DIL F    +   +F  +  LP  K ++ H  +   +G K+SKSLGN
Sbjct: 569 STFFPTTLLETGSDILFFWVARMVMLSFACTDKLPF-KTIYLHAMVRDSQGRKMSKSLGN 627

Query: 310 VIDPIEVIEEVGVDAL 325
           VIDPIE+IE +  D L
Sbjct: 628 VIDPIEIIEGISFDDL 643


>gi|23335631|ref|ZP_00120865.1| COG0525: Valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189440059|ref|YP_001955140.1| valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|254783551|sp|B3DU23|SYV_BIFLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189428494|gb|ACD98642.1| Valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 911

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 519 IMDTWATSSLTPQIVTHWAEPDEASKALFASTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 578

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 579 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 634

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 635 ATYDIGQMKIGRRLAIKLLNA 655



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 44  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 103

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEK---RHHDT 105
             QN  GV   V +  +  +F+           D  D + IS  +FI   E+   +    
Sbjct: 104 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKL 162

Query: 106 CRILWKKIS 114
              LW+K+ 
Sbjct: 163 FEALWRKLG 171


>gi|15924183|ref|NP_371717.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926776|ref|NP_374309.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651763|ref|YP_186069.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161418|ref|YP_493784.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194899|ref|YP_499699.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148267685|ref|YP_001246628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393743|ref|YP_001316418.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221315|ref|YP_001332137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979514|ref|YP_001441773.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509367|ref|YP_001575026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253314953|ref|ZP_04838166.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731812|ref|ZP_04865977.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005980|ref|ZP_05144581.2| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795751|ref|ZP_05644730.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415975|ref|ZP_05682245.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258419722|ref|ZP_05682689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438764|ref|ZP_05689917.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444530|ref|ZP_05692859.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447637|ref|ZP_05695781.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449479|ref|ZP_05697582.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451891|ref|ZP_05699912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454858|ref|ZP_05702822.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048766|ref|ZP_06021648.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051692|ref|ZP_06023911.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202808|ref|YP_003282077.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892679|ref|ZP_06300914.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282919974|ref|ZP_06327703.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929238|ref|ZP_06336813.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024117|ref|ZP_06378515.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|295407131|ref|ZP_06816932.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276131|ref|ZP_06858638.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245983|ref|ZP_06929842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039673|sp|P67509|SYI_STAAN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|54042036|sp|P67508|SYI_STAAM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81859601|sp|Q5HGN8|SYI_STAAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123407059|sp|Q2FZ82|SYI_STAA8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123749624|sp|Q2FHP4|SYI_STAA3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166229773|sp|A7X1D8|SYI_STAA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|172048846|sp|A6QG93|SYI_STAAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189082335|sp|A6U113|SYI_STAA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189082336|sp|A5IS79|SYI_STAA9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189082337|sp|A8Z3N1|SYI_STAAT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13700992|dbj|BAB42288.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246963|dbj|BAB57355.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285949|gb|AAW38043.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127392|gb|ABD21906.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202457|gb|ABD30267.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740754|gb|ABQ49052.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946195|gb|ABR52131.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374115|dbj|BAF67375.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156721649|dbj|BAF78066.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368176|gb|ABX29147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724462|gb|EES93191.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257789723|gb|EEV28063.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839311|gb|EEV63785.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257844307|gb|EEV68689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848023|gb|EEV72016.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850023|gb|EEV73976.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853828|gb|EEV76787.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857467|gb|EEV80365.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860499|gb|EEV83326.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863241|gb|EEV86005.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160427|gb|EEW45452.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163222|gb|EEW47782.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075098|gb|ACY11071.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589197|gb|EFB94294.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594690|gb|EFB99674.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764676|gb|EFC04801.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816875|gb|ADC37362.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967984|gb|EFG44012.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297177147|gb|EFH36401.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315130984|gb|EFT86968.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196923|gb|EFU27266.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320143048|gb|EFW34838.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313861|gb|AEB88274.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329725029|gb|EGG61525.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727539|gb|EGG63995.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 917

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|331006482|ref|ZP_08329783.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419707|gb|EGG94072.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 943

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K+V +HGF +   G+K+SKS+GNVI P
Sbjct: 555 PADLYLEGSDQHRGWFQSSLKTSMTINGEPPY-KQVLTHGFTVDANGKKMSKSVGNVIPP 613

Query: 314 IEVIEEVGVDALRYFL 329
            +V+ ++G D LR ++
Sbjct: 614 QKVMNDLGADVLRLWV 629



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+   +     Y N   HIGHA   II DV+ +   + G D  +  G D HG        
Sbjct: 48  RKSFVLHDGPPYANGNIHIGHAVNKIIKDVIVKSKTMSGFDAPYVPGWDCHGLPIEHNVE 107

Query: 56  QKIAKAAQNAGVTT 69
           +K+ KA     V T
Sbjct: 108 KKVGKAGHKVDVKT 121


>gi|323484490|ref|ZP_08089856.1| hypothetical protein HMPREF9474_01607 [Clostridium symbiosum
           WAL-14163]
 gi|323692551|ref|ZP_08106784.1| leucine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323402268|gb|EGA94600.1| hypothetical protein HMPREF9474_01607 [Clostridium symbiosum
           WAL-14163]
 gi|323503417|gb|EGB19246.1| leucine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 803

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 42/237 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLL---SANLPLP-KKVFSHGFILHK-GEKISK 305
           K+ P D+++ G +    H +Y   +  FL    + +   P KK+F+ G I  K G K+SK
Sbjct: 523 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFKKLFNQGMITGKNGIKMSK 582

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P +++ + G D+LR + +       D  +D  G++         G+   ++R 
Sbjct: 583 SKGNVVSPDDLVRDYGCDSLRLYELFVGPPELDAEWDDRGIE---------GVSRFLNRF 633

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV- 424
            ++++ + D  +       E+ + ++ +  +++ +I +  +      +L  VIS   E  
Sbjct: 634 YNLVMDNKDKEV-------EATKEMIKIRHKLVFDIEQRFE----QFSLNTVISGFMEYN 682

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++  D  K    K+   DR         E +R   +LL  F P L  +++  L   D
Sbjct: 683 NKLIDLAK----KEGGIDR---------ETLRTFTVLLAPFAPHLGEELWQALGGTD 726



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLKGKYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNF-RDMADVLDI-SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +   +N +N  R + ++  I  +D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAISTAENVKNIKRQIGEIAAIYDWDMEVNTTDPGFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+  +   +    +    ++EV  G   +      + N  QWM       +++AY ++LL
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVNGCCERCGTTVTKKNLRQWM------LKITAYAERLL 201

Query: 178 S 178
           +
Sbjct: 202 N 202


>gi|307730763|ref|YP_003907987.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585298|gb|ADN58696.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A +L    P    + +HGF +  +G K+SKSLGN IDP
Sbjct: 575 PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY-NALLTHGFTVDGEGRKMSKSLGNGIDP 633

Query: 314 IEVIEEVGVDALRYFLV 330
            EV   +G + +R ++ 
Sbjct: 634 HEVANRLGAEIIRLWIA 650



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R+K  +     Y N   H+GHA   I+ D++ +   + G D ++  G D HG  I
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNMAGFDAVYVPGWDCHGMPI 110


>gi|282881584|ref|ZP_06290253.1| isoleucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304570|gb|EFA96661.1| isoleucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 1226

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 32/240 (13%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK LGNV 
Sbjct: 730 FFPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHLGNVK 788

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRSVSM 368
           +P ++IE  G DA+R++++   +   +  +D++G   ++++    L N      + S   
Sbjct: 789 NPFDMIERYGADAVRFYMMTNSSPWDNLKFDEEGVDEVRRKFFGTLYN------TYSFFA 842

Query: 369 ILKDYDGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  + D   PT G F         E D  I+S    +++ + +++ N    RA   + + 
Sbjct: 843 LYANVDDFQPT-GCFDKTKLKDAPEIDRWIISKLHSLIKGVEDDLNNFDPTRAGRLIDTF 901

Query: 421 VS-EVDRYF---DAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V+ ++  ++   + ++ W  K+ + D+ S    LY  +  I +LA     F+P  A++++
Sbjct: 902 VNDDLSNWYVRLNRKRFWG-KEMSEDKLSAYNTLYECLLTISKLA---APFIPFFADQLY 957


>gi|297591363|ref|ZP_06950001.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576249|gb|EFH94965.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438430|gb|ADQ77501.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 920

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 469 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 528

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 529 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 581

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 582 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 625



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 48  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 108 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 164

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 165 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 201


>gi|154251733|ref|YP_001412557.1| leucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|189030295|sp|A7HSL7|SYL_PARL1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154155683|gb|ABS62900.1| leucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 870

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 26/186 (13%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           I+   EK+SKS  N +DP ++I + G D  R+F++ +    +D  +   G         A
Sbjct: 624 IIGSVEKMSKSKKNTVDPEDIIAKYGADTARWFMLSDSPPERDVQWTDQG---------A 674

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            G      R   M+ +  + + PT    P AF+E + ++     + L    E+ +N   +
Sbjct: 675 EGAWRFTQRLWRMVTERQEDLAPTGTPMPTAFSEDELTLRRAAHQALAAATEDFENLRFN 734

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           RA+A+V  L + V  +             P+ A    +   E +  L  ++   +P +A 
Sbjct: 735 RAVARVYELANAVSGF---------TPGTPEGA----FAKREALEILVQIVGPMMPHIAE 781

Query: 472 KIFDIL 477
           + ++ L
Sbjct: 782 ECWEAL 787



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ +  G +VL   G D  G     AA 
Sbjct: 33  KPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKKARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N    R+    + ++ D
Sbjct: 93  EKNVHPKGWTYDNIAAMREQLKAIGLAID 121


>gi|148251789|ref|YP_001236374.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166230612|sp|A5E8H4|SYL_BRASB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146403962|gb|ABQ32468.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 874

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DVLARF R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHVRNYTLGDVLARFMRAKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N    +     + +S D
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLRSIGLSLD 121



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 14/177 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++IE  G D  R+F++ +    +D  +  + ++    A     +  
Sbjct: 629 EKMSKSKKNTVDPDDIIESYGADVARWFMLSDSPPDRDVIWSDERVQG--AARFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ SV+      +     P  F     ++       L ++   ++    +  LA +   
Sbjct: 687 LVNESVA---AGQEAPSSRPATFGPDALALRKAAHGALDKVTGGIERLHFNVCLAHIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +       +P    K  PD A    +   E  + L  L    +P LA + + +L
Sbjct: 744 ANALAEVL--ARP---AKPAPDLA----WAIREAAQILVQLFSPMMPHLAEECWQVL 791


>gi|313141807|ref|ZP_07804000.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130838|gb|EFR48455.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 813

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I+D +AR  R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGNIHMGHVRNYCISDAIARNLRKQGYNVLHPIGWDAFGMPAENAAIKN 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY-KG 122
               K +   N  + +     L  S+     + T +  +    ++L+ ++ +KG IY K 
Sbjct: 93  KTHPKQWTYSNIEHMKKQLYSLGFSFSKTRELATCDLEYSKWEQLLFIEMWEKGLIYRKK 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y  W    D+    +++V    +G+ +      +Q  E   Y+ +++ Y ++LL   ES
Sbjct: 153 GYLNWCP-NDQTVLANEQV---IEGKCWRCDTQVIQ-KEMYQYYIKITDYAEELLQDLES 207

Query: 183 ----HPEFILPIER 192
                P  +L ++R
Sbjct: 208 LEGKWPNQVLTMQR 221



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------VREIACGKDGFYDK 343
           + + G +  +G K+SKS GNV+DP E+I   G D  R F+      VRE+          
Sbjct: 568 LLTQGMVTKEGAKMSKSKGNVVDPQEIINTYGADTARLFILFAAPPVRELEWNDSALEGS 627

Query: 344 DGLKKRVNADLAN 356
               KR+ A + N
Sbjct: 628 FRFIKRLCAKIEN 640


>gi|312829587|emb|CBX34429.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
          Length = 917

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|302545452|ref|ZP_07297794.1| leucine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463070|gb|EFL26163.1| leucine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 966

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K ++     YP+ A  H+GH    I  DV AR+HR+ G +VL T G D  G    + A
Sbjct: 59  RPKKFVMDMFPYPSGAGLHVGHPLGYIATDVYARYHRMTGHNVLHTLGFDAFGLPAEQYA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N R     L + +D
Sbjct: 119 VQTGTHPRVSTEANIDNMRRQLRRLGLGHD 148


>gi|298715272|emb|CBJ27921.1| Leucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 859

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K ++     YP+    H+GH      +DV+AR+ R+ G DVL   G D  G    + A
Sbjct: 47  RPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMARYWRMKGFDVLHPMGWDSFGLPAEQHA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   KV    N   FR    +L  SYD
Sbjct: 107 ILTGTHPKVTTYTNIDTFRRQLKMLGFSYD 136



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 92/229 (40%), Gaps = 45/229 (19%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFILHK-GEKISKSLG 308
           P DL+V G++    H +Y   W   L        P P +++   G IL   GEK+SKS G
Sbjct: 582 PVDLYVGGQEHAVLHLLYARFWHKVLHDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRG 641

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVI+P ++++  G DALR + +         F       K    +   G+     R   +
Sbjct: 642 NVINPDDIVDSDGADALRLYEM---------FMGPLEATKPWQTEQVAGVTRFRDRVYQL 692

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             +  + +   P          L++  + ++++ E++     + A++ ++ L + +  + 
Sbjct: 693 ARRGAEDVELAP--------ETLTILHKTMKKVSEDIDELAFNTAISALMVLTNHLMTF- 743

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       P R         E +  L  ++  F P L  + +D+L
Sbjct: 744 ----------EKPPR---------EALEALVRMVSPFAPHLGEECWDLL 773


>gi|298370336|ref|ZP_06981652.1| valine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281796|gb|EFI23285.1| valine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+ + V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSTVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|224418274|ref|ZP_03656280.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827598|ref|ZP_04870483.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511004|gb|EES89663.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 812

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I+D +AR  R  G +VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGNIHMGHVRNYCISDAIARNLRKQGYNVLHPIGWDAFGMPAENAAIKN 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIY-KG 122
               K +   N  + +     L  S+     + T +  +    ++L+ ++ +KG IY K 
Sbjct: 92  KTHPKQWTYSNIEHMKKQLYSLGFSFSKTRELATCDLEYSKWEQLLFIEMWEKGLIYRKK 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y  W    D+    +++V    +G+ +      +Q  E   Y+ +++ Y ++LL   ES
Sbjct: 152 GYLNWCP-NDQTVLANEQV---IEGKCWRCDTQVIQ-KEMYQYYIKITDYAEELLQDLES 206

Query: 183 ----HPEFILPIER 192
                P  +L ++R
Sbjct: 207 LEGKWPNQVLTMQR 220



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL------VREIACGKDGFYDK 343
           + + G +  +G K+SKS GNV+DP E+I   G D  R F+      VRE+          
Sbjct: 567 LLTQGMVTKEGAKMSKSKGNVVDPQEIINTYGADTARLFILFAAPPVRELEWNDSALEGS 626

Query: 344 DGLKKRVNADLAN 356
               KR+ A + N
Sbjct: 627 FRFIKRLCAKIEN 639


>gi|221140635|ref|ZP_03565128.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|302751016|gb|ADL65193.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 917

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|169344415|ref|ZP_02865384.1| leucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297335|gb|EDS79444.1| leucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 816

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 17/184 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
           KG  Y+      +    +    +++V  GA  +      + +  QW      FF+++ Y 
Sbjct: 145 KGLAYRKKAPVNWCPSCQTVLANEQVVDGACERCSTEVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202



 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|167630718|ref|YP_001681217.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687869|sp|B0TBJ3|SYL_HELMI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167593458|gb|ABZ85206.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 846

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 37/89 (41%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 32  RPKYYCLEMFPYPSGNLHMGHVRVYSIGDVVARFKTMQGYNVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V    +   N  N R     + ISYD
Sbjct: 92  KHKVPPADWTWSNIANMRRQLQSMGISYD 120



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/209 (17%), Positives = 82/209 (39%), Gaps = 37/209 (17%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + + + G +L  G K+SKS GN + P E+I + G D  R F++      +D  +   G++
Sbjct: 572 ENLLTQGMVLMGGSKMSKSKGNTVSPEEIIAKYGADTARLFILFAAPPERDLEWSDRGVE 631

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-------------------AFTESDE 388
                    G    + R   ++    D +   PG                   +    D 
Sbjct: 632 ---------GAHRFLHRLWRLVYAYSDQIASVPGTMVGYGKGQPNGSKGDNLFSLNSDDR 682

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            ++ V    ++++ E++  +         +S + E+  YF     ++ K   P     + 
Sbjct: 683 ELVRVAHYTVKKVTEDIGQRF---NFNTAVSAIMEMVNYF-----YQYKDKVPAEQQNIP 734

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V  + + +L ++L  F P +  +++ ++
Sbjct: 735 LVK-DALARLVLVLAPFAPHICEELWQVI 762


>gi|158289903|ref|XP_311528.4| AGAP010420-PA [Anopheles gambiae str. PEST]
 gi|157018382|gb|EAA07254.5| AGAP010420-PA [Anopheles gambiae str. PEST]
          Length = 1052

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 13/123 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +  G+ DN D  K  F+P  L   G DIL F     +++   LL   
Sbjct: 578 VLDTWFSSGLFPFSVFGWPDNTDDLKL-FYPTTLLETGHDILFFWVARMVFFGQTLL-GK 635

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACG 336
           LP  K+VF H  +    G K+SKSLGNVIDP++VI  + ++ L   L       REI   
Sbjct: 636 LPF-KEVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLEGLHKQLYDSNLDPREIEKA 694

Query: 337 KDG 339
           K G
Sbjct: 695 KAG 697


>gi|227545731|ref|ZP_03975780.1| valine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|312133397|ref|YP_004000736.1| vals [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482768|ref|ZP_07941780.1| anticodon-binding domain-containing protein [Bifidobacterium sp.
           12_1_47BFAA]
 gi|322688413|ref|YP_004208147.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322690432|ref|YP_004220002.1| valyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|90103528|sp|Q8G777|SYV_BIFLO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|227213847|gb|EEI81686.1| valine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291517529|emb|CBK71145.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
 gi|311772623|gb|ADQ02111.1| ValS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915803|gb|EFV37213.1| anticodon-binding domain-containing protein [Bifidobacterium sp.
           12_1_47BFAA]
 gi|320455288|dbj|BAJ65910.1| valyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320459749|dbj|BAJ70369.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 911

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 519 IMDTWATSSLTPQIVTHWAEPDEASKALFASTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 578

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 579 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 634

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 635 ATYDIGQMKIGRRLAIKLLNA 655



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 44  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 103

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEK---RHHDT 105
             QN  GV   V +  +  +F+           D  D + IS  +FI   E+   +    
Sbjct: 104 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKL 162

Query: 106 CRILWKKIS 114
              LW+K+ 
Sbjct: 163 FEALWRKLG 171


>gi|27375738|ref|NP_767267.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|32171529|sp|Q89WQ1|SYL_BRAJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27348876|dbj|BAC45892.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 874

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DVLARF R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHVRNYTLGDVLARFMRAKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N    +     + +S D
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLRSIGLSLD 121


>gi|83859979|ref|ZP_00953499.1| putative leucyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852338|gb|EAP90192.1| putative leucyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 898

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 7   LYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            Y+     YP+ A  H+GH    +  D++AR+ R+ G  VL   G D  G    + A   
Sbjct: 38  FYVLDMFPYPSGAGLHVGHPVGYLSTDIVARYKRMAGYKVLHPMGWDSFGLPAERYAMKT 97

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           GV  +V    N  N++   D+L + YD
Sbjct: 98  GVHPQVSTQDNIANYKRQMDLLGLGYD 124


>gi|327398468|ref|YP_004339337.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181097|gb|AEA33278.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 930

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPA +++ G D  R  FH+    +       P   +V +HGF++  KG K+SKSLGNVI 
Sbjct: 557 WPASMYLEGSDQHRGWFHSSLLESVGTRDRAPY-DEVLTHGFVVDSKGRKMSKSLGNVIQ 615

Query: 313 PIEVIEEVGVDALR 326
           P ++I++ G + LR
Sbjct: 616 PEKIIKKYGAELLR 629


>gi|320537970|ref|ZP_08037876.1| leucyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145176|gb|EFW36886.1| leucyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 861

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 25/201 (12%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+ +  H+GH       D+  R+ R++G +VL   G D  G      A 
Sbjct: 42  KRAYVLDMFPYPSGEGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGFDSFGLPAENYAI 101

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   KV  ++N  NFR        SY  D  I T+++ ++   + ++ ++  +G  Y+
Sbjct: 102 KTGTHPKVTTNKNIDNFRRQIKSFGFSYDWDREISTSDESYYHWTQWIFLQLYKRGLAYE 161

Query: 122 G------CYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
                  C S    L +E      EV  G   +      + N  QW+       R++AY 
Sbjct: 162 AETPINWCPSCLTGLANE------EVKDGHCDRCGTQVVRKNIRQWI------LRITAYA 209

Query: 174 DKLLSYYES--HPEFILPIER 192
           ++LL   ES   P+ I  ++R
Sbjct: 210 ERLLEDLESLDWPDSIKQMQR 230


>gi|170693571|ref|ZP_02884729.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141353|gb|EDT09523.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    A +L    P    + +HGF +  +G K+SKSLGN IDP
Sbjct: 575 PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY-NALLTHGFTVDGEGRKMSKSLGNGIDP 633

Query: 314 IEVIEEVGVDALRYFLV 330
            EV   +G + +R ++ 
Sbjct: 634 HEVANRLGAEIIRLWIA 650



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R+K  +     Y N   H+GHA   I+ D++ +   + G D ++  G D HG  I
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNMAGFDAVYVPGWDCHGMPI 110


>gi|260061590|ref|YP_003194670.1| leucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785722|gb|EAR16891.1| leucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 6   KLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y  T   YP+ A  H+GH    I  D+ +RF R  G +VL   G D  G    + A  
Sbjct: 32  KFYALTMFPYPSGAGLHVGHPLGYIACDIYSRFKRHQGYNVLQPMGYDSFGLPAEQYAIQ 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
            G    +  + N   +R+  D L  SYD
Sbjct: 92  TGQHPAITTEANIARYREQLDALGFSYD 119


>gi|15640701|ref|NP_230331.1| isoleucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587755|ref|ZP_01677515.1| isoleucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153818724|ref|ZP_01971391.1| isoleucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227080863|ref|YP_002809414.1| isoleucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505697|ref|ZP_04395207.1| isoleucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229508729|ref|ZP_04398222.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519521|ref|ZP_04408964.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608716|ref|YP_002879364.1| isoleucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254851014|ref|ZP_05240364.1| isoleucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255743859|ref|ZP_05417815.1| isoleucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262156078|ref|ZP_06029197.1| isoleucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|81545342|sp|Q9KU47|SYI_VIBCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782452|sp|C3LST7|SYI_VIBCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|9655121|gb|AAF93847.1| isoleucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547982|gb|EAX58062.1| isoleucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510746|gb|EAZ73340.1| isoleucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227008751|gb|ACP04963.1| isoleucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344210|gb|EEO09185.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229354253|gb|EEO19183.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357920|gb|EEO22837.1| isoleucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371371|gb|ACQ61794.1| isoleucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846719|gb|EET25133.1| isoleucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738490|gb|EET93879.1| isoleucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030114|gb|EEY48759.1| isoleucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 949

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARQEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       D   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEDMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|330432294|gb|AEC17353.1| isoleucyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 939

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +   +     G+       D+++ G D  R    +  + 
Sbjct: 530 KVPD----TLDVWFDSGSTYSSVVKHRAEFGGNDV-----DMYLEGSDQHR--GWFMSSL 578

Query: 279 LLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 579 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASSDY 638

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 639 TGEIAVSDE--IFKRA-ADTYRRIRN----TARFLLANLNGFDPKRDMVQPEEMIVLDRW 691

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++   +   +I+E   N   H  + +++   S
Sbjct: 692 AVACALQAQNDIKEAYDNYQFHEVVQRLMRFCS 724


>gi|321251339|ref|XP_003192031.1| isoleucine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458499|gb|ADV20244.1| Isoleucine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1094

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 20/239 (8%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +PAD    G D  R  F+ +      L    P    + +   +   G+K+SK L N  
Sbjct: 565 KSYPADFISEGIDQTRGWFYTLLVLGTHLFETAPWKNLIVTGLVLAADGKKMSKKLKNYP 624

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           DP+EV+ + G D +R FLV       D   + ++G+++     L N I   ++ S++  L
Sbjct: 625 DPMEVVNKYGADCVRLFLVNSPVVRADNLRFREEGVREI----LTNVILKWIN-SLNFYL 679

Query: 371 KDYDGMIPTPG-----------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
              +    T G           +    D  IL+ C  ++Q +   M    ++  + +++ 
Sbjct: 680 GQVELFEQTTGEKFVYDHNAKKSTNVMDRWILATCQTLIQHVETEMAAYRLYTVIPKLLD 739

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+S++  ++       LK +   +     L    E +  L + + +F P     ++  L
Sbjct: 740 LISDLTNWYIRFNRTRLKGSGGVEDTRAALNTLYEALLTLCLTMSSFTPFTCETVYQAL 798


>gi|298252532|ref|ZP_06976326.1| leucyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532896|gb|EFH71780.1| leucyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 994

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 15/130 (11%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 66  RPSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH---DTCRILWKKISDKGDI 119
              G   ++  + N  N R     + +S+DD      +R     DT  + W +      I
Sbjct: 126 VQTGQHPRITTEANIANMRRQLHRMGLSFDD------RRSFATIDTNYVRWTQW-----I 174

Query: 120 YKGCYSGWYS 129
           +   Y  WY+
Sbjct: 175 FSKLYDAWYN 184


>gi|145506999|ref|XP_001439460.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406644|emb|CAK72063.1| unnamed protein product [Paramecium tetraurelia]
          Length = 513

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 17/226 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PAD    G D  R  F+ +   A  L  + P  K +  +G +L+ KGEK+SKS  N  D
Sbjct: 20  FPADFIAEGLDQTRGWFYTLNVIATALRDDTPY-KNLIVNGIVLNDKGEKMSKSKKNYPD 78

Query: 313 P-IEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK---KRVNADLANG----IGNLVS 363
           P IE+I + G DA+R +L+   +   +   + KDG++   K V     N     I NL  
Sbjct: 79  PEIEIINQFGADAMRLYLINSGLVKAQSLNFSKDGVQEVIKNVFLPWYNAYRFLIQNL-Q 137

Query: 364 RSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  S++ K ++D    T G  T  D+ I+S    +++ +R  M+   ++  + ++IS + 
Sbjct: 138 RYESVLGKFEFDENAITKGDNT-MDKWIVSSSQTLVEFVRNEMEAYRLYTIVPRLISYLD 196

Query: 423 EVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVP 467
            +  ++       +K    ++   V L V  +V+ ++ +L+  +VP
Sbjct: 197 TLTNWYVRLNRGRIKGDQGNQEWVVSLNVLFDVLLKITLLMSPYVP 242


>gi|157105567|ref|XP_001648925.1| valyl-trna synthetase [Aedes aegypti]
 gi|108880047|gb|EAT44272.1| valyl-trna synthetase [Aedes aegypti]
          Length = 1048

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 37/269 (13%)

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH--NPVQWMEE--EGYFFRLSAYQDKLLSYYES 182
           WY   DE   N  E  +  + +     H  N   WM+E  +G   R      ++ +Y  S
Sbjct: 465 WYVKCDEMAKNATEAVRSGELKSTPEVHKKNWYHWMDEIRDGCVSRQLWGGHRIPAYQAS 524

Query: 183 HPEFILPIER-------------RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
              F  P ++             R EV +  K+  K+L++S++     +K  +D   +  
Sbjct: 525 ---FKDPSQKPAGLDAESLWAVGRTEVEALEKAA-KELNVSKEAR--ALKQDED---VRD 575

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPL 286
            W  +     +  G+ DN    K  ++P  L   G DIL F     +++   LL   LP 
Sbjct: 576 TWFSSGLFPFSVVGWPDNTVDVKL-YYPTSLLETGHDILFFWVAGMVFFGQTLL-GKLPF 633

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K+VF H  +    G K+SKSLGNVIDP++VI  + +D L   L+      K+    K G
Sbjct: 634 -KEVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLDGLHLQLLDSNLDPKEIEKAKAG 692

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYD 374
            K+    D  NGI    + ++   L  Y+
Sbjct: 693 QKQ----DYPNGIPECGTDAMRFALCAYN 717


>gi|23464992|ref|NP_695595.1| valyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|23325592|gb|AAN24231.1| valyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 946

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 554 IMDTWATSSLTPQIVTHWAEPDEASKALFASTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 613

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 614 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 669

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 670 ATYDIGQMKIGRRLAIKLLNA 690



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 79  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 138

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEK---RHHDT 105
             QN  GV   V +  +  +F+           D  D + IS  +FI   E+   +    
Sbjct: 139 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKL 197

Query: 106 CRILWKKIS 114
              LW+K+ 
Sbjct: 198 FEALWRKLG 206


>gi|88802742|ref|ZP_01118269.1| putative valyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781600|gb|EAR12778.1| putative valyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 30/247 (12%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHKG 300
           NP+  + K++ P +  V G DIL F    W A ++ A          K V+  G +  K 
Sbjct: 478 NPENEEIKYYYPTNDLVTGPDILFF----WVARMIVAGYEYKGEKPFKNVYLTGLVRDKQ 533

Query: 301 E-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGN  D +++IE+ G D +R  L+   A G D  +++D  ++        G  
Sbjct: 534 RRKMSKSLGNSPDALKLIEDYGADGVRVGLLLSAAAGNDLMFEEDLCQQ------GKGFA 587

Query: 360 NLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           N +  +  +I   +    +P P           +   + L EI ++     +  AL  + 
Sbjct: 588 NKIWNAFRLITGWEVAATLPQPETSKIGLVWYEAKFQKTLAEIEDHFAKYRLSDALMAIY 647

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVIRQLAILLQAFVPKLANKIF 474
            L++      D    W L+   P     +   T    +EV+     +L  F+P L+  I+
Sbjct: 648 KLIN------DDFSSWLLEIVKPAYQQPIDKKTFDAILEVLENNLKVLHPFMPFLSEDIW 701

Query: 475 DILFVAD 481
              ++AD
Sbjct: 702 Q--YIAD 706


>gi|124486221|ref|YP_001030837.1| leucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|124363762|gb|ABN07570.1| leucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF 47
          ++KLY++ A  YP+   H+GH    II DV+ARF R+ G  VLF
Sbjct: 30 KDKLYVNVAFPYPSGAMHVGHGRTYIIPDVVARFWRMQGKQVLF 73


>gi|119946877|ref|YP_944557.1| isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166229761|sp|A1SZP3|SYI_PSYIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119865481|gb|ABM04958.1| Isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 944

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T + +     +       +   AD+++ G D  R  F +    +  ++   P  
Sbjct: 535 VWFDSGTTHASVVAKREEYTLESGEQAAADMYLEGSDQHRGWFQSSLMTSMAINNKAPY- 593

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G+K+SKSLGNV+ P  V+  +G D LR ++ 
Sbjct: 594 KEVLTHGFVVDGNGKKMSKSLGNVMSPQTVMNNLGADILRLWVA 637


>gi|117927979|ref|YP_872530.1| leucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|189082978|sp|A0LSY4|SYL_ACIC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117648442|gb|ABK52544.1| leucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 832

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 28/204 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+     YP+   H+GHA    I DV+AR+    G +VL   G D  G      A+
Sbjct: 48  RERRYMLDMFPYPSGDLHMGHAEAFAIGDVVARYWFQRGYNVLHPIGWDAFGLP----AE 103

Query: 64  NAGVTTKVF--------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
           NA +   +         ++  + +FR+ A   D S    + T +  ++   + L+ ++ +
Sbjct: 104 NAAIQRNLHPADWTYRNIETQAASFRNYAISFDWSRR--LHTCDPEYYKWTQWLFLRLFE 161

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAY 172
           +G  Y+      +   D+    +++V  G   +   AQ       QW      +FR++ Y
Sbjct: 162 RGLAYRKASPVNWCPNDQTVLANEQVV-GGTCERCGAQVTKKTLTQW------YFRITEY 214

Query: 173 QDKLL---SYYESH-PEFILPIER 192
             +LL   +  E   PE +L ++R
Sbjct: 215 AQRLLDDMALLEGRWPERVLTMQR 238



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 26/186 (13%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G ++++G+ +SKSLGN +D  E +   GVDA+R  +V      +D  +        
Sbjct: 586 LLNQGQVINQGKAMSKSLGNGVDLGEQLATYGVDAVRLTMVFAGPPEEDIDW-------- 637

Query: 350 VNADLANG-IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             AD+  G +G  ++R V  I  +    +  P    + D ++  V  R ++E+ E +++ 
Sbjct: 638 --ADMNPGALGKFLAR-VWRIAGEVTSPVGAPP--KDGDPALRRVTHRTIREVTELVESF 692

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A+V+ L + + +  D         T P  A   +    E    LA++L  F P 
Sbjct: 693 RFNVAVARVMELANALRKAID---------TGPGPADPAVREGAEA---LAVMLSLFAPY 740

Query: 469 LANKIF 474
            A + +
Sbjct: 741 TAEECW 746


>gi|298377524|ref|ZP_06987476.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265543|gb|EFI07204.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 1140

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++    ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 637 QIYPADFIAEGVDQTRGWFFTLHALGTMIFDSVAY-KAVVSNGLVLDKNGNKMSKRLGNA 695

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 696 VDPFSTIEKYGSDPLRWYMITNASPWDNIKFDIDGIEE 733


>gi|261749575|ref|YP_003257261.1| leucyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497668|gb|ACX84118.1| leucyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 941

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K YI     YP+    HIGH    I +D+ AR+ R  G +VLF  G D  G    + A  
Sbjct: 34  KYYILNMFPYPSGSGLHIGHCLGYIASDIYARYKRTTGHNVLFPIGFDSFGLPAEQYAIQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
            G        QN + ++   D + +S+D
Sbjct: 94  TGQHPFKTTRQNVKKYQSQMDKIGLSFD 121


>gi|126640613|ref|YP_001083597.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|126386497|gb|ABO10995.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 490

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA    V    +  
Sbjct: 4   YPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAAIAHKVAPAKWTF 63

Query: 75  QNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
           +N    RD    L +S D   +F   T + +H   + L+ ++  KG IY+   +  +   
Sbjct: 64  ENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWE-QWLFVQLYKKGLIYRKLSTVNWDPV 122

Query: 132 DEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           D+    +++V  G     G     +  P+       Y+FR++ Y
Sbjct: 123 DQTVLANEQVENGRGWRSGALVEKRDIPM-------YYFRITDY 159


>gi|296157165|ref|ZP_06840001.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295892501|gb|EFG72283.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDELQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 NALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      A+  Q A       +++    FR +  + D  +D+  +T    +     
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGD--WDNPYKTMNFTNEAGEI 171

Query: 108 ILWKKISDKGDIYKG 122
               KI +KG +++G
Sbjct: 172 RALAKIMEKGYVFRG 186


>gi|283470404|emb|CAQ49615.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 917

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|281202051|gb|EFA76256.1| valyl tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 1078

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 120/307 (39%), Gaps = 77/307 (25%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL----- 279
           ++  W  +     +T G+   P+ +K   +F+P  L   G DIL F    W A +     
Sbjct: 598 VLDTWFSSGLFPFSTLGW---PEQTKDFEQFFPTSLLETGLDILFF----WVARMVMMGQ 650

Query: 280 -LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV--------------------- 316
            L+  LP   ++F H  +    G K+SKSLGNVIDP++V                     
Sbjct: 651 QLTGKLPF-NQIFLHAMVRDSHGRKMSKSLGNVIDPLDVIRGITLKSLQDNLKAGNLDPV 709

Query: 317 ----------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                           I E G DA+R+ L    + G+D   + D L+        N I N
Sbjct: 710 EYEKASLGLKQDYPEGISECGTDAMRFALCAYTSQGRD--INLDILRVVGYRHFCNKIWN 767

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES----ILSVCSRVLQEIRENMQNQLIHRALAQ 416
             +R   M L DY  +   P    +   +    IL+  +R +Q+  E           AQ
Sbjct: 768 -ATRFAMMKLGDYKPIDFNPQELVKDTNAVNLWILNAANRAIQQCEEG----FAAYDFAQ 822

Query: 417 VISLVSE------VDRYFDAQKP-WELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVP 467
           V + +         D Y +  KP +    ++P    T   LY  +++  +   LL  F+P
Sbjct: 823 VTTAIYNFWLHDLCDFYLETTKPIFAEGDSSPATQKTKDTLYTCIDIGLK---LLHPFMP 879

Query: 468 KLANKIF 474
            L+ +++
Sbjct: 880 YLSEELY 886



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA  M I D + R+ R+ G   L+  GTD           +AG+ T+V V++  +  
Sbjct: 166 HLGHALTMAIQDSITRYRRMKGEVCLWIPGTD-----------HAGIATQVVVEKKLQRE 214

Query: 81  RDMADVLDISYDDFI 95
           R+++   D+  + FI
Sbjct: 215 RNVSR-HDLGREGFI 228


>gi|254526098|ref|ZP_05138150.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537522|gb|EEE39975.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 965

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 39/283 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++            S+ K+ PADL++ G D    H  ++ + LL++    N
Sbjct: 553 MDVWFDSGSSWAAVC-----EQRSELKY-PADLYLEGSDQ---HRGWFQSSLLTSVAVNN 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
            P  K+V +HGF L   G K+SKSLGNV+DP  +I            G D LR + V  +
Sbjct: 604 KPPYKRVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKSEPAYGADVLRLW-VSSV 662

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DE 388
               D     + LK+   +D+   + N  +R +   + DYD   P   +F        D+
Sbjct: 663 DYSVDVPIGSNILKQL--SDVYRKVRN-TARYLLGNIHDYD---PNIDSFEIDQLPLLDQ 716

Query: 389 SILSVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRAS 445
            +L     V  +I    ++    R   + Q   +V   + Y D A+    +   +  R  
Sbjct: 717 WMLGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSQFRRR 776

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQ 487
           +  +V  +V+  LA+L+   +  +A  I+ +I ++  E   FQ
Sbjct: 777 SCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYLTKEKSVFQ 819



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           Y N   H+GHA   ++ D++ ++  L G  V +  G D HG  I  K  QN
Sbjct: 69  YANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELKVLQN 119


>gi|209517453|ref|ZP_03266294.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502107|gb|EEA02122.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDELQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 NALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           + R K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  RGRTKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      A+  Q A       +++    FR +  + D  +D+  +T    +     
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKAGFRRLGVLGD--WDNPYKTMNFANEAGEI 171

Query: 108 ILWKKISDKGDIYKG 122
               KI +KG +++G
Sbjct: 172 RALAKIMEKGYVFRG 186


>gi|148653627|ref|YP_001280720.1| leucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|189083148|sp|A5WGH9|SYL_PSYWF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148572711|gb|ABQ94770.1| leucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 885

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+    Y+ +   YP+ + H+GH     I+DVL+R++RL G  VL   G D  G     A
Sbjct: 41  KDANTRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGDQVLQPMGWDAFGMPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A    V    +   N  N R     L +S D   +F   T + ++   +  + ++  KG 
Sbjct: 101 AIANQVAPAKWTFSNIDNMRAQLKTLGLSIDWSREFATCTPE-YYRWEQWFFLQLYKKGL 159

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +YK   +  +   D     +++V    DG+ + +   PV+  +   Y+F+++ Y
Sbjct: 160 VYKKLATVNWDPVDNTVLANEQV---VDGKGWRSGA-PVEKRDIPMYYFKITDY 209


>gi|78357185|ref|YP_388634.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552202|sp|Q30ZF7|SYI_DESDG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78219590|gb|ABB38939.1| Isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 934

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +  +   +PAD+++ G D  R  FH+    A + +  +
Sbjct: 535 ILDVWFDSGTSFAAVV------EQREECSFPADMYLEGSDQHRGWFHSSLL-ASVGTRGI 587

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HG+++  +G K+SKS+GN I P E+I++ G + LR ++
Sbjct: 588 PPYKAVLTHGYVVDGEGRKMSKSIGNGIAPQEIIDKYGAEILRMWV 633


>gi|256371124|ref|YP_003108948.1| aminoacyl-tRNA synthetase class Ia [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256007708|gb|ACU53275.1| aminoacyl-tRNA synthetase class Ia [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 855

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 63/306 (20%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKD 206
           +YY    +P++ +    +F R+   +D+LL   E   E   LP   +  +  +++   +D
Sbjct: 376 KYYEKGEHPLEVLATRQWFIRVLPLRDRLL---ERAAELDWLPPHMQVRLEDWIRGLNQD 432

Query: 207 LSLSRKTFDWGIKIP-------------------------DDPQY--------------- 226
            ++SR+ F +GI IP                          DPQ                
Sbjct: 433 WNVSRQRF-FGIPIPLWYPVREDGSVDYDHPLRPAKEDLPVDPQSEAPRGYADEQRGVPG 491

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PA 277
                  ++  W  +        G+ + PD   AK +P +L   G++I+R    Y    A
Sbjct: 492 GFVGDPDVLDTWATSSLTPQLAGGWGERPD-LFAKVFPMELRPQGQEIIRTWLFYTVVRA 550

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L    LP  + + S   +    +K+SKS GNV+ P+ ++E  G DA+R++     A G+
Sbjct: 551 ELAFGRLPWRRALISGWVLDPDRKKMSKSKGNVVTPMPLVERFGADAVRHW----AANGR 606

Query: 338 DGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSV 393
            G     D  + RV   LA  + N    ++S +          +P   A  E+ ++ ++ 
Sbjct: 607 PGTDTAADEAQMRVGRRLAIKVANASRFALSRVASRSSHKPAWVPIDAAELEALDATIAR 666

Query: 394 CSRVLQ 399
            + +L+
Sbjct: 667 ATELLE 672



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          HIGH +    AD++AR+ R+ G +V +  G D++G    +  QN
Sbjct: 52 HIGHVFSYTHADIIARYQRMQGKEVFYPIGWDDNGVPTERRVQN 95


>gi|21221030|ref|NP_626809.1| leucyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256787807|ref|ZP_05526238.1| leucyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289771692|ref|ZP_06531070.1| leucyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|32171584|sp|Q9RDL5|SYL_STRCO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|6714677|emb|CAB66249.1| leucyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289701891|gb|EFD69320.1| leucyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 966

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 61  KPKKFIMDMFPYPSGAGLHVGHPLGYIATDVFARFQRMTGHNVLHTLGFDAFGLPAEQYA 120

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N +N +     L + +D
Sbjct: 121 VQTGTHPRVSTEANMKNMQSQLRRLGLGHD 150


>gi|300791129|ref|YP_003771420.1| leucyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299800643|gb|ADJ51018.1| leucyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 946

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+    H+GH    I  DV AR+HR+ G +VL T G D  G    + A 
Sbjct: 55  DKLFVQDMFPYPSGSGLHVGHPLGFISTDVFARYHRMIGRNVLHTMGFDAFGLPAEQYAV 114

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
             G   +   ++N R +      L + +D+  R +
Sbjct: 115 QTGQHPRKTTEENIRTYLRQIRRLGLGHDERRRIS 149


>gi|255015281|ref|ZP_05287407.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256840399|ref|ZP_05545907.1| isoleucyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256737671|gb|EEU50997.1| isoleucyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 1140

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++    ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 637 QIYPADFIAEGVDQTRGWFFTLHALGTMIFDSVAY-KAVVSNGLVLDKNGNKMSKRLGNA 695

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 696 VDPFSTIEKYGSDPLRWYMITNASPWDNIKFDIDGIEE 733


>gi|284036627|ref|YP_003386557.1| leucyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815920|gb|ADB37758.1| leucyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 949

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 9/128 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R K Y+     YP+ A  H+GH    I +D+++R+ RL G +VL   G D  G    + 
Sbjct: 30  DRPKYYVLDMFPYPSGAGLHVGHPLGYIASDIVSRYKRLKGYNVLHPMGFDSFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G    V  +QN   + +    +  SYD    + E R  D     W +      I+ 
Sbjct: 90  AIQTGQHPAVTTEQNLTRYIEQLKNIGFSYD---WSREVRTSDPSYYKWTQW-----IFM 141

Query: 122 GCYSGWYS 129
             +  WY+
Sbjct: 142 ELFRSWYN 149


>gi|315230480|ref|YP_004070916.1| valyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183508|gb|ADT83693.1| valyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 887

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  WID+    L  T +  +    K  F P  L   G DI+R  A Y  +  ++L+   
Sbjct: 455 VLDCWIDSSITPLVITKWTKDEKWFKHNF-PTALRPQGTDIIRTWAFYTIFRTYILTGQK 513

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P    + +       G K+SKS GNV+ P EVI + G DALR +
Sbjct: 514 PWHDILINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLW 557



 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG
Sbjct: 38 IDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMRGYNVLFPQGFDNHG 84


>gi|294629305|ref|ZP_06707865.1| leucyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292832638|gb|EFF90987.1| leucyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 963

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 64  RPKKFIMDMFPYPSGAGLHVGHPLGYIATDVYARFQRMTGHNVLHTLGFDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N +     L + +D
Sbjct: 124 VQTGTHPRVSTEANMENMKAQLRRLGLGHD 153



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 18/134 (13%)

Query: 294 GFILHKGEKIS-------KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           G   ++GEK+S       KSL N + P E+  E G D LR +   E+A G         +
Sbjct: 719 GAYYYQGEKVSRLLGKMGKSLKNAVTPDEICAEYGADTLRLY---EMAMG------PLDV 769

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +  +     G   L+ R    I+ +  G +    A  E DE  L    + +  +R++++
Sbjct: 770 SRPWDTRAVVGQFRLLQRLWRNIVDETTGEVTVTDA--EPDEETLRALHKAIDGVRQDLE 827

Query: 407 NQLIHRALAQVISL 420
               + A+A+V  L
Sbjct: 828 GLRFNTAIAKVTEL 841


>gi|308235658|ref|ZP_07666395.1| valyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311115203|ref|YP_003986424.1| valine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946697|gb|ADP39401.1| valine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 922

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 14/144 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFL 279
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L
Sbjct: 519 QDIMDTWATSSLTPQIVTRWEEPGEENQALFKATFPMDLRPQGQDIIRTWLFSTVDRAHL 578

Query: 280 LSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +  LP      S G+IL   HK  K+SKS GNV+ P + IEE G DA+RY+       G
Sbjct: 579 ENGCLPWKHAALS-GWILDPDHK--KMSKSKGNVVVPNKPIEEFGADAVRYWAT-SAKLG 634

Query: 337 KDGFYDKDGLK--KRVNADLANGI 358
            D  YD+  +K  +R+   L N  
Sbjct: 635 LDATYDEGQMKIGRRLAIKLLNAT 658



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARYKRMQGFDVFYPMGWDDNGLPTER 105

Query: 61  AAQN 64
             QN
Sbjct: 106 RVQN 109


>gi|157124563|ref|XP_001654107.1| isoleucyl tRNA synthetase [Aedes aegypti]
 gi|108873953|gb|EAT38178.1| isoleucyl tRNA synthetase [Aedes aegypti]
          Length = 863

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           I+ +W D+  ++L+  G      G +     ADL++ G D  +F   +  + L S    N
Sbjct: 479 ILDIWFDSGISWLSVLG------GEQK----ADLYLEGLD--QFTGWFQSSLLTSVAARN 526

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               + +F HGF +  KG K+SKSLGN+I P +++++ G D LR+++ 
Sbjct: 527 ESPYRALFVHGFAVDEKGMKMSKSLGNIISPKDIVKQYGCDTLRWWVA 574


>gi|295677443|ref|YP_003605967.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437286|gb|ADG16456.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDELQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 NALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRTKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      A+  Q A       +++    FR +  + D  +D+  +T    +     
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKAGFRRLGVLGD--WDNPYKTMNFANEAGEI 171

Query: 108 ILWKKISDKGDIYKG 122
               KI +KG +++G
Sbjct: 172 RALAKIMEKGYVFRG 186


>gi|238651071|ref|YP_002916929.1| isoleucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511514|sp|C4K2T0|SYI_RICPU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|238625169|gb|ACR47875.1| isoleucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 1092

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 603 HGVILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 662

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 663 TLRLFIKPIWNAYHFFTMYANADSLKGKLNFSSKNV-------------------LDVYI 703

Query: 391 LSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRAST 446
           LS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   A  
Sbjct: 704 LSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKSEKDTDKQNAYN 763

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 764 TLYSCLDT---MAIAMSALVPMISEAIYKGLRHCEE 796


>gi|156937781|ref|YP_001435577.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|187629828|sp|A8AB68|SYC_IGNH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|156566765|gb|ABU82170.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 464

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 125/333 (37%), Gaps = 75/333 (22%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           ++Y+     Y ++  HIGHA   +  D++ ++ RL G +V+      +   KI   A+  
Sbjct: 24  RMYVCGPTVYDHS--HIGHARTWVAFDIIKKYLRLKGYNVIHVQNITDIDDKIINRAREL 81

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ K   D  +  + ++   L +      R T+  H D      + + DKG        
Sbjct: 82  GVSWKEVADTYTNEYFELMKKLKVFPTVHPRVTD--HIDDIIEFVQDLVDKG-------- 131

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
                           Y    G Y++    P        Y+ +LS  +DK +    S  E
Sbjct: 132 --------------YAYVTQSGVYFDVDKYP--------YYGQLSGIKDKKMW---SQEE 166

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LT 240
           F+             K    D +L      W    P +P +    W      +       
Sbjct: 167 FVKD-----------KKNPYDFAL------WKCAKPGEPWWDS-PWCKGRPGWHIECSTM 208

Query: 241 TTGYL----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           ++ YL    D   G++   +P   + I +   RF    W  + L +           G++
Sbjct: 209 SSKYLGKQFDVHGGARDLIFPHHENEIAQSEARFGVRPWVKYWLHS-----------GYL 257

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             KGEK+SKSLGN++   +V++    + +RY+L
Sbjct: 258 TVKGEKMSKSLGNIVPLKDVLKSFEPEVVRYWL 290


>gi|94501195|ref|ZP_01307717.1| isoleucyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426622|gb|EAT11608.1| isoleucyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 966

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 14/158 (8%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +       P  K V +HGF +  +G+K+SKSLGNV+ P
Sbjct: 583 PADLYLEGSDQHRGWFQSSMLTSVGARGKAPY-KTVLTHGFTVDGEGKKMSKSLGNVVSP 641

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V+ ++G D LR ++      G+    D+  + KR  AD    I N    +   +L + 
Sbjct: 642 QDVVNKLGADILRLWVAATDYSGEMTVSDE--ILKRT-ADSYRRIRN----TTRFLLANI 694

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            G  P       + E +L + + ++ +  E +Q ++IH
Sbjct: 695 SGFDPKTDLL--APEKMLPLDAWIVDQA-EQLQEEIIH 729



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+K  +     Y N   HIGH+   ++ D++ +   L+G D  +  G D HG        
Sbjct: 48  RDKFILHDGPPYANGDIHIGHSVNKVLKDIIIKAQTLNGKDAPYVPGWDCHGLPIELNVE 107

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++I KA ++  V  K F  Q  R +  M  V D   +DF R
Sbjct: 108 KQIGKAGKD--VDAKTF-RQKCREYA-MTQV-DGQRNDFKR 143


>gi|55378488|ref|YP_136338.1| valyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579342|sp|Q5V1H0|SYV_HALMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|55231213|gb|AAV46632.1| valyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 901

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 22/236 (9%)

Query: 254 KFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGN 309
           + +P DL   G DI+ F   H +    +  +  +P  + V  +G +L +  E +SKS GN
Sbjct: 522 ELYPFDLRPQGHDIISFWLFHTVV-KCYEHTGEVPF-ENVMINGMVLDENREAMSKSKGN 579

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVS 367
           VI P EV+EE  VDA RY+     + G D  Y +  L+  +R+   L N    LV +   
Sbjct: 580 VIPPSEVLEEFPVDATRYWAAG-TSIGDDFPYKEGDLEAGERLLQKLWNA-SRLVDQLTP 637

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
               D       P      DE +L+     ++ +    ++    +A  ++ S    +  D
Sbjct: 638 AARPD------EPEELAAVDEWLLAELDATVESVTAKFEDYEFSKARNELRSFFWNTFCD 691

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            Y +  K    ++ +   A +  +  ++  R    L   F+P +  ++++  +  D
Sbjct: 692 DYLEIAK----QRLSDGEAVSTEFTLLQAHRTFLQLFAPFLPHITEELWERCYEED 743


>gi|46446681|ref|YP_008046.1| leucyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|60390710|sp|Q6MCC8|SYL_PARUW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46400322|emb|CAF23771.1| probable leucyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 845

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH       D++AR+ R  G +V+   G D  G    + 
Sbjct: 29  QKPKYYVLDMFPYPSGAGLHVGHVVGYTATDIIARYMRTKGYNVMHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  N+R     L  SYD    + T++  ++   + ++ K+ +KG  
Sbjct: 89  AIRTGTHPAESTQENINNYRRQLRALGFSYDWNRELATSDPNYYKWTQWIFTKLYEKGLA 148

Query: 120 YKG 122
           Y+ 
Sbjct: 149 YEA 151



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 37/177 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS  N   P E+I+E G DALR +         + F      +K  N D  +G   
Sbjct: 622 DKMSKSKLNGESPDEIIQEYGADALRLY---------EMFMGPLEKEKVWNTDAVSGTRR 672

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   M   D            E+ E  L +  R++  + ++M+    + A+A+++  
Sbjct: 673 FLNRFYEMAFSD--------KVTNETSEEGLKLGHRLVHSVMKDMELLQFNTAIAKMMEF 724

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++E  +     K                    +VI+    +L  F P LA ++++ L
Sbjct: 725 INEFTKLVTYPK--------------------QVIQMATQVLAPFAPHLAEEVWEHL 761


>gi|325298094|ref|YP_004258011.1| Valyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317647|gb|ADY35538.1| Valyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 875

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 35/268 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D  +  ++W  +L N     G LD PD  +  ++ P    V G DI+ F    W A ++ 
Sbjct: 458 DTWFSSWLWPISLFN-----GILD-PDNEEINYYYPTSDLVTGPDIIFF----WVARMIM 507

Query: 282 A------NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           A      ++P  + V+  G +  K G K+SKSLGN  DP+E+I++ G D +R  ++    
Sbjct: 508 AGYEYKHDMPF-RNVYFTGIVRDKIGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLSAP 566

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +D D L ++   +  N I N         + D    I  P     + E   ++ 
Sbjct: 567 AGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKGWNVAD----IEQPEYARIATEWFKAML 620

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYV 450
           ++   E+ +      +  AL  V  L      ++D    W L+   P        T    
Sbjct: 621 TKTTLEVTDLFGKYRLSEALMAVYKL------FWDEFSSWYLEMVKPAYGQPIDRTTYEQ 674

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
           T++    L + L  F+P +  +++  ++
Sbjct: 675 TLKFFEALLMQLHPFMPFITEELWQHIY 702


>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 916

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++ +       P+ S    +PADL+  G D  R  F++    A       
Sbjct: 524 IMDVWFDSGSSHRSVLE--TRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 578 PY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKGDIY 120
            +     ++ A   +DI   DF R   +   D   I            L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|297571136|ref|YP_003696910.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931483|gb|ADH92291.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 890

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 12/193 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM  W  +        G+L + D   +K +P D+   G+DI+R    +    A L   ++
Sbjct: 525 IMDTWATSSLTPQIAGGWLTDED-LFSKVYPMDVRPQGQDIIRTWLFSTMVRAHLEFNDV 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  +D+ 
Sbjct: 584 PWKHAAISGWILDPDRKKMSKSKGNVVTPMGLLEKHGSDAVRYWAA-SARLGTDAAFDEQ 642

Query: 345 GLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEI 401
            +K  +R+   L N     +    + +  D D       A TE  D ++L+  + V+++ 
Sbjct: 643 QMKIGRRLAMKLLNASKFALQMGGAGVKVDLDS-----SAVTEPIDRAMLAELAGVVEQA 697

Query: 402 RENMQNQLIHRAL 414
            +  +N    RAL
Sbjct: 698 TQAYENYDHTRAL 710



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H+GH +     D +AR+ R+ G++V +  G D++G    +  QN
Sbjct: 63  HVGHVFSYTHTDTVARYKRMQGMNVFYPMGWDDNGLPTERRVQN 106


>gi|257425247|ref|ZP_05601672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257271704|gb|EEV03842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
          Length = 748

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 297 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 356

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 357 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 409

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 410 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 453


>gi|189030341|sp|A1U4A0|SYL_MARAV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 861

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 23/201 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G      A+
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGL----PAE 87

Query: 64  NAGVTTKVFVDQNSRN----FRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
           NA +  K    + +R+     ++    L   YD    + T +  ++   +  + ++ +KG
Sbjct: 88  NAAIANKSAPAKWTRSNIDYMKNQLKQLGFGYDWSRELATCDPEYYRWEQWFFARLYEKG 147

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            +YK   +  +   D+    +++V  G     G     +  P QW      F R++ Y +
Sbjct: 148 LVYKKMSTVNWDPVDQTVLANEQVVDGRGWRSGALVEQKKIP-QW------FIRITDYAE 200

Query: 175 KLLS---YYESHPEFILPIER 192
           +LL+     E  PE +  ++R
Sbjct: 201 ELLNDLEDMEGWPEQVKTMQR 221


>gi|150007105|ref|YP_001301848.1| isoleucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|149935529|gb|ABR42226.1| isoleucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 1140

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++    ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 637 QIYPADFIAEGVDQTRGWFFTLHALGTMIFDSVAY-KAVVSNGLVLDKNGNKMSKRLGNA 695

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 696 VDPFSTIEKYGSDPLRWYMITNASPWDNIKFDIDGIEE 733


>gi|124024122|ref|YP_001018429.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964408|gb|ABM79164.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 1370

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 19/115 (16%)

Query: 227  IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
             M VW D+ +++       D         +PA+L++ G D  R  F +    +  +++  
Sbjct: 956  TMDVWFDSGSSWAAVASQQD------GLAYPAELYLEGSDQHRGWFQSSLLTSVAINSQA 1009

Query: 285  PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
            P  ++V +HGF L  KG K+SKSLGNV+DP  +I+           G D LR ++
Sbjct: 1010 PY-RQVLTHGFALDEKGRKMSKSLGNVVDPAVIIDGGKNQKQEPPYGADVLRLWV 1063


>gi|313891340|ref|ZP_07824956.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313120115|gb|EFR43291.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 937

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNP-DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +   T  G +  P +  K   +P DL++ G D  R  F +    +  ++  
Sbjct: 542 IMDVWFDSGS---TWNGVVKQPREEWKGMAFPCDLYLEGSDQHRGWFQSSLLTSVAVNGK 598

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K + +HGF +  +G K+SKS+GNV+ P  +I   G D +R ++ 
Sbjct: 599 APY-KALLTHGFTVDGEGRKMSKSVGNVVAPQTIINRYGADVMRLWIA 645



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N + HIGHA    + D++ R+  ++G +V F  G D HG  I  A        +    
Sbjct: 60  YANGKIHIGHALNKTLKDIIVRYKFMEGNNVNFVPGWDTHGLPIEYAVLKESGEDRANMT 119

Query: 73  -VDQNSRNFRDMADVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDI 119
            ++   +        + I  +DFIR            T  +H +  +I ++ +++ +G I
Sbjct: 120 PIELRRKCLEYAKKWIAIQKEDFIRMGVIGDWNNPYVTYDKHLEARQIEVFGEMAKRGYI 179

Query: 120 YKG 122
           YKG
Sbjct: 180 YKG 182


>gi|283782702|ref|YP_003373456.1| valine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283442071|gb|ADB14537.1| valine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 925

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 14/144 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFL 279
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L
Sbjct: 519 QDIMDTWATSSLTPQIVTRWEEPGEENQALFKATFPMDLRPQGQDIIRTWLFSTVDRAHL 578

Query: 280 LSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +  LP      S G+IL   HK  K+SKS GNV+ P + IEE G DA+RY+       G
Sbjct: 579 ENGCLPWKHAALS-GWILDPDHK--KMSKSKGNVVVPNKPIEEFGADAVRYWAT-SAKLG 634

Query: 337 KDGFYDKDGLK--KRVNADLANGI 358
            D  YD+  +K  +R+   L N  
Sbjct: 635 LDATYDEGQMKIGRRLAIKLLNAT 658



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARYKRMQGFDVFYPMGWDDNGLPTER 105

Query: 61  AAQN 64
             QN
Sbjct: 106 RVQN 109


>gi|187925133|ref|YP_001896775.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|254782379|sp|B2T6I7|SYI_BURPP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187716327|gb|ACD17551.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 945

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ T +      L      + +F PADL++ G D  R  FH+    A +L    P  
Sbjct: 552 VWFDSGTTHWHV---LRGSHKDELQF-PADLYLEGSDQHRGWFHSSLLTASMLDGRPPY- 606

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +HGF +  +G K+SKSLGN IDP EV   +G + +R ++ 
Sbjct: 607 NALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIA 650



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      A+  Q A       +++    FR +  + D  +D+  +T    +     
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGD--WDNPYKTMNFTNEAGEI 171

Query: 108 ILWKKISDKGDIYKG 122
               KI +KG +++G
Sbjct: 172 RALAKIMEKGYVFRG 186


>gi|146337356|ref|YP_001202404.1| leucyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166230613|sp|A4YJS8|SYL_BRASO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146190162|emb|CAL74154.1| leucine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 874

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DVLARF R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHVRNYTLGDVLARFMRAKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  K +   N    +     + +S D
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLRSIGLSLD 121



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 14/177 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++IE  G D  R+F++ +    +D  +  + ++    A     +  
Sbjct: 629 EKMSKSKKNTVDPDDIIESYGADVARWFMLSDSPPDRDVIWSDERVQG--AARFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ SV+      +     P  F+    ++       L ++   ++    +  LA +   
Sbjct: 687 LVNESVA---ASAEAPSSRPANFSADALALRKAAHGALDKVTGGIERLHFNVCLAHIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +       KP    K  PD A    + T E    L  L    +P LA + + +L
Sbjct: 744 ANALADVL--AKP---AKPAPDLA----WATREAAGILVQLFSPMMPHLAEECWQVL 791


>gi|34581420|ref|ZP_00142900.1| isoleucyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262805|gb|EAA26309.1| isoleucyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 1103

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 614 HGIILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 673

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 674 TLRLFIKPIWNAYHFFTMYANADSLKGKLNFSSKNV-------------------LDVYI 714

Query: 391 LSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRAST 446
           LS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   A  
Sbjct: 715 LSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKSEKDTDKQNAYN 774

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 775 TLYSCLDT---MAIAMSALVPMISEAIYKGLRHCEE 807


>gi|326797485|ref|YP_004315304.1| isoleucyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326548249|gb|ADZ76634.1| Isoleucyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 1137

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F  ++  A +L  ++   K V S+G +L K G K+SK LGN +D
Sbjct: 639 YPADFIAEGVDQTRGWFFTLHAIATMLCDSVAF-KNVVSNGLVLDKNGNKMSKRLGNAVD 697

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P   I +   DA R++++   A   +  ++++GL
Sbjct: 698 PFATISKYSADATRWYMISNAAPWDNLKFNEEGL 731


>gi|301311233|ref|ZP_07217161.1| isoleucine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300830807|gb|EFK61449.1| isoleucine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 1140

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++    ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 637 QIYPADFIAEGVDQTRGWFFTLHALGTMIFDSVAY-KAVVSNGLVLDKNGNKMSKRLGNA 695

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 696 VDPFSTIEKYGSDPLRWYMITNASPWDNIKFDIDGIEE 733


>gi|291439712|ref|ZP_06579102.1| leucyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291342607|gb|EFE69563.1| leucyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 961

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 59  RPKKFIMDMFPYPSGAGLHVGHPLGYIATDVYARFQRMTGHNVLHTLGFDAFGLPAEQYA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N +     L + +D
Sbjct: 119 VQTGTHPRVSTEANIENMKSQLRRLGLGHD 148


>gi|262381098|ref|ZP_06074236.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296275|gb|EEY84205.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 1140

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++    ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 637 QIYPADFIAEGVDQTRGWFFTLHALGTMIFDSVAY-KAVVSNGLVLDKNGNKMSKRLGNA 695

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 696 VDPFSTIEKYGSDPLRWYMITNASPWDNIKFDIDGIEE 733


>gi|254368674|ref|ZP_04984688.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121589|gb|EDO65766.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|221134245|ref|ZP_03560550.1| leucyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 860

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  +   YP+ + H+GH     I DV++R  R+ G +VL   G D  G     AA 
Sbjct: 33  REKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRHQRMLGKNVLQPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           N       +   N    +   + L   YD   +F  T +  ++   +  + ++ +KG +Y
Sbjct: 93  NNNTAPAKWTYSNIEYMKGQLNSLGFGYDWEREFA-TCQPDYYRWEQWFFTRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG 144
           K   +  +   D+    +++V  G
Sbjct: 152 KKLSTVNWDPIDQTVLANEQVIDG 175


>gi|330718573|ref|ZP_08313173.1| leucyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 809

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D+++R+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRYKRAQGFNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F +QN   F+     L  S D    I TT+   +   + +++K+ +KG  Y
Sbjct: 90  IKTGNNPAEFTNQNIEVFKKQVKSLGFSIDWSREINTTDPEFYKWSQWIFEKLYEKGLAY 149

Query: 121 K 121
           +
Sbjct: 150 E 150



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 19/174 (10%)

Query: 259 DLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLGNV 310
           DL+V G +    H +Y   W  FL    +   K+ F    + G IL +  EK+SKS GNV
Sbjct: 530 DLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGENHEKMSKSKGNV 589

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +++   G D LR + +      +   + ++G+         +G    + R   +++
Sbjct: 590 VNPDDIVSTYGADTLRVYEMFMGPLTQSKPWSEEGI---------SGSRRWLDRVWRLLI 640

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            D D +       T +   +  +  + ++++ ++++N   + A++Q++  V+E 
Sbjct: 641 DDEDRL--RDHVTTVNTGELDKIYHQTVKKVTDDLENMRFNTAISQLMVFVNEA 692


>gi|313125097|ref|YP_004035361.1| valyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291462|gb|ADQ65922.1| valyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 870

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 21/171 (12%)

Query: 252 KAKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSL 307
           + + +P D+   G DI+ F   H +    +  +  +P    V  +G +L +  EK+SKS 
Sbjct: 486 REELYPFDVRPQGHDIISFWLFHTVV-KCYEHTGEVPF-DSVMINGMVLDENREKMSKSK 543

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+ P EV+ +  VDA RY+     A G D  Y + GL  R    L   + N  S+ V 
Sbjct: 544 GNVVSPDEVMSKYPVDAARYWAAGS-AVGDDLPYSEKGL--RAGEKLLRKLWN-ASKLVD 599

Query: 368 MILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRA 413
            + +D       P +F      + D  +L+   R ++ + E +QN+   +A
Sbjct: 600 SLSED------APESFDHDDLKQIDRWLLASLDREIEHVTEKLQNREFSKA 644



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H GHAY   + D +ARF+R+ G +V F  G D++G  IA              D + R F
Sbjct: 52  HWGHAYGFTLQDFVARFNRMRGKEVFFPFGFDDNG--IASERLTEDELDVRHQDYDRREF 109

Query: 81  RDMA 84
           ++M 
Sbjct: 110 QEMC 113


>gi|56697968|ref|YP_168339.1| isoleucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81819937|sp|Q5LNR7|SYI_SILPO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56679705|gb|AAV96371.1| isoleucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 970

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +       D  DG+      AD+++ G D  R  FH+    A       
Sbjct: 576 VLDVWFDSGSTHAFV--LRDREDGTADGI--ADVYMEGTDQHRGWFHSSLLQACGTLGRA 631

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKSLGN I P EV+++ G D LR ++ +
Sbjct: 632 PY-RNVVTHGFTLDEKGMKMSKSLGNTIVPDEVVKQYGADILRLWVAQ 678



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R    +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I
Sbjct: 55  RAPFTLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPI 109


>gi|307824332|ref|ZP_07654558.1| valyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734712|gb|EFO05563.1| valyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 931

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +N +   AK +P  + V G DI+ F    W A ++   L  
Sbjct: 458 VLDTWFSSALWPFSTLGWPENTE-ELAKHYPTSVLVTGFDIIFF----WVARMIMMGLKF 512

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 K+V+ HG +   +G+K+SKS GNV+DPI++I+ + ++AL
Sbjct: 513 QGKVPFKEVYIHGLVRDAEGQKMSKSKGNVLDPIDIIDGIELEAL 557



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA++  I D L R+HR+ G   L+  GTD  G   Q + +   NA   T+       
Sbjct: 47  HMGHAFQDTIMDALTRYHRMKGFSTLWQPGTDHAGIATQMVVERLCNAEDKTRHDYGREK 106

Query: 72  FVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+++            +R  R M   LD + + F  T +    D  + ++ ++ ++G IY
Sbjct: 107 FIEKIWEWKEESGGTITRQLRRMGSSLDWNKERF--TMDDGMSDAVQEVFIRLYEEGLIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166


>gi|110802688|ref|YP_697972.1| leucyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123146264|sp|Q0SV78|SYL_CLOPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110683189|gb|ABG86559.1| leucine--tRNA ligase [Clostridium perfringens SM101]
          Length = 816

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 17/184 (9%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEVEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQ 173
           KG  Y+      +    +    +++V  GA  +      + +  QW      FF+++ Y 
Sbjct: 145 KGLAYRKKAPVNWCPSCQTVLANEQVVDGACERCSTEVTKKDLTQW------FFKITDYA 198

Query: 174 DKLL 177
           D+LL
Sbjct: 199 DELL 202



 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|120555655|ref|YP_960006.1| leucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120325504|gb|ABM19819.1| leucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 864

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 23/201 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G      A+
Sbjct: 35  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGL----PAE 90

Query: 64  NAGVTTKVFVDQNSRN----FRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
           NA +  K    + +R+     ++    L   YD    + T +  ++   +  + ++ +KG
Sbjct: 91  NAAIANKSAPAKWTRSNIDYMKNQLKQLGFGYDWSRELATCDPEYYRWEQWFFARLYEKG 150

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            +YK   +  +   D+    +++V  G     G     +  P QW      F R++ Y +
Sbjct: 151 LVYKKMSTVNWDPVDQTVLANEQVVDGRGWRSGALVEQKKIP-QW------FIRITDYAE 203

Query: 175 KLLS---YYESHPEFILPIER 192
           +LL+     E  PE +  ++R
Sbjct: 204 ELLNDLEDMEGWPEQVKTMQR 224


>gi|254372408|ref|ZP_04987898.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570136|gb|EDN35790.1| isoleucyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|14521079|ref|NP_126554.1| leucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14285784|sp|Q9V0B9|SYL_PYRAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|5458296|emb|CAB49785.1| leuS leucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 967

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF  G    G  I   A+ 
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMGWHITGSPIVGIAER 93



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D    GKD++  H      F +  ++ +      PK +  +GF   +G+K+SKS G
Sbjct: 601 WYPLDWRCSGKDLIPNHL----TFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKG 656

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 657 NVLNFIDAIEENGADVVRLYIM 678


>gi|120553891|ref|YP_958242.1| valyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323740|gb|ABM18055.1| valyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 950

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 29/177 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S AI  PN     H+GHA++  I D L RF R+ G + L+T GTD           +AG+
Sbjct: 34  SIAIPPPNVTGSLHMGHAFQHTIMDTLTRFKRMQGRNALWTVGTD-----------HAGI 82

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFI-RTTEKRHHDTCRIL--WKKISDKGDIYKGCY 124
            T++ V++      D     D+  ++FI R  + + H    I    +++ +  D     +
Sbjct: 83  ATQMVVERKLAAEEDKTR-HDLGREEFIKRIWDWKEHSGGTITRQMRRLGNSVDWSNERF 141

Query: 125 S---GWYSLRDEAY---YNDDEVYKGA-----DGQYYNAQHN-PVQWMEEEGYFFRL 169
           +   G+Y    E +   Y++  VY+G      D + + A  +  V+  EE+GYF+ L
Sbjct: 142 TMDDGFYKAVQEVFIRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEEKGYFWHL 198



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 59/219 (26%)

Query: 235 LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK--- 289
            ++ L T G L  P+ ++    F P D+ V G DI+ F    W A ++   +   K    
Sbjct: 475 FSSALWTFGTLGWPEITERLKTFHPTDVLVTGFDIIFF----WVARMIMMTMHFMKNEDG 530

Query: 290 --------VFSHGFILHK-GEKISKSLGNVIDPIEVIEEV-------------------- 320
                   V+  G I  + G+K+SKS GNVIDP+++I+ +                    
Sbjct: 531 TPQVPFHTVYVTGLIRDEHGDKMSKSKGNVIDPLDMIDGISLPDLLEKRTGNLMQPKLAE 590

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L      G+D  +D   L+   N    N + N  +
Sbjct: 591 KIGKRTEKEFPEGIAAHGTDALRFTLAAMATTGRDINWDMKRLEGYRN--FCNKLWN-AA 647

Query: 364 RSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEI 401
           R V M  +  D G+   P   + +D  I+S      QE+
Sbjct: 648 RYVLMNTEGEDCGVNNEPVELSLADRWIISELQHCEQEV 686


>gi|255007852|ref|ZP_05279978.1| valyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313145559|ref|ZP_07807752.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134326|gb|EFR51686.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 876

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 472 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 526

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 527 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 572


>gi|171913427|ref|ZP_02928897.1| leucyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 863

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K ++     YP+ Q  H+GH       D++AR+ R+ G +VL   G D  G    + A
Sbjct: 42  KPKYFVLDMFPYPSGQGLHVGHPEGYTATDIVARYKRMTGHNVLHPMGWDAFGLPAEQYA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +   ++N  NFR+    L  +YD
Sbjct: 102 IKTGQHPRTTTEKNVENFRNQLKRLGFAYD 131



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 8/87 (9%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSAN---LPLP-KKVFSHGFILHK-GE 301
           GS  K    DL+V G +    H +Y   W   L        P P +K+ + G IL +  +
Sbjct: 563 GSSGKPGGVDLYVGGTEHAVLHLLYARFWHKVLYDLGHVVTPEPFQKLVNQGLILGEDSQ 622

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKS GNV++P +VI E G D+LR +
Sbjct: 623 KMSKSRGNVVNPDDVIVEYGADSLRLY 649


>gi|288917986|ref|ZP_06412345.1| leucyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350641|gb|EFC84859.1| leucyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 1063

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ R+  Y+     YP+    H+GH    I +DV ARF R+ G  VL T G D  G    
Sbjct: 111 VQGRDPFYVLDMFPYPSGTGLHVGHPLGYIGSDVFARFLRMTGRHVLHTFGYDAFGLPAE 170

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A N G   +V  + N  N R     L + +D
Sbjct: 171 QYAINTGQHPRVTTEANIANMRRQLSRLGLGHD 203


>gi|157412597|ref|YP_001483463.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980057|sp|A8G2P6|SYI_PROM2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157387172|gb|ABV49877.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 965

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 39/283 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++            S+ K+ PADL++ G D    H  ++ + LL++    N
Sbjct: 553 MDVWFDSGSSWAAVC-----EQRSELKY-PADLYLEGSDQ---HRGWFQSSLLTSVAVNN 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
            P  K+V +HGF L   G K+SKSLGNV+DP  +I            G D LR + V  +
Sbjct: 604 KPPYKRVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKSEPAYGADVLRLW-VSSV 662

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DE 388
               D     + LK+   +D+   + N  +R +   + DYD   P   +F        D+
Sbjct: 663 DYSVDVPIGSNILKQL--SDVYRKVRN-TARYLLGNIHDYD---PNIDSFEIDQLPLLDQ 716

Query: 389 SILSVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRAS 445
            +L     V  +I    ++    R   + Q   +V   + Y D A+    +   +  R  
Sbjct: 717 WMLGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSQFRRR 776

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQ 487
           +  +V  +V+  LA+L+   +  +A  I+ +I ++  E   FQ
Sbjct: 777 SCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYLTKEKSVFQ 819



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           Y N   H+GHA   ++ D++ ++  L G  V +  G D HG  I  K  QN
Sbjct: 69  YANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELKVLQN 119


>gi|308800374|ref|XP_003074968.1| IleS Isoleucine-tRNA synthetase, probable (IC) [Ostreococcus tauri]
 gi|119358843|emb|CAL52239.2| IleS Isoleucine-tRNA synthetase, probable (IC) [Ostreococcus tauri]
          Length = 1137

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 25/252 (9%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVI 311
           +PAD    G D  R    ++   +LS  L   P  K +  +G +L   G+K+SKSL N  
Sbjct: 569 FPADFVAEGLDQTR--GWFYTLMVLSTALFDKPAFKNLICNGLVLAADGKKMSKSLKNYP 626

Query: 312 DPIEVIEEVGVDALRYFLV-------REIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           DP  ++++ G DALR +L+         +   +DG +   G+ K V     N    LV +
Sbjct: 627 DPNTILDKYGADALRLYLIDSPVVRAEPLRFKEDGVF---GVLKDVFLPWYNAYRFLV-Q 682

Query: 365 SVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +V    +     +P+ G  + +  D  I S  + +++ + E MQ+  ++  + ++IS + 
Sbjct: 683 NVLAFEETSGTFMPSQGTKSTNVLDIWITSSTNSLVKFVTEEMQDYKLYTVVPKLISFID 742

Query: 423 EVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++   +       LK +   D +   L V   V+  L   +  F P     I+  L    
Sbjct: 743 QLTNIYVRYNRGRLKGRAGIDESYLALNVLFHVLLTLCKTMAPFTPFFVENIYQNL---- 798

Query: 482 ENRCFQSLDQRL 493
             RC    ++ +
Sbjct: 799 -RRCLPESEESI 809


>gi|304320514|ref|YP_003854157.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299416|gb|ADM09015.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 864

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 31/64 (48%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          +R K YI     YP+ + HIGH     + DVLAR+ R  G DVL   G D  G     AA
Sbjct: 30 DRPKSYILEMFPYPSGKIHIGHVRNYAMGDVLARYKRAKGYDVLHPMGFDAFGMPAENAA 89

Query: 63 QNAG 66
             G
Sbjct: 90 MATG 93



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 83/177 (46%), Gaps = 22/177 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP+ + +  G DA ++F++ +    +D  + + G++    A  A  + +
Sbjct: 626 EKMSKSKKNVVDPMGMADSYGADATKFFVLSDSPPERDVEWTESGVEG--AARFAGRVYD 683

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SR   ++L+  +   P+ G     +  +       +  + +++ +   ++A+A++  L
Sbjct: 684 LASRYEGVLLRATEQ--PSAG-----EAPLRRAVHSAIVGVSDDIDHFRFNKAIARLYEL 736

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  +           L   +P+  +T      E +   + LL  F+P LA + + ++
Sbjct: 737 LGALK---------SLTAASPENLATA----AEALSVFSRLLAPFMPHLAEECWSLI 780


>gi|328676512|gb|AEB27382.1| Isoleucyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|262274982|ref|ZP_06052793.1| valyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221545|gb|EEY72859.1| valyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 952

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 129/336 (38%), Gaps = 76/336 (22%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           RNE     K GL  + + R+  D           ++  W    ++ L T G L  P  + 
Sbjct: 449 RNEEEVRAKHGLAPVVVLRQDED-----------VLDTW---FSSALWTFGTLGWPQQTP 494

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLLSANL----------PLP-KKVFSHGFIL-H 298
               F P D+ V G DI+ F    W A ++   +           +P K V+  G I   
Sbjct: 495 ELKTFHPTDVLVTGFDIIFF----WVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
            G+K+SKS GNV+DPI++                                     IE  G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTP 380
            DALR+ L    + G+D  +D   L+   N    N + N  SR V M  +D D GM    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNKLWN-ASRYVLMNTEDQDCGMKGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
            AF+ +D+ I S      +E   +++N  +  A   +   +     D Y +  KP   K 
Sbjct: 668 MAFSLADKWIESQFQLAAKEFNAHIENFRLDMAANTLYEFIWNQFCDWYLELTKPVLWKG 727

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           T   + +T  +  + V+ +   L    +P +   I+
Sbjct: 728 TEAQQRAT-RHTLITVLEKTLRLAHPVIPYITESIW 762


>gi|118497048|ref|YP_898098.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194324283|ref|ZP_03058057.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|166200209|sp|A0Q529|SYI_FRATN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118422954|gb|ABK89344.1| isoleucyl-tRNA synthetase [Francisella novicida U112]
 gi|194321730|gb|EDX19214.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|300114688|ref|YP_003761263.1| isoleucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540625|gb|ADJ28942.1| isoleucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 940

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  + V +HGF +  KG+K+SKS GNV+ P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLLTSVAIRGTAPY-RTVLTHGFTVDAKGKKMSKSQGNVVAP 616

Query: 314 IEVIEEVGVDALRYFLV 330
            +V+E +G D LR ++ 
Sbjct: 617 QQVMESLGADILRLWVA 633



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           + R +  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  RGRPRFILHDGPPYANGAIHIGHAVNKILKDIIVKSKSLSGFDAPYVPGWDCHGLPI 102


>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++KG 
Sbjct: 118 AEYLEKCREYALSQVDKQREDFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++KG 
Sbjct: 118 AEYLEKCREYALSQVDKQRADFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|253563620|ref|ZP_04841077.1| valyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251947396|gb|EES87678.1| valyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 876

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 472 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 526

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 527 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 572


>gi|253690014|ref|YP_003019204.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511510|sp|C6DF04|SYI_PECCP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|251756592|gb|ACT14668.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 937

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K+PD     + VW D+ + + +         G  A     D+++ G D  R  F +   
Sbjct: 525 VKVPD----TLDVWFDSGSTHASVVDVRPEFGGHAA-----DMYLEGSDQHRGWFMSSLM 575

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +  +    P  ++V +HGF +  +G K+SKS+GN + P +V+ ++G D LR ++     
Sbjct: 576 ISTAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWIGSTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV- 393
            G+    D+  + KR +AD    I N    +   +L + +G  P   +    D  +L   
Sbjct: 635 SGEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPQKDSVKPEDMVVLDRW 687

Query: 394 ---CSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C++  Q EI E  ++   HR + +++   S
Sbjct: 688 AVGCAKAAQEEILEAYESYDFHRVVQRLMQFCS 720


>gi|239931338|ref|ZP_04688291.1| leucyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 958

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 56  RPKKFIMDMFPYPSGAGLHVGHPLGYIATDVYARFQRMTGHNVLHTLGFDAFGLPAEQYA 115

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N +     L + +D
Sbjct: 116 VQTGTHPRVSTEANIENMKSQLRRLGLGHD 145


>gi|89255846|ref|YP_513208.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314333|ref|YP_763056.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501826|ref|YP_001427891.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010068|ref|ZP_02274999.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|122325634|sp|Q0BNB5|SYI_FRATO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123287343|sp|Q2A4Z4|SYI_FRATH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200208|sp|A7NAD2|SYI_FRATF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89143677|emb|CAJ78876.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129232|gb|ABI82419.1| isoleucine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252429|gb|ABU60935.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|53712342|ref|YP_098334.1| valyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60680513|ref|YP_210657.1| valyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|265762535|ref|ZP_06091103.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81316418|sp|Q5LGN1|SYV_BACFN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81825070|sp|Q64XH6|SYV_BACFR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52215207|dbj|BAD47800.1| valyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60491947|emb|CAH06707.1| putative valyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|263255143|gb|EEZ26489.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301162050|emb|CBW21594.1| putative valyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 876

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 472 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 526

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 527 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 572


>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++KG 
Sbjct: 118 AEYLEKCREYALSQVDKQRADFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|325957776|ref|YP_004289242.1| leucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329208|gb|ADZ08270.1| leucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 958

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          ++K+Y++ A  YP+   H+GH     + DV ARF R+ G +VLF  G    G  +   A+
Sbjct: 27 KKKVYVTVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVLFPMGWHVTGAPVVGIAK 86


>gi|293370847|ref|ZP_06617392.1| valine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292634063|gb|EFF52607.1| valine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|258423763|ref|ZP_05686649.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845995|gb|EEV70023.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 917

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + + I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGDIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    A       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTAVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|255534346|ref|YP_003094717.1| isoleucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340542|gb|ACU06655.1| Isoleucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 1161

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 663 KAFPADFIAEGVDQTRGWFYTLHAIGTAVFDSVAY----KNVMSNGLVLDKNGQKMSKRL 718

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GN +DP   +E+ G DA R++++      ++  +D +G+
Sbjct: 719 GNAVDPFTTLEKYGPDATRWYMIANANPWENLKFDVEGI 757



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVT-----TK 70
           N  P I H     + D+  R+   +G  V    G D HG  I    +   G+T     TK
Sbjct: 52  NGMPGIHHVMARALKDIFCRYQTQNGKQVFRKAGWDTHGLPIELGVEKELGITKEDIGTK 111

Query: 71  VFVD---QNSRN--------FRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           + V+   Q  RN        + D+ + +   +  DD   T E ++ +T   L K++ DK 
Sbjct: 112 ISVEDYNQACRNAVMRYTDVWNDLTEKIGYWVDLDDPYITYEPKYMETVWWLLKQLYDKN 171

Query: 118 DIYKG 122
            +YKG
Sbjct: 172 LLYKG 176


>gi|183598114|ref|ZP_02959607.1| hypothetical protein PROSTU_01478 [Providencia stuartii ATCC 25827]
 gi|188020272|gb|EDU58312.1| hypothetical protein PROSTU_01478 [Providencia stuartii ATCC 25827]
          Length = 860

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 6/174 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     + DV++R+ RL G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTMGDVISRYQRLLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +    +L   Y  D  + T    ++   +  + K+ +KG +YK
Sbjct: 92  KNKTAPAPWTYANIDYMKGQLKMLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
              +  +   D     +++V    DG  +     PV+  E   +F +++ Y ++
Sbjct: 152 KTSAVNWCPHDLTVLANEQVI---DGCCWRCD-TPVERKEIPQWFIKITDYAEE 201


>gi|56708016|ref|YP_169912.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670487|ref|YP_667044.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457097|ref|ZP_03665570.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370499|ref|ZP_04986504.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874815|ref|ZP_05247525.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820780|sp|Q5NGD0|SYI_FRATT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122970960|sp|Q14HT2|SYI_FRAT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56604508|emb|CAG45548.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320820|emb|CAL08931.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568742|gb|EDN34396.1| hypothetical protein FTBG_00275 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840814|gb|EET19250.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159204|gb|ADA78595.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 930

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 574 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 618



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + +
Sbjct: 56  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 115

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIY 120
            +  +  R+ A   +D   +DF R            T +  +      ++ K+++KG IY
Sbjct: 116 AEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIY 175

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 176 KGLKPIYWSPSSESSLAEAEI 196


>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++KG 
Sbjct: 118 AEYLEKCREYALSQVDKQRADFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|208780505|ref|ZP_03247845.1| isoleucyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743651|gb|EDZ89955.1| isoleucyl-tRNA synthetase [Francisella novicida FTG]
          Length = 919

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 515 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 567

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 568 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 609



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 32 REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 86


>gi|32491043|ref|NP_871297.1| hypothetical protein WGLp294 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81741734|sp|Q8D2R0|SYI_WIGBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25166249|dbj|BAC24440.1| ileS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 940

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
            DL++ G D  R  F +    +  ++  +P  KK+ +HGF++   G+K+SKS+GNVI P 
Sbjct: 558 VDLYLEGSDQYRGWFMSSIILSIAITGGIPC-KKILAHGFVVDSNGKKMSKSIGNVISPK 616

Query: 315 EVIEEVGVDALRYFL 329
           ++I E G D LR ++
Sbjct: 617 DIINEFGADILRLWV 631



 Score = 43.9 bits (102), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K ++  ++     Y N   HIGHA   I+ D++ +F  L G D  +  G D HG  I   
Sbjct: 47  KGKKTFFLHDGPPYANGDIHIGHAVNKILKDIIIKFKSLFGFDAPYMPGWDCHGLPIELQ 106

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
              K  QN          +  RN+    D ++    +FIR
Sbjct: 107 VEKKINQNINKINHKIFREKCRNY--ALDQVNKQKKEFIR 144


>gi|86140543|ref|ZP_01059102.1| putative valyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832485|gb|EAQ50934.1| putative valyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 877

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 36/244 (14%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-----HK 299
           NPD +  K++ P +  V G DIL F    W A ++ A      +K F++ ++       +
Sbjct: 477 NPDNADFKYYYPTNDLVTGPDILFF----WVARMIMAGYEYTGEKPFTNVYLTGLVRDAE 532

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGN  D +++I++ G D +R  L+   + G D  +D+D  ++        G  
Sbjct: 533 RRKMSKSLGNSPDAMKLIDDYGADGVRVGLLLSASAGNDLLFDEDLCQQ------GKGFV 586

Query: 360 NLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ----EIRENMQNQLIHRAL 414
           N +  +  +I   + D  IP P    ES E  L+  +   +    EI ++     I  AL
Sbjct: 587 NKIWNAFRLIKGWEVDATIPQP----ESSEKGLAWYNERFKQATVEIEDHFSKYRISDAL 642

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLA 470
                LV      +D    W L+   P+    +        +E +     +L  F+P  +
Sbjct: 643 MTTYKLV------WDDFCSWLLEIVKPEYGKPIDKKTFDAVIEALENNLRILHPFIPFAS 696

Query: 471 NKIF 474
            +I+
Sbjct: 697 EEIW 700


>gi|329121488|ref|ZP_08250112.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327469403|gb|EGF14873.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 937

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNP-DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +   T  G +  P +  K   +P DL++ G D  R  F +    +  ++  
Sbjct: 542 IMDVWFDSGS---TWNGVVKQPREEWKGMSFPCDLYLEGSDQHRGWFQSSLLTSVAVNGK 598

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K + +HGF +  +G K+SKS+GNV+ P  +I   G D +R ++ 
Sbjct: 599 APY-KALLTHGFTVDGEGRKMSKSVGNVVAPQTIINRYGADVMRLWIA 645



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N + HIGHA    + D++ R+  ++G +V F  G D HG  I  A        +    
Sbjct: 60  YANGKIHIGHALNKTLKDIIVRYKFMEGNNVNFVPGWDTHGLPIEYAVLKESGEDRANMT 119

Query: 73  -VDQNSRNFRDMADVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDI 119
            ++   +        + I  +DFIR            T  +H +  +I ++ +++ +G I
Sbjct: 120 PIELRRKCLEYAKKWIAIQKEDFIRMGVIGDWNNPYVTYDKHLEARQIEVFGEMAKRGYI 179

Query: 120 YKGCYSGWYSLRDEAYYNDDEV 141
           YKG  + ++    E    + E+
Sbjct: 180 YKGKKTVYWCANCETALAEAEI 201


>gi|307132647|ref|YP_003884663.1| isoleucyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306530176|gb|ADN00107.1| isoleucyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 941

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     + VW D+ + + +         G  A     D+++ G D  R  F +    
Sbjct: 530 KVPD----TLDVWFDSGSTHASVVDVRPEFSGHAA-----DMYLEGSDQHRGWFMSSLMI 580

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           +  +    P  ++V +HGF +  +G K+SKS+GN + P +V++++G D LR ++      
Sbjct: 581 STAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLGADILRLWIGSTDYS 639

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV-- 393
           G+    D+  + KR +AD    I N    +   +L + +G  P   +    D  +L    
Sbjct: 640 GEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPAQHSVKPEDMVVLDRWA 692

Query: 394 --CSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
             C++  Q EI E  ++   HR + +++   S
Sbjct: 693 VGCAKAAQDEIVEAYESYDFHRVVQRLMQFCS 724


>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++K  
Sbjct: 118 AEYLEKCREYALSQVDKQRADFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKSY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|229585079|ref|YP_002843581.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228020129|gb|ACP55536.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 944

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +     ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|229579332|ref|YP_002837730.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238619982|ref|YP_002914808.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|228010046|gb|ACP45808.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238381052|gb|ACR42140.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 944

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +     ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|229581908|ref|YP_002840307.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012624|gb|ACP48385.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 944

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +     ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|254373879|ref|ZP_04989361.1| isoleucine-tRNA ligase [Francisella novicida GA99-3548]
 gi|151571599|gb|EDN37253.1| isoleucine-tRNA ligase [Francisella novicida GA99-3548]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|86133790|ref|ZP_01052372.1| valyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820653|gb|EAQ41800.1| valyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 30/247 (12%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHKG 300
           NP+  + K++ P +  V G DIL F    W A ++ A          + V+  G +  K 
Sbjct: 478 NPENEEIKYYYPTNDLVTGPDILFF----WVARMIVAGYEYKDAKPFENVYLTGLVRDKQ 533

Query: 301 E-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGN  D +++I++ G D +R  L+     G D  +D+D  ++        G  
Sbjct: 534 RRKMSKSLGNSPDALKLIDDYGADGVRVGLLLSAPAGNDILFDEDLCQQ------GKGFA 587

Query: 360 NLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           N +  +  +I   + D  +  P           +   + L EI ++     +  AL  + 
Sbjct: 588 NKIWNAFRLIKGWEVDASLEQPETAKIGLSWYEAKFQKALAEIEDHFSKYRLSDALMAIY 647

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVIRQLAILLQAFVPKLANKIF 474
            L++      D    W L+   P     +  VT    +EV+     +L  F+P L  +I+
Sbjct: 648 KLIN------DDFSSWLLEIVKPAYQHPIDQVTFDAIIEVLENNLKVLHPFMPFLTEEIW 701

Query: 475 DILFVAD 481
              F+A+
Sbjct: 702 Q--FIAE 706


>gi|330686341|gb|EGG97946.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 916

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTSVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV  K    
Sbjct: 58  YANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKM-- 115

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            ++  FR+       + ++I   DF R            T K  ++  +I L+ ++++KG
Sbjct: 116 -STAEFREKCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 LIYKGKKPVYWSPSSESSLAEAEI 198


>gi|299148648|ref|ZP_07041710.1| valine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298513409|gb|EFI37296.1| valine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 930

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 574 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 618



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 56  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 115

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++K  
Sbjct: 116 AEYLEKCREYALSQVDKQRADFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKSY 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 174 IYKGLKPIYWSPSSESSLAEAEI 196


>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
          Length = 930

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 574 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 618



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 56  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 115

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++KG 
Sbjct: 116 AEYLEKCREYALSQVDKQRADFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKGY 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 174 IYKGLKPIYWSPSSESSLAEAEI 196


>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 930

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 574 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 618



 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + +
Sbjct: 56  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 115

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIY 120
            +  +  R+ A   +D   +DF R            T +  +      ++ K+++KG IY
Sbjct: 116 AEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIY 175

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 176 KGLKPIYWSPSSESSLAEAEI 196


>gi|237721424|ref|ZP_04551905.1| valyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229449220|gb|EEO55011.1| valyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|227827809|ref|YP_002829589.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227459605|gb|ACP38291.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 944

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +     ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|257784644|ref|YP_003179861.1| isoleucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473151|gb|ACV51270.1| isoleucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 17/135 (12%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K+ L D  +  K     +K   D   I+ VW D+  ++     +  N      KF PAD+
Sbjct: 525 KTYLGDACVCPKCGGHNLKANKD---ILDVWWDSGVSHTAVCKHRPN-----LKF-PADM 575

Query: 261 HVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           ++ G D    H  ++ + L+++     +   K V S GF L  +G K+SKSLGNVIDP  
Sbjct: 576 YLEGSDQ---HRGWFMSSLMTSVGAYGVAPYKSVVSQGFTLDGQGRKMSKSLGNVIDPNA 632

Query: 316 VIEEVGVDALRYFLV 330
           V  E G D LR ++ 
Sbjct: 633 VCAERGADVLRLWVA 647



 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 21/161 (13%)

Query: 1   MKERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           MK+ E   K  +     Y N   H+GHA   I  D++ R+  + G    +  G D HGQ 
Sbjct: 43  MKKNEGHDKFVLHDGPPYANGPIHLGHAQNKISKDIINRYKAMQGFQTPYVPGWDCHGQP 102

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR---------------- 101
           I    +   + T+ F   ++   R++   + +   D  R   KR                
Sbjct: 103 IEHKVEQM-LGTEKFNQLSTEKIRELCRKMAVEQVDTQRQGFKRLGVLGEWDNPYLTYVN 161

Query: 102 HHDTCRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +D   I ++K I DKG +Y+G     +   D    ++ E+
Sbjct: 162 DYDATDIEIFKAIYDKGSVYRGTKPVHWCTHDHTALSEAEI 202


>gi|146186117|ref|XP_001033039.2| valyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146143176|gb|EAR85376.2| valyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 1037

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 23/191 (12%)

Query: 146 DGQYYNAQHNPVQWMEEEGYFF--RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           +  ++    NP  W      ++  R+ AYQ ++     S    +          ++V   
Sbjct: 480 ESNWFQFMRNPQDWCISRQLWWGHRIPAYQYRVKGTSTSSDGTV--------TTNWVVGR 531

Query: 204 LKDLSLSRKTFDWGIK------IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            +D +L R   + G+       I D+   ++  W  +     +T G+ +  D  +A F+P
Sbjct: 532 TEDEALERAAKNLGVSKDQIELIQDED--VLDTWFSSALFPFSTMGWPNQTDDLQA-FYP 588

Query: 258 ADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
             +   G DIL F    +     LL   LP  K VF H  I   +GEK+SKS GNVIDP+
Sbjct: 589 NSILETGWDILFFWVARMVMMGLLLLNKLPF-KDVFLHPMIRDSQGEKMSKSKGNVIDPL 647

Query: 315 EVIEEVGVDAL 325
           E+I+   +  L
Sbjct: 648 EIIDGCNLQTL 658


>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + +
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIY 120
            +  +  R+ A   +D   +DF R            T +  +      ++ K+++KG IY
Sbjct: 118 AEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPIYWSPSSESSLAEAEI 198


>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 930

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 574 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 618



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K    
Sbjct: 56  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 115

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  ++    T +  +      ++ K+++KG 
Sbjct: 116 AEYLEKCREYALSQVDKQREDFKRLGVAGD--WEHPYVTLDPSYEAAQVRVFGKMAEKGY 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 174 IYKGLKPIYWSPSSESSLAEAEI 196


>gi|239636330|ref|ZP_04677332.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
 gi|239597685|gb|EEQ80180.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
          Length = 916

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTSVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV  K    
Sbjct: 58  YANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKM-- 115

Query: 75  QNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            ++  FR+       + ++I   DF R            T K  ++  +I L+ ++++KG
Sbjct: 116 -STAEFREKCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 LIYKGKKPVYWSPSSESSLAEAEI 198


>gi|118475500|ref|YP_892134.1| valyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414726|gb|ABK83146.1| valyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 873

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 21/137 (15%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---------AKFWPADLHVIGKDI 267
           G K   DP  ++  W  +    ++T G+  N D  K         ++F+P  + + G DI
Sbjct: 438 GNKFTQDPD-VLDTWFSSGLWPISTLGW-GNADELKNEKWFERDLSEFYPNTMLITGFDI 495

Query: 268 LRFHAIYWPAFLL----SANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321
           L F    W A ++    +A   LP K ++ H  +  K G+K+SKS GNVIDP+  I+E  
Sbjct: 496 LFF----WVARMMFQCGNAVGELPFKDIYLHALVKDKDGKKMSKSSGNVIDPLTKIDEYS 551

Query: 322 VDALRYFLVREIACGKD 338
            D LR+ L      G+D
Sbjct: 552 ADILRFTLTLLCVQGRD 568


>gi|260171542|ref|ZP_05757954.1| valyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315919856|ref|ZP_07916096.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693731|gb|EFS30566.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|308235143|ref|ZP_07665880.1| leucyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114617|ref|YP_003985838.1| leucine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946111|gb|ADP38815.1| leucine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 994

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 15/129 (11%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 66  RPSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH---DTCRILWKKISDKGDI 119
              G   ++  + N  N R     + +S+DD      +R     DT  + W +      I
Sbjct: 126 VQTGQHPRITTEANIANMRRQLHRMGLSFDD------RRSFATIDTNYVRWTQW-----I 174

Query: 120 YKGCYSGWY 128
           +   Y  WY
Sbjct: 175 FSKLYDAWY 183


>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 932

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 576 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 620



 Score = 43.9 bits (102), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFV 73
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N GV  K + +
Sbjct: 58  YANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQVLANKGVKRKEMSM 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIY 120
            +  +  R+ A   +D   +DF R            T +  +      ++ K+++KG IY
Sbjct: 118 AEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGLKPIYWSPSSESSLAEAEI 198


>gi|187931314|ref|YP_001891298.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254782406|sp|B2SF88|SYI_FRATM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187712223|gb|ACD30520.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFILHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|160887156|ref|ZP_02068159.1| hypothetical protein BACOVA_05172 [Bacteroides ovatus ATCC 8483]
 gi|156107567|gb|EDO09312.1| hypothetical protein BACOVA_05172 [Bacteroides ovatus ATCC 8483]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGQMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D
Sbjct: 529 DKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|323474877|gb|ADX85483.1| leucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477618|gb|ADX82856.1| leucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 944

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +     ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|315925980|ref|ZP_07922185.1| isoleucyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620801|gb|EFV00777.1| isoleucyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 1042

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 27/273 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           ++PD    ++ VW D+ +       Y  +N D    +F PAD    G D  R  F+++  
Sbjct: 515 RVPD----VVDVWFDSGSMPFAQQHYPFENKDAWADQF-PADFICEGIDQTRGWFYSLLA 569

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  ++   P    + +   +  +G+K+SKS GN ++P  + ++ G DALR++L+     
Sbjct: 570 ISTFITGKSPYHNVLVNDLVLDAEGQKMSKSKGNTVNPFALFDQYGADALRWYLMYVSPA 629

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---------IPTPGAFTES 386
                +D++GLK+ V +   N   N  + +   +  + DG+            P A    
Sbjct: 630 WTPTRFDEEGLKE-VRSKFFNTFKN--TYAFFALYANTDGIDADALAGDAFAVPVADRPV 686

Query: 387 -DESILSVCSRVLQEIRENM----QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            D  ILS   R+++++   M     N ++H     V   +S      + ++ W     N 
Sbjct: 687 IDRWILSKYHRLVRDVTAAMDAYNHNTVVHLIQNFVNEDLSNWYIRRNRRRFWA-SAMNA 745

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D+ + V   T EV+  L  L   F P +  +++
Sbjct: 746 DKKA-VYRTTFEVLEGLCRLCAPFAPFITEEMY 777


>gi|293379839|ref|ZP_06625961.1| leucyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290923611|gb|EFE00492.1| leucyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 804

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRKNMRQWM------LKMTAY 196


>gi|254293695|ref|YP_003059718.1| valyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042226|gb|ACT59021.1| valyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 1032

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   PD +    KF+P    V G DI+ F    W A ++   +
Sbjct: 551 VLDTWFSSALWPFSTMGW---PDKTPELDKFYPTATLVTGFDIIFF----WVARMMMQGI 603

Query: 285 PLPKKV-----FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              K+V     + H  +L + G+K+SKS+GNVIDPI++I+    D L    VR+I    +
Sbjct: 604 HFMKEVPFKDVYIHALVLDEDGKKMSKSIGNVIDPIDIIDGCDFDTLIAKRVRDIKKTGN 663

Query: 339 GFYDKDGLKKRVN 351
              DK   K   N
Sbjct: 664 EKKDKAAEKAITN 676



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA    + D+L R+ R+ G DVL+  GTD           +AG+
Sbjct: 39 SIVIPPPNVTGVLHMGHALNNTLQDLLCRYQRMQGKDVLWQPGTD-----------HAGI 87

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 88 ATQMVVERQ 96


>gi|253995630|ref|YP_003047694.1| valyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982309|gb|ACT47167.1| valyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 962

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 16/112 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKS 306
           ++ P+ + V G DI+ F    W A +      ++  +P  K V+ HG I   +G+K+SKS
Sbjct: 519 QYLPSSVLVTGFDIIFF----WVARMVMMTTHITGKIPF-KHVYVHGLIRDAEGQKMSKS 573

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GNV+DPI++I+ +G+D     L+++   G     D + ++KR   +   GI
Sbjct: 574 KGNVLDPIDLIDGIGLDD----LIKKRTTGLMNPKDAEKIEKRTRKEFPEGI 621



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GH +   + D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 65  HMGHGFNQTLMDALTRYHRMRGDNTLWQPGTD-----------HAGIATQIVVERQ 109


>gi|206890484|ref|YP_002248496.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742422|gb|ACI21479.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 915

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 10/137 (7%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           + K  L DL       + G +  D  + I+ VW D+  ++        +P  S    WPA
Sbjct: 502 WFKLNLHDLLPDYSCPECGSRDFDKEKDILDVWFDSGVSHAAVLE--RDPRLS----WPA 555

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           D+++ G D  R  F +    +       P  K V +HGF +  +G K+SKSLGNVI P E
Sbjct: 556 DMYLEGSDQHRGWFQSSLIASLGNKGKAPY-KIVLTHGFTVDGQGRKMSKSLGNVISPQE 614

Query: 316 VIEEVGVDALRYFLVRE 332
           +I+  G D +R ++  E
Sbjct: 615 IIKSNGADIVRLWVSAE 631



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I+ D++ ++H + G    F  G D HG  I      +    K  +D
Sbjct: 62  YANGHIHIGHALNKILKDIIVKYHSMLGQYSPFVPGWDCHGLPIELQVDKSLGKEKENID 121

Query: 75  --QNSRNFRDMAD-VLDISYDDFIR 96
             +  +  R+ A+  ++I  D+FIR
Sbjct: 122 IFKKRQLCREYAEKFINIQRDEFIR 146


>gi|203288168|ref|YP_002223183.1| valyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085388|gb|ACH94962.1| valyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 877

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P    V   DI+ F    W A ++ A L    +V F   +I       KG+K+SKSLG
Sbjct: 475 YYPTTTLVTAYDIIFF----WVARMVMAGLEFMGEVPFRDIYITPLLRDKKGQKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD-KDGLKKRVNADLANGIGNLVSRSVS 367
           N IDP+++IE+ G DALR+ L      G+D   D KD +     A  AN + N    +  
Sbjct: 531 NGIDPLKIIEQYGSDALRFTLSFLSVQGQDLNIDTKDFM---FGAKFANKVFN----ASK 583

Query: 368 MILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
            IL +  G ++     F + D+ +++  +  +  I  + +N   + A   V         
Sbjct: 584 FILSNLKGRLVLDSLEFDDIDKWLITRLNATVAVIDWSFENYKYNEATKAVYEFFWNDFC 643

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  K   L   + D  +  +   +  +++  +++  F+P +  +I+
Sbjct: 644 DWYIEISKI-NLCSDDFDLQNITISKLIFFLKESLLIMHPFIPFITEEIY 692



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 13/100 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D+L R+ R+ G + L+  GTD           +AG+ T+   ++  R  
Sbjct: 52  HMGHALNFTLQDILVRYKRMKGFNTLWLFGTD-----------HAGIATQTVFEKQLREL 100

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               D  D S ++FI    +  +   +I+  ++   G  Y
Sbjct: 101 GKSKD--DFSREEFIEGILELKNKHRKIIVNQVEKLGASY 138


>gi|124025030|ref|YP_001014146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166229754|sp|A2C071|SYI_PROM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123960098|gb|ABM74881.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 967

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 91/232 (39%), Gaps = 63/232 (27%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  +   E +F  +  ++DK LS  E      LP   +N + S V+    D  +SR+   
Sbjct: 434 PTIFRATEQWFASVEGFRDKALSAIED--VIWLPESGKNRINSMVRE-RGDWCISRQR-T 489

Query: 216 WGIKIP----DDPQYIMY------------------VWIDALTNYLTTTGYLDNPD---- 249
           WG+ IP     + Q I+                   +W +   + L    YL+  D    
Sbjct: 490 WGVPIPVFYEKNGQEILLNKETISHIADLFSVHGADIWWEYEVSELLPPSYLNQADRWQK 549

Query: 250 -GSKAKFW-------------------PADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
                  W                   PADL++ G D  R  F +    +  ++ + P  
Sbjct: 550 GTDTMDVWFDSGSSWSSVISKKENLNYPADLYLEGSDQHRGWFQSSLLTSVAVNEHAPF- 608

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
           KKV +HGF L   G K+SKSLGN+IDP+ +I            G D LR ++
Sbjct: 609 KKVLTHGFALDENGRKMSKSLGNIIDPLVIINGGSNKKLDPAYGADVLRLWV 660



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   ++ D++ +F  + G  V +  G D HG  I
Sbjct: 69  YANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPI 112


>gi|84029516|sp|Q3YRX3|SYI_EHRCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72394255|gb|AAZ68532.1| Isoleucyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 1120

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
           ++PAD   I + I +    ++  F+LS    N P       HG +L  +G+K+SK L N 
Sbjct: 598 YFPADF--ITEYIAQTRGWFYTLFILSTALFNKPPFINCICHGVVLDTQGQKLSKRLNNY 655

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGL 346
            DP+E+  + G DA+R+ ++   +  G D   DK+G+
Sbjct: 656 ADPMEIFNQYGSDAMRFLMLSHTVLYGGDLLLDKEGV 692


>gi|325955042|ref|YP_004238702.1| isoleucyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437660|gb|ADX68124.1| Isoleucyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 1135

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 37/188 (19%)

Query: 255 FWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
            +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK LG
Sbjct: 632 MYPADFIAEGVDQTRGWFYTLHAIATLVFDSKAY----KNVMSNGLVLDKNGQKMSKRLG 687

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG---LKKRVNADLANGIGNLVSRS 365
           N IDP + +E  G DA R++++      ++  +D  G   ++++    L N      + S
Sbjct: 688 NAIDPFDTLETYGPDATRWYMIANAQPWENLKFDLAGVDEVRRKFFGTLYN------TYS 741

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              +  + DG       FT ++           +EI    +++L    L+++ +L+ +VD
Sbjct: 742 FFALYANVDG-------FTYAE-----------KEIPVEERDELDQWILSELNTLIQQVD 783

Query: 426 RYFDAQKP 433
            +F   +P
Sbjct: 784 EFFSDYEP 791



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVT-----TK 70
           N +P I H     I D+  RF  L G  V+   G D HG  +    +   G+T     TK
Sbjct: 53  NGKPGIHHVLARSIKDIFCRFQTLKGKQVIRKAGWDTHGLPVELGTEKELGITKEDIGTK 112

Query: 71  VFVDQNSR-------NFRDMADVLD------ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           + ++Q +         + D+ + L       +  DD   T + ++ +T   L K+I DKG
Sbjct: 113 ITIEQYNEACKRTVMRYTDLWNNLTEKMGYWVDMDDPYITYKPKYMETVWWLLKQIYDKG 172

Query: 118 DIYKG 122
            +YKG
Sbjct: 173 YLYKG 177


>gi|302794101|ref|XP_002978815.1| hypothetical protein SELMODRAFT_443981 [Selaginella moellendorffii]
 gi|300153624|gb|EFJ20262.1| hypothetical protein SELMODRAFT_443981 [Selaginella moellendorffii]
          Length = 1031

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP  ++  W  +     ++ G+ D+     A F+P  +   G DIL     +W A 
Sbjct: 482 KLQHDPD-VLDTWFSSGLFPFSSLGWPDS-TADYAAFYPTTVLETGHDIL----FFWVAR 535

Query: 279 L------LSANLPLPKKVFSHGFI--LHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +      L+  LP  K V  HG +   HK  K+SKSLGNVIDP++VI  + +D L
Sbjct: 536 MVMLGTQLTGQLPF-KTVLLHGMVRDAHK-RKMSKSLGNVIDPLDVISGISLDGL 588


>gi|134302194|ref|YP_001122163.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166200210|sp|A4IYP1|SYI_FRATW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134049971|gb|ABO47042.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 935

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  FT   D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPI 102


>gi|328698635|ref|XP_003240691.1| PREDICTED: valyl-tRNA synthetase-like [Acyrthosiphon pisum]
          Length = 990

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 13/107 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     ++ G+ D  +  K K++P  +   G DIL F    W A +      L
Sbjct: 511 VLDTWFSSALLPFSSFGWPDETEDLK-KYYPLSVMETGHDILTF----WIARMVMLGTFL 565

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + +LP  K V  HG I  + G K+SKSLGNV+DP ++I  + +D L+
Sbjct: 566 TGSLPF-KNVILHGMICDNHGRKMSKSLGNVVDPEDIINGISLDDLQ 611



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA    I D++ R++R+ G+DV++  GTD  G      A    V  K+F ++N
Sbjct: 89  HLGHALTATIQDIIVRWYRMSGVDVVWVPGTDHAG-----IATQVVVEKKLFAEKN 139


>gi|308177627|ref|YP_003917033.1| valine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307745090|emb|CBT76062.1| valine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 872

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 14/169 (8%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           +K +P DL   G DI+R    +    A  L  N P      S   +    +K+SKS GNV
Sbjct: 541 SKVYPFDLRPQGHDIIRTWLFSTAVRADSLHDNAPWKHAAISGWILDPDRKKMSKSKGNV 600

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANG---IGNLVSRS 365
           + P EV+++ G DA+RY+       G D  Y+ + +K  +R+   + N    + NL +  
Sbjct: 601 VVPNEVLDKFGADAVRYWAA-SAKLGADTAYEINQMKIGRRLAIKILNASKFVLNLGATD 659

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            + IL D D  + T G     D S+L+  S V+++ +    N    RAL
Sbjct: 660 AN-ILTD-DASVVTNGL----DRSLLARLSTVIEDAKRAFDNYDYARAL 702



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 14/108 (12%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     DVLAR+ R+ G +V +  G D++G    +  
Sbjct: 47  REAVYSIDTPPPTASGSLHVGHMFSYTQTDVLARYQRMIGKNVFYPLGWDDNGLPTERRV 106

Query: 63  QNA-GV---TTKVFV------DQNSRNFRDMADVLDISYDDFIRTTEK 100
           QN  GV    TK ++      ++ ++N RD  DV  IS  +FI   E+
Sbjct: 107 QNYFGVRCDPTKPYIEGYRPPEKPAKNQRDW-DV--ISRKNFIEVCEE 151


>gi|257870266|ref|ZP_05649919.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804430|gb|EEV33252.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 931

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELT----FPADMYLEGSDQYRGWFNSSITTSVAINGEA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN I P +VI+++G D LR ++
Sbjct: 576 PY-KSVLSQGFTLDGEGRKMSKSLGNTIAPEKVIKQMGADILRLWV 620



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I  D++ R   + G    +  G D HG  I +   N G+  K    
Sbjct: 58  YANGNIHIGHALNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGMKRKEMTL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +    D  +  +I  T        R+   K+++KG 
Sbjct: 118 AEYRKKCEEYALTQVDTQREDFKRLGISGDWDH-PYITLTPDYEAAEIRVF-GKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|194334514|ref|YP_002016374.1| isoleucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312332|gb|ACF46727.1| isoleucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 1080

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+ ++  A L+  + P  + +  +G IL K G K+SKS GNV
Sbjct: 572 KTFPADFIAEGVDQTRGWFYTLHAIATLI-FDKPAYRNLVVNGHILDKEGLKMSKSKGNV 630

Query: 311 IDPIEVIEEVGVDALRYFLV 330
           +DP E I   G DALR++L+
Sbjct: 631 VDPFETINRYGADALRWYLI 650


>gi|148261042|ref|YP_001235169.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|189082979|sp|A5G068|SYL_ACICJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146402723|gb|ABQ31250.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 864

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+AR  R  G DVL   G D  G     AA+
Sbjct: 40  RRKCYVLEMFPYPSGKIHMGHVRNYAIGDVIARARRAQGYDVLHPMGWDAFGLPAENAAR 99

Query: 64  NAGVTTKVFVDQNSRNFR-DMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    + D+  V L + +     T +  ++   + L+  +   G  Y+
Sbjct: 100 ERNVDPAKWTRDNIAAMKADLKRVGLSVDWSREFATCDPEYYGHQQKLFLDLWRAGLAYR 159

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG+ + +   PV+  +   +FFR++ +   LL+   
Sbjct: 160 RESAVNWDPVDMTVLANEQVI---DGRGWKSG-APVEKRKLRQWFFRITDFAADLLAGLD 215

Query: 179 YYESHPEFILPIER 192
             E+ PE +  ++R
Sbjct: 216 TLENWPERVRTMQR 229


>gi|330504709|ref|YP_004381578.1| valyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918995|gb|AEB59826.1| valyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 943

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 45/203 (22%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W+ ++ ++       +K ++  ES     +P +  N   S+++  ++D  +SR+ + WG 
Sbjct: 374 WLTDQ-WYVSTKPLAEKAIAVVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQLW-WGH 430

Query: 219 KIP-------------DDPQY----------------IMYVWIDALTNYLTTTGYLDNPD 249
           +IP             D+ +                 ++  W  +     +T G+    D
Sbjct: 431 RIPAWYDEAGNVYVGRDEAEVRAKHNLEGVALRQDEDVLDTWFSSGLWTFSTLGWPQQTD 490

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGEK 302
             K  F P D+ V G DI+ F    W A +      L+  +P  K V+ HG +   +G+K
Sbjct: 491 FLKT-FHPTDVLVTGFDIIFF----WVARMIMLSTHLTGQIPF-KTVYVHGLVRDGQGQK 544

Query: 303 ISKSLGNVIDPIEVIEEVGVDAL 325
           +SKS GNV+DP+++++ + +D L
Sbjct: 545 MSKSKGNVLDPLDIVDGITLDEL 567



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAK---AAQNAG-------- 66
           H+GH +   I D L RF R+ G + L+  GTD  G   Q + +   AAQ  G        
Sbjct: 47  HMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMVVERQLAAQGIGRHDLGREK 106

Query: 67  VTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              KV+  +N      +R  R +   +D S + F  T +    +  +  + ++ + G IY
Sbjct: 107 FLEKVWEWKNQSGGTITRQIRRLGSSVDWSRERF--TMDDGLSEAVKEAFVRLHEDGLIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166


>gi|315608285|ref|ZP_07883275.1| isoleucine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250066|gb|EFU30065.1| isoleucine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 1204

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           KF+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNV
Sbjct: 709 KFYPADFINEGVDQTRGWFFTLHAIATMVFGSVAF-KNVISTGLVLDAKGNKMSKHVGNV 767

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            DP E+I + G D +R++++       +  +D +G+
Sbjct: 768 TDPFEMIGKYGADPVRFYMMTNSEPWDNLKFDPNGV 803


>gi|311895995|dbj|BAJ28403.1| putative leucyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 959

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 8   YISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           +I     YP+ A  H+GH    I  DV ARF R++G +VL T G D  G    + A   G
Sbjct: 64  FIMDMFPYPSGAGLHVGHPLGYIATDVYARFQRMNGYNVLHTLGYDAFGLPAEQYAVQHG 123

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD 92
           V  +V  + N  N R     L + +D
Sbjct: 124 VHPRVSTEDNIANMRRQLRRLGLGHD 149


>gi|290955750|ref|YP_003486932.1| hypothetical protein SCAB_11941 [Streptomyces scabiei 87.22]
 gi|260645276|emb|CBG68362.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 512

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 128/353 (36%), Gaps = 42/353 (11%)

Query: 17  NAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           N   H+GH A   + ADV  R+ R  G D +F TG  +    +   A+  G T +  V  
Sbjct: 15  NGDLHLGHLAGPFLAADVFTRYQRAVGRDTVFGTGAQDTSTFVVTTARRLGTTPEALVAD 74

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
           ++         + I+ D F R  E+      R +  ++ D+G +        Y+     Y
Sbjct: 75  STARIESTLAAMGIAVDGFTRDEERFTKQVLRFV-SRLHDEGKLVLRPTLFPYAPSTGQY 133

Query: 136 YNDDEV--------YKGADGQYYNAQH--------------NP---VQWMEEEGYFFRLS 170
             D  V         +G  G   +  H              NP   ++W E       L 
Sbjct: 134 LVDGFVKGGCPNCLAEGCAGLCESCGHPLAAADLIDARSAENPEEVLEWHEIPVLVLPLE 193

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            Y+ +L  Y+ +    + P      V   +   L D  L+     WGI  P        V
Sbjct: 194 EYRGRLREYFATTGAALRP-HMAQAVEEMLSRPLPDFPLTYP-ISWGIPAPFPEVAGQSV 251

Query: 231 WIDALTNYLT--TTGYLDNPDGS-----KAKFWP-ADLHVI---GKDILRFHAIYWPAFL 279
             +A T   +  TTG      G         +WP +D  V+   G D     AI   A L
Sbjct: 252 NPNAETMAWSIYTTGLSAEARGEVLVEDDQLWWPESDTEVVYFLGFDNTFPFAIAGAAML 311

Query: 280 LSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           L+ +    LP    ++ F   + +K S S G+++   E+ + +  D  RY L 
Sbjct: 312 LALHDRYALPAGFVTNEFYELEHQKFSTSRGHLVWGQELADRLPRDIGRYHLA 364


>gi|224539866|ref|ZP_03680405.1| hypothetical protein BACCELL_04776 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518515|gb|EEF87620.1| hypothetical protein BACCELL_04776 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++   +   K V S+G +L K G K+SK LGN 
Sbjct: 639 QVYPADFIAEGVDQTRGWFFTLHAIASMVFDTISY-KAVISNGLVLDKNGNKMSKRLGNG 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 698 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGIEE 735


>gi|189465798|ref|ZP_03014583.1| hypothetical protein BACINT_02160 [Bacteroides intestinalis DSM
           17393]
 gi|189434062|gb|EDV03047.1| hypothetical protein BACINT_02160 [Bacteroides intestinalis DSM
           17393]
          Length = 1141

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++   +   K V S+G +L K G K+SK LGN 
Sbjct: 639 QVYPADFIAEGVDQTRGWFFTLHAIASMVFDTISY-KAVISNGLVLDKNGNKMSKRLGNG 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 698 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGIEE 735


>gi|326404441|ref|YP_004284523.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051303|dbj|BAJ81641.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 864

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     I DV+AR  R  G DVL   G D  G     AA+
Sbjct: 40  RRKCYVLEMFPYPSGKIHMGHVRNYAIGDVIARARRAQGYDVLHPMGWDAFGLPAENAAR 99

Query: 64  NAGVTTKVFVDQNSRNFR-DMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    + D+  V L + +     T +  ++   + L+  +   G  Y+
Sbjct: 100 ERNVDPAKWTRDNIAAMKADLKRVGLSVDWSREFATCDPEYYGHQQKLFLDLWRAGLAYR 159

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS--- 178
              +  +   D     +++V    DG+ + +   PV+  +   +FFR++ +   LL+   
Sbjct: 160 RESAVNWDPVDMTVLANEQVI---DGRGWKSG-APVEKRKLRQWFFRITDFAADLLAGLD 215

Query: 179 YYESHPEFILPIER 192
             E+ PE +  ++R
Sbjct: 216 TLENWPERVRTMQR 229


>gi|314933910|ref|ZP_07841275.1| leucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654060|gb|EFS17817.1| leucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 804

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P +++   G D LR +      L   IA  ++G    DG ++     
Sbjct: 574 NEKMSKSKGNVINPDDIVSSHGADTLRLYEMFMGPLDAAIAWSENGL---DGSRR----- 625

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                   + R   +I+ + DG +        +D+S+  V ++ ++++ E+      + A
Sbjct: 626 -------FLDRVWRLIVTE-DGSLNNK-IVESNDKSLDKVYNQTVKKVTEDFDALSFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  +++  +  +  KP+
Sbjct: 677 ISQLMVFINDCYKANEIYKPY 697


>gi|303247249|ref|ZP_07333523.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491408|gb|EFL51296.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 940

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +      +PA+L++ G D  R  FH+    A L +   
Sbjct: 538 ILDVWFDSGTSFAAVL------EKRPELAFPANLYLEGSDQHRGWFHSSLL-ASLATRGT 590

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  ++V +HG+++  +G K+SKSLGN I+P E+I++ G + LR +
Sbjct: 591 PPYRQVLTHGYVVDGEGRKMSKSLGNGIEPQEIIDKHGAEILRLW 635


>gi|284998014|ref|YP_003419781.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445909|gb|ADB87411.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 944

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +     ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|237750710|ref|ZP_04581190.1| isoleucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373800|gb|EEO24191.1| isoleucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 975

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      LD+ D +   + PAD+++ G D  R  F +       ++  
Sbjct: 590 HILDVWFDSGSTWFAV---LDSKDYNSG-YAPADVYLEGSDQHRGWFQSSLLLGCAINHK 645

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K + +HGF +  K EK+SKS GNV+ P ++I E G + LR ++ 
Sbjct: 646 APF-KTIITHGFTIDEKSEKMSKSKGNVLAPSKIISESGSEILRLWVA 692



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y N   H+GHA   I+ D + ++H   G  V +T G D HG  I +   NA
Sbjct: 106 YANGHLHVGHALNKILKDFIIKYHYFQGKQVFYTPGWDCHGLPIEQQVSNA 156


>gi|160946485|ref|ZP_02093694.1| hypothetical protein PEPMIC_00449 [Parvimonas micra ATCC 33270]
 gi|158447601|gb|EDP24596.1| hypothetical protein PEPMIC_00449 [Parvimonas micra ATCC 33270]
          Length = 1035

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 4/105 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ +       Y      +  + +PAD    G D  R  F+++   + L++   
Sbjct: 516 VIDVWFDSGSMPFAQHHYPFENKENFGELFPADFISEGIDQTRGWFYSLLAISTLITGKS 575

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  K V  +  IL K G+K+SKS GN IDPIE+ ++ G DA+R++
Sbjct: 576 PY-KNVLVNDLILDKDGKKMSKSRGNTIDPIELFDKYGADAVRFY 619


>gi|15602683|ref|NP_245755.1| valyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|81636973|sp|Q9CMK5|SYV_PASMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12721124|gb|AAK02902.1| ValS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 954

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 25/136 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIA--KAA 62
           S AI  PN     H+GHA++  + D+L RF+R++G + L+ TGTD  G   Q +   K A
Sbjct: 42  SIAIPPPNVTGSLHMGHAFQQTLMDILIRFNRMEGHNTLWQTGTDHAGIATQMVVERKIA 101

Query: 63  QNAGVT-----TKVFVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
              G T      + F+D+            S+  R + + +D   + F  T ++   D  
Sbjct: 102 AEEGKTRHDYGREAFIDKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDEGLSDAV 159

Query: 107 RILWKKISDKGDIYKG 122
           + ++ ++ ++G IY+G
Sbjct: 160 KEVFVRLHEEGLIYRG 175


>gi|326382834|ref|ZP_08204524.1| valyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198424|gb|EGD55608.1| valyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 891

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 23/103 (22%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL-----------------SANLPLPKKVFSHGFI 296
           KF+P  + V G DIL     +W A ++                  A +P    VF HG +
Sbjct: 482 KFYPTSVLVTGYDIL----FFWVARMMMFGTYVGTLDAGGFAGRDARVPF-HDVFLHGLV 536

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               G K+SKS GN IDP++ ++  G DALR+ L R    G D
Sbjct: 537 RDDHGRKMSKSKGNGIDPLDWVDRFGADALRFTLARGANPGSD 579



 Score = 37.4 bits (85), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 24/139 (17%)

Query: 5   EKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIA 59
           +K   S  +  PN     H+GHA +  + D L R  R+ G +VL+  G D  G   Q I 
Sbjct: 46  DKPAYSVVLPPPNVTGSLHMGHALDHTLMDTLTRRKRMQGYEVLWLPGMDHAGIATQTIV 105

Query: 60  K---AAQNAG---VTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +   AA+  G   +    F+D+  +             R + D +D S D F  T ++  
Sbjct: 106 EKQLAAEGTGREELGRDEFIDRVWKWKAESGGTIQGQMRRLGDGVDWSRDRF--TMDEGL 163

Query: 103 HDTCRILWKKISDKGDIYK 121
               + ++K++ D G IY+
Sbjct: 164 SRAVQTIFKRMYDDGLIYR 182


>gi|312216960|emb|CBX96909.1| hypothetical protein [Leptosphaeria maculans]
          Length = 725

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 14/201 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + Y+     YP+   H+GH     I+DVLAR+  + G  VL   G D  G     AA
Sbjct: 71  DRGEAYVLPMFPYPSGTLHLGHLRVYTISDVLARYKHMQGYKVLHPIGWDAFGLPAENAA 130

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD-----DFIRTTEKRHHDTCRILWKKISDKG 117
              GV  + +  QN    +    V+   +D       +RT +   +   + ++  + ++G
Sbjct: 131 IERGVHPEKWTLQNIEAMKAQMHVMGGRWDWDSLAQELRTCDPDFYKHTQRIFLMLHERG 190

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      Y   D+    +++V   A+G  + +     + M ++ +F ++  +Q+ LL
Sbjct: 191 LAYQAESLVNYDPVDKTVLANEQV--DANGCSWRSGAKVEKVMLKQ-WFLKIKEFQEPLL 247

Query: 178 SYYES------HPEFILPIER 192
              ++       PE +L ++R
Sbjct: 248 KDLDALAKDGRWPEKVLAMQR 268


>gi|297243418|ref|ZP_06927351.1| leucyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888665|gb|EFH27404.1| leucyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 994

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 15/129 (11%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 66  RPSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH---DTCRILWKKISDKGDI 119
              G   ++  + N  N R     + +S+DD      +R     DT  + W +      I
Sbjct: 126 VQTGQHPRITTEANIANMRRQLHRMGLSFDD------RRSFATIDTNYVRWTQW-----I 174

Query: 120 YKGCYSGWY 128
           +   Y  WY
Sbjct: 175 FSKLYDAWY 183


>gi|227830519|ref|YP_002832299.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227456967|gb|ACP35654.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 944

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  RSKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RRMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D    T   F   ++ + S    +   I ++M+   +  A  +++ +  S++D YF  
Sbjct: 683 SLDNY--TEDTFGFPEKWLSSRIYEITTNITKHMEALELRDAANELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VNA-EGRRANNKLLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|161702947|ref|YP_303130.2| isoleucyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 1107

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + I +    ++  F+LS    N P       HG +L  +G+K+SK L N 
Sbjct: 585 YFPADF--ITEYIAQTRGWFYTLFILSTALFNKPPFINCICHGVVLDTQGQKLSKRLNNY 642

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGL 346
            DP+E+  + G DA+R+ ++   +  G D   DK+G+
Sbjct: 643 ADPMEIFNQYGSDAMRFLMLSHTVLYGGDLLLDKEGV 679


>gi|14601141|ref|NP_147669.1| leucyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|6919981|sp|Q9YD97|SYL_AERPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|5104685|dbj|BAA80000.1| leucyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 959

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          R K +I+    Y NA PH+G A+ ++  D++AR+ R+ G +VLF  G    G  I  +A
Sbjct: 29 RRKFFITFPYPYVNAYPHLGSAFTILRVDIMARYKRMRGYNVLFPQGWHATGGPIVSSA 87



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 27/228 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+ + GKD++  H +++  F  +A  P    P+ +  +G++L  GEK+SKS GN I
Sbjct: 588 WYPLDMRISGKDLIPNHLVFF-IFHHTAIFPRELWPRAIGVNGWVLVAGEKMSKSKGNFI 646

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  G DA R+    E+  G D   D    +  V    A+   +L+S+ +  + +
Sbjct: 647 LLRQALDWWGADATRWA---EVLAGADSGLDDANFEPSV----ADSAVSLLSQWLDFVRE 699

Query: 372 DYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           +Y      P    E   D    S  +  +  +   M+      AL +    + E  R   
Sbjct: 700 NYG----RPARREERWVDRWFESRLNSTIARVTRLMEEANFKTALVEAWYKLQESYR--- 752

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               W L+++  +    +L   +EV     +L+  F P  A + ++ +
Sbjct: 753 ----WYLRRSGGEPREDLLRRFIEV---QTLLIAPFAPHTAEEAWEAM 793


>gi|328675587|gb|AEB28262.1| Isoleucyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 935

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ ++ +         D  K   +PADL++ G D  R  F      A     + P  
Sbjct: 531 VWFDSGSSSMCIL------DIDKNLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+VF+HGF++ + G K+SKSLGNV  P ++   +G D LR +
Sbjct: 584 KEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLW 625



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   H+GHA   I+ D++ +   L G D  F    D HG  I
Sbjct: 48  REKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFIPTWDCHGLPI 102


>gi|227114256|ref|ZP_03827912.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 921

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K+PD     + VW D+ + + +         G  A     D+++ G D  R  F +   
Sbjct: 509 VKVPD----TLDVWFDSGSTHASVVDVRPEFGGHAA-----DMYLEGSDQHRGWFMSSLM 559

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +  +    P  ++V +HGF +  +G K+SKS+GN + P +V+ ++G D LR ++     
Sbjct: 560 ISTAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWIGSTDY 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV- 393
            G+    D+  + KR +AD    I N    +   +L + +G  P   +    D  +L   
Sbjct: 619 SGEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPQKDSVKPEDMVVLDRW 671

Query: 394 ---CSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C++  Q EI E  ++   HR + +++   S
Sbjct: 672 AVGCAKAAQEEILEAYESYDFHRVVQRLMQFCS 704


>gi|223043614|ref|ZP_03613659.1| leucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443102|gb|EEE49202.1| leucyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 804

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNAD 353
            EK+SKS GNVI+P +++   G D LR +      L   IA  ++G    DG ++     
Sbjct: 574 NEKMSKSKGNVINPDDIVSSHGADTLRLYEMFMGPLDAAIAWSENGL---DGSRR----- 625

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                   + R   +I+ + DG +        +D+S+  V ++ ++++ E+      + A
Sbjct: 626 -------FLDRVWRLIVTE-DGSLNNK-IVESNDKSLDKVYNQTVKKVTEDFDALSFNTA 676

Query: 414 LAQVISLVSEVDRYFDAQKPW 434
           ++Q++  +++  +  +  KP+
Sbjct: 677 ISQLMVFINDCYKANEIYKPY 697


>gi|330995666|ref|ZP_08319564.1| isoleucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574725|gb|EGG56286.1| isoleucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 1140

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 10/99 (10%)

Query: 256 WPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           +PAD    G D  R      HAI    F   A     K V S+G +L K G K+SK LGN
Sbjct: 640 YPADFIAEGVDQTRGWFFTLHAISTMVFDSVAY----KAVISNGLVLDKNGNKMSKRLGN 695

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +DP   IE+ G DA+R++++   +   +  +D+ G+++
Sbjct: 696 AVDPFGAIEQYGSDAVRWYMITNSSPWDNLKFDEAGVQE 734


>gi|327403387|ref|YP_004344225.1| Isoleucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318895|gb|AEA43387.1| Isoleucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 1208

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+ ++  A +   ++   K V S+G +L K G K+SKS GN 
Sbjct: 705 KSYPADFIAEGVDQTRGWFYTLHAIATMCFDSVAF-KNVMSNGLVLDKNGLKMSKSKGNS 763

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP E + + G DA R++++       +  +D DG+ +
Sbjct: 764 VDPFETLTKYGPDATRWYMITNAQPWDNLKFDTDGITE 801


>gi|269122525|ref|YP_003310702.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616403|gb|ACZ10771.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 926

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VWID+ T++        N         PADL++ G D  R  F +    +   + + 
Sbjct: 532 IMDVWIDSGTSHRAVLSTRKNLQR------PADLYLEGSDQHRGWFQSSLLTSVASTGDA 585

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + +HGF    +G K+SKSLGN + P E+I + G D LR ++ 
Sbjct: 586 PY-KSILTHGFANDAQGRKMSKSLGNQMFPSEIINQYGADILRLWVA 631



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 27/54 (50%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +K  +     Y N   H+GHA   I+ D++ R+ RL G D  +  G D HG  I
Sbjct: 50  KKFILHDGPPYANGDLHVGHAENKILKDIIMRYKRLRGYDAPYVPGWDTHGLPI 103


>gi|332045107|gb|EGI81300.1| isoleucyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 1134

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 10/101 (9%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 632 KSFPADFIAEGVDQTRGWFYTLHAIGTMVFDSVAY----KNVVSNGLVLDKNGQKMSKRL 687

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           GN  DP E ++  G DA R++++       +  +D DG+++
Sbjct: 688 GNATDPFETLDTYGADATRWYMIANANPWDNLKFDLDGIEE 728


>gi|260435959|ref|ZP_05789929.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413833|gb|EEX07129.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 875

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E+   +  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     
Sbjct: 47  VAEKPGFFALSMFPYPSGSLHMGHVRNYVITDVIARVQRMRGHAVLHPMGWDAFGLPAEN 106

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           AA    V    + D+N    R   D L +S D        R   TC
Sbjct: 107 AAIERNVDPGEWTDRNIDQMRAQLDRLGLSID------WSREQATC 146



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 21/179 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        +  
Sbjct: 633 EKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLWR 690

Query: 361 LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           LV    + I    D + P   P   +++D  +       ++ + E++ N++      Q+ 
Sbjct: 691 LVEAGAARI----DSLEPMHRPADLSDADSGVRRALHLAIKAVSEDLSNEI------QLN 740

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +SE+ +  +A     +  T  D  S    V  E +  L  LL  F P LA + +  L
Sbjct: 741 TAISELMKLSNA-----ISSTGIDDLSGP--VLQEALSGLVRLLAPFAPHLAEEFWSRL 792


>gi|227876926|ref|ZP_03995022.1| leucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850182|ref|ZP_05555612.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047820|ref|ZP_06020770.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|227863483|gb|EEJ70906.1| leucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256713154|gb|EEU28145.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260571877|gb|EEX28448.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 804

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKS 306
           K+ P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS
Sbjct: 518 KWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKS 577

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VI+E G D+LR + +          +D +G                + R  
Sbjct: 578 KGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVW 628

Query: 367 SMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            + + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   
Sbjct: 629 RLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAAQ 688

Query: 426 R 426
           +
Sbjct: 689 K 689



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           Y+      +S        ++EV  G    G Y   + N  QWM       +++AY
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGYPVYRKNMRQWM------LKMTAY 196


>gi|145589920|ref|YP_001156517.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048326|gb|ABP34953.1| Isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 953

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+      +L    P  K + +HGF +  +G K+SKS+GNVI P 
Sbjct: 581 ADLYLEGSDQHRGWFHSSLLTGAMLDGKPPY-KALLTHGFTVDGQGRKMSKSVGNVIAPQ 639

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V +++G + +R ++      G+    D+  + KRV       I N + R +   L D+D
Sbjct: 640 QVADKLGAEIIRLWVASTDYSGEMTISDE--ILKRVTESYRR-IRNTL-RFLLANLSDFD 695

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
                +P    + E D   L++ +++ +++  + +      A+A+++S  SE
Sbjct: 696 HAKHAMPV-DQWLEIDRYALALANQLQEDVEAHYKAYEFQPAVARMLSFCSE 746



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 16/131 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------- 58
           K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I       
Sbjct: 52  KFILHDGPPYANGDIHIGHAVNKILKDMIVKSRWLMGFDSAYVPGWDCHGMPIEIQIEKQ 111

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                  A+    A    +V +D+  ++F  +  VL    + ++    +   D  R L  
Sbjct: 112 FGKNLPTAEVQAKARAYAQVQIDKQKKDFERLG-VLGDWNNPYLTMNFRNEADEIRAL-G 169

Query: 112 KISDKGDIYKG 122
           KI +KG +++G
Sbjct: 170 KIWEKGYVFRG 180


>gi|75674290|ref|YP_316711.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|123773340|sp|Q3SWI2|SYL_NITWN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74419160|gb|ABA03359.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 883

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYMRARGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  K +   N +  +     + +S D
Sbjct: 93  ERKIAPKAWTYDNIKAMKKQLRSIGLSLD 121



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 29/47 (61%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G++
Sbjct: 629 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQ 675


>gi|256819432|ref|YP_003140711.1| isoleucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581015|gb|ACU92150.1| isoleucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 1135

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 256 WPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK LGN
Sbjct: 635 YPADFIAEGVDQTRGWFYTLHAIATSVFDSVAY----KNVVSNGLVLDKNGQKMSKRLGN 690

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            +DP   I E G DA R++++       +  +D +G+
Sbjct: 691 AVDPFTTIAEYGADATRWYMISNANPWDNLKFDLEGV 727


>gi|194578813|ref|NP_001124133.1| valyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|190337268|gb|AAI63242.1| Si:ch211-152p11.2 protein [Danio rerio]
          Length = 1057

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 126/321 (39%), Gaps = 77/321 (23%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIY 274
            I +  DP  ++  W  +        G+   P  +K   +F+P  +   G D++ F    
Sbjct: 560 AITLTQDPD-VLDTWFSSGLFPFAMLGW---PQQTKDLTQFYPNSILETGSDLIFF---- 611

Query: 275 WPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE--------- 318
           W A +      L+  LP  K+V  H  +  K G K+SKSLGNVIDP++VI          
Sbjct: 612 WVARMVMLGTELTGQLPF-KQVLFHSLVRDKYGRKMSKSLGNVIDPLDVISGVSLERLQE 670

Query: 319 ----------------------------EVGVDALRYFLVREIACGKD-GFYDKDGLKKR 349
                                       E G DALR+ L    A G+D        L  R
Sbjct: 671 KVKEGNLDPRESIVAIEAQKKDFPKGIPECGTDALRFALCSYRAQGEDISLSMSHVLSCR 730

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQ 408
                 N +   V  +++ +    D  +PTP A T    S+   +CSR+   ++E  Q  
Sbjct: 731 ---HFCNKMWQTVRFTLATL---NDASLPTPLAETYPLSSMDKWICSRLYSTVKECEQGF 784

Query: 409 LIHRALAQVISLVS-----EVDRYFDAQKPWELKKTNPDR------ASTVLYVTVEVIRQ 457
             +       +L S       D Y ++ KP    +   +R      A++VLY +V V   
Sbjct: 785 ESYELYTVTSALHSFWLHCLCDVYLESIKPLLKPEGCEERVGERQVATSVLYHSVSV--S 842

Query: 458 LAILLQAFVPKLANKIFDILF 478
           LA LL  F+P L  +++  L 
Sbjct: 843 LA-LLSPFMPFLTEELWQRLL 862



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)

Query: 8   YISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + S  I  PN     H+GHA  + I D LAR+ R+ G  VL+  G D           +A
Sbjct: 125 HFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCD-----------HA 173

Query: 66  GVTTKVFVDQNSRNFRDMADV-LDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           G+ T+  V++  +  R+      D S ++F++            +W   ++KGD
Sbjct: 174 GIATQSVVER--KLLREQGKSRQDFSREEFLKQ-----------VWMWKNEKGD 214


>gi|111018328|ref|YP_701300.1| valyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817858|gb|ABG93142.1| valine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 902

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 9/115 (7%)

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           VF HG +  + G+K+SKS GN IDP++ ++  G DALR+ L R    G D    +D    
Sbjct: 541 VFLHGLVRDQFGKKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGED---- 596

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEI 401
             +A  +      +  +    L +     P PG    T++D  IL    +V  E+
Sbjct: 597 --HAQSSRNFATKLFNATKFALMNGAAPAPLPGRDQLTDADRWILDRLEQVRGEV 649


>gi|268560176|ref|XP_002646150.1| C. briggsae CBR-VRS-2 protein [Caenorhabditis briggsae]
          Length = 1048

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 12/103 (11%)

Query: 248 PDGSKAK--FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           PD +K    F+P+ +   G DIL F    + + A  L+  LP  K++  H  I    G K
Sbjct: 581 PDNTKDMDLFFPSAVLETGHDILFFWVARMVFMAQELTGKLPF-KEILLHAMIRDAHGRK 639

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
           +SKSLGNVIDP++VI  V ++ L+  L+      +EIA  K G
Sbjct: 640 MSKSLGNVIDPLDVIRGVTLEGLQAQLLSGNLDEKEIAVAKAG 682



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 11/63 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D + RF+R+ G   LF  G D           +AG+ T+V V++  +  
Sbjct: 131 HVGHALATTVEDTITRFNRMHGKRTLFNPGCD-----------HAGIATQVVVEKRLKRE 179

Query: 81  RDM 83
           R +
Sbjct: 180 RGL 182


>gi|203284634|ref|YP_002222374.1| valyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201084077|gb|ACH93668.1| valyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 877

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P    V   DI+ F    W A ++ A L    +V F   +I       KG+K+SKSLG
Sbjct: 475 YYPTTTLVTAYDIIFF----WVARMVMAGLEFMGEVPFRDIYITPLLRDKKGQKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD-KDGLKKRVNADLANGIGNLVSRSVS 367
           N IDP+++IE+ G DALR+ L      G+D   D KD +     A  AN + N    +  
Sbjct: 531 NGIDPLKIIEQYGSDALRFTLSFLSVQGQDLNIDTKDFM---FGAKFANKVFN----ASK 583

Query: 368 MILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
            IL +  G ++     F + D+ +++  +  +  I  + +N   + A   V         
Sbjct: 584 FILSNLKGRLVLDSLEFDDIDKWLITRLNATVAVIDWSFENYKYNEATKAVYEFFWNDFC 643

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  K   L   + D  +  +   +  +++  +++  F+P +  +I+
Sbjct: 644 DWYIEISKI-NLCSDDFDLQNITISKLIFFLKESLLIMHPFIPFITEEIY 692



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 13/100 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D+L R+ R+ G + L+  GTD           +AG+ T+   ++  R  
Sbjct: 52  HMGHALNFTLQDILVRYKRMKGFNTLWLFGTD-----------HAGIATQTVFEKQLREL 100

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               D  D S ++FI    +  +   +I+  ++   G  Y
Sbjct: 101 GKSKD--DFSREEFIEGIFELKNKHRKIIVNQVEKLGASY 138


>gi|148887442|sp|Q4A5K5|SYI_MYCS5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144575172|gb|AAZ43966.2| Ile-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 897

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 28/279 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  + +       + DG K    P D+++ G D  R  F++    A   +   
Sbjct: 523 IMDVWFDSGVSSIAV-----DIDGGKTTL-PFDVYLEGNDQFRGWFNSSVINAVAYAGVS 576

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P    V SHGF L  +G+K+SKS  NV+DP++VI++ G D LR ++       ++   + 
Sbjct: 577 PYINLV-SHGFALDGQGKKMSKSRNNVVDPLDVIKKYGADILRLWVANSEYSSDVHISES 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                  + +++   +   +GNL +         YD  +         +E + SV   VL
Sbjct: 636 ILVQNSEIYRKIRNTVKFLLGNLNNFK-------YDKDLKLTSIHHYINEELKSVKKEVL 688

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQ 457
           +   +     +I      VI L S    YF   K    ++K N +    VL    E++  
Sbjct: 689 ENYDKFRFINVIKVLNRYVIDLSS---FYFSVTKDILYIRKENDEERQMVLKNFYEILDF 745

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           L + L   +P  A++++   +   EN+      +RL+  
Sbjct: 746 LMLALAPIIPTTADEMYS--YFNKENKKESLFLERLEKA 782



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKIA 59
           E+  +     Y N   H+GHA   I+ D++ R+  L G    F  G D HG     + + 
Sbjct: 50  ERFVVHDGPPYANGDIHVGHALNKILKDIIVRYKSLQGYYSPFVPGWDTHGLPIEHKMLT 109

Query: 60  KAAQNAGVTTKVFVDQNSRNF--------RDMADVLDISYDDFIR---TTEKRHHDTCRI 108
           ++  +    T   + + SRN+        +     L + + DF +   T +K +      
Sbjct: 110 ESKLDRDQITVELLRKKSRNYALKQIEHQKKQFQKLQL-FSDFSKIYITLDKSYEAKQLK 168

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++KK++  G +YKG    ++S   ++   + EV
Sbjct: 169 VFKKLALDGLVYKGLKPIYWSPSSQSALAEAEV 201


>gi|114319716|ref|YP_741399.1| valyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226110|gb|ABI55909.1| valyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 917

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 113/294 (38%), Gaps = 54/294 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ D  +  +  F+P  + V G DI+ F    W A ++   L  
Sbjct: 445 VLDTWFSSALWPFSTLGWPDETEALRT-FYPTSVLVTGFDIIFF----WVARMIMMGLHF 499

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEV-------------------- 320
              +P ++++ HG +    G+K+SKS GNV+DP+++IE +                    
Sbjct: 500 MDDVPFREIYIHGLVRDPDGQKMSKSKGNVLDPLDIIEGIELEELVAKRTSGLMQPQMAK 559

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+        G+D  +D    +   N    N I N  +
Sbjct: 560 RIEKATRKQFPDGIPAHGTDALRFTFASLATTGRDVVFDLGRAEGYRN--FCNKIWN-AA 616

Query: 364 RSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R V M  + +D G+       T +D  I+S   R    +RE +    +  A   +   + 
Sbjct: 617 RYVLMNTEGHDTGVAAEDVKLTVADRWIISQLQRTELRVREALDGYRLDLAAQAIHEFIW 676

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   D Y +  KP   +  +P          V V+  +  L    +P +   ++
Sbjct: 677 DEYCDWYLELSKPVLNQSDDPALLRGTRRTLVRVLEAVLRLTHPIMPFITEAVW 730


>gi|313140763|ref|ZP_07802956.1| valyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133273|gb|EFR50890.1| valyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 924

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 532 IMDTWATSSLTPQIVTRWEEPDEASKALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLEN 591

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + IE+ G DA+RY+       G D
Sbjct: 592 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNKPIEQFGADAVRYWAA-AARLGLD 647

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD+  +K  +R+   L N 
Sbjct: 648 ATYDEGQMKIGRRLAIKLLNA 668



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R+ G DV +  G D++G    +
Sbjct: 57  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMQGYDVFYPMGWDDNGLPTER 116

Query: 61  AAQN---AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
             QN     V T +  D + +   +  D   I   D +  + K   + C  L
Sbjct: 117 RVQNYYGVRVDTSLKYDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKL 168


>gi|290994685|ref|XP_002679962.1| predicted protein [Naegleria gruberi]
 gi|284093581|gb|EFC47218.1| predicted protein [Naegleria gruberi]
          Length = 648

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 42/85 (49%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          Y+ +   YP+   H+GH     I+D++AR H++ G +V+   G D  G     AA   GV
Sbjct: 13 YVLSMFPYPSGNLHMGHVRVYTISDLIARTHKMLGYNVIHPFGFDAFGLPAENAAIERGV 72

Query: 68 TTKVFVDQNSRNFRDMADVLDISYD 92
          +   +  +N  + ++    LD  +D
Sbjct: 73 SPADWTHKNIAHMKEQIKALDFDFD 97


>gi|283783403|ref|YP_003374157.1| leucine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441765|gb|ADB14231.1| leucine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 994

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 15/129 (11%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 66  RPSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH---DTCRILWKKISDKGDI 119
              G   ++  + N  N R     + +S+DD      +R     DT  + W +      I
Sbjct: 126 VQTGQHPRITTEANIANMRRQLHRMGLSFDD------RRSFATIDTNYVRWTQW-----I 174

Query: 120 YKGCYSGWY 128
           +   Y  WY
Sbjct: 175 FSKLYDAWY 183


>gi|228470963|ref|ZP_04055808.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
 gi|228307360|gb|EEK16374.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
          Length = 1137

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
            K +PAD    G D  R  F  ++  A +   ++   + V  +G +L K G K+SK LGN
Sbjct: 639 GKVFPADFIAEGVDQTRGWFFTLHAIATMTQGSIAF-RNVLVNGLVLDKDGNKMSKRLGN 697

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +DP  VI++ G D LR++++      ++  +D  G+++
Sbjct: 698 AVDPFGVIQQYGSDPLRWYMITNANPWENIRFDPKGVEE 736


>gi|146305988|ref|YP_001186453.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166229758|sp|A4XQV5|SYI_PSEMY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145574189|gb|ABP83721.1| Isoleucyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 943

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 230 VWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T +   L  +  L +  G +A     DL++ G D  R  FH+       +  + 
Sbjct: 536 VWFDSGTTHWHVLRGSHGLGHTTGPRA-----DLYLEGSDQHRGWFHSSLLTGSAIDGHA 590

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + +HGF++   G K+SKSLGNV+ P EV + +G D +R ++ 
Sbjct: 591 PY-KALLTHGFVVDENGRKMSKSLGNVVAPQEVNDSLGADIMRLWVA 636



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFVLHDGPPYANGSIHIGHAVNKILKDIITRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|71894569|ref|YP_278677.1| isoleucyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 895

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 28/279 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  + +       + DG K    P D+++ G D  R  F++    A   +   
Sbjct: 521 IMDVWFDSGVSSIAV-----DIDGGKTTL-PFDVYLEGNDQFRGWFNSSVINAVAYAGVS 574

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P    V SHGF L  +G+K+SKS  NV+DP++VI++ G D LR ++       ++   + 
Sbjct: 575 PYINLV-SHGFALDGQGKKMSKSRNNVVDPLDVIKKYGADILRLWVANSEYSSDVHISES 633

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                  + +++   +   +GNL +         YD  +         +E + SV   VL
Sbjct: 634 ILVQNSEIYRKIRNTVKFLLGNLNNFK-------YDKDLKLTSIHHYINEELKSVKKEVL 686

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQ 457
           +   +     +I      VI L S    YF   K    ++K N +    VL    E++  
Sbjct: 687 ENYDKFRFINVIKVLNRYVIDLSS---FYFSVTKDILYIRKENDEERQMVLKNFYEILDF 743

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           L + L   +P  A++++   +   EN+      +RL+  
Sbjct: 744 LMLALAPIIPTTADEMYS--YFNKENKKESLFLERLEKA 780



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKIA 59
           E+  +     Y N   H+GHA   I+ D++ R+  L G    F  G D HG     + + 
Sbjct: 48  ERFVVHDGPPYANGDIHVGHALNKILKDIIVRYKSLQGYYSPFVPGWDTHGLPIEHKMLT 107

Query: 60  KAAQNAGVTTKVFVDQNSRNF--------RDMADVLDISYDDFIR---TTEKRHHDTCRI 108
           ++  +    T   + + SRN+        +     L + + DF +   T +K +      
Sbjct: 108 ESKLDRDQITVELLRKKSRNYALKQIEHQKKQFQKLQL-FSDFSKIYITLDKSYEAKQLK 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++KK++  G +YKG    ++S   ++   + EV
Sbjct: 167 VFKKLALDGLVYKGLKPIYWSPSSQSALAEAEV 199


>gi|332022359|gb|EGI62671.1| Valyl-tRNA synthetase [Acromyrmex echinatior]
          Length = 827

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 33/136 (24%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA  +II DVLAR+HR+ G  VL+  G D           +AG+ T+  V++  ++ 
Sbjct: 13  HLGHALTVIIQDVLARWHRMKGHPVLWIPGLD-----------HAGIATQAIVERTLQHT 61

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK------GCYSGWYSLRDEA 134
           R++    D+  D+F            +++W+  ++K  I K      G    W    D  
Sbjct: 62  RNITR-YDMGRDEFT-----------QLIWQWKAEKAAIIKQQLKALGATLDW----DRE 105

Query: 135 YYNDDEVYKGADGQYY 150
           Y+  DE++  +   ++
Sbjct: 106 YFTIDELFNSSKFYFF 121



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 43/202 (21%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           SL+++ +   + +  DP  ++  W  +      T G+ +N +   A+ +P  L   G DI
Sbjct: 372 SLAQEKYGNTVNLRQDPD-VLDTWFSSTVVPFATLGWPENTE-DMARHYPLTLMETGHDI 429

Query: 268 LRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVG 321
           L F    W A ++  +L L      K+V  HG +    G+K+SKS GNVI P  +I    
Sbjct: 430 LMF----WVARMVMLSLELTQRLPFKEVLLHGVLCDGNGKKMSKSSGNVISPENIINGCT 485

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMI 377
            + L                          A L++  G L    + R++ +  K Y   I
Sbjct: 486 FEELNE-----------------------QARLSHAAGILSAEELQRTLRVNTKTYSMGI 522

Query: 378 PTPGAFTESDESILSVCSRVLQ 399
           P  GA    D   LS+C+R ++
Sbjct: 523 PDCGA----DALRLSLCARNIK 540


>gi|317507547|ref|ZP_07965266.1| leucyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254148|gb|EFV13499.1| leucyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 947

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE  ++     YP+    H+GH    I  DVLARF R+ G +VL T G D  G      A
Sbjct: 47  REPFFVMDMFPYPSGDGLHVGHPLGFIATDVLARFQRMAGKNVLHTMGFDSFGLPTEIYA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G+      ++N   F      L + +D+  R  T++  ++   + ++ KI       
Sbjct: 107 VQTGIHPATVTERNIGRFLAQIRRLGLGHDERRRFATSDPDYYRWTQWIFLKI------- 159

Query: 121 KGCYSGWYSLRDE 133
              Y+ WY  RD+
Sbjct: 160 ---YNAWYD-RDQ 168


>gi|311695364|gb|ADP98237.1| leucyl-tRNA synthetase [marine bacterium HP15]
          Length = 861

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 23/243 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++    L   Y  D  + T +  ++   +  + ++ +KG +YK
Sbjct: 92  ANKTAPAKWTYANIEYMKNQLKQLGFGYDWDRELATCKPDYYRWEQWFFARLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P QW      F R++ Y ++LL+
Sbjct: 152 KMSTVNWDPVDQTVLANEQVVDGRGWRSGALVEQKKIP-QW------FIRITDYAEELLN 204

Query: 179 ---YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIMYVW 231
                E  PE +  ++R        KS   +L+   K  D G+ +    PD    + Y+ 
Sbjct: 205 DLDQLEDWPEQVKTMQRN----WIGKSEGTELTFPLKDRDSGLTVYTTRPDTLMGVSYMA 260

Query: 232 IDA 234
           + A
Sbjct: 261 VAA 263


>gi|308183515|ref|YP_003927642.1| isoleucyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065700|gb|ADO07592.1| isoleucyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 920

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 52/247 (21%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY+   + W+ L DE +  +D    G+         N ++ +E     F  S+ +++L +
Sbjct: 409 IYRAT-TQWFILMDEPFMQND----GSQKTLREVALNAIERVE-----FVPSSGKNRLKT 458

Query: 179 YYESHPEFILPIERR-------------------NEVISFV-------------KSGLKD 206
             E+ P++ L  +R+                   +EV+  V             +S +KD
Sbjct: 459 MIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHVANLFEKEGCDVWWESSVKD 518

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L     ++    K  +   +I+ VW D+ + +      L++  G K +  P+D+ + G D
Sbjct: 519 LL--PPSYQDNAKHYEKVMHILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSD 572

Query: 267 ILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVD 323
             R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D
Sbjct: 573 QHRGWFQSSLLIGCILNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSD 631

Query: 324 ALRYFLV 330
            +R ++ 
Sbjct: 632 VVRLWVA 638


>gi|301630146|ref|XP_002944188.1| PREDICTED: leucyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 908

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 6/180 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA 
Sbjct: 32  KKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    +     + ++ D    + T +  ++   + L+ ++ +KG  Y+
Sbjct: 92  KNKVPPAQWTYDNIACMKGQMQAMGLAIDWSREVATCDPDYYRWNQWLFLRMLEKGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ +      V+  E  GY+ +++ Y  +LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLKITDYAQELLDHVQ 207


>gi|257460821|ref|ZP_05625922.1| isoleucyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442152|gb|EEV17294.1| isoleucyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 919

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           I+ VW D+ + +      L +      KF PAD+++ G D  R    +  + LLS   N 
Sbjct: 537 ILDVWFDSGSTW---KAVLQSGAYDAGKF-PADMYLEGSDQHR--GWFQSSLLLSCAINE 590

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P K + +HGF +  KG+K+SKS+GNV+ P EV +  GV+ LR ++ 
Sbjct: 591 CAPYKSILTHGFTVDEKGQKMSKSVGNVVYPQEVAKSHGVEILRLWVA 638



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-----KAAQNAGVTT 69
           Y N   HIGHA   I+ D++ + H   G D+ +  G D HG  I      K  +     +
Sbjct: 60  YANGHLHIGHALNKILKDIITKTHYFFGEDIRYVPGWDCHGLPIEQQVEIKLGERKKSLS 119

Query: 70  KV------------FVDQNSRNFRDMADVLDISYDD 93
           KV            F+D     F+DM  + D  +DD
Sbjct: 120 KVQIRELCRQHAKEFIDVQRNEFKDMGILGD--WDD 153


>gi|228475068|ref|ZP_04059796.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|228271053|gb|EEK12441.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
          Length = 916

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY------ 226
           L  +Y  + + I+  E  N V    +    ++   R+  D    G   P  P        
Sbjct: 463 LPVFYAENGDIIMTKETVNHVADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKET 522

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
            IM VW D+ +++    G L+         +PADL+  G D  R  F++    A      
Sbjct: 523 DIMDVWFDSGSSH---RGVLET---RPELHFPADLYFEGSDQYRGWFNSSITTAVATREQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFVMDGEGKKMSKSLGNVIVPNQVVKQKGADIARLWV 622



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D++ R+  + G    +  G D HG  I +A    GV   K+ +
Sbjct: 58  YANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIEQALTKKGVDRKKMSI 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A + +++   DF R            T K  ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|72162555|ref|YP_290212.1| leucyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123760769|sp|Q47MY0|SYL_THEFY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71916287|gb|AAZ56189.1| leucyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 830

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 31/233 (13%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL----SANLPLPK---KVFSHGFILHKGEKISK 305
           AK+ P D +V G +    H +Y   F         +P  +   ++ + G ++++G+ +SK
Sbjct: 537 AKWGPIDQYVGGVEHAILHLLYSRFFTKVLYDMGMVPFTEPFVRLLNQGQVINQGKAMSK 596

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG-NLVSR 364
           SLGN +D  + I+  GVDA+R  +V      +D  +          AD++ G     ++R
Sbjct: 597 SLGNGVDLGQEIDRYGVDAVRLTMVFAGPPEEDIDW----------ADVSPGASVKFLNR 646

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +  ++ +      P     T  D ++  +  + L ++ E ++ Q  + A+A+++ LV+  
Sbjct: 647 AYRVMAEAAAASAPGVDPAT-GDLALRRMTHQTLAKVTEAVEAQRFNVAIARIMELVTAA 705

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            R  D         + P  A   +    EVI   AI L  F P +A + +++L
Sbjct: 706 RRAID---------SGPGAADPAVREAAEVI---AITLGLFAPYVAEEGWEML 746



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 22/201 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + Y+     YP+   H+GHA    I DV+AR+H   G +VL   G D  G      A+
Sbjct: 43  RPRRYVLDMFPYPSGDLHMGHAEAFAIGDVIARYHFARGENVLHPIGWDSFGLP----AE 98

Query: 64  NAGVT--------TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
           NA +         T   ++  + +FR  A  LD S    + T++  ++   +  + +  +
Sbjct: 99  NAAIKHNFHPAEWTYTNIETQAESFRRYAISLDWSRR--LHTSDPEYYRWNQWFFLRFFE 156

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G  Y+      +  +D+    +++V +G            V+      ++F+++ Y  +
Sbjct: 157 RGLAYRKDGLVNWCPKDQTVLANEQVIQGK----CERCGTEVERRALNQWYFKITDYAQR 212

Query: 176 LLSYYES----HPEFILPIER 192
           LL   E      PE +L ++R
Sbjct: 213 LLDDMEQLEGKWPERVLTMQR 233


>gi|255036395|ref|YP_003087016.1| leucyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949151|gb|ACT93851.1| leucyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 969

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 9/128 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  K Y+     YP+ A  H+GH    I +D+ +R+ RL G +VL   G D  G    + 
Sbjct: 30  ELPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLKGFNVLHPMGFDSFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G    +  +QN   + +    L +SYD      E R  D     W +      I+ 
Sbjct: 90  AIQTGQHPAITTEQNISRYIEQLKNLGLSYD---WNREVRTSDPGYYKWTQW-----IFS 141

Query: 122 GCYSGWYS 129
             ++ WY+
Sbjct: 142 ELFNSWYN 149


>gi|84995376|ref|XP_952410.1| isoleucyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302571|emb|CAI74678.1| isoleucyl-tRNA synthetase, putative [Theileria annulata]
          Length = 1129

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)

Query: 221 PDDPQY--------IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR-- 269
           P  P+Y        I   W ++ +  L    Y  +N D     F PA+    G D  R  
Sbjct: 579 PRGPEYPPLRRIPEIFDCWYESGSMPLAKIHYPFENKDSLDQHF-PANFIAEGLDQTRGW 637

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           F+ +   + LL    P  K V  +G IL   G+K+SK L N  DP+++I + G D+LR F
Sbjct: 638 FYTLMVLSTLLFNKSPF-KNVIVNGLILASDGKKMSKRLKNYPDPLDIINQFGADSLRLF 696

Query: 329 LVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           L+   A   +   +  D ++   K V     +    LV       +      +P P A  
Sbjct: 697 LISSPAVKAEPVRFSTDSVRNVLKDVILPWFHSYRFLVQEVTRYEVTHKIKFVPDPEAPF 756

Query: 385 ES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           +S    D  I ++   ++  +   M+N  ++  + +++S + ++  ++       ++ T 
Sbjct: 757 KSSCVMDRWIYTITQELIYSVHHEMENYKLYNVMPKLLSFLEQLTNWYIRINRERMRGTF 816

Query: 441 PDRASTV----LYVTVEVIRQLAILLQAFVPKL 469
            D    V    L+ +++    L  +   F  ++
Sbjct: 817 GDEECVVSLQSLFTSLKTFNHLMSMFAPFTSEM 849


>gi|332158573|ref|YP_004423852.1| valyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034036|gb|AEC51848.1| valyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 891

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 19/264 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG-SKAKFW-----PADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +   G  +AK W     P  L   G DI+R  A Y     +
Sbjct: 453 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 VLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTAL-APPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD++            D  ILS   R++
Sbjct: 572 HPFKWEIVD--YNFRFLQKVWN-IYRFAERHIKDFEYEKYKDIELEPLDRWILSRLHRII 628

Query: 399 QEIRENMQN---QLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +   E ++     LI R L   I    EV D Y +  K + +   + +          E+
Sbjct: 629 KFATEELERYRFNLITRELMTFIW--HEVADDYIEMVK-YRIYGDDEESKLKARVTLYEL 685

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +  + +LL  FVP +  +++  +F
Sbjct: 686 LYNIMLLLAPFVPHITEELYQNIF 709



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 9  ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV 67
          I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG     K  +  G+
Sbjct: 38 IDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELKVEKEFGI 97

Query: 68 T 68
          T
Sbjct: 98 T 98


>gi|331090720|ref|ZP_08339568.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399989|gb|EGG79645.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 807

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK Y      YP+    H+GH    +I+D  +R+  L G  ++   G D  G      
Sbjct: 32  QREKYYCLDMFPYPSGNGLHVGHWRGYVISDAWSRYKLLQGHYIVHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   V  ++N +NF+   + +   YD D  + TT+   +   + ++ K+  +G  
Sbjct: 92  AIKMGVHPSVSTEENIKNFKKQLNEISALYDWDMEVNTTDPAFYKWTQWIFVKMFKEGLA 151

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E   N      G +      + N  QWM       R++ Y 
Sbjct: 152 YEKEFPINWCPSCKTGLANEEVVNGKCERCGTE----VTKKNLRQWM------LRITKYA 201

Query: 174 DKLLS 178
           D+LL+
Sbjct: 202 DRLLN 206



 Score = 44.7 bits (104), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 107/230 (46%), Gaps = 42/230 (18%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLL---SANLPLP-KKVFSHGFILHK-GEKISKSLG 308
           P D+++ G +    H +Y   +  FL    + +   P KK+F+ G I  K G K+SKS G
Sbjct: 530 PVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAVDFDEPFKKLFNQGMITGKNGIKMSKSKG 589

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV+ P +++ + G D+LR + +       D  +D  G+         +G+   ++R  ++
Sbjct: 590 NVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVYRFLNRVWNL 640

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRY 427
           ++   D       A  ++ + ++ + ++++ +I   +++     +L  V+S   E  ++ 
Sbjct: 641 VMDSKD-------ADVKATKEMIKIRNKMVYDITTRLES----FSLNTVVSGFMEYNNKL 689

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K    K+   D+         E +   AILL  F P +A ++++ L
Sbjct: 690 LDIAK----KEGGVDK---------ETLGTFAILLAPFAPHMAEELWEQL 726


>gi|326436748|gb|EGD82318.1| valyl-tRNA synthetase 2 [Salpingoeca sp. ATCC 50818]
          Length = 996

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 62/302 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------ 279
           ++  W  +    ++  G+ DN PD    KF+P DL   G DIL F    W A +      
Sbjct: 588 VLDTWFSSGIFPISIFGWPDNTPD--LQKFYPGDLLETGYDILFF----WVARMVMMCTY 641

Query: 280 LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV---------------------- 316
           L+  LP  K V+ H  I  K G K+SKS GNVIDP +V                      
Sbjct: 642 LTGKLPF-KDVYLHPIIRDKEGVKMSKSRGNVIDPTDVCTGITLEGLHERLAQGNLDPRE 700

Query: 317 ---------------IEEVGVDALRYFLVREIACGKDGFYDKD---GLKKRVNADLANGI 358
                          I+E GVDALR+ L   +  G+D   D +   G +   N  + NG+
Sbjct: 701 IERAKELQKRQFPQGIKECGVDALRFTLCALVTPGRDINLDVNRIFGYRTFCNK-VYNGV 759

Query: 359 GNLVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             ++S+        +Y  ++   G  +E D  +LS  S  ++++ + ++   +  +   +
Sbjct: 760 KLVMSKLGPDFKPAEYGKLL---GDESELDLWMLSRLSTCIRDMNKQLEEYDLVGSTTSI 816

Query: 418 --ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + L    + Y +  KP         R +TV  V   V      LL  F+P L  +++ 
Sbjct: 817 YNLWLYEFCNFYLEVVKPVFQDDQYKHRRNTVQNVMYTVAESGLRLLSIFMPFLCEELWQ 876

Query: 476 IL 477
            L
Sbjct: 877 RL 878


>gi|254459318|ref|ZP_05072739.1| isoleucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083931|gb|EDZ61222.1| isoleucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 919

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 131/300 (43%), Gaps = 42/300 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + + +     +   G     + ADL+V G D  R  F +  + +  +    
Sbjct: 537 ILDVWFDSGSTWNSVLKSRNYDAGE----YQADLYVEGSDQHRGWFQSSLFLSCAVEHKA 592

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF +  KGEK+SKS GNVI P +V++E G + LR ++      G       
Sbjct: 593 PY-KAVLTHGFTVDEKGEKMSKSKGNVIAPEKVLKEYGSEILRLWVASSDYQGD--LKIS 649

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEI 401
           DG+ K+ + +        +  +  ++L + + +  I       E D+ IL+V   V +E+
Sbjct: 650 DGILKQTSENYRK-----LRNTFRIMLANINDLETISAYENMGELDKWILNVAKNVFKEV 704

Query: 402 RE-----------NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +           ++ N  I   L+ +   +++   Y +A       KT+P R ++   +
Sbjct: 705 HKSFTEYNYVNGMSLLNNFIVNELSGMYIDMTKDSLYCNA-------KTDPRRMASQSAM 757

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD---ILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
            + + + L +L+   +   A++I +    +   D    F      ++ G     TFD ++
Sbjct: 758 AI-ITKSLLLLMAPILTYTADEIVENAPAIIKGDAESIFDMTYAEIQAG---ESTFDALY 813



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   ++ D++ + +  DG  V FT G D HG  I +  +
Sbjct: 58  YANGNIHIGHALNKVLKDIIIKRNYFDGKSVRFTPGWDCHGLPIEQQVE 106


>gi|198464541|ref|XP_001353264.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
 gi|198149764|gb|EAL30767.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
          Length = 919

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLS--ANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L S  A    P K +F HGF +  KG K+SKSLGNVI P
Sbjct: 587 ADLYLEGYD--QFTGWFQSSLLTSIAARDCAPYKALFVHGFTVDEKGHKMSKSLGNVISP 644

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G DALR+++ 
Sbjct: 645 KQITKKYGTDALRWWVA 661


>gi|118442963|ref|YP_879112.1| isoleucyl-tRNA synthetase [Clostridium novyi NT]
 gi|166980053|sp|A0Q3B0|SYI_CLONN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118133419|gb|ABK60463.1| isoleucyl-tRNA synthetase [Clostridium novyi NT]
          Length = 1038

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 11/203 (5%)

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +L K G K+SKS GNV+DP +V++  G DA R+      A      + +D +K+    
Sbjct: 581 GHVLDKHGLKMSKSKGNVVDPFDVLQNEGADATRWHFYTASAPWLPTRFSEDDVKETQRK 640

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLI 410
            L+  + N+ S  V     D    +      +E+  D+ ILS  + +++ + E++ N  I
Sbjct: 641 FLST-LWNVYSFYVLYAELDQFNPLEYKDFVSENVMDKWILSKLNTLIKTVEEDLDNYKI 699

Query: 411 HRALAQVISLVSEVDRYF---DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFV 466
             A  ++   V E+  ++   +  + W  + T+    A   LY  +  I ++A     FV
Sbjct: 700 TEAALELEDFVDELSNWYVRRNRSRFWSTELTDDKIGAYKTLYTVLTTIVKVA---APFV 756

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +A +I+  L V  +    +S+
Sbjct: 757 PFMAEEIYQNLVVNLDKDAIESV 779



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N +PH+GH    ++ D++ R+  + G  VL   G D HG
Sbjct: 51 NGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHG 89


>gi|73662315|ref|YP_301096.1| leucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761539|sp|Q49YI8|SYL_STAS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72494830|dbj|BAE18151.1| leucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 804

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G
Sbjct: 514 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLFDLGVVPTKEPFQKLFNQGMILGEG 573

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYF 328
            EK+SKS GNVI+P ++++  G D LR +
Sbjct: 574 NEKMSKSKGNVINPDDIVKSHGADTLRLY 602



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMLGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKENIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ +    DG      H PV     + +  +++ Y D+LL
Sbjct: 150 VDEVAVNWCPALGTVLSNEEVI----DGVSERGGH-PVYRRPMKQWVLKITEYADRLL 202


>gi|72383441|ref|YP_292796.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|84029557|sp|Q46HD5|SYI_PROMT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72003291|gb|AAZ59093.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 967

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 91/232 (39%), Gaps = 63/232 (27%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  +   E +F  +  ++DK LS  E      LP   +N + S V+    D  +SR+   
Sbjct: 434 PTIFRATEQWFASVEGFRDKALSAIED--VIWLPESGKNRINSMVRE-RGDWCISRQR-T 489

Query: 216 WGIKIP----DDPQYIMY------------------VWIDALTNYLTTTGYLDNPD---- 249
           WG+ IP     + Q I+                   +W +   + L    YL+  D    
Sbjct: 490 WGVPIPVFYEKNGQEILLNKETISHIADLFSVHGADIWWEYEVSELLPPSYLNQADRWQK 549

Query: 250 -GSKAKFW-------------------PADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
                  W                   PADL++ G D  R  F +    +  ++ + P  
Sbjct: 550 GTDTMDVWFDSGSSWSSVISKKENLNYPADLYLEGSDQHRGWFQSSLLTSVAVNEHAPF- 608

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
           KKV +HGF L   G K+SKSLGN+IDP+ +I            G D LR ++
Sbjct: 609 KKVLTHGFALDENGRKMSKSLGNIIDPLVIINGGSNKKLDPAYGADVLRLWV 660



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   ++ D++ +F  + G  V +  G D HG  I
Sbjct: 69  YANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPI 112


>gi|313206616|ref|YP_004045793.1| isoleucyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445932|gb|ADQ82287.1| Isoleucyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
          Length = 1132

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 634 KAFPADFIAEGVDQTRGWFYTLHAIATSVFDSVAY----KNVVSNGLVLDKNGQKMSKRL 689

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GN +DP + + + G DA R++++      ++  +D DG+
Sbjct: 690 GNAVDPFDTLAKYGPDATRWYMISNANPWENLKFDIDGV 728


>gi|312385678|gb|EFR30111.1| hypothetical protein AND_00481 [Anopheles darlingi]
          Length = 1036

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 13/123 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSAN 283
           ++  W  +     +  G+ DN D  K  F+P  L   G DIL F     +++   LL   
Sbjct: 562 VLDTWFSSGLFPFSVFGWPDNTDDLKL-FYPTTLLETGHDILFFWVARMVFFGQTLL-GK 619

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACG 336
           LP  ++VF H  +    G K+SKSLGNVIDP++VI  + ++ L   L+      RE+   
Sbjct: 620 LPF-REVFLHPMVRDAHGRKMSKSLGNVIDPMDVIMGISLEGLHQQLLDSNLDPREVEKA 678

Query: 337 KDG 339
           K G
Sbjct: 679 KAG 681


>gi|195160211|ref|XP_002020969.1| GL25089 [Drosophila persimilis]
 gi|194118082|gb|EDW40125.1| GL25089 [Drosophila persimilis]
          Length = 949

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLS--ANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L S  A    P K +F HGF +  KG K+SKSLGNVI P
Sbjct: 587 ADLYLEGYD--QFTGWFQSSLLTSIAARDCAPYKALFVHGFTVDEKGHKMSKSLGNVISP 644

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G DALR+++ 
Sbjct: 645 KQITKKYGTDALRWWVA 661


>gi|257076387|ref|ZP_05570748.1| valyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 772

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 20/253 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANL 284
           +M  W    T+ L+ T YL + +  +   +P D    G DI+   A      ++L    +
Sbjct: 439 VMDTW---ATSSLSPTLYLKHIN--QMDLYPMDSRFQGHDIITSWAFTTILRSYLHYGEI 493

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  K V S       G+K+SKS GN+++P  +IE  G DALRY+    +        ++D
Sbjct: 494 PWRKIVISGNVYDPFGQKMSKSKGNIVEPRAIIENYGADALRYWASTTMQGENIKLREQD 553

Query: 345 GLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            ++ R     L N      S  + M+L +      T   F   +  I +   R ++E+ E
Sbjct: 554 LMRGRKTVIKLEN------SLKLIMMLANNKKPGNTIPEFP-VNRWITTKMERTIKEVTE 606

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            M+N  I +A   +         D Y +  K    + +  DR    L     V   +  +
Sbjct: 607 YMENNEIMKARISLDKFFWNEYCDNYLEMIKN---ESSKDDRRDETLSTAFSVFENILKM 663

Query: 462 LQAFVPKLANKIF 474
               +P +  ++F
Sbjct: 664 YSPIMPFITEELF 676


>gi|326434299|gb|EGD79869.1| leucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 991

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 8/104 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYW----PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           F+P D+ V GKD++  H  Y      A         P+   ++G ++  G K+SKS GN 
Sbjct: 575 FYPLDMRVSGKDLIPNHLTYCLYNHVAIWEDNKAMWPRSFRANGHLMLNGAKMSKSTGNF 634

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +   + IE+ G DA R  L    A G DG  D +  +K  NA++
Sbjct: 635 MTLEQCIEKYGTDATRMTL----ADGSDGVDDANFEEKTANANV 674


>gi|296118536|ref|ZP_06837114.1| leucine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968435|gb|EFG81682.1| leucine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 947

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A
Sbjct: 51  KDKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +     N  N R    +L + +D
Sbjct: 111 IQTGTHPRTTTMSNIENMRRQLGMLGLGHD 140


>gi|260753146|ref|YP_003226039.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552509|gb|ACV75455.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 941

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 17/88 (19%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEK 302
           YL+  D  +  F  + L   G    R HA Y             + V +HGF L   G K
Sbjct: 587 YLEGSDQHRGWFQSSLLESCGS---RGHAPY-------------EAVLTHGFTLDGTGRK 630

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNVIDP++VI E G D LR ++ 
Sbjct: 631 MSKSVGNVIDPLKVINESGADILRMWVA 658



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E+  +     Y N   HIGHA   I+ D++ R   L G DV +  G D HG  I   
Sbjct: 57  KGAERFILHDGPPYANGDIHIGHALNKILKDIIMRSQTLLGKDVPYIPGWDCHGLPIEWK 116

Query: 62  AQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFIRTTEKR 101
            +      K+ VD+  N+  FR       + + D  R   KR
Sbjct: 117 VEEQFRKKKLNVDKDVNAVEFRQECRKYAVHWVDTQRQEFKR 158


>gi|157136115|ref|XP_001663660.1| valyl-tRNA synthetase [Aedes aegypti]
 gi|108870043|gb|EAT34268.1| valyl-tRNA synthetase [Aedes aegypti]
          Length = 931

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 20/116 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKS 306
           +++P DL   G DIL     +W A +      L+  LP   K+  HG I    G K+SKS
Sbjct: 496 RYYPLDLMETGHDIL----FFWVARMVMLGQELTGQLPF-GKILLHGIICDENGRKMSKS 550

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREI-ACGKDGFYDKDGLKKRVNAD---LANGI 358
           LGNVI P +VI+   ++ L     +E+ A  K G      LKK V+       NGI
Sbjct: 551 LGNVIKPEQVIKGTSLEKLN----QEVEAAHKQGVLSASELKKSVSGQKKMFPNGI 602


>gi|58261734|ref|XP_568277.1| leucine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134118365|ref|XP_772196.1| hypothetical protein CNBM1150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254804|gb|EAL17549.1| hypothetical protein CNBM1150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230450|gb|AAW46760.1| leucine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1114

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 15/112 (13%)

Query: 233 DALTNYLTTTGYL--DNP-DGSKAK--------FWPADLHVIGKDILRFHAIYWPAFLLS 281
           D +  Y+   G L  D+P D  KA         F+P D+   GKD++  H  +W  +  +
Sbjct: 668 DEVWEYVLADGQLPADSPVDAEKAAQLKYHFNYFYPLDVRSSGKDLIPNHLTFW-VYCHA 726

Query: 282 ANLP---LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A  P    PK V ++G ++  G+K+SKS GN +   E  ++ G DA+R  L 
Sbjct: 727 ALFPEKHWPKAVRANGHLMLNGKKMSKSTGNFLTMKEATKKYGSDAMRLTLA 778


>gi|327266386|ref|XP_003217987.1| PREDICTED: valyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 983

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 120/303 (39%), Gaps = 66/303 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +        G+  N +  K +F+P  L   G D+L F    W A +      L
Sbjct: 502 VLDTWFSSGLFPFAALGWPHNTEDLK-QFYPNGLLETGSDLLFF----WVARMVMLGKQL 556

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE--------------------- 318
           +  LP   +VF H  +    G K+SKSLGNVIDP++VI                      
Sbjct: 557 TGELPF-SQVFLHTMVRDAHGRKMSKSLGNVIDPLDVIHGAPLQILQEKLRSSNLDPREV 615

Query: 319 ----------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD-LANGIGNL 361
                           E G DALR+ L    A G     D   ++   NA+   N + N 
Sbjct: 616 AIAVEGQRRDFPQGIPECGTDALRFALCTYFAQGNGINLDVATVE---NANRFCNKVWNA 672

Query: 362 VSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQV-- 417
           +  +++ + + ++ + P    F  S  D+ ILS C     +     +   +H   + V  
Sbjct: 673 LKFTLAALGEGFNPLDPEE-VFPNSPMDKWILSRCYHTAVDCAHWFEKYELHSVASSVHL 731

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             L    D Y ++ KP  L+  +P R       LY +V+V  +   LL  F+P L  +++
Sbjct: 732 FWLCDFCDVYLESVKP-ILRSGDPTRLLVTRQTLYSSVDVALR---LLSPFMPFLTEELW 787

Query: 475 DIL 477
             L
Sbjct: 788 QRL 790



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S +I  PN     H+GHA  + I D L R+ R+ G  VL+  G+D           +AG+
Sbjct: 60  SLSIPPPNVTGSLHLGHALTVAIEDALVRWKRMQGYKVLWVPGSD-----------HAGI 108

Query: 68  TTKVFVDQN 76
            T+V V++ 
Sbjct: 109 ATQVVVEKK 117


>gi|310288126|ref|YP_003939385.1| Valyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309252063|gb|ADO53811.1| Valyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 913

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 521 IMDTWATSSLTPQIVTRWEEPDEASKALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLEN 580

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + IE+ G DA+RY+       G D
Sbjct: 581 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNKPIEQFGADAVRYWAA-AARLGLD 636

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD+  +K  +R+   L N 
Sbjct: 637 ATYDEGQMKIGRRLAIKLLNA 657



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMQGYDVFYPMGWDDNGLPTER 105

Query: 61  AAQN---AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
             QN     V T +  D + +   +  D   I   D +  + K   + C  L
Sbjct: 106 RVQNYYGVRVDTSLKYDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKL 157


>gi|254883243|ref|ZP_05255953.1| valyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319642618|ref|ZP_07997264.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254836036|gb|EET16345.1| valyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317385706|gb|EFV66639.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 875

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKG 597

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             + D    I  P     + E   S+ ++   E+ +      +  AL  V  L      +
Sbjct: 598 WEVAD----IAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAVYKL------F 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
           +D    W L+   P     +   T E        L  LL  F+P +  +++  ++
Sbjct: 648 WDEFSSWYLEMIKPTYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEELWQHIY 702


>gi|325285818|ref|YP_004261608.1| leucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321272|gb|ADY28737.1| leucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 1017

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           ++EK Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    Q 
Sbjct: 29  DKEKFYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHQGFNVLHPMGYDSFGLPAEQY 88

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             +  Q+  +TTK  +++    +R+  D +  S+D
Sbjct: 89  AIQTGQHPAITTKTNINR----YREQLDKIGFSFD 119


>gi|227504037|ref|ZP_03934086.1| valyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199367|gb|EEI79415.1| valyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 941

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           DP  ++  W  +     +T G+ +  PD    KF+P ++ V   DIL F       F   
Sbjct: 485 DPD-VLDTWFSSALWPFSTLGWPEKTPD--LEKFYPTNVLVTAYDILFFWVARMMMFGTF 541

Query: 282 ANLPLPK-------------------KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVG 321
           A +  P+                    ++ HG +   +G K+SKSLGN IDP++ + + G
Sbjct: 542 AGVQTPELLNAGDGSARDGRPQIPFHDIYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYG 601

Query: 322 VDALRYFLVREIACGKD 338
            DALR+ L R    G D
Sbjct: 602 ADALRFTLARGANPGVD 618


>gi|59711018|ref|YP_203794.1| valyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81311020|sp|Q5E7U0|SYV_VIBF1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|59479119|gb|AAW84906.1| valyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 957

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 118/305 (38%), Gaps = 66/305 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+ +N D  K  F P+++ V G DI+ F    W A ++      
Sbjct: 472 VLDTWFSSALWTFGTQGWPENTDALKT-FHPSEVLVSGFDIIFF----WVARMIMMTMHF 526

Query: 281 ----SANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEV------------------ 316
                 N  +P K V+  G I    G+K+SKS GNV+DPI++                  
Sbjct: 527 VKDEEGNAQVPFKTVYMTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMM 586

Query: 317 -------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                              IE  G DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 587 QPQLAKKIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNK 644

Query: 358 IGNLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQLIH 411
           + N  SR V M  +++D  +           F+ +D+ I S      +E   ++ N  + 
Sbjct: 645 LWN-ASRYVLMNTEEHDCGMSLSAEERANMEFSLADKWIESQFELAAKEFNAHLDNYRLD 703

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   +   +     D Y +  KP   K T   + +T  Y+ + V+ +   L    +P +
Sbjct: 704 MAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQQAT-RYMLITVLEKTLRLAHPVLPYI 762

Query: 470 ANKIF 474
              I+
Sbjct: 763 TESIW 767


>gi|306824242|ref|ZP_07457612.1| valine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|304552445|gb|EFM40362.1| valine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
          Length = 929

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR---FHAIYWPAF 278
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R   F ++   A 
Sbjct: 518 QDIMDTWATSSLTPQIVTRWEEPGEENRAIFNATFPMDLRPQGQDIIRTWLFSSVD-RAH 576

Query: 279 LLSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           L +  LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       
Sbjct: 577 LENKCLPWANATLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARL 632

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPT----PGAFTES-D 387
           G D  YD+  +K  +   LA  + N    ++++  +D +   G   T    P   TE  D
Sbjct: 633 GLDATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAAATASWNPADVTEPLD 690

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRAL 414
            + ++  + V+ E  +N+ N    +AL
Sbjct: 691 RAAMAKMAHVVSEATKNLNNYEHSKAL 717



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     D++ARF R++G DV +  G D++G    +
Sbjct: 45  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDIIARFKRMNGFDVFYPMGWDDNGLPTER 104

Query: 61  AAQN---AGVTTKVFVDQN--------SRNFRDMADVLDISYDDFIRTTEK 100
             QN     V T +  D N             D  D + IS  +FI   EK
Sbjct: 105 RVQNYYGVRVDTSLKYDPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEK 155


>gi|315497182|ref|YP_004085986.1| leucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315415194|gb|ADU11835.1| leucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 855

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + D++ARF R  G +VL   G D  G     AA
Sbjct: 33  DKPKYYVLEMFPYPSGRIHMGHVRNYAMGDLVARFKRARGFNVLHPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G+  K +   N  + +     L +S D
Sbjct: 93  MERGIHPKGWTYDNIASMKAQLQRLGLSID 122


>gi|303290709|ref|XP_003064641.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453667|gb|EEH50975.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 977

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 20/115 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++            ++   +PAD+++ G D  R  F +        +   P
Sbjct: 536 MDVWFDSGSSWAGVCK-------ARGLNYPADMYLEGSDQHRGWFQSSLLTGVAAAGQAP 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             K + +HGF+L  KG K+SKSLGNVIDP  VIE           G D LR ++ 
Sbjct: 589 Y-KTILTHGFVLDEKGYKMSKSLGNVIDPRLVIEGGKNQKQDPAFGADTLRLWVA 642



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 22/44 (50%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          Y N   HIGHA   I+ D + R+  L G  V F  G D HG  I
Sbjct: 44 YANGDLHIGHALNKILKDFVCRYEALKGKRVRFVPGWDCHGLPI 87


>gi|171742062|ref|ZP_02917869.1| hypothetical protein BIFDEN_01166 [Bifidobacterium dentium ATCC
           27678]
 gi|283456811|ref|YP_003361375.1| valyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171277676|gb|EDT45337.1| hypothetical protein BIFDEN_01166 [Bifidobacterium dentium ATCC
           27678]
 gi|283103445|gb|ADB10551.1| valyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 929

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR---FHAIYWPAF 278
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R   F ++   A 
Sbjct: 518 QDIMDTWATSSLTPQIVTRWEEPGEENRAIFNATFPMDLRPQGQDIIRTWLFSSVD-RAH 576

Query: 279 LLSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           L +  LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       
Sbjct: 577 LENKCLPWASATLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARL 632

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPT----PGAFTES-D 387
           G D  YD+  +K  +   LA  + N    ++++  +D +   G   T    P   TE  D
Sbjct: 633 GLDATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAAATASWNPADVTEPLD 690

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRAL 414
            + ++  + V+ E  +N+ N    +AL
Sbjct: 691 RAAMAKMAHVVSEATKNLNNYEHSKAL 717



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     D++ARF R++G DV +  G D++G    +
Sbjct: 45  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDIIARFKRMNGFDVFYPMGWDDNGLPTER 104

Query: 61  AAQN---AGVTTKVFVDQN--------SRNFRDMADVLDISYDDFIRTTEK 100
             QN     V T +  D N             D  D + IS  +FI   EK
Sbjct: 105 RVQNYYGVRVDTSLKYDPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEK 155


>gi|258615786|ref|ZP_05713556.1| isoleucyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 795

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ S    +PAD+++ G D  R  F++    +  ++   
Sbjct: 385 IMDVWFDSGSSHEAV--LRQRPELS----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 438

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN+I P +VI++ G D LR ++
Sbjct: 439 PY-KSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV 483


>gi|261345125|ref|ZP_05972769.1| valine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566813|gb|EFB72348.1| valine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 964

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ DN +  K  F P D+ V G DI+ F    W A ++   +  
Sbjct: 485 VLDTWFSSGLWTFSTLGWPDNTEALKT-FHPTDVLVSGFDIIFF----WIARMIMMTMHF 539

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I   +G+K+SKS GNVIDP+++I+ +              
Sbjct: 540 IKDENGEPQVPFKTVYMTGLIRDEEGQKMSKSKGNVIDPLDMIDGISLEALLEKRTGNMM 599

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 600 QPQLAEKIAKRTRKEYPDGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 657

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +  D G      +F+ +D  I++  +  ++  RE + +     A   
Sbjct: 658 LWN-ASRFVLMNTEGQDCGQNGGEMSFSLADRWIMAQFNHTVKVYREALDSHRYDIAAGI 716

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 717 LYDFTWNEFCDWYLELSKP-AVHKGNEAQVRAARFTLIEVLEGLLRLAHPIIPFITETIW 775



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+ TGTD           +AG+ T++ V++
Sbjct: 62  HMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTD-----------HAGIATQMVVER 105


>gi|224283612|ref|ZP_03646934.1| valyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 913

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 521 IMDTWATSSLTPQIVTRWEEPDEASKALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLEN 580

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + IE+ G DA+RY+       G D
Sbjct: 581 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNKPIEQFGADAVRYWAA-AARLGLD 636

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD+  +K  +R+   L N 
Sbjct: 637 ATYDEGQMKIGRRLAIKLLNA 657



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMQGYDVFYPMGWDDNGLPTER 105

Query: 61  AAQN---AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
             QN     V T +  D + +   +  D   I   D +  + K   + C  L
Sbjct: 106 RVQNYYGVRVDTSLKYDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKL 157


>gi|163787206|ref|ZP_02181653.1| isoleucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877094|gb|EDP71151.1| isoleucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 1134

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 256 WPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
           +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK LGN
Sbjct: 634 FPADFIAEGVDQTRGWFYTLHAIGTMVFDSVAY----KNVVSNGLVLDKNGQKMSKRLGN 689

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
             DP E + + G DA R++++       +  +D DG+
Sbjct: 690 ATDPFETLSKYGADATRWYMIMNANPWDNLKFDSDGI 726


>gi|19553839|ref|NP_601841.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391480|ref|YP_226882.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|24418686|sp|Q8NMD7|SYC_CORGL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21325413|dbj|BAC00035.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326821|emb|CAF21303.1| CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 460

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 119/325 (36%), Gaps = 69/325 (21%)

Query: 14  AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           A P + PHIGH    +  D+L R+    GLDV F     +   KI   A   G     +V
Sbjct: 31  ATPQSSPHIGHVRSAVAFDILRRWLMAKGLDVAFVRNVTDIDDKILTKASENGRPWWEWV 90

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR--HHDTCRILW-KKISDKGDIYKGCYSGWYSL 130
               R F    + L +       +TE R   H T  I + +++ D G  Y          
Sbjct: 91  STYEREFTWTYNTLGV----LPPSTEPRATGHVTQMIKYMQRLIDNGFAYA--------- 137

Query: 131 RDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            D + Y D   +  A+G  Y +   N V+ ME+                           
Sbjct: 138 VDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQ--------------------------- 170

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGY 244
                E  +F K G +D +L      W    P +P +    W D    +        T Y
Sbjct: 171 ----GEPDNFGKRGPQDFAL------WKAAKPGEPSWPT-PWGDGRPGWHLECSAMATYY 219

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L        +F   D+H  G D+   H     A   +A          + ++   GEK+S
Sbjct: 220 LGE------QF---DIHCGGLDLQFPHHENEIAQAHAAGDKFANYWMHNHWVTMAGEKMS 270

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFL 329
           KSLGNV+   E++++V    LRY+L
Sbjct: 271 KSLGNVLAVPEMLKQVRPVELRYYL 295


>gi|159902802|ref|YP_001550146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|254782425|sp|A9BDK6|SYI_PROM4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|159887978|gb|ABX08192.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 969

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 24/143 (16%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           F +S L   SL+ ++  W   +       M VW D+ +++ + +   D         +PA
Sbjct: 532 FDESKLLPPSLASESHHWQKGVD-----TMDVWFDSGSSWASVSCQRDELG------YPA 580

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIE 315
           DL++ G D  R  F +    +  ++ + P  KKV +HGF L   G K+SKSLGN+IDP  
Sbjct: 581 DLYLEGTDQHRGWFQSSLLTSVAVNGHAPY-KKVLTHGFALDENGRKMSKSLGNIIDPTV 639

Query: 316 VIE---------EVGVDALRYFL 329
           +I            G D LR ++
Sbjct: 640 IINGGTNKKTDPAYGADVLRLWV 662



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   ++ D++ +FH + G  V F  G D HG  I
Sbjct: 69  YANGALHMGHALNKVLKDIINKFHIMRGHKVHFVPGWDCHGLPI 112


>gi|325280528|ref|YP_004253070.1| Valyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312337|gb|ADY32890.1| Valyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 874

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 32/236 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P +  V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 483 YYPTNDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 537

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGIGNLVSRS 365
           GN  DP+++I++ G D +R  ++     G D  +D+   ++  N    + N    + S  
Sbjct: 538 GNSPDPLDLIDKYGADGVRVGMLLCAPAGGDLLFDESLPEQGRNFTTKMWNAFKLVKSWE 597

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           V+ I +     +             L   + +L ++ E +  Q     +++ +  V    
Sbjct: 598 VASIDQPAHSRLA------------LEWFNHLLGKVNETLNTQFDQYRISEALMTVYTTF 645

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDIL 477
           R  D    W L+   P     +   T E    V  QL  LL  F+P +  +I+  L
Sbjct: 646 R--DEFSSWLLEMIKPAYGQPIDRKTYEETLNVFEQLLQLLHPFMPFITEEIWQTL 699


>gi|315657203|ref|ZP_07910087.1| leucine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492306|gb|EFU81913.1| leucine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 973

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  REK +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 51  LARREKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    +   +N  N       + +S+D
Sbjct: 111 QYALQTGQHPAITTHENIANMSKQLARIGLSHD 143


>gi|315022110|gb|EFT35139.1| isoleucyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335943|gb|ADZ12217.1| Isoleucyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 1132

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 634 KAFPADFIAEGVDQTRGWFYTLHAIATSVFDSVAY----KNVVSNGLVLDKNGQKMSKRL 689

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GN +DP + + + G DA R++++      ++  +D DG+
Sbjct: 690 GNAVDPFDTLAKYGPDATRWYMISNANPWENLKFDIDGV 728


>gi|313680038|ref|YP_004057777.1| isoleucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152753|gb|ADR36604.1| Isoleucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 1051

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           Y++ VW D+ +       +        A+ +PAD    G D  R  F++++    +L  +
Sbjct: 523 YVIDVWYDSGSMPFAQHHHPFENREVFARSFPADFISEGIDQTRGWFNSLHQLGTMLFDS 582

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +   K V  HG +L   G K+SKS GNV+DP  +I E G DALR+++
Sbjct: 583 VAF-KNVICHGLMLDEAGLKMSKSRGNVVDPWSIISEFGADALRWYV 628


>gi|260574448|ref|ZP_05842452.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259023344|gb|EEW26636.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 907

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGYSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N  + R     L +S D   +F  T +  ++   + ++  +   G +Y
Sbjct: 91  ERGGHPKTWTYGNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQAMFIDMMAAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +      +   D     +++V  G  G   NA    V+  E   +FFR+S Y  +LL+
Sbjct: 150 RKAAVVNWDPVDHTVLANEQVIDG-RGWRSNAL---VERRELTQWFFRISDYSGELLA 203


>gi|254567113|ref|XP_002490667.1| Mitochondrial leucyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238030463|emb|CAY68387.1| Mitochondrial leucyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328351053|emb|CCA37453.1| leucyl-tRNA synthetase (EC:6.1.1.4) [Pichia pastoris CBS 7435]
          Length = 880

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 2/120 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+Y  T   YP+   H+GH     I+DV+ RF+R+ G DV+   G D  G     AA 
Sbjct: 33  KSKVYNLTMFPYPSGMLHLGHLKVYTISDVVTRFNRMKGYDVIHPMGWDAFGLPAENAAV 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V   V+   N    +   ++   D  ++  + T +  ++   + ++  + + G  Y+
Sbjct: 93  ERKVNPAVWTTSNISKMKAQMEMFLADFDWERCVTTCDPSYYKWTQKIFLLLHEHGLAYR 152


>gi|238060260|ref|ZP_04604969.1| leucyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882071|gb|EEP70899.1| leucyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 956

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+     YP+ A  H+GH    I  D  AR+ R+ G +VL   G D  G    + A 
Sbjct: 67  EKLYVLDMFPYPSGAGLHVGHPLGYIGTDCFARYQRMAGRNVLHAMGFDAFGLPAEQYAV 126

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   +QN   ++     L +++DD
Sbjct: 127 QTGTHPRTTTEQNIARYKTQLRRLGLAHDD 156


>gi|149201526|ref|ZP_01878500.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144574|gb|EDM32603.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 895

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 29  ETRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKIATGHNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A  +G   K +   N  + R     L +S D   +F  T +  ++   + L+    + G 
Sbjct: 89  AMASGGHPKDWTYANIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLEHGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +Y K     W  +      N+  +    DG+ + +  + V+  E   +FFR+S + + LL
Sbjct: 148 VYRKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAD-VERRELTQWFFRISDHAEDLL 202

Query: 178 SYYES 182
              ++
Sbjct: 203 EALDT 207


>gi|186476349|ref|YP_001857819.1| valyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184192808|gb|ACC70773.1| valyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 957

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 22/150 (14%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYW 275
           G+K  +D   ++  W  +     ++ G+ D+ PD S   F P+ + V G DI+ F    W
Sbjct: 461 GLKRDED---VLDTWFSSALVPFSSLGWPDHTPDLSA--FLPSSVLVTGFDIIFF----W 511

Query: 276 PAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            A ++      +  +P    V+ HG +   +G+K+SKS GN +DPI++++ +G+DA    
Sbjct: 512 VARMVMMTTHFTGKVPF-DTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDA---- 566

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGI 358
           LV +   G         ++K+   +  NGI
Sbjct: 567 LVAKRTTGLMNPKQASTIEKKTRKEFPNGI 596



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 56  HMGHAFNQTIMDGLTRYHRMLGENTLWVPGTD-----------HAGIATQIVVERQ 100


>gi|115613243|ref|XP_795172.2| PREDICTED: similar to Vars protein, partial [Strongylocentrotus
           purpuratus]
 gi|115934144|ref|XP_001180042.1| PREDICTED: similar to Vars protein, partial [Strongylocentrotus
           purpuratus]
          Length = 677

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNV 310
           A F+P  L   G DI+ F         L+ N  LP  +V+ H  +    G K+SKSLGNV
Sbjct: 223 AAFYPGTLLETGHDIIFFWVARMVMMSLTLNDVLPFTEVYLHAMVRDAHGRKMSKSLGNV 282

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI+ + ++ L   L +    G     + +  KK    D  NGI    + ++   L
Sbjct: 283 IDPVDVIKGITLEELHKILEQ----GNLDPKEVEKAKKGQKEDYPNGIPECGTDALRFAL 338

Query: 371 KDY 373
             Y
Sbjct: 339 CAY 341


>gi|56551219|ref|YP_162058.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|81820925|sp|Q5NQQ7|SYI_ZYMMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56542793|gb|AAV88947.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 941

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 17/88 (19%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEK 302
           YL+  D  +  F  + L   G    R HA Y             + V +HGF L   G K
Sbjct: 587 YLEGSDQHRGWFQSSLLESCGS---RGHAPY-------------EAVLTHGFTLDGTGRK 630

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNVIDP++VI E G D LR ++ 
Sbjct: 631 MSKSVGNVIDPLKVINESGADILRMWVA 658



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E+  +     Y N   HIGHA   I+ D++ R   L G DV +  G D HG  I   
Sbjct: 57  KGAERFILHDGPPYANGDIHIGHALNKILKDIIMRSQTLLGKDVPYIPGWDCHGLPIEWK 116

Query: 62  AQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFIRTTEKR 101
            +      K+ VD+  N+  FR       + + D  R   KR
Sbjct: 117 VEEQFRKKKLNVDKDVNAVEFRQECRKYAVHWVDTQRQEFKR 158


>gi|50365307|ref|YP_053732.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
 gi|60390693|sp|Q6F0X5|SYL_MESFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50363863|gb|AAT75848.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 801

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 5/177 (2%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ A  H+GH       DV +R+ R++G DVL   G D  G    + A 
Sbjct: 30  KKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSRYKRMNGYDVLHPMGWDAFGLPAEQYAL 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG-DIY 120
             G     F  +N + F+    ++  SY  D  I T    ++   + ++ ++  KG    
Sbjct: 90  KTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEISTANPNYYKITQWIFNQLYKKGLAEN 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W         ND+ + K         +H PV   +   +  +++ Y D+LL
Sbjct: 150 RDVEVNWCQELGTVLANDEIIEKDGLMVSERGEH-PVTKRKMRQWVLKITEYADRLL 205



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 16/114 (14%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIY---WPAFL- 279
           Y+ Y+  D    ++     +D+ +  K   K+ P DL+V G++    H +Y   W   L 
Sbjct: 496 YLAYILADGENEFID----IDSAEAKKRFEKWMPVDLYVGGQEHAVGHLLYARFWNYVLY 551

Query: 280 ----LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                S   P  K++F+ G IL   G K+SKS GNVI+P +++   G D+LR +
Sbjct: 552 DLGITSVKEPF-KQLFNQGMILGPDGRKMSKSWGNVINPDDIVSTHGADSLRLY 604


>gi|15616971|ref|NP_240184.1| valyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219682279|ref|YP_002468663.1| valyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|11134961|sp|P57447|SYV_BUCAI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|25293112|pir||F84972 valine-tRNA ligase (EC 6.1.1.9) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039036|dbj|BAB13070.1| valyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219622012|gb|ACL30168.1| valyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086103|gb|ADP66185.1| valyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311087262|gb|ADP67342.1| valyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
 gi|311087778|gb|ADP67857.1| valyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 955

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  I D+L R+HR+ G +  +  GTD           +AG+ T++ V++     
Sbjct: 48  HMGHAFQQTIMDILIRYHRMQGKNTFWQVGTD-----------HAGIATQILVERQIFE- 95

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           ++     D S DDFI+   +    +  I+ K++   G
Sbjct: 96  KEQKTKKDYSRDDFIKKIWEWKKQSSNIITKQMRRLG 132


>gi|219681724|ref|YP_002468110.1| valyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471423|ref|ZP_05635422.1| valyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|219624567|gb|ACL30722.1| valyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 955

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  I D+L R+HR+ G +  +  GTD           +AG+ T++ V++     
Sbjct: 48  HMGHAFQQTIMDILIRYHRMQGKNTFWQVGTD-----------HAGIATQILVERQIFE- 95

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           ++     D S DDFI+   +    +  I+ K++   G
Sbjct: 96  KEQKTKKDYSRDDFIKKIWEWKKQSSNIITKQMRRLG 132


>gi|294506347|ref|YP_003570405.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294342675|emb|CBH23453.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 1080

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 10/133 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           ++PD    ++ VW D+         Y  +N D  +A F PAD    G D  R  F++++ 
Sbjct: 525 RVPD----LIDVWFDSGAMPYAQWHYPFENEDDFEANF-PADFIAEGVDQTRGWFYSLHA 579

Query: 276 PAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A ++   +   + V  +G +L + G K+SKS+GN ++P EVI++ G D +R+F++    
Sbjct: 580 IATVVFDEVAY-ENVVVNGLVLDEDGNKMSKSVGNTVEPFEVIDDYGADVVRWFMMSNAP 638

Query: 335 CGKDGFYDKDGLK 347
             +   + + GL+
Sbjct: 639 PWESIRFSERGLR 651



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 30/187 (16%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFVDQ 75
           N  P I H     I D+  R+  + G  V    G D HG  +  +  +  G+ T+  V++
Sbjct: 52  NGTPGIHHVLARAIKDIFCRYKTMQGYQVDRKAGWDTHGLPVEIEVEEELGLETRAEVEE 111

Query: 76  ------------NSRNFRDMADVLD------ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                       +   ++D+ D L       +  DD   T E  + +T   L K+I ++ 
Sbjct: 112 YGIEKYNAACRESVLEYKDLWDNLTQRMGYWVDLDDPYVTFETDYIETVWWLLKQIEEED 171

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM------EEEGYFFRLSA 171
            +YKG    WYS       +  EV  G     Y    +P  ++      EE  YF   + 
Sbjct: 172 LLYKGHKIQWYSPGSHTVLSSHEVSLG-----YEETQDPSVYIRFPVAGEENTYFLAWTT 226

Query: 172 YQDKLLS 178
               L+S
Sbjct: 227 TPWTLIS 233


>gi|145296638|ref|YP_001139459.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166200145|sp|A4QH41|SYC_CORGB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|140846558|dbj|BAF55557.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 460

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 119/325 (36%), Gaps = 69/325 (21%)

Query: 14  AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           A P + PHIGH    +  D+L R+    GLDV F     +   KI   A   G     +V
Sbjct: 31  ATPQSSPHIGHVRSAVAFDILRRWLMAKGLDVAFVRNVTDIDDKILTKASENGRPWWEWV 90

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR--HHDTCRILW-KKISDKGDIYKGCYSGWYSL 130
               R F    + L +       +TE R   H T  I + +++ D G  Y          
Sbjct: 91  STYEREFTWTYNTLGV----LPPSTEPRATGHVTQMIEYMQRLIDNGFAYA--------- 137

Query: 131 RDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            D + Y D   +  A+G  Y +   N V+ ME+                           
Sbjct: 138 VDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQ--------------------------- 170

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGY 244
                E  +F K G +D +L      W    P +P +    W D    +        T Y
Sbjct: 171 ----GEPDNFGKRGPQDFAL------WKAAKPGEPSWPT-PWGDGRPGWHLECSAMATYY 219

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L        +F   D+H  G D+   H     A   +A          + ++   GEK+S
Sbjct: 220 LGE------QF---DIHCGGLDLQFPHHENEIAQAHAAGDKFANYWMHNHWVTMAGEKMS 270

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFL 329
           KSLGNV+   E++++V    LRY+L
Sbjct: 271 KSLGNVLAVPEMLKQVRPVELRYYL 295


>gi|218767134|ref|YP_002341646.1| valyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|12585347|sp|Q9JX22|SYV_NEIMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|121051142|emb|CAM07413.1| valyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319411341|emb|CBY91752.1| valyl-tRNA synthetase (valine-tRNA ligase; ValRS) [Neisseria
           meningitidis WUE 2594]
          Length = 945

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+  G+D  +  + R     K
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLID--GIDLEKLLVKRTTGLRK 585



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|254796895|ref|YP_003081732.1| isoleucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590131|gb|ACT69493.1| isoleucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 1045

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 40/284 (14%)

Query: 219 KIPDDP---------QYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDIL 268
           K PDDP         + ++  W ++ +       Y  +N +  +  F P+D   I + + 
Sbjct: 507 KNPDDPTGKSSMVRVESVLDCWFESGSMPFAQVHYPFENKEWFEKNF-PSDF--ITEYVA 563

Query: 269 RFHAIYWPAFLLSANL--PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
           +    ++   +LS  L   +P K   +HG IL K G+K+SK L N  DP E+ +E G DA
Sbjct: 564 QTRGWFYTLMVLSVALFDSVPFKNCLAHGVILDKDGKKLSKRLNNYKDPKELFDEYGADA 623

Query: 325 LRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSR---SVSMILKDYDGM--IP 378
           LR+ ++   +  G     DK G       ++   +  L+ +   S       Y     I 
Sbjct: 624 LRFLMLSSSVMNGGTLLIDKGG-------EIIKDVIRLLLKPLYSAYNFFATYANYHSIR 676

Query: 379 TPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
            P    +S    D  ILS      Q+IR  M    I  A   V+S +  ++ ++  ++  
Sbjct: 677 VPNGMNDSANLLDRYILSEYRAFSQKIRNAMDGYHIQSACKNVLSFIDTLNNWY-IRRSR 735

Query: 435 ELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E       +A  VL +V  E+++ +A LL    P  A KI+  L
Sbjct: 736 ERFVAGEQQAFEVLHFVLSEMLKIIAPLL----PMNAEKIWMAL 775


>gi|114705824|ref|ZP_01438727.1| leucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538670|gb|EAU41791.1| leucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 871

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 8/185 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+ + H+GH     + DV+AR+ R  G +V+   G D  G     AA  
Sbjct: 34  EKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAQGFNVIHPMGWDAFGMPAENAAMQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             V    +  +N  + R     + +S D   +F  T +  ++   ++L+    D G  Y+
Sbjct: 94  NKVHPAKWTYENIASMRTQLKSMGLSLDWSREFA-TCDVEYYHRQQMLFLDFLDAGLAYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V    DG+ + +    V+  E   +FF+++ + + LL   +
Sbjct: 153 KKSKVNWDPVDMTVLANEQV---EDGRGWRSGAL-VEQRELTQWFFKITDFAEDLLQALD 208

Query: 182 SHPEF 186
             P +
Sbjct: 209 HLPNW 213



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 6/122 (4%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G +          +  
Sbjct: 627 EKMSKSKKNVVDPEDIIGRFGADTARWFVLSDSPPDRDVIWTEAGAEGAFR--FVQRLWR 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVS +   +     G +  P A    D  I     R    ++ +++    ++A+A++  L
Sbjct: 685 LVSEAAPHVAG--TGAVSDPEAQPGLD--IRKAAHRAAHGVQTDIERLGFNKAVARIHEL 740

Query: 421 VS 422
           V+
Sbjct: 741 VN 742


>gi|328858308|gb|EGG07421.1| hypothetical protein MELLADRAFT_48133 [Melampsora larici-populina
           98AG31]
          Length = 971

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 12/79 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKS 306
           KF+PA L   G DI+ F    W A +      L+  +P   +VF H  I    G K+SKS
Sbjct: 517 KFYPASLLETGWDIIFF----WVAKMTILGVKLTGKMPF-NEVFCHAMIRDAHGRKMSKS 571

Query: 307 LGNVIDPIEVIEEVGVDAL 325
            GNVIDPI+VI+ + +D+L
Sbjct: 572 KGNVIDPIDVIDGISLDSL 590


>gi|323464155|gb|ADX76308.1| leucyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 810

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+L+R+ R+ G +VL   G D  G    + A
Sbjct: 37  QKKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMQGYNVLHPMGWDAFGLPAEQYA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N + F+     L  SY  D  + TT+  ++   + ++ ++  KG  Y
Sbjct: 97  LDTGNDPAEFTKRNIQTFKRQIQELGFSYDWDREVSTTDPEYYKWTQWIFIQLYKKGLAY 156

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
                  W         N++ V   ++   Y     P+ QW+       +++ Y D+LL 
Sbjct: 157 IDEIPVNWCEALGTVLSNEEVVDGVSERGGYPVVRRPMKQWV------LKITEYADRLLE 210

Query: 179 YYES--HPEFILPIER 192
             ++   PE I  ++R
Sbjct: 211 DLDTLDWPESIKDMQR 226



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 36/192 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W   L    + +P     +K+F+ G IL +
Sbjct: 520 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGI-VPTSEPFQKLFNQGMILGE 578

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNA 352
           G EK+SKS GNV++P +++   G D LR +      L   IA  ++G    DG ++    
Sbjct: 579 GNEKMSKSKGNVVNPDDIVRSHGADTLRLYEMFMGPLEASIAWSENGL---DGSRR---- 631

Query: 353 DLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              + +  L V+    +  K  +G  P          ++ +V  + ++++ E+ ++   +
Sbjct: 632 -FLDRVWRLFVTEDSQLTDKVIEGDTP----------ALQTVYHQTVKKVTEDFESLSFN 680

Query: 412 RALAQVISLVSE 423
            A++Q++  ++E
Sbjct: 681 TAISQLMVFINE 692


>gi|293366842|ref|ZP_06613518.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319143|gb|EFE59513.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 916

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PADL+  G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADLYFEGSDQYRGWFNSSITTAVATRGQ 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF +  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 APY-KFLLSHGFFMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|289620721|emb|CBI52731.1| unnamed protein product [Sordaria macrospora]
          Length = 1105

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           F+P D+ V GKD++  H  +W    L  ++ L      PK V ++G +   GEK+SKS G
Sbjct: 690 FYPLDIRVSGKDLIPNHLTFW----LYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTG 745

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           N +   +V+++ G DA R  L    A   DG  D +
Sbjct: 746 NFMTLDDVVKKYGADAARVAL----ADAGDGISDSN 777


>gi|288560840|ref|YP_003424326.1| valyl-tRNA synthetase ValS [Methanobrevibacter ruminantium M1]
 gi|288543550|gb|ADC47434.1| valyl-tRNA synthetase ValS [Methanobrevibacter ruminantium M1]
          Length = 939

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y +   + ILP E +  +   +   L+        F     IP++   ++  W+D+  + 
Sbjct: 459 YCKDCGKVILPKEEQLPIDPTIDKPLEPCQCGCNEF-----IPEED--VLDTWMDSSISP 511

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFI 296
           L+     D P+    + +P+ +   G DI+R  A Y       L+   P    V +    
Sbjct: 512 LSVA---DWPNPGWEEIFPSSIRPQGHDIIRTWAFYTTLRCLALTGQKPFDDIVINGMVF 568

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              G K+SKS GNV  P EVI E G D LR +    +  G D  +D   +K
Sbjct: 569 GEDGYKMSKSRGNVTGPEEVIAEYGADPLRLWAANSVP-GSDVAFDWKNIK 618



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 63/179 (35%), Gaps = 23/179 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R +  I T   YP    H+GH       D  AR+ R  G+DVLF  G D HG       +
Sbjct: 55  RPRYIIDTPPPYPTGLLHMGHILNWAYMDFNARYRREKGMDVLFPQGWDCHGLPTEVKVE 114

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL-------------------DISYDDFIRTTEKRHHD 104
                 K   D     FRDM   L                   D S +    T E R   
Sbjct: 115 ETHNIKK--NDVTRAEFRDMCTELTSHNIELMRGQMRSVGFSQDWSREYITMTPEYRKRT 172

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               L  K+ D+G IY+G +   +  R E      EV    +  + N  + P   + EE
Sbjct: 173 QLSFL--KMYDQGLIYQGIHPVNWCPRCETAIAFAEVEYSENTTFLNYVNFPPADVPEE 229


>gi|209875935|ref|XP_002139410.1| leucyl-tRNA synthetase  [Cryptosporidium muris RN66]
 gi|209555016|gb|EEA05061.1| leucyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 1128

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 33/61 (54%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + REK  I+ A  Y N + H+GHA+    AD  ARF R+ G +VLF  G    G  I  +
Sbjct: 49  QSREKYMITFAYPYMNGRLHLGHAFTFTKADFQARFQRMRGKNVLFPFGFHCTGMPICAS 108

Query: 62  A 62
           A
Sbjct: 109 A 109



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 255 FWPADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           F+P D  V GKD++  H I         W    ++     PK  + +G I+    K+SKS
Sbjct: 704 FYPMDCRVSGKDLIFNHLIMCLYNHVAIWDKSTMADKF-WPKGFYCNGHIMVDSAKMSKS 762

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV 330
           LGN I   + I E   DA R  L 
Sbjct: 763 LGNWITLHDGINEFTSDACRIALA 786


>gi|5932379|gb|AAD56932.1|AF180145_24 isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 941

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 17/88 (19%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEK 302
           YL+  D  +  F  + L   G    R HA Y             + V +HGF L   G K
Sbjct: 587 YLEGSDQHRGWFQSSLLESCGS---RGHAPY-------------EAVLTHGFTLDGTGRK 630

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNVIDP++VI E G D LR ++ 
Sbjct: 631 MSKSVGNVIDPLKVINESGADILRMWVA 658



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E+  +     Y N   HIGHA   I+ D++ R   L G DV +  G D HG  I   
Sbjct: 57  KGAERFILHDGPPYANGDIHIGHALNKILKDIIMRTKPLLGKDVPYIPGWDCHGLPIEWK 116

Query: 62  AQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFIRTTEKR 101
            +      K+ VD+  N+  FR       + + D  R   KR
Sbjct: 117 VEEQFRKKKLNVDKDVNAVEFRQKCRKYAVHWVDTQRQEFKR 158


>gi|255009325|ref|ZP_05281451.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147078|ref|ZP_07809271.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135845|gb|EFR53205.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 1141

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK LGN 
Sbjct: 639 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLGNA 697

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 698 VDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVEGIEE 735


>gi|241760884|ref|ZP_04758973.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374503|gb|EER63964.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 941

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 17/88 (19%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEK 302
           YL+  D  +  F  + L   G    R HA Y             + V +HGF L   G K
Sbjct: 587 YLEGSDQHRGWFQSSLLESCGS---RGHAPY-------------EAVLTHGFTLDGTGRK 630

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +SKS+GNVIDP++VI E G D LR ++ 
Sbjct: 631 MSKSVGNVIDPLKVINESGADILRMWVA 658



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E+  +     Y N   HIGHA   I+ D++ R   L G DV +  G D HG  I   
Sbjct: 57  KGAERFILHDGPPYANGDIHIGHALNKILKDIIMRSQTLLGKDVPYIPGWDCHGLPIEWK 116

Query: 62  AQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFIRTTEKR 101
            +      K+ VD+  N+  FR       + + D  R   KR
Sbjct: 117 VEEQFRKKKLNVDKDVNAVEFRQECRKYAVHWVDTQRQEFKR 158


>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
 gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
          Length = 1102

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 36/225 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G     +      +PADL++ G D  R  F +    +       P
Sbjct: 665 MDVWFDSGSSWAAVLGRRSGLN------YPADLYLEGSDQHRGWFQSSLLTSIATKGKAP 718

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL-----V 330
               V +HGF+L  KG K+SKSLGNV+DP  VIE           G D LR ++      
Sbjct: 719 Y-SSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKSAGGAPAYGADVLRLWVSSVDYT 777

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMILKDYDGMIPTPGAFTESDES 389
            ++  G         + +++   L   +GNL   ++   +  D   MI         D+ 
Sbjct: 778 GDVMIGPQILRQMSDIYRKLRGTLRYLLGNLHDWKADDAVSYDDLPMI---------DKH 828

Query: 390 ILSVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFDAQK 432
            L     V++ IRE+ +N    +   + Q   +V   + YFD  K
Sbjct: 829 ALYQLENVVKNIRESYENYQFFKIFQIIQRFVIVDLSNFYFDVAK 873



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ DV+ R+  L    V F  G D HG  I
Sbjct: 157 YANGDLHIGHAMNKILKDVINRYKILQNYKVHFVPGWDCHGLPI 200


>gi|161870889|ref|YP_001600063.1| valyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161596442|gb|ABX74102.1| valyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 945

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + ++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLEKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|16081220|ref|NP_393519.1| valyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|74544932|sp|Q9HM29|SYV_THEAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10639187|emb|CAC11189.1| valyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 791

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 14/232 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K++P DL   G DI+ F A    A   +    +P  + + S       GEK+SKS GN++
Sbjct: 471 KYYPEDLRGQGHDIISFWAFTTIARSKIHDDRIPWFRIMISGNVYDMYGEKMSKSKGNIV 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           D   +I++ G DALR F    ++ G D    D+D  + R           L+      IL
Sbjct: 531 DIYSMIDKYGADALR-FWASTVSQGDDIRIKDQDFTRGRRTVIKMYNAKKLID-----IL 584

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYF 428
           K    +          +  IL+  SR+++ I  +M N  + +A   + +    V  D Y 
Sbjct: 585 KGDRKIRLFEDVKHPVNRWILTEDSRIMETITTHMDNYEVSKARTALDTFFWNVFCDNYL 644

Query: 429 DAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  KP   K +     D     +Y   +V+  +A      +P +A +I+  +
Sbjct: 645 EMIKPIIQKASAAGDYDTVDETVYTASKVMLDVAKAYAPIMPFIAEEIYQTI 696


>gi|15669137|ref|NP_247942.1| isoleucyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501012|sp|Q58357|SYI_METJA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1591614|gb|AAB98949.1| isoleucyl-tRNA synthetase (ileS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 1039

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 1/44 (2%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           KK   HGF L + G+K+SKSLGNV++P +V+E+ G D LR++L+
Sbjct: 585 KKCLMHGFTLDEHGDKMSKSLGNVVNPDDVVEKYGADLLRFYLL 628



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 3   EREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER K  Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I   
Sbjct: 34  ERNKEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVK 93

Query: 62  AQN-------AGVTTKVFVDQNSRNFRDMA 84
            +N         + TK+ V Q     ++ A
Sbjct: 94  VENEFGIKNKKEIETKIGVKQFIEKCKEFA 123


>gi|297171539|gb|ADI22537.1| valyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0500_09M11]
          Length = 643

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  K  F P D+ V G DI+     +W A ++   L  
Sbjct: 160 VLDTWFSSALWTFSTLGWPEQTEELKT-FHPTDVLVTGFDII----FFWVARMIMMTLKF 214

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 K+V+ HG +   +G+K+SKS GNV+DP+++I+ + +D L
Sbjct: 215 TGQVPFKQVYVHGLVRDAEGQKMSKSKGNVLDPLDLIDGIDLDTL 259


>gi|311086676|gb|ADP66757.1| valyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 910

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  I D+L R+HR+ G +  +  GTD           +AG+ T++ V++     
Sbjct: 48  HMGHAFQQTIMDILIRYHRMQGKNTFWQVGTD-----------HAGIATQILVERQIFE- 95

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           ++     D S DDFI+   +    +  I+ K++   G
Sbjct: 96  KEQKTKKDYSRDDFIKKIWEWKKQSSNIITKQMRRLG 132


>gi|255660361|ref|ZP_05405770.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 756

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 18/121 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNP-----DGSKAK-----FWPADLHVIGKDILRFHAIY--- 274
           M  W  +   YL     + NP     D  +AK     + P DL+V G +    H +Y   
Sbjct: 441 MPQWAGSCWYYLGYLMLIKNPNFWPIDSKEAKKLFDQYLPVDLYVGGAEHAVLHLLYARF 500

Query: 275 WPAFLLSANLPLPK----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           W  FL    L   K    K+ + G +L   G+K+SKS GN I+P  +++  G DALR +L
Sbjct: 501 WHKFLFDKKLVSTKEPFQKLINQGMVLGPDGKKMSKSKGNTINPTPLVDSHGADALRLYL 560

Query: 330 V 330
           +
Sbjct: 561 M 561



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 15  YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+A   H+GH     I DV++R+++  G +V+   G D  G    + A N+      + 
Sbjct: 4   YPSAAGLHLGHVRAYTITDVISRYYKAKGFNVIHPIGFDAFGLPAEQYAINSNQNPGSWT 63

Query: 74  DQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
           DQN  NF +        YD    ++TT+ R++   + ++ ++
Sbjct: 64  DQNINNFINQLTSFGFDYDYHLSLKTTDPRYYKYTQWIFSEL 105


>gi|218263532|ref|ZP_03477613.1| hypothetical protein PRABACTJOHN_03300 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222655|gb|EEC95305.1| hypothetical protein PRABACTJOHN_03300 [Parabacteroides johnsonii
           DSM 18315]
          Length = 875

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 32/265 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN-- 283
           ++  W  +    ++    +++PD  +  ++ P    V G DI+ F    W A ++ A   
Sbjct: 456 VLDTWFSSWLWPISLFNGINDPDNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYE 511

Query: 284 ----LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +P  K V+  G +  K G K+SKSLGN  DP+++IE+ G D +R  L+     G D
Sbjct: 512 YRGKMPF-KNVYFTGIVRDKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMMAAPAGND 570

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +D D L ++   +  N I N        ++K +  D  I  P A   + +       +
Sbjct: 571 IPFD-DALCEQ-GRNFNNKIWNAFR-----LIKGWTVDSTIEQPEAAATAVKWFKMQLDK 623

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTV 452
            + E+ +      +  A+  V  L      ++D    W L+   P     V       T+
Sbjct: 624 TIAEMDDLFGKYRLSEAMMAVYKL------FWDEFSSWYLEMVKPAYGQPVDKSTYLSTL 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
                L  LL  F+P +  +++  L
Sbjct: 678 GFFDALLRLLHPFMPFITEELWQAL 702


>gi|207625|gb|AAA42320.1| transfer RNA-Val synthetase [Rattus norvegicus]
          Length = 594

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 78/282 (27%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL     +W A +      L+  LP  ++V+ H  +    G K+SKSL
Sbjct: 316 FYPGTLLETGHDIL----FFWVARMVMLGLKLTGKLPF-REVYLHAIVRDAHGRKMSKSL 370

Query: 308 GNVIDPIEVIE-------------------------------------EVGVDALRYFLV 330
           GNVIDP++VI                                      E G DALR+ L 
Sbjct: 371 GNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLC 430

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIG-----NLVSRSVSMILKDY-DGMIPTPGAFT 384
              + G+D           +N D+   +G     N +  +    L+    G +P+P +  
Sbjct: 431 AYTSQGRD-----------INLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSKP 479

Query: 385 ESDESILS--VCSRVLQEIRENMQNQLIHRALAQVIS-----LVSEVDRYFDAQKPW--E 435
           E  ES++   + SR+ + +R + +    +   A   +     L    D Y +  KP    
Sbjct: 480 EGHESLVDRWIRSRLAEAVRLSNEGFQAYDFPAVTTAQYSFWLYELCDVYLECLKPVLNG 539

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   D A   LY  ++V  +   LL  F+P +  ++F  L
Sbjct: 540 VDQVAADCARQTLYTCLDVAVR---LLSPFMPFVTEELFQRL 578


>gi|39938670|ref|NP_950436.1| isoleucyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|81402517|sp|Q6YR34|SYI_ONYPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39721779|dbj|BAD04269.1| isoleucyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 900

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T+Y             + +   +D+++ G D  R  F++    +       
Sbjct: 522 IMDVWFDSGTSYSVFK--------KRNQVLQSDVYLEGSDQYRGWFNSSLITSVATQNQA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V +HGF+   +G+K+SKSLGNVIDP+ V E+ G D +R ++
Sbjct: 574 PY-KTVITHGFVFDGEGKKMSKSLGNVIDPLTVAEQKGADIIRLWV 618



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 21/48 (43%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           Y N   H+GHA   I+ D + RF  + G       G D HG  I  A 
Sbjct: 60  YANGNIHMGHALNKILKDFIVRFRSMQGFYTPLIPGWDTHGLPIEAAV 107


>gi|127512032|ref|YP_001093229.1| isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229769|sp|A3QBX2|SYI_SHELP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126637327|gb|ABO22970.1| Isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 940

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + +        +G      P DL++ G D  R  F +    +  ++   P  
Sbjct: 536 VWYDSGSTFSSVVAARPEYNGH-----PVDLYLEGSDQHRGWFMSSLMISTAMNGKAPY- 589

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  +G K+SKS+GNVI P++V  ++G D LR ++ 
Sbjct: 590 KQVLTHGFTVDGQGRKMSKSIGNVIAPLQVTNKLGADILRLWVA 633



 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGH+   I+ D++ +   L G D  +  G D HG        QK+ K  Q   
Sbjct: 59  YANGSIHIGHSVNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGQK-- 116

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           V+   F  Q  R +   A  +D   +DFIR
Sbjct: 117 VSAAEF-RQKCREY--AAAQVDGQREDFIR 143


>gi|328876343|gb|EGG24706.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 979

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 17/179 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y  +   YP+   H+GH     ++D +AR  R+ G DV+   G D  G     AA   
Sbjct: 74  KYYSLSQFPYPSGNLHMGHVRVYTMSDCVARLKRMQGYDVVHPMGWDAFGLPAENAAIEK 133

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V+   + + N    R    +LD+ +D        R   TC   + + +   +I+   Y 
Sbjct: 134 NVSPSKWTNSNIDEMRRQFKLLDLEFD------WNRELSTCDPSYYRWTQ--EIFLRLYR 185

Query: 126 GWYSLRDEAYYNDDEVYKG--------ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              + R  A  N D V           A G+ + + +  V+  E + ++F ++ Y D+L
Sbjct: 186 AGLATRKIAIVNWDPVDNTVLANEQVDATGRSWRS-NAIVERREMKQWYFHITKYADRL 243


>gi|325963645|ref|YP_004241551.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469732|gb|ADX73417.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 873

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 253 AKFWPADLHVIGKDILR---FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
           AK +P D+   G DI+R   F ++   A  L  + P      S   +    +K+SKS GN
Sbjct: 543 AKVFPFDVRPQGHDIIRTWLFSSVV-RADALENSAPWKHAAISGWILDPDRKKMSKSKGN 601

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANG---IGNLVSR 364
           V+ P +V+EE G DA+RY+       G D  Y+   +K  +R+   L N    + NL + 
Sbjct: 602 VVVPTDVLEEYGSDAVRYWAA-SAKLGADTAYEIAQMKIGRRLAIKLLNASKFVLNLGAT 660

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             S++  D   ++  P      D ++L+  S V+ +     +N    RAL    S   + 
Sbjct: 661 ENSVVSDDL-AVLANP-----LDRAVLAQLSEVVAQSTRAFENYDYARALQITESFFWQF 714

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D Y +  K            ++VL      +  L  L   F+P    +++
Sbjct: 715 TDDYVELIKDRAYGAAGEAEQASVLAALATTLDTLLRLFAPFLPFATEEVW 765



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R+++Y I T     +   H+GH +     DVLAR+ R+ G +V +  G D++G    +  
Sbjct: 49  RDQVYSIDTPPPTASGSLHVGHMFSYTQTDVLARYQRMTGKNVFYPMGWDDNGLPTERRV 108

Query: 63  QN 64
           QN
Sbjct: 109 QN 110


>gi|311064999|ref|YP_003971725.1| valyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310867319|gb|ADP36688.1| ValS Valyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 913

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + SKA F   +P DL   G+DI+R    +    A L +
Sbjct: 521 IMDTWATSSLTPQIVTRWEEPDEASKALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLEN 580

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + IE+ G DA+RY+       G D
Sbjct: 581 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNKPIEQFGADAVRYWAA-AARLGLD 636

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD+  +K  +R+   L N 
Sbjct: 637 ATYDEGQMKIGRRLAIKLLNA 657



 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R+ G DV +  G D++G    +
Sbjct: 46  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMQGYDVFYPMGWDDNGLPTER 105

Query: 61  AAQN 64
             QN
Sbjct: 106 RVQN 109


>gi|326790419|ref|YP_004308240.1| leucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541183|gb|ADZ83042.1| leucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 798

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 43/229 (18%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHKGEKISK 305
           K+ P D++V G +    H +Y   +  FL    +     P  K++F+ G +   G K+SK
Sbjct: 520 KWLPVDMYVGGIEHAVLHLLYARFYTKFLFDIGVVDFEEPF-KRLFNQGMVTKAGAKMSK 578

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P E++E+ G D+LR + +       D  +D  G++         G+   +++ 
Sbjct: 579 SKGNVVSPDELVEKYGCDSLRMYELFIGPPELDSEWDDRGIE---------GVYRFLNKV 629

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             ++ ++      T  A T+  E I     +++++I   M+N  ++  ++  +   +E+ 
Sbjct: 630 WKLVDEN------TAVAETKDMERIR---HKLIRDITVRMENFNLNTVVSGFMQYTNEL- 679

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                    +L+K     A+       E ++ L ILL  FVP ++ +++
Sbjct: 680 --------LDLQKKQGGLAN-------ETLKALVILLAPFVPHISEELW 713


>gi|256827322|ref|YP_003151281.1| valyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583465|gb|ACU94599.1| valyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 888

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 38/183 (20%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHKGEKISKSL 307
           + +P  +    +DI+      W A ++ A       +P    +     +   G+ +SKS 
Sbjct: 483 RAYPTQVLATARDIMGL----WVARMVMAGEYCMKEIPFQDVIIYPTVMGSDGKPMSKSR 538

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP++++++ G D +R+ L+ ++   +D  +++D L+   N   AN I N  +R V 
Sbjct: 539 GNGVDPLKLMQDYGADGMRFGLLMQVTGAQDLRFNEDKLENSRN--FANKIRN-AARFVL 595

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           M ++ Y     TPGA     E+ L V   +                L+++  LV  VD+ 
Sbjct: 596 MNMEGY-----TPGA----PEAKLPVDRWI----------------LSRLAGLVERVDKA 630

Query: 428 FDA 430
           FDA
Sbjct: 631 FDA 633


>gi|220908492|ref|YP_002483803.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782385|sp|B8HMX3|SYI_CYAP4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219865103|gb|ACL45442.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 955

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 107/248 (43%), Gaps = 40/248 (16%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
           +PA++++ G D    H  ++ + LL++     +   K V +HGF+L  +G K+SKSLGNV
Sbjct: 556 YPAEMYLEGSDQ---HRGWFQSSLLTSVATHGIAPYKTVLTHGFVLDEQGRKMSKSLGNV 612

Query: 311 IDPIEVIE---------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           +DP  VIE           G D LR + V  +    D    K+ LK+   AD+   I N 
Sbjct: 613 VDPAIVIEGGKNQKEDPPYGADILRLW-VSSVDYSSDVPLGKNILKQM--ADIYRKIRN- 668

Query: 362 VSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHR--AL 414
            +R +   L D+D   P           + D  +L     V  E+ E   +    R    
Sbjct: 669 TARFLLGNLHDFD---PANNKVEYDRLPQLDRYMLHRIVEVFTEVNEAFTSYQFFRFFQT 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKL 469
            Q   +V   + Y D  K   L  + PD        TVL++ +E    LA  +   VP L
Sbjct: 726 VQNFCVVDLSNFYLDIAKD-RLYISAPDDFRRRSCQTVLWIALE---NLAKAIAPVVPHL 781

Query: 470 ANKIFDIL 477
           A  I+  L
Sbjct: 782 AEDIWQFL 789



 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-------AKAAQNAGV 67
           Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I        K+ Q A +
Sbjct: 61  YANGDLHIGHALNKILKDIINKYWMLQGRKVRYVPGWDCHGLPIELKVLQGMKSEQRAAL 120

Query: 68  T 68
           T
Sbjct: 121 T 121


>gi|195378831|ref|XP_002048185.1| GJ13824 [Drosophila virilis]
 gi|194155343|gb|EDW70527.1| GJ13824 [Drosophila virilis]
          Length = 946

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L+S    N    + +F HGF +  KG K+SKSLGNVI P
Sbjct: 585 ADLYLEGYD--QFTGWFQSSLLMSIAARNCAPYRALFVHGFTVDEKGHKMSKSLGNVISP 642

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G D LR+++ 
Sbjct: 643 KQITKKYGTDVLRWWVA 659



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   I+ D+  R   + G  V +  G D HG  I   A ++        D
Sbjct: 82  YANGQLHMGHAVNKILKDITLRQRVVHGQQVNYIPGWDCHGLPIELKASSSAAG-----D 136

Query: 75  QNSRNFRD 82
           QN+ + R 
Sbjct: 137 QNALDIRQ 144


>gi|164686335|ref|ZP_02210365.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
 gi|164601937|gb|EDQ95402.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
          Length = 1037

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 115/242 (47%), Gaps = 21/242 (8%)

Query: 248 PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           P  +K KF   +PAD    G D  R  F+++   +  +    P  K V  +  +L K G+
Sbjct: 535 PFENKEKFERLFPADYICEGIDQTRGWFYSLLAISTFVMGKAPY-KNVLVNDLVLDKNGK 593

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP E+ ++ G DALR++L+          +D+ GL++ + +     + N+
Sbjct: 594 KMSKSKGNTVDPFELFDKYGADALRWYLLYVSPPWTPIRFDEAGLRE-IQSKFLGTMKNV 652

Query: 362 VSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              +   +  + D + P           E D  ILS  + +++   EN++   ++R +  
Sbjct: 653 Y--NFFTLYANTDDIDPKDFFVEYKDRPELDRWILSKYNSLVKSTVENLEIFEVNRVIRN 710

Query: 417 VISLVS-EVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + + ++ ++  ++     ++ W  + T   +A  V   T E++  L  L+  F P ++ +
Sbjct: 711 IQAFLNDDLSNWYIRRSRRRFWATELTEDKKA--VYNTTYELLTGLCRLIAPFAPYMSEE 768

Query: 473 IF 474
           ++
Sbjct: 769 MY 770


>gi|170586498|ref|XP_001898016.1| Valyl-tRNA synthetase [Brugia malayi]
 gi|158594411|gb|EDP32995.1| Valyl-tRNA synthetase, putative [Brugia malayi]
          Length = 1359

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 105/275 (38%), Gaps = 61/275 (22%)

Query: 254  KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKS 306
            KF+P+ L   G DIL F    W A +      L+  LP  ++V+ H  I    G K+SKS
Sbjct: 902  KFFPSTLLETGHDILFF----WVARMVFMSQELTGKLPF-QEVYLHAMIRDAHGRKMSKS 956

Query: 307  LGNVIDPIEV-------------------------------------IEEVGVDALRYFL 329
            LGNVIDP+ V                                     I E G DALR+ L
Sbjct: 957  LGNVIDPLNVIYGASLTQLTKILESGNLDPKELKRAKEGQAHDYPNGIPECGTDALRFAL 1016

Query: 330  VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFT 384
            +   +  +D   + D L+ +      N I    SR   M L+  +   P      P   +
Sbjct: 1017 LNYTSQCRD--INLDVLRIQGYRFFCNKIWQ-ASRFTLMQLR--NNFAPAEKFVLPEESS 1071

Query: 385  ESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVSEVDRYFDAQKPWELKKTNPD 442
              D  ILS  S  ++     M +   +R    + +  L    D Y +  KP      NP+
Sbjct: 1072 TLDRWILSRLSYAVESSNSGMSSYQFNRVTTTLYNFWLYEFCDIYIEGCKPVLAGSGNPN 1131

Query: 443  RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A  V  V  E +     LL  F+P +  +++  L
Sbjct: 1132 GAEIVRKVLFECVETGLRLLSPFMPFITEELWQRL 1166



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 13/76 (17%)

Query: 2   KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K   K   +  I  PN     H+GHA    + D + R+HR+ G  VLF  G D       
Sbjct: 433 KPNPKGIFTVVIPPPNVTGTLHLGHALATSVEDAVCRWHRMKGKTVLFNPGCD------- 485

Query: 60  KAAQNAGVTTKVFVDQ 75
               +AG+ T+V V++
Sbjct: 486 ----HAGIATQVVVEK 497


>gi|158291334|ref|XP_312846.4| AGAP003156-PA [Anopheles gambiae str. PEST]
 gi|157017725|gb|EAA08464.4| AGAP003156-PA [Anopheles gambiae str. PEST]
          Length = 865

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 16/108 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ +W D+  ++LT  G          K   ADL++ G D  +F   +  + L S  A  
Sbjct: 548 ILDIWFDSGVSWLTVLG----------KERVADLYLEGVD--QFTGWFQSSLLTSVAARG 595

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P + +F HGF +   G K+SKSLGNVI P ++ ++ G DALR+++ 
Sbjct: 596 KAPYRAIFVHGFAVDEHGMKMSKSLGNVICPQQIAKQYGCDALRWWVC 643


>gi|119873138|ref|YP_931145.1| isoleucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674546|gb|ABL88802.1| Isoleucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 977

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHVIGKDILR--FHAIYWPAF 278
           Y++ VW+D+   ++         DG +     +K +P D    G D  R  F+++   A 
Sbjct: 524 YVIDVWLDSGVAWIAAV------DGERNRELWSKLFPYDFVTEGIDQTRGWFYSLLASAM 577

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +     P  K V   G IL K G+K+SKS GNVI   ++ E+ G D +R +++ + A  +
Sbjct: 578 VYIGRAPY-KTVLIQGLILDKYGQKMSKSRGNVIWAKDLFEKYGADPVRLYILLKAAPWE 636

Query: 338 DGFYDKDGLKKRV-NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDES 389
           D  +D D +K  + N ++   I       +S+     DG         E        D  
Sbjct: 637 DLAFDPDEVKMAISNLNILWNIVKFADMYMSL-----DGFSAEKYPLEEWIDKALDEDRW 691

Query: 390 ILSVCSRVLQEIRENMQNQLIHRA 413
           +LS  ++++++  + ++N   H+A
Sbjct: 692 LLSELNKLIEDFTQYIRNFEFHKA 715


>gi|57234202|ref|YP_181754.1| isoleucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|84029514|sp|Q3Z7P5|SYI_DEHE1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57224650|gb|AAW39707.1| isoleucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 1014

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 15/274 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           +M  W D+    +    Y   P+    +K   +PAD      D  R  F++++  + L+ 
Sbjct: 548 VMDCWYDSGAMPVAQYHYPFEPESRSIAKDGRFPADYICEAVDQTRGWFYSLHAISTLI- 606

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            N P  + V   G IL  +GEK+SKS  NVI P  V+++ G DA+R++       G    
Sbjct: 607 FNRPCYQNVICLGHILDERGEKMSKSRNNVIQPATVLDKYGADAVRWYFYTAAPPGNARR 666

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSR 396
           +  + L   V       + N+ S  V+    + D   P+     G   E D  ILS  ++
Sbjct: 667 F-SEKLVGEVTRQFLLMLWNVYSFFVT--YANIDSFTPSEKYLEGEVPELDRWILSELNQ 723

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVI 455
           ++ ++ + + N    +A  ++   V  +  ++  +      K+  D      Y  +   +
Sbjct: 724 LVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSENDADKLSAYQALYTCL 783

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             L+ LL  F P +A +++  L ++ +    +S+
Sbjct: 784 VTLSRLLAPFTPFVAEELYQNLVLSADPSALESV 817


>gi|223933932|ref|ZP_03625893.1| isoleucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|302023468|ref|ZP_07248679.1| isoleucyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330832334|ref|YP_004401159.1| isoleucyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223897409|gb|EEF63809.1| isoleucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329306557|gb|AEB80973.1| isoleucyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 929

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNAREN------LAYPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L  KG K+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAVLSQGFVLDGKGMKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-V 73
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K   +
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     RD A   +D   DDF R            T  + ++  +I ++  ++DKG IY
Sbjct: 118 VEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQIRVFGAMADKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|322384958|ref|ZP_08058614.1| leucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150255|gb|EFX43762.1| leucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 814

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 20/178 (11%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLG 308
           P DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK+SKS G
Sbjct: 530 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVTTKEPFHKLVNQGMILGENMEKMSKSRG 589

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P  +++E G D LR +         + F     + K  N +   G    ++R   +
Sbjct: 590 NVVNPDVIVDEYGADTLRLY---------EMFMGPLEVTKPWNTNGVEGAHRFLNRIWRL 640

Query: 369 ILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + D  G +    + TE +  +S   V  + ++++ E+M+    + A++Q++  V+E 
Sbjct: 641 FIND-SGELSGKISKTEKNGSDSFKRVWHKTVKKVTEDMEALRFNTAISQLMIFVNEA 697



 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R+ G +VL   G D  G    + A
Sbjct: 37  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMRGYNVLHPMGWDAFGLPAEQHA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   +    +N   FR     L  SY  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 97  LDTGEHPRDITVKNINTFRRQIKSLGFSYDWDREISTTDPNYYKWTQWIFIQLYKKGLAY 156


>gi|312891064|ref|ZP_07750588.1| Isoleucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296531|gb|EFQ73676.1| Isoleucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 1130

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V S+G +L K G K+SK LGN +DP E I + G DA R++++   A   +  ++ +GL
Sbjct: 665 KNVVSNGLVLDKNGNKMSKRLGNAVDPFETISKYGADAARWYMISNAAPWDNLKFNLEGL 724


>gi|294812614|ref|ZP_06771257.1| Valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294325213|gb|EFG06856.1| Valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 875

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 9/178 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--N 283
           ++  W  +     +T G+ +  PD    KF+  D+ + G DI+ F       F L A   
Sbjct: 455 VLDTWFSSGLWPFSTLGWPEQTPD--LEKFYATDVLLTGHDIIFFWVARMMMFGLYAMDG 512

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P    +   G +  + G+K+SKS  N +DP++ ++  G DA+R+ L R    G D    
Sbjct: 513 EPPFHTIALTGLVRDEHGKKMSKSNPNSVDPLDWMDAYGSDAVRFTLARGANPGADVPIG 572

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D ++   N   AN I N  +R   M     +G +P     + +D  ILS  +R + E
Sbjct: 573 EDWVQASRN--FANKIWN-ATRFALMNGATVEGELPPAEKMSAADRWILSRLNRTVAE 627


>gi|146300033|ref|YP_001194624.1| valyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146154451|gb|ABQ05305.1| valyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 877

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 30/261 (11%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP- 287
            W  +    ++  G + +P+    K++ P +  V G DIL F    W A ++ A      
Sbjct: 460 TWFSSWLWPMSVFGGIMDPESPDFKYYYPTNDLVTGPDILFF----WVARMIIAGYEYAG 515

Query: 288 KKVFSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +K F++ ++       K  K+SKSLGN  DP+++I++   D +R  L+   + G D  +D
Sbjct: 516 EKPFTNVYLTGLVRDKKRRKMSKSLGNSPDPLDLIDKFSADGVRVGLLLSASAGNDIMFD 575

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQE 400
           ++   +      +N I N        ++K ++    I  P +   + E   +   + L +
Sbjct: 576 EELCSQ--GKAFSNKIWNAFK-----LIKGWEVSETIAQPESSKVAIEWYEAKLQQTLVD 628

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVIR 456
           I +N +   I  +L  +  LV      +D    W L+   P     +  VT    +E++ 
Sbjct: 629 IEDNFEKYRISDSLMAIYKLV------WDDFCSWFLEMIKPAYQQPIDSVTFAKAIEMLE 682

Query: 457 QLAILLQAFVPKLANKIFDIL 477
               LL  F+P L  +I+ ++
Sbjct: 683 NNLKLLHPFMPFLTEEIWQLI 703


>gi|319892813|ref|YP_004149688.1| Leucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162509|gb|ADV06052.1| Leucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 810

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+L+R+ R+ G +VL   G D  G    + A
Sbjct: 37  QKKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMQGYNVLHPMGWDAFGLPAEQYA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N + F+     L  SY  D  + TT+  ++   + ++ ++  KG  Y
Sbjct: 97  LDTGNDPAEFTKRNIQTFKRQIQELGFSYDWDREVSTTDPEYYKWTQWIFIQLYKKGLAY 156

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLS 178
                  W         N++ V   ++   Y     P+ QW+       +++ Y D+LL 
Sbjct: 157 IDEIPVNWCEALGTVLSNEEVVDGVSERGGYPVVRRPMKQWV------LKITEYADRLLE 210

Query: 179 YYES--HPEFILPIER 192
             ++   PE I  ++R
Sbjct: 211 DLDTLDWPESIKDMQR 226



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 36/192 (18%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHK 299
           D  K K W P DL++ G +    H +Y   W   L    + +P     +K+F+ G IL +
Sbjct: 520 DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGI-VPTSEPFQKLFNQGMILGE 578

Query: 300 G-EKISKSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKKRVNA 352
           G EK+SKS GNV++P +++   G D LR +      L   IA  ++G    DG ++    
Sbjct: 579 GNEKMSKSKGNVVNPDDIVRSHGADTLRLYEMFMGPLEASIAWSENGL---DGSRR---- 631

Query: 353 DLANGIGNL-VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              + +  L V+    +  K  +G  PT          + +   + ++++ E+ ++   +
Sbjct: 632 -FLDRVWRLFVTEDSQLTDKVIEGDTPT----------LQTAYHQTVKKVTEDFESLSFN 680

Query: 412 RALAQVISLVSE 423
            A++Q++  ++E
Sbjct: 681 TAISQLMVFINE 692


>gi|289209715|ref|YP_003461781.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288945346|gb|ADC73045.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 948

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P DL + G D  R  F +    +  +    P  + V +HGF +  KGEK+SKS GNV+ P
Sbjct: 562 PVDLFLEGSDQHRGWFQSSLLTSVAMRGEAPY-RAVLTHGFTVDEKGEKMSKSRGNVVAP 620

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            EV+  +G D LR ++       E+A  KD         +R+       +GNL
Sbjct: 621 QEVVSTLGADILRLWVAATDFSGEMAISKDILDRTADAYRRIRNTTRFLLGNL 673



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           R +  ++    Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 55  RPRFVLADGPPYANGSIHVGHAVNKVLKDIIVKSRTLSGFDAPYVPGWDCHGLPIELKVE 114

Query: 63  QNAGVTTKVFVDQNSRNFR 81
           QN G   K   D ++  FR
Sbjct: 115 QNLG---KAGRDVDAATFR 130


>gi|224373503|ref|YP_002607875.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588740|gb|ACM92476.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 819

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKKGFNVLHPIGWDSFGMPAENAAIKN 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDKGDIY 120
               K +  +N    R     L +S   F +  E    D     W+     K+ + G + 
Sbjct: 93  KTHPKKWTYENIDYMRKELKNLGLS---FSKEREFATSDPDYTRWEQEFIIKMYENGLLE 149

Query: 121 KGCYS-GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      W         N+  +    DG  +    NP++  E  G++ +++ Y D+LL
Sbjct: 150 RRTQKVNWCETCHTVLANEQVI----DGCCWRCD-NPIEIKELPGWYIKITKYADELL 202



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  KK+ + G +L  G K+SKS
Sbjct: 533 FAPVDQYIGGIEHAILHLLYARFFTKALRDLGYLELDEPF-KKLLTQGMVLKDGSKMSKS 591

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV 330
            GNV+DP E++ + G D  R F++
Sbjct: 592 KGNVVDPDEIVAKYGADTARLFIL 615


>gi|218129773|ref|ZP_03458577.1| hypothetical protein BACEGG_01352 [Bacteroides eggerthii DSM 20697]
 gi|217987883|gb|EEC54208.1| hypothetical protein BACEGG_01352 [Bacteroides eggerthii DSM 20697]
          Length = 894

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 31/237 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 502 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 556

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+++I+  G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 557 GNSPDPLDLIDRYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFNNKIWNAFR---- 610

Query: 368 MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            ++K ++    +P P A   +     S  + V  E+ +      +  AL  V  L     
Sbjct: 611 -LIKGWEVSAEVPMPEAAGLAMRWFESKQNAVAAEVADLFGKYRLSEALMAVYKL----- 664

Query: 426 RYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++D    W L+   P         V   T+     L  LL  F+P +  +++  +F
Sbjct: 665 -FWDEFSSWYLEMIKPAYGQPINKKVYETTIGFFDNLLHLLHPFMPFITEELWQHIF 720


>gi|121634048|ref|YP_974293.1| valyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120865754|emb|CAM09483.1| valyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 945

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+  G+D  +  + R     K
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLID--GIDLEKLLVKRTTGLRK 585



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|329889452|ref|ZP_08267795.1| valyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844753|gb|EGF94317.1| valyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 1163

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 14/112 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +  +  + +F+P    V   DI+     +W A ++      
Sbjct: 480 VLDTWFSSALWPFSTMGWPEKTEDLE-RFYPTSDLVTAADII----FFWVARMMMMGIHF 534

Query: 281 -SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               +P  K+V  +G +   KG+K+SKS GNVIDP+ +I+E+G D LR+ + 
Sbjct: 535 MDGEVPF-KRVIINGLVRDEKGQKMSKSKGNVIDPLGIIDELGADPLRFTMA 585



 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     HIGHA    + D+LAR+HR+ G  VL+  GTD           +AG+
Sbjct: 41 SIVIPPPNVTGSLHIGHALNNTLQDILARYHRMKGKAVLWLPGTD-----------HAGI 89

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 90 ATQMVVERK 98


>gi|330815527|ref|YP_004359232.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367920|gb|AEA59276.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 864

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 2/144 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K +  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  QKPKFFCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     + ++ D    I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIAYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG 144
           K   +  +   D+    +++V  G
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG 174


>gi|288818154|ref|YP_003432502.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787554|dbj|BAI69301.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751755|gb|ADO45238.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 922

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           AD+++ G D  R  F +    +    +  P  + V +HGF +  +G K+SKSLGNVI P 
Sbjct: 552 ADMYLEGSDQHRGWFQSSLLESVASYSKAPY-RAVLTHGFTVDEQGRKMSKSLGNVISPQ 610

Query: 315 EVIEEVGVDALRYFLVRE 332
           E+I++ G D LR ++V E
Sbjct: 611 EIIKQYGADILRLWVVSE 628



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTTK 70
           Y N   HIGHA   I+ DV+ ++  L G  V +  G D HG    Q++ K  Q   +  +
Sbjct: 57  YANGNIHIGHALNKILKDVINKYMLLSGYRVHYIPGWDCHGLPIEQQVEKELQAKNIKKE 116

Query: 71  VFVDQNSRNF-RDMAD-VLDISYDDFIR 96
               Q  R   R+ A   ++I  ++F R
Sbjct: 117 DISKQEFRKLCREYAKRFVNIQREEFKR 144


>gi|225076336|ref|ZP_03719535.1| hypothetical protein NEIFLAOT_01380 [Neisseria flavescens
           NRL30031/H210]
 gi|224952321|gb|EEG33530.1| hypothetical protein NEIFLAOT_01380 [Neisseria flavescens
           NRL30031/H210]
          Length = 945

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    +  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETEELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 575



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGYNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|254392444|ref|ZP_05007625.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440938|ref|ZP_08215672.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197706112|gb|EDY51924.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 873

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 9/178 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--N 283
           ++  W  +     +T G+ +  PD    KF+  D+ + G DI+ F       F L A   
Sbjct: 453 VLDTWFSSGLWPFSTLGWPEQTPD--LEKFYATDVLLTGHDIIFFWVARMMMFGLYAMDG 510

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P    +   G +  + G+K+SKS  N +DP++ ++  G DA+R+ L R    G D    
Sbjct: 511 EPPFHTIALTGLVRDEHGKKMSKSNPNSVDPLDWMDAYGSDAVRFTLARGANPGADVPIG 570

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D ++   N   AN I N  +R   M     +G +P     + +D  ILS  +R + E
Sbjct: 571 EDWVQASRN--FANKIWN-ATRFALMNGATVEGELPPAEKMSAADRWILSRLNRTVAE 625


>gi|161723843|ref|NP_360590.2| isoleucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|84029564|sp|Q92H19|SYI_RICCN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1092

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 603 HGVILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 662

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 663 TLRLFIKPIWNAYHFFTMYANADSLKGKLNFSSKNV-------------------LDVYI 703

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWE-LKKTNPDRAST 446
           LS     +Q+I E++ N     A   V +    ++ ++      + W+  K T+   A  
Sbjct: 704 LSKLKIAVQKIEESLDNFDTQTAYHAVSAFFEVLNNWYIRRSRARFWKSAKDTDKQNAYN 763

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 764 TLYSCLDT---MAIAMSALVPMISEAIYKGLRHCEE 796


>gi|309801733|ref|ZP_07695853.1| valine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308221675|gb|EFO77967.1| valine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 929

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR---FHAIYWPAF 278
           Q IM  W  +       T + +  + ++A F   +P DL   G+DI+R   F ++   A 
Sbjct: 518 QDIMDTWATSSLTPQIVTRWEEPGEENRAIFNATFPMDLRPQGQDIIRTWLFSSVD-RAH 576

Query: 279 LLSANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           L +  LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       
Sbjct: 577 LENKCLPWANATLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARL 632

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPT----PGAFTES-D 387
           G D  YD+  +K  +   LA  + N    ++++  +D +   G   T    P   TE  D
Sbjct: 633 GLDATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAAATASWNPADVTEPLD 690

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRAL 414
            + ++  + V+ E  +N+ N    +AL
Sbjct: 691 RAAMAKMAHVVSEATKNLNNYEHSKAL 717



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     D++ARF R++G DV +  G D++G    +
Sbjct: 45  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDIIARFKRMNGFDVFYPMGWDDNGLPTER 104

Query: 61  AAQN---AGVTTKVFVDQN--------SRNFRDMADVLDISYDDFIRTTEK 100
             QN     V T +  D N             D  D + IS  +FI   EK
Sbjct: 105 RVQNYYGVRVDTSLKYDPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEK 155


>gi|296313398|ref|ZP_06863339.1| valine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840109|gb|EFH24047.1| valine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 945

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+  G+D  +  + R     K
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLID--GIDLEKLLVKRTTGLRK 585



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGYNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|227834291|ref|YP_002835998.1| Leucyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183021|ref|ZP_06042442.1| leucyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254782491|sp|C3PKU4|SYL_CORA7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|227455307|gb|ACP34060.1| Leucyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 949

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EK+ I     YP+ A  H+GH    I  D  ARF+R+ G +VL T G D  G    + A 
Sbjct: 53  EKMNIQDMFPYPSGAGLHVGHPLGYIATDTYARFNRMLGKNVLHTLGYDAFGLPAEQYAI 112

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  N R    +L + +D
Sbjct: 113 QTGTHPRTTTEANINNMRRQLGMLGLGHD 141


>gi|163796491|ref|ZP_02190451.1| Leucyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159178341|gb|EDP62885.1| Leucyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 867

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 41/89 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ +  G +VL   G D  G     AA 
Sbjct: 44  KPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKKARGFNVLHPMGWDAFGLPAENAAI 103

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             GV    +  +N    ++    + +SYD
Sbjct: 104 ERGVHPHGWTHENIDAMKEQLKGMGLSYD 132


>gi|145517849|ref|XP_001444802.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412235|emb|CAK77405.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1162

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 17/236 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PAD    G D  R  F+ +   A  L  + P  K +  +G +L+ KGEK+SKS  N  D
Sbjct: 557 FPADFIAEGLDQTRGWFYTLNVIATALRDDTPY-KNLIVNGIVLNDKGEKMSKSKKNYPD 615

Query: 313 P-IEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK---KRVNADLANG----IGNLVS 363
           P IE+I + G DA+R +L+   +   +   + KDG++   K V     N     I NL  
Sbjct: 616 PEIEIINQFGADAMRLYLINSGLVKAQSLNFSKDGVQEVIKNVFLPWYNAYRFLIQNL-Q 674

Query: 364 RSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  S+I K ++D    T G     D+ I+S    +++ +R  M+   ++  + ++IS + 
Sbjct: 675 RYESVIGKFEFDENAITKGD-NIMDKWIVSSSQTLVEFVRTEMEAYRLYTIVPRLISYLD 733

Query: 423 EVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  ++       +K    ++   V L V  +V+ ++ +L+  +VP +    +  L
Sbjct: 734 ILTNWYVRLNRSRIKGDQGNQEWVVSLNVLFDVLLKITLLMSPYVPFITESFYQNL 789


>gi|269795721|ref|YP_003315176.1| valyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097906|gb|ACZ22342.1| valyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 906

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 4/108 (3%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           DP  IM  W  +        G+L +PD   ++ +P DL   G+DI+R    +    + L 
Sbjct: 530 DPD-IMDTWATSSLTPQIAGGWLSDPD-LFSRVFPMDLRPQGQDIIRTWLFSTVVRSHLE 587

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             +LP      S   +    +K+SKS GNV+ P+ ++EE G DA+RY+
Sbjct: 588 HGSLPWSDAGISGWILDPDRKKMSKSKGNVVTPMGLLEEHGSDAVRYW 635



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER  +Y I T     +   H+GH +     DV+ARF R+ G  V +  G D++G    + 
Sbjct: 56  ERADVYSIDTPPPTVSGSLHVGHVFSYTHTDVVARFQRMRGKSVFYPMGWDDNGLPTERR 115

Query: 62  AQN 64
            QN
Sbjct: 116 VQN 118


>gi|254672701|emb|CBA06614.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 945

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + ++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLEKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|269837640|ref|YP_003319868.1| valyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786903|gb|ACZ39046.1| valyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 894

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 109/290 (37%), Gaps = 79/290 (27%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKL---------------LSYYESHPEFILPIER--R 193
            A+ N V  ++EEGY  R+  +   +               L ++        P  +  R
Sbjct: 323 EARRNVVARLQEEGYLVRVEEHAHSVGHCDRCDTVVEPIISLQWWLRMEPLAKPAIQVAR 382

Query: 194 NEVISFVKSGLK-----------DLSLSRKTFDWGIKIP--------------------- 221
           +E + F+    K           D  LSR+ + WG +IP                     
Sbjct: 383 DETVRFIPERFKGIYLHWMENVHDWCLSRQLW-WGHRIPVWYCDACGEVTVTAEESIDRC 441

Query: 222 ---------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
                     DP  ++  W  +     +T G+ D+ +  +  F+P  +   G DI+    
Sbjct: 442 EHCGSTDIHQDPD-VLDTWFSSGLWPFSTLGWPDDTEDLR-YFYPGTVMETGYDII---- 495

Query: 273 IYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
             W A ++   L    +V     + HG +    G+++SK+ GNV+DP E+    G DALR
Sbjct: 496 FLWVARMIFLGLEFMGEVPFTHVYFHGTVRDEAGQRMSKTKGNVLDPTEITARYGSDALR 555

Query: 327 YFLVREIACGKDGFYDKDGLKKRVN-ADLANGIGNLVSRSVSMILKDYDG 375
           + L+   A G D       LK  V   + A    N +  +   +L+  DG
Sbjct: 556 FALITAGAPGAD-------LKLSVQRVEAARNFANKIWNATRYVLRAIDG 598



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 18/120 (15%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAGVTTKV- 71
           H+GHA  + + D+L R+HR+ G   L+  G D  G        ++IAK   +     +  
Sbjct: 58  HMGHALFVTVEDILTRWHRMLGEPTLWLPGADHAGIAGQWVVEKEIAKEGLSRHDLGREK 117

Query: 72  -------FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  ++D+     R+   +L  S D   F  T +       R  +K + DKG IY+G
Sbjct: 118 FLERVWDWMDRYRGRIREQLRILGASCDWTRFRFTMDPGPSRAVRTAFKHLYDKGLIYRG 177


>gi|256820245|ref|YP_003141524.1| valyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581828|gb|ACU92963.1| valyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 878

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 27/234 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHKGE-KISKSLG 308
           ++P +  V G DIL F    W   ++ A            V+  G +  K   K+SKSLG
Sbjct: 486 YYPTNDLVTGPDILFF----WVTRMIVAGYEYKGERPFSNVYLTGLVRDKQRRKMSKSLG 541

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  D +++I + G D +R  L+   A G D  +D+   ++        G GN +  +  +
Sbjct: 542 NSPDALKLISDYGADGVRVGLLLSSAAGNDLLFDEALCQQ------GKGFGNKLWNAFQL 595

Query: 369 ILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +     D  +  P A   + +   +  + VL E+ ++ +   I  AL  +  L       
Sbjct: 596 VKGWQVDSSVAQPTAAQLALQWFEAKFNAVLTEVEDHFEKYRISDALMAIYKLA------ 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVI----RQLAILLQAFVPKLANKIFDIL 477
           +D    W L+   P+    +   T E +      L  LL  F+P L  +I+  L
Sbjct: 650 WDDFCAWLLEMVKPEYGKPMDKATYEGVVAAFENLLKLLHPFMPFLTEEIWQSL 703


>gi|241563452|ref|XP_002401710.1| valyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501902|gb|EEC11396.1| valyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 684

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 21/269 (7%)

Query: 227 IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y    A L 
Sbjct: 373 VMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTILKAHLH 432

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 433 QNTLPWENIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KLGADTA 491

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-------TESDESILSV 393
           Y +D +K      L N + N  ++ VS+      G                E D+ I++ 
Sbjct: 492 YSEDVMKN--GKRLVNKLWN-AAKFVSIHFDKLKGKDKKAKLLDVKEKITNEFDQWIINK 548

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQK--PWELKKTNPDRASTVLY 449
              +++     +QN     A+         V  D Y +  K   ++ +  NP    + + 
Sbjct: 549 LVELVKLATNELQNYEYANAMHLTEKFFWAVFCDNYLEISKTRSYDEENKNPQEQYSSIL 608

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF 478
               V++ L  L   F+P +  +++ IL+
Sbjct: 609 TLYHVMQTLLKLFAPFMPHITEELYQILY 637



 Score = 38.1 bits (87), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G
Sbjct: 33 VSKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMIGKNIFYPMGFDDNG 87


>gi|303311097|ref|XP_003065560.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105222|gb|EER23415.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039371|gb|EFW21305.1| leucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1131

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+ V GKD+++ H  +W  ++  A  P    P+ V ++G +L  GEK+SKS GN +
Sbjct: 713 WYPLDVRVSGKDLIQNHLTFW-LYVHIALFPEEYWPRSVRANGHLLLNGEKMSKSTGNFL 771

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
              + +++ G DA R       A   DG  D +  +   N+++
Sbjct: 772 TLRDAVDKYGADATRI----AFADAGDGIEDANFEESVANSNI 810


>gi|119194645|ref|XP_001247926.1| leucyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 1131

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+ V GKD+++ H  +W  ++  A  P    P+ V ++G +L  GEK+SKS GN +
Sbjct: 713 WYPLDVRVSGKDLIQNHLTFW-LYVHIALFPEEYWPRSVRANGHLLLNGEKMSKSTGNFL 771

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
              + +++ G DA R       A   DG  D +  +   N+++
Sbjct: 772 TLRDAVDKYGADATRI----AFADAGDGIEDANFEESVANSNI 810


>gi|57641396|ref|YP_183874.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|62296831|sp|Q8NKR7|SYL_PYRKO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|57159720|dbj|BAD85650.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 967

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF  G    G  I   A+ 
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMGWHITGAPIVGIAER 93



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D     KD++  H      F +  ++ +      PK +  +GF   +G+K+SKS G
Sbjct: 601 WYPLDWRCSAKDLIPNHL----TFFIFNHVAIFDKKHWPKGIAVNGFGTLEGQKMSKSKG 656

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 657 NVLNFIDAIEENGADVVRLYIM 678


>gi|22474523|dbj|BAC10608.1| leucyl-tRNA synthetase [Thermococcus kodakaraensis]
          Length = 967

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF  G    G  I   A+ 
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMGWHITGAPIVGIAER 93


>gi|195125926|ref|XP_002007425.1| GI12399 [Drosophila mojavensis]
 gi|193919034|gb|EDW17901.1| GI12399 [Drosophila mojavensis]
          Length = 991

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           R + IS  K G K++SLSR               ++  W  +     +  G+   P+ S 
Sbjct: 500 REKAIS--KLGTKEVSLSRDV------------DVLDTWFSSSLLPFSVAGW---PNESY 542

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKS 306
            + +P DL   G DIL F    W A ++   L L  K      +L+      +G K+SKS
Sbjct: 543 KEKYPLDLMQTGHDILFF----WVARMMMMGLKLTGKAPFQRILLNGIVCDAQGRKMSKS 598

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           LGN++ P +V++   +D+L+  L +    G
Sbjct: 599 LGNIVTPQQVVQGASLDSLKATLQQSCDAG 628


>gi|167042850|gb|ABZ07567.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine microorganism HF4000_ANIW137J11]
          Length = 1212

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK +++    Y N  PH+GH + ++ A+++AR+ R+ G +VL+       G  IA AAQ
Sbjct: 289 REKYFVNFPYPYVNGYPHLGHGFTLLRAEMMARYQRMRGRNVLWPFAFHCTGTPIAAAAQ 348

Query: 64  N 64
            
Sbjct: 349 R 349



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 27/226 (11%)

Query: 255  FWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++P DL V GKD+++ H   +++    + S +   P+    +G++L  GEK+SKS GN  
Sbjct: 837  WYPYDLRVSGKDLIQNHLSFSLFNHTAVFSRD-KWPRGFAVNGWVLVNGEKMSKSRGNFY 895

Query: 312  DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
               ++I+  G DA R  L        +G  D +       A  A+  G  + R +  + +
Sbjct: 896  TIRQLIDRYGADATRLTLCNS----GEGLDDPN-----WEASFADTAGRKLERWLRFVAE 946

Query: 372  DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
                    P     SD+   ++ S+   + R          A+ +   L  E+ R++   
Sbjct: 947  QAGSGRDEP---HPSDDWFAAMLSQAAHDARCACDRMRFRTAMRR---LFFELPRHYR-- 998

Query: 432  KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              W L++    R   +      V R LA +    VP LA + +++L
Sbjct: 999  --WYLRRGGEPRRDLLHDYLSAVTRGLAPI----VPHLAEEAWELL 1038


>gi|111115668|ref|YP_710286.1| isoleucyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145616|sp|Q0SM18|SYI_BORAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110890942|gb|ABH02110.1| isoleucyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 1042

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 4/194 (2%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  +G +L   G K+SKS  N  DP+EVI   G DALR +L+       D     D  
Sbjct: 579 KNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPVVKADDLKYSDNG 638

Query: 347 KKRVNADLANGIGNLVS--RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            + V  ++   I N  S   + ++I K               D+ I+S    + + +   
Sbjct: 639 VRDVLKNIIIPIWNAYSFFTTYAIIDKFQPPKNLNLVKNNNLDKWIISELESLKKILNNE 698

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQ 463
           +    + +++  ++  + +++ ++  +      K+  D+     Y T+   I+ L ILL 
Sbjct: 699 IDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLA 758

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 759 PFIPFITEEIYQNL 772


>gi|254805782|ref|YP_003084003.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669324|emb|CBA08353.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 945

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + ++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLEKL 575



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|254472183|ref|ZP_05085583.1| leucyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211958466|gb|EEA93666.1| leucyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 830

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 26/182 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG- 359
           EK+SKS  NV+DP ++I+  G D  R F++ +    +D  + +DG+           IG 
Sbjct: 587 EKMSKSKKNVVDPTDIIDTYGADTARLFVLSDSPPERDIIWTEDGV-----------IGA 635

Query: 360 ----NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                 V R +  + +  D     P  F++   ++  V  + L  I ++      +RA+A
Sbjct: 636 WRHVQRVWRIIGEVAEKTDANTARPAEFSDEATALRRVSHKTLAAITKDFDGLGFNRAVA 695

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++    + + +   A    +L K  PD A    +   E    +  L++   P L+ + + 
Sbjct: 696 RLYEFTNAISKALQA----DLSK--PDMA----FALREAAGFILQLMEPITPHLSEECWS 745

Query: 476 IL 477
           +L
Sbjct: 746 ML 747



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 12/177 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA    V  K +  
Sbjct: 4   YPSGRLHMGHVRNYSMGDVVARFKRARGFNVLHPMGWDAFGMPAENAAAEKKVHPKGWTY 63

Query: 75  QNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY-KGCYSGWYSL 130
            N    R     + +S+D   +F  T ++ ++   + L+    + G +Y K     W  +
Sbjct: 64  DNIAAMRGQLKTIGLSFDWSREFA-TCDESYYAQQQALFLDFLEAGLVYRKNAKVNWDPV 122

Query: 131 RDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
                 N+  +  KG        Q +  QW      FF++S + ++LL   ++  E+
Sbjct: 123 DMTVLANEQVIDGKGWRSGAVVEQKDLTQW------FFKISDHSEELLEAIDTLTEW 173


>gi|71082864|ref|YP_265583.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762713|ref|ZP_01264678.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|84029526|sp|Q4FPA9|SYI_PELUB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71061977|gb|AAZ20980.1| Isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718515|gb|EAS85165.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 905

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPA +++ G D  R  FH+    +       P  + + SHGF++  KG K+SKS+GNVI 
Sbjct: 556 WPASMYLEGSDQHRGWFHSSLLESCGTRGRAPY-ESILSHGFVVDGKGLKMSKSVGNVIA 614

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +++++ G D LR ++ 
Sbjct: 615 PEDILKKYGADILRIWVA 632



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K +EK  +     Y N   H+G A   I+ D++ +FH++DG D ++  G D HG  I
Sbjct: 44  KGKEKFILHDGPPYANGNIHMGTALNKILKDIIVKFHQMDGKDSVYVPGWDCHGLPI 100


>gi|332176353|gb|AEE12043.1| Isoleucyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 1137

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
            K +PAD    G D  R  F  ++  A +   ++   + V  +G +L K G K+SK LGN
Sbjct: 639 GKVFPADFIAEGVDQTRGWFFTLHAIATMTQGSIAF-RNVLVNGLVLDKDGNKMSKRLGN 697

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +DP  +I++ G D LR++++      ++  +D  G+++
Sbjct: 698 AVDPFGIIQQYGSDPLRWYMITNANPWENIRFDPKGVEE 736


>gi|313887291|ref|ZP_07820982.1| isoleucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923210|gb|EFR34028.1| isoleucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 1137

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
            K +PAD    G D  R  F  ++  A +   ++   + V  +G +L K G K+SK LGN
Sbjct: 639 GKVFPADFIAEGVDQTRGWFFTLHAIATMTQGSIAF-RNVLVNGLVLDKDGNKMSKRLGN 697

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +DP  +I++ G D LR++++      ++  +D  G+++
Sbjct: 698 AVDPFGIIQQYGSDPLRWYMITNANPWENIRFDPKGVEE 736


>gi|292654629|ref|YP_003534526.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372251|gb|ADE04478.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 958

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 18/225 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P D    G D++  H  ++      L      P+ +   G  L +GEK+S S G+V+ 
Sbjct: 581 WYPVDYRFSGNDLITNHLTFYQFHHGELFDEPQWPRGIVIMGMGLLEGEKMSSSKGHVVL 640

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E I E G D +R+FL+      +D  YD          DL   + + + R  +   + 
Sbjct: 641 PGEAIGEYGADTVRFFLLNSAEPWQD--YD-------WRDDLVGSVHDQLERFWNRAQE- 690

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
              +I  PG   + D  + +V   +L ++++ +++       A+  S        F+   
Sbjct: 691 ---IITDPGPDDQPD--LETVDRWLLSKLQDTVRDVTTAMDEAETRSASQAAFYNFEESL 745

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            W  ++T+ DR +   +    V+     LL  F+P + N++ + L
Sbjct: 746 RWYRRRTDLDRPA-AKWTLRTVLETRLRLLAPFIPFMTNELHEQL 789



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 27/56 (48%)

Query: 8  YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          +++    YP+   HIGHA    + DV AR+ R  G +VLF       G  I  A +
Sbjct: 35 FVTVPYPYPSGGMHIGHARTYTVPDVYARYRRQQGDNVLFPIAWHVTGTPIIGAVE 90


>gi|150005109|ref|YP_001299853.1| valyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166225520|sp|A6L3G7|SYV_BACV8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|149933533|gb|ABR40231.1| valyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKG 597

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             + D    I  P     + E   S+ ++   E+ +      +  AL  V  L      +
Sbjct: 598 WEVAD----IAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAVYKL------F 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
           +D    W L+   P     +   T E        L  LL  F+P +  +++  ++
Sbjct: 648 WDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEELWQHIY 702


>gi|91774447|ref|YP_544203.1| valyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91708434|gb|ABE48362.1| valyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 943

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 16/112 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKS 306
           +F P+ + V G DI+ F    W A +      ++  +P  K V+ HG I   +G+K+SKS
Sbjct: 499 QFLPSSVLVTGFDIIFF----WVARMVMMTKHITGKIPF-KDVYVHGLIRDAEGQKMSKS 553

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GNV+DPI++I+ +G++     LV++   G       + ++KR   +   GI
Sbjct: 554 KGNVLDPIDLIDGIGIEE----LVKKRTTGLMNPKQAEQIEKRTRKEFPEGI 601



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GH +   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 60  HMGHGFNQTIMDALTRYHRMRGANTLWQPGTD-----------HAGIATQIVVERQ 104


>gi|68304941|gb|AAY89952.1| predicted isoleucyl-tRNA synthetase [uncultured bacterium
           BAC13K9BAC]
          Length = 925

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 8/168 (4%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  + +  P  K V +HGF++ K G+K+SKS+GN+I P 
Sbjct: 550 ADLYLEGSDQHRGWFQSSLITSHAMYSKSPY-KNVLTHGFVVDKYGQKMSKSIGNIISPQ 608

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           ++I++ G D LR ++       +    D+  + KRV ++    I N  S+ +   + DYD
Sbjct: 609 KIIKDKGADILRLWVAMTDYSKEMTISDE--IIKRV-SESYRRIRN-TSKFLLSNISDYD 664

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                     E D+ I+     +  +I ++ +    H+ + +V++  +
Sbjct: 665 NQDINSEDMVELDKWIIHKAKVLNNQILKDYEEFKFHKIMQEVVNFCT 712



 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++K  +     Y N   HIGHA   I+ D + +   + G  V F  G D HG  I
Sbjct: 45  KNKKKYILHDGPPYANGDIHIGHAVNKILKDFIIKSKIMSGFHVPFIPGWDCHGLPI 101


>gi|330805567|ref|XP_003290752.1| hypothetical protein DICPUDRAFT_49396 [Dictyostelium purpureum]
 gi|325079102|gb|EGC32719.1| hypothetical protein DICPUDRAFT_49396 [Dictyostelium purpureum]
          Length = 1072

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 18/163 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + I  DP  ++  W  +     +  G+ D  +     F+P  L   G DIL F    W A
Sbjct: 584 VSIEQDPD-VLDTWFSSGLFPFSVMGWPDQTE-DMMNFYPTSLLETGSDILFF----WVA 637

Query: 278 FL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +      L+  LP    VF H  +    G K+SKSLGNVIDP +VI+ V +D     L+
Sbjct: 638 RMVMMGQQLTGKLPF-DTVFLHSMVRDAHGRKMSKSLGNVIDPNDVIKGVSLDG----LI 692

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++  G     + +     V  D  NGI    + ++   L  Y
Sbjct: 693 EKLYEGNLDPKEVEKASAGVKQDFPNGIAECGTDAMRFALCAY 735


>gi|241759644|ref|ZP_04757745.1| valine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320016|gb|EER56397.1| valine--tRNA ligase [Neisseria flavescens SK114]
          Length = 998

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 531 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 585

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+  G+D  +  + R     K
Sbjct: 586 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLID--GIDLEKLLVKRTTGLRK 640



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|83815822|ref|YP_444601.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757216|gb|ABC45329.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 1080

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 10/133 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           ++PD    ++ VW D+         Y  +N D  +A F PAD    G D  R  F++++ 
Sbjct: 525 RVPD----LIDVWFDSGAMPYAQWHYPFENEDDFEANF-PADFIAEGVDQTRGWFYSLHA 579

Query: 276 PAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            A ++   +   + V  +G +L + G K+SKS+GN ++P EVI++ G D +R+F++    
Sbjct: 580 IATVVFDEVAY-ENVVVNGLVLDEDGNKMSKSVGNTVEPFEVIDDYGADVVRWFMMSNAP 638

Query: 335 CGKDGFYDKDGLK 347
             +   + + GL+
Sbjct: 639 PWESIRFSERGLR 651



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 30/187 (16%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFVDQ 75
           N  P I H     I D+  R+  + G  V    G D HG  +  +  +  G+ T+  V++
Sbjct: 52  NGTPGIHHVLARAIKDIFCRYKTMQGYQVDRKAGWDTHGLPVEIEVEEELGLETRAEVEE 111

Query: 76  ------------NSRNFRDMADVLD------ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                       +   ++D+ D L       +  DD   T E  + +T   L K+I ++ 
Sbjct: 112 YGIEKYNAACRGSVLEYKDLWDNLTQRMGYWVDLDDPYVTFETDYIETVWWLLKQIEEED 171

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM------EEEGYFFRLSA 171
            +YKG    WYS       +  EV  G     Y    +P  ++      EE  YF   + 
Sbjct: 172 LLYKGHKIQWYSPGSHTVLSSHEVSLG-----YEETQDPSVYIRFPVAGEENTYFLAWTT 226

Query: 172 YQDKLLS 178
               L+S
Sbjct: 227 TPWTLIS 233


>gi|73669475|ref|YP_305490.1| valyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|90101530|sp|Q46B32|SYV_METBF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72396637|gb|AAZ70910.1| valyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 869

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 20/277 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L  TG+    D       PA +   G DI+R  A Y    +  L    
Sbjct: 448 VLDTWMDSSITALHVTGWESEHDLRL----PAQIRPQGHDIIRTWAFYTILRSLALEGKR 503

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +   +   G K+SKSLGNVI P EV  +   DA R +     + G D  +   
Sbjct: 504 PWDSIVINGMVLGPDGHKMSKSLGNVISPEEVTTKYSADAFRQWGAVGGSTGSDVMFR-- 561

Query: 345 GLKKRVNAD-LANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             K  V+A      + ++   S+S +      D       +    D  +LS  +R++   
Sbjct: 562 -WKDVVSASRFLQKMWSIYRFSMSHLKGFGQEDAEKFQKDSLHIIDRWLLSKLNRLVDTA 620

Query: 402 RENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + + +         +     EV  D Y +  K   L   +P+      YV     + L+
Sbjct: 621 TKELDDYQFDSTFKAIRGFAWEVLADNYLELVKG-RLYGDDPEGKRAAQYVLYRTTKTLS 679

Query: 460 ILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRL 493
           +LL  F+P  A +++  L  +DE+   + + ++D+ L
Sbjct: 680 LLLAPFIPFFAEELYSRL--SDESVHTQAWPAVDESL 714



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           R +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG     K  
Sbjct: 37  RPQYIIDTPPPYPTGNFHIGNALNWCYIDFVARYKRMRGYNVMFPQGWDCHGLPTEVKVE 96

Query: 63  QNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKR 101
           +  G+T     +Q  R  FR M   L     D +R T  R
Sbjct: 97  EIHGITK----NQVPRAEFRKMCRELTAGNIDKMRKTMLR 132


>gi|85704104|ref|ZP_01035207.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671424|gb|EAQ26282.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 889

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKIATGHNVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +G   K +   N  + R     L +S D   +F  T +  ++   + L+    + G +Y
Sbjct: 91  ASGGHPKDWTYSNIADMRAQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLEHGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  +      N+  +    DG+ + +    V+  E   +FFR+S + + LL
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAE-VERRELTQWFFRISDFAEDLL 202


>gi|308450410|ref|XP_003088289.1| hypothetical protein CRE_07173 [Caenorhabditis remanei]
 gi|308248160|gb|EFO92112.1| hypothetical protein CRE_07173 [Caenorhabditis remanei]
          Length = 510

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 19/169 (11%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K + +HGF +  KG K+SKSLGN I  
Sbjct: 131 PADLYLEGSDQHRGWFQSSLLTSIAIHKRAPY-KALLTHGFTVDEKGRKLSKSLGNFIPL 189

Query: 314 IEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            ++I+++G D LR ++       EIA   + F       +R+   L   + NL     S 
Sbjct: 190 EDIIKQLGADGLRLYVASSDYRYEIAASNEIFSRVSDSYRRIRNTLRFLLANLNGFKPST 249

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCS---RVLQEIRENMQNQLIHRAL 414
                D +I         D+ IL   +   + +Q+  E+M   ++  AL
Sbjct: 250 DALPVDQLIAL-------DQYILQRAADVQKTIQQAYEDMNFHVVTNAL 291


>gi|307566452|ref|ZP_07628886.1| valine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307344840|gb|EFN90243.1| valine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 898

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 29/246 (11%)

Query: 245 LDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP+  + + ++P    V G DI+ F    W A ++ A        P  K V+  G + 
Sbjct: 493 INNPNNDEISYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGKFPF-KHVYFTGIVR 547

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             KG K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D+   ++  N    N
Sbjct: 548 DKKGRKMSKSLGNSPDPLELIDKFGADGVRMGMMLSAPAGNDILFDEALCEQGRN--FNN 605

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N          +   G      A  ES +  +   +  L+ +  +MQ Q     ++ 
Sbjct: 606 KIWN--------AFRLVKGWQVDNLAQPESCKIAVRWFNAKLKAVNADMQQQFKSYRISD 657

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANK 472
            +  + ++  ++D    W L+   P+       +    T+     L  +L  F+P +  +
Sbjct: 658 ALMTIYKL--FWDEFSSWYLEMIKPEYGCPIDKSTYEATLSFFDTLLKMLHPFMPFITEE 715

Query: 473 IFDILF 478
           ++  L+
Sbjct: 716 LWHHLY 721


>gi|294778918|ref|ZP_06744334.1| valine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447227|gb|EFG15811.1| valine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKG 597

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             + D    I  P     + E   S+ ++   E+ +      +  AL  V  L      +
Sbjct: 598 WEVAD----IAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAVYKL------F 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
           +D    W L+   P     +   T E        L  LL  F+P +  +++  ++
Sbjct: 648 WDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEELWQHIY 702


>gi|253995905|ref|YP_003047969.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982584|gb|ACT47442.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 938

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 29/249 (11%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +  + P  K + +HGF++   G K+SKS GNV+ P
Sbjct: 569 PADLYLEGSDQHRGWFQSSLLTGCAIDGHAPY-KALLTHGFVVDGSGHKMSKSKGNVVAP 627

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V++  G D LR ++      G+    D+  + KRV A+    I N + R +   L D+
Sbjct: 628 QKVMDTYGADILRLWVASTDYSGELTISDE--ILKRV-AESYRRIRNTL-RFLLANLADF 683

Query: 374 DG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE------- 423
           D    ++P    + E D   L +  ++   I  +      H A+ + +S  SE       
Sbjct: 684 DATKDLLPV-SEWLEIDRYALHLTDKLQTGILADYDRYEFHLAVQKFVSFCSEDLGGFYL 742

Query: 424 ---VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               DR +   +    ++      ST+ ++T  ++R +A +L +F    A++I+  L + 
Sbjct: 743 DILKDRLYTTGETSHARRVA---QSTLHHITHTMMRLMAPIL-SFT---ADEIWQTLGLD 795

Query: 481 DENRCFQSL 489
            +   F+ L
Sbjct: 796 ADKTVFEEL 804


>gi|242374049|ref|ZP_04819623.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348239|gb|EES39841.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
          Length = 408

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 31  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 91  LDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ V    DG      H PV     + +  +++ Y D+LL  
Sbjct: 151 VDEVAVNWCPALGTVLSNEEVV----DGVSERGGH-PVYRKPMKQWVLKITEYADRLLED 205

Query: 180 YES--HPEFILPIER 192
            +    PE I  ++R
Sbjct: 206 LDELDWPESIKDMQR 220


>gi|165933533|ref|YP_001650322.1| isoleucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165908620|gb|ABY72916.1| isoleucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 1106

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 617 HGVILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 676

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 677 TLRLFIKPIWNAYHFFTMYANADSLKGKLNFSSKNV-------------------LDVYI 717

Query: 391 LSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRAST 446
           LS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   A  
Sbjct: 718 LSKLKIAVQKIEESLDNFDTQTAYHAVSEFFKVLNNWYIRRSRARFWKSEKDTDKQNAYN 777

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 778 TLYSCLDT---MAIAMSALVPIISEAIYKGLRHCEE 810


>gi|325285980|ref|YP_004261770.1| Isoleucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321434|gb|ADY28899.1| Isoleucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 1133

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 631 KAYPADFIAEGVDQTRGWFYTLHAISTMVFDSVAY----KNVVSNGLVLDKDGKKMSKRL 686

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GN +DP E + + G DA R++++       +  +D +G+
Sbjct: 687 GNAVDPFETMNQFGPDATRWYMISNANPWDNLKFDLEGI 725


>gi|300362219|ref|ZP_07058396.1| leucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354838|gb|EFJ70709.1| leucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 804

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKGEKISKSLGN 309
           P DL++ G +    H +Y   W   L    +   K    ++++ G IL   EK+SKS GN
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLYNQGLILKNHEKMSKSKGN 580

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +VI+E G D+LR + +          +D +G                + R   + 
Sbjct: 581 VVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLF 631

Query: 370 LKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++   +
Sbjct: 632 VNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFINAAQK 689



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 10/156 (6%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH       D+++R  R  G +VL   G D  G    + A   G   +    +N  NF
Sbjct: 47  HVGHPEGYTATDIISRMKRAQGYNVLHPMGWDAFGLPTEQYALKTGEDPEKVTKENIANF 106

Query: 81  RDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   + L  SY  D  + T++  ++   + +++++  KG  Y+      +S        +
Sbjct: 107 KKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLAYEAEVPVNWSPDLGTVVAN 166

Query: 139 DEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +E+  G    G Y   + N  QWM       +++AY
Sbjct: 167 EEIVDGKTERGGYPVYRRNMRQWM------LKMTAY 196


>gi|291455990|ref|ZP_06595380.1| valyl-tRNA synthetase [Bifidobacterium breve DSM 20213]
 gi|291382399|gb|EFE89917.1| valyl-tRNA synthetase [Bifidobacterium breve DSM 20213]
          Length = 911

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + S+A F   +P DL   G+DI+R    +    A L +
Sbjct: 519 IMDTWATSSVTPQIVTHWAEPDEASQALFKSTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 578

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 579 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 634

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 635 ATYDIGQMKIGRRLAIKLLNA 655



 Score = 44.3 bits (103), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 44  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 103

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEKRHHDTCRI 108
             QN  GV   V +  +  +F+           D  D + IS  +FI   EK   +  ++
Sbjct: 104 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAEDEKL 162

Query: 109 ---LWKKIS 114
              LW+K+ 
Sbjct: 163 FEALWRKLG 171


>gi|118602372|ref|YP_903587.1| isoleucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166229765|sp|A1AW09|SYI_RUTMC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118567311|gb|ABL02116.1| Isoleucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 922

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++ T           K     ADL++ G D  R  F      +  ++   
Sbjct: 522 ILDVWFDSGVSHFTVL------KARKELSNVADLYLEGADQHRGWFQLSLISSVAINGKA 575

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF++ K G+K+SKSLGNV+ P +++  +G D LR ++ 
Sbjct: 576 PY-KNVLTHGFVVDKNGKKMSKSLGNVMSPQKIVNNLGADVLRLWIA 621


>gi|17510661|ref|NP_493377.1| Valyl tRNA Synthetase family member (vrs-2) [Caenorhabditis
           elegans]
 gi|75025236|sp|Q9U1Q4|SYV_CAEEL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|6425518|emb|CAB60428.1| C. elegans protein Y87G2A.5, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1050

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 12/103 (11%)

Query: 248 PDGSKAK--FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           PD +K    F+P  +   G DIL F    + + A  L+  LP  K++  H  I    G K
Sbjct: 584 PDATKDMDLFFPGAVLETGHDILFFWVARMVFMAQELTGKLPF-KEILLHAMIRDAHGRK 642

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
           +SKSLGNVIDP++VI  + ++ L+  L+      +EIA  K+G
Sbjct: 643 MSKSLGNVIDPLDVIRGISLNDLQAQLLGGNLDEKEIAVAKEG 685



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 25/112 (22%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA    + D + RF+R+ G   LF  G D           +AG+
Sbjct: 121 TVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFNPGCD-----------HAGI 169

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            T+V V++  +  R +    D+  D F +            +W   ++KGD+
Sbjct: 170 ATQVVVEKRLKRERGLTR-HDLGRDRFNQE-----------VWHWKNEKGDV 209


>gi|15620064|gb|AAL03491.1| isoleucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 1106

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 617 HGVILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 676

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 677 TLRLFIKPIWNAYHFFTMYANADSLKGKLNFSSKNV-------------------LDVYI 717

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWE-LKKTNPDRAST 446
           LS     +Q+I E++ N     A   V +    ++ ++      + W+  K T+   A  
Sbjct: 718 LSKLKIAVQKIEESLDNFDTQTAYHAVSAFFEVLNNWYIRRSRARFWKSAKDTDKQNAYN 777

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 778 TLYSCLDT---MAIAMSALVPMISEAIYKGLRHCEE 810


>gi|269127126|ref|YP_003300496.1| isoleucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268312084|gb|ACY98458.1| isoleucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 1059

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 26/209 (12%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-------KDG 339
           + V   G IL + G K+SK LGNV++PI +++  G DALR+F+    AC        + G
Sbjct: 582 ENVLCVGLILAEDGRKMSKHLGNVLEPIPLMDRHGADALRWFM----ACNGLPWTARRVG 637

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-------DYDGMIPTPGAFTESDESILS 392
               + + ++V     N    LV  S +           D     P P      D   LS
Sbjct: 638 HAALEEIVRKVLLTYWNTASFLVLYSNAAAASGGRPWTPDRMSEAPAPADRPLLDRWALS 697

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS-TVL 448
              R + E+   ++N    RA  ++   + ++  ++     ++ WE   T    A+   L
Sbjct: 698 ELHRTVAEVDAALENFDTTRAGRRLAEFIDDLSNWYVRRSRRRFWEGPDTPEGAAAFATL 757

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y   E +  L  LL   VP + + I+D++
Sbjct: 758 Y---ECLETLTRLLAPLVPFITDYIWDVI 783


>gi|262401619|ref|ZP_06078185.1| isoleucyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352036|gb|EEZ01166.1| isoleucyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 949

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       +   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|261212209|ref|ZP_05926495.1| isoleucyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838817|gb|EEX65468.1| isoleucyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 949

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       +   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|212550990|ref|YP_002309307.1| leucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229559882|sp|B6YRS4|SYL_AZOPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212549228|dbj|BAG83896.1| leucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 918

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  RNKPKYYVLDMFPYPSGVGLHVGHPLGYIASDIYARYKRLKGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHH 103
            A   G    +   +N   +R   D +   +  D  IRT + +++
Sbjct: 88  YAIQTGQHPSITTKENINRYRKQLDKIGFCFDWDREIRTCDPKYY 132


>gi|254432512|ref|ZP_05046215.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626965|gb|EDY39524.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 20/114 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L      +   +PADL++ G D  R  F +    +  ++   P
Sbjct: 558 MDVWFDSGSSW---AGVLQE----RGLRYPADLYLEGSDQHRGWFQSSLLTSVAVNGEAP 610

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             ++V +HGF L  KG K+SKSLGNV+DP  ++E           G D LR ++
Sbjct: 611 Y-RRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGRNEKQEPAYGADVLRLWV 663


>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 930

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       D  D       PADL++ G D  R  FH+    A       
Sbjct: 531 ILDVWFDSGVSHAAVVENRDYLDS------PADLYLEGSDQHRGWFHSSLLAAVGTRGVA 584

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF++   G K+SKS GNV+ P  VI + G + LR ++  +
Sbjct: 585 PY-KAVLTHGFVVDGNGRKMSKSQGNVVAPDAVINKFGAEVLRLWVAAQ 632



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           R +  +     Y N   HIGHA   I+ D++ +  R+ G DV +  G D HG  I     
Sbjct: 47  RPRFTLHDGPPYANGHTHIGHALNKILKDIVLKSRRMQGFDVPYVPGWDCHGLPIELMVD 106

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            K  +     TK  + +  RN+    + +D    +F R
Sbjct: 107 KKLGKKKRDMTKAEIRRECRNY--ATEWVDTQASEFKR 142


>gi|299143925|ref|ZP_07037005.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518410|gb|EFI42149.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 1031

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 14/234 (5%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PA+    G D  R  F+++   +  ++   P  K V  +  IL K G+K+SKS GN 
Sbjct: 539 ELFPANFICEGIDQTRGWFYSLLAISTYMTGVTPY-KNVLVNDLILDKFGKKMSKSKGNT 597

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           + P E+ ++ G D +R++L+          +D+DGL++   +     + N+   +   + 
Sbjct: 598 VQPFELFDKYGADTVRWYLMYVSPPWAPTKFDEDGLRE-AESKFFRSLRNIY--NFFSLY 654

Query: 371 KDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-V 424
            + D + P     +     E D+ +LS  + +L  ++ +M+   + R +  +   V E  
Sbjct: 655 ANTDEIDPREFKVSYENRDEIDKWLLSKYNNLLLNVKADMEVFELTRVVRNIQDFVIEDF 714

Query: 425 DRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++  +      KT  D     +Y  T EV+  +  ++  FVP +A ++F  L
Sbjct: 715 SNWYIRRNRRRFWKTEIDDDKKAVYNTTYEVMLGITKVIAPFVPFIAEELFKSL 768


>gi|262163906|ref|ZP_06031645.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027434|gb|EEY46100.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 949

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       +   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|237711163|ref|ZP_04541644.1| valyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229455007|gb|EEO60728.1| valyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKG 597

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             + D    I  P     + E   S+ ++   E+ +      +  AL  V  L      +
Sbjct: 598 WEVAD----IAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAVYKL------F 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
           +D    W L+   P     +   T E        L  LL  F+P +  +++  ++
Sbjct: 648 WDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEELWQHIY 702


>gi|171057170|ref|YP_001789519.1| leucyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689086|sp|B1XXY5|SYL_LEPCP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|170774615|gb|ACB32754.1| leucyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 887

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 7/184 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D+L R  R+ G++VL   G D  G     AA 
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGMNVLMPMGWDAFGLPAENAAL 97

Query: 64  NAGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +  +N    +   +A  L I +   + T +  ++   + L+ K+ + G   +
Sbjct: 98  KNSVPPEKWTRENIATMKGQMLAMGLAIDWSREVATCDPTYYKWNQWLFLKMLEAGIAER 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E  GY+  +  Y D+LL    
Sbjct: 158 RTQVVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYLNIVKYADELLGAV- 212

Query: 182 SHPE 185
           ++PE
Sbjct: 213 ANPE 216


>gi|183219687|ref|YP_001837683.1| leucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909823|ref|YP_001961378.1| leucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687774|sp|B0SAB8|SYL_LEPBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687855|sp|B0STJ3|SYL_LEPBP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167774499|gb|ABZ92800.1| Leucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778109|gb|ABZ96407.1| Leucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 867

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R  R++G +VL   G D  G    + A
Sbjct: 30  KPKYYCLDMFPYPSGAGLHVGHPEGYTATDIISRLKRMEGYEVLHPMGWDAFGLPAERYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
              G+  +     N   FR     L +SY D+ R     H D  R
Sbjct: 90  MTTGIHPRTTTKNNIDTFRRQIKSLGLSY-DWEREISTTHPDYYR 133



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 58/251 (23%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHKG 300
           D    K W P +++V G +    H +Y   W   L      + P P KK+   G IL + 
Sbjct: 576 DPELEKMWMPVEVYVGGAEHAVLHLLYSRFWHKILFDLGHVSTPEPFKKLVHQGLILGED 635

Query: 301 E-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           + K+SKS GNV++P +V+ E G D LR F         + F     + K  + +  +G+ 
Sbjct: 636 KGKMSKSRGNVVNPDDVVSEFGADTLRLF---------EMFMGPFEMSKPWSKNGVDGVF 686

Query: 360 NLVSR---------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             ++R         + S  ++D            E +E+      R ++++++++ +   
Sbjct: 687 RFLNRVWRLFHSGENESFFVED-----------IEPNEAEQKTLHRTIKKVKDDIDSFSF 735

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A++Q++  ++E               +NP +   VL           + L  F P LA
Sbjct: 736 NTAVSQMMIFINEF-------------TSNPRKPKQVL-------EPFVLALSPFAPHLA 775

Query: 471 NKIFDILFVAD 481
            +++  L   D
Sbjct: 776 EELWAKLGHTD 786


>gi|157828807|ref|YP_001495049.1| isoleucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157801288|gb|ABV76541.1| isoleucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 1103

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 48/216 (22%)

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 614 HGVILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 673

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 674 TLRLFIKPIWNAYHFFTMYANADSLKGKLNFSSKNV-------------------LDVYI 714

Query: 391 LSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRAST 446
           LS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   A  
Sbjct: 715 LSKLKIAVQKIEESLDNFDTQTAYHAVSEFFKVLNNWYIRRSRARFWKSEKDTDKQNAYN 774

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 775 TLYSCLDT---MAIAMSALVPIISEAIYKGLRHCEE 807


>gi|307543906|ref|YP_003896385.1| isoleucyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307215930|emb|CBV41200.1| isoleucyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 1006

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 19/164 (11%)

Query: 230 VWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T +   +  +  + +  G +A     DL++ G D  R  FH+       +  + 
Sbjct: 599 VWFDSGTTHRHVMRGSHPMGHEQGPRA-----DLYLEGSDQHRGWFHSSLLTGSAIDGHP 653

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  +++ +HGF +  KG K SKSLGNV+ P +V++++G D LR ++      G+    D+
Sbjct: 654 PY-RQLLTHGFTVDEKGRKQSKSLGNVVAPQDVMDKLGADILRLWVASTDYSGEMAVSDQ 712

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
             + KR  AD+   I N    +   +L + +G  P   A    D
Sbjct: 713 --ILKR-TADVYRRIRN----TSRFLLANLNGFDPERDALAFDD 749



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           RE   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 110 RESFVLHDGPPYANGSIHIGHALNKILKDIIVKSKNLAGFDAPYVPGWDCHGLPI 164


>gi|108885106|ref|NP_073015.2| isoleucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|84626124|gb|AAC71570.2| isoleucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078632|gb|ABY79250.1| isoleucyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 895

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  F++      + +  +P  K + SHGF L   G K+SKSLGN++DP+
Sbjct: 544 ADLYIEGSDQYRGWFNSSSNCGIIQNDLIPF-KSLVSHGFTLDENGNKMSKSLGNIVDPL 602

Query: 315 EVIEEVGVDALRYFL 329
           ++ ++ G D LR ++
Sbjct: 603 KICDQYGADILRLWV 617



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           Y N   H+GHA   I+ D + R    +G DV+F  G D HG  I  A 
Sbjct: 58  YANGSIHVGHALNKILKDFILRSWLYEGYDVVFIPGWDCHGLPIEHAV 105


>gi|319956024|ref|YP_004167287.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418428|gb|ADV45538.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 812

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 18/180 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR+ R  G++VL   G D  G     AA   
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYAIGDALARYWRKQGVNVLHPIGWDAFGMPAENAAIKH 91

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK--------KISDKG 117
               K +   N    R     L +S+      +++R   TC  L+         ++ + G
Sbjct: 92  KRHPKEWTYDNIAYMRKELGALGLSF------SKEREFATCDPLYTRWEQEFIIRMFEGG 145

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +Y+   +  +         +++V +G   +      NPV   E  GY+  +  Y  +LL
Sbjct: 146 LLYRESTTVNWCETCHTVLANEQVEEGCCWRC----DNPVVQREMPGYYIDIVRYAQELL 201



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 28/192 (14%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++ + G +L  G K+SKS GN +DP  ++E  G D  R F++      K+  +   G++ 
Sbjct: 566 RLLTQGMVLKDGAKMSKSKGNTVDPDAIVERYGADTARLFILFAAPPQKELEWKDSGVEG 625

Query: 349 --RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             R    L +    +  RS+  I  D+D + P      E+ E+     ++V + +R++  
Sbjct: 626 AYRFLKKLYSRKEKVSHRSLPEI--DHDALAP------EAKEAR----AKVYEALRKSGD 673

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
                 A   +I+   E     D       K+++P   S  +Y+       L  LL+  V
Sbjct: 674 VYEKTFAFNTLIAATMEALNALD-------KQSDPAVWSEGMYI-------LLHLLEPIV 719

Query: 467 PKLANKIFDILF 478
           P +A+++ + LF
Sbjct: 720 PHIASELSEELF 731


>gi|297182280|gb|ADI18449.1| valyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF4000_13G19]
          Length = 928

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 11/105 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  +  K  F P D+ V G DI+     +W A ++   L  
Sbjct: 445 VLDTWFSSALWTFSTLGWPEQTEELKT-FHPTDVLVTGFDII----FFWVARMIMMTLKF 499

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 K+V+ HG +   +G+K+SKS GNV+DP+++I+ + +D L
Sbjct: 500 TGQVPFKQVYVHGLVRDAEGQKMSKSKGNVLDPLDLIDGIDLDTL 544



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA++  I D L R+ R+ G + L+  GTD           +AG+ T++ V++
Sbjct: 47 HMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTD-----------HAGIATQMVVER 90


>gi|268637685|ref|XP_636501.2| valyl tRNA synthetase [Dictyostelium discoideum AX4]
 gi|284018126|sp|Q54I78|SYVM_DICDI RecName: Full=Probable valyl-tRNA synthetase, mitochondrial;
           AltName: Full=Valine--tRNA ligase; Short=ValRS; Flags:
           Precursor
 gi|256012864|gb|EAL62993.2| valyl tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1051

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFI 296
           T T   DN D   ++F P D+   G DIL F     +   + L +  +P  K +  H  I
Sbjct: 542 TATKNSDN-DNDFSRFLPLDVMETGSDILFFWVARMVMMCSTLNNGEVPF-KTILLHPMI 599

Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGNVIDP+ VI  + +  L+  L +     ++      GL+K    +  
Sbjct: 600 RDSQGRKMSKSLGNVIDPLHVINGISLQDLKENLSKSNLSQQEKVTATKGLEK----EFP 655

Query: 356 NGIGNLVSRSVSMILKDY 373
            GI    + S+   L  Y
Sbjct: 656 QGIPQCGTDSLRFSLAQY 673


>gi|311740267|ref|ZP_07714098.1| leucine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304650|gb|EFQ80722.1| leucine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 998

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EKL +     YP+ A  H+GH    I  D  AR++R+ G +VL T G D  G    + A
Sbjct: 102 KEKLNVQDMFPYPSGAGLHVGHPLGYIATDTYARYNRMLGKNVLHTLGYDAFGLPAEQYA 161

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +   + N  N R    +L + +D
Sbjct: 162 IQTGTHPRTTTEANIENMRRQLGMLGLGHD 191


>gi|219685566|ref|ZP_03540382.1| valine--tRNA ligase [Borrelia garinii Far04]
 gi|219672844|gb|EED29867.1| valine--tRNA ligase [Borrelia garinii Far04]
          Length = 549

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 18/228 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P +  +   DI+ F    W A ++ A L    ++ F   +I       +G K+SKSLG
Sbjct: 149 YYPTNTLITAYDIIFF----WVARMVMAGLEFTGQIPFRDVYITPLLRDKQGRKMSKSLG 204

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+++I E G D+LR+ L      G+D   + D     + A  AN + N  S+ + +
Sbjct: 205 NGIDPLDIIHEYGSDSLRFTLSFLSVQGQD--LNIDAKDFMLGAKFANKVFN-ASKFILL 261

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L++ +  +     F + D+ +L+  +  +  +  +  N   + A   V         D 
Sbjct: 262 NLENRE--VFNDLKFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDW 319

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+
Sbjct: 320 YIEISKI-DLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIY 366


>gi|154494136|ref|ZP_02033456.1| hypothetical protein PARMER_03481 [Parabacteroides merdae ATCC
           43184]
 gi|154085998|gb|EDN85043.1| hypothetical protein PARMER_03481 [Parabacteroides merdae ATCC
           43184]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 32/265 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN-- 283
           ++  W  +    ++    +++PD  +  ++ P    V G DI+ F    W A ++ A   
Sbjct: 456 VLDTWFSSWLWPISLFNGINDPDNQEINYYYPTSDLVTGPDIIFF----WVARMIMAGYE 511

Query: 284 ----LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +P  K V+  G +  K G K+SKSLGN  DP+++IE+ G D +R  L+     G D
Sbjct: 512 YRGKMPF-KNVYFTGIVRDKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMMAAPAGND 570

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
             +D D L ++   +  N I N        ++K +  D  I  P A   + +       +
Sbjct: 571 IPFD-DALCEQ-GRNFNNKIWNAFR-----LIKGWTVDSTIEQPEAAATAVKWFKMQLDK 623

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTV 452
            + E+ +      +  A+  V  L      ++D    W L+   P     V       T+
Sbjct: 624 TIAEMDDLFGKYRLSEAMMAVYKL------FWDEFSSWYLEMVKPGYQQPVDKSTYLSTL 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
                L  LL  F+P +  +++  L
Sbjct: 678 GFFDALLRLLHPFMPFITEELWQAL 702


>gi|160903062|ref|YP_001568643.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189082329|sp|A9BI29|SYI_PETMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160360706|gb|ABX32320.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 919

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 11/108 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           I+ VWID+ +++       +     + K +P DL++ G D  R    +  +  LS     
Sbjct: 521 ILDVWIDSGSSFEAVANSRE-----ELKKFPVDLYLEGSDQHR--GWFQSSIFLSVAKHG 573

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +   + V +HGFI   +G+K+SKSLGNV++P ++I + G D LR ++ 
Sbjct: 574 IAPYESVLTHGFIKDEEGKKMSKSLGNVVNPKDIINKYGADILRLWVA 621



 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+G A   ++ D++ ++  L G D  +  G D HG  I        VTTK+   
Sbjct: 58  YANGDIHMGTALNKVLKDIVLKYKTLRGYDAPYVPGWDTHGLPIEH-----NVTTKLGEK 112

Query: 75  QNSRN---FRDMADVLDISYDDFIRTTEKR 101
            N+ +    R + +   + Y D  R + KR
Sbjct: 113 ANALSKLEIRKLCEDYAMKYVDIQRESFKR 142


>gi|111225554|ref|YP_716348.1| leucyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123142585|sp|Q0RCJ1|SYL_FRAAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|111153086|emb|CAJ64833.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Frankia alni ACN14a]
          Length = 1069

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE  YI     YP+    H+GH    I  DV AR+ R+ G  VL   G D  G    + A
Sbjct: 97  REPFYIMDMFPYPSGTGLHVGHPLGYIGTDVFARYLRMSGRHVLHPFGYDAFGLPAEQYA 156

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISD 115
            N G   +   D N  N R     L + +D    I TT+  ++   + ++++I D
Sbjct: 157 INTGQHPRTTTDANIANMRRQLSRLGLGHDTRREIATTDVGYYRWTQWIFEQIFD 211


>gi|85110062|ref|XP_963218.1| hypothetical protein NCU09463 [Neurospora crassa OR74A]
 gi|135140|sp|P10857|SYLC_NEUCR RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|168832|gb|AAA33593.1| leucyl-tRNA synthetase [Neurospora crassa]
 gi|28924888|gb|EAA33982.1| hypothetical protein NCU09463 [Neurospora crassa OR74A]
 gi|38524246|emb|CAE75711.1| leucine--tRNA ligase, cytosolic [Neurospora crassa]
          Length = 1123

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           F+P D+ V GKD++  H  +W    L  ++ L      PK V ++G +   GEK+SKS G
Sbjct: 708 FYPLDIRVSGKDLIPNHLTFW----LYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTG 763

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           N +   +V+++ G DA R  L    A   DG  D +
Sbjct: 764 NFMTLDDVVKKYGADAARVAL----ADAGDGISDSN 795


>gi|329934614|ref|ZP_08284655.1| leucyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329305436|gb|EGG49292.1| leucyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 941

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R K +I     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    
Sbjct: 34  LAARPKKFIMDMFPYPSGAGLHVGHPLGYIATDVYARFQRMTGHNVLHTLGFDAFGLPAE 93

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   +V  + N  N       L + +D
Sbjct: 94  QYAVQTGTHPRVSTEANIENMTSQLRRLGLGHD 126


>gi|226939543|ref|YP_002794616.1| Syi [Laribacter hongkongensis HLHK9]
 gi|259511507|sp|C1DCX2|SYI_LARHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226714469|gb|ACO73607.1| Syi [Laribacter hongkongensis HLHK9]
          Length = 957

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+ T +           G+ A+   +PADL++ G D  R  FH+       L    P
Sbjct: 565 VWFDSGTTHFHVL------RGTHAEQLAYPADLYLEGSDQHRGWFHSSLLTGCALDGRAP 618

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              ++ +HGF++  +G K+SKS+GNVI P ++ + +G D LR ++ 
Sbjct: 619 Y-NQLLTHGFVVDGQGRKMSKSVGNVIAPQKINDSLGADILRLWVA 663



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 24/55 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I
Sbjct: 47  RPKFILHDGPPYANGDIHIGHAVNKILKDIIVRSKTQAGFDAPYVPGWDCHGLPI 101


>gi|216263501|ref|ZP_03435496.1| isoleucyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980345|gb|EEC21166.1| isoleucyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 1042

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 4/194 (2%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V  +G +L   G K+SKS  N  DP+EVI   G DALR +L+       D     D  
Sbjct: 579 KNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPVVKADDLKYSDNG 638

Query: 347 KKRVNADLANGIGNLVS--RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            + V  ++   I N  S   + ++I K               D+ I+S    + + +   
Sbjct: 639 VRDVLKNIIIPIWNAYSFFTTYAIIDKFQPPKNLNLVKNNNLDKWIISELESLKKILNNE 698

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQ 463
           +    + +++  ++  + +++ ++  +      K+  D+     Y T+   I+ L ILL 
Sbjct: 699 IDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLA 758

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 759 PFIPFITEEIYQNL 772


>gi|19074192|ref|NP_584798.1| VALYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621250|sp|Q8SS27|SYVC_ENCCU RecName: Full=Probable valyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Valine--tRNA ligase; Short=ValRS
 gi|19068834|emb|CAD25302.1| VALYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 921

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 38/242 (15%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFF--RLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +GA+ Q+Y    N   W      ++  R+ AY+     +Y    +    ++ R+E +   
Sbjct: 455 EGAEKQWYKWLGNIRDWCLSRQLWWGHRVPAYKAPSGKWYVGRTKEDAFLKMRSECMG-- 512

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                D  LS    D         + ++  W  +      T G+ +  +    K++P  L
Sbjct: 513 ----SDCDLSELEQD---------EDVLDTWFSSGLWPFATLGWPEETE-DFLKYYPNTL 558

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPI 314
              G DIL F    W A ++   L L  KV     +LH       G K+SKSLGNVIDPI
Sbjct: 559 LETGSDILFF----WVARMVMLGLELTGKVPFSQVLLHGIVRDAHGRKMSKSLGNVIDPI 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR---VNADLANGIGNLVSRSVSMILK 371
            VI+   ++ L       I+  + G  D+  +K+    +  D  NGI    + ++   L 
Sbjct: 615 FVIDGCSLEKL-------ISTMRSGNLDEREVKRAEAVLRQDFPNGISRCGADALRFALL 667

Query: 372 DY 373
            Y
Sbjct: 668 SY 669



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS 77
           HIGHA  + I D + R+ R+ G +VL+  GTD  G               + VD+  
Sbjct: 91  HIGHAMMVSIQDAVCRYKRMCGYEVLYIPGTDHAGIATQNVVSKQLAREGIVVDREG 147


>gi|1351159|sp|P47587|SYI_MYCGE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 895

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  F++      + +  +P  K + SHGF L   G K+SKSLGN++DP+
Sbjct: 544 ADLYIEGSDQYRGWFNSSSNCGIIQNDLIPF-KSLVSHGFTLDENGNKMSKSLGNIVDPL 602

Query: 315 EVIEEVGVDALRYFL 329
           ++ ++ G D LR ++
Sbjct: 603 KICDQYGADILRLWV 617



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           Y N   H+GHA   I+ D + R    +G DV+F  G D HG  I  A 
Sbjct: 58  YANGSIHVGHALNKILKDFILRSWLYEGYDVVFIPGWDCHGLPIEHAV 105


>gi|258620350|ref|ZP_05715388.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262172241|ref|ZP_06039919.1| isoleucyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587229|gb|EEW11940.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261893317|gb|EEY39303.1| isoleucyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 949

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       +   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|258624722|ref|ZP_05719656.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258583009|gb|EEW07824.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 949

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 539 VWFDSGVTHSAVVDARSEFNGAEA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 592

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  +
Sbjct: 593 KEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLGADILRLWVASTDYTGEVAVSDE--I 650

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVL---QEI 401
            KR +AD    I N    +    L + +G  PT       +   L      R L   QEI
Sbjct: 651 LKR-SADAYRRIRN----TARFFLANLNGFNPTTDIIPVEEMVALDRWAVGRALAAQQEI 705

Query: 402 RENMQNQLIHRALAQVISLVS-EV---------DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  Q+  +H  + ++++  S E+         DR + A++    +++      T L+  
Sbjct: 706 IQAYQDYNLHAVVQRLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRS----CQTALFFI 761

Query: 452 VE-VIRQLAILLQAFVPKLANKI 473
           VE ++R +A ++     ++ N +
Sbjct: 762 VEALVRWMAPIMSFTADEIWNAM 784



 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ DV+ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDVIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|254448566|ref|ZP_05062025.1| leucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261755|gb|EDY86041.1| leucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 860

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 14/150 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 30  KESYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISD 115
                   +  +N    R     L  +YD       KR   TC        +  + ++ +
Sbjct: 90  KNQTAPAKWTYENIDYMRGQLKRLGFAYD------WKREFATCDPDYYRWEQWFFTQLYE 143

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           KG +YK   +  +   D+    +++V +G 
Sbjct: 144 KGLVYKKTSAVNWCPHDQTVLANEQVIEGC 173


>gi|50308367|ref|XP_454185.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643320|emb|CAG99272.1| KLLA0E05325p [Kluyveromyces lactis]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + +Y+     YP+   HIGH     I+DV+ RF++L G +VL   G D  G     AA  
Sbjct: 48  KNIYVLCMFPYPSGTLHIGHLRVYTISDVVNRFYQLKGYNVLHPMGWDAFGLPAENAAIE 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V   ++  +N    +    ++  + ++D  I T +  ++   + L+ ++   G     
Sbjct: 108 RKVNPAIWTKENIGKMKAQMGMMASNFNWDREIATCDPEYYKFTQKLFLELFKNG----- 162

Query: 123 CYSGWYSLRDEAYYNDDEV 141
                Y+ R EA  N D V
Sbjct: 163 -----YAYRKEAEINWDPV 176


>gi|313204144|ref|YP_004042801.1| isoleucyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443460|gb|ADQ79816.1| Isoleucyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 1119

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD    G D  R  F  ++  + ++  ++   K V S+G +L K G K+SK LGN +DP
Sbjct: 618 PADFISEGVDQTRGWFFTLHAISTMVKGSVAF-KSVISNGLVLDKNGNKMSKRLGNGVDP 676

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              IE+ G D LR++++   +   +  +D +G+
Sbjct: 677 FSTIEKYGSDPLRWYMMTNASPWDNLKFDSEGI 709


>gi|317495329|ref|ZP_07953699.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914751|gb|EFV36227.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 910

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +   N GV  K    
Sbjct: 59  YANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIEQVLVNNGVDRKSMPA 118

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +  + D  +D+   T + +       ++ K+ DKG 
Sbjct: 119 TKFRNKCKDYALKQVDKQREDFKKLGVIGD--WDNPYLTLDPKFEAEQIRVFGKMVDKGY 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 177 IYKGLKPIYWSPSSESALAEAEI 199



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T++       D+        +PADL++ G D  R  F++    +  +S   
Sbjct: 524 IMDVWFDSGTSHQGCCAVRDDLT------YPADLYLEGSDQYRGWFNSSLITSVAVSGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K++ S GF++   G K+SKSLGNVI P +V +++G + +R
Sbjct: 578 PY-KELVSAGFVMDGNGNKMSKSLGNVISPNDVGKQLGAEIIR 619


>gi|260583475|ref|ZP_05851223.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158101|gb|EEW93169.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 929

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 17/123 (13%)

Query: 217 GIKIPDDPQYI-------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           G   PD P  I       M VW D+ +++    G  +         +PAD+++ G D  R
Sbjct: 507 GFTHPDSPNGIFTKELDIMDVWFDSGSSHAGVLGTREELS------FPADMYLEGSDQYR 560

Query: 270 --FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
             F++    +  +    P  K V S GF++  +G+K+SKSLGNVI P + ++  G D +R
Sbjct: 561 GWFNSSLTTSVAIHHQAPY-KSVLSQGFVMDGEGKKMSKSLGNVISPAKEMKTKGADIIR 619

Query: 327 YFL 329
            ++
Sbjct: 620 LWV 622



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 55/146 (37%), Gaps = 23/146 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFV 73
           Y N   H+GHA   I  D + R   + G    F  G D HG  I +A  NA GV  K   
Sbjct: 58  YANGDVHMGHALNKISKDFIVRSKSMSGFRAPFVPGWDTHGLPIEQALANAEGVDRK--- 114

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR------------------HHDTCRILWKKISD 115
             +   FR +         D  RT  KR                    +  R+   K+++
Sbjct: 115 KMSVAEFRKLCAEYAWRQIDNQRTVFKRLGVTGTWDNPYVTLKPEFEAEQIRVF-GKMAE 173

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEV 141
            G IYKG    ++S   E+   + E+
Sbjct: 174 NGYIYKGLKPIYWSPSSESSLAEAEI 199


>gi|254510996|ref|ZP_05123063.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534707|gb|EEE37695.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 861

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 10/184 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR     G +VL   G D  G     AA
Sbjct: 41  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARHKLATGHNVLHPMGWDAFGMPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
             +G   K +   N  + R     L +S D   +F  T +  ++   + L+  + D G +
Sbjct: 101 MASGGHPKDWTYGNIADMRGQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDMLDAGLV 159

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  + D     +++V  G  G    A    V+  E   +FF++S Y ++LL+
Sbjct: 160 YRKNAVVNWDPV-DMTVLANEQVENGR-GWRSGAL---VERRELTQWFFKISDYSEELLN 214

Query: 179 YYES 182
             ++
Sbjct: 215 ALDT 218


>gi|119026468|ref|YP_910313.1| valyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118766052|dbj|BAF40231.1| Valyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 924

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L +
Sbjct: 535 IMDTWATSSLTPQIVTRWEEPGEENQAIFNATFPMDLRPQGQDIIRTWLFSTMDRAHLEN 594

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       G D
Sbjct: 595 KCLPWSNTTLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARLGLD 650

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTES-DESI 390
             YD+  +K  +   LA  + N    ++++  +D +  +  P          TE  D S 
Sbjct: 651 ATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAPAVAAWNPADVTEPIDRSA 708

Query: 391 LSVCSRVLQEIRENMQNQLIHRAL 414
           +S  + V++E  +++ N    +AL
Sbjct: 709 MSKMAAVVREATDDLNNYEHSKAL 732



 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R++G DV +  G D++G    +
Sbjct: 60  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMNGYDVFYPMGWDDNGLPTER 119

Query: 61  AAQN---AGVTTKVFVDQN--------SRNFRDMADVLDISYDDFIRTTEK 100
             QN     V T +  D N             D  D + IS  +FI   EK
Sbjct: 120 RVQNYYGVRVDTSLKYDPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEK 170


>gi|113953240|ref|YP_729567.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031893|sp|Q0IDA5|SYI_SYNS3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113880591|gb|ABI45549.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 968

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 13/86 (15%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PADL++ G D  R  F +    +  ++   P  + V +HGF L  KG K+SKSLGNV+D
Sbjct: 577 YPADLYLEGSDQHRGWFQSSLLTSVAVNGTAPY-RTVLTHGFALDEKGRKMSKSLGNVVD 635

Query: 313 PIEVIE---------EVGVDALRYFL 329
           P+ +IE           G D LR ++
Sbjct: 636 PMVIIEGGKNQKQEPAYGADVLRLWV 661


>gi|34556624|ref|NP_906439.1| isoleucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833215|sp|Q7MAL0|SYI_WOLSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34482338|emb|CAE09339.1| ISOLEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 915

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 14/112 (12%)

Query: 225 QYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFL 279
            +I+ VW D+ + +   L ++ Y       +A  +PA +++ G D  R  F +    +  
Sbjct: 534 HHILDVWFDSGSTWKAVLLSSAY-------EAGNYPASMYLEGSDQHRGWFQSSLLVSCA 586

Query: 280 LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++ + P  + + +HGF +  KGEK+SKS GNVI P +V++E G + LR ++ 
Sbjct: 587 INHHAPY-QSILTHGFTVDEKGEKMSKSKGNVIAPKDVLKEFGSEILRLWVA 637



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ D + ++H   G  V +  G D HG  I +  +
Sbjct: 59  YANGHLHIGHALNKILKDTIVKYHYFQGKKVSYVPGWDCHGLPIEQQVE 107


>gi|302332798|gb|ADL22991.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 917

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    A      
Sbjct: 524 IMDVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTAVATRGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 577 SPY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|261380603|ref|ZP_05985176.1| valine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796581|gb|EFC51928.1| valine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 943

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+  G+D  +  + R     K
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLID--GIDLEKLLVKRTTGLRK 585



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|212694501|ref|ZP_03302629.1| hypothetical protein BACDOR_04029 [Bacteroides dorei DSM 17855]
 gi|212663002|gb|EEB23576.1| hypothetical protein BACDOR_04029 [Bacteroides dorei DSM 17855]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKG 597

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             + D    I  P     + E   S+ ++   E+ +      +  AL  V  L      +
Sbjct: 598 WEVAD----IAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAVYKL------F 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
           +D    W L+   P     +   T E        L  LL  F+P +  +++  ++
Sbjct: 648 WDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEELWQHIY 702


>gi|281357939|ref|ZP_06244424.1| isoleucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315597|gb|EFA99625.1| isoleucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 1041

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 10/230 (4%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD    G D  R  F+ +   A  L    P  K V  +G +L   G+K+SK L N  DP
Sbjct: 544 PADFIAEGLDQTRGWFYTLVVLATALFDRPPF-KNVVVNGLVLAENGQKMSKRLRNYPDP 602

Query: 314 IEVIEEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           + V+   G DA+R F++  ++   +D  + + G+K+ +   +      L   +    +  
Sbjct: 603 MVVVNTYGADAVRLFMLGSQVVRAEDLKFSEAGVKEVLRGIMIPMWNALAFFTTYANVDH 662

Query: 373 YD---GMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           Y+   G +  P  A    D  ILS  S++++EIR  +    + +A  +    + ++  ++
Sbjct: 663 YNPGRGEVKPPAHASNVLDRWILSSASQMVEEIRGELDAYNLQKAANRFSRFIDDLTNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDIL 477
             +      K++ D      Y T+  V+   A     F+P     I+  L
Sbjct: 723 IRRSRRRFWKSSDDADKQEAYATLHYVLLTFAKTAAPFIPFTTEAIYRAL 772


>gi|145240291|ref|XP_001392792.1| isoleucyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134077307|emb|CAK45647.1| unnamed protein product [Aspergillus niger]
          Length = 1077

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 89/230 (38%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  DP
Sbjct: 550 FPGDFIAEGLDQTRGWFYTLTVLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMILK 371
             V+E  G DALR +L+       +    K+   K + A +   + N        + + K
Sbjct: 610 ALVMERYGSDALRLYLINSPVVRAEPLRFKESGVKEIVAKVLLPLWNSYKFFEGQAALFK 669

Query: 372 DYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              G   T     E+      D  IL+ C  +L+ + E M    ++  + +++ L+    
Sbjct: 670 KTQGFDYTFDPKAEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTT 729

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++       LK  N  D     L    EV+  L   L  F P L + I+
Sbjct: 730 NWYIRFNRRRLKGENGVDDTQHALNTLFEVLYTLVRGLAPFTPFLTDTIY 779


>gi|23012733|ref|ZP_00052746.1| COG0525: Valyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 406

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + ++ H  +   KG+K+SKS GN+IDP+++IE+ G DALR+ L    A G+D
Sbjct: 32  QDIYIHALVRDEKGQKMSKSKGNIIDPLDLIEKYGCDALRFTLSALAAQGRD 83


>gi|320169300|gb|EFW46199.1| valyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1108

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 46/197 (23%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVID 312
           F+P  L   G DIL F       F L+    LP K V+ H  +   +G K+SK+LGNVID
Sbjct: 629 FFPGSLLETGADILFFWVARMVFFSLALTDKLPFKDVYLHPIVRDAQGRKMSKTLGNVID 688

Query: 313 PIEVIE-------------------------------------EVGVDALRYFLVREIAC 335
           P++VI+                                     E G DALR+ L+  +  
Sbjct: 689 PVDVIQGISLQGLNDSLAGGNLDPKEYERALKNQKEVYPQGIPECGTDALRFALLSYLTA 748

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-----DGMIPTPGAFTESDESI 390
           G+D   + D  +  V     N + N    +++ + KD+     +  +      ++ D+ I
Sbjct: 749 GRD--INLDVTRVTVYRFFCNKLWNATKFAMANLGKDFVPAATESHLTADSGESKIDQWI 806

Query: 391 LSVCSRVLQEIRENMQN 407
           LS  +  +++    M+N
Sbjct: 807 LSRLANAIEQANNGMRN 823



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           HIGHA    + D L R+HR+ G   L+  GTD           +AG+ T+V V++
Sbjct: 166 HIGHALTNAVQDTLVRWHRMRGETTLWNPGTD-----------HAGIATQVVVEK 209


>gi|265750752|ref|ZP_06086815.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263237648|gb|EEZ23098.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFNNKIWNAFRLVKG 597

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             + D    I  P     + E   S+ ++   E+ +      +  AL  V  L      +
Sbjct: 598 WEVAD----IAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAVYKL------F 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIFDILF 478
           +D    W L+   P     +   T E        L  LL  F+P +  +++  ++
Sbjct: 648 WDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEELWQHIY 702


>gi|152980423|ref|YP_001352518.1| isoleucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166229744|sp|A6SW71|SYI_JANMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151280500|gb|ABR88910.1| isoleucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 958

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  FH+    + +++   P  K + +HGF +  +G+K+SKSLGN + P
Sbjct: 584 PADLYLEGSDQHRGWFHSSLLTSSMMNGRAPY-KALLTHGFTVDGEGKKMSKSLGNTLAP 642

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            ++ + +G D LR ++      G+    D+  + KRV 
Sbjct: 643 QKISDTLGADILRLWIASTDYSGELSISDE--ILKRVT 678



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R K  +     Y N   H+GHA   I+ D++ +  + DG D  +  G D HG  I   
Sbjct: 59  KGRPKFILHDGPPYANGDIHLGHAVNKILKDMIVKTRQFDGFDAPYVPGWDCHGMPIEIQ 118

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTE-KRHHDTCRI 108
                 K    A V +K     N +  R   D + +     +D   +T +     D  R 
Sbjct: 119 IEKQFGKNLPTAEVLSKARAYANEQVERQKKDFIRLGVLGQWDKPYKTMDFGNEADELRA 178

Query: 109 LWKKISDKGDIYKG 122
           L   + +KG +Y+G
Sbjct: 179 L-GSLLEKGYVYRG 191


>gi|88808557|ref|ZP_01124067.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
 gi|88787545|gb|EAR18702.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
          Length = 878

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 17/174 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    
Sbjct: 51  FYALSMFPYPSGTLHMGHVRNYVITDVIARAQRMRGDAVLHPMGWDAFGLPAENAAIERQ 110

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIYKGC 123
           +   ++ D+N    +   D L +S  D+ R     H D  R    L+ ++ D+G  Y+  
Sbjct: 111 IDPGIWTDRNIEQMKAQLDRLGLSI-DWSREQATCHADYYRWTQWLFLELLDQGLAYQKD 169

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAY 172
            +  +   D+    +++V   ++G+ + +     Q N  QW      F R++ Y
Sbjct: 170 ATVNWDPVDQTVLANEQV--DSEGRSWRSGALVEQKNLRQW------FLRITHY 215


>gi|113475381|ref|YP_721442.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964993|sp|Q114V5|SYL_TRIEI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110166429|gb|ABG50969.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 929

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 5/183 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  QPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + G+    +  +N    ++    L   I +D  + T    ++   + ++ +    G  Y+
Sbjct: 92  DRGIPPAKWTLENIAQMKEQLRRLGFSIDWDKEVATCTPEYYRWTQWIFLQFFQAGLAYQ 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V    +G+ + +     + M  + +FF+++ Y ++LL+  +
Sbjct: 152 KESAVNWDPIDQTVLANEQV--DGEGRSWRSGAKVERKMLRQ-WFFKITDYAEQLLNDLD 208

Query: 182 SHP 184
             P
Sbjct: 209 KLP 211


>gi|198429251|ref|XP_002129281.1| PREDICTED: hypothetical protein [Ciona intestinalis]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 5/177 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y  +   YP+ + H+GH     I+D +A +HR++G  V+   G D  G     AA 
Sbjct: 69  RKKFYCLSMFPYPSGKLHMGHVRVYTISDAMAHYHRMNGKQVIHPMGWDSFGLPAENAAL 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    + D+N +  +     L++   ++    T E  ++   + L+ ++   G  YK
Sbjct: 129 TRNLDPTEWTDKNIKYMKQQLMDLNLFMDWEREFSTCEPSYYKWTQALFVRMFHAGLAYK 188

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +   D     D++V    +G+ + +    V+    E +F R + Y   LL+
Sbjct: 189 QKALVNWDPVDNTVLADEQV--DEEGRSWRSG-ALVEKRSLEQWFLRTTQYAQSLLN 242


>gi|257125155|ref|YP_003163269.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049094|gb|ACV38278.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 930

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++ +     + P        PADL++ G D  R  F +    +   + + 
Sbjct: 536 IMDVWFDSGVSHRSVLVPRNLPR-------PADLYLEGSDQHRGWFQSSLLTSIASTKDA 588

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K++ +HGF +  +G K+SKSLGN I P ++ E+ G D LR ++
Sbjct: 589 PY-KRILTHGFTMDGQGRKMSKSLGNTILPKDITEKYGADILRLWV 633



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ ++ RL G +  +  G D HG  I
Sbjct: 66  YANGDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPI 109


>gi|256810785|ref|YP_003128154.1| isoleucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793985|gb|ACV24654.1| isoleucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 1039

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           KK   HGF L + G+K+SKSLGN+++P +V+E+ G D LR++L+      +D  +    +
Sbjct: 585 KKCLMHGFTLDEHGDKMSKSLGNIVNPDDVVEKYGADLLRFYLLSANKVWEDLRFVWSEM 644

Query: 347 KKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIR 402
              ++  L N + N    +V+ M+L   D   P    F    + D+ ILS  + V +   
Sbjct: 645 DDVLS--LFNTLWNAYMFAVNYMVL---DNFKPDEKYFEYLKDEDKWILSRINTVAKIAI 699

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYF---DAQKPWELKKTNPDR--ASTVLYVTVEVIR 456
           EN++    H     +   + +++ R++      + W+ +K + D+  A   LY    V+ 
Sbjct: 700 ENLEVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWK-EKEDVDKLAAYQTLYY---VLL 755

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
           +LA +L    P  A  I+  L   D
Sbjct: 756 KLATILAPVAPHTAEAIYQNLKTED 780



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I    +N
Sbjct: 37  KEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  A-GVTTK 70
             G+  K
Sbjct: 97  EFGIKNK 103


>gi|242278126|ref|YP_002990255.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121020|gb|ACS78716.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 831

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 31  ESRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARYKRMKGFNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A         +   N  + R     L  SYD
Sbjct: 91  AIKHNTHPAEWTYANIDDMRTQLKRLGYSYD 121



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 27/196 (13%)

Query: 246 DNPDGSKA-KFW-PADLHVIGKDILRFHAIYWPAFLL------SANLPLP-KKVFSHGFI 296
           D P  SK+ ++W P D ++ G +    H +Y   F           L  P K + + G +
Sbjct: 519 DAPFDSKSLEYWTPVDQYIGGIEHAILHLLYARFFTKILRDEGYTELSEPFKNLLTQGMV 578

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV+DP  +I + G DA R F++      KD  +   GL+         
Sbjct: 579 LKDGAKMSKSKGNVVDPNAMINKYGADATRLFILFASPPEKDLEWSDQGLE--------- 629

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-------LQEIRENMQNQL 409
           G    ++R +  + ++++G +   GA  +    + S   ++       ++    +M+N+ 
Sbjct: 630 GAHRFLNR-IWRLAEEFEGKLSATGACAKPSMELSSDAKKLRLKEHETVKRASRDMENKF 688

Query: 410 -IHRALAQVISLVSEV 424
             +  +A  + LV+E+
Sbjct: 689 QFNTVIAASMELVNEI 704


>gi|167520011|ref|XP_001744345.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777431|gb|EDQ91048.1| predicted protein [Monosiga brevicollis MX1]
          Length = 425

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI +   YP+   H+GH     I+D LAR+HRL G+ VL   G D  G     AA   G+
Sbjct: 58  YILSMFPYPSGNLHMGHVRVYTISDCLARYHRLKGVPVLHPMGWDAFGLPAENAAMERGL 117

Query: 68  TTKVFVDQNSRNFRD 82
               +    +R  RD
Sbjct: 118 DPARWTQSVTR-LRD 131


>gi|169596733|ref|XP_001791790.1| hypothetical protein SNOG_01135 [Phaeosphaeria nodorum SN15]
 gi|160707362|gb|EAT90784.2| hypothetical protein SNOG_01135 [Phaeosphaeria nodorum SN15]
          Length = 1163

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 21/196 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ ++Y+     YP+   H+GH     I+DVLARF  + G +VL   G D  G     AA
Sbjct: 122 DKGRIYVLPMFPYPSGTMHLGHLRVYTISDVLARFKHMQGYNVLHPIGWDAFGLPAENAA 181

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  + +  QN  + +    V+   +D   R            ++  +  +G  Y+ 
Sbjct: 182 IERGIHPEKWTLQNIESMKAQIKVMGGRWDWDAR------------IFLMLHQRGLAYQA 229

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS---- 178
                Y   D+    +++V   A+G  + +     + M ++ +F ++  YQ+ LLS    
Sbjct: 230 ESLVNYDPVDKTVLANEQV--DANGCSWRSGAKVDKLMLKQ-WFLKIKEYQEPLLSDLAA 286

Query: 179 --YYESHPEFILPIER 192
             +    PE +L ++R
Sbjct: 287 LAHNGRWPEKVLAMQR 302


>gi|154486273|ref|ZP_02027680.1| hypothetical protein BIFADO_00077 [Bifidobacterium adolescentis
           L2-32]
 gi|154084136|gb|EDN83181.1| hypothetical protein BIFADO_00077 [Bifidobacterium adolescentis
           L2-32]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+D+
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLHRMGLSFDN 154


>gi|55379286|ref|YP_137136.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232011|gb|AAV47430.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 892

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 38/244 (15%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           + D P D   A  W P D++V G++    H +Y   F        LL    P+ +++ + 
Sbjct: 518 FADAPFDQKTADEWLPVDVYVGGEEHAVLHLLYIRFFTRALSDIGLLDREEPV-ERLINQ 576

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G +LH GEK+SKS GN I P     E G +  R F++      +D  +    +    +  
Sbjct: 577 GTVLHSGEKMSKSKGNDIAP----HEYGAETTRLFVLSAAHPSQDFEWTVKDVSTAYD-- 630

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                     +++  ++ +Y     T    T+ D  +     R +  + E       HR 
Sbjct: 631 --------FQQTLYRLVTEYTDRTETRTESTDHDTYLEREIDRTIAAVTEEYDRFRFHRV 682

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + ++      + RY    +P++   +               +R LA L+    P LA ++
Sbjct: 683 IGEIQRFARLLGRYAGYDRPYQFAYSRG-------------LRVLAGLVAPIAPFLAEEM 729

Query: 474 FDIL 477
           + +L
Sbjct: 730 WQLL 733



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 6/114 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA----Q 63
           Y+     Y +   H+GH     I D  AR+ R+ G +VL   G D  G     AA     
Sbjct: 35  YVLGMFPYTSGSLHMGHIRNYAITDAYARYRRMAGDEVLHPMGWDAFGLPAENAAYKRDT 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +    T+  +DQ   + R+M    D S +  I T +  ++   + L+ +  D+G
Sbjct: 95  DPESWTRTCIDQMKDDLREMGFGYDWSRE--ITTCDPDYYQWNQWLFTQFYDEG 146


>gi|85714102|ref|ZP_01045091.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85699228|gb|EAQ37096.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 877

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  REKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYKRARGYNVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  K +   N    +     + +S D
Sbjct: 92  ERKIAPKAWTYDNIEAMKKQLRSIGLSLD 120



 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 29/47 (61%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G++
Sbjct: 628 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQ 674


>gi|256545768|ref|ZP_05473124.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase)(IleRS)
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398464|gb|EEU12085.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase)(IleRS)
           [Anaerococcus vaginalis ATCC 51170]
          Length = 1059

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 19/267 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    ++ VW D+     +   Y          ++PAD    G D  R  F+++   
Sbjct: 536 RVPD----VIDVWFDSGAMPFSQVHYPFAKGEDFENYFPADFICEGIDQTRGWFYSLMAI 591

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +++   P  K V  +  ++ K G+K+SKS GN ++P E+ ++ G DA+R++ +    C
Sbjct: 592 STIITGKAPY-KNVLVNDLVVDKNGQKMSKSKGNTLNPFELFDKYGADAVRFYSLYVSPC 650

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESIL 391
                +D+ GL + V  +    I N+ +  V     D  G+            E D+ + 
Sbjct: 651 WVPTKFDEKGLIE-VKNNFFRTIENVYNFFVLYANTDNIGLDEIKNFENVELEEIDKWLY 709

Query: 392 SVCSRVLQEIRENMQ----NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           S  + +L+   E M+    N+++H     V+  +S      + ++ W    T   +A  V
Sbjct: 710 SRLNSLLKAYYEQMESFDYNKVVHLVNDFVVEDLSNWYIRRNRKRFWREDLTESKKA--V 767

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
                +V+  L+ +     P ++ +I+
Sbjct: 768 YKTCFDVLLSLSKMTAPIAPFISEEIY 794


>gi|242242475|ref|ZP_04796920.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234049|gb|EES36361.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 916

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G L+         +PADL+  G D  R  F++    A       
Sbjct: 524 IMDVWFDSGSSH---RGVLET---RHELSFPADLYFEGSDQYRGWFNSSITTAVATRGQA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + SHGF++  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 578 PY-KFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFV 73
           Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    GV   K+ V
Sbjct: 58  YANGNLHMGHALNKIIKDFIVRYKTMKGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSV 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     ++ A   +DI   DF R            T    ++  +I L+ +++DKG IY
Sbjct: 118 AEFREKCKEFALKQIDIQKKDFKRLGVRGDFINPYITLTPEYEAAQIRLFGEMADKGLIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           KG    ++S   E+   + E+
Sbjct: 178 KGKKPVYWSPSSESSLAEAEI 198


>gi|126135780|ref|XP_001384414.1| isoleucyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126091612|gb|ABN66385.1| isoleucyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 1082

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 16/200 (8%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDG 345
           K V   G +L   G+K+SK L N  DP EV+ + G DALR +L+       +   + ++G
Sbjct: 589 KNVIVTGLVLAADGKKMSKRLKNYPDPSEVLNKYGADALRLYLINSPVVKAETLKFKEEG 648

Query: 346 LKKRVNADLANGIGN--LVSRSVSMILKD------YDGMIPTPGAFTESDESILSVCSRV 397
           +K+ V++ L     +   +  +V +  KD      YD  + +       D  +L+    +
Sbjct: 649 VKEVVSSVLLPWFNSYKFLKDAVDIFKKDNGVDFKYDESLVSTNVM---DRWMLASIQSL 705

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRY---FDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ I   MQ   ++  + +++S + E+  +   F+ ++       + D     L    E 
Sbjct: 706 IEFIHTEMQGYRLYTVVPRLLSFIDELTNWYIRFNRRRIKGYGDNDVDDTKKGLNTLAEA 765

Query: 455 IRQLAILLQAFVPKLANKIF 474
           +  L+  +  F P L++ IF
Sbjct: 766 LLTLSRAMAPFTPYLSDNIF 785


>gi|125542110|gb|EAY88249.1| hypothetical protein OsI_09701 [Oryza sativa Indica Group]
          Length = 741

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 14/110 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL F    W A +   
Sbjct: 440 DPD-VLDTWFSSGLFPLTVLGWPDDTADVKA-FYPGSVLETGHDILFF----WVARMVMM 493

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
              L  ++P  +KV+ H  I    G K+SKSLGNVIDP++VI  + ++ L
Sbjct: 494 GMQLGGDVPF-QKVYLHPMIWDAHGRKMSKSLGNVIDPVDVINGIPLEGL 542


>gi|269467789|gb|EEZ79547.1| isoleucyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 923

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  ++ + P  K+V +HGF +   G K+SKSLGNVI P 
Sbjct: 548 ADLYLEGSDQHRGWFQSSLISSVAINGHAPY-KQVLTHGFTVDQNGHKMSKSLGNVIPPQ 606

Query: 315 EVIEEVGVDALRYFLV 330
           +V+  +G D LR ++ 
Sbjct: 607 KVVNSLGADILRLWIA 622



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           + K  +     Y N   HIGHA   ++ D++ +   L G D  +  G D HG  I
Sbjct: 48  KSKFILHDGPPYANGDIHIGHAVNKVLKDIIVKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|15835193|ref|NP_296952.1| valyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285365|ref|ZP_06194759.1| valyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289381|ref|ZP_06195683.1| valyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336762|ref|ZP_07224964.1| valyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|12585352|sp|Q9PK91|SYV_CHLMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|7190615|gb|AAF39411.1| valyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 939

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 78/244 (31%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  + ++++ L  +  S    + P E     +++V + LKD  +SR+ + WG +IP   
Sbjct: 363 WFVSVDSFRESLREFVNSKEINLFPPEFIRNYLTWVNN-LKDWCISRQLW-WGHRIPVWH 420

Query: 222 ---------------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSK-- 252
                                 DP+       ++  W  +    LT  G+   P+ S   
Sbjct: 421 NKHDEEYVICFDGDGVPEEVAQDPESWYQDPDVLDTWFSSGLWPLTCFGW---PEESADL 477

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKG---------- 300
            KF+P  + V G DIL F  +     + SA +       VF HG I  K           
Sbjct: 478 RKFYPTSVLVTGHDIL-FFWVTRMVLMCSAMVDTKPFADVFLHGLIFGKSYKQYDDNGEW 536

Query: 301 -------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                    EK+SKS GNVIDPIE+I+  G DA+R+ L    +C
Sbjct: 537 TYVSGDQKREYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIDMYGADAVRFTLC---SC 593

Query: 336 GKDG 339
              G
Sbjct: 594 ANRG 597



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 47/175 (26%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN- 79
           H+GHA    + D+L R+ R+ G +V +  GTD           +AG+ T+  V+++ R+ 
Sbjct: 54  HMGHALVNTLQDMLIRYKRMKGFEVCWVPGTD-----------HAGIATQTVVERHLRSS 102

Query: 80  -------------------------------FRDMADVLDISYDDFIRTTEKRHHDTCRI 108
                                           R +    D S   F  T +   +   + 
Sbjct: 103 LGKRRTDFSREEFLKHVWEWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDPEANRAVKK 160

Query: 109 LWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +K + DKG IY+G Y   W  +   A  +D+  Y+  +G  Y  ++ PV   EE
Sbjct: 161 AFKVLFDKGVIYRGYYLVNWDPILQTALADDEVEYEEREGWLYYIRY-PVVNSEE 214


>gi|325105255|ref|YP_004274909.1| Isoleucyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974103|gb|ADY53087.1| Isoleucyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 1131

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 17/111 (15%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP--------------LPKKVFSHGFI 296
           AK +PAD    G D  R  F  ++  A LLS   P                K V S+G +
Sbjct: 614 AKAYPADFIAEGVDQTRGWFFTLHTIAALLSECSPEIKAVNFENGNQGIAFKNVISNGLV 673

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           L K G K+SK LGN +DP   IE+   DA R++++   +   +  ++ +GL
Sbjct: 674 LDKNGNKMSKRLGNAVDPFSTIEQYSADATRWYMISNASPWDNLKFNIEGL 724


>gi|284007685|emb|CBA73427.1| valyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 965

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 115/301 (38%), Gaps = 63/301 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +N +  K  F P D+ V G DI+ F    W A ++      
Sbjct: 486 VLDTWFSSGLWTFSTLGWPENSEALKT-FHPTDVLVSGFDIIFF----WIARMIMLTMYF 540

Query: 281 ------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV------------- 320
                    +P  K V+  G I   +G+KISKS GNVIDP+++I+ +             
Sbjct: 541 IKDENGQGQIPF-KTVYMTGLIRDEEGQKISKSKGNVIDPLDMIDGISLEDLVTKRTGNM 599

Query: 321 ------------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L    N    N
Sbjct: 600 MQPHLAEKIAKRTRKEYPQGIKAHGTDALRFTLAALASTGRDINWDMKRLTGYRN--FCN 657

Query: 357 GIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  +  D G       F+ +D  I++  ++ ++  RE + +     A  
Sbjct: 658 KLWN-ASRYVLMNTEGQDCGQQGGEMIFSLADRWIMAEFNQTVKLYREALDSYRFDIAAN 716

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +         D Y +  KP  + K N        Y  +E++  L  L    +P +   I
Sbjct: 717 ILYEFTWNQFCDWYLELSKP-AIHKGNEAEIRATRYTLIEILESLLRLAHPIIPFITETI 775

Query: 474 F 474
           +
Sbjct: 776 W 776



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D L R+ R+ G + L+ +GTD           +AG+ T++ V++
Sbjct: 63  HMGHAFQQTIMDTLIRYQRMQGKNTLWQSGTD-----------HAGIATQMVVER 106


>gi|330834208|ref|YP_004408936.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566347|gb|AEB94452.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 952

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++K + + A  YPN+  H+GH    +  DV AR+ R+ G +VLF  G    G  I   
Sbjct: 36  RDQKKFFTTVAFPYPNSPFHLGHGRTYVTGDVYARYMRMKGYNVLFPMGFHFTGTPIITM 95

Query: 62  AQNAGVTTKVFVD 74
           A +     K  +D
Sbjct: 96  ADDISKGDKELLD 108



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 27/227 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   G D++  H    I+  A +   +L  PK V  +GFIL++G K+SKSL N++
Sbjct: 584 WYPLDMRHSGPDLIPNHLSFFIFNHAGIFPESL-WPKGVAVNGFILYEGRKMSKSLRNIV 642

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + I+  G D +R  L   +    D  +   G K      +++ +      +      
Sbjct: 643 PLRKAIKMYGADVVRLSLSSLVDMNSDANFTDSGAK-----SISDSLKRFYELAQMKNGS 697

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDA 430
           D +G IP        ++ + S   R+++E+   M        + +++ +L S V+ YF+ 
Sbjct: 698 DIEG-IP--------EKWLRSKIQRMVKEVTPLMDEMRFREVVNELLFNLSSYVNEYFEM 748

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  E ++ N         V  EVI     ++  F P +A +I+ +L
Sbjct: 749 VRS-ESREYNEK-------VIKEVIELWTKMISPFSPHIAEEIWHML 787


>gi|328860750|gb|EGG09855.1| hypothetical protein MELLADRAFT_34324 [Melampsora larici-populina
           98AG31]
          Length = 1006

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 15/94 (15%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW+D+  ++LT             K   A+L + G D  R  F ++ W +    ++  
Sbjct: 550 MDVWLDSGMSWLT------------LKDQKANLVLEGSDQHRGWFQSLLWTSIACHSSES 597

Query: 286 LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
           + + V +HGFIL K G K+SKSLGNVI P++V++
Sbjct: 598 VYQSVVTHGFILDKNGRKMSKSLGNVISPMDVLD 631


>gi|315124571|ref|YP_004066575.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018293|gb|ADT66386.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 376

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D    K+W   D ++ G +    H +Y   F         L+ N P  + + + G +L  
Sbjct: 85  DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDR-LLTQGMVLKD 143

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           G K+SKS GNV+DP E+IE+ G D  R F++
Sbjct: 144 GAKMSKSKGNVVDPDEIIEKYGADTARLFIL 174


>gi|303234548|ref|ZP_07321185.1| isoleucine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494382|gb|EFL54151.1| isoleucine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 1035

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 18/233 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+++   + +++   P  K V  +  IL K G+K+SKS GN 
Sbjct: 543 KVFPADFINEGIDQTRGWFYSLLAISTMITGKAPY-KNVLVNDLILDKDGKKMSKSRGNT 601

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPIE+ ++ G D +R++ +          +D  GL++ V +       N  + +   + 
Sbjct: 602 IDPIELFDKYGADVVRFYSLYVSPPWIPTKFDVSGLQE-VESKFFRSFRN--TYNFFQMY 658

Query: 371 KDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVS 422
              D   PT   F E       D+ ILS  + + +   ENM ++  +  +A+ IS  ++ 
Sbjct: 659 ATTDETDPTE-YFVEYKDRAVIDKWILSKFTNLQKFYFENM-DKFEYTKVAREISNFVIE 716

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
           ++  ++  +      KT  D     +Y  T E++  L  L+  F P +A +++
Sbjct: 717 DLSNWYIRRNRRRFWKTEMDDDKKAVYNTTYEILVGLTKLIAPFTPFIAEEMY 769


>gi|301620268|ref|XP_002939512.1| PREDICTED: valyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 1188

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
           F+P  L   G DIL F    +      L+  LP  K+V+ H  +    G K+SKSLGNVI
Sbjct: 737 FYPGTLLETGHDILFFWVARMVMLGLTLTGKLPF-KEVYLHAVVRDAHGRKMSKSLGNVI 795

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI  + ++ L   L+       +    KDG K    +D  NGI    + ++   L 
Sbjct: 796 DPLDVINGITLEGLNKQLLESNLDPAELERAKDGQK----SDYPNGIPECGTDALRFALC 851

Query: 372 DY 373
            Y
Sbjct: 852 AY 853


>gi|223998058|ref|XP_002288702.1| leucyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975810|gb|EED94138.1| leucyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 907

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y+     YP+ A  H+GH      +DV++R+ R+   DVL   G D  G    + A
Sbjct: 101 KKKKYVLDMFPYPSGAGLHVGHPEGYTASDVMSRYWRMTQHDVLHPIGWDSFGLPAEQFA 160

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            N G   ++   +N  NF+    +L  SYD
Sbjct: 161 INTGTHPELTTAKNIANFKRQLQMLGFSYD 190


>gi|169824801|ref|YP_001692412.1| isoleucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831606|dbj|BAG08522.1| isoleucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 1035

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 18/233 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+++   + +++   P  K V  +  IL K G+K+SKS GN 
Sbjct: 543 KVFPADFINEGIDQTRGWFYSLLAISTMITGKAPY-KNVLVNDLILDKDGKKMSKSRGNT 601

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPIE+ ++ G D +R++ +          +D  GL++ V +       N  + +   + 
Sbjct: 602 IDPIELFDKYGADVVRFYSLYVSPPWIPTKFDVSGLQE-VESKFFRSFRN--TYNFFQMY 658

Query: 371 KDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVS 422
              D   PT   F E       D+ ILS  + + +   ENM ++  +  +A+ IS  ++ 
Sbjct: 659 ATTDETDPTE-YFVEYKDRAVIDKWILSKFTNLQKFYFENM-DKFEYTKVAREISNFVIE 716

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
           ++  ++  +      KT  D     +Y  T E++  L  L+  F P +A +++
Sbjct: 717 DLSNWYIRRNRRRFWKTEMDDDKKAVYNTTYEILVGLTKLIAPFTPFIAEEMY 769


>gi|229586962|ref|YP_002845463.1| isoleucyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511513|sp|C3PP60|SYI_RICAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|228022012|gb|ACP53720.1| Isoleucyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 1092

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 48/219 (21%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-- 345
              HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG  
Sbjct: 600 CICHGIILDSTGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKM 659

Query: 346 ------------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                                  N D   G  N  S++V                    D
Sbjct: 660 VFDTLRLFIKPIWNAYHFFTMYANTDSLKGKLNFSSKNV-------------------LD 700

Query: 388 ESILSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDR 443
             ILS     +Q+I E++ N   Q  + A+++   +++         + W+ +K T+   
Sbjct: 701 VYILSKLKIAVQKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKSEKDTDKQN 760

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           A   LY  ++    +AI + A VP ++  I+  L   +E
Sbjct: 761 AYNTLYSCLDT---MAIAMSALVPMISEAIYKGLHHCEE 796


>gi|119961299|ref|YP_948111.1| valyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119948158|gb|ABM07069.1| putative valyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 873

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 15/230 (6%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           +K +P DL   G DI+R    +    A  L  N P      S   +    +K+SKS GNV
Sbjct: 543 SKVYPFDLRPQGHDIIRTWLFSSAVRADALQKNAPWKHAAISGWILDPDRKKMSKSKGNV 602

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANG---IGNLVSRS 365
           + P +V+ E G DA+RY+       G D  Y+   +K  +R+   L N    + NL +  
Sbjct: 603 VVPTDVLNEYGSDAVRYWAA-SAKLGADTAYEIAQMKIGRRLAIKLLNASKFVLNLGATE 661

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-V 424
            S++  D   ++  P      D ++L+  S V+ +  +  +N    RAL    S   +  
Sbjct: 662 NSVVTSDL-SVLTNP-----LDRALLAQLSDVVAQSTKAFENYDYARALQITESFFWQFT 715

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           D Y +  K            ++VL      +  L  L   F+P    +++
Sbjct: 716 DDYVELIKDRAYGAAGEAEQASVLAALATTLDSLLRLFAPFLPFATEEVW 765



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   H+GH +     DV AR+ R+ G +V +  G D++G    +  
Sbjct: 49  REQVYSIDTPPPTASGSLHVGHMFSFTQTDVQARYMRMTGKNVFYPMGWDDNGLPTERRV 108

Query: 63  QN 64
           QN
Sbjct: 109 QN 110


>gi|118467113|ref|YP_879355.1| leucyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118168400|gb|ABK69297.1| leucyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 992

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 92  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGRNVLHALGFDAFGLPAEQYAV 151

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 152 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 180


>gi|73972165|ref|XP_532063.2| PREDICTED: similar to valyl-tRNA synthetase 2-like [Canis
           familiaris]
          Length = 1077

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 111/286 (38%), Gaps = 73/286 (25%)

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-H 298
           + PD   A+F+P  L   G D+L    ++W   +      L+  LP   KV  H  +   
Sbjct: 618 ETPD--LARFYPLSLLETGSDLL----LFWVGRMVMLGTQLTGQLPF-TKVLLHSMVRDG 670

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLA 355
           +G K+SKSLGNV+DP ++I  V +  L+  L       KDG  D   L     A   D  
Sbjct: 671 QGRKMSKSLGNVLDPRDIISGVELQVLQEKL-------KDGNLDSTELAIAAAAQRKDFP 723

Query: 356 NGI------------------GNLVSRSVSMILKDY------------------DGMIPT 379
           +GI                  G  V  SVS +L                     +G +P 
Sbjct: 724 HGIPECGTDALRFALCSHRALGGDVHLSVSEVLSSRHFCNKIWNALRFILNALGEGFVPQ 783

Query: 380 PG----AFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQVISLVSEVDRYFDAQK 432
           P       + +D  ILS  +   QE        +  LI  AL     L S  D Y +A K
Sbjct: 784 PAEELSPSSPTDAWILSRLAHTAQECERAFLARELPLITHALHH-FWLHSLCDVYLEAVK 842

Query: 433 PWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFDIL 477
           P      +P     VL+   +V +R LA L+    P LA +++  L
Sbjct: 843 PVLSHSPHPQGPPQVLFSCADVGLRLLAPLM----PFLAEELWQRL 884



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D           +AG+
Sbjct: 155 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWIPGSD-----------HAGI 203

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            T+  V++     R M    ++S + F+R   K
Sbjct: 204 ATQAVVEKQLWKERGMRR-HELSREKFLREVWK 235


>gi|45190649|ref|NP_984903.1| AER043Cp [Ashbya gossypii ATCC 10895]
 gi|44983628|gb|AAS52727.1| AER043Cp [Ashbya gossypii ATCC 10895]
          Length = 873

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R  +Y+ +   YP+   HIGH     I+D L RF+R+ G +V+   G D  G     AA 
Sbjct: 46  RPHMYVLSMFPYPSGMLHIGHLRVYTISDALNRFYRMKGYEVVHPMGWDAFGLPAENAAL 105

Query: 64  NAGVTTKVFVDQN-SRNFRDMADVL 87
             G+    +  QN +R  +   D+L
Sbjct: 106 ERGIAPADWTRQNIARMKQQKGDML 130


>gi|225352043|ref|ZP_03743066.1| hypothetical protein BIFPSEUDO_03651 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157290|gb|EEG70629.1| hypothetical protein BIFPSEUDO_03651 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+D+
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLHRMGLSFDN 154


>gi|225012387|ref|ZP_03702823.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003364|gb|EEG41338.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 1127

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 15/153 (9%)

Query: 257 PADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK LGN 
Sbjct: 631 PADYIAEGVDQTRGWFYTLHAIGTLVFGKKAY----KNVVSNGLVLDKSGQKMSKRLGNA 686

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVSMI 369
           +DP + +++ G DA R++++       +  +D +G+ + V       + N  S  S+   
Sbjct: 687 VDPFKTLDQYGADATRWYMISNANPWDNLKFDAEGIAE-VQRKFFGTLYNTYSFFSLYAN 745

Query: 370 LKDYDGMIPTPGAF---TESDESILSVCSRVLQ 399
           +  +D    TP  F   TE D  ILS    ++Q
Sbjct: 746 IDAFDPKKETPIPFENRTELDRWILSELHSLIQ 778


>gi|110004582|emb|CAK98919.1| probable isoleucyl-trna synthetase protein [Spiroplasma citri]
          Length = 908

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 19/205 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM VW D+  + L  T   + P          ++++ G D  R  F++    + + + 
Sbjct: 518 QDIMDVWFDSGVSNLAVTKEYNLPHS-------VNVYLEGIDQFRGWFNSSLITSVVATG 570

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           + P  + V SHGF    KG K+SKSLGNVI P+ + ++ G D LR + V  +    D   
Sbjct: 571 HAPY-QVVLSHGFANDEKGRKMSKSLGNVISPLSITDQCGADILRMW-VASVDYRDDVKI 628

Query: 342 DKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             + LK+   A   + N +  L++      L D++ +        E D  +L +     Q
Sbjct: 629 GSEILKQIAEAYRKIRNTLRFLLAN-----LNDFNPLTDLQPKLAEVDYYVLHLAREFQQ 683

Query: 400 EIRENMQNQLIHRALAQVISLVSEV 424
           ++ +N +  + +     + + V++ 
Sbjct: 684 KVNKNYEEFIFNNVYTLINNFVTKT 708



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
           Y N   H+GHA   I+ D + R++   G    +  G D HG  I  A   +GV  K 
Sbjct: 58  YANGDLHVGHALNKILKDFIVRYYNQKGFYSPWICGWDTHGLPIETAVVKSGVDRKT 114


>gi|32423702|gb|AAP81245.1| isoleucyl tRNA synthetase [Candidatus Portiera aleyrodidarum]
          Length = 948

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPI 314
           ADL++ G D  R  FH     +  +S + P   K+ SH F + K G+K+SKS+GNV+ P 
Sbjct: 565 ADLYLEGLDQYRGWFHTSLITSAAISGHAPF-NKLLSHCFTVDKNGQKMSKSIGNVVSPQ 623

Query: 315 EVIEEVGVDALRYFLVRE 332
            +I + G D LR ++V +
Sbjct: 624 TIISKYGADILRLWVVSK 641



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ +   L+G D  +  G D HG  I
Sbjct: 61  YANGHIHIGHAVNKILKDIIIKSKNLEGCDSWYVPGWDCHGLPI 104


>gi|85057815|ref|YP_456731.1| isoleucyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789920|gb|ABC65652.1| isoleucyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 903

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 14/107 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           IM VW D+ T+Y             + +   +D++  G D  ++   +  + ++S    N
Sbjct: 522 IMDVWFDSGTSYSVLK--------KRNQVLQSDVYFEGSD--QYRGWFNSSLIISVATQN 571

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
               K V +HGF+   +G+K+SKSLGNVIDP+ V E+ G D +R ++
Sbjct: 572 QAPYKTVITHGFVFDGEGKKMSKSLGNVIDPLTVAEQKGADIIRLWV 618



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----KAAQNAGVTTK 70
           Y N   H+GHA   I+ D + RF  + G    F  G D HG  I     K       T K
Sbjct: 60  YANGNIHMGHALNKILKDFIIRFRSMQGFYTPFIPGWDTHGLPIEAAVLKKTSKKAFTRK 119

Query: 71  VFVDQ 75
            F+D+
Sbjct: 120 SFLDK 124


>gi|108805230|ref|YP_645167.1| isoleucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108766473|gb|ABG05355.1| Isoleucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 1068

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 14/118 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAI 273
           +IP+    ++ VW D+ +      GY   P   +  F   +PAD    G D  R  F+++
Sbjct: 540 RIPE----VLDVWFDSGSMPFAQWGY---PRSGREHFRRQFPADFICEGVDQTRGWFYSL 592

Query: 274 YWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              + +L       K   + G IL  +G K+SKSLGNVIDP  + E+ G DALR+ L 
Sbjct: 593 LAVSTMLFGKSSY-KTCMALGIILDAEGRKMSKSLGNVIDPWSLFEKQGADALRWALC 649


>gi|260891264|ref|ZP_05902527.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859291|gb|EEX73791.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 930

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++ +     + P        PADL++ G D  R  F +    +   + + 
Sbjct: 536 IMDVWFDSGVSHRSVLVPRNLPR-------PADLYLEGSDQHRGWFQSSLLTSIASTKDA 588

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K++ +HGF +  +G K+SKSLGN I P ++ E+ G D LR ++
Sbjct: 589 PY-KRILTHGFTMDGQGRKMSKSLGNTILPKDITEKYGADILRLWV 633



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ ++ RL G +  +  G D HG  I
Sbjct: 66  YANGDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPI 109


>gi|121998615|ref|YP_001003402.1| isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166229742|sp|A1WY38|SYI_HALHL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121590020|gb|ABM62600.1| Isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 941

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   + T    L+  +G +    PADL++ G D  R  F +    +  +    
Sbjct: 533 ILDVWFDSGVTHATV---LEQREGLQV---PADLYLEGSDQHRGWFQSSLLSSAAIRQAA 586

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + V +HGF +  +G K+SKS GNV+ P +V++ +G D LR ++ 
Sbjct: 587 PY-RGVLTHGFTVDEQGHKMSKSRGNVVAPQDVMDRLGADILRLWVA 632



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           RE+  +     Y N   HIGHA   I+ D++ +   LDG D  +  G D HG  I  K  
Sbjct: 48  RERFILHDGPPYANGDIHIGHAVNKILKDIIVKARTLDGYDAPYIPGWDCHGLPIEHKVE 107

Query: 63  QNAG 66
           + AG
Sbjct: 108 EQAG 111


>gi|323137155|ref|ZP_08072234.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397513|gb|EFY00036.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 877

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 36/87 (41%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+ + H+GH     + DV+AR+ R  G DVL   G D  G     AA   
Sbjct: 35  KYYVLEMFPYPSGRLHMGHVRNYSMGDVIARYMRAKGYDVLHPMGWDAFGLPAENAAAQT 94

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           G     +   N    R     L +S D
Sbjct: 95  GAHPATWTYANIAAMRAQLKTLGLSLD 121


>gi|171742865|ref|ZP_02918672.1| hypothetical protein BIFDEN_01981 [Bifidobacterium dentium ATCC
           27678]
 gi|283456106|ref|YP_003360670.1| leucyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171278479|gb|EDT46140.1| hypothetical protein BIFDEN_01981 [Bifidobacterium dentium ATCC
           27678]
 gi|283102740|gb|ADB09846.1| leuS Leucyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+D+
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLHRMGLSFDN 154


>gi|109946734|ref|YP_663962.1| isoleucyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362804|sp|Q17ZG3|SYI_HELAH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|109713955|emb|CAJ98963.1| ileS [Helicobacter acinonychis str. Sheeba]
          Length = 921

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K K  P+++ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSASTF---KAVLEDYHGEKGKS-PSNVVLEGSDQHRGWFQSSLLLGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVA 638



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           Y N   H+GHA   I+ D++ +     G  V FT G D HG  I +
Sbjct: 59  YANGHLHLGHALNKILKDIVVKREYFKGKKVYFTPGWDCHGLPIEQ 104


>gi|71030468|ref|XP_764876.1| isoleucyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351832|gb|EAN32593.1| isoleucyl-tRNA synthetase, putative [Theileria parva]
          Length = 1129

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)

Query: 221 PDDPQY--------IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR-- 269
           P  P+Y        I   W ++ +  L    Y  +N D     F PA+    G D  R  
Sbjct: 579 PRGPEYPPLRRIPEIFDCWYESGSMPLAKIHYPFENKDSLDQHF-PANFIAEGLDQTRGW 637

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           F+ +   + LL    P  K V  +G IL   G+K+SK L N  DP+++I + G D+LR F
Sbjct: 638 FYTLMVLSTLLFNKSPF-KNVIVNGLILASDGKKMSKRLKNYPDPLDIINQFGADSLRLF 696

Query: 329 LVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           L+   A   +   +  D ++   K V     +    LV       +      +P P A  
Sbjct: 697 LISSPAVKAEPVRFSTDSVRNVLKDVILPWFHSYRFLVQEVTRYEVTHKMKFVPDPEAPF 756

Query: 385 ES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           +S    D  I ++   ++  +   M+N  ++  + +++S + ++  ++       ++ T 
Sbjct: 757 KSSCVMDRWINTITQELIYSVHHEMENYKLYNVMPKLLSFLEQLTNWYIRINRERMRGTF 816

Query: 441 PDRASTV----LYVTVEVIRQLAILLQAFVPKL 469
            D    V    L+ +++    L  +   F  ++
Sbjct: 817 GDEECVVSLQSLFTSLKTFNHLMSMFAPFTSEM 849


>gi|297183629|gb|ADI19755.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 938

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +       D  D      WPADL++ G D  R  F +       +    P  
Sbjct: 531 VWFDSGVTHDCVLRQRDTLD------WPADLYLEGSDQHRGWFQSSLLTGVAIHQGAPY- 583

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           + V +HGF +   G K+SKSLGN+I   + ++E+G D LR ++
Sbjct: 584 RSVLTHGFTVDGDGRKMSKSLGNIIPAGKAMQELGADVLRLWV 626



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K++    +     Y N Q H+GHA   I+ D++ +   L G +  +  G D HG  I
Sbjct: 46  KDKPTFILHDGPPYANGQLHVGHAINKILKDIIIKSKTLSGFNAPYVPGWDCHGLPI 102


>gi|302379745|ref|ZP_07268230.1| isoleucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312652|gb|EFK94648.1| isoleucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 1035

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 18/233 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+++   + +++   P  K V  +  IL K G+K+SKS GN 
Sbjct: 543 KVFPADFINEGIDQTRGWFYSLLAISTMITGKAPY-KNVLVNDLILDKDGKKMSKSRGNT 601

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPIE+ ++ G D +R++ +          +D  GL++ V +       N  + +   + 
Sbjct: 602 IDPIELFDKYGADVVRFYSLYVSPPWIPTKFDVSGLQE-VESKFFRSFRN--TYNFFQMY 658

Query: 371 KDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVS 422
              D   PT   F E       D+ ILS  + + +   ENM ++  +  +A+ IS  ++ 
Sbjct: 659 ATTDETDPTE-YFVEYKDRAVIDKWILSKFTNLQKFYFENM-DKFEYTKVAREISNFVIE 716

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
           ++  ++  +      KT  D     +Y  T E++  L  L+  F P +A +++
Sbjct: 717 DLSNWYIRRNRRRFWKTEMDDDKKAVYNTTYEILVGLTKLIAPFTPFIAEEMY 769


>gi|301154981|emb|CBW14444.1| isoleucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 941

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPQRDAVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++      +EI+E   N   H  + +++   S
Sbjct: 689 AVACALDAQKEIKEAYDNYQFHTVVQRLMRFCS 721


>gi|330428848|gb|AEC20182.1| leucyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 885

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     AA 
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENAAI 97

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            + V    +   N     +  + M   +D S +  +   + +++   + L+ ++ +KG  
Sbjct: 98  KSQVPPAKWTYDNIAYMKKQMKAMGLAIDWSRE--MCACDPKYYKWNQWLFLQMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+      +   D+    +++V    DG+ + +    V+  E  GY+ R++ Y ++LL 
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEKREIPGYYLRITDYAEELLG 210


>gi|306822683|ref|ZP_07456061.1| leucine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309800923|ref|ZP_07695055.1| leucine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304554228|gb|EFM42137.1| leucine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308222459|gb|EFO78739.1| leucine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+D+
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLHRMGLSFDN 154


>gi|326771843|ref|ZP_08231128.1| valine--tRNA ligase [Actinomyces viscosus C505]
 gi|326637976|gb|EGE38877.1| valine--tRNA ligase [Actinomyces viscosus C505]
          Length = 938

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 14/150 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +  +    +G+L + D    + +P DL   G+DI+R   F  +   A L  A 
Sbjct: 555 IMDTWATSSLSPQLASGWLSDED-LFGRVYPMDLRPQGQDIIRTWLFTTVV-RANLEFAA 612

Query: 284 LPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           LP      S G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D  
Sbjct: 613 LPWTNAGLS-GWILDSDHK--KMSKSKGNVVTPMGLLEQYGSDAVRYW-ASSARLGLDAA 668

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +++  +K  +   LA  + N    ++SM L
Sbjct: 669 FEETQIK--IGRRLAIKVLNASKFALSMGL 696



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H+GH +     D +ARF R+ G  V +  G D++G    +  QN
Sbjct: 77  HVGHVFSYTHTDTVARFQRMRGKAVFYPMGWDDNGLPTERRVQN 120


>gi|212715894|ref|ZP_03324022.1| hypothetical protein BIFCAT_00802 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661261|gb|EEB21836.1| hypothetical protein BIFCAT_00802 [Bifidobacterium catenulatum DSM
           16992]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+D+
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLHRMGLSFDN 154


>gi|152967386|ref|YP_001363170.1| leucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189030283|sp|A6WDL7|SYL_KINRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151361903|gb|ABS04906.1| leucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 855

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y+     YP+   H+GHA    + DV+AR+    G DV+   G D  G     AA
Sbjct: 60  ERPKKYVLDMFPYPSGDLHMGHAEAYALGDVIARYWLQRGFDVMHPIGWDAFGLPAENAA 119

Query: 63  QNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              G+  + +    + Q   + R  A   D  +D  + T++  ++   + L+ K+ +KG 
Sbjct: 120 IKRGLDPRRWTYDNIAQQRASMRRYACSFD--WDRVLHTSDPEYYRWNQWLFLKLYEKGL 177

Query: 119 IYK 121
            Y+
Sbjct: 178 AYR 180



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 30/192 (15%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++ + G +   G  +SKS GN++   + +EE GVDA+R  L    A   +   D      
Sbjct: 607 RLLNQGMVQMDGSAMSKSKGNIVRLSDQLEEHGVDAIR--LTMAFAGPPEDDIDW----- 659

Query: 349 RVNADLA-NGIGNLVSRS--VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
              AD++ +G    + R+  ++  +    G+ PT G     D ++ SV  R L E+ +++
Sbjct: 660 ---ADVSPSGSAKFLGRAWRLARDVTSEPGVDPTTG-----DAALRSVTHRTLHEVSQHV 711

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +    + A+A+++ LV+   +  D         + P      +   VE     A++L  F
Sbjct: 712 EAFRFNVAVARLMELVNATRKAID---------SGPGAGDPAVREAVEAT---AVVLSLF 759

Query: 466 VPKLANKIFDIL 477
            P  A  ++ +L
Sbjct: 760 APYAAEDMWSLL 771


>gi|325108687|ref|YP_004269755.1| leucyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968955|gb|ADY59733.1| leucyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 1017

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 17/153 (11%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           KLY+     YP+A   H+GH       D+++R+ R+ G  VL   G D  G    + A  
Sbjct: 83  KLYVLDMFPYPSANGLHVGHPEGYTATDIVSRYARMQGKHVLHPMGWDAFGLPAEQHAIK 142

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   +     N  NFR    +L  SY D+ R       D  R  W +      I+   +
Sbjct: 143 TGTHPRETTYANIDNFRRQLQMLGFSY-DWSREVSTTDEDYVR--WTQW-----IFLQLF 194

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + W+    E        + G DG+    +  P+
Sbjct: 195 NSWFDPEFE--------WTGPDGKQRTGKGRPI 219



 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 37/184 (20%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +  K+SKS GNVI+P EV++  G DALR + +      +   +   G++         G+
Sbjct: 782 RAHKMSKSRGNVINPDEVVDIYGADALRLYEMFMGPLEQTKPWSMSGVE---------GV 832

Query: 359 GNLVSRSVSMILKDY-DGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
              + R   MI  D  +  +  P     A TE  + +L    R ++ + E++     + A
Sbjct: 833 FRFLGRVWRMIADDSAEEPVINPDVQDVAATEEQDRVL---HRTIKAVTEDIDKLSFNTA 889

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +++++  V+E    F  QKP       P  A          +    +LL  F P LA ++
Sbjct: 890 ISRMMEFVNE----FSGQKP------RPKAA----------MADFTLLLAPFAPHLAEEL 929

Query: 474 FDIL 477
           +++L
Sbjct: 930 WELL 933


>gi|269976839|ref|ZP_06183814.1| leucyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269935036|gb|EEZ91595.1| leucyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 986

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +R+K +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 48  LAKRDKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 107

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   ++   +N  N       + +S+D
Sbjct: 108 QYALQTGQHPRITTHENVDNMSRQLARIGLSHD 140


>gi|256381051|ref|YP_003104711.1| leucyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255925354|gb|ACU40865.1| leucyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 934

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIA 59
           +KL++     YP+ A  H+GH    I  DV AR+HR+ G +VL T G D  G    Q   
Sbjct: 52  DKLFVQDMFPYPSGAGLHVGHPLGFIGTDVYARYHRMTGRNVLHTMGFDAFGLPAEQYAV 111

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMA 84
           +  Q+   TTK  ++   R  R + 
Sbjct: 112 RTGQHPRETTKANIETYLRQIRRLG 136


>gi|225175106|ref|ZP_03729102.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169282|gb|EEG78080.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 822

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 18/190 (9%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++ + G +   G K+SKS GNV+ P E+IE+ G D  R F++      KD  +   G++ 
Sbjct: 566 RLLAQGMVNKDGAKMSKSKGNVVSPDEIIEKYGADTGRLFILFAAPPEKDLDWSDRGVEG 625

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                        V R V     D  G       + + D+ +       L+++ E+++ +
Sbjct: 626 CYR------FLKRVWRLVDRYADDVRGQNGETAEYDKQDQELRRAAHTALKKVTEDIEER 679

Query: 409 L-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A++ V+  V+    Y + ++         D  +T      E +  L ++L  F P
Sbjct: 680 FNFNTAISAVMEAVNTAYGYMNEKE---------DHINTA--AMAEFLEMLVLVLAPFAP 728

Query: 468 KLANKIFDIL 477
            L  ++++ L
Sbjct: 729 HLGEEMWERL 738



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+ + H+GH     I DVLARF  + G  VL   G D  G     AA 
Sbjct: 30  KKKYYVLEMFPYPSGRLHMGHMRVYSIGDVLARFLNMRGYSVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V    +   N    +     L ISYD
Sbjct: 90  ERQVHPAEWTYANIEAMKKQQKALGISYD 118


>gi|319760262|ref|YP_004124200.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318038976|gb|ADV33526.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 951

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 6/106 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + + +    LD     + K    DL+V G D  R  F +    +  ++   
Sbjct: 539 VLDVWFDSGSTHDSVI--LDKFQSLQHKELKIDLYVEGSDQYRGWFMSSLITSVAINNKA 596

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K+V SHGF +  +G K+SKSLGN+I P ++I++ G D LR ++
Sbjct: 597 PY-KQVLSHGFTVDSQGNKMSKSLGNIISPKDIIDKFGSDVLRLWI 641



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 11/90 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   I+ D++ +F  L G +  +  G D HG  I    +     T  +  
Sbjct: 59  YANGQIHLGHAINKILKDIILKFKGLSGYNAPYIPGWDCHGLPIELKVEQLIKKTGSY-- 116

Query: 75  QNSRNFRDMADV--------LDISYDDFIR 96
            N+ +F++   +        ++I   DFIR
Sbjct: 117 -NNIDFKEFCSICRKYALEQIEIQKRDFIR 145


>gi|307699755|ref|ZP_07636810.1| leucine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307615058|gb|EFN94272.1| leucine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 986

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           + +R+K +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 48  LAKRDKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 107

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNF 80
           Q   +  Q+  +TT   VD  SR  
Sbjct: 108 QYALQTGQHPRITTHENVDNMSRQL 132


>gi|304313869|ref|YP_003849016.1| leucyl-tRNA synthetase [Methanothermobacter marburgensis str.
          Marburg]
 gi|302587328|gb|ADL57703.1| leucyl-tRNA synthetase [Methanothermobacter marburgensis str.
          Marburg]
          Length = 938

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          +REK++++ A  YP+   HIGH     + DV ARF R+ G +VLF       G  +   A
Sbjct: 23 DREKIFLTVAYPYPSGAMHIGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAPVIGIA 82

Query: 63 QN 64
          + 
Sbjct: 83 RR 84



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 22/246 (8%)

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDI----LRFHAIYWPAFLLSANLPLPKKVFSH 293
           +L  TG  D      + ++P D  +  KD+    L FH  +  A    +  P    VF  
Sbjct: 543 FLGETGAGDELREEFSYWYPLDWRLSAKDLIGNHLTFHIFHHSAIFPESRWPRGVVVFGM 602

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDKDGLKKRVNA 352
           G +  +G K+S S GNVI   + IE  G D +R FL+      +D  + +K+ +  R   
Sbjct: 603 GLL--EGNKMSSSKGNVILLRDAIERHGADVVRLFLMSSAEPWQDFDWREKEVIGTRRRI 660

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC--SRVLQEIRENMQNQLI 410
           +     G  VS     I      +   P    ES      +C  +  ++E  E +++   
Sbjct: 661 EWFREFGERVSE----IWDGELALSELPEFEPESFAGKWMICQLNHRIREATEALESFQT 716

Query: 411 HRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +A+ + + L+  +VD Y        + + +      V  V   V+     L+  F P  
Sbjct: 717 RKAVQEALYLLKKDVDHY--------MARVDGRVDVEVKMVLAHVLSAWIRLMAPFTPYT 768

Query: 470 ANKIFD 475
           A ++++
Sbjct: 769 AEEMWE 774


>gi|254447495|ref|ZP_05060961.1| isoleucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198262838|gb|EDY87117.1| isoleucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 673

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           PADL++ G D    H  ++ + LL+      +P  K+V +HGF +   G K+SKS GN I
Sbjct: 552 PADLYLEGSDQ---HRGWFQSSLLTGVGLRGIPPYKQVMTHGFTVDSHGHKMSKSQGNGI 608

Query: 312 DPIEVIEEVGVDALRYFLV 330
           +P E+I  +G D LR ++ 
Sbjct: 609 EPQEIINSLGADILRLWVA 627



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 15/99 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKI 58
            Y+     Y N   H+GHA   I+ D++ +   LDG    +  G D HG        +KI
Sbjct: 51  FYLHDGPPYANGDIHLGHAVNKILKDIIVKSKTLDGYYAPYVPGWDCHGLPIELKVEKKI 110

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRD-MADVLDISYDDFIR 96
            KA Q      KV      +  R+  A  +D    DFIR
Sbjct: 111 GKAGQ------KVSAADFRKACREYAAQQVDGQRKDFIR 143


>gi|67458621|ref|YP_246245.1| valyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536913|sp|Q4UMX8|SYV_RICFE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|67004154|gb|AAY61080.1| Valyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 859

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 43/280 (15%)

Query: 227 IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W   +++  L+T G  D+   +K    K +P +L     +I+R  A Y    A L 
Sbjct: 502 VMDTWATSSVSPQLSTHGISDDFTVNKERHDKLFPMELRPQAHEIIRTWAFYTILKAHLH 561

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 562 QNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KLGADTA 620

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM---ILKDYDGMIPTPGAFTESDESILSVCSRV 397
           Y +D +K      L N + N  ++ VS+    LKD D               +L V  ++
Sbjct: 621 YSEDVMKN--GKRLVNKLWN-AAKFVSIHFEKLKDKD-----------KQAKLLDVKEKI 666

Query: 398 LQEIRENMQNQLI-----------HRALAQVISLVSE------VDRYFDAQK--PWELKK 438
             E  + M N+L+           +   A  + L  +       D Y +  K   ++ + 
Sbjct: 667 TNEFDQWMINKLVELVKLATNELQNYEYANAMHLTEKFFWAIFCDNYLEISKNRAYDEEN 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            NP    + +      ++ L  L   F+P +  +++ IL+
Sbjct: 727 KNPSGQYSSILTLYHTMQILLKLFAPFMPHITEELYQILY 766


>gi|119025882|ref|YP_909727.1| leucyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|189082983|sp|A1A1R2|SYL_BIFAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118765466|dbj|BAF39645.1| leucyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 990

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   +      YP+ +  H+GH    +  DV++R+HR+ G +VL   G D  G    + A
Sbjct: 64  RPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              G   ++  +QN  N R     + +S+D+
Sbjct: 124 VQTGQHPRITTEQNIANMRRQLHRMGLSFDN 154


>gi|226225924|ref|YP_002760030.1| leucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089115|dbj|BAH37560.1| leucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 811

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 7/175 (4%)

Query: 7   LYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            Y      YP+A+  H+G+ +    +D+ ARFHRL G DV    G D  G      A   
Sbjct: 40  FYALMMFPYPSAEGLHVGNLFAFTGSDISARFHRLIGHDVFQPLGFDAFGIHSENYALKV 99

Query: 66  GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G        +N  NF    +     I ++  + T+   ++   + ++ ++  +G  YK  
Sbjct: 100 GAHPMELTPKNVGNFTRQLERAGFMIDWNQKVDTSRADYYKWTQWVFLQLHKQGLAYKKA 159

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            +  +   D+    +++V  G   +   A    V+    E +FFR+S Y  +LLS
Sbjct: 160 AAVNWCPTDKTVLANEQVEGGLCERCGTA----VEQRFLEQWFFRISEYAPRLLS 210



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 23/138 (16%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG I+ +G K+SKS GNVI+P + +EE G DA R +L+      + G +   G+     
Sbjct: 580 AHGMIIREGAKMSKSKGNVINPDQYMEEWGADAFRMYLMFLGPYEEGGDFRDQGI----- 634

Query: 352 ADLANGIGNLVSR---SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
               +G+   + R   SV   ++D              D  ++    R ++++ E+  N 
Sbjct: 635 ----SGVRRFLDRLWASVRDAVRD-----------GSPDPDVIRKLHRTIKKVGEDSANL 679

Query: 409 LIHRALAQVISLVSEVDR 426
             + A+A ++  ++ V R
Sbjct: 680 GYNTAIAAMMEYMNAVRR 697


>gi|237840177|ref|XP_002369386.1| valyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211967050|gb|EEB02246.1| valyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1042

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +  G+ DN +  +A F+P  L   G DIL F    W A ++  +L L
Sbjct: 501 VLDTWFSSGLFPFSVFGWPDNTEDIQA-FFPTSLLETGHDILFF----WVARMVMMSLQL 555

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
             K     VF H  +    G+K+SKS GNVIDP+EVI  + +  L+
Sbjct: 556 TDKLPFDTVFLHAMVRDAHGQKMSKSKGNVIDPLEVISGISLQDLQ 601


>gi|189030340|sp|A0Q8W7|SYL_MYCA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 969

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 157


>gi|213962968|ref|ZP_03391227.1| leucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954309|gb|EEB65632.1| leucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 945

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D++AR+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIVARYKRHKGFNVLHPQGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    V   QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPAVTTAQNIARYREQLDKIGFSFD 119



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 41/181 (22%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P ++ E+ G D LR +         + F       K  N    +G+ N
Sbjct: 719 EKMSKSKYNVVNPDDICEQYGADTLRLY---------EMFLGPLEQAKPWNTAGISGVYN 769

Query: 361 LVSRSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + +   +   D    +    PTP         +L    + ++++ E+++N   + +++Q
Sbjct: 770 FLRKLWRLYFNDNGWQVTDEAPTP--------EMLKALHKTIKKVNEDIENFSFNTSVSQ 821

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  V+E+           LK  + D           V+  LA+L+  F P +A +++  
Sbjct: 822 FMICVNELS---------SLKCHHRD-----------VLAPLAVLVAPFAPHIAEELWKR 861

Query: 477 L 477
           L
Sbjct: 862 L 862


>gi|149176990|ref|ZP_01855599.1| putative leucyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148844245|gb|EDL58599.1| putative leucyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 974

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++KLY+     YP+ +  H+GH       D++ R  R+ G  VL   G D  G    + A
Sbjct: 32  KDKLYVLDMFPYPSGEGLHVGHPEGYTATDIVCRHARMQGKQVLHPMGWDAFGLPAEQHA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++   +N   FR    +L  SYD
Sbjct: 92  IKTGTPPRITTQKNIDTFRRQLKMLGFSYD 121



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 31/178 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P  V+E+ G DALR + +         F       K  +    +G+   
Sbjct: 742 KMSKSRGNVINPDVVVEQYGADALRMYEM---------FMGPLEATKPWSMSGVDGVSRF 792

Query: 362 VSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + R   +I+ +    +    A T+   DE  L +  + ++ + E+++    + A+++++ 
Sbjct: 793 LGRVWRLIIDEKQEEVTLSQAVTDDKPDEDQLRILHKTIKAVSEDIEKLSFNTAISRMM- 851

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  + +A  P + +             + EV+    +LL  F P +A +++ +L
Sbjct: 852 ------EFTNAMGPLKTR-------------SKEVLSDFVLLLSPFAPHIAEELWSVL 890


>gi|41406146|ref|NP_958982.1| leucyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|60390723|sp|Q744V3|SYL_MYCPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|41394494|gb|AAS02365.1| LeuS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 969

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 157


>gi|242374048|ref|ZP_04819622.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348238|gb|EES39840.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
          Length = 368

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG 300
           D  K K W P DL++ G +    H +Y   W   L    +   K    K+++ G IL +G
Sbjct: 78  DPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEG 137

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++   G D LR + +          + ++GL         +G  
Sbjct: 138 NEKMSKSKGNVINPDDIVSSHGADTLRLYEMFMGPLDAAIAWSENGL---------DGSR 188

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +I+ + DG +        +D+S+  V ++ ++++ E+      + A++Q++ 
Sbjct: 189 RFLDRVWRLIVTE-DGTL-NNKIVDSNDKSLDKVYNQTVKKVTEDFNALSFNTAISQLMV 246

Query: 420 LVSEVDRYFDAQKPW 434
            +++  +  +  KP+
Sbjct: 247 FINDCYKANEIYKPY 261


>gi|224437054|ref|ZP_03658035.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143526|ref|ZP_07805719.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128557|gb|EFR46174.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 935

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 13/114 (11%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF----WPADLHVIGKDILRFHAIYWPAFLL 280
           ++I+ VW D+ +   T +  L N   +K  +     PAD+++ G D  R    +  + LL
Sbjct: 533 KHILDVWFDSGS---TWSAVLKNNYQTKNAYDAGEHPADMYLEGSDQHR--GWFQSSLLL 587

Query: 281 S---ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           S   + +   K++ +HGF   + GEK+SKS GNVI P E+I+  G + LR ++ 
Sbjct: 588 SCAVSKIAPYKQILTHGFTFDRNGEKMSKSKGNVIAPSEIIKTQGSEILRLWVA 641



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ ++H   G ++ +T G D HG        QKI K  ++  
Sbjct: 58  YANGHLHIGHALNKILKDIIVKYHYFKGENIRYTPGWDCHGLPIEQQVEQKIGKTKKDNL 117

Query: 67  VTTKV----------FVDQNSRNFRDMADVLDIS 90
             TK+          F++  S  F+ +  + D S
Sbjct: 118 EKTKLRELCRNHAQKFIEIQSEEFQALGVLGDFS 151


>gi|308185182|ref|YP_003929315.1| isoleucyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308061102|gb|ADO02998.1| isoleucyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 48/245 (19%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY+   + W+ L DE +  +D    G+         N ++ +E     F  S+ +++L +
Sbjct: 409 IYRAT-TQWFILMDEPFIQND----GSQKTLREVALNAIEKVE-----FVPSSGKNRLKT 458

Query: 179 YYESHPEFILP------------IERRNEVISFVKSGLKDLS--LSRKTFD--WGIKIPD 222
             E+ P++ L             I++R     F    L+  +    +K  D  W   + D
Sbjct: 459 MIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHAAHLFEKKGCDVWWEYSVKD 518

Query: 223 --DPQY------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              P Y            I+ VW D+ + +      L++  G K +  P+D+ + G D  
Sbjct: 519 LLPPSYQEDAKHYEKVMHILDVWFDSGSTF---KAVLEDYHGEKGRS-PSDVILEGSDQH 574

Query: 269 R--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +
Sbjct: 575 RGWFQSSLLIGCVLNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVV 633

Query: 326 RYFLV 330
           R ++ 
Sbjct: 634 RLWVA 638


>gi|257386964|ref|YP_003176737.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169271|gb|ACV47030.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 919

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 50/250 (20%)

Query: 247 NPDGSKAKF-------W-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKV 290
           NPD S A F       W P D++V G +    H +Y   F        LL    P+  ++
Sbjct: 519 NPDLSTAPFENEVADDWLPVDVYVGGDEHAVLHLLYIRFFTRALADLGLLDRREPV-DRL 577

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            + G +LH GEK+SKS GN + P     E G +  R F++     G+D  +         
Sbjct: 578 VNQGTVLHGGEKMSKSKGNDVAP----HEYGAETTRLFVLSAAHPGQDFEW--------T 625

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQN 407
             D++N           M+L   DG     G  TES   D  +     R +  + +    
Sbjct: 626 ATDVSNAY-EFQQDVYRMVLSFTDGA----GGRTESRPHDAYLEREIDRTIAAVTDEYDR 680

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              HR + ++      + RY + + P+    +               +R L  LL    P
Sbjct: 681 FRFHRVVTELQQFAQLLRRYREYETPYRFAYSR-------------GLRVLTKLLAPLAP 727

Query: 468 KLANKIFDIL 477
            LA +++  L
Sbjct: 728 YLAEELWSAL 737



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 21/208 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y+     Y +   H+GH     I D +AR+ R++G DVL   G D  G     AA  
Sbjct: 35  EGTYVLGMFPYTSGSLHMGHIRNYAITDAVARYRRMNGEDVLHPMGWDAFGLPAENAAYE 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI-YK 121
                + +        RD  + +   YD    I T E  ++   + L+ +  +   + Y 
Sbjct: 95  RDTDPESWTRTCIEQMRDELERMGFGYDWSREITTCEPEYYRWNQWLFTRFYENDLVEYT 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG-------------ADGQYYNAQ-HNPVQWMEEEGYFF 167
           G    W     E    D +V +G             ADG+    +    V+  E + +FF
Sbjct: 155 GAQVNWCP-DCETVLADAQVDEGDGHADVRDDTPGHADGEGVCWRCGTAVETRELDQWFF 213

Query: 168 RLSAYQDKL---LSYYESHPEFILPIER 192
            ++ Y D+L   L   +  PE +  I+R
Sbjct: 214 TITDYADELADGLDALDGWPESVREIQR 241


>gi|227874745|ref|ZP_03992898.1| leucine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227844520|gb|EEJ54676.1| leucine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 989

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +R+K +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 51  LAKRDKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   ++   +N  N       + +S+D
Sbjct: 111 QYALQTGQHPRITTHENVDNMSRQLARIGLSHD 143


>gi|148239596|ref|YP_001224983.1| leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|189083176|sp|A5GL71|SYL_SYNPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147848135|emb|CAK23686.1| Leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 878

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 17/174 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    
Sbjct: 51  FYALSMFPYPSGSLHMGHVRNYVITDVIARAQRMRGDSVLHPMGWDAFGLPAENAAIERQ 110

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIYKGC 123
           V   V+ D+N    +     L +S  D+ R     H D  R    L+ ++ D+G  Y+  
Sbjct: 111 VDPGVWTDRNIEQMKAQLARLGLSI-DWSREQATCHADYYRWTQWLFLELMDQGLAYQKD 169

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA-----QHNPVQWMEEEGYFFRLSAY 172
            +  +   D+    +++V   ++G+ + +     Q N  QW      F R++ Y
Sbjct: 170 ATVNWDPVDQTVLANEQV--DSEGRSWRSGALVEQKNLRQW------FLRITNY 215


>gi|90407186|ref|ZP_01215374.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311762|gb|EAS39859.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 944

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 230 VWIDALTNYLTTTGYLDN---PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T +    G        DGS A     DL++ G D  R  F +    +  +    
Sbjct: 535 VWFDSGTTHTAVVGMRPEYIKEDGSVADI---DLYLEGSDQHRGWFQSSLMTSMAIKNKA 591

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+V +HGF++   G+K+SKS+GNV+ P  V+  +G D LR ++ 
Sbjct: 592 PY-KEVLTHGFVVDGDGKKMSKSIGNVMSPQVVMNNLGADVLRLWVA 637


>gi|99079886|ref|YP_612040.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379171|sp|Q1GKN8|SYL_SILST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|99036166|gb|ABF62778.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 857

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
            +G   K +   N     +    L +S D      T +  ++   + L+    +KG +Y 
Sbjct: 91  ASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W  + D     +++V  G  G    A    V+  E   +FF++S Y D+LL
Sbjct: 151 KNAVVNWDPV-DMTVLANEQVENGR-GWRSGAL---VERRELTQWFFKISDYSDELL 202



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 29/173 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 628 KMSKSKNNVVDPLAIISTYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 685

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M           P A  E DE +L    + ++++   +++   + A+A++    
Sbjct: 686 CDRIGEM----------DPDAKGEGDEELLREMHKAIRDVTLGVESFGFNAAIAKLYGFT 735

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +                +AS    V  + I+ LA L+    P LA  I+
Sbjct: 736 NTLSK---------------SKASAA--VQKQAIKTLAQLMSPMTPHLAEDIW 771


>gi|255534571|ref|YP_003094942.1| leucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340767|gb|ACU06880.1| Leucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 937

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R +G +VL   G D  G    + 
Sbjct: 29  QKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHEGYNVLHPVGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G    +  +QN   + +    +  S+D    + E R  D+    W +      I+ 
Sbjct: 89  AIQTGTHPAITTEQNITRYEEQLRKIGFSFD---WSREVRTSDSSYYKWTQW-----IFI 140

Query: 122 GCYSGWYS 129
             ++ WY+
Sbjct: 141 ELFNSWYN 148


>gi|224024319|ref|ZP_03642685.1| hypothetical protein BACCOPRO_01042 [Bacteroides coprophilus DSM
           18228]
 gi|224017541|gb|EEF75553.1| hypothetical protein BACCOPRO_01042 [Bacteroides coprophilus DSM
           18228]
          Length = 892

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 15/107 (14%)

Query: 245 LDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFI 296
           ++NP   + K++   ADL V G DI+ F    W A ++ A      ++P  K V+  G +
Sbjct: 491 INNPGNEEIKYYYPTADL-VTGPDIIFF----WVARMIMAGYEYMGDMPF-KNVYFTGIV 544

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             K G K+SKSLGN  DP+++I++ G D +R  ++     G D  +D
Sbjct: 545 RDKIGRKMSKSLGNSPDPLDLIDKYGADGVRMGMMLSAPAGNDILFD 591


>gi|325478520|gb|EGC81632.1| leucine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 800

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++  G D  G     
Sbjct: 29  KNKKKFYPLVEFPYPSGQGLHVGHPRPYTALDVVARKRRLEGENVMYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +      + N +NF+     +  S+  D  I TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNKIHPAKVTEDNIKNFKAQMKSIGFSFDWDREINTTDPDYYKWSQWIFIQMYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            YK   S  +    +    ++EV    DG+        V  M+ + +  +++ Y D+L+
Sbjct: 149 AYKNEMSVNWCPSCQVGLANEEV---VDGKCERCGTEVVHKMKNQ-WMLKITEYADRLI 203



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 27/177 (15%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHKG-EKISKSL 307
           P D +  G +    H +Y   W  FL    + +P     KK  SHG IL    +K+SKS 
Sbjct: 526 PVDWYNGGMEHTTLHLLYSRFWHKFLYDIGV-VPTKEPYKKRTSHGMILGSDHQKMSKSR 584

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI+P ++I + G D LR + +          +  +G++         G    + R  +
Sbjct: 585 GNVINPDDIIRDYGADTLRCYEMFMGDFSSMAIWSDEGVR---------GCRKYLERVFN 635

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +     + ++    ++++  E ++   ++ ++++ E+ +N   + A+AQ+++L++E+
Sbjct: 636 L-----NEIVENGDSYSKDLEVVI---NQTIKKVSEDYENLKFNTAIAQLMTLLNEM 684


>gi|306818041|ref|ZP_07451772.1| leucine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649005|gb|EFM46299.1| leucine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 989

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +R+K +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 51  LAKRDKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G   ++   +N  N       + +S+D
Sbjct: 111 QYALQTGQHPRITTHENVDNMSRQLARIGLSHD 143


>gi|300310736|ref|YP_003774828.1| isoleucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300073521|gb|ADJ62920.1| isoleucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 964

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 8/104 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + T    L      + +F PADL++ G D  R  FH+    + +L+   P  
Sbjct: 565 VWFDSGSTHQTV---LRGSHRQELQF-PADLYLEGSDQHRGWFHSSLLTSSMLNGRAPY- 619

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + +HGF++  +G K+SKSL N ++P +V + +G + LR ++ 
Sbjct: 620 KALLTHGFVVDGEGRKMSKSLKNGVEPQKVADSLGAEILRLWVA 663



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 14/132 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R K  +     Y N + H+GHA   I+ D++ +   + G D  +  G D HG        
Sbjct: 65  RPKFILHDGPPYANGEIHLGHAVNKILKDMIVKARNMAGFDAQYVPGWDCHGMPIEIQIE 124

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTE-KRHHDTCRILW 110
           +K  K    A V  K     N +      D + +     +D+  +T       D  R L 
Sbjct: 125 KKYGKNLPVAEVQAKARAYANEQIALQKKDFIRLGVLGEWDNPYKTMNFSNEADELRAL- 183

Query: 111 KKISDKGDIYKG 122
            KI +KG +Y+G
Sbjct: 184 GKILEKGYVYRG 195


>gi|254773100|ref|ZP_05214616.1| leucyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 969

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 157


>gi|288574736|ref|ZP_06393093.1| leucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570477|gb|EFC92034.1| leucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 835

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 21/199 (10%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+ A  H+GH       D+  RF R+ G  VL   G D  G      A 
Sbjct: 34  KRRYVLDMFPYPSGAGLHVGHPEGYTATDIYCRFLRMKGYAVLHPMGFDSFGLPAENYAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    V  ++N   FR+    L  SY  D  + T +  ++   + ++ K+ +KG  Y+
Sbjct: 94  KTGTHPVVTTERNIERFREQIKSLGFSYDWDREVSTHKSDYYRWTQWIFLKLFEKGLAYE 153

Query: 122 G------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                  C S    L +E          GA  +  N +    QW+       R++AY ++
Sbjct: 154 AETPINWCPSCQTGLANEEVKEGRCERCGAQVERRNLR----QWI------LRITAYAER 203

Query: 176 LLSYYE--SHPEFILPIER 192
           LL   +    PE I  ++R
Sbjct: 204 LLQDIDKVEWPEAIKAMQR 222


>gi|90421808|ref|YP_530178.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|122995674|sp|Q21CM7|SYL_RHOPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90103822|gb|ABD85859.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 882

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 20/179 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + +DG+K         G   
Sbjct: 633 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEDGVK---------GASR 683

Query: 361 LVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            V R V  ++      +P PG     A   + +++     R L EI   +     + A+A
Sbjct: 684 FVQR-VWRLVSAMAPQLPAPGTRLDAANHPAAQALRVAAHRTLSEILAGIDRLRFNTAVA 742

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++   V E++    A  P      +P  A+       E I  L +L+   +P LA + +
Sbjct: 743 KLYVYVGELEAVL-ANAPQGGLGGDPVLAAAAR----EAIDILVLLIAPMMPHLAEECW 796



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 8/178 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              V  K +   N    +     + +S D   +F       +    R+    ++      
Sbjct: 93  ANKVHPKSWTYANIATMKAQLKSMGLSLDWSREFATCDPSYYKHQQRMFIDFLAAGLVER 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K     W  + +    N+  +    DG+ + +    V+  E   +FF++S Y + LL+
Sbjct: 153 KQSKVNWDPVDNTVLANEQVI----DGRGWRSGAL-VEQRELTQWFFKISKYSEDLLT 205


>gi|308069985|ref|YP_003871590.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859264|gb|ADM71052.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 812

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 9/182 (4%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 37  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQHA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   +    +N  NFR     L  SY  D  I TT+  ++   + ++ ++  +G  Y
Sbjct: 97  LDTGEHPREITVKNVNNFRRQIKSLGFSYDWDREISTTDPDYYKWTQWIFIQLYKRGLAY 156

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                  W         N++ +    DG+     H PV       +  +++ Y D+LL  
Sbjct: 157 VAEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVVRKPMRQWMLKITEYADRLLED 211

Query: 180 YE 181
            E
Sbjct: 212 LE 213



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEK 302
           K + W P DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK
Sbjct: 524 KQREWMPVDLYIGGAEHAVLHLLYARFWHKVLYDIGVVETKEPFYKLVNQGMILGNNNEK 583

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GNVI+P +++   G D LR +
Sbjct: 584 MSKSRGNVINPDDIVNTFGADTLRIY 609


>gi|289192671|ref|YP_003458612.1| isoleucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939121|gb|ADC69876.1| isoleucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 1039

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 34/44 (77%), Gaps = 1/44 (2%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           KK   HGF L + G+K+SKSLGN+++P +V+E+ G D LR++L+
Sbjct: 585 KKCLMHGFTLDEHGDKMSKSLGNIVNPDDVVEKYGADLLRFYLL 628



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I    +N
Sbjct: 37  EEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  -------AGVTTKVFVDQNSRNFRDMA 84
                    + TK+ V+Q     ++ A
Sbjct: 97  EFGIKNKKEIETKIGVEQFIEKCKEFA 123


>gi|261338690|ref|ZP_05966574.1| valyl-tRNA synthetase [Bifidobacterium gallicum DSM 20093]
 gi|270276239|gb|EFA22093.1| valyl-tRNA synthetase [Bifidobacterium gallicum DSM 20093]
          Length = 966

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 22/145 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR---FHAIYWPAFLL 280
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R   F ++   A L 
Sbjct: 520 IMDTWATSSLTPQIVTHWAEPGEANEALFHATFPMDLRPQGQDIIRTWLFSSVD-RAQLE 578

Query: 281 SANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-- 335
           +  LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+     AC  
Sbjct: 579 NNCLPWANAALS-GWILDPDHK--KMSKSKGNVVVPNEPIEKYGADAVRYW----AACAR 631

Query: 336 -GKDGFYDKDGLK--KRVNADLANG 357
            G D  YD+  +K  +R+   L N 
Sbjct: 632 LGLDATYDEGQMKIGRRLAIKLLNA 656



 Score = 43.9 bits (102), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     D++ARF R++G DV +  G D++G    +
Sbjct: 45  RDRDAVYSIDTPPPTVSGSLHVGHVFSYTHTDIIARFKRMNGFDVFYPMGWDDNGLPTER 104

Query: 61  AAQN 64
             QN
Sbjct: 105 RVQN 108


>gi|78212910|ref|YP_381689.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123743315|sp|Q3AJU8|SYL_SYNSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78197369|gb|ABB35134.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 875

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 1/105 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   +  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 49  EKPGFFALSMFPYPSGSLHMGHVRNYVITDVIARVQRMLGHAVLHPMGWDAFGLPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               V    + D+N    R   D L +S  D+ R     H D  R
Sbjct: 109 IERNVDPGEWTDRNIDQMRAQLDRLGLSI-DWSREQATCHSDYYR 152



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        +  
Sbjct: 633 EKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLWR 690

Query: 361 LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           LV    + I    D + P   P   +++D  +       ++ + E++ +++      Q+ 
Sbjct: 691 LVEAGSARI----DSLEPMQRPADLSDADSDVRRALHLAIEAVSEDLSDEI------QLN 740

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +SE+ +  +A     +  T  D  S    V  E +  L  LL  F P LA + ++ L
Sbjct: 741 TAISELMKLSNA-----ISSTGIDALSAP--VLQEALSGLVRLLAPFAPHLAEEFWNRL 792


>gi|332039104|gb|EGI75526.1| isoleucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 953

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 14/158 (8%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP  +  +++   ++   + G++  + SR T    +   D P Y     I+ VW D+ 
Sbjct: 509 ELHPRTMEILDQAAAIVE--QGGIE--AWSRVTTAEILGAADAPHYDKSSDILEVWFDSG 564

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSH 293
           + +         P G       ADL++ G D  R  FH+    A  +    P  K + +H
Sbjct: 565 STFWHVLRGTHAP-GFHETGPEADLYLEGHDQHRGWFHSSLLLACAIYGRAPY-KGLLTH 622

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GF +  +G K+SKSLGN IDP+E+ +++G + +R ++ 
Sbjct: 623 GFTVDAQGRKMSKSLGNGIDPMEMSKKLGAEIIRLWVA 660



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + K  +     Y N Q H+GHA   I+ D++ +  +L+G D L+T G D HG  I  A
Sbjct: 56  KPKFILHDGPPYANGQLHMGHAVNKILKDMITKARQLEGYDALYTPGWDCHGLPIENA 113


>gi|319952746|ref|YP_004164013.1| isoleucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421406|gb|ADV48515.1| Isoleucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 1134

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+ ++  A ++  ++   K V S+G +L K G+K+SK LGN 
Sbjct: 632 KTFPADFIAEGVDQTRGWFYTLHAIATMVFDSVAY-KNVVSNGLVLDKEGKKMSKRLGNA 690

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            DP E + E G DA R++++       +  +D +G+
Sbjct: 691 ADPFETMNEHGADATRWYMISNANPWDNLKFDIEGI 726


>gi|269940686|emb|CBI49066.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 917

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E  N V         ++   R+  D    G   P  P         IM
Sbjct: 466 FYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIM 525

Query: 229 YVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L+  P+ S    +PAD+++ G D  R  F++    +       P
Sbjct: 526 DVWFDSGSSH---RGVLETRPELS----FPADMYLEGSDQYRGWFNSSITTSVATRGVSP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K + SHGF +  +G+K+SKSLGNVI P +V+++ G D  R ++
Sbjct: 579 Y-KFLLSHGFFMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV 622



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIR-----------TTEKRHHDT 105
               GV  K     ++  FR+       + +++   DF R            T K  ++ 
Sbjct: 105 LTKKGVDRK---KMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEA 161

Query: 106 CRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +I ++ +++DKG IYKG    ++S   E+   + E+
Sbjct: 162 AQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 198


>gi|59410396|gb|AAW84295.1| putative isoleucyl-tRNA synthetase [uncultured Poribacteria
           bacterium 64K2]
          Length = 1060

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 23/194 (11%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN IDP  ++ E G DA+R+++           +  +G+ + +   +   + 
Sbjct: 604 GQKMSKSRGNTIDPWTILNEQGADAMRWYMFTATTPWTPRAFKSEGIDEALKKFMGT-LQ 662

Query: 360 NLVSRSVSMI-LKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           N+ S  V    L+  D +   P     +  D  ILS    ++  +R+ M+N  +  A   
Sbjct: 663 NVYSFFVMYANLERVDVLHEAPPVSERATVDRWILSRLHTLIDRVRDEMENYHLTNAPRA 722

Query: 417 VISLVSEV---------DRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFV 466
           +   V ++         DR++ A+         PD+ +   Y T+ EV+  +A L   FV
Sbjct: 723 IELFVDDLSNWYVRRSRDRFWGAE-------AGPDKHAA--YATLYEVLVTVAKLAAPFV 773

Query: 467 PKLANKIFDILFVA 480
           P  A++++  L  +
Sbjct: 774 PFFADELYRNLVCS 787


>gi|15920845|ref|NP_376514.1| leucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|48428671|sp|Q974N4|SYL1_SULTO RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA
           ligase 1; Short=LeuRS 1
 gi|15621629|dbj|BAB65623.1| 945aa long hypothetical leucyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 945

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 18/162 (11%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
           S+ K+W P D    G+D+++ H  Y+    F +     LP+++ ++GFI   G+K+SKS 
Sbjct: 571 SEFKYWYPVDSRHSGRDLIQNHLPYYLFHHFAIFGEKFLPRQIVTNGFIRVGGKKMSKSF 630

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN+      I+E GV+ +R  L    +   D  +         N+++A  I   + +   
Sbjct: 631 GNIYPLNRAIDEYGVETVRIALTSTSSISDDIEF---------NSNIAKSIAEQLKKIHD 681

Query: 368 MILKDYDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQN 407
           +I K    ++   G     D  +  LS+  R ++++ +  +N
Sbjct: 682 LISK----LLEIEGVNERRDPDVWLLSIFRRYIEDVDKAYEN 719



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ++ K +I+ A  Y N+  HIGH    I AD+ AR+ R+ G +VLF       G  I   +
Sbjct: 31 DKPKKFITVAFPYTNSPLHIGHGRTYITADIYARYLRMKGYNVLFPFAFQFTGTPILSIS 90

Query: 63 QNA 65
          ++ 
Sbjct: 91 ESV 93


>gi|319406587|emb|CBI80229.1| Isoleucyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 971

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 17/131 (12%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
           WPAD++  G D    H  ++ + LL +         K V +HGF L   G K+SKSLGN 
Sbjct: 595 WPADVYFEGSDQ---HRGWFQSSLLESCGTRTCSPYKTVVTHGFTLDENGRKMSKSLGNT 651

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV---NADLANGIGNLVSRSVS 367
           I P ++I+  G D  R +++         +++   L K++   N DL   + N +   + 
Sbjct: 652 IMPQDIIKTSGADIFRLWVM------TTDYWEDQRLGKKILQTNVDLYRKLRNAIRWMLG 705

Query: 368 MILKDYDGMIP 378
           +++ D    IP
Sbjct: 706 ILVYDEGEEIP 716



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQNAGVTT- 69
           Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG     KI +  +  G +  
Sbjct: 65  YANGNIHIGHALNKVLKDVIVRSFQMRGFNANYVPGWDCHGLPIEWKIEEKYRAQGKSKD 124

Query: 70  KVFVDQNSRNFRDMADV-LDISYDDFIR 96
            VF+ +  +  RD A   + +  ++F R
Sbjct: 125 DVFLSEFRQECRDFAQSWITVQSEEFKR 152


>gi|213963215|ref|ZP_03391472.1| valyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954077|gb|EEB65402.1| valyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 877

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 26/233 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHKGE-KISKSLG 308
           ++P +  V G DIL F    W   ++ A            V+  G +  K   K+SKSLG
Sbjct: 486 YYPTNDLVTGPDILFF----WVTRMIVAGYEYKGERPFSNVYLTGLVRDKQRRKMSKSLG 541

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  D +++I + G D +R  L+   A G D  +D+   ++        G GN +  +  +
Sbjct: 542 NSPDALKLIADYGADGVRVGLLLSSAAGNDLLFDEALCQQ------GKGFGNKLWNAFQL 595

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           +       +  P A   + +   +  + VL E+ ++ +   I  AL  +  L       +
Sbjct: 596 VKGWQVDTVEQPAAAQLALQWFEAKFNAVLTEVEDHFEKYRISDALMAIYKLT------W 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVI----RQLAILLQAFVPKLANKIFDIL 477
           D    W L+   P+    +   T E +      L  LL  F+P L  +I+  L
Sbjct: 650 DDFCAWLLEMVKPEYGKPMDKATYEGVVAAFENLLKLLHPFMPFLTEEIWQSL 702


>gi|15612382|ref|NP_224035.1| isoleucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|8928388|sp|Q9ZJJ1|SYI_HELPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4155922|gb|AAD06890.1| ISOLEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 27/263 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCVLNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGK 337
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++       ++   +
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVAFNDYQNDLRVSQ 650

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             F   +   K+      N +  L++    M LK+    +  P  F+  D  IL     +
Sbjct: 651 TFFIQTEQHYKK----FRNTLKFLLANFSDMDLKN----LERPHDFSPLDHFILEALETI 702

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEV 454
              +    +   + + L  +++ V+      Y DA K        N ++   +  V + V
Sbjct: 703 SAGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQAIQMVLLAV 762

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
             QL   L    P L + I ++L
Sbjct: 763 ASQLCYFL---APILTHTIEEVL 782


>gi|307947205|ref|ZP_07662540.1| valyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770869|gb|EFO30095.1| valyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 977

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G  +  DP  ++  W  +     +T G+ D       +++  D+ + G DI+ F    W 
Sbjct: 535 GKTLTRDPD-VLDTWFSSGLWSFSTLGWPDKT-AELERYYKTDVLITGFDIIFF----WV 588

Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   +    +V  H   ++       G+K+SKS+GNV+DP+++I+  G DA R+ LV
Sbjct: 589 ARMMMQGIHFMDEVPFHTVYINSIVVDKNGKKMSKSVGNVLDPLDLIDRFGADATRFALV 648

Query: 331 REIACGK 337
            +   G+
Sbjct: 649 SQEVQGR 655



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N   H+GHA    + D+L R+ R+ G D L+  GTD  G
Sbjct: 48 NGSLHMGHALNNTLQDILIRWKRMQGFDTLWQPGTDHAG 86


>gi|255320684|ref|ZP_05361861.1| isoleucine--tRNA ligase [Acinetobacter radioresistens SK82]
 gi|262380684|ref|ZP_06073837.1| isoleucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302300|gb|EET81540.1| isoleucine--tRNA ligase [Acinetobacter radioresistens SK82]
 gi|262297632|gb|EEY85548.1| isoleucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 946

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 27/195 (13%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY------IMYVWIDA 234
           E HP     IE   EV   ++    D   +R+  D+   I DD ++       + VW D+
Sbjct: 497 ELHPRTPELIE---EVAKLIEQEGIDAWFNREAKDF---IGDDAEHYNAVRDTLDVWFDS 550

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFS 292
            T +      LD  +  ++   PADL++ G D  R  F +    +  +    P  K + +
Sbjct: 551 GTTHYAV---LDQREDLES---PADLYLEGSDQHRGWFQSSLLTSIAIHNRAPY-KALLT 603

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGL 346
           HGF +   G K+SKSLGN I   ++I+++G D LR ++       EIA  K+ F      
Sbjct: 604 HGFTVDENGRKLSKSLGNYIPLDDIIKQLGADGLRLYVASSDYRYEIAASKEVFNRVSDS 663

Query: 347 KKRVNADLANGIGNL 361
            +R+   L   + NL
Sbjct: 664 YRRIRNTLRFLLANL 678



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 9/99 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I  K  
Sbjct: 57  KKKYILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLSGFDAPYVPGWDCHGLPIELKVE 116

Query: 63  QNAGVTTKVFVDQNSRNFRDM-----ADVLDISYDDFIR 96
           +  G   KV    ++  FR +     +  +D+  +DF R
Sbjct: 117 EKVG---KVGEKVDAATFRKLCREYASQQIDLQRNDFKR 152


>gi|241663923|ref|YP_002982283.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865950|gb|ACS63611.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 959

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 25/242 (10%)

Query: 246 DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           D PDG  A     DL++ G D  R  FH+    A +L    P  K + +HGF +  +G K
Sbjct: 580 DLPDGRLA-----DLYLEGSDQHRGWFHSSLLTASMLYGKPPY-KGLLTHGFTVDGEGRK 633

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GN I P E+  ++G + +R ++      G+    D+  + KRV  +    I N +
Sbjct: 634 MSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISDE--ILKRV-VEGYRRIRNTL 690

Query: 363 SRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            R +   L DYD     +PT   + E D   +++   + +E+  +      H  +A++ +
Sbjct: 691 -RFLLANLTDYDHAKHALPTE-QWLEIDRYAVALTDSLQKEVLSHYDVYEFHPVVAKLQT 748

Query: 420 LVSE--VDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             SE     Y D  K   L  T PD      A   LY   + +        +F  + A +
Sbjct: 749 FCSEDLGGFYLDVLKD-RLYTTAPDSVARRSAQNALYHITQAMLHWMAPFLSFTAEEAWQ 807

Query: 473 IF 474
           +F
Sbjct: 808 VF 809



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  +K  +     Y N   HIGHA   I+ D++ +   L GLD ++  G D HG  I   
Sbjct: 54  KGAKKFILHDGPPYANGDLHIGHAVNKILKDMVIKARGLTGLDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
                 K      V  K       +  R  AD     VL    D ++    +   D  R 
Sbjct: 114 IEKQFGKGLPVKEVQEKARAYATGQIARQKADFERLGVLGDWADPYLTMNFRNEADEVRA 173

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 174 L-GKILEKGYVFRG 186


>gi|221483075|gb|EEE21399.1| valyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221504007|gb|EEE29684.1| valyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 1042

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +  G+ DN +  +A F+P  L   G DIL F    W A ++  +L L
Sbjct: 501 VLDTWFSSGLFPFSVFGWPDNTEDIQA-FFPTSLLETGHDILFF----WVARMVMMSLQL 555

Query: 287 PKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
             K     VF H  +    G+K+SKS GNVIDP+EVI  + +  L+
Sbjct: 556 TDKLPFDTVFLHAMVRDAHGQKMSKSKGNVIDPLEVISGISLQDLQ 601


>gi|15679505|ref|NP_276622.1| leucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
          str. Delta H]
 gi|3122908|sp|O27552|SYL_METTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|2622626|gb|AAB85983.1| leucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
          str. Delta H]
          Length = 937

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          +REK++++ A  YP+   HIGH     + DV ARF R+ G +VLF       G  +   A
Sbjct: 23 DREKIFLTVAYPYPSGAMHIGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAPVIGIA 82

Query: 63 QN 64
          + 
Sbjct: 83 RR 84



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 27/233 (11%)

Query: 254 KFW-PADLHVIGKDI----LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           ++W P D  +  KD+    L FH  +  A    +  P    VF  G +  +G K+S S G
Sbjct: 558 RYWYPLDWRLSAKDLIGNHLTFHIFHHSAIFPESGWPRGAVVFGMGLL--EGNKMSSSKG 615

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---GLKKRVNADLANGIGNLVSRS 365
           NVI   + IE+ G D +R FL+      +D  + +    G ++R+      G        
Sbjct: 616 NVILLRDAIEKHGADVVRLFLMSSAEPWQDFDWRESEVIGTRRRIEWFREFG------ER 669

Query: 366 VSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-S 422
           VS IL     +     A  ES     ++   ++ ++E    +++    +A+ + + L+  
Sbjct: 670 VSGILDGRPVLSEVTPAEPESFIGRWMMGQLNQRIREATRALESFQTRKAVQEALYLLKK 729

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +VD Y        LK+        V  V   V+     L+  F+P  A ++++
Sbjct: 730 DVDHY--------LKRVEGRVDDEVKSVLANVLHAWIRLMAPFIPYTAEEMWE 774


>gi|163867548|ref|YP_001608747.1| isoleucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161017194|emb|CAK00752.1| Isoleucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 971

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPAD++  G D  R  F +    +    A  P  K V +HGF L   G+K+SKSLGN + 
Sbjct: 595 WPADVYFEGSDQHRGWFQSSLLESCGTRACSPY-KTVITHGFTLDENGKKMSKSLGNTVV 653

Query: 313 PIEVIEEVGVDALRYFLV 330
           P E+I+  G D  R +++
Sbjct: 654 PQEIIKTSGADIFRLWVM 671



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 65  YANGHIHIGHALNKVLKDVVVRSFQMRGFNANYVPGWDCHGLPI 108


>gi|160892244|ref|ZP_02073247.1| hypothetical protein BACUNI_04708 [Bacteroides uniformis ATCC 8492]
 gi|317480716|ref|ZP_07939802.1| valyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156858722|gb|EDO52153.1| hypothetical protein BACUNI_04708 [Bacteroides uniformis ATCC 8492]
 gi|316903057|gb|EFV24925.1| valyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 877

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 32/247 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  + V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-QNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D D L ++   +  N
Sbjct: 529 DKLGRKMSKSLGNSPDPLDLIEKYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFNN 586

Query: 357 GIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N        ++K ++    +P P A   +     +  + V  E+ +      +  AL
Sbjct: 587 KIWNAFR-----LIKGWEVSAEVPVPEASELAIRWFEAKQNEVAAEVADLFSKYRLSEAL 641

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P         V   T+     L  LL  F+P + 
Sbjct: 642 MAVYKL------FWDEFSSWYLEMIKPAYGQPINRKVYEATIGFFDNLLHLLHPFMPFIT 695

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 696 EELWQHL 702


>gi|150019400|ref|YP_001311654.1| leucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189082993|sp|A6M268|SYL_CLOB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149905865|gb|ABR36698.1| leucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 816

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 37/237 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P + I+E G D  R +L+      + G +  DG+K          +G  V R
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFGYTEGGAWSDDGIK---------SVGKFVDR 629

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCS----RVLQEIRENMQNQLIHRALAQVISL 420
            +  IL++   +I +  +  +S +S     +      ++ + E+      + A+A+++ L
Sbjct: 630 -IERILENCRNIINSNESTKDSIDSAEKELNFWKHNTIKGVTEDGDKMQFNTAIARLMEL 688

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +++Y          + N   A+ +    V+ I+    LL  F P  A + + +L
Sbjct: 689 TNALNKY---------TQENIKNANFLKETIVDFIK----LLAPFAPHFAEEQWSLL 732


>gi|323141827|ref|ZP_08076692.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413698|gb|EFY04552.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 929

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ ++++        P+ S    WP  +++ G D  R  F +    +  ++   
Sbjct: 533 IMDVWFDSGSSHMAVAA--KRPELS----WPVAMYLEGSDQHRGWFQSSLLTSVAVAGRA 586

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  + V +HG+++   G K+SKS+GNVI P +VI++ G D +R +
Sbjct: 587 PY-ESVLTHGYVVDGDGRKMSKSVGNVIVPQDVIKQYGADIIRLW 630



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 17/156 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N + H+GHA   I+ D++ ++    G D  +  G D HG  I  AA  
Sbjct: 48  KKFVLHDGPPYANGKIHMGHALNKILKDIIMKYKYARGFDTPYVPGWDTHGMPIEHAAIK 107

Query: 65  AGVTTKVFVDQNS--RNFRDMA-DVLDISYDDFIRTTE---------KRHH----DTCRI 108
                +  +D  +  R   D A   +DI  +DF R              HH    +  R+
Sbjct: 108 ELGLNRNELDPLTLRRKCHDFALQWVDIQREDFKRLGVLGDWENPYITLHHSFEAEQIRV 167

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
               +++KG IYKG  + ++    E    + E+  G
Sbjct: 168 F-GTMANKGYIYKGKKTVYWCPHCETALAEAEIEYG 202


>gi|309781488|ref|ZP_07676224.1| isoleucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308919901|gb|EFP65562.1| isoleucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 959

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 25/242 (10%)

Query: 246 DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           D PDG  A     DL++ G D  R  FH+    A +L    P  K + +HGF +  +G K
Sbjct: 580 DLPDGRLA-----DLYLEGSDQHRGWFHSSLLTASMLYGKPPY-KGLLTHGFTVDGEGRK 633

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GN I P E+  ++G + +R ++      G+    D+  + KRV  +    I N +
Sbjct: 634 MSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISDE--ILKRV-VEGYRRIRNTL 690

Query: 363 SRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            R +   L DYD     +PT   + E D   +++   + +E+  +      H  +A++ +
Sbjct: 691 -RFLLANLTDYDHAKHALPTE-QWLEIDRYAVALTDSLQKEVLSHYDVYEFHPVVAKLQT 748

Query: 420 LVSE--VDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             SE     Y D  K   L  T PD      A   LY   + +        +F  + A +
Sbjct: 749 FCSEDLGGFYLDVLKD-RLYTTAPDSVARRSAQNALYHITQAMLHWMAPFLSFTAEEAWQ 807

Query: 473 IF 474
           +F
Sbjct: 808 VF 809



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  +K  +     Y N   HIGHA   I+ D++ +   L GLD ++  G D HG  I   
Sbjct: 54  KGAKKFILHDGPPYANGDLHIGHAVNKILKDMVIKARGLTGLDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
                 K      V  K       +  R  AD     VL    D ++    +   D  R 
Sbjct: 114 IEKQFGKGLPVKEVQEKARAYATGQIARQKADFERLGVLGDWADPYLTMNFRNEADEVRA 173

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 174 L-GKILEKGYVFRG 186


>gi|213691193|ref|YP_002321779.1| tRNA synthetase, valyl/leucyl, anticodon-binding [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|254783552|sp|B7GTW0|SYV_BIFLI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|213522654|gb|ACJ51401.1| tRNA synthetase, valyl/leucyl, anticodon-binding [Bifidobacterium
           longum subsp. infantis ATCC 15697]
 gi|320457252|dbj|BAJ67873.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 911

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + S+A F   +P DL   G+DI+R    +    A L +
Sbjct: 519 IMDTWATSSLTPQIVTHWAEPDEASQALFKSTFPMDLRPQGQDIIRTWLFSTVDRAHLEN 578

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+       G D
Sbjct: 579 KCLPWAHATLS-GWILDPDHK--KMSKSKGNVVVPNEPIEKFGADAVRYWAA-AARLGLD 634

Query: 339 GFYDKDGLK--KRVNADLANG 357
             YD   +K  +R+   L N 
Sbjct: 635 ATYDIGQMKIGRRLAIKLLNA 655



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+AR+ R+ G DV +  G D++G    +
Sbjct: 44  RDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTER 103

Query: 61  AAQN-AGVTTKVFVDQNSRNFR-----------DMADVLDISYDDFIRTTEK---RHHDT 105
             QN  GV   V +  +  +F+           D  D + IS  +FI   E+   +    
Sbjct: 104 RVQNYYGVRVDVSLPYDP-DFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKL 162

Query: 106 CRILWKKIS 114
              LW+K+ 
Sbjct: 163 FEALWRKLG 171


>gi|68171679|ref|ZP_00545039.1| isoleucyl-tRNA synthetase [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998893|gb|EAM85585.1| isoleucyl-tRNA synthetase [Ehrlichia chaffeensis str. Sapulpa]
          Length = 54

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 2/42 (4%)

Query: 287 PKKVF-SHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P K F SHGF L  KG K+SKSLGN +DP+EV+ + G D LR
Sbjct: 12  PFKAFLSHGFTLDGKGRKMSKSLGNTVDPLEVVNKYGSDILR 53


>gi|315446801|ref|YP_004079680.1| leucyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315265104|gb|ADU01846.1| leucyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 949

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 59  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAI 118

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 119 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 147


>gi|307293212|ref|ZP_07573058.1| isoleucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306881278|gb|EFN12494.1| isoleucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 974

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)

Query: 290 VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           V +HGF L  +G K+SKSLGNV+DP++VI E G D LR ++ 
Sbjct: 653 VLTHGFALDGQGRKMSKSLGNVVDPLKVIAESGSDILRVWVA 694



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K RE+  +     Y N   H+GHA   ++ D++ R   L G D  +  G D HG  I
Sbjct: 64  KGRERFILHDGPPYANGDIHMGHAMNKVLKDIIVRSQSLLGKDAPYVPGWDCHGLPI 120


>gi|172039150|ref|YP_001805651.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710934|sp|B1WSK6|SYL_CYAA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171700604|gb|ACB53585.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 853

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA
Sbjct: 31  DKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  +    +  +N    +     L +S  +D  + T    ++   + L+ +    G  Y
Sbjct: 91  IDRNIPPADWTYKNIAQMKQQLQTLGLSIDWDREVATCSPDYYKWTQWLFLQFYQAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLS 178
           +   +  +   D+    +++V    D + Y+ +    V+      +FF+++ Y ++LL+
Sbjct: 151 QKEAAVNWDPIDQTVLANEQV----DSEGYSWRSGAKVERKLLRQWFFKITDYAEQLLT 205


>gi|149370164|ref|ZP_01890015.1| putative valyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356655|gb|EDM45211.1| putative valyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 877

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 18/185 (9%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH 298
           L+NPD  +  ++ P +  V G DIL F    W A ++ A          K V+  G +  
Sbjct: 475 LNNPDNEEFNYYYPTNDLVTGPDILFF----WVARMVIAGYEYTDQRPFKNVYLTGLVRD 530

Query: 299 KGE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K   K+SKSLGN  D +++I++   D +R  L+     G D  +D+   ++        G
Sbjct: 531 KQRRKMSKSLGNSPDALKLIDDYSADGVRVGLLLSAPAGNDLMFDEALCQQ------GKG 584

Query: 358 IGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             N V  +  +    + D  IP P A   + E   S   + L EI ++     I  AL  
Sbjct: 585 FSNKVWNAFRLTQSWEQDASIPQPEASALAIEWYRSKLQQTLVEIEDHYSKYRISDALMG 644

Query: 417 VISLV 421
              L+
Sbjct: 645 TYKLI 649


>gi|147921580|ref|YP_684603.1| valyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|56295572|emb|CAH04814.1| tRNA synthetase Val [uncultured archaeon]
 gi|110619999|emb|CAJ35277.1| valyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 814

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 102/259 (39%), Gaps = 15/259 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           +M  W  +    L  + +   P+    + +P  L     DI+R    Y    ++L +  L
Sbjct: 456 VMDTWATSSITPLINSNW-GEPNSYIDQIYPMSLRPQAHDIIRTWLFYTVIKSYLHTGTL 514

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + S   +   G+ + KS GNVI+P+ VI +   DALR++           F +K+
Sbjct: 515 PWQNVMISGHGLDANGKAMHKSKGNVIEPLPVIAKYSADALRWWAASAKLGDDMPFKEKE 574

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRE 403
            +         N + N  SR  +M L+   G  P   A  E  D  ILS  + V++E  E
Sbjct: 575 IV---YGQKFLNKLWN-ASRFCAMHLQ---GFKPEAKAQLELIDHWILSKLNNVIRESTE 627

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +     +A   V         D Y +  K     K     AS    LY    V+    
Sbjct: 628 SFERYEYSKAKVAVEQFFWGDFCDNYLEMVKDRLYSKDEARAASRDAALYTLYTVLLDSL 687

Query: 460 ILLQAFVPKLANKIFDILF 478
            +L  F P +  +I+  LF
Sbjct: 688 KMLGPFTPHVTEEIYQCLF 706


>gi|302335824|ref|YP_003801031.1| Isoleucyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319664|gb|ADK68151.1| Isoleucyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 936

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 14/108 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           I+ VW D+  ++     +  N        +PAD+++ G D    H  ++ + L+++    
Sbjct: 547 ILDVWWDSGVSHTAVCKHRSNLQ------FPADMYLEGSDQ---HRGWFMSSLMTSVGAY 597

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +   K V S GF L  +G K+SKSLGNVIDP EV    G D LR ++
Sbjct: 598 GVAPYKSVVSQGFTLDGQGRKMSKSLGNVIDPNEVCATNGADVLRLWV 645



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 18/135 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   H+GHA   I  D++ R+  + G    +  G D HGQ I    + 
Sbjct: 50  DKFVLHDGPPYANGPIHLGHAQNKISKDIINRYWSMRGYQTPYVPGWDCHGQPIEHKVEE 109

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI 108
              T K F    +   R++   L +   D  R   KR                 +D   +
Sbjct: 110 MLGTAK-FNQLPTEKIRELCRKLAVEQVDTQRQGFKRLGVLGEWDDPYLTYVNDYDATDV 168

Query: 109 -LWKKISDKGDIYKG 122
            ++K I D+G IY+G
Sbjct: 169 EIFKAIFDRGSIYRG 183


>gi|296392678|ref|YP_003657562.1| leucyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296179825|gb|ADG96731.1| leucyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 942

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 13/128 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE  +I     YP+    H+GH    I  DV ARF R+ G +VL T G D  G      A
Sbjct: 47  REPFFIMDMFPYPSGDGLHVGHPLGFIATDVFARFQRMAGKNVLHTMGFDSFGLPTEIYA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G       D+N   F      + + +D+  R  T++  ++   + ++ KI       
Sbjct: 107 VQTGTHPAAVTDRNVERFLRQIRRIGLGHDERRRFKTSDPDYYRWTQWIFLKI------- 159

Query: 121 KGCYSGWY 128
              Y+ WY
Sbjct: 160 ---YNAWY 164


>gi|282879890|ref|ZP_06288617.1| valine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306284|gb|EFA98317.1| valine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 879

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 15/108 (13%)

Query: 245 LDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFI 296
           ++NPD  + +++   ADL + G DI+ F    W A ++ A       +P  + V+  G +
Sbjct: 474 INNPDNKEIQYYYPTADL-ITGPDIIFF----WVARMIMAGYEYKGQMPF-RHVYFTGIV 527

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
             K G K+SKSLGN  DPI +I++ G D +R  ++     G D  +D+
Sbjct: 528 RDKLGRKMSKSLGNSPDPIALIDKYGADGVRMGMMLSAPAGNDILFDE 575


>gi|242080701|ref|XP_002445119.1| hypothetical protein SORBIDRAFT_07g004420 [Sorghum bicolor]
 gi|241941469|gb|EES14614.1| hypothetical protein SORBIDRAFT_07g004420 [Sorghum bicolor]
          Length = 1056

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 18/163 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +    LT  G+  +    +A F+P  +   G DIL F    W A
Sbjct: 570 LRLDQDPD-VLDTWFSSGLFPLTVLGWPSDTADLRA-FYPTSVLETGLDILFF----WVA 623

Query: 278 FL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +      L  ++P  +KV+ H  I    G K+SKSLGNV+DP+EVI  + +D L   L 
Sbjct: 624 RMVMMGMQLGGDVPF-QKVYLHPMIRDAHGRKMSKSLGNVVDPLEVINGMSLDGLLKRLE 682

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  +    +DG KK    D  +GI    + ++   L  Y
Sbjct: 683 EGNLDPNELNIARDGKKK----DFPDGIAECGTDALRFALISY 721



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 146 HIGHALTVAIEDAMIRWRRMSGYNALWVPGVD-----------HAGIATQVVVEKKLMRE 194

Query: 81  RDMADVLDISYDDFI 95
           R +    DI  ++FI
Sbjct: 195 RKLTR-HDIGRENFI 208


>gi|254467798|ref|ZP_05081204.1| valyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086608|gb|EDZ63891.1| valyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 935

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 63/298 (21%)

Query: 234 ALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLL------SANL 284
           AL  + T    L+ P  S     K+ P+ + V G DI+ F    W A ++      +  +
Sbjct: 469 ALWPFSTLDWTLEYPSVSNPVIDKYLPSSVLVTGFDIIFF----WVARMVMLTKYVTGKI 524

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV----------------------- 320
           P  K V+ HG I   +G+K+SKS GNV+DPI++I+ +                       
Sbjct: 525 PF-KHVYVHGLIRDSEGQKMSKSKGNVLDPIDLIDGIDLDKLIDKRTYGLMNPKQKESIA 583

Query: 321 --------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
                         G DALR+      + G+D  +D +  +   N    N I N  SR V
Sbjct: 584 KRTKKEFPDGILAYGTDALRFTFASLASPGRDIKFDLNRCEGYRN--FCNKIWN-ASRFV 640

Query: 367 SMILKDYDGMIP--TPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            M   D D      T G   F+++D  I S+    L+ I  N +N     A  ++   + 
Sbjct: 641 LMNCPDDDNGFEQCTDGFMNFSQADRWITSIFQNTLKNIETNFENYRFDLAAQEMYQFIW 700

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVT-VEVIRQLAILLQAFVPKLANKIFDIL 477
           +   D Y +  K  +LK +N +        T + ++  +  ++   +P ++ +I+ I+
Sbjct: 701 DEYCDWYLEVAKV-QLKNSNSEATIRGTKRTLLGLLENILKMVHPLMPFISEEIWQII 757



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 13/77 (16%)

Query: 1  MKEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          + E +K   S  +  PN     H+GH +   + D L R+HR+ G + L+  GTD      
Sbjct: 31 LDEEKKDNFSILLPPPNVTGTLHMGHGFNQTLMDSLTRYHRMRGSNTLWQPGTD------ 84

Query: 59 AKAAQNAGVTTKVFVDQ 75
               +AG+ T++ V++
Sbjct: 85 -----HAGIATQIVVER 96


>gi|223939193|ref|ZP_03631075.1| leucyl-tRNA synthetase [bacterium Ellin514]
 gi|223892146|gb|EEF58625.1| leucyl-tRNA synthetase [bacterium Ellin514]
          Length = 909

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 138/351 (39%), Gaps = 90/351 (25%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--------PQYIMYV 230
           ++E+ PE  LP+    ++  F  +   +  L+R   DW + +PD         PQ+    
Sbjct: 500 HHEALPESALPV-VPPDLTDFKPTTSGEPPLARAK-DW-VNLPDGSIRETNTMPQWAGSC 556

Query: 231 W-----IDALTN----------YLTTTGY--LDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           W     IDA  +          Y   TG   + N  G+K      DL+V G +    H +
Sbjct: 557 WYYLRYIDARNDKTFCDSNAEHYWMGTGKSPIANVQGAKPPTPGVDLYVGGTEHAVLHLL 616

Query: 274 Y---WPAFLL---SANLPLPK-KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           Y   W   L      + P P  K+ + G IL + G+K+SKS GNV++P +V+ E G DA 
Sbjct: 617 YARFWHKVLFDLGQVSTPEPFFKLVNQGLILGEDGQKMSKSRGNVVNPDDVLGEYGADAF 676

Query: 326 RYF--------LVREIAC-GKDGFY--------------DKDGLKKRVNADLANGIGNLV 362
           R +        +V+     G +G Y               +   ++ +  +   G   L 
Sbjct: 677 RLYEMFMGPLEMVKPWNTKGVEGVYRFLGRVWRLFVDEQSETEFEQNLTTEGGKGAELLN 736

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +  +S  +KD             +  + L      ++++ E++ +   + A++ ++  V+
Sbjct: 737 AIKLSGAIKD-----------IAASPAQLKTLHATIKKVTEDLDHLRFNTAISALMVFVN 785

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           E          WE K              V V+R    LLQ F P LA ++
Sbjct: 786 EAIT-------WETKP-------------VSVLRDFLTLLQPFAPHLAEEL 816



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 9/127 (7%)

Query: 6   KLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K YI     YP+ A  H+GH       D+LAR+ R  G +VL   G D  G    + A  
Sbjct: 53  KYYILDMFPYPSGAGLHVGHPEGYTATDILARYRRAVGYNVLHPMGWDAFGLPAEQYAIK 112

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   +   + N   F+     L  SYD        R  DT    + K S    I+   Y
Sbjct: 113 TGQHPRKTTEANISTFKRQIKSLGFSYD------WSREVDTTDPKYFKWSQW--IFLKLY 164

Query: 125 SGWYSLR 131
           + W++L+
Sbjct: 165 NSWFNLK 171


>gi|149377498|ref|ZP_01895239.1| leucyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149358190|gb|EDM46671.1| leucyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 861

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 15/197 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++    L   YD    + T +  ++   +  + ++ +KG +YK
Sbjct: 92  ANKTAPAKWTHANIAYMKNQLKQLGFGYDWNRELATCKPDYYRWEQWFFARLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P QW      F R++ Y ++LL+
Sbjct: 152 KMSTVNWDPIDQTVLANEQVVDGRGWRSGALVEQKKIP-QW------FIRITDYAEELLN 204

Query: 179 ---YYESHPEFILPIER 192
                E  PE +  ++R
Sbjct: 205 DLDELEDWPEQVKTMQR 221


>gi|126438328|ref|YP_001074019.1| leucyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126238128|gb|ABO01529.1| leucyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 971

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 84  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAV 143

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 144 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 172


>gi|108802348|ref|YP_642545.1| leucyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119871501|ref|YP_941453.1| leucyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108772767|gb|ABG11489.1| leucyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119697590|gb|ABL94663.1| leucyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 971

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 84  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAV 143

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 144 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 172


>gi|257439124|ref|ZP_05614879.1| leucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198375|gb|EEU96659.1| leucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 848

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   +N  +FR+    L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKKNVDHFREQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           YK   +  +    +    ++EV  G   +  +   + V  QWM       +++AY DKL+
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHKVKSQWM------LKITAYADKLI 202



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKSLGNVI+P EV+++ G D +R +
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLY 650


>gi|189030337|sp|A3Q8Q1|SYL_MYCSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 950

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 63  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAV 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 123 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 151


>gi|298384033|ref|ZP_06993594.1| valine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298263637|gb|EFI06500.1| valine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 879

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 31/237 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  + I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFCSKIWNAFR---- 593

Query: 368 MILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            ++K +  D  I  P A   +     S  + V  E+ +      +  AL  V  L     
Sbjct: 594 -LIKGWTIDDNIQAPDAAKLAVHWFESKQNEVAAEVADLFSKYRLSEALMAVYKL----- 647

Query: 426 RYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++D    W L+   P        T    T+  +  L  LL  F+P +  +++  ++
Sbjct: 648 -FWDEFSSWYLEMIKPAYGQGIDRTTYSATLCFLDNLLHLLHPFMPFITEELWQQMY 703


>gi|291544322|emb|CBL17431.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Ruminococcus sp. 18P13]
          Length = 802

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  HIGH       D+++R  RL+G +VLF  G D  G      A
Sbjct: 31  KPKFYALVEFPYPSGQGLHIGHPRPYTAMDIVSRKRRLEGYNVLFPMGWDAFGLPTENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +   +    N  +F+     L +S+  D  I TT+  +    + ++ ++  KG  Y
Sbjct: 91  IKNKIHPAIVTKNNIAHFKAQLQSLGLSFDWDREINTTDPEYFKWTQWIFLQMFKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           K   S  +    +    ++EV  G   +      + V  QWM       +++ Y  +LL
Sbjct: 151 KKEMSVNWCTSCKVVLANEEVVGGVCERCGGEVIHKVKSQWM------LKITEYAQRLL 203



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 28/180 (15%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKIS 304
           +W P D +  G +    H +Y   W  FL     +S   P  ++  SHG IL + G+K+S
Sbjct: 524 YWMPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGAVSQKEPYMRRT-SHGMILGEDGQKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P EV+ + G D LR + +      K   +    ++         G    + R
Sbjct: 583 KSRGNVINPDEVVAQYGADTLRLYEMFIGDFEKTAPWSPSSIR---------GCKRFLDR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             ++     DG         E      ++  + ++++ E+++N   + A+A +++L++E+
Sbjct: 634 VWALQDMLTDG--------EEYRPETRALMHKTIKKVSEDIENLKFNTAIASMMALINEI 685


>gi|121595699|ref|YP_987595.1| isoleucyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607779|gb|ABM43519.1| Isoleucyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 951

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 44/319 (13%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP  +  I+R  E++   + G++  + SR T +  +   D   Y     I+ VW D+ 
Sbjct: 511 ELHPRTMEIIDRAAEIVE--QGGIE--AWSRVTAEEILGAEDAKHYTKSTDILEVWFDSG 566

Query: 236 TNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKK 289
           + +      T   + + +G +A     DL++ G D  R  FH+    A  +    P  + 
Sbjct: 567 STFWHVMRGTHPTMHHDEGPEA-----DLYLEGHDQHRGWFHSSLLLASAIFGRAPY-RG 620

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           + +HGF +  +G+K+SKSLGN + P EV  ++G + +R +      C    +     +  
Sbjct: 621 LLTHGFTVDGQGKKMSKSLGNTVSPQEVSGKLGAEIIRLW------CAATDYSGDLAIDD 674

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRE 403
           ++ A + +     +  ++  +L +     P   A       E D   LS  +++ Q+I  
Sbjct: 675 KILARVVDAY-RRIRNTLRFLLANVSDFDPAQDAVPFEQMLEIDRYALSRAAQLQQDILA 733

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-VTVEVI 455
           + +    H  +A++    SE     Y D  K   L  T P       A T LY +T  ++
Sbjct: 734 HYKVYEFHPVVAKLQLYCSEDLGGFYLDVLKD-RLYTTAPKSLARRSAQTALYQITHAML 792

Query: 456 RQLAILLQAFVPKLANKIF 474
           R +A  L +F  + A K+F
Sbjct: 793 RWMAPFL-SFTAEEAWKVF 810



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           Y N Q HIGHA   I+ D++ +  +L+G D ++  G D HG  I  A
Sbjct: 69  YANGQLHIGHAVNKILKDMIIKARQLEGFDAIYVPGWDCHGLPIENA 115


>gi|317181105|dbj|BAJ58891.1| isoleucyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 48/245 (19%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY+   + W+ L DE +  +D    G+         N ++ +E     F  S+ +++L +
Sbjct: 409 IYRAT-TQWFILMDEPFTQND----GSQKTLREVALNAIEKVE-----FVPSSGKNRLKT 458

Query: 179 YYESHPEFILP------------IERRNEVISFVKSGLKDLS--LSRKTFD--WGIKIPD 222
             E+ P++ L             I++R     F    L+  +    +K  D  W   + D
Sbjct: 459 MIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHAAHLFEKKGCDVWWEYSVKD 518

Query: 223 --DPQY------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              P Y            I+ VW D+ + +      L++  G K +  P+D+ + G D  
Sbjct: 519 LLPPSYQEDAMHYEKVMHILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQH 574

Query: 269 R--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +
Sbjct: 575 RGWFQSSLLIGCILNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVV 633

Query: 326 RYFLV 330
           R ++ 
Sbjct: 634 RLWVA 638


>gi|312888356|ref|ZP_07747932.1| leucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311299190|gb|EFQ76283.1| leucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 1098

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIFARYKRLKGFNVLHPMGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    +  + N   +R   D +  S+D
Sbjct: 90  IQTGQHPAITTEDNIATYRRQLDQIGFSFD 119


>gi|297813469|ref|XP_002874618.1| hypothetical protein ARALYDRAFT_489875 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320455|gb|EFH50877.1| hypothetical protein ARALYDRAFT_489875 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1190

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 95/230 (41%), Gaps = 13/230 (5%)

Query: 261 HVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV 316
           H + + + +    ++   +LS  L   P  K +  +G +L + G+K+SK L N   P+EV
Sbjct: 587 HFVAEGLDQTRGWFYTLMVLSTALFEKPAFKHLICNGLVLAEDGKKMSKKLRNYPPPLEV 646

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKD 372
           I+E G DA+R +L+       +    K     G+ K V     N    LV  +  +  + 
Sbjct: 647 IDEYGADAVRLYLINSPVVRAETLRFKKEGVLGVVKDVFLPWYNAYRFLVQNAKRLETEG 706

Query: 373 YDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               +PT  A  +S    D+ I S    +++ +R  M+   ++  +  ++  +  +   +
Sbjct: 707 GGPFVPTDLATLQSANVLDQWIHSATQSLVRTVRREMKKYQLYTVVPHLLKFLDSLTNVY 766

Query: 429 DAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  LK +T  D   T L     V+     ++  F P     ++  L
Sbjct: 767 VRFNRKRLKGRTGEDDCHTALSTLFNVLLTTCKVMAPFTPFFTETLYQNL 816


>gi|291546222|emb|CBL19330.1| leucyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 805

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 43/234 (18%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKIS 304
           K+ P D+++ G +    H +Y   +  FL     +  + P   K+F+ G I  K G K+S
Sbjct: 524 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAIDFDEPF-VKLFNQGMITGKNGIKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P +++ + G D+LR + +       D  +D  G+         +G+   + R
Sbjct: 583 KSKGNVISPDDLVNDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVSRFLKR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             ++ L   +  IP                ++ +++ R  M   +  R   +  SL + V
Sbjct: 634 FWNLALDSIEKDIPA---------------TKEMEKTRHKMVYDITSR--LEAFSLNTVV 676

Query: 425 DRYFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             + +   K   + K N D A     V  E I+ + ILL  FVP +A +I++ L
Sbjct: 677 SGFMEYTNKLIAIAKQN-DGA-----VDKETIKTVTILLAPFVPHIAEEIWEKL 724



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKMLQGYYLIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFR----DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV   V    N +N +    D+A + D  +D  + TT+   +   + ++ K+  +G
Sbjct: 89  AIKMGVHPAVSTAANIKNIKRQINDIAAIYD--WDMEVNTTDPEFYKWTQWIFVKMFKEG 146

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDK 175
             Y+  +   +    +    ++EV  G   +      + N  QWM       R++ Y D+
Sbjct: 147 LAYEKEFPINWCPSCKTGLANEEVVNGCCERCGTPVTKKNLRQWM------LRITKYADR 200

Query: 176 LLS 178
           LLS
Sbjct: 201 LLS 203


>gi|253569874|ref|ZP_04847283.1| valyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251840255|gb|EES68337.1| valyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 879

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 31/237 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+E+I++ G D +R  ++     G D  +D D L ++   +  + I N       
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD-DALCEQ-GRNFCSKIWNAFR---- 593

Query: 368 MILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            ++K +  D  I  P A   +     S  + V  E+ +      +  AL  V  L     
Sbjct: 594 -LIKGWTVDDNIQAPDAAKLAVHWFESKQNEVAAEVADLFSKYRLSEALMAVYKL----- 647

Query: 426 RYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++D    W L+   P        T    T+  +  L  LL  F+P +  +++  ++
Sbjct: 648 -FWDEFSSWYLEMIKPAYGQGIDRTTYSATLCFLDNLLHLLHPFMPFITEELWQQMY 703


>gi|189030338|sp|A1UPA5|SYL_MYCSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189030339|sp|Q1B0U5|SYL_MYCSS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 950

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 63  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAV 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 123 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 151


>gi|126658249|ref|ZP_01729399.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620398|gb|EAZ91117.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 853

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA
Sbjct: 31  DKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  +    +  +N    +     L +S  +D  + T    ++   + L+ +    G  Y
Sbjct: 91  IDRNIPPADWTYKNIAQMKQQLQTLGLSIDWDREVATCSPDYYKWTQWLFLQFYQAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLS 178
           +   +  +   D+    +++V    D + Y+ +    V+      +FF+++ Y ++LL+
Sbjct: 151 QKEAAVNWDPIDQTVLANEQV----DSEGYSWRSGAKVERKLLRQWFFKITDYAEQLLT 205


>gi|119494198|ref|ZP_01624670.1| leucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452132|gb|EAW33338.1| leucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 995

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 38/90 (42%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  QKPKFYTLAMFPYPSGNLHMGHVRVYTIIDVIARLKRMQGFRVLNPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +    +  QN    +   + L IS+D
Sbjct: 91  IERNIHPAKWTYQNIAQMKQQLERLGISFD 120


>gi|229820222|ref|YP_002881748.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566135|gb|ACQ79986.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 968

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EK Y+     YP+ +  H+GH    I  DV+ RF R+ G +VL     D  G    + A 
Sbjct: 60  EKFYVLDMFPYPSGKGLHVGHPLGYIATDVVGRFQRMQGRNVLHALAYDAFGLPAEQYAV 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   ++  +QN    R     L + +DD
Sbjct: 120 QTGQHPRITTEQNIATMRGQLRRLGLGHDD 149


>gi|15829138|ref|NP_326498.1| isoleucyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|81532810|sp|Q98PQ2|SYI_MYCPU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|14090082|emb|CAC13840.1| ISOLEUCYL-TRNA SYNTHETASE (ISOLEUCINE--TRNA LIGASE) (ILERS)
           [Mycoplasma pulmonis]
          Length = 888

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)

Query: 290 VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           + SHGF+L  KG+K+SK LGNV+DP E+I++ G D LR ++
Sbjct: 579 LLSHGFVLDGKGKKMSKQLGNVVDPQEIIQKYGADILRLWV 619



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K  ++  +     Y N   HIGHA   I+ D++ RF  L G    F  G D HG  I
Sbjct: 49  KNNKQFVVHDGPPYANGSIHIGHALNKILKDIVVRFKSLQGFYSPFVPGWDTHGLPI 105


>gi|332169813|gb|AEE19068.1| isoleucyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 1135

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 28/150 (18%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V S+G +L K G+K+SK LGN  DP E +E+ G DA R++++       +  +D +G+
Sbjct: 668 KNVVSNGLVLDKNGQKMSKRLGNATDPFETLEKYGPDATRWYMISNANPWDNLKFDLEGI 727

Query: 347 ---KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              K++    L N      + +   +  + D       AF E+             EI  
Sbjct: 728 EEVKRKFFGTLYN------TYNFFALYANLDNF-----AFAEA-------------EIEL 763

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           + + ++    L+++ SL++EVD+++   +P
Sbjct: 764 SQRPEIDRWILSELHSLIAEVDKFYAEYEP 793


>gi|188580913|ref|YP_001924358.1| leucyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179344411|gb|ACB79823.1| leucyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 875

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 27/177 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++             
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQG------------ 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R V  + +   G     G    +D ++     + L  + E+++    +R +A + +L
Sbjct: 691 -AARFVQRVWRLVHGATAANGPGGTADATLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +D                 R         E  R L  L+   +P LA + + +L
Sbjct: 750 ANALDEGL--------------RGGASAAAAGEAARILVQLIAPMMPHLAEECWRLL 792



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N    R     + +S D
Sbjct: 106 ERKVNPRDWTYANIATMRGQLQSMGLSLD 134


>gi|269123021|ref|YP_003305598.1| valyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314347|gb|ACZ00721.1| valyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 879

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 38/228 (16%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP--IERRNEVISFV 200
           K  + +YYN   N   W        R   +  ++ +YY  + E I+   IE   ++   V
Sbjct: 381 KRMEKRYYNWLENIRDWT-----ISRQIWWGHRIPAYYTPNNELIVAKNIEEAKKIC--V 433

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPA 258
           +   ++L L  +T             ++  W  +     +T G+   P+ ++   +++P 
Sbjct: 434 EKFGEELPLREET------------DVLDTWFSSALWPFSTMGW---PEKTRDLERYFPT 478

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANL----PLP-KKVFSHGFILHK-GEKISKSLGNVID 312
           DL V G DI+ F    W A ++  +L     +P K+V+  G I  + G K+SKSLGN  D
Sbjct: 479 DLLVTGDDIIFF----WVARMIMMSLHFLDTIPFKEVYFTGIIRDEIGRKMSKSLGNAPD 534

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            + ++++ G DA+R+  +   + G+D  + +  ++  +    AN I N
Sbjct: 535 TLAILDKYGSDAVRFSFMYNTSQGQDILFSEKLIE--MGHTFANKIWN 580



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 28/200 (14%)

Query: 2   KEREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---- 55
           K+ +K   +  I  PN     H+GH     I DV+ R+ R+ G D L+ TGTD  G    
Sbjct: 27  KDDKKPAYTIVIPPPNVTGVLHMGHVLNNTIQDVVIRYKRMKGYDTLWQTGTDHAGIATQ 86

Query: 56  ----QKIAKAA-QNAGVTTKVFVDQN-----------SRNFRDMADVLDISYDDFIRTTE 99
               +K+A++  +   +  + F+ +            ++  R + + +D   + F  T +
Sbjct: 87  NVVERKLAESNLRKEDLGREEFIKKVWEWKEKHGGIITKQQRRIGNSVDWERERF--TMD 144

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQ 158
           +   +  + ++  + ++G IYKG Y   +  R      DDE+ +   +G  +  ++ P++
Sbjct: 145 EGLSEAVKEVFVTLYNQGLIYKGEYMVNWCPRCTTALADDEINHIDKEGNIWEIKY-PLK 203

Query: 159 WMEEEGYFFRLSAYQDKLLS 178
             +EEGY    +   + +L 
Sbjct: 204 --DEEGYLIVATTRPETMLG 221


>gi|257076180|ref|ZP_05570541.1| isoleucyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 1009

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 22/199 (11%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V S  FIL   G+K+SKS GN +   + I   G D  R F            ++   +
Sbjct: 560 KNVMSMSFILDENGQKMSKSKGNFVTARDFISMYGADPARLFFYTGAP------WNSKSI 613

Query: 347 KKRVNADLANGIGNLVSRSVSMILK--DYDGMI-----PTPGAFTESDESILSVCSRVLQ 399
            K++  D A  +   +S   S      + DG +     P+       D  +LS  +  ++
Sbjct: 614 DKKLIGDTARKVFGTLSNVYSFFASNANLDGFVFQDLEPSSNLL---DRWLLSRLNSTIE 670

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRAS--TVLYVTVEV 454
             R+NM    +H AL  ++ L+++   Y+     ++ WE K  +  + +  T+ Y  + +
Sbjct: 671 NTRKNMDEFDMHIALRNIMDLINDFSNYYLRLSRKRFWEGKLDDEKKKAYETLYYTLINI 730

Query: 455 IRQLAILLQAFVPKLANKI 473
           ++ LA L   +   +  K+
Sbjct: 731 LKLLAPLAPFYTDYMYQKL 749


>gi|284030313|ref|YP_003380244.1| leucyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809606|gb|ADB31445.1| leucyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 828

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 18/197 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           E+ Y  T  +YP+   H+GH     + DVLARF    G DV+   G D  G     AA  
Sbjct: 45  ERRYALTMFSYPSGDLHMGHGEVFALHDVLARFWFQQGYDVMNPIGWDSFGLPAENAAIK 104

Query: 63  --QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             ++    T   ++  + + R  A  L   +   + T++  ++   + L+ +  ++G  Y
Sbjct: 105 RNEHPATYTYANIETQAESIRRYA--LSFDWSRRLHTSDPEYYRWTQWLFLRFFERGLAY 162

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQ--YYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K  Y  W    D+    +++V +G   +  +   +    QW      +F+ + Y  +LL
Sbjct: 163 RKASYVNWCP-NDQTVLANEQVVQGRCERCGFEVTKRELTQW------YFKTTEYAQRLL 215

Query: 178 SYYE--SHPEFILPIER 192
                   PE IL ++R
Sbjct: 216 DDMSLLEWPEEILLMQR 232



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 41/236 (17%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISK 305
           ++ PA  +V GK+    H +Y   F        LL+A  P   ++ + G ++++G+ +SK
Sbjct: 538 RWMPAYQYVGGKEHAVLHLLYARFFTKALHDMGLLNAVEPF-TRLLNQGQVINEGKAMSK 596

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL--VS 363
           SLGN ++  + ++E GVDA+R  +V   A   D   D         ADL+ G G+L  + 
Sbjct: 597 SLGNGVNLGDQLDEFGVDAIRLTMV--FAGPPDDDIDW--------ADLSPG-GSLRFLQ 645

Query: 364 RS--VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           R+  +S  ++   G  P  G     D ++  +  R + +  E +++   +  +A+V+ LV
Sbjct: 646 RAWRLSGSVEAPVGADPAAG-----DLALRKITHRTVADATELIESYRFNVMVARVMELV 700

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   +  D         + P  A   +   VE +   AILL    P  A  +++ L
Sbjct: 701 NATRKAID---------SGPGAADPAVREAVETV---AILLSLVAPYTAEDMWEQL 744


>gi|222111905|ref|YP_002554169.1| isoleucyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221731349|gb|ACM34169.1| isoleucyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 951

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 44/319 (13%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP  +  I+R  E++   + G++  + SR T +  +   D   Y     I+ VW D+ 
Sbjct: 511 ELHPRTMEIIDRAAEIVE--QGGIE--AWSRVTAEEILGAEDAKHYTKSTDILEVWFDSG 566

Query: 236 TNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKK 289
           + +      T   + + +G +A     DL++ G D  R  FH+    A  +    P  + 
Sbjct: 567 STFWHVMRGTHPTMHHDEGPEA-----DLYLEGHDQHRGWFHSSLLLASAIFGRAPY-RG 620

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           + +HGF +  +G+K+SKSLGN + P EV  ++G + +R +      C    +     +  
Sbjct: 621 LLTHGFTVDGQGKKMSKSLGNTVSPQEVSGKLGAEIIRLW------CAATDYSGDLAIDD 674

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRE 403
           ++ A + +     +  ++  +L +     P   A       E D   LS  +++ Q+I  
Sbjct: 675 KILARVVDAY-RRIRNTLRFLLANVSDFDPAQDAVPFEQMLEIDRYALSRAAQLQQDILA 733

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-VTVEVI 455
           + +    H  +A++    SE     Y D  K   L  T P       A T LY +T  ++
Sbjct: 734 HYKVYEFHPVVAKLQLYCSEDLGGFYLDVLKD-RLYTTAPKSLARRSAQTALYQITHAML 792

Query: 456 RQLAILLQAFVPKLANKIF 474
           R +A  L +F  + A K+F
Sbjct: 793 RWMAPFL-SFTAEEAWKVF 810



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           Y N Q HIGHA   I+ D++ +  +L+G D ++  G D HG  I  A
Sbjct: 69  YANGQLHIGHAVNKILKDMIIKARQLEGFDAIYVPGWDCHGLPIENA 115


>gi|195442760|ref|XP_002069114.1| GK24181 [Drosophila willistoni]
 gi|194165199|gb|EDW80100.1| GK24181 [Drosophila willistoni]
          Length = 938

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L S    N    K +F HGF +  KG K+SKSLGNVI P
Sbjct: 584 ADLYLEGYD--QFTGWFQSSLLTSIAARNTAPYKALFVHGFTVDEKGHKMSKSLGNVISP 641

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G D LR+++ 
Sbjct: 642 KQITKKYGTDVLRWWVA 658



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    +     Y N Q H+GHA   I+ D+  R     G  V +  G D HG  I   A
Sbjct: 73  EKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQKVNYIPGWDCHGLPIELKA 132

Query: 63  QNA----GVTTKVFVDQNSRNF 80
            NA      T  + + Q SR F
Sbjct: 133 TNATDRGSHTDPLDIRQKSRKF 154


>gi|315654876|ref|ZP_07907781.1| leucine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490837|gb|EFU80457.1| leucine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 973

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +REK +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 51  LAKREKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    +    N  N       + +S+D
Sbjct: 111 QYALQTGQHPAITTHDNIANMSKQLARIGLSHD 143


>gi|304389952|ref|ZP_07371909.1| leucine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326845|gb|EFL94086.1| leucine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 973

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +REK +I     YP+ +  H+GH    I  DV+AR+ R  G +VL+T G D  G    
Sbjct: 51  LAKREKYFILDMFPYPSGKGLHVGHPLGYIATDVVARYQRAQGKNVLYTMGYDAFGLPAE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    +    N  N       + +S+D
Sbjct: 111 QYALQTGQHPAITTHDNIANMSKQLARIGLSHD 143


>gi|296167086|ref|ZP_06849497.1| leucine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897576|gb|EFG77171.1| leucine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 993

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 92  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGHNVLHALGFDSFGLPAEQYAV 151

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 152 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 180


>gi|168008836|ref|XP_001757112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691610|gb|EDQ77971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1002

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++             K    PADL++ G D  R  F +    +       P
Sbjct: 555 MDVWFDSGSSWAAVVA------ARKELRSPADLYLEGSDQHRGWFQSSLLTSVATEGRAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
             K V +HGF+L  +G K+SKSLGNV+DP  VIE
Sbjct: 609 Y-KTVLTHGFVLDERGHKMSKSLGNVVDPRSVIE 641



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N + H+GHA   I+ D + R+  L G  V +  G D HG  I
Sbjct: 73  YANGELHMGHALNKILKDFINRYQLLQGRKVYYVPGWDCHGLPI 116


>gi|149028029|gb|EDL83480.1| rCG38382, isoform CRA_a [Rattus norvegicus]
          Length = 873

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 109/281 (38%), Gaps = 76/281 (27%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLG 308
           F+P  L   G DIL     +W A ++   L L +K+      LH       G K+SKSLG
Sbjct: 422 FYPGTLLETGHDIL----FFWVARMVMLGLKLTEKLPFREVYLHAIVRDAHGRKMSKSLG 477

Query: 309 NVIDPIEVIE-------------------------------------EVGVDALRYFLVR 331
           NVIDP++VI                                      E G DALR+ L  
Sbjct: 478 NVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLCA 537

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIG-----NLVSRSVSMILKDY-DGMIPTPGAFTE 385
             + G+D           +N D+   +G     N +  +    L+    G +P+P +  E
Sbjct: 538 YTSQGRD-----------INLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSKPE 586

Query: 386 SDESILS--VCSRVLQEIRENMQNQLIHRALAQVIS-----LVSEVDRYFDAQKPW--EL 436
             ES++   + SR+ + +R + +    +   A   +     L    D Y +  KP    +
Sbjct: 587 GHESLVDRWIRSRLAEAVRLSNEGFQAYDFPAVTTAQYSFWLYELCDVYLECLKPVLNGV 646

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D A   LY  ++V  +   LL  F+P +  ++F  L
Sbjct: 647 DQVAADCARQTLYTCLDVGLR---LLSPFMPFVTEELFQRL 684


>gi|121601879|ref|YP_989464.1| isoleucyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614056|gb|ABM44657.1| isoleucyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 971

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T +  +    D PD      WPAD++  G D  R  F +    +    A+ 
Sbjct: 572 ILDVWFDSGTTH--SFVLEDRPDLQ----WPADVYFEGSDQHRGWFQSSLLESCGTRAHS 625

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HGF L + G+K+SKSLGN + P ++++  G D  R +++
Sbjct: 626 PY-KAVVTHGFTLDEHGKKMSKSLGNTVVPQDLLKTSGADIFRLWVM 671



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           KER    +     Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 52  KERPCYILHDGPPYANGNIHIGHALNKVLKDVIIRSFQMRGFNANYVPGWDCHGLPI 108


>gi|317182627|dbj|BAJ60411.1| isoleucyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|302683102|ref|XP_003031232.1| hypothetical protein SCHCODRAFT_82414 [Schizophyllum commune H4-8]
 gi|300104924|gb|EFI96329.1| hypothetical protein SCHCODRAFT_82414 [Schizophyllum commune H4-8]
          Length = 1031

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 14/127 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLG 308
           F+P+ +   G DIL     +W A ++   L L      ++V+ H  I    G K+SKSLG
Sbjct: 580 FYPSSILETGWDIL----FFWVARMVMLGLKLTDQMPFREVYCHAMIRDAHGRKMSKSLG 635

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP++VI+   ++ L   L+      K+    K+G KK    D   GI    + ++  
Sbjct: 636 NVIDPLDVIQGCELEKLHAQLLEGNLDEKEIKKAKEGQKK----DFPKGIPQCGTDALRF 691

Query: 369 ILKDYDG 375
            L  Y G
Sbjct: 692 ALCAYSG 698


>gi|271502098|ref|YP_003335124.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345653|gb|ACZ78418.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 941

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 25/212 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     + VW D+ + + +         G  A     D+++ G D  R  F +    
Sbjct: 530 KVPD----TLDVWFDSGSTHASVVDVRPEFGGHAA-----DMYLEGSDQHRGWFMSSLMI 580

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           +  +    P  ++V +HGF +  +G K+SKS+GN + P +V++++G D LR ++      
Sbjct: 581 STAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLGADILRLWIGSTDYS 639

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS--- 392
           G+    D+  + KR +AD    I N    +   +L + +G  P   +    D  +L    
Sbjct: 640 GEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPALHSVKPEDMVVLDRWA 692

Query: 393 -VCSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
             C++  Q EI E  ++   HR + +++   S
Sbjct: 693 VGCAKAAQDEIVEAYESYDFHRVVQRLMQFCS 724


>gi|254820299|ref|ZP_05225300.1| leucyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 969

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGLGHD 157


>gi|228472344|ref|ZP_04057110.1| leucine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276547|gb|EEK15271.1| leucine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 945

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D++AR+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIVARYKRHKGFNVLHPQGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    V   QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPAVTTAQNIARYREQLDKIGFSFD 119



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 41/181 (22%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P ++ E+ G D LR +         + F       K  N    +G+ N
Sbjct: 719 EKMSKSKYNVVNPDDICEQYGADTLRLY---------EMFLGPLEQAKPWNTAGISGVYN 769

Query: 361 LVSRSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + +   +   D    +    PTP         +L    + ++++ E+++N   + +++Q
Sbjct: 770 FLRKLWRLYFNDNGWQVTDEAPTP--------EMLKALHKTIKKVNEDIENFSFNTSVSQ 821

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  V+E+           LK  + D           V+  LA+L+  F P +A +++  
Sbjct: 822 FMICVNELS---------SLKCHHRD-----------VLAPLAVLVAPFAPHIAEELWKR 861

Query: 477 L 477
           L
Sbjct: 862 L 862


>gi|224115854|ref|XP_002317141.1| predicted protein [Populus trichocarpa]
 gi|222860206|gb|EEE97753.1| predicted protein [Populus trichocarpa]
          Length = 974

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH       D+LAR  R+ G +VL   G D  G    + A
Sbjct: 114 KPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYA 173

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K+   +N   F  +    L +SY  D  I TTE +++   + ++ ++  +G  
Sbjct: 174 IETGTHPKITTLRNINRFLSLQLKSLGLSYDWDREISTTEPQYYKWTQWIFLQLLKRGLA 233

Query: 120 YKG 122
           Y+ 
Sbjct: 234 YQA 236


>gi|221195817|ref|ZP_03568870.1| isoleucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184291|gb|EEE16685.1| isoleucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 937

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           PAD+++ G D    H  ++ + L+++    ++   K V S GF L  +G K+SKSLGNVI
Sbjct: 572 PADMYLEGSDQ---HRGWFMSSLMTSVGAYDMAPYKAVVSQGFTLDGQGRKMSKSLGNVI 628

Query: 312 DPIEVIEEVGVDALRYFLV 330
           DP +V  E G D LR ++ 
Sbjct: 629 DPNKVCAERGADVLRLWVA 647



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 20/136 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           EK  +     Y N   H+GHA   I  D++ R+  + G    +  G D HGQ I    + 
Sbjct: 50  EKFVLHDGPPYANGPIHLGHAQNKISKDIINRYKAMRGFQTPYIPGWDCHGQPIEHKVEE 109

Query: 64  -------NAGVTTKVF----------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                  NA  T K+           VD   + F+ +  VL   +DD   T    +  T 
Sbjct: 110 MLGTEKFNALPTEKIRELCRKMAVEQVDTQRQGFKRLG-VL-AKWDDPYLTYTPDYDATD 167

Query: 107 RILWKKISDKGDIYKG 122
             ++K I DKG +Y+G
Sbjct: 168 IEIFKAIFDKGAVYRG 183


>gi|302760033|ref|XP_002963439.1| hypothetical protein SELMODRAFT_141956 [Selaginella moellendorffii]
 gi|300168707|gb|EFJ35310.1| hypothetical protein SELMODRAFT_141956 [Selaginella moellendorffii]
          Length = 960

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 16/117 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           I    DP  ++  W  +     +  G+   P+ +K    F+P  L   G DIL F    W
Sbjct: 475 ISFEQDPD-VLDTWFSSGLFPFSVLGW---PEATKDLQAFYPTTLLETGHDILFF----W 526

Query: 276 PAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
            A ++   + L      K++F H  +    G K+SKSLGNVIDP++VI  + +D L+
Sbjct: 527 VARMVMMGIQLTGEVPFKQIFLHAMVRDAHGRKMSKSLGNVIDPLDVIHGITLDGLK 583



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 15/108 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    + D L R+ R+ G + L+  G D           +AG++T+V V++     
Sbjct: 49  HIGHALMCAVEDTLTRWRRMKGYETLWVPGVD-----------HAGISTQVVVEKKIMRE 97

Query: 81  RDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +    D+  +DF++   + +++H  +     +K+    D  + C++
Sbjct: 98  KGLTR-HDVGREDFVKEVWSWKEQHGTSIFSQLRKMGASVDWSRECFT 144


>gi|237786627|ref|YP_002907332.1| leucyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759539|gb|ACR18789.1| Leucyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 1040

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++++     YP+    H+GH    I  DV ARFHR+ G +VL T G D +G    + A 
Sbjct: 94  DRIFVQDMFPYPSGVGLHVGHPLGYIATDVYARFHRMLGKNVLHTLGYDAYGLPAEQYAV 153

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  N +     L + +D
Sbjct: 154 QTGTHPRTTTEANIANMKRQLGRLGLGHD 182


>gi|126724364|ref|ZP_01740207.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126705528|gb|EBA04618.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 865

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 10/180 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 51  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKMSTGHNVLHPMGWDAFGMPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N    +D    L +S D   +F  T +  ++   + L+  +  K  +
Sbjct: 111 MAIGGHPKEWTYNNIAVMKDQMKPLGLSIDWSREFA-TCDPEYYGQQQALFIDMLAKELV 169

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y K     W  +      N+  +    DG+ + +   PV+  E   +FF++S    +LLS
Sbjct: 170 YRKNAVVNWDPVDMTVLANEQVI----DGKGWRSD-APVERRELTQWFFKISDMSGELLS 224



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 60/210 (28%)

Query: 286 LPKKVFSHGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVRE----- 332
           LP+ V S G +   GE        K+SKS  NV+DPI +IE  G D  R+F++ +     
Sbjct: 615 LPEDV-SDGKVTATGETLEIIPSAKMSKSKKNVVDPISIIESYGADTARWFVLSDSPPER 673

Query: 333 ----IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                A G +  +       R++ ++A G             KD           T SD+
Sbjct: 674 DVEWTAAGAEATFKHLSRVLRISTEIAEG-------------KD-----------TGSDD 709

Query: 389 SILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             L+ +  R + ++   +++   + ++A++    + + +          K T   RA   
Sbjct: 710 LALARLTHRAVHDVTMGVESFGFNASIAKLYGFTNALAKS---------KATAAARA--- 757

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                E +R LA L+    P LA +I+ +L
Sbjct: 758 -----ESMRTLAQLMAPITPHLAEEIWSML 782


>gi|302776862|ref|XP_002971572.1| hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]
 gi|300160704|gb|EFJ27321.1| hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]
          Length = 960

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 16/117 (13%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYW 275
           I    DP  ++  W  +     +  G+   P+ +K    F+P  L   G DIL F    W
Sbjct: 475 ISFEQDPD-VLDTWFSSGLFPFSVLGW---PEATKDLQAFYPTTLLETGHDILFF----W 526

Query: 276 PAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
            A ++   + L      K++F H  +    G K+SKSLGNVIDP++VI  + +D L+
Sbjct: 527 VARMVMMGIQLTGEVPFKQIFLHAMVRDAHGRKMSKSLGNVIDPLDVIHGITLDGLK 583



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 15/108 (13%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    + D L R+ R+ G + L+  G D           +AG++T+V V++     
Sbjct: 49  HIGHALMCAVEDTLTRWRRMKGYETLWVPGVD-----------HAGISTQVVVEKKIMRE 97

Query: 81  RDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +    D+  +DF++   + +++H  +     +K+    D  + C++
Sbjct: 98  KGLTR-HDVGREDFVKEVWSWKEQHGTSIFSQLRKMGASVDWSRECFT 144


>gi|195376029|ref|XP_002046799.1| GJ12288 [Drosophila virilis]
 gi|194153957|gb|EDW69141.1| GJ12288 [Drosophila virilis]
          Length = 991

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 25/143 (17%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           +K G K+L L+R           DP  ++  W  +     +  G+   PD S  + +P +
Sbjct: 505 LKLGSKELRLTR-----------DPD-VLDTWFSSSLLPFSVAGW---PDESYKEKYPLN 549

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDP 313
           L   G DIL F    W A ++   L L  K     +  +G +   +G K+SKSLGN++ P
Sbjct: 550 LMQTGHDILFF----WVARMMMMGLKLTGKAPFDRILLNGIVCDAQGRKMSKSLGNIVTP 605

Query: 314 IEVIEEVGVDALRYFLVREIACG 336
            +V++   +D+L+  L +    G
Sbjct: 606 QQVVQGASLDSLKAALQQSCDSG 628


>gi|146281350|ref|YP_001171503.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166229760|sp|A4VI60|SYI_PSEU5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145569555|gb|ABP78661.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 943

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 230 VWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T +   +  +  + +  G +A     DL++ G D  R  FH+       +  + 
Sbjct: 536 VWFDSGTTHWHVMRGSHPMGHEQGPRA-----DLYLEGSDQHRGWFHSSLLTGAAIDGHA 590

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF +   G K+SKSLGNVI P E+ + +G D LR ++
Sbjct: 591 PY-KGLLTHGFTVDENGRKMSKSLGNVIAPQEITDSMGADILRLWV 635



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   +I D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFILHDGPPYANGNIHIGHAVNKVIKDMIVRSRTLAGFDAPYVPGWDCHGLPI 102


>gi|110596870|ref|ZP_01385160.1| isoleucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341557|gb|EAT60017.1| isoleucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 1085

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ +       Y   P  ++ +F   +PAD    G D  R  F+ ++  A L+  + 
Sbjct: 551 VWFDSGSMPFAQLHY---PFENREQFDRTFPADFIAEGVDQTRGWFYTLHAIATLI-FDK 606

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + +  +G IL K G+K+SKS GNV+DP E +   G DALR++L+
Sbjct: 607 PAYRNLIVNGHILDKNGQKMSKSKGNVVDPFETMGRYGADALRWYLM 653


>gi|16330137|ref|NP_440865.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501011|sp|P73505|SYI_SYNY3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1652625|dbj|BAA17545.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 988

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 30/193 (15%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       + P       +P D+++ G D  R  F +    +  ++   P
Sbjct: 540 MDVWFDSGSSWAAVANAKNRPLK-----YPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAP 594

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K V +HGF+L  KG K+SKSLGNV+DP ++I            G D LR + V  +  
Sbjct: 595 Y-KTVLTHGFVLDEKGHKMSKSLGNVVDPYQIINGGKNQKQEPAYGADVLRLW-VASVDY 652

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESI 390
             D    +  LK+ V+      I N +  +   +L +     P   A       E D  +
Sbjct: 653 ANDVPIGQGILKQLVD------IRNKIRNTARFLLGNLHDFNPETDAVAYEDLPELDRYM 706

Query: 391 LSVCSRVLQEIRE 403
           L   + V  E+ E
Sbjct: 707 LHRMTEVFTEVTE 719


>gi|313888501|ref|ZP_07822168.1| leucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845530|gb|EFR32924.1| leucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 803

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 46/233 (19%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILH-KGEKIS 304
           ++W P D +  G +    H +Y   W  FL    +   K+ +    SHG IL    EK+S
Sbjct: 524 EYWTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYQKRTSHGMILGGNNEKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +++ + G D LR + +      K   + ++G+K         G    + R
Sbjct: 584 KSRGNVVNPDDIVRDYGADTLRCYEMFIGDFEKPVPWSENGVK---------GCRRFLER 634

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             ++     DG         E  + +++   + ++++ E+  N   + A+AQ+++L +E 
Sbjct: 635 VWNLQEIVVDG--------DEYSKELVTEIHKTIKKVTEDYANLKANTAIAQLMTLSNEF 686

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                               S +  +T E  R   ILL    P +  +++++ 
Sbjct: 687 --------------------SDLGKITKEDFRTFLILLNPVAPHITEELWEVC 719



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G      
Sbjct: 30  DKEKFYALVEFPYPSGQGLHVGHPRPYTALDIVSRMKRMQGYNVLYPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +F+     +  S+D    I TT+  ++   + ++ ++  KG  
Sbjct: 90  AIKNKIHPALVTKNNIAHFKKQLKSIGFSFDWSREINTTDPEYYKWTQWIFLQLYKKGLA 149

Query: 120 YK 121
           YK
Sbjct: 150 YK 151


>gi|307543943|ref|YP_003896422.1| valyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307215967|emb|CBV41237.1| valyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 948

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 50/286 (17%)

Query: 235 LTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVF 291
            ++ L T G L  P+ ++A   F P+ + V G DI+ F         L     +P K+V+
Sbjct: 475 FSSGLWTFGTLGWPEKTEALETFHPSSVLVTGFDIIFFWVARMIMLTLEFTGEVPFKQVY 534

Query: 292 SHGFILH-KGEKISKSLGNVIDPIEVIEEV------------------------------ 320
            HG +   +G K+SKS GNV+DPI++I+ +                              
Sbjct: 535 VHGLVRDGQGNKMSKSKGNVLDPIDLIDGIDLESLVEKRTGNMMQPQKAKAIAKATRQEF 594

Query: 321 -------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+  + +   G+D  +D   L    N    N + N  SR V M  +  
Sbjct: 595 PEGIEPHGTDALRFTFLSQATTGRDIKFDMGRLDGYRN--FCNKLWN-ASRYVLMNAEGQ 651

Query: 374 D-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
           D G   +    + +D  I+S   +   ++   M+      A   +   +     D Y + 
Sbjct: 652 DCGADGSEVELSLADRWIISRLQQTEAQVTRAMEEYRFDHASQALYEFIWNEYCDWYLEL 711

Query: 431 QKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            KP  W+   T P+         V V+  +  L    +P ++ +I+
Sbjct: 712 SKPVLWDDDAT-PESQRGTRRTLVRVLEAILRLAHPMMPYISEEIW 756



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 25/136 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIA 59
           S  I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G        +K+A
Sbjct: 34  SIMIPPPNVTGSLHMGHAFQDTIMDTLTRWRRMQGRNTLWQVGTDHAGIATQMLVERKVA 93

Query: 60  --KAAQNAGVTTKVFVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +      +  + F D+            +R  R M   +D S + F  T +   +   
Sbjct: 94  AEEGKSRHDLGREAFTDKIWEWKHESGGHITRQLRRMGASVDWSRERF--TMDDGFYKAV 151

Query: 107 RILWKKISDKGDIYKG 122
           + ++ ++ DKG IY+G
Sbjct: 152 QEVFVQLFDKGLIYRG 167


>gi|255013125|ref|ZP_05285251.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 946

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ +RF RL G +VL   G D +G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++    N   +R+  + +   YD
Sbjct: 90  IQTGQHPEITTKNNIARYREQLEKIGFCYD 119


>gi|255021603|ref|ZP_05293646.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968991|gb|EET26510.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 937

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +       P  + V +HGF +  +G K+SKSLGNVI P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLLESVASRGRAPY-RAVLTHGFTVDAEGRKMSKSLGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLVRE 332
            ++I+  G D LR ++  E
Sbjct: 617 QQIIDRYGADILRLWVASE 635


>gi|218675402|ref|ZP_03525071.1| methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 501

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 129/351 (36%), Gaps = 70/351 (19%)

Query: 29  IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           ++ADV  R+HR+ G      TG DEHG      A+  G         +          +D
Sbjct: 3   LLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKARKLGRPVDDVAHMHIEEILQCLRSVD 62

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           I  D F+RT+ + H D    ++ ++           SG+  LRD      +++Y G   +
Sbjct: 63  IEPDVFVRTSSEDHKDRSLAIYDQLR---------ASGYVELRD-----GEQLYCGTCEE 108

Query: 149 Y------------------------------YNAQHNPVQWMEEEGYF--------FRLS 170
           +                              +N   NP+     +           F+L 
Sbjct: 109 FAADSLAVGECPACNAPTDSNLCEDCGSALQHNLLRNPIHTTCGQSLILRPIRQVHFQLE 168

Query: 171 AYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI- 227
            +   L    E+   PE I    +R E + +++S L  L +SR  FD G+ + + P  + 
Sbjct: 169 KFAPGLDHAIEASGWPESI----KRKE-LDWLRSKLMALPMSRH-FDRGVTL-NSPVEVA 221

Query: 228 ---MYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVI---GKDILRFHAIYWPAFL 279
              +  W + L  Y T    L   +G+        A   ++   G+D   ++ I   A L
Sbjct: 222 GQTLMTWFEGLWCYETGIERLCKQNGADLDDTMRNASTRLVFFMGQDNRFYYTIGVTASL 281

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            S    +P       F   +G K S S  + +   EV  ++  + LRY+L 
Sbjct: 282 FSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWADEVAADIDTNVLRYYLA 332


>gi|187929796|ref|YP_001900283.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|254782429|sp|B2UAQ4|SYI_RALPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187726686|gb|ACD27851.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 959

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 25/242 (10%)

Query: 246 DNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           D PDG  A     DL++ G D  R  FH+    A +L    P  K + +HGF +  +G K
Sbjct: 580 DLPDGRLA-----DLYLEGSDQHRGWFHSSLLTASMLYGKPPY-KGLLTHGFTVDGEGRK 633

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GN I P E+  ++G + +R ++      G+    D+  + KRV  +    I N +
Sbjct: 634 MSKSIGNTIAPQEIANKMGAEIIRLWVASTDYSGELAISDE--ILKRV-VEGYRRIRNTL 690

Query: 363 SRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            R +   L DYD     +PT   + E D   +++   + +E+  +      H  +A++ +
Sbjct: 691 -RFLLANLTDYDHAKHALPTE-QWLEIDRYAVALTDALQKEVLSHYDVYEFHPVVAKLQT 748

Query: 420 LVSE--VDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             SE     Y D  K   L  T PD      A   LY   + +        +F  + A +
Sbjct: 749 FCSEDLGGFYLDVLKD-RLYTTAPDSVARRSAQNALYHITQAMLHWMAPFLSFTAEEAWQ 807

Query: 473 IF 474
           +F
Sbjct: 808 VF 809



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  +K  +     Y N   HIGHA   I+ D++ +   L GLD ++  G D HG  I   
Sbjct: 54  KGAKKFILHDGPPYANGDLHIGHAVNKILKDMVIKARGLTGLDAVYVPGWDCHGMPIEIQ 113

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
                 K      V  K       +  R  AD     VL    D ++    +   D  R 
Sbjct: 114 IEKQFGKGLPVKEVQEKARAYATGQIARQKADFERLGVLGDWADPYLTMNFRNEADEVRA 173

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 174 L-GKILEKGYVFRG 186


>gi|152980718|ref|YP_001354586.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166231615|sp|A6T239|SYL_JANMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151280795|gb|ABR89205.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 881

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 16/183 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA    
Sbjct: 41  FYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANN 100

Query: 67  VT----TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           V     T   +D        M   +D S +  +      ++   + ++ K+ +KG IYK 
Sbjct: 101 VPPAQWTYANIDYMKTQMASMGLAIDWSRE--MTACRPEYYKWNQWMFLKMLEKGIIYKK 158

Query: 123 CYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
             +  +   D+    +++V  G     G     +  P+       Y+ R++ Y ++LL +
Sbjct: 159 TGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPM-------YYARITDYAEELLDH 211

Query: 180 YES 182
            ++
Sbjct: 212 VDN 214


>gi|327479529|gb|AEA82839.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 943

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 230 VWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T +   +  +  + +  G +A     DL++ G D  R  FH+       +  + 
Sbjct: 536 VWFDSGTTHWHVMRGSHPMGHEQGPRA-----DLYLEGSDQHRGWFHSSLLTGAAIDGHA 590

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF +   G K+SKSLGNVI P E+ + +G D LR ++
Sbjct: 591 PY-KGLLTHGFTVDENGRKMSKSLGNVIAPQEITDSMGADILRLWV 635



 Score = 40.0 bits (92), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   +I D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFILHDGPPYANGNIHIGHAVNKVIKDMIVRSRTLAGFDAPYVPGWDCHGLPI 102


>gi|323451382|gb|EGB07259.1| hypothetical protein AURANDRAFT_64933 [Aureococcus anophagefferens]
          Length = 859

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 11/107 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           REK Y+     YP+    H+GH       D+++R+ R+ G DVL   G D  G    + A
Sbjct: 62  REKKYVLDMFPYPSGSGLHVGHPEGYTATDIMSRYWRMRGYDVLHPMGWDAFGLPAEQHA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD----------DFIRTTE 99
            N G   +     N   F+     L +SYD          D++R T+
Sbjct: 122 INTGTHPRETTLTNIGTFKRQLKSLGLSYDWDRELSTTDPDYVRWTQ 168



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS----HGFILHK-G 300
           D +   + P DL+V G +    H +Y   W   L        ++ F+     G IL   G
Sbjct: 574 DAADKSWLPVDLYVGGAEHAVLHLLYARFWHKVLYDIGATTHEEPFAKLVHQGLILGSDG 633

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYF 328
           EK+SKS GNV++P EVI E G DALR +
Sbjct: 634 EKMSKSRGNVVNPDEVIGEHGADALRLY 661


>gi|308062684|gb|ADO04572.1| isoleucyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|258614578|ref|ZP_05712348.1| methionyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 257

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 3/103 (2%)

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPK 468
           + ALA++  L+S  ++Y D  +PW L K    +A  ++V+    E +R  AILLQ  + +
Sbjct: 7   NTALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTE 66

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 67  TPEKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 109


>gi|160333671|ref|NP_780346.3| valyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
          Length = 1060

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 23/145 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D  G      A  A V
Sbjct: 140 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWIPGSDHAG-----IATQAMV 194

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG---DIYKGCY 124
             +++ +Q  R         ++S +DF+R   +  H+    +++++   G   D  + C+
Sbjct: 195 EKQLWKEQRVRRH-------ELSREDFLRAVWQWKHEKGGEIYEQLCALGASLDWDRECF 247

Query: 125 S---GWYSLRDEAY---YNDDEVYK 143
           +   G  +   EA+   YN   +Y+
Sbjct: 248 TMDAGSSAAVTEAFVRLYNSGLLYR 272



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSAN 283
           ++  W  +     +  G+  + PD   A F+P  L   G D+L F    +      L+  
Sbjct: 583 VLDTWFSSALFPFSALGWPRETPD--LAHFYPLTLLETGSDLLMFWVGRMVMLGTQLTGQ 640

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           LP   KV  H  +   +G K+SKSLGNV+DP ++I
Sbjct: 641 LPF-SKVLLHSMVRDRQGRKMSKSLGNVLDPRDII 674


>gi|149011480|ref|ZP_01832727.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764470|gb|EDK71401.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|57157203|dbj|BAD83631.1| valyl tRNA synthetase [Glugea plecoglossi]
          Length = 591

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 12/94 (12%)

Query: 245 LDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL 297
            D P  +K   K++PA +   G DIL F    W A ++  +L L      K +  HG + 
Sbjct: 444 FDWPKKTKDLKKYFPASILETGSDILFF----WVARMVMVSLELQNELPFKTILLHGIVR 499

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              G K+SKSLGNVIDP+ VIE + ++ L   L 
Sbjct: 500 DAHGRKMSKSLGNVIDPVHVIEGIDLEDLELSLT 533



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 12/75 (16%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
          HIGHA  + I D +AR+ R+ G +VLF  GTD  G      A    V  K+F ++    +
Sbjct: 3  HIGHAIMISIQDAIARYKRMRGFEVLFVPGTDHAG-----IATQTVVEKKLFAEEKKTRY 57

Query: 81 RDMADVLDISYDDFI 95
                 D+  D FI
Sbjct: 58 -------DLGRDQFI 65


>gi|110635538|ref|YP_675746.1| leucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|122965612|sp|Q11DE4|SYL_MESSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110286522|gb|ABG64581.1| leucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 871

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 20/176 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P ++ E  G D  R+F++ +    +D  +  DG         A G   
Sbjct: 628 EKMSKSKKNTVSPEDITESFGADTARWFMLSDSPPERDVEWTDDG---------AAGAHR 678

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVI 418
            V R+  +I +    +   TP A  + D + +S    + L+ + E+++    +RA+A++ 
Sbjct: 679 FVQRAWRLITEAAPAIGDITPKAARDGDAAAISKPAHKALKAVGEDIERLAFNRAIARIH 738

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            LV+++   F       L K + +  +     T  +I     L+  F+P LA + +
Sbjct: 739 ELVNDLQGPFAG-----LDKADEETRAAAREATEILIH----LIAPFMPHLAEECW 785



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 10/179 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPTYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGYNVLHPMGWDAFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI- 119
              +  K +   N    R    ++ +S D   +F  T +  ++   ++L+     KG + 
Sbjct: 93  QNKIHPKEWTYDNIATMRSQLKMMGLSLDWAREFA-TCDVDYYHRQQMLFIDFYKKGLVR 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            K     W  +      N+  +    DG+ + +    V+  E   +FF+++ Y + LLS
Sbjct: 152 RKTSKVNWDPVEQTVLANEQVI----DGRGWRSGAL-VEQRELAQWFFKITDYAEDLLS 205


>gi|315585808|gb|ADU40189.1| isoleucine--tRNA ligase [Helicobacter pylori 35A]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGKKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|301109357|ref|XP_002903759.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262096762|gb|EEY54814.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 957

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 16/125 (12%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           +P D+   G DIL F    W A +       S  +P  +KV  H  +  K G K+SKSLG
Sbjct: 488 YPLDIMETGSDILFF----WVARMAMLCEEFSGRVPF-EKVLLHPMVRDKAGRKMSKSLG 542

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP+ VI  + +D     L+ ++  G  G  +    +K +  +   GI    + ++  
Sbjct: 543 NVIDPLHVINGISLDQ----LLSDLQGGNVGSRELQKAEKELQKEFPKGIPTCGADALRF 598

Query: 369 ILKDY 373
            L  Y
Sbjct: 599 TLASY 603



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 21/125 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D +AR+HR+ G DV +  G D           +AG+ T+  V++     
Sbjct: 24  HIGHALTITIQDAIARWHRMRGFDVRWLPGLD-----------HAGIATQSVVERKLHKE 72

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           R ++   D+  + F+    + +      +  +I   G I K         +D+ Y+  DE
Sbjct: 73  RGLSR-YDLGREAFVDQVWQWNEQYGGKIMNQIDHLGAIVK---------KDQPYFTLDE 122

Query: 141 VYKGA 145
              GA
Sbjct: 123 QRSGA 127


>gi|254779935|ref|YP_003058042.1| isoleucyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001848|emb|CAX30096.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Helicobacter pylori B38]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G+K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGAKGQS-PSDVILEGSDQHRGWFQSSLLIGCVLNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVA 638


>gi|240849919|ref|YP_002971308.1| isoleucyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267042|gb|ACS50630.1| isoleucyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 971

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPAD++  G D  R  F +    +    A  P  K V +HGF L   G+K+SKSLGN + 
Sbjct: 595 WPADVYFEGSDQHRGWFQSSLLESCGTRACSPY-KAVITHGFTLDENGKKMSKSLGNTVV 653

Query: 313 PIEVIEEVGVDALRYFLV 330
           P E+I+  G D  R +++
Sbjct: 654 PQEIIKTSGADIFRLWVM 671



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 65  YANGHIHIGHALNKVLKDVVVRSFQMRGFNANYVPGWDCHGLPI 108


>gi|300775924|ref|ZP_07085784.1| leucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505474|gb|EFK36612.1| leucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 937

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 9/128 (7%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHQGFNVLHPVGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G    +  +QN   + +    +  S+D    + E R  D     W +      I+ 
Sbjct: 89  AIQTGQHPAITTEQNINRYEEQLRKIGFSFD---WSREVRTSDASYYKWTQW-----IFI 140

Query: 122 GCYSGWYS 129
             Y  WY+
Sbjct: 141 QLYHSWYN 148


>gi|225857275|ref|YP_002738786.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782445|sp|C1CLZ8|SYI_STRZP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225726249|gb|ACO22101.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|212703393|ref|ZP_03311521.1| hypothetical protein DESPIG_01436 [Desulfovibrio piger ATCC 29098]
 gi|212673138|gb|EEB33621.1| hypothetical protein DESPIG_01436 [Desulfovibrio piger ATCC 29098]
          Length = 939

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 16/109 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA-- 282
           I+ VW D+ T++         P+ S     PADL++ G D  R  FH+    + L++   
Sbjct: 536 ILDVWFDSGTSFAAVLE--TRPELSA----PADLYLEGSDQHRGWFHS----SLLVAEGT 585

Query: 283 -NLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            N P  K V +HG+++   G K+SKS+GNVI P E+I++ G + +R ++
Sbjct: 586 RNDPPYKAVLTHGYVVDGDGRKMSKSIGNVIAPQELIDKYGAEIVRLWV 634


>gi|118386473|ref|XP_001026355.1| leucyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89308122|gb|EAS06110.1| leucyl-tRNA synthetase family protein [Tetrahymena thermophila
          SB210]
          Length = 1041

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          ++K  ++    Y N + H+GH+Y M   D +AR+ RL+G +V+F  G    GQ I+ AA
Sbjct: 40 QKKYLVTFPYPYLNGRLHLGHSYTMTKVDFIARYKRLNGFNVVFPFGFHCTGQPISAAA 98



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 254 KFW-PADLHVIGKDILRFH---AIYWPAFLLSANLPL-PKKVFSHGFILHKGEKISKSLG 308
           ++W P DL    KD+++ H    I+  A +      + P+  F +G++L  GEK+SK  G
Sbjct: 629 RYWYPLDLRGSAKDLVKNHLTMCIFNHAAIWKDEPNMWPRSFFVNGYMLVDGEKMSKQKG 688

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           N     +++   G DA R+ L        D  ++K
Sbjct: 689 NFFTLKDIVSMYGADACRFALSEAGDTQDDANFEK 723


>gi|25029072|ref|NP_739126.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259505936|ref|ZP_05748838.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|23494359|dbj|BAC19326.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166417|gb|EEW50971.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 479

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 121/325 (37%), Gaps = 69/325 (21%)

Query: 14  AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           A P AQPHIGH    +  D+L R+    GLDV F     +   KI   A   G     +V
Sbjct: 51  ATPQAQPHIGHVRSGVAFDILRRWLLAKGLDVAFVRNVTDIDDKILTKAAEHGRPWWEWV 110

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR--HHDTCRILW-KKISDKGDIYKGCYSGWYSL 130
               R F    + L +       + E R   H T  + + +++ D G  Y+         
Sbjct: 111 STYEREFTWAYNTLGV----LPPSVEPRATGHVTQMVQYMQRLIDNGFAYE--------- 157

Query: 131 RDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            + + Y D   +  A+G  Y +   N V+ ME+                           
Sbjct: 158 VNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQ--------------------------- 190

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGY 244
                E  +F K G +D +L      W    P +P +    W +    +        T Y
Sbjct: 191 ----GETDNFGKRGPQDFAL------WKAAKPGEPSWPT-PWGEGRPGWHLECSAMATYY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L       A+F   D+H  G D+   H     A   +A     +    + ++   GEK+S
Sbjct: 240 LG------AEF---DIHCGGLDLQFPHHENEIAQAHAAGDGFARYWMHNHWVTMAGEKMS 290

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFL 329
           KSLGNV+    ++E+V    LRY+L
Sbjct: 291 KSLGNVLSVPNMLEKVRPVELRYYL 315


>gi|145221447|ref|YP_001132125.1| leucyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189030290|sp|A4T4R2|SYL_MYCGI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145213933|gb|ABP43337.1| leucyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 949

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 59  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAI 118

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 119 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 147


>gi|288576453|ref|ZP_06394405.1| valine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565488|gb|EFC87048.1| valine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 650

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    D  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETDELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+  G+D  +  + R     K
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLID--GIDLEKLLVKRTTGLRK 585



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVER 92


>gi|256838315|ref|ZP_05543825.1| leucyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256739234|gb|EEU52558.1| leucyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 946

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ +RF RL G +VL   G D +G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++    N   +R+  + +   YD
Sbjct: 90  IQTGQHPEITTKNNIARYREQLEKIGFCYD 119


>gi|255994248|ref|ZP_05427383.1| isoleucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993916|gb|EEU04005.1| isoleucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 1040

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +M  W D+ +       Y  +N +  K  F PA     G D  R  F+++   +  +   
Sbjct: 519 VMDCWFDSGSMPFAQFHYPFENEEKFKESF-PASFICEGIDQTRGWFYSLMAISTFIMGK 577

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V  +  IL K G+K+SKS GN +DP E+  + G D+LR++++          +D
Sbjct: 578 APY-KNVLVNDLILDKHGKKMSKSKGNTVDPFELFSKYGSDSLRWYMLYASPAWSPTKFD 636

Query: 343 KDGLKK 348
           ++GLK+
Sbjct: 637 EEGLKE 642


>gi|270308298|ref|YP_003330356.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270154190|gb|ACZ62028.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 1014

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 9/213 (4%)

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           N P  + V   G IL  +GEK+SKS  NVI P  V+++ G DA+R++       G    +
Sbjct: 608 NRPCYQNVICLGHILDERGEKMSKSRNNVIQPATVLDKYGADAVRWYFYTAAPPGNARRF 667

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRV 397
             + L   V       + N+ S  V+    + D   P+     G   E D  ILS  +++
Sbjct: 668 -SEKLVGEVTRQFLLMLWNVYSFFVT--YANIDSFTPSEKYLEGEVPELDRWILSELNQL 724

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIR 456
           + ++ + + N    +A  ++   V  +  ++  +      K+  D      Y  +   + 
Sbjct: 725 VLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSENDADKLSAYQALYTCLV 784

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            L+ LL  F P +A +++  L ++ +    +S+
Sbjct: 785 TLSRLLAPFTPFVAEELYQNLVLSADPSALESV 817


>gi|150009595|ref|YP_001304338.1| leucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166231625|sp|A6LGA2|SYL_PARD8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149938019|gb|ABR44716.1| leucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 946

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ +RF RL G +VL   G D +G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++    N   +R+  + +   YD
Sbjct: 90  IQTGQHPEITTKNNIARYREQLEKIGFCYD 119


>gi|148993770|ref|ZP_01823197.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147927726|gb|EDK78750.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|78184679|ref|YP_377114.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729939|sp|Q3AXV7|SYL_SYNS9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78168973|gb|ABB26070.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 884

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 36/78 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    +    + D
Sbjct: 70  YPSGSLHMGHVRNYVITDVIARVQRMRGDSVLHPMGWDAFGLPAENAAIERNIDPGEWTD 129

Query: 75  QNSRNFRDMADVLDISYD 92
           +N    R+  D L +S D
Sbjct: 130 RNIDQMRNQLDRLGLSID 147


>gi|289167475|ref|YP_003445744.1| isoleucyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907042|emb|CBJ21876.1| isoleucyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|262383119|ref|ZP_06076256.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295997|gb|EEY83928.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 946

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ +RF RL G +VL   G D +G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++    N   +R+  + +   YD
Sbjct: 90  IQTGQHPEITTKNNIARYREQLEKIGFCYD 119


>gi|221232397|ref|YP_002511550.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|298230124|ref|ZP_06963805.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298503404|ref|YP_003725344.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|254782443|sp|B8ZM55|SYI_STRPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|220674858|emb|CAR69433.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|298238999|gb|ADI70130.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|182684601|ref|YP_001836348.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303258589|ref|ZP_07344569.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262676|ref|ZP_07348616.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263616|ref|ZP_07349538.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266377|ref|ZP_07352266.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268250|ref|ZP_07354048.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|259511515|sp|B2IRR4|SYI_STRPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|182629935|gb|ACB90883.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802362|emb|CBW35116.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302636232|gb|EFL66727.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302640090|gb|EFL70545.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642201|gb|EFL72550.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644077|gb|EFL74335.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646654|gb|EFL76879.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|168488627|ref|ZP_02712826.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183572601|gb|EDT93129.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332072488|gb|EGI82971.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|326915110|ref|XP_003203864.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 18/136 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++  +     Y N  PH+GHA   I+ D+  RFH + G  V +  G D HG  I   
Sbjct: 20  KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYVPGWDCHGLPIELK 79

Query: 62  A----QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDT 105
           A    + A   + V + Q ++ F + A  ++     FIR            T + ++   
Sbjct: 80  ALSEIKGAENLSPVEIRQKAKEFAERA--IEKQKAAFIRWGIMADWANCYCTFDPKYEAN 137

Query: 106 CRILWKKISDKGDIYK 121
              ++ K+ DKG IY+
Sbjct: 138 QLRVFHKMYDKGFIYQ 153



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 22/118 (18%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q ++ +W D+ T++          +G++ +   AD+++ GKD L   F +    +     
Sbjct: 509 QDVLDIWFDSGTSWAHVL------EGTEQR---ADVYLEGKDQLGGWFQSSLLTSVATRK 559

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  K +  HGF L  KGEK+SKS+GNV+DP  VI            G D LR+++ 
Sbjct: 560 KAPY-KTLIVHGFTLGEKGEKMSKSIGNVVDPDVVINGGDDHTKDPPYGADVLRWWVA 616


>gi|325955471|ref|YP_004239131.1| Valyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438089|gb|ADX68553.1| Valyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 873

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLP-LPKKVFSH----GFILH 298
           ++NP   +  ++ P    V G DI+ F    W A ++ A    L +K F +    G +  
Sbjct: 474 INNPKNDEINYYYPTQDLVTGPDIIFF----WVARMIMAGYEYLDEKPFENVYFTGIVRD 529

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSLGN  DP+E+I E G DA R  ++     G D  +D +   +  N   AN 
Sbjct: 530 KLGRKMSKSLGNSPDPVELINEFGADATRMGMLLTAPAGNDLPFDVELCVQGRN--FANK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N   R +     D +    +  A   + +       + L +I  N +   +  AL  +
Sbjct: 588 IWNAF-RLIKGWEIDQNAQQSSTQA--TAVQWFAHRFQQALADIEHNYEQYRLSDALMTI 644

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             L+ +     Y +A KP      +P  A T  + T+  + ++  +L  F+P L  +++
Sbjct: 645 YKLIWDDFCSWYLEAIKP---NYGDPIDAKT-YHSTIGFLEEVLKVLHPFMPFLTEELW 699


>gi|291460834|ref|ZP_06600215.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380424|gb|EFE87942.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 398

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 16/118 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L+  +G      P DL++ G D  R  FH     +   + + P
Sbjct: 1   MDVWFDSGSSH---RGVLEVWEGLHR---PCDLYLEGSDQHRGWFHTSLLTSVSSTGDSP 54

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             K V +HGF+   +G K+SKSLGN + P +VI+  G D LR +      CG   + D
Sbjct: 55  Y-KSVLTHGFVNDGEGRKMSKSLGNTVAPSDVIKVYGADILRLW------CGSVDYRD 105


>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 910

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T++       ++        +PADL++ G D  R  F++    +  +S   
Sbjct: 524 IMDVWFDSGTSHQGCCAIREDLT------YPADLYLEGSDQYRGWFNSSLITSVAVSGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K++ S GF++   G K+SKSLGNVI P +V +E+G + +R
Sbjct: 578 PY-KELVSAGFVMDGNGNKMSKSLGNVISPNDVGKELGAEIIR 619



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +   N GV  K    
Sbjct: 59  YANGNIHIGHALNKILKDFIVKYKNMNGFVSPYVPGWDTHGLPIEQVLVNNGVDRKSMPA 118

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +  + D  +D+   T + +       ++ K+ DKG 
Sbjct: 119 NKFRNKCKDYALKQVDKQRADFKKLGVLGD--WDNPYLTLDPKFEAEQIRVFGKMVDKGY 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 177 IYKGLKPIYWSPSSESALAEAEI 199


>gi|300775296|ref|ZP_07085158.1| isoleucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506036|gb|EFK37172.1| isoleucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 1131

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 254 KFWPADLHVIGKDILR-----FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
           K +PAD    G D  R      HAI    F   A     K V S+G +L K G+K+SK L
Sbjct: 633 KAFPADFIAEGVDQTRGWFYTLHAIGTAVFDSVAY----KNVMSNGLVLDKNGQKMSKRL 688

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           GN +DP E +   G DA R++++      ++  +D +G+
Sbjct: 689 GNAVDPFETLAVYGPDATRWYMISNANPWENLKFDIEGI 727


>gi|163753383|ref|ZP_02160507.1| leucyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161327115|gb|EDP98440.1| leucyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 1000

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    Q 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHQGFNVLHPQGYDSFGLPAEQY 88

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
             +  Q+  +TTK     N   +R+  D +  S+D    + E R  D     W +     
Sbjct: 89  AIQTGQHPAITTKT----NIARYREQLDKIGFSFD---WSREVRTSDPAYYKWTQW---- 137

Query: 118 DIYKGCYSGWYSLR-DEAYYNDDEVYK 143
            I+   ++ WY++  D+A + D  V K
Sbjct: 138 -IFIELFNSWYNVETDKAEHIDTLVAK 163


>gi|118443863|ref|YP_877455.1| leucyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231600|sp|A0PYK3|SYL_CLONN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118134319|gb|ABK61363.1| leucyl-tRNA synthetase [Clostridium novyi NT]
          Length = 812

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 23/204 (11%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKK 289
           Y+DN +  KA       K  P D +V G +    H +Y   F+  A       N   P  
Sbjct: 499 YVDNNNSEKAFDIDKVNKMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFT 557

Query: 290 VFSH-GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +H G IL   G K+SKS GN I P + I+E G D  R +L+   A  + G +  D +K
Sbjct: 558 SLTHQGLILGPDGLKMSKSKGNTIAPDDYIKEYGADVFRMYLMFGFAYSEGGAWSDDAIK 617

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
               +   + +  +++ S + +    +    T     ++++ +       +Q + E+ + 
Sbjct: 618 SM--SKFVDKVERILADSRTQMADSKN----TKTTIEKAEKELNYTRHYAIQHVTEDTEK 671

Query: 408 QLIHRALAQVISLVSEVDRYFDAQ 431
              + A+A+++   + + +Y + +
Sbjct: 672 FQFNTAIARIMEYTNSLSKYLNEE 695



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+A + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSAAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             G+  +   D   +N  +M + L       ++D  I T    ++   + ++ K+ +KG 
Sbjct: 91  KTGIHPQ---DSTMKNIENMEEQLRSMGAMFNWDHEIITCLPDYYKWTQWVFLKLYEKGL 147

Query: 119 IYK 121
            Y+
Sbjct: 148 AYR 150


>gi|254230241|ref|ZP_04923632.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937221|gb|EDN56088.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 628

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 224 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 277

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  L
Sbjct: 278 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSDEI-L 336

Query: 347 KKRVNA 352
           K+  +A
Sbjct: 337 KRSADA 342


>gi|317178128|dbj|BAJ55917.1| isoleucyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|291543960|emb|CBL17069.1| Isoleucyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 929

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++   T  LD  D   A   P DL++ G D  R  F +    + +     
Sbjct: 533 IMDVWFDSGVSH---TAVLDEYDELYA---PCDLYLEGADQYRGWFQSSLLTSVVYKGCA 586

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V +HG+++  +G+ + KSLGN IDP E+ ++ G D LR ++ 
Sbjct: 587 PY-KNVCTHGWVVDGQGKTMHKSLGNGIDPSEITDKYGADILRLWVA 632


>gi|255322407|ref|ZP_05363553.1| isoleucyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300780|gb|EET80051.1| isoleucyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 918

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ VW D+ + +       D   GS    +PAD+++ G D  R    +  + LLS  A  
Sbjct: 537 ILDVWFDSGSTWAAVLKSGDYDAGS----YPADMYLEGSDQHR--GWFQSSLLLSCAAQG 590

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P + V +HGF +   G+K+SKS GNV+ P +V +  GV+ LR ++ 
Sbjct: 591 RAPYRSVLTHGFTVDENGQKMSKSKGNVVAPADVAKTYGVEILRLWVA 638



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 26/49 (53%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA    + D++A+ H   G +V FT G D HG  I +  +
Sbjct: 60  YANGNIHIGHALNKTLKDIIAKTHYFFGENVRFTPGWDCHGLPIEQQVE 108


>gi|237753253|ref|ZP_04583733.1| isoleucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375520|gb|EEO25611.1| isoleucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 928

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
            +I+ VW D+ +   T    L+N   +   + PA +++ G D  R  FH+    +  ++ 
Sbjct: 539 HHILDVWFDSGS---TWKAVLNNAKYTSGGY-PAQMYLEGSDQHRGWFHSSLLVSCAINE 594

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
             P  + + +HGF +   GEK+SKS GNVI P +V+++ G + LR ++ +
Sbjct: 595 CAPY-QSILTHGFTMDENGEKMSKSKGNVIPPEKVLKDFGSEILRLWVAQ 643



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ D++ + H   G  V +T G D HG  I +  +
Sbjct: 59  YANGHIHIGHALNKILKDMVVKHHYFQGKKVFYTPGWDCHGLPIEQQVE 107


>gi|262204627|ref|YP_003275835.1| leucyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262087974|gb|ACY23942.1| leucyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 951

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 9/125 (7%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I +DV AR+ R+ G +VL T G D  G    + A 
Sbjct: 60  DKLFVQDMFPYPSGAGLHVGHPLGFIASDVFARYQRMTGRNVLHTMGFDSFGLPAEQYAV 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G   +   + N   +      L + +D      E+R   T  + + + +    I+   
Sbjct: 120 QTGTHPRTTTEANIERYLAQIRQLGLGHD------ERRRVATTDVEFYRWTQW--IFLQI 171

Query: 124 YSGWY 128
           Y+ WY
Sbjct: 172 YNAWY 176


>gi|217034563|ref|ZP_03439972.1| hypothetical protein HP9810_874g20 [Helicobacter pylori 98-10]
 gi|216942983|gb|EEC22466.1| hypothetical protein HP9810_874g20 [Helicobacter pylori 98-10]
          Length = 920

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|154509233|ref|ZP_02044875.1| hypothetical protein ACTODO_01755 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798867|gb|EDN81287.1| hypothetical protein ACTODO_01755 [Actinomyces odontolyticus ATCC
           17982]
          Length = 976

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +      +I     YP+ +  H+GH    I  D LAR+ R+ G +VL+T G D  G    
Sbjct: 48  LASHNPFFILDMFPYPSGKGLHVGHPLGYIATDTLARYRRMKGDNVLYTMGYDAFGLPAE 107

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G    +  +QN  N R     + +S+D
Sbjct: 108 QYAVQTGQHPAITTNQNIANMRRQLRRMGLSHD 140


>gi|52548779|gb|AAU82628.1| isoleucyl-tRNA synthetase [uncultured archaeon GZfos18H11]
          Length = 1002

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL-- 346
           V S G IL  KG K+SKS GNV+D   ++++ G DALR++         D  + + G+  
Sbjct: 581 VLSLGHILDEKGVKMSKSKGNVVDITSMLDKEGADALRWYFYTAGPLSDDVRFTEKGIIE 640

Query: 347 -KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +K+    L N     V+ +V       +  IP        D  I+S  + + +E+ E++
Sbjct: 641 KQKKFLNTLWNSYFFFVTYAVIDEFNPNEKKIPVERR-NAMDRWIISRLNTLTKEVIESI 699

Query: 406 QNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQ 463
           +   IH A  ++   +V+++  ++  +          D      Y+T+ EV+  L  LL 
Sbjct: 700 ERFEIHVAARKMEEFIVNDLSNWYIRRSRRRFWIVEADFDKDSAYITLFEVLVSLCKLLA 759

Query: 464 AFVPKLANKIFDIL 477
            FVP +   I+  L
Sbjct: 760 PFVPFITEHIYQKL 773


>gi|86131042|ref|ZP_01049641.1| Isoleucyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818453|gb|EAQ39613.1| Isoleucyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 1151

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 28/150 (18%)

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K V S+G +L K G+K+SK LGN  DP E +E+ G DA R++++       +  +D +G+
Sbjct: 684 KNVVSNGLVLDKNGQKMSKRLGNATDPFETLEKYGPDATRWYMISNANPWDNLKFDLEGI 743

Query: 347 ---KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              K++    L N      + +   +  + D       AF E+             EI  
Sbjct: 744 EEVKRKFFGTLYN------TYNFFALYANLDNF-----AFAEA-------------EIEL 779

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           + + ++    L+++ SL++EVD+++   +P
Sbjct: 780 SQRPEIDRWILSELHSLIAEVDKFYAEYEP 809


>gi|157825706|ref|YP_001493426.1| leucyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166231638|sp|A8GNE3|SYL_RICAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157799664|gb|ABV74918.1| leucyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 870

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 38/88 (43%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLAMLPYPSGKIHLGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY 91
                 K +   N  N +     +  SY
Sbjct: 86  KNNSHPKDWTYSNIENMKKQLKSMGFSY 113


>gi|303389056|ref|XP_003072761.1| valyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301903|gb|ADM11401.1| valyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 924

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 20/129 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSL 307
           K++P+ L   G DIL F    W A ++   + L  K     VF HG +    G K+SKSL
Sbjct: 552 KYYPSTLLETGSDILFF----WVARMVMLGIELTGKEPFSQVFLHGIVRDAHGRKMSKSL 607

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR---VNADLANGIGNLVSR 364
           GNVIDPI VI+   +  L       I+  + G  D+  +K+    +  D  NGI    + 
Sbjct: 608 GNVIDPIFVIDGCPLSKL-------ISTMRSGNLDEREMKRAEEVLRKDFPNGIPRCGAD 660

Query: 365 SVSMILKDY 373
           ++   L  Y
Sbjct: 661 ALRFTLLSY 669



 Score = 40.4 bits (93), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +EK  I           HIGHA  + I D L R+ R+ G +VL+  GTD  G
Sbjct: 74  KEKYVIPIPPPNVTGNLHIGHAMMVSIQDTLCRYKRMCGYEVLYIPGTDHAG 125


>gi|149915697|ref|ZP_01904223.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810589|gb|EDM70432.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 860

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 10/179 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 37  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLSTGHNVLHPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N  + R     L +S D   +F  T +  ++   + L+  + +KG +
Sbjct: 97  MAIGGHPKDWTYSNIADMRSQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDMLEKGLV 155

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W  + D     +++V  G  G    A    V+  E   +FFR+S + + LL
Sbjct: 156 YRKNAVVNWDPV-DMTVLANEQVENG-RGWRSGAL---VERRELTQWFFRISDFAEDLL 209


>gi|134103793|ref|YP_001109454.1| leucyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005749|ref|ZP_06563722.1| leucyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|189083143|sp|A4FR54|SYL_SACEN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|133916416|emb|CAM06529.1| leucyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 955

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKL++     YP+    H+GH    I  DV ARF+R+ G +VL T G D  G    + A 
Sbjct: 57  EKLFVQDMFPYPSGSGLHVGHPLGFIGTDVYARFNRMLGKNVLHTMGFDSFGLPAEQYAV 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             G   +   ++N   +      L + +D+  R
Sbjct: 117 QTGTHPRTTTEKNIERYLTQIRRLGLGHDERRR 149


>gi|57530344|ref|NP_001006397.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Gallus gallus]
 gi|82233833|sp|Q5ZKA2|SYIM_CHICK RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
 gi|53131721|emb|CAG31841.1| hypothetical protein RCJMB04_12b19 [Gallus gallus]
          Length = 1000

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 30/142 (21%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K +++  +     Y N  PH+GHA   I+ D+  RFH + G  V +  G D HG  I   
Sbjct: 90  KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYVPGWDCHGLPIELK 149

Query: 59  ----AKAAQNAGVTTKVFVDQNSRNFRD---------------MADVLDISYDDFIRTTE 99
                K A+N    + V + Q ++ F +               MAD     + +  RT +
Sbjct: 150 ALSEVKGAEN---LSPVEIRQKAKEFAERAIEKQKAAFIRWGIMAD-----WANCYRTFD 201

Query: 100 KRHHDTCRILWKKISDKGDIYK 121
            ++      ++ K+ DKG IY+
Sbjct: 202 PKYEANQLRVFHKMYDKGFIYQ 223



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 22/118 (18%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q ++ +W D+ T++          +G++ +   AD+++ GKD L   F +    +     
Sbjct: 579 QDVLDIWFDSGTSWAHVL------EGAEQR---ADVYLEGKDQLGGWFQSSLLTSVATRK 629

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  K +  HGF L  KGEK+SKS+GNV+DP  VI            G D LR+++ 
Sbjct: 630 KAPY-KTLVVHGFTLGEKGEKMSKSIGNVVDPDVVINGGDDHTKDPPYGADVLRWWVA 686


>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 910

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ T++       ++        +PADL++ G D  R  F++    +  +S   
Sbjct: 524 IMDVWFDSGTSHQGCCAIREDLT------YPADLYLEGSDQYRGWFNSSLITSVAVSGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
           P  K++ S GF++   G K+SKSLGNVI P +V +E+G + +R
Sbjct: 578 PY-KELVSAGFVMDGNGNKMSKSLGNVISPNDVGKELGAEIIR 619



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +   N GV  K    
Sbjct: 59  YANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIEQVLVNNGVDRKSMPA 118

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +  + D  +D+   T + +       ++ K+ DKG 
Sbjct: 119 NKFRNKCKDYALKQVDKQRADFKKLGVLGD--WDNPYLTLDPKFEAEQIRVFGKMVDKGY 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 177 IYKGLKPIYWSPSSESALAEAEI 199


>gi|291277642|ref|YP_003517414.1| isoleucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964836|emb|CBG40695.1| isoleucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 918

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL- 284
           +I+ VW ++ + +        N    +A  +PAD+++ G D  R    +  + LLS  + 
Sbjct: 531 HILDVWFESGSTWQAVLKTKTNNPPYQAGNYPADMYLEGSDQHR--GWFQSSLLLSCAIL 588

Query: 285 ---PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              P  K + +HGF +  KGEK SKS GNVI P  +++  G + LR ++ 
Sbjct: 589 GEAPF-KSILTHGFTVDEKGEKQSKSKGNVIPPETILKNQGSEILRLWVA 637



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   +I     Y N   HIGHA   I+ D++ + H   G  + +T G D HG  I +  +
Sbjct: 48  KNSFFIHDGPPYANGNLHIGHALNKILKDIITKTHYFQGERITYTPGWDCHGLPIEQQVE 107


>gi|91202284|emb|CAJ75344.1| strongly similar to valyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 922

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 10/92 (10%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFIL-HKGEKISKS 306
           A ++P    V  + I+ F    W A ++   + + K+V     + HG IL  +G K+SKS
Sbjct: 503 AYYYPTSTLVTDRGIIYF----WVARMVMMGIEMVKQVPFSHVYIHGTILDEQGRKMSKS 558

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           LGN IDP+ +I+  G DA+R+ ++     G+D
Sbjct: 559 LGNGIDPLLMIDRYGADAVRFSIIILTTEGQD 590



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 17/82 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ--NSR 78
           H+GHA   II D+L R+ R+ G +VL+  GTD           +AG+ T+  V++  +S+
Sbjct: 81  HVGHALNNIIQDILIRWKRMQGFNVLWMPGTD-----------HAGIATQNVVERELSSK 129

Query: 79  NFRDMADVLDISYDDFIRTTEK 100
           N +      DI  + FI    K
Sbjct: 130 NIKRQ----DIGRERFIEEVWK 147


>gi|87201271|ref|YP_498528.1| isoleucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136952|gb|ABD27694.1| Isoleucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 968

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +         PD      WPA+L++ G D  R  F +    +       
Sbjct: 589 ILDVWFDSGSTHAFVLESGRWPDLQ----WPANLYLEGSDQHRGWFQSSLLESCGTRGRA 644

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P    + +HGF +  KG K+SKSLGN I PI+++ + G D LR +
Sbjct: 645 PY-DAILTHGFTMDAKGMKMSKSLGNTISPIDLMRDYGADILRLW 688



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K REK  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 49  KGREKFILHDGPPYANGDMHIGHALNHILKDMVCRTQTLRGKDAPYVPGWDCHGLPI 105


>gi|298373987|ref|ZP_06983945.1| leucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|301311782|ref|ZP_07217707.1| leucine--tRNA ligase [Bacteroides sp. 20_3]
 gi|298268355|gb|EFI10010.1| leucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|300830342|gb|EFK60987.1| leucine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 946

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ +RF RL G +VL   G D +G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   ++    N   +R+  + +   YD
Sbjct: 90  IQTGQHPEITTKNNIARYREQLEKIGFCYD 119


>gi|269123856|ref|YP_003306433.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315182|gb|ACZ01556.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 928

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 22/134 (16%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            +K  LKD+ L ++            + I+ VW D+  ++         P G   +  P 
Sbjct: 515 LIKHNLKDVELRKE------------RSILDVWFDSGVSHRAVL----RPRGYNIR--PV 556

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  F +    +   + + P  KK+ +HGF++  +G K+SKSLGN I P +
Sbjct: 557 DLYLEGSDQHRGWFQSSLLTSVASTFDSPY-KKLLTHGFVMDGQGRKMSKSLGNTITPKD 615

Query: 316 VIEEVGVDALRYFL 329
           +I+  G D LR ++
Sbjct: 616 IIDVHGADILRLWV 629



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 15/154 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KA 61
           E+   ++     Y N   HIGHA   ++ D++ ++ RL G +  +  G D HG  I  K 
Sbjct: 50  EKPTFFLHDGPPYANGNLHIGHAINKVLKDIILKYKRLQGFNAPYIPGWDTHGLPIEWKM 109

Query: 62  AQNAGVTTKVFVDQNSRNF--RDMADVLDISYDDFIR------------TTEKRHHDTCR 107
            Q+ G   K       RN   +     +++   DFIR            T  K       
Sbjct: 110 IQDLGEKAKEMSPLELRNACKKYALKSVEMQKKDFIRLGILGDWNNPYITLNKEFEAEEL 169

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +++ I + G +YKG    ++S   E    + E+
Sbjct: 170 RVFRDIYENGYVYKGLKPVYWSPTTETALAEAEI 203


>gi|260753979|ref|YP_003226872.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553342|gb|ACV76288.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 846

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R   YI     YP+ + H+GH     + DVLAR++R+ G +VL   G D  G     AA
Sbjct: 36  DRPHSYILEMFPYPSGRIHMGHVRNYTMGDVLARYYRMKGHEVLHPMGWDAFGMPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  + +   N    R+    +   I +   + T E  ++   + L+  +   G +Y
Sbjct: 96  MERKIHPREWTMSNIATMREQLKRIGFAIDWSRELATCEPSYYGQEQALFLDLYKAGLVY 155

Query: 121 K 121
           +
Sbjct: 156 R 156



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 32/47 (68%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  NV++P  ++++ G DA+R+F++ +    +D  + + G++
Sbjct: 620 EKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPERDLAWTEAGIE 666


>gi|188528187|ref|YP_001910874.1| isoleucyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|254782411|sp|B2UVG2|SYI_HELPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188144427|gb|ACD48844.1| isoleucyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|293189764|ref|ZP_06608480.1| leucine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821354|gb|EFF80297.1| leucine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 976

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 7   LYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            +I     YP+ +  H+GH    I  D LAR+ R+ G +VL+T G D  G    + A   
Sbjct: 54  FFILDMFPYPSGKGLHVGHPLGYIATDTLARYRRMKGDNVLYTMGYDAFGLPAEQYAVQT 113

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD 92
           G    +  +QN  N R     + +S+D
Sbjct: 114 GQHPAITTNQNIANMRRQLRRMGLSHD 140


>gi|260810764|ref|XP_002600118.1| hypothetical protein BRAFLDRAFT_66627 [Branchiostoma floridae]
 gi|229285404|gb|EEN56130.1| hypothetical protein BRAFLDRAFT_66627 [Branchiostoma floridae]
          Length = 1057

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILHK-GEKISKSLG 308
           F+P  L   G DIL F    W A ++   L     LP K+VF H  +    G K+SKSLG
Sbjct: 607 FYPGTLLETGHDILFF----WVARMVMMGLKMIGKLPFKEVFLHALVRDAHGRKMSKSLG 662

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV+DP++VI  + ++ L   L       K+    K G K+    D  NGI    + ++  
Sbjct: 663 NVVDPVDVINGITLENLHKLLENSNLDPKEVARAKQGQKE----DYPNGIPECGTDALRF 718

Query: 369 ILKDY 373
            L  Y
Sbjct: 719 ALCAY 723


>gi|148555761|ref|YP_001263343.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|189083151|sp|A5VA89|SYL_SPHWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148500951|gb|ABQ69205.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 835

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KPKSYVLEMFPYPSGRIHMGHVRNYTMGDVLARYRRMKGFEVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V    +   N    RD    +  + D
Sbjct: 92  EKKVHPGDWTRANIAAMRDQLKRIGFALD 120



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 32/47 (68%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  NV+DP  ++E+ G DA+R+F++ +    +D  + + G++
Sbjct: 611 EKMSKSKKNVVDPAPIVEQYGADAVRWFMLSDSPPERDLEWTESGIE 657


>gi|50511161|dbj|BAD32566.1| mKIAA1885 protein [Mus musculus]
          Length = 1086

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 23/145 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D  G      A  A V
Sbjct: 163 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWIPGSDHAG-----IATQAVV 217

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG---DIYKGCY 124
             +++ +Q  R         ++S +DF+R   +  H+    +++++   G   D  + C+
Sbjct: 218 EKQLWKEQRVRRH-------ELSREDFLRAVWQWKHEKGGEIYEQLCALGASLDWDRECF 270

Query: 125 S---GWYSLRDEAY---YNDDEVYK 143
           +   G  +   EA+   YN   +Y+
Sbjct: 271 TMDAGSSAAVTEAFVRLYNSGLLYR 295



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSAN 283
           ++  W  +     +  G+  + PD   A+F+P  L   G D+L F    +      L+  
Sbjct: 606 VLDTWFSSALFPFSALGWPRETPD--LARFYPLTLLETGSDLLMFWVGRMVMLGTQLTGQ 663

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           LP   KV  H  +   +G K+SKSLGNV+DP ++I
Sbjct: 664 LPF-SKVLLHSMVRDRQGRKMSKSLGNVLDPRDII 697


>gi|319952591|ref|YP_004163858.1| leucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421251|gb|ADV48360.1| leucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 1171

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKEKFYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPMGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G         N + +R+  D +  S+D
Sbjct: 89  AIQTGQHPATTTATNIKRYREQLDKIGFSFD 119


>gi|310643097|ref|YP_003947855.1| leucyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248047|gb|ADO57614.1| Leucyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 812

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 37  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQHA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   +    +N  NFR     L  SY  D  I TT+  ++   + ++ ++  +G  Y
Sbjct: 97  LDTGEHPREITVKNVNNFRRQIKSLGFSYDWDREISTTDPDYYKWTQWIFIQLYKRGLAY 156

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ +    DG+     H PV       +  +++ Y D+LL
Sbjct: 157 VAEVPVNWCPALGTVLANEEVI----DGKSERGGH-PVIRKPMRQWMLKITEYADRLL 209



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEK 302
           K + W P DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK
Sbjct: 524 KQREWMPVDLYIGGAEHAVLHLLYARFWHKVLYDIGVVETKEPFYKLVNQGMILGNNNEK 583

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GNVI+P +++   G D LR +
Sbjct: 584 MSKSRGNVINPDDIVNTFGADTLRIY 609


>gi|283850384|ref|ZP_06367673.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574410|gb|EFC22381.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 941

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++             + KF PADL++ G D  R  FH+    A       
Sbjct: 538 ILDVWFDSGTSFAAVL-----EKRPELKF-PADLYLEGSDQHRGWFHSSLLAALGTRGVA 591

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  ++V +HG+++   G K+SKSLGN ++P E+I++ G + LR +
Sbjct: 592 PY-RQVLTHGYVVDGDGRKMSKSLGNGMEPQEIIDKHGAEILRLW 635



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 20/126 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---------AKAAQNA 65
           Y N   H+GHA   I+ D++ +   L G    +  G D HG  I         AK  +N 
Sbjct: 60  YANGHLHMGHALNKILKDIIVKSRHLAGNQAPYVPGWDCHGLPIEHKVSQELKAKGKENL 119

Query: 66  GVTT---------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
              T           FVD   + F+ +    D  +DD   T    +     +      ++
Sbjct: 120 PAVTVRRLCRDYATKFVDIQRKEFKRLGVFGD--WDDPYLTMRPSYEAATALALCDFVER 177

Query: 117 GDIYKG 122
           G +Y+G
Sbjct: 178 GSVYRG 183


>gi|163755765|ref|ZP_02162883.1| valyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161324286|gb|EDP95617.1| valyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 878

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 11/104 (10%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-----NLPLPKKVFSHGFILHK- 299
           NP+  + K++ P +  V G DIL F    W A ++ A     ++     V+  G +  K 
Sbjct: 478 NPENEEIKYYYPTNDLVTGPDILFF----WVARMIIAGYEYRDMKPFTNVYLTGLVRDKQ 533

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           G K+SKSLGN  D +++IE  G D +R  L+   A G D  +D+
Sbjct: 534 GRKMSKSLGNSPDALKLIENYGADGVRVGLLLSAAAGNDLLFDE 577


>gi|156937807|ref|YP_001435603.1| isoleucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566791|gb|ABU82196.1| Isoleucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 1025

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 24/263 (9%)

Query: 226 YIMYVWID---ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           Y++ VW+D   A T  L   G  D  D     F+P D      D  R  F+ +       
Sbjct: 542 YVVDVWLDSGVAHTASLKQIGAEDYWD----LFYPYDWITEALDQTRGWFYTLLVTGVTW 597

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  K+V + G IL K G+K+SKS GNV+   +V +  G D +R+F   + A     
Sbjct: 598 HGRAPY-KQVLTQGHILDKHGKKMSKSKGNVVWAKDVFKTYGADPVRFFFAIKSAPWDSV 656

Query: 340 FYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +D + +K  KR    L N +       + +     + +     +    D  +L   +  
Sbjct: 657 RFDPEDIKLAKRTLDILWNSV-KFAKSYMELDKWSLEKLEEGLKSLEPEDSWVLWKLNEY 715

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP--WELKKTNPDRAS-TVLYVTV 452
            + + E ++   IHRA   +   + EV   +Y    +P  WE ++T    A+ + L++ +
Sbjct: 716 SKRVAEELERSAIHRAAQALQEFIVEVLSHKYITLVRPRVWEEEETPSKLAAYSALFLAL 775

Query: 453 EVIRQLAILLQA-FVPKLANKIF 474
           +     AI + A FVP LA  ++
Sbjct: 776 DA----AIRMSAPFVPFLAEYLY 794


>gi|282917018|ref|ZP_06324776.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319505|gb|EFB49857.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 408

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 30  QKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  Y
Sbjct: 90  LDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAY 149


>gi|256420300|ref|YP_003120953.1| leucyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035208|gb|ACU58752.1| leucyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 922

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D+ AR+ RL G +VL   G D  G    + A
Sbjct: 30  KPKCYVLDMFPYPSGAGLHVGHPLGYISSDIYARYKRLKGFNVLHPMGWDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    V    N  +FR   D +  S+D
Sbjct: 90  LETGQHPAVTTANNLASFRRQLDNIGFSFD 119


>gi|114564054|ref|YP_751568.1| isoleucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335347|gb|ABI72729.1| Isoleucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 943

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
           DL++ G D  R  F +    +  ++   P  K+V +HGF +  KG K+SKS+GNVI P++
Sbjct: 563 DLYLEGSDQHRGWFMSSLMISTAMNGKAPY-KQVLTHGFTVDGKGRKMSKSVGNVIAPLQ 621

Query: 316 VIEEVGVDALRYFLV 330
           VI ++G D LR ++ 
Sbjct: 622 VINKLGADILRLWVA 636



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I  K  Q  G   K  V
Sbjct: 62  YANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKVEQKVG---KPGV 118

Query: 74  DQNSRNFRD-----MADVLDISYDDFIR 96
             ++  FR+      A  +D   +DFIR
Sbjct: 119 KISAAEFREECRKYAAIQVDGQREDFIR 146


>gi|319408050|emb|CBI81704.1| Isoleucyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 978

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 19/152 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +          +G     WPAD++  G D  R  F +    +    A  
Sbjct: 572 ILDVWFDSGSTHSFVL------EGRSDLKWPADVYFEGSDQHRGWFQSSLLESCGTRACS 625

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HGF L   G+K+SKSLGN + P +VI+  G D  R +++         +++ 
Sbjct: 626 PY-KTVITHGFTLDENGKKMSKSLGNTVVPQDVIKTSGADIFRLWVM------TTDYWED 678

Query: 344 DGLKKRV---NADLANGIGNLVSRSVSMILKD 372
             L K++   N DL   + N +   +  +  D
Sbjct: 679 QRLGKKILQTNVDLYRKLRNAIRWMLGTLAHD 710



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+R    I     Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 52  KDRPLYVIHDGPPYANGNIHIGHALNKVLKDVVVRSFQMRGFNANYVPGWDCHGLPI 108


>gi|317179600|dbj|BAJ57388.1| isoleucyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|241761613|ref|ZP_04759700.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373921|gb|EER63454.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 846

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R   YI     YP+ + H+GH     + DVLAR++R+ G +VL   G D  G     AA
Sbjct: 36  DRPHSYILEMFPYPSGRIHMGHVRNYTMGDVLARYYRMKGHEVLHPMGWDAFGMPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  + +   N    R+    +   I +   + T E  ++   + L+  +   G +Y
Sbjct: 96  MERKIHPREWTMSNIATMREQLKRIGFAIDWSRELATCEPSYYGQEQALFLDLYKAGLVY 155

Query: 121 K 121
           +
Sbjct: 156 R 156



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 32/47 (68%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  NV++P  ++++ G DA+R+F++ +    +D  + + G++
Sbjct: 620 EKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPERDLAWTEAGIE 666


>gi|294787261|ref|ZP_06752514.1| valine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484617|gb|EFG32252.1| valine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 970

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR---FHAIYWPAFLL 280
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R   F +I   + L 
Sbjct: 536 IMDTWATSSLTPQIVTRWAEPGEENEALFKATFPMDLRPQGQDIIRTWLFSSID-RSHLE 594

Query: 281 SANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-- 335
           +  LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+     AC  
Sbjct: 595 NGCLPWAHTTLS-GWILDPDHK--KMSKSKGNVVVPTEPIEKFGADAVRYW----AACAR 647

Query: 336 -GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-------- 386
            G D  Y+   +K  +   LA  + N    ++++  +D +  +   GA  ++        
Sbjct: 648 LGTDAAYEVGQMK--IGRRLAIKLLNATKFALAIGREDENHHV---GASQQAEWKFSDVT 702

Query: 387 ---DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
              DE++++  + V++   E + +    RAL  +
Sbjct: 703 VDLDEAVMAALAIVIETATEALNSYDHARALETI 736



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     D++ARF R++G DV +  G D++G    +
Sbjct: 61  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDIIARFKRMNGYDVFYPMGWDDNGLPTER 120

Query: 61  AAQN 64
             QN
Sbjct: 121 RVQN 124


>gi|228473112|ref|ZP_04057869.1| valine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275694|gb|EEK14471.1| valine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 879

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 28/244 (11%)

Query: 242 TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295
            G LD PD  + K++ P    V G DIL F    W A ++ A      +     V+  G 
Sbjct: 476 NGVLD-PDNKEFKYYYPTQDLVTGPDILFF----WVARMIIAGYEFAGEKPFTNVYLTGL 530

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K   K+SKSLGN  D +++I++ G D +R  L+   + G D  +D + L ++ +A  
Sbjct: 531 VRDKLRRKMSKSLGNSPDALKLIKDFGADGVRVGLLLSSSAGNDLLFD-EALCQQGSA-F 588

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN I N         + D    IP P    +S     +   ++L E  ++     I  AL
Sbjct: 589 ANKIWNAFRLIKGWQVAD----IPQPDYAKQSILWFKNKFQKILSETEDDFSKYRISDAL 644

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVIRQLAILLQAFVPKLA 470
            ++  LV      +D    W L+   P   S +   T    + +  +   LL  F+P + 
Sbjct: 645 MKIYKLV------WDDFCSWLLEMIKPAFGSPIDKETYREVISLFEENLKLLHPFMPFVT 698

Query: 471 NKIF 474
            +I+
Sbjct: 699 EEIW 702


>gi|225859414|ref|YP_002740924.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782441|sp|C1C8P8|SYI_STRP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225720958|gb|ACO16812.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 930

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---- 70
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 71  VFVDQNSRNF--------RDMADVLDISYD-DFIRTTEKRHHDTCRI-LWKKISDKGDIY 120
           V   +  R +        RD    L +S D + +  T    ++  +I ++ ++++KG IY
Sbjct: 118 VEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|187607938|ref|NP_001120515.1| isoleucyl-tRNA synthetase 2, mitochondrial [Xenopus (Silurana)
           tropicalis]
 gi|170285160|gb|AAI61415.1| LOC100145647 protein [Xenopus (Silurana) tropicalis]
          Length = 992

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 19/137 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----Q 56
           K +++  +     Y N  PH+GHA   I+ D+  RFH + G  V +  G D HG     +
Sbjct: 80  KTKKEFSLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVSYVPGWDCHGLPIELK 139

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-------- 108
            +A+  + A   +   + + ++ F + A  ++     FIR       D C          
Sbjct: 140 ALAELGEEAENMSPTEIRRKAKMFAEKA--IEKQKSSFIRWGIMADWDKCYYTFDPKYEA 197

Query: 109 ----LWKKISDKGDIYK 121
               ++ K+ DKG IY+
Sbjct: 198 KQLDIFYKMYDKGHIYQ 214



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 26/118 (22%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           ++ +W D+ T++          DG +     AD+++ GKD L     ++ + LL++    
Sbjct: 573 VLDIWFDSGTSWAHVL-----EDGEQR----ADVYMEGKDQL---GGWFQSSLLTSVAAR 620

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
           N    + +  HGF L  KGEK+SKS+GNV+DP  VI            G D LR+++ 
Sbjct: 621 NKAPYRNIIVHGFTLSEKGEKMSKSVGNVVDPDVVINGGQDKVNEPAYGADVLRWWVA 678


>gi|91227670|ref|ZP_01261947.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188449|gb|EAS74743.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 942

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|30316165|sp|Q8FMI8|SYC_COREF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 459

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 121/325 (37%), Gaps = 69/325 (21%)

Query: 14  AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           A P AQPHIGH    +  D+L R+    GLDV F     +   KI   A   G     +V
Sbjct: 31  ATPQAQPHIGHVRSGVAFDILRRWLLAKGLDVAFVRNVTDIDDKILTKAAEHGRPWWEWV 90

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR--HHDTCRILW-KKISDKGDIYKGCYSGWYSL 130
               R F    + L +       + E R   H T  + + +++ D G  Y+         
Sbjct: 91  STYEREFTWAYNTLGV----LPPSVEPRATGHVTQMVQYMQRLIDNGFAYE--------- 137

Query: 131 RDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            + + Y D   +  A+G  Y +   N V+ ME+                           
Sbjct: 138 VNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQ--------------------------- 170

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGY 244
                E  +F K G +D +L      W    P +P +    W +    +        T Y
Sbjct: 171 ----GETDNFGKRGPQDFAL------WKAAKPGEPSWPT-PWGEGRPGWHLECSAMATYY 219

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L       A+F   D+H  G D+   H     A   +A     +    + ++   GEK+S
Sbjct: 220 LG------AEF---DIHCGGLDLQFPHHENEIAQAHAAGDGFARYWMHNHWVTMAGEKMS 270

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFL 329
           KSLGNV+    ++E+V    LRY+L
Sbjct: 271 KSLGNVLSVPNMLEKVRPVELRYYL 295


>gi|330805121|ref|XP_003290535.1| isoleucyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325079322|gb|EGC32927.1| isoleucyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 1065

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 15/237 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +PA  H I + + +    ++   +LS  L   P  + +  +G +L   G+K+SK L N
Sbjct: 554 KIFPA--HFIAEGLDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLASDGKKMSKRLKN 611

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRS 365
             DP+EV+ + G D+LR +L+       +   + + G++   K V     N     V  +
Sbjct: 612 YPDPMEVVSKYGADSLRLYLINSPVVKAEPLKFQEKGVQDMIKDVFLPWFNAYRFFVQNA 671

Query: 366 VSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +          +P      +S    D+ +L+ C  +++ +R  M    ++  + +++  +
Sbjct: 672 LRFEKSQNTKFVPDINVALKSENVMDKWVLASCQSLIKFVRVEMAAYRLYTVVPKLVRFI 731

Query: 422 SEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++  ++        K +N D    + L +  EV+  + I +  F P     I+  L
Sbjct: 732 EDLTNWYVRLNRKRFKGSNGDADCLSSLNILYEVLMTVTIAMGPFTPFFTEFIYQNL 788


>gi|296123966|ref|YP_003631744.1| leucyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016306|gb|ADG69545.1| leucyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 936

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 17/155 (10%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K+Y+     YP+    H+GH       D+  RF R+ G +VL   G D  G    + A
Sbjct: 31  KPKMYVLDMFPYPSGDGLHVGHPEGYTATDITCRFARMRGKNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G   ++  ++N   F+     L  SY D+ R       D  R  W +      I+  
Sbjct: 91  VETGTHPRITTEKNIATFKRQLKSLGFSY-DWERELATTDPDYVR--WTQW-----IFLQ 142

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  WY    E        + G DGQ    +  P+
Sbjct: 143 LFDTWYDETCE--------WTGPDGQVRTGRGRPI 169


>gi|225631226|ref|ZP_03787919.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591079|gb|EEH12268.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 792

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 113/278 (40%), Gaps = 36/278 (12%)

Query: 220 IPDDPQYIMYVW----IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
           IPD  Q +M  W    I    + L        P+      +PADL     +I+R  A Y 
Sbjct: 428 IPD--QDVMDTWATSSITPQLSALAVNSEFSLPNHRYDTIFPADLRSQSHEIIRTWAFYT 485

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A   + +LP    + S   +    +K+SKS GN+I P  ++E  G D +RY+     
Sbjct: 486 ILKAHYHANSLPWKNIMISGWCLTDDKKKMSKSKGNIITPHVILETYGADVVRYWAANS- 544

Query: 334 ACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             G D  Y ++  K  KR+   L N      S+ VSM ++ +  M     A    D+ IL
Sbjct: 545 RLGVDTVYSENTFKIGKRLVTKLWNA-----SKFVSMFMEKHQVM-SINSAHETMDKWIL 598

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWEL-----KKTN 440
           S   +V+    E   N L+     + +S V E       D Y +  K          +TN
Sbjct: 599 SKLYKVI----ERATNNLLRFEYCEALSAVEEFFWKDFCDNYLELAKKRAYGDKVDSETN 654

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                ++ YV   ++R    L   F+P +  +I+  L+
Sbjct: 655 LSAKQSLAYVLNIILR----LFAPFLPYITEEIYHQLY 688



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 13/85 (15%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAGVTTKV- 71
          HIGH +     D +ARF R+ G DV +  G D++G        Q     A+  G    + 
Sbjct: 15 HIGHIFSYCHTDFIARFQRMLGKDVFYPIGFDDNGLPTERLVEQTYKTRAKEVGREKLIE 74

Query: 72 ----FVDQNSRNFRDMADVLDISYD 92
               ++++ + F+++   + ISYD
Sbjct: 75 MCHEVIEKSKQEFKELLKSVGISYD 99


>gi|254283842|ref|ZP_04958810.1| valyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680045|gb|EED36394.1| valyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 921

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 13/71 (18%)

Query: 8  YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
          Y S AI  PN     H+GH ++  I D L R+HR+ G D L+  GTD           +A
Sbjct: 32 YFSIAIPPPNVTGSLHMGHGFQQAIMDALVRYHRMRGQDTLWQVGTD-----------HA 80

Query: 66 GVTTKVFVDQN 76
          G+ T++ V++ 
Sbjct: 81 GIATQMVVERQ 91



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 142/365 (38%), Gaps = 85/365 (23%)

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------DDP----QY- 226
           EF+ P +  N   ++++  ++D  +SR+ + WG +IP             D+P    QY 
Sbjct: 377 EFV-PKQWENTYFAWMRD-IQDWCISRQLW-WGHRIPAWYDDAGNVYVGEDEPAVREQYS 433

Query: 227 ------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                       ++  W  +     +T G+ +      ++F P  + V G DI+ F    
Sbjct: 434 LSPTVGLHQDEDVLDTWFSSALWTFSTLGWPEQ-HAELSRFHPTSVLVTGFDIIFF---- 488

Query: 275 WPAFLLSANL------PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDAL-- 325
           W A ++  +L      P  K V+ HG +    G+K+SKS GNVIDPI++I+ + +D L  
Sbjct: 489 WVARMIMMSLHFLGEAPF-KAVYVHGLVRDGDGQKMSKSKGNVIDPIDLIDGISLDDLIA 547

Query: 326 --------------------RYFLVREIACGKDG----FYDKDGLKKRVNADLANGIG-- 359
                               R+F       G D     FY      + +  D+    G  
Sbjct: 548 KRTSSMMQPQLARKIEKQTRRHFPDGITGYGTDALRFTFYSLASTGRDIRFDIGRMEGFR 607

Query: 360 ---NLVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
              N +  +   +L + +G    P      T +D  ILS   +   E    +    + RA
Sbjct: 608 NFCNKLWNAARYVLMNCEGHRSDPNVAIELTLADRWILSRLQQTTTEFDRAITQYRLDRA 667

Query: 414 LAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              +   +     D Y +  KP  W+   ++P   +      V+V+  +  LL   +P +
Sbjct: 668 SQVLYDFIWNEYCDWYLELSKPVLWD-DNSDPAILAGTRQTLVQVLETILRLLHPLMPFI 726

Query: 470 ANKIF 474
             +I+
Sbjct: 727 TEEIW 731


>gi|71891905|ref|YP_277635.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|84029508|sp|Q493S3|SYI_BLOPB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71796011|gb|AAZ40762.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 942

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+      +T Y   P+  + +    DL++ G D  R  F +    + +++   P  
Sbjct: 536 VWFDS-----GSTHYSVIPERLEYRKQSPDLYLEGSDQYRGWFMSSLIISTVITGQAPY- 589

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++V +HGF +  +G K+SKSLGNVI P E+I++ G D LR ++
Sbjct: 590 REVLTHGFTVDAQGRKMSKSLGNVISPQEIIKDFGADILRLWI 632



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 2   KEREKLYI-STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++KL+I      Y N   H+GHA   ++ D++ ++  L G +  +  G D HG  I  
Sbjct: 45  KSKKKLFILHDGPPYVNGSIHLGHAVNKVLKDIILKYKTLTGYNAPYIPGWDCHGLPIEL 104

Query: 61  AAQNAGVTTKVFVDQN-----SRNFRDMADVLDISYDDFIR 96
             +       V VD N      RN+  + D ++I   DF+R
Sbjct: 105 QVERLIGQLGVNVDPNEFRSICRNY--VLDQIEIQKKDFVR 143


>gi|56552331|ref|YP_163170.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|60390665|sp|Q5NMK1|SYL_ZYMMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56543905|gb|AAV90059.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 846

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R   YI     YP+ + H+GH     + DVLAR++R+ G +VL   G D  G     AA
Sbjct: 36  DRPHSYILEMFPYPSGRIHMGHVRNYTMGDVLARYYRMKGHEVLHPMGWDAFGMPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  + +   N    R+    +   I +   + T E  ++   + L+  +   G +Y
Sbjct: 96  MERKIHPREWTMSNIATMREQLKRIGFAIDWSRELATCEPSYYGQEQALFLDLYKAGLVY 155

Query: 121 K 121
           +
Sbjct: 156 R 156



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 32/47 (68%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           EK+SKS  NV++P  ++++ G DA+R+F++ +    +D  + + G++
Sbjct: 620 EKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPERDLAWTEAGIE 666


>gi|300707853|ref|XP_002996120.1| hypothetical protein NCER_100842 [Nosema ceranae BRL01]
 gi|263511639|sp|C4V8L1|SYLC_NOSCE RecName: Full=Probable leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|239605390|gb|EEQ82449.1| hypothetical protein NCER_100842 [Nosema ceranae BRL01]
          Length = 884

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 16/103 (15%)

Query: 243 GYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSH 293
           GYLD  +  +  F   +P DL V GKD+++ H +    F +  ++ L      PK++F++
Sbjct: 502 GYLDLLEKCRNNFQYFYPVDLRVSGKDLIKNHLL----FFMFNHVALFDEKYWPKRIFTN 557

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           G ++   EK+SKS GN +   + + + G  A R  L     CG
Sbjct: 558 GHLMLNKEKMSKSTGNFLSVDDALLKYGKSATRMCLA---VCG 597



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 33/66 (50%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          + ++ K +I+    Y N + H+GH Y +  AD ++ +  L G +VLF       G  IA 
Sbjct: 27 ISDKPKYFITFPYPYMNGKLHLGHLYSISKADFMSYYKELQGFNVLFPLAFHCTGMPIAA 86

Query: 61 AAQNAG 66
           A+  G
Sbjct: 87 LAKKLG 92


>gi|261838697|gb|ACX98463.1| isoleucyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|261402968|ref|YP_003247192.1| leucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369961|gb|ACX72710.1| leucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 942

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 30/229 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D     KD++  H  ++  F   A  P    P+ +  +G++  +G+K+SKS G V+
Sbjct: 582 YYPVDWRCSAKDLIPNHLTFY-IFNHVAIFPEEHWPRGIVVNGYVTIEGKKLSKSKGPVL 640

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDG---FYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             +EV E+ G D  R+++       +D    F + +  KK +           +++ V+ 
Sbjct: 641 PVLEVAEKFGADVGRFYITTCAELPQDADIKFKEMENTKKVLERIY------FLTKEVA- 693

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
              D           T  D+ +LSV +R +++  E M N  + +A   +  L+  +  Y 
Sbjct: 694 ---DRKKTEKVKEELTYIDQWLLSVLNRAIKQYSEFMDNFELRKAGILIYQLLDNLKWY- 749

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                         R    L V  E +  L  L+  F P +  ++++IL
Sbjct: 750 ------------KRRGGDNLNVLEEFLEVLIKLMCPFTPHICEEMWEIL 786



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 32/61 (52%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          EREK +I+ A  Y N   H GH     I +V+ARF R+   +VL+T G    G  I   A
Sbjct: 28 EREKFFITAAFPYLNGVLHAGHLRTFTIPEVVARFQRMKNRNVLWTFGYHVTGTPILGLA 87

Query: 63 Q 63
          +
Sbjct: 88 E 88


>gi|111115567|ref|YP_710185.1| valyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|110890841|gb|ABH02009.1| valyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 875

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G +   DP  ++  W  +     ++ G+ +  D  K  ++P +  +   DI+ F    W 
Sbjct: 439 GKRFVQDPD-VLDTWFSSWLWPFSSLGWPNITDDFK-NYYPTNTLITAYDIIFF----WV 492

Query: 277 AFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++ A L    ++ F   +I       +G+K+SKSLGN IDP+++I E G D+L + + 
Sbjct: 493 ARMVMAGLEFTGQIPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIIHEYGSDSLHFTIS 552

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G+D   D       + A  AN + N    S  ++L   +  I     F + D+ +
Sbjct: 553 FLSVQGQDLNIDSKDF--MLGAKFANKVFN---ASKFILLNIKNRKILNDLEFNDIDKWL 607

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           L+  +  +  +  +  N   + A   V         D Y +  K  +L   N D  +  +
Sbjct: 608 LTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNSENVDIQNMAI 666

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
              +  +++  ++L  F+P +  KI+
Sbjct: 667 SKLLFFLKKALLILHPFIPFVTEKIY 692



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 25/152 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ D+L R+ R+   + L+  GTD  G           + I K+    +   
Sbjct: 52  HMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFERHLKNIGKSKNDYEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHD--TCRI---LWKKISDKGDI 119
           +  ++F   D++     +    L  SYD    T E+   D   C+    ++K +  KG I
Sbjct: 112 LVQEIFKLKDKHRGVIVNQIKKLGASYD---HTRERFTLDDSLCKAVNKVFKDLYSKGLI 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           Y+G Y         +  +D+E+ YK  DG+ Y
Sbjct: 169 YRGEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|329922076|ref|ZP_08277857.1| leucine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328942397|gb|EGG38662.1| leucine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 637

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 9/178 (5%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 38  KPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   + F   N   FR     L  SY  D  I TT+  ++   + ++ ++  +G  Y
Sbjct: 98  MDTGKHPREFTVLNIDTFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYKRGLAY 157

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                  W         N++ +    DG+     H PV       +  R++ Y D+LL
Sbjct: 158 VAEVPVNWCEALGTVLANEEVI----DGKSERGGH-PVVRKPMRQWILRITEYADRLL 210



 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFIL-HKGEK 302
           K K W P DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK
Sbjct: 525 KQKEWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVDTKEPFQKLVNQGMILGNNNEK 584

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKS GNVI+P +++ E G D LR +
Sbjct: 585 MSKSRGNVINPDDIVNEYGADTLRVY 610


>gi|320103816|ref|YP_004179407.1| leucyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751098|gb|ADV62858.1| leucyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 946

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R KLY+     YP+    H+GH       D+ AR+ R+ G DVL   G D  G    
Sbjct: 28  LPARPKLYVLDMFPYPSGDGLHVGHPEGYTATDIYARYKRMRGYDVLHPMGWDAFGLPAE 87

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A   G         N   F+   + L  SYD
Sbjct: 88  QHAIKTGTHPGAKTQANIATFKRQIESLGFSYD 120



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 55/245 (22%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------ 298
           +D P G   +  P D   I   +L+      PA ++             GF++       
Sbjct: 661 IDTPQGPTLQSTPPDAQPIPVRLLKLD----PAAVVKTG---------SGFVMADHPEIK 707

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKS GNVI+P  V+ E G D+LR +         + F       K  +    
Sbjct: 708 VEGRASKMSKSRGNVINPDGVVAEYGADSLRLY---------EMFMGPLEATKPWSMKGV 758

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT--PGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
            G+   ++R+  MI+ D +   P   P     E    ++ + +R +  + E+++    + 
Sbjct: 759 EGVYRFLNRAWRMIV-DEEAETPRLHPKVVDIEPSAELVRLTARTIAAVTEDLEGLRFNT 817

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+++++  V+ V        P E +                V+    +LL    P +A +
Sbjct: 818 AISRLMEFVNAV-------APLEARPK-------------AVLETFTLLLAPMAPHIAEE 857

Query: 473 IFDIL 477
           ++++L
Sbjct: 858 LWEVL 862


>gi|315227182|ref|ZP_07868969.1| valyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|315119632|gb|EFT82765.1| valyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 987

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR---FHAIYWPAFLL 280
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R   F +I   + L 
Sbjct: 553 IMDTWATSSLTPQIVTRWAEPGEENEALFKATFPMDLRPQGQDIIRTWLFSSID-RSHLE 611

Query: 281 SANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-- 335
           +  LP      S G+IL   HK  K+SKS GNV+ P E IE+ G DA+RY+     AC  
Sbjct: 612 NGCLPWAHTTLS-GWILDPDHK--KMSKSKGNVVVPTEPIEKFGADAVRYW----AACAR 664

Query: 336 -GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-------- 386
            G D  Y+   +K  +   LA  + N    ++++  +D +  +   GA  ++        
Sbjct: 665 LGTDAAYEVGQMK--IGRRLAIKLLNATKFALAIGREDENHHV---GASQQAEWKFSDVT 719

Query: 387 ---DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
              DE++++  + V++   E + +    RAL  +
Sbjct: 720 VDLDEAVMAALAIVIETATEALNSYDHARALETI 753



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     D++ARF R++G DV +  G D++G    +
Sbjct: 78  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDIIARFKRMNGYDVFYPMGWDDNGLPTER 137

Query: 61  AAQN 64
             QN
Sbjct: 138 RVQN 141


>gi|262395188|ref|YP_003287042.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338782|gb|ACY52577.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 942

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|254514076|ref|ZP_05126137.1| valyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676319|gb|EED32684.1| valyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 921

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 55/295 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+  + +  + ++ P  + V G DI+ F    W A ++   L L
Sbjct: 446 VLDTWFSSALWTFSTLGWPQDTEMLQ-RYHPTSVLVTGFDIIFF----WVARMIMMTLHL 500

Query: 287 P-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV-------------------- 320
                 K+V+ HG +   +G+K+SKS GNV+DPI++I+ +                    
Sbjct: 501 RGEVPFKQVYVHGLVRDAEGQKMSKSKGNVLDPIDLIDGIDLHSLIEKRTSGLMQPQQAQ 560

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      A G+D  +D   ++   N    N I N  +
Sbjct: 561 RIREATQRQFPDGINAYGTDALRFTFYSLAATGRDIKFDIGRIEGFRN--FCNKIWN-AA 617

Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           R V M  +  D  +    P     S+  I S   RVL+ +R++M +     A   +   +
Sbjct: 618 RYVLMNCEGQDCGLDAELPVTLGPSERWIESELQRVLERLRKSMSSYRFDLASQGLYDFI 677

Query: 422 --SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                D Y +  K     +++P  A       +  + Q    L   +P +  +I+
Sbjct: 678 WNEYCDWYLELSKVSLRDESDPAAARGTRRTLIRTLEQSLRALHPLMPYITEEIW 732



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GH ++  I D L R+HR+ G D L+  GTD           +AG+ T++ V++ 
Sbjct: 47 HMGHGFQETIIDALVRYHRMAGYDTLWQVGTD-----------HAGIATQMIVERQ 91


>gi|219684226|ref|ZP_03539170.1| valyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672215|gb|EED29268.1| valyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 875

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 18/228 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P +  +   DI+ F    W A ++ A L    ++ F   +I       +G K+SKSLG
Sbjct: 475 YYPTNTLITAYDIIFF----WVARMVMAGLEFTGQIPFRDVYITPLLRDKQGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+++I E G D+LR+ L      G+D   + D     + A  AN + N  S+ + +
Sbjct: 531 NGIDPLDIIHEYGSDSLRFTLSFLSVQGQD--LNIDAKDFMLGAKFANKVFN-ASKFILL 587

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L++ +  +     F + D+ +L+  +  +  +  +  N   + A   V         D 
Sbjct: 588 NLENRE--VFNDLKFNDIDKWLLTSLNSAILGVESSFANYKYNEASKFVYEFFWNDFCDW 645

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+
Sbjct: 646 YIEISKI-DLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIY 692



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 21/150 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ D+L R+ R+   + L+  GTD  G           +KI K+    +   
Sbjct: 52  HMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFERNLKKIGKSKDDFEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI---LWKKISDKGDIYK 121
           +  ++F   D++     +    L  SYD   R         C+    ++K +  KG IY+
Sbjct: 112 LVKEIFKLKDKHRGVIVNQIKKLGASYDH-SRERFTLDESLCKAVNKVFKDLYSKGLIYR 170

Query: 122 GCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           G Y         +  +D+E+ YK  DG+ Y
Sbjct: 171 GEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|251796200|ref|YP_003010931.1| leucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543826|gb|ACT00845.1| leucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 811

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 18/182 (9%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILH-KGEK 302
           K K W P DL++ G +    H +Y   W   L    +   K+ F    + G IL    EK
Sbjct: 522 KQKEWLPVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVDTKEPFHKLVNQGMILGTNNEK 581

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVI+P +++ E G D LR + +         F       K  N +   G    +
Sbjct: 582 MSKSRGNVINPDDIVNEFGADTLRMYEM---------FMGPLEATKPWNTNGVEGTYRFL 632

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR   + + +   +        E+ ++      R ++++ ++ +N   + A++Q++  V+
Sbjct: 633 SRVWRLFVGEDGSVNAKITNDGETTKAFKQTWHRSIKKVTDDFENLRFNTAISQLMIFVN 692

Query: 423 EV 424
           E 
Sbjct: 693 EA 694



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ A  H+GH       D+++R+ R+ G +VL   G D  G    + A
Sbjct: 35  KKKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +    +N  NFR     L  SY  D    TT+  ++   + ++ ++ +KG  Y
Sbjct: 95  LQTGRHPREITVENINNFRRQIKSLGFSYDWDREFSTTDPDYYKWTQWIFIQLYNKGLAY 154


>gi|149185096|ref|ZP_01863413.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831207|gb|EDL49641.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 837

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 6/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DVLAR+ +  G +VL   G D  G     AA
Sbjct: 32  DKPKSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKKATGHEVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N  + +     L  + D    + T E  ++   + L+  + + G +Y
Sbjct: 92  MEKGVHPGAWTRDNIEHMKAQLKRLGFALDWSRELATCEPDYYGHEQALFIDLYEAGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +      +   D     +++V  G  G    A+   V+  +   +F +++A+ ++LL
Sbjct: 152 RKESEVNWDPVDMTVLANEQVIDG-KGWRSGAE---VEKRKLNQWFLKITAFAEELL 204



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 34/173 (19%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP  +I+  G DA+R+F++ +    +D  + + G++         G    
Sbjct: 613 KMSKSKKNVVDPDTIIDTYGADAVRWFMLSDSPPERDLPWSEAGIE---------GCSRF 663

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R +  +   YD      GA  E D+++L    + +  + E+++    ++A+A++  L 
Sbjct: 664 VHR-LWRLFAAYDA-----GASGE-DKALLRKTHQTVAAVAEDIEALGFNKAVARIYELT 716

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+            K  P  + +      + IR L  L+   +P LA + +
Sbjct: 717 GAVE------------KAAPSASRS------QAIRTLVQLVAPMMPHLAEEAW 751


>gi|332170077|gb|AEE19332.1| leucyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 996

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 31/197 (15%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           ++ K Y+     YP+ A  H+GH    I +DV +R+ RL G +VL   G D  G    Q 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDVYSRYKRLKGFNVLHPQGYDSFGLPAEQY 88

Query: 58  IAKAAQNAGVTTKVFVDQNSRN-------FRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
             +  Q+  VTTKV ++    N       +R   D +  S+D    +RT+   ++   + 
Sbjct: 89  AIQTGQHPAVTTKVNIEGGVDNQGNVIAGYRKQLDKIGFSFDWSREVRTSNPEYYKWTQ- 147

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP------VQWMEE 162
            W        I+   ++ WY+ +D       E    A  +  NA+ N         +  E
Sbjct: 148 -W--------IFTELFNSWYN-KDTDKAEAIETLVSAFAKTGNAEVNAACDDNITPFTAE 197

Query: 163 EGYFFRLSAYQDKLLSY 179
           E   F     QD LL Y
Sbjct: 198 EWNAFTEKEQQDILLQY 214



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 47/195 (24%)

Query: 295 FILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           F+L +G        EK+SKS  NV++P ++ E+ G D LR +         + F      
Sbjct: 754 FVLEEGVYKVGREVEKMSKSKYNVVNPDQICEQYGADTLRMY---------EMFLGPLEQ 804

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES----ILSVCSRVLQEIR 402
            K  N     G+ N + +   +     D       AF  +DE+     L    + ++++ 
Sbjct: 805 AKPWNTAGITGVHNFLKKFWKLYHNGAD------EAFNVTDEAPSKDSLKTLHKTIKKVE 858

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           E+++N   + +++  +  V+E+     AQK                  + EV+  L IL+
Sbjct: 859 EDIENFSFNTSVSTFMIAVNEL----GAQK----------------CTSREVLESLVILI 898

Query: 463 QAFVPKLANKIFDIL 477
             + P +A +I++ L
Sbjct: 899 APYAPHIAEEIWNKL 913


>gi|258541833|ref|YP_003187266.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632911|dbj|BAH98886.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635968|dbj|BAI01937.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639023|dbj|BAI04985.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642077|dbj|BAI08032.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645132|dbj|BAI11080.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648187|dbj|BAI14128.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651240|dbj|BAI17174.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654231|dbj|BAI20158.1| isoleucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 971

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 13/122 (10%)

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKIS 304
           G     +PADL++ G D    H  ++ + LL +     +   K V ++GF+L  +G K+S
Sbjct: 582 GQPGLSFPADLYLEGSDQ---HRGWFQSSLLESVGTRGVSPYKAVVTNGFVLDEQGRKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIG 359
           KSLGNVI P +V + +G D LR ++V      ++  GK+    +  L +R+   L   +G
Sbjct: 639 KSLGNVIAPQDVNDSLGADVLRLWVVNSDTNDDLRIGKEILKQQGELYRRLRNTLRWLLG 698

Query: 360 NL 361
            L
Sbjct: 699 AL 700



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I  DV+ R HR+ G  V +  G D HG  I
Sbjct: 72  YANGHLHIGHAMNKINKDVINRAHRMSGYGVRYVPGWDCHGLPI 115


>gi|242238039|ref|YP_002986220.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130096|gb|ACS84398.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 940

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 25/212 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     + VW D+ + + +         G  A     D+++ G D  R  F +    
Sbjct: 529 KVPD----TLDVWFDSGSTHASVVDVRPEFAGHAA-----DMYLEGSDQHRGWFMSSLMI 579

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A  +    P  ++V +HGF +  +G K+SKS+GN I P +V++++G D LR ++      
Sbjct: 580 ATAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTIAPQDVMDKMGADILRLWIGSTDYS 638

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV-- 393
           G     D+  + KR +AD    I N    +   +L + +G  P        D  +L    
Sbjct: 639 GDIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPALHTVKPEDMVVLDRWA 691

Query: 394 --CSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
             C++  Q EI E  ++   HR + +++   S
Sbjct: 692 VGCAKAAQEEIVEAYESYDFHRVVQRLMQFCS 723


>gi|297587185|ref|ZP_06945830.1| isoleucine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297575166|gb|EFH93885.1| isoleucine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 1035

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 18/233 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+++   + +++   P  K V  +  IL K G+K+SKS GN 
Sbjct: 543 KVFPADFINEGIDQTRGWFYSLLAISTMITGKAPY-KNVLVNDLILDKDGKKMSKSRGNT 601

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPIE+ ++ G D +R++ +          +D  GL++ V +       N  + +   + 
Sbjct: 602 IDPIELFDKYGADVVRFYSLYVSPPWIPTKFDVSGLQE-VESKFFRSFRN--TYNFFQMY 658

Query: 371 KDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVIS--LVS 422
              D   PT   F E       D+ ILS  + + +   ENM ++  +  +A+ IS  ++ 
Sbjct: 659 ATTDETDPTE-YFVEYKDRAVIDKWILSKFTNLQKFYFENM-DKFEYTKVAREISNFVIE 716

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIF 474
           ++  ++  +      KT  D     +Y  T E++  L  L+  F P +A +++
Sbjct: 717 DLSNWYIRRNRRRFWKTEMDDDKKSVYNTTYEILVGLTKLIAPFTPFIAEEMY 769


>gi|156083837|ref|XP_001609402.1| leucyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796653|gb|EDO05834.1| leucyl-tRNA synthetase, putative [Babesia bovis]
          Length = 782

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 11/182 (6%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E  K Y    I YP+ +  H+GH       DV+ R+ R+ G  VL   G D  G    
Sbjct: 106 MPECPKFYGLCMIPYPSGEGLHVGHLLGYTALDVVCRYKRMQGYQVLCPIGWDSFGLPAE 165

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
           + A++ G   K    +N   F+     +  ++D    + T++  ++   + ++++    G
Sbjct: 166 RYAESVGRDVKQVTLENIARFKHQLKRMGFAFDWSRELATSDPGYYKWTQWMFQEFYRSG 225

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             Y+      +         ++EV  G  A G +   + N  QW+       R+S Y  +
Sbjct: 226 IAYRANQLVNWCPDLGTVLANEEVRNGLSARGGFPVYRKNAQQWL------LRISQYAQR 279

Query: 176 LL 177
           LL
Sbjct: 280 LL 281


>gi|34536678|dbj|BAC87668.1| unnamed protein product [Mus musculus]
          Length = 1059

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 23/145 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D  G      A  A V
Sbjct: 140 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWIPGSDHAG-----IATQAVV 194

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG---DIYKGCY 124
             +++ +Q  R         ++S +DF+R   +  H+    +++++   G   D  + C+
Sbjct: 195 EKQLWKEQRVRRH-------ELSREDFLRAVWQWKHEKGGEIYEQLCALGASLDWDRECF 247

Query: 125 S---GWYSLRDEAY---YNDDEVYK 143
           +   G  +   EA+   YN   +Y+
Sbjct: 248 TMDAGSSAAVTEAFVRLYNSGLLYR 272



 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSAN 283
           ++  W  +     +  G+  + PD   A+F+P  L   G D+L F    +      L+  
Sbjct: 583 VLDTWFSSALFPFSALGWPRETPD--LARFYPLTLLETGSDLLMFWVGRMVMLGTQLTGQ 640

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           LP   KV  H  +   +G K+SKSLGNV+DP ++I
Sbjct: 641 LPF-SKVLLHSMVRDRQGRKMSKSLGNVLDPRDII 674


>gi|84029572|sp|Q8DGI7|SYI_THEEB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 953

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 35/268 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G              ADL++ G D  R  F +       +    P
Sbjct: 540 MDVWFDSGSSWAAVLGDQQ-----------ADLYLEGSDQHRGWFQSSLLTRVAVKGQAP 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K V +HGF+L  +G K+SKSLGNV DP EVIE           G D LR + V  +  
Sbjct: 589 Y-KAVLTHGFVLDEQGRKMSKSLGNVTDPREVIEGGKNQKQDPPYGADVLRLW-VSSVDY 646

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILS 392
             D    K+ L++   AD+   I N  +R +   L D++    MIP        D  +L 
Sbjct: 647 ANDVPIGKNILRQL--ADVYRKIRN-TARFLLGNLHDFEPEQDMIPY-AQLPALDRYMLH 702

Query: 393 VCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLY 449
               V  E+     +   +R     Q + +V   + Y D A+    +     DR  +   
Sbjct: 703 RLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDRLYISAATGDRRRSCQT 762

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V    ++ LA  +   +P LA  I+  L
Sbjct: 763 VLAIALQNLARAIAPVLPHLAEDIWQHL 790


>gi|54027498|ref|YP_121740.1| leucyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|60390673|sp|Q5YN65|SYL_NOCFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54019006|dbj|BAD60376.1| putative leucyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 950

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 13/129 (10%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR+HR+ G +VL   G D  G    + A 
Sbjct: 57  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYHRMRGRNVLHALGYDAFGLPAEQYAV 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   +   + N    +   D L + +D      TT+  ++   + ++ +I        
Sbjct: 117 QTGAHPRDTTESNIATMQRQLDRLGLGHDRRRSFATTDPEYYRWTQWIFLQI-------- 168

Query: 122 GCYSGWYSL 130
             Y+ WY L
Sbjct: 169 --YNAWYDL 175


>gi|307638077|gb|ADN80527.1| Isoleucyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996680|gb|ADZ52085.1| Isoleucyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998271|gb|ADZ50479.1| Isoleucyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGKKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVA 638


>gi|302805957|ref|XP_002984729.1| hypothetical protein SELMODRAFT_120741 [Selaginella moellendorffii]
 gi|300147711|gb|EFJ14374.1| hypothetical protein SELMODRAFT_120741 [Selaginella moellendorffii]
          Length = 848

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 16/115 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+  DP  ++  W  +     ++ G+ D+     A F+P  +   G DIL F    W A 
Sbjct: 482 KLQHDPD-VLDTWFSSGLFPFSSLGWPDS-TADYAAFYPTTVLETGHDILFF----WVAR 535

Query: 279 L------LSANLPLPKKVFSHGFI--LHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +      L+  LP  K V  HG +   HK  K+SKSLGNVIDP++VI  + +D L
Sbjct: 536 MVMLGTQLTGQLPF-KTVLLHGMVRDAHK-RKMSKSLGNVIDPLDVISGISLDDL 588


>gi|317131687|ref|YP_004091001.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469666|gb|ADU26270.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 925

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q +M VW D+   +         PD      WPAD+++ G D  R  F +    +     
Sbjct: 530 QDVMDVWFDSGVTHAAVLA--TRPD----LHWPADIYLEGNDQYRGWFQSSLLTSIAWKG 583

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P  K V +HG ++  +G K+SKSLGN I P +++++ G D LR ++ 
Sbjct: 584 VAPY-KMVITHGMVVDGEGRKMSKSLGNGIAPGDIVKKFGADILRLWVA 631


>gi|269966608|ref|ZP_06180689.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828793|gb|EEZ83046.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 942

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|256372097|ref|YP_003109921.1| leucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008681|gb|ACU54248.1| leucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 815

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 67/185 (36%), Gaps = 23/185 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H GH       D+  R+  + G  VL   G D  G     AA 
Sbjct: 32  RPKSYVLCMYPYPSGSAHQGHVRNYAFGDLNVRYRTMRGHAVLSPFGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK-----KISDKGD 118
             GV  ++F ++     +     L  +YD      E + HD   I W      K+ + G 
Sbjct: 92  KTGVHPRLFTEERIAELKASVKRLGTAYD---WRREIKSHDPSYIRWTQYLFLKLYEAGL 148

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            Y+       C      L +E    D    +  D      + N  QW      FF ++ Y
Sbjct: 149 AYQADAPVNWCPGCQTVLANEQVLPDGTCERSGD---VVVRRNLRQW------FFAITRY 199

Query: 173 QDKLL 177
            ++LL
Sbjct: 200 ANELL 204



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 11/94 (11%)

Query: 246 DNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLP-KKVFSHG 294
           D P D +  + W P D ++ G +    H +Y   F        L+ A L  P +++F+ G
Sbjct: 514 DRPFDIAAVEAWMPVDQYIGGIEHAILHLLYARFFTKALSDLGLIPATLREPFRQLFTQG 573

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            I   G K+SKS GN++ P +  + VG DALR +
Sbjct: 574 MIRFHGSKMSKSKGNLVTPQQYFDTVGADALRLY 607


>gi|255071133|ref|XP_002507648.1| predicted protein [Micromonas sp. RCC299]
 gi|226522923|gb|ACO68906.1| predicted protein [Micromonas sp. RCC299]
          Length = 1187

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 20/248 (8%)

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
            +N D  + K +PA+    G D  R    ++   +LS  L   P  + +  +G +L   G
Sbjct: 585 FENKDYFERKIFPANFVAEGLDQTR--GWFYTLMVLSTALFDRPAFQNLVCNGLVLASDG 642

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLAN 356
           +K+SKSL N  DP E++ + G DALR +L+       +    K+     + K V     N
Sbjct: 643 KKMSKSLKNYPDPNEILNKYGADALRLYLINSPVVRAEPLRFKEEGVFAVLKDVFLPWYN 702

Query: 357 GIGNLVS---RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               LV    R  S     ++            D  I S  + ++  ++  M N  ++  
Sbjct: 703 AYRFLVQNVRRIESETHMSFNPFASDQNGINVLDRWIASATTSLVTFVKNEMDNYRLYTV 762

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +  +++ + ++   +       +K  N      RA T LY    V+  L  ++  F P  
Sbjct: 763 VPHLVTFIGQLTNIYVRYNRSRIKGKNGVDDTRRALTALY---NVLLTLCKMMAPFTPFF 819

Query: 470 ANKIFDIL 477
           A K++  L
Sbjct: 820 AEKMYQNL 827


>gi|168483471|ref|ZP_02708423.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043056|gb|EDT51102.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 930

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPNLT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G +  +  G D HG  I +     GV  K   +
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMSGFNSPYIPGWDTHGLPIEQVLAKQGVKRK---E 114

Query: 75  QNSRNFRDMADVLDISY-----DDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
            N   +  +     +S      DDF R            T    ++  +I ++ ++++KG
Sbjct: 115 MNLVEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFGEMANKG 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IY+G    ++S   E+   + E+
Sbjct: 175 YIYRGAKPVYWSWSSESALAEAEI 198


>gi|145628101|ref|ZP_01783902.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979876|gb|EDJ89535.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 516

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 102 KVPD----TLDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHR--GWFMSSL 150

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 151 MLSTATNSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 210

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 211 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 263

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 264 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 296


>gi|22299873|ref|NP_683120.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22296058|dbj|BAC09882.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 981

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 35/268 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G              ADL++ G D  R  F +       +    P
Sbjct: 568 MDVWFDSGSSWAAVLGDQQ-----------ADLYLEGSDQHRGWFQSSLLTRVAVKGQAP 616

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K V +HGF+L  +G K+SKSLGNV DP EVIE           G D LR + V  +  
Sbjct: 617 Y-KAVLTHGFVLDEQGRKMSKSLGNVTDPREVIEGGKNQKQDPPYGADVLRLW-VSSVDY 674

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILS 392
             D    K+ L++   AD+   I N  +R +   L D++    MIP        D  +L 
Sbjct: 675 ANDVPIGKNILRQL--ADVYRKIRN-TARFLLGNLHDFEPEQDMIPY-AQLPALDRYMLH 730

Query: 393 VCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTVLY 449
               V  E+     +   +R     Q + +V   + Y D A+    +     DR  +   
Sbjct: 731 RLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDRLYISAATGDRRRSCQT 790

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V    ++ LA  +   +P LA  I+  L
Sbjct: 791 VLAIALQNLARAIAPVLPHLAEDIWQHL 818


>gi|83949881|ref|ZP_00958614.1| leucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837780|gb|EAP77076.1| leucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 860

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 10/180 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 28  EDRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A  +G   K +   N    +     L +S D   +F  T +  ++   + L+    +KG 
Sbjct: 88  AMASGGHPKDWTYGNIATMKKQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLEKGL 146

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +Y K     W  + D     +++V  G  G    A    V+  E   +FF++S Y  +LL
Sbjct: 147 VYRKNAVVNWDPV-DMTVLANEQVENG-RGWRSGAL---VERRELTQWFFKISDYSQELL 201


>gi|149641571|ref|XP_001511676.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 1272

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K +E   +     Y N  PHIGHA   I+ D+  RFH + G  V +  G D HG  I  K
Sbjct: 99  KSKEDFCLHDGPPYANGDPHIGHALNKILKDIANRFHMMRGSKVHYVPGWDCHGLPIELK 158

Query: 61  AAQNAGVTTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           A    G  T+      + + +R F   A     S   FIR       D C
Sbjct: 159 ALSEFGGDTQSLSPMEIREKAREFAKAAIAKQKSA--FIRWGVMADWDNC 206



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 133/341 (39%), Gaps = 65/341 (19%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDL-------SLSRKTFDWGIKIPDDPQY----- 226
           Y+++  EF+L  +    VI  V+    D+        L  K        PD  +Y     
Sbjct: 540 YHKTKDEFLLNSQTMEHVIKLVEQHGSDVWWTLPPEQLLPKEIVTQSGGPDGLEYVPGQD 599

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ +W D+ T++    G       SK     AD+++ GKD L   F +    +      +
Sbjct: 600 ILDIWFDSGTSWAHVLG------SSKI----ADVYMEGKDQLGGWFQSSLITSIATRKKV 649

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V  HGF L  KGEK+SKSLGNV+DP +VI   G D             KD  Y  
Sbjct: 650 PY-KTVVVHGFTLGEKGEKMSKSLGNVVDP-DVIINGGQDH-----------SKDPPYGA 696

Query: 344 DGLK-----KRVNADLANGIGNLVS---------RSVSMILKDYDGMIP-TPGAFTESDE 388
           D L+       V AD+  G  +L +          +V  +L +  G  P T    TE   
Sbjct: 697 DVLRWWVADSNVFADVTIGSASLAAAREDVNKLRNTVRFLLGNLAGFNPETESIPTEEMY 756

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            I      +LQ+      +  +     +   LV    R  DA      + + P  A+ V 
Sbjct: 757 VIDQFMLHLLQDFANKPADSHVRTTKRKDCKLVXXXXRVRDAS-----ETSVPGCATPVC 811

Query: 449 YVTVE-------VIRQLAILLQAFVPKLANKIFDILFVADE 482
           Y  +E        +R L   L  F P+  +   + ++V D+
Sbjct: 812 YPRIEREQLLRNTVRFLLGNLAGFNPETESIPTEEMYVIDQ 852


>gi|330718104|ref|ZP_08312704.1| methionyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 79

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF 47
          +E    YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F
Sbjct: 34 REDNTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGQDVYF 79


>gi|325066975|ref|ZP_08125648.1| valyl-tRNA synthetase [Actinomyces oris K20]
          Length = 938

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 14/148 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +  +    +G+L + D    + +P DL   G+DI+R   F  +   A L  A 
Sbjct: 555 IMDTWATSSLSPQLASGWLSDED-LFGRVYPMDLRPQGQDIIRTWLFTTVV-RANLEFAA 612

Query: 284 LPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           LP      S G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D  
Sbjct: 613 LPWTNAGLS-GWILDSDHK--KMSKSKGNVVTPMGLLEQYGSDAVRYW-ASSARLGLDAA 668

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +++  +K  +   LA  + N    ++SM
Sbjct: 669 FEETQIK--IGRRLAIKVLNASKFALSM 694



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H+GH +     D +ARF R+ G  V +  G D++G    +  QN
Sbjct: 77  HVGHVFSYTHTDTVARFQRMRGKAVFYPMGWDDNGLPTERRVQN 120


>gi|312884628|ref|ZP_07744331.1| valyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367720|gb|EFP95269.1| valyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 952

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 123/328 (37%), Gaps = 66/328 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ +N D  K  F P+D+ V G DI+ F    W A ++   +  
Sbjct: 472 VLDTWFSSALWTFGTQGWPENTDDLKT-FHPSDVLVTGFDIIFF----WVARMIMMTMHF 526

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEV------------------ 316
                    +P K V+  G I    G+K+SKS GNV+DPI++                  
Sbjct: 527 CKDDNGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLEALVQKRTGNMM 586

Query: 317 -------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                              IE  G DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 587 QPKLAAKIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNK 644

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +D D G       F+ +D+ I S      +E   ++ N  +  A   
Sbjct: 645 LWN-ASRYVLMNTEDQDCGFGDNSIEFSLADKWIESQFELAAKEFNGHIDNFRLDMAANT 703

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   +     D Y +  KP  L K N  +        + V+ +   L    +P +   I+
Sbjct: 704 IYEFIWNQFCDWYLELTKP-VLWKGNEAQQRGTRRTLITVLEKTLRLAHPVIPYITETIW 762

Query: 475 D-----ILFVADENRCFQSLDQRLKPGF 497
                 I  +  E    Q+L Q  +  F
Sbjct: 763 QSVKPLIKGIEGETIMLQALPQYNEANF 790


>gi|294789095|ref|ZP_06754334.1| valine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482836|gb|EFG30524.1| valine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 946

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 12/107 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     TT G+ D  P+    K F P+++ V G +I+ F    W A ++    
Sbjct: 475 VLDTWFSSALVPFTTLGWKDGEPETESMKAFIPSNVLVTGYEIIFF----WVARMIMMTT 530

Query: 285 PLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            +  KV     + HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 HIVGKVPFRDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDNL 577



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   I D LAR++R+ G +  +  GTD           +AG+ T++ V++
Sbjct: 48 HMGHAFNQTIMDGLARYYRMKGYNTCWIPGTD-----------HAGIATQIVVER 91


>gi|257063414|ref|YP_003143086.1| leucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791067|gb|ACV21737.1| leucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 852

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 38/90 (42%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+   H+GHA    I DV AR+  + G DVL   G D  G     AA
Sbjct: 30  DRPKKYVLEMFPYPSGDIHMGHARNYTIGDVTARYATMRGFDVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                   V+  QN    +     +  SYD
Sbjct: 90  IKRNSHPAVWTYQNIDTQKASFKRMGFSYD 119



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 40/252 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFIL-H 298
           D +KA  W P D ++ G +    H +Y   F        +L+ + P  K +   G +L  
Sbjct: 543 DPAKANAWLPVDQYIGGIEHAILHLLYSRFFTKVLRDCGMLNFDEPF-KNLLCQGMVLDS 601

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+ +SKS GNV+ P  +I+  G DA+R +++      K+  +++DGL          G+
Sbjct: 602 NGDVMSKSKGNVVSPEVMIDSYGADAVRAYILFMAPPDKELLWNEDGLA---------GL 652

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCS-------RVLQEIRENMQNQL 409
              ++R+   I+ D  G       F E  + + I +  +       RV+ ++  + +   
Sbjct: 653 YKFLNRAWR-IVNDLVGCADENTYFQEAGTQQQIEAAAAKLKRERHRVVGKVAADFERNN 711

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A++ ++ L +    Y        L+ T  D     L  T EV   L +L+    P  
Sbjct: 712 FNTAISAIMELCNAATDY--------LRITPADARDAAL--TAEVAEVLVLLMAPITPHW 761

Query: 470 ANKIFDILFVAD 481
           A +++  +   D
Sbjct: 762 AQELWVTVLGKD 773


>gi|210135584|ref|YP_002302023.1| isoleucyl-tRNA synthetase [Helicobacter pylori P12]
 gi|254782409|sp|B6JNR5|SYI_HELP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|210133552|gb|ACJ08543.1| isoleucyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 48/245 (19%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY+   + W+ L DE +  +D    G+         N ++ +E     F  ++ +++L +
Sbjct: 409 IYRAT-TQWFILMDEPFIQND----GSQKTLREVALNAIEKVE-----FVPNSGKNRLKT 458

Query: 179 YYESHPEFILP------------IERRNEVISFVKSGLKDLS--LSRKTFD--WGIKIPD 222
             E+ P++ L             I++R     F    L+ ++    +K  D  W   + D
Sbjct: 459 MIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHVANLFEKKGCDVWWEYSVKD 518

Query: 223 --DPQY------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              P Y            I+ VW D+ + +      L++  G K +  P+D+ + G D  
Sbjct: 519 LLPPSYQEDAMHYEKVMHILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQH 574

Query: 269 R--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +
Sbjct: 575 RGWFQSSLLIGCILNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVV 633

Query: 326 RYFLV 330
           R ++ 
Sbjct: 634 RLWVA 638


>gi|85680332|gb|ABC72361.1| valyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 932

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-----WPADLHVIGKDILRF---H 271
           IP+D   +   W  +    L   G+  N +    +F     +P +L   G DI+ F   H
Sbjct: 497 IPEDD--VFDTWATSSLTPLINAGWDWNDNTETIEFGDSGLYPFNLRPQGHDIISFWLFH 554

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +  +  +P    V  +G +L +  EK+SKS GNVI P EVI E  VDA RY+  
Sbjct: 555 TVV-KCYEHTGEVPF-DSVMINGMVLDENREKMSKSKGNVIAPDEVITEYPVDAARYWAA 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              A G D  Y + G+  R    L   + N      S +++D     P P   + +D
Sbjct: 613 GS-AVGDDLPYSEKGI--RAGEKLLRKLWN-----ASKLVEDLTTDAPDPETMSHAD 661



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H GH Y   + D +ARF R+ G DV F  G D++G    + A++
Sbjct: 90  HWGHVYGFTLQDFVARFRRMRGSDVFFPFGYDDNGIASERLAED 133


>gi|123784130|sp|Q3U2A8|SYVM_MOUSE RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|74206841|dbj|BAE33234.1| unnamed protein product [Mus musculus]
          Length = 1060

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 23/145 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D  G      A  A V
Sbjct: 140 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWIPGSDHAG-----IATQAVV 194

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG---DIYKGCY 124
             +++ +Q  R         ++S +DF+R   +  H+    +++++   G   D  + C+
Sbjct: 195 EKQLWKEQRVRRH-------ELSREDFLRAVWQWKHEKGGEIYEQLCALGASLDWDRECF 247

Query: 125 S---GWYSLRDEAY---YNDDEVYK 143
           +   G  +   EA+   YN   +Y+
Sbjct: 248 TMDAGSSAAVTEAFVRLYNSGLLYR 272



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSAN 283
           ++  W  +     +  G+  + PD   A F+P  L   G D+L F    +      L+  
Sbjct: 583 VLDTWFSSALFPFSALGWPRETPD--LAHFYPLTLLETGSDLLMFWVGRMVMLGTQLTGQ 640

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
           LP   KV  H  +   +G K+SKSLGNV+DP ++I
Sbjct: 641 LPF-SKVLLHSMVRDRQGRKMSKSLGNVLDPRDII 674


>gi|71755079|ref|XP_828454.1| leucyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70833840|gb|EAN79342.1| leucyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 1074

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 18/93 (19%)

Query: 255 FWPADLHVIGKDILRFH--------AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           ++P DL   GKD+++ H        A  WP          P+ VF++G +L   EK+SKS
Sbjct: 676 WYPVDLRCSGKDLIQNHLTMFLYNHAAIWP----DDESKWPRSVFANGHVLVDNEKMSKS 731

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            GN +   E I E G DA R      +AC   G
Sbjct: 732 KGNFMTLEEAINEYGSDATR------LACADAG 758


>gi|158334219|ref|YP_001515391.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082976|sp|B0C1R1|SYL_ACAM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158304460|gb|ABW26077.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 855

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHVGHTRNYVITDVIARLKRMQGYRVLQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G+    +   N    +   + L +S D
Sbjct: 92  ARGIHPAEWTYANMAQMKKQLEPLGLSID 120


>gi|57157211|dbj|BAD83635.1| valyl tRNA synthetase [Trypanosoma cruzi]
          Length = 595

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 12/109 (11%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+  + D    KF+P +L   G DIL F    W A ++  
Sbjct: 430 DPD-VLDTWFSSAMWPYSTLGWPGDTD-DMHKFFPGNLMETGHDILFF----WVARMVMT 483

Query: 283 NLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           +L    K     VF H  +  K GEK+SKS GNVIDP+ +I  + ++ L
Sbjct: 484 SLHFTGKLPFSEVFLHAMVRDKNGEKMSKSKGNVIDPLFIINGITLEGL 532



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 14/77 (18%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
          H+GH+    + D L RFHR+ G + L+  GTD           +AG+ T+V V++  R  
Sbjct: 3  HLGHSLTGAVQDTLIRFHRMKGDNTLYVPGTD-----------HAGIATQVVVEK--RLL 49

Query: 81 RDMADVL-DISYDDFIR 96
          R+      D+  ++F++
Sbjct: 50 RESGKTRHDLGREEFLK 66


>gi|58038885|ref|YP_190849.1| leucyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819158|sp|Q5FTV3|SYL_GLUOX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58001299|gb|AAW60193.1| Leucyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 865

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 37/90 (41%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  V+   G D  G     AA
Sbjct: 37  DRPKYYVLEMFPYPSGQLHVGHVRNYTLGDVVARYKRARGFAVMHPMGWDAFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           +   V    +   N    R     L  S D
Sbjct: 97  RERNVHPGKWTMDNIATMRGTLQRLGFSLD 126


>gi|33519593|ref|NP_878425.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666677|sp|Q7VQL0|SYI_BLOFL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33517256|emb|CAD83639.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 953

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 20/168 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++   +     Y N   H+GHA   I+ D++ +F  L G D  +  G D HG  I    
Sbjct: 47  EKKLFLLHDGPPYANGFIHLGHAVNKILKDIIIKFKGLSGYDAPYIPGWDCHGLPIELQV 106

Query: 63  QNAGVTTKVFVDQNSRNFRD-----MADVLDISYDDFIR-------------TTEKRHHD 104
           +       + +D NS+ FR+     +   ++I   DFIR                K   +
Sbjct: 107 EKLIKKVNMDIDINSQEFRNYCREYVKKQIEIQKKDFIRLGILGEWKNPYLTMDYKTEAN 166

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             R L K IS+ G  YKG    ++  +  +   + EV +  D  Y NA
Sbjct: 167 IIRTLGKIISN-GYFYKGIKPVYWCFQCHSALANSEV-EYNDYHYSNA 212



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V SHGF +  KG K+SKSLGN+I P++++ + G D LR ++       KD     D L
Sbjct: 599 KQVLSHGFTIDDKGNKMSKSLGNIIRPLDIVNKFGSDILRLWVASS-DYSKDMVISDDVL 657

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIREN 404
           K     D+   I N +   ++ I  D+D    +         D+  ++    V  +I  N
Sbjct: 658 KNV--TDIYRRIRNTIRFFLANI-NDFDPEKDLVQSNRMVALDQWAINHTLSVQVKIISN 714

Query: 405 MQNQLIHRALAQVISLVS-EVDR-YFDAQKP--WELKKTNPDRAS--TVLYVTVE-VIRQ 457
            +    H  +  ++   S E+   Y D  K   + L K +  R S  T LY  +E ++R 
Sbjct: 715 YEQYKFHNVIRYIMKFCSIEMGSFYLDVVKDRLYTLNKDSLARRSCQTALYHIIESMVRW 774

Query: 458 LAILLQ-------AFVPKLANKI------FDILFVADENRCFQS 488
           +A +L         ++P   +K       +D LF  DEN+   S
Sbjct: 775 IAPILSFTADEIWKYIPGNRSKYVFTEEWYDRLFKIDENQIVNS 818


>gi|313815390|gb|EFS53104.1| isoleucine--tRNA ligase [Propionibacterium acnes HL059PA1]
          Length = 1107

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 61/292 (20%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGTDALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G ++  +AD A G G+          
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQQ--DADPARGSGD---------S 730

Query: 371 KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + G++P   A T+    D  ++S  + ++++I E + N    R    +   V E+  +
Sbjct: 731 RGFGGVVPP--AVTQRHVLDRWLVSATNVLVRDITEALNNFDTQRVGNLIAQFVDELSNW 788

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 789 YVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 836


>gi|310828622|ref|YP_003960979.1| leucine--tRNA ligase [Eubacterium limosum KIST612]
 gi|308740356|gb|ADO38016.1| leucine--tRNA ligase [Eubacterium limosum KIST612]
          Length = 803

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 15/102 (14%)

Query: 244 YLDN------PDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPK 288
           Y DN       D  K K+W P D +  G + +  H +Y   W  FL    +     P  K
Sbjct: 508 YFDNKNDQALADYDKMKYWMPVDWYNGGMEHVTRHLLYSRFWHKFLYDIGVVPTAEPYKK 567

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +      +   GEK+SKS GNV++P ++I+E G D LR +++
Sbjct: 568 RTMQGLILGSDGEKMSKSKGNVVNPNDIIDEYGADTLRTYVM 609



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 9/180 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+ A  H+GH       ++++R  R++G +VLF  G D  G      
Sbjct: 30  DKEKFYGLVEFPYPSGAGLHVGHVRAYTSLEIISRKRRMEGFNVLFPIGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   D+N + F      +  S+  D  I TT+  +    + ++ ++   G +
Sbjct: 90  AIKTGRHPREVTDENIKVFTQQLKSIGYSFDWDCEIDTTDPNYFKWTQWIFLQLFKHGLV 149

Query: 120 YKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y+   Y  + S       N+D      +G+        VQ +E++ +F ++  Y +KLL+
Sbjct: 150 YRDRTYVNFCSGCKVVLANED----FREGKCSICGSEVVQ-LEKDVWFLKIREYAEKLLA 204


>gi|300121379|emb|CBK21759.2| Leucyl-tRNA synthetase [Blastocystis hominis]
          Length = 840

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  Y+     YP+ + H+GH     I+D ++R+  ++G +V+   G D  G     A
Sbjct: 29  EEAKNCYVLPMFPYPSGKMHMGHVRVFSISDCISRYKAMNGYNVIHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   ++   N    R     L+   ++D  + T+   ++   + L+ K+ +KG +
Sbjct: 89  AIERNIPPDIWTKNNVEEMRKQISGLNFRFNWDREVNTSTPEYYKWTQWLFLKLWEKGYV 148

Query: 120 YK 121
            +
Sbjct: 149 TR 150


>gi|294660370|ref|NP_853101.2| Isoleucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286865|sp|Q7NBG0|SYI_MYCGA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|284812028|gb|AAP56669.2| Isoleucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930577|gb|ADC30516.1| Isoleucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 897

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 16/105 (15%)

Query: 227 IMYVWIDALT--NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+ T  N L   G  D           A ++  G D  R  F++    A +L+ 
Sbjct: 524 ILDVWFDSGTSFNVLKENGIKD----------KATIYFEGSDQYRGWFNSSMICATVLNK 573

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
             P  K++ SHGF L  KG K+SKS GNVI P+ +I+  G D LR
Sbjct: 574 TAPY-KELISHGFTLDEKGMKMSKSQGNVISPLTIIKNKGADILR 617


>gi|269859599|ref|XP_002649524.1| leucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511635|sp|B7XHP6|SYLC_ENTBH RecName: Full=Probable leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|220067075|gb|EED44543.1| leucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 860

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 13/88 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           F+P DL V GKD++  H I    F L  ++ +      PK+++++G +L  G K+SKS G
Sbjct: 503 FYPIDLRVSGKDLINNHLI----FFLMNHVAIFKENNWPKRIYTNGHLLLNGLKMSKSEG 558

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACG 336
           N +     +E  G  A R  L     CG
Sbjct: 559 NFLSVDTALERFGTSATRMCLA---ICG 583



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 34/61 (55%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          +++K +I+    Y N + H+GH + +  AD+ + +  + G +VLF  G    G  I+ +A
Sbjct: 30 DKKKFFITFPYPYMNGKLHLGHLFSISKADIFSYYKEMQGFNVLFPFGFHCTGMPISASA 89

Query: 63 Q 63
          +
Sbjct: 90 K 90


>gi|28199117|ref|NP_779431.1| leucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28057215|gb|AAO29080.1| leucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 887

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 43  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  Y 
Sbjct: 103 KNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 162

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 163 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 214



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 595 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 641

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 642 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 671


>gi|327439174|dbj|BAK15539.1| leucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 804

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 9/179 (5%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       D+L+RF R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   F+   + L  SY  D  I TT+  ++   + ++ K+ +    
Sbjct: 89  ALDTGNDPAEFTAKNIATFKRQINELGFSYDWDREINTTDPSYYKWTQWIFTKLVEMDLA 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y       W         N++ +    DG      H PV       +  R++ Y D+L+
Sbjct: 149 YVDEVAVNWCEALGTVLANEEVI----DGVSERGGH-PVVRRPMRQWVLRITKYADRLV 202



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 30/153 (19%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG-EKIS 304
           K W P D+++ G +    H +Y   W   L    L   K    K+F+ G IL +G EK+S
Sbjct: 519 KHWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGLVHTKEPFQKLFNQGMILGEGNEKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGF---------------YDK 343
           KS GNV++P ++I   G D LR +      L   +A   +G                 D+
Sbjct: 579 KSKGNVVNPDDIIVSHGADTLRLYEMFMGPLEASVAWSTNGLDGARRFLDRIWRLFVTDE 638

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
             L  +V       +  +  ++V  + +DY+G+
Sbjct: 639 GKLAAKVQDSADTTLEKVYHQTVKKVTEDYEGI 671


>gi|325848747|ref|ZP_08170257.1| isoleucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480391|gb|EGC83453.1| isoleucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 1036

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    ++ VW D+     +   Y          ++PAD    G D  R  F+++   
Sbjct: 513 RVPD----VIDVWFDSGAMPFSQVHYPFEKGEDLDDYFPADFICEGIDQTRGWFYSLMAI 568

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +++   P  K V  +  ++ K G+K+SKS GN ++P E+ ++ G DA+R++ +    C
Sbjct: 569 STIITGKAPY-KNVLVNDLVVDKNGQKMSKSKGNTLNPFELFDKYGADAVRFYSLYVSPC 627

Query: 336 GKDGFYDKDGL 346
                +D+ GL
Sbjct: 628 WVPTKFDEKGL 638


>gi|317010209|gb|ADU80789.1| isoleucyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 48/245 (19%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY+   + W+ L DE +  +D    G+         N ++ +E     F  ++ +++L +
Sbjct: 409 IYRAT-TQWFILMDEPFIQND----GSQKTLREVALNAIEKVE-----FVPNSGKNRLKT 458

Query: 179 YYESHPEFILP------------IERRNEVISFVKSGLKDLS--LSRKTFD--WGIKIPD 222
             E+ P++ L             I++R     F    L+ ++    +K  D  W   + D
Sbjct: 459 MIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHVANLFEKKGCDVWWEYSVKD 518

Query: 223 --DPQY------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              P Y            I+ VW D+ + +      L++  G K +  P+D+ + G D  
Sbjct: 519 LLPPSYQEDATHYEKVMHILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQH 574

Query: 269 R--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           R  F +      +L+   P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +
Sbjct: 575 RGWFQSSLLIGCILNNQAPF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVV 633

Query: 326 RYFLV 330
           R ++ 
Sbjct: 634 RLWVA 638


>gi|323343658|ref|ZP_08083885.1| leucine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095477|gb|EFZ38051.1| leucine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 950

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I  D+ AR+ R  G +VL   G D +G    +
Sbjct: 28  KTKKKFYVLNMFPYPSGAGLHVGHPLGYIATDIYARYKRQKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G    V   +N   +R+  D +   +D
Sbjct: 88  YAIQTGQHPAVTTAKNIARYREQLDKIGFCFD 119



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 43/228 (18%), Positives = 102/228 (44%), Gaps = 35/228 (15%)

Query: 259 DLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           D++++  D+L   A   W     +A   L    ++ G+ +   EK+SKS+ NV++P  ++
Sbjct: 680 DVNIVHGDVLDIDAFKAWRPEYNNAGFVLQDGKYTCGWAI---EKMSKSMFNVVNPDMIV 736

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D LR + +      +   +D +G+         +G    + +  ++   +  G+ 
Sbjct: 737 EKYGADTLRLYEMFLGPIEQSKPWDTNGI---------DGCHRFLKKFWALFYDNRTGVF 787

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
              G     D   L    ++++++  +++N   + A++  +  V+E+     AQ+    +
Sbjct: 788 LVNGDVPTKDA--LKSVHKLIKKVSSDIENFSYNTAVSAFMICVNEL-----AQQNCHSR 840

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                          E++++L +L+  F P +A ++++IL     + C
Sbjct: 841 ---------------ELLQKLVVLIAPFAPHIAEELWEILGNTSTSVC 873


>gi|307353953|ref|YP_003895004.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157186|gb|ADN36566.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 922

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 16/103 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF-----TTGTDEHG-- 55
           E +K Y++ A  YP+   H+GH    I+ DV+AR++R+ G  VLF      TGT   G  
Sbjct: 22  EADKFYVNVAYPYPSGAMHVGHGRTYIVPDVIARYYRMRGKHVLFPMAFHVTGTPVIGIS 81

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
           ++IA   +    T K++ D     +R   DVL+  +  D+ +R
Sbjct: 82  RRIANGDEK---TIKLYRDL----YRVPEDVLEKFVDPDEIVR 117



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D     KD++  H  +   F   A  P    P+ +   G  L +G K+S S GNVI
Sbjct: 554 WYPYDFRFSAKDLISNHLTF-QLFHHKALFPKELQPRGMVVFGMGLLEGAKMSSSKGNVI 612

Query: 312 DPIEVIEEVGVDALRYFLV 330
              + +EEVG D +R FLV
Sbjct: 613 LLEDAVEEVGADTVRMFLV 631


>gi|300709408|ref|YP_003735222.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123091|gb|ADJ13430.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 10/109 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D  +A  W P D +V G +    H +Y   F         L    P  + + + G +  +
Sbjct: 513 DRERANDWMPVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPF-RNLLAQGMVQLE 571

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           GEK+SKS GN + P  ++EE G D  R F+++     +D  + ++G++ 
Sbjct: 572 GEKMSKSKGNTVSPQRIVEEYGADTARLFMMQAAQPERDFDWSEEGVRS 620



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 4/172 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ R+ G +VL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMTGDEVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        R     +   Y  D  I T    ++   + L+++  ++G + +    
Sbjct: 96  NPRDWTMDCIETMRGQMKSMGFGYDWDREITTCTPEYYKWNQWLFERFHEEGLVERRDAE 155

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             +    E    D++V +G D   +     PV   E E +F  ++ Y D+LL
Sbjct: 156 VNWCPNCETVLADEQV-EGEDELCWRC-GTPVVQRELEQWFLSITEYADELL 205


>gi|216263468|ref|ZP_03435463.1| valyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980312|gb|EEC21133.1| valyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 875

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G +   DP  ++  W  +     ++ G+ +  D  K  ++P +  +   DI+ F    W 
Sbjct: 439 GKRFVQDPD-VLDTWFSSWLWPFSSLGWPNVTDDFK-NYYPTNTLITAYDIIFF----WV 492

Query: 277 AFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + ++ A L    ++ F   +I       +G+K+SKSLGN IDP+++I E G D+L + L 
Sbjct: 493 SRMVMAGLEFTGQIPFKDVYITPLLRDKQGKKMSKSLGNGIDPLDIIHEYGSDSLHFTLS 552

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G+D   D       + A  AN + N    S  ++L   +  I     F + D+ +
Sbjct: 553 FLSVQGQDLNIDSKDF--MLGAKFANKVFN---ASKFILLNIKNRKILNDLEFNDIDKWL 607

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           L+  +  +  +  +  N   + A   V         D Y +  K  +L   N D  +  +
Sbjct: 608 LTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDWYIEISKI-DLNSENVDIQNMAI 666

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
              +  +++  ++L  F+P +  KI+
Sbjct: 667 SKLLFFLKKALLILHPFIPFVTEKIY 692



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 25/152 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----------QKIAKAA---QNAG 66
           H+GHA   ++ D+L R+ R+   + L+  GTD  G           + I K+    +   
Sbjct: 52  HMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFERHLKNIGKSKNDYEREE 111

Query: 67  VTTKVF--VDQNSRNFRDMADVLDISYDDFIRTTEKRHHD--TCRILWKKISD---KGDI 119
           +  ++F   D++     +    L  SYD    T E+   D   C+ + K   D   KG I
Sbjct: 112 LVQEIFKLKDKHRGVIVNQIKKLGASYD---HTRERFTLDDSLCKAVNKVFKDLYSKGLI 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           Y+G Y         +  +D+E+ YK  DG+ Y
Sbjct: 169 YRGEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|110667028|ref|YP_656839.1| valyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109624775|emb|CAJ51181.1| valine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 930

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-----WPADLHVIGKDILRF---H 271
           IP+D   +   W  +    L   G+  N +    +F     +P +L   G DI+ F   H
Sbjct: 495 IPEDD--VFDTWATSSLTPLINAGWDWNDNTETIEFGDSGLYPFNLRPQGHDIISFWLFH 552

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +  +  +P    V  +G +L +  EK+SKS GNVI P EVI E  VDA RY+  
Sbjct: 553 TVV-KCYEHTGEVPF-DSVMINGMVLDENREKMSKSKGNVIAPDEVITEYPVDAARYWAA 610

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              A G D  Y + G+  R    L   + N      S +++D     P P   + +D
Sbjct: 611 GS-AVGDDLPYSEKGI--RAGEKLLRKLWN-----ASKLVEDLTTDAPDPETMSHAD 659



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H GH Y   + D +ARF R+ G DV F  G D++G    + A++
Sbjct: 88  HWGHVYGFTLQDFVARFKRMRGSDVFFPFGYDDNGIASERLAED 131


>gi|157803518|ref|YP_001492067.1| isoleucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166229764|sp|A8EY49|SYI_RICCK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157784781|gb|ABV73282.1| isoleucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 1079

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 47/245 (19%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVI 311
           +PAD   I + + +    ++   +LS  L   P       HG IL   G+K+SK L N  
Sbjct: 563 FPADF--IVEYVAQTRGWFYTLMVLSTALFDRPPFLNCICHGVILDTTGQKLSKRLNNYA 620

Query: 312 DPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG--------------------LKKRV 350
           DP+E+ ++ G DALR   L   +  G++   DKDG                         
Sbjct: 621 DPLELFDKYGSDALRITMLSSNVVKGQELLIDKDGKMVFDTLRLFIKPIWNAYHFFTMYA 680

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           NAD   G  +  S +V  I                    ILS     +Q+I +++ N   
Sbjct: 681 NADSLKGKSDFASENVLDIY-------------------ILSKLKIAVQKIEKSLDNFDT 721

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKL 469
             A  QV      ++ ++  +      K+  D      Y T+   +  +AI + A VP +
Sbjct: 722 QAAYHQVSEFFEVLNNWYIRRSRARFWKSEKDADKQNAYNTLYSCLETMAIAMSALVPMI 781

Query: 470 ANKIF 474
           +  I+
Sbjct: 782 SEAIY 786


>gi|331002911|ref|ZP_08326424.1| leucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413204|gb|EGG92578.1| leucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 804

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 43/233 (18%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKIS 304
           K+ P D+++ G +    H +Y   +  FL     +  + P   K+F+ G I    G+K+S
Sbjct: 523 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLNDIGVVEFDEPF-TKLFNQGMINGSDGQKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G DALR + +       D  +D  G++         G+   +++
Sbjct: 582 KSKGNVVSPDDLVRDYGCDALRLYELFVGPPELDADWDDRGIE---------GVARFLNK 632

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              +++ + D  +       E+D  +L V + ++ +I +      ++  +A  +   +++
Sbjct: 633 FYKLVMDNKDKNV-------EADRELLRVRANLISDIEQRFNAFSLNTVIAGFMEYNNKL 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       KKT  D+         E ++   ILL  F P +  ++++ L
Sbjct: 686 IELG--------KKTGVDK---------ETLKAFTILLAPFAPHIGEELWEEL 721



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 15/183 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQVLKGNYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGV----TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV    +T   V    R   ++A + D  +D  + TT+   +   + ++ ++  KG
Sbjct: 88  AIKMGVHPAKSTAENVANIKRQINEIAAIYD--WDREVNTTDPAFYKWTQWIFVQMFKKG 145

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDK 175
             Y+  +   +    +    ++EV  G   +   A  + N  QWM       +++AY D+
Sbjct: 146 LAYEKEFPINWCPSCKTGLANEEVVDGKCERCGTAVTKKNLRQWM------LKITAYADR 199

Query: 176 LLS 178
           LL+
Sbjct: 200 LLN 202


>gi|315635999|ref|ZP_07891259.1| valine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479720|gb|EFU70393.1| valine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 871

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L + G DI+ F    W A ++         LP  K ++ H  +  + G K+SKS 
Sbjct: 483 FYPNSLLITGFDIMFF----WVARMMMMGEHFRGELPF-KDIYMHALVRDEHGAKMSKSK 537

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP++++EE   D +R+ L      G+D
Sbjct: 538 GNVIDPLDMVEEHSADIIRFTLAYLAVQGRD 568



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK 70
           HIGHA    + D++ R+ R+DG   L+  GTD  G   Q + +    A  TTK
Sbjct: 53  HIGHALTFTLQDIITRYKRMDGFKTLWQPGTDHAGIATQNVVEKQLLAEGTTK 105


>gi|92115038|ref|YP_574966.1| valyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|91798128|gb|ABE60267.1| valyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 947

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 10/77 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILH-KGEKISKSLG 308
           F P+ + V G DI+     +W A ++   L        KKV+ HG +   +G+K+SKS G
Sbjct: 497 FHPSSVLVTGFDII----FFWVARMIMMTLKFTGEVPFKKVYVHGLVRDAQGQKMSKSKG 552

Query: 309 NVIDPIEVIEEVGVDAL 325
           NV+DPI++I+ + +DAL
Sbjct: 553 NVLDPIDLIDGIDLDAL 569


>gi|327469020|gb|EGF14492.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 930

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G L N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVLVNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHAMNHISKDIIIRSKSMTGFYAPYIPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+ + L + ++  +    K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLVEYLKLCHEYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|325690192|gb|EGD32196.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 930

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTISPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTSDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|313205325|ref|YP_004043982.1| valyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444641|gb|ADQ80997.1| valyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 878

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 33/247 (13%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP+  + K++ P +  V   +IL F    W A ++ A       +P  K V+  G + 
Sbjct: 471 INNPENEEIKYYYPTNDLVTAPEILFF----WVARMIIAGYEYRGEMPF-KNVYLTGIVR 525

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            K G K+SKSLGN  DP+++I + G DA+R  ++     G D  YD    ++  N    N
Sbjct: 526 DKLGRKMSKSLGNSPDPLDLIAQYGADAVRLGMLLTSPAGNDLPYDDSLCEQGRN--FNN 583

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         + D    I  P +   + +   +  ++ L EI +      +  AL  
Sbjct: 584 KIWNAFRLVKGWEVAD----IEQPESARMAVKWFEAQLNKTLLEIEDLFSKYRLSEALMA 639

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP------DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           V  L      ++D    W L+   P      DR  T    T+     L  +L  F+P + 
Sbjct: 640 VYKL------FWDEFSSWYLEMAKPAYQKPIDR--TTYEATLGFFDSLLKVLHPFMPFIT 691

Query: 471 NKIFDIL 477
            +++  L
Sbjct: 692 EELWQAL 698


>gi|153871711|ref|ZP_02000815.1| Isoleucyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
 gi|152071825|gb|EDN69187.1| Isoleucyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
          Length = 638

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 3/68 (4%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +   LP  K V +HGF +  KG K+SKSLGNVI P
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTSVAMRGGLPPYKGVLTHGFTVDAKGRKMSKSLGNVIAP 630

Query: 314 IEVIEEVG 321
            +VI+  G
Sbjct: 631 QKVIKPWG 638



 Score = 36.6 bits (83), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 59  YANGDIHIGHAVNKILKDIIIKARTLSGFDAPYVPGWDCHGLPI 102


>gi|312129368|ref|YP_003996708.1| leucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311905914|gb|ADQ16355.1| leucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 934

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y+     YP+ A  H+GH    I +D+ +RF RL G +VL   G D  G    +
Sbjct: 29  KSKPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLKGFNVLHPMGFDSFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
            A   G    +  ++N   +      +  SYD    +RT+E  ++   + ++ +I
Sbjct: 89  YAIQTGQHPAITTEKNINTYIAQLKNIGFSYDWSREVRTSEPDYYKWTQWIFCQI 143


>gi|269125944|ref|YP_003299314.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermomonospora curvata DSM 43183]
 gi|268310902|gb|ACY97276.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermomonospora curvata DSM 43183]
          Length = 846

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 98/237 (41%), Gaps = 23/237 (9%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PE +LPI+  ++V              R   D  I  PD    +M  W  +        G
Sbjct: 470 PEEMLPIDPSSDVPPGYSED------QRGKPDGFIGDPD----VMDTWATSSLTPQVAGG 519

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +  +PD   A+ +P DL   G DI+R    +    + L   +LP      S   +    +
Sbjct: 520 WESDPD-LFARVFPYDLRPQGHDIIRTWLFSTVLRSHLEHDSLPWRNAALSGWILDPDRK 578

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI P+ ++ E G DA+RY+       G D  ++   +K  V   LA  I N 
Sbjct: 579 KMSKSKGNVITPMGLLVEHGSDAVRYWAA-SARPGTDTAFEVKQIK--VGRRLATKILN- 634

Query: 362 VSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            SR V  +     G +    A TE  D S+L+    V+ E  E        RAL + 
Sbjct: 635 ASRFVLGL-----GEVAPDAAITEPVDLSMLAALREVVAEATEAFDGYDHARALERT 686



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + RE+++ I T     +   H+GH +     D +AR+ R+ G  V +  G D++G    +
Sbjct: 39  RPREEIFAIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMRGRAVFYPMGWDDNGLPTER 98

Query: 61  AAQN 64
             QN
Sbjct: 99  RVQN 102


>gi|85372673|gb|ABC70128.1| valyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 932

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-----WPADLHVIGKDILRF---H 271
           IP+D   +   W  +    L   G+  N +    +F     +P +L   G DI+ F   H
Sbjct: 497 IPEDD--VFDTWATSSLTPLINAGWDWNDNTETIEFGDSGLYPFNLRPQGHDIISFWLFH 554

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +  +  +P    V  +G +L +  EK+SKS GNVI P EVI E  VDA RY+  
Sbjct: 555 TVV-KCYEHTGEVPF-DSVMINGMVLDENREKMSKSKGNVIAPDEVITEYPVDAARYWAA 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              A G D  Y + G+  R    L   + N      S +++D     P P   + +D
Sbjct: 613 GS-AVGDDLPYSEKGI--RAGEKLLRKLWN-----ASKLVEDLTTDAPDPETMSHAD 661



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H GH Y   + D +ARF R+ G DV F  G D++G    + A++
Sbjct: 90  HWGHVYGFTLQDFVARFRRMRGSDVFFPFGYDDNGIASERLAED 133


>gi|56751678|ref|YP_172379.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301246|ref|YP_401454.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820600|sp|Q5N1G1|SYI_SYNP6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56686637|dbj|BAD79859.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170127|gb|ABB58467.1| Isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 954

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++             +   +PADL++ G D  R  F +    +   + + P
Sbjct: 535 MDVWFDSGSSWAAVASQ------REGLHYPADLYLEGSDQHRGWFQSSLLTSVACNGHAP 588

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
             ++V +HGF L  KG K+SKSLGNV+DP  VI            G D LR ++
Sbjct: 589 Y-RRVLTHGFALDEKGRKMSKSLGNVVDPAIVINGGKDQKQEPPYGADVLRLWV 641


>gi|306834755|ref|ZP_07467820.1| leucine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304569367|gb|EFM44867.1| leucine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 948

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EKL +     YP+ A  H+GH +  I  D  AR++R+ G +VL T G D  G    + A
Sbjct: 52  KEKLNVQDMFPYPSGAGLHVGHPFGYIATDTYARYNRMLGKNVLHTMGYDAFGLPAEQYA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +     N  N R    +L + +D
Sbjct: 112 IQTGTHPRTTTMANIDNMRRQLGMLGLGHD 141


>gi|261250335|ref|ZP_05942911.1| isoleucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260939451|gb|EEX95437.1| isoleucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 945

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 541 VWFDSGVTHYSVVDAREEYNGASA-----DLYLEGSDQHRGWFQSSLISSIAMKGEAPY- 594

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 595 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 638



 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|225352579|ref|ZP_03743602.1| hypothetical protein BIFPSEUDO_04203 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156773|gb|EEG70167.1| hypothetical protein BIFPSEUDO_04203 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 928

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L +
Sbjct: 520 IMDTWATSSLTPQIVTRWEEPGEENQAIFNATFPMDLRPQGQDIIRTWLFSTVDRAHLEN 579

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       G D
Sbjct: 580 KCLPWANATLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARLGLD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTES-DESI 390
             YD+  +K  +   LA  + N    ++++  +D +  +  P          TE  D + 
Sbjct: 636 ATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAPATASWNPADVTEPLDRAA 693

Query: 391 LSVCSRVLQEIRENMQNQLIHRAL 414
           ++  + V++E  E++ N    +AL
Sbjct: 694 MAKMALVVREATESLNNYEHSKAL 717



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R++G DV +  G D++G    +
Sbjct: 45  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMNGYDVFYPMGWDDNGLPTER 104

Query: 61  AAQN 64
             QN
Sbjct: 105 RVQN 108


>gi|195126433|ref|XP_002007675.1| GI13074 [Drosophila mojavensis]
 gi|193919284|gb|EDW18151.1| GI13074 [Drosophila mojavensis]
          Length = 943

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L S    N    + +F HGF +  KG K+SKSLGNVI P
Sbjct: 585 ADLYLEGYD--QFTGWFQSSLLTSIAARNCAPYRALFVHGFTVDEKGHKMSKSLGNVISP 642

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G D LR+++ 
Sbjct: 643 KQITKKYGTDVLRWWVA 659



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA--GVTTKVF 72
           Y N Q H+GHA   I+ D+  R     G  V +  G D HG  I   A +A  G  + + 
Sbjct: 82  YANGQLHMGHAVNKILKDITLRQRVAHGQQVNYIPGWDCHGLPIELKATSAATGEQSALE 141

Query: 73  VDQNSRNF 80
           + Q SR F
Sbjct: 142 IRQKSRAF 149


>gi|220918010|ref|YP_002493314.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955864|gb|ACL66248.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 832

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 17/178 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA   G 
Sbjct: 38  YVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGFDALGLPAENAAIKDGR 97

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG--- 122
                  +N  +FR     L  S+D    + T +  ++   +  + K+ +KG  Y+    
Sbjct: 98  HPAERTRENVVSFRAEMKRLGYSFDWERELVTADASYYRWNQWFFLKLLEKGIAYRRQGK 157

Query: 123 ---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              C      + +E   +D+   +           +PV       + FR++AY  +LL
Sbjct: 158 VNWCTGCQTVIANEQVVDDNRCERCG---------SPVVEKIHPEWAFRITAYAQQLL 206


>gi|320534821|ref|ZP_08035239.1| tRNA synthetase class I [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320132969|gb|EFW25499.1| tRNA synthetase class I [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 938

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 14/148 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +  +    +G+L + D    + +P DL   G+DI+R   F ++   A L  A 
Sbjct: 555 IMDTWATSSLSPQLASGWLSDED-LFGRVYPMDLRPQGQDIIRTWLFTSVV-RADLEFAA 612

Query: 284 LPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           LP      S G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D  
Sbjct: 613 LPWTNAGLS-GWILDSDHK--KMSKSKGNVVTPMGLLEQYGSDAVRYW-ASSARLGLDAA 668

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +++  +K  +   LA  + N    ++SM
Sbjct: 669 FEETQIK--IGRRLAIKVLNASKFALSM 694



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H+GH +     D +ARF R+ G  V +  G D++G    +  QN
Sbjct: 77  HVGHVFSYTHTDTVARFQRMRGKAVFYPMGWDDNGLPTERRVQN 120


>gi|317014793|gb|ADU82229.1| isoleucyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 27/263 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCVLNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-----REIACGK 337
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++       ++   +
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVAFNDYQNDLRVSQ 650

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             F   +   K+      N +  L++    M LK+    +  P  F+  D  IL      
Sbjct: 651 TFFIQTEQHYKK----FRNTLKFLLANFSDMDLKN----LERPHDFSPLDHFILEALETT 702

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEV 454
              +    +   + + L  +++ V+      Y DA K        N ++   +  V + V
Sbjct: 703 STGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQAIQMVLLAV 762

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
             QL   L    P L + I ++L
Sbjct: 763 ASQLCYFL---APILTHTIGEVL 782


>gi|315099534|gb|EFT71510.1| isoleucine--tRNA ligase [Propionibacterium acnes HL059PA2]
          Length = 1107

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 61/292 (20%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGTDALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G ++  +AD A G G+          
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQQ--DADPARGSGD---------S 730

Query: 371 KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + G++P   A T+    D  ++S  + ++++I E + N    R    +   V E+  +
Sbjct: 731 RGFGGVVPP--AVTQRHVLDRWLVSATNVLVRDITEALNNFDTQRVGNLIAQFVDELSNW 788

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 789 YVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 836


>gi|227485363|ref|ZP_03915679.1| isoleucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236654|gb|EEI86669.1| isoleucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 1039

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 124/275 (45%), Gaps = 28/275 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           ++PD    ++ VW D+         Y  +N +  +  ++PAD    G D  R  F+++  
Sbjct: 515 RVPD----VLDVWFDSGAMPFAQLHYPFENKELFEKGYYPADFICEGIDQTRGWFYSLMA 570

Query: 276 PAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            + +     P  K V  +  ++ K G+K+SKS GN +DP  + ++ G DA+R++ +    
Sbjct: 571 ISTITMGRAPY-KNVLVNDLVVDKNGQKMSKSRGNTLDPFALFDKYGADAVRFYSLYVSP 629

Query: 335 CGKDGFYDKDGLKKRVNA-----DLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTES 386
                 +D+ GL +  N      +      +L + +  + L D   ++G +   G     
Sbjct: 630 AWMQTKFDEKGLVEVKNNFFRTFENVYNFFSLYAGTDGLTLADIKSFEG-VKVDGI---- 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPD 442
           D  + S  + +++   E M+N   ++ + ++   V E +  ++   + ++ W  + T  D
Sbjct: 685 DRWLYSRLNSLIKSYYEEMENFEYNKVVHEISDFVVEDLSNWYIRRNRKRFWSQELT--D 742

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +V   T +V+  L+ L+    P LA +I+  L
Sbjct: 743 SKKSVYKTTYDVLLSLSKLIAPITPFLAEEIYQKL 777


>gi|207091754|ref|ZP_03239541.1| isoleucyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVA 638


>gi|114326669|ref|YP_743826.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122328346|sp|Q0BW99|SYL_GRABC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114314843|gb|ABI60903.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 875

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 8/174 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA+  GV
Sbjct: 51  YVLEMFPYPSGQIHMGHVRNYTLGDVVARYKRAQGYQVLHPMGWDAFGLPAENAARERGV 110

Query: 68  TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-YKGCY 124
               +   N    R       L I+++    T +  ++   + L+     K  +  +  +
Sbjct: 111 HPGQWTWNNIAAMRGELQRMGLSITWEREFATCDPSYYGHQQALFLDFLKKNLVERRESW 170

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             W  + DE    +++V    DG+ + +   PV+  +   +F R++ Y ++LL+
Sbjct: 171 VNWDPV-DETVLANEQVI---DGKGWRS-GAPVERKKLSQWFLRITDYAEELLA 219


>gi|120406983|ref|YP_956812.1| leucyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|189030292|sp|A1TI06|SYL_MYCVP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119959801|gb|ABM16806.1| leucyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 968

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+ +  H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 66  DKMFVQDMFPYPSGEGLHVGHPLGYIATDVYARYYRMTGRNVLHALGFDAFGLPAEQYAI 125

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 126 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 154


>gi|71280655|ref|YP_268460.1| leucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123761059|sp|Q484Q5|SYL_COLP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71146395|gb|AAZ26868.1| leucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 863

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 12/180 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y      YP+ + H+GH     + DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  DKEKFYCLAMFPYPSGRLHMGHVRNYSLGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R+    L   YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKTAPGKWTYENIDYMRNQLQSLGFGYDWGRELATCKPDYYRWEQWFFTQLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   +  +   D+    +++V  G     G     +  P QW      F +++ Y ++LL
Sbjct: 151 KKNATVNWDPVDQTVLANEQVIDGRGWRSGALVERKQIP-QW------FIKITDYAEELL 203


>gi|296422888|ref|XP_002840990.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637218|emb|CAZ85181.1| unnamed protein product [Tuber melanosporum]
          Length = 905

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 17/132 (12%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAI 273
           +W   +  DP  ++  W  +     +  G+ +  PD SK  F+P  L   G DIL F   
Sbjct: 508 NWRFTLDRDPD-VLDTWFSSGLWPFSILGWPEKTPDMSK--FYPNSLLETGWDILFF--- 561

Query: 274 YWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
            W A +      ++  +P   +VF H  +    G K+SKSLGNVIDP+++I  +  DA+ 
Sbjct: 562 -WVARMAMLGIKMTGKVPF-NEVFCHSLVRDSDGRKMSKSLGNVIDPLDIINGIS-DAMH 618

Query: 327 YFLVREIACGKD 338
           +        G+D
Sbjct: 619 FAFCHYTTGGRD 630


>gi|312113630|ref|YP_004011226.1| isoleucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218759|gb|ADP70127.1| isoleucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 1039

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPADL++ G D  R  F +    +       P    V +HGF+   +G K+SKSLGN + 
Sbjct: 661 WPADLYLEGSDQHRGWFQSSLLESCGTRGRAPF-DTVLTHGFVNDEQGRKMSKSLGNTVA 719

Query: 313 PIEVIEEVGVDALRYFLV 330
           P ++I++ G D LR + +
Sbjct: 720 PQDIIKQSGADILRLWAL 737


>gi|254519578|ref|ZP_05131634.1| leucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913327|gb|EEH98528.1| leucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 816

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 13/182 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  AR  R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARMKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  K   D+N          +    ++D+ + T    ++   + ++ K+ +KG 
Sbjct: 88  FAIKTGIHPKDSTDKNIETMEKQLKAMGAMFNWDNEVITCNPDYYKWTQWVFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDK 175
            Y K     W    +    N ++V++GA  +      + +  QW      F +++ Y D+
Sbjct: 148 AYRKKAPVNWCPSCNTVLAN-EQVHEGACERCSTEVTKKDLTQW------FLKITDYADE 200

Query: 176 LL 177
           LL
Sbjct: 201 LL 202



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 17/120 (14%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKK 289
           Y D+ +  KA       K  P D +V G +    H +Y   F+  A       +   P K
Sbjct: 503 YPDSKNSEKAFDKDIVNKMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLDFDEPFK 561

Query: 290 VFSH-GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +H G IL   G K+SKS GN I P + I E G D  R +L+   A  + G +  DGLK
Sbjct: 562 SLTHQGLILGPDGLKMSKSKGNTISPNDYISEYGSDVFRMYLMFGFAYIEGGAWSDDGLK 621


>gi|229828682|ref|ZP_04454751.1| hypothetical protein GCWU000342_00748 [Shuttleworthia satelles DSM
           14600]
 gi|229793276|gb|EEP29390.1| hypothetical protein GCWU000342_00748 [Shuttleworthia satelles DSM
           14600]
          Length = 1065

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 202 SGLKDLSLSRKTFDW--------GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSK 252
           + + D+ L R   DW        G  +   P+ ++ VW D+         Y  +N D  +
Sbjct: 507 AAMADIELHRPYIDWVTFPCPHCGKPMHRVPE-VVDVWFDSGAMPYAQHHYPFENQDKFE 565

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGN 309
            +F PAD      D  R  F+++   + +L    P  K V   G +L  KG+K+SKS GN
Sbjct: 566 QQF-PADFISEAVDQTRGWFYSLMAESTILFGRAPY-KNVIVLGHVLDGKGQKMSKSKGN 623

Query: 310 VIDPIEVIEEVGVDALRYFL 329
            +DP+E +   G DA+R++ 
Sbjct: 624 AVDPMEALSTYGADAIRWYF 643


>gi|94730584|sp|Q4R646|SYIM_MACFA RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
          Length = 993

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG         ++ + AQN  
Sbjct: 98  YANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQN-- 155

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 156 -LSAMEIREKARSFAKAA--IEKQKSAFIR 182



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 575 QDILDIWFDSGTSW---SHVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVATRK 625

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 626 KAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWVADS 684

Query: 331 ---REIACG 336
               E+A G
Sbjct: 685 NVFTEVAIG 693


>gi|329962066|ref|ZP_08300077.1| valine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328530714|gb|EGF57572.1| valine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 880

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFIL 297
           ++NP   +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPGNEEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            K G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D
Sbjct: 529 DKLGRKMSKSLGNSPDPLDLIEKYGADGVRMGMMLSAPAGNDILFD 574


>gi|295136258|ref|YP_003586934.1| leucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984273|gb|ADF54738.1| leucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 1083

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 13/132 (9%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  EKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    +RT+   ++   +  W        I
Sbjct: 89  AIQTGQHPAITTKDNIARYREQLDKIGFSFDWSREVRTSNPEYYKWTQ--W--------I 138

Query: 120 YKGCYSGWYSLR 131
           +   +  WY L 
Sbjct: 139 FSELFESWYDLE 150


>gi|283954656|ref|ZP_06372174.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793848|gb|EFC32599.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 118

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G      A+NA
Sbjct: 32  KKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGM----PAENA 87

Query: 66  GVTTKVFVDQNSRNFRDMA 84
            +  K  +   S  + +MA
Sbjct: 88  AIKHK--IHPKSWTYENMA 104


>gi|304317769|ref|YP_003852914.1| leucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779271|gb|ADL69830.1| leucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 814

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 32/232 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP--------KKVFSHGFILHK-GEKIS 304
           K  P D ++ G +    H +Y   F+  A   L         K +   G IL   G K+S
Sbjct: 519 KMLPVDKYIGGAEHACMHLLY-ARFVTKALRDLGYLDFDEPFKSLIHQGIILGPDGNKMS 577

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P E I E G D  R +L+   A  + G ++ DG+K          +   +SR
Sbjct: 578 KSRGNTISPDEYINEYGSDVFRMYLMFGFAFTEGGPWNDDGIK---------AMSRFISR 628

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
              +I K  +    +       DE  L+ V +  ++ + ++ +    + A+A+++ LV+ 
Sbjct: 629 IERLIDKFTEDKGKSGKNEISKDEKELNYVRNYTIKSVTDDAEKFQFNTAIARIMELVNA 688

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + +Y D     E++  N       + +  E I  L  +L  F P  + ++++
Sbjct: 689 LYKY-DG----EVENKN-------MKLYEETIADLIRVLAPFAPHFSEEMWE 728



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+ A+ H GH Y    AD  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHAGHWYNYGPADSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYD 92
             G+  +    QN     R  ++M    D  Y+
Sbjct: 90  KTGIHPQDSTLQNIKTMERQLKEMGATFDWDYE 122


>gi|227502195|ref|ZP_03932244.1| leucyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077019|gb|EEI14982.1| leucyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 950

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EKL +     YP+ A  H+GH +  I  D  AR++R+ G +VL T G D  G    + A
Sbjct: 54  KEKLNVQDMFPYPSGAGLHVGHPFGYIATDTYARYNRMLGKNVLHTMGYDAFGLPAEQYA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +     N  N R    +L + +D
Sbjct: 114 IQTGTHPRTTTMANIDNMRRQLGMLGLGHD 143


>gi|167839949|ref|ZP_02466633.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 845

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + T       PD   A  +PADL++ G D  R  F +            P  
Sbjct: 547 VWFDSGSIHATVYRDAARPD---AGGYPADLYLEGADQHRGWFGSSLMTGCAADGRAPF- 602

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P ++    G D LR ++ 
Sbjct: 603 RAILTHGFVVDGAGRKMSKSLGNTVSPQQIASTRGADILRLWIA 646


>gi|109018264|ref|XP_001099877.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Macaca
           mulatta]
          Length = 986

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG         ++ + AQN  
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQN-- 174

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 175 -LSAMEIREKARSFAKAA--IEKQKSAFIR 201



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSW---SHVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVATRK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
             P  K V  HGF L  KGEK+SKSLGNVI P  V+
Sbjct: 645 KAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVV 679


>gi|154148579|ref|YP_001406468.1| isoleucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166200203|sp|A7I1S7|SYI_CAMHC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|153804588|gb|ABS51595.1| isoleucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 921

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           I+ VW D+ +   T    L + D    +F  AD+++ G D  R    +  + L+S+  N 
Sbjct: 537 ILDVWFDSGS---TWRAVLKSGDYDAGEF-RADMYLEGSDQHR--GWFQSSLLVSSAINE 590

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P K + +HGF +  KG+K+SKS+GNVI P EV ++ GV+ +R ++
Sbjct: 591 TAPYKSILTHGFTVDEKGQKMSKSVGNVIAPQEVAKKYGVEIMRLWV 637



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-------AAQNAGV 67
           Y N   HIGHA   I+ D++ + H   G +V +  G D HG  I +         +N   
Sbjct: 60  YANGHLHIGHALNKILKDIIVKTHYFAGENVRYVPGWDCHGLPIEQQIEIKLGGKKNETS 119

Query: 68  TTKV----------FVDQNSRNFRDMADVLDISYDD 93
            TK+          F++     F+DM  + D  +DD
Sbjct: 120 KTKIREMCRAHAREFINIQRDEFKDMGIIGD--WDD 153


>gi|317013188|gb|ADU83796.1| isoleucyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 920

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQHRGWFQSSLLIGCVLNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVA 638


>gi|309791520|ref|ZP_07686022.1| isoleucyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226445|gb|EFO80171.1| isoleucyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 1088

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 147/352 (41%), Gaps = 42/352 (11%)

Query: 146 DGQYYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
           DG++ N   N + W +  E Y+          +S   +H E I  +E   E+   V   L
Sbjct: 469 DGRFGNWLENNIDWAISRERYW---GTPLPIWVSADGNHMECIGSLE---ELEQKVGRSL 522

Query: 205 KDLSLSRKTFD---W-----GI--KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKA 253
           +DL L R   D   W     G   +IPD    +   W D+ +  +    Y  +N +  +A
Sbjct: 523 QDLDLHRPYVDDLTWEHPDHGTMRRIPD----VADCWYDSGSMPVAQWHYPFENQEVFEA 578

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNV 310
              PAD      D  R  F+ ++  + LL  + P    V   G IL  +G K+SKS GNV
Sbjct: 579 AH-PADYICEAVDQTRGWFYTLHAVSTLLF-DRPAFNNVICLGHILDEQGLKMSKSRGNV 636

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMI 369
           I P EVI + GVDALR++L      G    +        VN  L   +  L +  S  + 
Sbjct: 637 ITPQEVITQYGVDALRWYLFTAAPPGNPRRFS----GALVNESLRKFMLTLWNTYSFFVT 692

Query: 370 LKDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             + DG  P     TES      D   L+  + +++++  +++   ++ A   +   V E
Sbjct: 693 YANLDGWQP---GMTESVELQPIDRWALARLNGLVRDVTASLEEYEVYPAGRAIEHFVDE 749

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
           +  ++  +      K+  D      Y T+   +  ++ L+  F P +A  I+
Sbjct: 750 LSNWYVRRNRRRFWKSETDGDKQAAYQTLYTALLTVSKLMSPFAPFMAEAIY 801


>gi|212715391|ref|ZP_03323519.1| hypothetical protein BIFCAT_00286 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661697|gb|EEB22272.1| hypothetical protein BIFCAT_00286 [Bifidobacterium catenulatum DSM
           16992]
          Length = 910

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L +
Sbjct: 520 IMDTWATSSLTPQIVTRWEEPGEENQAIFNATFPMDLRPQGQDIIRTWLFSTVDRAHLEN 579

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       G D
Sbjct: 580 KCLPWANATLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARLGLD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTES-DESI 390
             YD+  +K  +   LA  + N    ++++  +D +  +  P          TE  D + 
Sbjct: 636 ATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAPATASWNPADVTEPLDRAA 693

Query: 391 LSVCSRVLQEIRENMQNQLIHRAL 414
           ++  + V++E  E++ N    +AL
Sbjct: 694 MAKMALVVREATESLNNYEHSKAL 717



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R++G DV +  G D++G    +
Sbjct: 45  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMNGYDVFYPMGWDDNGLPTER 104

Query: 61  AAQN---AGVTTKVFVDQN--------SRNFRDMADVLDISYDDFIRTTEK 100
             QN     V T +  D N             D  D + IS  +FI   EK
Sbjct: 105 RVQNYYGVRVDTSLKYDPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEK 155


>gi|145219290|ref|YP_001129999.1| isoleucyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205454|gb|ABP36497.1| Isoleucyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 1088

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 4/80 (5%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+ ++  A LL  +    + +  +G IL K G+K+SKS GNV
Sbjct: 580 RTFPADFIAEGVDQTRGWFYTLHAVASLL-FDTAAYRNLVVNGHILDKNGQKMSKSKGNV 638

Query: 311 IDPIEVIEEVGVDALRYFLV 330
           +DP E +E  G DA+R++L+
Sbjct: 639 VDPFETMERYGADAIRWYLM 658


>gi|317055677|ref|YP_004104144.1| isoleucyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447946|gb|ADU21510.1| isoleucyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 1037

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 16/203 (7%)

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
           P       HG IL K G+K+SKS  N  DP+E++++ G DA R +L +  A    D  +D
Sbjct: 586 PCFSNCVVHGTILAKDGKKLSKSSRNYTDPMELMKKFGTDAFRLYLYQTNAMLIGDLQFD 645

Query: 343 KDGLK---KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +G+    +++   L N     +S +     K  + + P P +  + D  +L+      +
Sbjct: 646 DNGISDALQQIIFPLWNACNFYISYANIDDFKP-ESLTP-PTSDNQLDRWMLAKLWEASE 703

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWE--LKKTNPDRASTVLYVTVEV 454
            I +NM    +++ +  +I LV  +  +F     ++ WE  L +   +   T+ YV V +
Sbjct: 704 AISKNMDAYFVNKYVENLIELVDGLTNWFIRRSRRRFWEKGLSEDKKNAYETLYYVLVNM 763

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            +    L     P +A K++  L
Sbjct: 764 CK----LFAPAAPIIAEKLYRTL 782


>gi|284044106|ref|YP_003394446.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948327|gb|ADB51071.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 854

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 24/255 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +      T G+       KA F+P D+    +DIL      W A ++  
Sbjct: 441 DPD-VLDTWFSSALWPFATLGWPRETPELKA-FYPTDVLSTARDIL----FLWVARMIMM 494

Query: 283 NLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +V      +H       G ++SKSLG  IDP++ IE  G D +R+ L+  ++  
Sbjct: 495 GLEFAGEVPFRDVYIHSVIQAPDGRRMSKSLGTGIDPLDEIESHGADGVRFGLL-AMSSS 553

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  Y  + +++     LAN + N  SR V   +         P A    D  ILS  + 
Sbjct: 554 QDVRYSAEKVQQ--GQQLANKLWN-ASRLVLTRIDPEARPASRPQAV--EDRWILSRLAH 608

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR---ASTVLYVT 451
              E+ E ++      A+  +   V     D Y +  KP   +    +R   ++T+L+V 
Sbjct: 609 TRAEVAERIEAYDFSHAVLGLYDFVYGELCDWYLELVKPRLYEAEGQERDDLSATLLHVL 668

Query: 452 VEVIRQLAILLQAFV 466
            E + QLA  +  FV
Sbjct: 669 TETL-QLAHPVIPFV 682


>gi|299821567|ref|ZP_07053455.1| isoleucine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817232|gb|EFI84468.1| isoleucine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 929

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++        N        +PADL++ G D  R  F++    +  ++   
Sbjct: 531 IMDVWFDSGSSHEAVLKQRPNLT------FPADLYLEGSDQYRGWFNSSITTSVAINGVA 584

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF L  +G K SKSLGN I+P +V  ++G D LR ++ 
Sbjct: 585 PY-KAVLSQGFTLDPQGRKQSKSLGNTIEPKKVTNQLGADILRLWVA 630



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R+  + G    +  G D HG  I +   N GV  K    
Sbjct: 67  YANGNIHLGHSLNKISKDIIVRYKSMTGFRSPYVPGWDTHGLPIEQVLANKGVKRKEMTM 126

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  +++   T +  +      ++ K+++KG 
Sbjct: 127 AEYRKHCMEYALSQVDKQREDFKRLGVAAD--WENPYITLQPEYEAAQIRVFGKMAEKGY 184

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 185 IYKGLKPIYWSPSSESSLAEAEI 207


>gi|152993379|ref|YP_001359100.1| isoleucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166229775|sp|A6QB84|SYI_SULNB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151425240|dbj|BAF72743.1| isoleucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 918

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 39/279 (13%)

Query: 227 IMYVWIDALT--NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-- 282
           I+ VW D+ +  N + ++G  D      A  +PA L++ G D  R    +  + LLS+  
Sbjct: 536 ILDVWFDSGSTWNSVLSSGNYD------AGNYPASLYLEGSDQHR--GWFQSSLLLSSAI 587

Query: 283 NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           N   P + + +HGF +  KGEK+SKS GNV+ P +V+++ G + LR ++           
Sbjct: 588 NGIAPYETIITHGFTMDAKGEKMSKSKGNVVAPEKVVKQFGSEILRLWVALSDYQNDQKI 647

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D D LK+   A+    I N   R +   + D D ++ +  A+ E D  IL+    V   
Sbjct: 648 SD-DILKQ--TAEQYRKIRNTF-RFLLANVNDLDALV-SADAYGELDRWILNKADDVFAS 702

Query: 401 IRENMQ-----------NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR----AS 445
           ++E+ +           N  I   L+ +   V++ DR +   K  ++++         + 
Sbjct: 703 VKESFETYDFLKGFATLNHFITNELSGIYMDVTK-DRLYCEAKDSDVRRATQSAMALISK 761

Query: 446 TVLYVTVEVIRQLAILLQAFVPKL----ANKIFDILFVA 480
            +L +   V+   A  + A+ P +       +FD+++ A
Sbjct: 762 AMLGLIAPVLTYTADEILAYAPAIFKGDIENVFDLVYEA 800



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 18/92 (19%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ +++   G  V  T G D HG        +K+ K+ + A 
Sbjct: 58  YANGDIHIGHALNKILKDIILKYNYFQGKAVRMTPGWDCHGLPIEQKVEEKLGKSKKEAM 117

Query: 67  VTTKV----------FVDQNSRNFRDMADVLD 88
            T K           FVD     F+ +  V D
Sbjct: 118 PTEKFRELCRAHAGKFVDIQRDEFKSLGVVAD 149


>gi|108705809|gb|ABF93604.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 933

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 14/110 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL F    W A +   
Sbjct: 497 DPD-VLDTWFSSGLFPLTVLGWPDDTADVKA-FYPGSVLETGHDILFF----WVARMVMM 550

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
              L  ++P  +KV+ H  I    G K+SKSLGNVIDP++VI  + ++ L
Sbjct: 551 GMQLGGDVPF-QKVYLHPMIRDAHGCKMSKSLGNVIDPVDVINGIPLEGL 599


>gi|15897507|ref|NP_342112.1| leucyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174825|ref|ZP_06388794.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|14916942|sp|O33768|SYL2_SULSO RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|6015883|emb|CAB57710.1| isoleucyl-trna synthetase [Sulfolobus solfataricus P2]
 gi|13813756|gb|AAK40902.1| Leucyl-tRNA synthetase (leuS-2) [Sulfolobus solfataricus P2]
 gi|261602268|gb|ACX91871.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 944

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K + + A  YPN+  HIGH    +  D+LAR+ R+ G +VLF       G  I   A 
Sbjct: 26  KPKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMAD 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADV 86
                 K  ++     F+D+ ++
Sbjct: 86  AIAKGDKELIE----TFKDIYEI 104



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H    I+  A +   NL  PK +  +G +L++G+K+SKSL N+I
Sbjct: 574 WYPLDIRHSGKDLIPNHLTFFIFNHAAIFQENL-WPKAIAVNGLVLYEGKKMSKSLRNII 632

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + ++  GVD +R  +      G D  +  + L K V   L         R +  + K
Sbjct: 633 PLRKGLKMYGVDVMRIAVSSTADMGSDVNFS-ESLVKTVGETL---------RKMYELFK 682

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDA 430
             D        F E  + +LS    +      +M+   +  A+ +++ +  S++D YF  
Sbjct: 683 SLDNYTGDILGFPE--KWLLSRIYEITSSTTRHMEALELRDAVNELLFVFSSDLDEYFGM 740

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               E ++ N      VL + ++       L+  F P LA +I+
Sbjct: 741 VSA-EGREANNKVLREVLTIWLK-------LITPFAPHLAEEIW 776


>gi|71656320|ref|XP_816709.1| valyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881855|gb|EAN94858.1| valyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 975

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 12/109 (11%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+  + D    KF+P +L   G DIL F    W A ++  
Sbjct: 487 DPD-VLDTWFSSAMWPYSTLGWPGDTD-DMHKFFPGNLMETGHDILFF----WVARMVMT 540

Query: 283 NL----PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           +L     LP  +VF H  +  K GEK+SKS GNVIDP+ +I  + ++ L
Sbjct: 541 SLHFTGKLPFSEVFLHAMVRDKNGEKMSKSKGNVIDPLFIINGITLEGL 589



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 14/77 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH+    + D L RFHR+ G + L+  GTD           +AG+ T+V V++  R  
Sbjct: 60  HLGHSLTGAVQDTLIRFHRMKGDNTLYVPGTD-----------HAGIATQVVVEK--RLL 106

Query: 81  RDMADVL-DISYDDFIR 96
           R+      D+  ++F++
Sbjct: 107 RESGKTRHDLGREEFLK 123


>gi|319897524|ref|YP_004135721.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433030|emb|CBY81401.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 924

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 510 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 558

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV++E G D LR ++     
Sbjct: 559 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDEFGGDILRLWVASTDY 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 619 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 671

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 672 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 704


>gi|254508960|ref|ZP_05121067.1| tRNA synthetases class I (I, L, M and V) family [Vibrio
           parahaemolyticus 16]
 gi|219548135|gb|EED25153.1| tRNA synthetases class I (I, L, M and V) family [Vibrio
           parahaemolyticus 16]
          Length = 655

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 251 VWFDSGVTHYSVVDAREEYNGASA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 304

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  L
Sbjct: 305 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSDEI-L 363

Query: 347 KKRVNA 352
           K+  +A
Sbjct: 364 KRSADA 369


>gi|330469304|ref|YP_004407047.1| leucyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812275|gb|AEB46447.1| leucyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 952

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+     YP+ A  H+GH    I  D  AR+ R+ G +VL   G D  G    + A 
Sbjct: 64  EKLYVLDMFPYPSGAGLHVGHPLGYIGTDCFARYQRMAGRNVLHAMGFDAFGLPAEQYAV 123

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N   +R+    L +++D
Sbjct: 124 QTGTHPRTTTEANIERYREQLRRLGLAHD 152


>gi|261840097|gb|ACX99862.1| isoleucyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 920

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVILEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    +++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKTHGSDVVRLWVA 638


>gi|212534296|ref|XP_002147304.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210069703|gb|EEA23793.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 1124

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P D+ V GKD+++ H  ++  ++  A  P    P+ V S+G +L  GEK+SKS GN +
Sbjct: 711 FYPLDVRVSGKDLIQNHLTFF-LYIHIALFPQEYWPRGVRSNGHLLLNGEKMSKSTGNFL 769

Query: 312 DPIEVIEEVGVDALR 326
              + +++ G DA R
Sbjct: 770 TLKDAVDKYGADATR 784


>gi|281420248|ref|ZP_06251247.1| isoleucine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405743|gb|EFB36423.1| isoleucine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 1203

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 10/117 (8%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKV 290
           DAL  + T  GY   P     KF+PAD    G D  R  F  ++  A ++  ++   K V
Sbjct: 694 DALI-HSTYEGYAIPP-----KFYPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNV 746

Query: 291 FSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            S G +L  KG K+SK +GNV +P E+I++ G D +R++++       +  +D +G+
Sbjct: 747 ISSGLVLDAKGNKMSKHVGNVTNPFEMIDKYGADPVRFYMMTNSEPWDNLKFDPNGV 803


>gi|157736834|ref|YP_001489517.1| valyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698688|gb|ABV66848.1| valyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 871

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L + G DI+ F    W A ++         LP  K ++ H  +  + G K+SKS 
Sbjct: 483 FYPNSLLITGFDIMFF----WVARMMMMGEHFRGELPF-KDIYMHALVRDEHGAKMSKSK 537

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           GNVIDP++++EE   D +R+ L      G+D
Sbjct: 538 GNVIDPLDMVEEHSADIIRFTLAYLAVQGRD 568



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK 70
           HIGHA    + D++ R+ R+DG   L+  GTD  G   Q + +    A  TTK
Sbjct: 53  HIGHALTFTLQDIITRYKRMDGFKTLWQPGTDHAGIATQNVVEKQLLAEGTTK 105


>gi|163851006|ref|YP_001639049.1| leucyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163662611|gb|ABY29978.1| leucyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 901

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 72  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 131

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N    R     + +S D
Sbjct: 132 ERKVNPREWTYANIATMRGQLQSMGLSLD 160



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP +++   G D  R+F++ +    +D  + ++G++             
Sbjct: 669 EKMSKSKKNVVDPDDIMASYGADTARWFMLSDSPPERDVIWTEEGVQG------------ 716

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R V  + +   G     G    +D  +     + L  + E+++    +R +A + +L
Sbjct: 717 -AARFVQRVWRLVHGATAANGPGGTADAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 775

Query: 421 VSEVD 425
            + +D
Sbjct: 776 ANALD 780


>gi|319403670|emb|CBI77255.1| Isoleucyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 971

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 13/129 (10%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPAD++  G D  R  F +    +    A  P  K V +HGF L   G+K+SKSLGN I 
Sbjct: 595 WPADVYFEGSDQHRGWFQSSLLESCGTRACSPY-KTVVTHGFTLDENGKKMSKSLGNTIM 653

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV---NADLANGIGNLVSRSVSMI 369
           P ++I+  G D  R +++         +++   L K++   N D    + N +   + ++
Sbjct: 654 PQDIIKTSGADIFRLWVM------TTDYWEDQRLGKKILQTNVDSYRKLRNAIRWMLGIL 707

Query: 370 LKDYDGMIP 378
           + D    IP
Sbjct: 708 VYDEGEEIP 716



 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 65  YANGNIHIGHALNKVLKDVIVRSFQMRGFNANYVPGWDCHGLPI 108


>gi|312898161|ref|ZP_07757552.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
 gi|310620658|gb|EFQ04227.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
          Length = 931

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 14/108 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---AN 283
           IM VW D+   +     +  +P+ +    +PAD+++ G D    H  ++ + LL+   AN
Sbjct: 534 IMDVWFDSGCTHQGVLCH--DPELA----YPADMYLEGSDQ---HRGWFNSSLLTSVAAN 584

Query: 284 LPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              P K V +HGF +  +G K+SKS+GN + P EVI++ G D +R ++
Sbjct: 585 GIAPYKAVLTHGFTVDGEGRKMSKSVGNTVAPQEVIDQYGADVMRLWV 632



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 18/159 (11%)

Query: 1   MKERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           +K+RE   K  +     Y N + HIGHA   ++ D++ ++    G    +  G D HG  
Sbjct: 41  LKKREGAKKFILHDGPPYANGKLHIGHALNKVLKDIILKYKTQQGFYTKYVPGWDTHGLP 100

Query: 58  IAKAA-QNAGVTTKVF--VDQNSRNFRDMADVLDISYDDFIR-----------TTEKRHH 103
           I  A  +  G+       +D   R        +D    DFIR            T  +H 
Sbjct: 101 IEHAVIKETGLNRHEMSPLDLRKRCHDYALARVDEQRADFIRFGVLGEWDYPYLTLAKHV 160

Query: 104 DTCRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  +I ++  ++ KG IYKG  + ++    E    + E+
Sbjct: 161 EVAQIGVFGTMAKKGYIYKGLKAVYWCPHCETALAEAEI 199


>gi|301167554|emb|CBW27137.1| leucyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 924

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH    I +D+  RF RL+G +VL   G D  G    + A
Sbjct: 30  KPKYYILDMFPYPSGAGLHVGHPLGYIASDIYTRFKRLEGYNVLHPMGYDAFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +N   +R+  D +  SYD
Sbjct: 90  IQTGRHPADTTRENIARYREQLDKIGFSYD 119


>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 929

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 22/165 (13%)

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---GIKIPDDPQY-------IM 228
           +Y  + E I+  E    V   V     D+   R+  D    G   P  P         IM
Sbjct: 466 FYGENGEPIITPETIEHVAKLVGEFGSDVWFEREAKDLLPEGFTHPSSPNGTFTKEMDIM 525

Query: 229 YVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
            VW D+ +++    G L   P+ +    +PADL++ G D  R  F++    +  +    P
Sbjct: 526 DVWFDSGSSH---AGVLSVRPELT----FPADLYLEGSDQYRGWFNSSLTTSVAVHKQAP 578

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             K V S GF++  +G+K+SKSLGNVI P + ++  G D +R ++
Sbjct: 579 Y-KAVLSQGFVMDGEGKKMSKSLGNVISPAKEMQTKGADIIRLWV 622



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 19/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVF- 72
           Y N   H+GHA   I  D + R   + G    +  G D HG  I +A  NA GV  K   
Sbjct: 58  YANGALHMGHALNKISKDFIVRSKSMSGFRAPYVPGWDTHGLPIEQALANAEGVDRKKLS 117

Query: 73  ---------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                          VD     F+ +   +  ++D+   T +         ++ K+++ G
Sbjct: 118 IAEFRKLCAEYALRQVDNQRAEFKRLG--VTGTWDNPYLTLQPEFEAEQIRVFGKMAENG 175

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 176 YIYKGLKPIYWSPSSESSLAEAEI 199


>gi|195154941|ref|XP_002018371.1| GL16801 [Drosophila persimilis]
 gi|194114167|gb|EDW36210.1| GL16801 [Drosophila persimilis]
          Length = 1048

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 595 PDNTKDLQTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 649

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDPI+VI  + ++ L   LV      REI   K G
Sbjct: 650 HGRKMSKSLGNVIDPIDVILGITLEGLHAQLVGSNLDPREIEKAKAG 696


>gi|331265959|ref|YP_004325589.1| isoleucyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682631|emb|CBZ00248.1| isoleucyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-V 73
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K   +
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +  +  R+ A   +D   DDF R            T    ++  +I ++ +++ KG IY
Sbjct: 118 VEYLKLCREYALSQVDKQRDDFKRLGVSGDWENPYVTLTPDYEAAQIRVFGEMAKKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|293604537|ref|ZP_06686942.1| valine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817118|gb|EFF76194.1| valine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 964

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 15/107 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------ 279
           ++  W  +     TT G+ DN PD    ++ P+ + V G DI+ F    W A +      
Sbjct: 496 VLDTWFSSGLVPFTTLGWPDNTPD--LQRYLPSSVLVTGFDIIFF----WVARMVMLTTH 549

Query: 280 LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           ++  +P  K V+ HG I    G+K+SKS GN +DP+++I+ + +D L
Sbjct: 550 MTGQIPF-KHVYVHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLDGL 595



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+ R+ G D +F  GTD           +AG+ T++ V++ 
Sbjct: 71  HMGHAFNQTIMDGLVRYRRMSGDDTVFIPGTD-----------HAGIATQIVVERQ 115


>gi|222475548|ref|YP_002563965.1| valyl-tRNA synthetase (valS) [Anaplasma marginale str. Florida]
 gi|222419686|gb|ACM49709.1| valyl-tRNA synthetase (valS) [Anaplasma marginale str. Florida]
          Length = 822

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 16/157 (10%)

Query: 255 FWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +P DL     +I+R  A Y    ++  +  +P    + S   +     K+SKS GN +D
Sbjct: 500 LFPTDLRAQSHEIIRSWAFYTMLKSYYHNGEIPWQNIMISGWCLAEDKTKMSKSKGNAMD 559

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMIL 370
           P   ++  G D++RY+  +    G D  + ++ LK  +R+   L N      S+ V+  L
Sbjct: 560 PESTLDLYGADSVRYWAAKS-RLGADTVFSEEVLKTGRRLTTKLWNA-----SKFVATFL 613

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +D       P A T +  + L + S++ + +  N +N
Sbjct: 614 RD------NPPAGTTAAPTDLWILSKLHKAVAHNTEN 644


>gi|195066025|ref|XP_001996766.1| GH24997 [Drosophila grimshawi]
 gi|193896621|gb|EDV95487.1| GH24997 [Drosophila grimshawi]
          Length = 1046

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     +  G+ DN    +A F+P  L   G DIL F    W A +      L
Sbjct: 575 VLDTWFSSGLFPFSVFGWPDNTADLQA-FYPTSLLETGHDILFF----WVARMVFFGQKL 629

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REI 333
              LP  K+V+ H  +    G K+SKSLGNVIDP++VI  + ++ L   LV      REI
Sbjct: 630 LGKLPF-KEVYLHPMVRDAHGRKMSKSLGNVIDPMDVICGISLEGLHEQLVGSNLDPREI 688

Query: 334 ACGKDG 339
              K G
Sbjct: 689 EMAKLG 694


>gi|197123221|ref|YP_002135172.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173070|gb|ACG74043.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 832

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 17/178 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA   G 
Sbjct: 38  YVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGFDALGLPAENAAIKDGR 97

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG--- 122
                  +N  +FR     L  S+  D  + T +  ++   +  + K+ +KG  Y+    
Sbjct: 98  HPAERTRENVVSFRAEMKRLGYSFDWDRELVTADASYYRWNQWFFLKMLEKGIAYRRQGK 157

Query: 123 ---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              C      + +E   +D+   +           +PV       + FR++AY  +LL
Sbjct: 158 VNWCTGCQTVIANEQVVDDNRCERCG---------SPVVEKIHPEWAFRITAYAQQLL 206


>gi|148978532|ref|ZP_01814984.1| isoleucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962321|gb|EDK27602.1| isoleucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 946

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 542 VWFDSGVTHFSVVDSREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 595

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 596 KQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 639



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|23008069|ref|ZP_00049667.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 192

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 41  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N    R     + +S D
Sbjct: 101 ERKVNPRDWTYANIATMRGQLQSMGLSLD 129


>gi|270339726|ref|ZP_06005817.2| isoleucine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333958|gb|EFA44744.1| isoleucine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 1235

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNV 
Sbjct: 737 FFPADFINEGVDQTRGWFFTLHAIATMVFDSVSF-KNVISSGLVLDAKGNKMSKHVGNVT 795

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +P E+IE+ G D +R++++       +  +D +G+
Sbjct: 796 NPFEMIEKYGADPVRFYMMTNSEPWDNLKFDPNGI 830


>gi|227874925|ref|ZP_03993077.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|306818249|ref|ZP_07451979.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|227844502|gb|EEJ54659.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|304648988|gb|EFM46283.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 892

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM  W  +        G+L + D   A  +P DL   G+DI+R    +    + L    L
Sbjct: 528 IMDTWATSSLTPEIYAGFLHD-DKLFANTFPMDLRPQGQDIIRTWLFSTVVRSHLEFGTL 586

Query: 285 PLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           P  +   S G+IL   HK  K+SKS GNV+ P+ ++E+   DA+RY+       G D  +
Sbjct: 587 PWRQAALS-GWILDPDHK--KMSKSKGNVVTPMGLLEKHSSDAVRYWAA-SARLGTDAAF 642

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  V   LA  + N    ++SM   D + ++ +       D+S+L++ ++V+   
Sbjct: 643 DEGQMK--VGRRLAIKLLNASKFALSMG-GDGELVLDSERVTVPVDKSLLAMLAKVIDTA 699

Query: 402 RENMQNQLIHRALAQVISLV-SEVDRYFDAQK-------PWELKKTNPDRASTVLYVTVE 453
               +     RAL    S   +  D Y +  K        W   ++  D A T L + ++
Sbjct: 700 TAAFEKLDHARALEVTESFFWTLCDDYLELVKDRAYGVDTW-TDQSGVDSARTTLALAID 758

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + +   LL  F+P  A +++
Sbjct: 759 AVVR---LLAPFLPFTAAEVW 776



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REAVYSIDTPPPTVSGSLHVGHVFSYTHTDLVARYQRMRGKNVFYPMGWDDNGLPTERRV 106

Query: 63  QN 64
           QN
Sbjct: 107 QN 108


>gi|303286673|ref|XP_003062626.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456143|gb|EEH53445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 967

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------ 299
           PD S   A+F+P  L   G DIL     +W A ++   + L  KV      LH       
Sbjct: 500 PDESPDLAEFYPTSLLETGHDIL----FFWVARMVMMGMKLTGKVPFKQVYLHAMVRDAH 555

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           G K+SKSLGNVIDP+ VIE + +  L   L
Sbjct: 556 GRKMSKSLGNVIDPLHVIEGISLPELNKTL 585


>gi|170730502|ref|YP_001775935.1| leucyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687921|sp|B0U376|SYL_XYLFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167965295|gb|ACA12305.1| leucyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 879

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  Y 
Sbjct: 95  KNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 155 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 206



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 587 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 633

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 634 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 663


>gi|139437040|ref|ZP_01771200.1| Hypothetical protein COLAER_00174 [Collinsella aerofaciens ATCC
           25986]
 gi|133776687|gb|EBA40507.1| Hypothetical protein COLAER_00174 [Collinsella aerofaciens ATCC
           25986]
          Length = 898

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 57/250 (22%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYV----WIDALTN---------------------- 237
           LKD  +SR+ + WG +IP     + Y     W DALT                       
Sbjct: 399 LKDWCISRQLW-WGHRIP-----VFYCEDCGWEDALTEDTDVCPKCGGHHVHQDENVLDT 452

Query: 238 -------YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL------ 284
                     T G+   P+  +    P    V  +DI+      W A ++ ++L      
Sbjct: 453 WFSSQLWTFATQGWPQKPELLEGHH-PTTALVTARDIIAL----WVARMVMSSLYFLDEV 507

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V     +   G ++SKS GN +DP+++I   G DA+RY L+      +D  +D +
Sbjct: 508 PFKDVVIYPTILAKDGSRMSKSKGNGVDPMDLIGMYGADAMRYNLLTLCTNNQDVKFDAN 567

Query: 345 ---GLKKRVNADLANGIGNLVSR---SVSMILKDYDGMIP-TPGAFTESDESILSVCSRV 397
                KK +++       + V++   +   +L + +G  P  P   T +D  + S  ++ 
Sbjct: 568 IDKKTKKLIDSPRTEQAKSFVTKIWNASRFLLMNMEGYTPGEPVVETPADAWMFSRLAKA 627

Query: 398 LQEIRENMQN 407
           ++ + E ++N
Sbjct: 628 VKMVTEGIEN 637


>gi|308064176|gb|ADO06063.1| isoleucyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 920

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYQGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKMHGSDVVRLWVA 638


>gi|269976474|ref|ZP_06183459.1| valyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269935275|gb|EEZ91824.1| valyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 892

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM  W  +        G+L + D   A  +P DL   G+DI+R    +    + L    L
Sbjct: 528 IMDTWATSSLTPEIYAGFLHD-DKLFANTFPMDLRPQGQDIIRTWLFSTVVRSHLEFGTL 586

Query: 285 PLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           P  +   S G+IL   HK  K+SKS GNV+ P+ ++E+   DA+RY+       G D  +
Sbjct: 587 PWRQAALS-GWILDPDHK--KMSKSKGNVVTPMGLLEKHSSDAVRYWAA-SARLGTDAAF 642

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  V   LA  + N    ++SM   D + ++ +       D+S+L++ ++V+   
Sbjct: 643 DEGQMK--VGRRLAIKLLNASKFALSMG-GDGELVLDSERVTVPVDKSLLAMLAKVIDTA 699

Query: 402 RENMQNQLIHRALAQVISLV-SEVDRYFDAQK-------PWELKKTNPDRASTVLYVTVE 453
               +     RAL    S   +  D Y +  K        W   ++  D A T L + ++
Sbjct: 700 TAAFEKLDHARALEVTESFFWTLCDDYLELVKDRAYGVDTW-TDQSGVDSARTTLALAID 758

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + +   LL  F+P  A +++
Sbjct: 759 AVVR---LLAPFLPFTAAEVW 776



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REAVYSIDTPPPTVSGSLHVGHVFSYTHTDLVARYQRMRGKNVFYPMGWDDNGLPTERRV 106

Query: 63  QN 64
           QN
Sbjct: 107 QN 108


>gi|154488118|ref|ZP_02029235.1| hypothetical protein BIFADO_01689 [Bifidobacterium adolescentis
           L2-32]
 gi|154083591|gb|EDN82636.1| hypothetical protein BIFADO_01689 [Bifidobacterium adolescentis
           L2-32]
          Length = 909

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 23/208 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM  W  +       T + +  + ++A F   +P DL   G+DI+R    +    A L +
Sbjct: 520 IMDTWATSSLTPQIVTRWEEPGEENQAIFNATFPMDLRPQGQDIIRTWLFSTMDRAHLEN 579

Query: 282 ANLPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             LP      S G+IL   HK  K+SKS GNV+ P + I++ G DA+RY+       G D
Sbjct: 580 KCLPWANTTLS-GWILDPDHK--KMSKSKGNVVVPDKPIKQFGADAVRYWAA-AARLGLD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTES-DESI 390
             YD+  +K  +   LA  + N    ++++  +D +  +  P          TE  D S 
Sbjct: 636 ATYDEGQMK--IGRRLAIKLLNATKFALAIGREDENHHVGAPAVAAWNPADVTEPIDRSA 693

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVI 418
           +S  + V++E  +++ N+  H    +VI
Sbjct: 694 MSKMAAVVREATDDL-NKYEHSKALEVI 720



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++R+ +Y I T     +   H+GH +     DV+ARF R++G DV +  G D++G    +
Sbjct: 45  RDRKAVYSIDTPPPTVSGHLHVGHVFSYTHTDVIARFKRMNGYDVFYPMGWDDNGLPTER 104

Query: 61  AAQN---AGVTTKVFVDQN--------SRNFRDMADVLDISYDDFIRTTEK 100
             QN     V T +  D N             D  D + IS  +FI   EK
Sbjct: 105 RVQNYYGVRVDTSLKYDPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEK 155


>gi|71898470|ref|ZP_00680642.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
 gi|71731783|gb|EAO33842.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
          Length = 879

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  Y 
Sbjct: 95  KNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 155 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 206



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 587 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 633

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 634 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 663


>gi|332185552|ref|ZP_08387300.1| isoleucyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014530|gb|EGI56587.1| isoleucyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 943

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           V +HGF L  +G K+SKSLGNV+DP+++I E G D LR +
Sbjct: 631 VLTHGFALDGQGRKMSKSLGNVVDPLKIIGESGADILRIW 670



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 32/72 (44%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+  +     Y N   H+GHA   ++ D++ R   L G D  +  G D HG  I    +
Sbjct: 51  RERFILHDGPPYANGDIHMGHALNKVLKDIIVRSQSLMGKDAPYVPGWDCHGLPIEWKVE 110

Query: 64  NAGVTTKVFVDQ 75
            A    K+  D+
Sbjct: 111 EAYRAKKLNKDE 122


>gi|313665287|ref|YP_004047158.1| isoleucine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949203|gb|ADR23799.1| isoleucine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 908

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + +   P  K++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDIYLEGNDQYRGWFNASMINSTIYANKSPY-KQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           IE   E+G D LR ++
Sbjct: 607 IEFSNELGADILRLWV 622



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 64/163 (39%), Gaps = 24/163 (14%)

Query: 1   MKEREKLYI-STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + E +K++I      Y N   HIGHA    + D + R+    G    F  G D HG  I 
Sbjct: 45  LNENKKIFILHDGPPYANGDLHIGHALNKTLKDFIVRYRNAAGYYSPFIMGWDTHGLPIE 104

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDM------------ADVLD-----ISYD-DFIRTTEKR 101
            A    GV  K     +S  FR++            AD  +       YD  ++  T   
Sbjct: 105 SAITKMGVDRK---SMSSVAFRELCYKYALGQIQNQADQFNRLGMFTDYDVKYVTLTHDF 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYK 143
                R L++K+  KG IYK     ++S   E    D E VYK
Sbjct: 162 EMSELR-LYEKMYQKGLIYKDLKPIYWSPSSETALADSEIVYK 203


>gi|307701819|ref|ZP_07638833.1| valine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613077|gb|EFN92332.1| valine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 892

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM  W  +        G+L + D   A  +P DL   G+DI+R    +    + L    L
Sbjct: 528 IMDTWATSSLTPEIYAGFLHD-DKLFANTFPMDLRPQGQDIIRTWLFSTVVRSHLEFGTL 586

Query: 285 PLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           P  +   S G+IL   HK  K+SKS GNV+ P+ ++E+   DA+RY+       G D  +
Sbjct: 587 PWRQAALS-GWILDPDHK--KMSKSKGNVVTPMGLLEKHSSDAVRYWAA-SARLGTDAAF 642

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  V   LA  + N    ++SM   D + ++ +       D+S+L++ ++V+   
Sbjct: 643 DEGQMK--VGRRLAIKLLNASKFALSMG-GDGELVLDSERVTVPVDKSLLAMLAKVIDTA 699

Query: 402 RENMQNQLIHRALAQVISLV-SEVDRYFDAQK-------PWELKKTNPDRASTVLYVTVE 453
               +     RAL    S   +  D Y +  K        W   ++  D A T L + ++
Sbjct: 700 TAAFEKLDHARALEVTESFFWTLCDDYLELVKDRAYGVDTW-TDQSGVDSARTTLALAID 758

Query: 454 VIRQLAILLQAFVPKLANKIF 474
            + +   LL  F+P  A +++
Sbjct: 759 AVVR---LLAPFLPFTAAEVW 776



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +  
Sbjct: 47  REAVYSIDTPPPTVSGSLHVGHVFSYTHTDLVARYQRMRGKNVFYPMGWDDNGLPTERRV 106

Query: 63  QN 64
           QN
Sbjct: 107 QN 108


>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 929

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PAD+++ G D  R  FH+    +  ++   P  + V S GF+   +G K+SKS+GN + P
Sbjct: 554 PADMYLEGSDQYRGWFHSSLLTSVAVNNEAPY-RSVLSQGFVNDGEGRKMSKSIGNTVSP 612

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +VI++ G D LR ++        D +YD
Sbjct: 613 NDVIKQRGADILRLWV-----SSVDTYYD 636



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I  D++ R   + G    +  G D HG  I +A  N+GV  K    
Sbjct: 64  YANGNIHIGHAMNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQALTNSGVDRKSMT- 122

Query: 75  QNSRNFRDMAD-----VLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKG 117
                FR + +      ++   DDF R            T     +  +I L+  + +KG
Sbjct: 123 --VAEFRKLCEEYAWKQINGQRDDFKRLGVAGDWENPYLTLAPEFEAQQIRLFGDMYEKG 180

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 181 LIYKGAKPVYWSPSSESTLAEAEI 204


>gi|194751239|ref|XP_001957934.1| GF23767 [Drosophila ananassae]
 gi|190625216|gb|EDV40740.1| GF23767 [Drosophila ananassae]
          Length = 941

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLS--ANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L+S  A    P K +F HGF +  KG K+SKSLGNVI P
Sbjct: 585 ADLYLEGYD--QFTGWFQSSLLMSIAARDCAPYKALFVHGFTVDEKGYKMSKSLGNVISP 642

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G D LR+++ 
Sbjct: 643 KQITKKYGTDVLRWWVA 659



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N Q H+GHA   I+ D+  R     G  V +  G D HG  I  KA   A     + +
Sbjct: 85  YANGQLHMGHAVNKILKDITLRQRVAHGQQVNYVPGWDCHGLPIELKATSAAAGQNALEI 144

Query: 74  DQNSRNF 80
            Q SR+F
Sbjct: 145 RQKSRSF 151


>gi|322823230|gb|EFZ29025.1| valyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 975

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 12/109 (11%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+  + D    KF+P +L   G DIL F    W A ++  
Sbjct: 487 DPD-VLDTWFSSAMWPYSTLGWPGDTD-DMHKFFPGNLMETGHDILFF----WVARMVMT 540

Query: 283 NL----PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           +L     LP  +VF H  +  K GEK+SKS GNVIDP+ +I  + ++ L
Sbjct: 541 SLHFTGKLPFSEVFLHAMVRDKNGEKMSKSKGNVIDPLFIINGITLEGL 589



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 14/77 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH+    + D L RFHR+ G + L+  GTD           +AG+ T+V V++  R  
Sbjct: 60  HLGHSLTGAVQDTLIRFHRMKGDNTLYVPGTD-----------HAGIATQVVVEK--RLL 106

Query: 81  RDMADVL-DISYDDFIR 96
           R+      D+  ++F++
Sbjct: 107 RESGKTRHDLGREEFLK 123


>gi|322388914|ref|ZP_08062506.1| isoleucine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140297|gb|EFX35810.1| isoleucine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++K  
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKCY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|257791308|ref|YP_003181914.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475205|gb|ACV55525.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 948

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 12/109 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           I+ VW ++  ++   T  L + +    +F PAD+++ G D    H  ++ + LL++    
Sbjct: 543 ILDVWWESGVSH---TSVLKHREAEGLRF-PADMYLEGSDQ---HRGWFQSSLLTSMGAY 595

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +P  K V   GF +  +G K+SKSLGN +DP EV+ + G D LR ++ 
Sbjct: 596 GVPPYKAVMHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSGADVLRLWVA 644



 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFV 73
           Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I    +   G      +
Sbjct: 60  YANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPDKMAKI 119

Query: 74  DQNS--RNFRDMAD-VLDISYDDFIR 96
           DQ +  R  R+ A+  +D+  + F R
Sbjct: 120 DQPTLRRLCREWAEKYVDVQREGFKR 145


>gi|218530554|ref|YP_002421370.1| isoleucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522857|gb|ACK83442.1| isoleucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 991

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 17/91 (18%)

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
           T  YL+  D  +  F  + L   G    R HA Y               V +HGF+L  K
Sbjct: 613 TVMYLEGSDQHRGWFQSSLLESCGT---RGHAPY-------------DVVLTHGFVLDAK 656

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+SKS GNV+ P  VI+E G D LR ++ 
Sbjct: 657 GEKMSKSRGNVVAPQNVIKESGADILRLWVA 687



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 12/104 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R +  +     Y N   HIGHA   I+ DV+ R     G D  +  G D HG  I   
Sbjct: 57  KGRPRFVLHDGPPYANGNIHIGHALNKILKDVVVRSQGALGRDANYVPGWDCHGLPIEWK 116

Query: 59  ------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                 AK      V    F  Q  R F   A+ L+I  D+F R
Sbjct: 117 IEEQYRAKGKNKDEVPVLEF-RQQCRAF--AAEWLNIQRDEFKR 157


>gi|212696395|ref|ZP_03304523.1| hypothetical protein ANHYDRO_00932 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676673|gb|EEB36280.1| hypothetical protein ANHYDRO_00932 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 1076

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           ++PD    ++ VW D+     +   Y          ++PAD    G D  R  F+++   
Sbjct: 553 RVPD----VIDVWFDSGAMPFSQVHYPFAKGEDFENYFPADFICEGIDQTRGWFYSLMAI 608

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +++   P  K V  +  ++ K G+K+SKS GN ++P E+ ++ G DA+R++ +    C
Sbjct: 609 STIITGKAPY-KNVLVNDLVVDKNGQKMSKSKGNTLNPFELFDKYGADAVRFYSLYVSPC 667

Query: 336 GKDGFYDKDGL 346
                +D+ GL
Sbjct: 668 WVPTKFDEKGL 678


>gi|182681844|ref|YP_001830004.1| leucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130165|sp|Q87C65|SYL_XYLFT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238691042|sp|B2I5T5|SYL_XYLF2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|182631954|gb|ACB92730.1| leucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578093|gb|ADN62062.1| leucyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 879

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  Y 
Sbjct: 95  KNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 155 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 206



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 587 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 633

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 634 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 663


>gi|317490445|ref|ZP_07948927.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910438|gb|EFV32065.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 948

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 12/109 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           I+ VW ++  ++   T  L + +    +F PAD+++ G D    H  ++ + LL++    
Sbjct: 543 ILDVWWESGVSH---TSVLKHREAEGLRF-PADMYLEGSDQ---HRGWFQSSLLTSMGAY 595

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +P  K V   GF +  +G K+SKSLGN +DP EV+ + G D LR ++ 
Sbjct: 596 GVPPYKAVMHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSGADVLRLWVA 644



 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFV 73
           Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I    +   G      +
Sbjct: 60  YANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPDKMAKI 119

Query: 74  DQNS--RNFRDMAD-VLDISYDDFIR 96
           DQ +  R  R+ A+  +D+  + F R
Sbjct: 120 DQPTLRRLCREWAEKYVDVQREGFKR 145


>gi|296272343|ref|YP_003654974.1| valyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096517|gb|ADG92467.1| valyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 882

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 12/94 (12%)

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKIS 304
           +A F+P  L + G DI+ F    W A ++         LP  + ++ H  +  + G K+S
Sbjct: 491 EADFYPNSLLITGFDIMFF----WVARMMMMGEHFKKELPF-EDIYMHALVRDEHGAKMS 545

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           KS GNVIDP++++EE   D +R+ L      G+D
Sbjct: 546 KSKGNVIDPLDMVEEHSADIIRFTLAYLAVQGRD 579



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK 70
           HIGHA    + D++ R+ R+DG   L+  GTD  G   Q + +    A  TTK
Sbjct: 53  HIGHALTFTLQDIITRYKRMDGFKALWQPGTDHAGIATQNVVEKQLLAEGTTK 105


>gi|46852147|ref|NP_060530.3| isoleucyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|94730583|sp|Q9NSE4|SYIM_HUMAN RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
 gi|33112162|gb|AAP94033.1| isoleucine tRNA synthetase [Homo sapiens]
 gi|119613711|gb|EAW93305.1| isoleucine-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|187952611|gb|AAI37439.1| Isoleucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 1012

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ + AQN  
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQN-- 174

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 175 -LSAMEIRKKARSFAKAA--IEKQKSAFIR 201



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 645 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWVADS 703

Query: 331 ---REIACG 336
               E+A G
Sbjct: 704 NVFTEVAIG 712


>gi|325831364|ref|ZP_08164618.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325486618|gb|EGC89066.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 948

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 12/109 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           I+ VW ++  ++   T  L + +    +F PAD+++ G D    H  ++ + LL++    
Sbjct: 543 ILDVWWESGVSH---TSVLKHREAEGLRF-PADMYLEGSDQ---HRGWFQSSLLTSMGAY 595

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +P  K V   GF +  +G K+SKSLGN +DP EV+ + G D LR ++ 
Sbjct: 596 GVPPYKAVMHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSGADVLRLWVA 644



 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVTTKVFV 73
           Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I    +   G      +
Sbjct: 60  YANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPDKMAKI 119

Query: 74  DQNS--RNFRDMAD-VLDISYDDFIR 96
           DQ +  R  R+ A+  +D+  + F R
Sbjct: 120 DQPTLRRLCREWAEKYVDVQREGFKR 145


>gi|323497796|ref|ZP_08102810.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317143|gb|EGA70140.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 942

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYSVVDAREEYNGASA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|322375668|ref|ZP_08050180.1| isoleucine--tRNA ligase [Streptococcus sp. C300]
 gi|321279376|gb|EFX56417.1| isoleucine--tRNA ligase [Streptococcus sp. C300]
          Length = 926

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|255003539|ref|ZP_05278503.1| valyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
          Length = 814

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 16/157 (10%)

Query: 255 FWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +P DL     +I+R  A Y    ++  +  +P    + S   +     K+SKS GN +D
Sbjct: 492 LFPTDLRAQSHEIIRSWAFYTMLKSYYHNGEIPWQNIMISGWCLAEDKTKMSKSKGNAMD 551

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMIL 370
           P   ++  G D++RY+  +    G D  + ++ LK  +R+   L N      S+ V+  L
Sbjct: 552 PESTLDLYGADSVRYWAAKS-RLGADTVFSEEVLKTGRRLTTKLWNA-----SKFVATFL 605

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +D       P A T +  + L + S++ + +  N +N
Sbjct: 606 RD------NPPAGTTAAPTDLWILSKLHKAVAHNTEN 636


>gi|284034987|ref|YP_003384917.1| isoleucyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283814280|gb|ADB36118.1| isoleucyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 1148

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 7/109 (6%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F  ++  A +L  ++   K V S G +L K G K+SK LGN 
Sbjct: 644 KAFPADFISEGVDQTRGWFFTLHAIAGMLFDSVAF-KNVVSTGLVLDKNGNKMSKRLGNA 702

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL---KKRVNADLAN 356
           ++P E +++ G DA R++++       +  ++ DG+   ++++   L+N
Sbjct: 703 VNPFETLDKYGADATRWYMITNAEPWDNLKFNTDGIGEVQRKLFGTLSN 751


>gi|225551673|ref|ZP_03772617.1| isoleucyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371700|gb|EEH01126.1| isoleucyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKNLMILLAPFIPFITEEIYQNL 772


>gi|194246835|ref|YP_002004474.1| leucyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807192|emb|CAP18633.1| Leucyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 811

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 3/118 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+A+  H+GH      +D+ +RF ++ G +VL   G D  G    + 
Sbjct: 32  DKKKFYCLDMFPYPSAEGLHVGHIEGYTASDIFSRFKKMQGYNVLHPFGWDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   G   + F  +N +NF++    +   + +D  + T++   +   + ++KK+  K 
Sbjct: 92  ALKTGNNPRNFTYENIKNFKEQIIKMGKGVDWDKELATSDNDFYHWTQWIFKKLYQKN 149


>gi|114778439|ref|ZP_01453284.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551283|gb|EAU53841.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 818

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 13/196 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE  Y      YP+   H+GH     + D +AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  REPYYCLVMFPYPSGNLHMGHVRNYCLGDAVARYKRMKGYNVLHPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR---ILWKKISDKGDIY 120
                   +   N    R     L +SY D+ R     H D  R    ++ ++  KG  Y
Sbjct: 92  KHNRPPAEWTYANIDQMRVQLKRLGLSY-DWSREIATCHPDYYRWEQWMFTRLMQKGLAY 150

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +     W         N+  V    DG  +     PV     + +F R++ Y ++LL+ 
Sbjct: 151 QQDAEVNWCDPCHTVLANEQVV----DGVCWRCD-TPVIRKNLKQWFIRITDYAEELLAD 205

Query: 180 YES---HPEFILPIER 192
            +S    PE ++ ++R
Sbjct: 206 LDSLSGWPEKVVGMQR 221



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K + + G +L  G K+SKS GN +DP  +IE  G D  R F +
Sbjct: 566 KNLLTQGMVLKDGTKMSKSKGNTVDPKAIIERFGADTARLFTL 608


>gi|67970170|dbj|BAE01429.1| unnamed protein product [Macaca fascicularis]
          Length = 940

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG         ++ + AQN  
Sbjct: 45  YANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQN-- 102

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 103 -LSAMEIREKARSFAKAA--IEKQKSAFIR 129



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 522 QDILDIWFDSGTSW---SHVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVATRK 572

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 573 KAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWVADS 631

Query: 331 ---REIACG 336
               E+A G
Sbjct: 632 NVFTEVAIG 640


>gi|319947480|ref|ZP_08021712.1| isoleucine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746420|gb|EFV98681.1| isoleucine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+ + L +  D  +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLVEYLKLCRDYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++++KG IY+G    ++S   E+   + E+
Sbjct: 169 EMANKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|222624062|gb|EEE58194.1| hypothetical protein OsJ_09140 [Oryza sativa Japonica Group]
          Length = 977

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 14/110 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL F    W A +   
Sbjct: 541 DPD-VLDTWFSSGLFPLTVLGWPDDTADVKA-FYPGSVLETGHDILFF----WVARMVMM 594

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
              L  ++P  +KV+ H  I    G K+SKSLGNVIDP++VI  + ++ L
Sbjct: 595 GMQLGGDVPF-QKVYLHPMIRDAHGCKMSKSLGNVIDPVDVINGIPLEGL 643


>gi|114572728|ref|XP_514209.2| PREDICTED: mitochondrial isoleucine tRNA synthetase isoform 3 [Pan
           troglodytes]
          Length = 1012

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ + AQN  
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQN-- 174

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 175 -LSAMEIRKKARSFAKAA--IEKQKSAFIR 201



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 645 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPAVVVNGGQDQSKEPPYGADVLRWWVADS 703

Query: 331 ---REIACG 336
               E+A G
Sbjct: 704 NVFTEVAIG 712


>gi|71276301|ref|ZP_00652579.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Dixon]
 gi|71162909|gb|EAO12633.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Dixon]
          Length = 879

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  Y 
Sbjct: 95  KNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 155 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 206



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 587 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 633

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 634 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 663


>gi|88810475|ref|ZP_01125732.1| valyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792105|gb|EAR23215.1| valyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 919

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 54/294 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+    +  + +++P  + V G DI+ F    W A ++   L  
Sbjct: 445 VLDTWFSSALWPFSTLGWPQQTEALR-RYYPTSVLVTGFDIIFF----WVARMIMLGLRF 499

Query: 285 --PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEV-------------------- 320
              +P ++V+ HG +    G+K+SKS GNV+DP+++I+ +                    
Sbjct: 500 MGDVPFREVYIHGLVRDADGQKMSKSKGNVLDPLDIIDGIELDALITKRTTGLMQPQLAP 559

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+        G+D  +D+  ++   N    N + N  +
Sbjct: 560 MIERATRTHYPSGIVAHGSDALRFTFASLATTGRDIVFDRGRVEGYRN--FCNKLWN-AA 616

Query: 364 RSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R V M  + +D G+          D  I+S   R  QEI + +    +  A   +   V 
Sbjct: 617 RYVLMNTQGHDAGLEGGAIKLALPDRWIISRLQRAEQEIIDGIHGYRMDHAAQALYEFVW 676

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   D Y +  K       +P +        V V+  +  L   F+P +  +I+
Sbjct: 677 DEYCDWYLELSKATLQHSDDPAQLRGTRRTLVRVLETVLRLAHPFIPFITEEIW 730



 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA++  I D+L R+HR+ G D L+  G D  G   Q + +   NA   T+       
Sbjct: 47  HMGHAFQDTIMDILIRYHRMQGRDTLWQPGIDHAGIATQMVVERQLNAADMTRHDLGRAA 106

Query: 72  FVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+D+            ++  R +   +D   + F  T +       R ++ ++ D+G IY
Sbjct: 107 FIDRIWQWKAQSGGTITQQLRRLGASVDWQRERF--TMDAGLSAAVREVFVQLYDEGIIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166


>gi|310817804|ref|YP_003950162.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309390876|gb|ADO68335.1| Valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 877

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKG-EKISKSLGNVI 311
           K +PAD+     +I+R  A Y  A  +     +P + V   G++L    +K+SKS GNV+
Sbjct: 533 KLFPADIRPQSHEIIRTWAFYTVAKAMLHEDTIPWRDVLISGWVLDPDRKKMSKSRGNVV 592

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSM 368
            P  +IE  G DA+RY+       G D  +D+   K  KR+   L N    +VS++  +
Sbjct: 593 TPTHLIEAYGADAVRYWSA-SARLGVDTAFDEKVFKVGKRLVTKLFNASKYVVSQTAQV 650



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          H+GH +     D+ ARF R+ G ++ +  G D++G    +  QN
Sbjct: 44 HVGHIFSYTHTDITARFQRMLGKNIFYPMGWDDNGLPTERRVQN 87


>gi|94986597|ref|YP_594530.1| leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988802|sp|Q1MS17|SYL_LAWIP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94730846|emb|CAJ54208.1| Leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 835

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA 
Sbjct: 34  KKKYYVLEMWPYPSGNIHMGHVRNYSIGDVIARIKRMQGYNVLHPMGWDAFGLPAELAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
                   +   N    R     L  SYD    I T +  ++   ++ +    +KG +Y 
Sbjct: 94  KHHTQPADWTYTNINEMRAQLKRLGYSYDWQREIATCDPDYYQWEQLFFVDCFEKGLVYR 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K     W    +    N+  +    +G  +    + +Q  E   +F +++ Y ++LL
Sbjct: 154 KKAPQNWCPSCNTVLANEQVI----EGSCWRCDTSIIQ-KELTQWFLKITDYAEELL 205



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 10/109 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLP-KKVFSHGFILH 298
           D S AK+W   D ++ G +    H +Y   F         L +N+  P  K+ + G ++ 
Sbjct: 524 DTSIAKYWLNVDQYIGGVEHAILHLLYSRFFTKLLRDLGYLPSNINEPFAKLLTQGMVIK 583

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            G K+SKS GN++DP ++I   G D +R F +      +D  +   G++
Sbjct: 584 DGSKMSKSKGNIVDPNQMINIYGADTIRLFCLFAAPPERDFDWSDSGIE 632


>gi|86159149|ref|YP_465934.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775660|gb|ABC82497.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 858

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 17/178 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA   G 
Sbjct: 64  YVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGFDALGLPAENAAIKDGR 123

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG--- 122
                  +N  +FR     L  S+  D  + T +  ++   +  + K+ +KG  Y+    
Sbjct: 124 HPAERTRENVVSFRAEMKRLGYSFDWDRELVTADASYYRWNQWFFLKMLEKGIAYRRQGK 183

Query: 123 ---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              C      + +E   +D+   +           +PV       + FR++AY  +LL
Sbjct: 184 VNWCTGCQTVIANEQVVDDNRCERCG---------SPVVEKIHPEWAFRITAYAQQLL 232


>gi|325697075|gb|EGD38962.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|320581330|gb|EFW95551.1| Mitochondrial isoleucyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 990

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 50/281 (17%)

Query: 228 MYVWIDA------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           M VW D+      +  +L +TG L     + A+ + AD+++ G D    H  ++ + +L+
Sbjct: 575 MDVWFDSGSSWTLVEQFLESTGLLPQ---AVARGYLADVYLEGSDQ---HRGWFQSSVLT 628

Query: 282 ---ANLP-----LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE--------EVGVD 323
              A  P     LP  K+ +HGF L  KG+K+SKSLGN I P++++E         +G+D
Sbjct: 629 KIGATAPGEPAVLPYGKIITHGFTLDEKGDKMSKSLGNTIVPVDIVEGNKAKKVPGLGID 688

Query: 324 ALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            LR ++ +     ++A G         + K++       +GN+     ++     D M  
Sbjct: 689 GLRLWVAQADYTSDMAVGPVILNRVADVVKKLRFTFRFLLGNIGDMEQTVDYAQLDAM-- 746

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD---RYFDAQK-PW 434
                   D  ILS  +   ++ R+  +     + +  +  LV+ VD    YFD +K P 
Sbjct: 747 --------DRYILSRLASFEKKARQCYEAHNYSKIIKDMNQLVN-VDLSSLYFDIRKDPL 797

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +  +  +   V VEV++ L  +L   +P +A + ++
Sbjct: 798 YTDFADSLKRRSTQTVFVEVLKVLTSVLAPIMPIMAQEAWN 838



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 24/48 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           Y N   HIGHA   I+ D++ RF  L G  V +  G D HG  I   A
Sbjct: 69  YANGDLHIGHALNKILKDIIVRFELLSGKKVHYRPGWDCHGLPIELKA 116


>gi|315613567|ref|ZP_07888474.1| isoleucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314258|gb|EFU62303.1| isoleucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+ + L +  D  +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLVEYLKLCRDYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|282879442|ref|ZP_06288180.1| valine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298440|gb|EFA90871.1| valine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 879

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 31/251 (12%)

Query: 245 LDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFI 296
           +++PD  +  ++   ADL + G DI+ F    W A ++ A       +P  K V+  G +
Sbjct: 474 INHPDNEEINYYYPTADL-ITGPDIIFF----WVARMIMAGYEYKGQMPF-KHVYFTGIV 527

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
             K G K+SKSLGN  DPI +I++ G D +R  ++     G D  +D+   ++  N    
Sbjct: 528 RDKLGRKMSKSLGNSPDPISLIDQYGADGVRMGMMLSAPAGNDILFDESLCEQGRN--FN 585

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N         + D +     P A   +     +      +E+ +      I  AL 
Sbjct: 586 NKIWNAFRLVKGWEVVDGE----QPNACKLATAWFEAKLRTTNEEVNDLFAKYRISEALM 641

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ----LAILLQAFVPKLAN 471
            V  L      ++D    W L+   P   + +   T E   +    L  +L  F+P +  
Sbjct: 642 VVYRL------FWDEFSSWYLEMVKPAYGTPIDRTTYEATLKYFDVLLKMLHPFMPFITE 695

Query: 472 KIFDILFVADE 482
           +++  L+   E
Sbjct: 696 ELWQHLYTRAE 706


>gi|257877587|ref|ZP_05657240.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811753|gb|EEV40573.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 929

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELT----FPADMYLEGSDQYRGWFNSSITTSVAINGVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN I P +VI ++G D LR ++
Sbjct: 574 PY-KAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV 618



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGH+   I  D++ R   + G    +  G D HG  I +   N G+  K    
Sbjct: 56  YANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGIKRKEMSL 115

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +    D  +  +I  T        R+   K+++KG 
Sbjct: 116 AEYRKKCEEYALTQVDTQRADFKRLGVSGDWEH-PYITLTPDYEAAEIRVF-GKMAEKGY 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 174 IYKGLKPIYWSPSSESSLAEAEI 196


>gi|254561520|ref|YP_003068615.1| isoleucine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254268798|emb|CAX24759.1| isoleucine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 991

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 17/91 (18%)

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
           T  YL+  D  +  F  + L   G    R HA Y               V +HGF+L  K
Sbjct: 613 TVMYLEGSDQHRGWFQSSLLESCGT---RGHAPY-------------DVVLTHGFVLDAK 656

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+SKS GNV+ P  VI+E G D LR ++ 
Sbjct: 657 GEKMSKSRGNVVAPQNVIKESGADILRLWVA 687



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R +  +     Y N   HIGHA   I+ DV+ R     G D  +  G D HG  I   
Sbjct: 57  KGRPRFVLHDGPPYANGNIHIGHALNKILKDVVVRSQGALGRDANYVPGWDCHGLPIEWK 116

Query: 59  ------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                 AK      V    F  Q  R F   A+ L I  D+F R
Sbjct: 117 IEEQYRAKGKNKDEVPVLEF-RQQCRAF--AAEWLSIQRDEFKR 157


>gi|240138137|ref|YP_002962609.1| leucine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008106|gb|ACS39332.1| leucine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 875

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N    R     + +S D
Sbjct: 106 ERKVNPREWTYANIATMRGQLQSMGLSLD 134



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++             
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQG------------ 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R V  + +   G     G    +D  +     + L  + E+++    +R +A + +L
Sbjct: 691 -AARFVQRVWRLVHGATAANGPGGTADAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVD 425
            + +D
Sbjct: 750 ANALD 754


>gi|159030898|emb|CAO88579.1| ileS [Microcystis aeruginosa PCC 7806]
          Length = 952

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 35/193 (18%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---ANL 284
           M VW D+ +++         P+ S    +PAD+++ G D    H  ++ + LL+   AN 
Sbjct: 533 MDVWFDSGSSWNAVANA--RPELS----YPADMYLEGSDQ---HRGWFQSSLLTSVAANG 583

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
             P K V +HGF+L  +G K+SKSLGNVIDP  +I            GVD +R + V  +
Sbjct: 584 IAPYKTVLTHGFVLDEQGRKMSKSLGNVIDPNVIINGGKDQKKEPAYGVDVIRLW-VSSV 642

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDE 388
               D    ++ LK+ V  D+ N I N  +R +   L D+D   P   A       E D 
Sbjct: 643 DYTNDVNIGQNILKQLV--DIRNKIRN-TARFLLGSLNDFD---PVKDAVAYEDLPEIDR 696

Query: 389 SILSVCSRVLQEI 401
            +L   S V  E+
Sbjct: 697 YMLHRISEVFTEV 709



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------KAAQNAGV 67
           Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I        K+++  G+
Sbjct: 61  YANGSLHIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGL 120

Query: 68  T 68
           T
Sbjct: 121 T 121


>gi|163851748|ref|YP_001639791.1| isoleucyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163663353|gb|ABY30720.1| isoleucyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 991

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 17/91 (18%)

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
           T  YL+  D  +  F  + L   G    R HA Y               V +HGF+L  K
Sbjct: 613 TVMYLEGSDQHRGWFQSSLLESCGT---RGHAPY-------------DVVLTHGFVLDAK 656

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+SKS GNV+ P  VI+E G D LR ++ 
Sbjct: 657 GEKMSKSRGNVVAPQNVIKESGADILRLWVA 687



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 12/104 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R +  +     Y N   HIGHA   I+ DV+ R     G D  +  G D HG  I   
Sbjct: 57  KGRPRFVLHDGPPYANGNIHIGHALNKILKDVVVRSQGALGRDANYVPGWDCHGLPIEWK 116

Query: 59  ------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                 AK      V    F  Q  R F   A+ L+I  D+F R
Sbjct: 117 IEEQYRAKGKNKDEVPVLEF-RQQCRAF--AAEWLNIQRDEFKR 157


>gi|146182318|ref|XP_001024345.2| leucyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146143873|gb|EAS04100.2| leucyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 810

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y+ +   YP+   H+GHA    I+DV++RF ++ G +V+   G D  G      A+
Sbjct: 63  QEKYYVLSQFPYPSGNLHMGHARVYYISDVISRFEKMKGKNVINPMGWDAFGL----PAE 118

Query: 64  NAGVTTKVFVDQNSRNFRDMAD 85
           NA +   + + Q  + F    D
Sbjct: 119 NAAIQRNIVILQIQKLFTCRED 140


>gi|16125569|ref|NP_420133.1| valyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234318|ref|YP_002516754.1| valyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81535578|sp|Q9A8N3|SYV_CAUCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13422663|gb|AAK23301.1| valyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220963490|gb|ACL94846.1| valyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 906

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 13/119 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+ +     + +F+P    V G DI+     +W A ++   +  
Sbjct: 472 VLDTWFSSALWPFSTLGWPEKTSDLE-RFYPTSTLVTGFDII----FFWVARMMMMGIHF 526

Query: 285 ----PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               P  K+VF +  +   KG K+SKS GNV+DP+ +I+E+G DA+R+ L       +D
Sbjct: 527 MGEAPF-KQVFINALVRDEKGAKMSKSKGNVMDPLILIDELGCDAVRFTLTAMSGQARD 584



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 31/95 (32%)

Query: 16  PNAQP--------------HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           PNA+P              HIGHA    + DVL RFHR+ G   L+  GTD         
Sbjct: 31  PNAEPFVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTD--------- 81

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             +AG+ T++ V+      R +A   +I   D  R
Sbjct: 82  --HAGIATQMVVE------RQLAAAGNIGRRDMGR 108


>gi|322389020|ref|ZP_08062590.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144325|gb|EFX39733.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  +  ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWDH-PYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|315225185|ref|ZP_07867002.1| leucine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944868|gb|EFS96900.1| leucine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 945

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D++AR+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIVARYKRHKGFNVLHPQGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    +   QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPALTTAQNIARYREQLDKMGFSFD 119



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 41/181 (22%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P ++ E+ G D LR +         + F       K  N    +G+ N
Sbjct: 719 EKMSKSKYNVVNPDDICEQYGADTLRLY---------EMFLGPLEQAKPWNTAGISGVYN 769

Query: 361 LVSRSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + +   +   D    +    PTP         +L    + ++++ E+++N   + +++Q
Sbjct: 770 FLRKLWRLYFNDNGWQVTDEAPTP--------EMLKALHKTIKKVNEDIENFSFNTSVSQ 821

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  V+E+           LK  + D           V+  L++L+  F P +A +++  
Sbjct: 822 FMICVNELS---------SLKCHHRD-----------VLAPLSVLVAPFAPHIAEELWKR 861

Query: 477 L 477
           L
Sbjct: 862 L 862


>gi|240138912|ref|YP_002963387.1| isoleucine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008884|gb|ACS40110.1| isoleucine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 991

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 17/91 (18%)

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
           T  YL+  D  +  F  + L   G    R HA Y               V +HGF+L  K
Sbjct: 613 TVMYLEGSDQHRGWFQSSLLESCGT---RGHAPY-------------DVVLTHGFVLDAK 656

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+SKS GNV+ P  VI+E G D LR ++ 
Sbjct: 657 GEKMSKSRGNVVAPQNVIKESGADILRLWVA 687



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 12/104 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K R +  +     Y N   HIGHA   I+ DV+ R     G D  +  G D HG  I   
Sbjct: 57  KGRPRFVLHDGPPYANGNIHIGHALNKILKDVVVRSQGALGRDANYVPGWDCHGLPIEWK 116

Query: 59  ------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                 AK      V    F  Q  R F   A+ L+I  D+F R
Sbjct: 117 IEEQYRAKGKNKDEVPVLEF-RQQCRAF--AAEWLNIQRDEFKR 157


>gi|188581532|ref|YP_001924977.1| isoleucyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345030|gb|ACB80442.1| isoleucyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 993

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 17/91 (18%)

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
           T  YL+  D  +  F  + L   G    R HA Y               V +HGF+L  K
Sbjct: 613 TVMYLEGSDQHRGWFQSSLLESCGT---RGHAPY-------------DVVLTHGFVLDAK 656

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+SKS GNV+ P  VI+E G D LR ++ 
Sbjct: 657 GEKMSKSRGNVVAPQNVIKESGADILRLWVA 687


>gi|7678804|dbj|BAA95147.1| mitochondrial isoleucine tRNA synthetase [Homo sapiens]
          Length = 993

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ + AQN  
Sbjct: 98  YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQN-- 155

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 156 -LSAMEIRKKARSFAKAA--IEKQKSAFIR 182



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 575 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 625

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 626 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWVADS 684

Query: 331 ---REIACG 336
               E+A G
Sbjct: 685 NVFTEVAIG 693


>gi|329114391|ref|ZP_08243153.1| Isoleucyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696467|gb|EGE48146.1| Isoleucyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 971

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 13/115 (11%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           PADL++ G D    H  ++ + LL +     +   K V ++GF+L  +G K+SKSLGNVI
Sbjct: 589 PADLYLEGSDQ---HRGWFQSSLLESVGTRGVSPYKAVVTNGFVLDEQGRKMSKSLGNVI 645

Query: 312 DPIEVIEEVGVDALRYFLVR-----EIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            P +V + +G D LR ++V      ++  GK+    +  L +R+   L   +G L
Sbjct: 646 APQDVNDSLGADVLRLWVVNSDTNDDLRIGKEILKQQGELYRRLRNTLRWLLGAL 700



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I  DV+ R HR+ G  V +  G D HG  I
Sbjct: 72  YANGHLHIGHAMNKINKDVINRAHRMSGYGVRYVPGWDCHGLPI 115


>gi|254560699|ref|YP_003067794.1| leucine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254267977|emb|CAX23845.1| leucine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 875

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N    R     + +S D
Sbjct: 106 ERKVNPREWTYANIATMRGQLQSMGLSLD 134



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++             
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQG------------ 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R V  + +   G     G    +D  +     + L  + E+++    +R +A + +L
Sbjct: 691 -AARFVQRVWRLVHGATAANGPGGTADAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVD 425
            + +D
Sbjct: 750 ANALD 754


>gi|114572730|ref|XP_001172664.1| PREDICTED: mitochondrial isoleucine tRNA synthetase isoform 2 [Pan
           troglodytes]
          Length = 981

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ + AQN  
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQN-- 174

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 175 -LSAMEIRKKARSFAKAA--IEKQKSAFIR 201



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 645 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPAVVVNGGQDQSKEPPYGADVLRWWVADS 703

Query: 331 ---REIACG 336
               E+A G
Sbjct: 704 NVFTEVAIG 712


>gi|326334575|ref|ZP_08200786.1| leucine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325693344|gb|EGD35272.1| leucine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 945

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D++AR+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIVARYKRHKGFNVLHPQGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    +   QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPALTTAQNIARYREQLDKMGFSFD 119



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 41/181 (22%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P ++ E+ G D LR +         + F       K  N    +G+ N
Sbjct: 719 EKMSKSKYNVVNPDDICEQYGADTLRLY---------EMFLGPLEQAKPWNTAGISGVYN 769

Query: 361 LVSRSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + +   +   D    +    PTP         +L    + ++++ E+++N   + +++Q
Sbjct: 770 FLRKLWRLYFNDNGWQVTDEAPTP--------EMLKALHKTIKKVNEDIENFSFNTSVSQ 821

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  V+E+                    ST+     +V+  LA+L+  F P +A +++  
Sbjct: 822 FMICVNEL--------------------STLKCHHRDVLTPLAVLVAPFAPHIAEELWKR 861

Query: 477 L 477
           L
Sbjct: 862 L 862


>gi|270292379|ref|ZP_06198590.1| isoleucine--tRNA ligase [Streptococcus sp. M143]
 gi|270278358|gb|EFA24204.1| isoleucine--tRNA ligase [Streptococcus sp. M143]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|260775152|ref|ZP_05884050.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608853|gb|EEX35015.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 942

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYSVVDAREEYNGASA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG      
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 56  --QKIAKAAQNAGVTTKVFVDQNSRNF 80
             +K+ K  Q   VT   F  Q  R++
Sbjct: 106 VEKKVGKPGQK--VTAAEF-RQKCRDY 129


>gi|194227336|ref|XP_001488103.2| PREDICTED: isoleucyl-tRNA synthetase 2, mitochondrial [Equus
           caballus]
          Length = 1012

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 22/118 (18%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++ +     D           ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSWFSVLPGTDQR---------ADLYLEGKDQLGGWFQSSLLTSVAARK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  K V  HGF L  KGEK+SKSLGNV+DP  VI            G D LR+++ 
Sbjct: 645 KAPF-KTVVVHGFTLGEKGEKMSKSLGNVVDPDVVINGGQDQSKEPPYGADVLRWWVA 701



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-----AKAAQNAGVTT 69
           Y N  PH+GHA   I+ D+  RFH + G  + F  G D HG  I     ++    A   +
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMRGSKIHFVPGWDCHGLPIELKVLSELGGKAQNLS 176

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIR 96
            V + + +R+F   A  ++     FIR
Sbjct: 177 AVEIREKARSFAKAA--IEKQKSAFIR 201


>gi|195380978|ref|XP_002049233.1| GJ20865 [Drosophila virilis]
 gi|194144030|gb|EDW60426.1| GJ20865 [Drosophila virilis]
          Length = 1048

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     +  G+ DN    +A F+P  L   G DIL F    W A +      L
Sbjct: 577 VLDTWFSSGLFPFSVFGWPDNTPDLQA-FYPTSLLETGHDILFF----WVARMVFFGQKL 631

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REI 333
              LP  K+V+ H  +    G K+SKSLGNVIDP++VI  + ++ L   L+      REI
Sbjct: 632 LGKLPF-KEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGISLEGLHEQLIGSNLDPREI 690

Query: 334 ACGKDG 339
              K G
Sbjct: 691 EKAKLG 696


>gi|167527031|ref|XP_001747848.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773597|gb|EDQ87235.1| predicted protein [Monosiga brevicollis MX1]
          Length = 593

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%)

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-IMYVWIDALTNYLTTTGY 244
           F  P  ++  V++  +   +D  L +   D+   +   P+  ++  W  +        G+
Sbjct: 401 FTAPCGKQEYVVADDEGTARDEVLQQYGADFAASVTLTPEEDVLDTWFSSGLYPFAALGW 460

Query: 245 LDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH----- 298
            ++ PD   AKF+P  L   G DIL     +W A ++  +L L  +V     +LH     
Sbjct: 461 PESTPD--FAKFFPNTLLETGSDIL----FFWVARMVMLSLALTDQVPFRQVLLHPLVRD 514

Query: 299 -KGEKISKSLGNVIDPIEVI 317
            +G K+SKS+GNVIDP++VI
Sbjct: 515 GQGRKMSKSVGNVIDPLDVI 534



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA  + + D LAR+HR+ G +VL+  G D           +AG+ T+  V+++
Sbjct: 12 HLGHALTIAVQDALARWHRMLGHEVLWLPGAD-----------HAGIATQTVVEKH 56


>gi|70930239|ref|XP_737059.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56512129|emb|CAH78072.1| hypothetical protein PC104447.00.0 [Plasmodium chabaudi chabaudi]
          Length = 311

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)

Query: 248 PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKIS 304
           P  S  K +PAD    G D  R  F+ +   + LL    P  K +  +G IL   G+K+S
Sbjct: 119 PMESFNKIFPADFIAEGLDQTRGWFYTLLVISTLLFDKAPF-KNLICNGLILASDGKKMS 177

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           K L N  DPI ++ + G D+LR +L+  +A   +    ++            G+  +V  
Sbjct: 178 KRLKNYPDPIYILNKYGADSLRLYLINSVAVRAENLKFQE-----------KGVNEIVKS 226

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +      +         +  S ++  +  ++ + +  +N+ +Q I  ++  +I LV
Sbjct: 227 FILPFYHSFRFFSQEVTRYETSYKTTFTFSNKYIYDNNDNIMDQWIFSSIQNLIKLV 283


>gi|324993400|gb|EGC25320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995288|gb|EGC27200.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327461674|gb|EGF08005.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327489527|gb|EGF21320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|294791206|ref|ZP_06756363.1| valine--tRNA ligase [Scardovia inopinata F0304]
 gi|294457677|gb|EFG26031.1| valine--tRNA ligase [Scardovia inopinata F0304]
          Length = 991

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 25/189 (13%)

Query: 257 PADLHVIGKDILR---FHAIYWPAFLLSANLPLPKKVFSHGFIL---HKGEKISKSLGNV 310
           P DL   G+DI+R   F ++   A+L +  LP      S G+IL   HK  K+SKS GNV
Sbjct: 569 PMDLRPQGQDIIRTWLFSSMD-RAYLENHQLPWTHTTLS-GWILDPDHK--KMSKSKGNV 624

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           + P E IE+ G DA+RY+       G D  Y+   +K  +   LA  + N    ++S+  
Sbjct: 625 VVPSEPIEKFGADAVRYWAA-SARLGTDAAYEISQMK--IGRRLAIKLLNATKFALSIGR 681

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           +D +  +      T     +     R             +  ALA VI   +E    +D 
Sbjct: 682 EDANHHVGQSARTTWKFSDVTVALDRS------------VMAALASVIDTATEALNAYDH 729

Query: 431 QKPWELKKT 439
            K  E+ +T
Sbjct: 730 AKALEIIET 738



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H+GH +     D++ARF R+ G DV +  G D++G    +  QN
Sbjct: 81  HVGHVFSYTHTDIIARFKRMQGFDVFYPMGWDDNGLPTERRVQN 124


>gi|293365883|ref|ZP_06612586.1| isoleucine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702288|ref|ZP_07639246.1| isoleucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291315561|gb|EFE56011.1| isoleucine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307624091|gb|EFO03070.1| isoleucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|224532448|ref|ZP_03673074.1| isoleucine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512620|gb|EEF82995.1| isoleucine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNISLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|108563773|ref|YP_628089.1| isoleucyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|122980437|sp|Q1CRK7|SYI_HELPH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|107837546|gb|ABF85415.1| isoleucyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 920

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQHRGWFQSSLLIGCVLNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+    ++++ G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVA 638


>gi|58039702|ref|YP_191666.1| isoleucyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819090|sp|Q5FRI6|SYI_GLUOX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58002116|gb|AAW61010.1| Isoleucyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 960

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 250 GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKS 306
           G +   +PADL++ G D  R  F +    +       P  K + ++GF++  +G K+SKS
Sbjct: 593 GQEGLNFPADLYLEGSDQHRGWFQSSLLESVGTMGVAPY-KALVTNGFVMDEQGRKMSKS 651

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV-----REIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           LGNV+ P +V E +G D LR +++      ++  G+D    +  L +R+   L   +G L
Sbjct: 652 LGNVVAPSDVTESLGADILRLWVLNSDTNEDLRIGQDILKQQGELYRRLRNTLRWLLGAL 711



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R    +     Y N   HIGHA   ++ DV+ R HR+ G +V +  G D HG  I
Sbjct: 70  KGRPVFTLHDGPPYANGHIHIGHALNKVMKDVINRAHRMSGYEVRYLPGWDCHGLPI 126


>gi|34499024|ref|NP_903239.1| isoleucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81654651|sp|Q7NS57|SYI_CHRVO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34104874|gb|AAQ61231.1| isoleucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 925

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 36/248 (14%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           WPADL++ G D  R  F +            P  K++ +HGF +  KG K+SKS GN I 
Sbjct: 553 WPADLYLEGSDQHRGWFQSSLKTGCATIGRAPY-KQLLTHGFTVDDKGYKMSKSKGNGIA 611

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMIL 370
           P E+   +G D LR ++      G D    ++ LK+   +   L N I  L+S      L
Sbjct: 612 PEEICGTLGADILRLWVASADYSG-DMSLSQEILKRTTESYRRLRNTIRFLLSN-----L 665

Query: 371 KDYDGM---IPTPGAFTESDESILSVCSRVLQE--IRENMQNQLIHRALAQVISLVSE-- 423
            D+D +   +P      E D+  L + +R +QE  + E       H  + +V+   SE  
Sbjct: 666 SDFDPLEHVVPLAN-MVEMDQYAL-LRAREVQEKVVGELYSRYAFHHVVQEVVGYCSEDL 723

Query: 424 --------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    DR +  +     +++    A T LY    + R L +++   +   A++ ++
Sbjct: 724 GAFYLDVIKDRLYTTKADSHARRS----AQTALY---HITRSLLLMVAPILCFTADEAWN 776

Query: 476 ILFVADEN 483
           +L  ++E 
Sbjct: 777 VLVDSEEE 784



 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   H+GHA   ++ D++ R   L G D  +  G D HG  I
Sbjct: 49  RPKFILHDGPPYANNDIHLGHAVNKVLKDIIVRSKTLAGFDAPYVPGWDCHGLPI 103


>gi|306824773|ref|ZP_07458117.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432984|gb|EFM35956.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|218529833|ref|YP_002420649.1| leucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522136|gb|ACK82721.1| leucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 875

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              V  + +   N    R     + +S D
Sbjct: 106 ERKVNPREWTYANIATMRGQLQSMGLSLD 134



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++             
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQG------------ 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R V  + +   G     G    +D  +     + L  + E+++    +R +A + +L
Sbjct: 691 -AARFVQRVWRLVHGATAANGPGGTADAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVD 425
            + +D
Sbjct: 750 ANALD 754


>gi|315229915|ref|YP_004070351.1| leucyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315182943|gb|ADT83128.1| leucyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 958

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          + + K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   
Sbjct: 27 RNKPKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGI 86

Query: 62 AQ 63
          A+
Sbjct: 87 AE 88



 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D     KD++  H      F +  ++ +      PK +  +G+   +G+K+SKS G
Sbjct: 593 WYPLDWRCSAKDLIPNHL----TFFVFNHVAIFDKKYWPKGIAVNGYGTLEGKKMSKSKG 648

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ I E G D +R +++
Sbjct: 649 NVLNFIDAINENGADVVRLYIM 670


>gi|29346216|ref|NP_809719.1| isoleucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81445223|sp|Q8A9K9|SYI_BACTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29338111|gb|AAO75913.1| isoleucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 1162

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N +D
Sbjct: 662 YPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNAVD 720

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           P   IE+ G D LR++++   +   +  +D DG+++
Sbjct: 721 PFTTIEKYGSDPLRWYMITNSSPWDNLKFDIDGIEE 756


>gi|218249227|ref|YP_002375329.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321297|ref|ZP_03796825.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|259511494|sp|B7J0S6|SYI_BORBZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218164415|gb|ACK74476.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226233329|gb|EEH32080.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNISLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|226329632|ref|ZP_03805150.1| hypothetical protein PROPEN_03542 [Proteus penneri ATCC 35198]
 gi|225202818|gb|EEG85172.1| hypothetical protein PROPEN_03542 [Proteus penneri ATCC 35198]
          Length = 962

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 115/300 (38%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +N +  K  F P ++ V G DI+ F    W A ++   +  
Sbjct: 483 VLDTWFSSALWTFSTLGWPENTEALKT-FHPTNVLVSGFDIIFF----WIARMIMMTMHF 537

Query: 287 PK-----------KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV-------------- 320
            K            V+  G I   +G+K+SKS GNV+DP+++I+ +              
Sbjct: 538 IKDEDGKPQVPFNTVYMTGLIRDEEGQKMSKSKGNVLDPLDMIDGISLENLLEKRTGNMM 597

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L    N    N 
Sbjct: 598 QPQMAEKIAKRTRKEFPEGIEAHGTDALRFTLAALASTGRDINWDMKRLSGYRN--FCNK 655

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  ++ D G       F+ +D  IL+  +  ++  RE + N     A   
Sbjct: 656 LWN-ASRFVLMNTEEQDCGYQGGEMTFSLADRWILAEFNNTVKAYREALDNYRFDIAAGI 714

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 715 LYEFTWNQFCDWYLELSKP-AVHKGNDAQKRAARHTLIEVLEGLLRLAHPIIPFITETIW 773



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
           H+GHA++  I D + R+ R+ G + L+ +GTD           +AG+ T++ V++
Sbjct: 60  HMGHAFQQTIMDTMIRYQRMQGKNTLWQSGTD-----------HAGIATQMVVER 103


>gi|198420837|ref|XP_002124251.1| PREDICTED: similar to valyl-tRNA synthetase 2, partial [Ciona
           intestinalis]
          Length = 775

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 12/124 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVID 312
           F+P  L   G DIL F       F L     LP ++V+ H  +    G K+SKSLGNVID
Sbjct: 322 FFPGTLLETGHDILFFWVARMVMFSLMLTDKLPFEEVYLHAMVRDAHGRKMSKSLGNVID 381

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGNLVSRSVSMI 369
           P++V+  + ++ L   L+        G  D+  +KK +     D  NGI    S ++   
Sbjct: 382 PLDVVTGISLEDLHKSLLT-------GNLDEKEVKKAMAGQKEDYPNGIPECGSDALRFA 434

Query: 370 LKDY 373
           L  Y
Sbjct: 435 LSAY 438


>gi|166363857|ref|YP_001656130.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082327|sp|B0JSP4|SYI_MICAN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166086230|dbj|BAG00938.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 952

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 27/161 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS---ANL 284
           M VW D+ +++         P+ S    +PAD+++ G D    H  ++ + LL+   AN 
Sbjct: 533 MDVWFDSGSSWNAVANA--RPELS----YPADMYLEGSDQ---HRGWFQSSLLTSVAANG 583

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREI 333
             P K V +HGF+L  +G K+SKSLGNVIDP  +I            GVD +R + V  +
Sbjct: 584 IAPYKTVLTHGFVLDEQGRKMSKSLGNVIDPNVIINGGKDQKKEPAYGVDVIRLW-VSSV 642

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
               D    ++ LK+ V  D+ N I N  +R +   L D+D
Sbjct: 643 DYTNDVNIGQNILKQLV--DIRNKIRN-TARFLLGSLNDFD 680



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------KAAQNAGV 67
           Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I        K+++  G+
Sbjct: 61  YANGSLHIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGL 120

Query: 68  TTKVFVDQNSRNF 80
            T V + Q + +F
Sbjct: 121 -TPVKLRQKAHDF 132


>gi|70728445|ref|YP_258194.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|90101545|sp|Q4KHT9|SYV_PSEF5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68342744|gb|AAY90350.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 948

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 21/146 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +  D  K  F P D+ V G DI+ F    W A ++   + L
Sbjct: 469 VLDTWFSSGLWTFSTLGWPEQTDFLKT-FHPTDVLVTGFDIIFF----WVARMIMLTMHL 523

Query: 287 PKK-----------VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            K            V+ HG +   +G+K+SKS GNV+DP+++I+ + ++     LV++  
Sbjct: 524 VKNEDGTPQVPFKTVYVHGLVRDGQGQKMSKSKGNVLDPLDIIDGIDLET----LVQKRT 579

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGN 360
            G      +  ++K+  A+ A+GI +
Sbjct: 580 TGLMQPKLQKAIEKQTRAEFADGIAS 605



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GH +   I D L RF R+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 47 HMGHGFNNAIMDALIRFRRMQGRNTLWQPGTD-----------HAGIATQMLVERQ 91


>gi|15646031|ref|NP_208213.1| isoleucyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024677|sp|P56456|SYI_HELPY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2314596|gb|AAD08464.1| isoleucyl-tRNA synthetase (ileS) [Helicobacter pylori 26695]
          Length = 920

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVILEGSDQHRGWFQSSLLIGCVLNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KKV +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|302331710|gb|ADL21904.1| Leucyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 953

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV ARF+R+ G +VL T G D  G    + A 
Sbjct: 56  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARFNRMLGKNVLHTLGYDAFGLPAEQYAI 115

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 116 QTGTHPRATTMSNIANMQRQLSALGLGHD 144


>gi|300859468|ref|YP_003784451.1| leucyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686922|gb|ADK29844.1| Leucyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 960

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV ARF+R+ G +VL T G D  G    + A 
Sbjct: 63  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARFNRMLGKNVLHTLGYDAFGLPAEQYAI 122

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 123 QTGTHPRATTMSNIANMQRQLSALGLGHD 151


>gi|284164483|ref|YP_003402762.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284014138|gb|ADB60089.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 934

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 19/197 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  AR+ R+ G DVL   G D  G     AA     
Sbjct: 35  YVLGMFPYTSGTLHMGHVRNYAITDAYARYRRMQGDDVLHPMGWDAFGLPAENAAFERKT 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI-YKGCY 124
             + +     R  RD  + +   YD    I T E  ++   +  +K++ ++G + Y+G  
Sbjct: 95  DPESWTQACIRRMRDELETMGFGYDWSREITTCEPEYYRWNQWFFKRLYEEGLVEYEGAS 154

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAYQDKL-- 176
             W         + + V   A  +  + +        PV   E + +FF ++ Y ++L  
Sbjct: 155 VNWCP-------DCETVLAAAQVEERDGERVCWRCETPVGRRELDQWFFTITDYAEELHD 207

Query: 177 -LSYYESHPEFILPIER 192
            L   E  P+ +  I+R
Sbjct: 208 GLEDLEGWPDGVREIQR 224



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 13/82 (15%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D++V G++    H +Y   F        LL    P+ +++ S G +L+ GEK+S S G
Sbjct: 567 PVDVYVGGEEHAILHLLYTRFFTKALADLGLLEQREPI-RELKSQGTVLYDGEKMSSSKG 625

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV+ P    +E G +  R F++
Sbjct: 626 NVVAP----QEYGAETTRLFVL 643


>gi|222151682|ref|YP_002560838.1| leucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782505|sp|B9E7H4|SYL_MACCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222120807|dbj|BAH18142.1| leucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 802

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 20/128 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPK----KVFSHGFILHKG-EKISK 305
           K+ P DL++ G +    H +Y   W   L    +   K    K+F+ G IL +G EK+SK
Sbjct: 518 KWLPVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEGNEKMSK 577

Query: 306 SLGNVIDPIEVIEEVGVDALRYF------LVREIACGKDGFYDKDGLKK---RVNADLAN 356
           S GNV++P +V+   G D LR +      L   IA   +G    DG ++   RV   L N
Sbjct: 578 SKGNVVNPDDVVASHGADTLRLYEMFMGPLDASIAWSTNGL---DGARRFLDRVYRLLVN 634

Query: 357 GIGNLVSR 364
             G L  +
Sbjct: 635 EDGTLSEK 642



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 15  YPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+ A  H+GH       D+++RF R+ G +VL   G D  G    + A + G     F 
Sbjct: 40  YPSGAGLHVGHPEGYTATDIISRFKRMQGYNVLHPMGWDAFGLPAEQYAIDTGNDPAEFT 99

Query: 74  DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY-KGCYSGWYSL 130
           ++N   F+     L  SYD    I TT+  ++   + ++ ++  KG  Y       W   
Sbjct: 100 EKNIATFKRQIQELGFSYDWEREINTTDPEYYKWTQWIFIQLYKKGLAYVDEVAVNWCPA 159

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES--HPEFIL 188
                 N++ +    DG      H PV       +  +++ Y D+LL   E    PE + 
Sbjct: 160 LGTVLSNEEVI----DGVSERGGH-PVIRKPMRQWVLKITEYADRLLEDLEELDWPESLK 214

Query: 189 PIER 192
            ++R
Sbjct: 215 DMQR 218


>gi|71908659|ref|YP_286246.1| isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|84029513|sp|Q47BK5|SYI_DECAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71848280|gb|AAZ47776.1| Isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 932

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 34/275 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           VW D+ T +           GS A    +PADL++ G D  R  F +       +    P
Sbjct: 541 VWFDSGTTHWHVM------RGSHAADHTYPADLYLEGSDQHRGWFQSSLLSGCAIDGRAP 594

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K + +HGF++  KG K+SKS GNVI P +V +++G D LR +       G+    D+ 
Sbjct: 595 Y-KGLLTHGFVVDGKGHKMSKSKGNVIAPQQVSDKMGADILRLWTASTDYSGELTISDE- 652

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQEI 401
            + KRV  +    I N + R +   + D+D    M+P    + E D   L++   +    
Sbjct: 653 -ILKRV-VEGYRRIRNTL-RFLLANVSDFDAATDMLPI-DQWLEIDRYALALTRELQDGC 708

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA------STVLYVTVE 453
           R +      HR +  + +  SE     Y D  K   L  T P         S + ++T  
Sbjct: 709 RADFDKYEFHRVVQALQTFCSEDLGGFYLDILKD-RLYTTAPKSVARRSAQSALWHITQA 767

Query: 454 VIRQLAILLQAFVPKLANKIFDILF-VADENRCFQ 487
            +R LA  + AF    A +++ +L   AD++  FQ
Sbjct: 768 FVRLLAP-ITAFT---AEEVWQVLTGKADDSVMFQ 798



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R +  +     Y N   HIGHA   ++ D++ R   L G D  +  G D HG  I
Sbjct: 48  RPRFTLHDGPPYANGDIHIGHAVNKVLKDIIVRSKTLSGFDAPYVPGWDCHGLPI 102


>gi|306829906|ref|ZP_07463093.1| isoleucine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427917|gb|EFM31010.1| isoleucine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPGYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|302421734|ref|XP_003008697.1| isoleucyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261351843|gb|EEY14271.1| isoleucyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 1082

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 15/213 (7%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
            W ++ +    +T Y  +N D  +   +PAD    G D  R  F+ +      L    P 
Sbjct: 524 CWFESGSMPYASTHYPFENADNFQGSLFPADFIAEGLDQTRGWFYTLTVLGNKLFGVSPF 583

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            +   ++G +L   G K+SKSL N  DP  VI E G DALR +L+       +    K+ 
Sbjct: 584 -RNCITNGLVLASTGVKMSKSLKNYPDPSNVINEYGSDALRLYLINSPVVRAEPLRFKEA 642

Query: 346 LKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGAFTES-------DESILSVCS 395
             K V + +   + N          +  K+          FTE        D  IL+ C 
Sbjct: 643 GVKEVVSKVLLPLWNSYRFFCEQALLYKKNNGEDFAADPTFTEGKGLENVMDRWILADCQ 702

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            +LQ I + M    ++  + +++S++  +  ++
Sbjct: 703 SMLQFIDQEMAAYRLYTVVPRLLSVLDNLTNWY 735


>gi|291614869|ref|YP_003525026.1| valyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584981|gb|ADE12639.1| valyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 948

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 16/112 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKS 306
           ++ P+ + V G DI+ F    W A +      ++  +P  + V+ HG I   +G+K+SKS
Sbjct: 491 QYLPSSVLVTGFDIIFF----WVARMVMMTKHITGKIPF-RDVYVHGLIRDAEGQKMSKS 545

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GNV+DPI++I+ + +D+    LV++   G     D + ++KR   +   GI
Sbjct: 546 KGNVLDPIDLIDGIDLDS----LVKKRTTGLMNPKDAEKIEKRTRKEFPEGI 593



 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GH +   + D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHGFNQTLMDALTRYHRMRGDNTLWQPGTD-----------HAGIATQIVVERQ 96


>gi|254459954|ref|ZP_05073370.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676543|gb|EDZ41030.1| isoleucyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 995

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++ VW D+ + +  +    D  DG++     AD+++ G D  R  FH+    A       
Sbjct: 601 VLDVWFDSGSTH--SFVLRDRSDGTEDGI--ADVYMEGTDQHRGWFHSSLLQACGTLGRA 656

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           P  + V +HGF L  KG K+SKSLGN I P  V+++ G D LR ++ +
Sbjct: 657 PY-RNVVTHGFTLDEKGMKMSKSLGNTIVPETVVKQYGADILRLWVAQ 703



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA    I D++ R H++ G D  +  G D HG        ++  K  +N  
Sbjct: 87  YANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKIEEQYRKKGKNKD 146

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               V   Q  R F +    +DI  ++F R
Sbjct: 147 EVNIVDFRQECRKFAE--GWVDIQREEFKR 174


>gi|157150179|ref|YP_001449984.1| isoleucyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189082338|sp|A8AW24|SYI_STRGC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157074973|gb|ABV09656.1| isoleucyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|94987493|ref|YP_595426.1| isoleucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082128|sp|Q1MPH2|SYI_LAWIP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|94731742|emb|CAJ55105.1| Isoleucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 937

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 17/174 (9%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSAN---LPLPKKVFSHGFILH-KGEKISKSLGNV 310
           PADL++ G D  R  FH+    + L+S     +P    V +HG+++   G K+SKS+GNV
Sbjct: 560 PADLYLEGSDQHRGWFHS----SLLISIGTRGVPPYHAVLTHGYVVDGDGRKMSKSMGNV 615

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSM 368
             P E+I + GV+ LR + V  +   +D     + L++ V+A   + N    L+     +
Sbjct: 616 TSPQEIISKFGVEILRLW-VSSVDYREDVRISNEILQRLVDAYRRIRNTCRYLLGNINDL 674

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            L   D ++P        D+ IL V +    EI+++  +   H    ++ +L +
Sbjct: 675 TL---DELVPV-KEMESLDQYILDVVATAYTEIQKSYISYDFHTVFHKLHNLCT 724


>gi|150018017|ref|YP_001310271.1| methionine--tRNA ligase [Clostridium beijerinckii NCIMB 8052]
 gi|149904482|gb|ABR35315.1| Methionine--tRNA ligase [Clostridium beijerinckii NCIMB 8052]
          Length = 655

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 48/303 (15%)

Query: 215 DWGIKIPDD---PQYIMYVWIDALTNYLT-TTGYLD----NPDGSKAKFWPAD----LHV 262
           +WG+K+PD         +VW ++L   ++ T  YL+    NP+  +  +W  D       
Sbjct: 326 EWGVKVPDKEYLKNLTFWVWPESLWAPISFTKAYLESRGKNPEEWR-NWWDNDDSIVYQF 384

Query: 263 IGKDILRFHAIYWPAFLLSANLP-----------LPKKVFSHGFILHKGEKISKSLGNVI 311
           IG+D + F++I   A  +   +P           LP  + S+  IL   +K S S  ++ 
Sbjct: 385 IGEDNIYFYSIAEMAMFIGLKMPKGENVDVTKLNLP-HIVSNKHILFMDKKASSS-SDIK 442

Query: 312 DPI--EVIEEVGVDALR-YFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVS--- 363
            P+  E+++    D LR +F+   ++    GF  +  +K  ++V AD     GNL++   
Sbjct: 443 PPMADELLKFYTKDQLRMHFMSLGLSSKSVGFKPQVYMKEEEKVGADPVLKEGNLLTNVF 502

Query: 364 ----RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
               RS    L+  +  IP      +  E I  +  + + E   +M NQ  HR    +  
Sbjct: 503 NRLIRSCFYTLQSLNEDIPK----EDVSEKIKELTEKSVLEYERHMYNQDFHRIAYVLDD 558

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + EV+++      W     N +    V+       + +A+L+    P+      D L +
Sbjct: 559 YIREVNKH------WASNIKNEELKRNVIADCFYACKVIAVLIHPIAPEGCEMFKDYLNI 612

Query: 480 ADE 482
            DE
Sbjct: 613 DDE 615



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARF--HRLDGLDVLFTTGTDEHGQKIAKA 61
          +K  ++  + Y N   H GH   M I AD+ ARF   R+   +V+F +GTD +G  I ++
Sbjct: 16 KKAIVTAGMPYGNKNLHFGHVGGMFIHADIFARFLRDRIGKENVIFVSGTDCYGSPILES 75


>gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1279

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L   +G     +PAD+++ G D  R  F +    +       P
Sbjct: 839 MDVWFDSGSSW---AGVLGKREGLS---FPADVYLEGTDQHRGWFQSSLLTSIATQGKAP 892

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  VIE
Sbjct: 893 Y-SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIE 925


>gi|327458758|gb|EGF05106.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--INRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTSDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|307707452|ref|ZP_07643934.1| isoleucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616404|gb|EFN95595.1| isoleucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     G+  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGIKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|262282734|ref|ZP_06060502.1| isoleucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262025|gb|EEY80723.1| isoleucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|224114922|ref|XP_002332263.1| predicted protein [Populus trichocarpa]
 gi|222832028|gb|EEE70505.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 29/194 (14%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P    V +HGF+L  KG K+SKSLGNV+DP
Sbjct: 132 PADLYLEGTDQHRGLFQSSLITSIAIKGKAPY-FSVITHGFVLDEKGCKMSKSLGNVVDP 190

Query: 314 IEVIEEV-------GVDALRYFL-----VREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
             + E +       G D LR ++       ++  G    +    + +++   L   +GNL
Sbjct: 191 HAITERLVMEAPGYGADVLRLWVSSVDYTGDVMIGPQVLWQMSDIYRKLRGTLRYLLGNL 250

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                   +   D  +P        D+  L     V++ IRE+   Q     + QVI   
Sbjct: 251 HDWEADNAISYND--LPM------IDKHTLFQLENVVKTIRESYDYQFF--KIFQVIQRF 300

Query: 422 SEVDR---YFDAQK 432
             VD    YFD  K
Sbjct: 301 GFVDPSNFYFDVAK 314


>gi|158186770|ref|NP_445744.1| valyl-tRNA synthetase [Rattus norvegicus]
 gi|73920806|sp|Q04462|SYVC_RAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
            ligase; Short=ValRS
 gi|46237603|emb|CAE83981.1| valyl-tRNA synthetase 2 [Rattus norvegicus]
 gi|149028031|gb|EDL83482.1| rCG38382, isoform CRA_c [Rattus norvegicus]
 gi|149028033|gb|EDL83484.1| rCG38382, isoform CRA_c [Rattus norvegicus]
          Length = 1264

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 109/281 (38%), Gaps = 76/281 (27%)

Query: 255  FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLG 308
            F+P  L   G DIL F    W A ++   L L +K+      LH       G K+SKSLG
Sbjct: 813  FYPGTLLETGHDILFF----WVARMVMLGLKLTEKLPFREVYLHAIVRDAHGRKMSKSLG 868

Query: 309  NVIDPIEVIE-------------------------------------EVGVDALRYFLVR 331
            NVIDP++VI                                      E G DALR+ L  
Sbjct: 869  NVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLCA 928

Query: 332  EIACGKDGFYDKDGLKKRVNADLANGIG-----NLVSRSVSMILKDYD-GMIPTPGAFTE 385
              + G+D           +N D+   +G     N +  +    L+    G +P+P +  E
Sbjct: 929  YTSQGRD-----------INLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSKPE 977

Query: 386  SDESILS--VCSRVLQEIRENMQNQLIHRALAQVIS-----LVSEVDRYFDAQKPW--EL 436
              ES++   + SR+ + +R + +    +   A   +     L    D Y +  KP    +
Sbjct: 978  GHESLVDRWIRSRLAEAVRLSNEGFQAYDFPAVTTAQYSFWLYELCDVYLECLKPVLNGV 1037

Query: 437  KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   D A   LY  ++V  +   LL  F+P +  ++F  L
Sbjct: 1038 DQVAADCARQTLYTCLDVGLR---LLSPFMPFVTEELFQRL 1075


>gi|229829031|ref|ZP_04455100.1| hypothetical protein GCWU000342_01116 [Shuttleworthia satelles DSM
           14600]
 gi|229792194|gb|EEP28308.1| hypothetical protein GCWU000342_01116 [Shuttleworthia satelles DSM
           14600]
          Length = 810

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D  K  +W P D +  G + +  H +Y   W  FL     +    P  K+ +    +   
Sbjct: 523 DRKKLDYWMPVDHYNGGMEHVTRHLLYSRFWHHFLYDIDQVGCPEPYAKRTYQGLILGPD 582

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+SKS GNVIDP++++ + G D LR +++
Sbjct: 583 GEKMSKSKGNVIDPLDIVRDYGADTLRTYVM 613



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 7/178 (3%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       +VLAR  R+ G +VLF  G D  G      
Sbjct: 29  DQPKWYGLVEFPYPSGAGMHVGHIKAYSSIEVLARKRRMQGYNVLFPIGFDSFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A        V  ++N  +F +    +  S+  D    T+   ++   + ++ ++   G +
Sbjct: 89  AIKTNTHPHVITEKNIEHFSEQLRRVGFSFDWDRCFATSRPDYYKWTQWIFLQLYKHGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           ++      Y    +   ++++    + G   +   + V  M ++ +F R++ Y DKLL
Sbjct: 149 FRSKTLVNYCPNCKVVLSNED----SQGGKCDICGSDVVQMSKDVWFLRITDYADKLL 202


>gi|225861487|ref|YP_002742996.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|254782446|sp|C1CSS4|SYI_STRZT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225727306|gb|ACO23157.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|327389845|gb|EGE88190.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|223040686|ref|ZP_03610955.1| isoleucyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878050|gb|EEF13162.1| isoleucyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 918

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--ANL 284
           I+ VW D+ + +       D   GS    +PAD+++ G D  R    +  + LLS  A  
Sbjct: 537 ILDVWFDSGSTWAAVLKSGDYDAGS----YPADMYLEGSDQHR--GWFQSSLLLSCAAQG 590

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P + V +HGF +   G+K+SKS GNV+ P  V +  GV+ LR ++ 
Sbjct: 591 RAPYRSVLTHGFTVDENGQKMSKSKGNVVAPANVAKTYGVEILRLWVA 638



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 25/49 (51%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA    + D++ + H   G ++ FT G D HG  I +  +
Sbjct: 60  YANGNIHIGHALNKTLKDIILKTHYFFGENIRFTPGWDCHGLPIEQQVE 108


>gi|169832458|ref|YP_001695040.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|254782442|sp|B1I721|SYI_STRPI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|168994960|gb|ACA35572.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|114325408|gb|AAH40376.2| IARS2 protein [Homo sapiens]
          Length = 957

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ + AQN  
Sbjct: 62  YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQN-- 119

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 120 -LSAMEIRKKARSFAKAA--IEKQKSAFIR 146



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 539 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 589

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 590 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWVADS 648

Query: 331 ---REIACG 336
               E+A G
Sbjct: 649 NVFTEVAIG 657


>gi|302207149|gb|ADL11491.1| Leucyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308277402|gb|ADO27301.1| Leucyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 953

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV ARF+R+ G +VL T G D  G    + A 
Sbjct: 56  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARFNRMLGKNVLHTLGYDAFGLPAEQYAI 115

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 116 QTGTHPRATTMSNIANMQRQLSALGLGHD 144


>gi|225549417|ref|ZP_03770389.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370045|gb|EEG99486.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|216264640|ref|ZP_03436632.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215981113|gb|EEC21920.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|149006726|ref|ZP_01830412.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147761641|gb|EDK68605.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|145591703|ref|YP_001153705.1| valyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283471|gb|ABP51053.1| valyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 799

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
            W+D+  +++  +GY    +     +  + +   G DI+R    Y    A+LL  N+P  
Sbjct: 459 TWMDSSISWMYASGYTKEFNVFPKVYPHSIMRPQGYDIIRTWLYYSLLRAYLLYGNVPF- 517

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           + V  +G  L  KGE + KS GNVID +  +E+ G DA+R++       G D  Y+++ +
Sbjct: 518 RYVRINGMGLDEKGEAMHKSKGNVIDLLAPVEKYGADAVRFWAAAAGRLGSDYRYNENII 577

Query: 347 KK 348
           K+
Sbjct: 578 KE 579


>gi|114572732|ref|XP_001172641.1| PREDICTED: mitochondrial isoleucine tRNA synthetase isoform 1 [Pan
           troglodytes]
          Length = 928

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG         ++ + AQN  
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQN-- 174

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             + + + + +R+F   A  ++     FIR
Sbjct: 175 -LSAMEIRKKARSFAKAA--IEKQKSAFIR 201



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 644

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 645 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPAVVVNGGQDQSKEPPYGADVLRWWVADS 703

Query: 331 ---REIACG 336
               E+A G
Sbjct: 704 NVFTEVAIG 712


>gi|90409058|ref|ZP_01217184.1| leucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90309839|gb|EAS37998.1| leucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 859

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 12/174 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYQRMQGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   YD    I T +  ++   +  + K+ +K  +YK
Sbjct: 92  KNNTAPAGWTYENIAYMKKQLKQLGFGYDWTREIATCKPEYYRWEQWFFTKLLEKDLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
              +  +   D+    +++V  G     G     +  P QW      F +++AY
Sbjct: 152 KMATVNWDPVDQTVLANEQVIDGRGWRSGALVEQKEIP-QW------FIKITAY 198


>gi|89070618|ref|ZP_01157898.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043765|gb|EAR49967.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 857

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 8/178 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ +  G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKATGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N          L    D      T +  ++   + L+    D G +Y
Sbjct: 90  MASGGHPKDWTYGNIDTMVGQMKPLGFGLDWSRMFATCDPEYYGQQQALFLDFLDAGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  +      N+  +    DG+ + +    V+  E   +FF++S   D+LL
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAE-VERRELTQWFFKISDMADELL 202



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 29/176 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP ++I   G D  R+F++ +    +D  +   G         A+     
Sbjct: 628 KMSKSKNNVVDPADIISRYGADTARWFVLSDSPPERDVEWTASG---------ADATHKH 678

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   +  +  D     P     +DE++L    + + E+ + +++   + A+A++ +  
Sbjct: 679 LARVYRIASEVSDAPEAGPNG---ADEALLKAMHKCIFEVTQGIESFGFNAAIAKLYAFT 735

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +             L+K++  R +       +  R LA L+    P L+ +I+ +L
Sbjct: 736 A------------TLQKSDAGREA-----KRQAARTLAQLMAPMTPHLSEEIWHML 774


>gi|307127869|ref|YP_003879900.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484931|gb|ADM91800.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332072827|gb|EGI83308.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|299117392|emb|CBN75348.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1072

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 28/144 (19%)

Query: 205 KDLSLSRKTFDWGIKIP-----------------DDPQYIMYVWIDALTNYLTTTGYLDN 247
           +D  +SR+ + WG +IP                    + ++  W  +     +  G+ D 
Sbjct: 544 RDWCISRQLW-WGHRIPAYFASVEGEKAVDQVCLSQDEDVLDTWFSSGLFPFSVFGWPDV 602

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GE 301
                  F+P  L   G DIL F    W A ++  +L L      K V+ H  +  K G 
Sbjct: 603 DSEDLKAFFPTTLLETGMDILFF----WVARMVMMSLELTDVLPFKTVYLHAMVRDKFGR 658

Query: 302 KISKSLGNVIDPIEVIEEVGVDAL 325
           K+SK+LGNVIDP+EVI    +D L
Sbjct: 659 KMSKTLGNVIDPLEVIYGCDLDTL 682


>gi|238020647|ref|ZP_04601073.1| hypothetical protein GCWU000324_00536 [Kingella oralis ATCC 51147]
 gi|237867627|gb|EEP68633.1| hypothetical protein GCWU000324_00536 [Kingella oralis ATCC 51147]
          Length = 942

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+       KA F P+++ V G +I+ F    W A ++      
Sbjct: 475 VLDTWFSSALVPFSTLGWPSETPELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 529

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 530 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDKL 574



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|254486586|ref|ZP_05099791.1| leucyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043455|gb|EEB84093.1| leucyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 848

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 12/185 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHSVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N  + RD    L +S D   +F  T +  ++   + L+     +G +
Sbjct: 90  MAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLKEGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W  +      N+  E  +G        +    QW      FF++S Y + LL
Sbjct: 149 YRKNAIVNWDPVDMTVLANEQVEAGRGWRSGALVERRELTQW------FFKISDYSEDLL 202

Query: 178 SYYES 182
           +  ++
Sbjct: 203 NALDT 207


>gi|221217622|ref|ZP_03589091.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192568|gb|EEE18786.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|154707562|ref|YP_001425008.1| isoleucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082321|sp|A9KEI8|SYI_COXBN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154356848|gb|ABS78310.1| isoleucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 936

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  +    P  K V ++GF++  +G K+SKSLGNVI P
Sbjct: 555 PADIYLEGSDQHRGWFQSSLLTSLAIRDKAPY-KSVLTYGFVVDSQGRKMSKSLGNVILP 613

Query: 314 IEVIEEVGVDALRYF 328
            +V++ +G D LR +
Sbjct: 614 ADVVKNLGADVLRLW 628



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+RE   K  +     Y N + H+G A+   + D++ +   L G D  F  G D HG  I
Sbjct: 43  KDREGQPKFILHDGPPYANGRAHLGTAFNKTLKDIVVKSKTLSGFDAPFVPGWDCHGLPI 102

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
               +      K+  +   +  RD A   +++  DDF R
Sbjct: 103 ELNVEKKLGKDKLSANAFRQACRDYAFSQIELQRDDFQR 141


>gi|15903545|ref|NP_359095.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515942|ref|YP_816928.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81449524|sp|Q8DNW4|SYI_STRR6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122278226|sp|Q04JB0|SYI_STRP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15459163|gb|AAL00306.1| Isoleucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076518|gb|ABJ54238.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|15901494|ref|NP_346098.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111658560|ref|ZP_01409223.1| hypothetical protein SpneT_02000316 [Streptococcus pneumoniae
           TIGR4]
 gi|148997709|ref|ZP_01825273.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575153|ref|ZP_02721116.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068285|ref|YP_003877251.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|263511608|sp|P0CB61|SYI_STRPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|14973150|gb|AAK75738.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756208|gb|EDK63250.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578897|gb|EDT99425.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306409822|gb|ADM85249.1| Isoleucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|314955200|gb|EFS99605.1| isoleucine--tRNA ligase [Propionibacterium acnes HL027PA1]
          Length = 1107

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 118/292 (40%), Gaps = 61/292 (20%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGTDALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G ++  +AD A G G+          
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQQ--DADPARGSGD---------S 730

Query: 371 KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + G++P   A T+    D  ++S  + +++++ E + N    R    +   V E+  +
Sbjct: 731 RGFGGVVPP--AVTQRHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNW 788

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 789 YVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 836


>gi|312148441|gb|ADQ31100.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|303255981|ref|ZP_07342009.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597040|gb|EFL64158.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 930

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|284931394|gb|ADC31332.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 805

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 16/191 (8%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+ +  H+GH    +  DV++R+    G +VL   G D  G    +
Sbjct: 27  KNKPKYYILDMFPYPSGKGLHVGHVKAYMATDVISRWKNALGFNVLHPIGWDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGD 118
            A         F  +N  NFR     L  +YD  +   TT K +    + ++KK+ +   
Sbjct: 87  YAIQTNNHPAKFTQENINNFRTQLKRLGFNYDYRLEVDTTNKNYFKWTQWIFKKLYEHDL 146

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSA 171
            Y+       C      L +E    D+   K ++ G Y   +    QW+       +++A
Sbjct: 147 AYQADIEVNWCEQLGTVLANEEVLTDENGNKISERGSYPVIKKKMRQWV------LKITA 200

Query: 172 YQDKLLSYYES 182
           + D+L+   E+
Sbjct: 201 FADQLIDGLEN 211



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 255 FWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKISK 305
           F P DL+V G++    H +Y   W  FL     +S+  P   K+ + G IL +   K+SK
Sbjct: 528 FMPVDLYVGGQEHAVLHLLYARFWYKFLHQIKIVSSTEPF-SKLINQGMILGEDNTKMSK 586

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLV 330
           S GN+I+P +++   G D +R +++
Sbjct: 587 SKGNIINPDDLVLSHGADTIRTYVM 611


>gi|84997307|ref|XP_953375.1| valyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304371|emb|CAI76750.1| valyl-tRNA synthetase, putative [Theileria annulata]
          Length = 941

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +    L+T G+ D        F+P  L   G DI+ F    W A ++  +L  
Sbjct: 426 VLDTWFSSGLFPLSTLGWPDTNTSDFKSFFPTSLLETGNDIIFF----WVARMVMLSLHF 481

Query: 286 ---LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
              LP  +++ H  +   +GEK+SKS GNV+DPI++IE   ++ L
Sbjct: 482 VDMLPFNEIYMHPLVRDSRGEKMSKSKGNVVDPIDIIEGTTLERL 526


>gi|268679959|ref|YP_003304390.1| valyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617990|gb|ACZ12355.1| valyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 876

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKS 306
           +F+P  L + G DIL F    W A ++ +       LP  K ++ H  +  + G+K+SKS
Sbjct: 486 EFYPNTLLITGFDILFF----WVARMMFSGEHTFKELPF-KDIYLHALVKDEHGQKMSKS 540

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            GNVIDP++ I E   D LR+ L      G+D
Sbjct: 541 KGNVIDPLDSIAEYSADTLRFTLAILAVQGRD 572



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGHA    + D++ RF R+DG   L+  GTD  G
Sbjct: 56 HIGHALTFTLQDIITRFKRMDGFKTLWQPGTDHAG 90


>gi|212213109|ref|YP_002304045.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|254782382|sp|B6J1S2|SYI_COXB2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|212011519|gb|ACJ18900.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 936

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  +    P  K V ++GF++  +G K+SKSLGNVI P
Sbjct: 555 PADIYLEGSDQHRGWFQSSLLTSLAIRDKAPY-KSVLTYGFVVDSQGRKMSKSLGNVILP 613

Query: 314 IEVIEEVGVDALRYF 328
            +V++ +G D LR +
Sbjct: 614 ADVVKNLGADVLRLW 628



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+RE   K  +     Y N + H+G A+   + D++ +   L G D  F  G D HG  I
Sbjct: 43  KDREGQPKFILHDGPPYANGRAHLGTAFNKTLKDIVVKSKTLSGFDAPFVPGWDCHGLPI 102

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
               +      K+  +   +  RD A   +++  DDF R
Sbjct: 103 ELNVEKKLGKDKLSANAFRQACRDYAFSQIELQRDDFQR 141


>gi|189195432|ref|XP_001934054.1| leucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979933|gb|EDU46559.1| leucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 941

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 15/188 (7%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           YP+   H+GH     I+DVLARF  + G  VL   G D  G     AA   GV  + +  
Sbjct: 4   YPSGTLHLGHLRVYTISDVLARFKHMQGYKVLHPIGWDAFGLPAENAAIERGVHPEKWTL 63

Query: 75  QN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
           QN        ++M    D  +D  IRT +   +   + ++  +   G  Y+      Y  
Sbjct: 64  QNIEAMKAQMKEMGGRWD--WDAEIRTCDPDFYKHTQRIFLMLHQHGLAYQAESLVNYDP 121

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES------HP 184
            D+    +++V   A+G  + +     + M ++ +F ++  +Q+ LL   ++       P
Sbjct: 122 IDQTVLANEQV--DANGCSWRSGSKVEKVMLKQ-WFLKIKEFQEPLLKDLDALARDGRWP 178

Query: 185 EFILPIER 192
           E +L ++R
Sbjct: 179 EKVLSMQR 186


>gi|165918823|ref|ZP_02218909.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917455|gb|EDR36059.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 936

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  +    P  K V ++GF++  +G K+SKSLGNVI P
Sbjct: 555 PADIYLEGSDQHRGWFQSSLLTSLAIRDKAPY-KSVLTYGFVVDSQGRKMSKSLGNVILP 613

Query: 314 IEVIEEVGVDALRYF 328
            +V++ +G D LR +
Sbjct: 614 ADVVKNLGADVLRLW 628



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+RE   K  +     Y N + H+G A+   + D++ +   L G D  F  G D HG  I
Sbjct: 43  KDREGQPKFILHDGPPYANGRAHLGTAFNKTLKDIVVKSKTLSGFDAPFVPGWDCHGLPI 102

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
               +      K+  +   +  RD A   +++  DDF R
Sbjct: 103 ELNVEKKLGKDKLSANAFRQACRDYAFSQIELQRDDFQR 141


>gi|15595178|ref|NP_212967.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|8928364|sp|O51773|SYI_BORBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2688775|gb|AAC67179.1| isoleucyl-tRNA synthetase (ileS) [Borrelia burgdorferi B31]
          Length = 1042

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|29653743|ref|NP_819435.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81629459|sp|Q83EC9|SYI_COXBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29541006|gb|AAO89949.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 936

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  +    P  K V ++GF++  +G K+SKSLGNVI P
Sbjct: 555 PADIYLEGSDQHRGWFQSSLLTSLAIRDKAPY-KSVLTYGFVVDSQGRKMSKSLGNVILP 613

Query: 314 IEVIEEVGVDALRYF 328
            +V++ +G D LR +
Sbjct: 614 ADVVKNLGADVLRLW 628



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+RE   K  +     Y N + H+G A+   + D++ +   L G D  F  G D HG  I
Sbjct: 43  KDREGQPKFILHDGPPYANGRAHLGTAFNKTLKDIVVKSKTLSGFDAPFVPGWDCHGLPI 102

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
               +      K+  +   +  RD A   +++  DDF R
Sbjct: 103 ELNVEKKLGKDKLSANAFRQACRDYAFSQIELQRDDFQR 141


>gi|322504457|emb|CAM45653.2| putative leucyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1075

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 18/93 (19%)

Query: 255 FWPADLHVIGKDILRFH--------AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           ++P DL   GKD+++ H        A  WPA         P+++F +G I    EK++KS
Sbjct: 680 WYPVDLRCSGKDLIQNHLTMFLYNHAAIWPA----DESKWPQRIFCNGHIQVDSEKMAKS 735

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            GN I   E I+  G DA R      +AC   G
Sbjct: 736 KGNFISLREAIDTYGADATR------LACADAG 762


>gi|153207885|ref|ZP_01946462.1| isoleucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212219167|ref|YP_002305954.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|254782381|sp|B6J9J5|SYI_COXB1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120576311|gb|EAX32935.1| isoleucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013429|gb|ACJ20809.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 936

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  +    P  K V ++GF++  +G K+SKSLGNVI P
Sbjct: 555 PADIYLEGSDQHRGWFQSSLLTSLAIRDKAPY-KSVLTYGFVVDSQGRKMSKSLGNVILP 613

Query: 314 IEVIEEVGVDALRYF 328
            +V++ +G D LR +
Sbjct: 614 ADVVKNLGADVLRLW 628



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+RE   K  +     Y N + H+G A+   + D++ +   L G D  F  G D HG  I
Sbjct: 43  KDREGQPKFILHDGPPYANGRAHLGTAFNKTLKDIVVKSKTLSGFDAPFVPGWDCHGLPI 102

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
               +      K+  +   +  RD A   +++  DDF R
Sbjct: 103 ELNVEKKLGKDKLSANAFRQACRDYAFSQIELQRDDFQR 141


>gi|61680214|pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The
          Archaeon Pyrococcus Horikoshii Reveals A Novel Editing
          Domain Orientation
          Length = 810

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAE 92



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D    GKD++  H      F +  ++ +      PK +  +GF   +G+K+SKS G
Sbjct: 601 WYPLDWRCSGKDLIPNHL----TFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKG 656

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 657 NVLNFIDAIEENGADVVRLYIM 678


>gi|313674935|ref|YP_004052931.1| valyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941633|gb|ADR20823.1| valyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 875

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 24/240 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILH-KGEKISKSL 307
           ++P +  V G DIL F    W A ++ A       LP  K V+  G +   KG K+SK L
Sbjct: 484 YYPTNDLVTGPDILFF----WVARMIIAGYEFKGELPF-KNVYLTGIVRDDKGRKMSKQL 538

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  D + +I++ G D +R  L+   A G D  +++   ++  N    N I N       
Sbjct: 539 GNSPDALGLIDKHGADGVRVGLLLSAAAGNDLLFEEKLCEQGWN--FGNKIWNAYRLVEG 596

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           + +K+ D    TP    ++ +   +     L+EI ++     I  AL     L+ +    
Sbjct: 597 LEVKEKD----TPIEAMKARDWFEARFQDALREINDHFSKFRISDALMATYKLIWDDFCS 652

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  KP   +  + +        T+     +  +L  F+P L  +I+  +   D+  C
Sbjct: 653 YYLELVKPPYGEAIDKE----TYEATITFFEDILTILHPFIPFLTEEIWHQITERDDKDC 708


>gi|225550259|ref|ZP_03771218.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369127|gb|EEG98581.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 1042

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|154333954|ref|XP_001563232.1| leucyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1075

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 18/93 (19%)

Query: 255 FWPADLHVIGKDILRFH--------AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           ++P DL   GKD+++ H        A  WPA         P+++F +G I    EK++KS
Sbjct: 680 WYPVDLRCSGKDLIQNHLTMFLYNHAAIWPA----DESKWPQRIFCNGHIQVDSEKMAKS 735

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            GN I   E I+  G DA R      +AC   G
Sbjct: 736 KGNFISLREAIDTYGADATR------LACADAG 762


>gi|17864482|ref|NP_524838.1| Valyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|24653289|ref|NP_725259.1| Valyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|7303353|gb|AAF58412.1| Valyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|21627263|gb|AAM68598.1| Valyl-tRNA synthetase, isoform B [Drosophila melanogaster]
          Length = 1049

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 596 PDQTKDLQTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 650

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 651 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAG 697


>gi|261823081|ref|YP_003261187.1| isoleucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261607094|gb|ACX89580.1| isoleucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 937

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 25/213 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K+PD     + VW D+ + + +         G  A     D+++ G D  R  F +   
Sbjct: 525 VKVPD----TLDVWFDSGSTHASVVEARPEFGGHAA-----DMYLEGSDQHRGWFMSSLM 575

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +  +    P  ++V +HGF +  +G K+SKS+GN I P +V  ++G D LR ++     
Sbjct: 576 ISTAIKGKAPY-RQVLTHGFTVDGQGRKMSKSIGNTISPQDVTNKLGADILRLWIGSTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV- 393
            G+    D+  + KR +AD    I N    +   +L + +G  P   +    +  +L   
Sbjct: 635 SGEIAVSDE--ILKR-SADAYRRIRN----TARFLLANLNGFDPQKDSVKPEEMVVLDRW 687

Query: 394 ---CSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C++  Q EI E  ++   HR + +++   S
Sbjct: 688 AVGCAKAAQDEILEAYESYDFHRVVQRLMQFCS 720


>gi|195485094|ref|XP_002090947.1| Aats-val [Drosophila yakuba]
 gi|194177048|gb|EDW90659.1| Aats-val [Drosophila yakuba]
          Length = 1049

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 596 PDQTKDLKTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 650

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 651 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAG 697


>gi|194398241|ref|YP_002038273.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|254782440|sp|B5E709|SYI_STRP4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4009476|gb|AAC95446.1| isoleucine-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357908|gb|ACF56356.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|322793998|gb|EFZ17236.1| hypothetical protein SINV_02804 [Solenopsis invicta]
          Length = 804

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH     I+D +ARF+RL G +V+   G D  G     AA    +   V+ ++N    R
Sbjct: 1   MGHVRVYTISDTVARFYRLKGKNVIHPMGWDAFGLPAENAAIERQINPAVWTNENIETMR 60

Query: 82  DMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIY-KGCYSGW 127
           +    L+ S+D   +F  T +  ++   + L+ K+ DKG  Y K  Y  W
Sbjct: 61  NQLKRLNYSFDWDREFA-TCDPDYYKWTQELFLKLFDKGLAYQKEAYVNW 109


>gi|320094120|ref|ZP_08025933.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978922|gb|EFW10452.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 909

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           IM  W  +  +     G+L + D   A+ +P DL   G+DI+R    +  + ++ A+L  
Sbjct: 544 IMDTWATSSLSPQLACGWLHD-DDLFARTYPMDLRPQGQDIIR---TWLFSTVVRADLEF 599

Query: 287 PKKVFSH----GFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               + H    G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D 
Sbjct: 600 GALPWRHAGLSGWILDADHK--KMSKSKGNVVTPMGLLEKYGSDAVRYWAA-SARLGLDA 656

Query: 340 FYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +D+  +K  +R+   + N     ++        D D  + T     + D S+L+  + V
Sbjct: 657 AFDEQQMKIGRRLAIKVLNASKFALTMGGEGAQLDLDPALVT----VDLDRSVLAELAGV 712

Query: 398 LQEIRENMQNQLIHRAL 414
           + E  + +      RAL
Sbjct: 713 VAEATDALAAYDHARAL 729



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   HIGH +     DV+ARF R+ G  V +  G D++G    +  
Sbjct: 48  REQVYSIDTPPPTVSGSLHIGHVFSYTHTDVVARFQRMRGRAVFYPMGWDDNGLPTERRV 107

Query: 63  QN 64
           QN
Sbjct: 108 QN 109


>gi|295698742|ref|YP_003603397.1| isoleucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157336|gb|ADD79781.1| isoleucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 944

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 8/76 (10%)

Query: 259 DLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           D+++ G D  ++   +  + +LS     N+P  K + +HGF++ + G K+SKS+GN+I P
Sbjct: 556 DIYLEGFD--QYRGWFMSSLILSVAVKNNIPC-KTIIAHGFVVDEHGRKMSKSVGNIITP 612

Query: 314 IEVIEEVGVDALRYFL 329
            E+I+E G D LR ++
Sbjct: 613 KEIIDEFGADVLRLWV 628



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA   I+ D+L +  R+ G D  F  G D HG  I    Q   +  K+F  
Sbjct: 59  YANGNVHIGHAVNKILKDILIKSKRMKGFDSPFILGWDCHGLPIEN--QIEKIKGKLFNK 116

Query: 75  QNSRNFR 81
            +   FR
Sbjct: 117 NHFFEFR 123


>gi|300024113|ref|YP_003756724.1| isoleucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525934|gb|ADJ24403.1| isoleucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 1050

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           V +HGF+L  KG+K+SKSLGNV+ P +VI + G D LR ++ 
Sbjct: 705 VLTHGFVLDEKGQKMSKSLGNVVAPQDVIAKSGADILRLWVA 746



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K R K  +     Y N   HIGHA   I+ D++ +  ++ G D  +  G D HG     K
Sbjct: 73  KGRVKFTLHDGPPYANGNIHIGHALNKILKDLVVKSQQMLGHDSNYVPGWDCHGLPIEWK 132

Query: 58  IAKAAQNAGVTTKVFVDQNSRN-FRD-----MADVLDISYDDFIR 96
           I +  +  G     F+D  + N FRD      A  LD+  ++F R
Sbjct: 133 IEEQYRAKGKEKPNFLDPVAINAFRDECRKFAAHWLDVQREEFKR 177


>gi|148988705|ref|ZP_01820138.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925906|gb|EDK76981.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|148556685|ref|YP_001264267.1| isoleucyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148501875|gb|ABQ70129.1| Isoleucyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 953

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 1/42 (2%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           V +HGF L  +G K+SKS+GNV+DP+++I E G D LR ++ 
Sbjct: 622 VLTHGFALDGQGRKMSKSVGNVVDPLKIINESGADILRLWVA 663


>gi|161830331|ref|YP_001596339.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082322|sp|A9NBM5|SYI_COXBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161762198|gb|ABX77840.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 936

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PAD+++ G D  R  F +    +  +    P  K V ++GF++  +G K+SKSLGNVI P
Sbjct: 555 PADIYLEGSDQHRGWFQSSLLTSLAIRDKAPY-KSVLTYGFVVDSQGRKMSKSLGNVILP 613

Query: 314 IEVIEEVGVDALRYF 328
            +V++ +G D LR +
Sbjct: 614 ADVVKNLGADVLRLW 628



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+RE   K  +     Y N + H+G A+   + D++ +   L G D  F  G D HG  I
Sbjct: 43  KDREGQPKFILHDGPPYANGRAHLGTAFNKTLKDIVVKSKTLSGFDAPFVPGWDCHGLPI 102

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
               +      K+  +   +  RD A   +++  DDF R
Sbjct: 103 ELNVEKKLGKDKLSANAFRQACRDYAFSQIELQRDDFQR 141


>gi|15292509|gb|AAK93523.1| SD04748p [Drosophila melanogaster]
          Length = 1049

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 596 PDQTKDLQTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 650

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 651 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAG 697


>gi|17547177|ref|NP_520579.1| isoleucyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|17429479|emb|CAD16165.1| probable isoleucyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 960

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 20/230 (8%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+    A +L    P  K + +HGF +  +G K+SKS+GN I P 
Sbjct: 588 ADLYLEGSDQHRGWFHSSLLTASMLYGKPPY-KALLTHGFTVDGEGRKMSKSIGNTIAPQ 646

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+  ++G + +R ++      G+    D+  + KRV  +    I N + R +   L DYD
Sbjct: 647 EIANKMGAEIIRLWVASTDYSGELAISDE--ILKRV-VEGYRRIRNTL-RFLLANLTDYD 702

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                +P P  + E D   +++   + +EI  +      H  ++++ +  SE     Y D
Sbjct: 703 HARHALP-PEQWLEIDRYAVALTDALQKEILSHYDVYEFHPVVSKLQTFCSEDLGGFYLD 761

Query: 430 AQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K   L  T PD      A   LY   + +        +F  + A ++F
Sbjct: 762 VLKD-RLYTTAPDSVARRSAQNALYHITQAMLHWMAPFLSFTAEEAWQVF 810



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  +K  +     Y N   HIGHA   I+ D++ +   L GLD ++  G D HG  I   
Sbjct: 55  KGAKKFILHDGPPYANGDLHIGHAVNKILKDMVIKSRGLTGLDAVYVPGWDCHGMPIEIQ 114

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
                 K      V  K       +  R   D     VL    D ++    +   D  R 
Sbjct: 115 IEKQFGKGLPVQEVQEKARAYATGQIARQKVDFERLGVLGDWADPYLTMNFRNEADEVRA 174

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 175 L-GKILEKGYVFRG 187


>gi|332159288|ref|YP_004424567.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034751|gb|AEC52563.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 967

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+ 
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAER 93



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D    GKD++  H      F +  ++ +      P+ +  +GF   +G+K+SKS G
Sbjct: 601 WYPLDWRCSGKDLIPNHL----TFFIFNHVAIFREEHWPRGIAVNGFGTLEGQKMSKSKG 656

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 657 NVLNFIDAIEENGADVVRLYIM 678


>gi|315634925|ref|ZP_07890207.1| isoleucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476477|gb|EFU67227.1| isoleucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 940

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA---NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 575 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-- 392
            G+    D+  + KR  AD    I N    +   +L + +G  P   A    D   L   
Sbjct: 635 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPQRDAVKPEDMMSLDRW 687

Query: 393 --VCSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C+   Q EI++   N   H  + +++   S
Sbjct: 688 AVACALEAQNEIKDAYDNYQFHAVVQRLMRFCS 720


>gi|312149303|gb|ADQ29374.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 1042

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|315504593|ref|YP_004083480.1| leucyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315411212|gb|ADU09329.1| leucyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 946

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+     YP+ A  H+GH    I  D  AR+ R+ G +VL   G D  G    + A 
Sbjct: 58  EKLYVLDMFPYPSGAGLHVGHPLGYIGTDCYARYQRMAGRNVLHAMGFDAFGLPAEQYAV 117

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N   +R+    L + +D+
Sbjct: 118 QTGTHPRTTTEANIERYREQLRRLGLGHDE 147


>gi|223889327|ref|ZP_03623914.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885248|gb|EEF56351.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 1042

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|168493559|ref|ZP_02717702.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576284|gb|EDT96812.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|326386297|ref|ZP_08207921.1| isoleucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209522|gb|EGD60315.1| isoleucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 945

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 11/110 (10%)

Query: 227 IMYVWIDALTNY---LTTTGYLD--NPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFL 279
           I+ VW D+ + +   L +  + D   P+G +     ADL++ G D  R  F +    +  
Sbjct: 560 ILDVWFDSGSTHAFVLESGRWPDLVRPEGYRGPL--ADLYLEGSDQHRGWFQSSLLESCA 617

Query: 280 LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
              + P  K + +HGF +  KG K+SKSLGN I P++++ + G D LR +
Sbjct: 618 TRGHAPY-KAILTHGFTMDAKGMKMSKSLGNTISPLDLMRDYGADILRLW 666



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           REK  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 51  REKFILHDGPPYANGDMHIGHALNHILKDMVVRTQTLLGKDAPYVPGWDCHGLPI 105


>gi|307707036|ref|ZP_07643833.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617562|gb|EFN96732.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|291529839|emb|CBK95424.1| isoleucyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 1049

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 23/236 (9%)

Query: 248 PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           P  +K KF   +PAD      D  R  F+++   + LL    P  K V   G +L K G+
Sbjct: 542 PFENKEKFEQQFPADFISEAVDQTRGWFYSLLAISTLLFNKAPY-KNVIVLGLVLDKDGQ 600

Query: 302 KISKSLGNVIDPIEVIEEVGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           K+SKS GN +DP E + E G DA+R YF         + F+      K VN      I  
Sbjct: 601 KMSKSKGNAVDPFESLAEHGADAIRWYFYTNSAPWLPNRFH-----AKAVNEGQRKYIST 655

Query: 361 LVSRSVSMIL----KDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           L +     +L     ++D    T      +  D+ +LS  + V+ E+ +N+ N  I  A 
Sbjct: 656 LWNTYAFYVLYANIDNFDATKYTLDVDKLSVMDKWLLSRLNTVVGEVDDNLANYRIPEAA 715

Query: 415 AQVISLVSEVDRYF---DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFV 466
             +   V E+  ++     ++ W  + T     A   LY  +  I + +  +  FV
Sbjct: 716 RALQDFVDEMSNWYVRRSRERFWSKELTQDKINAYMTLYTALVTIAKTSAPMTPFV 771



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N +PHIGH    +I D++ R+  + G +V    G D HG
Sbjct: 53 NGKPHIGHVLTRVIKDMIPRYRTMKGYNVPRKAGWDTHG 91


>gi|237727527|ref|ZP_04558008.1| valyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229434383|gb|EEO44460.1| valyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 875

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A      ++P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMAGYEYKGDMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           GN  DP+E+I++ G D +R  ++     G D  +D
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD 574


>gi|254466755|ref|ZP_05080166.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687663|gb|EDZ48145.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 854

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 8/182 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY- 120
            +G   K +   N     +    L +S D      T +  ++   + L+    +KG +Y 
Sbjct: 91  ASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYR 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +     W  + D     +++V  G  G    A    V+  E   +FF++S + ++LLS  
Sbjct: 151 RNAVVNWDPI-DMTVLANEQVENGR-GWRSGAL---VERRELTQWFFKISDFSEELLSAL 205

Query: 181 ES 182
           ++
Sbjct: 206 DT 207



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 29/174 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 625 KMSKSKNNVVDPLHIISSFGADTARWFVLSDSPPERDVEWTASGAE--AAHKHLNRVWNL 682

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R     + + D   P  G     DE +L    + ++++   + +   + A+A++ +  
Sbjct: 683 CDR-----IGEMDREAPGVG-----DEELLREMHKCIRDVTLGIDSFGFNAAIAKLYAFT 732

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + +     K                 V  + I  LA L+    P LA  I++
Sbjct: 733 GTLSKSKAGYK-----------------VQRQAIMTLAQLMSPMTPHLAEDIWN 769


>gi|168491459|ref|ZP_02715602.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225855089|ref|YP_002736601.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|237650665|ref|ZP_04524917.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822424|ref|ZP_04598269.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|254782444|sp|C1CFN0|SYI_STRZJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|183574218|gb|EDT94746.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225723500|gb|ACO19353.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|148984094|ref|ZP_01817389.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923383|gb|EDK74496.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800472|emb|CBW33110.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|332073994|gb|EGI84472.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|71900312|ref|ZP_00682448.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
 gi|71729960|gb|EAO32055.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
          Length = 753

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  Y 
Sbjct: 95  KNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 155 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 206



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 587 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 633

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 634 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 663


>gi|325688227|gb|EGD30246.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++ +    ++ P+ +    +PAD+++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNSVV--VNRPELT----YPADIYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|254460912|ref|ZP_05074328.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677501|gb|EDZ41988.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 853

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 12/182 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 29  ESKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKMSTGHNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G   K +   N  + R+    L +S D   +F  T +  ++   + L+    D+G 
Sbjct: 89  AMAIGGHPKDWTYSNIADMREQMKPLGLSIDWSREFA-TCDVDYYGQQQALFLDFLDEGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           +Y K     W  +      N+  E  +G        +    QW      FF++S + ++L
Sbjct: 148 VYRKNAVVNWDPVDMTVLANEQVEAGRGWRSGALVERRELTQW------FFKISDHSEEL 201

Query: 177 LS 178
           L+
Sbjct: 202 LA 203


>gi|189184301|ref|YP_001938086.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189181072|dbj|BAG40852.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 854

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 220 IPDDPQYIMYVW-IDALTNYLTTTGYLDN--PDGSK-AKFWPADLHVIGKDILRFHAIYW 275
           IPD    +M  W   +L+  L++ G   N   D ++  + +PADL     +I+R    Y 
Sbjct: 465 IPDSD--VMDTWATSSLSPQLSSHGISSNLTIDSTRHNQLFPADLRSQAHEIIRTWTFYT 522

Query: 276 --PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
              ++L   +LP  K + S   +    +K+SKS GN+I P E+I+  G DA+RY+
Sbjct: 523 IVKSYLHQNSLPWSKIMISGWCLADDRKKMSKSKGNIILPTELIQRYGADAVRYW 577


>gi|168486973|ref|ZP_02711481.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570098|gb|EDT90626.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|154173836|ref|YP_001407768.1| isoleucyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166200201|sp|A7GX26|SYI_CAMC5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112802487|gb|EAT99831.1| isoleucyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 919

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +        N     A  +PAD+++ G D  R  F +    +  ++++ 
Sbjct: 538 ILDVWFDSGSTWHAVL----NSKNYDAGSYPADMYLEGSDQHRGWFQSSLLVSTAINSHA 593

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K + +HGF +   G+K+SKS GNV+ P +V +  GV+ LR ++
Sbjct: 594 PY-KNILTHGFTVDENGQKMSKSKGNVVAPQDVAKSYGVEILRLWV 638



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 25/49 (51%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ D++ + H   G +V +  G D HG  I +  +
Sbjct: 60  YANGHLHIGHALNKILKDIITKTHYFFGENVRYVPGWDCHGLPIEQQVE 108


>gi|301794641|emb|CBW37092.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|297380582|gb|ADI35469.1| isoleucyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 920

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +      L++  G K +  P+D+ + G D  R  F +      +L+  
Sbjct: 536 HILDVWFDSGSTF---KAVLEDYHGEKGQS-PSDVVLEGSDQHRGWFQSSLLIGCILNNQ 591

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  KK+ +HGFI+  KGEK+SKS GNV+   ++++  G D +R ++ 
Sbjct: 592 APF-KKIITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVRLWVA 638


>gi|258655488|ref|YP_003204644.1| leucyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258558713|gb|ACV81655.1| leucyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 978

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++KLY+     YP+ A  H+GH    I  DV+ RF R+ G +VL T G D  G    + A
Sbjct: 68  KDKLYLLDMFPYPSGAGLHVGHPLGYIGTDVIGRFMRMTGRNVLHTIGYDAFGLPAEQYA 127

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +   + N   +R     L  ++D
Sbjct: 128 VRTGTHPRTTTEANITRYRAQLRRLGFAHD 157


>gi|195941957|ref|ZP_03087339.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 1042

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L  N    K V  +G +L   G K+SKS  N  D
Sbjct: 546 FPADFIAEGLDQTRGWFYTLTILGTALFENTAF-KNVIVNGLVLSSDGRKMSKSFKNYTD 604

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI   G DALR +L+       D     D   + V  ++   I N  S   +  +  
Sbjct: 605 PMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAI-- 662

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDRYF 428
            D   P        + ++       L+ +++ +  ++    + +++  ++  + +++ ++
Sbjct: 663 IDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWY 722

Query: 429 DAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
             +      K+  D+     Y T+   I+ L ILL  F+P +  +I+  L
Sbjct: 723 IRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNL 772


>gi|317403334|gb|EFV83847.1| ValS protein [Achromobacter xylosoxidans C54]
          Length = 964

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     TT G+ D      A++ P+ + V G DI+ F    W A +      L
Sbjct: 496 VLDTWFSSGLVPFTTLGWPDK-TADLARYLPSSVLVTGFDIIFF----WVARMVMLTTHL 550

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG I    G+K+SKS GN +DP+++I+ + +D L
Sbjct: 551 TGQIPF-KHVYVHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLDGL 595



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+HR+ G D +F  GTD           +AG+ T++ V++ 
Sbjct: 71  HMGHAFNQTIMDGLIRYHRMLGDDTVFIPGTD-----------HAGIATQIVVERQ 115


>gi|313681914|ref|YP_004059652.1| isoleucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154774|gb|ADR33452.1| Isoleucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 918

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---N 283
           I+ VW D+ + +       +   G     +PADL++ G D  R    +  +  LS    +
Sbjct: 537 ILDVWFDSGSTWNAVLKSRNYDAGQ----YPADLYIEGSDQHR--GWFQSSLFLSTAVEH 590

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +   K + +HGF +  KGEK+SKS GNV+ P  V++E G + LR ++ 
Sbjct: 591 IAPYKALLTHGFTVDEKGEKMSKSKGNVVAPESVLKEYGSEILRLWVA 638



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAK---AAQNAGV 67
           Y N   HIGHA   ++ D++ ++H  +G  V FT G D HG    Q++ K     Q   +
Sbjct: 58  YANGHTHIGHALNKVLKDIIVKYHYFNGKSVRFTPGWDCHGLPIEQQVEKKLGGKQKKEL 117

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDF 94
            T   V Q  R+     + +DI  ++F
Sbjct: 118 LTTAEVRQMCRDH--AKEFIDIQREEF 142


>gi|312867136|ref|ZP_07727346.1| isoleucine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097265|gb|EFQ55499.1| isoleucine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++    G + N    K   +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSW---NGVVVNRPELK---YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  +  ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWDH-PYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|307705381|ref|ZP_07642240.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621044|gb|EFO00122.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|294856131|gb|ADF45003.1| methionyl-tRNA synthetase [Escherichia sp. B827]
 gi|294856133|gb|ADF45004.1| methionyl-tRNA synthetase [Escherichia sp. E1492]
 gi|294856137|gb|ADF45006.1| methionyl-tRNA synthetase [Escherichia sp. H442]
 gi|294856141|gb|ADF45008.1| methionyl-tRNA synthetase [Escherichia sp. TW10509]
 gi|294856143|gb|ADF45009.1| methionyl-tRNA synthetase [Escherichia sp. TW11930]
 gi|294856219|gb|ADF45047.1| methionyl-tRNA synthetase [Escherichia coli]
 gi|294856221|gb|ADF45048.1| methionyl-tRNA synthetase [Escherichia coli]
          Length = 175

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
           ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +      +IS
Sbjct: 1   ADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNIS 60

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           YD++  T  + +     +++ ++ + G I
Sbjct: 61  YDNYHSTHSEENRQLSELIYSRLKENGFI 89


>gi|284931162|gb|ADC31100.1| methionyl-tRNA synthetase (MetRS) domain protein [Mycoplasma
           gallisepticum str. F]
          Length = 224

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 73/146 (50%), Gaps = 1/146 (0%)

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +++ +N+DL N +GN+V + + M+    +  I    A  E ++  L+   ++  E  + +
Sbjct: 11  IQETINSDLINNLGNIVHKLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAEFEKLV 70

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQA 464
           +   I  A+  V+++  E     + +KPWEL K N  +  + VL+     IR + +LL+ 
Sbjct: 71  EENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANVLFAGTCAIRTVFVLLEP 130

Query: 465 FVPKLANKIFDILFVADENRCFQSLD 490
            +   + ++++ +    E    ++++
Sbjct: 131 ILTTKSKEVYEQMNFTPEQTQLKNIN 156


>gi|269216160|ref|ZP_06160014.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130419|gb|EEZ61497.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 859

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          R K Y+     YP+   H+GH     I DV+AR+ R+ G DVL   G D  G     AA
Sbjct: 31 RPKKYVLEMFPYPSGDIHMGHVRNYTIGDVIARYSRMQGFDVLHPMGWDAFGLPAENAA 89



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 32/201 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D + A  W P D ++ G +    H +Y   F        +L  + P    +   G +L +
Sbjct: 543 DPATANAWMPVDQYIGGIEHAILHLLYSRFFTKVLRDMGMLDFDEPF-SNLLCQGMVLDE 601

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+ +SKS GNVI P ++I   G DA+R +++      K+  +++DGL          G+
Sbjct: 602 HGDVMSKSKGNVIAPEDMIASYGADAVRAYILFMAPPDKELLWNEDGLA---------GL 652

Query: 359 GNLVSRSVSMI--LKDYDG------MIPTPGAFTESDES---ILSVCSRVLQEIRENMQN 407
              ++R+  ++  LK   G        P  GA   SD +   +L    RV  ++ ++   
Sbjct: 653 SKFLNRAWRIVFDLKREGGDDSLFQADPGKGA-PRSDAARAKLLRERHRVAAKVADDFGR 711

Query: 408 QLIHRALAQVISLVSEVDRYF 428
              + A+A ++ LV+    Y 
Sbjct: 712 NAFNTAIAAIMELVNAASDYL 732


>gi|255716872|ref|XP_002554717.1| KLTH0F11946p [Lachancea thermotolerans]
 gi|238936100|emb|CAR24280.1| KLTH0F11946p [Lachancea thermotolerans]
          Length = 1100

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 11/122 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF--HAIYWPAFLLSANL 284
           ++  W  +     +T G+ +  +   ++F+P  +   G DIL F    +      L+  +
Sbjct: 623 VLDTWFSSGLWPFSTIGWPEKTE-DMSRFYPFSMLETGWDILFFWVSRMILLGLKLTGEI 681

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGK 337
           P  K+VF H  +   +G K+SKSLGNVIDP++V+  + ++ L   L+      RE+   K
Sbjct: 682 PF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVVSGISLEDLHAKLLGGNLDPREVEKAK 740

Query: 338 DG 339
            G
Sbjct: 741 SG 742


>gi|123965505|ref|YP_001010586.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229755|sp|A2BUL8|SYI_PROM5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123199871|gb|ABM71479.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 965

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 23/116 (19%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++          +  +   +PADL++ G D    H  ++ + LL++    N
Sbjct: 553 MDVWFDSGSSWAAVC------EQREELAYPADLYLEGSDQ---HRGWFQSSLLTSVAVNN 603

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
            P  KKV +HGF L   G K+SKSLGNV+DP  +I            G D LR ++
Sbjct: 604 KPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGSNQKIQPAYGADVLRLWV 659



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 26/54 (48%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           EK  +     Y N   H+GHA   ++ D++ ++  L G  V F  G D HG  I
Sbjct: 59  EKFTLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHFVPGWDCHGLPI 112


>gi|115374524|ref|ZP_01461805.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115368503|gb|EAU67457.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 952

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKG-EKISKSLGNVI 311
           K +PAD+     +I+R  A Y  A  +     +P + V   G++L    +K+SKS GNV+
Sbjct: 608 KLFPADIRPQSHEIIRTWAFYTVAKAMLHEDTIPWRDVLISGWVLDPDRKKMSKSRGNVV 667

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSM 368
            P  +IE  G DA+RY+       G D  +D+   K  KR+   L N    +VS++  +
Sbjct: 668 TPTHLIEAYGADAVRYWSA-SARLGVDTAFDEKVFKVGKRLVTKLFNASKYVVSQTAQV 725



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           H+GH +     D+ ARF R+ G ++ +  G D++G    +  QN
Sbjct: 119 HVGHIFSYTHTDITARFQRMLGKNIFYPMGWDDNGLPTERRVQN 162


>gi|113955156|ref|YP_730582.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132569|sp|Q0IAE0|SYL_SYNS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113882507|gb|ABI47465.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 867

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 1/104 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 47  QRAFYALSMFPYPSGTLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
              +   V+ D N    R     L +S  D+ R     H D  R
Sbjct: 107 ERKIEPGVWTDSNIAQMRGQLGRLGLSI-DWDREVATCHSDYYR 149



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 26/186 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        +  
Sbjct: 630 EKMSKSKHNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLWR 687

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           LV   V     ++DG+ P  G   ESD  I     + ++ + E++ +    + A+++++ 
Sbjct: 688 LVDSEV-----NHDGVSPATG---ESDSDIRRAVHQAIKAVSEDLSDDFQFNTAISELMK 739

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + +        P                V  E +  L  LL  F P LA + +  L  
Sbjct: 740 LSNSLSSGLAQASP---------------GVRQEAMSALVRLLAPFAPHLAEEFWQRLGG 784

Query: 480 ADENRC 485
            D   C
Sbjct: 785 EDSVHC 790


>gi|167648017|ref|YP_001685680.1| isoleucyl-tRNA synthetase [Caulobacter sp. K31]
 gi|167350447|gb|ABZ73182.1| isoleucyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 969

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 39/193 (20%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERR--NEVISFV--KSG--LKDLSLSRKTFD----- 215
           F   A ++++ S  ES P++++  +R     +  FV  ++G  L D +++R+  D     
Sbjct: 482 FHPEAGRNRIGSMVESRPDWLISRQRAWGTPLAMFVDKETGVPLMDEAVNRRILDAIQDG 541

Query: 216 ----WGIKIPD-------DP-QY-----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
               W  ++PD       DP QY     I+ VW D+   +  T   L+  + S++   PA
Sbjct: 542 GSDAW-FELPDEHFLGDRDPAQYEKVVDILDVWFDSGATHAFT---LEGRNDSRS---PA 594

Query: 259 DLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIE 315
           DL++ G D  R  F +    +       P  K V +HGF     GEK+SKS GN ++P  
Sbjct: 595 DLYLEGSDQHRGWFQSSLLESCGTRGRAPY-KGVLTHGFTQDENGEKMSKSKGNTVEPQT 653

Query: 316 VIEEVGVDALRYF 328
           + +E G + LR +
Sbjct: 654 ITKESGAEILRLW 666


>gi|484950|pir||PN0474 valine-tRNA ligase (EC 6.1.1.9) (version 2) - human  (fragment)
          Length = 1051

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 121/311 (38%), Gaps = 80/311 (25%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +    L+  G+  N     + F+P  L   G DIL     +W A +      L
Sbjct: 584 VLDTWFSSGLFPLSILGW-PNQSEDLSVFYPGTLLETGHDIL----FFWVARMVMLGLKL 638

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV----------------------- 316
           +  LP  ++V+ H  +    G K+SKSLGNVIDP++V                       
Sbjct: 639 TGRLPF-REVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQRLLHNQLLNSNLDPSE 697

Query: 317 ---------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG-- 359
                          I E G DALR+ L   ++ G+D           +N D+   +G  
Sbjct: 698 VEKPKKRDRKLTPSGIPECGTDALRFGLCAYMSQGRD-----------INLDVNRILGYR 746

Query: 360 ---NLVSRSVSMILKDY-DGMIPTPGAFTESDESILS--VCSRVLQEIRENMQNQLIHRA 413
              N +  +    L+    G +P+P +     ES++   + SR+ + +R + Q    +  
Sbjct: 747 HFCNKLWNATKFALRGLGKGFLPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDF 806

Query: 414 LAQVIS-----LVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            A   S     L    D Y +  KP    + +   + A   LY  ++V  +   LL  F+
Sbjct: 807 PAVTTSQYSLWLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVAVR---LLSTFI 863

Query: 467 PKLANKIFDIL 477
           P +  ++F  L
Sbjct: 864 PFVTEELFQRL 874


>gi|319950371|ref|ZP_08024288.1| leucyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319435941|gb|EFV91144.1| leucyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 1030

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 74  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGTNVLHTLGYDAFGLPAEQYAV 133

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +V  + N  N       L + +D
Sbjct: 134 QTGQHPRVTTESNIANMERQLGRLGLGHD 162


>gi|314916453|gb|EFS80284.1| isoleucine--tRNA ligase [Propionibacterium acnes HL005PA4]
 gi|314917296|gb|EFS81127.1| isoleucine--tRNA ligase [Propionibacterium acnes HL050PA1]
 gi|314921669|gb|EFS85500.1| isoleucine--tRNA ligase [Propionibacterium acnes HL050PA3]
 gi|314930684|gb|EFS94515.1| isoleucine--tRNA ligase [Propionibacterium acnes HL067PA1]
 gi|314959391|gb|EFT03493.1| isoleucine--tRNA ligase [Propionibacterium acnes HL002PA1]
 gi|315102238|gb|EFT74214.1| isoleucine--tRNA ligase [Propionibacterium acnes HL046PA1]
 gi|327454485|gb|EGF01140.1| isoleucine--tRNA ligase [Propionibacterium acnes HL087PA3]
 gi|327456554|gb|EGF03209.1| isoleucine--tRNA ligase [Propionibacterium acnes HL083PA2]
 gi|328756249|gb|EGF69865.1| isoleucine--tRNA ligase [Propionibacterium acnes HL087PA1]
 gi|328759428|gb|EGF73044.1| isoleucine--tRNA ligase [Propionibacterium acnes HL025PA2]
          Length = 1107

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 118/292 (40%), Gaps = 61/292 (20%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGTDALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G ++  +AD A G G+          
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQALYARANGWSPAQGTQQ--DADPARGSGD---------S 730

Query: 371 KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + G++P   A T+    D  ++S  + +++++ E + N    R    +   V E+  +
Sbjct: 731 RGFGGVVPP--AVTQRHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFVDELSNW 788

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 789 YVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 836


>gi|307709597|ref|ZP_07646050.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619633|gb|EFN98756.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVRRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|302868937|ref|YP_003837574.1| leucyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302571796|gb|ADL47998.1| leucyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 946

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+     YP+ A  H+GH    I  D  AR+ R+ G +VL   G D  G    + A 
Sbjct: 58  EKLYVLDMFPYPSGAGLHVGHPLGYIGTDCYARYQRMAGRNVLHAMGFDAFGLPAEQYAV 117

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
             G   +   + N   +R+    L + +D+
Sbjct: 118 QTGTHPRTTTEANIERYREQLRRLGLGHDE 147


>gi|222111555|ref|YP_002553819.1| valyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221730999|gb|ACM33819.1| valyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 961

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 15/109 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLL--- 280
           ++  W  +     +T G+ +  DG+   +    P+ + V G DI+ F    W A ++   
Sbjct: 482 VLDTWYSSALVPFSTMGWPNQTDGATDDYNLYLPSSVLVTGYDIIFF----WVARMIMMT 537

Query: 281 ---SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
              +  +P  K V+ HG +L  +G+K+SKS GNV+DP+++I+ + ++ L
Sbjct: 538 THFTGRVPF-KHVYIHGLVLDAQGKKMSKSEGNVLDPVDLIDGIALEPL 585



 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+HR+ G + ++  GTD           +AG+ T++ V++ 
Sbjct: 73  HMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTD-----------HAGIATQIVVERQ 117


>gi|194883432|ref|XP_001975805.1| GG20362 [Drosophila erecta]
 gi|190658992|gb|EDV56205.1| GG20362 [Drosophila erecta]
          Length = 1049

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 596 PDQTKDLKTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 650

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 651 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAG 697


>gi|34540861|ref|NP_905340.1| valyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417357|sp|Q7MVD7|SYV_PORGI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|34397176|gb|AAQ66239.1| valyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 876

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFILH-----KGEKISKSLG 308
           ++P    V   DIL F    W A ++ A      KK F + ++       +G K+SKSLG
Sbjct: 484 YYPTSDLVTAPDILFF----WVARMIMAGYEYRGKKPFDNVYLTGIVRDGQGRKMSKSLG 539

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  DPI ++E+ G D +R  L+     G D  +D+   ++  N    N I N        
Sbjct: 540 NSPDPIMLMEKYGADGVRMGLMMAAPAGNDVLFDESLSEQGRN--FCNKIWNAFR----- 592

Query: 369 ILKDYDGMIPTPGAFTESDESILSV--CSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           ++K +     +    T+ + S L+V      L E++  + +      L++ ++LV ++  
Sbjct: 593 LVKGWQQAETS----TQPEASALAVKWFGYRLDEVKTELDDLFSKYRLSEALTLVYKL-- 646

Query: 427 YFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++D    W L+   P       +     T+    QL  LL  F+P +  +++  L
Sbjct: 647 FWDDFSSWYLEMVKPAYGQPMDAKTYGSTIGFFDQLLRLLHPFMPFITEELWHAL 701


>gi|33239720|ref|NP_874662.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81665019|sp|Q7VDV0|SYI_PROMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33237245|gb|AAP99314.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 969

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 19/114 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++ +     D  +      +PADL++ G D  R  F +    +  ++++ P
Sbjct: 555 MDVWFDSGSSWTSVISKSDELN------YPADLYLEGSDQHRGWFQSSLLTSVAVNSHAP 608

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
              KV +HGF L   G K+SKSLGN+IDP ++I            G D LR ++
Sbjct: 609 Y-LKVLTHGFALDENGRKMSKSLGNIIDPWKIINGGNNKKLEPAYGADVLRLWV 661



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   H+GHA   I+ D++ ++  L G  V F  G D HG  I
Sbjct: 69  YANGNLHMGHALNKILKDIINKYQILKGSKVRFVPGWDCHGLPI 112


>gi|260903301|ref|ZP_05911696.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107941|gb|EFO45481.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKGVAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|161486748|ref|YP_507351.2| isoleucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 1109

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + I +    ++  F+LS  L   P       HG +L  +G+K+SK L N 
Sbjct: 585 YFPADF--ITEYIAQTRGWFYTLFILSTALFDKPPFINCICHGVVLDTQGQKLSKRLNNY 642

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+++ ++ G DA+R+ ++   +  G D   DK+G   R
Sbjct: 643 ADPMQMFKQYGSDAMRFLMLSHTVLYGGDLLLDKEGTMIR 682


>gi|28897308|ref|NP_796913.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363892|ref|ZP_05776640.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876271|ref|ZP_05888626.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|81728462|sp|Q87S90|SYI_VIBPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28805517|dbj|BAC58797.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308092895|gb|EFO42590.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308112965|gb|EFO50505.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKGVAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|328773407|gb|EGF83444.1| hypothetical protein BATDEDRAFT_15609 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1104

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P DL   GKD++  H  ++  +  +A  P    P+ V  +G +L   EK++KS GN +
Sbjct: 681 FYPLDLRCSGKDLINNHLTFF-LYNHTAIFPKDKWPQAVRVNGHLLLNSEKMAKSTGNSL 739

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN--GIGNLVSRSVSMI 369
              E +E+ G DA R+ L    A   DG  D + ++K  +  +         +  SV++I
Sbjct: 740 SLSESLEKYGADATRFAL----ADAGDGLEDANFVEKTADDAILKLYTEKEWIEESVALI 795

Query: 370 LKD 372
            KD
Sbjct: 796 SKD 798


>gi|319898377|ref|YP_004158470.1| Isoleucyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402341|emb|CBI75880.1| Isoleucyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 971

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPAD++  G D  R  F +    +    A  P  K V +HGF L   G+K+SKSLGN I 
Sbjct: 595 WPADIYFEGSDQHRGWFQSSLLESCGTRACSPY-KAVVTHGFTLDENGKKMSKSLGNTIM 653

Query: 313 PIEVIEEVGVDALRYFLV 330
           P ++I+  G D  R +++
Sbjct: 654 PQDIIKTSGADIFRLWVM 671



 Score = 37.7 bits (86), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+R    +     Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 52  KDRPLYILHDGPPYANGNIHIGHALNKVLKDVIVRSFQMRGFNANYVPGWDCHGLPI 108


>gi|310778463|ref|YP_003966796.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 931

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+  ++ +     +N         PADL++ G D  R  F      +   + + 
Sbjct: 531 IMDVWFDSGVSHRSVLETRENLKR------PADLYLEGSDQHRGWFQTSLLTSIGSTGDA 584

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           P  K+V +HGF+   +G+K+SKS GNV+ P +VI+  G D LR +
Sbjct: 585 PY-KQVLTHGFVNDGEGKKMSKSTGNVMSPDDVIKTYGADILRLW 628



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTK 70
           Y N   HIGHA   I+ D++ ++ RL G +  +  G D HG  I  K  +  G   K
Sbjct: 60  YANGNIHIGHALNKILKDIILKYKRLQGYNAPYIPGWDTHGLPIELKVTEELGEAAK 116


>gi|188995093|ref|YP_001929345.1| valyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|254783555|sp|B2RK53|SYV_PORG3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|188594773|dbj|BAG33748.1| valyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 876

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 29/235 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFILH-----KGEKISKSLG 308
           ++P    V   DIL F    W A ++ A      KK F + ++       +G K+SKSLG
Sbjct: 484 YYPTSDLVTAPDILFF----WVARMIMAGYEYRGKKPFDNVYLTGIVRDGQGRKMSKSLG 539

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  DPI ++E+ G D +R  L+     G D  +D+   ++  N    N I N        
Sbjct: 540 NSPDPIMLMEKYGADGVRMGLMMAAPAGNDVLFDESLSEQGRN--FCNKIWNAFR----- 592

Query: 369 ILKDYDGMIPTPGAFTESDESILSV--CSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           ++K +          T+ + S L+V      L E++  + +      L++ ++LV ++  
Sbjct: 593 LVKGWQ----QAETATQPEASALAVKWFGYRLDEVKTELDDLFSKYRLSEALTLVYKL-- 646

Query: 427 YFDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++D    W L+   P       +     T+    QL  LL  F+P +  +++  L
Sbjct: 647 FWDDFSSWYLEMVKPAYGQPMDAKTYGSTIGFFDQLLRLLHPFMPFITEELWHAL 701


>gi|125717516|ref|YP_001034649.1| isoleucyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166229774|sp|A3CLP4|SYI_STRSV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125497433|gb|ABN44099.1| Isoleucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|221069982|ref|ZP_03546087.1| leucyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220715005|gb|EED70373.1| leucyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 902

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  KNKVPPAKWTYENIAYMKKQMQAMGLAIDWSRE--VATCDPEYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+  ++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRT-GALVEKREIPGYYLAITNYAQELLDH 205

Query: 180 YE 181
            +
Sbjct: 206 VQ 207


>gi|14590812|ref|NP_142884.1| leucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6919978|sp|O58698|SYL_PYRHO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|75765429|pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And
          Trna(Leucine) Complex
 gi|75765430|pdb|1WZ2|B Chain B, The Crystal Structure Of Leucyl-Trna Synthetase And
          Trna(Leucine) Complex
 gi|3257379|dbj|BAA30062.1| 967aa long hypothetical leucyl-tRNA synthetase [Pyrococcus
          horikoshii OT3]
          Length = 967

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAE 92



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D    GKD++  H      F +  ++ +      PK +  +GF   +G+K+SKS G
Sbjct: 601 WYPLDWRCSGKDLIPNHL----TFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKG 656

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 657 NVLNFIDAIEENGADVVRLYIM 678


>gi|242799487|ref|XP_002483390.1| valyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218716735|gb|EED16156.1| valyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1066

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ +       K +P      G DIL F    W A ++  +L L
Sbjct: 583 VLDTWFSSGLWPFATLGWPNTESHDYQKLFPTSTLETGWDILFF----WVARMIMLSLKL 638

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 K+V+ H  I   +G K+SKSLGNVIDP++V + + +DAL
Sbjct: 639 TGKVPFKEVYCHSLIRDSEGRKMSKSLGNVIDPLDVQKGITLDAL 683


>gi|153838772|ref|ZP_01991439.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747804|gb|EDM58694.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKGVAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|71029466|ref|XP_764376.1| valyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351330|gb|EAN32093.1| valyl-tRNA synthetase, putative [Theileria parva]
          Length = 1010

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           ++  W  +    L+T G+ D        F+P  L   G DI+ F    W A ++  +L  
Sbjct: 507 VLDTWFSSGLFPLSTLGWPDTDTSDFKSFFPTSLLETGNDIIFF----WVARMVMLSLHF 562

Query: 286 ---LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
              LP  +++ H  +   +GEK+SKS GNV+DPI++IE   ++ L
Sbjct: 563 VDMLPFNEIYMHPLVRDSRGEKMSKSKGNVVDPIDIIEGTTLERL 607



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           HIGHA  + I D L R+HR+ G   L+  GTD  G      A  + V   ++ D+N
Sbjct: 76  HIGHALTVSIQDCLTRWHRMKGDVTLWLPGTDHAG-----IATQSVVERTLYKDEN 126


>gi|172048411|sp|A8Z6P6|SYI_CAMC1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|158605024|gb|ABW74825.1| isoleucyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 918

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 8/106 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +       DN D  K   +PA +++ G D  R  F +    +  ++++ 
Sbjct: 538 ILDVWFDSGSTWHAVLQS-DNYDAGK---YPASMYLEGSDQHRGWFQSSLLVSTAINSHA 593

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  + + +HGF +  KGEK+SKS GNVI P +V +  GV+ LR ++
Sbjct: 594 PY-ESILTHGFTVDAKGEKMSKSKGNVIAPQDVAKTHGVEILRLWV 638



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 15/89 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---------KAAQNA 65
           Y N   HIGHA   I+ D++ + H   G +V +  G D HG  I          K  + +
Sbjct: 60  YANGHLHIGHALNKILKDIITKTHYFYGENVRYVPGWDCHGLPIEQQVEVKLGDKKKELS 119

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDF 94
            V  +    Q++R F      +DI  D+F
Sbjct: 120 KVEIRELCRQHAREF------IDIQRDEF 142


>gi|323352732|ref|ZP_08087702.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121768|gb|EFX93514.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|317475879|ref|ZP_07935136.1| valyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908039|gb|EFV29736.1| valyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 894

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 31/233 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 502 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 556

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+++I+  G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 557 GNSPDPLDLIDRYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFNNKIWNAFR---- 610

Query: 368 MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            ++K ++    +P P A   +     S  + V  E+ +      +  AL  V  L     
Sbjct: 611 -LIKGWEVSAEVPMPEAAGLAMRWFESKQNAVAAEVADLFGKYRLSEALMAVYKL----- 664

Query: 426 RYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++D    W L+   P         V   T+     L  LL  F+P +  +++
Sbjct: 665 -FWDEFSSWYLEMIKPAYGQPINKKVYETTIGFFDNLLHLLHPFMPFITEELW 716


>gi|315652483|ref|ZP_07905468.1| leucine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485272|gb|EFU75669.1| leucine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 804

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 102/233 (43%), Gaps = 43/233 (18%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-GEKIS 304
           K+ P D+++ G +    H +Y   +  FL    +     P   K+F+ G I    G+K+S
Sbjct: 523 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLHDIGVVDFDEPF-TKLFNQGMINGSDGQKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G DALR + +       D  +D  G++         G+   +++
Sbjct: 582 KSKGNVVSPDDLVRDYGCDALRMYELFVGPPELDADWDDRGIE---------GVARFLNK 632

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              +++ + D  +       E+D  +L V + ++ +I +      ++  +A  +   +++
Sbjct: 633 FYKLVMDNKDKNV-------EADRELLRVRANLISDIEQRFNAFSLNTVIAGFMEYNNKL 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       KKT  D+         E ++   ILL  F P +  ++++ L
Sbjct: 686 IELG--------KKTGVDK---------ETLKVFTILLAPFAPHIGEELWEEL 721



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 15/183 (8%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQVLKGHYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGV----TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           A   GV    +T   V    R   ++A + D  +D  + TT+ + +   + ++ ++  KG
Sbjct: 88  AIKMGVHPAKSTAENVANIKRQINEIAAIYD--WDREVNTTDPKFYKWTQWIFVQMFKKG 145

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDK 175
             Y+  +   +    +    ++EV  G   +   A  + N  QWM       +++AY D+
Sbjct: 146 LAYEKEFPINWCPSCKTGLANEEVVDGKCERCGTAVTKKNLRQWM------LKITAYADR 199

Query: 176 LLS 178
           LL+
Sbjct: 200 LLN 202


>gi|307069607|ref|YP_003878084.1| isoleucyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482867|gb|ADM89738.1| isoleucyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 929

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   + T    L N   +  KF PADL++ G D LR  F +    +   + ++
Sbjct: 533 ILDVWFDSGVTHYTI---LKNSYKNILKF-PADLYLEGIDQLRGWFQSSLITSIAYNNSI 588

Query: 285 PLPKKVFSHGFILHKGEK-ISKSLGNVIDPIEVIEEVGVDALR 326
           P  K + +HGF++ K +K +SKS+GN I P  +I + G +  R
Sbjct: 589 PY-KNLITHGFVIDKNKKKMSKSIGNTITPNNIINKYGTEIFR 630



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          Y N + HIGHA   I+ D++ +F  L+     F  G D HG
Sbjct: 59 YANGKIHIGHALNKILKDIIIKFKNLNFFYAPFILGWDCHG 99


>gi|253581993|ref|ZP_04859217.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836342|gb|EES64879.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 933

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 27/134 (20%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWP 257
           K GLK L L ++T             IM VW D+  ++   L T G L +         P
Sbjct: 517 KYGLKGLELRKET------------NIMDVWFDSGVSHRAVLETRGDLLHR--------P 556

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           AD+++ G D  R  F      +   + + P  KK+ +HGF+   +G+K+SKS+GN + P 
Sbjct: 557 ADMYLEGSDQHRGWFQTSLLTSIGSTHDAPF-KKILTHGFVNDGEGKKMSKSVGNTVVPA 615

Query: 315 EVIEEVGVDALRYF 328
           +VI+  G D LR +
Sbjct: 616 DVIKLYGADILRLW 629



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTK 70
           Y N + HIGHA   I+ D++ ++ RL G  V +  G D HG  I  K  +  G   K
Sbjct: 59  YANGEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKVTEKLGSKAK 115


>gi|145492782|ref|XP_001432388.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399499|emb|CAK64991.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1039

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           IK+  D + ++  W  +     +T G+ D        F+P  +   G DIL F       
Sbjct: 556 IKLSQD-EDVLDTWFSSGLFPFSTFGWPDVNHPDFKAFFPNTILETGWDILFFWVAKMVQ 614

Query: 278 FLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
           F L     +P K VF H  I  K G+K+SKSLGNVIDP+E+I+   ++ L+
Sbjct: 615 FSLEFFDKVPFKYVFLHPLIRDKDGKKMSKSLGNVIDPLEIIDGTSLENLK 665


>gi|212550691|ref|YP_002309008.1| valyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548929|dbj|BAG83597.1| valyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 873

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 46/252 (18%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLG 308
           ++P    V G DI+ F    W A ++ +     +K     V+  G +  + G K+SKSLG
Sbjct: 486 YYPTSDLVTGPDIIFF----WVARMIMSGYEFRQKPCFHNVYFTGIVRDRSGRKMSKSLG 541

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  +P+++I+  G D +R  L+   + G D F+D+   K+  N +  N I N        
Sbjct: 542 NSPEPLDLIDRYGADGVRMGLMLSASAGNDIFFDEILCKQGRNFN--NKIWNAFR----- 594

Query: 369 ILKDY---DGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +LK +   D   P   A T +  ES L++ ++       N+ N      +++  +LV   
Sbjct: 595 LLKRWQTADIEQPESSALTIQWFESQLNITAK-------NVNNSFAKYRISE--ALVDIY 645

Query: 425 DRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + D    W L+   P+    +      +T+     L  LL  F+P          F+ 
Sbjct: 646 KLFKDEFSAWYLEVIKPEYEQPIDKKTYQITLGFFDSLLKLLHPFIP----------FIT 695

Query: 481 DENRCFQSLDQR 492
           +E   +QSL++R
Sbjct: 696 EE--LWQSLEER 705


>gi|163787177|ref|ZP_02181624.1| leucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877065|gb|EDP71122.1| leucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 949

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G    V  + N + +R   D +  S+D
Sbjct: 89  AIQTGQHPAVTTEANIKTYRRQLDQIGFSFD 119


>gi|322377417|ref|ZP_08051908.1| isoleucine--tRNA ligase [Streptococcus sp. M334]
 gi|321281617|gb|EFX58626.1| isoleucine--tRNA ligase [Streptococcus sp. M334]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|212541196|ref|XP_002150753.1| valyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210068052|gb|EEA22144.1| valyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 1057

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +      T G+ +       K +P      G DIL F    W A ++  +L L
Sbjct: 574 VLDTWFSSGLWPFATLGWPNTESHDYQKLFPTSTLETGWDILFF----WVARMIMLSLKL 629

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 K+V+ H  I   +G K+SKSLGNVIDP++V   + +DAL
Sbjct: 630 TGKVPFKEVYCHSLIRDSEGRKMSKSLGNVIDPLDVQRGITLDAL 674


>gi|160914286|ref|ZP_02076507.1| hypothetical protein EUBDOL_00296 [Eubacterium dolichum DSM 3991]
 gi|158433913|gb|EDP12202.1| hypothetical protein EUBDOL_00296 [Eubacterium dolichum DSM 3991]
          Length = 908

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I+ DV+ R H +DG    +  G D HG  I  A    G   K    
Sbjct: 58  YANGDIHLGHALNKILKDVIVRSHFMDGYYTPYIPGWDTHGLPIETAITKLGHDRKKMGI 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDD-FIRTTEKRHHDTCRILWKKISDKG 117
                         V++  + F  +  V D  YD+ ++  T++   +  RI  K   D G
Sbjct: 118 SEFRKLCYDYALEQVERQKKGFLSLGSVGD--YDNAYVTLTKEFEEEQIRIFGKMAMD-G 174

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYKG    ++S   E+   + E+
Sbjct: 175 LIYKGLKPVYWSPSSESALAEAEI 198



 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 11/104 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++   TG +      K   +PADL+  G D  R  F++       +    P
Sbjct: 524 MDVWFDSGSSH---TGAM----LKKGLSYPADLYFEGSDQYRGWFNSSLIVGTAVHGQAP 576

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             K+V SHGF++  KG K+SKS  N + P E+ ++ G D LR +
Sbjct: 577 Y-KQVLSHGFVMDGKGVKMSKSQWNAVAPGEITKKFGADILRLW 619


>gi|18977262|ref|NP_578619.1| leucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32171573|sp|Q8U2E6|SYL_PYRFU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|18892929|gb|AAL81014.1| leucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 967

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+
Sbjct: 34 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAE 92



 Score = 43.5 bits (101), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D     KD++  H  ++  F   A  P    PK +  +GF   +G+K+SKS GNV+
Sbjct: 601 WYPLDWRCSAKDLIPNHLTFF-IFNHVAIFPEKHWPKGIAVNGFGTLEGQKMSKSKGNVL 659

Query: 312 DPIEVIEEVGVDALRYFLV 330
           + I+ IEE G D +R +++
Sbjct: 660 NFIDAIEENGADVVRLYIM 678


>gi|308490640|ref|XP_003107512.1| CRE-VARS-2 protein [Caenorhabditis remanei]
 gi|308251880|gb|EFO95832.1| CRE-VARS-2 protein [Caenorhabditis remanei]
          Length = 1049

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 12/103 (11%)

Query: 248 PDGSKAK--FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEK 302
           PD +K    F+P+ +   G DIL F    + + A  L+  LP  K++  H  I    G K
Sbjct: 582 PDNTKDMDLFFPSAVLETGHDILFFWVARMVFMAQELTGKLPF-KEILLHAMIRDAHGRK 640

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
           +SKSLGNVIDP++VI  V ++ L+  L+      +EI   K G
Sbjct: 641 MSKSLGNVIDPLDVIRGVTLEGLQSQLLSGNLDEKEIVVAKAG 683



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 23/99 (23%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D + RF+R+ G   LF  G D           +AG+ T+V V++  +  
Sbjct: 132 HVGHALATTVEDTITRFNRMHGKRTLFNPGCD-----------HAGIATQVVVEKRLKRE 180

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           R +    D+  D F +            +W   ++KGD+
Sbjct: 181 RGLTR-HDLGRDRFNQE-----------VWHWKNEKGDV 207


>gi|302336827|ref|YP_003802033.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634012|gb|ADK79439.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 806

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 9/86 (10%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIY---WPAFLL---SANLPLP-KKVFSHGFILHKGE-K 302
           K  +W P DL+V G +    H +Y   W   L    + N   P +++ + G IL +G  K
Sbjct: 524 KIDYWMPVDLYVGGAEHAVLHLLYSRFWHKVLHEIGAVNTTEPFQRLVNQGMILGEGGVK 583

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYF 328
           +SKSLGNVI+P ++I+E G D++R +
Sbjct: 584 MSKSLGNVINPDDIIKEYGADSMRVY 609



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++Y+     YP++Q  H+GH       D+  R+ R++G +VL   G D  G      A 
Sbjct: 38  KRVYVLDMFPYPSSQGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGFDSFGLPAENYAI 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   K   + N   FR     L  SYD
Sbjct: 98  KTGTHPKATTESNIDMFRSQIKRLGFSYD 126


>gi|256819789|ref|YP_003141068.1| leucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581372|gb|ACU92507.1| leucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 1146

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+ A  H+GH    I +D++AR+ R  G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIVARYKRHKGFNVLHPQGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G    +   QN   +R+  D +  S+D
Sbjct: 90  IQTGQHPALTTAQNIARYREQLDKMGFSFD 119



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 41/181 (22%)

Query: 301  EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            EK+SKS  NV++P ++ E+ G D LR +         + F       K  N    +G+ N
Sbjct: 920  EKMSKSKYNVVNPDDICEQYGADTLRLY---------EMFLGPLEQAKPWNTAGISGVYN 970

Query: 361  LVSRSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             + +   +   D    +    PTP         +L    + ++++ E+++N   + +++Q
Sbjct: 971  FLRKLWRLYFNDNGWQVTDEAPTP--------EMLKALHKTIKKVNEDIENFSFNTSVSQ 1022

Query: 417  VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +  V+E+                    ST+     +++  LA+L+  F P ++ +++  
Sbjct: 1023 FMICVNEL--------------------STLKCHHRDILAPLAVLVAPFAPHISEELWKR 1062

Query: 477  L 477
            L
Sbjct: 1063 L 1063


>gi|156973299|ref|YP_001444206.1| isoleucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166229779|sp|A7MTD6|SYI_VIBHB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|156524893|gb|ABU69979.1| hypothetical protein VIBHAR_00980 [Vibrio harveyi ATCC BAA-1116]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|153834658|ref|ZP_01987325.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868910|gb|EDL67968.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|121595217|ref|YP_987113.1| valyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607297|gb|ABM43037.1| valyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 976

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 15/109 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLL--- 280
           ++  W  +     +T G+ +  DG+   +    P+ + V G DI+ F    W A ++   
Sbjct: 497 VLDTWYSSALVPFSTMGWPNQTDGATDDYNLYLPSSVLVTGYDIIFF----WVARMIMMT 552

Query: 281 ---SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
              +  +P  K V+ HG +L  +G+K+SKS GNV+DP+++I+ + ++ L
Sbjct: 553 THFTGRVPF-KHVYIHGLVLDAQGKKMSKSEGNVLDPVDLIDGIALEPL 600



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+HR+ G + ++  GTD           +AG+ T++ V++ 
Sbjct: 88  HMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTD-----------HAGIATQIVVERQ 132


>gi|68171670|ref|ZP_00545031.1| Isoleucyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998905|gb|EAM85596.1| Isoleucyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599878|gb|ABD45347.1| isoleucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 1122

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNV 310
           ++PAD   I + I +    ++  F+LS  L   P       HG +L  +G+K+SK L N 
Sbjct: 598 YFPADF--ITEYIAQTRGWFYTLFILSTALFDKPPFINCICHGVVLDTQGQKLSKRLNNY 655

Query: 311 IDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKR 349
            DP+++ ++ G DA+R+ ++   +  G D   DK+G   R
Sbjct: 656 ADPMQMFKQYGSDAMRFLMLSHTVLYGGDLLLDKEGTMIR 695


>gi|319939619|ref|ZP_08013978.1| isoleucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811208|gb|EFW07514.1| isoleucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGYYAPYIPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+A+ L +  D  +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLAEYLKLCRDYALSQVDKQREDFKRLGVSGDWEHPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|309362614|emb|CAP27936.2| CBR-VARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 1075

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 20/112 (17%)

Query: 248 PDGSKAK--FWPADLHVIGKDILRFHA--IYWPAFLLSANLP---------LPKKVFSHG 294
           PD +K    F+P+ +   G DIL F    + + A  L+  LP         L K++  H 
Sbjct: 590 PDNTKDMDLFFPSAVLETGHDILFFWVARMVFMAQELTGKLPFKVIKGVRILKKEILLHA 649

Query: 295 FILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            I    G K+SKSLGNVIDP++VI  V ++ L+  L+      +EIA  K G
Sbjct: 650 MIRDAHGRKMSKSLGNVIDPLDVIRGVTLEGLQAQLLSGNLDEKEIAVAKAG 701



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 11/64 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D + RF+R+ G   LF  G D           +AG+ T+V V++  +  
Sbjct: 140 HVGHALATTVEDTITRFNRMHGKRTLFNPGCD-----------HAGIATQVVVEKRLKRE 188

Query: 81  RDMA 84
           R + 
Sbjct: 189 RGLT 192


>gi|296876951|ref|ZP_06900995.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431986|gb|EFH17789.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  +  ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWDH-PYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|226943309|ref|YP_002798382.1| isoleucyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511493|sp|C1DPH5|SYI_AZOVD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226718236|gb|ACO77407.1| isoleucyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 943

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+       +  + P  + + +HGF +   G K+SKSLGNVI P 
Sbjct: 562 ADLYLEGSDQHRGWFHSSLLTGAAIDGHAPY-RGLLTHGFTVDENGRKMSKSLGNVIAPQ 620

Query: 315 EVIEEVGVDALRYFL 329
           E+ + +G D LR ++
Sbjct: 621 EITDSMGADILRLWV 635



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R+K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 48  RQKFILHDGPPYANGNIHIGHAVNKILKDMIVRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|328787158|ref|XP_395202.3| PREDICTED: valyl-tRNA synthetase isoform 1 [Apis mellifera]
          Length = 1146

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 22/180 (12%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K   K L +S       I +  DP  ++  W  +     +  G+ D  +  +A F+P  L
Sbjct: 551 KKAAKQLGISAD----NIIVEQDPD-VLDTWFSSGLFPFSIFGWPDKTEEFEA-FYPGTL 604

Query: 261 HVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
              G DIL F    W A +      L   LP  K+V+ H  +    G K+SKSLGNVIDP
Sbjct: 605 LETGHDILFF----WVARMVFLGQKLIGKLPF-KEVYLHAMVRDAHGRKMSKSLGNVIDP 659

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI  + ++ L   L+      K+  Y  +G K+    D   GI    + ++   L  Y
Sbjct: 660 MDVINGISLEDLHKQLMNSNLDPKEYKYAIEGQKR----DFPQGIPECGTDALRFALCAY 715



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 23/98 (23%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    + D + R++R+ GL  L+  G D           +AG+ T+V V++     
Sbjct: 141 HLGHALTNAVEDAITRWNRMKGLTTLWNPGCD-----------HAGIATQVVVEKKLWK- 188

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +     DI  ++FI             +WK   +KGD
Sbjct: 189 EEQKTRHDIGRENFIEK-----------VWKWKEEKGD 215


>gi|322834559|ref|YP_004214586.1| valyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169760|gb|ADW75459.1| valyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 951

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +     KA F P+ + V G DI+ F    W A ++   +  
Sbjct: 472 VLDTWFSSGLWTFSTLGWPEQTPDLKA-FHPSSVVVSGFDIIFF----WIARMIMMTMHF 526

Query: 287 PK-----------KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV-------------- 320
            K            V+  G I   +G+K+SKS GNVIDP+++I+ +              
Sbjct: 527 VKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMM 586

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 587 QPQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRN--FCNK 644

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +D D G+       + +D  IL+  +R ++  RE M N     A + 
Sbjct: 645 LWN-ASRFVLMNTEDQDCGLNGGELELSLADRWILAEYNRTVKSYREAMDNYRFDLAASI 703

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  +   N  +     +  VEV+  L  L    +P +   I+
Sbjct: 704 LYEFTWNQFCDWYLELTKP-VMNGGNEAQLRGTRHTLVEVLEGLLRLAHPIIPFITETIW 762



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA++  I D + R+ R+ G + L+  GTD           +AG+ T++ V++
Sbjct: 49 HMGHAFQQTIMDAMIRYQRMQGKNTLWQAGTD-----------HAGIATQMVVER 92


>gi|194754701|ref|XP_001959633.1| GF11945 [Drosophila ananassae]
 gi|190620931|gb|EDV36455.1| GF11945 [Drosophila ananassae]
          Length = 1048

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 595 PDKTKDLETFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 649

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 650 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAG 696


>gi|159469446|ref|XP_001692874.1| valyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158277676|gb|EDP03443.1| valyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 574

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 248 PDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------ 299
           P+G+    KF+P  L   G DIL     +W A ++   + L  KV      LH       
Sbjct: 300 PEGTPDLDKFYPTSLLETGHDIL----FFWVARMVMMGIQLTGKVPFKQVYLHAMVRDAH 355

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDAL 325
           G K+SKSLGNVIDP+ VIE + +  L
Sbjct: 356 GRKMSKSLGNVIDPLHVIEGISLQGL 381


>gi|66817142|ref|XP_642469.1| valyl tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74861616|sp|Q86KU2|SYVC_DICDI RecName: Full=Probable valyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Valine--tRNA ligase; Short=ValRS
 gi|60470561|gb|EAL68540.1| valyl tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1072

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 22/129 (17%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P  L   G DIL F    W A +      L+  LP  ++VF H  +    G K+SKSL
Sbjct: 619 YYPTSLLETGSDILFF----WVARMVMMGQQLTGKLPF-EQVFLHAMVRDSHGRKMSKSL 673

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR---VNADLANGIGNLVSR 364
           GNVIDP +VI+ + +D L       IA   +G  D   ++K    V +D   GI    + 
Sbjct: 674 GNVIDPNDVIKGISLDEL-------IAKLYEGNLDSKEIEKATSGVKSDFPTGIAECGTD 726

Query: 365 SVSMILKDY 373
           ++   L  Y
Sbjct: 727 AMRFALCAY 735


>gi|227506270|ref|ZP_03936319.1| leucyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227197135|gb|EEI77183.1| leucyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 951

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EKL I     YP+ A  H+GH    I  D  AR++R+ G +VL T G D  G    + A
Sbjct: 53  KEKLNIQDMFPYPSGAGLHVGHPLGYIATDTYARYNRMLGKNVLHTLGYDAFGLPAEQYA 112

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +     N  N R    +L + +D
Sbjct: 113 IQTGTHPRTTTMANIENMRRQLGLLGLGHD 142


>gi|118589091|ref|ZP_01546498.1| valyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118438420|gb|EAV45054.1| valyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 976

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 11/122 (9%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G K+    + ++  W  +     +T G+  N      +++  D+ + G DI+ F    W 
Sbjct: 533 GGKVLTRDEDVLDTWFSSALWPFSTLGW-PNKTPELERYYKTDVLITGLDIIFF----WV 587

Query: 277 AFLLSANL------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L      P     F+   +  KG+K+SKS GNVIDP+++I   G DA R+ L 
Sbjct: 588 ARMMMQGLHFMDEVPFHTVYFNSIVVDGKGKKMSKSTGNVIDPLDLIGRFGADATRFALA 647

Query: 331 RE 332
            +
Sbjct: 648 SQ 649



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N   H+GHA    + D+L R+ R+ G D L+  GTD  G
Sbjct: 48 NGSLHMGHALNNTLQDILIRWKRMQGFDTLWQPGTDHAG 86


>gi|23009422|ref|ZP_00050476.1| COG0060: Isoleucyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 570

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           V +HGF+L  KGEK+SKS GNV+ P  VI+E G D LR ++ 
Sbjct: 442 VLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESGADILRLWVA 483


>gi|325203294|gb|ADY98747.1| valyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 945

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    +  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETEELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + ++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLEKL 575



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|242398250|ref|YP_002993674.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264643|gb|ACS89325.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 958

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 30/58 (51%)

Query: 6  KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+
Sbjct: 31 KFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAE 88



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D     KD++  H      F +  ++ +      P+ +  +GF   +G K+SKS G
Sbjct: 593 WYPLDWRCSAKDLIPNHL----TFFIFNHVAIFRKKHWPRGIAVNGFGTLEGAKMSKSKG 648

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 649 NVLNFIDAIEENGADVVRLYIM 670


>gi|145345960|ref|XP_001417466.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577693|gb|ABO95759.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1094

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 255 FW-PADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           FW P DL V GKD+++ H   AIY    +       P+   ++G +L   EK+SKS GN 
Sbjct: 671 FWYPFDLRVSGKDLIQNHLTFAIYNHTAIWEDEKMWPRSFRTNGHLLLNNEKMSKSTGNF 730

Query: 311 IDPIEVIEEVGVDALRYFLV 330
               + IEE   DA+R+ L 
Sbjct: 731 KTLKQAIEEFSADAMRFTLA 750


>gi|260061487|ref|YP_003194567.1| isoleucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785619|gb|EAR16788.1| isoleucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 1134

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 4/93 (4%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PAD    G D  R  F+ ++    L+  ++   + V S+G +L K G+K+SK LGN +DP
Sbjct: 635 PADFIAEGVDQTRGWFYTLHAIGTLVFDSIAY-RNVLSNGLVLDKEGKKMSKRLGNAVDP 693

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            + +++ G DA R++++       +  +D DG+
Sbjct: 694 FQTMDDHGPDATRWYMIANANPWDNLKFDMDGI 726



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVT-----TK 70
           N  P I H     I D+  R+  + G  V    G D HG  +    +   G+T     TK
Sbjct: 52  NGMPGIHHVMARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPVELGVEKELGITKEDIGTK 111

Query: 71  VFVDQNSRNFRDM----ADVLD---------ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           + V+  +   +       DV +         +  +D   T + ++ +T   L K+I DKG
Sbjct: 112 ISVEAYNEACKKAVMRYTDVWNNLTEQLGYWVDMEDPYVTYKSKYMETVWWLLKQIYDKG 171

Query: 118 DIYKG 122
            IYKG
Sbjct: 172 LIYKG 176


>gi|325571365|ref|ZP_08146865.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325155841|gb|EGC68037.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 931

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELT----FPADMYLEGSDQYRGWFNSSITTSVAINEVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN I P +VI ++G D LR ++
Sbjct: 576 PY-KAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV 620



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGH+   I  D++ R   + G    +  G D HG  I +   N G+  K    
Sbjct: 58  YANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGIKRKEMSL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +    D  +  +I  T        R+   K+++KG 
Sbjct: 118 AEYRKKCEEYALTQVDTQRADFKRLGVSGDWDH-PYITLTPDYEAAEIRVF-GKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|325973370|ref|YP_004250434.1| valyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651972|gb|ADX98054.1| valyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 833

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFILH-KGEKISKSL 307
           +F+P    V GKDIL      W + ++  +L     P  K +F HG + + KGEK+SKSL
Sbjct: 432 RFFPFSTLVSGKDIL----FPWISRMIYLSLHFNAKPPFKNIFLHGILRNSKGEKMSKSL 487

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           GN I P E+  +   D +R+  +      +D  Y ++  +K +N
Sbjct: 488 GNGILPEELYSKYSSDVIRFAFLSNTHFDRDIKYSENIFQKPIN 531


>gi|309379125|emb|CBX22256.1| valyl-tRNA synthetase [Neisseria lactamica Y92-1009]
          Length = 945

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+    +  KA F P+++ V G +I+ F    W A ++      
Sbjct: 476 VLDTWFSSALVPFSTLGWPSETEELKA-FLPSNVLVTGYEIIFF----WVARMIMMTTHF 530

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  K V+ HG +  H+G+K+SKS GNVIDP+++I+ + ++ L
Sbjct: 531 TGKVPF-KDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLEKL 575



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R++R+ G +  +  GTD           +AG+ T++ V++ 
Sbjct: 49 HMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTD-----------HAGIATQIVVERQ 93


>gi|195013564|ref|XP_001983862.1| GH16130 [Drosophila grimshawi]
 gi|193897344|gb|EDV96210.1| GH16130 [Drosophila grimshawi]
          Length = 991

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGE 301
           P+ +  + +P DL   G DI+     +W A ++   L L      +++  +G +   +G 
Sbjct: 538 PNETYKQVYPLDLMQTGHDII----FFWVARMMMMGLKLTGEAPFQRILLNGIVCDAQGR 593

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           K+SKSLGN++ P +V++   +D+L+  L +    G
Sbjct: 594 KMSKSLGNIVSPQQVVQGASLDSLKAVLQQSCDAG 628


>gi|154291650|ref|XP_001546406.1| hypothetical protein BC1G_15093 [Botryotinia fuckeliana B05.10]
 gi|150846674|gb|EDN21867.1| hypothetical protein BC1G_15093 [Botryotinia fuckeliana B05.10]
          Length = 1124

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P DL V GKD++  H  ++    ++   P   PK V ++G +L  GEK+SKS GN + 
Sbjct: 703 WYPLDLRVSGKDLIPNHLTFFLYIHIAIFPPDYWPKGVRANGHLLLNGEKMSKSTGNFMT 762

Query: 313 PIEVIEEVGVDALRYFLV 330
             ++I + G DA R  L 
Sbjct: 763 LFDMINKYGADASRIALA 780


>gi|332044662|gb|EGI80856.1| leucyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 1020

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G    V  + N + +R   D +  S+D
Sbjct: 89  AIQTGQHPAVTTETNIKTYRRQLDQIGFSFD 119


>gi|269962529|ref|ZP_06176877.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832724|gb|EEZ86835.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|256078461|ref|XP_002575514.1| isoleucine--tRNA ligase [Schistosoma mansoni]
 gi|238660754|emb|CAZ31747.1| isoleucine--tRNA ligase [Schistosoma mansoni]
          Length = 1257

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 22/237 (9%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVI 311
           +PAD    G D  R    ++   +LS  L   P  + +  +G +L   G+K+SK   N  
Sbjct: 564 FPADFIAEGIDQTR--GWFYTLLVLSTALFDQPPFRNLIVNGIVLASDGQKMSKRAKNYP 621

Query: 312 DPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK---KRVNADLANGIGNLVSRSVS 367
           DP+EVI + G D LR +L+   +   ++  + + G+    K V     N +  L+  S+ 
Sbjct: 622 DPVEVINKHGADPLRLYLINSPVVRAQNLRFSESGVHEIVKDVFLPWCNALRFLIESSIF 681

Query: 368 MILKDYDGM-------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              K    +        P+   F   D  ILS    ++  + E +    ++  + +++  
Sbjct: 682 PYQKTTHQLFIVKSDEFPSTNNFM--DRWILSFTQSLILFVHEELSGYRLYTVVPRLVKF 739

Query: 421 VSEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  +  ++       LK     N D     L+  ++VI Q+  L+  F P +   I+
Sbjct: 740 IDHLVNWYVRMNRKRLKGDVVENQDDWKAALHTLLKVIYQITCLMSPFTPFITEFIY 796


>gi|328773785|gb|EGF83822.1| hypothetical protein BATDEDRAFT_84552 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1075

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 25/250 (10%)

Query: 248 PDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-G 300
           P  +K KF   +PAD    G D  R    ++   +L+A+L   P  K V  +G IL   G
Sbjct: 546 PFENKEKFEASFPADFIAEGIDQTR--GWFYTLTVLAAHLFDKPAFKNVIVNGLILASDG 603

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIG 359
           +K+SK L N  DP++V+   G D LR +L+   A   +   + ++G+K  ++  +     
Sbjct: 604 KKMSKRLKNYPDPMDVLNSYGADVLRLYLITSPAVRAESSRFREEGVKDMISKVMLPWYN 663

Query: 360 --NLVSRSVSMILKD------YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                   ++++ K+      Y+  +         D  IL+    ++  +++ M    ++
Sbjct: 664 AYRFFFAQLALLKKEHNFDFVYNSHLDLSKDQNIMDIWILASTQSLIAFVKQEMTAYRLY 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVP 467
               +++ L+  +  ++       LK  N     +RA  VL+   EV+  L  L+ AF P
Sbjct: 724 TVTPRLLKLIDTLTNWYVRFNRKRLKGENGVADAERALNVLF---EVLFTLCRLMAAFAP 780

Query: 468 KLANKIFDIL 477
            L   ++  L
Sbjct: 781 FLTETMYQNL 790


>gi|150024327|ref|YP_001295153.1| isoleucyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149770868|emb|CAL42333.1| Isoleucine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 1133

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F+ ++    L+   +   K V S+G +L K G+K+SK LGN 
Sbjct: 632 KDFPADFIAEGVDQTRGWFYTLHAIGTLVFDKVAY-KNVVSNGLVLDKNGQKMSKRLGNA 690

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            DP E + E G DA R++++       +  +D +G+
Sbjct: 691 ADPFETLTEYGPDATRWYMISNANPWDNLKFDLEGI 726


>gi|149021249|ref|ZP_01835495.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930350|gb|EDK81334.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+      +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPE----LIYPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   ++++KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|119476949|ref|ZP_01617230.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449756|gb|EAW30993.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 939

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +  G  D          PAD+++ G D  R  F +    +  ++   P  
Sbjct: 537 VWFDSGVTHASVLGRRDELTC------PADIYMEGSDQHRGWFQSSLLTSVAVNGFAPY- 589

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  +G K+SKS+GN I P  VI  +G D LR ++ 
Sbjct: 590 KQVLTHGFTVDTEGRKMSKSIGNTIAPQTVIGTLGADVLRLWVA 633



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 55/139 (39%), Gaps = 21/139 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E+  +     Y N + HIGHA   II D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGNEQFILHDGPPYANGEIHIGHALNKIIKDMIVKSKTMSGFDSPYIPGWDCHGLPIELN 105

Query: 59  -AKAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIR-------------TTEKRHH 103
             K    AGV  +  +  Q  R +      +DI   DF+R                +   
Sbjct: 106 VEKKIGKAGVKVEPSIFRQKCREYAHRQ--VDIQKKDFVRLGVLGDWDNPYLTMNFQNEA 163

Query: 104 DTCRILWKKISDKGDIYKG 122
           D  R L  KI+D G + KG
Sbjct: 164 DIIRTL-GKIADNGHLQKG 181


>gi|22327660|ref|NP_199714.2| OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/
           catalytic/ isoleucine-tRNA ligase/ nucleotide binding
           [Arabidopsis thaliana]
 gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1093

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L   +G     +PAD+++ G D  R  F +    +       P
Sbjct: 653 MDVWFDSGSSW---AGVLGKREGLS---FPADVYLEGTDQHRGWFQSSLLTSIATQGKAP 706

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  VIE
Sbjct: 707 Y-SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIE 739


>gi|299065945|emb|CBJ37126.1| Isoleucine--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 960

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 20/230 (8%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+    A +L    P  K + +HGF +  +G K+SKS+GN I P 
Sbjct: 588 ADLYLEGSDQHRGWFHSSLLTASMLYGKPPY-KALLTHGFTVDGEGRKMSKSIGNTIAPQ 646

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+  ++G + +R ++      G+    D+  + KRV  +    I N + R +   L DYD
Sbjct: 647 EIAGKMGAEIIRLWVASTDYSGELAISDE--ILKRV-VESYRRIRNTL-RFLLANLTDYD 702

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                +P P  + E D   +++   + +EI  +      H  ++++ +  SE     Y D
Sbjct: 703 HAKHALP-PEQWLEIDRYAVALTDALQKEILSHYDVYEFHPVVSKLQTFCSEDLGGFYLD 761

Query: 430 AQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K   L  T PD      A   LY   + +        +F  + A ++F
Sbjct: 762 VLKD-RLYTTAPDSVARRSAQNALYHITQAMLHWMAPFLSFTAEEAWQVF 810



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  +K  +     Y N   H+GHA   I+ D++ +   L GLD ++  G D HG  I   
Sbjct: 55  KGAKKFILHDGPPYANGDLHLGHAVNKILKDMVIKSRGLTGLDAVYVPGWDCHGMPIEIQ 114

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
                 K      V  K       +  R   D     VL    D ++    +   D  R 
Sbjct: 115 IEKQFGKGLPVQEVQEKARAYATGQIARQKVDFERLGVLGDWADPYLTMNFRNEADEVRA 174

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 175 L-GKILEKGYVFRG 187


>gi|251794004|ref|YP_003008736.1| isoleucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535403|gb|ACS98649.1| isoleucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 940

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 526 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHR--GWFMSSL 574

Query: 279 LLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS    N    K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 575 MLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-- 392
            G+    D+  + KR  AD    I N    +   +L + +G  P   A    D   L   
Sbjct: 635 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPQRDAVKPEDMMSLDRW 687

Query: 393 --VCSRVLQ-EIRENMQNQLIHRALAQVISLVS 422
              C+   Q EI++   N   H  + +++   S
Sbjct: 688 AVACALDAQKEIKDAYDNYQFHAVVQRLMRFCS 720


>gi|167749675|ref|ZP_02421802.1| hypothetical protein EUBSIR_00633 [Eubacterium siraeum DSM 15702]
 gi|167657298|gb|EDS01428.1| hypothetical protein EUBSIR_00633 [Eubacterium siraeum DSM 15702]
          Length = 1061

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 23/236 (9%)

Query: 248 PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           P  +K KF   +PAD      D  R  F+++   + LL    P  K V   G +L K G+
Sbjct: 554 PFENKEKFEQQFPADFISEAVDQTRGWFYSLLAISTLLFNKAPY-KNVIVLGLVLDKDGQ 612

Query: 302 KISKSLGNVIDPIEVIEEVGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           K+SKS GN +DP E + E G DA+R YF         + F+      K VN      I  
Sbjct: 613 KMSKSKGNAVDPFESLAEHGADAIRWYFYTNSAPWLPNRFH-----AKAVNEGQRKYIST 667

Query: 361 LVSRSVSMIL----KDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           L +     +L     ++D    T      +  D+ +LS  + V+ E+ +N+ N  I  A 
Sbjct: 668 LWNTYAFYVLYANIDNFDATKYTLDVDKLSVMDKWLLSRLNTVVGEVDDNLANYRIPEAA 727

Query: 415 AQVISLVSEVDRYF---DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFV 466
             +   V E+  ++     ++ W  + T     A   LY  +  I + +  +  FV
Sbjct: 728 RALQDFVDEMSNWYVRRSRERFWSKELTQDKINAYMTLYTALVTIAKTSAPMTPFV 783



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           N +PHIGH    +I D++ R+  + G DV    G D HG
Sbjct: 65  NGKPHIGHVLTRVIKDMIPRYRTMKGYDVPRKAGWDTHG 103


>gi|42523714|ref|NP_969094.1| isoleucyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|81617068|sp|Q6MKX0|SYI_BDEBA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39575921|emb|CAE80087.1| isoleucyl-tRNA synthetase (IleRS) [Bdellovibrio bacteriovorus
           HD100]
          Length = 1056

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 11/126 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++  W ++ +      GY +       K +PAD    G D  R  F+ +      L    
Sbjct: 526 VLDCWFESGSMPYAQWGYPETSVEDFKKAFPADFIAEGLDQTRGWFYTLSIIGTALFNQA 585

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV-------REIACG 336
           P  K V  +G +L + G K+SKSL N  DP+EV+ + G DALR +L+       +E+   
Sbjct: 586 PF-KNVVVNGLVLAEDGRKMSKSLKNYPDPMEVLNQHGADALRLYLIDSPVVKAQELKFS 644

Query: 337 KDGFYD 342
           + G YD
Sbjct: 645 EKGVYD 650


>gi|304321152|ref|YP_003854795.1| valyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300054|gb|ADM09653.1| valyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 891

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 11/118 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+  +    K  F+P  +     DI+ F    W A ++   L L
Sbjct: 464 VLDTWFSSALWPFSTLGWPQDETEVKT-FYPTAVLSTAFDIIFF----WVARMMMMGLHL 518

Query: 287 P-----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 ++V+ H  +   +G+K+SK+ GNVIDP+E ++  G D+LR+ L      G+D
Sbjct: 519 QGDVPFRQVYIHALVRDAQGQKMSKTKGNVIDPLEKMDAYGTDSLRFTLAAMATPGRD 576



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 15/69 (21%)

Query: 12  AIAYP----NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           AI +P      + H+GHA    + D+L R++R+ G +VL+  GTD           +AG+
Sbjct: 43  AIVFPPPNVTGRLHMGHALNATLQDILIRYNRMRGKNVLWQVGTD-----------HAGI 91

Query: 68  TTKVFVDQN 76
            T++ V++ 
Sbjct: 92  ATQMMVERQ 100


>gi|322804454|emb|CBZ02004.1| leucyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 813

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 36/239 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 516 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMS 574

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P + I+E G D  R +L+      + G +  D +K          IG  V R
Sbjct: 575 KSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIK---------SIGKFVDR 625

Query: 365 SVSMILKDYDGMIPTP--GAFT-ESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISL 420
            V  IL++    I       FT + DE  L+ V    ++ I E++     + ++A+++  
Sbjct: 626 -VERILENAREEIKNSKDNKFTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEF 684

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + + +Y  +     L+  +  R S + ++T         LL  F P  A + ++++ +
Sbjct: 685 TNALSKYLGSDT---LRNASFLRESIIDFIT---------LLAPFAPHFAEEQWELIGI 731



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 15/180 (8%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             G+  K   D   +N   M   L       ++++ + T    ++   + L+ K+ +KG 
Sbjct: 91  KTGIHPK---DSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y K     W    +    N+  +    DG+      N V     E +F +++ Y D+LL
Sbjct: 148 AYKKKAPVNWCPSCNTVLANEQVL----DGKCERCDSN-VDKKNLEQWFLKITDYADELL 202


>gi|322392785|ref|ZP_08066243.1| isoleucine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144363|gb|EFX39766.1| isoleucine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 930

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G + N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVIVNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEIER 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D  +  ++  T        R+   ++++KG 
Sbjct: 118 SEYLKMCREYALSQVDKQREDFKRLGVSGDWDH-PYVTLTPDYEAAQIRVF-GQMANKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|187777309|ref|ZP_02993782.1| hypothetical protein CLOSPO_00861 [Clostridium sporogenes ATCC
           15579]
 gi|187774237|gb|EDU38039.1| hypothetical protein CLOSPO_00861 [Clostridium sporogenes ATCC
           15579]
          Length = 1038

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 294 GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +L K G K+SKS GNV++P +V+E  G DA R+      A      + ++ +K+    
Sbjct: 581 GHVLDKHGVKMSKSKGNVVEPFDVLENEGADATRWHFYTASAPWLPTRFSEEDVKETQRK 640

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQ 408
            L+  + N+ S  V  +  D D   P      +S    D+ ILS  + +++ + E++ N 
Sbjct: 641 FLST-LWNVYSFYV--LYADLDNFNPLEYKEFKSEHVMDKWILSKLNSLIKNVEEHLDNY 697

Query: 409 LIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQA 464
            I +A  ++   V E+  ++   +  + W  + T+    A T LY  +  + ++A     
Sbjct: 698 RITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGAYTTLYRVLTTVIKVA---AP 754

Query: 465 FVPKLANKIFDILFV 479
           FVP +  +++  L V
Sbjct: 755 FVPFVTEEMYQNLVV 769



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N +PH+GH    ++ D++ R+  + G  VL   G D HG
Sbjct: 51 NGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHG 89


>gi|170289858|ref|YP_001736674.1| leucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173938|gb|ACB06991.1| leucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 953

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 31/62 (50%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          K  +K Y++ A  YPN+  HIGH     + D  ARF R+ G +VLF       G  I   
Sbjct: 33 KSLKKFYLTVAYPYPNSPQHIGHGRTYGLTDAYARFKRMQGYNVLFPMAFHYTGTPILAM 92

Query: 62 AQ 63
          A+
Sbjct: 93 AK 94



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 47/237 (19%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    G+D++  H  ++  F   A  P    P+++  +G +  +G+K+SKSLGN+I
Sbjct: 584 WYPLDSRHSGRDLVWNHLTFF-IFNHVAIFPRDLWPRQIVVNGSVTMEGKKMSKSLGNII 642

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
                +E  G D +R  ++       D             AD +  +        S  LK
Sbjct: 643 PIRRAVELFGADPIRLSVMGSAELSSD-------------ADFSPIVA-------SSTLK 682

Query: 372 DYDGMIPTPGAFTESDESIL----------SVCSRVLQEIRENMQNQLIHRALAQ-VISL 420
               ++     F+  DE ++          ++    ++EI + M+      A+   V  L
Sbjct: 683 RLFRILDLASKFSSFDEELIVEDLWDMWLVTMLKLHVKEITDAMEECRAREAIHHSVYLL 742

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++EV+ Y +A+      + N      +L V        A LL  F P +A +I++ +
Sbjct: 743 LNEVEEYLEAK-----GEANGRLMKYILNV-------WARLLAPFAPHVAEEIWETI 787


>gi|78776979|ref|YP_393294.1| isoleucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123550505|sp|Q30SH2|SYI_SULDN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78497519|gb|ABB44059.1| Isoleucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 919

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           I+ VW D+ + + +     +   G     + ADL+V G D  R    +  +  LSA +  
Sbjct: 537 ILDVWFDSGSTWYSVLKSRNYDAGE----FQADLYVEGSDQHR--GWFQSSMFLSAAVEH 590

Query: 287 P---KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               K V +HGF +  KGEK+SKS GNV+ P  V++E G + LR ++ 
Sbjct: 591 KAPYKGVLTHGFTVDEKGEKMSKSKGNVVAPETVLKEYGSEILRLWVA 638



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ D++ + +   G  V FT G D HG  I +  +
Sbjct: 58  YANGHTHIGHALNKILKDIIVKHNYFSGKSVRFTPGWDCHGLPIEQQVE 106


>gi|51473795|ref|YP_067552.1| isoleucyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826297|sp|Q68WC2|SYI_RICTY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51460107|gb|AAU04070.1| Isoleucine translase [Rickettsia typhi str. Wilmington]
          Length = 1086

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 48/214 (22%)

Query: 290 VFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG-- 345
              HG IL   G+K+SK L N  DP+E+ +  G DALR   L   +  G++   DKDG  
Sbjct: 611 CICHGVILDATGQKLSKRLNNYADPLELFDRYGSDALRVTMLSSNVVKGQELLIDKDGKM 670

Query: 346 ------------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                                  NAD   G  N  S++V                    D
Sbjct: 671 IFDTLRLFIKPIWNAYHFFTIYANADALKGTLNFTSQNV-------------------LD 711

Query: 388 ESILSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDR 443
             ILS     + +I E++ N   Q  + A+++   +++         + W+ +K T+   
Sbjct: 712 IYILSKLKIAVNKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKKEKDTDKQN 771

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           A   LY  +E    + I + A VP ++  I+  L
Sbjct: 772 AYNTLYSCLET---MTIAMSALVPMISEAIYQGL 802


>gi|31544637|ref|NP_853215.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|48428524|sp|Q7NB47|SYL_MYCGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|31541482|gb|AAP56783.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930701|gb|ADC30640.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 805

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 16/186 (8%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+ +  H+GH    +  DV++R+    G +VL   G D  G    +
Sbjct: 27  KNKPKYYILDMFPYPSGKGLHVGHVKAYMATDVISRWKNALGFNVLHPIGWDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGD 118
            A         F  +N  NFR     L  +YD  +   TT K +    + ++KK+ +   
Sbjct: 87  YAIQTNNHPAKFTQENINNFRTQLKRLGFNYDYRLEVDTTNKNYFKWTQWIFKKLYEHDL 146

Query: 119 IYKG------CYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSA 171
            Y+       C      L +E    D+   K ++ G Y   +    QW+       +++A
Sbjct: 147 AYQADIEVNWCEQLGTVLANEEVLTDENGNKISERGSYPVIKKKMRQWV------LKITA 200

Query: 172 YQDKLL 177
           + D+L+
Sbjct: 201 FADQLI 206



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 255 FWPADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK-GEKISK 305
           F P DL+V G++    H +Y   W  FL     +S+  P   ++ + G IL +   K+SK
Sbjct: 528 FMPVDLYVGGQEHAVLHLLYARFWYKFLHHIKIVSSTEPF-SQLINQGMILGEDNTKMSK 586

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLV 330
           S GN+I+P +++   G D +R +++
Sbjct: 587 SKGNIINPDDLVLSHGADTIRTYVM 611


>gi|304439987|ref|ZP_07399880.1| leucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371479|gb|EFM25092.1| leucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 802

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ Q  H+GHA      DV++R  RL+G  VLF  G D  G      A
Sbjct: 31  KKKFYALVEFPYPSGQGLHVGHARPYTALDVVSRKRRLEGEQVLFPMGWDAFGLPTENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K     N +NF+     +  S+  D  I TT+  ++   + ++ ++   G  Y
Sbjct: 91  IKNKIHPKKVTLDNIKNFKRQLKSIGFSFDWDREIDTTDPEYYKWTQWIFLQLFKHGLAY 150

Query: 121 K 121
           K
Sbjct: 151 K 151



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 29/179 (16%)

Query: 255 FWPADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISK 305
           F   D +  G +    H +Y   W  FL    + +P     KK  SHG IL    EK+SK
Sbjct: 526 FLQVDWYNGGMEHTTLHLLYSRFWHRFLYDIGV-VPTKEPYKKRTSHGMILGSNSEKMSK 584

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-KRVNADLANGIGNLVSR 364
           S GNVI+P +++ E G D LR + +      K   +  +G+K  R   D   G+  L++ 
Sbjct: 585 SRGNVINPDDIVNEYGADTLRTYEMFMGDFEKAAPWSTNGVKGARRFLDRVYGLAELING 644

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
                             ++++ ES++    + ++++ ++ +    + A+A ++SLV+E
Sbjct: 645 E---------------SGYSKNLESLI---HKTIKKVTDDYETLKFNTAIAALMSLVNE 685


>gi|294675160|ref|YP_003575776.1| leucine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474189|gb|ADE83578.1| leucine--tRNA ligase [Prevotella ruminicola 23]
          Length = 940

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D +G    +
Sbjct: 28  KNKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRQQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +    +N   +R   D +  S+D
Sbjct: 88  YAIQTGQHPEKTTFENINRYRSQLDKIGFSFD 119


>gi|119774061|ref|YP_926801.1| isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229766|sp|A1S425|SYI_SHEAM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119766561|gb|ABL99131.1| Isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 940

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + T         G        DL++ G D  R  F +    +  + A  P  
Sbjct: 536 VWYDSGSTFETVVAARPEFQGHGV-----DLYLEGSDQHRGWFMSSLMLSTAMHAKAPY- 589

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  KG K+SKS+GNVI P EV  ++G D LR ++ 
Sbjct: 590 KQVLTHGFTVDGKGRKMSKSIGNVIAPQEVTNKLGADILRLWVA 633



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGH+   I+ D++ +   L G D  +  G D HG        QK+ K  Q   
Sbjct: 59  YANGSIHIGHSVNKILKDIIIKSKTLAGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK-- 116

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++   F ++  R +   A  +D   +DFIR
Sbjct: 117 ISAAEFREE-CRKY--AAAQVDGQREDFIR 143


>gi|298249716|ref|ZP_06973520.1| leucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297547720|gb|EFH81587.1| leucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 833

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 16/102 (15%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPK 288
           Y+ + D ++A       K+ P D+++ G +    H +Y            LL  N P  K
Sbjct: 536 YISSDDATQAWDPVLARKWLPVDMYIGGAEHSVLHLMYARFITKALHDLSLLEINEPF-K 594

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +  ++G I   G KISKS GN+I+P + IE  G D  R +L+
Sbjct: 595 RFRANGMITRDGAKISKSRGNIINPDDYIERFGADVFRVYLL 636



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 15  YPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           YP+A+  H+G+ Y  +  D+  R+  + G DV    G D  G      A   GV  ++  
Sbjct: 61  YPSAEGLHVGNMYSYVGTDIQGRYKAMQGYDVFEPIGFDAFGIHSENFAIKQGVHPRILT 120

Query: 74  DQNSRNFRD-----MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
             N  +FR+     + +  D S++  + TT   ++   + ++ ++   G   +   S  +
Sbjct: 121 KHNIEHFREQQLKRIGNRFDWSHE--VDTTAPEYYRWTQWIFLQLFKAGLAERKSASVNW 178

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             +D+    D++V  G   +  +      +W+E+  +F + + Y  +LL
Sbjct: 179 CPKDKTVLADEQVINGHCERCDSVVER--RWLEQ--WFLKTTKYAQRLL 223


>gi|269215567|ref|ZP_06159421.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131054|gb|EEZ62129.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 952

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW ++  +++   G L +        WPADL++ G D  R  F +          + 
Sbjct: 543 ILDVWWESGVSHV---GVLKHRADEDRLHWPADLYLEGSDQHRGWFQSSLLCGVGAYGSA 599

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V   GF + + GEK+SKS GN IDP EV +  G D LR ++
Sbjct: 600 PY-KAVMCCGFTVDEHGEKMSKSKGNGIDPKEVTDTYGADVLRLWV 644



 Score = 37.4 bits (85), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 47  RDGEPFVLHDGPPYANGPIHIGHAFNKILKDFVVKSHAQRGYFTPYVPGWDCHGQPIEHE 106

Query: 62  AQNAGVTTKV 71
            +    T K+
Sbjct: 107 VEKKLGTEKM 116


>gi|147907242|ref|NP_001088439.1| valyl-tRNA synthetase [Xenopus laevis]
 gi|54311439|gb|AAH84762.1| LOC495303 protein [Xenopus laevis]
          Length = 1243

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 255 FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVI 311
           F+P  L   G DIL F    +      L+  LP  K+V+ H  +    G K+SKSLGNVI
Sbjct: 792 FYPGTLLETGHDILFFWVARMVMLGLTLTGKLPF-KEVYLHAVVRDAHGRKMSKSLGNVI 850

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI  + ++ L   L+       +    KDG K     D  NGI    + ++   L 
Sbjct: 851 DPLDVINGITLEGLHKQLLESNLDPAELERAKDGQK----YDYPNGIPECGTDALRFALC 906

Query: 372 DY 373
            Y
Sbjct: 907 AY 908


>gi|71281480|ref|YP_267488.1| valyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|90103531|sp|Q488M6|SYV_COLP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71147220|gb|AAZ27693.1| valyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 973

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 130/347 (37%), Gaps = 90/347 (25%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+  + +  K  F P D+ V G DI+ F    W A ++      
Sbjct: 487 VLDTWFSSALWTFSTLGWPKDTEDLKT-FHPTDVLVTGFDIIFF----WVARMIMMTMHF 541

Query: 281 ------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV------------- 320
                  A +P  KK++  G I    G+K+SKS GNV+DP+++I+ +             
Sbjct: 542 NKDENGKAQIPF-KKIYMTGLIRDENGDKMSKSKGNVVDPLDMIDGISLEDLLQKRTGNM 600

Query: 321 ------------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L      G+D  +D   L+   N    N
Sbjct: 601 MQPKLAKKIEKLTRKEYPEGIEAHGTDALRFTLTSVATTGRDISWDMKRLEGYRN--FTN 658

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQN--- 407
            + N  SR V M  +++D    +P         + +D  I+    + ++ + E       
Sbjct: 659 KLWN-ASRYVMMNTEEFDCGQSSPEGKAGDMELSLADRWIIGQFEQTVKTVHEAFDTYRF 717

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            L  +AL +  +     D Y +  KP  L K N  +     +  V V+  L  L+   +P
Sbjct: 718 DLASQALYE-FTWNQFCDWYLELTKP-VLFKENEAQQRGTRHTLVNVLEALLRLMHPIMP 775

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI----FPRF 510
            +   I+                QR++P     K  D I    FP+F
Sbjct: 776 FITETIW----------------QRVQPLSDFSKNGDSIMVQAFPQF 806



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 13/68 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S AI  PN     H+GHA++  I D L R+ R+ G + L+ TG D           +AG+
Sbjct: 51  SIAIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQTGCD-----------HAGI 99

Query: 68  TTKVFVDQ 75
            T++ V++
Sbjct: 100 ATQMVVER 107


>gi|329946452|ref|ZP_08293995.1| Anticodon-binding domain protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328527274|gb|EGF54276.1| Anticodon-binding domain protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 916

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 14/148 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +  +    +G+L + D    + +P DL   G+DI+R   F ++   A L  A 
Sbjct: 528 IMDTWATSSLSPQLASGWLTDED-LFGRVYPMDLRPQGQDIIRTWLFTSVV-RADLEFAA 585

Query: 284 LPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           LP      S G+IL   HK  K+SKS GNV+ P+ ++E+ G DA+RY+       G D  
Sbjct: 586 LPWRNAGLS-GWILDSDHK--KMSKSKGNVVTPMGLLEQYGSDAVRYW-ASSARLGLDAA 641

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +++  +K  +   LA  + N    ++SM
Sbjct: 642 FEETQIK--IGRRLAIKVLNASKFALSM 667



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          H+GH +     D +ARF R+ G  V +  G D++G    +  QN
Sbjct: 50 HVGHVFSYTHTDTVARFQRMRGKAVFYPMGWDDNGLPTERRVQN 93


>gi|294856149|gb|ADF45012.1| methionyl-tRNA synthetase [Escherichia sp. TW09231]
 gi|294856153|gb|ADF45014.1| methionyl-tRNA synthetase [Escherichia sp. TW09254]
 gi|294856155|gb|ADF45015.1| methionyl-tRNA synthetase [Escherichia sp. TW09266]
 gi|294856161|gb|ADF45018.1| methionyl-tRNA synthetase [Escherichia sp. TW14182]
 gi|294856163|gb|ADF45019.1| methionyl-tRNA synthetase [Escherichia albertii TW11588]
 gi|294856165|gb|ADF45020.1| methionyl-tRNA synthetase [Escherichia sp. H605]
 gi|294856167|gb|ADF45021.1| methionyl-tRNA synthetase [Escherichia sp. B49]
 gi|294856205|gb|ADF45040.1| methionyl-tRNA synthetase [Escherichia albertii]
 gi|294856207|gb|ADF45041.1| methionyl-tRNA synthetase [Escherichia albertii]
 gi|294856209|gb|ADF45042.1| methionyl-tRNA synthetase [Escherichia albertii]
 gi|294856211|gb|ADF45043.1| methionyl-tRNA synthetase [Escherichia albertii]
 gi|294856213|gb|ADF45044.1| methionyl-tRNA synthetase [Escherichia albertii]
 gi|294856215|gb|ADF45045.1| methionyl-tRNA synthetase [Escherichia albertii]
 gi|294856217|gb|ADF45046.1| methionyl-tRNA synthetase [Escherichia albertii]
          Length = 175

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
           ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +      +IS
Sbjct: 1   ADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNIS 60

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           YD++  T  + +     +++ ++ + G I
Sbjct: 61  YDNYHSTHSEENRQLSELIYTRLKENGFI 89


>gi|257867508|ref|ZP_05647161.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257801564|gb|EEV30494.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 929

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  ++   
Sbjct: 520 IMDVWFDSGSSHEAV--LRQRPELT----FPADMYLEGSDQYRGWFNSSITTSVAINEVA 573

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN I P +VI ++G D LR ++
Sbjct: 574 PY-KAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV 618



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGH+   I  D++ R   + G    +  G D HG  I +   N G+  K    
Sbjct: 56  YANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGIKRKEMSL 115

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +    D  +  +I  T        R+   K+++KG 
Sbjct: 116 AEYRKKCEEYALTQVDTQRADFKRLGVSGDWEH-PYITLTPDYEAAEIRVF-GKMAEKGY 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 174 IYKGLKPIYWSPSSESSLAEAEI 196


>gi|239948481|ref|ZP_04700234.1| valyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922757|gb|EER22781.1| valyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 495

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 17/267 (6%)

Query: 227 IMYVW-IDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W   +++  L+T G  D+   +K    K +P DL     +I+R  A Y    A L 
Sbjct: 138 VMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTILKAHLH 197

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 198 QNTLPWENIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANS-KLGADTA 256

Query: 341 YDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCS 395
           Y +D +K  KR+   L N     VS     +                  E D+ I++   
Sbjct: 257 YSEDVMKNGKRLVNKLWNA-AKFVSIHFDKLKGKDKKAKLLDVKEKITNEFDQWIINKLV 315

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQK--PWELKKTNPDRASTVLYVT 451
            +++     +QN     A+         V  D Y +  K   ++ +  NP    + +   
Sbjct: 316 ELVKLATNELQNYEYANAMHLTEKFFWAVFCDNYLEISKTRSYDEENKNPQEQYSSILTL 375

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
             V++ L  L   F+P +  +++ IL+
Sbjct: 376 YHVMQTLLKLFAPFMPHITEELYQILY 402


>gi|308232623|ref|ZP_07416669.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu001]
 gi|308369289|ref|ZP_07417199.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu002]
 gi|308370299|ref|ZP_07420974.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu003]
 gi|308371567|ref|ZP_07425340.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu004]
 gi|308372793|ref|ZP_07429878.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu005]
 gi|308373871|ref|ZP_07433941.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu006]
 gi|308378529|ref|ZP_07482881.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu009]
 gi|308380880|ref|ZP_07491331.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu011]
 gi|308394115|ref|ZP_07491613.2| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu012]
 gi|308213475|gb|EFO72874.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu001]
 gi|308328193|gb|EFP17044.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu002]
 gi|308332498|gb|EFP21349.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu003]
 gi|308336310|gb|EFP25161.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu004]
 gi|308339913|gb|EFP28764.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu005]
 gi|308343929|gb|EFP32780.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu006]
 gi|308352337|gb|EFP41188.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu009]
 gi|308360227|gb|EFP49078.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu011]
 gi|308367753|gb|EFP56604.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu012]
          Length = 958

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 58  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAV 117

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L   +D
Sbjct: 118 QTGTHPRTRTEANVVNFRRQLGRLGFGHD 146


>gi|328945573|gb|EGG39724.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 937

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTSDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|328777957|ref|XP_001123204.2| PREDICTED: valyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 801

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 65/356 (18%)

Query: 182 SHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           S P + + IE + E +I+  ++  K +  ++   D  IK+  D   ++  W  +      
Sbjct: 381 SIPAYYITIEGKTEWIIARTENDAKIIVQNKYGSD--IKLYKDED-VLDTWFSSAILPFA 437

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGF 295
             G+ +  +  K K++P  L   G+DIL F    W A ++   L L       +V  HG 
Sbjct: 438 IMGWPEKTEDLK-KYYPLTLMETGRDILFF----WVARMVMLGLELTNCLPFDEVLLHGL 492

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDAL---RYFLVREIACGKDGF---YDKDGLK- 347
           +    G+K+SK+LGN++ P  +I  + ++      YF      CG D          +K 
Sbjct: 493 LCDAYGKKMSKTLGNIVSPENIINGISLNVFLMKLYFPNGIPECGADALRMTLSSHNIKN 552

Query: 348 KRVNADLANGIGN------LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + +N D+     N      +   S  ++L   + +   P   T  D+ ILS  S ++  I
Sbjct: 553 QHINFDIMECQTNKYFLNKIWQASKYILLMTNEKIYQKPINITIIDQWILSRLSLMINTI 612

Query: 402 RENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
                N  I R   +VI+ + +       D Y +  K W  K  N +   +  YV   + 
Sbjct: 613 ----NNAFIKRDFHKVIASMKQFLYYEFCDFYLEGSK-WGFKSENINTHISHTYV---LR 664

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + L + L+A  P +        ++ D+                L+K    IFP FL
Sbjct: 665 KCLEVFLRASAPIIP-------YLCDD----------------LYKRLSNIFPEFL 697



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA  + I D+LAR++R+ G  V++  G D           +AG+ T+  V++
Sbjct: 13 HLGHALTVTIQDILARWYRMKGHSVVWIPGFD-----------HAGIATQTMVEK 56


>gi|323144739|ref|ZP_08079316.1| valine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415490|gb|EFY06247.1| valine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 956

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 123/330 (37%), Gaps = 91/330 (27%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R S      L   E      +P +  N   S+++  L+D  +SR+ + 
Sbjct: 375 PIEPMLTDQWYVRASVLGKPALEAVEDGRIKFVPAQYTNMYYSWMRD-LQDWCISRQLW- 432

Query: 216 WGIKIP-------------------------------DDPQYIMYVWIDALTNYLTTTGY 244
           WG +IP                                DP  ++  W  +     +T G+
Sbjct: 433 WGHRIPAWYDEKGNIYVARSEEEVRSKYNLDQNIVLTQDPD-VLDTWFSSALWTFSTLGW 491

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSH 293
            DN    +  F P  + V G DI+ F    W A ++   +   K            V+  
Sbjct: 492 PDNTKELET-FHPTSVLVTGFDIIFF----WVARMIMMTMHFMKNPDGTPQVPFHTVYVT 546

Query: 294 GFIL-HKGEKISKSLGNVIDPIEVIEEV-------------------------------- 320
           G I   +G+K+SKS GNV+DP+++I+ +                                
Sbjct: 547 GLIRDEEGQKMSKSKGNVLDPLDMIDGIDIDSLVKKRTANMMQPQIAEKIAKRTRKQFPD 606

Query: 321 -----GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
                G DALR+ L    + G+D  +D   L+   N    N I N  SR V M +     
Sbjct: 607 GISAHGTDALRFTLCALASNGRDINWDMKRLEGYRN--FCNKIWN-ASRFVLMNIDGMSL 663

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENM 405
           + P     + +D  I S  +  +++IRE +
Sbjct: 664 VKPQASDLSLADRFIYSKLATAIKDIREAL 693



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 39/143 (27%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------------ 55
           S A+  PN     H+GHA++  I D L RFHR++G + L+  GTD  G            
Sbjct: 38  SIALPPPNVTGSLHMGHAFQQTIMDSLIRFHRMNGDNTLWQCGTDHAGIATQMVVERKLA 97

Query: 56  ----------------QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
                           ++I K  Q +G T        +R  R + D +D S + F  T +
Sbjct: 98  KEENLTRHDLGREKFIERIWKWRQESGGTI-------TRQMRRLGDSVDWSRERF--TMD 148

Query: 100 KRHHDTCRILWKKISDKGDIYKG 122
           +   +  + ++ ++ D+  IY+G
Sbjct: 149 EGLSNAVKEVFVRLYDEDLIYRG 171


>gi|315078744|gb|EFT50768.1| isoleucine--tRNA ligase [Propionibacterium acnes HL053PA2]
          Length = 1122

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|301120103|ref|XP_002907779.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262106291|gb|EEY64343.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1052

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 13/98 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W+ A        G+ +  D  +  F+P DL   G DIL     +W A +      L
Sbjct: 573 VLDTWVSAGLFPFAVFGWPNKTDDFE-NFFPTDLLETGYDIL----FFWVARMVFMGQKL 627

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVI 317
           +  LP  K ++ H  +  K G K+SKSLGNV+DP+E+I
Sbjct: 628 TGKLPF-KTIYLHSMVRDKYGRKMSKSLGNVVDPLEII 664


>gi|289581377|ref|YP_003479843.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530930|gb|ADD05281.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 904

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 41/267 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--LLSANLPLPKK-----VFSHGFILHKG 300
           D ++A  W P D +V G +    H +Y   F  +L+ +  L  +     + + G +   G
Sbjct: 526 DLARANDWMPVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFTNLLAQGMVQLDG 585

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK---------KRVN 351
           EK+SKS GN + P  ++EE G D  R F+++     +D  + ++G++         K + 
Sbjct: 586 EKMSKSKGNTVSPQRIVEEYGADTARLFMMQAAQPERDFDWSEEGVRSTNAFLTRLKEMV 645

Query: 352 ADLAN----GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            D A     G  +  +R V+    + D  I   G   E D+   +   R  Q++ + ++ 
Sbjct: 646 EDFATEQPAGEDDATARYVA---NEIDATIAIAGG--EYDDLTFNRALRETQDLVQTLRQ 700

Query: 408 ---------QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV-----TVE 453
                    +   R L+ V+ L++ V  +  A++ +    T  D   T   V     T  
Sbjct: 701 YAAYTEPHAETYERGLSAVVRLLAPVAPHL-AEELYAELDTGEDGDETEFVVDAPWPTAT 759

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V R+     +  V      + DI+ VA
Sbjct: 760 VDREYVTKRRQLVENTREDVRDIIDVA 786



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 16/178 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ ++ G DVL   G D  G     AA++   
Sbjct: 51  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRQMCGDDVLHPMGWDAFGLPAENAAKDRDT 110

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG--- 122
             + +        RD    +   Y  D  I T    ++   + L+ +   +  + +    
Sbjct: 111 NPRDWTFDCIDTMRDQMRAMGFGYDWDREIATCTPEYYQWNQWLFSRFHQEDLVERRDAE 170

Query: 123 ---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              C      L DE    + E+    D         PV+  E E +F +++ Y D+LL
Sbjct: 171 VNWCPECETVLADEQVEGEAELCWRCD--------TPVEQRELEQWFLKITEYADELL 220


>gi|171464053|ref|YP_001798166.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193591|gb|ACB44552.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 953

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 12/172 (6%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+      +L    P  K + +HGF +  +G K+SKS+GNVI P 
Sbjct: 581 ADLYLEGSDQHRGWFHSSLLTGAMLDGKPPY-KALLTHGFTVDGQGRKMSKSVGNVIAPQ 639

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V +++G + +R ++      G+    D+  + KRV       I N + R +   L D+D
Sbjct: 640 QVADKLGAEIIRLWVASTDYSGEMTISDE--ILKRVTESYRR-IRNTL-RFLLANLSDFD 695

Query: 375 G---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
                IP    + E D    ++ + + +++  + +      A+A+++S  SE
Sbjct: 696 PSKHSIPA-DQWLEIDRYAAALANTLQKDVEAHYKAYEFQPAVARMLSFCSE 746



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 16/131 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------- 58
           K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I       
Sbjct: 52  KFILHDGPPYANGDIHIGHAVNKILKDMIVKSRWLMGFDSAYVPGWDCHGMPIEIQIEKE 111

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                  A+    A     V V++  ++F  +  VL    + ++    +   D  R L  
Sbjct: 112 FGKNLPTAEVQSKARAYAHVQVEKQKKDFERLG-VLGDWNNPYLTMNFRNEADEIRAL-G 169

Query: 112 KISDKGDIYKG 122
           KI +KG I++G
Sbjct: 170 KIWEKGYIFRG 180


>gi|328472070|gb|EGF42947.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 942

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHFSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSVAMKGVAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|319757613|gb|ADV69555.1| isoleucyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 929

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 47/273 (17%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNAREN------LAYPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K + S GF+L   G K+SKSLGN I P +V ++ G + LR + V  +    D     
Sbjct: 578 PY-KAILSQGFVLDGNGMKMSKSLGNTILPSDVEKQFGAEILRLW-VTSVDTSND----- 630

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCS 395
                RV+ D+   +      +  ++  ++ +     P   A         D+ +L   +
Sbjct: 631 ----VRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLLVKFN 686

Query: 396 RVLQEIRENMQN---QLIHRALAQVISL--------VSEVDRYFDAQKPWELKKTNPDRA 444
           +++ +IRE   N     I++++   ++L         ++   Y D  K    ++      
Sbjct: 687 KLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQMQ---- 742

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            TV Y   +++ ++  LL  F+P  A +I+  L
Sbjct: 743 -TVFY---DILVKITKLLTPFLPHTAEEIWSYL 771



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-V 73
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K   +
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     RD A   +D   DDF R            T  + ++  +I ++  ++DKG IY
Sbjct: 118 VEYLEMCRDYAFSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQIRVFGAMADKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|294856135|gb|ADF45005.1| methionyl-tRNA synthetase [Escherichia sp. E807]
 gi|294856139|gb|ADF45007.1| methionyl-tRNA synthetase [Escherichia sp. M863]
 gi|294856145|gb|ADF45010.1| methionyl-tRNA synthetase [Escherichia sp. TW11966]
 gi|294856151|gb|ADF45013.1| methionyl-tRNA synthetase [Escherichia sp. TW09276]
 gi|294856157|gb|ADF45016.1| methionyl-tRNA synthetase [Escherichia sp. TA04]
 gi|294856159|gb|ADF45017.1| methionyl-tRNA synthetase [Escherichia sp. B685]
 gi|294856223|gb|ADF45049.1| methionyl-tRNA synthetase [Escherichia fergusonii]
 gi|294856225|gb|ADF45050.1| methionyl-tRNA synthetase [Escherichia fergusonii]
 gi|294856227|gb|ADF45051.1| methionyl-tRNA synthetase [Escherichia fergusonii]
          Length = 175

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
           ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +      +IS
Sbjct: 1   ADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNIS 60

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           YD++  T  + +     +++ ++ + G I
Sbjct: 61  YDNYHSTHSEENRQLSELIYTRLKENGFI 89


>gi|328865832|gb|EGG14218.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1063

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 35/238 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P DL V G D+++ H      F L  +  L      P+ + ++GF+L  GEK+SKS G
Sbjct: 667 WYPLDLRVSGIDLVQNHL----TFFLYNHATLFPEHHQPRGIRANGFVLLNGEKMSKSSG 722

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +   + +E+   DA R  L    A   DG  D + L K   + L   +   V+    M
Sbjct: 723 NFLTLFDAVEKYSADATRVAL----ADAGDGVEDANFLDKTALSALFK-LHTQVTWVEEM 777

Query: 369 ILKDYDGMIPTPGAFTESDESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +L   D M    GA T + + +  S  +R +++  +  +      AL  V         +
Sbjct: 778 LLAQ-DKMY--TGAPTRAQDIVFASEINRAIKQAEDAYEKSQFREALRIV---------F 825

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQL----AILLQAFVPKLANKIFDILFVAD 481
           FD     +  K+  D   +V  ++ E+I +     AIL+    P  + KIF+++   D
Sbjct: 826 FDFLASRDYYKSVLD---SVENMSKELINRFIEVQAILMYPIAPHFSQKIFNLIGKGD 880



 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 54/148 (36%), Gaps = 11/148 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K   S    Y N + HIGH + +  A+ + +F RL G  VLF             A 
Sbjct: 38  EEPKYMASFPYPYMNGRLHIGHVFTVTKAEFMCQFQRLKGKRVLFPF-----------AF 86

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  KV  D+  +   +         D+  +  EK       + +K    K     G
Sbjct: 87  HCTGMPIKVCADKLKKEMEEFGTPPVFPIDEPEKVVEKVAIKEDPLQFKSNKSKVKAKTG 146

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             +  + +       D+E+ K AD  Y+
Sbjct: 147 GIARQWKIMQSLGITDEEIPKFADTTYW 174


>gi|313826432|gb|EFS64146.1| isoleucine--tRNA ligase [Propionibacterium acnes HL063PA1]
          Length = 1122

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|257873837|ref|ZP_05653490.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257808001|gb|EEV36823.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 931

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++         P+ +    +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAV--LRQRPELT----FPADMYLEGSDQYRGWFNSSITTSVAINEVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           P  K V S GF L  +G K+SKSLGN I P +VI ++G D LR ++
Sbjct: 576 PY-KAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV 620



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   HIGH+   I  D++ R   + G    +  G D HG  I +   N G+  K    
Sbjct: 58  YANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGIKRKEMSL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD    +F+ +    D  +  +I  T        R+   K+++KG 
Sbjct: 118 AEYRKKCEEYALTQVDTQRADFKRLGVSGDWEH-PYITLTPDYEAAEIRVF-GKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|260587872|ref|ZP_05853785.1| leucine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083873|ref|ZP_08332982.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260542137|gb|EEX22706.1| leucine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330403298|gb|EGG82858.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 804

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 19/185 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +RF  + G  ++   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRFKMMQGYYLIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNF-RDMADVLDI-SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  NF R + D+  I  +D  + TT+   +   + ++ K+  +G  
Sbjct: 89  AIKMGVHPSKSTAENVENFKRQLNDISAIYDWDREVNTTDPEFYKWTQWIFVKMFKEGLA 148

Query: 120 YKG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           Y+       C S    L +E   N      GA+      + N  QWM       R++ Y 
Sbjct: 149 YEKEFPINWCPSCKTGLANEEVVNGKCERCGAE----VTKKNLRQWM------LRITKYA 198

Query: 174 DKLLS 178
           D+LL+
Sbjct: 199 DRLLN 203



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-GEKIS 304
           K+ P D+++ G +    H +Y   +  FL    +     P  +K+F+ G I  K G K+S
Sbjct: 524 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGVVDFDEPF-QKLFNQGMITGKNGIKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYF 328
           KS GNV+ P +++ + G DALR +
Sbjct: 583 KSKGNVVSPDDLVRDYGCDALRLY 606


>gi|221133242|ref|XP_002171102.1| PREDICTED: similar to valyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 387

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 11/122 (9%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP- 287
            W  +    +   G + +P+    K++ P +  V G DIL F    W A ++ A      
Sbjct: 231 TWFSSWLWPMAVFGGIMDPENEDFKYYYPTNDLVTGPDILFF----WVARMIIAGYEYAD 286

Query: 288 ----KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
               K V+  G +   +G K+SKSLGN  +P+ +IE+ G D +R  L+   + G D  +D
Sbjct: 287 AKPFKNVYLTGLVRDSQGRKMSKSLGNSPEPLGLIEKFGADGVRVGLLLSASAGNDILFD 346

Query: 343 KD 344
           ++
Sbjct: 347 EE 348


>gi|167915171|ref|ZP_02502262.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 939

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARAGTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|313811234|gb|EFS48948.1| isoleucine--tRNA ligase [Propionibacterium acnes HL083PA1]
 gi|313834270|gb|EFS71984.1| isoleucine--tRNA ligase [Propionibacterium acnes HL056PA1]
 gi|314974365|gb|EFT18460.1| isoleucine--tRNA ligase [Propionibacterium acnes HL053PA1]
 gi|314985360|gb|EFT29452.1| isoleucine--tRNA ligase [Propionibacterium acnes HL005PA1]
 gi|315097200|gb|EFT69176.1| isoleucine--tRNA ligase [Propionibacterium acnes HL038PA1]
 gi|327331284|gb|EGE73023.1| isoleucine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327447337|gb|EGE93991.1| isoleucine--tRNA ligase [Propionibacterium acnes HL043PA1]
 gi|327450474|gb|EGE97128.1| isoleucine--tRNA ligase [Propionibacterium acnes HL043PA2]
 gi|328761192|gb|EGF74734.1| isoleucine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|313772756|gb|EFS38722.1| isoleucine--tRNA ligase [Propionibacterium acnes HL074PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|261749535|ref|YP_003257221.1| isoleucyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497628|gb|ACX84078.1| isoleucyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 1144

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  + +L  N    K V S G +L  KG K+SKS GN I
Sbjct: 638 FFPADFIAEGIDQTRGWFFTLHVISSIL-FNSKAYKNVISTGLVLDEKGHKMSKSKGNAI 696

Query: 312 DPIEVIEEVGVDALRYFLV 330
           +P  +IE+ G DA+R+++V
Sbjct: 697 NPFNLIEDYGPDAIRWYIV 715


>gi|27884149|emb|CAD61268.1| novel protein similar to human mitochondrial isoleucine tRNA
           synthetase [Danio rerio]
          Length = 982

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K +++  +     Y N  PH+GHA   I+ D+  RF  L G  V +  G D HG  I  K
Sbjct: 75  KAKKEYCLHDGPPYANGDPHVGHALNKILKDIRNRFEVLRGRQVHYVPGWDCHGLPIELK 134

Query: 61  AAQNAGVT--TKVFVDQNSRNFRDMA 84
           A  + G    T V + Q +R F + A
Sbjct: 135 ALGDLGTNELTPVQIRQKAREFAEKA 160



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGF-ILHKGEKISKSLGNVIDPI 314
           AD +V GKD +   F +    +  +    P  K +  HGF +  KGEK+SKS+GNV+DP 
Sbjct: 586 ADSYVEGKDQIGGWFQSSLLTSVAVRNKAPY-KALVVHGFAVSEKGEKMSKSIGNVVDPD 644

Query: 315 EVIE---------EVGVDALRYFLVR-----EIACGKDGF-YDKDGLKKRVNADLANGIG 359
            VI            G D LR+++       E+  G +     KD + K  N  L   +G
Sbjct: 645 VVINGGKDSSVSPPYGADVLRWWVAESNVFSEVQIGPNALNAAKDSINKLRNT-LKFLLG 703

Query: 360 NL 361
           NL
Sbjct: 704 NL 705


>gi|51598989|ref|YP_073177.1| valyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81825616|sp|Q660D6|SYV_BORGA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51573560|gb|AAU07585.1| valyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 875

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 18/228 (7%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-FSHGFIL-----HKGEKISKSLG 308
           ++P    +   DI+ F    W A ++ A L    +  F   +I       +G+K+SKSLG
Sbjct: 475 YYPTKTLITAYDIIFF----WVARMVMAGLEFTGQTPFRDVYITPLLRDKQGKKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP+++I E G D+LR+ L      G+D   + D     + A  AN + N  S+ + +
Sbjct: 531 NGIDPLDIIHEYGSDSLRFTLSFLSVQGQD--LNIDAKDFMLGAKFANKVFN-ASKFILL 587

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            L++ +  I     F + D+ +L+  +  +  +  +  N   + A   V         D 
Sbjct: 588 NLENRE--IFNNLKFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDW 645

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+
Sbjct: 646 YIEISKI-DLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIY 692



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 45/162 (27%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA   ++ D+L R+ R+   + L+  GTD           +AG+ T+   ++N +N 
Sbjct: 52  HMGHALNFVLQDILVRYKRMKKHNTLWLFGTD-----------HAGIATQTVFERNLKNI 100

Query: 81  RDMADVLDISYDDFIRTTEK---RH-------------------------HDTCRI---L 109
               +  D   ++F++   K   +H                            C+    +
Sbjct: 101 GKSKN--DFEREEFVKEIFKLKDKHRGVIVNQIKKLGASYDHSRERFTLDESLCKAVNKV 158

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYY 150
           +K +  KG IY+G Y         +  +D+E+ YK  DG+ Y
Sbjct: 159 FKDLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEYKEVDGKLY 200


>gi|313832240|gb|EFS69954.1| isoleucine--tRNA ligase [Propionibacterium acnes HL007PA1]
 gi|314977002|gb|EFT21097.1| isoleucine--tRNA ligase [Propionibacterium acnes HL045PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|255003795|ref|NP_001157270.1| isoleucyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 983

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K +++  +     Y N  PH+GHA   I+ D+  RF  L G  V +  G D HG  I  K
Sbjct: 75  KAKKEYCLHDGPPYANGDPHVGHALNKILKDIRNRFEVLRGRQVHYVPGWDCHGLPIELK 134

Query: 61  AAQNAGVT--TKVFVDQNSRNFRDMA 84
           A  + G    T V + Q +R F + A
Sbjct: 135 ALGDLGTNELTPVQIRQKAREFAEKA 160



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGF-ILHKGEKISKSLGNVIDPI 314
           AD +V GKD +   F +    +  +    P  K +  HGF +  KGEK+SKS+GNV+DP 
Sbjct: 587 ADSYVEGKDQIGGWFQSSLLTSVAVRNKAPY-KALVVHGFAVSEKGEKMSKSIGNVVDPD 645

Query: 315 EVIE---------EVGVDALRYFLVR-----EIACGKDGF-YDKDGLKKRVNADLANGIG 359
            VI            G D LR+++       E+  G +     KD + K  N  L   +G
Sbjct: 646 VVINGGKDSSVSPPYGADVLRWWVAESNVFSEVQIGPNALNAAKDSINKLRNT-LKFLLG 704

Query: 360 NL 361
           NL
Sbjct: 705 NL 706


>gi|15838767|ref|NP_299455.1| leucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9107316|gb|AAF84975.1|AE004031_7 leucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 887

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 43  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I +     T +  ++   + ++ ++  KG  Y 
Sbjct: 103 KNKVAPAQWTYKNIERMRTQLKSLGYAIDWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 162

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 163 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 214



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 595 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 641

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 642 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 671


>gi|116193723|ref|XP_001222674.1| hypothetical protein CHGG_06579 [Chaetomium globosum CBS 148.51]
 gi|88182492|gb|EAQ89960.1| hypothetical protein CHGG_06579 [Chaetomium globosum CBS 148.51]
          Length = 1058

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP   +  W  +    ++  G+ +        F+P  +   G DIL F  I     
Sbjct: 563 RLEQDPD-CLDTWFSSGLWPMSILGWPNTESSDFKNFFPTSMLETGWDILFFWVIRMIML 621

Query: 279 LLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            L     +P  +V+ H  I   +G K+SKSLGNVIDP+++I  + ++AL   L+
Sbjct: 622 SLKLTGEVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIINGIELEALHAKLL 675


>gi|330996763|ref|ZP_08320635.1| valine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329572485|gb|EGG54136.1| valine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 882

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 490 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 544

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           GN  DP+++IE  G D +R  ++     G D  +D
Sbjct: 545 GNSPDPLDLIERYGADGVRMGMMLSAPAGNDILFD 579


>gi|322371470|ref|ZP_08046019.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549002|gb|EFW90667.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 893

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 35/60 (58%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + + G +L  G+K+SKS GNV+ P  ++EE G D  R F ++     KD  + ++G+K 
Sbjct: 570 NLVTQGMVLLDGDKMSKSKGNVVSPQRIVEEYGADTARLFTMQAAQPEKDFDWTEEGVKS 629



 Score = 43.5 bits (101), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 16/173 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y + Q H+GH     I D  AR+ R+DG +VL   G D  G     AA     
Sbjct: 37  YVLGMFPYTSGQLHMGHVRNYTITDAYARYKRMDGENVLHPMGWDSFGLPAENAAIERDT 96

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG--- 122
             + +        R+  + +   YD    I T +  ++   + L+ +  ++G + +    
Sbjct: 97  NPRDWTLSCIDTMREQMEGMGFGYDWEREITTCQPDYYRWNQWLFTRFREEGLVEREAAE 156

Query: 123 ---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
              C S    L DE    D E+    D         PV+  E + +F +++ Y
Sbjct: 157 INWCPSCETVLADEQVEGDAELCWRCD--------TPVEQRELDQWFLKITEY 201


>gi|312863569|ref|ZP_07723807.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517027|ref|ZP_08069915.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311101105|gb|EFQ59310.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322124395|gb|EFX95895.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 932

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPGWDTHGLPIEQVLAKQGVKRKELDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 AEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYQGAKPVYWSWSSESALAEAEI 198


>gi|289764155|ref|ZP_06523533.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis GM 1503]
 gi|289711661|gb|EFD75677.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis GM 1503]
          Length = 948

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 72  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAV 131

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L   +D
Sbjct: 132 QTGTHPRTRTEANVVNFRRQLGRLGFGHD 160


>gi|218755764|ref|ZP_03534560.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
          Length = 945

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L   +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGFGHD 157


>gi|119944944|ref|YP_942624.1| leucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166231632|sp|A1SU60|SYL_PSYIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119863548|gb|ABM03025.1| leucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 859

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 12/174 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    +     L   YD    + T +  ++   +  + K+ +K  +YK
Sbjct: 92  KNNTAPAGWTYENIAYMKTQLKQLGFGYDWSRELATCQPEYYRWEQWFFTKLVEKDLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
              +  +   D+    +++V  G     G     +  P QW      F +++AY
Sbjct: 152 KMATVNWDPVDQTVLANEQVIDGRGWRSGALVEQKEIP-QW------FIKITAY 198


>gi|315639610|ref|ZP_07894750.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484571|gb|EFU75027.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 930

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 40/270 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       ++        +PAD+++ G D  R  F++    +  ++   
Sbjct: 522 IMDVWFDSGSSHEAVLRQREDLS------FPADMYLEGSDQYRGWFNSSITTSVAINGVA 575

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V S GF L  +G K+SKSLGN I P +VI ++G D LR ++           Y+ 
Sbjct: 576 PY-KAVLSQGFTLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-------SSVDYES 627

Query: 344 DGLKKRVNADLANGIGNL---VSRSVSMILKDYDGMIPTPGAFTESD----ESILSV-CS 395
           D    RV+ D+ + +  +   +  ++  +L + +   P   +    D    +  ++V  +
Sbjct: 628 D---VRVSMDILSQVSEVYRKIRNTMRFLLANTEDFNPETDSVAYEDLRSVDKYMTVRLN 684

Query: 396 RVLQEIRENMQNQL----IHRALAQVISLVSEVDRYFDAQKP--WELKKTNPDR--ASTV 447
           +V++EIRE          I+R +   ++ V     Y D  K   +   K N DR    TV
Sbjct: 685 KVVKEIREKGYESYNFLHIYRTVINFLT-VDLSSFYLDFAKDVVYIEAKENHDRRCMQTV 743

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y T   + +   LL   +P  A +I+  L
Sbjct: 744 FYQTAVTLTK---LLTPIIPHTAEEIWSHL 770



 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GH+   I  D++ R   + G    +  G D HG  I +   N G+  K    
Sbjct: 58  YANGNIHLGHSLNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLTNKGIKRKEMSL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D ++  ++  T        R+   K+++KG 
Sbjct: 118 AEYRQKCYDYALTQVDKQRNDFKRLGVSGDWNH-PYVTLTPDYEAAEIRVF-GKMAEKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IYKG    ++S   E+   + E+
Sbjct: 176 IYKGLKPIYWSPSSESSLAEAEI 198


>gi|313806730|gb|EFS45235.1| isoleucine--tRNA ligase [Propionibacterium acnes HL087PA2]
 gi|313828830|gb|EFS66544.1| isoleucine--tRNA ligase [Propionibacterium acnes HL063PA2]
 gi|314969340|gb|EFT13438.1| isoleucine--tRNA ligase [Propionibacterium acnes HL037PA1]
 gi|314987422|gb|EFT31513.1| isoleucine--tRNA ligase [Propionibacterium acnes HL005PA2]
 gi|314989212|gb|EFT33303.1| isoleucine--tRNA ligase [Propionibacterium acnes HL005PA3]
 gi|315082183|gb|EFT54159.1| isoleucine--tRNA ligase [Propionibacterium acnes HL078PA1]
 gi|315082847|gb|EFT54823.1| isoleucine--tRNA ligase [Propionibacterium acnes HL027PA2]
 gi|315109882|gb|EFT81858.1| isoleucine--tRNA ligase [Propionibacterium acnes HL030PA2]
 gi|327333916|gb|EGE75633.1| isoleucine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327444614|gb|EGE91268.1| isoleucine--tRNA ligase [Propionibacterium acnes HL013PA2]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|228476843|ref|ZP_04061488.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
 gi|228251417|gb|EEK10562.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
          Length = 932

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPGWDTHGLPIEQVLAKQGVKRKELDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 AEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYQGAKPVYWSWSSESALAEAEI 198


>gi|298529743|ref|ZP_07017146.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511179|gb|EFI35082.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 834

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 8/178 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + Y+     YP+ + H+GH     I DV+AR   + G +VL   G D  G     AA
Sbjct: 33  DRPRYYVLEMFPYPSGRIHMGHVRNYSIGDVVARMKMMQGYNVLHPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  QN    R     L  SYD    + T    ++   ++ + K  +KG +Y
Sbjct: 93  IKNNTHPAHWTYQNIDYMRSELKRLGYSYDWSRELATCHPGYYQWEQLFFLKFYEKGLVY 152

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W         N+    +   GQ +    + V+  E   +F R++ Y ++LL
Sbjct: 153 RKKAPVNWCPTCVTVLANE----QVEAGQCWRCD-SMVEKRELSQWFLRITDYAEELL 205



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA---------NLPLPKKVFSHGFILH 298
           D    K+W P D ++ G +    H +Y   F + A         N P    + + G +L 
Sbjct: 525 DSEAIKYWLPVDQYIGGIEHAILHLLY-ARFFVKALRDLGYWDLNEPF-ANLLTQGMVLK 582

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            G K+SKS GNV+DP E+I   G D +R + +
Sbjct: 583 DGAKMSKSKGNVVDPDEMIRRFGADTVRLYCL 614


>gi|114769323|ref|ZP_01446949.1| valyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550240|gb|EAU53121.1| valyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 956

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 34/207 (16%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V+   +G  Y A        EEE     LS YQ K   Y  +  + ++     N  +   
Sbjct: 456 VWNDLEGNAYCATS------EEEAIEKALSKYQSK---YPNAKIKILVDDNPNNNSLDED 506

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
               K + LSR           DP  ++  W  +      T G+ +N    +  +   +L
Sbjct: 507 DGQTKTIVLSR-----------DPD-VLDTWFSSGLWPFGTLGWPENSKELERYYTSNNL 554

Query: 261 H---VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVI 311
           +   + G DI+ F    W A ++   +    KV      +H       G+K+SKS GNV+
Sbjct: 555 NRTLITGFDIIFF----WVARMMMMGIETMGKVPFETVYVHPLVRDEHGKKMSKSTGNVM 610

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD 338
           DP+++I++ G DA+R+ L    A G+D
Sbjct: 611 DPLDLIDKYGADAVRFTLTAMAAMGRD 637



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA+   + D+L R+HR+ G D L+  GTD           +AG+ T++ V++
Sbjct: 53 HMGHAFNNTLQDILIRWHRMRGFDTLWQPGTD-----------HAGIATQMVVER 96


>gi|94500493|ref|ZP_01307024.1| valyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427283|gb|EAT12262.1| valyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 953

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           IK+  D + ++  W  +     +T G+ +     K  F P D+ V G DI+ F       
Sbjct: 461 IKLSQD-EDVLDTWFSSALWTFSTLGWPEETPELKT-FHPTDVLVTGFDIIFFWVARMIM 518

Query: 278 FLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
             L     +P K V+ HG +   +G+K+SKS GNV+DP+++I+ + +++L
Sbjct: 519 MTLKFTGEVPFKTVYVHGLVRDQEGQKMSKSKGNVLDPLDIIDGIELESL 568


>gi|113971292|ref|YP_735085.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|122943610|sp|Q0HFY9|SYI_SHESM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113885976|gb|ABI40028.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 940

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + +  G      G        DL++ G D  R  F +    +  ++   P  
Sbjct: 536 VWYDSGSTFASVVGARPEFHGHGV-----DLYLEGSDQHRGWFMSSLMISTAMTGKAPY- 589

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  KG K+SKS+GNVI P +V  ++G D LR ++ 
Sbjct: 590 KQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVA 633



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGH+   I+ D++ +   + G D  +  G D HG        QK+ K  Q   
Sbjct: 59  YANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK-- 116

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++   F ++  R +   A+ +D    DFIR
Sbjct: 117 ISAAEFREE-CRKY--AAEQVDGQRADFIR 143


>gi|313231029|emb|CBY19027.1| unnamed protein product [Oikopleura dioica]
          Length = 1116

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYW----PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           ++P D+ V GKD+++ H  Y+     A   +     P+ V ++G +L  GEK+SKS GN 
Sbjct: 614 WYPVDVRVSGKDLVQNHLTYYLYNHVAMWENDKSKWPQSVRANGHLLLNGEKMSKSTGNF 673

Query: 311 IDPIEVIEEVGVDALRYFLV 330
           +   + IE+   D +R  L 
Sbjct: 674 LTLTDAIEKYSADGMRLALA 693


>gi|257387585|ref|YP_003177358.1| valyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169892|gb|ACV47651.1| valyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 908

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 35/239 (14%)

Query: 259 DLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPI 314
           DL   G DI+ F   H +    +  +  +P    V  +G +L +  E +SKS GNVI P 
Sbjct: 519 DLRPQGHDIISFWLFHTVV-KCYEHTGEVPF-DNVMINGMVLDENREAMSKSKGNVIPPS 576

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKD 372
           +V+EE  VDA RY+     + G D  Y +  L+  +R+   L N      SR V      
Sbjct: 577 DVLEEFPVDATRYWAAG-TSIGDDFPYKEGDLEAGERLLQKLWNA-----SRLVEQ---- 626

Query: 373 YDGMIPTPGAFTESDES--------ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--S 422
              + P P A    DES         L+     ++ + +  +     +A  ++ S    S
Sbjct: 627 ---LAPAPEAVDPVDESDLAPIDEWFLAELDATVESVTDRFEAYEFSKARNELRSFFWNS 683

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             D Y +  K    ++ + D +++  +      R    L   F+P +  +++D ++  D
Sbjct: 684 FCDDYLEIAK----QRLSGDGSASTEFALTRAHRTFLKLFAPFLPHITEELWDRIYRTD 738


>gi|221053332|ref|XP_002258040.1| leucine-trna ligase [Plasmodium knowlesi strain H]
 gi|193807873|emb|CAQ38577.1| leucine-trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 1291

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K YI     YP+AQ  H+GH     I DVLA+F R+    V    G D  G    + +
Sbjct: 153 RRKFYILDMFPYPSAQGLHMGHILCFTITDVLAKFKRMTNHCVFHPIGWDSFGLPCDRMS 212

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               V  +  + +N  NF++    +    ++D+ I T+++
Sbjct: 213 MKLKVDPREIIQKNILNFKEQVIKMGFLFNWDNEINTSDE 252


>gi|148244578|ref|YP_001219272.1| valyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326405|dbj|BAF61548.1| valyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 915

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 65/307 (21%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYW 275
           GI +  D   ++  W  +     +T G+ +  PD S+  F+P ++ V G DI+ F     
Sbjct: 438 GITLIQDKD-VLDTWFSSALWPFSTLGWPEKTPDLSR--FYPTNVLVTGFDIIFFWVARM 494

Query: 276 PAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV------------- 320
             F L     +P K ++  G I   +G+K+SKS GNV+DPI++I  +             
Sbjct: 495 IMFGLKFTGEVPFKDIYITGLIKDGQGQKMSKSKGNVLDPIDLINGITLKNLLEKRTQGL 554

Query: 321 ------------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DL 354
                                   G DALR+      +   D  +D     KRV    + 
Sbjct: 555 MQIKMAEKIKKQTRKEFANGIPAFGTDALRFTFATLASFSCDIKFD----IKRVEGYRNF 610

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N + N  SR V M LK     I T    + +DE ILS     LQ  + N++  L    +
Sbjct: 611 CNKLWN-ASRFVLMNLK--GKTIDTNAQLSTADEWILS----RLQNTKINVEKHLSDYRI 663

Query: 415 AQVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +   + E       D Y +  K   L + N  +  T   + ++V+ ++  LL   +P 
Sbjct: 664 DLMSQTLYEFIWHDYCDWYLELSK--SLLQNNKTKTGTQ-AILIKVLSEIVTLLHPIIPF 720

Query: 469 LANKIFD 475
           +  +IF+
Sbjct: 721 ITEEIFE 727



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA++  I D+L R+HR +G   L+  GTD  G
Sbjct: 50 HMGHAFQHTIMDILTRYHRANGEQTLWQPGTDHAG 84


>gi|308802504|ref|XP_003078565.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116057018|emb|CAL51445.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1011

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 20/115 (17%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++            ++   +PAD+++ G D  R  F +            P
Sbjct: 582 MDVWFDSGSSWAGVVK-------TRGMSFPADVYLEGSDQHRGWFQSSLLTGVGAMGQAP 634

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             K + +HGF+L  KG K+SKSLGNVIDP  VIE           G D LR ++ 
Sbjct: 635 Y-KTILTHGFVLDEKGYKMSKSLGNVIDPRTVIEGGKNQKQEPGYGADTLRLWVA 688



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++ E   +     Y N   HIGHA   I+ D + R+  ++G  V F  G D HG  I
Sbjct: 92  RDGEAFVLHDGPPYANGDLHIGHALNKILKDFVNRWEMMNGKKVRFVPGWDCHGLPI 148


>gi|91794074|ref|YP_563725.1| isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716076|gb|ABE56002.1| Isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 943

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ +++ T         G +      DL++ G D  R  F +    +  ++   P  
Sbjct: 539 VWYDSGSSFSTVVASRPEFHGHEV-----DLYLEGSDQHRGWFMSSLMISTAMNGKAPY- 592

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  KG K+SKS+GNVI P+ V  ++G D LR ++ 
Sbjct: 593 KQVLTHGFTVDGKGRKMSKSVGNVIAPLHVTNKLGADILRLWVA 636



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I  K  Q  G   K  +
Sbjct: 62  YANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKVEQKVG---KPGI 118

Query: 74  DQNSRNFRD-----MADVLDISYDDFIR 96
             ++  FR+      A  +D   DDFIR
Sbjct: 119 KISAAEFREECRKYAATQVDGQRDDFIR 146


>gi|322372695|ref|ZP_08047231.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
 gi|321277737|gb|EFX54806.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
          Length = 932

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKKGVKRKEIER 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 SEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYQGAKPVYWSWSSESALAEAEI 198


>gi|260914364|ref|ZP_05920833.1| valine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631465|gb|EEX49647.1| valine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 954

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S AI  PN     H+GHA++  + D+L RF+R++G + L+ TGTD           +AG+
Sbjct: 42 SIAIPPPNVTGSLHMGHAFQQTLMDILIRFNRMEGHNTLWQTGTD-----------HAGI 90

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 91 ATQMVVER 98


>gi|215406030|ref|ZP_03418211.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215448314|ref|ZP_03435066.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289747810|ref|ZP_06507188.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis 02_1987]
 gi|289760138|ref|ZP_06519516.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|294995655|ref|ZP_06801346.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|289688338|gb|EFD55826.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis 02_1987]
 gi|289715702|gb|EFD79714.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|326905802|gb|EGE52735.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis W-148]
          Length = 969

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L   +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGFGHD 157


>gi|156849147|ref|XP_001647454.1| hypothetical protein Kpol_1018p134 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118140|gb|EDO19596.1| hypothetical protein Kpol_1018p134 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1124

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRF--HAIYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 647 VLDTWFSSGLWPFSTLGW---PNKTKDMENFYPFSMLETGWDILFFWVSRMILLGIKLTG 703

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIAC 335
           N+P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      RE+  
Sbjct: 704 NIPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVIGGIKLEDLHAKLLTGNLDPREVEK 762

Query: 336 GKDG 339
            K G
Sbjct: 763 AKTG 766


>gi|114048530|ref|YP_739080.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944450|sp|Q0HS82|SYI_SHESR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113889972|gb|ABI44023.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 940

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + +  G      G        DL++ G D  R  F +    +  ++   P  
Sbjct: 536 VWYDSGSTFASVVGARPEFHGHGV-----DLYLEGSDQHRGWFMSSLMISTAMTGKAPY- 589

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  KG K+SKS+GNVI P +V  ++G D LR ++ 
Sbjct: 590 KQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVA 633



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGH+   I+ D++ +   + G D  +  G D HG        QK+ K  Q   
Sbjct: 59  YANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK-- 116

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++   F ++  R +   A+ +D    DFIR
Sbjct: 117 ISAAEFREE-CRKY--AAEQVDGQRADFIR 143


>gi|254183692|ref|ZP_04890284.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184214225|gb|EDU11268.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 967

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|313840352|gb|EFS78066.1| isoleucine--tRNA ligase [Propionibacterium acnes HL086PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|313817499|gb|EFS55213.1| isoleucine--tRNA ligase [Propionibacterium acnes HL046PA2]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|331232637|ref|XP_003328980.1| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309307970|gb|EFP84561.1| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1023

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 61/281 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP- 285
           +M VW D+  ++LT+ G              AD+ + G D  R          ++A  P 
Sbjct: 586 VMDVWFDSGVSWLTSDGAT------------ADMILEGSDQHRGWFQSQMLTFIAATQPH 633

Query: 286 -----LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE--------EVGVDALRYF--- 328
                + K V +HGF L K G K+SKS GNV+ P+E+I+          G+D LR++   
Sbjct: 634 QRDDLVYKSVVTHGFTLDKHGRKMSKSSGNVLSPLELIDGDETKKQPGFGIDVLRFWTAS 693

Query: 329 --LVREIACGKDGFYDKDGLKKRVNADLANGIGNLV------SRSVSMILKDYDGMIPTP 380
               R++  G D       + +++ +     +GN+       S  V +   D+ G+I   
Sbjct: 694 VDFTRDVTIGVDQLSRLSDVVRKIRSTARFLLGNVYRDDDVKSSEVGLSRGDF-GLI--- 749

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR------YFDAQKP- 433
                 +E +L     +L E ++++Q         QV+ L++          YF+  K  
Sbjct: 750 ------EEYML----HLLYEFQQSVQRAYNELDFKQVVQLITNFTTKTLSAFYFETVKDI 799

Query: 434 -WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   + +P+R   VL +  +V+    + +   +P LA +I
Sbjct: 800 LYSNAQGDPER-QRVLNLMSKVLEIYKLAIAPILPHLAEEI 839


>gi|126309571|ref|XP_001368890.1| PREDICTED: similar to Valyl-tRNA synthetase [Monodelphis domestica]
          Length = 1264

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 16/111 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL     +W A +      L+  LP  K+V+ H  +    G K+SKSL
Sbjct: 813 FYPGTLLETGHDIL----FFWVARMVMLGLKLTGKLPF-KEVYLHALVRDAHGRKMSKSL 867

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           GNVIDP++VI  + +  L   L+       +    K+G K    AD  NGI
Sbjct: 868 GNVIDPLDVISGLSLQGLHDQLLNSNLDPSEMEKAKEGQK----ADFPNGI 914



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 23/98 (23%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D L R+HR+ G   L+  G D           +AG+ T+V V++     
Sbjct: 351 HLGHALTNAIQDSLTRWHRMRGETTLWNPGCD-----------HAGIATQVVVEKKLWRE 399

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           R M+    +  + F+R            +WK  ++KGD
Sbjct: 400 RGMSR-HQLGREAFLRE-----------VWKWKNEKGD 425


>gi|15607183|ref|NP_214555.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15839418|ref|NP_334455.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31791218|ref|NP_853711.1| leucyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121635951|ref|YP_976174.1| leucyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148659801|ref|YP_001281324.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148821231|ref|YP_001285985.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167970567|ref|ZP_02552844.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215413901|ref|ZP_03422563.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215425235|ref|ZP_03423154.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215432951|ref|ZP_03430870.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|219555820|ref|ZP_03534896.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224988424|ref|YP_002643091.1| putative leucyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253796956|ref|YP_003029957.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis KZN 1435]
 gi|254366499|ref|ZP_04982543.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254548974|ref|ZP_05139421.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184897|ref|ZP_05762371.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260199034|ref|ZP_05766525.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260203182|ref|ZP_05770673.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289441409|ref|ZP_06431153.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289445567|ref|ZP_06435311.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis CPHL_A]
 gi|289552290|ref|ZP_06441500.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis KZN 605]
 gi|289567927|ref|ZP_06448154.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis T17]
 gi|289572617|ref|ZP_06452844.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis K85]
 gi|289748506|ref|ZP_06507884.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis T92]
 gi|289756100|ref|ZP_06515478.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis EAS054]
 gi|297632512|ref|ZP_06950292.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297729483|ref|ZP_06958601.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298527439|ref|ZP_07014848.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis 94_M4241A]
 gi|306801614|ref|ZP_07438282.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu008]
 gi|306805822|ref|ZP_07442490.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu007]
 gi|306974453|ref|ZP_07487114.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu010]
 gi|313656812|ref|ZP_07813692.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039674|sp|P67511|SYL_MYCBO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042037|sp|P67510|SYL_MYCTU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231619|sp|A1KEK9|SYL_MYCBP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231620|sp|A5TYB2|SYL_MYCTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782507|sp|C1AJ38|SYL_MYCBT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1568580|emb|CAB02520.1| PROBABLE LEUCYL-tRNA SYNTHETASE LEUS (LEUCINE--tRNA LIGASE) (LEURS)
           [Mycobacterium tuberculosis H37Rv]
 gi|13879089|gb|AAK44269.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31616803|emb|CAD92904.1| PROBABLE LEUCYL-tRNA SYNTHETASE LEUS (LEUCINE--tRNA LIGASE) (LEURS)
           [Mycobacterium bovis AF2122/97]
 gi|121491598|emb|CAL70056.1| Probable leucyl-trna synthetase leuS [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134152011|gb|EBA44056.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148503953|gb|ABQ71762.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148719758|gb|ABR04383.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis F11]
 gi|224771537|dbj|BAH24343.1| putative leucyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253318459|gb|ACT23062.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis KZN 1435]
 gi|289414328|gb|EFD11568.1| leucyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289418525|gb|EFD15726.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis CPHL_A]
 gi|289436922|gb|EFD19415.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis KZN 605]
 gi|289537048|gb|EFD41626.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis K85]
 gi|289541680|gb|EFD45329.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis T17]
 gi|289689093|gb|EFD56522.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis T92]
 gi|289696687|gb|EFD64116.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis EAS054]
 gi|298497233|gb|EFI32527.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis 94_M4241A]
 gi|308347713|gb|EFP36564.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu007]
 gi|308351629|gb|EFP40480.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu008]
 gi|308356236|gb|EFP45087.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis SUMu010]
 gi|323717380|gb|EGB26585.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis CDC1551A]
 gi|328456746|gb|AEB02169.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis KZN 4207]
          Length = 969

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L   +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGFGHD 157


>gi|14285780|sp|Q9PBG8|SYL_XYLFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 879

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 8/177 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA 
Sbjct: 35  KPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY- 120
              V    +  +N    R     L   I +     T +  ++   + ++ ++  KG  Y 
Sbjct: 95  KNKVAPAQWTYKNIERMRTQLKSLGYAIDWSREFATCQPDYYVHEQHMFTRLMRKGLAYR 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +     W  +      N+  +    DG+ + +   PV+  E   +F R++ Y  +LL
Sbjct: 155 RNALVNWDPVDQTVLANEQVI----DGRGWRSG-APVEKREIPQWFLRITDYAQELL 206



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  T Y  NPDGSK    PAD++V   +  R       A L+S   P+         ++ 
Sbjct: 587 IAETFYRKNPDGSKDWINPADVNVECDERGRITG----ATLISDGQPV---------LIG 633

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS  N +DP  ++ + G D +R F
Sbjct: 634 ATEKMSKSKNNGVDPQIMVTKYGADTVRLF 663


>gi|117921574|ref|YP_870766.1| isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166229771|sp|A0KZZ1|SYI_SHESA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117613906|gb|ABK49360.1| Isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 940

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + +  G      G        DL++ G D  R  F +    +  ++   P  
Sbjct: 536 VWYDSGSTFASVVGARPEFHGHGV-----DLYLEGSDQHRGWFMSSLMISTAMTGKAPY- 589

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  KG K+SKS+GNVI P +V  ++G D LR ++ 
Sbjct: 590 KQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVA 633



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 13/90 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGH+   I+ D++ +   + G D  +  G D HG        QK+ K  Q   
Sbjct: 59  YANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK-- 116

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++   F ++  R +   A+ +D    DFIR
Sbjct: 117 ISAAEFREE-CRKY--AAEQVDGQRADFIR 143


>gi|320157349|ref|YP_004189728.1| isoleucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932661|gb|ADV87525.1| isoleucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 948

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +       +  +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYAVVDKREEFNGAEA-----DMYLEGSDQHRGWFQSSLISSIAMKGKAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 37.0 bits (84), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|308233938|ref|ZP_07664675.1| isoleucyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943950|ref|ZP_08241415.1| isoleucine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491919|gb|EGF23693.1| isoleucine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 935

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 18/135 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   H+GHA   I  D++ R+  + G    F  G D HGQ I    + 
Sbjct: 50  DKFVLHDGPPYANGPIHLGHALNKISKDIINRYWSMRGFQTPFIPGWDCHGQPIEHKVEQ 109

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI 108
             + T+ F   ++   R++   + +   D  R   KR                 +D   I
Sbjct: 110 M-LGTQKFNQLSTAKIRELCRKMAVEQVDTQRQGFKRLGVLAKWNDPYLTYTHDYDATDI 168

Query: 109 -LWKKISDKGDIYKG 122
            ++KKI DKG IY+G
Sbjct: 169 EIFKKIYDKGSIYRG 183



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           PAD+++ G D    H  ++ + L+++     +   K V S GF L  +G K+SKSLGNVI
Sbjct: 571 PADMYLEGSDQ---HRGWFMSSLMTSVGAYGMAPYKSVVSQGFTLDGQGRKMSKSLGNVI 627

Query: 312 DPIEVIEEVGVDALRYFLV 330
           DP +V    G D +R ++ 
Sbjct: 628 DPNKVCATQGADIIRLWVA 646


>gi|217418644|ref|ZP_03450151.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217397948|gb|EEC37963.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 996

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 597 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 652

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 653 RAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 696


>gi|68249550|ref|YP_248662.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336023|sp|Q4QLU5|SYI_HAEI8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68057749|gb|AAX88002.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 941

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATNSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|37678871|ref|NP_933480.1| isoleucyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|81758302|sp|Q7MNM8|SYI_VIBVY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|37197612|dbj|BAC93451.1| isoleucyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 948

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +       +  +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYAVVDKREEFNGAEA-----DMYLEGSDQHRGWFQSSLISSIAMKGKAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|324121070|gb|AAC48266.3| Valyl amino-acyl trna synthetase protein 1, partially confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 978

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 19/165 (11%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G K+  DP  ++  W  +    L   G+L+   G+  +    ++   G DI  F    W 
Sbjct: 488 GDKMQQDPD-VLDTWFSSALVPLVKNGWLE---GAPIQTPSLNVMETGWDISGF----WV 539

Query: 277 AFLLSANLPLPK------KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A +++ N+ L        KV  HG +  ++G K+SKSLGNVIDP++V++ +  +     +
Sbjct: 540 ARMIALNMKLSSGETPFGKVVLHGLVRDNEGRKMSKSLGNVIDPLDVLDGITFEK----M 595

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +  +        + D   K +     NGI      ++   L  YD
Sbjct: 596 IERVKSSAHEKEEIDNAVKDLTKRFPNGISRCGPDALRFALLKYD 640


>gi|295129784|ref|YP_003580447.1| isoleucine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376109|gb|ADD99963.1| isoleucine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana]
          Length = 955

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L   +G     +PAD+++ G D  R  F +    +       P
Sbjct: 653 MDVWFDSGSSW---AGVLGKREGLS---FPADVYLEGTDQHRGWFQSSLLTSIATQGKAP 706

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  VIE
Sbjct: 707 Y-SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIE 739


>gi|150026393|ref|YP_001297219.1| leucyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166231606|sp|A6H244|SYL_FLAPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149772934|emb|CAL44418.1| Leucine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 962

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+ A  H+GH    I +D++ARF R  G +VL   G D  G    + A
Sbjct: 30  KPKYYILDMFPYPSGAGLHVGHPLGYIASDIVARFKRHKGFNVLHPQGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              G        +N   +R+  D +  S+D    IRT+   ++
Sbjct: 90  IQTGQHPDKTTKENIARYREQLDKIGFSFDWSREIRTSNANYY 132


>gi|55820807|ref|YP_139249.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822708|ref|YP_141149.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820317|sp|Q5M0C5|SYI_STRT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81820480|sp|Q5M4X2|SYI_STRT2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55736792|gb|AAV60434.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738693|gb|AAV62334.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 929

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVKRKELDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 AEYLKMCRDYALSQVDKQREDFKRLGVSADWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYQGAKPVYWSWSSESALAEAEI 198


>gi|27363971|ref|NP_759499.1| isoleucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81449064|sp|Q8DES7|SYI_VIBVU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27360088|gb|AAO09026.1| isoleucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 948

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +       +  +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYAVVDKREEFNGAEA-----DMYLEGSDQHRGWFQSSLISSIAMKGKAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|83855265|ref|ZP_00948795.1| leucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83843108|gb|EAP82275.1| leucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 848

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 12/180 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N  + RD    L +S D   +F  T +  ++   + L+     +G +
Sbjct: 90  MAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLSEGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W  +      N+  E  +G        +    QW      FF++S + ++LL
Sbjct: 149 YRKNAIVNWDPVDMTVLANEQVEAGRGWRSGALVERRELTQW------FFKISDHSEELL 202


>gi|330831173|ref|YP_004394125.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328806309|gb|AEB51508.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 953

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 13/115 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     + VW D+ + + +        +G      PAD+++ G D  R  F +    
Sbjct: 542 KVPD----TLDVWFDSGSTHASVVDARPEFNGK-----PADMYLEGSDQHRGWFMSSLMI 592

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              +    P   +V +HGF +  +G K+SKS+GNV+ P +V+ ++G D LR ++ 
Sbjct: 593 GVAMKDKAPY-NQVLTHGFTVDGQGRKMSKSIGNVVSPQDVMNKLGADILRLWVA 646


>gi|327457171|gb|EGF03826.1| isoleucine--tRNA ligase [Propionibacterium acnes HL092PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|315087908|gb|EFT59884.1| isoleucine--tRNA ligase [Propionibacterium acnes HL072PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|314980007|gb|EFT24101.1| isoleucine--tRNA ligase [Propionibacterium acnes HL072PA2]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|313114987|ref|ZP_07800480.1| leucyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622678|gb|EFQ06140.1| leucyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 849

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +FR     L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKNNVDHFRSQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           YK   +  +    +    ++EV  G   +  +   + V  QWM       +++AY DKL+
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWM------LKITAYADKLI 202



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKSLGNVI+P EV+++ G D +R +
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLY 650


>gi|268679124|ref|YP_003303555.1| isoleucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617155|gb|ACZ11520.1| isoleucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 918

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--NL 284
           I+ VW D+ + +       +   GS    +PA +++ G D  R    +  + L+S   N 
Sbjct: 538 ILDVWFDSGSTWKAVLESSEYDSGS----YPATMYLEGSDQHR--GWFQSSLLVSTANNG 591

Query: 285 PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             P  K+ +HGF +  KGEK+SKS GNV+ P +V ++ GV+ LR ++
Sbjct: 592 IAPYAKILTHGFTVDEKGEKMSKSKGNVVAPSDVAKQYGVEILRLWV 638



 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 24/49 (48%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           Y N   HIGHA   I+ DV+ + H   G  V +  G D HG  I +  +
Sbjct: 61  YANGHIHIGHALNKILKDVIIKTHYFFGEKVRYVPGWDCHGLPIEQQVE 109


>gi|94267665|ref|ZP_01290951.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451903|gb|EAT02631.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 946

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       D          PADL++ G D  R  F +    +       
Sbjct: 540 ILDVWFDSGVSFAAVLEQRDELTS------PADLYLEGSDQHRGWFQSSLLASVGTRGAA 593

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF++  +G+K+SKS+GNVI P ++I++ G + LR +   E
Sbjct: 594 PY-KAVLTHGFVVDGQGKKMSKSVGNVIAPDKIIKQHGAEILRLWAASE 641


>gi|21105441|gb|AAM34664.1|AF506220_1 valyl-tRNA synthetase [Danio rerio]
          Length = 505

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 12/78 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL F    W A +      L+  LP  K+V+ H  +    G K+SKSL
Sbjct: 51  FYPGTLLETGHDILFF----WVARMVMMGLKLTGKLPF-KEVYLHAVVRDAHGRKMSKSL 105

Query: 308 GNVIDPIEVIEEVGVDAL 325
           GNVIDP++VI  + ++ L
Sbjct: 106 GNVIDPLDVITGISLEGL 123


>gi|315928007|gb|EFV07327.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 284

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           L+ N P  + + + G +L  G K+SKS GNV+DP E+IE+ G D  R F++
Sbjct: 33  LTQNEPFDR-LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFIL 82


>gi|218282319|ref|ZP_03488609.1| hypothetical protein EUBIFOR_01191 [Eubacterium biforme DSM 3989]
 gi|218216692|gb|EEC90230.1| hypothetical protein EUBIFOR_01191 [Eubacterium biforme DSM 3989]
          Length = 908

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 16/114 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++  T   +D   G     +PADL+  G D  R  F++       +    P
Sbjct: 525 MDVWFDSGSSH--TGAMMDRGLG-----YPADLYFEGSDQYRGWFNSSLIVGTAVHGKAP 577

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             K+V SHGF++  KG K+SKS  N + P E+ ++ G D LR +     AC  D
Sbjct: 578 Y-KQVLSHGFVMDEKGVKMSKSQWNAVAPSEITKKYGADILRLW-----ACSVD 625



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +     Y N   H+GHA   ++ DV+ + H ++G    +  G D HG  I  A   
Sbjct: 48  ESFVLHDGPPYANGDIHLGHALNKVLKDVIVKSHFMEGYKTPYIPGWDTHGLPIETAVTK 107

Query: 65  AGVTTKVF----------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
            G   K                  V      F  +  + D  YD    T +K        
Sbjct: 108 LGYDRKKMGIAEFRKICYDYALKQVANQKAGFLSLGSIGD--YDHPYITLQKGFEKHQIE 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ K++ KG IYKG    ++S   E+   + EV
Sbjct: 166 IFGKMAMKGLIYKGLKPVYWSPSSESALAEAEV 198


>gi|195019854|ref|XP_001985069.1| GH16853 [Drosophila grimshawi]
 gi|193898551|gb|EDV97417.1| GH16853 [Drosophila grimshawi]
          Length = 949

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSA---NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           AD+++ G D  +F   +  + L S    N    K +F HGF +  KG K+SKS+GNVI P
Sbjct: 586 ADMYLEGYD--QFTGWFQSSLLTSIAARNCAPYKALFVHGFTVDEKGHKMSKSVGNVISP 643

Query: 314 IEVIEEVGVDALRYFLV 330
            ++ ++ G D LR+++ 
Sbjct: 644 KQITKKYGTDVLRWWVA 660



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---AKAAQNAGVTTKV 71
           Y N Q H+GHA   I+ D+  R   + G  V +  G D HG  I   A A   AG    +
Sbjct: 82  YANGQLHMGHAVNKILKDITLRQRVVQGQQVNYIPGWDCHGLPIELKATADAAAGEQNAL 141

Query: 72  FVDQNSRNF 80
            + Q SR F
Sbjct: 142 DIRQKSRAF 150


>gi|148284148|ref|YP_001248238.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225525|sp|A5CCE0|SYV_ORITB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|146739587|emb|CAM79339.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 854

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 220 IPDDPQYIMYVW-IDALTNYLTTTGYLDN--PDGSK-AKFWPADLHVIGKDILRFHAIYW 275
           IPD    +M  W   +L+  L++ G   N   D ++  + +PADL     +I+R    Y 
Sbjct: 465 IPDSD--VMDTWATSSLSPQLSSHGISSNLTIDSTRHNQLFPADLRSQAHEIIRTWTFYT 522

Query: 276 --PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
              ++L   +LP  K + S   +    +K+SKS GN+I P E+I+  G DA+RY+
Sbjct: 523 IVKSYLHQNSLPWSKIMISGWCLADDRKKMSKSKGNIILPTELIKRYGADAVRYW 577


>gi|83941787|ref|ZP_00954249.1| leucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83847607|gb|EAP85482.1| leucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 848

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 12/180 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
              G   K +   N  + RD    L +S D   +F  T +  ++   + L+     +G +
Sbjct: 90  MAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFA-TCDPEYYGQQQALFLDFLSEGLV 148

Query: 120 Y-KGCYSGWYSLRDEAYYNDD-EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y K     W  +      N+  E  +G        +    QW      FF++S + ++LL
Sbjct: 149 YRKNAIVNWDPVDMTVLANEQVEAGRGWRSGALVERRELTQW------FFKISDHSEELL 202



 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 29/173 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + N+
Sbjct: 619 KMSKSKKNVVDPLGIIANYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNI 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR   M             A    D+ +L    + + ++   +++   + A+A++ +  
Sbjct: 677 SSRIAEM----------DDSAAGTGDDDLLRAMHKTIHDVTMGVESFGFNAAIAKLYAFT 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +             L+K+   +A+       E I  LA L+    P LA +I+
Sbjct: 727 A------------TLQKSKAGKAA-----QREAIMTLAQLMAPMTPHLAEEIW 762


>gi|76798283|ref|ZP_00780530.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76586355|gb|EAO62866.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 599

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQVLAKKGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + +I  T     D  R+    ++DKG 
Sbjct: 118 AEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTPDYEADQVRVF-GAMADKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|145638215|ref|ZP_01793825.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272544|gb|EDK12451.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751370|gb|ADO81354.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 941

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   N   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATNSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|311105355|ref|YP_003978208.1| valyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760044|gb|ADP15493.1| valyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 964

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 16/111 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL-- 279
           DP  ++  W  +     TT G+ +N PD    ++ P+ + V G DI+ F    W A +  
Sbjct: 493 DPD-VLDTWFSSGLVPFTTLGWPENTPD--LQRYLPSSVLVTGFDIIFF----WVARMVM 545

Query: 280 ----LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
               L+ ++P  K V+ HG I    G+K+SKS GN +DP+++I+ + +D L
Sbjct: 546 LTTHLTGHIPF-KHVYVHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLDGL 595



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+ R+ G D +F  GTD           +AG+ T++ V++ 
Sbjct: 71  HMGHAFNQTIMDGLVRYRRMLGDDTVFIPGTD-----------HAGIATQIVVERQ 115


>gi|237510265|ref|ZP_04522980.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|235002470|gb|EEP51894.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 967

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|237807328|ref|YP_002891768.1| valyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499589|gb|ACQ92182.1| valyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 950

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 115/301 (38%), Gaps = 63/301 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +     K  F P D+ V G DI+ F    W A ++      
Sbjct: 472 VLDTWFSSALWTFSTLGWPEQTPELKT-FHPTDVLVTGFDIIFF----WVARMIMMTMHF 526

Query: 281 ------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEV------------- 320
                 +  +P  K V+  G I   +G+K+SKS GNV+DP+++I+ +             
Sbjct: 527 VKNEDGTPQVPF-KTVYVTGLIRDEEGQKMSKSKGNVLDPLDMIDGISLPDLLEKRTGNM 585

Query: 321 ------------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L    N    N
Sbjct: 586 MQPQLAEKIGKRTEKQFPDGIEAHGTDALRFTLAALASTGRDINWDMKRLDGYRN--FCN 643

Query: 357 GIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D G       F+ +D  I S     +QE+R  M      +A  
Sbjct: 644 KLWN-ASRYVLMNTEEQDCGFSGGEMQFSLADRWITSQLQLTIQELRHAMDTYRFDQAAG 702

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP     +  ++ +T  +  V V+  L  L    +P +   I
Sbjct: 703 VLYEFIWNQFCDWYLELTKPVLWHGSEAEQRAT-RHTLVTVLESLLRLAHPIMPFMTESI 761

Query: 474 F 474
           +
Sbjct: 762 W 762



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA++  I D L R+ R+ G + L+  GTD           +AG+ T++ V++
Sbjct: 49 HMGHAFQQTIMDALIRYQRMLGKNTLWQVGTD-----------HAGIATQMVVER 92


>gi|242789835|ref|XP_002481443.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218718031|gb|EED17451.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1124

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P D+ V GKD+++ H  ++  ++  A  P    P+ V ++G +L  GEK+SKS GN +
Sbjct: 711 FYPLDVRVSGKDLIQNHLTFF-LYIHIALFPQEYWPRGVRANGHLLLNGEKMSKSTGNFL 769

Query: 312 DPIEVIEEVGVDALR 326
              + +++ G DA R
Sbjct: 770 TLKDAVDKYGADATR 784


>gi|254172881|ref|ZP_04879555.1| leucyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033037|gb|EEB73865.1| leucyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 965

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          +K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+ 
Sbjct: 33 KKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGAPIVGIAER 92



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL-----PKKVFSHGFILHKGEKISKSLGN 309
           ++P D     KD++  H  +   F+ +          PK +  +GF   +G+K+SKS GN
Sbjct: 600 WYPLDWRCSAKDLIPNHLTF---FIFNHTAIFRREHWPKGIAVNGFGTLEGQKMSKSKGN 656

Query: 310 VIDPIEVIEEVGVDALRYFLV 330
           V++ I+ IEE G D +R +++
Sbjct: 657 VLNFIDAIEENGADVVRLYIM 677


>gi|147669562|ref|YP_001214380.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270510|gb|ABQ17502.1| Isoleucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 1014

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 17/275 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           +M  W D+    +    Y   P+     S  +F PAD      D  R  F++++  + L+
Sbjct: 548 VMDCWYDSGAMPVAQYHYPFEPESRTIASDGRF-PADYICEAVDQTRGWFYSLHAISTLI 606

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  + V   G IL  +GEK+SKS  NVI P  V+++ G DA+R++       G   
Sbjct: 607 FGR-PCYQNVICLGHILDERGEKMSKSKNNVIQPATVLDKYGADAVRWYFYTAAPPGNAR 665

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCS 395
            +  + L   V       + N+ S  V+    + D   P+     G   E D  ILS  +
Sbjct: 666 RFS-EKLVGEVTRQFLLMLWNIYSFFVT--YANIDNFTPSEKYLAGEVPELDRWILSELN 722

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EV 454
           +++ ++ + + N    +A  ++   V  +  ++  +      K+  D      Y  +   
Sbjct: 723 QLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSENDADKLSAYQALYTC 782

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +  L+ LL  F P +A +++  L +  +    +S+
Sbjct: 783 LVTLSKLLAPFTPFVAEELYQNLVLLVDQSALESV 817


>gi|271968380|ref|YP_003342576.1| leucyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270511555|gb|ACZ89833.1| leucyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 828

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 16/198 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA- 62
           RE+ Y+     YP+   H+GHA    I DV++R+    G +VL   G D  G     AA 
Sbjct: 43  RERRYMLDMFPYPSGDLHMGHAEVFAIGDVVSRYWFQRGYNVLHPIGWDSFGLPAENAAI 102

Query: 63  -QNAGVT--TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +NA     T   ++  + +F+  A   D S    + T++  ++   + L+ +  ++G  
Sbjct: 103 RRNAHPAEWTYANIETQAHSFKRYAVSFDWSRR--LHTSDAEYYRWTQWLFIRFFERGLA 160

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL- 177
           Y KG    W    D+    +++V    DG+        V+  E   ++F+++ Y D+LL 
Sbjct: 161 YRKGGLVNWCP-NDQTVLANEQV---KDGKCERCGAEVVR-RELTQWYFKITDYADRLLD 215

Query: 178 ---SYYESHPEFILPIER 192
                    PE +L ++R
Sbjct: 216 DMAQLEGGWPERVLTMQR 233



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 103/246 (41%), Gaps = 37/246 (15%)

Query: 244 YLDNP-DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSH 293
           Y D P D  K + W P D +V G +    H +Y   F        ++    P   ++ + 
Sbjct: 526 YEDGPFDVEKLRQWGPIDQYVGGVEHAVLHLLYSRFFTKVLHDMGMVDFTEPF-TRLLNQ 584

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G ++++G+ +SKSLGN +D  E I+  GVDA+R  +V       D  +          AD
Sbjct: 585 GQVINQGKAMSKSLGNGVDLGEQIDSYGVDAVRLTVVFAGPPEDDIDW----------AD 634

Query: 354 LANGIGN-LVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           ++       ++R+  ++ +   G    PG  F   D  +     R + E+ + + +   +
Sbjct: 635 VSPAASQKFLARAFRVMAE--AGAASAPGVDFATGDLDLRKAVHRTIDEVTKLVDSHRFN 692

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A+++ L S   +  D         + P  A   +    E    LA++L    P  A 
Sbjct: 693 VAVARMMELTSATRKAID---------SGPGAADPAVR---EAAETLAVMLSLVAPYTAE 740

Query: 472 KIFDIL 477
           + ++ L
Sbjct: 741 EGWERL 746


>gi|269958424|ref|YP_003328211.1| valyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848253|gb|ACZ48897.1| valyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 814

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 16/157 (10%)

Query: 255 FWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +P DL     +I+R  A Y    ++  +  +P    + S   +     K+SKS GN +D
Sbjct: 492 LFPTDLRAQSHEIIRSWAFYTMLKSYYHNGEIPWKNIMISGWCLAEDKTKMSKSKGNAMD 551

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMIL 370
           P   ++  G D++RY+  +    G D  + ++ LK  +R+   L N      S+ V+  L
Sbjct: 552 PESTLDLYGADSVRYWAAKS-RLGADTVFSEEVLKTGRRLTTKLWNA-----SKFVATFL 605

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +D      +P   T +  + L + S++ + +  N +N
Sbjct: 606 RD------SPPVSTTAAPTDLWILSKLHKAVAHNTEN 636


>gi|152998225|ref|YP_001343060.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082326|sp|A6W346|SYI_MARMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150839149|gb|ABR73125.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 940

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +   +P  K+V +HGF +   G K+SKSLGNV+ P
Sbjct: 557 PADLYLEGSDQHRGWFQSSLKTSIAIRG-VPPYKQVLTHGFTVDGDGRKMSKSLGNVLSP 615

Query: 314 IEVIEEVGVDALRYFLV 330
            +V++ +G D +R ++ 
Sbjct: 616 QKVMDTLGADIIRLWVA 632



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           K R+   +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG     K
Sbjct: 46  KGRKSFILHDGPPYANGSIHIGHAVNKILKDIIVKSKTVSGFDAPYIPGWDCHGLPIEHK 105

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIR 96
           + +    AG  TKV   +     R+ A   ++    DFIR
Sbjct: 106 VEQLIGKAG--TKVSYKEFRAKCREYAYTQIEEQKKDFIR 143


>gi|33519516|ref|NP_878348.1| valyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666719|sp|Q7VQT2|SYV_BLOFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33517179|emb|CAD83561.1| valyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 966

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 11/62 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA++  I D+L R+ R++G +VL+ +G D            AG+ T++ +++N  N 
Sbjct: 55  HLGHAFQQTIMDILVRYQRMNGKNVLWASGLDH-----------AGIATQILIEKNFYNK 103

Query: 81  RD 82
           ++
Sbjct: 104 KN 105


>gi|71902287|ref|ZP_00684281.1| FPG and IleRS zinc finger [Xylella fastidiosa Ann-1]
 gi|71727964|gb|EAO30185.1| FPG and IleRS zinc finger [Xylella fastidiosa Ann-1]
          Length = 373

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           PADL++ G D    H  ++ + LL+     N    K+  +HGF +   G K+SKSLGN I
Sbjct: 1   PADLYLEGADQ---HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGI 57

Query: 312 DPIEVIEEVGVDALRYFLV 330
           +P ++I+ +G D LR ++ 
Sbjct: 58  EPQDIIKTLGADILRLWIA 76


>gi|254191170|ref|ZP_04897675.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938843|gb|EDO94513.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 967

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|116627611|ref|YP_820230.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267791|sp|Q03L88|SYI_STRTD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116100888|gb|ABJ66034.1| Isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278132|gb|ADQ62789.1| Isoleucyl-tRNA synthetase IleS [Streptococcus thermophilus ND03]
          Length = 929

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLAKQGVKRKELDR 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 AEYLKMCRDYALSQVDKQREDFKRLGVSADWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYQGAKPVYWSWSSESALAEAEI 198


>gi|299529413|ref|ZP_07042851.1| leucyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722662|gb|EFI63581.1| leucyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 902

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  KNKVPPAKWTYENIAYMKKQMQAMGLAIDWSRE--VATCDPEYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+  ++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLGITNYAQELLDH 205

Query: 180 YE 181
            +
Sbjct: 206 VQ 207


>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1095

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L   +G     +PAD+++ G D  R  F +    +       P
Sbjct: 653 MDVWFDSGSSW---AGVLGKREGLS---FPADVYLEGTDQHRGWFQSSLLTSIATQGKAP 706

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  VIE
Sbjct: 707 Y-SAVITHGFVLDEKGMKMSKSLGNVVDPHLVIE 739


>gi|189188390|ref|XP_001930534.1| isoleucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972140|gb|EDU39639.1| isoleucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1079

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 18/254 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 548 KSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYP 607

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSM 368
           DP  ++   G DALR +L+       +    K+   K + + +   + N      + V++
Sbjct: 608 DPTLIMNNYGSDALRLYLINSPVVRAETLRFKEAGVKEIVSKVLLPLWNSYQFFEQQVTL 667

Query: 369 ILK--DYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           + K  D D +       T +   D  IL+ C  +L+ + E M    ++  + +++ L+  
Sbjct: 668 LKKVADLDFVFDPAAGKTNANVLDRWILASCQSLLKFVNEEMAAYRLYTVVPRLLELIDN 727

Query: 424 VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--- 479
              ++       LK  +  +     L    EV+  L   L  F P + + I+  L     
Sbjct: 728 TTNWYIRFNRRRLKGEHGLEDTKHALNTLFEVLYTLCRGLAPFTPFITDNIYLRLLPHIP 787

Query: 480 ----ADENRCFQSL 489
               A++NR  Q L
Sbjct: 788 KELHAEDNRSIQFL 801



 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 19/127 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------------KAA 62
           +    PH GH     I D++ R+  + G  V    G D HG  I              A 
Sbjct: 43  FATGMPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYEIDKELGMSGRDAV 102

Query: 63  QNAGVT-----TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISD 115
           +  G+       +  V + +  +R   D L   I +D+  +T +    +T   ++K++ D
Sbjct: 103 REIGIAKYNEKCRAIVMRYATEWRATIDRLGRWIDFDNDYKTMDTSFMETEWWVFKRLFD 162

Query: 116 KGDIYKG 122
           KG +Y+G
Sbjct: 163 KGAVYRG 169


>gi|167923006|ref|ZP_02510097.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 967

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + V +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|149369514|ref|ZP_01889366.1| isoleucyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356941|gb|EDM45496.1| isoleucyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 1132

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +       Y  +N +  +  +  AD    G D  R  F+ ++  A ++  ++  
Sbjct: 606 VWFDSGSMPYAQWHYPFENKEKVETTWRKADFIAEGVDQTRGWFYTLHAIATMIFDDVAY 665

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V S+G +L K G+K+SK LGN  DP E ++  G DA R++++       +  +D DG
Sbjct: 666 -KNVVSNGLVLDKNGQKMSKRLGNAADPFETLKTYGPDATRWYMISNANPWDNLKFDLDG 724

Query: 346 LKKRVN 351
           + +  N
Sbjct: 725 ISEVRN 730


>gi|254233441|ref|ZP_04926767.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis C]
 gi|124603234|gb|EAY61509.1| leucyl-tRNA synthetase leuS [Mycobacterium tuberculosis C]
          Length = 969

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ +  H+GH    I  DV AR+ R+ G +VL   G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAV 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L   +D
Sbjct: 129 QTGTHPRTRTEANVVNFRRQLGRLGFGHD 157


>gi|90412466|ref|ZP_01220469.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90326503|gb|EAS42909.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 948

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 544 VWFDSGVTHFSVVDSREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSVAMKGKAPY- 597

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 598 NQVLTHGFVVDGQGRKMSKSVGNVVAPKDVTNKLGADILRLWVA 641



 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFILHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|260772179|ref|ZP_05881096.1| valyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260613046|gb|EEX38248.1| valyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 952

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 17/111 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ DN D  K  F P+D+ V G DI+ F    W A ++   +  
Sbjct: 472 VLDTWFSSALWTFGTQGWPDNTDALKT-FHPSDVLVTGFDIIFF----WVARMIMMTMHF 526

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                    +P K V+  G I    G+K+SKS GNV+DPI++I+ + +++L
Sbjct: 527 CKDEHGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESL 577


>gi|169837796|ref|ZP_02870984.1| Methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 186

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 15/121 (12%)

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQ 457
           ++ +++ N      L  +   +S +++Y D  +PW+L K     DR STV+Y  V+ + +
Sbjct: 1   DLDKHINNYQFSEGLKDIWKFISRMNKYIDECEPWKLSKDENQKDRLSTVMYNLVDSLYK 60

Query: 458 LAILLQAFVPKLANKIFDIL--------FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +A+++  F+P+   K+ D L         + D+ R ++S     K G  +     P+FPR
Sbjct: 61  IAVVISPFMPETGQKMIDQLGLDKDVTKLLLDDVREWKSYPVGNKLGKAV-----PLFPR 115

Query: 510 F 510
            
Sbjct: 116 I 116


>gi|124003778|ref|ZP_01688626.1| leucyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990833|gb|EAY30300.1| leucyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 935

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ +  HIGH      +D++AR+ R+ G +VL   G D  G    + A
Sbjct: 30  KPKYYTLDMFPYPSGKGLHIGHPLGYTASDIMARYKRMKGFNVLHPMGFDSFGLPAEQHA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            + G    V  +QN   F+     L   +D
Sbjct: 90  IDTGQHPAVTTEQNIATFKSQLSKLGFCFD 119


>gi|26341092|dbj|BAC34208.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF- 72
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG  I  K     GV  +   
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQSLS 176

Query: 73  ---VDQNSRNFRDMA 84
              + + +R+F   A
Sbjct: 177 AMEIREKARSFAQAA 191



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 13/85 (15%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ GKD L   F +    +    +  P  + V  HGF L  KGEK+SKSLGNVI+P 
Sbjct: 618 ADLYLEGKDQLGGWFQSSLLTSVATRSKAPF-RTVMVHGFTLGEKGEKMSKSLGNVINPD 676

Query: 315 EVIE---------EVGVDALRYFLV 330
            +I            G D LR+++ 
Sbjct: 677 TIISGGKDHSKEPPYGADILRWWIA 701


>gi|71908698|ref|YP_286285.1| valyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|90103535|sp|Q47BG6|SYV_DECAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71848319|gb|AAZ47815.1| valyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 943

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 12/79 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGEKISKS 306
           ++ P+ + V G DI+ F    W A +      ++  +P  K V+ HG I   +G+K+SKS
Sbjct: 491 QYLPSSVLVTGFDIIFF----WVARMVMMTKQITGQIPF-KHVYVHGLIRDGEGQKMSKS 545

Query: 307 LGNVIDPIEVIEEVGVDAL 325
            GNV+DPI++I+ +G++AL
Sbjct: 546 KGNVLDPIDLIDGIGLEAL 564



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GH +   I D L R++R+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHGFNQTIMDALTRYYRMRGHNTLWQPGTD-----------HAGIATQIVVERQ 96


>gi|29832031|ref|NP_826665.1| leucyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|48428539|sp|Q82C66|SYL_STRAW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29609149|dbj|BAC73200.1| putative leucyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 962

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K ++     YP+ A  H+GH    I  DV ARF R+ G +VL T G D  G    + A
Sbjct: 58  KPKKFVMDMFPYPSGAGLHVGHPLGYIATDVFARFQRMTGHNVLHTLGFDAFGLPAEQYA 117

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   +V  + N  N +     L + +D
Sbjct: 118 VQTGTHPRVSTEANIENMKVQLRRLGLGHD 147



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 18/140 (12%)

Query: 294 GFILHKGEKIS-------KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           G   ++GEK+S       KSL N + P E+  E G D LR +   E+A G         +
Sbjct: 718 GAYYYQGEKVSRLLGKMGKSLKNAVTPDEICAEYGADTLRLY---EMAMG------PLDV 768

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +  +     G   L+ R    ++ +  G +    A  E DE  L    + +  +R++++
Sbjct: 769 SRPWDTRAVVGQFRLLQRLWRNVVDEATGEVTVVDA--EPDEETLRALHKAIDGVRQDLE 826

Query: 407 NQLIHRALAQVISLVSEVDR 426
               + A+A+V  L +++ +
Sbjct: 827 GMRFNTAIAKVTELNNQLTK 846


>gi|240103889|ref|YP_002960198.1| leucyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911443|gb|ACS34334.1| Leucyl-tRNA synthetase (leuS) [Thermococcus gammatolerans EJ3]
          Length = 968

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 6  KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+ 
Sbjct: 36 KFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGAPIVGIAER 94



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D     KD++  H      F +  ++ +      PK +  +GF   +G+K+SKS G
Sbjct: 602 WYPLDWRCSAKDLIPNHL----TFFIFNHVAIFRREHWPKGIAVNGFGTLEGQKMSKSKG 657

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 658 NVLNFIDAIEENGADVVRLYIM 679


>gi|300690677|ref|YP_003751672.1| isoleucine--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077737|emb|CBJ50375.1| Isoleucine--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 960

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 20/230 (8%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  FH+    A +L    P  K + +HGF +  +G K+SKS+GN I P 
Sbjct: 588 ADLYLEGSDQHRGWFHSSLLTASMLYGKPPY-KALLTHGFTVDGEGRKMSKSIGNTIAPQ 646

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+  ++G + +R ++      G+    D+  + KRV  +    I N + R +   L DYD
Sbjct: 647 EIAGKMGAEIIRLWVASTDYSGELAISDE--ILKRV-VEGYRRIRNTL-RFLLANLTDYD 702

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                +P P  + E D   +++   + +EI  +      H  ++++ +  SE     Y D
Sbjct: 703 HARHALP-PEQWLEIDRYAVALTDALQKEILSHYDVYEFHPVVSKLQTFCSEDLGGFYLD 761

Query: 430 AQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K   L  T PD      A   LY   + +        +F  + A ++F
Sbjct: 762 VLKD-RLYTTAPDSVARRSAQNALYHITQAMLHWMAPFLSFTAEEAWQVF 810



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  +K  +     Y N   HIGHA   I+ D++ +   L GLD ++  G D HG  I   
Sbjct: 55  KGAKKFILHDGPPYANGDLHIGHAVNKILKDMVIKSRGLAGLDAVYVPGWDCHGMPIEIQ 114

Query: 59  -----AKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRI 108
                 K      V  K      ++  R   D     VL    D ++    +   D  R 
Sbjct: 115 IEKQFGKGLPVKEVQEKARAYAATQIARQKVDFERLGVLGDWADPYLTMNFRNEADEVRA 174

Query: 109 LWKKISDKGDIYKG 122
           L  KI +KG +++G
Sbjct: 175 L-GKILEKGYVFRG 187


>gi|74184865|dbj|BAE39055.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF- 72
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG  I  K     GV  +   
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQSLS 176

Query: 73  ---VDQNSRNFRDMA 84
              + + +R+F   A
Sbjct: 177 AMEIREKARSFAQAA 191



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 13/85 (15%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ GKD L   F +    +    +  P  + V  HGF L  KGEK+SKSLGNVI+P 
Sbjct: 618 ADLYLEGKDQLGGWFQSSLLTSVATRSKAPF-RTVMVHGFTLGEKGEKMSKSLGNVINPD 676

Query: 315 EVIE---------EVGVDALRYFLV 330
            +I            G D LR+++ 
Sbjct: 677 TIISGGKDHSKEPPYGADILRWWIA 701


>gi|38490690|ref|NP_941055.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|81896262|sp|Q8BIJ6|SYIM_MOUSE RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
 gi|26339478|dbj|BAC33410.1| unnamed protein product [Mus musculus]
 gi|30931090|gb|AAH52403.1| Isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 1012

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF- 72
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG  I  K     GV  +   
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQSLS 176

Query: 73  ---VDQNSRNFRDMA 84
              + + +R+F   A
Sbjct: 177 AMEIREKARSFAQAA 191



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 13/85 (15%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ GKD L   F +    +    +  P  + V  HGF L  KGEK+SKSLGNVI+P 
Sbjct: 618 ADLYLEGKDQLGGWFQSSLLTSVATRSKAPF-RTVMVHGFTLGEKGEKMSKSLGNVINPD 676

Query: 315 EVIE---------EVGVDALRYFLV 330
            +I            G D LR+++ 
Sbjct: 677 TIISGGKDHSKEPPYGADILRWWIA 701


>gi|314926520|gb|EFS90351.1| isoleucine--tRNA ligase [Propionibacterium acnes HL036PA3]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|289432820|ref|YP_003462693.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946540|gb|ADC74237.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 1014

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 17/275 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           +M  W D+    +    Y   P+     S  +F PAD      D  R  F++++  + L+
Sbjct: 548 VMDCWYDSGAMPVAQYHYPFEPESRTIASDGRF-PADYICEAVDQTRGWFYSLHAISTLI 606

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  + V   G IL  +GEK+SKS  NVI P  V+++ G DA+R++       G   
Sbjct: 607 FGR-PCYQNVICLGHILDERGEKMSKSKNNVIQPATVLDKYGADAVRWYFYTAAPPGNAR 665

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCS 395
            +  + L   V       + N+ S  V+    + D   P+     G   E D  ILS  +
Sbjct: 666 RFS-EKLVGEVTRQFLLMLWNIYSFFVT--YANIDNFTPSEKYLAGEVPELDRWILSELN 722

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EV 454
           +++ ++ + + N    +A  ++   V  +  ++  +      K+  D      Y  +   
Sbjct: 723 QLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSENDADKLSAYQALYTC 782

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +  L+ LL  F P +A +++  L +  +    +S+
Sbjct: 783 LVTLSKLLAPFTPFVAEELYQNLVLLVDQSALESV 817


>gi|315086421|gb|EFT58397.1| isoleucine--tRNA ligase [Propionibacterium acnes HL002PA3]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|317131331|ref|YP_004090645.1| leucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469310|gb|ADU25914.1| leucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 800

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 6   KLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K Y      YP+ Q  H+GH       D+++R  RL+G +VL+  G D  G      A  
Sbjct: 32  KFYALVEFPYPSGQGLHVGHPRSYTALDIVSRKRRLEGYNVLYPMGWDAFGLPTENFAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             +  ++    N  +F+     L +S+D    I TT+  ++   + ++ ++  KG  YK
Sbjct: 92  NHIHPEIVTKNNVAHFKQQLQSLGLSFDWSREINTTDPLYYRWTQWIFLQLFKKGLAYK 150



 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 11/85 (12%)

Query: 254 KFW-PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFIL-HKGEKI 303
           ++W P D +  G +    H +Y   W   L    +     P  K+  SHG IL   GEK+
Sbjct: 522 RYWLPVDWYNGGMEHTTLHLLYSRFWHKALFDLGIVPTSEPYQKRT-SHGMILGENGEKM 580

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYF 328
           SKS GNV++P E+++  G D LR +
Sbjct: 581 SKSRGNVVNPDEMVKAYGADTLRLY 605


>gi|117619483|ref|YP_855224.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166228633|sp|A0KG39|SYI_AERHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117560890|gb|ABK37838.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 953

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 13/115 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWP 276
           K+PD     + VW D+ + + +        +G+     PAD+++ G D  R  F +    
Sbjct: 542 KVPD----TLDVWFDSGSTHSSVVDARPEFNGN-----PADMYLEGSDQHRGWFMSSLMI 592

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              +    P   +V +HGF +  +G K+SKS+GNV+ P +V+ ++G D LR ++ 
Sbjct: 593 GVAMKDKAPY-NQVLTHGFTVDGQGRKMSKSIGNVVSPQDVMNKLGADILRLWVA 646


>gi|79330394|ref|NP_001032042.1| OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/
           isoleucine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 955

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L   +G     +PAD+++ G D  R  F +    +       P
Sbjct: 653 MDVWFDSGSSW---AGVLGKREGLS---FPADVYLEGTDQHRGWFQSSLLTSIATQGKAP 706

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  VIE
Sbjct: 707 Y-SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIE 739


>gi|83770539|dbj|BAE60672.1| unnamed protein product [Aspergillus oryzae]
          Length = 1097

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 11/236 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 568 KSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYP 627

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMI 369
           DP  ++   G DALR +L+       +    K+   K + A +   + N          +
Sbjct: 628 DPSLIMNRYGSDALRLYLINSPVVRAEPLRFKEAGVKEIVAKVLLPLWNSYKFFEGQVAL 687

Query: 370 LKDYDGM--IPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           LK   G+  +  P A   +    D  IL+ C  +L+ + E M    ++  + +++ L+  
Sbjct: 688 LKKSQGVDYVFDPKAEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLGLIDN 747

Query: 424 VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++       LK  N  D     L    EV+  L   L  F P L + I+  L 
Sbjct: 748 TTNWYIRFNRRRLKGENGVDDTLHALNTLFEVLYTLVRGLAPFTPFLTDTIYQKLL 803


>gi|38234854|ref|NP_940621.1| leucyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|60390714|sp|Q6NEF5|SYL_CORDI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|38201118|emb|CAE50842.1| leucyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 960

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV ARF+R+ G +VL T G D  G    + A 
Sbjct: 62  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARFNRMLGKNVLHTLGYDAFGLPAEQYAI 121

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 122 QTGTHPRTTTMANIANMQRQLGALGLGHD 150


>gi|320527687|ref|ZP_08028859.1| leucyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131930|gb|EFW24488.1| leucyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 799

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 17/198 (8%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+    H GH       DV+ R  R+ G +VL   G D  G    + A
Sbjct: 31  KPKYYALDMFPYPSGSGLHAGHPEGYTATDVICRMKRMQGFNVLHPMGFDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     F ++N   F+        SYD    I T +   +   + ++K++ + G   
Sbjct: 91  IKTGNNPATFTEKNIETFKKQLRAFGFSYDWEREISTADPSFYHWTQWIFKRLFEDG--L 148

Query: 121 KGCYSGWYSLRDE--AYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
             C     +  +E     ++DEV  G    G Y   + N  QW+        + AY +KL
Sbjct: 149 AKCVDMPVNWCEELGTVLSNDEVIDGKSERGGYPVIRKNMRQWV------IDIPAYAEKL 202

Query: 177 LSYYES--HPEFILPIER 192
           L   E+   PE    I+R
Sbjct: 203 LEGLETIDWPESTKEIQR 220


>gi|313226866|emb|CBY22011.1| unnamed protein product [Oikopleura dioica]
          Length = 880

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 21/234 (8%)

Query: 261 HVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILHK-GEKISKSLGNVIDPIE 315
           H I + I +    ++   +LS +L    P  K V  +G +L + G K+SKS  N  DP  
Sbjct: 556 HFIAEGIDQTRGWFYTLIVLSTHLFGKAPF-KNVIVNGLVLAEDGNKMSKSKRNFPDPKL 614

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           + ++ G DA+R +L+  +A        K+   K +  D+     N     V  IL+    
Sbjct: 615 LFDKYGADAIRLYLISSVAVAGGDLRFKEQEVKEMIRDVFLPWYNAYRFLVQNILRH--- 671

Query: 376 MIPTPGAFTES-----------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            I T   FT             D+ ILS    +++ ++E M+   ++R + +++  V ++
Sbjct: 672 QIDTNSTFTYDPALIGTSDNIMDKWILSYSQSLIKSVKEEMETYQLNRVVPKLLKFVDQL 731

Query: 425 DRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++       LK +T  +     L     VI  +  L+    P L   ++  L
Sbjct: 732 TNWYVRLNRRRLKGETGAEDCVHALTTLYTVIDWMNRLMAPATPFLTEHLYQNL 785


>gi|297537731|ref|YP_003673500.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257078|gb|ADI28923.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 939

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 21/245 (8%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P    + +HGF++   G K+SKS GNV+ P
Sbjct: 568 PADLYLEGSDQHRGWFQSSLLTGCAIDGRAPY-NALLTHGFVVDGAGHKMSKSKGNVVAP 626

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V++  G D LR +       G+    D+  + KRV A+    I N +   ++ I  D+
Sbjct: 627 QKVMDTYGADILRLWTASTDYSGELTISDE--ILKRV-AESYRRIRNTMKFLLANI-ADF 682

Query: 374 DG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D    ++P    + E D   L +  ++  E+  +      H A+ + +S  SE     Y 
Sbjct: 683 DANKDLLPV-NEWLEIDRYALHLTQKLQTEVLADYDRYEFHLAVQKFVSFCSEDLGGFYL 741

Query: 429 DAQKP--WELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           D  K   +   + +P R  A + L+     + +L   + +F    AN+I+  L +  +  
Sbjct: 742 DILKDRLYTAGENSPARRAAQSALHHITHCMMRLMAPILSFT---ANEIWQTLGLETDKT 798

Query: 485 CFQSL 489
            F+ +
Sbjct: 799 VFEDV 803



 Score = 37.0 bits (84), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K  +K  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I
Sbjct: 50  KGAKKFILHDGPPYANGDIHIGHAVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPI 106


>gi|115492075|ref|XP_001210665.1| isoleucyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114197525|gb|EAU39225.1| isoleucyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 1078

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 11/232 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 549 KGFPGDFIAEGLDQTRGWFYTLTVLGTHLFGRLPFKNCVVNGIVLAEDGKKMSKRLKNYP 608

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMI 369
           DP  ++++ G DALR +L+       +    K+   K + A +   + N        + +
Sbjct: 609 DPALIMQKYGSDALRLYLINSPVVRAEPLRFKESGVKEIVAKVLLPLWNSYKFFEGQAAL 668

Query: 370 LKDYDGM--IPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            K  +G+  +  P A   +    D  IL+ C  +L+ + E M    ++  + +++ L+  
Sbjct: 669 FKKNNGIDYVFDPKAEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDN 728

Query: 424 VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              ++       LK  N  D     L    EV+  L   L  F P + + I+
Sbjct: 729 TTNWYIRFNRKRLKGENGVDDTQHALNTLFEVLFTLVRGLAPFTPFITDTIY 780


>gi|94264111|ref|ZP_01287910.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93455527|gb|EAT05717.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 949

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+  ++       D          PADL++ G D  R  F +    +       
Sbjct: 543 ILDVWFDSGVSFAAVLEQRDELTS------PADLYLEGSDQHRGWFQSSLLASVGTRGAA 596

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           P  K V +HGF++  +G+K+SKS+GNVI P ++I++ G + LR +   E
Sbjct: 597 PY-KAVLTHGFVVDGQGKKMSKSVGNVIAPDKIIKQHGAEILRLWAASE 644


>gi|26335861|dbj|BAC31631.1| unnamed protein product [Mus musculus]
          Length = 560

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF- 72
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG  I  K     GV  +   
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQSLS 176

Query: 73  ---VDQNSRNFRDMADVLDISYDDFIR 96
              + + +R+F   A  ++     F+R
Sbjct: 177 AMEIREKARSFAQAA--IEKQKSAFVR 201


>gi|83319396|ref|YP_424373.1| isoleucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283282|gb|ABC01214.1| isoleucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 908

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + +   P  +++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDIYLEGNDQYRGWFNASMINSTIYANKSPY-RQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           IE   E+G D LR ++
Sbjct: 607 IEFSNELGADILRLWV 622



 Score = 40.0 bits (92), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 23/160 (14%)

Query: 1   MKEREKLYI-STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + E +K++I      Y N   HIGHA    + D + R+    G    F  G D HG  I 
Sbjct: 45  LNENKKVFILHDGPPYANGDLHIGHALNKTLKDFIVRYRNAAGYYSPFIMGWDTHGLPIE 104

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDM------------ADVLD-----ISYD-DFIRTTEKR 101
            A    GV  K     +S  FR++            AD  +       YD  ++  T   
Sbjct: 105 SAVTKMGVDRK---SMSSVAFRELCYKYALGQIQNQADQFNRLGMFTDYDVKYVTLTHDF 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                R L++K+  KG IYK     ++S   E    D E+
Sbjct: 162 EMSELR-LYEKMYQKGLIYKDLKPIYWSPSSETALADSEI 200


>gi|260063616|ref|YP_003196696.1| valyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783061|gb|EAR14234.1| valyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 876

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 16/150 (10%)

Query: 221 PDDPQY---IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
           PDD +    ++  W  +    ++  G +  P+  +  ++ P    V G DIL F    W 
Sbjct: 448 PDDLRQDEDVLDTWFSSWIWPISVFGGILEPENEEVSYYYPTTDLVTGPDILFF----WV 503

Query: 277 AFLLSANLPLP-----KKVFSHGFILHKGE-KISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++ A          + V+  G +  K   K+SKSLGN  D +E+I E G D +R  L+
Sbjct: 504 ARMIIAGYEFRGERPFETVYLTGLVRDKQRRKMSKSLGNSPDALELISEFGADGVRVGLL 563

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGN 360
              A G D  +D+   ++  N   AN I N
Sbjct: 564 LSAAAGNDLLFDESLCQQGKN--FANKIWN 591


>gi|328758118|gb|EGF71734.1| isoleucine--tRNA ligase [Propionibacterium acnes HL020PA1]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|329956968|ref|ZP_08297536.1| valine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523725|gb|EGF50817.1| valine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 894

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 502 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 556

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           GN  DP+++IE  G D +R  ++     G D  +D
Sbjct: 557 GNSPDPLDLIERYGADGVRMGMMLSAPAGNDILFD 591


>gi|322369387|ref|ZP_08043952.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551119|gb|EFW92768.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 495

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 14/180 (7%)

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI 317
           D+HV G+D++  H     A   +A      + + H  +L  +GEK+S SLGN       I
Sbjct: 244 DIHVGGQDLVFPHHENEIAQSEAATGHQFARYWLHVRLLETEGEKMSSSLGNYSTVRGAI 303

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            E+G +A+R FL+      +  F D+  L + V  +  + + +   R+V  +    DG  
Sbjct: 304 SEIGANAVRMFLLSTSYANRQTFSDET-LNEAV--ERWDRLSDGYDRAVEAL----DG-- 354

Query: 378 PTPGAFTE-SDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWE 435
             P A T+  D+ +    +   +E  + M +     RALA ++ LV+ V+R+ DA + ++
Sbjct: 355 --PDARTKVEDDELRQAVTETREEFADAMNDDFNTRRALAALLDLVTAVNRHADAHEEYD 412


>gi|315221950|ref|ZP_07863861.1| isoleucine--tRNA ligase [Streptococcus anginosus F0211]
 gi|315188916|gb|EFU22620.1| isoleucine--tRNA ligase [Streptococcus anginosus F0211]
          Length = 930

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V  + G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVERQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV       
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGYYAPYIPGWDTHGLPIEQVLAKQGV------- 110

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
              R   D+A+ L +  D  +   +K+  D  R+                       ++ 
Sbjct: 111 --KRKEMDLAEYLKLCRDYALSQVDKQREDFKRLGVSGDWEHPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|313821285|gb|EFS58999.1| isoleucine--tRNA ligase [Propionibacterium acnes HL036PA1]
 gi|313824771|gb|EFS62485.1| isoleucine--tRNA ligase [Propionibacterium acnes HL036PA2]
 gi|314961576|gb|EFT05677.1| isoleucine--tRNA ligase [Propionibacterium acnes HL002PA2]
          Length = 1122

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                 + + G++P   A TE    D  ++S  + +++++ E + N    R    +   V
Sbjct: 740 PPAVGSRGFGGVVPP--AVTERHVLDRWLVSATNVLVRDVTEALNNFDTQRVGNLIAQFV 797

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E+  ++  +     ++   D     L+   E +  L  L+   VP +  +++  LFV
Sbjct: 798 DELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFITERVWQDLFV 851


>gi|300176388|emb|CBK23699.2| unnamed protein product [Blastocystis hominis]
          Length = 1091

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 10/77 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHK-GEKISKSLG 308
           F+P  L   G DIL F    W A ++  +L L      ++V+ H  I  K G K+SKSLG
Sbjct: 621 FFPTTLLETGHDILFF----WVARMVMMSLELTDKLPFRQVYLHAMIRDKYGRKMSKSLG 676

Query: 309 NVIDPIEVIEEVGVDAL 325
           NVIDP+E+I    ++++
Sbjct: 677 NVIDPLEIINGCDLESM 693


>gi|239814275|ref|YP_002943185.1| isoleucyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239800852|gb|ACS17919.1| isoleucyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 949

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 16/159 (10%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDA- 234
           E HP  +  +++  +++   K G++  + SR T +  +   D P Y     I+ VW D+ 
Sbjct: 506 ELHPRTMEILDQAADIVE--KGGIE--AWSRVTAEEILGAEDAPHYTKSTDILEVWFDSG 561

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFS 292
            T Y    G   +P+        ADL++ G D  R  FH+    A  L    P  + + +
Sbjct: 562 STFYHVLRG--THPNVHHESGPEADLYLEGHDQHRGWFHSSLLIACALEGRAPY-RGLLT 618

Query: 293 HGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HGF +  KG K+SKSL N IDP E+  ++G + +R ++ 
Sbjct: 619 HGFTVDAKGIKMSKSLKNGIDPQEISNKLGSEIIRLWVA 657



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K  +     Y N Q H+GHA   I+ D++ +  +L+G D L+  G D HG  I  A +
Sbjct: 56  KFILHDGPPYANGQIHMGHAVNKILKDMITKARQLEGYDALYVPGWDCHGLPIENAIE 113


>gi|238489107|ref|XP_002375791.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus flavus
           NRRL3357]
 gi|220698179|gb|EED54519.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus flavus
           NRRL3357]
          Length = 1077

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 11/236 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 548 KSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYP 607

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMI 369
           DP  ++   G DALR +L+       +    K+   K + A +   + N          +
Sbjct: 608 DPSLIMNRYGSDALRLYLINSPVVRAEPLRFKEAGVKEIVAKVLLPLWNSYKFFEGQVAL 667

Query: 370 LKDYDGM--IPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           LK   G+  +  P A   +    D  IL+ C  +L+ + E M    ++  + +++ L+  
Sbjct: 668 LKKSQGVDYVFDPKAEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLGLIDN 727

Query: 424 VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++       LK  N  D     L    EV+  L   L  F P L + I+  L 
Sbjct: 728 TTNWYIRFNRRRLKGENGVDDTLHALNTLFEVLYTLVRGLAPFTPFLTDTIYQKLL 783


>gi|10177193|dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 988

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++    G L   +G     +PAD+++ G D  R  F +    +       P
Sbjct: 548 MDVWFDSGSSW---AGVLGKREGLS---FPADVYLEGTDQHRGWFQSSLLTSIATQGKAP 601

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
               V +HGF+L  KG K+SKSLGNV+DP  VIE
Sbjct: 602 Y-SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIE 634


>gi|322385895|ref|ZP_08059537.1| isoleucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270074|gb|EFX52992.1| isoleucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 930

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+      +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELQ----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-- 72
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 73  --------------VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                         VD+   +F+ +    D   + ++  T        R+   +++ KG 
Sbjct: 118 VEYLKLCREYALSQVDKQREDFKRLGVSGDWE-NPYVTLTPDYEAAQIRVF-GEMAKKGY 175

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV 141
           IY+G    ++S   E+   + E+
Sbjct: 176 IYRGAKPVYWSWSSESALAEAEI 198


>gi|262340908|ref|YP_003283763.1| leucine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272245|gb|ACY40153.1| leucine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 924

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K YI     YP+ +  HIGH    I +D+ AR+ R +G +VL   G D  G    + A
Sbjct: 29  KQKYYILNMFPYPSGEGLHIGHCLGYIASDIYARYKRAEGYNVLNPIGFDSFGLPAEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G        +NS+ +    + + +S+D
Sbjct: 89  IQTGKHPYETTRKNSQKYIKQMNKIGLSFD 118


>gi|255722089|ref|XP_002545979.1| hypothetical protein CTRG_00760 [Candida tropicalis MYA-3404]
 gi|240136468|gb|EER36021.1| hypothetical protein CTRG_00760 [Candida tropicalis MYA-3404]
          Length = 974

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 22/122 (18%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN-- 283
           M VW D+ T++ T    L+    S+A    AD+++ G D  R  F +      + S N  
Sbjct: 560 MDVWFDSGTSWSTLKSNLEECAESEAPL--ADVYLEGSDQHRGWFQSSLLNKIIYSGNKG 617

Query: 284 ------LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE--------VGVDALRYF 328
                  P  K V +HGFI   KG+K+SKS+GNV  P E IE         +G D LR +
Sbjct: 618 TSFKSVAPF-KTVITHGFITDGKGQKMSKSIGNVFSPKEAIEGCKKPLTPYLGTDGLRLW 676

Query: 329 LV 330
           + 
Sbjct: 677 VA 678


>gi|146318143|ref|YP_001197855.1| isoleucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320330|ref|YP_001200041.1| isoleucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145688949|gb|ABP89455.1| Isoleucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691136|gb|ABP91641.1| Isoleucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292557901|gb|ADE30902.1| Isoleucyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
          Length = 930

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 525 IMDVWFDSGSSWNGVMNAREN------LAYPADLYLEGSDQYRGWFNSSLITSVAVNGHA 578

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L   G K+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 579 PY-KAILSQGFVLDGNGMKMSKSLGNTILPSDVEKQFGAEILRLWVT 624



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-V 73
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K   +
Sbjct: 59  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQVLAKQGVKRKEMDL 118

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     RD A   +D   DDF R            T  + ++  +I ++  ++DKG IY
Sbjct: 119 VEYLEMCRDYAFSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQIRVFGAMADKGYIY 178

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 179 RGAKPVYWSWSSESALAEAEI 199


>gi|125809585|ref|XP_001361180.1| GA17927 [Drosophila pseudoobscura pseudoobscura]
 gi|54636354|gb|EAL25757.1| GA17927 [Drosophila pseudoobscura pseudoobscura]
          Length = 1048

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+V+ H  +   
Sbjct: 595 PDNTKDLQTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEVYLHPMVRDA 649

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 650 HGRKMSKSLGNVIDPMDVILGITLEGLHAQLVGSNLDPREIEKAKAG 696


>gi|325694115|gb|EGD36033.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 930

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 12/108 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           IM VW D+ +++    G + N P+ +    +PADL++ G D  R  F++    +      
Sbjct: 524 IMDVWFDSGSSW---NGVVVNCPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGV 576

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  K++ S GF L  KGEK+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 577 APY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|307205447|gb|EFN83779.1| Isoleucyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 954

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 25/235 (10%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           ADL++ G D  +F   +  + L S  L   P    +F HGF +  K  K+SKS+GNV+DP
Sbjct: 583 ADLYLEGMD--QFRGWFQSSLLTSIALQKRPPYSALFVHGFAVDDKAAKMSKSIGNVVDP 640

Query: 314 IEVIEE----------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            E+I +           GVD LR+++    AC          L +  +  +      L+ 
Sbjct: 641 -EIITKGGENTSKNPTYGVDTLRWWVASH-ACQHTQVPVSTTLLRESHECIQK--LRLIL 696

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI----S 419
           R +  +L  Y   +     +   D+ +L    +  +EI+    + L H A   V+    +
Sbjct: 697 RFLLGVLHSYSAGVSVEPEYLYLDKYMLYALRQYDEEIQRLYDDYLYHHASKLVMHFLAN 756

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            VS V  +    + +  K  +P R + V  VT E +  LA  +   VP LA + +
Sbjct: 757 TVSSVYCHLIKDRLYCDKAASPTRLAAV-EVTRETLTVLARSIAPIVPHLAEEAW 810



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 18/111 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKVFV 73
           Y N +PH+GHA   I+ D+  R   + G  V +  G D HG  I  KA  +      + +
Sbjct: 90  YANGEPHMGHAINKILKDITLRSKIIRGRRVHYVPGWDCHGLPIELKALGDMKNVGALEI 149

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            + +RN+  ++D +    + F+              W  I+D  +   GCY
Sbjct: 150 RRKARNY--VSDAIAKQREVFMS-------------WGAIADWSE--SGCY 183


>gi|254427066|ref|ZP_05040773.1| isoleucyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193235|gb|EDX88194.1| isoleucyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 937

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 12/105 (11%)

Query: 230 VWIDA-LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +T+Y      LD  +  +A   PADL++ G D  R  F +    +  +    P 
Sbjct: 534 VWFDSGVTHYCV----LDQREQLRA---PADLYLEGSDQHRGWFQSSLLTSLAIRDAAPY 586

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              V +HGF + + G K+SKS+GNVI P EV  ++G D LR ++ 
Sbjct: 587 -STVLTHGFTVDEHGRKMSKSVGNVIAPQEVWNDLGADILRLWVC 630



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG        
Sbjct: 48  RPKFILHDGPPYANGDIHIGHAVNKILKDMIVKSRTLAGFDAPYVPGWDCHGLPIELMVE 107

Query: 56  QKIAKAAQNAGVTT 69
           +K+ KA       T
Sbjct: 108 KKVGKAGHKVDAGT 121


>gi|148681125|gb|EDL13072.1| isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 1003

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVF- 72
           Y N  PH+GHA   I+ D+  RFH + G  V F  G D HG  I  K     GV  +   
Sbjct: 150 YANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQSLS 209

Query: 73  ---VDQNSRNFRDMADVLDISYDDFIR 96
              + + +R+F   A  ++     F+R
Sbjct: 210 AMEIREKARSFAQAA--IEKQKSAFVR 234



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 20/118 (16%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++       D           ADL++ GKD L   F +    +    +
Sbjct: 494 QDILDIWFDSGTSWSCVLQVSDTQQR-------ADLYLEGKDQLGGWFQSSLLTSVATRS 546

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  + V  HGF L  KGEK+SKSLGNVI+P  +I            G D LR+++ 
Sbjct: 547 KAPF-RTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRWWIA 603


>gi|323345686|ref|ZP_08085909.1| valine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093800|gb|EFZ36378.1| valine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 878

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 13/107 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------NLPLPKKVFSHGFIL 297
           ++NP+  +  ++ P    V G DI+ F    W A ++ A       +P  K V+  G + 
Sbjct: 474 INNPNNKEINYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRGQMPF-KHVYFTGIVR 528

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            K G K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+
Sbjct: 529 DKLGRKMSKSLGNSPDPLMLIDKYGADGVRMGMMLSAPAGNDILFDE 575


>gi|293977748|ref|YP_003543178.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667679|gb|ADE35314.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 870

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           P+ ++ K++ P    V   DIL F    +    + L    P  K  F+      K  K+S
Sbjct: 475 PNNNEIKYYYPTQNLVTAPDILFFWVTRMIMSGYYLMGTPPFKKIYFTGVVKDKKNIKMS 534

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD-GLKKRVNADLANGIGN 360
           KSLGN  +PI++I++ G DA+R  ++     G D  +D++  LK R   +LAN I N
Sbjct: 535 KSLGNSPNPIDLIDQYGADAVRVGILLSANAGNDLIFDENICLKGR---NLANKIWN 588


>gi|284043001|ref|YP_003393341.1| tRNA synthetase class I (M) [Conexibacter woesei DSM 14684]
 gi|283947222|gb|ADB49966.1| tRNA synthetase class I (M) [Conexibacter woesei DSM 14684]
          Length = 727

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 23/194 (11%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           ++V  H  +   G K+SK LGNV+DP E++  VG D +R  ++   A      +    L+
Sbjct: 533 ERVLMHEMVHLDGRKMSKHLGNVVDPDELLARVGADTVRLAVLYAAAPTNILTWTDQALQ 592

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV-------LQE 400
                 L N  G  + R   +      G +P P    + +E  + +  R+       ++ 
Sbjct: 593 Y-CRRWLVNFWGYALPRIEGV------GEVPEP----DPEEGAVKLRGRLENWRGVAVRR 641

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           I ENM+    HRA   V++LV  + R F+ +   +  +  P   + +    +  I+ LA 
Sbjct: 642 ITENMEGLETHRAARNVMTLVERI-RDFEQRVIRQQGELTPSDTAALQSALLTAIQCLAP 700

Query: 461 LLQAFVPKLANKIF 474
           L     P +A +++
Sbjct: 701 L----APHVAEELW 710



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 37/85 (43%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI  A  + +   H+GH     I+D  ARF R  G  VLF+ G D  G      A    +
Sbjct: 42  YIFAACPFTSGSAHMGHIRSYSISDAYARFLRTRGRAVLFSIGFDAFGLPTEIGAIKNEL 101

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD 92
           T   +V Q     R+  D L  S+D
Sbjct: 102 TPNEWVQQCRVRMREQFDRLGYSFD 126


>gi|264680698|ref|YP_003280608.1| hypothetical protein CtCNB1_4567 [Comamonas testosteroni CNB-2]
 gi|262211215|gb|ACY35313.1| hypothetical protein CtCNB1_4567 [Comamonas testosteroni CNB-2]
          Length = 902

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  KPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
              V    +  +N     +  + M   +D S +  + T +  ++   + L+ K+ +KG  
Sbjct: 92  KNKVPPAKWTYENIAYMKKQMQAMGLAIDWSRE--VATCDPEYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    DG+ +      V+  E  GY+  ++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVI---DGRGWRTG-ALVEKREIPGYYLGITHYAQELLDH 205

Query: 180 YE 181
            +
Sbjct: 206 VQ 207


>gi|310796071|gb|EFQ31532.1| leucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 1116

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
           F+P DL   GKD++  H  ++    L+   P   P+ + ++G ++  GEK+SKS GN + 
Sbjct: 703 FYPLDLRSSGKDLIGNHLTFFLYIHLAMFTPEYWPRGIRTNGHLMLNGEKMSKSTGNFMT 762

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             +V  + G DA R  L        D  +++D
Sbjct: 763 LQDVARKFGADAARIGLADAGDTNGDSNFEED 794


>gi|217976530|ref|YP_002360677.1| leucyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782506|sp|B8EQP4|SYL_METSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217501906|gb|ACK49315.1| leucyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 876

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 15/129 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 629 EKMSKSKRNTVDPDEIIGTFGADTARWFVLSDSPPERDVIWTEEGVQ---------GAAK 679

Query: 361 LVSRSVSMI-----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            V R   +I     L   DG  P P + +    +I     + L  + E++     +RA+A
Sbjct: 680 FVQRLWRLIGELIFLSGADGA-PKPQSISPQAAAIRRAAHQSLIRLEEDLDRLRFNRAVA 738

Query: 416 QVISLVSEV 424
           Q   L +++
Sbjct: 739 QAHDLANKL 747



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 35/89 (39%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKRARGFSVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                   +   N    R     + +S D
Sbjct: 93  QNKSHPAAWTYANIEAMRAQLKSMGLSLD 121


>gi|148828139|ref|YP_001292892.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166200213|sp|A5UIA3|SYI_HAEIG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148719381|gb|ABR00509.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 941

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMVSLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|110833320|ref|YP_692179.1| isoleucyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123345796|sp|Q0VSE1|SYI_ALCBS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110646431|emb|CAL15907.1| Isoleucyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 937

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 12/105 (11%)

Query: 230 VWIDA-LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +T+Y      LD  +  +A   PADL++ G D  R  F +    +  +    P 
Sbjct: 534 VWFDSGVTHYCV----LDQREQLRA---PADLYLEGSDQHRGWFQSSLLTSLAIRDAAPY 586

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              V +HGF + + G K+SKS+GNVI P EV  ++G D LR ++ 
Sbjct: 587 -STVLTHGFTVDEHGRKMSKSVGNVIAPQEVWNDLGADILRLWVC 630



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 48  RPKFILHDGPPYANGDIHIGHAVNKILKDMIVKSRTLAGFDAPYVPGWDCHGLPI 102


>gi|158321221|ref|YP_001513728.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141420|gb|ABW19732.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 1032

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 20/237 (8%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  +    P  K V  +  IL K G K+SKS GN 
Sbjct: 539 ELFPADFICEGIDQTRGWFYSLIAISTFVMGVSPY-KNVLVNDLILDKEGRKMSKSRGNT 597

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN------LVSR 364
           +DP E+ ++ G DALR++L+          +D +GLK+ V +     I N      L + 
Sbjct: 598 VDPFELFDKYGADALRWYLLFVSPAWSPTKFDIEGLKE-VQSKFFTTIQNVYAFFALYAN 656

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           +  + + D+           E D  ILS  + ++ E+   +    + +A+ ++   ++E 
Sbjct: 657 TDEININDF---FIEYKDRPELDRWILSKYNNLIAEVTAELDVYDLTKAVRKIQDFLNED 713

Query: 424 VDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  ++     ++ W  + T+  +A  V   T E++  L+ ++    P +A +++  L
Sbjct: 714 LSNWYIRRARRRFWATELTDDKKA--VYNTTYEILEGLSRMVAPIAPFIAEELYQNL 768


>gi|254193486|ref|ZP_04899920.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169650239|gb|EDS82932.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 967

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARAGTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|295103261|emb|CBL00805.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii SL3/3]
          Length = 849

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRKNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +FR     L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKSNVDHFRSQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           YK   +  +    +    ++EV  G   +  +   + V  QWM       +++AY DKL+
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWM------LKITAYADKLI 202



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKSLGNVI+P EV+++ G D +R +
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLY 650


>gi|281207015|gb|EFA81199.1| hypothetical protein PPL_06036 [Polysphondylium pallidum PN500]
          Length = 1019

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 16/135 (11%)

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------A 253
           ++S +K+ +L+R +F       +  + ++  W  +    ++  G+   P  +K      +
Sbjct: 537 MESAMKEYNLARDSFTL-----ERDEDVLDTWFSSGLFPISALGW---PSQNKDTVVDLS 588

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVI 311
           KF+P D+   G DIL F          +     P K +  H  I   +G K+SKSLGNVI
Sbjct: 589 KFYPLDVMETGSDILFFWVARMVMMCTAITGVAPFKTILLHPLIRDSQGRKMSKSLGNVI 648

Query: 312 DPIEVIEEVGVDALR 326
           DP+ VI  V ++ L+
Sbjct: 649 DPLHVINGVSLEQLK 663



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 11/64 (17%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA    I D L RF R+ G + L+  G D           ++G+ T+V V++  ++ 
Sbjct: 121 HIGHALTTTIEDALVRFKRMSGYETLWIPGLD-----------HSGIATQVVVEKELKSK 169

Query: 81  RDMA 84
           +++ 
Sbjct: 170 QNLT 173


>gi|253751328|ref|YP_003024469.1| isoleucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753229|ref|YP_003026369.1| isoleucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755052|ref|YP_003028192.1| isoleucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251815617|emb|CAZ51203.1| isoleucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817516|emb|CAZ55260.1| isoleucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819474|emb|CAR44998.1| isoleucyl-tRNA synthetase [Streptococcus suis P1/7]
          Length = 929

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       +N        +PADL++ G D  R  F++    +  ++ + 
Sbjct: 524 IMDVWFDSGSSWNGVMNAREN------LAYPADLYLEGSDQYRGWFNSSLITSVAVNGHA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + S GF+L   G K+SKSLGN I P +V ++ G + LR ++ 
Sbjct: 578 PY-KAILSQGFVLDGNGMKMSKSLGNTILPSDVEKQFGAEILRLWVT 623



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF-V 73
           Y N   H+GHA   I  D++ R   + G    F  G D HG  I +     GV  K   +
Sbjct: 58  YANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQVLAKQGVKRKEMDL 117

Query: 74  DQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGDIY 120
            +     RD A   +D   DDF R            T  + ++  +I ++  ++DKG IY
Sbjct: 118 VEYLEMCRDYAFSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQIRVFGAMADKGYIY 177

Query: 121 KGCYSGWYSLRDEAYYNDDEV 141
           +G    ++S   E+   + E+
Sbjct: 178 RGAKPVYWSWSSESALAEAEI 198


>gi|255075635|ref|XP_002501492.1| predicted protein [Micromonas sp. RCC299]
 gi|226516756|gb|ACO62750.1| predicted protein [Micromonas sp. RCC299]
          Length = 1093

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 255 FW-PADLHVIGKDILRFH---AIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
           FW P DL V GKD+++ H   AIY   A         P+   ++G +L  GEK+SKS GN
Sbjct: 665 FWYPFDLRVSGKDLIQNHLTFAIYNHTAIWEGDESKWPRGFRTNGHLLLNGEKMSKSTGN 724

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                  IEE   DA+R+ L    A   DG  D + +    NA +
Sbjct: 725 FKTLKTAIEEYSADAMRFAL----ADAGDGIEDANFVHDTANAAI 765


>gi|145603153|ref|XP_361951.2| hypothetical protein MGG_04396 [Magnaporthe oryzae 70-15]
 gi|145011453|gb|EDJ96109.1| hypothetical protein MGG_04396 [Magnaporthe oryzae 70-15]
          Length = 1099

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +       K +P      G DIL F    W A ++   + L
Sbjct: 616 VLDTWFSSGLWPFSTLGWPNTSAEDLQKLYPTSTLETGWDILTF----WIARMIMLGMKL 671

Query: 287 PKKV-----FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             KV     + H  +    G K+SKSLGNVIDP++VI+ + +D L   L+
Sbjct: 672 TGKVPFNEVYCHSLVRDSDGRKMSKSLGNVIDPLDVIKGINLDDLHAKLL 721


>gi|58578735|ref|YP_196947.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417361|emb|CAI26565.1| Valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 812

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 18/231 (7%)

Query: 257 PADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PA L     +I+R  A Y    A+    ++P    + S   +     K+SKS GN + P 
Sbjct: 489 PASLRAQSHEIIRSWAFYTILQAYYHHNSIPWENIMVSGWCLAADKSKMSKSKGNALIPN 548

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKD 372
           ++++E G D +RY+       G D  +  + L+  KR+   L N      S+ VSM +  
Sbjct: 549 QLLQEYGADVIRYWAANS-RLGSDTVFSDEVLQLGKRLVTKLWNA-----SKFVSMFVS- 601

Query: 373 YDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
               IP     TE+ D+ +L+   +V+ +  E+        AL  + S   +   D Y +
Sbjct: 602 -QCQIPDLNCVTETMDKWVLTKLYKVIVKATESFNVFEYCVALDYIESFFWKDFCDNYLE 660

Query: 430 --AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++ +    TN +  S V  ++  V+  L  +L  F+P +  +I+  L+
Sbjct: 661 LVKKRAYGESVTNKENLSAVNTLSF-VLMALLKMLAPFMPYITEEIYSTLY 710



 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------QKIAK--AAQNAGV 67
           + Q HIGH +     D +AR+ R+ G DVL+  G D++G       +KI K  AA     
Sbjct: 50  SGQLHIGHVFSYCHTDFIARYQRMLGKDVLYPIGFDDNGLPTERLVEKIKKVRAADIDRK 109

Query: 68  TTKVFVDQNSRNFRD----MADVLDISYD 92
             K   ++ S  FR     +   L ISYD
Sbjct: 110 EFKALCNEVSAKFRMEFKILFQSLGISYD 138


>gi|326568083|gb|EGE18167.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 878

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI--GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           L  T Y  N DGS   ++P ++  +  G +I              A L    K  + G I
Sbjct: 584 LAGTYYRSNSDGSTTYYFPHEIDFVMNGTEIE------------GATLKADGKPVTIGKI 631

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               EK+SKS  N +DP E+IE+ G D +R + +
Sbjct: 632 ----EKMSKSKNNGVDPQEIIEQYGADTVRLYTL 661


>gi|317137866|ref|XP_001727511.2| isoleucyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 1092

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 11/236 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 563 KSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYP 622

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMI 369
           DP  ++   G DALR +L+       +    K+   K + A +   + N          +
Sbjct: 623 DPSLIMNRYGSDALRLYLINSPVVRAEPLRFKEAGVKEIVAKVLLPLWNSYKFFEGQVAL 682

Query: 370 LKDYDGM--IPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           LK   G+  +  P A   +    D  IL+ C  +L+ + E M    ++  + +++ L+  
Sbjct: 683 LKKSQGVDYVFDPKAEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLGLIDN 742

Query: 424 VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++       LK  N  D     L    EV+  L   L  F P L + I+  L 
Sbjct: 743 TTNWYIRFNRRRLKGENGVDDTLHALNTLFEVLYTLVRGLAPFTPFLTDTIYQKLL 798


>gi|312130827|ref|YP_003998167.1| isoleucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907373|gb|ADQ17814.1| Isoleucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 1147

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           K +PAD    G D  R  F  ++  A +L  ++   K V S G +L K G K+SK LGN 
Sbjct: 638 KAFPADFISEGVDQTRGWFFTLHAIAGMLFDSVAF-KNVVSTGLVLDKNGNKMSKRLGNG 696

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN------LVSR 364
           IDP + + + G D  R++++       +  ++ DG+++ V   L   + N      L + 
Sbjct: 697 IDPFDTLAKYGADPTRWYMITNAEPWDNLRFNLDGVQE-VQRKLFGTLTNTYNFFALYAN 755

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             +  ++ +D  +P   A T+ D  I+S    +++E+ E   N
Sbjct: 756 LDNYTIEQFD-RVPKE-ALTQMDRWIVSKIYTLVKEVTEEFDN 796



 Score = 43.9 bits (102), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTT-----K 70
           N  P I H     I D+  R+  L G  V    G D HG  +  +  +  G+T      K
Sbjct: 61  NGTPGIHHVMARTIKDIFCRYKTLRGYQVNRKAGWDTHGLPVELQVEKELGITKEDIGKK 120

Query: 71  VFVDQNSRN-----------FRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           + V++ +R            +RDM D +   +  D+   T E ++ ++   L KK+ DKG
Sbjct: 121 ISVEEYNRKCREAVMRFTGIWRDMTDKMGYWVDMDNPYITYESKYIESVWNLLKKLHDKG 180

Query: 118 DIYKG 122
            +YKG
Sbjct: 181 LLYKG 185


>gi|283954655|ref|ZP_06372173.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793847|gb|EFC32598.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 688

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+  ++ D ++
Sbjct: 445 RLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE 503


>gi|312194557|ref|YP_004014618.1| leucyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225893|gb|ADP78748.1| leucyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 997

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 3/119 (2%)

Query: 1   MKEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K  +  ++     YP+ A  H+GH    I  DV AR+ R+ G  VL + G D  G    
Sbjct: 65  VKGLDPFFVLDMFPYPSGAGLHVGHPLGYIGTDVYARYLRMTGRHVLHSFGYDAFGLPAE 124

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDK 116
           + A N G   +V  + N  N R     L + +D    I TT+  ++   + ++KKI D 
Sbjct: 125 QYAINTGQHPRVTTEANIANMRRQLGRLGLGHDTRREIATTDVTYYRWTQWIFKKIFDS 183


>gi|258648502|ref|ZP_05735971.1| valine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851267|gb|EEX71136.1| valine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 893

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 45/272 (16%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLL 280
           D  +  ++W  +L N ++      +P+  + +++   ADL V G DI+ F    W A ++
Sbjct: 473 DTWFSSWLWPISLFNGIS------DPNNEEFRYYYPTADL-VTGPDIIFF----WVARMI 521

Query: 281 SAN------LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            A       +P  K V+  G +  K G K+SKSLGN  DP+ +I+  G D +R  L+   
Sbjct: 522 MAGYEYTGKMPF-KHVYFTGIVRDKLGRKMSKSLGNSPDPLALIDSFGADGVRMGLMLAA 580

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL-- 391
             G D  YD    ++  N    N I N      S+ + D        GA  ++    L  
Sbjct: 581 PAGNDILYDDSLCEQGRN--FCNKIWNCFRLIDSLEVSD--------GAQPQTARRALDW 630

Query: 392 --SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
             +   +   EI +      +  AL ++  L++      D    W L+ T P     +  
Sbjct: 631 FGAQLRKSAAEIADLFTKYRLSEALMEIYRLIT------DEFSGWLLEMTKPAYGEPIDR 684

Query: 450 VTVEVIRQ----LAILLQAFVPKLANKIFDIL 477
            T+  ++     L  LL  F+P +  +++  L
Sbjct: 685 RTINEVKAYFNDLLHLLHPFMPFITEELWQHL 716


>gi|51473609|ref|YP_067366.1| leucyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|60390688|sp|Q68WV8|SYL_RICTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51459921|gb|AAU03884.1| Leucine translase [Rickettsia typhi str. Wilmington]
          Length = 828

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 38/89 (42%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+   + YP+ + HIGH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 26  KPKYYVLEMLPYPSGKIHIGHIRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAAI 85

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                 + +   N    +     +  SYD
Sbjct: 86  QNNSRPQDWTYSNIEYMKKQLQSMGFSYD 114


>gi|145571595|gb|ABP80701.1| valyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 897

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 46/204 (22%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W+ ++ ++       +K ++  ES     +P +  N   S+++  ++D  +SR+ + WG 
Sbjct: 327 WLTDQ-WYVSTKPLAEKAIAAVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQLW-WGH 383

Query: 219 KIPD--DPQYIMYV----------------------------WIDALTNYLTTTGYLDNP 248
           +IP   D    +YV                            W  +     +T G+    
Sbjct: 384 RIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSGLWTFSTLGWPQQT 443

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGE 301
           +  K  F P D+ V G DI+     +W A +      L+  +P  K V+ HG +   +G+
Sbjct: 444 EFLKT-FHPTDVLVTGFDII----FFWVARMIMLSTHLTGQIPF-KTVYVHGLVRDGQGQ 497

Query: 302 KISKSLGNVIDPIEVIEEVGVDAL 325
           K+SKS GNV+DP+++++ + +D L
Sbjct: 498 KMSKSKGNVLDPLDIVDGITLDEL 521


>gi|145640631|ref|ZP_01796214.1| isoleucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274557|gb|EDK14420.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 941

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKHDLVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++      +EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQKEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|118469201|ref|YP_891113.1| leucyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|189030291|sp|A0R7H5|SYL_MYCS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118170488|gb|ABK71384.1| leucyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 953

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++     YP+    H+GH    I  DV AR++R+ G +VL   G D  G    + A 
Sbjct: 62  DKMFVQDMFPYPSGDGLHVGHPLGYIATDVYARYYRMLGRNVLHALGFDAFGLPAEQYAV 121

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  NFR     L + +D
Sbjct: 122 QTGTHPRTRTEANIVNFRRQLGRLGLGHD 150


>gi|530407|emb|CAA83690.1| Leu-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 132

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +K Y+     YP+ A  H+GH       DV +RF R+ G DVL   G D  G    + A
Sbjct: 29  HKKAYVLDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              G   + F  +N  NF+     +  SYD
Sbjct: 89  LKTGNDPRDFTLKNIENFKAQLVKMGFSYD 118


>gi|73748800|ref|YP_308039.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|84029515|sp|Q3ZY20|SYI_DEHSC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|73660516|emb|CAI83123.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 1014

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 17/275 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILR--FHAIYWPAFLL 280
           +M  W D+    +    Y   P+     S  +F PAD      D  R  F++++  + L+
Sbjct: 548 VMDCWYDSGAMPVAQYHYPFEPESRTIASDGRF-PADYICEAVDQTRGWFYSLHAISTLI 606

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               P  + V   G IL  +GEK+SKS  NVI P  V+++ G DA+R++       G   
Sbjct: 607 FGR-PCYQNVICLGHILDERGEKMSKSKNNVIQPAAVLDKYGADAVRWYFYTAAPPGNAR 665

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCS 395
            +  + L   V       + N+ S  V+    + D   P+     G   E D  ILS  +
Sbjct: 666 RFS-EKLVGEVTRQFLLMLWNIYSFFVT--YANIDNFTPSEKYLAGEVPELDRWILSELN 722

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EV 454
           +++ ++ + + N    +A  ++   V  +  ++  +      K+  D      Y  +   
Sbjct: 723 QLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSENDADKLSAYQALYTC 782

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +  L+ LL  F P +A +++  L +  +    +S+
Sbjct: 783 LVTLSKLLAPFTPFVAEELYQNLVLLVDQSALESV 817


>gi|86143832|ref|ZP_01062208.1| leucyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85829875|gb|EAQ48337.1| leucyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 944

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+ A  H+GH    I +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHQGFNVLHPQGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G    +  + N   +R+  D +  S+D
Sbjct: 89  AIQTGQHPAITTETNIARYREQLDKIGFSFD 119


>gi|326572553|gb|EGE22542.1| leucyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 878

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227


>gi|326568501|gb|EGE18573.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 878

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227



 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI--GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           L  T Y  N DGS   ++P ++  +  G +I              A L    K  + G I
Sbjct: 584 LAGTYYRSNSDGSTTYYFPHEIDFVMNGTEIE------------GATLKADGKPVTIGKI 631

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               EK+SKS  N +DP E+IE+ G D +R + +
Sbjct: 632 ----EKMSKSKNNGVDPQEIIEQYGADTVRLYTL 661


>gi|303237347|ref|ZP_07323917.1| isoleucine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482734|gb|EFL45759.1| isoleucine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 1222

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNV 
Sbjct: 727 FYPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHVGNVT 785

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           +P E++E+ G D +R++++       +  +D +G+
Sbjct: 786 NPFEMMEKYGADPVRFYMMTNSEPWDNLKFDPEGV 820


>gi|322435106|ref|YP_004217318.1| isoleucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162833|gb|ADW68538.1| isoleucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 1000

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 38/250 (15%)

Query: 249 DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISK 305
           D  ++  +PADL+  G D  R  FH+    +  L    P  + V + G+ L  +G   SK
Sbjct: 598 DAEESLRFPADLYTEGGDQHRGWFHSSLLTSVALRGVAPY-RMVATSGWTLDEQGRAFSK 656

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLV----REIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           SLGN +DP++V + +G + +R ++     RE     +    + G   R    L N +  L
Sbjct: 657 SLGNGVDPVDVAKRLGAEIIRLWVASVDFREDVAASENLMQRVGDNYR---KLRNTLKFL 713

Query: 362 VSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +       L D+D   P   A       + D+ IL+  + ++ +IR+       HRA   
Sbjct: 714 LGN-----LHDFD---PAKDALPFADLEQLDQYILAQTAELVAKIRKAYDEFEFHRAYHA 765

Query: 417 VISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLYVTVE-VIRQLAILLQ------ 463
           +   V+      Y D  K   +     +P+R  A T L+   E ++R +A +L       
Sbjct: 766 LNEFVNTDLSALYLDVLKDRLYTFAPDHPERRSAQTALWRIAEALVRLIAPILSFTADEA 825

Query: 464 -AFVPKLANK 472
            AF+PK+  +
Sbjct: 826 WAFLPKVEGR 835


>gi|254786695|ref|YP_003074124.1| valyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237684476|gb|ACR11740.1| valine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 922

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 47/232 (20%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           ++ R     +K ++  E      +P +  N   S+++  ++D  +SR+ + WG +IP   
Sbjct: 356 WYVRTQPLAEKAIAAVEDGDIAFVPKQYENMYFSWMRD-IQDWCISRQLW-WGHRIPAWY 413

Query: 222 DDPQYI---------------------------MYVWIDALTNYLTTTGYLDNPDGSKAK 254
           DD   +                           +  W  +      T G+ +  D  K  
Sbjct: 414 DDAGQVYVGRDEADVRKKYNLGDSLALKQDDDVLDTWFSSGLWTFGTLGWPEETDFLKT- 472

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F P+ + V G DI+ F    W A ++   L   K++  H   +H      +G+K+SKS G
Sbjct: 473 FHPSSVLVTGFDIIFF----WVARMIMLTLYFKKEIPFHTVYVHGLVRDSQGQKMSKSKG 528

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           NV+DPI++I+ + +++    LV++   G     D   ++K    +  +G+ +
Sbjct: 529 NVLDPIDLIDGIDLES----LVKKRTTGLMNPKDAAKIEKNTRKEFPDGLAS 576



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 26/135 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GH ++  I D L R+HR+ G + L+  GTD           +AG+ T++ V++     
Sbjct: 47  HMGHGFQESIMDALIRYHRMKGCNTLWQVGTD-----------HAGIATQMVVER----L 91

Query: 81  RDMADVL--DISYDDFI-RTTEKRHHDTCRIL--WKKISDKGDIYKGCYS---GWYSLRD 132
            D  ++   D+  D FI +  E + H    I    +++    D  +  ++   G+Y    
Sbjct: 92  LDAENITRHDLGRDKFIEKVWEWKEHSGGTITRQLRRLGASPDWSRERFTMDEGFYQAVQ 151

Query: 133 EAY---YNDDEVYKG 144
           E +   Y+D  +Y+G
Sbjct: 152 EVFIRLYDDKLIYRG 166


>gi|212223287|ref|YP_002306523.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|226695265|sp|B6YST9|SYL_THEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|212008244|gb|ACJ15626.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 967

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 6  KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          K YI+ A  Y +   H+GHA    I DV+ARF R+ G +VLF       G  I   A+ 
Sbjct: 35 KFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGAPIVGIAER 93



 Score = 40.4 bits (93), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           ++P D     KD++  H      F +  ++ +      P+ +  +GF   +G+K+SKS G
Sbjct: 601 WYPLDWRCSAKDLIPNHL----TFFIFNHVAIFRKGHWPRGIAVNGFGTLEGQKMSKSKG 656

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           NV++ I+ IEE G D +R +++
Sbjct: 657 NVLNFIDAIEENGADVVRLYIM 678


>gi|195333986|ref|XP_002033667.1| GM21449 [Drosophila sechellia]
 gi|194125637|gb|EDW47680.1| GM21449 [Drosophila sechellia]
          Length = 1049

 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  K+++ H  +   
Sbjct: 596 PDQTKDLQTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-KEIYLHPMVRDA 650

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI  + ++ L   LV      REI   K G
Sbjct: 651 HGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPREIEKAKAG 697


>gi|320535205|ref|ZP_08035331.1| isoleucine--tRNA ligase [Treponema phagedenis F0421]
 gi|320147943|gb|EFW39433.1| isoleucine--tRNA ligase [Treponema phagedenis F0421]
          Length = 1086

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 27/243 (11%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVID 312
           PAD    G D  R    ++   +L+A L   P  +     G +L   G+K+SKSL N  D
Sbjct: 572 PADFISEGLDQTR--GWFYTLTVLAAALFDKPAFQNCVVTGLVLAADGKKMSKSLRNYTD 629

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           P  V+ E G DALR FL+       D   Y  +G++  + + L   I    S S  +   
Sbjct: 630 PNTVVNEFGADALRLFLMHSSVVKADDLKYSDEGVRDVLKSIL---IPLWNSYSFYVTYA 686

Query: 372 DYDGMIPTPGAFTES----------------DESILSVCSRVLQEIRENMQNQLIHRALA 415
           + D + P   A  +                 D  ILS+  +++ ++   M    + +A+ 
Sbjct: 687 NIDKVTPPAHAKLDGKDKGIKEFLSHVTNPLDRWILSITEKLVFDVTAAMDAYDLSKAID 746

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIF 474
            ++S + +++ ++  +      K+  D      Y T+   I++  ++    VP +   I+
Sbjct: 747 PIVSYIDQLNNWYIRRSRRRFWKSENDGDKAQAYETLYRAIKKFTLVAAPVVPFITETIW 806

Query: 475 DIL 477
             L
Sbjct: 807 QNL 809


>gi|281335130|gb|ADA62214.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
          Length = 1024

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 51/245 (20%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD    G D  R  F+++   + +L       K+  S G IL   G+K+SKS GNVI+
Sbjct: 537 FPADFIAEGVDQTRGWFYSLLVISTILKGKSSY-KRALSLGHILDSNGKKMSKSKGNVIN 595

Query: 313 PIEVIEEVGVDALRYFLVRE-------------IACGKDGFYDK-DGLKKRVNADLANGI 358
           P E+I + G D+LR+ L+ +             +A  K  F D  D + K  N  + N I
Sbjct: 596 PTELINKYGADSLRWALISDSAPWNNKRFSENIVAQTKSKFIDTLDNIYKFYN--MYNKI 653

Query: 359 -----GNLVSRSVSMI----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 N +++S + +    L   + +I     +  + +   +  +R++ E    + N  
Sbjct: 654 DHYNPNNEITKSRNTLDNWALSRLNTLIKESNIYVNNYD--FTSAARLINEYTNTISNWY 711

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPK 468
           I R+  +                 WE   +N  + A   LY   E++  L+ L+  FVP 
Sbjct: 712 IRRSRGRF----------------WEQGISNDKKDAYNTLY---EILTTLSRLVAPFVPF 752

Query: 469 LANKI 473
           ++ KI
Sbjct: 753 ISEKI 757


>gi|158256300|dbj|BAF84121.1| unnamed protein product [Homo sapiens]
          Length = 940

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 25/44 (56%)

Query: 15 YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          Y N  PH+GHA   I+ D+  RFH ++G  + F  G D HG  I
Sbjct: 45 YANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPI 88



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 27/129 (20%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 522 QDILDIWFDSGTSW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 572

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV-- 330
             P  K V  HGF L  KGEK+SKSLGNVI P  V+            G D LR+++   
Sbjct: 573 RAPY-KTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWVADS 631

Query: 331 ---REIACG 336
               E+A G
Sbjct: 632 NVFTEVAIG 640


>gi|330835309|ref|YP_004410037.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329567448|gb|AEB95553.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 939

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 255 FWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    G+D+++ H    IY    +   NL +P+++  +GF+   G+K+SKS  N+ 
Sbjct: 572 WYPLDSRHSGRDLVQNHLPYMIYNHLAIFGENL-VPRRIVVNGFVRVGGKKMSKSFRNIY 630

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-----RVNADLANGIGNLVS 363
              + IEE GVD +R  L       +D  +D   +K      R   DLA  +  L S
Sbjct: 631 PLYKAIEEYGVDPVRLALTVSSELSEDTDFDTSSIKAITDQLRRMYDLAVNVSKLKS 687



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 28/141 (19%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFT-----TGT-----DE 53
           ++K +I+ A  Y N+  HIGH    + AD++AR+ R+ G +VLF      TGT      E
Sbjct: 31  KDKYFITVAFPYTNSPLHIGHGRTYVTADIVARYQRMIGKNVLFPFAFQFTGTPILSISE 90

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRD--------------MADVLDISYD---DFIR 96
             ++  K   N   T     ++  + F+D              MA  L +S D   +F  
Sbjct: 91  AIKRGDKDIINDFFTLYKIDEEKIKEFQDPLKLAQYFKEDMERMARALGLSVDWRREFT- 149

Query: 97  TTEKRHHDTCRILWKKISDKG 117
           T + R     R  +K++ DKG
Sbjct: 150 TVDPRFEQFIRWQFKRLRDKG 170


>gi|302838408|ref|XP_002950762.1| hypothetical protein VOLCADRAFT_60821 [Volvox carteri f.
           nagariensis]
 gi|300263879|gb|EFJ48077.1| hypothetical protein VOLCADRAFT_60821 [Volvox carteri f.
           nagariensis]
          Length = 983

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 12/78 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL F    W A +      L+  +P  K+V+ H  +    G K+SKSL
Sbjct: 525 FYPTSLLETGHDILFF----WVARMVMMGIQLTGQVPF-KQVYLHAMVRDAHGRKMSKSL 579

Query: 308 GNVIDPIEVIEEVGVDAL 325
           GNVIDP+ VIE + ++ L
Sbjct: 580 GNVIDPLHVIEGISLEGL 597


>gi|269955925|ref|YP_003325714.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304606|gb|ACZ30156.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 916

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 6/126 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q IM  W  +       +G+  + D  + + +P DL   G+DI+R    +    + L   
Sbjct: 537 QDIMDTWATSSLTPQIVSGWERDADLFE-RIYPMDLRPQGQDIIRTWLFSTVVRSHLEHG 595

Query: 283 NLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            LP      S G+IL    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  Y
Sbjct: 596 VLPWANASIS-GWILDPDRKKMSKSKGNVVTPLGLLEQHGSDAVRYWAA-SARLGTDAAY 653

Query: 342 DKDGLK 347
           D+  +K
Sbjct: 654 DEGQMK 659



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K RE++Y I T     +   HIGH +     D++ARF R+ GL+V +  G D++G    +
Sbjct: 60  KTREQVYSIDTPPPTASGSLHIGHVFSYTHTDLVARFKRMRGLEVFYPMGWDDNGLPTER 119

Query: 61  AAQN 64
             QN
Sbjct: 120 RVQN 123


>gi|254447166|ref|ZP_05060633.1| valyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263305|gb|EDY87583.1| valyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 968

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 48/200 (24%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222
           +F R        +   ES     +P + +N   S+++  ++D  +SR+ + WG +IP   
Sbjct: 403 WFVRAEPLAKPAIEAVESGRIRFVPEQYQNMFFSWMRD-IQDWCISRQLW-WGHRIPAWY 460

Query: 223 DPQYIMYV----------------------------WIDALTNYLTTTGYLDNPDGSKA- 253
           D Q  +YV                            W  +     +T G+   PD + A 
Sbjct: 461 DEQGGVYVGHSEAEVRREHGLSDDIALQQDDDVLDTWFSSALWPFSTLGW---PDQTAAL 517

Query: 254 -KFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLP-KKVFSHGFIL-HKGEKISK 305
            K++P  + V G DI+ F    W A ++   L      +P K V+  G +    G+K+SK
Sbjct: 518 EKWYPTSVLVTGFDIIFF----WVARMMMMGLHFMDGEVPFKDVYITGLVRDENGDKMSK 573

Query: 306 SLGNVIDPIEVIEEVGVDAL 325
           S GNV+DP+++I+ + +DAL
Sbjct: 574 SKGNVLDPLDLIDGIDLDAL 593



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA++  I D L R++R+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 71  HMGHAFQQTIMDALTRYYRMKGHNTLWQPGTD-----------HAGIATQMVVERQ 115


>gi|160946011|ref|ZP_02093237.1| hypothetical protein FAEPRAM212_03544 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443742|gb|EDP20747.1| hypothetical protein FAEPRAM212_03544 [Faecalibacterium prausnitzii
           M21/2]
          Length = 849

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ A  H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRKNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +FR     L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKSNVDHFRSQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--QWMEEEGYFFRLSAYQDKLL 177
           YK   +  +    +    ++EV  G   +  +   + V  QWM       +++AY DKL+
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWM------LKITAYADKLI 202



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYF 328
           K+SKSLGNVI+P EV+++ G D +R +
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLY 650


>gi|25029404|ref|NP_739458.1| leucyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259508416|ref|ZP_05751316.1| leucine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|29336540|sp|Q8FLM0|SYL_COREF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|23494692|dbj|BAC19658.1| putative leucyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259163970|gb|EEW48524.1| leucine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 957

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 61  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAI 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 121 QTGTHPRTTTMANIENMKRQLGALGLGHD 149


>gi|119356387|ref|YP_911031.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166231596|sp|A1BDY0|SYL_CHLPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119353736|gb|ABL64607.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 816

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIVARYKRSCGYNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           A   G   K   ++N  +FR+    +  SYD
Sbjct: 89  AIKTGTHPKNTTEKNISSFRETLQAMGFSYD 119



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 11/90 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL-----LSANLPLPKKVFSHGFILHK 299
           D +K K+W   DL++ G +    H +Y   W   L     +S+  P  KK+F+ G IL +
Sbjct: 514 DPAKEKYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVSSREPF-KKLFNQGMILGE 572

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
             EK+SKS GNVI   +V+++ G DA+R +
Sbjct: 573 DNEKMSKSRGNVIPADQVLKDYGADAVRLY 602


>gi|289192519|ref|YP_003458460.1| leucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938969|gb|ADC69724.1| leucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 941

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 32/61 (52%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          EREK +I+ A  Y N   H GH     I +V+ARF R+   +VL+T G    G  I   A
Sbjct: 29 EREKFFITAAFPYLNGVLHAGHLRTFTIPEVVARFQRMKNKNVLWTFGYHVTGTPILGLA 88

Query: 63 Q 63
          +
Sbjct: 89 E 89



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 34/230 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D     KD++  H  ++  F   A  P    P+ +  +G++  +G+K+SKS G V+
Sbjct: 583 YYPVDWRCSAKDLIPNHLTFY-IFNHVAIFPEEFWPRGIVVNGYVTIEGKKLSKSKGPVL 641

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDG---FYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             +EV E+ G D  R+++       +D    F + +  KK             V   + +
Sbjct: 642 PVLEVAEKFGADVGRFYITTCAELPQDADIKFKEMENTKK-------------VLERLYL 688

Query: 369 ILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             K+        G      D+ +LS   R +++  E M+N  + +A   +  L+ ++  Y
Sbjct: 689 FAKEIAERKEEKGNELNYIDKWLLSRLYRAVKQYDEYMENFELRKAGILLYQLLDDLKWY 748

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                          R    + V  E +  L  L+  F P +  ++++IL
Sbjct: 749 -------------RRRGGNNIRVLEEFLEVLIKLMAPFTPHICEEMWEIL 785


>gi|289582941|ref|YP_003481407.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289532494|gb|ADD06845.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 971

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 83/226 (36%), Gaps = 41/226 (18%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  AR+ RL G DVL   G D  G     AA     
Sbjct: 35  YVLGMFPYTSGTLHMGHVRNYAITDAYARYRRLRGDDVLHPMGWDAFGLPAENAAYERAS 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI-YKGCY 124
             + +     R  R+  + L   YD    I T E  ++   + L+K+  + G + + G  
Sbjct: 95  DPESWTRACIRRMREELETLGFGYDWSREITTCEPSYYRWNQWLFKRFHEAGLVEFTGAT 154

Query: 125 SGW----------------------YSLRDEAYYNDDEVYKGADGQYYNA---QHN---- 155
             W                       +  DEA  N D      D    NA   +H+    
Sbjct: 155 VNWCPDCETVLADAQVAVDEGGQAVTATADEAGDNGDSAGGAHDESNGNAHVHEHSTARV 214

Query: 156 ------PVQWMEEEGYFFRLSAYQDKL---LSYYESHPEFILPIER 192
                 PV+  E + +FF ++ Y D+L   L   +  PE +  I+R
Sbjct: 215 CWRCGTPVEQRELDQWFFTITDYADELVDGLDDLDQWPEGVREIQR 260



 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 14/91 (15%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLP--------KKVFSHGFILHK 299
           D   A  W P D++V G +    H +Y   F+  A   L         +++ S G +L++
Sbjct: 567 DTELANEWLPVDVYVGGDEHAILHLLY-IRFVTRALADLGFLDQREPVERLVSQGTVLYE 625

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           GEK+S S GNV+ P    +E G +  R F++
Sbjct: 626 GEKMSSSSGNVVTP----DEYGAETTRLFVL 652


>gi|161833636|ref|YP_001597832.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|158633137|gb|ABS30434.2| valyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 870

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           P+ ++ K++ P    V   DIL F    +    + L    P  K  F+      K  K+S
Sbjct: 475 PNNNEIKYYYPTQNLVTAPDILFFWVTRMIMSGYYLMGTPPFKKIYFTGVVKDKKNIKMS 534

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD-GLKKRVNADLANGIGN 360
           KSLGN  +PI++I++ G DA+R  ++     G D  +D++  LK R   +LAN I N
Sbjct: 535 KSLGNSPNPIDLIDQYGADAVRVGILLSANAGNDLIFDENICLKGR---NLANKIWN 588


>gi|156043451|ref|XP_001588282.1| hypothetical protein SS1G_10729 [Sclerotinia sclerotiorum 1980]
 gi|154695116|gb|EDN94854.1| hypothetical protein SS1G_10729 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1046

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P DL V GKD++  H  ++    ++   P   PK V ++G +L  GEK+SKS GN + 
Sbjct: 625 WYPLDLRVSGKDLIPNHLTFFLYIHIAIFPPEYWPKGVRANGHLLLNGEKMSKSTGNFMT 684

Query: 313 PIEVIEEVGVDALRYFLV 330
             ++I + G DA R  L 
Sbjct: 685 LSDMINKYGADASRIALA 702


>gi|87159883|ref|YP_492689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|242241777|ref|ZP_04796222.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251809763|ref|ZP_04824236.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281427748|ref|YP_003347951.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|293367342|ref|ZP_06614005.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|87125857|gb|ABD22976.1| Isoleucyl-tRNA synthetase, mupirocin resistant protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|242234768|gb|EES37079.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251806703|gb|EES59360.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|270299928|gb|ACZ68734.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281307462|gb|ADA57909.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281334993|gb|ADA62077.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281335063|gb|ADA62147.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281336260|gb|ADA62809.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|291318532|gb|EFE58915.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|316994942|gb|ADU79024.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|316994945|gb|ADU79026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|316994948|gb|ADU79028.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|316994951|gb|ADU79030.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
          Length = 1024

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 51/245 (20%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD    G D  R  F+++   + +L       K+  S G IL   G+K+SKS GNVI+
Sbjct: 537 FPADFIAEGVDQTRGWFYSLLVISTILKGKSSY-KRALSLGHILDSNGKKMSKSKGNVIN 595

Query: 313 PIEVIEEVGVDALRYFLVRE-------------IACGKDGFYDK-DGLKKRVNADLANGI 358
           P E+I + G D+LR+ L+ +             +A  K  F D  D + K  N  + N I
Sbjct: 596 PTELINKYGADSLRWALISDSAPWNNKRFSENIVAQTKSKFIDTLDNIYKFYN--MYNKI 653

Query: 359 -----GNLVSRSVSMI----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 N +++S + +    L   + +I     +  + +   +  +R++ E    + N  
Sbjct: 654 DHYNPNNEITKSRNTLDNWALSRLNTLIKESNIYVNNYD--FTSAARLINEYTNTISNWY 711

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPK 468
           I R+  +                 WE   +N  + A   LY   E++  L+ L+  FVP 
Sbjct: 712 IRRSRGRF----------------WEQGISNDKKDAYNTLY---EILTTLSRLVAPFVPF 752

Query: 469 LANKI 473
           ++ KI
Sbjct: 753 ISEKI 757


>gi|62391866|ref|YP_227268.1| leucyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41223013|emb|CAF18958.1| LEUCYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 964

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 69  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAI 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 129 QTGTHPRTTTMANIENMKRQLGALGLGHD 157


>gi|15806352|ref|NP_295058.1| isoleucyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81551300|sp|Q9RUP8|SYI_DEIRA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|6459088|gb|AAF10907.1|AE001980_2 isoleucyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 1078

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 16/173 (9%)

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----- 226
           Y    L +++S    +  I    E+       L DL L R   D      D  +Y     
Sbjct: 493 YWGTPLPFWQSESGQLRVIGSVAELSELAGRDLSDLDLHRPYIDDITFTLDGEEYRRVPE 552

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK-------AKFWPADLHVIGKDILR--FHAIYWPA 277
           ++ VW D+ +      G L N  G         AK +PAD      D  R  F++++  +
Sbjct: 553 VLDVWFDSGSMPYAQWGLLLNEQGEAVRGAEQFAKHYPADYICEAIDQTRGWFYSLHAIS 612

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +L  + P  K V   G I+  KG K+SKS GNV+ P+ + ++ G D++R+++
Sbjct: 613 TMLY-DQPAYKNVICLGHIVDEKGLKMSKSKGNVVAPLPLFDQYGADSVRWYM 664


>gi|116205303|ref|XP_001228462.1| hypothetical protein CHGG_10535 [Chaetomium globosum CBS 148.51]
 gi|88176663|gb|EAQ84131.1| hypothetical protein CHGG_10535 [Chaetomium globosum CBS 148.51]
          Length = 1120

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           F+P D+   GKD++  H  +W    L  ++ L      P+ V ++G +   GEK+SKS G
Sbjct: 705 FYPLDIRCSGKDLIPNHLTFW----LYNHIALFPREYWPRSVRANGHLQLNGEKMSKSTG 760

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           N +   +V+++ G DA R  L    A   DG  D +
Sbjct: 761 NFMTLNDVVQKYGADAARVAL----ADAGDGISDSN 792


>gi|113461402|ref|YP_719471.1| valyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823445|gb|ABI25534.1| valyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 948

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 13/66 (19%)

Query: 12 AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
          AI  PN     H+GHA++ I+ D L RF+R++G + L+ TGTD           +AG+ T
Sbjct: 38 AIPPPNVTGSLHMGHAFQQILMDTLIRFNRMEGNNTLWQTGTD-----------HAGIAT 86

Query: 70 KVFVDQ 75
          ++ V++
Sbjct: 87 QMVVER 92



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +     K  F P D+ + G DI+ F       F +      
Sbjct: 472 VLDTWFSSGLWTFSTLGWPEQTKELKI-FHPTDVLITGFDIIFFWVARMIMFTMHFIKDE 530

Query: 281 --SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                +P  K V+  G I   +G+K+SKS GNV+DPI++I+ + ++ L
Sbjct: 531 NGKPQVPF-KTVYVTGLIRDEQGQKMSKSKGNVLDPIDMIDGISLEDL 577


>gi|330508266|ref|YP_004384694.1| leucyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328929074|gb|AEB68876.1| leucyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 950

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 12/179 (6%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGN 309
           A ++P DL   GKD++  H +++  +   A  P    PK +  +GF+  +G+K+SKS G 
Sbjct: 577 AYWYPVDLRTSGKDLVANHLLFF-LYHHVAIFPEQLWPKAIAVNGFVSLEGQKMSKSKGP 635

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           ++   + + E G D  R +++       D  +  DG++   +A L +   NL    ++  
Sbjct: 636 LLTLRQAVAENGADVTRLYILGNAEGTADVDWRNDGVEA-THAHL-DRFYNLAREIMA-- 691

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               DG I      T  D  +LS   R + +  E M+     RAL     L+    R++
Sbjct: 692 ----DGSIDESAEKTLIDRWMLSRLQRRIVQATEAMEEIQTRRALQSAFYLLMGDLRWY 746



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 26/56 (46%)

Query: 3  EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
          ER+K  ++    Y N   H GH     I D  AR+ R+ G +VLF  G    G  I
Sbjct: 30 ERQKFLLTIPYPYLNGNLHAGHTRTFTIGDAYARYKRMRGYNVLFPMGFHATGTPI 85


>gi|326559779|gb|EGE10189.1| leucyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227


>gi|315179260|gb|ADT86174.1| isoleucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 948

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +       +   G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYAVVDSREEFHGAEA-----DMYLEGSDQHRGWFQSSLISSIAMKGKAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KEVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635


>gi|227548569|ref|ZP_03978618.1| leucyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079398|gb|EEI17361.1| leucyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 941

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL +     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 52  DKLNVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAI 111

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +   + N  N     D L + +D
Sbjct: 112 QTGTHPRTTTEANIANMTRQLDSLGLGHD 140


>gi|76363441|sp|Q4J8J7|SYL2_SULAC RecName: Full=Leucyl-tRNA synthetase 2; AltName:
          Full=Leucine--tRNA ligase 2; Short=LeuRS 2
          Length = 942

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 34/71 (47%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          ++K + + A  YPN+  H+GH    +  D+ AR+ R+ G +VLF       G  I   A 
Sbjct: 25 KKKFFTTIAFPYPNSPFHLGHGRTYVTGDIYARYMRMRGYNVLFPMAFHYTGTPIIAMAD 84

Query: 64 NAGVTTKVFVD 74
          +     K  +D
Sbjct: 85 DVAKGDKELID 95



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+   GKD++  H  ++  F  +A  P    PK +  +GF+L+ G+K+SKSL N++
Sbjct: 570 WYPLDVRHSGKDLVPNHLSFF-IFNHAAIFPHQLWPKGIAVNGFVLYDGKKMSKSLRNIV 628

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKD 338
              + I     D +R  L      G D
Sbjct: 629 PLRKAIRMYSPDVIRIALTTNADIGSD 655


>gi|57238808|ref|YP_179944.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819291|sp|Q5HC99|SYV_EHRRW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57160887|emb|CAH57790.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 810

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 18/231 (7%)

Query: 257 PADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PA L     +I+R  A Y    A+    ++P    + S   +     K+SKS GN + P 
Sbjct: 487 PASLRAQSHEIIRSWAFYTILQAYYHHNSIPWENIMVSGWCLAADKSKMSKSKGNALIPN 546

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKD 372
           ++++E G D +RY+       G D  +  + L+  KR+   L N      S+ VSM +  
Sbjct: 547 QLLQEYGADVIRYWAANS-RLGSDTVFSDEVLQLGKRLVTKLWNA-----SKFVSMFVS- 599

Query: 373 YDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
               IP     TE+ D+ +L+   +V+ +  E+        AL  + S   +   D Y +
Sbjct: 600 -QCQIPDLNCVTETMDKWVLTKLYKVIVKATESFNVFEYCVALDYIESFFWKDFCDNYLE 658

Query: 430 --AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++ +    TN +  S V  ++  V+  L  +L  F+P +  +I+  L+
Sbjct: 659 LVKKRAYGESVTNKENLSAVNTLSF-VLMALLKMLAPFMPYITEEIYSTLY 708



 Score = 40.0 bits (92), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------QKIAK--AAQNAGV 67
           + Q HIGH +     D +AR+ R+ G DVL+  G D++G       +KI K  AA     
Sbjct: 48  SGQLHIGHVFSYCHTDFIARYQRMLGKDVLYPIGFDDNGLPTERLVEKIKKVRAADIDRK 107

Query: 68  TTKVFVDQNSRNFRD----MADVLDISYD 92
             K   ++ S  FR     +   L ISYD
Sbjct: 108 EFKALCNEVSAKFRMEFKILFQSLGISYD 136


>gi|326565043|gb|EGE15243.1| leucyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326574150|gb|EGE24098.1| leucyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 14/176 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+LL
Sbjct: 160 TVNWDPVDHTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELL 208



 Score = 37.0 bits (84), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI--GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           L  T Y  N DGS   ++P ++  +  G +I              A L    K  + G I
Sbjct: 584 LAGTYYRSNSDGSTTYYFPHEIDFVMNGTEIE------------GATLKADGKPVTIGKI 631

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               EK+SKS  N +DP E+IE+ G D +R + +
Sbjct: 632 ----EKMSKSKNNGVDPQEIIEQYGADTVRLYTL 661


>gi|303233289|ref|ZP_07319960.1| isoleucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480589|gb|EFL43678.1| isoleucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 935

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 19/122 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
           I+ VW D+  ++     +  N        +PAD+++ G D    H  ++ + L+++    
Sbjct: 547 ILDVWWDSGVSHTAVCKHRKN------LHFPADMYLEGSDQ---HRGWFMSSLMTSVGAY 597

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACG 336
            +   K V S GF L  +G K+SKSLGNVIDP +V    G D +R ++       ++AC 
Sbjct: 598 GVAPYKAVVSQGFTLDGQGRKMSKSLGNVIDPNKVCATQGADIIRLWVASVDTSVDVACD 657

Query: 337 KD 338
            D
Sbjct: 658 DD 659



 Score = 42.4 bits (98), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 18/135 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   H+GHA   I  D++ R+  + G    F  G D HGQ I    + 
Sbjct: 50  KKFVLHDGPPYANGPIHLGHAMNKISKDIINRYWSMRGYQTPFVPGWDCHGQPIEHKVET 109

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----------------HHDTCRI 108
             + T+ F        R++   + +   D  R   KR                 +D C I
Sbjct: 110 M-LGTEKFNALPVAKIRELCRKMAVEQVDTQRQGFKRLGVLGEWDNPYLTYVHDYDACDI 168

Query: 109 -LWKKISDKGDIYKG 122
            ++K + D G +Y+G
Sbjct: 169 EIFKALFDNGSVYRG 183


>gi|281334672|gb|ADA61756.1| Isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
          Length = 1024

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 51/245 (20%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD    G D  R  F+++   + +L       K+  S G IL   G+K+SKS GNVI+
Sbjct: 537 FPADFIAEGVDQTRGWFYSLLVISTILKGKSSY-KRALSLGHILDSNGKKMSKSKGNVIN 595

Query: 313 PIEVIEEVGVDALRYFLVRE-------------IACGKDGFYDK-DGLKKRVNADLANGI 358
           P E+I + G D+LR+ L+ +             +A  K  F D  D + K  N  + N I
Sbjct: 596 PTELINKYGADSLRWALISDSAPWNNKRFSENIVAQTKSKFIDTLDNIYKFYN--MYNKI 653

Query: 359 -----GNLVSRSVSMI----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 N +++S + +    L   + +I     +  + +   +  +R++ E    + N  
Sbjct: 654 DHYNPNNEITKSRNTLDNWALSRLNTLIKESNIYVNNYD--FTSAARLINEYTNTISNWY 711

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPK 468
           I R+  +                 WE   +N  + A   LY   E++  L+ L+  FVP 
Sbjct: 712 IRRSRGRF----------------WEQGISNDKKDAYNTLY---EILTTLSRLVAPFVPF 752

Query: 469 LANKI 473
           ++ KI
Sbjct: 753 ISEKI 757


>gi|260581957|ref|ZP_05849753.1| isoleucyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095150|gb|EEW79042.1| isoleucyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 941

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKHDLVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++      +EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQKEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|91202863|emb|CAJ72502.1| strongly similar to isoleucine tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 938

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PADL++ G D  R  F     P+       P  K V +HGF++ + GEK+SKS+GN I 
Sbjct: 560 YPADLYLEGTDQHRGWFQLSLIPSVGAWGKAPF-KSVLTHGFVVDEMGEKMSKSIGNFIS 618

Query: 313 PIEVIEEVGVDALRYF 328
             ++++E G D LR +
Sbjct: 619 VEDILKEFGADILRLW 634



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           ++K  +     YP  + HIG     I+ D + RF  ++G D  +  G D HG  I  +  
Sbjct: 47  KKKYILHDGPPYPTGELHIGTGLNKILKDFIVRFFTMEGYDAPYVPGWDCHGLPIEHRVM 106

Query: 63  QNAGVTTK 70
           Q  G   K
Sbjct: 107 QEVGSEVK 114


>gi|72001587|ref|NP_505070.2| Valyl tRNA Synthetase family member (vrs-1) [Caenorhabditis
           elegans]
          Length = 918

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 19/165 (11%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G K+  DP  ++  W  +    L   G+L+   G+  +    ++   G DI  F    W 
Sbjct: 428 GDKMQQDPD-VLDTWFSSALVPLVKNGWLE---GAPIQTPSLNVMETGWDISGF----WV 479

Query: 277 AFLLSANLPLPK------KVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A +++ N+ L        KV  HG +  ++G K+SKSLGNVIDP++V++ +  +     +
Sbjct: 480 ARMIALNMKLSSGETPFGKVVLHGLVRDNEGRKMSKSLGNVIDPLDVLDGITFEK----M 535

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +  +        + D   K +     NGI      ++   L  YD
Sbjct: 536 IERVKSSAHEKEEIDNAVKDLTKRFPNGISRCGPDALRFALLKYD 580


>gi|323492574|ref|ZP_08097720.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313176|gb|EGA66294.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 942

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 36.6 bits (83), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|300741653|ref|ZP_07071674.1| isoleucine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380838|gb|EFJ77400.1| isoleucine--tRNA ligase [Rothia dentocariosa M567]
          Length = 1115

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)

Query: 221 PDDP---------QYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHV--IGKDIL 268
           PDDP         + ++ VW D+ +       Y  +N D  +  + PAD  V  IG+   
Sbjct: 574 PDDPTGKSTMRRVEDVLDVWFDSGSMPYAQVHYPFENKDWFENHY-PADFIVEYIGQTRG 632

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
            F+ ++  A  L  + P  K V SHG +L   G+K+SKSL N  D  EV++  G DA+R+
Sbjct: 633 WFYTLHILATAL-FDRPAFKNVVSHGIVLGSDGQKMSKSLRNYPDVSEVLDRDGSDAMRW 691

Query: 328 FLVRE-IACGKDGFYDKDGLKKRV 350
           FL+   I  G +    + G+++ V
Sbjct: 692 FLMSSPILRGGNLIVTEQGIREGV 715


>gi|167725508|ref|ZP_02408744.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 1021

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 565 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 620

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 621 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 664


>gi|158296182|ref|XP_316654.3| AGAP006624-PA [Anopheles gambiae str. PEST]
 gi|157016389|gb|EAA11340.4| AGAP006624-PA [Anopheles gambiae str. PEST]
          Length = 963

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 16/117 (13%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            + I  DP  ++  W  +     ++TG+   P       +P  L   G DIL     +W 
Sbjct: 486 AVSIEQDPD-VLDTWFSSGLLPFSSTGW---PGNVSPAHYPLQLMETGHDIL----FFWV 537

Query: 277 AFL------LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
           A +      L+  LP  ++V  HG I  + G K+SKSLGNVI P  VI  + ++ L+
Sbjct: 538 ARMVMLGQELTGKLPF-ERVLLHGIICDEFGRKMSKSLGNVIKPDHVIHGISLERLQ 593


>gi|116513839|ref|YP_812745.1| isoleucyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275391|sp|Q04B65|SYI_LACDB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116093154|gb|ABJ58307.1| Isoleucyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125496|gb|ADY84826.1| Isoleucyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 931

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 10/116 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++             +A  +P  +++ G D  R  F++    +   +   
Sbjct: 526 ILDVWFDSGSSWSGVQAL------GRAVHYPTSMYLEGSDQYRGWFNSSLITSVATNGVA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           P  K V S GF L  +G K+SKSLGN I P +VI+++G + +R ++    A G  G
Sbjct: 580 PY-KSVLSQGFTLDGQGRKMSKSLGNTIAPNDVIKQMGAEIIRLWVASVDASGDVG 634



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 28/68 (41%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  +     + N   H+GHA   I  D++ R   ++G    +  G D HG  I +    
Sbjct: 48  ERFDLHDGPPFANGNIHMGHALNKITKDIIVRSKNMEGYYAPYVPGWDTHGLPIEQQLTK 107

Query: 65  AGVTTKVF 72
            GV  K  
Sbjct: 108 QGVDRKTM 115


>gi|312881896|ref|ZP_07741659.1| isoleucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370414|gb|EFP97903.1| isoleucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 625

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +        +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 221 VWFDSGVTHFSVVDARKEYEGNSA-----DLYLEGSDQHRGWFQSSLISSIAMKDEAPY- 274

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  L
Sbjct: 275 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSDEI-L 333

Query: 347 KKRVNA 352
           K+  +A
Sbjct: 334 KRSADA 339


>gi|260771134|ref|ZP_05880061.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613731|gb|EEX38923.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 948

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +       +   G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYAVVDSREEFHGAEA-----DMYLEGSDQHRGWFQSSLISSIAMKGKAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KEVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635


>gi|153956201|ref|YP_001396966.1| leucyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856526|ref|YP_002473648.1| hypothetical protein CKR_3183 [Clostridium kluyveri NBRC 12016]
 gi|189082994|sp|A5N399|SYL_CLOK5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146349059|gb|EDK35595.1| LeuS [Clostridium kluyveri DSM 555]
 gi|219570250|dbj|BAH08234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 811

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 17/120 (14%)

Query: 244 YLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKK 289
           Y DN +  KA       K  P D++V G +    H +Y   F+  A       N   P  
Sbjct: 497 YADNKNTEKAFDKDKINKLLPVDMYVGGPEHACMHLLY-ARFITKALRDMGFLNFDEPFL 555

Query: 290 VFSH-GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              H G IL   G+K+SKS GN I P + I++ G D  R +L+      + G ++ DG+K
Sbjct: 556 SLRHQGLILGPDGQKMSKSKGNTISPDDCIQKYGSDVFRMYLMFGFDYAEGGAWNDDGIK 615


>gi|296113510|ref|YP_003627448.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921204|gb|ADG61555.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326572403|gb|EGE22395.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227



 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI--GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           L  T Y  N DGS   ++P ++  +  G +I              A L    K  + G I
Sbjct: 584 LAGTYYRSNSDGSTTYYFPHEIDFVMNGTEIE------------GATLKADGKPVTIGKI 631

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               EK+SKS  N +DP E+IE+ G D +R + +
Sbjct: 632 ----EKMSKSKNNGVDPQEIIEQYGADTVRLYTL 661


>gi|300772039|ref|ZP_07081909.1| isoleucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760342|gb|EFK57168.1| isoleucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 1151

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 249 DGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISK 305
           +G ++ F PAD    G D  R  F  ++  + +L  ++   K V S+G +L K G K+SK
Sbjct: 647 EGFESAF-PADFIAEGVDQTRGWFFTLHAISTMLRKSVAF-KNVVSNGLVLDKNGNKMSK 704

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            LGN +DP   I+    DA R++++   A   +  ++ +GL
Sbjct: 705 RLGNGVDPFATIDHYSADATRWYMISNAAPWDNLKFNTEGL 745



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 17  NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-GVT-----TK 70
           N  P I HA    I D+  R+  L G  V    G D HG  I  A +   G+T      K
Sbjct: 64  NGMPGIHHAMARSIKDIFCRYKTLKGYQVKRKGGWDTHGLPIELAVEKTLGITKEDIGKK 123

Query: 71  VFVDQ-NSRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKG 117
           + V++ N+   +++    D+  D  I+            T E  + +T   L K++  KG
Sbjct: 124 ISVEEYNAACRKEVMKYTDVWNDLTIKMGYWVDLENPYITYENEYIETLWYLLKELYKKG 183

Query: 118 DIYKG 122
            +YKG
Sbjct: 184 LLYKG 188


>gi|305855130|ref|NP_001182307.1| valyl-tRNA synthetase [Sus scrofa]
 gi|162138236|gb|ABX82822.1| valyl-tRNA synthetase [Sus scrofa]
          Length = 1265

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 12/83 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL     +W A +      L+  LP  K+V+ H  +    G K+SKSL
Sbjct: 814 FYPGTLLETGHDIL----FFWVARMVMLGLKLTGKLPF-KEVYLHAIVRDAHGRKMSKSL 868

Query: 308 GNVIDPIEVIEEVGVDALRYFLV 330
           GNVIDP++VI  V +  L   LV
Sbjct: 869 GNVIDPLDVIHGVSLQGLHNQLV 891


>gi|167906817|ref|ZP_02494022.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A          + P  
Sbjct: 574 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGHAPF- 629

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 630 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 673


>gi|125532574|gb|EAY79139.1| hypothetical protein OsI_34246 [Oryza sativa Indica Group]
          Length = 1048

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWP 276
           K+  DP  ++  W  +    L+  G+ D+     + F+P  +   G DIL F    +   
Sbjct: 563 KLDQDPD-VLDTWFSSGLFPLSVLGWPDS-TADLSSFYPTSVLETGLDILFFWVARMVMM 620

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             LL  ++P  +KV+ H  I    G K++K LGNVIDPI+VI  + ++ L   L      
Sbjct: 621 GMLLGGDVPF-QKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLD 679

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +    K+G KK    D  NGI    + ++   L  Y
Sbjct: 680 PSELEKAKEGQKK----DFPNGIPECGTDALRFALISY 713



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G   L+  G D           +AG+ T+V V++     
Sbjct: 138 HIGHAITVAIEDAMIRWRRMSGYSALWVPGMD-----------HAGIATQVVVEKRLMRD 186

Query: 81  RDMADVLDISYDDFI 95
           R+++   D+  D F+
Sbjct: 187 RNLSR-HDLGRDKFL 200


>gi|326559370|gb|EGE09795.1| leucyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227


>gi|323135807|ref|ZP_08070890.1| isoleucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398898|gb|EFY01417.1| isoleucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 1007

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           V +HGF+L  KG K+SKSLGNV+ P +VI + G D LR ++ 
Sbjct: 663 VLTHGFVLDEKGRKMSKSLGNVVAPQKVIADSGADILRLWVA 704



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 28/57 (49%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K R K  +     Y N   HIGHA   I+ DV+ R  R+ G D ++  G D HG  I
Sbjct: 52  KGRPKFTLHDGPPYANGNIHIGHALNKILKDVVTRSQRMTGKDCVYVPGWDCHGLPI 108


>gi|312378179|gb|EFR24821.1| hypothetical protein AND_10338 [Anopheles darlingi]
          Length = 830

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 18/109 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS----A 282
           I+ +W D+  ++ T  G          K   ADL++ G D  +F   +  + L S     
Sbjct: 586 ILDIWFDSGVSWCTVLG----------KDRVADLYLEGID--QFTGWFQSSLLTSVASRG 633

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             P  K +F HGF +   G K+SKSLGN+I P  +I + G D LR+++ 
Sbjct: 634 KAPY-KAIFVHGFAVDENGMKMSKSLGNIISPSSIITKYGCDVLRWWVC 681


>gi|300784293|ref|YP_003764584.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299793807|gb|ADJ44182.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 837

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K R+++Y I T     +   HIGH +     DVLARF R+ GL+V +  G D++G    +
Sbjct: 39  KTRDEVYSIDTPPPTVSGSLHIGHVFSFTHTDVLARFKRMRGLEVFYPMGWDDNGLPTER 98

Query: 61  AAQN 64
             QN
Sbjct: 99  RVQN 102



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 15/178 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV  P++++E  G DA+RY+       G D   D+  +K  V   LA  + N
Sbjct: 576 KKMSKSKGNVTTPVDLLERFGSDAVRYWAA-SARPGVDTAVDEGQMK--VGRRLATKLLN 632

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             SR V  +       +P PGA      D ++L+  + V  +    ++     RAL QV 
Sbjct: 633 -ASRFVLGL------GVPMPGAAATEPLDRALLASLAVVTGQATAALEASDYARAL-QVT 684

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                +  D Y +  K        PD A +     V  +  L  L   F+P    +++
Sbjct: 685 ETFFWTFCDDYVELVKGRAYGDRGPDAAQSARAALVTALSALLRLFAPFLPFATEEVW 742


>gi|167836887|ref|ZP_02463770.1| valyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 955

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 16/121 (13%)

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           K +   +K  DD   ++  W  +     ++ G+ D     K  F P+ + V G DI+ F 
Sbjct: 454 KGYAGALKRDDD---VLDTWFSSALVPFSSLGWPDETPELK-HFLPSSVLVTGFDIIFF- 508

Query: 272 AIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
              W A ++      +  +P  + V+ HG +   +G+K+SKS GN +DPI++++ +G+DA
Sbjct: 509 ---WVARMVMMTTHFTGKVPF-ETVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDA 564

Query: 325 L 325
           L
Sbjct: 565 L 565



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 54 HMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTD-----------HAGIATQIVVERQ 98


>gi|167742859|ref|ZP_02415633.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 804

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 519 VWFD--SGSIHATVYRDAARAGTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 574

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 575 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 618


>gi|126728331|ref|ZP_01744147.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126711296|gb|EBA10346.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 851

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 8/178 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ + +G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKQNGFNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N          L    D      T +  ++   + L+  +  +G +Y
Sbjct: 90  MASGGHPKDWTYGNIDTMVGQMKPLGFGLDWSRMFATCDPEYYGQQQALFIDMLSEGLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  +      N+  +    DG+ + +    V+  E   +FF++S    +LL
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAE-VERRELTQWFFKISDMAGELL 202


>gi|41615033|ref|NP_963531.1| leucyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|48428516|sp|P61760|SYL_NANEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|40068757|gb|AAR39092.1| NEQ239 [Nanoarchaeum equitans Kin4-M]
          Length = 977

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 24/144 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K +++ A  Y N   H+GH    I A++ AR+ ++ G DVLF  G    G  I  AA  
Sbjct: 2   KKFFVTAAFPYVNGYLHLGHLVTYIKAEITARYKKMRGYDVLFPMGFHATGAPIYAAAYK 61

Query: 65  AGV-------TTKVFVDQNSRNFRDMA------------DVLDISY-----DDFIRTTEK 100
             +       T K    ++   F+D A            D+  + +       F     K
Sbjct: 62  VSIGDPKQIETLKKMGIKDIEKFKDPAYWVEYFSKAAKEDLSKLGFMIEWERSFTTVFNK 121

Query: 101 RHHDTCRILWKKISDKGDIYKGCY 124
             H      + ++ +KG IY+G +
Sbjct: 122 PFHKFVEWQYHRLREKGYIYRGAH 145



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+    +D++  H +++  F   A  P    P+ +   GF+   GEK+SKS GN I
Sbjct: 650 WYPVDIRFSAQDLIANHLVFY-IFHHVAIFPESKWPRGIAVSGFVTVNGEKMSKSKGNFI 708

Query: 312 DPIEVIEEVGVDALR 326
              E I+  G DA+R
Sbjct: 709 TIREAIQRYGRDAVR 723


>gi|326566006|gb|EGE16166.1| leucyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDNTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227



 Score = 37.0 bits (84), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI--GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           L  T Y  N DGS   ++P ++  +  G +I              A L    K  + G I
Sbjct: 584 LAGTYYRSNSDGSTTYYFPHEIDFVMNGTEIE------------GATLKADGKPVTIGKI 631

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               EK+SKS  N +DP E+IE+ G D +R + +
Sbjct: 632 ----EKMSKSKNNGVDPQEIIEQYGADTVRLYTL 661


>gi|313679367|ref|YP_004057106.1| leucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152082|gb|ADR35933.1| leucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 876

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 1   MKERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           MK RE   K Y+     YP+   H+GH     + D LARF +  G  VL   G D  G  
Sbjct: 23  MKAREEGAKYYVLEMFPYPSGDLHMGHLKNYTMGDALARFKKQQGYSVLHPMGWDAFGLP 82

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISD 115
              AA   G     +   N    ++  +++ I Y  D  + T    ++   + ++ K+ +
Sbjct: 83  AENAALKFGKHPADWTFDNIAKAKESLNLMGILYDWDREVTTCTPDYYRWNQWIFIKMYE 142

Query: 116 KGDIYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            G +Y+ G    W         N+  V    +G+ +  +   V+    E ++ +++AY
Sbjct: 143 AGLVYRAGGLVNWCPKCQTVLANEQVV----EGRCWRHEDTLVEKKNLEQWYLKITAY 196


>gi|255941484|ref|XP_002561511.1| Pc16g12120 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586134|emb|CAP93882.1| Pc16g12120 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1075

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 20/253 (7%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD    G D  R  F+ +      L   LP  K V  +G +L   G K+SK L N  D
Sbjct: 548 FPADFIAEGLDQTRGWFYVLSVIGVHLRQKLPY-KNVVVNGIVLAENGLKMSKRLKNYPD 606

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSMI 369
           P  ++   G DALR +++       +    K+   K + + +   + N        V+++
Sbjct: 607 PALIMNSYGSDALRLYMINSPVVRAEPLRFKESGVKEIVSKVLLPLWNSYKFFEGQVTLL 666

Query: 370 LKDYD-GMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            K  D   +  P A + +    D  IL+ C  +L  I + M    ++  + +++ L+   
Sbjct: 667 KKTSDIDFVFNPAAESTNTNVMDRWILASCQSLLLFINQEMAAYRLYTVVPRLLELIDNT 726

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV---- 479
             ++       LK  N  D     L    EV+  L   L  F P + + I+  L      
Sbjct: 727 TNWYIRFNRKRLKGENGVDDTLHALNTLFEVLYTLVRGLAPFTPFVTDNIYQRLLPHIPE 786

Query: 480 ---ADENRCFQSL 489
              A+++RC   L
Sbjct: 787 SLRAEDSRCVHFL 799



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 19/127 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------------KAA 62
           +    PH GH     I DV+ R+  + G  V    G D HG  I             +A 
Sbjct: 41  FATGTPHYGHLLASTIKDVIPRYWSMKGFHVERRFGWDTHGVPIEYEIDKKLGMSGLQAV 100

Query: 63  QNAGV-----TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISD 115
           Q  G+       +  V + +  +R+  + L   I +D+  +T      ++   ++K++ D
Sbjct: 101 QEIGIEKYNEECRSIVMRYATEWRETIERLGRWIDFDNDYKTMNPSFMESVWWVFKELFD 160

Query: 116 KGDIYKG 122
           KG +Y+G
Sbjct: 161 KGLVYRG 167


>gi|162139459|ref|YP_001173543.2| valyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 944

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 46/204 (22%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W+ ++ ++       +K ++  ES     +P +  N   S+++  ++D  +SR+ + WG 
Sbjct: 374 WLTDQ-WYVSTKPLAEKAIAAVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQLW-WGH 430

Query: 219 KIPD--DPQYIMYV----------------------------WIDALTNYLTTTGYLDNP 248
           +IP   D    +YV                            W  +     +T G+    
Sbjct: 431 RIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSGLWTFSTLGWPQQT 490

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGE 301
           +  K  F P D+ V G DI+ F    W A +      L+  +P  K V+ HG +   +G+
Sbjct: 491 EFLKT-FHPTDVLVTGFDIIFF----WVARMIMLSTHLTGQIPF-KTVYVHGLVRDGQGQ 544

Query: 302 KISKSLGNVIDPIEVIEEVGVDAL 325
           K+SKS GNV+DP+++++ + +D L
Sbjct: 545 KMSKSKGNVLDPLDIVDGITLDEL 568


>gi|104773832|ref|YP_618812.1| isoleucyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077305|sp|Q1GAS8|SYI_LACDA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|103422913|emb|CAI97575.1| Isoleucyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 931

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 10/116 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++             +A  +P  +++ G D  R  F++    +   +   
Sbjct: 526 ILDVWFDSGSSWSGVQAL------GRAVHYPTSMYLEGSDQYRGWFNSSLITSVATNGVA 579

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           P  K V S GF L  +G K+SKSLGN I P +VI+++G + +R ++    A G  G
Sbjct: 580 PY-KSVLSQGFTLDGQGRKMSKSLGNTIAPNDVIKQMGAEIIRLWVASVDASGDVG 634



 Score = 37.0 bits (84), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 28/68 (41%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  +     + N   H+GHA   I  D++ R   ++G    +  G D HG  I +    
Sbjct: 48  ERFDLHDGPPFANGNIHMGHALNKITKDIIVRSKNMEGYYAPYVPGWDTHGLPIEQQLTK 107

Query: 65  AGVTTKVF 72
            GV  K  
Sbjct: 108 QGVDRKTM 115


>gi|55379537|ref|YP_137387.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232262|gb|AAV47681.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 895

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 16/178 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  Y+     Y +   H+GH     I D  ARF R+ G  VL   G D  G     AA
Sbjct: 37  ETDPEYVLAMFPYTSGSLHMGHVRNYTITDAYARFERMRGESVLHPMGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +      + +  Q   + RD    +   Y  D  + T E  ++   + L+K+  ++G + 
Sbjct: 97  EERDTNPRDWTMQCIDSMRDQLTEMGFGYDWDRELATCEPDYYQWNQWLFKQFREEGLVE 156

Query: 121 KG------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +       C S    L DE    ++E+    D         P++  E + +FF ++ Y
Sbjct: 157 RQAAELNWCPSCETVLADEQVEGEEELCWRCD--------TPIEAREMDQWFFTITDY 206



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 24/199 (12%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLP-KKVFSHGFILHK 299
           D  +A  W P D +V G +    H +Y   F        +   +  P   + + G +L +
Sbjct: 518 DAERASDWMPVDQYVGGIEHAVMHLLYARFFTKVLDDLDMVDGVREPFTNLTNQGMVLGE 577

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSL N + P  +IEE G D  R F++      K+  +  +G++           
Sbjct: 578 DGNKMSKSLDNGVSPQRIIEEYGADTARLFIMEAAQPEKEFAWSPEGVQS---------- 627

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRAL 414
            +   ++V  ++  Y          TE+   I    +R +     N   +      + AL
Sbjct: 628 AHSFLQNVYTLVSAYAEGEAGTATDTENGADIADYVAREIDATAANATAEFEDFRFNHAL 687

Query: 415 AQVISLVSEVDRYFDAQKP 433
             V  LVS + RY +A  P
Sbjct: 688 QAVRELVSLLRRYQEATTP 706


>gi|260771783|ref|ZP_05880701.1| isoleucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260613075|gb|EEX38276.1| isoleucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 948

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 10/126 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   +          +G++A     D+++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYAVVDTRPEFNGAQA-----DMYLEGSDQHRGWFQSSLISSVAMKGKAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D+  L
Sbjct: 592 KEVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSDEI-L 650

Query: 347 KKRVNA 352
           K+  +A
Sbjct: 651 KRSADA 656



 Score = 36.6 bits (83), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 25/128 (19%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   I+ D++ +   L G D  +  G D HG        +K+ K  Q   
Sbjct: 59  YANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-- 116

Query: 67  VTTKVF-----------VDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKIS 114
           VT   F           V+    +F+ +  + +  +D   RT +     +  R L  KI+
Sbjct: 117 VTAAEFREKCRDYAAGQVEGQKESFKRLGILGE--WDKPYRTMDFSTEANIIRAL-GKIA 173

Query: 115 DKGDIYKG 122
           D G + KG
Sbjct: 174 DNGHLLKG 181


>gi|229819277|ref|YP_002880803.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511825|sp|C5BYT3|SYC_BEUC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229565190|gb|ACQ79041.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 474

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 8/139 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K+ I    A    +PH+GH   +I  DVL R+ R  GLDV       +   KI   +
Sbjct: 20  EPGKVGIYLCGATVQGEPHVGHLRSVIAFDVLVRWLRRSGLDVTMIRNVTDIDDKILAKS 79

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR---HHDTCRILWKKISDKGDI 119
             AGV    +  ++ R F D  D +     +   T E R   H      L +++ D+G+ 
Sbjct: 80  AEAGVPWWAWAYRHERAFSDAYDAV----GNLPPTYEPRATGHVVEMIELMQRLVDRGNA 135

Query: 120 YKGCYSG-WYSLRDEAYYN 137
           Y+G     W+ +R  A Y 
Sbjct: 136 YRGKDGNVWFDVRSLADYG 154


>gi|297727735|ref|NP_001176231.1| Os10g0506200 [Oryza sativa Japonica Group]
 gi|222613104|gb|EEE51236.1| hypothetical protein OsJ_32094 [Oryza sativa Japonica Group]
 gi|255679539|dbj|BAH94959.1| Os10g0506200 [Oryza sativa Japonica Group]
          Length = 1042

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWP 276
           K+  DP  ++  W  +    L+  G+ D+     + F+P  +   G DIL F    +   
Sbjct: 557 KLDQDPD-VLDTWFSSGLFPLSVLGWPDS-TADLSSFYPTSVLETGLDILFFWVARMVMM 614

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             LL  ++P  +KV+ H  I    G K++K LGNVIDPI+VI  + ++ L   L      
Sbjct: 615 GMLLGGDVPF-QKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLD 673

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +    K+G KK    D  NGI    + ++   L  Y
Sbjct: 674 PSELEKAKEGQKK----DFPNGIPECGTDALRFALISY 707



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 132 HIGHAITVAIEDAMIRWRRMSGYNALWVPGMD-----------HAGIATQVVVEKRLMRD 180

Query: 81  RDMADVLDISYDDFI 95
           R+++   D+  D F+
Sbjct: 181 RNLSR-HDLGRDKFL 194


>gi|149001939|ref|ZP_01826893.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759748|gb|EDK66738.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 392

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PADL++ G D  R  F++    +       P  K++ S GF L  KGEK+SKSLGN I 
Sbjct: 9   YPADLYLEGSDQYRGWFNSSLITSVANHGVAPY-KQILSQGFALDGKGEKMSKSLGNTIA 67

Query: 313 PIEVIEEVGVDALRYFLV 330
           P +V ++ G + LR ++ 
Sbjct: 68  PSDVEKQFGAEILRLWVT 85


>gi|327481783|gb|AEA85093.1| valyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 944

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 46/204 (22%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W+ ++ ++       +K ++  ES     +P +  N   S+++  ++D  +SR+ + WG 
Sbjct: 374 WLTDQ-WYVSTKPLAEKAIAAVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQLW-WGH 430

Query: 219 KIPD--DPQYIMYV----------------------------WIDALTNYLTTTGYLDNP 248
           +IP   D    +YV                            W  +     +T G+    
Sbjct: 431 RIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSGLWTFSTLGWPQQT 490

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH-KGE 301
           +  K  F P D+ V G DI+ F    W A +      L+  +P  K V+ HG +   +G+
Sbjct: 491 EFLKT-FHPTDVLVTGFDIIFF----WVARMIMLSTHLTGQIPF-KTVYVHGLVRDGQGQ 544

Query: 302 KISKSLGNVIDPIEVIEEVGVDAL 325
           K+SKS GNV+DP+++++ + +D L
Sbjct: 545 KMSKSKGNVLDPLDIVDGITLDEL 568


>gi|326575588|gb|EGE25512.1| leucyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     AA    V
Sbjct: 41  YMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENAAIANAV 100

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +   N  N R+    L +S D   +F   T + ++   + L+ ++  KG +YK   
Sbjct: 101 APAKWTFDNIANMREQLKALGLSIDWSREFATCTPE-YYRWEQWLFLQLYKKGLVYKKLA 159

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL---LS 178
           +  +   D     +++V  G     G     +  P+       Y+F+++ Y D+L   L 
Sbjct: 160 TVNWDPVDHTVLANEQVVDGRGWRSGAIVEKRDIPM-------YYFKITDYADELLDDLK 212

Query: 179 YYESH-PEFILPIER 192
             E H P+ +L +++
Sbjct: 213 TLEGHWPKQVLSMQQ 227


>gi|237747004|ref|ZP_04577484.1| valyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378355|gb|EEO28446.1| valyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 933

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 16/163 (9%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           I  DP  ++  W  +     +T G+ D+    +  F P+ + V G DI+     +W A +
Sbjct: 453 IRRDPD-VLDTWFSSALVPFSTVGWPDDTPEYRM-FLPSTVLVTGFDII----FFWVARM 506

Query: 280 LSANLPLPKKV-----FSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +   L    KV     + HG +    G+K+SKS GN ++PI++I+ + VD+    LV++ 
Sbjct: 507 VMMTLHFTGKVPFRTVYVHGLVRDANGQKMSKSKGNTLNPIDLIDGIDVDS----LVKQR 562

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
             G       D + K    +   GI    + ++   +  Y  +
Sbjct: 563 TFGLMNPKQADSIAKATRKEFGKGIPAFGTDALRFTMASYASL 605



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 18/76 (23%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA+   I D L R+HR+ G +  +  GTD           +AG+ T++ V++     
Sbjct: 51  HMGHAFNQTIMDGLVRYHRMRGFNTAWIPGTD-----------HAGIATQIVVERQ---- 95

Query: 81  RDMADVLDISYDDFIR 96
               D  +IS  D  R
Sbjct: 96  ---LDAQNISRHDLGR 108


>gi|147225159|emb|CAN13336.1| valyl-tRNA synthetase 2 [Sus scrofa]
          Length = 1264

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 12/83 (14%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL     +W A +      L+  LP  K+V+ H  +    G K+SKSL
Sbjct: 813 FYPGTLLETGHDIL----FFWVARMVMLGLKLTGKLPF-KEVYLHAIVRDAHGRKMSKSL 867

Query: 308 GNVIDPIEVIEEVGVDALRYFLV 330
           GNVIDP++VI  V +  L   LV
Sbjct: 868 GNVIDPLDVIHGVSLQGLHNQLV 890


>gi|87123001|ref|ZP_01078860.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161718|gb|EAQ63024.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 940

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  K+V +HGF +   G K+SKSLGNV+ P
Sbjct: 557 PADLYLEGSDQHRGWFQSSLKTSIAVRGVAPY-KQVLTHGFTVDGDGRKMSKSLGNVLSP 615

Query: 314 IEVIEEVGVDALRYFLV 330
            +V+  +G D +R ++ 
Sbjct: 616 QKVMNSLGADIIRLWVA 632



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           K R+   +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG      
Sbjct: 46  KGRKSFILHDGPPYANGDIHIGHAVNKILKDIIVKSKTVSGFDAPYIPGWDCHGLPIEHK 105

Query: 56  --QKIAKAAQNAGVTTKVF 72
             Q I KA   A VT K F
Sbjct: 106 VEQMIGKAG--AKVTHKEF 122


>gi|84687979|ref|ZP_01015843.1| leucyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664011|gb|EAQ10511.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 848

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + HIGH     + DV+AR+ +  G  VL   G D  G     AA 
Sbjct: 31  KPKFYVLEMFPYPSGRIHIGHVRNYTMGDVVARYKKSSGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGDIY 120
             G   K +   N    +     +  S  D+ R   T +  ++   + L+    +K  +Y
Sbjct: 91  ATGGHPKDWTYNNIAEMKSQMKPMGWSL-DWTREFATCDPEYYGQQQALFIDFLEKDLVY 149

Query: 121 -KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            K     W  +      N+  +    DG+ + +    V+  E   +FF++S + ++LL
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVI----DGKGWRSGAE-VERRELTQWFFKISDFSEELL 202



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 31/176 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+E+I + G D  R+F++ +    +D  +   G         A G    
Sbjct: 621 KMSKSKKNVVDPLEIIAQYGADTARWFVMSDSPPERDVEWTASG---------AEGASKH 671

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   +  +     I       E DE +L    + ++ + + ++    + ++A++    
Sbjct: 672 LARVYRIAAE-----IAEATGTGEGDEDLLREMHKTIKAVTDGIEGFAFNTSIAKLYGFT 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + +   ++   E KKT               +R +A L+    P LA +++ +L
Sbjct: 727 NTLSK---SKAGAETKKT--------------AMRVMAQLMAPMTPHLAEEVWAML 765


>gi|302879726|ref|YP_003848290.1| valyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582515|gb|ADL56526.1| valyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 941

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 16/112 (14%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKS 306
           ++ P+ + V G DI+ F    W A +      ++  +P  K V+ HG I   +G+K+SKS
Sbjct: 496 RYLPSTVLVTGFDIIFF----WVARMVMMTKHITGRIPF-KDVYVHGLIRDSEGQKMSKS 550

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GNV+DPI++I+ + ++     L+++   G       + ++KR   +  NGI
Sbjct: 551 KGNVLDPIDLIDGIALED----LIKKRTTGLMNPKQAEQIEKRTKKEFPNGI 598



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GH +   + D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHGFNQTLMDTLTRYHRMRGDNTLWQPGTD-----------HAGIATQIVVERQ 96


>gi|228475846|ref|ZP_04060560.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|228270122|gb|EEK11582.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
          Length = 1024

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 51/245 (20%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD    G D  R  F+++   + +L       K+  S G IL   G+K+SKS GNVI+
Sbjct: 537 FPADFIAEGVDQTRGWFYSLLVISTILKGKSSY-KRALSLGHILDSNGKKMSKSKGNVIN 595

Query: 313 PIEVIEEVGVDALRYFLVRE-------------IACGKDGFYDK-DGLKKRVNADLANGI 358
           P E+I + G D+LR+ L+ +             +A  K  F D  D + K  N  + N I
Sbjct: 596 PTELINKYGADSLRWALISDSAPWNNKRFSENIVAQTKSKFIDTLDNIYKFYN--MYNKI 653

Query: 359 -----GNLVSRSVSMI----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 N +++S + +    L   + +I     +  + +   +  +R++ E    + N  
Sbjct: 654 DHYNPNNEITKSRNTLDNWALSRLNTLIKESNIYVNNYD--FTSAARLINEYTNTISNWY 711

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPK 468
           I R+  +                 WE   +N  + A   LY   E++  L+ L+  FVP 
Sbjct: 712 IRRSRGRF----------------WEQGISNDKKDAYNTLY---EILTTLSRLVAPFVPF 752

Query: 469 LANKI 473
           ++ KI
Sbjct: 753 ISEKI 757


>gi|145297006|ref|YP_001139827.1| leucyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166231602|sp|A4QI59|SYL_CORGB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|140846926|dbj|BAF55925.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 952

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 57  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAI 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 117 QTGTHPRTTTMANIENMKRQLGALGLGHD 145


>gi|153005579|ref|YP_001379904.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029152|gb|ABS26920.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 838

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 38/88 (43%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA  
Sbjct: 35  EKRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGHDVLHPIGFDALGLPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD 92
            G   +    +N   FR     L  ++D
Sbjct: 95  DGRHPEERTRENIVAFRAEMKKLGYAFD 122


>gi|328947503|ref|YP_004364840.1| leucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447827|gb|AEB13543.1| leucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 888

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 3/123 (2%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++ YI     YP+ A  H+GH       D+ +R+ R++G +VL   G D  G      
Sbjct: 33  KEKRRYILDMFPYPSGAGLHVGHPEGYTATDIYSRYLRMNGYNVLHPMGYDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +  + N  NF      L  SY  D  + T E  ++   + ++ ++  KG  
Sbjct: 93  AIKTGTHPSITTNANIANFTRQIKALGFSYDWDRCVSTCEPEYYKWTQWIFLQLYKKGLA 152

Query: 120 YKG 122
           Y+ 
Sbjct: 153 YEA 155


>gi|319956382|ref|YP_004167645.1| isoleucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418786|gb|ADV45896.1| Isoleucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 918

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 10/108 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           I+ VW D+ + +      L +      +F PAD+++ G D  R    +  + LLS+ +  
Sbjct: 536 ILDVWFDSGSTW---NAVLKSRRYDAGEF-PADMYLEGSDQHR--GWFQSSLLLSSAINF 589

Query: 285 -PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            P  + + +HGF +   GEK+SKS GNV+ P +V ++ G + LR ++ 
Sbjct: 590 HPPYRSILTHGFTVDENGEKMSKSRGNVVAPQKVTQQFGSEILRLWVA 637



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-------- 55
           R+   +     Y N + HIGHA   I+ D++ + H   G  V +T G D HG        
Sbjct: 47  RKMFTLHDGPPYANGEIHIGHALNKILKDIIVKHHYFQGEAVRYTPGWDCHGLPIEQKVE 106

Query: 56  QKIAKAAQNA 65
           ++I KA ++A
Sbjct: 107 ERIGKAKKDA 116


>gi|19554211|ref|NP_602213.1| leucyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|29336546|sp|Q8NLC4|SYL_CORGL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21325791|dbj|BAC00412.1| Leucyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 952

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 57  DKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAI 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N +     L + +D
Sbjct: 117 QTGTHPRTTTMANIENMKRQLGALGLGHD 145


>gi|149192164|ref|ZP_01870384.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834004|gb|EDL51021.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 942

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G+ A     DL++ G D  R  F +    +  +    P  
Sbjct: 538 VWFDSGVTHYSVVDAREEYNGNSA-----DLYLEGSDQHRGWFQSSLITSIAMKDEAPY- 591

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++   G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 592 KQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 635



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 25/141 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG      
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 56  --QKIAKAAQNAGVTTKVF-----------VDQNSRNFRDMADVLDISYDDFIRTTE-KR 101
             +K+ K  Q   VT   F           V+    +F+ +  + +  +D   RT +   
Sbjct: 106 VEKKVGKPGQK--VTAAEFREKCRTYAEGQVEGQKESFKRLGILGE--WDKPYRTMDFDT 161

Query: 102 HHDTCRILWKKISDKGDIYKG 122
             +  R L  KI+DKG + KG
Sbjct: 162 EANIIRAL-GKIADKGHLLKG 181


>gi|284931508|gb|ADC31446.1| Isoleucyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 897

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 16/105 (15%)

Query: 227 IMYVWIDALT--NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+ T  N L   G  D           A ++  G D  R  F++    A +L+ 
Sbjct: 524 ILDVWFDSGTSFNVLKENGIKD----------KATIYFEGSDQYRGWFNSSMICATVLNK 573

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
             P  +++ SHGF L  KG K+SKS GNVI P+ +I+  G D LR
Sbjct: 574 TAPY-EELISHGFTLDEKGMKMSKSQGNVISPLTIIKNKGADILR 617


>gi|255076041|ref|XP_002501695.1| predicted protein [Micromonas sp. RCC299]
 gi|226516959|gb|ACO62953.1| predicted protein [Micromonas sp. RCC299]
          Length = 1060

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 10/84 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKS 306
           A+F+P  L   G DIL F    W A ++   + L  KV      LH       G K+SKS
Sbjct: 605 AEFYPTALLETGHDILFF----WVARMVMMGMKLTGKVPFKQVYLHAMVRDAHGRKMSKS 660

Query: 307 LGNVIDPIEVIEEVGVDALRYFLV 330
           LGNVIDP+ VIE + +  L   L 
Sbjct: 661 LGNVIDPLHVIEGISLKDLNETLT 684


>gi|53722340|ref|YP_111325.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|81824514|sp|Q63KP6|SYI2_BURPS RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|52212754|emb|CAH38786.1| putative isoleucyl-tRNA synthetase [Burkholderia pseudomallei
           K96243]
          Length = 967

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|329122984|ref|ZP_08251555.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327471915|gb|EGF17355.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 941

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|308048500|ref|YP_003912066.1| isoleucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630690|gb|ADN74992.1| Isoleucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 940

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF +  KG K+SKSLGNV+ P +V+ ++G D LR ++ 
Sbjct: 592 KQVLTHGFTVDGKGRKMSKSLGNVMSPQQVVNKLGADILRLWVA 635



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 15/91 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGH+   I+ D++ +   L G D  +  G D HG        QK+ K  Q   
Sbjct: 59  YANGDIHIGHSVNKILKDIIIKAKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGQ--- 115

Query: 67  VTTKVFVDQNSRNFRDMADV-LDISYDDFIR 96
              KV   +  +  R+ A   ++    DFIR
Sbjct: 116 ---KVSAAEFRQKCREYAKTQVEGQKADFIR 143


>gi|297625601|ref|YP_003687364.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921366|emb|CBL55919.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 1086

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 20/263 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNP--DGSKAKF---WPADLHVIGKDILR---FHAIYWPAF 278
           ++  W D+ +      GY   P  +GS+ KF   +PAD      D  R   +  +  P  
Sbjct: 558 VIDAWFDSGSMSFAQWGY---PWVEGSQEKFEQHFPADFICEAIDQTRGWFYTMMTVPTL 614

Query: 279 LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +   +    K+V   G IL + G K+SK LGN++ PI ++++ G DA+R+F+    +   
Sbjct: 615 VFGESAY--KRVLCLGHILAEDGRKMSKHLGNILLPIPLMDDHGADAVRWFMAAAGSPWS 672

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCS 395
                   L++ V   +      +  +S+     D+  DG  P        D  + S   
Sbjct: 673 ARRVGPTTLQEVVRKVMLTYWNTVAFQSLYARANDWTPDGDAPQVAQRQVLDRWLASATQ 732

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ ++ + ++N    R  A +   + E+  ++  +     ++   D     L+   E +
Sbjct: 733 QLVVDVTDALENYDTQRYGALISGFIDEMSNWYVRRS----RRRFWDGDVGALWTLHETL 788

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  L+    P +  K++  +F
Sbjct: 789 EVLTRLMCPLAPFITEKVWQDMF 811


>gi|291515868|emb|CBK65078.1| valyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 878

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSH----GFILHK-GEKISKSLG 308
           ++P +  V G DI+ F    W A ++ A      +K FS+    G +  K G K+SK LG
Sbjct: 484 YYPTNDLVTGPDIIFF----WVARMIMAGYEYRGEKPFSNVYFTGIVRDKIGRKMSKQLG 539

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           N  DP+E+IE+ G D +R  ++   + G D  +D+
Sbjct: 540 NSPDPLELIEKFGADGVRMAMLISSSAGNDVMFDE 574


>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082064|sp|B0U0I3|SYC_FRAP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 459

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+Y+     Y +   HIGHA   I  DV+ R+ +  G DV F     +   KI K A   
Sbjct: 23  KMYVCGITVYDDC--HIGHARTNIAFDVINRYFKYRGFDVTFVRNITDIDDKIIKRANEN 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDI 89
           G TT   V++  ++  D  D L+I
Sbjct: 81  GETTDKLVERTIKSMHDAFDKLNI 104


>gi|126666975|ref|ZP_01737951.1| leucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628691|gb|EAZ99312.1| leucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 862

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 12/180 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA 
Sbjct: 32  KPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++    L   YD    + T +  ++   +  + ++ +KG +YK
Sbjct: 92  ANKTAPAKWTYSNIEYMKNQLKQLGFGYDWSRELATCKPDYYRWEQWFFARLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
              +  +   D+    +++V  G     G     +  P QW      F R++ Y ++LL+
Sbjct: 152 KMSTVNWDPVDQTVLANEQVVDGRGWRSGALVEKKAIP-QW------FIRITNYAEQLLN 204


>gi|126658904|ref|ZP_01730047.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619854|gb|EAZ90580.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 959

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 31/255 (12%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD+++ G D  R  F +    +  ++   P  K V +HGFIL  KG K+SKSLGN +D
Sbjct: 562 YPADIYLEGSDQHRGWFQSSLLTSVAVNGIAPY-KTVLTHGFILDEKGYKMSKSLGNTVD 620

Query: 313 PIEVIE---------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           P  VI            G D LR + V  +    D    K  LK+   +D+   I N  +
Sbjct: 621 PNVVINGGKNQKQEPPYGADVLRLW-VSSVDYSSDVPLGKTILKQL--SDIYRKIRN-TA 676

Query: 364 RSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHR--ALAQ 416
           R +   L D+D   P   A +     E D  +L   + V  E+ +  +     R     Q
Sbjct: 677 RFLLGNLHDFD---PKRDAVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQ 733

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              +V   + Y D  K   L  ++PD  R  +   V    I  LA  +   +  +A  I+
Sbjct: 734 NFCVVDLSNFYLDIAKD-RLYISHPDSMRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIW 792

Query: 475 DIL-FVADENRCFQS 488
             L +   E   FQ+
Sbjct: 793 QFLPYETSEKSVFQA 807


>gi|320582633|gb|EFW96850.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia angusta
           DL-1]
          Length = 1045

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 10/95 (10%)

Query: 254 KFWPADLHVIGKDILRF--HAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
           KF+P  +   G DIL F    +      ++  +P  K+VF H  +   +G K+SKSLGNV
Sbjct: 593 KFYPMSMLETGWDILFFWVSRMIMLGIKMTGTVPF-KEVFCHSLVRDAQGRKMSKSLGNV 651

Query: 311 IDPIEVIEEVGVDALRYFLV------REIACGKDG 339
           IDP +VI  + ++ L   L+      REI   K G
Sbjct: 652 IDPTDVIHGISLEDLHKQLLAGNLDSREIEKAKAG 686



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           HIGHA  + I D L R++R+ G  VLF  G D           +AG+ T+  V++N
Sbjct: 138 HIGHALTVAIQDSLIRYNRMKGKTVLFLPGFD-----------HAGIATQSVVEKN 182


>gi|307191176|gb|EFN74873.1| Isoleucyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 934

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 21/233 (9%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  L    P    +F HGF +  K  K+SKS+GNV++  
Sbjct: 562 ADLYLEGMDQCRGWFQSSLLTSIALQGRSPY-NALFVHGFAVDDKASKMSKSIGNVVNSE 620

Query: 315 EVIE---------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           E+ +           GVD LR+++     C          L +  +  +      LV R 
Sbjct: 621 EITKGGENLNKNPAYGVDTLRWWVASH-GCQHSQVPVTTTLLRESHESIQK--LRLVLRF 677

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL----V 421
           +  +L  Y+  I     +   D+ +L    +  +EI+   +N L H     +I+     V
Sbjct: 678 LLGVLHSYNEGITIEPEYVHLDKYMLHALYQYNKEIQNLYENYLYHHVCKLIINFLTNTV 737

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           S V  +    + +  +  +P R +  + VT +++  LA  +   VP LA +++
Sbjct: 738 SPVYCHLIKDRLYCDEVESPTRLA-AMEVTCDILTVLARSIAPVVPHLAEEVW 789



 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 18/111 (16%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAAQNAGVTTKVFV 73
           Y N  PH+GHA   I+ D+  R   + G  V +  G D HG  I  K   N      + +
Sbjct: 66  YANGLPHMGHAINKILKDITLRSKIITGRRVHYVPGWDCHGLPIEQKVLSNTKNVNPLEI 125

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            + +R F   +D +    + FI              W  ++D  +   GCY
Sbjct: 126 RRKARKF--ASDAIAKQREIFIS-------------WGTVADWNE--SGCY 159


>gi|311113747|ref|YP_003984969.1| isoleucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945241|gb|ADP41535.1| isoleucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 1115

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)

Query: 221 PDDP---------QYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHV--IGKDIL 268
           PDDP         + ++ VW D+ +       Y  +N D  +  + PAD  V  IG+   
Sbjct: 574 PDDPTGKSTMRRVEDVLDVWFDSGSMPYAQVHYPFENKDWFENHY-PADFIVEYIGQTRG 632

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRY 327
            F+ ++  A  L  + P  K V SHG +L   G+K+SKSL N  D  EV++  G DA+R+
Sbjct: 633 WFYTLHILATALF-DRPAFKNVVSHGIVLGSDGQKMSKSLRNYPDVSEVLDRDGSDAMRW 691

Query: 328 FLVRE-IACGKDGFYDKDGLKKRV 350
           FL+   I  G +    + G+++ V
Sbjct: 692 FLMSSPILRGGNLIVTEQGIREGV 715


>gi|315501280|ref|YP_004080167.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Micromonospora sp. L5]
 gi|315407899|gb|ADU06016.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Micromonospora sp. L5]
          Length = 870

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++  W  +        G+  +PD   A+ +P DL   G DI+R    A    + L    L
Sbjct: 526 VLDTWATSSLTPQIVGGWETDPD-LFARVFPMDLRPQGHDIIRTWLFATVARSHLEHGAL 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           P    V S   +    +K+SKS GNV+ P+ ++E  G DA+RY+     A GK G 
Sbjct: 585 PWHTAVLSGWILDPDRKKMSKSKGNVVTPMALLERNGSDAVRYW----AANGKPGM 636



 Score = 41.2 bits (95), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KER  +Y I T     + + H+GH +     D +ARF R+ G  V +  G D++G    +
Sbjct: 57  KERSDVYAIDTPPPTVSGELHMGHVFSYTHTDTVARFQRMRGRTVFYPMGWDDNGLPTER 116

Query: 61  AAQN 64
             QN
Sbjct: 117 RVQN 120


>gi|241667314|ref|ZP_04754892.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 459

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+Y+     Y +   HIGHA   I  DV+ R+ +  G DV F     +   KI K A   
Sbjct: 23  KMYVCGITVYDDC--HIGHARTNIAFDVINRYFKYRGFDVTFVRNITDIDDKIIKRANEN 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDI 89
           G TT   V++  ++  D  D L+I
Sbjct: 81  GETTDQLVERTIKSMHDAFDKLNI 104


>gi|255527131|ref|ZP_05394018.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186580|ref|ZP_06854983.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509182|gb|EET85535.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296049027|gb|EFG88458.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 799

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 56/125 (44%), Gaps = 7/125 (5%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKSLGNV-IDP 313
           P  +     +I+R    Y     L     +P K +   GF+L  KGEKISKS  N    P
Sbjct: 479 PMGMRTQAHEIIRTWTFYTIVRSLFHTGKIPWKDIMLCGFVLAKKGEKISKSKNNAPSSP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+IE    DALRY+       G D  + +  LK   +    N + N  S  + M L+DY
Sbjct: 539 KELIERHSADALRYW-ASSAKLGTDTMFSEAELK--TSKRFLNKLWNAASFCI-MQLEDY 594

Query: 374 DGMIP 378
           DG  P
Sbjct: 595 DGSNP 599



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 24/35 (68%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          HIGH +    A+++ARFHR+ G +V +  G D++G
Sbjct: 50 HIGHIFSYTQAEIIARFHRMQGENVFYPFGFDDNG 84


>gi|39998226|ref|NP_954177.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81701102|sp|Q747X9|SYI_GEOSL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39985172|gb|AAR36527.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 923

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 14/111 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PD-GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+  ++      L+N P+ GS     PA++++ G D  R  FH+    +     
Sbjct: 530 ILDVWFDSGVSHAAV---LENRPELGS-----PANMYLEGSDQHRGWFHSSLLASVGTRG 581

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             P  ++V +HGF++   G K+SKS+GNV+ P EVI++ G + LR ++  +
Sbjct: 582 VAPY-REVLTHGFVVDGSGRKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQ 631



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV----TT 69
           Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I  +  +N G     TT
Sbjct: 58  YANGHIHIGHALNKILKDIILKSKRMQGFDAPYVPGWDCHGLPIELQVEKNLGSKKHETT 117

Query: 70  KVFVDQNSRNFRD 82
           K+ + +  R + +
Sbjct: 118 KLQMRKQCREYAE 130


>gi|126456514|ref|YP_001075817.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312630|ref|ZP_04811647.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|126230282|gb|ABN93695.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135869|gb|EES22272.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 973

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 574 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 629

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 630 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 673


>gi|257057892|ref|YP_003135724.1| leucyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256587764|gb|ACU98897.1| leucyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 949

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL++     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 54  DKLFVQDMFPYPSGAGLHVGHPLGFIGTDVFARYNRMIGRNVLHTMGFDAFGLPAEQYAV 113

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
             G   +   + N + +      L + +D+  R
Sbjct: 114 QTGTHPRTTTEANIKRYLAQIRRLGLGHDERRR 146



 Score = 40.8 bits (94), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 36/208 (17%)

Query: 294 GFILHKGE-------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           G   +KGE       K+ KSL NV+ P E+ E  G D  R++   E++ G       D  
Sbjct: 703 GKFFYKGEEVKQEYGKMGKSLKNVVTPDEIAENYGADTFRFY---EMSMGP-----LDVS 754

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +     D+  G    + R   +++ +  G +    A TE  E  L    R +  +RE+  
Sbjct: 755 RPWATKDVV-GAHRFLQRLWRLVVNENTGELRV--ADTELSEEDLRQLHRTIAGVREDYA 811

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           N   + A A++I L + V + + + K        P                L ++L    
Sbjct: 812 NLRFNTAGAKLIELNNYVTKTYGSAKATPRGLAEP----------------LVLMLAPMC 855

Query: 467 PKLANKIFDILFVADE--NRCFQSLDQR 492
           P +A +++  L  ++   +  F ++D+R
Sbjct: 856 PHIAEELWHRLGHSESLVHGPFPTVDER 883


>gi|229821074|ref|YP_002882600.1| tRNA synthetase valyl/leucyl anticodon-binding [Beutenbergia
           cavernae DSM 12333]
 gi|229566987|gb|ACQ80838.1| tRNA synthetase valyl/leucyl anticodon-binding [Beutenbergia
           cavernae DSM 12333]
          Length = 902

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM  W  +  +     G+LD+ D   A+ +P DL   G+DI+R    A    + L    L
Sbjct: 526 IMDTWATSSLSPQIVGGWLDDAD-LFARVFPMDLRPQGQDIIRTWLFATVLRSHLEFGEL 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           P      S   +    +K+SKS G+   P+ ++E+ G DA+RY+       G D  +D
Sbjct: 585 PWEHAAISGWILDPDRKKLSKSKGHATTPMSLLEDHGADAVRYWAA-SARLGTDASFD 641



 Score = 43.5 bits (101), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ERE +Y I T     +   H+GH +     DV+ARF R+ G +V +  G D++G    + 
Sbjct: 50  EREDVYSIDTPPPTVSGSLHVGHVFSYTHTDVVARFQRMRGREVFYPMGWDDNGLPTERR 109

Query: 62  AQN 64
            QN
Sbjct: 110 VQN 112


>gi|254490969|ref|ZP_05104151.1| isoleucyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463878|gb|EEF80145.1| isoleucyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 933

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 8/121 (6%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +   + + P  K V +HGF +  +G+K+SKS GNV+ P
Sbjct: 551 PADLYLEGSDQHRGWFQSSLLTSVATTDSAPY-KAVLTHGFTVDAQGKKMSKSKGNVVAP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +VI+ +G D +R ++      G+   +  D + KR  AD    I N  +R +   L D+
Sbjct: 610 QKVIKNLGADIIRLWVAATDYSGE--MHVSDEILKRT-ADSYRRIRN-TARYLLSNLNDF 665

Query: 374 D 374
           D
Sbjct: 666 D 666



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGRPLFVLHDGPPYANGDIHIGHAVNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELN 105

Query: 62  AQNAGVTTKVFVDQNSRNFRD-----MADVLDISYDDFIR 96
            +      K  V   ++ FRD      A  +D   +DF R
Sbjct: 106 VEKK--VGKPGVKVTAKEFRDACRQYAAKQVDGQREDFKR 143


>gi|110667612|ref|YP_657423.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
 gi|109625359|emb|CAJ51782.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 497

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 31/208 (14%)

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH-GFILHKGEKISKSLGNVIDPIEVI 317
           D+HV G+D++  H     A   +A      + + H G +   G+K+S S+GN++   + +
Sbjct: 242 DIHVGGRDLMFPHHENEVAQSEAATDQQFARYWLHVGLLQSAGDKMSSSIGNILTIKQAL 301

Query: 318 EEVGVDALRYFLV-----REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           +E GV+ +R F +      E   G+    +      R+N            R+  M +  
Sbjct: 302 DEHGVNVIRMFYLATAYRSEQTLGQSELAEATERWDRLN------------RAYEMAV-- 347

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQ 431
            D    T       DES+ S  S         M N   +  A+A ++ L + V+R+ D+Q
Sbjct: 348 -DASNSTDAYAIVEDESLRSSVSETKSSFTSAMNNDFNVREAIASLLKLATSVNRHLDSQ 406

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLA 459
           + ++ +          LY+ +E    L 
Sbjct: 407 ERYDYRG---------LYMAIEAFEALG 425


>gi|31432951|gb|AAP54522.1| Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group]
 gi|62733612|gb|AAX95729.1| valyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 1056

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWP 276
           K+  DP  ++  W  +    L+  G+ D+     + F+P  +   G DIL F    +   
Sbjct: 571 KLDQDPD-VLDTWFSSGLFPLSVLGWPDS-TADLSSFYPTSVLETGLDILFFWVARMVMM 628

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             LL  ++P  +KV+ H  I    G K++K LGNVIDPI+VI  + ++ L   L      
Sbjct: 629 GMLLGGDVPF-QKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLD 687

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +    K+G KK    D  NGI    + ++   L  Y
Sbjct: 688 PSELEKAKEGQKK----DFPNGIPECGTDALRFALISY 721



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHA  + I D + R+ R+ G + L+  G D           +AG+ T+V V++     
Sbjct: 132 HIGHAITVAIEDAMIRWRRMSGYNALWVPGMD-----------HAGIATQVVVEKRLMRD 180

Query: 81  RDMADVLDISYDDFI 95
           R+++   D+  D F+
Sbjct: 181 RNLSR-HDLGRDKFL 194


>gi|323309046|gb|EGA62275.1| Vas1p [Saccharomyces cerevisiae FostersO]
          Length = 854

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 377 VLDTWFSSGLWPFSTLGW---PEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTG 433

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +D L   L++
Sbjct: 434 SVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQ 482


>gi|315924529|ref|ZP_07920748.1| leucine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622059|gb|EFV02021.1| leucine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 803

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 32/198 (16%)

Query: 244 YLDN------PDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS- 292
           Y+DN       D  K K+W   D +  G + +  H +Y   W  FL    +   K+ ++ 
Sbjct: 508 YIDNHNDECLADMDKLKYWLSVDWYNGGMEHVTRHLLYSRFWHQFLYDIGVVPTKEPYAK 567

Query: 293 ---HGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
               G IL   GEK+SKS GNV++P ++I E G D LR +++      K   +  +G+K 
Sbjct: 568 RTAQGLILGSDGEKMSKSKGNVVNPNDIIAEYGADTLRTYIMFIGDYEKPAPWSDNGIKG 627

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                          R +  + K  D M+     F++  E+ +    + ++ + E+ +  
Sbjct: 628 -------------CRRFLDRVWKLQD-MVVEGDTFSKELENDM---HKTIKRVSEDYEAM 670

Query: 409 LIHRALAQVISLVSEVDR 426
             + A+A ++SL++  +R
Sbjct: 671 KFNTAIAALMSLLNHFNR 688



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 9/179 (5%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y      YP+    H+GH       +V+AR  R+ G +VLF  G D  G      A
Sbjct: 31  RPKFYGLVEFPYPSGVGLHVGHVRAYTSLEVIARKRRMQGYNVLFPIGFDAFGLPTENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +   D N   F      +  S+  D  + TT+  +    + ++ ++   G  Y
Sbjct: 91  IKTGKHPREVTDHNIEVFTQQLKAIGYSFDWDHTVDTTDPAYFKWTQWIFLQMYKHGLAY 150

Query: 121 KG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           K   Y  + +       N+D      DG+  +   +PV  ME++ +F ++  Y +KLL 
Sbjct: 151 KDHTYVNFCTGCKVVLSNED----FRDGK-CDRCGSPVVQMEKDVWFLKIREYAEKLLQ 204


>gi|121609069|ref|YP_996876.1| isoleucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121553709|gb|ABM57858.1| Isoleucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 945

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 27/264 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ +++ +      +PD        ADL++ G D  R  FH+    A  L    
Sbjct: 552 ILEVWFDSGSSF-SHVLRGTHPDVRHDSGPEADLYLEGHDQHRGWFHSSLLLASALQGRA 610

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  + + +HGF +  +G K+SKSLGN I+P E+ + +G + +R ++      G D   D+
Sbjct: 611 PY-RGLLTHGFTVDSQGRKMSKSLGNGIEPQEINQRLGAEIIRLWVAASDYSG-DIAGDE 668

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVL 398
             L + V+A         +  ++  +L +     P       G   E D   L+  + + 
Sbjct: 669 KILARVVDAY------RRIRNTLRFLLANVSDFEPAQDSVPFGQMLEIDRYALTRAAELQ 722

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD-----RASTVLY-V 450
            E+  + +    H  +A++    SE     Y DA K   L  T P       A T L+ +
Sbjct: 723 AEVLAHYEIYEFHPVVAKLQLYCSEDLGGFYLDALKD-RLYTTAPKSLARRSAQTALHRI 781

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
           T  ++R +A  L +F  + A K+F
Sbjct: 782 THAMLRWMAPFL-SFTAEEAWKLF 804



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           Y N Q H+GHA   I+ D++ +  +L+G D L+  G D HG  I  A
Sbjct: 65  YANGQIHMGHAVNKILKDMITKARQLEGFDALYVPGWDCHGLPIENA 111


>gi|30681405|ref|NP_192770.2| isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase,
           putative [Arabidopsis thaliana]
          Length = 1190

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +P D    G D  R    ++   +LS  L   P  K +  +G +L + G+K++K L N
Sbjct: 582 KNFPGDFVAEGLDQTR--GWFYTLMVLSTALFEKPAFKNLICNGLVLAEDGKKMAKKLRN 639

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRS 365
              P+EVI+E G DA+R +L+       +    K     G+ K V     N    LV  +
Sbjct: 640 YPPPLEVIDEYGADAVRLYLINSPVVRAEPLRFKKEGVLGVVKDVFLPWYNAYRFLVQNA 699

Query: 366 VSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +     +PT  A  +S    D+ I S    +++ +RE M    ++  + +++  +
Sbjct: 700 KRLETEGGVPFVPTDLATIQSANILDQWIHSATQSLVRFVREEMDAYRLYTVVPRLLKFL 759

Query: 422 SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   +       LK +T  D   T L     V+     ++  F P     ++  L
Sbjct: 760 DNLTNIYVRFNRKRLKGRTGEDDCHTALSTLFNVLLTSCKVMAPFTPFFTETLYQNL 816


>gi|77361341|ref|YP_340916.1| valine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|90101546|sp|Q3II73|SYV_PSEHT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76876252|emb|CAI87474.1| valine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 951

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 62/301 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +     +T G+  N D  K  F P+D+ V G DI+ F    W A ++   L  
Sbjct: 469 VLDTWFSSALWTFSTQGWPANTDDLKT-FHPSDVLVTGFDIIFF----WVARMIMMTLHF 523

Query: 285 --------PLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P K V+  G I    G+K+SKS GNV+DP+++I+ +              
Sbjct: 524 IKDENGKPQVPFKTVYVTGLIRDDNGDKMSKSKGNVLDPLDMIDGIELEELVQKRTGNMM 583

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D + L+   N    N 
Sbjct: 584 QPKLAAKIEKDTRKVFAGGIEAHGTDALRFTLAAMASTGRDINWDMNRLEGYRN--FCNK 641

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           + N  SR V M  ++ D    T      + +D  IL      ++   E++ N     A  
Sbjct: 642 LWN-ASRYVLMNTEEQDCGFATDAQKELSLADRWILGQFESTVKSYTEHLDNYRFDLAAN 700

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +         D Y +  KP  L K N  +        + V+  L  L+   +P +   I
Sbjct: 701 TLYEFTWHQFCDWYLELTKP-VLFKGNEAQQRGTRNTLITVLESLLRLMHPMMPYITETI 759

Query: 474 F 474
           +
Sbjct: 760 W 760



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GHA++  I D L RF R+ G + L+  GTD           +AG+
Sbjct: 34 SIMIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTD-----------HAGI 82

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 83 ATQMLVER 90


>gi|89070286|ref|ZP_01157605.1| isoleucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044125|gb|EAR50286.1| isoleucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 969

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 19/132 (14%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G+ D +  R+ FD           I+ VW D+ + +       D  DG++     AD+++
Sbjct: 563 GVVDPAEYRQVFD-----------ILDVWFDSGSTHAFV--LRDRDDGTEDGI--ADVYL 607

Query: 263 IGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
            G D  R  FH+    A       P  + V + GF L  KG K+SKSLGN + P +VI++
Sbjct: 608 EGTDQHRGWFHSSLLQACGTIGRAPY-RNVVTAGFTLDAKGNKMSKSLGNTVAPDDVIKQ 666

Query: 320 VGVDALRYFLVR 331
            G D LR ++ +
Sbjct: 667 YGADILRLWVAQ 678



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--------QKIAKAAQNAG 66
           Y N   HIGHA   ++ D++ R H++ G D  +  G D HG        +K  +  Q+  
Sbjct: 65  YANGHLHIGHALNKVLKDMVVRSHQMMGRDARYIPGWDCHGLPIEWKIEEKYRQKGQDKD 124

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
               +   Q  R+F   A  +D+  ++F R
Sbjct: 125 EVPVLEFRQECRDF--AAGWVDVQREEFKR 152


>gi|324990662|gb|EGC22598.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 930

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++      ++ P+ +    +PADL++ G D  R  F++    +       
Sbjct: 524 IMDVWFDSGSSWNGVV--VNRPELT----YPADLYLEGSDQYRGWFNSSLITSVANHGVA 577

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K++ S GF L  KGEK+SKSLGN I P +V +  G + LR ++ 
Sbjct: 578 PY-KQILSQGFALDGKGEKMSKSLGNTIAPSDVEKHFGAEILRLWVT 623



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 32/150 (21%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   H+GHA   I  D++ R   + G    +  G D HG  I +     GV  K    
Sbjct: 58  YANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQVLAKQGVKRKEL-- 115

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-----------------------LWK 111
                  D+ + L++  D  +   EK+  D  R+                       ++ 
Sbjct: 116 -------DLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTPDYEAAQIRVFG 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++ KG IY+G    ++S   E+   + E+
Sbjct: 169 EMAKKGYIYRGAKPVYWSWSSESALAEAEI 198


>gi|311694204|gb|ADP97077.1| valyl-tRNA synthetase [marine bacterium HP15]
          Length = 950

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 29/177 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S AI  PN     H+GHA++  I D L RF R+ G + L+T GTD           +AG+
Sbjct: 34  SIAIPPPNVTGSLHMGHAFQHTIMDTLTRFKRMQGRNALWTVGTD-----------HAGI 82

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFI-RTTEKRHHDTCRILW--KKISDKGDIYKGCY 124
            T++ V++      D     D+  ++FI R  + + H    I    +++ +  D     +
Sbjct: 83  ATQMVVERKLAAEEDKTR-HDLGREEFIKRIWDWKEHSGGTITRQIRRLGNSVDWDNERF 141

Query: 125 S---GWYSLRDEAY---YNDDEVYKGA-----DGQYYNAQHN-PVQWMEEEGYFFRL 169
           +   G+Y    E +   Y++  VY+G      D + + A  +  V+  EE+G+F+ L
Sbjct: 142 TMDDGFYKAVQEVFIRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEEKGFFWHL 198



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 18/105 (17%)

Query: 235 LTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK--- 289
            ++ L T G L  P+ ++    F P D+ V G DI+ F    W A ++   +   K    
Sbjct: 475 FSSALWTFGTLGWPEITERLKTFHPTDVLVTGFDIIFF----WVARMIMMTMHFMKNEDG 530

Query: 290 --------VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
                   V+  G I  + G+K+SKS GNVIDP+++I+ + +D L
Sbjct: 531 TPQVPFHTVYVTGLIRDEHGDKMSKSKGNVIDPLDMIDGISLDDL 575


>gi|288941820|ref|YP_003444060.1| valyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897192|gb|ADC63028.1| valyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 947

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 94/197 (47%), Gaps = 43/197 (21%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-- 222
           ++ R++   +  ++  E+     +P   +N    ++++ ++D  +SR+ + WG +IP   
Sbjct: 382 WYVRVAPLAEPAIAAVENGDIRFVPDNWKNTYFEWMRN-IQDWCISRQIW-WGHRIPAWY 439

Query: 223 DPQYIMYV----------------------------WIDALTNYLTTTGYLDNPDGSKAK 254
           D +  +YV                            W  +     +T G+ ++ +  K  
Sbjct: 440 DSEGNVYVGRSEDEVRAKHGFGPEVTLRQDEDVLDTWFSSALWPFSTLGWPEDTERLKT- 498

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFILHK-GEKISKSLG 308
           F+P  + V G DI+ F    W A ++   L     +P ++V+ HG +  K G+K+SKS G
Sbjct: 499 FYPTSVLVTGFDIIFF----WVARMIMMGLKFMGDVPFREVYIHGLVRDKNGDKMSKSKG 554

Query: 309 NVIDPIEVIEEVGVDAL 325
           NV+DPI++I+ + +++L
Sbjct: 555 NVLDPIDLIDGIDLESL 571



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKIAKAAQNAGVTTK------V 71
           H+GHA++  I D L R+HR+ G   L+  GTD  G   Q + +    A   T+       
Sbjct: 51  HMGHAFQDTIMDALTRYHRMKGEQTLWQAGTDHAGIATQMVVERLIEAEGQTRHDYGRDA 110

Query: 72  FVDQ-----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+++            +R  R M   LD +++ F  T ++   +  R ++ ++ ++G IY
Sbjct: 111 FIERIWEWKAESGGAITRQLRRMGASLDWAHERF--TMDEGLSEAVREVFVRLYEEGLIY 168

Query: 121 KG 122
           +G
Sbjct: 169 RG 170


>gi|257052712|ref|YP_003130545.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691475|gb|ACV11812.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 889

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 20/181 (11%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  ARF RL G DVL   G D  G     AA+    
Sbjct: 42  YVLAMFPYTSGNLHMGHVRNYTITDAYARFERLRGEDVLHPMGWDSFGLPAENAAEERDT 101

Query: 68  TTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG- 122
             + +    +D  +  F+ M       ++  I T +  ++   + L+K+  ++G + +  
Sbjct: 102 NPRDWTMDCIDSMTEQFKSMG--FGYDWEREITTCDPDYYRWNQWLFKRFREEGLVERQA 159

Query: 123 -----CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                C S    L DE    +DEV    +         P+   E + +F  ++ Y ++L 
Sbjct: 160 SELNWCPSCETVLADEQVEGEDEVCWRCE--------TPIDTREMDQWFLTITDYAEELF 211

Query: 178 S 178
            
Sbjct: 212 E 212



 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 249 DGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHK 299
           D  +A  W P D +V G +    H +Y   F        LL       + + + G +L +
Sbjct: 518 DTERADDWMPVDQYVGGIEHAVMHLLYARFFTKVLDDVDLLDGVREPFENLTNQGMVLGE 577

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            G K+SKS  N + P  ++EE G D  R F++      K+  +  +G++ 
Sbjct: 578 DGNKMSKSGDNGVSPARIVEEYGADTARLFIMEAAQPEKEFAWSAEGVQS 627


>gi|196008044|ref|XP_002113888.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
 gi|190584292|gb|EDV24362.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
          Length = 850

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 44/277 (15%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           A+  KL+  Y S+  + LP+E+   +         +L++   T     +  +D    M V
Sbjct: 521 AHITKLVREYGSNCWWNLPMEKLFPI---------ELAMKHYTSPAKFRRGED---TMDV 568

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPK 288
           W D+ T++ T    + + DG       ADL+V G D  R  FH+    + +  +  P  K
Sbjct: 569 WFDSGTSWATV---MKDQDGV------ADLYVEGTDQHRGWFHSSLITSTVTQSKAPY-K 618

Query: 289 KVFSHGFIL-HKGEKISKSLGNVIDPIEVIE------EVGVDALRYFL-----VREIACG 336
            + +HGF++     K+SKSLGN++ P E I        +G D LR ++       +++C 
Sbjct: 619 GILTHGFVMDENNRKMSKSLGNIVYPDEAITGTKKKVGLGADVLRLWVAASGYAADLSCS 678

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                      ++V       +GNL   +++    +++ M+       E D+ +L    +
Sbjct: 679 NSILERFGESLRKVRNSARFLLGNLYDFNIASNEVEHNQML-------EIDQYVLHRTLK 731

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQK 432
             ++   +  N     A   +++ V +++  YF+A K
Sbjct: 732 FYEDTISSYDNMQFAPATRHIMNFVNTDLATYFEAIK 768



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA------------ 62
           Y N   H+GH    ++ D++ R   L G  V +  G D HG  I   A            
Sbjct: 86  YANGDLHMGHLLNKVLKDIINRHKVLQGYKVHYKPGWDCHGLPIELKALKGDNYDNNKMP 145

Query: 63  -----QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                + A    +  +++  ++F+    + +  ++D  +TT+K +      ++ ++  KG
Sbjct: 146 AIQIRETAKAFAEATIEEQMKSFKRWGVMAN--WNDVYKTTDKDYEANQLQVFYEMYKKG 203

Query: 118 DIYKG 122
            IY+G
Sbjct: 204 YIYRG 208


>gi|77165740|ref|YP_344265.1| isoleucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433992|ref|ZP_05047500.1| isoleucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123730629|sp|Q3J8W1|SYI_NITOC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76884054|gb|ABA58735.1| Isoleucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090325|gb|EDZ67596.1| isoleucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 940

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  +    P  + V +HGF +  KG+K+SKS GNV+ P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLLTSVAIRGTAPY-RMVLTHGFTVDAKGKKMSKSQGNVVAP 616

Query: 314 IEVIEEVGVDALRYFLV 330
            +V+  +G D LR ++ 
Sbjct: 617 QQVMGSLGADILRLWVA 633



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 19/138 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG------ 55
           + R +  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG      
Sbjct: 46  RGRPRFILHDGPPYANGAIHIGHAVNKILKDIIVKSKSLSGFDAPYVPGWDCHGLPIELN 105

Query: 56  --QKIAKAAQNAGVTT---------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
             +K+ K  +   V +         +  V+    +F  +  + D  +  ++    +   D
Sbjct: 106 VEKKVGKPGRKIDVASFRRACRDYARKQVNAQREDFERLGVLGDWCH-PYLTMDYQFEAD 164

Query: 105 TCRILWKKISDKGDIYKG 122
             R L  KI +KG ++KG
Sbjct: 165 VIRTL-GKIIEKGHLHKG 181


>gi|298507162|gb|ADI85885.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 923

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 14/111 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDN-PD-GSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           I+ VW D+  ++      L+N P+ GS     PA++++ G D  R  FH+    +     
Sbjct: 530 ILDVWFDSGVSHAAV---LENRPELGS-----PANMYLEGSDQHRGWFHSSLLASVGTRG 581

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             P  ++V +HGF++   G K+SKS+GNV+ P EVI++ G + LR ++  +
Sbjct: 582 VAPY-REVLTHGFVVDGSGRKMSKSVGNVVAPEEVIKKYGAEILRLWVAAQ 631



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGV----TT 69
           Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I  +  +N G     TT
Sbjct: 58  YANGHIHIGHALNKILKDIILKSKRMQGFDAPYVPGWDCHGLPIELQVEKNLGSKKHETT 117

Query: 70  KVFVDQNSRNFRD 82
           K+ + +  R + +
Sbjct: 118 KLQMRKQCREYAE 130


>gi|297849262|ref|XP_002892512.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338354|gb|EFH68771.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1091

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 255 FWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P DL V GKD+++ H  +  +    L AN   P+ +  +G I+   EK+SKS GN   
Sbjct: 664 WYPLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGIRCNGHIMLNSEKMSKSTGNFRT 723

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             + IEE    A R+ L    A   DG  D + + +  NA
Sbjct: 724 LRQAIEEFSATATRFSL----ADAGDGVDDANFVFETANA 759



 Score = 40.0 bits (92), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 29/61 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  EK + +    Y N   HIGHA+ +   D  + +HRL G +VL   G    G  I  +
Sbjct: 41  KPGEKFFSTFPFPYMNGYLHIGHAFSLSKVDFASAYHRLRGANVLLPFGFHCTGMPIKAS 100

Query: 62  A 62
           A
Sbjct: 101 A 101


>gi|302869817|ref|YP_003838454.1| tRNA synthetase valyl/leucyl anticodon-binding [Micromonospora
           aurantiaca ATCC 27029]
 gi|302572676|gb|ADL48878.1| tRNA synthetase valyl/leucyl anticodon-binding [Micromonospora
           aurantiaca ATCC 27029]
          Length = 870

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           ++  W  +        G+  +PD   A+ +P DL   G DI+R    A    + L    L
Sbjct: 526 VLDTWATSSLTPQIVGGWETDPD-LFARVFPMDLRPQGHDIIRTWLFATVARSHLEHGAL 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           P    V S   +    +K+SKS GNV+ P+ ++E  G DA+RY+     A GK G 
Sbjct: 585 PWHTAVLSGWILDPDRKKMSKSKGNVVTPMALLERNGSDAVRYW----AANGKPGM 636



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KER  +Y I T     + + H+GH +     D +ARF R+ G  V +  G D++G    +
Sbjct: 57  KERSDVYAIDTPPPTVSGELHMGHVFSYTHTDTVARFQRMRGRTVFYPMGWDDNGLPTER 116

Query: 61  AAQN 64
             QN
Sbjct: 117 RVQN 120


>gi|300694515|ref|YP_003750488.1| methionyl-tRNA synthetase protein (metg) [Ralstonia solanacearum
          PSI07]
 gi|299076552|emb|CBJ35883.1| putative methionyl-trna synthetase protein (metG) [Ralstonia
          solanacearum PSI07]
          Length = 496

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 1/96 (1%)

Query: 1  MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          MK R++  +   +  PN   H+GH A   +  D+LAR  R  G  V   + TD +   + 
Sbjct: 1  MKARKQYVLIPVMPTPNGPLHLGHIAGPFLKMDILARHLRRRGETVALVSATDPYETHVL 60

Query: 60 KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
            A       +     N R   D  + LDI YD FI
Sbjct: 61 PRADEQNKPVEQICADNHRAIHDCLNALDIHYDAFI 96


>gi|226198545|ref|ZP_03794112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225929468|gb|EEH25488.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 973

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 574 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 629

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 630 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 673


>gi|195441879|ref|XP_002068689.1| GK17911 [Drosophila willistoni]
 gi|194164774|gb|EDW79675.1| GK17911 [Drosophila willistoni]
          Length = 1047

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK 299
           PD +K    F+P  L   G DIL F    W A +      L   LP  ++V+ H  +   
Sbjct: 594 PDQTKDLQTFYPTSLLETGHDILFF----WVARMVFFGQKLLGKLPF-REVYLHPMVRDA 648

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLV------REIACGKDG 339
            G K+SKSLGNVIDP++VI+ + ++ L   L+      REI   K G
Sbjct: 649 HGRKMSKSLGNVIDPMDVIKGITLEGLHAQLIGSNLDPREIEKAKAG 695


>gi|124810112|ref|XP_001348763.1| valine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497663|gb|AAN37202.1| valine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1090

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 10/77 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P  +   G+DIL F    W A ++  +L L KK+      LH      +GEK+SKS G
Sbjct: 580 FFPNTILETGQDILFF----WVARMVMVSLHLMKKLPFKTIYLHAMIRDSRGEKMSKSKG 635

Query: 309 NVIDPIEVIEEVGVDAL 325
           NV+DP+++I+ + ++ L
Sbjct: 636 NVVDPLDIIDGISLNKL 652


>gi|81428370|ref|YP_395370.1| isoleucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123728658|sp|Q38XM0|SYI_LACSS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78610012|emb|CAI55060.1| Isoleucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 928

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 35/172 (20%)

Query: 179 YYESHPEFILP--IERRNEVISFVKSGLKDLSLSRKTFDW--------GIKIPDDP---- 224
           Y E   E I P  IER  ++  F + G      S   F+W        G   P  P    
Sbjct: 465 YAEDGTEIITPETIERVAQL--FAEHG------SNVWFEWDAKDLLPAGFTHPGSPNGEF 516

Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFL 279
              + IM VW D+ +++       D         +PADL + G D  R  F++    +  
Sbjct: 517 TKEKDIMDVWFDSGSSHQAVLAARDE------LTYPADLILEGSDQYRGWFNSSLITSVA 570

Query: 280 LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +    P  K V S GF+L   G K+SKSLGN I P ++I+++G D +R ++ 
Sbjct: 571 VGEVSPY-KAVISQGFVLDGNGRKMSKSLGNTILPEKIIKQMGADIVRLWVA 621



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 26/56 (46%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           + N   H+GHA      D++ R+  ++G    F  G D HG  I +A    G+  K
Sbjct: 58  FANGNIHMGHALNKTSKDIIVRYKSMNGFRAPFVPGWDTHGLPIEQALAKKGIKRK 113


>gi|51473867|ref|YP_067624.1| valyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826287|sp|Q68W50|SYV_RICTY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51460179|gb|AAU04142.1| Valine translase [Rickettsia typhi str. Wilmington]
          Length = 814

 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 39/249 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P DL     +I+R  A Y    + L    LP    + S   +     K+SKS GNV+
Sbjct: 486 KLFPMDLRPQAHEIIRTWAFYTILKSHLHQNILPWKNIMVSGWCLAEDRSKMSKSKGNVL 545

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P +++E  G D +RY+       G D  Y +D +K      L N + N  ++ VS+   
Sbjct: 546 VPEKLLERYGADVIRYWSANS-KLGADTAYSEDIMKN--GKRLVNKLWN-AAKFVSI--- 598

Query: 372 DYDGMIPTPGAFTESDESILSVCS---RVLQEIRENMQNQLI-----------HRALAQV 417
            +D +         S++  +S+C+   ++  E  + + N+L+           +   A  
Sbjct: 599 HFDKLT--------SEDKKVSLCAIKEKITHEFDQWIINKLVALVKLATNALQNYEYANA 650

Query: 418 ISLVSE------VDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           I L  +       D Y +  K   ++    NP    + +  +  V++ L  L   F+P +
Sbjct: 651 IYLTEKFFWSIFCDNYLEISKTRSYDEGNKNPQGQYSSILTSYHVMQTLLKLFAPFMPHI 710

Query: 470 ANKIFDILF 478
             +++ IL+
Sbjct: 711 TEELYQILY 719


>gi|237736433|ref|ZP_04566914.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421475|gb|EEO36522.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 933

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 15/108 (13%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           IM VW D+  ++   L T G L +         PAD+++ G D  R  F      +   +
Sbjct: 531 IMDVWFDSGVSHRSVLETRGELLHR--------PADMYLEGSDQHRGWFQTSLLTSIGST 582

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            + P  KK+ +HGF+   +G+K+SKS+GNV+ P +VI+  G D LR +
Sbjct: 583 HDAPY-KKILTHGFVNDGEGKKMSKSVGNVVVPADVIKVYGADILRLW 629



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ ++ RL G +  +  G D HG  I
Sbjct: 59  YANGDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPI 102


>gi|254458347|ref|ZP_05071773.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085183|gb|EDZ62469.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 816

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 22/185 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK YI +   +P+ + H+GH     I+D  AR++R    +VL   G D  G     AA
Sbjct: 29  KKEKKYILSMFPFPSGRLHMGHVRNYSISDAFARYYRQQNFNVLHPIGFDSFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS-------- 114
              G   K +   N    +     L  S+      +++R   T   L+ K          
Sbjct: 89  IKNGSHPKGWTYDNIDYMKKEFVSLGFSF------SKERELATSDELYTKFEQGFIIDMY 142

Query: 115 DKGDIY--KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +KG +Y  KG  +  +   D+    +++V    DG  +     P+   +   Y+F+++ Y
Sbjct: 143 EKGLLYREKGLLN--WCPHDQTVLANEQV---VDGCCWRCD-TPIVKKDMNQYYFKITQY 196

Query: 173 QDKLL 177
            D+LL
Sbjct: 197 ADELL 201



 Score = 43.9 bits (102), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+ + G +L  G K+SKS GN +DP  +IE+ G D  R F++
Sbjct: 571 KLLTQGMVLKDGAKMSKSKGNTVDPDAIIEKYGADTARLFIL 612


>gi|45184857|ref|NP_982575.1| AAR034Wp [Ashbya gossypii ATCC 10895]
 gi|44980466|gb|AAS50399.1| AAR034Wp [Ashbya gossypii ATCC 10895]
          Length = 1098

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 21/127 (16%)

Query: 227 IMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------ 279
           ++  W  +     +T G+ D  PD S   F+P  +   G DIL F    W A +      
Sbjct: 619 VLDTWFSSGLWPFSTLGWPDKTPDMST--FYPFSMLETGWDILYF----WVARMILLGIK 672

Query: 280 LSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV------RE 332
           L+ N+P   +VF H  +   +G K+SKSLGNV+DP+ VI    ++ L   L       RE
Sbjct: 673 LTGNVPF-NEVFCHSLVRDAQGRKMSKSLGNVVDPLYVITGSSLEELHATLSKGNLDPRE 731

Query: 333 IACGKDG 339
           +   K G
Sbjct: 732 VEKAKAG 738


>gi|50556490|ref|XP_505653.1| YALI0F20218p [Yarrowia lipolytica]
 gi|49651523|emb|CAG78462.1| YALI0F20218p [Yarrowia lipolytica]
          Length = 1047

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 20/107 (18%)

Query: 248 PDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILH- 298
           PD +K    F+P  +   G DIL F    W A +      L+ ++P  ++VF+H  +   
Sbjct: 588 PDKTKDMETFYPMTMLETGWDILFF----WVARMIMLGIKLTGDIPF-REVFTHSLVRDA 642

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFL------VREIACGKDG 339
           +G K+SKSLGNVIDP++VI  + +  L   L       RE+   +DG
Sbjct: 643 QGRKMSKSLGNVIDPLDVISGIPLKDLHAKLHQGNLDPREVKKAEDG 689



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           HIGH   + + D L RFHR+ G  VL+  G D  G
Sbjct: 140 HIGHGLTVALQDGLIRFHRMKGKTVLYVPGFDHAG 174


>gi|76817250|ref|YP_335493.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254262772|ref|ZP_04953637.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254301827|ref|ZP_04969270.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|76581723|gb|ABA51197.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157811646|gb|EDO88816.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254213774|gb|EET03159.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 973

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 574 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 629

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 630 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 673


>gi|53716620|ref|YP_105643.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642268|ref|ZP_00441027.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|124381802|ref|YP_001024052.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126447796|ref|YP_001078558.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|166999605|ref|ZP_02265442.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254173999|ref|ZP_04880662.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254200439|ref|ZP_04906804.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254204465|ref|ZP_04910818.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356692|ref|ZP_04972967.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823796|sp|Q62CD5|SYI2_BURMA RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|52422590|gb|AAU46160.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|124289822|gb|ABM99091.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126240650|gb|ABO03762.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147748051|gb|EDK55126.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147754051|gb|EDK61115.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025719|gb|EDK83842.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160695046|gb|EDP85016.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238523379|gb|EEP86818.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243064434|gb|EES46620.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 967

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|332172861|gb|AEE22115.1| isoleucyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 942

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +     + P  K+V +HGF +  KG+K+SKSLGN I P 
Sbjct: 561 ADLYLEGSDQHRGWFMSSLMTSVATKGHAPY-KQVLTHGFTVDGKGKKMSKSLGNTIAPQ 619

Query: 315 EVIEEVGVDALRYFLV 330
           +V  ++G D LR ++ 
Sbjct: 620 QVTNKLGADILRLWVA 635


>gi|282890603|ref|ZP_06299126.1| hypothetical protein pah_c022o204 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499600|gb|EFB41896.1| hypothetical protein pah_c022o204 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 1035

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 16/198 (8%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVID 312
           PAD    G D  R    ++   +LS  L   P  K V  +G IL + G K+SK L N  D
Sbjct: 538 PADFIAEGLDQTR--GWFYTLTILSTALFDQPAFKNVIVNGIILAEDGAKMSKRLRNYPD 595

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANGIGNLVSRSVSM 368
           P  V+E+ G DA+R +++   A   D   + + G++   +++   + N     V+ +   
Sbjct: 596 PTTVVEKYGADAVRLYMMHSPAVRADDLCFSEKGVELVLRQILIPMWNAYSFFVTYARIY 655

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                      PGA    D+ +LS+ ++++ ++ E M    +  A+   ++ V ++  ++
Sbjct: 656 NWTPSANEDLKPGAVI--DQWLLSLLNKLVHQVEEGMDAYDLSAAVEPFVTFVDQLTNWY 713

Query: 429 ---DAQKPWELKKTNPDR 443
                ++ W+ ++ N DR
Sbjct: 714 IRRSRRRFWQ-EEANEDR 730


>gi|167957152|ref|ZP_02544226.1| valyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 373

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K  + +G +L   G+K+SKS GNVI+PIE++ + G DALR  +V   +  ++        
Sbjct: 29  KDTYFNGLVLDENGQKMSKSKGNVINPIEILSQYGSDALRLGIVANRSAAQNQALSMG-- 86

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           K     +  N + N +SR +   L D      TP A + +D  I+S  ++   EI
Sbjct: 87  KIIAGRNYCNKLWN-ISRFIGDKLGDDFTPSNTPQAKSLADHWIISELNKTCLEI 140


>gi|54307796|ref|YP_128816.1| isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400140|sp|Q6LUL1|SYI_PHOPR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46912219|emb|CAG19014.1| putative Isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 954

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +     +  +G  A     DL++ G D  R  F +    +  +    P  
Sbjct: 544 VWFDSGVTHFSVVDSREEYNGHSA-----DLYLEGSDQHRGWFQSSLVSSVAMKGKAPY- 597

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 598 NQVLTHGFVVDGQGRKMSKSVGNVVAPKDVTNKLGADILRLWVA 641


>gi|310659180|ref|YP_003936901.1| isoleucyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|308825958|emb|CBH21996.1| Isoleucyl-tRNA synthetase 2 (Isoleucine--tRNA ligase 2) (IleRS 2)
           [Clostridium sticklandii]
          Length = 1034

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F+++   +  +    P  K V  +  IL K G+K+SKS GN 
Sbjct: 541 ELFPADFICEGIDQTRGWFYSLIAISTFVMGKSPY-KNVLVNDLILDKDGKKMSKSRGNT 599

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP E+ ++ G D LR++L+          +D D LK+
Sbjct: 600 VDPFEMFDKYGADVLRWYLLYVSPAWTPTKFDVDALKE 637


>gi|157368943|ref|YP_001476932.1| isoleucyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980058|sp|A8G9L4|SYI_SERP5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157320707|gb|ABV39804.1| isoleucyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 938

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 25/213 (11%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYW 275
           +K+PD     + VW D+ + + +        +G  A     D+++ G D  R  F +   
Sbjct: 525 VKVPD----TLDVWFDSGSTHSSVVDVRPEFNGHGA-----DMYLEGSDQHRGWFMSSLM 575

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +  +    P  K+V +HGF +  +G K+SKS+GN I P +V+ ++G D LR ++     
Sbjct: 576 ISTAMKGKAPY-KEVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLGGDILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-- 392
            G+    D+  + KR +AD    I N    +   +L + +G  P+       +  +L   
Sbjct: 635 TGEIAVSDE--ILKR-SADSYRRIRN----TARFLLANLNGFEPSTDCVAPEEMVVLDRW 687

Query: 393 VCSRVL---QEIRENMQNQLIHRALAQVISLVS 422
              R L   Q+I +   N   H  + +++   S
Sbjct: 688 AVGRALAAQQDIEKAYANYDFHEVVQRLMQFCS 720


>gi|222478802|ref|YP_002565039.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451704|gb|ACM55969.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 906

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 20/180 (11%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ R+ G DVL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMRGDDVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVF----VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG- 122
             + +    +D      + M       +D  + T    ++   + L+++  + G + +  
Sbjct: 96  NPRDWTFDCIDTMKGQMQSMG--FGYDWDREVTTCTPDYYQWNQWLFRRFHEAGLVERRD 153

Query: 123 -----CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
                C S    L DE    DDE+    D         PV+  + + +F  ++ Y D+LL
Sbjct: 154 AEVNWCPSCETVLADEQVEGDDELCWRCD--------TPVETRDLDQWFLEITEYADELL 205



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + + G +  +GEK+SKS GN + P  +++E G D  R F+++     +D  + ++G+K 
Sbjct: 577 NLLAQGMVQLEGEKMSKSKGNTVSPQRIVDEYGADTARLFIMQAAQPERDFDWAEEGVKS 636


>gi|126307099|ref|XP_001375630.1| PREDICTED: similar to putative utrophin [Monodelphis domestica]
          Length = 1017

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 22/118 (18%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W ++ T++      L  P+        ADL++ GKD L   FH+    +     
Sbjct: 599 QDILDIWFESGTSW---NCVLQGPEQR------ADLYLEGKDQLGGWFHSSLLISVATRK 649

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  K V  HGF +  KGEK+SKSLGNVI P  VI            GVD LR+++ 
Sbjct: 650 KAPF-KTVLVHGFTVGEKGEKMSKSLGNVISPDFVINGGEDLSKDPPYGVDILRWWIA 706



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG-----QKI 58
           +++  +     Y N + H+GHA   ++ D+  RF  + GL V F  G D HG     + +
Sbjct: 111 KQEFCLHDGPPYANGEAHVGHALNKVLKDISNRFQMMRGLKVHFVPGWDCHGLPIELKAL 170

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++  + A   + + + + +R F + A  ++     FIR
Sbjct: 171 SELGEKAQNLSPMEIRKKARAFAEAA--IEKQKSAFIR 206


>gi|119899197|ref|YP_934410.1| valyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166225519|sp|A1K9L8|SYV_AZOSB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|119671610|emb|CAL95523.1| ValS protein [Azoarcus sp. BH72]
          Length = 998

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 12/78 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISKSL 307
           + P+ + V G DI+ F    W A +      ++  +P  K V+ HG I   +G+K+SKS 
Sbjct: 548 YLPSTVLVTGFDIIFF----WVARMVMMTKHITGKIPF-KHVYVHGLIRDAEGQKMSKSK 602

Query: 308 GNVIDPIEVIEEVGVDAL 325
           GNV+DPI++I+ +G+D L
Sbjct: 603 GNVLDPIDLIDGIGIDEL 620



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GH +   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 52 HMGHGFNQTIMDALTRYHRMRGDNTLWQPGTD-----------HAGIATQIVVERQ 96


>gi|126443976|ref|YP_001062864.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126223467|gb|ABN86972.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 967

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|319787827|ref|YP_004147302.1| leucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466339|gb|ADV28071.1| leucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 883

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 37  DKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDI 119
               V    +  +N  + R    +L  + D   +F   T + +    R ++ ++  KG  
Sbjct: 97  IKNKVAPAKWTYKNIEHMRSQLKLLGYAIDWSREFATCTPEYYVHEQR-MFVRLMRKGLA 155

Query: 120 Y-KGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y K     W  + D+    +++V  G     G     +  P QW      F R++ Y  +
Sbjct: 156 YRKNAVVNWDPV-DQTVLANEQVIDGRGWRSGALVEKREIP-QW------FLRITDYAQE 207

Query: 176 LLSYYESHP 184
           LL   +  P
Sbjct: 208 LLDGLDELP 216


>gi|294943524|ref|XP_002783900.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
            ATCC 50983]
 gi|239896731|gb|EER15696.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
            ATCC 50983]
          Length = 1213

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 18/249 (7%)

Query: 248  PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
            P  +K KF   +PAD    G D  R  F+ +   A  L  N P  K +  +G IL   G+
Sbjct: 841  PFENKEKFEENFPADFVAEGLDQTRGWFYTMTVIATHL-FNQPAFKNLIVNGLILAADGK 899

Query: 302  KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLK---KRVNADLANG 357
            K+SK L N  DP EV +  G DA+R ++        +   + ++G++   K V   L N 
Sbjct: 900  KMSKRLKNYPDPTEVFDRYGADAVRMYMCNSPVVRAEPLKFREEGVRDTVKEVFLPLYNA 959

Query: 358  IGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRA 413
               LV  +     ++    +P      +S    D  I +    +L+  R  +++  ++  
Sbjct: 960  YRFLVQETCRFEKQENTKFVPDRAYIHKSTNPTDHWIYATSQELLKYTRTELESYRLYTI 1019

Query: 414  LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLAN 471
            + +++S + ++  ++  +   +  +   D+ +T+  L    +V+  L I+L    P +  
Sbjct: 1020 VGKLVSFLDDLTNWY-IRMNRDRMRGGVDKENTLESLNTLYDVMLNLTIVLAPITPFITE 1078

Query: 472  KIFDILFVA 480
             I+  L +A
Sbjct: 1079 HIYQNLRLA 1087


>gi|217031695|ref|ZP_03437199.1| hypothetical protein HPB128_155g8 [Helicobacter pylori B128]
 gi|216946542|gb|EEC25142.1| hypothetical protein HPB128_155g8 [Helicobacter pylori B128]
          Length = 502

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           F P D ++ G +    H +Y   F         L  + P  K++ + G +L  G K+SKS
Sbjct: 214 FMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPF-KQLITQGMVLKDGAKMSKS 272

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK------KRVNADLANGIGN 360
            GNV+ P E++++ G DA R F++      K+  ++   L+      KR+  D AN I  
Sbjct: 273 KGNVVSPKEILKKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL-YDKANAITP 331

Query: 361 LVSR 364
             S+
Sbjct: 332 TTSK 335


>gi|197335481|ref|YP_002155222.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|254782453|sp|B5FA60|SYI_VIBFM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|197316971|gb|ACH66418.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 952

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  +    P  ++V +HGF++   G K+SKS+GNV+ P 
Sbjct: 571 ADLYLEGSDQHRGWFQSSLISSVAMKGKAPY-RQVLTHGFVVDGNGRKMSKSIGNVVAPK 629

Query: 315 EVIEEVGVDALRYFL-----VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +V  ++G D LR ++       E+A   +         +R+       + NL   + +  
Sbjct: 630 DVTNKLGADILRLWVASTDYTNEVAVSDEILKRSADAYRRIRNTARFFLANLSGFNPATD 689

Query: 370 LKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   + M+         AF    E I S     L E+ +    +L+H    ++ S   +V
Sbjct: 690 IVPAEEMVALDRWAVGRAFAAQQEIIKSYDEYNLHEVTQ----RLMHFCSIEMGSFYLDV 745

Query: 425 --DRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKI 473
             DR + A+K    +++      T LY  VE ++R +A ++     ++ N++
Sbjct: 746 IKDRQYTAKKGGHAQRS----CQTALYYIVEALVRWMAPIMSFTADEIWNEM 793



 Score = 37.0 bits (84), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 26/57 (45%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|4538961|emb|CAB39785.1| isoleucine-tRNA ligase-like protein [Arabidopsis thaliana]
 gi|7267729|emb|CAB78155.1| isoleucine-tRNA ligase-like protein [Arabidopsis thaliana]
          Length = 1254

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGN 309
           K +P D    G D  R    ++   +LS  L   P  K +  +G +L + G+K++K L N
Sbjct: 582 KNFPGDFVAEGLDQTR--GWFYTLMVLSTALFEKPAFKNLICNGLVLAEDGKKMAKKLRN 639

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRS 365
              P+EVI+E G DA+R +L+       +    K     G+ K V     N    LV  +
Sbjct: 640 YPPPLEVIDEYGADAVRLYLINSPVVRAEPLRFKKEGVLGVVKDVFLPWYNAYRFLVQNA 699

Query: 366 VSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +     +PT  A  +S    D+ I S    +++ +RE M    ++  + +++  +
Sbjct: 700 KRLETEGGVPFVPTDLATIQSANILDQWIHSATQSLVRFVREEMDAYRLYTVVPRLLKFL 759

Query: 422 SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   +       LK +T  D   T L     V+     ++  F P     ++  L
Sbjct: 760 DNLTNIYVRFNRKRLKGRTGEDDCHTALSTLFNVLLTSCKVMAPFTPFFTETLYQNL 816


>gi|84500590|ref|ZP_00998839.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391543|gb|EAQ03875.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 855

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 2/123 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     
Sbjct: 28  MPGKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVVARYKRATGHNVLHPMGFDAFGMPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G   + +   N          L  S D      T +  ++   + L+    +KG 
Sbjct: 88  AAMANGGHPRDWTYSNIDTMVGQMKPLGFSLDWTRMFATCDPEYYGQQQALFLDFLEKGL 147

Query: 119 IYK 121
           +Y+
Sbjct: 148 VYR 150



 Score = 37.7 bits (86), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 50/210 (23%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD---------GLKKRVNA 352
           K+SKS  NV+DP+++I + G D  R+F++ +    +D  +            G   R+ +
Sbjct: 627 KMSKSKNNVVDPVQIIADYGADTARWFVLSDSPPERDVEWTAAGAEAAAKHLGRVYRLAS 686

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           DL +G                           E+DE ++    + + ++   + +   + 
Sbjct: 687 DLTDGEAET----------------------DEADEHLMREMHKTVHDVTLGIDSFGFNA 724

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A++    + + +                RA +V       I+ LA L+    P LA +
Sbjct: 725 AIAKLYGFTNTIAK---------------SRAGSVARRM--AIKTLAQLMSPMTPHLAEE 767

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           I+ +L    E    Q+   +  P  ++  T
Sbjct: 768 IWQML--GGEGLISQAPWPKADPAMLVEDT 795


>gi|110640042|ref|YP_680252.1| isoleucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966463|sp|Q11NV4|SYI_CYTH3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110282723|gb|ABG60909.1| Isoleucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 1110

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 4/94 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F  ++  + +L   +   K V ++G +L K G K+SK +GNV++
Sbjct: 610 YPADFIAEGVDQTRGWFFTLHAISGMLYDKVAF-KNVIANGLVLDKNGNKMSKRVGNVVN 668

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P E I++ G DA R++++       +  ++ DG+
Sbjct: 669 PFETIDKYGPDATRWYMITNAPPWDNLKFNLDGI 702


>gi|323304853|gb|EGA58611.1| Vas1p [Saccharomyces cerevisiae FostersB]
          Length = 842

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 412 VLDTWFSSGLWPFSTLGW---PEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTG 468

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +D L   L++
Sbjct: 469 SVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQ 517


>gi|319775102|ref|YP_004137590.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317449693|emb|CBY85900.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 924

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 510 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 558

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 559 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 619 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 671

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 672 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 704


>gi|297489134|ref|XP_002697393.1| PREDICTED: valyl-tRNA synthetase-like, partial [Bos taurus]
 gi|296474311|gb|DAA16426.1| valyl-tRNA synthetase-like [Bos taurus]
          Length = 999

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 110/282 (39%), Gaps = 78/282 (27%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL     +W A +      L+  LP  K+V+ H  +    G K+SKSL
Sbjct: 548 FYPGTLLETGHDIL----FFWVARMVMLGLKLTGKLPF-KEVYLHAIVRDAHGRKMSKSL 602

Query: 308 GNVIDPIEVIE-------------------------------------EVGVDALRYFLV 330
           GNVIDP++VI                                      E G DALR+ L 
Sbjct: 603 GNVIDPLDVIHGVTLQGLHDQLLNSNLDPSEVEKAKEGQKADFPTGIPECGTDALRFGLC 662

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIG-----NLVSRSVSMILKDY-DGMIPTPGAFT 384
              + G+D           +N D+   +G     N +  +    L+    G +P+P +  
Sbjct: 663 AYTSQGRD-----------INLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSEP 711

Query: 385 ESDESILS--VCSRVLQEIRENMQNQLIHRALAQVIS-----LVSEVDRYFDAQKPW--E 435
              ES++   + SR+ + +R + Q    +   A   +     L    D Y +  KP    
Sbjct: 712 GGRESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLECLKPVLNG 771

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   + A   LY  ++V  +   LL  F+P +  ++F  L
Sbjct: 772 VDQVAAECARQTLYTCLDVGLR---LLSPFMPFVTEELFQRL 810


>gi|149911069|ref|ZP_01899697.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805895|gb|EDM65883.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 939

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+ + + +         G++      DL++ G D  R  F +    +  +    P  
Sbjct: 535 VWFDSGSTHFSVVDARKEYAGAEI-----DLYLEGSDQHRGWFQSSLMISTAIHGKAPY- 588

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  KG K+SKS+GNV+ P +V+  +G D LR+++ 
Sbjct: 589 KEVLTHGFVVDAKGRKMSKSIGNVMAPQDVMNRLGGDVLRWWVA 632


>gi|173164|gb|AAA35207.1| valyl-tRNA synthetase [Saccharomyces cerevisiae]
          Length = 1104

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 627 VLDTWFSSGLWPFSTLGW---PEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTG 683

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +D L   L++
Sbjct: 684 SVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQ 732


>gi|15604286|ref|NP_220802.1| leucyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226188|sp|Q9ZDB1|SYL_RICPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|3860978|emb|CAA14878.1| LEUCYL-TRNA SYNTHETASE (leuS) [Rickettsia prowazekii]
 gi|292572035|gb|ADE29950.1| Leucyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 828

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 30/59 (50%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
          + K Y+   + YP+ + HIGH     I DV+ARF  + G +VL   G D  G     AA
Sbjct: 26 KPKYYVLEMLPYPSGKIHIGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENAA 84


>gi|309973536|gb|ADO96737.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 941

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 576 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 636 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 688

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 689 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|110638824|ref|YP_679033.1| valyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281505|gb|ABG59691.1| valyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 880

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 73/356 (20%), Positives = 140/356 (39%), Gaps = 76/356 (21%)

Query: 176 LLSYYESHPEFIL----------PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---- 221
           + S+ + HPE +           P + +N    ++   +KD  +SR+ + WG +IP    
Sbjct: 364 MRSFMDKHPEVLSSVMNDEIKLHPAKFKNTYKHWI-DNIKDWCISRQLW-WGQRIPAWYL 421

Query: 222 DDPQYIMYV--------------------------------WIDALTNYLTTTGYLDNPD 249
            D QYI+ +                                W  +    ++      +P+
Sbjct: 422 SDGQYIVALNETEALAKAKALTSNAALTLADLKQDEDVLDTWFSSWLWPISVFDGFKDPN 481

Query: 250 GSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFIL-----HKGEK 302
               K++ P D  V   +IL F    W A ++ A      +K FS+ ++       +G K
Sbjct: 482 NEDIKYYYPTDDLVTAPEILFF----WVARMIMAGYAFRGEKPFSNVYLTGIVRDKQGRK 537

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN  DP+++I + G D +R+ ++     G D  +D    ++  N    N + N  
Sbjct: 538 MSKSLGNSPDPLDLITKYGADGVRFGMLLSSPAGNDLLFDDKYCEQGRN--FTNKLWNAF 595

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                 ++K ++     P     S E + +  +  L EI ++     +  AL  V  LV 
Sbjct: 596 R-----LIKGWEIDKSLPYVNAASVEWLNARINASLVEIEDHFSKYRLSDALMSVYKLV- 649

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKIF 474
                +D    W L+   P+    +   T E    +  ++  ++  F+P +  +++
Sbjct: 650 -----WDDLCAWYLEMIKPEFGKPIDAKTYEETLAIFEEILKIVHPFMPFITEELW 700


>gi|198422215|ref|XP_002122808.1| PREDICTED: similar to Valyl-tRNA synthetase CG4062-PA [Ciona
           intestinalis]
          Length = 1271

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 14/89 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSL 307
           KF+P +L   G D++     +W A ++   + L  +V  H  +LH       G K+SKS+
Sbjct: 601 KFYPLNLMETGNDLI----FFWVARMVMMGMKLTGEVPFHNVLLHPLIRDNMGRKMSKSV 656

Query: 308 GNVIDPIEVIEEVG----VDALRYFLVRE 332
           GN+IDP++VI+       ++AL +  +++
Sbjct: 657 GNIIDPMDVIDGASKKKRIEALEFMYLKK 685


>gi|167820031|ref|ZP_02451711.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 872

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|153937977|ref|YP_001389549.1| leucyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166231599|sp|A7G9T9|SYL_CLOBL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152933873|gb|ABS39371.1| leucine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317646|gb|ADF98023.1| leucine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 813

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 36/239 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 516 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMS 574

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P + I+E G D  R +L+      + G +  D +K          IG  V R
Sbjct: 575 KSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIK---------SIGKFVDR 625

Query: 365 SVSMILKDYDGMIPTP---GAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISL 420
            V  IL++    I       +  + DE  L+ V    ++ I E++     + ++A+++  
Sbjct: 626 -VERILENAREEIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEF 684

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + + +Y  +     L+  +  R S + ++T         LL  F P  A + ++++ +
Sbjct: 685 TNALSKYLGSDT---LRNASFLRESIIDFIT---------LLAPFAPHFAEEQWELIGI 731



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 15/180 (8%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             G+  K   D   +N   M   L       ++++ + T    ++   + L+ K+ +KG 
Sbjct: 91  KTGIHPK---DSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y K     W    +    N+  +    DG+      N V     E +F +++ Y D+LL
Sbjct: 148 AYKKKAPVNWCPSCNTVLANEQVL----DGKCERCDSN-VDKKNLEQWFLKITDYADELL 202


>gi|67458815|ref|YP_246439.1| isoleucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536736|sp|Q4UMD8|SYI_RICFE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|67004348|gb|AAY61274.1| Isoleucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 1094

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 42/205 (20%)

Query: 293 HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 614 HGVILDATGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 673

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V  I                   S 
Sbjct: 674 TLRLFIKPIWNAYHFFTMYANADSLKGELNFASQNVLDIYI----------------LSK 717

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLY 449
           L +    ++E  +N   Q  + A+++   +++         + W+ +K  +   A   LY
Sbjct: 718 LKIAVNKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKSEKDADKQNAYNTLY 777

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
             +E    +AI + A VP ++  I+
Sbjct: 778 SCLET---MAIAMSALVPMISEAIY 799


>gi|115449027|ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|46805524|dbj|BAD16975.1| putative isoleucyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537824|dbj|BAF10207.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|222623772|gb|EEE57904.1| hypothetical protein OsJ_08590 [Oryza sativa Japonica Group]
          Length = 1058

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       D  +      +PAD+++ G D  R  F +    +   +   P
Sbjct: 621 MDVWFDSGSSWAAVLAQRDGLN------FPADIYLEGSDQHRGWFQSSLLTSIATTGKAP 674

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
               V +HGF+L  KG K+SKSLGNV+DP +VI
Sbjct: 675 Y-SSVITHGFVLDEKGFKMSKSLGNVVDPEKVI 706


>gi|6321531|ref|NP_011608.1| Vas1p [Saccharomyces cerevisiae S288c]
 gi|1711655|sp|P07806|SYV_YEAST RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|1323141|emb|CAA97097.1| VAS1 [Saccharomyces cerevisiae]
 gi|151943371|gb|EDN61684.1| mitochondrial valyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190406886|gb|EDV10153.1| valyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|256269409|gb|EEU04706.1| Vas1p [Saccharomyces cerevisiae JAY291]
 gi|259146597|emb|CAY79854.1| Vas1p [Saccharomyces cerevisiae EC1118]
 gi|285812287|tpg|DAA08187.1| TPA: Vas1p [Saccharomyces cerevisiae S288c]
          Length = 1104

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 627 VLDTWFSSGLWPFSTLGW---PEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTG 683

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +D L   L++
Sbjct: 684 SVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQ 732


>gi|289523254|ref|ZP_06440108.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503797|gb|EFD24961.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 823

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 47/270 (17%)

Query: 233 DALTNYLTTTGYL---DNPDGSKAKF------W-PADLHVIGKDILRFHAIYWPAFL-LS 281
           D L  +  ++ Y     +P   KA F      W P D ++ G +    H IY   F  + 
Sbjct: 491 DTLDTFFCSSWYFLRFCSPWCDKAPFDDEVHYWTPVDQYIGGIEHACLHLIYSRFFTKVL 550

Query: 282 ANLPLPK------KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A++ + +       + + G ++  G K+SKS GNV+DP ++I+  G D  R F++     
Sbjct: 551 ADMGMIRFREPFVNLLTQGMVIKDGAKMSKSKGNVVDPDDIIKRYGADTARLFILFASPP 610

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +   G++         G+   +SR    +    + +        ++D + LS+ S
Sbjct: 611 DKDLEWSDQGVE---------GVYRFLSRVWRYMEDKIEDL-------KKADPARLSMES 654

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW------ELKKTNPDRAS--TV 447
             L+E ++    + IHR + ++++   EV+R F+           E+    P   +  ++
Sbjct: 655 --LREGKKRNLKRRIHRTI-ELVTRDIEVERQFNTAVARFMELFNEMYSCEPKDGADWSL 711

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    EV   L + L  FVP    ++++ L
Sbjct: 712 LREAAEV---LVVCLSPFVPHFCEELWERL 738



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 36/90 (40%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y      YP+   H+GH     I D++ARF  + G +VL   G D  G     AA
Sbjct: 29  KRPKFYCLEMFPYPSGALHMGHLRNYSIGDLMARFLTMRGYNVLHPMGFDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              GV    +   N          +  SYD
Sbjct: 89  IKYGVHPFEWTWNNIERMTAQLKSMGCSYD 118


>gi|209519277|ref|ZP_03268078.1| valyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209500289|gb|EEA00344.1| valyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 959

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     ++ G+ +  +  K  F P+ + V G DI+ F    W A ++      
Sbjct: 472 VLDTWFSSALVPFSSLGWPNETEELK-HFMPSSVLVTGFDIIFF----WVARMVMMTTHF 526

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +  +P  + V+ HG +   +G+K+SKS GN +DPI++++ +G+DAL
Sbjct: 527 TGKVPF-ETVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDAL 571



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
           H+GHA+   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 60  HMGHAFNQTIMDGLTRYHRMLGENTLWVPGTD-----------HAGIATQIVVERQ 104


>gi|135143|sp|P13503|SYLM_SACDO RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|68519|pir||SYBYMX leucine-tRNA ligase (EC 6.1.1.4) precursor, mitochondrial - yeast
           (Saccharomyces sp.)
 gi|4842|emb|CAA31343.1| unnamed protein product [Saccharomyces douglasii]
          Length = 894

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 2/116 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI     YP+   HIGH    +I+D L RF++  G +V+   G D  G     AA   G+
Sbjct: 50  YILCQFPYPSGVLHIGHLRVYVISDSLNRFYKQRGYNVIHPMGWDAFGLPAENAAIERGI 109

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              ++   N    +   + +  +  +D  + T +  ++   + ++ K+ + G  Y+
Sbjct: 110 NPAIWTRDNIAKMKQQMESMLANFDWDREVTTCDPEYYKFTQWIFLKLFENGLAYR 165


>gi|67594603|ref|XP_665812.1| leucyl-tRNA synthetase  [Cryptosporidium hominis TU502]
 gi|54656650|gb|EAL35579.1| leucyl tRNA synthetase (134.5 kD) (lrs-1) [Cryptosporidium hominis]
          Length = 226

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           REK  I+    Y N + H+GHA+ +  AD  ARF R++  +VLF  G    G  I  +A
Sbjct: 46  REKYMITFPYPYMNGRLHLGHAFTLTKADFQARFQRMNNKNVLFPFGFHCTGMPICASA 104


>gi|330826259|ref|YP_004389562.1| Isoleucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329311631|gb|AEB86046.1| Isoleucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 951

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           Y N Q HIGHA   I+ D++ +  +L+G D L+T G D HG  I  A
Sbjct: 69  YANGQIHIGHAVNKILKDMIVKARQLEGFDALYTPGWDCHGLPIENA 115



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 38/316 (12%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP  +  I++  +++   + G++  + SR T +  +   D   Y     I+ VW D+ 
Sbjct: 511 ELHPRTMEIIDQAADIVE--RGGIE--AWSRVTAEEILGAEDAKHYTKSTDILEVWFDSG 566

Query: 236 TNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKK 289
           + +      T   + + +G +A     DL++ G D  R  FH+    A  +    P  + 
Sbjct: 567 STFWHVMRGTHAGMHHDEGPEA-----DLYLEGHDQHRGWFHSSLLLASAIFGRAPY-RG 620

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           + +HGF +  +G+K+SKSLGN + P +V  ++G + +R +       G     DK  +  
Sbjct: 621 LLTHGFTVDGQGKKMSKSLGNTVSPQQVSGKLGAEIIRLWCAATDYSGDLAIDDK--ILA 678

Query: 349 RVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           RV  D    I N + R +   + D+D     +P  G   E D   L+  + + Q+I  + 
Sbjct: 679 RV-VDAYRRIRNTL-RFLLANVSDFDPATDAVPF-GEMLEIDRYALTRAAELQQDILAHY 735

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIRQL 458
           +    H  +A++    SE     Y D  K   +     +P R  A T LY +T  ++R +
Sbjct: 736 KVYEFHPVVARLQLYCSEDLGGFYLDVLKDRLYTTAAKSPARRSAQTALYQITHAMLRWM 795

Query: 459 AILLQAFVPKLANKIF 474
           A  L +F  + A KIF
Sbjct: 796 APFL-SFTAEEAWKIF 810


>gi|315655136|ref|ZP_07908038.1| valyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315490617|gb|EFU80240.1| valyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 885

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 12/167 (7%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL---HKGEKISKSL 307
           A  +P DL   G+DI+R    +    + L   +LP  +   S G+IL   HK  K+SKS 
Sbjct: 547 AATFPMDLRPQGQDIIRTWLFSTVVRSHLEFGSLPWRQAAIS-GWILDPDHK--KMSKSK 603

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+ P+ ++E+   DA+RY+       G D  +D+  +K  V   LA  + N    ++S
Sbjct: 604 GNVVTPMGLLEKHSSDAVRYWAA-SARLGTDAAFDEGEMK--VGRRLAIKLLNASKFALS 660

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           M   D D ++       E D S+++  + V+    +  +     RAL
Sbjct: 661 MG-GDADLVLDPALVTVEVDRSLIATLAEVITSATKAFEEMNHARAL 706



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +RE +Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    + 
Sbjct: 40  KREAVYSIDTPPPTVSGSLHVGHVFSYTHTDVVARYQRMRGKNVFYPMGWDDNGLPTERR 99

Query: 62  AQN 64
            QN
Sbjct: 100 VQN 102


>gi|312096167|ref|XP_003148586.1| VRS-2 protein [Loa loa]
 gi|307756249|gb|EFO15483.1| VRS-2 protein [Loa loa]
          Length = 604

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKS 306
           KF+P  L   G DIL F    W A +      L+  LP  ++V+ H  I    G K+SKS
Sbjct: 441 KFFPGTLLETGHDILFF----WVARMVFLSQELTGKLPF-QEVYLHAMIRDAHGRKMSKS 495

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA---DLANGIGNLVS 363
           LGNVIDP+ VI  + +  L   L       + G  D   LK+       D  NGI    +
Sbjct: 496 LGNVIDPLNVIHGISLAQLNKML-------ESGNLDPKELKRAKEGQAHDYPNGIPECGT 548

Query: 364 RSVSMILKDY 373
            ++   L +Y
Sbjct: 549 DALRFALINY 558


>gi|296197634|ref|XP_002746360.1| PREDICTED: valyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 1061

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 24/114 (21%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D           +AG+
Sbjct: 140 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSD-----------HAGI 188

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            T+  V++     R +    ++S +DF+R   +         WK+ +  G+IY+
Sbjct: 189 ATQAVVEKQLWKERGVRR-HELSQEDFLREVWQ---------WKE-AKGGEIYE 231



 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 12/81 (14%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFIL-HKGEKISK 305
           A F+P  L   G D+L    ++W   +      L+  LP   KV  H  +   +G K+SK
Sbjct: 605 AHFYPLSLLETGSDLL----LFWVGRMVMLGTQLTGQLPF-SKVLLHPMVRDRQGRKMSK 659

Query: 306 SLGNVIDPIEVIEEVGVDALR 326
           SLGNV+DP ++I  V +  L+
Sbjct: 660 SLGNVLDPRDIISGVEMQVLQ 680


>gi|170755878|ref|YP_001779813.1| leucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121090|gb|ACA44926.1| leucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 813

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 36/239 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 516 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMS 574

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P + I+E G D  R +L+      + G +  D +K          IG  V R
Sbjct: 575 KSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIK---------SIGKFVDR 625

Query: 365 SVSMILKDYDGMIPTP---GAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISL 420
            V  IL++    I       +  + DE  L+ V    ++ I E++     + ++A+++  
Sbjct: 626 -VERILENAREEIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEF 684

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + + +Y  +     L+  +  R S + ++T         LL  F P  A + ++++ +
Sbjct: 685 TNALSKYLGSDT---LRNASFLRESIIDFIT---------LLAPFAPHFAEEQWELIGI 731



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 15/180 (8%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             G+  K   D   +N   M   L       ++++ + T    ++   + L+ K+ +KG 
Sbjct: 91  KTGIHPK---DSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y K     W    +    N+  +    DG+      N V     E +F +++ Y D+LL
Sbjct: 148 AYKKKAPVNWCPSCNTVLANEQVL----DGKCERCDSN-VDKKNLEQWFLKITDYADELL 202


>gi|120437508|ref|YP_863194.1| isoleucyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579658|emb|CAL68127.1| isoleucyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 1134

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +   +   Y  +N +  + K+  AD    G D  R  F+ ++  A ++  ++  
Sbjct: 607 VWFDSGSMPYSQWHYPFENKEKVEDKWRKADFIAEGVDQTRGWFYTLHAIATMIFDDVAY 666

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            K V S+G +L K G+K+SK LGN  DP E I   G DA R++++
Sbjct: 667 -KNVVSNGLVLDKNGQKMSKRLGNAADPFETISVYGPDATRWYMI 710


>gi|91217261|ref|ZP_01254222.1| isoleucyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184604|gb|EAS70986.1| isoleucyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 1135

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 230 VWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +       Y  +N +  +  +  AD    G D  R  F+ ++  A ++  ++  
Sbjct: 607 VWFDSGSMPYAQWHYPFENKEKVENTWRSADFIAEGVDQTRGWFYTLHAIATMIFDDVAY 666

Query: 287 PKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V S+G +L  KG+K+SK LGN  DP E ++  G DA R++++       +  +D DG
Sbjct: 667 -KNVVSNGLVLDKKGQKMSKRLGNAADPFETLKTYGPDATRWYMITNANPWDNLKFDLDG 725

Query: 346 L 346
           +
Sbjct: 726 I 726


>gi|40063059|gb|AAR37915.1| isoleucyl-tRNA synthetase [uncultured marine bacterium 560]
          Length = 923

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           AD+++ G D  R  F +    +  ++   P  ++V +HGF +   G K+SKSLGNVI P 
Sbjct: 548 ADMYLEGSDQHRGWFQSSLITSCAINGRAPY-RQVLTHGFTVDQNGHKMSKSLGNVIPPQ 606

Query: 315 EVIEEVGVDALRYFL 329
           +V+  +G D LR ++
Sbjct: 607 KVVNSLGADILRLWI 621



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--NAGVTTKVF 72
           Y N   HIGHA   ++ DV+ +   L G D  +  G D HG  I    +     V  K+ 
Sbjct: 59  YANGDIHIGHAVNKVLKDVIVKSKTLSGFDAPYVPGWDCHGLPIEHNVEKKKGKVGQKIN 118

Query: 73  VDQNSRNFRDMAD 85
            D      R+ AD
Sbjct: 119 ADDFRAACREYAD 131


>gi|300859175|ref|YP_003784158.1| cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300686629|gb|ADK29551.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206865|gb|ADL11207.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302331429|gb|ADL21623.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308277117|gb|ADO27016.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 465

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 117/325 (36%), Gaps = 69/325 (21%)

Query: 14  AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           A P AQPHIGH    +  D+L R+    G DV F     +   KI + A+  G     +V
Sbjct: 31  ATPQAQPHIGHVRSGVAFDILRRWLLAKGFDVAFVRNVTDIDDKILRKAEEHGRPWWEWV 90

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKR--HHDTCRILW-KKISDKGDIYKGCYSGWYSL 130
               R F    D L +       + E R   H T  + + +++ D G  Y          
Sbjct: 91  STYEREFTWAYDQLGV----LPPSVEPRATGHVTQMVDYMQRLIDNGYAYDA-------- 138

Query: 131 RDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            + + Y D   +  A G  Y +   N V+ ME+                           
Sbjct: 139 -EGSVYFDVSAWTAATGSDYGSLSGNKVEEMEQ--------------------------- 170

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGY 244
                E  +  K G  D +L      W    P +P +    W +    +        T Y
Sbjct: 171 ----GETDNHGKRGSHDFAL------WKAAKPGEPSWPT-PWGEGRPGWHLECSAMATWY 219

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L        +F   D+H  G D+   H     A   +A     +    + ++   GEK+S
Sbjct: 220 L------GGEF---DIHCGGLDLQFPHHENEIAQSHAAGDGFAQYWMHNHWVTMSGEKMS 270

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFL 329
           KSLGNV+    ++E+V    LRY+L
Sbjct: 271 KSLGNVLSVPNILEKVRPVELRYYL 295


>gi|167465762|ref|ZP_02330851.1| leucyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 616

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 4   REKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ A  H+GH       D+L+R+ R+ G +VL   G D  G    + A
Sbjct: 37  KPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMRGYNVLHPMGWDAFGLPAEQHA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G   +    +N   FR     L  SY  D  I TT+  ++   + ++ ++  KG  Y
Sbjct: 97  LDTGEHPRDITVKNINTFRRQIKSLGFSYDWDREISTTDPNYYKWTQWIFIQLYKKGLAY 156



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVF----SHGFILHKG-EKISKSLG 308
           P DL++ G +    H +Y   W   L    +   K+ F    + G IL +  EK+SKS G
Sbjct: 530 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVTTKEPFHKLVNQGMILGENMEKMSKSRG 589

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NV++P  +++E G D LR +
Sbjct: 590 NVVNPDVIVDEYGADTLRLY 609


>gi|319761889|ref|YP_004125826.1| isoleucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116450|gb|ADU98938.1| isoleucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 951

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           Y N Q HIGHA   I+ D++ +  +L+G D L+T G D HG  I  A
Sbjct: 69  YANGQIHIGHAVNKILKDMIVKARQLEGFDALYTPGWDCHGLPIENA 115



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 36/315 (11%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP  +  I++  +++   + G++  + SR T +  +   D   Y     I+ VW D+ 
Sbjct: 511 ELHPRTMEIIDQAADIVE--RGGIE--AWSRVTAEEILGAEDAKHYTKSTDILEVWFDSG 566

Query: 236 TNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKK 289
           + +      T   + + +G +A     DL++ G D  R  FH+    A  +    P  + 
Sbjct: 567 STFWHVMRGTHAGMHHDEGPEA-----DLYLEGHDQHRGWFHSSLLLASAIFGRAPY-RG 620

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           + +HGF +  +G+K+SKSLGN + P +V  ++G + +R +       G     DK  +  
Sbjct: 621 LLTHGFTVDGQGKKMSKSLGNTVSPQQVSGKLGAEIIRLWCAATDYSGDLAIDDK--ILA 678

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMI-PTP-GAFTESDESILSVCSRVLQEIRENMQ 406
           RV  D    I N + R +   + D+D      P G   E D   L+  + + Q+I  + +
Sbjct: 679 RV-VDAYRRIRNTL-RFLLANVSDFDPATDAVPFGEMLEIDRYALTRAAELQQDILAHYK 736

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDR--ASTVLY-VTVEVIRQLA 459
               H  +A++    SE     Y D  K   +     +P R  A T LY +T  ++R +A
Sbjct: 737 VYEFHPVVARLQLYCSEDLGGFYLDVLKDRLYTTAAKSPARRSAQTALYQITHAMLRWMA 796

Query: 460 ILLQAFVPKLANKIF 474
             L +F  + A KIF
Sbjct: 797 PFL-SFTAEEAWKIF 810


>gi|291556445|emb|CBL33562.1| isoleucyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 1049

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 23/236 (9%)

Query: 248 PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           P  +K KF   +PAD      D  R  F+++   + LL    P  K V   G +L K G+
Sbjct: 542 PFENKEKFEQQFPADFISEAVDQTRGWFYSLLAISTLLFNKAPY-KNVIVLGLVLDKDGQ 600

Query: 302 KISKSLGNVIDPIEVIEEVGVDALR-YFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           K+SKS GN +DP E + E G DA+R YF         + F+      K VN      I  
Sbjct: 601 KMSKSKGNAVDPFESLAEHGADAIRWYFYTNSAPWLPNRFH-----AKAVNEGQRKYIST 655

Query: 361 LVSRSVSMIL-KDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRAL 414
           L +     +L  + D    T      S     D+ +LS  + V+  + +N+ N  I  A 
Sbjct: 656 LWNTYAFYVLYANIDNFDATKYTLDASKLGVMDKWLLSRLNTVVGAVDDNLANYRIPEAA 715

Query: 415 AQVISLVSEVDRYF---DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFV 466
             +   V E+  ++     ++ W  + T     A   LY  +  I + +  +  FV
Sbjct: 716 RALQDFVDEMSNWYVRRSRERFWSKELTQDKINAYMTLYTALVTIAKTSAPMTPFV 771



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 17 NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          N +PHIGH    +I D++ R+  + G +V    G D HG
Sbjct: 53 NGKPHIGHVLTRVIKDMIPRYRTMKGYNVPRKAGWDTHG 91


>gi|241766699|ref|ZP_04764539.1| isoleucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241362967|gb|EER58656.1| isoleucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 949

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 22/162 (13%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP     +E  ++  S V+ G  + + SR T +  +   D   Y     I+ VW D+ 
Sbjct: 509 ELHPR---TMEIVDQAASIVEQGGIE-AWSRMTAEEVLGADDAAHYTKSTDILEVWFDSG 564

Query: 236 TNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKK 289
           + +      T G + + +G +A     DL++ G D  R  FH+    A  +    P  + 
Sbjct: 565 STFWHVMRGTHGTMHHDEGPEA-----DLYLEGHDQHRGWFHSSLLLASAIYGRAPY-RG 618

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + +HGF +  +G+K+SKSLGN + P EV  ++G + +R +  
Sbjct: 619 LLTHGFTVDGQGKKMSKSLGNTVSPQEVSGKLGAEIIRLWCA 660



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + K  +     Y N Q HIGHA   I+ D++ +  +L+G D L+  G D HG  I  A
Sbjct: 56  KPKFILHDGPPYANGQLHIGHAVNKILKDMITKARQLEGFDALYVPGWDCHGLPIENA 113


>gi|192359270|ref|YP_001981853.1| valyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685435|gb|ACE83113.1| valyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 954

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 23/145 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +     +T G+ +  +  K +F P D+ V G DI+ F    W A ++      
Sbjct: 471 VLDTWFSSGLWTFSTLGWPEQTEFLK-RFHPTDVLVTGFDIIFF----WVARMIMLTMHL 525

Query: 281 ------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +A +P  K V+ HG +   +G+K+SKS GNV+DP+++++ + ++     LV++ 
Sbjct: 526 VKHEDGTAQIPF-KTVYVHGLVRDSQGQKMSKSKGNVLDPLDIVDGIDLET----LVQKR 580

Query: 334 ACGKDGFYDKDGLKKRVNADLANGI 358
             G     D   ++K+   +   GI
Sbjct: 581 TTGLMNPKDAAKIEKQTRKEFPEGI 605


>gi|167816121|ref|ZP_02447801.1| valyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 955

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 16/121 (13%)

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           K +   +K  DD   ++  W  A     ++ G+  N       F P+ + V G DI+ F 
Sbjct: 454 KGYTGALKRDDD---VLDTWFSAALVPFSSLGW-PNETPEMKHFLPSSVLVTGFDIIFF- 508

Query: 272 AIYWPAFLL------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
              W A ++      +  +P    V+ HG +   +G+K+SKS GN +DPI++++ +G+DA
Sbjct: 509 ---WVARMVMMTTHFTGKVPF-GTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDA 564

Query: 325 L 325
           L
Sbjct: 565 L 565



 Score = 40.8 bits (94), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA+   I D L R+HR+ G + L+  GTD           +AG+ T++ V++ 
Sbjct: 54 HMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTD-----------HAGIATQIVVERQ 98


>gi|332027446|gb|EGI67529.1| Valyl-tRNA synthetase [Acromyrmex echinatior]
          Length = 1154

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 14/115 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--- 279
           DP  ++  W  +     +  G+ D     KA F+P  L   G DIL F    W A +   
Sbjct: 568 DPD-VLDTWFSSALFPFSIFGWPDETPELKA-FYPTTLLETGHDILFF----WVARMVFM 621

Query: 280 ---LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              L   LP  K+V+ H  +    G K+SKSLGNVIDP++VI+ + ++ L+  L+
Sbjct: 622 GQKLLGQLPF-KEVYLHAMVRDAHGRKMSKSLGNVIDPMDVIKGISLEDLQKQLL 675


>gi|300780193|ref|ZP_07090049.1| leucine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300534303|gb|EFK55362.1| leucine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 948

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 5   EKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KL +     YP+ A  H+GH    I  DV AR++R+ G +VL T G D  G    + A 
Sbjct: 51  DKLNVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDSFGLPAEQYAI 110

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
             G   +     N  N     D L + +D
Sbjct: 111 QTGTHPRTTTMANIENMTRQLDALGLGHD 139


>gi|154341971|ref|XP_001566937.1| valyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064262|emb|CAM40461.1| putative valyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 967

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 12/109 (11%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ ++ D  +  F+P  L   G DIL F    W A ++  
Sbjct: 478 DPD-VLDTWFSSGLWPFSTLGWPNDSDDMQL-FFPNSLMETGHDILFF----WVARMVML 531

Query: 283 NL----PLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDAL 325
           +L     LP ++VF H  +  K GEK+SKS GNVIDP+ V+  V +  L
Sbjct: 532 SLHFTDQLPYREVFLHAMVRDKNGEKMSKSKGNVIDPLYVVHGVSLQTL 580



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 11/55 (20%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
          H+GHA    + D L RFHR+ G + L+  GTD           +AG+ T+V V++
Sbjct: 53 HLGHALTGAVQDTLTRFHRMKGDNTLYLPGTD-----------HAGIATQVVVER 96


>gi|119186693|ref|XP_001243953.1| hypothetical protein CIMG_03394 [Coccidioides immitis RS]
          Length = 1079

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 12/248 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  DP
Sbjct: 550 FPGDFIAEGLDQTRGWFYTLTVLGMHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMILK 371
             ++E  G DALR +L+       +    K+   K V A +   + N         ++LK
Sbjct: 610 TLIMERYGSDALRLYLINSPVVRAEPLRFKESGVKEVVAKVLLPLWNSYKFFDGQVVLLK 669

Query: 372 DYDGM----IPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             + +     PT  A   +  D  IL+ C  +L+ + E M    ++  + +++ L+    
Sbjct: 670 KVENLDYVFDPTMEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTT 729

Query: 426 RYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            ++       LK +   +     L    EV+  L   L  F P + + I+ +  +    +
Sbjct: 730 NWYIRFNRKRLKGELGLEDTKHALNTLFEVLYTLVRGLAPFTPFITDTIY-LRLLPHIPK 788

Query: 485 CFQSLDQR 492
             Q +D R
Sbjct: 789 SLQGVDNR 796



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 19/127 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAA 62
           +    PH GH     I D++ R+  + G  V    G D HG  I            ++A 
Sbjct: 43  FATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYEIDKSLGMSGSEAV 102

Query: 63  QNAGVT-----TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISD 115
           +  G+       K  V + +  +R   D L   I +D+  +T    + ++   ++K++ D
Sbjct: 103 EKLGLAEYNAKCKAIVMRFASEWRQTVDRLGRWIDFDNDYKTMNPTYMESLWWVFKQLYD 162

Query: 116 KGDIYKG 122
           KG +Y+G
Sbjct: 163 KGVVYRG 169


>gi|71022153|ref|XP_761307.1| hypothetical protein UM05160.1 [Ustilago maydis 521]
 gi|46097801|gb|EAK83034.1| hypothetical protein UM05160.1 [Ustilago maydis 521]
          Length = 1087

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 13/243 (5%)

Query: 248 PDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           P  +K KF   +PAD    G D  R  F+ +   A  L    P    + S   +   G+K
Sbjct: 555 PFENKDKFERSFPADFISEGLDQTRGWFYTLLILATHLFDTAPWKNLIVSGLVLAADGKK 614

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNL 361
           +SKSL N  DP  +I + G DA+R +L+       +   + ++G+K+ V +     + + 
Sbjct: 615 MSKSLRNYPDPNLLINQYGADAIRLYLINSPVVRAENLRFKEEGVKEVVASTFLPWLNSF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQNQLIHRALA 415
                S+ L + D  +    A   +      D  IL+ C  +++ I E M    ++  + 
Sbjct: 675 RFFLGSVNLFEKDNGVKFVYANNSNMSSNVMDRWILARCQSLIKLISEEMAAYRLYTVVP 734

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++  L+ E+  ++       LK  N  +     L    E +  L   L +F P L   ++
Sbjct: 735 RLGELIDELTNWYIRFNRRRLKGENGIEDTQAALNSLFETLFTLCRTLSSFTPFLTENLY 794

Query: 475 DIL 477
             L
Sbjct: 795 QGL 797


>gi|325928650|ref|ZP_08189829.1| Isoleucyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540978|gb|EGD12541.1| Isoleucyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 926

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +         PD    K  PADL++ G D  R  F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVL-----PDRGLPK--PADLYLEGSDQHRGWFQSSLLSGVAMDKAA 583

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+  +HGF + + G K+SKSLGN I+P ++++ +G D LR ++ 
Sbjct: 584 PY-KQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIA 629



 Score = 40.4 bits (93), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V  K+ 
Sbjct: 43  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVKLD 102

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             Q  +  R+ A + +D+   DF R
Sbjct: 103 AAQFRQKCREYATEQIDLQRRDFKR 127


>gi|299145883|ref|ZP_07038951.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298516374|gb|EFI40255.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 756


>gi|325678971|ref|ZP_08158569.1| isoleucine--tRNA ligase [Ruminococcus albus 8]
 gi|324109475|gb|EGC03693.1| isoleucine--tRNA ligase [Ruminococcus albus 8]
          Length = 1038

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 16/203 (7%)

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
           P       HG IL K G+K+SKS  N  DP++++++ G DA R +L +  A    D  +D
Sbjct: 586 PCFSNCVVHGTILAKDGKKLSKSSRNYTDPMQLMKKFGTDAFRLYLYQTNAMLIGDLQFD 645

Query: 343 KDGLK---KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +G+    +++   L N     +S +     K  + + P P +  + D  +L+       
Sbjct: 646 DNGISDALQQIIFPLWNACNFYISYANIDDFKP-ESLTP-PTSDNQLDRWMLAKLWEASN 703

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWE--LKKTNPDRASTVLYVTVEV 454
            I +NM    +++ +  +I LV  +  +F     ++ WE  L +   +   T+ YV V +
Sbjct: 704 AISKNMDAYFVNKYVENLIELVDGLTNWFIRRSRRRFWEKGLSEDKKNAYETLYYVLVNM 763

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            +    L     P +A K++  L
Sbjct: 764 CK----LFAPAAPIIAEKLYKTL 782


>gi|289670397|ref|ZP_06491472.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +         PD    K  PADL++ G D  R  F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVL-----PDRGLPK--PADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+  +HGF + + G K+SKSLGN I+P ++++ +G D LR ++ 
Sbjct: 601 PY-KQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIA 646



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +      KV V 
Sbjct: 60  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKK--YGKVGVK 117

Query: 75  QNSRNFRD-----MADVLDISYDDFIR 96
            ++  FR       A+ +D+   DF R
Sbjct: 118 LDAAEFRQKCREYAAEQIDLQRRDFKR 144


>gi|89892414|gb|ABD78995.1| HI0962-like protein [Haemophilus influenzae]
          Length = 601

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 187 KVPD----TLDVWFDSGSTYSSVVANRLEFNGQNI-----DMYLEGSDQHR--GWFMSSL 235

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 236 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 295

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 296 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 348

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 349 AVACALDAQHEIKDAYDNYQFHTVVQRLMRFCS 381


>gi|87301066|ref|ZP_01083907.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284034|gb|EAQ75987.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 493

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 125/318 (39%), Gaps = 62/318 (19%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA   I+ DVL R+    G  V F     +   KI + A   G + +V  ++N   F
Sbjct: 38  HLGHARSYIVWDVLRRYLIWRGYRVTFVQNITDIDDKILRRAAEEGSSMEVVSERNITAF 97

Query: 81  RDMADVLDISYDDFI-RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           RD  D L+I   D + R T  R  D  R +  ++   G                AY  D 
Sbjct: 98  RDDMDSLNILPPDRVPRAT--RCLDGIRAMIAELEASG---------------AAYSADG 140

Query: 140 EVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVI 197
           +VY    GQ  Y          +++G   RL++ ++      + HP +F L    +    
Sbjct: 141 DVYFAVMGQPDYGKLSGRSLSDQQDGASGRLNSDEES----RKRHPFDFALWKGAKPGEP 196

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFW 256
           SF                WG   P  P +  ++   A+    L TT              
Sbjct: 197 SFPSP-------------WG---PGRPGW--HIECSAMVRQELGTT-------------- 224

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             D+H+ G D++  H     A   +AN  PL +    +G +   GEK+SKSLGN    I 
Sbjct: 225 -IDIHLGGSDLIFPHHENEIAQSEAANGEPLARYWLHNGMVNVDGEKMSKSLGNFTT-IR 282

Query: 316 VIEEVGVDA--LRYFLVR 331
            +   GV A  LR F+++
Sbjct: 283 ALLASGVSAMTLRLFVLQ 300


>gi|317502694|ref|ZP_07960806.1| valine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315666180|gb|EFV05735.1| valine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 898

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILH 298
           ++NP+  +  ++ P    V G DI+ F    W A ++ A     K      V+  G +  
Sbjct: 490 INNPNNKEIDYYYPTSDLVTGPDIIFF----WVARMIMAGYEYRKTYPFKHVYFTGIVRD 545

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+   ++  N      
Sbjct: 546 KLGRKMSKSLGNSPDPLMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN------ 599

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   +   +V  E++E  +   I  AL  V
Sbjct: 600 FNNKIWNAFRLVKGWKTADIEQPECNALAVEWFDAKLKQVNIELQEQFKQYRISEALMTV 659

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP 441
             L      ++D    W L+   P
Sbjct: 660 YKL------FWDEFSSWYLEMIKP 677


>gi|291460315|ref|ZP_06599705.1| leucine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417070|gb|EFE90789.1| leucine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 806

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 44/228 (19%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-GEKISKSL 307
           P D+++ G +    H +Y   W  FL    +     P  +K+F+ G I  K G K+SKS 
Sbjct: 528 PVDMYIGGVEHAVLHLLYSRFWTKFLYDIGVIGFDEPF-RKLFNQGMITGKNGIKMSKSK 586

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+ P  ++ + G DALR + +       D  +D+ G+         +G+   ++R  +
Sbjct: 587 GNVVSPDALVRDYGCDALRLYELFVGPPELDAEWDERGI---------DGVYRFLNRFYN 637

Query: 368 MILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           ++ +  +G + PT          +L +  +++ +I +  +N     +L  V+S   E + 
Sbjct: 638 LVQESREGELSPT--------REMLRIRHQLVHDIEQRFEN----FSLNTVVSGFMEHNN 685

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                   EL K           +  E +R  ++LL  F P +A + +
Sbjct: 686 SLI-----ELAKREGG-------IDRETLRIFSVLLAPFAPHIAEECW 721



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 11/179 (6%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+    H+GH    +I+D  AR+  + G  V+   G D  G      A
Sbjct: 29  KEKYYCLDMFPYPSGSGLHVGHWRGYVISDAWARYQLIRGKYVIHPMGWDAFGLPAENYA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   +   +N  N +     ++  YD D  + TT+ + +   + ++ K+ + G  Y
Sbjct: 89  IKMGIHPAITTKKNIENIKRQLKQINALYDWDMELSTTDPKFYKWTQWIFVKMFEHGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +  +   +    +    ++EV  G   +      + N  QWM       R++ Y D+LL
Sbjct: 149 EKEFPINWCPSCKTGLANEEVVDGKCERCGTPVTKKNLRQWM------LRITKYADRLL 201


>gi|237713271|ref|ZP_04543752.1| isoleucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406588|ref|ZP_06083137.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647296|ref|ZP_06724891.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808541|ref|ZP_06767289.1| isoleucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446738|gb|EEO52529.1| isoleucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355291|gb|EEZ04382.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292637372|gb|EFF55795.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444274|gb|EFG12993.1| isoleucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 756


>gi|126662643|ref|ZP_01733642.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126626022|gb|EAZ96711.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 1147

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
           +PAD    G D  R  F+ ++    L+   +   K V S+G +L K G+K+SK LGN +D
Sbjct: 648 FPADFIAEGVDQTRGWFYTLHAIGTLVFDKIAY-KNVVSNGLVLDKNGQKMSKRLGNAVD 706

Query: 313 PIEVIEEVGVDALRYFLV 330
           P   + E G DA R++++
Sbjct: 707 PFTTLAEYGPDATRWYMI 724


>gi|178056945|ref|NP_001116686.1| valyl-tRNA synthetase, mitochondrial precursor [Sus scrofa]
 gi|75045193|sp|Q767M3|SYVM_PIG RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|41529161|dbj|BAD08423.1| KIAA1885 protein [Sus scrofa]
 gi|41529164|dbj|BAD08425.1| KIAA1885 protein [Sus scrofa]
          Length = 1062

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 119/321 (37%), Gaps = 80/321 (24%)

Query: 227 IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------ 279
           ++  W  +     +  G+  + PD   A+F+P  L   G D+L    ++W   +      
Sbjct: 583 VLDTWFSSALFPFSALGWPQETPD--LARFYPLSLLETGSDLL----LFWVGRMVMLGTQ 636

Query: 280 LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-------------------- 318
           L+  LP   KV  H  +   +G K+SKSLGNV+DP ++I                     
Sbjct: 637 LTGQLPF-SKVLLHSMVRDRQGRKMSKSLGNVLDPRDIINGVELQVLQEKLRDGNLDPAE 695

Query: 319 -----------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA-NGIGN 360
                            E G DALR+ L      G D       L   V+  L+     N
Sbjct: 696 LAIAAAAQKKDFPHGIPECGTDALRFTLCSHGVLGGD-------LHLSVSEVLSFRHFCN 748

Query: 361 LVSRSVSMILKDY-DGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +  ++  IL    +  IP P       +  D  ILS  +R  QE     +   + R LA
Sbjct: 749 KIWNALRFILNALGEKFIPQPLEELCPTSPMDAWILSCLARTAQEC----ERGFLTRELA 804

Query: 416 QVISLVSE------VDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPK 468
            V   +         D Y +A KP       P     VL+   +V +R LA L+    P 
Sbjct: 805 LVTHALHHFWLHNLCDVYLEAVKPVLSHSPRPPGPPQVLFSCADVGLRLLAPLM----PF 860

Query: 469 LANKIFDILFVADENRCFQSL 489
           LA +++  L +   N    S+
Sbjct: 861 LAEELWQRLPLRPGNTTAPSI 881



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 18/106 (16%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S  I  PN     HIGHA  + I D L R+HR+ G  VL+  G+D           +AG+
Sbjct: 140 SMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWVPGSD-----------HAGI 188

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTT----EKRHHDTCRIL 109
            T+  V++     R +    ++S +DF+R      E++  + C+ L
Sbjct: 189 ATQAVVEKKLWKERGLRR-RELSREDFLREVWKWKEEKGGEICQQL 233


>gi|322379416|ref|ZP_08053786.1| isoleucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148125|gb|EFX42655.1| isoleucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 941

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 26/205 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +             +   +P+DL + G D  R  F +    + +  + 
Sbjct: 555 HILDVWFDSGSTFKAVCE-------ERLGVYPSDLVLEGSDQHRGWFQSSLLLSCIKHSK 607

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGK 337
            P  K V +HGF +  KG K+SKS GNV    EV++  G D LR ++V       ++   
Sbjct: 608 APF-KAVLTHGFTVDAKGHKMSKSKGNVFSLEEVLKTYGSDILRLWVVMNDYQDNLSVSS 666

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             F       K+V   L   + N+        ++D  G+I         D  IL++ S+V
Sbjct: 667 AFFKQTSESYKKVRNTLRFLLANMEGLQTLTPMQDL-GLI---------DRWILALSSKV 716

Query: 398 LQEIRENMQNQLIHRALAQVISLVS 422
             +++ + +N    + L +++S ++
Sbjct: 717 FTQVQGHFKNFDFVKGLQKLLSFMA 741


>gi|293373258|ref|ZP_06619618.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631781|gb|EFF50399.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 756


>gi|260174881|ref|ZP_05761293.1| isoleucyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315923124|ref|ZP_07919364.1| isoleucyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313696999|gb|EFS33834.1| isoleucyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 756


>gi|303317576|ref|XP_003068790.1| Isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240108471|gb|EER26645.1| Isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1079

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 12/248 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  DP
Sbjct: 550 FPGDFIAEGLDQTRGWFYTLTVLGMHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMILK 371
             ++E  G DALR +L+       +    K+   K V A +   + N         ++LK
Sbjct: 610 TLIMERYGSDALRLYLINSPVVRAEPLRFKESGVKEVVAKVLLPLWNSYKFFDGQVVLLK 669

Query: 372 DYDGM----IPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             + +     PT  A   +  D  IL+ C  +L+ + E M    ++  + +++ L+    
Sbjct: 670 KVENLDYVFDPTMEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTT 729

Query: 426 RYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            ++       LK +   +     L    EV+  L   L  F P + + I+ +  +    +
Sbjct: 730 NWYIRFNRKRLKGELGLEDTKHALNTLFEVLYTLVRGLAPFTPFITDTIY-LRLLPHIPK 788

Query: 485 CFQSLDQR 492
             Q +D R
Sbjct: 789 SLQGVDNR 796



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 19/127 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAA 62
           +    PH GH     I D++ R+  + G  V    G D HG  I            ++A 
Sbjct: 43  FATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYEIDKSLGMSGSEAV 102

Query: 63  QNAGVT-----TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISD 115
           +  G+       K  V + +  +R   D L   I +D+  +T    + ++   ++K++ D
Sbjct: 103 EKLGLAEYNAKCKAIVMRFASEWRQTVDRLGRWIDFDNDYKTMNPTYMESLWWVFKQLYD 162

Query: 116 KGDIYKG 122
           KG +Y+G
Sbjct: 163 KGVVYRG 169


>gi|153806381|ref|ZP_01959049.1| hypothetical protein BACCAC_00644 [Bacteroides caccae ATCC 43185]
 gi|149131058|gb|EDM22264.1| hypothetical protein BACCAC_00644 [Bacteroides caccae ATCC 43185]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 756


>gi|59711074|ref|YP_203850.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354555|sp|Q5E7N4|SYI_VIBF1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59479175|gb|AAW84962.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 952

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  +    P  ++V +HGF++   G K+SKS+GNV+ P 
Sbjct: 571 ADLYLEGSDQHRGWFQSSLISSVAMKGKAPY-RQVLTHGFVVDGNGRKMSKSIGNVVAPK 629

Query: 315 EVIEEVGVDALRYFL-----VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +V  ++G D LR ++       E+A   +         +R+       + NL   + +  
Sbjct: 630 DVTNKLGADILRLWVASTDYTNEVAVSDEILKRSADAYRRIRNTARFFLANLSGFNPATD 689

Query: 370 LKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   + M+         AF    E I S     L E+ +    +L+H    ++ S   +V
Sbjct: 690 IVPAEEMVALDRWAVGRAFAAQQEIIKSYDEYNLHEVTQ----RLMHFCSIEMGSFYLDV 745

Query: 425 --DRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKI 473
             DR + A+K    +++      T LY  VE ++R +A ++     ++ N++
Sbjct: 746 IKDRQYTAKKGGHAQRS----CQTALYYIVEALVRWMAPIMSFTADEIWNEM 793



 Score = 37.0 bits (84), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 59  YANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPI 102


>gi|330722377|gb|EGH00228.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 652

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +  ++   P  K V +HGF++   G K+SKS GNV+ P
Sbjct: 274 PADLYLEGSDQHRGWFQSSLKTSMAINGCAPY-KTVLTHGFVVDANGHKMSKSKGNVMSP 332

Query: 314 IEVIEEVGVDALRYFLV 330
            +V  ++G D LR ++ 
Sbjct: 333 QKVANDLGADILRLWVA 349


>gi|167828413|ref|ZP_02459884.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 830

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 527 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 582

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 583 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 626


>gi|149195254|ref|ZP_01872343.1| isoleucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134596|gb|EDM23083.1| isoleucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 911

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ + +          +   A  +PA +++ G D  R  F +    +  +    
Sbjct: 532 ILDVWFDSGSTWFAVL----KSNRYDAGEYPASMYLEGSDQHRGWFQSSLLVSTAIEKKA 587

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K + +HGF +  KGEK+SKS GNV+ P EV  + G + LR ++ 
Sbjct: 588 PY-KSILTHGFTVDEKGEKMSKSKGNVVAPSEVARKFGTEILRLWVA 633



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           Y N   HIGHA   I+ D++ +++   G D+ +  G D HG  I +
Sbjct: 58  YANGHIHIGHALNKILKDIINKYYYFQGFDIRYVPGWDCHGLPIEQ 103


>gi|21242008|ref|NP_641590.1| isoleucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|81804098|sp|Q8PN19|SYI_XANAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21107406|gb|AAM36126.1| isoleucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +         PD    K  PADL++ G D  R  F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVL-----PDRGLPK--PADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+  +HGF + + G K+SKSLGN I+P ++++ +G D LR ++ 
Sbjct: 601 PY-KQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIA 646



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +      KV V 
Sbjct: 60  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKK--YGKVGVK 117

Query: 75  QNSRNFRD-----MADVLDISYDDFIR 96
            ++  FR        + +D+   DF R
Sbjct: 118 LDAAEFRQKCREYATEQIDLQRRDFKR 144


>gi|289662725|ref|ZP_06484306.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +         PD    K  PADL++ G D  R  F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVL-----PDRGLPK--PADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+  +HGF + + G K+SKSLGN I+P ++++ +G D LR ++ 
Sbjct: 601 PY-KQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIA 646



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +      KV V 
Sbjct: 60  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKK--YGKVGVK 117

Query: 75  QNSRNFRD-----MADVLDISYDDFIR 96
            ++  FR       A+ +D+   DF R
Sbjct: 118 LDAAEFRQKCREYAAEQIDLQRRDFKR 144


>gi|289640973|ref|ZP_06473143.1| isoleucyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289509288|gb|EFD30217.1| isoleucyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 1120

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           + V   G +L  +G K+SK LGNV+DP E+ E  G DA+R+ ++   +   D     + L
Sbjct: 647 ETVLCLGLLLDSEGRKMSKHLGNVLDPFELFERHGADAVRWLMLAAGSPWSDRRVGHEAL 706

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES----DESILSVCSRVLQE 400
           +  V   L   +    + S  ++  +  G  P  TP A   +    D   LS     + E
Sbjct: 707 EDIVRKVL---LTYWNTASFFVLYANAAGWAPGRTPTAEPPARPVLDRWALSELHATIIE 763

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E +      RA  ++   + E+  ++  +      + +PD   T LY  ++    L  
Sbjct: 764 VTEALDGFDALRAGRRLTRFIDELSNWYVRRSRRRFWEADPDALET-LYTCLD---GLTR 819

Query: 461 LLQAFVPKLANKIFDIL 477
           LL  F+P L + ++  L
Sbjct: 820 LLAPFIPFLTDTLWSKL 836


>gi|257454653|ref|ZP_05619909.1| valyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447963|gb|EEV22950.1| valyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 981

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 22/131 (16%)

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLL----------SANLPLP-K 288
           TG L+  D S+A   F P  + V G DI+ F    W A ++            N  +P K
Sbjct: 502 TGELNFDDYSQALKTFHPTSVLVTGFDIIFF----WVARMMMMTLYFIKDKDGNPQVPFK 557

Query: 289 KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V+ HG +   +G+K+SKS GNV+DPI++I+ + ++     LV +   G     D   ++
Sbjct: 558 TVYVHGLVRDGQGQKMSKSKGNVLDPIDLIDGIDLET----LVAKRTTGLMNPKDAQKIE 613

Query: 348 KRVNADLANGI 358
           K    + A+GI
Sbjct: 614 KATRKEFADGI 624



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           S A+  PN     H+GH +   I D L R+HR+ G + L+  GTD           +AG+
Sbjct: 48  SIALPPPNVTGSLHMGHGFNNAIMDTLTRYHRMLGENTLWQPGTD-----------HAGI 96

Query: 68  TTKVFVDQ 75
            T++ V++
Sbjct: 97  ATQMVVER 104


>gi|238026854|ref|YP_002911085.1| valyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876048|gb|ACR28381.1| Valyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 864

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 227 IMYVWIDALTNYLTT--TGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLS 281
           IM  W    T+ LT       +  DG   + +P DL   G DI+R   F  I   + L +
Sbjct: 519 IMDTWA---TSSLTPQIAARWEEADGCFDRVFPMDLRPQGHDIIRTWLFSTIV-RSHLEA 574

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF- 340
            +LP    + S   +    +K+SKS GNV+ P+ ++E+ G D +RY+     A G+ G  
Sbjct: 575 NSLPWKGAMLSGWILDPDRKKMSKSKGNVVTPVALLEQYGSDGVRYW----AAMGRPGMD 630

Query: 341 --YDKDGLK--KRVNADLAN 356
             +D+  +K  +R+   L N
Sbjct: 631 TAFDETQMKNGRRLALKLLN 650


>gi|158337034|ref|YP_001518209.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082318|sp|B0C872|SYI_ACAM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|158307275|gb|ABW28892.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 971

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 23/159 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++          D  +   +PA++++ G D  R  F +    +   + + P
Sbjct: 534 MDVWFDSGSSWAAVC------DQREPLKYPAEMYLEGSDQHRGWFQSSILTSVATNGHAP 587

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             K V +HGF+L  +G K+SKS+GNV+DP  VI            G D LR + V  +  
Sbjct: 588 Y-KTVLTHGFVLDEQGRKMSKSIGNVVDPAIVIAGGKNQKQDPPYGADVLRLW-VSSVDY 645

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
             D    K+ LK+   AD+   I N  SR +   L D+D
Sbjct: 646 ASDVPLGKNILKQM--ADVYRKIRN-TSRFLLGNLHDFD 681



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN 64
           Y N   HIGHA   I+ D + +F  L G  V +  G D HG  I  K  QN
Sbjct: 61  YANGDLHIGHALNKILKDTINKFQLLQGRKVRYVPGWDCHGLPIELKVLQN 111


>gi|1061310|gb|AAA81332.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1063

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 121/310 (39%), Gaps = 79/310 (25%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +    L+  G+  N     + F+P  L   G DIL F    W A +      L
Sbjct: 586 VLDTWFSSGLFPLSILGW-PNQSEDLSVFYPGTLLETGHDILFF----WVARMVMLGLKL 640

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEV----------------------- 316
           +  LP  ++V+ H  +    G K+SKSLGNVIDP++V                       
Sbjct: 641 TGRLPF-REVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLNSNLDPSEV 699

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG--- 359
                         I E G DALR+ L   ++ G+D           +N D+   +G   
Sbjct: 700 EKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRD-----------INLDVNRILGYRH 748

Query: 360 --NLVSRSVSMILKDY-DGMIPTPGAFTESDESILS--VCSRVLQEIRENMQNQLIHRAL 414
             N +  +    L+    G +P+P +     ES++   + SR+ + +R + Q    +   
Sbjct: 749 FCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFP 808

Query: 415 AQVIS-----LVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           A   +     L    D Y +  KP    + +   + A   LY  ++V  +   LL  F+P
Sbjct: 809 AVTTAQYSFWLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLR---LLSPFIP 865

Query: 468 KLANKIFDIL 477
            +  ++F  L
Sbjct: 866 FVTEELFQRL 875


>gi|163848307|ref|YP_001636351.1| leucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526220|ref|YP_002570691.1| leucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669596|gb|ABY35962.1| leucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450099|gb|ACM54365.1| leucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 1000

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+     +GH    +  DV+AR++R+ G +VL   G D  G     AA
Sbjct: 42  KPKYYVLDFYPYPSGDGLSVGHCRNYVPTDVVARYYRMRGYNVLHPMGWDAFGLPTENAA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                   V   + S N++   ++L +SYD
Sbjct: 102 IKTKTNPAVLTRRYSANYKRQMNMLGLSYD 131



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 28/193 (14%)

Query: 255 FW-PADLHVIGKDILRFHAIY---WPAFLLS---ANLPLP-KKVFSHGFILHKG------ 300
           +W P D++V G +    H +Y   W   L      N   P  ++ + G IL         
Sbjct: 700 YWLPVDMYVGGAEHAVMHLLYARFWTKVLYDLGVVNFFEPFTRLRNQGLILAPPREVNGE 759

Query: 301 ---EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              EK+SKS GNVI P EV+ E G DALR         G + F     L    + D   G
Sbjct: 760 IVIEKMSKSKGNVITPDEVVAEHGADALR---------GYEAFISDFELSVPWSTDGVPG 810

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +   + R   ++L        T     E    +  V  + +Q +  ++ N   +  +A +
Sbjct: 811 VKRWLDRVWRIVLSPTAERGQTSAVMNE--RQLRRVTHQTIQRVENDILNFKFNTMVAAL 868

Query: 418 ISLVSEVDRYFDA 430
           +   + + R  DA
Sbjct: 869 MEFTNTLYRARDA 881


>gi|294666946|ref|ZP_06732176.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603318|gb|EFF46739.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 926

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +         PD    K  PADL++ G D  R  F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVL-----PDRGLPK--PADLYLEGSDQHRGWFQSSLLSGVAMDKAA 583

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+  +HGF + + G K+SKSLGN I+P ++++ +G D LR ++ 
Sbjct: 584 PY-KQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIA 629



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +      KV V 
Sbjct: 43  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKK--YGKVGVK 100

Query: 75  QNSRNFRD-----MADVLDISYDDFIR 96
            ++  FR        + +D+   DF R
Sbjct: 101 LDAAEFRQKCREYATEQIDLQRRDFKR 127


>gi|219847425|ref|YP_002461858.1| leucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541684|gb|ACL23422.1| leucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 999

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+     +GH    +  DV+AR++R+ G +VL   G D  G     AA
Sbjct: 42  KPKYYVLDFYPYPSGDGLSVGHCRNYVPTDVVARYYRMRGYNVLHPMGWDAFGLPTENAA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
                   V   + S N++   ++L +SYD
Sbjct: 102 IKTKTNPAVLTRRYSANYKRQMNMLGLSYD 131



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 34/224 (15%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           A+FW   L+ +G  +++F   +    L +  L L      +G I+   EK+SKS GNVI 
Sbjct: 721 ARFWTKVLYDLG--VVKFFEPF--TCLRNQGLILAPAREVNGQIII--EKMSKSKGNVIT 774

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-- 370
           P EV+ E G DALR         G + F     L    N D   G+   + R   ++L  
Sbjct: 775 PDEVVAEHGADALR---------GYEAFISDFELSVPWNTDGVPGVKRWLDRVWRIVLYP 825

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
               G   TP     S+  +  +  + +Q +  ++ N   +  +A ++   + + R  DA
Sbjct: 826 TAERGQSTTP----MSERQLRRIAHQTIQRVEHDILNFKFNTMVAALMEFTNALYRARDA 881

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                        A T  +   E I  L +L+    P +A +++
Sbjct: 882 -----------GLAGTPAW--QEAIELLLLLMAPITPHIAEELW 912


>gi|78046846|ref|YP_363021.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84029578|sp|Q3BW42|SYI_XANC5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78035276|emb|CAJ22921.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+   +         PD    K  PADL++ G D  R  F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVL-----PDRGLPK--PADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K+  +HGF + + G K+SKSLGN I+P ++++ +G D LR ++ 
Sbjct: 601 PY-KQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIA 646



 Score = 40.4 bits (93), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V  K+ 
Sbjct: 60  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVKLD 119

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             Q  +  R+ A + +D+   DF R
Sbjct: 120 AAQFRQKCREYATEQIDLQRRDFKR 144


>gi|71891825|ref|YP_277554.1| valine tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|90103529|sp|Q493Z9|SYV_BLOPB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71795931|gb|AAZ40682.1| valine tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 957

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 13/66 (19%)

Query: 16  PN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
           PN   Q H+GHA++  I DVL R+ R+ G + L+ TGTD           +AG+ T++ V
Sbjct: 47  PNITGQLHLGHAFQQTIMDVLIRYQRMQGKNTLWQTGTD-----------HAGIATQMLV 95

Query: 74  DQNSRN 79
           +    N
Sbjct: 96  EHKIYN 101


>gi|320038783|gb|EFW20718.1| isoleucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1079

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 12/248 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  DP
Sbjct: 550 FPGDFIAEGLDQTRGWFYTLTVLGMHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMILK 371
             ++E  G DALR +L+       +    K+   K V A +   + N         ++LK
Sbjct: 610 TLIMERYGSDALRLYLINSPVVRAEPLRFKESGVKEVVAKVLLPLWNSYKFFDGQVVLLK 669

Query: 372 DYDGM----IPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             + +     PT  A   +  D  IL+ C  +L+ + E M    ++  + +++ L+    
Sbjct: 670 KVENLDYVFDPTMEATNTNVMDRWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTT 729

Query: 426 RYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            ++       LK +   +     L    EV+  L   L  F P + + I+ +  +    +
Sbjct: 730 NWYIRFNRKRLKGELGLEDTKHALNTLFEVLYTLVRGLAPFTPFITDTIY-LRLLPHIPK 788

Query: 485 CFQSLDQR 492
             Q +D R
Sbjct: 789 SLQGVDNR 796



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 19/127 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------------AKAA 62
           +    PH GH     I D++ R+  + G  V    G D HG  I            ++A 
Sbjct: 43  FATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYEIDKSLGMSGSEAV 102

Query: 63  QNAGVT-----TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISD 115
           +  G+       K  V + +  +R   D L   I +D+  +T    + ++   ++K++ D
Sbjct: 103 EKLGLAEYNAKCKAIVMRFASEWRQTVDRLGRWIDFDNDYKTMNPTYMESLWWVFKQLYD 162

Query: 116 KGDIYKG 122
           KG +Y+G
Sbjct: 163 KGVVYRG 169


>gi|298385595|ref|ZP_06995153.1| isoleucine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261736|gb|EFI04602.1| isoleucine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 EVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGIEE 756


>gi|296230059|ref|XP_002760545.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 1009

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-----AKAAQNAGVTT 69
           Y N  PH+GHA   I+ D+  RFH + G  + F  G D HG  I     ++    A   +
Sbjct: 117 YANGDPHVGHALNKILKDIANRFHMMTGSKIHFVPGWDCHGLPIEVKVLSELGGEAQNLS 176

Query: 70  KVFVDQNSRNFRDMA 84
            + + + +R+F   A
Sbjct: 177 AIEIREKARSFAKAA 191



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 23/117 (19%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+  ++   +  L  PD        ADL++ GKD L   F +    +     
Sbjct: 594 QDILDIWFDSGISW---SYVLPGPDQR------ADLYLEGKDQLGGWFQSSLLTSVAARK 644

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  K V  HGF L  GEK+SKSLGNV+ P  VI            G D LR+++ 
Sbjct: 645 KAPY-KTVVVHGFTL--GEKMSKSLGNVLSPDVVINGGQDQSKEPPYGADVLRWWVA 698


>gi|291563588|emb|CBL42404.1| leucyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 803

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 11/181 (6%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLKGKYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DF-IRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +    N +N +   + +   YD D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAISTASNIKNIKRQINQIAALYDWDMEVNTTDPSFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+  +   +    +    ++EV  G   +      + N  QWM       +++AY D+LL
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVNGCCERCGTPVTKKNLRQWM------LKITAYADRLL 201

Query: 178 S 178
           +
Sbjct: 202 N 202



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 44/238 (18%)

Query: 254 KFWPADLHVIGKDILRFHAIY---WPAFLLSANL-----PLPKKVFSHGFILHK-GEKIS 304
           K+ P D+++ G +    H +Y   +  FL    +     P  KK+F+ G I  K G K+S
Sbjct: 523 KYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGVIDFDEPF-KKLFNQGMITGKNGIKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G DALR + +       D  +D  G++         G+   ++R
Sbjct: 582 KSKGNVVSPDDLVRDYGCDALRMYELFVGPPELDAEWDDRGIE---------GVARFLNR 632

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             ++++   D  I       E+ E +     ++  ++  +++ +    +L  V+S   E 
Sbjct: 633 FYNLVMDSKDKDI------KETKEMV-----KLRHKLVYDIETRFNQFSLNTVVSGFMEY 681

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++  D  K    K+   D+         E ++   ILL  F P L  +++  L   D
Sbjct: 682 CNKLTDVAK----KEGGIDK---------ETLKTFVILLAPFTPHLGEELWRELGGTD 726


>gi|261253956|ref|ZP_05946529.1| valyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937347|gb|EEX93336.1| valyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 957

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 117/306 (38%), Gaps = 68/306 (22%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
           ++  W  +      T G+ +  +  K  F P+D+ V G DI+ F    W A ++      
Sbjct: 472 VLDTWFSSALWTFGTQGWPEQTEDLKT-FHPSDVLVTGFDIIFF----WVARMIMMTMHF 526

Query: 281 ------SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV----------------- 316
                  A +P  K V+  G I    G+K+SKS GNV+DPI++                 
Sbjct: 527 NKDENGKAQVPF-KTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 317 --------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                               IE  G DALR+ L    + G+D  +D   L+   N    N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQLI 410
            + N  SR V M  +++D  +           F+ +D+ I S      +E   ++ N  +
Sbjct: 644 KLWN-ASRYVLMNTEEHDCGMSLSAEDRANMEFSLADKWIESQFELAAKEFNAHLDNYRL 702

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A   +   +     D Y +  KP   K T   + +T  Y+ + V+ +   L    +P 
Sbjct: 703 DMAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQQAT-RYMLITVLEKTLRLAHPVLPY 761

Query: 469 LANKIF 474
           +   I+
Sbjct: 762 ITESIW 767


>gi|167849864|ref|ZP_02475372.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 880

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 574 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 629

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 630 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 673


>gi|120612103|ref|YP_971781.1| isoleucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120590567|gb|ABM34007.1| Isoleucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 959

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +     Y N Q HIGHA   I+ D++ +  +L+G D L+T G D HG  I  A
Sbjct: 63  KFILHDGPPYANGQIHIGHAVNKILKDMITKARQLEGFDALYTPGWDCHGLPIENA 118



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 22/162 (13%)

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-----IMYVWIDAL 235
           E HP     +E  ++  + V++G  + + SR T +  +   D P Y     I+ VW D+ 
Sbjct: 519 ELHPR---TMEILDQAAAIVEAGGVE-AWSRVTAEEILGAQDAPNYTKSTDILEVWFDSG 574

Query: 236 TNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKK 289
           + +      T   + +  G +A     DL++ G D  R  FH+    A  +    P  + 
Sbjct: 575 STFWHVLRGTHAGMHHDSGPEA-----DLYLEGHDQHRGWFHSSLLLASAIFGRAPY-RG 628

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + +HGF +  +G+K+SKSLGN + P ++  ++G + +R ++ 
Sbjct: 629 LLTHGFTVDGQGKKMSKSLGNTVSPQQISGKLGAEIIRLWVA 670


>gi|323355040|gb|EGA86871.1| Vas1p [Saccharomyces cerevisiae VL3]
          Length = 1011

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 581 VLDTWFSSGLWPFSTLGW---PEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTG 637

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +D L   L++
Sbjct: 638 SVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQ 686


>gi|300175096|emb|CBK20407.2| unnamed protein product [Blastocystis hominis]
          Length = 1186

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 255 FWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D+ V GKD+++ H   ++Y    +      +P+  F +G I    EK+SKS GN +
Sbjct: 622 WYPFDIRVSGKDLIKNHLMMSLYIHQAIWPDGSKMPRSFFCNGHIQLNNEKMSKSTGNFL 681

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDG 339
              + I++ G DA R+      AC   G
Sbjct: 682 TVDDAIQQFGADATRF------ACADAG 703


>gi|253568351|ref|ZP_04845762.1| isoleucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251842424|gb|EES70504.1| isoleucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 1125

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 623 EVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 681

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 682 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGIEE 719


>gi|307203964|gb|EFN82871.1| Valyl-tRNA synthetase [Harpegnathos saltator]
          Length = 1165

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL------L 280
           ++  W  +     ++ G+ D     KA F+P  L   G DIL F    W A +      L
Sbjct: 570 VLDTWFSSALLPFSSFGWPDQTPELKA-FYPGTLLETGHDILFF----WVARMVFMGQKL 624

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
              LP  ++V+ H  +    G K+SKSLGNVIDP++VI+ + ++ L+  L+
Sbjct: 625 LGQLPF-REVYLHAMVRDAHGRKMSKSLGNVIDPMDVIKGISLEDLQKQLL 674


>gi|213404928|ref|XP_002173236.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001283|gb|EEB06943.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 1112

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 255 FWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           F+P D+ V GKD++  H    +Y  A +       PK + ++G +L  GEK+SKS GN +
Sbjct: 690 FYPFDIRVSGKDLVPNHLTFCLYTHAAIFDEKF-WPKGIRANGHLLMNGEKMSKSTGNFM 748

Query: 312 DPIEVIEEVGVDALRYFLV 330
              E  ++ G DA R  L 
Sbjct: 749 TLHEACKKYGSDATRVALA 767


>gi|160884555|ref|ZP_02065558.1| hypothetical protein BACOVA_02540 [Bacteroides ovatus ATCC 8483]
 gi|156110294|gb|EDO12039.1| hypothetical protein BACOVA_02540 [Bacteroides ovatus ATCC 8483]
          Length = 1162

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 660 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 718

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 719 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 756


>gi|152978732|ref|YP_001344361.1| valyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150840455|gb|ABR74426.1| valyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 948

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 13/68 (19%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S AI  PN     H+GHA++  + D L R+HR+ G + L+ TGTD           +AG+
Sbjct: 36 SIAIPPPNVTGSLHMGHAFQQTLMDTLIRYHRMQGDNTLWQTGTD-----------HAGI 84

Query: 68 TTKVFVDQ 75
           T++ V++
Sbjct: 85 ATQMVVER 92



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 21/113 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +     +T G+   P  +K  A F P ++ + G DI+ F    W A ++   +
Sbjct: 472 VLDTWFSSALWTFSTLGW---PQQTKELAMFHPTNVLITGFDIIFF----WVARMIMMTM 524

Query: 285 ----------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                      +P K V+  G I   +G+K+SKS GNVIDP+++I+ + +++L
Sbjct: 525 HFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVIDPLDMIDGIDLESL 577


>gi|327286779|ref|XP_003228107.1| PREDICTED: valyl-tRNA synthetase-like [Anolis carolinensis]
          Length = 1149

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 10/90 (11%)

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------G 300
           NP+     F+P  L   G DIL F    W A ++   L L  K+      LH       G
Sbjct: 795 NPNEDLHVFYPGTLLETGHDILFF----WVARMVMLGLKLTGKLPFREVYLHAVVRDAHG 850

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            K+SKSLGNVIDP++VI  + ++ L   L+
Sbjct: 851 RKMSKSLGNVIDPLDVITGITLEGLHAQLL 880


>gi|260592110|ref|ZP_05857568.1| isoleucine--tRNA ligase [Prevotella veroralis F0319]
 gi|260535988|gb|EEX18605.1| isoleucine--tRNA ligase [Prevotella veroralis F0319]
          Length = 1221

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 112/237 (47%), Gaps = 28/237 (11%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNV 
Sbjct: 728 FFPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHVGNVT 786

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL---KKRVNADLANGIGNLVSRSVSM 368
           DP E++ + G D +R++++       +  +D +G+   +++    L N      + S   
Sbjct: 787 DPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDECRRKFFGTLYN------TYSFFA 840

Query: 369 ILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-S 422
           +  + DG  PT          E D  I+S  + +++ +   +++    RA   + S V +
Sbjct: 841 LYANVDGYEPTNCKAIKADAPEIDRWIISKLNSLIKGVTAELEDFDPTRAGRLIDSFVNN 900

Query: 423 EVDRYF---DAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++  ++   + ++ W  K+ + D+ S    LY  +  +   A LL  F P  A++++
Sbjct: 901 DLSNWYVRLNRKRFWG-KEMSADKQSAYDTLYTCLMTV---ARLLAPFAPFYADQLY 953


>gi|170106105|ref|XP_001884264.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640610|gb|EDR04874.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1039

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 14/127 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLG 308
           F+P  L   G DIL F    W A ++   + L  KV  +  + H       G K+SKSLG
Sbjct: 588 FYPCTLLETGWDILFF----WVARMVLLGIHLTGKVPFNEVLCHAMIRDAHGRKMSKSLG 643

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDPI+VI+ + ++ L   L       K+    K G KK    D   GI    + ++  
Sbjct: 644 NVIDPIDVIQGLPLEDLHQKLYEGNLDEKEIVKAKAGQKK----DFPKGIPQCGTDALRF 699

Query: 369 ILKDYDG 375
            L  Y G
Sbjct: 700 ALCAYSG 706


>gi|331703572|ref|YP_004400259.1| Isoleucine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802127|emb|CBW54281.1| Isoleucine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 915

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + S   P  K++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDMYLEGNDQYRGWFNASMINSTIYSNTSPY-KQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           I    ++G D LR ++
Sbjct: 607 IAFANDLGADILRLWV 622



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA    + D + RF    G    F  G D HG  I  A    GV  K    
Sbjct: 60  YANGDLHIGHALNKTLKDFIIRFKNATGYYAPFIMGWDTHGLPIESAVTKMGVDRK---S 116

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKG 117
            +S  FR++      + +    + F R      +DT  +            L++K+  KG
Sbjct: 117 MSSVAFRELCYKYALEQVSNQANQFNRLGMFTDYDTKYVTLTHDFEMSELRLFEKMYQKG 176

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYK     ++S   E+   D E+
Sbjct: 177 LIYKDLKPIYWSPSSESALADSEI 200


>gi|325577254|ref|ZP_08147738.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160836|gb|EGC72957.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 941

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 29/214 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 527 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHR--GWFMSSL 575

Query: 279 LLS----ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +LS    +  P  K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++    
Sbjct: 576 MLSTATDSKAPY-KQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTD 634

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDE 388
             G+    D+  + KR  AD    I N    +   +L + +G  P      P      D 
Sbjct: 635 YTGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPQRDAVKPEEMISLDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             ++      +EI++   N   H  + +++   S
Sbjct: 688 WAVACALDAQKEIKDAYDNYQFHTVVQRLMRFCS 721


>gi|294856175|gb|ADF45025.1| methionyl-tRNA synthetase [Escherichia sp. E1118]
          Length = 175

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 44/89 (49%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
           ADV  R+ R+ G +V F    D HG  I   AQ  G++ +  + + S+  +      +IS
Sbjct: 1   ADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGISPEQMIGEMSQEHQTDFAGFNIS 60

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           YD++  T  + +     +++ ++ + G I
Sbjct: 61  YDNYHSTHSEENRQLSELIYTRLKENGFI 89


>gi|239993317|ref|ZP_04713841.1| isoleucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 939

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 12/105 (11%)

Query: 230 VWIDA-LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +T+Y       D P         ADL++ G D  R  F +    +  +  + P 
Sbjct: 537 VWFDSGVTHYFVVDRRDDIPAS-------ADLYLEGSDQHRGWFMSSLMSSTAMHGHAPY 589

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            K+V +HGF +   G K+SKS+GNV+ P EV  ++G D LR ++ 
Sbjct: 590 -KEVLTHGFTVDAHGRKMSKSVGNVVAPQEVTNKLGADILRLWVA 633


>gi|298346576|ref|YP_003719263.1| valine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236637|gb|ADI67769.1| valine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 885

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 12/167 (7%)

Query: 253 AKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL---HKGEKISKSL 307
           A  +P DL   G+DI+R    +    + L    LP  +   S G+IL   HK  K+SKS 
Sbjct: 547 AATFPMDLRPQGQDIIRTWLFSTVVRSHLEFDTLPWRQAAIS-GWILDPDHK--KMSKSK 603

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+ P+ ++E+   DA+RY+       G D  +D+  +K  V   LA  + N    ++S
Sbjct: 604 GNVVTPMALLEKHSSDAVRYWAA-SARLGTDAAFDEGEMK--VGRRLAIKLLNASKFALS 660

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           M   D D ++       E D S++++ + V+    +  +     RAL
Sbjct: 661 MG-GDADLVLDPALVTVEVDRSLIAILAEVITSATKAFEEMNHARAL 706



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +RE +Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    + 
Sbjct: 40  KREAVYSIDTPPPTVSGSLHVGHVFSYTHTDVVARYQRMRGKNVFYPMGWDDNGLPTERR 99

Query: 62  AQN 64
            QN
Sbjct: 100 VQN 102


>gi|213407826|ref|XP_002174684.1| cytoplasmic isoleucine-tRNA ligase Irs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212002731|gb|EEB08391.1| cytoplasmic isoleucine-tRNA ligase Irs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 1063

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 12/233 (5%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PAD    G D  R  F+ +      L    P    + S   +   G+K+SK L N  +P
Sbjct: 549 FPADFISEGIDQTRGWFYTLTVLGTHLFNTAPFKNVIVSGLVMAEDGKKMSKRLKNYPEP 608

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLANGIGNL------VSRSV 366
             +IE  G DALR +L+       +   + +DG+K+ V   L     +        S   
Sbjct: 609 GLIIERYGSDALRLYLINSPVVRAEVLKFKEDGVKEVVARVLIPWWNSYKFFEAQASLYK 668

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +  KD+      P +    D  I++ C  +++ +   M    ++  + Q++ L+ E+  
Sbjct: 669 KVTGKDFKFDENAPASANVMDRWIIARCQSLIEFVDHEMSVYRLYTVVPQLLGLIEEMTN 728

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTV--EVIRQLAILLQAFVPKLANKIFDIL 477
           ++       LK  + + A TV  +T   EV+  L   +  F P +   I+  L
Sbjct: 729 WYIRFNRRRLKGEDGE-AETVAALTALFEVLYTLVRTMAPFTPFITENIYQHL 780


>gi|149196342|ref|ZP_01873397.1| isoleucyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140603|gb|EDM29001.1| isoleucyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 1042

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 22/235 (9%)

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHK-GEKISKSLGNVI 311
           +PA+    G D  R    ++   +LSA +   P  K V  +G +L K G K+SKS  N  
Sbjct: 547 YPAEFIAEGLDQTR--GWFYTLTVLSAAIFDKPAFKNVIVNGLVLAKDGRKMSKSERNFT 604

Query: 312 DPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
            P  ++EE G DALR +L+   +  G++  +D  G+K  V   L     +          
Sbjct: 605 APDNLMEEFGADALRLYLITSGLVKGEEQKFDDKGVKDMVRTALLPWFNSF---KFFKTY 661

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALAQVISLVSEVDR 426
            D DG  P    + E D    +     LQ +++N+  ++    ++  +  + + + ++  
Sbjct: 662 ADLDGWDPAK-HYVEGDNITDNWLISNLQTLKKNISTEMDAYQLYNVVPALFTFIEDLTN 720

Query: 427 YF---DAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   +  + W E  + +   A + LY     +++L+I +  F P  +  I+  L
Sbjct: 721 TYIRLNRGRFWAEGLEDDKCSAYSTLYT---ALKELSISMAPFAPFFSEFIYQEL 772


>gi|118602477|ref|YP_903692.1| valyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567416|gb|ABL02221.1| valyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 915

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 61/270 (22%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNV 310
           ++F+P D+ V G DI+ F       F L     +P K ++  G I   +G+K+SK  GNV
Sbjct: 472 SRFYPTDVLVTGFDIIFFWVARMIMFGLKFTGKIPFKDIYITGLIKDGQGQKMSKFNGNV 531

Query: 311 IDPIEVIEEV-------------------------------------GVDALRYFLVREI 333
           +DPI++I+ +                                     G DALR+      
Sbjct: 532 LDPIDLIDGITLRDLLKKRTQGLMQPKMVEKTKKQTKKEFSDGIPAFGTDALRFTFAALA 591

Query: 334 ACGKDGFYDKDGLKKRVNA--DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           + G+D  ++     KRV    +  N + N  SR V M L+     I      + +D+ IL
Sbjct: 592 SFGRDIKFN----LKRVEGYRNFCNKLWN-ASRFVLMKLEGE--TIDINAQLSTADKWIL 644

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE------VDRYFDAQKPWELKKTNPDRAS 445
           S     LQ  + N++  L    L  +   + E       + Y +  KP  L + +  +A 
Sbjct: 645 S----RLQNTKANVEKHLNDYRLDLMSQTLYEFVWHDYCNWYLELSKP--LLQDDTTKAG 698

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T   + ++V+R++  LL   +P +  +IF+
Sbjct: 699 TRATL-IKVLREIVTLLHPIIPFITEEIFE 727



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
          H+GHA++  I D+L R+HR++G   L+  G D  G
Sbjct: 50 HMGHAFQHTIMDILTRYHRVNGDQTLWQPGIDHAG 84


>gi|323449511|gb|EGB05399.1| hypothetical protein AURANDRAFT_54702 [Aureococcus anophagefferens]
          Length = 1316

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 10/77 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHK-GEKISKSLG 308
           F+P  L   G DIL F    W A ++   L L  K     V+ H  +  K G K+SKSLG
Sbjct: 721 FYPTQLLETGLDILFF----WVARMVMMGLQLTDKLPFTDVYLHAMVRDKEGRKMSKSLG 776

Query: 309 NVIDPIEVIEEVGVDAL 325
           NVIDP+EVI+   ++ L
Sbjct: 777 NVIDPLEVIDGCELEQL 793



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D L R+HR+ G   L+  GTD           +AG+ T+  V++     
Sbjct: 240 HLGHALTAAIEDCLTRWHRMRGHATLYVPGTD-----------HAGIATQSVVEKQLAKQ 288

Query: 81  RDMADVLDISYDDFI 95
                  D+  D F+
Sbjct: 289 NPPVSRHDLGRDKFL 303


>gi|300868849|ref|ZP_07113456.1| Leucyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300333200|emb|CBN58648.1| Leucyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 852

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 37/90 (41%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 30  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               +  + +  QN    R     L  S D
Sbjct: 90  IERRIPPEKWTYQNIAQMRYQLQQLGFSID 119



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP+EV+ + G D  R F++ +    KD  +D        +AD+  G   
Sbjct: 609 EKMSKSKYNGVDPLEVMAKYGADTARMFILFKAPPEKDLEWD--------DADV-EGQFR 659

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R V  ++ ++   +P         E + +  S+V +++R     + IH A+ +V   
Sbjct: 660 FLNR-VWRLVTEFGATLPNS---VGKQEEVPTSLSKVEKDLR-----RAIHTAIKEVTED 710

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + E D  F+      +K +N    ST     +  E +R L +LL  F P +A +++ I+
Sbjct: 711 L-EGDYQFNTAVSEMMKLSNAISDSTCKDSPIYAEGMRTLILLLAPFAPHIAEELWQII 768


>gi|283779403|ref|YP_003370158.1| leucyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283437856|gb|ADB16298.1| leucyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 954

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 1/93 (1%)

Query: 1   MKEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   EKLY+     YP+ A  H+GH       D++ R+ R+ G  VL   G D  G    
Sbjct: 28  MPTSEKLYVLDMFPYPSGAGLHVGHPEGYTATDIVCRYARMCGKSVLHPMGFDAFGLPAE 87

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + A       ++  +QN   F      L  SYD
Sbjct: 88  EHAIKTNTPPRINTEQNIAEFTRQLKELGFSYD 120


>gi|171768|gb|AAA34712.1| isoleucyl-tRNA synthetase (EC 6.1.1.5) [Saccharomyces cerevisiae]
          Length = 1073

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PA+    G D  R  F+ +      L  ++P  K V   G +L   G K+SKSL N  DP
Sbjct: 555 PANFISEGLDQTRGWFYTLAVLGTHLFGSVPYKKSVIVSGIVLAADGRKMSKSLKNYPDP 614

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGF-YDKDGLKKRVNADLA---NGIGNL-----VSR 364
             V+ + G DALR +L+       +   + ++G+K+ V+  L    N    L     + +
Sbjct: 615 SIVLNKYGADALRLYLINSPVLKAESLKFKEEGVKEVVSKVLLPWWNSFKFLDGQIALLK 674

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +S I   YD  + +        E IL+    ++Q I E M    ++  + ++++ + E+
Sbjct: 675 KMSNIDFQYDDSVKSDNVMA---EMILASMQSLVQVIHEEMGQYKLYTVVPKLLNFIDEL 731

Query: 425 DRYF 428
             ++
Sbjct: 732 TNWY 735


>gi|324998733|ref|ZP_08119845.1| leucyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 951

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y+     YP+ A  H+GH    I  DVL R+ R+ G +VL   G D  G    +
Sbjct: 55  SEKPKFYLMDMFPYPSGAGLHVGHPLGFIGTDVLGRYLRMTGHNVLHPMGFDAFGLPAEQ 114

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            A   G   +   + N   +R+    L + +D
Sbjct: 115 YAVQTGTHPRTTTEANIARYREQLRRLGLGHD 146


>gi|319405141|emb|CBI78747.1| Isoleucyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 971

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 13/129 (10%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           WPAD++  G D  R  F +    +    A  P  K V +HGF L   G+K+SKS GN I 
Sbjct: 595 WPADVYFEGSDQHRGWFQSSLLESCGTRACAPY-KAVVTHGFTLDENGKKMSKSFGNTIM 653

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV---NADLANGIGNLVSRSVSMI 369
           P ++I+  G D  R +++         +++   L K++   N D    + N +   +  +
Sbjct: 654 PQDIIKTSGADIFRLWVM------TTDYWEDQRLGKKILQMNVDSYRKLRNAIRWMLGTL 707

Query: 370 LKDYDGMIP 378
           + D    IP
Sbjct: 708 VYDEGEEIP 716



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 27/57 (47%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           K+R    +     Y N   HIGHA   ++ DV+ R  ++ G +  +  G D HG  I
Sbjct: 52  KDRPSYILHDGPPYANGNIHIGHALNKVLKDVIVRSFQMRGFNANYVPGWDCHGLPI 108


>gi|237718582|ref|ZP_04549063.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229452042|gb|EEO57833.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 1108

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNV 310
           + +PAD    G D  R  F  ++  A ++  ++   K V S+G +L K G K+SK L N 
Sbjct: 606 QVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSY-KAVISNGLVLDKNGNKMSKRLNNA 664

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +DP   IE+ G D LR++++   +   +  +D +G+++
Sbjct: 665 VDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEE 702


>gi|224372735|ref|YP_002607107.1| isoleucyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782422|sp|B9L8Z9|SYI_NAUPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|223589145|gb|ACM92881.1| isoleucyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 911

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 14/110 (12%)

Query: 227 IMYVWIDALTNYLTT--TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           I+ VW D+ + +      G  D      A  +PA++++ G D  R    +  + L+S ++
Sbjct: 532 ILDVWFDSGSTWFAVLKNGPYD------AGEYPANMYLEGSDQHR--GWFQSSLLVSTSI 583

Query: 285 P--LP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
               P K + +HGF +  KGEK+SKS GNV+ P EV ++ G + LR ++ 
Sbjct: 584 EERAPYKSILTHGFTVDEKGEKMSKSKGNVVAPQEVSKKFGTEILRLWVA 633



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K  +     Y N   HIGHA   I+ D++ +++   G DV +T G D HG  I +  +
Sbjct: 48  DKFNLHDGPPYANGHIHIGHALNKILKDMIVKYYYFQGFDVRYTPGWDCHGLPIEQQVE 106


>gi|218191678|gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indica Group]
          Length = 1058

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++       D  +      +PAD+++ G D  R  F +    +   +   P
Sbjct: 621 MDVWFDSGSSWAAVLAKRDGLN------FPADIYLEGSDQHRGWFQSSLLTSIATTGKAP 674

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVI 317
               V +HGF+L  KG K+SKSLGNV+DP +VI
Sbjct: 675 Y-SSVITHGFVLDEKGFKMSKSLGNVVDPEKVI 706


>gi|187777226|ref|ZP_02993699.1| hypothetical protein CLOSPO_00773 [Clostridium sporogenes ATCC
           15579]
 gi|187774154|gb|EDU37956.1| hypothetical protein CLOSPO_00773 [Clostridium sporogenes ATCC
           15579]
          Length = 813

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 36/239 (15%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 516 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMS 574

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P + I+E G D  R +L+      + G +  DG+K          IG  + R
Sbjct: 575 KSKGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDGIK---------SIGRFIDR 625

Query: 365 SVSMILKDYDGMIPTP---GAFTESDESILS-VCSRVLQEIRENMQNQLIHRALAQVISL 420
            V  IL++    I       +  + DE  L+ V    ++ I E++     + ++A+++  
Sbjct: 626 -VERILENAREEIKNSKNNKSIMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEF 684

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + + +Y        L       AS +    ++ IR    LL  F P  A + ++++ +
Sbjct: 685 TNALSKY--------LGDDTFKNASFLKESIIDFIR----LLAPFAPHFAEEQWELIGI 731



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 15/180 (8%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             G+  K   D   +N   M   L       ++++ + T    ++   + ++ K+ +KG 
Sbjct: 91  KTGIHPK---DSTFKNIETMESQLRAMGAMFNWENEVITCSPDYYKWTQWVFLKLYEKGL 147

Query: 119 IY-KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y K     W    +    N+  +    DG+      N V     E +F +++ Y D+LL
Sbjct: 148 AYKKKAPVNWCPSCNTVLANEQVL----DGKCERCDSN-VDKKNLEQWFLKITDYADELL 202


>gi|167898466|ref|ZP_02485867.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 863

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D  +  +  T Y D        + PADL++ G D  R  F A            P  
Sbjct: 568 VWFD--SGSIHATVYRDAARADTGGY-PADLYLEGADQHRGWFGASLMTGCAADGRAPF- 623

Query: 288 KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + + +HGF++   G K+SKSLGN + P  + +  G D LR ++ 
Sbjct: 624 RAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRGADILRLWIA 667


>gi|163848242|ref|YP_001636286.1| isoleucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526152|ref|YP_002570623.1| isoleucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669531|gb|ABY35897.1| isoleucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450031|gb|ACM54297.1| isoleucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 1066

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 2/207 (0%)

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V   G IL   G K+SKS GNVI+P EVI   GVDALR++L      G    +  
Sbjct: 589 PAFKNVICLGHILDENGLKMSKSKGNVIEPEEVINAYGVDALRWYLFTAAPPGNARRFSM 648

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             + + +   L               L  +             D   L+  ++++Q++  
Sbjct: 649 ALVSESMRKFLLTLWNTYAFFVTYANLDQWQPGSNRTAELQPIDRWALAALNQLVQQVTT 708

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILL 462
             +   ++ A   +   V E+  ++  +      K+  D      Y T+   +  +A L 
Sbjct: 709 CFEEYDVYTAANAIEHFVDELSNWYVRRNRRRFWKSEADADKEAAYQTLYTCLVTVAKLA 768

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
             F+P ++ +I+  L    +    +S+
Sbjct: 769 APFIPFVSEEIYRNLVAERDPSAAESV 795


>gi|71394074|gb|AAZ32113.1| isoleucyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 945

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 9/107 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           I+ VW D+      + GY    +   +  WP    + G D +R    +W + L+ + + +
Sbjct: 503 ILDVWFDSGVAAWASLGYPKKEEPFNS-LWPVKHVIEGPDQIRG---WWNSSLICSVITM 558

Query: 287 PKKVFSH----GFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +K F H    GF+L   G K+SKS GN +   E IE+   D LRY+
Sbjct: 559 DRKPFDHIMYHGFVLDTHGVKMSKSKGNAVTTNEAIEKYSRDELRYY 605



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 23/144 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE  + Y      Y     H+G A+  I+ D   R+ R++G +V    G D HG  I   
Sbjct: 25  KEGPRYYFLDGPPYATGDIHVGTAWNKILKDYYLRYLRMEGYNVWAQPGYDTHGLPIENK 84

Query: 62  AQ------NAGVTTKV---------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +      N G   K+               ++    R FR++   +D  ++    T + 
Sbjct: 85  VEKKLGLKNKGDIEKLGVENFIKECRNFATQYIGTMGRQFRNLGVWMD--WEHPYLTLDN 142

Query: 101 RHHDTCRILWKKISDKGDIYKGCY 124
            + +     +KK  +KG +YKG Y
Sbjct: 143 EYIENSWFTFKKAFEKGLLYKGKY 166


>gi|11498023|ref|NP_069247.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
 gi|3122884|sp|O29836|SYC_ARCFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2650218|gb|AAB90823.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
          Length = 467

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW--------------PADLHVIGKDILRFHAIYW 275
           +W  A    L      D+P G     W              P D+H  GKD++  H    
Sbjct: 181 LWKSAKEADLKAQAVFDSPWGRGRPGWHIECSVMSAKYLGVPFDIHGGGKDLIFPHHENE 240

Query: 276 PAFLLSANLPLPKKVFSHG-FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            A   +     P K++ H  FI  KGEK+SKSLGN++   +V++    + LRYFL+
Sbjct: 241 RAQSFARFGVEPVKIWVHNDFIRIKGEKMSKSLGNIVRIRDVLQRYEGEVLRYFLL 296


>gi|116200191|ref|XP_001225907.1| hypothetical protein CHGG_08251 [Chaetomium globosum CBS 148.51]
 gi|88179530|gb|EAQ86998.1| hypothetical protein CHGG_08251 [Chaetomium globosum CBS 148.51]
          Length = 1078

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 19/236 (8%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----PLPKKVFSHGFILHKGEKISKSLGN 309
           K +P D    G D  R    ++   +L  +L    P    V +   +   G+K+SK L N
Sbjct: 548 KSFPGDFIAEGLDQTR--GWFYTLLVLGTHLFGVSPFKNCVVNGIVLAENGKKMSKRLQN 605

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA----------NGIG 359
             DP  V+ E G DALR +L+       +    K+   K V A +            G  
Sbjct: 606 YPDPNIVMSEYGSDALRLYLINSPVVRAEPLRFKESGVKEVVAKVLLPLWNSYKFFEGQV 665

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+ + V  +   +D  + T       D+ IL+ C  +L+ + E M    ++  + +++ 
Sbjct: 666 NLL-KKVENVDYRFDSSMETSNTNV-MDKWILASCQSLLKFVNEEMAAYRLYTVVPKLLE 723

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           L+     ++       LK  N  D     L    EV+  L   L  F P L   I+
Sbjct: 724 LIDNTTNWYIRFNRKRLKGENGLDDTLHALNTLFEVLFTLCRGLAPFTPFLTETIY 779



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 19/127 (14%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-----------AKAA- 62
           +    PH GH     I D++ R+  + G  V    G D HG  I            KAA 
Sbjct: 43  FATGLPHYGHLLASTIKDIIPRYWSMKGFHVERRFGWDTHGLPIEHEIDKKLHISGKAAV 102

Query: 63  -----QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISD 115
                +      +  V + S  +R   + L   I +D+  +T +    +T   ++K++ D
Sbjct: 103 MEMGLEKYNAECRAIVMRYSEEWRHTIERLGRWIDFDNDYKTMDPTFMETEWWVFKQLFD 162

Query: 116 KGDIYKG 122
           KG +Y+G
Sbjct: 163 KGQVYQG 169


>gi|325847822|ref|ZP_08170044.1| leucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480840|gb|EGC83893.1| leucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 802

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+ Q  H+GH       D++AR  RL+G +V++  G D  G      
Sbjct: 30  DKKKFYPLVEFPYPSGQGLHVGHPRPYTALDIVARKRRLEGENVIYPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N +NF+     +  S+D    + TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNHIHPSIVTKDNIKNFKGQMKSIGFSFDWSKEVNTTDPNYYKWTQWIFIQLYKHGLA 149

Query: 120 YK 121
           YK
Sbjct: 150 YK 151



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLS-ANLPLP---KKVFSHGFILHKG-EKISKSLG 308
           P D +  G +    H +Y   W  FL     +P     KK  SHG IL +  +K+SKS G
Sbjct: 527 PVDWYNGGMEHTTLHLLYSRFWHKFLYDLGKVPTKEPYKKRTSHGMILGEDHQKMSKSRG 586

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NV++P +++ + G D LR +
Sbjct: 587 NVVNPDDIVRDYGADTLRAY 606


>gi|301320507|gb|ADK69150.1| isoleucine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 915

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + S   P  K++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDMYLEGNDQYRGWFNASMINSTIYSNTSPY-KQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           I    ++G D LR ++
Sbjct: 607 IAFANDLGADILRLWV 622



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA    + D + RF    G    F  G D HG  I  A    GV  K    
Sbjct: 60  YANGDLHIGHALNKTLKDFIIRFKNATGYYAPFIMGWDTHGLPIESAVTKMGVDRK---S 116

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKG 117
            +S  FR++      + +    + F R      +DT  +            L++K+  KG
Sbjct: 117 MSSVAFRELCYKYALEQVSNQANQFNRLGMFTDYDTKYVTLTHDFEMSELRLFEKMYQKG 176

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYK     ++S   E+   D E+
Sbjct: 177 LIYKDLKPIYWSPSSESALADSEI 200


>gi|284166577|ref|YP_003404856.1| valyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016232|gb|ADB62183.1| valyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 928

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 252 KAKFWPADLHVIGKDILRF---HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           K + +P DL   G DI+ F   H I    +  +  +P    + +   +    EK+SKS G
Sbjct: 509 KPELYPFDLRPQGHDIISFWLFHTIV-KCYEHTGEVPFDATMINGHVLDENREKMSKSRG 567

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           NV++P EV+ +  VDA+R++     A G D  Y +  L
Sbjct: 568 NVVEPDEVLADFPVDAVRFWAAS-AAVGDDFPYQEKDL 604


>gi|110799770|ref|YP_695110.1| leucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209961|ref|ZP_02635586.1| leucyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|122959040|sp|Q0TTD0|SYL_CLOP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110674417|gb|ABG83404.1| leucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170711965|gb|EDT24147.1| leucyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 816

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 2   KEREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+ +Q H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD-----ISYDDFIRTTEKRHHDTCRILWKKISD 115
            A   G+  +   D   +N   M + L       ++++ + T    ++   + L+ K+ +
Sbjct: 88  FAIKTGIHPQ---DSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYE 144

Query: 116 KGDIYK 121
           KG  Y+
Sbjct: 145 KGLAYR 150



 Score = 44.3 bits (103), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSH-GFILHK-GEKIS 304
           K  P D +V G +    H +Y   F+  A       N   P    +H G IL   G K+S
Sbjct: 520 KMLPVDKYVGGPEHACMHLLY-ARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           KS GN I P + I+E G D  R +L+   A  + G +  DG+K
Sbjct: 579 KSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIK 621


>gi|60688363|gb|AAH90426.1| Vars protein [Danio rerio]
          Length = 700

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 12/78 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL------LSANLPLPKKVFSHGFILHK-GEKISKSL 307
           F+P  L   G DIL F    W A +      L+  LP  K+V+ H  +    G K+SKSL
Sbjct: 245 FYPGTLLETGHDILFF----WVARMVMMGLKLTGKLPF-KEVYLHAVVRDAHGRKMSKSL 299

Query: 308 GNVIDPIEVIEEVGVDAL 325
           GNVIDP++VI  + ++ L
Sbjct: 300 GNVIDPLDVITGISLEGL 317


>gi|42561115|ref|NP_975566.1| isoleucyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81400563|sp|Q6MT28|SYI_MYCMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|42492612|emb|CAE77208.1| isoleucine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 915

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + S   P  K++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDMYLEGNDQYRGWFNASMINSTIYSNTSPY-KQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           I    ++G D LR ++
Sbjct: 607 IAFANDLGADILRLWV 622



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA    + D + RF    G    F  G D HG  I  A    GV  K    
Sbjct: 60  YANGDLHIGHALNKTLKDFIIRFKNTTGYYAPFIMGWDTHGLPIESAVTKMGVDRK---S 116

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKG 117
            +S  FR++      + +    + F R      +DT  +            L++K+  KG
Sbjct: 117 MSSVAFRELCYKYALEQVSNQANQFNRLGMFTDYDTKYVTLTHDFEMSELRLFEKMYQKG 176

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYK     ++S   E+   D E+
Sbjct: 177 LIYKDLKPIYWSPSSESALADSEI 200


>gi|285019240|ref|YP_003376951.1| leucyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474458|emb|CBA16959.1| putative leucyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 880

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 32/197 (16%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+   H+GH     I DV++R+ R++G +VL   G D  G      A
Sbjct: 35  DKPKFYCLSMLPYPSGALHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLP----A 90

Query: 63  QNAGVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI--------LW 110
           +NA +  K    Q    N  + R     L  + D        R   TCR         ++
Sbjct: 91  ENAAIKNKTAPAQWTYANIAHMRSQLKSLGYAID------WSREFATCRPEYYVHEQRMF 144

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA---DGQYYNAQHNPVQWMEEEGYFF 167
            ++  KG  Y+      +   D+    +++V  G     G     +  P QW      F 
Sbjct: 145 TRLMRKGLAYRRNAVVNWDPVDQTVLANEQVIDGCGWRSGALVEKREIP-QW------FL 197

Query: 168 RLSAYQDKLLSYYESHP 184
           R++ Y  +LL   +  P
Sbjct: 198 RITDYAQELLDGLDQLP 214


>gi|258512336|ref|YP_003185770.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479062|gb|ACV59381.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 1046

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 129/335 (38%), Gaps = 53/335 (15%)

Query: 33  VLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD------- 85
           V+A  H  D         +  HG++  KA Q AG+    FVD++ R  +D++D       
Sbjct: 309 VIASPHVTDESGTGIVHMSPAHGEEDYKACQAAGLIFVNFVDESGRFTKDVSDYEGRFVK 368

Query: 86  --------VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY----SLRDE 133
                   V D++    +    K  H      W+   D   IY   +S W+      +DE
Sbjct: 369 DEDLNVDLVKDLASRGLVYEKHKHEHSYPHC-WR--CDTPLIYYAIHS-WFIRTTEFKDE 424

Query: 134 AYYNDDEVY----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
              N   V        DG+  N   N + W        R   +   L  +       I  
Sbjct: 425 LIANSQSVNWIPPHIRDGRMGNFLENVIDWN-----LSRSRYWGTPLPIWRCDACGEIEC 479

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFD---WGIK--------IPDDPQYIMYVWIDALTNY 238
           I  R E+ +  K+G     L +   D   W  +        +P+    ++ VW D+ +  
Sbjct: 480 IGSRAELQA--KAGRLPKELHKPYIDELVWPCRCGRGTMARVPE----VIDVWFDSGSMP 533

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFI 296
                Y         + +PAD      D  R  F+++   +  ++   P  K V   G +
Sbjct: 534 FAQLHYPFENRELFERLYPADFVCEAIDQTRGWFYSLLAISTAVTGKAPY-KNVLVLGHV 592

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           L + G+K+SKS GNVIDP E  ++ G DA+R++ V
Sbjct: 593 LDEHGKKMSKSKGNVIDPFEAFDKHGADAVRFYFV 627


>gi|261346442|ref|ZP_05974086.1| isoleucine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282565426|gb|EFB70961.1| isoleucine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 936

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 15/116 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + +           G+ A     D+++ G D  R    +  + 
Sbjct: 525 KVPD----TLDVWFDSGSTHFAVVDARPEFHGNSA-----DMYLEGSDQHR--GWFMSSL 573

Query: 279 LLSANLPLP---KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +LS  +      ++V +HGF +  +G K+SKSLGN + P EV+ ++G D LR ++ 
Sbjct: 574 MLSTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQEVMNKLGADILRLWVA 629


>gi|256384639|gb|ACU79208.1| isoleucine tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
          Length = 915

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + S   P  K++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDMYLEGNDQYRGWFNASMINSTIYSNTSPY-KQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           I    ++G D LR ++
Sbjct: 607 IAFANDLGADILRLWV 622



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA    + D + RF    G    F  G D HG  I  A    GV  K    
Sbjct: 60  YANGDLHIGHALNKTLKDFIIRFKNATGYYAPFIMGWDTHGLPIESAVTKMGVDRK---S 116

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKG 117
            +S  FR++      + +    + F R      +DT  +            L++K+  KG
Sbjct: 117 MSSVAFRELCYKYALEQVSNQANQFNRLGMFTDYDTKYVTLTHDFEMSELRLFEKMYQKG 176

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYK     ++S   E+   D E+
Sbjct: 177 LIYKDLKPIYWSPSSESALADSEI 200


>gi|225021936|ref|ZP_03711128.1| hypothetical protein CORMATOL_01968 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945323|gb|EEG26532.1| hypothetical protein CORMATOL_01968 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 1033

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 23/200 (11%)

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYD 342
           P  KKV +HG +L   G K+SKS GN  +  EV +  G DA+R+FL+   I  G +    
Sbjct: 588 PAFKKVVAHGIVLGDDGLKMSKSKGNYPNVNEVFDRDGSDAMRWFLMSSPILRGGNLIVT 647

Query: 343 KDGLKKRVNADL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           + G+++ V   L     A     L S + + I  D   ++         D  IL+    +
Sbjct: 648 EQGIREGVRQALLPMWNAYSFLKLYSATPARIATDSTDIL---------DRYILAKLHNL 698

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +  + + + +  I RA  +V      +  ++     Q+ WE  + +P+  +T+  V   +
Sbjct: 699 VAGVTDALDDTDIARACDEVRWFCDVLTNWYVRRSRQRFWEGDEAHPEAFNTLYTVLEAL 758

Query: 455 IRQLAILLQAFVPKLANKIF 474
            R  A LL    P L+  I+
Sbjct: 759 TRVTAPLL----PMLSEVIW 774


>gi|194364903|ref|YP_002027513.1| isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|254782438|sp|B4SP18|SYI_STRM5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|194347707|gb|ACF50830.1| isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P  K+  +HGF + + G K+SKSLGN I+P
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAIDKRAPY-KQCLTHGFTVDEHGRKMSKSLGNGIEP 629

Query: 314 IEVIEEVGVDALRYFLV 330
            +++ ++G D LR ++ 
Sbjct: 630 QDIMNKLGADILRLWIA 646



 Score = 38.9 bits (89), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N + H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V TK+ 
Sbjct: 60  YANGRIHLGHAVNKILKDIIVKSRYLAGFDAPYVPGWDCHGLPIEIAVEKKWGKVGTKLD 119

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             +  +  R+ A + ++I   DF R
Sbjct: 120 AVEFRQKCREFAEEQINIQRVDFKR 144


>gi|322380882|ref|ZP_08054961.1| isoleucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146686|gb|EFX41507.1| isoleucyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 863

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 26/205 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSAN 283
           +I+ VW D+ + +             +   +P+DL + G D  R  F +    + +  + 
Sbjct: 477 HILDVWFDSGSTFKAVCE-------ERLGVYPSDLVLEGSDQHRGWFQSSLLLSCIKHSK 529

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGK 337
            P  K V +HGF +  KG K+SKS GNV    EV++  G D LR ++V       ++   
Sbjct: 530 APF-KAVLTHGFTVDAKGHKMSKSKGNVFSLEEVLKTYGSDILRLWVVMNDYQDNLSVSS 588

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
             F       K+V   L   + N+        ++D  G+I         D  IL++ S+V
Sbjct: 589 AFFKQTSESYKKVRNTLRFLLANMEGLQTLTPMQDL-GLI---------DRWILALSSKV 638

Query: 398 LQEIRENMQNQLIHRALAQVISLVS 422
             +++ + +N    + L +++S ++
Sbjct: 639 FTQVQGHFKNFDFVKGLQKLLSFMA 663


>gi|319938282|ref|ZP_08012679.1| leucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319806575|gb|EFW03233.1| leucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 798

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANL---PLP-KKVFSHGFILH-KGEKISKSLG 308
           P DL+V G +    H +Y   W  +L        P P +K++  G IL   GEK+SKS G
Sbjct: 522 PVDLYVGGPEHAVGHLLYSRMWNRYLYDKGYLSHPEPFQKLYHQGMILGGNGEKMSKSKG 581

Query: 309 NVIDPIEVIEEVGVDALRYF 328
           NVI+P +++   G D LR +
Sbjct: 582 NVINPDDIVNTYGADTLRVY 601



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y      YP+ Q  H+GH       D+++R  R+ G +VL   G D  G    + A
Sbjct: 31  KPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYNVLHPMGFDSFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
              G   + F  +N   F     +L  S+D    + T +  ++   + ++K++ + G
Sbjct: 91  IKTGNHPEGFTLENIATFTKQLKMLGFSFDWEKCVSTCDPDYYKWTQWIFKQLYNDG 147


>gi|256383809|gb|ACU78379.1| isoleucine tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455908|gb|ADH22143.1| isoleucine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 915

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           P D+++ G D  R  F+A    + + S   P  K++ SHG     KG K+SKSLGN +DP
Sbjct: 548 PYDMYLEGNDQYRGWFNASMINSTIYSNTSPY-KQLVSHGMTTDEKGNKMSKSLGNGVDP 606

Query: 314 IEVIEEVGVDALRYFL 329
           I    ++G D LR ++
Sbjct: 607 IAFANDLGADILRLWV 622



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 20/144 (13%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N   HIGHA    + D + RF    G    F  G D HG  I  A    GV  K    
Sbjct: 60  YANGDLHIGHALNKTLKDFIIRFKNATGYYAPFIMGWDTHGLPIESAVTKMGVDRK---S 116

Query: 75  QNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDTCRI------------LWKKISDKG 117
            +S  FR++      + +    + F R      +DT  +            L++K+  KG
Sbjct: 117 MSSVAFRELCYKYALEQVSNQANQFNRLGMFTDYDTKYVTLTHDFEMSELRLFEKMYQKG 176

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEV 141
            IYK     ++S   E+   D E+
Sbjct: 177 LIYKDLKPIYWSPSSESALADSEI 200


>gi|227497475|ref|ZP_03927704.1| valine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833049|gb|EEH65432.1| valine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 1002

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 29/214 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR---FHAIYWPAFLLSAN 283
           IM  W  +  +    +G+L++ D   A+ +P DL   G+DI+R   F ++   A L    
Sbjct: 616 IMDTWATSSLSPQLVSGWLEDED-LFARVYPMDLRPQGQDIIRTWLFSSVV-RADLEFGA 673

Query: 284 LPLPKKVFSHGFIL---HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           LP  K     G+IL   HK  K+SKS GNV+ P+ ++++ G DA+RY+       G D  
Sbjct: 674 LPW-KHAGISGWILDSDHK--KMSKSKGNVVTPMGLLDKYGSDAVRYWAA-SARLGLDPA 729

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +++  +K  V   LA  + N    ++SM            G   ++DE+ L+       +
Sbjct: 730 FEEAQIK--VGRRLAIKVLNASKFALSM------------GVPWDADEATLAAVPAPSLD 775

Query: 401 IRENMQ--NQLIHRALAQVI-SLVSEVDRYFDAQ 431
           + +  +  ++ +  ALA V+ +  +  DRY  A+
Sbjct: 776 VTKVTEPIDRAVLAALAGVVDTATAAFDRYEHAR 809



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ER ++Y I T     +   H+GH +     D +AR+ R+ G+ V +  G D++G    + 
Sbjct: 115 ERHEVYSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMRGMSVFYPMGWDDNGLPTERR 174

Query: 62  AQN 64
            QN
Sbjct: 175 VQN 177


>gi|209694172|ref|YP_002262100.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254782358|sp|B6EMY6|SYI_ALISL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|208008123|emb|CAQ78265.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 952

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +  +    P  ++V +HGF++   G K+SKS+GNV+ P 
Sbjct: 571 ADLYLEGSDQHRGWFQSSLISSVAMKGKAPY-RQVLTHGFVVDGNGRKMSKSVGNVVAPK 629

Query: 315 EVIEEVGVDALRYFL-----VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +V  ++G D LR ++       E+A   +         +R+       + NL   +    
Sbjct: 630 DVTNKLGADILRLWVASTDYTNEVAVSDEILKRSADAYRRIRNTARFFLANLNGFNPETD 689

Query: 370 LKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   + M+         AF   +E I S     L E+ +    +L+H    ++ S   +V
Sbjct: 690 IVPAEEMVALDRWAVGRAFAAQEEIIKSYDEYNLHEVTQ----RLMHFCSIEMGSFYLDV 745

Query: 425 --DRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKI 473
             DR + A+K    +++      T LY  VE ++R +A ++     ++ N++
Sbjct: 746 IKDRQYTAKKSGHAQRS----CQTALYYIVEALVRWMAPIMSFTADEIWNEM 793



 Score = 36.6 bits (83), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I
Sbjct: 59  YANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPI 102


>gi|188992578|ref|YP_001904588.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|254782455|sp|B0RY28|SYI_XANCB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167734338|emb|CAP52548.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P  K+  +HGF + + G K+SKSLGN I+P
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAMDKVAPY-KQCLTHGFTVDEHGRKMSKSLGNGIEP 629

Query: 314 IEVIEEVGVDALRYFLV 330
            E++  +G D LR ++ 
Sbjct: 630 QEIMRTLGADILRLWIA 646



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V  K+ 
Sbjct: 60  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKKFGKVGVKLD 119

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             Q  +  R+ A + +D+   DF R
Sbjct: 120 AAQFRQKCREYATEQIDLQRRDFKR 144


>gi|90580543|ref|ZP_01236348.1| isoleucyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438201|gb|EAS63387.1| isoleucyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 946

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +        +G  A     DL++ G D  R  F +    +  +    P  
Sbjct: 542 VWFDSGVTHFSVVDSRPEFNGHSA-----DLYLEGSDQHRGWFQSSLISSVAMKDKAPY- 595

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++ 
Sbjct: 596 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVA 639


>gi|305664442|ref|YP_003860729.1| putative valyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88708459|gb|EAR00695.1| putative valyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 876

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 34/284 (11%)

Query: 207 LSLSR-KTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLH 261
           L L+R K+ +  +KI D   DP  ++  W  +    +T    +  PD    + ++P    
Sbjct: 434 LELARAKSQNPNLKIEDLKQDPD-VVDTWFSSWLWPMTVFNGILEPDNEDISYYYPTSDL 492

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFILHKGE-KISKSLGNVIDPIE 315
           V G DI+ F    W A ++ +          + V+  G +  K   K+SK LGN  D ++
Sbjct: 493 VTGPDIIFF----WVARMIISGYEYRDEKPFENVYFTGLVRDKQRRKMSKQLGNSPDALK 548

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD- 374
           +IE  G D +R  L+   A G D  +D+D  ++  N   AN I N        +LK ++ 
Sbjct: 549 LIENYGADGVRVGLLLSSAAGNDLMFDEDLCQQGKN--FANKIWNGFR-----LLKGWEV 601

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             +P P A         +  ++ L EI ++     I  AL  +  LV      +D    W
Sbjct: 602 ADLPQPEASKLGISWYKAKFNQTLVEIEDHFSKYRISDALMAIYKLV------WDDYSSW 655

Query: 435 ELKKTNPDRASTVLYVTVEVIRQL----AILLQAFVPKLANKIF 474
            L+   P     +   T + +  L      LL  F+P L  +I+
Sbjct: 656 LLEIIKPAYQQPIDRKTFDEVITLFEGNLKLLHPFMPFLTEEIW 699


>gi|257066686|ref|YP_003152942.1| leucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798566|gb|ACV29221.1| leucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 800

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 27/177 (15%)

Query: 257 PADLHVIGKDILRFHAIY---WPAFLLSANLPLP-----KKVFSHGFILHKG-EKISKSL 307
           P D +  G +    H +Y   W  FL    + +P     KK  SHG IL    +K+SKS 
Sbjct: 526 PVDWYNGGMEHTTLHLLYSRFWHKFLYDIGV-VPTKEPYKKRTSHGMILGSDHQKMSKSR 584

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI+P +++ + G D LR + +          +  +G++         G    + R  +
Sbjct: 585 GNVINPDDIVRDYGADTLRCYEMFMGDFSSMAIWSDEGVR---------GCRKYLERVFN 635

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +     DG         E  + +  V ++ ++++ E+ +N   + A+A++++L++E+
Sbjct: 636 LTDLVVDG--------EEYSKDLEVVINQTIKKVSEDYENLKFNTAIAKLMTLLNEM 684



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 7/177 (3%)

Query: 4   REKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++  G D  G      A
Sbjct: 31  KKKFYPLVEFPYPSGQGLHVGHPRPYTALDVVARKRRLEGENVMYPMGWDAFGLPTENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +      + N  +F++    +  S+  D  + TT+  ++   + ++ ++   G  Y
Sbjct: 91  IKNKIHPAKVTEDNIAHFKEQMKSIGFSFDWDREVNTTDPDYYKWSQWIFIQMYKHGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           K   S  +    +    ++EV    DG+        V  M+ + +  +++ Y D+L+
Sbjct: 151 KNEMSVNWCPSCQVGLANEEV---VDGKCERCGTEVVHKMKNQ-WMLKITEYADRLI 203


>gi|74006189|ref|XP_536121.2| PREDICTED: similar to mitochondrial isoleucine tRNA synthetase
           [Canis familiaris]
          Length = 964

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-----AKAAQNAGVTT 69
           Y N  PH+GHA   I+ D+  R+H + G  V F  G D HG  I     ++    A   +
Sbjct: 69  YANGDPHVGHALNKILKDIANRYHMMRGSKVHFVPGWDCHGLPIEIKVLSELGGKAQNLS 128

Query: 70  KVFVDQNSRNFRDMA 84
            V + + +R+F + A
Sbjct: 129 AVEIRKKARSFAEAA 143



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 22/118 (18%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSA 282
           Q I+ +W D+ T++       D           ADL++ GKD L   F +    +     
Sbjct: 546 QDILDIWFDSGTSWSYVLPGTDQR---------ADLYLEGKDQLGGWFQSSLLTSVATRK 596

Query: 283 NLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLV 330
             P  K V  HGF L  KGEK+SKSLGNVIDP  VI            G D LR+++ 
Sbjct: 597 KAPF-KTVVVHGFTLGEKGEKMSKSLGNVIDPDVVINGGQDQSAEPPYGADVLRWWVA 653


>gi|53803851|ref|YP_114527.1| valyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81823617|sp|Q606C1|SYV_METCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53757612|gb|AAU91903.1| valyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 921

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG--QKIAKAAQNAGVTT-------KV 71
           H+GHA++  + DVL R+HR+ G   L+  GTD  G   ++    Q AGV         + 
Sbjct: 47  HMGHAFQDTVMDVLIRYHRMKGDRTLWQAGTDHAGIATQMVVERQLAGVGQTRHDLGREA 106

Query: 72  FVDQN-----------SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           F+++            +R  R M   LD S + F  T ++      R ++ ++ ++G IY
Sbjct: 107 FIERVWQWKETSGGTITRQLRRMGASLDWSRERF--TLDEGLSRAVREVFVRLYEEGLIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 10/77 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP----LP-KKVFSHGFIL-HKGEKISKSLG 308
           F+P  + V G DI+ F    W A ++   L     +P ++V+ HG +   +G+K+SKS G
Sbjct: 475 FYPTSVLVTGFDIIFF----WVARMIMMGLKFMGDVPFREVYIHGLVRDAEGQKMSKSKG 530

Query: 309 NVIDPIEVIEEVGVDAL 325
           NV+DPI++I+ + ++ L
Sbjct: 531 NVLDPIDLIDGISLEDL 547


>gi|47221543|emb|CAF97808.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1301

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 56/128 (43%), Gaps = 20/128 (15%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK------GEKISKSLG 308
           F+P  L   G DIL F    W A ++   L L  K+      LH       G K+SKSLG
Sbjct: 844 FYPGTLLETGHDILFF----WVARMVMMGLKLTGKLPFEEVYLHAVVRDAHGRKMSKSLG 899

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DGLKKRVNADLANGIGNLVSRS 365
           NVIDP++VI  + ++ L   L        D   D    +  K+   AD  NGI    + +
Sbjct: 900 NVIDPLDVITGIALEGLHAQLT-------DSNLDPLEVEKAKQGQKADYPNGIPECGTDA 952

Query: 366 VSMILKDY 373
           +   L  Y
Sbjct: 953 LRFALCAY 960



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 23/98 (23%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           H+GHA    I D L R+HR+ G   L+  G D           +AG+ T+V V++     
Sbjct: 341 HLGHALTNAIQDTLTRWHRMRGETTLWNPGCD-----------HAGIATQVVVEKKLMRE 389

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           + M+   D+  + FI+            +WK  ++KGD
Sbjct: 390 KGMSR-HDLGREKFIQE-----------VWKWKNEKGD 415


>gi|29349761|ref|NP_813264.1| valyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81442841|sp|Q89ZM4|SYV_BACTN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29341671|gb|AAO79458.1| valyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 879

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++         +P  K V+  G +  K G K+SKSL
Sbjct: 485 YYPTSDLVTGPDIIFF----WVARMIMVGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 539

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           GN  DP+E+I++ G D +R  ++     G D  +D
Sbjct: 540 GNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFD 574


>gi|21230613|ref|NP_636530.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769391|ref|YP_244153.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81304652|sp|Q4US40|SYI_XANC8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81795655|sp|Q8PBG6|SYI_XANCP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21112194|gb|AAM40454.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574723|gb|AAY50133.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P  K+  +HGF + + G K+SKSLGN I+P
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAMDKVAPY-KQCLTHGFTVDEHGRKMSKSLGNGIEP 629

Query: 314 IEVIEEVGVDALRYFLV 330
            E++  +G D LR ++ 
Sbjct: 630 QEIMRTLGADILRLWIA 646



 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V  K+ 
Sbjct: 60  YANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAIEKKFGKVGVKLD 119

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             Q  +  R+ A + +D+   DF R
Sbjct: 120 AAQFRQKCREYATEQIDLQRRDFKR 144


>gi|260948602|ref|XP_002618598.1| hypothetical protein CLUG_02057 [Clavispora lusitaniae ATCC 42720]
 gi|238848470|gb|EEQ37934.1| hypothetical protein CLUG_02057 [Clavispora lusitaniae ATCC 42720]
          Length = 1082

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 15/107 (14%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ++  W  +    ++T G+   P+ +K   +F P  +   G DIL F    W + ++  +L
Sbjct: 607 VLDTWFSSGLWPISTLGW---PNQTKDLERFSPMSMLETGWDILFF----WVSRMILLSL 659

Query: 285 PLP-----KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDAL 325
            L      K+VF H  +   +G K+SKSLGNV+DP++VI  + +++L
Sbjct: 660 KLTGKSPFKEVFCHSLVRDAQGRKMSKSLGNVVDPLDVITGISLESL 706


>gi|254522438|ref|ZP_05134493.1| isoleucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720029|gb|EED38554.1| isoleucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P  K+  +HGF + + G K+SKSLGN I+P
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAIDKRAPY-KQCLTHGFTVDEHGRKMSKSLGNGIEP 629

Query: 314 IEVIEEVGVDALRYFLV 330
            +++ ++G D LR ++ 
Sbjct: 630 QDIMNKLGADILRLWIA 646



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N + H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V TK+ 
Sbjct: 60  YANGRIHLGHAVNKILKDIIVKSRYLAGFDAPYVPGWDCHGLPIEIAVEKKWGKVGTKLD 119

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             +  +  R+ A + ++I   DF R
Sbjct: 120 AVEFRQKCREFAEEQINIQRVDFKR 144


>gi|207345136|gb|EDZ72054.1| YGR094Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 789

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHA--IYWPAFLLSA 282
           ++  W  +     +T G+   P+ +K    F+P  +   G DIL F    +      L+ 
Sbjct: 627 VLDTWFSSGLWPFSTLGW---PEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTG 683

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +D L   L++
Sbjct: 684 SVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQ 732


>gi|93005396|ref|YP_579833.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92393074|gb|ABE74349.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 934

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I+DVL+R++RL G +V+   G D  G     AA     
Sbjct: 92  YMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVMQPMGWDGFGLPAENAAIANQT 151

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +  +N  + R    +L +S D   +F  T    ++   + L+ ++  KG +YK   
Sbjct: 152 PPAKWTFENIDSMRAQLKLLGLSIDWSREFA-TCSPEYYQWEQWLFLQLYKKGLVYKKLA 210

Query: 125 SGWYSLRDEAYYNDDEVYKG 144
           +  +   D     +++V  G
Sbjct: 211 TVNWDPVDNTVLANEQVIDG 230


>gi|330844708|ref|XP_003294258.1| hypothetical protein DICPUDRAFT_159231 [Dictyostelium purpureum]
 gi|325075308|gb|EGC29212.1| hypothetical protein DICPUDRAFT_159231 [Dictyostelium purpureum]
          Length = 1049

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 16/128 (12%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPA--FLLSANL----PLP-KKVFSHGFIL-HKGEKISK 305
           K++P D+   G DIL F    W A   +L + L    P+P   +  H  I   +G K+SK
Sbjct: 562 KYFPLDVMETGSDILFF----WVARMVMLCSTLVPESPIPFNSILLHPMIRDSQGRKMSK 617

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNVIDP+ VI  + +  L+  ++      K+      GL K    +   GI    + S
Sbjct: 618 SLGNVIDPLNVINGITLKELKDNVLSSNLTDKEKSIATKGLDK----EFPQGIPQCGTDS 673

Query: 366 VSMILKDY 373
           + + L  Y
Sbjct: 674 LRLSLSQY 681


>gi|312891714|ref|ZP_07751223.1| valyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295797|gb|EFQ72957.1| valyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 918

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 14/125 (11%)

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFI 296
           G+ D  +     ++P +  V   +IL F    W A ++ A       +P  K V+  G +
Sbjct: 509 GFKDPNNEEINYYYPTNDLVTAPEILFF----WVARMIMAGHEFRGEIPF-KNVYLTGIV 563

Query: 297 LHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
             K G K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+   ++  N   A
Sbjct: 564 RDKLGRKMSKSLGNSPDPLHLIEKYGADGVRVGMLLSSPAGNDLMFDEGHCEQGRN--FA 621

Query: 356 NGIGN 360
           N I N
Sbjct: 622 NKIWN 626


>gi|189083225|sp|Q1QDA4|SYL_PSYCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 919

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I+DVL+R++RL G +V+   G D  G     AA     
Sbjct: 77  YMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVMQPMGWDGFGLPAENAAIANQT 136

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +  +N  + R    +L +S D   +F  T    ++   + L+ ++  KG +YK   
Sbjct: 137 PPAKWTFENIDSMRAQLKLLGLSIDWSREFA-TCSPEYYQWEQWLFLQLYKKGLVYKKLA 195

Query: 125 SGWYSLRDEAYYNDDEVYKG 144
           +  +   D     +++V  G
Sbjct: 196 TVNWDPVDNTVLANEQVIDG 215


>gi|167742103|ref|ZP_02414877.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 372

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 25/245 (10%)

Query: 245 LDNP-DGSKAKFW-PADLHVIGKDILR---FHAIYWPAFLLS---ANLPLP-KKVFSHGF 295
           +D+P +   A  W P DL + G D +R   FH       L     A++  P   + + G 
Sbjct: 105 VDDPFNRDDANAWLPVDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGM 164

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R  A +A
Sbjct: 165 VKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRRQRAFVA 223

Query: 356 N--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 + V+ + + I   +D   P     P A     +  L+   R    I  + +   
Sbjct: 224 RLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALQRRMQDWLATGGR---RIAADFRRHD 280

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L  F P +
Sbjct: 281 YHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDVA-ILAGATRQLVLFLGPFAPHV 334

Query: 470 ANKIF 474
           A +++
Sbjct: 335 AEELW 339


>gi|332140401|ref|YP_004426139.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550423|gb|AEA97141.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 939

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 12/105 (11%)

Query: 230 VWIDA-LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPL 286
           VW D+ +T+Y       D P         ADL++ G D  R  F +    +  +  + P 
Sbjct: 537 VWFDSGVTHYFVVDRRDDIPAS-------ADLYLEGSDQHRGWFMSSLMSSTAMHGHAPY 589

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            K+V +HGF +   G K+SKS+GNV+ P EV  ++G D LR ++ 
Sbjct: 590 -KEVLTHGFTVDAHGRKMSKSVGNVVAPQEVTNKLGADILRLWVA 633


>gi|167914394|ref|ZP_02501485.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 381

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 25/245 (10%)

Query: 245 LDNP-DGSKAKFW-PADLHVIGKDILR---FHAIYWPAFLLS---ANLPLP-KKVFSHGF 295
           +D+P +   A  W P DL + G D +R   FH       L     A++  P   + + G 
Sbjct: 114 VDDPFNRDDANAWLPVDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGM 173

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +     K+SKS GN +    +IE  G DALR  ++   A   D  +  D L +R  A +A
Sbjct: 174 VKQDDRKMSKSAGNAVSLASIIERYGADALRLAIIGAAAPENDVNWSDD-LVRRQRAFVA 232

Query: 356 N--GIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 + V+ + + I   +D   P     P A     +  L+   R    I  + +   
Sbjct: 233 RLWAFVHRVAETEAGIAAAHDAGDPPAAGRPDALQRRMQDWLATGGR---RIAADFRRHD 289

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            H AL  +  L   + + FDA     +++  P RA  V  +     RQL + L  F P +
Sbjct: 290 YHLALKNLAFLFERL-QAFDA----AMRRRAPPRAEDV-AILAGATRQLVLFLGPFAPHV 343

Query: 470 ANKIF 474
           A +++
Sbjct: 344 AEELW 348


>gi|311746193|ref|ZP_07719978.1| leucine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576420|gb|EAZ80698.1| leucine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 924

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 3   EREKLYISTAIAYPN-AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QK 57
           ++ K Y      YP+ A  H+GH    I +D++ARF  L G +VL   G D  G    Q 
Sbjct: 30  DKPKFYTLDMFPYPSGAGLHVGHPLGYIASDIVARFKALKGFNVLHPMGYDSFGLPAEQY 89

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
             +  Q+  +TT+  + + +   +++    D S +  +RT+   ++   + ++ K+
Sbjct: 90  AIQTGQHPAITTEQNITRYTEQLKNIGFAFDWSKE--VRTSNPDYYKWTQWIFMKL 143


>gi|256370599|ref|YP_003108424.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009391|gb|ACU52751.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 1224

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 252 KAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLG 308
           K   +PAD    G D  R  F  ++  + +L  ++   K V S+G +L  KG+K+SKS G
Sbjct: 621 KKIMFPADFICEGVDQTRGWFFTLHAISCMLFNSISF-KNVISNGLVLDEKGKKMSKSRG 679

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           N I+P ++I + G D +R++L+
Sbjct: 680 NTINPFKIINKYGPDTIRWYLI 701


>gi|15604466|ref|NP_220984.1| isoleucyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226182|sp|Q9ZCU4|SYI_RICPR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3861160|emb|CAA15060.1| PROBABLE ISOLEUCYL-TRNA SYNTHETASE (ileS) [Rickettsia prowazekii]
 gi|292572241|gb|ADE30156.1| Isoleucyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 1086

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 48/211 (22%)

Query: 293 HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRY-FLVREIACGKDGFYDKDG----- 345
           HG IL   G+K+SK L N  DP+E+ ++ G DALR   L   +  G++   DKDG     
Sbjct: 614 HGVILDATGQKLSKRLNNYADPLELFDKYGSDALRVTMLSSNVVKGQELLIDKDGKMVFD 673

Query: 346 ---------------LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                               NAD   G  N  S++V                    D  I
Sbjct: 674 TLRLFIKPIWNAYHFFTIYANADSLKGTLNFASQNV-------------------LDVYI 714

Query: 391 LSVCSRVLQEIRENMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRAST 446
           LS     + +I E++ N   Q  + A+++   +++         + W+ +K T+   A  
Sbjct: 715 LSKLKIAVNKIEESLDNFDTQTAYHAVSEFFEVLNNWYIRRSRARFWKNEKDTDKQNAYN 774

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LY  +++   + I + A +P ++  I+  L
Sbjct: 775 TLYSCLKI---MTIAMSALIPMISETIYQGL 802


>gi|325917730|ref|ZP_08179918.1| valyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536059|gb|EGD07867.1| valyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 946

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA++  + D L R+HR+ G D L+  GTD           +AG+ T++ V +N
Sbjct: 50 HMGHAFQQTLMDALVRYHRMRGFDTLWQVGTD-----------HAGIATEMVVSRN 94



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 15/109 (13%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
           ++  W  +     +T G+ D    ++   A++ P+ + V G DI+ F    W A ++ A 
Sbjct: 470 VLETWFSSQLWPFSTLGWPDADAMAERGFARYLPSSVLVTGFDIIFF----WVARMIMAT 525

Query: 284 ------LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
                 +P  + V+  G I   +G+K+SKS GNV+DP+++I+ + ++ L
Sbjct: 526 DSFTGQVPF-RDVYITGLIRDAQGQKMSKSKGNVLDPLDIIDGISIEDL 573


>gi|321459211|gb|EFX70267.1| hypothetical protein DAPPUDRAFT_328232 [Daphnia pulex]
          Length = 989

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 22/160 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-----KKVFSHGFIL-HKGEKISKSLG 308
            +P +L   G DIL F    W A ++  +L L      K+V  HG I   +G K+SKSLG
Sbjct: 525 LFPLNLMETGHDILFF----WVARMVMMSLELTGELPFKEVLLHGIICDSQGRKMSKSLG 580

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACG--KDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           NVIDP++++    +  L   L   +  G      ++K   +KRV     +GI    S ++
Sbjct: 581 NVIDPLDIVYGSSLKCLEDQLESSLKKGHLSSKEFEKAMTEKRVT--FPDGIPQTGSDAL 638

Query: 367 SMILKDYDGMIPTPGAFTESDESILS----VCSRVLQEIR 402
              L  Y+        F   D + L      C+++ Q  R
Sbjct: 639 RFTLCSYN----VKSHFINLDMATLKKNRLFCNKIWQATR 674


>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 927

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++ +     +  +       PAD+++ G D  R  F++    +       
Sbjct: 529 IMDVWFDSGSSHASVLEIREELER------PADIYLEGTDQYRGWFNSSLLTSIAYKGEA 582

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V ++GF +   G+K+SKS GNV+ P EVI++ G D LR ++ 
Sbjct: 583 PY-KGVVTNGFTVDANGKKMSKSQGNVVSPHEVIDQYGADILRLWVA 628



 Score = 40.8 bits (94), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           EK  +     Y N   HIGHA   ++ D+L R+  L G    +  G D HG  I
Sbjct: 48  EKFILHDGPPYANGDIHIGHALNQVLKDILTRYKTLQGYQSPYIPGWDTHGLPI 101


>gi|305680805|ref|ZP_07403612.1| isoleucine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659010|gb|EFM48510.1| isoleucine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 1045

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 23/200 (11%)

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYD 342
           P  KKV +HG +L   G K+SKS GN  +  EV +  G DA+R+FL+   I  G +    
Sbjct: 600 PAFKKVVAHGIVLGDDGLKMSKSKGNYPNVNEVFDRDGSDAMRWFLMSSPILRGGNLIVT 659

Query: 343 KDGLKKRVNADL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           + G+++ V   L     A     L S + + I  D   ++         D  IL+    +
Sbjct: 660 EQGIREGVRQALLPMWNAYSFLKLYSATPARIATDSTDIL---------DRYILAKLHNL 710

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +  + + + +  I RA  +V      +  ++     Q+ WE  + +P+  +T+  V   +
Sbjct: 711 VAGVTDALDDTDIARACDEVRWFCDVLTNWYVRRSRQRFWEGDEAHPEAFNTLYTVLEAL 770

Query: 455 IRQLAILLQAFVPKLANKIF 474
            R  A LL    P L+  I+
Sbjct: 771 TRVTAPLL----PMLSEVIW 786


>gi|190573352|ref|YP_001971197.1| isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|254782439|sp|B2FTJ0|SYI_STRMK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|190011274|emb|CAQ44887.1| putative isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 943

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P  K+  +HGF + + G K+SKSLGN I+P
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAIDKRAPY-KQCLTHGFTVDEHGRKMSKSLGNGIEP 629

Query: 314 IEVIEEVGVDALRYFLV 330
            +++ ++G D LR ++ 
Sbjct: 630 QDIMNKLGADILRLWIA 646



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKVF 72
           Y N + H+GHA   I+ D++ +   L G D  +  G D HG  I  A +     V TK+ 
Sbjct: 60  YANGRIHLGHAVNKILKDIIVKSRYLAGFDAPYVPGWDCHGLPIEIAVEKKWGKVGTKLD 119

Query: 73  VDQNSRNFRDMA-DVLDISYDDFIR 96
             +  +  R+ A + ++I   DF R
Sbjct: 120 AVEFRQKCREFAEEQINIQRVDFKR 144


>gi|89891688|ref|ZP_01203191.1| valyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89516023|gb|EAS18687.1| valyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 877

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 27/243 (11%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHKGE-KISKSLG 308
           ++P    V G DIL F    W A ++ A   L       KV+  G +  K   K+SKSLG
Sbjct: 485 YYPTRDLVTGPDILFF----WVARMIVAGYELRDEKPFDKVYLTGLVRDKQRRKMSKSLG 540

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  D + +IE  G D +R  L+   A G D  +D+D  ++        G  N +  +  +
Sbjct: 541 NSPDALGLIENYGADGVRVGLLLSAAAGNDIMFDEDLCQQ------GKGFVNKMWNAYRL 594

Query: 369 ILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           I   + D  +  P    +      S  S+VL+E+ ++     I   L     L+      
Sbjct: 595 IDGWEVDESLSQPTYALQGLNWYKSRFSQVLEEVEDHYSKYRISDVLMTSYKLI------ 648

Query: 428 FDAQKPWELKKTNPDRA----STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +D    W L+   P+      S  L   + +      L+  F P +  +++  +   D N
Sbjct: 649 YDDFCGWLLEIIKPEYQKPIDSKTLREVIALFEDNLRLMHPFTPFITEELWQAISTRDVN 708

Query: 484 RCF 486
              
Sbjct: 709 EAL 711


>gi|15487790|gb|AAL00939.1|AF401660_1 isoleucyl-tRNA synthetase [Lactobacillus sakei]
          Length = 569

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           IM VW D+ +++       D         +PADL + G D  R  F++    +  +    
Sbjct: 424 IMDVWFDSGSSHQAVLAARDE------LTYPADLILEGSDQYRGWFNSSLITSVAVGEVS 477

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  K V S GF+L   G K+SKSLGN I P ++I+++G D +R ++ 
Sbjct: 478 PY-KAVISQGFVLDGNGRKMSKSLGNTILPEKIIKQMGADIVRLWVA 523


>gi|166153455|ref|YP_001653102.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|1174516|sp|P41368|SYI2_STAAU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|581558|emb|CAA53189.1| isoleucyl tRNA synthetase [Staphylococcus aureus]
 gi|165880096|gb|ABY70707.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
          Length = 1024

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD    G D  R  F+++   + +L       K+  S G IL   G+K+SKS GNVI+
Sbjct: 537 FPADFIAEGVDQTRGWFYSLLVISTILKGKSSY-KRALSLGHILDSNGKKMSKSKGNVIN 595

Query: 313 PIEVIEEVGVDALRYFLVREIA 334
           P E+I + G D+LR+ L+ + A
Sbjct: 596 PTELINKYGADSLRWALISDSA 617


>gi|325921199|ref|ZP_08183064.1| valyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548317|gb|EGD19306.1| valyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 1019

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 11/56 (19%)

Query: 21 HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN 76
          H+GHA++  + D L R+HR+ G D L+  GTD           +AG+ T++ V +N
Sbjct: 50 HMGHAFQQTLMDALVRYHRMRGFDTLWQVGTD-----------HAGIATEMVVSRN 94



 Score = 40.8 bits (94), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 21/112 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLL 280
           ++  W  +     +T G+   PD +        ++ P+ + V G DI+ F    W A ++
Sbjct: 528 VLETWFSSQLWPFSTLGW---PDANAQIERGFERYLPSSVLVTGFDIIFF----WVARMI 580

Query: 281 SAN------LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDAL 325
            A       +P  + V+  G I   +G+K+SKS GNV+DP+++I+ + ++AL
Sbjct: 581 MATDSFTGQVPF-RDVYITGLIRDAQGQKMSKSKGNVLDPLDIIDGISIEAL 631


>gi|304383075|ref|ZP_07365550.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335761|gb|EFM02016.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 1143

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 256 WPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNV++
Sbjct: 646 FPADFINEGVDQTRGWFFTLHAIATMVFDSIAF-KNVISTGLVLDAKGNKMSKRVGNVVN 704

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P ++I++ G DA+R++++       +  +D++G+
Sbjct: 705 PFDMIDKYGADAVRFYMMTNSEPWDNLKFDENGV 738


>gi|301169687|emb|CBW29288.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 924

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K+PD     + VW D+ + Y +        +G        D+++ G D  R    +  + 
Sbjct: 510 KVPD----TLDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHR--GWFMSSL 558

Query: 279 LLSA--NLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +LS   +   P K+V +HGF +  +G K+SKS+GN++ P EV+++ G D LR ++     
Sbjct: 559 MLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDY 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR  AD    I N    +   +L + +G  P      P      D  
Sbjct: 619 TGEMTVSDE--ILKRA-ADSYRRIRN----TARFLLANLNGFDPKRDLVKPEEMISLDRW 671

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++       EI++   N   H  + +++   S
Sbjct: 672 AVACALDAQNEIKDAYDNYQFHTVVQRLMRFCS 704


>gi|299133187|ref|ZP_07026382.1| leucyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298593324|gb|EFI53524.1| leucyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 873

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 6/181 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYRRAKGHNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     + +S D    I T + +++   + ++      G + +
Sbjct: 93  QNKTHPAKWTYANIATMKKQLKSMGLSLDWAREIATCDPKYYKHQQRMFLDFLKAGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    DG+ + +    V+  E   +FF++S Y ++LLS  +
Sbjct: 153 KQSKVNWDPVDQTVLANEQVI---DGRGWRSGAL-VEQRELTQWFFKISDYSEELLSALD 208

Query: 182 S 182
           +
Sbjct: 209 T 209



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 15/177 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP ++I   G D  R+F++ +    +D  + ++G++       AN    
Sbjct: 629 EKMSKSKRNTIDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVQG------ANRFVQ 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R V++           P    +  + + +   R L ++ + ++    + A+A++ + 
Sbjct: 683 RVWRLVNLAAPHLPKASAVPSGNGDV-KPLRASAHRTLADVSQAIERLRFNTAIAKLYTF 741

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  +    D  +     KT+P  A+ V     E +  L  ++   +P LA + ++ L
Sbjct: 742 VGTLAEAIDDAR----LKTDPAFAAAVR----EALDILIRMISPMMPHLAEQCWEAL 790


>gi|217970195|ref|YP_002355429.1| isoleucyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507522|gb|ACK54533.1| isoleucyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 942

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 230 VWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           VW D+ T +   L  +    +P+G +A     D+++ G D  R  FH+       +  + 
Sbjct: 542 VWFDSGTTHKHVLRGSHNDGHPEGPRA-----DMYLEGSDQHRGWFHSSLLTGCAIDGHA 596

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           P  + + +HGF +   G K+SKSLGNV+ P EV  ++G + LR ++ 
Sbjct: 597 PY-RSLLTHGFAVDGAGRKMSKSLGNVVVPQEVTGKLGAEILRLWVA 642



 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I
Sbjct: 48  RPKFVLHDGPPYANGSLHIGHALNKILKDIIVRSKTLAGFDAPYVPGWDCHGLPI 102


>gi|225681907|gb|EEH20191.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1079

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 12/250 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 548 KSFPGDFIAEGLDQTRGWFYTLTVLGVHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYP 607

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSM 368
           DP  +++  G D LR +L+       +    K+   K + A +   + N        V++
Sbjct: 608 DPTLIMDRYGSDPLRLYLINSPVVRAEPLRFKESGVKEIVAKVLLPLWNSYKFFEAQVAL 667

Query: 369 I--LKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           I  ++D D +       T +   D  IL+ C  +L+ + + M    ++  + +++ L+  
Sbjct: 668 IKKIEDVDYVFDPAAEATNTNVMDRWILASCQSLLKFVNQEMAGYRLYTVVPRLLGLIDN 727

Query: 424 VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              ++       LK +   D     L    EV+  L   L  F+P + + I+ +  +   
Sbjct: 728 TTNWYIRFNRKRLKGELGLDDTLHALNTLFEVLYTLVRGLAPFIPFITDNIY-LRLLPHI 786

Query: 483 NRCFQSLDQR 492
            +  Q+ D R
Sbjct: 787 PKSLQAEDSR 796



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           RE         +    PH GH     I D++ R+  + G  V    G D HG  I     
Sbjct: 32  REPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYEID 91

Query: 59  -------AKAAQNAGVT-----TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                  ++A +  G+       +  V + +  +R++ D L   I +D+  +T +    +
Sbjct: 92  KALGMSGSEAVEKLGLAKYNNECRAIVMRFATEWREIIDRLGRWIDFDNDYKTMDTSFME 151

Query: 105 TCRILWKKISDKGDIYKG 122
           +   + K++ DKG IY+G
Sbjct: 152 SLWWIVKQLFDKGMIYRG 169


>gi|218667361|ref|YP_002425048.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218519574|gb|ACK80160.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 937

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +       P  + V +HGF +  +G K+SKS+GNVI P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLLESVASRGRAPY-RAVLTHGFTVDGEGRKMSKSVGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLVRE 332
             +I+  G D LR ++  E
Sbjct: 617 QTIIDRYGADILRLWVASE 635


>gi|308802762|ref|XP_003078694.1| putative leucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116057147|emb|CAL51574.1| putative leucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1086

 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 255 FWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P DL V GKD+++ H   AIY    +       P+   ++G +L   EK+SKS GN  
Sbjct: 675 WYPFDLRVSGKDLIQNHLSFAIYNHTAIWEDKKMWPRAFRTNGHLLLNNEKMSKSTGNFK 734

Query: 312 DPIEVIEEVGVDALRYFLV 330
              + IEE   DA+R+ L 
Sbjct: 735 TLKQAIEEFSADAMRFSLA 753


>gi|325989806|ref|YP_004249505.1| Valyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574891|emb|CBZ40551.1| Valyl-tRNA synthetase [Mycoplasma suis]
          Length = 833

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL-----PLPKKVFSHGFILH-KGEKISKSL 307
           +F+P    V GKDIL      W + ++  +L     P  K +F HG + + +GEK+SKSL
Sbjct: 432 RFFPFSTLVSGKDIL----FPWISRMIYLSLHFNAKPPFKNIFLHGILRNSQGEKMSKSL 487

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           GN I P E+  +   D +R+  +      +D  Y ++  +K +N
Sbjct: 488 GNGILPEELYSKYSSDVIRFAFLSNTHFDRDIKYSENIFQKPIN 531


>gi|294856147|gb|ADF45011.1| methionyl-tRNA synthetase [Escherichia sp. B1147]
 gi|294856169|gb|ADF45022.1| methionyl-tRNA synthetase [Escherichia sp. TW09308]
 gi|294856171|gb|ADF45023.1| methionyl-tRNA synthetase [Escherichia sp. B1225]
 gi|294856173|gb|ADF45024.1| methionyl-tRNA synthetase [Escherichia sp. B646]
 gi|294856177|gb|ADF45026.1| methionyl-tRNA synthetase [Escherichia sp. E1195]
 gi|294856179|gb|ADF45027.1| methionyl-tRNA synthetase [Escherichia sp. E1196]
 gi|294856181|gb|ADF45028.1| methionyl-tRNA synthetase [Escherichia sp. E471]
 gi|294856183|gb|ADF45029.1| methionyl-tRNA synthetase [Escherichia sp. E472]
 gi|294856185|gb|ADF45030.1| methionyl-tRNA synthetase [Escherichia sp. E620]
 gi|294856187|gb|ADF45031.1| methionyl-tRNA synthetase [Escherichia sp. M1108]
 gi|294856189|gb|ADF45032.1| methionyl-tRNA synthetase [Escherichia sp. TA290]
 gi|294856191|gb|ADF45033.1| methionyl-tRNA synthetase [Escherichia sp. TW14263]
 gi|294856193|gb|ADF45034.1| methionyl-tRNA synthetase [Escherichia sp. TW14264]
 gi|294856195|gb|ADF45035.1| methionyl-tRNA synthetase [Escherichia sp. TW14265]
 gi|294856197|gb|ADF45036.1| methionyl-tRNA synthetase [Escherichia sp. TW14266]
 gi|294856199|gb|ADF45037.1| methionyl-tRNA synthetase [Escherichia sp. TW14267]
 gi|294856201|gb|ADF45038.1| methionyl-tRNA synthetase [Escherichia sp. RL325/96]
 gi|294856203|gb|ADF45039.1| methionyl-tRNA synthetase [Escherichia sp. Z205]
          Length = 175

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 44/89 (49%)

Query: 31  ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
           ADV  R+ R+ G +V F    D HG  I   AQ  G++ +  + + S+  +      +IS
Sbjct: 1   ADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGISPEQMIGEMSQEHQTDFAGFNIS 60

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           YD++  T  + +     +++ ++ + G I
Sbjct: 61  YDNYHSTHSEENRQLSELIYTRLKENGFI 89


>gi|254481195|ref|ZP_05094440.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038358|gb|EEB79020.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 922

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 22/206 (10%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDKLLS--YYESHPE 185
           L D+ Y +  E+ K A     N   Q  P QW  E  YF  +   QD  +S   +  H  
Sbjct: 352 LTDQWYVDARELAKPAIAAVENGDIQFVPKQW--ENTYFAWMRDIQDWCISRQLWWGHR- 408

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
             +P    ++   +V    K +    K  D  I +  D   ++  W  +     +T G+ 
Sbjct: 409 --IPAWYDDDGHIYVGESEKAVRAEHKLAD-TISLSQDND-VLDTWFSSALWTFSTLGWP 464

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV-----FSHGFILH-K 299
           +  +  K  F P+ + V G DI+ F    W A ++   L   K+V     + HG +   +
Sbjct: 465 EETEDLKI-FHPSSVLVTGFDIIFF----WVARMIMMTLHFRKEVPFDTVYVHGLVRDAE 519

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDAL 325
           G+K+SKS GNV+DPI++I+ + ++ L
Sbjct: 520 GQKMSKSKGNVLDPIDLIDGIELEPL 545



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 13/69 (18%)

Query: 10 STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
          S  I  PN     H+GH ++  I D L R+HR+ G + L+  GTD           +AG+
Sbjct: 34 SIMIPPPNVTGSLHMGHGFQEAIMDALIRYHRMAGYNTLWQVGTD-----------HAGI 82

Query: 68 TTKVFVDQN 76
           T++ V++ 
Sbjct: 83 ATQMVVERQ 91


>gi|89072554|ref|ZP_01159126.1| isoleucyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051658|gb|EAR57111.1| isoleucyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 946

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLP 287
           VW D+   + +        +G  A     DL++ G D  R  F +    +  +    P  
Sbjct: 542 VWFDSGVTHFSVVDSRPEFNGHSA-----DLYLEGSDQHRGWFQSSLISSVAMKDKAPY- 595

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K+V +HGF++  +G K+SKS+GNV+ P +V  ++G D LR ++      G+    D + L
Sbjct: 596 KQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSD-EIL 654

Query: 347 KKRVNA 352
           K+  +A
Sbjct: 655 KRSADA 660


>gi|46125501|ref|XP_387304.1| hypothetical protein FG07128.1 [Gibberella zeae PH-1]
          Length = 969

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  Y+     YP+   H+GH     IADV+AR+  L G  V+   G D  G     AA
Sbjct: 90  KKDNYYVLPMFPYPSGTLHLGHLRVYSIADVVARYRSLKGDKVMLPMGWDAFGLPAENAA 149

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
               V  + +   N    ++  ++++ S+D
Sbjct: 150 IERNVAPEKWTTSNMAKMKEQLELMNGSWD 179


>gi|317484563|ref|ZP_07943470.1| isoleucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924189|gb|EFV45368.1| isoleucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 941

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 58/291 (19%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW D+ T++          +      +PADL++ G D  R  FH+    A + +  +
Sbjct: 538 ILDVWFDSGTSFAAVL------EKRPELGFPADLYLEGSDQHRGWFHSSLL-ASIGTRGV 590

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  K V +HG+++  +G K+SKS+GN I+  E+I + G + +R + V  +   +D     
Sbjct: 591 PPYKAVLTHGYVVDGEGRKMSKSIGNGIELDEIISKHGAEIIRMW-VSSVDYREDVRISA 649

Query: 344 DGLKKRVNA--DLANG----IGNL--VSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           + + + V+A   + N     +GNL  V+++  + +KD D +          D   L V +
Sbjct: 650 EIVNRLVDAYRRIRNTCRYLLGNLKDVAKADLVDVKDMDPL----------DRYALDVAA 699

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE----------VDRYFDAQKPWELKKTNPDRAS 445
           R  Q +++  ++   H+    + +L S            DR + +      +++    A 
Sbjct: 700 RTHQRVQDAYRDYEFHKVFHSLHNLCSTDLSAFYLDILKDRLYSSAPASRARRS----AQ 755

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           T LY        L +L+Q   P L+       F A+E   F+ + + L PG
Sbjct: 756 TALY------HILLMLVQDMAPVLS-------FTAEE--VFRHIPEALHPG 791


>gi|284006374|emb|CBA71610.1| isoleucyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 922

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 15/117 (12%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +K+PD     + VW D+ + +           G  A     DL++ G D  R    +  +
Sbjct: 510 VKVPD----TLDVWFDSGSTHYAVVDVRPEFKGHSA-----DLYLEGSDQHR--GWFMSS 558

Query: 278 FLLSANLPLP---KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +LS  +      ++V +HGF +  +G K+SKSLGN I P +V+ ++G D LR ++ 
Sbjct: 559 LMLSTAMKGKAPYREVLTHGFTVDGQGRKMSKSLGNTISPQDVMNDLGADILRLWVA 615


>gi|226289077|gb|EEH44589.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 1079

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 12/250 (4%)

Query: 254 KFWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K +P D    G D  R  F+ +      L   LP    V +   +   G+K+SK L N  
Sbjct: 548 KSFPGDFIAEGLDQTRGWFYTLTVLGVHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYP 607

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSM 368
           DP  +++  G D LR +L+       +    K+   K + A +   + N        V++
Sbjct: 608 DPTLIMDRYGSDPLRLYLINSPVVRAEPLRFKESGVKEIVAKVLLPLWNSYKFFEAQVAL 667

Query: 369 I--LKDYDGMIPTPGAFTES---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           I  ++D D +       T +   D  IL+ C  +L+ + + M    ++  + +++ L+  
Sbjct: 668 IKKIEDVDYVFDPAAEATNTNVMDRWILASCQSLLKFVNQEMAGYRLYTVVPRLLGLIDN 727

Query: 424 VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              ++       LK +   D     L    EV+  L   L  F+P + + I+ +  +   
Sbjct: 728 TTNWYIRFNRKRLKGELGLDDTLHALNTLFEVLYTLVRGLAPFIPFITDNIY-LRLLPHI 786

Query: 483 NRCFQSLDQR 492
            +  Q+ D R
Sbjct: 787 PKSLQAEDSR 796



 Score = 37.7 bits (86), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           RE         +    PH GH     I D++ R+  + G  V    G D HG  I     
Sbjct: 32  REPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYEID 91

Query: 59  -------AKAAQNAGVT-----TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                  ++A +  G+       +  V + +  +R++ D L   I +D+  +T +    +
Sbjct: 92  KALGMSGSEAVEKLGLAKYNNECRAIVMRFATEWREIIDRLGRWIDFDNDYKTMDTSFME 151

Query: 105 TCRILWKKISDKGDIYKG 122
           +   + K++ DKG IY+G
Sbjct: 152 SLWWIVKQLFDKGMIYRG 169


>gi|220921032|ref|YP_002496333.1| leucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219945638|gb|ACL56030.1| leucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 868

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 23/177 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + +DG++         G   
Sbjct: 632 EKMSKSKRNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEDGVQ---------GASR 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R V  ++ +      T G  T +D ++     + L  + E+++    +R +A +  L
Sbjct: 683 FVQR-VWRLVNEIAARAETSGDAT-ADLALRKAAHKALAAVGEDIERLRFNRCVAHIYEL 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +      Q    L +     A T+L            LL   +P LA   + +L
Sbjct: 741 ANTLQDALAGQA--TLSRPALLEAGTILVQ----------LLAPMMPHLAESAWAVL 785



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 37/89 (41%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 37  RPTYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGLPAENAAM 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
              +  + +   N    R     + +S D
Sbjct: 97  ERKINPRDWTYANIATMRSQLQAMGLSLD 125


>gi|71901178|ref|ZP_00683282.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|71729060|gb|EAO31187.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
          Length = 943

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           PADL++ G D    H  ++ + LL+     N    K+  +HGF +   G K+SKSLGN I
Sbjct: 571 PADLYLEGADQ---HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGI 627

Query: 312 DPIEVIEEVGVDALRYFLV 330
           +P ++I+ +G D LR ++ 
Sbjct: 628 EPQDIIKTLGADILRLWIA 646



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 21/139 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N Q H+GHA   I+ D++ +   LDG D  +  G D HG  I  A
Sbjct: 47  KGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIA 106

Query: 62  AQ----NAGVTTKVF-------------VDQNSRNFRDMADVLDISYDDFIRTTEKR-HH 103
            +      GVT                 +    R+F+ +  + D  +D   +T + R   
Sbjct: 107 IEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGVIGD--WDAPYKTLDFRFEA 164

Query: 104 DTCRILWKKISDKGDIYKG 122
           D  R L  KI DKG + +G
Sbjct: 165 DEIRAL-AKIVDKGHLIRG 182


>gi|313793221|gb|EFS41288.1| isoleucine--tRNA ligase [Propionibacterium acnes HL110PA1]
          Length = 1135

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 67/309 (21%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIP-----------TPGAFTES---DESILSVCSRVLQEIRENMQNQLI 410
                 + + G++P            P A TE    D  ++S  + +++++ E + N   
Sbjct: 740 PPAVGSRGFGGVVPPAVGTRGFGGVVPPAVTERHVLDRWLVSATNVLVRDVTEALNNFDT 799

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            R    +   V E+  ++  +     ++   D     L+   E +  L  L+   VP + 
Sbjct: 800 QRVGNLIAQFVDELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFIT 855

Query: 471 NKIFDILFV 479
            +++  LFV
Sbjct: 856 ERVWQDLFV 864


>gi|109899483|ref|YP_662738.1| isoleucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123360479|sp|Q15R04|SYI_PSEA6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|109701764|gb|ABG41684.1| Isoleucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 942

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 258 ADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
           ADL++ G D  R  F +    +     + P  K+V +HGF +  KG+K+SKSLGN + P 
Sbjct: 561 ADLYLEGSDQHRGWFMSSLMTSVATKGHAPY-KQVLTHGFTVDGKGKKMSKSLGNTVAPQ 619

Query: 315 EVIEEVGVDALRYFLV 330
           +V  ++G D LR ++ 
Sbjct: 620 QVTNKLGADILRLWVA 635


>gi|71276193|ref|ZP_00652472.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71162954|gb|EAO12677.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
          Length = 943

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           PADL++ G D    H  ++ + LL+     N    K+  +HGF +   G K+SKSLGN I
Sbjct: 571 PADLYLEGADQ---HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGI 627

Query: 312 DPIEVIEEVGVDALRYFLV 330
           +P ++I+ +G D LR ++ 
Sbjct: 628 EPQDIIKTLGADILRLWIA 646



 Score = 43.5 bits (101), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 21/139 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N Q H+GHA   I+ D++ +   LDG D  +  G D HG  I  A
Sbjct: 47  KGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIA 106

Query: 62  AQ----NAGVTTKVF-------------VDQNSRNFRDMADVLDISYDDFIRTTEKR-HH 103
            +      GVT                 +    R+F+ +  + D  +D   +T + R   
Sbjct: 107 IEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGVIGD--WDAPYKTLDFRFEA 164

Query: 104 DTCRILWKKISDKGDIYKG 122
           D  R L  KI DKG + +G
Sbjct: 165 DEIRAL-AKIVDKGHLIRG 182


>gi|313802814|gb|EFS44030.1| isoleucine--tRNA ligase [Propionibacterium acnes HL110PA2]
          Length = 1135

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 67/309 (21%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHAIYWPAFLLSANL 284
            W+D+ +      GY   P GSK KF   +P D      D  R  F+ +     L+    
Sbjct: 564 AWLDSGSMPFAQWGYPHVP-GSKEKFESHYPGDFICEAIDQTRGWFYTMMAVGTLVFDES 622

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFL-------------- 329
              + V   G IL + G K+SK LGN++ PI +++  G DALR+F+              
Sbjct: 623 SY-RNVLCLGHILAEDGRKMSKHLGNILLPIPLMDSHGADALRWFMAADGSPWSARRVGD 681

Query: 330 ------VREIA-------------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 VR++                 +G+    G +   +AD A G G +V  +V  ++
Sbjct: 682 ETIQETVRKVLLTYWNTVSFQVLYARANGWSPAQGTQH--DADPARGFGGVVPPAVDAVV 739

Query: 371 ------KDYDGMIP-----------TPGAFTES---DESILSVCSRVLQEIRENMQNQLI 410
                 + + G++P            P A TE    D  ++S  + +++++ E + N   
Sbjct: 740 PPAVGSRGFGGVVPPAVGSRGFGGVVPPAVTERHVLDRWLVSATNVLVRDVTEALNNFDT 799

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            R    +   V E+  ++  +     ++   D     L+   E +  L  L+   VP + 
Sbjct: 800 QRVGNLIAQFVDELSNWYVRRS----RRRFWDGDEGALWTLHETLETLTKLMAPMVPFIT 855

Query: 471 NKIFDILFV 479
            +++  LFV
Sbjct: 856 ERVWQDLFV 864


>gi|256827073|ref|YP_003151032.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583216|gb|ACU94350.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 948

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 30/257 (11%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANL 284
           I+ VW ++    ++  G L +   +    WPAD+++ G D  R  F +            
Sbjct: 543 ILDVWWES---GVSNVGVLKHRAAADGLRWPADVYLEGSDQHRGWFQSSLLCGIGAFGQA 599

Query: 285 PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-----EIACGKD 338
           P  K V   GF +   GEK+SKS GN IDP +V  + G D LR ++       +++ G+ 
Sbjct: 600 PY-KNVICCGFTVDENGEKMSKSKGNGIDPAQVANKYGADVLRLWVASTDYSVDVSVGES 658

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRV 397
                    +R        +G+L         +  +D ++P       +D+  L   +R+
Sbjct: 659 ILARTSDAYRRFRNTFRFLLGSLADFDPETDAVASFDSLLP-------ADQWALVRLARL 711

Query: 398 LQEIREN---MQNQLIHRALAQ-VISLVSEVDRYFDAQKP--WELKKTNPDR--ASTVLY 449
           L ++       Q   + RAL   V+  +S V  Y DA K   +    T+P R  A TVL 
Sbjct: 712 LDDVNAGYDLYQYHRVFRALYDYVVGDLSAV--YLDALKDRLYAEAPTSPARRSAQTVLM 769

Query: 450 VTVEVIRQLAILLQAFV 466
             ++ + ++   + +F 
Sbjct: 770 AILDTMVRIMSPILSFT 786


>gi|238899076|ref|YP_002924758.1| leucine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511546|sp|C4K7R7|SYL_HAMD5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229466836|gb|ACQ68610.1| leucine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 869

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 6/172 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  KKEKYYCLAMWPYPSGRLHMGHVRNYTITDVIARYQRMLGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N +  +     L  +YD    + + +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKTSPIDWTKANIQYMKKQLQSLGFAYDWSRELTSCKPEYYRWEQWFFTQLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           K      +  +D     +++V    DG+ +    + V+      +F +++AY
Sbjct: 151 KKTSDVNWCPQDFTVLANEQV---IDGRCWRCD-SKVERKSIPQWFIKITAY 198


>gi|146303356|ref|YP_001190672.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|189082974|sp|A4YE96|SYL1_METS5 RecName: Full=Leucyl-tRNA synthetase 1; AltName:
          Full=Leucine--tRNA ligase 1; Short=LeuRS 1
 gi|145701606|gb|ABP94748.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 938

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
          EK +I+ A  Y N+  HIGH    I AD++AR+ R+ G +VLF       G  I   +++
Sbjct: 31 EKYFITVAFPYTNSPLHIGHGRTYITADIVARYQRMIGKNVLFPFAFQFTGTPILSISES 90



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 255 FWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D    G+D+++ H    IY    +   +L LP+++  +GF+   G+K+SKS  N+ 
Sbjct: 571 WYPLDSRHSGRDLVQNHLPFLIYNHLAIFGESL-LPRQIVINGFVRVGGKKMSKSFRNIY 629

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              + +EE GVD +R  L       +D  +D + +K
Sbjct: 630 PLYKAVEEYGVDPVRLALTISSELLEDTDFDVNTVK 665


>gi|82541565|ref|XP_725016.1| valyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479862|gb|EAA16581.1| valyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 935

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 10/77 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLG 308
           F+P  +   G+DIL F    W A ++  ++ L KK+  +   LH      KGEK+SKS G
Sbjct: 524 FFPNTILETGQDILFF----WVARMVMVSIHLMKKLPFNTIYLHAMIRDSKGEKMSKSKG 579

Query: 309 NVIDPIEVIEEVGVDAL 325
           NV+DP+++I  + ++ L
Sbjct: 580 NVVDPLDIINGISLEDL 596


>gi|198282848|ref|YP_002219169.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|198247369|gb|ACH82962.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 937

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +    +       P  + V +HGF +  +G K+SKS+GNVI P
Sbjct: 558 PADLYLEGSDQHRGWFQSSLLESVASRGRAPY-RAVLTHGFTVDGEGRKMSKSVGNVIAP 616

Query: 314 IEVIEEVGVDALRYFLVRE 332
             +I+  G D LR ++  E
Sbjct: 617 QTIIDRYGADILRLWVASE 635


>gi|170730685|ref|YP_001776118.1| isoleucyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|254782457|sp|B0U3Q9|SYI_XYLFM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167965478|gb|ACA12488.1| isoleucyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 943

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA----NLPLPKKVFSHGFIL-HKGEKISKSLGNVI 311
           PADL++ G D    H  ++ + LL+     N    K+  +HGF +   G K+SKSLGN I
Sbjct: 571 PADLYLEGADQ---HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGI 627

Query: 312 DPIEVIEEVGVDALRYFLV 330
           +P ++I+ +G D LR ++ 
Sbjct: 628 EPQDIIKTLGADILRLWIA 646



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 21/139 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N Q H+GHA   I+ D++ +   LDG D  +  G D HG  I  A
Sbjct: 47  KGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIA 106

Query: 62  AQ----NAGVTTKVF-------------VDQNSRNFRDMADVLDISYDDFIRTTEKR-HH 103
            +      GVT                 +    R+F+ +  + D  +D   +T + R   
Sbjct: 107 IEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGVIGD--WDAPYKTLDFRFEA 164

Query: 104 DTCRILWKKISDKGDIYKG 122
           D  R L  KI DKG + +G
Sbjct: 165 DEIRAL-AKIVDKGHLIRG 182


>gi|149190549|ref|ZP_01868819.1| valyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835673|gb|EDL52640.1| valyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 952

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 61/300 (20%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-- 284
           ++  W  +      T G+ +N D  K  F P+D+ V G DI+ F    W A ++   +  
Sbjct: 472 VLDTWFSSALWTFGTQGWPENTDDLKT-FHPSDVLVTGFDIIFF----WVARMIMMTMHF 526

Query: 285 --------PLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEV------------------ 316
                    +P K V+  G I    G+K+SKS GNV+DPI++                  
Sbjct: 527 CKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMM 586

Query: 317 -------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                              IE  G DALR+ L    + G+D  +D   L+   N    N 
Sbjct: 587 QPQLAKKIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEGYRN--FCNK 644

Query: 358 IGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +D D G       ++ +D+ I S      +E   ++ N  +  A   
Sbjct: 645 LWN-ASRYVLMNTEDQDCGFNGGEIEYSLADKWIESQFELAAKEFNGHIDNYRLDMAANT 703

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   +     D Y +  KP  L K N  +        + V+ +   L    +P +   I+
Sbjct: 704 IYEFIWNQFCDWYLELTKP-VLWKGNEAQQRGTRRTLITVLEKTLRLAHPVLPYITETIW 762


>gi|229821049|ref|YP_002882575.1| isoleucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566962|gb|ACQ80813.1| isoleucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 1098

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 96/238 (40%), Gaps = 71/238 (29%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-LPIERRNEVISFVKSGLKDLSLSRKT 213
           NP+ +   E +F R+SA++D+++   E + E   +P   ++        G +D S+SRK 
Sbjct: 441 NPLIYKGVESWFIRVSAFRDRMV---ELNQEITWVPEHLKDGQFGKWLEGARDWSISRKR 497

Query: 214 FDWGIKIP----DDPQY------------------------------------------- 226
           + WG  IP    DDP++                                           
Sbjct: 498 Y-WGTPIPVWTSDDPEHPRIDVYGSIAQLEADFGVPVEDLHRPFIDRLTRPNPDDPTGRS 556

Query: 227 -------IMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHV--IGKDILRFHAIYWP 276
                  +M VW D+ +       Y  +N +  +  F P D  V  IG+    F+ ++  
Sbjct: 557 TMRRIPDVMDVWFDSGSMPFAQVHYPFENTEWFEHHF-PGDFIVEYIGQTRGWFYLLH-- 613

Query: 277 AFLLSANL---PLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +LS  L   P  +   SHG IL   G K SKSL N  DP+ + +  G DA+R+ L+
Sbjct: 614 --VLSTALFDRPAFRTCVSHGIILGDDGRKASKSLRNFPDPMRMFDAYGSDAVRWSLM 669


>gi|171689796|ref|XP_001909838.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944860|emb|CAP70972.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1088

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPL------PKKVFSHGFILHKGEKISKSLG 308
           F+P DL V GKD++  H  +W    L  ++ L      PK V ++G +   G K++KS G
Sbjct: 673 FYPLDLRVSGKDLIPNHLTFW----LYNHIALFPREFWPKSVRANGHLQLNGAKMAKSTG 728

Query: 309 NVIDPIEVIEEVGVDALRYFLV 330
           N +   +V+++ G DA R  L 
Sbjct: 729 NFMTLDDVVKKYGADAARVALA 750


>gi|114765738|ref|ZP_01444836.1| leucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541955|gb|EAU44990.1| leucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 856

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ + +G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKQNGFNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQN 76
             +G   K +   N
Sbjct: 90  MASGGHPKDWTYSN 103



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 30/176 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I + G D  R+F++ +    +D  +   G      A+ AN   + 
Sbjct: 628 KMSKSKNNVVDPVAIIGQYGADTARWFVLSDSPPERDVEWTASG------AEAANKHLSR 681

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+ + I     G +P  G     DE++L    + + ++   +++   + A+A++ +  
Sbjct: 682 VYRACAEIAA---GDVPPTG----EDEALLREMHKAIHDVTMGVESFGFNAAIARLYAFT 734

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + +                RA T      +  + LA L+    P L+ +I+ +L
Sbjct: 735 NALTK---------------SRAGT--EAKTQAAKVLAQLMSPMTPHLSEEIWQLL 773


>gi|71065144|ref|YP_263871.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123761787|sp|Q4FU71|SYL_PSYA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71038129|gb|AAZ18437.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 921

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+ + H+GH     I+DVL+R++RL G +V+   G D  G     AA     
Sbjct: 74  YMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVMQPMGWDGFGLPAENAAIANQT 133

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
               +  +N  + R    +L +S D   +F  T    ++   + L+ ++  KG +YK   
Sbjct: 134 PPAKWTFENIDSMRAQLKLLGLSIDWSREFA-TCSPEYYQWEQWLFLQLYKKGLVYKKLA 192

Query: 125 SGWYSLRDEAYYNDDEVYKG 144
           +  +   D     +++V  G
Sbjct: 193 TVNWDPIDNTVLANEQVIDG 212


>gi|15839009|ref|NP_299697.1| isoleucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|81546990|sp|Q9PAS7|SYI_XYLFA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|9107606|gb|AAF85217.1|AE004051_1 isoleucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 943

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 257 PADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDP 313
           PADL++ G D  R  F +       +    P  K+  +HGF +   G K+SKSLGN I+P
Sbjct: 571 PADLYLEGADQHRGWFQSSLLTGVAMDNAAPY-KQCLTHGFTVDQHGRKMSKSLGNGIEP 629

Query: 314 IEVIEEVGVDALRYFLV 330
            ++I+ +G D LR ++ 
Sbjct: 630 QDIIKTLGADILRLWIA 646



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 21/139 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N Q H+GHA   I+ D++ +   LDG D  +  G D HG  I  A
Sbjct: 47  KGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIA 106

Query: 62  AQ----NAGVTTKVF-------------VDQNSRNFRDMADVLDISYDDFIRTTEKR-HH 103
            +      GVT                 +    R+F+ +  + D  +D   +T + R   
Sbjct: 107 IEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGD--WDAPYKTLDFRFEA 164

Query: 104 DTCRILWKKISDKGDIYKG 122
           D  R L  KI DKG + +G
Sbjct: 165 DEIRAL-AKIVDKGHLIRG 182


>gi|299531569|ref|ZP_07044975.1| isoleucyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720532|gb|EFI61483.1| isoleucyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 951

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)

Query: 227 IMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLS 281
           I+ VW D+ + +   L  T    +P+    K   ADL++ G D  R  FH+    A  + 
Sbjct: 558 ILEVWFDSGSTFWHVLRGT----HPEHHHDKGPEADLYLEGHDQHRGWFHSSLLLASAIF 613

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              P  + + +HGF +  +G+K+SKSLGN + P +V  ++G + +R ++      G  G 
Sbjct: 614 GRAPY-RGLLTHGFTVDGQGKKMSKSLGNTVAPQDVSSKMGAEIIRLWVASTDYSGDLGI 672

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVL 398
            DK  +  RV  D    I N + R +     D+D        G   E D+  L+  +++ 
Sbjct: 673 DDK--ILARV-VDAYRRIRNTL-RFLLANTSDFDASKDAVAYGEMLEIDQFALARSAQLQ 728

Query: 399 QEIRENMQNQLIHRALAQVISLVSE 423
           QEI  + +    H  +A++    SE
Sbjct: 729 QEILAHYKVYEFHPVVAKLQLFCSE 753



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           Y N + HIGHA   I+ D++ +  +L+G D L+  G D HG  I  A + 
Sbjct: 69  YANGKLHIGHAVNKILKDMIVKSRQLEGFDALYAPGWDCHGLPIENAIEK 118


>gi|167765115|ref|ZP_02437228.1| hypothetical protein BACSTE_03501 [Bacteroides stercoris ATCC
           43183]
 gi|167696743|gb|EDS13322.1| hypothetical protein BACSTE_03501 [Bacteroides stercoris ATCC
           43183]
          Length = 894

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 31/233 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN------LPLPKKVFSHGFILHK-GEKISKSL 307
           ++P    V G DI+ F    W A ++ A       +P  K V+  G +  K G K+SKSL
Sbjct: 502 YYPTSDLVTGPDIIFF----WVARMIMAGYEYEGKMPF-KNVYFTGIVRDKLGRKMSKSL 556

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN  DP+++I+  G D +R  ++     G D  +D D L ++   +  N I N       
Sbjct: 557 GNSPDPLDLIDRYGADGVRMGMMLSAPAGNDILFD-DALCEQ-GRNFNNKIWNAFR---- 610

Query: 368 MILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            ++K ++    +P P A   +     S  + V  E+ +      +  AL  V  L     
Sbjct: 611 -LVKGWEVSEEVPVPEAAELAMRWFESKQNAVAAELADLFGKYRLSEALMAVYKL----- 664

Query: 426 RYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++D    W L+   P         V   T+ +   L  LL  F+P +  +++
Sbjct: 665 -FWDEFSSWYLEMIKPAYGQPINKKVYDTTIGLFDNLLHLLHPFMPFITEELW 716


>gi|113477079|ref|YP_723140.1| isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110168127|gb|ABG52667.1| Isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 1152

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 34/270 (12%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--FHAIYWPAFLLSANLP 285
           M VW D+ +++          +G +   +P D+++ G D  R  F +    +   +   P
Sbjct: 542 MDVWFDSGSSWAAVA---QQREGLR---YPVDIYLEGSDQHRGWFQSSLLTSIATNGVAP 595

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFLVREIAC 335
             + V +HGF+L   G K+SKSLGNV+DP+ VIE           G D LR + V  +  
Sbjct: 596 Y-QTVLTHGFVLDENGRKMSKSLGNVVDPVIVIEGGKNQKQEPAYGADILRLW-VSSVDY 653

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESI 390
             D    K+ LK+   AD+   I N  +R +   + D+D   P   A       E D  +
Sbjct: 654 SSDVPLGKNILKQI--ADIYRKIRN-TARFLLGNIHDFD---PAKDAVAYEEMPELDRYM 707

Query: 391 LSVCSRVLQEIRENMQNQLIHR--ALAQVISLVSEVDRYFD-AQKPWELKKTNPDRASTV 447
           L   + V  E+++        R     Q   +V   + Y D A+    +  T+  R  + 
Sbjct: 708 LHRITEVFAEVKDGFDKFQYFRFFQTIQNFCVVDLSNFYLDIAKDRLYISATDAFRRRSC 767

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V V  +  LA  +   +P +A  I+  L
Sbjct: 768 QTVLVVAVENLAKAIAPVLPHMAEDIWQNL 797



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 16/124 (12%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQN--AGVTTKV 71
           Y N   HIGHA   I+ D++ R+  L G  V +  G D HG  I  K  QN  +    K+
Sbjct: 61  YANGNLHIGHALNKILKDIINRYQILQGRKVRYVPGWDCHGLPIELKVIQNIKSAERAKL 120

Query: 72  FVDQNSRNFRDMA-DVLDISYDDFIR-----------TTEKRHHDTCRI-LWKKISDKGD 118
              +  R  RD A + +D   + F R            T    ++  +I ++ K+  KG 
Sbjct: 121 TPIELRRKARDFALETIDKQRESFKRYGVWGDWEHPYMTLSPEYEAAQIGVFGKMVLKGY 180

Query: 119 IYKG 122
           IY+G
Sbjct: 181 IYRG 184


>gi|220935312|ref|YP_002514211.1| valyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996622|gb|ACL73224.1| valyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 920

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 61/314 (19%)

Query: 211 RKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDI 267
           RK +  G  + +  DP  ++  W  +     +T G+ +  P+ S+  ++P ++ V G DI
Sbjct: 429 RKKYKLGAEVALTQDPD-VLDTWFSSALWPFSTLGWPEKTPELSR--YYPTNVLVTGFDI 485

Query: 268 LRFHAIYWPAFLLSANLP----LP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV- 320
           +     +W A ++   L     +P ++V+  G I   +G+K+SKS GNV+DPI++I+ + 
Sbjct: 486 I----FFWVARMIMMGLKFMDDVPFREVYITGLIRDAEGQKMSKSKGNVLDPIDLIDGIT 541

Query: 321 ------------------------------------GVDALRYFLVREIACGKDGFYDKD 344
                                               G DALR+ L    + G+D  +D  
Sbjct: 542 LDALLEKRTQGLMQPQMAKKIDKATRKQFPDGIPPFGTDALRFTLASLASTGRDIKFDLG 601

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            ++   N    N + N  +R V M  +  D G+   P   + +D  I S     + ++R 
Sbjct: 602 RIEGYRN--FCNKLWN-AARYVLMNTEGQDTGLGNEPVELSLADRWIQSRLQGAINQVRG 658

Query: 404 NMQN---QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           N+      L  +AL +  +     D Y +  KP     ++ ++        V V+  L  
Sbjct: 659 NLDQYRFDLAAQALYE-FTWHDYCDWYLELSKPVLTGDSSAEQQRGTRQTLVRVLDALLR 717

Query: 461 LLQAFVPKLANKIF 474
           L+   +P +   I+
Sbjct: 718 LMHPIMPFITEAIW 731



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 22/122 (18%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV--------- 71
           H+GHA++  + D L R+HR+ G D L+  GTD  G       +    T KV         
Sbjct: 47  HMGHAFQHTLMDTLMRYHRMSGDDALWQGGTDHAGIATQMVVERQLATDKVSRHDLGREK 106

Query: 72  -------FVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                  + +Q+    +R  R + + +D   + F  T ++      R ++ ++ D+G IY
Sbjct: 107 FLERVWQWKEQSGGTITRQMRRLGNSIDWERERF--TMDEGLSRAVREVFVRLHDEGLIY 164

Query: 121 KG 122
           +G
Sbjct: 165 RG 166


>gi|70606212|ref|YP_255082.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363440|sp|Q4JBP0|SYL1_SULAC RecName: Full=Leucyl-tRNA synthetase 1; AltName:
          Full=Leucine--tRNA ligase 1; Short=LeuRS 1
 gi|68566860|gb|AAY79789.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 942

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
          + +EK +I+ A  Y N+  HIGH    I AD+ AR+ R+ G +VLF       G  I   
Sbjct: 27 RTKEKKFITVAFPYTNSPLHIGHGRTYITADIYARYLRMKGYNVLFPFAFQFTGTPILSI 86

Query: 62 A 62
          A
Sbjct: 87 A 87



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLG 308
           + ++W P D    G+D+++ H  Y+    +       +PK++  +GFI   G+K+SKS G
Sbjct: 571 EVEYWYPVDSRHSGRDLVQNHIPYYLYHHVGVLGEDKVPKRIVLNGFIRVGGKKMSKSFG 630

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           NV    + I E GVD +R  L    +   D
Sbjct: 631 NVYPLNKAIREYGVDTVRLALTSTSSLSDD 660


>gi|296109261|ref|YP_003616210.1| leucyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434075|gb|ADG13246.1| leucyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 923

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          REK +I+ A  Y N   H GH     I +V+AR+ R+ G +VL+T G    G  I   A+
Sbjct: 27 REKFFITAAFPYLNGVLHAGHLRTFTIPEVVARYQRMRGKNVLWTFGYHVTGTPILGLAE 86

Query: 64 N 64
           
Sbjct: 87 Q 87



 Score = 38.9 bits (89), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 99/228 (43%), Gaps = 31/228 (13%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLP---LPKKVFSHGFILHKGEKISKSLGNVI 311
           ++P D     KD++  H  ++  F   A  P    P+ +  +G++  +G+K+SKS G ++
Sbjct: 567 YYPVDWRCSAKDLIPNHLTFY-IFNHVAIFPEELWPRGIVVNGYVTIEGKKLSKSKGPLL 625

Query: 312 DPIEVIEEVGVDALRYFLVR--EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
             +EV E  G D  R+++    E+    D  + +    KRV   L N    +++      
Sbjct: 626 PVLEVAETFGADVGRFYITTCAELPQDADIKFSELEKTKRVLERLYNFTKEVIN------ 679

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           +KD +          E D  +LS  +R L++  + M+   + +A   +   +  +D Y  
Sbjct: 680 MKDSEE--------REIDRWLLSKLNRALKDYHKLMEEFELRKAGILLSHYL--LDEYIH 729

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               W  ++   ++   + Y        L  +   F P LA +++++L
Sbjct: 730 ----WYRRRGGNNKELLLNYCET-----LVKMFAPFTPHLAEELWELL 768


>gi|298293832|ref|YP_003695771.1| isoleucyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930343|gb|ADH91152.1| isoleucyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 1019

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 6/50 (12%)

Query: 290 VFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           V +HGF+L  +G K+SKS+GNV+ P EVI+  G D LR ++     C  D
Sbjct: 674 VLTHGFVLDEQGRKMSKSIGNVVAPQEVIKSSGADILRLWV-----CASD 718


>gi|270015688|gb|EFA12136.1| hypothetical protein TcasGA2_TC002282 [Tribolium castaneum]
          Length = 896

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 16/88 (18%)

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANL--PLP-KKVFSHGFIL-HKGEKISKSLGNVIDP 313
           AD+++ G D  +F   +  + L S  L    P K ++ HGF++  KG K+SKS+GN++DP
Sbjct: 528 ADMYLEGVD--QFTGWFQSSLLTSVALRDKAPYKTIYVHGFVVDEKGMKMSKSVGNIVDP 585

Query: 314 IEVIEEV------GVDALRYFLVREIAC 335
           +++++        GVD LR++    +AC
Sbjct: 586 LDIVQGTKNKKAYGVDTLRWW----VAC 609



 Score = 41.2 bits (95), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 32/66 (48%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           Y N + H+GHA   I+ D + R+H L G  V +  G D HG  I   A +      + + 
Sbjct: 40  YANGKLHMGHALNKILKDTILRYHILKGHKVHYVPGWDCHGLPIELKALSKPGAEALEIR 99

Query: 75  QNSRNF 80
             +R+F
Sbjct: 100 SKARSF 105


>gi|269124972|ref|YP_003298342.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268309930|gb|ACY96304.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 465

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 4  REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
          R  +Y+  A   P A+PHIGH    +I DVL R+ R  G +V F     +   KI  AA 
Sbjct: 23 RVGMYVCGAT--PQAEPHIGHLRSGVIYDVLLRWLRHSGYEVTFVRNVTDVDDKIIAAAA 80

Query: 64 NAGVTTKVFVDQNSRNF 80
            GV      + N R F
Sbjct: 81 ERGVPWFALAEANQRIF 97


>gi|170078363|ref|YP_001735001.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169886032|gb|ACA99745.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 963

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 23/116 (19%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----N 283
           M VW D+ +++       D  +      +P DL++ G D    H  ++ + LL++    N
Sbjct: 540 MDVWFDSGSSWAAVAKQRDGLN------YPVDLYLEGSDQ---HRGWFQSSLLTSVAVNN 590

Query: 284 LPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE---------EVGVDALRYFL 329
           +   K V +HGF+L  KG K+SKSLGNV+DP  +I            G D LR ++
Sbjct: 591 VAPYKTVLTHGFVLDEKGYKMSKSLGNVVDPNIIINGGKNQKTEPPYGADVLRLWV 646


>gi|156065371|ref|XP_001598607.1| hypothetical protein SS1G_00696 [Sclerotinia sclerotiorum 1980]
 gi|154691555|gb|EDN91293.1| hypothetical protein SS1G_00696 [Sclerotinia sclerotiorum 1980
          UF-70]
          Length = 935

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 27/45 (60%)

Query: 5  EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTT 49
          EK+YI     YP+   H+GH     I+DVLARFH + G +V  TT
Sbjct: 45 EKMYILPMFPYPSGDLHLGHFRAYTISDVLARFHTMKGYNVEITT 89


>gi|21226416|ref|NP_632338.1| valyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74526566|sp|Q8Q024|SYV_METMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|20904675|gb|AAM30010.1| Valyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 869

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-AKAA 62
           R +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG     K  
Sbjct: 37  RPQYIIDTPPPYPTGNFHIGNALNWCYIDFVARYKRMRGYNVMFPQGWDCHGLPTEVKVE 96

Query: 63  QNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKR 101
           +  G+T     +Q  R  FR M   L     D +R T  R
Sbjct: 97  ETHGITK----NQVPRAEFRRMCRELTAGNIDKMRQTMLR 132



 Score = 45.4 bits (106), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 6/117 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           ++  W+D+    L  +G+    D       PA +   G DI+R  A Y    +  L    
Sbjct: 448 VLDTWMDSSITALHVSGWESEHDLRL----PAQIRPQGHDIIRTWAFYTILRSLALEGKR 503

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           P    V +   +   G K+SKSLGNVI P EV  +   DA R +     + G D  +
Sbjct: 504 PWDSIVINGMVLGPDGHKMSKSLGNVISPEEVTTQYSADAFRQWGAVGGSTGSDVMF 560


>gi|332111999|gb|EGJ11976.1| isoleucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 947

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 16/131 (12%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G +D +L  K+ D           I+ VW D+ + +        +P+G   +   ADL++
Sbjct: 541 GAEDAALYTKSSD-----------ILEVWFDSGSTFWHVL-RGQHPEGFHKQGPEADLYL 588

Query: 263 IGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
            G D  R  FH+    A  L    P  + + +HGF +  +G K+SKSLGN I+P +V   
Sbjct: 589 EGHDQHRGWFHSSLLLACALYGRAPY-RGLLTHGFTVDSQGRKMSKSLGNGIEPQKVSST 647

Query: 320 VGVDALRYFLV 330
           +G + +R ++ 
Sbjct: 648 LGAEIIRLWVA 658



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 15  YPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           Y N   H+GHA   ++ D++ +  +L G D  +  G D HG  I  A
Sbjct: 67  YANGAIHMGHAVNKVLKDMIVKARQLKGFDAQYVPGWDCHGLPIENA 113


>gi|320334412|ref|YP_004171123.1| Isoleucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755701|gb|ADV67458.1| Isoleucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 1087

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-----TFDWGIKIPDDPQY 226
           Y    L ++ S    ++ +    E+ +     L DL L R      TF+   K+      
Sbjct: 492 YWGTPLPFWVSEDGDLIVVGSVQELSALTGRDLTDLDLHRPYIDDITFEQDGKVYRRVPE 551

Query: 227 IMYVWIDA---------LTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILR--FHA 272
           ++ VW D+         L    T    L   + +KA+F   +PAD      D  R  F++
Sbjct: 552 VLDVWFDSGSMPYAQWHLLTDETGARALPGAEANKAQFERHYPADFISEAIDQTRGWFYS 611

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++  + +L    P  + V   G I+  KG K+SKS GNVI+PI + ++ G D++R+++
Sbjct: 612 LHAISTMLYGQ-PAYRNVICLGHIVDEKGAKMSKSKGNVIEPIPMFDKYGADSVRWYM 668


>gi|282859714|ref|ZP_06268815.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587525|gb|EFB92729.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 1220

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 255 FWPADLHVIGKDILR--FHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVI 311
           F+PAD    G D  R  F  ++  A ++  ++   K V S G +L  KG K+SK +GNVI
Sbjct: 727 FFPADFINEGVDQTRGWFFTLHAIATMVFDSVAF-KNVISTGLVLDAKGNKMSKHVGNVI 785

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            P E++++ G D +R++++       +  +D +G+
Sbjct: 786 SPFEMLDKYGADPVRFYMMTNSEPWDNLKFDPEGV 820


Searching..................................................done


Results from round 2




>gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254547812|gb|ACT56689.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 511

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 511/511 (100%), Positives = 511/511 (100%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK
Sbjct: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY
Sbjct: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY
Sbjct: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT
Sbjct: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG
Sbjct: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN
Sbjct: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL
Sbjct: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA
Sbjct: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL
Sbjct: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511


>gi|315122341|ref|YP_004062830.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495743|gb|ADR52342.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 512

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 413/510 (80%), Positives = 462/510 (90%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K REK YISTAIAYPNA+PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDE+GQKIAK+
Sbjct: 3   KGREKFYISTAIAYPNAKPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEYGQKIAKS 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQNAG+ TK+FVDQNS +FR MADV  ISYDDFIRTTEKRHHDTCRILW+KI DKGDIYK
Sbjct: 63  AQNAGIETKIFVDQNSADFRQMADVFGISYDDFIRTTEKRHHDTCRILWQKILDKGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G YSGWYSLRDE Y  DDEVYKG DGQ+YNAQ NPVQWMEEEGYFFRLSAYQDKLL+YY+
Sbjct: 123 GFYSGWYSLRDEMYCGDDEVYKGEDGQHYNAQKNPVQWMEEEGYFFRLSAYQDKLLAYYD 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHPEFILP+ERRNE++SFVKSGLKDLS+SRKTFDWGIKIP+DPQYIMYVWIDALTNYLT 
Sbjct: 183 SHPEFILPLERRNEIVSFVKSGLKDLSISRKTFDWGIKIPNDPQYIMYVWIDALTNYLTA 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           TG L +P+G KAKFWPADLHVIGKDI+RFHA+YWPAFLLSANLPLPK +FSHGFIL+KGE
Sbjct: 243 TGLLPHPNGEKAKFWPADLHVIGKDIVRFHAVYWPAFLLSANLPLPKTIFSHGFILNKGE 302

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           KISKSLGNVIDP+EVI+E+GVDALRYFL+R+IACGKDGFYD + +K RVNADLANGIGNL
Sbjct: 303 KISKSLGNVIDPMEVIKEIGVDALRYFLIRDIACGKDGFYDINTVKNRVNADLANGIGNL 362

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSRS+SMI+K+Y G++P PG F E D+ IL  CS+ +QEIRE+M  QLIHRA+AQVIS+V
Sbjct: 363 VSRSISMIVKNYGGVMPNPGVFVEFDKEILYACSQNIQEIREHMDGQLIHRAVAQVISIV 422

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           SEVDRYF  QKPW+L KT+ DRA+TVLYVTV+V+RQLAILLQ FVP +ANKIFDIL +AD
Sbjct: 423 SEVDRYFATQKPWDLVKTDRDRAATVLYVTVDVVRQLAILLQPFVPGMANKIFDILSIAD 482

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           ENR F  LDQRLK G ++ K F P+FPRFL
Sbjct: 483 ENRSFAHLDQRLKVGLVIDKDFMPLFPRFL 512


>gi|325292849|ref|YP_004278713.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060702|gb|ADY64393.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 516

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 300/513 (58%), Positives = 398/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG+DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  FR+M  +L+ S DDFIRTTE+RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY +DE    ADG  Y  Q  PV+W+EEE YFF+LS YQDKLL  Y
Sbjct: 121 KDSYAGWYSVRDEAYYGEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNE+ISFVKSGLKDLS+SR TFDWGIK+PDDP+++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+V++HGF+L+KG
Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++G+  R+NADLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IPTPG  T+ D+++L+    +L   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQIPTPGPLTDEDKAMLASADGLLALCREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF +Q+PW LKKT+P+R  TVLYVT EV+RQ+ ILLQ F+P    K+ D++   
Sbjct: 421 VSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPGSCEKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL PG  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVPGTPLEAP-KPVFPRYV 512


>gi|15888821|ref|NP_354502.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|25009368|sp|Q8UFA2|SYM_AGRT5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15156579|gb|AAK87287.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 516

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 300/513 (58%), Positives = 399/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG+DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  FR+M  +L+ S DDFIRTTE+RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY +DE    ADG  Y  Q  PV+W+EEE YFF+LS YQ+KLL  Y
Sbjct: 121 KDSYAGWYSVRDEAYYAEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQEKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNE+ISFVKSGLKDLS+SR TFDWGIK+PDDP+++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+V++HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++   G+D +RYF +RE++ G+DG Y ++G+  R+NADLANGIGN
Sbjct: 301 EKMSKSLGNVVDPANLVAHFGLDPVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IPTPGAF + D+++L+    +L   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQIPTPGAFNDDDKAMLASADGLLAVCREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF +Q+PW LKKT+P+R  TVLYVT EV+RQ+ ILLQ F+P+   K+ D++   
Sbjct: 421 VSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPQSCEKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL PG  L     P+FPR++
Sbjct: 481 ADGRDFTALGEAGRLAPGTPLEAP-KPVFPRYV 512


>gi|256751388|ref|ZP_05492267.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749770|gb|EEU62795.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 632

 Score =  516 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 230/509 (45%), Positives = 334/509 (65%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G           PV+ ++EEGYFFRLS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRPVERVKEEGYFFRLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNETLINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R  TVLY   E +R +A+L+  F+P    KIF+ L V +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|227822152|ref|YP_002826123.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341152|gb|ACP25370.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 516

 Score =  516 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 304/513 (59%), Positives = 395/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +   D+NS  F  MA+VL+ S DDFIRTTEKRHH+  + +W ++ + GD+Y
Sbjct: 61  TARKEGVSPQELADRNSAEFEKMAEVLNASNDDFIRTTEKRHHEASQAIWIRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRDDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGI++P+DP ++MYVW+DALTNYLT
Sbjct: 181 EDNPDFIGPSERRNEVISFVKSGLKDLSVSRTTFDWGIRVPNDPAHVMYVWVDALTNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGYL +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYLTDPSGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  TE DE++L+    +++  RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQIPACGPLTEEDEAMLAAADALIETTREEMGRQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P+R +TVLYVT EV+RQ+AILLQ F+P  A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPERMATVLYVTAEVVRQIAILLQPFMPDSAGKLLDLVAVP 480

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
            E R F  L    RL  G  L     P+FPR++
Sbjct: 481 AEKRDFVHLGKSGRLVSGTPLEAP-KPVFPRYI 512


>gi|20806639|ref|NP_621810.1| methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|25009362|sp|Q8RDD1|SYM_THETN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|20515086|gb|AAM23414.1| Methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 638

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 233/509 (45%), Positives = 336/509 (66%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+   +DISYD FIRTT+  H +  + ++ K+ ++GDIYKG 
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKTMDISYDHFIRTTDAYHEEIVQKIFMKLYEQGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G           PV+ + EEGYFFRLSAY DKLL YYE H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRPVERVTEEGYFFRLSAYGDKLLKYYEEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+K+GL+DL +SR TFDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKAGLEDLFVSRSTFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPKKVF HG+++ +G K+
Sbjct: 238 YMTENDEKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E+++  GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVDRYGVDAIRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P P +  E DE +++V   + Q++ E M       AL ++  LVS 
Sbjct: 358 RTVTMIEKYFDGVLPKPSSQEEIDEDLINVAQNLPQKVEEYMDKLQFSNALIEIWKLVSR 417

Query: 424 VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K      R  TVLY   E +R + IL+  F+P    K+F+ L + +
Sbjct: 418 ANKYIDETMPWVLAKDESKRGRLGTVLYNLAESLRFIGILISPFMPNTPKKMFEQLGITE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   ++SL   L       K  + +FPR 
Sbjct: 478 DLTTWESLKFGLLKEGTRVKRGEILFPRI 506


>gi|15965354|ref|NP_385707.1| methionyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307312729|ref|ZP_07592360.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|25009383|sp|Q92PX0|SYM_RHIME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15074534|emb|CAC46180.1| Probable methionyl-tRNA synthetase (methionine--tRNA ligase)
           [Sinorhizobium meliloti 1021]
 gi|306899454|gb|EFN30086.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 516

 Score =  515 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 296/513 (57%), Positives = 394/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  F++MA +L+ S DDFIRTTE+RHH+  + +W ++ + GD+Y
Sbjct: 61  TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRGDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYVT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG L +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG +P  G  T+ D+++L+    ++   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P R +TVLYVT EV+RQ+AILLQ F+P+ A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPSRMATVLYVTAEVVRQVAILLQPFMPESAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F  L +  RL  G  L     P+FPR++
Sbjct: 481 TDRRDFAHLGEAGRLVSGTPLEAP-KPVFPRYV 512


>gi|297543649|ref|YP_003675951.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841424|gb|ADH59940.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 632

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 227/509 (44%), Positives = 332/509 (65%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G           PV+ ++EEGYFF+LS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDNDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K + G++P      E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFGGILPKLSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R  TVLY   E +R +A+L+  F+P    KIF+ L V +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|150396508|ref|YP_001326975.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028023|gb|ABR60140.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 516

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 298/513 (58%), Positives = 395/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  F++MA +L+ S DDFIRTTEKRHH+  + +W ++ + GD+Y
Sbjct: 61  TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEKRHHEASQAIWTRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQD+LL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELREDGLRYGPQGTPVEWVEEESYFFRLSAYQDRLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYVT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGYL +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  T+ D+++L+    +++  RE M  QLIHRALA  I++
Sbjct: 361 LASRSLSMIVKNCDGQIPVCGPLTDEDKAMLAAADSLIETAREEMGRQLIHRALAATIAI 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P+R +TVLYVT EV+RQ+AILLQ F+P  A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPNRMATVLYVTAEVVRQVAILLQPFMPDSAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F  L +  RL  G  L     P+FPR++
Sbjct: 481 ADRRDFAHLGEGGRLVSGTPLEAP-KPVFPRYV 512


>gi|289577361|ref|YP_003475988.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527074|gb|ADD01426.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 633

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 226/509 (44%), Positives = 331/509 (65%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +++  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKNLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G           PV+ ++EEGYFF+LS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTYHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN  GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDFGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K + G++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFGGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R  TVLY   E +R +A+L+  F+P    KIF+ L + +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLAEALRFIAVLISPFMPNTPKKIFEQLGIEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|307317213|ref|ZP_07596654.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897301|gb|EFN28046.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 516

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 296/513 (57%), Positives = 394/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++    YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG +V F TGTDEHGQK+ +
Sbjct: 1   MRDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +    +NS  F++MA +L+ S DDFIRTTE+RHH+  + +W ++ + GD+Y
Sbjct: 61  TAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL +Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRGDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLKHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYVT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG L +P G +AKFWPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPAFLMSAGLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP  ++E  G+D +RYF +RE++ G+DG Y ++G+  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPFTLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG +P  G  T+ D+++L+    ++   RE M  QLIHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P R +TVLYVT EV+RQ+AILLQ F+P+ A K+ D++ V 
Sbjct: 421 VSETDRYFAGQEPWALKKTDPIRMATVLYVTAEVVRQVAILLQPFMPESAGKLLDLVAVP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F  L +  RL  G  L     P+FPR++
Sbjct: 481 TDRRDFAHLGEAGRLVSGTPLEAP-KPVFPRYV 512


>gi|323706295|ref|ZP_08117861.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534347|gb|EGB24132.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 635

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 229/508 (45%), Positives = 333/508 (65%), Gaps = 6/508 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT K +VD+     +D+ + +DIS D FIRTT+K+H +  + ++ K+ +KGDIYK  Y
Sbjct: 63  KGVTPKQYVDEIVAWIKDLWNTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E ++ + ++  G           PV+ ++EE YFF+LS Y DKLL YYE HP
Sbjct: 123 EGWYCTPCETFWTEKQLVDGN----CPDCGRPVELVKEESYFFKLSNYADKLLKYYEEHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  R NE++SF+KSGL+DL +SR +FDWG+K+P DP++++YVWIDAL+NY+T  GY
Sbjct: 179 DFIQPESRLNEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+S
Sbjct: 239 STDHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN  GNL+SR
Sbjct: 299 KSKGNVVDPKELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +V+M+ K +DG++P      + D+ ++S+ + + + +   M       ALA++  LV   
Sbjct: 359 TVTMVEKYFDGVVPEVSDKDDVDDELISIANNLPKVVESYMDKLQFSNALAEIWKLVGRA 418

Query: 425 DRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R  TVLY  VE +R +AIL+  F+P    KI++ L + D+
Sbjct: 419 NKYIDETMPWVLAKDESKKGRLKTVLYNLVESLRFVAILITPFMPNTPIKIYEQLGIDDD 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R + SL   L       K  + IFPR 
Sbjct: 479 LRTWDSLKFGLLKSGTKVKRGENIFPRI 506


>gi|167038518|ref|YP_001666096.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116914|ref|YP_004187073.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166857352|gb|ABY95760.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319930005|gb|ADV80690.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 633

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 229/509 (44%), Positives = 333/509 (65%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G            V+ ++EEGYFFRLS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R  TVLY   E +R +AIL+  F+P    KIF+ L + +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLAEALRFIAILISPFMPNTPKKIFEQLGIEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFSLLKVGTRVKRGEIIFPRI 506


>gi|307265681|ref|ZP_07547234.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389218|ref|ZP_08210786.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919325|gb|EFN49546.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994581|gb|EGD53005.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 633

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 226/509 (44%), Positives = 332/509 (65%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+   +DIS D FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKTMDISNDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G           PV+ ++EEGYFF+LS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPRHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVRKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K ++G++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFEGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R  TVLY   E +R +AIL+  F+P    K+F+ L +  
Sbjct: 418 ANKYIDETMPWILAKDESKKERLGTVLYNLAEALRFIAILISPFMPNTPQKMFEQLGIEK 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   ++SL   L       K  + IFPR 
Sbjct: 478 DLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|167038739|ref|YP_001661724.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913676|ref|ZP_07130993.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723309|ref|YP_003903060.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166852979|gb|ABY91388.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890361|gb|EFK85506.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580370|gb|ADN53769.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 632

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 228/509 (44%), Positives = 332/509 (65%), Gaps = 6/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G DV F TGTDEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K +VD      +D+  ++DISYD FIRTT+K H +  + ++ K+ +KGDIYK  
Sbjct: 62  EKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G            V+ ++EEGYFFRLS Y D+LL YY+ H
Sbjct: 122 YEGWYCTPCESFWTESQLVDGK----CPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+I+F+KSGL+DL +SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 178 PDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++ +G K+
Sbjct: 238 YSTDHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K + G++P P    E D+ +++    + + + E M       AL ++  LV  
Sbjct: 358 RTVTMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRR 417

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R  TVLY   E +R +A+L+  F+P    KIF+ L V +
Sbjct: 418 ANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++SL   L       K  + IFPR 
Sbjct: 478 NLTTWESLKFGLLKEGTKVKRGEIIFPRI 506


>gi|304315621|ref|YP_003850766.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777123|gb|ADL67682.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 636

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 226/508 (44%), Positives = 329/508 (64%), Gaps = 6/508 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI++ I YP+ + HIGH+Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+ 
Sbjct: 3   KTFYITSPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVMFLTGTDEHGQKIQRKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT K +VD+     +D+   +DIS D FIRTT+K+H +  + ++ K+ +KGDIYK  Y
Sbjct: 63  KGVTPKQYVDEIVAWIKDLWKTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E ++ + ++  G           PV+ ++EE YFF+LS Y DKLL YYE HP
Sbjct: 123 EGWYCTPCETFWTEKQLVDGN----CPDCGRPVELVKEESYFFKLSNYADKLLKYYEEHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  R NE++SF+KSGL+DL +SR +FDWG+K+P DP++++YVWIDAL+NY+T  GY
Sbjct: 179 DFIQPESRLNEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + D    K+WPAD+H++GK+I+RFH I WPA L++ +LPLPKKVF HG+++  G K+S
Sbjct: 239 STDHDEDFKKYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILDGGKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E++ + GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN  GNL+SR
Sbjct: 299 KSKGNVVDPKELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +V+M+ K +DG++P        D+ ++S+ + + + +   M       ALA++  LV   
Sbjct: 359 TVTMVEKYFDGVVPEASDKDNVDDELISIANDLPKIVEGYMDRLQFSNALAEIWKLVGRA 418

Query: 425 DRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R   VLY  VE +R +A+L+  F+P    KI++ L + D+
Sbjct: 419 NKYIDETMPWVLAKDESKKGRLKAVLYNLVESLRFVAVLITPFMPNTPIKIYEQLGIDDD 478

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R + SL   L       K  + IFPR 
Sbjct: 479 LRTWASLKFGLLKAGTKVKRGENIFPRI 506


>gi|116252220|ref|YP_768058.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256868|emb|CAK07962.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 516

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 295/513 (57%), Positives = 397/513 (77%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADSGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ ++ R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIRTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  GA  + D ++L+    +    RE+M  Q IHRALA +IS+
Sbjct: 361 LASRSLSMIVKNCDGKIPECGALNDEDRAMLAEVDALHASTREDMGKQQIHRALASIISV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P+R  TVLYVT EV+RQ+AILLQ F+P+ + K+ D++  A
Sbjct: 421 VSETDRYFAGQAPWALKKTDPERMGTVLYVTAEVVRQIAILLQPFMPESSAKLLDLVAAA 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVAGTALEAP-TPVFPRYV 512


>gi|86357775|ref|YP_469667.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281877|gb|ABC90940.1| methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 516

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 291/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGIAPQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMADNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLP++VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPQRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  T+ D+++L+    +    RE+M  Q IHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGKIPECGPLTDEDKAMLAQADALHASTREDMGKQQIHRALASIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P+ + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPESSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVAGTPLEAP-TPVFPRYV 512


>gi|190891834|ref|YP_001978376.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|190697113|gb|ACE91198.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 516

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 291/513 (56%), Positives = 394/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL++A LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMAAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  GA ++ D+++L+    +    RE+M  Q IHRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGKIPECGALSDEDKAMLAQADALHASTREDMGKQQIHRALASIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPVRMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLVAGTPLEAP-TPVFPRYV 512


>gi|241204713|ref|YP_002975809.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858603|gb|ACS56270.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 516

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 294/513 (57%), Positives = 395/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+PDDP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPDDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  GA ++ D+++L+    +    RE M  Q IHRALA +IS+
Sbjct: 361 LASRSLSMIVKNCDGKIPECGALSDEDKAMLAEVDALHASTREEMGKQQIHRALASIISV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P+R  TVLYVT EV+RQ+AILL+ F+P  + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPERMGTVLYVTAEVVRQIAILLRPFMPDSSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGEAGRLTAGTTLEAP-TPVFPRYV 512


>gi|312623342|ref|YP_004024955.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312203809|gb|ADQ47136.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 653

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 227/517 (43%), Positives = 330/517 (63%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +D+  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLVDGK----CPDCGRPVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+   K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG + +D L+ R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDALRTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +D +I  P A  + D  ++++   V +++   +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDEIIHLPEAKEDLDNELITLAKEVYEKVCRCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L +      R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 ADEN----RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + +       ++S  Q  L P     K  DPIFPR +
Sbjct: 478 SKDENPDITAWESASQFGLIPEGTKVKRGDPIFPRIV 514


>gi|312792522|ref|YP_004025445.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312179662|gb|ADQ39832.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 653

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 228/517 (44%), Positives = 331/517 (64%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLIDGK----CPDCGRPVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+   K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ ++ LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    E D  +  +   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGVIYLPEEKEEIDNELKDLAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K      R  TVLY   EV+R +AIL++ F+P+   KI + L +
Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILEQLGI 477

Query: 480 AD----ENRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +     E   +++  Q  L P     K  +PIFPR +
Sbjct: 478 SKDKNPEITAWETAGQFGLIPEGTKVKRGEPIFPRIV 514


>gi|209549396|ref|YP_002281313.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535152|gb|ACI55087.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 516

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 290/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIY
Sbjct: 61  TARAEGITAQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVSHFGLDQVRYFFLREVSFGQDGSYSEEAIGIRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  ++ D+++L+    +    R++M  Q IHRALA +IS+
Sbjct: 361 LASRSLSMIVKNCDGKIPECGVLSDEDKAMLAQADALHASTRDDMGKQQIHRALASIISV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ D++   
Sbjct: 421 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 481 ADKRDFAALGESGRLLAGTPLEAP-TPVFPRYV 512


>gi|312877507|ref|ZP_07737468.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795710|gb|EFR12078.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 653

 Score =  505 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 228/517 (44%), Positives = 330/517 (63%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLIDGK----CPDCGRPVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+   K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L+S  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMSLGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ ++ LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +D +I  P    E D  +  +   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDSVIYLPEEKEEIDNELKDIAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K      R  TVLY   EV+R +AIL++ F+P+   KI + L +
Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILEQLGI 477

Query: 480 AD----ENRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +     E   +++  Q  L P     K  +PIFPR +
Sbjct: 478 SKDKNPEITAWETAGQFGLIPEGTKVKRGEPIFPRIV 514


>gi|239825617|ref|YP_002948241.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805910|gb|ACS22975.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 648

 Score =  505 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 227/515 (44%), Positives = 337/515 (65%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVEGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T 
Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K +D  + P  GA T  D  ++      +++  E M+      ALA V  L
Sbjct: 358 LNRTVAMIEKYFDGMIPPYRGAKTAFDNDLVEKAKETVKQYEEAMEKMEFSIALASVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D  +PW L K     ++ ++V+    E +R +AILLQ F+ +   KIF  L 
Sbjct: 418 INRTNKYIDETQPWLLAKDEGKKEQLASVMTHLAESLRHVAILLQPFLTRTPEKIFAQLG 477

Query: 479 VADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           + DE  + + SL     +K G  + K  +P+FPR 
Sbjct: 478 IVDEQLKQWDSLYEFGLIKEGTKVTK-GEPLFPRL 511


>gi|327193417|gb|EGE60316.1| methionyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 519

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 293/513 (57%), Positives = 391/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 4   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGRDVFFLTGTDEHGQKMQQ 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+NS  F  MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIY
Sbjct: 64  TARAEGITAQALADRNSGEFEAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++Y
Sbjct: 124 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 184 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 244 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 304 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  ++ DE +L+    +    RE+M  Q IHRALA +I++
Sbjct: 364 LASRSLSMIVKNCDGKIPECGPLSDEDEVMLAQADALHASTREDMGKQQIHRALASIIAV 423

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q PW LKKT+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ DI+   
Sbjct: 424 VSETDRYFAGQAPWALKKTDPARMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDIVAAP 483

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL  G  L     P+FPR++
Sbjct: 484 ADKRAFAALGEAGRLVAGTPLEAP-TPVFPRYV 515


>gi|222528338|ref|YP_002572220.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455185|gb|ACM59447.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 653

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 228/517 (44%), Positives = 331/517 (64%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +D+  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLVDGK----CPDCGRPVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+   K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGISVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAILMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG + +D L+ R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDSLRTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P A  + D  ++++   V +++   +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGIIHLPEAKEDLDNELITLAKEVYEKVCRCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L +      R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 ADEN----RCFQSLDQR-LKPGFMLHKTFDPIFPRFL 511
           + +       ++S  Q  L P     K  DPIFPR +
Sbjct: 478 SKDENPDITTWESASQFSLIPEGTKVKRGDPIFPRIV 514


>gi|295401997|ref|ZP_06811959.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294975999|gb|EFG51615.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 648

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 229/515 (44%), Positives = 339/515 (65%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT+ RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFF++S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFKMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T 
Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 238 LGYGTDDDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IPT  GA T  D  ++      +++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPTYRGAKTPFDNDLVETAKETVKQYEEAMEKMEFSVALATVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D  +PW L K     ++ ++V+    E +R +AILLQ F+ +  +KIF  L 
Sbjct: 418 INRTNKYIDETQPWVLAKEESQKEQLASVMTHLAESLRHVAILLQPFLTRTPDKIFAQLG 477

Query: 479 VADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           + DE+ + + SL     +K G  + K  +P+FPR 
Sbjct: 478 IVDESLKQWDSLYEFGLIKEGTKVAK-GEPLFPRL 511


>gi|312109184|ref|YP_003987500.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311214285|gb|ADP72889.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 648

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 230/515 (44%), Positives = 339/515 (65%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT+ RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFF++S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFKMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY+T 
Sbjct: 178 NPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 238 LGYGTDDDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IPT  GA T  D  ++      +++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPTYRGAKTPFDNDLVETAKETVKQYEEAMEKMEFSVALATVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D  +PW L K     ++ ++V+    E +R +AILLQ F+ +  +KIF  L 
Sbjct: 418 INRTNKYIDETQPWVLAKEESQKEQLASVMTHLAESLRHVAILLQPFLTRTPDKIFAQLG 477

Query: 479 VADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           + DE+ + + SL     +K G  + K  DP+FPR 
Sbjct: 478 IVDESLKQWDSLYEFGLIKEGTKVAK-GDPLFPRL 511


>gi|288554646|ref|YP_003426581.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545806|gb|ADC49689.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 666

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 218/523 (41%), Positives = 335/523 (64%), Gaps = 14/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  Y++T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MSENKTFYLTTPIYYPSAKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T + FVD+   + + +   LDISYDDFIRTTE RH    + +++++ ++GDIY
Sbjct: 61  KAAEKGLTPQQFVDEIVADIQSLWKKLDISYDDFIRTTEDRHKKVVQTIFERLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND-------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE +Y +        +      G       +PV+ + E+ YFF++S Y 
Sbjct: 121 LDEYEGWYSIPDETFYTELQLVDPIRDEDGKIIGGKSPDSGHPVEKVREQSYFFKMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P FI P  RRNE+I+   K GL+DL++SR +F WG+++P +P++++YVWI
Sbjct: 181 DRLLKFYEENPTFIQPESRRNEMINNFIKPGLEDLAVSRTSFKWGVQVPSNPEHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  + D    K+WPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGQDNDEFYQKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +G  +RVN 
Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPETLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERVNY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K +DG IPT     T  D  +L + +  + ++   M+     
Sbjct: 361 DLANDLGNLLNRTVAMINKYFDGSIPTYVKDATPFDADLLDLVNATVTKVENAMEEMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  +  LVS  ++Y D  +PW L K +   +   +V+Y   E +R +++L+Q F+ + 
Sbjct: 421 VALTAIWQLVSRTNKYIDETQPWMLAKDDSKKEELGSVMYHLAESLRYISVLIQPFLTET 480

Query: 470 ANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             K+++ L + +E   ++SL +  ++  G  + K   PIFPR 
Sbjct: 481 PKKVWEQLGLGEEVTTWESLSEFAQIPAGVTVQK-GKPIFPRL 522


>gi|302870971|ref|YP_003839607.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573830|gb|ADL41621.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 653

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 228/517 (44%), Positives = 330/517 (63%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLVDGK----CPDCGRPVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+   K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ +D LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGYFSEDALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    E D  +  +   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGVIYHPEEEEEIDNELKRLAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K      R  TVLY   EV+R +A+L++ F+P+   KI   L +
Sbjct: 418 SRANKYIDQTMPWVLGKDKSKYPRLKTVLYNLAEVLRVVAVLIEPFMPQTTPKILQQLGI 477

Query: 480 ADEN----RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + +       ++S  Q  L P     K  +PIFPR +
Sbjct: 478 SKDENLDITTWESASQYGLIPEGTKVKRGEPIFPRII 514


>gi|222086010|ref|YP_002544542.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723458|gb|ACM26614.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 517

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 292/513 (56%), Positives = 393/513 (76%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+TAIAYPN +PHIGHAYE+I  D +ARF RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTEKTPFYITTAIAYPNGKPHIGHAYELIATDAMARFQRLDGRDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +   D+NS  F+ M  +L+ S DD+IRTTE+RHH+T R +W  ++D GDIY
Sbjct: 61  TARAEGLSPQELADRNSAEFQAMGKLLNSSNDDYIRTTEERHHETSRNIWNLMADAGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W++EE YFF+LS YQD+LL  Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVQEESYFFKLSEYQDRLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EENPDFIGPAERRNEVISFVKSGLKDLSISRTTFDWGIKVPNDPAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TGY+++ +  +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KG
Sbjct: 241 ATGYIEDRNNPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGN
Sbjct: 301 EKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI+K+ DG IP  G  TE D+++L+    +L   RE+M  Q +HRALA +I++
Sbjct: 361 LASRSLSMIVKNCDGKIPECGELTEEDKALLAQADALLASTREDMGKQALHRALASIIAV 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           VSE DRYF  Q+PW LKKT+P R +TVLYVT +V+RQ+ ILLQ F+P  + K+ D++ + 
Sbjct: 421 VSESDRYFAGQEPWALKKTDPARMATVLYVTADVVRQIGILLQPFMPDSSTKLLDLIAIP 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            + R F +L +  RL PG  L     P+FPR++
Sbjct: 481 SDKRDFAALGEAGRLVPGTPLEAP-KPVFPRYV 512


>gi|222148592|ref|YP_002549549.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735578|gb|ACM36541.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 525

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 291/510 (57%), Positives = 381/510 (74%), Gaps = 3/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAI+YPN +PHIGHAYE+I  D +ARF RLDG DV F TGTDEHGQK+ + A+
Sbjct: 2   KDTFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGKDVFFLTGTDEHGQKMQQTAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N G+  +    +NS  FR M  +L+ S DDFIRTTE RHH   + +WK++   GDIYK  
Sbjct: 62  NEGIAPEELAKRNSDEFRAMGKLLNASNDDFIRTTEARHHAASQEIWKRMEKNGDIYKDS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE    ADG  Y  Q  PV+W+EEE YFFRLSAY+DKLL  YE  
Sbjct: 122 YAGWYSVRDEAYYAEDETEMRADGVRYGPQGTPVEWVEEESYFFRLSAYEDKLLKLYEDQ 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P ERRNEV+SFVKSGLKDLS+SR TFDWGIK+P D +++MYVW+DALTNY+T TG
Sbjct: 182 PDFIGPNERRNEVLSFVKSGLKDLSMSRTTFDWGIKVPGDDKHVMYVWVDALTNYITATG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL + +G +AK+WPAD H+IGKDI+RFHA+YWPAFLLSA + LPK++F+HGF+L+KGEK+
Sbjct: 242 YLTDENGPRAKYWPADAHIIGKDIIRFHAVYWPAFLLSAGVALPKRIFAHGFVLNKGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP +++++ G+D +RYFL REI+ G+DG  + + +  R+NADLANGIGNL S
Sbjct: 302 SKSLGNVVDPFDLLQQFGLDNVRYFLCREISFGQDGNCNAELIAPRINADLANGIGNLAS 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ DG +P PG  TE+DE+IL+     +   RE M  Q IH+A+  ++++V+E
Sbjct: 362 RSLSMIAKNLDGKVPQPGPLTEADEAILATADEAIAICREEMSRQQIHKAVGAIMNIVNE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            DRYF AQ PW L+KT+  R  TVLYVT EV+RQ+AIL Q  +P  A K+ D++ +A ++
Sbjct: 422 ADRYFAAQAPWVLRKTDVPRMETVLYVTAEVVRQIAILFQPIMPDSAAKLLDLVAIAPDD 481

Query: 484 RCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
           R F  L    RL PG  L     P+FPR++
Sbjct: 482 RVFAKLGKAGRLTPGTELPA-VSPVFPRYV 510


>gi|146295253|ref|YP_001179024.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145408829|gb|ABP65833.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 655

 Score =  501 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 227/517 (43%), Positives = 330/517 (63%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD LAR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHIGHTYCTVAADTLARYKRLQGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G T + +VD+   + +D+  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEVGKTPQKYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLVDGK----CPDCGRPVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+   K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTLKWGIPVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ +D LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLAQKYGVDSLRYFLLREIPFGADGYFSEDALKTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    + D  ++++   V +++ + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGIIHLPEVKEDLDNELITLAKEVYEKVCKCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L   K+   R  TVLY   EV+R +AIL++ F+P+   K+   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKHPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKMLAQLGI 477

Query: 480 A-DENRCFQSLDQRLKPG----FMLHKTFDPIFPRFL 511
           + DEN    S +     G        K   P+FPR +
Sbjct: 478 SKDENPDITSWESAATFGLIRDGTKVKRDQPLFPRIV 514


>gi|209885248|ref|YP_002289105.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873444|gb|ACI93240.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 523

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 280/508 (55%), Positives = 372/508 (73%), Gaps = 2/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + YI+TAIAYPN  PHIGHAYE I  D LARF RLDG+DV F TGTDEHG K+ + AQ
Sbjct: 9   RSRYYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGMDVFFLTGTDEHGLKMIQTAQ 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T      +N+  F+DM   L+IS+D FIRT+E  HHD+ + +W++++  GDIY   
Sbjct: 69  KEGMTPAELATRNAARFKDMDRRLNISFDRFIRTSEVAHHDSTQEIWRRMAANGDIYLSS 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL+ YE H
Sbjct: 129 YAGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLALYEQH 188

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV+SFVK GLKDLS+SR TFDWG+K+PDDP+++MYVW+DALTNY+T   
Sbjct: 189 PEFIGPDVRRNEVVSFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWVDALTNYITGIN 248

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D +  K+WPAD+HVIGKDI+RFHA+YWPAFL+SA + +PK+V++HGF+ ++GEK+
Sbjct: 249 FPDEAD-ANWKYWPADVHVIGKDIIRFHAVYWPAFLMSAGIAVPKRVYAHGFLFNRGEKM 307

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP E+  + GVD LRYFL+RE+  G+DG Y+ + +  R NADLAN +GNL  
Sbjct: 308 SKSVGNVVDPFELANQYGVDQLRYFLLREVPFGQDGNYNHEAIVARTNADLANDLGNLAQ 367

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K + G++P PGAF+++D++IL+    +L + RE M  Q IH AL ++ ++V+E
Sbjct: 368 RSLSMIGKQHGGIVPEPGAFSDADKAILAQADAMLAQTREAMATQQIHVALNEIWTVVAE 427

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P    K+ D L +A E 
Sbjct: 428 ANRYFAGEAPWSLAKTDPARQKTVLYVTAEVVRQIAILAQPAMPGAMTKMLDSLAIAPEA 487

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F SL  R+KPG  L     P+FPR++
Sbjct: 488 RYFASLATRIKPGTQLP-PPAPVFPRYV 514


>gi|312128513|ref|YP_003993387.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778532|gb|ADQ08018.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 653

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 224/517 (43%), Positives = 328/517 (63%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + HIGH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSEKLHIGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G T + +VD+   + +D+  +++ISYDDFIRTTE RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEVGKTPQEYVDEIVASIKDLWKLMNISYDDFIRTTEDRHKKVVQKIFTKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLVDGK----CPDCGRPVERAREESYFFRLSKYQDALVKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  R NE+I+   K GL+D+ +SR T  WGI +P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSKFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKMVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG + +D LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGHFSEDALKTRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I       + D  ++++   V +++ + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGIIHLTEEKEDLDNELITLAKEVYEKVCKCLDELQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L +      R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 ARANKYIDETMPWVLGRDKSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 ADEN----RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + +       ++S  Q  L P     +  +PIFPR +
Sbjct: 478 SKDENPDITAWESASQFGLIPEGTKVQRGEPIFPRIV 514


>gi|312134269|ref|YP_004001607.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774320|gb|ADQ03807.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 653

 Score =  500 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 227/517 (43%), Positives = 331/517 (64%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI+T I YP+ + H+GH Y  + AD +AR+ RL G DV F TGTDEHGQKI + A
Sbjct: 2   EKPKFYITTPIYYPSDKLHVGHTYCTVAADTIARYKRLRGYDVFFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T + +VD+   + +++  +++ISYDDFIRTTE+RH    + ++ K+ ++GDIYK 
Sbjct: 62  QEAGKTPQEYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFSKLYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   EE YFFRLS YQD L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWLDRQLVDGK----CPDCGRPVERAREESYFFRLSKYQDALMKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI+P  R NE+I+   K GL+D+ +SR T  WGI++P DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIVPQSRANEMINNFIKPGLEDVCVSRTTIKWGIEVPFDPKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPAD+H++GK+I+RFH I WPA L++  LPLPK VF HG++L +G 
Sbjct: 238 LGYMSEDDSRFKKYWPADVHLVGKEIVRFHTIIWPAMLMALGLPLPKTVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + ++ GVD+LRYFL+REI  G DG++ ++ LK R N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILAQKYGVDSLRYFLLREIPFGADGYFSEEALKNRHNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG+I  P    E D  + S+   V + + + +       AL ++  L+
Sbjct: 358 LSRTVAMIEKYFDGVIYLPEEKEEIDNELSSLAKEVYENVCKLLDEFQFSNALIEIWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K +    R  TVLY   EV+R +AIL++ F+P+   KI   L +
Sbjct: 418 SRANKYIDQTMPWVLGKDSSKYPRLKTVLYNLAEVLRIVAILIEPFMPQTTPKILQQLGI 477

Query: 480 ADEN----RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           + +       ++S  Q  L P     K  + +FPR +
Sbjct: 478 SKDENLDITTWESASQFGLIPEGTKVKRGEHVFPRII 514


>gi|299133888|ref|ZP_07027082.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591724|gb|EFI51925.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 523

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 267/510 (52%), Positives = 366/510 (71%), Gaps = 2/510 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R + YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ + 
Sbjct: 7   SSRSRFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQT 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ   +T      +N+  F++M   L+IS+D FIRT+E  HH + + +W++++  GDIY 
Sbjct: 67  AQKENMTPHELATRNAGRFKEMDQRLNISFDRFIRTSEPAHHASTQEIWRRMAASGDIYL 126

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL  YE
Sbjct: 127 DSYAGWYSVRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLYE 186

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P+FI P  RRNE++SFVK GLKDLS+SR TFDWG+K+P+DP+++MYVW+DALTNY+T 
Sbjct: 187 SQPDFIGPDSRRNEIVSFVKGGLKDLSISRTTFDWGVKVPNDPEHVMYVWVDALTNYITG 246

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D    +  K+WPAD+H+IGKDI+RFHA+YWPAFL++A +P+PK+V++HGF+ ++GE
Sbjct: 247 IGFPDEKA-ANWKYWPADVHIIGKDIIRFHAVYWPAFLMAAGIPVPKRVYAHGFLFNRGE 305

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP  + ++ GVD +RYF +RE+  G+DG Y+ + +  R NADLAN +GNL
Sbjct: 306 KMSKSVGNVVDPFVLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARTNADLANDLGNL 365

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SMI K + G++P PG F+++D++IL+    +L + R+ M  Q IH AL  + ++V
Sbjct: 366 AQRSLSMIGKQHGGIVPEPGTFSDNDKAILAQADAMLAQARDAMATQQIHVALNAIWAVV 425

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P+   K+ DIL V  
Sbjct: 426 AEANRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPEAMTKMLDILAVPA 485

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           E R F +L  R+ PG  L     P+FPR++
Sbjct: 486 ETRDFAALANRIAPGTQLP-PPTPVFPRYV 514


>gi|316934061|ref|YP_004109043.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601775|gb|ADU44310.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 514

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 277/511 (54%), Positives = 365/511 (71%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAI+YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T      +N+  FRDM D   ISYD FIRT+E++HH + + +WK++   GDIY
Sbjct: 61  TAQREGMTPAELAARNAGRFRDMDDRFGISYDRFIRTSEEQHHASVQEVWKRMQASGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY +DE   G DG     Q  PV+W+EE+ YFF+LSAYQD+LL  Y
Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGEDGVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T
Sbjct: 181 EEQPDFIGPDARRNEVISFVKGGLKDLSVSRTTFDWGVKVPSDPEHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D     +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDESD-KNWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++MI K  DG +P  GAF+E+D +IL++   ++ + R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMIAKQCDGKVPEHGAFSENDSAILAMADGMIAQARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ DIL +A
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + R F +L  R+ PG  L     PIFPR++
Sbjct: 480 ADARDFAALPTRIVPGTPLPAPA-PIFPRYV 509


>gi|114704621|ref|ZP_01437529.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539406|gb|EAU42526.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 518

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 285/509 (55%), Positives = 371/509 (72%), Gaps = 3/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y++TAI+YPN +PHIGHAYE+I  D LARF RLDG DV F TGTDEHG K+ + A+ 
Sbjct: 3   ERYYLTTAISYPNGKPHIGHAYELIATDALARFKRLDGYDVFFLTGTDEHGIKMLQNARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D NS  F+ M+  L  S DDFIRT+E RH   C+ +WK++ + GDIYK  Y
Sbjct: 63  QGLTPRELADANSAEFQRMSAALGGSNDDFIRTSEARHKIACQAIWKRMEEAGDIYKDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE +   DG     Q  PV W+EEE YFFRLS +QD LL  Y  +P
Sbjct: 123 SGWYSVRDEAYYGEDETHISEDGTRIGPQGTPVDWIEEESYFFRLSNFQDPLLKLYAENP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P ERRNEVISFVKSGL+DLS+SR TFDWGI +P D +++MYVW+DALTNYLT TGY
Sbjct: 183 DFIGPNERRNEVISFVKSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTATGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++ +G + +FWPADLHVIGKDI RFH +YWPAFL+SA LPL K+V++HGF+ ++GEK+S
Sbjct: 243 PEDGNGGRTEFWPADLHVIGKDITRFHTVYWPAFLMSAGLPLCKRVYAHGFLFNRGEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNVIDP  +++  G+D LRYFL+RE+  G+DG Y  DG+  R N++LAN +GNL  R
Sbjct: 303 KSVGNVIDPFALVDTYGLDRLRYFLLREVPFGQDGNYSHDGIVNRTNSELANDLGNLAQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K  +G +P PGAFTE+DE IL     +L + RE ++ Q +H+ LA +I +VS+ 
Sbjct: 363 SLSMVAKHCEGRVPDPGAFTEADELILKAAGDLLAQCREAVEKQQLHQVLAAIIGVVSQA 422

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  ++PW L+KT+ DR  TVLYVT EV+R +AILLQ F P+ A K+ DIL V +++R
Sbjct: 423 NRYFAGEEPWALRKTDFDRMQTVLYVTAEVLRTVAILLQPFTPESAGKLLDILGVQEDDR 482

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L    RL PG  L     PIFPRF+
Sbjct: 483 GFDELTKGTRLAPGASLPAP-KPIFPRFV 510


>gi|125974586|ref|YP_001038496.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004052|ref|ZP_05429037.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714811|gb|ABN53303.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991975|gb|EEU02072.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941704|gb|ADU75738.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 654

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/513 (41%), Positives = 321/513 (62%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A
Sbjct: 2   DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K +VD+     +++  +L I+ D FIRTT+  H  T + ++KK+ D+GDIYK 
Sbjct: 62  KEKGVTPKQYVDEIVAGIKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++   ++  G            V+  +EE YFFRLS YQD+L+ + E 
Sbjct: 122 EYEGWYCTPCESFWTKTQLVDGK----CPDCGREVELTKEESYFFRLSKYQDRLIKHIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P+ R+NE+++   + GL+DL +SR TFDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 NPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             Y+   D    K+WPAD+H++GK+I+RFH I WPA L++   PLPK+VF HG++L +G 
Sbjct: 238 LNYMSEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++E+ GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVEKYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+V+MI K + G +P      E D+ ++   +   Q++ E +       AL ++   +
Sbjct: 358 VSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K   N  R + VLY   E IR ++IL+Q F+P+   KI+  L +
Sbjct: 418 SRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGI 477

Query: 480 ADEN--RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            D+       +    + P        +P+FPR 
Sbjct: 478 NDKKYVEWETAKKWGVYPEGAAVNKGEPLFPRI 510


>gi|229542295|ref|ZP_04431355.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326715|gb|EEN92390.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 655

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 230/518 (44%), Positives = 335/518 (64%), Gaps = 12/518 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E+ K  YI+T I YP+   HIGHAY  +  D +AR+ RL G DV+F TGTDEHGQKI 
Sbjct: 1   MEEKRKTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGFDVMFLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+  GVT + +VD+     +D+   L+IS DDFIRTT+ RH      ++KK+ D+GDI
Sbjct: 61  RKAKEKGVTPQQYVDEIVAGIQDLWKKLEISNDDFIRTTQDRHKKAVEKIFKKLLDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y GWY    E+++ + ++  G           PV+ ++EE YFF++  Y D+LL Y
Sbjct: 121 YLGEYEGWYCTPCESFFTERQLVDGK----CPDCGRPVEKVKEESYFFKMGKYVDRLLQY 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDALTNY
Sbjct: 177 YEENPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALTNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY  + D +  K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF+HG++L 
Sbjct: 237 ITALGYGSDDDSNYRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFAHGWLLM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNVIDP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +
Sbjct: 297 KDGKMSKSKGNVIDPVTLIDRYGLDALRYYLLREVPFGADGIFTPEGFVERINFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ + +DG+IPT  G+       +++     +++  + M+N     ALA +
Sbjct: 357 GNLLNRTIAMMNQYFDGVIPTFAGSHNPYSIQLVTAYKEAVKKYEDAMENMQFSVALASL 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS  ++Y D   PW L K    RA  + V+    E +R +AILLQ F+     KIFD
Sbjct: 417 WEFVSRTNKYIDETTPWTLAKDETKRADLAEVMVHLAESLRHIAILLQPFLTSTPKKIFD 476

Query: 476 ILFVADENR-CFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
            L + DE+   ++  SL   +  G  + K   PIFPR 
Sbjct: 477 QLNITDESLHTWESLSLFGSIPEGTKVVKKGKPIFPRL 514


>gi|281419111|ref|ZP_06250128.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407260|gb|EFB37521.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 654

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/513 (41%), Positives = 321/513 (62%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A
Sbjct: 2   DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K +VD+     +++  +L I+ D FIRTT+  H  T + ++KK+ D+GDIYK 
Sbjct: 62  KEKGVTPKQYVDEIVAGIKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++   ++  G            V+  +EE YFFRLS YQD+L+ + E 
Sbjct: 122 EYEGWYCTPCESFWTKTQLVDGK----CPDCGREVELTKEESYFFRLSKYQDRLIKHIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P+ R+NE+++   + GL+DL +SR TFDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 NPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             Y+   D    K+WPAD+H++GK+I+RFH I WPA L++   PLPK+VF HG++L +G 
Sbjct: 238 LNYMSEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++E+ GVDA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVEKYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+V+MI K + G +P      E D+ ++   +   Q++ E +       AL ++   +
Sbjct: 358 VSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K   N  R + VLY   E IR ++IL+Q F+P+   KI+  L +
Sbjct: 418 SRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGI 477

Query: 480 ADEN--RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            D+       +    + P        +P+FPR 
Sbjct: 478 NDKKYVEWETAKKWGVYPEGAAVNKGEPLFPRI 510


>gi|153009409|ref|YP_001370624.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561297|gb|ABS14795.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 515

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 280/509 (55%), Positives = 372/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MADVL+ S DD+IRT+E+RH+   + +WK ++  GDIYKG
Sbjct: 62  RKEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMAGNGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE 
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  K  +WPAD H+IGKDI RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTSD-EKWGYWPADAHIIGKDISRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP  ++E  G+D LRYFL+RE+  G+DG Y  D +  R NADLAN +GNL 
Sbjct: 301 MSKSLGNVIDPFGLVERYGLDQLRYFLMREVPFGQDGSYSHDAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PG F+++D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPVPGEFSDADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EVIR++ I++Q F+P+ A K+ DIL +  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVIRRVGIMVQPFIPQSAEKLLDILAIPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFSDVTASQLVGGADLPAPQPVFPRYV 509


>gi|319654959|ref|ZP_08009033.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393384|gb|EFV74148.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 654

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 218/518 (42%), Positives = 338/518 (65%), Gaps = 13/518 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+++ +  Y++T I YP+   HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI 
Sbjct: 1   MEDKLKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRMRGFDVMYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+  G+T + +VD+     +++   LDISYDDFIRTT+ RH      ++ ++ ++GDI
Sbjct: 61  EKAEEKGITPQQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKQIVEKIFAQLVEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y GWY    E+YY + ++  G           PV  ++EE YFF++S Y D+LL Y
Sbjct: 121 YLGEYEGWYCTPCESYYTERQLVDGN----CPDCGRPVHKVKEESYFFKVSKYADRLLQY 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P++P++++YVWIDAL+NY
Sbjct: 177 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPNNPKHVVYVWIDALSNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY  + D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 237 ITALGYGTDDDSKYLNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +
Sbjct: 297 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERINFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K +DG+IP+   +  E D+ +L +    + +  E M+      AL+ V
Sbjct: 357 GNLLNRTIAMVNKYFDGVIPSYKDSNGEFDQQLLQMNRETVSKYEEAMEKMEFSVALSAV 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             LVS  ++Y D  +PW L K    R   ++V+    E +R++A+LLQ F+ +   ++F 
Sbjct: 417 WQLVSRTNKYIDETQPWALAKEEEKREDLASVMAHLAESLRRIAVLLQPFLTRTPKEVFS 476

Query: 476 ILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            L V +E    ++SL+    +  G  + K  +PIFPR 
Sbjct: 477 QLNVNEEALTSWESLEKFGLIPEGTKVLK-GEPIFPRL 513


>gi|239831997|ref|ZP_04680326.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824264|gb|EEQ95832.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 525

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 283/510 (55%), Positives = 376/510 (73%), Gaps = 3/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G DV F TGTDEHG K+ ++A
Sbjct: 14  SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGKDVFFLTGTDEHGIKMLQSA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MADVL+ S DD+IRT+E+RH+   + +WK ++D GDIYKG
Sbjct: 74  RKEGITPRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMADNGDIYKG 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLS+YQD+LL  YE 
Sbjct: 134 GYAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSSYQDRLLDLYEQ 193

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 194 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 253

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  DG K  +WPAD H+IGKDI RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++GEK
Sbjct: 254 GYPDTTDG-KWGYWPADAHIIGKDISRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRGEK 312

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP  ++E  G+D LRYFL+RE+  G+DG Y  D +  R NADLAN +GNL 
Sbjct: 313 MSKSLGNVIDPFGLVERYGLDQLRYFLMREVPFGQDGSYSHDAIVNRTNADLANDLGNLA 372

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PG F+E+D++IL      L   R+ M +Q +H AL  + ++V+
Sbjct: 373 QRSLSMIAKNCEGKVPVPGEFSEADKAILDQAEAALDTARKAMDDQALHLALGGIFAVVA 432

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EVIR++ I++Q F+P+ A K+ DIL +  +
Sbjct: 433 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVIRRVGIMVQPFIPQSAEKLLDILAIPAD 492

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
            R F  +   +L  G  L     P+FPR++
Sbjct: 493 KRQFSDVTASQLVGGTDLPAP-QPVFPRYV 521


>gi|329929628|ref|ZP_08283327.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328936005|gb|EGG32459.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 662

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 220/517 (42%), Positives = 329/517 (63%), Gaps = 12/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MADKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +D+   LDIS +DFIRTTEKRH    + +++++  + DIY
Sbjct: 61  KAAEAGKTPQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQEVFERLLKQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ + ++  G           PV+ ++EE YFFR+S Y D+LL YY
Sbjct: 121 KGEYEGWYCTPCESFFLERQLVNGN----CPDCGRPVELVKEESYFFRMSKYVDRLLQYY 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E +P+FI P+ R+NE+I+   K GL+DL++SR T++WG+K+  DP++++YVWIDAL NY+
Sbjct: 177 EENPDFIQPVSRKNEMINNFIKPGLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY         K+WPAD+H++ K+I+RFH IYWP  L++ ++PLPKKVF+HG++L K
Sbjct: 237 TALGYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMK 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +RVN+DLAN +G
Sbjct: 297 DGKMSKSKGNVVDPVTMIDRYGLDALRYYLLREVPFGADGTFTPESFVERVNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+V+M+ K +DG +P   A  T  D +I      V  ++   M+N     AL  + 
Sbjct: 357 NLLNRTVAMVDKYFDGEVPAFSAGVTPFDAAIEEAAKSVYDKVETAMENMEFSVALTAIS 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             VS  ++Y D  +PW L K    R   ++V+   VE +R  +ILLQ F+ +   K+++ 
Sbjct: 417 QFVSRSNKYIDETQPWTLAKDESKRHELASVMSHLVETLRIASILLQPFLTRTPKKMWEQ 476

Query: 477 LFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           L +A+ E   ++S  Q   +  G  L K  +PIFPR 
Sbjct: 477 LGLAEGELTTWESGRQLGAIPAGTKLQK-GEPIFPRL 512


>gi|294852413|ref|ZP_06793086.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294821002|gb|EFG38001.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 544

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 375/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 31  SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 91  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 151 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 210

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +  FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 211 NLGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 270

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 271 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 329

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 330 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 389

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 390 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 449

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 450 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 509

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 510 KRQFADVLASPLAGGTDLPAPQPVFPRYV 538


>gi|306843870|ref|ZP_07476465.1| methionyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275625|gb|EFM57349.1| methionyl-tRNA synthetase [Brucella sp. BO1]
          Length = 515

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 375/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E     DG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-KRWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEAARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVQASPLAGGTDLPAPQPVFPRYV 509


>gi|148560370|ref|YP_001258936.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371627|gb|ABQ61606.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 515

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYTGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|256159715|ref|ZP_05457462.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254977|ref|ZP_05460513.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222163|ref|ZP_05936444.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265998128|ref|ZP_06110685.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920747|gb|EEX87400.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262552596|gb|EEZ08586.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 515

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GW+S+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWHSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|23501876|ref|NP_698003.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225627473|ref|ZP_03785510.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701747|ref|ZP_05163575.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706809|ref|ZP_05168637.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710081|ref|ZP_05171892.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714082|ref|ZP_05175893.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716862|ref|ZP_05178673.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031577|ref|ZP_05445191.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|260168708|ref|ZP_05755519.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218663|ref|ZP_05932944.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261314276|ref|ZP_05953473.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317630|ref|ZP_05956827.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321839|ref|ZP_05961036.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261752300|ref|ZP_05996009.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261758184|ref|ZP_06001893.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988665|ref|ZP_06101222.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|25009345|sp|P59078|SYM_BRUSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23347815|gb|AAN29918.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225617478|gb|EEH14523.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260923752|gb|EEX90320.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294529|gb|EEX98025.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296853|gb|EEY00350.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303302|gb|EEY06799.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738168|gb|EEY26164.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261742053|gb|EEY29979.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|264660862|gb|EEZ31123.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 515

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|237815420|ref|ZP_04594418.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790257|gb|EEP64467.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 530

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 17  SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 77  RKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 136

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 137 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 196

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 197 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 256

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 257 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 315

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 316 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 375

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 376 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 435

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 436 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 495

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 496 KRQFADVLASPLAGGTDLPAPQPVFPRYV 524


>gi|256061087|ref|ZP_05451242.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325089|ref|ZP_05964286.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301069|gb|EEY04566.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 515

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPRDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|254704289|ref|ZP_05166117.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754957|ref|ZP_05998666.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261744710|gb|EEY32636.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 515

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|306840483|ref|ZP_07473242.1| methionyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289498|gb|EFM60716.1| methionyl-tRNA synthetase [Brucella sp. BO2]
          Length = 515

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILGQADAALEAARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|225852500|ref|YP_002732733.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256113542|ref|ZP_05454368.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264009|ref|ZP_05466541.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|265994915|ref|ZP_06107472.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|225640865|gb|ACO00779.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|262766028|gb|EEZ11817.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263094153|gb|EEZ18075.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409016|gb|ADZ66081.1| methionyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538726|gb|ADZ86941.1| methionyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 515

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 377/509 (74%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   +++W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|161618949|ref|YP_001592836.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566464|ref|ZP_05836934.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335760|gb|ABX62065.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260155982|gb|EEW91062.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 515

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 375/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVK GLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKLGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|17987270|ref|NP_539904.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17982947|gb|AAL52168.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 544

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 31  SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   +++W+ +   GDIYKG
Sbjct: 91  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKG 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 151 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 210

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 211 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 270

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 271 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 329

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 330 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 389

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 390 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 449

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL    +
Sbjct: 450 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAAPAD 509

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 510 KRQFADVLASPLAGGTDLPAPQPVFPRYV 538


>gi|256369417|ref|YP_003106925.1| methionine--tRNA ligase [Brucella microti CCM 4915]
 gi|255999577|gb|ACU47976.1| methionine--tRNA ligase [Brucella microti CCM 4915]
          Length = 515

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGTIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|163843264|ref|YP_001627668.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673987|gb|ABY38098.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 515

 Score =  495 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 375/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P P AF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPSAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|62289919|ref|YP_221712.1| methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699846|ref|YP_414420.1| methionyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024161|ref|YP_001934929.1| methionine--tRNA ligase [Brucella abortus S19]
 gi|254697361|ref|ZP_05159189.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730259|ref|ZP_05188837.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260545332|ref|ZP_05821073.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260757954|ref|ZP_05870302.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761777|ref|ZP_05874120.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196051|gb|AAX74351.1| MetG, methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615947|emb|CAJ10970.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Methionyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189019733|gb|ACD72455.1| methionine--tRNA ligase [Brucella abortus S19]
 gi|260096739|gb|EEW80614.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260668272|gb|EEX55212.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672209|gb|EEX59030.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 515

 Score =  495 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 279/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|152973886|ref|YP_001373403.1| methionyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022638|gb|ABS20408.1| methionyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 659

 Score =  495 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 339/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EEKKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +D+ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTPQAYVDDIVAGIKDLWNKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +        +P     V+ + E  YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMENGKVVGGKSPDSGHAVELVREASYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWGI++P +P++++YVW+DA
Sbjct: 183 LLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY         KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENAEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP      TE DE++++  +  LQ++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFDGQIPAFKEKVTEFDEALVNFATDTLQKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +   +S  ++Y D  +PW L K   DR   ++V+    E++RQ +I+L  F+   + 
Sbjct: 423 LSSIWQFISRTNKYIDETQPWVLAKDEKDREKLASVMAHLAEMLRQTSIMLMPFLTTTSG 482

Query: 472 KIFDILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + DE  + ++SL     +  G  + K   PIFPR 
Sbjct: 483 KIFEQLGITDEAYQSWESLSTIGCIPTGTKVVK-GQPIFPRL 523


>gi|254719073|ref|ZP_05180884.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984063|ref|ZP_06096798.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838355|ref|ZP_07471200.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662655|gb|EEZ32916.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406495|gb|EFM62729.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 515

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 280/509 (55%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-KRWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  V ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEAARKAMDDQALHLALGAVFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPTD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|254693711|ref|ZP_05155539.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213983|ref|ZP_05928264.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915590|gb|EEX82451.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 515

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ + +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAIDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|15612616|ref|NP_240919.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|25009402|sp|Q9KGK8|SYM_BACHD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10172665|dbj|BAB03772.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 660

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 217/521 (41%), Positives = 333/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G +V++ TGTDEHGQKI + 
Sbjct: 3   KEQKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYNVMYLTGTDEHGQKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K FVD+     +D+   LDISYDDFIRTTE+RH    + +++++ D+GDIY 
Sbjct: 63  AEAKGLTPKQFVDEIVSGIQDLWKKLDISYDDFIRTTEERHIKVVQQIFEQLLDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           G Y GWYS+ DE +Y + ++            G       +PV+ + E+ YFFR+S Y D
Sbjct: 123 GDYEGWYSIPDETFYTETQLVDKEYDADGNLIGGKSPDSGHPVEKVREQSYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P+FI P  R+NE+I+   K GL+DL++SR +F WG+ +P DP++++YVWID
Sbjct: 183 RLLQFYEENPQFIQPESRKNEMINNFIKPGLEDLAVSRTSFTWGVPVPRDPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +       +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 243 ALSNYITALGYGSDQQEKYENYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVPLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG IP+     T  D  ++ +    ++++ + M+      
Sbjct: 363 LANDLGNLLNRTVAMIEKYFDGKIPSYVKDGTPFDADLVELVYSTVKKVEDAMEEMEFSI 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  +  L+S  ++Y D  +PW L K     ++    +Y   E IR +++LLQ F+ K  
Sbjct: 423 ALTAIGQLISRTNKYIDETQPWVLAKDESKREQLGAAMYHLAESIRYVSVLLQPFMTKAP 482

Query: 471 NKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
            KI++ L +      ++SL+   + PG    +   P+FPR 
Sbjct: 483 QKIWEQLGIDSSLTTWESLETFGQIPGNTNVQKGQPLFPRL 523


>gi|317126779|ref|YP_004093061.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471727|gb|ADU28330.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 656

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 216/517 (41%), Positives = 332/517 (64%), Gaps = 11/517 (2%)

Query: 1   MKE-REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E R+  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV+F TGTDEHGQKI 
Sbjct: 1   MSEARKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVMFLTGTDEHGQKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A++ GV+ + FVD   +  + +   LDISYDDFIRTTE+RH    + ++ ++  +GDI
Sbjct: 61  RKAEDKGVSPQQFVDDIVKTIKSLWSKLDISYDDFIRTTEERHKKVVQKIFDQLLQQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y   Y G Y    E+++ D +   G           PV+ ++EE YFFR+S Y D+LL Y
Sbjct: 121 YLDQYEGLYCTPCESFFTDYQAKDGK----CPDCSRPVEKVQEESYFFRMSKYADRLLKY 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P+FI P  R+NE+I+   K GL+DL++SR +FDWGI +  +P++++YVWIDAL+NY
Sbjct: 177 YEENPDFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGINVKSNPEHVVYVWIDALSNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG++L 
Sbjct: 237 ITALGYGSDDETLYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGHGWLLM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +IE  G+DALRY+L+RE+  G DG +  +G   RVN DLAN +
Sbjct: 297 KDGKMSKSKGNVVDPVPLIERYGLDALRYYLLREVPFGSDGTFTPEGFVDRVNYDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K +DG +P      T  DES++   +  ++++ + M++     AL  +
Sbjct: 357 GNLLNRTVAMINKYFDGEMPKYIKNATSYDESLVDHVNATVKKVEDAMEDMEFSVALTAI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             LVS  ++Y D  +PW + +     ++  +V+Y   E +R ++IL+Q F+ +   KI++
Sbjct: 417 WQLVSRTNKYIDETQPWIIARDETAKEQLGSVMYHLAESLRYISILIQPFLTEAPKKIWE 476

Query: 476 ILFVADENRCFQSLDQRLK--PGFMLHKTFDPIFPRF 510
            L + ++   + +L    K   G  +    +P+FPR 
Sbjct: 477 QLGITEDQTVWSTLQDFGKTESGTKVVTKGEPLFPRL 513


>gi|56961843|ref|YP_173565.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56908077|dbj|BAD62604.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 655

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 215/523 (41%), Positives = 333/523 (63%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIGH Y  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MSEK-TFYITTPIYYPSGKLHIGHTYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIEQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++   + ++  +  +++   LDIS+DDFIRTTEKRH +    +++++ ++GDIY
Sbjct: 60  KAKEKGISPLEYTNEMVKPIKELWKKLDISHDDFIRTTEKRHTNMVEKIFEQLVEQGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            G Y GWY + DE +Y + E+            G       +PV+ + E+ YFFR+S Y 
Sbjct: 120 LGEYEGWYCVSDETFYGERELVDPIKDESGNIIGGKSPDSGHPVEKVREKSYFFRMSKYA 179

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL++YE +P+FI P  R+NE+I+   K GL+DL++SR +F WG+K+P +P++++YVWI
Sbjct: 180 DRLLAFYEENPDFIQPASRKNEMINNFIKPGLQDLAVSRTSFTWGVKVPSNPKHVVYVWI 239

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DALTNY+T  GY    D    K+WPAD+H++GKDILRFH IYWP  L++ +LPLPKKVF 
Sbjct: 240 DALTNYITALGYGTADDTLYQKYWPADVHLVGKDILRFHTIYWPIMLMALDLPLPKKVFG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ L K  K+SKS GNV+DP  +I+  G+DA+RY+L+RE+  G DG +  +   +RVN 
Sbjct: 300 HGWFLTKDGKMSKSKGNVVDPAPLIDHFGLDAIRYYLLREVPFGADGVFTPEAFVERVNY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K ++G IP    + +  DE +L +    + ++ + M+     
Sbjct: 360 DLANDLGNLLNRTVAMINKYFNGEIPAYVKSASPFDEDLLDLVQATITKVEDAMEEMEFS 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            ALA +  LVS  ++Y D  +PW L K   +R    +V+Y   E +R +++L++ F+ + 
Sbjct: 420 IALAAIWQLVSRTNKYIDETQPWMLAKEEDNRELLGSVMYHLAESLRIISVLIRPFMTRT 479

Query: 470 ANKIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
             KI+  L + +    ++S+    +L  G  + K  +P+FPR 
Sbjct: 480 PAKIWAQLGIDESLAGWESIRVFGQLPAGTKVSK-GEPVFPRL 521


>gi|92117538|ref|YP_577267.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800432|gb|ABE62807.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 659

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 267/508 (52%), Positives = 359/508 (70%), Gaps = 4/508 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI YPN  PHIGHAYE I  DVLARF RLDG DV F TGTDEHGQK+ + AQ  
Sbjct: 149 TFYITTAIVYPNGAPHIGHAYEAIATDVLARFQRLDGKDVFFLTGTDEHGQKMVQTAQKE 208

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++      +N+   R + + L+IS++ FIRT+E  HH + + +WK+++  GDIY   Y+
Sbjct: 209 NISALELATRNAELLRKLDETLNISFNRFIRTSEPAHHHSVQEIWKRMAANGDIYLSSYA 268

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQD+LL+ YES P+
Sbjct: 269 GWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYQDRLLALYESQPD 328

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFVK GLKDLS+SR TFDWG+K+PDDP+++MYVW+DALTNY+T  G+ 
Sbjct: 329 FIGPDSRRNEVISFVKGGLKDLSISRTTFDWGVKVPDDPEHVMYVWVDALTNYITGVGFP 388

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  D    ++WPADLH+IGKDI+RFHA+YWPAFL+SA +PL K+V++HGF+ ++GEK+SK
Sbjct: 389 DEND-KDWRYWPADLHIIGKDIIRFHAVYWPAFLMSAGIPLQKRVYAHGFLFNRGEKMSK 447

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  +  + GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN  GNL  RS
Sbjct: 448 SVGNVVDPFNLAAQYGVDQVRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQRS 507

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SMI K +DG +P PG F+++D++IL+    ++   RE M  Q IH+AL  V ++V+E +
Sbjct: 508 LSMIAKQHDGALPEPGDFSDNDKAILAQADGMIAVAREAMNTQQIHQALNAVWAVVAEAN 567

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           RYF  + PW L KT+P R  TVLYV  EV+RQ+AIL Q  +P     + D+L +    R 
Sbjct: 568 RYFAGEAPWVLAKTDPARQKTVLYVAAEVVRQIAILAQPAMPASCATMLDLLGIPASERN 627

Query: 486 FQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           F  L    R+KPG  L     P+FPR++
Sbjct: 628 FAMLGGHVRIKPGTTLPPPV-PVFPRYV 654


>gi|256044655|ref|ZP_05447559.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564001|ref|ZP_05834487.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991079|ref|ZP_06103636.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|25009373|sp|Q8YH17|SYM_BRUME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|260154017|gb|EEW89109.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001863|gb|EEZ14438.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 515

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 278/509 (54%), Positives = 376/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   +++W+ +   GDIYKG
Sbjct: 62  RKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL    +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAAPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+FPR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVFPRYV 509


>gi|261405922|ref|YP_003242163.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282385|gb|ACX64356.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 662

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 220/517 (42%), Positives = 329/517 (63%), Gaps = 12/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MADKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +D+   LDIS +DFIRTTEKRH    + +++++  + DIY
Sbjct: 61  KAAEAGKTPQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQDVFERLLKQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ + ++  G           PV+ ++EE YFFR+S Y D+LL YY
Sbjct: 121 KGEYEGWYCTPCESFFLERQLVNGN----CPDCGRPVELVKEESYFFRMSKYVDRLLQYY 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E +P+FI P+ R+NE+I+   K GL+DL++SR T++WG+K+  DP++++YVWIDAL NY+
Sbjct: 177 EENPDFIQPVSRKNEMINNFIKPGLEDLAVSRTTYEWGVKVKSDPKHVIYVWIDALLNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY         K+WPAD+H++ K+I+RFH IYWP  L++ ++PLPKKVF+HG++L K
Sbjct: 237 TALGYGTEDTSLYDKYWPADVHLMSKEIVRFHTIYWPIILMALDVPLPKKVFAHGWLLMK 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +RVN+DLAN +G
Sbjct: 297 DGKMSKSKGNVVDPVTMIDRYGLDALRYYLLREVPFGADGTFTPESFVERVNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+V+M+ K +DG +P   A  T  D +I      V  ++   M+N     AL  + 
Sbjct: 357 NLLNRTVAMVDKYFDGEVPAFSAGVTPFDAAIEEAAKSVYDKVETAMENMEFSVALTAIS 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             VS  ++Y D  +PW L K    R   ++V+   VE +R  +ILLQ F+ +   K+++ 
Sbjct: 417 QFVSRSNKYIDETQPWTLAKDESKRHELASVMSHLVEALRIASILLQPFLTRTPKKMWEQ 476

Query: 477 LFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           L +A+ E   ++S  Q   +  G  L K  +PIFPR 
Sbjct: 477 LGLAEGELTTWESGRQLGAIPAGTKLQK-GEPIFPRL 512


>gi|253575851|ref|ZP_04853186.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844894|gb|EES72907.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 673

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 218/524 (41%), Positives = 323/524 (61%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI++ I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI +
Sbjct: 1   MSNKPTFYITSPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T + FVD      + + + LDISYDDFIRTTE RH      ++ ++  +GDIY
Sbjct: 61  KAKEKGQTPQQFVDGIVAGIKQLWEKLDISYDDFIRTTEPRHKQVVEAIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           KG Y GWYS+ DE YY + ++            G       + V+ ++EE YFFR+S Y 
Sbjct: 121 KGEYEGWYSIPDETYYTESQLVDVIRNEKGEVIGGKSPESGHAVELVKEECYFFRMSKYV 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P+FI P  R+NE+I+   K GL+DL++SR TFDWG+K+  DP++++YVWI
Sbjct: 181 DRLLKFYEENPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  +      ++WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF 
Sbjct: 241 DALSNYITALGYGTDNQELFERYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L KG K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +RVN+
Sbjct: 301 HGWLLMKGGKMSKSKGNVVDPNVLIDRYGLDATRYYLLREVPFGSDGSFTPESFVQRVNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+M+ K + G +P      T  D  +       ++++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMMEKYFGGEVPAYEPNATAFDAELEQAALDTVRKVEEVMENMGFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  + + +S  ++Y D  +PW L K    +   ++V+    E +R  +ILLQ F+ + 
Sbjct: 421 VALTHIGAFISRTNKYIDETQPWVLAKDEAKKGELASVMAHLAESLRIASILLQPFLTQA 480

Query: 470 ANKIFDILFVAD-ENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
             KI+  L +A  E   ++S      +  G  L K  +PIFPR 
Sbjct: 481 PAKIWAQLGIAPGELTTWESAKTFGLIPAGTKLVK-GEPIFPRL 523


>gi|146340771|ref|YP_001205819.1| methionyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193577|emb|CAL77594.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Bradyrhizobium sp. ORS278]
          Length = 705

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 266/512 (51%), Positives = 363/512 (70%), Gaps = 4/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +     Y++TAIAYPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG K+ + 
Sbjct: 191 ENANTFYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGTDEHGLKMVQT 250

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQN G+T      +N+  FR+M + L++S+D FIRTTE  HH + + +W ++ + GDIY 
Sbjct: 251 AQNEGLTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYA 310

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             YSGWYS+RDEAYY ++E   G D      Q  PV+W+EE+ YFFRLSAYQDKLL+ YE
Sbjct: 311 DTYSGWYSVRDEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDKLLALYE 370

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           + P+FI P  RRNE+ SFV+ GLKDLS+SR TFDWG+++P D +++MYVW+DALTNY+T 
Sbjct: 371 NQPDFIGPDARRNEITSFVRGGLKDLSISRTTFDWGVRVPHDDEHVMYVWVDALTNYITG 430

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D  D +  KFWPAD+HVIGKDI+RFHA+YWPAFL+SA +P+PK+V++HGF+ ++GE
Sbjct: 431 VGFPDEND-ANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAHGFLFNRGE 489

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP  + ++ GVD LRYF +RE+  G+DG Y+ + +  R+NADLAN +GNL
Sbjct: 490 KMSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNL 549

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SMI K + G++P PG F+ +D++IL+    ++   R+ M  Q IH+ L  V S+V
Sbjct: 550 AQRSLSMITKQFGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQWLNAVWSVV 609

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +E +RYF  + PW L KT+P R  TVLYVT EVIRQ+AIL Q  +P  + K+ D L + +
Sbjct: 610 AEANRYFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPAASAKLLDSLGIPE 669

Query: 482 ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           + R F  L    R+ PG  L      +FPR++
Sbjct: 670 DERSFARLGGEVRIAPGTQLPAP-QAVFPRYI 700


>gi|192291492|ref|YP_001992097.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192285241|gb|ACF01622.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 514

 Score =  493 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 277/511 (54%), Positives = 369/511 (72%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T      +N+  FR+M D L +SYD FIRT+E++HH + + +WK++ DKGDIY
Sbjct: 61  TAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGEDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVKSGLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY++
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIS 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D +   +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDEND-ANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++M+ K  +G +P  GAF+E+D +IL++   ++ + R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMVAKQCEGKVPEHGAFSENDSAILAMADGMIAQARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ DIL +A
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +L  R+ PG  L     PIFPR++
Sbjct: 480 EGQRDFAALATRIVPGTPLPAPA-PIFPRYV 509


>gi|39935844|ref|NP_948120.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|39649698|emb|CAE28219.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 514

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 277/511 (54%), Positives = 368/511 (72%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T      +N+  FR+M D L +SYD FIRT+E++HH + + +WK++ DKGDIY
Sbjct: 61  TAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAYQDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEKSYFFKLSAYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVKSGLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY++
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIS 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D     +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDEND-KNWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++M+ K  +G +P  GAF+E+D +IL++   ++ + R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMVAKQCEGKVPEHGAFSETDSAILAMADAMITQARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ DIL +A
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIAILAQPAIPTAAAKLLDILGIA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +L  R+ PG  L     PIFPR++
Sbjct: 480 EGQRDFAALATRIVPGTPLPAPA-PIFPRYV 509


>gi|196250752|ref|ZP_03149439.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209702|gb|EDY04474.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 650

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 224/514 (43%), Positives = 335/514 (65%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D LAR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDTLARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++E+ YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEQSYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K +DG+IP   G  T  DE ++     V+++  E M+      ALA V  L
Sbjct: 358 LNRTVAMIKKYFDGVIPPYRGPKTPFDEELVQTAREVVRQYEEAMERMEFSVALASVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K     +  ++V+    E +R  A+LLQ F+ +   +IF  L 
Sbjct: 418 IGRTNKYIDETQPWVLAKDESKREELASVMTHLAESLRHTAVLLQPFLTRTPERIFAQLG 477

Query: 479 VADEN-RCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           +AD + + + SL +  L P     +  +P+FPR 
Sbjct: 478 IADRSLKEWDSLYEFGLIPEGTNVQKGEPLFPRL 511


>gi|229083353|ref|ZP_04215709.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699960|gb|EEL52589.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 660

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EEKKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHAVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP      TE D+++++    +L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFDGEIPAFKENVTEFDQTLVAFAQDILKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + D+ ++ +    E++RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASAMAHLAEMLRQTGIMLMPFLTATPS 482

Query: 472 KIFDILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           KIF  L + DE    + SL     +  G  + K   PIFPR 
Sbjct: 483 KIFTQLGLTDEAYHSWDSLSTIGCIPAGTKVVK-GQPIFPRL 523


>gi|138893709|ref|YP_001124162.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265222|gb|ABO65417.1| Methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 650

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 224/514 (43%), Positives = 335/514 (65%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D LAR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDTLARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++E+ YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEQSYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIIRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K +DG+IP   G  T  DE ++     V+++  E M+      ALA V  L
Sbjct: 358 LNRTVAMIKKYFDGVIPPYRGPKTPFDEELVQTAREVVRQYEEAMERMEFSVALASVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K     +  ++V+    E +R  A+LLQ F+ +   +IF  L 
Sbjct: 418 IGRTNKYIDETQPWVLAKDESKREELASVMTHLAESLRHTAVLLQPFLTRTPERIFAQLG 477

Query: 479 VADEN-RCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           +AD + + + SL +  L P     +  +P+FPR 
Sbjct: 478 IADRSLKEWDSLYEFGLIPEGTNVQKGEPLFPRL 511


>gi|74420524|gb|ABA04723.1| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 692

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 268/509 (52%), Positives = 363/509 (71%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ 
Sbjct: 181 DTFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQR 240

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++      +N+   R + + LDIS+D FIRT+E  HH + + +WK+++  GDIY   Y
Sbjct: 241 ENISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLSNY 300

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAY+D+LL+ YES P
Sbjct: 301 SGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEP 360

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T  G+
Sbjct: 361 DFIGPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGF 420

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  + S  +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+S
Sbjct: 421 PDEDE-SNWRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMS 479

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP  +  + GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN  GNL  R
Sbjct: 480 KSVGNVVDPFSLAAQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQR 539

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K + G++P PG F+++D++IL+    ++   RE M  Q IH+AL  + S+V+E 
Sbjct: 540 SLSMIAKQHGGVLPEPGDFSDADKAILAQADGMIAIAREAMNTQQIHQALNAIWSVVAEA 599

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P    K+ DIL +  + R
Sbjct: 600 NRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPAACAKLLDILGIPADER 659

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D R++PG  L     P+FPR++
Sbjct: 660 NFAMLGGDIRIRPGSALPAPV-PVFPRYV 687


>gi|328543900|ref|YP_004304009.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
 gi|326413644|gb|ADZ70707.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 518

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 285/513 (55%), Positives = 366/513 (71%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K YI+TAI+YPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTARPKYYITTAISYPNGAPHIGHAYEAIATDAMARFQRLDGKDVYFLTGTDEHGQKMLQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +   D+NS  FRDM   L  + DDFIRT+E RHH + + +W++++  GDIY
Sbjct: 61  TAKKEGISVRELADRNSARFRDMVAALGCTNDDFIRTSEPRHHRSSQEIWRRMAANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  YSGWYS+RDEAYY + E    ADG  Y  Q +PV+W+EEE YFFRLSAYQD+LL++Y
Sbjct: 121 KDSYSGWYSVRDEAYYQEGETELRADGVRYGPQGSPVEWVEEESYFFRLSAYQDRLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNE++SFVK GLKDLS+SR TFDWGI +P D  ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEIVSFVKRGLKDLSVSRTTFDWGIPVPGDEAHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D     +WPAD H+IGKDI+RFHA+YWPAFL+SA +PLPK+VF+HGF+ ++G
Sbjct: 241 GVGFPDEDDPL-WSYWPADAHIIGKDIIRFHAVYWPAFLMSAGIPLPKRVFAHGFLFNRG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP  +IE  G+D  RYF +RE+  G+DG Y  + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNVIDPFNLIEHYGLDQTRYFFLREVPFGQDGNYSHEAIVGRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG++P PGA T  DE+IL     +L   R     Q IH+ALA V + 
Sbjct: 360 LAQRSLSMIAKNCDGVLPAPGALTPEDEAILGQADVMLDTCRAAFARQEIHQALACVWAC 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF AQ+PW L+K++P R  TVLYVT EVIRQ+AIL Q   P  A  + D L VA
Sbjct: 420 VAEANRYFAAQEPWALRKSDPARMGTVLYVTAEVIRQIAILAQPVTPNAAALLLDNLGVA 479

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
            +NR F  L    RL  G  + K   P FPR++
Sbjct: 480 ADNRVFARLGAAGRLAAGVAIPKPV-PAFPRYV 511


>gi|297582380|ref|YP_003698160.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140837|gb|ADH97594.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 662

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 222/521 (42%), Positives = 333/521 (63%), Gaps = 13/521 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   YI+T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A
Sbjct: 4   EKNTFYITTPIYYPSAKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G + + FVD  S + +++   LDISYDDFIRTTE RH    + ++++  ++GDIY  
Sbjct: 64  EENGKSPQQFVDDISSDIQELWKKLDISYDDFIRTTEDRHKQVVQHIFERFLEQGDIYLD 123

Query: 123 CYSGWYSLRDEAYYND-------DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y GWYS+ DE +Y +        +      G       +PV+ + E+ YFF++S Y D+
Sbjct: 124 EYEGWYSVSDETFYTELQLEDKEYDDNGNVTGGKSPDSGHPVEKVREKSYFFKMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL+YYE +PEFI P  R+NE+I+   K GL+DL++SR +F WG+ +  DP++++YVWIDA
Sbjct: 184 LLAYYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFRWGVPVKSDPEHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +G     WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF HG
Sbjct: 244 LSNYITALGYSTDENGLFQSHWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP+ +IE  G+DALRY+L+RE+  G DG +  +G  +RVN DL
Sbjct: 304 WLLMKDGKMSKSKGNVVDPVPLIERYGLDALRYYLLREVPFGSDGVFTPEGFVERVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++RSV+MI K +DG +P      T  DE++  +    + ++ E+M+N     A
Sbjct: 364 ANDLGNLLNRSVAMINKYFDGEVPAYVKDATSYDETLTDLVEATVNKVEESMENMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  L+S  ++Y D  +PW L K     ++  +VL+  VE +RQ++I+LQ F+ +   
Sbjct: 424 LTAIGQLISRTNKYIDETQPWILAKDETAREQLGSVLHHLVESLRQVSIMLQPFMTETPK 483

Query: 472 KIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           KI + L + D    + +L    ++  G  +    +PIFPR 
Sbjct: 484 KIQEQLSIPDSLMGWDTLVTFGQIPAGKKVVAKGEPIFPRL 524


>gi|225181535|ref|ZP_03734977.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167783|gb|EEG76592.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 652

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 224/514 (43%), Positives = 328/514 (63%), Gaps = 11/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+T I YP+ + HIGH+Y  + AD +ARF RL G    F TGTDEHGQKI + A
Sbjct: 2   QKKSFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGHQAYFLTGTDEHGQKIERRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG   + FVD+     + +  VLDISYDDFIRTTE+RH D+ + ++ K  ++GDIYK 
Sbjct: 62  QEAGKEPQEFVDEIVDWIKKLWTVLDISYDDFIRTTEQRHKDSVQKIFTKFYEQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    EA++ + +V +G           PV+ + EE YFF++S Y D+L+ + E+
Sbjct: 122 KYEGWYCTPCEAFWTERQVEEGN----CPDCKRPVELVAEESYFFKMSKYADRLIEHIEN 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R+NE+I+   K GL+DL +SR TF WGI +P DP +++YVW+DAL+NY+T 
Sbjct: 178 NPEFIQPASRKNEMINNFLKPGLEDLCVSRTTFKWGIPVPFDPDHVIYVWLDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL   D     FWPAD+ +IGK+I+RFH IYWP FL++  L LPK+VF HG++L +  
Sbjct: 238 LGYLSEDDSKMKAFWPADVQLIGKEIVRFHTIYWPIFLMALGLELPKQVFGHGWLLLEEG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP  ++E  G DA+RYFL+REI  G DG + ++ L +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVIDPEVLVERYGSDAIRYFLLREIPFGADGHFSEEALIQRLNFDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+++M+ K Y G +PTP      DE + S+   + Q++ E M   L   AL+++   +
Sbjct: 358 LNRTLAMLNKYYQGKVPTPSLDEAIDEELKSMALDLPQKMTERMDQLLFSNALSELWKFI 417

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  ++Y D   PW L K  N  R +TV+Y  +E IR +++LL  F+P+   +I+  L +A
Sbjct: 418 ARANKYIDETAPWTLAKEGNQQRLATVMYNLLESIRIVSVLLLPFMPRTPERIWQQLGIA 477

Query: 481 DENR--CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            E +   + S+ +   L  G    K  + +FPR 
Sbjct: 478 HEGKIHTWDSIQEFGALPAGAQ-TKAAEVLFPRL 510


>gi|148255487|ref|YP_001240072.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407660|gb|ABQ36166.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 722

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 267/511 (52%), Positives = 360/511 (70%), Gaps = 4/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    Y++TAIAYPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A
Sbjct: 209 DNNTFYVTTAIAYPNGNPHIGHAYEAIATDAIARFARLDGKDVFFLTGTDEHGLKMVQTA 268

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           QN G+T      +N+  FRDM + L++S+D FIRTTE  HH + + +W ++ + GDIY  
Sbjct: 269 QNEGLTPGELATRNAGRFRDMDERLNVSFDRFIRTTEPAHHKSVQAIWNRMLENGDIYAD 328

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFFRLSAYQD+LL+ YES
Sbjct: 329 TYAGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDRLLALYES 388

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+FI P  RRNE+ISFVK GLKDLS+SR TFDWG+++P D +++MYVW+DALTNY+T  
Sbjct: 389 QPDFIGPDARRNEIISFVKGGLKDLSISRTTFDWGVRVPHDDEHVMYVWVDALTNYITGV 448

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D  D +  K+WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+PK+V++HGF+ ++GEK
Sbjct: 449 GFPDEND-ANWKYWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAHGFLFNRGEK 507

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  + ++ GVD LRYF +RE+  G+DG Y+ + +  R+NADLAN +GNL 
Sbjct: 508 MSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLA 567

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K   G +P PG F+ +D +IL+    ++   R+ M  Q IH+ L  V S+V+
Sbjct: 568 QRSLSMIAKQLGGQLPEPGEFSANDRAILAEADAMIGAARKAMATQQIHQWLNAVWSVVA 627

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  + PW L KT+P R  TVLYVT EVIRQ+AIL Q  +P  + K+ D L + ++
Sbjct: 628 EANRYFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPTASAKLLDSLGIPED 687

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            R F  L    R+  G  L      +FPR++
Sbjct: 688 ERNFARLGGEIRIAAGTQLPAP-QAVFPRYI 717


>gi|78044237|ref|YP_361414.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996352|gb|ABB15251.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 653

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 225/510 (44%), Positives = 330/510 (64%), Gaps = 9/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+   HIGHAY  + AD +ARF R+ G DV F TG+DEHGQKI + A++
Sbjct: 3   KSFYITTPIYYPSDNLHIGHAYTTVAADTMARFKRMTGYDVWFLTGSDEHGQKIERKAKS 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K +VD    +F+ +  +LDISYDDFIRTTE+RH    + +++K+ D+GDIYK  Y
Sbjct: 63  QGLSPKEYVDPIVDSFKHLWKLLDISYDDFIRTTEERHKKVVQAIFQKLYDQGDIYKSAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    EA++ + ++  G           PV+W  EE YFF++S Y D+LL + E +P
Sbjct: 123 EGWYCTPCEAFWTEGKLIDGK----CPDCGRPVEWTREESYFFKMSKYADRLLKHIEENP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI+P  RRNE+I+F+K GL+DL +SR TF+WGI +P D ++++YVW+DALTNY++  GY
Sbjct: 179 EFIVPESRRNEMINFIKQGLEDLCVSRTTFNWGIPVPFDKKHVVYVWVDALTNYISALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + D    K+WPAD+H++GKDI+RFH + WP  LL+  + LPKKV  HG+ + +G K+S
Sbjct: 239 GTDDDHLFQKYWPADVHLVGKDIVRFHTVIWPIILLALGIELPKKVVGHGWFVLEGGKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP++++E+ GVDA+RYFLVRE+  G D  Y ++ L  R+N DLAN +GNL++R
Sbjct: 299 KSKGNVVDPVKLVEKYGVDAVRYFLVREMPLGLDAVYSEEALINRINVDLANDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SM+ K   G IP P  + E D  ++ +   +  E  + M    +  ALA +  LV+ +
Sbjct: 359 TLSMLEKFLGGEIPLPSEYEEIDREVIELALALPAETEKLMDKFDLAGALANIWRLVTRL 418

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++Y D   PW L K    +R  TVLYV +E  R + +LL+  +P    K+   L V DE+
Sbjct: 419 NKYIDEVAPWSLNKEGKIERLKTVLYVVLEGYRFITVLLKPVMPNFPAKVSAQLGVNDES 478

Query: 484 -RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
              ++SL    RL  G  + K  +P+FPR 
Sbjct: 479 LFTWESLSNWGRLPAGVKI-KKGEPLFPRL 507


>gi|228989246|ref|ZP_04149239.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228770456|gb|EEM19027.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 660

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHAVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWGI++P +P++++YVW+DA
Sbjct: 183 LLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L++I E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQGTLKKIEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + D+ ++V+    E++RQ+AI+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMAIMLMPFLTATPS 482

Query: 472 KIFDILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           KIF  L + DE  + + SL     +     + K   PIFPR 
Sbjct: 483 KIFTQLGLTDEAYQSWDSLSTIGCIPASTKVVK-GQPIFPRL 523


>gi|118475810|ref|YP_892961.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118415035|gb|ABK83454.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 669

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 12  EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 71

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 72  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 131

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 132 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 191

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 192 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 251

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 252 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 311

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 312 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 371

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 372 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 431

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 432 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 491

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 492 KMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEK-GQPIFPRL 532


>gi|110633935|ref|YP_674143.1| methionyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284919|gb|ABG62978.1| methionyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 517

 Score =  490 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 275/511 (53%), Positives = 363/511 (71%), Gaps = 4/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE  YI+TAI+YPN +PHIGHAYE+I  D LARF R DG DV+F TGTDEHG K+ + A
Sbjct: 2   TRETFYITTAISYPNGRPHIGHAYELIATDALARFQRCDGKDVMFLTGTDEHGIKMLQTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T     D+N+  F+ MA +L+ S DDFIRTTE+RH    + +WK ++D+GDIY G
Sbjct: 62  RKEGITAGELADRNAPEFQRMAKLLNASNDDFIRTTEERHRTASQAIWKAMADRGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWYS+RDEAYY +DE   G DG  Y  Q  PV+W+EEE YFFRLSAYQ++LL  YE 
Sbjct: 122 GYSGWYSVRDEAYYGEDETRVGEDGVRYGPQGTPVEWVEEESYFFRLSAYQERLLKLYEE 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE++SFV+SGL+DLS+SR TFDWG+ +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPDFIGPAERRNEIVSFVRSGLRDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D     + ++WPAD+H+IGKDI+RFHAIYWPAFL+SA + LPK+VF HGF+ ++GEK
Sbjct: 242 GYPDQDA-ERWRYWPADVHIIGKDIIRFHAIYWPAFLMSAGIALPKRVFGHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP  +IE  G+D +RYF +RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFTMIEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ DG +P  G  + +D +IL      L   R  M  Q IH ALA +  +V+
Sbjct: 361 QRSLSMIAKNCDGKVPARGELSAADRAILDQAEAALATARGAMGRQAIHAALAAIFDVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF AQ+PW L+KT+P R  TVLY T E +R++AIL Q F+P  A K+ D+L V  +
Sbjct: 421 EANRYFAAQEPWALRKTDPARMETVLYTTAETLRRIAILCQPFIPSSAEKLLDLLSVPQD 480

Query: 483 NRCFQSLDQR--LKPGFMLHKTFDPIFPRFL 511
            R F  + +   L PG  L     P+FPR++
Sbjct: 481 RRGFADVGETAMLAPGTPLPAP-QPVFPRYV 510


>gi|322382808|ref|ZP_08056652.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153277|gb|EFX45723.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 659

 Score =  490 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 222/516 (43%), Positives = 336/516 (65%), Gaps = 13/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++  Y++T I YP+ + HIGHAY  +  D LAR+ RL G DV++ TGTDEHGQKI + 
Sbjct: 3   EAKKTFYLTTPIYYPSDKLHIGHAYTTVAGDALARYKRLRGYDVMYLTGTDEHGQKIERK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T + FVD      +++   +DISYDDFIRTTE RH ++  +++ ++ ++GDIY 
Sbjct: 63  AKEKGMTPQAFVDNIVAGIKELWGKMDISYDDFIRTTEDRHKESVSVIFARLMEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ ++++  G           PV+ M+EE YFFR+S Y D+LL YYE
Sbjct: 123 GEYEGWYCTSCESFFPENKLADGK----CPDCGGPVEKMKEESYFFRMSKYADRLLQYYE 178

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +P+FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P+DP++++YVWIDAL+NY++
Sbjct: 179 ENPDFIQPESRKNEMINNFIKPGLEDLAVSRATFDWGVKVPNDPKHVIYVWIDALSNYIS 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY         K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K 
Sbjct: 239 ALGYGTKDSSKFDKYWPADVHLVGKEIIRFHTIYWPIMLMAMGLPLPKKVFGHGWLLMKD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ +I+  G+DALRYFL+RE+  G DG +  +   +R+N DLAN +GN
Sbjct: 299 GKMSKSKGNVVDPVTLIDRYGLDALRYFLLREVPFGADGQFTPESFVERINHDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L++R+V M++K +DG   +  PGA TE D  +L      + +  E M+N     AL+ + 
Sbjct: 359 LLNRTVVMMMKYFDGKLQVYVPGA-TEYDADLLKTMEGSISKYEEAMENLEFSVALSALW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +L+   ++Y D  +PW L K    +   +V+YV  E+ R ++ILLQ FV +   K++  L
Sbjct: 418 TLIGRANKYIDETQPWVLAKEGKTETLGSVMYVLAEIQRIISILLQPFVTQTPAKMWSSL 477

Query: 478 FVAD-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            + + E   + S+    +L  G  + K  DP+FPR 
Sbjct: 478 GIREGEMTTWDSIYTFGKLPAGTQV-KKTDPMFPRL 512


>gi|121534360|ref|ZP_01666184.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307130|gb|EAX48048.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 640

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 229/514 (44%), Positives = 333/514 (64%), Gaps = 12/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+  YI+T I YP+ + HIGHAY   IAD +AR+ RL G DV F TG+DEHGQKI + A
Sbjct: 2   SRKSFYITTPIYYPSDRLHIGHAYCTTIADAIARYKRLAGYDVFFLTGSDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT   +VD+   +F+ + + L+IS DDFIRTTE RH +  + +++KI D+GDIYK 
Sbjct: 62  KEHGVTPIEYVDKIVASFKHLWEKLNISNDDFIRTTETRHKEVVQSIFQKIYDQGDIYKA 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E ++ + ++  G           PV+ ++EE YFFRLS YQD+LL Y E 
Sbjct: 122 TYEGQYCTPCETFWLERQLVDGK----CPDCGRPVELVQEESYFFRLSKYQDRLLQYIEE 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I+F+KSGL+DL +SR TFDWGI +P D ++++YVW DAL NY+T  
Sbjct: 178 NPDFIQPASRRNEMINFIKSGLEDLCVSRTTFDWGIPVPFDTKHVVYVWFDALVNYITAA 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GYL + +    K+WPAD+H++GK+I+RFH I WP  L++  + LPK V+ HG+++ +G+K
Sbjct: 238 GYLHDRE-KFNKYWPADVHLVGKEIVRFHTIIWPIILMALGIELPKMVYGHGWLVVEGDK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP+ +I+E G DA+RYFL++EI  G DG + ++ L  R+NADLAN +GNL+
Sbjct: 297 MSKSKGNVIDPLALIDEFGADAIRYFLLKEITLGLDGNFSREALISRINADLANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R++SMI +   G+I  PGA    D  ++ +         ++M+N  I+ A+ +V  L+ 
Sbjct: 357 HRTLSMIGRFNGGVIEGPGANEPIDLELVELAQNTAAAYEKHMENMEINAAIKEVWGLIG 416

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K  T   R +TVLY   EV+R ++IL+  F+P+ A KI+  L + 
Sbjct: 417 RANKYIDETAPWALAKDATKKSRLNTVLYNLAEVLRIVSILISPFMPQAAPKIWSQLGIE 476

Query: 481 DENRCFQSLD----QRLKPGFMLHKTFDPIFPRF 510
           D     +  D     +LK G  ++K  +PIFPR 
Sbjct: 477 DNFGNMRLDDAQRWGQLKAGTRVNKP-EPIFPRI 509


>gi|254689226|ref|ZP_05152480.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256257476|ref|ZP_05463012.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754731|ref|ZP_05867079.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883752|ref|ZP_05895366.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248320|ref|ZP_06932038.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674839|gb|EEX61660.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873280|gb|EEX80349.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175489|gb|EFH34836.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 515

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 277/509 (54%), Positives = 374/509 (73%), Gaps = 1/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK YI+TAIAYPN +PHIGHAYE+I  D +ARF RL+G+DV F TGTDEHG K+ ++A
Sbjct: 2   SREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+N+  FR MA+VL+ S DD+IRT+E+RH+   + +W+ +   GDIYKG
Sbjct: 62  RKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    ADG  Y     PV+W+EEE YFFRLSAYQDKLL  YE+
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADGVRYGPPGTPVEWVEEESYFFRLSAYQDKLLDLYEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI+P ERRNE++SFVKSGLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T  
Sbjct: 182 NPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  +  +WPA+ H+IGKDI RFHA+YWPAFL+SA LPLPK+VF+HGF+ ++GEK
Sbjct: 242 GYPDTTD-ERWAYWPANAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP E++E  G+D LRYFL+RE+  G+DG Y  + +  R NADLAN +GNL 
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +G +P PGAF+E+D++IL      L+  R+ M +Q +H AL  + ++V+
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  Q+PW L+KT+P R  TVLYVT EV+R++ I++Q F+P+ A K+ DIL V  +
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPAD 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F  +      G        P+ PR++
Sbjct: 481 KRQFADVLASPLAGGTDLPAPQPVLPRYV 509


>gi|226365134|ref|YP_002782917.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226243624|dbj|BAH53972.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 519

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 259/510 (50%), Positives = 354/510 (69%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   Y++TAIAYPN  PHIGHAYE I +D LARF RLDG DV F TGTDEHG K+ + A
Sbjct: 9   SRPPFYLTTAIAYPNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTA 68

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F  M   L+IS+D FIRTT+  H +  + +W+++ + GDIY  
Sbjct: 69  AKEGIDVRELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWQRMLEAGDIYLD 128

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  YFF+LS YQDKLL+ Y+
Sbjct: 129 TYSGWYSVRDEAFYTEAETTLQEDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLALYD 188

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE++SFVK GLKDLS+SR TFDWG+ +P  P+++MYVW+DALTNYLT 
Sbjct: 189 ENPDFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVPVPGHPEHVMYVWVDALTNYLTG 248

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D       KFWPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGE
Sbjct: 249 AGYPDTDSEQFGKFWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGE 308

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+NADLAN +GNL
Sbjct: 309 KMSKSVGNVVDPVAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRINADLANELGNL 368

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ D  +PTPGA T+ D ++L+    +L+ +R     Q +H AL  + S++
Sbjct: 369 AQRSLSMVAKNCDAQVPTPGALTDDDTAMLAQADALLERVRAEYDVQALHLALEAIWSVL 428

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P+R +TVLYVT+EV+R + IL+Q  +P  A KI D+L    
Sbjct: 429 GETNRYFSKQEPWVLRKTDPERMATVLYVTLEVVRIVGILVQPVMPDAAEKILDLLGQKS 488

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + R F  L  R+  G  L      +FPR++
Sbjct: 489 DARQFSDLPARIVAGTPLPAP-SGVFPRYV 517


>gi|116671079|ref|YP_832012.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611188|gb|ABK03912.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 519

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 259/507 (51%), Positives = 341/507 (67%), Gaps = 3/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI YPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG KIA+ A   
Sbjct: 8   PFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVFFLTGTDEHGMKIAQTADKE 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K  VD+N+  ++     L ISYD FIRTT++ H+   + +WKK+   GDIY   Y 
Sbjct: 68  GITPKELVDRNAEIYKAAHAALGISYDRFIRTTDEDHYAASQAIWKKMEANGDIYLSKYE 127

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           GWYS+RDEAYY +DE     DG  Y+ +    + W  EE YFFRLSAYQDKLL+ YE+HP
Sbjct: 128 GWYSVRDEAYYVEDETVVKEDGLRYSRETDTELTWTAEESYFFRLSAYQDKLLALYEAHP 187

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EF  P  R NEVISFVK GL+DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY
Sbjct: 188 EFGAPQSRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGVGY 247

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D    S  K+WPAD+HVIGKDI RFHAIYWPAFL+SA L LPK++  HGF+ + G K+S
Sbjct: 248 PDTESDSFKKYWPADVHVIGKDISRFHAIYWPAFLMSAGLELPKRIMIHGFLNNNGVKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+ P + + + G+D +R+F +RE+  G DG Y  + +  R+N+DLAN  GNL  R
Sbjct: 308 KSLGNVVAPSDFVAQYGLDQVRFFFLREVPFGADGSYSHEAIVGRMNSDLANNFGNLAQR 367

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+ +G +P PGAFT  D ++L   + +L+  R   + Q   RAL  +  ++ + 
Sbjct: 368 SLSMVAKNCEGRVPVPGAFTAEDSALLEQANGLLEAARAAFEKQEFSRALEAIWGVLGDT 427

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
           + YF  Q PW L+KT+ +R +TVLYVT+EV+R +AIL+Q  +PK +  + D L   D E 
Sbjct: 428 NAYFAEQAPWVLRKTDVERMNTVLYVTLEVLRIVAILVQPVMPKASAALLDTLGQPDGEA 487

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F ++   L PG  L     PIFP++
Sbjct: 488 RRFAAIATPLVPGTELPAP-SPIFPKY 513


>gi|56418566|ref|YP_145884.1| methionyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|56378408|dbj|BAD74316.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 650

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/514 (43%), Positives = 332/514 (64%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIILMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IP   G  T  D+ ++     V+++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPPYRGPKTPFDQELVQTAREVVRQYEEAMEGMEFSVALAAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     D  + V+    E +R  A+LLQ F+ +   ++F  L 
Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHTAVLLQPFLTRTPERMFAQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           + D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511


>gi|218235634|ref|YP_002364888.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218163591|gb|ACK63583.1| methionine--tRNA ligase [Bacillus cereus B4264]
          Length = 660

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|135148|sp|P23920|SYM_BACST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|39989|emb|CAA40999.1| methionine--tRNA ligase [Geobacillus stearothermophilus]
          Length = 649

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/514 (43%), Positives = 328/514 (63%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  GVT + +VD      +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  QEKGVTPQQYVDDIVAGIQELWRKLDISYDDFIRTTQERHKKIVEKIFARLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVMIIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K + G IP   G  T  D  +      V+++  E M+      AL+ V  L
Sbjct: 358 LHRTVAMIEKYFGGAIPPYRGPKTPFDRDLSETAREVVRQYEEAMERMEFSVALSAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K     +  ++V+    E +R  A+LLQ F+ +   +IF  L 
Sbjct: 418 IGRTNKYIDETQPWVLAKEESKREELASVMAHLAESLRYTAVLLQPFLTRTPERIFTQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           ++D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ISDRSLKEWDSLYDFGLIPEGTNVQKGEPLFPRL 511


>gi|209964481|ref|YP_002297396.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
 gi|209957947|gb|ACI98583.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
          Length = 520

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 256/512 (50%), Positives = 351/512 (68%), Gaps = 3/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R   Y++T I Y N  PHIGHAY  +  DV+ARF RLDG DV F TGTDEHGQK+ K
Sbjct: 1   MTGRTPYYLTTPIYYVNDAPHIGHAYTTVACDVMARFKRLDGFDVKFLTGTDEHGQKVQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AG+T K   D+NS NFR++A +L++S DDFIRTTE RH    + LW+++ + GD+Y
Sbjct: 61  SAELAGITPKQMADRNSENFRELARLLNVSNDDFIRTTEPRHVTAVQALWQRLQESGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G YSGWYS+RDEAY+ +DE+ +  DG+ +     PV+W+EE  YFFRLSA+Q++LL  Y
Sbjct: 121 LGSYSGWYSVRDEAYFGEDELVER-DGRRFAPTGAPVEWVEEPSYFFRLSAWQERLLELY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ES P+FILP  +R+EV+SFV+ GL+DLS+SR TFDWGI +P D +++MYVW+DALTNY+T
Sbjct: 180 ESRPDFILPAGKRSEVVSFVRGGLRDLSISRTTFDWGIPVPGDEKHVMYVWLDALTNYIT 239

Query: 241 TTGYLDNPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             GY +  +     +FWPADLH++GKDILRFHA+YWPAFL++A L  P++VF+HG+   +
Sbjct: 240 AIGYPETGEGTLYGRFWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPRRVFAHGWWTVE 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKSLGNV+ P E+I   G+D  RYFL+REI  G DG + +  + +R+N +LAN  G
Sbjct: 300 GEKMSKSLGNVVKPEELIGTYGLDQTRYFLMREIPFGNDGDFSRRAMVQRINGELANDYG 359

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R +SM+ +  +G +P P AF E D  +L     +L  +R  +  Q  H+AL  +  
Sbjct: 360 NLVQRVLSMVQRYCEGRLPEPAAFGEPDNRLLDAAKGLLPAVRAELDQQAFHKALDTIWQ 419

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V + +RY D Q PW L+KT+  R  TVLY   E IR++A+L Q F+P+ + +I D L V
Sbjct: 420 VVGDANRYVDEQAPWSLRKTDTVRLGTVLYTLAETIRRVALLTQPFMPETSARILDQLVV 479

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           A + R F   D  L  G  L     P FPR++
Sbjct: 480 AADARSFADFDTVLAAGVQLP-PPQPAFPRYV 510


>gi|261208239|ref|ZP_05922912.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565960|ref|ZP_06446399.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293573149|ref|ZP_06684086.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
 gi|294615978|ref|ZP_06695805.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617639|ref|ZP_06697267.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260077496|gb|EEW65214.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162244|gb|EFD10105.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591164|gb|EFF22846.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596103|gb|EFF27368.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291606787|gb|EFF36172.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 669

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 216/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+   K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K    +A   +V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDPETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|196041780|ref|ZP_03109070.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196027400|gb|EDX66017.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 660

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKIVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|69248667|ref|ZP_00604797.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Enterococcus faecium DO]
 gi|227552442|ref|ZP_03982491.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257880089|ref|ZP_05659742.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257885518|ref|ZP_05665171.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257888319|ref|ZP_05667972.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257891180|ref|ZP_05670833.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893993|ref|ZP_05673646.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257896791|ref|ZP_05676444.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|260560302|ref|ZP_05832478.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293378577|ref|ZP_06624740.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293557282|ref|ZP_06675829.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293563094|ref|ZP_06677560.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293567520|ref|ZP_06678865.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294623374|ref|ZP_06702233.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940236|ref|ZP_07847409.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314941705|ref|ZP_07848584.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947651|ref|ZP_07851060.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314950637|ref|ZP_07853717.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992496|ref|ZP_07857917.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996350|ref|ZP_07861403.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194356|gb|EAN08866.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Enterococcus faecium DO]
 gi|227178417|gb|EEI59389.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257814317|gb|EEV43075.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257821374|gb|EEV48504.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257824373|gb|EEV51305.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257827540|gb|EEV54166.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830372|gb|EEV56979.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257833356|gb|EEV59777.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|260073647|gb|EEW61973.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291589763|gb|EFF21566.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291597221|gb|EFF28413.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291600569|gb|EFF30874.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605008|gb|EFF34476.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|292642906|gb|EFF61053.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|313589493|gb|EFR68338.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592956|gb|EFR71801.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313597184|gb|EFR76029.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599477|gb|EFR78320.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640556|gb|EFS05136.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645892|gb|EFS10472.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 669

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 216/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+   K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K    +A   +V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|228956480|ref|ZP_04118277.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039943|ref|ZP_04189708.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229142844|ref|ZP_04271287.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148448|ref|ZP_04276705.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500870|ref|YP_003662570.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228634990|gb|EEK91562.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640607|gb|EEK96994.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228727402|gb|EEL78594.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803170|gb|EEM49991.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296321922|gb|ADH04850.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 660

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|154248247|ref|YP_001419205.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154162332|gb|ABS69548.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 550

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 272/513 (53%), Positives = 363/513 (70%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ +
Sbjct: 33  MSAKPPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AGVT +  + +N   F  M +  ++S DDFIRTT++RHH + + +W K++  GDIY
Sbjct: 93  TAQKAGVTPRELLARNVPRFEAMVEAFNLSIDDFIRTTQERHHASSQAIWAKMAANGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY +DE      G     Q  PV+W+EEE YFFRLSAYQD+LL+YY
Sbjct: 153 KSTYAGWYSVRDEAYYAEDETQLNEQGIRLGPQGTPVEWVEEESYFFRLSAYQDRLLAYY 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P FI+P  RRNEV+SFV  GL DLS+SR TFDWGI +P D ++IMYVW+DALTNY+T
Sbjct: 213 AENPGFIMPEARRNEVVSFVSGGLTDLSISRTTFDWGIPVPGDDKHIMYVWVDALTNYIT 272

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       +FWPA+LHVIGKDI+RFHA+YWPAFL SA L  PK+VF HGF+ ++G
Sbjct: 273 ALGYPDTEAELFKRFWPANLHVIGKDIIRFHAVYWPAFLWSAGLEAPKRVFGHGFLFNRG 332

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP ++    GVDA+RYF +RE++ G+DG Y  + +  R+NADLAN +GN
Sbjct: 333 EKMSKSVGNVIDPFDLAATYGVDAIRYFFLREVSFGQDGSYSHEAIVARMNADLANDLGN 392

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG++P PG  +  DE+IL++   +L++ RE M+ Q IH  LA V ++
Sbjct: 393 LAQRSLSMIAKNLDGVVPQPGPLSPEDEAILALADGMLEKSREAMEGQAIHHYLAAVWNV 452

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF AQ PW L+KT+P R +TVL+VT E+IR++ IL+Q  +P+ A ++ D++ V 
Sbjct: 453 VAEANRYFAAQAPWALRKTDPARMATVLWVTAELIREVGILVQPVMPESAARLLDLVVVP 512

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            + R F  L    RL  G +L      +FPR++
Sbjct: 513 ADERGFDRLGAGHRLPAGRVLPAPVG-VFPRYV 544


>gi|300119133|ref|ZP_07056834.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298723455|gb|EFI64196.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 660

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|229107725|ref|ZP_04237362.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228675698|gb|EEL30905.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 660

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVEPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|196047404|ref|ZP_03114617.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862090|ref|YP_002747468.1| methionyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229182433|ref|ZP_04309685.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|196021806|gb|EDX60500.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788827|gb|ACO29044.1| methionine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228601013|gb|EEK58581.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 660

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  ++SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWESLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|111022628|ref|YP_705600.1| methionyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110822158|gb|ABG97442.1| methionine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 519

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 262/510 (51%), Positives = 352/510 (69%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   Y++TAIAYPN  PHIGHAYE I +D LARF RLDG DV F TGTDEHG K+ + A
Sbjct: 9   SRPPFYLTTAIAYPNGVPHIGHAYEYISSDALARFKRLDGFDVYFMTGTDEHGLKMQQTA 68

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F  M   L+IS+D FIRTT+  H +  + +W+++ D GDIY  
Sbjct: 69  AKEGIDVRELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWRRMLDNGDIYLD 128

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  YFF+LS YQDKLL  YE
Sbjct: 129 TYSGWYSVRDEAFYTEAETTLQDDGSRLSTETGTPVEWTEESTYFFKLSEYQDKLLRLYE 188

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE++SFVK GLKDLS+SR TFDWG+ +PD P+++MYVW+DALTNYLT 
Sbjct: 189 ENPDFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVPVPDHPEHVMYVWVDALTNYLTG 248

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D       KFWPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KGE
Sbjct: 249 AGYPDTDSEQFGKFWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLYNKGE 308

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+NADLAN +GNL
Sbjct: 309 KMSKSVGNVVDPVAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRINADLANELGNL 368

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ D  +PTPG  TE D ++L+    +L  +R     Q +H AL  + S++
Sbjct: 369 AQRSLSMVAKNCDAQVPTPGELTEDDTAMLAQADALLGRVRAEYDVQALHLALEAIWSVL 428

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P+R +TVLYVT+EV+R + IL+Q  +P  A KI D+L    
Sbjct: 429 GETNRYFSKQEPWVLRKTDPERMATVLYVTLEVVRIVGILVQPVMPDAAEKILDLLGQKA 488

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + R F  L  R+  G  L      +FPR++
Sbjct: 489 DARQFSDLSTRIVAGTPLPAP-SGVFPRYV 517


>gi|229159212|ref|ZP_04287237.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624227|gb|EEK81028.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 660

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 225/522 (43%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++   +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVSGIKELWKKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP   A  TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAYKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDESDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSAIGCIPAGTKVEK-GQPIFPRL 523


>gi|308069627|ref|YP_003871232.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305858906|gb|ADM70694.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 672

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 225/524 (42%), Positives = 330/524 (62%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIGHAY  +  D +AR+ RL G +V + TGTDEHGQKI +
Sbjct: 1   MSNENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +++   LDIS DDFIRTTE+RH    + ++ ++  +GDIY
Sbjct: 61  KASAAGKTPQRFVDDIVAGIQELWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           KG Y GWYS+ DE YY + ++            G       +PV+ ++EE YFFR+S Y 
Sbjct: 121 KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVAGGKSPDSGHPVELVKEECYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P+FI P  R+ E+I+   K GL+DL++SR TFDWGIK+  DP++++YVWI
Sbjct: 181 DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGIKVKGDPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  +      KFWPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+DP+ +I+  G+D LRY+L+RE+  G DG +  +    RVN+
Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+M+ K +DG +P   A  T  D ++  + +    ++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTAFDGALEDMATSTYSKVEEAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  +   +S  ++Y D  +PW L K    R   S+V+   VE +R  +ILLQ F+ + 
Sbjct: 421 VALTAISQFISRSNKYIDETQPWNLAKDEAKRRELSSVMLHLVESLRIASILLQPFLTRA 480

Query: 470 ANKIFDILFVA-DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +KI++ L ++  E   + S  Q  R+  G  L K  +PIFPR 
Sbjct: 481 PHKIWEQLGISQGELTTWDSGKQFGRIPEGTQLVK-GNPIFPRL 523


>gi|206972593|ref|ZP_03233536.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229176639|ref|ZP_04304044.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188324|ref|ZP_04315373.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|206732495|gb|EDZ49674.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228595123|gb|EEK52893.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606806|gb|EEK64222.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 660

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|212637881|ref|YP_002314401.1| methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559361|gb|ACJ32416.1| Methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 656

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 214/514 (41%), Positives = 329/514 (64%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 9   TKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 68

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTTE+RH      ++ ++ ++GDIY  
Sbjct: 69  EEKGVTPQQYVDEIVAGIKELWKKLDISYDDFIRTTEQRHKQVVEKIFARLLEQGDIYLD 128

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++ +G           PV+ ++E+ YFFR+S Y D+LL++YE 
Sbjct: 129 EYEGWYCTPCESFYTERQLVEGN----CPDCGRPVEKVKEQSYFFRMSKYVDRLLAFYEE 184

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGI +P DP++++YVWIDAL+NY+T 
Sbjct: 185 NPQFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIPVPGDPKHVIYVWIDALSNYITA 244

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L K  
Sbjct: 245 LGYGTENDEKYKTYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDG 304

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 305 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNL 364

Query: 362 VSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+V+MI K + G +P   G  T  DE ++ +    +++  E M+     +AL  V  L
Sbjct: 365 LNRTVAMIEKYFAGRVPVYSGTHTSFDEQLVQMAYDTVRQYEEAMEQMQFSQALTAVWQL 424

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     ++ ++V+    E +R +A+LLQ F+     ++F  L 
Sbjct: 425 ISRTNKYIDETQPWVLAKDEATREQLASVMSHLAESLRYVAVLLQPFLTATPKRMFAQLG 484

Query: 479 VADENR-CFQSLDQRLKPGF-MLHKTFDPIFPRF 510
           + DE    + SL          + +   P+FPR 
Sbjct: 485 IQDEKLMSWDSLQTFGASQHERMVEKGAPLFPRL 518


>gi|296329539|ref|ZP_06872025.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672736|ref|YP_003864407.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153282|gb|EFG94145.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305410979|gb|ADM36097.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 664

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 221/521 (42%), Positives = 330/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +D  +    GA TE D+++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELHSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE  + + S+    +      +  +P+FPR 
Sbjct: 483 EKMFEQLGITDEALKAWDSITTFGQLKDTKVQKGEPLFPRL 523


>gi|308171929|ref|YP_003918634.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604793|emb|CBI41164.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 663

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 221/521 (42%), Positives = 327/521 (62%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+     + +   LDIS+DDFIRTTE RH +    +++K+ D GDIY 
Sbjct: 63  AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I    G  T+ D+ + SV    +Q   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDQELSSVAGETVQAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K         +V+Y   E +R  A+LLQ F+ +  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPEKEKELRSVMYHLAESLRISAVLLQPFLTQTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F  L V D++ + + S+    +      K  +P+FPR 
Sbjct: 483 EKMFAQLGVEDQSLKAWDSIQTFGQLKSTKVKKGEPLFPRL 523


>gi|228937341|ref|ZP_04099988.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970227|ref|ZP_04130887.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976797|ref|ZP_04137210.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782893|gb|EEM31058.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789462|gb|EEM37381.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822299|gb|EEM68280.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326937830|gb|AEA13726.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 660

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRIVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|328551739|gb|AEB22231.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328909999|gb|AEB61595.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 663

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 221/521 (42%), Positives = 327/521 (62%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+     + +   LDIS+DDFIRTTE RH +    +++K+ D GDIY 
Sbjct: 63  AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I    G  T+ D+ + SV    +Q   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDQELSSVAGETVQAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K         +V+Y   E +R  A+LLQ F+ +  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPEKEKELRSVMYHLAESLRISAVLLQPFLTQTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F  L V D++ + + S+    +      K  +P+FPR 
Sbjct: 483 EKMFAQLGVEDQSLKAWDSIQTFGQLKSTKVKKGEPLFPRL 523


>gi|311113865|ref|YP_003985087.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945359|gb|ADP41653.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 515

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 262/507 (51%), Positives = 354/507 (69%), Gaps = 4/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  
Sbjct: 5   PFYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQ 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K   D+NS  F+ M D L ISYD FIRTT+  H++  + +WK++ + GDIY   Y+
Sbjct: 65  GKTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYA 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEAYY +DE  +    +Y  +    V+W EEE YFFRLS Y DKLL     +  
Sbjct: 125 GWYSVRDEAYYAEDETEERDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLE-LYKNEG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           ++ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 184 YVFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +       K+WPADLH+IGKDI RFH+IYWPAFL SA L LPK+VF HGF+L  GEK+SK
Sbjct: 244 NTDGELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP +++   G+D +R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  RS
Sbjct: 304 SVGNVVDPADLVAAFGLDQVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+ DG +PTPG FTE+D  IL+  S + + +R +   Q  HRAL ++ +++++ +
Sbjct: 364 LSMVAKNCDGRVPTPGEFTEADRKILAGASALYEPVRADYDEQAFHRALERIWTVLADTN 423

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
            YF  Q+PW L+K    +R +TVLYVT+EV+RQ+AIL+Q  +P    K+ D+L VA+ E 
Sbjct: 424 AYFAEQEPWTLRKNGEFERMNTVLYVTLEVVRQVAILMQPVMPGSMEKLLDLLGVAEGEE 483

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F +L + L  G  L     P+FPR+
Sbjct: 484 RLFAALPKNLTAGKELPAP-TPVFPRY 509


>gi|294083928|ref|YP_003550685.1| methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663500|gb|ADE38601.1| Methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 516

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 258/514 (50%), Positives = 355/514 (69%), Gaps = 13/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N +PHIGHAY  +  DV+ARF RLDG +V F TGTDEHGQK+ KAAQ 
Sbjct: 4   KKFYITTPIYYVNDKPHIGHAYTTLACDVMARFKRLDGFEVKFLTGTDEHGQKVEKAAQV 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG + + F +  S+NFRD+   L+ S DDFIRTTE+RH   C+ LW+ + DKG I    Y
Sbjct: 64  AGTSPQEFTNAVSQNFRDLTTQLNFSNDDFIRTTEERHKLACQQLWRILLDKGYIRLDTY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY++RDEA+Y  DE+  G           PV+W+EE  YFF LS +QDKLL++YE++P
Sbjct: 124 AGWYAVRDEAFYTKDEIVDGK-----APSGAPVEWVEEPSYFFDLSKFQDKLLAFYEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  R NEV SFVK GL+DLS+SR +F WG+ +PDD  ++MYVW+DALTNY+T TG+
Sbjct: 179 DFVAPASRFNEVKSFVKGGLRDLSVSRASFKWGVPVPDDDAHVMYVWLDALTNYITATGW 238

Query: 245 L----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
                     +  K WPADLH++GKDILRFHA+YWPAFL++A+LPLPK+VF+HG+  ++G
Sbjct: 239 PVDGAFGNAETYEKLWPADLHMVGKDILRFHAVYWPAFLMAADLPLPKRVFAHGWWTNEG 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGNVIDP+ + E  G+D  RYFL+RE+  GKDG +    + +R+N+DLAN +GN
Sbjct: 299 QKISKSLGNVIDPVALSEIYGLDQTRYFLMREVPFGKDGDFSVQAMIQRMNSDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L  R +SMI K+ +G++P  P + +  D +IL+ C  +L ++R ++  Q  H AL  +  
Sbjct: 359 LSQRVISMIFKNCEGVMPALPVSPSPEDNAILTACDALLDQVRIHIDQQSFHEALRSIWD 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++  +RY D+Q PW LKKT+P R   VL V  E+IRQ AIL Q F+P+   KI D L V
Sbjct: 419 VIAAANRYVDSQAPWGLKKTDPARMQEVLAVLAEIIRQFAILTQPFMPQSTAKILDQLGV 478

Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            ++ R F +L    RL  G ++ K  +P+FPRF+
Sbjct: 479 DEKARGFDTLAGQVRLATGHVIGKP-EPVFPRFV 511


>gi|30018309|ref|NP_829940.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229125556|ref|ZP_04254589.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|38258299|sp|Q81JA8|SYM1_BACCR RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|29893849|gb|AAP07141.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228657873|gb|EEL13678.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 660

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 222/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + ++ISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMNISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFSGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|297528406|ref|YP_003669681.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251658|gb|ADI25104.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 650

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 223/514 (43%), Positives = 332/514 (64%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI K +DG+IP   G  T  D+ +      V+++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIEKYFDGVIPPYRGPKTPFDQELAQTAREVVRQYEEAMEGMEFSVALAAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     D  + V+    E +R +A+LLQ F+ +   ++F  L 
Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHMAVLLQPFLTRTPERMFAQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           + D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511


>gi|291482409|dbj|BAI83484.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 664

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 220/521 (42%), Positives = 331/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +D  +    GA TE D+++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + D++ + + S+    +      +  +P+FPR 
Sbjct: 483 EKMFEQLGITDDSLKAWDSITAFGQLKDTKVQKGEPLFPRL 523


>gi|229089170|ref|ZP_04220452.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228694133|gb|EEL47814.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 660

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 338/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|16077106|ref|NP_387919.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307847|ref|ZP_03589694.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312169|ref|ZP_03593974.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317102|ref|ZP_03598396.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321365|ref|ZP_03602659.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|586060|sp|P37465|SYM_BACSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|467427|dbj|BAA05273.1| methionyl-tRNA synthetase [Bacillus subtilis]
 gi|2632305|emb|CAB11814.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 664

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 221/521 (42%), Positives = 330/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +D  +    GA TE D ++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDHTLTSVAEETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE+ + + S+    +      +  +P+FPR 
Sbjct: 483 EKMFEQLGITDESLKAWDSITAFGQLKDTKVQKGEPLFPRL 523


>gi|49477589|ref|YP_034392.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196036355|ref|ZP_03103752.1| methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218901239|ref|YP_002449073.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228925292|ref|ZP_04088389.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931541|ref|ZP_04094448.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943845|ref|ZP_04106231.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229119701|ref|ZP_04248963.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|301051774|ref|YP_003789985.1| methionine--tRNA ligase [Bacillus anthracis CI]
 gi|49329145|gb|AAT59791.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|195990985|gb|EDX54956.1| methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218535747|gb|ACK88145.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228663726|gb|EEL19304.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228815802|gb|EEM62037.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828093|gb|EEM73820.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834339|gb|EEM79879.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|300373943|gb|ADK02847.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 660

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 338/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|228918989|ref|ZP_04082369.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840638|gb|EEM85899.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|206977934|ref|ZP_03238821.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|229194429|ref|ZP_04321233.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206743840|gb|EDZ55260.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|228589019|gb|EEK47033.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 225/522 (43%), Positives = 339/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHISWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|229170889|ref|ZP_04298492.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612555|gb|EEK69774.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 222/522 (42%), Positives = 343/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G+      +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGEKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKIFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRANKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|228983294|ref|ZP_04143508.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229153817|ref|ZP_04281948.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629621|gb|EEK86317.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228776408|gb|EEM24760.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 225/522 (43%), Positives = 342/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    N
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPN 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|218895174|ref|YP_002443585.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218546007|gb|ACK98401.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 342/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ+ I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQIGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|217957614|ref|YP_002336156.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229136885|ref|ZP_04265513.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217064186|gb|ACJ78436.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228646550|gb|EEL02756.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 225/522 (43%), Positives = 339/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHISWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|229027885|ref|ZP_04184040.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228733399|gb|EEL84226.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTVGCIPAGTKVEK-GQPIFPRL 523


>gi|324324028|gb|ADY19288.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 660

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  L+S  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLISRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E +  ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTEEAHTSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|310642692|ref|YP_003947450.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Paenibacillus
           polymyxa SC2]
 gi|309247642|gb|ADO57209.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Paenibacillus
           polymyxa SC2]
          Length = 672

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/524 (42%), Positives = 330/524 (62%), Gaps = 15/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIGHAY  +  D +AR+ RL G +V + TGTDEHGQKI +
Sbjct: 1   MSSENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T + FVD      +D+   LDIS DDFIRTTE+RH    + ++ ++  +GDIY
Sbjct: 61  KASAAGKTPQRFVDDIVAGIQDLWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           KG Y GWYS+ DE YY + ++            G       +PV+ ++EE YFFR+S Y 
Sbjct: 121 KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVTGGKSPDSGHPVELVKEESYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P+FI P  R+ E+I+   K GL+DL++SR TFDWG+K+  DP++++YVWI
Sbjct: 181 DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY  +      KFWPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+DP+ +I+  G+D LRY+L+RE+  G DG +  +    RVN+
Sbjct: 301 HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+M+ K +DG +P   A  T  D +++ + +    ++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTSFDAALVDMATSTYSKVEEAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL  +   +S  ++Y D  +PW L K    R   ++V+   VE +R  +ILLQ F+ + 
Sbjct: 421 VALTAISQFISRSNKYIDETQPWNLAKDEEKRSELASVMVHLVESLRIASILLQPFLTRA 480

Query: 470 ANKIFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            ++I++ L +   E   + S  Q  R+  G  L K  +PIFPR 
Sbjct: 481 PHQIWEQLGIRQGELTTWDSGKQFGRIPEGTQLVK-GNPIFPRL 523


>gi|257899755|ref|ZP_05679408.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837667|gb|EEV62741.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 669

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 215/521 (41%), Positives = 320/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+   K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K        ++V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKNAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDPETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|89101166|ref|ZP_01173999.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           NRRL B-14911]
 gi|89084134|gb|EAR63302.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           NRRL B-14911]
          Length = 653

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/517 (43%), Positives = 331/517 (64%), Gaps = 11/517 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+ + +  Y++T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI 
Sbjct: 1   MEGKLKTFYLTTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGYDVMYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+  GVT + +VD+     +D+   LDISYDDFIRTT+ RH      ++ ++ ++GDI
Sbjct: 61  QKAEEKGVTPQEYVDEIVDGIKDLWSKLDISYDDFIRTTQDRHKQVVEKIFARLLEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y GWY    E+Y+ + ++  G           PV  ++EE YFF++S Y D+LL Y
Sbjct: 121 YLGEYEGWYCTPCESYFTERQLVDGN----CPDCGRPVNKVKEESYFFKVSKYADRLLKY 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+PD+P++++YVWIDAL+NY
Sbjct: 177 YEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPDNPKHVVYVWIDALSNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T  GY    D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 237 ITALGYGTEDDSKYLNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+D+LRY+L+RE+  G DG +  +G  +RVN DLAN +
Sbjct: 297 KDGKMSKSKGNVVDPVTLIDRYGLDSLRYYLLREVPFGADGVFTPEGFVERVNFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K +DG IP   G+  E D+ +L +    + +  E M+      AL+ V
Sbjct: 357 GNLLNRTVAMIEKYFDGTIPAYQGSEGEFDKQLLDMNKETVAKYEEAMEKMEFSVALSSV 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             LVS  ++Y D  +PW L K     +    V++   E +R+  +LL+ F+ +  + IF+
Sbjct: 417 WQLVSRTNKYIDETQPWVLAKDEARKEELGNVMFHLAESLRRTGVLLKPFLTRTPDGIFN 476

Query: 476 ILFV-ADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
            L V  +E   ++SL+   L P        DPIFPR 
Sbjct: 477 QLNVNTEELTSWESLETFGLIPENTKVVKGDPIFPRL 513


>gi|163938046|ref|YP_001642930.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009548|ref|ZP_04166775.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053885|ref|ZP_04195320.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131046|ref|ZP_04259959.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163860243|gb|ABY41302.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228652383|gb|EEL08307.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721426|gb|EEL72946.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751692|gb|EEM01491.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 660

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 226/524 (43%), Positives = 342/524 (65%), Gaps = 15/524 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MKE  K  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI 
Sbjct: 1   MKEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDI
Sbjct: 61  KKAEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQ 173
           Y   Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y 
Sbjct: 121 YLDEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHAVELVREESYFFRMGKYV 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+
Sbjct: 181 DRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWV 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N 
Sbjct: 301 HGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+   
Sbjct: 421 VALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVA 480

Query: 470 ANKIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 481 PSKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|257882321|ref|ZP_05661974.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257817979|gb|EEV45307.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
          Length = 669

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 216/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+   K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKTEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  L+S  ++Y D  +PW L K    +A   +V+    E +R  AILLQ  + +  
Sbjct: 421 ALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 481 EKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 521


>gi|220913018|ref|YP_002488327.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859896|gb|ACL40238.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 519

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 257/511 (50%), Positives = 343/511 (67%), Gaps = 3/511 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   YI+TAI YPN  PHIGHAYE I  D +ARF RLDG DV+F TGTDEHG KIA+ 
Sbjct: 4   SEKTPFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQT 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  VD+N+  ++   + L I+YD FIRTT++ H+   + +WKK+   GDIY 
Sbjct: 64  AEKEGITPKELVDRNAEIYKAAHEALGITYDRFIRTTDEDHYAASQAIWKKMEANGDIYL 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y GWYS+RDEA+Y +DE     DG  Y+ +    V W  EE YFFRLSAYQDKLL+ Y
Sbjct: 124 DKYEGWYSVRDEAFYGEDETVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQDKLLALY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+ PEF  P  R NEVISFVK GL+DLS+SR TFDWG+ +P +  ++MYVW+DALTNYLT
Sbjct: 184 EAQPEFGAPQSRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNSNHVMYVWVDALTNYLT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       +FWPAD+HVIGKDI RFHAIYWPAFLLSA L LPK+V  HGF+ + G
Sbjct: 244 GVGYPDVDSEKFRRFWPADVHVIGKDISRFHAIYWPAFLLSAGLELPKRVMIHGFLHNNG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+ P + +E+ G+D +R+F +RE+  G DG Y+ + +  R+N+DLAN  GN
Sbjct: 304 VKMSKSLGNVVAPADFVEQYGLDQVRFFFLREVPFGADGSYNHEAIVGRMNSDLANNFGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G +PTPGAFT++D +IL     +L   R     Q   RAL  + ++
Sbjct: 364 LAQRSLSMVAKNCGGAVPTPGAFTDADTAILEQAGGLLDNARAAFDKQEFSRALEAIWAV 423

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + + YF  Q PW L+KT+ +R +TVLYVT+EV+R +AIL Q  +P    ++ D L   
Sbjct: 424 LGDTNAYFAEQAPWVLRKTDVERMNTVLYVTLEVLRIVAILAQPVMPGSTARLLDALGQP 483

Query: 481 D-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + R F ++  R+  G  L     P+FP++
Sbjct: 484 EGDARQFGAVATRIAAGTPLPAPA-PVFPKY 513


>gi|228950587|ref|ZP_04112722.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228809062|gb|EEM55546.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 660

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      + + + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKGLWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|229067803|ref|ZP_04201121.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715287|gb|EEL67145.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 660

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLIDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|85715531|ref|ZP_01046512.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
 gi|85697726|gb|EAQ35602.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
          Length = 695

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 266/508 (52%), Positives = 362/508 (71%), Gaps = 4/508 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ  
Sbjct: 185 TFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQRE 244

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++      +N+   R + + L IS+D FIRT+E  HH + + +WK++++ GDIY   YS
Sbjct: 245 NISALELATRNAELLRKLDETLHISFDRFIRTSESAHHRSVQEIWKRMAENGDIYLSNYS 304

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+L++YQD+LL+ YES P+
Sbjct: 305 GWYSVRDEAYYAEDETIVGEDNVRRGPQGTPVEWVEEKSYFFKLASYQDRLLALYESEPD 364

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV+SFVK GLKDLS+SR  FDWGIK+PDDP+++MYVW+DALTNY+T  G+ 
Sbjct: 365 FIGPDSRRNEVVSFVKGGLKDLSISRTNFDWGIKVPDDPEHVMYVWVDALTNYITGVGFP 424

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +  + S  +FWPA +H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+SK
Sbjct: 425 NEDE-SNWRFWPAGVHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMSK 483

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  +  + GVD +RYF +RE+  G DG Y+ + +  R+NADLAN  GNL  RS
Sbjct: 484 SVGNVVDPFSLAAQYGVDQMRYFFLREVPFGHDGSYNHEAIVARINADLANDFGNLAQRS 543

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SMI K + G++P PG F++SD++IL+    ++   RE M+ Q IH+AL  + ++V+E +
Sbjct: 544 LSMIAKQHGGVLPEPGDFSDSDKAILAQADGMIAVAREAMKTQQIHQALNAIWAVVAEAN 603

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P+   K+ DIL +  + R 
Sbjct: 604 RYFAGEAPWVLAKTDPARQRTVLYVTAEVVRQIAILAQPAMPEACAKMLDILGIPTDERN 663

Query: 486 FQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           F  L    R+KPG ML     P+FPR++
Sbjct: 664 FAMLGGHVRIKPGTMLPPPV-PVFPRYV 690


>gi|52145179|ref|YP_081651.1| methionyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51978648|gb|AAU20198.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 660

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 339/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|75759600|ref|ZP_00739686.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74492891|gb|EAO56021.1| Methionyl-tRNA synthetase  / Protein secretion chaperonin CsaA
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 669

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 12  EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 71

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 72  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 131

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 132 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 191

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 192 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 251

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 252 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 311

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 312 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 371

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 372 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 431

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 432 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 491

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 492 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 532


>gi|229165027|ref|ZP_04292823.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228618412|gb|EEK75441.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 660

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 226/524 (43%), Positives = 342/524 (65%), Gaps = 15/524 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MKE  K  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI 
Sbjct: 1   MKEENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDI
Sbjct: 61  KKAEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQ 173
           Y   Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y 
Sbjct: 121 YLDEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHAVELVREESYFFRMGKYV 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+
Sbjct: 181 DRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWV 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N 
Sbjct: 301 HGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N    
Sbjct: 361 DLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+   
Sbjct: 421 VALSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVA 480

Query: 470 ANKIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            +K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 481 PSKMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|228912778|ref|ZP_04076426.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846838|gb|EEM91842.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 660

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 337/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V     G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMVGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|228898792|ref|ZP_04063075.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228860817|gb|EEN05194.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 660

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|154684557|ref|YP_001419718.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350408|gb|ABS72487.1| MetS [Bacillus amyloliquefaciens FZB42]
          Length = 663

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 219/521 (42%), Positives = 326/521 (62%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QDNNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+     + +   LDIS+DDFIRTTE RH +    +++K+ D GDIY 
Sbjct: 63  AEEENITPQAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLKFYEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYITALGYDTENDELYKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG I    G  T+ D  + SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMIQKYFDGEIGSYEGNVTDFDSELSSVAGETVKAYEKAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K         +V+Y   E +R  A+LLQ F+ +  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDQEKEKELRSVMYHLAESLRISAVLLQPFLTQTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F  L V D++ + + S+    +      K  +P+FPR 
Sbjct: 483 EKMFAQLGVEDQSLKAWDSIQTFGQLKNAKVKKGEPLFPRL 523


>gi|300741759|ref|ZP_07071780.1| methionine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380944|gb|EFJ77506.1| methionine--tRNA ligase [Rothia dentocariosa M567]
          Length = 515

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 261/507 (51%), Positives = 353/507 (69%), Gaps = 4/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  
Sbjct: 5   PFYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKQ 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K   D+NS  F+ M D L ISYD FIRTT+  H++  + +WK++ + GDIY   Y+
Sbjct: 65  GKTAKELADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYA 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEAYY +DE  +    +Y  +    V+W EEE YFFRLS Y DKLL     +  
Sbjct: 125 GWYSVRDEAYYAEDETEERDGQRYAISTGTEVEWTEEESYFFRLSKYADKLLD-LYKNEG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           ++ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 184 YVFPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           +       K+WPADLH+IGKDI RFH+IYWPAFL SA L LPK+VF HGF+L  GEK+SK
Sbjct: 244 NTDGELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGLELPKRVFGHGFLLVNGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP +++   G+D +R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  RS
Sbjct: 304 SVGNVVDPADLVAAFGLDQVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+ DG +P PG FTE+D  IL+  S + + +R +   Q  HRAL ++ +++++ +
Sbjct: 364 LSMVAKNCDGRVPVPGEFTEADRKILAGASALYEPVRADYNEQAFHRALERIWTVLADTN 423

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
            YF  Q+PW L+K    +R +TVLYVT+EV+RQ+AIL+Q  +P    K+ D+L VA+ E 
Sbjct: 424 AYFAEQEPWTLRKNGEFERMNTVLYVTLEVVRQVAILMQPVMPNSMEKLLDLLGVAEGEG 483

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F +L + L  G  L     P+FPR+
Sbjct: 484 RLFAALPKNLTAGKELPAP-TPVFPRY 509


>gi|261417531|ref|YP_003251213.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765188|ref|YP_004130689.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261373988|gb|ACX76731.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110054|gb|ADU92546.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 650

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 222/514 (43%), Positives = 332/514 (64%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV++ TGTDEHGQKI + A
Sbjct: 2   EKKTFYLTTPIYYPSDRLHIGHAYTTVAGDAMARYKRMRGYDVMYLTGTDEHGQKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT + +VD+     +++   LDISYDDFIRTT++RH      ++ ++ ++GDIY G
Sbjct: 62  EEKGVTPQQYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E++Y + ++  G           PV+ ++EE YFFR+S Y D+LL YYE 
Sbjct: 122 EYEGWYCTPCESFYTERQLVDGN----CPDCGRPVEKVKEESYFFRMSKYVDRLLQYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDAL NY+T 
Sbjct: 178 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF HG++L K  
Sbjct: 238 LGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFGHGWLLMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFIERINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + R+V+MI + +DG+IP   G  T  D+ ++     V+++  E M+      ALA V  L
Sbjct: 358 LHRTVAMIERYFDGVIPPYRGPKTTFDQELVQTAREVVRQYEEAMEGMEFSVALAAVWQL 417

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     D  + V+    E +R  A+LLQ F+ +   ++F  L 
Sbjct: 418 ISRTNKYIDETQPWVLAKDEQKRDELAAVMTHLAESLRHTAVLLQPFLTRTPERMFAQLG 477

Query: 479 VADEN-RCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           + D + + + SL D  L P     +  +P+FPR 
Sbjct: 478 ITDHSLKEWDSLYDFGLIPEGTKVQKGEPLFPRL 511


>gi|321313708|ref|YP_004205995.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019982|gb|ADV94968.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 664

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 222/521 (42%), Positives = 331/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E    YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QENNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTEKRH      +++K+ D GDIY 
Sbjct: 63  AEQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P++P++++YVWID
Sbjct: 183 RLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPENPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +D  +    GA TE D+++ SV    ++   + M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGQIGSYKGAVTEFDQTLTSVAEETVKAYEKVMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K     +   +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE+ + + S+    +      +  DP+FPR 
Sbjct: 483 EKMFEQLGITDESLKAWDSITAFGQLKDTKVQKGDPLFPRL 523


>gi|228995429|ref|ZP_04155099.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764290|gb|EEM13167.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 660

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT++ +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTSQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHAVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWGI++P +P++++YVW+DA
Sbjct: 183 LLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + D+ ++V+    E++RQ+ I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMGIMLMPFLTATPS 482

Query: 472 KIFDILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           KIF  L + DE  + + SL     +     + K   PIFPR 
Sbjct: 483 KIFTQLGLTDEAYQSWDSLSTIGCIPASTKVVK-GQPIFPRL 523


>gi|303241037|ref|ZP_07327547.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591462|gb|EFL61200.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 643

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 207/511 (40%), Positives = 325/511 (63%), Gaps = 9/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A+ 
Sbjct: 4   KTYYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIQRKAEA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT K +VD+     +D+  ++ I+ D FIRTT+K H +  + ++KK+ D+GDIYK  Y
Sbjct: 64  KGVTPKQYVDEIVDGIKDLWKLMKITNDRFIRTTDKNHEEAVQKIFKKLYDQGDIYKSEY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E+++   ++  G            V+  +EE YFFRLS YQD+L+ + E +P
Sbjct: 124 EGWYCTPCESFWTKTQLVDGK----CPDCGREVELTKEESYFFRLSKYQDRLIKFIEENP 179

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P+ R+NE+++   + GL+DL +SR TF+WG+ +  D ++++YVWIDAL+NY+T  G
Sbjct: 180 EFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFNWGVPVTFDEKHVVYVWIDALSNYITALG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           ++   + +  K+WPAD+H++GK+I+RFH I WPA L++   PLPK+++ HG++L +G K+
Sbjct: 240 FMSEDEQAYKKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQIYGHGWLLLEGGKM 299

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+ ++E+ G+DA+RYFL+RE+  G DG +  + L  R+N+DLAN +GNLVS
Sbjct: 300 SKSKGNVVDPVVLVEKYGLDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNLVS 359

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K +DG++P      + D+ +  V      ++ + +       AL ++  ++S 
Sbjct: 360 RTVAMIDKYFDGVMPDERLEGDFDQDLKKVVMETPPKVEQLLDKLQFSSALTEIWKVISR 419

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K   N  R + V+Y   E +R ++ILLQ F+P+   KI++ L + D
Sbjct: 420 TNKYIDETMPWALAKDEANKPRLAGVMYNLAESLRIVSILLQPFMPETPEKIWNQLGLTD 479

Query: 482 ENR-CFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           +    + S  +  + P        D IFPR 
Sbjct: 480 KKTIDWDSTQNWGVYPAGTKVNKGDVIFPRI 510


>gi|311070685|ref|YP_003975608.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871202|gb|ADP34677.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 664

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 218/521 (41%), Positives = 329/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QDKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD+ + + + +   L+IS DDFIRTTE RH      +++K+ D GDIY 
Sbjct: 63  AEEENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTESRHKVVIEKVFQKLFDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDIERNEKGEVVGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL++YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P +P++++YVWID
Sbjct: 183 RLLAFYEENPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVVYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  G+    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF+H
Sbjct: 243 ALFNYLTALGFDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +IE  G+D LRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +D  +    G  TE D+++ SV    ++     M+N     
Sbjct: 363 LANDLGNLLNRTVAMINKYFDGNLGSYEGTITEFDQTLSSVAEETVKSYERAMENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L+S  ++Y D   PW L K         +V+Y   E +R  A+LLQ F+ K  
Sbjct: 423 ALSTLWQLISRTNKYIDETAPWVLAKDPAKEKELQSVMYHLAESLRISAVLLQPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + DE  + + S+ +  +      +  DP+FPR 
Sbjct: 483 KKMFEQLGITDETLKAWDSITRFGQLNKTKVQKGDPLFPRL 523


>gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
 gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
          Length = 690

 Score =  486 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 211/510 (41%), Positives = 315/510 (61%), Gaps = 8/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIGH+Y  +  DV+AR+ R+ G DV+F TGTDEHGQKI + A  
Sbjct: 38  KTFYITTPIYYPSDKLHIGHSYCTVATDVMARYKRMQGFDVMFLTGTDEHGQKIEQKALA 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + +VD+     +++ ++L+IS D F+RTT+  H ++ + ++K + DKG IYKG Y
Sbjct: 98  AGVTPQAYVDKIVDGIKELWNLLNISNDRFVRTTDDYHVESVQKIFKDLYDKGYIYKGSY 157

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E+++ D ++  G            V   EEE YFF+LSA+ D++L  YE +P
Sbjct: 158 KGKYCTPCESFWTDSQLVDGK----CPDCGREVADAEEEAYFFKLSAFSDRILKLYEDNP 213

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F+ P  R NE+I+   K GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  G
Sbjct: 214 QFMEPQSRMNEMINNFIKPGLEDLCVSRTSFKWGIPVTFDPKHVVYVWVDALTNYITALG 273

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +       K+WPAD+H +GK+I+RFH I WPA L++ +LPLPKKVF HG++L +G K+
Sbjct: 274 YGNGRYHDFEKYWPADVHFVGKEIIRFHTIIWPAMLMALDLPLPKKVFGHGWLLLEGGKM 333

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+ +++  GVDA+RYFL+RE   G DG +  + L  R+NADLAN +GNLVS
Sbjct: 334 SKSKGNVVDPVVLVDRYGVDAIRYFLLREFPFGSDGLFSNESLITRINADLANDLGNLVS 393

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RSV+M  K +   +P        D+ I+S+   + +    +M++     AL  +  L+S 
Sbjct: 394 RSVAMAEKYFGDALPAERKSEPIDDEIISIAKSLKETYDRHMESYAFQNALIDIFKLISR 453

Query: 424 VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K   +  R +TV+Y  +E +R  AILL  F+P  + KIF  +    
Sbjct: 454 TNKYIDETAPWVLAKDEANRPRLATVIYNLLECVRICAILLTPFMPATSPKIFAQIGAPA 513

Query: 482 ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
               ++S     L P  +     + +FPR 
Sbjct: 514 AVTAYESAGTWGLLPADVHVHKGEGLFPRI 543


>gi|42779117|ref|NP_976364.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42735032|gb|AAS38972.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 660

 Score =  486 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 222/522 (42%), Positives = 340/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE D ++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDGTLVTFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  L+S  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLISRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E +  ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTEEAHTSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|90417681|ref|ZP_01225593.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337353|gb|EAS51004.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 515

 Score =  486 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 271/509 (53%), Positives = 370/509 (72%), Gaps = 5/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y++TAI+YPN +PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ ++A+ 
Sbjct: 3   ERFYLTTAISYPNGRPHIGHAYEFIATDALARFKRLDGYDVFFLTGTDEHGIKMLQSARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++      +NS  F  MA +L  + DDFIRT+E RH    + +W K++  GD+YK  Y
Sbjct: 63  QGISPAELARRNSAEFEAMAALLGGTNDDFIRTSEDRHVAASQAIWTKMAAAGDVYKDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE     DG+ Y  Q +PV+W+ EE YFF+LS +QD+LL+ YE +P
Sbjct: 123 SGWYSVRDEAYYGEDETELREDGKRYGPQGSPVEWVAEESYFFKLSEFQDRLLALYEDNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P ERRNEV+SFV+SGL+DLS+SR TFDWGI +P D +++MYVW+DALTNYLT TG+
Sbjct: 183 DFIGPAERRNEVMSFVRSGLRDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYLTATGF 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +     ++ +WPADLHVIGKDI+RFH +YWPAFL+SA LP+P++V++HGF+ ++GEK+S
Sbjct: 243 PEEG--ERSAYWPADLHVIGKDIVRFHTVYWPAFLMSAGLPVPRRVYAHGFLFNRGEKMS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNVIDP  +++  G+D LRYFL+RE+  G+DG Y  + +  R N++LAN +GNL  R
Sbjct: 301 KSVGNVIDPAALVDVYGLDRLRYFLLREVPFGQDGNYSHEAIVNRTNSELANDLGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K     +PTPGAF E+D +IL+  + +L ++R  +  Q +H  LA +I++VSE 
Sbjct: 361 SLSMVGKHCGAKVPTPGAFIEADTAILTAANDLLPKVRTMIDRQELHGVLAAIIAVVSEA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  Q+PW L+K++P R  TVL+VT E +R++AILLQ FVP+ A K+ DIL V  + R
Sbjct: 421 NRYFAGQEPWALRKSDPARMETVLFVTAEFLRRVAILLQPFVPESAGKLLDILGVGPDAR 480

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D RL PG  L     PIFPRF+
Sbjct: 481 TFNELTPDVRLAPGADLPAP-QPIFPRFV 508


>gi|283457812|ref|YP_003362406.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133821|dbj|BAI64586.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 514

 Score =  486 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 258/507 (50%), Positives = 349/507 (68%), Gaps = 4/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  
Sbjct: 5   PFYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKL 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K   D+NS  F+ M D L+ISYD FIRTT+  H+   + +WK++ + GDIY   Y+
Sbjct: 65  GKTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYA 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEAYY +DE       +Y  A    V+W EEE YFFRLS Y    L    ++  
Sbjct: 125 GWYSVRDEAYYAEDETEVRDGQRYAIATGTEVEWTEEESYFFRLSKY-GDKLLELYANEG 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNY+T  GY 
Sbjct: 184 FVYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITGLGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  +   AK+WPADLH+IGKDI RFH+IYWPAFL SA + LPK+VF HGF+L  GEK+SK
Sbjct: 244 DTDNELFAKYWPADLHLIGKDITRFHSIYWPAFLWSAGIELPKRVFGHGFLLVNGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  +++  G+DA+R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  RS
Sbjct: 304 SVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+  G +P  G FTE+D  IL   + + + +R +   Q  HRAL ++ +++++ +
Sbjct: 364 LSMVAKNCGGAVPAHGEFTEADRQILDEAAALYEPVRADFDEQAFHRALDRIWTVLADTN 423

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
            YF  Q+PW L+K    DR +TVLYVT+EV+RQ+A+LLQ  +P    K+  +L V + E+
Sbjct: 424 AYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGES 483

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F +L   L PG  L     P+FPR+
Sbjct: 484 RQFAALGTALVPGTELPAPA-PVFPRY 509


>gi|119962681|ref|YP_948227.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119949540|gb|ABM08451.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 519

 Score =  486 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 254/510 (49%), Positives = 343/510 (67%), Gaps = 3/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   YI+TAI+YPN  PHIGHAYE+I  D +ARF RLDG +V F TGTDEHG K+ ++A
Sbjct: 5   EKSPFYITTAISYPNGVPHIGHAYEVIATDAMARFKRLDGHEVFFMTGTDEHGLKMQQSA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T K   D+NS  F+ M+  L IS+D FIRTT++ H+   + +WKK+   GDIY  
Sbjct: 65  EKEGLTAKQLADRNSAAFKQMSQDLGISHDRFIRTTDQDHYAASQAIWKKMEANGDIYLS 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y GWYS+RDEAYY +D+     DG  Y+ +    V W  EE YFFRLS YQDKLL+ YE
Sbjct: 125 KYEGWYSVRDEAYYVEDDTVVKDDGLRYSKETDTLVTWTAEESYFFRLSNYQDKLLALYE 184

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             PEF  P  R NEVISFV+ GL+DLS+SR TFDWG+ +P D +++MYVW+DALTNYLT 
Sbjct: 185 EQPEFGAPQSRFNEVISFVRRGLEDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYLTG 244

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D    S  KFWPAD+HVIGKDI RFHAIYWPAFL+SA L LPK+V  HGF+ + G 
Sbjct: 245 VGYPDIESESFKKFWPADVHVIGKDISRFHAIYWPAFLMSAGLELPKRVMIHGFLTNNGV 304

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P + + + G+D  RYF +RE+  G DG Y+ + +  R+N+DLAN  GNL
Sbjct: 305 KMSKSLGNVVAPQDFVAQYGLDQCRYFFLREVPFGADGNYNHEAIVGRMNSDLANNFGNL 364

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SM+ K+ +G +P PG FT  D+++L+    +L   R     Q   RAL  + +++
Sbjct: 365 AQRSLSMVAKNCEGRVPEPGEFTAEDKALLAQAGELLDTARAAFDKQEFSRALEAIWTVL 424

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + + YF  Q PW L+KT+ +R +TVLYVT+EV+R +AIL Q  +P  + K+ ++L   +
Sbjct: 425 GDTNAYFAEQAPWVLRKTDLERMNTVLYVTLEVVRIVAILAQPVMPSSSAKLLEVLGQPE 484

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            E+R F ++   +  G  L     P+FPR+
Sbjct: 485 GESRQFAAVATPIVAGTELPAPA-PVFPRY 513


>gi|229074100|ref|ZP_04207147.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708994|gb|EEL61120.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 660

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/521 (42%), Positives = 340/521 (65%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     LQ++ + M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKNTLQKVEDAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKGENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E ++ ++SL      PG    +  +PIFPR 
Sbjct: 483 KMFAQLGLTEEAHKSWESLSTIGCIPGGTKVEKGNPIFPRL 523


>gi|229094760|ref|ZP_04225766.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229100827|ref|ZP_04231642.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229113713|ref|ZP_04243149.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669710|gb|EEL25116.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228682594|gb|EEL36656.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228688628|gb|EEL42500.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 660

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/521 (42%), Positives = 340/521 (65%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   KENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     LQ++ + M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLQKVEDAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E ++ ++SL      PG    +  +PIFPR 
Sbjct: 483 KMFAQLGLTEEAHKSWESLSTIGCIPGGTKVEKGNPIFPRL 523


>gi|228905835|ref|ZP_04069733.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853775|gb|EEM98534.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 660

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 222/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTNEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|226309673|ref|YP_002769567.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226092621|dbj|BAH41063.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 675

 Score =  485 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/514 (43%), Positives = 330/514 (64%), Gaps = 9/514 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIG+AY  I  D LAR+ RL G DV + TGTDEHGQK+ + A 
Sbjct: 2   KPTYYITTPIYYPSNKLHIGNAYTTIACDALARYKRLRGYDVYYLTGTDEHGQKLQERAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G     F+D      +D+ + LDISYDDFIRTTE RH +  + +++++ D+GDIY G 
Sbjct: 62  EEGKQPLEFIDPIVDWVKDLWEKLDISYDDFIRTTEPRHKEVVQKVFQRLLDQGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y + DEA++ + +     +G         V+ ++E+ YFFR+S YQD+LL++ E++
Sbjct: 122 YEGFYCVPDEAFWTETQCKTD-NGYICPDCGREVKKVKEKNYFFRMSKYQDRLLAHIEAN 180

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  RRNE+++   K GL+DLS+SR TFDWGIK+P DP++++YVWIDALTNY++  
Sbjct: 181 PEFIQPESRRNEMVNNFLKPGLQDLSVSRSTFDWGIKVPTDPEHVIYVWIDALTNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GYL   D     FWPA++H++GKDILRFH IYWP  L++ ++PLPK++F HG++L    K
Sbjct: 241 GYLSEDDSKYRNFWPANVHMVGKDILRFHTIYWPILLMALDIPLPKQIFGHGWLLMPDGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP  +I+  G D +RYFL+REI  G+DG +  +   +R+N DLAN IGNL+
Sbjct: 301 MSKSKGNVIDPKVLIDRYGSDGVRYFLLREINFGQDGIFTPESFVQRLNYDLANDIGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+ +MI K +DG++P P    E D+S++ +  +    + E+M+      ALA +  LV 
Sbjct: 361 SRTATMIEKYFDGIVPAPQDAGEPDDSLIGLAMKTKALVEEHMEEMRFSNALAHIWELVG 420

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV- 479
             ++Y D   PW L K+     R +TV+Y  VE IR  ++L+Q F+ K   KI+D L + 
Sbjct: 421 RTNKYIDETMPWNLAKSEETKGRLATVMYNLVESIRISSVLIQPFMTKAPAKIWDQLGIL 480

Query: 480 -ADENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
             +E   ++  S+   L  G  + +  + +FPR 
Sbjct: 481 GNEEATNWESASVWGGLPAGSTVSRK-ELLFPRL 513


>gi|52078533|ref|YP_077324.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783895|ref|YP_089724.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319648562|ref|ZP_08002776.1| MetS protein [Bacillus sp. BT1B_CT2]
 gi|52001744|gb|AAU21686.1| methionyl-tRNA synthetase MetS [Bacillus licheniformis ATCC 14580]
 gi|52346397|gb|AAU39031.1| MetS [Bacillus licheniformis ATCC 14580]
 gi|317389329|gb|EFV70142.1| MetS protein [Bacillus sp. BT1B_CT2]
          Length = 662

 Score =  485 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 217/521 (41%), Positives = 328/521 (62%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + 
Sbjct: 3   QEKNTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQQT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T +  VD+ + + + +   LDIS DDFIRTTE+RH      +++K+ D GDIY 
Sbjct: 63  AEKENITPQELVDRAAEDIQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+  Y D
Sbjct: 123 DEYEGWYSIPDETFYTETQLVDVERNEKGEVIGGKSPDSGHPVELIKEESYFFRMGKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL++YE +PEFI P  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWID
Sbjct: 183 RLLAFYEENPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVIYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  G+    D +  K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 243 ALFNYITALGFNTENDENYQKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINYD 362

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K +D  +    G  T  DE + S   + ++   + ++N     
Sbjct: 363 LANDLGNLLNRTVAMVNKYFDGRIQSYEGPVTAFDEPLSSFSQKTIEAYEQAIENMEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELK--KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +   VS  ++Y D   PW L   K       +V+Y   E +R  A+LLQ F+ +  
Sbjct: 423 ALSSLWQFVSRTNKYIDETAPWVLAKDKDKEKELQSVMYHLAESLRITAVLLQPFLTQTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            KIF  L V D + + + S+    +   +  +  +P+FPR 
Sbjct: 483 EKIFAQLGVTDASLKTWDSIQSFGQLKSVTVQKGEPLFPRL 523


>gi|205372010|ref|ZP_03224828.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Bacillus
           coahuilensis m4-4]
          Length = 652

 Score =  485 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 220/518 (42%), Positives = 332/518 (64%), Gaps = 12/518 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E+    YI+T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI 
Sbjct: 1   MQEKLNTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLRGFDVMYLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A+   VT   +VD+  +  +D+ + LDISYDD+IRTTE RH      ++ ++ ++GDI
Sbjct: 61  RKAEEQNVTPIEYVDEIVKGVKDLWEKLDISYDDYIRTTESRHKQVVEKIFAQLVEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y   Y GWY    E+++ + ++  G            V+ ++EE YFF++S Y D+LL Y
Sbjct: 121 YLDQYEGWYCTPCESFFTERQLVDGK----CPDCGREVEKVKEESYFFKVSKYADRLLQY 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDAL+NY
Sbjct: 177 YEENPGFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDALSNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GY    D     +WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 237 ISALGYGSEDDHKYVNYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+D+LRY+L+RE+  G DG +  +G  +R+N DLAN +
Sbjct: 297 KDGKMSKSKGNVVDPVTLIDRYGLDSLRYYLLREVPFGADGVFTPEGFVERINFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+M+ K +DG IP+      E    ++ V    ++   E M+N     AL +V
Sbjct: 357 GNLLNRTVAMMNKYFDGEIPSYSESKNEFSTQLVKVNHETVKGYEEAMENMEFSVALTKV 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+S  ++Y D   PW L K     +  S V+Y   E +R+ A+LL+ F+ K   KIF+
Sbjct: 417 WQLISRTNKYIDETSPWALAKEEERKEELSEVMYHLAESLRRAAVLLKPFLTKTPGKIFE 476

Query: 476 ILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            L V DE+ + ++S++    +  G  + K  +PIFPR 
Sbjct: 477 QLGVTDESLQSWESIERFDSIPSGTKVVKKGEPIFPRL 514


>gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47777767|ref|YP_016640.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183072|ref|YP_026324.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317498|ref|ZP_00390457.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|167635109|ref|ZP_02393426.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641535|ref|ZP_02399783.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688925|ref|ZP_02880127.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707587|ref|ZP_02898040.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655324|ref|ZP_02936853.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569007|ref|ZP_03021908.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|229600122|ref|YP_002864689.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254682335|ref|ZP_05146196.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724179|ref|ZP_05185964.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733574|ref|ZP_05191295.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744658|ref|ZP_05202337.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254762419|ref|ZP_05214261.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38258301|sp|Q81W03|SYM1_BACAN RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|30253549|gb|AAP24091.1| methionine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47551472|gb|AAT29115.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176999|gb|AAT52375.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|167510520|gb|EDR85918.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529583|gb|EDR92333.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127583|gb|EDS96457.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667149|gb|EDT17910.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080165|gb|EDT65258.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559931|gb|EDV13915.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|229264530|gb|ACQ46167.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 660

 Score =  485 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 225/522 (43%), Positives = 337/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+  + G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|251796284|ref|YP_003011015.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543910|gb|ACT00929.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 663

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 211/515 (40%), Positives = 324/515 (62%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A
Sbjct: 4   DKKTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVWYLTGTDEHGQKIERNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++   + + FVD      +++   L+IS DDFIRTTE RH +    ++ ++  + DIYKG
Sbjct: 64  KDKNKSPQQFVDDIVVGIKELWSKLEISNDDFIRTTEPRHKEAVEKIFAQLLKQDDIYKG 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++  G           PV+ ++EE YFFR+S Y D+LL +YE 
Sbjct: 124 EYEGWYCTPCESFFLERQLVNGN----CPDCGRPVELVKEESYFFRMSKYADRLLKHYEE 179

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P DP++++YVWIDAL+NY+T 
Sbjct: 180 NPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGDPKHVIYVWIDALSNYITA 239

Query: 242 TGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY          +FWPAD+H++GK+I+RFH IYWP  L++  LPLPKKVF+HG++L K 
Sbjct: 240 LGYGKEGSSDLYDRFWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKKVFAHGWLLMKD 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ +I+  G+DA+RY+L+RE+  G DG +  +    R+N DLAN +GN
Sbjct: 300 GKMSKSKGNVVDPVTLIDRYGLDAVRYYLLREVPFGSDGTFTPENFVDRINFDLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R+V+MI K +DG IP   G  T  DES+  +    ++++  +M+      AL+ +  
Sbjct: 360 LLNRTVAMIDKYFDGEIPAYGGNVTAFDESLQVLAVETVRQVESSMETMEFSVALSAIWQ 419

Query: 420 LVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            VS  ++Y D   PW L K    +   ++V+Y   E +R ++ILLQ ++     +++  L
Sbjct: 420 FVSRTNKYIDETSPWALAKDEAKKGELASVMYHLAESLRIISILLQPYLTHAPRELWRQL 479

Query: 478 FVAD-ENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
            + + E   ++S  +  + PG        P+FPR 
Sbjct: 480 GLEEGELTAWESTKRFGQLPGGTRVSKGAPVFPRL 514


>gi|229015441|ref|ZP_04172443.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021646|ref|ZP_04178233.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739649|gb|EEL90058.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745860|gb|EEL95860.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 660

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 222/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y   + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTAHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEKYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + ++ ++V+    E++RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEILRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + +E ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTEEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|86749798|ref|YP_486294.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572826|gb|ABD07383.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 514

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 274/511 (53%), Positives = 362/511 (70%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAI+YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  GV T V   +N+  FRDM D   ISYD FIRT+E++HH + + +WK++   GDIY
Sbjct: 61  TAQKEGVETHVLAARNAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y+GWYS+RDEAYY +DE   G D      Q  PV+W+EE  YFF+LSAYQDKLL  Y
Sbjct: 121 LDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWVEERSYFFKLSAYQDKLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D +   +WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDESD-ANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++M+ K  D  +P  G F+E+D+++L++   ++   R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIARPAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+ IL Q  +P  A K+ DIL VA
Sbjct: 420 VAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +L  R+ PG  L     PIFPR++
Sbjct: 480 EGARDFAALPTRIVPGTPLPAPA-PIFPRYV 509


>gi|311028969|ref|ZP_07707059.1| methionyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 663

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 227/522 (43%), Positives = 338/522 (64%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +++  YI+T I YP+   HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI +
Sbjct: 2   VADKKTFYITTPIYYPSGNLHIGHAYTTVAGDAMARYKRLKGFDVMYLTGTDEHGQKIQR 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT++ +VD      +D+ + LDISYDDFIRTTE RH +    ++K++ D+GDIY
Sbjct: 62  KAEEKGVTSQQYVDDIVSGIKDLWEKLDISYDDFIRTTESRHKEVVEKIFKQLLDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
              Y GWYS+ DE YY + ++           G       +PV+ + E+ YFFR+  Y D
Sbjct: 122 LDEYEGWYSVPDETYYREHQLVDPIHENGKVVGGKSPDSGHPVELVREQSYFFRMGKYVD 181

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +PEFI P  R+NE+++   K GL+DL++SR +FDWG+K+P DP++++YVWID
Sbjct: 182 RLLQYYDENPEFIQPESRKNEMVNNFIKPGLEDLAVSRTSFDWGVKVPGDPKHVIYVWID 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+H
Sbjct: 242 ALSNYITALGYGTDNDEKYMKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +RVN D
Sbjct: 302 GWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVNFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K +DG +P   G  TE D+++  +    +Q     M+N     
Sbjct: 362 LANDLGNLLNRTVAMIDKYFDGEVPVYNGNVTEFDQTLSDLAVNTVQHYENAMENMEFSV 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  LVS  ++Y D  +PW L K +   D+ ++ +    E +R + ILL+ F+ +  
Sbjct: 422 ALSSIWQLVSRTNKYIDETQPWVLAKNDETKDQLASAMAHLAESLRFIGILLKPFLTRTP 481

Query: 471 NKIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            KIF  L V +    ++SL    ++  G    K  DPIFPR 
Sbjct: 482 GKIFAQLGVKESLTTWESLSSFGQISAGTKTVKA-DPIFPRL 522


>gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
 gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
          Length = 650

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 214/512 (41%), Positives = 318/512 (62%), Gaps = 8/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+T I YP+ + HIGH+Y  +  D +AR+ R+ G DV+F TGTDEHGQKI   A
Sbjct: 2   DQKTFYITTPIYYPSGKAHIGHSYCTVATDAIARYKRMQGYDVMFLTGTDEHGQKIELNA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K +VD+    F+++  +L+IS D FIRTT+  H    + ++K++ D+G+IYKG
Sbjct: 62  AKAGVTPKEYVDEIVAGFQELWKLLNISNDRFIRTTDDYHVKAVQKIFKELYDRGEIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++  G            V+W EEE YFF+L  Y D+LL  YE 
Sbjct: 122 KYEGWYCTPCESFWTETQLKDGK----CPDCGREVKWAEEEAYFFKLGNYADRLLKLYED 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+FI P  R+NE+I F+K+GL DL +SR +F WGI +  DP++++YVW+DALTNY+T  
Sbjct: 178 QPDFIQPESRKNEMIQFIKNGLDDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITAM 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
           GY    D    K+WPAD+H IGK+I+RFH I WPA L++ +LPLPK+V+ HG++L   G 
Sbjct: 238 GYGSGDDSDYRKYWPADVHFIGKEIVRFHTIIWPAILMALDLPLPKQVYGHGWLLFGDGS 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVILCDRYGVDAIRYFLLREIPFGADGLFTNEALINRINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+ +M+ K + G IP      + D+ ++++ + +     E+M       ALA+V  L+
Sbjct: 358 LSRTTAMVQKYFGGSIPAQRQAEDLDQDLVAMATSLRGRYEESMDGFQFSNALAEVWKLI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L K      R + VLY   E +R ++IL+  F+P+ A KI   +  
Sbjct: 418 ARSNKYIDETMPWALGKAPDKAPRLAAVLYNLCECLRIVSILITPFMPETAPKIQAQIGA 477

Query: 480 ADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             +   + S DQ  L P   +    + +FPR 
Sbjct: 478 GADVCNWDSADQWGLLPADAVVSKGETLFPRI 509


>gi|28210009|ref|NP_780953.1| methionyl-tRNA synthetase [Clostridium tetani E88]
 gi|38258346|sp|Q899D9|SYM_CLOTE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28202444|gb|AAO34890.1| methionyl-tRNA synthetase [Clostridium tetani E88]
          Length = 641

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 208/511 (40%), Positives = 324/511 (63%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIG+ Y  + AD LARF RL G DVLF TGTDEHGQKI + A
Sbjct: 2   NKKTFYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGHDVLFLTGTDEHGQKIQRVA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  K ++D    + +++   ++ISYD FIRTT+  H ++ + ++KK+ ++GDIYKG
Sbjct: 62  EEKGLKPKEYLDNMVDSIKELWKSMNISYDKFIRTTDDYHIESVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++    D         PV+  +EE YFF++S Y D+L+ Y E 
Sbjct: 122 EYEGWYCTPCESFWTESQL----DDHNCPDCGRPVEKTKEEAYFFKMSKYADRLIKYIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P FI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 NPHFIQPESRKNEMLNNFLKPGLQDLCISRTSFDWGIPVSFDNKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  +      KFWPA++H++GKDILRFH IYWP  L++  + LPK+VF HG++L  G 
Sbjct: 238 LGYNSDNQELLEKFWPANVHLVGKDILRFHTIYWPIMLMALGIELPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +++  G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVDHFGEDTVRYYLLREIPFGSDGLFNNELFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+M+ K ++G++P P A    D+ ++++     +++  NM+   I   L ++ +L+
Sbjct: 358 LSRTVAMVQKYFNGIMPAPIAKEPIDDELINLALDTREKVENNMEKLKIPEVLDEIWTLI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     DR  TVLY   E +R +++L+ AF+PK + +I + L V
Sbjct: 418 GRANKYIDETTPWILAKDEDKKDRLGTVLYNLSETLRIISVLISAFIPKTSERINEQLNV 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   +     K G  + K  D +FPR 
Sbjct: 478 DLTTWDSIASFDGTKAGTKVVK-GDALFPRI 507


>gi|184200670|ref|YP_001854877.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580900|dbj|BAG29371.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 517

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 259/512 (50%), Positives = 347/512 (67%), Gaps = 5/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   Y +TAI+YPN  PHIGHAYE I AD L RF RLDG+   F TGTDEHGQK+ +
Sbjct: 1   MTEQTPFYATTAISYPNGAPHIGHAYEAIAADTLVRFQRLDGVATRFQTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +   D NS  FR+M D L ISYD FIRTT++ H    + LWK++   GDIY
Sbjct: 61  TAEKLGTTPRELADANSARFREMDDELGISYDRFIRTTDEDHAAASQELWKRMEANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179
              Y+GWYS+RDEAYY +DE    ADGQ Y+      + W EEE YFFRLS YQD+LL  
Sbjct: 121 LDTYAGWYSVRDEAYYAEDETEVRADGQRYSIGTGTELTWTEEESYFFRLSRYQDRLLEL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y    +F+ P  R +E+ SFV  GL+DLS+SR TFDWG+ +P +P ++MYVW+DALTNYL
Sbjct: 181 Y--RTDFVQPETRSHEIASFVGGGLQDLSISRTTFDWGVPVPGNPDHVMYVWVDALTNYL 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  G+ D       +FWPA +H+IGKDI RFHA+YWPAFL+SA + LP+KVF+HGF+ ++
Sbjct: 239 TGLGFPDTDAPLFREFWPASVHLIGKDIARFHAVYWPAFLMSAGIELPRKVFAHGFLFNQ 298

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS+GNVIDP  ++EE G+D LR+FL+RE+  G+DG Y  D +  R+N+DLAN +G
Sbjct: 299 GEKMSKSVGNVIDPHAMVEEYGLDQLRFFLLREVPFGQDGNYSHDAIAGRINSDLANDLG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL  RS+SM+ K+  G +P PG FT  D ++L+    V+ E R   +    HR L  V  
Sbjct: 359 NLAQRSLSMVAKNLGGEVPEPGEFTAEDLAMLAQAEDVVAEYRSAFEALAFHRGLESVWR 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++  +RYF AQ+PW L+KT+P+R +TVLYVT EV+R +A+L+Q  +P    ++ + L  
Sbjct: 419 VIASANRYFTAQEPWVLRKTDPERMATVLYVTAEVLRIVAVLVQPVMPGSMARLLEQLGQ 478

Query: 480 AD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + E R F +L  RL PG +L K    +FPR+
Sbjct: 479 PEGEARMFSALGTRLAPGTVLPKP-SGVFPRY 509


>gi|91977188|ref|YP_569847.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683644|gb|ABE39946.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 514

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 270/511 (52%), Positives = 366/511 (71%), Gaps = 2/511 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R   YI+TAI+YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+ T V   +N+  FRDM D   +SYD FIRT+E++HH + + +WK++   GDIY
Sbjct: 61  TAQKEGIETHVLAARNAGRFRDMDDRFGVSYDRFIRTSEEQHHRSVQEVWKRMQANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y+GWYS+RDEAYY +DE   G D      Q +PV+W+EE+ YFF+LSAYQD+LL  Y
Sbjct: 121 LDSYAGWYSVRDEAYYAEDETIVGEDNVRRGPQGSPVEWVEEKSYFFKLSAYQDRLLKLY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P+FI P  RRNEVISFVK GLKDLS+SR TFDWG+++P DP+++MYVW+DALTNY+T
Sbjct: 181 EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVEVPGDPEHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D  D +  ++WPAD+HVIGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ +KG
Sbjct: 241 GVGFPDETD-ANWRYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNKG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GN++DP  + ++ GVD +RYF +RE+  G DG Y+ + +  R+NADLAN +GN
Sbjct: 300 EKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSYNHEAIVNRINADLANDLGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS++MI K  +  +P  G F+++D+++L++   ++   R  M  Q IH+AL  V ++
Sbjct: 360 LAQRSLTMIAKQCEAKVPEHGDFSDADKAMLAMADGMIAPARTAMATQQIHQALNAVWAV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF  + PW L KT+P R  TVLYVT EV+RQ+ IL Q  +P  A K+ DIL VA
Sbjct: 420 VAEANRYFAGEAPWALAKTDPPRQKTVLYVTAEVLRQIGILAQPAIPGSATKLLDILGVA 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + R F +L  R+KPG  L     PIFPR++
Sbjct: 480 ADARDFAALATRIKPGTPLPAPA-PIFPRYV 509


>gi|325676285|ref|ZP_08155964.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325552846|gb|EGD22529.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 528

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 255/511 (49%), Positives = 355/511 (69%), Gaps = 2/511 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R   Y++TAIAYPN  PHIGHAYE I +D +ARF RLDG DV F TGTDEHG K+ + 
Sbjct: 14  TDRPPFYLTTAIAYPNGVPHIGHAYEYISSDAIARFKRLDGFDVFFLTGTDEHGLKMQQT 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV  +    +NS  F+ M   L+ISYD FIRTT+  H +  + +W+++   GDIY 
Sbjct: 74  AAKEGVDVRDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYL 133

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYY 180
             YSGWYS+RDEA++ ++E     DG     +   PV+W EE  Y FRLS YQD+LL++Y
Sbjct: 134 DTYSGWYSVRDEAFHAEEETTVLEDGTRLATETGTPVEWTEESNYTFRLSKYQDRLLAHY 193

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNE++SFVKSGLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYLT
Sbjct: 194 EENPDFIAPATRRNEILSFVKSGLKDLSISRTTFDWGVPVPGDPAHVMYVWVDALTNYLT 253

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ +       ++WPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KG
Sbjct: 254 GAGFPNTDSAEFERYWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLFNKG 313

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+N DLAN +GN
Sbjct: 314 EKMSKSVGNVVDPLAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNTDLANELGN 373

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+ D  +PTPG  T++D ++L+    +L+++R     Q +H  L  +  +
Sbjct: 374 LAQRSLSMVAKNCDAQVPTPGELTDADRALLAQADALLEKVRAEFDVQALHLGLEAIWHV 433

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + IL+Q  +P  A KI D+L  A
Sbjct: 434 LGETNRYFSQQEPWVLRKTDPARMATVLYVTLEVVRIVGILVQPVMPGSAEKILDLLGQA 493

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + R F  L  R+  G  L K    +FPR++
Sbjct: 494 PDARAFVDLANRIVAGTPLPKPVG-VFPRYV 523


>gi|255327092|ref|ZP_05368168.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296309|gb|EET75650.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 514

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 260/507 (51%), Positives = 348/507 (68%), Gaps = 4/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAI+YPN  PHIGHAYE I ADVLARF RLDG DV F TGTDEHGQK+   A+  
Sbjct: 5   PFYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKL 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K   D+NS  F+ M D L+ISYD FIRTT+  H+   + +WK++ + GDIY   Y+
Sbjct: 65  GKTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYA 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEAYY +DE       +Y       V+W EEE YFFRLS Y DKLL  Y +   
Sbjct: 125 GWYSVRDEAYYAEDETEVRDGQRYAITTGTEVEWTEEESYFFRLSKYGDKLLELYANEGY 184

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
              P  RRNE+ISFVK GL DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT  GY 
Sbjct: 185 VY-PESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLTGLGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  +    K+WPADLH+IGKDI RFH+IYWPAFL SA + LPK+VF HGF+L  GEK+SK
Sbjct: 244 DTDNELFTKYWPADLHLIGKDITRFHSIYWPAFLWSAGVELPKRVFGHGFLLVNGEKMSK 303

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+DP  +++  G+DA+R+FL+RE++ G+DG Y ++ +  R+N+DLAN +GNL  RS
Sbjct: 304 SVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRS 363

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM+ K+  G +PT G FTE+D  IL   + + + +R +   Q  HRAL ++ +++++ +
Sbjct: 364 LSMVAKNCGGAVPTHGEFTEADRQILDQAAALYEPVRADFDEQAFHRALERIWTVLADTN 423

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-EN 483
            YF  Q+PW L+K    DR +TVLYVT+EV+RQ+A+LLQ  +P    K+  +L V + + 
Sbjct: 424 AYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGDA 483

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F +L   L PG  L     P+FPR+
Sbjct: 484 RQFAALGTALVPGTELPAPA-PVFPRY 509


>gi|147676404|ref|YP_001210619.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146272501|dbj|BAF58250.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 544

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 214/512 (41%), Positives = 319/512 (62%), Gaps = 8/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+   HIGHAY  + AD +ARF ++ G D  F TGTDEHGQKI +AA
Sbjct: 32  SKGTFYITTPIYYPSDNLHIGHAYTTVAADAVARFKKMTGYDTRFLTGTDEHGQKIERAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ G   + FVD+     + +   L++ YDDFIRTTE RH       ++K+ ++GDIYK 
Sbjct: 92  RSRGEDPQEFVDKIVAGIKLLWQKLEVDYDDFIRTTEPRHKKVVSAFFQKLYEQGDIYKA 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    EA++ +  +    +G        PV+ + EE YFFR+S Y ++LL + E 
Sbjct: 152 GYEGWYCTPCEAFWAESRL----EGGNCPDCGRPVELLREESYFFRMSKYAERLLRHIEE 207

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HPEFI P  RRNE++SF+KSGL+DL +SR TF+WGI +P DP +++YVW+DALTNY++  
Sbjct: 208 HPEFIQPASRRNEMVSFIKSGLEDLCVSRTTFNWGIPVPFDPGHVIYVWVDALTNYISAL 267

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D    K+WPAD+H++GKDI+RFH++ WP  L++A L LP++V  HG++L +  K
Sbjct: 268 GYGTEDDSLFKKYWPADVHLMGKDIVRFHSVIWPILLMAAGLELPRQVVGHGWLLLESGK 327

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +I++ GVDA+RY+L+RE+  G DG+Y ++ L +R+N DLAN +GNLV
Sbjct: 328 MSKSKGNVVDPLVLIDKYGVDAIRYYLLRELPFGADGYYSEEALVERINKDLANDLGNLV 387

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS++M+ K + G +  PG     D  ++ +  +    + E M    +  ALA +  LV 
Sbjct: 388 SRSIAMVEKYFQGRVQPPGLPEGPDRELIDLAEQTPAAVEELMDKMDLSGALAAIWRLVG 447

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR +TV+Y   E +R + +++  F+PKL  +++  L + 
Sbjct: 448 RANKYVDETAPWGLAKDPSRADRLATVMYNLAESLRFITVMVSPFMPKLPARVWAQLGLE 507

Query: 481 D--ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  E   ++SL     P     K    +FPR 
Sbjct: 508 NRPELHTWESLVWGKLPANTCVKRGPALFPRI 539


>gi|317133508|ref|YP_004092822.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471487|gb|ADU28091.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 651

 Score =  483 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 204/511 (39%), Positives = 308/511 (60%), Gaps = 8/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y  +  D +ARF R+ G DVLF TGTDEHGQKI + A+
Sbjct: 2   KKTYYITTPIYYTSGTLHIGHGYTTVAGDAMARFRRMQGYDVLFLTGTDEHGQKIEERAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T K +VD+     + +  +LDISYD FIRTT+  H    + +++++ ++GDIYKG 
Sbjct: 62  AAGKTPKAYVDEIVAEIKSLWKLLDISYDRFIRTTDAAHEKVVQQIFRRLYEQGDIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G            V+  EEE YFFRLS Y D+L+ +Y++H
Sbjct: 122 YEGWYCRPCESFWTETQLKDGK----CPDCGREVKRAEEEAYFFRLSKYADRLVEHYKAH 177

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R +E+++   K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T  
Sbjct: 178 PEFISPPSRMHEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDPGHVIYVWIDALSNYITAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D    K+WPAD+H++ K+I+RFH I WPA L++   PLPK+VF HG++L  G+K
Sbjct: 238 GYGTENDADYRKYWPADVHLMAKEIVRFHTIIWPAILMALGEPLPKRVFGHGWLLLGGDK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ + +   VDA+RYFL+REI  G D  +  + L  R+NADLAN +GNLV
Sbjct: 298 MSKSKGNVVDPVLLCKRYSVDAIRYFLLREIPFGADSTFSTEALLGRINADLANDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K + G++P  G     D+ + ++ +   + +  +M       ALA +   VS
Sbjct: 358 SRTVAMVEKYFGGVLPAAGESGPFDDKLRALAAETAKAVEADMDAFQFSNALADIWKFVS 417

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K   D  R + VL    E +R +++ +  F+P  A +I   L + 
Sbjct: 418 RTNKYIDETAPWILAKNEADKPRLAQVLRNLCESVRLISVCIAPFMPATAAEIRRQLGLP 477

Query: 481 DENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
           +    +    +  + P  +  +    +FPR 
Sbjct: 478 EGVPDWSDTARFDVLPDGLRVQKGAALFPRL 508


>gi|217965737|ref|YP_002351415.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217335007|gb|ACK40801.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569716|emb|CAR82895.1| metS [Listeria monocytogenes L99]
          Length = 665

 Score =  483 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 232/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M++     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|298291756|ref|YP_003693695.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928267|gb|ADH89076.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 524

 Score =  483 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 270/509 (53%), Positives = 358/509 (70%), Gaps = 1/509 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+TAI YPN  PHIGHAYE I AD LARF +LDG DV F TGTDEHG K+A+ A+
Sbjct: 8   KPAFYITTAIDYPNGAPHIGHAYEKIAADALARFKKLDGYDVFFLTGTDEHGLKMAQTAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T   +  +N+  F++M  +L + YD FIRTT++ H  + + +W+++ + GDIY G 
Sbjct: 68  KQGLTPIEWATKNATRFKEMDALLGVDYDRFIRTTDEDHILSSQAIWQRMVEAGDIYLGA 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+RDEAYY +DE    ADG     Q  PV+W EE+ YFFRLSAYQ KLL YY++H
Sbjct: 128 YSGWYSVRDEAYYAEDETTVNADGVRLGPQGTPVEWTEEKSYFFRLSAYQQKLLDYYDAH 187

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV SFV+SGL+DLS+SR TF WGI +P D  ++MYVW+DALTNY+T  G
Sbjct: 188 PDFIRPDVRRNEVTSFVRSGLQDLSISRTTFTWGIPVPGDEAHVMYVWVDALTNYITGVG 247

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    S  +FWPADLH+IGKDI+RFHA+YWPAFL+SA +  PK VF+HGFI ++GEK+
Sbjct: 248 YPDTDSASFKRFWPADLHIIGKDIIRFHAVYWPAFLMSAGIAPPKTVFAHGFIHNRGEKM 307

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP ++ +  GVDALRYFL+REI  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 308 SKSVGNVIDPFDLAKAYGVDALRYFLLREIPFGQDGSYSHEAIVARTNADLANDLGNLAQ 367

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+  G +P+PG     D  IL+    +  ++RE M+ Q IH+AL  + ++V++
Sbjct: 368 RSLSMIAKNLSGTLPSPGPLAPDDAEILASADAMGPKVREAMEAQQIHQALGVIWAVVAD 427

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF A  PWEL+KT+P+R  TVL+ T EVIRQ+A+L Q FVP  A K+ D+L ++ + 
Sbjct: 428 ANRYFAASAPWELRKTDPERFGTVLWTTAEVIRQVALLAQPFVPTSAAKLLDLLDISSDA 487

Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRFL 511
           R F S        G  +     P+FPR++
Sbjct: 488 RDFASLGGAGRLAGGTVLPAPAPVFPRYV 516


>gi|290892267|ref|ZP_06555262.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290558093|gb|EFD91612.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 664

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 232/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M++     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|254520460|ref|ZP_05132516.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914209|gb|EEH99410.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 647

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 213/513 (41%), Positives = 325/513 (63%), Gaps = 14/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LAR+ RL G DV+F TGTDEHGQKI + A+
Sbjct: 3   KKTYYITTPIYYPSTKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQRIAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ DKGDIYK  
Sbjct: 63  EKGITPKEHVDEIVSGIKDLWKMMNISYDKFIRTTDDYHIKAVQDIFKKLYDKGDIYKSS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y DKL+ Y E+H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKSKEEAYFFKMSNYADKLMEYIETH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   K GL+DL +SR +F+WG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMVNNFLKPGLQDLCVSRTSFNWGVPVTFDENHVVYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      K+WPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 239 GYGSDNKDLYDKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++E  GVDA+RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 299 MSKSKGNVVDPVTLVENFGVDAVRYYLLREIPFGSDGLFNNEIFIKKINSDLCNDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+MI K +DG+IP        D+ ++S+     +++ + + +  I  AL  +  L+ 
Sbjct: 359 SRTVAMIEKYFDGVIPNNNIKEAIDDELISLALETPKKVNKAIDDLRIPEALENIFELIG 418

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R  ++LL AF+P  + KI + +  +
Sbjct: 419 RANKYIDETTPWILAKDEDKKERLGTVLYNLIESLRFSSVLLSAFLPDTSKKINEQINAS 478

Query: 481 DENRCFQSLDQRLKPGFML---HKTFDPIFPRF 510
             N  F+SL+     G ++    +  + +FPR 
Sbjct: 479 --NITFESLNDFN--GTIVGTKVQKGEALFPRI 507


>gi|115524873|ref|YP_781784.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518820|gb|ABJ06804.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 518

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 275/508 (54%), Positives = 368/508 (72%), Gaps = 2/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  Y++TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ
Sbjct: 8   RDTYYLTTAIAYPNGVPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQ 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T      +N+  FR+M D L++SYD FIRTTE++HH + + +W+++   GDIY   
Sbjct: 68  KEGLTPHDLATRNAGRFREMDDKLNVSYDRFIRTTEEQHHRSSQEIWRRMLKNGDIYLDS 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+RDEAYY +DE   G D      Q +PV+W+EE+ YFF+LSAYQDKLL  Y   
Sbjct: 128 YAGWYSVRDEAYYAEDETTVGEDKVRRGPQGSPVEWVEEKSYFFKLSAYQDKLLKLYADQ 187

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  R+NEV+SFVK GLKDLS+SR TFDWGIK+PD+  ++MYVW+DALTNY+T  G
Sbjct: 188 PDFIGPDSRKNEVVSFVKGGLKDLSVSRTTFDWGIKVPDEEGHVMYVWVDALTNYITGVG 247

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D +  ++WPADLHVIGKDI+RFHA+YWPAFL+SA +P+ K+VF+HGF+ ++GEK+
Sbjct: 248 FPDETDPN-WRYWPADLHVIGKDIIRFHAVYWPAFLMSAGIPVQKRVFAHGFLFNRGEKM 306

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP  + E+ GVD LRYFL+RE+  G+DG Y+ + +  R+NADLAN +GNL  
Sbjct: 307 SKSVGNVVDPFNLAEQYGVDQLRYFLLREVQFGQDGSYNHEAIVNRINADLANDLGNLAQ 366

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K Y  ++P PGAF+++D+++L+    +L+  R  M  Q IH+AL  V ++V E
Sbjct: 367 RSLSMIAKQYASIVPEPGAFSDNDKAMLAQADGMLELARTAMATQQIHQALNAVWAVVGE 426

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EVIRQ+AIL Q  +P  A K+ DIL +  + 
Sbjct: 427 ANRYFAGEAPWALAKTDPPRQKTVLYVTAEVIRQVAILAQPAIPASAAKLLDILAIPADQ 486

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           R F +L  R+ PG  +     P+FPR++
Sbjct: 487 RDFAALPNRITPGTQMPAPA-PVFPRYV 513


>gi|229494943|ref|ZP_04388694.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229318167|gb|EEN84037.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 532

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 261/510 (51%), Positives = 358/510 (70%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER   YI+TAIAYPN  PHIGHAYE I +D LARF RLDG +V F TGTDEHG K+ + A
Sbjct: 22  ERSPFYITTAIAYPNGAPHIGHAYEYISSDALARFKRLDGHEVFFMTGTDEHGLKMQQTA 81

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F+++  VL+ISYD FIRTT+  H    + +W+K++  GDIY  
Sbjct: 82  IKEGIDVRELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLD 141

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  Y FRLSAY+D+LL+ YE
Sbjct: 142 TYSGWYSVRDEAFYTEAETTLLDDGTRQSTETGTPVEWTEESNYTFRLSAYEDRLLALYE 201

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++SFVK GLKDLS+SR TFDWG+++P DP ++MYVW+DALTNYLT 
Sbjct: 202 EHPEFIAPATRRNEIVSFVKGGLKDLSISRTTFDWGVEVPGDPDHVMYVWVDALTNYLTG 261

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +       KFWPA LH+IGKDI RFH +YWPAFL+SA + LP++VF HGF+ +KGE
Sbjct: 262 VGYPNVDSAEFEKFWPASLHIIGKDITRFHTVYWPAFLMSAGIELPERVFVHGFLYNKGE 321

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DPI ++++ G+DA+R+FL+REI+ G+DG Y  + +  R+NADL+N +GNL
Sbjct: 322 KMSKSVGNVVDPIAMVDQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNADLSNELGNL 381

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS++M+ K+ D  +PTPG FTE D ++L+    +L + R     Q +H AL  +  ++
Sbjct: 382 AQRSLTMVAKNCDAQVPTPGEFTEDDLAMLASADALLAKCRSEFDVQALHLALEAIWGVL 441

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + +L+Q  +P  A++I D+L  ++
Sbjct: 442 GETNRYFSKQEPWVLRKTDPARMATVLYVTLEVVRIVGLLVQPVMPDAASRILDLLGQSE 501

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           ENR F  +  R+     L     P+FPRF+
Sbjct: 502 ENRQFADIAVRIDANRKLPAPA-PVFPRFV 530


>gi|312138647|ref|YP_004005983.1| methionine-tRNA ligase metg [Rhodococcus equi 103S]
 gi|311887986|emb|CBH47298.1| methionine-tRNA ligase MetG [Rhodococcus equi 103S]
          Length = 528

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 254/511 (49%), Positives = 354/511 (69%), Gaps = 2/511 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R   Y++TAIAYPN  PHIGHAYE I +D +ARF RLDG +V F TGTDEHG K+ + 
Sbjct: 14  TDRPPFYLTTAIAYPNGVPHIGHAYEYISSDAIARFKRLDGFEVFFLTGTDEHGLKMQQT 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV  +    +NS  F+ M   L+ISYD FIRTT+  H +  + +W+++   GDIY 
Sbjct: 74  AAKEGVDVRDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYL 133

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYY 180
             YSGWYS+RDEA++ ++E     DG     +   PV+W EE  Y FRLS YQD+LL++Y
Sbjct: 134 DTYSGWYSVRDEAFHAEEETTVLEDGTRIATETGTPVEWTEESNYTFRLSKYQDRLLAHY 193

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNE++SFVKSGLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYLT
Sbjct: 194 EENPDFIAPATRRNEILSFVKSGLKDLSISRTTFDWGVPVPGDPAHVMYVWVDALTNYLT 253

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ +       ++WPA+LH+IGKDI RFH +YWPAFL+SA + LPK+VF HGF+ +KG
Sbjct: 254 GAGFPNTDSAEFERYWPANLHIIGKDITRFHTVYWPAFLMSAGIELPKRVFVHGFLFNKG 313

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNV+DP+ ++E+ G+DA+R+FL+REI+ G+DG Y  + +  R+N DLAN +GN
Sbjct: 314 EKMSKSVGNVVDPLAMVEQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNTDLANELGN 373

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+ D  +PTPG  T++D ++L+    +L ++R     Q +H  L  +  +
Sbjct: 374 LAQRSLSMVAKNCDAQVPTPGELTDADRALLAQADALLGKVRAEFDVQALHLGLEAIWHV 433

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + IL+Q  +P  A KI D+L  A
Sbjct: 434 LGETNRYFSQQEPWVLRKTDPARMATVLYVTLEVVRIVGILVQPVMPGSAEKILDLLGQA 493

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            + R F  L  R+  G  L K    +FPR++
Sbjct: 494 PDARAFVDLANRIVAGTPLPKPVG-VFPRYV 523


>gi|165872552|ref|ZP_02217184.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|227812711|ref|YP_002812720.1| methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254756363|ref|ZP_05208392.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|164711680|gb|EDR17225.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|227004168|gb|ACP13911.1| methionine--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 660

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 336/522 (64%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+  + G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DIS DDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISCDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   DR   ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE +  + SL     +  G  + K   PIFPR 
Sbjct: 483 KMFAQLGLTDEAHTSWGSLSTIGCIPAGTKVEK-GQPIFPRL 523


>gi|162139845|ref|YP_318075.2| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 544

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 268/509 (52%), Positives = 363/509 (71%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHGQK+ + AQ 
Sbjct: 33  DTFYITTAIVYPNGAPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGQKMVQTAQR 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++      +N+   R + + LDIS+D FIRT+E  HH + + +WK+++  GDIY   Y
Sbjct: 93  ENISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLSNY 152

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDEAYY +DE   G D      Q  PV+W+EE+ YFF+LSAY+D+LL+ YES P
Sbjct: 153 SGWYSVRDEAYYAEDETVVGEDNVRRGPQGTPVEWVEEKSYFFKLSAYEDRLLALYESEP 212

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFVK GLKDLS+SR TFDWG+K+P DP+++MYVW+DALTNY+T  G+
Sbjct: 213 DFIGPDSRRNEVVSFVKGGLKDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGF 272

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  + S  +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK+V++HGF+ ++GEK+S
Sbjct: 273 PDEDE-SNWRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVYAHGFLFNRGEKMS 331

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP  +  + GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN  GNL  R
Sbjct: 332 KSVGNVVDPFSLAAQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDFGNLAQR 391

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K + G++P PG F+++D++IL+    ++   RE M  Q IH+AL  + S+V+E 
Sbjct: 392 SLSMIAKQHGGVLPEPGDFSDADKAILAQADGMIAIAREAMNTQQIHQALNAIWSVVAEA 451

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P    K+ DIL +  + R
Sbjct: 452 NRYFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPAACAKLLDILGIPADER 511

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D R++PG  L     P+FPR++
Sbjct: 512 NFAMLGGDIRIRPGSALPAPV-PVFPRYV 539


>gi|226307854|ref|YP_002767814.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226186971|dbj|BAH35075.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 532

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 260/510 (50%), Positives = 357/510 (70%), Gaps = 2/510 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER   YI+TAIAYPN  PHIGHAYE I +D LARF RLDG +V F TGTDEHG K+ + A
Sbjct: 22  ERSPFYITTAIAYPNGAPHIGHAYEYISSDALARFKRLDGHEVFFMTGTDEHGLKMQQTA 81

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F+++  VL+ISYD FIRTT+  H    + +W+K++  GDIY  
Sbjct: 82  IKEGIDVRELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLD 141

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDEA+Y + E     DG   + +   PV+W EE  Y FRLSAY ++LL+ YE
Sbjct: 142 TYSGWYSVRDEAFYTESETTLLEDGTRQSTETGTPVEWTEESNYTFRLSAYGERLLALYE 201

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++SFVK GLKD+S+SR TFDWG+K+P DP ++MYVW+DALTNYLT 
Sbjct: 202 EHPEFIAPTTRRNEIVSFVKGGLKDISISRTTFDWGVKVPGDPDHVMYVWVDALTNYLTG 261

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +       KFWPA LH+IGKDI RFH +YWPAFL+SA + LP++VF HGF+ +KGE
Sbjct: 262 VGYPNVDSEEFKKFWPASLHIIGKDITRFHTVYWPAFLMSAGIELPERVFVHGFLYNKGE 321

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DPI ++++ G+DA+R+FL+REI+ G+DG Y  + +  R+NADL+N +GNL
Sbjct: 322 KMSKSVGNVVDPIAMVDQYGLDAVRFFLLREISYGQDGSYSHEAIVTRMNADLSNELGNL 381

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS++M+ K+ D  +PTPG FTE D ++L+    +L + R     Q +H AL  +  ++
Sbjct: 382 AQRSLTMVAKNCDAQVPTPGEFTEDDLAMLASADALLAKCRSEFDVQALHLALEAIWGVL 441

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RYF  Q+PW L+KT+P R +TVLYVT+EV+R + +L+Q  +P  A++I D+L  ++
Sbjct: 442 GETNRYFSKQEPWVLRKTDPARMATVLYVTLEVVRIVGLLVQPVMPDAASRILDLLGQSE 501

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           ENR F  +  R+     L     P+FPRF+
Sbjct: 502 ENRQFADIAVRIDANRKLPAPA-PVFPRFV 530


>gi|296131644|ref|YP_003638891.1| methionyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030222|gb|ADG80990.1| methionyl-tRNA synthetase [Thermincola potens JR]
          Length = 647

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 216/512 (42%), Positives = 329/512 (64%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  + AD +AR+ R+ G DV F TG+DEHGQKI + A+
Sbjct: 2   KKTFYITTPIYYPSDNLHIGHAYTTVAADTIARYKRMTGYDVRFLTGSDEHGQKIERTAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV    +VD+    F+++   LD+ YDDFIRTTE RH +  + ++ ++ ++GDIYK  
Sbjct: 62  ARGVEPIDYVDRIVAGFKNLWRHLDVHYDDFIRTTEPRHKEVVQKIFTRLYEQGDIYKSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E ++ + +  +G           PV+ + EE YFFR+S Y D+LL Y E +
Sbjct: 122 YEGLYCTPCETFWTERQAEEGN----CPDCGRPVERVREESYFFRMSKYADRLLRYIEEN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE+++F+K GL+DL +SR TFDWGIK+P DP++++YVW+DALTNY++  G
Sbjct: 178 PDFIQPVSRRNEMVNFIKQGLEDLCVSRTTFDWGIKVPFDPKHVVYVWVDALTNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    K+WPAD+H++GKDI+RFH I WP  L++   PLPKKV  HG++L +G K+
Sbjct: 238 YGTENDELYKKYWPADVHLVGKDIVRFHTIIWPILLMAIGEPLPKKVMGHGWLLLEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVIDP+ +I++ GVDA+RY+L+RE+  G DG+Y ++ L +R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNVIDPLVLIDKYGVDAIRYYLLRELPFGSDGYYAEEALIQRINSDLANDLGNLIS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++M+ K ++GM+  P    E DE +  +    +++ R  M+   +  ALA +  L+  
Sbjct: 358 RTIAMVEKYFNGMVQAPTEKEEIDEDLRQLAMVTVEDYRNQMEKLELSNALASIWKLIGR 417

Query: 424 VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI--LFV 479
            ++Y D   PW L K      R  TVLY  +EVIR + +L+  F+ +L +K++    L  
Sbjct: 418 ANKYIDETAPWILAKDEAKRPRLGTVLYNLLEVIRIVTVLVSPFMTRLPDKVWVQCGLSG 477

Query: 480 ADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            +E   ++S+ +    P  +  K  + +FPR 
Sbjct: 478 KEECTTWESVQNWGRFPADINVKRGEALFPRI 509


>gi|90424203|ref|YP_532573.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106217|gb|ABD88254.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 522

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 272/510 (53%), Positives = 360/510 (70%), Gaps = 3/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   ++ST I YPN  PHIGHAY  +++D +ARF RLDG DV F TGTDEHG K+ + A 
Sbjct: 9   RPAYFLSTPIFYPNGVPHIGHAYTAMVSDAIARFQRLDGYDVRFLTGTDEHGLKMQQTAI 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     D+NS  FRDM   L+ISYDD+IRTTE RH  +C+ LW  I + GDIY   
Sbjct: 69  AEGLTPLQLADRNSARFRDMMAALNISYDDYIRTTEPRHERSCQALWTAIENNGDIYLDK 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWYS+R EAY+++ E   G DG       +PV+W EEE YFFRLSAYQDKLL  Y   
Sbjct: 129 YAGWYSVRQEAYFDEAETTVGEDGVRREPLGSPVEWTEEETYFFRLSAYQDKLLELYAKV 188

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+LP ER NEV SFVK GL+DLS+SR TFDWGIK+P  P+++MYVWIDALTNY+T  G
Sbjct: 189 PDFVLPRERLNEVASFVKGGLQDLSISRTTFDWGIKVPGAPRHVMYVWIDALTNYITGAG 248

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    S  ++WPA LHVIGKDI+RFHA+YWPAFL+SA + +P++VFSHGF+L++GEK+
Sbjct: 249 YPDVDSDSFKRYWPASLHVIGKDIVRFHAVYWPAFLMSAGVAVPQRVFSHGFLLNRGEKM 308

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP E+ ++ GVD +RYF +RE++ G+DG Y+ + +  R NADLAN +GNL  
Sbjct: 309 SKSVGNVVDPFEMAKQYGVDQMRYFFMREVSFGQDGSYNHEAIVNRTNADLANDLGNLAQ 368

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++MI K   G++P PG F+++D++IL+    +++  R  M  Q IH  L  V ++V+E
Sbjct: 369 RSLTMIGKQLGGVLPEPGDFSDNDKAILAQADAMIELARTAMATQQIHHMLNAVWAVVAE 428

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  A K+ D L +A+E 
Sbjct: 429 ANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVAILAQPVMPASAAKLLDSLGIAEEE 488

Query: 484 RCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
           R F  L   +R++PG  L     PIFPR++
Sbjct: 489 RDFTHLGGHERIRPGTPLPAPA-PIFPRYV 517


>gi|158423799|ref|YP_001525091.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158330688|dbj|BAF88173.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 526

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 278/513 (54%), Positives = 362/513 (70%), Gaps = 3/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ +
Sbjct: 7   MSSKRPFYITTAIAYPNGVPHMGHAYEAIATDCIARFKRLDGYDVRFLTGTDEHGIKMLQ 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG+T +  +D+N   F+ M    ++S DDFIRTTE+RH  + + +W++++ KGDIY
Sbjct: 67  TAQKAGLTPRELLDRNVPAFKAMGPAFNLSNDDFIRTTEERHIKSSQAIWERMAAKGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  YSGWYS+RDEAYY +DE            Q  PV+W+EEE YFFRLSAYQ KLL +Y
Sbjct: 127 KSTYSGWYSVRDEAYYAEDETTVNEQNVRLGPQGTPVEWVEEESYFFRLSAYQQKLLDFY 186

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            ++P FI+P  RRNEV+SFV  GL+DLS+SR TFDWGI +P DP +IMYVW+DALTNY+T
Sbjct: 187 AANPGFIMPEARRNEVVSFVSGGLQDLSISRTTFDWGIPVPGDPAHIMYVWVDALTNYIT 246

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       KFWPADLHVIGKDI+RFHA+YWPAFL SA L  PK+VF HGF+ ++G
Sbjct: 247 ALGYPDTDAELFRKFWPADLHVIGKDIIRFHAVYWPAFLWSAGLEPPKRVFGHGFLFNRG 306

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNV+DP  ++E  GVDA RYF +RE++ G+DG Y  + +  R+NADLAN +GN
Sbjct: 307 EKMSKSVGNVVDPFGLVETYGVDATRYFFLREVSFGQDGSYSHEAIVNRMNADLANDLGN 366

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG++P PG  +  DE+IL++   +L++ RE M+ Q IH+ LA V ++
Sbjct: 367 LAQRSLSMISKNLDGVVPEPGPLSPEDEAILALADGMLEKAREAMEVQAIHQYLAAVWAV 426

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E +RYF AQ PW L+KT+P R  TVL+ T EVIRQ+AIL Q  +P+ A K+ D+L V 
Sbjct: 427 VAEANRYFAAQAPWALRKTDPKRMETVLWTTAEVIRQVAILAQPVMPESAGKMLDLLVVP 486

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            E R F  L    RL  G  +      +FPR++
Sbjct: 487 AEQRGFDVLGGTFRLPGGTAIPAP-TGVFPRYV 518


>gi|83588921|ref|YP_428930.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83571835|gb|ABC18387.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 651

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 216/516 (41%), Positives = 321/516 (62%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   Y++T I YP+ + HIGHA    +AD LAR+ RL G DV F TG+DEHGQKI +
Sbjct: 1   MGDKV-FYVTTPIYYPSDKLHIGHALTTTMADTLARYKRLRGYDVYFLTGSDEHGQKIQR 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ A +    +VD+    F+++   L+ISY+DFIRTTE RH    + L +KI D+GDIY
Sbjct: 60  KAREANLEPIQYVDRIVATFQELWRRLNISYNDFIRTTEPRHARVVQALLQKIYDQGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y GWY    E ++ + ++  G           PV+ ++EE YFFR+S Y D+LL Y 
Sbjct: 120 KSTYEGWYCTPCETFWTERQLVDGN----CPDCGRPVELVKEESYFFRMSKYADRLLQYI 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HP+FI P+ RRNE+ISF++ GL+DL +SR TFDWGI +P DP++++YVW DALTNY++
Sbjct: 176 KDHPDFIQPVTRRNEMISFIEGGLEDLCISRTTFDWGIPVPMDPKHVIYVWFDALTNYIS 235

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY    D    K+WPA +H++GKDI+RFH I WP  L++A +  P++VF HG++L  G
Sbjct: 236 ALGYGTADDHLFRKYWPAAVHLVGKDIVRFHTIIWPIILMAAGIEPPRQVFGHGWLLVDG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ +I+  G DA+RYFL+RE+  G DG+Y ++ L  R N DLAN  GN
Sbjct: 296 GKMSKSRGNVVDPMILIDRYGSDAIRYFLLREMPYGADGYYSEEALINRYNTDLANDFGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+ +MI K   G+I  P A    DE + ++ + +  E+   + +    RALA +  L
Sbjct: 356 LLSRTTAMIEKFNGGVIDPPSAPEPLDEELKNLAAGIPDEVDNALNHYEFARALAAIWRL 415

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+  ++Y +   PW L +      R  TVLY   E +RQ  I++  F+P + ++++D L 
Sbjct: 416 VNRANKYIEETAPWALARDPGQKQRLQTVLYNLAEAVRQATIMVGPFMPGVPDRVWDQLG 475

Query: 479 VAD--ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           + D      ++SL     +  G  + +  + +FPR 
Sbjct: 476 LKDVPAALTWESLATWGGIPAGTRV-RRGEALFPRI 510


>gi|323490978|ref|ZP_08096172.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395334|gb|EGA88186.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 652

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 216/514 (42%), Positives = 322/514 (62%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
             +  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI + A
Sbjct: 4   NNKTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRLRGFDVRFLTGMDEHGQKIEEKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG   + FVD+ +   + +  V+DI+YDDFIRTTE+RH +    ++K   D GDIYKG
Sbjct: 64  NEAGKAPQEFVDEMAAAAKQVWSVMDITYDDFIRTTEERHKEGVERIFKTFLDNGDIYKG 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ ++++  G           PVQ ++EE YFF +  Y  +LL YYE+
Sbjct: 124 EYEGWYCTPCESFFTENQLENGN----CPDCGRPVQKVKEESYFFNMKKYASRLLEYYEN 179

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           + EFI P  R+NE+I+   K GL+DLS+SR +FDWGI +P DP++++YVW+DAL+NY+T+
Sbjct: 180 NVEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIPVPGDPKHVIYVWVDALSNYITS 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K  
Sbjct: 240 LGYGSEDDSLFDKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKDG 299

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  ++E  G+DA RYFL+RE+  G DG +  +   +R N DLAN +GNL
Sbjct: 300 KMSKSKGNVVYPEMLVERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGNL 359

Query: 362 VSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+VSMI K   G++P      TE D  +  V ++ ++   + M+       L+++ +L
Sbjct: 360 LNRTVSMINKYCGGVVPQINDLQTEFDAPLQQVAAQTVKAHEQYMEKMQFSIVLSEIWTL 419

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D  +PW L K     ++ ++V+    E +R  A++LQ F+P    +I + L 
Sbjct: 420 ISRTNKYIDETQPWVLAKDENAKEQLNSVMAHLAESLRMTAVMLQPFLPNAPKQIIEQLG 479

Query: 479 VADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           + +E   + +L    ++  G  +     PIFPR 
Sbjct: 480 LTEEFLAWATLQDFAKIPAGTQVVSKGTPIFPRL 513


>gi|194017985|ref|ZP_03056592.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010322|gb|EDW19897.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 666

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 220/521 (42%), Positives = 332/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + 
Sbjct: 3   EKKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T   ++D    + + +   LDIS DDFIRTTEKRH      +++K+ D+GDIY 
Sbjct: 63  AEEQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTKIIEQVFQKLLDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y D
Sbjct: 123 DQYEGWYSIPDETFYTETQLVDVERNEKGEVTGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P++P++++YVWID
Sbjct: 183 RLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPNNPKHVIYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY  + D    K+WPA++H++GK+I+RFH IYWP  L++ +LPLPK++F+H
Sbjct: 243 ALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K +DG + +  G   E DE + +V  + ++   E M+N     
Sbjct: 363 LANDLGNLLNRTVAMVQKYFDGTLSSYKGPVNEFDEELKAVAEQTVKAYEEAMENLEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V +L+S  ++Y D   PW L K    R    +V+Y   E +R  A+LL  F+ K  
Sbjct: 423 ALSNVWTLISRTNKYIDQTAPWVLAKDETKRKELHSVMYHLAESLRITAVLLTPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            KIF  L + +E  + + S+           +  +P+FPR 
Sbjct: 483 EKIFFQLGIEEEKLKSWDSILSFGAIQQATVQKGEPLFPRL 523


>gi|258510147|ref|YP_003183581.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476873|gb|ACV57192.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 650

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 226/512 (44%), Positives = 324/512 (63%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YPN + HIGHAY  + AD +AR+ RL G DV F TGTDEHG KI + A+
Sbjct: 2   KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K F+D      +D+   LDISYDDFIRTTE RH      +++++  +GDIY   
Sbjct: 62  QAGLEPKAFLDPIIAWIQDLWKKLDISYDDFIRTTEARHERVVEQIFERLLQQGDIYLSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+Y+ + E+  G            VQ++ EE YFFR+S Y D+LL YYE +
Sbjct: 122 YQGWYCTPCESYWAERELVDGK----CPQCGREVQFVREESYFFRMSKYVDRLLQYYEEN 177

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P+ R+ E+I +F++ GL+DL +SR +FDWG+ +P +P++++YVW+DAL NY++  
Sbjct: 178 PGFIEPVSRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAI 237

Query: 243 GYLDNPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GYL +         ++WPAD+HV+GKDI+RFHA+YWP  L++  LPLPKKVF HGF L K
Sbjct: 238 GYLSDDADERVKFERYWPADVHVVGKDIVRFHAVYWPIILMALGLPLPKKVFGHGFFLVK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP+ +++  G DA RYFL+REI  G+DG +  +G+ +R+N DLAN  G
Sbjct: 298 GGKMSKSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R+ +M+ +  DG++P PG+ T+ D ++  + + V  ++ ENM       ALA++ +
Sbjct: 358 NLVHRTAAMLNRFNDGVVPAPGSLTDVDRALRDLAAEVKAKVEENMDQLQFSVALAELWN 417

Query: 420 LVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           LV   ++Y D  +PW+L K    +R +TVLY  VE IR  AIL+Q F+      I +   
Sbjct: 418 LVRAANKYIDDCQPWKLNKEGERERLATVLYHMVEAIRVSAILVQPFMTDAPKAIREQFG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             DE   + S +  L P        +P+FPR 
Sbjct: 478 WGDEAFAWDSAEMGLGPSGQTVAEREPLFPRL 509


>gi|315148087|gb|EFT92103.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 677

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 EKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|300023246|ref|YP_003755857.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525067|gb|ADJ23536.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 520

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 284/510 (55%), Positives = 369/510 (72%), Gaps = 3/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK YI+TAI+YPN  PHIGHAYE I  DV+ARF RLDG DV F TGTDEHG K+ + A+
Sbjct: 2   REKFYITTAISYPNGVPHIGHAYEAIATDVIARFERLDGKDVFFLTGTDEHGLKMKQTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+NS  F +M   L +S DDFIRTTE+RH+D C  LW+++   GDI+K  
Sbjct: 62  REGVTPRELADRNSARFIEMVKTLGLSNDDFIRTTEQRHYDACAELWRRMEKAGDIFKRP 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDE YY + E       ++  A   PV+W EEE YFFRLSAYQDKLL++YE++
Sbjct: 122 YGGWYSVRDETYYKESETEVREGQRFATATGTPVEWNEEETYFFRLSAYQDKLLAHYEAN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP ERRNEV+SFVK GL+DLS+SR T DWGI +PD P ++MYVWIDAL NY+T TG
Sbjct: 182 PDFILPAERRNEVVSFVKMGLEDLSISRTTLDWGIPVPDAPGHVMYVWIDALNNYVTATG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            L +P GS+A +WPA++HVIGKDI+RFHA+YWPAFL+SA LPLPK+VFSHGF+L+KGEK+
Sbjct: 242 LLTDPQGSRAHYWPANVHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFSHGFVLNKGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP ++++  G DALRYF +RE+  G+DG Y  + +  R+NADLAN +GNL  
Sbjct: 302 SKSVGNVVDPFDLVKAYGRDALRYFFLREVMFGQDGNYSAEAIANRINADLANNLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ DG IP PGAF+  D +IL+    + +  R  M  Q I + L  V ++V+E
Sbjct: 362 RSLSMIFKNCDGAIPQPGAFSAEDTAILNATDALYEAARGEMDRQAITKYLDAVWAVVAE 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF A++PW  KK +P R +T+LYVT E +RQ AIL Q  +P+ A K+ D+L V  E 
Sbjct: 422 ANRYFAAEEPWAKKKADPARMATILYVTAECVRQFAILAQPVMPESAAKLLDLLAVPAEA 481

Query: 484 RCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
           R F SL    RLK G  + +    +FPR++
Sbjct: 482 RTFASLGSAGRLKAGTAIPEP-QGVFPRYV 510


>gi|310830112|ref|YP_003962469.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741846|gb|ADO39506.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 648

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 219/514 (42%), Positives = 327/514 (63%), Gaps = 8/514 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+E++  Y++T I YP+   HIGH Y  + AD L RF +L G D  F TGTDEHGQKI K
Sbjct: 2   MEEKKTFYVTTPIYYPSGDLHIGHTYTTVAADTLTRFKKLTGYDAYFLTGTDEHGQKIQK 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT + +VD      +++  +++I+YD FIRTT+  H  T + ++KK+ D+GDIY
Sbjct: 62  AAEEKGVTPQAYVDDVVGRIKELWKLMNINYDQFIRTTDPEHEKTIQQIFKKLYDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ + ++  G           PV+   EE YFF++S Y D+LL Y 
Sbjct: 122 KGKYEGWYCTPCESFWTESQLVDGN----CPDCGRPVEKASEEAYFFKMSKYADRLLKYI 177

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HP+FI P  R+NE+I+   K GL+DL +SR +F WG+ +  DP +++YVWIDAL NY+
Sbjct: 178 EDHPDFIQPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVTFDPGHVVYVWIDALPNYI 237

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GYL++      K+WPA++H++GKDI+RFH IYWP  L++ +LPLP+ V+ HG+IL K
Sbjct: 238 SALGYLNDKPQLMDKYWPANVHLVGKDIIRFHTIYWPIILMALDLPLPEHVYGHGWILLK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS+GNV+DP+E+ E+ GVDALRY ++RE+  G DG Y++D L   +N+DLAN +G
Sbjct: 298 GGKMSKSVGNVVDPVELAEKYGVDALRYHVLREMTYGADGIYNEDLLVSHINSDLANDLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+V+M +K +DG+IP      + D  ++++       + + M      RAL  V  
Sbjct: 358 NLLSRTVAMTVKYFDGVIPAERESGDFDAELIALAEETPGVVEDYMNKLDFSRALEAVWK 417

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LVS  ++Y D  +PW L K      R + V+Y   E +R +++L+ + +P    KI D L
Sbjct: 418 LVSRTNKYIDETQPWVLIKDPEKKARLAMVMYNLTESLRIISVLVSSAMPDTGVKIADEL 477

Query: 478 FVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
            V +E R ++S+    K P  +  +  +PIFPR 
Sbjct: 478 KVPEELRTWESIQSFGKYPDGIQVERCEPIFPRI 511


>gi|323701662|ref|ZP_08113334.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533435|gb|EGB23302.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 514

 Score =  481 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 221/510 (43%), Positives = 320/510 (62%), Gaps = 7/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+ + HIGHAY  + AD +ARF RL G DV F TG+DEHGQKI +AA+
Sbjct: 3   KPTFYITTPIYYPSDKLHIGHAYTTVAADAMARFKRLTGYDVWFLTGSDEHGQKIERAAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T K +VD     F+ +   LD+SY+DFIRTT++RH    + +++++ D+GDIYK  
Sbjct: 63  AKNQTPKEYVDHIVDGFKKLWSRLDVSYNDFIRTTDERHRKVVQQIFQQLYDQGDIYKSE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E ++ + ++ +G            V+ + EE YFFR S Y ++ L + E +
Sbjct: 123 YEGWYCTPCETFFTEYQLVEGK----CPDCQREVEKVREESYFFRQSKYAERWLKFIEEN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P+ RRNE++SFVK GL+DL +SR TFDWGI +P DP++++YVW+DALTNY++  G
Sbjct: 179 PDFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIPVPFDPKHVVYVWVDALTNYISALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    KFWPAD+H++GKDI+RFH I WP  L++ NLPLPKKV  HG++L    K+
Sbjct: 239 YGSEDDSLYRKFWPADIHLVGKDIVRFHTIIWPIMLMALNLPLPKKVIGHGWLLLDSGKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  ++++ GVDA+RYFL+RE+  G DG Y ++ L KR+N DLAN  GNL+S
Sbjct: 299 SKSKGNVVDPHTLVDKYGVDAVRYFLLRELPFGSDGLYSEEALVKRINTDLANDYGNLLS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M+ K  +G++  PG     D  ++ +     + + E M    I  ALA +  LV  
Sbjct: 359 RSATMVQKYQEGVLQAPGPAAGPDAELIDLAINTPKLVAEYMDKSEISNALAAIWQLVGR 418

Query: 424 VDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD- 481
            ++Y +   PW L K   P+R +TVLY   EV+R + I+   F+P L  +++  L +AD 
Sbjct: 419 ANKYLEETAPWSLAKAGQPERLNTVLYNVAEVVRFVTIMASPFMPNLPQRVWPQLGIADK 478

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            E   ++SL     P     +  + +FPR 
Sbjct: 479 PELHTWESLRWGSLPAGTTVQRGEVLFPRI 508


>gi|257867079|ref|ZP_05646732.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873414|ref|ZP_05653067.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257877159|ref|ZP_05656812.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801135|gb|EEV30065.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807578|gb|EEV36400.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257811325|gb|EEV40145.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 668

 Score =  481 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 213/521 (40%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + + + LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEELGVDPQEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGKVIGGKAPSGHEVELVKESSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFI P  R+NE+++   K GL+DL++SR TF WGI +   P++++YVWID
Sbjct: 181 RLVEYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F H
Sbjct: 241 ALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNV+ P  ++E   +DALRY+L+R +  G DG +  +    R+N D
Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D  + +  + V+    E M       
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASKVTPFDSELSTTAANVVGRYHEAMDKMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           AL++V +L+S  ++Y D  +PW L K    RA   +V+    E +R +AILLQ  + +  
Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKEEEKRAELNSVMVHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
             IF  L +A      + L       G  +     PIFPR 
Sbjct: 481 ANIFQQLGLASVAMDLKDLRFGEFPSGTKVVAKGTPIFPRL 521


>gi|116871573|ref|YP_848354.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740451|emb|CAK19571.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 665

 Score =  481 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 343/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++  +GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLAQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +IE  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIERYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  T+ D++++   + V++E  ++M++     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTDFDQTLVDFKNNVVEEYEKSMEHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWTLAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|163760146|ref|ZP_02167229.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282545|gb|EDQ32833.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 514

 Score =  481 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 271/509 (53%), Positives = 363/509 (71%), Gaps = 5/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ YI+T I YPN  PHIGHAY  I  DVLARF RLDG DV F +GTDEHGQK+ + A+ 
Sbjct: 4   ERFYITTPIFYPNGVPHIGHAYTAIATDVLARFQRLDGKDVFFLSGTDEHGQKMQQTAEQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      D+NS  FRDM + LD S DDFIRTTE+RH  + + LWK++   GDIY G Y
Sbjct: 64  EGIKPIALADKNSAVFRDMLERLDCSNDDFIRTTEERHKASVQELWKRMEANGDIYLGKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+R EAY+++ E   G DG       +PV+W+EEE Y+FRLSAY DKLL  +E +P
Sbjct: 124 GGWYSVRQEAYFDEGETTLGEDGIRREPLGSPVEWVEEESYYFRLSAYGDKLLELFEKNP 183

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EF+ P ERRNEV SFVKSGLKDLS+SR TFDWG+ +P + +++MYVW+DALTNY+T  G+
Sbjct: 184 EFVAPAERRNEVASFVKSGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITAAGF 243

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D     K  +WPA +H+IGKDI+RFHA+YWPAFL+SA L LP KVF+HGF+L KGEK+S
Sbjct: 244 PDETS-EKWNYWPA-IHMIGKDIVRFHAVYWPAFLMSAGLELPAKVFAHGFLLVKGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP  +I+  G+D +RYF +RE+  G+DG Y  + +  R+N+DLANGIGNL SR
Sbjct: 302 KSIGNVVDPFALIDHYGLDQVRYFFMREVPFGQDGSYSPEAIATRINSDLANGIGNLTSR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +SMI K+ DG +P  G  T+ D+++L    +V++  R +M +  IH+AL  +I +V++ 
Sbjct: 362 CLSMINKNCDGKVPECGVLTDPDKAMLETADKVIESARADMADFQIHKALTSIIDVVADG 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           DRYF +Q+PW LKKT+P R  TVLY+T E +RQ++ILL  F+P+ A K+ D++    + R
Sbjct: 422 DRYFASQEPWALKKTDPARMETVLYITAETVRQISILLLPFMPQSAGKLLDLVAAPADKR 481

Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            F +L +  RL PG  + K   PIFPR++
Sbjct: 482 DFAALGETGRLAPGTPIDKP-TPIFPRYV 509


>gi|291278499|ref|YP_003495334.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753201|dbj|BAI79578.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 228/516 (44%), Positives = 332/516 (64%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQKI +
Sbjct: 1   MSNK-TFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLCGYDVFFLTGTDEHGQKIEQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G+T K   D     F+ +   L+IS D FIRTT++ H  T + ++KK+ + GDIY
Sbjct: 60  AAQKKGITPKELADTVVERFKSLWVKLNISNDKFIRTTDEEHKKTVQKIFKKMQENGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY    E Y+ + ++    DG +  +       ++E  YFF++S YQ++LL Y 
Sbjct: 120 LGEYEGWYCTPCETYWTETQLL---DGNHCPSCGRETHKLKEPSYFFKMSKYQNELLKYI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + +P+FI P  R+NE++SF+K GLKDLS+SR +F WGI +P D  +++YVWIDALTNY++
Sbjct: 177 QENPDFIQPTSRKNEIVSFIKEGLKDLSVSRVSFKWGIPVPGDENHVIYVWIDALTNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYLD     K K+WPAD+H++GKDILRFH +YWP  L+SA LPLPKKVF+HG+   +G
Sbjct: 237 AIGYLDETKQFK-KYWPADVHLVGKDILRFHTVYWPTMLMSAGLPLPKKVFAHGWWTVEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGN IDP  +++  GVDA+RYFL+RE+  G DG +    L  R+N DLAN +GN
Sbjct: 296 QKMSKSLGNAIDPNWLVDTFGVDAIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R++ M+ + ++G+IP      E+D+ +L+    V  E+  ++ N   ++AL  +  L
Sbjct: 356 LLNRTMGMVKRYFNGIIPEYKVEDETDKELLAKIEEVFDEVDTHLNNIAFNKALISIWQL 415

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VSE+++Y D   PW L K     DR  +VLY+ ++ IR L++L+  F+P+ + +I   L 
Sbjct: 416 VSELNKYIDKNAPWMLAKDESKRDRLESVLYLVLDGIRILSLLIYPFMPQTSEEIRRQLN 475

Query: 479 VADE--NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           +  +     F+ L   ++LKPG  L +    +FPR 
Sbjct: 476 IDIDVFKSDFEDLKKVKQLKPGLKLGEA-KQLFPRI 510


>gi|325568422|ref|ZP_08144789.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158191|gb|EGC70344.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 668

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 213/521 (40%), Positives = 320/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + + + LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEELGVDPQEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKTAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGKVIGGKAPSGHEVELVKESSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFI P  R+NE+++   K GL+DL++SR TF WGI +   P++++YVWID
Sbjct: 181 RLVQYYDEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNV+ P  ++E   +DALRY+L+R +  G DG +  +    R+N D
Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D  + +  + V+    E M       
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASKVTPFDSELSTTAANVVGRYHEAMDKMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           AL++V +L+S  ++Y D  +PW L K    RA   +V+    E +R +AILLQ  + +  
Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKEEEKRAELNSVMVHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
             IF  L +A      + L       G  +     PIFPR 
Sbjct: 481 ANIFQQLGLASVAMDLKDLRFGEFPSGTKVVAKGTPIFPRL 521


>gi|46906409|ref|YP_012798.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|67461803|sp|Q724N6|SYM_LISMF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46879673|gb|AAT02975.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 665

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|154253553|ref|YP_001414377.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157503|gb|ABS64720.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 520

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 268/514 (52%), Positives = 355/514 (69%), Gaps = 4/514 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  YI+TAI+YPN  PHIGHAYE+I  DV+AR+ RLDG DV F TG D+HGQK+A+
Sbjct: 1   MSAPKAFYITTAISYPNGPPHIGHAYEVITTDVIARYKRLDGYDVRFLTGVDDHGQKMAQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +   D+ +  F  M + L+IS DDFIRTTE RH   C+ LW+KI+ KGDIY
Sbjct: 61  TAKAKGTTPQALADEMAPKFLAMDERLNISNDDFIRTTEARHEKACQHLWEKIAAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179
            G YSGWYS+RDEA+Y++DE+  G  GQ        PV+WMEEE YFFRLSAYQ+KLL+ 
Sbjct: 121 TGTYSGWYSVRDEAFYDEDELTTGEGGQKLAPGTGTPVEWMEEETYFFRLSAYQEKLLAL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
           YES P+FI P  RRNE+++FVK GL DLS+SR     DWG+ +P DP ++MYVWIDALTN
Sbjct: 181 YESQPDFIQPASRRNEILAFVKRGLNDLSISRARTKLDWGVGVPGDPNHVMYVWIDALTN 240

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y+T  GY D       ++WPAD+H+IGKDI+RFHA+ WPA L++A + LPK+VF HGF+ 
Sbjct: 241 YITGLGYPDMDGDLFKRYWPADMHIIGKDIVRFHAVIWPAMLMAAEVALPKRVFGHGFLN 300

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +GEK+SKS+GNVIDP  + +  GVD +RYF  RE+  G DG Y  D +  R+NADLAN 
Sbjct: 301 VRGEKMSKSVGNVIDPFTITDTYGVDPIRYFFCREVTYGADGSYSHDTVVNRINADLAND 360

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL  RS+SMI K+  G +P  GAFT  D+++L   + + ++ RE M+   IH  + +V
Sbjct: 361 IGNLAQRSLSMIAKNCGGEVPAYGAFTAEDKAVLDAAAALPEKTREQMERLEIHSYVGEV 420

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            ++VSE +RYF  Q+PW LKKT+P+R  TVLYVT EV+R+ A++LQ  +P    K+ D+L
Sbjct: 421 FAVVSEANRYFAGQEPWALKKTDPERMGTVLYVTAEVVRRCALMLQPVMPASIAKLLDLL 480

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            V +  R F  +   L PG  L      +FPR++
Sbjct: 481 AVPEGARAFSDIAASLTPGTALPAPAG-VFPRYV 513


>gi|254933016|ref|ZP_05266375.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293584575|gb|EFF96607.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328469714|gb|EGF40636.1| methionyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 664

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|15896243|ref|NP_349592.1| methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|25009386|sp|Q97EW5|SYM_CLOAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15026047|gb|AAK80932.1|AE007796_2 Methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510398|gb|ADZ22034.1| methionyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 644

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 217/513 (42%), Positives = 316/513 (61%), Gaps = 8/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+T I YP+A+ HIG+ Y  + +D L RF RL G D    TGTDEHGQKI +
Sbjct: 1   MSEKKKFYITTPIYYPSAKLHIGNTYTTVASDALVRFKRLQGYDAFMLTGTDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+T K +VD+     +D+  +++ISYD FIRTT++ H    + + KK  D GDIY
Sbjct: 61  IAEDKGITPKAYVDEIVAGIKDLWKMMNISYDKFIRTTDEEHVKAVQKIVKKFYDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y GWY    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KSAYEGWYCTPCESFWTETQLVDGK----CPDCGRPVEKTKEEAYFFKMSKYADRLIKYI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HP+FI P  R+NE+++   K GL+DL +SR +FDWGI I  D ++++YVWIDAL+NY+
Sbjct: 177 EDHPDFIQPESRKNEMLNNFLKPGLQDLCISRSSFDWGIPITFDEKHVIYVWIDALSNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + D    KFWPADLH++GKDI+RFH IYWP  L++ +LPLPK+VF HG++L  
Sbjct: 237 TALGYGSDNDELYNKFWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKQVFGHGWLLVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP+ +I E G D +RY+L+ EI  G DG ++ +   K++N+DLAN +G
Sbjct: 297 GGKMSKSKGNVVDPVVLINEFGTDPVRYYLLHEIPFGSDGLFNNEIFIKKINSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ +MI K +DG I  P    E D  ++ +   + +++ E+++   I  AL  +  
Sbjct: 357 NLVSRTAAMIEKYFDGSIQPPVDKEEIDNELIDMAISLPEKLDEDIKKLKIPEALDHIWD 416

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K      R  TVLY  VE +R +A  L  F+P+   KI   L
Sbjct: 417 LIKRANKYIDETTPWVLAKDENKKARLGTVLYNLVESLRFVATTLTPFLPETGEKIKTQL 476

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  +     S     + G  + K  + IFPR 
Sbjct: 477 NIELDTWESLSAFDGTRAGTKVSK-GEVIFPRI 508


>gi|330994631|ref|ZP_08318554.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758272|gb|EGG74793.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 512

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 242/507 (47%), Positives = 334/507 (65%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y++T I Y N  PHIGHAY  + ADV+ARF RL G DV F TGTDEHGQK+ +AAQ 
Sbjct: 3   RRYYVTTPIYYVNGAPHIGHAYTSVAADVIARFKRLAGFDVFFLTGTDEHGQKVEQAAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T   F D+ + +FRDM D + ISYDDFIRTTE RH    + LWKK+ + G IY   Y
Sbjct: 63  AGMTPIAFADRVAADFRDMYDTMAISYDDFIRTTEPRHVQGAQALWKKLEENGHIYLDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY+ RDE +Y ++E+  G DG+        V+W++E  YFF LS + D+LL  YE+ P
Sbjct: 123 EGWYATRDECFYGEEELIDGPDGKKVAPTGAAVEWVKEPSYFFDLSRFGDRLLELYETRP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI P  RRNEVISFVK GL++LS+SR +F WGI +P DP+++MYVW+DAL NYL+  GY
Sbjct: 183 GFIEPASRRNEVISFVKQGLRNLSVSRTSFSWGIPVPGDPKHVMYVWVDALANYLSAVGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D    ++  FWPA+LH++GKDILRFHAIYWPA L++A LPLP +VFSHG+   +G+K+S
Sbjct: 243 PDAGA-ARWGFWPANLHLVGKDILRFHAIYWPALLMAAGLPLPDRVFSHGWWTIEGQKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP +++ E G+D +R+FL+RE+  G D    +  +  R+N +LAN +GNL  R
Sbjct: 302 KSLGNVVDPRDLVTEFGLDPIRFFLMREMPFGGDSDLSRRAIISRMNVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S I ++ DG +P  G  T  D  +L+  S ++Q + E +  Q +  AL +V  L+   
Sbjct: 362 TLSQIARNCDGKLPPQGTHTPEDTKLLAPASLLVQIMHEQIDRQALTDALEEVWKLIRAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW+LKKT+  R   VL V  + +R +A +LQ ++P   +++   L VA+  R
Sbjct: 422 NAYIDHQAPWKLKKTDAARMGDVLRVLADALRIIATVLQPYMPGSMDRMLTQLGVAEGER 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F SLD  L  G  L      IFPR++
Sbjct: 482 TFASLDVPLPAGRALPAP-QGIFPRYV 507


>gi|226222806|ref|YP_002756913.1| methionyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254992034|ref|ZP_05274224.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|225875268|emb|CAS03965.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 664

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|254825910|ref|ZP_05230911.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853705|ref|ZP_05243053.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255519716|ref|ZP_05386953.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764921|ref|ZP_07074910.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258607084|gb|EEW19692.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293595148|gb|EFG02909.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514408|gb|EFK41466.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 664

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWTLAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|218291061|ref|ZP_03495093.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239015|gb|EED06221.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 650

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 227/512 (44%), Positives = 325/512 (63%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I YPN + HIGHAY  + AD +AR+ RL G DV F TGTDEHG KI + A+
Sbjct: 2   KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYDVFFLTGTDEHGLKIQQRAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K F+D      +D+   LDISYDDFIRTTE RH      +++++  +GDIY   
Sbjct: 62  QAGLEPKAFLDPIIAWIQDLWRKLDISYDDFIRTTELRHERVVEQIFERLLQQGDIYLSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+Y+ + E+ +G            VQ++ EE YFFR+S Y D+LL YYE +
Sbjct: 122 YQGWYCTPCESYWAERELVEGK----CPQCGREVQFVREESYFFRMSKYVDRLLQYYEEN 177

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P+ R+ E+I +F++ GL+DL +SR +FDWG+ +P +P++++YVW+DAL NY++  
Sbjct: 178 PGFIEPVSRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAI 237

Query: 243 GYLDNPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           GYL +         ++WPAD+HV+GKDI+RFHA+YWP  L++  LPLPKKVF HGF L K
Sbjct: 238 GYLSDDPNERAKFERYWPADVHVVGKDIVRFHAVYWPIILMALGLPLPKKVFGHGFFLVK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP+ +++  G DA RYFL+REI  G+DG +  +G+ +R+N DLAN  G
Sbjct: 298 GGKMSKSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV R+ +M+ +  DG++PTPG+ T+ D ++  + +    ++ ENM       ALA++ +
Sbjct: 358 NLVHRTAAMLNRFNDGVVPTPGSLTDVDRALRELAAEAKAKVEENMDQLQFSVALAELWN 417

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           LV   ++Y D  +PW+L K    DR +TVLY  VE IR  AIL+Q F+      I +   
Sbjct: 418 LVRAANKYIDDCQPWKLNKEGQRDRLATVLYHMVEAIRVSAILVQPFMTDAPRAIREQFG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             DE   + S +  L P        +P+FPR 
Sbjct: 478 WGDEAFAWDSAEMGLGPSGQKVAEREPLFPRL 509


>gi|295113880|emb|CBL32517.1| methionyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 669

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|16799293|ref|NP_469561.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|25009380|sp|Q92F90|SYM_LISIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16412635|emb|CAC95449.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 664

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWALAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 524


>gi|289433525|ref|YP_003463397.1| Methionyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169769|emb|CBH26305.1| metS [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313639884|gb|EFS04591.1| methionyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 665

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  T   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK +F HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMIFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    R+N DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFIDRMNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   GA T  DE+++   + V+ +  ++M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGAVTPFDETLVDFKNNVVADYEKSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKDEEKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTNVVKKGTPIFPRL 525


>gi|307286738|ref|ZP_07566824.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502216|gb|EFM71500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165210|gb|EFU09227.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 677

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 320/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++  +GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVKQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|29375514|ref|NP_814668.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971380|ref|ZP_05421966.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255973998|ref|ZP_05424584.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617799|ref|ZP_05474645.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761684|ref|ZP_05502264.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854227|ref|ZP_05559591.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256957214|ref|ZP_05561385.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960056|ref|ZP_05564227.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964250|ref|ZP_05568421.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257077814|ref|ZP_05572175.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257083841|ref|ZP_05578202.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257089340|ref|ZP_05583701.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418524|ref|ZP_05595518.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257421174|ref|ZP_05598164.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294780517|ref|ZP_06745880.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300859824|ref|ZP_07105912.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|38258306|sp|Q837B3|SYM_ENTFA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29342974|gb|AAO80738.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962398|gb|EET94874.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255966870|gb|EET97492.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597326|gb|EEU16502.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682935|gb|EEU22630.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256709787|gb|EEU24831.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256947710|gb|EEU64342.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256950552|gb|EEU67184.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954746|gb|EEU71378.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256985844|gb|EEU73146.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256991871|gb|EEU79173.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256998152|gb|EEU84672.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160352|gb|EEU90312.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162998|gb|EEU92958.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294452344|gb|EFG20783.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300850642|gb|EFK78391.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|323480110|gb|ADX79549.1| methionyl-tRNA synthetase/Methionine--tRNA ligase, MetRS
           [Enterococcus faecalis 62]
          Length = 669

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|322804348|emb|CBZ01898.1| methionyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 645

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 215/511 (42%), Positives = 321/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT KV+VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAKKVTPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWDSLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|315032441|gb|EFT44373.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 677

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|157690820|ref|YP_001485282.1| methionyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679578|gb|ABV60722.1| methionine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 666

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 220/521 (42%), Positives = 332/521 (63%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y++T I YP+ + HIGHAY  +  D +AR+ RL G DV++ TGTDEHGQKI + 
Sbjct: 3   EKKKTFYLTTPIYYPSGKLHIGHAYTTVAGDAMARYKRLQGYDVMYLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T   ++D    + + +   LDIS DDFIRTTEKRH      +++K+ D+GDIY 
Sbjct: 63  AEEQNITPIEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTIIIGQVFQKLLDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y D
Sbjct: 123 DQYEGWYSIPDETFYTETQLVDVEHNEKGEVTGGKSPDSGHPVELIKEESYFFRMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE +P FI P  R+NE+I+   K GL+DL++SR TFDWGIK+P++P++++YVWID
Sbjct: 183 RLLDYYEKNPTFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPNNPKHVIYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY  + D    K+WPA++H++GK+I+RFH IYWP  L++ +LPLPK++F+H
Sbjct: 243 ALFNYLTAIGYGTDQDEKYKKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFAH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGADGVFTPEGFVERVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K +DG + +  G   E DE + +V  + ++   E M+N     
Sbjct: 363 LANDLGNLLNRTVAMVQKYFDGTLSSYKGPVNEFDEELKAVAEQTVKAYEEAMENLEFSV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V +L+S  ++Y D   PW L K    R    +V+Y   E +R  A+LL  F+ K  
Sbjct: 423 ALSNVWTLISRTNKYIDQTAPWVLAKDESKRKELHSVMYHLAESLRITAVLLTPFLTKTP 482

Query: 471 NKIFDILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            KIF  L + +E  + + S+           +  +P+FPR 
Sbjct: 483 EKIFFQLGIEEEKLKSWDSILSFGAIQQATVQKGEPLFPRL 523


>gi|120405753|ref|YP_955582.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119958571|gb|ABM15576.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 511

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 255/507 (50%), Positives = 348/507 (68%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTD HG K+A+ A  
Sbjct: 3   EPYYITTAIAYPNGDPHVGHAYEYIATDAVARFKRLDGFDVRFLTGTDVHGLKMAETAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV T      NS  F+ + + L IS+D FIRT++  H++  + +W+++ D GD+Y G Y
Sbjct: 63  LGVPTAELARSNSDVFQRLQEKLHISFDRFIRTSDPDHYEASKAIWRRMVDAGDVYLGKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E    A G     +   PV W EEE YFFRLSAY D+LL+ Y  H
Sbjct: 123 SGWYSVRDERFFTEAETSVDAAGVRIATETGTPVTWTEEETYFFRLSAYADRLLALYADH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV+SFV  GL+DLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 183 PEFIEPEVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D       ++WPADLH++GKDI+RFH +YWPAFL+SA + LPKKVF HGF+L++GEK+
Sbjct: 243 FPDTDSELFTRYWPADLHMVGKDIIRFHTVYWPAFLMSAGIELPKKVFVHGFLLNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYF +RE+  G+DG Y +D +  R+NADLAN  GNL  
Sbjct: 303 SKSVGNVVDPVNLVDTFGLDQVRYFFLREVPFGQDGSYSEDAIIGRINADLANEFGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+ DG++P PGAFT  D  +L+    +L+ +R + +   +H AL  + S++  
Sbjct: 363 RSLSMVAKNLDGVVPQPGAFTAEDSEMLAAADALLERVRRHFEATAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF AQ+PW L+KT+P R +TVLY T+EV+R  A+L Q  +P  A K+ D+L    + 
Sbjct: 423 ANRYFSAQEPWVLRKTDPARFATVLYTTLEVVRIAALLSQPVMPDAAAKLLDLLGQPADR 482

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F ++  RL PG  L      +FPR+
Sbjct: 483 RAFTAIGTRLAPGTALPSP-TGVFPRY 508


>gi|170758335|ref|YP_001785405.1| methionyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405324|gb|ACA53735.1| methionine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 645

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 215/513 (41%), Positives = 323/513 (62%), Gaps = 12/513 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT K +VD+     +D+  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAEKVTPKAYVDEIVAGIKDLWKIMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYNTENDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGADPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ E+M+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEEDMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY  VE +R +++ + AF+P+ + KI   +  
Sbjct: 418 GRANKYIDETTPWVLAKDESKKERLGTVLYNLVESLRIISVCISAFIPETSIKINTQIN- 476

Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             +   + SL +    K G  + K  + IFPR 
Sbjct: 477 -ADILTWDSLSEFNGTKSGTKV-KKGEAIFPRI 507


>gi|227517850|ref|ZP_03947899.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555041|ref|ZP_03985088.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229546775|ref|ZP_04435500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548866|ref|ZP_04437591.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|293383808|ref|ZP_06629715.1| methionine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388716|ref|ZP_06633209.1| methionine--tRNA ligase [Enterococcus faecalis S613]
 gi|307268005|ref|ZP_07549393.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307271930|ref|ZP_07553198.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307275347|ref|ZP_07556490.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307278375|ref|ZP_07559450.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307290946|ref|ZP_07570836.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901528|ref|ZP_07760801.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312904490|ref|ZP_07763649.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312906976|ref|ZP_07765972.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312952803|ref|ZP_07771665.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312978767|ref|ZP_07790494.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|227074693|gb|EEI12656.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227175828|gb|EEI56800.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229305887|gb|EEN71883.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229308124|gb|EEN74111.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|291078884|gb|EFE16248.1| methionine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081873|gb|EFE18836.1| methionine--tRNA ligase [Enterococcus faecalis S613]
 gi|306498016|gb|EFM67543.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306504881|gb|EFM74076.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507981|gb|EFM77108.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306511436|gb|EFM80438.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515646|gb|EFM84173.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310626961|gb|EFQ10244.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629319|gb|EFQ12602.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310632188|gb|EFQ15471.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311288474|gb|EFQ67030.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291323|gb|EFQ69879.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315029800|gb|EFT41732.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315034325|gb|EFT46257.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315145783|gb|EFT89799.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315149690|gb|EFT93706.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153002|gb|EFT97018.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155233|gb|EFT99249.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315157560|gb|EFU01577.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315163011|gb|EFU07028.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315167934|gb|EFU11951.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315172032|gb|EFU16049.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173438|gb|EFU17455.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574157|gb|EFU86348.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315577288|gb|EFU89479.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315581700|gb|EFU93891.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327534510|gb|AEA93344.1| methionine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329574121|gb|EGG55698.1| methionine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 677

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|226947300|ref|YP_002802391.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841497|gb|ACO84163.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 645

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/511 (41%), Positives = 320/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAKKVTPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYNTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWDSLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|257081173|ref|ZP_05575534.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257086267|ref|ZP_05580628.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256989203|gb|EEU76505.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256994297|gb|EEU81599.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 669

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|47096170|ref|ZP_00233769.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284803084|ref|YP_003414949.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996225|ref|YP_003417993.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|47015418|gb|EAL06352.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284058646|gb|ADB69587.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061692|gb|ADB72631.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 665

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 341/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D+ ++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|257415492|ref|ZP_05592486.1| methionyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157320|gb|EEU87280.1| methionyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 669

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQRIFDRLVEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 181 RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 421 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 481 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 521


>gi|168177409|ref|ZP_02612073.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670464|gb|EDT82438.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 645

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/511 (41%), Positives = 320/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAKKVTPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWNSLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|315027115|gb|EFT39047.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 677

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/521 (41%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 9   MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK 68

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT K +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 69  KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY 128

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVY+  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 129 LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 188

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HPEFI P  R+NE+++   K GL+DL++SR TF WGI + +DP++++YVWID
Sbjct: 189 RLVEYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID 248

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPA++ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 249 ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 309 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P      T  D  + +  + V+ +  E M+    + 
Sbjct: 369 LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+A++ +LVS  ++Y D   PW L K    R    +V+    E +R +AILLQ  + +  
Sbjct: 429 AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP 488

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +  E    +++          +     PIFPR 
Sbjct: 489 GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRL 529


>gi|315640002|ref|ZP_07895129.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484264|gb|EFU74733.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 669

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 221/521 (42%), Positives = 324/521 (62%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD+ + + + +   LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KADELGVTPQEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHQKAVKKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGQYEGWYSISDEEYFTETQLAEVYKDEEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL+YY+ HPEFI P  R+NE+I+   K GL+DL++SR T  WGI +  +P++++YVWID
Sbjct: 181 RLLAYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTHSWGIPVDANPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPK+V+ H
Sbjct: 241 ALSNYISALGYGSDDDQLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALGLPLPKEVYGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKEGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVARVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K  DG++PT     T  D  + +  + V+   RE M N     
Sbjct: 361 LANDLGNLLNRTVAMINKYCDGIVPTYRSKVTPFDSELSTTAANVIGRYREAMDNMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA+V +LVS  ++Y D  +PW L K    +A   +V+    E +R +A+LLQ  + +  
Sbjct: 421 ALAEVWTLVSRANKYIDETQPWILAKDEEKKAELDSVMIHLAESLRIVALLLQPVMTETP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            KIF+ L +         L          + +   PIFPR 
Sbjct: 481 AKIFEQLGLKQMATSLTDLRFGEFPAETKVVEKGTPIFPRL 521


>gi|16802223|ref|NP_463708.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500370|ref|ZP_03668719.1| methionyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503503|ref|ZP_03671810.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829268|ref|ZP_05233955.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254832524|ref|ZP_05237179.1| methionyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254901038|ref|ZP_05260962.1| methionyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913894|ref|ZP_05263906.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938315|ref|ZP_05270012.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255026302|ref|ZP_05298288.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|255029121|ref|ZP_05301072.1| methionyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|25009372|sp|Q8YAF2|SYM_LISMO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16409534|emb|CAC98392.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|258601679|gb|EEW15004.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610927|gb|EEW23535.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293591911|gb|EFG00246.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 664

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 341/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D+ ++   + V++E   +M +     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|313621117|gb|EFR92184.1| methionyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 657

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKEEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 525


>gi|296140917|ref|YP_003648160.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296029051|gb|ADG79821.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 516

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 251/512 (49%), Positives = 359/512 (70%), Gaps = 2/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  Y++TAIAYPN  PHIGHAYE I  D +ARF RLDG DV F TGTDEHG K+ +
Sbjct: 1   MAADKAFYVTTAIAYPNGVPHIGHAYEYIATDTIARFKRLDGFDVFFLTGTDEHGLKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+ TK   D+N+  F  +   +  ++D FIRTT+  H+   + +W+K++ +GDIY
Sbjct: 61  AAAKEGIETKALADRNAAAFEALQRAVGSTFDRFIRTTDTDHYAASQAIWEKLAARGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSY 179
              ++GWYS+RDEAYY +DE     DG         PV+W EE  YFFRLSAYQDKLL  
Sbjct: 121 LDTFAGWYSVRDEAYYAEDETALLEDGTRAAISTGTPVEWTEEASYFFRLSAYQDKLLEL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +E++P ++ P  RRNE++SF+K GLKDLS+SR TFDWG+ +P DP ++MYVW+DALTNYL
Sbjct: 181 FETNPGYLEPATRRNEIVSFIKGGLKDLSISRTTFDWGVPVPGDPDHVMYVWVDALTNYL 240

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T +GY D      A++WP  L +IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ +K
Sbjct: 241 TGSGYPDTSSEQFARYWPPRLQMIGKDIIRFHAVYWPAFLMSAGIELPERVFAHGFLFNK 300

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS+GNV+DP ++I   G+DA+R+FL+RE++ G+DG Y  + +  R+NADLAN +G
Sbjct: 301 GEKMSKSVGNVVDPYQLIAAYGLDAVRFFLLREVSFGQDGSYSHEAIVGRINADLANELG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL  RS+SMI K+  G +P PG FT  D ++L+    +L  +R ++  Q +H  L  + +
Sbjct: 361 NLAQRSLSMINKNCAGTVPAPGEFTADDTALLAKADDLLATVRRHVDQQALHLYLESIWA 420

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           ++++ +RYF AQ+PW+LK ++P R +TVLYVT EV+RQ+A+LLQ  +P+   ++  +L  
Sbjct: 421 VLADTNRYFSAQEPWKLKASDPARMATVLYVTAEVVRQVALLLQPVMPESTEELLTLLEQ 480

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             + R F+++  RL+PG  L K    +FPR++
Sbjct: 481 PRDERTFEAVATRLRPGTALPKP-QGVFPRYV 511


>gi|294496909|ref|YP_003560609.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346846|gb|ADE67175.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 660

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 226/518 (43%), Positives = 334/518 (64%), Gaps = 14/518 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+  
Sbjct: 7   TFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEK 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT + +VD      +++ D +DISYDDFIRTTE RH +    ++ ++ ++GDIY   Y 
Sbjct: 67  NVTPQQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYE 126

Query: 126 GWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           GWYS+ DE YY + ++           G       +PV+ + EE YFF++  Y D+LL++
Sbjct: 127 GWYSVPDETYYTEHQLVDPIVENGKVVGGKSPDSGHPVELVREESYFFKMGKYVDRLLAF 186

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P +P++++YVWIDAL+NY
Sbjct: 187 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVIYVWIDALSNY 246

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GY    D S  K+WPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 247 ITSLGYDTENDESYRKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 306

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +R+N DLAN +
Sbjct: 307 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERINFDLANDL 366

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+V+MI K +DG+IPT  G  TE D  I+      + +  E M++     ALA +
Sbjct: 367 GNLVNRTVAMINKYFDGVIPTYEGNVTEFDALIVQAQKDTVNKYEEAMEDMEFSVALASI 426

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS  ++Y D  +PW L K    RA  ++V+    E IR +A+LLQ F+ +   KIF 
Sbjct: 427 WQYVSRTNKYIDETQPWALAKDENKRAELASVMTHLAESIRHIAVLLQPFLTRTPEKIFA 486

Query: 476 ILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            + V ++  + ++S      LK G  + K  +P+FPR 
Sbjct: 487 QIGVKEDVLKTWESTTRFNMLKEGTKVEK-GEPMFPRL 523


>gi|259047680|ref|ZP_05738081.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035871|gb|EEW37126.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 670

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 222/522 (42%), Positives = 329/522 (63%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y++T I YP+   HIGHAY  + +D + R+ +L G D  F TGTDEHGQKI + 
Sbjct: 3   EDKKTFYLTTPIYYPSGNLHIGHAYTTVASDAMVRYKKLQGFDTYFLTGTDEHGQKIQEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGV+   FVD+     +D+   LDISYDDFIRTT+ RH    + +++K+ D GDIY 
Sbjct: 63  AKEAGVSEIEFVDKIIFGIQDLWKELDISYDDFIRTTQPRHTKAVQKIFQKLVDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+ A+G          + V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLVEVYRDAEGNMIGGVAPSGHEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YYE HP+FI P  R+NE+I+   K GL+DL++SR +FDWGI +P+DP++++YVWIDA
Sbjct: 183 LLQYYEEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIPVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    ++WPAD+H IGK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 243 LSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIMLMALDLPLPKKIFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+DALRY+L+RE+  G DG +  +   +R+N DL
Sbjct: 303 WLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLREVPFGSDGIFTPESFVERINYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   A  +  D+ ++     ++ E+ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGTIPAYTAPVSSFDQELVDASKAMIVEVEEAMENMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA +   VS  ++Y D   PW   K     +  +  +    E +R +A+ LQ F+ +   
Sbjct: 423 LAAIWKFVSRTNKYIDETTPWAAVKDEARQEELARTMNYLAESLRIIAVALQPFLTQTPG 482

Query: 472 KIFDILFVADENR-CFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +I   L + D     + SL     +  G  + +   PIFPR 
Sbjct: 483 EILAQLGITDSALMDYPSLHTFGVIPEGTKVVEKGQPIFPRL 524


>gi|326403063|ref|YP_004283144.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325049924|dbj|BAJ80262.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 511

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 234/507 (46%), Positives = 326/507 (64%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI+T I Y N  PHIGHAY  + ADVLARF RLDG DV F TGTDEHGQK+   A+ 
Sbjct: 3   RKFYITTPIYYVNGAPHIGHAYTSVAADVLARFKRLDGFDVHFLTGTDEHGQKVEATARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + F D+ +  FR MA  ++IS DDFIRTTE RH  +C+ +W+ I   G I  G Y
Sbjct: 63  NNIAPQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++RDEA+Y++ E+  GADG   +    PV+W+ E  YFF+LS +QD+LL  YE +P
Sbjct: 123 EGWYAVRDEAFYDESELVTGADGIKRSPFGAPVEWVREPSYFFKLSTFQDRLLKLYEDNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI P   RNEV+SFV+SGL+D+S+SR +F WGI +P  P ++MYVWIDALTNYLT  GY
Sbjct: 183 EFIQPASSRNEVLSFVRSGLRDISISRTSFKWGIPVPGAPDHVMYVWIDALTNYLTACGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       K+WPADLH++GK+I RFHA+YWPA L++A LP+P+++F++G+   +GEK+S
Sbjct: 243 PDMDAPL-MKYWPADLHLVGKEITRFHAVYWPAMLMAAGLPVPRRIFANGWWTIEGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL N +    +I E G+D LR+ L+RE+  G DG + +  +  R+N +LAN +GNL  R
Sbjct: 302 KSLNNALAVEPLIAEFGLDQLRFCLLREMPFGNDGNFSRRSVITRINVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S I K+  G++P  G   E+D ++ ++   +   +R+ M       A+ +V  LV   
Sbjct: 362 TLSFIAKNAGGVVPEAGPAAEADHALRAIADGLPDRMRDAMDRLAYQEAIEEVWKLVRAA 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW L+KT+P R  TVL    E +R + ILLQ F+P+   K+ D L +  + R
Sbjct: 422 NAYIDHQAPWALRKTDPQRMLTVLRTLCEALRVVGILLQPFMPEAMAKLLDQLALPADRR 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F SL   L  G +L      +FPR +
Sbjct: 482 GFASLATPLDAGAVLP-PPSGLFPRIV 507


>gi|255659102|ref|ZP_05404511.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848546|gb|EEX68553.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 650

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 221/516 (42%), Positives = 332/516 (64%), Gaps = 11/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+A+ HIGHAY   IAD +ARFHRL G DV F TG+DEHGQKI +
Sbjct: 1   MTEKKPFYITTPIYYPSAKLHIGHAYCTTIADSIARFHRLIGDDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT   +VD+    F+++   L IS DDFIRTT+KRH    + ++ +I  KGDIY
Sbjct: 61  KAEEAGVTPIEYVDKIVAGFQNLWKRLHISNDDFIRTTQKRHERVVQEIFNRIYAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+ + ++    +       H PVQ + EE YFF++S Y D++L Y 
Sbjct: 121 KGAYKGLYCTPCESYWTEHQLD---ENGCCPDCHRPVQEVSEEAYFFKMSKYADRVLQYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E HP+FI P+ RRNE+I+F+K GL DL +SR +F+WGI +P DP++++YVW DALTNYLT
Sbjct: 178 EDHPDFIQPVSRRNEMINFIKQGLDDLCISRTSFNWGIPVPIDPKHVIYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+LD P+    K+WPADLH++GK+I+RFH I WP  L++ +LPLPKKV+ HG+++  G
Sbjct: 238 PIGFLDAPE-KFHKYWPADLHLVGKEIVRFHTIIWPCILMALDLPLPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+DP  +I+E G DA+RYFL+REI  G+DG + +D L +R+N+DLAN +GN
Sbjct: 297 DKMSKSKGNVVDPNGLIDEFGADAIRYFLLREINLGQDGNFSRDALIQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R+++M +K  +G++  P   +E D+S+ +     +    +NM++  +   + +V + 
Sbjct: 357 LLHRTLNMTIKFQNGVLLAPQGESEVDKSLKADAKETVDFFEKNMKDMQLSATIKKVWAF 416

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D   PW L K        + V+Y   E +R +++L+  F+P  A +I+  L 
Sbjct: 417 ISRANKYIDETTPWALAKDPAKKQELANVMYNLAESLRIISVLISPFMPVTAERIWKQLN 476

Query: 479 VADENRCFQ----SLDQRLKPGFMLHKTFDPIFPRF 510
           +    +  Q         +  G  + +  + +FPR 
Sbjct: 477 LPQAFKDVQIEDIESWGGVPAGLKVGEP-EQLFPRI 511


>gi|148259982|ref|YP_001234109.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401663|gb|ABQ30190.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 511

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 234/507 (46%), Positives = 326/507 (64%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI+T I Y N  PHIGHAY  + ADVLARF RLDG DV F TGTDEHGQK+   A+ 
Sbjct: 3   RKFYITTPIYYVNGAPHIGHAYTSVAADVLARFKRLDGFDVHFLTGTDEHGQKVEATARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + F D+ +  FR MA  ++IS DDFIRTTE RH  +C+ +W+ I   G I  G Y
Sbjct: 63  NNIAPQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++RDEA+Y++ E+  GADG   +    PV+W+ E  YFF+LS +QD+LL  YE +P
Sbjct: 123 EGWYAVRDEAFYDESELVTGADGIKRSPFGAPVEWVREPSYFFKLSMFQDRLLKLYEDNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI P   RNEV+SFV+SGL+D+S+SR +F WGI +P  P ++MYVWIDALTNYLT  GY
Sbjct: 183 EFIQPASSRNEVLSFVRSGLRDISISRTSFKWGIPVPGAPDHVMYVWIDALTNYLTACGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       K+WPADLH++GK+I RFHA+YWPA L++A LP+P+++F++G+   +GEK+S
Sbjct: 243 PDMDAPL-MKYWPADLHLVGKEITRFHAVYWPAMLMAAGLPVPRRIFANGWWTIEGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL N +    +I E G+D LR+ L+RE+  G DG + +  +  R+N +LAN +GNL  R
Sbjct: 302 KSLNNALAVEPLIAEFGLDQLRFCLLREMPFGNDGNFSRRSVITRINVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S I K+  G++P  G   E+D ++ ++   +   +R+ M       A+ +V  LV   
Sbjct: 362 TLSFIAKNAGGVVPEAGPAAEADHALRAIADGLPDRMRDAMDRLAYQEAIEEVWKLVRAA 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW L+KT+P R  TVL    E +R + ILLQ F+P+   K+ D L +  + R
Sbjct: 422 NAYIDHQAPWALRKTDPQRMLTVLRTLCEALRVVGILLQPFMPEAMAKLLDQLALPADRR 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F SL   L  G +L      +FPR +
Sbjct: 482 GFASLATPLDAGAVLP-PPSGLFPRIV 507


>gi|168182315|ref|ZP_02616979.1| methionine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793393|ref|YP_002860945.1| methionyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674668|gb|EDT86629.1| methionine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262065|gb|ACQ53098.1| methionine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 645

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 214/511 (41%), Positives = 320/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAKKVTPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCISRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWDGLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|313625533|gb|EFR95248.1| methionyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 655

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 230/522 (44%), Positives = 342/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAPWALAKDEDKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPEGTTVVKKGTPIFPRL 525


>gi|326789740|ref|YP_004307561.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540504|gb|ADZ82363.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 658

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 211/513 (41%), Positives = 320/513 (62%), Gaps = 10/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIGH+Y  + AD +AR+ RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKPTYYITTPIYYPSNKLHIGHSYTTVAADAMARYKRLRGYDVMFLTGTDEHGQKIERRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT + FVD      +D+   +DISYD FIRTT+K H +T + ++KK+ DKGDIYK 
Sbjct: 62  AEDGVTPQAFVDHIVDWIKDLWKTMDISYDKFIRTTDKEHEETVQKIFKKLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PV+ ++EE YFF+LSAYQD+L+ + E 
Sbjct: 122 EYEGLYCTPCESFFTEHQLVDGK----CPDCGRPVEKVKEESYFFKLSAYQDRLIKHIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+++   + GL+DL +SR +F WGI +  DP +++YVW+DAL+NY++ 
Sbjct: 178 NPDFIQPNTRQNEMLNNFLRPGLEDLCVSRTSFKWGIPVEFDPGHVVYVWLDALSNYISA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL   D +  +FWPAD+H++GK+I+RFH I WPA L++ +LPLPK++F HG+++  G 
Sbjct: 238 LGYLQADDANFKRFWPADVHLVGKEIVRFHTIIWPAMLMAMDLPLPKQIFGHGWLVINGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS G V+DP  ++   G DA+RYFL+REIA G+DG +  + L  R+N+DLAN +GNL
Sbjct: 298 KMSKSQGTVVDPSVLVGRYGSDAIRYFLLREIAFGQDGNFSNEALISRINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR+V+MI K +  + P      E D  +  V    + ++  NM+    + AL  +  ++
Sbjct: 358 TSRTVAMIEKYFGTL-PEVQEGNEFDVDVQKVVKEQIAKMESNMEKLFFNNALEDIWVII 416

Query: 422 SEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF- 478
             +++Y D   PW L K      + + VLY   EVIR ++I+++ F+P+   KI+     
Sbjct: 417 RRMNKYIDETMPWVLAKDEANHAKLAGVLYTLSEVIRIVSIMIEPFMPQTPEKIWAQFGI 476

Query: 479 VADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
           V  E   + S+ Q    P  +  K  + +FPR 
Sbjct: 477 VRGELTAWDSIHQFGALPRTVAAKKGENMFPRI 509


>gi|295702276|ref|YP_003595351.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799935|gb|ADF37001.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 660

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 225/518 (43%), Positives = 335/518 (64%), Gaps = 14/518 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+  
Sbjct: 7   TFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLRGFDVRYLTGTDEHGQKIQRKAEEK 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT + +VD      +++ D +DISYDDFIRTTE RH +    ++ ++ ++GDIY   Y 
Sbjct: 67  NVTPQQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYE 126

Query: 126 GWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           GWYS+ DE YY + ++           G       +PV+ + EE YFF++  Y D+LL++
Sbjct: 127 GWYSVPDETYYTEHQLVDPIVENGKVVGGKSPDSGHPVELVREESYFFKMGKYVDRLLAF 186

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           YE +P FI P  R+NE+I+   K GL+DL++SR TFDWG+K+P +P++++YVWIDAL+NY
Sbjct: 187 YEENPSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGNPKHVIYVWIDALSNY 246

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GY    D +  K+WPA++H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG++L 
Sbjct: 247 ITSLGYGTENDENYRKYWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLM 306

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +R+N DLAN +
Sbjct: 307 KDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERINFDLANDL 366

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+V+MI K +DG+IPT  G  TE D  I+      + +  E M++     ALA +
Sbjct: 367 GNLVNRTVAMINKYFDGVIPTYEGNVTEFDALIVQAQKDTVNKYEEAMEDMEFSVALASI 426

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS +++Y D  +PW L K    RA  ++V+    E IR +A+LLQ F+ +   KIF 
Sbjct: 427 WQYVSRMNKYIDETQPWALAKDENKRAELASVMTHLAESIRHIAVLLQPFLTRTPEKIFA 486

Query: 476 ILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            + V ++  + ++S      LK G  + K  +P+FPR 
Sbjct: 487 QIGVKEDVLKTWESTTRFNMLKEGTKVEK-GEPMFPRL 523


>gi|229003043|ref|ZP_04160900.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758201|gb|EEM07389.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 627

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 224/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI K 
Sbjct: 3   EENKTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYDVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT++ +VD      +++ + +DISYDDFIRTTE RH +    ++K++ D+GDIY 
Sbjct: 63  AEELQVTSQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHAVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWGI++P +P++++YVW+DA
Sbjct: 183 LLQFYEENPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTDNEEKYKKYWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKENVTEFDETLVTFAQDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +  LVS  ++Y D  +PW L K   + D+ ++V+    E++RQ+ I+L  F+    +
Sbjct: 423 LSSIWQLVSRTNKYIDETQPWVLAKDENDRDKLASVMAHLAEMLRQMGIMLMPFLTATPS 482

Query: 472 KIFDILFVADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           KIF  L + DE  + + SL     +     + K   PIFPR 
Sbjct: 483 KIFTQLGLTDEAYQSWDSLSTIGCIPASTKVVK-GQPIFPRL 523


>gi|288958659|ref|YP_003449000.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910967|dbj|BAI72456.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 519

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 256/513 (49%), Positives = 349/513 (68%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  Y++T I Y N  PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K
Sbjct: 4   MAGPKTFYLTTPIYYVNDVPHIGHAYTTLACDVLARFMRLDGYDVKFLTGTDEHGQKVEK 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AG+  + F D+ SRNFRD+  +++ S DDFIRTTE RH  + + LW  + D+G+IY
Sbjct: 64  SAEKAGIAPQDFTDRVSRNFRDLVSLMNYSNDDFIRTTEPRHVKSVQALWTLLKDRGEIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+GWYS+RDEA+Y +DE+    +G+         +W+EE  YFF+LSA+QD+L+ +Y
Sbjct: 124 LGSYAGWYSVRDEAFYGEDELTTNPEGKKIAPTGAECEWVEEPSYFFKLSAWQDRLIEFY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  +RNEV++FVKSGLKDLS+SR TF WGI +P D  +IMYVW+DAL NY+T
Sbjct: 184 ERNPDFIAPAGKRNEVMAFVKSGLKDLSVSRTTFKWGIPVPGDDAHIMYVWLDALANYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D      AK+WPADLH++GKDILRFHA+YWPAFL++A L  PK+VF+HG+   +G
Sbjct: 244 AVGYPDTTG-DYAKYWPADLHMVGKDILRFHAVYWPAFLMAAGLQPPKRVFAHGWWTIEG 302

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGNVI P  ++   G+D  RYFL+RE+  G DG +    +  R+N +LAN  GN
Sbjct: 303 QKMSKSLGNVIAPETLVTTYGLDQTRYFLLREVPFGNDGDFSHKQMVNRINGNLANDYGN 362

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R +SMI K+    +PTPGAFTE+D+++L     +L  +R  ++ Q  H+AL  + ++
Sbjct: 363 LVQRVLSMIGKNCAAAVPTPGAFTEADQALLGPAYGLLDVVRAEIRAQAFHKALDAIWAV 422

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V + +RY D Q PW LKKT+P R +TVLYV  E IR LAIL Q  +P  + +I D+L + 
Sbjct: 423 VGDANRYVDEQAPWALKKTDPARMATVLYVLAETIRHLAILTQPVMPDASARILDLLALG 482

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
            + R F +L     L  G  L  T   +FPR++
Sbjct: 483 PDARGFGTLGPSGALVAGTPLP-TPQGVFPRYV 514


>gi|153938113|ref|YP_001389440.1| methionyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934009|gb|ABS39507.1| methionine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317546|gb|ADF97923.1| methionine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 645

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 211/511 (41%), Positives = 318/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT K +VD+     +++  +++I YD FIRTT++ H +  + ++K + + GDIYK 
Sbjct: 62  EAKKVTPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYENGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDDKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ E+M+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEESMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K      R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKGRLGTVLYNLAESLRIISVCISAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWDSLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|313635219|gb|EFS01522.1| methionyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 665

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 228/522 (43%), Positives = 340/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  T   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKLTVEKIFEQLLEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPSNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK +F HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMIFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    R+N DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFIDRMNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +   IP   GA T  DE+++   + V+ +  ++M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFXXXIPAYQGAVTPFDETLVDFKNNVVADYEKSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    R   ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLVSRTNKYIDETAPWALAKDEEKRTELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTNVVKKGTPIFPRL 525


>gi|144899823|emb|CAM76687.1| Methionyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 518

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 249/511 (48%), Positives = 341/511 (66%), Gaps = 4/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K+A
Sbjct: 4   SKKTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVKFLTGTDEHGQKVEKSA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG++ +   D NS NFR++A  L+ S DDFIRTTE RH  + + LW K+   GDIY G
Sbjct: 64  ETAGISPQALADMNSANFRELAARLNCSNDDFIRTTEPRHVASVQALWNKLVQSGDIYLG 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWYS+RDEA+Y +DE+  G +G        PV+W++E  YFFRLSA+QDKLL +YE 
Sbjct: 124 HYEGWYSVRDEAFYGEDELVAGPNGGKLAPTGAPVEWVKEPSYFFRLSAWQDKLLQWYED 183

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+ + P  RRNEV+SFVK GL+DLS+SR +F WGI +P D  ++MYVW+DALTNY+T  
Sbjct: 184 NPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDADHVMYVWLDALTNYITAV 243

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY +      A++WPADLH++GKDI+RFHA+YWPAFL++A +    +VF+HG+  ++G+K
Sbjct: 244 GYPEQDG-DYARYWPADLHMVGKDIVRFHAVYWPAFLMAAGIKPATRVFAHGWWTNEGQK 302

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKS+GNVIDP+ +IE+ G+D +RYFL+RE+  G DG Y    +  R+N++LAN  GNL 
Sbjct: 303 ISKSVGNVIDPLGLIEKYGLDQVRYFLLREVPFGNDGDYSHRAMVMRMNSELANDYGNLA 362

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R +SM+ K+    +P  G F + D  +L     +L ++R+ M  QL H  L  +  ++ 
Sbjct: 363 QRVLSMVGKNCGNAVPVHGDFNDDDREMLDAAHGLLHKLRDAMDRQLFHEGLEALWVVIR 422

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             + Y D Q PW LKKT+P R  TVL+V  E IR LA+L QAF+P  + K+ D L +A +
Sbjct: 423 AANGYVDRQAPWALKKTDPARMGTVLWVLAETIRNLALLTQAFMPDSSAKLLDQLAIAAD 482

Query: 483 NRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
            R          LKPG  L      +FPRF+
Sbjct: 483 QRGLAQCGSHHALKPGTPLP-VPQGVFPRFV 512


>gi|27352779|dbj|BAC49781.1| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 658

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 260/507 (51%), Positives = 357/507 (70%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ + AQN G
Sbjct: 150 FYITTAIAYPNGNPHIGHAYEAIATDTLARFARLDGKDVFFLTGTDEHGLKMIQTAQNEG 209

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T      +N+  F+ M + L++S+D FIRTTE++HH + + +W+++   GDIY   Y+G
Sbjct: 210 LTPSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 269

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE     DG     Q  PV+W+EE+ YFFRLSAYQ+KLL  Y  +P+F
Sbjct: 270 WYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRLSAYQEKLLKLYTDNPDF 329

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNY+T  G+  
Sbjct: 330 IGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMYVWVDALTNYITGVGF-P 388

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +      ++WPAD+H+IGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ ++GEK+SKS
Sbjct: 389 DESDKNWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKS 448

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  + ++ GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN +GNL  RS+
Sbjct: 449 VGNVVDPFNLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 508

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K   G++P PG F+++D++IL++   ++   RE M  Q IH  L  V ++V+E +R
Sbjct: 509 SMIAKQLGGVLPEPGEFSDNDKAILAMADGMIAASREAMATQQIHHWLNAVWAVVAEANR 568

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  +  + D L V    R F
Sbjct: 569 YFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPTASGLLLDSLGVPGGERNF 628

Query: 487 QSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            +L    R+ PG  L     P FPR++
Sbjct: 629 AALGGAKRIAPGSTLPAP-TPAFPRYI 654


>gi|148378083|ref|YP_001252624.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931420|ref|YP_001382482.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936823|ref|YP_001386034.1| methionyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148287567|emb|CAL81631.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927464|gb|ABS32964.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932737|gb|ABS38236.1| methionine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 645

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 214/511 (41%), Positives = 320/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT KV+VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAKKVTPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G            V+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRSVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCISAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWDSLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|260459472|ref|ZP_05807727.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259035026|gb|EEW36282.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 517

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 280/511 (54%), Positives = 367/511 (71%), Gaps = 4/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+  YI+TAI+YPN +PHIGHAYE+I  D LARF RLDG  V F TGTDEHG K+ + A
Sbjct: 2   SRDTFYITTAISYPNGKPHIGHAYEVIATDALARFQRLDGKQVFFLTGTDEHGIKMLQTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G++ +   D+NS +F+ MA  L+ S DDFIRTTE+RH+ + + +WK +   GDIYKG
Sbjct: 62  KREGISARELADRNSADFKRMAAALNASNDDFIRTTEERHYASSQAIWKAMDANGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+RDEAYY ++E    AD   Y  Q  PV+W+EEE YFFRLSAYQDKL++ YES
Sbjct: 122 GYAGWYSVRDEAYYGEEETEVRADNVRYGPQGTPVEWVEEESYFFRLSAYQDKLIALYES 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+FI P ERRNEV+SFVKSGLKDLS+SR TFDWG+ +P D +++MYVW+DALTNY+T  
Sbjct: 182 QPDFIGPAERRNEVMSFVKSGLKDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITGV 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D  D  K +FWPAD H+IGKDI+RFHA+YWPAFL+SA +PLPK+VF HGF+ ++GEK
Sbjct: 242 GYPDEKD-EKWRFWPADAHIIGKDIVRFHAVYWPAFLMSAGIPLPKRVFGHGFLFNRGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNVIDP  ++E  G+D +RYF +RE+  G+DG Y  + +  R NADLANG+GNL 
Sbjct: 301 MSKSVGNVIDPFTMVEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANGLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+  G++P  G  TE+D +IL      L   R+ M  Q IH ALA +  +V+
Sbjct: 361 QRSLSMIAKNCGGVVPKRGDLTEADSAILDQAVAALATARKAMAGQGIHLALAAIFDVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E DRYF  Q PW LKKT+P+R  TVL+ T EV+R++ +L Q FVP  A K+ D+L V  +
Sbjct: 421 EADRYFAGQAPWALKKTDPERMETVLWTTAEVVRRVTVLCQPFVPGSAAKLLDLLAVPAD 480

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            R F+ +  D  L PG  L    + +FPR++
Sbjct: 481 KRDFEHVHADHALVPGTALP-VPEGVFPRYV 510


>gi|187777332|ref|ZP_02993805.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
           15579]
 gi|187774260|gb|EDU38062.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
           15579]
          Length = 645

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 215/511 (42%), Positives = 321/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K +VD+     +D+  +++I YD FIRTT+  H +  + ++K + DKGDIYK 
Sbjct: 62  EAKGVTPKAYVDEIVAGIKDLWKMMNIDYDKFIRTTDDYHVELVQKIFKTLCDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++ +G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYEGWYCTPCESFWTETQLVEGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+I+   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPDFIQPESRKNEMINNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    ++WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYNTEKDELYKRYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM+   I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPEGNCKEDIDEDLIKLALETPRKVEENMEKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY  VE +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLVESLRIISVCISAFIPETSIKINEQINT 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DILNWDSLSEFNGTKVGTKV-KKGEAIFPRI 507


>gi|299820707|ref|ZP_07052596.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817728|gb|EFI84963.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 663

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 229/522 (43%), Positives = 340/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   KEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT++RH    + +++++ ++GDIY 
Sbjct: 63  AKEQGISEQQYVDEVAEGFQELWKKLEISNTDFIRTTQERHKTGVQAIFERLVEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+   G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLAEVYRDEAGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +F HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVHIVGKEIIRFHTIYWPIILMALDLPLPKMIFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  T  D+++ +    V +E  +NM++     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGDVTPFDDALRTFKDDVAKEYEKNMEHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L ++ SL+S  ++Y D  +PW L K        ++V+    E +R +AILLQ F+ +   
Sbjct: 423 LTKLWSLISRTNKYIDETEPWALAKDESRKKELASVMTHLAESLRTIAILLQPFLTRAPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L +  EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFMQLGLQAENLKKWDSIYTFGAIPDGTKVVKKGTPIFPRL 524


>gi|145222520|ref|YP_001133198.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315442968|ref|YP_004075847.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215006|gb|ABP44410.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261271|gb|ADT98012.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 514

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 253/507 (49%), Positives = 349/507 (68%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAIAYPN  PH+GHAYE I  D +ARF RLDG DV F TGTD HG K+A+ A  
Sbjct: 3   QPYYVTTAIAYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDVHGLKMAETAAR 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV T      NS  F+ + + L++S+D FIRT++  H++  + +W ++ D GD+Y   Y
Sbjct: 63  LGVPTAELARSNSDVFQRLQEKLNVSFDRFIRTSDADHYEASKAIWTRMVDAGDVYLDKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E   GADG     +   PV W EEE YFFRLSAY D+LL+ Y   
Sbjct: 123 SGWYSVRDERFFTEAETSIGADGVRIATETGTPVTWTEEETYFFRLSAYTDRLLALYAER 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE++SFV  GL+DLS+SR TFDWG+ +P  P ++MYVW+DALTNYLT  G
Sbjct: 183 PDFIEPEVRRNEIVSFVSGGLRDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D    +  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LPKKVF+HGF+ ++GEK+
Sbjct: 243 FPDTDSETFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPKKVFAHGFLFNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP +++E  GVD LRYFL+RE++ G+DG Y +DG+  R+NADLAN  GNL  
Sbjct: 303 SKSVGNVVDPNDLVETFGVDQLRYFLLREVSFGQDGSYSEDGIIARINADLANEFGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+ DG +P PG FT  D ++L+    +L  +RE+     +H AL  + S++  
Sbjct: 363 RSLSMVAKNLDGAVPEPGEFTAEDTAMLAAADDLLDRVREHYDATAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF AQ+PW L+KT+P R +TVLY T+EV+R  A+L Q  +P     + D+L   ++ 
Sbjct: 423 ANRYFSAQEPWVLRKTDPGRFATVLYTTLEVVRIAALLSQPVMPGTMATLLDLLGQPEDR 482

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R F ++  RL PG  L      +FPR+
Sbjct: 483 RAFSAITVRLTPGTALPAP-TGVFPRY 508


>gi|110803560|ref|YP_699780.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684061|gb|ABG87431.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 645

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 207/512 (40%), Positives = 314/512 (61%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI D L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINDQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|228963136|ref|ZP_04124306.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796521|gb|EEM43959.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 563

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 223/522 (42%), Positives = 341/522 (65%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNITPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDK 175
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y D+
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL +YE +P FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DA
Sbjct: 183 LLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    +    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 243 LSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP      TE DE++++     L+++ E M+N     A
Sbjct: 363 ANDLGNLLNRTVAMIDKYFNGEIPAFKANVTEFDETLVTFAKDTLKKVEEAMENMEFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LVS  ++Y D  +PW L K   + ++ ++V+    EV+RQ  I+L  F+    +
Sbjct: 423 LGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482

Query: 472 KIFDILFVADE-NRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           K+F  L + DE ++ ++SL     +  G  + K  +PIFPR 
Sbjct: 483 KMFAQLGLTDEAHKSWESLSTIGCIPAGTKVEK-GNPIFPRL 523


>gi|255022653|ref|ZP_05294639.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 619

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 231/522 (44%), Positives = 344/522 (65%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +E+YK  +G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEIYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 183 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 243 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 303 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IP   G  TE D++++   + V++E   +M++     A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVVKEYEASMEHMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 423 LNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 482

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 483 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 524


>gi|295694735|ref|YP_003587973.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410337|gb|ADG04829.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 684

 Score =  475 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 221/516 (42%), Positives = 320/516 (62%), Gaps = 13/516 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+  YI+T I YP+ + HIGHAY  + AD +AR+ RL G DV++ TGTDEHGQKI + A
Sbjct: 2   GRKTFYITTPIYYPSNKLHIGHAYTTVAADAMARYKRLRGYDVMYLTGTDEHGQKIERRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G T + FVD+     +++   LDISYDDFIRTTE RH    + +++++ ++GDIY+ 
Sbjct: 62  REEGKTPQAFVDEIVGWIQELWRKLDISYDDFIRTTEPRHKKAVQRIFQRLMEQGDIYQA 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++   +    A+G        PV+ + E+ YFFR+S Y  +LL YYE 
Sbjct: 122 DYEGLYCTPCESFWTARQ----AEGGRCPDCGRPVELVREKSYFFRMSKYVPQLLRYYEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFI P  R++E+I+   K GL+DL +SR TFDWGI +P DP +++YVWIDAL+NY+T 
Sbjct: 178 NPEFIQPESRKHEMINNFIKPGLEDLCVSRTTFDWGIPVPGDPDHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GYL +    + K   +WPAD+ V+GK+I+RFH IYWP  L++  LPLPKKVF HG++L 
Sbjct: 238 LGYLSDDPAEREKFDRYWPADVQVVGKEIVRFHTIYWPIMLIALGLPLPKKVFGHGWLLT 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVIDP  +++  G DA+RYFL+REI  G DG +  + L +R+N DLAN +
Sbjct: 298 PQGKMSKSKGNVIDPNLLLDRYGSDAIRYFLLREIPFGADGVFTPEALIQRLNFDLANDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R++ +I +   G IPTP    + D  + S+ +  +  + E M+      ALA + 
Sbjct: 358 GNLLNRTLPLIERFAGGRIPTPTMVQDPDGELRSLAAETVSRVEEAMEKMEFSTALAAIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L+   ++Y D   PW   K    +RA TVLY   EVIR ++ILLQ F+ K   ++   L
Sbjct: 418 QLLGRANKYIDETAPWAEMKAGRTERAHTVLYHLAEVIRIVSILLQPFLTKAPVEMQRRL 477

Query: 478 FV---ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +      +     +   L PG  ++K  DP+FPR 
Sbjct: 478 GLSPGPHTHWDSARMFGTLPPGLPVYK-GDPLFPRL 512


>gi|300853381|ref|YP_003778365.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433496|gb|ADK13263.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 644

 Score =  475 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 208/511 (40%), Positives = 318/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIG+ Y  + AD LARF RL G DV+  TGTDEHGQKI + A
Sbjct: 2   TKKTYYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGYDVMLLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT   +VD+     + + D+++ISYD FIRTTE  H    + ++KK+ D+GDIYKG
Sbjct: 62  EAKGVTPIEYVDEIVAGIKKLWDMMNISYDKFIRTTEDYHVKAVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + +   G           PV+  +EE YFF++S Y  KL+ Y E 
Sbjct: 122 SYEGLYCTPCESFWTETQAADGK----CPDCGRPVEKTKEEAYFFKMSKYAPKLIKYIED 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++   + GL+DL +SR +F+WGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFNWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    +    K+WPAD+H++GKDILRFH IYWP  L++  LP+PKKVF HG++L  G 
Sbjct: 238 LGYGSKNEELYNKYWPADVHLVGKDILRFHTIYWPIMLMALGLPVPKKVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +++  G DA+RY+L+REI  G DG ++ +   KR+NADLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVDNFGADAVRYYLLREIPFGSDGLFNNEIFIKRINADLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+ +M+ K +DG++  P    + D+ ++ +     +++ +NM +  I  AL  +  L+
Sbjct: 358 LSRTCAMVEKYFDGVVQEPTKKEQIDDELIKLALETPEKVEKNMNDLRIPEALDNIWDLI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +  ++Y D   PW L K     DR  TVLY  +E +R ++I +  ++P+ + K++  L  
Sbjct: 418 TRSNKYIDETTPWILAKDESKKDRLGTVLYNLLESLRIISICVSPYLPETSAKMYKQLNT 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              +    +     K G  + K  + +FPR 
Sbjct: 478 NVVSWDSITSFNGTKAGTKISK-GELLFPRI 507


>gi|54026880|ref|YP_121122.1| methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54018388|dbj|BAD59758.1| putative methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 518

 Score =  475 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 263/514 (51%), Positives = 356/514 (69%), Gaps = 8/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    Y++TAIAYPN  PHIGHAYE I AD +ARF RLDG DV F TGTDEHGQK+ +AA
Sbjct: 4   DAPAFYVTTAIAYPNGAPHIGHAYEYISADAIARFKRLDGYDVFFMTGTDEHGQKMQQAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +    +NS  F  +   LD+SYD FIRTT+  H      +W+++   GDIY  
Sbjct: 64  AAEGIPVQDLAARNSDVFERLDKALDVSYDRFIRTTDADHRAASVAIWERMLANGDIYLD 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y+GWYS+RDEA+Y ++E     DG   + +   PV W EE  +FFRLS YQD+LL++YE
Sbjct: 124 NYAGWYSVRDEAFYTEEETTLLEDGSRISTETKTPVTWTEESNFFFRLSKYQDRLLAHYE 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++S+VK+GLKDLS+SR TFDWG+ +P  P ++MYVW+DALTNYLT 
Sbjct: 184 EHPEFIAPATRRNEIVSYVKAGLKDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTG 243

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D    +  KFWPAD+H+IGKDI RFH +YWPAFL+SA +PLPK+VF HGF+ +KGE
Sbjct: 244 VGFPDTDSPAFRKFWPADVHIIGKDITRFHTVYWPAFLMSAGVPLPKRVFVHGFLYNKGE 303

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP+E+++E G+DA+R+FL+REI+ G+DG Y  D +  R+NADLAN  GNL
Sbjct: 304 KMSKSVGNVVDPLELVDEYGLDAVRFFLLREISYGQDGSYSHDAIVARINADLANEFGNL 363

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V RS++M+ K+ D  +PTPG FT  D ++L   + +L+  R     Q +H AL  +   +
Sbjct: 364 VQRSLTMVHKNCDAAVPTPGEFTAEDRALLDRAAGLLERCRAEFDAQQMHLALEAIWLTL 423

Query: 422 SEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            E +RYF AQ+PW L+K+  +    R +TVLYVT+EV+R +AIL+Q  +P  A +I D+L
Sbjct: 424 GETNRYFSAQQPWALRKSGTEADLARMATVLYVTLEVVRIVAILVQPVMPGSAGRILDLL 483

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             A + R F  L   L PG  L    +P+FPR++
Sbjct: 484 --AQQGRTFADLATPLTPGTPLPAP-EPVFPRYV 514


>gi|134297944|ref|YP_001111440.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050644|gb|ABO48615.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 518

 Score =  475 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 223/511 (43%), Positives = 328/511 (64%), Gaps = 7/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YP+   HIGHAY  + AD +AR+ RL G DV F TG+DEHGQKI +AA
Sbjct: 4   KKPNFYITTPIYYPSDNLHIGHAYTTVAADTMARYKRLTGYDVWFLTGSDEHGQKIERAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +N   T K +VD     F+ + + LD+SY+DFIRTT++RHH   +  ++++ D+GDIYK 
Sbjct: 64  KNKNQTPKEYVDHIVSGFKKLWERLDVSYNDFIRTTDERHHKVVQKFFQQLFDQGDIYKS 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E ++ + ++ +G            V+ + EE YFFR S Y ++ L + E 
Sbjct: 124 EYEGWYCTPCETFFTEYQLAEGK----CPDCQREVEKVREESYFFRQSKYAERWLKFIEE 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +PEFI P+ RRNE++SFVK GL+DL +SR TFDWGI++P DP++++YVW+DALTNY++  
Sbjct: 180 NPEFIQPVSRRNEMVSFVKQGLEDLCVSRTTFDWGIRVPFDPKHVVYVWVDALTNYISAL 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    +    KFWPAD+H++ KDI+RFHAI WP  L++ +LPLPKKV +HG++L    K
Sbjct: 240 GYDTGDNSLFQKFWPADIHLMAKDIVRFHAIIWPILLMALDLPLPKKVIAHGWLLLDSGK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP  +I++ GVDA+RYFL+RE+  G DG Y ++ L KR+N DLAN  GNL+
Sbjct: 300 MSKSKGNVVDPHVLIDKYGVDAVRYFLLRELPFGSDGLYSEEALVKRINTDLANDYGNLL 359

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS +M+ K   G++ TPGA    DE ++ + +   + + E M+   +  ALA +  +V 
Sbjct: 360 SRSATMMEKYQQGVLQTPGAPEGPDEELIDLATATPKLVEEYMEKSELSNALAAIWQMVG 419

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y +   PW L K N  +R +TVLY   EV+R   I++  F+P+L  +++  L + D
Sbjct: 420 RANKYLEETAPWTLAKNNETERLNTVLYNVAEVMRFATIMITPFMPQLPKRVWPQLGIED 479

Query: 482 --ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             E   ++SL     P     K  + +FPR 
Sbjct: 480 QTEIHTWESLRWGKLPVGTTVKRGEVLFPRI 510


>gi|172056076|ref|YP_001812536.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171988597|gb|ACB59519.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 651

 Score =  475 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 220/511 (43%), Positives = 342/511 (66%), Gaps = 11/511 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSAKLHIGHAYTTVAGDAMARYKRLQGFDVRYLTGTDEHGQKIQEKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ + FVD      + + D LDISYDD+IRTTE RH +    +++ + +KGDIY G Y
Sbjct: 63  AGVSEQEFVDGVVEQIKVLWDRLDISYDDYIRTTEPRHKEVVERVFETLLEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+ DE YY + ++  G          +PV+ + EE YFFR+S Y D+L+ YYE++P
Sbjct: 123 EGWYSVPDETYYTESQLVDGKS----PDSGHPVELVREECYFFRISQYADRLVEYYEANP 178

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            FILP  R++E+I+   K GL+DL++SR TFDWG+K+P +P++++YVW+DALTNY+++ G
Sbjct: 179 SFILPESRKHEMINNFIKPGLQDLAVSRTTFDWGVKVPSNPKHVVYVWVDALTNYISSLG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +  G+  K+WPAD+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG++L K  K+
Sbjct: 239 YGTDDQGNFDKYWPADVHLVGKEIVRFHTIVWPALLMALDLPLPKQVFAHGWLLMKDGKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+ +I+  G+DALRY+L+RE+  G DG +  +   +R+N DLAN +GNL++
Sbjct: 299 SKSKGNVVDPVPMIDRYGLDALRYYLLREVPFGSDGMFTPEAFVERMNFDLANDLGNLLN 358

Query: 364 RSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R+++MI K +DG+IPT  G  T  DE++ ++    ++++   M++     AL+ +  L+S
Sbjct: 359 RTIAMITKYFDGVIPTYAGNVTPFDETLSTLAKETVEKVEAAMEHMEFSVALSHIWQLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D  +PW L K     D  ++ +   V  +R +AI+LQ F+ +   ++F  L + 
Sbjct: 419 RANKYIDETQPWVLAKDESKTDELASSMVHLVGALRHVAIMLQPFMTRSPKEMFRQLGLE 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509
            +   + +L+Q   ++ G  +    +PIFPR
Sbjct: 479 GQPMDWTALEQFAAIEEGTKVGAA-EPIFPR 508


>gi|126654257|ref|ZP_01726045.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           B14905]
 gi|126589290|gb|EAZ83448.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
           B14905]
          Length = 658

 Score =  475 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 218/516 (42%), Positives = 327/516 (63%), Gaps = 11/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI + 
Sbjct: 3   EQKKTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG   + +V++ +   + +  ++DISYDDFI+TT++RH      +++K  D GDIYK
Sbjct: 63  AAEAGKHPQDYVNEIAEAAKKLWALMDISYDDFIQTTQERHTKAVEKIFQKFLDNGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++  G           PV  ++EE YFF +  Y D+LLSYYE
Sbjct: 123 GEYEGWYCTPCESFFTETQLVDGN----CPDCGRPVHKVKEESYFFNMKKYADRLLSYYE 178

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +  FI P  R+NE+I+   K GL+DLS+SR +FDWGIK+P DP++++YVW+DALTNY+T
Sbjct: 179 ENLGFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNYIT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           + GYL + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K 
Sbjct: 239 SLGYLSDDETLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI P  +IE  G+DA RYFL+RE+  G DG +  +   +R N DLAN +GN
Sbjct: 299 GKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R++SMI K YDG+IP+     TE D ++      V  +  E+M+       LA + +
Sbjct: 359 LLNRTISMINKYYDGIIPSENLQSTEFDAALKEQAESVRIKYEESMEKMQFSVVLADLWT 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LVS  ++Y D  +PW L K   D  +  +V+    E + Q+A++LQ F+  +  ++ + L
Sbjct: 419 LVSRTNKYIDETQPWVLAKEEADKPKLGSVMRNLAESLHQIAVMLQPFMTTIPKRMMEQL 478

Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
            + D+   + +++     +     + +   PIFPR 
Sbjct: 479 GLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 514


>gi|83311547|ref|YP_421811.1| methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946388|dbj|BAE51252.1| Methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 516

 Score =  475 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 260/513 (50%), Positives = 347/513 (67%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K
Sbjct: 1   MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  GVT +   DQNS NFR++A +L  + DDFIRTTE RH   C+ LW K+  KGDIY
Sbjct: 61  SAEAFGVTPQALADQNSANFRELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWYS+RDEA+Y +DE+ KGADG        PV+W++E  YFFRLSA+QD+LL +Y
Sbjct: 121 LGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVKEPSYFFRLSAWQDRLLRWY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+ + P  RRNEV+SFVK GL+DLS+SR +F WGI +P D  +IMYVW+DALTNY+T
Sbjct: 181 EDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D      A++WP  +H++GKDI+RFHA+YWPAFL++A+LP PK+VF+HG+  ++G
Sbjct: 241 AVGYPDTTG-DFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKS+GNVIDP+ +IE  G+D +RYFL+RE+  G DG +    +  R+N++LAN  GN
Sbjct: 300 QKISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV RS+SMI K+  G+ P     T+ D+ +L     +L ++R+ M  QL H A+  +  +
Sbjct: 360 LVQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKVRDAMDRQLYHEAIEAIWVV 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V   + Y D Q PW LKKT+P R  TVL+V  E IR LA+L Q F+P  + +I D L V 
Sbjct: 420 VRAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVP 479

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
           +  R F        LK G  L  T   +FPR++
Sbjct: 480 EAERSFAFFGPGHALKAGISLP-TPQGVFPRYV 511


>gi|118445100|ref|YP_879163.1| methionyl-tRNA synthetase [Clostridium novyi NT]
 gi|118135556|gb|ABK62600.1| methionyl-tRNA synthetase [Clostridium novyi NT]
          Length = 646

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 216/511 (42%), Positives = 321/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+A+ HIG+ Y  + AD +ARF RL G D  F TGTDEHGQKI + A
Sbjct: 2   NKGNFYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T K +VD+     +D+  V++ISYD FIRTT+  H +T + +++K+ DKGDIYKG
Sbjct: 62  EGKGITPKKYVDEIVAGIQDLWKVMNISYDKFIRTTDDYHVETVQKIFEKLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y ES
Sbjct: 122 EYEGLYCTPCESFWTETQLVDGK----CPDCGRPVEKTKEEAYFFKMSKYADRLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++   + GL+DL +SR +FDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIQPESRKNEMLNNFLRPGLQDLCISRTSFDWGIPVSFDEKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G 
Sbjct: 238 LGYDQENDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++ E G D +RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLVNEFGTDPVRYYLLHEIPFGQDGMYTGETFIKKTNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R+++MI K +DG+IP P A  + D  ++ V     +++   M    I  AL ++ +LV
Sbjct: 358 VNRTIAMINKYFDGVIPAPKAEEDIDNDLIRVALEAPKKVEGKMDALKIPEALDEIWTLV 417

Query: 422 SEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI   L V
Sbjct: 418 RRSNKYIDETMPWALAKEEDKRERLGTVLYNLVESLRIVSVMLSAFLPETSKKINSQLNV 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   +     + G  + +    IFPR 
Sbjct: 478 QLATWDSIASFDGTRAGTKVGEAV-AIFPRI 507


>gi|150014947|ref|YP_001307201.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901412|gb|ABR32245.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 645

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 211/512 (41%), Positives = 318/512 (62%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKTYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPKQHVDEVVAGIKDLWSMMNISYDKFIRTTDDYHIKAVQDIFKKLYDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y DKL+ Y E H
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGN----CPDCGRPVEKSKEEAYFFKMSKYADKLIKYIEDH 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+++   + GL+DL +SR +F+WG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PEFIQPESRKNEMLNNFLRPGLQDLCVSRTSFNWGVPVTFDESHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         K+WPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQENKDLYNKYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L++EI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLKEIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+M+ K + G +P        D+ ++++      +I E +    I +AL  V  L+ 
Sbjct: 362 SRTVAMVEKYFGGEMPAQDEKEAIDDELINLALSAPAKIEEAINELNIPQALEYVFELIR 421

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R  TVLY   E +R  ++++ AF+P+ + KI + +   
Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLAESLRFASVMISAFLPETSKKINEQINTT 481

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           +    ++SL     +K G  + K  D +FPR 
Sbjct: 482 E--ISWESLKSFDGIKAGTKVVKA-DNLFPRI 510


>gi|257870964|ref|ZP_05650617.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805128|gb|EEV33950.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 668

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 211/521 (40%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI K
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAVARYKRLMGFDVFYLTGVDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEELGVDPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTETQLAEVYRDEEGHVIGGKAPSGHEVELVKESSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFI P  R+NE+I+   K GL+DL++SR TF WGI +   P++++YVWID
Sbjct: 181 RLVQYYDEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFKWGIPVTASPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F H
Sbjct: 241 ALSNYITALGYGSDDDSLFQKYWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNV+ P  ++E   +DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLMMKDGKMSKSKGNVVYPEMLVERYSLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  +G++P      T  D  + +  + V+    E M       
Sbjct: 361 LANDLGNLLNRTIAMINKYCEGIVPKYASKVTPYDSELSTTAANVVGRYHEAMDKMEFST 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL++V +L+S  ++Y D  +PW L K         +V+    E +R +AILLQ  + +  
Sbjct: 421 ALSEVWTLISRANKYIDETQPWVLAKDPEKKAELDSVMVHLAESLRIVAILLQPIMTETP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
             IF  L +  E    + L          +     PIFPR 
Sbjct: 481 ANIFHQLGLTSEAMDLKDLRFGEFPSDTKVVAKGTPIFPRL 521


>gi|229917422|ref|YP_002886068.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468851|gb|ACQ70623.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 653

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 219/510 (42%), Positives = 331/510 (64%), Gaps = 8/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+A+ HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI + A+
Sbjct: 3   KPTFYITTPIYYPSAKLHIGHAYTTVAGDAIARYKRLKGFDVRYLTGTDEHGQKIQEKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD+     + + D L+ISYDD+IRTTE RH      +++ +   GDIY G 
Sbjct: 63  EAGVTPQAFVDEVVEEIKVLWDRLEISYDDYIRTTEDRHKKVVEHVFETLLKNGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+ DE YY + ++  G          +PV+ + EE YFFRLS Y D+L+ Y+ESH
Sbjct: 123 YEGWYSVPDETYYTESQLVDGKS----PDSGHPVELVREECYFFRLSKYADRLIEYFESH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FILP  R+ E+I+   K GL+DL++SR TFDWG+++P +P++++YVW+DALTNY+++ 
Sbjct: 179 PDFILPESRKTEMINNFLKPGLQDLAVSRTTFDWGVQVPSNPKHVVYVWVDALTNYISSL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + D    ++WPAD+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG++L K  K
Sbjct: 239 GYGTDNDELFNRYWPADVHLVGKEIVRFHTIIWPALLMALDLPLPKQVFAHGWLLMKDGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DPI +I+  G+D++RY+L+RE+  G DG +  +    R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPIPLIDRYGLDSVRYYLLREVPFGADGTFTPEAFVDRLNFDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R+++MI K +DG IP   G  T  D  +L+V     ++  E M++     AL  +  LV
Sbjct: 359 NRTIAMIKKYFDGNIPAYNGNVTAFDAELLNVVKETTRKTEEAMEHMEFSVALTNIWQLV 418

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D  +PW L K     +  ++V+     V+R +AI++Q F+ +   ++F  L +
Sbjct: 419 SRANKYIDETQPWVLVKEESKREELASVMTHLAGVLRHVAIMIQPFMTRAPKEMFRQLGL 478

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             E+  +++LD        +     PIFPR
Sbjct: 479 EGEDMSWEALDTFADFSDAVVTDGTPIFPR 508


>gi|227544734|ref|ZP_03974783.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909020|ref|ZP_07126483.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185274|gb|EEI65345.1| methionine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894427|gb|EFK87785.1| methionine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 675

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 208/520 (40%), Positives = 315/520 (60%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLRGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  + +VDQ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIYK
Sbjct: 63  AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EEE YFF++S Y D 
Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+I+   K GL+DL+++R +F WG+K+P+DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFAWGVKVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +G  + T  A T+ D  +    S V+ E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K +  +   S V+    + +R +A L+Q  +P    
Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLRIIAALIQPIMPHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +I + L +   +     L          +     PIFPR 
Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522


>gi|168205784|ref|ZP_02631789.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662741|gb|EDT15424.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 645

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 313/512 (61%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI   L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINAQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|308177197|ref|YP_003916603.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744660|emb|CBT75632.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 516

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 254/511 (49%), Positives = 344/511 (67%), Gaps = 3/511 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++  YI+TAI+YPN  PHIGHAYE++  DV+ARF RLDG DV F TGTDEHGQK+ + 
Sbjct: 3   SQQKPFYITTAISYPNGTPHIGHAYEVVATDVMARFKRLDGYDVFFMTGTDEHGQKMMQT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   +T      +NS  F+ M D L  SYD FIRTT+  HH   + LW+++    DIY 
Sbjct: 63  AEKLEITPAQLAQRNSDAFQSMNDELGTSYDRFIRTTDADHHAAAQELWRRMEANDDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEA+Y +++     DG  Y A+    V W EEE YFFRLS YQDKLL YY
Sbjct: 123 DKYAGWYSVRDEAFYTEEQTEVREDGIRYAAETDTEVTWTEEESYFFRLSKYQDKLLDYY 182

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +PEF  P  R NEV+ FV+SGL DLS+SR TFDWGI +P + +++MYVW+DALTNYLT
Sbjct: 183 RDNPEFGAPRSRFNEVVRFVESGLTDLSISRTTFDWGIPVPGNEKHVMYVWVDALTNYLT 242

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D    S  K+WPAD+HVIGKDI RFHAIYWPAFL+SA LPLPK+V  HGF+ + G
Sbjct: 243 GVGFPDVDSASFKKYWPADVHVIGKDISRFHAIYWPAFLMSAKLPLPKRVMIHGFLHNNG 302

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN + P + +   G+D +RYF +RE+  G DG Y+ + +  R+N DLAN  GN
Sbjct: 303 VKMSKSLGNTVSPDDFVNRYGLDQVRYFFLREVPFGADGNYNHETIVARINGDLANNFGN 362

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G++PTP   +E+D +IL    ++L+  RE    Q   +AL  V  +
Sbjct: 363 LAQRSLSMVAKNCGGVVPTPAELSEADNAILDAAGQLLEINREAYSRQEFSKALEAVWHV 422

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + + YF  Q+PW+LKKT+P+R +TVLYVT+E++R++A+LLQ  +P+    + + L V 
Sbjct: 423 LGDTNAYFAEQEPWKLKKTDPERMATVLYVTIEIVRKVALLLQPVLPQAMTSMLNALAVG 482

Query: 481 D-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   R F+S D  L PG  L     P+FPR+
Sbjct: 483 EGSARNFESFDSALVPGTELP-VPSPVFPRY 512


>gi|158321682|ref|YP_001514189.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141881|gb|ABW20193.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 654

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 215/514 (41%), Positives = 326/514 (63%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+ + HIGH Y  + ADVLARF R  G DV F TGTDEHG+KI +AA
Sbjct: 2   SKGTFYLTTPIYYPSGRLHIGHTYTTVAADVLARFKRFTGYDVQFLTGTDEHGEKIQEAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGV+ K ++D+     +D+   +DISYD FIRTT++ H +  + +++ + DKGDIYK 
Sbjct: 62  EKAGVSPKEYLDKIVEEIKDLWKKMDISYDIFIRTTDQEHEERVQKIFQTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++    +G      + P    +EE YFF+LS YQD+LL Y+E 
Sbjct: 122 EYEGWYCTPCESFWTETQLK---EGHVCPDCNRPAHLAKEEAYFFKLSKYQDRLLQYFEE 178

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPE   P  R+NE+++   K GL+DL +SR TFDWGIK+P DP++I+YVW DA+ NY+T 
Sbjct: 179 HPEICYPESRKNEMVNNFLKPGLEDLCVSRTTFDWGIKVPFDPKHIIYVWFDAVCNYITA 238

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + + +  K+WPAD+H++GK+I+RFH I WPA L++  +PLPK V+ HG+IL   +
Sbjct: 239 LGYGSDNEETFNKYWPADVHLVGKEIVRFHTIIWPAILMALEIPLPKMVYGHGWILFGAD 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++ P  +IE  G+DA++YFL+RE   G+DG +       R+N+DLAN +GNL
Sbjct: 299 KMSKSKGNIVYPEPLIERYGLDAIKYFLLREFTFGQDGNHTNRNFINRLNSDLANDLGNL 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+VSMI K  +G+IP+PG   E D S+  + +    ++   +     H  L ++  +V
Sbjct: 359 VSRTVSMIEKYNEGIIPSPGVEGEFDGSLKEIATGAASKVENAINKLQFHDGLEEIWKVV 418

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            + ++Y D   PW L K   N +R +TVLY   E IR +++L++ F+    NKI+  + +
Sbjct: 419 RKTNKYIDETAPWVLAKDEANKERLNTVLYNLAEAIRIISVLIKPFMESTTNKIWSQVGI 478

Query: 480 ADEN-RCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            ++    ++S     +LK G  + K  + +FPR 
Sbjct: 479 TEDQGTDWESTGTFGKLKAGTAV-KKGEALFPRL 511


>gi|170755122|ref|YP_001779702.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120334|gb|ACA44170.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 645

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 214/511 (41%), Positives = 319/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A
Sbjct: 2   SKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   VT K +VD+     +++  +++I YD FIRTT++ H +  + ++K + DKGDIYK 
Sbjct: 62  EAKKVTPKAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWY    E+++ + ++  G           PV+  +EE YFF++S Y  KL+ Y ES
Sbjct: 122 EYSGWYCTPCESFWTETQLEDGK----CPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPAD+H++GKDILRFH IYWP  L++ ++PLPK+VF HG++L  G 
Sbjct: 238 LGYNTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+MI K +DG IP      + DE ++ +     +++ ENM    I  AL ++ + +
Sbjct: 358 LSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMGKLRIPEALEEIWTFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY   E +R +++ + AF+P+ + KI + +  
Sbjct: 418 GRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISVCILAFIPETSIKINEQINA 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              N    S     K G  + K  + IFPR 
Sbjct: 478 DVLNWDSLSKFNGTKVGTKV-KKGEAIFPRI 507


>gi|169343256|ref|ZP_02864267.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182624314|ref|ZP_02952099.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|169298554|gb|EDS80635.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|177910532|gb|EDT72905.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 645

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 313/512 (61%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI   L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKIDAQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|110801166|ref|YP_697211.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675813|gb|ABG84800.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 645

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 313/512 (61%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI   L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKIDAQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|168209762|ref|ZP_02635387.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168217641|ref|ZP_02643266.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|170712109|gb|EDT24291.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|182380303|gb|EDT77782.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 645

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 313/512 (61%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQEDQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K +DG+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI   L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKIDAQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|83593036|ref|YP_426788.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83575950|gb|ABC22501.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 519

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 251/508 (49%), Positives = 342/508 (67%), Gaps = 4/508 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K+A 
Sbjct: 5   KPPFYLTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVQKSAT 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  + F D+ S NFRD+A  ++ S D FIRTTE RH + C+ LW  + ++G+IY   
Sbjct: 65  AAGIDPQTFTDRVSANFRDLAAAMNFSNDAFIRTTEPRHKEACKALWTLLVERGEIYLDA 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY++RDEA+Y +DE+   ADG        PV+W+EE  YFFRLS +Q  LL  Y + 
Sbjct: 125 YRGWYAVRDEAFYGEDELTTAADGSRLAPTGAPVEWVEEPSYFFRLSKWQQPLLDLYAAR 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEVISFVK GL DLS+SR TF WG+ +P D  ++MYVW+DALTNY+T  G
Sbjct: 185 PDFIAPDSRRNEVISFVKGGLTDLSISRTTFSWGVPVPGDEDHVMYVWLDALTNYITAVG 244

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D      A++WPA+LH++GKDILRFH +YWPAFL++A L +P +VF+HG+  ++G+KI
Sbjct: 245 FPDQTG-DYARYWPANLHMVGKDILRFHTVYWPAFLMAAGLEVPGRVFAHGWWTNEGQKI 303

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVIDP  +IE  G+D +RYFL+RE+  G DG +    +  R+N +LAN +GNL  
Sbjct: 304 SKSVGNVIDPRALIETYGLDPVRYFLLREVPFGNDGDFSHRAMINRMNGELANDLGNLAQ 363

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +SMI K+  G +P PG F+E D+++L+    +L ++R+ M  Q  H AL  +  ++  
Sbjct: 364 RVLSMIAKNCAGAVPEPGPFSEDDDALLAAAVALLDKVRQAMDRQAFHEALEAIWVVIRA 423

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + Y D Q PW L+K +P R +TVLYV  EVIR++A+L+Q FVP  A ++ D L    E 
Sbjct: 424 ANGYVDRQAPWALRKNDPPRMATVLYVLAEVIRRVALLMQPFVPASAARMLDQLGQGPEA 483

Query: 484 RCFQSLDQR--LKPGFMLHKTFDPIFPR 509
           R   +L  R  L PG +L K  + IFPR
Sbjct: 484 RDTTALGDRPLLAPGTVLPKP-EGIFPR 510


>gi|168187465|ref|ZP_02622100.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294617|gb|EDS76750.1| methionyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 646

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 215/511 (42%), Positives = 322/511 (63%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+A+ HIG+ Y  I AD +ARF RL G D  F TGTDEHGQKI + A
Sbjct: 2   NKGNFYITTPIYYPSAKLHIGNTYTTIAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T K +VD+   + +D+  ++++SYD FIRTT+  H +T + ++KK+ D+GDIYKG
Sbjct: 62  EGKGITPKAYVDEIVADIKDLWKIMNVSYDKFIRTTDDYHIETVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y ES
Sbjct: 122 EYEGLYCTPCESFWTETQLVDGK----CPDCGRPVEKTKEEAYFFKMSKYADRLIEYIES 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++   + GL+DL +SR +FDWGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 HPDFIQPESRKNEMLNNFLRPGLQDLCISRTSFDWGIPVSFDEKHVIYVWIDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G 
Sbjct: 238 LGYDQENDELYQKYWPANVHLVGKDILRFHTIYWPIMLIALDLPLPKQVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++ E G D +RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVTLVNEFGTDPVRYYLLHEIPFGQDGMYTGETFIKKTNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R+++MI K +DG+IP P A  + D  ++ V     +++   M    I  AL ++ +LV
Sbjct: 358 VNRTIAMINKYFDGVIPAPKAEEDIDNDLIRVALEAPKKVEGKMDALKIPEALDEIWTLV 417

Query: 422 SEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI   L V
Sbjct: 418 RRSNKYIDETMPWALAKEEDKRERLGTVLYNLVEGLRIVSVMLSAFLPETSKKINSQLNV 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   +     + G  + +    IFPR 
Sbjct: 478 QLATWDSIASFDGTRAGTKVGEAV-AIFPRI 507


>gi|182420024|ref|ZP_02951258.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669576|ref|ZP_04529556.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376061|gb|EDT73648.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655020|gb|EEP52580.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 647

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 214/512 (41%), Positives = 318/512 (62%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD +ARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKPFYITTPIYYPSTKLHIGNTYTTVAADAIARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQDIFKKLYDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGN----CPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEEH 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++   + GL+DL +SR +FDWG+ +  D ++++YVWIDAL+NY+T  
Sbjct: 182 PHFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDEKHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+V+MI K +DG IP      E D+ ++++      ++ E +    +  AL  V  L+ 
Sbjct: 362 SRTVAMIEKYFDGEIPAQAEKGEFDDELINLALSTPAKVEEAVTELNLPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R  TVLY  +E +R  ++++ AF+P  A KI + +   
Sbjct: 422 RANKYIDETTPWILAKDEDKKARLGTVLYNLIESLRFASVMISAFLPDTAKKINEQINT- 480

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            E   + SL +    K G  + K  D +FPR 
Sbjct: 481 -EVLSWDSLKEFNGTKAGTKVVKA-DNLFPRI 510


>gi|188588457|ref|YP_001919550.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498738|gb|ACD51874.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 645

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 212/512 (41%), Positives = 318/512 (62%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  ++++SYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGN----CPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++   + GL+DL +SR +FDWG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKDLYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+MI K +DG I       E DE ++++      +++E +    I  AL  V  L+ 
Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAAPNKVQEAIDELNIPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R  TVLY  +E +R  ++++ +F+P  A KI + +   
Sbjct: 422 RANKYIDETTPWILAKDENKKARLGTVLYNLIESLRFASVMISSFLPDTAKKINEQINTD 481

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           +    ++SL     +K G  + K  + +FPR 
Sbjct: 482 E--ISWESLKSFNGIKAGTKVVK-GENLFPRI 510


>gi|168213448|ref|ZP_02639073.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170715012|gb|EDT27194.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 645

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 205/512 (40%), Positives = 312/512 (60%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYNKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K + G+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI   L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINAQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|18311506|ref|NP_563440.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|25009370|sp|Q8XHG1|SYM_CLOPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18146190|dbj|BAB82230.1| methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 645

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 205/512 (40%), Positives = 312/512 (60%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIG+ Y  + AD +ARF RL G +V+F TGTDEHGQKI + A 
Sbjct: 3   KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEVMFLTGTDEHGQKIERIAN 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K  VD+     +D+  +++ISYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 63  EKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVNGN----CPDCGRPVEKAKEEAYFFKMSKYADRLIQYIEEH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+++   + GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFTWGIPVSFDEKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         KFWPAD+H+IGKDILRFH IYWP  L++  L LPK+VF HG++L  G K
Sbjct: 239 GYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIMLMALGLELPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K+VN DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M+ K + G+I  P      D+ ++++      ++  ++    I  AL  + +L+S
Sbjct: 359 SRTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLIS 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  +E +R +++++  F+ + + KI   L   
Sbjct: 419 RANKYIDETTPWILAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINAQLNTK 478

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
                ++SL +      G  + K  D IFPR 
Sbjct: 479 --VTTWESLKEFNGTVAGDKVVK-GDVIFPRI 507


>gi|161511098|ref|NP_771156.2| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 543

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 260/507 (51%), Positives = 357/507 (70%), Gaps = 4/507 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAIAYPN  PHIGHAYE I  D LARF RLDG DV F TGTDEHG K+ + AQN G
Sbjct: 35  FYITTAIAYPNGNPHIGHAYEAIATDTLARFARLDGKDVFFLTGTDEHGLKMIQTAQNEG 94

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T      +N+  F+ M + L++S+D FIRTTE++HH + + +W+++   GDIY   Y+G
Sbjct: 95  LTPSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 154

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEAYY +DE     DG     Q  PV+W+EE+ YFFRLSAYQ+KLL  Y  +P+F
Sbjct: 155 WYSVRDEAYYAEDETRLNDDGVRLGPQGTPVEWVEEKSYFFRLSAYQEKLLKLYTDNPDF 214

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV+SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNY+T  G+  
Sbjct: 215 IGPDSRRNEVVSFVKGGLRDLSISRTTFDWGVKVPGDEEHVMYVWVDALTNYITGVGF-P 273

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +      ++WPAD+H+IGKDI+RFHA+YWPAFL+SA +P+ K+V++HGF+ ++GEK+SKS
Sbjct: 274 DESDKNWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPVQKRVYAHGFLFNRGEKMSKS 333

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DP  + ++ GVD +RYF +RE+  G+DG Y+ + +  R+NADLAN +GNL  RS+
Sbjct: 334 VGNVVDPFNLADQYGVDQMRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSL 393

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K   G++P PG F+++D++IL++   ++   RE M  Q IH  L  V ++V+E +R
Sbjct: 394 SMIAKQLGGVLPEPGEFSDNDKAILAMADGMIAASREAMATQQIHHWLNAVWAVVAEANR 453

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           YF  + PW L KT+P R  TVLYVT EV+RQ+AIL Q  +P  +  + D L V    R F
Sbjct: 454 YFAGEAPWALAKTDPARQKTVLYVTAEVVRQIAILAQPAMPTASGLLLDSLGVPGGERNF 513

Query: 487 QSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            +L    R+ PG  L     P FPR++
Sbjct: 514 AALGGAKRIAPGSTLPAP-TPAFPRYI 539


>gi|169825668|ref|YP_001695826.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168990156|gb|ACA37696.1| Methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 663

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 216/516 (41%), Positives = 327/516 (63%), Gaps = 11/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI + 
Sbjct: 8   EQKKTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLRGYDVRFLTGMDEHGQKIQEK 67

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG   + +V++ + + + +  ++DI+YDDFI+TT++RH      +++K  D GDIYK
Sbjct: 68  AAEAGKHPQDYVNEIAESAKKLWALMDITYDDFIQTTQERHTKAVEKIFQKFLDNGDIYK 127

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++  G           PV  ++EE YFF +  Y D+LL+YYE
Sbjct: 128 GEYEGWYCTPCESFFTETQLVDGN----CPDCGRPVHKVKEESYFFNMKKYADRLLAYYE 183

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            + EFI P  R+NE+I+   K GL+DLS+SR +FDWGIK+P D ++++YVW+DALTNY+T
Sbjct: 184 ENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDAKHVIYVWVDALTNYIT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           + GYL + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K 
Sbjct: 244 SLGYLSDDETLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKD 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI P  +IE  G+DA RYFL+RE+  G DG +  +   +R N DLAN +GN
Sbjct: 304 GKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R++SMI K +DG+IP+     TE D ++      V  +  E+M+       LA + +
Sbjct: 364 LLNRTISMINKYFDGIIPSENLQSTEFDAALKEQAESVRIKYEESMEKMQFSVVLADLWT 423

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LVS  ++Y D  +PW L K   D  +  TV+    E + Q+A++LQ F+     ++ + L
Sbjct: 424 LVSRTNKYIDETQPWVLAKEEADKPKLGTVMRNLAESLHQIAVMLQPFMTTTPKRMMEQL 483

Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
            + D+   + +++     +     + +   PIFPR 
Sbjct: 484 GLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 519


>gi|13470650|ref|NP_102219.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|25009388|sp|Q98MV8|SYM_RHILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14021392|dbj|BAB48005.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 516

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 267/511 (52%), Positives = 358/511 (70%), Gaps = 5/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y++T I YPN +PHIGHAY +I  D LARF RLDG DV F TGTDEHG K+ + A
Sbjct: 2   SREKYYLTTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +   D+NS  FR M + +  S D++IRTTE RH+ +C+ +WK ++  GDIY  
Sbjct: 62  EKEGITPQALADRNSAIFRSMTEAVGGSNDEYIRTTEPRHYASCQAIWKAMAANGDIYLD 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWYS+R EAY+++ E   G DG       +PV+W EEE YFFRLSAYQDKLL+ YES
Sbjct: 122 RYSGWYSVRQEAYFDESETTLGEDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYES 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+F+ P ERRNEV+SFVKSGLKDLS+SR TF WG+ +P D +++MYVW+DALTNY+T  
Sbjct: 182 QPDFVGPAERRNEVMSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAA 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +    + ++WPA  H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+ ++GEK
Sbjct: 242 GY-PDTKSDQWRYWPA-THIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  +IE  G+D +RYF +RE+  G+DG Y  D +  R NADLANG+GNL 
Sbjct: 300 MSKSVGNVVDPFALIEHYGLDQVRYFFLREVPFGQDGSYSHDAIVNRTNADLANGLGNLA 359

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+  G++P  G  T++D +IL      L   R+ M  Q IH ALA +  +V+
Sbjct: 360 QRSLSMIAKNCGGVVPKRGEMTDADSAILDQAVAALTTARKAMAGQGIHLALAAIFDVVA 419

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E DRYF  Q PW LKKT+P+R  TVL+ T E++R++A+L Q F+P  A K+ D+L V  +
Sbjct: 420 EADRYFAGQAPWALKKTDPERMETVLWTTAELVRRVAVLCQPFIPGSAAKLLDLLAVPAD 479

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            R F  +  D  L PG  L    + +FPR++
Sbjct: 480 KRDFVHVHADYALVPGTALPAP-EGVFPRYV 509


>gi|184154662|ref|YP_001843002.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183226006|dbj|BAG26522.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 666

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 314/520 (60%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H  T + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEATVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++    + GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K     ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
            +I   L +A E      L         ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|309390254|gb|ADO78134.1| methionyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 653

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 218/514 (42%), Positives = 335/514 (65%), Gaps = 7/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YP+ + HIGHAY  + AD +AR+ ++ G D +F TG+DEHGQKI + A
Sbjct: 2   TKDTYYVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMRGFDTMFLTGSDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG   K +VDQ    F+++ D LDI YD FIRTTE RH    + +++K+ D+GDIYKG
Sbjct: 62  QAAGKEAKEYVDQIVATFKNLWDKLDIEYDYFIRTTEARHEKVVQQIFEKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    EA++ + ++ +  + +     H  V+W+EEE YFF++S Y D+LL + + 
Sbjct: 122 KYEGWYCTPCEAFWTERQLEEAKEEKVCPDCHREVEWVEEESYFFKMSKYADRLLEHIKD 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HPEFI P  RRNE+I+F+++GL DLS+SR TF+WGI +P D  +++YVWIDAL+NYLT  
Sbjct: 182 HPEFIEPESRRNEMINFIENGLDDLSVSRTTFEWGIPVPIDDDHVIYVWIDALSNYLTAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY      +  K+WPADLH++GKDILRFH I WP  +++ +L LPK+VF HG++L +  K
Sbjct: 242 GY-QTDQENFEKYWPADLHLVGKDILRFHTIIWPIIIMALDLELPKQVFGHGWLLSETGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +I++ G DA+RY+L+RE+A G DG Y  + L +R+N+DLAN +GNL+
Sbjct: 301 MSKSKGNVVDPVVLIDDFGKDAIRYYLLREVAFGTDGKYSTESLIQRINSDLANDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+VSM+ + +D  IP      + D+ ++ + ++  +E+   M+      AL ++ + V 
Sbjct: 361 NRTVSMVDQYFDSEIPKVAEKADLDQELIDLAAQTKKEVEIEMEKLKYTVALEKIWNFVR 420

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR  TVLY  +E +R +A++L+ F+ +   K+   L   
Sbjct: 421 RTNKYIDQTSPWLLAKEPAKRDRLKTVLYNLLESLRIIAVMLKPFLTEAPFKMGQQLGQL 480

Query: 481 D--ENRCFQSLDQR-LKPGFMLHKTFDPIFPRFL 511
           +  E+  +++     LK G  + K  +P+FPR +
Sbjct: 481 EAIEDADWEAATWGSLKTGVKV-KNGEPMFPRIV 513


>gi|251779970|ref|ZP_04822890.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084285|gb|EES50175.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 645

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 212/512 (41%), Positives = 319/512 (62%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G DV+F TGTDEHGQKI + A+
Sbjct: 6   KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYDVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  ++++SYD FIRTT++ H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDEYHVKAVQDIFKKLHDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGN----CPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++   + GL+DL +SR +FDWG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDENHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+MI K +DG I       E DE ++++      +++E +    I  AL  V  L+ 
Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAYPNKVQEAIDELNIPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R  TVLY  +E +R  ++++ +F+P  A KI + +   
Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLIESLRFASVMISSFLPDTAKKINEQINTD 481

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           +    ++SL     +K G  + K  + +FPR 
Sbjct: 482 E--ISWESLKSFNGIKAGTKVVK-GENLFPRI 510


>gi|299782799|gb|ADJ40797.1| Methionyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 666

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/520 (39%), Positives = 313/520 (60%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++    + GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K     ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
            +I   L +A E      L         ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|260663709|ref|ZP_05864597.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260551760|gb|EEX24876.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 666

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/520 (39%), Positives = 313/520 (60%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++    + GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K     ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
            +I   L +A E      L         ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|331270594|ref|YP_004397086.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329127144|gb|AEB77089.1| methionyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 646

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 213/510 (41%), Positives = 321/510 (62%), Gaps = 8/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+A+ HIG+ Y  + AD +ARF RL G D  F TGTDEHGQKI + A+
Sbjct: 3   KGNFYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K +VD+     +D+  V++++YD FIRTT+  H +T + ++KK+ D+GDIYKG 
Sbjct: 63  AKGITPKEYVDEIVAGIKDLWKVMNVNYDKFIRTTDDYHVETVQKIFKKLYDQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+  +EE YFF++S Y D+L+ Y E H
Sbjct: 123 YEGLYCTPCESFWTETQLVDGK----CPDCGRPVEKTKEEAYFFKMSKYADRLIKYIEYH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+++   + GL+DL +SR +F+WGI +  D ++++YVWIDALTNY+T  
Sbjct: 179 PEFIQPESRKNEMLNNFLRPGLQDLCISRTSFNWGIPVSFDEKHVIYVWIDALTNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 239 GYNQDNDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNLV
Sbjct: 299 MSKSKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGMYTSETFIKKTNSDLANDLGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K +DG+IP P A  + D+ ++ +      ++   M    I  AL ++ +LV 
Sbjct: 359 NRTIAMINKYFDGIIPVPTAKDDIDDELIKIALEAPGKVEAKMDELKIPEALDKIWTLVR 418

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI   L V 
Sbjct: 419 RSNKYIDETMPWALAKEEDKKERLGTVLYNLVESLRIVSVMLSAFLPETSKKINAQLNVQ 478

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                  +     + G  + +    IFPR 
Sbjct: 479 LATWDSIASFDGTRAGTKVGEAV-AIFPRI 507


>gi|325845442|ref|ZP_08168735.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488548|gb|EGC90964.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 655

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 217/515 (42%), Positives = 331/515 (64%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  + +D +AR+ R  G DV F TG DEHGQKI + A
Sbjct: 2   SKPTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRSRGFDVRFLTGMDEHGQKIQEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG   + +VD+ +   + + +++DI+ DDFIRTTEKRH +    ++ K  + GDIYKG
Sbjct: 62  QEAGKEPQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+YY + ++  G            V+ ++EE YFF +  Y D+L+ YY +
Sbjct: 122 HYEGLYCTPCESYYTETQLVDGK----CPDCGRDVKVVKEESYFFNMKKYADRLMEYYNA 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFILP  R+NE+++   K GL+DLS+SR TFDWG+K+P D ++++YVW+DAL+NY+T 
Sbjct: 178 NPEFILPESRKNEMVNNFIKPGLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K  
Sbjct: 238 LGYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+DA+RYFL+RE+  G+DG +  +   +RVN DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPEMLIERYGLDAVRYFLLRELPFGQDGVFSPESFVERVNFDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+VSMI K +DG+IP   G  TE D+++       ++++ +N ++      L+ + +L
Sbjct: 358 LNRTVSMINKYFDGVIPAYAGQVTEFDQTLEDFIKTTVEKVEKNFEDMQFSIVLSDIWAL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+  ++Y D   PW L K   ++A+  +V+    E +RQ+AI+++ F+P+   +IF  L 
Sbjct: 418 VARTNKYIDETAPWVLAKDEANKAALESVMCHLAESLRQIAIMIEPFMPRTTPQIFAQLG 477

Query: 479 V-ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +    ++ + SL+    L  G  +     PIFPR 
Sbjct: 478 IEGAASKEWSSLNNYNTLAEGTKVVSKGTPIFPRL 512


>gi|262201453|ref|YP_003272661.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262084800|gb|ACY20768.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 523

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 264/511 (51%), Positives = 345/511 (67%), Gaps = 5/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    YI+TAIAYPN  PHIGHAYE I ADVLARFHRLDG DV F TGTD HGQK+ + A
Sbjct: 13  DGRPYYITTAIAYPNGAPHIGHAYEYISADVLARFHRLDGYDVRFLTGTDVHGQKMQQTA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+ T     +NS  F+ + D L  SY  FIRT++  H      +W+++SD GDIY  
Sbjct: 73  EKEGIPTAELARRNSDRFQALQDRLGSSYHRFIRTSDDDHKRASEAIWQRMSDNGDIYLD 132

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYE 181
            YSGWY +RDE +Y D E      G+        V  W EEE YFFRLS YQDKLL  YE
Sbjct: 133 KYSGWYDVRDETFYADSETSVNEAGERVATDTGHVLTWTEEETYFFRLSNYQDKLLELYE 192

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P+FI P  RRNEV+SFVK GL DLS+SR TFDWG+ +P  P ++MYVW+DALTNYLT 
Sbjct: 193 SDPDFIGPDVRRNEVVSFVKGGLNDLSISRTTFDWGVPVPAHPDHVMYVWVDALTNYLTG 252

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D+    + ++WPADLH+IGKDI+RFH +YWPAFL+SA + LPK+VF HGF+L+KGE
Sbjct: 253 AGFPDDEQTLR-RYWPADLHIIGKDIIRFHCVYWPAFLMSAGIDLPKRVFVHGFLLNKGE 311

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP  +I E G+D +RYF +RE++ G+DG Y  D +  R+NADLAN  GNL
Sbjct: 312 KMSKSVGNVLDPDALIAEFGLDPVRYFFLREVSYGQDGSYSTDAIISRINADLANDFGNL 371

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R++SMI K +DG +P PG + ++D  +L+    +L  +R +++ Q IH AL  + S++
Sbjct: 372 AQRTLSMIGKYFDGALPAPGVYLDADTELLARADALLDTVRAHIEVQAIHLALEAMWSVL 431

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E +RY  AQ+PW+L KT+  R  TVLYV  EV+R +A+L Q  +P    K+ D+L V D
Sbjct: 432 GETNRYISAQEPWKLAKTDLGRTGTVLYVCAEVVRIVALLSQPVMPASTAKLLDLLGVDD 491

Query: 482 E--NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               R F ++  RL PG  L K   PIFPR+
Sbjct: 492 SGAARQFSAVTDRLAPGTTLPKP-TPIFPRY 521


>gi|293374654|ref|ZP_06620969.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646744|gb|EFF64739.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 655

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 217/515 (42%), Positives = 331/515 (64%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  + +D +AR+ R  G DV F TG DEHGQKI + A
Sbjct: 2   SKPTFYITTPIYYPSGKFHIGTAYTTVASDAMARYKRSRGFDVHFLTGMDEHGQKIQEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG   + +VD+ +   + + +++DI+ DDFIRTTEKRH +    ++ K  + GDIYKG
Sbjct: 62  QEAGKEPQAYVDEIADAAKKLWEMMDITNDDFIRTTEKRHEEMVEKIFAKFMENGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+YY + ++  G            V+ ++EE YFF +  Y D+L+ YY +
Sbjct: 122 HYEGLYCTPCESYYTETQLVDGK----CPDCGRDVKVVKEESYFFNMKKYADRLMEYYNA 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PEFILP  R+NE+++   K GL+DLS+SR TFDWG+K+P D ++++YVW+DAL+NY+T 
Sbjct: 178 NPEFILPESRKNEMVNNFIKPGLEDLSVSRTTFDWGVKVPGDIKHVIYVWVDALSNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K  
Sbjct: 238 LGYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMKDG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+DA+RYFL+RE+  G+DG +  +   +RVN DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPEMLIERYGLDAVRYFLLRELPFGQDGVFSPESFVERVNFDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R+VSMI K +DG+IP   G  TE D+++       ++++ +N ++      L+ + +L
Sbjct: 358 LNRTVSMINKYFDGVIPAYAGQVTEFDQTLEDFIKTTVEKVEKNFEDMQFSIVLSDIWAL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+  ++Y D   PW L K   ++A+  +V+    E +RQ+AI+++ F+P+   +IF  L 
Sbjct: 418 VARTNKYIDETAPWVLAKDEANKAALESVMCHLAESLRQIAIMIEPFMPRTTPQIFAQLG 477

Query: 479 V-ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +    ++ + SL+    L  G  +     PIFPR 
Sbjct: 478 IEGAASKEWNSLNNYNTLAEGTKVVSKGTPIFPRL 512


>gi|227514298|ref|ZP_03944347.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087346|gb|EEI22658.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 666

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 206/520 (39%), Positives = 313/520 (60%), Gaps = 11/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 1   MAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + +VD+ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIY
Sbjct: 61  KAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV+K  +GQ         + VQ ++EE YFF++S Y D
Sbjct: 121 KGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ YY++HP+FI P  R NE++    + GL+DL+++R +F+WG+K+P+DP++++YVWID
Sbjct: 181 WLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIIRFHTIYWPIMLHALGLPLPKHVIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++  K  K+SKS GNV+ P  +I+  G+DA RY+L+R +  G DG +  +   ++VN D
Sbjct: 301 GWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+M+ K     ++  PGA T+ D  +  V    L E RE M       
Sbjct: 361 LANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ +  L++  ++Y D  +PW L K        S VL    + +R +A +LQ  +P   
Sbjct: 421 ALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAP 480

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
            +I   L +A E      L         ++ +   PIFPR
Sbjct: 481 KEILGQLGLAKEAISISDLSFNDFPAEVVVVEKGTPIFPR 520


>gi|259501900|ref|ZP_05744802.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170077|gb|EEW54572.1| methionine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 674

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 308/520 (59%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI + 
Sbjct: 3   TQKPTYYITTPIYYPSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + +VDQ +   + +   L I+ D FIRTT+  H    + +++K  D+GDIYK
Sbjct: 63  ADKLGMQPQEYVDQMAAGIKQLWQTLKITNDKFIRTTDDYHERAVQKIFQKFLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ ++EE YFF++S Y D 
Sbjct: 123 GEYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY+ HP+FI P  R NE+++   K GL+DL+++R +F+WG+K+P+DPQ+++YVWIDA
Sbjct: 183 LMKYYQDHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPQHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG
Sbjct: 243 LSNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  K  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +  +  T  A T  D  +    ++ + E ++ M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGRIQGTNDAQTAYDADLEDTAAQAVAEYKQEMDKTHFADA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K +  +A    V+    + +R +A LLQ  +P    
Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKQAELSDVMTHLAKSLRVIAALLQPVMPDAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +I   L +  E      LD         +     PIFPR 
Sbjct: 483 EICRQLGLPAEAISLTDLDFNDFPASSQVVAKGTPIFPRL 522


>gi|182678510|ref|YP_001832656.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634393|gb|ACB95167.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 530

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 254/512 (49%), Positives = 357/512 (69%), Gaps = 4/512 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R + Y++TAI Y N  PHIGHAYE +  D + RF RLDG DVLF TG DEHGQK+ +
Sbjct: 15  MAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVLFVTGMDEHGQKMQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +   D+ +  F  M   LD   DD +RTTE RHH   + +W +++  GDIY
Sbjct: 75  TAARDHITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAAQEIWNRMAANGDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWYS+RDEA++++ E+ +G +G        PV+W+EEE Y+F+LSAYQ++LL++Y
Sbjct: 135 LSKYPGWYSVRDEAFFDEGELTEGPNGTKLAPTGAPVEWVEEESYYFKLSAYQERLLAHY 194

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP+FI P + RNE++SFV+ GL DLS+SR TFDWGI +P D +++MYVW+DALTNY+T
Sbjct: 195 QAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKHVMYVWVDALTNYIT 254

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D     +A FWPAD HVIGKDI RFHAIYWPAFL+SA + LPK++  HGF+ ++G
Sbjct: 255 ATGFPDAEAP-RAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALPKQIVVHGFLFNRG 313

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP+ +IE  G+D  RYF +RE+  G+DG Y  + +  R NADLAN +GN
Sbjct: 314 EKMSKSVGNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIVNRTNADLANDLGN 373

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G +P PGAF+E+D++IL +   ++++ R+ MQ+  +H  L ++  +
Sbjct: 374 LAQRSLSMLAKNCGGKVPQPGAFSEADKAILDLSRALVEKSRDLMQDFSLHLILGEIWRV 433

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF  ++PW  +KT+P R  T+LYVT EV+R++AIL Q F+P+ A+K+ D L VA
Sbjct: 434 VGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIPQSASKLLDSLGVA 493

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            E R F  +++   L PG +L     PIFPR 
Sbjct: 494 AEARLFIHVEEGPDLPPGTVLPTPV-PIFPRI 524


>gi|296169876|ref|ZP_06851488.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895432|gb|EFG75134.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 513

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 247/510 (48%), Positives = 344/510 (67%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++TAI YPN  PH+GHAYE +  D +ARF RLDG DV F TGTDEHG K+ + A  
Sbjct: 2   RPFYVTTAITYPNGNPHVGHAYEYVATDAIARFKRLDGFDVRFLTGTDEHGLKMMETAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+ T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   Y
Sbjct: 62  EGIPTAELARRNSDVFQRLQEKLNISFDRFIRTTDPDHHEASQEIWRRMEAAGDIYLDSY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++Y+++P
Sbjct: 122 SGWYSVRDERFFVESETAVVEGTRVAVETGTPVTWTEEQTYFFRLSAYADKLLAHYDANP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+P  P +++YVW+DALTNYLT  GY
Sbjct: 182 EFIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPGHPDHVVYVWVDALTNYLTGVGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+S
Sbjct: 242 PDTDSELFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIDLPRRVFAHGFLLNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GN++DP  +++  GVD LRYFL+RE+  G+DG Y +D +  R N DLAN +GNL  R
Sbjct: 302 KSVGNIVDPDALVDTFGVDQLRYFLLREVPFGQDGSYSEDAIVTRTNTDLANELGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+ DG++P PG FT  D  +L V   +L  +R    NQ +H AL  +  ++   
Sbjct: 362 SLSMVAKNLDGIVPAPGEFTAEDTELLDVADGLLDRVRIEFDNQAMHLALEAIWLMLGAA 421

Query: 425 DRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +RYF AQ+PW L+K+    +  R +TVLY T E +R  A+L+Q  +P+ A K+ D+L  A
Sbjct: 422 NRYFSAQQPWVLRKSESEADRKRFATVLYTTCEAVRIAALLVQPVMPESAGKLLDLLGQA 481

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            E R F ++  RL PG  L      +FPR+
Sbjct: 482 PERRGFDAVATRLAPGTALPAP-TGVFPRY 510


>gi|187934680|ref|YP_001884366.1| methionyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187722833|gb|ACD24054.1| methionine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 645

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 211/512 (41%), Positives = 318/512 (62%), Gaps = 12/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG+ Y  + AD LARF RL G +V+F TGTDEHGQKI + A+
Sbjct: 6   KKPYYITTPIYYPSTKLHIGNTYTTVAADALARFKRLTGYEVMFLTGTDEHGQKIQRIAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T    VD+     +D+  ++++SYD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 66  EKGITPIEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSS 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ D ++  G           PV+  +EE YFF++S Y D+L+ Y E +
Sbjct: 126 YEGWYCTPCESFWTDTQLVNGN----CPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEEN 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P FI P  R+NE+++   + GL+DL +SR +FDWG+ +  D  +++YVWIDAL+NY+T  
Sbjct: 182 PNFIQPESRKNEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDESHVVYVWIDALSNYITAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +      KFWPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 242 GYGQDNKELYDKFWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ E GVD +RY+L+REI  G DG ++ +   K++N+DL N +GNL+
Sbjct: 302 MSKSKGNVVDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+MI K +DG I       E DE ++++      +++E +    I  AL  V  L+ 
Sbjct: 362 SRSVAMIEKYFDGEIQPQAESGEFDEELINLALAAPNKVQEAIDELNIPLALEHVFELIG 421

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R  TVLY  +E +R  ++++ +F+P  A KI + +   
Sbjct: 422 RANKYIDETTPWILAKDESKKARLGTVLYNLIESLRFASVMISSFLPDTAKKINEQINTD 481

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           +    ++SL     +K G  + K  + +FPR 
Sbjct: 482 E--ISWESLKSFNGIKAGNKVAK-GENLFPRI 510


>gi|312870209|ref|ZP_07730340.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094232|gb|EFQ52545.1| methionine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 674

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 307/520 (59%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   YI+T I YP+ + HIG++Y  +  D  ARF RL G DV F TGTDEHG KI + 
Sbjct: 3   TQKPTYYITTPIYYPSGKLHIGNSYTTVACDAEARFKRLSGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + +VDQ +   + +   L I+ D FIRTT+  H    + +++K  D+GDIYK
Sbjct: 63  ADKLGMQPQEYVDQMADGIKKLWKTLKITNDKFIRTTDDYHEQAVQKIFQKFLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ ++EE YFF++S Y D 
Sbjct: 123 GEYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVKEESYFFKMSRYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YYE HP+FI P  R NE+++   K GL+DL+++R +F+WG+K+P+DP++++YVWIDA
Sbjct: 183 LMKYYEEHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG
Sbjct: 243 LSNYITALGYGSADDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  K  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMKDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K     +  T  A T  D  +    ++ + E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQGGQVQGTNDAQTAFDADLEETAAQAIAEYKEEMDKTHFADA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K +  +A    V+    + +R +A LLQ  +P    
Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKAELSDVMTHLAKSLRVIAALLQPVMPDAPK 482

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           +I   L + +E      L          +     PIFPR 
Sbjct: 483 EICRQLGLPEEAISLTDLAFNDFPASSQVVAKGTPIFPRL 522


>gi|188584685|ref|YP_001916230.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349372|gb|ACB83642.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 655

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 211/517 (40%), Positives = 329/517 (63%), Gaps = 11/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIGH+Y  + AD +AR+ +L G DV+F TGTDEHGQKI +
Sbjct: 1   MARDNTFYITTPIYYPSDKLHIGHSYTTVAADCMARYKKLTGYDVMFLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   + FVD+   + +++  +LDI YDDFIRTTE+RH    + ++++  ++GDIY
Sbjct: 61  KAKENGKNPQQFVDEIVASIKELWTLLDIEYDDFIRTTEERHKSVVQKIFERFYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y GWY    E+++ + ++    + +        V+W++EE YFF++S Y D+LL + 
Sbjct: 121 KDQYEGWYCTPCESFWLERQLD---EAKTCPDCAREVEWVKEESYFFKMSKYADRLLEHI 177

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E++PEFI P  R+NE+I+     GL+DL +SR TF WGI++P D  +++YVW+DALTNYL
Sbjct: 178 ENNPEFIQPESRKNEMINNFLNPGLEDLCVSRTTFKWGIEVPMDKDHVVYVWLDALTNYL 237

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GYL   D    K+WP D+H++ K+I+RFH+IYWP FL++ +LPLPK+VF HG++L +
Sbjct: 238 SALGYLSEDDTKFQKYWPCDVHLMAKEIVRFHSIYWPIFLMALDLPLPKQVFGHGWLLLE 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DP  ++ + G DA+RY+L+REI+ G DG +  + L +R+N DLAN +G
Sbjct: 298 EGKMSKSKGNVVDPEVLVNKYGSDAIRYYLLREISFGSDGVFTLEALIRRINYDLANDLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R+V+MI K +DG IP P    + D  +++     + E  ++M+      AL  +  
Sbjct: 358 NLLNRTVAMIDKYFDGQIPEPVVSEQVDNDLINHAQETVTETEKHMEGMDFSEALKALWE 417

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D  +PW L K     DR +TVLY   E +R +++LL  F+P+   +I   L
Sbjct: 418 LIGRTNKYIDETQPWILGKDPNKKDRLATVLYNLSESLRYISVLLSPFMPRTPKQIRSQL 477

Query: 478 FVAD--ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            + +  E + ++SL    ++  G  + K   P+FPR 
Sbjct: 478 GIDNNKEIQTYKSLYEWGQIPSGVRVSK-DKPLFPRL 513


>gi|240169909|ref|ZP_04748568.1| methionyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 516

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 252/514 (49%), Positives = 351/514 (68%), Gaps = 5/514 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+
Sbjct: 1   MKPLQPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGV T     +NS  F+ M + L+IS+D FIRTT+  H+   + +W+++   GD+Y
Sbjct: 61  AAAAAGVPTAQLARRNSDVFQRMQEALNISFDRFIRTTDPDHYAASQEIWRRMEAAGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++Y
Sbjct: 121 LDNYSGWYSVRDERFFVESETQLVDGTRIAIETGTPVTWTEEQTYFFRLSAYADKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +HP+FI P  RRNEVISFV  GLKDLS+SR +F+WG+ +P+ P ++MYVW+DALTNYLT
Sbjct: 181 HAHPDFIAPEVRRNEVISFVSGGLKDLSVSRTSFNWGVPVPEHPDHVMYVWVDALTNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D    S  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+KVF+HGF+ ++G
Sbjct: 241 GAGYPDTGSESFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRKVFAHGFLHNRG 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNVIDP+ +I+  GVD +RYFL+RE+  G+DG Y  + +  R+N DLAN +GN
Sbjct: 301 EKMSKSVGNVIDPVALIQAYGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+  G++P PG F ++D  +L+    +L  +R +   Q +H AL  +  +
Sbjct: 361 LAQRSLSMVAKNLGGVVPEPGEFCDADTELLATADGLLDRVRAHFDRQAMHLALEAIWLM 420

Query: 421 VSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + + ++YF  Q+PW L+K+    +  R  T LY T EV+R  A+L+Q  +P+ A K+ D+
Sbjct: 421 LGDANKYFSTQQPWVLRKSESEADQARFRTTLYTTCEVVRIAALLVQPVMPESAAKMLDL 480

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L   D+ R F ++  RL PG  L      +FPR+
Sbjct: 481 LGQPDDRRAFSAVGTRLAPGTQLP-PPTGVFPRY 513


>gi|23097501|ref|NP_690967.1| methionyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|25009346|sp|P59079|SYM_OCEIH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|22775724|dbj|BAC12002.1| methionine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 673

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 213/523 (40%), Positives = 323/523 (61%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+ + HIG+AY  I  DV+AR+ R+ G DV + TG+DEHGQKI +
Sbjct: 1   MARENAFYITTPIYYPSGKLHIGNAYTTIACDVMARYKRMRGFDVFYLTGSDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   ++ K +VD  +   + + + L+IS D FIRTTE++H      ++++  ++GDIY
Sbjct: 61  KAKEMNISPKAYVDDMAEGMKKLWNTLEISNDKFIRTTEEQHKKVVADIFERFLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYY----NAQHNPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE +Y + +   V +  DG           +PV+ ++EE YFFR+S Y 
Sbjct: 121 LDEYEGWYSVPDETFYTETQLEDVERDDDGNVIGGKSPDSGHPVELIKEESYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL +YE +PEFI P  R+NE+I+   K GL+DL++SR TF WG+++P +P++++YVWI
Sbjct: 181 DRLLKFYEDNPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFSWGVQVPSNPKHVVYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DALTNY+T  GY         KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+
Sbjct: 241 DALTNYITALGYGSEDTSLYDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKVFA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+ P  ++E  G+DALRY+L+RE+A G DG +  +    RVN 
Sbjct: 301 HGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMREVAFGSDGVFTPEDFISRVNY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K +DG +P   G  T  D  + +  +  ++E  ++M+     
Sbjct: 361 DLANDLGNLLNRTVAMINKYFDGKVPEFKGEVTSFDGELQTTANNAVKEYEKHMEGMQFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL QV  L+S  ++Y D  +PW + K    R   ++V+    E +   A++LQ F+   
Sbjct: 421 DALKQVWILISRANKYIDETEPWIVAKDEGRRNELASVMVHLAESLHAAALMLQPFLTHA 480

Query: 470 ANKIFDILFVADE-NRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             KI + L + +E    + ++          + K   PIFPR 
Sbjct: 481 PKKIAEQLGLGEEYGLDWGTIGFGNFPENTTVVKKGTPIFPRL 523


>gi|302873184|ref|YP_003841817.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688651|ref|ZP_07631097.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576041|gb|ADL50053.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 643

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 209/513 (40%), Positives = 320/513 (62%), Gaps = 8/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  YI+T I YP+A+ HIG+ Y  + AD LAR+ RL G DV+F TGTDEHGQKI +
Sbjct: 1   MSNEKTYYITTPIYYPSAKLHIGNTYTTVAADALARYKRLTGYDVMFLTGTDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT K +VD+     +D+  +++ISYD FIRTT+  H  T + ++K++ D+GDIY
Sbjct: 61  IAEEKGVTPKDYVDEIVAGIQDLWKLMNISYDKFIRTTDDYHKKTVQKIFKQLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E+++ D +   G           PV+  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KGAYEGWYCTPCESFWTDTQAVDGK----CPDCGRPVETAKEEAYFFKMSKYADRLIEYI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E+HPEFI P  R+NE+++   + GL+DL +SR TF WGI +  DP +++YVW+DAL+NY+
Sbjct: 177 ETHPEFIQPESRKNEMLNNFLRPGLQDLCISRTTFTWGIPVEFDPDHVVYVWMDALSNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  G+  + D    K+WP D+H++GKDI+RFH IYWP FL++    LPK+VF HG++L  
Sbjct: 237 SALGFDSDNDQLYKKYWPCDVHLVGKDIIRFHTIYWPIFLMALGQELPKQVFGHGWLLVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP+ ++   G DA+RY+L+ EI  G DG ++ +   K+VN+DLAN +G
Sbjct: 297 GGKMSKSKGNVVDPVVLVNHFGTDAVRYYLLHEIPFGSDGNFNSEIFIKKVNSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +M++K +DG+I  P    + D  ++++   + +++   +    + +AL ++ +
Sbjct: 357 NLLSRTTAMVIKYFDGVIQPPTDKEDIDNELINIALDMPKKVEAAINELNLPQALDEIWT 416

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K      R  TVLY  +E +R  ++ + +F+P+   KI + L
Sbjct: 417 LIRRANKYIDETTPWILAKDEDKKARLGTVLYNLIEALRFASVAVSSFLPETGTKIQEQL 476

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V        S     + G  L K  D IFPR 
Sbjct: 477 KVDVATWDSISAFDGTQAGVTLEK-GDVIFPRI 508


>gi|194467624|ref|ZP_03073611.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454660|gb|EDX43557.1| methionyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 675

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 314/520 (60%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLMGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  + +VDQ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIYK
Sbjct: 63  AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EEE YFF++S Y D 
Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+I+   K GL+DL+++R +F WG+K+P DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFTWGVKVPSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK +  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHIIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +G  + T  A T+ D  +    S V+ E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLLGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K +  +   S V+    + +R +A L+Q  +P    
Sbjct: 423 LAAVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLRIIAALIQPIMPNAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +I + L +   +     L          +     PIFPR 
Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522


>gi|323140336|ref|ZP_08075268.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415194|gb|EFY05981.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 653

 Score =  470 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 220/511 (43%), Positives = 314/511 (61%), Gaps = 7/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+   HIGHAY   IAD LARFHRL G DV F TG+DEHG KI + A
Sbjct: 2   TKPSYYITTPIYYPSDNLHIGHAYCTTIADSLARFHRLKGEDVFFLTGSDEHGLKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT   +VD    NF+ +   L+IS +DFIRT+++RHH   +   +KI ++GDIYK 
Sbjct: 62  KEKGVTPIQYVDAIIANFKLLWKELNISNNDFIRTSQERHHKVVQDALQKIYEQGDIYKK 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E+Y+ + ++    +       H PV+ MEEE YFF++S YQD  L + E 
Sbjct: 122 NYKGLYCVPCESYWLERQLD---ENHCCPDCHRPVEEMEEESYFFKMSKYQDWWLQFIEE 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P  RRNE+I+FVK GL+DL ++R TFDWGI +P D ++++YVW DAL NYLT  
Sbjct: 179 HPDFIQPASRRNEMINFVKQGLEDLCITRTTFDWGIPVPFDKKHVVYVWFDALLNYLTGI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            Y  +      K+WPA LH++GK+I+RFH I WP  L +  L +P++V+ HG+++  G+K
Sbjct: 239 KYGTDDAF-FHKYWPASLHLVGKEIVRFHTIIWPIMLHAMGLEMPQEVYGHGWLVVDGDK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP+ +I+E G DA+RYFL+REI  G DG + +D L  RVNADLAN +GNL+
Sbjct: 298 MSKSKGNVIDPLGLIDEFGADAIRYFLLREINLGSDGNFSRDALITRVNADLANDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+VSMI K + G++   GA    D+ + ++    +    + M N  I+ A+  V +L+S
Sbjct: 358 HRTVSMIEKYHGGIVADTGASEPIDDELKALVKETVANYVKAMDNMEINTAIKGVWALIS 417

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR  TV+Y   E +R +AIL+  ++P  + KI+  L +A
Sbjct: 418 RANKYIDETAPWILAKDEAKADRLKTVMYNLAETLRIVAILISPYIPTTSPKIYTQLGLA 477

Query: 481 -DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             E       +             +P++PR 
Sbjct: 478 VPEQFLLADAEWGGLANGTKVCKGEPLYPRI 508


>gi|304391677|ref|ZP_07373619.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295906|gb|EFL90264.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 513

 Score =  470 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 263/509 (51%), Positives = 355/509 (69%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+TAI+YPN  PHIGHAYE I AD +ARF RLDG DV F  GTD HGQK+ + A++
Sbjct: 3   QKYYITTAISYPNGAPHIGHAYEFICADAIARFKRLDGYDVRFQIGTDVHGQKMFQTARD 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   D+NS  F+ M +   IS+D FIRT+++ HH   + +W  +   GDIYK  Y
Sbjct: 63  LGITPKELADKNSDAFQSMTEHYGISWDRFIRTSDEDHHRASQAIWSAMEANGDIYKDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWYS+RDEAYY +DE     DG+    Q +PV+W+EEE YFFRLSAY DKLL+ ++  P
Sbjct: 123 AGWYSVRDEAYYEEDETRLTEDGKRLGPQGSPVEWVEEESYFFRLSAYGDKLLALFDEQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  R+NE++SFVK GL+DLS+SR TFDWG+K+P D +++MYVW+DALTNYLT  GY
Sbjct: 183 DFIAPASRKNEIVSFVKGGLRDLSISRTTFDWGVKVPGDDKHVMYVWVDALTNYLTGAGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D        +WPADLHVIGKDI RFHA+YWPAFL+SA + LPK+V+ HGF+L  GEK+S
Sbjct: 243 PDTES-ELWSYWPADLHVIGKDITRFHAVYWPAFLMSAGIDLPKRVYGHGFLLANGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP+++  E G+DA+RY+  R +  G DG Y  D +    NADLAN  GNL  R
Sbjct: 302 KSLGNVADPMDLAAEYGIDAMRYYCQRLVRFGSDGSYSHDDIVNHTNADLANNFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K+ DG +   GAFTE+D ++L+    +L   R+ +   + + AL  + + +   
Sbjct: 362 SLSMIFKNCDGKLDGAGAFTEADTALLATADGMLAPCRDAIDRTVPNEALDAIWATLDAA 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYFD Q PW LKKT+P+R +TVLYVT EV+RQ++IL+QAF+P+ A K+ D L + ++ R
Sbjct: 422 NRYFDEQAPWGLKKTDPERMATVLYVTAEVVRQVSILVQAFLPESAEKLLDQLKIPEDQR 481

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D RL    ++ K  + +FPR++
Sbjct: 482 DFAYLGGDNRLDTATVIEKP-EGVFPRYV 509


>gi|163791030|ref|ZP_02185451.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873675|gb|EDP67758.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 675

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 213/523 (40%), Positives = 321/523 (61%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG+AY  I  DV+AR+ R+   DV + TG+DEHGQKI  
Sbjct: 1   MTEKKTFYITTPIYYPSGKLHIGNAYSTIACDVMARYKRMQDFDVFYLTGSDEHGQKIEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ   +T + +VD+ ++  +++ ++L+IS D FIRTT+  H      ++++   +GDIY
Sbjct: 61  KAQELNITPQEYVDEMAKGMQNLWELLEISNDKFIRTTDPIHEKVVADIFERFLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y 
Sbjct: 121 LDEYEGWYSVPDETFYTETQLVDVERDAEGTIIGGKSPDSGHPVELIKEESYFFRMSKYA 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL+YY  HP+FI P  R+NE+I+   K GL+DL++SR TF WG+K+P +P++++YVWI
Sbjct: 181 DRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKHVIYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+T  GY  +      KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F 
Sbjct: 241 DALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+ P  ++E+ G+DALRY+L+RE+  G DG +  +    RVN 
Sbjct: 301 HGWLLMKEGKMSKSKGNVVYPEMLVEQYGLDALRYYLMREVTFGSDGVFTPEDFVSRVNY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+++MI K +DG +P   G  TE D  +     +V    +E M+N    
Sbjct: 361 DLANDLGNLLNRTIAMINKYFDGKVPDYTGNVTEFDAVLKETAEKVCTNYQEEMENMQFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ V  L+S  ++Y D   PW+L K    +   ++V+    E +R  AILLQ F+   
Sbjct: 421 SALSHVWVLISRANKYIDETAPWKLAKEEDQKNELASVMVHLAETLRISAILLQPFLTHA 480

Query: 470 ANKIFDILFVADENR-CFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             ++F  L V  E    + ++          + K   PIFPR 
Sbjct: 481 PKEVFAQLGVEGEFAGDWSTIQFGSFPTNTTVIKKGTPIFPRL 523


>gi|167629315|ref|YP_001679814.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592055|gb|ABZ83803.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 668

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 223/518 (43%), Positives = 322/518 (62%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   YI+T I YP+  PHIGHAY  +  D +AR+ RL G DV F TG DEHGQKI +AAQ
Sbjct: 6   RPTFYITTPIYYPSGNPHIGHAYTTVATDTMARYKRLRGCDVWFLTGLDEHGQKIERAAQ 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+    ++D  +  F+ + + L+I+YDDFIRTTE+RH    +++++KI DKGDIYK  
Sbjct: 66  GKGMAPIDYLDPVAVTFKKLWERLEITYDDFIRTTEERHKKAVQVIFQKIWDKGDIYKSE 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y GWY    EA++ + ++  G  G+        PV+ M+EE YFFR+S Y D+LL + E 
Sbjct: 126 YEGWYCTPCEAFWPERQLKIGEKGEKLCPDCDRPVERMKEESYFFRMSKYADRLLQHIEE 185

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +PEFI P+ RRNE++SF+K GL+DL +SR TF WGI +P +  +++YVW DAL+NY+T  
Sbjct: 186 NPEFIQPVSRRNEMVSFIKQGLEDLCVSRTTFKWGIPVPINANHVIYVWFDALSNYITAL 245

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + D    ++WPAD+H++GKDI+RFH I WP  L++   PLPK+VFSHG+ L +  K
Sbjct: 246 GYGSDDDEKYRRYWPADIHLVGKDIVRFHTIIWPIILMALGEPLPKQVFSHGWFLLESGK 305

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP  + +  GVDA RYFL+RE+  G+D  + ++ L  R+N DLAN +GNL+
Sbjct: 306 MSKSKGNVVDPFMLADRYGVDAFRYFLIREMIGGQDALFSEETLISRINTDLANDLGNLL 365

Query: 363 SRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            RS+SM+ +   G++  P A  E   ++ I  + ++ + +    M    +  A + +  L
Sbjct: 366 HRSLSMVERFSGGIVRAPEAAAEGPLEKEIRELTAKTVADFGALMDRFELANAHSALWKL 425

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  +++Y D + PW L K          VLY  VE +R  AILLQA +P +A KIF  L 
Sbjct: 426 IGRMNKYIDERAPWSLAKKPEAKAELEAVLYTMVESLRITAILLQAAMPNVAGKIFAQLG 485

Query: 479 VADENR------CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++ ENR       + +    L P  +     DPIFPR 
Sbjct: 486 LSGENRPASCLMTWDAARWGLFPDGVKVAKGDPIFPRI 523


>gi|254820391|ref|ZP_05225392.1| methionyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 514

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 250/511 (48%), Positives = 355/511 (69%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++TAI YPN  PHIGHAYE +  D +ARF RLDG DV F TGTDEHG K+ + A  
Sbjct: 2   RPYYVTTAITYPNGDPHIGHAYEYVATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+ T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W++++  GDIY   Y
Sbjct: 62  EGIGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKEIWRRMAAAGDIYLDTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E     DG     +   PV W EE+ YFFRLSAY DKLL++YE++
Sbjct: 122 SGWYSVRDERFFVESETRLLDDGTRVAVETGAPVTWTEEQTYFFRLSAYADKLLAHYEAN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV  GL+DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT  G
Sbjct: 182 PDFIAPEVRRNEVVSFVAGGLRDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGVG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+
Sbjct: 242 YPDTDSEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +IEE GVD +RYFL+RE+  G+DG + ++ +  R+N DLAN +GNL  
Sbjct: 302 SKSVGNVVDPVALIEEFGVDQVRYFLLREVPFGQDGSFSEEAIITRINTDLANELGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+  G++P PG FT +D  +L+    +L+ +R + ++Q +H AL  +  ++ E
Sbjct: 362 RSLSMIAKNLGGVLPEPGEFTAADTELLATADGLLERLRASFESQAMHLALEAIWLMLGE 421

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K+    +  R  TVLYVT E +R  A+L+Q  +P+ A  + D+L  
Sbjct: 422 ANRYFSAQQPWVLRKSESEADQQRFRTVLYVTCEAVRIAALLVQPVMPESAGTLLDLLGQ 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A + R F +L  RL PG +L      +FPR+
Sbjct: 482 AQDQRTFAALGARLTPGTVLP-PPTGVFPRY 511


>gi|170744506|ref|YP_001773161.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198780|gb|ACA20727.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 515

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 269/510 (52%), Positives = 364/510 (71%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  I+TAI+YPN  PHIGHAYE+I AD +ARF R+DG DV FTTGTDEHG KI + A  
Sbjct: 4   ERFTITTAISYPNGAPHIGHAYEVIAADAIARFKRIDGYDVFFTTGTDEHGLKIQQTAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++ + FVD  +  FR MA+ L+  +D FIRTT+  H  + + LW+++   GDIY   Y
Sbjct: 64  AGISPRAFVDAMAPRFRTMAETLNCGFDRFIRTTDPDHIASSQALWRRMEAAGDIYLAKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +GWYS+RDEAYY++ E+  G DG     +   PV+W+EEE YFFRLSAY D+LL++Y  H
Sbjct: 124 AGWYSVRDEAYYDEAELVLGQDGVRRAERTGTPVEWVEEESYFFRLSAYADRLLAHYAEH 183

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV+SGL+DLS+SR TFDWG+ +P  P ++MYVW+DALTNY+T+ G
Sbjct: 184 PDFIGPETRRNEVVSFVRSGLQDLSVSRTTFDWGVPVPGAPGHVMYVWVDALTNYITSCG 243

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D  + + WPADLHVIGKDI+RFHA+YWPAFL+SA +PLP++VF HGF+L +GEK+
Sbjct: 244 FPDEADP-RWRRWPADLHVIGKDIIRFHAVYWPAFLMSAGVPLPRRVFGHGFLLSRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DPI +    GVD LRYF++RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 303 SKSLGNVVDPIALAGLYGVDPLRYFVLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++MI ++ DG +P PG   E+D +IL+    +    R  M++  +H ALA++ ++V+E
Sbjct: 363 RSLTMIARNCDGAVPRPGDLAEADRAILAAADALPAVARAAMEDYALHHALAEIWAVVAE 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF AQ+PW L+KT+P R +TVLY T E +R + IL+Q FVP  A ++ D+L V  E 
Sbjct: 423 ANRYFAAQEPWTLRKTDPARMATVLYCTAETLRAVGILVQPFVPAAACRLLDLLAVPGEA 482

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           R    + +  RL PG  L     PIFPRF+
Sbjct: 483 RGLAQVGEGGRLVPGTALPAP-SPIFPRFV 511


>gi|199597844|ref|ZP_03211270.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258509579|ref|YP_003172330.1| methionyl-tRNA synthetase/ protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|199591280|gb|EDY99360.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257149506|emb|CAR88479.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|259650846|dbj|BAI43008.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 660

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 210/521 (40%), Positives = 321/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++ +LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW+L K     D+  +V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 VQIFGQLGLDHENEDHKVVKWGALPAGAKVVEQGTPIFPRL 521


>gi|154499613|ref|ZP_02037651.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
 gi|150271691|gb|EDM98935.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
          Length = 656

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 207/518 (39%), Positives = 305/518 (58%), Gaps = 13/518 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K YI+T I YP+ + HIGHAY  +  DV+AR+ RL G DV+F TGTDEHGQKI  
Sbjct: 1   MSNKGKYYITTPIYYPSDKLHIGHAYCTVATDVMARYKRLTGYDVMFLTGTDEHGQKIED 60

Query: 61  AAQNAGVTTKVFVDQNSRNFR---DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            A++AGVT K +VD      R   D+  +++IS D FIRTT+  H    + ++K++ ++G
Sbjct: 61  KAKDAGVTPKQYVDNIVEGERGVLDLWKLMNISNDRFIRTTDDYHEAAVQKIFKQLYEQG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           DIYKG Y G Y    E+++ + ++  G            VQ  EEE YFFRLS Y D  +
Sbjct: 121 DIYKGTYKGKYCKPCESFWTESQLVDGK----CPDCGREVQDAEEEAYFFRLSKYAD-RI 175

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
                + +F+ P  R NE+++   K GL+DL +SR +F WG+ +  DP +++YVWIDAL+
Sbjct: 176 QDLLENTDFLEPRSRVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDFDPGHVVYVWIDALS 235

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY ++      KFWPAD+H +GK+I+RFH+I WPA L++ NLPLPKKVF HG++
Sbjct: 236 NYITALGYDNDKYNDYDKFWPADVHFVGKEIVRFHSIIWPAILMALNLPLPKKVFGHGWL 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV+DP  + E  GVDALR+FL+R    G DG +  + L   +N DLAN
Sbjct: 296 LLDGGKMSKSKGNVVDPYLLSERYGVDALRFFLLRTFPFGSDGNFSNEALIGTINTDLAN 355

Query: 357 GIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL+SR+VSM+ K ++ G +P        D+ ++++ S +  +    M+      AL+
Sbjct: 356 DLGNLLSRTVSMVGKYFEGGTLPAEQTADGLDDELIALASGLRDKYEAAMERFAFQDALS 415

Query: 416 QVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V  L+S  ++Y D   PW L +   N  R + V+Y  +E +R  A+LL  F+P  + +I
Sbjct: 416 EVFKLISRANKYIDETAPWVLARDEANKPRLARVMYNLLESLRISAVLLTPFMPDTSAEI 475

Query: 474 FDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
              +        ++S                D +FPR 
Sbjct: 476 LRQIGACPCCSQWESAGKWGSLSATATVSRGDNLFPRI 513


>gi|329113410|ref|ZP_08242191.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697235|gb|EGE48895.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 512

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 239/507 (47%), Positives = 340/507 (67%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y++T I Y N  PHIGHAY  I ADV+ARFHRL G +V F TGTDEHGQK+ +AAQ 
Sbjct: 3   RRFYVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K F D+ S +FR+MAD ++ISYDDFIRTTE RH  + + LWKK++D G IY G Y
Sbjct: 63  NGIDAKSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY+LRDE +Y +DE+  G DG+       PV+W++E  YFF+LS YQD+LL  YE++P
Sbjct: 123 EGWYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P   RNE++SFVK GL+DLS+SR +F WGI +P D +++MYVW DAL NYL+  GY
Sbjct: 183 DFLGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSALGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D      A FWPA+LH++GKDI RFHA+YWPAFL++A + LP+KVF++G+   +G+K+S
Sbjct: 243 PDTSAPRMA-FWPANLHLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWWTIEGQKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP ++++E G+DA+R+FL+RE+  G D    +  L  R N +LAN +GNL  R
Sbjct: 302 KSLGNVVDPRDLVKEFGLDAVRFFLLREVPFGGDSDLSRKALIMRNNVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S++ ++  G++P     TE D  +L     +   ++  ++   +  AL  V  ++   
Sbjct: 362 TLSLVARNCGGVLPERRTLTEEDTHLLGQVMVLPDLLKSQIERCALTDALEDVWKVIRAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW L+KT+P+R   VL V V+ +R +A +LQ F+P+   ++ D L V  E R
Sbjct: 422 NAYIDHQAPWALRKTDPERMKDVLRVLVDALRGIATMLQPFMPQSMERMLDQLSVTAEER 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F +L+  L  G  L      IFPR++
Sbjct: 482 SFAALETPLPGGRQLPAP-QGIFPRYV 507


>gi|299536738|ref|ZP_07050048.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727852|gb|EFI68417.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 658

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 219/516 (42%), Positives = 323/516 (62%), Gaps = 11/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI + 
Sbjct: 3   EQQKTFYITTPIYYPSGKFHIGTAYTTVASDTIARYKRLKGYDVRFLTGMDEHGQKIQEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG   + +V++ +   + +  ++DISYDDFI+TT+ RH      +++K  D GDIYK
Sbjct: 63  AAEAGKHPQDYVNEIADAAKKLWGLMDISYDDFIQTTQDRHTKAVEKIFQKFLDNGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++  G           PV  ++EE YFF +  Y D+LL+YYE
Sbjct: 123 GEYEGWYCTPCESFFTETQLVDGN----CPDCGRPVHKVKEESYFFNMKKYADRLLAYYE 178

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            + EFI P  R+NE+I+   K GL+DLS+SR +FDWGIK+P DP++++YVW+DALTNY+T
Sbjct: 179 ENLEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGDPKHVIYVWVDALTNYIT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL   +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKKVF+HGFI+ K 
Sbjct: 239 ALGYLSEDESLFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKVFAHGFIMMKD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI P  +IE  G+DA RYFL+RE+  G DG +  +   +R N DLAN +GN
Sbjct: 299 GKMSKSKGNVIYPEMLIERYGLDATRYFLLRELPFGSDGVFSPESFIERTNFDLANDLGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R++SMI K +DG+IPT     TE D ++      V  +  E+M+       LA + +
Sbjct: 359 LLNRTISMINKYFDGIIPTENLQPTEFDAALKEQAESVRIKYEESMEKMQFSVVLADLWT 418

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           LVS  ++Y D  +PW L K   D  +   V+    E + Q+A++LQ F+     ++ D L
Sbjct: 419 LVSRTNKYIDETQPWVLAKEESDKPKLGAVMRNLAESLHQIAVMLQPFMTTTPKRMIDQL 478

Query: 478 FVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
            + D+   + +++     +     + +   PIFPR 
Sbjct: 479 GLDDKFLAWDTIETFGNTIPANIKVVEKGIPIFPRL 514


>gi|256848351|ref|ZP_05553794.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714949|gb|EEU29927.1| methionyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 674

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 210/518 (40%), Positives = 311/518 (60%), Gaps = 11/518 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + A
Sbjct: 4   TKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLTGYDVFYLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  + +VDQ +   + +   LDI+ D FIRTT+  H    + +++++ D+GDIYKG
Sbjct: 64  EQLGMKPQEYVDQMATGIKKLWKTLDITNDKFIRTTDDYHERAVQKIFQQLLDQGDIYKG 123

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ +EEE YFF++S Y D L
Sbjct: 124 KYTGWYSVDDEEYFTESQLAEVYRDDNGKVIGGKAPSGHEVQLVEEESYFFKMSKYADWL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YY+ HP+FI P  R NE+++   K GL+DL+++R +F+WG+K+P+DP++++YVWIDAL
Sbjct: 184 MDYYKEHPDFIEPHTRMNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY+T  GY  + +    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG+
Sbjct: 244 SNYITALGYGSDDNRLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  K  K+SKS GNVI P  ++E  G+DA RY+L+R +  G DG +  +    +VN DLA
Sbjct: 304 LTMKDGKMSKSKGNVIYPQTLVERYGLDATRYYLLRAMPFGNDGIFSPEDFVDKVNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K     +  T  A T  D+ +    + VL E  + M       AL
Sbjct: 364 NDLGNLLNRTVAMINKYQGGQVQGTNTAMTPYDQDLEQTAADVLAEYSDLMDQCHFAEAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  L+S V++Y D  +PW L K    +A    V+    + +R +A LLQ  +P    +
Sbjct: 424 ASVWKLISRVNKYIDETEPWVLAKDEDKKAELSDVMTHLAKALRFIAALLQPTMPNAPKE 483

Query: 473 IFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
           I   L +AD       L          + K   PIFPR
Sbjct: 484 ILQQLGLADTEITLNDLSFNDFPTAATVVKKGTPIFPR 521


>gi|312115063|ref|YP_004012659.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220192|gb|ADP71560.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 523

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 253/510 (49%), Positives = 351/510 (68%), Gaps = 1/510 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I+TAI+YPN +PHIGHAYE +  D +ARF RLDG  V F TG DEHG K+ + 
Sbjct: 4   QQKPHYTITTAISYPNGEPHIGHAYEAVATDAMARFKRLDGHPVFFLTGVDEHGLKMKQT 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T     D+N+  F +M + LD+SYDDFIRTTE RHH++   +W+++   GDIY 
Sbjct: 64  AAKEGITPTELADRNTAKFIEMLEQLDVSYDDFIRTTEPRHHESVAEIWRRMEKAGDIYL 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWYS+RDEA+Y + E   G +G     Q  PV+W EE+ YFFRLS Y+ KLL +YE
Sbjct: 124 AGYKGWYSVRDEAFYAESETVLGGNGIRLGPQGTPVEWTEEQTYFFRLSKYEKKLLKFYE 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P FI+P ERRNEV+SFVK GL+DLS+SR T DWGI +PD P +I+YVW+DALTNY+T 
Sbjct: 184 ENPGFIMPAERRNEVVSFVKGGLQDLSISRTTLDWGIPVPDAPGHIIYVWVDALTNYITA 243

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+      +  + WPA +H+IGKDI RFHA+YWPAFL+SA LPLP++VF HGF+ ++GE
Sbjct: 244 AGFPKIRSKAWKERWPAQVHIIGKDITRFHAVYWPAFLMSAKLPLPERVFGHGFLYNRGE 303

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+ P ++++  GVD +RY+ +RE+  G+DG    + +  R+NADLAN +GNL
Sbjct: 304 KMSKSVGNVVAPKDLVDAYGVDQVRYYFLREVPFGQDGNITHEQMVNRINADLANDLGNL 363

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             RS+SMI K+  G IP P     +DE IL+  + +L+  RE +  Q  H+AL  +  +V
Sbjct: 364 AQRSLSMIAKNCAGTIPEPSETDAADEPILAASAALLEANREAIDQQAPHKALDAIWKVV 423

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++ ++YF  Q+PW LKKTNP R  TVL+ T EV+R++AIL Q ++P  + K+ D L VA 
Sbjct: 424 ADTNKYFAVQEPWALKKTNPARMGTVLWTTAEVVRRVAILAQPYMPSSSAKLLDQLGVAA 483

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           E+R F +L   LK G  +  T   +FPR++
Sbjct: 484 EDRSFDALAHTLKAGTKI-ATPQGVFPRYV 512


>gi|328956554|ref|YP_004373940.1| methionine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672878|gb|AEB28924.1| methionine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 674

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 216/523 (41%), Positives = 317/523 (60%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG+AY  I  DV+AR+ R+   DV + TG+DEHGQKI  
Sbjct: 1   MTEKKTFYITTPIYYPSGKLHIGNAYSTIACDVMARYKRMQDFDVFYLTGSDEHGQKIEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ   +T + +VDQ +   + + ++L+IS D FIRTT+  H      ++++   +GDIY
Sbjct: 61  KAQELNITPQKYVDQMAEGMQKLWELLEISNDKFIRTTDPAHEKVVADIFERFLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y GWYS+ DE +Y + ++            G       +PV+ ++EE YFFR+S Y 
Sbjct: 121 LDEYEGWYSVPDETFYTETQLVDIERDDQGNIVGGKSPDSGHPVELIKEESYFFRMSKYS 180

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           D+LL+YY  HP+FI P  R+NE+I+   K GL+DL++SR TF WG+K+P +P++++YVWI
Sbjct: 181 DRLLAYYNEHPDFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVKVPSNPKHVIYVWI 240

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+T  GY  +      KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKK+F 
Sbjct: 241 DALANYITALGYGTDDTSLFDKFWPADVHMVGKEIVRFHTIYWPIMLMALDLPLPKKIFG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L K  K+SKS GNV+ P  ++E+ G+DALRY+L+RE+  G DG +  +    RVN 
Sbjct: 301 HGWLLMKDGKMSKSKGNVVYPEMLVEQYGLDALRYYLMREVTFGSDGVFTPEDFVSRVNY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+++MI K +DG +P   G  TE D  +     +V  + +  M+N    
Sbjct: 361 DLANDLGNLLNRTIAMINKYFDGKVPEYSGNVTEFDTILKETAEKVCVDYQNEMENMQFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL+ V  L+S  ++Y D   PW+L K        ++V+    E +R  AILLQ F+   
Sbjct: 421 SALSHVWVLISRANKYIDETAPWKLAKEEEKTSELASVMVHLAETLRISAILLQPFLTHA 480

Query: 470 ANKIFDILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             +IF  L V  E     S  Q         + K   PIFPR 
Sbjct: 481 PKEIFAQLGVEGEFAGNWSTVQFGSFPENTTVIKKGTPIFPRL 523


>gi|323340524|ref|ZP_08080779.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092068|gb|EFZ34685.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 678

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 208/521 (39%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 3   MAEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGFDVFFLTGTDEHGLKIEE 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   +T + +VD  + + + +   L+IS D FIRTT+  H      +++K+  KGDIY
Sbjct: 63  KAEELNMTPQEYVDSMAESIKKLWKQLEISNDKFIRTTDDYHVKAVEQIFEKLLKKGDIY 122

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    + V+ +EE+ YFF++S Y D
Sbjct: 123 LGKYKGWYSVSDEEYFTESQLAEVYRDENGKMIGGKAPSGHEVELVEEDCYFFKMSKYAD 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY  HP+FI+P  R+NE+++     GL+DL+L+R +F+WG+ +P +P++++YVWID
Sbjct: 183 RLVEYYNEHPDFIMPETRKNEMLNNFINPGLEDLALTRTSFNWGVPVPSNPKHVIYVWID 242

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D    ++WPAD+H++GK+I+RFH IYWP  L++ +LPLPK V  H
Sbjct: 243 ALCNYITALGYGSDDDSLFNRYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHVLGH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVVYPEMIVERYGLDALRYYLIRAVPYGNDGIFTPEDFVNRVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G +P   +  T  D+S+       L+     ++      
Sbjct: 363 LANDLGNLLNRTVAMINKYRGGNVPELVSGVTAFDKSLEDAFEEALKGYESELEQAHFTV 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL ++   VS  ++Y D  +PW L K         +VL      +R +AILLQ  +    
Sbjct: 423 ALEKLWKFVSRTNKYIDETEPWALAKDESKANELDSVLAHLAASLRVIAILLQPVMTHAP 482

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            K+F+ L + +EN   + LD      G  + +   PIFPR 
Sbjct: 483 KKMFEQLGLPEENMDIKGLDFFAFPSGIKVVEKGTPIFPRL 523


>gi|327438102|dbj|BAK14467.1| methionyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 653

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 217/517 (41%), Positives = 331/517 (64%), Gaps = 11/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  + +D +AR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MSEQQTFYITTPIYYPSGKFHIGTAYTTVASDAIARYKRLKGFDVRFLTGMDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ A +  + +V++ +   + + + +DISY+DFI+TTE RH D+   +++K  D GDIY
Sbjct: 61  KAQEANMHPQDYVNEIAEGAKKLWNTMDISYNDFIQTTETRHTDSVEKIFQKFLDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E+YY + ++  G            VQ ++EE YFF +  Y D+LL+YY
Sbjct: 121 KGEYEGLYCVPCESYYTETQLVDGK----CPDCGRDVQKVKEESYFFNMKKYADRLLAYY 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E++PEFI P  R+NE+I+   K GL+DLS+SR +FDWGIK+P +P++++YVW+DAL+NY+
Sbjct: 177 ENNPEFIEPESRKNEMINNFIKPGLEDLSVSRTSFDWGIKVPGNPKHVIYVWVDALSNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T+ GY  + +    K+WPAD+HV+GKDI+RFH IYWP FL++ +LPLPKK+F+HGFI+ K
Sbjct: 237 TSLGYGSDNEELFNKYWPADVHVVGKDIVRFHTIYWPIFLMALDLPLPKKIFAHGFIMMK 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+ P  +IE  G+DA RYFL+RE+  G+DG +  +   +R N DLAN +G
Sbjct: 297 DGKMSKSKGNVVYPEMLIERYGLDATRYFLLRELPFGQDGVFSPESFVERTNFDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+VSM+ K +DG+IPT     T+ DE++      V     E+M        L+++ 
Sbjct: 357 NLLNRTVSMMNKYFDGVIPTENLEATQFDEALKEHAESVRIRYEESMDKMQFSVVLSELW 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           SLVS  ++Y D   PW L K   D  + + V+    E +R +A+++Q F+     +I + 
Sbjct: 417 SLVSRTNKYIDETSPWVLAKDEADHNKLAAVMNNLAESLRHIAVMIQPFMTNAPKQIIEQ 476

Query: 477 LFVADENRCFQSLDQR---LKPGFMLHKTFDPIFPRF 510
           L + +++  + +++     +     + +   PIFPR 
Sbjct: 477 LGLDEKSLQWDTIETFGNVIPKNIKVAEKGTPIFPRL 513


>gi|229551470|ref|ZP_04440195.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258540783|ref|YP_003175282.1| methionyl-tRNA synthetase/protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
 gi|229315153|gb|EEN81126.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257152459|emb|CAR91431.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
          Length = 660

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 209/521 (40%), Positives = 320/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++ +LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K   G++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEGGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW+L K     D+  +V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 VQIFGQLGLDHENEDHKVVKWGALPAGAKVVEQGTPIFPRL 521


>gi|116496032|ref|YP_807766.1| methyonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116106182|gb|ABJ71324.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 660

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 210/521 (40%), Positives = 317/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521


>gi|253680951|ref|ZP_04861754.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562800|gb|EES92246.1| methionine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 646

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 214/510 (41%), Positives = 320/510 (62%), Gaps = 8/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I YP+A+ HIG+ Y  + AD +ARF RL G D  F TGTDEHGQKI + A+
Sbjct: 3   KGNFYITTPIYYPSAKLHIGNTYTTVAADAIARFKRLTGYDTYFLTGTDEHGQKIQRLAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K +VD+     +D+  V+++ YD FIRTT+  H +T + ++KK+ DKGDIYKG 
Sbjct: 63  AKGITPKEYVDEIVSGIKDLWKVMNVKYDKFIRTTDDYHVETVQKIFKKLYDKGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G            V+  +EE YFF++S Y D+L+ Y E+H
Sbjct: 123 YEGLYCTPCESFWTETQLVDGK----CPDCGRAVEKTKEEAYFFKMSKYADRLIEYIETH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            EFI P  R+NE+++   + GL+DL +SR +F+WGI +  D ++++YVWIDALTNY+T  
Sbjct: 179 SEFIQPESRKNEMLNNFLRPGLQDLCISRTSFNWGIPVSFDEKHVIYVWIDALTNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + D    K+WPA++H++GKDILRFH IYWP  L++ +LPLPK+VF HG++L  G K
Sbjct: 239 GYNQDNDELYQKYWPANVHLVGKDILRFHTIYWPIMLMALDLPLPKQVFGHGWLLVDGGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++   G DA+RY+L+ EI  G+DG Y  +   K+ N+DLAN +GNLV
Sbjct: 299 MSKSKGNVVDPVTLVNHFGTDAVRYYLLHEIPFGQDGMYTSETFIKKTNSDLANDLGNLV 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K +DG+IP P A  + D+ ++ V   + + +   M    I  AL ++ +LV 
Sbjct: 359 NRTIAMINKYFDGVIPAPTAKDDIDDELIKVALEIPERVERKMDLLKIPEALDEIWTLVR 418

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     +R  TVLY  VE +R ++++L AF+P+ + KI   L V 
Sbjct: 419 RSNKYIDETMPWALAKEEDKKERLGTVLYNLVESLRIVSVILSAFLPETSKKINAQLNVQ 478

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                  +     K G  + +    IFPR 
Sbjct: 479 LATWDSIASFDGTKAGTKVGEAV-AIFPRI 507


>gi|183984451|ref|YP_001852742.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M]
 gi|183177777|gb|ACC42887.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M]
          Length = 518

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 246/510 (48%), Positives = 348/510 (68%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+AA  
Sbjct: 2   KPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQAAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A + T     +NS  F+ M + L+IS+D FIRTT+  H++  + +W+++   GDIY   Y
Sbjct: 62  AEIPTAQLARRNSDVFQRMQEALNISFDRFIRTTDADHYEASQEIWRRMDAAGDIYLDSY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++YE++P
Sbjct: 122 SGWYSVRDERFFVESETQVVDGTRIATETGTPVTWTEEQTYFFRLSAYADKLLAHYEANP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFV  GLKDLS+SR +F+WG+ +P  P ++MYVW+DALTNYLT  GY
Sbjct: 182 DFIAPEVRRNEVVSFVSGGLKDLSVSRTSFNWGVPVPGHPDHVMYVWVDALTNYLTGAGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D    +  ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ ++GEK+S
Sbjct: 242 PDTGSEAFLRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRVFAHGFLHNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDP+ +IE  GVD +RYFL+RE+  G+DG Y ++ +  R+N DLAN +GNL  R
Sbjct: 302 KSLGNTIDPMGLIETYGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K+  G +P PG F+ +D  +L++   +L+ +RE+  NQ +H AL  +  ++   
Sbjct: 362 SLSMIAKNLGGAVPEPGEFSAADRELLAIADGLLERVREHFDNQSMHLALEAIWLMLGHA 421

Query: 425 DRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++YF  Q+PW L+K+    +  R  T LY T E +R  A+L+   +P+ A K+ D+L   
Sbjct: 422 NKYFSDQQPWVLRKSESEADQARFRTTLYTTCEAVRIAALLVAPVMPESAAKLLDLLGQG 481

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R F ++  RL PG  +      +FPR+
Sbjct: 482 PDQRSFNAIGARLVPGTAMPSP-TGVFPRY 510


>gi|191639512|ref|YP_001988678.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|190713814|emb|CAQ67820.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|327383610|gb|AEA55086.1| Methionyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386801|gb|AEA58275.1| Methionyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 660

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 210/521 (40%), Positives = 317/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521


>gi|148543447|ref|YP_001270817.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152856|ref|YP_001841197.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227363597|ref|ZP_03847714.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325681791|ref|ZP_08161310.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530481|gb|ABQ82480.1| methionyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224200|dbj|BAG24717.1| methionyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071393|gb|EEI09699.1| methionyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978882|gb|EGC15830.1| methionine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 675

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 205/520 (39%), Positives = 314/520 (60%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG++Y  I  D  ARF RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNSYTTIACDAEARFKRLMGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  + +VDQ +   +++   L+I+ D FIRTT+  H    + +++++ D+GDIYK
Sbjct: 63  AEKLGMKPQEYVDQMAAQIKELWKKLEITNDKFIRTTDDYHEKAVQKIFQQLLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EEE YFF++S Y + 
Sbjct: 123 GKYTGWYSVDDEEYFTESQLAEVYRDEDGNVIGGKAPSGHEVQLVEEESYFFKMSKYANW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+I+   K GL+DL+++R +F+WG+K+P DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPQSRMNEMINNFLKPGLEDLAVTRTSFNWGVKVPSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK +  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHIIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNVI P  +++  G+DA RY+L+R +  G DG +  +    +VN DL
Sbjct: 303 WLTMRDGKMSKSKGNVIYPETLVDRYGLDATRYYLLRAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  +G +  T  A T+ D  +    S V+ E +E M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQNGKLVGTNDATTDFDADLEQTASDVIAEYKELMDKTRFAEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V  LVS  ++Y D  +PW L K +  +   S V+    + +  +A L+Q  +P    
Sbjct: 423 LATVWKLVSRANKYIDETEPWVLAKDDSKKDVLSDVMTHLAKSLWIIAALIQPIMPHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +I + L +   +     L          +     PIFPR 
Sbjct: 483 QIVEQLGIEGTDLSLTDLQFNDFPAEAQVVAKGTPIFPRL 522


>gi|73663575|ref|YP_302356.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582280|sp|Q49UZ9|SYM_STAS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72496090|dbj|BAE19411.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 658

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 218/520 (41%), Positives = 325/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY     DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYTTTAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG +   ++D+     +D+   L+IS DDFIRTTE RH +  + +++++  +GDIY G 
Sbjct: 63  KAGKSEIEYLDEMIAGIKDLWGKLEISNDDFIRTTEIRHKEVVQQIFERLLAQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF LS Y D+LL
Sbjct: 123 YEGWYSVPDETYYTETQLVDPIMENGVIVGGKSPDSGHEVELVKEESYFFNLSKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +PEFI P  R+NE+I+   K GL+DL++SR +FDWGI++  +P++++YVWIDAL 
Sbjct: 183 EFYDENPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGIRVQSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ ++PLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDDSLFKKYWPADIHIMAKEIVRFHSIIWPILLMALDIPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I   G+DA RY+L+RE+  G DG +  +G  +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLINRYGLDATRYYLMRELPFGSDGVFTPEGFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E D+ +  +    ++   ENM +     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPKHELDKDMEQMALDTVKTFHENMDDLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +S  ++Y D   PW L K    +     V+   VE IR +A+LL+ F+     +I
Sbjct: 423 TIWKFISRTNKYIDETSPWVLAKDEDQKEMLGNVMAHLVENIRIIAVLLRPFLTHAPKQI 482

Query: 474 FDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           F  L + A E    +S++Q   L    M+    +PIFPR 
Sbjct: 483 FSQLNINAPELFELESIEQYGALTEPIMVSGKPEPIFPRL 522


>gi|258542241|ref|YP_003187674.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633319|dbj|BAH99294.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636378|dbj|BAI02347.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639431|dbj|BAI05393.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642487|dbj|BAI08442.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645542|dbj|BAI11490.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648595|dbj|BAI14536.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651648|dbj|BAI17582.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654639|dbj|BAI20566.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 512

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 239/507 (47%), Positives = 339/507 (66%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y++T I Y N  PHIGHAY  I ADV+ARFHRL G +V F TGTDEHGQK+ +AAQ 
Sbjct: 3   RRFYVTTPIYYVNGAPHIGHAYTSIAADVMARFHRLAGDEVFFLTGTDEHGQKVEQAAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   K F D+ S +FR+MAD ++ISYDDFIRTTE RH  + + LWKK++D G IY G Y
Sbjct: 63  NGTDAKSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY+LRDE +Y +DE+  G DG+       PV+W++E  YFF+LS YQD+LL  YE++P
Sbjct: 123 EGWYALRDECFYGEDELVPGPDGKKVAPTGAPVEWVKEPSYFFKLSEYQDRLLELYENNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P   RNE++SFVK GL+DLS+SR +F WGI +P D +++MYVW DAL NYL+  GY
Sbjct: 183 DFLGPHGARNEIVSFVKQGLRDLSISRTSFKWGIPVPGDDKHVMYVWFDALANYLSALGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D      A FWPA+LH++GKDI RFHA+YWPAFL++A + LP+KVF++G+   +G+K+S
Sbjct: 243 PDTNAPRMA-FWPANLHLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWWTIEGQKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP ++++E G+DA+R+FL+RE+  G D    +  L  R N +LAN +GNL  R
Sbjct: 302 KSLGNVVDPRDLVKEFGLDAVRFFLLREVPFGGDSDLSRKALIMRNNVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S++ ++  G++P     TE D  +L     +   ++  ++   +  AL  V  ++   
Sbjct: 362 TLSLVARNCGGILPERRELTEEDTHLLGQVMVLPDLLKSQIERCALTDALEDVWKVIRAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW L+KT+P+R   VL V V+ +R +A +LQ F+P+   ++ D L V  E R
Sbjct: 422 NAYIDHQAPWALRKTDPERMKDVLRVLVDALRGIATMLQPFMPQSMERMLDQLAVTAEER 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F +L+  L  G  L      IFPR++
Sbjct: 482 SFAALEMPLPGGRQLPAP-QGIFPRYV 507


>gi|116333117|ref|YP_794644.1| methyonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098464|gb|ABJ63613.1| methionyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 677

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 203/521 (38%), Positives = 304/521 (58%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+T I YP+ + HIG++Y  I  D +AR+ R +G DV F TGTDEHG KI  
Sbjct: 1   MADKPSFYITTPIYYPSGRLHIGNSYTTIACDTVARYKRSNGYDVFFLTGTDEHGLKIED 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T + +VD  +   + +   L+IS D FIRTT+  H    + ++ ++  +GDIY
Sbjct: 61  KAKAQNQTPQEYVDGMATGIKQLWKTLEISNDKFIRTTDHEHVAAVQAIFDRLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE---VYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS  DE Y+ + +   VY+ ADG+    Q    + V  ++E+ YFF++S Y D
Sbjct: 121 LGEYEGWYSEDDEEYFTETQLAKVYRDADGKMIGGQAPSGHDVSLVKEQSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL +Y SHP FI P  R  E+I+   K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 WLLDFYHSHPHFIQPESRMTEMINNFIKPGLEDLAVSRTTFSWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + DG   KFWPAD+ ++GK+I+RFH+IYWP  L +  L +PK++F+H
Sbjct: 241 ALLNYITALGYTSDDDGLFKKFWPADVQMVGKEIVRFHSIYWPIVLHALGLEMPKELFAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNVI P  +++  G+DALRY+L+R +  G DG +  +    R+N D
Sbjct: 301 GWLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLMRAMPYGNDGVFSPEDFVDRLNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G +P   A  TE D  + +  + V+    + M       
Sbjct: 361 LANDLGNLLNRTVAMINKYEGGQLPQYQAGVTEFDADLEATAAAVITNYHDLMNQMHFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ALA++  LV+  ++Y D  +PW+L K +      + V+      +R +A L+   +    
Sbjct: 421 ALAEIWKLVARSNKYIDETEPWKLAKDDSKATELAAVMAHLAASLRVIATLISPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            +IFD L +         L    L  G  +     PIFPR 
Sbjct: 481 KEIFDQLGLDVATLTMTDLALADLPAGKQVVAKGTPIFPRI 521


>gi|315301039|ref|ZP_07872357.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630592|gb|EFR98407.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 664

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 339/522 (64%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++ ++GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVAKIFEQLVEQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +   +EVYK   G+    +    N V+ ++EE YFFR+S Y D+
Sbjct: 124 GEYEGWYSVSDEEYFTETQLEEVYKDESGKVIGGKAPSGNEVELVKEESYFFRMSKYADR 183

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L+ YY SHPEFILP  R+NE+I+   K GL+DL++SR TFDWGIK+P +P++++YVWIDA
Sbjct: 184 LVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSRTTFDWGIKVPGNPKHVVYVWIDA 243

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPK VF HG
Sbjct: 244 LSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIMLMALDLPLPKMVFGHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG +  +    RVN DL
Sbjct: 304 WILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K ++G IP   G  T  D++++   + V+ +  ++M +     A
Sbjct: 364 ANDLGNLLNRTVAMINKYFNGEIPAYQGDVTPFDKTLVDFKNSVVLDYEKSMDHMQFSVA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLAN 471
           L Q+ SL+S  ++Y D      L K    RA  ++V+    E +R +A+LLQ F+ +   
Sbjct: 424 LNQLWSLISRTNKYIDETAXXALAKEEEKRAELASVMTHLAENLRIIAVLLQPFLTRTPG 483

Query: 472 KIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 484 EIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 525


>gi|239630434|ref|ZP_04673465.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067585|ref|YP_003789608.1| methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|239526717|gb|EEQ65718.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439992|gb|ADK19758.1| Methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 660

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 210/521 (40%), Positives = 317/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDKDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+F+ P  R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHPDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 521


>gi|293399763|ref|ZP_06643909.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306163|gb|EFE47406.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 656

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 211/515 (40%), Positives = 321/515 (62%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI+TAI Y + +PHIG+ YE+++ D +AR+ R  G DV F TGTDEHGQKI + A
Sbjct: 6   KKGKYYITTAITYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKA 65

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD+ +   R   D+++ SYD F+RTT++ H    + ++KK+ ++GDIYKG
Sbjct: 66  KEAGVTPKEFVDKVADIVRKNFDMMNTSYDYFVRTTDEGHERQVQKIFKKLYEQGDIYKG 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PVQ   EE YFF L  Y  KL+ + E 
Sbjct: 126 KYEGMYCTPCESFWTESQLIDGK----CPDCGRPVQKATEEAYFFNLQKYAPKLIKHIEE 181

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+I+   K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T+
Sbjct: 182 HPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITS 241

Query: 242 TGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + +   +  K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L  
Sbjct: 242 LGYDADGNHGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVG 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +R+N+DLAN +G
Sbjct: 302 DGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERINSDLANVLG 361

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K ++G+I  P    + D+ ++ +     + + + M+   +  A+ ++ +
Sbjct: 362 NLVNRTISMQNKYFNGVISNPLECEDIDKELIDLALDTPKRVAKKMETLHVGDAIEEIFT 421

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K     DR +TVLY  +E IR  A+LL +F+P+ A KI D L
Sbjct: 422 LLKRCNKYIDETTPWVLGKDESKKDRLATVLYNLLESIRIAAVLLSSFMPETAEKILDEL 481

Query: 478 FVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             ++  R  +SL++   L+ G  +    + +F R 
Sbjct: 482 STSE--RSAESLEEFGNLECGHTVDAKPEILFARI 514


>gi|297616267|ref|YP_003701426.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144104|gb|ADI00861.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 646

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 218/516 (42%), Positives = 327/516 (63%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  YI+T I YP+   HIGHAY  + AD +AR+ R+ G DV F TG+DEHGQKI +
Sbjct: 1   MGDGKSFYITTPIYYPSDNLHIGHAYTTVAADCIARYKRMQGYDVFFLTGSDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+  K +VD+    F+ + D L IS++DFIRTTE+RH    + +++K+ +KGDIY
Sbjct: 61  TARDKGMEPKAYVDRIVDGFKVLWDTLLISHNDFIRTTEERHEKAVQTIFQKVYEKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y GWY    EA++ + ++  G           PV+  +EE YFF +S Y ++LL + 
Sbjct: 121 KAKYEGWYCTPCEAFWTERQLVDGK----CPDCDRPVELTQEESYFFAMSKYAERLLKHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNE+I+F+KSGL+DL +SR TF+WGI IP  P +++YVW DAL NYLT
Sbjct: 177 EENPDFIQPESRRNEMINFIKSGLEDLCVSRTTFEWGIPIPFAPGHVIYVWFDALVNYLT 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D+ +    K+WPAD+H++GKDI+RFH + WP  L++A+LPLPK+VF HG+++ +G
Sbjct: 237 AVGYPDDQE-KFGKYWPADVHLVGKDIVRFHTVIWPTILMAADLPLPKQVFGHGWLMLEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ ++E+ GVD++RY+L++E+  G DG+Y ++ L  R+N+DLAN +GN
Sbjct: 296 GKMSKSKGNVVDPLILVEKYGVDSIRYYLLKELNYGMDGYYSEEMLIARINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVSR++ MI +   G+IP PG     D+ ++   + V  E+   +       AL  V  L
Sbjct: 356 LVSRTIGMIERYCQGVIPVPGPQEGLDQELVDTAAAVYGEVGRQLDRLDFSSALGAVWRL 415

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D   PW L +     +R +TVLY   EVIR   I+L  F+P L  +I   + 
Sbjct: 416 ISRANKYIDESAPWLLARDEAKRERLNTVLYNLAEVIRITGIMLAPFMPTLPGRINRQIP 475

Query: 479 VADENRCFQSLDQRLKPGFML----HKTFDPIFPRF 510
           V D+    +   +  K G ++        + +FPR 
Sbjct: 476 VFDDPEQLR-WGEAGKWGLLVSGRKVAKGESLFPRI 510


>gi|241896681|ref|ZP_04783977.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
 gi|241870162|gb|EER73913.1| methionine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
          Length = 667

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 204/519 (39%), Positives = 312/519 (60%), Gaps = 11/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP+ + HIG+ Y  ++AD  AR+HRL   DV F TGTDEHG KI + 
Sbjct: 3   EEKKTFYITTPIYYPSGKLHIGNTYTTVLADAAARYHRLLNEDVYFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   ++ K +VDQ + + + +   L+IS D FIRTT+  H    + +++K  D+GDIYK
Sbjct: 63  AEKLNISPKEYVDQMAADIQKLWSDLEISNDGFIRTTDDYHEKAVQKIFQKFLDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++EE YFF +S Y D 
Sbjct: 123 GQYEGWYSVDDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVELVKEESYFFNMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YY++HP FI P  R NE+I +F++ GL+DL+++R  F WG+ +  DP +++YVWIDA
Sbjct: 183 LLDYYKTHPNFIQPSARMNEMIKNFIEPGLEDLAVTRTAFKWGVPVASDPDHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY+ +      K+WPA++H++GK+I+RFH IYWP  L +  L LP+ +  HG
Sbjct: 243 LSNYITKLGYMSDDTTMFDKYWPANVHLVGKEIVRFHTIYWPIMLHALGLELPETIVGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  +  K+SKS GNV+ P  + +  G+DA+RY+L+R +  G DG +  +    ++N DL
Sbjct: 303 WLTMRDGKMSKSKGNVVYPDTLADRYGIDAVRYYLLRAMPFGNDGIFTPEDFVSKLNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  DG+IP      T+ D  ++      +     NMQ+     A
Sbjct: 363 ANDLGNLLNRTVAMINKYEDGVIPELNTGLTDFDRELVQTAQDTIATYNANMQSMHTADA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA +  L+S  ++Y D   PW L K +      ++V+      +R +AILLQ  + +   
Sbjct: 423 LAAIWQLISRANKYIDETTPWTLAKDDSQADVLASVMAHLAAALRVVAILLQPILTQAPQ 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           KIF  L + D N     L  + L  G  + +   PIFPR
Sbjct: 483 KIFQQLGLQDSNVQISELQFEDLPTGGKVVEKGQPIFPR 521


>gi|162147584|ref|YP_001602045.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542217|ref|YP_002274446.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786161|emb|CAP55743.1| Methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529894|gb|ACI49831.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 512

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 236/507 (46%), Positives = 333/507 (65%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y++T I Y N  PHIGHAY  + AD++ARF RL G DV F TGTDEHGQK+ +AAQ 
Sbjct: 3   RRYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F D+ S +FR M DV+++SYDDFIRTTE RH      LW++I+  G IY G Y
Sbjct: 63  AGLAPIAFADRVSADFRAMYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY+LRDE++YN+DE+    DG        PV+W+ E  YFFRLSA+ D+LL  YE+ P
Sbjct: 123 EGWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVREPSYFFRLSAFADRLLDLYETRP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  RRNEV SFV+ GL+DLS+SR +F WGI +P D  ++MYVW+DAL NYL+  G+
Sbjct: 183 GFVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAIGF 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  +  +A FWPA+LH++GKDI+RFHAIYWPA L++A L LP  VFSHG+   +GEK+S
Sbjct: 243 PDARNP-RAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP +++ E G+D +R+FL+RE+  G D    +  +  R+N +LAN +GNL  R
Sbjct: 302 KSLGNVVDPRDLVAEFGLDPVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S + ++  G++P  G  T+ D ++L+    +   + E +  + +  AL +V  ++   
Sbjct: 362 TLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHEQIDRRALTDALEEVWRVIRAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW LKKT+PDR + VL V V+ +R +  +LQ ++P   + +   L VA++ R
Sbjct: 422 NAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDER 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F SL   L PG         IFPR++
Sbjct: 482 DFASLATPL-PGGRALPPPQGIFPRYV 507


>gi|118619731|ref|YP_908063.1| methionyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571841|gb|ABL06592.1| methionyl-tRNA synthetase MetS [Mycobacterium ulcerans Agy99]
          Length = 518

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 247/510 (48%), Positives = 348/510 (68%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+AA  
Sbjct: 2   KPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKVAQAAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A + T     +NS  F+ M + L+IS+D FIRTT+  H++  + +W+++   GDIY   Y
Sbjct: 62  ADIPTAQLARRNSDVFQRMQEALNISFDRFIRTTDSDHYEASQEIWRRMDAAGDIYLDSY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDE ++ + E       +      NPV W EE+ YFFRLSAY DKLL++YE++P
Sbjct: 122 SGWYSVRDERFFVESETQVVDGTRIATETGNPVTWTEEQTYFFRLSAYADKLLAHYEANP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFV  GLKDLS+SR +F+WG+ +P  P ++MYVW+DALTNYLT  GY
Sbjct: 182 DFIAPEVRRNEVVSFVSGGLKDLSVSRTSFNWGVPVPGHPDHVMYVWVDALTNYLTGAGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D    +  ++WPAD H+IGKDI+RFHA+YWPAFL+SA + LP++VF+HGF+ ++GEK+S
Sbjct: 242 PDTGSEAFLRYWPADQHMIGKDIIRFHAVYWPAFLMSAGIELPRRVFAHGFLHNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDP+ +IE  GVD +RYFL+RE+  G+DG Y ++ +  R+N DLAN +GNL  R
Sbjct: 302 KSLGNTIDPMGLIETYGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K+  G +P PG F+ +D  +L++   +L+ +RE+  NQ +H AL  +  ++   
Sbjct: 362 SLSMIAKNLGGAVPEPGEFSAADRELLAIADGLLERVREHFDNQSMHLALEAIWLMLGHA 421

Query: 425 DRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++YF  Q+PW L+K    T+  R  T LY T E +R  A+L+   +P+ A K+ D+L   
Sbjct: 422 NKYFSDQQPWVLRKSESETDQARFRTTLYTTCEAVRIAALLVAPVMPESAAKLLDLLGQR 481

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R F ++  RL PG  +      +FPR+
Sbjct: 482 PDQRSFNAIGARLVPGTAMPSP-TGVFPRY 510


>gi|169628221|ref|YP_001701870.1| methionyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240188|emb|CAM61216.1| Methionyl-tRNA synthetase (MetG) [Mycobacterium abscessus]
          Length = 523

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 259/515 (50%), Positives = 357/515 (69%), Gaps = 10/515 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAIAYPN +PHIGHAYE +  D +ARF RLDG DV + TGTDEHG K+A+ A  
Sbjct: 6   DPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVAQTAAA 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+ T      NS  F  +   L+IS+D FIRTT+  H++  + +W+K++D GDIY   Y
Sbjct: 66  AGIPTAQLARHNSDVFEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTY 125

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDEAYY D E     DG         PV W EE  YFFRLSAYQDKLL++YE+H
Sbjct: 126 SGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVDWTEEHSYFFRLSAYQDKLLAHYEAH 185

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNEV+SFV  GL+DLS+SR TFDWG+ +PD+P+++MYVW+DALTNYLT  G
Sbjct: 186 PEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNYLTGVG 245

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPA++H+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+ +KGEK+
Sbjct: 246 YPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTNKGEKM 305

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DPI ++   G+D +RYFL+RE+  G+DG Y ++GL  R+NADLAN +GNL  
Sbjct: 306 SKSIGNVVDPINLVNTFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQ 365

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+  G++P PG F   D  +L+    +L++ R + +   +H AL  +  ++  
Sbjct: 366 RSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLLEQARTHFEVPAMHLALEAIWQVLGA 425

Query: 424 VDRYFDAQKPWELKKT--------NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +RYF AQ+PW L K+        + +R  TVLY T+EV+R +A+L+Q  +P+ A K+ D
Sbjct: 426 SNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESAAKLLD 485

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +L  AD+ R F ++  RLKPG  L      +FP++
Sbjct: 486 LLGQADDQRDFAAIGTRLKPGVSLPAP-TGVFPKY 519


>gi|319783483|ref|YP_004142959.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169371|gb|ADV12909.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 516

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 266/511 (52%), Positives = 354/511 (69%), Gaps = 5/511 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K YI+T I YPN +PHIGHAY +I  D LARF RLDG DV F TGTDEHG K+ + A
Sbjct: 2   SRDKFYITTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDVFFLTGTDEHGLKMQQTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T     D+NS  FR M + +  S D +IRTTE RH+++C+ +WK ++  GDIY  
Sbjct: 62  EKEGITPLALADRNSAIFRAMTEAMGGSNDQYIRTTEPRHYESCQAIWKAMAANGDIYLD 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSGWYS+R EAY+++ E   G DG       +PV+W EEE YFFRLSAYQDKLL+ YES
Sbjct: 122 RYSGWYSVRQEAYFDESETTLGDDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYES 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+F+ P ERRNEV+SFVKSGLKDLS+SR TF WG+ +P D +++MYVW+DALTNY+T  
Sbjct: 182 QPDFVGPTERRNEVLSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAA 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +    +  +WPA  H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+ ++GEK
Sbjct: 242 GY-PDTKAEQWHYWPA-THIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  ++E  G+D +RYF +RE+  G DG Y  D +  R NADLANG+GNL 
Sbjct: 300 MSKSVGNVVDPFAMVEHYGLDQVRYFFLREVPFGNDGSYSHDAIVNRTNADLANGLGNLA 359

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+  G++P  G  T++D +IL   +  L   R+ +  Q IH ALA +  +V+
Sbjct: 360 QRSLSMIAKNCGGVVPQRGELTDADRAILDQAAAALDIARKAVAEQGIHLALAAIFGVVA 419

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E DRYF  + PW LKKTN  R  TVL+ T EV+R++A+L Q F P  A K+ D+L V  E
Sbjct: 420 EADRYFAGEAPWALKKTNLARMETVLWTTAEVVRRVAVLCQPFTPGSAAKLLDLLAVPAE 479

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
           +R F  +  D  L PG  L    + +FPR++
Sbjct: 480 SRDFVHVHADHALVPGTALP-VPEGVFPRYV 509


>gi|304386413|ref|ZP_07368746.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327770|gb|EFL94997.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 675

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 206/523 (39%), Positives = 323/523 (61%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIG++Y  I  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 2   MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIEQ 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T + +VD  ++  +++  +L+IS D FIRTT++ H  + + +++K+ D+GDIY
Sbjct: 62  KAEALHTTPQAYVDDMAKGIKELWKLLEISNDKFIRTTDEAHEKSVQYIFQKLLDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    N V+ ++EE YFF++S Y D
Sbjct: 122 LGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYAD 181

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YYE HP+FI P  R +E+I+   K GL+DL+++R +F WG+ + +DP++++YVWID
Sbjct: 182 WLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWID 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    ++WPA++H++GK+I+RFH IYWP  L +  L +PK+++ H
Sbjct: 242 ALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYGH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K +K+SKS GNVI P  ++E+ G+DALRY+L++ +    DG +  +    ++N D
Sbjct: 302 GWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G+IPT      E D  +  V +  ++  +E M++     
Sbjct: 362 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLEKVAAETIKNYQELMESMHFSD 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPK 468
           ALA+V  LVS  ++Y D   PW L + + +    + ++V+    E +R +AIL+Q  + +
Sbjct: 422 ALAEVWKLVSRSNKYIDETTPWILARNDDEASKQKLASVMNHLAESLRIIAILIQPVMTQ 481

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              KIF  L +       Q L    +  G  + +   PIFPR 
Sbjct: 482 SPAKIFGQLGLDPATMELQGLHFGEIPAGTKVVEKGTPIFPRL 524


>gi|284048773|ref|YP_003399112.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952994|gb|ADB47797.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 650

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 211/511 (41%), Positives = 312/511 (61%), Gaps = 6/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+A  HIGHAY   IAD +AR+ R +G DV F TG+DEHG KI + A
Sbjct: 2   TKPAFYITTPIYYPSADLHIGHAYCTTIADTIARYKRANGFDVQFITGSDEHGLKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ GV    + D+   +F+ + ++L +SY  F+RT+   H  T + L +K+ ++GDIYK 
Sbjct: 62  ESFGVKPIEYTDKIVADFKKLWEMLGVSYTSFVRTSSPEHEKTVQTLLQKVWEQGDIYKK 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E+++ + +V +   G        PV+ M E  YFFR+S Y D++L Y E+
Sbjct: 122 DYEGLYCVPCESFWTEHQVEEA--GGVCPDCGRPVEKMRESSYFFRMSKYADRILEYIET 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI++P DP++++YVW DAL  Y T  
Sbjct: 180 HPDFIQPVSRRNEMINFIKQGLEDLCISRSSFDWGIQVPFDPKHVVYVWFDALLAYFTGI 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+  + D    +FWPADLH++GK+I+RFH I WPA L++    LPK+V+ HG+++  G+K
Sbjct: 240 GFGRDMD-KFNRFWPADLHLVGKEIVRFHTIIWPAMLMAMGFDLPKEVYGHGWLVVDGDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP++ I+E G DA+RYFL+REI  G DG Y + GL KR N+DLAN +GNL 
Sbjct: 299 MSKSKGNVVDPVQPIQEFGADAVRYFLLREINLGSDGNYSRKGLIKRFNSDLANDLGNLQ 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+VSMI K + G++      +E+DE   S+ +  LQ  R  M    ++  +  + + V 
Sbjct: 359 YRTVSMIDKYHGGIVHKTVVESETDEKFRSLAAETLQNYRAAMDKYALNDGIKAIWAYVG 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R   V+Y   + +R +AIL+ + +P  A KIF+ L + 
Sbjct: 419 AANKYIDETTPWILAKDPAQAKRLEAVMYNLADAVRNIAILISSMMPFTAPKIFEQLGLT 478

Query: 481 -DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             E      +     P         PIFPR 
Sbjct: 479 VPEQFNLNDVAWGNFPDGTKVAKGQPIFPRI 509


>gi|227532988|ref|ZP_03963037.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189389|gb|EEI69456.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 660

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 209/521 (40%), Positives = 316/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG+AY  I ADVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MASKPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT + +VD  +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y
Sbjct: 61  KADKLGVTPQAYVDGMATQIKQLWKMLEITNDKFIRTTDKEHVEAVQTIVERLIKQGDVY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLSEVYRDQDGNVTGGKAPSGHEVQLVHEPSYFFKMSKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ H +F+ P  R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+D
Sbjct: 181 RLLKYYDEHLDFVQPASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  N      K+WPA++ +IGK+I+RFH IYWP  L++  LPLPKK+++H
Sbjct: 241 ALLNYITALGYGSNDHALFDKYWPANVQLIGKEIVRFHIIYWPIILMALGLPLPKKIYAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GN I P  ++E  G+DALRY+L+R I  G DG +  +    R+N D
Sbjct: 301 GWLVMKDGKMSKSKGNAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG++P      T  D+ +  V    L +  + M       
Sbjct: 361 LANDLGNLLNRTIAMINKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL QV  +VS  ++Y D  +PW L K     D+   V+    E +R +A+L+Q  +    
Sbjct: 421 ALYQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHLAESLRLIALLIQPVMTHAP 480

Query: 471 NKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 481 LQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 521


>gi|315925586|ref|ZP_07921796.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621127|gb|EFV01098.1| methionine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 724

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 214/513 (41%), Positives = 322/513 (62%), Gaps = 8/513 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  Y++T I YP+   HIGH Y  + AD L RF R  G D    TG+DEHGQKI K 
Sbjct: 76  EEKKTFYMTTPIYYPSGDLHIGHTYTTVAADTLTRFKRQQGYDAYMLTGSDEHGQKIQKI 135

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT K +VD      +++  +++I Y  FIRTT+  H  + + ++K++ D+GDIYK
Sbjct: 136 AEEKGVTPKAYVDGTVAKIKELWKLMNIDYSQFIRTTDADHVKSVQKIFKRLYDQGDIYK 195

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY   DEA++ D +V  G           PV+   EE YFFR+S Y D+LL Y E
Sbjct: 196 GRYEGWYCTPDEAFWTDTQVVDGK----CPDCGRPVERASEEAYFFRMSKYADRLLDYIE 251

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           SHP FI P  R+ E+I+   K GL+DL +SR +FDWGI +  DP +++YVWIDAL+NY+T
Sbjct: 252 SHPGFIQPEARQKEMINNFIKPGLQDLCVSRTSFDWGIPVEFDPGHVVYVWIDALSNYIT 311

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL++      ++WPADLH++GKDI+RFH IYWP  L++ +LPLPK ++ HG+IL KG
Sbjct: 312 ALGYLNDKPQLMDRYWPADLHLVGKDIIRFHTIYWPIMLMALDLPLPKTIYGHGWILLKG 371

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+E++++ GVD LRY +++E+  G DG Y +D L   +NADLAN +GN
Sbjct: 372 GKMSKSIGNVVDPVELVKKYGVDPLRYHVLKEMKYGADGNYSEDLLVGNINADLANDLGN 431

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M +K +DG IP      + D+++  V   V+Q   + M      RAL  +  L
Sbjct: 432 LLSRTVAMTVKYFDGTIPEERQSGDHDDALARVAEAVVQNYAKWMDKLDFSRALESIWEL 491

Query: 421 VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW L K +    R + VLY   E +R + +L+ A +P+ ++KI + + 
Sbjct: 492 IGRANKYIDETEPWVLGKDDSQKSRLAAVLYNLSEALRIVGVLIAAPMPETSDKILEQMR 551

Query: 479 VADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
           + ++   + S+      P  +  +  +P++PR 
Sbjct: 552 IPEDLATWDSIQHFGSYPSGVQVERCEPLYPRI 584


>gi|270290915|ref|ZP_06197139.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280975|gb|EFA26809.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 675

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 206/523 (39%), Positives = 323/523 (61%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIG++Y  I  D  ARF RL G DV F TGTDEHG KI +
Sbjct: 2   MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLQGKDVFFLTGTDEHGLKIEQ 61

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T + +VD  ++  +++  +L+IS D FIRTT++ H  + + +++K+ D+GDIY
Sbjct: 62  KAEALHTTPQAYVDDMAKGIKELWKLLEISNDKFIRTTDEAHEKSVQYIFQKLLDQGDIY 121

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  +G+    +    N V+ ++EE YFF++S Y D
Sbjct: 122 LGEYEGWYSVSDEEYFTESQLAEVYRDENGKVIGGKAPSGNEVELVKEESYFFKMSKYAD 181

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YYE HP+FI P  R +E+I+   K GL+DL+++R +F WG+ + +DP++++YVWID
Sbjct: 182 WLLDYYEKHPDFIQPASRMHEMINNFIKPGLEDLAVTRTSFKWGVPVKNDPKHVIYVWID 241

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    ++WPA++H++GK+I+RFH IYWP  L +  L +PK+++ H
Sbjct: 242 ALSNYITALGYGSDDDSLFKRYWPANVHMVGKEIVRFHTIYWPIMLHALGLEMPKQIYGH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K +K+SKS GNVI P  ++E+ G+DALRY+L++ +    DG +  +    ++N D
Sbjct: 302 GWLLMKDDKMSKSKGNVIYPETIVEKYGLDALRYYLLKAMPYSNDGNFTPEDFVSKINFD 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G+IPT      E D  +  V +  ++  +E M++     
Sbjct: 362 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLEKVAAETIKNYQELMESMHFSD 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPK 468
           ALA+V  LVS  ++Y D   PW L + + +    + ++V+    E +R +AIL+Q  + +
Sbjct: 422 ALAEVWKLVSRSNKYIDETTPWILARNDDEESKQKLASVMNHLAESLRIIAILIQPVMTQ 481

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              KIF  L +       Q L    +  G  + +   PIFPR 
Sbjct: 482 SPAKIFGQLGLDPATMELQGLHFGEIPAGTKVVEKGTPIFPRL 524


>gi|291541997|emb|CBL15107.1| methionyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 648

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 199/514 (38%), Positives = 306/514 (59%), Gaps = 9/514 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+  PHIGH Y  +  D +AR+ R+ G DV+F TGTDEHG KI +
Sbjct: 1   MCQKKPFYITTPIYYPSGNPHIGHCYTTVACDSIARYRRMQGYDVMFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT K +VD+  + F+ +   ++ISYD +IRTT+  H +T + ++K++ DKG IY
Sbjct: 61  KAAEKGVTPKEYVDEIVKTFKGLWKFMNISYDRYIRTTDDYHIETVQKIFKELYDKGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            V   +EE YFF++S + D++    
Sbjct: 121 KGEYKGKYCTPCESFWTESQLIDGK----CPECGREVTEAKEEAYFFKMSPFADRIEKLL 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                          V +F+K GL+DL +SR TF WGI +  D ++I+YVW+DAL+NY++
Sbjct: 177 TETDYLQPKTRAVELVNNFIKPGLEDLCVSRTTFKWGIPVTFDEKHIVYVWVDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +       K+WPAD+H++ KDI+RFHAI WPA L++ +LPLPK +  HG+I   G
Sbjct: 237 ALGYKNEKFDEFDKYWPADVHMVAKDIMRFHAIIWPAMLMALDLPLPKHLAVHGWITFNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGNV+DP  + E  G DA+RY ++RE+A G D  +  + +  R+N+DLANG+GN
Sbjct: 297 QKMSKSLGNVVDPFVLGERYGADAIRYHIMREMALGADSAFSNEIMINRINSDLANGLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVSR+V+M+ K + G +PT     E D+ ++   + +  ++ + M    +  ALA++  L
Sbjct: 357 LVSRTVAMVQKYFGGTLPTERESGEFDDDLIETATSLRAKVDDFMDKTQLQNALAEIFKL 416

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VS  ++Y D   PW + K  T   R +TVLY  +E IR    LL AF+P    K  + + 
Sbjct: 417 VSRANKYIDETAPWVIAKDETKKARLATVLYNLLEAIRIACTLLSAFMPTTMPKALEQIG 476

Query: 479 VADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             ++   +++ D+   L     +HK  D +FPR 
Sbjct: 477 ACEKCAGYENCDKFGVLPADVTVHK-GDALFPRI 509


>gi|82750197|ref|YP_415938.1| methionyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|82655728|emb|CAI80127.1| ethionyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 657

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 323/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|309775299|ref|ZP_07670308.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916962|gb|EFP62693.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 681

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 203/513 (39%), Positives = 312/513 (60%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAI Y + +PHIG+ YE+I+ D +AR+ R  G DV F TGTDEHGQKI + A
Sbjct: 31  NKKPYYITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD+ +   R   D+++ SYD FIRTT+  H    + ++KK+ ++GDIYK 
Sbjct: 91  KEAGVTPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQGDIYKS 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PV+   EE YFF L  Y  +L+ + E 
Sbjct: 151 TYEGLYCTPCESFWTESQLVDGK----CPDCGRPVEKASEEAYFFNLQKYAPRLIKHIED 206

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+I+   K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T+
Sbjct: 207 HPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITS 266

Query: 242 TGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+  + +      K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L  
Sbjct: 267 LGFDADGNHGELYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVG 326

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +R+N+DLAN +G
Sbjct: 327 DGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANVLG 386

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K ++G+I  P    + D+ ++++     + + + M+   +  A+ ++ +
Sbjct: 387 NLVNRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEIFT 446

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D   PW L K     DR +TVLY  +E IR  A+LL +++P+ A KI + L
Sbjct: 447 LLKRCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRISAVLLSSYMPETAEKILEEL 506

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++           L+ G  +    + +F R 
Sbjct: 507 STSEREADSLKEFGMLECGHTVEGKPEILFARI 539


>gi|295425704|ref|ZP_06818391.1| methionine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064720|gb|EFG55641.1| methionine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 658

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 211/520 (40%), Positives = 315/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKKTFYITTPIYYPSGKLTIGNAYTTIAADSMARYKRAQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +  +LDISYD FIRTT+ +H    + +++K+  +GDIY
Sbjct: 61  KAEKQGIKPQEFVDKMAASYKKLWKMLDISYDKFIRTTDPQHVKAVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + VQ + E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVQLVREPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLVQYYKDHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPK++F H
Sbjct: 241 ALSNYITALGYGSYDDSLFRKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++E  G+DALRY+L+REI  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVERYGLDALRYYLMREIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG + P      E    ++      + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGEVAPVASDQDELGTDLIKTAKETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    +  S V+    E +R +AIL+   + +   
Sbjct: 421 ALDAIWKLISRANKYIDETTPWTLNKEGKKEELSRVMSNLAESLRIVAILISPIMTESPL 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F  L +   N   + L+         + +   PIFPR 
Sbjct: 481 KMFKQLGLDWNNAEEKKLEFAGFDWNVKVTEKPTPIFPRL 520


>gi|217077634|ref|YP_002335352.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037489|gb|ACJ76011.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 638

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 219/510 (42%), Positives = 335/510 (65%), Gaps = 7/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N++PHIG AY  II D++AR+ RL G +V + TGTDEHGQKI +AA+ 
Sbjct: 2   KKFYITTPIYYVNSEPHIGSAYTTIIGDIIARYKRLMGYEVFYLTGTDEHGQKIMQAAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D+ S+ F  +   L I+ D FIRTT++ H  T +    K+ +  DIYKG Y
Sbjct: 62  QGKTPQQLCDELSKKFEQLWKDLKITNDYFIRTTDEEHIKTVQFFVSKMLENEDIYKGKY 121

Query: 125 SGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY +  E Y+++DE+ K   +     + H P+ ++EEE YFFRLS Y + LL +++ +
Sbjct: 122 KGWYCVPCETYWSEDEIEKDENNNPVCPSCHRPLNFVEEENYFFRLSKYTEPLLKHFKEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ P  R+NE++  ++ GLKDLS++R TFDWGI +P+DP++++YVW+DAL NY++  G
Sbjct: 182 PDFVEPEFRKNEMLKILEEGLKDLSITRTTFDWGIPMPNDPKHVIYVWVDALINYISAIG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + +  K K+WPADLH+IGK+I RFH++ WPA L+S  LPLPKK+F+HG++   G+KI
Sbjct: 242 YGKDEETFK-KWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFAHGWLTVNGQKI 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP E +++ G D +RY+L R+I  GKDG + ++ L  R+N+DLAN  GNL+ 
Sbjct: 301 SKSLGNAIDPREFVKKYGNDVIRYYLARDIVFGKDGDFSEENLVNRLNSDLANDYGNLLH 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++M++K++D  IPTP +  ESD+ ++     + +E  E M++  +  AL  + S + +
Sbjct: 361 RTLAMVVKNFDSKIPTPSSLNESDKELIEKFKNLKKEYTEYMESYKLTNALESIWSYIRD 420

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-D 481
           V++YFD  KPW L K  N +R  T+LY T+E   ++A LL  F+P  + ++F  L    +
Sbjct: 421 VNKYFDENKPWVLAKEGNKERLGTILYNTLEAFIKIASLLLPFMPDSSKEVFRRLGQEFN 480

Query: 482 ENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
                 +    LK G  ++H+   P+F + 
Sbjct: 481 PEFVLNTEWNSLKSGANVIHEK--PLFQKI 508


>gi|302332203|gb|ADL22396.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 657

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|313898934|ref|ZP_07832461.1| methionine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956133|gb|EFR37774.1| methionine--tRNA ligase [Clostridium sp. HGF2]
          Length = 657

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 204/514 (39%), Positives = 314/514 (61%), Gaps = 9/514 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  YI+TAI Y + +PHIG+ YE+I+ D +AR+ R  G DV F TGTDEHGQKI + 
Sbjct: 6   KNKKPYYITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQKIEEK 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGVT K FVD+ +   R   D+++ SYD FIRTT+  H    + ++KK+ ++GDIYK
Sbjct: 66  AKEAGVTPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQGDIYK 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G Y    E+++ + ++  G           PV+   EE YFF L  Y  +L+ + E
Sbjct: 126 STYEGLYCTPCESFWTESQLVDGK----CPDCGRPVEKASEEAYFFNLQKYAPRLIKHIE 181

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            HPEFI P  R+NE+I+   K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T
Sbjct: 182 DHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYIT 241

Query: 241 TTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+  + +      K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L 
Sbjct: 242 SLGFDADGNHGELYQKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLV 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +R+N+DLAN +
Sbjct: 302 GDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANVL 361

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K ++G+I  P    + D+ ++++     + + + M+   +  A+ ++ 
Sbjct: 362 GNLVNRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEIF 421

Query: 419 SLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +L+   ++Y D   PW L K     DR +TVLY  +E IR  A+LL +++P+ A KI + 
Sbjct: 422 TLLKRCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRFSAVLLSSYMPETAEKILEE 481

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L  ++ +         L+ G  +    + +F R 
Sbjct: 482 LSTSERDADSLKEFGMLECGHTVEGKPEILFARI 515


>gi|329731069|gb|EGG67441.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 657

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|21282174|ref|NP_645262.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485354|ref|YP_042575.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207407|ref|ZP_06923846.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910366|ref|ZP_07127819.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|25009356|sp|Q8NY00|SYM_STAAW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|60390700|sp|Q6GBZ8|SYM_STAAS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21203610|dbj|BAB94310.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243797|emb|CAG42222.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296887970|gb|EFH26864.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888355|gb|EFK83542.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 657

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|15923480|ref|NP_371014.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926167|ref|NP_373700.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|156978818|ref|YP_001441077.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253316233|ref|ZP_04839446.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253735224|ref|ZP_04869389.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005283|ref|ZP_05143884.2| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|258429606|ref|ZP_05688280.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|269202110|ref|YP_003281379.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895097|ref|ZP_06303317.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|296276555|ref|ZP_06859062.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039687|sp|P67579|SYM_STAAN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54042047|sp|P67578|SYM_STAAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13700380|dbj|BAB41678.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246258|dbj|BAB56652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156720953|dbj|BAF77370.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253726784|gb|EES95513.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257849665|gb|EEV73632.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|262074400|gb|ACY10373.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282762515|gb|EFC02655.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 657

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|296116331|ref|ZP_06834947.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977150|gb|EFG83912.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 512

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 238/507 (46%), Positives = 331/507 (65%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y++T I Y N  PHIGHAY  + ADV+ARF RL G DV F TGTDEHGQK+ +AA  
Sbjct: 3   RRYYVTTPIYYVNGAPHIGHAYTSVAADVIARFKRLAGFDVFFLTGTDEHGQKVEQAAHT 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT     ++ + +FRDM D + ISYDDFIRTT+ RH +    LWKK+ + G IY G Y
Sbjct: 63  AGVTPIELANRVAADFRDMYDKMAISYDDFIRTTQPRHAEGAAALWKKLEENGHIYLGAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY+LRDE +Y ++E+   ADG        PV+W++E  YFFRLS +QD+LL  YE+HP
Sbjct: 123 EGWYALRDECFYQEEELVIAADGTRTAPTGAPVEWVKEPSYFFRLSKFQDRLLELYETHP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  RRNEV SFV+ GL+DLS+SR +F+WGI +P DP+++MYVW+DAL NYL+  GY
Sbjct: 183 GFVEPAGRRNEVRSFVRGGLRDLSISRTSFNWGIPVPGDPKHVMYVWVDALANYLSAVGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D     +  FWPA+LH++GKDILRFHAIYWPA L+ A LPLP++VFSHG+    G+K+S
Sbjct: 243 PDEGAP-RWDFWPANLHLVGKDILRFHAIYWPALLMGAGLPLPERVFSHGWWTIAGQKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP +++ E G+D +R+FL+RE+  G D   ++  +  R+N +LAN +GNL  R
Sbjct: 302 KSLGNVLDPRDLVAEFGLDPVRFFLMREMPFGGDSDINRKAIITRMNVELANDLGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S I ++  G++P     T  D ++L+  S +   +   +  Q +  AL +V  ++   
Sbjct: 362 TLSQIARNCAGLLPERATPTAEDTALLAQASLLPDLMHGQIDRQALTDALEEVWKVIRAS 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW LKKT+P R + VL V  +V+R +A +LQ ++P   + +   L V    R
Sbjct: 422 NAYIDHQAPWALKKTDPQRMADVLRVLADVLRTIATVLQPYMPGSMDTMLTQLGVEATER 481

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F +L   L  G  L      IFPRF+
Sbjct: 482 DFAALGTPLPAGRPLPAP-KGIFPRFV 507


>gi|227824451|ref|ZP_03989283.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904950|gb|EEH90868.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 644

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 221/512 (43%), Positives = 313/512 (61%), Gaps = 8/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   +I+T I YP+A  HIGHAY   IAD +AR+ R +G DV F TG+DEHG KI + A
Sbjct: 2   SKPAFFITTPIYYPSANLHIGHAYCSTIADTIARYKRANGFDVRFVTGSDEHGLKIQRKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +VD    NF+ + ++L ISY DF+R++   H    + + +++ DKGDIYK 
Sbjct: 62  EENGMTPLQYVDGIVANFKKLWEMLGISYTDFVRSSSAEHERVVQEILQRVYDKGDIYKK 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E+++ D ++ +   G        PV+ MEEE YFFR+S Y D++L + E+
Sbjct: 122 KYVGKYCVPCESFWTDRQIEEA--GGVCPDCGRPVETMEEEDYFFRMSKYADQILKHIEN 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ RRNE+I+F+K GL+DL +SR TFDWGI +P D + I YVW DAL  Y T  
Sbjct: 180 HPDFIQPVSRRNEMIAFLKQGLEDLCISRSTFDWGIPVPFDKKQITYVWFDALLCYFTGI 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+L N +    +FWP DLH++GK+I+RFH I WPA LLS    LPKKV+ HG+++  G+K
Sbjct: 240 GFLRNEE-EFNRFWPVDLHLVGKEIVRFHTIIWPAMLLSMGYELPKKVYGHGWLVVNGDK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+E I+E G DA+RYFL+ EIA G DG Y ++GL +R N DLAN +GNL 
Sbjct: 299 MSKSKGNVVDPVEPIKEFGPDAVRYFLLSEIALGNDGNYSREGLIRRWNTDLANDLGNLQ 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+VSMI K + G++    +    D++  ++    L   R+ M    I+ AL  V S + 
Sbjct: 359 YRTVSMIEKYHQGIVHKTASDHADDKAFAALAEETLGSYRKAMDEYQINDALKAVWSYIG 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR   V+Y   + +R +AIL+   +P  A KIF+ L +A
Sbjct: 419 AANKYIDVTTPWILAKDPAQKDRLEAVMYNLADAVRNIAILISPMMPFTAPKIFEQLGLA 478

Query: 481 -DENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             EN     +       G  + K   PIFPR 
Sbjct: 479 VPENFDLNEVKYGGFSDGTKVMK-GQPIFPRI 509


>gi|301598374|pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598375|pdb|2X1L|B Chain B, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598376|pdb|2X1L|C Chain C, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598377|pdb|2X1M|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine
          Length = 524

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 253/511 (49%), Positives = 355/511 (69%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAIAYPN  PHIGHAYE I  D +ARF RLDG DV + TGTD HGQK+A+ A  
Sbjct: 12  EPFYITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAK 71

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+       +NS  F+ + + L+IS+D FIRT++  H++  + +WK+++D GDIY   Y
Sbjct: 72  EGIPAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAY 131

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWYS+RDE ++ ++E  +  DG     +   PV W EE+ YFFRLSAY D+LL+ YE H
Sbjct: 132 KGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEH 191

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++SFV  GLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 192 PEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 251

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D    S  ++WPADLH+IGKDI+RFH +YWPAFL+SA LPLPK++F+HG++L++GEK+
Sbjct: 252 FPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLPLPKRIFAHGWLLNRGEKM 311

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYFL+RE+  G+DG Y++D +  RVNADLAN +GNL  
Sbjct: 312 SKSIGNVVDPVNLVDTFGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQ 371

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+    +P PG FT+ D ++L+    +L+ +RE+     +H AL  + S++  
Sbjct: 372 RSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGA 431

Query: 424 VDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K     +  R  TVLY T+EV+R  ++LLQ  +P+   K+ D+L  
Sbjct: 432 ANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQ 491

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F ++  R+KPG  L      IFPR+
Sbjct: 492 PTDERDFSAIANRIKPGTSLPAP-SGIFPRY 521


>gi|302672159|ref|YP_003832119.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
 gi|302396632|gb|ADL35537.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
          Length = 679

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/517 (41%), Positives = 316/517 (61%), Gaps = 14/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA- 59
           M+ + K YI+TAIAY + +PHIG++YE+++AD +AR+ R DG DV F TG+DEHGQKI  
Sbjct: 1   MQNKGKYYITTAIAYTSGKPHIGNSYEIVLADAIARYKRRDGFDVHFQTGSDEHGQKIET 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +A +    + K FVDQ S   + + +++D SYD FIRTT+  H    + ++K+  D+GDI
Sbjct: 61  RAIEAGCASPKEFVDQVSDTIKGLWNLMDTSYDRFIRTTDDDHVKQVQKIFKRFYDQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y    EA+Y + ++  G           PV   EEE YFF++S Y DKL+ Y
Sbjct: 121 YKGSYKGMYCTECEAFYTESQLKDGK----CPECGGPVHPAEEEAYFFKMSKYADKLIDY 176

Query: 180 YESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DAL+NY
Sbjct: 177 INTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNY 236

Query: 239 LTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           +T  GY      S+   K+WPADLH+IGKDI+RFH IYWP FL++   PLPK++F H ++
Sbjct: 237 ITGIGYDAEGHSSEEYKKWWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQIFGHPWL 296

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  GEK+SKS GNVI   +++   GVD +RYF++ E+    DG    + L +R N+DLAN
Sbjct: 297 LQGGEKMSKSKGNVIYADDLVSLFGVDPVRYFVLHEMPFENDGVITWELLVERFNSDLAN 356

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNLV+R+++M  K   G++   G   + D  + +V +    ++ + M    +  AL +
Sbjct: 357 TLGNLVNRTIAMSNKYLGGVVADKGVTEDVDADLKAVVTSCYDKVEKKMDELRVADALTE 416

Query: 417 VISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + +L    ++Y D  +PW L K     DR STVLY  VE I   A LL  F+P+ A KI 
Sbjct: 417 IFTLFKRCNKYIDETEPWVLGKDESKKDRLSTVLYNLVESISIGAALLDPFMPETAQKIR 476

Query: 475 DILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
           + L   +  R F SL Q   L  G  + +  + +F R
Sbjct: 477 EQLNAPE--REFDSLGQFGVLASGTKVVEAPEMLFAR 511


>gi|148266948|ref|YP_001245891.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392994|ref|YP_001315669.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794269|ref|ZP_05643248.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407213|ref|ZP_05680358.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420820|ref|ZP_05683756.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258446123|ref|ZP_05694284.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258453822|ref|ZP_05701795.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|295407379|ref|ZP_06817176.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297246459|ref|ZP_06930299.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|147740017|gb|ABQ48315.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945446|gb|ABR51382.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788241|gb|EEV26581.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841171|gb|EEV65620.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843212|gb|EEV67625.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257855100|gb|EEV78042.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257863993|gb|EEV86748.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|285816189|gb|ADC36676.1| Methionyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967736|gb|EFG43768.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176646|gb|EFH35908.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315128616|gb|EFT84619.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329725056|gb|EGG61551.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|42518288|ref|NP_964218.1| methionyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582572|gb|AAS08184.1| methionyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329666598|gb|AEB92546.1| methionyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 658

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 320/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++D+  +LD+SYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDKMADSYKDLWKMLDVSYDRFIRTTDEDHVKAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMRDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P      E  + ++   +  + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K    +  S V+    E +R +AIL+   + +   
Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMTNLAESLRLIAILIAPVMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  +N   + LD         + +   PIFPR 
Sbjct: 481 KMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 520


>gi|298693820|gb|ADI97042.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 321/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TIWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLAQYGVLTEPIMVTGQPKPIFPRL 522


>gi|303229591|ref|ZP_07316379.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515716|gb|EFL57670.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 649

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 212/519 (40%), Positives = 319/519 (61%), Gaps = 19/519 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTFYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDFIRTT+ RH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDARHEKVVQELFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++    +         PV+ ++EE YFF+L  Y D+ L + E 
Sbjct: 124 EYEGWYCTPCESFWTEQKLG---ENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       KFWPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP  +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPNPLIDTYGADSLRYYLLSEITLGHDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D+ I S+  + + +    M+   +++AL  V + +S
Sbjct: 361 NRTIAMIEKYHGGIITKTNDVDDLDKEISSLAEQTVADFEAQMEAMELNKALKTVWAFIS 420

Query: 423 EVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K++ +    R  +V+Y   E +R +A+L+   +P  A KI+D L 
Sbjct: 421 RMNKYIDETMPWVLAKSSDETDVRRLQSVMYHLAESLRIIAVLVSPVIPVGAPKIWDQLG 480

Query: 479 VA-------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +        D+ R +      ++ G  + K  +PI+PRF
Sbjct: 481 LGGFEHVQLDDVRTW----GGIQTGTKVVK-GEPIYPRF 514


>gi|258448031|ref|ZP_05696161.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257858721|gb|EEV81594.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVYPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|323438722|gb|EGA96462.1| methionyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442066|gb|EGA99701.1| methionyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 321/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L+  +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMVLDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|49482717|ref|YP_039941.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424601|ref|ZP_05601029.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257429904|ref|ZP_05606290.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432607|ref|ZP_05608969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435511|ref|ZP_05611561.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903075|ref|ZP_06310967.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904865|ref|ZP_06312725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907812|ref|ZP_06315650.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910128|ref|ZP_06317934.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913317|ref|ZP_06321108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918271|ref|ZP_06326011.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923022|ref|ZP_06330708.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957279|ref|ZP_06374737.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500366|ref|ZP_06666218.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509304|ref|ZP_06668020.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293515893|ref|ZP_06670583.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427024|ref|ZP_06819661.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591600|ref|ZP_06950237.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|60390704|sp|Q6GJI1|SYM_STAAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49240846|emb|CAG39513.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272628|gb|EEV04748.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257279420|gb|EEV10015.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282472|gb|EEV12605.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285148|gb|EEV15265.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314541|gb|EFB44928.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317837|gb|EFB48206.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322788|gb|EFB53108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325976|gb|EFB56282.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328288|gb|EFB58563.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331982|gb|EFB61491.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596501|gb|EFC01461.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283791203|gb|EFC30013.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921301|gb|EFD98359.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096326|gb|EFE26586.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467849|gb|EFF10359.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295129027|gb|EFG58656.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575469|gb|EFH94186.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312436421|gb|ADQ75492.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193851|gb|EFU24245.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|283469782|emb|CAQ48993.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 657

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 216/520 (41%), Positives = 323/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHQVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|227888942|ref|ZP_04006747.1| methionyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850530|gb|EEJ60616.1| methionyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 664

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 206/520 (39%), Positives = 320/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 7   MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++D+  +LD+SYD FIRTT++ H    + +++++  +GDIY
Sbjct: 67  KAEAQGIKPQEFVDKMADSYKDLWKMLDVSYDRFIRTTDEDHVKAVQKIFERLLKQGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 127 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 186

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 187 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 246

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 247 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 306

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 307 GWVLMRDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 366

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P      E  + ++   +  + E ++ M      +
Sbjct: 367 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 426

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K    +  S V+    E +R +AIL+   + +   
Sbjct: 427 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMTNLAESLRLIAILIAPVMTQSPV 486

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  +N   + LD         + +   PIFPR 
Sbjct: 487 KMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 526


>gi|49475612|ref|YP_033653.1| methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|49238419|emb|CAF27646.1| Methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 519

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 260/509 (51%), Positives = 362/509 (71%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YPN  PHIGHAY  I +DVLARF RLDG +V F +GTDEHG K+ + A  
Sbjct: 3   DTYYITTPIFYPNGAPHIGHAYSAIASDVLARFQRLDGKNVFFLSGTDEHGLKMQQTAVA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   D+NS  F+ M   L+ S +DFIRTTEKRH+  C+ +WKK+   GDIY   Y
Sbjct: 63  LGITPKQLTDRNSAVFQKMLAALNCSNNDFIRTTEKRHYQACQEIWKKMKANGDIYLSRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +GWYS+R EAYY + +   G D      +  +PV+W EEE YFF+LS Y+  LL +YE H
Sbjct: 123 TGWYSVRQEAYYEEKDTEVGEDNIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEKH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P ERRNEVISF+KSGLKD+S+SR +F+WGI +P+D +++MYVW+DALTNYL+  G
Sbjct: 183 PDFIAPPERRNEVISFIKSGLKDISISRASFNWGICVPNDSKHVMYVWVDALTNYLSAIG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D     +A FWPA +H+IGKDI+RFHAIYWPAFL+SA + LPK++F+HGF+L+ G K+
Sbjct: 243 FFDENSKKRA-FWPASVHIIGKDIIRFHAIYWPAFLMSAGIALPKRIFAHGFLLNNGVKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP E+I+  G+D +RYFL+RE+  G+DG Y  D    R+NADLAN +GNL  
Sbjct: 302 SKSIGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYSHDSFVNRINADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+ D  +P P AF   DE +L    + L  +R+ M +Q IH AL+ + S+V++
Sbjct: 362 RSLSMIAKNCDAKVPLPAAFLVQDEQLLEKSLQTLDTMRKAMSSQEIHLALSAIFSVVAD 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  ++PW L+K NP+R STVLY+T+E++R++ I+L  F+P+ A K+ D L ++ E+
Sbjct: 422 ANRYFANEQPWSLRKNNPERFSTVLYITLEILRRIGIMLLPFMPQSAAKLLDSLKISQED 481

Query: 484 RCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           R  Q + + +++ G  L    +PIFPR++
Sbjct: 482 RLLQHISNSKIQEGLDLP-PPEPIFPRYI 509


>gi|57651372|ref|YP_185421.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|88194248|ref|YP_499040.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220665|ref|YP_001331487.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|221142318|ref|ZP_03566811.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258452829|ref|ZP_05700824.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049975|ref|ZP_06022834.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282925564|ref|ZP_06333217.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023499|ref|ZP_06377897.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|304380506|ref|ZP_07363183.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81695187|sp|Q5HII6|SYM_STAAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57285558|gb|AAW37652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87201806|gb|ABD29616.1| methionyl-tRNA synthetase, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150373465|dbj|BAF66725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257859515|gb|EEV82368.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259161910|gb|EEW46493.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940061|emb|CBI48437.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592468|gb|EFB97480.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|302750380|gb|ADL64557.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340951|gb|EFM06874.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320139424|gb|EFW31302.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|329313208|gb|AEB87621.1| Methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729770|gb|EGG66167.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 657

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLNESIMVTGQPKPIFPRL 522


>gi|304407079|ref|ZP_07388733.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344066|gb|EFM09906.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 662

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 221/517 (42%), Positives = 319/517 (61%), Gaps = 11/517 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E  K  YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI 
Sbjct: 1   MSESNKSFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVRYLTGTDEHGQKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + AQ +G T   FVD+     +++   LDISYDD+IRTTE RH      ++ K+ ++GDI
Sbjct: 61  RKAQESGKTPLQFVDEIVLGIKELWKKLDISYDDYIRTTEDRHKRVVERIFTKLVEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y GWY    E+++ + ++  G           PV+ ++EE YFF LS Y D+LL +
Sbjct: 121 YKGEYEGWYCTPCESFFPERQLNDGN----CPDCGRPVELVKEESYFFSLSKYADRLLQH 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +E +PEFI P  R+NE+I+   K GL+D ++SR TFDWGIK+P+DP++++YVWIDAL NY
Sbjct: 177 FEENPEFIQPESRKNEMINNFIKPGLEDFAVSRTTFDWGIKVPNDPKHVVYVWIDALFNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GY  + DG   KFWPAD+H++GK+I+RFH IYW + L++ +LPLPKK+F+HG+ L 
Sbjct: 237 ISALGYDTSEDGLYRKFWPADVHLVGKEIVRFHTIYWTSMLMALDLPLPKKIFAHGWWLT 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS G VIDP+++I+  G+D LRYFL+RE+  G DG +  +   +R N DLAN +
Sbjct: 297 KEGKMSKSKGTVIDPVKLIDRYGLDVLRYFLLREVPFGSDGAFTPESFVERTNFDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K +DG IP   G  T  D  +       ++ I   M+      AL  +
Sbjct: 357 GNLLNRTVAMIDKYFDGAIPAYTGDVTAFDVLLRQQAVESIEAIEAAMEKMEFSVALTAL 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             LVS  ++Y D  +PW L K    RA  ++ +Y   E +R ++I+LQ F+      ++ 
Sbjct: 417 WQLVSRTNKYIDETQPWVLAKDESKRAELASSMYHLAESLRIVSIVLQPFLTNAPRAMWA 476

Query: 476 ILFV-ADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
            L + A E   + S       PG       +P+F R 
Sbjct: 477 QLGIEAGELTTWDSAKSFGTLPGGTRVSKAEPMFMRL 513


>gi|217976728|ref|YP_002360875.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217502104|gb|ACK49513.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 519

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 246/509 (48%), Positives = 345/509 (67%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              YI+TAI Y N  PHIGHAYE I  D +ARF RLDG + LF TG DEHGQK+ + A  
Sbjct: 4   PTFYITTAIPYANGAPHIGHAYERIATDAIARFKRLDGYETLFVTGMDEHGQKMQQTAAR 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++     D+ +  F  M ++L+ S DD +RTTE RHH   + +WK++   GDIY   Y
Sbjct: 64  ENLSPLQLADRTAAQFYAMGELLNASADDIVRTTEARHHAASQEIWKRMQASGDIYLSKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+++D E+  G  G        PV+W+EEE Y+FRLSAYQ++LL+ Y   P
Sbjct: 124 PGWYSVRDEAFFDDSELTDGPGGSKLAPTGAPVEWVEEESYYFRLSAYQERLLALYRERP 183

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P + RNE+++FV+ GL DLS+SR TFDWG+ +P DP+++MYVW+DALTNY+T TG+
Sbjct: 184 DFVTPEKYRNEIVAFVERGLTDLSISRSTFDWGVPVPGDPKHVMYVWVDALTNYITGTGF 243

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D     +AKFWPAD HVIGKDI RFHAIYWPAFL+SA L +PK++ +HGF+ ++GEK+S
Sbjct: 244 PDAASP-RAKFWPADAHVIGKDITRFHAIYWPAFLMSAGLLVPKQIVTHGFLFNRGEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNVIDP  + +E GVD  RYFL+RE+  G+DG Y  + +  R NADLAN +GNL  R
Sbjct: 303 KSIGNVIDPFALAKEYGVDPFRYFLLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+  G++P+  A  E+DE++L     + Q+ R +M++  +H  LA++  +V E 
Sbjct: 363 SLSMLAKNCGGVLPSSPALNETDEALLFQARALPQKARGHMRDYALHLILAEIWRVVGEA 422

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  ++PW  +KT+P R  +VLYVTVEV+R +AI+ Q F+P    ++ D L VA + R
Sbjct: 423 NRYFATEEPWVKRKTDPARMESVLYVTVEVLRIIAIMTQPFMPASMERLLDSLGVAKDAR 482

Query: 485 CFQSLDQRL--KPGFMLHKTFDPIFPRFL 511
            F   +  +   P   L     P+FPR++
Sbjct: 483 SFADAENFILRAPSGPLPAP-TPVFPRYV 510


>gi|325963761|ref|YP_004241667.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469848|gb|ADX73533.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 520

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 254/511 (49%), Positives = 338/511 (66%), Gaps = 3/511 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   YI+TAI YPN  PHIGHAYE I  D +ARF RLDG DV+F TGTDEHG KIA+ 
Sbjct: 4   SEKTPFYITTAITYPNGVPHIGHAYEYIATDAMARFKRLDGYDVMFLTGTDEHGMKIAQT 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  VD+N+  ++     L I+YD FIRTT+  H+   + +WKK+   GDIY 
Sbjct: 64  AEKEGITPKELVDRNAEVYKAAHAALGITYDRFIRTTDADHYAASQAIWKKMEANGDIYL 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y GWYS+RDEA+Y +D+     DG  Y+ +    V W  EE YFFRLSAYQ+KLL+ Y
Sbjct: 124 SKYEGWYSVRDEAFYGEDDTVVKDDGVRYSKETDTEVTWTAEESYFFRLSAYQEKLLALY 183

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+ PEF  P  R NEVISFVK GL+DLS+SR TFDWG+ +P + +++MYVW+DALTNYLT
Sbjct: 184 EAQPEFGAPQYRFNEVISFVKRGLEDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLT 243

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D       K+WPAD+H+IGKDI RFHAIYWPAFL+SA L LPK+V  HGF+ + G
Sbjct: 244 GVGYPDVDSEKFRKYWPADVHIIGKDISRFHAIYWPAFLMSAGLELPKRVMIHGFLHNNG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+ P + + + G+D +RYF +RE+  G DG Y+ D +  R+NADLAN  GN
Sbjct: 304 VKMSKSLGNVVAPADFVAQYGLDQVRYFFLREVPFGADGSYNHDAIVGRMNADLANNFGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+ +G +P PG FT +D +IL+  + +LQ +R     Q   RAL  V  +
Sbjct: 364 LAQRSLSMVAKNCEGRVPVPGEFTAADNAILAQANGLLQTVRAVFDKQEFSRALEAVWGV 423

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + + YF  Q PW L+KT+  R +TVLYVT+EV+R +AIL Q  +P     +   L   
Sbjct: 424 LGDTNAYFAEQAPWVLRKTDVGRMNTVLYVTLEVLRIVAILAQPVMPAATASLLAALGQP 483

Query: 481 D-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + E R F ++   +  G  L     P+FP++
Sbjct: 484 EGEARQFAAIATPIAAGTGLPAP-SPVFPKY 513


>gi|163795498|ref|ZP_02189464.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
 gi|159179097|gb|EDP63630.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
          Length = 515

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 252/509 (49%), Positives = 344/509 (67%), Gaps = 5/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++T I Y N +PHIGHAY  +  D LARF RLDG DV+F TGTDEHGQK+  AA  
Sbjct: 3   RSYYVTTPIYYVNDKPHIGHAYTTLACDALARFKRLDGYDVMFLTGTDEHGQKVEAAADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV  + F D+ S+NFRD+  V++ S DDFIRTTE RH    + LW+++ +KG IY G Y
Sbjct: 63  AGVDPQSFTDRVSQNFRDLIGVMNCSTDDFIRTTEPRHVTAVQALWRRLKEKGHIYLGSY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWYS+RDEA+Y + E+    +G+       PV+W+EE  YFF LS +Q+ LL++YE++P
Sbjct: 123 AGWYSVRDEAFYVETELTT-VNGEKRAPSGAPVEWVEEPSYFFDLSKWQEPLLAFYEANP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFV+ GL+DLS+SR +F WG+ +PDD  +IMYVW+DALTNY+T  GY
Sbjct: 182 DFIAPESRRNEVLSFVRGGLRDLSVSRTSFKWGVPVPDDDAHIMYVWLDALTNYITAAGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D      +K WPADLH++GKDILRFHA+YWPAFL+ A L +PK+VF+HG+   +G+K+S
Sbjct: 242 PDTDGQ-YSKRWPADLHMVGKDILRFHAVYWPAFLMGAGLEVPKRVFAHGWWTVEGQKMS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDP  +++  G+D  RYF++RE+  G DG +    +  R+N++LAN +GNL  R
Sbjct: 301 KSLGNAIDPAALVDTYGLDQFRYFMLRELPFGNDGDFSHRAMINRMNSELANDLGNLSQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +SM+ K+  G +P PGAF  +DE++L     +L+  R     Q  H+AL  +  +V   
Sbjct: 361 VLSMVAKNCAGAVPQPGAFAAADEALLGAADALLESQRAAYDTQAFHKALDAIFDVVGRA 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RY D Q PW L+KT+P R +TVLY  VE IR +AILLQ  VP    ++ D L V  + R
Sbjct: 421 NRYVDEQAPWTLRKTDPARMATVLYTLVETIRHVAILLQPIVPGSCERMLDQLAVPADAR 480

Query: 485 CFQSL--DQRLKPGFMLHKTFDPIFPRFL 511
            F  L  D RL PG  L K  + +FPR++
Sbjct: 481 DFDRLTPDYRLVPGTPLPKP-EGVFPRWV 508


>gi|257427267|ref|ZP_05603668.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275918|gb|EEV07386.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 657

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGK 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|81429270|ref|YP_396271.1| methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|78610913|emb|CAI55965.1| Methionyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 681

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 205/519 (39%), Positives = 315/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   Y++T I YP+ +  IG++Y  I ADV+AR+ RL G DV F TGTDEHG K+ + A
Sbjct: 4   KKPTFYVTTPIYYPSGKLTIGNSYTTIAADVIARYKRLMGFDVFFLTGTDEHGLKLEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +  + +VD  +   + +   L+IS D FIRTT+  H    + ++ ++ ++GDIY G
Sbjct: 64  AEKNLAPQAYVDGMAEEIQALWKTLEISNDKFIRTTDDYHVKAVQKIFDRLVEQGDIYLG 123

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EVYK  +G+    +    + VQ + EE Y F++S Y D+L
Sbjct: 124 QYEGWYSVSDEEYFTESQLTEVYKDENGKVIGGKAPSGHEVQRVAEETYKFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L+YYE H +FI P  R+NE+I+   K GL+DLS+SR +FDWGI +  +P++++YVW+DAL
Sbjct: 184 LAYYEEHADFIEPSSRKNEMINNFIKPGLEDLSVSRISFDWGIHVTGNPKHVVYVWLDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY+T  GY  + D    K+WPAD+H++GK+I+RFHAIYWP FL++  LPLPK++F HG+
Sbjct: 244 SNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFLMALGLPLPKQIFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG +  +    R+N DLA
Sbjct: 304 LLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRAIPFGNDGVFTPEDFVSRINYDLA 363

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K  DG +P+     T  D  + +  ++ + +    M       AL
Sbjct: 364 NDLGNLLNRTVAMINKYDDGHVPSYQADVTAFDADLQATATQTIAQYSTLMDQLKFSDAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             +  L+S  ++Y D  +PW L K +  +A   +VL    E +R +A+LLQ  +     +
Sbjct: 424 DTIWQLISRANKYIDETEPWVLAKDDSRKAELDSVLAHLAESLRIVALLLQPVMTHAPRE 483

Query: 473 IFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +F  L +  D+    + +  R      +     PIFPR 
Sbjct: 484 MFAQLGLDFDQEAQREMVYGRFPSDIKVIAKGTPIFPRL 522


>gi|77411392|ref|ZP_00787739.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162565|gb|EAO73529.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 665

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 208/520 (40%), Positives = 326/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S   KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+   V+      +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLEAVMSHLAASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 520


>gi|22537699|ref|NP_688550.1| methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25011651|ref|NP_736046.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76788328|ref|YP_330181.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77413421|ref|ZP_00789613.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|22534588|gb|AAN00423.1|AE014263_2 methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413191|emb|CAD47270.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76563385|gb|ABA45969.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77160515|gb|EAO71634.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 665

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 209/520 (40%), Positives = 328/520 (63%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S   KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGATFDLEKLTFADLPEGVRVVAKGSPIFPRL 520


>gi|289450466|ref|YP_003475749.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185013|gb|ADC91438.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 672

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/511 (41%), Positives = 313/511 (61%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YIST I Y +   HIGH+Y  + AD +AR+ R+ G DV F TGTDEHG+KI + A+ 
Sbjct: 3   KKFYISTPIYYTSGNLHIGHSYSTVAADAMARYKRMAGNDVFFLTGTDEHGEKIQERAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FVD+     +D+  + +ISYD FIRTT+  H    + + +K+ D+GDIYK  Y
Sbjct: 63  AGKTPQAFVDELVSGIKDLWKLFNISYDKFIRTTDAEHMAGVKYIVQKLYDRGDIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    EA++ + ++  G           PV   +EE YFFRLS Y D+L+  +E HP
Sbjct: 123 EGWYCTPCEAFWTESQLKDG----CCPDCGRPVHKTKEESYFFRLSKYNDRLIKLFEEHP 178

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EF+ P  R NE+++   + GL+DL++SR +FDWGIK+P DP++++YVWIDAL+NY+T  G
Sbjct: 179 EFVQPESRANEMLNNFLRPGLQDLAISRTSFDWGIKVPFDPKHVVYVWIDALSNYITALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y         KFWPAD+H++GK+I+RFH I WPA L++ +LPLPK+V+ HG+IL K  K+
Sbjct: 239 Y-PENTAKFEKFWPADVHLVGKEIVRFHTIIWPALLMALDLPLPKQVYGHGWILFKEGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN++DP+ +     VDA+RYFL+RE+  G DG Y  + L  R+N+DLAN +GNL+S
Sbjct: 298 SKSKGNIVDPVVLCNRYTVDAIRYFLLREVPFGADGSYSNEALITRINSDLANDLGNLMS 357

Query: 364 RSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R+++MI K +   + P   +    DE +    S V       M       AL +V  L+ 
Sbjct: 358 RTIAMICKYFAGKLPPATPSINSEDERLRETASEVAASYVSYMDKMQFSLALGEVWRLIG 417

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + ++Y D   PW L K  T  +R + VL    EV+R ++I +  F+P+ A K+   L + 
Sbjct: 418 QANKYIDVTMPWLLAKDPTKQERLAAVLCNLGEVLRLVSIYIAPFMPETAEKMQAALHLT 477

Query: 481 DENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
           +  + F SL++  L        T +P+FPR 
Sbjct: 478 EAQKAFSSLNRFDLFATEQPLSTCEPLFPRL 508


>gi|268318773|ref|YP_003292429.1| hypothetical protein FI9785_278 [Lactobacillus johnsonii FI9785]
 gi|262397148|emb|CAX66162.1| metS [Lactobacillus johnsonii FI9785]
          Length = 658

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 206/520 (39%), Positives = 319/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++D+  +LD+SYD FIRTT+  H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDKMANSYKDLWKMLDVSYDRFIRTTDDDHVKAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDNDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P      E  + ++   +  + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVASEQDEFAKDLIKTANETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K    +  + V+    E +R +AIL+   + +   
Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKNEELAKVMTNLAESLRLIAILIAPVMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           ++F+ L +  +N   + LD         + +   PIFPR 
Sbjct: 481 QMFEQLGLDWKNDDQKKLDFGGFDWNIKVTEKPTPIFPRL 520


>gi|87162044|ref|YP_493176.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|161508736|ref|YP_001574395.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294850349|ref|ZP_06791082.1| metS [Staphylococcus aureus A9754]
 gi|87128018|gb|ABD22532.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|160367545|gb|ABX28516.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294822773|gb|EFG39209.1| metS [Staphylococcus aureus A9754]
 gi|315196171|gb|EFU26527.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320144201|gb|EFW35969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 657

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KSGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLNESIMVTGQPKPIFPRL 522


>gi|77408311|ref|ZP_00785053.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173074|gb|EAO76201.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 665

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 208/520 (40%), Positives = 327/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
              Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LDEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S   KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGATFDLEKLTFADLPEGVRVVAKGSPIFPRL 520


>gi|150387962|ref|YP_001318011.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149947824|gb|ABR46352.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 655

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 208/514 (40%), Positives = 319/514 (62%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+A+ HIGH Y  + ADVLARF R  G DV F TGTDEHG+KI +AA
Sbjct: 2   SKGTYYLTTPIYYPSAKLHIGHTYTTVAADVLARFKRTRGYDVQFLTGTDEHGEKIQEAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  K +VD+     + +   +DISYD FIRTT++ H    + +++ + +KGDIYK 
Sbjct: 62  QKNGMNPKAYVDEIVEEIKKVWKSMDISYDIFIRTTDEEHERAVQKIFQTLYEKGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++    + +       P    +EE YFF+LS YQD+L+ ++E 
Sbjct: 122 EYEGWYCTPCESFWTETQLK---EDKGCPDCGRPAHLAKEEAYFFKLSKYQDRLIEHFEK 178

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +PE   P  R+NE+++   + GL+DL +SR TFDWGI +P DP++++YVW DA+ NY+T 
Sbjct: 179 YPEICYPESRKNEMLNNFLRPGLEDLCVSRTTFDWGIPVPFDPKHVIYVWFDAVCNYITA 238

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    +    K+WPA++H++ K+I+RFH I WPA L++  +PLPK V+ HG+IL   +
Sbjct: 239 LGYTSENEEQYKKYWPANVHLVAKEIVRFHTIIWPAILMALEVPLPKMVYGHGWILFGSD 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++ P  +IE  G+DAL+YFL+RE   G+DG Y       R+NADLAN +GNL
Sbjct: 299 KMSKSKGNIVYPEPLIERYGIDALKYFLLREFTFGQDGNYTNRTFVTRLNADLANDLGNL 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+V+MI K   G+IP P    E DE + +V +    ++ + +     H AL ++  +V
Sbjct: 359 VSRTVAMIEKYNSGIIPEPKVAGEFDEDLRTVATGAAAKVEKAIDQLQFHEALEEIWKVV 418

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K   N +R +TVLY   + +R +++L+Q F+    NKI++ L +
Sbjct: 419 RRTNKYIDETTPWILAKDEENKERLNTVLYHLADTLRIVSVLIQPFMEATTNKIWEQLGI 478

Query: 480 -ADENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
            A++   ++  SL  ++  G  + K  + +FPR 
Sbjct: 479 DANQGTTWEDASLFNQIPSGVKVRK-GESLFPRL 511


>gi|51894387|ref|YP_077078.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51858076|dbj|BAD42234.1| methionyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 651

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 222/515 (43%), Positives = 315/515 (61%), Gaps = 17/515 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I YP+++ HIGH+Y  + AD LAR+HR  G +  F TGTDEHGQKI +AA   
Sbjct: 3   RFYITTPIYYPSSKLHIGHSYTTVAADALARYHRRLGHETYFLTGTDEHGQKIERAALAE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T   FVD+     +++   L ISYDDFIRTTE+RH    + ++K++ D+GDIYK  Y 
Sbjct: 63  GKTPIQFVDEIVAGIKELWAALHISYDDFIRTTEERHKKVVQKIFKQLYDQGDIYKSSYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY    E ++ + ++    +G        PV+W ++E YFFRLS Y D+LL  Y    +
Sbjct: 123 GWYCTPCETFWIESKL---KEGNLCPDCGRPVEWTKDESYFFRLSKYADRLL-RYIEETD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NE+ISF+  GL+DL +SR T  WGI +P D +  +YVWIDAL+NY++  G+ 
Sbjct: 179 FIQPASRKNEMISFINQGLEDLCVSRSTVRWGIPVPFDEKQTIYVWIDALSNYISALGWG 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--KGEKI 303
              D    KFWPAD+H++GK+I+RFH I WP  L++  LPLPKKVF HG++L   + EK+
Sbjct: 239 TENDELYRKFWPADVHLVGKEIVRFHTIIWPCILMALGLPLPKKVFGHGWLLFGTQAEKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  +I+  GVDA+RY+L+RE+  G DG Y ++    R N DLAN +GNL+S
Sbjct: 299 SKSKGNVVDPFVLIDRYGVDAVRYYLLREVPFGADGTYTEEAFILRTNNDLANDLGNLLS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+  MI K  DG +P P   ++ D  +  + ++VL+E +E M    I  AL  +  LV  
Sbjct: 359 RTTQMINKFSDGRVPEPDPASD-DRILSDLAAQVLREFQEAMDRLEISSALVALWKLVDR 417

Query: 424 VDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV- 479
            ++Y D Q PW L + +P RA    TVLY   E +R L + L  F+ +   +I+D L + 
Sbjct: 418 ANKYIDEQAPWALAR-DPGRAGQLRTVLYNLAETLRLLGVALTPFLVQTPERIWDQLGLE 476

Query: 480 ADENRCFQS----LDQRLKPGFMLHKTFDPIFPRF 510
             + R            LKPG ++ +   P+FPR 
Sbjct: 477 PAQVRTLPWEEAVAWGGLKPGTVI-RRGSPLFPRI 510


>gi|282915808|ref|ZP_06323576.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283768925|ref|ZP_06341834.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282320299|gb|EFB50641.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283461106|gb|EFC08192.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 657

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTVPIMVTGQPKPIFPRL 522


>gi|118469128|ref|YP_889680.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170415|gb|ABK71311.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 515

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 253/511 (49%), Positives = 355/511 (69%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAIAYPN  PHIGHAYE I  D +ARF RLDG DV + TGTD HGQK+A+ A  
Sbjct: 3   EPFYITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+       +NS  F+ + + L+IS+D FIRT++  H++  + +WK+++D GDIY   Y
Sbjct: 63  EGIPAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWYS+RDE ++ ++E  +  DG     +   PV W EE+ YFFRLSAY D+LL+ YE H
Sbjct: 123 KGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++SFV  GLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 183 PEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D    S  ++WPADLH+IGKDI+RFH +YWPAFL+SA LPLPK++F+HG++L++GEK+
Sbjct: 243 FPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLPLPKRIFAHGWLLNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYFL+RE+  G+DG Y++D +  RVNADLAN +GNL  
Sbjct: 303 SKSIGNVVDPVNLVDTFGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+    +P PG FT+ D ++L+    +L+ +RE+     +H AL  + S++  
Sbjct: 363 RSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHFDVPAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K     +  R  TVLY T+EV+R  ++LLQ  +P+   K+ D+L  
Sbjct: 423 ANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQ 482

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F ++  R+KPG  L      IFPR+
Sbjct: 483 PTDERDFSAIANRIKPGTSLPAP-SGIFPRY 512


>gi|300362468|ref|ZP_07058644.1| methionine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353459|gb|EFJ69331.1| methionine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 681

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 320/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 24  MAEKKTFYITTPIYYPSGKLTIGNAYTTIAADTMTRYKKSRGFDTFFLTGTDEHGLKIEQ 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++++  +LD+SYD FIRTT++ H    + +++K+  +GDIY
Sbjct: 84  KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 143

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFFR+S Y D
Sbjct: 144 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 203

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 204 RLLQYYKDHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 263

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 264 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 323

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 324 GWVLMKDGKMSKSKGNAVYPEMIVKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 383

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P      E  + ++   +  + E +++M      +
Sbjct: 384 LANDLGNLLNRTVSMINQYQDGQVAPVAAEQDEFAQDLIKTANETIAEYQKHMDALHFSQ 443

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K    +  S V+    E +R +AIL+   + +   
Sbjct: 444 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 503

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +   N   + L+         + +   PIFPR 
Sbjct: 504 KMFEQLGLDWNNEEQKKLEFGGFDWNVKVTEKPTPIFPRL 543


>gi|254469852|ref|ZP_05083257.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961687|gb|EEA96882.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 517

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 278/513 (54%), Positives = 370/513 (72%), Gaps = 4/513 (0%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+TAI+YPN +PHIGHAYE I  DVLARF RLDG +V F TGTD HGQK+ +
Sbjct: 1   MTEKSPFYITTAISYPNGEPHIGHAYEAIATDVLARFQRLDGREVHFLTGTDVHGQKMLQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++     D+NS+ FR+M ++L  S DDFI+T E+RH+ +C+ +W+K++D GDIY
Sbjct: 61  TAVKEGMSPSDLADKNSKLFREMVEMLGCSNDDFIQTNEERHYKSCQAIWQKMADAGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY + E     DG  Y  Q  PV+W+EEE YFFRLSAY+DKL+  Y
Sbjct: 121 KDSYAGWYSVRDEAYYQEGETEVREDGVRYGPQGTPVEWVEEESYFFRLSAYEDKLIELY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  RRNEV+SFVK GLKDLS+SR TFDWGI +P D +++MYVW+DALTNY+T
Sbjct: 181 EKNPDFIGPNARRNEVMSFVKGGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D      AKFWPA+ H+IGKDI+RFHA+YWPAFL+SA +PLP++VF+HGF+ + G
Sbjct: 241 ALGYPDMDG-DMAKFWPANAHIIGKDIIRFHAVYWPAFLMSAGVPLPERVFAHGFLFNSG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNVI P +++E  G+D +RYF +RE+  G+DG Y+ + +  R+NADLAN IGN
Sbjct: 300 EKMSKSLGNVIAPRDLVETYGLDQIRYFFLREVPFGQDGNYNHEAMVNRINADLANDIGN 359

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PG F+  D++IL     +L++ R  M  Q IH ALA + S 
Sbjct: 360 LAQRSLSMIFKNCEGKLPVPGEFSADDKAILQQADEMLEKCRGFMAKQEIHHALACIWST 419

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +Q+PW LKKT P+R  TVLY T E+IRQ+ IL Q  +P  A K+ D+L ++
Sbjct: 420 VGEANRYFASQEPWALKKTEPERMGTVLYTTAEIIRQVGILAQPVMPTSAGKLLDLLVLS 479

Query: 481 DENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           D+ R F  L +  RL+ G  L K    +FPR++
Sbjct: 480 DDERSFAELGEAGRLQGGRELPKP-QGVFPRYV 511


>gi|295396171|ref|ZP_06806353.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970959|gb|EFG46852.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 527

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 252/512 (49%), Positives = 345/512 (67%), Gaps = 8/512 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++TAIAYPN  PHIGHAYE I +D +ARF RL G DV   TGTDEHG K+ ++AQ A
Sbjct: 2   TFYMTTAIAYPNGAPHIGHAYEYIASDTIARFKRLTGEDVFMLTGTDEHGLKMQQSAQKA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D+N+  FR + D L  SYD FIRTT+  H+   + LWKK+ + GDIY   Y+
Sbjct: 62  GITPRELADKNAAGFRALHDALGSSYDRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTYA 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYE--- 181
           GWYS+RDEAYY  DE     DG+ Y      PV+W EEE YFF+LSAY+++LL + +   
Sbjct: 122 GWYSVRDEAYYAADETEVREDGERYAIATGTPVEWTEEESYFFKLSAYEERLLEWLDSVD 181

Query: 182 -SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +    + P  RRNEV+SF+K GLKDLS+SR TFDWG+ +P + +++MYVW+DALTNYLT
Sbjct: 182 DTGRHPVGPDVRRNEVVSFIKGGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYLT 241

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +       + WP +LHV+GKDILRFHA+YWPAFL+SA L LPK+V +HGF+ +KG
Sbjct: 242 GAGYPNVDSEEFQQRWPCELHVVGKDILRFHAVYWPAFLMSAGLELPKRVHAHGFLFNKG 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+GNV+DP ++++  G+D LRYFL+REI+ G+DG Y    +  R NADLAN  GN
Sbjct: 302 EKMSKSVGNVVDPYDLVDAFGLDTLRYFLLREISYGQDGSYSAGAIIGRKNADLANEYGN 361

Query: 361 LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           LV RS SM+ K+  G++P       T+ D ++L     +L+ +   +  Q +HR +  + 
Sbjct: 362 LVQRSTSMVAKNLSGVVPEVSEADLTDDDRALLERTDGLLERVTAFVDVQELHRYVEALW 421

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++ E +RYF AQ+PW+LKKT+PDR   VLYVT+EV+R+++IL Q  +P+   K+   L 
Sbjct: 422 RVLEETNRYFSAQEPWKLKKTDPDRMGVVLYVTLEVLRRVSILAQPVMPESTGKVLTQLG 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           VA++ R F    Q L  G  L     P+FPR+
Sbjct: 482 VAEDARTFNDFGQWLPAGTELPAPA-PVFPRY 512


>gi|258424475|ref|ZP_05687354.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845344|gb|EEV69379.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 657

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTT++RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTKERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTEPIMVTGQPKPIFPRL 522


>gi|303231911|ref|ZP_07318620.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513440|gb|EFL55473.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 649

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 318/515 (61%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTFYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDFIRTT+ RH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDARHEKVVQELFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++    +         PV+ ++EE YFF+L  Y D+ L + E 
Sbjct: 124 EYEGWYCTPCESFWTEQKLG---ENHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       KFWPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKFWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDP  +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPNPLIDIYGADSLRYYLLSEITLGHDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D+ I S+  + + +    M+   +++AL  V + +S
Sbjct: 361 NRTIAMIEKYHGGIITKTDDVDDLDKEISSLAEQTVADFESQMEAMELNKALKTVWAFIS 420

Query: 423 EVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K++ +    R  +V+Y   E +R +A+L+   +P  A KI++ L 
Sbjct: 421 RMNKYIDETMPWVLAKSSDEADVHRLKSVMYHLAESLRIIAVLVSPVIPVGAPKIWEQLG 480

Query: 479 VAD-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +   E+     +     ++ G  + K  +PI+PRF
Sbjct: 481 LGGFEDVQLDDVRTWGGIQTGTKVVK-GEPIYPRF 514


>gi|291288265|ref|YP_003505081.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885425|gb|ADD69125.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 644

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 218/516 (42%), Positives = 316/516 (61%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I Y N  PHIGHAY  +  D ++R+ RL G DV F TGTDEHGQKI +
Sbjct: 1   MTGK-TFYVTTPIYYVNDVPHIGHAYTTVACDTISRYKRLCGFDVCFLTGTDEHGQKIEQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G+T K   D+  + F  +  +L+IS D FIRTT++ H    R ++ K+ + GDIY
Sbjct: 60  AAQKRGITPKALADEVVQRFAGLWKILNISNDKFIRTTDELHKKAVRKIFDKMKENGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWY    E Y  + ++    DG    +       ++E  YFFR+S Y D+LL + 
Sbjct: 120 LDHYEGWYCTPCETYLTETQLL---DGNCCPSCGRETAKLKEPSYFFRMSKYADQLLKHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E + +F+ P  RRNE+ISF+K GL+DLS+SR TF WGI +PD P++++YVWIDALTNY+ 
Sbjct: 177 EDNKDFVRPESRRNEIISFIKDGLRDLSVSRVTFKWGIPVPDAPEHVIYVWIDALTNYIA 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY ++      KFWPAD HV+GKDILRFH +YWP  L+SA LPLPK VF+HG+   +G
Sbjct: 237 ALGYGEDDA-DFQKFWPADYHVVGKDILRFHTVYWPTMLMSAGLPLPKSVFAHGWWTVEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGN IDP  ++++ GVD++RYFL+RE+  G DG +    L  R+N DLAN +GN
Sbjct: 296 QKMSKSLGNAIDPAWLVDKFGVDSIRYFLLREVPFGLDGDFSFKALIHRINGDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R++ M+ + +DG++P      + D+ +     RV +E+ E++ N   ++AL     L
Sbjct: 356 LLNRTMGMVNRYFDGVVPAYTEAGDEDKPLEETIERVFREVDEHITNMAFNKALMTTWEL 415

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VS +++Y D   PW L K      R  +VLY  ++ IR +++LL  F+P+ A K+   L 
Sbjct: 416 VSALNKYIDETAPWALAKDETRKGRLGSVLYSVLDGIRLVSLLLYPFMPETAVKMRRQLG 475

Query: 479 VADENRCFQSLDQR----LKPGFMLHKTFDPIFPRF 510
            A E       + R     + G  L +  + +FPR 
Sbjct: 476 TAQELEKSDVEELRKIRTFEAGHKLGEA-EQLFPRI 510


>gi|70727520|ref|YP_254436.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|82582279|sp|Q4L3E7|SYM_STAHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68448246|dbj|BAE05830.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 659

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 216/520 (41%), Positives = 326/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV++R+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVISRYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKSLWSKLEISNDDFIRTTEDRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+++P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDDELFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYEGPKHELDEDMEALAHETVKHFNESMESFQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRFAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVAD-ENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           F  L + + E    +SL+Q   LK   M+ +   PIFPR 
Sbjct: 483 FKQLNINEPELFELESLEQYGALKQPIMVTEKPTPIFPRL 522


>gi|300214134|gb|ADJ78550.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Lactobacillus salivarius CECT 5713]
          Length = 675

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/522 (40%), Positives = 322/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++   K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP   +  T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|314932712|ref|ZP_07840082.1| methionine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654542|gb|EFS18294.1| methionine--tRNA ligase [Staphylococcus caprae C87]
          Length = 657

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 216/523 (41%), Positives = 326/523 (62%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI +
Sbjct: 1   MMAKDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY
Sbjct: 61  KAQKAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE YY + ++           G       + V+ ++EE YFF ++ Y D
Sbjct: 121 LGEYEGWYSVPDETYYTESQLVDPVYENGEIIGGKSPDSGHEVELVKEESYFFNINKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWID
Sbjct: 181 RLLEFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 241 ALVNYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 301 GWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K + G +P   G   E DE + ++    ++   ENM++     
Sbjct: 361 LANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSV 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V   +S  ++Y D  +PW L K    R     V+   VE IR  A+LLQ F+    
Sbjct: 421 ALSTVWKFISRTNKYIDETQPWVLAKDENQRDMLGNVMAHLVENIRFAAVLLQPFLTHAP 480

Query: 471 NKIFDILFVADENRC-FQSLD--QRLKPGFMLHKTFDPIFPRF 510
            ++F  L + D     F+SL+    L    ++ +   PIFPR 
Sbjct: 481 REVFKQLNMNDPKLSQFESLESYGALTEPILVTEKPTPIFPRL 523


>gi|253730957|ref|ZP_04865122.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725307|gb|EES94036.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 657

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 321/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K ++G +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFNGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLDNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLAQYGVLTESIMVTGQPKPIFPRL 522


>gi|161506812|ref|YP_001576766.1| methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160347801|gb|ABX26475.1| Methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 658

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 205/520 (39%), Positives = 318/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++   K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    G+D LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMRALPFGADGIFTPEDFIERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P P A  +  + +    + V+ + RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVPVAQDKLGKDLQDTAASVIADYREQMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    D  S V+    E +R +AI++   + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  ++   ++L          + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTKVVEKPKPIFPRL 520


>gi|28377354|ref|NP_784246.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254555549|ref|YP_003061966.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|308179569|ref|YP_003923697.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258344|sp|Q88Z97|SYM_LACPL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28270186|emb|CAD63085.1| methionine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044476|gb|ACT61269.1| methionine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|308045060|gb|ADN97603.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 683

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 207/522 (39%), Positives = 308/522 (59%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D LAR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ETKPTYYITTPIYYPSGKLHIGNSYTTIACDTLARYKRAMGYDVYFLTGTDEHGLKIEEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+      K +VD  ++  +D+  +L+IS D FIRTT+  H    + ++ ++   GDIY 
Sbjct: 63  AEKLNTDPKSYVDGMAKQIKDLWQLLEISNDKFIRTTDDYHERAVQEIFDRLLKNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EV++  +G+    +    + V+ ++E+ YFF++S Y D 
Sbjct: 123 GEYEGWYSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YY+SHP+FI P  R  E+I+   K GL+DL++SR +F WG+ +  DP++++YVWIDA
Sbjct: 183 LLDYYQSHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           LTNY+T  GY          KFWPAD+ ++GK+I+RFH IYWP  L +  LPLPKKVF H
Sbjct: 243 LTNYITALGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKKVFGH 302

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNVI P  ++E  G+DALRY+LV+ +  G DG +  +    RVN D
Sbjct: 303 GWLLMKDGKMSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYD 362

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P   A  TE D  + +  +  ++     M +  +  
Sbjct: 363 LANDLGNLLNRTIAMINKYEDGQLPAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSD 422

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPK 468
           ALA+V  LVS  ++Y D   PW+L K++     D+ ++V+      +R +A L+   +  
Sbjct: 423 ALAEVWKLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTH 482

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
              +IF  L +         L    L  G  +     PIFPR
Sbjct: 483 APKEIFTQLGLDPATLAIADLQLADLPAGAQVVAKGTPIFPR 524


>gi|224475632|ref|YP_002633238.1| methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420239|emb|CAL27053.1| Methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 667

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 220/521 (42%), Positives = 327/521 (62%), Gaps = 14/521 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + A 
Sbjct: 3   KDTFYITTPIYYPSGKLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAH 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV+   ++D+     + + + L+IS DDFIRTTEKRH +    +++++ ++GDIY G 
Sbjct: 63  KAGVSELEYLDEMISGIKSLWEKLEISNDDFIRTTEKRHEEVVAKVFERLLEQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQYY----NAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y GWYS+ DE YY +   +E     +G+          + V+ ++EE YFF +S Y D+L
Sbjct: 123 YEGWYSVPDETYYTESQLEEPVYDDNGKIIGGKSPDSGHEVELVKEESYFFNISKYADRL 182

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L++Y+ HPEFI P  R+NE+I+   K GL DL++SR TFDWG+++P +P++++YVWIDAL
Sbjct: 183 LAFYDEHPEFIQPPSRKNEMINNFIKPGLTDLAVSRTTFDWGVQVPSNPKHVVYVWIDAL 242

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY++  GYL   D    K+WPADLH++ K+I+RFH+I WP  L++ +LPLPK+VF+HG+
Sbjct: 243 VNYISALGYLSEDDSLFKKYWPADLHLMAKEIVRFHSIVWPILLMALDLPLPKRVFAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +    R N DLA
Sbjct: 303 ILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVDRTNFDLA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNLV+R+++MI K +DG +P   G   E D  +       ++E  ENM+N     AL
Sbjct: 363 NDLGNLVNRTIAMINKYFDGELPAYEGPKHELDAEMEQFALDTVKEYHENMENLQFSVAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + V   +S  ++Y D   PW L K +  +     V+   VE IR   +LL+ F+     +
Sbjct: 423 STVWKFISRTNKYIDETTPWVLAKDDSQKEMLGNVMAHLVENIRFATVLLRPFITHAPRQ 482

Query: 473 IFDILFV-ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           IF+ L + + E   F SL++   LK    + +   PIFPR 
Sbjct: 483 IFEQLNINSPELFGFDSLNEYGALKAPISVTEKPQPIFPRL 523


>gi|260584776|ref|ZP_05852521.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157433|gb|EEW92504.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 670

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 332/522 (63%), Gaps = 13/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y++T I YP+ Q HIGHAY  + +D + R+ +L G D  F TGTDEHGQKI + 
Sbjct: 3   EDKKTFYLTTPIYYPSGQLHIGHAYTTVASDAMIRYKKLQGYDTYFLTGTDEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ AGV+   FVD      +D+   LD+SYDDFIRTT+ RH  + + +++K+ D GDIY 
Sbjct: 63  AQEAGVSEIEFVDNIIFGIQDLWKKLDVSYDDFIRTTQPRHKKSVQKIFQKLMDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+ ADG+         + VQ ++EE YFFR+S Y D+
Sbjct: 123 GEYEGWYSVSDEEYFTESQLVEVYRDADGKMIGGVAPSGHEVQLVKEESYFFRMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YYE HPEFI P  R+NE+I+   K GL+DL++SR +FDWGI +P+DP++++YVWIDA
Sbjct: 183 LLQYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTSFDWGIPVPNDPKHVIYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + +    ++WPAD+H IGK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 243 LSNYITALGYGSDDETLFNRYWPADVHFIGKEIVRFHTIYWPIMLMALDLPLPKKIFAHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+DALRY+L+RE+  G DG +  +   +R+N DL
Sbjct: 303 WLLMKDGKMSKSKGNVVDPNTLIERYGLDALRYYLLREVPFGSDGIFTPESFVERINYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K +DG IPT  A  +  D  ++     +++E+   M+      A
Sbjct: 363 ANDLGNLLNRTVAMINKYFDGTIPTYSAPVSSFDHELVEASKVMIEEVEAAMEEMQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ +   VS  ++Y D   PW   K     +  +  +    E +R +A+ LQ F+ +   
Sbjct: 423 LSAIWKFVSRTNKYIDETTPWAAVKDEARQEELARTMSYLAESLRIIAVALQPFLTQTPG 482

Query: 472 KIFDILFVADEN-RCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +I   L + DE  R + SL     +  G  + +   PIFPR 
Sbjct: 483 EILAQLGIHDEALRDYPSLHTFGVIPAGTTVVEKGQPIFPRL 524


>gi|257439196|ref|ZP_05614951.1| methionine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198329|gb|EEU96613.1| methionine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 666

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 215/512 (41%), Positives = 320/512 (62%), Gaps = 7/512 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIGH+Y  +  D LARF R+ G +V+F TGTDEHGQKI  
Sbjct: 1   MSEHNTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGKEVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H +TC+ ++ ++ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDRIVATVKDLWKLLDVSYDRFIRTTDDYHVETCQKIFTQLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ D ++  G            V    EE YFF+   Y D+LL YY
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGK----CPDCGREVYDAHEEAYFFKTGKYADRLLKYY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+NY++
Sbjct: 177 EENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++L  G
Sbjct: 237 ALGYGNETYHDYNKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWLLMNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ + +  GVD++RYFL+REI  G DG +  + L  R+N+DLAN +GN
Sbjct: 297 GKMSKSVGNVVDPVVLCDRYGVDSIRYFLLREIPFGNDGMFTNEALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M  K + G +         D  + ++ + +L ++  +M N  I +AL ++ ++
Sbjct: 357 LLSRTVAMCEKYFGGTVHKAAGTEAIDTELETMVNELLGKVTADMDNLTIPQALMEIFAV 416

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ D L 
Sbjct: 417 IQRANKYIDETAPWALAKDEANKARLESVLYHLCEALRVAGILLNAYLPSTAPKMMDQLG 476

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++  +         ++  + +HK  D +FPR 
Sbjct: 477 LSTADIDLSKAAYGVQETYTVHK-GDALFPRI 507


>gi|300767096|ref|ZP_07077009.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300495634|gb|EFK30789.1| methionine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 689

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 207/522 (39%), Positives = 308/522 (59%), Gaps = 14/522 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D LAR+ R  G DV F TGTDEHG KI + 
Sbjct: 9   ETKPTYYITTPIYYPSGKLHIGNSYTTIACDTLARYKRAMGYDVYFLTGTDEHGLKIEEK 68

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+      K +VD  ++  +D+  +L+IS D FIRTT+  H    + ++ ++   GDIY 
Sbjct: 69  AEKLNTDPKSYVDGMAKQIKDLWQLLEISNDKFIRTTDDYHERAVQEIFDRLLKNGDIYL 128

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EV++  +G+    +    + V+ ++E+ YFF++S Y D 
Sbjct: 129 GEYEGWYSVDDEEYFTETQLAEVFRDDNGKVIGGKAPSGHEVELVKEQSYFFKMSKYADW 188

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YY+SHP+FI P  R  E+I+   K GL+DL++SR +F WG+ +  DP++++YVWIDA
Sbjct: 189 LLDYYQSHPDFIEPANRMTEMINNFIKPGLEDLAVSRTSFTWGVPVKSDPKHVVYVWIDA 248

Query: 235 LTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           LTNY+T  GY          KFWPAD+ ++GK+I+RFH IYWP  L +  LPLPKKVF H
Sbjct: 249 LTNYITALGYATGDSEDLFNKFWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKKVFGH 308

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNVI P  ++E  G+DALRY+LV+ +  G DG +  +    RVN D
Sbjct: 309 GWLLMKDGKMSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYD 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+++MI K  DG +P   A  TE D  + +  +  ++     M +  +  
Sbjct: 369 LANDLGNLLNRTIAMINKYEDGQLPAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSD 428

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPK 468
           ALA+V  LVS  ++Y D   PW+L K++     D+ ++V+      +R +A L+   +  
Sbjct: 429 ALAEVWKLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTH 488

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
              +IF  L +         L    L  G  +     PIFPR
Sbjct: 489 APKEIFTQLGLDPATLAIADLQLADLPAGAQVVAKGTPIFPR 530


>gi|317506073|ref|ZP_07963901.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974]
 gi|316255645|gb|EFV14887.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974]
          Length = 514

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 259/509 (50%), Positives = 340/509 (66%), Gaps = 4/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   YI+TAI Y N  PH GHAYE I AD LARF RLDG +V F+ G DE+G K+ ++A
Sbjct: 2   TRTPYYITTAITYANGTPHFGHAYEFISADALARFARLDGKEVFFSMGMDEYGLKVQQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GV+ + FVD+ +  FR++   L  SYD FIRTTE  H    + LW+++S  GD+Y+G
Sbjct: 62  EKEGVSPQAFVDRVAERFRELHAALGSSYDRFIRTTEPAHAKASQELWRRMSANGDVYEG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYY-NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y+GWYS+RDEA+Y ++E   G DG         PV W EE  YFFRLSAYQD+LL  Y+
Sbjct: 122 RYAGWYSVRDEAFYGEEETQLGEDGVRIAIPTGTPVAWTEESTYFFRLSAYQDRLLQLYQ 181

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++SFV  GLKDLS+SR +F+WG+ +PD P ++MYVW+DALTNYLT 
Sbjct: 182 EHPEFIGPESRRNEIVSFVSQGLKDLSISRSSFNWGVPVPDSPGHVMYVWVDALTNYLTA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D+   + AKFWPADL +IGKDI RFHA+YWPAFLLSA    PK+VF HGF+L+KG+
Sbjct: 242 IGFPDDTA-NVAKFWPADLEIIGKDITRFHAVYWPAFLLSAGFEPPKRVFGHGFVLNKGQ 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS G  +DP  ++E  G DA+R+F +REI  G+DG Y  + +  R NADL+NG+GNL
Sbjct: 301 KMSKSAGTGLDPFWLVETFGQDAVRFFALREIPYGQDGSYSDEAIVTRANADLSNGLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R ++MI K++ G +P P AF+  DE++L     +L E R + + Q    ALA V  LV
Sbjct: 361 AQRCLTMIAKNFGGAVPRPAAFSAEDEALLGRADALLAEYRPHFEAQRPDLALAAVFDLV 420

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           S+ + YF AQ PW L K + DR  +VLYVT EV+RQ AILLQ  +P+   K+ D+L    
Sbjct: 421 SQANGYFTAQAPWTL-KEDLDRMGSVLYVTAEVVRQAAILLQPAMPQATEKLLDLLGQEA 479

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             R F  L  R+ PG  L +    +FPR 
Sbjct: 480 AARSFADLASRISPGLALPEPH-AVFPRL 507


>gi|227891852|ref|ZP_04009657.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius ATCC 11741]
 gi|227866315|gb|EEJ73736.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius ATCC 11741]
          Length = 675

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/522 (40%), Positives = 322/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++   K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP   +  T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|77406524|ref|ZP_00783576.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77174863|gb|EAO77680.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 665

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 208/520 (40%), Positives = 326/520 (62%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S   KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVEXXGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +L+S  ++Y D   PW L K  T+ D+   V+      +R +A L+Q F+ + +
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLEAVMSHLAASLRVVAHLIQPFMMETS 480

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + I + L +       +     L  G  +     PIFPR 
Sbjct: 481 DAIMEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 520


>gi|153956357|ref|YP_001397122.1| methionyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856672|ref|YP_002473794.1| hypothetical protein CKR_3329 [Clostridium kluyveri NBRC 12016]
 gi|146349215|gb|EDK35751.1| MetS [Clostridium kluyveri DSM 555]
 gi|219570396|dbj|BAH08380.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 644

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 210/511 (41%), Positives = 318/511 (62%), Gaps = 8/511 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+A  HIG+ Y  + AD LARF R+ G DV+  TGTDEHGQKI + A
Sbjct: 2   TKGTYYITTPIYYPSANLHIGNTYTTVAADALARFKRITGYDVMLLTGTDEHGQKIQRLA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GV  K +VD+     +D+  +++I+YD FIRTTEK H    + ++KK+ D+GDIYKG
Sbjct: 62  EAKGVPPKEYVDEIVAGIKDLWKIMNINYDKFIRTTEKYHIAAVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ + ++  G            V+  +EE YFF++S Y   L+ + E+
Sbjct: 122 NYEGWYCTPCESFWTETQLIDGK----CPDCGRTVEKAKEEAYFFKMSKYAPALIKHIET 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++   K GL+DL +SR +FDWGI +  D ++++YVWIDAL NY+T 
Sbjct: 178 HPDFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDNKHVIYVWIDALANYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    K+WPA++H++GKDILRFH IYWP  L++    +P+KVF HG++L  G 
Sbjct: 238 LGYGSEDDKLYKKYWPANVHLVGKDILRFHTIYWPIMLMALGEEIPEKVFGHGWLLVDGG 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ ++   G DA+RY+L+REI  G DG ++ +   K++N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPVVLVNHFGTDAVRYYLLREIPFGADGLFNNEIFIKKINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+ +MI K +DG++P P    + D+ ++ +   +  +I ++M +  I  AL  +  LV
Sbjct: 358 LSRTCTMIEKYFDGIMPAPKEKEDIDDELIGLALDIPIKIEKHMNHLRIPEALDSIWELV 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S  ++Y D   PW L K     DR  TVLY   E +R +++ L AF+P+ + KI+  L V
Sbjct: 418 SRTNKYIDETTPWILAKDESKKDRLGTVLYNLSESLRIISVCLSAFLPETSEKIYKQLNV 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              +    +     + G  ++K  D +FPR 
Sbjct: 478 EVTSWDSIASFDGTRSGTKVNK-GDILFPRI 507


>gi|260893945|ref|YP_003240042.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260866086|gb|ACX53192.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 512

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 225/512 (43%), Positives = 329/512 (64%), Gaps = 10/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI+T I YP+ + HIGHAY  + AD +ARF R++G DV F TG DEHGQKI + A+
Sbjct: 2   RGKFYITTPIYYPSDRLHIGHAYTTVAADTVARFKRMEGYDVFFLTGADEHGQKIERTAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G   + +VD+   +F+++   L+ISYDDFIRTTE RH    + +++K+ ++GDIYK  
Sbjct: 62  SKGKDPQSYVDEIVASFKELWARLEISYDDFIRTTEPRHKVVAQKIFQKLYEQGDIYKST 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E ++   ++  G           PV+ ++EE YFFRLSAY D+LL+Y E H
Sbjct: 122 YQGWYCTPCETFWTARQLVDGK----CPDCGRPVELLQEESYFFRLSAYADRLLAYIEEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEVISF++ GL+DL +SR TF WGI +P DP++++YVWIDALTNYL+  G
Sbjct: 178 PDFIQPPARRNEVISFIRGGLEDLCVSRTTFSWGIPVPFDPRHVIYVWIDALTNYLSALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y    D    ++WPAD+H++GKDI+RFHAI WP+ L++  L LP++V  HG++L +G K+
Sbjct: 238 YGTEDDERFKRYWPADVHLVGKDIVRFHAIIWPSILMALGLELPRRVVGHGWLLVEGGKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVIDP  +I++ GVDA+RY+L+RE+A G DG Y++  L KR+N DLAN +GNL+ 
Sbjct: 298 SKSKGNVIDPHYLIDKYGVDAVRYYLLRELAFGADGEYEEKNLVKRLNYDLANDLGNLLY 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++++ K  +G+I  P      D+ ++++       + E +    +  ALA +  LV  
Sbjct: 358 RTLTVLEKYGEGVIGEPVEKEGPDDELIALAISTPARVAELVDQLQLSEALAAIWQLVGR 417

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480
            ++Y D   PW L K      R  TV+Y  +EV R + +LL  F+P    +++  L +A 
Sbjct: 418 ANKYLDETAPWRLGKDPGRKKRFDTVIYNVLEVYRFITVLLGPFMPGFPPRVWPQLGIAS 477

Query: 481 -DENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
                 F+SL   +L PG  + K  +P+FPR 
Sbjct: 478 LPALHTFESLKWGQLPPGIRVAK-GEPLFPRL 508


>gi|238855586|ref|ZP_04645888.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664778|ref|ZP_05865629.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932728|ref|ZP_06338136.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472661|ref|ZP_07813150.1| methionine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831803|gb|EEQ24138.1| methionine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529379|gb|EEQ68380.1| methionine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561261|gb|EEX27234.1| methionyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303138|gb|EFA95332.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 662

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/518 (39%), Positives = 318/518 (61%), Gaps = 9/518 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  ++ ++++   LDISYD FIRTT+  H  + + +++K+  +GDIY
Sbjct: 61  KAEKAGIKPQEYVDNMAKQYKELWKKLDISYDKFIRTTDADHVKSVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EV+K  +G+         + VQ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLKYYKENPDFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   +K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI +   G++  P +  +    +    +  + E ++ M      +A
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGLVTKPASQDDLGSDLAKAANETVVEYQKQMDALHFSQA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  +   V   ++Y D   PW L K    +  + V+    E +R +AI++   + +   K
Sbjct: 421 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAK 480

Query: 473 IFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           IF  L +  E+   ++L+         + +   PIFPR
Sbjct: 481 IFTQLGLNFEDETQKALEFGAFAWNIKVTEKPTPIFPR 518


>gi|90961208|ref|YP_535124.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
           [Lactobacillus salivarius UCC118]
 gi|90820402|gb|ABD99041.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Lactobacillus salivarius UCC118]
          Length = 675

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 212/522 (40%), Positives = 321/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++   K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALCNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+  +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMIAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP   +  T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILAKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|169830260|ref|YP_001716242.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637104|gb|ACA58610.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 516

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 209/512 (40%), Positives = 308/512 (60%), Gaps = 9/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+   HIGHAY  + AD +ARF RL G DV F TG+DEHGQKI + A
Sbjct: 4   GKPPFYITTPIYYPSDNLHIGHAYTTVAADTVARFKRLTGYDVYFLTGSDEHGQKIERTA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G   + +VD+    F+ +   L+I Y DFIRTTE RH      +++++ ++GDIYK 
Sbjct: 64  AARGKNPQEYVDEIVAGFKRLWSRLEIDYSDFIRTTEDRHKRVVTDIFRRLHEQGDIYKS 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++ D +V +G           PV+ + EE YFFR S Y ++LL++ + 
Sbjct: 124 SYEGLYCTPCEAFWTDRQVVEGN----CPDCGRPVELVAEESYFFRQSRYAERLLAHIDR 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P+ RRNEV+SF+K GL+DL +SR TF+WGI +P DP++++YVW+DALTNY++  
Sbjct: 180 NPDFIQPVSRRNEVVSFIKMGLEDLCVSRTTFNWGIPVPFDPRHVIYVWVDALTNYISAL 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            Y    D    ++WP D+H++GKDI+RFH I WP  L++A +PLPK+V  HG+++ +  K
Sbjct: 240 NYGAEDDSLYRRYWPVDVHLVGKDIVRFHCIIWPIILMAAGIPLPKRVVGHGWLMLESGK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP  +I+  GVDA+RY+L+RE+  G DG+Y +D L +R+N DLAN +GNL+
Sbjct: 300 MSKSKGNVVDPFVLIDRYGVDAIRYYLLREMLFGADGYYSEDNLIRRINVDLANDLGNLL 359

Query: 363 SRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           SR+ +MI K  DG I  PG A    D  ++ +      E+   +    +  AL  ++ LV
Sbjct: 360 SRTTAMIDKYLDGEIQAPGPADDPLDRELIDLALITPGEVAGLVNELDLSAALGAIMKLV 419

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y +   PW L K      R + V+Y   E  R   +LL  F+P    +++  L +
Sbjct: 420 GRANKYIEETAPWTLAKDPAKKQRLAGVMYNLAESYRIATVLLSPFMPGFPARVWPQLGI 479

Query: 480 A--DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           A   E   ++SL     P         P+FPR
Sbjct: 480 AGRPELHTWESLTWGRLPAGTRIARGAPLFPR 511


>gi|163853584|ref|YP_001641627.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665189|gb|ABY32556.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 522

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 278/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + +   PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D    + A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAQAPN-ARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+    + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
              R F     + RL+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEHRLQGGTALPAPA-PIFPRF 515


>gi|223044412|ref|ZP_03614445.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442201|gb|EEE48313.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 656

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 324/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGEIVGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDEELFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   ENM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D  +PW L K    R     V+   VE IR  A+LLQ F+     ++
Sbjct: 423 TVWKFISRTNKYIDETQPWVLAKDEDQRDMLGNVMAHLVENIRFAAVLLQPFLTHAPREV 482

Query: 474 FDILFVADENRC-FQSLD--QRLKPGFMLHKTFDPIFPRF 510
           F  L + D      +SL+    L    ++ +   PIFPR 
Sbjct: 483 FKQLNMNDPKLSQLESLESYGALTEPILVTEKPTPIFPRL 522


>gi|255505903|ref|ZP_05348810.3| methionine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265208|gb|EET58413.1| methionine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 661

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 319/515 (61%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K Y++TAIAY + +PHIG+ YE+I+AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 10  EKKKFYMTTAIAYTSGKPHIGNTYEIILADAIARFKRAQGYDVFFQTGTDEHGQKIELKA 69

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K +VD+ +   + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG
Sbjct: 70  AEAGVTPKEYVDKVAGEVKRIWDLVNASYDKFIRTTDDYHEKQVQKIFKKLYEQGDIYKG 129

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            V+  +EE YFFR+S Y D+L+ +  +
Sbjct: 130 SYEGMYCTPCESFWTESQLVDGK----CPDCGREVKPAKEEAYFFRMSKYADRLIEHINT 185

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DALTNY+T 
Sbjct: 186 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITG 245

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 246 IGYDCDGESTEQFKKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 305

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + L +R+N+DLAN +G
Sbjct: 306 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFDNDGVITWELLVERLNSDLANTLG 365

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     D  + +V     +++ E M+   +  A++ +  
Sbjct: 366 NLVNRTISMSNKYFGGVVADKGVTEPVDAELEAVALETPKKVTEKMEKLRVADAISDIFV 425

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K  T  DR +TVLY  VE I   A LL+ F+P  A K+   L
Sbjct: 426 LFKRCNKYIDETMPWALAKDETKQDRLATVLYNLVECISIGAELLEPFMPDTAEKVLAQL 485

Query: 478 FVADENRCFQSLDQRL--KPGFMLHKTFDPIFPRF 510
               + R  ++++Q    K G  + +  + +F R 
Sbjct: 486 N--AQKRGMEAMEQYGLYKSGTKVTEKPEILFARL 518


>gi|320527169|ref|ZP_08028356.1| methionyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132497|gb|EFW25040.1| methionyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 646

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 208/517 (40%), Positives = 323/517 (62%), Gaps = 12/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ ++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQK+ +
Sbjct: 1   MENKKPYYITTAIAYTSGKPHIGNVYEIVLADAIARFKRAEGYDVRFQTGTDEHGQKVEE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG T K FVD  +   +   DV++ SYD FIRTT++ H    + ++KK  D+GDIY
Sbjct: 61  KAKAAGKTPKQFVDDVAAVIKQQFDVMNTSYDYFIRTTDEAHERQVQKIFKKFYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y   DEA+Y   ++ +         +   V  M+EE YFF++S Y D+L+ Y 
Sbjct: 121 KGYYEGLYCQEDEAFYTKSQLTEDGKCPVCGGE---VVPMKEEAYFFKMSKYADQLMKYI 177

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP FI P  R+NE+++   K GL+DL +SR +F WGI +  DP++++YVWIDAL+NY+
Sbjct: 178 DEHPHFIQPESRKNEMVNNFLKPGLQDLCVSRTSFKWGIPVEFDPKHVVYVWIDALSNYI 237

Query: 240 TTTGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY    N      K+WPADLH+IGKDI+RFH IYWP  L++   PLPK+VF H ++L
Sbjct: 238 TGLGYDADGNHGPLYKKYWPADLHLIGKDIIRFHTIYWPIMLMALKEPLPKQVFGHPWLL 297

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+R+ ++ E+   +DG    D + +R+N+DLAN 
Sbjct: 298 IGDSKMSKSHGNVIYADDLVKLFGVDAVRFIMLHEMPFAQDGHVTYDLMIERINSDLANN 357

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G++  P      D+ + +  +  ++++ E M    +  A+  +
Sbjct: 358 LGNLVNRTISMQNKYFGGVVANPNVSEPIDDELKAFATGTVKKVVEKMDELRVADAIQDI 417

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + L S  ++Y D   PW L K +   +R +TVLY  +E +R  A+L++ F P+ + KI D
Sbjct: 418 LDLFSRCNKYIDETTPWALAKDSEKIERLATVLYNLLESVRIAAVLMEPFFPETSKKILD 477

Query: 476 ILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            L    + R F+++ +  +L+ G  + +  + +F R 
Sbjct: 478 DLNT--QQRDFETISEFGKLETGIHVAEKPEILFARI 512


>gi|226325813|ref|ZP_03801331.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758]
 gi|225205937|gb|EEG88291.1| hypothetical protein COPCOM_03626 [Coprococcus comes ATCC 27758]
          Length = 634

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 208/515 (40%), Positives = 310/515 (60%), Gaps = 26/515 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MADKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGVTPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDDYHEKEVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G           PVQ  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KGHYEGMYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFFKMSKYADRLIEYI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L
Sbjct: 237 TGIGYHCDGESDEMFNKNWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +   G   E D  + +V     + +   M    +  A+ ++
Sbjct: 357 LGNLVNRTISMTNKYFGGTVTDKGVAEEVDADLKAVTENTPKAVEAKMNELRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I + A LL++F+P+ A KI  
Sbjct: 417 FNLFKRCNKYIDETMPWALAKEEDKKDRLETVLWNLIQSISEGAKLLESFMPETAEKILA 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                  G  + +  + +F R 
Sbjct: 477 QLG-----------------GGHVVEKPEILFQRL 494


>gi|254563518|ref|YP_003070613.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254270796|emb|CAX26801.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 522

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 279/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + +   PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D    + A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAKAPN-ARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD D +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHDAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+    + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAGALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
              R F     + RL+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEHRLQGGTALPAPA-PIFPRF 515


>gi|160916068|ref|ZP_02078275.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
 gi|158431792|gb|EDP10081.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
          Length = 651

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 312/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+TAIAY + +PHIG+ YE+++ D +AR+ R  G DV F TGTDEHGQKI + A+
Sbjct: 6   KGKYYITTAIAYTSGRPHIGNTYEIVLTDAIARYKRQQGYDVFFQTGTDEHGQKIEEKAK 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T K FVD  +   R   D+++ SYD F+RTT+  H    + ++KK+ ++GDIYK  
Sbjct: 66  EAGITPKEFVDNIAGIVRKNFDMMNTSYDYFVRTTDDYHEKQVQKIFKKLYEQGDIYKST 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV+   EE YFF L  Y  +L+ + E+H
Sbjct: 126 YEGMYCTPCESFWTESQLVDGK----CPDCGRPVKKATEEAYFFNLQKYSPRLIEHIETH 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+I+   K GL+DL +SR +F WGI +  DP +++YVWIDAL+NY+T+ 
Sbjct: 182 PEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITSL 241

Query: 243 GYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+  + +   +  K+WPAD+H+IGKDILRFH IYWP  L++   PLPK+VF H ++L   
Sbjct: 242 GFDVDGNHGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLLVGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN I   E++   GVDA+RYF++ E+   +DG    D + +RVN+DLAN +GN
Sbjct: 302 GKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERVNSDLANVLGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G+I  P      D  ++ +    +  + E M    +  A+ ++ +L
Sbjct: 362 LVNRTISMQNKYFHGVISNPMEGDPLDAELIELAVATVHNVDEKMDQLRVGEAIDEIFTL 421

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K  T  DR +TVLY  +E IR  A+LL++F+P+ + KI D L 
Sbjct: 422 LKRCNKYIDETTPWTLGKDETKKDRLATVLYNLLESIRYAAVLLESFMPETSEKILDQLS 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  ++       +L+ G  +      +F R 
Sbjct: 482 TSRRDKASLESFGQLECGHTVEAKPSILFQRI 513


>gi|312828985|emb|CBX33827.1| methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 657

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 212/520 (40%), Positives = 321/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + +    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISALGYLSDDESLFNRYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS  NV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKSNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SM+ K +DG +P   G   E DE + ++    ++   E+M++     AL+
Sbjct: 363 DLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K +  +     V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENRC-FQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F+ L + +     F SL+Q   L    M+     PIFPR 
Sbjct: 483 FEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRL 522


>gi|313115100|ref|ZP_07800588.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622577|gb|EFQ06044.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 665

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 213/512 (41%), Positives = 317/512 (61%), Gaps = 7/512 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ D ++  G            V    EE YFF+ S Y D+LL  Y
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGK----CPDCGREVYDAHEEAYFFKTSKYADRLLKLY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+NY++
Sbjct: 177 EENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++L  G
Sbjct: 237 ALGYGNEKYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWLLMNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN +GN
Sbjct: 297 GKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALITRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M  K + G +         D  + ++ + +  ++  +M +  I +AL ++ ++
Sbjct: 357 LLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDSLTIPQALMEIFAV 416

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ + L 
Sbjct: 417 IQRANKYIDETAPWALAKDEANKARLESVLYHLCEALRVCGILLNAYLPTTAPKMMEQLG 476

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +              +  + +HK  + +FPR 
Sbjct: 477 LDASALDLTKTTYGAQETYTVHK-GEALFPRI 507


>gi|295105205|emb|CBL02749.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 665

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 213/512 (41%), Positives = 317/512 (61%), Gaps = 7/512 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ D ++  G            V    EE YFF+ S Y D+LL  Y
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGK----CPDCGREVYDAHEEAYFFKTSKYADRLLKLY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+NY++
Sbjct: 177 EENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++L  G
Sbjct: 237 ALGYGNETYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWLLMNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN +GN
Sbjct: 297 GKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M  K + G +         D  + ++ + +  ++  +M +  I +AL ++ ++
Sbjct: 357 LLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALMEIFAV 416

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ + L 
Sbjct: 417 IQRANKYIDETAPWALAKDEANKQRLESVLYHLCEALRVCGILLNAYLPTTAPKMMEQLG 476

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +              +  + +HK  + +FPR 
Sbjct: 477 LDASALDLTKTTYGAQQTYTVHK-GEALFPRI 507


>gi|160943218|ref|ZP_02090454.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445457|gb|EDP22460.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii
           M21/2]
          Length = 665

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 213/512 (41%), Positives = 317/512 (61%), Gaps = 7/512 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGYDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  +LD+SYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ D ++  G            V    EE YFF+ S Y D+LL  Y
Sbjct: 121 KGEYIGHYCKPCESFWTDSQLVDGK----CPDCGREVYDAHEEAYFFKTSKYADRLLKLY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+NY++
Sbjct: 177 EENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +       KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++L  G
Sbjct: 237 ALGYGNETYHDYDKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWLLMNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN +GN
Sbjct: 297 GKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M  K + G +         D  + ++ + +  ++  +M +  I +AL ++ ++
Sbjct: 357 LLSRTVAMCEKYFGGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALMEIFAV 416

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   N  R  +VLY   E +R   ILL A++P  A K+ + L 
Sbjct: 417 IQRANKYIDETAPWALAKDEANKQRLESVLYHLCEALRVCGILLNAYLPTTAPKMMEQLG 476

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +              +  + +HK  + +FPR 
Sbjct: 477 LDASALDLTKTTYGAQQTYTVHK-GEALFPRI 507


>gi|114327741|ref|YP_744898.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315915|gb|ABI61975.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 514

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 239/509 (46%), Positives = 334/509 (65%), Gaps = 5/509 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y +T I Y N  PHIGHAY  +  DVLAR+ RL+G +V F TGTDEHGQK+ KAA +A
Sbjct: 4   RYYCTTPIYYVNGAPHIGHAYTCVATDVLARWKRLEGREVFFLTGTDEHGQKVEKAAADA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  + F+D  +  FR MA+ ++ S+D FIRTTE  H      LW ++ ++G+IY G Y 
Sbjct: 64  GVDPQTFIDGMADGFRAMAEKMNTSHDRFIRTTEPEHKKAVAALWSRLEERGEIYLGSYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y +DE+    DG+ Y     PV+ + E  YFFRLS + D LL  YE  P+
Sbjct: 124 GWYAVRDEAFYGEDELTLKPDGKRYAPTGAPVERVTEPSYFFRLSRWGDALLKLYEDQPD 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFVK GL DLS+SR +F WG+ +P D ++++YVW+DALTNYLT  GY 
Sbjct: 184 FIAPQARRNEVISFVKQGLTDLSISRTSFSWGVPVPGDAKHVVYVWLDALTNYLTAVGYP 243

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D    +   FWPADLH++GKDILRFHAI+WPAFL++A LPLP++VF+HG+   +GEK+SK
Sbjct: 244 DETSPA-WPFWPADLHMVGKDILRFHAIFWPAFLMAAGLPLPRRVFAHGWWTVEGEKMSK 302

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN I+P  +++E G+D +R+FL+RE+  G DG + +  +  R+N +LAN +GNL  R+
Sbjct: 303 SLGNTIEPGALVDEFGLDPVRFFLLREVPFGNDGDFSRRAMIGRMNTELANDLGNLAQRT 362

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +S+I ++ DG +P  GA T  D ++L   + +  ++   +  Q  H AL +   ++   +
Sbjct: 363 LSLIARNCDGALPARGAETGEDATLLRDAASLPAKMGAQIDRQAFHEALEEAWKVIRAAN 422

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADE 482
            Y D Q PW LKKT+PDR   VL V  +V+R +A ++Q FVP  A ++   L V   A E
Sbjct: 423 GYIDRQAPWALKKTDPDRMRDVLRVLADVLRIIATVMQPFVPGSAARMLVQLGVREAAGE 482

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
              F +L+  L+ G  L      IFPRF+
Sbjct: 483 QVPFAALETHLEEGTRLPAP-QGIFPRFV 510


>gi|258513470|ref|YP_003189692.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777175|gb|ACV61069.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 533

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 217/528 (41%), Positives = 324/528 (61%), Gaps = 24/528 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YIST I YP+ + HIGHAY  + AD  AR+ R+ G DV F TG+DEHGQKI + A
Sbjct: 2   SKPTFYISTPIYYPSDKLHIGHAYTTVAADSFARYKRMKGYDVWFLTGSDEHGQKIERTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G +   +VDQ    F+ +   LD+SYDDFIRTT++RH    + +++K+ D+GDIYK 
Sbjct: 62  KEKGQSPLEYVDQIVAGFKSLWKKLDVSYDDFIRTTQERHKKVVQDIFQKLYDQGDIYKA 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E ++ + ++    +         PV+ ++EE YFF++S Y D++L Y E 
Sbjct: 122 QYEGHYCTPCETFWTEYQLDADGN---CPDCGRPVEILQEESYFFKMSKYADEILKYIED 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           + EFI P  RRNE++SF+KSGL DL +SR TFDWGI++P DP++++YVW+DALTNY++  
Sbjct: 179 NAEFIQPNSRRNEMVSFIKSGLADLCVSRTTFDWGIQVPFDPKHVIYVWVDALTNYISAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D    K+WPAD+H++GKDI+RFH I WP  L++A + LPK+V  HG++L    K
Sbjct: 239 GYGTGDDSLFRKYWPADMHLVGKDIVRFHTIIWPIMLMAAGIELPKQVLGHGWLLLDSGK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+E+ ++ GVDA+RY+L+RE+  G DG+Y ++ L  R+N DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPLELCDKYGVDAIRYYLLRELPLGSDGYYSEEALVNRINIDLANDLGNLI 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTE---------------SDESILSVCSRVLQEIRENMQN 407
           SRS SMI+K   G++  P    E                D  ++S+  +   E+ + M+ 
Sbjct: 359 SRSTSMIVKFSKGVLEEPETPREPVLLEQYLGSEEAPAEDRDLISLALKTKYEVDDLMER 418

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQA 464
           + I  ALA V  LV   ++Y +   PW L K +P+   R +TVLY   E IR + +++  
Sbjct: 419 RDISGALAAVWRLVGRANKYVEETSPWSLAK-DPELRGRLATVLYNLAETIRFVTVMVTP 477

Query: 465 FVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           F+P   + ++  L + +  E   +++L+    P        D IFPR 
Sbjct: 478 FMPNFPSMVWQQLAIGNQPELHVWEALEWGNLPAGTRVVKGDAIFPRI 525


>gi|78223524|ref|YP_385271.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78194779|gb|ABB32546.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 509

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 222/508 (43%), Positives = 323/508 (63%), Gaps = 8/508 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA  
Sbjct: 3   RTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGYDVFFLTGTDEHGQKVEKAANA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T     D+  + F+ + + LDISY+DFIRTT++RH      L++++  KGDIY G Y
Sbjct: 63  AGETPLELADRVVKRFQALWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
             WY    E ++ + ++  G         + PV+ ++EE YFFR+S YQ++LL++ E++P
Sbjct: 123 EDWYCTPCETFWTETQLIDGK----CPDCNRPVEKLKEESYFFRMSKYQEQLLAHIEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+ISFVK GL+DLS+SR +F+WGI +P + ++++YVW DALTNY+T  GY
Sbjct: 179 DFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D    +  KFWP D H+IGKDILRFHA+YWP FL++A LP+P+KVF+HG+   +G+K+S
Sbjct: 239 PDQAG-NYGKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPRKVFAHGWWTVEGQKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL NV++P  ++++ G+DA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL+SR
Sbjct: 298 KSLQNVVEPNMLVDKYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLSR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S +M+ K + G +P PGA TE D +  +    ++ ++   M      + L  +  ++S  
Sbjct: 358 STAMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEMAFSKGLQAIWEVISAG 417

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K     +R  T++Y  +E  R +  LL AF+P+ A K    L   + 
Sbjct: 418 NKYIDESAPWTLAKDPAQKERLGTIMYTLLEAQRIVHTLLSAFMPRTAAKALGYLGCMEA 477

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R       +L PG  + K  + +FPR 
Sbjct: 478 LRDEDLAWGKLVPGTQIAKA-EALFPRI 504


>gi|295094201|emb|CBK83292.1| methionyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 678

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 205/512 (40%), Positives = 304/512 (59%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 3   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAF 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T K FVD+ S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG 
Sbjct: 63  ENMQTPKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGH 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ D ++  G           PVQ  +EE YFF++S YQDKL+ + E H
Sbjct: 123 YVGKYCTPCESFFTDGQLIDGK----CPDCGRPVQEAKEEAYFFKMSKYQDKLMKHIEQH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  RRNE+++   K GL+DL +SR +F WGI +  DP++++YVW+DAL+NY+T  
Sbjct: 179 PEFIQPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDALSNYITGL 238

Query: 243 GYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  +        K+WPADLH+IGKDILRFH +YWP  L++  LPLPK+VF H ++L   
Sbjct: 239 GYDVDGKSDEKFYKYWPADLHLIGKDILRFHTVYWPIMLMALGLPLPKQVFGHPWLLQSD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+   ++++  GVDA+R+F++ E+    DG    + + +R+N++LAN +GN
Sbjct: 299 GKMSKSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWELMVERLNSELANTLGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++         DE +  V      ++ E M    +  A+ ++ +L
Sbjct: 359 LVNRTISMSNKYFGGIVTNTNVTEPVDEDLKKVVMDCRYKVAECMDKLKVADAITEIFAL 418

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P+   KI   L 
Sbjct: 419 FKRCNKYIDETMPWALAKEEDKKDRLNTVLYNLVESIIIGATLLEPYMPETTEKIMAQLN 478

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                          K G  + +  + +F R 
Sbjct: 479 TEKRKVTELGKFGLYKSGTKVTEQPEILFARL 510


>gi|225387105|ref|ZP_03756869.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme
           DSM 15981]
 gi|225046791|gb|EEG57037.1| hypothetical protein CLOSTASPAR_00855 [Clostridium asparagiforme
           DSM 15981]
          Length = 660

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 200/512 (39%), Positives = 308/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI + AQ
Sbjct: 6   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKRAQGCDVFFQTGTDEHGQKIEEKAQ 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV+ K FVD+ +   + + D+++ SYD FIRTT+  H    + ++K++ D+GDIYKG 
Sbjct: 66  AAGVSPKEFVDKAAEEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYDQGDIYKGY 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G            V+  +EE YFFR+S Y  KL+ +  +H
Sbjct: 126 YEGMYCTPCESFFTESQLVDGK----CPDCGREVKPAKEEAYFFRMSKYAPKLIEHINAH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVTFDPKHVTYVWLDALTNYITGI 241

Query: 243 GYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  +        K+WPADLH+IGKDI+RFH IYWP FL++  + LPK+VF H ++L   
Sbjct: 242 GYDCDGGSTEQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGVELPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++   GA    DE + +     ++++   M+   +  A+ ++ ++
Sbjct: 362 LVNRTISMSNKYFGGVVADKGAAEAVDEDLKATVLEAVKKVEAKMEQLRVADAITEIFNI 421

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY   E I   A LL+ F+P+ + KI   L 
Sbjct: 422 FRRSNKYIDETTPWALAKDEAKKDRLATVLYNLSEAIAIGASLLEPFMPETSGKILAQLN 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                     +    + G  +    + +F R 
Sbjct: 482 TGKRELAQMDVFGMYESGTKVTDKPEILFARM 513


>gi|189425008|ref|YP_001952185.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421267|gb|ACD95665.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 508

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 214/509 (42%), Positives = 325/509 (63%), Gaps = 8/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ R+ G DV F TG+DEHGQK+ KAAQ
Sbjct: 2   KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRMKGFDVFFLTGSDEHGQKVEKAAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T     D+  + F+ + + L IS++DFIRTT++RH      ++K++ ++GDIY G 
Sbjct: 62  TNGETPLELADRVVKRFQALWEKLGISHNDFIRTTQERHKQGVTHIFKQLMEQGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + +V  G         + PV+ ++EE YFF++SAY +KLL++ E++
Sbjct: 122 YEDWYCTPCETFWTETQVEDGK----CPDCNRPVEKLKEESYFFKMSAYGEKLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISFVK GL+DLS+SR +F WGI +P + ++++YVW DALTNY++  G
Sbjct: 178 PDFIQPKTRRNEIISFVKEGLRDLSVSRTSFSWGIPVPGNERHVIYVWFDALTNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +    +  ++WPAD H+IGKDILRFH +YWP FL++A LP+P+KVF+HG+   +G+K+
Sbjct: 238 YPNADG-NYGRYWPADAHLIGKDILRFHTVYWPTFLMAAGLPIPQKVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  +I++ GVD +RYFL+RE+  G DG +    L  R+N+DLAN +GNL+S
Sbjct: 297 SKSLQNVVEPNMLIDKYGVDVVRYFLLREVPFGLDGDFSHGSLINRINSDLANDLGNLLS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M++K +DG++P PG  +E D ++ +    +L  +   M      +AL  +  ++S 
Sbjct: 357 RSTAMLVKYFDGILPAPGPLSELDATLKTKAEAMLAAVDNCMDELAFSKALQSIWDVISA 416

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     ++ +TV+Y  +E  R +  L+  F+P+ A K    L    
Sbjct: 417 GNKYIDETAPWGLAKDPAKREQLATVMYCLLEAQRLVHSLVAPFMPQTARKALACLGWQK 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E      +  +L PG ++ K    +FPR 
Sbjct: 477 EATEEDLVWGKLAPGTIIEKAA-ALFPRI 504


>gi|41407070|ref|NP_959906.1| methionyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395421|gb|AAS03289.1| MetS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 519

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 250/511 (48%), Positives = 349/511 (68%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++TAI YPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A  
Sbjct: 2   RPFYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+ T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   Y
Sbjct: 62  EGIGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E     DG    A+   P+ W EE+ YFFRLSAY DKLL++YE++
Sbjct: 122 SGWYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEAN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT  G
Sbjct: 182 PDFIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+
Sbjct: 242 YPDTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GN++DPI +++  GVD LRYFL+RE+  G+DG Y +D +  R+N DLAN +GNL  
Sbjct: 302 SKSVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTEDAIITRINTDLANELGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+   ++P PG FT  D  +L     +L  +R +  +Q +H  L  +  ++ E
Sbjct: 362 RSLSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASFDSQAMHLGLEAIWLMLGE 421

Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++YF AQ+PW L+K+  +    R  TVLYVT EV+R  A+L+Q  +P+ A K+ D+L  
Sbjct: 422 ANKYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPESAGKLLDLLGQ 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F +L  RL PG +L      +FPR+
Sbjct: 482 GQDRRAFDALGARLAPGTVLP-PPTGVFPRY 511


>gi|295102779|emb|CBL00324.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 665

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 214/512 (41%), Positives = 321/512 (62%), Gaps = 7/512 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + HIGH+Y  +  D LARF R+ G DV+F TGTDEHGQKI  
Sbjct: 1   MSEHKTFYITTPIYYPSDKLHIGHSYTTVACDALARFKRMQGCDVMFLTGTDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AGVT K +VD+     +D+  ++DISYD FIRTT+  H ++C+ ++ K+ ++GDIY
Sbjct: 61  KAADAGVTPKEYVDKIVATVKDLWKLMDISYDRFIRTTDDYHMESCQKIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y+G Y    E+++ D ++  G            V    EE YFF+   Y D+LL  Y
Sbjct: 121 KGEYTGHYCKPCESFWTDSQLVDGK----CPECGREVYDAHEEAYFFKTGKYADRLLKLY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I+F+K GL+D  +SR +  WGI +P DP++ MYVW+DAL+NY++
Sbjct: 177 EENPQFIQPESRKNEMIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +      +KFWPADLH++GK+ILRFH I WPA L++ +LPLPK+VF HG++L  G
Sbjct: 237 ALGYGNEKYDEYSKFWPADLHMVGKEILRFHTILWPAMLMALDLPLPKRVFGHGWLLMNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ + +  GVDA+RYFL+REI  G DG +  + L  R+N+DLAN +GN
Sbjct: 297 GKMSKSVGNVVDPVILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+M  K + G +         D  + ++ S +L ++  +M +  I +AL ++ ++
Sbjct: 357 LLSRTVAMCEKYFGGTVHKVAGTEAIDTELETMTSELLGKVTADMDSLTIPQALMEIFAV 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   +RA   +VLY   E +R   ILL A++P  A K+ + L 
Sbjct: 417 IQRANKYIDETAPWALAKDEANRARLESVLYHLCEALRVCGILLNAYLPSTAPKMMEQLG 476

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +       +      +  + +HK  + +FPR 
Sbjct: 477 LDASAIDVEKAAYGAQESYTVHK-GEALFPRI 507


>gi|227528869|ref|ZP_03958918.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227351192|gb|EEJ41483.1| methionyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 675

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 201/520 (38%), Positives = 306/520 (58%), Gaps = 11/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++   YI+T I YP+ + HIG+ Y  +  D  AR+ RL G DV + TGTDEHG KI + 
Sbjct: 3   EQKPTYYITTPIYYPSGKLHIGNTYTTVACDAEARYKRLMGYDVFYLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G   + +VD+ +   + +   ++I+ D FIRTT+  H    + +++K  D+GDIYK
Sbjct: 63  AEKLGKQPQEYVDEMAAGIKKLWKTMEITNDKFIRTTDDYHEKAVQKIFQKFVDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE Y+ +    EVY+  +G     +    + VQ +EEE YFF++S Y D 
Sbjct: 123 GKYKGWYSVDDEEYFTESQLAEVYRDDNGNVIGGKAPSGHEVQLVEEESYFFKMSKYSDW 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L++YY+ HP+FI P  R NE+++   K GL+DL+++R +F+WG+K+P+DP++++YVWIDA
Sbjct: 183 LMNYYKEHPDFIEPHTRVNEMVNNFLKPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L +  LPLPK V  HG
Sbjct: 243 LSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIMLHALGLPLPKHVIGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  K  K+SKS GNVI P  ++   G+DA RY+L++ +  G DG +  +    +VN DL
Sbjct: 303 WLTMKDGKMSKSKGNVIYPETLVNRYGLDATRYYLLKAMPFGNDGVFSPEDFVDKVNYDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K  DG  +    A TE D  +    +  + E +  M       A
Sbjct: 363 ANDLGNLLNRTVAMINKYQDGKLVAQNDATTEYDTDLEQTAANAIAEFKAEMDRVHFADA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           L+ V  LVS  ++Y D  +PW L K    +A    V+    + +R +A L+Q  +     
Sbjct: 423 LSAVWKLVSRANKYIDETEPWVLAKDESKKAELSDVMTHLAKSLRVIAALIQPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLDQRLKPGF-MLHKTFDPIFPRF 510
           +I   L +   N    +L     P    +     PIFPR 
Sbjct: 483 EIITQLGLEGTNLDLTTLQFDDFPETAQVVAKGTPIFPRL 522


>gi|315660343|ref|ZP_07913196.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494632|gb|EFU82974.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 657

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 327/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D      + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E D+++ ++    +++  +NM++     ALA
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYTGPKHELDDAMEALALETVKDFNDNMESFQFSVALA 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L+S  ++Y D   PW L K +  +   + V+   +E IR   +LL+ F+     ++
Sbjct: 423 TVWKLISRTNKYIDETTPWVLAKDDSQKDMLANVMAHLIENIRFATVLLRPFLTHAPREV 482

Query: 474 FDILFV-ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           F  L + + E     SL+    LK   M+ +   PIFPR 
Sbjct: 483 FKQLNINSPELFELASLERYGALKQAVMVTEKPSPIFPRL 522


>gi|239616428|ref|YP_002939750.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505259|gb|ACR78746.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 639

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 206/509 (40%), Positives = 331/509 (65%), Gaps = 7/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y++T I Y N++PHIG AY  I+AD++AR+ RL G DV F TGTDEHGQK+ +AA+
Sbjct: 2   KPKFYVTTPIYYINSEPHIGSAYTTIVADIVARYKRLSGYDVFFLTGTDEHGQKVLQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  + + DQ +  F+ +   L I+ D F+RTT++RH  T ++  KK+ + GD+YKG 
Sbjct: 62  EENLDPQTYSDQLAEKFKVLWKELQITNDYFVRTTDERHMKTVQLFVKKMLENGDVYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY +  E ++ ++++ K        +    V+W+ EE YFFRLS Y D LL +++ H
Sbjct: 122 YEGWYCVPCETFWTEEDIGKER---VCPSCGREVKWVSEENYFFRLSKYNDALLKHFQEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RRNE++  +++GL+DLS++R +F WG+ +P+DP++++YVW+DAL NY++  G
Sbjct: 179 PEFVQPDFRRNEMLRILENGLRDLSITRTSFKWGVPMPNDPEHVIYVWVDALINYISAIG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y+D+P+ +  ++WPAD+H+IGK+I RFH++ WPA L+S  LPLPK++++HG++   G+KI
Sbjct: 239 YIDDPE-TFHRYWPADVHIIGKEINRFHSLIWPAMLMSVGLPLPKQIYAHGWLTVNGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP E ++  G DA+RY+L+R+I  G+DG + ++ L  R+NADLAN +GNL+ 
Sbjct: 298 SKSLGNAIDPREFVKAYGNDAVRYYLLRDIQFGRDGDFSEENLVHRINADLANDLGNLLH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+MI K  +G++P  G   + D  +  +   V+ E  ++M N     +L  +      
Sbjct: 358 RTVAMIEKFNNGIVPKKGVVEDVDNQLYGLAEEVIAEYIDHMDNLRFTPSLDAIWRFARF 417

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D  +PW+L K     +R +TVLY  V+ +R ++++++  +P  A  I + +  A 
Sbjct: 418 GNKYIDLTEPWKLGKDPEKAERLNTVLYNLVDTLRIVSLMIEPVMPNTAKAIRERIGQAV 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E   F  L   L    +  K  +P+FPR 
Sbjct: 478 E-LDFTHLKLGLTKNGVGVKHGEPLFPRI 505


>gi|317499441|ref|ZP_07957708.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893313|gb|EFV15528.1| methionyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 656

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/513 (39%), Positives = 313/513 (61%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A
Sbjct: 2   SKKPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 62  EEKGVTPKEFVDDVAGEIKRIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PVQ  +EE YF +LS Y D+L+ +  +
Sbjct: 122 EYEGLYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFLKLSKYADRLIEHINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++     GL+DL +SR +F WGI +  D  +I+YVW+DALTNY+T 
Sbjct: 178 HPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITG 237

Query: 242 TGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + +      KFWPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGNSSDKFNKFWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++++  GVDA+RYF++ E+   +DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   + D+ + +V +    ++ E M +  +  ++ ++ +
Sbjct: 358 NLVNRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVTGTRDKVAEKMADLRVADSMTEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    +RY D   PW L K     DR +TVLY  VE I   A LL  ++P+ + KIF  L
Sbjct: 418 LFRRCNRYIDETMPWVLAKDEASKDRLATVLYNLVEGITIGASLLSPYMPETSEKIFAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +       +     K G  + +    +F R 
Sbjct: 478 NTSMVEFDNLATFGNYKSGTKVTEKPQILFARL 510


>gi|167768118|ref|ZP_02440171.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1]
 gi|167709642|gb|EDS20221.1| hypothetical protein CLOSS21_02673 [Clostridium sp. SS2/1]
 gi|291559969|emb|CBL38769.1| methionyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 656

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/513 (39%), Positives = 313/513 (61%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A
Sbjct: 2   SKKPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 62  EEKGVTPKEFVDDVAGEIKRIWDLMNTSYDRFIRTTDEDHEKQVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PVQ  +EE YF +LS Y D+L+ +  +
Sbjct: 122 EYEGLYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFLKLSKYADRLIEHINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++     GL+DL +SR +F WGI +  D  +I+YVW+DALTNY+T 
Sbjct: 178 HPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDEGHIVYVWLDALTNYITG 237

Query: 242 TGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + +      KFWPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGNSSDKFNKFWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++++  GVDA+RYF++ E+   +DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADDLVDFFGVDAVRYFVLHEMPFERDGVISWELMIERMNSDLANILG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   + D+ + +V +    ++ E M +  +  ++ ++ +
Sbjct: 358 NLVNRTISMSNKYFGGIVEDKGVVGDYDDDLKAVVTGTKDKVAEKMADLRVADSMTEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    +RY D   PW L K     DR +TVLY  VE I   A LL  ++P+ + KIF  L
Sbjct: 418 LFRRCNRYIDETMPWVLAKDEASKDRLATVLYNLVEGITIGASLLSPYMPETSEKIFAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +       +     K G  + +    +F R 
Sbjct: 478 NTSMVEFDNLATFGNYKSGTKVTEKPQILFARL 510


>gi|301299606|ref|ZP_07205867.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852793|gb|EFK80416.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 675

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 213/522 (40%), Positives = 322/522 (61%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG++Y  I  DVLAR+ RL G DV F TGTDEHG KI +
Sbjct: 1   MGEKPTFYITTPIYYPSGKLHIGNSYTTIACDVLARYKRLQGYDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  + +VD+ + + +++   L+I+ D FIRTT+  H    + +++K+  KGDIY
Sbjct: 61  KAQALGMQPQEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+  DG     +    + VQ +EE+ YFF++S Y D
Sbjct: 121 LGKYRGWYSVSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YYE HP+FI+P  R+NE+++   K GL+DL+L+R +F+WG+K+P +P++++YVWID
Sbjct: 181 RLVKYYEEHPDFIIPDTRKNEMLNNFIKPGLEDLALTRTSFNWGVKVPSNPEHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY    D S   K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  
Sbjct: 241 ALYNYITALGYETGDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILMALDLPLPKHIIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L +  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    ++N 
Sbjct: 301 HGWLLMRDGKMSKSKGNVVYPEMIVERYGLDALRYYLMRAVPFGNDGVFTPEDFIGKINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           DLAN +GNL++R+V+MI K   G IP   +  T  D+ +  V +  ++   E M +    
Sbjct: 361 DLANDLGNLLNRTVAMINKYRGGQIPELKSGVTAFDKDLEDVAANTIKNFEEQMDSVHFS 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V  LV+  ++Y D  +PW L K  T  D   +VL      +R +AIL+Q  +   
Sbjct: 421 NALDEVWKLVARSNKYIDETEPWILTKDETKKDELDSVLAHLAASLRLVAILIQPVMTHT 480

Query: 470 ANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
             +IF  L +  ++   Q +    L  G  +     PIFPR 
Sbjct: 481 PKEIFAQLGLNSDDMAIQGVSYFDLPAGAQVVAKGTPIFPRL 522


>gi|315037467|ref|YP_004031035.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325955925|ref|YP_004286535.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312275600|gb|ADQ58240.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325332490|gb|ADZ06398.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327182760|gb|AEA31207.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 658

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 319/520 (61%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRAQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT+++H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQQFVDKMADSYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P P A  +  + +    + V+ E RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGHVDPVPVAQDKFGKDLQDTAASVIDEYREYMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L++  ++Y D   PW L K    +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDSIWKLIARANKYIDETTPWVLNKEGKKEELSHVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  ++   + L          + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQRGLSFGDFAWDTKVIEKPKPIFPRL 520


>gi|323465759|gb|ADX69446.1| Methionyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 658

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 205/520 (39%), Positives = 317/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++   K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    G+D LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMRALPFGADGIFTPEDFIERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  DG   P P A  +  + +    + V+ +  E M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQGAPVPVAQDKFGKDLQDTAASVIADYCEQMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    D  S V+    E +R +AI++   + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  ++   ++L          + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTKVVEKPKPIFPRL 520


>gi|307691530|ref|ZP_07633767.1| methionyl-tRNA synthetase [Ruminococcaceae bacterium D16]
          Length = 655

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 211/517 (40%), Positives = 308/517 (59%), Gaps = 15/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER++ YI+T I YP+ + HIGH Y  +  D +AR+ RL G DVLF TGTDEHGQKI   A
Sbjct: 2   ERKRFYITTPIYYPSDKLHIGHTYCTVATDAMARYKRLCGYDVLFLTGTDEHGQKIEDKA 61

Query: 63  QNAGVTTKVFVDQNSRNFR---DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + AGV+ K FVD+     R   D+  +++IS D FIRTT+  H    + ++KK+ +KGDI
Sbjct: 62  KEAGVSPKEFVDKIVTGERGVLDLWKLMNISNDRFIRTTDDYHVSAIQKIFKKMYEKGDI 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y    E+++ + ++  G            VQ  +EE YFFRLS Y D  + +
Sbjct: 122 YKGEYVGKYCKPCESFWTESQLVDGK----CPDCGREVQDAKEEAYFFRLSKYAD-RIQH 176

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
                +F+ P  R NE+++   K GL+DL +SR +F WG+ +  DP +++YVW+DAL NY
Sbjct: 177 LLEDTDFLEPRSRVNEMVNNFIKPGLEDLCVSRTSFTWGVPVDFDPGHVVYVWVDALFNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            T  G+L++      KFWPAD+H +GK+I+RFH+I WPA L+S ++PLPKKVF HG++L 
Sbjct: 237 TTALGFLNDKYDDYEKFWPADVHFVGKEIVRFHSIIWPAMLMSMDMPLPKKVFGHGWLLL 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+DP  + E  GVDALR+FL+R    G DG +  + L   +N DLAN +
Sbjct: 297 DGGKMSKSKGNVVDPYILAERFGVDALRFFLLRTFPFGSDGNFSNEALINTINVDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL+SR+VSM+ K ++G +P        DE + ++ S +     E M++     AL+++ 
Sbjct: 357 GNLLSRTVSMVGKYFNGTLPKERQSDALDEELTAMVSALRGRYEEQMEHYAFQNALSEIF 416

Query: 419 SLVSEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++S  ++Y D   PW L K    N  R +TV+Y  +E +R  AILL  F+P  A +I  
Sbjct: 417 KVISRANKYIDENAPWVLAKDMEANGVRLATVMYNLLETLRVCAILLTPFIPTSAAEILR 476

Query: 476 ILFVADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
            +   D    ++S  +   L     +    D +FPR 
Sbjct: 477 QIGACDACSTWESAAVFGSLPADVTVT-RGDNLFPRI 512


>gi|160893725|ref|ZP_02074509.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
 gi|156864710|gb|EDO58141.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
          Length = 678

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 204/512 (39%), Positives = 311/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 3   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFQTGTDEHGQKIENKAF 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T K FVD+ S   +D+ D+++ SYD FIRTT+  H    + +++K+ D+GDIYKG 
Sbjct: 63  ENMQTPKEFVDEISGEIKDIWDLMNTSYDKFIRTTDADHERQVQKIFRKLYDQGDIYKGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ D ++  G           PVQ  +EE YFF+LS YQD+L+ + E +
Sbjct: 123 YVGKYCTPCESFFTDSQLVDGK----CPDCGRPVQEAKEEAYFFKLSKYQDRLMKHIEQN 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+I+   K GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PDFIQPESRKNEMINNFIKPGLQDLCVSRTSFKWGIPVDFDDKHVIYVWIDALSNYITGL 238

Query: 243 GYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + +  +   K+WPADLH+IGKDILRFH IYWP  L++  +PLPK++F H +++   
Sbjct: 239 GYDVDGNNDELYKKYWPADLHLIGKDILRFHTIYWPIMLMALGVPLPKQIFGHPWLIQND 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+   +++   GVDA+R+F++ E+    DG    + + +R+N++LAN +GN
Sbjct: 299 GKMSKSKGNVMYADDMVRLFGVDAVRFFVLHEMPFENDGIISWELVVERINSELANTLGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++   G   E DE + +V      ++ E M    +  A++++ +L
Sbjct: 359 LVNRTISMSNKYFGGVVTNTGVTEEVDEDLKNVVLNCRIKVAECMDKLKVADAISEIFTL 418

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P  + KI + L 
Sbjct: 419 FKRCNKYIDETMPWALAKDETKQDRLNTVLYNLVESIVIGASLLEPYMPDTSVKILNQLN 478

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            A               G  + +T + +F R 
Sbjct: 479 AAKRKVTELGRFGLYPSGNKVTETPEILFARL 510


>gi|227509271|ref|ZP_03939320.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191269|gb|EEI71336.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 675

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 207/519 (39%), Positives = 315/519 (60%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D +AR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T + +VD+ ++  +++   L+IS   FIRTT+  H      +++++ D+GDIY 
Sbjct: 63  ADKLGMTPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHERAVADIFQQLQDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L  YY+ HP+FI P  R NE+I +F+  GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    RVN DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G+IP   A   E+D+ +  V    +   +++M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPEFKAGVNEADKELEEVSKESIAGFKKSMDDLHFSEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L++V  LVS+ ++Y D  +PW L K   + ++ ++V+      +R +A L+   +     
Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           +IF  L + DE    ++LD   L  G        PIFPR
Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPAGAKTVAKGTPIFPR 520


>gi|242371680|ref|ZP_04817254.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350629|gb|EES42230.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 656

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 323/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL   +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSEDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   ENM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFHGELPAYQGPKHELDEDMEAMALETVKNFNENMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D  +PW L K    R     V+   VE IR  A+LLQ F+     ++
Sbjct: 423 TVWKFISRTNKYIDETQPWVLAKDESQRDMLGNVMAHLVENIRFSAVLLQPFLTHAPREM 482

Query: 474 FDILFVADENRC-FQSLD--QRLKPGFMLHKTFDPIFPRF 510
           F  L + +      +SL+    L    M+ +   PIFPR 
Sbjct: 483 FKQLNINNPKLTELESLESYGALTEPIMVTEKPSPIFPRL 522


>gi|310657778|ref|YP_003935499.1| methionyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824556|emb|CBH20594.1| methionyl-tRNA synthetase [Clostridium sticklandii]
          Length = 651

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 211/515 (40%), Positives = 311/515 (60%), Gaps = 10/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIGH Y  + AD +AR+ R  G DV F TGTDEHG+KI K
Sbjct: 1   MSNK-TFYVTTPIYYPSGRLHIGHTYTTVAADAIARYKRFTGFDVRFLTGTDEHGEKIQK 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +  K ++D    + + + + ++ISYDDFIRTT++RH    + +++K+ DKGDIY
Sbjct: 60  TAAEKKMMPKDYLDGMIEDIKKLWETMEISYDDFIRTTDERHEKAVQKIFQKLYDKGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY +  E+ + D +V    +          VQ  +E  YFF+LS YQ  L+ YY
Sbjct: 120 LGEYEGWYCIPCESLWTDTQVG---EEHLCPDCKREVQKKKESSYFFKLSKYQQPLVDYY 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            SHP+F  P  R+NE+++    +GL DLS+SR TFDWGIK+P D ++++YVWIDAL NY+
Sbjct: 177 NSHPDFCFPESRKNEMLNNFINAGLDDLSVSRTTFDWGIKVPFDDKHVIYVWIDALCNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GYL   +    K+WPA++ ++GK+I+RFH I WPA L++ +LPLP KV+ HG+IL  
Sbjct: 237 TALGYLSEDESLMEKYWPANMQIVGKEIVRFHTIIWPALLMALDLPLPDKVYGHGWILFS 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  +IE  G+DAL+YFL++E   G+DG Y       R+N+DL N +G
Sbjct: 297 EDKMSKSKGNIVYPEPIIERYGIDALKYFLLKEFTFGQDGNYTNRNFLTRINSDLVNDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+VSMI K  D ++P P  F      +  V S +  ++ + M     + AL ++  
Sbjct: 357 NLLSRTVSMIEKYNDSIVPEPKVFDSVHAELKKVASSMPAKVDDAMNRMQFNEALEEIWK 416

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +V   ++Y D   PW L K  T  D   TVLY   E +R + +++   +   A KIF+ L
Sbjct: 417 VVRRSNKYVDETMPWVLAKDETKKDELDTVLYNLAEALRLVTVMISPLLHITAKKIFEQL 476

Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
              +E R ++S      LKPG  + K  + +FPR 
Sbjct: 477 SAGEEIRTYESALSFGGLKPGTKVAK-GEILFPRL 510


>gi|257468429|ref|ZP_05632523.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062695|ref|ZP_07927180.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688371|gb|EFS25206.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 641

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 212/514 (41%), Positives = 312/514 (60%), Gaps = 13/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+G AY  I ADV+AR+ +  G DV F TGTDEHGQK+ + A+ 
Sbjct: 3   KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETAKQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D  +  F +M   L+I Y DFIRTTE RH +  + + KK+ + GDIYKG Y
Sbjct: 63  KGYTPQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYENGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E +  ++++    +G +       ++ ++EE YFF++S YQD LL++ +SHP
Sbjct: 123 SGKYCVSCETFVPENQIV---NGNHCPDCGKELRVVKEESYFFKMSKYQDALLAHIDSHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEV+SF+K GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY
Sbjct: 180 DFILPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +NP+    KFW     +H++GKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 240 ENNPE-LFDKFWTNGEVVHLLGKDIVRFHAIIWPCMLLSAGVKLPDNIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+   ++ GVDA RY L+RE+  G DG Y    +  R+N+DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPVAETKKYGVDAFRYCLLREVQFGNDGDYSTKSVVTRINSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G+I         D+ I ++ +  L+E+ E M      ++L  +   +S
Sbjct: 359 NRTLGMYKKYFNGVIAAGTTRDAFDDEIENLWNETLKEVTEQMNIVQFSKSLEAIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K     DR + V+   V  + + A+++   +P  A KI+D L V 
Sbjct: 419 RLNKYIDETMPWALAKDEDKKDRLAVVMNHLVNGLYKTAVMIYPCMPTAAQKIWDQLGVQ 478

Query: 481 DENRCFQSLD----QRLKPGFMLHKTFDPIFPRF 510
              R  +  +      L  G +L    +PIFPR 
Sbjct: 479 KPVRDAKVAEVEGWDLLPAGHVLGNA-EPIFPRL 511


>gi|282601236|ref|ZP_05981162.2| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569800|gb|EFB75335.1| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 676

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 217/518 (41%), Positives = 300/518 (57%), Gaps = 16/518 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI+T I YP+ + HIGH Y  +  D +AR+ RL G +V+F TGTDEHGQKI   A
Sbjct: 8   EQKKFYITTPIYYPSDKLHIGHTYCTVATDAMARYKRLQGYNVMFLTGTDEHGQKIELKA 67

Query: 63  QNAGVTTKVFVDQNSRN---FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + AGVT + FVD         +D+  +++ISYD FIRTT+  H    + ++KK+ DKGDI
Sbjct: 68  KEAGVTPQQFVDNIVEGPKGVKDLWKLMNISYDRFIRTTDDYHVGAIQKIFKKMYDKGDI 127

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y    E+++ + ++  G           PV   EEE YFFRLS Y D  +  
Sbjct: 128 YKGTYKGKYCTPCESFWTESQLVNG----CCPDCGRPVVDAEEEAYFFRLSKYAD-RVRD 182

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
              + +F+LP  R NE++ +F+  GL DL +SR +F WGI +  DP++++YVWIDAL NY
Sbjct: 183 LLVNTDFLLPRSRVNEMVHNFIDPGLDDLCVSRTSFKWGIPVDFDPKHVVYVWIDALFNY 242

Query: 239 LTT--TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            T         PD     FWPAD+H IGK+I+RFH+I WPA L+S  +PLPK V+ HG++
Sbjct: 243 TTALGFMNDKYPDSDYETFWPADVHFIGKEIVRFHSIIWPAMLMSMEMPLPKHVYGHGWL 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV+DP  + E    DALRYFL+R+   G DG +  + L  R+N DLAN
Sbjct: 303 LLDGGKMSKSKGNVVDPYLLAERYSADALRYFLLRDFPFGSDGNFSNELLINRINMDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+ +M  K + G +P   A    D+++L     +      +M+      ALA 
Sbjct: 363 DLGNLLSRTTAMADKYFGGTLPENQAAGPEDDALLEKAKGLRARYEADMEAYAFQNALAD 422

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  ++   ++Y DA  PW L K      R + VLY   E +R   +LLQ F+P    KIF
Sbjct: 423 VFDVIDAANKYIDATAPWVLAKNEETKPRLARVLYNLAETLRICTVLLQPFMPDTCVKIF 482

Query: 475 DILFVADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
             L VADE + + S      L     LHK  + IFPR 
Sbjct: 483 GQLNVADEGKTWDSAAAFGTLPVTATLHK-GENIFPRI 519


>gi|282931725|ref|ZP_06337213.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205161|ref|ZP_06922557.1| methionine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|281304168|gb|EFA96282.1| methionine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149739|gb|EFH30036.1| methionine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 662

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/518 (39%), Positives = 316/518 (61%), Gaps = 9/518 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G +  F TGTDEHG KI +
Sbjct: 1   MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYETFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  ++ ++++   LDISYD FIRT++  H    + +++K+  +GDIY
Sbjct: 61  KAEKAGIKPQEYVDGMAKQYKELWKKLDISYDKFIRTSDPEHVKAVQAIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EV+K  +G+         + VQ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HPEFILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLKYYQDHPEFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   +K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI +   G++  PG+  +   ++       + E ++ M      +A
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGLVSKPGSQDDLGNNLAKFADETIAEYQKQMDALHFSQA 420

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  +   V   ++Y D   PW L K    +  + V+    E +R +AI++   + +   +
Sbjct: 421 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAQ 480

Query: 473 IFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           IF+ L +  E    ++L          +     PIFPR
Sbjct: 481 IFEQLGLNFEEADQKALKFGEFAWNIKVTDKPAPIFPR 518


>gi|223985467|ref|ZP_03635526.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
           12042]
 gi|223962556|gb|EEF67009.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
           12042]
          Length = 642

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 206/513 (40%), Positives = 320/513 (62%), Gaps = 13/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+TAIAY + +PHIG+ YE+++AD +AR+ R+ G DV F TGTDEHGQKI   A+ 
Sbjct: 3   EKYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMLGYDVFFQTGTDEHGQKIEDKAKA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV  + FVDQ +   +++ D+++ SYD F+RTT+  H    + ++KK+ D+GDIYK  Y
Sbjct: 63  AGVAPQQFVDQVAGQIKEIWDLMNTSYDKFMRTTDPDHERQVQKIFKKLYDQGDIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E+++ + ++  G           PV+  +EE YFFR+S Y D+LL + E +P
Sbjct: 123 EGWYCKPCESFFTESQIVDGK----CPDCGAPVEKAKEEAYFFRMSKYADRLLKHIEENP 178

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  R+NE+I+   K GL+DL +SR +F WG+ +  DP++++YVWIDALTNY+T  G
Sbjct: 179 EFIQPESRKNEMINNFIKPGLQDLCVSRTSFTWGVPVDFDPKHVVYVWIDALTNYITGLG 238

Query: 244 YLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y  + +       +WPAD+H+IGKDILRFH IYWP  L++ +LPLPK+VF H ++L    
Sbjct: 239 YDCDGNHGEKFKHYWPADVHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLVGEG 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI   +++   GVDA+RY ++ E+   +DG    + + +R+N+DLAN +GNL
Sbjct: 299 KMSKSKGNVIYADDLVRYFGVDAVRYIMLHEMPFAQDGTVTYELMIERINSDLANILGNL 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R++SM  K + G++         D+ ++++       +++ M    +  A+ ++ +L+
Sbjct: 359 VNRTLSMTNKYFGGLVHNANVSDPIDDELIALAKATPANVQKKMDELRVADAIDEIFALL 418

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     DR +TVLY  +E IR  AILL++++P+ +  I D L  
Sbjct: 419 RRSNKYIDETMPWALGKDETKKDRLATVLYNLLESIRIAAILLESYLPETSKAILDQLNT 478

Query: 480 ADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
             + R + S+    +L+ G  +      +F R 
Sbjct: 479 --QQRSYDSVLTFGQLEDGIHVTPKPQILFARI 509


>gi|292670061|ref|ZP_06603487.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648249|gb|EFF66221.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 513

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 224/515 (43%), Positives = 325/515 (63%), Gaps = 10/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I YP+A+ HIGHAY   +AD +ARF RL G DV F TG+DEHGQKI +
Sbjct: 1   MSGKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGCDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT   +VD+    F+++  +L ISYDDFIRT+E RH++  + ++++I D+GDIY
Sbjct: 61  AAEKEGVTPLQYVDRIVAGFQELWRLLGISYDDFIRTSEPRHYELVQNIFQQIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   ++    +       H PVQ + EE YFFR+S Y D+L++Y 
Sbjct: 121 KGAYKGLYCTPCESYWTKLQLD---ENGCCPDCHRPVQEVAEEAYFFRMSKYADRLIAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL + +   +K+WPAD+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYLHDKE-KFSKYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DPI +IEE G DA+RYFL+REI  G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAVRYFLLREITLGQDGNISRDALIGRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T+ D ++  +    ++   E M+   +  A+    +L
Sbjct: 357 LLHRTLSMAKKYRKGVIAKGTGRTDFDAALEEMAQETVKTYTEQMEQMELSAAIKTAWAL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D   PW L K     A    VLY  VE +R  +IL+  F+P  A +I   L 
Sbjct: 417 ISRTNKYIDETAPWTLAKDEAKAAELDAVLYHLVESLRITSILISPFLPVTARRIHAQLG 476

Query: 479 VADENRCFQ---SLDQRLKPGFMLHKTFDPIFPRF 510
            A +    Q   +    L  G  +  T + +FPR 
Sbjct: 477 FATDFDAVQLSDAAWGGLPDGHAVG-TAEQLFPRI 510


>gi|313895444|ref|ZP_07829001.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976339|gb|EFR41797.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 514

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 224/516 (43%), Positives = 331/516 (64%), Gaps = 11/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+A+ HIGHAY   +AD +ARF RL G DV F TG+DEHGQKI +
Sbjct: 1   MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGYDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT + +VD+    F+++  +L ISYDDFIRT+E+RHH+  + ++++I D+GDIY
Sbjct: 61  AAEKEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+ + ++ +  +       H PVQ + EE YFFR+S Y D++L+Y 
Sbjct: 121 KGEYKGLYCTPCESYWTELQLDENGN---CPDCHRPVQEVSEEAYFFRMSKYADRVLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HP+FI P+ RRNE+ISF++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 KEHPDFIQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+ + + +  K+WP D+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYMHDKE-TFHKYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DPI +IEE G DA+RYFL+REI  G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAIRYFLLREITLGQDGNISRDALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T  D S+  + +  ++     M+   +  A+  V + 
Sbjct: 357 LLHRTLSMAKKYRGGVIVKGTGETAFDASLEEIAAETVKMYTAQMEAMELSPAIRTVWAF 416

Query: 421 VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D   PW L K      +  +VLY  VE +   +IL+  F+P  A +I   L 
Sbjct: 417 IARTNKYIDETAPWTLAKDEAKAGQLDSVLYHLVEALHITSILIAPFMPVTARRIHAQLG 476

Query: 479 VADENRCFQSLD----QRLKPGFMLHKTFDPIFPRF 510
            AD+    Q  D     R+  G  +  T + +FPR 
Sbjct: 477 FADDFDAVQLADIAHWGRVAEGHTVG-TAEQLFPRI 511


>gi|295107808|emb|CBL21761.1| methionyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 652

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 212/515 (41%), Positives = 317/515 (61%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI   A
Sbjct: 2   DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+  KGDIYKG
Sbjct: 62  EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           P    +EE YFF++S Y D+L+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGRPCVPAKEEAYFFKMSKYADRLIDYINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S    K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGESSEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     DE + +    V  ++ E M    +  A+ +V +
Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVVEPVDEDLKAFALAVPGKVAEKMDKLRVADAMTEVFT 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L   +++Y D   PW L K     +R +TVLY  VE I   A LL++F+P+   +I   L
Sbjct: 418 LFKRLNKYIDETMPWALAKDEAKKERLATVLYNLVEGITMGATLLESFMPETTERILAQL 477

Query: 478 FVADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
               E R  + L    L P G  + +  + +F R 
Sbjct: 478 NT--EKRTLEDLKTFGLYPSGNKVTEKPEILFARL 510


>gi|153811133|ref|ZP_01963801.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
 gi|149832631|gb|EDM87715.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
          Length = 652

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 213/515 (41%), Positives = 317/515 (61%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI   A
Sbjct: 2   DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRQEGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+  KGDIYKG
Sbjct: 62  EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           P    +EE YFF++S Y D+L+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGRPCVPAKEEAYFFKMSKYADRLIDYINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S    K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGESSEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     DE + +    V  ++ E M    +  A+ +V +
Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVVEPVDEDLKAFALAVPGKVAEKMDKLRVADAMTEVFT 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L   +++Y D   PW L K     DR +TVLY  VE I   A LL++F+P+   +I   L
Sbjct: 418 LFKRLNKYIDETMPWALAKDEAKKDRLATVLYNLVEGITMGATLLESFMPETTERILAQL 477

Query: 478 FVADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
               E R  + L    L P G  + +  + +F R 
Sbjct: 478 N--AEKRTLEDLKTFGLYPSGNKVTEKPEILFARL 510


>gi|260888295|ref|ZP_05899558.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861831|gb|EEX76331.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 665

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 216/513 (42%), Positives = 326/513 (63%), Gaps = 10/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+  YI+T I YP+A+ HIGHAY   IAD +ARF RL   DV F TG+DEHGQKI + A
Sbjct: 13  TRKSFYITTPIYYPSAKLHIGHAYCTTIADAVARFKRLTDHDVFFLTGSDEHGQKIQQKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT   +VD+    F+ +   L IS DDFIRTTE+RH    + ++++I +KGDIYKG
Sbjct: 73  EEEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKG 132

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+Y+ + ++  G            V  +EE+ YFF++S Y D++L+Y E 
Sbjct: 133 KYKGLYCTPCESYWTERQLADGK----CPDCGREVAEVEEDAYFFKMSHYADRVLAYIEE 188

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI +P  P +++YVW DALTNYLT  
Sbjct: 189 NPDFIQPVSRRNEMINFIKQGLEDLCISRTSFDWGIPVPIAPDHVIYVWFDALTNYLTPI 248

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+LD+P+    K+WPAD+H++GK+I+RFH+I WP  L++ +LPLPK V+ HG+++  G+K
Sbjct: 249 GFLDDPE-KFEKYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLIVDGDK 307

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+++I+E G DA+RYFL+REI  G+DG + +D L  R+NADLAN +GNL+
Sbjct: 308 MSKSKGNVVDPVQLIDEFGADAIRYFLLREINLGQDGNFSRDALITRINADLANDLGNLL 367

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+++MI K  DG++      +E D + L+     +      M+   +  A+    + +S
Sbjct: 368 HRTLNMIGKFQDGVVEEARGESEIDRAFLADAESAIAAYEREMEEMKLQSAIKTTWAFIS 427

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K        +  LY   E +R++++L++ F+P+ A KI+  L + 
Sbjct: 428 RANKYIDETMPWALAKDAAKKQELTNTLYNLAESLRRISVLIEPFMPETAAKIWHQLGME 487

Query: 481 DENRCFQSLDQRLKPGFML---HKTFDPIFPRF 510
            +    +  D R   GF+      + + +FPR 
Sbjct: 488 GDFSRVRFADVRTWGGFLAGTHVGSPEQLFPRI 520


>gi|118465949|ref|YP_880395.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118167236|gb|ABK68133.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 519

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 251/511 (49%), Positives = 348/511 (68%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++TAI YPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A  
Sbjct: 2   RPFYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+ T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   Y
Sbjct: 62  EGIGTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E     DG    A+   P+ W EE+ YFFRLSAY DKLL++YE++
Sbjct: 122 SGWYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEAN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT  G
Sbjct: 182 PDFIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+
Sbjct: 242 YPDTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GN++DPI +++  GVD LRYFL+RE+  G+DG Y KD +  R+N DLAN +GNL  
Sbjct: 302 SKSVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTKDAIITRINTDLANELGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+   ++P PG FT  D  +L     +L  +R +  +Q +H  L  +  ++ E
Sbjct: 362 RSLSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASFDSQAMHLGLEAIWLMLGE 421

Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++YF AQ+PW L+K+  +    R  TVLYVT EV+R  A+L+Q  +P  A K+ D+L  
Sbjct: 422 ANKYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPDSAGKLLDLLGQ 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F +L  RL PG +L      +FPR+
Sbjct: 482 GQDRRAFDALGARLAPGTVLP-PPTGVFPRY 511


>gi|290967766|ref|ZP_06559319.1| methionine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782125|gb|EFD94700.1| methionine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 645

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 218/514 (42%), Positives = 319/514 (62%), Gaps = 7/514 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+++ YI+T I YP+A+ HIGH Y   IAD LARFHRL G +V F TG+DEHGQKI +
Sbjct: 1   MAEKKRYYITTPIYYPSAKLHIGHTYCTTIADTLARFHRLRGDEVFFLTGSDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+    +V+     F+D+   L IS DDFIRTTE RH    + L +    KGDIY
Sbjct: 61  AAEEKGIQPIEYVNDIVALFQDLWKRLQISNDDFIRTTEARHEKVVQKLMEISYQKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y+GWY    E+++ ++++ +G           P++ ++EE YF +++ Y D+ L + 
Sbjct: 121 KGEYTGWYCTPCESFWPENKLPEG--KHICPDCGRPLELVKEEAYFLKMNKYADRWLQFI 178

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +PEFI P  RRNE+I+FVKSGL+DL +SR +FDWG+K+P DP++++YVW DAL NYLT
Sbjct: 179 EENPEFIQPESRRNEMIAFVKSGLEDLCVSRTSFDWGVKVPWDPKHVVYVWFDALANYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYLDNP+  K KFWPA LH++GK+I+RFH I WP  L+S +LPLPK+VF HG+++  G
Sbjct: 239 AIGYLDNPEQFK-KFWPATLHLVGKEIVRFHTIIWPIILMSCDLPLPKQVFGHGWLIVDG 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP+ +I   G DALRY+L++EI  G+DG +       R+N+DLAN +GN
Sbjct: 298 TKMSKSLGNVVDPVPLIARYGADALRYYLLKEIRLGQDGNFSLPSFLGRINSDLANDLGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R+++M+ K   G++P P A    D  +    + +L    + M+   I+ A+  +   
Sbjct: 358 LLQRTLAMVEKYEQGIVPAPSATAPVDMQLRQAAAEMLDVYTQAMETMQINEAINALWGF 417

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K +   +R  TVLY  +E +R +AI +   +P  A +I+  L 
Sbjct: 418 IHRTNKYIDETMPWSLAKEDAQRERLRTVLYNLIEALRIIAISVSPIMPACAEEIWRQLG 477

Query: 479 VADENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +          +      P          +FPR+
Sbjct: 478 LQAFRTVGLEAAATWGAYPAQTRIYKGKALFPRY 511


>gi|289551711|ref|YP_003472615.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181242|gb|ADC88487.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 657

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 216/520 (41%), Positives = 327/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D      + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF +S Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPIYENGKIVGGKSPDSGHEVELVKEESYFFNISKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDDALFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E D+++ ++    +++  +NM++     ALA
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYTGPKHELDDAMEALALETVKDFNDNMESFQFSVALA 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L+S  ++Y D   PW L K +  +   + V+   VE IR   +LL+ F+     ++
Sbjct: 423 TVWKLISRTNKYIDETTPWVLAKDDSQKDMLANVMAHLVENIRFATVLLRPFLTHAPREV 482

Query: 474 FDILFV-ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           F  L + + E     SL+    LK   M+ +   PIFPR 
Sbjct: 483 FKQLNINSPELFELASLERYGALKQPVMVTEKPSPIFPRL 522


>gi|253581458|ref|ZP_04858683.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251836528|gb|EES65063.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 641

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 214/514 (41%), Positives = 312/514 (60%), Gaps = 13/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+G AY  I ADV+AR+ +  G DV F TGTDEHGQK+ + A+ 
Sbjct: 3   KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETARQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D  +  F +M   L+I Y DFIRTTE RH +  + + KK+ D GDIYKG Y
Sbjct: 63  KGYTPQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYDNGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E +  ++++    +G +       ++ + EE YFF++S YQD LL++ +SHP
Sbjct: 123 SGKYCVSCETFVPENQIV---NGNHCPDCGKELRVVREESYFFKMSKYQDALLAHIDSHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEV+SF+K GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY
Sbjct: 180 DFILPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +NP+    KFW     +H++GKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 240 ENNPE-LFDKFWTNGEVMHLLGKDIVRFHAIIWPCMLLSAGVKLPDNIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DPI   ++ GVDA RY L+RE+  G DG Y    +  R+N+DLAN +GNL+
Sbjct: 299 MSKSKGNVVDPIAESKKYGVDAFRYCLLREVQFGNDGDYSTKSVVTRINSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G+I         D+ I ++ +  L E+ E M      ++L  +   +S
Sbjct: 359 NRTLGMYKKYFNGVIVDGTERDVFDDEIENLWNETLSEVTEQMNIVQFSKSLEAIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K     DR + V+   V  + ++A+++  ++P  A KI++ L V 
Sbjct: 419 RLNKYIDETMPWSLAKDENKKDRLAVVMNHLVNGLYKIAVMVYPYMPAAAQKIWNQLGVE 478

Query: 481 DENRCFQSLD----QRLKPGFMLHKTFDPIFPRF 510
              R  +  D      L  G +L    +PIFPR 
Sbjct: 479 KLVRDAKVADITGWNLLPAGHILGNA-EPIFPRL 511


>gi|319745565|gb|EFV97867.1| methionine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 671

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 207/517 (40%), Positives = 326/517 (63%), Gaps = 10/517 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI + A+
Sbjct: 10  KKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQKAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY G 
Sbjct: 70  EAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGE 129

Query: 124 YSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D+L 
Sbjct: 130 YTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYADRLK 189

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWIDAL 
Sbjct: 190 AYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWIDALM 249

Query: 237 NYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY++  GY  + D S   KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +HG+
Sbjct: 250 NYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVAHGW 309

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 310 FVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 369

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     RAL 
Sbjct: 370 NDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPRALE 429

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F+ + ++ I
Sbjct: 430 AVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPFMMETSDAI 489

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +       +     L  G  +     PIFPR 
Sbjct: 490 MEQLGLGTTFDLEKLTFAGLPEGVRVVAKGSPIFPRL 526


>gi|326804011|ref|YP_004321829.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650118|gb|AEA00301.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 666

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 212/519 (40%), Positives = 320/519 (61%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y++T I YP+ Q HIG++Y  I AD +AR+ RL G +V F TG DEHG KI + A
Sbjct: 4   TKEPFYVTTPIYYPSGQLHIGNSYSTIAADTIARYKRLMGHEVFFLTGADEHGLKIQQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G++ K +VD+ +   + +   LDIS D FIRTT+  H    + +++++ D+GDIY G
Sbjct: 64  EEEGISPKAYVDRMAEGMQKLWKSLDISNDKFIRTTDDYHVKAVQDIFEQLLDQGDIYLG 123

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EVY+  DG+    +    + V+ ++EE YFF++S Y D+L
Sbjct: 124 EYEGWYSVSDEEYFTETQLAEVYRDDDGKVIGGKAPSGHEVELVKEESYFFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YYE HP+FI P  R+ E+I+   K GL+DL+++R +F WGI +  +P++++YVWIDAL
Sbjct: 184 LQYYEDHPDFIQPESRKKEMINNFIKPGLEDLAVTRTSFSWGIPVRSNPKHVIYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY    D    KFWPA++H++GK+I+RFH IYWP  L++ +LPLPK+VF HG+
Sbjct: 244 ANYITALGYGSEDDSRYQKFWPANVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L +  K+SKS GNV+ P  +I+  G+DALRY+L+RE+  G DG +  D    R+N DLA
Sbjct: 304 LLMQDGKMSKSKGNVVYPEMLIDRYGLDALRYYLMREVQFGSDGVFTPDNFVNRINFDLA 363

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R++SM+ K         PG  T+ D  + +V    ++    NM N     AL
Sbjct: 364 NDLGNLLNRTISMLNKYQAGRAGAYPGQVTDYDADLEAVIEDNVRAYFGNMDNFHFSLAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                ++S  ++Y D   PW L K +       +VLY  V+ +R +AIL+Q  + +    
Sbjct: 424 DNTWKIISRANKYIDETMPWVLAKDDSNQAELQSVLYHLVDALRIIAILIQPVMTQTPKL 483

Query: 473 IFDILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
           IF+ L ++D +  F SL+  L P    +    +PIFPR 
Sbjct: 484 IFEQLGISDSDHSFASLEIGLYPAAAQVIAKGEPIFPRL 522


>gi|58038507|ref|YP_190471.1| methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58000921|gb|AAW59815.1| Methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 516

 Score =  458 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 235/507 (46%), Positives = 341/507 (67%), Gaps = 2/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  I+T I Y N  PHIGHAY  I ADVLARFHRL+G +VLF +GTDEHGQK+ + A  
Sbjct: 8   RRFIITTPIFYVNGAPHIGHAYTSIAADVLARFHRLNGEEVLFVSGTDEHGQKVEQTAVA 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + + D+ S +FR M   + IS D+FIRTTE+RH    + LW+K++  G IY G Y
Sbjct: 68  KGMDPQAYADEVSASFRQMQKDMAISTDEFIRTTEERHKGAAKALWEKVAANGHIYLGAY 127

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS RDEA+  +DE+ K  DG +      PV+ ++E  YFFRLS +QD+LL  YE +P
Sbjct: 128 EGWYSTRDEAFIGEDELVKKPDGTFVAPSGAPVERVKEPSYFFRLSDFQDRLLKLYEDNP 187

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P+  R E+ SFV+ GL+DLS+SR +F WG+ +P+DP ++MYVW DAL NYLT  GY
Sbjct: 188 DFIGPVGPRREIESFVRQGLRDLSVSRTSFKWGVPVPNDPDHVMYVWFDALANYLTAVGY 247

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D  +AKFWPAD+H++GK+I RFH +YWPAFL++A + LPK VF+HG+   +GEK+S
Sbjct: 248 PDLNDP-RAKFWPADVHIVGKEIARFHCVYWPAFLMAAGIDLPKSVFAHGWWTVEGEKMS 306

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP  + +E G+DALR+FL+RE+  G D  + +  +  R N +LAN +GNL  R
Sbjct: 307 KSLGNVLDPKALADEFGLDALRFFLMREVPFGGDSNFSRRSMITRTNVELANDLGNLCQR 366

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S + ++  G++P  G  TE D+++L++ + +   + E ++ + I  AL +V  ++   
Sbjct: 367 TLSQVARNLGGVLPERGTLTEDDQAMLAMVTLLPTIMSEQIERKAITDALEEVWKVIRAA 426

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW LKKT+P+R + VL V V++IR +A +LQ ++P   +++   L V D+ R
Sbjct: 427 NSYIDRQAPWALKKTDPERMADVLRVLVDMIRGIATMLQPYMPNTMDRMLTQLGVQDDER 486

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            F +L+  L  G  L K  + +FPRF+
Sbjct: 487 TFAALETPLPAGRTLPKP-EGLFPRFV 512


>gi|323690917|ref|ZP_08105209.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323505042|gb|EGB20812.1| methionine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 657

 Score =  458 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 304/512 (59%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+I+AD +AR+ R  G DV F TGTDEHGQKI   A+
Sbjct: 6   KKPYYITTAIAYTSGKPHIGNTYEIILADSIARYKREQGFDVRFQTGTDEHGQKIELKAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD  +   + + D+++ SYD FIRTT+K H +  + ++KK+ DKGDIYKG 
Sbjct: 66  EAGVTPQEFVDGVAAQIKSIWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKGDIYKGH 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   +V  G           PV   +EE YFF++S Y  +L+ +   H
Sbjct: 126 YEGLYCTPCESFWTSSQVTDGK----CPDCGRPVVPAKEEAYFFKMSKYAQQLIDHINEH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDALTNYITGL 241

Query: 243 GYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + +      K+WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L   
Sbjct: 242 GYDCDGNHGELFGKYWPADLHLIGKDIIRFHTIYWPIFLMALELPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G +   GA  E+D  + +     ++ + E M    +  A+ ++  +
Sbjct: 362 LVNRTISMSNKYFGGEVADKGAAGEADADLKATVLEAVKRVDEKMDKLRVADAITEIFGI 421

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ A KI   L 
Sbjct: 422 FRRSNKYIDETMPWTLAKDEAQKDRLATVLYNLTEAITIGASLLYSFMPETAEKILAQLN 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                            G  +    + +F R 
Sbjct: 482 TQKRTLEEMGTFGLYPSGGKVTDKPEILFARM 513


>gi|240850631|ref|YP_002972031.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267754|gb|ACS51342.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 519

 Score =  458 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 252/510 (49%), Positives = 364/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I +DVLARF RL+G +V F +GTDEHG K+ + A 
Sbjct: 2   RDTYYITTPIFYPNGAPHIGHAYSAIASDVLARFQRLNGKNVFFLSGTDEHGLKMQQTAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+NS  F+ M  VL+ S DDFIRTTE+RH+  C+ +WKK+   GDIY G 
Sbjct: 62  ALGMTPQQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEANGDIYLGR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R EAYY + +   G D      +  +PV+W EEE YFFRLS Y+  LL YYE 
Sbjct: 122 YTGWYSVRQEAYYEEKDTEIGPDNIRREKELGSPVEWNEEESYFFRLSHYEKALLEYYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ERRNE+ISF+KSGLKD+S+SR +F+WGI +P++P+++MYVW+DALTNYL+  
Sbjct: 182 HPDFIAPLERRNEIISFIKSGLKDISISRASFNWGIAVPENPKHVMYVWVDALTNYLSAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ +     K  FWPA+ H+IGKDI+RFHA+YWPAFL+SA + LPK +F+HGF+L++G K
Sbjct: 242 GFFNENS-KKRDFWPANTHIIGKDIIRFHAVYWPAFLMSAGIELPKNIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYFL+RE+  G+DG Y  + L  R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDHYGLDQVRYFLLREVPFGQDGSYSHESLVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R +SMI K+ +  +P P +F   D+ +L    +VL+ + + M +  +H AL+ + S+V+
Sbjct: 361 QRCLSMIAKNCNAQVPRPTSFLAQDKQLLEQSLQVLETVHQAMSSYSMHLALSAIFSIVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K + +R STVLY+TVE++R++ I+L  F+P+ A K+ D L VA++
Sbjct: 421 DANRYFANEQPWSLRKNDQERFSTVLYITVEILRRIGIMLLPFIPQSAAKLLDSLAVAED 480

Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +R    +   +++ G  L    +PIFPR++
Sbjct: 481 DRLLYHISHSKIQEGLDLP-PPEPIFPRYI 509


>gi|253579415|ref|ZP_04856685.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849513|gb|EES77473.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 652

 Score =  458 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 208/513 (40%), Positives = 312/513 (60%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   EKQKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRQQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K FVD  S   + + D+++ SYD FIRTT++ H    + ++KK+  KGDIYKG
Sbjct: 62  EEAGITPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           P    +EE YFF++S Y DKL+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGRPCVPAKEEAYFFKMSKYADKLIDYINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGESTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     D+ + +    V  ++ E M    +  A+ +V +
Sbjct: 358 NLVNRTISMSNKYFGGVVENKGVTEPVDDDLKNFILSVPAKVNEKMDKLRVADAMTEVFT 417

Query: 420 LVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +    ++Y D   PW L K     DR +TVLY  VE I   A+LL++F+P+   +I   L
Sbjct: 418 IFKRCNKYIDETMPWALAKDEEKKDRLATVLYNLVEGICIGAVLLKSFMPETTERILAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              D              G  + +  + +F R 
Sbjct: 478 NAQDRELEDLKTFGLYPSGNKVTEKPEILFARL 510


>gi|268610250|ref|ZP_06143977.1| methionyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 661

 Score =  458 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/517 (38%), Positives = 304/517 (58%), Gaps = 13/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+  PHIGH Y  +  D +AR+ R+ G DV+F TGTDEHG KI + A
Sbjct: 2   SKKPFYITTPIYYPSGNPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGLKIEQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT K +VD     F+++   ++ISYD +IRTT+  H +  + ++K + DKG IYKG
Sbjct: 62  AEQGVTPKEYVDVIVDRFKNLWKYMNISYDRYIRTTDDYHVEAVQKIFKALYDKGYIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSG Y    E+++ D ++    +       H PV++ +EE YFF++S + D++      
Sbjct: 122 EYSGKYCTLCESFWTDSQL---DENGCCPECHRPVKYAKEEAYFFKMSPFADRIEKLLLE 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
                        V +F+K GL+DL +SR TF WG+ +  D ++++YVWIDAL+NY+T  
Sbjct: 179 TDYLRPKTRAVELVNNFIKPGLEDLCVSRTTFKWGVPVSFDDKHVVYVWIDALSNYITAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE- 301
           GY ++      K+WPAD+H++ KDI+RFHAI WPA L++  +PLPK +  HG+I   G+ 
Sbjct: 239 GYENSAYNDYEKYWPADVHMVAKDIMRFHAIIWPAMLMALEIPLPKHLAVHGWITMAGKN 298

Query: 302 ----KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSLGNV+DP  + E  G DA+RY ++RE+A G D  +  + +  R+N+DLANG
Sbjct: 299 GESEKMSKSLGNVVDPFVLGERYGQDAIRYHILREMALGADSLFSNEIMINRINSDLANG 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNLVSR+V+M+ K + G IP+       DE   +V   +L E+ + +    + +AL  +
Sbjct: 359 FGNLVSRTVAMVDKYFGGTIPSEREDDALDEEFRNVILGLLPEVDKYVDETKLKQALETI 418

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              VS  ++Y D  +PW+L K      R ++VLY  +E IR  + LL  F+P    K+++
Sbjct: 419 FEGVSRANKYIDETEPWKLGKDESKKARLASVLYNLLEAIRITSALLAPFMPTTMPKVWE 478

Query: 476 ILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +  +  +  +  LD+   L     +HK  + +FPR 
Sbjct: 479 QIGASGADVEYSKLDKFGVLPENVTVHK-GEILFPRI 514


>gi|323483574|ref|ZP_08088959.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum
           WAL-14163]
 gi|323403130|gb|EGA95443.1| hypothetical protein HMPREF9474_00708 [Clostridium symbiosum
           WAL-14163]
          Length = 657

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 205/512 (40%), Positives = 304/512 (59%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A+
Sbjct: 6   KKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGFDVRFQTGTDEHGQKIELKAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD  +   + + D+++ SYD FIRTT+K H +  + ++KK+ DKGDIYKG 
Sbjct: 66  EAGVTPQEFVDGVAAQIKSIWDLMNTSYDKFIRTTDKEHEEQVQKIFKKLYDKGDIYKGH 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   +V  G           PV   +EE YFF++S Y  +L+ +   H
Sbjct: 126 YEGLYCTPCESFWTSSQVTDGK----CPDCGRPVVPAKEEAYFFKMSKYAQQLIDHINEH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVSFDPKHVTYVWLDALTNYITGL 241

Query: 243 GYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + +      K+WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L   
Sbjct: 242 GYDCDGNHGELFGKYWPADLHLIGKDIIRFHTIYWPIFLMALELPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G +   GA  E+D  + +     ++ + E M    +  A+ ++  +
Sbjct: 362 LVNRTISMSNKYFGGEVADKGAAGEADADLKATVLEAVKRVDEKMDKLRVADAITEIFGI 421

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ A KI   L 
Sbjct: 422 FRRSNKYIDETMPWTLAKDEAQKDRLATVLYNLTEAITIGASLLYSFMPETAEKILAQLN 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                            G  +    + +F R 
Sbjct: 482 TQKRTLEEMGTFGLYPSGGKVTDKPEILFARM 513


>gi|256851968|ref|ZP_05557355.1| methionyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661462|ref|ZP_05862375.1| methionyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615380|gb|EEU20570.1| methionyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547917|gb|EEX23894.1| methionyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 668

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 203/518 (39%), Positives = 316/518 (61%), Gaps = 9/518 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G +  F TGTDEHG KI +
Sbjct: 7   MADKKTFYITTPIYYPSGRLTIGNAYTTIAADSMARYKRSQGYETFFLTGTDEHGLKIEQ 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  ++ ++++   LDISYD FIRT++  H    + +++K+  +GDIY
Sbjct: 67  KAEKAGIKPQEYVDGMAKQYKELWKKLDISYDKFIRTSDPEHVKAVQAIFEKLLKQGDIY 126

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EV+K  +G+         + VQ ++E  YFFR+S Y D
Sbjct: 127 LGEYTGWYSVEDEEYFTESQLKEVFKDDNGKVIGGIAPSGHKVQLVKEPSYFFRMSKYAD 186

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HPEFILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 187 RLLKYYQDHPEFILPHSREKEMVNNFIKPGLEDLSVTRTTIDWGIPVPSDPKHVVYVWID 246

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 247 ALSNYITALGYGSDDDSLFKKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 306

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   +K+SKS GN + P  +++  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 307 GWVLIYKDKMSKSKGNAVYPESIVDRFGLDALRYYLMRAIPFGSDGSFSPEDFVERVNFD 366

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI +   G++  PG+  +   ++       + E ++ M      +A
Sbjct: 367 LANDLGNLLNRTVSMINQYQAGLVSKPGSQDDLGNNLAKFADETIAEYQKQMDALHFSQA 426

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  +   V   ++Y D   PW L K    +  + V+    E +R +AI++   + +   +
Sbjct: 427 LDAIWKFVGRANKYIDETTPWVLNKEGKTEELARVMANLAESLRLIAIMISPIMTESPAQ 486

Query: 473 IFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           IF+ L +  E    ++L          +     PIFPR
Sbjct: 487 IFEQLGLNFEEADQKALKFGEFAWNIKVTDKPAPIFPR 524


>gi|225026669|ref|ZP_03715861.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
 gi|224956039|gb|EEG37248.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
          Length = 654

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 207/513 (40%), Positives = 313/513 (61%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI   A
Sbjct: 2   SKKPYYITTAIAYTSGKPHIGNTYEIVLADAIARFKRKEGYDVRFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG++ K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ DKGDIYKG
Sbjct: 62  AEAGISPKEFVDNTAGEIKRIWDLMNTSYDKFIRTTDEDHEKQVQKIFKKLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           P Q  +EE YFFR+S Y D+L+ Y   
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGRPCQPAKEEAYFFRMSKYADRLIQYIND 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P+FI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 NPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + +      K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 LGYDCDGESGELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    D L +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVITWDLLVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G     D++++ V      ++ + M    +  A+ ++ +
Sbjct: 358 NLVNRTISMSNKYFGGVVANSGVTDGFDKNLMDVALDTKHKVIKCMSKLRVADAMTEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR +TVLY  VE I   A LL  F+P+ A +IF  L
Sbjct: 418 LFKRCNKYIDETMPWALAKDPAKQDRLATVLYNLVESITIGASLLSPFMPETAERIFAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++       +    + G  +    + +F R 
Sbjct: 478 NSSERTMDELEMFGLYESGKKVTDKPEILFARL 510


>gi|163814866|ref|ZP_02206254.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
 gi|158449805|gb|EDP26800.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
          Length = 678

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 205/512 (40%), Positives = 304/512 (59%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 3   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKRFAGYDVRFMTGTDEHGQKIENKAF 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T K FVD+ S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG 
Sbjct: 63  ENMQTPKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGH 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ D ++  G           PVQ  +EE YFF++S YQDKL+ + E H
Sbjct: 123 YVGKYCTPCESFFTDGQLIDGK----CPDCGRPVQEAKEEAYFFKMSKYQDKLMKHIEQH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  RRNE+++   K GL+DL +SR +F WGI +  DP++++YVW+DAL+NY+T  
Sbjct: 179 PEFIQPESRRNEMVNNFLKPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWVDALSNYITGL 238

Query: 243 GYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  +        K+WPADLH+IGKDILRFH IYWP  L++  LPLPK+VF H +++   
Sbjct: 239 GYDVDGKSDEKFYKYWPADLHLIGKDILRFHTIYWPIMLMALGLPLPKQVFGHPWLIQSD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+   ++++  GVDA+R+F++ E+    DG    + + +R+N++LAN +GN
Sbjct: 299 GKMSKSKGNVMYADDMVDIFGVDAVRFFVLHEMPFENDGVISWELMVERLNSELANTLGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++         DE +  V      ++ E M    +  A+ ++ +L
Sbjct: 359 LVNRTISMSNKYFGGIVTNTNVTEPVDEDLKKVVMDCRYKVAECMDKLKVADAITEIFAL 418

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P+   KI   L 
Sbjct: 419 FKRCNKYIDETMPWALAKEEDKKDRLNTVLYNLVESIIIGATLLEPYMPETTEKIMAQLS 478

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                          K G  + +  + +F R 
Sbjct: 479 TEKRKVTELGKFGLYKSGTKVTEQPEILFARL 510


>gi|330686067|gb|EGG97689.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 320/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +  Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVEPIYENGKIVGGKSPDSGHEVELVKEESYFFNIKKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++E  ENM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALDTVKEFHENMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K    +     V+   VE IR   +LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFITHAPKEI 482

Query: 474 FDILFVAD-ENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           F  L + + E   F SL+    L     +     PIFPR 
Sbjct: 483 FKQLNINNPELMEFSSLETYGALTEPITVIAKPTPIFPRL 522


>gi|314937303|ref|ZP_07844645.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654599|gb|EFS18349.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 659

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 215/523 (41%), Positives = 326/523 (62%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI +
Sbjct: 1   MMAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY
Sbjct: 61  KAQKAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF ++ Y D
Sbjct: 121 LGEYEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHEVELVKEESYFFNINKYTD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL +Y+++P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWID
Sbjct: 181 RLLEFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+H
Sbjct: 241 ALVNYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N D
Sbjct: 301 GWILMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     
Sbjct: 361 LANDLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSV 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL+ V  L+S  ++Y D   PW L K    +     V+   VE IR   +LL+ F+    
Sbjct: 421 ALSTVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAP 480

Query: 471 NKIFDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +IF  L + + +     SL+    L+   M+ +   PIFPR 
Sbjct: 481 KEIFKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRL 523


>gi|227877968|ref|ZP_03995972.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256844348|ref|ZP_05549834.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849249|ref|ZP_05554682.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047264|ref|ZP_06020222.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381475|ref|ZP_06627470.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
           214-1]
 gi|312978357|ref|ZP_07790099.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862438|gb|EEJ69953.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256613426|gb|EEU18629.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256714025|gb|EEU29013.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572509|gb|EEX29071.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921945|gb|EFD98952.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
           214-1]
 gi|310894700|gb|EFQ43772.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 658

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 206/520 (39%), Positives = 314/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   L+ISYD FIRTT+K H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLNISYDKFIRTTDKEHVAAVQKIFEKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++   K GL+DLS++R T +WGI +  DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVLSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGDDGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +     +   P A  E  + +    + V+ + RENM +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGHVDAVPVAQAEFGKDLQDTAASVINDYRENMDSLHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LVS  ++Y D   PW L K    +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDNIWKLVSRANKYIDETTPWALNKEGKKEELSKVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            +F  L +  +N   + L          + +   PIFPR 
Sbjct: 481 IMFKQLGLNWDNEDAKHLAFGDFDWDVKVIEKPQPIFPRL 520


>gi|227512284|ref|ZP_03942333.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227084459|gb|EEI19771.1| methionine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 675

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 206/519 (39%), Positives = 314/519 (60%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D +AR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + +VD+ ++  +++   L+IS   FIRTT+  H      +++++ D+GDIY 
Sbjct: 63  ADKLGMAPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L  YY+ HP+FI P  R NE+I +F+  GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    RVN DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G+IP   A   E+D+ +  V    +   +++M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPGFKAGVNEADKELEEVSKESIASFKKSMDDLHFSEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L++V  LVS+ ++Y D  +PW L K   + ++ ++V+      +R +A L+   +     
Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           +IF  L + DE    ++LD   L  G        PIFPR
Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPTGAKTVAKGTPIFPR 520


>gi|254774038|ref|ZP_05215554.1| methionyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 519

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 250/511 (48%), Positives = 349/511 (68%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++TAI YPN  PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+ + A  
Sbjct: 2   RPFYVTTAITYPNGDPHVGHAYEYIATDAIARFKRLDGFDVRFLTGTDEHGLKMVETAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+ T     +NS  F+ + + L+IS+D FIRTT+  HH+  + +W+++   GDIY   Y
Sbjct: 62  EGIDTAELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E     DG    A+   P+ W EE+ YFFRLSAY DKLL++YE++
Sbjct: 122 SGWYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFRLSAYTDKLLAHYEAN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV  GL+DLS+SR +FDWG+K+PD P ++MYVW+DALTNYLT  G
Sbjct: 182 PDFIAPEVRRNEVVSFVSGGLRDLSISRTSFDWGVKVPDHPDHVMYVWVDALTNYLTGVG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPADLH+IGKDI+RFH +YWPAFL+SA + LP++VF+HGF+L++GEK+
Sbjct: 242 YPDTESEMFRRYWPADLHMIGKDIIRFHTVYWPAFLMSAGIELPRRVFAHGFLLNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GN++DPI +++  GVD LRYFL+RE+  G+DG Y +D +  R+N DLAN +GNL  
Sbjct: 302 SKSVGNIVDPITLVDTFGVDQLRYFLLREVPFGQDGSYTEDAIITRINTDLANELGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI K+   ++P PG FT  D  +L     +L  +R +  +Q +H  L  +  ++ E
Sbjct: 362 RSLSMIAKNLHSVVPEPGDFTGDDRELLQTADGLLPRVRASSDSQAMHLGLEAIWLMLGE 421

Query: 424 VDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++YF AQ+PW L+K+  +    R  TVLYVT EV+R  A+L+Q  +P+ A K+ D+L  
Sbjct: 422 ANKYFSAQQPWVLRKSESEADQTRFRTVLYVTCEVVRIAALLVQPVMPESAGKLLDLLGQ 481

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F +L  RL PG +L      +FPR+
Sbjct: 482 GQDRRAFDALGARLAPGTVLP-PPTGVFPRY 511


>gi|210623269|ref|ZP_03293686.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
 gi|210153670|gb|EEA84676.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
          Length = 644

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 213/515 (41%), Positives = 311/515 (60%), Gaps = 12/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+ + HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKPTFYVTTPIYYPSGKLHIGHTYTTVAADAIARFKRFCGYDVKFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T   ++D    + + +   LDISYDDFIRTTE RH +  + ++ K+ ++GDIYKG
Sbjct: 62  KEAGMTEIEYLDGMIADIKALWKKLDISYDDFIRTTEPRHTEIIQKIFTKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG             +EE YFF+LS Y+D  L    S
Sbjct: 122 TYEGRYCTPCESFWTESQLI---DGTKCPDCGRETYVAKEEAYFFKLSKYED-RLKELFS 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             +F LP+ RRNE++ +F+  GL+DL ++R TFDWGI +P D ++++YVW+DAL NY+T 
Sbjct: 178 RDDFCLPVSRRNEMVSNFLDKGLEDLCVTRTTFDWGIPVPFDEKHVIYVWVDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+ + D    K+WPA +H+  K+I RFH I WPA L++  L +PK+V+ HG+IL   +
Sbjct: 238 LGYMTDNDEEFKKYWPASVHLTAKEITRFHTIIWPAILMALGLEVPKQVYGHGWILFDDD 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  GVDAL+YFL+RE + G+DG Y       R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPGPMIERYGVDALKYFLLREFSFGQDGSYTNRNFINRINSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+V+M+ K  +G+IP     TE DES+    +   ++    M     H AL  V  LV
Sbjct: 358 VSRTVAMVEKYNEGLIPEATVATEFDESLKEQAAASAKDFEAQMDALQFHEALESVWKLV 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     +  +TVLY   E IR +A L+   +   AN+I+D L +
Sbjct: 418 RRTNKYIDETMPWALAKDEAKKEELNTVLYNLCESIRIIATLINPIMNTTANRIYDQLGI 477

Query: 480 A--DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           A  ++   ++S+     +K G  +HK  + +FPR 
Sbjct: 478 AGQEDITNWESVKSFGLIKVGTKVHK-GEALFPRL 511


>gi|116628880|ref|YP_814052.1| methionyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094462|gb|ABJ59614.1| methionyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 681

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 204/520 (39%), Positives = 316/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 24  MAEKKTFYITTPIFYPSGKLTIGNAYTAIAADAMTRYKKSRGFDTFFLTGTDEHGLKIEQ 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++++  +LD+SYD FIRTT++ H    + +++K+  +GDIY
Sbjct: 84  KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 143

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 144 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 203

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 204 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 263

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 264 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 323

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  + +  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 324 GWVLMRDGKMSKSKGNAVYPEMIAKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 383

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P      E  + ++      + E ++ M      +
Sbjct: 384 LANDLGNLLNRTVSMINQYQDGYVAPVAADQDEFAQDLIKTAKETIAEYQKQMDALHFSQ 443

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K    +  S V+    E +R +AIL+   + +   
Sbjct: 444 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 503

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +       + L+         + +   PIFPR 
Sbjct: 504 KMFNQLGLDWNKEAQKKLEFGAFDWDIKVTEKPTPIFPRL 543


>gi|296284128|ref|ZP_06862126.1| methionyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 520

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 243/512 (47%), Positives = 338/512 (66%), Gaps = 9/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI YPN +PHIGHAYE + ADV+ARF RL G DV F TGTDEHG K+A+ A+ 
Sbjct: 3   EPYYITTAIHYPNGKPHIGHAYETVAADVIARFQRLKGRDVRFQTGTDEHGLKMARKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D+ S  FRD+ D L+ISYD FIRTTE  HH   + LW+++   GD+Y   Y
Sbjct: 63  QGKTPRELADEMSGYFRDLFDRLNISYDRFIRTTEAGHHTASQALWRRMEANGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+ +G  G+  + Q  PV+W  EE +FFRLS YQDKLL  Y S P
Sbjct: 123 EGWYSVRDEAFYDEKELVEGEGGEKLSPQGTPVEWTVEESWFFRLSKYQDKLLDLYASQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+ FV+ GL+DLS+SR +FDWG+++P    ++MYVW+DALTNY++  GY
Sbjct: 183 DFIQPDSRRNEVMRFVEGGLRDLSISRTSFDWGVQVPGAEDHVMYVWVDALTNYISGLGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               +G+  K+WPADLH+IGKDI+RFH +YWPAFL+SA + LP++V+ HGF+L++G+K S
Sbjct: 243 --PEEGADWKYWPADLHLIGKDIIRFHTVYWPAFLMSAGVDLPRQVYGHGFLLNRGQKES 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP  + E+ GVDALRYFL+REIA G+DG Y  + +  R NA+LAN  GNL  R
Sbjct: 301 KSLGNVTDPNVLAEQFGVDALRYFLMREIAFGQDGSYSPEAIVTRANAELANSFGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE-IRENMQNQLIHRALAQVISLVSE 423
           ++SMI K+ DG +       + D+++L+      +E + +  +       +   +  V  
Sbjct: 361 TLSMIAKNLDGELGAYSPAGD-DKALLTTVQDACREGLPKQFEKLAFSTGIEAWMKAVYA 419

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            ++Y D Q PW LKKT+P+R  TVL      +R LAI +Q  +P+ A+ +  +L +A++ 
Sbjct: 420 CNQYVDEQAPWALKKTDPERMRTVLQTLFIALRDLAIAIQPVIPEKADHLLTMLGIAEDA 479

Query: 484 RCFQSLDQRLKPGFML-----HKTFDPIFPRF 510
           R F+ L      G ++          P+FPR 
Sbjct: 480 RTFEDLADEGWYGALVRTGYRVAPPSPLFPRL 511


>gi|227894430|ref|ZP_04012235.1| methionine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863800|gb|EEJ71221.1| methionine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 658

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 204/520 (39%), Positives = 317/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRAQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT+++H    + +++K+  +GDIY
Sbjct: 61  KAEAQGIKPQQFVDKMAASYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLVKYYKEHPDFILPHSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++  LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALGLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  +   P +  E  + +      V+ E R+ M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGHVDAVPASQDEFGKDLQDTAVNVISEYRKYMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKKEELSHVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L ++ ++   + L          + +   PIFPR 
Sbjct: 481 KMFEQLGLSWDDEAARKLAFSDFGWNVKVTEKPKPIFPRL 520


>gi|116511600|ref|YP_808816.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107254|gb|ABJ72394.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 666

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 208/519 (40%), Positives = 315/519 (60%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +  + +++K+ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVQKIFEKLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ------YYNAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ + ++ +    +            + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEVFKDEAGNVTGGIAPSGHEVEWVEEESYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL +YE++P FI P  R+NE+I+   K GL+DL++SR TF WGI +  +P++++YVW+D
Sbjct: 181 WLLDFYEANPTFIEPAIRKNEMINNFIKPGLEDLAVSRTTFTWGIPVKSNPKHVVYVWLD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  G+  + D    KFWP  ++++GK+I+RFH IYWP F  +  +  PK+VF+H
Sbjct: 241 ALFNYVTALGFYGDDDSLYKKFWP-GVNMVGKEIVRFHTIYWPIFCKALGIEPPKQVFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A    VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGSLLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + +E+   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDEESFSLENLAFGYSFTHPVVAKGQPIFPRL 518


>gi|238852847|ref|ZP_04643252.1| methionine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852547|ref|ZP_06261889.1| methionine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311111303|ref|ZP_07712700.1| methionine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|238834541|gb|EEQ26773.1| methionine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556289|gb|EFB61909.1| methionine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066457|gb|EFQ46797.1| methionine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 658

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 204/520 (39%), Positives = 316/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIFYPSGKLTIGNAYTAIAADAMTRYKKSRGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++++  +LD+SYD FIRTT++ H    + +++K+  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKELWKMLDVSYDRFIRTTDEDHVKAVQKIFEKLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVY+  DG     +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYRDDDGNVIGGKAPSGHEVRLVKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ HP+FILP  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLQYYKDHPDFILPHSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L +  K+SKS GN + P  + +  G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMRDGKMSKSKGNAVYPEMIAKRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P      E  + ++      + E ++ M      +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGYVAPVAADQDEFAQDLIKTAKETIAEYQKQMDALHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  V  L+S  ++Y D   PW L K    +  S V+    E +R +AIL+   + +   
Sbjct: 421 ALDSVWKLISRANKYIDETTPWTLNKEGKSEELSKVMSNLAESLRLVAILIAPVMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +       + L+         + +   PIFPR 
Sbjct: 481 KMFNQLGLDWNKEAQKKLEFGAFDWDIKVTEKPTPIFPRL 520


>gi|294101616|ref|YP_003553474.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616596|gb|ADE56750.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 643

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 214/513 (41%), Positives = 310/513 (60%), Gaps = 8/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I Y N  PHIGHAY  I ADV+AR+ R+ G  V F TGTDEHGQKI +
Sbjct: 1   MSEKS-FYITTPIYYVNDIPHIGHAYTTIAADVMARYRRMMGDRVFFCTGTDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G+T K   D+   NFR + +VL+IS DDFIRTTE+RH    + ++KK+ D+GDIY
Sbjct: 60  SADAKGMTAKELADRTMENFRRLWEVLNISNDDFIRTTEERHEKVVQGIFKKLMDQGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY +  E Y  +  +    + +       P+Q MEEE YFFR S Y D+LL YY
Sbjct: 120 KGTYEGWYCIPCETYVPESSMK---EDKTCPDCGRPLQKMEEESYFFRASKYSDQLLDYY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E + + I+P  R NE++SFV+SGL+D S+SR +  WGI +P D ++++YVW DAL NYLT
Sbjct: 177 EKNLKAIMPRSRYNEIVSFVRSGLRDQSVSRTSIKWGIPVPGDEKHVVYVWFDALINYLT 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+ + +     FWP+  H++GKDI+RFH + WP  L++  L  P  VF+HG+   +G
Sbjct: 237 ACGYMSDSEKLNI-FWPSVHHLVGKDIIRFHCVIWPIMLIALGLNPPVTVFAHGWWTVEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DP E+ +  GVD  RYF++RE+  G DG + +  +  R+N+DLAN +GN
Sbjct: 296 EKMSKSKGNVVDPFEMADVYGVDPFRYFVLREVPFGLDGDFSEQAMVLRINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R++ M+    DG++P P  F   D+ I ++      ++ E+M       AL  + +L
Sbjct: 356 LLNRTLQMVKNFRDGIVPAPTNFESLDKEIETLLQSTFSQVEESMSCFAYEEALKAIWAL 415

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y D   PW+L K  P +R  TVL+V  E++R   +L+  F+P  A K++  L +
Sbjct: 416 IRRGNKYIDETMPWKLGKEGPQERLDTVLFVLAEMLRGTGLLIAPFMPLTAEKLWGQLGL 475

Query: 480 A--DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               E     +      P        D +FPR 
Sbjct: 476 PGTPEKHGIPAFSFGGFPAGTQTIKGDVLFPRI 508


>gi|239917380|ref|YP_002956938.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414136|ref|ZP_06245878.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838587|gb|ACS30384.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 541

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 248/535 (46%), Positives = 333/535 (62%), Gaps = 27/535 (5%)

Query: 1   MKE-REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + R   Y++TAI+YPN +PHIGHAYE I  D +ARF RLDG DV F TGTDEHGQK+ 
Sbjct: 1   MTDARAPYYLTTAISYPNGEPHIGHAYEYIATDAMARFQRLDGRDVRFLTGTDEHGQKME 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVL-DISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           + AQ  GV+      +N+  F++M D + DISYD FIRTT+  H +  R +W+++   GD
Sbjct: 61  QTAQQQGVSALELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGD 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLL 177
           IY G Y+GWYS+RDE Y+ +DE   G DG     +    V W EEE YFFRLS YQ  LL
Sbjct: 121 IYLGSYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLL 180

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP-----------QY 226
            +Y  HP+F  P  R NEVI FV++GL+DLS+SR +F WGI +P               +
Sbjct: 181 DHYRDHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPEAADADRRADH 240

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           + YVW+DALTNYLT  G+      + A++WPADLHVIGKDI RFH I+WPAFL+SA L L
Sbjct: 241 VTYVWVDALTNYLTGAGWPAGDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLEL 300

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P +V  HGF+ + G K+SKSLGNV+ P E +   G+DA+R+FL+RE   G DG Y  + +
Sbjct: 301 PHRVMIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAV 360

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             R NADLAN +GNL  RS+SM+ K+    +P PG  TE+D ++L+    +L+  R    
Sbjct: 361 VSRKNADLANNLGNLAQRSLSMVAKNCGAAVPEPGELTEADRAVLAQVDALLERSRSAYA 420

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            Q  H AL +   ++ EV+ YF  Q PW L+KT+  R  TVLYVT++ +R++A+L Q  +
Sbjct: 421 VQDFHDALEETWRVLGEVNAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVM 480

Query: 467 PKLANKIFDILFVADE------------NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           P  A+++ D+L V  E             R F +  + L PG  L     P+FPR
Sbjct: 481 PDSASRLLDLLGVPAEGDAGRTGASGSGPRSFAAFHEDLVPGTPLPAP-QPVFPR 534


>gi|150021072|ref|YP_001306426.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793593|gb|ABR31041.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 634

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 215/507 (42%), Positives = 321/507 (63%), Gaps = 3/507 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N++PHIG AY  II D++AR+ RL G DV + TGTDEHGQKI +AA+ 
Sbjct: 2   KKFYLTTPIYYVNSEPHIGSAYTTIIGDIIARYKRLIGYDVFYLTGTDEHGQKIMQAAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  K   D+ S  F  +   L I+ D FIRTT+ +H  T ++   K+ + GDIYKG Y
Sbjct: 62  REIEPKQLCDELSEKFSQLWKDLKITNDYFIRTTDPKHMKTVQLFVSKMLENGDIYKGIY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E Y+N+DE  +             + ++EEE YFFRLS Y + LL +++ +P
Sbjct: 122 KGWYCIPCETYWNEDETEQIEGKHICPTCGRELNFVEEENYFFRLSKYTEPLLKHFKENP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++  ++SGLKDLS++R TFDWGI +P+DP +++YVW+DAL NY++  GY
Sbjct: 182 DFVEPDFRRNEMLKILESGLKDLSITRTTFDWGIPMPNDPNHVIYVWVDALINYISAIGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +      K+WPADLH+IGK+I RFH++ WPA L+S  LPLPKK+F+HG++   G+KIS
Sbjct: 242 -GSDQEKFEKWWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKIFAHGWLTVNGQKIS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDP E +++ G D +RY+L R+I  GKDG + ++ L  R+N+DLAN  GNL+ R
Sbjct: 301 KSLGNAIDPREFVKKYGNDVVRYYLARDIVFGKDGDFSEENLVHRLNSDLANDYGNLLHR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +++M++K++D +IP P    E DE ++     V ++  E M++  +  AL  +   +  +
Sbjct: 361 TIAMVVKNFDSIIPEPNNIQEIDEKLIKEYFEVKEKYLEYMESYKLTNALETIWEYIRYI 420

Query: 425 DRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++YFD  KPW L K  N  R STVLY T+E   ++A LL  F+P  + ++F+ L      
Sbjct: 421 NKYFDENKPWVLAKEGNKGRLSTVLYNTLEAFLKVATLLIPFMPYSSEEVFNRLGQERNF 480

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +    +KP         P+F + 
Sbjct: 481 QKILNEWNTIKPTTKAVH-GKPLFNKI 506


>gi|58336554|ref|YP_193139.1| methionyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58253871|gb|AAV42108.1| met-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 658

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 202/520 (38%), Positives = 317/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K FVD+ + +++ +   L+ISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+++   K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  +  + P P A  +  + +    + V+ + RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    +  S V+    E +R +A++++  + + A 
Sbjct: 421 ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +   +   + L          + +   PIFPR 
Sbjct: 481 KMFEQLGLNWNDEDERKLAFNDFGWNTKVVEKPTPIFPRL 520


>gi|295089976|emb|CBK76083.1| methionyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 661

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 312/514 (60%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 6   KKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAA 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT K FVDQ +   + + D+++ SYD FIRTT+  H +  + ++KK+ D+GDIYKG 
Sbjct: 66  EAGVTPKEFVDQVAGEIKTIWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQGDIYKGY 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PVQ  +EE YFFR+S Y  +L+ Y   H
Sbjct: 126 YEGMYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFFRMSKYAQRLIDYINEH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVSFDPKHVTYVWLDALTNYITGL 241

Query: 243 GYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY           K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L   
Sbjct: 242 GYNCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++   G   + D  + +V    +++  E M    +  A+ ++  +
Sbjct: 362 LVNRTISMTNKYFGGVVEKTGVTEDVDADLKAVVLEAVKKADEKMDRLRVADAITEIFGI 421

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K    +A    VLY   E I   A LL +F+P+ + KI   L 
Sbjct: 422 FRRSNKYIDETTPWALAKDEEKKARLSEVLYNLTEAITIGASLLASFMPETSEKILSQLN 481

Query: 479 VADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
              + R  +S+++  L P G  + +  + +F R 
Sbjct: 482 T--QKRSLESMNEFGLYPSGNKVTEKPEILFARM 513


>gi|283797633|ref|ZP_06346786.1| methionine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074744|gb|EFE12108.1| methionine--tRNA ligase [Clostridium sp. M62/1]
          Length = 661

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 312/514 (60%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 6   KKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKREQGYDVRFQTGTDEHGQKIELKAA 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT K FVDQ +   + + D+++ SYD FIRTT+  H +  + ++KK+ D+GDIYKG 
Sbjct: 66  EAGVTPKEFVDQVAGEIKTIWDLMNTSYDKFIRTTDADHEEQVQKIFKKLYDQGDIYKGY 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PVQ  +EE YFFR+S Y  +L+ Y   H
Sbjct: 126 YEGMYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFFRMSKYAQRLIDYINEH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVSFDPKHVTYVWLDALTNYITGL 241

Query: 243 GYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY           K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L   
Sbjct: 242 GYNCGGENGELFDKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++   G   + D  + +V    +++  E M    +  A+ ++  +
Sbjct: 362 LVNRTISMTNKYFGGVVEKTGVTEDVDADLKAVVLEAVKKADEKMDRLRVADAITEIFGI 421

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K    +A    VLY   E I   A LL +F+P+ + KI   L 
Sbjct: 422 FRRSNKYIDETTPWALAKDEEKKARLSEVLYNLTEAITIGASLLASFMPETSEKILSQLN 481

Query: 479 VADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
              + R  +S+++  L P G  + +  + +F R 
Sbjct: 482 T--QKRSLESMNEFGLYPSGNKVTEKPEILFARM 513


>gi|227903105|ref|ZP_04020910.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227869091|gb|EEJ76512.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 661

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 202/520 (38%), Positives = 317/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 4   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K FVD+ + +++ +   L+ISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 64  KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 124 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 183

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+++   K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 184 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 243

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 244 ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 303

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 304 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD 363

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  +  + P P A  +  + +    + V+ + RE M +    +
Sbjct: 364 LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ 423

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++Y D   PW L K    +  S V+    E +R +A++++  + + A 
Sbjct: 424 ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP 483

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +   +   + L          + +   PIFPR 
Sbjct: 484 KMFEQLGLNWNDEDERKLAFNDFGWNTKVVEKPTPIFPRL 523


>gi|225575677|ref|ZP_03784287.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037134|gb|EEG47380.1| hypothetical protein RUMHYD_03770 [Blautia hydrogenotrophica DSM
           10507]
          Length = 660

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 210/512 (41%), Positives = 310/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI+TAIAY + +PHIG+ YE ++AD +ARF R +G DV F TGTDEHGQKI   AQ
Sbjct: 13  KEKYYITTAIAYTSGKPHIGNTYEAVLADAIARFKRQEGYDVFFQTGTDEHGQKIEMKAQ 72

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG 
Sbjct: 73  EAGVTPQKFVDGVASQIKSIWDLMNTSYDKFIRTTDDYHERQVQKIFKKLYEQGDIYKGH 132

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G           PV   +EE YFFR+S Y D+L+ +  +H
Sbjct: 133 YEGMYCTPCESFFTESQLVDGK----CPDCGRPVTPAKEEAYFFRMSKYADRLIEHINTH 188

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP +++YVW+DALTNY+T  
Sbjct: 189 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWLDALTNYITGI 248

Query: 243 GYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L   
Sbjct: 249 GYDCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLLQGD 308

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN +GN
Sbjct: 309 GKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLGN 368

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G++   G     DE++ +    V +++   M    +  A+ +V SL
Sbjct: 369 LVNRTISMSNKYFGGVVADKGVAEPVDEALKAFVLEVPKKVVAKMDELRVADAMTEVFSL 428

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY  VE I   A LLQ+F+P    +I   L 
Sbjct: 429 FKRCNKYIDETMPWALAKDESKQDRLATVLYNLVEGICIGATLLQSFMPDTTGRILGQLN 488

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + +            G  +    + +F R 
Sbjct: 489 AKERSMDDLKNFGLYPSGNKVTDKPEILFARL 520


>gi|163839798|ref|YP_001624203.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953274|gb|ABY22789.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 529

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 257/512 (50%), Positives = 354/512 (69%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +   Y++TAI YPN  PHIGHAYE + AD LARF RLDG DV + +GTDEHG K+ +A
Sbjct: 5   SNKRPYYLTTAITYPNGVPHIGHAYEYVSADALARFKRLDGFDVFYMSGTDEHGIKVQQA 64

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT    VD+NS   R + D+++ SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 65  AEKEGVTPLELVDRNSAAIRAVHDLVESSYDRFIRTTEPEHYLASQELWRRMEANGDIYL 124

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYY-NAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY D++    ADG  Y       V W EEE YFFRLS YQ+KLL+ Y
Sbjct: 125 DKYTGWYSVRDEAYYTDEQTELRADGIRYAIETETEVTWTEEESYFFRLSNYQEKLLALY 184

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+ PEF  P  R NEVISFVKSGL+DLS+SR +F+WG+ +P + +++MYVW+DALTNYLT
Sbjct: 185 EAQPEFAAPQYRFNEVISFVKSGLQDLSISRTSFNWGVPVPGNDKHVMYVWVDALTNYLT 244

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+ D    S+ K+WPAD+H+IGKDI RFHAI+WP FL+SA LPLPK+V  HGF+ + G
Sbjct: 245 GAGFPDESS-SQWKYWPADVHIIGKDISRFHAIFWPGFLMSAGLPLPKRVMIHGFLFNNG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+ P + +   GVDA+R+F +RE++ G+DG Y  + +  R N+DLAN +GN
Sbjct: 304 VKMSKSFGNVVAPADWVAAYGVDAVRFFFLREVSYGQDGNYSHEAIISRKNSDLANNLGN 363

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SM+ K+ DG++PTPG F+ +D++IL+    +L   R + + Q  HRAL  + ++
Sbjct: 364 LAQRSLSMVAKNCDGVVPTPGEFSSADQAILAKAQALLAANRASYEVQEFHRALEAIWAV 423

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV- 479
           + + + YF  Q PW L+KT+P+R +TVLYVT+EV+R +A+L+Q  +P  A K+ D+L V 
Sbjct: 424 LGDTNAYFADQAPWVLRKTDPERMATVLYVTLEVLRIVALLIQPVMPGSAAKLLDVLGVS 483

Query: 480 -ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            A+  R F +++  L  G  L     PIFPR+
Sbjct: 484 AAEGARDFTAVETPLVAGTALPAP-SPIFPRY 514


>gi|317120932|ref|YP_004100935.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315590912|gb|ADU50208.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 677

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 224/515 (43%), Positives = 310/515 (60%), Gaps = 12/515 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R + YI+T I YPN + HIGH Y  + AD LAR+HRL G D  F TGTDEHGQKI +A
Sbjct: 6   EARGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDDTWFLTGTDEHGQKIERA 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG     ++D      + +   L ISYDDFIRT+E RH    + +++++ ++GDIYK
Sbjct: 66  ARKAGKEPLEYIDPIVEATKQLWHRLHISYDDFIRTSEPRHEQRVQQIFQRLYEQGDIYK 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G Y    EAYY + E+    DGQ       PV+ ++EE YFFRLS Y   LL + E
Sbjct: 126 GVYEGLYCTACEAYYTEAEL---LDGQRCPVHETPVERLQEESYFFRLSKYAQPLLEHIE 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +PEFI P  RRNEV++F++ GL+DLS+SR +F WGI +P DP +++YVWIDAL NY+T 
Sbjct: 183 RNPEFIQPPSRRNEVVAFIRQGLQDLSVSRTSFRWGIPVPFDPDHVIYVWIDALANYITA 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D       +FWPADLH+IGKDILRFHAI WPA L++   PLP+ V+ HG++L  G 
Sbjct: 243 LGWPDGERYR--RFWPADLHLIGKDILRFHAIIWPALLMALGEPLPRCVYGHGWLLIDGG 300

Query: 302 KISKSL--GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           KI KS   G VIDP+++IE+ GVD +RYFL+RE+  G DG Y +D L +R+N DLAN +G
Sbjct: 301 KIGKSRAGGQVIDPVQLIEKYGVDPVRYFLLREVPFGDDGSYSEDALVRRLNTDLANDLG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL  R+  MI +  DG IP P     SD  + +     +  +   M    +  AL  +  
Sbjct: 361 NLAWRTTGMIQRFLDGRIPEP-PGAASDGVLAAAARETVARVERAMAGFDLPAALQAIWD 419

Query: 420 LVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L+   ++Y D Q PW L++    DR   VLY   E  R + +LL  F+ +   +++  L 
Sbjct: 420 LIGRANKYIDEQAPWALRREGRRDRLEAVLYDVAETARVVGVLLSPFLVETPPRLWTQLG 479

Query: 479 VADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510
           +  + R     + L+    PG +      P+FPR 
Sbjct: 480 LGPDYRPAGWREGLEWGQLPGGVRVVRDQPLFPRI 514


>gi|220932862|ref|YP_002509770.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219994172|gb|ACL70775.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 653

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 223/516 (43%), Positives = 322/516 (62%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   Y++T I YP+ + HIGHAY  + AD LA+F  +   D +F TG+DEHGQKI +
Sbjct: 1   MSEK-TFYVTTPIYYPSDRLHIGHAYTTVAADTLAKFKEMQDYDTMFLTGSDEHGQKIER 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG     +VD+    F+D+   L + YD FIRTT   H    + ++KKI +KGDIY
Sbjct: 60  KASEAGKKPGEYVDEIVATFKDLWKRLGVDYDYFIRTTNPDHEKVVQEIFKKIYEKGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E ++ + ++              PV+W+EEE YFF+LS Y D+LL + 
Sbjct: 120 KGKYEGWYCTPCETFWTERQLEGEK---VCPDCGRPVEWVEEESYFFKLSKYADRLLEHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HPEFI P  RR E+I+F++SGL+DLS+SR TFDWGI +P D  +++YVW DAL+NY++
Sbjct: 177 KKHPEFIQPESRRKEMINFIESGLEDLSVSRTTFDWGIPVPIDDDHVIYVWFDALSNYIS 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL +       +WPAD+H++GKDILRFH I WP  L++ +LPLPKKVF HG++L + 
Sbjct: 237 AIGYLSDDK-KFNHYWPADVHIVGKDILRFHTIIWPIILMALDLPLPKKVFGHGWLLTET 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP ++I++ GVD +RY+L+RE+A G+DG Y  + L KR+N+DLAN +GN
Sbjct: 296 GKMSKSKGNVVDPNKLIDDFGVDPIRYYLLREVAFGQDGTYSTEALIKRINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R+V+M+ K +DG+IP PG   E D+ + +   + L EI  +M N     AL  + + 
Sbjct: 356 LLHRTVTMVDKYFDGVIPEPGVEKEVDKDLKNYALKTLDEIDNSMDNLKYAVALESLWNF 415

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L +     DR  TVLY  +E +R +A +L+ F+ +    I + + 
Sbjct: 416 IRRSNKYIDQTTPWILARDEDKKDRLGTVLYNLIEALRIIAGMLKPFLVETPYMIGEQIN 475

Query: 479 VAD--ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             D  E   +  L Q   L PG  + K   PI+PR 
Sbjct: 476 ARDLIEKASWSDLKQWGLLSPGRKV-KKGKPIYPRI 510


>gi|299471948|emb|CBN79628.1| Methionyl-tRNA synthetase [Ectocarpus siliculosus]
          Length = 613

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 239/540 (44%), Positives = 335/540 (62%), Gaps = 37/540 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE    Y++T I Y N +PHIGHAY  +  DV+ARF RLDG +V+F TGTDEHGQK+  +
Sbjct: 71  KEMPPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEAS 130

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A  + + F D+ S+ FRD+   ++ S D FIRTT+  H      LW ++ ++G I  
Sbjct: 131 ALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISL 190

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-EEGYFFRLSAYQDKLLSYY 180
           G Y+GWYS+RDEA+Y + E+  G            V+W+E E  YFF+LS +Q  LL +Y
Sbjct: 191 GVYAGWYSVRDEAFYGEAELVDGK-----APSGAEVEWVEKEPSYFFKLSEWQQPLLDFY 245

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P+FI P  RRNE +SFV  GL+DLS+SR +F WG+ +P D +++MYVW+DAL NY++
Sbjct: 246 AENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYIS 305

Query: 241 TTGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             G+ +    G  +KFWPADLHVIGKDILRFH++YWPA LL+A L  PK++F HG+    
Sbjct: 306 ALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKD 365

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+KISKS GNVIDP++++   GVDA RYFL+ E+  G DG + +   + RVN++LAN +G
Sbjct: 366 GQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVG 425

Query: 360 NLVSRSVSMILKDYDGMIPTPG---------------------AFTESDESILSVCSRVL 398
           NL  R++SM +K+  G +P P                        T  D+ +L      L
Sbjct: 426 NLAMRTLSMAVKNCGGQVPRPAAAADAGDVDEGGDKALGREDFDLTPEDKELLKSAGECL 485

Query: 399 QEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             +R  + + Q +H+AL  ++ +  + +RY D Q PW+LKKT+PDR  TVL+V +E IR 
Sbjct: 486 GVVRPLVGETQQLHKALEAILLVSRDANRYVDFQAPWKLKKTDPDRMKTVLWVLLETIRH 545

Query: 458 LAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR------LKPGFMLHKTFDPIFPRF 510
           + IL Q FVP+ A K+ D L V + + R F +LDQ       L+PG  L K   P+FPR 
Sbjct: 546 VGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQGGGGRFSLQPGVPLDKPV-PVFPRI 604


>gi|302390850|ref|YP_003826670.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202927|gb|ADL11605.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 644

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 204/513 (39%), Positives = 323/513 (62%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YPN + HIGH Y    AD + +F  L G +    TG+DEHGQK+ K A
Sbjct: 2   TKDTFYVTTPIYYPNDKLHIGHTYTTTAADTVVKFKELQGYETELITGSDEHGQKLQKTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+    ++D   + F+++   L++ Y +F+RTT + H    + ++KKI DKGDIYK 
Sbjct: 62  EEHGMEPLGYIDGIVKTFKELWSTLEVDYTEFVRTTSQEHKKDVQHIFKKIYDKGDIYKD 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E Y+ + E+ +  +       + PV+W+EEE YFF++S Y+++LL + + 
Sbjct: 122 KYEGYYCTPCETYWAERELDEEGN---CPDCNRPVEWVEEESYFFKMSEYEEQLLEFLDD 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P +RRNE+I+F++ GL+DL +SR +FDWGI +P D  +++YVW DAL +YLT  
Sbjct: 179 NPDFIQPAKRRNEMINFIEEGLEDLCVSRTSFDWGIPVPIDGDHVIYVWFDALISYLTGI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+  + D     +WPAD+H++GKDILRFH I WPA L++A++ LPK+VF HGF+  +G K
Sbjct: 239 GFRRDED-KFGSYWPADVHIVGKDILRFHTIIWPAILMAADMELPKQVFGHGFLTVEGGK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP +++ + GVDA+RY+L+RE+A G DG Y  +   +R+N+DLAN +GNL+
Sbjct: 298 MSKSKGNVVDPTKLVNDFGVDAVRYYLMREVAFGTDGSYSTESFIRRINSDLANDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+V+M+ + +DG+IP P + TE D  +     + L  + ++M+N     AL  + +++ 
Sbjct: 358 NRTVAMVEQYFDGVIPEPRSETEYDADLKKTSQQELAAMADDMENLQFSTALEHLWTVIR 417

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     D+  TVLY  +E +R  AI L+ F+P+   KI+  + + 
Sbjct: 418 RTNKYIDQTTPWILAKDEDKQDKLGTVLYNLLEALRITAIALKPFLPEAPAKIWQQIGIK 477

Query: 481 ---DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              D+ R  +  +  L    +     DPIFPR 
Sbjct: 478 ADLDQQRWSEVEEWGLLEAGLEVNPGDPIFPRI 510


>gi|313672884|ref|YP_004050995.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939640|gb|ADR18832.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 636

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 216/514 (42%), Positives = 324/514 (63%), Gaps = 11/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I Y N  PHIGHAY  + ADV++R+ RL G DV F TGTDEHGQKI  AA
Sbjct: 2   NKPTFYVTTPIYYVNDVPHIGHAYTTVAADVISRYKRLSGYDVFFLTGTDEHGQKIEMAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T K   D+    F+++   L+ISYD FIRTT+  H  + + ++KK+ D GDIY+G
Sbjct: 62  EKQGITPKQLADKVVERFKNLWIKLNISYDKFIRTTDDYHKKSVQYIFKKMMDNGDIYQG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E Y+ + ++    DG    +       ++E  YFF++S YQD LL + E 
Sbjct: 122 EYEGWYCTPCETYWTETQLL---DGNCCPSCRRETTRLKEPSYFFKMSKYQDALLKHIEE 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+ISF+K GL+DLS+SR +F WG+++PDDP++++YVWIDALTNY++  
Sbjct: 179 NPDFIKPASRRNEIISFIKEGLRDLSVSRVSFKWGVQVPDDPKHVIYVWIDALTNYISAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY +  D    K+WPAD H++GKDILRFH +YWP  L+S  +PLPK VF+HG+   +G+K
Sbjct: 239 GYPNEDD-LFGKYWPADFHIVGKDILRFHTVYWPTMLMSIGVPLPKSVFAHGWWTVEGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN IDP  ++++ GVD +RYFL+RE+  G DG +    L  R+N DL+N +GNL+
Sbjct: 298 MSKSLGNAIDPNWLVDKFGVDQIRYFLMREVPFGLDGDFSFKALIHRINGDLSNDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M+ + +DG++         D+ I  +     +E+ +N+Q+   ++AL  +  LVS
Sbjct: 358 NRTLGMLNRYFDGVVQPYVVGDPEDDRIAELIVSTFKEMDKNLQDLAFNKALGTIWELVS 417

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++++ D   PW L K     DR  +VLYV ++ IR L+++L  F+P  A ++   L   
Sbjct: 418 ALNKFIDTMAPWNLAKDPSKRDRLGSVLYVVLDGIRALSLMLYPFMPNTAIEMRRQLNTK 477

Query: 481 DE--NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            E     F+ L +   L+ G  + +    +FPR 
Sbjct: 478 REIYKSTFEELCKVRVLESGQKIGE-VKQLFPRI 510


>gi|295692078|ref|YP_003600688.1| methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030184|emb|CBL49663.1| Methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 658

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 205/520 (39%), Positives = 316/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   L+ISYD FIRTT+++H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLNISYDKFIRTTDEQHVQAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  DG     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDDGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HP+FILP  R  E+++   K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    GVD LRY+L+R +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGDDGIFTPEDFVERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +     +   P A  E  + +    + V+ + RENM +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQAGHVDAVPVAQAEFGKDLQDTAASVINDYRENMNSLHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LVS  ++Y D   PW L K    +  S V+    E +R +AI+++  + + A 
Sbjct: 421 ALDNIWKLVSRANKYIDETTPWALNKEGKKEELSKVMSNLAESLRLIAIMIEPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            +F  L +  +N   + L          + +   PIFPR 
Sbjct: 481 IMFKQLGLNWDNEDAKHLAFGDFDWDVKVIEKPQPIFPRL 520


>gi|291556883|emb|CBL34000.1| methionyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 642

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/511 (37%), Positives = 296/511 (57%), Gaps = 11/511 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I YP+  PHIGH Y  +  D +ARF R+ G DV+F TGTDEHGQKI   A  
Sbjct: 3   KTYYLTTPIYYPSGNPHIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT K +VD+   NF+ + + + ISYD FIRTT+  H +T + ++KK+ +KG IYKG Y
Sbjct: 63  KGVTPKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFKKLYEKGYIYKGTY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E+++ + ++  G            V+   EE YF RLS + DK+  +     
Sbjct: 123 KGKYCTPCESFWTESQLVDGK----CPDCGREVKEANEEAYFLRLSDFADKIEKFLTETD 178

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
               P  R NE+++   K GL+DL +SR +F WGI +  D ++++YVW+DAL+NY++  G
Sbjct: 179 YL-QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDALSNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +       K+WPAD+H+  K+I+RFH+I WP  L+  +LPLPK ++ HG+I   G+K+
Sbjct: 238 YGNEKYNDFEKYWPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHLYGHGWINFNGDKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  + E  GVDA+RY ++R++  G D  +  + +  R+NADLAN +GNLVS
Sbjct: 298 SKSKGNVVDPFVLCERYGVDAVRYQILRDMPYGSDCNFTNELMLTRINADLANDLGNLVS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+M  K + G +PT     E D+ ++ +   +   +   ++     +AL ++  ++S 
Sbjct: 358 RTVAMADKYFGGTLPTDRVSDELDDQLIGMAQSLCDTVTPLIEQAQHSKALEEIFKVISR 417

Query: 424 VDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K      R +TVLY  +E IR  + LL  F+P    ++++ +    
Sbjct: 418 ANKYIDETAPWVLAKDESNNARLATVLYNLLETIRICSALLSPFMPATMPEVWEQIGAGA 477

Query: 482 ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           E+  F  L     L+    + K    +FPR 
Sbjct: 478 EDTAFDKLGTFGVLRADVTV-KKGRVLFPRI 507


>gi|227522370|ref|ZP_03952419.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227090428|gb|EEI25740.1| methionine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 675

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 206/519 (39%), Positives = 314/519 (60%), Gaps = 12/519 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D +AR+ R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGRLHIGNSYTTIACDAVARYKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + +VD+ ++  +++   L+IS   FIRTT+  H      +++++ D+GDIY 
Sbjct: 63  ADKLGMAPQAYVDKMAKGIKELWKKLEISNTKFIRTTDDYHEKAVADIFQQLQDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDDDGKVIGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           L  YY+ HP+FI P  R NE+I +F+  GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LRQYYQDHPDFIQPSTRMNEMIKNFIDPGLEDLAVSRTTFHWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+NY+T  GY    D    K+WPAD+ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LSNYITALGYDGKDDSDFKKYWPADVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    RVN DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLMDRYGLDALRYYLLRAMPYANDGIFTPEDFVDRVNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G+IP   A   E+D+ +  V    +   +++M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYEGGIIPGFKAGVNEADKELEEVSKESIVSFKKSMDDLHFSEA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L++V  LVS+ ++Y D  +PW L K   + ++ ++V+      +R +A L+   +     
Sbjct: 423 LSEVWKLVSQSNKYIDQTEPWVLAKNDADKEKLASVMSHLAASLRVIAELISPIMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           +IF  L + DE    ++LD   L  G        PIFPR
Sbjct: 483 EIFQQLGL-DEAIDIKNLDISDLPTGAKTVAKGTPIFPR 520


>gi|116492070|ref|YP_803805.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102220|gb|ABJ67363.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 673

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 208/523 (39%), Positives = 317/523 (60%), Gaps = 13/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I YP+ + HIG++Y  I  D  ARF RL+G DV F TGTDEHG KI +
Sbjct: 1   MAENNTYYITTPIYYPSGKLHIGNSYTTIACDAEARFQRLEGKDVFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T K +VD  + + + + D+L+I+ D FIRTT+  H    + +++K+ D+GDIY
Sbjct: 61  KAEALNTTPKAYVDGMAEDIKKLWDLLEITNDKFIRTTDDYHEKAVQKIFQKLLDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVY+ ADG     +    N V+ ++EE YFF++S Y D
Sbjct: 121 LGEYEGWYSVSDEEYFTESQLAEVYRDADGNVTGGKAPSGNEVELVKEESYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HP FI P  R NE+I+   K GL+DL+++R  F WG+ I +DP++++YVWID
Sbjct: 181 WLLDYYQTHPNFIQPASRMNEMINNFIKPGLEDLAVTRTGFKWGVPIKNDPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + DG+  KFWPA++H++GK+I+RFH IYWP  L +  L  P +++ H
Sbjct: 241 ALSNYITALGYSSDEDGNFKKFWPANVHMVGKEIVRFHTIYWPIMLHALGLEQPDQIYGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNVI P  +++  G+DALRY+L++ +  G DG +  +    ++N D
Sbjct: 301 GWLLMKDSKMSKSKGNVIYPETIVKNYGLDALRYYLLKAMPYGNDGNFTPEDFISKINFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G+IPT      + D  + +  +  ++   + M N     
Sbjct: 361 LANDLGNLLNRTVAMINKYEGGVIPTFQSGVNDVDVDLETTAATTIKNYEDLMNNLHFAD 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPK 468
           ALA++  LV+  ++Y D   PW L + + D    + ++V+    E +R +AIL+Q  + +
Sbjct: 421 ALAEIWKLVARTNKYIDETTPWILARNDDDESKQKLASVMNHLAESLRVIAILIQPMMTQ 480

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
              KIF  L +       Q L    +     + +   PIFPR 
Sbjct: 481 SPAKIFAQLGLDVNQLELQGLKFGEIPADTKVVEKGTPIFPRL 523


>gi|228476230|ref|ZP_04060933.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269715|gb|EEK11214.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 658

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 325/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + +   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIAGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+++P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDANPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + D    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDDSLFQKYWPADVHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEALALETVKNFHDNMESFQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L+S  ++Y D   PW L K    +     V+   VE IR   +LL+ F+     +I
Sbjct: 423 TVWKLISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFLTHAPKEI 482

Query: 474 FDILFVADENR-CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           F  L + + +     SL+    L+   M+ +   PIFPR 
Sbjct: 483 FKQLNINNSDLYELSSLEHYGALQEPIMVTEKPSPIFPRL 522


>gi|238927712|ref|ZP_04659472.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884428|gb|EEQ48066.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 516

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 220/515 (42%), Positives = 326/515 (63%), Gaps = 9/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I YP+A+ HIGHAY   +AD +AR+ RL G DV F TG+DEHGQKI +
Sbjct: 1   MSGKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T   +VD+   +F+++  +L ISYDDFIRTT+ RH++  + ++++I D+GDIY
Sbjct: 61  AAEKEGITPIQYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   ++    +       H PVQ + EE YFFR+S Y D+LL+Y 
Sbjct: 121 KGEYKGLYCTPCESYWTRLQLD---ENGCCPDCHRPVQEVSEEAYFFRMSKYADRLLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL + +    K+WPAD+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYLHDKEM-FHKYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ +IEE G DA+RYFL+REIA G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPVALIEEFGADAIRYFLLREIALGQDGNISRDALIGRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G++      T+ D ++ ++ +  +++  E M    +  A+  V +L
Sbjct: 357 LLHRTLSMAKKYRKGVVTKGEGRTDFDAALETMTAATVRDYTEQMDAMELSAAVKTVWAL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D   PW L K     A    VLY  VE +  +++L+  F+P  A +I   L 
Sbjct: 417 ISRTNKYIDETAPWTLAKDEAKAAQLDAVLYHLVETLHIVSVLIAPFMPTTARRIHKQLG 476

Query: 479 VADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510
              +    Q  D       P      T + +FPR 
Sbjct: 477 FHADFDGVQLADIAAWGTTPDGHTVGTAEQLFPRI 511


>gi|291530000|emb|CBK95585.1| methionyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 642

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/511 (37%), Positives = 296/511 (57%), Gaps = 11/511 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I YP+  PHIGH Y  +  D +ARF R+ G DV+F TGTDEHGQKI   A  
Sbjct: 3   KTYYLTTPIYYPSGNPHIGHCYTTVACDTIARFKRMQGYDVMFLTGTDEHGQKIELKAAE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT K +VD+   NF+ + + + ISYD FIRTT+  H +T + +++K+ +KG IYKG Y
Sbjct: 63  KGVTPKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFRKLYEKGYIYKGTY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E+++ + ++  G            V+   EE YF RLS + DK+  +     
Sbjct: 123 KGKYCTPCESFWTESQLVDGK----CPDCGREVKEANEEAYFLRLSDFADKIEKFLTETD 178

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
               P  R NE+++   K GL+DL +SR +F WGI +  D ++++YVW+DAL+NY++  G
Sbjct: 179 YL-QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGIPVDFDSKHVVYVWVDALSNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +       K+WPAD+H+  K+I+RFH+I WP  L+  +LPLPK ++ HG+I   G+K+
Sbjct: 238 YGNEKYNDFEKYWPADMHMTAKEIVRFHSIVWPIILMMLDLPLPKHLYGHGWINFNGDKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  + E  GVDA+RY ++R++  G D  +  + +  R+NADLAN +GNLVS
Sbjct: 298 SKSKGNVVDPFVLCERYGVDAVRYQILRDMPYGSDCNFTNELMLTRINADLANDLGNLVS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V+M  K + G +PT  A  E D  ++ +   +   +   ++     +AL ++  ++S 
Sbjct: 358 RTVAMADKYFGGTLPTDRASDELDNQLIGMAQSLCDTVTPLIEQAQHSKALEEIFKVISR 417

Query: 424 VDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K      R +TVLY  +E IR  + LL  F+P    ++++ +    
Sbjct: 418 ANKYIDETAPWVLAKDESNNARLATVLYNLLETIRICSALLSPFMPATMPEVWEQIGAGA 477

Query: 482 ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           E+  F  L     L+    + K    +FPR 
Sbjct: 478 EDTAFDKLGTFGVLRADVTV-KKGRVLFPRI 507


>gi|197302731|ref|ZP_03167785.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
           29176]
 gi|197298313|gb|EDY32859.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
           29176]
          Length = 677

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 208/515 (40%), Positives = 315/515 (61%), Gaps = 26/515 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 46  MSEKPKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 105

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD+ S   + + D++D SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 106 KAEEAGITPKEFVDKVSGEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G           PVQ  +EE YFF++S Y D+L+ + 
Sbjct: 166 KGHYEGMYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFFKMSKYADRLIEHI 221

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 222 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 281

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY    + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 282 TGIGYDAEGNSTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 341

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 342 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 401

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G +   G   E D  + +V     + + E M++  +  A+ ++
Sbjct: 402 LGNLVNRTISMTNKYFGGTVTDTGVAEEVDADLKAVVENTAKAVAEKMKDLRVADAITEI 461

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR STVL+  ++ I + A LL+ ++P  + KI +
Sbjct: 462 FNLFKRCNKYIDETTPWVLGKDESKKDRLSTVLWNLIQGISEGARLLEPYMPSTSKKILE 521

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                     + +  + +F R 
Sbjct: 522 QLG-----------------NGHVTEKPEILFQRM 539


>gi|331701956|ref|YP_004398915.1| methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129299|gb|AEB73852.1| Methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 675

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 203/518 (39%), Positives = 309/518 (59%), Gaps = 10/518 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   YI+T I YP+ + HIG++Y  I  D  ARF R  G DV F TGTDEHG KI + 
Sbjct: 3   ESKPTFYITTPIYYPSGKLHIGNSYTTIACDAEARFKRAMGYDVFFLTGTDEHGLKIEQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ K +VDQ + + + +   L+IS   FIRTT+  H      +++K+ D GDIY 
Sbjct: 63  AEQLGMSPKDYVDQMAASIKQLWKKLEISNTKFIRTTDDYHEKAVADIFQKLLDNGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y+GWYS+ DE Y+ +    EVY+  +G+    +    + VQ + E+ YFF++S Y D 
Sbjct: 123 GEYTGWYSVSDEEYFTESQLAEVYRDKNGKVTGGKAPSGHEVQLVHEQSYFFKMSKYADW 182

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YY+ +P FI P  R NE+I +F++ GL+DL++SR TF WG+ +  DP++++YVWIDA
Sbjct: 183 LLRYYKDNPNFIQPATRMNEMIKNFIEPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           LTNY+T  GY    D +  K+WPA++ ++GK+I+RFH IYWP  L +  LPLPK V+ HG
Sbjct: 243 LTNYITALGYDGKDDSNFKKYWPANVQMVGKEIVRFHTIYWPIILHALGLPLPKTVYGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNVI P  +++  G+DALRY+L+R +    DG +  +    R+N DL
Sbjct: 303 WLLMKDGKMSKSKGNVIYPETLVDRYGLDALRYYLLRAMPYANDGLFTPEDFIDRLNFDL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSMI K   G++P   A   E+D+ +    + V+   ++ M +     A
Sbjct: 363 ANDLGNLLNRTVSMINKYDGGILPAYKAGVNEADKELEETAATVIANYKQLMNDLHFSDA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA+   LVS+ ++Y D  +PW L K   + D+   V+      +R +A L+   +     
Sbjct: 423 LAETWKLVSQTNKYIDQTEPWNLAKNPDDKDKLDAVMAHLAAGLRVIAELISPVMTHAPK 482

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +IF  L + ++        + +  G        PIFPR
Sbjct: 483 EIFAQLGITEDIDLEDLKFEDVPAGVKAVAKGTPIFPR 520


>gi|15672774|ref|NP_266948.1| methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|25009394|sp|Q9CHE0|SYM_LACLA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12723712|gb|AAK04890.1|AE006312_10 methyonyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 662

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 210/519 (40%), Positives = 316/519 (60%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +     ++++ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +E+++   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+ HP+FI P  R+NE+++   K GL+DL+L+R +F WGI +P +P++++YVW D
Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D +  K+WP  ++++GK+I+RFH IYWP  L +  LP PKK+F+H
Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWP-GINMVGKEIVRFHTIYWPIMLHALGLPAPKKIFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A    VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + + +   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518


>gi|260437842|ref|ZP_05791658.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809867|gb|EFF69072.1| methionine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 655

 Score =  455 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 206/513 (40%), Positives = 313/513 (61%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R+ G DV F TGTDEHGQKI   A
Sbjct: 2   EKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRMQGYDVRFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K FVD  +   + + D+++ SYD FIRTT++ H    + ++KK+ DKGDIYKG
Sbjct: 62  AEAGVTPKQFVDNVAGEIKRIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            V+  +EE YFF++S Y D+L+ Y   
Sbjct: 122 HYEGMYCTPCESFWTESQLVDGK----CPDCGRKVKPAKEEAYFFKMSKYADRLIDYINE 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDRHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + D      K+WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 LGYDCDGDNDELFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNVI   ++ +  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 GDKMSKSKGNVIYADDMADMFGVDAVRYFVLHEMPFENDGVITWELVVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   E D+ + +     ++++   M +  +  A+ +  +
Sbjct: 358 NLVNRTISMSNKYFGGVVTDKGVTAEVDDDLKNTILEAVKKVDAKMNDLRVADAITETFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +    ++Y D   PW L K     DR STVLY  VE I   A LL+ F+P+   KI   L
Sbjct: 418 IFKRCNKYIDETMPWALAKDETQADRLSTVLYNLVEGISIGAALLEPFMPETTAKIRKQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              +      +       G  +  + + +F R 
Sbjct: 478 NAPELTLEDLTKFGNYVSGTKVTDSPEILFARL 510


>gi|260102231|ref|ZP_05752468.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083972|gb|EEW68092.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328463921|gb|EGF35439.1| methionyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 658

 Score =  455 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 202/520 (38%), Positives = 315/520 (60%), Gaps = 10/520 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ +  IG+AY  I AD +AR+ R  G D  F TGTDEHG KI +
Sbjct: 1   MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGYDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD+ + +++ +   LDISYD FIRTT++ H    + +++K+  KGDIY
Sbjct: 61  KAEAQGIKPQEFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE Y+ +    EVYK  +G     +    + V+ ++E  YFF++S Y D
Sbjct: 121 LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ YY+ HPEFILP  R  E+++   K GL+DLS++R T +WGI +P DP++++YVWID
Sbjct: 181 RLVEYYKEHPEFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  + D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK +  H
Sbjct: 241 ALSNYITALGYGSDHDELFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  +    G+D LRY+L+  +  G DG +  +   +R+N D
Sbjct: 301 GWVLMKNGKMSKSKGNAVYPESLTSRYGIDPLRYYLMHALPFGADGIFTPEDFIERINYD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+VSMI +  D  + P P    +  + +    + V+ + RE M +    +
Sbjct: 361 LANDLGNLLNRTVSMINQYQDGQVAPVPVTQDKFGKDLQDTAASVIADYREQMDSLHFSQ 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  LV+  ++  D   PW L K    D  S V+    E +R +AI++   + + A 
Sbjct: 421 ALDSIWKLVARANKCIDETTPWVLNKEGKKDELSHVMSNLAESLRLIAIMIYPVMTETAP 480

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           K+F+ L +  ++   ++L          + +   PIFPR 
Sbjct: 481 KMFEQLGLNWDDEDQKNLAFNDFGWNTKVVEKPKPIFPRL 520


>gi|326406343|gb|ADZ63414.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 662

 Score =  455 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 210/519 (40%), Positives = 316/519 (60%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +     ++++ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +E+++   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+ HP+FI P  R+NE+++   K GL+DL+L+R +F WGI +P +P++++YVW D
Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D +  K+WP  ++++GK+I+RFH IYWP  L +  LP PKK+F+H
Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWP-GINMVGKEIVRFHTIYWPIMLHALGLPAPKKIFAH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A    VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + + +   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518


>gi|239637476|ref|ZP_04678450.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596921|gb|EEQ79444.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 656

 Score =  455 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 319/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     + + D L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF +  Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVEPVYENGKIVGGKSPDSGHEVELVKEESYFFNIKKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +F+WG+ +P +P++++YVWIDAL 
Sbjct: 183 EFYDQNPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVSVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDLYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++E  ENM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFQGELPAYQGPKHELDEDMEAMALETVKEFHENMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D   PW L K    +     V+   VE IR   +LL+ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETTPWVLAKDESQKDMLGNVMAHLVENIRFATVLLRPFITHAPKEI 482

Query: 474 FDILFVAD-ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F  L + + E   F SL     L     +     PIFPR 
Sbjct: 483 FKQLNINNPELMEFSSLATYGSLTEPITVITKPTPIFPRL 522


>gi|331087261|ref|ZP_08336331.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408947|gb|EGG88408.1| hypothetical protein HMPREF0987_02634 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 632

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 209/513 (40%), Positives = 311/513 (60%), Gaps = 26/513 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AGVT K FVD  +   +++AD+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 62  QEAGVTPKEFVDGVAAQVKEIADLMNTSYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++ + ++  G            VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 122 YYEGMYCTPCEAFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGENSEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   E D  + +V  R    + E M    +  A+ ++ +
Sbjct: 358 NLVNRTISMTNKYFGGIVTDKGIAEEVDAELKAVVERTPGAVDEKMDKLRVADAITEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY  +  I + A LL +F+P+ + KI   L
Sbjct: 418 LFKRCNKYIDETMPWALAKEEDKKDRLETVLYNLITSISKGAELLSSFMPETSEKILAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                             G  +    + +F R 
Sbjct: 478 N-----------------GGHVTDKPEILFQRL 493


>gi|217966690|ref|YP_002352196.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217335789|gb|ACK41582.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 634

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 233/507 (45%), Positives = 328/507 (64%), Gaps = 7/507 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI+T I Y N++PHIG  Y  I+AD  ARF+RL   DV F TG DEHGQK+A+ AQ
Sbjct: 9   RNKFYITTPIYYSNSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQ 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + +VD  ++ F +  + + I+ DDFIRTTEKRH +  + +++K+ DKG +YKG 
Sbjct: 69  ERGYTPQEYVDLMAQKFIETWEKIGITNDDFIRTTEKRHEEVVQKVFQKLYDKGYLYKGS 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWY    E ++  +E++ G       A   PV+W+EEE Y+F+LSA+ + LL Y E H
Sbjct: 129 YAGWYCTPCETFWQKEELHDGN----CPACGRPVEWLEEETYYFKLSAFAEPLLKYIEEH 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RRNEVISF+KSGLKD+S +R T  WGI +P DP++ +YVW DAL NY++  G
Sbjct: 185 PEFVYPETRRNEVISFIKSGLKDISATRTTVKWGIPVPFDPKHTVYVWFDALVNYISALG 244

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL + D    ++WPAD+H+IGKDILRFHAI WPA L++ N+PLPK V +HGF   KG KI
Sbjct: 245 YLTDDDSKFKRYWPADVHLIGKDILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGGKI 304

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP E+I   GVDALRYFL+RE+  G DG Y  +   +R ++DLAN +GNL++
Sbjct: 305 SKSKGNRVDPHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLLN 364

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +++  K  +G +P P  F E D+ +L     +  ++ E M N     AL  +  +V E
Sbjct: 365 RVLTVAEKYTEGKVPEPKEFQEEDKFLLQKGDDMANKVEEAMANFNPANALTYIWEVVQE 424

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +RY D Q PW L  + N DR +TV+Y  +E +R+++I+L AF+P +A +I   L   D 
Sbjct: 425 ANRYIDQQAPWNLASSGNKDRLNTVIYTLLEALRKISIMLYAFMPNIAEEIQRQLGYKDV 484

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFP 508
              +  + D ++  G  L+K    +FP
Sbjct: 485 QFAWDLIKDVKIPVGQKLNK-GKILFP 510


>gi|77919292|ref|YP_357107.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77545375|gb|ABA88937.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 511

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 213/509 (41%), Positives = 319/509 (62%), Gaps = 9/509 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PHIGHAY  +  D+LAR+ R  G +V F TGTDEHGQK+ KAAQ  
Sbjct: 4   RFYVTTPIYYVNDVPHIGHAYTTVACDMLARYKRAQGQEVFFLTGTDEHGQKVEKAAQAK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T     D+  + ++ + + L+IS+ DFIRT+++RH      L++K+   GDIY G Y 
Sbjct: 64  GETPLELADRVVKRYQALWEKLNISHTDFIRTSQERHKKGVCDLFEKLHATGDIYLGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            WY    E ++ + ++  G           P   ++EE YFFR+S YQD+LL + E +P+
Sbjct: 124 DWYCTPCETFWTETQLMDG----CCPDCGRPTDKLKEESYFFRMSKYQDQLLKHIEENPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+++FV+ GL+DLS+SR +F WGI +P + ++++YVW DALTNY+T  GY 
Sbjct: 180 FIQPRSRRNEILNFVREGLRDLSISRTSFSWGIPVPGNERHVIYVWFDALTNYITALGYP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D+P+G    FWPA++H+IGKDILRFH +YWP FLL+A LPLP KVF+HG+   +G+K+SK
Sbjct: 240 DDPEGHYKNFWPANVHIIGKDILRFHTVYWPTFLLAAGLPLPAKVFAHGWWTVEGQKMSK 299

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNLVSRS
Sbjct: 300 SLQNVVEPNMLVDKYGVDAIRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLVSRS 359

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +M+ K + G++P P      DE  ++  +  ++++   M +   ++AL  +  L+   +
Sbjct: 360 TAMLNKYFGGILPEPKDRRPEDEPFIAAFADTVRKVDIFMDDLAFNKALQTIWELIGLGN 419

Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y D   PW L K     DR  TVLY  ++ +R +A L+   +P  ++KI  +L    ++
Sbjct: 420 KYIDDTAPWALAKDPSQQDRLGTVLYNLLDSLRLVAQLIAPVMPDTSDKILALLNSKPDS 479

Query: 484 RCF--QSLDQRLKPGFMLHKTFDPIFPRF 510
                      L+PG  + K   P+FPR 
Sbjct: 480 LTAMGDDCWGGLEPGSEIAKA-KPLFPRI 507


>gi|296535550|ref|ZP_06897732.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264136|gb|EFH10579.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 522

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 241/520 (46%), Positives = 342/520 (65%), Gaps = 13/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    + Y++T I Y N +PHIGHAY  + ADVLAR+ R+ G  V F TGTDEHGQK+ K
Sbjct: 1   MTSERRFYLTTPIYYVNDKPHIGHAYTSLAADVLARWKRMMGHQVHFLTGTDEHGQKVEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  + F DQ S+ FRD+A  ++ S DDFIRTTE+RH   C  LWK++ ++G+I+
Sbjct: 61  AAEARGMAPQDFTDQVSQAFRDLAVRMNYSNDDFIRTTEERHKLACAALWKRLEERGEIH 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY++RDEA+Y  DE+ +  DGQ +     PV+W+ E  YFFRLS +Q+KLL +Y
Sbjct: 121 LGHYEGWYAVRDEAFYGPDEITE-KDGQKFAPTGAPVEWVREPSYFFRLSNWQEKLLEFY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P  RRNEVISFVKSGL DLS+SR +F WG+K+P D  ++MYVW+DALTNY+T
Sbjct: 180 EANPDFIAPASRRNEVISFVKSGLTDLSISRTSFKWGVKVPGDEAHVMYVWLDALTNYIT 239

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  +   +   FWPAD+H +GKDILRFHAIYWPAFL++A LP P++VF+HG+  ++G
Sbjct: 240 ALGY-PDESAANWSFWPADVHFVGKDILRFHAIYWPAFLMAAGLPTPRRVFAHGWWTNEG 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGNVIDP+ +IEE G+D +RYFL+RE+  G DG + +  L  R+N +LA+ +GN
Sbjct: 299 QKISKSLGNVIDPLALIEEFGLDPVRYFLLREVPFGSDGDFQRKALAARLNGELADALGN 358

Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESILSV---------CSRVLQEIRENMQNQLI 410
           L +R++S+I ++ +G++P P G   E+D + L+             +  ++   +  Q  
Sbjct: 359 LANRTLSLIQRNCEGVLPEPAGTEAEADRAFLAETGLEIGADGTLALAAKVDALLNEQKF 418

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             AL+ V + + E + Y   ++PW LKKT+  R   VL    + +R  A LL+ F+P+  
Sbjct: 419 DAALSLVFASIREANGYITREQPWALKKTDLARMRVVLRRLHDALRAFATLLEPFMPESM 478

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            K+ D L V  E R   +L   L  G  L     P+F + 
Sbjct: 479 AKLLDQLGVPAEARSVAALATALPGGIALP-PPSPLFQKI 517


>gi|49474218|ref|YP_032260.1| methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|49239722|emb|CAF26101.1| Methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 519

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 262/510 (51%), Positives = 362/510 (70%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I +D LARF RLDG +V F +GTDEHG K+ + A 
Sbjct: 2   RDTYYITTPIFYPNSTPHIGHAYSAIASDALARFQRLDGKNVFFLSGTDEHGLKMQQTAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K   D+NS  F+ M   L+ S DDFIRTTE+RH+  C+ +WKK+   GDIY GC
Sbjct: 62  ALGMTPKQLADRNSAVFKKMLAALNCSNDDFIRTTEERHYQACQEIWKKMQADGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y GWYS+R EAYY + E   G D      +  +PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YKGWYSVRQEAYYEEKETEVGEDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ER NEVISFVKSGLKD+S+SR +F WGI +P +P+++MYVW+DALTNYL+  
Sbjct: 182 HPDFIAPLERYNEVISFVKSGLKDISISRASFHWGICVPGNPKHVMYVWVDALTNYLSAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D     K  FWPA++H+IGKDI+RFHA+YWPAFL+SA + LPK+VF+HGF+L++G K
Sbjct: 242 GFFDGNS-KKRDFWPANIHIIGKDIIRFHAVYWPAFLMSAGIALPKRVFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+I+  G+D +RYFL+RE+  G+DG Y  D +  R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYGHDNVVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ D  +P P AF   DE +L    + L   R+ M +Q +H AL+ + S+V+
Sbjct: 361 LRSLSMIAKNCDAKVPRPAAFLIQDEQLLKQSLQALDITRQAMSSQEMHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K NP+R STVLY+TVE++R++ I+L  F+P+ A K+ D L +++ 
Sbjct: 421 DANRYFANEQPWNLRKNNPERFSTVLYITVEILRRIGIMLLPFMPQSAAKLLDSLAISEN 480

Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +R    +   +++ G  L    +PIFPR++
Sbjct: 481 DRLLYHISHSKIQEGLDLP-PPEPIFPRYI 509


>gi|170747932|ref|YP_001754192.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654454|gb|ACB23509.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 525

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 276/510 (54%), Positives = 358/510 (70%), Gaps = 5/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+   +STAI+YPN  PHIGHAYE+I AD +ARFHRLDG DVLF+TGTDEHG KI +AA 
Sbjct: 10  RKTFALSTAISYPNGAPHIGHAYEVIAADAIARFHRLDGYDVLFSTGTDEHGLKIQQAAT 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T + FVD  +  F+ MAD +D +YD FIRTTE  H+   + +W+++   GDIY   
Sbjct: 70  RAGTTPRAFVDGTAARFQAMADRMDCAYDRFIRTTEPDHYAAAQEIWRRMEANGDIYLDK 129

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+RDEAYY++ E     DG +   A   PV+WMEEE + FRLSAYQDKLL  Y+ 
Sbjct: 130 YAGWYSVRDEAYYDEAETRLLEDGSRRSLATDTPVEWMEEENFLFRLSAYQDKLLKLYDE 189

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P FI P  RRNEV SFV+SGLKDLS+SR  FDWG+ +P  P ++MYVW+DALTNYLT T
Sbjct: 190 QPGFIGPDTRRNEVASFVRSGLKDLSVSRTNFDWGVPVPGHPNHVMYVWVDALTNYLTVT 249

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D  D  K +FWP DLHVIGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF+L KGEK
Sbjct: 250 GFPDASDPRK-EFWPMDLHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFLLSKGEK 308

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP E+ +  GVD +RYF++RE+  G DG Y  + +  R+NADLAN +GNL 
Sbjct: 309 MSKSLGNVLDPFELADTYGVDPVRYFVLREVPFGGDGSYSHEAIIGRINADLANDLGNLA 368

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ DG +P PGA   +D ++L+    +    R  M +  +H  LA++ ++V+
Sbjct: 369 QRSLSMVAKNCDGAVPDPGALDAADTALLAQADALPARARTLMGDLALHTVLAEIWAVVA 428

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF AQ+PW+L+K++P R + VLY T+E +R   IL Q FVP  A K+ D+L V  +
Sbjct: 429 EANRYFAAQEPWKLRKSDPARMNAVLYTTLESLRVFGILTQPFVPGAAAKLLDLLAVPAD 488

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            R    + +  RL PG  L     PIFPRF
Sbjct: 489 RRGLADVGEGGRLVPGTALPAPA-PIFPRF 517


>gi|296394638|ref|YP_003659522.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181785|gb|ADG98691.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 514

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 253/509 (49%), Positives = 336/509 (66%), Gaps = 4/509 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   Y++TAI Y N  PH GHAYE I AD  ARF RLDG DV F+ G DE+GQK+ ++A
Sbjct: 2   TRTPYYLTTAITYANGAPHFGHAYEFISADAFARFARLDGKDVFFSVGMDEYGQKVQQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G++ + FVD+ +  F ++   L  SYD FIRTTE  H  + + LW+++   GDIY+G
Sbjct: 62  EKEGISPQEFVDRVAERFLELHAALGSSYDRFIRTTEPGHTASVQELWRRMDANGDIYQG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNA-QHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y+GWYS+RDEA+Y ++E   G DG    +    PV W EE  YFFRLSAYQD+LL+ YE
Sbjct: 122 SYTGWYSVRDEAFYGEEETCVGEDGVRIASATGTPVAWTEESTYFFRLSAYQDRLLALYE 181

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEFI P  RRNE++ FV  GLKDLS+SR +F+WG+ +P DP+++MYVW+DALTNYLT 
Sbjct: 182 EHPEFIGPDSRRNEIVRFVSQGLKDLSVSRSSFNWGVPVPGDPEHVMYVWVDALTNYLTA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+  +  G  AKFWPADL +IGKDI RFHA+YWPAFLLSA    PK+VF HGF+L+KG 
Sbjct: 242 IGFPGDEAGV-AKFWPADLQIIGKDITRFHAVYWPAFLLSAGFAPPKRVFGHGFVLNKGH 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS G  +DP  +IE  G DA+R+F +REI  G+DG Y  + +  R NA+L+NG+GNL
Sbjct: 301 KMSKSAGTGLDPFWLIETFGQDAVRFFALREIPYGQDGSYSDEAIVTRANAELSNGLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R ++MI K++ G +P PGA    DE++L+    +L   R +   Q    A+A V  +V
Sbjct: 361 AQRCLTMIAKNFGGTVPDPGALAAEDEALLAQADGMLAAYRPHFAAQRPDLAIAAVFDVV 420

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           S  + YF AQ PW L K +  R  T+LY T EV+RQ AILLQ  +P+ + K+ D+L  + 
Sbjct: 421 SLANGYFTAQAPWTL-KEDLGRMGTILYTTAEVVRQAAILLQPAMPQASEKLLDLLGQSS 479

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             R F  L  RL PG  L +    +FPR 
Sbjct: 480 GARMFADLPARLAPGLALPEP-KAVFPRL 507


>gi|15643843|ref|NP_228891.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6094407|sp|O33925|SYM_THEMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4981630|gb|AAD36162.1|AE001768_11 methionyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|2645225|gb|AAB87143.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 629

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 220/508 (43%), Positives = 326/508 (64%), Gaps = 6/508 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKRLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  + ++      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDSLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WNDEM-FNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGFDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +YF+  KPW L K  N +R  TVLY ++E + ++A++    +P  + ++F  +   +E  
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSEEVFRRVSF-EEKP 479

Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             + L+    LKPG  +    +P+F + 
Sbjct: 480 SKEHLENWGVLKPGSTVIH-GEPLFKKI 506


>gi|225016542|ref|ZP_03705734.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum
           DSM 5476]
 gi|224950651|gb|EEG31860.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum
           DSM 5476]
          Length = 669

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 201/512 (39%), Positives = 310/512 (60%), Gaps = 10/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y++TAIAY + +PHIG+ YE++ AD +ARF R+ G DV F TGTDEHGQK+   A+
Sbjct: 22  KEKFYLTTAIAYASRKPHIGNTYEIVFADAVARFKRMQGYDVHFVTGTDEHGQKVEDLAK 81

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G++ K +VD  +   + + D++D +YD FIRTT+  H    + ++KK+ D+GDIYK  
Sbjct: 82  ESGISPKQYVDSVAGEIKTIWDLMDSTYDTFIRTTDDYHERVVQKIFKKLYDQGDIYKSE 141

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++ + ++  G            V   +EE YFF++S YQD+L+ Y E H
Sbjct: 142 YQGLYCVPCESFFTETQLVDGK----CPDCGREVVPTKEEAYFFKMSKYQDRLMEYIEQH 197

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R NE+++   K GL+DL +SR +F WG+++  DP++++YVW+DAL NY+T  
Sbjct: 198 PDFIQPKSRENEMVNNFLKPGLQDLCVSRTSFTWGVQVDFDPKHVVYVWLDALVNYITAI 257

Query: 243 GYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY          K WPADLH+IGKDILRFH IYWP FL++ +LPLPK++F H ++L   +
Sbjct: 258 GYDPEGSSELFEKEWPADLHIIGKDILRFHTIYWPIFLMALDLPLPKQIFGHPWLLSGQD 317

Query: 302 KISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           K+SKS+GNVI   +++ + G VDA+R++L+  +   +DG    + +  R N++LAN +GN
Sbjct: 318 KMSKSVGNVIYADDLVRQFGSVDAVRFYLLSAMPYAQDGSITYENVISRFNSELANTLGN 377

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R+V+M+ K +DG IP P A    DE + S+    + +    M       A+  V++ 
Sbjct: 378 LVNRTVTMVGKYFDGAIPAPTAKAPLDEELSSMAKETVAKFDGQMNALKTSDAIDTVMAF 437

Query: 421 VSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     +R  TVLY  +E IR +A+LL  F+P  A +I   + 
Sbjct: 438 ARRCNKYIDETMPWALAKDEAETERLGTVLYNLLEGIRFIAVLLTPFMPTTAEEILTQIN 497

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             D +         ++ G  + +    +F R 
Sbjct: 498 APDSDYASLKEFGGIRAGDKVGQPR-VLFGRI 528


>gi|291521134|emb|CBK79427.1| methionyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 658

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 212/513 (41%), Positives = 325/513 (63%), Gaps = 13/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +ARF R+ G DV F TGTDEHGQKI   A 
Sbjct: 3   KKPYYITTAIAYTSGKPHIGNTYEIVLADSIARFKRMQGYDVRFQTGTDEHGQKIEIKAG 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T K FVD  S   +++ D+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG 
Sbjct: 63  EAGITPKQFVDNVSGQIKEIWDLMNTSYDKFIRTTDEYHEKQVQKIFKKLHDQGDIYKGY 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G            V   +EE YFF+LS Y D+L+ Y  +H
Sbjct: 123 YEGKYCTPCESFFTESQLVDGK----CPDCGREVIDAKEEAYFFKLSKYADRLIDYINTH 178

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  R+NE+++     GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T  
Sbjct: 179 PEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYITGL 238

Query: 243 GYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + +  +   K+WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L   
Sbjct: 239 GYDVDGNSDELYKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPKQVFGHPWLLVGD 298

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI   +++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 299 GKMSKSKGNVIYADDLVNYFGVDAVRYFVLHEMPFDNDGSITWELMVERMNSDLANILGN 358

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K + G+I  PG     D+ + +V   + +++   M+   +  A+ +V +L
Sbjct: 359 LVNRTISMNNKYFGGVISNPGVNEPVDDDLKAVALAMHEKVDAKMEKLRVADAITEVFTL 418

Query: 421 VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D  +PW+L K  T  DR +TVLY  +E IR  A+ L A++P  + +I D+L 
Sbjct: 419 LRRCNKYIDETEPWKLAKDETKQDRLATVLYNLMEGIRMAAVALAAYLPDTSARILDMLG 478

Query: 479 VADENRCFQSLDQ--RLKPGFMLHKTFDPIFPR 509
             +  R +  LDQ   L+ G  + +  + +F R
Sbjct: 479 TQE--RDYLKLDQFGLLETGGKVVEKPEILFAR 509


>gi|319399647|gb|EFV87901.1| methionyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 656

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 323/520 (62%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + + V    +        +P     V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIIGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPREI 482

Query: 474 FDILFVAD-ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 483 FKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|325663738|ref|ZP_08152142.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470231|gb|EGC73464.1| hypothetical protein HMPREF0490_02883 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 643

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 209/513 (40%), Positives = 311/513 (60%), Gaps = 26/513 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 13  DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 72

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AGVT K FVD  +   +++AD+++ SYD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 73  QEAGVTPKEFVDGVAAQVKEIADLMNTSYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 132

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++ + ++  G            VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 133 YYEGMYCTPCEAFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHINT 188

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 189 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 248

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 249 IGYDCDGENSEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 308

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 309 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFDNDGVITWELMVERMNSDLANTLG 368

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G++   G   E D  + +V  R    + E M    +  A+ ++ +
Sbjct: 369 NLVNRTISMTNKYFGGIVTDKGITEEVDAELKAVVERTPGAVDEKMDKLRVADAITEIFN 428

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY  +  I + A LL +F+P+ + KI   L
Sbjct: 429 LFKRCNKYIDETMPWALAKEEAKKDRLETVLYNLITSISKGAELLSSFMPETSEKILAQL 488

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                             G  +    + +F R 
Sbjct: 489 N-----------------GGHVTDKPEILFQRL 504


>gi|320529744|ref|ZP_08030822.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137983|gb|EFW29887.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 514

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 223/516 (43%), Positives = 329/516 (63%), Gaps = 11/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+A+ HIGHAY   +AD +ARF RL G DV F TG+DEHGQKI +
Sbjct: 1   MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARFKRLAGYDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  GVT + +VD+    F+++  +L ISYDDFIRT+E+RHH+  + ++++I D+GDIY
Sbjct: 61  AAEKEGVTPQAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+ + ++ +  +       H PVQ + EE YFFR+S Y D++L+Y 
Sbjct: 121 KGEYKGLYCTPCESYWTELQLDENGN---CPDCHRPVQEVSEEAYFFRMSKYADRVLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HP+FI P+ RRNE+ISF++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 KEHPDFIQPVSRRNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+ + + +  K+WP D+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYMHDKE-TFRKYWPCDVHLVGKEIVRFHTIIWGCMLMALGLALPKKVYGHGWLIVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DPI +IEE G DA+RYFL+REI  G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPIALIEEFGADAIRYFLLREITLGQDGNISRDALINRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T  D S+  + +  ++     M+   +  A+  V + 
Sbjct: 357 LLHRTLSMAKKYRAGVIVKGTGETAFDASLEEMAAETVKMYTAQMEAMELSPAIRTVWAF 416

Query: 421 VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++  ++Y D   PW L K      +   VLY  VE +   +IL+  F+P  A +I   L 
Sbjct: 417 IARTNKYIDETAPWTLAKDEAKAGQLDYVLYHLVEALHITSILIAPFMPVTARRIHAQLG 476

Query: 479 VADENRCFQSLD----QRLKPGFMLHKTFDPIFPRF 510
            AD+    Q  D      +  G  +  T + +FPR 
Sbjct: 477 FADDFDAVQLADIAQWGSITDGHTVG-TAEQLFPRI 511


>gi|125624554|ref|YP_001033037.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|281491288|ref|YP_003353268.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|124493362|emb|CAL98336.1| MetS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|281375029|gb|ADA64547.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|300071348|gb|ADJ60748.1| Methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 662

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 210/519 (40%), Positives = 315/519 (60%), Gaps = 10/519 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +  YI+T I YP+ + H+G +Y  I  DVLAR+ RL G D  + TG DEHG KI +
Sbjct: 1   MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFDTFYLTGLDEHGMKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K ++D  + + +++   LDISYD FIRTT+  H +     ++++ ++ DIY
Sbjct: 61  KAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +   +E+++   G          + V+W+EEE YFFR+  Y D
Sbjct: 121 LGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSGHEVEWVEEETYFFRMGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+ HP+FI P  R+NE+++   K GL+DL+L+R +F WGI +P +P++++YVW D
Sbjct: 181 WLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTRTSFTWGIPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  + D +  K+WP  ++++GK+I+RFH IYWP  L +  LP PKK+F H
Sbjct: 241 ALLNYITALGYNSDNDSNFKKYWP-GINMVGKEIVRFHTIYWPIMLHALGLPAPKKIFGH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  +IE  G+DA+RY+L+R I+ G+DG +  +    R+N D
Sbjct: 300 GWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFD 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL++R+VSMI K  DG I   G  TE D S+  V    +    + M     + A
Sbjct: 360 LANDLGNLLNRTVSMINKYNDGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVA 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLAN 471
           LA V +L+S  ++Y D   PW L K+  D+A    VLY   E +R    LLQ F+   + 
Sbjct: 420 LADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRATSG 479

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           KIF+ L + + +   ++L         +     PIFPR 
Sbjct: 480 KIFEQLGMDERSFSLENLSFGYSFTHPVVAKGQPIFPRL 518


>gi|289704778|ref|ZP_06501199.1| methionine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558494|gb|EFD51764.1| methionine--tRNA ligase [Micrococcus luteus SK58]
          Length = 541

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 248/535 (46%), Positives = 335/535 (62%), Gaps = 27/535 (5%)

Query: 1   MKE-REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + R   Y++TAI+YPN +PHIGHAYE I +D +ARF RLDG DV F TGTDEHGQK+ 
Sbjct: 1   MTDARAPYYLTTAISYPNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKME 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVL-DISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           + AQ  GV+      +N+  FR+M D + DISYD FIRTT+  H +  R +W+++   GD
Sbjct: 61  QTAQQQGVSALELATRNAAVFREMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGD 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLL 177
           IY G Y+GWYS+RDE Y+ +DE   G DG     +    V W EEE YFFRLS YQ  LL
Sbjct: 121 IYLGSYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLL 180

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-----------Y 226
            +Y  HP+F  P  R NEVI FV++GL+DLS+SR +F WGI +P               +
Sbjct: 181 DHYREHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPDAADADRRADH 240

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           + YVW+DALTNYLT  G+      + A++WPADLHVIGKDI RFH I+WPAFL+SA L L
Sbjct: 241 VTYVWVDALTNYLTGAGWPAEDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLEL 300

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P++V  HGF+ + G K+SKSLGNV+ P E +   G+DA+R+FL+RE   G DG Y  + +
Sbjct: 301 PRRVMIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAV 360

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             R NADLAN +GNL  RS+SM+ K+    +P PG  T++D ++L+    +L+  R    
Sbjct: 361 VSRKNADLANNLGNLAQRSLSMVAKNCGAAVPEPGELTDADRAVLAQVDALLERSRSAYA 420

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            Q  H AL +   ++ EV+ YF  Q PW L+KT+  R  TVLYVT++ +R++A+L Q  +
Sbjct: 421 VQDFHDALEETWRVLGEVNAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVM 480

Query: 467 PKLANKIFDILFVADE------------NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           P  A+++ D+L V  E             R F +  + L PG  L     P+FPR
Sbjct: 481 PDSASRLLDLLGVPAEGDAGRTGASGTGPRSFAAFHEDLVPGTPLPAP-QPVFPR 534


>gi|260588948|ref|ZP_05854861.1| methionine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540727|gb|EEX21296.1| methionine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 661

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 204/513 (39%), Positives = 307/513 (59%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE I+AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 11  DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 70

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 71  AEAGVTCKEFVDNVAGEIKSIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKG 130

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PV   +EE YFFR+S Y  +L+ +  +
Sbjct: 131 YYEGMYCTPCESFFTESQLVDGK----CPDCGRPVTPAKEEAYFFRMSKYAQRLIDHINT 186

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 187 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 246

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 247 IGYDCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 306

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 307 DGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 366

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G +         DE + +V      ++   M+   +  A+ ++ +
Sbjct: 367 NLVNRTISMSNKYFGGEVKNTNVCEPVDEELKAVVLGTKAKVAAKMEELRVADAITEIFT 426

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR +TVLY  VE I   A LL++F+P+   KI   L
Sbjct: 427 LFKRCNKYIDETMPWALAKDEDKKDRLATVLYNLVEGICIGASLLESFMPETTGKILAQL 486

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                             G  + +  + +F R 
Sbjct: 487 NAPKREYEELETFGLYPSGNKVTEKPEILFARL 519


>gi|27469211|ref|NP_765848.1| methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866027|ref|YP_187724.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366132|ref|ZP_06612819.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258352|sp|Q8CQU3|SYM_STAES RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81675420|sp|Q5HRR5|SYM_STAEQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|27316760|gb|AAO05935.1|AE016751_230 methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636685|gb|AAW53473.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319726|gb|EFE60085.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723953|gb|EGG60478.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329737889|gb|EGG74117.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 656

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPREI 482

Query: 474 FDILFVAD-ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 483 FKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|331083329|ref|ZP_08332442.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404410|gb|EGG83955.1| hypothetical protein HMPREF0992_01366 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 652

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 203/513 (39%), Positives = 307/513 (59%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE I+AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 2   DKKKYYITTAIAYTSGKPHIGNTYEAILADSIARFKRQQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGV+ K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  AEAGVSCKEFVDNVAGEIKSIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           PV   +EE YFFR+S Y  +L+ +  +
Sbjct: 122 YYEGMYCTPCESFFTESQLVDGK----CPDCGRPVTPAKEEAYFFRMSKYAQRLIDHINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 238 IGYDCDGENTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++++  GVDA+RYF++ E+    DG    + + +R+N++LAN +G
Sbjct: 298 DGKMSKSKGNVLYADQLVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSELANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G +         DE + +V      ++   M+   +  A+ ++ +
Sbjct: 358 NLVNRTISMSNKYFGGEVKNTNVCEPVDEELKAVVLGTKAKVAAKMEELRVADAITEIFT 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR +TVLY  VE I   A LL++F+P+   KI   L
Sbjct: 418 LFKRCNKYIDETMPWALAKEEDKQDRLATVLYNLVEGICIGASLLESFMPETTGKILAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                             G  + +  + +F R 
Sbjct: 478 NAPKREYEELETFGLYPSGNKVTEKPEILFARL 510


>gi|153816358|ref|ZP_01969026.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756]
 gi|317501006|ref|ZP_07959214.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145846319|gb|EDK23237.1| hypothetical protein RUMTOR_02610 [Ruminococcus torques ATCC 27756]
 gi|316897584|gb|EFV19647.1| methionine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 633

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 209/515 (40%), Positives = 313/515 (60%), Gaps = 26/515 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGVTPKEFVDGVSAEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ + 
Sbjct: 121 KGHYEGMYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + D ++  AK WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L
Sbjct: 237 TGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G++   GA  + D  + +V     + +   M    +  A+ ++
Sbjct: 357 LGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKAVIDNTPKAVDAKMDGLRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I   A LL++F+P  + KI D
Sbjct: 417 FNLFKRCNKYIDETMPWALAKDEEKKDRLETVLWNLIQGISAGARLLESFMPSTSKKILD 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                     + +  + +F R 
Sbjct: 477 QLG-----------------DGHVTEKPEILFQRL 494


>gi|242241575|ref|ZP_04796020.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234956|gb|EES37267.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 656

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 213/520 (40%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTE+RH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPREI 482

Query: 474 FDILFVAD-ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 483 FKQLNINNPDLYQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|304438288|ref|ZP_07398229.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368654|gb|EFM22338.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 516

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 222/515 (43%), Positives = 328/515 (63%), Gaps = 9/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+A+ HIGHAY   +AD +AR+ RL G DV F TG+DEHGQKI +
Sbjct: 1   MSEKTPFYITTPIYYPSAKLHIGHAYCTTVADTIARYKRLAGFDVFFLTGSDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T   +VD+   +F+++  +L ISYDDFIRTT+ RH++  + ++++I D+GDIY
Sbjct: 61  AAEKEGITPIRYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+Y+   ++    +       H PVQ + EE YFFR+S Y D+LL+Y 
Sbjct: 121 KGEYKGLYCTPCESYWTRLQLD---ENGCCPDCHRPVQEVSEEAYFFRMSKYADRLLAYI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HP+FI P+ RRNE+I+F++ GL+DL +SR +FDWGI +P DP++++YVW DALTNYLT
Sbjct: 178 NEHPDFIQPVSRRNEMIAFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GYL + +    K+WPAD+H++GK+I+RFH I W   L++  L LPKKV+ HG+++  G
Sbjct: 238 PIGYLHDKEM-FHKYWPADVHLVGKEIVRFHTIIWGCMLMALGLDLPKKVYGHGWLIVNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV+DP+ +IEE G DA+RYFL+REIA G+DG   +D L  R+N+DLAN +GN
Sbjct: 297 AKMSKSVGNVVDPVALIEEFGADAIRYFLLREIALGQDGNISRDALIGRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+ R++SM  K   G+I      T+ D ++ ++ +  +++  E M    +  A+  V +L
Sbjct: 357 LLHRTLSMAKKYRKGVITKGEGRTDFDAALETMTAATVRDYTEQMDAMELSAAVKTVWAL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +S  ++Y D   PW L K     A    VLY  VE +  +++L+  F+P  A +I + L 
Sbjct: 417 ISRTNKYIDETAPWMLAKDEAKAAQLDAVLYHLVETLHIVSVLIAPFMPTTARRIHEQLG 476

Query: 479 VADENRCFQSLD---QRLKPGFMLHKTFDPIFPRF 510
              +    Q  D       P      T + +FPR 
Sbjct: 477 FHADFDGVQLADIAAWGTTPDGHTVGTAEQLFPRI 511


>gi|331089040|ref|ZP_08337946.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330406240|gb|EGG85759.1| hypothetical protein HMPREF1025_01529 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 633

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 209/515 (40%), Positives = 313/515 (60%), Gaps = 26/515 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAVARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGVTPKEFVDGVSAEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ + 
Sbjct: 121 KGHYEGMYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + D ++  AK WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L
Sbjct: 237 TGIGYDADGDSTEQYAKLWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G++   GA  + D  + +V     + +   M    +  A+ ++
Sbjct: 357 LGNLVNRTVSMTNKYFGGVVSDKGAAEDVDADLKAVIDNTPKAVDAKMDGLRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I   A LL++F+P  + KI D
Sbjct: 417 FNLFKRCNKYIDETMPWALAKDEEKKDRLETVLWNLIQGISAGARLLESFMPSTSKKILD 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                     + +  + +F R 
Sbjct: 477 QLG-----------------DGHVTEKPEILFQRL 494


>gi|289523381|ref|ZP_06440235.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503073|gb|EFD24237.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 646

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 214/515 (41%), Positives = 323/515 (62%), Gaps = 10/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I Y N  PHIGHAY  + ADV+AR+ R+ G+D LF TGTDEHGQK+ +
Sbjct: 1   MNRESSFYITTPIYYVNDVPHIGHAYTTVAADVMARYKRMCGIDTLFATGTDEHGQKVQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +   D+   NF+ + + L+IS DDF+RTTE+RH +  + ++KK+ D+GDIY
Sbjct: 61  VAQREGITPQELADRTVLNFKKLWEALNISCDDFVRTTEQRHIEVVQYIFKKLMDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY +  E Y  + ++    +G+       P++ M EE YFFR+S Y   LL YY
Sbjct: 121 KGTYEGWYCVPCETYVPESQM---GEGKTCPDCRRPLERMTEESYFFRMSKYAQPLLEYY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P  ++P  R NE++SF+K GLKD S+SR T  WGI +P D  +++YVW DAL NYLT
Sbjct: 178 EKNPTAVMPESRYNEIVSFIKMGLKDQSVSRTTLKWGIPVPGDDAHVIYVWFDALINYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + +  K K+WP   H++GKDILRFH+I WP+ LL+  +  PK+VF+HG+   +G
Sbjct: 238 VCGYPQDEERWK-KYWPVVRHLVGKDILRFHSIVWPSMLLALGVNPPKQVFAHGWWTVEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DP EV++  G D  RYF++RE+  G DG + +  L +R+N+DLAN +GN
Sbjct: 297 EKMSKSRGNVVDPFEVVDLYGADPFRYFMLREVPFGLDGDFSEKALVQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L+SR++ M++K +DG++P P    T+ D+ I   V   +LQ +  +M       AL ++ 
Sbjct: 357 LLSRTLQMVVKYFDGIVPEPLSKSTKEDQEIGGDVVEALLQRVDRSMSRFAYDDALKEIW 416

Query: 419 SLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V   ++Y D   PW+L ++ + +R S+VLY   E ++ +A+ L+ F+P  A +I++ L
Sbjct: 417 GYVGLANKYIDLTMPWKLGEEGDRERLSSVLYNLCESLKCIALFLRPFMPAKALEIWEQL 476

Query: 478 FVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  +     F+++      G  + +    +FPR 
Sbjct: 477 GLKGKLSIDSFETVKIPYPAGTSVLRKG-ALFPRI 510


>gi|251809798|ref|ZP_04824271.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875420|ref|ZP_06284292.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251806666|gb|EES59323.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295777|gb|EFA88299.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329733027|gb|EGG69366.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 656

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 214/520 (41%), Positives = 322/520 (61%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ R+ G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T   ++D+     +++   L+IS DDFIRTTEKRH      +++++  +GDIY G 
Sbjct: 63  KAGKTELEYLDEMISGIKNLWSKLEISNDDFIRTTEKRHKQVVEKVFERLLKQGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE YY + ++           G       + V+ ++EE YFF ++ Y D+LL
Sbjct: 123 YEGWYSVPDETYYTESQLVDPVYENGKIVGGKSPDSGHEVELVKEESYFFNINKYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +Y+ +P+FI P  R+NE+I+   K GL+DL++SR +FDWG+++P +P++++YVWIDAL 
Sbjct: 183 EFYDENPDFIQPPSRKNEMINNFIKPGLEDLAVSRTSFDWGVRVPSNPKHVVYVWIDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+++ GYL + +    K+WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG+I
Sbjct: 243 NYISSLGYLSDDETLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWI 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +   +R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K + G +P   G   E DE + ++    ++   +NM++     AL+
Sbjct: 363 DLGNLVNRTISMINKYFHGELPAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V   +S  ++Y D  +PW L K    R     V+   VE IR   ILLQ F+     +I
Sbjct: 423 TVWKFISRTNKYIDETQPWVLAKDENQREMLGNVMAHLVENIRFATILLQPFLTHAPREI 482

Query: 474 FDILFVAD-ENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F  L + + +     SL Q   L     + +   PIFPR 
Sbjct: 483 FKQLNINNPDLHQLDSLQQYGMLSEAITVTEKPTPIFPRL 522


>gi|313884451|ref|ZP_07818212.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620235|gb|EFR31663.1| methionine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 675

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 205/517 (39%), Positives = 320/517 (61%), Gaps = 11/517 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG++Y  +++D +AR+ RL G DV F TGTDEHGQKI + A +
Sbjct: 6   KTFYITTPIYYPSGRLHIGNSYSTLVSDAMARYKRLMGYDVYFLTGTDEHGQKIEQKAAD 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + +VD  + + + + + L IS D F+RT++  H    + +++++  +GDIY G Y
Sbjct: 66  LGIEPQAYVDGMAADIKALWEKLKISNDGFVRTSDDYHQKAVQDIFERLLAQGDIYLGEY 125

Query: 125 SGWYSLRDEAYYND---DEVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            GWYS+ DE Y+ +    EV+K  +G+         N V+ ++EE YFF+LS Y D+LL 
Sbjct: 126 EGWYSVSDEEYFTETQLSEVFKDENGKVIGGIAPTGNKVELVKEESYFFKLSNYTDRLLE 185

Query: 179 YYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           YY+ HP+FI P  R+ E+++   K GL+DL++SR +F WGI +  +P++++YVWIDAL+N
Sbjct: 186 YYDQHPDFITPAFRKTEMVNNFIKPGLEDLAVSRTSFTWGIPVKSNPKHVVYVWIDALSN 245

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y+T  GY ++      KFWPAD+ VIGKDI RFH IYWP  L++ +LPLPKK+++HG+I+
Sbjct: 246 YITKLGYGNDHQDIMDKFWPADVQVIGKDISRFHMIYWPILLMALDLPLPKKIYAHGWIV 305

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            K  K+SKS GNVI P  +I+  G+D  R++L+RE++ G D  +  +    R N +LAN 
Sbjct: 306 MKDGKMSKSRGNVIYPETLIDRYGLDVTRFYLLREMSQGNDTVFTPEDFVNRANFELAND 365

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL++R+V+M+ K +DG +P     T+ D+   +  +  +    E+M++    +AL  V
Sbjct: 366 LGNLLNRTVAMMNKYFDGQVPQAKVSTDFDQDFEAYLADEMTAYFESMESMTFDQALDHV 425

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + +VS  ++Y D   PW L K     D+   V+Y   E +R +A LL+ F+ +   KIF 
Sbjct: 426 MHMVSRTNKYIDETTPWVLAKDPDLKDQLGAVMYHLAEALRLVANLLRPFMLESPEKIFQ 485

Query: 476 ILFVADE-NRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            L +  E NR    L   +      + K  +PIFPR 
Sbjct: 486 QLGIESETNRQLDDLAWGQFPESAQVVKKGEPIFPRL 522


>gi|218674615|ref|ZP_03524284.1| methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 483

 Score =  453 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 276/480 (57%), Positives = 371/480 (77%), Gaps = 3/480 (0%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ RLDG DV F TGTDEHGQK+ + A+  G+T +   D+NS  F+ MA +L+ S DD
Sbjct: 1   MARYQRLDGRDVFFLTGTDEHGQKMQQTARAEGITAQELADRNSGEFQAMAKLLNASNDD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           FIRTT++RHH+T R +WK ++D GDIYK  Y+GWYS+RDEAYY ++E    ADG  Y  Q
Sbjct: 61  FIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWYSVRDEAYYQENETELRADGVRYGPQ 120

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             PV+W+EE  YFF+LS YQ+KLL++YE++P+FI P ERRNEVISFVKSGLKDLS+SR T
Sbjct: 121 GTPVEWVEEASYFFKLSEYQEKLLAHYEANPDFIGPAERRNEVISFVKSGLKDLSVSRTT 180

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           FDWGIK+P+DP ++MYVW+DALTNY+T TGY+++ DG +AK+WPAD+H+IGKDI+RFHA+
Sbjct: 181 FDWGIKVPNDPSHVMYVWVDALTNYITATGYIEDRDGPRAKYWPADVHIIGKDIIRFHAV 240

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           YWPAFL+SA LPLPK+VF+HGF+L+KGEK+SKSLGNV+DP+ ++   G+D +RYF +RE+
Sbjct: 241 YWPAFLMSAKLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPVNLVNHFGLDQVRYFFLREV 300

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           + G+DG Y ++ +  R+N+DLANGIGNL SRS+SMI+K+ DG IP  GA T+ D+++L+ 
Sbjct: 301 SFGQDGSYSEEAIGTRINSDLANGIGNLASRSLSMIVKNCDGKIPECGALTDEDKAMLAQ 360

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +    RE+M  Q IHRALA +I++VSE DRYF  Q PW LKKT+P R  TVLYVT E
Sbjct: 361 ADALHTSTREDMGKQQIHRALASIIAVVSETDRYFAGQAPWALKKTDPARMGTVLYVTAE 420

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           V+RQ+AILLQ F+P+ + K+ D++    + R F +L +  RL  G  L     P+FPR++
Sbjct: 421 VVRQIAILLQPFMPESSGKLLDLVAAPADKRDFAALGEAGRLIAGTPLEAP-TPVFPRYV 479


>gi|317473421|ref|ZP_07932715.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899071|gb|EFV21091.1| methionyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 655

 Score =  453 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 206/515 (40%), Positives = 314/515 (60%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A
Sbjct: 9   SKEPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKA 68

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG
Sbjct: 69  AEQGVTPKEFVDDVAGEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYEQGDIYKG 128

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            VQ  +EE YF +LS Y D+L+ Y  +
Sbjct: 129 HYEGLYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFLKLSKYADRLIEYINT 184

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++     GL+DL +SR +F WGI +  D  +++YVW+DALTNY+T 
Sbjct: 185 HPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITG 244

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + D +    K WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L  
Sbjct: 245 IGYDCDGDSTDQFNKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQG 304

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++     VDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 305 DGKMSKSKGNVLYADDLAGMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTLG 364

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K +DG++   GA  E D+ + +V +   +++++ M    +  A+ ++ +
Sbjct: 365 NLVNRTISMSNKYFDGIVEDKGAEDEFDDQLKAVVTGAREKVQKKMDVLRVADAMTEIFN 424

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +    ++Y D   PW L K +   DR +TVLY  VE I   A LL+ ++P+ + KI   L
Sbjct: 425 VFKRCNKYIDETMPWVLAKDDAKKDRLATVLYNLVEGILTGAALLEPYMPETSAKILKQL 484

Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
               E R F+ L      K G  + +  + +F R 
Sbjct: 485 N--AEPRSFEDLTSFGHYKSGTKVTEKPEILFARL 517


>gi|56551988|ref|YP_162827.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543562|gb|AAV89716.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 521

 Score =  453 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 260/505 (51%), Positives = 355/505 (70%), Gaps = 3/505 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N  
Sbjct: 5   FYITTAISYPNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARNRD 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +      D+ S +F+ M DV +ISYD FIRTTE  H+   + LWK ++D G IY G Y G
Sbjct: 65  IEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEA+Y ++E+   + G+  + Q  PV+W  EE +FFRLSA+QDKLL+YYE+HP+F
Sbjct: 125 WYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHPDF 184

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT  GY D
Sbjct: 185 IQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGYPD 244

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           N +    ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+SKS
Sbjct: 245 NKER-FDRYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DPI++ +  GVD +RYFL+RE+  G+DG Y  + +  R+NADLAN  GNL  RS+
Sbjct: 304 VGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQRSL 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S+I K+    +P+P      D++++   + +  ++   M N   ++AL  +   V E + 
Sbjct: 364 SIIAKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEANL 422

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y   Q PW ++KT+P RA T+LY T+E +RQLAIL +  +P   + + D+L    + R F
Sbjct: 423 YISEQAPWTVRKTDPVRADTILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQRDF 482

Query: 487 QSLDQRLKPGFMLHKTFDPIFPRFL 511
           ++L   L PG  L K    +FPRF+
Sbjct: 483 RALSAPLVPGLPLPKPVG-VFPRFV 506


>gi|160939618|ref|ZP_02086966.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437409|gb|EDP15173.1| hypothetical protein CLOBOL_04510 [Clostridium bolteae ATCC
           BAA-613]
          Length = 683

 Score =  453 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 208/513 (40%), Positives = 313/513 (61%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+I+AD +AR+ R  G DV F TGTDEHGQKI + A+
Sbjct: 25  KKPYYITTAIAYASGKPHIGNTYEIILADSIARYKREQGYDVFFQTGTDEHGQKIEEKAE 84

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT + FVD+ +   + + D+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG 
Sbjct: 85  AAGVTPQEFVDKAAAEIKRIWDLMNTSYDKFIRTTDQDHEAQVQKIFKKLYDQGDIYKGY 144

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G            V+  +EE YFFR+S Y  +L+ Y   H
Sbjct: 145 YEGLYCTPCESFFTESQLVDGK----CPDCGREVKPAKEEAYFFRMSKYAPRLIEYINEH 200

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 201 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVDFDPKHVTYVWLDALTNYITGI 260

Query: 243 GYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  +        K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L   
Sbjct: 261 GYDCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLLQGD 320

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 321 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANILGN 380

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K +DG++   G   E+DE +  V    +++    M+   +  A+ ++ ++
Sbjct: 381 LVNRTISMSNKYFDGVVCDKGVCGEADEDLKKVVLEEVKKADAKMEQLRVADAMTEIFNI 440

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ A KI   + 
Sbjct: 441 FRRCNKYIDETTPWTLAKDESQKDRLATVLYNLTEAIAIGASLLYSFMPETAEKILAQIH 500

Query: 479 VADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
                  FQ     L P G  +    + +F R 
Sbjct: 501 TGK-RELFQMDAFGLYPNGQKVTDKPEILFARM 532


>gi|312897476|ref|ZP_07756900.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310621537|gb|EFQ05073.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 648

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 220/514 (42%), Positives = 322/514 (62%), Gaps = 9/514 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++  YI+T I YP+A+ HIGH Y   IAD LARFHRL G D LF TG+DEHGQKI +A
Sbjct: 4   KEKKTYYITTPIYYPSAKLHIGHTYCTTIADSLARFHRLRGDDTLFITGSDEHGQKIQRA 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+    +VD     F+D+   L+IS D FIRTTE RH    + L ++  D GDIYK
Sbjct: 64  AEAQGMKPIEYVDGIVALFKDLWKRLNISNDVFIRTTEPRHERVVQDLMQRSFDNGDIYK 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWY   DE ++ ++++  G           P++ ++EE YF RL+ Y D+ L + E
Sbjct: 124 SEYEGWYCTPDETFWPENKLPDG--KHVCPDCGRPLELVKEESYFLRLNKYADRWLKFIE 181

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE+I+FVKSGL+DLS+SR +FDWGIK+P DP++++YVW DAL NYLT 
Sbjct: 182 ENPDFIQPESRRNEMIAFVKSGLEDLSISRTSFDWGIKVPWDPKHVVYVWFDALANYLTA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL++P+ +  KFWPA LH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G 
Sbjct: 242 AGYLEDPE-NFDKFWPASLHLVGKEIVRFHTIIWPIMLMSCGLPLPKKVFGHGWLIVDGT 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP+ +IE  G DALRY+L++E+  G+DG +       R+NADLAN +GNL
Sbjct: 301 KMSKSLGNVVDPVPLIERYGADALRYYLLKEVRLGQDGNFSLPTFINRINADLANDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R+++M+ K  DG++  P      D+ + ++    +++    M +  I  AL  +  L+
Sbjct: 361 LQRTLAMVEKYEDGVVAGPTDKEAVDDELAALAVETVRKFEAEMDDMKIDDALNDIWGLI 420

Query: 422 SEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K      R  TVLY  +E +R +++L+   +P  A  ++  L +
Sbjct: 421 RRSNKYIDETVPWVLAKDADCVGRLRTVLYNLMESLRIISVLVSPVIPASAENMWTQLGL 480

Query: 480 ADENRCFQSLDQRLKPGFMLHK---TFDPIFPRF 510
            +     +  D  +  G+ +       + +FPR+
Sbjct: 481 KNFKEV-KLADVAVWGGYPVGTHIDKGEALFPRY 513


>gi|240145103|ref|ZP_04743704.1| methionine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202775|gb|EEV01060.1| methionine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 665

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 216/517 (41%), Positives = 323/517 (62%), Gaps = 13/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI +
Sbjct: 1   MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K +VD  +   + + D+++ SYD+F+RTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y DKL++Y 
Sbjct: 121 KGSYEGLYCTPCESFWTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADKLINYI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 237 TKIGYDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNVI   ++ +  GVDA RYF++ E+    DG    D + +R N+DLAN 
Sbjct: 297 QGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLANI 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K +DG++ + G   E D  + +V +    ++ E M+N  +  A+ +V
Sbjct: 357 LGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAITEV 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+ A++I  
Sbjct: 417 FNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRILA 476

Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            L      R +  LD     + G  +    + +F R 
Sbjct: 477 QLNAG--MREYDDLDKFGLYENGNKVTDKPEILFARL 511


>gi|306820842|ref|ZP_07454465.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551114|gb|EFM39082.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 655

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 206/513 (40%), Positives = 315/513 (61%), Gaps = 8/513 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  YI+T I YP+ + HIGH Y  +  D ++R+ R  G DV F TGTDEHG+KI K 
Sbjct: 13  QDKKTFYITTPIYYPSGKLHIGHTYTTVAVDAISRYKRFTGYDVRFLTGTDEHGEKIQKK 72

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G   K ++D    + + +   ++ISYDDFIRTT+KRH +  + ++K + DKGDIY 
Sbjct: 73  AEELGKKPKEYLDGMIDDIKALWAKMEISYDDFIRTTDKRHTEAVQKIFKTLYDKGDIYL 132

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G Y +  E+++ + ++  G         H  VQ  +E  YFFRLS YQD+L  YYE
Sbjct: 133 DEYEGKYCVPCESFWTESQLVDGK----CPDCHREVQTRKESSYFFRLSKYQDRLKKYYE 188

Query: 182 SHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +P+F  P  R+ E++ +F+ +GL+DLS+SR TFDWGIK+P D ++++YVWIDAL+NY+T
Sbjct: 189 DNPDFCFPESRKKEMLTNFINAGLEDLSVSRSTFDWGIKVPFDEKHVIYVWIDALSNYIT 248

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  + D    K+WPAD H++GK+I+RFH I WPA L++ +LPLPKKV+ HG+IL   
Sbjct: 249 ALGYDSDDDSLFKKYWPADFHIVGKEIMRFHTIIWPALLMALDLPLPKKVYGHGWILFGE 308

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN++ P  +IE  G+DAL+YFL+RE   G+DG Y       R+N+DLAN +GN
Sbjct: 309 DKMSKSKGNIVYPEPIIERYGIDALKYFLLREFTFGQDGNYTNSAFLNRINSDLANDLGN 368

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  +G+IP     T   + ++S   ++ + + + M       AL ++  +
Sbjct: 369 LLSRTVSMIEKYNNGIIPIISKKTAFHDDLVSTVEQMPELVDKAMNQMQFSIALEEIWKV 428

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW+L K     +    VLY   E +R + I++   +   A +IF  L 
Sbjct: 429 IRRANKYVDETMPWKLAKDESAKEELDCVLYDLAETLRIVTIMISPILHHTAKRIFAQLN 488

Query: 479 VADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             DE + +++  +  L P  +     + +FPR 
Sbjct: 489 TPDELKTYENGKKFGLTPANIKVGKSEILFPRL 521


>gi|291537672|emb|CBL10784.1| methionyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 665

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 216/517 (41%), Positives = 323/517 (62%), Gaps = 13/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI +
Sbjct: 1   MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K +VD  +   + + D+++ SYD+F+RTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y DKL++Y 
Sbjct: 121 KGSYEGLYCTPCESFWTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADKLINYI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 237 TKIGYDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNVI   ++ +  GVDA RYF++ E+    DG    D + +R N+DLAN 
Sbjct: 297 QGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLANI 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K +DG++ + G   E D  + +V +    ++ E M+N  +  A+ +V
Sbjct: 357 LGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAITEV 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+ A++I  
Sbjct: 417 FNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRILA 476

Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            L      R +  LD     + G  +    + +F R 
Sbjct: 477 QLNAG--MREYDDLDKFGLYENGNKVTDKPEILFARL 511


>gi|241761929|ref|ZP_04760014.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373609|gb|EER63181.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 521

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 260/505 (51%), Positives = 355/505 (70%), Gaps = 3/505 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N  
Sbjct: 5   FYITTAISYPNGKPHIGHAYEAIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARNRD 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +      D+ S +F+ M DV +ISYD FIRTTE  H+   + LWK ++D G IY G Y G
Sbjct: 65  IEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEA+Y ++E+   + G+  + Q  PV+W  EE +FFRLSA+QDKLL+YYE+HP+F
Sbjct: 125 WYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHPDF 184

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT  GY D
Sbjct: 185 IQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGYPD 244

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           N +    ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+SKS
Sbjct: 245 NKER-FDRYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DPI++ +  GVD +RYFL+RE+  G+DG Y  + +  R+NADLAN  GNL  RS+
Sbjct: 304 VGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQRSL 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S+I K+    +P+P      D++++   + +  ++   M N   ++AL  +   V E + 
Sbjct: 364 SIITKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEANL 422

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y   Q PW ++KT+P RA T+LY T+E +RQLAIL +  +P   + + D+L    + R F
Sbjct: 423 YISEQAPWTVRKTDPVRADTILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQRDF 482

Query: 487 QSLDQRLKPGFMLHKTFDPIFPRFL 511
           ++L   L PG  L K    +FPRF+
Sbjct: 483 RALSAPLVPGLPLPKPVG-VFPRFV 506


>gi|219123327|ref|XP_002181978.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406579|gb|EEC46518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 574

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 230/513 (44%), Positives = 334/513 (65%), Gaps = 11/513 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I+T I Y N +PHIGHAY     DV+ARF RL G DV F +GTDEHG+K+ ++A
Sbjct: 58  GKRPFQITTPIYYVNDKPHIGHAYTSTACDVIARFMRLSGRDVFFLSGTDEHGEKVEQSA 117

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   +  + FVDQ S NFR++ ++++IS D FIRTT + H  + +  W  + +KG IY G
Sbjct: 118 EKQNMDPQGFVDQVSVNFRELLELMNISNDKFIRTTSEDHKKSVQHFWNVMVEKGYIYMG 177

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM-EEEGYFFRLSAYQDKLLSYYE 181
            YSGWYS+RDE +Y + E+  G            V W+ +EE YFF+LS +++KLL  YE
Sbjct: 178 TYSGWYSVRDECFYTESELIDGK-----APTGAEVSWVAKEESYFFKLSQFEEKLLDLYE 232

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P FI P  R+NEV+SFVK GL+DLS+SR +F WG+ +PDD  ++MYVW+DALTNY++ 
Sbjct: 233 RNPHFIAPESRKNEVVSFVKGGLRDLSISRTSFKWGVPVPDDEDHVMYVWVDALTNYISA 292

Query: 242 TGYLDN-PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY D       +KFWPA +H++GKDILRFHA+YWPA L++A LPLPK++F+HG+    G
Sbjct: 293 LGYPDMGEGSDFSKFWPASIHIVGKDILRFHAVYWPAMLMAAELPLPKRLFAHGWWTKDG 352

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKS+GNVIDP+E++ + GVD  R+FL+ E+  G DG +    + ++ N +LAN +GN
Sbjct: 353 QKISKSIGNVIDPVELVNKYGVDQTRFFLMSEVNFGNDGDFSDRAMIQKCNTNLANELGN 412

Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L  R++S++ K+ +  +P P GA+T  DE++L     +  ++   +  Q I + +  ++ 
Sbjct: 413 LCQRTLSLVFKNCEKAVPNPVGAYTPEDEALLESARNLRNKVATEISQQSILKYVHAMVE 472

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           ++ E ++Y D   PW LKKT+P+R +TVLYV +EV+R  AIL Q  +P+ A KI D L V
Sbjct: 473 MIWEANKYIDEMAPWALKKTDPERMATVLYVLLEVLRYSAILYQPLIPESAGKILDQLTV 532

Query: 480 ADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
               R F  L +   +K G  + K    IFPR 
Sbjct: 533 PANERTFLHLSEEYSIKAGAAISKPVG-IFPRI 564


>gi|331092546|ref|ZP_08341367.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400658|gb|EGG80264.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 631

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 205/513 (39%), Positives = 309/513 (60%), Gaps = 26/513 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   ENKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGV+ K FVD  +   +++AD+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG
Sbjct: 62  EEAGVSPKEFVDGVAAQVKEIADMMNTSYDKFIRTTDEYHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGRKVQPAQEEAYFFKMSKYADRLIEHINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  +   +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 238 IGYDCDGENNEFFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G +   G   E D  + ++     + + E M    +  A+ ++ +
Sbjct: 358 NLVNRTISMTNKYFGGNVTDKGVTEEVDADLRAITENTPKAVDEKMDKLRVADAITEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K +   DR  TVLY  ++ I   A LL +F+P+ A KI   L
Sbjct: 418 LFKRCNKYIDETMPWALAKEDDKKDRLETVLYNLIQSISAGAELLSSFMPETAEKILAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                             G  +    + +F R 
Sbjct: 478 N-----------------GGNVTDKPEILFQRL 493


>gi|154249481|ref|YP_001410306.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153417|gb|ABS60649.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 650

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 218/510 (42%), Positives = 325/510 (63%), Gaps = 14/510 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y NA+PHIG +Y  II D+LAR+ RL G +V + TGTDEHGQKIA+AA+ 
Sbjct: 2   KKFYITTPIYYVNAEPHIGSSYTTIIGDILARYKRLMGYEVFYLTGTDEHGQKIAQAARE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K   D  +  F+++   L I+ D FIRTT++ H  T +    K+ + GDIYKG Y
Sbjct: 62  KGLEPKELCDTLAEKFKELWKDLGITNDYFIRTTDENHEKTVQYFVSKMMENGDIYKGIY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            GWY +  E Y+N++E+     G     +    V  + EE YFFRLS Y D LL +++ +
Sbjct: 122 EGWYCVPCETYWNEEELEHDEHGHNICPSCKREVNLIREENYFFRLSKYNDALLKHFQEN 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ P  RRNE++  ++SGLKDLS++R T  WGI +P+DP++++YVW+DAL NY++  G
Sbjct: 182 PDFVEPDFRRNEMLKILESGLKDLSITRTTLKWGIPMPNDPEHVIYVWVDALINYVSAIG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y ++ D    K+WPAD+H+IGK+I RFH++ WPA L+S  LPLPKKVF+HG++   G+KI
Sbjct: 242 YPNDMD-KFNKWWPADVHLIGKEINRFHSLIWPAMLMSVGLPLPKKVFAHGWLTVNGQKI 300

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP E + + G D +RY+LVR+I  GKDG + ++ L KR+N+DLAN  GNL+ 
Sbjct: 301 SKSLGNAIDPREYVRKYGNDVVRYYLVRDIVFGKDGDFSEENLIKRLNSDLANDYGNLLH 360

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++MI K +D +IP  G   E D+ ++     V  +  E M +  I  AL  +   +S+
Sbjct: 361 RTLAMIQKHFDSVIPGVGNLEEIDKKLIEDYDLVKNKFIELMDSYKITDALEVLWQFISQ 420

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +++YFD  KPW L K  N +R  TVL +  E I ++A L+   +P  + +++  L V ++
Sbjct: 421 LNKYFDETKPWVLAKEGNKERLGTVLSLVTESIFKVATLVSPVMPDSSLEVYKRLSVNEK 480

Query: 483 NRCFQSLDQRLKPGFMLHKT-----FDPIF 507
                  D++   G+ + K       +P+F
Sbjct: 481 ------FDEKFLSGWNIIKGNKIIHGEPLF 504


>gi|325264425|ref|ZP_08131156.1| methionine--tRNA ligase [Clostridium sp. D5]
 gi|324030496|gb|EGB91780.1| methionine--tRNA ligase [Clostridium sp. D5]
          Length = 645

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 206/498 (41%), Positives = 313/498 (62%), Gaps = 9/498 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 11  MSEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD  + + R + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 71  KAEEAGITPKEFVDDVAADIRRIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLFDQGDIY 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ + 
Sbjct: 131 KGHYEGMYCTPCESFFTESQLADGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHI 186

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 187 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVEFDPKHVVYVWLDALTNYI 246

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L
Sbjct: 247 TGIGYDCDGNNTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLL 306

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N++LAN 
Sbjct: 307 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSELANT 366

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G +   G   E D  + +V     +++   M    +  A+ ++
Sbjct: 367 LGNLVNRTVSMTNKYFAGTVCDKGVAEEVDADLKAVMESTPKKVEAKMDELRVADAITEI 426

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I   A+LL++F+P  + KI +
Sbjct: 427 FNLFKRCNKYIDETMPWVLAKDEAKKDRLETVLWNLIQGISAGAVLLESFMPSTSKKILE 486

Query: 476 ILFVADENRCFQSLDQRL 493
            L         + L QRL
Sbjct: 487 QLNDGHVTDKPEILFQRL 504


>gi|160902697|ref|YP_001568278.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360341|gb|ABX31955.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 645

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 207/508 (40%), Positives = 323/508 (63%), Gaps = 3/508 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N++PHIG AY  I+AD++ARF R+ G DV F TGTDEHGQK+ +AA+ 
Sbjct: 2   DKFYVTTPIYYVNSEPHIGSAYTTIVADIVARFKRMMGYDVFFLTGTDEHGQKVLQAAKE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + +VD  S  F+++ D + ISYD F+RTT+  H  T ++   K+ + GD+YKG Y
Sbjct: 62  KNIPPQEYVDSLSSKFKNLWDEMGISYDHFVRTTDAYHVKTVQMFVDKMMENGDVYKGKY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY + DE+++++ E+      +     +  ++W+EEE YFF+LS Y + LL +YE++P
Sbjct: 122 AGWYCIHDESFWDESEIVTQDGVKLCPECNRELKWVEEENYFFKLSKYTEPLLKHYENNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++  +  GLKDLS++R TFDWGI +  DP++++YVW+DAL NY++  GY
Sbjct: 182 DFVEPSFRRNEMLQILNDGLKDLSITRTTFDWGIPLKSDPKHVVYVWVDALINYVSAIGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +      ++WPADLH+IGK+I RFH++ WPA L+S  LPLPKKVF+HG++   G+KIS
Sbjct: 242 -SDDQQKFNRYWPADLHLIGKEINRFHSLIWPAMLMSVGLPLPKKVFAHGWLTVNGQKIS 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN +DP  +++  G D +RY+L+R+IA G+DG + ++ L  R NADL N + NLV R
Sbjct: 301 KSLGNAVDPRILMDAYGRDVIRYYLLRDIAFGRDGDFSEENLITRYNADLVNDLSNLVHR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +++M+ K ++G+IP P    + DE +L +           M+     +AL  +  ++   
Sbjct: 361 TLTMVEKYFNGVIPKPERKDKVDEELLELLESKKNAYLNLMERYQFTQALENLWEVIRFS 420

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L       DR STVLY  ++VIR ++IL+   +P  +  +   +    E
Sbjct: 421 NKYIDLTEPWILGNDPNEKDRLSTVLYNLLDVIRIISILIYPIMPDTSETMLKKIGYGLE 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++L++ L    +     DPIF R 
Sbjct: 481 ILNRENLEKGLLHSGVKVVKGDPIFQRI 508


>gi|283768674|ref|ZP_06341586.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
 gi|283105066|gb|EFC06438.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
          Length = 647

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 208/517 (40%), Positives = 317/517 (61%), Gaps = 12/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+TAIAY + +PHIG+ YE+++AD +AR+ +++G DV F TGTDEHGQK+ +
Sbjct: 1   MSEKKPYYITTAIAYTSGKPHIGNVYEIVLADAIARYKKMEGYDVRFQTGTDEHGQKVEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G T K FVD+ +   +   DV+++ YD FIRTT+  H    + +++K  D+GDIY
Sbjct: 61  KAQEQGKTPKAFVDEMATIVKKQFDVMNVQYDRFIRTTDADHEKQVQKIFRKFYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y   DEA++   ++    +          V+ M+EE YFFR+S Y D+L+ Y 
Sbjct: 121 KGEYEGMYCEEDEAFFTTSQLT---EEGCCPVCGGKVKPMKEETYFFRMSKYADRLMKYI 177

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HP+FI P  R+NE+++   K GL+DLS+SR +F WGI +  DP++++YVWIDAL+NY+
Sbjct: 178 EDHPDFIQPESRKNEIVNNFLKPGLQDLSVSRTSFKWGIPVDFDPKHVIYVWIDALSNYI 237

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K+WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H +++
Sbjct: 238 TGLGYEVDGNHDPLFKKYWPADLHLIGKDIIRFHTIYWPIMLMALDLPLPKQVFGHPWLM 297

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSLGNVI   +++   GVDA+RY  + E+   +DG    D + +R+N+DLAN 
Sbjct: 298 VGESKMSKSLGNVIYADDMVHVFGVDAMRYIFLHEMPFAQDGHITYDLMMERINSDLANN 357

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K ++G++  P      D          + +++  M+   +  A+  +
Sbjct: 358 MGNLVNRTISMQNKYFNGIVANPHVDETLDTEFKRTILGKVTDVKAQMEELRVQDAIGTI 417

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + L S  ++Y D   PW L K +    R +TVLY  +E IR   ILL+ F+P+ + KI  
Sbjct: 418 LELFSRCNKYIDETMPWSLAKDSDQIGRLATVLYNLLEAIRIGGILLRPFLPETSAKILA 477

Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            L    +   F+S D    L+    +    + +F R 
Sbjct: 478 NLNT--QQTSFESCDTFGLLETDIQVVGQPEILFQRL 512


>gi|291537807|emb|CBL10918.1| methionyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 665

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 216/517 (41%), Positives = 324/517 (62%), Gaps = 13/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI +
Sbjct: 1   MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K +VD  +   + + D+++ SYD+F+RTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y DKL++Y 
Sbjct: 121 KGSYEGLYCTPCESFWTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADKLINYI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NEHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 237 TKIGYDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNVI   ++ +  GVDA RYF++ E+    DG    D + +R N+DLAN 
Sbjct: 297 QGGEKMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLANI 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K +DG++ + G   E D  + +V +    ++ E M+N  +  A+ +V
Sbjct: 357 LGNLVNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAITEV 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+ A++I  
Sbjct: 417 FNLFRRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRILA 476

Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
            L      R + +LD     + G  +    + +F R 
Sbjct: 477 QLNAG--MREYDNLDKFGLYENGNKVTDKPEILFARL 511


>gi|239628933|ref|ZP_04671964.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519079|gb|EEQ58945.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 674

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 209/512 (40%), Positives = 308/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI + AQ
Sbjct: 6   KKPYYITTAIAYASGKPHIGNTYEIVLADSIARYKREQGYDVFFQTGTDEHGQKIEEKAQ 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGVT K FVD+ +   R + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG 
Sbjct: 66  AAGVTPKEFVDKAAAEIRRIWDLMNTSYDKFIRTTDADHEAQVQKIFKKLYDQGDIYKGY 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++ + ++  G            V+  +EE YFFR+S Y  +L+ +   H
Sbjct: 126 YEGLYCTPCESFFTESQLVDGK----CPDCGREVKPAKEEAYFFRMSKYAPRLIEHINQH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFSWGIPVDFDPKHVTYVWLDALTNYITGI 241

Query: 243 GYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  +        K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L   
Sbjct: 242 GYDCDGSSTDQFKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++SM  K +DG+I   GA  E DE +  V    +++    M+   +  A+ ++ ++
Sbjct: 362 LVNRTISMSNKYFDGVIADKGAAGEVDEDLKKVVLEEVKKADAKMEQLRVADAMTEIFNI 421

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR STVLY   E I   A LL +F+P+ A KI   L 
Sbjct: 422 FRRCNKYIDETTPWTLAKDEAQKDRLSTVLYNLTESITIGASLLYSFMPETAGKILAQLN 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                            G  +    + +F R 
Sbjct: 482 TVKRELSQMDAFGLYPSGNKVTDKPEILFARM 513


>gi|260752469|ref|YP_003225362.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551832|gb|ACV74778.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 521

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 259/505 (51%), Positives = 355/505 (70%), Gaps = 3/505 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI+YPN +PHIGHAYE I +D LAR+HRL G DV F TGTDEHG K+A+ A+N  
Sbjct: 5   FYITTAISYPNGKPHIGHAYESIASDALARYHRLAGDDVYFQTGTDEHGLKMAQTARNRD 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +      D+ S +F+ M DV +ISYD FIRTTE  H+   + LWK ++D G IY G Y G
Sbjct: 65  IEPIALADEMSSHFKTMDDVYNISYDRFIRTTEAEHYKASQALWKTLADAGHIYLGRYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEA+Y ++E+   + G+  + Q  PV+W  EE +FFRLSA+QDKLL+YYE+HP+F
Sbjct: 125 WYSIRDEAFYKEEELVTDSKGEKLSPQGTPVEWNVEESWFFRLSAFQDKLLAYYEAHPDF 184

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEVISFVKSGL DLS+SR +FDWGI +PD P ++MYVWIDALTNYLT  GY D
Sbjct: 185 IQPEARRNEVISFVKSGLADLSISRTSFDWGIPVPDSPGHVMYVWIDALTNYLTGAGYPD 244

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           N +    ++WPAD+HVIGKDI+RFHA+YWPAFL++A++ LPKKVF HGF+L++GEK+SKS
Sbjct: 245 NKER-FDRYWPADIHVIGKDIIRFHAVYWPAFLMAADIALPKKVFGHGFLLNRGEKMSKS 303

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DPI++ +  GVD +RYFL+RE+  G+DG Y  + +  R+NADLAN  GNL  RS+
Sbjct: 304 VGNVVDPIDMAKLYGVDQIRYFLLREVTFGQDGSYSHEAIVNRINADLANDFGNLAQRSL 363

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S+I K+    +P+P      D++++   + +  ++   M N   ++AL  +   V E + 
Sbjct: 364 SIIAKN-GAKVPSPEDTRAEDQALMEKIAGIPHQVATAMNNVAPNQALDAIWRGVGEANL 422

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y   Q PW ++KT+P RA ++LY T+E +RQLAIL +  +P   + + D+L    + R F
Sbjct: 423 YISEQAPWTVRKTDPVRADSILYWTIEAVRQLAILCRWAMPASCDALLDLLGQGADQRDF 482

Query: 487 QSLDQRLKPGFMLHKTFDPIFPRFL 511
           ++L   L PG  L K    +FPRF+
Sbjct: 483 RALSAPLVPGLPLPKPVG-VFPRFV 506


>gi|210617035|ref|ZP_03291370.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
 gi|210149558|gb|EEA80567.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
          Length = 643

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 203/513 (39%), Positives = 309/513 (60%), Gaps = 26/513 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++TAIAY + +PHIG+ YE ++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 14  DKKKFYMTTAIAYTSGKPHIGNTYEFVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGV+ K FVD+ +   + +AD+++ SYD FIRTT+  H    + ++K++ ++GDIYKG
Sbjct: 74  EEAGVSPKEFVDKVAGEVKAIADMMNTSYDKFIRTTDDYHEKQVQKIFKRLYEQGDIYKG 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ +  +
Sbjct: 134 HYEGMYCTPCESFFTESQLVDGK----CPDCGREVQPAQEEAYFFKMSKYADRLIEHINT 189

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 190 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 249

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 250 IGYDCDGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 309

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++   GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 310 DGKMSKSKGNVIYADELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANTLG 369

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R+VSM  K + G +   G   + D  + +V       + E M    +  A+ ++ +
Sbjct: 370 NLVNRTVSMTNKYFGGSVTDKGVAGDVDADLKAVVDGTPAAVEEKMDKLRVADAITEIFN 429

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY  ++ I + A LL +F+P+ A KI   L
Sbjct: 430 LFKRCNKYIDETMPWVLAKDEAQKDRLETVLYNLIDSISKGAELLSSFMPETAEKILAQL 489

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                             G  +    + +F R 
Sbjct: 490 N-----------------GGNVTDKPEILFQRL 505


>gi|291562908|emb|CBL41724.1| methionyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 658

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 213/514 (41%), Positives = 315/514 (61%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YISTAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A 
Sbjct: 6   KKPYYISTAIAYTSGKPHIGNTYEIVLADAIARYKREQGYDVYFQTGTDEHGQKIELKAA 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +AGVT K FVD  +   +++ D+++ SY+ FIRTT+  H    + ++KK+ D+GDIYKG 
Sbjct: 66  DAGVTPKEFVDGVAGQIKEIWDLMNTSYNKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGH 125

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y    E+++   +V  G           PVQ  +EE YFFR+S Y  KL+ Y   H
Sbjct: 126 YEGLYCTPCESFWTPSQVVDGK----CPDCGRPVQPAKEEAYFFRMSKYAPKLIEYINEH 181

Query: 184 PEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+T  
Sbjct: 182 PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVTFDPKHVTYVWLDALTNYITGI 241

Query: 243 GYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  + +      K+WPADLH+IGKDI+RFH IYWP FL++  LPLPK+VF H ++L   
Sbjct: 242 GYDCDGNSDEKFKKYWPADLHLIGKDIIRFHTIYWPIFLMALGLPLPKQVFGHPWLLQGD 301

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+    +++  GVDA+RYF++ E+    DG    D + +R+N+DLAN +GN
Sbjct: 302 GKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFENDGVISWDLMVERMNSDLANILGN 361

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R+VSM  K + G++   GA    DE + +     ++++ E M    +  A+ ++ ++
Sbjct: 362 LVNRTVSMTNKYFGGIVENKGAAEPVDEELKATVLETVKKVDEKMNKLRVADAITEIFNI 421

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K     DR +TVLY   E I   A LL +F+P+ + KI   L 
Sbjct: 422 FRRSNKYIDETTPWTLAKDEAKKDRLATVLYNLTEAITIGASLLFSFMPETSEKILAQLN 481

Query: 479 VADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
              E R  ++++   L P G  + +  + +F R 
Sbjct: 482 T--EKRSLENMNAFGLYPNGNKVTEKPEILFARM 513


>gi|229828787|ref|ZP_04454856.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM
           14600]
 gi|229793381|gb|EEP29495.1| hypothetical protein GCWU000342_00861 [Shuttleworthia satelles DSM
           14600]
          Length = 657

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 217/515 (42%), Positives = 317/515 (61%), Gaps = 9/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K YI+TAIAY + +PHIG+ YE+I+AD +ARF R +G DV F TG+DEHGQKI  
Sbjct: 1   MSNKGKYYITTAIAYTSGKPHIGNTYEIILADAIARFRRQEGYDVFFMTGSDEHGQKIQI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ K  VD+NS   R + D++D SYD F+RTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAEEAGISPKELVDRNSGEIRRIWDLMDTSYDKFMRTTDADHEAQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY   DEA++ D ++  G           PV    EE YFFR+S Y D+L+ + 
Sbjct: 121 KGTYEGWYCTSDEAFWTDSQLVDG----RCPDCGRPVTRASEEAYFFRMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +SHPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 KSHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVTFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + + S    K+WPADLH+IGKDI+RFH IYWP FL++   PLPK+VF H ++L
Sbjct: 237 TGIGYDCDGNHSDRYKKYWPADLHLIGKDIIRFHTIYWPIFLMALGQPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    + + +RVN+DLAN 
Sbjct: 297 QADGKMSKSRGNVIYADDLVDIFGVDAVRYFVLHEMPFENDGVISWELMAERVNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K + G++   G     D  + +  +  +Q + + M +  +  A+ +V
Sbjct: 357 MGNLVNRTISMANKYFGGLVEDKGLEEPVDRELKAYAAGTVQRVTDKMADLHVADAITEV 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L    ++Y D   PW L K     DR +TVLY  VE I   A LL++F+P  A++I D
Sbjct: 417 FHLFRRSNKYIDETMPWALAKDADKQDRLATVLYNLVESIAIGASLLKSFMPSTADQILD 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L +   +    S       G  +      +F R 
Sbjct: 477 QLNIGQIDYDRLSTFGNYPSGNRVTDHPQILFARL 511


>gi|225571222|ref|ZP_03780220.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
           15053]
 gi|225160053|gb|EEG72672.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
           15053]
          Length = 630

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 205/513 (39%), Positives = 308/513 (60%), Gaps = 26/513 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   EKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSRGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD  +   R + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  EEAGVTPKEFVDGVAGEIRRIWDLMNTSYDKFIRTTDGYHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ +  S
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIDHINS 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITG 237

Query: 242 TGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY    +      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 238 IGYDCGGDNTEQFRKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K + G +   G   E+D  + ++     + +   M    +  A+ ++ +
Sbjct: 358 NLVNRTISMTNKYFGGTVTDKGVAGEADADLKAMTESAPKAVEGKMDELRVADAITEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY   E I+  A+LL+ F+P+ + KI   L
Sbjct: 418 LFKRCNKYIDETMPWALAKDEEKKDRLETVLYNLQESIKAGAVLLEPFMPETSGKILGQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                                + +  + +F R 
Sbjct: 478 G-----------------DGKVTEKPEILFARL 493


>gi|291545198|emb|CBL18307.1| methionyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 647

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 208/512 (40%), Positives = 303/512 (59%), Gaps = 9/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAIAY + +PHIG+ YE++  D +AR+ R+ G DV F TGTDEHG KI + A
Sbjct: 2   SKKPYYITTAIAYASRKPHIGNTYEVVFTDAVARYKRMQGYDVFFLTGTDEHGVKIEELA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ G+T K  VD+     +D+  ++ ISYD FIRTT+ RH +  + ++KK+ D+GDIYK 
Sbjct: 62  KSEGITPKEHVDKVVGEIQDICKLMHISYDGFIRTTDPRHEEVVQKIFKKLYDQGDIYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++   ++  G            VQ  +EE YF RLS YQ  L  Y E+
Sbjct: 122 EYEGMYCTPCESFWTPSQLVDGK----CPDCGREVQPAKEEAYFLRLSKYQQWLEEYIET 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI+P  ++ E+++   K GL+DL +SR TF WGI +  DP++++YVW+DAL+NY+T 
Sbjct: 178 HPDFIVPEGKKKEMMNNFIKPGLQDLCVSRTTFQWGIPVTFDPKHVIYVWVDALSNYITA 237

Query: 242 TGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY  +       K+WP D HVIGKDI+RFH+IYWP  L +  L LP+++F H +IL   
Sbjct: 238 MGYDPDGSSDQFKKYWPCDCHVIGKDIMRFHSIYWPVMLHALGLELPRQLFGHNWILFGE 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNVI   +V++  GVDA RY+L+ E+  G DG    + L +R N DLAN +GN
Sbjct: 298 DKMSKSRGNVIYASDVVDAFGVDAARYYLLSEMPYGSDGSITYESLIERFNTDLANTLGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R+++M  K + G+I    A    D  + +   + ++E+   M    +   L  VISL
Sbjct: 358 LVNRTIAMAQKYFGGVIQPADAAEPVDADLRATALKTVEEVDRLMNQYRMADTLDAVISL 417

Query: 421 VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               ++Y D   PW L K      R   VLY  +E IR LA+LLQ F+P+ A KIF  L 
Sbjct: 418 ARRSNKYIDETMPWVLAKDEAQKPRLGAVLYNLLESIRFLAVLLQPFMPETAEKIFAQLN 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              ++    S    L  G  + +   P+F R 
Sbjct: 478 TDCKDYASLSAFGGLHAGDKVGEPV-PLFGRI 508


>gi|114565624|ref|YP_752778.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336559|gb|ABI67407.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 645

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 209/516 (40%), Positives = 325/516 (62%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ ++  YI+T I YP+   HIGHAY  + AD +ARF R+ G DV + TGTDEHGQKI K
Sbjct: 1   MQRKKSYYITTPIYYPSDNLHIGHAYTTVAADCMARFKRMQGYDVFYLTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+    +VD    + R + + + I++ DFIRTTE RH    + ++ K+ ++GDI+
Sbjct: 61  AAREKGMEPIKYVDGIVESIRQLWETMLITHTDFIRTTEARHEQLVQKIFNKVYEQGDIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWY    E ++ + ++ +G            V+ ++EE YFF +S Y D+LL + 
Sbjct: 121 ISQYEGWYCTPCETFFTERQLAEGN----CPDCGREVELLKEESYFFNMSKYADRLLEHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+HP+FI P  RRNEV++F+K GL+DL +SR TF WG+ +P + ++++YVW DAL NYLT
Sbjct: 177 ETHPDFIQPESRRNEVVNFIKMGLEDLCVSRTTFQWGVPVPFNQKHVVYVWFDALINYLT 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY+D+ +  K ++WPAD+H++ KDI+RFHAI WP  L++ +LPLPKKV +HG+I+ +G
Sbjct: 237 AIGYMDDEEKFK-QYWPADVHLMAKDIIRFHAIIWPIMLMALDLPLPKKVCAHGWIMLEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ ++++ GVDA+RY+LVRE++ G+DG+Y ++ L  R+N+DLAN +GN
Sbjct: 296 GKMSKSKGNVVDPVVLVKKYGVDAVRYYLVRELSFGQDGYYSEEMLVNRINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+++MI + +DG+IP  G     DE +++      +E  E +        +     L
Sbjct: 356 LISRTIAMIERYFDGVIPVSGIAEALDEDLINTAREAYREATEKLDKLDFASYIMATRKL 415

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VS  ++Y D   PW L K     +R ++V+Y   E IR   I+L   +P L ++    + 
Sbjct: 416 VSRANKYIDETAPWLLAKEVAKKERLASVMYNLAESIRIALIMLAPCMPTLLSRANRQIE 475

Query: 479 VADENRCFQ----SLDQRLKPGFMLHKTFDPIFPRF 510
           + D N+       +   R K G  + +  +P+FPR 
Sbjct: 476 IFDLNQNLDWDEAAEWGRCKAGSKV-RRGEPLFPRI 510


>gi|154482623|ref|ZP_02025071.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC
           27560]
 gi|149736523|gb|EDM52409.1| hypothetical protein EUBVEN_00290 [Eubacterium ventriosum ATCC
           27560]
          Length = 648

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/513 (39%), Positives = 307/513 (59%), Gaps = 13/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAIAY + +PHIG+ YE I+AD + RF R  G DV F TGTDEHGQKI   A  
Sbjct: 3   KTYYLTTAIAYTSGKPHIGNTYEAILADSIVRFKRQQGYDVRFQTGTDEHGQKIELKAAE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T K FVD  S   +++ D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG Y
Sbjct: 63  AGITPKEFVDNVSGVIKEIWDLMNTSYDKFIRTTDPDHEKQVQKIFKKLYDQGDIYKGHY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E+++ + ++  G            V   +EE YFFR+S Y D+L+ +  +HP
Sbjct: 123 EGMYCTPCESFFTESQLVDGK----CPDCGREVTPAKEEAYFFRMSKYADRLIEHINTHP 178

Query: 185 EFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVWIDAL+NY+T  G
Sbjct: 179 EFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWIDALSNYITGLG 238

Query: 244 YLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y  + +      K+WPADLH+IGKDILRFH IYWP  L++ ++PLPK++F H ++L    
Sbjct: 239 YDVDGNNDPLYDKYWPADLHLIGKDILRFHTIYWPIMLMALDVPLPKQIFGHPWLLQGDG 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI   ++    GVDA+RYF++ E+    DG    + + +R+N+DLAN +GNL
Sbjct: 299 KMSKSKGNVIYADDLANLFGVDAVRYFVLHEMPFENDGTITWELMVERMNSDLANTLGNL 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R++SM  K +DG++   G   E D+    V      +  E M    +  A+ ++ +L 
Sbjct: 359 VNRTISMSNKYFDGVVSNKGVDEEVDDDFKKVILDTPVKAAEKMDKLRVADAITEIFTLF 418

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     DR +TVLY  +E I   A LL+ F+P+ + KI   +  
Sbjct: 419 KRCNKYIDETMPWALAKEEDKQDRLATVLYNLIEGITIGASLLEPFMPETSKKILAQIN- 477

Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             + R F+ + +  +      + +  + +F R 
Sbjct: 478 -AQPRAFEDMTEFGKYPSDNKVTEKPEILFARM 509


>gi|95930673|ref|ZP_01313407.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133325|gb|EAT14990.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 510

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 215/510 (42%), Positives = 315/510 (61%), Gaps = 9/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N  PHIGHAY  +  DVLAR+ +  G +V F TGTDEHGQK+ KAA  
Sbjct: 3   KTFYITTPIYYVNDVPHIGHAYTTLACDVLARYKKARGYEVFFLTGTDEHGQKVEKAAIA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T     D+  + F  +   L+I   DFIRTT++RH +  + ++ +I ++GDIY G Y
Sbjct: 63  AGETPLELADRVMQRFAALWQKLNIDNTDFIRTTQQRHKEGVQKMFTQIQEQGDIYLGAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
             WY    E ++ + ++  G           P   ++EE YFFR+S YQ +LL + E++P
Sbjct: 123 EDWYCTPCETFWTETQLIDG----CCPDCGRPTDKLKEESYFFRMSKYQQQLLDHIEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+SFV+ GL+DLS+SR +F WGI +P D ++++YVW DAL NY+T  GY
Sbjct: 179 DFIQPRSRRNEVLSFVREGLRDLSISRTSFSWGIPVPGDDKHVIYVWFDALNNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+  G+  KFWP  +HVIGKDILRFH +YWP FL++A LPLP+KVF+HG+   +G+K+S
Sbjct: 239 PDDKQGTFEKFWPCSVHVIGKDILRFHTVYWPTFLMAAGLPLPEKVFAHGWWTVEGKKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL NV++P  +++  G+D +RYFL+RE+  G DG +    L  R+N+DLAN +GNLVSR
Sbjct: 299 KSLQNVVEPNMLVDTYGIDPIRYFLLREVPFGLDGDFSHSALIHRINSDLANDLGNLVSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S +M+ K + G +P P A  + D+  +      L+ I + M +   ++AL  +  L+S  
Sbjct: 359 STAMLNKYFGGTLPEPTAMADIDQPFIDQFPAKLELIDKQMNDLAFNKALLSIWELISSA 418

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K     +R  TV+Y  +E +R + +++  F+P    +I +IL    +
Sbjct: 419 NKYIDDTAPWGLAKDEAQKERLGTVMYNLLEAVRLIGLMVAPFLPDTGKRIMEILGQDSD 478

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           N      DQ   L+ G  + K   P+FPR 
Sbjct: 479 NLMLDGQDQWGGLQAGTTIEKAP-PMFPRI 507


>gi|222152165|ref|YP_002561325.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121294|dbj|BAH18629.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 654

 Score =  451 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 217/517 (41%), Positives = 325/517 (62%), Gaps = 12/517 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++T I YP+ + HIGHAY  +  D +AR+ R+ G DV + TGTDEHGQKI + AQ A
Sbjct: 5   TFYVTTPIYYPSGKLHIGHAYSTVAGDAIARYKRMQGYDVKYLTGTDEHGQKIQEKAQAA 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G +   ++D+   + + +   LDIS DDFIRTTE RH      +++++ ++GDIY G Y 
Sbjct: 65  GKSEIEYLDEIIADIQALWKKLDISNDDFIRTTEDRHKVVVEKIFERLLEQGDIYLGDYE 124

Query: 126 GWYSLRDEAYYNDDE-VYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSY 179
           GWYS+ DE +Y + + V    +G+           +PVQ ++EE YFF+LS Y D+L+ Y
Sbjct: 125 GWYSVPDETFYTETQLVDPIYEGEKIVGGKSPDSGHPVQLVKEESYFFKLSKYTDRLIEY 184

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y++HPEFILP+ R+NE+++   K GL+DL++SR +FDWGIK+P +P++++YVWIDALTNY
Sbjct: 185 YDAHPEFILPVSRKNEMLNNFIKPGLEDLAVSRTSFDWGIKVPSNPKHVVYVWIDALTNY 244

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GYL   +    K+WPAD+H++ K+I+RFH I WPA L++ +LPLPKK+F+HG+IL 
Sbjct: 245 ISALGYLSEDETEFNKYWPADVHIMAKEIVRFHTIIWPALLMALDLPLPKKIFAHGWILM 304

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+DP  +I+  G+DA+RY+L+RE+  G DG +  +   +R N DLAN +
Sbjct: 305 KDGKMSKSKGNVVDPHVLIDRYGLDAVRYYLMRELPFGSDGVFTPEAFVERTNFDLANDL 364

Query: 359 GNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+++MI K +D  +    G     D  I  +     +     M++     AL +V
Sbjct: 365 GNLVNRTIAMINKYFDGNLTGYKGQMHAVDAEIEDLAVATKKAYDNAMESMQYSVALQEV 424

Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+S  ++Y D   PW L K     +   +V+Y  VE IR  A+LL+ F+ +   KIF+
Sbjct: 425 WKLISRTNKYIDETTPWILIKDASQKELLESVMYHLVENIRFAAVLLRPFLTEAPYKIFE 484

Query: 476 ILFVADENR-CFQSLDQRLK-PGFMLHKTFDPIFPRF 510
            L + D     F SL+   +     + +   PIFPR 
Sbjct: 485 QLNLKDNALYGFDSLNTYGQIAELKVVEKATPIFPRL 521


>gi|206900100|ref|YP_002251787.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739203|gb|ACI18261.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 628

 Score =  451 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 230/508 (45%), Positives = 326/508 (64%), Gaps = 7/508 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI+T I Y N++PHIG  Y  I+AD  ARF+RL   DV F TG DEHGQK+A+ AQ
Sbjct: 2   RNKFYITTPIYYSNSEPHIGTVYTTIVADTFARFYRLKDYDVFFLTGLDEHGQKLARTAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G   + +VD  ++ F +    + I+ DDFIRTT+KRH +  + +++K+ D+G +YKG 
Sbjct: 62  EKGYMPQEYVDMMAQKFLETWKKIGITNDDFIRTTQKRHEEVVQKVFQKLYDEGYLYKGS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+GWY    E ++  ++++ G       +   PV+W+EEE Y+F+LSA+ + LL Y E H
Sbjct: 122 YAGWYCTPCETFWQKEDLHDGN----CPSCGRPVEWLEEETYYFKLSAFAEPLLKYIEEH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEF+ P  RRNEVISF+KSGLKD+S +R T  WG+ +P DP++ +YVW DAL NY++  G
Sbjct: 178 PEFVYPETRRNEVISFIKSGLKDISATRTTVKWGVPVPFDPKHTVYVWFDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           YL N D    ++WPAD+H+IGKDILRFHAI WPA L++ N+PLPK V +HGF   KG KI
Sbjct: 238 YLTNDDTKFKRYWPADIHLIGKDILRFHAIIWPAILMALNIPLPKTVLAHGFWTIKGGKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP E+I   GVDALRYFL+RE+  G DG Y  +   +R ++DLAN +GNLV+
Sbjct: 298 SKSKGNRVDPHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLVN 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +++  K  +G +P P  F E D  +L     V  ++ E M N     AL Q+  ++ E
Sbjct: 358 RVLTVAEKYTEGKVPEPKEFKEEDTYLLQKGEDVANKVEEAMANFNPANALTQIWEVIQE 417

Query: 424 VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +RY D Q PW L  + + DR +TV+Y  +E +R+++I+L AF+P  A +I   L   D 
Sbjct: 418 ANRYIDQQAPWNLASSGDNDRLNTVIYTLLETLRKISIMLYAFIPNTAEEIQRQLGYKDV 477

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
              +  + D ++  G  L+K    +FPR
Sbjct: 478 QFAWDLIKDVKIPVGQKLNK-GKILFPR 504


>gi|319405650|emb|CBI79273.1| Methionyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 513

 Score =  451 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 266/510 (52%), Positives = 370/510 (72%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I++D LARF + DG +V F +GTDEHG K+ + AQ
Sbjct: 2   RDIYYITTPIFYPNSAPHIGHAYNAIVSDALARFQKADGKNVFFLSGTDEHGLKMQQTAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  +L+ S +DFIRTTE+RHH  C+ LWKK+  KGDIY GC
Sbjct: 62  MLNMTPQQLADRNSAVFQKMLAMLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R EAYY + +     +G     +  +PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YAGWYSVRQEAYYEEKDTKIDQEGIRREKELGSPVEWNEEESYFFRLSRYEKALLEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+I+FVKSGLKDLS+SR TFDWGI++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDFIGPNERRNEIINFVKSGLKDLSISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTAV 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + D     K +FWPAD+H+IGKDI+RFHA+YWPAFL+SA + LPK++F+HGF+L++G K
Sbjct: 242 DFFDENS-KKRRFWPADIHIIGKDIIRFHAVYWPAFLMSAGIELPKRIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E++E  G+D +RYF +RE+  G+DG Y+ D    R+NADLAN +GNL 
Sbjct: 301 MSKSVGNVVDPFEMVERYGLDQVRYFFLREVPFGQDGSYNHDNFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +  IPTP AF   DE +L    +VL+ +R  M +Q  H AL+ + S+V+
Sbjct: 361 QRSLSMIEKNCNMKIPTPAAFLIQDEQLLKQSLQVLEIVRRTMLDQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF +++PW L+K NP+R STVLY+T+EV+R++ I+L  F+P+ A K+ D L VA+E
Sbjct: 421 DANRYFASEEPWSLRKNNPERFSTVLYITLEVLRRVGIMLLPFIPQSAAKLLDSLAVAEE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D R+K   +L     PIFPR++
Sbjct: 481 DRLLHHISDLRIKEETVLSPPV-PIFPRYI 509


>gi|319891443|ref|YP_004148318.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161139|gb|ADV04682.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465387|gb|ADX77540.1| methionyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 657

 Score =  451 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 220/520 (42%), Positives = 331/520 (63%), Gaps = 13/520 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+   HIGHAY  +  DV+AR+ RL G DV + TGTDEHGQKI + AQ
Sbjct: 3   KDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRLQGFDVRYLTGTDEHGQKIQEKAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           NAG++   ++D   ++ + + + LDIS DDFIRTTE+RH +    +++K+  KGDIY G 
Sbjct: 63  NAGMSELDYLDGMIKDIKALWEKLDISNDDFIRTTERRHTEVVEKIFEKLLSKGDIYLGE 122

Query: 124 YSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWYS+ DE +Y + ++           G       + V+ ++EE YFF+LS Y D+LL
Sbjct: 123 YEGWYSVPDETFYTETQLVDPVYEDGKIVGGKSPDSGHEVELVKEESYFFKLSNYTDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++Y++HPEFI P  R+NE+I+   K GL+DL++SR +F+WG+K+P +P++++YVW+DAL 
Sbjct: 183 AFYDAHPEFIQPPSRKNEMINNFIKPGLEDLAVSRTSFNWGVKVPSNPKHVVYVWLDALV 242

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++  GYL + D    ++WPAD+H++ K+I+RFH+I WP  L++ +LPLPKKVF+HG++
Sbjct: 243 NYVSALGYLTDDDHLFRQYWPADIHLMAKEIVRFHSIIWPIILMALDLPLPKKVFAHGWV 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K  K+SKS GNV+DP  +I+  G+DA RY+L+RE+  G DG +  +    R N DLAN
Sbjct: 303 LMKDGKMSKSKGNVMDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVDRTNFDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNLV+R++SMI K +DG +P   G   E DE +  +    ++   E+M       AL+
Sbjct: 363 DLGNLVNRTISMINKYFDGELPAYQGPTHELDEEMEQMALDTVRAYHESMDKLQFSVALS 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L+S  ++Y D   PW L K    +A+   V+   VE IR  A+LL+ F+     +I
Sbjct: 423 TVWKLISRTNKYIDETTPWILAKDESQKAALGNVMAHLVENIRFAAVLLRPFLTHAPYQI 482

Query: 474 FDILFVADENR-CFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           F+ L + +E    F+ L    +L    M+ +   PIFPR 
Sbjct: 483 FEQLHIHNEALHGFEGLATYGQLTEPIMVTEKPQPIFPRL 522


>gi|170289510|ref|YP_001739748.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170177013|gb|ACB10065.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 629

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 219/508 (43%), Positives = 325/508 (63%), Gaps = 6/508 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  + ++      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WNDEM-FNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +YF+  KPW L K  N +R  TVLY ++E + ++A++    +P  + ++F  +   +E  
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVFRRVSF-EEKP 479

Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             + L+    LK G  +    +P+F + 
Sbjct: 480 SKEHLENWGVLKSGSTVVH-GEPLFRKI 506


>gi|167747813|ref|ZP_02419940.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662]
 gi|167653175|gb|EDR97304.1| hypothetical protein ANACAC_02535 [Anaerostipes caccae DSM 14662]
          Length = 648

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/515 (39%), Positives = 311/515 (60%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  YI+TAI Y + +PHIG+ YE+I+AD +AR+ R++G DV F TGTDEHGQK+   A
Sbjct: 2   SKEPYYITTAITYTSGKPHIGNTYEIILADSIARYKRMEGYDVFFQTGTDEHGQKVELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++K++ ++GDIYKG
Sbjct: 62  AEKGVTPKEFVDDVAGEIKRIWDLMNTSYDKFIRTTDADHEAQVQKIFKRLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            VQ  +EE YF +LS Y D+L+ Y  +
Sbjct: 122 HYEGLYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFLKLSKYADRLIDYINA 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++     GL+DL +SR +F WGI +  D  +++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDEGHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP  L++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGNSTDQFKKLWPADLHLIGKDIIRFHTIYWPIILMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   ++ E   VDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADDLAEMFSVDAVRYFVLHEMPFEHDGVISWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K +DG++   G   E D+ + +V +    ++++ M    +  A+ ++ +
Sbjct: 358 NLVNRTISMSNKYFDGVVEDKGVEDEFDDQLKAVVTGARDKVQKKMDVLKVADAMTEIFN 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +    ++Y D   PW L K     DR +TVLY  VE I   A LL+ ++P+   KI   L
Sbjct: 418 VFKRCNKYIDETMPWVLAKDEAKKDRLATVLYNLVEGILTGAALLEPYMPETVEKILKQL 477

Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
               E R F+ L      K G  + +  + +F R 
Sbjct: 478 N--AEPRRFEDLTTFGHYKSGTKVTEKPEILFARL 510


>gi|163868324|ref|YP_001609533.1| methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161017980|emb|CAK01538.1| Methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 519

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 254/510 (49%), Positives = 364/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I +DVLARF RL+G  V F +GTDEHG K+ + A 
Sbjct: 2   RDTYYITTPIFYPNGHPHIGHAYSAIASDVLARFQRLNGKKVFFLSGTDEHGLKMQQTAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  VL+ S DDFIRTTE+RH+  C+ +WKK+ + GDIY G 
Sbjct: 62  ALDMTPQQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEENGDIYLGR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R EAYY + +   G D      +  +PV+W EEE YFFRLS Y+  LL YYE 
Sbjct: 122 YTGWYSVRQEAYYEEKDTEVGPDNIRREKELGSPVEWNEEESYFFRLSRYEKALLEYYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P+ERRNE+ISF+KSGLKD+S+SR +F+WG+ +P++P+++MYVW+DALTNYL+  
Sbjct: 182 HPDFIAPLERRNEIISFIKSGLKDISISRASFNWGVAVPENPKHVMYVWVDALTNYLSAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + +     K  FWPA+ H+IGKDI+RFHA+YWPAFL+SA + LPK +F+HGF+L++G K
Sbjct: 242 DFFNKNS-KKRNFWPANTHIIGKDIIRFHAVYWPAFLMSAGIELPKNIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+I+  G+D +RYFL+RE+  G+DG Y+ + L  R+NADLAN +GNL 
Sbjct: 301 MSKSVGNVVDPFEMIDHYGLDQVRYFLLREVPFGQDGSYNHESLVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ D  +P P AF   D+ +L    +VL+ + + M    +H AL+ + S V+
Sbjct: 361 QRSLSMIAKNCDAKVPKPAAFLVQDKQLLEQSLQVLETVHQAMSFHSMHLALSAIFSTVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K++P+R STVLY+TVE++R++ I+L  F+P+ A K+ D L VA++
Sbjct: 421 DANRYFANEQPWSLRKSDPERFSTVLYITVEILRRIGIMLLPFIPQSAAKLLDSLAVAED 480

Query: 483 NRCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           +R    +   +++ G  L    +PIFPR++
Sbjct: 481 DRLLYHIAHAKIQEGLDLP-PPEPIFPRYI 509


>gi|319790219|ref|YP_004151852.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114721|gb|ADU97211.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 526

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 237/513 (46%), Positives = 332/513 (64%), Gaps = 13/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++T I Y N +PH+GHAY    ADV+ARF+R  G DV F TGTDEHGQKI +AA+ 
Sbjct: 3   EKFYVTTPIYYVNDKPHLGHAYTTTAADVVARFNRFLGRDVFFLTGTDEHGQKIQQAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K FVD+    F+ + +VL+ISYD FIRTT+  H    + ++ K  + GDIY G Y
Sbjct: 63  MGMSPKEFVDRLVPVFKKLWEVLNISYDHFIRTTDPEHVKAVQHIFMKCYENGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E YY + ++    DG+   A    V  ++EE YFFRLS YQDKLL  YE +P
Sbjct: 123 EGWYCIPCETYYTEKDL---IDGKLCPACKREVTRVKEESYFFRLSKYQDKLLELYEKNP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVI+FVK GLKDLS+SR +F WGI +P + ++++YVW DALTNYLT  GY
Sbjct: 180 DFIGPEFRRNEVINFVKQGLKDLSISRTSFSWGIPVPINEKHVIYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+ +    ++WPADLH++GKDILRFHA+YWPAFL+SA LP+PK+VF+HG+   +GEK+S
Sbjct: 240 PDDTERLN-RYWPADLHLVGKDILRFHAVYWPAFLMSAGLPVPKRVFAHGWWTVEGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP EV+E+ GVD +R+FL RE++ G DG +  + L  R+N +LAN +GNL +R
Sbjct: 299 KSKGNVVDPFEVVEKFGVDQVRFFLFREVSFGLDGDFSYEKLVARINGELANDLGNLFNR 358

Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           ++SM+ K    ++P P G F E D+ I +     L+ ++E +    + +AL ++   V  
Sbjct: 359 TLSMLKKYRKSVVPEPKGEFDELDKKIANKALATLKALKELIPRAELSKALDEIWQFVGF 418

Query: 424 VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           V+ Y D + PW LKK   D    TVLY  VE +R +   L  ++P  A K+  +L +  +
Sbjct: 419 VNYYIDRRAPWSLKKEGKDAELDTVLYNMVEALRFITAFLYPYMPASAEKMVQLLKLDTK 478

Query: 483 -----NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   F+S    ++PG  + K    +FPR 
Sbjct: 479 AQELRAEQFESW-GGIEPGREVEKGG-ILFPRI 509


>gi|222100458|ref|YP_002535026.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572848|gb|ACM23660.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 643

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 211/507 (41%), Positives = 320/507 (63%), Gaps = 4/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 16  KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 76  GKDPQKFCDELAEKFKQLWKELKITNDHFIRTTDETHMKTVQEFVAKMKENGDVYKGVYK 135

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  D +       PV+W+EEE YFFRLS Y+D LL +YE HP+
Sbjct: 136 GWYCVPCETFWNEDEVVKEGDERLCPECRRPVKWVEEENYFFRLSKYRDALLKHYEEHPD 195

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R +F WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 196 FVEPDFRRNEMLKILEGGLKDLSITRTSFKWGVPMKDDPEHVIYVWVDALINYVSAIGYG 255

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +    ++WPADLH+IGK+I RFH+I WPA L+S  LPLP+KVF+HG++   G+KISK
Sbjct: 256 WNEEM-FNRWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPEKVFAHGWLTVNGQKISK 314

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 315 SLGNAIDPRFFVKRYGNDVVRYYLIRDIVFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 374

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P      D  +            + M +  +  AL ++   +++ +
Sbjct: 375 TAMINKYFNGKLPSPANEEGPDGWLKERFFETKNAYYDLMDSYRLTEALDRIWEFIADAN 434

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-N 483
           +YF+  KPW L K    +R  TVLY ++E + ++A++    +P  + ++F  +   +  +
Sbjct: 435 KYFNDTKPWVLAKEGKSERLGTVLYNSLEAVFKVALMTLPVMPDTSQEVFRRVSFDENPH 494

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           R        L+ G  +H   +P+F + 
Sbjct: 495 RNHLETWGVLRAGRSVHH-GEPLFRKI 520


>gi|219666137|ref|YP_002456572.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536397|gb|ACL18136.1| methionyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 647

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 220/510 (43%), Positives = 322/510 (63%), Gaps = 10/510 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YPNA PHIG AY  + AD  AR+HRL G DV F TGTDE+ QKI + A++ 
Sbjct: 2   KYYITTPIFYPNASPHIGTAYTTVAADAFARYHRLKGHDVYFLTGTDENAQKIVRTAESQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +VD     F+ + + LDISYDDFIRTTE+RHH+  + ++ K+ ++GDIYK  Y 
Sbjct: 62  GMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYKSEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY    E ++ ++++  G            V+ ++EE YFF+LS YQD LL + + HP+
Sbjct: 122 GWYCTPCETFWTENKLMDGKCPN--PDCGRDVELLKEESYFFKLSKYQDALLRHIKDHPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+I F++ GL+DL +SR TF WGI++P +P++++YVW+DAL NY++  GY 
Sbjct: 180 FIQPASRRNEMIKFIEGGLEDLCVSRTTFQWGIQVPFNPKHVVYVWLDALINYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304
                   ++WPA++H++GKDI+RFHA+ WP  L++ ++PLPK V+ HG+ L  +G KIS
Sbjct: 239 -PDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGHGWYLSKEGGKIS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV D  E+I   G DA+RYFL+RE+  G DG Y +D L +R+N+DLAN +GN VSR
Sbjct: 298 KSRGNVQDSFELIRRYGSDAIRYFLLREMQVGTDGAYSEDSLVERLNSDLANDLGNFVSR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++MI+K   G+IP     TE +  + ++   V+ ++ E ++      AL  +  LVS +
Sbjct: 358 SLAMIVKYRGGVIPKAAEPTELEAELRALGQEVVAKVEERLEAHDPAGALENLWRLVSRM 417

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R  TVL+   E IR L IL   F+PKL  K+F    ++DE
Sbjct: 418 NKYVDETAPWTLAKQEGQQARLDTVLHTFAEAIRILGILCAPFMPKLTGKMFRQCGISDE 477

Query: 483 NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
              +++  +   L  G  + +  + +FPR 
Sbjct: 478 LLAWEAAKEWAVLGEGIQV-QRGEALFPRI 506


>gi|319408565|emb|CBI82218.1| Methionyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 519

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 254/510 (49%), Positives = 355/510 (69%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I +D LARF RLDG DV F +GTDEHG K+ +AA+
Sbjct: 2   RDTYYITTPIFYPNGAPHIGHAYNAIASDSLARFQRLDGKDVFFLSGTDEHGLKMQQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M   L+ S DDFIRTTE+RHH TC+ +WKK+   GDIY   
Sbjct: 62  ALNITPQQLADRNSAIFQKMLTKLNCSNDDFIRTTEERHHRTCQAIWKKMEANGDIYLDR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R E+YY + +   G DG     +  +PV+W EEE YFF+LS Y+  LL +YE 
Sbjct: 122 YAGWYSVRQESYYEEKDTQIGEDGIRREKELGSPVEWNEEESYFFKLSRYEKALLEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+ISF+KSGLKD+S+SR  F+WG+ +P++ +++MYVW+DALTNYLT  
Sbjct: 182 YPDFIAPNERRNEIISFIKSGLKDISISRTNFNWGVGVPNNSKHVMYVWVDALTNYLTAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + +     K  FW A  H+IGKDI+RFHAIYWPAFL+SA + LPK++F+HGF+L++G K
Sbjct: 242 DFFNEIS-KKRHFWSASTHIIGKDIIRFHAIYWPAFLMSAGIELPKRIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+I+  G+D +RYF +RE+  G+DG Y+ +    R+ ADL N +GNL 
Sbjct: 301 MSKSVGNVVDPFEIIDRYGLDQVRYFFLREVPFGQDGSYNHESFVNRITADLVNDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ D  IP P  F   DE +L    +V++  R+ M  Q  H AL+ + S+V+
Sbjct: 361 QRSLSMIQKNCDAKIPAPTDFLAQDEQLLEQSLQVIEVARQAMSRQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF +++PW L K+NP+R  TVLYVT+EV+R++ I+L  F+P+ A K+ D L +A E
Sbjct: 421 DANRYFASEEPWSLCKSNPERFFTVLYVTLEVLRRIGIMLLPFIPQSAAKLLDSLAIAKE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D ++K G  L     PIFPR++
Sbjct: 481 DRLLHHISDSKIKEGENLPLPV-PIFPRYV 509


>gi|225376548|ref|ZP_03753769.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM
           16841]
 gi|225211585|gb|EEG93939.1| hypothetical protein ROSEINA2194_02190 [Roseburia inulinivorans DSM
           16841]
          Length = 665

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 213/516 (41%), Positives = 318/516 (61%), Gaps = 12/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++TAIAY + +PHIG+ YE+++AD +AR+ R +G DV F TGTDEHGQKI +
Sbjct: 1   MSNKGKYYMTTAIAYTSGKPHIGNTYEIVLADAIARYKRAEGYDVYFQTGTDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD  +   + + D+++ SYD+F+RTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAEAAGITPKEFVDGVAGEVKAIWDLMNTSYDNFVRTTDADHEKCVKKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            V+  +EE YFF++S Y D+L+ Y 
Sbjct: 121 KGAYEGLYCTPCESFWTESQLVDGK----CPDCGREVKPAKEEAYFFKMSKYADRLIDYI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T  GY  +       K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L 
Sbjct: 237 TKIGYDPDGSSELFQKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLPKQVFGHPWLLQ 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GNVI   +++   GVDA RYF++ E+    DG    + + +R N+DLAN +
Sbjct: 297 GGDKMSKSKGNVIYADDMVRLFGVDATRYFVLHEMPFENDGVITWELVIERFNSDLANIL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K +DG++   GA  E DE + +V +    +++E M    +  A+  V 
Sbjct: 357 GNLVNRTISMSNKYFDGVVRKTGAAEEVDEDLKAVVTGTRDKVQEKMDKLRVADAITAVF 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            L    ++Y D   PW L K     DR + VLY   E I   A LL +F+P+ A KI + 
Sbjct: 417 DLFRRCNKYIDETTPWVLAKDEADHDRLAEVLYNLTESITIGAGLLHSFLPETAEKIVNQ 476

Query: 477 LFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           L      R +  LD     + G  +  T + +F R 
Sbjct: 477 LNTT--LRDYDDLDKFGLYESGSRVTDTPEILFARL 510


>gi|218281348|ref|ZP_03487826.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989]
 gi|218217440|gb|EEC90978.1| hypothetical protein EUBIFOR_00391 [Eubacterium biforme DSM 3989]
          Length = 641

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/514 (40%), Positives = 317/514 (61%), Gaps = 10/514 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++E  Y++TAIAY + +PHIG+ YE+I++D +ARF R  G DV F TGTDEHG KI + 
Sbjct: 3   QKKEPFYLTTAIAYTSGRPHIGNTYEIILSDAIARFKRAQGYDVFFQTGTDEHGVKIEEK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGVT + FVD  +   +   D+++ SYD F+RTT+  H    + ++K++ D+GDIYK
Sbjct: 63  AKAAGVTPQEFVDGVAAQIKSNWDLMNTSYDYFVRTTDDYHVKEVQSIFKRLYDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y GWY    E+++ + ++  G           PV+  +EE YFF +  Y D+L+ Y E
Sbjct: 123 GTYEGWYCTPCESFWTESQLVDG----CCPDCGRPVKKAKEEAYFFNMQKYADRLIKYIE 178

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            HP+FI P  R+NE+++   + GL+DL +SR +F WG+ +  DP++++YVWIDAL+NY+T
Sbjct: 179 DHPDFIQPESRKNEMLNNFLRPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALSNYIT 238

Query: 241 TTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T GY  N +      K+WPA  H+IGKDILRFH IYWP  L++ +LPLPKKVF H ++L 
Sbjct: 239 TLGYHANGESDEKFKKYWPA-THIIGKDILRFHTIYWPIILMALDLPLPKKVFGHPWLLT 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNVI   +++E  GVDA+RY+ + E+   +DG    D + +R+N+DLAN +
Sbjct: 298 GSDKMSKSKGNVIYAEDLVEHFGVDAVRYYCLHEMPFAQDGTITWDLVIERINSDLANIL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSR+++M  K + G++  P      DE + +      +++   M+   +  AL ++ 
Sbjct: 358 GNLVSRTIAMSNKYFGGLVTNPNVCEAVDEELKACALETKKKVEAKMEELRVGDALDEIF 417

Query: 419 SLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +L+   ++Y D   PW L K     DR +TVLY  +E IR  A+LL +F+P+ A K+F  
Sbjct: 418 TLLRRTNKYIDETMPWVLAKDESKQDRLATVLYNLLESIRISAVLLHSFLPETAEKMFAY 477

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L     +         L+    + +  +P+F R 
Sbjct: 478 LNTKVTDLDSCDSFGNLETDIHVVEKCEPLFARI 511


>gi|294793443|ref|ZP_06758580.1| methionine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455013|gb|EFG23385.1| methionine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 648

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 314/515 (60%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY   DE ++ + ++              PV+ ++EE YFF+L  Y D+ L + E 
Sbjct: 124 EYEGWYCTPDETFWTEQKLGPNH---TCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V S + 
Sbjct: 361 NRTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIG 420

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L 
Sbjct: 421 RMNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLG 480

Query: 479 VAD-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +   E    +       L  G  + K  +PI+PRF
Sbjct: 481 LTGFEAATLEDAKTWGLLATGTKVVK-GEPIYPRF 514


>gi|89892874|ref|YP_516361.1| hypothetical protein DSY0128 [Desulfitobacterium hafniense Y51]
 gi|89332322|dbj|BAE81917.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 647

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 220/510 (43%), Positives = 324/510 (63%), Gaps = 10/510 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YPNA PHIG AY  + AD  AR+HRL G DV F TGTDE+ QKI + A++ 
Sbjct: 2   KYYITTPIFYPNASPHIGTAYTTVAADAFARYHRLKGHDVYFLTGTDENAQKIVRTAESQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +VD     F+ + + LDISYDDFIRTTE+RHH+  + ++ K+ ++GDIYK  Y 
Sbjct: 62  GMEPLAYVDGVVERFKALWEELDISYDDFIRTTEERHHEVVKKIFTKLYEQGDIYKSEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY    E ++ ++++  G            V+ ++EE YFF+LS YQD LL + + HP+
Sbjct: 122 GWYCTPCETFWTENKLIDGKCPN--PDCGRDVELLKEESYFFKLSKYQDALLRHIKDHPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNE+I F++ GL+DL +SR TF WGI++P +P++++YVW+DAL NY++  GY 
Sbjct: 180 FIQPASRRNEMIKFIEGGLEDLCVSRTTFQWGIQVPFNPKHVVYVWLDALINYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304
                   ++WPA++H++GKDI+RFHA+ WP  L++ ++PLPK V+ HG+ L  +G KIS
Sbjct: 239 -PDGELYQRYWPAEVHLMGKDIVRFHAVIWPIILMALDVPLPKVVYGHGWYLSKEGGKIS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV D  ++I   G DA+RYFL+RE+  G DG Y +D L +R+N+DLAN +GN VSR
Sbjct: 298 KSRGNVQDSFKLIRRYGSDAIRYFLLREMQVGTDGAYSEDSLVERLNSDLANDLGNFVSR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++MI+K   G+IP  G  TE +  + ++   V+ ++ E ++      AL  +  LVS +
Sbjct: 358 SLAMIVKYRGGVIPKAGEPTELEAELRALGQEVVAKVEERLEAHDPAGALENLWRLVSRM 417

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K     +R  TVL+   E IR L IL   F+PKL  K+F    ++DE
Sbjct: 418 NKYVDETAPWTLAKQEGQQERLDTVLHTFAEAIRVLGILCAPFMPKLTGKMFRQCGISDE 477

Query: 483 NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
              +++  +   L  G  + +  + +FPR 
Sbjct: 478 LLAWEAAKEWDVLGEGIQV-QRGEALFPRI 506


>gi|309809130|ref|ZP_07703003.1| methionine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170575|gb|EFO72595.1| methionine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 659

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 318/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPASTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D+   V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|281413086|ref|YP_003347165.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374189|gb|ADA67751.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 629

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 219/508 (43%), Positives = 324/508 (63%), Gaps = 6/508 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  +  +      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEEHFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WNDEM-FNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +YF+  KPW L K  N +R  TVLY ++E + ++A++    +P  + ++F  +   +E  
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVFRRVSF-EEKP 479

Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             + L+    LK G  +    +P+F + 
Sbjct: 480 SKEHLENWGVLKSGSTVIH-GEPLFRKI 506


>gi|154506267|ref|ZP_02043005.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149]
 gi|153793455|gb|EDN75875.1| hypothetical protein RUMGNA_03809 [Ruminococcus gnavus ATCC 29149]
          Length = 639

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/515 (40%), Positives = 312/515 (60%), Gaps = 26/515 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+TAIAY + +PHIG+ YE+I+AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 7   MADKKPYYITTAIAYTSGKPHIGNTYEIILADAIARYKRSQGYDVFFQTGTDEHGQKIEL 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGVT K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ D+GDIY
Sbjct: 67  KAEEAGVTPKEFVDNVSGEIKKIWDLMDTSYDKFIRTTDEDHEKQVQKIFKKLYDQGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ + 
Sbjct: 127 KGHYEGMYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHI 182

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DALTNY+
Sbjct: 183 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVTYVWLDALTNYI 242

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 243 TGIGYDCDGNSTEQFHKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 302

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 303 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 362

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G +   G   E D  + +V     + + + M+   +  A+ ++
Sbjct: 363 LGNLVNRTVSMTNKYFSGTVTDKGVAEEVDADLKAVTESTPKAVEDKMEELRVADAMTEI 422

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR  TVL+  ++ I + A LL++F+P  + KI +
Sbjct: 423 FNLFKRCNKYIDETMPWVLAKDEAKKDRLETVLWNLIQSISRGAELLESFMPSTSKKILE 482

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                     + +  + +F R 
Sbjct: 483 QLG-----------------NGHVTEKPEILFARL 500


>gi|39997330|ref|NP_953281.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39984221|gb|AAR35608.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506267|gb|ADI84990.1| methionyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 510

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 218/508 (42%), Positives = 320/508 (62%), Gaps = 8/508 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++T I Y N  PHIGHAY  + ADVLAR+ +L G +V F TGTDEHGQK+ KAA  
Sbjct: 3   RTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAANT 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T     D+  + F+ + + LDI Y DFIRTT++RH      ++ KI  +GDIY G Y
Sbjct: 63  AGETPLELADRVVKRFQGLWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
             WY    E ++ + ++  G         + PV  ++EE YFFR+S YQ++LL++ E++P
Sbjct: 123 EDWYCTPCETFWTETQLIDGK----CPDCNRPVDKLKEESYFFRMSKYQEQLLAHIEANP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE+ISFVK GL+DLS+SR +F+WGI +P + ++++YVW DALTNY+T  GY
Sbjct: 179 DFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D     K  FWP D+H+IGKDILRFHA+YWP FL++A LP+PKKVF+HG+   +G+K+S
Sbjct: 239 PDEQSAFKT-FWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL NV++P  +++  G+DA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++R
Sbjct: 298 KSLQNVVEPNMLVDRYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S +M+ K +DG++P PG  TE D +       +++++   M      + L  +  ++S  
Sbjct: 358 STAMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDELAFSKGLQAIWEVISAG 417

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K     +   TV+Y  +E  R + ++L AF+P+ + K    L   + 
Sbjct: 418 NKYIDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEP 477

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            R       RL PG ++ K  + +FPR 
Sbjct: 478 CREEDLAWGRLAPGTLIVKA-EALFPRI 504


>gi|148270780|ref|YP_001245240.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|147736324|gb|ABQ47664.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 629

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 219/508 (43%), Positives = 325/508 (63%), Gaps = 6/508 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N++PHIG AY  I+AD++AR+ R  G DV F TGTDEHGQK+ +AAQ A
Sbjct: 2   KFYITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQAAQQA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L I+ D FIRTT++ H  T +    K+ + GD+YKG Y 
Sbjct: 62  GKDPQEFCDELAEKFKQLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E ++N+DEV K  + ++      PV+W+EEE YFFRLS Y+D LL YYE HP+
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ + DDP++++YVW+DAL NY++  GY 
Sbjct: 182 FVEPDFRRNEMLKILEGGLKDLSITRTTFKWGVPMKDDPEHVIYVWVDALINYISAIGYG 241

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            N +    K+WPADLH+IGK+I RFH+I WPA L+S  LPLPKKVF+HG++   G+KISK
Sbjct: 242 WNDEM-FNKWWPADLHLIGKEINRFHSIIWPAMLMSVGLPLPKKVFAHGWLTVNGQKISK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   ++  G D +RY+L+R+I  GKDG + ++ L  R+N+DLAN  GNL+ R 
Sbjct: 301 SLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRI 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K ++G +P+P A    D  +            E M +  +  AL ++   +++V+
Sbjct: 361 TAMIKKYFNGRLPSPSAQEGLDSWLKERFFETKDAYHELMDSYRLTEALDKIWEFIADVN 420

Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +YF+  KPW L K  N +R  TVLY ++E + ++A++    +P  + ++F  +   +E  
Sbjct: 421 KYFNDTKPWILGKEGNMERLGTVLYNSLEAVFKVALMTLPVMPDTSKEVFRRVSF-EEKP 479

Query: 485 CFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             + L+    LK G  +    +P+F + 
Sbjct: 480 SKEHLENWGVLKSGSTVIH-GEPLFRKI 506


>gi|221229512|ref|YP_002502928.1| methionyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|219932619|emb|CAR70331.1| putative methionyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 537

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 250/512 (48%), Positives = 355/512 (69%), Gaps = 7/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              YI+TAIAYPNA PHIGHAYE I  D +ARF RLDGLDV F TGTDEHG K+A+AA+ 
Sbjct: 2   RPYYITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVRFLTGTDEHGLKVAQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV T     +NS  F+ M + L IS+D FIRTT+  H+   + +W+++   GDIY G Y
Sbjct: 62  AGVPTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEG-YFFRLSAYQDKLLSYYES 182
           SGWYS+RDE ++ D E     +G     +   PV W E+E  YFFRLSAY DKLL++Y++
Sbjct: 122 SGWYSVRDERFFVDSETKLLDNGIRVAVETGTPVTWTEKEQTYFFRLSAYVDKLLAHYDA 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNEVISFV  GL+D S+SR +FDWG+++P+ P ++MYVWIDALTNYLT  
Sbjct: 182 NPDFIGPEVRRNEVISFVSGGLEDFSISRTSFDWGVQVPEHPDHVMYVWIDALTNYLTGA 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D       ++WPA+LH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ + GEK
Sbjct: 242 GFPDTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNHGEK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GN++DP+ +++  GVD +RYFL+REI  G+DG Y ++ +  R+N DLAN  GNL 
Sbjct: 302 MSKSVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLA 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+  G++P P  FT +D ++L+    +L+ +R N   Q ++ AL  +  ++ 
Sbjct: 362 QRSLSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLG 421

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           E ++YF +Q+PW L+K+    +  R  TVLY T EV+R  A+L+Q  +P+ A K+ D+L 
Sbjct: 422 EANKYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLG 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++ R F ++  RL PG +L      +FPR+
Sbjct: 482 QEEDQRAFTAVSVRLAPGTVLP-PPTGVFPRY 512


>gi|312874747|ref|ZP_07734766.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089492|gb|EFQ47917.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 659

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 318/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D+   V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|295398235|ref|ZP_06808281.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973585|gb|EFG49366.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 672

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 325/521 (62%), Gaps = 12/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E  YI+T I YP+ + HIG+ Y  + +D LAR+ R +  DV+F TG DEHGQKI + 
Sbjct: 3   ENKETFYITTPIYYPSGKLHIGNTYTTVASDTLARYKRANDFDVMFLTGADEHGQKIQQK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD  +   +++   + IS D F+RT+ ++H +  + ++ ++ ++GDIY 
Sbjct: 63  AEEQGISPQEYVDGMAAGMQELWKTMKISNDIFMRTSSQQHIEAIQYIFDRLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWYS+ DE ++ +   +EVYK  +G+    +    + V+ ++EE YFF++S Y D+
Sbjct: 123 GEYEGWYSVSDEEFFTETQLEEVYKDENGKVIGGKAPSGHDVELVKEESYFFKMSKYADR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           LL YYE +P FI P  R+NE+I+   K GL+DL++SR +F+WG+ +  +P++++YVWIDA
Sbjct: 183 LLQYYEENPTFIQPETRKNEMINNFIKPGLEDLAVSRTSFNWGVPVKSNPKHVVYVWIDA 242

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY+T  GY +    +  K+WPA++H +GK+I+RFH IYWP  L++ +LPLPK++F HG
Sbjct: 243 LANYITALGYPNADAENFDKYWPANIHFVGKEIVRFHTIYWPIMLMALDLPLPKQIFGHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L +  K+SKS GNV+ P  ++E  G+DALRY+L+RE+  G DG +  D    R+N DL
Sbjct: 303 WLLMQDGKMSKSKGNVVYPEMLVERYGLDALRYYLMREVKFGHDGIFTPDNFINRINYDL 362

Query: 355 ANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+VSM+ K     +   PG  T+ D  +  + +  +   R++M       A
Sbjct: 363 ANDLGNLLNRTVSMVNKYLGGQVGAYPGQITDFDAPLEDLITTEVAAYRQSMDALQFSVA 422

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V  ++S  ++Y D   PW L K   +  +  +V+Y  V+ +R +AIL+Q  + +   
Sbjct: 423 LDHVWEIISRTNKYIDETAPWILAKDEAEAGKLQSVMYHLVDSLRVIAILIQPVMVETPA 482

Query: 472 KIFDILFVA-DENRCFQSLDQRLKPGF-MLHKTFDPIFPRF 510
           KIF+ L +  D +  F++    L P    + +   PIFPR 
Sbjct: 483 KIFEQLGLDFDADAGFENAKVGLYPETAKVVEKGQPIFPRL 523


>gi|240141004|ref|YP_002965484.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010981|gb|ACS42207.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 522

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 278/512 (54%), Positives = 365/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + +   PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D    + A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAQAPN-ARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+  + + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCEGTVPEPGAFTEADERLLAAAAALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
              R F     + RL+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEYRLQGGTALPAPA-PIFPRF 515


>gi|148553410|ref|YP_001260992.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498600|gb|ABQ66854.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 523

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 241/513 (46%), Positives = 334/513 (65%), Gaps = 10/513 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I AD +ARF R  G DV F TGTDEHG K+A+AA+ 
Sbjct: 7   EPYYITTAISYPNGRPHIGHAYEAIAADAIARFQRSMGRDVRFQTGTDEHGLKMAQAARA 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +T +   D+ S  F++M + L+IS D FIRT++  H+   + +W+ +   GD+Y   Y
Sbjct: 67  RDITPRALADEMSSYFKEMCETLNISCDRFIRTSDADHYAASQAIWQAMEANGDLYLDRY 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+  G  GQ  + Q  PV+W +EE +FFRLS YQ+ LL  Y   P
Sbjct: 127 EGWYSVRDEAFYDEKELTDGEGGQKLSPQGTPVEWTKEESWFFRLSRYQEPLLQLYRDQP 186

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE++SFV  GL DLS+SR +FDWG+ +P  P ++MYVW+DALTNYLT  GY
Sbjct: 187 DFIRPETRRNEIVSFVSGGLSDLSVSRTSFDWGVPVPGSPGHVMYVWVDALTNYLTGIGY 246

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       ++WPA+LH+IGKDI+RFH +YWPAFL+SA +PLPK+VF HGF+L+KGEK+S
Sbjct: 247 PDRDAAL-GRYWPANLHLIGKDIVRFHTVYWPAFLMSAKIPLPKQVFGHGFLLNKGEKMS 305

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP+ + E  GVD LRYFL+RE++ G+DG Y  + +  R NA+LAN  GNL  R
Sbjct: 306 KSVGNVVDPMTMAERYGVDQLRYFLLREVSFGQDGSYGHEAIVNRANAELANSFGNLAQR 365

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRV-LQEIRENMQNQLIHRALAQVISLVSE 423
           ++SMI K+ DG +P     TE D +++   +   L E     +       +   +  V  
Sbjct: 366 TLSMIFKNLDGELPALDR-TEDDAALVRAVATACLDETPRAFEQLAFSIGIEAWMKAVFA 424

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            ++Y DAQ PW L+KT+P+R  TVL     VIR LAI +   +P  A K+ D + VA + 
Sbjct: 425 CNQYVDAQAPWTLRKTDPERMKTVLGTLFAVIRDLAITILPIIPDSAGKLLDQMGVAADA 484

Query: 484 RCFQSL------DQRLKPGFMLHKTFDPIFPRF 510
           R F ++      D+    G+ + +   P+FPR 
Sbjct: 485 RDFAAIESQAWYDELRASGYRVAQPV-PLFPRL 516


>gi|282848951|ref|ZP_06258340.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581226|gb|EFB86620.1| methionine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 648

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 209/515 (40%), Positives = 313/515 (60%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY   DE ++ + ++              PV+ ++EE YFF+L  Y D+ L + E 
Sbjct: 124 EYEGWYCTPDETFWTEQKLGPNH---TCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I FV  GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRRNEMIQFVNQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V S + 
Sbjct: 361 NRTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIG 420

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L 
Sbjct: 421 RMNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLG 480

Query: 479 VAD-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +   E    +       L  G  + K  +PI+PRF
Sbjct: 481 LTGFEAATLEDAKTWGLLATGTKVVK-GEPIYPRF 514


>gi|118580084|ref|YP_901334.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502794|gb|ABK99276.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 506

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 218/509 (42%), Positives = 318/509 (62%), Gaps = 8/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TG+DEHGQK+ KAA 
Sbjct: 2   KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLMGYDVYFLTGSDEHGQKVEKAAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T     D+  + ++ + + L IS +DFIRTT++RH      L+  I ++GDIY G 
Sbjct: 62  TAGETPLELADRVVKRYQALWERLGISNNDFIRTTQERHKKGVSQLFSLIMERGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + ++ +          + PV+ ++EE YFFR+S YQ++LL++ E++
Sbjct: 122 YEDWYCTPCETFWPETQLIED----RCPDCNRPVEKLKEESYFFRMSKYQEQLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  +RNE+ISFVK GL+DLS+SR TF WGI +P + ++I+YVW DALTNYLT  G
Sbjct: 178 PDFIQPKSKRNEIISFVKEGLRDLSISRTTFSWGIPVPGNDKHIVYVWFDALTNYLTALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D+      +FWPA++H+IGKDILRFH +YWP FL++A LPLP+KVF+HG+   +G+K+
Sbjct: 238 YPDSTA-EYGRFWPANVHLIGKDILRFHTVYWPTFLMAAGLPLPEKVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  +I++ GVD +RYFL+RE+  G DG +    L +R+N+DLAN +GNL+S
Sbjct: 297 SKSLQNVVEPNMLIDKYGVDVVRYFLMREVPFGLDGDFSHTALIQRLNSDLANDLGNLLS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M +K + G++P     TE D S+    S ++  + + M      +AL  +  ++S 
Sbjct: 357 RSTAMAVKYFGGILPAATELTEIDHSLQEKTSAMIAAVDKFMDELAFSKALQAIWEVISA 416

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     DR +TV+Y  +E  R    +L AF+P    K    L    
Sbjct: 417 GNKYIDDCAPWVLAKDPAQKDRLATVMYCLLESQRIAHCILSAFLPATTAKALASLGWDG 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E          L+ G  + K  + +FPR+
Sbjct: 477 EISRESLAWGGLQEGTTITKA-EALFPRY 504


>gi|291547427|emb|CBL20535.1| methionyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 659

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 219/515 (42%), Positives = 319/515 (61%), Gaps = 13/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+++ YISTAIAY + +PHIG+ YE+++AD +ARF R  G DV F TGTDEHGQKI   A
Sbjct: 2   EKQRYYISTAIAYTSGKPHIGNTYEVVLADAIARFKRQQGYDVYFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD  S   + + D+++ SYD FIRTT+K H +  + ++KK+  KGDIYKG
Sbjct: 62  EEAGVTPKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDKDHEEQVKKIFKKMYAKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G           P    +EE YFF++S Y DKL+ Y  +
Sbjct: 122 HYEGMYCTPCESFFTESQLVDGK----CPDCGRPCVPAKEEAYFFKMSKYADKLIDYINT 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPDFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITG 237

Query: 242 TGYLDNPD--GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + +      K+WPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGNSSDKFNKYWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E++E  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVIYADELVEFFGVDAVRYFVLHEMPFENDGVITWELMVERLNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R++SM  K ++G++         DE + S   +V + +   M    +  A+ +V S
Sbjct: 358 NLVNRTISMSNKYFNGVVENKNVIEPVDEDLKSFILQVPKNVSAKMDKLRVADAITEVFS 417

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K  T  DR +TVLY  VE I   A LL++F+P+   +I   L
Sbjct: 418 LFKRCNKYIDETMPWALAKDETKQDRLATVLYNLVEGICIGASLLKSFMPRTTERILVQL 477

Query: 478 FVADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
              +  R  + ++Q  L P G  +    + +F R 
Sbjct: 478 NANE--RTLEEMEQFGLYPSGNRVTDKPEILFARL 510


>gi|225850511|ref|YP_002730745.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646396|gb|ACO04582.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 624

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 216/509 (42%), Positives = 309/509 (60%), Gaps = 10/509 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y++T I Y N  PH+GHAY  + ADVLAR+ R  G+   F TGTDEHG KI K+A
Sbjct: 2   GRKKFYVTTPIYYVNDLPHLGHAYTTVAADVLARYFRQKGVKTFFLTGTDEHGLKIQKSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G++ K   D   + F+++ +VL+ISYD FIRTT+  H    + +++K  D GDIY  
Sbjct: 62  EEKGISPKELADITHKKFKELWEVLNISYDRFIRTTDPDHIKAVQYIFQKCYDNGDIYLS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y  WY +  E +  + E+              P + ++EE YFFRLS YQDKLL  Y+ 
Sbjct: 122 EYESWYCVGCEEFKTETEIKDYD--YKCPVHLKPCEKVKEESYFFRLSKYQDKLLKLYQE 179

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
            P+FI+P  R+NEV+SFVK GLKDLS+SRK     WGI +P DP + +YVW DALTNYLT
Sbjct: 180 KPDFIMPEYRKNEVVSFVKQGLKDLSVSRKRERVKWGIPVPFDPDHTIYVWFDALTNYLT 239

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  +P+    +FWPAD+H++GKDILRFHA+YWPAFL+SA + +P+ VF+HG+   +G
Sbjct: 240 AVGYPPSPN----EFWPADVHIVGKDILRFHAVYWPAFLMSAGIEVPEMVFAHGWWTVEG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGNV+DP E  ++ GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GN
Sbjct: 296 HKMSKSLGNVVDPFEASQKYGVDQLRYFLMREVPFGLDGDFSKKAVIGRINSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L SRS+SMI K   G +P  G  ++ +E    +    ++   +++     ++AL  V   
Sbjct: 356 LFSRSLSMINKFNKGFVPGAGDISQLEEEYKELYRYTVENFDKHISKLEFNKALEIVWEF 415

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  +++Y    +PW+LKK      +T LY   + +  +  LL+ F+P       + L V 
Sbjct: 416 IDFLNKYIVKTEPWKLKKEGNSYLNTALYTVADGLLLITYLLKPFMPGKMETALEYLGV- 474

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +N   +        G  + K   P+FPR
Sbjct: 475 -DNLPSEMEPYSFPEGVKVKKKIKPLFPR 502


>gi|325684670|gb|EGD26824.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 673

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 303/518 (58%), Gaps = 10/518 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A
Sbjct: 17  NKKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKSRGYDTFFLTGTDEHGLKIEQKA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G
Sbjct: 77  EKLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLG 136

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+L
Sbjct: 137 EYTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRL 196

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ HPEFI P  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 197 LQYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 256

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG+
Sbjct: 257 ANYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGW 316

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLA
Sbjct: 317 VLIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLA 376

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+VSMI +     + P      +  + + +V ++ + +   NM       AL
Sbjct: 377 NDLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNAL 436

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V  L+S  ++Y D   PW L K    +  S V+    E +R +AI++   + +   ++
Sbjct: 437 ESVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGRM 496

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           F  L +  E+   + L       G  +     PIFPR 
Sbjct: 497 FAQLGLDWEDESQKDLQFGGFAWGVNVVAKPTPIFPRL 534


>gi|310825918|ref|YP_003958275.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308737652|gb|ADO35312.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 641

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/510 (40%), Positives = 315/510 (61%), Gaps = 8/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y++T I YP++  HIGH Y  + AD L RF  L G D    TG DEHGQKI K A+
Sbjct: 2   KEKYYVTTPIYYPSSDLHIGHTYTTVAADTLKRFKALQGYDAYMITGIDEHGQKIEKVAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + FVD+ +    ++  ++ I +D  IRTT+  H  T + ++KK+ D+GDIYKG 
Sbjct: 62  EKGMSAQAFVDEEAARIAELWKLMRIDHDQLIRTTDPEHMKTIQRIFKKLYDQGDIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY    E+++ + ++  G           PV+   EE YFF++S Y D+LL + E+H
Sbjct: 122 YEGWYCTPCESFWTESQIVDGK----CPDCGLPVEMASEEAYFFKMSKYADRLLEHIETH 177

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI P  R+NE+I+   K GL+DL +SR +F WG+ +  DP++++YVWIDAL NYL+  
Sbjct: 178 PDFIKPESRKNEMINNFIKPGLQDLCVSRTSFSWGVPVDFDPKHVVYVWIDALPNYLSAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GYL++      ++WPA++H++GKDI+RFH IYWP  L++ +LPLP +++ HG+IL KG K
Sbjct: 238 GYLNDKPDLMERYWPANVHLVGKDIIRFHTIYWPIMLMALDLPLPNQIYGHGWILLKGGK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P+E+  + GVDALRY+L+RE+  G DG Y ++ L  R+N+DLAN +GNL+
Sbjct: 298 MSKSVGNVVNPVELAGKYGVDALRYYLLREMKDGADGVYSEELLINRINSDLANDLGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+ +M +K +DG IP        D  ++ +     +     M      RAL  V  LV 
Sbjct: 358 SRTAAMTVKYFDGKIPGQREAAALDSELIKLAQDTPEVFAGYMDKVDFSRALEAVWRLVG 417

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D  +PW L K   N  R + V+Y   E +R  A+++   +P+   KI + L V 
Sbjct: 418 RTNKYIDETEPWILYKDPKNHSRLAAVMYNLTEALRFTAVMVGPVMPETGRKILESLNVP 477

Query: 481 DENRCFQSLDQRLK-PGFMLHKTFDPIFPR 509
           +  R ++SL+   + P  +  +  D +FPR
Sbjct: 478 ETLRTWKSLEVFGQYPENIKIENCDVLFPR 507


>gi|325913210|ref|ZP_08175579.1| methionine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477474|gb|EGC80617.1| methionine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 659

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 317/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSSDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|291551306|emb|CBL27568.1| methionyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 633

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 208/515 (40%), Positives = 314/515 (60%), Gaps = 26/515 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 1   MSEKPKYYITTAIAYTSGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T K FVD  S   + + D++D SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAEEAGITPKEFVDNVSTEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++ + ++  G           PVQ  +EE YFF++S Y D+L+ + 
Sbjct: 121 KGHYEGMYCTPCESFFTESQLVDGK----CPDCGRPVQPAKEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVARKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 237 TGIGYDADGNSTEQFNKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 297 QGDGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERLNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+VSM  K + G +   G   + D  + +V     + +   M +  +  A+ ++
Sbjct: 357 LGNLVNRTVSMTNKYFGGTVEDKGVVEDVDAELKAVVENASKAVDAKMADLRVADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR STVL+  ++ I + A LL++F+P  + KI +
Sbjct: 417 FNLFKRCNKYIDETTPWVLGKDESKKDRLSTVLWNLIQSISEGARLLESFMPSTSKKILE 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                     + +  + +F R 
Sbjct: 477 QLG-----------------NGHVTEKPEILFQRM 494


>gi|304438970|ref|ZP_07398893.1| methionine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372636|gb|EFM26219.1| methionine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 664

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 209/509 (41%), Positives = 310/509 (60%), Gaps = 7/509 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I YP+   HIGH Y  + AD L +F  L G DV FTTG+DEHGQK+ + A  
Sbjct: 3   KKYYLTTPIYYPSDNLHIGHTYCTVAADALKKFKILQGYDVYFTTGSDEHGQKLMQKAHE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K ++D    N + +   +DI YD FIR+T++ H    + +++K+ DKG+IYK  Y
Sbjct: 63  YGMEPKEYIDHIVDNIKALWKTMDIDYDYFIRSTDEIHEKNVQNIFQKLYDKGEIYKSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y    E+++ + ++    +G             +EE YFFRLS Y+DKL+  Y  HP
Sbjct: 123 EGYYCTPCESFWTESQLG---EGHTCPDCGRETHLAKEEAYFFRLSKYRDKLIELYNEHP 179

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI+P  R+NE++    + GL DLS+SR +F WG+K+P D  +I+YVWIDAL+ YLT  G
Sbjct: 180 EFIVPESRKNEMVKNFLEGGLDDLSVSRSSFKWGVKVPFDDNHIVYVWIDALSCYLTGLG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  N +    +FWPAD+H++GK+I+RFH I WPA L++ ++PLPK+VF HG+IL   +K+
Sbjct: 240 YGWNDEQ-FNEFWPADVHLVGKEIMRFHTIIWPAILMALDMPLPKQVFGHGWILFDNDKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+ P  +I+  GVDAL+YFL+RE + G DG + K+    R+N+DLAN +GNLVS
Sbjct: 299 SKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMARLNSDLANDLGNLVS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+VSMI+K  DG+I    A TE D+S++ + + +  ++ + M+      AL  + +LV  
Sbjct: 359 RTVSMIIKYNDGVIEKTDAKTEFDDSLIELATSIRSKVEKAMETYQFSDALEAIWTLVRR 418

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     D  + VLY   E +R ++IL+  F+   A +I   L +  
Sbjct: 419 GNKYVDETTPWILAKDEAKKDELNNVLYNLAESLRIVSILISPFLTNTAKEIRRQLGIEG 478

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E +   + +  L          D IFPR 
Sbjct: 479 EIKLEDASEFGLLASGAKVTKGDVIFPRL 507


>gi|309804975|ref|ZP_07699033.1| methionine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165735|gb|EFO67960.1| methionine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 659

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 318/521 (61%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANNTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D+   V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDKLKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|322420739|ref|YP_004199962.1| methionyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127126|gb|ADW14686.1| methionyl-tRNA synthetase [Geobacter sp. M18]
          Length = 509

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 219/509 (43%), Positives = 322/509 (63%), Gaps = 8/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA 
Sbjct: 2   KPAFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLMGFDVFFLTGTDEHGQKVEKAAN 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T     D+  + F+ + + L+IS+ DFIRTT++RH     +L+ ++  KGDIY G 
Sbjct: 62  AAGETPLELADRVMKRFQSLWEKLEISHTDFIRTTQERHKKGVSVLFDRVMAKGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + ++            + P + ++EE YFFR+S YQD+LL++ E++
Sbjct: 122 YEDWYCTPCETFWTETQLID----YKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISFVK GL+DLS+SR TF+WGI +P + ++++YVW DALTNY+T  G
Sbjct: 178 PDFIQPKSRRNEIISFVKEGLRDLSVSRTTFEWGIPVPGNDKHVIYVWFDALTNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    +  K+WP D+H+IGKDILRFH +YWP FL++A LP+PK+VF+HG+   +G+K+
Sbjct: 238 YPDEEG-NFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKRVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++
Sbjct: 297 SKSLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALIHRINSDLANDLGNLLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M+ K + G +  PG  +E D++       ++ ++   +++    RAL  +  ++S 
Sbjct: 357 RSTAMLGKYFGGELQAPGEESELDKAYREKTLAMIGQVDGFIEDMAFSRALQAIWEVISA 416

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R STV+Y  +E  R +  LL AF+PK A K    L   +
Sbjct: 417 GNKYIDETAPWTLAKDPEQRERLSTVMYYMLESQRIVYTLLSAFMPKTAEKGLSYLGWPE 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                      LKPG  + K  + +FPR 
Sbjct: 477 AASAEGLAWGGLKPGTAIAKA-EALFPRI 504


>gi|325912366|ref|ZP_08174762.1| methionine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920621|ref|ZP_08277308.1| methionine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|325475837|gb|EGC79007.1| methionine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328935879|gb|EGG32339.1| methionine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 659

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 317/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|312874068|ref|ZP_07734103.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090408|gb|EFQ48817.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 659

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 317/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANAASLCWGAY-GWKNYVTKNPKPIFPRL 520


>gi|218532446|ref|YP_002423262.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218524749|gb|ACK85334.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 522

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 277/512 (54%), Positives = 364/512 (71%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD SYD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  ASRAGVTPRAFVDDMAGRFKAVADRLDCSYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + +   PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETTLGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLGPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D    + A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAQAPN-ARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGSDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ +G +P PGAFTE+DE +L+  + + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMITKNCEGAVPEPGAFTEADERLLAAAAALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
              R F     +  L+ G  L     PIFPRF
Sbjct: 485 VNARSFAFTGAEHSLQGGTALPAPA-PIFPRF 515


>gi|220926667|ref|YP_002501969.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951274|gb|ACL61666.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 515

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 269/510 (52%), Positives = 361/510 (70%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  I+TAI+YPN  PHIGHAYE+I  D +ARF R+DG DV FTTGTDEHG KI + A  
Sbjct: 4   ERFTITTAISYPNGAPHIGHAYEVIATDAIARFKRIDGYDVFFTTGTDEHGLKIQQTAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + FVD  +  FR MA+ L+ S+D FIRTT+  H    + LW+++ + GDIY   Y
Sbjct: 64  AGVTPRAFVDAMAPRFRAMAEALNCSFDRFIRTTDPDHVAASQALWRRMEEAGDIYLSKY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDEAYY++ E+  G DG     +   PV+W+EEE YFFRLSAY D+LL++Y  +
Sbjct: 124 SGWYSVRDEAYYDESELVLGPDGVRCAERTGTPVEWVEEESYFFRLSAYADRLLAHYAEN 183

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNEV+SFV+SGL+DLS+SR TFDWG+ +P  P ++MYVW+DALTNY+T+ G
Sbjct: 184 PDFIGPETRRNEVVSFVRSGLQDLSVSRTTFDWGVPVPGAPGHVMYVWVDALTNYITSCG 243

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D  D  + + WPADLHVIGKDI+RFHA+YWPAFL+SA + LPK+VF HGF+L +GEK+
Sbjct: 244 FPDEGDP-RWRHWPADLHVIGKDIIRFHAVYWPAFLMSAGVALPKRVFGHGFLLSRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP+E+    GVD LRYF++RE+  G+DG Y  + +  R NADLAN +GNL  
Sbjct: 303 SKSLGNVVDPVELAGLYGVDPLRYFVLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++MI ++  G +P PGA  E+D ++L+    +    R  M +  +H ALA++ ++V+E
Sbjct: 363 RSLTMIARNCGGAVPEPGALIEADRALLAAADALPAAARAAMTDYALHHALAEIWAVVAE 422

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF  Q+PW L+KT+P R  TVLYVT E +R + IL+Q FVP  A K+ D+L    + 
Sbjct: 423 ANRYFAGQEPWTLRKTDPARMGTVLYVTAETLRAIGILVQPFVPAAAAKLLDLLATPKQA 482

Query: 484 RCFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
           R    + +  RL PG  L     PIFPRF+
Sbjct: 483 RGLAQVGEGNRLVPGTALPAP-SPIFPRFV 511


>gi|319407220|emb|CBI80859.1| Methionyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 513

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 265/510 (51%), Positives = 367/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I++D LARF + DG +V F +GTDEHG K+ + A+
Sbjct: 2   RDIYYITTPIFYPNSAPHIGHAYNAIVSDTLARFQKADGKNVFFLSGTDEHGLKMQQTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  VL+ S +DFIRTTE+RHH  C+ LWKK+  KGDIY GC
Sbjct: 62  MLNITPQQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R E+YY + +     +G     +  +PV+W EEE YFFRLS Y+  LL YYE 
Sbjct: 122 YAGWYSVRQESYYEEKDTEIDQEGIRREKELGSPVEWNEEESYFFRLSRYEKALLQYYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+ISFVKSGLKD+S+SR TFDWGI++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDFIGPNERRNEIISFVKSGLKDISISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTGI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + +     K  FWPAD+H+IGKDI RFHAIYWPAFL+SA + LPK++F HGF+L++G K
Sbjct: 242 DFFNETS-KKRNFWPADVHIIGKDITRFHAIYWPAFLMSAEIELPKRIFVHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYF +REI  G+DG Y+ D    R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDRYGLDQVRYFFLREIPFGQDGSYNHDNFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ +  IPTP AF   DE +L    +VL+ +R+ M NQ  H AL+ + S+V+
Sbjct: 361 QRSLSMVEKNCNMKIPTPAAFLIQDEQLLKQSFQVLEVVRQTMSNQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K NP+R  TVLY+T+EV+R++ I+L  F+P+ A K+ D L +A+E
Sbjct: 421 DANRYFANEEPWSLRKNNPERFFTVLYITLEVLRRVGIMLLPFIPQSATKLLDSLAIAEE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D R+K G +L     PIFPR++
Sbjct: 481 DRLLHHISDLRIKEGTVLP-IPAPIFPRYI 509


>gi|313888600|ref|ZP_07822265.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845329|gb|EFR32725.1| methionine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 651

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 215/515 (41%), Positives = 320/515 (62%), Gaps = 10/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y++T I YP+   HIGH Y  +  D + RF  + G DV FTTGTDEHGQKI  
Sbjct: 1   MSNK-KFYVTTPIYYPSDNLHIGHTYCTVAVDCVKRFKTMQGYDVFFTTGTDEHGQKIED 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K +VD   +N + + +++DI YD F+R+T++ H    + +++K+ DKGDIY
Sbjct: 60  KAKEFGMEPKAYVDGIVKNIKKLWEIMDIDYDYFVRSTDEDHEKDVQEIFQKLYDKGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E+++ + ++    +G          +   EE YFFRLS Y+D+LL YY
Sbjct: 120 KGEYKGYYCKPCESFWTEAQLG---EGHTCPDCGRSTELTNEESYFFRLSKYKDRLLKYY 176

Query: 181 ESHPEFILPIERRNEVISFV---KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           E HPEFI P  R+NE++      +SGL+DLS+SR TFDWG+K+P DP++++YVWIDALT 
Sbjct: 177 EDHPEFIEPAFRKNEMVKNFFEGESGLEDLSVSRSTFDWGVKVPFDPKHVVYVWIDALTC 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  GY  + +     +WPAD+H +GK+I+RFH I WPA L++ +LPLP KVF HG+IL
Sbjct: 237 YLTAIGYGTDKE-KFNDYWPADVHFVGKEIIRFHVIIWPAILMALDLPLPDKVFGHGWIL 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              +K+SKS GNVI P  +I+  GVDAL+YFL+RE + G DG ++ +   +R+N+DLAN 
Sbjct: 296 FDNDKMSKSKGNVIYPEPIIKLYGVDALKYFLLREFSFGSDGSFNIEKFMQRLNSDLAND 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL+SR+VSMI K  DG+I   G   E D+ + ++   V+  + + M++     AL  +
Sbjct: 356 LGNLLSRTVSMIGKYNDGIIKDMGVREEVDDDLENLAVSVVDNVEKAMEHYEFSVALEAI 415

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+   ++Y D  +PW+L K     DR +TVLY   E +R +++L+  F+ + + KI +
Sbjct: 416 WKLIRRTNKYVDETEPWKLAKDEDKKDRLNTVLYNLAESLRIVSVLIYPFIKETSLKIRE 475

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L +  +     S    L P     +  + IFPR 
Sbjct: 476 QLGLDSKVSWEDSRVFGLLPDDTKVRKGEVIFPRL 510


>gi|330838376|ref|YP_004412956.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746140|gb|AEB99496.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 655

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 214/514 (41%), Positives = 325/514 (63%), Gaps = 11/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+  YI+T I YP+A+ HIGHAY   IAD +ARF RL   DV F TG+DEHGQKI + A
Sbjct: 2   TRKSFYITTPIYYPSAKLHIGHAYCTTIADAVARFKRLTDHDVFFLTGSDEHGQKIQQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT   +VD+    F+ +   L IS DDFIRTTE+RH    + ++++I +KGDIYKG
Sbjct: 62  EEEGVTPIAYVDKIVAGFQGLWQKLHISNDDFIRTTEERHQRVVQEVFRRIYEKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+Y+ + ++  G            V  +EE+ YFF++S Y D++L+Y E 
Sbjct: 122 KYKGLYCTPCESYWTERQLADGK----CPDCGREVAEVEEDAYFFKMSHYADRVLAYIEE 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P+ RRNE+I+F+K GL+DL +SR +FDWGI +P  P +++YVW DALTNYLT  
Sbjct: 178 NPDFIQPVSRRNEMINFIKQGLEDLCISRTSFDWGIPVPIAPDHVIYVWFDALTNYLTPI 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+LD+P+    K+WPAD+H++GK+I+RFH+I WP  L++ +LPLPK V+ HG+++  G+K
Sbjct: 238 GFLDDPE-KFEKYWPADVHLVGKEIVRFHSIIWPCILMALDLPLPKMVYGHGWLIVDGDK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+++I+E G DA+RYFL+REI  G+DG + +D L  R+NADLAN +GNL+
Sbjct: 297 MSKSKGNVVDPVQLIDEFGADAIRYFLLREINLGQDGNFSRDALITRINADLANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+++MI K  DG++      +E D + L+     +      M+   +  A+    + +S
Sbjct: 357 HRTLNMIGKFQDGVVEEARGESEIDRAFLADAESAIAAYEREMEEMKLQSAIKTTWAFIS 416

Query: 423 EVDRYFDAQKPW---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             ++Y D   PW   +         +  LY   E +R++++L++ F+P+ A KI+  L +
Sbjct: 417 RANKYIDETMPWALAKDAAAKKQELTNTLYNLAESLRRISVLIEPFMPETAAKIWHQLGM 476

Query: 480 ADENRCFQSLDQRLKPGFML---HKTFDPIFPRF 510
             +    +  D R   GF+      + + +FPR 
Sbjct: 477 EGDFSRVRFADVRTWGGFLAGTHVGSPEQLFPRI 510


>gi|312871229|ref|ZP_07731327.1| methionine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872811|ref|ZP_07732876.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091853|gb|EFQ50232.1| methionine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093243|gb|EFQ51589.1| methionine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 659

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 317/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSATEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|323351085|ref|ZP_08086742.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122809|gb|EFX94518.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 679

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 201/521 (38%), Positives = 318/521 (61%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +PT     T+ D ++  V ++ + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K +      + V+   V  +R +A +++ F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLVASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|294791589|ref|ZP_06756737.1| methionine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294456819|gb|EFG25181.1| methionine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 648

 Score =  448 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 314/515 (60%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPFEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY   DE ++ + ++              PV+ ++EE YFF+L  Y D+ L + E 
Sbjct: 124 EYEGWYCTPDETFWTEQKLGPNH---TCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V S + 
Sbjct: 361 NRTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIG 420

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L 
Sbjct: 421 RMNKYIDETMPWVLAKSEDAHDKVRLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLG 480

Query: 479 VAD-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +   E    +       L  G  + K  +PI+PRF
Sbjct: 481 LTGFEAATLEDAKTWGLLATGTKVVK-GEPIYPRF 514


>gi|324993726|gb|EGC25645.1| methionine--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 679

 Score =  448 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 201/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V S  + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+   V  +R +A +++ F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLVASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SQAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|259500883|ref|ZP_05743785.1| methionyl-tRNA synthetase [Lactobacillus iners DSM 13335]
 gi|302190664|ref|ZP_07266918.1| methionyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167577|gb|EEW52072.1| methionyl-tRNA synthetase [Lactobacillus iners DSM 13335]
          Length = 659

 Score =  448 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 206/521 (39%), Positives = 317/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|197119575|ref|YP_002140002.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197088935|gb|ACH40206.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 509

 Score =  448 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 218/509 (42%), Positives = 322/509 (63%), Gaps = 8/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA 
Sbjct: 2   KPAYYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFDVFFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T     D+  + F+ + + L+IS  DFIRTT++RH     +L++++ +KGDIY G 
Sbjct: 62  AAGETPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + ++            + P + ++EE YFFR+S YQD+LL++ E++
Sbjct: 122 YEDWYCTPCETFWTETQLID----YKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISFVK GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T  G
Sbjct: 178 PDFIQPKSRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    +  K+WP D+H+IGKDILRFH +YWP FL++A LP+PKKVF+HG+   +G+K+
Sbjct: 238 YPDEQG-NFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKKVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++
Sbjct: 297 SKSLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M+ K + G++  PG  T+ D +     + ++ ++   +++    RAL  +  ++S 
Sbjct: 357 RSTAMLGKYFGGVLQAPGEETDLDAAYREKTAAMIGQVDGFIEDLAFSRALQAIWEVISA 416

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R +TV+Y  +E  R +  LL AF+PK + K    L    
Sbjct: 417 GNKYIDETAPWTLAKDPEKRERLATVMYYMLESQRVVYSLLSAFMPKTSEKGLCCLGWPQ 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                      LKPG  + K  + +FPR 
Sbjct: 477 APDAGDLAWGGLKPGTPIAKA-EALFPRI 504


>gi|313902248|ref|ZP_07835654.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467478|gb|EFR62986.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 689

 Score =  448 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 223/515 (43%), Positives = 306/515 (59%), Gaps = 12/515 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R + YI+T I YPN + HIGH Y  + AD LAR+HRL G +    TGTDEHGQKI +A
Sbjct: 21  RGRGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDETWLLTGTDEHGQKIERA 80

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG     ++D      R +   L ISYDDFIRTTE RH    + +++++ DKGDIYK
Sbjct: 81  ARQAGKEPLEYIDPIVEATRQLWQRLHISYDDFIRTTEPRHKARVQQIFQRLYDKGDIYK 140

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G Y    EAYY + E+    DG        PV+ ++EE YFFRLS Y + LL + E
Sbjct: 141 GVYEGLYCTACEAYYTEAEL---LDGGRCPVHETPVERLQEESYFFRLSRYAEPLLEHIE 197

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP FI P  RRNEVI+F++ GL+DLS+SR +F WGI +P DP +++YVWIDAL NY+T 
Sbjct: 198 RHPGFIQPPSRRNEVIAFIRQGLQDLSVSRTSFRWGIPVPFDPDHVIYVWIDALANYITA 257

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+         +FWPAD+H+IGKDILRFHAI WPA L++   PLP+ V+ HG++L  G 
Sbjct: 258 LGW--PDGELYRRFWPADVHLIGKDILRFHAIIWPALLMALGEPLPRCVYGHGWLLIDGG 315

Query: 302 KISKSL--GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           KI KS   G VIDP+++IE+ GVD +RYFL+RE+  G DG Y ++ L +R+N DLAN +G
Sbjct: 316 KIGKSRAGGQVIDPVQLIEKYGVDPVRYFLLREVPFGDDGSYSEEALVRRLNTDLANDLG 375

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL  R+  MI +  DG IP P A   SD  + +        + + +    +  AL  +  
Sbjct: 376 NLAWRTTGMIQRFLDGRIPRPPA-GASDGVLAAAARETAARVEQALDRFDLPAALQAIWD 434

Query: 420 LVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L+   ++Y D Q PW L++    DR   VLY   E  R + +LL  F+ +   +++  L 
Sbjct: 435 LIGRANKYIDEQAPWALRREGRQDRLEAVLYDVAETARVVGVLLSPFLVETPARLWTQLG 494

Query: 479 VADENRCF---QSLDQRLKPGFMLHKTFDPIFPRF 510
           +  + R     Q L+    P         P+FPR 
Sbjct: 495 LGPDYRPAGWQQGLEWGQLPAGARVVRDQPLFPRI 529


>gi|319404210|emb|CBI77803.1| Methionyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 513

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 260/510 (50%), Positives = 367/510 (71%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN+ PHIGHAY  I++D LARF + DG +V F +GTDEHG K+ + A+
Sbjct: 2   RDIYYITTPIFYPNSAPHIGHAYNAIVSDTLARFQKADGKNVFFLSGTDEHGLKMQQTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M  VL+ S +DFIRTTE+RHH  C+ LWKK+  KGDIY GC
Sbjct: 62  MLNITPQQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGC 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+R E+YY + +     +G     +  +PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YAGWYSVRQESYYEEKDTEVDQEGVRREKELGSPVEWNEEESYFFRLSRYEKALLQHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P ERRNE+ISFVKSGLKD+S+SR TFDWGI++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDFIGPNERRNEIISFVKSGLKDISISRTTFDWGIRVPGNPKHVMYVWVDALTNYLTGI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + +     K  FWPAD+H+IGKDI RFHAIYWPAFL+SA + LPK++F+HGF+L++G K
Sbjct: 242 DFFNETS-KKRNFWPADVHIIGKDITRFHAIYWPAFLMSAEIELPKRIFAHGFLLNRGAK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYF +RE+  G+DG Y+ D    R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDCYGLDQVRYFFLREVPFGQDGSYNHDNFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+ +  +PTP AF   DE +L    +VL+ +R+ M NQ  H AL+ + S+V+
Sbjct: 361 QRSLSMVEKNCNMKVPTPAAFLIQDEQLLKQSLQVLEVVRQTMSNQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +RYF  ++PW L+K NP+R  TVLY+T+EV+R++ I+L  F+P+ A K+ D L +A+E
Sbjct: 421 DANRYFANEEPWSLRKNNPERFFTVLYITLEVLRRIGIMLLPFIPQSATKLLDSLAIAEE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           +R    + D ++K   +L     PIFPR++
Sbjct: 481 DRLLHHISDLKIKEETVLPPPV-PIFPRYI 509


>gi|170016653|ref|YP_001727572.1| methionyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803510|gb|ACA82128.1| Methionyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 705

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 312/522 (59%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G  V F TGTDEHG KI +
Sbjct: 33  VQKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEQVHFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG +   ++D  ++  +D+  ++DISYDDFIRTTE+RH    + ++  + +KGDIY
Sbjct: 93  KAEAAGTSEIAYLDGMAKQIKDLWQLMDISYDDFIRTTEERHEKAVQKIFNTLFEKGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY    G+    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYHDDAGKMIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+     GL+DL+++R   DWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +      KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALSNYITALGYDSDNTDLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNVI P  +    G+DA+RY+L+R +  G DG +  +    RVN D
Sbjct: 333 GWLVMKDGKMSKSKGNVIYPEVLEARYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNFD 392

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G++P      T+ DE ++      + +     Q+     
Sbjct: 393 LANDLGNLLNRTVAMINKYEHGVVPELHTGKTDFDEDLVRTVEDAIADYNRYFQDMRTAD 452

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +++   ++Y D  +PW L K +  +   S V+      +R +A+LLQ  + +  
Sbjct: 453 ALESVWTIIRRANKYIDETQPWVLAKDDTQKVVLSNVMAHLAAALRVVAVLLQPVLTQAP 512

Query: 471 NKIFDILFVA-DEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
            KI++ L     EN  R       +L  G  + K  +PIFPR
Sbjct: 513 KKIYEQLGFTYPENGVRIAGLTFGKLPTGGTVVKKGEPIFPR 554


>gi|291166390|gb|EFE28436.1| methionine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 642

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 207/512 (40%), Positives = 323/512 (63%), Gaps = 9/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YP+ + HIGH Y  + AD ++R+ R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKKTFYVTTPIYYPSGRLHIGHTYTTVAADAISRYKRFAGFDVRFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+   +++D    + + + +V++ISYDDFIRTTE RH +  + +++K+ D+GDIY G
Sbjct: 62  REMGLEPIIYLDNMISDIKKLWNVMEISYDDFIRTTESRHEERVQKIFQKLYDQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  EA++ + ++    +       H  V+  +E+ YFFRLS YQD+L+ YYE 
Sbjct: 122 EYEGHYCVECEAFWTESQL----EDNKCPDCHREVESKKEQSYFFRLSKYQDRLIEYYEQ 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+F  P  R+NE+++   K GL+DLS+SR +FDWG+K+P D ++++YVWIDAL NY+T 
Sbjct: 178 HPDFCFPESRKNEMLNNFLKKGLEDLSVSRTSFDWGVKVPFDERHVIYVWIDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY DN       +WPA++ ++GK+I+RFH I WPA L++ +LPLP+KV+ HG+IL   +
Sbjct: 238 LGYPDNTK-EMQAYWPANMQIVGKEIMRFHTIIWPALLMALDLPLPQKVYGHGWILFSDD 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+DAL+YFL+RE   G+DG Y   G   R+N+DL N +GNL
Sbjct: 297 KMSKSKGNVVYPEPIIERYGIDALKYFLLREFVFGQDGNYTNRGFLTRINSDLVNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+VSM+ K  DG++    A TE DES+ ++ + + ++  E M+N   + A  ++  LV
Sbjct: 357 LSRTVSMVEKYTDGIVMEYNASTEFDESLETIINELFEKFDEAMENMQFNEAFEELWKLV 416

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW+L K +   +   +VLY  +E +R +A+ L+  +   ++KI + + +
Sbjct: 417 RRANKYIDETMPWKLAKDDTKQEELRSVLYHLIETLRVVAVFLRPMLTITSDKILEQINI 476

Query: 480 ADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             E     S+      P     K  + +FPR 
Sbjct: 477 PVEEATLDSVKVFGGYPFETKVKRGENLFPRL 508


>gi|296111172|ref|YP_003621553.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832703|gb|ADG40584.1| methionine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 703

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 207/522 (39%), Positives = 314/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVHFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++   ++D  +++ + +  ++DISYDDFIRTTE RH    + ++  + +  DIY
Sbjct: 93  KAQAAGISEIDYLDGMAKDIKTLWSLMDISYDDFIRTTEDRHEKAVQKIFTTLLENDDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EV++  DG     +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVFRDEDGNMIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY+SHPEFI P  R NE+I+     GL+DL+++R + DWGI +P D ++++YVWID
Sbjct: 213 WLLEYYKSHPEFIQPEARMNEMINNFIAPGLEDLAVTRASVDWGIPVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +   +  KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALSNYITALGYDSDNTEAFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNVI P  +    G+DA+RY+L+R +  G DG +  +    RVN D
Sbjct: 333 GWLVMKDGKMSKSKGNVIYPEVLEARYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNFD 392

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K   G++P      T+ DE ++      +    +N +      
Sbjct: 393 LANDLGNLLNRTVAMINKYEGGVVPQLQTGQTDFDEDLVRTVEEAIVSYNQNFKALRTAD 452

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V  ++   ++Y D  +PW L K +  +A  S V+      +R +A+LLQ  + +  
Sbjct: 453 ALENVWVIIRRANKYIDETQPWVLAKDDTQKAILSNVMAHLAGALRIVAVLLQPVLTQAP 512

Query: 471 NKIFDILFVA-DEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
            KI++ L     EN  R       +L  G  + K  +PIFPR
Sbjct: 513 RKIYEQLGFEYPENGVRIAGLTFGQLPTGGKVVKKGEPIFPR 554


>gi|315654035|ref|ZP_07906951.1| methionine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315488731|gb|EFU78377.1| methionine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 659

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 205/521 (39%), Positives = 316/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D
Sbjct: 121 LGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWID
Sbjct: 181 RLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F H
Sbjct: 241 ALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN D
Sbjct: 301 GWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFD 360

Query: 354 LANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R++SMI +  D  + P      E  + +  + +  +    E M      +
Sbjct: 361 LANDLGNLLNRTISMINQYQDGWVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +   
Sbjct: 421 ALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAEGLRLIALLIRPIMTQSPV 480

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 481 HIFEQLGLSLDDANATSLCWGAY-GWQNYVTKNPKPIFPRL 520


>gi|222055242|ref|YP_002537604.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564531|gb|ACM20503.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 509

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 219/506 (43%), Positives = 319/506 (63%), Gaps = 8/506 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ RL G +V F TGTDEHGQK+ KAA  AG
Sbjct: 5   FYVTTPIYYVNDVPHIGHAYTTLAADVLARYRRLKGYEVFFLTGTDEHGQKVEKAANAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +   D+  + F+ + + LDISY DFIRTT++RH      ++K + +KGDIY G Y  
Sbjct: 65  ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVSKIFKDVMEKGDIYLGEYED 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++            + P + ++EE YFFR+S YQ++LL++ E++P+F
Sbjct: 125 WYCTPCETFWTETQLID----YKCPDCNRPTEKLKEESYFFRMSKYQEQLLAHIEANPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ISFVK GL+DLS+SR TF WGI +P + ++I+YVW DAL NY+T  GY +
Sbjct: 181 IQPKSRRNEIISFVKEGLRDLSVSRTTFSWGIPVPGNDKHIIYVWFDALANYITALGYPE 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
               +  KFWP D H+IGKDILRFHA+YWP FL++A LPLPKKVF+HG+   +G+K+SKS
Sbjct: 241 ESG-NFDKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPLPKKVFAHGWWTIEGQKMSKS 299

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           L NV++P  ++E+ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++RS 
Sbjct: 300 LQNVVEPNMLVEKYGVDAVRYFLLREVPFGLDGDFSHSALVHRINSDLANDLGNLLNRST 359

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K + G +  P   T+ D +       +++++  +++     +AL  +  +VS  ++
Sbjct: 360 AMLNKYFGGTVQAPADLTDMDLAYQEKTREMVRQVDMHLEELAFSKALQAIWEVVSAGNK 419

Query: 427 YFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K     +R +TV+Y  +E  R +  L+ AF+P+ A K    L V D   
Sbjct: 420 YIDETAPWTLAKDPVQKERLATVMYCLLESQRIVYQLVSAFMPQTAVKALSYLGVTDAPN 479

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   L+ G  + K  + +FPR 
Sbjct: 480 ENGLRWGGLESGTQVTKA-EALFPRI 504


>gi|169351609|ref|ZP_02868547.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552]
 gi|169291831|gb|EDS73964.1| hypothetical protein CLOSPI_02389 [Clostridium spiroforme DSM 1552]
          Length = 638

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 209/517 (40%), Positives = 324/517 (62%), Gaps = 13/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAI Y + +PHIG+ YE+I+AD +ARF R +G +V F TGTDEHGQKI  
Sbjct: 1   MKNEKDYYLTTAITYTSGKPHIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + FVD+ +   + + D++D +YD F+RTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAKEAGIPPQQFVDEKAAEVKRIWDLMDTTYDRFMRTTDEYHKKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y    E+++ + ++  G           PV   +EE YFF+LS Y D+L+ + 
Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGK----CPDCGGPVNDAKEEAYFFKLSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E HPEFI P+ R+NE+++   K GL+DL +SR +F W I +  DP++++YVWIDALTNY+
Sbjct: 177 EKHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDALTNYI 236

Query: 240 TTTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K+WPADLH+IGKDI+RFH IYWP  L++ ++PLPK+VF H ++L
Sbjct: 237 TGLGYDVDGNHGELYKKYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+RY+++ EI    DG    D L +++N+DLAN 
Sbjct: 297 QGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPYDNDGSITWDLLVEKINSDLANV 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R++SM  K +DG++  P  +   DE ++++   + +++   M +     AL  +
Sbjct: 357 LGNLVNRTISMSNKYFDGIVNNPKVYEPVDEELINIALEMPKKVINKMDDFKSSDALDAI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L+   ++Y D   PW L K     +R +TVLY  +E IR  AI L  F+P  ANKI D
Sbjct: 417 FTLLRRTNKYIDETMPWALAKDESKKERLATVLYNLIESIRFSAIALIPFIPSTANKILD 476

Query: 476 ILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            +    + R +Q+L++    K G  + +  + +F R 
Sbjct: 477 QINT--DQRDYQTLNEFGAYKEGTKVTEKPEILFARL 511


>gi|325690672|gb|EGD32673.1| methionine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 679

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 200/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V S  + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K +      + V+      +R +A +++ F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLAASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKSVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|253699686|ref|YP_003020875.1| methionyl-tRNA synthetase [Geobacter sp. M21]
 gi|251774536|gb|ACT17117.1| methionyl-tRNA synthetase [Geobacter sp. M21]
          Length = 509

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 220/509 (43%), Positives = 322/509 (63%), Gaps = 8/509 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y++T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TGTDEHGQK+ KAA 
Sbjct: 2   KPAYYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFDVFFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T     D+  + F+ + + L+IS  DFIRTT++RH     +L++++ +KGDIY G 
Sbjct: 62  AAGETPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  WY    E ++ + ++            + P + ++EE YFFR+S YQD+LL++ E++
Sbjct: 122 YEDWYCTPCETFWTETQLID----YKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P  RRNE+ISFVK GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T  G
Sbjct: 178 PDFIQPKSRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D    +  K+WP D+H+IGKDILRFH +YWP FL++A LP+PKKVF+HG+   +G+K+
Sbjct: 238 YPDEAG-NFGKYWPCDVHLIGKDILRFHTVYWPTFLMAAGLPIPKKVFAHGWWTVEGQKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  ++++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++
Sbjct: 297 SKSLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS +M+ K + G++  PG  TE D +     + ++ ++   +++    RAL  V  ++S 
Sbjct: 357 RSTAMLGKYFGGVLQAPGEETELDAAYREKTAAMIGQVDGFIEDLAFSRALQAVWEVISA 416

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K     +R +TV+Y  +E  R +  LL AF+PK + K    L    
Sbjct: 417 GNKYIDETAPWTLAKDPEKRERLATVMYYMLESQRVVYSLLCAFMPKTSEKGLCCLGWPK 476

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                      LKPG  + K  + +FPR 
Sbjct: 477 AAEAADLAWGGLKPGTSIAKA-EALFPRI 504


>gi|163784145|ref|ZP_02179086.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880589|gb|EDP74152.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 633

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 216/507 (42%), Positives = 311/507 (61%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  + ADVLAR++R  G+   F TGTDEHG KI K+A+ 
Sbjct: 3   DKFYITTPIYYVNDVPHIGHAYTTVAADVLARYNRQKGIKTFFLTGTDEHGLKIQKSAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   DQ  + F+++  VL+ISYD FIRTT++ H    + +++K  + GDIY G Y
Sbjct: 63  KGITPKELADQTHQKFKELWQVLNISYDRFIRTTDEDHIKAVQYIFQKCYENGDIYLGKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E +  + E+                + + EE YFFRLS Y DKLL  YE +P
Sbjct: 123 EGWYCVGCEEFKTETEIKDLD--YKCPIHQKKCEKIVEESYFFRLSKYTDKLLKLYEKNP 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EFI P  RRNEV+SFVK GLKDLS+SR      WGI +P D  + +YVW DALTNYLT  
Sbjct: 181 EFIQPDYRRNEVVSFVKQGLKDLSVSRKRDRVKWGIPVPFDENHTIYVWFDALTNYLTAV 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D        FWPAD+H++GKDILRFHA+YWPAFL+SA L +P+KVF+HG+   +G+K
Sbjct: 241 GYPDTESELFKTFWPADVHIVGKDILRFHAVYWPAFLMSAGLEIPEKVFAHGWWTVEGKK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP + ++  GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GNL+
Sbjct: 301 MSKSLGNVVDPFKAVKSYGVDELRYFLMREVPFGLDGDFSKSAVIGRINSDLANDLGNLI 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS++MI K   G++     +T+ ++    +    ++ + ++++N   +++L  +   + 
Sbjct: 361 SRSLTMINKFKKGIVECGEKYTDLEKEYKEIYLYTVENVDKHLKNLEYNKSLELIWEFID 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +++Y    +PW LKK+      T LYV  + I  +  LL  F+P    +  ++L + + 
Sbjct: 421 FLNKYIVKTEPWALKKSQDPYLDTTLYVLADGIYAIIWLLSPFMPDKMKEALNMLGLEEF 480

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               +  +     G  + K   P+FPR
Sbjct: 481 TYIPEPFN--FPSGTKIAKKIKPLFPR 505


>gi|15827034|ref|NP_301297.1| methionyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|25009393|sp|Q9CD55|SYM_MYCLE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13092581|emb|CAC29746.1| putative methionyl-tRNA synthase [Mycobacterium leprae]
          Length = 537

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 249/512 (48%), Positives = 354/512 (69%), Gaps = 7/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              YI+TAIAYPNA PHIGHAYE I  D +ARF RLDGLDV F TGTDEHG K+A+AA+ 
Sbjct: 2   RPYYITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVRFLTGTDEHGLKVAQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV T     +NS  F+ M + L IS+D FIRTT+  H+   + +W+++   GDIY G Y
Sbjct: 62  AGVPTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEG-YFFRLSAYQDKLLSYYES 182
           SGWYS+RDE ++ D E     +G     +    V W E+E  YFFRLSAY DKLL++Y++
Sbjct: 122 SGWYSVRDERFFVDSETKLLDNGIRVAVETGTLVTWTEKEQTYFFRLSAYVDKLLAHYDA 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNEVISFV  GL+D S+SR +FDWG+++P+ P ++MYVWIDALTNYLT  
Sbjct: 182 NPDFIGPEVRRNEVISFVSGGLEDFSISRTSFDWGVQVPEHPDHVMYVWIDALTNYLTGA 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D       ++WPA+LH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ + GEK
Sbjct: 242 GFPDTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNHGEK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GN++DP+ +++  GVD +RYFL+REI  G+DG Y ++ +  R+N DLAN  GNL 
Sbjct: 302 MSKSVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLA 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SM+ K+  G++P P  FT +D ++L+    +L+ +R N   Q ++ AL  +  ++ 
Sbjct: 362 QRSLSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLG 421

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           E ++YF +Q+PW L+K+    +  R  TVLY T EV+R  A+L+Q  +P+ A K+ D+L 
Sbjct: 422 EANKYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLG 481

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++ R F ++  RL PG +L      +FPR+
Sbjct: 482 QEEDQRAFTAVSVRLAPGTVLP-PPTGVFPRY 512


>gi|269797679|ref|YP_003311579.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094308|gb|ACZ24299.1| methionyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 648

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 315/515 (61%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQELFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY   DE ++ + ++              PV+ ++EE YFF+L  Y D+ L + E 
Sbjct: 124 EYEGWYCTPDETFWTEQKLGPNH---TCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D  + ++  + +++    M+N  +++A+  V S + 
Sbjct: 361 NRTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTVKDFEATMENMELNKAIKIVWSFIG 420

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K+    +  R  + +Y   E +R +AIL+   +P  A KI++ L 
Sbjct: 421 RMNKYIDETMPWVLAKSEDAHDKVRLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLG 480

Query: 479 VAD-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +   E    +       L  G  + K  +PI+PRF
Sbjct: 481 LTGFEAATLEDAKTWGLLATGTKVVK-GEPIYPRF 514


>gi|317054912|ref|YP_004103379.1| methionyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447181|gb|ADU20745.1| methionyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 651

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 202/513 (39%), Positives = 309/513 (60%), Gaps = 13/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI+TAIAY + +PHIG+ YE++  D +ARF R+ G DV F TGTDEHG KI   A+
Sbjct: 3   KEKFYITTAIAYASKKPHIGNTYEVVFTDAIARFKRMQGYDVFFLTGTDEHGMKIEGLAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K  VD+ +   +D+   ++ISYD FIRTT+++H    + ++ K+ ++GDIYKG 
Sbjct: 63  EEGISPKEHVDKVAGEIKDICKCMNISYDGFIRTTDEQHEKVVQKIFNKLYEQGDIYKGS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++   ++  G            V+   EE YF +LS YQ  L  Y E+H
Sbjct: 123 YEGMYCVPCESFWTQSQLVDGK----CPDCGREVKPAHEEAYFLKLSKYQQWLEDYIETH 178

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+FI+P  R+ E+++   K GL+DL +SR TF W I +  DP++++YVWIDAL+NY+T  
Sbjct: 179 PDFIVPESRKKEMLNNFIKPGLQDLCVSRTTFTWSIPVTFDPKHVIYVWIDALSNYITAL 238

Query: 243 GYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY  +       K+WP D HVIGKDI+RFH+IYWP  L +  + +PKK+F H +IL   +
Sbjct: 239 GYDPDGSSEQFKKYWPCDCHVIGKDIMRFHSIYWPIMLHALGVEIPKKLFGHNWILFGED 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI   EV++  GVD  RY+L+ E+    DG    + L +R N+DLAN +GNL
Sbjct: 299 KMSKSKGNVIYADEVVDTFGVDGARYYLLSEMGLNGDGSITYESLIERYNSDLANTLGNL 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R+V+M  K + G I  P      D+ ++++     +++ + +    +  A+  +++L 
Sbjct: 359 VNRTVAMTKKYFGGEIRQPEVKEPVDDELIALAVETPKKVADLIDQYRMADAMEAIMTLA 418

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D  +PW L K      R STVLY  +E IR L ++L+AF+P+ + KI   +  
Sbjct: 419 RRANKYIDETEPWVLGKDEAKFGRLSTVLYNLLETIRFLGVILEAFMPETSEKILTQIGT 478

Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             + + F SL++   LK G  +     P+F R 
Sbjct: 479 --DVKGFDSLNEFGGLKVGSSVGDPV-PLFARI 508


>gi|300173823|ref|YP_003772989.1| methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888202|emb|CBL92170.1| Methionyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 703

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 208/522 (39%), Positives = 318/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VQKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+    ++D  ++  +D+  ++DISYDDFIRTTE+RH    + ++  + + GDIY
Sbjct: 93  KAKAEGIPEINYLDGMAKGIKDLWQLMDISYDDFIRTTEERHEKAVQKIFTTLLENGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+ AD +    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDADDKMIGGKAPSGHDVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+     GL+DL+++R   DWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGISVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY         KFWPA++ ++GK+I+RFH IYWP  L +  + LPK V  H
Sbjct: 273 ALSNYITALGYDSENTDLFEKFWPANVQLVGKEIVRFHTIYWPIMLHALGIELPKSVIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNVI P  + E  G+DA+RY+L+R +  G DG +  +    RVN D
Sbjct: 333 GWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNFD 392

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K  +G+IP      T+ DE+++      + +  +N Q+     
Sbjct: 393 LANDLGNLLNRTVAMINKYENGVIPELRTGKTDFDEALVRTSEDAITDYHKNFQDMRTAD 452

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  + +++   ++Y D  +PW L K +  +A  S V+      +R +A+LLQ  + K  
Sbjct: 453 ALENIWTIIRRANKYIDETQPWVLAKDDTQKAVLSNVMAHLAGALRVVAVLLQPVLTKAP 512

Query: 471 NKIFDILFVA-DEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
            KI++ L     EN  R       +L  G  + K  +PIFPR
Sbjct: 513 KKIYEQLGFEYPENGVRIAGLTFGKLPTGGTVVKKGEPIFPR 554


>gi|302384601|ref|YP_003820423.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195229|gb|ADL02800.1| methionyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 659

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 199/514 (38%), Positives = 310/514 (60%), Gaps = 9/514 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++  YI+TAIAY + +PHIG+ YE ++AD +AR+ R +G DV F TGTDEHGQKI + 
Sbjct: 5   SNKKPYYITTAIAYASGKPHIGNTYEAVLADAIARYKRAEGYDVFFQTGTDEHGQKIEEK 64

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+T K FVD+ +   R + D+++ SYD FIRTT+K H +  + ++KK+ ++ DIYK
Sbjct: 65  AEAAGITPKEFVDRAAGEIRKIWDLMNTSYDKFIRTTDKDHEEQVQKIFKKLYEQDDIYK 124

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G Y    E+++ + ++  G            V+  +EE YFFR+S Y D+L+ +  
Sbjct: 125 GYYEGLYCTPCESFFTESQLVDGK----CPDCGREVKPAKEEAYFFRMSKYADRLIKHIN 180

Query: 182 SHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +P+FI P+ R+NE+++     GL+DL +SR TF WGI +  DP+++ YVW+DALTNY+T
Sbjct: 181 ENPDFIQPVSRKNEMMNNFLLPGLQDLCVSRTTFQWGIPVSFDPRHVTYVWLDALTNYIT 240

Query: 241 TTGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY          +K WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L 
Sbjct: 241 GIGYDCDGQSREQFSKLWPADLHLIGKDIIRFHTIYWPIFLMALDIPLPKQVFGHPWLLQ 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+    +++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 301 GDGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGIISWELMVERMNSDLANIL 360

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R++SM  K ++G++    A    DE + +V    +++++E M+   +  A+  + 
Sbjct: 361 GNLVNRTISMSNKYFEGIVKDGKAAEAVDEDLKAVVLEEVKKVQEKMEKLRVADAMTSIF 420

Query: 419 SLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++    ++Y D   PW L K     +R  TVLY   E I   A LL +F+P  + KI   
Sbjct: 421 NIFRRSNKYIDETTPWTLAKDEASKERLETVLYNLTEAIAIGASLLDSFMPDTSKKILSQ 480

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L  +       +       G  +    + +F R 
Sbjct: 481 LNTSKRELSQMNEFGLYPSGNKVTDKPEILFARM 514


>gi|307243786|ref|ZP_07525918.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492840|gb|EFM64861.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 646

 Score =  446 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 212/516 (41%), Positives = 318/516 (61%), Gaps = 10/516 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIGHAY  I AD +ARF R  G DV F TGTDEHG+KI K
Sbjct: 1   MTSKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG +   F+D+     + + + L+IS DDFIRTTE+RH    + ++ K+ +KG+IY
Sbjct: 61  KAHEAGKSEIEFLDEQIAEIKKLWEKLEISNDDFIRTTEERHEKAIQKIFTKLYEKGEIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E+++ + ++ +G        +   V   +EE YFFRLS YQD  L   
Sbjct: 121 KGSYEGHYCVPCESFWTESQMLEGNKCPDCGRETKVV---KEESYFFRLSKYQD-RLMDL 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             + +F++P  R+NE+I    + GL+DLS++R +FDWGIK+P D ++I+YVW+DAL NY+
Sbjct: 177 FQNTDFVMPESRKNEMIKNFLEPGLEDLSVTRTSFDWGIKVPFDEKHIIYVWVDALCNYI 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + D +  KFWPAD+H++ K+I+RFH I WPA L++ ++P+PK+VF HG+IL  
Sbjct: 237 TALGYEGDDDTNYKKFWPADVHLVAKEIVRFHTIIWPALLMALDIPVPKRVFGHGWILFA 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P ++++  GVDAL+YFL+RE + G+DG Y       R+N+DLAN +G
Sbjct: 297 DDKMSKSKGNIVYPGQMVDRYGVDALKYFLLREFSFGQDGSYTHRNFINRINSDLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR++SM+ K  +G++    A TE D+ ++     V  +    M   + H AL  +  
Sbjct: 357 NLVSRTISMVEKYNEGVLVVNDAGTEFDQDLIDTYREVRADFEGQMNELMFHEALESLWK 416

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V   ++Y D   PW L K   N D+ + VLY   E IR ++ L+ + +P+ A KIFD L
Sbjct: 417 FVRRTNKYIDETMPWVLAKDEANKDQLNHVLYNLCESIRLISTLISSLLPETARKIFDQL 476

Query: 478 FVA--DENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
            +A  ++   + S D   L P     +  + +FPR 
Sbjct: 477 GIAGKEDLYDWASTDTFGLIPDGTKVEKGEVLFPRL 512


>gi|238019596|ref|ZP_04600022.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748]
 gi|237863794|gb|EEP65084.1| hypothetical protein VEIDISOL_01465 [Veillonella dispar ATCC 17748]
          Length = 648

 Score =  446 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 208/515 (40%), Positives = 314/515 (60%), Gaps = 11/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+A+ HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA
Sbjct: 4   TKKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T   +       F+ + + + IS DDF+RTTEKRH    + L+ K  +KGDIYK 
Sbjct: 64  EAQGITPLEYTTNIVNGFKALWEKMHISNDDFLRTTEKRHEKVVQELFTKAYEKGDIYKA 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E ++ + ++    +         PV+ ++EE YFF+L+ Y D+ L + E 
Sbjct: 124 EYEGWYCTPCETFWTEQKLG---ENHTCPDCGRPVEKVKEESYFFKLAKYTDQWLKFIEE 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  R NE+I FVK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++  
Sbjct: 181 NPDFIQPESRCNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
              D       K+WPADLH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K
Sbjct: 241 SPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVIDPI +I+  G D+LRY+L+ EI  G DG +       ++NADL+N +GNL+
Sbjct: 301 MSKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++MI K + G+I       + D  + ++  +  ++    M+N  +++A+  V + + 
Sbjct: 361 NRTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKSVWAFIG 420

Query: 423 EVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++Y D   PW L K+    +  R  + +Y   E +R +AI++   +P  A KI+D L 
Sbjct: 421 RMNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAIIVSPVIPVGAPKIWDQLG 480

Query: 479 V---ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +    D       +   +  G  + K  DPI+PRF
Sbjct: 481 LVGFTDATLEDAKVWGLIPTGTKVVK-GDPIYPRF 514


>gi|329770195|ref|ZP_08261585.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837001|gb|EGF86645.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 666

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 207/521 (39%), Positives = 316/521 (60%), Gaps = 13/521 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YP+   HIGHAY  +  D L R+ +L G D  F TGTDEHGQKI + A
Sbjct: 2   TKKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYDTFFLTGTDEHGQKIQQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G++ + +VD   ++ + +   +DI Y  FIRTT+  H      +++++ +KGDIY G
Sbjct: 62  QEKGISEQAYVDDMIKDIKKLWKAMDIDYSKFIRTTDDYHERAVAEIFERLVEKGDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EV++  +G          N V+ + EE YFF++S Y D+L
Sbjct: 122 EYQGWYSISDEEYFTETQLQEVFRDEEGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRL 181

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YY+ HPEFILP  R+NE+++   K GL+DL+++R TFDWG+K+  +P++++YVWIDAL
Sbjct: 182 VKYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY+T  GY          K+WPAD+ V+GK+I+RFH IYWP  L++ +LPLPKKVF+HG
Sbjct: 242 VNYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKVFAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+DA RY+L+RE+  G+DG +  +    R+N+DL
Sbjct: 302 WLLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLREVPFGQDGIFTPESFIDRINSDL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +N +GNL++R++SM+ K   G+IP      TE D+ ++ +   V+ E  E M+N    +A
Sbjct: 362 SNDLGNLLNRTISMVNKYCGGVIPKFVEPTTEFDKELIDLSKEVIAEYEEYMENMQFSKA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V   +S  ++Y D   PW L K   ++     V+    E +R   IL+   +     
Sbjct: 422 LESVWKFISRTNKYIDQTTPWILAKDEANKPELDKVMNYLAESLRITTILISPALTNAPK 481

Query: 472 KIFDILFVADENRCFQSLDQ-RLKPGF-MLHKTFDPIFPRF 510
           +I   L +++E   F+      +  G   + +   PIFPRF
Sbjct: 482 EIAKQLGISEELLTFEIAKTFGVFDGTVKVVEKPTPIFPRF 522


>gi|167042815|gb|ABZ07533.1| putative tRNA binding domain protein [uncultured marine
           microorganism HF4000_ANIW137I15]
          Length = 665

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 224/512 (43%), Positives = 317/512 (61%), Gaps = 11/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y++T I Y N  PHIGHAY  I ADVLARFHRL G  V   TGTDEHGQK+ +AA +
Sbjct: 3   ETFYVTTPIYYVNDYPHIGHAYTTIAADVLARFHRLAGTRVFLLTGTDEHGQKVERAALD 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+    +  + D L I  DDFIRTTE RH      L++++ +KGDIY G Y
Sbjct: 63  RGLTPQGLADRVVGRYHQLWDRLRIEPDDFIRTTEARHRKGVEDLFRRVQEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY   DE+++ + +V  G           PV+ + EE YFFR+S YQD+LL + E HP
Sbjct: 123 EGWYCTPDESFWTETQVVDGK----CPECGRPVERVREESYFFRMSKYQDRLLRHLEEHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FILP  RRNEVI FV+ GL+DLS+SR TF WGI +P    +++YVW DALTNY++  G+
Sbjct: 179 GFILPESRRNEVIRFVEGGLRDLSISRTTFQWGIPVPGGQGHVLYVWFDALTNYISALGF 238

Query: 245 LDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            +   G     FWPAD+H+IGKDILRFHA+YWP FL+SA LPLP++VF+HG+   +G+K+
Sbjct: 239 GEKNGGEGYETFWPADVHLIGKDILRFHAVYWPTFLMSAELPLPRRVFAHGWWTVEGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL NV++P  +++  G DA+RYFL+RE+  G+DG +  + L KR+N+DLAN +GNL+ 
Sbjct: 299 SKSLRNVVEPNRLLDRYGADAVRYFLLREVPFGQDGNFSHEALIKRINSDLANDLGNLLH 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M+ +   G +P      + +  +          +RE +++    R L +V   + +
Sbjct: 359 RTIGMVEQFCGGRLPRAAEVGDLERGLQQAAGATTAVLREELESLEFQRVLKKVWDFIRQ 418

Query: 424 VDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           V++Y DA+ PW L K+  +    T LY   E IR L++ L  F+P  A KI   L +A+E
Sbjct: 419 VNKYLDARAPWSLSKSGDEAGVRTTLYTAAEAIRVLSVWLWPFMPDAALKIRSRLGLAEE 478

Query: 483 N--RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +  R  +       L+ G  + +   P+FPR 
Sbjct: 479 DPPRSLEEARTWGVLEAGREV-QPGPPLFPRI 509


>gi|325679112|ref|ZP_08158706.1| methionine--tRNA ligase [Ruminococcus albus 8]
 gi|324109236|gb|EGC03458.1| methionine--tRNA ligase [Ruminococcus albus 8]
          Length = 659

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 192/515 (37%), Positives = 303/515 (58%), Gaps = 13/515 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI+T I YP+  PHIGH Y  +  D +AR+ R+ G DV+F TGTDEHGQKI   A++
Sbjct: 2   PKFYITTPIYYPSGDPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGQKIEDKARD 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT + +VD+    F+ +   ++ISYD +IRTT+  H ++ + ++K++ DKG IYKG Y
Sbjct: 62  KGVTPQQYVDEVVATFKKLWSYMNISYDRYIRTTDDYHVESVQKIFKELYDKGYIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G Y    E+++ + ++            H PV+   EE YFF++S + D++        
Sbjct: 122 TGKYCTPCESFWTESQLDAD---GCCPECHRPVKEASEEAYFFKMSPFADRIEKLLTETD 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
                      V +F+K GL+DL +SR +F WGI +  DP++++YVW+DAL+NY T  GY
Sbjct: 179 YLRPKTRATELVNNFIKPGLEDLCVSRTSFTWGIPVTFDPKHVVYVWVDALSNYCTALGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG---- 300
            +N      K+WPAD+H++ KDI+RFHAI WPA L++ + PLPK +  HG+I  +     
Sbjct: 239 KNNKYNDYDKYWPADVHMVAKDIMRFHAIIWPAILMALDEPLPKHLAVHGWITFQNKNGE 298

Query: 301 -EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKSLGNV+DP  + E  GVDA+RY ++RE+A G D  +  + +  R+N+DLANG G
Sbjct: 299 AQKMSKSLGNVVDPFMLGERYGVDAIRYHILREMALGADSAFSNEIMINRINSDLANGFG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+V+M  K + G +P      + D+S+      V +++ + +    +  AL ++  
Sbjct: 359 NLVSRTVAMADKYFGGTLPETRLEGDFDQSLKDCLLSVREKVDKCIDETRLKNALEEIFV 418

Query: 420 LVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V   ++Y D  +PW L K     DR ++VLY  +E IR ++ LL AF+P    ++++ +
Sbjct: 419 AVDRANKYIDETEPWVLGKDESKYDRLASVLYNLLESIRIISTLLSAFMPTTMPEVWEQI 478

Query: 478 FVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
               +   +++  +   L     +HK    +FPR 
Sbjct: 479 GANADICTYENAGKFGVLPANVTVHK-GRILFPRI 512


>gi|167760642|ref|ZP_02432769.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704]
 gi|167661767|gb|EDS05897.1| hypothetical protein CLOSCI_03024 [Clostridium scindens ATCC 35704]
          Length = 637

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 203/518 (39%), Positives = 307/518 (59%), Gaps = 31/518 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 2   DKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT K FVD  +   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  EEAGVTPKEFVDGVAGQIQTIWDLMNTSYDKFIRTTDADHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y D+L+ +  S
Sbjct: 122 YYEGMYCTPCESFFTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIEHINS 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITG 237

Query: 242 TGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY           K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK++F H ++L  
Sbjct: 238 IGYDCGGESTEQFKKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRAL 414
           NLV+R++SM  K +DG++       +      D  + +V     + +   M    +  A+
Sbjct: 358 NLVNRTISMTNKYFDGVVTDKKVADDEDAKAVDADLRAVTENTPKAVEAKMDELRVADAI 417

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++ +L    ++Y D   PW L K     DR  TVLY  +E I+  A+LL++F+P  + K
Sbjct: 418 TEIFNLFKRCNKYIDETMPWALAKDEDKKDRLETVLYNLLESIKAGAVLLESFMPDTSAK 477

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L                     +    + +F R 
Sbjct: 478 ILAQLG-----------------DGKVTDKPEILFARL 498


>gi|104773496|ref|YP_618476.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103422577|emb|CAI97180.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125127|gb|ADY84457.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 660

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 198/518 (38%), Positives = 302/518 (58%), Gaps = 10/518 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+ +  IG+AY  I AD + R+ +  G D  F TGTDEHG KI + A
Sbjct: 4   NKKTFYITTPIYYPSGRLTIGNAYTTIAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G
Sbjct: 64  EKLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLG 123

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+L
Sbjct: 124 EYTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ HPEFI P  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 184 LQYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG+
Sbjct: 244 ANYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLA
Sbjct: 304 VLIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+VSMI +     + P      +  + + +V ++ + +   NM       AL
Sbjct: 364 NDLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V  L+S  ++Y D   PW L K    +  S V+    E +R +AI++   + +   K+
Sbjct: 424 ENVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKM 483

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           F  L +  E+   + L          +     PIFPR 
Sbjct: 484 FAQLGLDWEDESQKDLQFGGFAWDVNVVAKPTPIFPRL 521


>gi|326693554|ref|ZP_08230559.1| methionyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 702

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 206/522 (39%), Positives = 314/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDQTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVFFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AGV+   ++D  +   + +  ++DISYDDFIRTTE RH    + ++  + +KGDIY
Sbjct: 93  KAKAAGVSEIAYLDGMAEQIKALWQLMDISYDDFIRTTEPRHEKAVQKIFTTLLEKGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+  +GQ    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDENGQVTGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+     GL+DL+++R   DWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTAVDWGIPVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +      K WPA++ ++GK+I+RFH IYWP  L +  + LPK +  H
Sbjct: 273 ALSNYITALGYDTDDTALFDKLWPANVQLVGKEIVRFHTIYWPIMLHALGIDLPKTIIGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNVI P  + E  G+DA+RY+L+R +  G DG +  +    RVN D
Sbjct: 333 GWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLRAMPFGNDGVFTPEDFVARVNFD 392

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K  +G++P      T+ DE ++      + +  ++ Q      
Sbjct: 393 LANDLGNLLNRTVAMINKYENGIVPELHTGKTDFDEGLVQTIEVAIVDYNKHFQAMRTAD 452

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +++   ++Y D  +PW L K    +A  S V+      +R  A+LLQ  + +  
Sbjct: 453 ALESVWTIIRRANKYIDETQPWVLAKDETQKAVLSNVMAHLAGALRVAAVLLQPVLTQAP 512

Query: 471 NKIFDILFVA-DEN--RCFQSLDQRLKPGFMLHKTFDPIFPR 509
            KI++ L     EN  +       +L  G  + K  +PIFPR
Sbjct: 513 KKIYEQLGFDYPENGVKIAGLTFGKLPTGGQVVKKGEPIFPR 554


>gi|116617428|ref|YP_817799.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096275|gb|ABJ61426.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 702

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 213/522 (40%), Positives = 317/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++   F+D  ++  +D+  ++DISYDDFIRTTE RH      ++ ++ + GDIY
Sbjct: 93  KAEAAGISEIDFLDGMAKQIKDLWKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+   G+    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDDAGKVIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+     GL+DL+++R +FDWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  +      KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVVGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNVI P  + E  G+DA+RY+L+R +  G DG +  +    RVN D
Sbjct: 333 GWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLRSMPFGNDGVFTPEDFVARVNYD 392

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K  DG+IP      T  DE ++      + E  +N +      
Sbjct: 393 LANDLGNLLNRTVAMINKYVDGVIPELLTGKTSFDEDLVRTVEDAIVEYNKNFKELRTAD 452

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V  ++   ++Y D  +PW L K   ++   S+V+      +R  A+LLQ  + +  
Sbjct: 453 ALESVWKIIRRANKYIDETQPWVLAKDENEKEVLSSVMAHLAGALRVTAVLLQPVLTQAP 512

Query: 471 NKIFDILFV--ADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
            KIFD L +  +D+      L   +L  G  + K  +PIFPR
Sbjct: 513 KKIFDQLGLDYSDKGVAIAGLTFSKLPTGGHVVKKGEPIFPR 554


>gi|116513491|ref|YP_812397.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116092806|gb|ABJ57959.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 660

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 302/518 (58%), Gaps = 10/518 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A
Sbjct: 4   NKKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G
Sbjct: 64  EKLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLG 123

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+L
Sbjct: 124 EYTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ HPEFI P  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 184 LQYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG+
Sbjct: 244 ANYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLA
Sbjct: 304 VLIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+VSMI +     + P      +  + + +V ++ + +   NM       AL
Sbjct: 364 NDLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V  L+S  ++Y D   PW L K    +  S V+    E +R +AI++   + +   K+
Sbjct: 424 ENVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKM 483

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           F  L +  E+   + L          +     PIFPR 
Sbjct: 484 FAQLGLDWEDESQKDLQFGGFAWDVNVVAKPTPIFPRL 521


>gi|218132714|ref|ZP_03461518.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992440|gb|EEC58443.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
           43243]
          Length = 676

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 208/517 (40%), Positives = 315/517 (60%), Gaps = 13/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++++K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI  
Sbjct: 27  MEDKKKYYITTAIAYTSGKPHIGNTYEIVLADSIARYKRQQGYDVFFQTGTDEHGQKIEL 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + FVD  S   + + D++D SY+ FIRTT+K H    + ++KK+ D+GDIY
Sbjct: 87  KAEEAGISPQEFVDNVSGEIKRIWDLMDTSYNKFIRTTDKYHEKQVQKIFKKLYDQGDIY 146

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    E+++   ++  G           P Q   EE YF +L  Y +KL+ + 
Sbjct: 147 KGFYEGMYCTPCESFFTASQLVDGK----CPDCGRPCQPAREEAYFLKLGKYTNKLIEHI 202

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           ESHPEFI P  R+NE+++   K+GL+DL +SR +F WGI +  D ++++YVW+DALTNY+
Sbjct: 203 ESHPEFIQPESRKNEMMNNFIKAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYI 262

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K+WPADLH+IGKDILRFH IYWP  L++  LPLPK++F H ++L
Sbjct: 263 TGLGYDVDGNSDENFNKYWPADLHLIGKDILRFHTIYWPIMLMALGLPLPKQIFGHPWLL 322

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    + + +R+N+DLAN 
Sbjct: 323 QGDGKMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANT 382

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+++M  K + G +    A T+ DE +  V +     I ++M    +  A+ ++
Sbjct: 383 LGNLVNRTIAMSNKYFGGDVNDTSATTDFDEDLKRVVTGTKALIDKDMDKLRVADAITEI 442

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     D  + VLY  VE I   A LL +++P+ A +I  
Sbjct: 443 FTLFKRCNKYIDETMPWALAKDESKQDELAHVLYNLVESITIGANLLTSYMPQTAGRILA 502

Query: 476 ILFVADENRCFQSLDQRL--KPGFMLHKTFDPIFPRF 510
            L    + R +  LD+    K G  +    + +F R 
Sbjct: 503 QLN--ADIREYDDLDKFGLRKNGIKVTDKPEILFARL 537


>gi|327462090|gb|EGF08419.1| methionine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 665

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 200/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD      +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSM+ K +DG IP      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMVNKYFDGQIPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K +      + V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDDSKVKELAAVMSHLAASLRVVAHMIKPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKSVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|325687041|gb|EGD29064.1| methionine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 679

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 200/521 (38%), Positives = 317/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D ++  V ++ + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQIPAYEEDVTDFDGALAQVAAQSIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V  L+S  ++Y D   PW L K     ++ ++V+      +R +A +++ F+ + 
Sbjct: 435 RALEAVWMLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 535


>gi|323136445|ref|ZP_08071527.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398519|gb|EFY01039.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 520

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 258/494 (52%), Positives = 340/494 (68%), Gaps = 6/494 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER    ISTAI Y N  PHIGHAYE I  D  ARF RLDG DVLF TG DEHGQK+ +
Sbjct: 1   MSERPTYMISTAIPYANGAPHIGHAYERIATDAFARFKRLDGYDVLFVTGMDEHGQKMQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+ +  F  M + L+   DD +RTT++RH +T   +W+++   GDIY
Sbjct: 61  TAEKEGLTPQGLADRTAAQFARMGEALNARADDIVRTTQERHKETVLEIWRRMEANGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEAYY++ E+ +  +G+ +     PV+W+EEE +FFRLSAY  KLL++Y
Sbjct: 121 LSKYSGWYSVRDEAYYDESELTER-EGKKFAPTGTPVEWVEEESWFFRLSAYAGKLLAHY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALT 236
           E++P+FI P   RNE+I+FVK GL DLS+SR TFDWGI IP  PQ    ++MYVW+DALT
Sbjct: 180 EANPDFITPEHYRNEIIAFVKRGLSDLSVSRTTFDWGIPIPPSPQTTANHVMYVWVDALT 239

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T TG+L      +A+FWPAD HVIGKDI RFHAIYWP+FLLSA  PLPK++  HGF+
Sbjct: 240 NYITATGWLTGKG-ERARFWPADAHVIGKDITRFHAIYWPSFLLSAGAPLPKQIVVHGFL 298

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +GEK+SKSLGNV+DP+E+ E  GVD LRYF +REI  G+DG Y  + +  R+NADLAN
Sbjct: 299 FSRGEKMSKSLGNVVDPLELAERYGVDQLRYFFLREIPFGQDGNYSHEAIVNRINADLAN 358

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL  RS+SMI K+  G +P  G  T++D  IL+  +  L + R  M +   H ALA+
Sbjct: 359 DLGNLAQRSLSMIGKNCAGAVPKKGELTDADRDILAQAAIALDKARTAMNDYAPHHALAE 418

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  +V+E +RYF  ++PW  KKT+P R  T+LYVT E +R+LAI LQ F+P  A K+ D+
Sbjct: 419 IFRVVAEANRYFAGEEPWSKKKTDPARMETILYVTAETLRRLAIPLQPFIPDAAGKLLDL 478

Query: 477 LFVADENRCFQSLD 490
           L V  + R F   D
Sbjct: 479 LGVGPDERDFAHAD 492


>gi|291520365|emb|CBK75586.1| methionyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 657

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 215/520 (41%), Positives = 317/520 (60%), Gaps = 14/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI  
Sbjct: 1   MGNKGNYYITTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG+T K FVD  S   + + D+++ SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAAEAGITPKEFVDNVSGQVKSIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y G Y    E+++ + ++  G            VQ  +EE YFF++S Y DKL+ Y 
Sbjct: 121 KSSYEGLYCTPCESFWTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADKLIDYI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+
Sbjct: 177 NTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYI 236

Query: 240 TTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + + S      WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L
Sbjct: 237 TGIGYECDGESSDQFKALWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLL 296

Query: 298 HK-----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
            K      +K+SKS GNVI   E+++  GVDA+RYF++ E+    DG      + +RVN+
Sbjct: 297 TKSADGGDDKMSKSKGNVIYADELVDFFGVDAVRYFVLHEMPFENDGAISWPLMVERVNS 356

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           DLAN +GNLV+R++SM  K + G++   G   E D  + +VC+  +  + + M +  +  
Sbjct: 357 DLANTLGNLVNRTISMSNKYFGGVVEDKGVAEEVDADLKAVCTGTVTAVEKKMADLRVAD 416

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V +L    ++Y D   PW L K     DR +TVLY  VE I   A LL+AF+P+ +
Sbjct: 417 AITEVFNLFKRCNKYIDETMPWALAKDEAKKDRLATVLYNLVEGISIGATLLKAFMPETS 476

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            KI   +   +      +       G  + +T + +F R 
Sbjct: 477 EKILAQIGAEEIPYDELATFGHYTNGNKVTETPEILFARL 516


>gi|328946604|gb|EGG40742.1| methionine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 665

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 311/521 (59%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ +G++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEESGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V S  + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVASESIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+   V  +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLVASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SQAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|313123059|ref|YP_004033318.1| methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279622|gb|ADQ60341.1| Methionyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 660

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 302/518 (58%), Gaps = 10/518 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A
Sbjct: 4   NKKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G
Sbjct: 64  EKLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLG 123

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+L
Sbjct: 124 EYTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ HPEFI P  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 184 LQYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG+
Sbjct: 244 ANYITALGYGLEDDTLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLA
Sbjct: 304 VLIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+VSMI +     + P      +  + + +V ++ + +   NM       AL
Sbjct: 364 NDLGNLLNRTVSMINQYQKGLVAPVDQEQDKYGQDLAAVAAKAISDYYGNMDKMHFSNAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V  L+S  ++Y D   PW L K    +  S V+    E +R +AI++   + +   K+
Sbjct: 424 ENVWQLISRANKYIDETTPWVLNKEGKTEELSRVMSNLAESLRLVAIMIAPVMTETPGKM 483

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           F  L +  E+   + L          +     PIFPR 
Sbjct: 484 FAQLGLDWEDESQKDLQFGGFAWDVNVVAKPTPIFPRL 521


>gi|238925543|ref|YP_002939060.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238877219|gb|ACR76926.1| methionyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 673

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 210/512 (41%), Positives = 317/512 (61%), Gaps = 17/512 (3%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           +TAIAY + +PHIG+ YE+I+AD +AR+ R +G DV F TGTDEHGQKI + A+ AG++ 
Sbjct: 2   TTAIAYTSGKPHIGNTYEIILADAIARYKRAEGYDVYFQTGTDEHGQKIQEKAEAAGISP 61

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           K +VDQ S   + + D+++ SYD+F+RTT++ H    + ++KK+ D+GDIYKG Y G Y 
Sbjct: 62  KEYVDQISGEVKRIWDLVNSSYDNFVRTTDEDHEKCVKKIFKKLYDQGDIYKGSYEGLYC 121

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
              E+++ + ++  G            VQ  +EE YFF++S Y D+L+ Y  +HP+FI P
Sbjct: 122 TPCESFWTESQLVDGK----CPDCGREVQPAKEEAYFFKMSKYADRLIDYINTHPDFIQP 177

Query: 190 IERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           + R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  GY  + 
Sbjct: 178 VSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITKIGYDPDG 237

Query: 249 DGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                 K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  G+K+SKS 
Sbjct: 238 SSELFKKNWPADLHLIGKDIVRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGGDKMSKSK 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI   +++   GVDA RYF++ E+    DG    D + +R N+DLAN +GNLV+R+VS
Sbjct: 298 GNVIYADDMVRLFGVDATRYFVLHEMPFENDGIITWDLVIERFNSDLANILGNLVNRTVS 357

Query: 368 MILKDYDGMIPTPGAFTESDE-----SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           M  K +DG++ + GA  ++D+      + +V +    ++ + M+   +  A+ +V +L  
Sbjct: 358 MSNKYFDGIVKSTGATGDADQTAIDADLKAVVTGTRDKVAKKMEGLRVADAITEVFALFR 417

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K     DR + VLY   E I   A LL +F+P+ A KI   L   
Sbjct: 418 RCNKYIDETTPWVLAKDEAQQDRLAEVLYNLTESITIGASLLHSFLPETAEKIVAQLNTT 477

Query: 481 DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
              R F  LD     + G  +    + +F R 
Sbjct: 478 --LREFDDLDKFGLYESGTKVTDKPEILFGRL 507


>gi|310778457|ref|YP_003966790.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747780|gb|ADO82442.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 637

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 214/514 (41%), Positives = 306/514 (59%), Gaps = 13/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+G AY  I ADV+AR+ +  G DV F TGTDEHGQK+ + A+ 
Sbjct: 3   KNFYVTTPIYYVNGDPHVGSAYTTIAADVIARYKKTMGYDVFFLTGTDEHGQKVEETARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D+ +  F DM ++L++S+DDFIRTT+ RH      + KK+ +KGDIYKG Y
Sbjct: 63  KGFTPQEWTDKMAPRFEDMWNLLNVSHDDFIRTTQIRHKKAVTKILKKVYEKGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y  ++++               V   +EE YFF++S YQD LL + E HP
Sbjct: 123 EGKYCVSCETYVPENQIVGENGCPDCGKDLRVV---KEESYFFKMSKYQDALLEHIEKHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEVISFVK GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY
Sbjct: 180 DFILPHSRKNEVISFVKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +N D    KFW     +H++GKDILRFHAI WP  LL+A   LP K+ +HG+   +GEK
Sbjct: 240 ENNLDM-FQKFWNDGEVVHLLGKDILRFHAIIWPCMLLAAEEKLPDKIVAHGWWTVEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP    E  G D  RYFL+RE+  G DG Y    +  R+NADLAN +GNL+
Sbjct: 299 MSKSKGNVIDPQAETERYGRDPFRYFLMREVHFGNDGDYSTTSMVNRINADLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++  +         D+ I  +    L+ + ++M      +AL  +   +S
Sbjct: 359 NRTLGMYKKYFNSTVVKGTGHQIYDDQIKELWKETLESVEKSMSKLEFSKALEAIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K      R + V+   VE + ++A+L+  ++P+ A KI++ L  +
Sbjct: 419 RMNKYIDETMPWALAKDEDKKPRLAVVMNNLVEALYKVAVLVYPYMPESAQKIWEQLGFS 478

Query: 481 DENRCFQ----SLDQRLKPGFMLHKTFDPIFPRF 510
           ++ +  +    S  + +K G  L +   PIFPR 
Sbjct: 479 EDIKDAKLSVVSPWEVIKEGHNLGEA-KPIFPRI 511


>gi|108801230|ref|YP_641427.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870381|ref|YP_940333.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126437210|ref|YP_001072901.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|108771649|gb|ABG10371.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696470|gb|ABL93543.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126237010|gb|ABO00411.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 515

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 242/511 (47%), Positives = 343/511 (67%), Gaps = 6/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAIAYPN  PH+GHAYE I  D +ARF RLDG DV + TGTD HGQK+A+ A  
Sbjct: 3   QPFYITTAIAYPNGDPHVGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETATA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV       +NS  F+ + + L+IS+D FIRT++  H+     +W++++  GDIY   Y
Sbjct: 63  LGVPVADLARRNSDVFQRLQEKLNISFDRFIRTSDTDHYRASEDIWQRMNAAGDIYLDAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWYS+RDE ++ + E     DG     +   P+ W EE+ YFF+LSAY D+LL++YE+H
Sbjct: 123 SGWYSVRDERFFTEGETTLREDGVRIATETGAPLTWTEEQTYFFKLSAYTDRLLAHYEAH 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           PEFI P  RRNE++SFV  GL+DLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT  G
Sbjct: 183 PEFIQPDARRNEIVSFVSGGLRDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D       ++WPADLH+IGKDI+RFH +YWPAFL+SA L LP+KVF+HG++L++GEK+
Sbjct: 243 YPDTSSEEFQRYWPADLHMIGKDIIRFHTVYWPAFLMSAGLELPRKVFAHGWLLNRGEKM 302

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+ +++  G+D +RYF +RE+  G+DG Y +D +  R+NADLAN +GNL  
Sbjct: 303 SKSIGNVVDPVNLVDTFGLDQVRYFFLREVPFGQDGSYSEDAIIGRINADLANELGNLAQ 362

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+    +P PG FT  D ++L     ++  +R +   Q +H AL  + S++  
Sbjct: 363 RSLSMVAKNLGSAVPEPGEFTAEDLALLDAADALMDRVRRHFDEQAMHLALEAIWSVLGA 422

Query: 424 VDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +RYF AQ+PW L+K+    +  R  TVLY T+E +R  A+L Q  +P     + D++  
Sbjct: 423 ANRYFSAQEPWVLRKSEAVHDQVRFRTVLYTTLETVRIAALLSQPVMPDSTATLLDLVGQ 482

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + R F ++  RL PG  L K    +FPR+
Sbjct: 483 PADQRTFAAVSTRLTPGTALPKPVG-VFPRY 512


>gi|315651952|ref|ZP_07904954.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485781|gb|EFU76161.1| methionine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 652

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 208/518 (40%), Positives = 312/518 (60%), Gaps = 14/518 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +GL+V F TGTDEHGQKI   A
Sbjct: 2   SKKPYYITTAIAYASGKPHIGNTYEIVLADAIARFRREEGLEVFFQTGTDEHGQKIENKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++AG+T K +VD  +   R + D+++ SYD FIRTT++ H    + ++KK  D+GDIYKG
Sbjct: 62  KDAGITPKEYVDNAAGQIRKIWDLMNTSYDKFIRTTDEDHKKQVQKIFKKFYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           CY G Y    E+++ D ++  G            V   +EE YFF++S Y D+L+ Y   
Sbjct: 122 CYEGMYCTACESFFTDSQLVDGK----CPDCGGDVYPAKEEAYFFKMSKYADRLIKYINE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DAL+NY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVEFDPKHVTYVWLDALSNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S    +FWPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDVDGNSSERFKRFWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI    +++  GVDA+RYF++ E+    DG    + + +R N+DLAN +G
Sbjct: 298 DGKMSKSKGNVIYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWELMVERFNSDLANVLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           NLVSR++SM  K +DG++      +     E D  +  V    ++++   M    +  A+
Sbjct: 358 NLVSRTISMTNKYFDGVLTDTKDESVAGAMEVDTDLKDVALMTVEKVVRKMSELRVADAI 417

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +++ +L    ++Y D   PW L K      R  TVLY   E I   A LL +F+P+ + K
Sbjct: 418 SEIWTLFKRCNKYIDETTPWILAKEEDKKSRLQTVLYNLAESISIGATLLYSFMPETSEK 477

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I +       +    +    L  G  L K  + +F R 
Sbjct: 478 ILEYFGTNKRSLEDMNKFGLLMSGTTLAKDPEILFKRL 515


>gi|327470507|gb|EGF15963.1| methionine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 665

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 313/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSM+ K +DG IP      T+ D ++  V +  + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMVNKYFDGQIPAYEENVTDFDGALAQVAAESIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|237737868|ref|ZP_04568349.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419748|gb|EEO34795.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 641

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 213/513 (41%), Positives = 313/513 (61%), Gaps = 11/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+G AY  I ADV+AR+ R  G D  F TGTDEHGQK+ + A+ 
Sbjct: 3   KNFYVTTPIYYVNGDPHVGSAYTTIAADVMARYKRTMGYDAYFLTGTDEHGQKVEETAKQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D  +  F++M   L I Y DFIRTTE RH +  + + KK+ + GDIYKG Y
Sbjct: 63  KGYTPQQWTDIMAPRFKEMWAKLGIEYSDFIRTTESRHKEAVKKILKKVYENGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E +  ++++    +G +       ++ ++EE YFF++S YQD LL + + HP
Sbjct: 123 SGKYCVSCETFVPENQIV---NGNHCPDCGKELRVVKEESYFFKMSKYQDALLEHIDKHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  RRNEV+SF+K GL+DLS+SR TF+WGI I   P +I YVW DALTNYLT  GY
Sbjct: 180 DFILPRSRRNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGY 239

Query: 245 LDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            +NP+     +  A++ H++GKDI+RFHAI WP  LLSA   LP KV +HG+   +GEK+
Sbjct: 240 ENNPEMFDKYWNNAEVMHLLGKDIVRFHAIIWPCMLLSAGEKLPDKVVAHGWWTSEGEKM 299

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DPI  IE+ GVDA RY L+RE+  G DG Y    +  R+N+DLAN +GNL++
Sbjct: 300 SKSKGNVVDPISEIEKYGVDAFRYCLMREVQFGNDGDYSTKSVVTRINSDLANDLGNLLN 359

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M  K + G++       + D+ I ++ + V++E+ E M      +AL  +   +S 
Sbjct: 360 RTLGMYKKYFGGVVVNGATRDKYDDEIETLWTEVVKEVEEQMNIVQYSKALEAIWKFISR 419

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++Y D   PW L K   N DR + V+   V+ + + A+++  ++P  A KI++ L    
Sbjct: 420 LNKYIDETAPWTLAKDEANRDRLAVVMNHLVDGLYKAAVMVYPYMPTSAQKIWNQLGETR 479

Query: 482 ENRCFQ----SLDQRLKPGFMLHKTFDPIFPRF 510
           +    +         L+ G +L    +PIFPR 
Sbjct: 480 DIHTAKVEEVMGWNLLREGHVLGNA-EPIFPRL 511


>gi|188583889|ref|YP_001927334.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347387|gb|ACB82799.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 522

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 275/512 (53%), Positives = 362/512 (70%), Gaps = 5/512 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG +VLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGREVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD +YD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  AAKAGVTPRAFVDDMAGRFKAVADRLDCAYDRFIRTTEPDHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E     DG +       PV+WMEEE Y FRLS YQ+ LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETVLAPDGSRRSAKTDTPVEWMEEENYLFRLSKYQEPLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              P+F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 AEQPDFLAPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D    + A+FWPA LH+IGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAGAPN-ARFWPASLHIIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP++++   GVD +RYFL+RE   G DG YD + +  R+NADLAN +GN
Sbjct: 305 EKMSKSLGNVVDPLDLVGTYGVDPVRYFLLREAPFGGDGNYDHEAIINRINADLANDLGN 364

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L  RS+SMI K+ DG +P PG FTE+D  +L+  + + ++ R  MQN  +H  LA++ ++
Sbjct: 365 LAQRSLSMIAKNCDGAVPEPGDFTEADARLLAAAAALPEKARGLMQNLALHAILAEIWAV 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E +RYF +++PW+L+K++P R +TVLYVTVE +R++ +++Q FVP     + D+L V 
Sbjct: 425 VGEANRYFASEEPWKLRKSDPARMNTVLYVTVETLRRVGLMVQPFVPTAGAALLDLLAVP 484

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            + R F     D RL+ G  L     PIFPRF
Sbjct: 485 VDRRSFAFAGEDHRLQGGTALPAPA-PIFPRF 515


>gi|294011648|ref|YP_003545108.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674978|dbj|BAI96496.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 520

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 234/513 (45%), Positives = 327/513 (63%), Gaps = 9/513 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I+TAI+YPN +PHIGHAYE+I  D +ARF R+ G DV F TGTDEHG K+A+ A++
Sbjct: 3   KPYTITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARS 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  +   D+ S  FR M D L+ISYD FIRT+E  HH   + +W+ +   GD+Y G Y
Sbjct: 63  RDMEPRALADEMSGYFRAMNDGLNISYDRFIRTSEPDHHRASQAIWQAMEANGDLYLGRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+ +G  GQ  + Q  PV+W  EE +FFRLSAYQ KLL  Y + P
Sbjct: 123 EGWYSVRDEAFYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYANQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE++ FV+ GL DLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  GY
Sbjct: 183 DFIQPDSRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYITGCGY 242

Query: 245 LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            D+ +   A++W       H+IGKDI+RFH +YWPAFL+SA LPLPK+VF HGF+L++GE
Sbjct: 243 PDDTER-MARYWSEGGDITHIIGKDIVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRGE 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV DP+E+ E  GVD LRYFL+ E+  G DG Y  + +  R N+DLAN  GNL
Sbjct: 302 KMSKSLGNVADPMELAERFGVDQLRYFLLSEVTFGNDGSYSAEAIVARSNSDLANSFGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R++S I K+ +G +P   A  + D  +L+      +  +  M +     A+   +  V
Sbjct: 362 AQRTLSFIAKNLEGRLP-ETAAQDVDRDLLATVGEAARTFQAAMADLAPSTAIEAWMRAV 420

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              + Y DAQ PW L+KT+P R   VL    E I  LAI++Q  +P  A  + + + +A+
Sbjct: 421 FACNAYIDAQAPWTLRKTDPARMEAVLATLYEAIADLAIVIQPIIPASAAALLEQMGIAE 480

Query: 482 ENRCFQSLDQ----RLKPGFMLHKTFDPIFPRF 510
           + R + ++      RL+          P+FPR 
Sbjct: 481 DGRSYAAIGSDWYARLRASGFTLSAPKPLFPRL 513


>gi|166031337|ref|ZP_02234166.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC
           27755]
 gi|166028742|gb|EDR47499.1| hypothetical protein DORFOR_01024 [Dorea formicigenerans ATCC
           27755]
          Length = 648

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 203/518 (39%), Positives = 310/518 (59%), Gaps = 31/518 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 6   NKGKYYITTAIAYASGKPHIGNTYEVVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 65

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+T K FVD  +R  + + D+++ SYD FIRTT++ H    + ++K++ D+GDIYK 
Sbjct: 66  DEAGITPKQFVDNAAREIKKIWDLMNTSYDKFIRTTDEDHEAQVKKIFKRLYDQGDIYKS 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G             +  +EE YFFR+S Y D+L+ Y  +
Sbjct: 126 SYEGMYCTPCESFWTESQLVDGK----CPDCGRECKPAKEEAYFFRMSKYADRLIDYINT 181

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T 
Sbjct: 182 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVVYVWLDALTNYITG 241

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + +    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 242 IGYDCDGNSTEQFKKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 302 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLG 361

Query: 360 NLVSRSVSMILKDYDGMIPTPG-AFTESDES----ILSVCSRVLQEIRENMQNQLIHRAL 414
           NLV+R++SM  K + G +   G A TE D++    + ++     + +   M    +  A+
Sbjct: 362 NLVNRTISMTNKYFGGTVTNKGVAETEEDKAVDADLKAITEDTPKRVEAKMDELRVADAI 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++  L    ++Y D   PW L K     DR  TVLY  +E I+  A LL++F+P+ + K
Sbjct: 422 TEIFVLFKRCNKYIDETMPWALAKEEAKKDRLETVLYNLIESIKTGARLLESFMPETSEK 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L                     + +  + +F R 
Sbjct: 482 ILAQLG-----------------DGKVTEKPEILFARL 502


>gi|300812080|ref|ZP_07092528.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496919|gb|EFK31993.1| methionine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 660

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 302/518 (58%), Gaps = 10/518 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+ +  IG+AY  + AD + R+ +  G D  F TGTDEHG KI + A
Sbjct: 4   NKKTFYITTPIYYPSGRLTIGNAYTTVAADTMTRYKKARGYDTFFLTGTDEHGLKIEQKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  K ++D   ++ +++   LDI+YD FIRTT++ H    + +++K+   GDIY G
Sbjct: 64  EKLGMKPKAYLDGMVKDIKELWKKLDINYDKFIRTTDEEHVKAVQKIFEKLKASGDIYLG 123

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+GWYS+ DE Y+ +    EV+K   G          + VQ ++E  YFF++S Y D+L
Sbjct: 124 EYTGWYSVEDEEYFTESQLKEVFKDDQGNVVGGIAPSGHEVQLVKEPSYFFKMSKYADRL 183

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ HPEFI P  R  E+++   K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 184 LQYYKDHPEFIQPNSREKEMVNNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK+VF HG+
Sbjct: 244 ANYITALGYGSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQVFGHGW 303

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L   +K+SKS GN + P  +I   G+D +RY+L+R I  G DG +  +   +R N DLA
Sbjct: 304 VLIYKDKMSKSKGNAVYPESLISRYGLDPVRYYLMRAIPFGADGSFTPEDFVERTNFDLA 363

Query: 356 NGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+VSMI +     + P      +  + + +V ++ + +   NM       AL
Sbjct: 364 NDLGNLLNRTVSMINQYQKGLVAPVDQDQDKYGQDLAAVAAKAISDYYGNMDKMHFSNAL 423

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             V  L+S  ++Y D   PW L K    +  S V+    E +R +AI++   + +   K+
Sbjct: 424 ENVWQLISRANKYIDETTPWVLNKEGMTEELSRVMSNLAESLRLVAIMIAPVMTETPGKM 483

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           F  L +  E+   + L          +     PIFPR 
Sbjct: 484 FAQLGLDWEDESQKDLQFGGFAWDVNVVAKPTPIFPRL 521


>gi|241888882|ref|ZP_04776188.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864558|gb|EER68934.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 666

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 208/521 (39%), Positives = 318/521 (61%), Gaps = 13/521 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YP+   HIGHAY  +  D L R+ +L G D  F TGTDEHGQKI + A
Sbjct: 2   TKKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYDTYFLTGTDEHGQKIQQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G++ + +VD+  ++ + + + +DI+Y  FIRTT+  H      ++ K+ +KGDIY G
Sbjct: 62  QEKGISEQAYVDEMIKDIKKLWEAMDINYSKFIRTTDDYHETAVAEIFDKLVEKGDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EV++  +G          N V+ + EE YFF++S Y D+L
Sbjct: 122 EYKGWYSISDEEYFTETQLQEVFRDEEGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRL 181

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YY+ HPEFILP  R+NE+++   K GL+DL+++R TFDWG+K+  +P++++YVWIDAL
Sbjct: 182 VKYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY+T  GY          K+WPAD+ V+GK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 242 VNYITALGYATGGSEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKIFAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+D+ RY+L+RE+  G+DG +  +    R+N+DL
Sbjct: 302 WLLMKDGKMSKSKGNVVDPYMLIERYGLDSARYYLLREVPFGQDGIFTPESFIDRINSDL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +N +GNL++R++SMI K   G+IP      TE D  ++++   V+ E  E M+N    +A
Sbjct: 362 SNDLGNLLNRTISMINKYCGGVIPKFVEPTTEFDRELIALSKEVIAEYEEYMENMQFSKA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V   +S  ++Y D   PW L K   +      V+    E +R   IL+   + K   
Sbjct: 422 LESVWKFISRTNKYIDQTTPWILAKDEENQPELDKVMNYLAESLRIATILIAPALTKAPT 481

Query: 472 KIFDILFVADENRCFQSLDQ-RLKPGF-MLHKTFDPIFPRF 510
           +I   L + ++   F+S     +  G   + +   PIFPRF
Sbjct: 482 EIAKQLGIREDLLVFESAKTFGVFDGTVKVVEKPTPIFPRF 522


>gi|289422845|ref|ZP_06424678.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156755|gb|EFD05387.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 647

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 210/518 (40%), Positives = 324/518 (62%), Gaps = 13/518 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   Y++T I YP+ + HIGHAY  I AD +ARF R  G DV F TGTDEHG+KI K
Sbjct: 1   MTKKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYDVRFLTGTDEHGEKIQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD-TCRILWKKISDKGDI 119
            AQ AG++   F+D    + + + + L+IS DDFIRTT+K  H+   + ++ K+ ++GDI
Sbjct: 61  KAQEAGMSEIEFLDAQIADIKKLWEKLEISNDDFIRTTDKERHEVIIQKIFTKLYEQGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y +  E+++ + ++    DG          + ++EE YFFRLS YQD  +  
Sbjct: 121 YKGSYEGNYCVPCESFWTESQMI---DGHKCPDCGRETKIVKEESYFFRLSKYQD-RIRD 176

Query: 180 YESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
              + +F+LP  R+NE+I +F+  GL+DLS++R +FDWGIK+P D  +++YVWIDAL NY
Sbjct: 177 LFENTDFVLPESRKNEMIKNFIDPGLEDLSVTRTSFDWGIKVPFDEDHVIYVWIDALCNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +T+ GY+   D     +WPA++ ++ K+I+RFH I WPA L++ +LPLP++VF HG+IL 
Sbjct: 237 ITSLGYMSEDDSKFKNYWPANVQLVAKEIVRFHTIIWPALLMALDLPLPQRVFGHGWILF 296

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GN++ P +++++ GVDAL+YFL+RE + G+DG Y       R+N+DLAN +
Sbjct: 297 ADDKMSKSKGNIVYPGQMVDKYGVDALKYFLLREFSFGQDGSYTHRNFITRINSDLANDL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSR+VSM+ K  DG++    A TE D+ ++++   +  +  + M + + H AL  V 
Sbjct: 357 GNLVSRTVSMVEKYNDGILVVNDAKTEFDDELINLYKEIRVDFEKQMNDLMFHEALESVW 416

Query: 419 SLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V   ++Y D   PW L K +   D+ + VLY   E IR ++ L+ + +P  A KIF  
Sbjct: 417 RFVRRTNKYIDETMPWALAKDDSKKDQLNHVLYNLCESIRLISTLISSLLPDTARKIFYQ 476

Query: 477 LFVA--DENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           L +   +E   ++S D    +  G  +H   + +FPR 
Sbjct: 477 LGIEGFEELTNWESTDTFGLIADGTKVH-RGEVLFPRL 513


>gi|300814290|ref|ZP_07094562.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511557|gb|EFK38785.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 653

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 211/512 (41%), Positives = 310/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGH Y  + AD + RF  L G +V FTTGTDEHGQKIA  AQ
Sbjct: 2   KKNFYLTTPIYYPSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K +VD+   N + + + LDI YD FIR+T+ +H    + L+KK+ DKGDIYKG 
Sbjct: 62  EAGMEPKAYVDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y    E+++   +V    D           Q  +EE YFFRLS Y+DKLL    ++
Sbjct: 122 YEGYYCTPCESFWTQAQVG---DDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNN 178

Query: 184 PEFILPIERRNEVISFV---KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            EF  P  R+NE+I        GL+DLS+SR +  WG+++P D ++++YVWIDAL  YL+
Sbjct: 179 EEFTEPAFRKNELIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLS 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              +  + +    +FWPAD+H++GK+I RFHA+ WPA L++ +LPLPKK+F HG+IL   
Sbjct: 239 AIEFGTDKE-KFNEFWPADVHLVGKEIFRFHALIWPALLMALDLPLPKKIFGHGWILFDN 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+ P  +I+  GVDAL+YFL+RE + G DG + K+   +R+N+DLAN +GN
Sbjct: 298 DKMSKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  DG+I  P    E D+ + ++   V  ++ E M++   + AL ++  L
Sbjct: 358 LLSRTVSMITKYNDGIIEKPNREEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWKL 417

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   N DR +TVLY   E +R +++L+  F+   + +I   L 
Sbjct: 418 IRRSNKYVDETTPWILAKDEKNKDRLNTVLYNLAESLRIISVLINPFITNTSKEIIRQLG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + ++     S    L P          IFPR 
Sbjct: 478 LEEKVDWESSQKWGLIPNATKVNKGQIIFPRL 509


>gi|309803659|ref|ZP_07697749.1| methionine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164257|gb|EFO66514.1| methionine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 675

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 205/519 (39%), Positives = 316/519 (60%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI + A
Sbjct: 19  EKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQKA 78

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++  +GDIY G
Sbjct: 79  EAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERLLKQGDIYLG 138

Query: 123 CYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFFR+S Y D+L
Sbjct: 139 EYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFFRMSKYADRL 198

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++++YVWIDAL
Sbjct: 199 LEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKHVVYVWIDAL 258

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPLPK++F HG+
Sbjct: 259 SNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKQIFGHGW 318

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +   +RVN DLA
Sbjct: 319 VLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDFVERVNFDLA 378

Query: 356 NGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R++SMI +  DG + P      E  + +  + +  +    E M      +AL
Sbjct: 379 NDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQMDALHFSKAL 438

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++  + +    I
Sbjct: 439 DTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRPIMTQSPVHI 498

Query: 474 FDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
           F+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 499 FEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 536


>gi|148265184|ref|YP_001231890.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398684|gb|ABQ27317.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 509

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 220/506 (43%), Positives = 319/506 (63%), Gaps = 8/506 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  + ADVLAR+ RL G +V F TGTDEHGQK+ KAA  AG
Sbjct: 5   FYVTTPIYYVNDVPHIGHAYTTLAADVLARYKRLKGFEVFFLTGTDEHGQKVEKAANAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T +   D+  + F+ + + LDISY DFIRTT++RH      L+ K+  KGDIY G Y  
Sbjct: 65  ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVADLFTKVMGKGDIYLGEYED 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY    E ++ + ++            + P + ++EE YFFR+S YQ++LL++ E++P+F
Sbjct: 125 WYCTPCETFWTETQLID----YKCPDCNRPTEKLKEESYFFRMSKYQEQLLAHIEANPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ISFV+ GL+DLS+SR TF WGI +P + ++++YVW DALTNY+T  GY D
Sbjct: 181 IQPKSRRNEIISFVREGLRDLSVSRTTFTWGIPVPGNDKHVIYVWFDALTNYITALGYPD 240

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
               + +KFWP D H+IGKDILRFHA+YWP FL++A LP+PKKVF+HG+   +G+K+SKS
Sbjct: 241 ESG-NFSKFWPVDAHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKS 299

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           L NV++P  +I++ GVDA+RYFL+RE+  G DG +    L  R+N+DLAN +GNL++RS 
Sbjct: 300 LQNVVEPNMLIDKYGVDAIRYFLLREVPFGLDGDFSHTALVHRINSDLANDLGNLLNRST 359

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +M+ K + G++  PG F E D         +++++  ++      +AL  +  +VS  ++
Sbjct: 360 AMVNKYFGGVVQAPGVFNEIDSIYREKTEEMVRQVDAHLDELAFSKALQSIWEVVSAGNK 419

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D   PW L K     DR +TV+Y  +E  R +  ++ AF+P+   K    L   +   
Sbjct: 420 YIDETAPWTLAKDEAQKDRLATVMYCLLESQRIVYFIISAFMPQTTVKGLGYLGWNEAPD 479

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   LKPG  + K  + +FPR 
Sbjct: 480 ENGLRWGGLKPGTQVIKA-EALFPRI 504


>gi|169335812|ref|ZP_02863005.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258550|gb|EDS72516.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
           17244]
          Length = 651

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 205/515 (39%), Positives = 314/515 (60%), Gaps = 14/515 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YISTAIAY + +PHIG+ YE+++AD +AR+ RL G DV F TGTDEHGQKI   A
Sbjct: 2   SKKPYYISTAIAYTSGKPHIGNTYEIVLADSIARYKRLTGYDVYFQTGTDEHGQKIETKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+T + FVD  S     + D+++ SYD F+RTT+  H    + ++KK+ ++GDIYK 
Sbjct: 62  NEAGITPQKFVDNVSEEIHRIWDIMNTSYDKFVRTTDPYHEKKVQQIFKKLYEQGDIYKD 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G            V + +EE YFF+LS Y D+L+ Y E+
Sbjct: 122 EYEGMYCEPCESFFTESQLIDGK----CPDCGREVSYEKEEAYFFKLSKYADRLMEYIET 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++   K GLKDL +SR +F WGI +  DP +++YVWIDAL+NY+T 
Sbjct: 178 HPEFIQPESRKNEMVNNFLKPGLKDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITF 237

Query: 242 TGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + +  +   K+WPAD+H+IGKDILRFH +YWP  L++ +LPLPK++F H ++L  
Sbjct: 238 LGYDPDGNHEENYNKYWPADVHLIGKDILRFHTLYWPIMLMALDLPLPKQIFGHPWLLLG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   ++++  GVD++RY+L+RE+   +DG    + L  R+N +L N +G
Sbjct: 298 EGKMSKSKGNVIYADDLVDLFGVDSVRYYLLREMPFAQDGTLTYEQLIDRINGELVNILG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R+++M  K +D ++  P    + D  ++ +  +    + E M    +  A+  +I+
Sbjct: 358 NLVNRTIAMSKKYFDSIVSNPKDIEDIDNELIELTEKTPLLVEEKMNELKVADAINLIIA 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K     DR  TVLY  +E IR + +L+  F+P+    I  +L
Sbjct: 418 LARRSNKYIDETMPWVLAKEEDKQDRLRTVLYNLLESIRVIGVLITPFLPETGENIIKML 477

Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
                N  ++S+     L+ G  L+K F  +F R 
Sbjct: 478 NTK--NSSYESILKFGGLEEGITLNKAF-VLFNRL 509


>gi|85708668|ref|ZP_01039734.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
 gi|85690202|gb|EAQ30205.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
          Length = 525

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 248/516 (48%), Positives = 333/516 (64%), Gaps = 11/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E    YI+TAI YPN +PHIGHAYE I ADV+ARF RL G +V F TGTDEHG K+A+ 
Sbjct: 4   TENAPYYITTAINYPNGRPHIGHAYEGIAADVIARFQRLKGREVRFQTGTDEHGLKMARK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D+ S  FR+M + L+I +D FIRT E  HH   + +W+++   GD+Y 
Sbjct: 64  AEEQGRTPRDLADEMSGYFREMDEALNIDFDRFIRTVEPEHHRASQAIWERMEAAGDLYL 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWYS+RDEAYY++ E+ +G   Q  + Q  PV+W  EE +FFRLS Y+  LL   +
Sbjct: 124 DRYEGWYSVRDEAYYDESELVEGEGEQKLSPQGTPVEWTVEESWFFRLSKYEKPLLDLLK 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           + P F+ P  RRNE+I+FV+ GL+DLS+SR +FDWG+K+P    ++MYVW+DALTNYLT 
Sbjct: 184 T-PGFLEPASRRNEMIAFVEQGLRDLSVSRTSFDWGVKVPGSDNHVMYVWVDALTNYLTG 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D       KFWPA LH+IGKDI+RFH IYWPAFL+SANLP+PKKVF HGF+L++G+
Sbjct: 243 LGFPDETP-EMEKFWPASLHLIGKDIVRFHTIYWPAFLMSANLPVPKKVFGHGFLLNRGQ 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K SKSLGNV DP+E+ E+ GVD LRYFL+RE+A G+DG Y  + +  R NA+LAN  GNL
Sbjct: 302 KESKSLGNVTDPLELAEQFGVDNLRYFLMREVAFGQDGSYSSEAIVTRTNAELANSFGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRALAQVISL 420
             R++SMI K+ DG++  P    E D ++L+   +    ++    +       +   I  
Sbjct: 362 AQRTLSMIAKNMDGVL-EPFELAEVDTALLAAVKNACATDLPREFEQLAFSVGIEVWIKA 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V   ++Y D Q PW LKKT+P+R   VL      IR LAI +Q  VP+ A+ + D L V 
Sbjct: 421 VYACNQYVDEQAPWTLKKTDPERMKAVLQTLFCAIRDLAIAIQPIVPEKASAVLDQLGVP 480

Query: 481 DENRCFQSLDQR------LKPGFMLHKTFDPIFPRF 510
           +  R F+ L  R       K G ++ K   PIFPR 
Sbjct: 481 ENERQFEQLHDRSWFDRLAKSGHVVGKP-TPIFPRL 515


>gi|327490158|gb|EGF21946.1| methionine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 665

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 313/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   + +  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDSMAVGVKKLWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K ++G +P      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFNGQVPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A ++  F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 521


>gi|324994961|gb|EGC26874.1| methionine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327462997|gb|EGF09318.1| methionine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 665

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDNHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K ++G +P      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFNGQVPAYEENVTDFDGALAQVAAQSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A ++  F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 521


>gi|325696277|gb|EGD38168.1| methionine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 679

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 312/521 (59%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 15  MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++ ++L+ISYD FIRTT+  H      +++++  + DIY
Sbjct: 75  KAEEAGISPQAYVDGMAVGVKELWNLLNISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 135 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 194

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 195 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 255 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 314

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 315 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 374

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D  +  V S  + +  ++M      
Sbjct: 375 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGPLAQVASESIADYYKHMDAVDYP 434

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A ++  F+ + 
Sbjct: 435 RALEAVWTLISRTNKYIDETAPWVLAKDETKVKELAAVMSHLASSLRVVAHMIDPFMMET 494

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 495 SKAVLSQLGLPQATSLENLAIDQLPSGLTVVEKGTPIFPRL 535


>gi|325294665|ref|YP_004281179.1| methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065113|gb|ADY73120.1| Methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 525

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 230/511 (45%), Positives = 322/511 (63%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++T I Y N  PH+GHAY    AD++ARF+R  G DV F TGTDEHGQKI +AA+ 
Sbjct: 2   EKFYVTTPIYYVNDIPHLGHAYTTTAADIVARFNRFLGRDVFFLTGTDEHGQKIQQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FVD     F+++ + L+ISYD FIRTT+  H    + ++KK  + GDIY G Y
Sbjct: 62  RGMTPKEFVDTLVPKFKELWEKLNISYDHFIRTTDPEHIKAVQYIFKKCYENGDIYLGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E Y+ + E+    +G+Y       V  ++EE YFFRLS YQD+LL +YE +P
Sbjct: 122 EGWYCIPCETYHTEKEL---LEGKYCPMCKREVVRVKEESYFFRLSKYQDRLLEFYEENP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVI+FVK GLKDLS+SR +F WGI +P + ++++YVW DALTNYLT  GY
Sbjct: 179 DFIAPEFRRNEVINFVKQGLKDLSISRTSFTWGIPVPINEKHVIYVWFDALTNYLTAVGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            DN D     +WPADLH++GKDILRFH +YWPAFL+SA L +PK+VF+HG+    GEK+S
Sbjct: 239 PDNMDKVN-HYWPADLHLVGKDILRFHTVYWPAFLMSAGLEIPKRVFAHGWWTVNGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV +P E+IE+ GVD +R+FL RE++ G DG +  + L  R+N +LAN +GNL +R
Sbjct: 298 KSKGNVANPFEIIEKFGVDQVRFFLFREVSFGLDGDFTYEKLVGRINGELANDLGNLFNR 357

Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           ++SM+ K    ++P P GA  E D  + +        ++E +    + RAL ++   VS 
Sbjct: 358 TLSMLKKYRKSIVPEPKGAEDELDVELKNKAIATAARLKELIPKAELTRALEEIWQFVSF 417

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+ Y D + PW L K   +    VLY  VE +R +   +  ++P  A K+ ++L +  + 
Sbjct: 418 VNFYIDRRAPWSLNKEGKEELDRVLYNMVEALRFITAFVYPYMPSSAEKMAEMLKLGKKA 477

Query: 484 RCFQ----SLDQRLKPGFMLHKTFDPIFPRF 510
              +         +KPG  L K    +FPR 
Sbjct: 478 ESLRISEFEDWGGIKPGTELEKGG-ILFPRI 507


>gi|157149888|ref|YP_001450809.1| methionyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074682|gb|ABV09365.1| methionine-tRNA ligase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 666

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 197/521 (37%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW      ++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFQMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +PT     T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVAAKSIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     ++ ++V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQAASLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|160878187|ref|YP_001557155.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160426853|gb|ABX40416.1| methionyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 664

 Score =  441 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 204/521 (39%), Positives = 308/521 (59%), Gaps = 17/521 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAIAY + +PHIG+ YE+++AD +ARF RL+G +V F TGTDEHGQKI + A
Sbjct: 2   SKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARFKRLEGYEVFFQTGTDEHGQKIEEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV+ K FVD+ +   +D+ D+++ SYD FIRTT+  H    + ++KK+ D+GDIYKG
Sbjct: 62  AEVGVSPKEFVDKVAGGIKDIWDLMNSSYDKFIRTTDVDHEKQVQKIFKKLYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++   ++  G             Q  +EE YF +LS Y  +L+ +  +
Sbjct: 122 NYEGMYCTPCESFFTASQLVNGK----CPDCGRECQPAKEEAYFLKLSNYTGRLIDHINT 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++     GL+DL +SR +F WGI +  DP++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVIYVWIDALSNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH- 298
            GY  + + +    KFWPADLH+IGKDILRFH IYWP  L++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDCDGNSTEQFNKFWPADLHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLQT 297

Query: 299 -------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G K+SKS GNV+   +++E  GVDA+RYF++ E+    DG  + + +  R+N
Sbjct: 298 DPNAKDGSGVKMSKSRGNVLYADDLVEFFGVDAVRYFVLHEMPFDNDGVINWELMVDRMN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +DLAN +GNLV+R++SM  K ++G++         D  ++ V ++   ++   M N  + 
Sbjct: 358 SDLANTLGNLVNRTISMSNKYFEGVVNKTDVTEPVDADLIEVVTKTRDKVVAKMANLRVA 417

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A++++ +L    ++Y D   PW L K      R   VLY  VE I   A LL+ F+P+ 
Sbjct: 418 DAISEIFTLFKRCNKYIDETMPWALAKEEEKKARLENVLYNLVESICIGANLLEPFLPES 477

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A KI   L     N    +       G  +      +F R 
Sbjct: 478 AEKILAQLNAKKRNIEELATFGLYDNGTKVTDQPQILFARL 518


>gi|319936629|ref|ZP_08011042.1| methionine-tRNA ligase [Coprobacillus sp. 29_1]
 gi|319808186|gb|EFW04751.1| methionine-tRNA ligase [Coprobacillus sp. 29_1]
          Length = 640

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 210/517 (40%), Positives = 322/517 (62%), Gaps = 13/517 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAI Y + +PHIG+ YE+I+AD +AR  R +G +V F TGTDEHGQKI  
Sbjct: 1   MKNPKDYYLTTAITYTSGKPHIGNTYEIILADAIARSKRQEGYNVYFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG+  K FVD+ +   +++ D++D SYD F+RTT++ H    + ++KK+ D+GDIY
Sbjct: 61  KAQEAGIPPKQFVDEKAAVVKNIWDLMDSSYDKFMRTTDEYHIKQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y    E+++ + ++  G           PV   +EE YFF+LS Y D+L+ + 
Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGK----CPDCGGPVHDAKEEAYFFKLSKYADRLIQHI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E+HPEFI P+ R+NE+++   K GL+DL +SR TF W I +  DP++++YVWIDALTNY+
Sbjct: 177 ENHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTTFTWSIPVDFDPKHVVYVWIDALTNYI 236

Query: 240 TTTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      ++WPADLH+IGKDI+RFH IYWP  L++ ++PLPK+VF H ++L
Sbjct: 237 TGLGYDVDGNHGELYKRYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+RY+++ EI    DG    D L +R+N+DLAN 
Sbjct: 297 QGESKMSKSKGNVIYADDLVQIFGVDAVRYYVLHEIPYDNDGSITWDLLVERINSDLANI 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+++M  K +DG++  P  + E D+ +  +   + +++++ M      +AL ++
Sbjct: 357 LGNLVNRTIAMTNKYFDGVVTNPEVYEEVDDELKQIALAMPKKVQDLMDEFKASKALDEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+   ++Y D   PW L K     +R +TVLY  +E IR  AI L+ F+P  + KI D
Sbjct: 417 FVLLRRTNKYIDDTMPWALAKETDKQERLATVLYNLIEAIRFAAIALEPFMPSTSTKILD 476

Query: 476 ILFVADENRCFQSLDQ-RLKP-GFMLHKTFDPIFPRF 510
              +  + R F+ L    L P G  +      +F R 
Sbjct: 477 Q--IHTDLRDFKDLSTFGLYPVGNKVTDKPQQLFARL 511


>gi|227431221|ref|ZP_03913275.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352983|gb|EEJ43155.1| methionyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 702

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 213/522 (40%), Positives = 317/522 (60%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+ +  YI+T I YP+ +  +G+ Y  ++AD  AR+HRL G DV F TGTDEHG KI +
Sbjct: 33  VKKDKTFYITTPIYYPSGKLQLGNTYTTVLADAAARYHRLLGEDVYFLTGTDEHGLKIQQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++   F+D  ++  +D+  ++DISYDDFIRTTE RH      ++ ++ + GDIY
Sbjct: 93  KAEAAGISEIDFLDGMAKQIKDLWKLMDISYDDFIRTTEDRHEKAVAKIFTQLLENGDIY 152

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
           KG Y GWYS+ DE Y+ +    EVY+   G+    +    + V+ ++EE YFF++S Y D
Sbjct: 153 KGEYEGWYSVSDEEYFTESQLAEVYRDDAGKVIGGKAPSGHEVELVKEEAYFFKMSKYAD 212

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY++HPEFI P  R NE+I+     GL+DL+++R +FDWGI +P D ++++YVWID
Sbjct: 213 WLLDYYKTHPEFIQPEARMNEMINNFIAPGLEDLAVTRTSFDWGISVPGDEKHVIYVWID 272

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY  +      KFWPA++ ++GK+I+RFH IYWP  L +  L LPK V  H
Sbjct: 273 ALANYITALGYNSDDTTLFDKFWPANVQLVGKEIVRFHTIYWPIMLHALGLELPKSVVGH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+++ K  K+SKS GNVI P  + E  G+DA+RY+L+R +  G DG +  +    RVN D
Sbjct: 333 GWLVMKDGKMSKSKGNVIYPEVLEERYGLDAVRYYLLRSMPFGNDGVFTPEDFVARVNYD 392

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K  DG+IP      T  DE ++      + E  +N +      
Sbjct: 393 LANDLGNLLNRTVAMINKYVDGVIPELLTGKTSFDEDLVRTVEDAIVEYNKNFKELCTAD 452

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V  ++   ++Y D  +PW L K   ++   S+V+      +R  A+LLQ  + +  
Sbjct: 453 ALESVWKIIRRANKYIDETQPWVLAKDENEKEVLSSVMAHLAGALRVTAVLLQPVLTQAP 512

Query: 471 NKIFDILFV--ADENRCFQSL-DQRLKPGFMLHKTFDPIFPR 509
            KIFD L +  +D+      L   +L  G  + K  +PIFPR
Sbjct: 513 KKIFDQLGLDYSDKGVAIAGLTFSKLPTGGHVVKKGEPIFPR 554


>gi|256027687|ref|ZP_05441521.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765647|ref|ZP_06525025.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717202|gb|EFD81214.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 639

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 213/517 (41%), Positives = 315/517 (60%), Gaps = 12/517 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK+ EK  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ 
Sbjct: 1   MKKNEKEFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTYFMTGLDEHGQKVE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA+  G T + + D+ + NF++M   LDI YDDFIRTTE RH    R +   ++ KGDI
Sbjct: 61  QAAEQNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y +  E ++ ++++               ++ ++EE YFF++S Y D LL +
Sbjct: 121 YKGEYEGKYCISCETFFPENQLNGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKH 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E HP+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+
Sbjct: 178 IEEHPDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYI 237

Query: 240 TTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T+ G+ ++       +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   
Sbjct: 238 TSAGFENDEKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTS 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +GEK+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +
Sbjct: 298 EGEKMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R++ M  K ++G++         D+ I S+ + V++++ + M      RAL  + 
Sbjct: 358 GNLLNRTLGMYKKYFNGVVVASSTAEPIDDEIKSMFNDVIKDVEKYMYLFEFSRALETIW 417

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +S +++Y D   PW L K  T   R +TV+ +  E + ++A L+  ++P+ A KI + 
Sbjct: 418 KFISRLNKYIDETMPWSLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQ 477

Query: 477 LFVADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
           L +  +  N  F  +      K G  L +   PIFPR
Sbjct: 478 LGINKDITNVKFDDIKGWDIFKAGHKLGEA-SPIFPR 513


>gi|282883266|ref|ZP_06291864.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281296896|gb|EFA89394.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 653

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 210/512 (41%), Positives = 310/512 (60%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I YP+   HIGH Y  + AD + RF  L G +V FTTGTDEHGQKIA  AQ
Sbjct: 2   KKNFYLTTPIYYPSDNLHIGHTYCTVAADCIKRFKELQGYNVFFTTGTDEHGQKIATKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  K +VD+   N + + + LDI YD FIR+T+ +H    + L+KK+ DKGDIYKG 
Sbjct: 62  EAGMEPKAYVDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y    E+++   +V    D           Q  +EE YFFRLS Y+DKLL    ++
Sbjct: 122 YEGYYCTPCESFWTQAQVG---DDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNN 178

Query: 184 PEFILPIERRNEVISFV---KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            EF  P  R+NE+I        GL+DLS+SR +  WG+++P D ++++YVWIDAL  YL+
Sbjct: 179 EEFTEPAFRKNELIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLS 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              +  + +    +FWPAD+H++GK+I RFHA+ WPA L++ +LPLPKK+F HG+IL   
Sbjct: 239 AIEFGTDKE-KFNEFWPADVHLVGKEIFRFHALIWPALLMALDLPLPKKIFGHGWILFDN 297

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+ P  +I+  GVDAL+YFL+RE + G DG + K+   +R+N+DLAN +GN
Sbjct: 298 DKMSKSKGNVVYPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLGN 357

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSMI K  +G+I  P    E D+ + ++   V  ++ E M++   + AL ++  L
Sbjct: 358 LLSRTVSMITKYNNGIIEKPKIEEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWKL 417

Query: 421 VSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW L K   N DR +TVLY   E +R +++L+  F+   + +I   L 
Sbjct: 418 IRRSNKYVDETTPWILAKDEKNKDRLNTVLYNLAESLRIISVLINPFITNTSKEIIRQLG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + ++     S    L P          IFPR 
Sbjct: 478 LEEKVDWESSQKWGLIPNATKVNKGQIIFPRL 509


>gi|260494223|ref|ZP_05814354.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198369|gb|EEW95885.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 636

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 209/513 (40%), Positives = 312/513 (60%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTYFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    R +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQLNGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + ++       +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 239 FENDEKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL+
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G++         D+ I S+ + V++++ + M      RAL  +   +S
Sbjct: 359 NRTLGMYKKYFNGVVVASSTAEPIDDEIKSMFNDVIKDVEKYMYLFEFSRALETIWKFIS 418

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K  T   R +TV+ +  E + ++A L+  ++P+ A KI + L + 
Sbjct: 419 RLNKYIDETMPWSLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGIN 478

Query: 481 DE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
            +  N  F  +      K G  L +   PIFPR
Sbjct: 479 KDITNVKFDDIKGWDIFKAGHKLGEA-SPIFPR 510


>gi|224009692|ref|XP_002293804.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220970476|gb|EED88813.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 579

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 244/514 (47%), Positives = 347/514 (67%), Gaps = 12/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +     I+T I Y N +PHIGHAY  +  DV+AR+ RL G DV F +GTDEHGQK+   A
Sbjct: 60  DNTPFQITTPIYYVNDKPHIGHAYTSLACDVIARYMRLSGRDVFFLSGTDEHGQKVETTA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +NA +    F D  S +F+++  +L+IS D+FIRTT++ H    + LW  + +KG IY G
Sbjct: 120 KNANMEPLAFCDMVSASFKELLTLLNISNDEFIRTTDEDHKKAVQHLWNVLVEKGAIYLG 179

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYYE 181
            Y GWYS+RDE YYN+ E+  G            V+W  +E+ YFF+LS YQD+LL+YYE
Sbjct: 180 SYEGWYSVRDECYYNESELVDGK-----APTGAEVEWVKKEDSYFFKLSEYQDELLNYYE 234

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +HP+FI P  R+NEV+SFVK GLKDLS+SR TFDWG+ +P D  ++MYVWIDALTNY++ 
Sbjct: 235 AHPDFIAPESRKNEVVSFVKGGLKDLSISRTTFDWGVPVPGDDDHVMYVWIDALTNYMSA 294

Query: 242 TGYLDNPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY +    G+  KFWPA LHV+GKDILRFHA+YWPAFLL+A +PLPK++F+HG+    G
Sbjct: 295 LGYPNTEPGGNFDKFWPASLHVVGKDILRFHAVYWPAFLLAAGIPLPKRIFAHGWWTKDG 354

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EKISKSLGNVIDP+E+I+  GVD  R+FL+ E+  G DG +  + +  +VNA+L+N +GN
Sbjct: 355 EKISKSLGNVIDPVELIDTYGVDPTRFFLMSEVVFGNDGDFSDEKMIYKVNANLSNELGN 414

Query: 361 LVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L  R ++++ K+ +  +P   G  TE+D+ +L+  + +     E + +Q IH+ +  +IS
Sbjct: 415 LNQRIMTLVFKNCNKAVPAEIGPLTEADKQLLAKAASLRGITSEAIASQSIHKYVEHMIS 474

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V + ++Y D Q PW LKKT+ +R +TVLYV +EV+R +AIL Q  +P  +N I D L V
Sbjct: 475 MVWDANKYIDVQAPWVLKKTDTERMNTVLYVLMEVMRHVAILYQPLMPTSSNVILDQLGV 534

Query: 480 ADENRCFQSLDQ---RLKPGFMLHKTFDPIFPRF 510
            ++ R F+ LD+   ++  G  + K    +FPRF
Sbjct: 535 PEDEREFEHLDKEECKIMLGREVGKPH-AVFPRF 567


>gi|290891337|ref|ZP_06554398.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429]
 gi|290478983|gb|EFD87646.1| hypothetical protein AWRIB429_1788 [Oenococcus oeni AWRIB429]
          Length = 675

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 203/524 (38%), Positives = 312/524 (59%), Gaps = 14/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ + YI+T I YP+ +  +G+ Y  ++AD +ARFHR  G DV F TGTDEHG KI +
Sbjct: 1   MTKKNRFYITTPIYYPSGKLQLGNTYTTVLADSVARFHRALGEDVFFLTGTDEHGLKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG +   ++D+ + + + +  +++ISYD FIRTT+  H    + ++KK  D+GDIY
Sbjct: 61  KAEAAGKSEMEYLDEMAVSIKKLWKLMNISYDKFIRTTDAYHERVVQHIFKKFMDEGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
           KG Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ ++EE YFF++S Y D
Sbjct: 121 KGNYTGWYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGHEVQLVKEETYFFKMSKYSD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY  HPEF+ P  R NE+I +F+K GL+DL+L+R +F+WGI +P D ++++YVWID
Sbjct: 181 WLLQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWID 240

Query: 234 ALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           AL+NY+T  GY       D+      KFWPA+L ++GK+I+RFH IYWP  L +  LPLP
Sbjct: 241 ALSNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLP 300

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +V  HG+++ K  K+SKS GNV+ P  +    G+DA+RY+L+R +  G DG +  +   
Sbjct: 301 GEVLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLRSMPFGNDGVFSPEDFV 360

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            RVN DLAN +GNL++R++SMI +  +G+IP  G     D  +    S+ ++  ++ M+ 
Sbjct: 361 NRVNFDLANDLGNLLNRTISMINRYDNGLIPKLGKLLPEDRELEETASQAVENFKDEMEK 420

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFV 466
                AL  V +L+   ++Y D  +PW L K          +      +R +  LLQ  +
Sbjct: 421 VHTADALEAVWTLIRRTNKYIDETEPWVLDKNKQRAELDDAMAHLAASLRVVGSLLQPVL 480

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +   KIFD L + +           +  G  + +   P+FPR 
Sbjct: 481 TQAPKKIFDQLGLPEVEPISNLNFADIPTGVKVVERPTPLFPRL 524


>gi|260424613|ref|ZP_05732665.2| methionine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402545|gb|EEW96092.1| methionine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 676

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 210/519 (40%), Positives = 322/519 (62%), Gaps = 14/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ K YI+T I YP+A+ HIGH Y   IAD +ARF RLDG +V+F TG+DEHGQKI +
Sbjct: 30  MTEKPKYYITTPIYYPSAKLHIGHTYCTSIADSMARFKRLDGYEVMFLTGSDEHGQKIEQ 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ +GVT   +VD     F+ +   L+IS DDFIRTTE+RH +  ++L+++  D GDIY
Sbjct: 90  KAEESGVTPIEYVDNIVALFKQLWKELNISNDDFIRTTEERHREVVQMLFQRAYDNGDIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY + DE ++ ++++              P+Q + EE YFF++S Y D+ + + 
Sbjct: 150 LGKYEGWYCIPDETFWPENKLTPE---HLCPDCGRPLQRISEEAYFFKMSKYADRWMKFI 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE+I FVK GL+DL +SR +F WGI +P DP++++YVW DAL NY+T
Sbjct: 207 EENPDFIQPASRKNEMIQFVKGGLEDLCVSRTSFTWGIPVPFDPKHVVYVWFDALVNYIT 266

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G + +      +FWPAD+H++GK+I+RFH+I WP  L+S  + LPKK++ HG+++  G
Sbjct: 267 AAG-IIDNPEKFKRFWPADVHLVGKEIVRFHSIIWPIMLMSLGIELPKKIYGHGWLIVDG 325

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DPI +++E G DA+RY+L+ +I  G+DG + ++ L  R+N+DL+N +GN
Sbjct: 326 EKMSKSKGNVVDPIPLLQEFGSDAIRYYLLNDIQLGQDGNFSRERLINRINSDLSNDLGN 385

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTE-----SDESILSVCSRVLQEIRENMQNQLIHRALA 415
           L+ RS+SM+ K  +G++    A  +         I       LQ+ R  M N  I+ A+ 
Sbjct: 386 LLHRSLSMVEKYRNGVLVHGDASVDPSIRKVSAEIEKNAEATLQKFRNGMDNWKINDAIK 445

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V + +  +++Y D   PW L K          VLY   E +R ++++++  +P  A KI
Sbjct: 446 SVWTFIRSLNKYIDVTMPWVLAKDKAKDPALDAVLYHLCEGMRFVSLMVEPVIPIAAKKI 505

Query: 474 FDILFVAD-ENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           +  L + + E   ++ L    +  G  + K   PIFPR 
Sbjct: 506 WSQLGLVNFEKANYKDLVWGGIVDGTKVAKGL-PIFPRI 543


>gi|164688857|ref|ZP_02212885.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
 gi|164602061|gb|EDQ95526.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
          Length = 648

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 205/514 (39%), Positives = 304/514 (59%), Gaps = 11/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  YI+T I YP+ + HIGH Y  +  D +ARF R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKETFYITTPIYYPSGRLHIGHTYTTVATDAIARFKRFCGYDVRFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T   ++D    + + +   +DISYDDFIRTTE RH    + ++ K+ ++GDIYKG
Sbjct: 62  KEAGMTEMEYLDGMIADIKKLWKTMDISYDDFIRTTEPRHTKIIQKIFTKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    DG             +EE YFF+LS Y+D  +     
Sbjct: 122 EYEGRYCTPCESFWTESQLV---DGDKCPDCGRETYVAKEEAYFFKLSKYED-RIKELFK 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P +  P  R NE+I +F++ GL+DL ++R TFDWGIK+P D ++++YVW+DAL NY+T 
Sbjct: 178 NPNYCFPEARANEMIANFLEPGLEDLCVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+   D    K+WPA++ V+GK+I+RFH I WPA L++ +LP+ K+VF HG+IL   +
Sbjct: 238 LGYMSEDDSLFKKYWPANIQVVGKEIIRFHTIIWPALLMALDLPVSKQVFGHGWILFAND 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++ P ++IE  G+D L+Y+L+RE A G+DG Y       R+N DLAN +GNL
Sbjct: 298 KMSKSKGNIVYPEQMIERYGIDTLKYYLLREFAFGQDGSYTHRNFITRINTDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+++M+ K   G+IP P   TE DE++    +   +   E M     H AL  V  L+
Sbjct: 358 VSRTIAMVEKYNGGIIPEPKVATEFDEALKQQAAESRRIFEEQMNKMQFHEALEGVWKLI 417

Query: 422 SEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K    +    TVLY   E IR  + L+   +   A KI+  + +
Sbjct: 418 RRTNKYIDETAPWVLAKDESKKDVLDTVLYNLCESIRIFSTLINPIMNTTAKKIYAQMGI 477

Query: 480 -ADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
             +E   ++S      +KPG  + K  + +F R 
Sbjct: 478 EGEELINWESTATFGLIKPGTKVTK-GEILFQRL 510


>gi|19704603|ref|NP_604165.1| methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|25009363|sp|Q8RE57|SYM_FUSNN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19714899|gb|AAL95464.1| Methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 636

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 208/514 (40%), Positives = 312/514 (60%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               +  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQLNGSNK---CPDCGKDLTVLKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + ++ +    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 FENDEN-KFDKFWNNSRVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G I +       D+ I S+ + V++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGTIVSSSTVEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K      R + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWTLAKNEAKKARLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNLKFDDIKEWSIFKEGHKLGEA-SPIFPR 510


>gi|237740543|ref|ZP_04571024.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422560|gb|EEO37607.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 637

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 206/515 (40%), Positives = 311/515 (60%), Gaps = 13/515 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKSMGMDTHFVTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   L+I YDDFIRTTE+RH    + + + + +KGDIYKG 
Sbjct: 62  QHGFTPQAWTDKMTPNFKNMWAALNIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               +  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQLNGSNK---CPDCGKELTVLKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + ++      KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 FENDDK-KFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP   I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G++       E D+ I ++    ++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGVVVASSTSEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  T   R + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWTLAKDETKKSRLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADENRC--FQSLDQR--LKPGFMLHKTFDPIFPRF 510
             +     F  + +    K G  L +   PIFPR 
Sbjct: 478 DKDITSLKFDDIKEWNIFKEGHQLGEA-SPIFPRI 511


>gi|299143372|ref|ZP_07036452.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517857|gb|EFI41596.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 657

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 209/509 (41%), Positives = 316/509 (62%), Gaps = 7/509 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I YP+   HIGH Y  + AD + ++ +L G DV FTTGTDEHGQKI + A  
Sbjct: 3   KKYYLTTPIYYPSGNLHIGHTYCTVAADCIKKYKKLQGYDVFFTTGTDEHGQKIQQKALE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K +VD    + +++   +DI YD FIR+T+  H    + ++KK+ +KG+IYK  Y
Sbjct: 63  EGLEPKEYVDNIVVSIKELWSKMDIDYDAFIRSTDPEHEKNVQEIFKKLYEKGEIYKSQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y  + EA++ + ++    DG             +EE YFF+LS Y+D+LL YYE HP
Sbjct: 123 EGHYCTQCEAFWTESQLK---DGDKCPDCGRETHIEKEESYFFKLSKYRDRLLKYYEDHP 179

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +FI P+ R+NE+I+   K GL DLS++R +FDWG+K+P D ++I+YVWIDAL+ YL+  G
Sbjct: 180 DFIEPVSRKNEMINNFLKDGLDDLSVTRSSFDWGVKVPFDDKHIVYVWIDALSCYLSAIG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + +    KFWPAD+H++GK+I+RFH I WPA L++ +LPLP+K+F HG+IL   +K+
Sbjct: 240 YGTDNE-KFEKFWPADVHLVGKEIIRFHTIIWPALLMALDLPLPEKIFGHGWILFDNDKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVI P  +I+  GVDAL+YFL+RE + G DG ++++   +R+N+DLAN +GNLVS
Sbjct: 299 SKSKGNVIYPEPIIKLYGVDALKYFLLREFSFGSDGSFNREKFMQRLNSDLANDLGNLVS 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +SMI K  DG IP+     E DE ++++ +  + ++   M++     AL ++ +L+  
Sbjct: 359 RIISMIEKYNDGYIPSATVSEEVDEDLINIATTTMTKVDSAMEHFEFSVALEEIWNLIRR 418

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D   PW L K   N  R  +VLY   E +R  ++L+  F+ + + +I   L V  
Sbjct: 419 CNKYVDETTPWILAKDESNKPRLDSVLYNLAEALRITSVLINPFISETSREIRKSLRVKG 478

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E +   S    L       K    +FPR 
Sbjct: 479 EVKWEDSAIWGLTEAGEHVKNVGVLFPRL 507


>gi|296329050|ref|ZP_06871556.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296153854|gb|EFG94666.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 636

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 208/514 (40%), Positives = 312/514 (60%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGFTPQAWTDKMTPNFKNMWTALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               +  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQLNGSNK---CPDCGKDLTVLKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + ++ +    KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 FENDEN-KFDKFWNNSRVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G I +       D+ I S+ + V++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGTIVSSSTAEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFI 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K      R + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWTLAKNEAKKARLAAVMNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADE--NRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
             +  N  F  + +    K G  L +   PIFPR
Sbjct: 478 DKDITNLKFDDIKEWSIFKEGHKLGEA-SPIFPR 510


>gi|229825724|ref|ZP_04451793.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC
           49176]
 gi|229790287|gb|EEP26401.1| hypothetical protein GCWU000182_01087 [Abiotrophia defectiva ATCC
           49176]
          Length = 686

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 213/516 (41%), Positives = 310/516 (60%), Gaps = 13/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+TAI Y + +PHIG+ YE+I+AD +ARF R +G DV F TGTDEHGQKI  
Sbjct: 1   MSEKKPYYITTAITYTSGKPHIGNTYEIILADAIARFKRKEGYDVRFQTGTDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG T K FVD  +R  + + D+ + SYD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  RAIEAGQTPKEFVDSVAREVKRLWDLCNTSYDRFIRTTDEDHEKQVQKIFKKLYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y    EA+Y + ++  G         H  V   EEE YFF++S Y D+L+ + 
Sbjct: 121 KGAYKGMYCTECEAFYTNSQLADGK----CPECHGEVHPAEEEAYFFKMSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++P+FI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DAL+NY+
Sbjct: 177 NNNPDFIRPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDSKHVVYVWLDALSNYI 236

Query: 240 TTTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K+WPADLH+IGKDI+RFH IYWP FL++ ++PLPK+VF H ++L
Sbjct: 237 TGLGYDADGNYGDLYKKYWPADLHLIGKDIIRFHTIYWPIFLMALDVPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNVI   ++    GVDA+RYF++ E+    DG    + + +R N+DLAN 
Sbjct: 297 QGGEKMSKSKGNVIYADDMASLFGVDAVRYFVLHEMPYENDGVITWELMAERYNSDLANT 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLVSR+V+M  K + G+I + G     D  +  +    L +I   M+      A+ ++
Sbjct: 357 LGNLVSRTVAMSNKYFGGVIESTGVEEPVDNELKEIAIGCLSKIINKMKELRAADAITEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D  +PW L K      R   VLY   E I   A LL +F+P+ + KI  
Sbjct: 417 FTLFKRCNKYIDETEPWLLAKEEDKFPRLKEVLYNLSESIMIGASLLHSFMPETSEKIAG 476

Query: 476 ILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPR 509
                 E R F  L+    LK G    +  + +F R
Sbjct: 477 AFN--SELREFSELEKFGLLKNGTRAAENPEMLFAR 510


>gi|307292797|ref|ZP_07572643.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880863|gb|EFN12079.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 520

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 241/513 (46%), Positives = 327/513 (63%), Gaps = 9/513 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I+TAI+YPN +PHIGHAYE+I  D +ARF R+   DV F TGTDEHG K+A+ A+N
Sbjct: 3   KPYTITTAISYPNGRPHIGHAYEVIATDAIARFQRMMDRDVFFQTGTDEHGLKMAQTARN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   D+ S  F+ M D L+ISYD FIRT+E  HH   + +W+ +   GD+Y G Y
Sbjct: 63  RGIEPRELADEMSSYFKAMNDGLNISYDRFIRTSEPDHHSASQAIWQAMEANGDLYLGRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+ +G  GQ  + Q  PV+W  EE +FFRLSAYQ KLL  Y   P
Sbjct: 123 EGWYSVRDEAFYDEKELTEGEGGQKLSPQGTPVEWTVEESWFFRLSAYQQKLLDLYTGQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE++ FV+ GL DLS+SR +FDWG+K+P    ++MYVW+DALTNYLT  GY
Sbjct: 183 DFIQPDSRRNEIMRFVEGGLSDLSVSRTSFDWGVKVPGSDGHVMYVWVDALTNYLTGCGY 242

Query: 245 LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            D+ +   A++W       HVIGKDI+RFH +YWPAFL+SA LPLPK+VF HGF+L++GE
Sbjct: 243 PDDLER-MARYWAEGGDITHVIGKDIVRFHTVYWPAFLMSAKLPLPKQVFGHGFLLNRGE 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV DP+E+ E  GVD LRYFL+ E+  G DG Y  + +  R N+DLAN  GNL
Sbjct: 302 KMSKSLGNVADPMELAERFGVDQLRYFLLSEVTFGNDGSYSAEAIVTRSNSDLANSFGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R++S I K+ +G +P P A  E D  +L   +   Q  +  M +     A+   +  V
Sbjct: 362 AQRTLSFIAKNLEGRLPEP-APQEVDGDLLKTVAEAAQTFQAAMVDLAPSTAIEAWMRAV 420

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              + Y DAQ PW L+KT+P R   VL    E I  LAI++Q  +P  A+ + D + VA 
Sbjct: 421 FACNAYIDAQAPWTLRKTDPARMEAVLATLYEAIAHLAIIVQPVIPASASALLDQMGVAG 480

Query: 482 ENRCFQSLDQR----LKPGFMLHKTFDPIFPRF 510
           E R + ++       L+    +     P+FPR 
Sbjct: 481 EGRNYAAIGSGWYAALRASGFVLGAPKPLFPRL 513


>gi|116491711|ref|YP_811255.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118587385|ref|ZP_01544811.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|116092436|gb|ABJ57590.1| methionyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118432209|gb|EAV38949.1| methionine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 675

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 202/524 (38%), Positives = 311/524 (59%), Gaps = 14/524 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ + YI+T I YP+ +  +G+ Y  ++AD +ARFHR  G DV F TGTDEHG KI +
Sbjct: 1   MTKKNRFYITTPIYYPSGKLQLGNTYTTVLADSVARFHRALGEDVFFLTGTDEHGLKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG +   ++D+ + + + +  +++ISYD FIRTT++ H    + ++KK  D+GDIY
Sbjct: 61  KAEAAGKSEMEYLDEMAVSIKKLWKLMNISYDKFIRTTDEYHERVVQHIFKKFMDEGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQD 174
           KG Y+GWYS+ DE Y+ +    EVY+  DG+    +    + VQ ++EE YFF++S Y D
Sbjct: 121 KGNYTGWYSVSDEEYFTESQLAEVYRDKDGKVIGGKAPSGHEVQLVKEETYFFKMSKYSD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            LL YY  HPEF+ P  R NE+I +F+K GL+DL+L+R +F+WGI +P D ++++YVWID
Sbjct: 181 WLLQYYHDHPEFLQPESRMNEMISNFIKPGLEDLALTRTSFNWGIPVPGDEKHVIYVWID 240

Query: 234 ALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           AL+NY+T  GY       D+      KFWPA+L ++GK+I+RFH IYWP  L +  LPLP
Sbjct: 241 ALSNYITALGYDPELGDFDHQPELFKKFWPANLQLVGKEIVRFHTIYWPIMLHALGLPLP 300

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            +V  HG+++ K  K+SKS GNV+ P  +    G+DA+RY+L+R +  G DG +  +   
Sbjct: 301 GEVLGHGWLVMKNGKMSKSKGNVVYPETLESRYGLDAVRYYLLRSMPFGNDGVFSPEDFV 360

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            RVN DLAN +GNL++R++SMI +  +G IP        D  +    S+ ++  ++ M+ 
Sbjct: 361 NRVNFDLANDLGNLLNRTISMINRYENGQIPKLDKLLPEDRELEETASQAVENFKDEMEK 420

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFV 466
                AL  V +L+   ++Y D  +PW L K          +      +R +  LLQ  +
Sbjct: 421 VHTADALEAVWTLIRRTNKYIDETEPWVLDKNKQRAELDDAMAHLAASLRVVGSLLQPVL 480

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +   KIFD L + +           +  G  + +   P+FPR 
Sbjct: 481 TQAPKKIFDQLGLPEVEPISNLNFADIPSGIKVVEHPTPLFPRL 524


>gi|262067595|ref|ZP_06027207.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378710|gb|EFE86228.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 640

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 210/518 (40%), Positives = 313/518 (60%), Gaps = 14/518 (2%)

Query: 1   MKE-REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK  ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ 
Sbjct: 1   MKNMKKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA+  G T + + D+ + NF++M   LDI YDDFIRTTE+RH    + + + +  KGDI
Sbjct: 61  QAAEQNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHAKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G Y +  E ++ ++++               +  ++EE YFF++S Y D LL +
Sbjct: 121 YKGEYKGKYCVSCETFFPENQLNGSNK---CPDCGKELTVLKEESYFFKMSKYADALLKH 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            + HP+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+
Sbjct: 178 IDEHPDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYI 237

Query: 240 TTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T+ G+ ++      KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+  
Sbjct: 238 TSAGFENDDK-KFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWT 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +GEK+SKS GNV+DP   I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN 
Sbjct: 297 SEGEKMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLAND 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL++R++ M  K ++G++       E D+ I ++    ++++ + M      RAL  +
Sbjct: 357 LGNLLNRTLGMYKKYFNGVVVASSTSEEIDDVIKTMFDETIKDVEKYMYLFEFSRALETI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +S +++Y D   PW L K  T   R +TV+ +  E + ++A L+  ++P+ A KI +
Sbjct: 417 WKFISRLNKYIDETMPWALAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISN 476

Query: 476 ILFVADENRC--FQSLDQR--LKPGFMLHKTFDPIFPR 509
            L +  +     F  + +    K G  L +   PIFPR
Sbjct: 477 QLGIDKDITSLKFDDIKEWNIFKEGHQLGEA-SPIFPR 513


>gi|15840435|ref|NP_335472.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792198|ref|NP_854691.1| methionyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121636936|ref|YP_977159.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148822217|ref|YP_001286971.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|215402823|ref|ZP_03415004.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215410610|ref|ZP_03419418.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215426286|ref|ZP_03424205.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215429868|ref|ZP_03427787.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445157|ref|ZP_03431909.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218752679|ref|ZP_03531475.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219556874|ref|ZP_03535950.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224989408|ref|YP_002644095.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799963|ref|YP_003032964.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           1435]
 gi|254231302|ref|ZP_04924629.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C]
 gi|254363923|ref|ZP_04979969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549993|ref|ZP_05140440.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185918|ref|ZP_05763392.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200036|ref|ZP_05767527.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204225|ref|ZP_05771716.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289442428|ref|ZP_06432172.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289446589|ref|ZP_06436333.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A]
 gi|289555210|ref|ZP_06444420.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605]
 gi|289568984|ref|ZP_06449211.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17]
 gi|289573647|ref|ZP_06453874.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85]
 gi|289744743|ref|ZP_06504121.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987]
 gi|289749536|ref|ZP_06508914.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92]
 gi|289753068|ref|ZP_06512446.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054]
 gi|289757090|ref|ZP_06516468.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85]
 gi|289761143|ref|ZP_06520521.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503]
 gi|294995197|ref|ZP_06800888.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297633534|ref|ZP_06951314.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297730519|ref|ZP_06959637.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298524503|ref|ZP_07011912.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306781942|ref|ZP_07420279.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002]
 gi|306783703|ref|ZP_07422025.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003]
 gi|306788058|ref|ZP_07426380.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004]
 gi|306792391|ref|ZP_07430693.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005]
 gi|306796794|ref|ZP_07435096.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006]
 gi|306802680|ref|ZP_07439348.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008]
 gi|306806859|ref|ZP_07443527.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007]
 gi|306967060|ref|ZP_07479721.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009]
 gi|313657848|ref|ZP_07814728.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|38258294|sp|P59952|SYM_MYCBO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13880605|gb|AAK45286.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31617786|emb|CAD93895.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA
           ligase) [Mycobacterium bovis AF2122/97]
 gi|121492583|emb|CAL71051.1| Probable methionyl-trna synthetase metS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600361|gb|EAY59371.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C]
 gi|134149437|gb|EBA41482.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148720744|gb|ABR05369.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis F11]
 gi|224772521|dbj|BAH25327.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321466|gb|ACT26069.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           1435]
 gi|289415347|gb|EFD12587.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289419547|gb|EFD16748.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A]
 gi|289439842|gb|EFD22335.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605]
 gi|289538078|gb|EFD42656.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85]
 gi|289542738|gb|EFD46386.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17]
 gi|289685271|gb|EFD52759.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987]
 gi|289690123|gb|EFD57552.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92]
 gi|289693655|gb|EFD61084.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054]
 gi|289708649|gb|EFD72665.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503]
 gi|289712654|gb|EFD76666.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85]
 gi|298494297|gb|EFI29591.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308325333|gb|EFP14184.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002]
 gi|308331486|gb|EFP20337.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003]
 gi|308335292|gb|EFP24143.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004]
 gi|308339100|gb|EFP27951.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005]
 gi|308342772|gb|EFP31623.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006]
 gi|308346681|gb|EFP35532.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007]
 gi|308350596|gb|EFP39447.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008]
 gi|308355229|gb|EFP44080.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009]
 gi|323720508|gb|EGB29590.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904766|gb|EGE51699.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis W-148]
 gi|328459706|gb|AEB05129.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           4207]
          Length = 519

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 250/510 (49%), Positives = 352/510 (69%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAIAYPNA PH+GHAYE I  D +ARF RLDG DV F TGTDEHG K+A+AA  
Sbjct: 2   KPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGYDVRFLTGTDEHGLKVAQAAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV T     +NS  F+ M + L+IS+D FIRTT+  HH+  + LW+++S  GDIY   Y
Sbjct: 62  AGVPTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++Y ++P
Sbjct: 122 SGWYSVRDERFFVESETQLVDGTRLTVETGTPVTWTEEQTYFFRLSAYTDKLLAHYHANP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVISFV  GL DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT  G+
Sbjct: 182 DFIAPETRRNEVISFVSGGLDDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGAGF 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ ++GEK+S
Sbjct: 242 PDTDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GN++DP+ + E +GVD +RYFL+RE+  G+DG Y  + +  R+N DLAN +GNL  R
Sbjct: 302 KSVGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+ DG +P PG F ++D ++L+    +L+ +R +   Q +H AL  +  ++ + 
Sbjct: 362 SLSMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLGDA 421

Query: 425 DRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++YF  Q+PW L+K+    +  R  T LYVT EV+R  A+L+Q  +P+ A KI D+L  A
Sbjct: 422 NKYFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLGQA 481

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              R F ++  RL PG  L      +FPR+
Sbjct: 482 PNQRSFAAVGVRLTPGTALP-PPTGVFPRY 510


>gi|312880384|ref|ZP_07740184.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783675|gb|EFQ24073.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 648

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 214/513 (41%), Positives = 299/513 (58%), Gaps = 8/513 (1%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E+    YI+T I Y N  PHIGHAY  I ADVLAR HR+ G    F TGTDEHGQKI 
Sbjct: 1   MSEQRTPFYITTPIYYVNDVPHIGHAYTTIAADVLARHHRMLGDPTTFLTGTDEHGQKIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA   G+T     DQ   NFR +  VL+I+ DDFIRTTE RH    + ++  + +KGDI
Sbjct: 61  QAAAAKGLTALQLADQTVENFRRLWKVLNITNDDFIRTTEPRHEKVVQHIFSTLLEKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y GWY +  E Y  + ++    +G        P+Q M E+ YFFR+S Y+  LL Y
Sbjct: 121 YLGSYEGWYCVPCETYVPEAQMG---EGNTCPDCGRPLQKMTEQSYFFRMSKYEQPLLDY 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE  PE ILP  R NE++SF++ GLKD S+SR T  WG+ +P D Q+++YVW DAL NYL
Sbjct: 178 YEGLPEAILPRTRANEILSFLRGGLKDQSISRTTMKWGVPVPGDEQHVVYVWFDALINYL 237

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY +     +  FWP   H++GKDI+RFH++ WPA LL+  L  PK+VF+HG+   +
Sbjct: 238 SALGYPEAGKPWET-FWPVAHHLVGKDIIRFHSVVWPALLLALGLQPPKRVFAHGWWTVE 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP E+ E  GVD  RYFL+RE+  G DG + +  L +R NADLAN +G
Sbjct: 297 GDKMSKSKGNVVDPFEMAERYGVDVFRYFLLREVPFGLDGDFSELALVQRSNADLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R++ M+ K   G +P+       D  +  +  R  +E+   ++      AL  + +
Sbjct: 357 NLLNRTLQMVEKYCGGQVPSAVHPEALDRELEILAGRTAEEMDRLLERFAFDEALKALWA 416

Query: 420 LVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +   ++Y D   PW L K  N +R  TVL    E +RQ A+L   F+P+ A +++D L 
Sbjct: 417 FLGRSNKYIDENLPWNLAKEGNQERLDTVLRTLFEALRQAALLSAPFLPETAQRMWDQLG 476

Query: 479 VA--DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +    E            P  +  +    +FPR
Sbjct: 477 LPGTPEGTGRSPWSFGPLPQPVQVRKAGVLFPR 509


>gi|121601643|ref|YP_989109.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120613820|gb|ABM44421.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 519

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 255/509 (50%), Positives = 354/509 (69%), Gaps = 4/509 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YPN  PHIGHAY  I +D LARF RLD  +V F +GTDEHG K+ K A+ 
Sbjct: 3   DTYYITTPIFYPNGAPHIGHAYNAIASDALARFQRLDRKNVFFLSGTDEHGLKMQKTAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +T +   D+NS  F+ M   L+ S DDFIRTTE+RHH TC+++WKK+   GDIY   Y
Sbjct: 63  LNITPQQLADRNSALFQKMLTALNCSNDDFIRTTEERHHQTCQVMWKKMEANGDIYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +GWYS+R E+YY   +     +G     +  +PV+W EEE YFFRLS Y D LL +YE +
Sbjct: 123 AGWYSVRQESYYEQKDTEIRENGIRCEKELGSPVEWNEEESYFFRLSRYGDALLEHYEKY 182

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P ERRNE+ISFVKSGLKD+S+SR  F+WG+ +P++P+++MYVW+DALTNYLT  G
Sbjct: 183 PDFIGPNERRNEIISFVKSGLKDISISRINFNWGVSVPNNPEHVMYVWVDALTNYLTAIG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + DN    K  +WPA++HV+GKDI+RFHAIYWPAFLLSA + LPK++F+HGF+ ++GEK+
Sbjct: 243 FFDNTAQ-KRDYWPANVHVVGKDIIRFHAIYWPAFLLSAGIELPKRIFAHGFLFNRGEKM 301

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP ++I+  GVD +RYF +RE+  G+DG Y  D L  RVNADLAN +GNL  
Sbjct: 302 SKSIGNVVDPFKMIDHYGVDQVRYFFLREVPFGQDGSYSHDSLVNRVNADLANDLGNLAQ 361

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SM+ K+ D  +P P  F   D+ +L    + L+  R+ M  Q  H AL+ + S+++ 
Sbjct: 362 RSLSMLQKNCDAKVPVPDTFLTQDQQLLEQSLQALEVARQTMSCQAPHLALSAIFSVIAN 421

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +RYF +++PW L+K NP R  TVLYVTVE +R++ I+L  F+P+ A K+ D L + ++N
Sbjct: 422 ANRYFASEEPWSLRKNNPKRFCTVLYVTVESLRRIGIMLLPFIPQSAAKLLDSLAIPEDN 481

Query: 484 RCFQSLDQ-RLKPGFMLHKTFDPIFPRFL 511
           R    +   R++ G  L    + IFPR++
Sbjct: 482 RLLHHISSLRIEEGTDLP-PPEAIFPRYI 509


>gi|294782393|ref|ZP_06747719.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481034|gb|EFG28809.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 637

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 208/514 (40%), Positives = 311/514 (60%), Gaps = 13/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE+RH    + + + + +KGDIYKG 
Sbjct: 62  QNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               +  ++EE YFF++S Y D LL + + H
Sbjct: 122 YEGKYCVSCETFFPENQLNGSNK---CPDCGKELTVLKEESYFFKMSKYADALLKHIDEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAG 238

Query: 244 YLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + ++      KFW     +H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GE
Sbjct: 239 FENDDK-KFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP   I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL
Sbjct: 298 KMSKSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ M  K ++G++    A  E D+ I ++    ++++ + M      RAL  +   +
Sbjct: 358 LNRTLGMYKKYFNGIVVASSASEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWRFI 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K  T   R + V+ +  E + ++A L+  ++P+ A KI + L +
Sbjct: 418 SRLNKYIDETMPWALAKDETKKARLAAVMNILSEGLYKIAFLIAPYMPESAQKISNQLGI 477

Query: 480 ADENRC--FQSLDQR--LKPGFMLHKTFDPIFPR 509
             +     F  + +    K G  L     PIFPR
Sbjct: 478 EKDITSLEFDEIKEWNIFKEGHQLGNA-SPIFPR 510


>gi|269792806|ref|YP_003317710.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100441|gb|ACZ19428.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 647

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 217/514 (42%), Positives = 307/514 (59%), Gaps = 11/514 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E    YI+T I Y N  PHIGHAY  I ADVLAR +R+ G D  F TGTDEHGQKI +
Sbjct: 1   MSESSAFYITTPIYYVNDVPHIGHAYTTIAADVLARHNRMIGRDTFFLTGTDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+T +   DQ   NF+ +  VL+I+ DDFIRTTE+RH    + ++ K+ +KGDIY
Sbjct: 61  AASAKGLTAQQLADQTVENFKRLWKVLNITNDDFIRTTEERHERVVQHIFSKLLEKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY +  E Y  + ++    +G        P+Q M EE YFFR+S YQD+LL YY
Sbjct: 121 LGSYEGWYCVPCETYVPEAQMG---EGNTCPDCKRPLQKMTEESYFFRMSKYQDRLLEYY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ESHPE ILP  R NE++SF+K GLKD S+SR T  WG+ +P D ++++YVW DAL NYL+
Sbjct: 178 ESHPEAILPKSRYNEIVSFIKGGLKDQSISRTTLTWGVPVPGDSRHVVYVWFDALINYLS 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     + KFWP   H++GKDI+RFH++ WPA L++ +L  PK VF+HG+    G
Sbjct: 238 ALGYPDEGGKWR-KFWPVCHHLVGKDIIRFHSVVWPALLMALDLEPPKMVFAHGWWTVDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNV+DP E+ E  G D  RYFL+RE+  G DG + + GL +R+N+DLAN +GN
Sbjct: 297 DKMSKSKGNVVDPFEMAELYGPDPFRYFLLREVPFGLDGDFSERGLVQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R++ M+ K   G++P+    T+ + SI ++   V  ++   ++      AL  + S 
Sbjct: 357 LLNRTLQMMTKYRGGVVPSRVCPTKLESSIRAMGEDVTAQVDSLLERFAFDEALKAIWSF 416

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y D   PW+L      +    VL    E ++  A L+  F+P  A +I+  L +
Sbjct: 417 IGRANKYIDETMPWKLGNEGRGEELDRVLRTLFEALKLSAQLVYPFMPDAAARIWSQLGL 476

Query: 480 A---DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                E R   S D       +     + +FPR 
Sbjct: 477 DGQVGEGRIRWSFD---PIPEVRVTKGEVLFPRI 507


>gi|319898928|ref|YP_004159021.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402892|emb|CBI76443.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 513

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 261/510 (51%), Positives = 354/510 (69%), Gaps = 4/510 (0%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+  YI+T I YPN  PHIGHAY  I++D LARF R DG DV F +GTDEHG K+ + AQ
Sbjct: 2   RDIYYITTPIFYPNGTPHIGHAYNAIVSDALARFQRADGKDVFFLSGTDEHGLKMQQTAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+NS  F+ M ++L+ S +DFIRTTEKRHH   + LWKK+  KGDIY G 
Sbjct: 62  MLNITPQQLADRNSAVFQKMLEILNCSNNDFIRTTEKRHHQASQELWKKMEAKGDIYLGR 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y+GWYS+  EAYY + +      G     + N PV+W EEE YFFRLS Y+  LL +YE 
Sbjct: 122 YTGWYSVSQEAYYEEKDTEIDEKGIRREKELNSPVEWNEEESYFFRLSRYEKALLQHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+ I P ERRNE+ISF+KSGLKDLS+SR TFDWG+++P +P+++MYVW+DALTNYLT  
Sbjct: 182 YPDSIGPNERRNEIISFIKSGLKDLSISRTTFDWGVRVPGNPKHVMYVWVDALTNYLTAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + D     K  FWPAD+H+IGKDI+RFH +YWPAFL+S  + LPK++F+HGF+L++G K
Sbjct: 242 DFFDETSQ-KRNFWPADIHIIGKDIIRFHTVYWPAFLMSVGIELPKRIFAHGFLLNRGVK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP E+++  G+D +RYF +RE+  G DG YD D    R+NADLAN +GNL 
Sbjct: 301 MSKSIGNVVDPFEMVDRYGLDQVRYFFLREVPFGHDGNYDHDSFVNRINADLANDLGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            RS+SMI K+ +  IPTP AF   DE +L    + L+  R+ M  Q  H AL+ + S+V+
Sbjct: 361 QRSLSMIQKNCNAKIPTPAAFLIQDEQLLKQSLQALEIARQTMSRQAPHLALSAIFSVVA 420

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E +RYF  ++PW L K NP+R  TVLY+T+E++R++ I+L  F+P+ A K+ D L VA E
Sbjct: 421 EANRYFANEEPWRLHKNNPERFFTVLYITLEILRRIGIMLLPFIPQSATKLLDSLVVAKE 480

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRFL 511
           NR    + D ++K    L     PIFPR++
Sbjct: 481 NRFLHHISDLKIKEDTELPSPV-PIFPRYI 509


>gi|260905420|ref|ZP_05913742.1| methionyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 573

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 248/474 (52%), Positives = 337/474 (71%), Gaps = 1/474 (0%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAYPN   HIGHAYE I AD +ARF RLD  +V F TGTDEHG K+ +AA   G
Sbjct: 3   YYLTTAIAYPNGAIHIGHAYEYIAADTIARFKRLDNHEVFFATGTDEHGLKMLQAANKLG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ K   D N++NFRD    L  ++D FIRTT++ H++  + +W+K+ + GDIY   Y+G
Sbjct: 63  ISPKELADDNAKNFRDTQLALGSTFDRFIRTTDEDHYEASKAIWRKLEEAGDIYLDTYAG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WYS+RDEA+Y  DE       +        V W EEE YFFRLS YQDKLL  Y++HPEF
Sbjct: 123 WYSVRDEAFYTQDETEVVDGVRLSTETRTEVTWTEEESYFFRLSNYQDKLLELYKNHPEF 182

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNEV SFV SGLKDLS+SR TFDWG+ +P + +++MYVWIDALTNYLT  GY D
Sbjct: 183 IGPDSRRNEVASFVASGLKDLSVSRTTFDWGVPVPGNEKHVMYVWIDALTNYLTAAGYPD 242

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           + +    K+WPAD+H+IGKDI+RFH++YWPAFL+SA + LPK+V +HGF+ + GEK+SKS
Sbjct: 243 DQERLD-KWWPADVHIIGKDIIRFHSVYWPAFLMSAGIELPKRVHAHGFLFNAGEKMSKS 301

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+DPI++++  G+D LR+FL RE + G DG Y KD +  R N+DLAN  GNL  RS+
Sbjct: 302 VGNVVDPIDLVDAFGLDTLRFFLFREFSYGNDGSYTKDSIITRKNSDLANEYGNLAQRSL 361

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           SMI K+ D  +P PG  T+ DE++L++   V    R ++  Q +H  +     +++E +R
Sbjct: 362 SMIAKNCDAQVPQPGELTDDDEALLALARAVPDNARRHVDTQALHLYVEACWKVLTEANR 421

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           YF AQ+PW+LKKT+PDR +TVL+VT+EV+R ++IL+Q  +P+ A KI D+L V 
Sbjct: 422 YFSAQEPWKLKKTDPDRMATVLWVTIEVVRIISILIQPVMPESAGKILDLLGVE 475



 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 467 PKLANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           P +A      +  A+ + R F +++  L+PG  L K  +P+FP+F+
Sbjct: 525 PSVAETTAGGISAAEVDPRSFAAIEYPLEPGTPLPKP-EPVFPKFV 569


>gi|290580003|ref|YP_003484395.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996902|dbj|BAH87503.1| putative methionyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 669

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 201/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTEKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            ++ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++K+  +GDIY
Sbjct: 61  KSEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +E+++  DG+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEIFRDEDGKVIGGIAPSGHEVEWVSEESYFLRLSNYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  +L +P+++ +
Sbjct: 241 ALLNYATALGYGQDDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLKMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G IP      T+ D  + +V +  L +  + M      
Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEIPAYVENVTDFDADLAAVVADNLAQYHKQMNAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K    R   + V+      +R +A L+Q F+   
Sbjct: 421 RALETVWNIISRTNKYIDETTPWVLAKDKAKRDDLAAVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +A +          L  G  +     PIFPR 
Sbjct: 481 SNAIMEQLGLAGQFDLEGLELAGLPTGIKVIAKGTPIFPRL 521


>gi|153854787|ref|ZP_01996021.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814]
 gi|149752694|gb|EDM62625.1| hypothetical protein DORLON_02019 [Dorea longicatena DSM 13814]
          Length = 646

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 204/518 (39%), Positives = 302/518 (58%), Gaps = 31/518 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI+TAIAY + +PHIG+ YE+++AD +AR+ R  G DV F TGTDEHGQKI   A
Sbjct: 6   NKGKYYITTAIAYASGKPHIGNTYEIVLADAIARYKRSQGYDVFFQTGTDEHGQKIELKA 65

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AGVT K FVD  S   + + D+++ SYD FIRTT++ H    + ++KK+ D+GDIYKG
Sbjct: 66  DEAGVTPKEFVDNASGEIKKIWDLMNTSYDKFIRTTDEDHEAQVKKIFKKLYDQGDIYKG 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++  G             +  +EE YFF++S Y D+L++Y   
Sbjct: 126 AYEGMYCTPCESFWTESQLVDGK----CPDCGRECKPAKEEAYFFKMSKYADRLINYINE 181

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP++I+YVW+DALTNY+T 
Sbjct: 182 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHIVYVWLDALTNYITG 241

Query: 242 TGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY    N      K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 242 IGYDCDGNSTELFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+   E+++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +G
Sbjct: 302 DGKMSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLG 361

Query: 360 NLVSRSVSMILKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           NLV+R++SM  K +     D  +         D  + +V     + +   M    +  A+
Sbjct: 362 NLVNRTISMTNKYFGGVVTDKGVAETEEEKAVDADLKAVTEDTPKRVDAKMDELRVADAI 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++  L    ++Y D   PW L K     DR  TVLY  +E I+  A LL++F+P+ + K
Sbjct: 422 TEIFVLFKRCNKYIDETMPWALAKDEAKKDRLETVLYNLIESIKAGAKLLESFMPETSEK 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L                     + +  + +F R 
Sbjct: 482 ILAQLG-----------------DGKVTEKPEILFARL 502


>gi|282857419|ref|ZP_06266652.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282584704|gb|EFB90039.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 651

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 220/518 (42%), Positives = 304/518 (58%), Gaps = 15/518 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I Y N  PHIGHAY  I AD +AR+ R+DG DV F TGTDEHGQK+++
Sbjct: 1   MAEKS-FYITTPIYYVNDVPHIGHAYTTIAADAMARYKRMDGCDVFFLTGTDEHGQKVSE 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G+T +   D+ ++NFRD+  ++D S DDFIRTTE RH    + ++KK+ D+GDIY
Sbjct: 60  SAAKKGMTPQQLTDELAQNFRDLLPLIDASNDDFIRTTEARHVKVVQQIFKKLLDQGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY +  E Y  +       +       H P++ MEEE YF R SAY D+LL +Y
Sbjct: 120 KGTYKGWYCVPCETYVPE---ASQGENHTCPDCHRPLKEMEEESYFLRTSAYADRLLEFY 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+HP+ I P  R NEV+SF++ G+KD S+SR +  WGI +P D ++ +YVW DAL NYLT
Sbjct: 177 EAHPDAIKPKVRYNEVVSFLRMGMKDQSISRTSVPWGIPVPGDEKHTVYVWFDALINYLT 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY  +    K KFWP   H++GKDI+RFH I WP  LL+  L  P  V+SHG+    G
Sbjct: 237 ACGYGSDEAKMK-KFWPVVNHLVGKDIIRFHCIVWPIMLLALGLTPPACVYSHGWWTRDG 295

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DP E++   G D  RYFL+R++  G DG + +  L +RVN+DLAN +GN
Sbjct: 296 EKMSKSKGNVVDPHEMVGLYGSDVFRYFLLRQVTFGFDGDFSELALVQRVNSDLANDLGN 355

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V+MI K   G +P P A    D  +         E R  M N     AL  + S+
Sbjct: 356 LLSRTVTMIEKYRGGAVPAPAALESLDVEVKEQALNAFAEYRAFMDNYQFDDALKALWSM 415

Query: 421 VSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +   ++Y D   PW+L K      R  TVL    E ++  A++L   +PK A KI+  L 
Sbjct: 416 IGRANKYIDETMPWKLGKDESLAARLDTVLATLAEELKLAALMLAPVMPKTAVKIWAQLG 475

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFD------PIFPRF 510
           +  + +  +  D R   G M  +          ++PR 
Sbjct: 476 LPGDVKDQRFGDYR--WGGMGEERPTVRRGEGVLYPRI 511


>gi|24380018|ref|NP_721973.1| methionyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|24378007|gb|AAN59279.1|AE014994_9 putative methionyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 669

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 202/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTEKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            ++ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++K+  +GDIY
Sbjct: 61  KSEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +E+++  DG+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEIFRDEDGKVIGGIAPSGHEVEWVSEESYFLRLSNYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVDFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  +L +P+++ +
Sbjct: 241 ALLNYATALGYGQDAHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLKMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G IP      T+ D  + +V +  L +  + M      
Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEIPAYVENVTDFDADLAAVVADNLAQYHKQMNAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K    R   + V+      +R +A L+Q F+   
Sbjct: 421 RALETVWNIISRTNKYIDETTPWVLAKDKAKRDDLAAVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +A +          L  G  +     PIFPR 
Sbjct: 481 SNAIMEQLGLAGQFDLEGLELAGLPTGVKVIAKGTPIFPRL 521


>gi|307708991|ref|ZP_07645451.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620327|gb|EFN99443.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 665

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 204/521 (39%), Positives = 311/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520


>gi|269120234|ref|YP_003308411.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614112|gb|ACZ08480.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 638

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 217/512 (42%), Positives = 321/512 (62%), Gaps = 9/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ST I YPNA+PH+G AY  IIADV AR+ RL G +V F+TG DEHGQKI +AA+ 
Sbjct: 3   KKFYVSTPIYYPNAKPHVGTAYTTIIADVTARYMRLKGYEVKFSTGLDEHGQKIQEAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             VT + +VD+ + NF+ +   L+IS  +FIRTTE+RH  + + + K++ + GDIYKG Y
Sbjct: 63  NNVTPQEWVDRMAENFKALWKKLNISNTEFIRTTEERHKISVKKMIKRVYENGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y + DE +  D+ V +G    +       V   +E  YFF+LS YQD+LL Y E +P
Sbjct: 123 KGLYCVSDETFVPDNSVLEGNKCPHCGKDLIEV---KENSYFFKLSKYQDRLLKYIEENP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FILP  R+NEV+SF+  GL+DLS+SR TF+WGI +  +  +++YVW DALTNY+T  G+
Sbjct: 180 DFILPSYRKNEVVSFINQGLQDLSISRTTFNWGIPLELEEGHVIYVWFDALTNYITVAGF 239

Query: 245 LDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            D+    +  +    + H++GKDILRFHAI WPA L+SA +PLP  V +HG+   +GEK+
Sbjct: 240 GDDEKKFEDIWIDGKVMHLMGKDILRFHAIIWPAMLMSAGIPLPDTVAAHGWWTVEGEKM 299

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+E +E+ G+D  RY+L+RE+  G DG Y + G+ +R+NADLAN +GNL++
Sbjct: 300 SKSKGNVVDPLEEVEKYGLDPFRYYLMREVTFGLDGDYSQKGMIQRINADLANDLGNLLN 359

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M  K +D  +      T  +E I ++    +++I    +       L  V   +S 
Sbjct: 360 RTIGMQKKYFDSAVVLEKEETALEEEIYALWKTTVEDIDTYFEKVQFSEVLKAVWKFISR 419

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++Y D   PW L K   N  R STV+Y  VE + ++A+L+  F+P+ A K+++ L + D
Sbjct: 420 MNKYIDETAPWILAKDPENKSRLSTVMYNLVESLYKIAVLISPFMPETAQKMWNQLGIND 479

Query: 482 --ENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             EN     +    + P   +     PIFPR 
Sbjct: 480 SIENIRLDDIKHWGVYPVNNILGEATPIFPRI 511


>gi|307297529|ref|ZP_07577335.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916789|gb|EFN47171.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 635

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 209/508 (41%), Positives = 315/508 (62%), Gaps = 7/508 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++T I Y N++PHIG AY  I+ADV+AR+ RL G DV F TGTDEHGQK+   A  
Sbjct: 2   EKFYVTTPIYYINSEPHIGSAYSTIVADVIARYRRLSGYDVFFLTGTDEHGQKVLNEAIE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V  + + D+ +  F+ +   L+++ D F+RTT++ H  T +    K+ + GD+YKG Y
Sbjct: 62  RNVEAQKYCDEMAEKFKALWKELELTNDAFVRTTDEYHMKTVQTFVSKLKENGDVYKGKY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY + DE ++N++++    +G+        V+W+ EE YFFRLS Y D LL +Y+ +P
Sbjct: 122 EGWYCIPDETFWNEEDLK---EGRTCPECGREVKWVSEENYFFRLSKYNDILLRFYKENP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++  ++SGLKDLS++R +FDWG+ +PDDP++++YVW+DAL NYL+  GY
Sbjct: 179 QFVQPDFRRNEMLRILESGLKDLSITRTSFDWGVPMPDDPEHVIYVWVDALINYLSAIGY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N D    ++WPAD+H+IGK+I RFH+I WPA LLSA LPLPK++++HG++   G+KIS
Sbjct: 239 PHNIDH-FERYWPADVHLIGKEINRFHSIIWPAMLLSAGLPLPKQIYAHGWLTVNGQKIS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN I P+  +   G DALRY+L+R+I  G+DG + +  L  R+NADLAN +GNL+ R
Sbjct: 298 KSLGNAISPVAFVRTYGNDALRYYLLRDIQFGRDGDFSETNLISRINADLANDLGNLLHR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +V MI K  DG +P        DE ++ +  +      E+M N    +AL  V  L+   
Sbjct: 358 TVVMIQKFNDGAVPERSITETIDEDLVELGEKTFSAYTESMDNMRFTQALESVWELIRFG 417

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW++ K      R  TVL+  V  ++ ++I+++  + + A +I   L     
Sbjct: 418 NKYIDLTEPWKMGKKPEMKGRLDTVLHNLVCTLKNVSIMIEPVMFRTAREIRKRLGFGGT 477

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                     +  G       +PIFPR 
Sbjct: 478 MTLENVSWSDIVAG-KRVSHGEPIFPRI 504


>gi|94496391|ref|ZP_01302968.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424137|gb|EAT09161.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 520

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 236/513 (46%), Positives = 332/513 (64%), Gaps = 9/513 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I+TAI+YPN +PHIGHAYE+I  D +ARF R+ G DV F TGTDEHG K+A+ A+ 
Sbjct: 3   KPFTITTAISYPNGRPHIGHAYEVIATDAIARFQRMMGRDVFFQTGTDEHGLKMAQTARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   D+ +  F+ M + L+IS+D FIRT+E  HH   + +W+ +   GD+Y G Y
Sbjct: 63  RGIEPRALADEMAGYFKVMNEALNISHDRFIRTSEPDHHRASQAIWRAMEANGDLYLGRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+ +G  G   + Q+ PV+W  EE +FFRLSAYQDKLL+ YES P
Sbjct: 123 EGWYSVRDEAFYDEKELIEGEGGAKLSPQNTPVEWTVEESWFFRLSAYQDKLLALYESQP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNE++ FV+ GL DLS+SR +FDWG+++PD   ++MYVW+DALTNYLT  GY
Sbjct: 183 DFIQPESRRNEIMRFVEGGLSDLSISRTSFDWGVRVPDADGHVMYVWVDALTNYLTGCGY 242

Query: 245 LDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            D+ +   A++W       HVIGKDI+RFHA+YWPAFL+SA LPLPK++F HGF+L++GE
Sbjct: 243 PDDAER-MARYWAEGGDITHVIGKDIVRFHAVYWPAFLMSAKLPLPKQIFGHGFLLNRGE 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV DP+E+ +  GVD LRYFL+ E+  G DG Y  + +  R N+DLAN  GNL
Sbjct: 302 KMSKSLGNVADPMELADRFGVDQLRYFLLSEVTFGNDGSYSAEAIIARSNSDLANSFGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R++S I K+ DG +P P A  E D ++LS  +   +  +  M +     A+   +  V
Sbjct: 362 AQRTLSFIAKNLDGRLPEPAAM-EVDSALLSGIADACRIFQNAMNDLAPSVAIEAWMRAV 420

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              + Y DAQ PW L+KT+P R   VL    E I  LA+++Q  +P  A  + D + +  
Sbjct: 421 FACNAYIDAQAPWALRKTDPARMEAVLATLYEAIASLAVMIQPVIPASAAALLDQMGIDA 480

Query: 482 ENRCFQSLDQ----RLKPGFMLHKTFDPIFPRF 510
           + R ++ +       L+          P+FPR 
Sbjct: 481 DARSYELIGSDFYAALRASGFALSPPKPLFPRL 513


>gi|322375421|ref|ZP_08049934.1| methionine--tRNA ligase [Streptococcus sp. C300]
 gi|321279684|gb|EFX56724.1| methionine--tRNA ligase [Streptococcus sp. C300]
          Length = 665

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 203/521 (38%), Positives = 311/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD      +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDDHTNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M      
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMDAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520


>gi|288574650|ref|ZP_06393007.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570391|gb|EFC91948.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 646

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 313/515 (60%), Gaps = 9/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  YI+T I Y N  PHIGHAY  I ADV++R+ R+DG  V F TGTDEHGQKI +
Sbjct: 1   MSDSKHFYITTPIYYVNDVPHIGHAYTTIGADVMSRYKRMDGYKVFFLTGTDEHGQKIYE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G+T +   D+ + NF+ +  VL+IS DDFIRTTEKRH    + ++ K+ D+GDIY
Sbjct: 61  SAKAKGMTAQELTDEMAENFKRLLPVLNISNDDFIRTTEKRHERVVQSIFSKLMDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E Y  +  +    +         P+  MEEE YFF+ S Y D+LL YY
Sbjct: 121 KGTYKGLYCVPCETYVPESSMG---ENNTCPDCGRPLVEMEEESYFFKTSRYADRLLKYY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+ I+P  R NE++SF+KSGL+D S+SR +  WGI +P D ++++YVW DAL NYLT
Sbjct: 178 EDNPKAIMPKTRYNEIVSFIKSGLRDQSVSRTSISWGIPVPGDEKHVIYVWFDALINYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D+P+   A FWP   H++ KDI+RFH + WP  +++  L  P  VFSHG+   +G
Sbjct: 238 ACGYEDDPEKL-AAFWPNAHHLMAKDIIRFHCVIWPIMVMALGLNPPVGVFSHGWWTMEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DP E+++  G DA RYFL+R++  G DG + +  + +R+N+DLAN +GN
Sbjct: 297 EKMSKSKGNVVDPFEMVDLYGADAFRYFLLRQVPFGMDGDFSEAAMAQRINSDLANDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+VSM+LK  DG++P+P   +  D  +  V  + L   RE M +     AL     L
Sbjct: 357 LLSRTVSMVLKYRDGIVPSPSDLSPLDIELSEVARKALDTYREKMDDFTFDEALKAAWGL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   ++Y D   PW+L           VL+  VE ++ +++++  F+P+  ++++  L  
Sbjct: 417 IGRANKYIDETMPWKLGNEGSKEPLDAVLWGLVESLKLVSMMISPFMPETGHRVWSQLGF 476

Query: 480 ADE--NRCFQSLDQRLKPGFMLH--KTFDPIFPRF 510
             +  N  ++          ML   ++ D +FPR 
Sbjct: 477 CGDPANLQWEHYRWGEPTAGMLSVCRSKDVLFPRI 511


>gi|322386045|ref|ZP_08059684.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269889|gb|EFX52810.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 665

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 197/521 (37%), Positives = 311/521 (59%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTTKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYAGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 181 RLVEFFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPRHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 241 ALLNYVTALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPVLLMMLDVKLPERLIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V ++ + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVAAQSITDYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A +++ F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  +     PIFPR 
Sbjct: 481 SKAVLSQLGLPQAVSLENLAIDQLPAGLTVVDKGTPIFPRL 521


>gi|294785169|ref|ZP_06750457.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486883|gb|EFG34245.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 636

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 311/514 (60%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQLNGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + ++       +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 239 FENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL+
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G+I         D+ I ++   +++++ + M      RAL  +   +S
Sbjct: 359 NRTLGMYKKYFNGVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L + 
Sbjct: 419 RLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGID 478

Query: 481 DE--NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +  N  F  + +    K G  L +   PIFPR 
Sbjct: 479 KDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPRI 511


>gi|224541065|ref|ZP_03681604.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525989|gb|EEF95094.1| hypothetical protein CATMIT_00216 [Catenibacterium mitsuokai DSM
           15897]
          Length = 642

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 204/515 (39%), Positives = 313/515 (60%), Gaps = 9/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+ +  Y++TAI Y + +PHIG+ YE++++D + R  R  G +V F TGTDEHGQKI  
Sbjct: 1   MKDPKDFYLTTAITYTSGKPHIGNTYEIVLSDAICRAKRQQGYNVRFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  K +VD+ +   + + D++D++YD FIRTT++ H    + ++KK+ DKGDIY
Sbjct: 61  KAKEAGIEPKEYVDKVAAEVKRIWDMMDVTYDKFIRTTDEYHVKQVQKIFKKLHDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y    E+++ + ++  G            V   +EE YFF+LS YQD+L+ YY
Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGK----CPDCGGEVHDAKEEAYFFKLSKYQDRLMQYY 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             HPEFI P  R+NE+++   K GL+DL +SR +F W I +  DP++++YVWIDAL NY+
Sbjct: 177 NDHPEFIQPESRKNEMVNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDALVNYI 236

Query: 240 TTTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      ++WPAD+HVIGKDI+RFH IYWP  L++ +LPLPK+VF H ++L
Sbjct: 237 TGLGYDLDGNNDELFNRYWPADVHVIGKDIVRFHTIYWPIILMALDLPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SK LGNVI   ++++  GVDA+RY+L+ EI    DG    D L +R+N+DLAN 
Sbjct: 297 MGDSKMSKHLGNVIYADDLVDLFGVDAVRYYLLHEIPYDNDGSITWDLLVERINSDLANI 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+++M  K +DG++         D+ + S+   + ++  +      + +AL ++
Sbjct: 357 LGNLVNRTIAMCNKYFDGVVTNTNVCEPVDDELKSIALAMPEKTIKLENEFKLAKALDEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L+   ++Y D   PW L K  T  DR +TVLY  VE IR  AI L+ F+P  + KI D
Sbjct: 417 YVLLRRTNKYIDDTMPWTLAKDETKKDRLATVLYNLVEAIRFSAIALEPFIPGTSKKILD 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++   + +          K G  +    + +F R 
Sbjct: 477 MINTDERDMMKLDTFGSYKSGTKVTDHPEVLFARL 511


>gi|327474600|gb|EGF20005.1| methionine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 666

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 311/521 (59%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ +G++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEESGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINF 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D  +  V S  + +  ++M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGPLAQVASESIADYYKHMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K        + V+      +R +A +++ F+ + 
Sbjct: 421 RALEVVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLTASLRVVAHMIEPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +   +        +L  G ++ +   PIFPR 
Sbjct: 481 SKAVLSQLGLPQADSLENLAIDQLPAGLIVVEKGTPIFPRL 521


>gi|255657488|ref|ZP_05402897.1| methionyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449084|ref|ZP_06890874.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879907|ref|ZP_06903880.1| methionine--tRNA ligase [Clostridium difficile NAP07]
 gi|296262177|gb|EFH08982.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429196|gb|EFH15070.1| methionine--tRNA ligase [Clostridium difficile NAP07]
          Length = 645

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 206/514 (40%), Positives = 303/514 (58%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG
Sbjct: 62  IEQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    +G            ++EE YFFRLS Y+D  L     
Sbjct: 122 EYEGRYCTPCESFWTESQLL---EGNKCPDCGRETYLVKEESYFFRLSKYED-RLKELFK 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              F  P  R+NE++ +F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T 
Sbjct: 178 DDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +
Sbjct: 238 LGYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADD 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+M+ K  +G+IPT    T+ D  +        +     M     H AL  V  LV
Sbjct: 358 ISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLV 417

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K     D   TVLY   E IR +A L+   + + ANKI++ + +
Sbjct: 418 RRTNKYIDETMPWALAKDEAKKDELDTVLYNLCESIRIIATLINPIMNETANKIYEHIGI 477

Query: 480 A--DENRCFQSLDQRLKPGFML-HKTFDPIFPRF 510
              D+   ++S       G  +     +P+FPR 
Sbjct: 478 KGQDDITTWESTKTFGLIGENVKVFKGEPLFPRL 511


>gi|254977164|ref|ZP_05273636.1| methionyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094494|ref|ZP_05323972.1| methionyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255316245|ref|ZP_05357828.1| methionyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518906|ref|ZP_05386582.1| methionyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652085|ref|ZP_05398987.1| methionyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685058|ref|YP_003216343.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260211221|emb|CBA66728.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214733|emb|CBE07412.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 645

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 304/514 (59%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG
Sbjct: 62  IEQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    +G            ++EE YFFRLS Y+D  L     
Sbjct: 122 EYEGRYCTPCESFWTESQLL---EGNKCPDCGRETYLVKEESYFFRLSKYED-RLKELFK 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              F  P  R+NE++ +F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T 
Sbjct: 178 DDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +
Sbjct: 238 LGYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADD 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+M+ K  +G+IPT    T+ D  +        +     M     H AL  V  LV
Sbjct: 358 ISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLV 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K  T  D   TVLY   E IR +A L+   + + ANKI++ + +
Sbjct: 418 RRTNKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYEHIGI 477

Query: 480 A--DENRCFQSLDQRLKPGFML-HKTFDPIFPRF 510
              D+   ++S       G  +     +P+FPR 
Sbjct: 478 KGQDDITTWESTKTFGLIGENVKVFKGEPLFPRL 511


>gi|21909836|ref|NP_664104.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|25009347|sp|P59080|SYM_STRP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21904022|gb|AAM78907.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
          Length = 665

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 199/518 (38%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  V    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|270292555|ref|ZP_06198766.1| methionine--tRNA ligase [Streptococcus sp. M143]
 gi|270278534|gb|EFA24380.1| methionine--tRNA ligase [Streptococcus sp. M143]
          Length = 679

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 203/521 (38%), Positives = 311/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSISDYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 494 SRAVLAQLGLAEVSSLENLSLTDFPAGVTVVAKGTPIFPRL 534


>gi|315221903|ref|ZP_07863814.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188869|gb|EFU22573.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 665

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 205/523 (39%), Positives = 316/523 (60%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++ ++LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDSMAVGVKELWELLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++   G+         + V+W+ EE YF RL  Y D
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLEEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 180 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY  + D +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 240 ALLNYATALGYGQDADANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 300 AHGWFVMKDGKMSKSKGNVVYPEILVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K +DG +P      TE D  + +V +  +    + M     
Sbjct: 360 YELANDLGNLLNRTVAMINKYFDGQVPIYKENVTEFDADLAAVVAENIAIYHKQMDAVDY 419

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +++S  ++Y D   PW L K     D  + V+   V  +R +A L+Q F+  
Sbjct: 420 PRALEAVWNIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLVASLRVVAHLIQPFMMT 479

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +    ++LD   L  G  +     PIFPR 
Sbjct: 480 TSNAIMEQLGLGTD-FDLENLDLAELPTGLTVVAKGTPIFPRL 521


>gi|260655495|ref|ZP_05860983.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629943|gb|EEX48137.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 642

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 219/509 (43%), Positives = 311/509 (61%), Gaps = 8/509 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N  PHIGHAY  I ADV+ARF R+ G DV F TGTDEHGQK+A+AA  
Sbjct: 3   KSFYITTPIYYVNDIPHIGHAYTTIAADVMARFKRMSGYDVFFLTGTDEHGQKVAQAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +   D  S  FR++  V+  S DDFIRTT++RH  T + +++K+  +GDIYKG Y
Sbjct: 63  KGVDPQKLTDGLSEKFRELLPVIGASNDDFIRTTQERHIKTVQAIFQKLLAQGDIYKGTY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  EAY  +       +G+       P+  MEEE YF R SA+ DKLL++YE++P
Sbjct: 123 KGLYCVPCEAYVPES---SAGEGRTCPDCGRPLIEMEEESYFLRTSAWADKLLAFYEANP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             I P +R NEV+SF++ GLKD S+SR T  W I +P D ++ +YVW DAL NYLT  GY
Sbjct: 180 NAIGPQQRYNEVVSFLRGGLKDQSISRTTVKWAIPVPGDERHTIYVWFDALINYLTACGY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +     A FWP   H++GKDI+RFH I WP  L+   L  PK+VFSHG+   +GEK+S
Sbjct: 240 GTDQKKMDA-FWPEVNHLVGKDIIRFHCIIWPIMLMMLGLTPPKQVFSHGWWTVEGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN ++P E+I   G DA RYFL R++  G DG + ++ L K++N+DLAN +GNL+SR
Sbjct: 299 KSKGNAVNPHEMIGRYGRDAFRYFLFRQMPFGLDGDFSEEALAKQINSDLANDLGNLLSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +V+M +K  +G++  P      DE + ++ ++  +E R  M       AL  + SL+S  
Sbjct: 359 TVTMAVKYQEGVVAAPQKREALDEEVAALGAKTAEEYRSLMDGYGFEDALKALWSLISRA 418

Query: 425 DRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA--D 481
           ++Y D   PW+L    N +R + VLY   EV+R  A+ +  F+P+ AN+I++ L +A   
Sbjct: 419 NKYIDETMPWKLSGPENAERLNQVLYTLCEVLRLSALGVAPFMPESANRIWEQLGLAGSP 478

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+  ++S        +  H   D +FPR 
Sbjct: 479 ESVGWESWKWGGVEEYRTH-RGDALFPRI 506


>gi|319939574|ref|ZP_08013933.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811163|gb|EFW07469.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 679

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 202/523 (38%), Positives = 311/523 (59%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MTEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGIIPQAYVDSMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G+         + V+W+ EE YF RL  Y D
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 193

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY  +   +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 254 ALLNYATVLGYGQDDHANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 313

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 314 AHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 373

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K +DG +P      TE D  + +V +  +    + M     
Sbjct: 374 YELANDLGNLLNRTVAMINKYFDGQVPIYKENVTEFDADLAAVVAENIAIYHKQMDAVDY 433

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +++S  ++Y D   PW L K     D  + V+   V  +R +A L+Q F+  
Sbjct: 434 PRALEAVWNIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLVASLRVVAHLIQPFMMT 493

Query: 469 LANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +    ++LD   L  G  +     PIFPR 
Sbjct: 494 TSNAIMEQLGLGTD-FDLENLDLAELPTGLTVVAKGTPIFPRL 535


>gi|28896469|ref|NP_802819.1| methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|28811720|dbj|BAC64652.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 666

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 199/518 (38%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  V    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|313906147|ref|ZP_07839496.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469034|gb|EFR64387.1| methionyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 662

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 209/512 (40%), Positives = 318/512 (62%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y++TAIAY + +PHIG+ YE+++AD +ARF R+ G +V F TGTDEHGQKI   A  
Sbjct: 7   ENYYMTTAIAYASGKPHIGNTYEIVLADSIARFRRMQGYNVFFQTGTDEHGQKIENKATE 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT K +VD  +   R + D+++ SYD FIRTT+  H    + ++KK+ DKGDIY G Y
Sbjct: 67  AGVTPKQYVDNTAGEIRRIWDLMNTSYDKFIRTTDDYHEAQVQKMFKKMFDKGDIYLGSY 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E+++ + ++  G            V    E  YFFR+S Y  KL+ +  SHP
Sbjct: 127 EGWYCTPCESFWTESQLVDGK----CPDCGREVTKANEPAYFFRMSKYAQKLIDHINSHP 182

Query: 185 EFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +FI P+ R+NE+++     GL+DL +SR +F WGI +  DP++++YVW+DALTNY+T  G
Sbjct: 183 DFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITGIG 242

Query: 244 YLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y  + + +    KFWPADLH+IGKDI+RFH IYWP FL+S +LPLPK+VF H +++    
Sbjct: 243 YDCDGNHTEQFGKFWPADLHLIGKDIIRFHTIYWPIFLMSLDLPLPKQVFGHPWLIQADG 302

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    D + +R+N+DLAN +GNL
Sbjct: 303 KMSKSKGNVIYADDLVDMFGVDAVRYFVLHEMPFENDGVISWDLMVERMNSDLANTLGNL 362

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R++SM  K + G++   GA    D+ + +V +   Q++ + M++  +  A++++ +L 
Sbjct: 363 VNRTISMSNKYFGGVVENRGAAEPVDDELKAVVTSTAQKVEDKMKDLHVADAISEIFTLF 422

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW + K     DR +TV+Y  VE I   A LL+ ++P+   KI   L  
Sbjct: 423 KRCNKYIDETTPWVIAKDEAKQDRLATVMYNLVESIIIGASLLRPYLPETTEKILAQLNA 482

Query: 480 ADENRCFQSLDQRL--KPGFMLHKTFDPIFPR 509
            +  R ++ LDQ    + G  +    + +F R
Sbjct: 483 KE--RDYEVLDQFGLYESGTKVTDQPEILFAR 512


>gi|34764087|ref|ZP_00144966.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27886141|gb|EAA23438.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 636

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 206/514 (40%), Positives = 311/514 (60%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQLNGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + ++       +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 239 FENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL+
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++G+I         D+ I ++   +++++ + M      RAL  +   +S
Sbjct: 359 NRTLGMYKKYFNGVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L + 
Sbjct: 419 RLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGID 478

Query: 481 DE--NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +  N  F  + +    K G  L +   P+FPR 
Sbjct: 479 KDITNVKFDDIKEWNIFKEGHKLGEA-SPVFPRI 511


>gi|225849056|ref|YP_002729220.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643562|gb|ACN98612.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 626

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 216/509 (42%), Positives = 310/509 (60%), Gaps = 11/509 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+T I Y N  PH+GHAY  I  DV+AR++R  G+D  F TGTDEHGQKI KAA+
Sbjct: 2   QNKFYITTPIYYVNDVPHLGHAYTTIACDVMARYYRQKGVDTFFLTGTDEHGQKIQKAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  K   D+   +F+++ + L+ISYD FIRTT+  H    + +++K  + GDIY   
Sbjct: 62  EKGIHPKELADKTHLSFKNLWEKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLAE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  +Y +  E +  + E+              P + ++EE YFFRLS Y +KLL +YE +
Sbjct: 122 YESYYCVGCEEFKTETEIKDYD--YKCPIHLKPCEKVKEESYFFRLSKYTEKLLEFYEKN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           P+FI P  RRNEV+SFVK GLKDLS+SR      WGI +P D  + +YVW DALTNYLT 
Sbjct: 180 PDFIQPDFRRNEVVSFVKQGLKDLSVSRKKDRVWWGIPVPFDESHTIYVWFDALTNYLTA 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D    +  KFWPAD+HV+GKDILRFHA+YWPAFL+SA + +PKKVF+HG+   +G 
Sbjct: 240 VGYPD----NLNKFWPADVHVVGKDILRFHAVYWPAFLMSAGIEIPKKVFAHGWWTVEGH 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP +  +E GVD LRYFL+RE+  G DG +    +  R+N+DLAN +GNL
Sbjct: 296 KMSKSLGNVVDPFKAADEYGVDQLRYFLLREVPFGLDGDFSNQAVVNRINSDLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSRS++MI K  +G I      T+ ++   ++  + ++   + + N    R+L +V   +
Sbjct: 356 VSRSLTMIQKFQEGNILPYTQLTDLEDEYKNIYEKTIENFDKYLSNLEFSRSLEEVWQFI 415

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +++Y    +PW+L K N +   TVLYV  + I  +  +L+ F+P    +  ++L   +
Sbjct: 416 DWLNKYIVKVEPWKLNKENKEYLKTVLYVLADGIYAILWMLKPFMPTKIQEALNMLGYNE 475

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                Q     L     + +   P+FPR 
Sbjct: 476 VKNSIQPFS--LPTNIKIQE-VKPLFPRI 501


>gi|320547307|ref|ZP_08041598.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448005|gb|EFW88757.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 666

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 307/521 (58%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + +  +LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 241 ALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G +P      TE D  + ++ +  + E  + M      
Sbjct: 361 ELANDLGNLLNRTVAMINKYFGGEVPAYVENVTEFDADLAALVAEKITEYHKQMNAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V S++S  ++Y D   PW L K     D  + V+      +R +A L+Q F+   
Sbjct: 421 RALDAVWSIISRTNKYIDETAPWVLAKDEAKRDELAAVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                G  +     PIFPR 
Sbjct: 481 SNAIMEQLGLGANFDLENLALSGFPEGVKVVAKGTPIFPRL 521


>gi|225869985|ref|YP_002745932.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699389|emb|CAW92834.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 667

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 314/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI  
Sbjct: 1   MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMLGYDVFYLTGLDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++ + +VD  +   + +  +LDISYD FIRTT   H +    +++++  + DIY
Sbjct: 61  KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTGDYHEEVVAAVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EVY+   G+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGTYSGWYSVSDEEFFTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++++ P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +
Sbjct: 241 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T  D  +  V +  + E  + M+     
Sbjct: 361 ELANDLGNLLNRTVAMINKYFDGRVPAYVRNVTAFDADLEQVVADHISEYHKQMEAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++ ++V+      +R +A L+Q F+   
Sbjct: 421 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIQPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  I + L +  +    +     L  G  +    +PIFPR 
Sbjct: 481 SAAIMEQLGLGAKYHLEELDLADLPTGVTVVAKGEPIFPRL 521


>gi|195977657|ref|YP_002122901.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974362|gb|ACG61888.1| methionyl-tRNA synthetase MetG [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 672

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/521 (37%), Positives = 313/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI  
Sbjct: 6   MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQD 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++ + +VD  +   + +  +LDISYD FIRTT+  H +    +++++  + DIY
Sbjct: 66  KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIY 125

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    E+Y+   G+         + V+W+ EE YF RLS Y D
Sbjct: 126 LGTYSGWYSVSDEEFFTESQLAEIYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 185

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++++ P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWID
Sbjct: 186 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWID 245

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +
Sbjct: 246 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 305

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 306 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 365

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T  D  +  V +  + E  + M+     
Sbjct: 366 ELANDLGNLLNRTVAMINKYFDGRVPAYVKNVTAFDADLEQVVADHISEYHKQMEAVDYP 425

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++ ++V+      +R +A L+  F+   
Sbjct: 426 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIWPFMMTT 485

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  + + L +       +     L  G  +    +PIFPR 
Sbjct: 486 SAAMMEQLGLDATYHLEELDLADLPTGVTVVAKGEPIFPRL 526


>gi|325288365|ref|YP_004264546.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963766|gb|ADY54545.1| methionyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 655

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 216/510 (42%), Positives = 316/510 (61%), Gaps = 10/510 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I YPNA PHIG AY  I AD +AR  R+ G DV F TGTDE+ QKI + A++ 
Sbjct: 2   KYYITTPIYYPNASPHIGTAYTTIAADAMARLRRMMGDDVYFLTGTDENAQKIVRTAESK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +VD     F+++  +LDIS DDFIRTTE+RH    +  + K+ ++GDIYK  Y 
Sbjct: 62  GMAPLDYVDNIVAKFKELWRILDISNDDFIRTTEERHAKVVQHFFTKLFEQGDIYKSEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY    E ++ ++ + +G            V+ ++EE YFFRLS YQD+LL Y +++PE
Sbjct: 122 GWYCTPCETFWTENRLVEGRCPN--LDCGREVELLKEESYFFRLSKYQDRLLEYIKANPE 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P+ RRNE+I F++SGL+DL ++R TF+WGI++P DP++++YVW+DAL NY++  GY 
Sbjct: 180 FIQPVSRRNEMIKFIESGLEDLCVTRTTFEWGIQVPFDPKHVVYVWLDALINYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKIS 304
                   ++WPADLH++GKDI+RFH + WP  L++  +PLPKKVF HG+ +  +G KIS
Sbjct: 239 -PDGEKYQRYWPADLHLVGKDIVRFHTVIWPIILMAMEIPLPKKVFGHGWFMSKEGGKIS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV D  E+I   G D +RYFL++E+  G DG Y +D L +++N+DLAN +GN +SR
Sbjct: 298 KSRGNVQDSFELIARYGSDPIRYFLLKEMQYGLDGTYSEDDLVEKLNSDLANDLGNFISR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++M+ K  DG++P PG  +  D+ +  +   V   I E M +    +A+  +   VS  
Sbjct: 358 SLAMVEKYRDGIVPEPGEDSVLDKELKELAVSVKTGIEEKMLDCDTAKAIEYLWQFVSRC 417

Query: 425 DRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L +      R  TVLY  +E IR L +    F+P +  K+  +L   + 
Sbjct: 418 NKYVDETAPWALARDPEQKCRLDTVLYNLIEAIRILGVFCAPFMPGIPLKLQPLLNSGNL 477

Query: 483 NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
              +    +   + PG  + K  DPIFPR 
Sbjct: 478 FTKWNDAGKWKIIVPGTKVIK-GDPIFPRI 506


>gi|322376351|ref|ZP_08050844.1| methionine--tRNA ligase [Streptococcus sp. M334]
 gi|321282158|gb|EFX59165.1| methionine--tRNA ligase [Streptococcus sp. M334]
          Length = 665

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 201/521 (38%), Positives = 312/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQSYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVDFFKAHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      TE D ++ +V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQVPAYVEGVTEFDHALANVAEQSIADYHTHMEAIDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 520


>gi|256845534|ref|ZP_05550992.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719093|gb|EEU32648.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 636

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 206/514 (40%), Positives = 311/514 (60%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDTVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQLNGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + ++       +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 239 FENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P + I++ GVDA RY+L+RE+  G DG Y   G+  R+N+DLAN +GNL+
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREVNFGTDGDYSTKGIIGRLNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++ +I         D+ I ++   +++++ + M      RAL  +   +S
Sbjct: 359 NRTLGMYKKYFNSVIVASSTAEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L + 
Sbjct: 419 RLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGID 478

Query: 481 DE--NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +  N  F  + +    K G  L +   PIFPR 
Sbjct: 479 KDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPRI 511


>gi|225869045|ref|YP_002744993.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702321|emb|CAX00124.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 667

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 313/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI  
Sbjct: 1   MTKKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGYDVFYLTGLDEHGQKIQD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ AG++ + +VD  +   + +  +LDISYD FIRTT+  H +    +++++  + DIY
Sbjct: 61  KAQEAGLSPQAYVDGMAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EVY+   G+         + V+W+ EE YF RLS Y D
Sbjct: 121 LGTYSGWYSVSDEEFFTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++++ P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWID
Sbjct: 181 RLVAFFKAQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  +LP+P+++ +
Sbjct: 241 ALLNYATALGYGQKDHANFDKFWSGRVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T  D  +  V +  + E  + M+     
Sbjct: 361 ELANDLGNLLNRTVAMINKYFDGRVPAYVKNVTAFDADLEQVVADHISEYHKQMEAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++ ++V+      +R +A L+  F+   
Sbjct: 421 RALEAVWTIISRTNKYIDETAPWVLAKAADSKEQLASVMAHLAASLRVVAHLIWPFMMTT 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  + + L +       +     L  G  +    +PIFPR 
Sbjct: 481 SAAMMEQLGLDATYHLEELDLADLPTGVTVVAKGEPIFPRL 521


>gi|19745562|ref|NP_606698.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|25009357|sp|Q8P298|SYM_STRP8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19747684|gb|AAL97197.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 665

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|306827914|ref|ZP_07461181.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429833|gb|EFM32875.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 666

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 311/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|94993743|ref|YP_601841.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94547251|gb|ABF37297.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Streptococcus pyogenes MGAS10750]
          Length = 666

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|254302880|ref|ZP_04970238.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323072|gb|EDK88322.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 636

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 209/513 (40%), Positives = 311/513 (60%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   L+I YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALEIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               +  ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCVSCETFFPENQLNGSNK---CPDCGKELTILKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + +N +     +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 239 FENNDEKFNKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL+
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++ +I +  A    DE I S+ + V++++ + M      RAL  +   +S
Sbjct: 359 NRTLGMYKKYFNDVIVSSSASEAIDEEIKSMFNEVIKDVEKYMYLFEFSRALETIWRFIS 418

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K     DR + V+ +  E + ++A L+  ++P  A KI + L + 
Sbjct: 419 RLNKYIDETMPWALAKDESKKDRLAAVMNILCEGLYKIAFLIAPYMPMSAQKISNQLGID 478

Query: 481 DENRC--FQSLDQR--LKPGFMLHKTFDPIFPR 509
            +     F  + +    K G  L +   PIFPR
Sbjct: 479 KDITDVKFDDVKEWNIFKEGHKLGEA-SPIFPR 510


>gi|167755124|ref|ZP_02427251.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402]
 gi|237733450|ref|ZP_04563931.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167705174|gb|EDS19753.1| hypothetical protein CLORAM_00628 [Clostridium ramosum DSM 1402]
 gi|229383485|gb|EEO33576.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 643

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 204/515 (39%), Positives = 313/515 (60%), Gaps = 9/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y++TAI Y + +PHIG+ YE+I+AD +ARF R +G +V F TGTDEHGQKI  
Sbjct: 1   MKNEKDYYLTTAITYTSGKPHIGNTYEIILADAIARFKRQEGYNVYFQTGTDEHGQKIEL 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+  K FVD+ +   + + D++D +YD F+RTT+  H    + ++KK+ D+GDIY
Sbjct: 61  KAKEAGIPPKQFVDEKAGEVKRIWDLMDTTYDRFMRTTDDYHKSQVQKIFKKLYDQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y    E+++ + ++  G            V   +EE YFF+LS Y D+L+ + 
Sbjct: 121 LGHYEGKYCTACESFFTESQLVDGK----CPDCGGEVHDAKEEAYFFKLSKYADRLIEHI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           E+HPEFI P+ R+NE+++   K GL+DL +SR +F W I +  DP++++YVWIDAL+NY+
Sbjct: 177 ETHPEFIQPVSRKNEMMNNFLKPGLQDLCVSRTSFTWSIPVDFDPKHVVYVWIDALSNYI 236

Query: 240 TTTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY  + +      K+WPADLH+IGKDI+RFH IYWP  L++ ++PLPK+VF H ++L
Sbjct: 237 TGLGYDVDGNHGELYQKYWPADLHLIGKDIVRFHTIYWPIMLMALDIPLPKQVFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNVI   ++++  GVDA+RY+++ EI    DG    D L +R+N+DLAN 
Sbjct: 297 QGESKMSKSKGNVIYADDLVDIFGVDAVRYYVLHEIPYDNDGSITWDLLVERINSDLANV 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV+R+++M  K + G++  P      D+ ++ +   + +++   M       AL  +
Sbjct: 357 LGNLVNRTIAMSNKYFGGIVNNPKVTEAVDDELIEIALAMPKKVIGKMDEFKSSDALDAI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L+   ++Y D   PW L K  T  DR +TVLY  +E IR  AI L  ++P  ANKI D
Sbjct: 417 FTLLRRTNKYIDETMPWALAKDETKRDRLATVLYNLIESIRFAAIALIPYMPSTANKILD 476

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +     +          K G  + +  + +F R 
Sbjct: 477 QINTDQRDLLALDTFGTYKEGTKVAEKPEMLFARL 511


>gi|87199956|ref|YP_497213.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135637|gb|ABD26379.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 521

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 241/512 (47%), Positives = 331/512 (64%), Gaps = 8/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I ADV+ARF R  G DV F TGTDEHG K+A+ A+ 
Sbjct: 3   EPFYITTAISYPNGKPHIGHAYEAIAADVIARFQRAMGRDVRFQTGTDEHGLKMAQKARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ S  F  M D L++SYD FIRTTE+RHH + + LW+++   GD+Y   Y
Sbjct: 63  LGITPRELSDEMSSYFIKMCDELNVSYDVFIRTTEERHHASTQELWRRMEANGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+  G  G+  + Q  PV W  EE +FFRLS Y + LL  YE +P
Sbjct: 123 EGWYSVRDEAFYDESELVAGEGGEKLSPQGTPVDWTVEESWFFRLSKYAEPLLKLYEENP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI P  RRNEV+ FV+ GL+DLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  G+
Sbjct: 183 GFIQPDSRRNEVMRFVEGGLRDLSVSRTSFDWGVKVPGCDGHVMYVWVDALTNYITGLGF 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + +G  AK+WPA+LH+IGKDI+RFH +YWPAFL+SA++ LP++VF HGF+L++G+K S
Sbjct: 243 -PDENGDFAKYWPANLHLIGKDIVRFHTVYWPAFLMSADIALPRQVFGHGFLLNRGQKES 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP+++ +  GVD LRYFL+RE+A G+DG Y  + +  R NA+LAN  GNLV R
Sbjct: 302 KSLGNVTDPLDLADRFGVDPLRYFLMREVAFGQDGSYSAEAIVTRCNAELANSYGNLVQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SMI K+  G + T  +    DE + +V +   +E+            +   +  V   
Sbjct: 362 TLSMIFKNMGGNLETFHSNVGDDELLATVFNACREELPREFSALNFSAGIEAWMRAVFAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D Q PW L+KT+P+R   VL      IR L + +   VP  A K+ D L +  E R
Sbjct: 422 NAYVDEQAPWALRKTDPERMKAVLLTLFIAIRDLTVAISPVVPAAAAKVLDQLGIPREAR 481

Query: 485 CFQSL------DQRLKPGFMLHKTFDPIFPRF 510
            F +L        R+  G  L +   P FPR 
Sbjct: 482 GFDALTDADWYMARVATGERLAQPM-PAFPRL 512


>gi|317495634|ref|ZP_07954001.1| methionyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914253|gb|EFV35732.1| methionyl-tRNA synthetase [Gemella moribillum M424]
          Length = 665

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 207/521 (39%), Positives = 312/521 (59%), Gaps = 13/521 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YP+   HIGHAY  +  D L R+ +L G D  F TGTDEHGQKI + A
Sbjct: 2   TKKTFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGFDTYFLTGTDEHGQKIQQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  GV+ + +VD   ++ + +   +DI Y  FIRTT+  H      +++++ +KGDIY G
Sbjct: 62  QEKGVSEQQYVDDMIKDIKKLWSAMDIDYSKFIRTTDGYHERAVAEIFERLVEKGDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y GWYS+ DE Y+ +    EV++  DG          N V+ + EE YFF++S Y D+L
Sbjct: 122 EYKGWYSISDEEYFTETQLQEVFRDEDGNMIGGIAPSGNEVKLVSEECYFFKMSKYADRL 181

Query: 177 LSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + YY+ HPEFILP  R+NE+++   K GL+DL+++R TFDWG+K+  +P++++YVWIDAL
Sbjct: 182 VKYYDEHPEFILPESRKNEMLNNFIKPGLEDLAVTRTTFDWGVKVKSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY+T  GY          K+WPAD+ V+GK+I+RFH IYWP  L++ +LPLPKK+F+HG
Sbjct: 242 VNYITALGYATGESEELFNKYWPADVQVVGKEIVRFHVIYWPILLMALDLPLPKKIFAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L K  K+SKS GNV+DP  +IE  G+DA RY+L+RE+  G+DG +  +    R+N+DL
Sbjct: 302 WLLMKDGKMSKSKGNVVDPYMLIERYGLDAARYYLLREVPFGQDGIFTPESFIDRINSDL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +N +GNL++R++SMI K  +G+IP      TE D  ++ +   V+ E    M+N    +A
Sbjct: 362 SNDLGNLLNRTISMINKYCNGVIPKFVEPTTEFDTELIELSKEVIDEYDGYMENMQFSKA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V   +S  ++Y D   PW L K          V+    E +R   IL+   +     
Sbjct: 422 LESVWKFISRTNKYIDQTTPWILAKDEASKGELDKVMNYLAESLRIATILISPALTNAPK 481

Query: 472 KIFDILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +I   L ++D+   F++            + +   PIFPRF
Sbjct: 482 EIKVQLGLSDDLLTFETAKTFGVFDGTTKVVEKPTPIFPRF 522


>gi|255102750|ref|ZP_05331727.1| methionyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308571|ref|ZP_05352742.1| methionyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 645

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 303/514 (58%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG
Sbjct: 62  IEQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    +G            ++EE YFFRLS Y+D  L     
Sbjct: 122 EYEGRYCTPCESFWTESQLL---EGNKCPDCGRETYLVKEESYFFRLSKYED-RLKELFK 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              F  P  R+NE++ +F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T 
Sbjct: 178 DDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +
Sbjct: 238 LGYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADD 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+M+ K  +G+IPT    T  D  +        +     M     H AL  V  LV
Sbjct: 358 ISRTVAMVEKYNNGIIPTAKVSTNFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLV 417

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K  T  D   TVLY   E IR +A L+   + + ANKI++ + +
Sbjct: 418 RRTNKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYEHIGI 477

Query: 480 A--DENRCFQSLDQRLKPGFML-HKTFDPIFPRF 510
              D+   ++S       G  +     +P+FPR 
Sbjct: 478 KGQDDITTWESTKTFGLIGENVKVFKGEPLFPRL 511


>gi|322388105|ref|ZP_08061711.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141126|gb|EFX36625.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 712

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 202/521 (38%), Positives = 309/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 48  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 106

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 107 KAEEAGITPQAYVDGMAVGVKDLWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 166

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 167 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 226

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 227 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 287 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 346

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 347 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 406

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D+++  V  + + +    M+     
Sbjct: 407 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDKALADVAEQSIADYNAYMEAVDYP 466

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 467 RALEAVWTLISRTNKYIDETAPWVLAKDEAHRDQLASVMSHLAASLRVVAHLIEPFMMET 526

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 527 SRAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 567


>gi|325695003|gb|EGD36907.1| methionine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 664

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 315/521 (60%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +V+  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGISPQAYVNGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVIYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYIGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSM+ K +DG IP      T+ D ++  V ++ + +   +M      
Sbjct: 360 ELANDLGNLLNRTVSMVNKYFDGQIPVYEENVTDFDGALAQVAAQSIADYYRHMDAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V  L+S  ++Y D   PW L K     ++ ++V+      +R +A +++ F+ + 
Sbjct: 420 RALEAVWMLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 480 SKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 520


>gi|67458627|ref|YP_246251.1| methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536907|sp|Q4UMX2|SYM_RICFE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|67004160|gb|AAY61086.1| Methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 512

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 250/513 (48%), Positives = 352/513 (68%), Gaps = 13/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNDVPHIGHAYTSVASDVIARFIRLCGFDVMFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F D  S +FR + +V++IS DDFIRTTE RH +   I W+K+ D G IY+G 
Sbjct: 62  NKNIDPQKFTDHTSESFRHLMNVMNISNDDFIRTTESRHKEAVAIFWQKLLDNGTIYEGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY++RDEA++++ E+              PV+W++E  YFF LS +QDKLL +YE++
Sbjct: 122 YEGWYAVRDEAFFDESELTSD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEAN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL +Y++  G
Sbjct: 178 PDFIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALASYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KI
Sbjct: 238 Y-PDKQSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLVTRINSELSNKIGNLLQ 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDE----SILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           R+ + + K+ DG +P        D+     IL   S+  ++    M+   I++ L  +I+
Sbjct: 357 RTTAFVYKNNDGKVPLLMQ-GIIDKIYELPILKTASKFAEQNILLMEKTEINKVLENIIN 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L  E + Y D++ PW LKKT+P++ S VLY  +EV+R +AI+LQ F+P  ANK+ D L V
Sbjct: 416 LSEEANIYIDSEAPWNLKKTDPEKMSEVLYTLLEVLRYIAIMLQPFIPSSANKMLDQLGV 475

Query: 480 ADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
             E R F+ L  D  L+ G  + +    IFPRF
Sbjct: 476 NKEERLFKHLIRDYALRAGSSILEPA-IIFPRF 507


>gi|139474323|ref|YP_001129039.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|73919759|sp|Q5XDK8|SYM_STRP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134272570|emb|CAM30836.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 665

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/518 (38%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 482 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|209558897|ref|YP_002285369.1| methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540098|gb|ACI60674.1| Methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 666

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 196/518 (37%), Positives = 309/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++   +FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERSDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|257452653|ref|ZP_05617952.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059192|ref|ZP_07923677.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684868|gb|EFS21703.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 640

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 212/512 (41%), Positives = 309/512 (60%), Gaps = 11/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++T I Y N  PH+G AY  I ADV++R+ +L G +V F TGTDEHGQK+ + A+  
Sbjct: 3   NFYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGNNVYFLTGTDEHGQKVEQTAKEK 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + + D+ +  F +M   L+I Y DFIRTTE+RH D+ + + K + +KGDIYKG Y 
Sbjct: 63  GFTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ ++++    +  +       +  ++EE YFFR+S YQD LL + E HP+
Sbjct: 123 GQYCISCETFFPENQIV---EPGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIEEHPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T TGY 
Sbjct: 180 FILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYE 239

Query: 246 DNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           ++ +     +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+S
Sbjct: 240 NDSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  RVN+DLAN +GNL++R
Sbjct: 300 KSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLGNLLNR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K + G I   G + E + S+  +    L ++ ++M      RAL  +   +S +
Sbjct: 360 TLGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWKFISRM 419

Query: 425 DRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R +TV+   VE + ++A+L+   +P+ A KI+  L V  +
Sbjct: 420 NKYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQLGVEKD 479

Query: 483 NR----CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +             +    L K   PIFPR 
Sbjct: 480 IQEARLSSLHTWNTFEEKHTLGKA-TPIFPRI 510


>gi|160947754|ref|ZP_02094921.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
 gi|158446888|gb|EDP23883.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
          Length = 649

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 207/509 (40%), Positives = 315/509 (61%), Gaps = 6/509 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  Y++T I YPN+  H+GH Y  I+ADVL ++ +  G DV FTTGTDEHGQK+ ++A
Sbjct: 2   EKKNFYLTTPIYYPNSNLHLGHTYTTIVADVLKKYKQAQGFDVFFTTGTDEHGQKLQESA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG     ++D    + +++   LDI +D F+R+T+K H      ++ K+ +KG+IYKG
Sbjct: 62  IKAGKAPLEYIDPIVESAKELWRTLDIDFDAFVRSTDKIHEKNVSEIFTKLYEKGEIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  EA++ + ++    +G         V   EEE YFFRLS YQD+LL  YE 
Sbjct: 122 SYKGMYCVPCEAFWTESQLV---EGNKCPDCGREVSPSEEETYFFRLSKYQDRLLKLYEE 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  R+NE+ISF+  GL DLS++R +FDWG+++P D ++++YVWIDAL+ YLT  
Sbjct: 179 NPDFIQPESRKNEMISFINEGLTDLSVTRSSFDWGVRVPFDEKHVVYVWIDALSCYLTGI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  + +    KFWP D+H+IGK+I+RFHAI WPA L++ +LPLPKK+F HG+IL   +K
Sbjct: 239 GYGTDEE-KFNKFWPCDVHLIGKEIMRFHAIIWPAILMALDLPLPKKIFGHGWILFDDDK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN++    +IE  G+DALRYF++RE   G+DG +    +  R+N+DL N +GNLV
Sbjct: 298 MSKSKGNIVYAEPIIERYGMDALRYFMLREFTFGQDGNFTYTKMLNRINSDLVNDLGNLV 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRSV+M  K +DG +P+    TE D  ++ + +     + E M       AL ++  LV 
Sbjct: 358 SRSVAMCEKYFDGFVPSQTELTELDNDLIEIATTTRDRVAELMDKLNFSMALEEIWKLVR 417

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y D   PW L K    +R  TV+Y  +E IR ++ L++ F+ + + +I + +  +D
Sbjct: 418 RTNKYIDETTPWTLIKEQKEERLKTVIYNLLESIRIISGLIKPFMKETSLRINEQIGYSD 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +    +    LK G  + K    +F R 
Sbjct: 478 YSYEDLTKFGLLKVGTKVCK-GKNLFDRL 505


>gi|103486745|ref|YP_616306.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976822|gb|ABF52973.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 234/518 (45%), Positives = 335/518 (64%), Gaps = 10/518 (1%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ++    YI+TAI+YPN +PHIGHAYE I  DV+ARF R  G +V   TGTDEHG K+ 
Sbjct: 1   MSQQSAPFYITTAISYPNGRPHIGHAYEAIATDVMARFQRARGRNVRLVTGTDEHGLKMF 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + A++ G  T    ++ S  FR+M   L+ISYD F+RT++  HH   + +WK +   GD+
Sbjct: 61  QTARDQGRATIDLANEMSGYFREMYAKLNISYDMFMRTSDPAHHAASQAIWKAMEANGDL 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y   Y GWYS+RDEA+Y++ E+  G +G   + Q  PV+W  EE +FFRLS YQD+LL+ 
Sbjct: 121 YLDRYEGWYSVRDEAFYDESELTDGGEGIRLSPQGTPVEWTVEESWFFRLSNYQDRLLAL 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y  +P+FI P  RRNEV+ FV+ GLKDLS+SR +FDWG+ +P  P ++MYVW+DALT YL
Sbjct: 181 YRDNPDFIRPESRRNEVLRFVEGGLKDLSVSRTSFDWGVPVPGSPGHVMYVWVDALTTYL 240

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY  +P      FWPA++H+IGKDI+RFH +YWPAFL+SANLPLP++VF HGF+L++
Sbjct: 241 SGLGY-PDPASDFGTFWPANIHMIGKDIVRFHTVYWPAFLMSANLPLPRQVFGHGFLLNR 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKSLGNV+DP+ + E  GVDALRY+L+RE++ G+DG Y  + + +  NADLAN  G
Sbjct: 300 GEKMSKSLGNVVDPMALAERFGVDALRYYLLREVSFGQDGSYSAEAIVRTANADLANSFG 359

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR-ENMQNQLIHRALAQVI 418
           NL  RS+SMI K+  G +       + D  +  + +   +++     +       + + +
Sbjct: 360 NLAQRSLSMIFKNLGGELSADYTPAQDDIDLFHLVNLSAKDLLPRAFEQLAFSVGIEEWL 419

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V   ++Y DAQ PW L+K++P+R   VL    + +R LAI ++  VP  A+ + D + 
Sbjct: 420 RAVFACNQYVDAQAPWALRKSDPERMRVVLMTLFQAVRTLAIAIRPVVPTAADNLLDQMG 479

Query: 479 VADENRCFQSLDQ-----RLKP-GFMLHKTFDPIFPRF 510
           +A + R F +L       RL   GF + +   PIFPR 
Sbjct: 480 IAPDARDFAALADADWFARLAASGFTVGQPV-PIFPRL 516


>gi|50913716|ref|YP_059688.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50902790|gb|AAT86505.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 666

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/518 (38%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|262283105|ref|ZP_06060872.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261357|gb|EEY80056.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 666

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 315/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P +R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 181 RLVEFFKSHPDFITPDDRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 241 ALLNYVTALGYGQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  +IE  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ D ++  V +  + +  + M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGQVPAYEENVTDFDGALAQVAAESIADYYKYMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     ++ ++V+      +R +A ++  F+ + 
Sbjct: 421 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHMIDPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLSQLDLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 521


>gi|306829685|ref|ZP_07462875.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428771|gb|EFM31861.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 679

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 314/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D  + +V    + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNELATVAELSIADYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A +++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHMIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A E    ++L+   L  G  +     PIFPR 
Sbjct: 494 SRAVLSQLGLA-EVSSLENLNLADLPSGVNVVAKGTPIFPRL 534


>gi|94987979|ref|YP_596080.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991861|ref|YP_599960.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94541487|gb|ABF31536.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545369|gb|ABF35416.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Streptococcus pyogenes MGAS2096]
          Length = 666

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/518 (38%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P +R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDDRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D+LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDSLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|126701164|ref|YP_001090061.1| methionyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252601|emb|CAJ70444.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Clostridium difficile]
          Length = 645

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 205/514 (39%), Positives = 303/514 (58%), Gaps = 10/514 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y++T I YP+   HIGH Y  + AD +ARF R  G DV F TGTDEHG+KI K A
Sbjct: 2   SKPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G++   ++D   ++ + + + +DISYDDFIRTTEKRH D  + ++ K+ ++GDIYKG
Sbjct: 62  IEQGMSEIEYLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ + ++    +G            ++EE YFFRLS Y+D  L     
Sbjct: 122 EYEGRYCTPCESFWTESQLL---EGNKCPDCGRETYLVKEESYFFRLSKYED-RLKELFK 177

Query: 183 HPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              F  P  R+NE++ +F+  GL+DLS++R TFDWGIK+P D ++++YVW+DAL NY+T 
Sbjct: 178 DDSFCFPAARKNEMVANFLDKGLEDLSVTRTTFDWGIKVPFDEKHVIYVWVDALCNYITA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY+ + D    K+WPA++ ++GK+I+RFH I WPA L++  L +PK+VF HG+IL   +
Sbjct: 238 LGYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGLEVPKQVFGHGWILFADD 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+ P  +IE  G+D L+YFL+RE A G+DG Y       R+N DLAN +GNL
Sbjct: 298 KMSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDLANDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+V+M+ K  +G+IPT    T+ D  +        +     M     H AL  V  LV
Sbjct: 358 ISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLV 417

Query: 422 SEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              ++Y D   PW L K    +    TVLY   E IR +A L+   + + ANKI++ + +
Sbjct: 418 RRTNKYIDETMPWALAKDETKKGELDTVLYNLCESIRIIATLINPIMNETANKIYEHIGI 477

Query: 480 A--DENRCFQSLDQRLKPGFML-HKTFDPIFPRF 510
              D+   ++S       G  +     +P+FPR 
Sbjct: 478 KGQDDITTWESTKTFGLIGENVKVFKGEPLFPRL 511


>gi|171780192|ref|ZP_02921096.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281540|gb|EDT46975.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 667

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/522 (37%), Positives = 304/522 (58%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + +  +LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +   FW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDNFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K + G +P      T  D  +  V    L E  + M     
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVPAYVKNVTAFDADLADVVEEKLAEYHKQMNAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V S++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F+  
Sbjct: 421 PRALDAVWSIISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +             G  +     PIFPR 
Sbjct: 481 TSNTIMEQLGLGSDFDLENLTLAGFPEGVKVVAKGTPIFPRL 522


>gi|237742263|ref|ZP_04572744.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429911|gb|EEO40123.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 636

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 205/514 (39%), Positives = 309/514 (60%), Gaps = 11/514 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ST I Y N  PH+G AY  I ADV+ R+++  G+D  F TG DEHGQK+ +AA+
Sbjct: 2   KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFMTGLDEHGQKVEQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T + + D+ + NF++M   LDI YDDFIRTTE RH    + +   ++ KGDIYKG 
Sbjct: 62  QNGYTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E ++ ++++               ++ ++EE YFF++S Y D LL + E H
Sbjct: 122 YEGKYCISCETFFPENQLNGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKHIEEH 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT+ G
Sbjct: 179 PDFILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAG 238

Query: 244 YLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           + ++       +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK
Sbjct: 239 FENDDKKFDKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P + I++ GVDA RY+L+RE   G DG Y    +  R+N+DLAN +GNL+
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKSIIGRLNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++ +I         D+ I ++   +++++ + M      RAL  +   +S
Sbjct: 359 NRTLGMYKKYFNSVIVASSTSEPIDDEIKTMFDDIIKDVEKYMYLFEFSRALETIWKFIS 418

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D   PW L K      R +TV+ +  E + ++A L+  ++P+ A KI + L + 
Sbjct: 419 RLNKYIDETMPWSLAKDEAKKGRLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGID 478

Query: 481 DE--NRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +  N  F  + +    K G  L +   PIFPR 
Sbjct: 479 KDITNVKFDDIKEWNIFKEGHKLGEA-SPIFPRI 511


>gi|125718503|ref|YP_001035636.1| methionyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498420|gb|ABN45086.1| Methionyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 666

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 198/522 (37%), Positives = 312/522 (59%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG+A   I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGNATTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVAVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY  +   +  KFW      H++ KDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNNGTVYHMVAKDILRFHSIYWPILLMMLDIKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+VSMI K +DG +PT     T+ D ++  V S  + +  ++M     
Sbjct: 361 YELANDLGNLLNRTVSMINKYFDGQVPTYEENVTDFDGALAQVASESIADYYKHMDAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +L+S  ++Y D   PW L K        + V+      +  +A +++ F+ +
Sbjct: 421 PRALEAVWTLISRTNKYIDETAPWVLAKDEAKVKELAAVMSHLAASLCVVAHMIEPFMME 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 TSKAVLSQLGLPQATSLENLAIDQLPAGLTVVEKGTPIFPRL 522


>gi|15608147|ref|NP_215523.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148660789|ref|YP_001282312.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|167968135|ref|ZP_02550412.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|306775143|ref|ZP_07413480.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001]
 gi|306971250|ref|ZP_07483911.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010]
 gi|307078978|ref|ZP_07488148.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011]
 gi|307083539|ref|ZP_07492652.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012]
 gi|3122902|sp|O05593|SYM_MYCTU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2052144|emb|CAB08142.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA
           ligase) [Mycobacterium tuberculosis H37Rv]
 gi|148504941|gb|ABQ72750.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|308216293|gb|EFO75692.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001]
 gi|308359184|gb|EFP48035.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010]
 gi|308363118|gb|EFP51969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011]
 gi|308366750|gb|EFP55601.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012]
          Length = 519

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 249/510 (48%), Positives = 351/510 (68%), Gaps = 5/510 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAIAYPNA PH+GHAYE I  D +ARF RLD  DV F TGTDEHG K+A+AA  
Sbjct: 2   KPYYVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDRYDVRFLTGTDEHGLKVAQAAAA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV T     +NS  F+ M + L+IS+D FIRTT+  HH+  + LW+++S  GDIY   Y
Sbjct: 62  AGVPTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+RDE ++ + E       +       PV W EE+ YFFRLSAY DKLL++Y ++P
Sbjct: 122 SGWYSVRDERFFVESETQLVDGTRLTVETGTPVTWTEEQTYFFRLSAYTDKLLAHYHANP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEVISFV  GL DLS+SR +FDWG+++P+ P ++MYVW+DALTNYLT  G+
Sbjct: 182 DFIAPETRRNEVISFVSGGLDDLSISRTSFDWGVQVPEHPDHVMYVWVDALTNYLTGAGF 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       ++WPADLH+IGKDI+RFHA+YWPAFL+SA + LP+++F+HGF+ ++GEK+S
Sbjct: 242 PDTDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAGIELPRRIFAHGFLHNRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GN++DP+ + E +GVD +RYFL+RE+  G+DG Y  + +  R+N DLAN +GNL  R
Sbjct: 302 KSVGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SM+ K+ DG +P PG F ++D ++L+    +L+ +R +   Q +H AL  +  ++ + 
Sbjct: 362 SLSMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLGDA 421

Query: 425 DRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++YF  Q+PW L+K+    +  R  T LYVT EV+R  A+L+Q  +P+ A KI D+L  A
Sbjct: 422 NKYFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLGQA 481

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              R F ++  RL PG  L      +FPR+
Sbjct: 482 PNQRSFAAVGVRLTPGTALP-PPTGVFPRY 510


>gi|257463198|ref|ZP_05627597.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060786|ref|ZP_07925271.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686462|gb|EFS23297.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 646

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 211/517 (40%), Positives = 314/517 (60%), Gaps = 16/517 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++T I Y N  PH+G AY  I +DV+AR+ +L G  V F TGTDEHGQK+ + A   
Sbjct: 3   NFYVTTPIYYVNGDPHVGSAYTTIASDVMARYQKLAGKTVYFLTGTDEHGQKVEQTAHEK 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + + D+ +  F +M   L+I Y DFIRTTE RH +  + + K + DKGDIYKG Y 
Sbjct: 63  GFTPQAWTDKMAPAFTEMWKALNIKYSDFIRTTEPRHKNAVKKILKAVYDKGDIYKGEYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ ++++    +  +       +  ++EE YFF++S YQ+ LL + E HP+
Sbjct: 123 GQYCISCETFFPENQIV---EPGHCPDCGKKLSTVKEESYFFKMSKYQEALLQHIEEHPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNYLT  GY 
Sbjct: 180 FILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYLTAVGYE 239

Query: 246 DNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           ++P+  +  +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+S
Sbjct: 240 NDPEKFETYWNHARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL++R
Sbjct: 300 KSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGIIGRINSDLANDLGNLLNR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K + G I + G   E +  +  +    L ++  +M      +AL  +   +S +
Sbjct: 360 TLGMYHKYFQGKIVSSGEIQEIEIDVYKLWEDTLSQVETHMYYYEYSKALEVIWKFISRM 419

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R +TV+   +E + ++A+L+  F+P+ A KI++ L ++++
Sbjct: 420 NKYIDETMPWALAKEETQQKRLATVMNTLLESLYKIAVLVSPFIPEAAQKIWNQLGISED 479

Query: 483 NRCFQ--------SLDQRLKP-GFMLHKTFDPIFPRF 510
               Q        S+ + + P G  L K  +PIFPR 
Sbjct: 480 IEKAQLQSLHCDVSVFESIFPIGHDLGKA-NPIFPRI 515


>gi|303255799|ref|ZP_07341840.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260254|ref|ZP_07346225.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303264128|ref|ZP_07350049.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|302597183|gb|EFL64288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302638578|gb|EFL69042.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302646533|gb|EFL76759.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 665

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + DE    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|303261460|ref|ZP_07347408.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303266261|ref|ZP_07352152.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268700|ref|ZP_07354490.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301801632|emb|CBW34330.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302637594|gb|EFL68081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302641760|gb|EFL72117.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644191|gb|EFL74447.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
          Length = 665

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + DE    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|257466511|ref|ZP_05630822.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917667|ref|ZP_07913907.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691542|gb|EFS28377.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 640

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 213/512 (41%), Positives = 309/512 (60%), Gaps = 11/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++T I Y N  PH+G AY  I ADV++R+ +L G +V F TGTDEHGQK+ + A+  
Sbjct: 3   NFYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGKNVYFLTGTDEHGQKVEQTAKEK 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + + D+ +  F +M   L+I Y DFIRTTE+RH D+ + + K + +KGDIYKG Y 
Sbjct: 63  GFTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ ++++ +         + + V   +EE YFFR+S YQD LL + E HP+
Sbjct: 123 GQYCISCETFFPENQIVEAGHCPDCGKKLSTV---KEESYFFRMSKYQDALLKHIEEHPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FILP  RRNEVISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T TGY 
Sbjct: 180 FILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYE 239

Query: 246 DNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           ++ +     +  A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+S
Sbjct: 240 NDSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P + I++ GVDA RY+L+RE   G DG Y   G+  RVN+DLAN +GNL++R
Sbjct: 300 KSKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLGNLLNR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K + G I   G + E + S+  +    L ++ ++M      RAL  +   +S +
Sbjct: 360 TLGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWKFISRM 419

Query: 425 DRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D   PW L K      R +TV+   VE + ++A+L+   +P+ A KI+  L V  +
Sbjct: 420 NKYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQLGVEKD 479

Query: 483 NR----CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +             +    L K   PIFPR 
Sbjct: 480 IQEARLSSLHTWNTFEEKHTLGKA-TPIFPRI 510


>gi|312864508|ref|ZP_07724739.1| methionine--tRNA ligase [Streptococcus downei F0415]
 gi|311099635|gb|EFQ57848.1| methionine--tRNA ligase [Streptococcus downei F0415]
          Length = 669

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 203/525 (38%), Positives = 316/525 (60%), Gaps = 16/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   Y++T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI +
Sbjct: 1   MSNK-TFYVTTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVRYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T + +VD  +++ +++ ++L+ISYD FIRTT+  H +    +++K+  +GDIY
Sbjct: 60  KAQEVGITPQEYVDGMAKDVKELWELLNISYDQFIRTTDDFHEEVVAKIFEKLLAQGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+   G          + V+ + EE YFFR+S Y D
Sbjct: 120 LGEYTGWYSVSDEEFFTESQLAEVYRDDHGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 179

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++YY+ HPEFI P  R NE++ +F++ GL+DL++SR T+ WGIK+P +P++++YVWID
Sbjct: 180 RLIAYYKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGIKVPSNPKHVIYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK 288
           AL NY+T  GY      +  KFW  D     +H+IGKDILRFH+IYWP  L++ +LPLP 
Sbjct: 240 ALMNYITALGYGQEDHANFDKFWHNDQDHEIIHMIGKDILRFHSIYWPIMLMALDLPLPT 299

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++ +HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    
Sbjct: 300 RLVAHGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVG 359

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQN 407
           R+N +LAN +GNL++R+V+MI K +DG IP+     TE D  + +V +  L +  + M  
Sbjct: 360 RINYELANDLGNLLNRTVAMINKYFDGEIPSYQENVTEFDADLAAVVADNLADYHKQMAA 419

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAF 465
               +AL  V ++++  ++Y D   PW L K    R   + V+      +R +A L+Q F
Sbjct: 420 VDFPKALDAVWNIIARTNKYIDETAPWVLAKDEAKRDQLADVMAHLAASLRLVAHLIQPF 479

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   ++ I   L +  +          L  G  +     PIFPR 
Sbjct: 480 MMSTSDAIMTQLGLGQDFDMANLSLAGLPSGIKVVSKGQPIFPRL 524


>gi|71902998|ref|YP_279801.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71802093|gb|AAX71446.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 666

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 196/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D     +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADFSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|326383789|ref|ZP_08205474.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197553|gb|EGD54742.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 523

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 256/507 (50%), Positives = 346/507 (68%), Gaps = 5/507 (0%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+TAIAYPN  PHIGHAYE I ADVLARF  LDG DV F +GTDEHGQK+ + A+  
Sbjct: 11  PFYITTAIAYPNGAPHIGHAYEFISADVLARFKALDGFDVRFQSGTDEHGQKMQQTAEKE 70

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+T      NS  F  +   L      FIRTT+  HH     +WK++   GDIY   Y+
Sbjct: 71  GVSTAELAKTNSDRFEALHMALGTDLSRFIRTTDTDHHRASEEIWKRMEAAGDIYLDSYA 130

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHP 184
           GWY +RDEA++ +DE    ADG+    ++  V  W EE+ YFFRLS YQD+LL+ Y+ HP
Sbjct: 131 GWYDVRDEAFFTEDETTVDADGRRVATENGHVLTWTEEQTYFFRLSNYQDRLLALYDEHP 190

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EFI P  RRNEV SFV  GL DLS+SR TFDWG+K+P  P ++MYVW+DALTNYLT  G+
Sbjct: 191 EFIGPDVRRNEVRSFVAGGLNDLSISRTTFDWGVKVPGAPDHVMYVWVDALTNYLTGVGF 250

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+     +++WPADLH+IGKDI+RFH +YWPAFL+SA L +P++VF+HGF+ ++GEK+S
Sbjct: 251 PDDEQTL-SRYWPADLHIIGKDIIRFHCVYWPAFLMSAGLEVPRRVFAHGFLFNRGEKMS 309

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP E++E+ G+DA+RYF +RE++ G+DG Y  D +  R NADLAN  GNL  R
Sbjct: 310 KSIGNVVDPHELVEQFGLDAVRYFFLREVSYGQDGSYSADAIVARNNADLANEYGNLAQR 369

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SMI K ++  +P PG FT++D ++L     +L ++RE    Q IH  L  V +++++ 
Sbjct: 370 TLSMIGKYFESRVPQPGEFTDADRALLDAADALLPKVREQFDKQSIHLGLEAVWTVLADA 429

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA--DE 482
           +RY  AQ+PW+L KT+ DR  TVLYV  EV+R + +L+Q  +P+    + D+L V   DE
Sbjct: 430 NRYVSAQEPWKLAKTDLDRTGTVLYVCAEVVRIVTVLVQPVMPQSTATLLDLLAVPSGDE 489

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           NR F ++  RL  G  L K   P+FPR
Sbjct: 490 NRQFTAVVDRLAVGAELPKP-TPVFPR 515


>gi|326201023|ref|ZP_08190895.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988591|gb|EGD49415.1| methionyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 654

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 195/513 (38%), Positives = 307/513 (59%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++TAIAY +++PHIG+ +E+++AD  ARF R+ G DV F TGTDEHGQKI   A
Sbjct: 2   SKKPYYLTTAIAYTSSKPHIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G++ K +VD  +   + + D+++ +YD FIRTT++ H    + ++KK+ ++GDIYKG
Sbjct: 62  KEVGISPKEYVDNFAVEIKRICDLMNTTYDKFIRTTDEYHEKQVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++   ++  G                +EE YF +LS Y D+L+ +   
Sbjct: 122 HYEGMYCTPCEAFFTPSQLVDGK----CPDCGRECHPAKEEAYFLKLSKYADRLIQHINE 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DAL+NY+T 
Sbjct: 178 HPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALSNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+  + +      K+WPAD+H+IGKDILRFH IYWP  L++  +PLPK+VF H ++L  
Sbjct: 238 LGFDVDGNNDEKFNKYWPADMHLIGKDILRFHTIYWPIMLMAMEVPLPKQVFGHPWLLMG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RY+++ E+    DG    + + +R+N+DLAN +G
Sbjct: 298 NGKMSKSKGNVIYADELVDIFGVDAVRYYVLHEMPFDNDGVISWELITERINSDLANVLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R ++M  K + G++       E D  ++ +  +  + + E M    +  AL+++ S
Sbjct: 358 NLVNRVIAMSNKYFSGVVNNSNVREEIDNELIELTLKTPETVVEKMDKLRVADALSEIFS 417

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K      R  TVLY  VE I   A LL+AF+P+ A KI   L
Sbjct: 418 LFKRCNKYIDETMPWILAKDEDKKPRLETVLYNLVESIVTGASLLEAFMPETAQKIVAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +  +     +  + K G  + +T + +F R 
Sbjct: 478 NTSIRSLEDMKVYGQYKSGAKVTETPEILFLRL 510


>gi|71910158|ref|YP_281708.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|25009390|sp|Q9A178|SYM_STRP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71852940|gb|AAZ50963.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 665

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 309/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 182 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 242 NYATALGYRQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 422 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRLVAHVIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +   +               +     PIFPR 
Sbjct: 482 IMAQLGLEPVSDLSTLALADFPANTKVVAKGTPIFPRL 519


>gi|94989852|ref|YP_597952.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94543360|gb|ABF33408.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 666

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 196/518 (37%), Positives = 308/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+  + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY   
Sbjct: 63  EAGIKPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLDE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|15674551|ref|NP_268725.1| methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|13621657|gb|AAK33446.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 666

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 309/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+T + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGITPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYDDRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYRQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRLVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +   +               +     PIFPR 
Sbjct: 483 IMAQLGLEPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|182683707|ref|YP_001835454.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
 gi|182629041|gb|ACB89989.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
          Length = 679

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAEVAEQSIADYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + DE    ++L          +     PIFPR 
Sbjct: 494 SRAVLTQLGL-DEVASLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|228477862|ref|ZP_04062476.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250352|gb|EEK09592.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 667

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 204/521 (39%), Positives = 313/521 (60%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ ++GDIY G Y
Sbjct: 63  AGITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FFKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  +  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFGGQVPAYVENVTDFDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLIQPFMMTT 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L ++                  +     PIFPR 
Sbjct: 483 SNAIMEQLGLSGAFDLENLELSAFPENVTVVSKGTPIFPRL 523


>gi|85374072|ref|YP_458134.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787155|gb|ABC63337.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 519

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 239/512 (46%), Positives = 326/512 (63%), Gaps = 9/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I ADV+ARF R  GLDV F TGTDEHG K+A+ A+ 
Sbjct: 3   EPFYITTAISYPNGRPHIGHAYEAIAADVIARFQRQRGLDVRFQTGTDEHGLKMARKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +   D+ S  F+ M D L++S D FIRT +  HH   + +W+ +   GD+Y   Y
Sbjct: 63  QGKSPRDLADEMSGYFKAMCDALNVSCDRFIRTVDDDHHRASQAIWRAMEAAGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEAYY++ E+  G   +  + Q  PV+W  EE +FFRLS Y+DKLL   ES P
Sbjct: 123 EGWYSVRDEAYYDESELVDGEGDEKLSPQGTPVEWTVEESWFFRLSKYEDKLLKLLES-P 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  RRNE+++FVK GL+DLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  GY
Sbjct: 182 GFLEPASRRNEMVAFVKQGLRDLSVSRTSFDWGVKVPGSEDHVMYVWVDALTNYITGLGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+ +    K WPADLH+IGKDI+RFH IYWPAFL+SA LP+PK+VF HGF+L  G K S
Sbjct: 242 PDDTE-LWRKHWPADLHLIGKDIVRFHTIYWPAFLMSAGLPVPKQVFGHGFVLKDGRKES 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV DP ++ +  GVDALRYFL+RE++ G DG +  + +  RVNA+LAN  GNL  R
Sbjct: 301 KSLGNVTDPHDLADFYGVDALRYFLMREVSFGSDGNWSHEAIVTRVNAELANSFGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++SMI K+ DG +    A  E    + +V +   + +    +       + + I  V   
Sbjct: 361 TLSMIHKNMDGSLEKFEARGEDKALLQTVLTACRESLPREFEKLAFSVGIDEWIKAVYAC 420

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++Y D Q PW L+KT+P+R   VL   +  I  LAI +Q  +P+ A  + D L V  + R
Sbjct: 421 NQYVDEQAPWALRKTDPERMKAVLQTLLMAIHDLAIAIQPVIPEKAGALLDDLGVPTDRR 480

Query: 485 CFQSL------DQRLKPGFMLHKTFDPIFPRF 510
            +  +      +Q +  GF + K   P FPR 
Sbjct: 481 TYDHISGEGWFNQLVAEGFTVPKP-TPAFPRL 511


>gi|157363213|ref|YP_001469980.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157313817|gb|ABV32916.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 624

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 216/506 (42%), Positives = 321/506 (63%), Gaps = 7/506 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N+ PH+G AY  IIAD++AR+ R+ G DV F TGTDEHGQKI +A+ + 
Sbjct: 2   KFYITTPIYYVNSDPHVGSAYTTIIADIIARYKRMMGYDVFFLTGTDEHGQKILQASSSL 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + F D+ +  F+ +   L+I+ D FIRTT+  H    +   KK+ +  DIYKG Y 
Sbjct: 62  GKDPQSFCDELADRFKQLWKKLNITNDGFIRTTDPNHMKVVQYFVKKMVENNDIYKGEYR 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y+N+DE+          +    ++++ E+ YFFRLS YQDKLL YYE HPE
Sbjct: 122 GWYCVPCETYWNEDEIGSDK---LCPSCGRELKYVSEQNYFFRLSRYQDKLLRYYEEHPE 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  RRNE++  ++ GLKDLS++R TF WG+ +PDDP++++YVW+DAL NY++  GY 
Sbjct: 179 FVQPDFRRNEMMRILEGGLKDLSITRTTFKWGVPMPDDPEHVIYVWVDALINYISAIGYP 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           ++   +  K+WPADLH+IGK+I RFH+I WPA L+SA L LP+ VF+HG++   G+KISK
Sbjct: 239 EDLK-TFEKYWPADLHLIGKEINRFHSIIWPAMLMSAGLELPRTVFAHGWLTVDGQKISK 297

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDP   +EE G D LR++LVR+I  GKDG + +  L  R+N+DLAN  GNL+ R+
Sbjct: 298 SLGNAIDPKYFVEEYGNDVLRFYLVRDINFGKDGDFSEKNLVNRLNSDLANDYGNLLHRT 357

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI K Y   +P PGA  + DE       +  +E ++ M    + +A+ +V+  ++  +
Sbjct: 358 LAMIKKYYSSTMPRPGAHEQIDEKFKHDILQCCKEYQQFMDQYSLTQAVEKVMEALAISN 417

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +YFD +KPW L K    D+ STVL+   E + ++A +    +P  + ++F  L    ++ 
Sbjct: 418 KYFDERKPWVLAKQKDFDKLSTVLFNVCESLLKVATMFSPIMPDSSEEVFSRLGFDQKSS 477

Query: 485 CF-QSLDQRLKPGFMLHKTFDPIFPR 509
            +       LKPG  +    +P+F +
Sbjct: 478 KYMLETWNILKPGKKIVHA-EPLFAK 502


>gi|307704594|ref|ZP_07641498.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
 gi|307621851|gb|EFO00884.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
          Length = 665

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/521 (38%), Positives = 308/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  +IE  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +    M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAEVAEQSIADYHTYMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +++              G  +     PIFPR 
Sbjct: 480 SRAVLTQLGLSEVASLENLSLVDFPAGVTVVAKGTPIFPRL 520


>gi|306825043|ref|ZP_07458385.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432479|gb|EFM35453.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 679

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 200/521 (38%), Positives = 308/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV   TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFCLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAAGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGIVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 254 ALLNYATALGYGQDDHTNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGKVPAYVEGVTEFDNALAQVAEQSISDYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +  +A L++ F+   
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLHIVAHLIEPFMMGT 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +            G  +     PIFPR 
Sbjct: 494 SQAVLTQLGLAEVSSLENLSLADFPAGVTVVAKGTPIFPRL 534


>gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 666

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 195/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A 
Sbjct: 3   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ +D+  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGISPQTYVDNMAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL 
Sbjct: 183 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 243 NYATALGYGQMDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  + M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLADYHKYMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A   +V+      +R +A L+Q F+ + +  
Sbjct: 423 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +   +               +     PIFPR 
Sbjct: 483 IMTQLGLEPVSDLSVLALADFPDNTKVVAKGTPIFPRL 520


>gi|253753801|ref|YP_003026942.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|251820047|emb|CAR46270.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292558559|gb|ADE31560.1| Methionyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
          Length = 667

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/519 (38%), Positives = 312/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A
Sbjct: 2   TKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G
Sbjct: 62  KEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL
Sbjct: 122 EYSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKL 181

Query: 177 LSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL
Sbjct: 182 VEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG
Sbjct: 242 LNYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 302 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RA
Sbjct: 362 ANDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +N
Sbjct: 422 LEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +             L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 520


>gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 665

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 195/518 (37%), Positives = 312/518 (60%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A 
Sbjct: 2   KKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ +D+  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGISPQTYVDNMAKDVKDLWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL 
Sbjct: 182 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 242 NYATALGYGQMDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D+LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDSLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  + M++    RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLVDYHKYMESVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A   +V+      +R +A L+Q F+ + +  
Sbjct: 422 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +   +               +     PIFPR 
Sbjct: 482 IMAQLGLEPVSDLSTLTLAAFPANTKVIAKGTPIFPRL 519


>gi|253755323|ref|YP_003028463.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817787|emb|CAZ55539.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 667

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/519 (38%), Positives = 312/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A
Sbjct: 2   TKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G
Sbjct: 62  KEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL
Sbjct: 122 EYSGWYSVSDEEFFTESQLEEVFRDENGKVTSGIAPSGHEVAWVSEESYFLRLSKYQDKL 181

Query: 177 LSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL
Sbjct: 182 VEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG
Sbjct: 242 LNYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 302 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RA
Sbjct: 362 ANDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +N
Sbjct: 422 LEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +             L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 520


>gi|146321108|ref|YP_001200819.1| methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751976|ref|YP_003025117.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
 gi|145691914|gb|ABP92419.1| Methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816265|emb|CAZ51893.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
          Length = 667

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/519 (38%), Positives = 312/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A
Sbjct: 2   TKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G
Sbjct: 62  KEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL
Sbjct: 122 EYSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKL 181

Query: 177 LSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL
Sbjct: 182 VEFFNAHPDFIQPAGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG
Sbjct: 242 LNYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 302 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVDRINYEL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RA
Sbjct: 362 ANDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +N
Sbjct: 422 LEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +             L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 520


>gi|313891268|ref|ZP_07824886.1| methionine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120335|gb|EFR43456.1| methionine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 668

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 201/522 (38%), Positives = 312/522 (59%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ RL   +V + TG DEHGQKI  
Sbjct: 1   MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMNHEVFYLTGLDEHGQKIQT 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + +  +LDISYD FIRTT+  H +    +++K+  + DIY
Sbjct: 61  KAEEAGITPQTYVDGMASDVKKLWALLDISYDKFIRTTDTYHEEVVAQVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV+   +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFHDENGKVIGGTAPSGHKVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL++Y+ +P+FI P  R NE++ +F++ GL+DL++SR TF WG+K+P +P++++YVWID
Sbjct: 181 RLLAFYKENPQFIQPNGRLNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+   + LP+++ 
Sbjct: 241 ALLNYATALGYGQKDSHNFEKFWNQGRVFHMVGKDILRFHSIYWPILLMMLEMKLPERLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGMFTPEDYIGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+++MI K +DG IP   A  T  D  + +V +  + E    M+    
Sbjct: 361 YELANDLGNLLNRTIAMINKYFDGQIPDYQAGVTHFDADLEAVVAAQIAEYHVQMEAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +++S  ++Y D   PW L K +   +  ++V+      +R +A LLQ F+ +
Sbjct: 421 PRALEAVWTIISRANKYIDETAPWLLAKEDGNKEDLASVMAHLAASLRVVAHLLQPFMME 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I   L +             + P   +     PIFPR 
Sbjct: 481 TSNAIMTQLGLEAVADLENLSLAGIPPQTTVISKGQPIFPRL 522


>gi|324991378|gb|EGC23311.1| methionine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 665

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 313/521 (60%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MTEKQSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG++ + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 61  KAEEAGISPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 181 RLVEFFKSHPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 241 ALLNYATALGYGQDDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPDRLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG +P      T+ DE +       ++     M      
Sbjct: 361 ELANDLGNLLNRTVSMINKYFDGRVPDYEENVTDFDEDLQDCAKESIRMYHSYMNGVNYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +AL ++ +L+S  ++Y D   PW L K     ++ ++V+      +R +A L++ F+ + 
Sbjct: 421 KALEEIWTLISRTNKYIDETTPWILAKDEALRNQLASVMSHLAASLRVVAHLIKPFMMET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +            +L  G  + +   PIFPR 
Sbjct: 481 SKAVLGQLGLPQAASLENLAIDQLPAGMTVVEKGTPIFPRL 521


>gi|56807711|ref|ZP_00365584.1| COG0143: Methionyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 666

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 195/518 (37%), Positives = 308/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A+
Sbjct: 3   KKPFTITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ + +  +LDISYD FIRTT+  H +    +++K+  + DIY G 
Sbjct: 63  EAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 122

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +    EV++  DGQ         + V+W+ EE YF RLS Y D+L+
Sbjct: 123 YSGWYSVSDEEFFTESQLKEVFRDEDGQVIGGIAPSGHEVEWVSEESYFLRLSKYADRLV 182

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++   +FI P  R NE++ +F++ GL+DL++SR TF WG+ +P DP++++YVWIDAL 
Sbjct: 183 AFFKERSDFIQPDGRMNEMVKNFIEPGLEDLAVSRTTFTWGVPVPSDPKHVVYVWIDALL 242

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P ++ +HG+
Sbjct: 243 NYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPDRLIAHGW 302

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 303 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 362

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  ++M+     RAL
Sbjct: 363 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             V ++++  ++Y D   PW L K + D+A   +V+      +R +A ++Q F+ + +  
Sbjct: 423 EAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHVIQPFMMETSAA 482

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +A  +               +     PIFPR 
Sbjct: 483 IMAQLGLAPVSDLSTLALADFPANTKVVAKGTPIFPRL 520


>gi|289167689|ref|YP_003445958.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907256|emb|CBJ22091.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 665

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 200/522 (38%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D ++  V +  + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNALAQVAAESIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVASLENLKLADFPADVTVVAKGTPIFPRL 520


>gi|291460472|ref|ZP_06599862.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416844|gb|EFE90563.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 673

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 209/520 (40%), Positives = 307/520 (59%), Gaps = 19/520 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI + A
Sbjct: 2   EKKAYYITTAIAYASGKPHIGNTYEIVLADAIARFKRFEGYDVFFQTGTDEHGQKIEQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+    +VD      R + D+++ SYD F+RTT+  H    + +++K+ +KGDIYKG
Sbjct: 62  REAGMEPGQYVDGVVGEIRAIWDLMNTSYDKFMRTTDPYHEKQVQKMFRKMYEKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++ D ++  G           PV+   E  YFFR+S Y D+L+ + E 
Sbjct: 122 VYEGWYCTPCESFWTDSQLVDGK----CPDCGRPVERASESSYFFRMSKYADRLMKHIEE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++   K GL+DLS+SR  F WGI +  DP+ ++YVW+DALTNY+T 
Sbjct: 178 HPEFIQPVSRKNEMVNNFLKPGLQDLSVSRTVFKWGIPVDFDPENVIYVWLDALTNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-- 297
            GY  + + S    ++WPADLH+IGKDI+RFH +YWP FL+S  LPLPK+VF H ++L  
Sbjct: 238 LGYDVDGNSSERFHRYWPADLHLIGKDIIRFHTLYWPIFLMSLELPLPKQVFGHPWLLTA 297

Query: 298 ----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKS GNVI   E++   GVDA+R+F++ E+    DG    + + +R N  
Sbjct: 298 AGKSEEGVKMSKSRGNVIYADELVRLFGVDAVRFFVIHEMPFENDGVISWELMAERYNGM 357

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNLV RS++M  K + G++   GA    DE +     + ++ I   M    I  A
Sbjct: 358 LANILGNLVKRSIAMSNKYFGGIVRDSGAAEPVDEDLKETVLKNVRAIVAKMDELRIADA 417

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  +    ++Y D  +PW L K      R  TVLY   E I   A +L++F+P+ A 
Sbjct: 418 LDLLFDIFRRSNKYIDETEPWLLAKEEGKSARLETVLYNLTEAIVIGASVLESFMPRTAE 477

Query: 472 KIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPR 509
           +I   L    E R  + +D       G  +      +F R
Sbjct: 478 EILRQLNT--EARPLEQMDRFGLYPSGTRVTGDPKTLFER 515


>gi|306831942|ref|ZP_07465097.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425868|gb|EFM28985.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 667

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 197/522 (37%), Positives = 306/522 (58%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   +V + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++L+ISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHTHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K + G +P      T  D  +  V    L E  + M     
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVPAYVENVTAFDADLAGVVEEKLAEYHKQMNAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V S++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F+  
Sbjct: 421 PRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +             G  +     PIFPR 
Sbjct: 481 TSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRL 522


>gi|288905923|ref|YP_003431145.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978889|ref|YP_004288605.1| methionyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732649|emb|CBI14221.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178817|emb|CBZ48861.1| Methionyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 667

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 197/522 (37%), Positives = 306/522 (58%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   +V + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++L+ISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ +HP+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K + G +P      T  D  +  V    L E  + M     
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVPAYVENVTAFDADLAGVVEEKLAEYHKQMNAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V S++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F+  
Sbjct: 421 PRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +             G  +     PIFPR 
Sbjct: 481 TSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRL 522


>gi|331002319|ref|ZP_08325837.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410135|gb|EGG89569.1| hypothetical protein HMPREF0491_00699 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 654

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 205/518 (39%), Positives = 307/518 (59%), Gaps = 14/518 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+TAIAY + +PHIG+ YE+++AD +ARF R +G +V F TGTDEHGQKI   A
Sbjct: 2   SKKPYYITTAIAYASGKPHIGNTYEIVLADAIARFRREEGHEVFFQTGTDEHGQKIENKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T K +VD  +   R + D+++ SYD FIRTT+  H    + ++KK  D+GDIYKG
Sbjct: 62  KEAGITPKEYVDNAAGQIRKIWDMMNTSYDKFIRTTDDDHKKQVQKIFKKFYDQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    E+++ D ++  G         H  V   +E+ YFF++S Y D+L+ +   
Sbjct: 122 FYEGMYCTACESFFTDSQLVDGK----CPDCHGDVYPAKEDAYFFKMSKYADRLIKHINE 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  DP+++ YVW+DAL+NY+T 
Sbjct: 178 HPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFTWGIPVDFDPKHVTYVWLDALSNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY  + + S    K WPADLH+IGKDI+RFH IYWP FL++ +LPLPK+VF H ++L  
Sbjct: 238 IGYDVDGESSERFKKLWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+    +++  GVDA+RYF++ E+    DG    D + +R N+DLAN +G
Sbjct: 298 DGKMSKSKGNVLYADTLVDFFGVDAVRYFVLHEMPFDNDGVISWDLMVERFNSDLANVLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           NLVSR++SM  K +DG++           TE D  +  V    +++  + M    +  A+
Sbjct: 358 NLVSRTISMSNKYFDGVLTDTKDESVAGATEIDTDLKDVVLMSVEKAVKKMSELRVADAI 417

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++ +L    ++Y D   PW L K      R  TVLY   E I   A LL +F+P+ + K
Sbjct: 418 TEIWTLFKRCNKYIDETTPWILAKEEDKKSRLQTVLYNLAESIAIGASLLYSFMPETSGK 477

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I +       +    +    L  G  + +  D +F R 
Sbjct: 478 ILESFGTNKRSLEDMNKFGLLMSGTKVVEESDILFKRL 515


>gi|319758341|gb|ADV70283.1| methionyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 667

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/519 (38%), Positives = 312/519 (60%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A
Sbjct: 2   TKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G
Sbjct: 62  KEAGLTPQAYVDGMAVGVQELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL
Sbjct: 122 EYSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKL 181

Query: 177 LSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL
Sbjct: 182 VEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG
Sbjct: 242 LNYATALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 302 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RA
Sbjct: 362 ANDLGNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +N
Sbjct: 422 LEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +             L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 520


>gi|238917941|ref|YP_002931458.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873301|gb|ACR73011.1| methionyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 657

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 207/520 (39%), Positives = 319/520 (61%), Gaps = 15/520 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   Y++TAIAY + +PHIG+ YE+++AD +ARF R +G DV F TGTDEHGQKI   
Sbjct: 3   QSKGPFYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+T K FVD  S   + + D+++ SYD FIRTT+  H    + ++KK+ D+GDIYK
Sbjct: 63  AEEAGITPKEFVDNVSTEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G Y    E+++ + ++  G            V+  +EE YFF++S Y +KL+ +  
Sbjct: 123 GSYEGMYCTPCESFWTESQLVDGK----CPDCGREVKPAKEEAYFFKMSKYANKLIEHIN 178

Query: 182 SHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +HPEFI P+ R+NE+++     GL+DL +SR +F WGI +  D ++++YVW+DALTNY+T
Sbjct: 179 THPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYIT 238

Query: 241 TTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY  + + S+   KFWPADLH+IGKDI+RFH IYWP FL++   PLPK+VF H ++L 
Sbjct: 239 GIGYDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQ 298

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI   ++++  GVDA+RYF++ E+    DG    + + +R+N+DLAN +
Sbjct: 299 NDGKMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTL 358

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNLV+R+++M  K + G++   G    + D  + +V +    +++  M    +  A+ +V
Sbjct: 359 GNLVNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRDKVQAKMATLHVADAITEV 418

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +L    ++Y D   PW L K     DR + VLY  VE I   A LL++F+P+  +KI  
Sbjct: 419 FTLFKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILA 478

Query: 476 ILFVADEN---RCFQSLDQRL--KPGFMLHKTFDPIFPRF 510
            L+ A+     R F  L      + G  + +T + +F R 
Sbjct: 479 QLYPANPEAGVRDFDDLATFGLRETGLKVTETPEILFARL 518


>gi|307708494|ref|ZP_07644959.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615410|gb|EFN94618.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 665

 Score =  433 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVW D
Sbjct: 180 RLVEFFKSHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 240 ALLNYVTALGYDQDEHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  +IE  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLIERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAQVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A E    ++L+         +     PIFPR 
Sbjct: 480 SRAVLTQLGLA-EVASLENLNLADFPADVTVVAKGTPIFPRL 520


>gi|149184557|ref|ZP_01862875.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831877|gb|EDL50310.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 519

 Score =  433 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 242/512 (47%), Positives = 328/512 (64%), Gaps = 9/512 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN +PHIGHAYE + ADV+ARF RL G DV F TGTDEHG K+A+ A++
Sbjct: 3   DPYYITTAIHYPNGKPHIGHAYETVAADVIARFQRLMGRDVRFQTGTDEHGLKMAQKARD 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D+ S  F+D+ D LDI+YD FIRTT++ HH   R +W+ +  K D+Y   Y
Sbjct: 63  LGKTPRELADEMSGAFKDLFDRLDITYDRFIRTTDEDHHKASRAIWEAMEAKSDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEAYY++ E+ +G  G+  + Q  PV+W EEE +FFRLS Y + LL    + P
Sbjct: 123 EGWYSVRDEAYYDEKELVEGEGGEMLSPQGTPVEWTEEETWFFRLSKYAEPLLELLNT-P 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  RRNE+I+FV+ GLKDLS+SR +FDWG+K+P    ++MYVW+DALTNY+T  GY
Sbjct: 182 GFLEPASRRNEMIAFVEGGLKDLSVSRTSFDWGVKVPGADNHVMYVWVDALTNYITGVGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  +    K+WPA LH+IGKDI+RFH +YWPAFL+SAN+PLPK+VF HGF+L++G K S
Sbjct: 242 PDGGEMWD-KYWPASLHLIGKDIVRFHTVYWPAFLMSANIPLPKQVFGHGFLLNRGVKES 300

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV DPIE+I+  GVD+LRYFL+ E+  GKDG Y  + L  +VNA+LAN  GNL  R
Sbjct: 301 KSAGNVTDPIELIDLFGVDSLRYFLMAEVVFGKDGSYSAEALVNKVNAELANSFGNLAQR 360

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR-ENMQNQLIHRALAQVISLVSE 423
           ++SMI K+ DG + T     + D+++L+      +E      +       +   +  V  
Sbjct: 361 TLSMIHKNMDGKLETFETNGD-DKTLLATVQEACRETLPREFEALNFSVGIEAWLKAVFA 419

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            + Y D Q PW LKK++P+R   VL   +  IR LAI +Q  VP  A  + D L V  + 
Sbjct: 420 CNAYVDEQAPWGLKKSDPERMKAVLQTLLLAIRDLAIAIQPVVPTKAAAVLDQLGVTPDR 479

Query: 484 RCFQSL-----DQRLKPGFMLHKTFDPIFPRF 510
           R +  L        L     + +   P FPR 
Sbjct: 480 RSYADLSDEGWFGSLVAAGHVVEKPTPAFPRL 511


>gi|331266178|ref|YP_004325808.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682850|emb|CBZ00467.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 665

 Score =  433 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 307/521 (58%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQ+
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQN 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQEDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNALAQVAEQSISDYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A +++ F+   
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHMIEPFMMGT 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +               +     PIFPR 
Sbjct: 480 SRAVLAQLGLAEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|168488458|ref|ZP_02712657.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183573094|gb|EDT93622.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332073087|gb|EGI83566.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 665

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T +V+VD+ +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
            L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 CLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|307706348|ref|ZP_07643160.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618266|gb|EFN97421.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 665

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 203/522 (38%), Positives = 315/522 (60%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +
Sbjct: 240 ALLNYATALGYGQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHALAEVAEQSIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     ++ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRNQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  + + L +A E    ++L+         +     PIFPR 
Sbjct: 480 SRAVLNQLGLA-EVSSLENLNLADFPADVTVVAKGTPIFPRL 520


>gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 665

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 194/518 (37%), Positives = 310/518 (59%), Gaps = 11/518 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI   A 
Sbjct: 2   KKTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYEVFYLTGLDEHGQKIQTKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG++ + +VD  +++ +D+  +LDISY+ FIRTT+  H +    +++K+  + DIY G 
Sbjct: 62  EAGISPQTYVDNMAKDVKDLWQLLDISYNKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGE 121

Query: 124 YSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           YSGWYS+ DE ++ +   +EV++  DG+         + V+W+ EE YF RLS Y D+L+
Sbjct: 122 YSGWYSVSDEEFFTESQLEEVFRDEDGKVIGGIAPSGHQVEWVSEESYFLRLSKYADRLV 181

Query: 178 SYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++++  P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL 
Sbjct: 182 AFFKEQPDFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALL 241

Query: 237 NYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  +LP+P+++ +HG+
Sbjct: 242 NYTTALGYGQTDHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDLPMPERLIAHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LA
Sbjct: 302 FVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG +P      T  D  +  +    L +  + M+     RAL
Sbjct: 362 NDLGNLLNRTVAMINKYFDGTVPAYVDNGTAFDTELSQLIDAQLADYHKYMEAVDYPRAL 421

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANK 472
             + ++++  ++Y D   PW L K + D+A   +V+      +R +A L+Q F+ + +  
Sbjct: 422 EAIWTIIARTNKYIDETAPWVLAKEDGDKAQLASVMAHLAASLRVVAHLIQPFMMETSAA 481

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L +   +               +     PIFPR 
Sbjct: 482 IMAQLGLEPVSDLSVLALADFPDNTKVVAKGTPIFPRL 519


>gi|307703587|ref|ZP_07640529.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|307622994|gb|EFO01989.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 665

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/521 (38%), Positives = 308/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++ ++LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D S+  V S  + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHSLAQVASESIADYHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A +++ F+   
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHMIEPFMMGT 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +               +     PIFPR 
Sbjct: 480 SRAVLAQLGLAEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|312142731|ref|YP_003994177.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903382|gb|ADQ13823.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 652

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 215/513 (41%), Positives = 332/513 (64%), Gaps = 7/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++T I YP+ + HIGHAY  + AD +AR+ ++ G D +F TG+DEHGQKI + A
Sbjct: 2   SKDTYYVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMHGYDTMFLTGSDEHGQKIERKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G  TK +VD+   +F+++   LDI YD FIRTTE+RH    + ++KK+ DKGDIYKG
Sbjct: 62  AAEGKDTKEYVDEIVASFKELWKKLDIDYDYFIRTTEERHEKVVQKIFKKLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY    E+++++ ++ +    +     H PV+W+EE+ YFF++S Y D+LL + + 
Sbjct: 122 KYEGWYCTPCESFWSERQLEEEQGEKVCPDCHRPVEWVEEQSYFFKMSKYADRLLEHIKE 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P  RRNE+ISF+++GL DLS+SR TFDWGI +P D  +++YVWIDAL+NY+T  
Sbjct: 182 HPQFIEPESRRNEMISFIENGLDDLSVSRTTFDWGIPVPIDEDHVIYVWIDALSNYITAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +   +   +WPADLH++GKDILRFH + WP  L++ +L LPK+VF HG++L K  K
Sbjct: 242 GY-QSDPENFEHYWPADLHLVGKDILRFHTVIWPIILMALDLELPKQVFGHGWLLSKSGK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ ++ + G DA+RY+L+RE+A G DG Y  + L +R+N+DLAN +GNL+
Sbjct: 301 MSKSKGNVVDPVVLVNDFGKDAIRYYLLREVAFGTDGTYSTEALIQRINSDLANDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+VSM+ + +D  IP  G     D+ ++ + +++  E+ + M+      AL ++  LV 
Sbjct: 361 NRTVSMVEQYFDSNIPVVGEKEAVDQELIDLTAKIKVEVEKEMEELKYTVALERIWDLVR 420

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L +      R  TVLY  +E +R +A++L+ F+ +   KI + +   
Sbjct: 421 RTNKYIDQTTPWILGRDESKKSRLGTVLYNLLESLRIIAVMLKPFLTETPLKIGEQIGHL 480

Query: 481 DE--NRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            E  N  ++++    LK    +    D IFPR 
Sbjct: 481 SEIKNADWEAVKWGGLKSDVKIVN-GDAIFPRI 512


>gi|306834069|ref|ZP_07467189.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423642|gb|EFM26788.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 667

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 196/522 (37%), Positives = 306/522 (58%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  ++  YI+T I YP+ + HIG AY  I  DVLAR+ R+   +V + TG DEHGQKI +
Sbjct: 1   MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H      +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAADVKKLWEMLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G+         + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++ ++P+FI P  R NE+I +F++ GL+DL++SR +F WG+K+P +P++++YVWID
Sbjct: 181 RLVEFFHAYPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +  KFW      H++GKDILRFH+IYWP  L+  ++ LP ++ 
Sbjct: 241 ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K + G +P      T  D  +  V    L E  + M     
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGDVPAYVENVTAFDADLAGVVEEKLAEYHKQMNAVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  V +++S  ++Y D   PW L K +   D  + V+      +R +A L+Q F+  
Sbjct: 421 PRALDAVWNIISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I + L +  +             G  +     PIFPR 
Sbjct: 481 TSNAIMEQLGLGSDFDLENLTLAGFPEGVKVVAEGTPIFPRL 522


>gi|223933652|ref|ZP_03625630.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330833043|ref|YP_004401868.1| methionyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223897682|gb|EEF64065.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329307266|gb|AEB81682.1| methionyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 667

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/519 (38%), Positives = 311/519 (59%), Gaps = 11/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I YP+ + HIG AY  I  DVLAR+ RL G +V + TG DEHGQKI + A
Sbjct: 2   TKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G
Sbjct: 62  KEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLG 121

Query: 123 CYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            YSGWYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL
Sbjct: 122 EYSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKL 181

Query: 177 LSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           + ++ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL
Sbjct: 182 VEFFNAHPDFIQPDGRMNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDAL 241

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP  + +HG
Sbjct: 242 LNYATALGYGQEETINYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDLLVAHG 301

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +L
Sbjct: 302 WFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYEL 361

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RA
Sbjct: 362 ANDLGNLLNRTVAMINKYFSGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  V +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +N
Sbjct: 422 LEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSN 481

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            I + L +             L  G  +     PIFPR 
Sbjct: 482 AIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 520


>gi|47569887|ref|ZP_00240554.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553421|gb|EAL11805.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 626

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 209/490 (42%), Positives = 321/490 (65%), Gaps = 14/490 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DISYDD
Sbjct: 1   MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNA 152
           FIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + + V    +G     
Sbjct: 61  FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 120

Query: 153 QHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKD 206
             +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+   K GL+D
Sbjct: 121 GKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H++GK+
Sbjct: 181 LAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKE 240

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+DALR
Sbjct: 241 IVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALR 300

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP      TE
Sbjct: 301 YYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKANVTE 360

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
            DE++++     L+++ E M+N     AL+ +  LVS  ++Y D  +PW L K   + ++
Sbjct: 361 FDETLVAFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDENDREK 420

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLD--QRLKPGFMLH 500
            ++V+    EV+RQ  I+L  F+    +K+F  L + +E +  ++SL     +  G  + 
Sbjct: 421 LASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTEEAHTSWESLSTIGCIPAGTKVE 480

Query: 501 KTFDPIFPRF 510
           K  +PIFPR 
Sbjct: 481 K-GNPIFPRL 489


>gi|293365638|ref|ZP_06612347.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|291316006|gb|EFE56450.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037]
          Length = 679

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/521 (38%), Positives = 308/521 (59%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++ ++LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D S+  V S  + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHSLAQVASESIADYHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A +++ F+   
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHMIEPFMMGT 493

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +               +     PIFPR 
Sbjct: 494 SRAVLAQLGLAEVSSLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|222093808|ref|YP_002527857.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221237855|gb|ACM10565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 626

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 210/490 (42%), Positives = 319/490 (65%), Gaps = 14/490 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DISYDD
Sbjct: 1   MARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYDD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNA 152
           FIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + + V    +G     
Sbjct: 61  FIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVVG 120

Query: 153 QHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKD 206
             +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+   K GL+D
Sbjct: 121 GKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H++GK+
Sbjct: 181 LAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKE 240

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+DALR
Sbjct: 241 IVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALR 300

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP      TE
Sbjct: 301 YYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKENVTE 360

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
            DE++++     L+++ E M+N     AL+ +  LVS  ++Y D  +PW L K   + ++
Sbjct: 361 FDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDENDREK 420

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLD--QRLKPGFMLH 500
            ++V+    EV+RQ  I+L  F+    +K+F  L + DE +  + SL     +  G  + 
Sbjct: 421 LASVMAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGLTDEAHISWGSLSTIGCIPAGTKVE 480

Query: 501 KTFDPIFPRF 510
           K   PIFPR 
Sbjct: 481 K-GQPIFPRL 489


>gi|55822425|ref|YP_140866.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738410|gb|AAV62051.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 667

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 207/521 (39%), Positives = 312/521 (59%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G Y
Sbjct: 63  AGITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +Y+ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FYKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFSWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++   V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMST 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                   +     PIFPR 
Sbjct: 483 SNAIMEQLGLPVVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|116627343|ref|YP_819962.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100620|gb|ABJ65766.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 667

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 207/521 (39%), Positives = 313/521 (60%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  + + +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G Y
Sbjct: 63  AGITPQEYVDSMAVDVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +Y+ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FYKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFDGQVPAYIENVTDFDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++   V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMST 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                   +     PIFPR 
Sbjct: 483 SNAIMEQLGLPVVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|315613349|ref|ZP_07888258.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314584|gb|EFU62627.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 679

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 203/522 (38%), Positives = 312/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDSMAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQ+
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQN 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYGQEDHANYDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D ++  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDNALAQVAEQSISDFHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEEHRDQLASVMSHLAASLRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A E    ++L+   L     +     PIFPR 
Sbjct: 494 SRAVLTQLGLA-EVASLENLNLADLPSDVNVVAKGTPIFPRL 534


>gi|148992454|ref|ZP_01822149.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147928771|gb|EDK79784.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
          Length = 665

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 313/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T +V+VD+ +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|55820534|ref|YP_138976.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736519|gb|AAV60161.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 667

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 207/521 (39%), Positives = 312/521 (59%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G Y
Sbjct: 63  AGITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +Y+ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FYKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++   V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMST 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                   +     PIFPR 
Sbjct: 483 SNAIMEQLGLPVVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|312277854|gb|ADQ62511.1| Methionyl-tRNA synthetase MetG [Streptococcus thermophilus ND03]
          Length = 667

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 207/521 (39%), Positives = 312/521 (59%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQRAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ +KGDIY G Y
Sbjct: 63  AGITPQEYVDSMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G          + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +Y+ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FYKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFSWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  N  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQNEHGNFDLFWQNDKNHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYLARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K +DG +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFDGQVPAYIENVTDYDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K   + ++   V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDEEQLRAVMAHLAASLRVVAHLIQPFMMST 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                   +     PIFPR 
Sbjct: 483 SNAIMEQLGLPVVFDLENLELSGFPENVTVISKGTPIFPRL 523


>gi|297622523|ref|YP_003703957.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297163703|gb|ADI13414.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 655

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 193/506 (38%), Positives = 282/506 (55%), Gaps = 11/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y +T I Y NA+PHIGHAY   + DV+ RFHRL G D LF TGTDEHG+KI KAA  AG
Sbjct: 30  YYATTPIFYVNAEPHIGHAYTTTLVDVVTRFHRLKGDDTLFLTGTDEHGEKIQKAADAAG 89

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ + + D+ ++ F+D  + L I+YD+FIRTTE RH      +  ++ + GDI  G Y G
Sbjct: 90  LSPQAYTDRVAKKFQDTWNSLGIAYDEFIRTTEARHQAVVHEVLTRVYEAGDIIFGEYGG 149

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E YY D E+    +G        P+++  EE YFFR+  Y+  L    E +PE 
Sbjct: 150 LYCVGCERYYTDKEL----EGGKCPQHDIPLEYRSEENYFFRMERYRPWLRETLEENPEL 205

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+S ++  + DLS+SR      WGI +P D  ++ YVW DAL NY +    
Sbjct: 206 IRPERYRNEVLSILREPIGDLSISRPRSRVPWGIPLPWDENHVTYVWFDALINYYSALKS 265

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D       ++WP   H I KDIL+ H ++WP  L SA LPL + +  HG+ L  G K+S
Sbjct: 266 RDAV----ERYWPFVEHFIAKDILKPHGVFWPTMLKSAGLPLYRHLNVHGYWLVDGGKMS 321

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P+++ ++ G DA RY+L+R++  G D  + + GL +R+NADLAN +GNL++R
Sbjct: 322 KSKGNVVRPLDLKDKYGNDAFRYYLLRDMTFGLDASFSEVGLAERINADLANDLGNLLNR 381

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M+ K   G++P PG     DE++      + + + E        RA+  V+  V + 
Sbjct: 382 TLGMLGKYRGGVVPAPGPLEPIDEALRDAFVGLPERMTELFDALQFDRAIESVLEAVRKA 441

Query: 425 DRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++Y    +PW L K     R  TVLY  VE +R  +ILL   +P  A ++   L +  + 
Sbjct: 442 NKYIAETQPWVLAKEGAAGRLDTVLYGCVEALRCASILLSPVIPTKAAELQQQLGLKGDY 501

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
               +    L P         P+FPR
Sbjct: 502 TLQDAATWGLTPAGTPTAPGAPLFPR 527


>gi|322372362|ref|ZP_08046898.1| methionine--tRNA ligase [Streptococcus sp. C150]
 gi|321277404|gb|EFX54473.1| methionine--tRNA ligase [Streptococcus sp. C150]
          Length = 667

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 202/521 (38%), Positives = 314/521 (60%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +L+ISYD FIRTT+  H      +++++ ++GDIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKDLWQLLNISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+   G+         + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEQGKVIGGVAPSGHEVELVSEESYFFKLSNYADRLAA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FFKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  +  G+   FW  +     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQDEHGNFDLFWQNNENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G +PT     T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFGGQVPTYVENVTDFDADLSKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K +   ++ + V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDSNKEQLAAVMAHLAASLRVVAHLIQPFMMTT 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L ++                  +     PIFPR 
Sbjct: 483 SNAIMEQLGLSGTFDLENLELSGFPENVTVVSKGTPIFPRL 523


>gi|149003418|ref|ZP_01828307.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237649434|ref|ZP_04523686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821933|ref|ZP_04597778.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758601|gb|EDK65599.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 665

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPEGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|94969057|ref|YP_591105.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551107|gb|ABF41031.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 671

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 219/516 (42%), Positives = 316/516 (61%), Gaps = 15/516 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K YI+T I Y NA+PHIGH Y  +  D +AR  R+ G+D  F TGTDEHGQKI ++A
Sbjct: 2   SKDKFYITTPIYYVNARPHIGHTYTTVACDAIARRKRMLGVDTFFLTGTDEHGQKIERSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +G + + FVD+ S  FR + D + +SYD FIRTT+  H    + L K++ D+G IYKG
Sbjct: 62  MASGKSDQQFVDEVSAEFRGLWDRMGLSYDKFIRTTDPEHIRGVQALIKRLQDRGYIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            YSG Y + DE Y     V     G        P + + EE YFF+LSA ++ LL  Y S
Sbjct: 122 KYSGQYCVYDELY-----VDVDTPGAPCPECGRPTETVHEENYFFKLSAMEEPLLKLYAS 176

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P FI P  RRNEVISFV+ GLKDLS+SR TF WGI +PDDP +++YVWIDAL NY+T  
Sbjct: 177 DPNFIRPEARRNEVISFVRGGLKDLSISRTTFKWGIPVPDDPAHVIYVWIDALCNYITAL 236

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+  +      KFWPAD+H++GK+I+RFH ++WPA L++A LPLPK + +HG++L +  K
Sbjct: 237 GFGSDDTKLYDKFWPADVHMVGKEIVRFHCVFWPAVLMAAGLPLPKSIVAHGWLLFEESK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN++    +++ +G DALRYFL+RE+  G+DG +  D L +R NADLANG+GNL 
Sbjct: 297 MSKSRGNIVRTETILDVLGADALRYFLMREVVFGQDGSFSFDALVQRFNADLANGLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           SR++SMI + + G +P P +    T +D++I  + ++ +++           +AL     
Sbjct: 357 SRTLSMITRYFKGEVPYPSSAATRTAADDAIAKIAAKTIEDFGAAFDQYQFSKALEAAWG 416

Query: 420 LVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           LV+ VD+Y    +PW L +   +    R +TVLY   E +R +  L    +P    KI+ 
Sbjct: 417 LVAAVDKYIVENEPWALAEKQDEQSRARLATVLYTAAEALRIVTALAYPVIPDSTAKIWS 476

Query: 476 ILFVAD--ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            L + D  + +  +    +L  G  L K  + +FPR
Sbjct: 477 QLGLGDIKQFKLAEIKWGQLHLGTKLGK-VEGVFPR 511


>gi|225858596|ref|YP_002740106.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225720402|gb|ACO16256.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|332077203|gb|EGI87665.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 665

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|322392166|ref|ZP_08065628.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145066|gb|EFX40465.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 665

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 200/521 (38%), Positives = 307/521 (58%), Gaps = 12/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQIFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ +++SHP+FI P  R NE++    + GL+DL++SR TF WG+++P +P++++YVW D
Sbjct: 180 RLVEFFKSHPDFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVQVPSNPRHVVYVWFD 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++  
Sbjct: 240 ALLNYVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIG 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVIYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      T+ D  +  V  + + +    M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTDFDNELAQVAEQSISDYHTYMEAVNYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      +R +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASLRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +   L +A+ +               +     PIFPR 
Sbjct: 480 SRAVLTQLGLAEVSSLENLSLADFPANVTVVAKGTPIFPRL 520


>gi|157964833|ref|YP_001499657.1| methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844609|gb|ABV85110.1| Methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 508

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 248/510 (48%), Positives = 344/510 (67%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S  FR +   + IS DDFIRTTE RH +   + W+K+ + G IY+G Y 
Sbjct: 64  NIDPQQFTDQTSEIFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLENGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA++++ E+              PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFFDESELTSD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+ ++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVSNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK +  HG+  ++G+KISK
Sbjct: 239 PDKQSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMVHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            S + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  
Sbjct: 359 TSFVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKE 478

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            R F+ L  D  L  G  + +    IFP+F
Sbjct: 479 ERLFKHLIRDYTLTAGSNILEP-TIIFPKF 507


>gi|301793944|emb|CBW36340.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 665

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|15900681|ref|NP_345285.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|116516229|ref|YP_816183.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148989872|ref|ZP_01821166.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|161410751|ref|NP_358290.2| methionyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|168484447|ref|ZP_02709399.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|194397413|ref|YP_002037433.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|54039688|sp|P67581|SYM_STRR6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54042048|sp|P67580|SYM_STRPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14972263|gb|AAK74925.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|116076805|gb|ABJ54525.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147924814|gb|EDK75898.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|172042338|gb|EDT50384.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|194357080|gb|ACF55528.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|332076067|gb|EGI86533.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 665

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|322517312|ref|ZP_08070187.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124009|gb|EFX95562.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 667

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/521 (39%), Positives = 309/521 (59%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ ++GDIY G Y
Sbjct: 63  AGITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+   G          + V+ + EE YFF+LS Y D L  
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEQGNVIGGVAPSGHEVELVSEESYFFKLSNYADHLTD 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FFKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  +  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMMTT 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                   +     PIFPR 
Sbjct: 483 SNAIMEQLGLPVVFDLENLELSGFPENVTVVSKGTPIFPRL 523


>gi|225856462|ref|YP_002737973.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225725786|gb|ACO21638.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 665

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|225874399|ref|YP_002755858.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793634|gb|ACO33724.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 770

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 228/538 (42%), Positives = 317/538 (58%), Gaps = 39/538 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E +K Y++T I Y NA+PHIG +Y  ++AD +AR  R  G++  F TGTDEHGQKI +
Sbjct: 1   MPESKKFYLTTPIYYVNARPHIGTSYTTLVADTIARRKRALGIETWFLTGTDEHGQKIER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AG + + F D+ S  FR + D + + YDD+IRTTE RH    + L+  + ++G IY
Sbjct: 61  SAEKAGCSPQEFTDEVSAQFRGLWDRMGLEYDDYIRTTEPRHKRGVQKLFALLKERGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y+G Y + DEAY +      G  G          + + EE YFF+LSA++  LL YY
Sbjct: 121 KGTYTGQYCVSDEAYVD------GPPGIACPDCGRITETVSEENYFFKLSAFERTLLEYY 174

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+HPEFI P  RRNEV+SFV+SGLKDLS+SR +F+WGI +P D ++++YVW+DAL NY+T
Sbjct: 175 EAHPEFIQPETRRNEVLSFVRSGLKDLSISRTSFNWGIPVPGDEKHVIYVWMDALANYIT 234

Query: 241 TTGY---LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           + G+           AKFWPADLH+IGK+I RFH +YWPAFL++A LPLPK + +HG++L
Sbjct: 235 SLGWESEDAAARARFAKFWPADLHIIGKEISRFHCVYWPAFLMAAGLPLPKSIVAHGWLL 294

Query: 298 HKGEKISKSLGNVIDPIEV---------------IEEVGVDALRYFLVREIACGKDGFYD 342
            +  K+SKS GN++    +                +  G D LRYFL+RE+  G+DG + 
Sbjct: 295 FEQNKMSKSRGNIVRAETILDVFGAMKPDLPKAGQDRFGADVLRYFLLREVVFGQDGSFS 354

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            D L +R NADLANG GNLVSR++SMI K +DG++P     +     I    +R L    
Sbjct: 355 FDALVQRYNADLANGYGNLVSRTLSMIQKYFDGVVPANDGASA---EIGEAAARTLTAFD 411

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV-----LYVTVEVIRQ 457
           E+M      RAL  V +LV  VD Y  AQ PW+ K+   D A        LY   E IR 
Sbjct: 412 EHMAGLDFSRALETVWTLVGAVDGYLTAQAPWKQKEGVTDDAQAALRARSLYTAAEAIRV 471

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQS------LDQRLKPGFMLHKTFDPIFPR 509
           +  L+   +P  A +++  L + D     +           L+PG  L     P+FPR
Sbjct: 472 ITTLVYPVMPWAAAQVWAQLGLGDIEAAAKRGELKNLAWGGLQPGTKLG-VLGPVFPR 528


>gi|307127662|ref|YP_003879693.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484724|gb|ADM91593.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 665

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|148997133|ref|ZP_01824787.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149007671|ref|ZP_01831288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|168575450|ref|ZP_02721386.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067392|ref|YP_003876358.1| methionyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147756833|gb|EDK63873.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760826|gb|EDK67797.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|183578466|gb|EDT98994.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408929|gb|ADM84356.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 665

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|169832629|ref|YP_001694248.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995131|gb|ACA35743.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 665

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPIGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|149010582|ref|ZP_01831953.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168490882|ref|ZP_02715025.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168492944|ref|ZP_02717087.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221231586|ref|YP_002510738.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854300|ref|YP_002735812.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|147765063|gb|EDK71992.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|183574634|gb|EDT95162.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577043|gb|EDT97571.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220674046|emb|CAR68559.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722945|gb|ACO18798.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 665

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|312864247|ref|ZP_07724481.1| methionine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100248|gb|EFQ58457.1| methionine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 667

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/521 (39%), Positives = 311/521 (59%), Gaps = 15/521 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +D+  +LDISYD FIRTT+  H      +++++ ++GDIY G Y
Sbjct: 63  AGITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+   G          + V+ + EE YFF+LS Y D+L +
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDEQGNVIGGIAPSGHEVELVSEESYFFKLSNYADRLTA 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++ HPEFI P  R NE++ +F++ GL+DL++SR TF WG+K+P DP++++YVWIDAL N
Sbjct: 183 FFKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDALIN 242

Query: 238 YLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           Y+T  GY  +  G+   FW  D     +H+IGKDILRFH+IYWP  L++ +LPLP ++ +
Sbjct: 243 YITALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRLVA 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 303 HGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINY 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+V+MI K + G +P      T+ D  +  V +  ++E  + M      
Sbjct: 363 ELANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVDFP 422

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   
Sbjct: 423 RALDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMMTT 482

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I + L +                   +     PIFPR 
Sbjct: 483 SNAIMEQLGLPVVFDLENLELSGFPENVTVVSKGTPIFPRL 523


>gi|317050747|ref|YP_004111863.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316945831|gb|ADU65307.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 629

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 201/475 (42%), Positives = 304/475 (64%), Gaps = 5/475 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGHAY  +  DV ARF RL G DV+F TGTDEHG KI +AA+ 
Sbjct: 3   QTYYVTTPIYYVNDVPHIGHAYTTVACDVAARFQRLMGRDVMFLTGTDEHGMKIEQAARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T     ++  + F+++   LDIS+DDFIRTTEKRH      L++++ ++GDIY G Y
Sbjct: 63  NGETPIELANRVVKRFQELWTTLDISHDDFIRTTEKRHEMGVHKLFRQLREQGDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E+++ + +V +  +          V  ++E+ YFFR+S Y + LL + +++P
Sbjct: 123 EGWYCTPCESFWTETQVGEAIN---CPDCGRSVDKLKEKSYFFRMSKYAEPLLEHIKTNP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI P  RRNE+I F++SGL+DLS+SR TFDWGIK+PDDP++++YVW DAL+NY+T  GY
Sbjct: 180 GFIQPESRRNEIIRFIESGLRDLSISRTTFDWGIKVPDDPEHVIYVWFDALSNYMTAIGY 239

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + +    ++WPA  HV+GKDILRFH +YWP FL++A + LP++VF+HG+   +G+K+S
Sbjct: 240 GSDEE-KWQRYWPASAHVVGKDILRFHTVYWPTFLMAAGIELPRQVFAHGWWTVEGKKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSL N +DP  ++E+ GVD +RYFL+RE+  G DG +    L  R+N+DLAN +GNL+SR
Sbjct: 299 KSLMNAVDPNILVEKFGVDPIRYFLLREVPFGLDGDFSMQALVGRINSDLANDLGNLLSR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +  M+ + +DG+ P  G   E +++++      ++  R +M+    +RAL ++  +V  +
Sbjct: 359 TSGMMFRYFDGLTPASGPLQEREQALIQATGERMEGYRADMEVMAFNRALMKIWEIVGSL 418

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++Y    +PW L K        T L  T E +R +A  +  F+P  + KI   L 
Sbjct: 419 NKYIVETEPWALHKAGKTTELQTSLATTAEGLRVIANAVYPFMPSSSRKILQALG 473


>gi|222152637|ref|YP_002561812.1| methionyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113448|emb|CAR41140.1| methionyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 668

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/522 (37%), Positives = 309/522 (59%), Gaps = 12/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ R+    V + TG DEHGQKI  
Sbjct: 1   MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHQVFYLTGLDEHGQKIQT 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  ++  +++ ++LDISYD FIRTT+  H +    +++K+  + DIY
Sbjct: 61  KAEEAGITPQEYVDGMAKGVKELWELLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++  +G          + V+W+ EE YF RL  Y D
Sbjct: 121 LGEYSGWYSVSDEEFFTESQLEEVFRDENGNVIGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           KL++++  HPEFI P  R NE+I +F++ GL+DL++SR TF WG+K+P +P++++YVWID
Sbjct: 181 KLVAFFNEHPEFIQPEGRMNEMIKNFIEPGLEDLAVSRTTFTWGVKVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           AL NY T  GY      +   FW      H++GKDILRFH+IYWP  L+  ++ LP+++ 
Sbjct: 241 ALLNYATALGYGQEDKANFETFWNNGTVFHMVGKDILRFHSIYWPILLMMLDMKLPERLI 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N
Sbjct: 301 AHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLI 410
            +LAN +GNL++R+V+MI K + G IP      T  D  +  + +  + +  + M+    
Sbjct: 361 YELANDLGNLLNRTVAMINKYFGGKIPAYTENVTAFDGELQDLVTEKITDYHKQMETVDY 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPK 468
            RAL  + +++S  ++Y D   PW L K + D+   ++V+      +R +A L+Q F+  
Sbjct: 421 PRALDAIWAIISRANKYIDETAPWVLAKEDGDKEQLASVMAHLAASLRVVAHLIQPFMMT 480

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +N I + L +             +     +     PIFPR 
Sbjct: 481 TSNAIMEQLGLGQSFDLENLSLAGMPSDITVISKGQPIFPRL 522


>gi|157826102|ref|YP_001493822.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|157800060|gb|ABV75314.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 512

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 249/511 (48%), Positives = 349/511 (68%), Gaps = 13/511 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL GLDV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRGLDVIFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +  V+ IS DDFIRTTE RH +   + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMAVMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA++++ E+              PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFFDESELTSD----GLAPTGAPVEWVKEPSYFFNLSQWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   S  KFWPADLHV+GKDILRFH +YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 PDEQSSYGKFWPADLHVVGKDILRFHTVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I E G+D +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ RS
Sbjct: 299 SLGNTIDPIKLINEFGIDQIRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRS 358

Query: 366 VSMILKDYDGMIPTPGAFTESDE----SILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            + + K+ +G +P     +  D+     IL   S+  ++    M    I++ L  +I+L 
Sbjct: 359 TAFVYKNNEGKVPLLTQ-SVIDKIYELPILKTASKFAEQNILLMDKTEINKILDNIINLA 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+LQ F+P  ANK+ + L ++ 
Sbjct: 418 EEANIYIDSEAPWNLKKTDPDKMLEVLYTLLEVLRYIAIMLQPFIPSSANKMLNQLGISK 477

Query: 482 ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           E R F+ L  D  L+ G  + +    IFPRF
Sbjct: 478 EERLFKHLIRDYALRAGSNILEP-TIIFPRF 507


>gi|284033606|ref|YP_003383537.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812899|gb|ADB34738.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 523

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/521 (40%), Positives = 309/521 (59%), Gaps = 13/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  Y++T I Y  A PHIG AY  +  DVL R+H   G    + TGTDEHG+K+ +
Sbjct: 1   MSGEKAYYVTTPIYYVTAAPHIGSAYTTVAGDVLTRWHAQRGERKWYLTGTDEHGEKVLR 60

Query: 61  AAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AQ  G++ + + D+     ++     +DI+YDDFIRTTE RH +  +   + + D+GD+
Sbjct: 61  SAQAQGMSPQEWTDKLVEQAWKPAWVDVDIAYDDFIRTTEPRHTERVQEFVQALYDQGDV 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           YKG Y G Y +  E +    ++    DG Q        ++ + E  YFFRLSAY DKLL 
Sbjct: 121 YKGEYEGLYCVGCEEFKLPADIRTDDDGTQRCMIHGTELETVSETNYFFRLSAYADKLLE 180

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            YE+HPEF+ P   RNEVI+FVK GL+DLS++R TFDWGI +P D  +++YVW+DAL NY
Sbjct: 181 LYETHPEFVAPSSARNEVIAFVKQGLQDLSITRSTFDWGIPVPWDSDHVLYVWVDALLNY 240

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            T  GY  +PD   A+ WPAD+H++GKDILRFHA+ WPA L++A +P+PK+VF+HG++L 
Sbjct: 241 ATAAGYGADPDR-FAELWPADVHLVGKDILRFHAVIWPAMLIAAGMPVPKQVFAHGWLLV 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS    I P E+ +  G DA RY+ +R I  G DG +  + L     ++LANG+
Sbjct: 300 GGEKMSKSKLTAIAPKEITDHFGSDAFRYYFLRTIQFGADGSFSWEHLNAVYTSELANGL 359

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL SR  +M+ K +DG +P P     +++++    +  +      +     H ALA V 
Sbjct: 360 GNLASRIAAMVGKYFDGELPEPTDHGPAEQALADKLAETVAAADRAIDTLAFHDALAAVN 419

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            LV  V+ Y   Q+PW++ K    RA  +T+LY + EV+R +A+L    +PK A K++ +
Sbjct: 420 DLVGAVNGYVSEQEPWKVAKDESQRARLATILYTSAEVLRAVAVLHHPTMPKTATKLWTL 479

Query: 477 LF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L        +AD+         +L  G  L K  + +FPR 
Sbjct: 480 LGAEAKLGPLADQRIPSAGTWGQLPAGSTLTK-GEALFPRL 519


>gi|297587469|ref|ZP_06946113.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574158|gb|EFH92878.1| methionine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 665

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 203/512 (39%), Positives = 319/512 (62%), Gaps = 9/512 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQNAGV--TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +      ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKAHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++  G            V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQLKDGK----CPDCGRDVHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++   SG L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDEE-LFKKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+IP P    + D+S++SV      ++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKSLISVVEGCQGKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI + + 
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKIKEQIG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +++       +  +   G  + +  + +F R 
Sbjct: 478 LSEIKWEDGKVFGKTIAGTKV-QRGENLFNRL 508


>gi|15458285|gb|AAK99500.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae R6]
          Length = 679

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 494 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|323342276|ref|ZP_08082508.1| methionine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463388|gb|EFY08582.1| methionine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 644

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 201/520 (38%), Positives = 315/520 (60%), Gaps = 19/520 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  YI+TAIAY +A+PHIG+ YE+++AD +ARF R  G +V F TGTDEHGQKI  
Sbjct: 1   MKNNKNYYITTAIAYTSAKPHIGNIYEIVLADSIARFKRAQGYNVRFQTGTDEHGQKIED 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   +  K +VD  S   R + D++++ YD FIRTT+  H +  + ++KK+ D+GD+Y
Sbjct: 61  NAKEHNMLPKDYVDNISGVIRGLFDLMNVKYDYFIRTTDDYHKEQVQKVFKKLFDQGDLY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E++Y+D +V    + +        V   +E  YFF++S YQ++L+ Y 
Sbjct: 121 KGNYEGWYCKSCESFYSDSQV----EDETCPECGGKVVRQQESCYFFKMSNYQERLVQYI 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + +P FI P  R+NE++    K  L DL++SR +F WGI +  DP++++YVWIDAL NY+
Sbjct: 177 KDNPSFIQPESRKNEMLQNFLKEDLYDLAVSRTSFKWGIPVDFDPEHVVYVWIDALINYI 236

Query: 240 TTTGYLD--NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T  GY    N      +FWPAD+H+IGKDILRFH IYWP  L++ ++ LPK++F H ++L
Sbjct: 237 TGLGYDVDGNNGPLFDEFWPADVHLIGKDILRFHTIYWPILLMALDIELPKQIFGHPWLL 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GN +   ++   +GVD +RY ++ E+   +DG    + + +R+N DLAN 
Sbjct: 297 TGDSKMSKSKGNAVYVDDLTSVLGVDPVRYIMLHEMPFERDGHLTYELMIERINTDLANI 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNLV+R++SM  K +DG++       + D+ +++ C  ++  +   M    +  A++++
Sbjct: 357 IGNLVNRTISMTNKYFDGVLTVNHVDDDMDDELIAACKNLIPNVEAKMDTLHVADAISEI 416

Query: 418 ISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++L  + ++Y D  +PW L K  T  +R  TVLY   E+IR   I L++F+P+ + +I  
Sbjct: 417 VALFRKGNKYIDDTQPWVLAKDETKQERLQTVLYNLTELIRIGGIALESFIPETSQRILA 476

Query: 476 ILFVADENRCFQS-----LDQRLKPGFMLHKTFDPIFPRF 510
            L    E+  F+S     L +  KP   +    D IF R 
Sbjct: 477 QLQT--EHTSFESAKTFGLFELNKP---VVSKTDIIFNRL 511


>gi|220928528|ref|YP_002505437.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998856|gb|ACL75457.1| methionyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 654

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 196/513 (38%), Positives = 306/513 (59%), Gaps = 9/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y++TAIAY +++PHIG+ +E+++AD  ARF R+ G DV F TGTDEHGQKI   A
Sbjct: 2   SKKPYYLTTAIAYTSSKPHIGNTFEIVLADSFARFKRMQGYDVRFQTGTDEHGQKIELKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG++ K +VD  ++  + + D+++ SYD FIRTT+  H    + ++KK+ ++GDIYKG
Sbjct: 62  KEAGISPKEYVDGFAKEIQRICDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYEQGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y    EA++   ++  G                +EE YF +LS Y D+L+ +   
Sbjct: 122 YYEGMYCTPCEAFFTSSQLVDGK----CPDCGRECHPAKEEAYFLKLSKYADRLIQHINE 177

Query: 183 HPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEFI P  R+NE+++    +GL+DL +SR +F WGI +  D ++++YVWIDAL+NY+T 
Sbjct: 178 HPEFIQPESRKNEMMNNFLLAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWIDALSNYITG 237

Query: 242 TGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+  + +      KFWPADLH+IGKDILRFH IYWP  L++  +PLPK+VF H ++L  
Sbjct: 238 LGFDADGNSDEMFNKFWPADLHLIGKDILRFHTIYWPIMLMALEVPLPKQVFGHPWLLMG 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNVI   E+++  GVDA+RY+++ ++    DG    + + +R+N+DLAN +G
Sbjct: 298 NGKMSKSKGNVIYADELVDIFGVDAVRYYILHDMPFDNDGVISWELITERINSDLANVLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R ++M  K + G++       + D  ++ +  +  + + E M    +  AL+++ +
Sbjct: 358 NLVNRVIAMTNKYFSGVVNNSNVREDIDNELIELTLKTPETVVEKMDKLRVADALSEIFT 417

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    ++Y D   PW L K      R  TVLY  VE I   A LL+AF+P+ A KI   L
Sbjct: 418 LFKRCNKYIDETMPWILAKDEAKKARLETVLYNLVEGIVTGASLLEAFMPETAQKIVAQL 477

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                      +  + K G  + +  + +F R 
Sbjct: 478 NTTVRPLKDMKVFGQYKSGTKVTENPEILFLRM 510


>gi|114776564|ref|ZP_01451609.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553394|gb|EAU55792.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 512

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 214/514 (41%), Positives = 322/514 (62%), Gaps = 12/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y++T I Y N +PH+GH Y  I ADVLAR+ R+ G DV F TG DEHGQK+ +AA+ 
Sbjct: 2   ESYYVTTPIYYVNDEPHLGHIYTTIAADVLARYQRMAGRDVFFLTGVDEHGQKVQQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      DQ    ++ +   L I+ DDFIRT+  RH    + +W+++ + G IYKG Y
Sbjct: 62  RGIEPIELADQVVERYQSLWPELAITNDDFIRTSSDRHRRGVQAMWRRLENAGAIYKGFY 121

Query: 125 SGWYSLRDEAYYNDDEVYK--GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             WY +  E Y+ + ++      + ++       V+ ++EE YFFRLSAYQD+LL Y  +
Sbjct: 122 EDWYCVPCETYWTETQLNDADCWEEKHCPDCKRAVEKVQEESYFFRLSAYQDRLLEYINA 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P  RRNEV+ FV+SGL DLS+SR TF WG+ +P D ++++YVWIDALTNYL+  
Sbjct: 182 NPDFIGPASRRNEVLRFVESGLNDLSVSRTTFSWGVPVPGDEKHVIYVWIDALTNYLSAL 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D       K+WPAD+H+IGKDILRFHAIYWP  L++A+LPLP+++F+HG+   +GEK
Sbjct: 242 GFPDQ---ELPKYWPADVHLIGKDILRFHAIYWPCMLMAADLPLPQRLFAHGWWTVEGEK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +++E+   D +RYFL+RE+  G+DG +    +K+R N+DLAN +GNL+
Sbjct: 299 MSKSKGNALRPADLLEQYDADVIRYFLLREVPFGQDGDFSFSAMKQRYNSDLANDVGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +RS++M+ K  DG++  PG     D ++++    + +++  +M  Q  H AL ++  +V 
Sbjct: 359 NRSLAMLNKYRDGVLAEPGDEQAVDRTLIADVEGMQRDVAAHMNKQAFHLALERISVVVR 418

Query: 423 EVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +RY +   PW L K  +  R +TVLY   E +R +A+ L  F+P   + + + +  A+
Sbjct: 419 HGNRYVEENAPWSLAKAGDEARLNTVLYHLAETLRLVALQLMPFMPGKMSAMLNQIQGAE 478

Query: 482 ---ENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
              +   F S      LKPG    K   P+FPR 
Sbjct: 479 LMSQTLTFASHGGWGLLKPGHQCEKP-QPLFPRM 511


>gi|149021655|ref|ZP_01835686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930116|gb|EDK81102.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 665

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 205/522 (39%), Positives = 313/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T +V+VD+ +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQVYVDRMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWILAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|225861309|ref|YP_002742818.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229840|ref|ZP_06963521.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254148|ref|ZP_06977734.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|225726725|gb|ACO22576.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390144|gb|EGE88487.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 665

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|301799802|emb|CBW32371.1| methionyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 665

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEKSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|157828900|ref|YP_001495142.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933624|ref|YP_001650413.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|157801381|gb|ABV76634.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908711|gb|ABY73007.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 508

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 250/510 (49%), Positives = 347/510 (68%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA++++ E+ +            PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFFDESELTRD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  + G+KISK
Sbjct: 239 LDEQSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNDGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            S + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  
Sbjct: 359 TSFVYKNNDAKVPLLTQGVIDKIYELPILKTASKCVEQNILLMDKTEINKILENIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKE 478

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            R F+ L  D  L  G  + +    IFP+F
Sbjct: 479 ERLFKHLIRDYTLTAGSNILEP-TIIFPKF 507


>gi|46580460|ref|YP_011268.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449879|gb|AAS96528.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234204|gb|ADP87058.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 663

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 201/518 (38%), Positives = 297/518 (57%), Gaps = 24/518 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ Y++T I Y NA+PH+GHAY  I+AD + RF RL G D  F TGTDEHG KI +AA+ 
Sbjct: 2   DRFYVTTPIYYVNAKPHLGHAYTTIVADSMRRFQRLLGKDTYFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ K FVD  S  FRD+   L + YD FIRTT+  H    +   +++ D GDIY G Y
Sbjct: 62  AGVSPKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    +G     Q  P +++ E+ YFFR+S YQ  L  +   +P
Sbjct: 122 GGHYCYGCERFYTEKELE---NGLCPQHQVKP-EYIAEKNYFFRMSKYQGWLKQHILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S + SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D      A +WP   H++ KDIL+ HA++WP  L +A L     +  HG+ L +  
Sbjct: 238 LGWPDGDR--FANYWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRDT 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P+E+I+  G++A RYFL+RE+  G D  + ++ L  R+NADLAN +GNL
Sbjct: 296 KMSKSLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR +SM  K + G++P PGA+TE DE++ ++ +   +             AL  +  LV
Sbjct: 356 YSRVLSMTAKYFGGVVPAPGAYTEEDETLRALAAEAQRNFCNLFGRVRFSNALESLWELV 415

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             +++Y D+  PW L K  +  R  TV+Y  +E +R++A+ L   +P+ A  +   L   
Sbjct: 416 RALNKYVDSAAPWTLFKQGDTKRLGTVMYTLLESMRKVAVHLLPVMPEAATSMLAQLGLE 475

Query: 479 -------VADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                  + +E   +      L+PG  +      +FPR
Sbjct: 476 VNVDAVDLGNEAETW----GGLQPGTTV-AGASNLFPR 508


>gi|238651000|ref|YP_002916856.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238625098|gb|ACR47804.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 508

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 250/510 (49%), Positives = 348/510 (68%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA++++ E+ +            PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFFDESELTRD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 LDEQSNYGKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            S + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  
Sbjct: 359 TSFVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKE 478

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            R F+ L  D  L  G  + +    IFP+F
Sbjct: 479 ERLFKHLIRDYTLTAGSNILEP-TIIFPKF 507


>gi|302388627|ref|YP_003824448.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199255|gb|ADL06825.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 644

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 208/518 (40%), Positives = 299/518 (57%), Gaps = 16/518 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R   YI+T I Y NAQPHIGHAY  I+AD LAR+HRL G D  F TGTDEHG+KIA+
Sbjct: 1   MKDR-IFYITTPIYYVNAQPHIGHAYTTIVADFLARWHRLAGYDTFFLTGTDEHGEKIAQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G   + FVD+ S  FR+  + L I YDDFIRTT++RH    + + +K+ D GDIY
Sbjct: 60  AAQKNGEEPQAFVDRVSARFREAWEKLCIEYDDFIRTTDERHKKVVQYVLQKVYDAGDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G Y +  E +  + E+  G             +   E  YFFR+  Y++ L  Y 
Sbjct: 120 YGEYEGLYCVGCERFLTEKELVDG----RCPDHGTVPERRREGNYFFRMEKYREWLRDYI 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           +++P+FI P   RNEV+S +   + DLS+S  R+   WGI +P D  ++ YVW DAL NY
Sbjct: 176 QANPDFIRPEGYRNEVLSMLSEPVGDLSISRPRQRVPWGIPLPWDEDHVTYVWFDALLNY 235

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++  GY         +FW    H++GKDIL+ HA++WP  L SA +PL + +   GF+L 
Sbjct: 236 VSALGY--PDGEKYHRFWTHAWHLVGKDILKPHAVFWPTMLKSAGIPLYRHLNVGGFLLG 293

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGNV+DP  + E+ G D +RY+L+RE+  G+DG   + GL +R NADLAN 
Sbjct: 294 PDGRKMSKSLGNVVDPFALAEKYGPDVVRYYLLRELPYGQDGAVGEPGLVERYNADLAND 353

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL+SR+V+MI K Y G IP PG     D  ++++   +   +   +    I  AL ++
Sbjct: 354 LGNLLSRTVTMIEKFYSGYIPAPGLSEGPDHELIALAEGLPDRLENLINGLEITEALKEI 413

Query: 418 ISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +   ++Y D   PW L K     +R +TV+Y   E +R +++ +   +P  + +I  
Sbjct: 414 WKFIGRANKYIDETAPWTLAKDPAKKERLATVIYNLAEALRIISVHISPVMPNTSGEIRR 473

Query: 476 ILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            L +ADE    ++S+    RL  G  +      IFPR 
Sbjct: 474 QLGIADEGLFTWESVRKWGRLPAGLKIGGKR-IIFPRI 510


>gi|15892969|ref|NP_360683.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|25009381|sp|Q92GS6|SYM_RICCN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15620165|gb|AAL03584.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 508

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 250/510 (49%), Positives = 347/510 (68%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +   + IS DDFIRTTE RH     + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKKAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA++++ E+ +            PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFFDESELTRD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 LDEQSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            S + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  
Sbjct: 359 TSFVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPDKMLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKE 478

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            R F+ L  D  L  G  + +    IFP+F
Sbjct: 479 ERLFKHLIRDYTLTAGSNILEP-TIIFPKF 507


>gi|298503207|ref|YP_003725147.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|298238802|gb|ADI69933.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
          Length = 679

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 204/522 (39%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G DV + TG DEHGQKI +
Sbjct: 15  MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYDVFYLTGLDEHGQKIQQ 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 74  KAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 133

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 134 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 193

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 194 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 253

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 254 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 314 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRNLPVGSDGTFTPEDYVGRINY 373

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 374 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 433

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 434 RALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 493

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 494 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 534


>gi|34581336|ref|ZP_00142816.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262721|gb|EAA26225.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 508

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 249/510 (48%), Positives = 348/510 (68%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY+++DEA++++ E+ +            PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVQDEAFFDESELTRD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 LDEQSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            S + K+ D  +P  T G   +  E  IL   S+V+++    M    I++ L  +I+L  
Sbjct: 359 TSFVYKNNDAKVPLLTQGVIDKIYELPILKTASKVVEQNILLMDKTEINKILENIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKK +PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKIDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKE 478

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            R F+ L  D  L  G  + +    IFP+F
Sbjct: 479 ERLFKHLIRDYTLTAGSNILEP-TIIFPKF 507


>gi|188997460|ref|YP_001931711.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932527|gb|ACD67157.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 628

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 216/508 (42%), Positives = 315/508 (62%), Gaps = 11/508 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y++T I Y N  PH+GHAY  + ADVLAR++R  G+   F TGTDEHGQKI K A+
Sbjct: 2   QEKFYVTTPIYYVNDVPHLGHAYTTVAADVLARYYRQIGVKTFFLTGTDEHGQKIQKTAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D+    F+++   L+ISYD FIRTT+  H    + +++K  + GDIY   
Sbjct: 62  EKGISPKELADKTHLAFKELWKKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLSE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y  +Y +  E +  + E+              P + ++EE YFFRLS Y DKLL +YE +
Sbjct: 122 YESYYCVGCEEFKTETEIKDYD--YKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEKN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           PEFILP  R+NEV+SFVK GLKDLS+SR      WGI +P DP + +YVW DALTNYLT 
Sbjct: 180 PEFILPDFRKNEVVSFVKQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLTA 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +    +  +FWPAD+H++GKDILRFHA+YWPAFL+SA L + KKVF+HG+   +G 
Sbjct: 240 VGYPE----NLNEFWPADVHIVGKDILRFHAVYWPAFLMSARLEISKKVFAHGWWTVEGH 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP +  +E GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GNL
Sbjct: 296 KMSKSLGNVVDPFKAADEFGVDKLRYFLLREVPFGLDGDFSKSAVINRINSDLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SRS++MI K  +G I  P  F E +E   +V S+ L+  +  +Q     ++L +V   +
Sbjct: 356 ISRSLTMIHKFQNGKIEKPSVFKEIEEEYKNVYSKTLENYKNFIQKLEFSKSLEEVWQFI 415

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +++Y    +PW+L K + +   T LY  V+ I  +  +L  F+P+   +   +L + +
Sbjct: 416 DWLNKYIVKVEPWKLNKEDKEYLKTTLYTVVDGIYAVVWMLNPFMPQKMAEALSMLNINE 475

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             +  +     ++    +++   P+FPR
Sbjct: 476 IKKDIKPYSFPVE--ITINQVV-PLFPR 500


>gi|168486199|ref|ZP_02710707.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570793|gb|EDT91321.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 665

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 203/522 (38%), Positives = 311/522 (59%), Gaps = 14/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+   YI+T I YP+ + HIG AY  I  DVLAR+ RL G  V + TG DEHGQKI +
Sbjct: 1   MSEK-NFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGYYVFYLTGLDEHGQKIQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY
Sbjct: 60  KAEEAGITPQTYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIY 119

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +    EV++   G          + V+W+ EE YF RLS YQD
Sbjct: 120 LGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQD 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L+ ++++HPEFI P  R NE++    + GL+DL++SR TF WG+ +P +P++++YVWID
Sbjct: 180 RLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWID 239

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY  +  G+  KFW     H++GKDILRFH+IYWP  L+  ++ LP ++ +
Sbjct: 240 ALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPDRLIA 299

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D+LRY+L+R +  G DG +  +    R+N 
Sbjct: 300 HGWFVMKDGKMSKSKGNVVYPEMLVERYGLDSLRYYLMRNLPVGSDGTFTPEDYVGRINY 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+VSMI K +DG IP      TE D  +  V  + + +   +M+     
Sbjct: 360 ELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLAEVAEQSIADFHTHMEAVDYP 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V +L+S  ++Y D   PW L K     D+ ++V+      IR +A L++ F+ + 
Sbjct: 420 RALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMSHLAASIRVVAHLIEPFMMET 479

Query: 470 ANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           +  +   L + +E    ++L          +     PIFPR 
Sbjct: 480 SRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFPRL 520


>gi|322389048|ref|ZP_08062615.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144247|gb|EFX39658.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 663

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 198/517 (38%), Positives = 305/517 (58%), Gaps = 11/517 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +HG+ 
Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIAHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+V+MI K Y G +P      T  D  +  V    + E  + M      RAL 
Sbjct: 363 DLGNLLNRTVAMINKYYGGQVPAYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPRALE 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +++S  ++Y D   PW L K   + D+ + V+      +R +A L+Q F+   +N I
Sbjct: 423 AVWNIISRTNKYIDETAPWVLAKEDGDKDQLAAVMAHLAASLRVVAHLIQPFMMNTSNAI 482

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +  +                +     PIFPR 
Sbjct: 483 MEQLGLGLDFDLENLTLAGFPENVTVVAKGTPIFPRL 519


>gi|296445799|ref|ZP_06887751.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256627|gb|EFH03702.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 516

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 252/509 (49%), Positives = 348/509 (68%), Gaps = 9/509 (1%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ISTAI Y N  PHIGHAYE I  D  ARF RLDG DVLF TG DEHGQK+ + A+  G+T
Sbjct: 2   ISTAIPYANGAPHIGHAYERIATDAFARFKRLDGYDVLFVTGMDEHGQKMQRTAEREGLT 61

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   D+ +  F+ M + L+   DD +RTT+ RH  T   +W+++   GDIY   Y GWY
Sbjct: 62  PQQLADRTAAQFQTMGETLNALADDVVRTTQPRHAATVLEIWRRMEAAGDIYLAKYCGWY 121

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           S+RDEAYY++ E+ +  +G+       PV+W+EEE +FF+LSAY D+LL++YE+HP+FI 
Sbjct: 122 SVRDEAYYDESEISE-VEGKKLAPTGTPVEWVEEESWFFKLSAYADRLLAHYEAHPDFIT 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGY 244
           P + +NE+++FVK GL DLS+SR TFDWGI +P+ P+    ++MYVW+DALTNY+T TG+
Sbjct: 181 PDKYKNEIVAFVKRGLSDLSISRTTFDWGIPVPEKPETNAKHVMYVWVDALTNYITATGF 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L      + +FWPA+ HVIGKDI RFHAIYWPAFL+SA  PLPK++  HGF+  +GEK+S
Sbjct: 241 LTGEG-DRTRFWPANAHVIGKDITRFHAIYWPAFLMSAGAPLPKQIVVHGFLFSRGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DPI++    GVD LRYF +REI  G+DG Y  + +  R+NADLAN +GNL  R
Sbjct: 300 KSLGNVVDPIDLATRYGVDQLRYFFLREIPFGQDGNYSHEAIVNRINADLANDLGNLAQR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S+SMI K+  G +P+PG  TE+D ++L+  +  L++ R  +     H ALA++  +V + 
Sbjct: 360 SLSMIAKNCGGKVPSPGELTEADRALLAEAAAALEKARAAIDAYAPHLALAEIFGVVGDA 419

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +RYF  ++PW  KKT+P R  T+LYVT E +R+LAI LQ F+P  A  + ++L VA+  R
Sbjct: 420 NRYFAGEEPWTKKKTDPKRMETILYVTAEALRRLAIPLQPFIPSAAASLLNLLGVAESAR 479

Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRFL 511
            F S  +   L  G  L     P+FPR++
Sbjct: 480 GFASAGETHALVSGAPLPAPA-PVFPRYV 507


>gi|139438655|ref|ZP_01772139.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
 gi|133775735|gb|EBA39555.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
          Length = 533

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 210/530 (39%), Positives = 307/530 (57%), Gaps = 21/530 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   +I+T I Y NA PH+G AY  IIADV AR+ R  G +V F TG DEHG+K+A+A
Sbjct: 3   QSKPSFFITTPIYYVNADPHLGTAYSTIIADVQARYRRSAGYNVKFLTGMDEHGEKVAEA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T + + D  + +F+++ + L+IS DDFIRTTE R H   + LW+++ + G +YK
Sbjct: 63  AAKHNMTPQEWTDSQAPHFKELWNKLEISNDDFIRTTEPRQHHAVQYLWERMKESGYLYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWY + DE Y+ D +V KG +             H P++ ++EE YFF+LSA+QDK
Sbjct: 123 GSYDGWYCVPDETYFTDTQVQKGDEEYGSVGQHLCPDCHRPLERVQEESYFFKLSAFQDK 182

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  Y+ HP+F+ P  R NEV SFV+ GL DLS+SR +FDWGI++P D  ++ YVW DAL
Sbjct: 183 LLKLYDEHPDFVEPAFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDEGHVTYVWFDAL 242

Query: 236 TNYLTTTGYLDNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            NY+T  GY  + D ++A+    WPA  H++GKDI+RFH + WPA L++    LP+ VF+
Sbjct: 243 LNYMTAVGYGVDTDEARAELSYRWPAQFHIVGKDIIRFHCVIWPAMLMAIGEALPEHVFA 302

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           HGF+        K EK+SKS GN I P +VI+ +GV+  RY+ + ++  G DG    D +
Sbjct: 303 HGFLTVRNAETGKAEKMSKSRGNAIAPQDVIDMLGVEGYRYYFMTDVVPGTDGAISFDRM 362

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENM 405
           ++  NADLAN  GNL+SRS++M  K +DG  P  P +F   D  +  +   +++     M
Sbjct: 363 EQVYNADLANSWGNLISRSLNMSAKYFDGCAPAKPASFDAFDNPLAKIADGLVERYMAKM 422

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQ 463
                  A  +V+ L+   + Y +  +PW L K     D  + V+Y  +E IR  A LL 
Sbjct: 423 DVLDYGGAKDEVMELIHAANHYIEDSEPWALAKDEAKADELAFVIYNLLEAIRIAAHLLM 482

Query: 464 AFVPKLANKIFDILFVADENRCFQS---LDQRLKPGFMLHKTFDPIFPRF 510
             +P+ + +    L   DE             L  G    +  DP+FPR 
Sbjct: 483 PLMPQTSAEALRRLSCEDEAASDDLKGICAWGLLAGGQPVEKGDPLFPRL 532


>gi|329115819|ref|ZP_08244536.1| methionine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906224|gb|EGE53138.1| methionine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 668

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 196/521 (37%), Positives = 311/521 (59%), Gaps = 11/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I YP+ + HIG AY  I  DVLAR+ RL   +V + TG DEHGQKI  
Sbjct: 1   MTDKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMNHEVFYLTGLDEHGQKIQT 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  +   +++  +LDISYD FIRTT+  H +    +++K+  + DIY
Sbjct: 61  KAEEAGITPQAYVDGMAEGVKELWSLLDISYDKFIRTTDSYHEEVVAAVFEKLLAQDDIY 120

Query: 121 KGCYSGWYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQD 174
            G YSGWYS+ DE ++ +   +EV++   G          + V+W+ EE YF RL  Y D
Sbjct: 121 LGQYSGWYSVSDEEFFTESQLEEVFRDESGNVTGGIAPSGHEVEWVSEESYFLRLGKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L++++  HPEFI P  R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVWID
Sbjct: 181 RLVAFFNEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSNPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++PLP+++ +
Sbjct: 241 ALLNYATALGYGQENHANFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDMPLPERLIA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LAN +GNL++R+++MI K + G +P+     TE D  +  +    + +  + M      
Sbjct: 361 ELANDLGNLLNRTIAMINKYFGGQVPSYVENVTEFDLDLAYLVEEKIADYHKQMDAVDYP 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
           RAL  V S++S  ++Y D   PW L K + D+   ++V+      +R +A L+Q F+ + 
Sbjct: 421 RALDAVWSIISRANKYIDETAPWVLAKEDGDKEQLASVMAHLAASLRVVAHLIQPFMIET 480

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +N I   L ++ +          +     +     PIFPR 
Sbjct: 481 SNAIMTQLGLSIDFDLENLTLANMPENIQVITKGQPIFPRL 521


>gi|296876924|ref|ZP_06900969.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432055|gb|EFH17857.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 663

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 197/517 (38%), Positives = 304/517 (58%), Gaps = 11/517 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EVY+  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY  +   +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +HG+ 
Sbjct: 243 YVTALGYGQDDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIAHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARNNYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+V+MI K + G +P      T  D  +  V    + E  + M      RAL 
Sbjct: 363 DLGNLLNRTVAMINKYFGGQVPAYVENVTAFDADLAKVVEESIAEYHKQMNAVDYPRALE 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +++S  ++Y D   PW L K + D+     V+      +R +A L+Q F+   +N I
Sbjct: 423 AVWNIISRTNKYIDETAPWVLAKEDGDKEQLVAVMAHLAASLRVVAHLIQPFMMNTSNAI 482

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +  +                +     PIFPR 
Sbjct: 483 MEQLGLDLDFDLENLTLAGFPENVTVVAKGTPIFPRL 519


>gi|239980679|ref|ZP_04703203.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452539|ref|ZP_06591929.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355488|gb|EFE82390.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 538

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 197/523 (37%), Positives = 303/523 (57%), Gaps = 19/523 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A  
Sbjct: 12  KAFYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTADA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GV+ + + D+  +  ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG 
Sbjct: 72  NGVSPQEWCDKLVTEAWKPLWEHLEIANDDFIRTTEKRHTDRVQEFVQDLWDKGEIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    E+  G               PV+ ++EE YFF+LS Y  +LL +
Sbjct: 132 YEGPYCVGCEEYKLPGELLDGEGDFAGEKLCPVHKKPVEILKEENYFFKLSEYAQRLLDF 191

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE++P FI P   RNEV++FV+ GL DLS+SR TFDWG+K+P D ++++YVW+DAL NY 
Sbjct: 192 YEANPGFIQPESARNEVLNFVRQGLTDLSISRSTFDWGVKVPWDDKHVIYVWVDALLNYA 251

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  +     A  +PAD+H++GKDILRFHA+ WPA L++  LPLP +V ++G++L  
Sbjct: 252 TAAGYGADQARFDA-TFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGRVVANGWLLVG 310

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS    I P ++    GVDA R++ +R I+ G+DG +  +    R  ++LAN  G
Sbjct: 311 GEKMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISFGQDGSFSWEDFSARYTSELANDYG 370

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
           NL SR  +M+ K + G +P   A  E+++++    ++ +      + +       +  + 
Sbjct: 371 NLASRVAAMVNKYFGGELPAATASGEAEKAVQEGLAKAVATADRAIGEELDFQSGILAIF 430

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V +V+ Y   Q+PW++ K + +    R +T+LY   E +R +A+LL   +P  + K++
Sbjct: 431 DFVKQVNGYITEQEPWKVAKDDSEEGRARLATILYTAAESLRAMAVLLNPVMPDTSQKLW 490

Query: 475 DILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D L        +A +     +   RL  G  + K    +FPR 
Sbjct: 491 DSLGAEPHLGPLAAQRIDETADWGRLPAGATVTK-GAVLFPRL 532


>gi|86609674|ref|YP_478436.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558216|gb|ABD03173.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 518

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 210/515 (40%), Positives = 303/515 (58%), Gaps = 13/515 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T I Y NA PHIG AY  ++AD +AR+HRL G DVL  TGTDEHGQKI + A+  
Sbjct: 5   TFVITTPIYYVNAAPHIGSAYTTLVADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEER 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +   D+ +  F  +  +LDI YD FIRTT  RH    R  ++++ D+GDI+ G   
Sbjct: 65  GIPPQQHCDEIAAQFAQLWQLLDIRYDRFIRTTNPRHKAIVREFFQRVWDQGDIFIGRQQ 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E+ +G  G         V+W +EE YFFRLS YQ+KL + Y  HPE
Sbjct: 125 GWYCVACEEFKDEAELLEG--GFCPLHPTKKVEWKDEENYFFRLSRYQEKLEALYAEHPE 182

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P  RRNEVI+FVK GL+D S+SR +  WGI  P DP   +YVW DAL NY++     
Sbjct: 183 FIQPESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPGQTLYVWFDALINYISAALDP 242

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   +  ++WPAD+H++GKDI+RFHAIYWPA L+SA LPLPK+VF HGF+   G K
Sbjct: 243 DDEPTLANALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAGLPLPKQVFGHGFLTKDGLK 302

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN +DP E++++ G DA+RY+ + EI  GKDG + +      +NADLAN +GNL+
Sbjct: 303 MSKSLGNTVDPFELVQQYGADAVRYYFLTEIELGKDGDFSEGRFVDVLNADLANDLGNLL 362

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M+ K Y      P     +D  + ++  R+   + +  +      A  + +SL  
Sbjct: 363 NRTLNMLRK-YQSDYRVPAVGIPADHPLKTLAERLAPAVADAYERLDPSSAARKALSLAQ 421

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y D Q PW L K    +R + +LY  +E +R +A+LL   +P L+ KI   L  + 
Sbjct: 422 ASNKYLDEQAPWTLHKQGQNERVAQILYAVLESVRWVAVLLSPLIPALSLKILQQLGFSL 481

Query: 482 EN-----RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            +         +   +L PG    +   P+F + L
Sbjct: 482 ADTLQLRWDPDATWGQLPPG-QEPQPPTPVFQKIL 515


>gi|229587041|ref|YP_002845542.1| methionyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|228022091|gb|ACP53799.1| Methionyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 508

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 250/510 (49%), Positives = 348/510 (68%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T + Y N  PHIGHAY  + +DV+ARF RL G DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPVYYVNDIPHIGHAYTSVASDVIARFMRLRGFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA++++ E+ +            PV+W++E  YFF LS +QDKLL +YE+HP+
Sbjct: 124 GWYAVRDEAFFDESELTRD----GLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEAHPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPADLHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 LDEQSNYNKFWPADLHVVGKDILRFHAVYWPAFLMAAEVPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            S + K+ D  +P  T G   +  E  IL   S+ +++    M    I++ L  +I+L  
Sbjct: 359 TSFVYKNNDAKVPLLTQGVIDKIYELPILKTASKFVEQNILLMDKTEINKILENIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPDKTLEVLYALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKE 478

Query: 483 NRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            R F+ L  D  L  G  + +    IFP+F
Sbjct: 479 ERLFKHLIRDYTLTAGSNILEP-TIIFPKF 507


>gi|120602218|ref|YP_966618.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120562447|gb|ABM28191.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 663

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 201/518 (38%), Positives = 296/518 (57%), Gaps = 24/518 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ Y++T I Y NA+PH+GHAY  I+AD + RF RL G D  F TGTDEHG KI +AA+ 
Sbjct: 2   DRFYVTTPIYYVNAKPHLGHAYTTIVADSMRRFQRLLGKDTYFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ K FVD  S  FRD+   L + YD FIRTT+  H    +   +++ D GDIY G Y
Sbjct: 62  AGVSPKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDNGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    +G     Q  P +++ E+ YFFR+S YQ  L  +   +P
Sbjct: 122 GGHYCYGCERFYTEKELE---NGLCPQHQVKP-EYIAEKNYFFRMSKYQGWLKQHILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S + SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D      A +WP   H++ KDIL+ HA++WP  L +A L     +  HG+ L +  
Sbjct: 238 LGWPDGDR--FANYWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRDT 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P+E+I+  G++A RYFL+RE+  G D  + ++ L  R+NADLAN +GNL
Sbjct: 296 KMSKSLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR +SM  K + G++P PGA+TE DE++ ++     +             AL  +  LV
Sbjct: 356 YSRVLSMTAKYFGGVVPAPGAYTEEDETLRALAVEAQRNFCNLFGRVRFSNALESLWELV 415

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             +++Y D+  PW L K  +  R  TV+Y  +E +R++A+ L   +P+ A  +   L   
Sbjct: 416 RALNKYVDSAAPWTLFKQGDTKRLGTVMYTLLESMRKVAVHLLPVMPEAATSMLAQLGLE 475

Query: 479 -------VADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                  + +E   +      L+PG  +      +FPR
Sbjct: 476 VNVDAVDLGNEAETW----GGLQPGTTV-AGASNLFPR 508


>gi|158604929|gb|ABW74748.1| methionyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 644

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 220/511 (43%), Positives = 316/511 (61%), Gaps = 10/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK YI+T I Y N  PHIGHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+
Sbjct: 2   KEKAYITTPIYYVNDVPHIGHAYTTIIADTLARFNRLQGKETYFMTGTDEHGQKIEQAAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T K + D+ S  FR + D  +ISYD FIRTT++ H  T + +++K+   GDIYKG 
Sbjct: 62  ARGKTPKEYADEISAKFRSLWDEFEISYDHFIRTTDEEHKQTVQNVFEKMQVNGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y +  E ++N  ++    +             ++EE YFF+LS Y+D LL +YE+ 
Sbjct: 122 YEGFYCVSCETFFNQRDL---LEDNRCPDCGRVTSLVKEESYFFKLSKYEDALLKWYEND 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240
              ++P  ++NEV+SFVK GLKDLS++R +FDWGIK+P   +D +++MYVW+DAL NYLT
Sbjct: 179 ELCVIPKGKKNEVVSFVKGGLKDLSVTRTSFDWGIKLPKSANDDKHVMYVWLDALINYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           T GY  + D ++  FWP   H++GKDILRFHA+YWPAFL+S  LPLPK V +HG+    G
Sbjct: 239 TLGY--SRDNARMDFWPHTTHIVGKDILRFHAVYWPAFLMSLGLPLPKHVAAHGWWTIDG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNVI+P EV    G++  RYFL+RE+  G+DG Y +  L +R+N++L NG+GN
Sbjct: 297 EKMSKSKGNVINPREVANAYGLENFRYFLLREVPFGQDGDYSQKALIERINSELGNGLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR V M  K  D  I +     +  ++ L      L E  +N++N   +R L  +  +
Sbjct: 357 LLSRIVGMSAKYSDYKIDSKDVI-KFHKAELDEAKGYLDEAIKNLENLATNRYLEDLWKV 415

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V+  +      +PW L K    D A+ ++ +   ++ ++AILL   +PK   KI D L  
Sbjct: 416 VTLANAAVAKYEPWSLVKAGKSDEANALVALCANLLAKVAILLSPAMPKTCAKIADTLGF 475

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +   ++SL  + +      K   P+FPR 
Sbjct: 476 SIDTASYESLVLKNEISNFTAKATGPLFPRI 506


>gi|326387756|ref|ZP_08209362.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207802|gb|EGD58613.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 541

 Score =  426 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 243/518 (46%), Positives = 328/518 (63%), Gaps = 14/518 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  YI+TAI+YPN +PHIGHAYE I ADV+ RF R  G D    TGTDEHG K+A+ A++
Sbjct: 14  EPYYITTAISYPNGKPHIGHAYEAIAADVIVRFMRAMGRDARLQTGTDEHGLKMAQKARD 73

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K   DQ S+ F+DM   L++ YD FIRTTE RHH+  + LW+++   GD+Y   Y
Sbjct: 74  LGLTAKELADQMSQYFKDMCAALNVGYDVFIRTTEDRHHEASQELWRRMKANGDLYLDRY 133

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEAYY++ E+  G  GQ  + Q  PV+W  EE +FFRLSAY DKLL+ Y  +P
Sbjct: 134 EGWYSIRDEAYYDESELVAGEGGQKLSPQGTPVEWTVEESWFFRLSAYGDKLLTLYNENP 193

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYIMYVWIDALTNY 238
           EFI P  RRNE++ FV+ GL+DLS+SR +FDWGIK+P          ++MYVW+DALTNY
Sbjct: 194 EFIRPESRRNEIMRFVEGGLRDLSVSRTSFDWGIKVPVHGEGETSDDHVMYVWVDALTNY 253

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  G+ +  +    KFWPA+LH+IGKDI+RFH +YWPAFL+SA LP+P++VF HGF+L+
Sbjct: 254 LTGLGWPEETE-EFRKFWPANLHLIGKDIIRFHTVYWPAFLMSAGLPVPRQVFGHGFLLN 312

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G+K SKSLGNV DP+++    GVD LRYF +RE+  G+DG Y  + +  R NA+LAN  
Sbjct: 313 RGQKESKSLGNVTDPLDLAARFGVDPLRYFFLREVVFGQDGSYSPEAIATRCNAELANSY 372

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV R++SMI K+  G + T  +    +  + +V +   +++    +       L   +
Sbjct: 373 GNLVQRTLSMIFKNCGGELATFSSTEADEALLATVAAATREDLPREFEALNFSAGLEAWM 432

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V   + Y D Q PW L+KT+P+R   VLY     IR L I +Q  VP  A K+ D L 
Sbjct: 433 RAVFACNAYVDEQAPWALRKTDPERMRAVLYTLFMAIRDLTIAIQPVVPATAAKVLDQLG 492

Query: 479 VADENRCFQSL------DQRLKPGFMLHKTFDPIFPRF 510
           V ++ R    L        R+  G  L     P FPR 
Sbjct: 493 VPEDQRGIADLPRADWYMARVATGERLAAPV-PAFPRI 529


>gi|312867085|ref|ZP_07727295.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097214|gb|EFQ55448.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 663

 Score =  426 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 196/517 (37%), Positives = 305/517 (58%), Gaps = 11/517 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+ +P +P++++YVWIDAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVPVPSNPKHVVYVWIDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++ +HG+ 
Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDVKLPERLIAHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+V+MI K + G +P      T  D  +  V    + E  + M      RAL 
Sbjct: 363 DLGNLLNRTVAMINKYFVGQVPAYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPRALE 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +N I
Sbjct: 423 AVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLIQPFMMNTSNAI 482

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +  +                +     PIFPR 
Sbjct: 483 MEQLGLGLDFDLENLTLAGFPENVTVVAKGTPIFPRL 519


>gi|332185017|ref|ZP_08386766.1| methionyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014741|gb|EGI56797.1| methionyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 518

 Score =  426 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 246/510 (48%), Positives = 332/510 (65%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI YPN +PHIGHAYEM+ ADV+ARF R  G DVLF TGTDEHG K+A+AA+ 
Sbjct: 3   DPFYITTAIHYPNGRPHIGHAYEMVAADVIARFQRQAGRDVLFQTGTDEHGLKMAQAARA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++T+ F D+ S  F  MAD LDISYD FIRT +  H+   + +WK +  KGD+Y   Y
Sbjct: 63  RGISTREFADEMSSYFHVMADRLDISYDRFIRTVDADHYAASQAIWKAMQAKGDLYLDRY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+RDEA+Y++ E+  G DG   + Q  PV+W  EE +FFRLS YQ  LL  Y  +P
Sbjct: 123 EGWYSVRDEAFYDEAELTLGEDGTKLSPQGTPVEWTAEETWFFRLSKYQQPLLDLYRDNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  RRNEV+ FV+ GL DLS+SR +FDWG+ +PD P ++MYVW+DALTNYLT TGY
Sbjct: 183 DFIRPESRRNEVMRFVEGGLSDLSVSRTSFDWGVPVPDSPGHVMYVWVDALTNYLTGTGY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N D   A+FWPA+LH+IGKDI+RFH +YWPAFL+SA+LPLP+ VF HGF+LH+GEK+S
Sbjct: 243 -PNKDSELARFWPANLHLIGKDIVRFHTVYWPAFLMSADLPLPQSVFGHGFLLHRGEKMS 301

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DP+ + +  GVDALRYF +RE++ G+DG Y  + +  RVNA+LAN  GNL  R
Sbjct: 302 KSVGNVVDPMGLADAFGVDALRYFFLREVSFGQDGSYSAEAIVTRVNAELANSFGNLAQR 361

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S I K+  G +P  G    +D  ++         ++    + ++ + +   +  V   
Sbjct: 362 TLSFIAKNLGGALPEAGRSDPTDAMLIEEVVVACAGLKTAFDDLMLSQGIEAWMRGVYAC 421

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++Y D Q PW L+KT+P+R   VL   V  IR LAI +    P+ A ++ D L   + + 
Sbjct: 422 NQYIDVQAPWSLRKTDPERMHAVLGTLVRAIRMLAIAILPVTPRGAGQVLDTLGAEERDH 481

Query: 485 CFQSLDQ----RLKPGFMLHKTFDPIFPRF 510
                D     R   G  L     P FPR 
Sbjct: 482 AAIDDDGWYARRAATGVPL-SPPTPAFPRL 510


>gi|329121037|ref|ZP_08249668.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471199|gb|EGF16653.1| methionine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 634

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 214/519 (41%), Positives = 318/519 (61%), Gaps = 14/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+A+ HIGH Y   +AD +ARF RLDG DV F  G+DEHGQKI +
Sbjct: 1   MSEKQAFYITTPIYYPSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AGVT   +VD+  + F+ +   L+IS DDFIRTTE+RH    + L+ K  DKGDIY
Sbjct: 61  KATEAGVTPIEYVDKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFHKAYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY +  E ++ + ++    +G          + + EE YFF++S Y D+ L + 
Sbjct: 121 KGKYEGWYCVPCETFWPESKL---LEGNLCADCKRECKRVSEEAYFFKMSKYADRWLKFI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P FI P  RRNE+I FVK+GL+DL +SR +F WGI +P DP++++YVW DALTNYLT
Sbjct: 178 EENPHFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G + +      K+WPAD+H++GK+I+RFH I WP  L+S ++ +PK+V+ HG+++ +G
Sbjct: 238 AVG-IKDDKEKFKKYWPADVHLVGKEIVRFHTIIWPIMLMSLDIEIPKQVYGHGWLVVEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DPI +I E G DA+RY+L+ +I  G DG + +D L  R+N+DL+N +GN
Sbjct: 297 EKMSKSKGNVVDPIPLIHEFGSDAIRYYLMNDIQLGSDGNFGRDRLINRINSDLSNDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           L+ R++SM+ K  +G++            ++  +I +    VL+  +  M N  I+ AL 
Sbjct: 357 LLYRTLSMVEKYRNGIVYKGDITGDKVIEDASLNIENDLINVLENYKYGMNNWKINDALK 416

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V + V  +++Y D   PW L K     D    VLY   E +R ++I +   +P  A K+
Sbjct: 417 SVWTYVRSLNKYIDITMPWTLAKDESKKDLLDAVLYHLCEGLRVVSIFVSPVIPIAAEKM 476

Query: 474 FDILFVADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
           ++ L + D      S     + +    ++K   PIFPR 
Sbjct: 477 WNQLGLKDFKSVQLSDVTWGKFEENTKINKGL-PIFPRI 514


>gi|117927385|ref|YP_871936.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647848|gb|ABK51950.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 539

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 210/525 (40%), Positives = 306/525 (58%), Gaps = 20/525 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGHAY  + ADVLAR+HR  G  V F TGTDEHGQK+ ++AQ 
Sbjct: 3   KTFYVTTPIYYVNDAPHIGHAYTTVAADVLARWHRQRGEPVWFLTGTDEHGQKVLRSAQA 62

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G + + + D+  +  ++     LDISYDDFIRTTE RH    +   +++ +KG+IY+G 
Sbjct: 63  GGASPQEWADRLVAEAWQPTWRELDISYDDFIRTTEPRHTGRVQAFLQRLYEKGEIYEGV 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E +    E+  G               PV  + E  YFFRLS Y D LL +
Sbjct: 123 YEGPYCVACEEFKLPGELVSGEGEYAGQQVCPVHRRPVDQLSETNYFFRLSKYADALLDH 182

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y +HPE + P   RNEV+ F++ GL+DLS+SR +FDWG+KIP D + ++YVW DAL NY+
Sbjct: 183 YAAHPEAVEPESARNEVMQFIRQGLQDLSISRSSFDWGVKIPWDDRQVVYVWFDALLNYI 242

Query: 240 TTTGYL---DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           T  GY    +      A  WPAD+H++GKDILRFHA+ WPA LL+  LPLP+KVF+HG++
Sbjct: 243 TAIGYDAPDETMRARFASTWPADVHLVGKDILRFHAVIWPAMLLAGGLPLPRKVFAHGWL 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  GEK+SK+    I P ++    G DA RY+ +R    G+D  +  + +  R  A+LAN
Sbjct: 303 LVSGEKMSKTRLTGIAPTQLTAHFGSDAFRYYFLRSFPFGQDASFSWEEMSARYTAELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G+GNL SR  +M  + +DG++P PG  T +++ +  V + V+ +    M       ALA+
Sbjct: 363 GLGNLASRVTAMTGRYFDGVLPVPGEVTAAEQRVADVLAAVVPDADAAMDRLDFFTALAR 422

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +  LV  ++ Y   Q+PW+L K +      R +TVLY   + +R LA+LL A +P+  ++
Sbjct: 423 IWDLVLVLNGYLTEQQPWQLAKQDDGEARIRLATVLYTAADGLRALAVLLNAVMPRACSR 482

Query: 473 IFDILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +++ L        +  +     +    L  G  L K  DP+FPR 
Sbjct: 483 LWEQLGAEATLGPLGSQRISDTARFGVLPAGSRLTKR-DPLFPRL 526


>gi|212696056|ref|ZP_03304184.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676965|gb|EEB36572.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 645

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 208/512 (40%), Positives = 312/512 (60%), Gaps = 12/512 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI  AA
Sbjct: 2   DKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G   + FVD+ +   +D+   LDI YD FIR+T+ +H +  + +++ + DKGDIYKG
Sbjct: 62  LSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E+Y+ + ++ +G            V   +EE YFF+LS Y DKL   ++ 
Sbjct: 122 EYDGYYCESCESYFTESQLDEGN----CPDCGRAVDHHKEESYFFKLSKYTDKLKELFKD 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEF+ P  R+NE+++     GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT 
Sbjct: 178 HPEFLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + +    K+WPA +H+IGKDI+RFH I WPA L++ ++PLP+KVF+HG+IL   +
Sbjct: 238 IGYGHDME-KFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDND 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++ P  ++E  G DAL+YFL+RE   G DG +       R N+DL N +GNL
Sbjct: 297 KMSKSKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+VSMI K  DG+I       E DE ++++C +   +  + M +   + AL  + +LV
Sbjct: 357 LSRTVSMISKYNDGIIKKGSETDEYDEDLINLCHKTYDDFTKLMDDFKFNEALECLWNLV 416

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              ++Y D  +PW L +    +R +TVLY   E +R +A +L+  +     +I   L + 
Sbjct: 417 RRSNKYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGL- 475

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            EN+ F S  +   +K G  ++K    +F R 
Sbjct: 476 -ENKGFASAKEFGLIKEGTKVNK-GQNLFNRL 505


>gi|281356569|ref|ZP_06243060.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316696|gb|EFB00719.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 646

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 188/514 (36%), Positives = 287/514 (55%), Gaps = 13/514 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N +PHIGHAY  I+ADVLAR++R   +D  F TGTDEHGQK+ KAA  
Sbjct: 4   DNFYVTTPIYYVNDKPHIGHAYTTILADVLARYYRSLNVDTFFLTGTDEHGQKVEKAAAK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+    F+++   L I+ D FIRTT++ H +  R + +++ D+ +IYK  Y
Sbjct: 64  RGVSPKQQADETVVRFQELWKRLGITNDRFIRTTDEYHKEVVREILQELYDRDEIYKAEY 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY +  E +Y + ++ +G            V  + E  YFFR+S YQ  L+ Y ++HP
Sbjct: 124 TGWYCVGCERFYTEKDLVEGK----CPECGREVSAIRESNYFFRMSKYQQWLIDYIQTHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P  R NE + F+K  L DL +SR      WGI++P D  Y+ YVW DAL NY++  
Sbjct: 180 DFIQPAFRANETLGFLKRELGDLCISRPKSRLSWGIELPFDADYVCYVWFDALINYISAV 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY         K+WPA  H+IGKDIL  H++YWP  L +  LP+P+ +F+HG+ L    K
Sbjct: 240 GY-RRNQAEFEKWWPASYHLIGKDILTTHSVYWPTMLKAIGLPMPRTIFAHGWWLTGNTK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P+++IE+ GVDA RYFL+ E++ G D  + ++    R N+DLAN +GNL+
Sbjct: 299 MSKSLGNVVNPMDMIEKCGVDAFRYFLLSEMSPGNDANFSEESFVARYNSDLANDLGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR + M L+    + P P      D  +       +  +  +++     + L  V++ V 
Sbjct: 359 SRVLKMTLRSGGVIQP-PAELNADDLELNREVETAIAAMETSLKAMKFDQGLNAVMNAVR 417

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +RY +   PW L K     R +TVLY   + +R++++LL   +P    ++   L  + 
Sbjct: 418 AGNRYLEKTAPWALAKKGEVARLNTVLYTAADALRRISVLLAPVMPDKMAELRACLGYSG 477

Query: 482 ENRCFQSLDQRLKP----GFMLHKTFDPIFPRFL 511
           E      +   L           +    +FPR L
Sbjct: 478 EELTNARISDLLSSRSDLAGRTVRDSAGLFPRIL 511


>gi|302552805|ref|ZP_07305147.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470423|gb|EFL33516.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 538

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 201/523 (38%), Positives = 307/523 (58%), Gaps = 19/523 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+ 
Sbjct: 12  KAYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GV+ + + D+  +  ++ + + L+I+ DDFIRTT+KRH D  +   + + DKG+IYKG 
Sbjct: 72  NGVSPQEWADKLVTEAWKPLWEHLEIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    E+  G               PV+ + EE YFF+LS Y DKLL++
Sbjct: 132 YEGPYCVGCEEYKLPGELLDGEGEYAGQKLCPIHKKPVEILSEENYFFKLSEYGDKLLAH 191

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE++P FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY 
Sbjct: 192 YEANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDAKHVIYVWVDALLNYA 251

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY +N      + +PAD+H++GKDILRFHA+ WPA L++  LPLP K+ ++G+++  
Sbjct: 252 TAVGYNENQA-KFEETFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKIAANGWLMVG 310

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  G
Sbjct: 311 GEKMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYG 370

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
           NL SR  +M+ K + G +P   A  E++++I    ++ + E    +  +      +  + 
Sbjct: 371 NLASRVAAMVGKYFGGELPESTADGEAEKAIHEGLAKAVAEADRRIGDDLDFQGGILAIF 430

Query: 419 SLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V +V+ Y   Q+PW++ K        R +T+LY   E +R +A+LL   +P+ + K++
Sbjct: 431 DFVKQVNGYITEQEPWKVAKDTSEEGKARLATILYTAAESLRAIAVLLNPVMPETSQKLW 490

Query: 475 DILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D L        +AD+     +   RL  G  + K    +FPR 
Sbjct: 491 DSLGAEASLGALADQTVQQSAEWGRLPAGTTVTK-GAVLFPRL 532


>gi|302328190|gb|ADL27391.1| methionine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 693

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 188/515 (36%), Positives = 308/515 (59%), Gaps = 10/515 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  Y++T I Y N  PHIGH+Y  ++AD+L RFH++ G    F TGTDEHGQK+ +
Sbjct: 1   MCDMKNFYVTTPIYYVNDAPHIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKVQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA    VT +  VD+    F D+   ++I  D FIRTT   H    +   +K+ DKG+IY
Sbjct: 61  AAAKRNVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y GWYS+ +E ++++DE+    + +     H PV+W++E+ YFF++SAYQ KL+ Y 
Sbjct: 121 SKEYEGWYSVGEERFFSEDEL---DENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYL 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY 238
           ESH ++I+P  R NE+  F++  L DL +SR      WGI +P DP Y+ YVW DAL NY
Sbjct: 178 ESHKDWIVPDYRWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVWFDALLNY 237

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++ +             WPA  H+IGKDIL  H++YWP  L++ ++PLP+ + +HG+ L 
Sbjct: 238 VSASTAFHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLV 297

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNV++P++ +E+ G+DA RYFL RE+  G+D  +  +G  +R+N+DLAN 
Sbjct: 298 NGGEKMSKSAGNVVNPMDYMEKYGIDAFRYFLAREMVVGQDANFTHEGFVRRINSDLAND 357

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GN+++R   ++L ++ G++P P A  ++   ++++ +RV   + E +    + + + ++
Sbjct: 358 LGNVLNRVHRLVLTNFGGVLPAPNALDDAANEVITIANRVRTNVMEWVPQVKLSQVVEEI 417

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++LV  ++RY + + PW+L K     D  +TVLY++ E +R    +L   +P  + +   
Sbjct: 418 MTLVRSINRYLEIKAPWKLAKDESKKDELATVLYISAEAVRLSLSMLWPVIPGKSEEGLA 477

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++  +        +   LK G    +   P+FPR 
Sbjct: 478 MIG-SKFTDQNDLVWGILKGGEKFGE-GKPLFPRI 510


>gi|295111687|emb|CBL28437.1| methionyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 650

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 195/512 (38%), Positives = 291/512 (56%), Gaps = 9/512 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    YI+T I Y N  PHIGHAY  I  D ++R+ R+ G DV F TGTDEHGQK+  AA
Sbjct: 5   DERIFYITTPIYYVNDVPHIGHAYTTIACDAMSRYKRMKGCDVRFLTGTDEHGQKVQAAA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GV  +  VD+   NF+++  VL++S DDFIRTTE RH    + ++K++ D+GDIYKG
Sbjct: 65  EKRGVAPQDLVDRIHLNFKELWRVLNVSNDDFIRTTEPRHVRVVQDMFKRLMDQGDIYKG 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  EAY  +  +     G        P+  M+EE YFFR S Y  +L+ +YE 
Sbjct: 125 EYEGKYCVPCEAYVPESSMGP---GGTCPDCGRPLTVMKEESYFFRGSRYVPQLIEHYEK 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           H + ++P  R NE++SF+K  ++D S+SR T  WGI +P D ++++YVW DAL NY +  
Sbjct: 182 HLKGVMPRIRYNEIMSFLKGEVRDQSVSRTTLKWGIPVPGDEKHVIYVWFDALINYASAI 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +   +  ++WP   HV+GKDI+RFH + WP  LL+  LPLP  + +HG+    GEK
Sbjct: 242 GY-LDDRSTFDRYWPHVRHVVGKDIIRFHCVIWPLMLLALGLPLPVSIVAHGWWTVDGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP  V+EE G+D  RYFL+REI  G DG + +  L  R+N+DLAN +GNL+
Sbjct: 301 MSKSRGNVVDPCRVVEEYGLDPFRYFLLREIPFGHDGDFSEAALVGRINSDLANDLGNLL 360

Query: 363 SRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R++ MI    +G +P            +       L+   E M++     AL ++ S +
Sbjct: 361 NRTLKMIQDYREGTVPAESLREMPEARDLQCQAQAALEGTDEAMEDFSFDEALKRIWSFI 420

Query: 422 SEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +++ D   PW L K    D   +VL    E +R  A+++  F+P+ A +I+  L + 
Sbjct: 421 GRANKFIDETMPWRLAKEGSGDALDSVLLNLYEALRLSALMVAPFMPETAQRIWGQLGLE 480

Query: 481 DENR--CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +     +         G  +    + +FPR 
Sbjct: 481 GDPLKCLYDDFRWGAAAGTRVG-RAEVLFPRI 511


>gi|47092860|ref|ZP_00230643.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018764|gb|EAL09514.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 630

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 216/490 (44%), Positives = 322/490 (65%), Gaps = 13/490 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ RL G DV + TGTDEHGQKI   A+  G++ + +VD+ +  F+++   L+IS  D
Sbjct: 1   MARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND---DEVYKGADGQYY 150
           FIRTT+ RH  +   +++++ ++GDIY G Y GWYS+ DE Y+ +   +EVYK  +G+  
Sbjct: 61  FIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVI 120

Query: 151 NAQH---NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKD 206
             +    N V+ ++EE YFFR+S Y D+L+ YY SHPEFILP  R+NE+I+   K GL+D
Sbjct: 121 GGKAPSGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR TFDWGIK+P +P++++YVWIDAL+NY+T  GY  + D    K+WPAD+ ++GK+
Sbjct: 181 LAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKE 240

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+RFH IYWP  L++ +LPLPK VF HG+IL K  K+SKS GNV+DP  +I+  G+DALR
Sbjct: 241 IVRFHTIYWPIMLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALR 300

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L+RE+  G DG +  +    RVN DLAN +GNL++R+V+MI K +DG IP   G  TE
Sbjct: 301 YYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTE 360

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-- 443
            D++++   + V++E   +M +     AL Q+ SL+S  ++Y D   PW L K    R  
Sbjct: 361 FDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLWSLISRTNKYIDETAPWTLAKDEDKRTE 420

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSL--DQRLKPGFMLH 500
            ++V+    E +R +A+LLQ F+ +   +IF  L + +EN + + S+     +  G  + 
Sbjct: 421 LASVMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEIPAGTTVV 480

Query: 501 KTFDPIFPRF 510
           K   PIFPR 
Sbjct: 481 KKGTPIFPRL 490


>gi|311897996|dbj|BAJ30404.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 534

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 208/519 (40%), Positives = 306/519 (58%), Gaps = 17/519 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N +PH+GHAY  +  DVL R+HR  G DV + TGTDEHGQKI + A+  G
Sbjct: 13  YYVTTPIYYVNDRPHLGHAYTTVAGDVLTRWHRQRGEDVWYLTGTDEHGQKILRTAEANG 72

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + L I+ DDFIRTTE RH D  +   + + DKG+IY+G Y+
Sbjct: 73  VTPQEWCDKLVGEAWKPLWEHLRIANDDFIRTTEARHTDRVQEFVQDLYDKGEIYQGSYT 132

Query: 126 GWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           G Y +  E Y    E+  G   D +       PV+W+EEE YFFRLSAY  KLL +Y ++
Sbjct: 133 GPYCVGCEEYKLPGELLPGTTEDEKLCPVHKRPVEWLEEENYFFRLSAYGPKLLEFYAAN 192

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI P   RNEV+ FV+  LKDLS+SR TFDWG+ +P D ++++YVW+DAL NY+T  G
Sbjct: 193 PDFIQPASARNEVLRFVEQDLKDLSISRSTFDWGVPLPWDAKHVLYVWVDALQNYITAAG 252

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +P+   A+ WPA +H++GKDILRFHA+ WPA L++A LPLP++V ++G+++  GEK+
Sbjct: 253 YGSDPER-FARLWPASVHLVGKDILRFHAVIWPAMLMAAGLPLPRRVVANGWLMVGGEKM 311

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS    I P ++    GVDA RY+ +R I  G DG +  +    R  ++LAN  GNL S
Sbjct: 312 SKSNLTGIAPTDLTSHFGVDAYRYYFLRAIPFGTDGSFSWEDFTARYTSELANDFGNLAS 371

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVS 422
           R  +M+ K +DG +P   A   +++++     +   E    + +       +A V   V 
Sbjct: 372 RVAAMVGKYFDGALPAATAHGPAEQALADALVKATAEADRKIGEELDFAGGIAAVFEFVK 431

Query: 423 EVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V+ Y   Q+PW++ K        R +TVLY   E +R  A+LL   +P  A +++D L 
Sbjct: 432 LVNGYLTEQEPWKVAKDTTAEGQARLATVLYTAAEALRATAVLLNPLMPDSAAELWDSLG 491

Query: 479 -------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                  +AD+     +   RL  G  + K  + +FPR 
Sbjct: 492 AEPALGALADQRIATVADWGRLPAGATVTK-GEILFPRL 529


>gi|116622455|ref|YP_824611.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225617|gb|ABJ84326.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 641

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 209/512 (40%), Positives = 298/512 (58%), Gaps = 26/512 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y++T + Y NA PHIGH Y  + A+ +ARF R+ G D +  TGTDEHGQK+ ++A+ A
Sbjct: 2   KYYLTTPLYYVNAAPHIGHTYTTMAAETIARFKRMQGYDAVMFTGTDEHGQKVERSAEAA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + F D  +R F+   + L+I  D  IRTT+ RHH   + L++   D G IYKG YS
Sbjct: 62  GKTPQEFTDTIAREFQQQWEKLNIRVDRTIRTTDPRHHKVVQRLFQMCMDNGYIYKGSYS 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y + DE Y ND        G          + + EE YFF+LSA+ +KLL  YES P+
Sbjct: 122 GQYCVYDELYANDA-----KPGDPCPICGRITETVTEENYFFKLSAFTEKLLELYESQPD 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFVK GL DLS+SR T  WGI +P +  ++ YVW DAL  Y       
Sbjct: 177 FIQPEARRNEVISFVKQGLNDLSISRTTIKWGIPLPVEGNHVFYVWFDALIGY------- 229

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                     WPADLH++GK+I RFHA++WPAFL++  +PLPK++ +HG++L + +K+SK
Sbjct: 230 -MSAVDGEDLWPADLHLMGKEITRFHAVFWPAFLMAGGVPLPKRIVAHGWLLFENDKMSK 288

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN++    + + +G DALRYFL+REI  G+DG +  D L  R N+DLANG+GNL SR+
Sbjct: 289 SRGNIVRSEPIRQVMGADALRYFLLREIVFGQDGSFSYDALIGRYNSDLANGLGNLASRT 348

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++MI +   G +P       SD  I  + ++ ++ ++E        + L  V  L+S VD
Sbjct: 349 LTMINQYRGGAVPEG-----SDAEIAGIANQTIRTVQETFDRFEFSKGLEAVWGLISAVD 403

Query: 426 RYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++     PW+L + N        ST LY   E +R    LL   +P+ A KI+  L + +
Sbjct: 404 KFIVQNAPWKLARQNDQESQTLLSTTLYTAAEALRVATALLSPVLPQSAPKIWAQLGLPE 463

Query: 482 --ENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
             E   F +L+   L+PG  + +    +FPR 
Sbjct: 464 SIEAVRFATLEWGSLQPGQKIGE-IAGVFPRI 494


>gi|313891833|ref|ZP_07825438.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119827|gb|EFR43014.1| methionine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 634

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 213/519 (41%), Positives = 320/519 (61%), Gaps = 14/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+A+ HIGH Y   +AD +ARF RLDG DV F  G+DEHGQKI +
Sbjct: 1   MSEKQAFYITTPIYYPSAKLHIGHTYCTTVADTVARFKRLDGKDVFFLCGSDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AGVT   +VD+  + F+ +   L+IS DDFIRTTE+RH    + L++K  DKGDIY
Sbjct: 61  KATEAGVTPIEYVDKIVKGFQQLWKELNISNDDFIRTTEERHIKVVQKLFQKAYDKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY +  E ++ + ++    +G          + + EE YFF++S Y D+ L + 
Sbjct: 121 KGKYEGWYCVPCETFWPESKL---LEGNLCADCKRECKRVSEEAYFFKMSKYADRWLKFI 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P FI P  RRNE+I FVK+GL+DL +SR +F WGI +P DP++++YVW DALTNYLT
Sbjct: 178 EENPHFIEPESRRNEMIQFVKNGLEDLCVSRTSFSWGIPVPFDPKHVVYVWFDALTNYLT 237

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G +++      K+WPA++H++GK+I+RFH I WP  L+S ++ +PK+V+ HG+++ +G
Sbjct: 238 AVG-IEDDKEKFKKYWPANVHLVGKEIVRFHTIIWPIMLMSLDIEIPKQVYGHGWLVVEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV+DPI +I E G DA+RY+L+ +I  G DG + +D L  R+N+DL+N +GN
Sbjct: 297 EKMSKSKGNVVDPIPLIHEFGSDAIRYYLMNDIQLGSDGNFGRDRLINRINSDLSNDLGN 356

Query: 361 LVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           L+ R++SM+ K  +G++            ++  +I      VL+  +  M N  I+ AL 
Sbjct: 357 LLYRTLSMVEKYRNGIVYKGDITGDKVIEDASLNIEKDLINVLENYKYGMNNWKINDALK 416

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V + V  +++Y D   PW L K     D    VLY   E +R ++I +   +P  A K+
Sbjct: 417 SVWTYVRSLNKYIDITMPWTLAKDESKKDLLDAVLYHLCEGLRVVSIFVFPVIPIAAEKM 476

Query: 474 FDILFVADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
           ++ L + D      S  +  + +    ++K   PIFPR 
Sbjct: 477 WNQLGLKDFKSVQLSDVIWGKFEENTKINKGL-PIFPRI 514


>gi|91202480|emb|CAJ72119.1| strongly similar to methionyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 520

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 201/510 (39%), Positives = 307/510 (60%), Gaps = 10/510 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+  Y++T I Y N  PHIGH+Y  I ADVLAR+ RL   DV F TG+DEHGQKI KAA
Sbjct: 2   GRQSFYLTTPIYYVNDIPHIGHSYTTIAADVLARYRRLQQYDVFFLTGSDEHGQKIQKAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +    T   FVD     F+D+ + L+IS DDFIRTT++RH    + +++K+ + GDIY G
Sbjct: 62  EACNKTPNDFVDMVVGKFKDLWENLNISNDDFIRTTDERHVKRVKKIFQKLFENGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G Y +  E+++ + ++ +G            V+ ++E+ YFFRLS YQ  L+ +Y+ 
Sbjct: 122 EYEGRYCVPCESFWTETQLDEG----RCPECRRNVEKVKEKNYFFRLSKYQKPLIEHYDK 177

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HPEFI P  RRNE++  + S ++D+S+SR    WGI++P D    +YVWIDAL NY+T  
Sbjct: 178 HPEFIQPESRRNEILQRITSHIEDISISRSAVTWGIQVPMDTTQTIYVWIDALLNYITAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D+      K+WPA++H+IGK+IL FH   WPA L+S  + LP K+F+HG+   +G+K
Sbjct: 238 GY-DDDMELFQKYWPANVHIIGKEILWFHGAIWPAILMSLKIELPFKIFTHGWWTIEGQK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGN IDP+ +I+  G DA RYF++RE+  G DG +    L  R+N+DL N +GNL+
Sbjct: 297 ISKSLGNAIDPLNIIQIYGTDAYRYFILREVPFGSDGNFSYTALTNRINSDLGNDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+++MI K +D +IP    ++E D+ +  +    L +I + + N    +AL  +   V 
Sbjct: 357 QRTLTMIEKYFDAVIP---EYSEKDDVLKEISQNTLSKINKELDNLQFSKALEAIWEFVG 413

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++  + +KPW L KT+    +   V+    + I+ ++I++  F+P    +I   L + 
Sbjct: 414 SANKCIEEKKPWVLAKTSAYKPQLKNVISSLAKAIKDISIVIYPFMPNTCIEIQKQLGIL 473

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + N       Q++    ++ K   P+FPR 
Sbjct: 474 ENNESPCLEYQQIIKSGVIVKKGKPLFPRI 503


>gi|319947459|ref|ZP_08021691.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746399|gb|EFV98660.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 663

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 195/517 (37%), Positives = 304/517 (58%), Gaps = 11/517 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+ + HIG AY  I  DVLAR+ R+   DV + TG DEHGQKI + A+ 
Sbjct: 3   KSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + +VD  +   +++  +LDISYD FIRTT+  H      +++++  + DIY G Y
Sbjct: 63  AGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEY 122

Query: 125 SGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWYS+ DE ++ +    EV++  +G+         + V+W+ EE YF RLS YQD+L+ 
Sbjct: 123 SGWYSVSDEEFFTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVE 182

Query: 179 YYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +++S P+FI P  R NE++ +F++ GL+DL++SR TF WG+++P +P++++YVW DAL N
Sbjct: 183 FFKSQPDFITPDGRLNEMLKNFIEPGLEDLAVSRTTFTWGVQVPSNPRHVVYVWFDALLN 242

Query: 238 YLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T  GY      +  KFW     H++GKDILRFH+IYWP  L+  ++ LP+++  HG+ 
Sbjct: 243 YVTALGYGQEDHENFDKFWNGTVFHMVGKDILRFHSIYWPILLMMLDIKLPERLIGHGWF 302

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKS GNVI P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN
Sbjct: 303 VMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARINYELAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +GNL++R+V+MI K + G +P      T  D  +  V    + E  + M      RAL 
Sbjct: 363 DLGNLLNRTVAMINKYFGGQVPAYVENVTAFDADLAKVVEENIAEYHKQMNAVDYPRALE 422

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +++S  ++Y D   PW L K + D+   + V+      +R +A L+Q F+   +N I
Sbjct: 423 AVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVMAHLIQPFMMNTSNAI 482

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +  +                +     PIFPR 
Sbjct: 483 MEQLGLGLDFDLENLNLAGFPENVTVVAKGTPIFPRL 519


>gi|325848878|ref|ZP_08170388.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480522|gb|EGC83584.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 645

 Score =  424 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 207/512 (40%), Positives = 312/512 (60%), Gaps = 12/512 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI  AA
Sbjct: 2   DKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G   + FVD+ +   +D+   LDI YD FIR+T+ +H +  + +++ + DKGDIYKG
Sbjct: 62  LSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E+Y+ + ++ +G            V   +EE YFF+LS Y DKL   ++ 
Sbjct: 122 EYDGYYCESCESYFTESQLDEGN----CPDCGRAVDHHKEESYFFKLSKYTDKLKELFKD 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEF+ P  R+NE+++     GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT 
Sbjct: 178 HPEFLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + +    K+WPA +H+IGKDI+RFH I WPA L++ ++PLP+KVF+HG+IL   +
Sbjct: 238 IGYGHDME-KFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDND 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++ P  ++E  G DAL+YFL+RE   G DG +       R N+DL N +GNL
Sbjct: 297 KMSKSKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+VSMI K  DG+I         DE ++++C +  ++  + M +   + AL  + +LV
Sbjct: 357 LSRTVSMISKYNDGIIKKGSETDSYDEDLINLCHKTYEDFTKLMDDFKFNEALECLWNLV 416

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              ++Y D  +PW L +    +R +TVLY   E +R +A +L+  +     +I   L + 
Sbjct: 417 RRSNKYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGL- 475

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            EN+ F S  +   +K G  ++K    +F R 
Sbjct: 476 -ENKGFASAKEFGLIKEGTKVNK-GQNLFNRL 505


>gi|282863863|ref|ZP_06272921.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561564|gb|EFB67108.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 534

 Score =  424 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 203/520 (39%), Positives = 303/520 (58%), Gaps = 16/520 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+ 
Sbjct: 12  KAYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             VT + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DK  IYKG 
Sbjct: 72  NDVTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKDQIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G Y +  E Y    ++ +  DG         PV+ ++EE YFF+LS Y  KLL +YE+
Sbjct: 132 YEGPYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVEILKEENYFFKLSEYGPKLLEFYEA 191

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI P   RNE+++FVK GL+DLS+SR TFDWG+ +P DP++++YVWIDAL NY T  
Sbjct: 192 NPGFIQPESARNEIVNFVKQGLQDLSISRSTFDWGVPVPWDPKHVIYVWIDALLNYATAV 251

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  N +      +PAD+H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GEK
Sbjct: 252 GYGANQE-KFDSTFPADVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGEK 310

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS    I P ++    GVDA R++ +R IA G DG +  +    R  ++LAN  GNL 
Sbjct: 311 MSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLA 370

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLV 421
           SR  +M+ K + G +P   A  E+++++    +R +    E + +       +  +   V
Sbjct: 371 SRLAAMVGKYFGGALPEATAAGEAEQAVREGLARAVATADEKIGEELDFQGGILAIFDFV 430

Query: 422 SEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +V+ Y   Q+PW++ K        R +T+LY   E +R +A+LL A +P+ + K+++ L
Sbjct: 431 KQVNGYITEQEPWKVAKDESSEGQARLATILYTAAEALRGVAVLLNAVMPETSQKLWESL 490

Query: 478 F-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   +AD+         RL  G  + K    +FPR 
Sbjct: 491 GAEASLGALADQPVQDAGTWGRLPAGATVTK-GAVLFPRL 529


>gi|327398216|ref|YP_004339085.1| methionyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327180845|gb|AEA33026.1| Methionyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 621

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 213/507 (42%), Positives = 311/507 (61%), Gaps = 10/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGH+Y  + AD LAR+ RL G DV F TGTDEHGQKI KAA++
Sbjct: 2   KKYYITTPIYYVNDVPHIGHSYTTLAADTLARYKRLLGEDVFFLTGTDEHGQKIQKAAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  T K   D+   NF+ +   LDI+ + F+RTT+  H    +  ++ I  KGDIYKG Y
Sbjct: 62  ANTTPKQLADRVVENFKKLWKKLDITNNFFVRTTDDYHQKCVQEAFEYIYKKGDIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E+YY++ E+ +         + + V   +EE YFF+LSAYQD+LL +YE++P
Sbjct: 122 EGWYCIPCESYYSEIEIGENKTCPVCGRKLDLV---KEESYFFKLSAYQDRLLEFYENNP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+LP  R NE+ SFVK GLKDLS++R +FDWGI +P D ++++YVW DAL NY++    
Sbjct: 179 DFVLPQTRYNEIKSFVKMGLKDLSITRTSFDWGIPVPFDDKHVIYVWFDALLNYVSA--- 235

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +    G     WPAD+H +GKDILRFHA+YWPAFL++ +LPLPK V +HG+    G+K+S
Sbjct: 236 IGCRKGDFDDIWPADVHFVGKDILRFHAVYWPAFLMALDLPLPKHVVAHGWWTVDGKKMS 295

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP E+IE+   DA RYFL+R +  G DG + +  L +R+N+DL N  GNL++R
Sbjct: 296 KSLGNVVDPNEMIEKYPRDAYRYFLLRNVPFGLDGDFSEKELIERINSDLVNDFGNLLNR 355

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S++M+ K   G I  P A  +   SIL+      +++ ++++      AL  +   +   
Sbjct: 356 SLTMMEKYSKGNIRRPSAINDDSLSILAK--ETFKKVEDSLKVFRFDEALIAIFDFIKSA 413

Query: 425 DRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++Y   ++PW LKK    D    VLY     ++ ++ ++  F+P  ANK+ D+L +  + 
Sbjct: 414 NKYIAQKEPWSLKKQGKQDELDEVLYNLYASLKFISGIISPFLPDAANKMQDMLNLEKDK 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                LD        + K    +F R 
Sbjct: 474 TVEFYLDFYNVEEAKIKKAGM-LFERI 499


>gi|296271126|ref|YP_003653758.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093913|gb|ADG89865.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 530

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 200/517 (38%), Positives = 302/517 (58%), Gaps = 18/517 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V F TGTDEHGQKI + A+  G
Sbjct: 14  FYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGERVWFLTGTDEHGQKIMRTAEANG 73

Query: 67  VTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            T + + D+     ++ + + L+I+ DDFIRTTE RH    +   + + DKG+IYKG Y 
Sbjct: 74  TTPQEWCDKLVETAWKPLWEHLEIANDDFIRTTEPRHTKRVQEFVQDLYDKGEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E Y +  E+    +G+       P++W++EE YFFRLSAY  +LL +YE +P+
Sbjct: 134 GPYCVGCEEYKSPGELL---EGELCPIHKRPIEWLKEENYFFRLSAYGQRLLEHYERNPD 190

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P   RNEV+ FV+ GL+DLS+SR TF WGI IP DP++++YVW+DAL NY+T  GY 
Sbjct: 191 FIQPASARNEVVQFVRQGLQDLSISRSTFTWGIPIPWDPKHVIYVWVDALLNYVTAVGYG 250

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + +      WPAD+H++GKDILRFHA+ WPA L++  LPLPKK+F++G+++  GEK+SK
Sbjct: 251 SDEE-KFRSTWPADVHLVGKDILRFHAVIWPAMLMANGLPLPKKIFANGWLMVGGEKMSK 309

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S    I P ++    GVDA RY+ +R I  G+DG +  +    R  ++LAN  GNL SR 
Sbjct: 310 SNLTGISPRDLTGTFGVDAYRYYFLRAIPFGQDGSFSWEDFAARYTSELANDFGNLASRV 369

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEV 424
            +M+ K + G +P       ++++I    +   ++    +  N      +  +   + +V
Sbjct: 370 AAMVGKYFGGTLPEATDAGPAEQAIADGLAAAAEQADRMIGDNLDFSGGIGAIFDFIKQV 429

Query: 425 DRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
           + Y   Q+PW++ K +      R +T+LY   E +R +A+LL   +P    K++  L   
Sbjct: 430 NGYLTEQQPWKVAKDDSPEARARLATILYTAAEALRGIAVLLNPVMPVACAKLWASLGAE 489

Query: 479 -----VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                +AD+     +   RL  G  + K  + +FPR 
Sbjct: 490 PHLGPLADQRIGEVAQWGRLPAGARIVK-GEVLFPRL 525


>gi|261417229|ref|YP_003250912.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373685|gb|ACX76430.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 690

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 187/511 (36%), Positives = 306/511 (59%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGH+Y  ++AD+L RFH++ G    F TGTDEHGQK+ +AA  
Sbjct: 2   KNFYVTTPIYYVNDAPHIGHSYTTVLADILTRFHKIIGYQTFFLTGTDEHGQKVQRAAAK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             VT +  VD+    F D+   ++I  D FIRTT   H    +   +K+ DKG+IY   Y
Sbjct: 62  RNVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+ +E ++++DE+    + +     H PV+W++E+ YFF++SAYQ KL+ Y ESH 
Sbjct: 122 EGWYSVGEERFFSEDEL---DENKCDPISHRPVEWLKEKNYFFKMSAYQQKLIDYLESHK 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           ++I+P  R NE+  F++  L DL +SR      WGI +P DP Y+ YVW DAL NY++ +
Sbjct: 179 DWIVPDYRWNEIRGFLRQPLNDLCISRPKIRLSWGIPLPFDPDYVTYVWFDALLNYVSAS 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
                        WPA  H+IGKDIL  H++YWP  L++ ++PLP+ + +HG+ L   GE
Sbjct: 239 TAFHKTYADGTPIWPASYHLIGKDILTTHSVYWPTMLMALDIPLPQHILAHGWWLVNGGE 298

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +E+ G+DA RYFL RE+  G+D  +  +G  +R+N+DLAN +GN+
Sbjct: 299 KMSKSAGNVVNPMDYMEKYGIDAFRYFLAREMVVGQDANFTHEGFVRRINSDLANDLGNV 358

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   ++L ++ G++P P A  ++   ++++ +RV   + E +    + + + ++++LV
Sbjct: 359 LNRVHRLVLTNFGGVLPAPNALDDAANEVITIANRVRTNVMEWVPQVKLSQVVEEIMTLV 418

Query: 422 SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             ++RY + + PW+L K     D  +TVLY++ E +R    +L   +P  + +   ++  
Sbjct: 419 RSINRYLEIKAPWKLAKDESKKDELATVLYISAEAVRLSLSMLWPVIPGKSEEGLAMIG- 477

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +        +   LK G    +   P+FPR 
Sbjct: 478 SKFTDQNDLVWGILKGGEKFGE-GKPLFPRI 507


>gi|239948424|ref|ZP_04700177.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241563440|ref|XP_002401705.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501897|gb|EEC11391.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|239922700|gb|EER22724.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 508

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 246/511 (48%), Positives = 345/511 (67%), Gaps = 13/511 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL   DV+F TGTDEHGQK+ KAA N 
Sbjct: 4   TYYITTPIYYVNDVPHIGHAYTSVASDVIARFMRLRSFDVMFLTGTDEHGQKVEKAAINK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S +FR +   + IS DDFIRTTE RH +   + W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y++ E+ +G           PV+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFYDESELTEGK----LAPMGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++   Y 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISVLDY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +   +  KFWPA+LHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 PDEQSNYGKFWPANLHVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIPTPGAFTESDE----SILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            + + K+ DG +P        D+     IL   S+  ++    M    I++ L ++I+L 
Sbjct: 359 TAFVYKNNDGKVPLLTQ-DVIDKIYELPILKNASKFAEQNILLMDKTEINKILEKIINLA 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E + Y D++ PW LKK +PD+   VLY  +EV+R +AI+L  F+P  ANK+ D L V  
Sbjct: 418 EEANIYIDSEAPWNLKKIDPDKMLEVLYTLLEVLRYIAIMLLPFIPSSANKMLDQLGVNK 477

Query: 482 ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           E R F+ L  D  L  G  + +    IFP+F
Sbjct: 478 EERLFKHLVRDYALTAGSNILEP-TIIFPKF 507


>gi|148285047|ref|YP_001249137.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|146740486|emb|CAM81042.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 511

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 232/513 (45%), Positives = 334/513 (65%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+T I Y N  PHIGHAY  I+ADV ARF RL G +V+F TGTDEHGQK+ KAA 
Sbjct: 2   KSKYYITTPIYYVNDIPHIGHAYTSILADVYARFMRLLGKEVIFLTGTDEHGQKVEKAAS 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           NAGV+ K FVD+ + +F  ++  L++S DDFIRTT+ RH    + LW  +  +GDIY G 
Sbjct: 62  NAGVSPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTRHIKAVQKLWNILKQQGDIYLGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY+++DEA+Y++ E+               V+W+EE  YFF LS +Q KLL +YE++
Sbjct: 122 YCGWYAIKDEAFYSESELTTDGK----APTGAEVEWVEESSYFFALSKWQQKLLDWYENN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            + I P   RNEVI+F+K+GL DLS+SR TF WGI +P+D  +++YVW+DAL NY++  G
Sbjct: 178 HDIIKPAFFRNEVINFIKNGLIDLSISRTTFKWGIAVPNDSSHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +       FWPADLH++GKDILRFHA+YWPAFL+SA LPLPK +  HG+  ++G+KI
Sbjct: 238 YASDNGTLMTNFWPADLHIVGKDILRFHAVYWPAFLMSAGLPLPKAILVHGWWTNEGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVI+P+E+  + G+D +RYFL+REI  G DG + K     R+N++L N +GNLV 
Sbjct: 298 SKSVGNVINPVELTSKFGIDQVRYFLLREITIGNDGNFSKISFINRINSELCNKLGNLVH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           R++S I K     IP     T ++    ES+L     +   +   + N+ +   L +++ 
Sbjct: 358 RTLSFIYKYNKAKIPQLDGITITNLYKSESLLLKIVMLSDNLANIIDNENVTVILNRIME 417

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V++ + YFD Q PW+ K +N  + +T+LY  +E IR +AILLQ F+P+ AN I D++ +
Sbjct: 418 IVNQANIYFDQQTPWKFKDSNSQKIATILYTLIETIRCIAILLQPFIPESANTILDLIAI 477

Query: 480 ADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
               R F  ++    +KPG  + +   PIF + 
Sbjct: 478 EKTERTFSCINSSYAIKPGKTILEP-KPIFVKI 509


>gi|256545789|ref|ZP_05473145.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398485|gb|EEU12106.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 646

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 205/510 (40%), Positives = 305/510 (59%), Gaps = 8/510 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI  AA
Sbjct: 2   DKNAYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKALRGFDAYLTTGTDEHGQKIMNAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G   + FVD+ +   + +   LDI YD FIR+T+ +H +  + +++ + DKGDIYKG
Sbjct: 62  LSHGSKPQEFVDRIAGETKVLLKKLDIDYDSFIRSTDPKHEENVKNIFQYLYDKGDIYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G+Y    E+Y+ + ++  G            V   +EE YFFRLS Y DKL   ++ 
Sbjct: 122 HYDGYYCESCESYFTESQLDDGN----CPDCGRGVNHRKEESYFFRLSNYTDKLKELFKD 177

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HPEF+ P  R+NE+++     GL+DLS+SR TFDWG+ +P D ++++YVWIDAL+ YLT 
Sbjct: 178 HPEFLEPKFRQNEMLNNFIDKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  + +    K+WPA +H+IGKDI+RFH I WPA L++ ++PLPKKVF+HG+IL   +
Sbjct: 238 IGYGYDME-KFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPKKVFAHGWILFDND 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++ P  ++E  G D+L+YFL+RE   G DG +       R N+DL N +GNL
Sbjct: 297 KMSKSKGNIMYPEPLVELYGTDSLKYFLLREFNFGADGNFLSKKFMDRYNSDLVNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR+VSMI K  DG+I       E D  ++++  +  ++  + M     + AL  + +LV
Sbjct: 357 LSRTVSMISKYNDGIIKKGLEEDEIDGELIALAEKTYEDFTKLMDEFKFNEALECLWNLV 416

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              ++Y D  +PW L ++ N DR +TVLY   E +R +A +L   +     +I   L V 
Sbjct: 417 RRSNKYVDQTEPWILGREENYDRLNTVLYNLAESLRIIAQMLGPVMRNTTEEILRQLGVE 476

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++          +K G  + K  + +F R 
Sbjct: 477 NQGFESAHKFGLIKEGTKVSK-GENLFNRL 505


>gi|218885863|ref|YP_002435184.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218756817|gb|ACL07716.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 657

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 203/514 (39%), Positives = 295/514 (57%), Gaps = 16/514 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y NA+PH+GHAY  I+AD L RFHRL G D  F TGTDEHG KI +AA+ 
Sbjct: 2   DRFYITTPIYYVNAKPHLGHAYTTIVADSLRRFHRLLGKDTYFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG + + FVD  S  FRD+   L + YD FIRTT+  H    + + +K+ D GDIY G Y
Sbjct: 62  AGCSPQEFVDGVSTQFRDLWPHLGVEYDQFIRTTDAEHKKCVQDVLQKVYDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    +G     Q  P +++ E+ YFFR+S YQ  L  Y   +P
Sbjct: 122 GGHYCYGCERFYTEKELE---NGLCPQHQVKP-EYISEKNYFFRMSKYQGWLRQYILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   R+EV+  + SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRSEVLGILDSGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D+      +FWP   H++ KDIL+ HA++WP  L +A L     +  HG+ L +  
Sbjct: 238 LGWPDDE--KFGRFWPGVQHLVAKDILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRDT 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP+ +I++ G+ A RYFL+RE+  G D  + +D L  R+NADLAN +GNL
Sbjct: 296 KMSKSLGNVVDPLSMIDKYGLSAFRYFLLREMHFGSDASFSEDALVARLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR +SM  K + G++P  G  TE DE+I ++     +      +      AL  +  LV
Sbjct: 356 FSRVLSMTAKYFGGVVPAQGPLTEEDEAIRTLAEEAQRNYVRLFERVRFSNALESLWELV 415

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++RY D   PW L K  + +R  TV+YV +E +R++A+ L   +P+ +  +   L   
Sbjct: 416 RALNRYVDHAAPWTLFKQGDTERLGTVMYVMLECMRKVAVHLWPVMPEASTVLLGQLGQT 475

Query: 481 DENRCFQSLDQ-----RLKPGFMLHKTFDPIFPR 509
            +    Q  D+      L  G  +  +   +FPR
Sbjct: 476 LDPATVQLADEADRWGGLAAGTTV-ASSSNLFPR 508


>gi|157804069|ref|YP_001492618.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|157785332|gb|ABV73833.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 510

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 243/512 (47%), Positives = 339/512 (66%), Gaps = 11/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N  PHIGHAY  +++DV+ARF RL G +V+  TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNNVPHIGHAYTSVVSDVIARFMRLCGFEVILLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F DQ S NFR +   + IS DDFIRTTE RH +   + W+K+ D G IYKG 
Sbjct: 62  NKNIDPQQFTDQISENFRHLMTSMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYKGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY++RDEA+Y++ E+               V+W++E  YFF LS +QDKLL  YE +
Sbjct: 122 YEGWYAVRDEAFYDESELTSD----GLAPTGASVEWVKEPSYFFNLSKWQDKLLELYELN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+FI PI RRNEVI+FVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  G
Sbjct: 178 PDFIRPISRRNEVINFVKSGLKDLSVSRTTFNWGIKVPNNEKHVIYVWLDALANYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +   +  KFWPA LHV+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KI
Sbjct: 238 Y-PDEQSNYGKFWPAALHVVGKDILRFHAVYWPAFLMAAKIPLPKTIMAHGWWTNEGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI++I+E GVD +RYFL+RE+  G DG + +  L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLLQ 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISL 420
           R+ + + K+ DG +P            L +    ++   +N   M+   +++ L  +I+L
Sbjct: 357 RTTAFVYKNNDGKVPLLTQSVIDKIYTLPILKAAIKCAEQNILLMEKTEVNKILENIINL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             E + Y D + PW LKKT+ D+   VLY  +EV+R +AI+LQ FVP  ANK+ D L V 
Sbjct: 417 AEEANIYIDNKAPWNLKKTDHDKMLEVLYALLEVLRYIAIMLQPFVPTSANKMLDQLGVN 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            + R F+ L  D  L  G  + +    IFPR 
Sbjct: 477 KKERLFKHLVRDYALTVGAAILEP-TIIFPRI 507


>gi|229816447|ref|ZP_04446748.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
 gi|229807989|gb|EEP43790.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
          Length = 548

 Score =  421 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 202/533 (37%), Positives = 301/533 (56%), Gaps = 24/533 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I Y NA PH+G AY  IIADV AR+ R  G +V F TG DEHGQK+A+
Sbjct: 16  MSSKPSYYITTPIYYVNADPHLGTAYSTIIADVQARYRRAAGYNVKFLTGMDEHGQKVAE 75

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T + + D  + +F ++ + L+IS DDFIRTTE R     + LW+++ + G IY
Sbjct: 76  AAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIY 135

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWY + DE ++ + +V K  +               P++ ++EE +FF+LSA+QD
Sbjct: 136 KGSYDGWYCVPDETFFTETQVDKADEARGTKGEHLCPDCDRPLERVKEESWFFKLSAFQD 195

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           KLL+ Y+ HP+F+ P  R NEV SFV+ GL DLS+SR +FDWGI++P D +++ YVW DA
Sbjct: 196 KLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIEVPFDDEHVTYVWFDA 255

Query: 235 LTNYLTTTGYLDNPDG---SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           L NY+T  GY    D      A  WPA  H++GKDI+RFH + WPA L++    LP+ VF
Sbjct: 256 LINYMTAVGYGAEGDEAAADFAYRWPAQTHIVGKDIIRFHCVIWPAMLMALGEALPEHVF 315

Query: 292 SHGFILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           +HGF+  K       EK+SKS GN I P EVIE++GV+  RY+ + ++  G DG      
Sbjct: 316 AHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMTDVTPGTDGAISFGR 375

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRE 403
           +++  NADLAN  GNL+SRS +M +K ++G  P   A     ++  + S    + +    
Sbjct: 376 MEQVYNADLANSWGNLISRSTNMCIKYFEGATPERAADAAGYAENPLASAAEGIFERYAA 435

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAIL 461
            M+      A  +++ L+   + Y +  +PW L K        + V++  +E IR  A L
Sbjct: 436 KMEAFAYGDAAKEIMDLIHAANHYIEDSEPWTLAKDPAKAGELANVIWNLLEAIRISAHL 495

Query: 462 LQAFVPKLANKIFDILFVADENRCFQS----LDQRLKPGFMLHKTFDPIFPRF 510
           L   +P  + +    +    E          +  +L  G  + K  + +FPR 
Sbjct: 496 LMPLMPSTSAEALRRIGCEGEAATDDMDASCVWGQLAAGLPVEK-GEALFPRL 547


>gi|269925297|ref|YP_003321920.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788957|gb|ACZ41098.1| methionyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 528

 Score =  421 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 217/520 (41%), Positives = 315/520 (60%), Gaps = 21/520 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+TAI Y NA+PHIG A E++  DVLAR+HRL G D  F TGTD++  K  +AA+  
Sbjct: 5   RYYITTAIPYVNAKPHIGFALELVQTDVLARYHRLIGDDTRFLTGTDDNALKNVQAAEAE 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124
           G++TK  VD+N+  F+ + + L +S+DDFIRT+ EKRH D  + LW+     GDIYK  Y
Sbjct: 65  GISTKELVDRNAELFKALREPLAVSFDDFIRTSGEKRHIDGVQKLWRACQRSGDIYKRVY 124

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y+++E+    +G        P + +EEE YFFRLS Y D+L+S  ES  
Sbjct: 125 KGLYCVGCEQFYSEEELV---NGLCPEHLTRP-ELVEEENYFFRLSKYTDRLISIIESGE 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT- 240
             ILP  RRNEV+SF++ GL+D S+SR   +   WGI +PDDP  +MYVW DAL NY+T 
Sbjct: 181 LRILPETRRNEVLSFIRRGLEDFSISRASSRARGWGIPVPDDPDQVMYVWFDALGNYITA 240

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
               Y            P   HVIGK ILRFHA+YWPA LLSA  PLP  ++ H ++   
Sbjct: 241 LDYAYDGELYRRYWLENPHRTHVIGKGILRFHAVYWPAMLLSAGEPLPTTIYVHEYLTIN 300

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+KISKSLGNVIDPI ++E  G DALRY+ VRE++  +D  +  D L  R NADLAN +G
Sbjct: 301 GQKISKSLGNVIDPISIVERFGTDALRYWFVREVSRTEDTDFTWDRLVTRYNADLANDLG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++R+VSMI +  +G +P+P   T+ ++ +  +   + ++I + +    +  A+  +  
Sbjct: 361 NLLNRTVSMIRRYREGKVPSPSDSTDLEQDLRQIAEGIPEKIYKYLDEFDLRAAITAIWD 420

Query: 420 LVSEVDRYFDAQKPWELKKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           LV+  +RY +   PW L +   +       R  TVLY   E +R +A+ L  F+P  ++K
Sbjct: 421 LVTRANRYVEESAPWLLARQEKNGDGAASSRLDTVLYSLAESLRVIAVHLSPFLPLTSSK 480

Query: 473 IFDILFVADENRC-FQSL--DQRLKPGFMLHKTFDPIFPR 509
           I + L +  +++  +  +     L+PG ++ +   PIFPR
Sbjct: 481 ILEQLGIGADSQTKWPDVAAWGGLQPGTLVGEP-KPIFPR 519


>gi|88856857|ref|ZP_01131510.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88813927|gb|EAR23796.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 526

 Score =  421 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 212/521 (40%), Positives = 305/521 (58%), Gaps = 15/521 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +  YI+T I Y N  PHIGHAY  + ADVLAR+HR  G D    TGTDEHGQKI +
Sbjct: 1   MSAGDSFYIATPIFYVNDVPHIGHAYTEVAADVLARWHRQRGEDAWLLTGTDEHGQKILR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A     T + + D+  + +++ + + +DI+ DDFIRTT++RH        +++ D G I
Sbjct: 61  TAVANNTTPQEWADRLVADSWQPLLETIDIANDDFIRTTDERHEKAVATFLQRLYDDGHI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQY-----YNAQHNPVQWMEEEGYFFRLSAYQD 174
           Y G Y G+Y +  E Y   D++    DG+Y           PV+ ++E+ YFFR+S +  
Sbjct: 121 YAGEYEGYYCVGCEEYKQLDDLVTAPDGEYKGQLVCAIHSRPVEVLKEKNYFFRMSDFGQ 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           KLL  YES P+F+ P   RNE++ FVK GL DLS+SR +FDWG+K+P D  +++YVW DA
Sbjct: 181 KLLDLYESQPDFVQPASVRNEIVQFVKQGLDDLSISRSSFDWGVKVPWDETHVVYVWFDA 240

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY++  GY  + +   AK WPA + ++GKDI RFHA+ WPA L++A LP+P+ VF HG
Sbjct: 241 LLNYVSAIGYGVDEEQ-FAKRWPA-VQLVGKDIARFHAVIWPAMLMAAGLPVPRAVFGHG 298

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++L  GEK+SKS    I P ++ +  G DA RY+ +  I  G+DG +  + L  R  ++L
Sbjct: 299 WLLVGGEKMSKSKLTGIAPSQITDTFGSDAFRYYFMSAITFGQDGSFSWEDLSARYQSEL 358

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           ANG GNL SR ++M+ K +DG IPT G  T SDE+I++   R  ++    +    I+ AL
Sbjct: 359 ANGFGNLASRVIAMVNKYFDGEIPTLGELTASDEAIIATQKRATEDSNAFIDTFAINEAL 418

Query: 415 AQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A V  LV E++ Y   Q+PW L K   N +R  TVL  TV  +  LAILL   +PK   +
Sbjct: 419 ASVWQLVDELNGYITEQEPWALSKDPANRERLGTVLATTVNGLGTLAILLSPVLPKATER 478

Query: 473 IFDIL---FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++  +    V  E R   +  Q  +    +      +FPR 
Sbjct: 479 LWSAIGGVGVLREQRIDDA--QTWQSTGRVTALEASLFPRI 517


>gi|189183674|ref|YP_001937459.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189180445|dbj|BAG40225.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 511

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 232/513 (45%), Positives = 336/513 (65%), Gaps = 11/513 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI+T I Y N  PHIGHAY  I+ADV ARF RL G +V+F TGTDEHGQK+ KAA 
Sbjct: 2   KSKYYITTPIYYVNDIPHIGHAYTSILADVYARFMRLLGKEVIFLTGTDEHGQKVEKAAS 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           NAGV+ K FVD+ + +F  ++  L++S DDFIRTT+ +H    + LWK +  +GDIY G 
Sbjct: 62  NAGVSPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTKHIKAVQKLWKVLEQQGDIYLGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY+++DEA+Y++ E+               V+W+EE  YFF LS +Q KLL +YE++
Sbjct: 122 YCGWYAIKDEAFYSESELTTDGK----APTGAEVEWVEESSYFFALSKWQQKLLDWYENN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            + I P   RNEVI+F+K+GL DLS+SR TF WGI +P+D  +++YVW+DAL NY++  G
Sbjct: 178 HDIIKPAFFRNEVINFIKNGLIDLSISRTTFKWGIAVPNDSSHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +       FWPADLH++GKDILRFHA+YWPAFL+SA LPLPK +  HG+  ++G+KI
Sbjct: 238 YASDNGTLMTNFWPADLHIVGKDILRFHAVYWPAFLMSAGLPLPKAILVHGWWTNEGQKI 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNVI+P+E+  + G+D +RYFL+REI  G DG ++K     R+N++L N +GNLV 
Sbjct: 298 SKSVGNVINPVELTSKFGIDQVRYFLLREITIGNDGNFNKISFINRINSELCNKLGNLVH 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           R++S I K     IP     T ++    ES+L     +   +   + N+ +   L +++ 
Sbjct: 358 RTLSFIYKYNKAKIPQLDGITITNLYKSESLLLKIVMLSDNLANIIDNENVTVILNRIME 417

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +V++ + YFD Q PW+ K +N  + +T+LY  +E IR +AILLQ F+P+ AN I D++ +
Sbjct: 418 IVNQANIYFDQQAPWKFKDSNSQKIATILYTLIETIRCIAILLQPFIPESANTILDLIAI 477

Query: 480 ADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
               R F  ++    +KPG  + +   PIF + 
Sbjct: 478 DKTERMFSCINRSHAIKPGKTILEP-KPIFVKI 509


>gi|21222203|ref|NP_627982.1| methionyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256786707|ref|ZP_05525138.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770602|ref|ZP_06529980.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|25009395|sp|Q9F2I9|SYM_STRCO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10432496|emb|CAC10330.1| putative methionyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289700801|gb|EFD68230.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 538

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 203/523 (38%), Positives = 310/523 (59%), Gaps = 19/523 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+ 
Sbjct: 12  KAYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GVT + + D+  + +++ + + LDI+ DDFIRTT+KRH D  +   + + DKG+IYKG 
Sbjct: 72  NGVTPQAWADKLVTESWKPLWEHLDIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    E+  G               PV+ + EE YFF+LS Y +KLL++
Sbjct: 132 YEGPYCVGCEEYKLPGELLDGEGEYAGQKLCPIHKKPVEILSEENYFFKLSEYSEKLLAH 191

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE++P F+ P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY 
Sbjct: 192 YEANPGFVQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYA 251

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY +NP+      +PAD+H++GKDILRFHAI WPA L++  LPLP K+ ++G+++  
Sbjct: 252 TAVGYNENPE-KFESTFPADVHLVGKDILRFHAIIWPAMLMAQGLPLPGKIAANGWLMVG 310

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  G
Sbjct: 311 GEKMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYG 370

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
           NL SR  +M+ K + G +P   A  +++++I    ++ + E    + +       +  V 
Sbjct: 371 NLASRVAAMVGKYFGGELPAATADGDAEQAIHDGLTKAVAEADRKIGEELDFQGGILAVF 430

Query: 419 SLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V +V+ Y   Q+PW++ K +      R +T+LY   E +R +A+LL   +P  + K++
Sbjct: 431 DFVKQVNGYITEQEPWKVAKDDSPEGKARLATILYTAAEALRAVAVLLNPIMPDTSQKLW 490

Query: 475 DILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D L        +AD++    +   RL  G  + K    +FPR 
Sbjct: 491 DSLGAEPSLGALADQHVQDAADWGRLPAGATVTK-GAVLFPRL 532


>gi|326778239|ref|ZP_08237504.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658572|gb|EGE43418.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 537

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 193/520 (37%), Positives = 294/520 (56%), Gaps = 17/520 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   
Sbjct: 14  YYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANN 73

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + LDI+ DDFIRTTEKRH D  +   + + DKG+IYKG Y 
Sbjct: 74  VTPQAWCDKLVEEAWKPLWEHLDIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y +  E Y    ++  G               PV+ ++EE YFF+LS Y  KLL +Y 
Sbjct: 134 GPYCVGCEEYKLPGDLIDGEGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N +      +PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYGANQE-KFDGTFPANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R I+ G DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISYGSDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
            SR  +M+ K + G +P   A  +++ ++    ++ +      + +       +  V   
Sbjct: 373 ASRVAAMVGKYFGGALPEATAAGDAELAVREGLAKAVATADRKIGEELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K        R +TVLY   E +R +A+LL   +P+ + K+++ 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTSPEGQARLATVLYTAAESLRGVAVLLHPVMPETSQKLWES 492

Query: 477 LFVADE------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L   +        R   +    + P          +FPR 
Sbjct: 493 LGAEESLGSLAGQRVQDAGAWGVLPAGATVTKGAVLFPRL 532


>gi|116747604|ref|YP_844291.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696668|gb|ABK15856.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 636

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/514 (38%), Positives = 295/514 (57%), Gaps = 16/514 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y NA+PHIGHAY  I+ADV+ RFH+L G    F TGTDEHG KI +AA +A
Sbjct: 3   RFYITTPIYYVNAEPHIGHAYTTIVADVMNRFHKLMGFGTFFLTGTDEHGDKIVQAAADA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K + D+ S  F++    L+IS D FIRTT+  H    + + +++ D GDI    Y 
Sbjct: 63  GTAPKEYADRISGMFKEAWSKLNISNDHFIRTTDPEHIRVVQHILQQVYDSGDITFSTYR 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E +Y + E+    DG+  +    P++  EE  YFFR+S YQ+ L+ + ES+P+
Sbjct: 123 GLYCVGCERFYTEREL---VDGKCPDHDKEPIE-REEANYFFRMSKYQNWLIEHIESNPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV++F++  L+DL +SR      WGI +P D +Y+ YVW DAL NY++  G
Sbjct: 179 FIRPERYRNEVLAFLREPLEDLCISRPKERLAWGITLPFDERYVTYVWFDALINYVSALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y         +FWP   H I KDIL+ H IYWP  + +A  P+ + +  HG+      K+
Sbjct: 239 Y--PDGPLFGEFWPVVQHTIAKDILKPHGIYWPTIIKAAGFPVYRHLNVHGYWKINEGKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS G V+ P+++I   G+DA RYFL+RE+  G D  + +D L +R+N+DLAN +GNL S
Sbjct: 297 SKSRGTVVRPLDMIPLYGLDAFRYFLLREMVFGLDANFSEDALVQRLNSDLANDLGNLFS 356

Query: 364 RSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R+++M LK +DG +P  G    + D  ++S   R + E RE +     H+AL  +   ++
Sbjct: 357 RTLAMTLKYFDGKVPPFGSEPDDMDRDLISRVERTVAEFREELPVFCFHKALMSIWECLN 416

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++Y D   PW L K      R  TV+ + +E+ + +A+L+  F+P  + K+ + L V 
Sbjct: 417 AANKYIDTVGPWGLAKDPSRHGRLETVIRILLELNKTMAVLISPFMPSTSEKMLERLGVV 476

Query: 481 DENRCFQSLDQR----LKPGFMLHKTFDPIFPRF 510
             +   +  +      L  G  + K  D +FPR 
Sbjct: 477 KRSIDLRLAEDGRWGTLVEGTPVSK-GDALFPRI 509


>gi|86606068|ref|YP_474831.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554610|gb|ABC99568.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 516

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 209/515 (40%), Positives = 304/515 (59%), Gaps = 13/515 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T I Y NA PHIG AY  + AD +AR+HRL G DVL  TGTDEHGQKI + A+  
Sbjct: 5   TFVITTPIYYVNAAPHIGSAYTTLAADAIARYHRLRGKDVLMVTGTDEHGQKIQRTAEER 64

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +   D+ +  F  +  +LDI YD FIRTT+ RH    R  ++++ D+GDI+ G   
Sbjct: 65  GLPPQQHCDEIAAQFAQLWQLLDIRYDRFIRTTDPRHKAIVREFFQRVWDRGDIFVGRQQ 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E+ +G  G      +  V+W +EE YFFRLS YQ+KL + Y  HPE
Sbjct: 125 GWYCVACEEFKDESELLEG--GFCPLHPNKKVEWKDEENYFFRLSRYQEKLEALYAEHPE 182

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVI+FVK GL+D S+SR +  WGI  P DP   +YVW DAL NYL+     
Sbjct: 183 FIQPESRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPSQTLYVWFDALINYLSAAVDP 242

Query: 246 DNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           ++    +    ++WPAD+H++GKDI+RFHAIYWPA L+SA LPLP+++F HGF+   G K
Sbjct: 243 EDEPTLENALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAGLPLPRQIFGHGFLTKDGLK 302

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN +DP E+++  G DA+RY+ + EI  GKDG + +    + +NADLAN +GNL+
Sbjct: 303 MGKSLGNTLDPFELVQRYGADAVRYYFLTEIELGKDGDFSEGRFIEVLNADLANDLGNLL 362

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M LK Y      P     +D  + ++  R+   + +  +      A  + +SL  
Sbjct: 363 NRTLNM-LKKYQPDYRIPAVEIPADHPLKTLAERLAPTVADAYERLDPSSAARKALSLAQ 421

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y D Q PW L K    ++ + +LY  +E +R +A+ L   +P L+ KI   +    
Sbjct: 422 ASNKYLDEQAPWTLHKQGQSEQVAQILYAVLESVRWVAVALSPIIPNLSLKILQQMGFPL 481

Query: 482 ENRCFQSLD-----QRLKPGFMLHKTFDPIFPRFL 511
           ++      D      RL PG    +   P+F R L
Sbjct: 482 QDVAQLRWDPDARWGRLPPG-QEPQPPVPVFQRIL 515


>gi|182437585|ref|YP_001825304.1| methionyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178466101|dbj|BAG20621.1| putative methionyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 537

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 193/520 (37%), Positives = 294/520 (56%), Gaps = 17/520 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   
Sbjct: 14  YYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANN 73

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG Y 
Sbjct: 74  VTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y +  E Y    ++  G               PV+ ++EE YFF+LS Y  KLL +Y 
Sbjct: 134 GPYCVGCEEYKLPGDLIDGEGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N +      +PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYGANQE-KFDGTFPANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R IA G DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
            SR  +M+ K + G +P   A  +++ ++    ++ +      + +       +  V   
Sbjct: 373 ASRVAAMVGKYFGGALPEATAAGDAELAVREGLAKAVATADRKIGEELDFQGGILAVFDF 432

Query: 421 VSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K        R +TVLY   E +R +A+LL   +P+ + K+++ 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTSPEGRARLATVLYTAAESLRGVAVLLHPVMPETSQKLWES 492

Query: 477 LFVADE------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L   +        R   +    + P          +FPR 
Sbjct: 493 LGAEESLGSLAGQRVQDAGAWGVLPAGATVTKGAVLFPRL 532


>gi|329935921|ref|ZP_08285723.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304612|gb|EGG48488.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 547

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 209/532 (39%), Positives = 310/532 (58%), Gaps = 28/532 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+ 
Sbjct: 12  KAYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GVT + + D+  +  +  + + LDI+ DDFIRTT+KRH D  +   + + DKG+IYKG 
Sbjct: 72  NGVTPQAWADKLVTEAWEPLWEHLDIANDDFIRTTQKRHTDRVQEFVQDLHDKGEIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    E+  G               PV+ + EE YFFRLS Y DKLL++
Sbjct: 132 YEGPYCVGCEEYKLPGELLDGEGEFAGQKLCPIHKKPVEILSEENYFFRLSEYTDKLLAH 191

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE++P+FI P   RNEV++FV+ GL+DLS+SR TFDWGI IP D ++++YVWIDAL NY 
Sbjct: 192 YEANPDFIQPESARNEVVNFVRQGLQDLSISRSTFDWGIPIPWDEKHVIYVWIDALLNYA 251

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY +N +    + +PAD+H++GKDILRFHA+ WPA L++  LPLP KV ++G+++  
Sbjct: 252 TAVGYNENQE-KFEETFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKVAANGWLMVG 310

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  G
Sbjct: 311 GEKMSKSNLTGIKPQDLTTHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYG 370

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
           NL SR  +M+ K +DG +P   A  E++ ++ +  ++ + E    + +       +  V 
Sbjct: 371 NLASRVAAMVGKYFDGELPASTADGEAEAAVRAGLAKAVAEADRRIGEELDFQGGILAVF 430

Query: 419 SLVSEVDRYFDAQKPWELKKT-------------NPDRASTVLYVTVEVIRQLAILLQAF 465
             V +V+ Y   Q+PW++ KT                R +T+LY   E +R +A+LL   
Sbjct: 431 DFVKQVNGYLTEQEPWKVAKTAFSDAAGAAGSEEGRARLATILYTAAEALRAVAVLLNPV 490

Query: 466 VPKLANKIFDILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +P+ + K+++ L        +AD+     +   RL  G  + K    +FPR 
Sbjct: 491 MPETSQKLWESLGAEPSLGALADQRVQEAADWGRLPAGAKITK-GAVLFPRL 541


>gi|303234887|ref|ZP_07321512.1| methionine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494005|gb|EFL53786.1| methionine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 666

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 203/512 (39%), Positives = 320/512 (62%), Gaps = 9/512 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   KEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQNAGV--TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +      ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++  G            V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQLKDGK----CPDCGRDVHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++   SG L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDDE-LFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+IP P    + D++++SV     +++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKNLISVVEGCQEKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI + + 
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKIKEQIG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +++       +  +   G  + +  + +F R 
Sbjct: 478 LSEIKWEDGRVFGKTVVGTKV-QRGENLFNRL 508


>gi|301060390|ref|ZP_07201253.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300445586|gb|EFK09488.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 642

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 211/512 (41%), Positives = 304/512 (59%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+T I Y NA+PHIGHAY  I+ADVL RFH+L G D  F TGTDEHG KI  AA+N
Sbjct: 3   EKYYITTPIYYVNAEPHIGHAYTTIVADVLNRFHKLAGFDTFFLTGTDEHGDKIVAAAEN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T K + D+ S  F+ +   L+IS   FIRTT+  H +T R +   + +K DIY   Y
Sbjct: 63  AGQTPKQYTDRISAMFQGLWPRLNISNSAFIRTTDAYHQETVRNILSLVKEKDDIYFSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG+  + Q  P   ++E  YFFR+S YQ+ L+ + + +P
Sbjct: 123 EGLYCFGCERFYTEKELV---DGKCPDHQKEP-DVIKEANYFFRMSRYQEWLIEHIKKNP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            FI P   RNEV+SF+   L+DL +SR      WGI +P D  ++ YVW DAL NY++  
Sbjct: 179 SFIRPERYRNEVLSFLSEPLEDLCISRPKSRLKWGITLPFDEDFVTYVWFDALINYVSAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY +        FWP   HVI KDIL+ H IYWP  L SA +   + +  HG+      K
Sbjct: 239 GYPEGA--DFQDFWPVAQHVIAKDILKPHGIYWPCMLKSAGIEPYQHLNVHGYWNIDAGK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P+E+++  G+D  RYFL+RE+A G D  + +D L +R+NADLAN +GNLV
Sbjct: 297 MSKSIGNVVEPLELVDIYGLDPFRYFLMREMAFGLDSEFSEDALVQRLNADLANDLGNLV 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS++M+ K ++G +P  G  +E DE++ +    +++  + +M     H+AL  V  ++S
Sbjct: 357 SRSLTMVHKYFEGALPGAGPSSEEDEALKNNAVLLIEIYQGHMNQLAFHKALMAVWEVIS 416

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--- 479
           +V++Y D   PW L K++P+R  TV+    E +R +A L+  F+P  A KI + L +   
Sbjct: 417 DVNKYIDRMAPWVLAKSDPERLKTVINHIFETLRIVAGLVWPFMPASAEKIQEQLGLTHK 476

Query: 480 ADENRCFQSLDQRL-KPGFMLHKTFDPIFPRF 510
            D+ R        L KP   + K    +FPR 
Sbjct: 477 GDQCRLTDLRTWGLEKPTHPILKAPG-LFPRI 507


>gi|320009832|gb|ADW04682.1| methionyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 537

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 299/518 (57%), Gaps = 16/518 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   
Sbjct: 17  FYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEANN 76

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DK  IYKG Y 
Sbjct: 77  VTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLFDKDQIYKGGYE 136

Query: 126 GWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           G Y +  E Y    ++ +  DG         PV+ ++EE YFF+LS Y  KL+ +Y ++P
Sbjct: 137 GPYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVELLKEENYFFKLSEYGPKLMEFYAANP 196

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P   RNE+++FVK GL+DLS+SR TFDWG+ +P DP++++YVWIDAL NY T  GY
Sbjct: 197 DFIQPESARNEIVNFVKQGLQDLSISRSTFDWGVPVPWDPKHVIYVWIDALLNYATAVGY 256

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             N +      +PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GEK+S
Sbjct: 257 GANQE-KFDGTFPANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGEKMS 315

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS    I P ++    GVDA R++ +R IA G DG +  +    R  ++LAN  GNL SR
Sbjct: 316 KSNLTGIKPQDLTSHFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLASR 375

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSE 423
             +M+ K +DG +P   A  +++ ++    +R +      + +       +  +   V +
Sbjct: 376 VAAMVGKYFDGALPEATAAGDAERAVQEGLARAVATADARIGEELDFQGGILAIFDFVKQ 435

Query: 424 VDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF- 478
           V+ Y   Q+PW++ K        R + +LY   E +R +A+LL + +P  + K++D L  
Sbjct: 436 VNGYITEQEPWKVAKDTSPEGQARLAAILYTAAESLRGVAVLLNSVMPDTSQKLWDSLGA 495

Query: 479 ------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 +AD+         +L  G  + K    +FPR 
Sbjct: 496 EASLGALADQRVQDAGRWGQLPAGATVTK-GAVLFPRL 532


>gi|210629937|ref|ZP_03296184.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
 gi|210160754|gb|EEA91725.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
          Length = 533

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 207/533 (38%), Positives = 303/533 (56%), Gaps = 24/533 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +   YI+T I Y NA PH+G AY  IIADV AR+ R  G  V F TG DEHGQK+A+
Sbjct: 1   MSSKPSYYITTPIYYVNADPHLGTAYSTIIADVQARYRRAAGYSVKFLTGMDEHGQKVAE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T + + D  + +F ++ + L+IS DDFIRTTE R     + LW+++ + G IY
Sbjct: 61  AAEKHGMTPQEWCDSQAPHFHELWEELEISNDDFIRTTEPRQKRAVQYLWERMQEAGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG Y GWY + DE ++ + +V K  +             H P++ ++EE +FF+LSA+QD
Sbjct: 121 KGSYDGWYCVPDETFFTETQVEKADEARGTEGQHLCPDCHRPLERVKEESWFFKLSAFQD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           KLL+ Y+ HP+F+ P  R NEV SFV+ GL DLS+SR +FDWGI++P D +++ YVW DA
Sbjct: 181 KLLALYDEHPDFVQPDFRMNEVRSFVEGGLNDLSVSRTSFDWGIQVPFDDEHVTYVWFDA 240

Query: 235 LTNYLTTTGYLDNPDG---SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           LTNY+T  GY    D      A  WPA  H++GKDI+RFH + WPA L++    LP+ VF
Sbjct: 241 LTNYMTAVGYGQEGDEAAADFAYRWPAQTHIVGKDIIRFHCVIWPAMLMALGEALPEHVF 300

Query: 292 SHGFILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           +HGF+  K       EK+SKS GN I P EVIE++GV+  RY+ + ++  G DG      
Sbjct: 301 AHGFLTVKNEETGKAEKMSKSRGNAIAPREVIEKLGVEGYRYYFMTDVTPGTDGAISFGR 360

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
           +++  NADLAN  GNL+SRS +M +K ++G  P     A   ++  + +V   + +    
Sbjct: 361 MEQVYNADLANSWGNLISRSTNMCIKYFEGATPERDSSAAGYAENPLAAVADGLFERYAA 420

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAIL 461
            M+      A  +V+ LV   + Y +  +PW L K        + V++  +E IR  A L
Sbjct: 421 KMEAFAYGDAAKEVMELVHAANLYIENSEPWTLAKDPAKTGELANVIWNLLECIRITAHL 480

Query: 462 LQAFVPKLANKIFDILFVADE----NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L   +P  + +    +    E    N        +L  G  + K  + +FPR 
Sbjct: 481 LMPLMPSTSAEALRRIGCEGEAATDNMAAACAWGQLAAGLPVEK-GEALFPRL 532


>gi|78356637|ref|YP_388086.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219042|gb|ABB38391.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 642

 Score =  418 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 199/514 (38%), Positives = 294/514 (57%), Gaps = 16/514 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA+PH+GHAY  I+AD L RFH L G    F TGTDEHG KI +AA+ 
Sbjct: 2   QPFYITTPIYYVNAKPHLGHAYTTIVADALRRFHTLLGKKTFFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD  S  FRD+   + I+YD F+RTT++ H    + + +K+ D GDIY G Y
Sbjct: 62  NGCTPQEYVDSISATFRDLWPSMGITYDRFVRTTDESHKKCVQAVLQKVYDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    +G     Q  P +++ E+ YFFR+S YQD L  Y   +P
Sbjct: 122 GGHYCYGCERFYTEKELE---NGLCPQHQVKP-EYIAEKNYFFRMSKYQDWLRQYILDNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S + SG L+DL +SR      WG+++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSLLDSGALEDLCISRPKSRLSWGVELPFDTDYVCYVWFDALLNYVSA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
             + D        FWP   H++ KDIL+ HA++WP  L +A       +  HG+ L +  
Sbjct: 238 LNWPDGE--EFTTFWPGVQHLVAKDILKPHAVFWPTMLKAAGFEPYNNLNVHGYWLVRDT 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P+E+    G+ A RYFL+RE+  G D  + ++ L  R+NADLAN +GNL
Sbjct: 296 KMSKSLGNVIEPLEMAGRYGLSAFRYFLLREMHFGSDASFSEEALVARLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR +SM  K +DG++P+P A+T  DE I+++     +      +      AL  +  LV
Sbjct: 356 FSRVLSMTGKYFDGVVPSPAAYTADDEDIINLAKDACRNYVRLFERVRFSNALESLWELV 415

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++Y D+  PW L KT +  R  TVLYV +E +R++A+ L   +P+ +  +   L V 
Sbjct: 416 RALNKYVDSSAPWTLYKTGDTARLGTVLYVLLECMRKVAVNLWPVMPEASEAMLGQLHVC 475

Query: 481 DEN-----RCFQSLDQRLKPGFMLHKTFDPIFPR 509
            ++     +        L+ G  + +    +FPR
Sbjct: 476 FDSAGTRLQDEAEAWGTLQAGGKV-EVSSGLFPR 508


>gi|169824241|ref|YP_001691852.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831046|dbj|BAG07962.1| methionyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 666

 Score =  418 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 203/512 (39%), Positives = 320/512 (62%), Gaps = 9/512 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQNAGV--TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +      ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++  G            V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQLKDGK----CPDCGRDVHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++   SG L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDEE-LFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+IP P    + D+S++SV     +++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVIPQPNDNNDIDKSLISVVEGCQEKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI + + 
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKIKEQIG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +++       +  +   G  + +  + +F R 
Sbjct: 478 LSEIKWEDGKVFGKTVVGTRV-QRGENLFNRL 508


>gi|15604526|ref|NP_221044.1| methionyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226189|sp|Q9ZCP0|SYM_RICPR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3861220|emb|CAA15120.1| METHIONYL-TRNA SYNTHETASE (metS) [Rickettsia prowazekii]
 gi|292572314|gb|ADE30229.1| Methionyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 508

 Score =  418 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 244/512 (47%), Positives = 342/512 (66%), Gaps = 11/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N   HIGHAY  + +DV+ARF R  G DV+F TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNDVAHIGHAYTSVASDVIARFMRFCGKDVMFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F D+ S+NFRD+   ++IS DDFIRTTE RH     + WKK+ D G IY+G 
Sbjct: 62  NQNIDPQTFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWKKLLDNGAIYEGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDEA+Y++ E+ +            PV+W++E  YFF L+ +QDKLL +YE +
Sbjct: 122 YEGWYSVRDEAFYDESEINEDK----LAPTGAPVEWVKEPSYFFNLAKWQDKLLEFYELN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ PI RRNEVISF+KSGLKDLS+SR TF WGIK+P++ ++++YVW+DAL NY++  G
Sbjct: 178 PDFVRPISRRNEVISFIKSGLKDLSISRTTFHWGIKVPNNRKHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +   + AKFWPA+L ++GKDILRFHA+YWPAFL++A +PLPK +  HG+  ++G+KI
Sbjct: 238 Y-PDKQSNYAKFWPANLQIVGKDILRFHAVYWPAFLMAAEIPLPKAIMVHGWWTNEGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI +I+E GVD +RYFL+RE+  G D  + ++ L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFARNNLITRINSELSNKIGNLLH 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISL 420
           R VS + K+ D  +P   +        L +    ++  +EN   M    I++ L  +I+L
Sbjct: 357 RIVSFVYKNNDAKVPLIKSGVIDKIYELPILKTAIKFAQENILLMDKTEINKILENIINL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + + Y   + PW LK T+PD+   VLY  +EV+R +AI+LQ FVP  ANK+ D L V+
Sbjct: 417 AEDANIYITNEAPWNLKTTDPDKMLEVLYSLLEVLRYIAIMLQPFVPNSANKMLDQLGVS 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            E R F+ L  D  LK G  + +    IFP+F
Sbjct: 477 KEERLFKHLVRDHALKAGSNILEP-SIIFPKF 507


>gi|302380917|ref|ZP_07269379.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311295|gb|EFK93314.1| methionine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 666

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 202/512 (39%), Positives = 319/512 (62%), Gaps = 9/512 (1%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E++  YI+T I YP++  H+GH Y  IIAD L +F ++ G DV  TTGTDEHGQK+ + 
Sbjct: 3   EEKKSYYITTPIYYPSSNLHLGHTYTTIIADTLKKFKKIQGYDVFLTTGTDEHGQKLYEK 62

Query: 62  AQNAGV--TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +      ++D   ++ +D+   LDI  D F+R+T+K H    + +++K+ DKGDI
Sbjct: 63  AKEKNMGDNPLNYIDPIVQSAKDLWKKLDIDIDSFVRSTDKVHEKNVQEIFQKLYDKGDI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  EA++ + ++  G            V + EEE YFFRLS Y+D++L  
Sbjct: 123 YKSTYKGHYCVDCEAFWTESQLKDGK----CPDCGRDVHYHEEESYFFRLSKYKDRILQL 178

Query: 180 YESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ +P+F+ P  R+NE+++   SG L+DLS+SR +FDWG+K+P D ++I+YVWIDAL+ Y
Sbjct: 179 YKDNPDFLKPESRKNEMVNNFLSGELEDLSVSRTSFDWGVKVPFDDKHIIYVWIDALSCY 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY  + +    KFWP D+H++GK+I+RFH I WPA L++ +LPLPK+VF+HG+IL 
Sbjct: 239 LTGIGYGQDEE-LFNKFWPCDIHLVGKEIVRFHTIIWPALLMALDLPLPKRVFAHGWILF 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             +K+SKS GNV  P  +I+  GVDAL+Y+++R+   G DG +  +    R N+DL N +
Sbjct: 298 NEDKMSKSKGNVYYPEPIIDLYGVDALKYYILRDFTFGNDGNFTTERFMNRFNSDLVNDL 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLVSRSVSM+ K +DG+I  P    + D+S++SV     +++ E ++      AL ++ 
Sbjct: 358 GNLVSRSVSMVEKYFDGVITQPNDNNDIDKSLISVVEGCQEKVEELLEELDFSNALEEIW 417

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V   ++Y D   PW L K +P+R  TVLY  ++ IR + IL   F+ + +NKI + + 
Sbjct: 418 KVVRRANKYIDETTPWILIKEDPERLKTVLYNLMDAIRVICILTSPFITETSNKIKEQIG 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +++       +  +   G  + +  + +F R 
Sbjct: 478 LSEIKWEDGKVFGKTVVGTKV-QRGENLFNRL 508


>gi|239930094|ref|ZP_04687047.1| methionyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438432|ref|ZP_06577822.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291341327|gb|EFE68283.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 538

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 202/523 (38%), Positives = 305/523 (58%), Gaps = 19/523 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V F TGTDEHGQKI + A+ 
Sbjct: 12  KAYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWFLTGTDEHGQKIMRTAEA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GV+ + + D+  + ++  +   L+I+ DDFIRTT+KRH D  +   + + DKG+IYKG 
Sbjct: 72  NGVSPQEWADKLVTESWEPLWAHLEIANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    E+  G               PV+ + EE YFF+LS Y DKLL++
Sbjct: 132 YEGPYCVGCEEYKLPGELLDGEGEYAGQKLCPIHKKPVEILSEENYFFKLSEYGDKLLAH 191

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE++P FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY 
Sbjct: 192 YEANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYA 251

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY +NP+    + +PAD+H++GKDILRFHA+ WPA L++  LPLP KV ++G+++  
Sbjct: 252 TAVGYNENPE-KFEETFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGKVAANGWLMVG 310

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  G
Sbjct: 311 GEKMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTSELANDYG 370

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
           NL SR  +M+ K + G +P   A  ++++++    ++ + E    +         +  V 
Sbjct: 371 NLASRVAAMVGKYFGGELPEATASGDAEKAVHDGLAKAVAEADRKIGDELDFQGGILAVF 430

Query: 419 SLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V +V+ Y   Q+PW++ K        R +T+LY   E +R +A+LL   +P+ + K++
Sbjct: 431 DFVKQVNGYITEQEPWKVAKDTSDEGKARLATILYTAAESLRAVAVLLNPVMPETSQKLW 490

Query: 475 DILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D L        +AD+          L  G  + K    +FPR 
Sbjct: 491 DSLGAEASLGALADQKVQEAGTWGLLPVGSTVTK-GAVLFPRL 532


>gi|157827625|ref|YP_001496689.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|157802929|gb|ABV79652.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 509

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 245/510 (48%), Positives = 345/510 (67%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G +V+F TGTDEHGQK+ KAA + 
Sbjct: 4   TYYITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEVMFLTGTDEHGQKVEKAAIDK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S++FR +   + IS DDFIRTTE+RH     I W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y++ E+               V+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFYDESELTADK----LAPTGAAVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P+D ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNDNKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + + +  KFWPA+L V+GKDILRFHAIYWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 PDQNSNYGKFWPANLQVVGKDILRFHAIYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++IEE GVD +RYFL+REI  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVS 422
            S + K+ DG +P       +    L +    +   ++N   M+   I++ L  +I+L  
Sbjct: 359 TSFVYKNNDGKVPAITQDAINKIYELPLLKTAINSAKQNILLMEKTEINKILDNIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+P++   VLY  +E +R +A++LQAF+P  A K+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQLGVNTE 478

Query: 483 NRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
            R F+  SL+  L     + +    +FPRF
Sbjct: 479 ERLFKHLSLEFALTSASDILEPV-IVFPRF 507


>gi|91205053|ref|YP_537408.1| methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123388147|sp|Q1RJZ5|SYM_RICBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91068597|gb|ABE04319.1| Methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 509

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 244/510 (47%), Positives = 345/510 (67%), Gaps = 11/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y N  PHIGHAY  + +DV+ARF RL G +V+F TGTDEHGQK+ KAA + 
Sbjct: 4   TYYITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEVMFLTGTDEHGQKVEKAAIDK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + F DQ S++FR +   + IS DDFIRTTE+RH     I W+K+ D G IY+G Y 
Sbjct: 64  NIDPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY++RDEA+Y++ E+               V+W++E  YFF LS +QDKLL +YE++P+
Sbjct: 124 GWYAVRDEAFYDESELTADK----LAPTGAAVEWVKEPSYFFNLSKWQDKLLEFYEANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P+D ++++YVW+DAL NY++  GY 
Sbjct: 180 FIRPISRRNEVISFVKSGLKDLSVSRTTFNWGIKVPNDNKHVIYVWLDALANYISALGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            + + +  KFWPA+L V+GKDILRFHA+YWPAFL++A +PLPK + +HG+  ++G+KISK
Sbjct: 239 PDQNSNYGKFWPANLQVVGKDILRFHAVYWPAFLMAAEIPLPKTIMAHGWWTNEGQKISK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN IDPI++IEE GVD +RYFL+REI  G DG + +  L  R+N++L+N IGNL+ R+
Sbjct: 299 SLGNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLLQRT 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN---MQNQLIHRALAQVISLVS 422
            S + K+ DG +P       +    L +    +   ++N   M+   I++ L  +I+L  
Sbjct: 359 TSFVYKNNDGKVPAITQDAINKIYELPLLKTAINSAKQNILLMEKTEINKILDNIINLAE 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y D++ PW LKKT+P++   VLY  +E +R +A++LQAF+P  A K+ D L V  E
Sbjct: 419 EANIYIDSEAPWNLKKTDPEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQLGVNTE 478

Query: 483 NRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
            R F+  SL+  L     + +    +FPRF
Sbjct: 479 ERLFKHLSLEFALTSASDILEPV-IVFPRF 507


>gi|256833172|ref|YP_003161899.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686703|gb|ACV09596.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 538

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 211/525 (40%), Positives = 303/525 (57%), Gaps = 21/525 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++T I Y N  PHIGHAY  + ADVL R+HR    DV F TGTDEHG+K+ + A   
Sbjct: 7   PFYLTTPIYYVNDAPHIGHAYTTVAADVLTRWHRQRQHDVWFLTGTDEHGEKVMRTAHAN 66

Query: 66  GVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           GVT + + D+    ++  + D +D   DDFIRTTE+RH    +    ++ D+GDIY+G Y
Sbjct: 67  GVTPQQWADKLVKESWLPVLDTIDARNDDFIRTTEQRHERAVQKFISQLHDQGDIYQGSY 126

Query: 125 SGWYSLRDEAYYNDDEVYKG---ADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y +  E Y    E+  G    DGQ        PV+ + E+ +FF LS Y +KLL+ Y
Sbjct: 127 EGPYCVGCEEYKLPSELLDGTGEFDGQKLCPLHGRPVEMLAEQNWFFNLSQYGEKLLALY 186

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E HPEF+ P   RNEVI FVK GL+DLS+SR TFDWG+ +P DP ++MYVW DAL NY+T
Sbjct: 187 EEHPEFVQPASARNEVIGFVKQGLQDLSISRSTFDWGVPVPWDPTHVMYVWFDALLNYIT 246

Query: 241 TTGY---LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
             G+            KFWPA +H++GKDILRFHA+ WPA L++A LPLP  VF+HG++L
Sbjct: 247 ALGWGSDDPTAQERFDKFWPASVHLVGKDILRFHAVIWPAMLMAAGLPLPTTVFAHGWLL 306

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS    I P ++I+  G DA RY+ +R I+ G+DG +  + +  + NA LANG
Sbjct: 307 VGGEKMSKSKLTGIAPSDIIDHFGSDAFRYYFMRAISFGQDGSFSWEDMSAQYNAALANG 366

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNL SR  +M+ K +DG +P  G  T+++  +  V +  +      +      RA+  V
Sbjct: 367 WGNLASRLAAMVNKYFDGTLPQVGDLTDAEHHVHQVAATAVTNAEAAIDAISPTRAIEAV 426

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +LV  ++ Y   Q+PW++ K         R +T+L    E +R LA+LL   +P+ A+K
Sbjct: 427 WTLVDALNMYITEQEPWKVAKDPEQTRPGGRLATILVTAAEGLRALAVLLNPVMPQAASK 486

Query: 473 IFDILFVAD-------ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +++ L   +       +     +   +L  G  + K    +FPR 
Sbjct: 487 LWESLGAEEHLGALDAQPTSDAARFGQLPVGTTITK-GTVLFPRL 530


>gi|269928561|ref|YP_003320882.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787918|gb|ACZ40060.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 525

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 217/524 (41%), Positives = 301/524 (57%), Gaps = 21/524 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R + YI+T+I Y NA PH+GHA E ++AD  AR+HRL G D  F TGTDE+      AA
Sbjct: 5   GRHRFYITTSIPYVNAAPHLGHALEYVLADAFARYHRLTGDDTRFLTGTDENSLTNVLAA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYK 121
           +  G+     VD+N+  FR + + LDIS DDFIRT  E RH +  + LW+  +  GDI K
Sbjct: 65  EREGIPVADLVDRNAEAFRRLTEYLDISNDDFIRTAAEPRHIEGAQKLWEACARAGDIDK 124

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             YSG Y +  E +Y ++E   G         H P++ +EEE YFFRLS YQD L    +
Sbjct: 125 RYYSGLYCVLGEQFYTEEEAPDG----LCPEHHIPLELVEEENYFFRLSRYQDALARAID 180

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNY 238
           S    I+P  RRNEV +F+  GL+D+S+SR   +   WGI +P DP  +MYVW DAL NY
Sbjct: 181 SEALRIIPETRRNEVRAFIARGLEDVSISRTRARARGWGIPVPGDPDQVMYVWFDALANY 240

Query: 239 LTTTGYLDNP--DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           +T  GY  +           P  +HVIGK ILRFHA+YWPA L+SA  PLP  +  HG++
Sbjct: 241 ITALGYAHDADLYRRYWVENPHRVHVIGKGILRFHAVYWPAMLMSAGEPLPTTIVVHGYL 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKSLGNV+DP E+    G DA+RY+++ E+   +D  Y  + L++R NADLAN
Sbjct: 301 TVGGEKMSKSLGNVVDPAELTARYGADAVRYWMLLEVPPTQDADYTDEKLERRYNADLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
            +GNL++R+VSMI +   G++P PG    +D+ + +V + +   I E M QN     ALA
Sbjct: 361 DLGNLLNRTVSMIRRYRAGLVPAPGEPVTTDQDLEAVAANLPGAIAEAMGQNFDPQTALA 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP-------DRASTVLYVTVEVIRQLAILLQAFVPK 468
            +  LV   +RY +   PW L +           R  T LY   E +R +A  L+ F+P 
Sbjct: 421 AIWDLVVRANRYVEETAPWSLARAERSGDAAATARLDTALYHLAEALRIIAQALRPFLPD 480

Query: 469 LANKIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            A +I + + VA E   + +     +L PG  + +   PIFPR 
Sbjct: 481 TAKRIAEQIGVALETPSWPAALTWGQLPPGTQVSEPR-PIFPRI 523


>gi|328883600|emb|CCA56839.1| Methionyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 535

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 195/520 (37%), Positives = 305/520 (58%), Gaps = 16/520 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+ 
Sbjct: 12  KAFYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEA 71

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             VT + + D+     ++ + + L+I+ DDFIRTT+KRH D  +   + + DK +IYKG 
Sbjct: 72  NDVTPQAWCDKLVEEAWKPLWEHLNIANDDFIRTTQKRHTDRVQEFVQDLYDKDEIYKGG 131

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G Y +  E Y    ++ +  DG         PV+ ++EE YFF+LSAY  KLL +YE+
Sbjct: 132 YEGPYCVGCEEYKLPGDLIEAEDGTKLCAVHKKPVEILKEENYFFKLSAYGPKLLEFYEA 191

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI P   RNEV++FVK GL+DLS+SR TFDWG+ +P D ++++YVWIDAL NY T  
Sbjct: 192 NPGFIQPESARNEVVNFVKQGLEDLSISRSTFDWGVPVPWDEKHVIYVWIDALLNYATAV 251

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY +NP     + +PA++H+IGKDILRFHA+ WPA L++  LP+P +V ++G+++  GEK
Sbjct: 252 GYNENPA-KFDETFPANVHLIGKDILRFHAVIWPAMLMAQGLPVPGRVAANGWLMVGGEK 310

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL 
Sbjct: 311 MSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFTARYTSELANDYGNLA 370

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLV 421
           SR  +M+ K + G +P   A  +++++I    ++ +      + +       +  +   V
Sbjct: 371 SRVAAMVGKYFGGALPASTADGDAEKAIHEGLAKAVSVADVKIGEELDFQGGILAIFDFV 430

Query: 422 SEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +V+ Y   Q+PW++ K   +    R +T+LY   E +R +A+LL   +P+ +  +++ L
Sbjct: 431 KQVNGYITEQEPWKVAKDESEEGRARLATILYTAAESLRAVAVLLNPIMPETSQALWESL 490

Query: 478 F-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   +A +     +   +L  G  + K    +FPR 
Sbjct: 491 GAEASLGTLAAQPVQSAATWGQLPAGATVTK-GAVLFPRL 529


>gi|170782642|ref|YP_001710976.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157212|emb|CAQ02395.1| putative methionyl tRNA synthetase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 528

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 209/519 (40%), Positives = 305/519 (58%), Gaps = 12/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   E  YI+T I Y N  PHIGHAY  + ADVLAR+HR  G D  F TGTDEHGQKI +
Sbjct: 4   MSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQRGDDTWFLTGTDEHGQKILR 63

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A     T K + D+  + +++ + + +DIS DDFIRTT+ RH ++ ++  +++ D G I
Sbjct: 64  TATANDTTPKAWADRLVTESWQPLLEAVDISNDDFIRTTDARHEESVKVFLQRLHDAGFI 123

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y G Y G+Y +  E Y    ++ +G               PV+ +EE+ YFFR+S + ++
Sbjct: 124 YTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAIHSKPVELLEEKNYFFRMSDFGER 183

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL++YE  P+FI P   RNE++SFV+ GL+DLS+SR +FDWGI IP D  +++YVW +AL
Sbjct: 184 LLAFYEERPDFIQPESARNEILSFVRRGLEDLSISRSSFDWGIPIPWDESHVVYVWFEAL 243

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY  + D +  + WPA  H++GKDILRFHA+ WPA L++     P++VF HG+
Sbjct: 244 MNYVTAIGYGVDDD-AFHRRWPA-THLVGKDILRFHAVIWPAMLMALGEEPPRRVFGHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P  + +  G+DA RY+ +R  A G+DG +  + L  R  A+LA
Sbjct: 302 LLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYYFMRAFAFGQDGSFSWEDLSARYQAELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR ++M+ + +DG IP     TE+D  + SV         + ++   IH +LA
Sbjct: 362 NGFGNLSSRVIAMVGRYFDGRIPEANELTEADLRVQSVARAAASTADDAIERLAIHESLA 421

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +LV E++ Y  +Q+PW L K + DRA   TVL+  V  +  LA+LL   +P    K+
Sbjct: 422 AVWTLVDELNGYITSQEPWALAKKDEDRARLETVLHTAVRGLGTLAVLLAPVLPGATAKL 481

Query: 474 FDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  L        +     D+    G  +     P+FPR 
Sbjct: 482 WTALGGTGTVGQQRIDLADEWTGSGT-VTPLDAPLFPRI 519


>gi|206889557|ref|YP_002248229.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741495|gb|ACI20552.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 642

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 197/523 (37%), Positives = 294/523 (56%), Gaps = 20/523 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +  YI+T I Y N  PHIGHAY  I AD+LAR+ RL G  V F TGTDEHGQK+ +
Sbjct: 1   MNQNKGFYITTPIYYVNDIPHIGHAYTTIAADILARYMRLKGRKVFFLTGTDEHGQKVER 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G T K   D    NF+ +   L+IS D FIRTT++ H    + + +++ DKG+I 
Sbjct: 61  AALQKGKTPKEHADIMVENFKTLWKGLNISNDAFIRTTDEEHKRIVQEILQRLYDKGEIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  YSG Y    E ++ + ++ +G            V+++EEE YFF +S YQ  L+ + 
Sbjct: 121 KRKYSGMYCTPCERFWTEKDLVEGK----CPDCGRDVEFIEEENYFFLMSKYQQALIEHI 176

Query: 181 ESHPEFILPIERRNEVISFVKS---GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           E +P +ILP  R+NEV+ F+K+   G   +S  +   +WGI +P D  Y  YVW DAL N
Sbjct: 177 EKNPSYILPETRKNEVLGFLKNRTLGDLCISRPKHRLEWGIILPFDENYTTYVWFDALVN 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y +   Y         ++WP D H+IGKDIL  HA+YW   L++  LPLP+ +F+HG+  
Sbjct: 237 YYSALKY---LAPENVEWWPPDHHLIGKDILTTHAVYWSTMLMALELPLPRNIFAHGWWT 293

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG+K+SKSLGNV++P EVI++ GVDA RYFL RE++ G DG + ++ L +R+N DLAN 
Sbjct: 294 VKGKKMSKSLGNVVNPSEVIKKYGVDAFRYFLFREVSFGLDGDFSEEALIRRINNDLAND 353

Query: 358 IGNLVSRSVSMILKDY------DGMIPTPGAFTE--SDESILSVCSRVLQEIRENM--QN 407
            GNL++R + M  K        + +IP   A     SD   LS    +++EI   +    
Sbjct: 354 FGNLLNRFLVMNEKYMKGAVKINSIIPRSEATRNLYSDNEFLSSFKSLIEEINNEILWDE 413

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +  L ++   +S  + Y    +PW++ K  P+R   +L+     IR + + L  F+P
Sbjct: 414 FKFNIILEKIWQAISLTNNYIAKTEPWKVLKEEPERLPLILFNIWNAIRIITVFLYPFMP 473

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + ANKI+  L + D    ++ L   L    +  +  + +FP+ 
Sbjct: 474 ETANKIWYALGLRDYIIDYKMLKWELDIKEVKTEKIEQLFPKI 516


>gi|85859641|ref|YP_461843.1| methionyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722732|gb|ABC77675.1| methionyl-tRNA synthetase / protein secretion chaperonin
           [Syntrophus aciditrophicus SB]
          Length = 644

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/513 (39%), Positives = 305/513 (59%), Gaps = 16/513 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA PHIGHAY  I+ADVLAR+HRL G    F TGTDEHG KIA+AA+ 
Sbjct: 13  KTFYITTPIYYVNASPHIGHAYTTIVADVLARYHRLSGHRTFFLTGTDEHGDKIAEAAEK 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K + D+ S  FR++   L +S D FIRTT+  H  T + +  K+ + GDIY G Y
Sbjct: 73  NGISPKAYADRISSQFRNLWPELSVSNDYFIRTTDANHIATVQAILSKVYEAGDIYFGHY 132

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y +  E +Y + E+    DG+  + Q  P ++ +E  YFF++S YQD L+S+ +++P
Sbjct: 133 EGFYCVGCERFYTEKEL---IDGKCPDHQMEP-EFRKESNYFFKMSKYQDWLISHIKANP 188

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P   RNEV++F++  L+DL +SR      WGI +P D  Y+ YVW DAL NY+T  
Sbjct: 189 DFIRPERYRNEVLAFLREPLEDLCISRPKSRLAWGISLPFDANYVTYVWFDALINYITGL 248

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY      +   FWP   H+I KDIL+ H IYWP  L +A +   + +  HG+      K
Sbjct: 249 GY--PDGENFHTFWPVAQHLIAKDILKPHGIYWPTMLKAAGIEPYRHLNVHGYWNVDQSK 306

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVI P+++ ++ G+DA RY+L+RE+  G D  + ++G  +RVNADLAN +GNLV
Sbjct: 307 MSKSLGNVIRPLDLKDKYGLDAFRYYLLREMVFGLDSSFSEEGFVQRVNADLANDLGNLV 366

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR  +M +K        P A +E+D  + S   RV+QE+  + +    H+AL  +  L++
Sbjct: 367 SRVTAMAVKY--CKGSVPAASSEADTILSSTAVRVIQEVEASFRELTFHKALMSIWDLIN 424

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +RY   ++PW L K   N      V+Y  +E +R +++L+  F+P  + KI   L +A
Sbjct: 425 TANRYIVEKEPWNLAKDPANQGTLDDVIYSLLETLRIVSVLIAPFMPGSSVKIMTSLGIA 484

Query: 481 D-ENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           + E + F  +     L  G  L +  + +FPR 
Sbjct: 485 NPELQNFDMIRTWGGLAAGQTL-ERGEALFPRI 516


>gi|257063479|ref|YP_003143151.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791132|gb|ACV21802.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 526

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 204/519 (39%), Positives = 295/519 (56%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +     +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQKIA+ A
Sbjct: 2   SKPMYSFTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGLDEHGQKIAETA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G T + + D     F +  D+LDI+Y DF+RT+  R   T +  W  I +KG +YK 
Sbjct: 62  EKNGTTPQAWCDSMVPAFDEAWDMLDITYTDFVRTSSDRQTRTVQKFWNDIYEKGYLYKS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWM--EEEGYFFRLSAYQDKLLSY 179
            Y GWY + +E YY + ++ K  DG         PV+ M   EE +FF+LS +Q+ LL +
Sbjct: 122 AYEGWYCVHEETYYAESDLEKNEDGEFICPDCKRPVRHMASGEENWFFKLSEFQEPLLKF 181

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE HP+FI P  RRNEV++FVKSGL+DLS+SR TFDWGI +P D  ++ YVW DAL  YL
Sbjct: 182 YEEHPDFIRPETRRNEVVTFVKSGLQDLSISRSTFDWGIPLPFDEGHVCYVWADALLAYL 241

Query: 240 TTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T  GY     +G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L 
Sbjct: 242 TGIGYADPEREGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPVTGTVFGHGFLLV 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS GN I P ++++  G DA RY+ + ++  G DG    + + +  NADLAN  
Sbjct: 302 GGEKMSKSKGNGIKPADLVKVYGSDAYRYYFMSDVRFGHDGNISIERMTQVYNADLANTW 361

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL SR  +M+ K +DG +P  P    +++  + ++   +  ++   M       A+A +
Sbjct: 362 GNLCSRVFNMVGKYFDGKVPEVPAELKDAENPLRTIAEGLYAKVDPCMAEVNFTDAVAAI 421

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L    + Y +   PW L K+   +   + VLY  +E  R +A+    F+P+ + ++F 
Sbjct: 422 QELAGAANLYVEQSAPWNLAKSEETKGELAAVLYNALEACRIMALFFAPFMPRTSAEVFR 481

Query: 476 ILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L + D    ++    S   +L  G  + K  DP+FPR 
Sbjct: 482 RLGLDDITAVDDIEAASAWGQLPAGNPVEK-GDPLFPRL 519


>gi|239942576|ref|ZP_04694513.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989037|ref|ZP_04709701.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291446038|ref|ZP_06585428.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348985|gb|EFE75889.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 537

 Score =  414 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 193/521 (37%), Positives = 299/521 (57%), Gaps = 19/521 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+   
Sbjct: 14  YYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEAND 73

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG Y 
Sbjct: 74  VTPQAWADKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYE 133

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y +  E Y    ++  G               PV+ ++EE YFF+LS Y  KLL +Y 
Sbjct: 134 GPYCVGCEEYKLPGDLIDGEGEFAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLEFYA 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P+FI P   RNEV++FV+ GL+DLS+SR TFDWG+ +P D ++++YVW+DAL NY T 
Sbjct: 194 ANPDFIQPESARNEVVNFVEQGLQDLSISRSTFDWGVPVPWDDKHVIYVWVDALLNYATA 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N +      +PA++H+IGKDILRFH++ WPA L++  LPLP KV ++G+++  GE
Sbjct: 254 VGYGANQE-KFDGTFPANVHLIGKDILRFHSVIWPAMLMAQGLPLPGKVVANGWLMVGGE 312

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R I+ G DG +  +    R  ++LAN  GNL
Sbjct: 313 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISYGSDGSFSWEDFSARYTSELANDYGNL 372

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
            SR  +M+ K + G +P   A  ++++++    ++ +      + +       +  +   
Sbjct: 373 ASRVAAMVGKYFGGALPQDTAAGDAEQAVRDGLAKAVATADRKIGEELDFQGGILAIFDF 432

Query: 421 VSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +V+ Y   Q+PW++ K        R +T+LY   E +R +A+LL + +P+ + K+++ 
Sbjct: 433 VKQVNGYITEQEPWKVAKDTTPEGQARLATILYTAAESLRGVAVLLNSVMPETSQKLWES 492

Query: 477 LF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L        +AD+          L  G  + K    +FPR 
Sbjct: 493 LGAEESLGALADQKVQDAGAWGILPAGATVTK-GAVLFPRL 532


>gi|50955324|ref|YP_062612.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951806|gb|AAT89507.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 529

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 209/523 (39%), Positives = 298/523 (56%), Gaps = 15/523 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +    YI+T I Y N  PHIGHAY  + ADVLAR+ R  G D    TGTDEHGQKI +
Sbjct: 1   MSDGSSFYITTPIFYVNDVPHIGHAYTEVAADVLARWRRQAGDDTWLLTGTDEHGQKILR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A   G T K + D+     +  +   +DI+ DDFIRTT++RH    +   +K+ D G I
Sbjct: 61  TATANGTTPKEWADRLVRDEWLPLLTTVDIANDDFIRTTDERHEKNVQKFLQKLYDDGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y G Y   Y +  E +    E+  G     D +       P++ ++E+ YFFR+S + +K
Sbjct: 121 YAGEYEALYCVGCEEFKPQSEIVDGTGEYADQKVCAIHSKPLELLQEKNYFFRMSDFAEK 180

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL+ YE  P+F+ P   RNEV+SFV+ GL DLS+SR +FDWGIK+P D  +++YVW DAL
Sbjct: 181 LLALYEERPDFVQPESARNEVVSFVRQGLSDLSISRSSFDWGIKVPWDESHVVYVWFDAL 240

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY  + + +  + WPA  H++GKDILRFHA+ WPA LL+A L +P +VF HG+
Sbjct: 241 LNYITAVGYGQDEE-AFERRWPA-THLVGKDILRFHAVIWPAMLLAAGLEVPHRVFGHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P ++ +  G DA RY+ +R I  G+DG +  + L  R  A+LA
Sbjct: 299 LLVGGEKMSKSKLTGIAPTQITDTFGSDAFRYYFLRAINFGQDGSFSWEDLSARYQAELA 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR V+M+++ + G +P  G F E+D  +  V ++   +    M    IH  +A
Sbjct: 359 NGFGNLASRVVAMVMRYFGGEVPAAGEFREADLEVQRVVAQAAADADAAMARLAIHDGIA 418

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V ++V +++ Y   Q+PW L K     +R  TVLY  VE +R LA+LL   +PK    +
Sbjct: 419 AVWTIVDQLNGYITEQEPWALAKDEAKRERLQTVLYTAVEGLRALAVLLSPVIPKATAAL 478

Query: 474 FDILFVADE------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  L V  E       R   + D    P        + +FPR 
Sbjct: 479 WTALGVEGELGGLDAQRLRSAGDWGQVPAGTAVNGLEALFPRI 521


>gi|51473863|ref|YP_067620.1| methionyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826289|sp|Q68W54|SYM_RICTY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51460175|gb|AAU04138.1| MetRS [Rickettsia typhi str. Wilmington]
          Length = 507

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 244/512 (47%), Positives = 338/512 (66%), Gaps = 11/512 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y N   HIGHAY  + +DV+ARF R  G DV+F TGTDEHGQK+ KAA 
Sbjct: 2   KNTYYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDVMFLTGTDEHGQKVEKAAI 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  + F D+ S+NFRD+   ++IS DDFIRTTE RH     + W+K+ D G IY+G 
Sbjct: 62  NKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGF 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWYS+RDEA+Y++ E+ +            PV+W++E  YFF L+ +QDKLL +YE +
Sbjct: 122 YEGWYSVRDEAFYDESEITEDK----LAPTGAPVEWVKEPSYFFNLAKWQDKLLEFYELN 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           P+F+ PI RRNEVISFVKSGLKDLS+SR TF+WGIK+P++ ++++YVW+DAL NY++  G
Sbjct: 178 PDFVRPISRRNEVISFVKSGLKDLSISRTTFNWGIKVPNNEKHVIYVWLDALVNYISALG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  +   + +KFWPA+L V+GKDILRFHA+YWPAFL++A +  PK +  HG+  + G+KI
Sbjct: 238 Y-PDQQSNYSKFWPANLQVVGKDILRFHAVYWPAFLMAAEISPPKSIMVHGWWTNAGQKI 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPI +I+E GVD +RYFL+RE+  G D  + ++ L  R+N++L+N IGNL+ 
Sbjct: 297 SKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFTRNNLITRINSELSNKIGNLLH 356

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           R VS +  + D  +P    G   +  E  IL    +  QE    M    I++ L  +I+L
Sbjct: 357 RIVSFVYNNNDAKVPLIKSGVIDKIYELPILKTAMKFAQENILLMDKIEINKILENIINL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + + Y   + PW LKKT+ D+   VLY  +EV+R +AI+LQ FVP  ANK+ D L VA
Sbjct: 417 AEDANIYIANEAPWNLKKTDYDKMLEVLYTLLEVLRYVAIMLQPFVPSSANKMLDQLGVA 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            E R F+ L  D  LK G  + +    IFP+ 
Sbjct: 477 KEERLFKHLVRDHALKAGSNILEP-SIIFPKI 507


>gi|323359386|ref|YP_004225782.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275757|dbj|BAJ75902.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 524

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 203/523 (38%), Positives = 301/523 (57%), Gaps = 17/523 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      YI+T I YP+  PHIGH Y  +  D LAR+HR  G D    TGTDEHGQK+ +
Sbjct: 1   MTSGRSFYITTPIYYPSDVPHIGHGYTTVAVDTLARWHRQAGDDTWMLTGTDEHGQKMMR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA   G T + +VD+    ++  +   LD++ DDFIRT++ RH +      + + D+G I
Sbjct: 61  AAAANGATPQEWVDKLVGESWFPLLKTLDVANDDFIRTSQPRHEERVAKFVQALYDRGYI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y G +   Y +  E +  + E+  G               P++ ++E+ YFF+LS +Q+ 
Sbjct: 121 YAGEFEALYCVGCEEFKTEAEIVDGEGPFEGLKVCAIHSKPLELLQEKNYFFKLSEFQEP 180

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  Y++ P+F+ P   RNEV+SFVK+GLKDLS+SR TFDWGI++P D  +++YVW+DAL
Sbjct: 181 LLELYKTVPDFVRPESARNEVVSFVKNGLKDLSISRSTFDWGIQVPWDEAHVIYVWVDAL 240

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY T  GY  +P+   A+ WPA  HV+GKDILRFHA+ WPA L++A L +P+ VF+HG+
Sbjct: 241 LNYATAIGYGTDPE-EFARRWPA-YHVVGKDILRFHAVIWPAMLMAAGLEVPRGVFAHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P E+ +  G DA R++ +  IA G+DG +  + L  R  A+LA
Sbjct: 299 LLVGGEKMSKSKLTGIAPTEITDVFGSDAYRFYFLSAIAFGQDGSFSWEDLSARYQAELA 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR+++MI + ++G++P  G  TE D +I    +         ++   I  A+A
Sbjct: 359 NGFGNLASRTIAMIERYFEGIVPPSGELTEIDLAIQRTVADAATNADAAIEKFRIDEAIA 418

Query: 416 QVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            + ++V  ++ Y    +PW L K     +R  TVLY   E +R LA+LL   +P    K+
Sbjct: 419 AIWTIVDALNGYITDNEPWALAKGPEKRERLGTVLYTAAEGLRALAVLLSPVMPIATEKL 478

Query: 474 FDILFVA-------DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +  L  A       D+          L+PG  ++    P+FPR
Sbjct: 479 WIALGAAESIGRLHDQPLREAGEWGALRPGSSVN-GLSPLFPR 520


>gi|218437104|ref|YP_002375433.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218169832|gb|ACK68565.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 530

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 202/523 (38%), Positives = 303/523 (57%), Gaps = 17/523 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K  ++T + Y N  PHIG AY  +IADV+AR+ RL G  VL  TGTDEHGQKI + A
Sbjct: 7   NQKKFALTTPLYYVNDIPHIGSAYTTMIADVIARWKRLQGYSVLLITGTDEHGQKIQRTA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ G+  +   D+    F+ + D L+ISYD F RT+ +RH D  +  ++++ ++GDIY  
Sbjct: 67  ESKGLNPQAHCDRIVDEFKTLWDKLNISYDRFSRTSSERHQDIVKEFFQRVWEQGDIYLD 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              GWY +  E +    E+    +G      +   +W +EE YFFRLS YQ+KL  +Y  
Sbjct: 127 QQKGWYCVACEEFKEQRELT--EEGYCQIHTNLKAEWKDEENYFFRLSKYQEKLEEFYRL 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +PEFI P  RRNEV++FVK GL+D S+SR   DWG  +P DP + +YVW DAL  Y+T  
Sbjct: 185 NPEFIQPESRRNEVLNFVKQGLQDFSISRVNVDWGFPLPSDPNHTIYVWFDALLGYITPL 244

Query: 243 GYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              D     +   + +WP +LH+IGKDILRFHA+YWPA L+SA LPLP +VF HGF+   
Sbjct: 245 LNPDQEPTLENALSIWWPINLHLIGKDILRFHAVYWPAMLMSAQLPLPDRVFGHGFLTKD 304

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+ KSLGN +DP ++I   G DA+RY+ V+EI  GKDG +++      +NADLAN +G
Sbjct: 305 GQKMGKSLGNTLDPFDLIYRYGADAVRYYFVKEIELGKDGDFNETRFVNILNADLANDLG 364

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRALAQVI 418
           NL++R++ M+ K  +G  P   + +  + + L +   ++ + + E+M++   + A  ++ 
Sbjct: 365 NLLNRTLGMVQKYCNGNGPQLTSDSLDENNPLKIIGQQLSERVSESMESLQFNGACEEIF 424

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SL+   ++Y D   PW L K         VLY  +E +R  A LL    P L+N+I+  L
Sbjct: 425 SLIRACNKYIDESAPWSLFKQKKQTEVEQVLYGVLESVRLAAYLLSPITPNLSNRIYQQL 484

Query: 478 FVADENRCFQSLDQRLK----------PGFMLHKTFDPIFPRF 510
               +   F+ ++Q             P        +PIF + 
Sbjct: 485 GFCVDFNDFELVNQNFPFQDQTQWGKFPANQNLSKPEPIFSKL 527


>gi|76799721|ref|ZP_00781816.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76584925|gb|EAO61588.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 475

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 200/475 (42%), Positives = 311/475 (65%), Gaps = 10/475 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ + HIG AY  I  DVLAR+ R+ G DV + TG DEHGQKI +
Sbjct: 1   MTEKKSFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMGFDVQYLTGLDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG+T + +VD  + + + + ++LDISYD FIRTT+  H +    +++++  +GDIY
Sbjct: 61  KAEEAGITPQEYVDGMAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYY---NAQHNPVQWMEEEGYFFRLSAYQD 174
            G Y+GWYS+ DE ++ +    EVY+  +G          + V+ + EE YFFR+S Y D
Sbjct: 121 LGEYTGWYSVSDEEFFTESQLAEVYRDENGNMIGGVAPSGHEVEKVSEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +L +YY  HPEFI P  R NE++ +F++ GL+DL++SR T+ WG+++P +P++++YVWID
Sbjct: 181 RLKAYYAEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTYTWGVQVPSNPKHVIYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY++  GY  + D S   KFWPAD+H+IGKDILRFH+IYWP  L++ +LPLPK++ +
Sbjct: 241 ALMNYISALGYGWSDDLSQYHKFWPADIHMIGKDILRFHSIYWPIMLMALDLPLPKRLVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG+ + +  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N 
Sbjct: 301 HGWFVMQDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINY 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN +GNL++R+++M+ K +DG +P     T+ D  + SV +  ++   + M+     R
Sbjct: 361 ELANDLGNLLNRTIAMVNKYFDGEVPRFAVATDFDADLASVATDSIENYHKQMEAVDFPR 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAF 465
           AL  V +L+S  ++Y D   PW L K  T+ D+ + V+   V  +R +A L+Q F
Sbjct: 421 ALEAVWNLISRTNKYIDETAPWVLAKDETDRDKLAAVMSHLVASLRVVAHLIQPF 475


>gi|319957076|ref|YP_004168339.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419480|gb|ADV46590.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 651

 Score =  413 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 213/512 (41%), Positives = 313/512 (61%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  IIAD LA + R+ GL+  F TGTDEHGQKI +AA+ 
Sbjct: 6   KKAYITTPIYYVNDIPHIGHAYTTIIADTLAIYSRMAGLETFFLTGTDEHGQKIEEAAKK 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + K + D+ S  F+ + D  DISYD FIRTT++ H    +  +KK+ +KGDIYK  Y
Sbjct: 66  RGKSPKEYADEISGRFKALWDEFDISYDKFIRTTDEDHKLGVQAAFKKMYEKGDIYKDVY 125

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  EA++ + ++    DG++      P Q +EEE YFFRLS YQDKLL +Y  + 
Sbjct: 126 RGHYCISCEAFFTETQL---VDGEFCPECGKPTQIVEEESYFFRLSKYQDKLLEWYRENE 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
           + ILP  RRNEV+ FV+ GL DLS++R +FDWG+K+P   +DP+++MYVW+DAL NYLT 
Sbjct: 183 KCILPKTRRNEVMRFVEGGLDDLSITRTSFDWGVKLPPEINDPKHVMYVWLDALMNYLTA 242

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  +       FWPA +H+IGKDILRFHA+YWPAFL+S ++PLPK + +HG+    GE
Sbjct: 243 LGYGTDEKLLD--FWPARVHLIGKDILRFHAVYWPAFLMSLDMPLPKHIAAHGWWTRNGE 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P EV +  G++  RYF++RE+  G DG + +  L  R+N+DL N +GNL
Sbjct: 301 KMSKSKGNVINPKEVADAYGLENFRYFMLREVPFGGDGDFSQKALIDRINSDLGNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K  +G + +        +  L+     L ++   +    +HR L ++   +
Sbjct: 361 LNRLIGMSGKYSEGSVSSAKVAELYGDE-LAEVHDSLDKLEPLLFEMQLHRYLEELWKPL 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           S  ++  D  +PW L K    + A  +L +   ++ +++++L   +PK  + I   L   
Sbjct: 420 SIANKSIDKYQPWVLMKEGKTEEALALLGLIANILAKVSVMLHPVMPKTTDTIARALGFT 479

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
                ++ L +R  L   F + K   P+FPR 
Sbjct: 480 INQTAYEDLIKRKDLLSDFTIEK-VPPLFPRI 510


>gi|297193195|ref|ZP_06910593.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720465|gb|EDY64373.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 525

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 201/520 (38%), Positives = 307/520 (59%), Gaps = 16/520 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+ST I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+ 
Sbjct: 2   KSYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAEA 61

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GVT + + D+     ++ + + L+I+ DDFIRTTEKRH D  +   + + DKG+IYKG 
Sbjct: 62  NGVTPQEWCDKLVEEAWKPLWEHLNIANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGG 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G Y +  E Y    ++ +  DG         PV+ ++EE YFF+LS Y  KLL +Y +
Sbjct: 122 YEGPYCVGCEEYKLPGDLIEAEDGTKLCPIHKKPVEILKEENYFFKLSEYGPKLLDFYAA 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P   RNEV++FVK GL+DLS+SR TFDWG+ +P D ++++YVWIDAL NY T  
Sbjct: 182 NPDFIQPESARNEVVNFVKQGLQDLSISRSTFDWGVPVPWDEKHVIYVWIDALLNYATAV 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  N      + +PA++H++GKDILRFHAI WPA L++  LP+P KV ++G+++  GEK
Sbjct: 242 GYGSNQA-KFDETFPANVHLVGKDILRFHAIIWPAMLMAQGLPVPGKVAANGWLMVGGEK 300

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS    I P ++    GVDA R++ +R IA G+DG +  +    R  ++LAN  GNL 
Sbjct: 301 MSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFTARYTSELANDYGNLA 360

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLV 421
           SR  +M+ K ++G +P   A  E+++++    ++ + E    + +       +  V   V
Sbjct: 361 SRVAAMVGKYFEGALPAATAAGEAEQAVQDGLAKAVAEADRKIGEELDFQSGILSVFEFV 420

Query: 422 SEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD-- 475
            +V+ Y   Q+PW++ K +      R +T+LY   E +R +A+LL   +P+ + K++D  
Sbjct: 421 KQVNGYITEQEPWKVAKDDSPEGRARLATILYTAAESLRAVAVLLNPVMPETSQKLWDSL 480

Query: 476 -----ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                +  +AD+         +L  G  + K    +FPR 
Sbjct: 481 GADAALGALADQKVQEAGEWGKLPAGATVTK-GAVLFPRL 519


>gi|172036861|ref|YP_001803362.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171698315|gb|ACB51296.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 535

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 196/525 (37%), Positives = 298/525 (56%), Gaps = 17/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + +K  ++T + Y N  PHIG AY  IIADV+AR+ RL G DVLF TGTDEHGQKI +
Sbjct: 5   ITKPKKFALTTPLYYVNGVPHIGSAYTTIIADVIARYKRLIGEDVLFITGTDEHGQKIQR 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  +   DQ   +F  +   LDI YD F RTT  RH    +  ++++ D GDIY
Sbjct: 65  TAEEKGLLPQDHCDQIVASFEALWQKLDIQYDRFSRTTAPRHQAIVKEFFERVWDNGDIY 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY ++ E +    E+    DG      +   +W +EE YFF+LS YQ KL   Y
Sbjct: 125 LAQQQGWYCVQCEEFKEKRELL--EDGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELY 182

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +++P+FI P  RRNE+++F+  GL+D S+SR    WG  IP DP + +YVW DAL  Y+T
Sbjct: 183 KNNPQFIEPESRRNEILNFINQGLQDFSISRVNLAWGFPIPTDPDHTIYVWFDALLGYVT 242

Query: 241 ---TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                      + + + +WP +LH+IGKDILRFHAIYWPA L+SA LPLP+K+F HGF+ 
Sbjct: 243 ALLDPEEEPTLNNALSDWWPINLHLIGKDILRFHAIYWPAMLMSAKLPLPQKIFGHGFLT 302

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+ KSLGN +DP E++++ G DA+RY+ ++EI CGKDG +++      +NADLAN 
Sbjct: 303 KDGQKMGKSLGNTLDPFELVDKYGADAVRYYFLKEIECGKDGDFNETRFVNILNADLAND 362

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R++ M  K   G +P   A     + S+ ++   + +++    +    +    +
Sbjct: 363 LGNLLNRTLGMTQKYCQGSLPKMTATELPQEHSLKTIGLTLGEKVINAYETLKFNEGCEE 422

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++L+   +++ D Q PW L K         +LY  +E +R  A LL   +P L++KI+ 
Sbjct: 423 ILTLIQAGNKFIDEQAPWRLFKEGKQAEVEKILYGVLESVRLAAYLLAPIIPNLSSKIYQ 482

Query: 476 ILFVADENRCFQSLDQRLKPGF----------MLHKTFDPIFPRF 510
            L  + +      L++ +                     PIF + 
Sbjct: 483 QLGFSVDFNQSDRLNEVIPFAHHSQWGKLAVNQGLAKPQPIFAKL 527


>gi|269216114|ref|ZP_06159968.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130373|gb|EEZ61451.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 526

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 202/519 (38%), Positives = 292/519 (56%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +     +T I Y NA PH+G AY  + AD +AR+ R++G DV F TG DEHGQK+A+ A
Sbjct: 2   SKPTYSFTTPIYYVNAAPHLGTAYTTVAADAVARYQRMNGHDVAFVTGLDEHGQKVAETA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T + + D     F D   +LDI++ DF+RT+  R   T +  W  + +KG +YKG
Sbjct: 62  EKHGMTPQEWCDSMVPAFMDAWKMLDIAFTDFVRTSSDRQTRTVQTFWNDLYEKGYLYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWME--EEGYFFRLSAYQDKLLSY 179
            Y GWY + +E YY + ++     G         PV+ M   EE +FF+LS +QD+LL +
Sbjct: 122 AYEGWYCVHEETYYAESDLETDDAGAFICPDCKRPVRRMSSGEENWFFKLSEFQDRLLEF 181

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE+HP+FI P  RRNEV++FVK GL+DLS+SR TFDWGI +  D  ++ YVW DAL  YL
Sbjct: 182 YEAHPDFIRPETRRNEVVAFVKGGLQDLSISRSTFDWGIPLTFDEGHVCYVWADALLAYL 241

Query: 240 TTTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T  GY   +  G     WP   H +GKDI RFH + WPA L++A LP+   VF HGF++ 
Sbjct: 242 TGIGYADPDRPGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPVTHTVFGHGFLMV 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS GN I P +++   G DA RY+ + ++  G DG    + + +  NADLAN  
Sbjct: 302 GGEKMSKSKGNGIRPADLVSVYGSDAYRYYFLSDVRFGADGNVSVERMTQVYNADLANTW 361

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL SR  +M+ K +DG +P  P  FT  +  +  +   + +     M +     A A V
Sbjct: 362 GNLCSRVFNMVGKYFDGTVPQVPSGFTHVENPLRDIADGLYETFDSCMADVNFTDACAAV 421

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L S V+ Y +   PW L K+       + VLY  +E  R LA+    F+P+ + ++F 
Sbjct: 422 QELASRVNLYVEQSAPWNLAKSEETAGELAFVLYNALEACRILALYFAPFMPRTSAEVFR 481

Query: 476 ILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L + D    ++    +   +L  G  + K  DP+FPR 
Sbjct: 482 RLGLGDIAAVDDIEAATAWGQLPAGNEVEK-GDPLFPRL 519


>gi|256826934|ref|YP_003150893.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583077|gb|ACU94211.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 526

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 209/517 (40%), Positives = 296/517 (57%), Gaps = 11/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I+T I Y NA PH+G AY  I ADVL+R+ R+DG DV F  G DEHGQK+A  A
Sbjct: 2   SKGTFSITTPIYYVNAAPHLGTAYTTIGADVLSRYKRMDGYDVAFVGGMDEHGQKVADTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T + + D     F D  ++LDI+Y D +RTTE+R   T +  W  + +KG +YK 
Sbjct: 62  AKKGMTPQAWCDSMEPAFLDAWNLLDITYTDIVRTTEERQTRTVQRFWGDLYEKGWLYKD 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWME-EEGYFFRLSAYQDKLLSYY 180
            Y GWY + +E YY + ++ K  DG       H PVQ    EE +FF+LS +QD+LL++Y
Sbjct: 122 SYDGWYCVHEETYYAESDLEKDEDGTFVCPECHRPVQKASGEENWFFKLSEFQDRLLAFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           + HP+FI P+ RRNE++SFVK GLKDLS+SR TFDWGI +P D  ++ YVW DAL  Y T
Sbjct: 182 DEHPDFIQPLTRRNEIVSFVKGGLKDLSISRSTFDWGIPLPFDTGHVAYVWADALLAYFT 241

Query: 241 TTGY-LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             GY  +   G     WP   H +GKDI RFH + WPA L++A LP+  KVF HGF+L K
Sbjct: 242 GIGYADEARAGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHKVFGHGFLLTK 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS GN + P +++   GVDA RY+ + ++  G DG    + + +  NADLAN  G
Sbjct: 302 GEKMSKSKGNGVMPADLVRIFGVDAYRYYFMSDVQFGHDGNISMERMVQVYNADLANTWG 361

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR  +M  K +DG +P     +  +  +  + + + +     M       A A V  
Sbjct: 362 NLVSRVFNMTGKYFDGKVP-EAPSSAVENPLRELANNLYETYDACMAAVDFTGAAAAVQQ 420

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L S V+ Y +   PW L K     D  + V+Y  +E  R +A+ +  F+P+ ++++F  L
Sbjct: 421 LASRVNLYVEDSAPWNLAKDPARADELAAVIYNALEACRIIALFMSPFMPRTSDEVFHRL 480

Query: 478 FVADENRC----FQSLDQRLKPGFMLHKTFDPIFPRF 510
            +   +       QS    L  G  + K  +P+FPR 
Sbjct: 481 SLDAASDSTDIESQSAWGLLPAGNAVEK-GEPLFPRL 516


>gi|268679313|ref|YP_003303744.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617344|gb|ACZ11709.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 642

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 205/512 (40%), Positives = 307/512 (59%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  IIAD +AR++RL G +  F TGTDEHGQKI +AA++
Sbjct: 3   QKAYITTPIYYVNDVPHIGHAYTTIIADTMARYYRLKGYETFFLTGTDEHGQKIEEAAKS 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D+ S  FR + D  +ISYD FIRTT+  H    +  ++ + DKGDIYKG Y
Sbjct: 63  RGKTPQAYADEISGKFRALWDEFEISYDKFIRTTDAEHKAGVQKAFQVMFDKGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E ++ D ++    D           + ++EE YFF+LS YQ+ L+ +Y S  
Sbjct: 123 EGHYCVSCETFFTDTQL---VDEDKCPDCGKLTRLVKEESYFFKLSKYQEDLIKWYNSDE 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           + +LP  ++NEVISFVK GL+DLS++R +FDWG+K+    +D +++MYVW+DAL NY T 
Sbjct: 180 KCVLPKGKKNEVISFVKQGLRDLSITRTSFDWGVKLPSSMNDDKHVMYVWLDALLNYTTA 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D    +FWPA +H++GKDILRFHAIYWPAFL+S  L LPK V +HG+    GE
Sbjct: 240 LGY--GGDEKNMEFWPATMHLVGKDILRFHAIYWPAFLMSLGLALPKHVAAHGWWTRNGE 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P EV +  G++  RYF++RE+  G+DG + +  L  R+N+DL N +GNL
Sbjct: 298 KMSKSKGNVVNPKEVADAYGLENFRYFMLREVPFGQDGDFSQKALMDRINSDLGNELGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K  +G++ +    T   ES L     +L+ +  N+     +R L ++  ++
Sbjct: 358 LNRIIGMSGKYSNGVVNSKDVNT-FHESELDAVEEILKNVENNLLELQTNRYLEELWKVL 416

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           S  ++     +PW   K    ++A  ++ +   ++ ++++LL   +PK    I   L   
Sbjct: 417 SIANQAITVHEPWVKIKEGKVEQALALVALVSNILARVSVLLHPIMPKTTTTIAKALGFE 476

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
                +  L  R  L   F + K   P+FPR 
Sbjct: 477 INTASYDKLVVRKTLLEEFTIEK-VPPLFPRI 507


>gi|190570583|ref|YP_001974941.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190356855|emb|CAQ54226.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 509

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 250/513 (48%), Positives = 344/513 (67%), Gaps = 9/513 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T I Y N +PHIGHAY  +I DV ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFESFYITTPIYYVNDKPHIGHAYTSLICDVAARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  K F D+ S  FR +A++++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKTKGIEPKEFTDEISVTFRKLAELMNFDYDDFIRTTEERHEKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+  G            VQW++EE YFFRLS++Q+KLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESELIYGR-----APTGAEVQWIKEESYFFRLSSWQNKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E+ P FI P  R+NEV+SFVKSGL DLS+SR +F+WGIK+P++ ++++YVWIDALTNYLT
Sbjct: 176 ENQPNFIFPESRKNEVVSFVKSGLTDLSISRTSFNWGIKVPENDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA--DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+ +  D    KFW    ++HVIGKDILRFHA+YWPA LL+A+LPLPK++  HG+ L+
Sbjct: 236 SIGFPNIEDEEYKKFWTNSFNVHVIGKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLN 295

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +GEKISKSLGNVIDPI + EE GVD LRYFL+RE + G+DG + K  +  R+N++LAN I
Sbjct: 296 EGEKISKSLGNVIDPINLAEEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNI 355

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV R++S + K   G++P        D+  L  C  ++ ++ +++     ++ +  +I
Sbjct: 356 GNLVQRTISFLHKQCFGVVPVVDRNLLKDDESLPNCKAIIDQVMDHLSKYEFNQIILLII 415

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++ S+ + Y D   PW L KT+ +R   V+Y  +E IR + ILLQ  VPK A  I D L 
Sbjct: 416 NISSKANAYIDKSAPWTLSKTDRERMDLVIYKLLEYIRMIGILLQPIVPKSAKMILDQLQ 475

Query: 479 VADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           +  E R  +SL +  +  G  L K   PIF RF
Sbjct: 476 IPKEQRDLKSLCNACVSLGITLPKP-TPIFLRF 507


>gi|269796313|ref|YP_003315768.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098498|gb|ACZ22934.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 546

 Score =  412 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 209/530 (39%), Positives = 302/530 (56%), Gaps = 27/530 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PHIGHAY  +  DVL R+HR     V F TGTDEHGQK+ + A+  G
Sbjct: 15  FYLTTPIYYVNDAPHIGHAYTTVAGDVLTRWHRQRQERVWFLTGTDEHGQKVMRTAEANG 74

Query: 67  VTTKVFVDQNSRNFRD-MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+   +  + + + LD   DDFIRTT+ RH +  +   + + DKG+IY G Y 
Sbjct: 75  VTPQEWADRLVESSWEPVLETLDARNDDFIRTTQPRHTERVQRFIQDLHDKGEIYAGSYE 134

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y +  E Y    E+  G               PV+ + E+ YFF++SAY D+LL+ YE
Sbjct: 135 GPYCVGCEEYKLPGELLDGTGEYEGLKLCPIHSRPVEMLSEQNYFFKMSAYADRLLALYE 194

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HPEF+ P   RNEV++FVK GL+DLS+SR TFDWGI IP D  +++YVW DAL NY T 
Sbjct: 195 EHPEFVQPASARNEVLAFVKGGLQDLSISRNTFDWGIPIPWDTSHVLYVWFDALLNYATA 254

Query: 242 TGYLDNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            G   + +  + +F   WPAD+H++GKDILRFHA+ WPA L++A LPLPK VF+HG++L 
Sbjct: 255 IGLDSDDEAERERFASTWPADVHLVGKDILRFHAVIWPAMLMAAGLPLPKTVFAHGWLLV 314

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            GEK+SKS    I P ++ +  G DA RY+ +R I  G+DG +  + L  R NA+LANG 
Sbjct: 315 GGEKMSKSKLTGIAPTQITDVFGSDAFRYYFMRAIPFGQDGSFSWEDLSARYNAELANGF 374

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL SR  +MI K++ G +P PG+  +++ ++  V ++ + E    +     + A+  V 
Sbjct: 375 GNLASRVAAMISKNFGGSLPRPGSSGDAETALQQVAAKAVAEAEAAIDRISPNEAINAVW 434

Query: 419 SLVSEVDRYFDAQKPWELKK-----------TNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +LV   + Y   Q+PW++ K               R +T+L    E +R LA+LL   VP
Sbjct: 435 ALVDATNLYLTEQEPWKVAKLPGETTESGAGVEGGRLATILVTAAEALRTLAVLLNPVVP 494

Query: 468 KLANKIFDILFVAD-------ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           K A  ++  L   +       +     +   +L  G  + K    +FPR 
Sbjct: 495 KAAEGLWTALGAEEPLGPLGAQPVQTAAEFGQLPAGTRVTKGAS-LFPRL 543


>gi|187251862|ref|YP_001876344.1| methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186972022|gb|ACC99007.1| Methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 500

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 211/521 (40%), Positives = 309/521 (59%), Gaps = 42/521 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y NA PHIGH+Y  +  D+++R+ R  G +V F TGTDEHG  I KAA+ 
Sbjct: 3   KKFYITTPIYYVNAYPHIGHSYTTLACDIVSRYKRSRGEEVHFLTGTDEHGINIEKAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++ K + DQ    ++++  +LDI YDDFIRTT+KRH +T + +++ +  KGDIY G Y
Sbjct: 63  AGMSPKAWCDQVVDAYKELWKILDIKYDDFIRTTDKRHEETVQQIFEILIAKGDIYLGHY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y    EAY ++ E  +G           P+  ++EE YFF+LS YQD LL +YES+P
Sbjct: 123 SGMYCNSCEAYMDETEAPEG----ICPIHKKPLTEVKEETYFFKLSKYQDALLKFYESNP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  R  E+ +FVKSGLKDLS++R    WGI +  +P++ +YVW DAL NY +  G 
Sbjct: 179 SFLNPKFRSAEITNFVKSGLKDLSVTRTKVAWGIPVKSNPKHTIYVWFDALINYASAAGL 238

Query: 245 LDNPDGSKAKF---------------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
             N    K  F               WPAD+H+IGK+I RFH + WPA L++  +P PKK
Sbjct: 239 GLNICEDKEFFKEELKKVGLNSFEDVWPADVHLIGKEIARFHMVIWPAMLMALGIPTPKK 298

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           VF+HG+   +GEK+SK+LGN++DP +V +E G+D LR+FL RE+  G DG +  D   KR
Sbjct: 299 VFAHGWWTVEGEKMSKTLGNIVDPKKVADEYGLDPLRFFLFREVPFGADGDFSMDSFIKR 358

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            NADLAN +GNL+SR+++M +K  D       A  E    +L   + V + + E+M    
Sbjct: 359 YNADLANDLGNLLSRTLNMAVKYGDLP-----AEGEYKSPLLVKAANVDKAVEEHMSELA 413

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + + L  V SL+ +++RY D  KPW L KT+   A  V+   +  +R++A+ ++ F+P  
Sbjct: 414 LDKTLEAVWSLIGDMNRYIDETKPWALAKTDEAAAKNVIIDLIHALRKVAVWVEPFMPAT 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++                 +RL PG    + + P+FPR 
Sbjct: 474 GAEM----------------KKRLAPG--PVQKYAPLFPRL 496


>gi|332178180|gb|AEE13869.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 508

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 216/510 (42%), Positives = 309/510 (60%), Gaps = 10/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y N +PHIGHAY  +  DVLARF RL G DV F TGTDEHG+KI KAA+N
Sbjct: 3   KSFYITTPIYYVNDKPHIGHAYTTVACDVLARFRRLQGKDVFFLTGTDEHGRKIQKAAEN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                K +VD+ ++ F+D    L+IS DDFIRTT++RH+      W+ ++D GDIYKG Y
Sbjct: 63  NSSDAKSYVDRFAKIFQDAWLALNISNDDFIRTTQERHYKAVAKFWQIVNDNGDIYKGKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWY +  E +++D+++  G            V+WMEEE YFFRLS Y   LL  Y    
Sbjct: 123 SGWYCVPCETFFSDEQLVDGK----CPDCGREVEWMEEESYFFRLSKYTQPLLELYNDKK 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F++P  RRNEVI FV  GLKDLS+SR  F WGIK+PDDP +++YVW DAL NYLT  G+
Sbjct: 179 NFVMPDFRRNEVIQFVSQGLKDLSISRSKFSWGIKVPDDPGHVIYVWFDALLNYLTAAGF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++ +  K + WPAD+HV+GK+I+RFHA+ WPA L+SA LPLPK VF HG+   +GEK+S
Sbjct: 239 AEDEEKFK-RIWPADVHVVGKEIVRFHAVIWPAMLMSAKLPLPKMVFGHGWWTMEGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+D   + ++VGVD +RYFL++ +  G+DG +   GLK+ +NADLAN  GNL++R
Sbjct: 298 KSKGNVVDIWALSKDVGVDPMRYFLMKAVPFGQDGDFSYKGLKEILNADLANDFGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           + SM+ +  +  +         ES   + ++   + + I ++  N      L ++++L+ 
Sbjct: 358 TASMLERYNNSSLTEADKLFNKESFVKLRAIFDGMKERIEKHYDNLSFSFVLEEIMTLIK 417

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++ D   PW   K        ++  Y   EV+R  +I L  F+P ++  +   L + 
Sbjct: 418 GANKFLDETAPWRSFKEKGFDLEVASTFYHVFEVVRLSSIALYPFMPTISKDVLRRLSIY 477

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            E   +      L P     +  +PIF R 
Sbjct: 478 GEP-SWSEFSWGLLPMPCKIEKGEPIFKRL 506


>gi|307721053|ref|YP_003892193.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979146|gb|ADN09181.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 647

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 211/508 (41%), Positives = 307/508 (60%), Gaps = 13/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N + HIGHAY   IAD +AR+ RL G D  F TGTDEHGQKI ++A+ AG 
Sbjct: 4   YITTPIYYVNGEAHIGHAYTTFIADTMARYERLKGEDTFFLTGTDEHGQKIEESAEKAGK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+ F D+ S  F+++ D   ISYD FIRTT++ H    +  ++ +  KGDIYK  Y G 
Sbjct: 64  PTQEFADEISATFKNLWDEFGISYDKFIRTTDEDHKKGVQKAFEVMYAKGDIYKDFYEGH 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E ++ + ++    DG++          ++EE YFF+LS Y+DKLL +Y +HP+FI
Sbjct: 124 YCVSCETFFPETQL---IDGEFCPDCGRATSIVKEESYFFKLSNYEDKLLEHYANHPDFI 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           +P  R NEV+SFVK GL+DLS++R +F WG+K+P    D +++MYVW+DAL NY+T  GY
Sbjct: 181 MPRSRANEVVSFVKGGLRDLSVTRTSFSWGVKMPKSIGDDKHVMYVWLDALLNYITALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D +K  +WPAD+H +GKDILRFHAIYWPAFL+S  L LPK + +HG+    GEK+S
Sbjct: 241 --GSDEAKMNYWPADIHFVGKDILRFHAIYWPAFLMSLGLELPKHIGAHGWWTRDGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV +  GV+ LRYF++RE+  G+DG + +     R+N++L+N +GNL++R
Sbjct: 299 KSKGNVVSPKEVADAYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K  D  I +        + I +  + VL  +   M+N   HR L ++  L +  
Sbjct: 359 IIGMSGKYSDFEIDSVDVEKYHAKEI-TQMNTVLNSLDSFMENLQTHRYLEELWKLFAIG 417

Query: 425 DRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW   K N  D A   + V   ++ + A++L   +P   N I D L     N
Sbjct: 418 NGVIQEYEPWVKMKNNQKDEALATVAVVANILAKAAVMLHPIMPNTTNIIADALSFEINN 477

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509
             ++ L  D++L   F + K   P+FPR
Sbjct: 478 ASYKELIIDKKLLKLFNI-KKVPPLFPR 504


>gi|68171729|ref|ZP_00545082.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88657921|ref|YP_507787.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|67998851|gb|EAM85550.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599378|gb|ABD44847.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 506

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 237/510 (46%), Positives = 334/510 (65%), Gaps = 10/510 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            +YI+T I Y N  PHIGH Y  +I+D++ARF RLDG  V F TGTDEHGQKI KAAQ  
Sbjct: 3   NIYITTPIYYVNDVPHIGHVYTTLISDIIARFMRLDGHSVKFITGTDEHGQKIEKAAQER 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++   F D  S  FR +ADV++ SYDDFIRTTE RH  T   LW+++ D G IY G YS
Sbjct: 63  NMSLLDFTDNTSAVFRQLADVMNYSYDDFIRTTETRHKKTVVALWQRLCDNGAIYLGSYS 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDE +Y + E+  G            V+W+EE  YFFRLS +Q++LL++YE +P+
Sbjct: 123 GWYSVRDETFYQEKELVDGK-----APTGADVEWIEEPSYFFRLSNFQERLLAFYEENPD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F++P  R NEVISFVKSGLKDLS+SR+   WGIK+P+D ++++YVW+DAL NYLT  G+ 
Sbjct: 178 FVIPKYRYNEVISFVKSGLKDLSVSRQNVLWGIKVPNDDKHVIYVWVDALANYLTVLGFP 237

Query: 246 DNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           D        +W +D    L V+GKDILRFHA+YWPA L++A LPLPKK+ +HG+  ++G+
Sbjct: 238 DENHKDYQAYWASDSSSVLQVVGKDILRFHAVYWPAILMAAELPLPKKILAHGWWTNEGQ 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           KISKSLGNVI P +++EE GVD LRYFL++E+  G DG + ++ L   +N DLAN IGNL
Sbjct: 298 KISKSLGNVIKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRNSLINCINYDLANNIGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+VS++ K+  G++PT        E +L     +L+++R+ +    ++  +  +  L 
Sbjct: 358 VQRTVSLLYKECGGIVPTVSGNLLQGEEVLPDYQEILEKVRDCVMRCNLNEMIHIIEQLS 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           S  + Y  ++ PW L K++P     VLY  +E I+ + +LLQ  +PKL++KI D + + +
Sbjct: 418 SAANEYIASRAPWRLSKSDPKIMEAVLYKLLEYIKCIGLLLQPVMPKLSSKILDQIGLPE 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            NR F      +    +L K  +PIF + L
Sbjct: 478 CNRDFSRFSIPINMNTVLPKP-EPIFAKIL 506


>gi|148273554|ref|YP_001223115.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831484|emb|CAN02445.1| metS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 525

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 211/519 (40%), Positives = 305/519 (58%), Gaps = 12/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   E  YI+T I Y N  PHIGHAY  + ADVLAR+HR  G D  F TGTDEHGQKI +
Sbjct: 1   MSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQRGDDTWFLTGTDEHGQKILR 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            A     T + + D+  + +++ + + +DIS DDFIRTT+ RH ++ +I  +++ D G I
Sbjct: 61  TATAHDTTPQAWADRLVTESWQPLLEAVDISNDDFIRTTDARHEESVKIFLQRLHDAGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           Y G Y G+Y +  E Y    ++ +G               PV+ +EE+ YFFR+S + ++
Sbjct: 121 YTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAIHSKPVELLEEKNYFFRMSDFGER 180

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL++YE  P+FI P   RNE++SFV+ GL+DLS+SR +FDWGI IP D  +++YVW +AL
Sbjct: 181 LLAFYEERPDFIQPESARNEILSFVRRGLEDLSISRSSFDWGIPIPWDESHVVYVWFEAL 240

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T  GY  + +    + WPA  H++GKDILRFHA+ WPA L++     P++VF HG+
Sbjct: 241 MNYVTAIGYGVDDER-FRRRWPA-THLVGKDILRFHAVIWPAMLMALGEEPPRRVFGHGW 298

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  GEK+SKS    I P  + +  G+DA RY  +R IA G+DG +  + L  R  A+LA
Sbjct: 299 LLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYHFMRSIAFGQDGSFSWEDLSARYQAELA 358

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG GNL SR ++M+ + +DG IP     TE+DE +L+V         + +    IH ALA
Sbjct: 359 NGFGNLSSRVIAMVGRYFDGRIPAADGLTEADERVLAVARSAAATADQAIDRLAIHEALA 418

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +LV E++ Y  +Q+PW L K + DRA   TVL+  V  +  LA+LL   +P    K+
Sbjct: 419 AVWTLVDELNGYITSQEPWALAKKDEDRARLETVLHTAVRGLGTLAVLLAPVLPGATAKL 478

Query: 474 FDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  L        +     D+    G  +     P+FPR 
Sbjct: 479 WTALGGTGTVGQQRIDLADEWTGSGT-VTPLEAPLFPRI 516


>gi|152990541|ref|YP_001356263.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422402|dbj|BAF69906.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 632

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 307/512 (59%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y N  PHIGHAY  IIAD  AR+ RL+G D  F TGTDEHGQKI +AA+ 
Sbjct: 2   KKRYITTPIYYVNDVPHIGHAYTTIIADSAARYFRLNGYDTFFLTGTDEHGQKIEEAAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D+ S  F+ + D  +ISYD FIRTT   H    +  ++K+ +KGDIYKG Y
Sbjct: 62  RGKTPQEYADEISAKFKALWDEFEISYDKFIRTTNPEHIIGVQKAFEKMYEKGDIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  EA++ + ++           Q + V   +EE YFF+LS YQDKLL  Y ++ 
Sbjct: 122 EGHYCISCEAFFPESQLIDEEFCPDCGKQTSIV---KEESYFFKLSKYQDKLLELYRTND 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTT 241
            F+LP  ++NEVI FV+SGL+DLS++R +FDWGIK+P   +DP+++MYVW+DAL NY+T 
Sbjct: 179 AFVLPKNKKNEVIRFVESGLQDLSITRTSFDWGIKLPKSINDPKHVMYVWLDALLNYITA 238

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D     +WPAD H++GKDILRFHA+YWPAFL+S +LP P  + +HG+    GE
Sbjct: 239 LGY--GSDEKLMYYWPADFHLVGKDILRFHAVYWPAFLMSLDLPQPHHIATHGWWTRNGE 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP +V +  G++  RYFL+RE+  G+DG + +  L  R+N DL N +GNL
Sbjct: 297 KMSKSKGNVIDPKKVADAYGLENFRYFLLREVPFGQDGDFSQKALIDRINNDLGNDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K +D  +       +  +  L     ++  +   +     +R L ++  ++
Sbjct: 357 LNRIIGMSGKYFDFTV-DSKDVQKFHQKELQEIQSIIANLDSLVDEMKWNRYLEEIWKML 415

Query: 422 SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              ++  D   PW ++K+   D A  ++ +   ++ ++A+LL   +PK   KI + L   
Sbjct: 416 HIANKAIDTYAPWAKMKEGKADEAMALVALVSNILAKVALLLHPVMPKTTQKIAEALGFT 475

Query: 481 DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
            +   F +   +  L   F + K   P+FP+ 
Sbjct: 476 IDQSSFDTFIHQSNLLDTFTIQK-IPPLFPKI 506


>gi|262037573|ref|ZP_06011029.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748395|gb|EEY35778.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 633

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 202/511 (39%), Positives = 312/511 (61%), Gaps = 14/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI++ I YPNA PH+G AY  II DV++R+ R+ G DV F TG DEHGQKI +AA+  G
Sbjct: 5   FYITSPIYYPNAAPHVGTAYTTIICDVVSRYKRIKGYDVSFMTGVDEHGQKIQEAAEKNG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + +VD+ S NF  + + L+IS  D++RTT++RH ++ R + K++++KGDIY+G Y G
Sbjct: 65  FTPQQWVDKMSLNFTTLWEKLNISNTDYLRTTQERHIESVREIVKRVNEKGDIYRGEYVG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +  ++++  G            V  ++E  YFFRLS Y+D LL + E +P+F
Sbjct: 125 KYSVSEETFVPENQLVDG------KYMGKEVIDVKEVSYFFRLSKYEDALLKHIEENPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  ++NEV++F+K GL+DLS+SR TFDWGI +  +  +++YVW DALT YLT  G+  
Sbjct: 179 IKPESKKNEVVAFIKQGLQDLSISRTTFDWGIPLELEKGHVIYVWFDALTVYLTGAGFKK 238

Query: 247 NPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +      + W      HVIGKDILRFHAI WPA L+SA + LP  V +HG+   +GEK+S
Sbjct: 239 DEK-EFGEIWSNGKVTHVIGKDILRFHAIIWPAMLMSAGIKLPDTVAAHGWWTVEGEKMS 297

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV++P E +++ G+DA RY+L+RE   G+D  Y K  + +R+N+DLAN +GNL++R
Sbjct: 298 KSLGNVVNPEEEVKKYGLDAFRYYLMREATFGQDADYSKKAMIQRINSDLANDLGNLLNR 357

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M  K ++  +       + D  I  +  + ++++  +M       AL  +   +  +
Sbjct: 358 TIGMQKKYFNSEVILNKVEDKYDIEIKDLWEKTVEDLDIHMNEFQFSEALKDIWKFIGRM 417

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  +PW L K     DR STV+Y  V+ + ++++L+  F+P  A KI   L +  +
Sbjct: 418 NKYIDECEPWNLAKDGSKKDRLSTVMYNLVDSLYKISMLIYPFMPDTAEKIVRQLGLNID 477

Query: 483 NRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
               +  D R    +      D   P+FPR 
Sbjct: 478 FNTLKLEDIRKWGSYPAGNKLDEAVPLFPRI 508


>gi|328954955|ref|YP_004372288.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455279|gb|AEB06473.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 542

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 226/534 (42%), Positives = 314/534 (58%), Gaps = 28/534 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   YI+T I Y NA+PH+G AY  ++ADV+ARF R  G DV F TG DEHG+K+++AA 
Sbjct: 5   QPSFYITTPIYYVNARPHLGTAYATMLADVMARFKRASGADVKFLTGMDEHGEKVSEAAI 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT + + D     FRDM   L+IS DDFIRTTE+RH    + L + + D+G IYK  
Sbjct: 65  AHGVTPQRWCDCMEPAFRDMWAALEISNDDFIRTTEQRHVRGVQKLLQILRDRGFIYKDA 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGA-----DGQY--------YNAQHNPVQWMEEEGYFFRLS 170
           Y GWY + DE Y+ + +V         DG                P+Q +EEE +FF+LS
Sbjct: 125 YDGWYCVPDETYFTETQVRHHQEALSADGACECDPAAPMCPDCDRPLQRIEEESWFFKLS 184

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +Q  LL  YE+HPEFI P  RRNEVISFV+ GLKDLS+SR TFDWG+ +P DP+++ YV
Sbjct: 185 EFQQPLLDLYEAHPEFIQPETRRNEVISFVRGGLKDLSISRSTFDWGVPLPFDPEHVAYV 244

Query: 231 WIDALTNYLTTTGYLDNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           W+DAL NYLT  GY    D   A+    WPA +HV+GKDI+RFH + WPA L++A LPLP
Sbjct: 245 WVDALINYLTAVGYGRGGDEEAAELAYRWPAQMHVVGKDIIRFHCVIWPALLMAAGLPLP 304

Query: 288 KKVFSHGFILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           ++VF HGF+  +       EK+SKS GN I P EVIE +GVDA RY+ + ++A G D   
Sbjct: 305 ERVFVHGFLTVRNEQTGGAEKMSKSRGNAISPEEVIELLGVDAYRYYFMGDVAHGTDAPI 364

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +++  NADLAN  GNLVSR++SM  K + G  P      E+  ++   C  + +  
Sbjct: 365 SWGRMRQVYNADLANSWGNLVSRALSMSAKYFAGGSPARPQDFEAPSALKDACEGIYERY 424

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQL 458
             +M+     RAL +V+++VS  +RY +   PW L  T+P RA+    V++  +EVIR  
Sbjct: 425 ASHMEEVEYGRALGEVLAVVSAANRYIEDTAPWALA-TDPARAAELSHVIWSLLEVIRIA 483

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           A L   F+P ++ ++   L +   +    + D       G    +    +FPR 
Sbjct: 484 AALYDPFMPAISAEVRRRLSLPTGSTADLARDCIWGGFAGGTPVEKGTALFPRL 537


>gi|269957514|ref|YP_003327303.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306195|gb|ACZ31745.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 541

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 211/532 (39%), Positives = 305/532 (57%), Gaps = 27/532 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y N  PHIGHAY  + ADV+ R+HR    DV F TGTDEHG+K+ + A  
Sbjct: 7   KPFYLTTPIYYVNDAPHIGHAYTTVAADVVTRWHRQRQEDVWFLTGTDEHGEKVLRTATA 66

Query: 65  AGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GV+ + + D+     ++ + + LD+  DDFIRTTE RH    +   + + DKG+IY+G 
Sbjct: 67  NGVSPQEWADRLVESAWKPVLETLDVRNDDFIRTTEPRHESAVQAFLQDLHDKGEIYQGS 126

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y +  E Y    ++  G               PV+ + E+ YFFR+SAY D+LL+ 
Sbjct: 127 YEGPYCVGCEEYKLPGDLVDGTGEFEGQKVCPIHLKPVEMLAEQNYFFRMSAYADRLLAL 186

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           YE HPEF+ P   RNEVI FVK GL+DLS+SR TFDWG+ IP D Q+++YVW DAL NY+
Sbjct: 187 YEEHPEFVQPASARNEVIGFVKQGLQDLSISRSTFDWGVPIPWDSQHVLYVWFDALLNYV 246

Query: 240 TTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           T  GY  + D  +A   + WPA++H++GKDILRFHA+ WPA L++A LPLP +VF+HG++
Sbjct: 247 TAVGYGSSDDAERAQLDRLWPANVHLVGKDILRFHAVIWPAMLMAAGLPLPHQVFAHGWL 306

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  GEK+SKS    I P ++I+  G DA RY+ +R IA G DG +  + +  R N +LAN
Sbjct: 307 LVGGEKMSKSRLTGIAPSDIIDTFGSDAFRYYFMRTIAFGGDGSFSWEDMVARYNGELAN 366

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G GNL SR  +M+ K + G++PT GA T  +  + +V +  + +    +    IH AL  
Sbjct: 367 GFGNLASRVAAMVGKYFGGVLPTAGARTGLETDLEAVAATAVADAEAAIDRLAIHDALGA 426

Query: 417 VISLVSEVDRYFDAQKPWELKKT-----------NPDRASTVLYVTVEVIRQLAILLQAF 465
           V +LV   + Y    +PW++ K            +  R +T L   VE +R LA+LL   
Sbjct: 427 VWTLVDAANLYITETQPWKVAKEPGETDASGAGVDGGRLATSLVTAVEALRSLAVLLHPV 486

Query: 466 VPKLANKIFD-------ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            PK A  +++       +  +  +     +    L  G  + K    +FPR 
Sbjct: 487 TPKAAQALWELLGADAALGALDAQPVSSAASFGVLPAGTPITK-GAALFPRL 537


>gi|325478237|gb|EGC81356.1| methionine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 647

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 201/514 (39%), Positives = 305/514 (59%), Gaps = 11/514 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI K
Sbjct: 1   MTEKKPYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLLGYDTYLTTGTDEHGQKIMK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+ AGV  + FVD+ +    D+ + L+I YD FIR+TE +H      ++ K+ ++GDIY
Sbjct: 61  SAEAAGVDPQSFVDKIASETIDLWEKLEIDYDTFIRSTESQHEKDVEEIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E +++  ++  G            V++ EEE YFFRLS Y D+L   +
Sbjct: 121 KGEYKGYYCTPCETFWSKSQLEDGK----CPDCGRDVEYQEEETYFFRLSKYTDRLKELF 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP+F+ P  R+ E+++     GL DLS++R TFDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KDHPDFLEPAFRQKEMLNNFIDKGLSDLSVTRNTFDWGVDVPFDNEHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY DN +    K+WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL  
Sbjct: 237 SAIGYGDNKE-KFEKYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  +++  GVDAL++F++RE   G DG +      +R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSARKFMERYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ SMI K   G++         D+ ++++         + M     ++AL  + +
Sbjct: 356 NLVSRTTSMIDKYNGGVVRKGSVADTYDDELIALAEETYTNFNKLMDEFNFNQALEAIWT 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D  +PW L + +   DR   VLY   E IR +A L++ F+      I + +
Sbjct: 416 LIRRANKYVDETEPWILGRDDKNSDRLDRVLYNLAETIRIVAQLIEPFMKNTTKIILEKI 475

Query: 478 FVADENRCFQS-LDQRLKPGFMLHKTFDPIFPRF 510
               +N+ F+S  D  L            +F R 
Sbjct: 476 GT--DNKGFESAADFGLLEEGARVSKGKNLFDRL 507


>gi|260889017|ref|ZP_05900280.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861077|gb|EEX75577.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 633

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 207/513 (40%), Positives = 315/513 (61%), Gaps = 14/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YPNA PH+G AY  II DV+AR+ RL G +V F TG DEHGQKI +AA+ 
Sbjct: 3   KPFYITTPIYYPNAAPHVGTAYTTIICDVVARYKRLTGEEVGFMTGVDEHGQKIQEAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD+ S NF  + + L+IS  DF+RTT++RH  T R + K++ DKGDIY+G Y
Sbjct: 63  NGFTPQQWVDKMSLNFTTLWEKLNISNTDFLRTTQERHLKTVREIIKRVHDKGDIYRGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ +E +  ++++  G            V  ++E  YFF+LS Y++ LL + E +P
Sbjct: 123 VGKYSVSEETFVPENQLVDG------KYMGKEVIDVKETSYFFKLSKYENALLEHIEKNP 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  ++NEVI+F++ GL+DLS+SR TFDWGI +  +  +I+YVW DAL  YLT  G+
Sbjct: 177 DFIKPEGKKNEVIAFIRQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGAGF 236

Query: 245 LDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             + +     +    + HV+GKDILRFHAI WPA L+SA + LP  + +HG+   +GEK+
Sbjct: 237 STDTEQFDKFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++P E +E+ G+DA RY+L+RE   G+D  Y K  + +R+NADLAN +GNL++
Sbjct: 297 SKSLGNVVNPEEEVEKYGLDAFRYYLMREATFGQDADYSKKAMVQRINADLANDLGNLLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ M  K ++  +         D  I  +    L ++ +++ N     AL  +   +S 
Sbjct: 357 RTIGMQKKYFNSEVMLNEVEENFDIEIKELWKNTLVDLDKHVNNYQFSEALKDIWKFISR 416

Query: 424 VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++Y D  +PW+L K     DR STV+Y  V+ + ++A+L+  F+P+ A K+ + L +  
Sbjct: 417 MNKYIDECEPWKLSKDESRKDRLSTVMYNLVDSLYKIAVLISPFMPETAQKMINQLGLDK 476

Query: 482 ENRCFQSLDQR----LKPGFMLHKTFDPIFPRF 510
           +       D R       G  L++   P+FPR 
Sbjct: 477 DVTKLHLDDIREWKSYPAGNKLNEAV-PLFPRI 508


>gi|255994854|ref|ZP_05427989.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993567|gb|EEU03656.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 614

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 205/487 (42%), Positives = 299/487 (61%), Gaps = 11/487 (2%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           +AD +AR+ RL G DV+F TGTDEHGQK+   A+ AG     ++D    N  D+ + ++I
Sbjct: 1   MADAMARYKRLQGFDVMFLTGTDEHGQKLQSVAEAAGKKPLEYIDPIVDNILDLWEKMEI 60

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           SYDDFIRTTE RH +  + ++ ++ + GDIYKG Y G Y    EAY+ D ++  G     
Sbjct: 61  SYDDFIRTTEPRHEERVKKIFMELYENGDIYKGEYEGMYCKPCEAYWTDSQLEDG----C 116

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 PV+  +EE YFF+LS Y D+LLS YE++PE + P  RRNE+ISF+K GL DL +
Sbjct: 117 CPDCGRPVESAKEEAYFFKLSNYADRLLSLYENNPEMLQPESRRNEMISFIKQGLDDLCI 176

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           SR +FDWGIK+P D  +++YVW+DALTNY+T  GY D+      ++WP D+H++GKDI+R
Sbjct: 177 SRSSFDWGIKVPIDESHVIYVWLDALTNYITALGYPDDRK-LYDRYWPCDVHLVGKDIIR 235

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+I WP+ L+S  LPLPKK+  HG++L  G K+SKS GNV+DP  +IE  G DAL+YFL
Sbjct: 236 FHSIIWPSILMSLGLPLPKKILGHGWVLVGGGKMSKSKGNVVDPRVLIERYGTDALKYFL 295

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------PGAF 383
           +RE   G DG Y+ + L KR+N+DLAN +GNL+SR+VSMI K  +  IP+         +
Sbjct: 296 LREYTFGNDGPYEDETLIKRINSDLANDLGNLLSRTVSMIEKYKNAKIPSVPTEKLSENY 355

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             +   +L++      ++ E M     ++AL  + +L+S  ++Y D  +PW L K N   
Sbjct: 356 EAATSELLNLAKGTATKVEEAMDEFAFNKALEAIWTLISRANKYIDQTQPWNLAKDNAME 415

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
              VL+   EV+R ++IL+  F+   + +I   L +   +  ++   Q    G    K  
Sbjct: 416 LDGVLHNLAEVLRMVSILIYPFMHTSSEEIRKQLGIWYADVKWEEAKQIHMLGGEEVKKG 475

Query: 504 DPIFPRF 510
             +F R 
Sbjct: 476 KNLFERL 482


>gi|295106117|emb|CBL03660.1| methionyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 531

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 209/521 (40%), Positives = 295/521 (56%), Gaps = 14/521 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +     +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A
Sbjct: 2   SKGTYSFTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T + + D     FRD  D+L I+Y DF+RTTE RH  + +  W+++ DKG  YKG
Sbjct: 62  AAKGMTPQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAKSVQKFWQELYDKGWCYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYY 180
            Y GWY + +E YY + ++ K  +GQ        PVQ    EE +FF+LS + DKLL++Y
Sbjct: 122 SYEGWYCVHEETYYAESDLEKNDEGQLVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT
Sbjct: 182 EENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLT 241

Query: 241 TTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY D  +      + WP   H +GKDI RFH + WPA LL+A +P+   VF HGF+L 
Sbjct: 242 GIGYGDEGERAGEFDRRWPMQYHFVGKDITRFHCVIWPAMLLAAGMPITHTVFGHGFLLT 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KGEK+SKS GN + P ++    GVDA RY+ + ++  G DG    + + +  NADLAN  
Sbjct: 302 KGEKMSKSKGNALKPADLCRVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTW 361

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQLIHRALA 415
           GNL SR  +M  K +DG +P   A   +      +  +   +  E    + +     A A
Sbjct: 362 GNLCSRVFNMTKKYFDGQVPEVPASAAALVGANPLREITEELYAEYDRALGDVDFTAAAA 421

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L   V+ Y +   PW L K     D  + V+Y  +E IR +A+ L  F+P  + ++
Sbjct: 422 TVQKLAGRVNLYVEESAPWNLAKNEETADELAAVIYNALEAIRIIALYLAPFMPNTSAEV 481

Query: 474 FDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           F  L + D     +    +   +L  G  + +  DP+FPR 
Sbjct: 482 FRRLSLGDITAVTDIEAATAWGQLPAGNAV-EIGDPLFPRL 521


>gi|257125470|ref|YP_003163584.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049409|gb|ACV38593.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 633

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 208/513 (40%), Positives = 314/513 (61%), Gaps = 14/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YPNA PH+G AY  II DV+AR+ RL G +V F TG DEHGQKI +AA+ 
Sbjct: 3   KPFYITTPIYYPNAAPHVGTAYTTIICDVVARYKRLAGEEVGFMTGVDEHGQKIQEAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD+ S NF  +   L+IS  DF+RTT++RH  T R + KK+ DKGDIY+G Y
Sbjct: 63  NGFTPQQWVDKMSLNFTTLWGKLNISNTDFLRTTQERHLKTVREIIKKVHDKGDIYRGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ +E +  ++++  G            V  ++E  YFF+LS Y++ LL + E +P
Sbjct: 123 VGKYSVSEETFVPENQLVDG------KYMGKEVIDVKETSYFFKLSKYENALLEHIEKNP 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  ++NEVI+F+K GL+DLS+SR TFDWGI +  +  +I+YVW DAL  YLT  G+
Sbjct: 177 DFIKPEGKKNEVIAFIKQGLQDLSISRTTFDWGIPLELEEGHIIYVWFDALNIYLTGAGF 236

Query: 245 LDNPDGSKAKFWPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
             + +    KFW      HV+GKDILRFHAI WPA L+SA + LP  + +HG+   +GEK
Sbjct: 237 STDTE-KFDKFWTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P E +E+ G+DA RY+L+RE   G+D  Y K  + +R+NADLAN +GNL+
Sbjct: 296 MSKSLGNVVNPEEEVEKYGLDAFRYYLMREATFGQDADYSKKAMVQRINADLANDLGNLL 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ M  K ++  +         D  +  +    L ++ +++ N     AL  +   +S
Sbjct: 356 NRTIGMQKKYFNSEVVLNEVEESFDIEVKELWKITLTDLDKHINNYQFSEALKDIWKFIS 415

Query: 423 EVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y D  +PW+L K     DR STV+Y  V+ + ++A+L+  F+P+ A K+ + L + 
Sbjct: 416 RMNKYIDECEPWKLSKDESQKDRLSTVMYNLVDSLYKIAVLISPFMPETAQKMINQLGLD 475

Query: 481 DENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
            +       D +    + +    +   P+FPR 
Sbjct: 476 KDVAKLHISDIKDWKSYPVGNKLNEAVPLFPRI 508


>gi|269123753|ref|YP_003306330.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315079|gb|ACZ01453.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 624

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 199/509 (39%), Positives = 304/509 (59%), Gaps = 13/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I YPNA+PHIG AY  II DV+AR++ L G +V   TG DEHGQKI ++A+  
Sbjct: 3   NFYITTPIYYPNAKPHIGTAYTTIICDVVARYNNLKGKNVRLITGIDEHGQKIQESAEKN 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            VT + +VD+   +F ++ D+L+I Y +F+RTT  +H  T   + +K+ + GDIY G Y 
Sbjct: 63  NVTPQQWVDKMKEDFINLWDILNIDYSEFVRTTSDKHKFTVGDIIRKVYENGDIYSGEYI 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G YS+ +E +  + ++  G           PV  M+E+ +FF+LS Y+DKLL +YE HP 
Sbjct: 123 GKYSVSEETFVTESQLVDG------LYMGKPVIDMKEKSFFFKLSKYEDKLLKFYEEHPN 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NEVISF+K GL+DLS+SR TF+WGI +  +  +I+YVW DAL +YLT  GY 
Sbjct: 177 FIRPNNRKNEVISFIKQGLQDLSISRTTFNWGIPLELEKGHIVYVWFDALNSYLTAAGYN 236

Query: 246 DNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                    +W     +H++GKDILRFHAI WPA L++A + LP  +  HG+    G+K+
Sbjct: 237 SEI---FDIYWNNSEVVHMVGKDILRFHAIIWPAMLMAAGIKLPDVLAVHGWWTKDGQKM 293

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DPI+ + + G+D  RYFL+RE   G+D  Y    + +R+N+DLAN +GNL++
Sbjct: 294 SKSLGNVVDPIDEVNKYGLDQFRYFLLREATFGQDADYSNMAVIQRINSDLANDLGNLLN 353

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R + M  K +D ++       + D  I+++ S  L+ I            L  +   +S 
Sbjct: 354 RVIGMQNKYFDSIVYGINELNDLDNEIINLWSETLKNIDIYYSEYNFSEMLKCIWKFISR 413

Query: 424 VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +++Y D  +PW L K N   R  TVLY  ++ I ++A+L+   +P  + KI + L + ++
Sbjct: 414 LNKYIDESEPWTLYKNNDMGRLKTVLYNLIDGIYKIAVLISPVMPDSSKKILNQLALEEK 473

Query: 483 NRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
               +++ +  + P        + +FPR 
Sbjct: 474 ELSLENIKEWGMYPENNKLNKAEVLFPRI 502


>gi|317152912|ref|YP_004120960.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943163|gb|ADU62214.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 658

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 202/515 (39%), Positives = 307/515 (59%), Gaps = 16/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ YI+T I Y NA+PH+GHAY   +AD L RFH L G +  F TGTDEHG KI +AA+ 
Sbjct: 2   ERFYITTPIYYVNAKPHLGHAYTTTVADSLRRFHSLMGEETYFLTGTDEHGDKIVQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + + +VD  S  F+ +   ++IS DDFIRTTE RH    + + +K+ D GDIY G Y
Sbjct: 62  NGQSPRDYVDAVSGLFKALLPDMNISNDDFIRTTEPRHIKVVQSILQKVHDSGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG   + Q  P +++ E+ YFFR+S YQ  L  +  ++P
Sbjct: 122 GGHYCFGCERFYTEKELV---DGLCPDHQTKP-EYIAEKNYFFRMSKYQGWLKEHIRTNP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P + RNEV+S ++SG L+DL +SR      WGI++P D +++ YVW DAL NYL+ 
Sbjct: 178 DFIRPEQYRNEVLSLLESGELEDLCISRPKSRLTWGIELPFDSEFVTYVWFDALINYLSA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D       KFWPA  H++ KDIL+ HA++WP  L +A +   + +  HG+ L K  
Sbjct: 238 LGYPDGD--KFKKFWPAANHLVAKDILKPHAVFWPTMLKAAGIEPYQSLNVHGYWLVKDT 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNVI+P+ + ++ G+DA RYFL+RE++ G+D  + ++ L  R+NADLAN +GNL
Sbjct: 296 KMSKSIGNVIEPLAIKDKYGLDAFRYFLLREMSFGQDSSFSEEALVGRLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R++SM  K + G+IP+P A    D  I  +    ++  + +  +    R L  +  LV
Sbjct: 356 FNRTLSMTHKYFGGVIPSPDAEEIMDAEIKKLGQDSMRAFQAHFSDLRFSRGLESLWELV 415

Query: 422 SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++Y D   PW L K  N  R STV+YV +E +R++A+ L   +P+ +  +   L ++
Sbjct: 416 RGLNKYIDTSAPWTLFKAGNTGRLSTVIYVLLENMRKIAVHLWPVMPESSESMLKQLGIS 475

Query: 481 DENRCFQ-----SLDQRLKPGFMLHKTFDPIFPRF 510
                F       +   L+ G  + +T + +FPR 
Sbjct: 476 FAWDKFNLPKELEVWGVLESGSTVAETSN-LFPRI 509


>gi|258404453|ref|YP_003197195.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796680|gb|ACV67617.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 648

 Score =  409 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 196/512 (38%), Positives = 292/512 (57%), Gaps = 15/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y NA PH+GHAY  I+AD + RFHRL G +  F TGTDEHG KI +AA++A
Sbjct: 3   RYYITTPIYYVNANPHLGHAYTTIVADCVNRFHRLLGQETFFLTGTDEHGDKIVQAAEDA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G + + +VD+ S  F+     L+IS D FIRTT+  H D  +   +++ D GDIY G Y 
Sbjct: 63  GQSPQEYVDRISSKFQQQLPDLNISNDRFIRTTDSDHKDCVQRFLQQVYDNGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y    E +Y + E+  G           P +++EE+ YFFR+  YQD L+ Y + +P 
Sbjct: 123 GYYCFGCERFYTEKELVDG----LCPDHLKPPKYIEEKNYFFRMQKYQDWLVQYIQDNPG 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV+  ++  L DL +SR      WGI++P D +Y+ YVW DAL NY+T  G
Sbjct: 179 FIQPERYRNEVLGMLREPLDDLCISRPKTRLTWGIELPFDDRYVTYVWFDALINYITALG 238

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           + D       +FWP   H++ KDIL+ HAI+WP  L +A L   + +  HG+      K+
Sbjct: 239 WPDGDRYR--QFWPVAHHLVAKDILKPHAIFWPTMLKAAGLEPYQGLHVHGYWTVNETKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+ P+ + +  G+D  RYFL+RE+  G D  + ++GL  R NADLAN +GNL +
Sbjct: 297 SKSLGNVVAPLTMRDTYGLDGFRYFLLREMQFGLDASFSEEGLVARFNADLANDLGNLFN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++M  K + G +P+PGA  + D +I  +  R +Q   ++ ++      L Q+  LV  
Sbjct: 357 RALAMTHKYFGGRVPSPGALEDEDHAIRQLGVRAVQGYVDSGKSFAFAAGLRQLWDLVRG 416

Query: 424 VDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +++Y DA  PW L K    +R  TV+Y  +E +RQ+A+ L   +P  +  +   L    +
Sbjct: 417 LNKYIDATAPWTLYKAGETERLGTVMYTVLEGMRQVALALWPVMPDASGSMLQQLGQPTD 476

Query: 483 NR---CFQSLDQR--LKPGFMLHKTFDPIFPR 509
                  + + Q   L  G  + K    +FPR
Sbjct: 477 PSGRNMEEDVRQWDILAVGTEVAKK-SNLFPR 507


>gi|254457829|ref|ZP_05071256.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085222|gb|EDZ62507.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 652

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 203/508 (39%), Positives = 301/508 (59%), Gaps = 13/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N + HIGHAY   IAD + R+ +L G    F TGTDEHGQKI ++AQ  G 
Sbjct: 4   YITTPIYYVNGEAHIGHAYTTFIADTMTRYEKLKGNYTYFLTGTDEHGQKIEESAQKHGK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+ F D+ S  F+D+ D  +I YD FIRTT+  H    +  ++ +  KGDIYK  Y G 
Sbjct: 64  PTQEFADEISATFKDLWDEFEIGYDKFIRTTDADHKLGVQKAFEVMYAKGDIYKDFYEGH 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E ++ + ++    DG++          ++EE YFF+LS Y+D LL +YE +P+FI
Sbjct: 124 YCVSCETFFPETQL---IDGEFCPDCGRTTSVVKEESYFFKLSKYEDALLRHYEDNPDFI 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTTTGY 244
           LP  R NEV +FVK GL+DLS++R +F WG+K+    +D +++MYVW+DAL NY+T  GY
Sbjct: 181 LPRSRANEVKNFVKGGLRDLSVTRTSFTWGVKLPESMNDDKHVMYVWLDALMNYITALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D +   FWPA + ++GKDILRFHAIYWPAFL+S +LPLPK + +HG+    GEK+S
Sbjct: 241 --GKDDANMDFWPASMQLVGKDILRFHAIYWPAFLMSLDLPLPKHIGAHGWWTRDGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P EV +  GV+ LRYF++RE+  G+DG + +     R+N++L+N +GNL++R
Sbjct: 299 KSKGNVISPKEVSDAYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K  D  I +        + + ++ +  L  +   MQN   HR L ++  L +  
Sbjct: 359 IIGMSEKYSDFEIDSVDVEKYHAKELEAM-NEALGNLDGFMQNMQTHRYLEELWKLFAIG 417

Query: 425 DRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++  +   PW   K    D A   + +   ++ + +I+L   +P+    I D L    +N
Sbjct: 418 NKAIEEHAPWVKIKEGKKDEALATVALVANILAKASIMLSPVMPRTTATIADALNFTIDN 477

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509
             F  L  D++L   F + K   P+FPR
Sbjct: 478 ASFNELVIDKKLLKLFNI-KKVPPLFPR 504


>gi|42520232|ref|NP_966147.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42409970|gb|AAS14081.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 545

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 244/544 (44%), Positives = 338/544 (62%), Gaps = 41/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D+ S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+  G            VQW++EE YFFRLS +Q+KLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESELIDGK-----APTGAEVQWIKEESYFFRLSNWQEKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNGKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266
           + G+         +FW                                    ++HVIGKD
Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSAANLADNSFNVHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQSLLK 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E  L  C  +L ++  ++     +  +  +I++ SE + Y D   PW L KT+ +R + 
Sbjct: 416 GEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRERMNL 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505
           V+Y  +E IR + ILLQ  VPK A  I + L +  E R  +SL D  +  G  L K   P
Sbjct: 476 VIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQRDLKSLCDACVSSGITLPKP-TP 534

Query: 506 IFPR 509
           +F R
Sbjct: 535 VFLR 538


>gi|163782331|ref|ZP_02177329.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882364|gb|EDP75870.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 493

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 220/507 (43%), Positives = 304/507 (59%), Gaps = 20/507 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I Y N  PHIGHAY  I AD +ARF+RL G DV F TGTDEHG KI K+A+ 
Sbjct: 2   KKFYVTTPIYYVNDVPHIGHAYTTIAADTVARFYRLRGYDVFFLTGTDEHGLKIQKSAEE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+NS NF+ + + L I Y  FIRTT+  H +  + ++ K  + GDIY G Y
Sbjct: 62  RGVSPKELADRNSENFKRLWEFLGIEYTKFIRTTDPEHVELVKEVFTKSYENGDIYLGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E + ++ E+   A+G        P +++ E  YFFRLS YQDKLL  YE HP
Sbjct: 122 EGWYCVGCEEFKSEMEL---AEGNSCPIHMKPCEYIREPSYFFRLSKYQDKLLELYEEHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EF+ P  RRNE+ISFVK GLKDLS++R      WGI +P D  + +YVW DAL NY++  
Sbjct: 179 EFVRPDYRRNEIISFVKQGLKDLSVTRPRSRVRWGIPVPFDEGHTIYVWFDALFNYISAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      ++WPADLH++GKDILRFH +YWPAFL S    +P+ VF+HG+   +G+K
Sbjct: 239 NGQV------DRYWPADLHIVGKDILRFHTVYWPAFLFSVGYEVPETVFAHGWWTVEGKK 292

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVI P EV+EE G+D +RYFL+RE+  G+DG + K+ +  R+N +LAN IGNL 
Sbjct: 293 MSKSLGNVISPYEVVEEYGLDEVRYFLLREVPFGQDGDFSKEAILNRINGELANEIGNLF 352

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR VSM  K   G +   G     D++   +   V++     M+    +RAL +V+ L S
Sbjct: 353 SRVVSMSKKYLGGKVEGRG-----DDAYRELAGDVVERYEGYMREVNFYRALEEVLRLSS 407

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +++Y D + PWEL K   +    VLY  V+ +  LA LL  F+P       ++L V   
Sbjct: 408 FLNKYVDEKAPWELAKRGDENLRDVLYTLVDGLFLLAYLLTPFMPNKMKLAMEMLGVE-- 465

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            R  + +       + L +    +FPR
Sbjct: 466 -RMPEEVKPFTFGSYSLGER-KILFPR 490


>gi|313682539|ref|YP_004060277.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155399|gb|ADR34077.1| methionyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 649

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 210/510 (41%), Positives = 302/510 (59%), Gaps = 13/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N + HIGHAY   IAD LAR  RL G +  F TGTDEHGQKI ++A   
Sbjct: 2   KNYITTPIYYVNGEAHIGHAYTTFIADTLARHSRLIGNETYFLTGTDEHGQKIEESAVKQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              T+ F D+ S  FR++ D  +ISYD FIRTT+  H    +  + K+ + GDIYK  Y 
Sbjct: 62  NKPTQQFADEISATFRNLWDEFNISYDQFIRTTDDAHKKGVQAAFLKMFENGDIYKDFYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ + ++    DG            ++EE YFFRLS Y+  LL YYE+HPE
Sbjct: 122 GNYCVSCETFFPESQL---MDGGCCPDCGRATTIVKEESYFFRLSKYEKPLLDYYEAHPE 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
           FILP  RRNEVISFVK GL DLS++R +F WG+ +P   ++P+++MYVW+DAL NY+T  
Sbjct: 179 FILPKSRRNEVISFVKGGLNDLSVTRTSFSWGVHLPESLNEPKHVMYVWLDALMNYVTAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D SK  FWPA++ ++GKDILRFHAIYWPAFL+S  LPLPK + +HG+    GEK
Sbjct: 239 GY--GSDESKMLFWPANVQLVGKDILRFHAIYWPAFLMSLGLPLPKHIGAHGWWTRDGEK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP EV +  GV+  RYF++RE+  G+DG + +  L  R+N+DL+N +GNL+
Sbjct: 297 MSKSKGNVVDPREVSKHYGVENFRYFMMREVPFGQDGDFSQRALIDRMNSDLSNDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R + M  K  D +I   G   +     L+    +L  +   +    +HR L ++  + +
Sbjct: 357 NRIIGMSEKYSDFVI-DSGNVAQYHAKELNDAHGILDSLETYLDELQLHRYLEELWKVFT 415

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++  +   PW   K    D A   + +   ++ + +++L A +P     I D L    
Sbjct: 416 IGNKAIEEHAPWVKIKEGRTDEALATVALVANLLAKASVMLNAIMPATTATIADALGFEI 475

Query: 482 ENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
               +++L  ++ L   F + K   P+FPR
Sbjct: 476 TTESYRNLIANKALLATFTI-KKIPPLFPR 504


>gi|218510040|ref|ZP_03507918.1| methionyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 439

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 249/435 (57%), Positives = 336/435 (77%), Gaps = 3/435 (0%)

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
            F+ MA +L+ S DDFIRTT++RHH+T R +W  +++ GDIYK  Y+GWYS+RDEAYY +
Sbjct: 2   EFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIYKDSYAGWYSVRDEAYYQE 61

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           +E    ADG  Y  Q  PV+W+EE  YFF+LS YQDKLL++YE++P+FI P ERRNEVIS
Sbjct: 62  NETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQDKLLAHYEANPDFIGPAERRNEVIS 121

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           FVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T TGY+++ +G +AK+WPA
Sbjct: 122 FVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYITATGYIEDRNGPRAKYWPA 181

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           D+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KGEK+SKSLGNV+DP+ ++ 
Sbjct: 182 DVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPVNLVN 241

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGNL SRS+SMI+K+ DG IP
Sbjct: 242 HFGLDQVRYFFLREVSFGQDGSYSEEAIGTRINSDLANGIGNLASRSLSMIVKNCDGKIP 301

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G  T+ D+++L+    +    RE+M  Q IHRALA +I++VSE DRYF  Q PW LKK
Sbjct: 302 ECGLLTDEDKAMLAQADALHASTREDMGKQQIHRALASIIAVVSETDRYFAGQAPWALKK 361

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPG 496
           T+P R  TVLYVT EV+RQ+AILLQ F+P  + K+ D++    + R F +L +  RL  G
Sbjct: 362 TDPVRMGTVLYVTAEVVRQIAILLQPFMPDSSGKLLDLVAAPADKRDFAALGEAGRLVAG 421

Query: 497 FMLHKTFDPIFPRFL 511
             L     P+FPR++
Sbjct: 422 TPLEAP-TPVFPRYV 435


>gi|225677328|ref|ZP_03788304.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590629|gb|EEH11880.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 541

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 246/544 (45%), Positives = 341/544 (62%), Gaps = 41/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D+ S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+  G            VQW++EE YFFRLS +QDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESELIDGK-----APTGAEVQWIKEESYFFRLSNWQDKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFW-------PA---------------------------DLHVIGKD 266
           + G+         +FW       PA                           ++HVIGKD
Sbjct: 236 SIGFPSTEGEEYKRFWAESKTQIPASRAGMTPNQGKTQIPVLRAANLADSSFNVHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDRDLLR 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E  L  C  +L ++ +++     ++ +  +I++ SE + Y D   PW L KT+ +R + 
Sbjct: 416 GEESLPNCKAILGQVMDHLSKYEFNQIILLIINISSEANAYIDKSAPWTLSKTDRERMNL 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505
           V+Y  +E IR +  LLQ  VPK A  I + L +  E R  +SL D  +  G  L K   P
Sbjct: 476 VIYKLLEYIRIIGTLLQPIVPKSAEMILNQLQIPKEQRDLKSLYDTCVSSGITLPKP-TP 534

Query: 506 IFPR 509
           +F R
Sbjct: 535 VFLR 538


>gi|257066998|ref|YP_003153254.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798878|gb|ACV29533.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 648

 Score =  408 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 197/515 (38%), Positives = 305/515 (59%), Gaps = 13/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI +
Sbjct: 1   MTEKKAYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLKGFDAYLTTGTDEHGQKIMR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A +AG + + FVD  +   +++   L+I YD FIR+TE +H      ++ K+ +KGDIY
Sbjct: 61  TALDAGTSPQKFVDIIAEETKELWKKLEIDYDTFIRSTEDQHEKDVAEIFTKLYEKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E ++ + ++  G            V++ EEE YFFRLS Y D+L   +
Sbjct: 121 KGEYKGYYCTPCETFWTESQLEDGH----CPDCGREVEYQEEETYFFRLSKYTDRLKELF 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEF+ P  R+ E+++     GL DLS++R +FDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KEHPEFLEPQFRQKEMLNNFIDKGLSDLSVTRNSFDWGVDVPFDNEHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY D+      ++WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL  
Sbjct: 237 SAIGYGDDKA-KFERYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  +++  GVDAL+++++RE   G DG +      +R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFYMLREFNFGSDGNFSARKYMERYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ SMI K   G +         D+ ++++      +  + M     + AL  V +
Sbjct: 356 NLVSRTTSMIAKYNGGEVRKGTVSDSFDDELITLAEETYTKFNKLMDEFNFNAALEAVWT 415

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D  +PW L +   N +R   VLY   E IR +A L++  +      I + +
Sbjct: 416 LIRRANKYVDETEPWILGRDEANKERLDRVLYNLAETIRIVAQLIEPVMKNTTATILEKI 475

Query: 478 FVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
               +N+ F+S  +   L+ G  + K  + +F R 
Sbjct: 476 GT--DNKGFESAGEFGLLEEGARVSKGAN-LFDRL 507


>gi|303326810|ref|ZP_07357252.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862798|gb|EFL85730.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 665

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 202/522 (38%), Positives = 299/522 (57%), Gaps = 28/522 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +I+T I Y NA PH+GHAY  I+AD LARFH+L G D LF TGTDEHG KI +AA+ 
Sbjct: 2   KSFFITTPIYYVNANPHLGHAYTTIVADSLARFHKLLGEDTLFLTGTDEHGDKIVQAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T K FVD  S  FR +   L I+ D F+RTT++ H  T +   +K+ D GDIY G +
Sbjct: 62  QGQTPKEFVDDISGRFRALWPQLGIANDRFVRTTDEAHKRTVQDFLQKVYDAGDIYFGEF 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G             +++ E+ YFFR+S Y   L  Y   HP
Sbjct: 122 GGHYCYGCERFYTEKELENG----LCPQHLTKPEFISEKNYFFRMSKYLPWLREYISQHP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   R+EV++ ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRSEVLAMLESGALEDLCISRPKTRLTWGIELPFDKNYVCYVWFDALINYISA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D       ++WP + H++ KDIL+ HA++WP  L +A LPL K +  HG+ L +  
Sbjct: 238 LGWPDGA--EYVRYWPGE-HLVAKDILKPHAVFWPTMLKAAGLPLYKHLNVHGYWLSRDT 294

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+DP+E     G+DA RYFL+RE+  G D  + ++ L  R+NADLAN +GNL
Sbjct: 295 KMSKSLGNVVDPLETGRRFGLDAFRYFLLREMHFGSDASFSEESLIGRINADLANDLGNL 354

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR +SM  K +   +P P      DE+++ +C+  ++   +   N    +AL  +  LV
Sbjct: 355 FSRVLSMTAKYFGSCVPQPKQREPEDEAMVELCATAMRNFSQLFGNVQFAQALESLWELV 414

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             +++Y D+Q PW L K  N +R +TV+Y+ +  +R++A+ L   +P  + ++ + L   
Sbjct: 415 RALNKYVDSQAPWALHKQGNMERLATVMYILLAAMRKVALCLWPVMPAASRRMLEQLGQP 474

Query: 479 ----------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                     + DE  CF      L  G  +  T + +FPR 
Sbjct: 475 VEEGLPPVPNLDDEIICF----GGLSAGTQVSATSN-LFPRI 511


>gi|51244638|ref|YP_064522.1| methionyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875675|emb|CAG35515.1| probable methionyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 645

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 208/512 (40%), Positives = 303/512 (59%), Gaps = 17/512 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NAQPH+GHAY  I+AD  +RF  L G DV F TGTDEHG+KI +AA+  G 
Sbjct: 4   YITTPIYYVNAQPHLGHAYTTIVADTYSRFRHLCGEDVRFQTGTDEHGEKIVEAAEKNGE 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K +VD+ S  FR    +L I  D++IRTT+  H  T + + +++ DKGDIY   Y+G 
Sbjct: 64  APKEYVDRISGMFRQTWPILGIEPDNYIRTTDANHIATVQKVLQQVYDKGDIYFDKYTGL 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E +  + E+    DG+  + Q  P +  E+  YFF++S YQ +LL +  ++ +FI
Sbjct: 124 YCRGCERFLTEKEL---VDGKCPDHQTAPQEIAEQ-NYFFKMSKYQQQLLDHINANEDFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            P   RNE++SF+   L+DL +SR      WGI++P D  ++ YVW DAL NYLT  G+ 
Sbjct: 180 TPHRYRNEMLSFLSEPLEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALINYLTGLGFP 239

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           ++   +K  FWP   HVI KDIL+ HAI+WP  L++  LPL KK+  HG+      K+SK
Sbjct: 240 EDDKYNK--FWPVAEHVIAKDILKPHAIFWPTMLMAMELPLYKKLHVHGYWNVDNTKMSK 297

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+ P E+++E G+D LRYF +RE++ G D  +  D +  R N+DLAN +GNL SRS
Sbjct: 298 SIGNVVRPKELVDEYGLDTLRYFTLREMSFGLDASFSSDAIVSRKNSDLANDLGNLFSRS 357

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +MI K   G +P P A  E+D  ++++  +V+   +E M     HRAL  V SLV   +
Sbjct: 358 TAMIQKYRGGKLPAPIA-CEADSELIALSKQVVATYKEEMGAFRFHRALQAVWSLVGYAN 416

Query: 426 RYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +Y  + +PW L K      R  TVLY   E +R LA+L++  +P  A+++   L +A + 
Sbjct: 417 KYIVSNEPWALAKDENAWQRLDTVLYNLAECLRFLALLIRPVMPDTASRMATGLGLATDA 476

Query: 484 RCFQSL----DQRLKP-GFMLHKTFDPIFPRF 510
               SL    +  + P G +L +    +FPR 
Sbjct: 477 SILNSLALGGEWGVVPVGTVLGEAIT-LFPRM 507


>gi|256830947|ref|YP_003159675.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580123|gb|ACU91259.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 648

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 201/513 (39%), Positives = 297/513 (57%), Gaps = 15/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +IST I Y NA+PH+GH Y  I+AD ++RFHRL G    F TGTDEHG KI +AA+ 
Sbjct: 2   KPFFISTPIYYVNARPHLGHGYTTIVADSVSRFHRLKGDATFFLTGTDEHGDKIVQAAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   K + D  S+ F+D+  VL++S D FIRTT+ RH    R + + + DKGDIY   Y
Sbjct: 62  AGQDPKTYSDTISQLFKDLWPVLEVSNDQFIRTTDLRHKACVRHVLQTVFDKGDIYFDEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y D E+    DG+  + Q  P  +++E+ YFFR+S Y + L  Y E++P
Sbjct: 122 GGHYCFGCERFYTDKELV---DGKCPDHQTVPT-FIKEKNYFFRMSKYLEPLREYIEANP 177

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P   RNEV+S +K  L DL +SR      WGI++P D  ++ YVW DAL NY++  
Sbjct: 178 DFIQPERYRNEVLSMLKEDLGDLCISRPKTRLTWGIELPFDSDFVTYVWFDALINYISAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D       K+W    H++ KDIL+ HAI+WP  L+SA +PL K +  HG+      K
Sbjct: 238 GYPDGE--DFRKYWSGAHHLVAKDILKPHAIFWPTMLMSAEIPLYKGLRVHGYWTVNETK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+ P+++ ++ G+ A RYFL+ E++ G+D  + +D L  R NADLAN +GNL 
Sbjct: 296 MSKSIGNVVAPLDMAQKYGLSAFRYFLLSEMSFGQDSSFSEDALVGRFNADLANDLGNLF 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SRS+SM  K + G++P  G   + D  +L +    +   +   ++    RAL  +  LV 
Sbjct: 356 SRSLSMTHKYFGGVVPECGELLDLDREVLELGHNAMSNYQSQFEHFQFSRALKSLWELVR 415

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-- 479
            +++Y D+  PW L K  + +R  TVLYV +E +R++A+ L   +P  +  +   L V  
Sbjct: 416 HLNKYIDSSAPWTLYKNKDMNRLGTVLYVILEGMRKVAVHLWPVMPSTSETMLTQLGVKF 475

Query: 480 ---ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                +     S    L PG  + +    +FPR
Sbjct: 476 SIEGTDLESETSSWFGLAPGTPVAER-SNLFPR 507


>gi|288818060|ref|YP_003432408.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787460|dbj|BAI69207.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751661|gb|ADO45144.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 211/510 (41%), Positives = 313/510 (61%), Gaps = 29/510 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  + ADVLARF+R  G  V F TGTDEHG KI K+AQ  
Sbjct: 2   KFYITTPIYYVNDVPHIGHAYTTVAADVLARFYRQRGYSVFFLTGTDEHGLKIQKSAQER 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ K   DQN+ NF+ +   ++ISYD FIRTT++ H    + ++ K  + GDIYKG Y 
Sbjct: 62  GISPKELADQNAENFKKLWKFMNISYDRFIRTTDEEHIKFVQEVFVKSYENGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E +  + E+    +G        P ++++E  YFFRLS Y+++L+  YE H +
Sbjct: 122 GWYCVGCEEFKPESEL---LEGNICPVHLKPCEYVKEPSYFFRLSKYEEELIRLYEWHKD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFD--WGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI+P  RRNEVISFVK GLKDLS++R +    WGI++P D +  +YVW DAL NY     
Sbjct: 179 FIMPEYRRNEVISFVKQGLKDLSITRPSVRVKWGIEVPFDREQTIYVWFDALFNY----- 233

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              +    +  +WPADLH++GKDILRFHA+YWPAFL+S    +PK +F+HG+   +G+K+
Sbjct: 234 --ISALYDRPHYWPADLHLVGKDILRFHAVYWPAFLMSVGYQVPKSIFAHGWWKVEGKKM 291

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVIDP +++++ G+D +RYFL+RE+  G+DG   ++GLK R+  +L+N IGNL S
Sbjct: 292 SKSLGNVIDPYKMVQDYGLDEVRYFLLREVPFGQDGDITQEGLKNRLVGELSNQIGNLFS 351

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R  SM+++  +G      A  E D S  + C  V+++    M+    + AL  V+ L + 
Sbjct: 352 RVSSMVIRYTEGK-----ASGEKDRSYEAFCGEVIKDHHHRMEKVDFYNALEAVLKLSNF 406

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +++Y D + PW L K++  +   VLY   + +  LA LL  F+P     +F+   +    
Sbjct: 407 LNKYVDEKAPWSLAKSDEKKLKDVLYTLTDGLFVLAYLLYPFMPSKMELVFESFGI---- 462

Query: 484 RCFQSLDQRLKP----GFMLHKTFDPIFPR 509
              ++L +++ P     + + +    +FPR
Sbjct: 463 ---ETLPEKIVPYSFGSYSVREKLL-LFPR 488


>gi|126656215|ref|ZP_01727599.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622495|gb|EAZ93201.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 535

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 190/524 (36%), Positives = 297/524 (56%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +K  ++T + Y N  PHIG AY  IIADV+AR+ RL G +VL  TGTDEHGQKI + 
Sbjct: 6   KKPKKFALTTPLYYVNGVPHIGSAYTTIIADVIARYKRLIGEEVLLITGTDEHGQKIQRT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +   DQ   +F+ +   LDI YD F RTT  +H    +  + ++ + GDIY 
Sbjct: 66  AQEKGLLPQDHCDQIVGSFKQLWQKLDIQYDRFSRTTATKHEAIVKEFFGRVWENGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               GWY ++ E +    E+    DG      +   +W +EE YFF+LS YQ KL   Y 
Sbjct: 126 AQQQGWYCVQCEEFKEKRELL--EDGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELYA 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE+++F+  GL+D S+SR   +WG  IP DP + +YVW DAL  Y+T 
Sbjct: 184 KNPQFIEPESRRNEILNFMNQGLQDFSISRVNLEWGFPIPKDPNHTIYVWFDALLGYVTA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               +         +++WP +LH+IGKDILRFHAIYWPA L+SANLPLP+++F HGF+  
Sbjct: 244 LLEPEEEPTLDNALSEWWPINLHLIGKDILRFHAIYWPAMLMSANLPLPEQIFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DP +++++ G D++RY+ ++EI CGKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTLDPFDLVDKYGSDSVRYYFLKEIECGKDGDFNETRFVNILNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++ M  K   G +P   A     D  + ++   + +++ +  +    +    ++
Sbjct: 364 GNLLNRTLGMTQKYCQGSLPEITASELPQDHPLKTIGLSLGEKVIKAYEKLKFNEGCEEI 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++L+   +++ D Q PW L K         +LY  +E +R  A LL   +P L++KI++ 
Sbjct: 424 LTLIQAGNKFIDEQAPWRLFKEGKQAEVEKILYGVLESVRLAAYLLAPIIPNLSSKIYEQ 483

Query: 477 LFVADENRCFQSLDQRLKPGF----------MLHKTFDPIFPRF 510
           L  + +       ++ +                     P+F + 
Sbjct: 484 LGFSVDFNQSDRFNEVVPFAHHSQWGKLAVNQGLSKPQPVFAKL 527


>gi|227501185|ref|ZP_03931234.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216586|gb|EEI81990.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 645

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 198/514 (38%), Positives = 307/514 (59%), Gaps = 11/514 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YPN+  HIG+ Y  +IADVL R+  L G D   TTGTDEHGQKI K
Sbjct: 1   MTEKKPYYITTPIYYPNSNLHIGNTYTSVIADVLKRYKNLLGYDTFLTTGTDEHGQKIMK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +AQ+AGV  + FVD+ +    ++   L+I YD FIR+TEK+H +  + ++ K+ ++GDIY
Sbjct: 61  SAQDAGVNPQAFVDKIASETIELWKKLEIDYDRFIRSTEKQHEEDVKNIFTKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E ++ + ++  G            V + EEE YFFRLS Y D+L   +
Sbjct: 121 KGEYKGYYCTPCETFWTEAQLEDGK----CPDCGRDVDYQEEETYFFRLSKYTDRLKELF 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEF+ P  R+ E+++     GL DLS++R +FDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KDHPEFLEPAFRQKEMLNNFIDKGLSDLSVTRNSFDWGVDVPFDNEHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  G+ D+ +    K+WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL  
Sbjct: 237 SAIGFGDDKE-KFEKYWPAGVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFD 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  +++  GVDAL++F++RE   G DG +      +R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVDLYGVDALKFFMLREFNFGSDGNFSAKKFMERYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ SMI K   G++         D+ ++++ S    +  + M     + A+  +  
Sbjct: 356 NLVSRTTSMIDKYNGGVVRKGTVSDSFDDELIALSSETYSKFNKLMNEFNFNAAIEAIWV 415

Query: 420 LVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D  +PW L +   N +R   VLY   E IR +A L++  +     +I + +
Sbjct: 416 LIRRANKYVDETEPWILGRDEANKERLDRVLYNLAETIRIVAQLIEPVMKNTTREILEKI 475

Query: 478 FVADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
               +N+ F+S  +  L            +F R 
Sbjct: 476 GT--DNKGFESAGKFGLLEENARVSKGKNLFDRL 507


>gi|255322574|ref|ZP_05363719.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300482|gb|EET79754.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 639

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 200/507 (39%), Positives = 307/507 (60%), Gaps = 10/507 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  +IAD +ARF RL G D  F TGTDEHGQKI +AA   G 
Sbjct: 5   YITTPIYYVNDVPHIGHAYTTVIADTVARFARLKGDDTYFMTGTDEHGQKIEQAAAKKGY 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  FR++ D  +ISYD FIRTT+  H  T +  + K+  KGDIYKG Y G+
Sbjct: 65  TPQAYADEISAKFRELWDKFEISYDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGEYEGY 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    + +       P   ++EE YFF+LS YQD LL +YE + + I
Sbjct: 125 YCVSCESFFTQTQL---LEDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENEDCI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++NEV+SFVK GL+DLS++R +F+WGIK+P   ++P+++MYVW+DAL NYL+T GY
Sbjct: 182 VPRGKKNEVVSFVKGGLRDLSITRTSFEWGIKLPASLNEPRHVMYVWLDALINYLSTLGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                  K  +W    H++GKDILRFHA+YWPAFL+S +LPLP+ V +HG+    GEK+S
Sbjct: 242 --TRGDDKMNYWKGATHIVGKDILRFHAVYWPAFLMSLDLPLPRCVAAHGWWTRDGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P EV +  G++  RYF++RE+  G+DG + +  + +R+N++L+N +GNL+SR
Sbjct: 300 KSKGNVINPSEVADAYGLENFRYFMLREVPFGQDGDFSQKAMIERINSELSNDLGNLLSR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            V M  K  D  I       +    +L   +  LQ   +N+++   +R L ++   ++  
Sbjct: 360 IVGMSEKYSDFEI-KGENLRKFYGEVLDSGNEYLQNAIKNLESFATNRYLEELFKALTLA 418

Query: 425 DRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K+   D A+ ++ +   ++ ++A+LL   +P+   KI   L      
Sbjct: 419 NASIAKFEPWNLMKSGKKDEANALVSLCANLLARVAVLLSPAMPRTCEKIAQTLGFEIST 478

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++ +    +      +   P+FP+ 
Sbjct: 479 ATYEKIILNNEILDFKAQKTQPLFPKI 505


>gi|307151236|ref|YP_003886620.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306981464|gb|ADN13345.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 533

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 199/523 (38%), Positives = 298/523 (56%), Gaps = 17/523 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
             +K  ++T + Y N  PHIG AY  +IADV+AR+ RL G  V+F TGTDEHGQKI + A
Sbjct: 7   SNKKFALTTPLYYVNDVPHIGSAYTTMIADVIARWKRLQGYSVMFITGTDEHGQKIQRTA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+  +   DQ   +F  + D L+I YD F RTT K H    +  ++++ D+GDIY  
Sbjct: 67  EAKGLAPQEHCDQIVTSFESLWDKLNIHYDRFSRTTAKPHQSIVKEFFQRVWDQGDIYLD 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              GWY +  E +  + E+    +G      +   +W +EE YFFRLS YQ KL  +Y  
Sbjct: 127 QQIGWYCVACEEFKEERELT--ENGSCQIHTNLKAEWRDEENYFFRLSKYQQKLAEFYAE 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            PEFI P  RRNEV+SF+K GL+D S+SR   DWG  +P DP + +YVW DAL  Y+T  
Sbjct: 185 KPEFIRPESRRNEVLSFLKQGLQDFSISRVNLDWGFPVPSDPNHTIYVWFDALLGYITAL 244

Query: 243 GYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              ++    K   +++WP +LH+IGKDILRFHAIYWPA L+SA LPLP++VF HGF+   
Sbjct: 245 LDPNDEPTLKNALSRWWPINLHLIGKDILRFHAIYWPAMLMSAGLPLPEQVFGHGFLTKD 304

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN +DP +++     DA+RY+ ++EI  GKDG +++      +NADLAN +G
Sbjct: 305 GLKMGKSLGNTLDPFDLLNRYSADAVRYYFIKEIEFGKDGDFNETRFVNILNADLANDLG 364

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR-VLQEIRENMQNQLIHRALAQVI 418
           NL++R++ M+ K   G  P   A    + + L +    + + +RE ++    ++A  ++ 
Sbjct: 365 NLLNRTLGMVQKYCKGKGPALKATEIDNNNPLKIIGEGLSERVRECLEALKFNQACEEIF 424

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           SL+   +++ D   PW L K         +LY  +E +R  A LL   +P L+ +I+  L
Sbjct: 425 SLIRACNKFIDESAPWSLYKEKKQAEVEEILYAVLESVRLAAYLLSPIIPNLSTRIYQQL 484

Query: 478 FVADENRCFQSLDQRLK----------PGFMLHKTFDPIFPRF 510
             + +   F+ +++             PG       +PIF + 
Sbjct: 485 GFSVDFNDFELVNRNFSFKDQTKWGNFPGNPNLSKPEPIFTKL 527


>gi|71083692|ref|YP_266412.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062805|gb|AAZ21808.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 513

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 231/508 (45%), Positives = 342/508 (67%), Gaps = 4/508 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+A+PH+GHAY  I+AD  ARF R+DG +V F TGTDEHG KI +AA+ 
Sbjct: 3   KNYYITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAAER 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + F D+ S+ FRD++  L++S  DFIRTTE+RH  T + LW ++    DIY   Y
Sbjct: 63  KKIDPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+ DEAYY+D+E+ +  + +   +  + V+W+EEE YFFRLS +QD+LL YYE +P
Sbjct: 123 SGWYSVSDEAYYSDEEISEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEKNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  R+NEVISFVK GLKDLS+SRK F WGIK+P+   +++YVW+DALTNYL+   Y
Sbjct: 183 DFISPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYLSALNY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D    KFWPA +H+IGKDILRFH++YWPAFL++A +PLPKKV+ HG+IL   EK+S
Sbjct: 243 PDTNDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN++DP+++IE  G+D LRY+L++E++ G DG   +D L+  +N+DLAN  GNL  R
Sbjct: 303 KSKGNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLCQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +   K+   ++P    F + D  +L+  +  L  IR  + NQ I+  +  ++S + E 
Sbjct: 363 VTAFAEKNCSSLVPDNTKFNDEDLVMLNKFTDNLDLIRTEIDNQNINYYINFIVSALFEA 422

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++YF+ Q+PW+ KK + DR +T++Y ++E+IR+++ +L   +P    K   I  +  +  
Sbjct: 423 NKYFNDQEPWK-KKDDKDRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIFNLNIDAI 481

Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
             +S+ +   L  G  ++K  D +F + 
Sbjct: 482 NLESIAKHDYLISGKPINK-IDILFKKI 508


>gi|78777263|ref|YP_393578.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497803|gb|ABB44343.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 644

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 203/508 (39%), Positives = 305/508 (60%), Gaps = 13/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N + HIGHAY   IAD LAR+ +L G D  F TGTDEHGQKI ++AQ    
Sbjct: 4   YITTPIYYVNGEAHIGHAYTTFIADTLARYEKLKGEDTYFLTGTDEHGQKIEESAQKNSK 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T+ F D+ S +F+++ D  DISYD FIRTT+  H    +  ++ +  KGDIYK  Y G 
Sbjct: 64  PTQEFADEISASFKNLWDEFDISYDKFIRTTDAEHKKGVQRAFEVMYAKGDIYKDFYEGH 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E ++ + ++  G          N V   +EE YFFRLS Y++ LL +YE +P+FI
Sbjct: 124 YCVSCETFFTETQLVDGEFCPDCGRSTNIV---KEESYFFRLSKYENALLKHYEENPDFI 180

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  R NEVI+FVK GL+DLS++R +F WG+ +P+   D +++MYVW+DAL NY+T  GY
Sbjct: 181 LPRSRANEVINFVKGGLRDLSVTRTSFTWGVGMPNSIKDDKHVMYVWLDALMNYITALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                    ++WPA +  +GKDILRFHAIYWPAFL+S +LPLP+ + +HG+    GEK+S
Sbjct: 241 --GTTEENMRYWPASVQFVGKDILRFHAIYWPAFLMSIDLPLPQHIGAHGWWTRDGEKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI P +V +  GV+ LRYF++RE+  G+DG + +     R+N++L+N +GNL++R
Sbjct: 299 KSKGNVISPKQVADVYGVENLRYFMLREVPFGQDGDFSQRAFIDRINSELSNDLGNLLNR 358

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K  D  I +        + I    + VL  +   M+N   HR L ++  L S  
Sbjct: 359 IIGMSGKYSDFEIESVNVLKYHKKEI-DAMNVVLDSLDIFMKNFQTHRYLEELWKLFSIG 417

Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++  +   PW ++K    D A + + +   ++ + +I+L   +P+  + I D L  +  +
Sbjct: 418 NKAIEEHAPWVKMKDGKKDEALSTVALVANILAKASIMLHPVMPRTTDIIADALNFSISH 477

Query: 484 RCFQSL--DQRLKPGFMLHKTFDPIFPR 509
             ++ L  +++L   F + K   P+FPR
Sbjct: 478 ESYRELVQEKKLLKLFNI-KPVPPLFPR 504


>gi|284046700|ref|YP_003397040.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950921|gb|ADB53665.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 501

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 195/506 (38%), Positives = 290/506 (57%), Gaps = 11/506 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             Y++T I Y NAQPH+GHAY  I ADVLAR  R  G DV F TGTDEHG+ +A AA   
Sbjct: 2   PYYVTTPIYYVNAQPHLGHAYTTIAADVLARHMRQRGEDVFFLTGTDEHGEPVALAADRL 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   D+N+  F +M   L++S D FIRT++ RH    + + ++I D G  Y G Y 
Sbjct: 62  GLAPKELADRNAARFEEMMPRLNVSNDFFIRTSDPRHVKKVQEVMQRIHDNGHTYLGTYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GW+  R   +  ++E+    +G      H P+   +EE +FFRLS +Q+ L   Y   P+
Sbjct: 122 GWFCPRCADFKGENEIA---EGNTCPIHHIPLDREKEENWFFRLSTFQEPLERLYAEQPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           +  P  RRNE ++F++SGL+D+SLSR  F WG+ +  DP ++ YVW DAL NY T   + 
Sbjct: 179 WAAPPTRRNEALAFIRSGLRDVSLSRGKFTWGVPVTWDPSHVFYVWFDALLNYYTALSFA 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              +    +FWPADLHVIGKDIL+FHA+YWPA L++A+LPLP++   HG++L  GEK+SK
Sbjct: 239 REGEDLTERFWPADLHVIGKDILKFHAVYWPAMLMAADLPLPRREMIHGYLLMDGEKMSK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+DP EVI+  G DALRY+ +RE++ G+DG     G + R  ++LAN  GNL SR+
Sbjct: 299 SLGNVLDPFEVIDRFGTDALRYYCLREVSFGQDGSVSTAGFESRYESELANEYGNLASRT 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++M+ +  DG++P              VC     ++   +      +AL  +   V  ++
Sbjct: 359 LAMVARYRDGVVPAVATDAALAADFAGVC----DDVAALLDKAEPSQALEAIWQRVRRLN 414

Query: 426 RYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           RY + + PW+L +      +    L    E +R + +LL  ++P+ A+K    L   + +
Sbjct: 415 RYVEERAPWKLARDPAAAGQLDETLATLAEGLRVVTVLLHPYIPESADKALAALNRPELD 474

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
                       G    +  +P+FP+
Sbjct: 475 FDGARFASEGWGGT--VEKIEPLFPK 498


>gi|58584456|ref|YP_198029.1| methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418772|gb|AAW70787.1| Methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 540

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 245/545 (44%), Positives = 339/545 (62%), Gaps = 41/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T I Y N +PHIGHAY  +I DV ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPIYYVNDKPHIGHAYTSLICDVTARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  K F D+ S +FR +A+ +D  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKTKGMHPKEFTDKVSVSFRKLAEFIDFQYDDFIRTTEERHEKAVVALWDRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+ DEA+Y + E+  G            V+W++EE YFFRLS++Q+KLL  Y
Sbjct: 121 LDSYSGWYSVSDEAFYQESELIDGK-----APTGAEVEWVKEESYFFRLSSWQNKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  R+NEVISFVKSGL DLS+SR +F+WGIK+P + ++I+YVW+DALTNYLT
Sbjct: 176 KNQPNFIFPESRKNEVISFVKSGLTDLSISRISFNWGIKVPRNDKHIIYVWVDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266
           + G+ +  +    KFW                                    ++HVIGKD
Sbjct: 236 SIGFPNTENEEYKKFWAESQSVIQVADTWIQKEIQISASRARMTSNLADNSFNIHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++G+KISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIVVHGWWLNEGKKISKSLGNVIDPIALAKEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKRCFGVVPTVDKSLLK 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
            E  L     +  ++ +++     +  +  +I++ SE + Y D   PW L KT+ +R + 
Sbjct: 416 GEEGLPNYRAIFNQVMDHLSKYEFNHIILLIINISSEANAYIDKSAPWILSKTDRERMNL 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDP 505
           V+Y  +E IR + ILLQ  VP+ A  I D L +  E R  +SL    +  G  LHK   P
Sbjct: 476 VIYKLLEYIRIIGILLQPIVPRPAEVILDQLQIPKEQRDLKSLCGAYVSSGTTLHKP-TP 534

Query: 506 IFPRF 510
           +F R 
Sbjct: 535 VFLRI 539


>gi|218248716|ref|YP_002374087.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257061779|ref|YP_003139667.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218169194|gb|ACK67931.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591945|gb|ACV02832.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 535

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 205/521 (39%), Positives = 304/521 (58%), Gaps = 19/521 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  ++T + Y N  PHIG AY  +IADV+ARF RL G  VL  TGTDEHGQKI + A+  
Sbjct: 10  KFALTTPLYYVNDVPHIGSAYTTMIADVIARFKRLQGSSVLLITGTDEHGQKIERTAEAK 69

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +   D+   +F  +   L+I YD F RTT K H    +  ++++ ++GDIY     
Sbjct: 70  GLEPQEHCDRIVESFESLWQKLNIQYDRFSRTTAKNHGAIVKEFFQRVWEQGDIYLAQQQ 129

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E +    E+    DG      +   +W +EE YFFRLS YQ+KL + Y+ HPE
Sbjct: 130 GWYCVPCEEFKEKRELL--EDGCCPLHPNKKAEWRDEENYFFRLSNYQEKLETLYQEHPE 187

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEVISFV  GL+D S+SR    WG  +P D  + +YVW DAL  Y+T     
Sbjct: 188 FIEPESRRNEVISFVSGGLQDFSISRVNVAWGFPVPGDDNHTIYVWFDALLGYITALLEP 247

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           D   G +   +++WP +LH+IGKDILRFHA+YWPA L+SA LPLPK++FSHGF+   G+K
Sbjct: 248 DQEAGLENALSQWWPINLHLIGKDILRFHAVYWPAMLMSAKLPLPKQIFSHGFLTKDGQK 307

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN ++P +++E  G DA+RY+ ++EI CG+DG +++      +NADLAN +GNL+
Sbjct: 308 MSKSLGNTVNPFDLVERYGSDAVRYYFLKEIDCGRDGDFNETRFVNVLNADLANDLGNLL 367

Query: 363 SRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R++ MI K   G+IP       + + S+ S+   +   + +  +    ++A  ++++L+
Sbjct: 368 NRTLGMIKKYCQGVIPPLIIEELALEHSLKSIGLELGDRVTQAYETLRFNQACEEILTLI 427

Query: 422 SEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              +++ D Q PW L K    +   ++L   +E +R  A LL   +P L+NK++  L ++
Sbjct: 428 RASNKFIDEQAPWRLFKQGQQKEVESILAAVLESVRLSAYLLSPIIPNLSNKVYQQLGLS 487

Query: 481 ---------DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
                     E   F   S   +LK    L +   PIF R 
Sbjct: 488 VDFNEGDRLQETAPFAQHSQWGKLKVNQTLTEA-QPIFARL 527


>gi|328950695|ref|YP_004368030.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451019|gb|AEB11920.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 632

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 214/510 (41%), Positives = 302/510 (59%), Gaps = 12/510 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++T I Y NA+PHIGHAY  I+AD LAR+HRLDG D  F TGTDEHG+KIA+AAQ 
Sbjct: 3   KTFYVTTPIYYVNAEPHIGHAYTTIVADYLARWHRLDGYDTYFLTGTDEHGEKIAQAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  K FVD+ S  FR+    L I+YDDFIRTTE+RH    R + +K+ D GDIY G Y
Sbjct: 63  AGLEPKAFVDRVSARFREAWAALGIAYDDFIRTTEERHKAVVRAVLQKVYDAGDIYYGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  + E+  G           P +  +E  YFFR+  Y+  L ++ E HP
Sbjct: 123 EGLYCVGCERFLTEKELVDG----RCPDHGVPPERRQEGNYFFRMEKYRPWLRAFIEQHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EFI P   RNEV++ +   + DLS+SR      WGI++P DP ++ YVW DAL NY++  
Sbjct: 179 EFIRPERYRNEVLAMLAEPIGDLSISRPKRRVPWGIELPWDPDHVTYVWFDALLNYVSAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
           GY ++P     ++WPA  H+IGKDIL+ HA++WPA L SA +PL + +   G++L   G 
Sbjct: 239 GYPEDPR--FERYWPAAQHLIGKDILKPHAVFWPAMLKSAGIPLYRHLNVGGYLLGPDGR 296

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P E+ E+ G DA+RY+L+RE+A G+DG   + GL  R NADLAN +GNL
Sbjct: 297 KMSKSLGNVVNPFELAEKYGTDAVRYYLLRELAYGQDGAVSESGLVDRYNADLANDLGNL 356

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+ +M+LK   G++P        D+ ++   + +   +R  +Q    H+AL +V+   
Sbjct: 357 VQRTRTMLLKYLGGVLPK-AEPAPEDQPVVEAATTLAARVRPLVQELRFHQALEEVLQFT 415

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             ++RY +  KPWEL K      R   VLY  VE IR  +ILL+  +P  A +I     +
Sbjct: 416 RLLNRYVNEHKPWELAKDPARKPRLEQVLYAVVEGIRIASILLEPAMPTKAREIRAAFAL 475

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            D              G  +      +FP+
Sbjct: 476 GDGTLADTETWGVAPAGTRIPAEAPILFPK 505


>gi|58698674|ref|ZP_00373565.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630227|ref|YP_002727018.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|58534805|gb|EAL58913.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592208|gb|ACN95227.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 548

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 244/547 (44%), Positives = 337/547 (61%), Gaps = 44/547 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D  S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDDVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+  G            VQW++EE YFFRLS +QDKLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESELIDGK-----APTGAEVQWIKEESYFFRLSNWQDKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA-------------------------------------DLHVI 263
           + G+         +FW                                       ++HVI
Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSTGMTPNLADNSFNVHVI 295

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD
Sbjct: 296 GKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRYFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT    
Sbjct: 356 QLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQI 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
               E  L  C  +L ++  ++     +  +  +I++ SE + Y D   PW L KT+ +R
Sbjct: 416 LLKGEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRER 475

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKT 502
            + V+Y  +E IR + ILLQ  VPK A  I + L +  E R  +SL +  +  G  L K 
Sbjct: 476 VNLVIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQRDLKSLCNACVSLGITLPKP 535

Query: 503 FDPIFPR 509
             P+F R
Sbjct: 536 -TPVFLR 541


>gi|311743181|ref|ZP_07716989.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313861|gb|EFQ83770.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 529

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 208/525 (39%), Positives = 306/525 (58%), Gaps = 21/525 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y++T I Y N  PHIGH Y   I DVLAR+HR  G  V + TG DEHGQK+ + A  
Sbjct: 4   PTFYVTTPIYYVNDAPHIGHGYTTTIGDVLARWHRQRGEQVHYLTGVDEHGQKVLRKAAA 63

Query: 65  AGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           AGV+ + +VD+     ++ M   +D S DDFIRTTE RH    +  W+++++ G +Y+G 
Sbjct: 64  AGVSPQDWVDRLVETEWKPMLATIDASNDDFIRTTEPRHARGVQAFWERLNEAGAVYRGE 123

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           +SGWYS+  E +  DD+V  G       +      + V+ + E  YFFRLS +Q +LL +
Sbjct: 124 FSGWYSVGSEEFVGDDDVRDGEGDDAGHRVSVLDGSRVEHVTEANYFFRLSDFQQRLLDF 183

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y++HP+F+ P   RNEV+SFV  GL DLS+SR TFDWGI +P D  +I YVWI+AL NY+
Sbjct: 184 YDAHPDFVQPASARNEVVSFVSRGLTDLSISRSTFDWGIPVPWDDDHIFYVWIEALLNYV 243

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  +      + WPADLH++GKDI+RFHAI WPA L++A LP+P +VF+HG+IL  
Sbjct: 244 TAVGYGQDEAR-FDRLWPADLHIVGKDIVRFHAIIWPAMLMAAGLPVPHRVFAHGWILVG 302

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS  N I P ++++  G DA RY+  R +  G DG    + +  R +A+LANG G
Sbjct: 303 GQKMSKSKANGIHPDQIVQTFGSDAYRYYFTRALTFGNDGSISWEDIGARYHAELANGFG 362

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL SR  +MI K + G++P  GA   ++ +I+      + +    +     H A+A V  
Sbjct: 363 NLASRVAAMIGKYHGGVLPPAGAGGAAEATIVDGVVGAVADAEAAIDAVAPHDAVAAVWR 422

Query: 420 LVSEVDRYFDAQKPWEL-------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +V +++ Y   Q PW +        +   +R +T+L    E +R LA+LL   +PK    
Sbjct: 423 VVDDLNGYVTDQAPWTVAKAAADGDEAAAERLATILVTLAEGLRALAVLLHPVMPKATAV 482

Query: 473 IFDILF-------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++D L        +AD+     +   +L  G  + K+ D +FPR 
Sbjct: 483 LWDSLGAGDAIGPLADQRVADVARWGQLPAGTRVVKS-DALFPRI 526


>gi|223039853|ref|ZP_03610137.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878862|gb|EEF13959.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 639

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 200/507 (39%), Positives = 306/507 (60%), Gaps = 10/507 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PHIGHAY  +IAD +ARF RL G D  F TGTDEHGQKI +AA   G 
Sbjct: 5   YITTPIYYVNDVPHIGHAYTTVIADTVARFARLKGDDTYFMTGTDEHGQKIEQAAAKKGY 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  FR++ D  +ISYD FIRTT+  H  T +  + K+  KGDIYKG Y G+
Sbjct: 65  TPQAYADEISAKFRELWDKFEISYDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGEYEGY 124

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    + +       P   ++EE YFF+LS YQD LL +YE + + I
Sbjct: 125 YCVSCESFFTQTQL---LEDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENEDCI 181

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++NEVISFVK GL+DLS++R +F+WG+K+P   ++P+++MYVW+DAL NYL+T GY
Sbjct: 182 VPRGKKNEVISFVKGGLRDLSITRTSFEWGVKLPASLNEPKHVMYVWLDALINYLSTLGY 241

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                  K  +W    H++GKDILRFHA+YWPAFL+S +LPLP+ V +HG+    GEK+S
Sbjct: 242 --TRGDDKMNYWKGATHIVGKDILRFHAVYWPAFLMSLDLPLPRCVAAHGWWTRDGEKMS 299

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P EV +  G++  RYF++RE+  G+DG + +  + +R+N++L+N +GNL+SR
Sbjct: 300 KSKGNVINPSEVADAYGLENFRYFMLREVPFGQDGDFSQKAMIERINSELSNDLGNLLSR 359

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            V M  K  D  I       +    +L   +  LQ   +N+++   +R L ++   ++  
Sbjct: 360 IVGMSEKYSDFEI-KGENLRKFYGEVLDSGNEYLQNAIKNLESFATNRYLEELFKALTLA 418

Query: 425 DRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K    D A+ ++ +   ++ ++A+LL   +P+   KI   L      
Sbjct: 419 NASIAKFEPWNLMKNGKKDEANALVSLCANLLARVAVLLSPAMPRTCEKIAQTLGFEIST 478

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++ +    +      +   P+FP+ 
Sbjct: 479 ATYEKIILNNEILDFKAQKTQPLFPKI 505


>gi|149195308|ref|ZP_01872396.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134572|gb|EDM23060.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 204/520 (39%), Positives = 309/520 (59%), Gaps = 19/520 (3%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ++    Y++T I Y N  PHIGHAY  IIAD +AR+ RL G+D  F TGTDEHGQKI 
Sbjct: 1   MSDKCNTYYLTTPIYYVNDVPHIGHAYTTIIADTIARYSRLKGIDTFFLTGTDEHGQKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA+  G + K + D+ S  F+++ D  +ISYD FIRTT++ H    +  + ++  KGDI
Sbjct: 61  EAARKKGKSPKEYADEISAKFKELWDEFEISYDKFIRTTDEAHKRGVQKAFLEMYKKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  E++    ++    + +       P + ++EE YFFRLS YQDK+L +
Sbjct: 121 YKDYYEGHYCVSCESFIAPSQL---VNDELCPDCGKPTRIIKEESYFFRLSKYQDKILDW 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALT 236
            ++    ILP  + NEVI FV+ GLKDLS++R +F+WG+K+P   +D ++++YVW+DAL 
Sbjct: 178 LKNKKP-ILPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPDEINDKKHVVYVWLDALF 236

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT  GY    +    K+WPA LH++GKDIL+FHA+YWPAFL+S    LPKK+ +HG+ 
Sbjct: 237 NYLTALGYGSEDESLVKKYWPAKLHIVGKDILKFHAVYWPAFLMSIGYELPKKIAAHGWW 296

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKS GNVIDP EV +  G++  RYFL+RE+  G DG + +  L  R+N DL N
Sbjct: 297 TRDGEKMSKSKGNVIDPKEVADAYGIENFRYFLLREVPFGADGDFSEKALIDRINNDLGN 356

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-----NQLIH 411
            +GNL++R + M  K +DG + +     + ++   S  +   +EI +N++        IH
Sbjct: 357 DLGNLLNRIIGMAYKYFDGKVTS----RDVEKYFSSELNEA-REIIKNLEETYLWKMQIH 411

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + L ++  ++S  ++  D  KPWEL K     +A+ ++ +   ++   +I L A +PK  
Sbjct: 412 KFLEELWKVLSIGNKAIDTYKPWELMKNGETQKAAALIGLIANLLALTSINLHAVMPKTT 471

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            KI   L        F  L +       + +   P+FP+ 
Sbjct: 472 QKIASSLGFEINPNSFNELMEGKLLDDFVIEKIPPLFPKI 511


>gi|166367026|ref|YP_001659299.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089399|dbj|BAG04107.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 537

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 200/529 (37%), Positives = 295/529 (55%), Gaps = 21/529 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ER+   ++T + Y N  PHIG AY  I+ADV+AR+ RL G  VL  TGTDEHGQKI +
Sbjct: 4   LNERKTFALTTPLYYVNDIPHIGSAYTTIVADVMARWQRLQGNSVLLITGTDEHGQKIER 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+  +   D+ + +F ++   L I YD F RTT  RH       ++++ +KGDIY
Sbjct: 64  TAAAKGLNPQEHCDRIATSFANLWAKLHIQYDRFSRTTAPRHQAIVNEFFERVWEKGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY +  E +    E+    +G      +   +W +EE YFFRLS YQ +L  +Y
Sbjct: 124 LDRQQGWYCVACEEFKEKRELL--DNGCCPIHTNLAAEWRDEENYFFRLSKYQTQLEQFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +  P+FI P  RRNEV++FV  GL+D S+SR    WG  IP D Q+ +YVW DAL  Y+T
Sbjct: 182 QEQPDFIQPESRRNEVLNFVNQGLQDFSISRVNVAWGFPIPHDGQHTIYVWFDALLGYVT 241

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                ++    +   AK+WP DLH+IGKDILRFHAIYWPA L+SA LPLPK+VF HGF+ 
Sbjct: 242 ALLDPEDEPTLENALAKWWPIDLHLIGKDILRFHAIYWPAMLMSAGLPLPKRVFGHGFLT 301

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN +DP ++++  G DA+RY+ V+EI  G+DG + +      +NADLAN 
Sbjct: 302 KDGRKMGKSLGNTLDPFDLVDRYGADAVRYYFVKEIELGQDGDFQETRFVNILNADLAND 361

Query: 358 IGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R++ M+ K    + P   G    +D  + ++   +   + +       ++A  +
Sbjct: 362 LGNLLNRTLGMVKKYCQNIPPQLTGVDIPNDNRLKNMGINLGGIVEQKYDALQFNQACEE 421

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++L+   +++ D   PW L K     A   VLY  +E +R  A LL   +P L++KI+ 
Sbjct: 422 ILALIRASNKFIDESAPWSLFKQKQQAAVEQVLYAVLESVRLSAYLLSPIIPTLSSKIYQ 481

Query: 476 ILFVADENRCFQSLDQRLKPGFM--------------LHKTFDPIFPRF 510
            L    +   F+S D    P  +                 T +PIF + 
Sbjct: 482 QLGFVIDFNTFRSEDGEDPPDGVSFSQHCQWGLPTNPQLGTPEPIFSKL 530


>gi|58617532|ref|YP_196731.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58417144|emb|CAI28257.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 506

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 232/511 (45%), Positives = 326/511 (63%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             +Y++T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQKI KAA  
Sbjct: 2   RNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  +   F D  S  F+ +  V++ S+DDFIRTTE RH      LW+++   G IY G Y
Sbjct: 62  ANKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWY++RDE +Y + E+  G            V+W+EE  YFFRLS +Q++LL +Y+ HP
Sbjct: 122 SGWYAVRDETFYQEKELIDGK-----APTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHP 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI+P  R NEVISFVKSGLKD+S+SR+   WGI +P+D  +I+YVWIDALTNYLTT G+
Sbjct: 177 NFIIPRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGF 236

Query: 245 LDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +        +W       +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+  ++G
Sbjct: 237 PEINSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGNVI+P E+IEE GVD +RYFL++E+  G DG Y ++ +   +N DLAN IGN
Sbjct: 297 QKISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+VS++ K+  G IP   +    DE  L     +L+ +R  +    ++  +  V  L
Sbjct: 357 LVQRTVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGVIHIVEEL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            S  + Y   + PW+L KT+P     VLY  +E IR + +LLQ  +P L++KI D + ++
Sbjct: 417 SSMANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALS 476

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +    +  G +L K  +PIF + +
Sbjct: 477 EYKRSFNNFAVPIDTGIILPKP-EPIFTKII 506


>gi|317490262|ref|ZP_07948750.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910756|gb|EFV32377.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 529

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 207/519 (39%), Positives = 296/519 (57%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +     +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A
Sbjct: 2   SKGTYSFTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G+T + + D     FRD  D+L I+Y DF+RTTE RH  T +  W+ + D+G  YKG
Sbjct: 62  ADKGMTPQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHARTVQKFWQDLYDRGWCYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYY 180
            Y GWY + +E YY + ++ K  DG+        PVQ    EE +FF+LS + DKLL++Y
Sbjct: 122 SYEGWYCVHEETYYAESDLEKNEDGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT
Sbjct: 182 EENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLT 241

Query: 241 TTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY D  +        WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L 
Sbjct: 242 GIGYGDEGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLT 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KGEK+SKS GN + P ++ +  GVDA RY+ + ++  G DG    + + +  NADLAN  
Sbjct: 302 KGEKMSKSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTW 361

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL SR  +M  K +DG +P  P     ++  + ++   +  E    +       A A V
Sbjct: 362 GNLCSRVFNMTKKYFDGQVPEVPAEVLANENPLRAITEELYAEYDAALGAVDFTAAAAAV 421

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L   V+ Y +   PW L K+       + V+Y  +E IR +A+ +  F+P  + ++F 
Sbjct: 422 QKLAGRVNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFR 481

Query: 476 ILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L + D     +    +   +L  G  + +  DP+FPR 
Sbjct: 482 RLSLGDIEAVTDIEAATAWGQLPAGNPV-EIGDPLFPRL 519


>gi|302341677|ref|YP_003806206.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638290|gb|ADK83612.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 656

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 197/511 (38%), Positives = 300/511 (58%), Gaps = 13/511 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y NA+PH+GHAY  I+ADV  RFH L G      TGTDEHG KIA+AA   
Sbjct: 4   TFYITTPIYYVNAEPHLGHAYTTIVADVARRFHLLLGQTARMQTGTDEHGDKIAEAAAKN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ + + D+ S  FRD+   L I YD F+RTT+ +H  T R L +K+ D+GDIY   Y 
Sbjct: 64  GLSPRQYADRVSGLFRDLWPHLHIQYDRFVRTTDPQHIQTVRALLQKVHDQGDIYFAKYG 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E +  D E+    +G+  +    PV ++EEE YFFR+  YQ  L+ + +++P+
Sbjct: 124 GNYCVACERFLTDKELV---EGKCPDHHTEPV-YIEEENYFFRMGKYQQALIEHIQANPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   +NEV+S +   L DL +SR      WG+++P D  ++ YVW DAL NY+T   
Sbjct: 180 FIRPERYKNEVLSMLAEPLDDLCISRPKSRLTWGVELPFDQNFVTYVWFDALINYITGLD 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y +      A+FWP   H+I KDIL+ HAI+WP  L++  LPL +++  HG+      K+
Sbjct: 240 YPNGD--DFARFWP-GQHLIAKDILKPHAIFWPTMLMAMGLPLYQRLNVHGYWNVDQAKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+ P+E+ +  GVDA RYFL+RE+A G D  + ++ L +R NADLAN +GNL S
Sbjct: 297 SKSLGNVVRPLELAQVYGVDAFRYFLLREMAFGLDAGFSEELLIQRYNADLANDLGNLYS 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R ++M++K ++G++P PG  T +DE +  V ++    +R+  +    H+ LA++  L+  
Sbjct: 357 RVLNMLVKYHNGVVPQPGPLTPADEELAQVAAQARDGLRQGFEAFAFHKGLARLWELIGA 416

Query: 424 VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y  A +PW L        R + V++  V  + Q+A+L+   +P++A  +   + +A 
Sbjct: 417 ANKYVVANEPWALAAQPEQAPRLARVMHELVRTLAQVAVLIWPVMPEMAETMAGHMGLAH 476

Query: 482 ENR-CFQSLD-QRLKPGFMLHKTFDPIFPRF 510
             R     L+   L P   +      +FPR 
Sbjct: 477 PARIGLAGLESDALTPAGTVIAKPATLFPRI 507


>gi|308271750|emb|CBX28358.1| Methionyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 640

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 199/517 (38%), Positives = 296/517 (57%), Gaps = 19/517 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA+PH+GHAY  IIADV+ R++ + G D    TGTDEHG K+ +AA+ 
Sbjct: 3   DNFYITTPIYYVNAKPHLGHAYTTIIADVVCRYNTMLGKDAFLLTGTDEHGDKVVRAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  K + D+ SR FR++   L+I Y+ FIRTT+  H +  + + +KI D GDIY   Y
Sbjct: 63  ENLNPKEYADKISRLFRNLWPELNIKYNSFIRTTDPSHIEIVKQVLQKIYDSGDIYFSEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G             + ++E  YFF++S YQD L+ +   HP
Sbjct: 123 EGLYCFGCERFYTERELVNGK----CPDHETEPETIKESNYFFKMSRYQDWLIDHIRRHP 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P   +NEV+SF+K  L+DL +SR     +WGI +P D +Y+ YVW DAL NY+T  
Sbjct: 179 DFIRPERYKNEVLSFLKDPLEDLCISRPKTRLEWGISLPFDDKYVTYVWFDALLNYVTAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D       K+WP   H++ KDIL+ H IYWP  L +A +PL K +  HG+      K
Sbjct: 239 GYPDGEF--FKKYWPEAQHIVAKDILKPHGIYWPIILKAAGIPLFKHLNVHGYWNIDQSK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P+ +    G+DA RYFLVRE+  G D  ++++ L  R+N+DLAN IGNL 
Sbjct: 297 MSKSLGNVVEPLSLKNTYGLDAFRYFLVREMVFGLDSGFNEEALVSRINSDLANDIGNLF 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           SR ++M+ K + G+IP     TE +    +    S  L E ++ M++   H+AL  V   
Sbjct: 357 SRVITMVHKYFGGVIPEINPETEDEMQGGLKFDASAALSEYKKAMESFSFHKALMSVWEF 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++++++Y D   PWEL K   +R     V+Y  +E +R ++ L+   +P  A  +   L 
Sbjct: 417 INQMNKYVDTTAPWELAKKKSERKELEFVIYNLLEGLRIVSGLIYPVMPDTAKTMQQHLG 476

Query: 479 VADENRCFQSLDQR-----LKPGFMLHKTFDPIFPRF 510
              E+  F  L+Q      LK G  + K+   +FPR 
Sbjct: 477 QNPES-IFYDLNQLKSWKVLKAGTSIPKSVT-LFPRI 511


>gi|254390367|ref|ZP_05005584.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813846|ref|ZP_06772489.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442264|ref|ZP_08216998.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704071|gb|EDY49883.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326445|gb|EFG08088.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
          Length = 537

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 203/520 (39%), Positives = 299/520 (57%), Gaps = 17/520 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y N  PH+GHAY  +  DVL R+HR  G  V + TGTDEHGQKI + A+  G
Sbjct: 13  YYVTTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDEHGQKIMRTAETHG 72

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           VT + + D+  S  ++ + + LDI+ DDFIRTTEKRH D  +   + + DKG+IYKG Y 
Sbjct: 73  VTPQEWCDKLVSEAWKPLWEHLDIANDDFIRTTEKRHTDRVKEFVQDLYDKGEIYKGGYE 132

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y +  E Y    ++  G               PV+ ++EE YFF+LS Y  KLL  YE
Sbjct: 133 GPYCVGCEEYKLPGDLIDGEGEYAGQKLCPIHKKPVELLKEENYFFKLSEYGPKLLELYE 192

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S+P FI P   RNEV++FVK GL+DLS+SR TFDWG+K+P D ++++YVWIDAL NY T 
Sbjct: 193 SNPGFIQPESARNEVVNFVKQGLQDLSISRSTFDWGVKVPWDEKHVIYVWIDALLNYATA 252

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +NP+   A  +PA++H++GKDILRFHAI WPA L++  LP+P +V ++G+++  GE
Sbjct: 253 VGYNENPE-KFASTFPANVHLVGKDILRFHAIIWPAMLMANGLPVPGRVAANGWLMVGGE 311

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++    GVDA R++ +R I+ G+DG +  +    R  ++LAN  GNL
Sbjct: 312 KMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAISFGQDGSFSWEDFSVRYTSELANDYGNL 371

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
            SR  +M+ K + G +P   A  E++ ++    ++ + E    +         +  V   
Sbjct: 372 ASRVAAMVGKYFGGSLPEATAAGEAERAVQEGLAKAVAEADRKIGDEIDFQGGILAVFDF 431

Query: 421 VSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD- 475
           V +V+ Y   Q+PW++ K        R +T+LY   E +R +A+LL   +P+ +  ++D 
Sbjct: 432 VKQVNGYLTEQEPWKVAKDTSPEGQARLATILYTAAEALRGVAVLLNPVMPRTSQALWDS 491

Query: 476 -----ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 L    E R   +    L P          +FPR 
Sbjct: 492 LGAEAALGALAEQRVQDAGTWGLLPAGATVTKGAVLFPRL 531


>gi|73667420|ref|YP_303436.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|72394561|gb|AAZ68838.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 506

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 233/510 (45%), Positives = 332/510 (65%), Gaps = 10/510 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            +YI+T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQK+ KAAQ  
Sbjct: 3   NIYITTPIYYVNDVPHIGHVYTTLISDIIARFMRLDGYNVKFVTGTDEHGQKVEKAAQER 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++   F +  S  FR +ADV++ SY+DF+RTTE RH      LW  + D   +Y G YS
Sbjct: 63  NISLLEFTNGTSAVFRQLADVMNYSYNDFVRTTEMRHKKAVTALWTSLCDNDMVYLGSYS 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+RDEA+Y + E+  G            V+W+EE  YFFRLS +Q+KLL++YE HP+
Sbjct: 123 GWYSVRDEAFYQEKELIDGK-----APTGAEVEWIEEPSYFFRLSDFQEKLLTFYEEHPD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI+P  R NEVISFVKSGLKDLS+SRK   WGIK+P+D ++++YVW+DAL NYLT  G+ 
Sbjct: 178 FIIPKYRYNEVISFVKSGLKDLSVSRKNVVWGIKVPNDDEHVIYVWVDALANYLTVLGFP 237

Query: 246 DNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           D        +W  D    LHV+GKDILRFHA+YWPA L++A LPLPKK+ +HG+  ++G+
Sbjct: 238 DVKSKDYQTYWGNDNSTVLHVVGKDILRFHAVYWPAILMAAGLPLPKKILAHGWWTNEGQ 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           KISKSLGN+I P +++EE GVD LRYFL++E+  G DG + +    K +N+DLAN IGNL
Sbjct: 298 KISKSLGNIIKPFDLVEEFGVDQLRYFLIKEMPIGNDGDFKRSSFIKCINSDLANNIGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+VS++ K+ +G +P        +E +L     +L++ R  ++   ++  +  +  L 
Sbjct: 358 VQRTVSLLYKECEGKVPLVNNSLLRNEEVLPDYQEILEKARGCIKYYNLNGLIHIIEQLS 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           S  + Y  A+ PW+L K++ +    VLY  +E IR + +LLQ  +P+L++K+ D + +  
Sbjct: 418 SMANEYITARVPWKLSKSDREIMKAVLYKLLEYIRCIGLLLQPVIPELSSKMLDQINLPR 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            NR F      +  G +L K  +PIF + +
Sbjct: 478 CNRDFSKFSIPISMGEILPKP-EPIFAKIV 506


>gi|328953224|ref|YP_004370558.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453548|gb|AEB09377.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 638

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 210/516 (40%), Positives = 306/516 (59%), Gaps = 14/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +  LYI+T I Y NA+PHIGHAY  ++AD LARFHRL G +  F TGTDEHG+K+ +A
Sbjct: 3   KPQPPLYITTPIYYVNAEPHIGHAYTTVLADTLARFHRLMGAETRFQTGTDEHGEKVVEA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  K +VDQ S  FR   D + ISYD FIRTT+  H    + +  K++ +GDIY 
Sbjct: 63  ARARGIPVKDYVDQISGRFRGTWDQMQISYDHFIRTTDPLHIQVVQYVLNKVNSQGDIYF 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y+G Y    E +  + E+    DG+  + Q  P  +++E  YFFR+S YQD L+ Y +
Sbjct: 123 SEYAGHYCYGCERFVLERELV---DGKCPDHQVKPT-YVKEGNYFFRMSRYQDWLIEYIQ 178

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
           +H +FI P   RNEV+SF+K  L+DL +SR      WGI +P D  Y+ YVW DAL NYL
Sbjct: 179 THTDFIRPERYRNEVLSFLKEPLEDLCISRPRARVQWGIPLPFDDNYVTYVWFDALINYL 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY D     K  FWPA  H+I KDIL+ H IYWP  L +  L     +  HG+    
Sbjct: 239 TGLGYPDQALVKK--FWPACQHLIAKDILKPHGIYWPTILKATGLEPYHHLNVHGYWQIG 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SK+LGNV++P  ++++ G+D +RYF +RE+  G D  + +D L  R+NADLAN +G
Sbjct: 297 QGKMSKTLGNVVEPQRLVKQYGLDQVRYFFLREMVYGLDAVFSEDALVGRINADLANDLG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL SRS++M+ K   G++P  G +  +DE + S+   V  +    +     H+AL ++  
Sbjct: 357 NLFSRSLAMVFKYRQGVVPEAGPYESADEELRSLAEMVRDDYLGYLPELEFHKALQRLWE 416

Query: 420 LVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L+ E++RY    +PW+L K     R +TVLY  +E +R + ++L+  +P  A+++ + L 
Sbjct: 417 LIGEINRYIVVMEPWKLFKIQEQQRLNTVLYTILEGLRWVTVMLRPLLPASADRMREQLG 476

Query: 479 VADENRC---FQSL-DQRLKPGFMLHKTFDPIFPRF 510
           ++ +      F+ L   RL  G  L K   P+FPR 
Sbjct: 477 LSPDTWDSGLFELLTWGRLPTGVQLIK-GAPLFPRL 511


>gi|227486182|ref|ZP_03916498.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235813|gb|EEI85828.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 650

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 197/515 (38%), Positives = 303/515 (58%), Gaps = 13/515 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R+  YI+T I YPN+  HIG+ Y  IIADVL R+  L G +    TGTDEHGQKI +
Sbjct: 1   MTDRKPYYITTPIYYPNSNLHIGNTYTSIIADVLKRYKTLLGYEAYLVTGTDEHGQKIME 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G   + FVD+ +     + + LDI+YD FIR+T K+H      ++ K+ ++GDIY
Sbjct: 61  SAHAHGKEPQEFVDKIAAETIKLWEKLDINYDTFIRSTGKQHEKDVVDIFNKLYEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y    E ++ + ++  G            V + EEE YFFRLS Y DKL   +
Sbjct: 121 KGEYKGYYCTPCETFWTESQLEDGK----CPDCGRDVNYQEEETYFFRLSKYADKLKELF 176

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HPEF+ P  R+ E+++     GL+DLS++R +FDWG+ +P D ++++YVWIDAL+ YL
Sbjct: 177 KDHPEFLEPAFRQKEMLNNFINKGLEDLSVTRTSFDWGVDVPFDNKHVVYVWIDALSCYL 236

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           +  GY D+ +    ++WPA +H+IGKDI+RFH I WPA L++ +LPLP+KVF+HG+IL +
Sbjct: 237 SAIGYGDDKE-KFERYWPASVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFE 295

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GN++ P  ++E  G DAL+YF++RE   G DG +       R N+DL N +G
Sbjct: 296 NDKMSKSKGNIMYPEPLVELYGNDALKYFMLREFNFGSDGDFSSKKFMDRYNSDLVNDLG 355

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLVSR+ SMI K   G+I       + D+ ++++         + M +   + AL  +  
Sbjct: 356 NLVSRTTSMISKYNGGVIEKGTEEGKFDDELIALAKETYTRFTDLMDSFKFNEALETIWK 415

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+   ++Y D  +PW L +   +  R + VLY   E +R +A L++  +      I + L
Sbjct: 416 LIRRANKYVDETEPWILGRDEANLPRLNRVLYNLAETLRIVAQLIEPTMKDTTKLILEKL 475

Query: 478 FVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
               +N+ F+S  +   L+ G  + K    +F R 
Sbjct: 476 GT--DNKGFESAKEFGLLEEGAKVSK-GKNLFDRL 507


>gi|282900792|ref|ZP_06308732.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194322|gb|EFA69279.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 529

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 202/524 (38%), Positives = 307/524 (58%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  I AD +ARF RL G +V+F TGTDEHGQKI ++
Sbjct: 6   KTSKTFALTTPLYYVNDVPHIGSAYTTIAADTIARFQRLLGNEVIFITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ+ G + + F DQ   +F D+  +L+I YD F RTT+ +H    +  + ++ ++GDIY+
Sbjct: 66  AQSQGKSPQEFCDQIVPSFIDLWQILNIQYDRFSRTTDLKHQVIVKEFFHRVWEQGDIYR 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G   +        V+W +E+ YFFRLS YQ  L  +Y+
Sbjct: 126 GEQKGWYCVSCEEFKEERELIEG--KRCPIHTTKEVEWRDEQNYFFRLSKYQKPLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP FI P  RRNEV+SFV  GL+D S+SR   DWG  +P D Q+ +YVW DAL  Y+T 
Sbjct: 184 SHPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTQHTLYVWFDALLGYITA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
                     +   +K+WP +LH+IGKDILRFHA+YWPA L+SANLPLPK+VF HGF+  
Sbjct: 244 LLEPGTEPTLENAVSKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPKQVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ K+LGN +DP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKTLGNTVDPVALVKKYGSDAVRYYFLKEIEFGKDGDFNEIRFIHVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K   G IP+        + ++ ++  ++ +++++       +     V
Sbjct: 364 GNLLNRTLNMVKKYCAGEIPSIAPQDIPPENTLKTIGGQLGEKVKQAYSVLAFNEVAQAV 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   +++ D Q PW L K       +TVLY  +E +R  A LL   +P +++ I+  
Sbjct: 424 MLLVQASNKFIDEQAPWSLYKQGKQNEVATVLYTVLESVRLTAYLLSPIIPNISSDIYQQ 483

Query: 477 LFV------ADENRCFQSLDQRLKPGFMLHK----TFDPIFPRF 510
           L         +E             G + +K    T  PIF R 
Sbjct: 484 LGWGINFNHPEETSTVAPFTTHATWGVLSNKQQLGTPQPIFKRI 527


>gi|154175104|ref|YP_001407916.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803429|gb|EAU00773.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 636

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 212/511 (41%), Positives = 308/511 (60%), Gaps = 10/511 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK+YI+T I Y N  PHIGHAY  IIAD  ARF RL G    F TGTDEHGQKI +AA+
Sbjct: 2   KEKVYITTPIYYVNDVPHIGHAYTTIIADTFARFKRLQGHPTYFMTGTDEHGQKIEQAAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T K + D+ S  FR + D  +ISYD FIRTT++ H  T + ++ K+   GDIYKG 
Sbjct: 62  ARGKTPKEYADEISAKFRTLWDEFEISYDHFIRTTDEEHKLTAQNVFSKMQANGDIYKGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G+Y +  E ++   ++    D             ++EE YFFRLS YQD LL +Y++ 
Sbjct: 122 YEGFYCVSCETFFTATQL---LDDNCCPDCGRKTSIVKEESYFFRLSKYQDALLKWYKND 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLT 240
              ++P  ++NEV+SFVK GLKDLS++R +FDWG+K+P   +DP+++MYVW+DAL NYLT
Sbjct: 179 ELCVIPRGKKNEVVSFVKGGLKDLSITRTSFDWGVKLPASANDPKHVMYVWLDALVNYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           T GY  + D +   FW    H++GKDILRFHA+YWPAFL+S NL LPK V +HG+    G
Sbjct: 239 TLGY--SRDDALMDFWQNTTHIVGKDILRFHAVYWPAFLMSLNLALPKHVAAHGWWTRNG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNVIDP EV +  G++  RYF++RE+  G+DG + +  L +R+N++L NG+GN
Sbjct: 297 EKMSKSKGNVIDPREVAKAYGLENFRYFMLREVPFGQDGDFSQKALIERINSELGNGLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L++R + M  K  +  I         +   L      L+   EN++    +R L ++  +
Sbjct: 357 LLNRIIGMSGKYSEFKIDASNVAKFYNAE-LEEAHAHLKSAIENLEVLATNRYLEELWKV 415

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V+  +      +PW + K      A+ ++ ++  ++ ++A+LL   +PK A KI + L  
Sbjct: 416 VTLANGVIAKYEPWAMIKEGKTTEANALVALSANLLAKVAVLLSPAMPKTAGKIAEALSF 475

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               R F+ L         + K  +P+FPR 
Sbjct: 476 EINERSFKDLVLDNGVQNFISKPTEPLFPRI 506


>gi|152992719|ref|YP_001358440.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151424580|dbj|BAF72083.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 649

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 211/510 (41%), Positives = 317/510 (62%), Gaps = 13/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N   HIGHAY  IIAD LAR+ R+ GLD  F TGTDEHGQKI ++A+  
Sbjct: 7   KAYITTPIYYVNDIAHIGHAYTTIIADTLARYSRMSGLDTFFLTGTDEHGQKIEESAKAR 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T++ + D+ S  F+++ D   ISYD FIRTT+  H    +  +K + D GDIYK  Y 
Sbjct: 67  GKTSQEYADEISATFKNLWDDFGISYDKFIRTTDADHMKGVQKAFKVMYDNGDIYKDVYK 126

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++ + ++    DG++      P   +EEE YFF+LSAY+DKLL++Y  +P 
Sbjct: 127 GHYCISCETFFPESQL---VDGEFCPECGKPTTIVEEESYFFKLSAYEDKLLAWYNDNPN 183

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP  +RNEVI FV+ GL DLS++R +FDWG+K+P   +DP+++MYVW+DAL NY+T  
Sbjct: 184 CILPKSKRNEVIRFVEGGLDDLSITRTSFDWGVKLPAELNDPKHVMYVWLDALMNYVTAL 243

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D +K  FWPA +H+IGKDILRFHAIYWPAFL+S  L +PK + +HG+    GEK
Sbjct: 244 GY--GTDEAKMDFWPARVHLIGKDILRFHAIYWPAFLMSLGLEMPKHIAAHGWWTRDGEK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV++P EV +  G+D  RYF++RE+  G DG + +  L  R+N+DL N +GNL+
Sbjct: 302 MSKSKGNVVNPREVADAYGLDNFRYFMLREVPFGGDGDFSQKALIDRINSDLGNDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R + M  K ++G +      ++  ++ L      L+++   + +  IHR L ++   +S
Sbjct: 362 NRLIGMSGKYFEGKV-DSANVSKYYQTELDEVDISLEKLEPLLFDMQIHRYLEELWRPLS 420

Query: 423 EVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++  D  +PW L K   +  A  +  +   ++ +++++L   +P +  KI   L  + 
Sbjct: 421 VANKAIDKYQPWTLMKEGKEGEAMALNGLIANILAKVSVMLYPVMPVICPKIATALSFSI 480

Query: 482 ENRCFQSL--DQRLKPGFMLHKTFDPIFPR 509
           +N  + SL  +++L   F + K   P+FPR
Sbjct: 481 DNASWNSLIKEKQLLETFTIEK-IPPLFPR 509


>gi|323698358|ref|ZP_08110270.1| methionyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458290|gb|EGB14155.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 650

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 201/513 (39%), Positives = 303/513 (59%), Gaps = 14/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y NA+PH+GHAY   +AD L RFH+L G +  F TGTDEHG KI +AA++
Sbjct: 2   QRFYITTPIYYVNAKPHLGHAYTTTVADSLNRFHKLMGEETYFLTGTDEHGDKIVQAAES 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +VD  S+ FRD+   ++IS +DFIRTTE RH    + + +K+ D GDIY G Y
Sbjct: 62  NGQTPQEYVDVISKLFRDLWPNMNISNNDFIRTTEPRHKAVVQQILQKVYDAGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG   +    P +++ E+ YFF++S Y+D LL +   HP
Sbjct: 122 GGHYCFGCERFYTEKELV---DGLCPDHLTKP-EYIAEKNYFFKMSKYRDWLLDHINKHP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY+  
Sbjct: 178 DFIRPERYRNEVVSLLESGELEDLCISRPKSRLTWGIELPFDADYVTYVWFDALINYVAA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D       KFWPA  H++ KDIL+ HAI+WP  L +A +   + +  HG+ L +  
Sbjct: 238 LGWPDGE--KFKKFWPAANHMVAKDILKPHAIFWPTMLKAAGIEPYQHLNVHGYWLVEDT 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV++P+ + +  G+DA RYFL+RE++ G+D  + +  L  R+NADLAN +GNL
Sbjct: 296 KMSKSIGNVVEPLAMKDAYGLDAFRYFLLREMSFGQDSSFSEKALVGRLNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R++SM  K + G IP P      D  I  +    +Q  ++   +    RAL  +  LV
Sbjct: 356 FNRTLSMTHKYFGGKIPRPDVEDVVDAEIKKIGQDAMQSFQDFFTDLKFSRALEGLWELV 415

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV- 479
             +++Y D   PW L K  N  R STV+YV +E +R++A+ L   +P+ + ++ + L + 
Sbjct: 416 RGLNKYIDETAPWALFKEKNTGRLSTVIYVLLENMRKIAVHLWPVMPEASERMLEQLGIT 475

Query: 480 --ADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
              ++    + LD   L     +      +FPR
Sbjct: 476 FDPEKINLPKELDVWGLLESDAMVAETSNLFPR 508


>gi|57239498|ref|YP_180634.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161577|emb|CAH58505.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 506

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 232/511 (45%), Positives = 327/511 (63%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             +Y++T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQKI KAA  
Sbjct: 2   RNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  +   F D  S  F+ +A V++ S+DDFIRTTE RH      LW+++ + G IY G Y
Sbjct: 62  ANKSLVEFTDHASAIFQHLAGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY++RDE +Y + E+  G            V+W+EE  YFFRLS +Q++LL +Y+ HP
Sbjct: 122 AGWYAVRDETFYQEKELIDGK-----APTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHP 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI+P  R NEVISFVKSGLKD+S+SR+   WGI +P+D  +I+YVWIDALTNYLTT G+
Sbjct: 177 NFIIPKHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGF 236

Query: 245 LDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +        +W       +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+  ++G
Sbjct: 237 PEINSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGNVI+P E+IEE GVD +RYFL++E+  G DG Y +  +   +N DLAN IGN
Sbjct: 297 QKISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRSSIINCINCDLANNIGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+VS++ K+  G IP   +    DE  L     +L+ +R  +    ++  +  V  L
Sbjct: 357 LVQRTVSLLHKECRGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGMIHIVEEL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            S  + Y   + PW+L KT+P     VLY  +E IR + +LLQ  +P L++KI D + ++
Sbjct: 417 SSIANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALS 476

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +    +  G +L K  +PIF + +
Sbjct: 477 EYKRSFNNFAVPIDTGIILPKP-EPIFTKII 506


>gi|186680640|ref|YP_001863836.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463092|gb|ACC78893.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 534

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 209/525 (39%), Positives = 305/525 (58%), Gaps = 18/525 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  I ADV+ARFHRL G  VL  TGTDEHGQKI ++
Sbjct: 6   KTEKTFALTTPLYYVNDVPHIGSAYTTIAADVVARFHRLLGHQVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F D+   +F  +  +LDI YD F RTT  RH    +  ++++ + GDIY+
Sbjct: 66  AESLGKAPQEFCDEVVPSFISLWQLLDIKYDRFSRTTAPRHEAIVKEFFERVWESGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + ++ +G   +     +  V+W +E+ YFFRLS YQ+KL  +Y+
Sbjct: 126 GQQQGWYCVSCEEFKEERDLLEGH--RCPIHTNKEVEWRDEQNYFFRLSKYQNKLTEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P FI P  RRNEV+SFV  GL+D S+SR   DWG  +P DP++ +YVW DAL  Y+T 
Sbjct: 184 SKPNFIQPESRRNEVLSFVNQGLQDFSISRVNLDWGFPVPVDPKHTLYVWFDALLGYVTA 243

Query: 242 TGYLDNPD---GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D       +   +WP +LH+IGKDILRFHA+YWPA LLSA LPLP++VF HGF+  
Sbjct: 244 LLEPDAEPTLANALETWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPERVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DP+ +++  G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTLDPVSLVQRYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRALAQ 416
           GNL++R++SM+ K   D  +P+ G    SDE+ L     R+ ++++E  +     +A   
Sbjct: 364 GNLLNRTLSMVKKYCVDNNVPSIGNEGISDENPLKTIGLRLGEQVKEAYKELAFSQACGA 423

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++SL    +++ D Q PW L K         VLY  +E +R  A LL   +P +++ I+ 
Sbjct: 424 ILSLAQASNKFIDEQAPWSLYKQGQQESVEKVLYAVLESVRLAAYLLSPIIPNISSDIYQ 483

Query: 476 ILFVA-DENRCFQS---------LDQRLKPGFMLHKTFDPIFPRF 510
            L    D N   QS             +        TF P+F R 
Sbjct: 484 QLGFGIDFNDQIQSSVTAPFATHATWGILSSKQQLGTFQPVFKRI 528


>gi|15606482|ref|NP_213862.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|7388279|sp|O67298|SYM_AQUAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78101749|pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101750|pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101753|pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|78101754|pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|2983692|gb|AAC07256.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 497

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 206/512 (40%), Positives = 297/512 (58%), Gaps = 21/512 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +K Y++T I Y N  PH+GHAY  I AD +AR++RL   DV F TGTDEHG KI K
Sbjct: 1   MTLMKKFYVTTPIYYVNDVPHLGHAYTTIAADTIARYYRLRDYDVFFLTGTDEHGLKIQK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ K  VD+N+  F+ + + L I Y  FIRTT+  H    + ++++   +GDIY
Sbjct: 61  KAEELGISPKELVDRNAERFKKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y GWY +  E + ++ E+   A+           ++++E  YFFRLS YQDKLL  Y
Sbjct: 121 LGEYEGWYCVGCEEFKSEAEL---AEDHTCPIHQKKCEYIKEPSYFFRLSKYQDKLLELY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY 238
           E +PEFI P  RRNE+ISFVK GLKDLS++R      WGI +P DP++ +YVW DAL NY
Sbjct: 178 EKNPEFIQPDYRRNEIISFVKQGLKDLSVTRPRSRVKWGIPVPFDPEHTIYVWFDALFNY 237

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           ++              +WPADLH++GKDILRFH +YWPAFL+S    LPKKVF+HG+   
Sbjct: 238 ISALEDKV------EIYWPADLHLVGKDILRFHTVYWPAFLMSLGYELPKKVFAHGWWTV 291

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G+K+SK+LGNV+DP EV++E G+D +RYFL+RE+  G+DG + K  +  R+N +LAN I
Sbjct: 292 EGKKMSKTLGNVVDPYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNRINGELANEI 351

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL SR V+M  K   G           DE    +    ++     M+    ++A+ +++
Sbjct: 352 GNLYSRVVNMAHKFLGG-----EVSGARDEEYAKIAQESIKNYENYMEKVNFYKAIEEIL 406

Query: 419 SLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              S +++Y D ++PW L K    +    VLY  V+ +  L  LL    P    +   +L
Sbjct: 407 KFTSYLNKYVDEKQPWALNKERKKEELQKVLYALVDGLFVLTHLLYPITPNKMKEALQML 466

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               E    + L    K  + L +    +FP+
Sbjct: 467 G---EKEFLKELKPYSKNTYKLGER-KILFPK 494


>gi|303248590|ref|ZP_07334846.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490031|gb|EFL49953.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 651

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 198/512 (38%), Positives = 292/512 (57%), Gaps = 14/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+T I Y NA+PH+GHAY  I+ D LARFH L G +V F TGTDEHG KIA+AAQ A
Sbjct: 3   RFFITTPIYYVNAKPHLGHAYTTIVVDALARFHALLGEEVFFLTGTDEHGDKIAEAAQKA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K + D  S  F  +   L I+   FIRTT+  H +  +   + + DKGDIY G Y 
Sbjct: 63  GQTPKEYADSISGLFSSLWPKLGIAPRRFIRTTDPDHKEAVKKALQLVYDKGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG   + +  P +++ E+ YFFR+S YQ  LL + +++P+
Sbjct: 123 GHYCKGCERFLTEKELV---DGLCPDHKVKP-EYIAEKNYFFRMSKYQGALLEHIKANPD 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P + RNEV+S ++SG L+DL +SR      WGI++P D  ++ YVW DAL NYLT  
Sbjct: 179 FIRPRQYRNEVVSLLESGALEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALMNYLTAI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D+P    +K+W    HV+ KDIL+ HA++WP  LL+  LPL K++  HG+ L +  K
Sbjct: 239 GWPDDP--DFSKWWDVAEHVVAKDILKPHAVFWPTMLLAMGLPLYKRLNVHGYWLVRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNVI+P+ + E+ G+  +RYFL+RE+  G D  +  + L  R NADLAN +GNL 
Sbjct: 297 MSKSLGNVIEPLAMAEQAGLSGMRYFLLREMVFGSDASFSDEALIGRFNADLANDLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K + G +P   A   +D  +  +    +    +        RAL  +  LV 
Sbjct: 357 NRALAMTTKYFGGTVPASDAPQAADAELARLGREAMANFVQLFGAAQFSRALEALWELVR 416

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++Y DA  PW L K  +  R  TV+   +  +RQ+A+ L   +P+ A K+   L    
Sbjct: 417 GLNKYIDAMAPWTLFKEGDTARLGTVMATVLGGLRQVAVCLLPVMPEAAEKLLAQLGQET 476

Query: 482 ENRCFQSLDQRLKP---GFMLHKTFDPIFPRF 510
                    +   P   G  +  T + +FPR 
Sbjct: 477 AGLNLAKEAENFAPLAAGTAVAATSN-LFPRM 507


>gi|313679972|ref|YP_004057711.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152687|gb|ADR36538.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 626

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 192/508 (37%), Positives = 290/508 (57%), Gaps = 11/508 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y NA+PHIGHAY  I AD LAR+HRLDG D  F TGTDEHG+KIA+AA+
Sbjct: 2   KKTFYVTTPIYYVNARPHIGHAYTTINADFLARWHRLDGYDTFFLTGTDEHGEKIAQAAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   + FVD+ +  F+   +VL ISYDDFIRTTE RH    +   ++I D+GDIY G 
Sbjct: 62  RAGKPPQQFVDEVAEEFKKAWEVLHISYDDFIRTTEPRHKKVVQRYLQEIYDRGDIYYGE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E +  + E+    DG+  +    P +   E  YFF++  Y+  L  + + H
Sbjct: 122 YEGLYCVGCERFLTEKEL---VDGKCPDHGVEP-EPRREGNYFFKMEKYRTWLRGHIQKH 177

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           P F+ P   RNEV++ +   + DLS+SR      WGI++P DP ++ YVW DAL NY++ 
Sbjct: 178 PGFVRPERYRNEVLAILSEPIGDLSISRPKSRVSWGIELPWDPDHVTYVWFDALLNYISA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D       K+WPA  H+IGKDIL+ HA++WP  L + ++ + + +   G +L  G 
Sbjct: 238 LGYPDGER--FQKYWPAAQHMIGKDILKTHAVFWPTMLKAGDVAVYRHLNVGGHLLADGR 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVIDP E   + G DA+RY+L++E   G DG   + GL +R NADLAN +GNL
Sbjct: 296 KMSKSLGNVIDPFEWARKYGPDAVRYYLLKETPYGLDGAVSEAGLVERYNADLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  +M+LK Y            ++  ++     ++ ++R  +     ++AL +V+  V
Sbjct: 356 LQRVRTMVLK-YRQGRLRFQQPGAAEHEVVEAAEALVPKVRGLVGELRFNQALEEVLQFV 414

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++RY + + PW++   + +    VLY  VE +R  ++LL+  +P    ++   L +  
Sbjct: 415 RSLNRYINERAPWKIA--DAEELDRVLYTAVEGMRVASVLLEPAMPVKMAELRAALGLGP 472

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                      L  G +L      +FP+
Sbjct: 473 LRVADVERWGGLPDGHLLPVEAPILFPK 500


>gi|325833648|ref|ZP_08166097.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325485572|gb|EGC88041.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 529

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 207/519 (39%), Positives = 296/519 (57%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +     +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A
Sbjct: 2   SKGTYSFTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G+T + + D     FRD  D+L I+Y DF+RTTE RH  T +  W+ + DKG  YKG
Sbjct: 62  ADKGMTPQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYY 180
            Y GWY + +E YY + ++ K  +G+        PVQ    EE +FF+LS + DKLL++Y
Sbjct: 122 SYEGWYCVHEETYYAESDLEKNDEGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT
Sbjct: 182 EENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLT 241

Query: 241 TTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY D  +        WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L 
Sbjct: 242 GIGYGDEGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLT 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KGEK+SKS GN + P ++ +  GVDA RY+ + ++  G DG    + + +  NADLAN  
Sbjct: 302 KGEKMSKSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTW 361

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL SR  +M  K +DG +P  P     ++  + ++   +  E    +       A A V
Sbjct: 362 GNLCSRVFNMTKKYFDGQVPEVPAEVLANENPLRAITEELYAEYDAALGAVDFTAAAAAV 421

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L   V+ Y +   PW L K+       + V+Y  +E IR +A+ +  F+P  + ++F 
Sbjct: 422 QKLAGRVNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFR 481

Query: 476 ILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L + D     +    +   +L  G  + +  DP+FPR 
Sbjct: 482 RLSLGDIEAVTDIEAATAWGQLPAGNPV-EIGDPLFPRL 519


>gi|313893365|ref|ZP_07826939.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442134|gb|EFR60552.1| methionine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 484

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 196/466 (42%), Positives = 291/466 (62%), Gaps = 7/466 (1%)

Query: 20  PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN 79
            HIGH Y   +AD +ARF RL G DV F TG+DEHGQKI +AA   G+T   +       
Sbjct: 1   MHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQRAAAAEGITPLEYTTNIVNG 60

Query: 80  FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           F+ + + + IS DDFIRTT++RH    + L+ K  +KGDIYK  Y GWY   DE ++ + 
Sbjct: 61  FKALWEKMHISNDDFIRTTDERHEKVVQELFTKAYEKGDIYKAEYEGWYCTPDETFWTEQ 120

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           ++              PV+ ++EE YFF+L  Y D+ L + E +P+FI P  RRNE+I F
Sbjct: 121 KLGPNH---TCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEENPDFIQPESRRNEMIQF 177

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           VK GL+DL++SR +FDWGIK+P DP++++YVW DAL NY++     D       K+WPAD
Sbjct: 178 VKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISALSPFDGDGELYKKYWPAD 237

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           LH++GK+I+RFH I WP  L+S  LPLPKKVF HG+++  G K+SKSLGNVIDPI +I+ 
Sbjct: 238 LHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTKMSKSLGNVIDPIPLIDT 297

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D+LRY+L+ EI  G DG +       ++NADL+N +GNL++R+++MI K +DG+I  
Sbjct: 298 YGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLLNRTIAMIEKYHDGVITK 357

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + D  + ++  + +++    M+N  +++A+  V + +  +++Y D   PW L K+
Sbjct: 358 CDDMDDLDRDVSALAVQTVKDFEAAMENMELNKAIKSVWAFIGRMNKYIDETMPWVLAKS 417

Query: 440 ----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  R  + +Y   E +R +AIL+   +P  A KI+D L +A 
Sbjct: 418 EDANDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWDQLGLAG 463


>gi|212702582|ref|ZP_03310710.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
 gi|212674023|gb|EEB34506.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
          Length = 654

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 200/517 (38%), Positives = 304/517 (58%), Gaps = 19/517 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA+PH+GHAY  I+AD L+RFH+  G + +F TGTDEHG KI KAA+ 
Sbjct: 2   KNFYITTPIYYVNAKPHLGHAYTTIVADSLSRFHKTLGDNTMFLTGTDEHGDKIVKAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K FVD  S  F+ +   L I  D F+RTT++ H    +   +++ D GDIY G +
Sbjct: 62  QGVSPKEFVDGISGLFQQLWPHLGIENDAFVRTTDEDHKARVQRFLQQVYDAGDIYFGEF 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+  G             +++ E+ YFFR+S Y   L  Y ESHP
Sbjct: 122 GGHYCYGCERFYTEKELENG----LCPQHLTKPEFISEKNYFFRMSKYLPWLREYIESHP 177

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P   RNEV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++ 
Sbjct: 178 DFIRPERYRNEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALLNYISA 237

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+ D     K K +    H++ KDIL+ HA++WP  L +A LP+ + +  HG+ L +  
Sbjct: 238 LGWPDG---EKYKTFWPGEHLVAKDILKPHAVFWPTMLKAAGLPMYQHLNVHGYWLVRDT 294

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P+E+ ++ G+DA RYFL+RE+  G D  + ++G+  R+NADLAN +GNL
Sbjct: 295 KMSKSLGNVVEPLEMRQKYGLDAFRYFLLREMHFGSDASFSEEGMVTRINADLANDLGNL 354

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR +SM  K ++  +P PG F+E D++I+ +C+  +    +   N    + L  +  LV
Sbjct: 355 FSRVLSMTAKYFESKVPQPGEFSEDDKAIVELCATAMTNYIQLFGNTQFAQGLDSLWDLV 414

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-V 479
             +++Y D+Q PW L K  +  R  TV+YV +  +R++A+ L A +P  +  + + L   
Sbjct: 415 RALNKYVDSQAPWTLFKQGDTMRLGTVMYVLLSAMRKVALCLWAVMPDASRTLLEQLGQQ 474

Query: 480 ADENRCFQSLD------QRLKPGFMLHKTFDPIFPRF 510
             E     SL+        L+PG  +  + + +FPR 
Sbjct: 475 PGEGPVTTSLEAEAGNFDGLQPGTEVAASSN-LFPRI 510


>gi|159029236|emb|CAO87596.1| metG [Microcystis aeruginosa PCC 7806]
          Length = 537

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 202/530 (38%), Positives = 292/530 (55%), Gaps = 23/530 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ER+   ++T + Y N  PHIG AY  I+ADV+AR+ RL G  VL  TGTDEHGQKI +
Sbjct: 4   LNERKTFALTTPLYYVNDIPHIGSAYTTIVADVMARWKRLQGNSVLLITGTDEHGQKIER 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+  +   D+ + +F ++   L I YD F RTT  RH       ++K+ +KGDIY
Sbjct: 64  TAAAKGLNPQEHCDRIATSFANLWAKLHIQYDRFSRTTAPRHQAIVNEFFEKVWEKGDIY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY +  E +    E+    +G      +   +W +EE YFFRLS YQ +L   Y
Sbjct: 124 LDRQQGWYCVACEEFKEKRELL--DNGCCPIHTNLAAEWRDEENYFFRLSKYQAQLEQLY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +  P FI P  RRNEV++FV  GL+D S+SR    WG  IP D Q+ +YVW DAL  Y+T
Sbjct: 182 QEQPNFIQPESRRNEVLNFVNQGLQDFSISRVNVAWGFPIPHDGQHTIYVWFDALLGYVT 241

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                ++    +   AK+WP DLH+IGKDILRFHAIYWPA L+SA LPLPK+VF HGF+ 
Sbjct: 242 ALLDPEDEPTLENALAKWWPIDLHLIGKDILRFHAIYWPAMLMSAGLPLPKRVFGHGFLT 301

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN +DP ++++  G DA+RY+ V+EI  G+DG + +      +NADLAN 
Sbjct: 302 KDGRKMGKSLGNTLDPFDLVDRYGADAVRYYFVKEIELGQDGDFQETRFVNILNADLAND 361

Query: 358 IGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R++ M+ K    + P   G    +D  + ++ + +   + +       ++A  +
Sbjct: 362 LGNLLNRTLGMVKKYCQNIPPQLTGVDIPNDNRLKNMGTNLGVIVEQKYDALQFNQACEE 421

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +++L+   +++ D   PW L K     A   VLY  +E +R  A LL   +P L++KI+ 
Sbjct: 422 ILALIRASNKFIDESAPWSLFKQKQQAAVEQVLYAVLESVRLSAYLLSPIIPTLSSKIYQ 481

Query: 476 ILF---------------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L                  D    FQ     L     L  T +PIF + 
Sbjct: 482 QLGFVIDFNTFRSEDGENFPDSVSFFQHCQWGLPTNPQLG-TPEPIFSKL 530


>gi|58579479|ref|YP_197691.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418105|emb|CAI27309.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 506

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 231/511 (45%), Positives = 326/511 (63%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             +Y++T I Y N  PHIGH Y  +I+D++ARF RLDG +V F TGTDEHGQKI KAA  
Sbjct: 2   RNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A  +   F D  S  F+ +  V++ S+DDFIRTTE RH      LW+++ + G IY G Y
Sbjct: 62  ANKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY++RDE +Y + E+  G            V+W+EE  YFFRLS +Q++LL +Y+ HP
Sbjct: 122 AGWYAVRDETFYQEKELIDGK-----APTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHP 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            FI+P  R NEVISFVKSGLKD+S+SR+   WGI +P+D  +I+YVWIDALTNYLTT G+
Sbjct: 177 NFIIPKHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGF 236

Query: 245 LDNPDGSKAKFW----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            +        +W       +HV+GKDILRFHA+YWPA L++A LPLPK++ +HG+  ++G
Sbjct: 237 PEINSSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEG 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGNVI+P E+IEE GVD +RYFL++E+  G DG Y +  +   +N DLAN IGN
Sbjct: 297 QKISKSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRSSIINCINCDLANNIGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+VS++ K+  G IP   +    DE  L     +L+ +R  +    ++  +  V  L
Sbjct: 357 LVQRTVSLLHKECRGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGMIHIVEEL 416

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            S  + Y   + PW+L KT+P     VLY  +E IR + +LLQ  +P L++KI D + ++
Sbjct: 417 SSIANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALS 476

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +  R F +    +  G +L K  +PIF + +
Sbjct: 477 EYKRSFNNFAVPIDTGIILPKP-EPIFTKII 506


>gi|282896532|ref|ZP_06304552.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281198638|gb|EFA73519.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 533

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 200/524 (38%), Positives = 308/524 (58%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  I AD +ARF RL G +V+F TGTDEHGQKI ++
Sbjct: 6   KTSKTFALTTPLYYVNDVPHIGSAYTTIAADTMARFQRLLGNEVIFITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ+ G + + F DQ   +F D+  +L+I YD F RTT+ +H    +  + ++ ++GDIY+
Sbjct: 66  AQSQGKSPQEFCDQIVPSFIDLWQILNIQYDRFSRTTDLKHQAIVKEFFNRVWEQGDIYR 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G   +        V+W +E+ YFFRLS YQ  L  +Y+
Sbjct: 126 GEQKGWYCVSCEEFKEERELIEG--KRCPIHTTKEVEWRDEQNYFFRLSKYQKPLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP FI P  RRNEV+SFV  GL+D S+SR   DWG  +P D ++ +YVW DAL  Y+T 
Sbjct: 184 SHPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTEHTLYVWFDALLGYITA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
                     +   +K+WP +LH+IGKDILRFHA+YWPA L+SANLPLP++VF HGF+  
Sbjct: 244 LLEPGTEATLENAVSKWWPINLHLIGKDILRFHAVYWPAMLISANLPLPQQVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ K+LGN +DP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKTLGNTVDPVALVKKYGSDAVRYYFLKEIEFGKDGDFNEIRFIHVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K   G IP+        + ++ ++  ++ +++++       +     V
Sbjct: 364 GNLLNRTLNMVKKYCAGEIPSIAPQDIPPENTLKTIGGQLGEKVKQAYSVLAFNEVAQAV 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   +++ D Q PW L K     + +TVLY  +E +R  A LL   +P +++ I+  
Sbjct: 424 MLLVQTSNKFIDEQAPWSLYKQGKQNQVATVLYTVLESVRLAAYLLSPIIPNISSDIYQQ 483

Query: 477 LFV------ADENRCFQSLDQRLKPGFMLHK----TFDPIFPRF 510
           L          E             G + +K    T +PIF R 
Sbjct: 484 LGWGINFNNPKETSTVAPFTTHATWGVLSNKQQLGTPEPIFKRI 527


>gi|224373264|ref|YP_002607636.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589648|gb|ACM93384.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 635

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 205/517 (39%), Positives = 314/517 (60%), Gaps = 13/517 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ++ +  Y++T I Y N  PHIGHAY  IIAD++AR+ RL G+D  F TGTDEHGQKI 
Sbjct: 1   MSDKCKTYYLTTPIYYVNDIPHIGHAYTTIIADMVARYSRLKGIDTFFLTGTDEHGQKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA+  G + K + D+ S  F+ + D  +ISYD FIRTT++ H    +  +  +  KGDI
Sbjct: 61  EAAKKRGKSPKEYADEISGKFKALWDEFEISYDKFIRTTDEAHKKGVQKAFLDMYKKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK  Y G Y +  E++    ++    + +       P + ++EE YFFRLS YQD+LL +
Sbjct: 121 YKDYYEGHYCVSCESFVAPSQL---VNDELCPDCGKPTRIIKEESYFFRLSKYQDQLLDW 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALT 236
            ++    ILP  + NEVI FV+ GLKDLS++R +F+WG+K+P   +DP++++YVW+DAL 
Sbjct: 178 LKNKKP-ILPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPPEINDPKHVVYVWLDALF 236

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT  GY    D    K+WPA LH++GKDIL+FHA+YWPAFL+S    LPK + +HG+ 
Sbjct: 237 NYLTALGYGSENDELVKKYWPAKLHIVGKDILKFHAVYWPAFLMSIGYELPKVIAAHGWW 296

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKS GNVI+P +V +  G++  RYF++RE+  G DG + +  L  R+N DL N
Sbjct: 297 TRDGEKMSKSKGNVINPKDVADAYGLENFRYFMLREVPFGADGDFSEKALIDRINNDLGN 356

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE-NMQNQLIHRALA 415
            +GNL++R + M  K +DG I T     +   + L+    +++ + E  +    IH+ L 
Sbjct: 357 DLGNLLNRIIGMAYKYFDGKI-TSKNVEKYYANELNEAREIVKNLEETYLWKMQIHKFLE 415

Query: 416 QVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++  +++  ++  D  KPWEL K    ++A  +L +   ++  +A+ L A +PK   KI 
Sbjct: 416 ELWKVLAIGNKAIDTYKPWELMKNGEEEKAQALLGLISNLLAMVAVNLHAVMPKTTAKIA 475

Query: 475 DILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
             L        F+++ D +L   F++ K   P+FP+ 
Sbjct: 476 KSLGFEINQESFKNIMDGKLLDDFVIEK-IPPLFPKI 511


>gi|220904688|ref|YP_002480000.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868987|gb|ACL49322.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 670

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 197/518 (38%), Positives = 295/518 (56%), Gaps = 22/518 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             +I+T I Y NA+PH+GHAY  ++AD +AR+H+L G D LF TGTDEHG KI +AA+  
Sbjct: 3   TFFITTPIYYVNARPHLGHAYTTVVADAMARYHKLAGQDTLFLTGTDEHGDKIVQAAEKE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G + K FVD  S  F+ +   LD++ D F+RTT+  H  + +   +K+ D GDIY G + 
Sbjct: 63  GKSPKEFVDGISARFQALWPRLDVANDRFVRTTDPAHVASVQSFLQKVYDAGDIYFGEFG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +Y + E+  G          +  +++ E+ YFFR+S Y   L  + E +P 
Sbjct: 123 GHYCYGCERFYTEKELENG----LCPQHLSKPEFISEKNYFFRMSKYLPWLKEHIEQNPT 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P   R EV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL NY++  
Sbjct: 179 FIRPERYRTEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D       ++WP + H++ KDIL+ HA++WP  L SA LP  + +  HG+ L +  K
Sbjct: 239 GWPDGA--DFERYWPGE-HLVAKDILKPHAVFWPTMLKSAGLPQYRHLNVHGYWLVRDTK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P E+ +  G DA RYFL+RE+  G D  +  + L  R+NADLAN +GNL 
Sbjct: 296 MSKSLGNVVEPEEMAQRFGADAFRYFLLREMHFGSDASFSDEALVGRINADLANDLGNLF 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR +SM  K +   +P P  F E+D++I  +C+  ++   +   N    + L  +  LV 
Sbjct: 356 SRVLSMTAKYFGSRVPAPKQFDEADKAIEDLCATAMRNFSQLFGNVQFAQGLESLWELVR 415

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--- 478
            +++Y D+Q PW L K  N +R +TV+YV +  +R+ A+ L   +P    K+ + L    
Sbjct: 416 ALNKYVDSQAPWALHKQGNMERLATVMYVLLAAMRKTALCLWPVMPVACGKMLEQLGQPV 475

Query: 479 ------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 V        SLD  L PG  + +    +FPR 
Sbjct: 476 QKTLPPVPVLEEEMGSLDG-LVPGTGVAEA-SNLFPRI 511


>gi|284052455|ref|ZP_06382665.1| methionyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291571486|dbj|BAI93758.1| methionyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 534

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 196/524 (37%), Positives = 290/524 (55%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   ++T + Y N  PHIG AY  I AD +AR+ RL G +VL  TGTDEHGQKI + 
Sbjct: 6   TTKKTFSLTTPLYYVNDVPHIGSAYTTIAADAIARWKRLQGYEVLLITGTDEHGQKIQRT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG + +V  D+   +F  +  +L+I YD F RTT  RH    R  ++++ +  DIY 
Sbjct: 66  AEEAGCSPQVHCDRIVSSFESLWKLLEIQYDRFSRTTSPRHEAIVREFFQRVWENEDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               GWY +  E +    E+    +       +  V+W +E+ YFFRLS YQ +L + Y 
Sbjct: 126 SQQQGWYCVSCEEFKEKRELI--DEKYCPIHVNKEVEWRDEQNYFFRLSKYQKQLEALYH 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            HP+FI P  RRNEVISFV  GL+D S+SR   DWG  +P DP   +YVW DAL  Y+T 
Sbjct: 184 DHPDFIGPESRRNEVISFVNQGLQDFSISRVNLDWGFPVPIDPSQTLYVWFDALLGYVTA 243

Query: 242 TGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D+         K+WP DLH+IGKDILRFHA+YWPA L+SA+LPLP ++F HGF+  
Sbjct: 244 LVDPDSEPSLSEAIAKWWPIDLHLIGKDILRFHAVYWPAMLMSADLPLPGRIFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN ++P+E++ + G DA+RY+ ++EI  G+DG Y++      +NADLAN +
Sbjct: 304 DGKKMGKSLGNTLNPVELVNQYGTDAVRYYFLKEIEFGQDGDYNQTRFINTLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++ M  K +DG +P        +D  + S+ S +   + +  +     +    V
Sbjct: 364 GNLLNRTMKMAAKYFDGRVPAIAVDNISADNHLKSIGSSLGNTVSQFYEKLAFSQVCEAV 423

Query: 418 ISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   ++Y D Q PW L K       S V+Y  +E +R  A LL   VP L+  ++  
Sbjct: 424 LVLVQAGNKYVDEQAPWSLYKRGELSALSEVIYSVLESVRLAAYLLAPIVPNLSTAVYQQ 483

Query: 477 LFVADENRCFQ----------SLDQRLKPGFMLHKTFDPIFPRF 510
           L  +   +  +               + P   +     P+F + 
Sbjct: 484 LGYSMNFQDPEGAAKIMGLDSHAHWGILPSEQVLGEGKPVFQKL 527


>gi|257792394|ref|YP_003183000.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476291|gb|ACV56611.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 529

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 208/519 (40%), Positives = 297/519 (57%), Gaps = 12/519 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +     +T I Y NA PH+G AY  I AD +AR+ R++G DV F TG DEHGQK+A  A
Sbjct: 2   SKGTYSFTTPIYYVNAAPHLGTAYTTIAADTVARYQRMNGYDVAFVTGMDEHGQKVADTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            + G+T + + D     FRD  D+L I+Y DF+RTTE RH  T +  W+ + DKG  YKG
Sbjct: 62  ADKGMTPQDWCDSMEPAFRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYY 180
            Y GWY + +E YY + ++ K  +G+        PVQ    EE +FF+LS + DKLL++Y
Sbjct: 122 SYEGWYCVHEETYYAESDLEKNDEGELVCPDCKRPVQKAGGEENWFFKLSEFGDKLLAFY 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E +P+FI P  R+NE++SFVKSGLKDLS+SR TFDWG+ +P D  ++ YVW DAL  YLT
Sbjct: 182 EENPDFIRPETRKNEIVSFVKSGLKDLSISRSTFDWGVPLPFDEGHVAYVWADALLAYLT 241

Query: 241 TTGYLDNPDG--SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
             GY D  +        WP   H +GKDI RFH + WPA L++A LP+   VF HGF+L 
Sbjct: 242 GIGYGDEGERAGEFDARWPMQYHFVGKDITRFHCVIWPAMLMAAGLPITHTVFGHGFLLT 301

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KGEK+SKS GN + P ++ +  GVDA RY+ + ++  G DG    + + +  NADLAN  
Sbjct: 302 KGEKMSKSKGNALKPADLCKVFGVDAYRYYFMSDVQFGADGSISMERMVQVYNADLANTW 361

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL SR  +M  K +DG +P   A   + E+ + ++   +  E    +       A A V
Sbjct: 362 GNLCSRVFNMTKKYFDGQVPEVSAGVLAKENPLRAISDELYAEYDAALGAVDFTAAAAAV 421

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L   V+ Y +   PW L K+       + V+Y  +E IR +A+ +  F+P  + ++F 
Sbjct: 422 QKLAGRVNLYVEESAPWNLAKSEETAGELAEVIYNALEAIRIIALYMAPFMPNTSAEVFR 481

Query: 476 ILFVAD----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L + D     +    +   +L  G  + +  DP+FPR 
Sbjct: 482 RLSLGDIEAVTDIEAATAWGQLPAGNPV-EIGDPLFPRL 519


>gi|168023212|ref|XP_001764132.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684572|gb|EDQ70973.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 640

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 193/516 (37%), Positives = 285/516 (55%), Gaps = 14/516 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  ++T + Y NA PH+G AY  I AD LARF RL G DV F TGTDEHG+KIA AA  
Sbjct: 86  ERFTVTTPLYYVNAAPHMGSAYPTIAADALARFQRLQGRDVNFITGTDEHGEKIALAAAA 145

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   K   D  +  ++ +   L I+YD FIRTT+  H       +K++  KGDIY+  Y
Sbjct: 146 KGRAPKEHCDAVAAEYQLLWKELGIAYDKFIRTTDSHHETLVDEFYKRVEAKGDIYQAKY 205

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++DE+    +         P +   E+ YFF LS YQ  L     S+P
Sbjct: 206 EGLYCVNCEEYKDEDELI---EDLCCPIHRKPCEARNEDNYFFALSKYQQPLEELLSSNP 262

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---T 241
            F+ P  R NEV  +VK GL+D S+SR   +WGI +P +P+  +YVW DAL  Y++    
Sbjct: 263 NFVRPSFRMNEVQGWVKEGLRDFSISRAAVEWGIPVPTNPKQTIYVWFDALLGYISALLP 322

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G       +  + WPA +H+IGKDILRFHA+YWPA L+SA+LPLP+ VF HGF+   G 
Sbjct: 323 EGKEPILTNATERGWPASVHIIGKDILRFHAVYWPAMLMSADLPLPEAVFGHGFLTKDGL 382

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN I+P E++ + G D++RY+ ++EI  GKDG + +    + VNA+LAN IGNL
Sbjct: 383 KMGKSLGNTIEPRELVSKFGPDSVRYYFLKEIEFGKDGDFSEKRFIEIVNANLANTIGNL 442

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+ D +IP   +    +  I  + +  + + + +        A   ++ + 
Sbjct: 443 LNRTLGLLKKNCDAVIPVDSSSISEENPIRILAAESVSKAKLHYSELDYSSACDIILGIA 502

Query: 422 SEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  + Y   + PW L K      + A+  L V +E +R +A+ L   VP+L N+I+  L 
Sbjct: 503 TAGNLYMSEKAPWSLFKEGGSAAEDAAQELTVILEAVRIIAVALSPVVPELCNRIYLQLG 562

Query: 479 VADENRCFQSL----DQRLKPGFMLHKTFDPIFPRF 510
             + +    S        LK G  +     PIF R 
Sbjct: 563 FTEADFKSISWNDTQWGGLKSG-QVMADAQPIFQRL 597


>gi|158335466|ref|YP_001516638.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305707|gb|ABW27324.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 532

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 193/524 (36%), Positives = 292/524 (55%), Gaps = 18/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  +  ++T + Y N  PHIG AY  + AD +ARFHRL G +VL  TGTDEHGQKI + 
Sbjct: 4   SQTRRFALTTPLYYVNDLPHIGSAYTTMAADAIARFHRLQGHEVLLITGTDEHGQKIQRT 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G   +   D+    ++D+   L+I YD F RTT  RH       ++++ DKGDI +
Sbjct: 64  AEQRGKAPQDHCDEIVAGYKDLWQRLNIQYDRFSRTTSPRHGQIVAEFFQRVWDKGDICQ 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + ++    +  +      PV+W +E+ YFFRLS YQD LL  + 
Sbjct: 124 GHQQGWYCVGCEEFKEERDL---LEDNHCPIHKRPVEWRDEQNYFFRLSKYQDDLLQLFA 180

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             P+FI P  RRNEV+SFV+ GL+D S+SR   DWG  +P D Q+ +YVW DAL  Y+T 
Sbjct: 181 DQPDFIQPTSRRNEVLSFVERGLQDFSISRVNLDWGFPVPADDQHTLYVWFDALLGYVTA 240

Query: 242 TGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D          ++WP +LH+IGKDILRFHA+YWPA L+SA+LPLP +VF HGF+  
Sbjct: 241 LLDEDTEPTLDQALSQWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPDRVFGHGFLTK 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DP+E+++  G DA+RY+ ++ +  G+DG + +      VNADLAN +
Sbjct: 301 DGQKMGKSLGNTLDPVELVDRYGTDAVRYYFLKALEFGRDGDFSETRFIDVVNADLANSL 360

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++ M +K  +G +P     +   D  +  +  +   ++ +  QN    +A    
Sbjct: 361 GNLLNRTLKMAVKYCNGQVPDIDIQSIPEDHPLAQLGRKAGDQVAKAYQNLNFSQACNIS 420

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   +++ D Q PW L K       + +LY  +E +R  A LL   +P L+ +I+  
Sbjct: 421 LGLVKAGNQFIDEQAPWSLYKKGEQGLVNEILYTVLESVRLSAYLLTPVIPNLSTQIYQQ 480

Query: 477 LFV--------ADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           L            +     S+  +    P   +  T  P+F + 
Sbjct: 481 LGFKLDLNVNHDGDETTLHSIHSNWGGLPANQILGTPQPVFQKL 524


>gi|303232822|ref|ZP_07319506.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481012|gb|EFL44088.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 562

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 204/542 (37%), Positives = 298/542 (54%), Gaps = 34/542 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   YI+T I Y NA PH+G AY  ++ DV AR+ R  G +V F TG DEHG+K+A+AA
Sbjct: 17  NQPSYYITTPIYYVNAAPHLGTAYCTLLCDVQARYRRSMGYNVRFLTGMDEHGEKVAQAA 76

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G + + + D  +  F+D+   L+ISYDDFIRTTE R +   + LW ++ + G +YKG
Sbjct: 77  QEHGYSPQEWCDAQAPLFKDLWKTLNISYDDFIRTTEPRQYKAVQTLWNRMRESGYLYKG 136

Query: 123 CYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y GWY L  E Y+   ++      ++ AD         P++ +EEE YFF+LSA+QD+L
Sbjct: 137 TYDGWYCLPCETYFTPTQLSHAAQEHQRADEHLCPDCQRPLKRVEEESYFFKLSAFQDRL 196

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L  Y  HP+F+ P  R NEV SFV+ GL+DLS+SR +FDWGI +P D +++ YVW DAL 
Sbjct: 197 LELYAKHPDFVQPTFRMNEVRSFVEGGLQDLSVSRTSFDWGIPVPFDTKHVTYVWFDALL 256

Query: 237 NYLTTTGY---LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           NY+T+  Y           A  WPA  HV+GKDI+RFH I WPA L++ N  LP+ VF+H
Sbjct: 257 NYMTSVFYGEDDPIRKNQFAFRWPAQCHVVGKDIIRFHCIIWPAMLMAINEALPEHVFAH 316

Query: 294 GFILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           GF+  +       EK+SKS GN I P EVI+ +G+D  RY+ + ++  G+D     D +K
Sbjct: 317 GFLTVRNSETGNAEKMSKSRGNAIAPQEVIDLLGIDGYRYYFMCDVIHGEDSAISFDRMK 376

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC--SRVLQEIRENM 405
           +  NADLAN  GNLVSR++SM  K +DG  P        + ++L       +  +    M
Sbjct: 377 QVYNADLANSWGNLVSRTLSMCAKYFDGQTPAIFDGWHDEHNVLRDIVDDGLFADYSAAM 436

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT------NPDRASTVLYVTVEVIRQLA 459
           +      A   V+ L+   + Y +   PW L KT      +  + + V+   +E IR  A
Sbjct: 437 EQMRYADAKEAVMKLIHAANHYIEDMAPWTLAKTAATNDKDAQQLARVMLNLLESIRIAA 496

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQS------LDQRLKPGFMLHKTF-----DPIFP 508
            LL   +P  ++++   + +  E     S      + ++L     L          P+FP
Sbjct: 497 HLLAPIMPHTSHEVLCRMGLEPEAEILNSCLSIDLILEKLCAWGGLSAPCAVVCDAPLFP 556

Query: 509 RF 510
           R 
Sbjct: 557 RI 558


>gi|289547973|ref|YP_003472961.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181590|gb|ADC88834.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 489

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 207/511 (40%), Positives = 305/511 (59%), Gaps = 29/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y++T I Y N  PHIGHAY  + AD LARF+R+ G +V F TGTDEHG KI K A+  
Sbjct: 2   KFYVTTPIYYVNDVPHIGHAYTTVAADTLARFYRMRGYEVFFLTGTDEHGLKIQKTAEEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  K   DQN+ NF ++   ++ISYD FIRTT+  H +  R +++K  ++GDIY G Y 
Sbjct: 62  GVHPKDLADQNASNFMELWRFMNISYDRFIRTTDPDHQEVVREMFQKSWERGDIYLGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E+    +G+       P +++ E  YFFRLS YQ+ LL  YE  P+
Sbjct: 122 GWYCVGCEEFKSESEL---LEGKLCPLHLKPCEYVREPSYFFRLSKYQEALLKLYEEMPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           F+ P  R  EV+SFV  GL+DLS++R      WGI++P D ++ +YVW DAL NY     
Sbjct: 179 FVRPEHRLREVVSFVSMGLRDLSVTRPASRVRWGIRVPFDEEHTIYVWFDALFNY----- 233

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              +    +   WPADLH++GKDILRFHA+YWPAFL+S  L +P+ VF+HG+   +G+K+
Sbjct: 234 --VSAVRERMHLWPADLHLVGKDILRFHAVYWPAFLMSVGLDIPRTVFAHGWWKVEGQKM 291

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+ P+++++E G+D +RYFL+R++  G DG   +D + KR+N +LAN IGNLVS
Sbjct: 292 SKSLGNVVSPVDLVKEYGLDPVRYFLLRDMPFGDDGDLRRDNILKRINGELANEIGNLVS 351

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R +SM+LK          A    D     VC   ++   E M     + AL +V+   S 
Sbjct: 352 RVLSMVLKY-----TQGKATGGKDAQYEKVCGETIKRYEELMGRVDFYNALEEVLKFSSY 406

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +++Y D++ PW++ K        VLY  V+    +  LL  FVP+   K+   + +    
Sbjct: 407 LNKYVDSKAPWQMAKVGDPSLDDVLYTLVDGCFVVGYLLYPFVPQSMEKLMQAIGI---- 462

Query: 484 RCFQSLDQRLKP----GFMLHKTFDPIFPRF 510
              + L Q+++P    G+ + +  + +FPR 
Sbjct: 463 ---EKLPQQIRPYSFAGYTVREKVN-LFPRI 489


>gi|67921186|ref|ZP_00514705.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67857303|gb|EAM52543.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 535

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 194/524 (37%), Positives = 291/524 (55%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +K  ++T + Y N  PHIG AY  IIADV+AR  RL G +VL  TGTDEHGQKI + 
Sbjct: 6   TKPKKFALTTPLYYVNGVPHIGSAYTTIIADVIARHKRLIGDEVLLITGTDEHGQKIQRT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+  +   D+   +F ++   L+I YD F RTT  +H    +  ++++ + GDIY 
Sbjct: 66  AEEKGLAPQKHCDEIVSSFEELWQKLEIQYDRFSRTTASKHEVIVKEFFERVWENGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               GWY +  E +    E+    DG      +   +W +EE YFF+LS YQ KL   YE
Sbjct: 126 AQQQGWYCVACEEFKEKRELL--EDGCCPIHTNKKAEWRDEENYFFKLSKYQTKLEELYE 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P  RRNE+++FV  GL+D S+SR   +WG  IP DP + +YVW DAL  Y+T 
Sbjct: 184 KNPQFIQPESRRNEILNFVNQGLQDFSISRVNLEWGFPIPKDPSHTIYVWFDALLGYVTA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               +         + +WP +LH+IGKDILRFHAIYWPA L+SA LPLP KVF HGF+  
Sbjct: 244 LLEPEAEPTLNNALSTWWPINLHLIGKDILRFHAIYWPAMLMSAELPLPDKVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ K+LGN +DP  ++++ G DA+RY+ ++EI CGKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKTLGNTLDPFALVDKYGADAVRYYFLKEIECGKDGDFNETRFVNILNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL-QEIRENMQNQLIHRALAQV 417
           GNL++R++ M  K   G +P   A     E  L      L +++ +  +    +    ++
Sbjct: 364 GNLLNRTLGMTKKYCKGSLPELTAAELPQEHPLKTIGLTLGEKVIKAYETLKFNEGCEEI 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++L+   +++ D Q PW L K         +LY  +E +R  A LL   +P L++KI++ 
Sbjct: 424 LTLIRAGNKFIDEQAPWRLFKEGKQAEVEQILYGVLESVRLAAYLLAPIIPNLSSKIYEQ 483

Query: 477 LFVADENRCFQSLDQRLKPGF----------MLHKTFDPIFPRF 510
           L  + +      L+Q +                     PIF + 
Sbjct: 484 LGFSVDFNQSDRLNQVIPFTHHSQWGKLAVNQNLSKPQPIFAKL 527


>gi|242279644|ref|YP_002991773.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242122538|gb|ACS80234.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 646

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 207/512 (40%), Positives = 306/512 (59%), Gaps = 16/512 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I+T I Y NA+PH+GHAY  I+AD + RFH+L G +  F TGTDEHG KI +AA+  G
Sbjct: 4   FFITTPIYYVNAKPHLGHAYTTILADSMNRFHKLLGDETFFLTGTDEHGDKIVQAAEKGG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            T + +VD+ S  F  +   L I  DDFIRTT++RH    + + +K+ DKGDIY G Y G
Sbjct: 64  QTPREYVDEISSLFSGLWPGLQIENDDFIRTTQERHIKCVQEVLQKVYDKGDIYFGEYGG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y + E+    DG+    +  P +++ E+ YFF++S YQD L+++   +PEF
Sbjct: 124 HYCFGCERFYTEKELV---DGKCPQHETVP-EYIAEKNYFFKMSKYQDWLIAHINDNPEF 179

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           I P   RNEV+S +KSG L+DL +SR     +WGI++P D +++ YVW DAL NY+T   
Sbjct: 180 IRPERYRNEVLSLLKSGELEDLCISRPKSRLEWGIELPFDDKFVTYVWFDALINYITALE 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D     K  FWP   H++ KDIL+ HAI+WP  L +A +   + +  HG+ L K  K+
Sbjct: 240 YPDGEKYEK--FWPKANHLVAKDILKPHAIFWPTMLKAAEIEPYQHLNVHGYWLIKDTKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+ P+E+ E+ GV+A RYFL+RE+  G D  + ++ L  R+NADLAN +GNL S
Sbjct: 298 SKSLGNVVSPLEMAEKYGVNAFRYFLLREMVFGNDSSFSEEALVGRLNADLANDLGNLFS 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++SM  K ++G +P  G   + D  I S+  + + E + N  +    R L  +  LV  
Sbjct: 358 RTLSMTHKYFEGKVPAQGDEADEDCEIKSLGRKAMAEFQNNFIDAKFSRGLEGLWELVRG 417

Query: 424 VDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--A 480
           +++Y D  +PW L K  N  R  TV+YV +E +R++A+ L   +P+ +  +   L +  A
Sbjct: 418 LNKYIDTTQPWTLYKEENMSRLGTVMYVLLENMRKIAVHLWPVMPEASEMMLGQLGIQFA 477

Query: 481 DENRCFQ---SLDQRLKPGFMLHKTFDPIFPR 509
            E    Q    +   L PG  + K  + +FPR
Sbjct: 478 PEKVNLQGEIDVWGLLDPGTEVAKKSN-LFPR 508


>gi|119487032|ref|ZP_01620904.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
 gi|119455961|gb|EAW37095.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
          Length = 534

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 198/529 (37%), Positives = 293/529 (55%), Gaps = 22/529 (4%)

Query: 1   MKEREK---LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+ ++      ++T + Y N  PH+G AY  + AD +ARF RL G  VL  TGTDEHGQK
Sbjct: 1   MEPKKTENLFTLTTPLYYVNDVPHVGSAYTTMAADAVARFQRLQGKSVLLITGTDEHGQK 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I + A++   + +   DQ   +F  +   LDI YD F RTT+ RH    +  + ++ D+ 
Sbjct: 61  IERTAESLNRSPQEHCDQIVSSFESLWHKLDIQYDRFSRTTDSRHAAIVKEFFGRVWDQE 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           DIY     GWY +  E +  + E+    +       +  V+W +E+ YFFRLS YQ +L 
Sbjct: 121 DIYLSQQQGWYCVACEEFKEERELI--DEKYCPIHTNKQVEWRDEQNYFFRLSKYQKQLE 178

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           + Y+  P+FI P  RRNEV++FV  GL+D S+SR   DWG  +P DP   +YVW DAL  
Sbjct: 179 ALYQEQPDFIQPESRRNEVLNFVSQGLQDFSISRLNVDWGFPVPVDPNQTIYVWFDALLG 238

Query: 238 YLT---TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           Y+T           + + +K WP  LH+IGKDILRFHA+YWPA L+SA++PLP ++F HG
Sbjct: 239 YVTALLDPDREATLENALSKGWPISLHLIGKDILRFHAVYWPAMLMSADIPLPGRIFGHG 298

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+   G+K+ KSLGN +DP+E++ + G DA+RY+ ++EI  G+DG ++       VNADL
Sbjct: 299 FLTKDGKKMGKSLGNTLDPVELVRQFGSDAVRYYFLKEIEFGQDGDFNLTRFINTVNADL 358

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN +GNL++R++ M  K ++G IP   GA    D  + S    + Q + +  +       
Sbjct: 359 ANDLGNLLNRTLRMAHKYFEGRIPHVSGAVIPEDNPLKSYGVTLGQTVAQGYERLAFSEV 418

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
              +++LV   ++Y D Q PW L K    D   +VLY  +E +R  A LL    P L+N 
Sbjct: 419 CDAILNLVQAGNKYIDEQAPWALYKQEKLDLVESVLYSVLESVRLAAYLLSPITPNLSNG 478

Query: 473 IFDILFVA---------DENRCFQ--SLDQRLKPGFMLHKTFDPIFPRF 510
           I+  L  +         +    F   +L   L P  +L +   P+F R 
Sbjct: 479 IYHQLGFSIDFNDKTAIETAATFATHALWGFLPPEQVLAEP-QPVFLRL 526


>gi|218777886|ref|YP_002429204.1| methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218759270|gb|ACL01736.1| Methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 643

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 193/515 (37%), Positives = 279/515 (54%), Gaps = 17/515 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y NA+PH+GHAY  I+AD   R+H+L G D  F TGTDEHG K+ +AA+  
Sbjct: 4   PFYITTPIYYVNARPHLGHAYTTIVADTAKRYHQLRGQDAYFLTGTDEHGDKVVEAAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               + +VD  S  FR++   L IS D FIRTT+  H    + + +KI D GDIY   Y 
Sbjct: 64  NKEVRDYVDMISGLFRNLWPELLISNDQFIRTTDADHIKVVQEVLQKIYDNGDIYFSEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +Y + E+    DG+  + +  P + ++E  YFFR+S YQD L+ + + +P 
Sbjct: 124 GLYCFGCERFYLEREL---VDGKCPDHEVEP-KKIKESNYFFRMSKYQDWLIDHIKKNPG 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P    NEV+SF+K  L+DL +SR      WGI +P D  Y+ YVW DAL NY +  G
Sbjct: 180 FIRPQRYANEVLSFLKEPLEDLCISRPKTRLTWGIDLPFDENYVTYVWFDALLNYASALG 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y         K+WP   HV+ KDIL+ H IYWP  + +A +P+   +  HG+      K+
Sbjct: 240 Y--PEGEKFQKYWPGVQHVVAKDILKPHGIYWPTMMKAAGIPVYNHLNVHGYWNVADSKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++P+E+ ++ G++  RYFL+RE+  G D  + ++ L  R+N+DLAN +GNL S
Sbjct: 298 SKSLGNVVEPLELSKKYGIEQFRYFLMREMTFGLDSSFSEEALVGRINSDLANDLGNLFS 357

Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           R +SM  K   G +P   P    +SD  +       ++     M     H+ LA V   +
Sbjct: 358 RVISMAHKFCKGTVPENHPDLAFDSDWKLSDAAMEAVEAYDLAMDEFQFHKGLAAVWEFI 417

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S +++Y D   PW L K     A    V+Y  +E +R +A ++   +P  A K+   L +
Sbjct: 418 SRMNKYVDFTSPWVLAKDKAAAAQLEAVMYNLLEGLRLVAGMVWPVLPNAAEKMVGHLGL 477

Query: 480 ADENRCFQSL----DQRLKPGFMLHKTFDPIFPRF 510
             +     S        LKPG  L K    +FPR 
Sbjct: 478 DKDAFLKDSAALGEWGVLKPGTQLQKAVT-LFPRI 511


>gi|113475475|ref|YP_721536.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166523|gb|ABG51063.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 530

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 201/524 (38%), Positives = 296/524 (56%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I+T + Y N  PHIG AY  I AD LARF RL G  VL  TGTDEHGQKI + 
Sbjct: 6   TDKNTFAITTPLYYVNDLPHIGSAYTTIAADTLARFQRLQGRSVLMITGTDEHGQKIQRT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+N G   K   D   R F  + + L+I YD FIRTT   H    +  ++++ +K DIY 
Sbjct: 66  AENKGRNPKEHCDSVVRGFESLWEQLNIQYDRFIRTTAPNHEKIVKEFFQRVWEKEDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               GWY +  E +  + E+    D       +  V+W +E+ YFFRLS YQ++L ++Y+
Sbjct: 126 SQQKGWYCVSCEEFKEERELT--EDKHCVIHTNQKVEWRDEQNYFFRLSRYQERLQAFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              EFI P  RRNEV+SFV  GL+D S+SR   DW  K+P D  + +YVW DAL  Y+T 
Sbjct: 184 DRQEFIQPQSRRNEVLSFVNQGLQDFSISRVNVDWAFKLPVDSSHTIYVWFDALLGYVTA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D+    +   +K+WP +LH+IGKDILRFHA+YWPA L+SA+LPLP++VF HGF+  
Sbjct: 244 LLDPDSEPTLENALSKWWPINLHLIGKDILRFHAVYWPAMLMSADLPLPERVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSL N +DP E+I++ G DA+RY+ ++EI  G DG ++++     +NADLAN +
Sbjct: 304 DGKKMGKSLNNTLDPFELIQKYGSDAVRYYFLKEIEFGVDGDFNENRFINVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++ M  K ++G IP       E    +  +   + +++ +   +    +    V
Sbjct: 364 GNLLNRTLKMAHKYFNGQIPKINVQEVEVTHPLKKIGMGLGEKVTQAYTSLDFSQVCEAV 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   ++Y D   PW L K    +  + VLY  +E +R +A LL   +P ++N I+  
Sbjct: 424 LILVRTGNKYIDETAPWSLYKQGQLEALTEVLYSVLESVRLVAYLLSPIIPNISNAIYQQ 483

Query: 477 LFVA---DENRCFQSLDQRLK-------PGFMLHKTFDPIFPRF 510
           L  +   ++     S +  +K       PG  L     PIF R 
Sbjct: 484 LGFSNNFNDKSAINSSETFVKQVSWGALPGNQLLGQPQPIFQRI 527


>gi|283850590|ref|ZP_06367878.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574161|gb|EFC22133.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 650

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 195/512 (38%), Positives = 287/512 (56%), Gaps = 14/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+T I Y NA+PH+GHAY   +AD LARFH L G DV F TGTDEHG KIA+AA+ A
Sbjct: 3   RFFITTPIYYVNAKPHLGHAYTTTVADSLARFHALLGEDVYFLTGTDEHGDKIAEAAKAA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K + D  S  F  +   L I+   FIRTT+  H +  R   +++ DKGDIY G Y 
Sbjct: 63  GQTPKEYADAISGLFSSLWPRLGITPSRFIRTTDADHKEAVRRALQQVYDKGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  D E+    DG   + +  P +++ E+ YFFR+S YQ  LL +  ++P+
Sbjct: 123 GHYCKGCERFLTDKELV---DGLCPDHKVKP-EYIAEKNYFFRMSKYQGALLDHIRANPD 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P + RNEV+S ++SG L+DL +SR      WGI++P D  ++ YVW DAL NYLT  
Sbjct: 179 FIRPRQYRNEVVSLLESGALEDLCISRPKSRLTWGIELPFDANFVTYVWFDALINYLTAI 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D P    +++W A  H++ KDIL+ HAI+WP  LL+ +LPL K++  HG+ L +  K
Sbjct: 239 GWPDAP--DFSQWWGAAEHLVAKDILKPHAIFWPTMLLAMDLPLYKRLNVHGYWLVRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P+++  + G+  +RYF +RE+  G D  Y  +    R NADLAN +GNL 
Sbjct: 297 MSKSLGNVVEPLDMAAKAGLSGMRYFFLREMVFGSDASYSDEAFIGRFNADLANDLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K +  ++P       +D  +  +     Q            RAL  +  LV 
Sbjct: 357 NRTLAMTAKYFGSVVPAATESDPADGELSRLALDATQNFVALFGAAQFSRALKALWELVR 416

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++Y DA  PW L K    +R  TV+   +  +R+ A  L   +P+ A K+   L    
Sbjct: 417 GLNKYVDAMAPWTLFKEGRTERLGTVMATALGGLRRAAACLLPVMPEAAEKLLAQLGQDP 476

Query: 482 ENRCFQSLDQRLKP---GFMLHKTFDPIFPRF 510
                 +      P   G  +  T + +FPR 
Sbjct: 477 AAIRLDAEAAGFAPLAAGTAVAATSN-LFPRL 507


>gi|157737467|ref|YP_001490150.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157699321|gb|ABV67481.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 650

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 200/517 (38%), Positives = 318/517 (61%), Gaps = 14/517 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  + +YI+T I Y N   HIGHAY  IIAD+LAR+ RL G +    TGTDEHGQKIA
Sbjct: 1   MQESCKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGSNTFLLTGTDEHGQKIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           ++A+    T K + D+ S  FR + D  DI+YD FIRTT++ H    +  ++ +  KGDI
Sbjct: 61  QSAEIRNKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G+Y +  E ++ + ++    D Q+          ++EE YFF LS Y++KLL +
Sbjct: 121 YKGEYEGFYCVPCETFFPESQL---VDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKW 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALT 236
           YE + + ILP  ++NE+++FVK GLKDLS+SR +F WG+K+    ++P+++MYVW+DAL 
Sbjct: 178 YEENEDCILPRSKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALL 237

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D     FWPA++H++GKDILRFH+IYWPAFL+S +LPLPK + +HG+ 
Sbjct: 238 NYITALGY--GTDDKNMNFWPANIHLVGKDILRFHSIYWPAFLMSLDLPLPKHIAAHGWW 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKS GN+++P EV +  G+DA RYF++RE+  G+DG + +  L  R+N+DL N
Sbjct: 296 TRDGEKMSKSKGNIVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALIDRINSDLGN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL++R   M  K +D  + +     +  +  L   + +L  +++ + N  I+R L +
Sbjct: 356 DLGNLLNRISGMSGKYFDYKVSSVD-VEKFHKKELDEVNEILDGVQKYIYNMQINRYLEE 414

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  +++  ++  +  +PW L K      A  ++ +   ++ ++A+LL + +P+    I  
Sbjct: 415 IWKVLTIANKAINDYEPWNLIKDGKNAEAMALVALITNIMAKVALLLDSVMPEKIKLIAQ 474

Query: 476 ILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            L +      F +L  ++ L    ++ K  + +FPR 
Sbjct: 475 SLGMNINTETFNNLIINKELLADTVITK-VEQLFPRI 510


>gi|315637191|ref|ZP_07892413.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315478558|gb|EFU69269.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 650

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 200/517 (38%), Positives = 317/517 (61%), Gaps = 14/517 (2%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  + +YI+T I Y N   HIGHAY  IIAD+LAR+ RL G +    TGTDEHGQKIA
Sbjct: 1   MQESCKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGSNTFLLTGTDEHGQKIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           ++A+    T K + D+ S  FR + D  DI+YD FIRTT++ H    +  ++ +  KGDI
Sbjct: 61  QSAEIRNKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YKG Y G+Y +  E ++ + ++    D Q+          ++EE YFF LS Y++KLL +
Sbjct: 121 YKGEYEGFYCVPCETFFPESQL---VDEQFCPDCGRATTLVKEESYFFELSKYEEKLLKW 177

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALT 236
           YE + + ILP  ++NE+++FVK GLKDLS+SR +F WG+K+    ++P+++MYVW+DAL 
Sbjct: 178 YEENEDCILPRSKKNEIVNFVKGGLKDLSISRTSFSWGVKLPESMNEPKHVMYVWLDALL 237

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY    D     FWPA++H++GKDILRFH+IYWPAFL+S +LPLPK + +HG+ 
Sbjct: 238 NYITALGY--GTDDKNMNFWPANIHLVGKDILRFHSIYWPAFLMSLDLPLPKHIAAHGWW 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              GEK+SKS GN+++P EV +  G+DA RYF++RE+  G+DG + +  L  R+N+DL N
Sbjct: 296 TRDGEKMSKSKGNIVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALIDRINSDLGN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL++R   M  K +D  + +     +  +  L   + +L  + + + N  I+R L +
Sbjct: 356 DLGNLLNRISGMSGKYFDYKVSSVD-VEKFHKKELDEVNEILDGVEKYIYNMQINRYLEE 414

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  +++  ++  +  +PW L K      A  ++ +   ++ ++A+LL + +P+    I  
Sbjct: 415 IWKVLTIANKAINDYEPWNLMKDGKNAEAMALVALITNIMAKVALLLDSVMPEKIKLIAQ 474

Query: 476 ILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            L +      F +L  ++ L    ++ K  + +FPR 
Sbjct: 475 SLGMNINTETFNNLIINKELLADTVITK-VEQLFPRI 510


>gi|325115535|emb|CBZ51090.1| methionine--tRNAligase, related [Neospora caninum Liverpool]
          Length = 982

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 201/510 (39%), Positives = 293/510 (57%), Gaps = 12/510 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K RE+ YI+TAI Y N  PH+GH YE + +DV+ARFHR+ G +V F TGTDEHGQKIA  
Sbjct: 271 KTRERFYITTAINYTNGPPHMGHVYEAVTSDVVARFHRIAGKEVFFLTGTDEHGQKIANT 330

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F++M   L IS D +IRTT+  H   C+ LWK++ +KGDIY 
Sbjct: 331 AERVGKTPQEICDFFAAGFQEMNKKLHISNDQYIRTTQADHKAVCQWLWKRVQEKGDIYL 390

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWY+ R+E +    E+              P+Q MEE  YFFR+S YQ++LL +  
Sbjct: 391 DTYVGWYNEREETFV--SEIEARLTDYKDPTSGKPLQKMEEASYFFRMSKYQERLLKHIH 448

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTNY + 
Sbjct: 449 DNPDFIRPEERRKNILKRLEEPLLDLSCSRTTFTWGVPVPGDEKHVMYVWFDALTNYYSA 508

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
                  DG+++ FWPA++H+IGKDI+ FH + WP  L++A LPLPK VF HGF+    G
Sbjct: 509 ---TAMNDGARSAFWPANVHIIGKDIIWFHTVIWPCMLMAAELPLPKCVFGHGFVTAADG 565

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP ++++E   D+ R++LVRE   G D  +D+D L    NA+LA+ +GN
Sbjct: 566 EKMSKSLGNVVDPNDILKEHDADSFRFYLVRETKYGNDLRFDEDALTATTNAELADTLGN 625

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+ S+ +K   G +P         ++  S  +  + E+   ++   +  AL   ++ 
Sbjct: 626 LVHRATSLCVKFCGGRVPAV-PLPAGGKAPFS-IADTVGEMERLVEQFALREALEAAMNA 683

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             E +++     PW L   +P     V+   +E +  LA LL+ F+P  +  IF  L   
Sbjct: 684 CREANKFVTDWAPWSLP--DPVEKQRVVRGALEAVFVLAHLLEPFIPVTSAHIFKKLNTQ 741

Query: 481 DENRC-FQSLDQRLKPGFMLHKTFDPIFPR 509
                        L PG  +    D +F +
Sbjct: 742 PRILADISPWFDNLTPGTAVD-VGDILFAK 770


>gi|317484604|ref|ZP_07943508.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924144|gb|EFV45326.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 662

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 195/521 (37%), Positives = 290/521 (55%), Gaps = 24/521 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I Y NA+PH+GHAY  I+AD L RFH L G D  F TGTDEHG KI KAA+ A
Sbjct: 4   TFYITTPIYYVNARPHLGHAYTTIVADSLRRFHTLLGEDTWFLTGTDEHGDKIVKAAEAA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T + FVD  S  F+ +   L I +D FIRTT+  H    +   +K+ D GDIY G + 
Sbjct: 64  GQTPQEFVDGISGQFQALWPKLGIKHDQFIRTTDADHKARVQAFLQKVYDNGDIYFGEHG 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +Y + E+  G              +++E+ YFFR+S Y   L  +   +P+
Sbjct: 124 GHYCTGCERFYTEKELENG----LCPQHLTKPDFIQEKNYFFRMSKYLPWLAGHIRENPD 179

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P   RNEV+S ++SG L+DL +SR     +WGI++P D  Y+ YVW DAL NY++  
Sbjct: 180 FIRPERYRNEVLSMIESGALEDLCISRPKNRLEWGIELPFDKDYVCYVWFDALLNYISAL 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D      A +WP + H++ KDIL+ H ++WP  L SA +PL K +  HG+ L K  K
Sbjct: 240 GWPDGD--KYAAYWPGE-HLVAKDILKPHGVFWPTMLKSAGVPLYKHLNVHGYWLIKDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++PI++ E  G+DA RYFL+R++  G D  + ++ L  R NADLAN +GNL 
Sbjct: 297 MSKSLGNVVEPIKMAEHYGLDAFRYFLLRDMQFGSDASFSEEALITRFNADLANDLGNLF 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR +SM  K ++  +P  G   E D++++ +     +   +   N    + L  +  LV 
Sbjct: 357 SRVLSMNAKYFESKVPPMGELAEDDKALIELAENSRRNYVQLFGNIRFSQGLDALWDLVR 416

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-- 479
            +++Y D+Q PW L K  +  R  TV+ + +E +R++A+ L   +P  A  + + L    
Sbjct: 417 ALNKYVDSQAPWTLFKQGDTARLGTVIRLLLECMRKVALCLWPVMPGTAAALLEQLGQPL 476

Query: 480 ----------ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                     A      + + + L  G ++  +   +FPR 
Sbjct: 477 PASERFGVAPAGNVNDEEGVWECLATGSVI-ASASNLFPRL 516


>gi|302336214|ref|YP_003801421.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320054|gb|ADK68541.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 534

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 198/528 (37%), Positives = 297/528 (56%), Gaps = 21/528 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   +I+T I Y NA+PH+G AY  ++ DV AR+ R  GLDV F TG DEHG+K+ +AA+
Sbjct: 3   KTPFFITTPIYYVNARPHLGTAYTTVLCDVQARYRRATGLDVRFLTGMDEHGEKVEEAAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G+  + + D  +  F D+   L+IS DDFIRTTE R     + LW+++ + G +YKG 
Sbjct: 63  SHGMDPQEWCDSQAPFFEDLWQTLEISNDDFIRTTEARQTRAVQYLWERMRESGYLYKGT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWY + DE Y+ + +V    +               P++ ++EE YFFRLSA+QD+LL
Sbjct: 123 YDGWYCVPDETYFTETQVSHADEERGTQGQHLCPDCGRPLERVQEESYFFRLSAFQDRLL 182

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
             Y+ HP+F++P  R  EV SFV+ GL+DLS+SR +FDWGI +P D +++ YVW DAL N
Sbjct: 183 RLYDEHPDFVMPDFRMREVRSFVEGGLQDLSVSRTSFDWGIPVPFDDRHVTYVWFDALLN 242

Query: 238 YLTTTGYLDNPDG---SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           Y+T  G+    D      A+ WPA  H++GKDI+RFH + WPA L++    LP+ VF+HG
Sbjct: 243 YMTAVGFGQGTDEAAAEFARRWPAQYHMVGKDIIRFHCVIWPAMLMAIGEALPEHVFAHG 302

Query: 295 FILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           F++ K      GEK+SKS GN I P EVI+ +GV+  RY+ + +   G+DG      +++
Sbjct: 303 FLMVKNEETGQGEKMSKSRGNAIAPEEVIDLLGVEGYRYYFMTDCVPGEDGAISFSRMEQ 362

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQN 407
             NADLAN  GNLVSRS++M  K +DG  P     ++E    +  +   +     E+M  
Sbjct: 363 VYNADLANSWGNLVSRSLNMSAKYFDGKTPQLADGWSERPNPLCDIAQGIFGRYAEHMDK 422

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAF 465
                A   V+ LV   + Y +   PW + K     +  + ++   +E IR  A LL  F
Sbjct: 423 IEYVAAKDVVMELVHAANHYIEDSAPWTVAKDPARREELAGIICSLLESIRICAHLLSPF 482

Query: 466 VPKLANKIFDILFVADENRC---FQSLDQRLKPGFMLHKTFDPIFPRF 510
           +P+ + ++   + + DE        +       G       D +FPR 
Sbjct: 483 MPQTSAEVLRRMSLGDEATTDDLAAACAWGQLAGDAPVSKGDALFPRL 530


>gi|195952737|ref|YP_002121027.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932349|gb|ACG57049.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 493

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 205/476 (43%), Positives = 293/476 (61%), Gaps = 15/476 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y++T I Y N  PHIGHAY  I AD +AR+ R  G DV F TGTDEHG K+ KAA+  
Sbjct: 2   KFYVTTPIYYVNDVPHIGHAYTTIAADTIARYKRQKGFDVFFLTGTDEHGLKLQKAAEEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K   D+N  NF+++ D L ISYD  IRTT+  H    + +  K+ ++GDIYKG Y 
Sbjct: 62  GMTPKELCDKNFENFKNLWDFLKISYDHIIRTTDDYHKAYVQEVITKVYERGDIYKGYYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y +  E +  + E+                + ++EE YFF+LS YQDKLL  Y    +
Sbjct: 122 GYYCVGCEEFKPESEIKDFD--YSCPIHKKKCELIKEETYFFKLSKYQDKLLELY--ETD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P  R+ EVI+FV+ GLKDLS++R      WGI++P D  +++YVW DAL NY++   
Sbjct: 178 FIKPDYRKEEVIAFVRQGLKDLSITRPKERVSWGIELPFDKNHVIYVWFDALFNYISALK 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +      +K +FWPAD H++GKDILRFHA+YWPAFL+S ++ LPK V++HG+   +G+K+
Sbjct: 238 F-----KNKLEFWPADFHIVGKDILRFHAVYWPAFLMSLDMELPKHVYAHGWWTVEGQKM 292

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNVI+P +V+ E G+D  RYFL+RE+A G+DG + K+ +K+R+N +LANGIGNL+S
Sbjct: 293 SKSLGNVINPYDVVNEYGLDETRYFLLREVAFGQDGDFSKEAVKRRINGELANGIGNLIS 352

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M +K             + DE    +   VL+   + M     H+AL +V+ LV  
Sbjct: 353 RTFAMCIKY----GIIKKDDIKEDEDYKKIAIEVLEAFDKYMNELQFHKALEEVMKLVDY 408

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++Y D + PW L K N      VL   ++ I     +L  F+P    ++FD L V
Sbjct: 409 LNKYVDEKAPWTLAKNNDPSLKDVLLTLIDGILLSCWMLNPFMPNKMKEVFDALGV 464


>gi|167751097|ref|ZP_02423224.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702]
 gi|167656015|gb|EDS00145.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702]
          Length = 605

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 175/476 (36%), Positives = 274/476 (57%), Gaps = 11/476 (2%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DV+F TGTDEHGQKI   A   GVT K +VD+   NF+ + + + ISYD FIRTT+
Sbjct: 1   MQGYDVMFLTGTDEHGQKIELKAAEKGVTPKEYVDEIVANFKRLWETMHISYDRFIRTTD 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
             H +T + ++KK+ +KG IYKG Y G Y    E+++ + ++  G            V+ 
Sbjct: 61  DYHIETVQKIFKKLYEKGYIYKGTYKGKYCTPCESFWTESQLVDGK----CPDCGREVKE 116

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGI 218
             EE YF RLS + DK+  +         P  R NE+++   K GL+DL +SR +F WGI
Sbjct: 117 ANEEAYFLRLSDFADKIEKFLTETDYL-QPKSRVNEMVNNFIKPGLEDLCVSRTSFTWGI 175

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            +  D ++++YVW+DAL+NY++  GY +       K+WPAD+H+  K+I+RFH+I WP  
Sbjct: 176 PVDFDSKHVVYVWVDALSNYISALGYGNEKYNDFEKYWPADMHMTAKEIVRFHSIVWPII 235

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+  +LPLPK ++ HG+I   G+K+SKS GNV+DP  + E  GVDA+RY ++R++  G D
Sbjct: 236 LMMLDLPLPKHLYGHGWINFNGDKMSKSKGNVVDPFVLCERYGVDAVRYQILRDMPYGSD 295

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +  R+NADLAN +GNLVSR+V+M  K + G +PT     + D+ ++ +   + 
Sbjct: 296 CNFTNELMLTRINADLANDLGNLVSRTVAMADKYFGGTLPTDRVSDDLDDQLIGMAQSLC 355

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIR 456
             +   ++     +AL ++  ++S  ++Y D   PW L K      R +TVLY  +E IR
Sbjct: 356 DTVTPLIEQAQHSKALEEIFKVISRANKYIDETAPWVLAKDESNNARLATVLYNLLETIR 415

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
             + LL  F+P    ++++ +    E+  F  L     L+    + K    +FPR 
Sbjct: 416 ICSALLSPFMPATMPEVWEQIGAGAEDTAFDKLGTFGVLRADVTV-KKGRVLFPRI 470


>gi|91763268|ref|ZP_01265232.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717681|gb|EAS84332.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 513

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 230/508 (45%), Positives = 343/508 (67%), Gaps = 4/508 (0%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I YP+A+PH+GHAY  I+AD  ARF R+DG +V F TGTDEHG KI +AA+ 
Sbjct: 3   KNYYITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAAER 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + F D+ S+ FRD++  L++S  DFIRTTE+RH  T + LW ++    DIY   Y
Sbjct: 63  KKIDPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWYS+ DEAYY+D+E+ +  + +   +  + V+W+EEE YFFRLS +QD+LL YYE +P
Sbjct: 123 SGWYSVSDEAYYSDEEIIEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEKNP 182

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +FI P  R+NEVISFVK GLKDLS+SRK F WGIK+P+   +++YVW+DALTNY++   Y
Sbjct: 183 DFISPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYISALNY 242

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D  D    KFWPA +H+IGKDILRFH++YWPAFL++A +PLPKKV+ HG+IL   EK+S
Sbjct: 243 PDTNDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEKMS 302

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN++DP+++IE  G+D LRY+L++E++ G DG   +D L+  +N+DLAN  GNL  R
Sbjct: 303 KSKGNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLCQR 362

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +   K+   ++P    F + D  +L+  +  L  IR  + NQ I+  +  ++S + E 
Sbjct: 363 VTAFAEKNCSSLVPDNIKFNDEDLVMLNKFTDNLDIIRTEIDNQNINYYINFIVSSLFEA 422

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++YF+ Q+PW+ KK + +R +T++Y ++E+IR+++ +L   +P    K   I  +  +  
Sbjct: 423 NKYFNDQEPWK-KKDDKNRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIFDLNIDAI 481

Query: 485 CFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            F+S+ +   L  G  ++K  D +F + 
Sbjct: 482 NFESIAKHDYLISGKPINK-IDIMFKKI 508


>gi|34556660|ref|NP_906475.1| methionyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|34482374|emb|CAE09375.1| METHIONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 649

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 204/512 (39%), Positives = 305/512 (59%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K +I+T I Y N  PHIGHAY  +I D LA ++RL G +  F TGTDEHGQKI ++AQ 
Sbjct: 3   PKSFITTPIYYVNDIPHIGHAYTTMIGDSLAHYYRLIGHETFFLTGTDEHGQKIEQSAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + + D+ S  F+ + D  +ISYD FIRTT+ +H    +  + K+ +KGDIYKG Y
Sbjct: 63  KGKTPQAYADEISGAFKSLWDRFEISYDHFIRTTDAKHKQGVQKAFLKMFEKGDIYKGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E ++   ++    D  Y          ++EE YFF LS YQ+KLL++Y+ +P
Sbjct: 123 EGHYCVSCETFFTKRQL---VDDLYCPECGKETSLVKEESYFFALSRYQEKLLAWYKENP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---PQYIMYVWIDALTNYLTT 241
           + ILP  ++NEV+ FV+SGL DLS++R +FDWG+K+P +   P+++MYVW+DAL NY+T 
Sbjct: 180 DCILPKPKKNEVMRFVESGLDDLSITRTSFDWGVKLPQEMNAPKHVMYVWLDALLNYVTA 239

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    D  +  FWPA +H++GKDILRFHAIYWPAFL+S +LPLPK V +HG+    G 
Sbjct: 240 LGY--GDDEKRMDFWPARVHLVGKDILRFHAIYWPAFLMSLDLPLPKHVAAHGWWTRNGA 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNVI+P EV +  GV+  RYF++RE+  G+DG + +  L  R+N+DL+N +GNL
Sbjct: 298 KMSKSVGNVINPQEVADAYGVEPFRYFMLREVPFGQDGDFSQKALIDRLNSDLSNDLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   M  K +D  I T    T      L     +L  +   +Q    HR L ++  + 
Sbjct: 358 LNRLGGMSGKYFDYQI-TSKEVTTFHAKELQEAELILDSLHGYIQEMQPHRYLEELWKIF 416

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  +      +PW+L K   +  +  ++ +   ++ +  ++L   +PK A KI   L + 
Sbjct: 417 TIANTAIAMHEPWKLMKEGKESQAMALVALIANLLAKATLMLSPIMPKSAAKIAQALNLE 476

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
                ++ L   + L   F    T  P+FP+ 
Sbjct: 477 ISTASYERLIIQKALLEEFTFTPTP-PLFPKI 507


>gi|220908709|ref|YP_002484020.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219865320|gb|ACL45659.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 531

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 202/524 (38%), Positives = 300/524 (57%), Gaps = 16/524 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +R+   ++T + Y N  PH+G AY  I ADV+ARF+RL G  VL  TGTDEHGQKI +
Sbjct: 3   INKRKTFALTTPLYYVNDLPHMGSAYTTIAADVIARFYRLQGEAVLLITGTDEHGQKIQR 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +   DQ    F ++   L+I+YD F RTT+ RH    +  + ++ ++GDIY
Sbjct: 63  TAERLGRTPQEHCDQVVNGFVELWQKLNITYDRFSRTTDPRHAVIVQEFFHRLWERGDIY 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G   GWY +  E +  + E+    D       H   +W +E+ YFFRLS YQD LL YY
Sbjct: 123 LGQQQGWYCVDCEEFKEERELL--KDHYCPIHIHRQAEWRDEQNYFFRLSHYQDILLDYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             HPEFI P  RRNEV+SFV+ GLKD S+SR   DWG  +P DP++ +YVW DAL  Y+T
Sbjct: 181 NKHPEFIQPESRRNEVLSFVERGLKDFSISRVNMDWGFPVPVDPRHTLYVWFDALLGYVT 240

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                    G      ++WP +LH+IGKDILRFH I WPA LLSA LPLP +VF HGF+ 
Sbjct: 241 ALLEPGEEPGLDRALQQWWPINLHLIGKDILRFHTISWPAMLLSAGLPLPDRVFVHGFLT 300

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+ KSLGN +DP+++++  G +A+RY+ ++EI  G+DG + +      +NADLA+ 
Sbjct: 301 KDGQKMGKSLGNTLDPVDLVDRFGAEAVRYYFIKEIEFGRDGDFSEPRFINILNADLADD 360

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R++ M  K   G IPT  A +  +D  + ++   V + + ++       +A   
Sbjct: 361 LGNLLNRTLKMAFKYCQGQIPTGTADSLPADHPLQALGQSVGERVAQSYAELDFTQACEI 420

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + LV + +++ D Q PW L K     + + +LY  +E +R  A LL   +P +A +I+ 
Sbjct: 421 ALELVRKGNKFVDEQAPWSLYKQGQYQQVNQILYSVLESVRLAAYLLSPIIPAIATEIYY 480

Query: 476 ILFVAD--ENRCFQSLD-------QRLKPGFMLHKTFDPIFPRF 510
            L   D   ++ + +L          + P     +   PIF + 
Sbjct: 481 QLGFDDSFNHQDYSTLPAYAAHARWGVLPDGQPLRQPQPIFQKI 524


>gi|239905442|ref|YP_002952181.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239795306|dbj|BAH74295.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 651

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 198/516 (38%), Positives = 286/516 (55%), Gaps = 22/516 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +I+T I Y NA+PH+GHAY  I+AD LARFHRL G DV F TGTDEHG KIA+AA  A
Sbjct: 3   RFFITTPIYYVNAKPHLGHAYTTIVADALARFHRLCGEDVFFLTGTDEHGDKIAEAAAKA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K + D  S  F  +   L I+   FIRTT+  H D  R   + + DKGDIY G Y 
Sbjct: 63  GQTPKEYADAISGLFSSLWPDLGITPTRFIRTTDTDHIDAVRRALQLVYDKGDIYFGEYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG   + +  P  ++ E+ YFFR+S YQ +LL + +++P+
Sbjct: 123 GHYCTGCERFLTEKELV---DGLCPDHKVKP-DYIAEKNYFFRMSKYQGQLLEHIKANPD 178

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           FI P + RNEV+S ++SG L DL +SR      WG+++P D  ++ YVW DAL NYLT  
Sbjct: 179 FIRPRQYRNEVVSLLESGALDDLCISRPKSRLTWGVELPFDANFVTYVWFDALINYLTAV 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+ D P      +W A  H++ KDIL+ HA++WP  LL+ +LPL K +  HG+ L +  K
Sbjct: 239 GWPDAP--DFGAWWGAAEHLVAKDILKPHAVFWPTMLLAMDLPLYKHLNVHGYWLVRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P E+    G+  +RYFL+RE+  G D  + ++G   R NADLAN +GNL 
Sbjct: 297 MSKSLGNVVEPREMAGRAGLSGMRYFLLREMVFGADASFTEEGFVGRFNADLANDLGNLA 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K +  ++P       +D  +  +    +       +     RAL  +  LV 
Sbjct: 357 NRTLAMTAKYFGSVLPAGQEADPADGELAQLAETAVANYLALFRQAQFSRALDALWELVR 416

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480
            ++RY DA  PW L K    DR +TV+   +  +R +A  L   +P+ A  +   L    
Sbjct: 417 GLNRYVDATAPWTLFKEGRTDRLATVMRSALGGLRTVAACLSPVMPEAAATLLTQLGQDP 476

Query: 481 ------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 DE + F  L    +           +FPR 
Sbjct: 477 AAVNLMDEAKGFAPLAAAAQVAAT-----SNLFPRL 507


>gi|71746704|ref|XP_822407.1| methionyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70832075|gb|EAN77579.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 773

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 215/522 (41%), Positives = 311/522 (59%), Gaps = 22/522 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            ++++ I Y NA PHIGH Y  +I DV+ R+HR+ G  V   TGTDEHGQK+A+AA+   
Sbjct: 242 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEAAKQKQ 301

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+   F    +  F+   + +D S D FIRTT ++H    + LW K+  KGDIY G Y G
Sbjct: 302 VSPYDFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEG 361

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WYS+ DE++     +  G D      +      + V W+ EE Y FRLSA++++LL +Y 
Sbjct: 362 WYSISDESFLTPQNITDGVDKDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERLLEWYH 421

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWIDALTNY 238
           ++P  I+P  RR EVI  V+ GL DLS+SRK     +W I +P +P + +YVW+DALTNY
Sbjct: 422 ANPGCIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLDALTNY 481

Query: 239 LTTTGYLDN---------PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           LT +    +          D S+ + +PAD+HVIGKDIL+FHAIYWPAFLLSA LPLPKK
Sbjct: 482 LTGSRLRVDESGKEVSLADDFSELERFPADVHVIGKDILKFHAIYWPAFLLSAGLPLPKK 541

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + +HG+     +KISKSLGNV DP+E  EE G DAL+YFL+RE     DG Y    +  R
Sbjct: 542 IVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDKNMIAR 601

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +N +LA+ +GNLV R  S  + + +G  P+P A+TE DES++ +   +            
Sbjct: 602 LNGELADTLGNLVMRCTSAKI-NVNGEWPSPAAYTEEDESLIQLIKDLPGTADHYYLIPD 660

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           I +A+  V  ++  ++ Y     PW+L KT+P+R  TVLY+T+E +R   +LL   +P+ 
Sbjct: 661 IQKAIIAVFDVLRAINAYVTDMAPWKLVKTDPERLRTVLYITLEGVRVTTLLLSPILPRK 720

Query: 470 ANKIFDILFVADENR-CFQSLD-QRLKPGFMLHKT--FDPIF 507
           +  IFD+L V + +R   ++ +   + PG  L      + +F
Sbjct: 721 SVVIFDMLGVPEVHRKGIENFEFGAVPPGTRLGPAVEGEVLF 762


>gi|15233258|ref|NP_191100.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|7076783|emb|CAB75898.1| methionyl-tRNA synthetase (AtcpMetRS) [Arabidopsis thaliana]
          Length = 616

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 190/519 (36%), Positives = 286/519 (55%), Gaps = 12/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA 
Sbjct: 65  VDEGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIAT 124

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY
Sbjct: 125 SAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L    
Sbjct: 185 RADYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDIL 241

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y++
Sbjct: 242 AQNPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYIS 301

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                +     +   +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ 
Sbjct: 302 ALTEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLT 361

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN 
Sbjct: 362 KDGMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANT 421

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V
Sbjct: 422 IGNLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAV 481

Query: 418 ISLVSEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +  + Y D + PW L K      + A+  L + +EV+R +A+ L    P L+ +I+
Sbjct: 482 LEIGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRIY 541

Query: 475 DILFVADE---NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             L   ++   +  +         G  + +   P+F R 
Sbjct: 542 SQLGYTEDQFNSITWSDTKWGGLKGGQVMEQASPVFARI 580


>gi|298529104|ref|ZP_07016507.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510540|gb|EFI34443.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 640

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 176/513 (34%), Positives = 284/513 (55%), Gaps = 15/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  ++ST I Y NA+PH+GHAY  I+AD + R HRL   D  F TGTDEHG KI +AA+ 
Sbjct: 2   ESFFVSTPIYYVNARPHLGHAYTTIVADSINRLHRLRQKDTFFLTGTDEHGDKIVEAAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K + D+ S  F++    L++    FIRTT+  H    +     + + GDIY G Y
Sbjct: 62  NGLAPKEYADRISALFKEAWPWLEVENSAFIRTTDPEHVKCVQRFLNTVYENGDIYFGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y    E +Y + E+    DG   +    P ++++EE YFFR++ Y   L  +  +HP
Sbjct: 122 GGHYCFGCECFYMEKELQ---DGLCPDHLEKP-RYLKEENYFFRMTRYLPALREHILNHP 177

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           EFI P   RNEV+  +   L DL +SR      WGI++P D  ++ YVW DAL NY++  
Sbjct: 178 EFIQPERYRNEVLGMLGDELTDLCISRPKSRLTWGIELPFDSNFVTYVWFDALINYISAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+      +  ++WP   H++ KDIL+ HA++WP  L+SA + L + +  HG+   +  K
Sbjct: 238 GWPHGE--AFKRYWPGAYHLVAKDILKPHAVFWPTMLMSAGVDLYQGLRVHGYWTVQEAK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+ P++++++ G+   RYFL+RE+  G D  + ++ L  R+N+DLAN +GNL 
Sbjct: 296 MSKSLGNVVQPMDMVDKYGLAPFRYFLLREMQFGLDASFSEEALVNRLNSDLANDLGNLC 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+++M  K + G++P     ++ D+ ++      L E      +    + L+ + + + 
Sbjct: 356 SRTLAMTNKYFQGLVPEKSGLSQEDQEVVDAGLTALDEYVRLFGDFQFSKGLSVLWAFIG 415

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++Y DA  PW L K    +R   V+YV +E +R++A+ L   +P  + ++   L    
Sbjct: 416 RLNKYVDASAPWVLYKEGQTERLQNVMYVLLEGLRKIALHLWPVMPSSSEELLSQLGTGF 475

Query: 482 ENRCFQSLDQ-----RLKPGFMLHKTFDPIFPR 509
           +        +      LKPG  + K  + +FPR
Sbjct: 476 DLHKVDLEQEAGHWSGLKPGVRVAKKSN-LFPR 507


>gi|170079299|ref|YP_001735937.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169886968|gb|ACB00682.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 530

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 204/525 (38%), Positives = 285/525 (54%), Gaps = 17/525 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    +  ++T + Y N  PHIG AY  ++AD +ARFHRL G DVLF TGTDEHGQKI +
Sbjct: 1   MTSPVRFALTTPLYYVNDVPHIGSAYTTMVADAIARFHRLKGDDVLFITGTDEHGQKIQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  GV  +V  D+   +F+D+    +I YD F RTT   H       ++++ D GDIY
Sbjct: 61  TAQEKGVDPQVHCDEIIGSFKDLWQHYNIQYDRFSRTTAPNHAKIVAEFFQRVWDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                GWY +  E +  + ++    D       +   +W +EE YFFRLS YQ +L + Y
Sbjct: 121 LAQQQGWYCVACEEFKEEKDLI--KDHHCAIHTNKQAEWRDEENYFFRLSKYQAQLEALY 178

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P+FI P  RRNEVI+FVK GL+D S+SR   DWG  +P D  + +YVW DAL  Y+T
Sbjct: 179 SDNPDFIQPASRRNEVINFVKQGLQDFSISRVNLDWGFPVPTDENHTIYVWFDALLGYVT 238

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                      +    K+WP +LH+IGKDILRFHA+YWPA L+SANLPLP KVF HGF+ 
Sbjct: 239 ALLEDGEAATLENALKKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPDKVFGHGFLT 298

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN IDPI ++ + G DALRY+ ++E+  GKDG +++      VNADLAN 
Sbjct: 299 KNGLKMGKSLGNTIDPIALVNQYGADALRYYFLKEVELGKDGDFNETRFVNVVNADLAND 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R++ M+ K     IP     T   D  + ++   +         N     A  Q
Sbjct: 359 LGNLLNRTLGMLKKYCKSEIPNLDLGTIPVDHPLKALGETLGDRTCAAYDNLNFTAACQQ 418

Query: 417 VISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           V++L+   ++Y D + PW L K     +   +L   +E +R  A LL   +P L+N+I+ 
Sbjct: 419 VLALIQASNKYIDDRAPWALFKAGEQAQVEEILLTILESVRLAAYLLSPVIPNLSNQIYR 478

Query: 476 ILFVADENRCFQSL----------DQRLKPGFMLHKTFDPIFPRF 510
            L    +    + L             L           PIF R 
Sbjct: 479 QLGFPGDFNRPEDLVNLAPFASHSRWGLPWSERTLTKAQPIFARL 523


>gi|221484363|gb|EEE22659.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 976

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 202/510 (39%), Positives = 297/510 (58%), Gaps = 12/510 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++REK YI+TAI Y N  PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA  
Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F+ M   L +S D +IRTT+  H   C+ LWK++ ++GDIY 
Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWY+ R+E + ++ E               P+Q MEE  YFFR+S YQ +L+ +  
Sbjct: 393 DTYVGWYNEREETFVSESE--ARLTDYKDPTTGKPLQKMEEPSYFFRMSKYQARLVKHIN 450

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTNY + 
Sbjct: 451 ENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTNYYSA 510

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
                  DG++A FWPAD+H+IGKDI+ FH + WP  L++A+LPLPK VF HGF+    G
Sbjct: 511 ---TVMNDGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVTAADG 567

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP ++++    D+ R++LVRE   G D  +D+D L    NA+LA+ +GN
Sbjct: 568 EKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELADTLGN 627

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+ S+ +K  +G +P P +     ++  S     + E+   +    +  AL   ++ 
Sbjct: 628 LVHRATSLCVKFCEGKVP-PVSLPAEGKAPFS-IPDTVGEMERLVGQFGLREALEVAMNA 685

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             E +++     PW L  T+      V+   +E +  L  LL+ F+P  A+ IF  L  A
Sbjct: 686 CREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFKKLNTA 743

Query: 481 DENRC-FQSLDQRLKPGFMLHKTFDPIFPR 509
            +           L PG  + +  D +F +
Sbjct: 744 PKTLADLSPWFDNLVPGTPV-EVGDILFAK 772


>gi|237838135|ref|XP_002368365.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211966029|gb|EEB01225.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 976

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 202/510 (39%), Positives = 297/510 (58%), Gaps = 12/510 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++REK YI+TAI Y N  PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA  
Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F+ M   L +S D +IRTT+  H   C+ LWK++ ++GDIY 
Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWY+ R+E + ++ E               P+Q MEE  YFFR+S YQ +L+ +  
Sbjct: 393 DTYVGWYNEREETFVSESE--ARLTDYKDPTTGKPLQKMEEPSYFFRMSKYQARLVKHIN 450

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTNY + 
Sbjct: 451 ENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTNYYSA 510

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
                  DG++A FWPAD+H+IGKDI+ FH + WP  L++A+LPLPK VF HGF+    G
Sbjct: 511 ---TVMNDGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVTAADG 567

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP ++++    D+ R++LVRE   G D  +D+D L    NA+LA+ +GN
Sbjct: 568 EKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELADTLGN 627

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+ S+ +K  +G +P P +     ++  S     + E+   +    +  AL   ++ 
Sbjct: 628 LVHRATSLCVKFCEGKVP-PVSLPAEGKAPFS-IPDTVGEMERLVGQFGLREALEVAMNA 685

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             E +++     PW L  T+      V+   +E +  L  LL+ F+P  A+ IF  L  A
Sbjct: 686 CREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFKKLNTA 743

Query: 481 DENRC-FQSLDQRLKPGFMLHKTFDPIFPR 509
            +           L PG  + +  D +F +
Sbjct: 744 PKTLADLSPWFDNLVPGTPV-EVGDILFAK 772


>gi|251771721|gb|EES52296.1| methionyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 673

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 207/518 (39%), Positives = 296/518 (57%), Gaps = 17/518 (3%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +R    Y++T I Y N  PHIGHAY  + ADVLAR HRL G  V F TGTDEHGQK+ 
Sbjct: 1   MSDRSPWFYLTTPIYYVNDIPHIGHAYTTVAADVLARTHRLLGEPVFFLTGTDEHGQKVW 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           ++A+  G+  +V+VD+    FR++ + L IS DDF+RTT+ RH +  R     + +KGDI
Sbjct: 61  QSAERHGLPPQVYVDRILPRFRELWEKLVISNDDFVRTTQPRHVEGVREALSLLLEKGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+G Y GWY L DE ++ D +V +G           PV+ + E  YFFR+  YQD L+S+
Sbjct: 121 YEGAYEGWYCLPDERFWTDKDVEEG----LCPECRRPVERISETNYFFRMGRYQDWLVSH 176

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
           YE+HPE + P  R NEV+ F++  L DL +SR      WGI +P  P Y+ YVW DAL N
Sbjct: 177 YEAHPEAVRPESRYNEVMGFLRKPLGDLCISRPKSRVPWGIPLPFAPDYVTYVWFDALLN 236

Query: 238 YLTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           Y+T    L        ++ WP   H++GKDIL  HA+YWP  L +  LP P+ +F+HG+ 
Sbjct: 237 YITVPRSLGPTPEEGLSRLWP-GTHIVGKDILTTHAVYWPILLRALELPPPRLIFAHGWW 295

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKS GNV+DP+ ++E  G DA RYFL+RE   G+D  + ++ L  R+N DLAN
Sbjct: 296 TVDGQKMSKSRGNVVDPVGLVETFGPDATRYFLLREGQFGQDVDFSREALINRINRDLAN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR  +M +K +      P    E    + +  +R+L E+         HRALA 
Sbjct: 356 DLGNLLSRVAAMAVKFF-PEGGIPRPAGEGMREVETFAARLLPEVVSRTVALEFHRALAT 414

Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   V  ++R  DA+ PW L +        + VLY  +E +R +A+ L  ++P  A++IF
Sbjct: 415 LWEFVGFLNRTVDARAPWVLARDPSRSQELAEVLYDLLEGLRLVAVHLTPYLPGTADRIF 474

Query: 475 DILFVADENRCFQSLDQRLKPGFML---HKTFDPIFPR 509
           +IL          SL      G +     +   P+FPR
Sbjct: 475 EILDCPGTGTA--SLTAHGTFGAVASYTPRPGAPLFPR 510


>gi|75908935|ref|YP_323231.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702660|gb|ABA22336.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 530

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 197/521 (37%), Positives = 302/521 (57%), Gaps = 14/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  + AD +ARF +L G DVL  TGTDEHGQKI ++
Sbjct: 6   KSEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F D+   +F  +  +L+I YD F RTT  RH       + ++   GDIY+
Sbjct: 66  AESLGKAPQEFCDEIVPSFMSLWQLLNIQYDRFSRTTAVRHKAIVDEFFARVWQAGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G   +     +  V+W +E+ YFFRLS YQ +L  +Y+
Sbjct: 126 GQQKGWYCVSCEEFKEERELLEGN--RCPIHVNKEVEWRDEQNYFFRLSKYQTQLEEFYK 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP+FI P  RRNEV++FV  GL+D S+SR   DWG  +P D ++ +YVW DAL  Y+T 
Sbjct: 184 SHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPTDSKHTLYVWFDALLAYVTA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
                +    +   AK+WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+  
Sbjct: 244 LLDPQDEPTLENALAKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN IDP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTIDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K   +  +        ++ ++ ++   +  ++++  +    ++A   V
Sbjct: 364 GNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGVDLGAKVKQAYEVLAFNQACGVV 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +SLV   +++ D Q PW L K        TVLY  +E +R  A LL   +P +++ I+  
Sbjct: 424 LSLVQASNKFIDDQAPWSLYKQGRQQEVETVLYTVLESVRLAAYLLSPVIPNISSSIYQQ 483

Query: 477 LFVA---DENRCFQSLDQRLKPGFMLHK----TFDPIFPRF 510
           L      +E           + G + +K       PIF R 
Sbjct: 484 LGFGINFNEQTDITPFAIHAQWGLLSNKQQLGQPQPIFKRI 524


>gi|261332101|emb|CBH15094.1| methionyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 773

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 215/527 (40%), Positives = 313/527 (59%), Gaps = 22/527 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +  ++++ I Y NA PHIGH Y  +I DV+ R+HR+ G  V   TGTDEHGQK+A+A
Sbjct: 237 KVEKVFFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHGQKVAEA 296

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   V+   F    +  F+   + +D S D FIRTT ++H    + LW K+  KGDIY 
Sbjct: 297 AKQKQVSPYDFTAAVAGEFKKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYL 356

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     +  G D      +      + V W+ EE Y FRLSA++++L
Sbjct: 357 GRYEGWYSISDESFLTPQNITDGVDKDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERL 416

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L +Y ++P  I+P  RR EVI  V+ GL DLS+SRK     +W I +P +P + +YVW+D
Sbjct: 417 LEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRKKETLHNWAIPVPGNPDHCVYVWLD 476

Query: 234 ALTNYLTTTGYLDN---------PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           ALTNYLT +    +          D ++ + +PAD+HVIGKDIL+FHAIYWPAFLLSA L
Sbjct: 477 ALTNYLTGSRLRVDESGKEVSLVDDFNELERFPADVHVIGKDILKFHAIYWPAFLLSAGL 536

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           PLPKK+ +HG+     +KISKSLGNV DP+E  EE G DAL+YFL+RE     DG Y   
Sbjct: 537 PLPKKIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDK 596

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +  R+N +LA+ +GNLV R  S  + + +G  P+P A+TE DES++ +   +       
Sbjct: 597 NMIARLNGELADTLGNLVMRCTSAKI-NVNGEWPSPAAYTEEDESLIQLIKDLPGTADHY 655

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                I +A+  V  ++  ++ Y     PW+L KT+P+R  TVLY+T+E +R   +LL  
Sbjct: 656 YLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTDPERLRTVLYITLEGVRVTTLLLSP 715

Query: 465 FVPKLANKIFDILFVADENR-CFQSLD-QRLKPGFMLHKT--FDPIF 507
            +P+ +  IFD+L V + +R   ++ +   + PG  L      + +F
Sbjct: 716 ILPRKSVVIFDMLGVPEVHRKGIENFEFGAVPPGTRLGPAVEGEVLF 762


>gi|37522592|ref|NP_925969.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|35213593|dbj|BAC90964.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 516

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 198/513 (38%), Positives = 292/513 (56%), Gaps = 11/513 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y NA PHIG AY  + AD +AR+HRL G  V F TGTDE+G KI + A    
Sbjct: 5   FALTTPLFYVNALPHIGSAYPTLAADAVARYHRLRGRSVRFVTGTDEYGLKIERQAAERH 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +   ++ +  F  +   L I YD FIRTT+ RH    R  +++    GDIYKG Y+G
Sbjct: 65  LTPREHCNEIAAGFEKLWRALSIDYDRFIRTTDPRHAAIVREFFERCWQAGDIYKGRYTG 124

Query: 127 WYSLRDEAY-YNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            Y +  E +    DE Y   +G         P++  +EE Y F LS YQ KL  Y++ HP
Sbjct: 125 LYCIDCEEFKKKPDEDYFIENGEPRCKIHLKPLREQDEENYIFALSRYQQKLEQYFDEHP 184

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EF+ P  R +EV +F+  GL+D S+SR    WG+ IP D    +YVW +AL  Y+T    
Sbjct: 185 EFVQPDFRAHEVRNFIAGGLEDFSISRANVSWGLPIPVDSSQTIYVWFNALLGYVTALLE 244

Query: 245 LDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            ++    +   A++WP DLH++GKDILRFHA+YWPA L+SA LPLP  +F HGF+   G 
Sbjct: 245 PEDEPTLENALARWWPIDLHIVGKDILRFHAVYWPAMLMSAGLPLPGMIFGHGFLTRDGR 304

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ K+LGNVIDP  ++E+ G DA+RY+ ++ I  G+D  +++   ++ +NADLAN +GNL
Sbjct: 305 KMGKALGNVIDPGVLVEQYGSDAVRYYFLKAIEFGRDNDFNETRFREILNADLANDLGNL 364

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R+ +M++K   G+IP+  A   +D ++    + + Q   E+ +      A    ++LV
Sbjct: 365 LNRTGNMVVKYCGGVIPSV-AIDPTD-ALRDKATGLAQVCAEHWEALRFSEASGLALALV 422

Query: 422 SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV- 479
              +RY DA+ PW L KK    +   VLY  +E +R  A+LL   +P LA +I+  L   
Sbjct: 423 RAGNRYLDARAPWSLYKKGEQVQVEQVLYAVLESVRIAAVLLSPLIPGLAAEIYRQLGFS 482

Query: 480 --ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             A E+R +        PG        P+FPR 
Sbjct: 483 VQAWEDRSWDDALWGGLPGGQPLCLGSPLFPRL 515


>gi|300867846|ref|ZP_07112488.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300334177|emb|CBN57664.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 535

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 191/524 (36%), Positives = 292/524 (55%), Gaps = 19/524 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   ++T + Y N  PH+G AY  + AD  ARF RL G  VL  TGTDEHGQKI + A
Sbjct: 7   TKDTFALTTPLYYVNDLPHVGSAYTTMAADAAARFERLRGKSVLLITGTDEHGQKIQRTA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ G + +   D  +  F  + + L+I Y+ F RTT  RH    +  ++++ + GDIY  
Sbjct: 67  ESVGRSPQAHCDLIAAGFESLWEQLNIQYNRFSRTTAPRHQFIVKEFFQRVWEAGDIYLS 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              GWY +  E +  + ++  G   +        V+W +EE YFFRLS YQ +L   YE 
Sbjct: 127 QQQGWYCVSCEEFKEERDLLPG--KRCPIHTSKEVEWRDEENYFFRLSRYQAQLQELYEQ 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            P+FI P  RRNEV+ FV +GL+D S+SR   DWG+ +P D ++ +YVW DAL  Y+T  
Sbjct: 185 RPDFIQPKSRRNEVLKFVSTGLQDFSISRINLDWGLPVPADDRHTIYVWFDALLGYITAL 244

Query: 243 GYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
              D+    +   +K+WP DLH+IGKDILRFHA+YWPA L+SANLP+P ++F HGF+   
Sbjct: 245 LDPDSEPTLENALSKWWPIDLHLIGKDILRFHAVYWPAMLMSANLPMPGRIFGHGFLTKD 304

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ K+ GN+IDP+ ++ + G DA+RY+ ++EI  G+DG +++      +NADLAN +G
Sbjct: 305 GRKMGKTDGNIIDPVALVNQYGSDAVRYYFLKEIEFGEDGDFNEARFIDTLNADLANDLG 364

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NLV+R++SM  K   G+IP   A   + D  +  +   +     +  +N    +A   ++
Sbjct: 365 NLVNRTLSMAHKYCGGLIPNVNAEDIAPDNPLKEIGLTLSDRTAQAYENLAFSQACEAIL 424

Query: 419 SLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +LV   +++ D   PW L K    +    VLY  +E +R  A LL   +P +++ I+  L
Sbjct: 425 ALVQAGNKFIDFSAPWSLYKQGKLEAVEKVLYPVLESVRLAAYLLSPIIPNISSAIYQQL 484

Query: 478 FVADE-----------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             A +               Q++   L     L +   P+F R 
Sbjct: 485 GFAIDFNDQVAINNSATFATQAIWGALPANQALRQP-QPVFKRI 527


>gi|158523214|ref|YP_001531084.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158512040|gb|ABW69007.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 640

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 197/514 (38%), Positives = 279/514 (54%), Gaps = 18/514 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  I+ADV ARFH + G  V F TGTDEHG KI KAA   G
Sbjct: 5   FYITTPIYYVNAKPHLGHAYTTIMADVAARFHAMAGKKVFFLTGTDEHGDKIMKAAAARG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ K + D  S  FRD+   LDI Y  FIRTT++ H      +   I + GDIY   Y G
Sbjct: 65  VSPKAYADTISALFRDLWTELDIGYSHFIRTTDENHKQVVSRVLAAIYEAGDIYFSEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y    E +Y + E+  G           P + ++E  YFF++S YQ  L+ +   +P+F
Sbjct: 125 LYCFGCERFYTERELVNGK----CPDHDTPPERIQEANYFFKMSKYQQWLIDHITDNPDF 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   R E++SF+K  L DL +SR T   DWGI +P D +Y+ YVW DAL NY++  GY
Sbjct: 181 IRPEGYRTEILSFLKEPLDDLCISRPTSRLDWGIPLPFDDRYVTYVWFDALLNYVSALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+       FWPA  H+  KDI++ H IYWP  L +A +PL   +  HGF   +  K+S
Sbjct: 241 PDDDRY--MTFWPAVQHLTAKDIIKPHGIYWPIMLKAAGIPLYNHLNVHGFWQIESCKMS 298

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV++P+++    G DA RYFL RE++ G D  + ++ L +R+NADLAN +GNL SR
Sbjct: 299 KSLGNVVNPLDMKNTYGTDAFRYFLCREMSFGLDAGFSEEALVQRINADLANDLGNLFSR 358

Query: 365 SVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            ++M  K +   +P          D  I ++    +      M    ++RALA V  L+S
Sbjct: 359 VLAMTAKYFKNRVPAADDANLPPCDIDIGALARTTVAAYEAQMATFHMNRALAAVWDLIS 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++R+ D   PW L K     D  + V+Y  +E +R +A L+   +P     +   L + 
Sbjct: 419 AMNRFIDYSAPWTLAKDPAKADALAAVIYTLLEGLRIVAGLVYPVMPGTGKTMMAHLGLD 478

Query: 481 DENRCFQSLD-----QRLKPGFMLHKTFDPIFPR 509
             +     L+      RL P  ++ K    +FPR
Sbjct: 479 GPDSELFRLEDFKQWGRLVPDTVVAKPAS-LFPR 511


>gi|13605910|gb|AAK32940.1|AF367354_1 AT3g55400/T22E16_60 [Arabidopsis thaliana]
 gi|22137164|gb|AAM91427.1| AT3g55400/T22E16_60 [Arabidopsis thaliana]
          Length = 616

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 189/519 (36%), Positives = 285/519 (54%), Gaps = 12/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA 
Sbjct: 65  VDEGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIAT 124

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY
Sbjct: 125 SAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  Y G Y +  E Y ++  +    +         P    +E+ YFF LS YQ  L    
Sbjct: 185 RADYEGLYCVNCEEYKDEKGLL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDIL 241

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y++
Sbjct: 242 AQNPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYIS 301

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                +     +   +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ 
Sbjct: 302 ALTEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLT 361

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN 
Sbjct: 362 KDGMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANT 421

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V
Sbjct: 422 IGNLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAV 481

Query: 418 ISLVSEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +  + Y D + PW L K      + A+  L + +EV+R +A+ L    P L+ +I+
Sbjct: 482 LEIGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRIY 541

Query: 475 DILFVADE---NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             L   ++   +  +         G  + +   P+F R 
Sbjct: 542 SQLGYTEDQFNSITWSDTKWGGLKGGQVMEQASPVFARI 580


>gi|221505659|gb|EEE31304.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 976

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 202/510 (39%), Positives = 297/510 (58%), Gaps = 12/510 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++REK YI+TAI Y N  PH+GH YE++ +D LARFHR+ G DV F TGTDEHGQKIA  
Sbjct: 273 RQREKFYITTAINYTNGPPHMGHVYEIVTSDALARFHRIAGRDVFFLTGTDEHGQKIANT 332

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G T +   D  +  F+ M   L +S D +IRTT+  H   C+ LWK++ ++GDIY 
Sbjct: 333 AERLGKTPQEICDFYAAGFQAMNAKLCVSNDQYIRTTQAAHKAVCQWLWKRVQERGDIYL 392

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWY+ R+E + ++ E               P+Q MEE  YFFR+S YQ +L+ +  
Sbjct: 393 DTYIGWYNEREETFVSESE--ARLTDYKDPTTGKPLQKMEEPSYFFRMSKYQARLVKHIN 450

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +P+FI P ERR  ++  ++  L DLS SR TF WG+ +P D +++MYVW DALTNY + 
Sbjct: 451 ENPDFIRPEERRKNILKRLEEPLLDLSCSRTTFSWGVPVPGDEKHVMYVWFDALTNYYSA 510

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKG 300
                  DG++A FWPAD+H+IGKDI+ FH + WP  L++A+LPLPK VF HGF+    G
Sbjct: 511 ---TVMNDGARASFWPADVHIIGKDIVWFHTVIWPCMLMAADLPLPKCVFGHGFVTAADG 567

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGNV+DP ++++    D+ R++LVRE   G D  +D+D L    NA+LA+ +GN
Sbjct: 568 EKMSKSLGNVVDPNDILQAHDADSFRFYLVRETKFGSDLRFDEDALTATTNAELADTLGN 627

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+ S+ +K  +G +P P +     ++  S     + E+   +    +  AL   ++ 
Sbjct: 628 LVHRATSLCVKFCEGKVP-PVSLPAEGKAPFS-IPDTVGEMERLVGQFGLREALEVAMNA 685

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             E +++     PW L  T+      V+   +E +  L  LL+ F+P  A+ IF  L  A
Sbjct: 686 CREANKFLTDWAPWSL--TDSTEKQRVVRGALEAVFVLGHLLEPFIPVTADHIFKKLNTA 743

Query: 481 DENRC-FQSLDQRLKPGFMLHKTFDPIFPR 509
            +           L PG  + +  D +F +
Sbjct: 744 PKTLADLSPWFDNLVPGTPV-EVGDILFAK 772


>gi|320450854|ref|YP_004202950.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151023|gb|ADW22401.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 627

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 201/506 (39%), Positives = 301/506 (59%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYITTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYQTFFLTGTDEHGETVYRAAQRAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + FVD+ S+ FR   ++L I+YDDFIRTTE+RH    + + +++ + GDIY G Y G
Sbjct: 65  EEPQAFVDRVSQRFRKAWELLGIAYDDFIRTTEERHKRVVQRVLQRVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+     G        PV+   E  YFFR+  Y++ L+ Y ++HP+ 
Sbjct: 125 LYCVSCERFYTEKELQ----GDLCPIHGRPVERRREGNYFFRMEKYREWLIDYLQTHPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV+S +   + DLS+SR      WGI +P D  ++ YVW DAL NY++  GY
Sbjct: 181 IRPEGYRNEVLSMLSEPIGDLSISRPKARVPWGIPLPWDEVHVTYVWFDALLNYVSALGY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
            D+P    A FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 PDDPR--FATFWPQAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  + E+ G DA+RY+L+REI  G+D    ++ L+ R  ADLA+ +GNL+ 
Sbjct: 299 SKTLGNVVDPFLLTEKYGRDAVRYYLLREIPYGQDTPVSEEALRARYEADLADDLGNLLQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  DG IP P    E     L   +R+   +R  +++   H AL + ++ V  
Sbjct: 359 RTRAMLFRFADGRIPEPVPGEE-----LEEGTRLAGRLRGLVRDLRFHVALEETMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + ++PWEL K +P  A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKRPWELFKEDPREAKAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLREEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     L +    +FP+
Sbjct: 474 RLEEAERWGLAGPLPLPQEAGVLFPK 499


>gi|17227729|ref|NP_484277.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|25009375|sp|Q8Z068|SYM_ANASP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|17135211|dbj|BAB77757.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 530

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 196/521 (37%), Positives = 305/521 (58%), Gaps = 14/521 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  + AD +ARF +L G DVL  TGTDEHGQKI ++
Sbjct: 6   KAEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F D+   +F  +  +L+I YD F RTT  RH       + ++ + GDIY+
Sbjct: 66  AESLGKAPQEFCDEIVPSFMSLWRLLNIQYDRFSRTTAVRHKAIVDEFFARVWEAGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+ +G   +     +  V+W +E+ YFFRLS YQ +L  +Y+
Sbjct: 126 GQQKGWYCVSCEEFKEERELLEGN--RCPIHVNKEVEWRDEQNYFFRLSKYQTQLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           SHP+FI P  RRNEV++FV  GL+D S+SR   DWG  +P+DP++ +YVW DAL  Y+T 
Sbjct: 184 SHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPNDPKHTLYVWFDALLAYVTA 243

Query: 242 TGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               ++    +    K+WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+  
Sbjct: 244 LLDPEDEPTLENALGKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DP+ ++++ G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTVDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFIHVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K   +  +        ++ ++ ++   +  ++++  +    ++A   V
Sbjct: 364 GNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGVDLGAKVKQAYEVLAFNQACGVV 423

Query: 418 ISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +SLV   +++ D Q PW L K        TVLY  +E +R  A LL   +P +++ I+  
Sbjct: 424 LSLVQASNKFIDDQAPWSLYKQERQQEVETVLYTVLESVRLAAYLLSPVIPNISSNIYQQ 483

Query: 477 LFVA---DENRCFQSLDQRLKPGFMLHK----TFDPIFPRF 510
           L      +E           + G + +K       PIF R 
Sbjct: 484 LGFGINFNEQTDITPFAIHAQWGLLSNKQQLGQPQPIFKRI 524


>gi|157868928|ref|XP_001683016.1| methionyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68223899|emb|CAJ04288.1| putative methionyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 747

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 212/528 (40%), Positives = 304/528 (57%), Gaps = 21/528 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F+     ++   + FIRTT   H    + +WKK++ KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYL--------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY         T      + D      WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+     +KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L K +  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENR--CFQSLDQRLKPGFMLH--KTFDPIFPR 509
           +P+ A +I D L V +  R      L   +KPG  +        +F +
Sbjct: 685 MPQKAKEIMDALGVPEAARVGMENYLFGIVKPGTKIAGLAEGQVVFQK 732


>gi|16331573|ref|NP_442301.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501033|sp|Q55729|SYM_SYNY3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1001640|dbj|BAA10371.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 532

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 196/522 (37%), Positives = 286/522 (54%), Gaps = 18/522 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++T + Y N  PH+G AY  ++AD LARF RL G DVL  TGTDEHGQKI + A+ 
Sbjct: 7   PTFSVTTPLYYVNDVPHLGSAYTTVVADTLARFKRLQGYDVLMITGTDEHGQKIQRTAEA 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  +   D+    F+++   L+I YD F RTT+ RH    +  ++++ DKGDIY    
Sbjct: 67  QELDPQTHCDRTVVKFKELWRSLNILYDRFSRTTDPRHLAIVKDFFQRVWDKGDIYLAQQ 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E +    ++    D       +   +W +EE YFFRLS YQ  L   Y   P
Sbjct: 127 QGWYCVACEEFKEKRDLL--EDNHCPLHPNRKAEWRDEENYFFRLSRYQHPLEELYAQRP 184

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---T 241
           EFI P  RRNEV++FV  GL+D S+SR   DWG  +P+DP + +YVW DAL  Y+T    
Sbjct: 185 EFIQPSSRRNEVLNFVAQGLQDFSISRVNLDWGFPLPNDPNHTIYVWFDALLGYVTALLD 244

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
                N   +  K+WP +LH+IGKDILRFHA+YWPA L+SA L +P +VF HGF+   G+
Sbjct: 245 EDEEPNLTNALVKWWPINLHLIGKDILRFHAVYWPAMLMSAELAIPAQVFGHGFLTKDGQ 304

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN +DP+++I   G DA RY+ ++EI  GKDG +++      +NADLAN +GNL
Sbjct: 305 KMGKSLGNTVDPLDLINRYGEDAFRYYFLKEIEFGKDGDFNEQRFVNVLNADLANDLGNL 364

Query: 362 VSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R++ M+ K   G  P   A   + D  + ++ S + +E+    +      A   + +L
Sbjct: 365 LNRTLGMVKKYCQGQGPQVMATDLAPDNPLKALGSHLGEEVSSAYERLSFTDACEAIFTL 424

Query: 421 VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V   ++Y D   PW+L K    +    VLY  +E IR  A LL   VP+L+ KI+  L  
Sbjct: 425 VRAGNKYIDDMAPWKLFKQGSQKEVEDVLYSVLESIRLSAYLLSPIVPRLSTKIYQQLGF 484

Query: 480 ADENRCFQSLDQRLKP-----------GFMLHKTFDPIFPRF 510
             +   ++S  ++ +                     PIF + 
Sbjct: 485 TWDFDQWRSPLEQAEEFNRHQSWGQLGANQNLPPAQPIFTKL 526


>gi|94987625|ref|YP_595558.1| methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731874|emb|CAJ55237.1| Methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 651

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 303/521 (58%), Gaps = 24/521 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YIST I Y NA+PH+GHAY  I+ADVL RF+ + G    F TGTDEHG+KI +AA+ A
Sbjct: 4   TYYISTPIYYVNARPHLGHAYSTIVADVLQRFYSILGEKTFFLTGTDEHGEKIIQAAEAA 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G +T+ FVD  SR F+++   L+I+YD FIRTT+ +H +  +   + I D GDIY G + 
Sbjct: 64  GYSTQEFVDSISRQFQNLWPQLNITYDAFIRTTDLQHKEAVQKFLQHIYDAGDIYFGEFG 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y L  E +Y + E+    DG     +  P +++EE+ YFF++S Y   L+ Y + HP 
Sbjct: 124 GYYCLGCERFYTEKELE---DGFCPQHKTKP-EFIEEQNYFFKMSKYLSWLIEYLQQHPN 179

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            I P   +NEV+S ++SG L+DL +SR      WGI++P D  Y+ YVW DAL +Y++  
Sbjct: 180 LIRPERYKNEVLSLLESGALEDLCISRPKTRLPWGIELPFDTNYVCYVWFDALISYISAL 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +          FWP + H+I KDIL+ HA++WP  L SA LP+ K +  HG+ L++  K
Sbjct: 240 NWPTGEYYK--TFWPGE-HLIAKDILKPHAVFWPTMLKSAGLPMYKHLNVHGYWLNRDTK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSL N IDPI +I++ G+DA RYFL+RE+  G D  + ++ LK R+N+DLAN +GNL 
Sbjct: 297 MSKSLNNAIDPITLIQQYGLDAFRYFLIREMNFGSDANFSEESLKHRINSDLANDLGNLF 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R +SM  K +  ++P    +TE D  +  +         + M+N  + +A+  +  L+ 
Sbjct: 357 NRVLSMSTKYFKSLLPEAKEYTEPDMQLRQLTENAQYNYIQLMKNMRLSQAVEALWELIR 416

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++Y D Q PW+L K    DR  TV+ +T+E +R++AI L   +P++   +   L ++ 
Sbjct: 417 ALNKYIDTQAPWKLFKEGQTDRLKTVIRLTLECMRKVAISLWPIMPEITITMLKQLGIST 476

Query: 482 ENR------------CFQSLDQRLKPGFMLHKTFDPIFPRF 510
                                ++L  G ML      +FPR 
Sbjct: 477 SKSKKYGNIPTTCINNDIHAWEQLTTGTML-APTSNLFPRI 516


>gi|255527796|ref|ZP_05394647.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508509|gb|EET84898.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 594

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 185/461 (40%), Positives = 281/461 (60%), Gaps = 12/461 (2%)

Query: 55  GQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
            +K+ + A+  GVT K +VD+     +D+ +++++SYD FIRTT+  H    + ++KK+ 
Sbjct: 4   DKKLQRLAEAKGVTPKAYVDEIVAGIKDLWEIMNVSYDKFIRTTDDYHVKAVQDMFKKLY 63

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           D+GDIYKG Y GWY    E+++ + +   G           PV+  +EE YFF++S Y  
Sbjct: 64  DQGDIYKGSYEGWYCTPCESFWTETQAVDGK----CPDCGRPVEKAKEEAYFFKMSKYAP 119

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           KL+ Y ESHPEFI P  R+NE+I+   K GL+DL +SR +FDWGI +  D ++++YVW+D
Sbjct: 120 KLIEYIESHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWVD 179

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY  +      K+WPAD+H++GKDILRFH IYWP  L++  LPLPK+VF H
Sbjct: 180 ALSNYITALGYGSSNSDLYNKYWPADVHLVGKDILRFHTIYWPIMLMALGLPLPKQVFGH 239

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L  G K+SKS GNV+DP+ ++   G D +RY+L+REI  G DG ++ +   K++N+D
Sbjct: 240 GWLLVDGGKMSKSKGNVVDPVLLVNHFGADPVRYYLLREIPFGADGLFNNEIFIKKINSD 299

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           LAN +GNL+SR+ +M+ K + G IP P A    D+ ++ V     +   + + N  I  A
Sbjct: 300 LANDLGNLLSRTCAMVEKYFGGTIPAPTAKEAIDDELIKVALNTPKAAEQCIDNLRIPEA 359

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  L+   ++Y D   PW L K     +R  TVLY  +E +R +++ L AF+P  + 
Sbjct: 360 LDCIWELIGRANKYIDETTPWILAKDESKKERLGTVLYNLLESLRIVSVCLSAFLPDTSE 419

Query: 472 KIFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           KI   L    E   + SL      K G  ++K  + +FPR 
Sbjct: 420 KINKQLN--AEVITWDSLTSFDGTKAGSKVNK-GELLFPRI 457


>gi|221195624|ref|ZP_03568678.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184390|gb|EEE16783.1| methionyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 537

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 201/532 (37%), Positives = 310/532 (58%), Gaps = 24/532 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++  +I+T I Y NA+PH+G AY  ++ DV ARF R  G DVLF TG DEHG+K+A+A
Sbjct: 3   EGKQPYFITTPIYYVNAKPHLGTAYCSLLCDVQARFRRAAGYDVLFLTGMDEHGEKVAQA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  + + D  +  F+D+ D L++SYDDFIRTTE R +   + LW+++ D G IYK
Sbjct: 63  AAEHGMEPQAWCDSQAPYFKDLWDELEVSYDDFIRTTEPRQYRAVQYLWERMRDSGYIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWY + +E Y+ + +V K  +             H P++ + EE +FF+LS +QD+
Sbjct: 123 GSYDGWYCVHEETYFTETQVEKADEEQGTKGQHLCPDCHRPLERVTEESWFFKLSEFQDR 182

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  YE HPEF+ P  R NEV SFV+SGL+D+S+SR +FDWGI +P D  ++ YVW DAL
Sbjct: 183 LLKLYEEHPEFVEPDFRLNEVRSFVESGLQDVSVSRTSFDWGIPVPFDEGHVTYVWFDAL 242

Query: 236 TNYLTTTGYLDNPDG---SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            NY T  GY D+       +A+FWPA +HV+GKDI+RFH + WPA L++    +P++VF+
Sbjct: 243 LNYYTAVGYGDDSPEAAALRARFWPAQMHVVGKDIIRFHCVIWPAMLMALGESVPERVFA 302

Query: 293 HGFILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           HGF+  +       EK+SKS GN I P +V++ +GV+  RY+ + ++  G+D     + +
Sbjct: 303 HGFLNVRNSETGAIEKMSKSRGNAIAPEDVVKLLGVEGYRYYFMTDVVPGEDSGISFERM 362

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIRENM 405
           ++  NADLAN  GNLVSRS++M  K + G  P       SD++ + ++   +       M
Sbjct: 363 EQVYNADLANSWGNLVSRSLNMSDKYFAGCTPHVDGALISDKNPLKALADGIYGRYATCM 422

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQLAILL 462
            +     A   V+ LV   + Y +   PW + K +P R    + ++Y  +E IR  A LL
Sbjct: 423 DHMNYVGAKDVVMELVHAANHYIEESAPWNVAK-DPARVSELAEIIYSLLEAIRISAHLL 481

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLD----QRLKPGFMLHKTFDPIFPRF 510
             F+P  + ++   + + ++     +L+         G +     + +FPR 
Sbjct: 482 MPFMPTTSAEVLSRMSLGEDEITSCALEKDCTWGKLSGGLAVTKGEALFPRL 533


>gi|257460335|ref|ZP_05625436.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441666|gb|EEV16808.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 665

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 205/509 (40%), Positives = 306/509 (60%), Gaps = 11/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI T I Y N  PHIGHAY  IIAD +ARF+RL G +V F TGTDEHGQKI +AA   
Sbjct: 2   KKYIMTPIYYVNDVPHIGHAYTTIIADTMARFYRLQGHEVFFKTGTDEHGQKIEEAAAKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + K + D  S  F+D+ D  DISYD F RTT+  H    + +++K+ +KGDIYKG Y 
Sbjct: 62  AQSPKQYADGVSAKFKDLWDEFDISYDMFSRTTDAAHEAAVQNVFRKMYEKGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++    DG+Y        + ++EE YFFRLSAY ++LL +Y    +
Sbjct: 122 GNYCVSCESFFPSAQL---IDGEYCPDCGKKTKILKEESYFFRLSAYAERLLKWY-EDEK 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP+ ++NEVISFVKSGLKDLS++R  FDWG+KIP   +DP++++YVW+DAL +YL++ 
Sbjct: 178 CILPLGKKNEVISFVKSGLKDLSITRTGFDWGVKIPPELNDPKHVIYVWLDALMDYLSSL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G+     G + ++W   LH++GKDILRFHA+YWPAFL+S  L +P+ + +HG+    G+K
Sbjct: 238 GF--CAGGERMEYWSDALHIVGKDILRFHAVYWPAFLMSLGLNMPRSIAAHGWWTRDGKK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP EV    G++  RYFL+RE+  G+DG + +  +  RVN++LAN +GNL+
Sbjct: 296 MSKSLGNVVDPREVANAYGLEQFRYFLLREVPFGQDGDFSQKAIINRVNSELANELGNLL 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR V M  K  D +I +          I    +  L      ++    +R L ++   ++
Sbjct: 356 SRIVGMSAKYSDYVINSKDVMKFFTAEI-KEANSYLSAAISALEEVATNRYLEELWRALA 414

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +      +PW L K     +A  ++ +   ++ ++A+LL   +PK A +I D L    
Sbjct: 415 LANASIAKYEPWNLIKNGEQAKALALVALVANILAKVAVLLSPAMPKTAARIADTLGFEI 474

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++ L  R +      K  +P+F + 
Sbjct: 475 STPLYEKLVLRGEILDFKAKPCEPLFTKI 503


>gi|298492950|ref|YP_003723127.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234868|gb|ADI66004.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 533

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 196/525 (37%), Positives = 299/525 (56%), Gaps = 19/525 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   ++T + Y N  PHIG AY  + ADV+ARF R  G  VL  TGTDEHGQKI ++
Sbjct: 6   KTSKTFALTTPLYYVNDVPHIGSAYTTMAADVVARFQRSLGHQVLLVTGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A +     + F DQ   +F ++ +VL+I YD F RTT   H+   +  ++++ + GDIY+
Sbjct: 66  AASLEKPPQEFCDQIVPSFINLWEVLNIQYDRFSRTTALNHYAIVKEFFQRVWENGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + E+  G   +        V+W +E+ YFFRLS YQ KL  +Y+
Sbjct: 126 GQQKGWYCVSCEEFKEERELLDG--KRCPIHTSKEVEWRDEQNYFFRLSKYQTKLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P+FI P  RRNEV++FV  GL+D S+SR   DWG  +  DP++ +YVW DAL  Y+T 
Sbjct: 184 SSPDFIQPPSRRNEVLNFVGQGLQDFSISRVNLDWGFPVSVDPKHTLYVWFDALLGYVTA 243

Query: 242 TGYLDNP---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D       +  K+WP +LH+IGKDILRFHA+YWPA L+SA LPLP++VF HGF+  
Sbjct: 244 LLEPDAEATLANALEKWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPERVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ K+LGN +DPI +++  G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKTLGNTLDPISLVQRYGSDAVRYYFLKEIEFGKDGDFNETRFINVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K   G +P+       ++ ++ ++   + +++++       + A   V
Sbjct: 364 GNLLNRTLNMVKKYSTGKVPSIDPEAIPNENALKAIGLGLGEQVKQAYTALAFNEACHSV 423

Query: 418 ISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +SLV   +++ D Q PW L K    +    VLY  +E +R  A LL   +P +++ I+  
Sbjct: 424 LSLVQASNKFIDEQAPWSLYKQGKQEEVEVVLYTVLESVRLAAYLLSPIIPNISSDIYQQ 483

Query: 477 LFVADE-----------NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L                     ++   L     L  T  PIF R 
Sbjct: 484 LGWGINFNDQTETSIVAPFSTHAIWGLLSDKQQLG-TPQPIFKRI 527


>gi|322498828|emb|CBZ33901.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 747

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 213/528 (40%), Positives = 303/528 (57%), Gaps = 21/528 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F++    ++   + FIRTT   H    + +WKK+  KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKECFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLT--------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T              + D      WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+      KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDRRKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENR--CFQSLDQRLKPGFMLH--KTFDPIFPR 509
           +P+ A +I D L V +  R      L   +KP   +        IF +
Sbjct: 685 MPQKAKEIMDALGVPEAARVDMENYLFGIVKPRTKIAGLAEGQVIFQK 732


>gi|224112799|ref|XP_002316296.1| predicted protein [Populus trichocarpa]
 gi|222865336|gb|EEF02467.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/515 (36%), Positives = 284/515 (55%), Gaps = 12/515 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A  
Sbjct: 68  ETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFVTGTDEHGEKIAASAAA 127

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T     D  S+ ++ +   L+I+YD FIRTT+ +H    +  + ++  KGDIY+  Y
Sbjct: 128 AGSTPSEHCDVISQAYKTLWKDLEITYDKFIRTTDPKHEGIVKEFYSRVLAKGDIYRADY 187

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++ E+    D +       P    +E+ YFF LS YQ +L      +P
Sbjct: 188 EGLYCVNCEEYKDEKELL---DNKCCPTHLKPCIERKEDNYFFALSKYQKQLEENLTQNP 244

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  R NEV S++KSGLKD S+SR + DWGI +P+D +  +YVW DAL  Y++    
Sbjct: 245 KFVQPPFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSA 304

Query: 245 LDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +     +   +  WPA LH+IGKDILRFHA+YWPA L+SA + LPKKVF HGF+   G 
Sbjct: 305 ENEQPDLQTAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGVDLPKKVFGHGFLTKDGM 364

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN ++P E++   G DA+RYF +RE+  G DG Y ++     VNA LAN IGNL
Sbjct: 365 KMGKSLGNTLEPNELVHNFGSDAVRYFFLREVEFGSDGDYSEERFINIVNAHLANTIGNL 424

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+    +    A      ++     +++++ R + +N  +  A   V+ + 
Sbjct: 425 LNRTLGLLKKNCQSTLAVDSAVAAEGNALKDTIEKLVEKARIHYENLSLSSACEAVLEIG 484

Query: 422 SEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  + Y D   PW   K      + A+  L + +E +R +AI L    P    +I++ L 
Sbjct: 485 NAGNAYMDENAPWTRFKQGGAASEAAAKDLVIILEAMRIVAIALSPVAPSFCWRIYEQLG 544

Query: 479 VADENR---CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + ++     +         G  +     P+F R 
Sbjct: 545 YSKDHFNTVTWSGTKWGGLKGGQVMAQPKPVFARI 579


>gi|2266985|emb|CAA74281.1| MEtRS [Arabidopsis thaliana]
          Length = 616

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/519 (36%), Positives = 286/519 (55%), Gaps = 12/519 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E E   ++T + Y NA PH+G AY  I AD ++RF RL G  V+F TGTDEHG+KIA 
Sbjct: 65  VDEGETFVLTTPLYYVNAPPHMGSAYTTIAADSISRFQRLLGKKVIFITGTDEHGEKIAT 124

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY
Sbjct: 125 SAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L    
Sbjct: 185 RADYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDIL 241

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P F+ P  R NEV S++KSGL+D S+SR   D GI +PDD +  +YVW DAL  Y++
Sbjct: 242 AQNPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDXGIPVPDDDKQTIYVWFDALLGYIS 301

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                +     +   +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ 
Sbjct: 302 ALTEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLISAGLELPKMVFGHGFLT 361

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN 
Sbjct: 362 KDGMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANT 421

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V
Sbjct: 422 IGNLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAV 481

Query: 418 ISLVSEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +  + Y D + PW L K      + A+  L + +EV+R +A+ L    P L+ +++
Sbjct: 482 LEIGNAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPVAPCLSLRVY 541

Query: 475 DILFVADE---NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             L  +++   +  +         G  + +   P+F R 
Sbjct: 542 SQLGYSEDQFNSITWSDTKWGGLKGGQVMEQASPVFARI 580


>gi|322491559|emb|CBZ26831.1| putative methionyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 747

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 214/528 (40%), Positives = 303/528 (57%), Gaps = 21/528 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKGKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F+     ++   + FIRTT   H    + +WKK+  KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFTEMNYDMNYFIRTTNATHEKLVQDIWKKLEAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHEHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLT--------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T              + D      WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+     +KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDRN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLH--KTFDPIFPR 509
           +P+ A +I D L V +  R      L   +KPG  +        IF +
Sbjct: 685 MPQKAKEIMDALGVPEAARADMENYLFGIVKPGTKIAGLAEGQVIFQK 732


>gi|154149034|ref|YP_001406307.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153805043|gb|ABS52050.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 638

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 204/506 (40%), Positives = 308/506 (60%), Gaps = 10/506 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  II D LARF+RL G +  F TGTDEHGQKI +AA+  
Sbjct: 2   KKFITTPIYYVNDIPHIGHAYTTIICDTLARFYRLQGYETFFLTGTDEHGQKIEEAAKKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G + K++ D  S  FR + D  DISYD FIRTT++ H  T +  ++ +   GDIYKG Y 
Sbjct: 62  GTSPKIYADAVSAKFRSLWDYFDISYDHFIRTTDEYHIKTAQNAFEIMFANGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y +  E+++ + ++    DG+Y        Q ++EE YFFRLS Y D+LL +YE    
Sbjct: 122 GYYCVSCESFFPETQL---IDGEYCPDCGKKTQIIKEESYFFRLSKYTDRLLKWYEDEEN 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP  ++NEVISFVKSGLKDLS++R +FDWGIK+P   +DP+++MYVW+DAL NYL+  
Sbjct: 179 CILPRGKKNEVISFVKSGLKDLSITRTSFDWGIKLPEKLNDPKHVMYVWLDALINYLSAL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    +G K  FW   +H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+    G+K
Sbjct: 239 GY--TQNGEKMDFWNDTIHIVGKDILRFHAVYWPAFLMSLGLPLPKHIAAHGWWTRDGKK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P EV +  G++  RYFL+RE+  G+DG + +  +  R+N++LAN +GNL+
Sbjct: 297 MSKSIGNVVNPKEVADAYGLEQFRYFLLREVPFGQDGDFSQKAIISRINSELANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R + M  K  +  I +        + + +     L+   EN++     R L ++   ++
Sbjct: 357 NRIIGMSEKYSNFKINSKDVLKFYADEM-NETKNYLKNAVENLEEVATSRYLEELFKALN 415

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +      +PW++ K    ++A  ++ +   ++ ++A+LL   +P+ A KI   L    
Sbjct: 416 LANSSITKYEPWKMIKNGENEKALALVALVANILAKVAVLLSPAMPQTAKKIATALNFKI 475

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIF 507
               +  +    +    L +   P+F
Sbjct: 476 NTAIYNKIIVNGELLDFLAQKTQPLF 501


>gi|310689727|pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With
           Methionyladenylate And Pyrophosphate
          Length = 564

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 213/529 (40%), Positives = 305/529 (57%), Gaps = 21/529 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+
Sbjct: 22  MKKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAE 81

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   GV+   F    S  F+     ++   + FIRTT   H    + +WKK++ KGDIY
Sbjct: 82  AAAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIY 141

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDK 175
            G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++
Sbjct: 142 LGKYEGWYSVSDESFLTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRER 201

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWI 232
           LL Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+
Sbjct: 202 LLKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWL 261

Query: 233 DALTNYL--------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           DAL NY         T      + D      WPAD+HV+GKDIL+FHAIYWPAFL+SA L
Sbjct: 262 DALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSAEL 321

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           PLP+++ SHG+     +KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y   
Sbjct: 322 PLPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDK 381

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +   
Sbjct: 382 NMVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHY 440

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                I  AL  +  ++  ++ Y     PW+L K +  R  TVLYVT+E +R   + LQ 
Sbjct: 441 YCLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQP 500

Query: 465 FVPKLANKIFDILFVADENR--CFQSLDQRLKPGFMLH--KTFDPIFPR 509
            +P+ A +I D L V +  R      L   +KPG  +        +F +
Sbjct: 501 VMPQKAKEIMDALGVPEAARVGMENYLFGIVKPGTKIAGLAEGQVVFQK 549


>gi|146085927|ref|XP_001465394.1| methionyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134069492|emb|CAM67815.1| putative methionyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 747

 Score =  392 bits (1006), Expect = e-106,   Method: Composition-based stats.
 Identities = 213/528 (40%), Positives = 302/528 (57%), Gaps = 21/528 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + +T I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 206 KKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 265

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+   F    S  F+     ++   + FIRTT   H    + +WKK+  KGDIY 
Sbjct: 266 AAKQGVSPMDFTTSVSSEFKQCFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYL 325

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V  G D      +      + V W+EEE Y FRLSA++++L
Sbjct: 326 GKYEGWYSVSDESFLTAQNVADGVDKDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERL 385

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L Y+  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 386 LKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLD 445

Query: 234 ALTNYLT--------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL NY T              + D      WPAD+HV+GKDIL+FHAIYWPAFL+SA LP
Sbjct: 446 ALFNYYTGALTRVAADGTETLDEDHHTLNRWPADVHVVGKDILKFHAIYWPAFLMSAELP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+      KISKSLGN  DP+E  +E G+DAL+YFL+RE     DG Y    
Sbjct: 506 LPERLVSHGWWTKDRRKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKN 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + + +GM P P  ++ESD+++++  + +   +    
Sbjct: 566 MVARLNGELADTLGNLVSRCVAPKI-NVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY 624

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 625 CLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKTDTARLGTVLYVTMEGLRICTMFLQPV 684

Query: 466 VPKLANKIFDILFVADENR--CFQSLDQRLKPGFMLH--KTFDPIFPR 509
           +P+ A +I D L V +  R      L   +KP   +        IF +
Sbjct: 685 MPQKAKEIMDALGVPEAARVDMENYLFGIVKPRTKIAGLAEGQVIFQK 732


>gi|162448397|ref|YP_001610764.1| hypothetical protein sce0127 [Sorangium cellulosum 'So ce 56']
 gi|161158979|emb|CAN90284.1| metG1 [Sorangium cellulosum 'So ce 56']
          Length = 696

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 206/535 (38%), Positives = 296/535 (55%), Gaps = 43/535 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T I Y N  PH+G AY  I ADVL R+HRL G +    TGTDEHG KI +AA+  
Sbjct: 4   RFYVTTPIYYINDVPHLGTAYTTIAADVLCRYHRLRGHESRMLTGTDEHGLKIQRAAEAR 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV      D+ +  FR     L  + DDFIRT+E RH    + LW +I  +GDIY G Y 
Sbjct: 64  GVAPGAHADEIAAVFRATWPKLGCAPDDFIRTSEPRHKKAVQELWSRIKARGDIYLGHYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  EAYY + ++     G        P + ++EE YFFRLS Y D LL YY+ +P 
Sbjct: 124 GLYCVGCEAYYTEKDLE--QPGNVCPLHKKPAESVKEESYFFRLSRYGDALLDYYKRNPT 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  R NEV+SFV+ GL+DLS+SR TF+WGI +PDDP+++MYVW DAL NY+T     
Sbjct: 182 FVQPASRLNEVVSFVREGLQDLSVSRTTFEWGIPVPDDPKHVMYVWFDALANYMTALRE- 240

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL---PLPKKVFSHGFILHKGEK 302
                   +FWPAD+H++GKDILRFHA+YWPAFLLSA      LP++VF+HGF+ + G+K
Sbjct: 241 ---PEDNTRFWPADVHLVGKDILRFHAVYWPAFLLSAGYGEAELPRQVFAHGFLTYSGQK 297

Query: 303 ISKSLGNVIDPIEV---------------------IEEVGVDALRYFLVREIACGKDGFY 341
           +SK+L N I P+EV                        VGVD +RY L+R I+ G+DG +
Sbjct: 298 MSKTLRNTISPVEVATALSEAAAAALPGGPGAAAGAPLVGVDVVRYCLMRAISFGQDGDF 357

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +  R  ++L N +GNL++R +    +     +P  GA    +E +     +     
Sbjct: 358 SLQDVLSRYGSELGNALGNLLNRVLPFAEE-----VPAKGALGPLEEELAGAQRQAAAAA 412

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
                     RAL  + ++++  + Y D   PW  KKT+P R  T++   +E +  ++++
Sbjct: 413 ATAFDANQPTRALDAIWTVIAAANLYIDKAAPWVAKKTDPARLGTIIATLIEQLEAISVM 472

Query: 462 LQAFVPKLANKIFDILFVAD------ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   +P +A ++ + L +         +R   +L  R  PG  LH    PIFPR 
Sbjct: 473 ISPVMPVVAGRMREQLGLPPIAFEEGSDRWPMALPSR-APGEKLH-RGSPIFPRL 525


>gi|320104232|ref|YP_004179823.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751514|gb|ADV63274.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 530

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 215/522 (41%), Positives = 313/522 (59%), Gaps = 13/522 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+E    YI+TAI YPN++PHIG A+E I AD+ AR+ RL G  V F  G DE+  K+++
Sbjct: 1   MREESWFYITTAIDYPNSRPHIGTAFEKIGADIQARYQRLRGKRVRFQMGNDENTIKVSQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+  K +VD  +R F+++   LD+SYDDFI+T+E RH   CR   +++ D GDIY
Sbjct: 61  RAAQLGLEPKPYVDDMARQFQEVWRALDLSYDDFIQTSEPRHAAGCRRFIQQVFDNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y G Y    EA+  D EV +G +G+     +  ++ +EEE YFF+LS Y D LL +Y
Sbjct: 121 KKSYVGLYCDGCEAFKTDKEVAEG-NGRCPLHPNQELRRVEEENYFFKLSKYADALLDFY 179

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            SHP+FI P  RRNE+++FV++GL+DLS+SRK F WGIK+P D +  +YVW DAL NYLT
Sbjct: 180 RSHPDFIQPESRRNEIVNFVEAGLQDLSISRKGFTWGIKVPFDEEQTIYVWFDALLNYLT 239

Query: 241 TTGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             GY D  D  + + +WPAD+HVIGKDI RFH + WPA L+SA +  P++VF HGF+  K
Sbjct: 240 AIGYGDADDPDRWRAWWPADVHVIGKDITRFHCVIWPAMLMSAGIEPPRRVFGHGFVYVK 299

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K SKS GNV+DP E+ +  G DA+RY+  RE   G DG Y ++      NADLAN +G
Sbjct: 300 GAKASKSQGNVVDPHELTQRFGSDAVRYYFARECPFGGDGNYAEERFIDLYNADLANNLG 359

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI- 418
           NL SRS+SM +K +DG++   G    +         R + EI E +++   + AL ++  
Sbjct: 360 NLYSRSLSMCVKYFDGVLEEIGDVDPTAWRAGVDWPRFVAEIGELIESFQTNVALQRIWL 419

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +  V++Y  A +P+ L KT+P     V+    E +R LA+L+   +P+ A   ++   
Sbjct: 420 EGLDLVNQYIQATQPFRLVKTDPQATKVVMVNLAEALRALAVLIAPVLPRTARTFYESFD 479

Query: 479 VA-----DENRCFQSLDQRLKP-----GFMLHKTFDPIFPRF 510
                  +  R   +   ++ P       +++    P+FP+ 
Sbjct: 480 FGAQRPWETIRWEDAAVAQIVPRRRVTATLVNGKPAPLFPKI 521


>gi|206603843|gb|EDZ40323.1| Methionyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 673

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 195/511 (38%), Positives = 288/511 (56%), Gaps = 18/511 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LY++T I Y N  PHIGHAY  +  DVLAR  R+ G  V F TGTDEHGQK+ ++AQ A 
Sbjct: 12  LYLTTPIYYVNDIPHIGHAYTTVACDVLARTGRMSGRPVFFLTGTDEHGQKVWQSAQKAN 71

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ +++VD+    FRD+   L IS DDF+RTT+ RH    + +  ++   G+IY+G Y G
Sbjct: 72  LSPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEG 131

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY L DE ++ + +V +G           PV+ + E  YFFR+S +QD L+S+Y  HPE 
Sbjct: 132 WYCLYDERFWTEKDVTEG----LCPDCRRPVEQVRETNYFFRMSRHQDWLVSWYREHPEA 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P  R NE++ F++  L+DL +SR      WGI +P D +Y+ YVW DAL NY++    
Sbjct: 188 IRPESRYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVPLS 247

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             + + +  + WPA  HV+GKDIL  HA+YWP  L +  L  P+ +F+HG+    GEK+S
Sbjct: 248 GPDGEAALKRLWPA-THVVGKDILTTHAVYWPTLLHAMGLEPPRLIFAHGWWTVNGEKMS 306

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN +DPI+   + G D LRYFL+RE   G+D  +    L  R+NADLAN +GNL+SR
Sbjct: 307 KSRGNAVDPIQYAGKYGPDTLRYFLLREGQFGQDADFSDKALIGRINADLANDLGNLLSR 366

Query: 365 SVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            V+M +   KD     PT    +     + +   R+L ++ +   N   H+ALA + S V
Sbjct: 367 VVAMAIRASKDGQFTRPTGHTLSP---ELAAEAERLLTDVPKFTLNFEFHKALASLWSFV 423

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           S ++R+ D++ PW L +         TVL   +E +R + + L  ++P+ +  IF  L  
Sbjct: 424 SVLNRHVDSRAPWVLARDPQKQGELETVLSDLLEGLRLVGVYLAPYMPETSAAIFTALSA 483

Query: 480 ADENRCFQSLDQRL---KPGFMLHKTFDPIF 507
            +           L    P  +      P+F
Sbjct: 484 RESITGLSYEKDGLGGSLPETLSLAPISPLF 514


>gi|296086256|emb|CBI31697.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 185/514 (35%), Positives = 276/514 (53%), Gaps = 14/514 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA AA   G
Sbjct: 70  FVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIATAAAACG 129

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            +     D  S+ ++ +   LDI+YD FIRTT  +H    +  + ++   GDIY+  Y G
Sbjct: 130 SSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDIYRADYEG 189

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L      +P+F
Sbjct: 190 LYCINCEEYKDEKELL---ENNCCPMHLKPCVLRKEDNYFFALSKYQKLLEETLTQNPDF 246

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           + P  R NEV S++KSGL+D S+SR + DWGI +P+D +  +YVW DAL  Y++     +
Sbjct: 247 VQPSFRLNEVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSEDN 306

Query: 247 NPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                ++     WPA LH+IGKDILRFHA+YWPA LLSA L LPK VF HGF+   G K+
Sbjct: 307 EQPDLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGFLTKDGMKM 366

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGN ++P ++++  G DA+RYF +RE+  G DG Y +D     VNA LAN IGNL++
Sbjct: 367 GKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLANTIGNLLN 426

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ ++ K+    +           +      +++++ +   +N  +  A   V+ + + 
Sbjct: 427 RTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACEAVLEIGNA 486

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + Y D + PW L K     +          +E +R +AI L    P+L+ +I++ L   
Sbjct: 487 GNLYIDERAPWSLFKQGAAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLRIYEQLGYT 546

Query: 481 DENRCFQSL----DQRLKPGFMLHKTFDPIFPRF 510
            E     +        LK G  +     P+F R 
Sbjct: 547 KEQFNATTWSETEWGGLKSG-QVMAQPKPVFARI 579


>gi|119512207|ref|ZP_01631297.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
 gi|119463173|gb|EAW44120.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
          Length = 533

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 200/524 (38%), Positives = 300/524 (57%), Gaps = 17/524 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++  ++T + Y N  PH+G AY  I ADV+ARFHRL G +VL  TGTDEHGQKI ++
Sbjct: 6   KTEKRFALTTPLYYVNDVPHVGSAYTTIAADVVARFHRLLGHEVLLITGTDEHGQKIQRS 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G   + F DQ   +F  +  +L+I YD F RTT  RH    +  + ++ +KGDIY+
Sbjct: 66  AESLGKPPQEFCDQIVPSFIKLWQLLNIQYDRFSRTTASRHEAIVKEFFMRVWEKGDIYQ 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G   GWY +  E +  + ++ +G   +     +  V+W +E+ YFF LS YQ +L  +Y+
Sbjct: 126 GKQKGWYCVSCEEFKEERDLLEG--KRCPIHTNKEVEWRDEQNYFFSLSKYQTQLEEFYQ 183

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           S P+FI P  RRNEV+SFV  GL+D S+SR   DWG ++P D Q+ +YVW DAL  Y+T 
Sbjct: 184 SRPDFIQPESRRNEVLSFVSQGLQDFSISRVNLDWGFRVPVDSQHTLYVWFDALLAYVTA 243

Query: 242 TGYLDNPD---GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               D       +   +WP +LH+IGKDILRFHA+YWPA L+SA LPLP +VF HGF+  
Sbjct: 244 LLEADAEPTLANALETWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPDQVFGHGFLTK 303

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KSLGN +DPI ++E  G DA+RY+ ++EI  GKDG +++      +NADLAN +
Sbjct: 304 DGQKMGKSLGNTLDPIGLVESYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLANDL 363

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+++M+ K       T G    +DE+ + ++   + ++++++ Q    ++A    
Sbjct: 364 GNLLNRTLNMVKKYCSNDGLTIGNEAINDENPLKAIGLGLGEQVKQSYQALAFNQACEAT 423

Query: 418 ISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV   +++ D Q PW L K        TVLY  +E +R  A LL   +P ++N I+  
Sbjct: 424 LLLVRTCNKFIDEQAPWSLYKQGKQQEVETVLYAVLESVRLAAYLLSPVIPNISNAIYLQ 483

Query: 477 LFVADENRC----------FQSLDQRLKPGFMLHKTFDPIFPRF 510
           L    +                    L           P+F R 
Sbjct: 484 LGFGIDFNDQVKTSMLAPFATHAQWGLLSSEQSLGKPLPVFKRI 527


>gi|257784887|ref|YP_003180104.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473394|gb|ACV51513.1| methionyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 536

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 198/533 (37%), Positives = 312/533 (58%), Gaps = 26/533 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   +I+T I Y NA+PH+G AY  ++ D+ ARF R  G DV F TG DEHG+K+A A
Sbjct: 3   EAKPSYFITTPIYYVNAKPHLGTAYCTLLCDIQARFRRAAGYDVFFLTGMDEHGEKVALA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G++ + + D     F+ + + L+ISYDDFIRTT++RH    + LW+++ + G IYK
Sbjct: 63  AADHGLSPQAWCDSQVPFFKGLYEELNISYDDFIRTTDERHVKAVQYLWERMREAGFIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           G Y GWY + +E ++ + +V K     G  G       H  ++ + EE +FF+LSA+QDK
Sbjct: 123 GSYDGWYCIHEETFFTETQVEKADEEAGCKGAHLCPDCHRELERVSEESWFFKLSAFQDK 182

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL  Y  HP+FI P  R NEV SFV+SGL+D+S+SR +FDWGI +P D  ++ YVW DAL
Sbjct: 183 LLELYAEHPDFIEPDFRANEVRSFVESGLQDISVSRTSFDWGIPVPFDESHVTYVWFDAL 242

Query: 236 TNYLTTTGYLDNPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            NY T  GY D+   +   + +FWPA +HV+GKDI+RFH + WPA L++    +P+ +F+
Sbjct: 243 LNYYTAVGYGDDSPEAAAMRKRFWPAQMHVVGKDIIRFHCVIWPAMLMALGEAVPEHIFA 302

Query: 293 HGFILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           HGF+  +       EK+SKS GN I P +V++ +GV+  RY+ + ++  G+D     + +
Sbjct: 303 HGFLNVRNSETGVVEKMSKSRGNAIAPKDVLDLLGVEGYRYYFMTDVTPGEDSGISFERM 362

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENM 405
           ++  NADLAN  GNLVSR+++M  K ++G+ PT  G+   +D  +  +   +       M
Sbjct: 363 EQVYNADLANSWGNLVSRALNMSDKYFEGVTPTFDGSSVAADHPLRKLAEGIYDRYATCM 422

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462
           +      A   ++ LV   + Y +   PW + K +P+RA   + ++Y  +E IR  A L 
Sbjct: 423 EKMDYVGAKNIIMELVHAANHYIEDAAPWTVAK-DPERAAELAEIIYTLLESIRICAHLF 481

Query: 463 QAFVPKLANKIFDILFVAD-----ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             F+P  + ++   + + +      +   +    RL+ G  + K  D +FPR 
Sbjct: 482 MPFMPTTSTEVLRRMSLDEVEINSTDARSECTWGRLQGGLAVSK-GDALFPRL 533


>gi|229823542|ref|ZP_04449611.1| hypothetical protein GCWU000282_00840 [Catonella morbi ATCC 51271]
 gi|229786986|gb|EEP23100.1| hypothetical protein GCWU000282_00840 [Catonella morbi ATCC 51271]
          Length = 640

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 194/489 (39%), Positives = 290/489 (59%), Gaps = 12/489 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           + R+ RL G D  F TGTDEHGQKI + A+  GV+ K +VD+ +   + +  +LDI Y  
Sbjct: 1   MTRYKRLQGFDAFFLTGTDEHGQKIERTAEGLGVSPKQYVDEMADIIKKLWALLDIDYSH 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQY- 149
           FIRTT+  H    +  ++++  + DIY G YSGWYS+ DE ++ ++   EVY+ ADG   
Sbjct: 61  FIRTTDDYHEKAVQDAFEQLLAQDDIYLGEYSGWYSVSDEEFFTENQLVEVYRDADGNVT 120

Query: 150 --YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKD 206
                  N V  ++EE YFFR+S Y D+L+ YYE H +F+ P  R+ E+I+   K GL+D
Sbjct: 121 GGVAPTGNEVTLVKEESYFFRMSKYADRLVQYYEDHADFLEPAFRKTEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR TF WG+ +  +P++++YVWIDAL NY+T  GY  +      K+WPAD HVIGKD
Sbjct: 181 LAVSRTTFTWGVPVKSNPKHVIYVWIDALLNYITALGYGSDDTSRYNKYWPADAHVIGKD 240

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I RFH IYWP  L++  LPLPKK+F+HG+ L K  K+SKS GNVI P  ++E  G+DA R
Sbjct: 241 ISRFHMIYWPTILMALGLPLPKKIFAHGWYLMKEGKMSKSKGNVIYPETLVERYGLDATR 300

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           ++L+ E+  G D  +  +G  + VN++LAN +GNL++R+V+M+ K + G +PT G   T 
Sbjct: 301 FYLLHEMGVGNDAVFTPEGFVQLVNSELANDLGNLLNRTVAMMNKYFQGQVPTEGLEATA 360

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DR 443
            D    +     +    + M    +  AL+ V+ +VS  ++Y D   PW L K      +
Sbjct: 361 VDADYDAYVKEQIAAYYQAMDAMSLSAALSHVMDIVSRTNKYIDETMPWVLVKEEATLGQ 420

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSL-DQRLKPGFMLHK 501
             +V+    E +R +A L + F+ +   KIF+ L ++D+ +  F  L       G  +  
Sbjct: 421 LRSVMNHLAEALRLVAHLSRPFMTQAPAKIFEQLGLSDQMDLDFTQLVYGAFPAGASVVA 480

Query: 502 TFDPIFPRF 510
              PIFPR 
Sbjct: 481 KGTPIFPRL 489


>gi|300870561|ref|YP_003785432.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688260|gb|ADK30931.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 649

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 201/518 (38%), Positives = 304/518 (58%), Gaps = 11/518 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K YI+T I YP+   HIGH Y  I  D +AR+ ++ G DV F TGTDEHG+KI +
Sbjct: 1   MTDK-KFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIQR 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ A  T K +VD      + +   L I Y  +IRTT+  H    + ++K++ DKG IY
Sbjct: 60  KAEEAKTTPKEYVDNIVDATKKLWKRLHIDYSHYIRTTDDYHERRVQNIFKQLYDKGYIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           KG Y G Y + DEA++ + +V K  DG  Y       +++ EEE Y+ +LS + D L++Y
Sbjct: 120 KGSYKGLYCVSDEAFFTESQVVKKDDGKCYCPDCEKELEYKEEECYYLKLSEFGDWLINY 179

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ HPEF+ P ER+NE++      GL+DL+++RK   WGI  P D ++ +YVWIDAL+NY
Sbjct: 180 YKEHPEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLKWGIPCPIDNEHSIYVWIDALSNY 239

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL- 297
           +T  GY    D    K+WP D+H +GK+I+RFHAI WP  L   ++PLPKKVF HG++L 
Sbjct: 240 ITALGY-SEEDELYKKYWPCDVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVFGHGWVLF 298

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKS GNV+DP  +I++ GVDALRYFL+REI  G DGFY ++   KR+N+DLAN 
Sbjct: 299 DDGKKMSKSRGNVVDPNALIDKYGVDALRYFLMREINFGVDGFYSQEIFLKRINSDLAND 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            GNL  R  +M+ K +DG++P      +++ +  +      +   +   + +     AL 
Sbjct: 359 YGNLWHRITTMLGKYFDGILPEEVESVYSDRERELKKAVLTLDANVESALDSFKFQEALF 418

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  ++  V++Y +   PW L K    R   + V+Y++ +    +   LQ F  +   K+
Sbjct: 419 NIWEVIRMVNKYVEESAPWNLAKDESKRDHLANVMYISFQAYYIVTAYLQIFFVETPKKV 478

Query: 474 FDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
           F+ L + D      +     LK G  + K  +P+F R+
Sbjct: 479 FNRLGLGDSVPLEDAKKWGSLKAGIKIEK-GEPLFNRY 515


>gi|296126295|ref|YP_003633547.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018111|gb|ADG71348.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 651

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 200/520 (38%), Positives = 310/520 (59%), Gaps = 13/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K YI+T I YP+   HIGH Y  I AD +AR+ ++ G DV F TGTDEHG+KIA+
Sbjct: 1   MTDK-KFYITTPIYYPSDYLHIGHCYCTIAADTMARYKKIMGYDVYFLTGTDEHGEKIAR 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ A  T K +VD      +++   L I Y  +IRTT+  H    + ++K + DKG IY
Sbjct: 60  KAEAADTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           KG Y G Y + DEA++ + +V K  DG  Y       +++ EEE Y+ +LS Y   L+ Y
Sbjct: 120 KGAYKGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDY 179

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ HPEF+ P ER+NE++      GL+DL+++RK   WGI  P D ++ +YVWIDAL+NY
Sbjct: 180 YKDHPEFLEPKERQNEMLKNFLLPGLEDLAVTRKGLQWGIPCPVDSEHSIYVWIDALSNY 239

Query: 239 LTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T  GY ++ +     K+W  D+H +GK+I+RFHA+ WP  L   ++PLPKKVF HG++L
Sbjct: 240 ITALGYPEDGEDDLYKKYWSCDVHFVGKEIVRFHAVIWPIMLKMLDIPLPKKVFGHGWVL 299

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKS GNV+DP  +I++ GVDALRYFL+REI  G DG+Y ++   KR+N+DLAN
Sbjct: 300 FDDGKKMSKSRGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLAN 359

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             GNL  R  +M+ K ++G++P      F + ++ +  +   +   +   + +   H AL
Sbjct: 360 DYGNLWHRITTMLGKYFNGVLPDEAESVFGDREKELKKMVLTLDANVESALDSFKFHEAL 419

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + +  ++   ++Y +   PW L K    +   + V+Y++ +V   +   LQ F  +   K
Sbjct: 420 SYIWEVIRMTNKYVEESAPWNLAKDEAKKDHLANVMYISFQVYYIVTAYLQIFFVETPKK 479

Query: 473 IFDILFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           +F+ L + D +   +S      LK G  + K  +P+F R+
Sbjct: 480 VFNRLGLGD-SVSLESAKKWGSLKAGTKIEK-GEPLFNRY 517


>gi|124515022|gb|EAY56533.1| Methionyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 673

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 194/514 (37%), Positives = 289/514 (56%), Gaps = 18/514 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  LY++T I Y N  PHIGHAY  +  DVLAR  R+ G  V F TGTDEHGQK+ ++AQ
Sbjct: 9   KNWLYLTTPIYYVNDIPHIGHAYTTVACDVLARTGRMSGRPVFFLTGTDEHGQKVWQSAQ 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A ++ +++VD+    FRD+   L IS DDF+RTT+ RH    + +  ++   G+IY+G 
Sbjct: 69  KANLSPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGL 128

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY L DE ++ + +V +G           PV+ + E  YFFR+S +QD L+S+Y  H
Sbjct: 129 YEGWYCLYDERFWTEKDVTEG----LCPDCRRPVEQVRETNYFFRMSRHQDWLVSWYREH 184

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           P+ I P  R NE++ F++  L+DL +SR      WGI +P D +Y+ YVW DAL NY++ 
Sbjct: 185 PDAIRPESRYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSV 244

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
                + + +  + WPA  HV+GKDIL  HA+YWP  L +  L  P+ +F+HG+    GE
Sbjct: 245 PLSGPDGESALKRLWPA-THVVGKDILTTHAVYWPTLLHAMGLEPPRLIFAHGWWTVNGE 303

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DPI+   + G D LRYFL+RE   G+D  +    L  R+NADLAN +GNL
Sbjct: 304 KMSKSRGNAVDPIQYAGKYGPDTLRYFLLREGQFGQDADFSDKALIGRINADLANDLGNL 363

Query: 362 VSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           +SR V+M +   KD   + PT    +     + S   R+L ++ +   N   H+ALA + 
Sbjct: 364 LSRVVAMAIRASKDGQFIRPTGHTLSS---ELASEAERLLTDVPKLTLNFEFHKALASLW 420

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           S VS ++R+ D++ PW L +          VL   +E +R + + L  ++P+ +  IF  
Sbjct: 421 SFVSVLNRHVDSRAPWVLARDPEKQGELEIVLSDLLEGLRLVGVYLAPYMPETSVAIFTA 480

Query: 477 LFVADENRCFQSLDQRL---KPGFMLHKTFDPIF 507
           L   +           L    P  +      P+F
Sbjct: 481 LSARESITGLSYEKDGLGASLPETLSLAPISPLF 514


>gi|320106556|ref|YP_004182146.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319925077|gb|ADV82152.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 709

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 207/559 (37%), Positives = 306/559 (54%), Gaps = 65/559 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y++T I Y NA+PHIGHAY  + AD +AR  RL G D  F TGTDEHGQKI ++A
Sbjct: 4   KKDKFYLTTPIYYVNARPHIGHAYTTLTADTIARRKRLQGFDTYFLTGTDEHGQKIQRSA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG+  + F DQ S  FR + D + ++YD +IRTT++ H    + L+  + ++G I   
Sbjct: 64  EAAGIPPQQFADQVSEQFRALWDRMGVTYDQYIRTTDEAHKRGAQKLFTTLYERGFIELR 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+G YS+ +E +        G DG          + + EE +FF+LS +Q +L+    S
Sbjct: 124 SYTGQYSIGEEMFVEGPPGTIGPDG-------KLTETVTEENFFFKLSEFQTQLIDLIGS 176

Query: 183 HPEFILPIERRNEVISFVKSG--------------------LKDLSLSRKTFDWGIKIP- 221
           +   I P  R+NEV+SF++                      L+DLS+SR +F WGI +P 
Sbjct: 177 NELEITPEARKNEVLSFLRGNVNDTDATAVSAAGHKYIPGALRDLSISRSSFTWGIPVPE 236

Query: 222 -----DDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADLHVIGKDILRFHAI 273
                 + ++++YVW+DAL NY+T  GY  +         K+WPADLH++GK+I RFH +
Sbjct: 237 IVAGLTEQKHVIYVWLDALANYMTAVGYGSDDPADIAKFEKYWPADLHIVGKEITRFHCV 296

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG------------ 321
           YWPAFLL+A LPLPKK+ +HG++L +  K+SKS GN++    ++E  G            
Sbjct: 297 YWPAFLLAAGLPLPKKIVAHGWLLFEESKMSKSRGNIVRSETILEGFGSIKPDLPKAEQD 356

Query: 322 ---VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRYFL+REI  G+DG +  D +  R NADLANG GNLVSR++SM+ K++ G++P
Sbjct: 357 LFAADVLRYFLLREIPFGQDGSFSFDAMVTRYNADLANGYGNLVSRTLSMVEKNFGGVLP 416

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P     SDE        +   I  +   Q   RA   +  +++  DR+F    PW+L K
Sbjct: 417 AP-----SDEIPNGEFETLAALIDADFDTQTFTRATTSIAQMITNADRFFSEAAPWKLAK 471

Query: 439 TNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD------ 490
               R     VLY + E IR +  LL   +P    +++  L + D  +  ++ +      
Sbjct: 472 EEASREKFGDVLYRSAESIRTITALLYPILPYATAQVWRQLGLGDIEQAAKNGELNNLHW 531

Query: 491 QRLKPGFMLHKTFDPIFPR 509
             LKPG  L     PIFPR
Sbjct: 532 GGLKPGTKLG-PLAPIFPR 549


>gi|284929295|ref|YP_003421817.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809739|gb|ADB95436.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 536

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 187/524 (35%), Positives = 297/524 (56%), Gaps = 18/524 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +K  ++T + Y N  PH+G AY  +IADV++R+ +L G +VLF TGTDEHGQKI + A
Sbjct: 7   KPKKFVLTTPLYYANDLPHVGSAYTTMIADVISRYKKLKGEEVLFITGTDEHGQKIERNA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   +  +   D+   +F+ + D LDI YD F RTT+ +H       ++++ D GDIY  
Sbjct: 67  EANNLPAQEHCDRIVSSFKLLWDKLDIQYDRFSRTTDTQHQKIVYEFFQRVWDNGDIYLS 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              GWY +  E +  + E+    +G      +   +W +EE YFF+LS YQ +L   Y++
Sbjct: 127 RQQGWYCVACEEFKEERELL--ENGCCPVHFNKKAEWYDEENYFFKLSKYQSQLEELYKN 184

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +PEFI P   RNE++ FV  GLKD S+SR    WG  +P+DP + +YVW DAL  Y+T  
Sbjct: 185 NPEFIKPKSCRNEILKFVNQGLKDFSISRVNVKWGFTVPNDPNHTIYVWFDALLGYITAL 244

Query: 243 GYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
              ++ D +      + WP +LH+IGKDILRFHA+YWPA L+SA L LP+ +F HGF+  
Sbjct: 245 LESESKDSTLDNAISQGWPVNLHLIGKDILRFHAVYWPAMLMSAKLSLPEYIFGHGFLTK 304

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+ KS GN +DP E++ + G D +RY+ ++EI CGKDG +++      VNADLA+ +
Sbjct: 305 DGQKMGKSSGNTLDPFELVNKYGPDPIRYYFLKEIECGKDGDFNETRFINTVNADLADDL 364

Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R++ M  K  +G + P  G     +  +  +   + + + +   N   +    ++
Sbjct: 365 GNLLNRTLGMTQKYCEGLLPPMSGIDLPKEHPLKKIGLNLGENVIKAYDNLKFNEGCEEI 424

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +L+   +++ D Q PW L KK        +LY  +E +R +A LL   +P L++KI+  
Sbjct: 425 FTLIRASNKFIDEQAPWTLFKKGEQKEVEKILYGVLESVRLVAYLLAPIIPNLSSKIYKQ 484

Query: 477 LFVADENRCFQSLDQRLK------PGFMLH----KTFDPIFPRF 510
           L  + +    + L++ +        G + H        PIF + 
Sbjct: 485 LGFSVDFNQVECLEEVIPFDKHSQWGKLAHNNFLSKPQPIFVKL 528


>gi|22298292|ref|NP_681539.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|25009348|sp|P59081|SYM_THEEB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|22294471|dbj|BAC08301.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 529

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 192/520 (36%), Positives = 292/520 (56%), Gaps = 15/520 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++T + Y NA PHIG AY  I ADVLARF+RL G  V F TGTDEHGQKI + AQ 
Sbjct: 3   PHFSLTTPLYYVNALPHIGSAYTTIAADVLARFYRLQGYQVRFITGTDEHGQKIERTAQQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+ +  F+ +   L+I YD F RTT  RHH      ++++ D GDIY G  
Sbjct: 63  RGLSPQAHCDEIAAGFQALWQQLNIHYDRFSRTTSPRHHAIVNEFFQRVWDNGDIYLGQQ 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY +  E +  + E+ +G   +     +  V+W +E  YFFRLS YQ  LL +Y  HP
Sbjct: 123 QGWYCVECEEFKEERELLEGR--RCPIHVNRTVEWRDERNYFFRLSKYQQALLDHYAEHP 180

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNEV+SF++ GL+D S+SR    WG  +P DP+  +YVW DAL  Y+T    
Sbjct: 181 DFVQPPSRRNEVLSFIERGLQDFSISRVNLAWGFPVPTDPEQTLYVWFDALLGYVTALLE 240

Query: 245 LDNPD---GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            ++      +   +WP +LH+IGKDILRFH I WPA L+SA LPLP+++F HGF+   G+
Sbjct: 241 PEDEPTLANALKTWWPINLHIIGKDILRFHGISWPAMLMSAGLPLPEQIFVHGFLTKDGQ 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN +DP  ++ + G DA+RY+ ++E+  G+DG + +      +NADLAN +GNL
Sbjct: 301 KMGKSLGNTLDPFALVAQYGADAVRYYFMKEVEFGRDGDFSETRFVTILNADLANDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           ++R++ M  K  DG +P   GA    +  +  +   + Q   +  +    H    Q ++L
Sbjct: 361 LNRTLKMAWKYTDGKVPNVQGAAIPREHPLRQLAEHLSQTYGQGYRQLAFHEVCQQALTL 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF- 478
               +++ D + PW+  +     A + +LY  +E +R +A +L   +P+L+  I+  L  
Sbjct: 421 ARAGNKFLDEEAPWKRYRAGETAAVAEILYCVLESVRLVAYVLAPIIPQLSEAIYGQLGY 480

Query: 479 -------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
                  +A +    +     + P        +PIF + L
Sbjct: 481 SIRFNGSIAPDLLGDRQAQWGVLPASQPLANPEPIFQKLL 520


>gi|302038229|ref|YP_003798551.1| methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606293|emb|CBK42626.1| Methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 663

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 201/525 (38%), Positives = 288/525 (54%), Gaps = 28/525 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R+  YI+T I Y N  PHIGHAY  + ADVLAR+ RL G DV F TG DEHGQK+ +
Sbjct: 1   MNKRDTFYITTPIYYVNDVPHIGHAYTTVAADVLARYWRLRGRDVFFLTGLDEHGQKVQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGV  +   D+ +  F ++   L+IS D FIRTT+K H    +   +++ DK  IY
Sbjct: 61  AAAKAGVAPQAHCDRLAPQFTNLWQRLNISNDAFIRTTDKPHQAVVQRYLQQLYDKQLIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWY   DE ++ + +V  G           P++ + E  YFF++  YQ++L+ + 
Sbjct: 121 KADYTGWYCTYDERFWTEKDVVNG----LCPDCKRPIERLSEHNYFFKMGQYQERLIEHI 176

Query: 181 ESHPEFILPIERRNE---VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +H +FI P+ RRNE    +   K G   +S  +    WGI++P D +Y+ YVW DAL N
Sbjct: 177 RTHDDFIRPVSRRNEVLGFLQTQKLGDLSISRPKSRLSWGIELPFDKEYVTYVWFDALVN 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y++   Y         +FWPAD H++GKDIL  HA+YW   L++   PLP  +F+HG+  
Sbjct: 237 YVSALEYKPG----LERFWPADAHLVGKDILTTHAVYWSTMLMALERPLPHSIFAHGWWT 292

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             GEK+SKS GNV+DP  +I++ G DA RYFL+RE+  G+DG + +  +   +N+ LANG
Sbjct: 293 VDGEKMSKSRGNVVDPNAMIDQFGADAFRYFLLREVPFGQDGDFSRTTMVTTINSALANG 352

Query: 358 IGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           IGNL+SR+++MI +   G IP   P    E ++ I  V  ++   I       L    L 
Sbjct: 353 IGNLLSRTLTMIERSCAGTIPDRGPAVLPELEQRIEDVARQLPGRIEAGYNALLFRDVLL 412

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L S  D Y D   PW+L K      +  TVL  +   +R LAILL  F+P  A ++
Sbjct: 413 MVEELNSACDEYIDKSAPWKLAKQPEAQPQLHTVLNTSARALRLLAILLYPFMPTAAQQM 472

Query: 474 FDILF--------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              L         V+DEN  +     +   G  + K    +FPR 
Sbjct: 473 IHQLGLSLDLSQPVSDENSSWD----KTLAGSRIQKGAS-LFPRI 512


>gi|297820298|ref|XP_002878032.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323870|gb|EFH54291.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 615

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 187/515 (36%), Positives = 284/515 (55%), Gaps = 12/515 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA +A  
Sbjct: 68  DTFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAA 127

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY+  Y
Sbjct: 128 NGRNPPEHCDIISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADY 187

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L      +P
Sbjct: 188 EGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNP 244

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y++    
Sbjct: 245 RFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYISALTE 304

Query: 245 LDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +     +   +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+   G 
Sbjct: 305 DNKQQNLETAVSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTKDGM 364

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN IGNL
Sbjct: 365 KMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTIGNL 424

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+ +  +            +     +++++ + N +N  +  A   V+ + 
Sbjct: 425 LNRTLGLLKKNCESTLVEDSTVAAEGVPLKDTVEKLVEKAQTNYENLSLSSACEAVLEIG 484

Query: 422 SEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  + Y D + PW L K      + A+  L + +EV+R +A+ L    P L+ +I+  L 
Sbjct: 485 NAGNTYMDQRAPWFLFKQGGVSAEEAAKDLVIILEVMRVIAVALSPIAPCLSLRIYSQLG 544

Query: 479 VADE---NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + +   +  +         G  + +   P+F R 
Sbjct: 545 YSVDQFNSITWSDTKWGGLKGGQVMEQASPVFARI 579


>gi|224438096|ref|ZP_03659035.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144540|ref|ZP_07806733.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129571|gb|EFR47188.1| methionyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 655

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 191/516 (37%), Positives = 302/516 (58%), Gaps = 16/516 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K +I++ I Y N  PHIGHAY  I+ D+L +F  L G DVLF TGTDEHGQKI ++AQ
Sbjct: 2   QQKTFITSPIYYVNDIPHIGHAYTTILCDMLKKFRILQGEDVLFLTGTDEHGQKIEQSAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T + + D  S  F+++ +   + YD F+RTT+ +H  + +  ++ + +KGDIYKG 
Sbjct: 62  KHNQTPQAYADSVSVKFKELWNEFQLDYDIFVRTTDSKHCQSVQKAFEIMFEKGDIYKGS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E+++   ++ +         Q   VQ   EE YFF LS YQDKLL +Y+ +
Sbjct: 122 YEGNYCVSCESFFTQSQLGENLSCPDCGKQTQIVQ---EESYFFALSKYQDKLLEFYKQN 178

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP------QYIMYVWIDALTN 237
           P  I P  R+NEV+ F+  GL DLS++R +F+WGI + ++P      ++ +YVW+DAL +
Sbjct: 179 PNMIAPAFRQNEVVKFISEGLNDLSITRTSFEWGIPLLENPKRNDNKKHTIYVWLDALLS 238

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y++  GY+ +    K ++W   LH +GKDILRFHA+YW AFL+S +LPLPK +++HG+  
Sbjct: 239 YISPLGYMQDSH--KMEYWENALHFVGKDILRFHAVYWIAFLMSLDLPLPKHIYAHGWWT 296

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKS+GNVIDP  V +  G+++LRYFL+RE+  G+DG + +  L +R+N++L N 
Sbjct: 297 KDGAKMSKSIGNVIDPKAVAQAYGIESLRYFLMREMPFGQDGDFSQKALIERINSELGND 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL++R + M  K +  +        +   + L+    ++   +E MQ     R + ++
Sbjct: 357 VGNLLNRLLGMSEKYF-SLQVDSKDVKKFYATELNELEHIINRTQEKMQTMQPQRYIEEL 415

Query: 418 ISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  S  +      +PW L K    D+A  +L +   ++ + A+LL   +P+ A+KI   
Sbjct: 416 WAAFSLGNGVITKYEPWNLMKNAEQDKAMALLGLIANILAKAALLLYPIMPESAHKIAKA 475

Query: 477 LFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           L ++     F  L     L     L K   P+FPR 
Sbjct: 476 LSLSISPDSFDRLIKQHALLDDLTLTK-IPPLFPRI 510


>gi|224369775|ref|YP_002603939.1| methionyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223692492|gb|ACN15775.1| MetS [Desulfobacterium autotrophicum HRM2]
          Length = 648

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 195/520 (37%), Positives = 287/520 (55%), Gaps = 17/520 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK  +  Y +T I Y NA+PH+GHAY  I  DV AR+ R+      F TGTDEHG KI +
Sbjct: 1   MKTSDPRYFTTPIYYVNAKPHLGHAYTTIATDVAARYSRMCARPTYFLTGTDEHGDKIVE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA     + K +VD+ S  F+++   L+IS D FIRTT+  H      L  +I + GDIY
Sbjct: 61  AATREETSPKAYVDRISALFKNLWPRLNISNDHFIRTTDPDHIKVVENLLTRIHESGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              Y G Y    E +Y + E+    DG+  +    P + ++E  YFF +  YQD L+ + 
Sbjct: 121 FSEYEGIYCFGCERFYQERELV---DGKCPDHGTVP-KKIKESNYFFAMGKYQDWLIDHI 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+FI P   RNEV+SF+K  L+DL +SR      WGI +P D  Y+ YVW DALTNY
Sbjct: 177 TRNPDFIRPERYRNEVLSFLKEPLEDLCISRPKSRLTWGITLPFDHDYVTYVWFDALTNY 236

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L+  GY D        FWP   H + KDI++ H IYWP  L +A +   + +  HGF   
Sbjct: 237 LSALGYPDGER--FKTFWPHTRHFVAKDIIKPHGIYWPCMLKAAGIDPYQSLNVHGFWNV 294

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS+GNV DP+E+I+  GVD  RYFL+RE+  G D  + +D + +R+N+DLAN +
Sbjct: 295 GGSKMSKSIGNVTDPVEIIDTYGVDTFRYFLMREMVFGLDSNFTEDSIVQRINSDLANDL 354

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL SR VSM+ + + G  P      + D S+       +++   +M+    H+AL  V 
Sbjct: 355 GNLFSRVVSMVHRYFKGETPGVDKGLDKDLSLEHQAWECVEKFTLHMEETEFHKALISVW 414

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +S ++RY D Q PW L K    +    TV+Y  V+ +R ++ L+   +P  ++++  I
Sbjct: 415 EFISTMNRYIDTQAPWTLSKDPEKKPALETVMYNLVQGLRTVSCLIYPIMPDTSHRMLTI 474

Query: 477 LFV-ADENRCFQSL-----DQRLKPGFMLHKTFDPIFPRF 510
           L +    +R F ++        +K G ++ K    +FPR 
Sbjct: 475 LNIQPPRDRDFYTMAEIFPWHGVKAGTLIQKAP-VLFPRI 513


>gi|88607461|ref|YP_505630.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598524|gb|ABD43994.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 513

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 222/516 (43%), Positives = 320/516 (62%), Gaps = 14/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +    ++T I Y N  PHIGH Y  +I+DVLARF RLDG +V FTTGTDEHGQKI +
Sbjct: 1   MSSK-HFCVTTPIYYVNDVPHIGHFYTTLISDVLARFKRLDGDNVKFTTGTDEHGQKIEE 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G     FVD+ S +FR++        DDFIRTTE RH D    LW ++  +G IY
Sbjct: 60  TARKRGTPVLQFVDEVSESFRELVHKSGFCADDFIRTTESRHKDAVVALWDRLYSRGQIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y+G+YS+RDE +Y + ++  G            V W+EE GYFF+LS +Q+ LL  Y
Sbjct: 120 KGSYAGFYSVRDETFYQERDLIDGK-----APTGAEVTWLEEPGYFFKLSEWQEALLQLY 174

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
           + +P F++P  + +EVISFVKSGL+DLS+SR      WGI +P DP++++YVW+DAL+NY
Sbjct: 175 QDNPRFVVPEGKLSEVISFVKSGLRDLSVSRSKAHLSWGIGVPGDPEHLIYVWVDALSNY 234

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L   G+ +        FW  +    +HV+GKDIL+FHA+YWPA L++A LPLPK+V +HG
Sbjct: 235 LALVGFPNEDAEDYNNFWCGENSHVVHVVGKDILKFHAVYWPALLMAAGLPLPKQVVAHG 294

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + L++G+KISKSLGNVI P+ +I E G+D +RYFL+ E   G D  +    LK+RVN DL
Sbjct: 295 WWLNEGQKISKSLGNVICPLTIINEYGLDNVRYFLLSETPIGNDASFSAKRLKERVNCDL 354

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN IGNLV R+V+++ K  +G +P+        +  L     +L++ R  ++ +    AL
Sbjct: 355 ANNIGNLVQRTVTLVHKWCEGKVPSVDMKLMCGDEALPDYQGILEQYRVYVEERRFFEAL 414

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +I + S  + Y   + PW+L K +   A  VL+  +E I+ + +LLQ F+P  + K+ 
Sbjct: 415 KFIIGVSSTANEYIAVKAPWKLFKEDTALAEAVLFKLLEYIKCIGLLLQPFLPVTSEKLL 474

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + V  E R F+ + + L  G +L K   PIF +F
Sbjct: 475 EQIAVPVEKRKFEHIAE-LCTGRVLPKAV-PIFSKF 508


>gi|88808698|ref|ZP_01124208.1| methionine--tRNA ligase [Synechococcus sp. WH 7805]
 gi|88787686|gb|EAR18843.1| methionine--tRNA ligase [Synechococcus sp. WH 7805]
          Length = 525

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 189/512 (36%), Positives = 278/512 (54%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y NA+PH+G  Y  I  D LARF RL+G +V+F TG DEHGQKI + A+  
Sbjct: 13  TYSLTTPLYYVNAKPHLGSVYTTIACDALARFQRLEGEEVVFITGVDEHGQKIQRTAEAQ 72

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++     D+ S  + D+    DI+ D F+RTT  RH    +  +++    G I  G   
Sbjct: 73  SISPADHCDRISALYADLWARWDITNDRFVRTTSPRHRPLVQAFFQRCEAAGHIRTGHQE 132

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + +D    K  D         P++W +EE  FF LS +Q+  +    + P+
Sbjct: 133 GWYCVDCEEFKDDLADAKNPD---CAIHRKPLEWRDEENLFFCLSQFQE-RIESLIADPQ 188

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RR E+ +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT     
Sbjct: 189 FIAPSSRRREIENFVAGGLRDFSISRVNVSWGLPVPGHQGHTFYVWFDALLGYLTALLDD 248

Query: 246 DNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
             P          WP D+HVIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+  +G+K
Sbjct: 249 GGPVDLDRLTDVGWPVDVHVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQK 308

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + K+LGNV+DP  ++E  G DA+R++L+R+I  G+DG + +      VN DLAN IGNL+
Sbjct: 309 MGKALGNVLDPETLLERCGTDAVRWYLLRDIQFGEDGDFQQQRFMDLVNNDLANTIGNLL 368

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +D  +P   A   SD  +     R +  +R+++       A   V+ L  
Sbjct: 369 NRTASMSRKWFDASLPPVSAAVRSDHPLKDTTERTIDRVRQSIPAFAFKDAAEAVLQLAI 428

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           E + Y + Q PW L K   +  +    LY  +E  R + +LLQ  VP L+++I   L  +
Sbjct: 429 EANGYLNEQAPWSLMKQPGHEQKVGDDLYAVLECCRVIGLLLQPLVPGLSSRILAQLDQS 488

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
              + +       +L+PG  L K  +P+  R 
Sbjct: 489 PSEKGWTHALSWGQLEPGASLSKP-EPVMQRL 519


>gi|218295116|ref|ZP_03495952.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244319|gb|EED10844.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 619

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 196/505 (38%), Positives = 294/505 (58%), Gaps = 14/505 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LARFHRLDG    F TGTDEHG+ + +AA+ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARFHRLDGYRTYFLTGTDEHGETVYRAAERAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   ++L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSERFKKAWELLGIAYDDFIRTTEERHKRVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+   E  YFFR+  Y++ LL Y ++HP+ 
Sbjct: 125 LYCVSCERFYTEKELSEG----LCPIHGRPVERRREGNYFFRMEKYREWLLDYLKAHPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   R+EV+S +   + DLS+SR      WGI +P D +++ YVW DAL NY++   Y
Sbjct: 181 IRPEGYRSEVLSMLSEPIGDLSISRPKSRVPWGIPLPWDEEHVTYVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
                     FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 --PDGEKYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  + E  G DALRY+L+REI  G+D    ++ L+ R  +DLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFSLAERYGRDALRYYLLREIPYGQDTPVSEEALRTRYESDLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G +P P    E     L     +   +R  ++    H AL +V++ V  
Sbjct: 359 RTRAMLFRFAEGRVPEPVPGEE-----LEEGVGLPGRLRTLVRELKFHVALEEVMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + ++PWEL K +P  A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKRPWELYKKDPKEAQAVLYRVVEGLRIASILLTPAMPGKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFP 508
           R  ++    L     + +    +FP
Sbjct: 474 RLEEAERWGLALPGPIPEEAPVLFP 498


>gi|296273248|ref|YP_003655879.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296097422|gb|ADG93372.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 648

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 202/516 (39%), Positives = 327/516 (63%), Gaps = 13/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   + +YI+T I Y N   HIGHAY  IIAD+LAR+ RL G    F TGTDEHGQKI +
Sbjct: 1   MNCHKNVYITTPIYYVNDVAHIGHAYTTIIADMLARYSRLTGKKTFFLTGTDEHGQKIEE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G T+K + D+ S  FR + D  DI+YD FIRTT++ H    +  ++K+ +KGDIY
Sbjct: 61  SAKLRGKTSKEYADEVSGKFRALWDDFDITYDKFIRTTDEEHKTGVQFAFEKMFNKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G+Y +  E ++ + ++    + ++      P   ++EE YFF+LSAY+DKLL +Y
Sbjct: 121 KGEYEGYYCVSCETFFTEKQL---IEDEFCPDCGKPTNIVKEESYFFKLSAYEDKLLKWY 177

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTN 237
           E +P+ ILP  ++NE+I+FVKSGL+DLS+SR +FDWG+K+P   ++P+++MYVW+DAL N
Sbjct: 178 EENPDCILPRSKKNEIINFVKSGLRDLSISRTSFDWGVKLPESLNEPKHVMYVWLDALLN 237

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y+T  GY    D    ++WPA++ ++GKDILRFHAIYWPAFL+S +LPLPK + +HG+  
Sbjct: 238 YITALGY--GNDDKNMEYWPANIQLVGKDILRFHAIYWPAFLMSLDLPLPKHIAAHGWWT 295

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKS GNV++P EV +  G+DA RYF++RE+  G+DG + +  L  R+N+DL N 
Sbjct: 296 RDGDKMSKSKGNVVNPKEVADAYGLDAFRYFMLREVPFGQDGDFSQKALMDRINSDLGND 355

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL++R + M  K ++  + +        +  L   + +L  I   + N  ++R L ++
Sbjct: 356 LGNLLNRIIGMSGKYFEYKVTSKDVVKFHQKE-LDEVNEILSGIEGYIYNMQLNRYLEEI 414

Query: 418 ISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +++  ++     +PW ++K+   D A  ++ +   ++ ++A+LL + +P+  +KI   
Sbjct: 415 WKVLTIANKAIGDYEPWTKMKEGKADEAMALVSLITNIMAKVALLLDSVMPEKISKIAQC 474

Query: 477 LFVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
           + +    + +  +  ++ L     + K  + +FPR 
Sbjct: 475 IGLEINTQNYTKIIGNKELLEDVTITK-IEQLFPRI 509


>gi|46199235|ref|YP_004902.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|46196860|gb|AAS81275.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 618

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 198/506 (39%), Positives = 298/506 (58%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++   Y
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
            +        FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 PEGEAYR--TFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G IP P A  E     L+  + + + +R  ++    H AL + ++ V  
Sbjct: 359 RTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAKRLRPLVRELKFHVALEEAMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     + +    +FP+
Sbjct: 474 RLEEAERWGLAEPRPIPEEAPVLFPK 499


>gi|118474589|ref|YP_891971.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118413815|gb|ABK82235.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 632

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 202/508 (39%), Positives = 307/508 (60%), Gaps = 11/508 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  IIAD +AR++RL G D  F TGTDEHGQKI +AA+  
Sbjct: 2   KKFITTPIYYVNDVPHIGHAYTTIIADTMARYYRLVGYDTFFLTGTDEHGQKIEEAAKAH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T K + D+ S  FR + D  +ISYD FIRTT+  H  T + ++ K+ +KGDIYKG Y 
Sbjct: 62  CKTPKEYADEVSAKFRSLWDEFEISYDHFIRTTDDYHKFTAQNVFLKMYEKGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E ++  +++    D ++        + ++EE YFF+LS YQDKLL +YE    
Sbjct: 122 GNYCVSCETFFPQNQL---IDDEFCPDCGKKTRIVKEESYFFKLSDYQDKLLKWYEKG-N 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTT 242
            ILP  ++NEVISFVK GLKDLS++R +F+WG+K+P   ++P+++MYVW+DAL NYL+  
Sbjct: 178 CILPKGKKNEVISFVKGGLKDLSITRTSFEWGVKLPSSLNEPRHVMYVWLDALINYLSAL 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY    D  +  +W   +H++GKDILRFHA+YWPAFL+S  LPLP  V +HG+    G+K
Sbjct: 238 GY--TTDNKRMDYWNDTMHLVGKDILRFHAVYWPAFLMSLELPLPTSVAAHGWWTRDGKK 295

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  V    G++A RYFL+RE+  G+DG + +  L  R+N++L+N +GNL+
Sbjct: 296 MSKSIGNVVDPRAVANAYGLEAFRYFLLREVPFGQDGDFSQKALIDRINSELSNDLGNLL 355

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR V M  K  +  I +          + S     L +  E +     +R L ++  ++S
Sbjct: 356 SRIVGMSSKYSNYEINSQNVTKLYLNELES-AKTHLDQAIEAINEVATNRYLEELWKVLS 414

Query: 423 EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +      +PW L K    D A+ ++ +   ++ ++A+LL   +PK ++KI   L    
Sbjct: 415 LANASVAKYEPWNLIKEGKTDEANALVALVANLLAKVAVLLSPAMPKSSDKIAKTLGFEI 474

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + +  +  + +   +   + +P+F +
Sbjct: 475 NTKTYNDIILKNELLNLKSSSTEPLFTK 502


>gi|308234123|ref|ZP_07664860.1| methionyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943653|ref|ZP_08241118.1| methionine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491622|gb|EGF23396.1| methionine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 542

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 203/536 (37%), Positives = 305/536 (56%), Gaps = 31/536 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              +I+T I Y NA PH+G AY  I+ADV AR+ R+ G +V F TG DEHGQK+A+AA  
Sbjct: 7   PSYFITTPIYYVNAAPHLGTAYCTILADVQARYRRMMGYNVKFLTGMDEHGQKVAEAAAA 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++ + + D  +  F ++   L+ISYDDFIRTTE R +   + LW ++ + G +YKG Y
Sbjct: 67  HNLSPQAWCDSQAPLFTNLWKKLEISYDDFIRTTEPRQYKAVQELWNRMKETGYLYKGSY 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQY------YNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            GWY   +E Y+ + +V K A+ Q             P+Q ++EE YFF+LSA+QDKLL+
Sbjct: 127 DGWYCTPEETYFTETQVSKAAEAQQSEGENLCPDCGRPLQRVKEESYFFKLSAFQDKLLA 186

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            Y+ HPEF+ P  R NEV SFV SGL+DLS+SR +FDWGI +P D +++ YVW DAL NY
Sbjct: 187 LYDEHPEFVQPAFRMNEVRSFVASGLQDLSVSRTSFDWGIPVPFDIKHVTYVWFDALLNY 246

Query: 239 LTTTGYLDNP---DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +T+  Y  +        A  WPA  HV+GKDI+RFH + WPA L++    LP+ VF+HGF
Sbjct: 247 MTSVRYGLDDAASKDEFAFRWPAQCHVVGKDIIRFHCVIWPAMLMALGEALPQSVFAHGF 306

Query: 296 ILHKG------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +  +       EK+SKS GN I P EVI+++GV+  RY+ + ++  G+D     + +++ 
Sbjct: 307 LTVRNPQTGNAEKMSKSRGNAIAPAEVIDKLGVEGYRYYFMTDVTHGEDSAISFERMEQV 366

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            NADLAN  GNLVSR+++M  K +DG  P     + +    +  +  R+ +  ++NM++ 
Sbjct: 367 YNADLANSWGNLVSRTITMCDKYFDGKTPVVDDTWKQQTSPLRDIAQRMFEPYQKNMESM 426

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI---RQLAILLQAF 465
               A   V+ LV   + Y +   PW + K +P RA  + ++ + ++   R  A LL  F
Sbjct: 427 NFAAAKDVVMELVHAANHYIEDMAPWNVAK-DPTRAEELRFILLNLLESIRIAAHLLAPF 485

Query: 466 VPKLANKIFDILFVADENRCFQ-------SLD----QRLKPGFMLHKTFDPIFPRF 510
           +P+ ++++     +  E            SLD         G         +FPR 
Sbjct: 486 MPETSHEVLMREGLDPEAELVGGTMIEGLSLDVICAWGGLAGDQPVVKGAALFPRL 541


>gi|15806450|ref|NP_295156.1| methionyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|25009407|sp|Q9RUF3|SYM_DEIRA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|6459194|gb|AAF11005.1|AE001988_1 methionyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 681

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 195/512 (38%), Positives = 277/512 (54%), Gaps = 12/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + +I+ AI Y N  PHIGH YE I+AD +AR+ RL G DV F  GTDEHG+KI+KAA  
Sbjct: 18  REFFITAAIDYANGTPHIGHVYEKILADAIARYQRLAGRDVTFVMGTDEHGEKISKAAAK 77

Query: 65  AGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            GVT +  VD  S   F+ +   L ISYD FIRTT  +H    + + +++ D GDIY   
Sbjct: 78  GGVTPQELVDDLSERAFQGLWKKLGISYDFFIRTTSAKHKKYVQDVLQRVYDAGDIYFAE 137

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G YS+  E Y  + E+ +G DG         P +   E  YFF +  YQ  LL   + 
Sbjct: 138 YEGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFNMQKYQPWLLETLQQ 197

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +P+ I P   RNEV+  +K  +  LS+SR      WGI++P D  ++ YVW DAL +YLT
Sbjct: 198 NPDLIQPAGYRNEVLEMLKEDIGPLSISRPKARVPWGIELPWDTDHVTYVWFDALLSYLT 257

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
                        K W    HVIGKDIL+ HA++WP  L +A LPL +++  H  IL   
Sbjct: 258 PLVSQGQDASMSGKAW----HVIGKDILKPHAVFWPTMLRAAGLPLYRRLVVHSHILAED 313

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN IDP E++    VDA+RY L+RE + G D  + +  L  R+N+DLAN +G
Sbjct: 314 GRKMGKSLGNAIDPEELVAAWPVDAIRYALLREASLGADSPFGEGVLVSRLNSDLANDLG 373

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+VSMI K   G+IP     T+ +  I +    +  E+   +    I+ A+   +S
Sbjct: 374 NLLSRTVSMIQKYRGGVIPAATEPTDREREIEAAARALPDEVLRLVDELKINMAIDAAMS 433

Query: 420 LVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V +++RY     PW L K      R  TVLY   E +R  ++ L+A +P  A ++ + L
Sbjct: 434 FVRDLNRYIAESTPWTLAKSPETQGRLDTVLYTAAEGLRVASVALEAVIPTKAKELREQL 493

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +  +    Q+    L P     +    +FP+
Sbjct: 494 GLGRQGYPLQAA-WGLTPAGTRVQGGAILFPK 524


>gi|55981267|ref|YP_144564.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296622|sp|P23395|SYM_THET8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55772680|dbj|BAD71121.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 618

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 198/506 (39%), Positives = 297/506 (58%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++   Y
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
            +        FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 PEGEAYR--TFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G IP P A  E     L+  + +   +R  ++    H AL + ++ V  
Sbjct: 359 RTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAGRLRPLVRELKFHVALEEAMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     + +    +FP+
Sbjct: 474 RLEEAERWGLAEPRPIPEEAPVLFPK 499


>gi|225620506|ref|YP_002721763.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225215325|gb|ACN84059.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 651

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 203/520 (39%), Positives = 308/520 (59%), Gaps = 13/520 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K YI+T I YP+   HIGH Y  I  D +AR+ ++ G DV F TGTDEHG+KIA+
Sbjct: 1   MTDK-KFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIAR 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ AG T K +VD      +++   L I Y  +IRTT+  H    + ++K + DKG IY
Sbjct: 60  KAEAAGTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           KG Y G Y + DEA++ + +V K  DG  Y       +++ EEE Y+ +LS Y   L+ Y
Sbjct: 120 KGSYKGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDY 179

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y+ HPEF+ P ER+NE++      GL+DL++SRK   WGI  P D ++ +YVWIDAL NY
Sbjct: 180 YKEHPEFLEPKERQNEMLKNFLLPGLEDLAVSRKGLQWGIPCPVDSEHSIYVWIDALANY 239

Query: 239 LTTTGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T  GY +        K+WPAD+H +GK+I+RFHAI WP  L   ++PLPKKV+ HG++L
Sbjct: 240 ITALGYPEEGQDELYKKYWPADVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVYGHGWVL 299

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKS GNV+DP  +I++ GVDALRYFL+REI  G DG+Y ++   KR+N+DLAN
Sbjct: 300 FDDGKKMSKSSGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLAN 359

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             GNL  R  +M+ K ++ ++P      + + ++ +  +   +   +   + +   H AL
Sbjct: 360 DYGNLWHRITTMLGKYFNNILPDEVESVYGDREKELKKMVLTLDANVESALDSYKFHEAL 419

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + +  ++   ++Y +   PW L K  T  D  + V+Y++ +V   +   LQ F      K
Sbjct: 420 SYIWEVIRMTNKYVEESAPWNLAKDETKKDHLANVMYISFQVYYIVTAYLQIFFIDTPKK 479

Query: 473 IFDILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           +F+ L + D +    +  Q   LK G  + K  +P+F R+
Sbjct: 480 VFNRLGLGD-SVSLDTAKQWGSLKAGIKIEK-GEPLFNRY 517


>gi|87124495|ref|ZP_01080344.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168067|gb|EAQ69325.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 514

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/512 (36%), Positives = 277/512 (54%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G  Y  I  D LARF RL+G  VLF TG DEHGQKI + A   
Sbjct: 2   TYSLTTPLYYVNDRPHLGSTYTTIACDALARFQRLEGETVLFVTGVDEHGQKIQRTAAEQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +   D+ +  + +      IS D F+RTTE RH    +  +++    GDI  G  +
Sbjct: 62  GIEPREHCDRITARYLEAWRQWGISNDRFVRTTEPRHRPLVQAFFQRCEAAGDIRSGRQT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++      A          P++W +EE  FF LS +Q+  +    + P 
Sbjct: 122 GWYCVGCEEFKDE---PAEAKEPCCPLHQKPLEWRDEENLFFCLSHFQE-RIETLINQPG 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RR E+ +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT     
Sbjct: 178 FIAPASRRKEIQNFVAGGLRDFSISRVNVAWGLPVPGHEGHTFYVWFDALLGYLTALLDD 237

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                     A  WPAD+ VIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+  +G+K
Sbjct: 238 GGDVDLNRLGAAGWPADVQVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPEVLLERCGADAVRWYLLRDIQFGDDGDFQQQRFTDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K ++  +P   +   +  ++ +   + ++ +R+ M      +A   ++SL  
Sbjct: 358 NRTASMARKWFNDAVPPIDSTASAGHALQADAEQTIERVRQAMPELHFQQACEAILSLAI 417

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + Y +AQ PW   K   N    ++ LY  +E  R + +LLQ  VP L+ +I D L  A
Sbjct: 418 QANGYLNAQAPWRQMKQPGNEASVASDLYAVLECCRLVGLLLQPLVPDLSQRILDQLGEA 477

Query: 481 DENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  +L+ G  L +   P+  R 
Sbjct: 478 PVASTWKERLIWGKLRAGSPLTQP-QPVMARL 508


>gi|56750417|ref|YP_171118.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81299951|ref|YP_400159.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|56685376|dbj|BAD78598.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168832|gb|ABB57172.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 525

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 190/494 (38%), Positives = 287/494 (58%), Gaps = 7/494 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N  PHIG AY  I AD +ARFHRL G  VL  TG+DEHGQKI + A+  
Sbjct: 4   TFALTTPLYYVNDVPHIGSAYTTIAADAIARFHRLQGDRVLMITGSDEHGQKIQRTAEKN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   +   +     F+D+  +L+I YD F RTT+ RH     + ++++  +GDIY G   
Sbjct: 64  GKPPQEHCNAIVARFQDLWQLLNIRYDRFSRTTDPRHQAIVEVFYRRVEAQGDIYVGRQQ 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E +  + ++ +  D +     +  V+W +EE YFFRLS YQ+ L ++Y ++P+
Sbjct: 124 GWYCVACEEFKEERDLLE--DKRCPIHTNQAVEWRDEENYFFRLSRYQEALEAHYAANPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV+SFV+ GL+D S+SR   +WG  +PD+P++ +YVW DAL  Y+T     
Sbjct: 182 FIQPESRRNEVLSFVERGLQDFSISRVNLEWGFAVPDNPKHTLYVWFDALLGYVTALLDP 241

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           D     +   +++WP +LH+IGKDILRFHA+YWPA LLSA LPLP +VF HGF+   G K
Sbjct: 242 DAEPTLENALSQWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGFLTKDGLK 301

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN +DP ++++  G DA+RY+ ++EI  G+DG Y +      VNADLAN +GNL+
Sbjct: 302 MGKSLGNTLDPFDLVDRFGSDAVRYYFLKEIEFGRDGDYQETRFVNVVNADLANDLGNLL 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  +     IP       +D  +      +   ++          A  Q+++LV 
Sbjct: 362 NRTLSMAKRYCQLQIPLGSTAIAADNPLRQQGEALTDSVKSAYDRLAFSEACGQILALVQ 421

Query: 423 EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +RY D + PW   K     +   +LY  +E +R  A  L   VP ++ +I+  L +  
Sbjct: 422 AGNRYLDQEAPWTRFKQGEQAKVEEILYTVLESVRLAAYWLSPLVPGISQEIYRQLGLVA 481

Query: 482 ENRCFQSLDQRLKP 495
           +     ++ Q+L P
Sbjct: 482 DFND-PAIAQQLDP 494


>gi|269958523|ref|YP_003328310.1| methionyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848352|gb|ACZ48996.1| methionyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 515

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 217/516 (42%), Positives = 319/516 (61%), Gaps = 14/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+  E  Y++T I Y N  PHIGH Y  +I+DV ARF  L G  V FTTGTDEHGQK+  
Sbjct: 1   MRRGECFYVTTPIYYVNDTPHIGHFYTTLISDVAARFRSLSGKQVKFTTGTDEHGQKVEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + FVD+ S +FR++  V   S +DFIRTTE+RH      LW+++     IY
Sbjct: 61  MARARGVPVRQFVDKISGSFRNLVGVSGFSCNDFIRTTEERHKRAVLALWERLRGNNQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+RDE +Y + ++  G            V+W+EE GYFF+LS +Q+ LL +Y
Sbjct: 121 LGHYAGFYSVRDETFYQERDLVDGK-----APTGAEVEWLEEPGYFFKLSEWQESLLKFY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+F++P  + NEVISFV+SGL+DLS+SR  K+  WGI++P D  +I+Y+W+DAL  Y
Sbjct: 176 ADNPKFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCY 235

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L   G+    +G   ++W +D     HV+GKDILRFHA+YWPA L++A LPLPK++ +HG
Sbjct: 236 LALLGF-PETEGEYKRYWGSDDAVSTHVVGKDILRFHAVYWPALLMAAGLPLPKQIVAHG 294

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + L++G+KISKS+GNVIDP  +IE+ G+D  RYFL+ E   G D  +    L +R+N DL
Sbjct: 295 WWLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDL 354

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN  GNLV R+++++ ++  G IP      + +E+ ++    VL +  E M       AL
Sbjct: 355 ANNFGNLVQRTITLVHRECGGKIPGVEGMMKGEEAPIN-YEAVLVQYVEYMAEYRFFEAL 413

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V++L S  + Y   + PW+L K +   A  V++  +E IR + I+LQ FVP  A+KI 
Sbjct: 414 KFVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKIL 473

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D + +  + R F+   +  + G  L  T  P+F + 
Sbjct: 474 DQISLPADRRTFEHFSEFCRGGVSLG-TPTPVFGKL 508


>gi|222475434|ref|YP_002563851.1| methionyl-tRNA synthetase (metS) [Anaplasma marginale str. Florida]
 gi|222419572|gb|ACM49595.1| methionyl-tRNA synthetase (metS) [Anaplasma marginale str. Florida]
          Length = 524

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 216/516 (41%), Positives = 321/516 (62%), Gaps = 14/516 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ E  Y++T I Y N  PHIGH Y  +I+DV ARF  L G  V FTTGTDEHGQK+  
Sbjct: 10  VRQGECFYVTTPIYYVNDTPHIGHFYTTLISDVAARFRSLSGKQVKFTTGTDEHGQKVEN 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + FVD+ S +FR++  V   S +DFIRTTE+RH      LW+++     IY
Sbjct: 70  MARARGVPVRQFVDEISGSFRNLVGVSGFSCNDFIRTTEERHKRAVLALWERLRGNNQIY 129

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+RDE +Y + ++  G            V+W+EE GYFF+LS +Q+ LL +Y
Sbjct: 130 LGHYAGFYSVRDETFYQERDLVDGK-----APTGAEVEWLEEPGYFFKLSEWQESLLKFY 184

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +P+F++P  + NEVISFV+SGL+DLS+SR  K+  WGI++P D  +I+Y+W+DAL  Y
Sbjct: 185 ADNPKFVIPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCY 244

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L   G+    +G   ++W +D     HV+GKDILRFHA+YWPA L++A+LPLPK++ +HG
Sbjct: 245 LALLGF-PETEGEYKRYWGSDGAVSTHVVGKDILRFHAVYWPALLMAADLPLPKQIVAHG 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + L++G+KISKS+GNVIDP  +IE+ G+D  RYFL+ E   G D  +    L +R+N DL
Sbjct: 304 WWLNEGQKISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDL 363

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN  GNLV R+++++ ++  G IP      + +E+ ++    VL +  E M       AL
Sbjct: 364 ANNFGNLVQRTITLVHRECGGKIPEVEGMMQGEEAPIN-YKAVLVQYVEYMAEYRFFEAL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V++L S  + Y   + PW+L K +   A  V++  +E IR + I+LQ FVP  A+KI 
Sbjct: 423 KFVMNLSSVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKIL 482

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D + +  + R F+   +  + G  L  T  P+F + 
Sbjct: 483 DQISLPADRRSFEHFSEFCRGGVSLG-TPTPVFGKL 517


>gi|242036539|ref|XP_002465664.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
 gi|241919518|gb|EER92662.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
          Length = 597

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/516 (35%), Positives = 282/516 (54%), Gaps = 14/516 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++T + Y NA PH+G AY  I AD +ARF RL   +V+F TGTDEHG+KIA +A+ 
Sbjct: 59  EPYVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLQEKNVIFITGTDEHGEKIAASAEA 118

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           +G   K   D  S +++ +   LDI YD FIRTT+ +H       + ++ + GDIY+  Y
Sbjct: 119 SGRNPKEHCDAISSSYKTLWADLDIEYDKFIRTTDSKHEAVVNEFYSRVLNSGDIYRADY 178

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ KL      +P
Sbjct: 179 EGLYCVSCEEYKDEKEL---LENNCCPVHLKPCVERKEDNYFFALSKYQHKLEELLTRNP 235

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---T 241
           +F+ P  R NEV  ++KSGL+D S+SR + +WGI +P+D +  +YVW DAL  Y++    
Sbjct: 236 DFVRPSYRLNEVQGWIKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISALLD 295

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G   +   +    WPA LH+IGKDILRFHA+YWPA L+SA L +P  VF HGF+   G 
Sbjct: 296 DGEQASLQQAVDHGWPASLHLIGKDILRFHAVYWPAMLMSAGLTVPDTVFGHGFLTKDGM 355

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+ KSLGN ++P +++E  G DA+RYF +RE+  G DG Y ++     VNA LAN IGNL
Sbjct: 356 KMGKSLGNTLEPKDLVERFGADAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNL 415

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R++ ++ K+    +                   ++ + + + +N L+  A   V+ + 
Sbjct: 416 LNRTLGLLKKNCKSKLAFDSIAAADGGLFRDNIENLVDKAKHHYENLLLSSACETVLEIG 475

Query: 422 SEVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  + Y D Q PW   K    + ++A+  L + +E +R +AI L    P L+ +I+  L 
Sbjct: 476 NLGNLYIDEQAPWSCFKQGGESAEKAAKDLVLILETMRIIAIALSPITPSLSLRIYTQLG 535

Query: 479 VADEN----RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++     R   +    LK G  +     P+F R 
Sbjct: 536 FTEDQFRLLRWEDTKWGGLKAG-QVMSEPKPVFARI 570


>gi|223935818|ref|ZP_03627733.1| methionyl-tRNA synthetase [bacterium Ellin514]
 gi|223895419|gb|EEF61865.1| methionyl-tRNA synthetase [bacterium Ellin514]
          Length = 517

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 198/517 (38%), Positives = 304/517 (58%), Gaps = 24/517 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI Y N + H+GHAYEM+IADV+AR  R  G +V F TG DEHGQK+ +AAQ  G
Sbjct: 5   FYITTAIYYVNGEAHLGHAYEMVIADVIARSRRSLGTEVFFLTGLDEHGQKVQQAAQFKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ + + D+ S  +R MA  L+++ DDF+RTTE RH +  + +  K++++G  YK  Y G
Sbjct: 65  LSPQQYCDELSLIWRTMAQKLELTIDDFVRTTEPRHKEVVQAILSKLNNEGHFYKAAYKG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YS R+E +  + +     +   + A +  V  ++EE Y+F+L  +Q  L+ Y ES P F
Sbjct: 125 YYSTREETFLTEKDRLPDGN---FPASYGEVTELQEENYYFKLKDHQQWLIDYIESTPSF 181

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           I P  RRNEV+ F+K+  L+DL ++R     +WGI +P D  ++ YVW DAL NY++   
Sbjct: 182 IQPEYRRNEVLGFLKNNTLEDLCITRPINRLNWGIPVPFDTNFVTYVWFDALVNYISIPA 241

Query: 244 YLDNPDGSKAKF--------WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
              +P    A          WPAD HVIGKDIL+FH++YWP  L +  LPLP+++  HG+
Sbjct: 242 AHGDPVVLSALGRTGQGLPLWPADTHVIGKDILKFHSVYWPIMLKAMGLPLPRQLLVHGW 301

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SK+ GNV+DP+ V+ E G+DA R+++VRE+A G DG +   G + R  A+LA
Sbjct: 302 WQKDGQKLSKTTGNVVDPLAVVNEWGIDAFRFYVVRELAIGPDGNWTDGGFQARYQAELA 361

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG+GNLV+RS+SM+ +  +G++P         + +     +V+ E R +++   +  AL 
Sbjct: 362 NGLGNLVNRSLSMLKRYRNGIVPERS------DELAPEAGKVIAETRAHLEQNGLQAALL 415

Query: 416 QVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  LV+  ++Y D   P+ L K      R   VLY   E  R LAILL  F+P  + +I
Sbjct: 416 SIWELVNRANQYVDQTAPFRLAKDPAQSKRLDEVLYNLAESCRILAILLAPFIPGTSERI 475

Query: 474 FDILFVADENRCFQ-SLDQRLKPGFMLHKTFDPIFPR 509
           ++ L ++        +    L  G  + +    +FPR
Sbjct: 476 YNQLGLSSAPEGISTAAWGGLAAGHTIGEPA-ALFPR 511


>gi|253827052|ref|ZP_04869937.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510458|gb|EES89117.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 654

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 319/514 (62%), Gaps = 14/514 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  IIAD LAR+HR+   +V F TGTDEHGQKI ++A+  
Sbjct: 8   KFYITTPIYYVNDVPHIGHAYTTIIADTLARYHRIQNEEVWFLTGTDEHGQKIQQSAEKN 67

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               K +VD+ S  F+++ D   ISYD FIRTT+  H ++ R ++ K+  KGDIYKG Y 
Sbjct: 68  NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYE 127

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++    +      + N +   +EE YFF+LSAY+D+LL + ES+P+
Sbjct: 128 GNYCISCESFFAKSQLINHKNCPDCGKETNLL---KEESYFFKLSAYEDRLLQWIESNPD 184

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDALTNYLT 240
            ILP  RRNEVI+F+K GL+DLS++R +FDWGIK+P     +D +++MYVW+DAL NYL+
Sbjct: 185 CILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDALVNYLS 244

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +N   +K +FWPA+ H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+   +G
Sbjct: 245 ALGY-ENSKENKMEFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGWWTKEG 303

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV++P EV++  G+D  RYF++RE+  G+DG + +  L +R NADL N +GN
Sbjct: 304 AKMSKSIGNVVNPKEVVDLYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLGNDLGN 363

Query: 361 LVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R + M  K ++        ++ +S E+  +    +L  ++  M    IHR L ++  
Sbjct: 364 LLNRLLGMGAKYFNNSLQVDLKSYKQSFEAESTTIKTILGSLKNFMNEVQIHRYLEELWK 423

Query: 420 LVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + S  +     ++PW+L K   +   + +L     ++ + A+ L   +P  A KI  +  
Sbjct: 424 IFSLGNGIIAKKEPWKLIKEQKEQEVAELLVFIANLLIKGALCLYPCMPDSAKKILSVFG 483

Query: 479 VADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
           +    + + +  LD ++     L+     +FP+ 
Sbjct: 484 LEASAQNYLNFILDDKILSQVSLN-PIPALFPKI 516


>gi|269986151|gb|EEZ92464.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 483

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 200/506 (39%), Positives = 299/506 (59%), Gaps = 25/506 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI+T I Y N +PHIGHAY  IIADV AR+HRL+   V F TGTDEHG KI KAA  
Sbjct: 2   EKFYITTPIYYVNDKPHIGHAYTTIIADVFARWHRLNNEKVFFLTGTDEHGGKIEKAANE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              T K  VD+ S+ ++   + L+ISYD FIRTT+K H +T +   KK+ +KGDIYKG Y
Sbjct: 62  KNKTPKELVDETSQKYKTTWEKLNISYDKFIRTTDKSHEETVKRFIKKVFEKGDIYKGEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+Y L DE Y  + E+     G         VQ ++EE YFF+LS Y+D++++      
Sbjct: 122 EGFYCLPDERYITESELV----GGKCPDCGRDVQKIKEEAYFFKLSKYKDQIINLINKG- 176

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             ILP +  NE+++ +K  LKDL +SRK+  WGIK P D  + +YVW DAL NYL+   +
Sbjct: 177 -LILPEKNANEILNRLKGELKDLDISRKSVSWGIKFPLDESHSVYVWFDALLNYLSALNW 235

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                    +FWPAD+H++GK+I+ FH++ WPA L+SA+LPLPK + +HG+    G+K+S
Sbjct: 236 --PDGSEFKEFWPADIHLVGKEIVWFHSVIWPAMLMSADLPLPKNILAHGWWTVDGKKMS 293

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+DPIE+ ++   DA RYFL+RE    +DG + +  LK+R+N +L + + NLV+R
Sbjct: 294 KSIGNVVDPIEIADKYSADAFRYFLLREKPTWEDGDFSEAALKERINGELMSNLSNLVAR 353

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +++  K    +   P         I     +  +EI EN + + ++ AL  +   + ++
Sbjct: 354 VLTLAEKFEGKIEGKP--------EIEDFIRK--EEIIENFEKKDLYSALNLIFEGIRKI 403

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           ++Y + ++PW+L+  N    + VLY ++E IR   I L+ F+P  A KI   L V  +  
Sbjct: 404 NKYVNDKEPWKLEGKN---LANVLYNSLEAIRIATIFLKPFMPSTAEKIEKKLGVNGQLL 460

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
                D   +      +  + +F + 
Sbjct: 461 S----DAFFREFSTKVERGENLFNKI 482


>gi|68543|pir||SYTWMT methionine-tRNA ligase (EC 6.1.1.10) - Thermus aquaticus
 gi|155136|gb|AAA27510.1| transfer RNA-Met synthetase [Thermus thermophilus]
          Length = 616

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 198/506 (39%), Positives = 297/506 (58%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++   Y
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
            +        FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 PEGEAYR--TFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G IP P A  E     L+  + +   +R  ++    H AL + ++ V  
Sbjct: 359 RTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAGRLRPLVRELKFHVALEEAMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     + +    +FP+
Sbjct: 474 RLEEAERWGLAEPRPIPEEAPVLFPK 499


>gi|148906837|gb|ABR16564.1| unknown [Picea sitchensis]
          Length = 704

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 194/515 (37%), Positives = 281/515 (54%), Gaps = 14/515 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA AA   
Sbjct: 149 PFVLTTPLYYVNAPPHMGSAYTTIAADAMARFQRLQGKKVVFITGTDEHGEKIAMAAAAK 208

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K   D+ + +++ +   LDI+YD FIRTT   H    +  + +I  KGDIY   Y 
Sbjct: 209 GQNPKDHCDRIACDYQALWKDLDITYDKFIRTTNPCHEAIVKEFYTRIIAKGDIYHADYE 268

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E Y +  E+    + +       P +  +E+ YFF LS YQ  L     ++P 
Sbjct: 269 GLYCVNCEEYKDGKELL---EDECCPIHRKPCELRKEDNYFFSLSKYQKPLEELLTANPN 325

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ P  R NEV S+VK GL+D S+SR T +WGI +P+D +  +YVW+DA+  Y++     
Sbjct: 326 FVQPPYRLNEVQSWVKGGLRDFSISRATVEWGIPVPNDSKQTIYVWVDAMLGYVSALLKD 385

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +N        A  WPA LH+IGKDILRFHA+YWPA L+SANL LP  VF HGF+   G K
Sbjct: 386 ENEPTLDNAVAGGWPASLHLIGKDILRFHAVYWPAMLMSANLKLPATVFGHGFLTKDGLK 445

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV++P ++I+  G DA+RYF +REI  G DG Y ++     VNA LAN IGNL+
Sbjct: 446 MGKSLGNVLEPKDLIDRFGCDAVRYFFLREIEFGNDGDYSEERFTNIVNAHLANTIGNLL 505

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++ ++ +     +                   ++++ R +  N   + A   VI + +
Sbjct: 506 NRTLGLLKRYCQSTLTIDSNSAAEYNPFKEHVMELVEKARLDYMNLSFNSACEAVIDIAN 565

Query: 423 EVDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             + Y D   PW L K   ++ + A+  L V +E +R  A+ L   VP+L  KI+  L  
Sbjct: 566 AGNVYLDEHTPWSLFKKGDSSAEEAAKDLVVILEAMRITAVALSPIVPRLCRKIYLQLGY 625

Query: 480 AD---ENRCF-QSLDQRLKPGFMLHKTFDPIFPRF 510
                E+  +  +    LK G  +    +P+F R 
Sbjct: 626 PKNDFESISWGDTAWGALKAG-QVMAEPEPVFKRI 659


>gi|222823730|ref|YP_002575304.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538952|gb|ACM64053.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 629

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 204/507 (40%), Positives = 305/507 (60%), Gaps = 11/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N   HIGHAY  IIAD LARF+RL G    F TGTDEHGQKI +AA     
Sbjct: 3   YITTPIYYVNDVAHIGHAYTTIIADTLARFYRLQGEKTFFLTGTDEHGQKIEQAASAKNF 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K + D+ S  F+ + D  +ISYD FIRTT++ H  + +  +KK+ DKGDIYKG Y G+
Sbjct: 63  TPKEYADEISTKFKKLWDEFEISYDYFIRTTDENHKLSVQKAFKKMFDKGDIYKGTYEGF 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+Y+   ++    +  +        Q ++EE YFF+LS YQD++L +Y+     I
Sbjct: 123 YCVSCESYFTQTQL---INECHCPDCGKKTQLLKEESYFFKLSKYQDQILKWYKEKEP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  + NE+I+FV+SGLKDLS++R +F+WGIK+P   +D ++++YVW+DAL NY++  G+
Sbjct: 179 LPKNKANELINFVESGLKDLSITRTSFEWGIKLPKELNDDKHVVYVWLDALMNYVSALGW 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               D +   FWPA +H +GKDILRFHA+YWPAFL+S +LPLPK + +HG+    GEK+S
Sbjct: 239 --GNDEANMDFWPAHIHFVGKDILRFHAVYWPAFLMSLDLPLPKFIAAHGWWTKDGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV +  G++A RYFL+RE+  G DG + +  L  R+NA+L+N +GNL++R
Sbjct: 297 KSKGNVVAPKEVADTFGLEAFRYFLLREVPFGNDGDFSQKALIARINAELSNELGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K    +I         ++  L+ C   L      ++N   +R L ++   +S  
Sbjct: 357 IIGMSAKYSQNIIDCKDVNLYFNQE-LNECKEYLDNAINALENIQPNRYLEELFKALSLA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K +   +A+ ++ +   ++ ++AILL A +P  A KI   L     N
Sbjct: 416 NLSISKYEPWNLIKNDQMQKANALVALCANILAKVAILLSAAMPNTALKIAKALNFEISN 475

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +Q L    +   +     + +FP+ 
Sbjct: 476 ENYQKLILNNQLCDLKSSPCEALFPKI 502


>gi|298245336|ref|ZP_06969142.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552817|gb|EFH86682.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 537

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 207/512 (40%), Positives = 305/512 (59%), Gaps = 11/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+TAI YPNA PH+GHA E +IAD+ AR+HRL G D  F+TG DE+   + +AA+ A
Sbjct: 25  RFYITTAIDYPNAAPHVGHALEKVIADIQARYHRLLGDDTFFSTGLDENSLHVLRAAREA 84

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    +V      FR+    LDISYD +IRTTE+ H      ++++   +GDIY+  YS
Sbjct: 85  NVEPHAWVAALEARFREEWRKLDISYDRWIRTTEEAHRKVAEEIFRRAWARGDIYRTTYS 144

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY      +Y D+++  G    + +      +W+ EE YFF LS Y+D+L +Y E HP+
Sbjct: 145 GWYCPNCNNFYKDEDLRDGHCPDHPSISP---EWLNEENYFFALSRYEDQLRTYIEEHPD 201

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFD----WGIKIPDDPQYIMYVWIDALTNYLTT 241
           FI+P  RR EV+  +K GL+D S+SR+       WGI +P+DPQ ++YVW DALTNYLTT
Sbjct: 202 FIVPTSRRAEVLGVIKQGLRDFSISRQVRPGLENWGIPVPEDPQQVLYVWFDALTNYLTT 261

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+L + +   A++WPAD HVIGKDI RFH +YWPA LLSA LPLP++V  HGFI  +G 
Sbjct: 262 IGFLQDEER-FARYWPADAHVIGKDITRFHCLYWPAILLSAGLPLPRQVAVHGFITLEGR 320

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           + SKS GNVI P  +++ VG DALRY+L+R ++   DG + ++GL +  N +L N +GNL
Sbjct: 321 RFSKSSGNVIAPSALVDVVGSDALRYYLLRNLSLTADGNFTREGLLRAYNDELGNDLGNL 380

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R V +I +   G IP PG+ T  +E + ++ ++    +   ++     RAL +    V
Sbjct: 381 LQRLVVLIKRFRGGTIPRPGSVTPLEEEVQALVAQGGALVGRALEEWEPGRALEEAWRCV 440

Query: 422 SEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
             V+ Y +  +PW+L K     +R  TVLY   E +R L++ L  F+P  + ++ + L +
Sbjct: 441 RRVNLYIEQSEPWKLAKQPGQEERLDTVLYTAAEALRLLSLWLAPFIPATSRRLREQLGL 500

Query: 480 AD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               N  +++                 +FPR 
Sbjct: 501 EPLANGAWRTEGHWGACELTQVVPGGVLFPRL 532


>gi|32266841|ref|NP_860873.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|32262893|gb|AAP77939.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 643

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 193/515 (37%), Positives = 307/515 (59%), Gaps = 16/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ I++ I Y N  PHIGHAY  I+ D+L +F++L G DV F TGTDEHGQKI ++AQ 
Sbjct: 3   QKILITSPIYYVNDIPHIGHAYTTILCDMLKKFYQLQGNDVKFLTGTDEHGQKIEQSAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  + + D+ S  F+++ +  +I YD F+RTT+  H  + +  ++ +  KGDIYKG Y
Sbjct: 63  HSLDPQSYADKISIRFKELWNEFNIDYDIFVRTTDNMHCLSVQKAFEIMYAKGDIYKGSY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E ++   ++    +         P Q ++EE YFF LS YQ+KLL +Y+SHP
Sbjct: 123 EGHYCISCETFFTQKQL---NENNACPDCGKPTQIVQEESYFFALSKYQNKLLDWYKSHP 179

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP------QYIMYVWIDALTNY 238
           +FILP  R+NE+I FV  GL DLS++R +F+WG+ +P +P      +++MYVW+DAL +Y
Sbjct: 180 DFILPQFRQNEIIKFVNEGLNDLSITRTSFEWGVPLPHNPVRKDDKKHVMYVWLDALLSY 239

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           L+  GY    D +K  +W   +H +GKDILRFHA+YW AFL+S  LPLP+ +++HG+   
Sbjct: 240 LSPLGY--LSDSAKMPYWENAIHFVGKDILRFHAVYWLAFLMSLELPLPQHIYAHGWWTK 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS+GNVI+P EV    G+++LRYFL+RE+  G+DG + +    +R+NA+L N +
Sbjct: 298 DGTKMSKSIGNVINPKEVANAYGIESLRYFLLREMPFGQDGDFSQKAFIERINAELGNDV 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R + M  K +  +              L+    ++ + +E M +   HR + ++ 
Sbjct: 358 GNLLNRLIGMSEKYF-ALQVDSVQVEMFFAPELNELKNIIAQAQEKMLSMQPHRYVEELW 416

Query: 419 SLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +      +PW L K++  D+A  +L +   ++ Q ++LL   +P+ A KI + L
Sbjct: 417 KAFGLGNSVITKYEPWNLIKSHQTDKAMALLGLIANILAQSSLLLYPIMPQSACKIANTL 476

Query: 478 FVADENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
                 + ++ L    +L   F L+K   P+FPR 
Sbjct: 477 NFDINAQNYEKLIKQGQLLASFKLNK-IPPLFPRI 510


>gi|320352452|ref|YP_004193791.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320120954|gb|ADW16500.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 648

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 201/514 (39%), Positives = 288/514 (56%), Gaps = 18/514 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y NA PH+GHAY  I+ D  +RF RL G  V F TGTDEHG+KIA+AA  AG 
Sbjct: 4   YVTTPIYYVNALPHLGHAYTTIVTDTYSRFRRLCGDTVRFQTGTDEHGEKIAEAAAKAGE 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + + +VD+ S  F+D   VL I  D  IRTT+  H  T + + +++   GDIY   YSG 
Sbjct: 64  SPREYVDRISAAFKDTWPVLAIQPDKIIRTTDADHVRTVQAILQQVHASGDIYFSEYSGL 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E +  + E+    DG+  +    P + + E+ YFFR+S YQD L+ + + HP+FI
Sbjct: 124 YCKGCERFLTEKEL---VDGKCPDHLVEP-KAITEQNYFFRMSKYQDWLIEHIQRHPDFI 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            P   RNEV+SF+   L+DL +SR T    WGI +P D  ++ YVW DAL NYLT  GY 
Sbjct: 180 TPERYRNEVLSFLSEPLEDLCISRPTSRLTWGIPLPFDQNFVTYVWFDALINYLTGIGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                  A +W    HVI KDIL+ HAIYWP  L +  L   +++  HG+      K+SK
Sbjct: 239 -PDSPEFAMYWAEAEHVIAKDILKPHAIYWPTMLRAMGLEPYRRLHVHGYWNVDATKMSK 297

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNV+ P E++E  GVD +RYF++RE++ G D  +  D +  R NADLAN +GNL SRS
Sbjct: 298 SLGNVVRPRELVETYGVDTVRYFVLREMSFGLDSSFSSDAILARHNADLANDLGNLFSRS 357

Query: 366 VSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           ++MI K   G +P P     F   D  ++S  + +    +ENM     H+AL  +  ++ 
Sbjct: 358 LTMIDKYAAGRVPEPETAALFAPEDRELMSAIAAMFDHYQENMAAFTFHKALQAIWEVIG 417

Query: 423 EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++RY     PWEL K      R  TVL    E + ++A++L   +P  A+++   L + 
Sbjct: 418 LLNRYIVTHAPWELAKQPDQAGRLRTVLAFLAESLWKIALVLGPIMPDTASRMAAALGMG 477

Query: 481 DENRCFQSLDQRLKPGFMLH----KTFDPIFPRF 510
            E     +LD+  K G++      +    +FPR 
Sbjct: 478 TEFASV-TLDEARKWGYIPVGTAIEKGTQLFPRI 510


>gi|113953658|ref|YP_730540.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881009|gb|ABI45967.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 514

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/511 (35%), Positives = 269/511 (52%), Gaps = 12/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y N +PH+G  Y  I  D LARF RL+G +V+F TG DEHGQKI + A + G
Sbjct: 3   YTLTTPLYYVNDKPHLGSTYTTIACDALARFQRLEGHEVVFVTGVDEHGQKIQRTAADQG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++     ++ + ++    +  DIS D F+RTT  RH    +  +++  + GDI  G  +G
Sbjct: 63  ISPIDHCNRITASYEKAWNEWDISNDRFVRTTSPRHLPLVQQFFQRCEEAGDIRSGRQTG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E + +D            +    P++W +EE  FF LS YQ+  +       +F
Sbjct: 123 WYCVGCEEFKDDPAEAVNP---TCSIHQKPLEWRDEENLFFCLSHYQE-QIEAIIKQSDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RRNE+ +FV  GL+D S+SR   DWG+ +P    +  YVW DAL  YLT      
Sbjct: 179 IAPASRRNEIQNFVAGGLRDFSISRVNVDWGLPVPGHQGHTFYVWFDALLGYLTALLDDG 238

Query: 247 NPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                       WPA+ HVIGKDILRFHA+YWPA L+SA LPLPKKVF HGF+  +G+K+
Sbjct: 239 GTIDLDRLNTIGWPANQHVIGKDILRFHAVYWPAMLMSAGLPLPKKVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KS+GNV+DP  ++   G DA+R++L+R+I  G DG + +      VN DLAN IGNL++
Sbjct: 299 GKSIGNVLDPELLLNRCGTDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K ++   PT  +      ++       +   RE M +    +A   ++ L  +
Sbjct: 359 RTSSMSRKWFNESTPTVASKDSDQHALRQAAETAIASAREAMPSMAFQKAAESILQLAIQ 418

Query: 424 VDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y + Q PW   K     A   +  Y  +E  R +  LL+  VP L+ +I   L    
Sbjct: 419 ANGYLNDQAPWSKMKKGGQEAQVAVDLYGVLESARLVGWLLKPLVPDLSERILSQLNQPS 478

Query: 482 ENRCF--QSLDQRLKPGFMLHKTFDPIFPRF 510
               +  Q +  RL+ G  L +   P+  R 
Sbjct: 479 TTANWSGQLVWGRLESGHPLPQP-QPVMQRL 508


>gi|320334699|ref|YP_004171410.1| methionyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755988|gb|ADV67745.1| Methionyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 657

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 202/515 (39%), Positives = 286/515 (55%), Gaps = 16/515 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER++ +I+TAI Y N  PHIGH +E I+ D +AR+HRL G DV F TGTDEHG+KIAK
Sbjct: 1   MSERKEFFITTAIDYANGAPHIGHVFEKILTDAIARYHRLAGYDVTFLTGTDEHGEKIAK 60

Query: 61  AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA  AG T + FVD  S   F+ + D L I YDDFIRTTE RH    + + +++ D GDI
Sbjct: 61  AAAKAGQTPQRFVDDLSLGAFKGLWDRLGIGYDDFIRTTEPRHKAYVQDVLQRVYDAGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y   Y G YS+  E Y  + E+  G           P +   E  YFFR+  YQ  L+ +
Sbjct: 121 YYAEYEGLYSVGAERYVTEKELVNG----VLPGDSAPPEVRREANYFFRMEKYQAWLVQH 176

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
            + HPEFI P   RNEV+  ++  + DLS+SR      WGI++P DP ++ YVW DAL N
Sbjct: 177 LQEHPEFIQPSGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLN 236

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y +           KA  +    HVIGKDIL+ HA++WP  L +A   L +++  H  IL
Sbjct: 237 YQSAPASKG-----KAALFRHAWHVIGKDILKPHAVFWPTMLKAAGSDLYERLIVHAHIL 291

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+ KSLGN IDP  +++  G D +RY L+RE   G D  Y +  L  R+N+DLAN
Sbjct: 292 AEDGRKMGKSLGNAIDPGALVDAYGADTVRYTLLRETTLGADSPYGEGILVSRLNSDLAN 351

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+VSM+ K  +G++P PG   E +  I +    + + +   +++  I+ AL  
Sbjct: 352 DLGNLLSRTVSMVQKYREGVVPAPGPRAEREAGIEASARALPERVLGLVRDLKINMALEA 411

Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               V +++RY     PW L K     +R +TVLY  VE +R  ++LL+A +P  A ++ 
Sbjct: 412 AFEFVRDLNRYIAESAPWALAKDPAQAERLNTVLYTAVEGLRVASVLLEAAIPTKARELR 471

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             L +       +     L P          +FP+
Sbjct: 472 AQLGLGGLAYRLEGA-WGLTPAGTRVAGGAVLFPK 505


>gi|218192309|gb|EEC74736.1| hypothetical protein OsI_10474 [Oryza sativa Indica Group]
          Length = 602

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 184/514 (35%), Positives = 285/514 (55%), Gaps = 14/514 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y NA PH+G AY  I AD +ARF RL    V+F TGTDEHG+KIA +A+  G
Sbjct: 63  YVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEACG 122

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K   D  S +++ +   LDI YD FIRTT+++H       + ++ D GDIY+  Y G
Sbjct: 123 RNPKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADYEG 182

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E Y ++ E+    + +       P    +E+ YFF LS YQ +L      +P F
Sbjct: 183 LYCVSCEEYKDEKELG---ENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNF 239

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTG 243
           + P  R NEV  +VKSGL+D S+SR + +WGI +P+D +  +YVW DAL  Y++     G
Sbjct: 240 VRPSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISALLDDG 299

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              +   +  + WPA LH+IGKDILRFHA+YWPA L+SA + +P  VF HGF+   G K+
Sbjct: 300 EKASLQQAVERGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGMKM 359

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGN ++P +++   GVDA+RYF +RE+  G DG Y ++     VNA LAN IGNL++
Sbjct: 360 GKSLGNTLEPKDLVNRFGVDAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNLLN 419

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ ++ K+    +           S+      ++ + ++  +N L+  A   ++ + + 
Sbjct: 420 RTLGLLKKNCKSTLAFDSIAAADGISLKDNVENLVDKAKDQFENLLLSSACETLMEIGNL 479

Query: 424 VDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + Y D Q PW   K    + ++A+  L + +E +R +AI L    P L+ +I+  L   
Sbjct: 480 GNLYIDEQAPWSCFKQGGESAEKAAKDLVIILETMRIIAIALSPITPSLSLRIYTQLGFT 539

Query: 481 DEN----RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++     R   +    LK G ++ +   P+F R 
Sbjct: 540 EDQFRTLRWEDTKWGGLKAGQVMMEP-KPVFARI 572


>gi|224417704|ref|ZP_03655710.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 607

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 207/514 (40%), Positives = 319/514 (62%), Gaps = 14/514 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  IIAD LAR+HR+   +V F TGTDEHGQKI ++A+  
Sbjct: 4   KFYITTPIYYVNDVPHIGHAYTTIIADTLARYHRIQNEEVWFLTGTDEHGQKIQQSAEKN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               K +VD+ S  F+++ D   ISYD FIRTT+  H ++ R ++ K+  KGDIYKG Y 
Sbjct: 64  NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++    +      + N +   +EE YFF+LSAY+D+LL + ES+P+
Sbjct: 124 GNYCISCESFFAKSQLINHKNCPDCGKETNLL---KEESYFFKLSAYEDRLLQWIESNPD 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDALTNYLT 240
            ILP  RRNEVI+F+K GL+DLS++R +FDWGIK+P     +D +++MYVW+DAL NYL+
Sbjct: 181 CILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDALVNYLS 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY +N   +K +FWPA+ H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+   +G
Sbjct: 241 ALGY-ENSKENKMEFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGWWTKEG 299

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GNV++P EV++  G+D  RYF++RE+  G+DG + +  L +R NADL N +GN
Sbjct: 300 AKMSKSIGNVVNPKEVVDLYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLGNDLGN 359

Query: 361 LVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R + M  K ++        ++ +S E+  +    +L  ++  M    IHR L ++  
Sbjct: 360 LLNRLLGMGAKYFNNSLQVDLKSYKQSFEAESTTIKTILGSLKNFMNEVQIHRYLEELWK 419

Query: 420 LVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + S  +     ++PW+L K   +   + +L     ++ + A+ L   +P  A KI  +  
Sbjct: 420 IFSLGNGIIAKKEPWKLIKEQKEQEVAELLVFIANLLIKGALCLYPCMPDSAKKILSVFG 479

Query: 479 VADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
           +    + + +  LD ++     L+     +FP+ 
Sbjct: 480 LEASAQNYLNFILDDKILSQVSLN-PIPALFPKI 512


>gi|115451471|ref|NP_001049336.1| Os03g0209600 [Oryza sativa Japonica Group]
 gi|108706784|gb|ABF94579.1| Methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113547807|dbj|BAF11250.1| Os03g0209600 [Oryza sativa Japonica Group]
 gi|215697057|dbj|BAG91051.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222624429|gb|EEE58561.1| hypothetical protein OsJ_09866 [Oryza sativa Japonica Group]
          Length = 602

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 183/514 (35%), Positives = 285/514 (55%), Gaps = 14/514 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y NA PH+G AY  I AD +ARF RL    V+F TGTDEHG+KIA +A+  G
Sbjct: 63  YVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLDKRVVFITGTDEHGEKIATSAEACG 122

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K   D  S +++ +   LDI YD FIRTT+++H       + ++ D GDIY+  Y G
Sbjct: 123 RNPKDHCDTISNSYKMLWADLDIEYDKFIRTTDRKHEAVVNDFYSRVLDSGDIYRADYEG 182

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E Y ++ E+    + +       P    +E+ YFF LS YQ +L      +P F
Sbjct: 183 LYCVSCEEYKDEKELG---ENKCCPVHLKPCVPRKEDNYFFALSKYQHQLEDLLTKNPNF 239

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTG 243
           + P  R NEV  +VKSGL+D S+SR + +WGI +P+D +  +YVW DAL  Y++     G
Sbjct: 240 VRPSHRLNEVQGWVKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISALLDDG 299

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              +   +  + WPA LH+IGKDILRFHA+YWPA L+SA + +P  VF HGF+   G K+
Sbjct: 300 EKASLQQAVERGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGMKM 359

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGN ++P +++   GVD++RYF +RE+  G DG Y ++     VNA LAN IGNL++
Sbjct: 360 GKSLGNTLEPKDLVNRFGVDSVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNLLN 419

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ ++ K+    +           S+      ++ + ++  +N L+  A   ++ + + 
Sbjct: 420 RTLGLLKKNCKSTLAFDSIAAADGISLKDNVENLVDKAKDQFENLLLSSACETLMEIGNL 479

Query: 424 VDRYFDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + Y D Q PW   K    + ++A+  L + +E +R +AI L    P L+ +I+  L   
Sbjct: 480 GNLYIDEQAPWSCFKQGGESAEKAAKDLVIILETMRIIAIALSPITPSLSLRIYTQLGFT 539

Query: 481 DEN----RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++     R   +    LK G ++ +   P+F R 
Sbjct: 540 EDQFRTLRWEDTKWGGLKAGQVMMEP-KPVFARI 572


>gi|254797222|ref|YP_003082063.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590469|gb|ACT69831.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 521

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 218/507 (42%), Positives = 315/507 (62%), Gaps = 14/507 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T + Y N  PHIGHAY  +IADVL R  RL G +V FTTGTDEHGQK+   A+  
Sbjct: 20  RYYVTTPVYYVNDNPHIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTAKKH 79

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G     FVD  SR FRD+   +   + DFIRTTE RH +  + LW  IS    I  G YS
Sbjct: 80  GKCEIDFVDHVSRRFRDLCVAMHYEFSDFIRTTETRHKEAVQTLWSTISKNNSISLGEYS 139

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS RDEA+Y + E+  G           PV W +E  YFF+LS + + L   Y  +P 
Sbjct: 140 GWYSERDEAFYTEAELQNGL-----APTGAPVSWTKEACYFFKLSQFSEPLKKLYAENPT 194

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R NE+++F+ +G+ DLS+SR    WGI +PDDP + +YVW+DALTNY+++ GY 
Sbjct: 195 FIQPKSRFNEMLAFLNTGMHDLSISRTRVKWGINVPDDPAHTVYVWLDALTNYVSSIGYP 254

Query: 246 DNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +    S    +  +   +H+IGKDILRFH+IYWPAFL++ANL  P  + +HG+ L+ GEK
Sbjct: 255 NTSTDSLFSAFWDNARVIHIIGKDILRFHSIYWPAFLMAANLKTPDVILAHGWWLNDGEK 314

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGN+IDP E+I E GVD +RYFL+REI  GKDG + K  LK+R+N++LA+ IGNL 
Sbjct: 315 ISKSLGNIIDPFELISEFGVDPVRYFLIREITVGKDGNFSKVNLKERINSELADNIGNLF 374

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R++++  K    + P  G   ES+  +L     + +E + +++   ++ +L ++I L S
Sbjct: 375 HRTLTLTAK---LLGPKIGEIYESENELLEFAYSLAKEYKNDIELLDLNSSLDRIIQLSS 431

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + Y   ++PW+L K  P+ A  +L+  +E +R +AI LQ FVP+ A+ + D+L V   
Sbjct: 432 KANEYISMEEPWKL-KEKPETAGRILHSVLEALRVIAIGLQPFVPQSASTMLDLLAVPPG 490

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIF 507
            R   ++++  R +PG  +     P+F
Sbjct: 491 ERKLANMNKESRTRPGTQIKLPISPLF 517


>gi|242309749|ref|ZP_04808904.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523750|gb|EEQ63616.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 643

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 213/512 (41%), Positives = 315/512 (61%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  IIAD LARFHRL G +VLF TGTDEHGQKI ++AQ  
Sbjct: 4   KFYITTPIYYVNDIPHIGHAYTTIIADTLARFHRLLGDEVLFLTGTDEHGQKIQQSAQKN 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K +VD+ S  FR++ D   I YD FIRTT+  H +T + ++ K+  KGDIYKG Y 
Sbjct: 64  GKNPKEYVDEISSRFRNLWDSFGIGYDWFIRTTDSYHKETAQNVFLKMFQKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++ +         + N +   +EE YFFRLSAY D+LL + E +PE
Sbjct: 124 GNYCVSCESFFAKSQLIEQKKCPDCGKETNLL---KEESYFFRLSAYGDRLLQWIEQNPE 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTT 242
            ILP  RRNEVI+F+K GL+DLS++R +FDWGIK+P+   D +++MYVW+DAL NYL+  
Sbjct: 181 CILPKMRRNEVINFIKEGLEDLSITRTSFDWGIKLPNEIGDSKFVMYVWLDALVNYLSAL 240

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  N   +K  FWPA+ H++GKDILRFHA+YWPAFL+S  LPLPK + +HG+    G K
Sbjct: 241 GY-QNNLENKMDFWPANYHLVGKDILRFHAVYWPAFLMSLELPLPKHIAAHGWWTKDGAK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV++P EV+E  G+D  RYF++RE+  G+DG + +  L +R NADL N +GNL+
Sbjct: 300 MSKSIGNVVNPKEVVESYGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLGNDLGNLL 359

Query: 363 SRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +R + M  K +D        ++  + +  +     +L  + + MQ   I+R L ++  L 
Sbjct: 360 NRLLGMSAKYFDNTLNVDLESYQNAYKMEIEEIKAILGNLNKMMQEVQINRYLEELWRLF 419

Query: 422 SEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +  +     ++PW+L K N     + +L     ++ + A+ L   +P+ A KI  +  + 
Sbjct: 420 NLANGIIAKKEPWKLIKENKQAEVAELLIFVANLLIKGALCLYPCMPESAKKIMSVFGLE 479

Query: 481 DENRCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
              + +++    + +     L+     +FP+ 
Sbjct: 480 VNAQNYKNFVCGEEVLTSVSLN-PIPALFPKI 510


>gi|154337126|ref|XP_001564796.1| methionyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061834|emb|CAM38870.1| putative methionyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 752

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 209/532 (39%), Positives = 301/532 (56%), Gaps = 29/532 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++  + ++ I Y NA PHIGH Y  +I DVL R+HR+ G +V   TGTDEHGQK+A+A
Sbjct: 207 KKQKTFFATSPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEA 266

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+T  F    S  F+     ++   + FIRTT   H      +WKK+  KGDIY 
Sbjct: 267 AAKQGVSTMDFTTSVSNEFKQCFKEMNYDMNYFIRTTNPMHEKLVGDIWKKLEAKGDIYL 326

Query: 122 GCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS+ DE++     V       G   +      + V W+ EE Y FRLSA++++L
Sbjct: 327 GKYEGWYSVSDESFLTAQNVADSVDKDGNPCKISLESGHVVTWVVEENYMFRLSAFRERL 386

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWID 233
           L ++  HP  I+P  RR EVI  V+ GL DLS+SRK     +W I +P D ++ +YVW+D
Sbjct: 387 LKHFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKCESVMNWSIPVPGDDRHCIYVWLD 446

Query: 234 ALTNYLTTTGYLDNPDGSKAK--------FWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           AL +Y   +      DG++A          WPADL V+GKDIL+FHAIYWPAFL+SA+LP
Sbjct: 447 ALFSYYVGSIVRVAADGTEALDEDYRTLSRWPADLQVVGKDILKFHAIYWPAFLMSADLP 506

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LP+++ SHG+     +KISKSLGN  DP+E   E G+DA +YFL+RE     DG Y    
Sbjct: 507 LPERLVSHGWWTKDHKKISKSLGNAFDPVEKANEFGIDAFKYFLLRESNFQDDGDYSDRN 566

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +  R+N +LA+ +GNLVSR V+  + +  G+ P P  + E+D ++++  + +   +    
Sbjct: 567 MVARLNGELADTLGNLVSRCVTPKI-NVGGVWPEPAEYNETDRTLIASLNNLAGTVDHYY 625

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               I  AL  +  ++  ++ Y     PW+L KT+  R  TVLYVT+E +R   + LQ  
Sbjct: 626 CLPDIQNALIAIFDVLRSLNVYVTDNAPWKLVKTDTARLGTVLYVTMEGLRICNMFLQPV 685

Query: 466 VPKLANKIFDILFVAD------ENRCFQSLDQRLKPGFMLH--KTFDPIFPR 509
           +P+ A +I D L V +      EN  F      +KPG  +        IF +
Sbjct: 686 MPQKAKEIMDALGVPEGVRMDMENYPF----GIVKPGTKIGGLAEGQVIFQK 733


>gi|162447002|ref|YP_001620134.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985109|gb|ABX80758.1| methionyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 516

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 215/512 (41%), Positives = 324/512 (63%), Gaps = 12/512 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YISTAIAY +A PHIG+ YE+I+AD +ARF RL+G DV F TGTDEHGQKI   A
Sbjct: 2   DKKKYYISTAIAYASAIPHIGNVYEIILADAIARFKRLEGYDVYFQTGTDEHGQKIENNA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +N  + T  +VD  S   + + +++++ YD FIRTT+  H +  + +++K+ ++GDIY G
Sbjct: 62  RNQNLETSDYVDMISNEIKRIFELVNVKYDKFIRTTDTYHKEVVQNIFEKLLEQGDIYLG 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWYS+ DEA+ N  ++  G       +   PV WM E+ YFF+LS YQD+++ + + 
Sbjct: 122 KYEGWYSVADEAFLNKADIVDG----LAPSGDIPV-WMSEDTYFFKLSKYQDRIVKHIKD 176

Query: 183 HPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +P FI P  RRNEV+  F+   L DLS+SR +F WGI +  +P++++YVWIDAL+NY+T 
Sbjct: 177 NPSFIEPENRRNEVLQSFLSEKLPDLSVSRTSFKWGIPVKSNPEHVIYVWIDALSNYITG 236

Query: 242 TGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY  + +    K FWPADLH+IGKDI+RFHA+YWPA LL+  LPLPKK+F H ++L   
Sbjct: 237 LGYNLDSNSDAMKDFWPADLHLIGKDIMRFHAVYWPALLLALGLPLPKKIFGHPWVLVDK 296

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS+GN +    +++  GVDALRY+++ EI    DG    + + +R N+DLAN +GN
Sbjct: 297 NKMSKSVGNTLYTDNLVKHFGVDALRYYVLHEIPFAADGNITYELMIERNNSDLANTLGN 356

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+R++ M+ K  +G++         D S+ + C  +L ++   M    +  A+ +++ +
Sbjct: 357 LVNRTIGMVNKYQNGLVKKVIINEPFDYSLKNKCEALLDKVSTLMNELRVGDAIEELMIV 416

Query: 421 VSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
               ++Y D  +PW L K    ++ S VLY  VE IR LA+ LQ+++P+ A KIF+ L +
Sbjct: 417 ARAANKYIDLSEPWNLNKNGETEKLSHVLYSLVETIRFLAVFLQSYMPETALKIFEQLNI 476

Query: 480 ADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
             E     S+    L P   +  T   +F RF
Sbjct: 477 --EASGLDSVKTFGLYPEQQIG-TAKVLFERF 505


>gi|290559069|gb|EFD92442.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 483

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 194/502 (38%), Positives = 293/502 (58%), Gaps = 25/502 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N +PHIGHAY   +ADV AR++RL+G +V F TGTDEHG KI K+A   
Sbjct: 3   KFYITTPIYYVNDKPHIGHAYTTFVADVFARWYRLNGENVFFLTGTDEHGGKIEKSALEK 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K  VD+NS  +R + + L+ISY+ FIRTT+  H    ++  +K+ D GDIYKG Y+
Sbjct: 63  GKTPKELVDENSDKYRQVWEKLNISYNRFIRTTDYSHEKAVKLFLQKVWDNGDIYKGEYT 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y L DE Y  + E+  G            VQ + EE YFFRLS Y+DK++    +   
Sbjct: 123 GFYCLPDERYITESELLDGK----CPTCGREVQKISEEAYFFRLSKYKDKIVDAITNG-- 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI+P +  NE++S +   LKDL ++RK   WGIK P D  + +YVW DAL NYL+   + 
Sbjct: 177 FIIPEKNANEILSRLNGELKDLDITRKNVSWGIKFPFDESHSVYVWFDALINYLSGLDWP 236

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
           D  +     FWPAD+H++GK+I+ FH++ WPA L SA +P+PK++ +H +    G+K+SK
Sbjct: 237 DGENVK--TFWPADIHLVGKEIVWFHSVIWPAMLFSAGIPVPKRIVAHAWWTVDGKKMSK 294

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV++PI+++E+ G DA RYFL+RE     DG + +  LK R+N +L + + NLV+R 
Sbjct: 295 SIGNVVNPIDMVEKYGADAFRYFLIREKPVWDDGDFSESALKNRINGELMSDLSNLVARV 354

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +++  K    +   P      DE          +++R    N   + A+  +   + +V+
Sbjct: 355 LTLAEKFKGKITGNPDLEGFIDE----------EKVRAAFDNYDPYSAINLIFEGIRKVN 404

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +YF+ +KPW L+  +    S VLY  +E IR ++I L  F+P+ + KI  +L V  +   
Sbjct: 405 KYFNDKKPWTLEGED---LSNVLYNAIEAIRIISIFLSPFMPETSEKIERMLSVDTQTLK 461

Query: 486 FQSLDQRLKPGFMLHKTFDPIF 507
                  +       K  + +F
Sbjct: 462 DAHFKTNVDS----VKRGENLF 479


>gi|297566227|ref|YP_003685199.1| methionyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850676|gb|ADH63691.1| methionyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 642

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 203/510 (39%), Positives = 290/510 (56%), Gaps = 17/510 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI Y NA PHIGH YE I+AD LAR+HRLDG    F TGTDEHG+KIA+AA  AG
Sbjct: 5   FYITTAIDYANAAPHIGHVYEKILADFLARWHRLDGYQTYFLTGTDEHGEKIARAAAKAG 64

Query: 67  VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            + K FVD+ S   FR + D L ISYDDFIRTT++RH    + + +++ + GDIY   Y 
Sbjct: 65  KSPKEFVDELSEGSFRALYDRLQISYDDFIRTTQERHKKYVQQVLQRVYEAGDIYYAEYE 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G YS+  E +  + E+    DG        PV    E  YFFR+  Y+  LL + + +PE
Sbjct: 125 GLYSVGAERFVTEKEL---VDGVLPGDSEPPV-LRREANYFFRMEKYRPWLLEHLQQNPE 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P+  RNEV+  +K  + DLS+SR      WGI IP D  ++ YVW DAL NY++   
Sbjct: 181 FIQPVGYRNEVLEMLKEPIGDLSISRPKERVPWGIPIPWDENHVTYVWFDALLNYVSALV 240

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
                +      W    HVIGKDIL+ HA++WP  L +A LPL +K+  HG IL   G K
Sbjct: 241 SKGIFEPYWRHCW----HVIGKDILKPHAVFWPTMLKAAGLPLYEKLVVHGHILALDGRK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN IDP E++E+ GVDAL Y L+R+     D  + +  +  R+N+DLAN +GNL+
Sbjct: 297 MGKSLGNAIDPAEMLEKYGVDALHYALLRDTTLAADSPFGEPVIVSRLNSDLANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR  +M+LK   G++P P     +D  I      +  ++R  ++    + AL +++  V 
Sbjct: 357 SRVRTMLLKYCGGVLPEPSG---ADSDIAREGVSLAAKVRPLIRELRFNLALEEILQYVR 413

Query: 423 EVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++Y + QKPWEL + +  +     VLY  VE +R  ++LL+A +P  A ++   L + 
Sbjct: 414 SLNKYVNDQKPWELARDDSRKKTLEEVLYTVVEGLRIASVLLEAALPNKAKELRSGLGLG 473

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D              G  + +    +FP+ 
Sbjct: 474 DFTLAQTETWGLSPAGTRIPEEAPILFPKL 503


>gi|33863015|ref|NP_894575.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33634932|emb|CAE20918.1| putative methionyl-tRNA synthetase [Prochlorococcus marinus str.
           MIT 9313]
          Length = 515

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 185/512 (36%), Positives = 286/512 (55%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  + +D LARF RL+G  V+F TG DEHGQKI + A+  
Sbjct: 3   TYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEGN 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++ K   DQ +R+++++     IS D FIRTT  RH       + ++   GD+Y G   
Sbjct: 63  NISPKHHCDQITRSYQNLWSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQ 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y ++      A          P++W +EE  FF+LS +Q   +    S P+
Sbjct: 123 GWYCVGCEEYKDE---PPQAQSPCCPIHQKPLEWRDEENLFFKLSRFQS-KIEDLISQPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P+ RRNE+ +FV  GL+D S+SR   DWG+ +P  P++  YVW DAL  YL+     
Sbjct: 179 FIWPVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDD 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G     +  +   WPA +H+IGKDILRFHA+YWPA L+SA LPLPK+VF HGF+  +G+K
Sbjct: 239 GGQVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP +++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 299 MGKSLGNVLDPEKLLEICGADAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ +M  K ++G +PT     +    +++     +  +R++M +   H A   ++ L  
Sbjct: 359 NRTSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLAI 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + Y +   PW   KT  N    +  LY  +E  R + +L+   VP L+ ++ + L ++
Sbjct: 419 AANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLS 478

Query: 481 DENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
            +   +       +L+ G +L     P+  R 
Sbjct: 479 IDGNDWSKGLAWGQLQSGALLP-PSQPVMQRL 509


>gi|88608152|ref|YP_506759.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600321|gb|ABD45789.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 503

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 212/507 (41%), Positives = 314/507 (61%), Gaps = 14/507 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++T + Y N  PHIGHAY  +IADVL R  RL G +V FTTGTDEHGQK+   A+  
Sbjct: 2   RYYVTTPVYYVNDNPHIGHAYSSLIADVLTRALRLAGHEVRFTTGTDEHGQKVQNTAKKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G     FV+  SR FRD+   +   + DFIRTTE RH +  + LW  +S    I  G YS
Sbjct: 62  GKCEIDFVNHVSRRFRDLCVAMHYDFSDFIRTTETRHKEAVQTLWSTLSKNNSISLGEYS 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS RDEA+Y + E+             +PV W +E  YFF+LS + + L   Y  +P 
Sbjct: 122 GWYSERDEAFYTEAELQ-----NSLAPTGSPVSWTKEACYFFKLSQFSEPLKKLYAENPT 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R NE+++F+ +G+ DLS+SR    WGI +PD+P + +YVW+DALTNY+++ GY 
Sbjct: 177 FIQPKSRFNEMLAFLNTGMHDLSISRTRVQWGINVPDNPTHTVYVWLDALTNYISSVGYP 236

Query: 246 DNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +    S    +  +   +H+IGKDILRFH+IYWPAFL +ANL  P  + +HG+ L+ GEK
Sbjct: 237 NTSADSLFSAFWDNARIIHIIGKDILRFHSIYWPAFLTAANLKTPDVILAHGWWLNDGEK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           ISKSLGN+IDP E+I E GVD +RYF +REI  GKDG + K  LK+R+N++LA+ IGNL+
Sbjct: 297 ISKSLGNIIDPFELISEFGVDPVRYFFIREITVGKDGNFSKVNLKERINSELADNIGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R++++  K    + P      ES+  +L     +  E + +++   ++ +L ++I L +
Sbjct: 357 HRTLTLTAK---LLGPKVSEIYESENELLEFAYSLATEYKNDIELLDLNSSLDRIIQLSN 413

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + + Y   ++PW+L K  P+ A  +L+  +E +R +AI LQ FVP+ A+ + D+L V  E
Sbjct: 414 KANEYISMEEPWKL-KEKPETAGRILHSVLEALRIIAIGLQPFVPQSASTMLDLLAVPPE 472

Query: 483 NRCFQSLDQ--RLKPGFMLHKTFDPIF 507
            R   ++++  R++PG  +     P+F
Sbjct: 473 ERKLANMNKESRIRPGTQIKLPASPLF 499


>gi|33240420|ref|NP_875362.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|33237947|gb|AAQ00015.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 507

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 183/512 (35%), Positives = 274/512 (53%), Gaps = 14/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + I+T + Y N +PH+G  Y  I  D  AR+ +L+G +V+F TG DEHGQKI + A+  
Sbjct: 2   TITITTPLYYVNDKPHLGSTYTTIACDAFARYKKLNGNNVVFITGVDEHGQKIERTAKAN 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++      + +  +  +     IS D FIRTT  +H       + ++   GDI  G   
Sbjct: 62  NISPSDHCSKIASQYEMLWKKWSISNDKFIRTTSSQHKTLVEKFFHRVDQNGDIRLGRQQ 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y +D     GA     +    P++W +EE  FF LS YQ   +    S P 
Sbjct: 122 GWYCVGCEEYKDD---PPGAKDPICSTHKMPLEWRDEENLFFCLSKYQT-KIENLISQPN 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           F+ PI RRNE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  YL+     
Sbjct: 178 FVQPISRRNEIINFVSKGLKDFSISRVNISWGIPVPGFKGHTFYVWFDALLGYLSGLQTK 237

Query: 246 DNPDGSKAKF--WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              +  +     WPAD+HVIGKDILRFHA+YWPA L+SA L LP +VF HGF+  +G K+
Sbjct: 238 GEVELDELNNYGWPADVHVIGKDILRFHAVYWPAMLMSAGLDLPHRVFGHGFLTREGNKM 297

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++++ G D +R++L+ +I  G+DG + +       N DLAN IGNL++
Sbjct: 298 GKSLGNVLDPELLLDKYGEDPVRWYLLSDIKFGQDGDFQEKRFIDLTNNDLANTIGNLLN 357

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +   +P      E++E +  + S+ + ++    +      A   ++ L S 
Sbjct: 358 RTSSMSRKWFSNCVPNIHKENENNE-LKLLASKTISDVINYYEQLSFKEACKAILDLASS 416

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI---RQLAILLQAFVPKLANKIFDILFVA 480
            + Y +  +PW+L K N +R   V Y    V+   R +A L+   +P L+ KI + L   
Sbjct: 417 SNLYLNDNEPWKLIKQNSER-ELVSYHLYNVLESCRIVATLIAPVLPNLSRKILNQLGFF 475

Query: 481 DENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
           D  + ++   +   L+ G  L +   PI PR 
Sbjct: 476 DSLQSWEHQLVWGVLEKGQELPEP-SPIIPRL 506


>gi|330718103|ref|ZP_08312703.1| methionyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 625

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 185/475 (38%), Positives = 284/475 (59%), Gaps = 13/475 (2%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            TGTDEHG KI + AQ AG +   ++D  ++  +++  ++DISYD FIRTTE +H    +
Sbjct: 1   MTGTDEHGLKIQQKAQAAGQSEIQYLDGMAKQIKELWSLMDISYDQFIRTTEPQHEAAVQ 60

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWME 161
            ++K++ D+GDIYKG Y GWYS+ DE Y+ +    EVY   +G+    +    + V+ ++
Sbjct: 61  NIFKQLLDQGDIYKGEYEGWYSVSDEEYFTESQLAEVYHDDNGKVIGGKAPSGHEVELVK 120

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKI 220
           EE YFF++S Y D LL YY+ HP FI P  R NE+I +F+  GL+DL+++R +FDWG+K+
Sbjct: 121 EEAYFFKMSKYADWLLDYYKLHPNFIQPEARMNEMISNFIAPGLEDLAMTRTSFDWGVKV 180

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
           P D ++++YVWIDAL NY+T  GY    D    ++WPA+  ++GK+I+RFH IYWP  L 
Sbjct: 181 PGDEKHVIYVWIDALANYITALGYGSADDTLFQRYWPANAQLVGKEIVRFHTIYWPIILH 240

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LPLPK V  HG+++ K  K+SKS GNVI P  + +  G+DA+RY+L+R +  G DG 
Sbjct: 241 ALGLPLPKSVIGHGWLVMKDGKMSKSKGNVIYPEVLEQRYGLDAVRYYLLRAMPFGNDGV 300

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQ 399
           +  +    RVN DLAN +GNL++R+++MI K  +G+IP      T  DE ++ + +  + 
Sbjct: 301 FTPEDFVSRVNFDLANDLGNLLNRTIAMINKYEEGIIPKLATGKTSFDEDLIRIINESMV 360

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQ 457
              ++        AL  + +++   ++Y D  +PW L K     D  S+V+      +R 
Sbjct: 361 TYHQHFNKLRTADALESIWTIIRRANKYIDETQPWVLAKDEARADELSSVMAHLAASLRV 420

Query: 458 LAILLQAFVPKLANKIFDILFVA---DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            A+LLQ  + +   KIF+ L +    +  R        L  G  + K   PIFPR
Sbjct: 421 TAVLLQPVLTQAPAKIFEQLGLDYPKEGVRIANLSFGGLPTGGKVVKKGQPIFPR 475


>gi|13357755|ref|NP_078029.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761906|ref|YP_001752278.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508737|ref|ZP_02958215.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701992|ref|ZP_02971615.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|25009406|sp|Q9PQU6|SYM_UREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|11356980|pir||C82922 methionyl-tRNA synthetase UU197 [imported] - Ureaplasma urealyticum
 gi|6899162|gb|AAF30604.1|AE002119_9 methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827483|gb|ACA32745.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675666|gb|EDT87571.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700768|gb|EDU19050.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 521

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 195/517 (37%), Positives = 307/517 (59%), Gaps = 6/517 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L+IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K   +    ++L   V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYIEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + L   +      SL       +       PIF R +
Sbjct: 481 EQLNFDESFLTLASLASYDIFNYHKVNDSKPIFARII 517


>gi|124023178|ref|YP_001017485.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123963464|gb|ABM78220.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 515

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 186/512 (36%), Positives = 288/512 (56%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  + +D LARF RL+G  V+F TG DEHGQKI + A+  
Sbjct: 3   TYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEVN 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++ +   DQ +R+++++    DIS D FIRTT  RH       ++++   GD+Y G   
Sbjct: 63  NISPQQHCDQITRSYQNLWSRWDISNDRFIRTTSHRHQLLVEAFFQRVETSGDVYLGRQQ 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y ++      A          P++W +EE  FFRLS +Q   +    S P+
Sbjct: 123 GWYCVDCEEYKDE---PPQAQSPSCPIHQKPLEWRDEENLFFRLSRFQS-QIEDLISQPD 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P+ RRNE+ +FV  GL+D S+SR   DWG+ +P  P++  YVW DAL  YL+     
Sbjct: 179 FIWPVSRRNEIQNFVAQGLRDFSISRIDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDD 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G     +      WPA +H+IGKDILRFHA+YWPA L SA LPLPK+VF HGF+  +G+K
Sbjct: 239 GGQVRIERLVECGWPASVHLIGKDILRFHAVYWPAMLSSAGLPLPKQVFGHGFLTREGQK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP ++IE  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 299 MGKSLGNVLDPEKLIEVCGEDAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ +M  K ++G +P+     +    +++     +  +R++M +   H A   ++ L  
Sbjct: 359 NRTSTMARKWFEGSVPSHRNEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLAI 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + Y +   PW   KT  N    +  LY  +E  R + +L+   VP L+ ++ + L ++
Sbjct: 419 AANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLS 478

Query: 481 DENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
            ++  + +     +L+ G +L     P+  R 
Sbjct: 479 IDSNDWSNSLAWGQLQSGALLP-PSQPVMQRL 509


>gi|94984831|ref|YP_604195.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555112|gb|ABF45026.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 670

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 204/515 (39%), Positives = 297/515 (57%), Gaps = 12/515 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + + +I+TAI Y N  PHIGH YE I+AD LAR+HRL G DV F TGTDEHG+KIAKA
Sbjct: 7   STQNEFFITTAIDYANGAPHIGHVYEKILADALARYHRLAGYDVTFVTGTDEHGEKIAKA 66

Query: 62  AQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A  AG T + FVD  S R F+ + D L+ISYDDFIRTTE RH      + +++ D GDIY
Sbjct: 67  AAKAGQTPQTFVDDLSLRAFKGLWDRLEISYDDFIRTTEGRHKRFVAEILQRVYDAGDIY 126

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG-QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
              Y G YS+  E Y  + E+ +G DG + Y    +P +   E  YFFR+  YQD L ++
Sbjct: 127 FAEYEGLYSVGAERYVTEKELVEGPDGVRRYPGDKDPPELRREANYFFRMEKYQDWLRAH 186

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
            E +P+FI P   RNEV+  ++  + DLS+SR      WGI++P DP ++ YVW DAL N
Sbjct: 187 IEQNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLN 246

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y++        + +  K W    HVIGKDIL+ HA++WP  L +A LP+ +K+  H  IL
Sbjct: 247 YVSAPVSRGLGEETIGKAW----HVIGKDILKPHAVFWPTMLRAAGLPIYRKLVVHSHIL 302

Query: 298 -HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+ KSLGN IDP +++ E  VDA+RY L+RE     D  Y +  L  R+N+DLAN
Sbjct: 303 AEDGRKMGKSLGNAIDPEQLVREYPVDAIRYTLLREATLSADSPYGEGILVSRLNSDLAN 362

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL+SR+VSMI K   G++P      E +  + +    +  E+   +++  ++ A+  
Sbjct: 363 DLGNLLSRTVSMIQKYRGGVLPQALEVGEREREVEAKALALPSEVMTLVRDLKVNMAIET 422

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++ V +++RY    +PW L K+     R  TVLY   E +R  ++ L+A +P  A ++ 
Sbjct: 423 AMNFVRDLNRYIAESQPWNLAKSEETARRLDTVLYTAAEGLRVASVALEAVIPGKARELR 482

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             L +  ++   +        G  +      +FP+
Sbjct: 483 AQLGLGGQSYALRGAWGLTPAGTRVV-GGPVLFPK 516


>gi|50954430|ref|YP_061718.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950912|gb|AAT88613.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 589

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 189/479 (39%), Positives = 286/479 (59%), Gaps = 10/479 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I Y N  PHIGHAY  + ADVL R+HR  G DV    GTDEHGQKI + A    
Sbjct: 12  FYITTPIFYVNDVPHIGHAYTEVAADVLVRWHRQAGEDVWLLAGTDEHGQKILRTAAAQR 71

Query: 67  VTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           ++   + D+    ++R + + L IS DDFIRTTE RH          + +KG +Y+G Y 
Sbjct: 72  LSPAEWTDRLVHDSWRPLLEALRISADDFIRTTEDRHKVVVIAFLTLLREKGLVYEGTYE 131

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G+Y +  E Y  + ++  G                V  + E+ YFF++SA+QD+LL    
Sbjct: 132 GFYCVGCEEYKQESDIIAGTGAFAGQVLCPVHARSVDVVNEKNYFFKMSAFQDRLLEML- 190

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +  EF+ P   RNE+++FV SGLKD+S++R +FDWG+++P +P +++YVW DAL NY++ 
Sbjct: 191 ADEEFLRPAAVRNEILAFVGSGLKDISITRSSFDWGVEVPWEPGHVVYVWFDALLNYISG 250

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            G+  + +    + WP D+H+IGKDI R HA+ WPA L++A+LP+PK++ +HG++L  GE
Sbjct: 251 IGWGSDVE-EFDRRWP-DVHIIGKDIARLHAVLWPAMLMAADLPVPKRIVAHGWLLVNGE 308

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS    I P ++++  G+DA RY+ VR I  G+DG +  D + +R NADLANG+GNL
Sbjct: 309 KMSKSNATGIGPEQIVKAFGIDAFRYYFVRSIVFGQDGSFSWDDIHRRYNADLANGLGNL 368

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+++MI K   G++P   A T +++ +    ++        +    +  AL QV ++V
Sbjct: 369 VSRTIAMITKYRAGIVPEAAAPTAAEDEVRHTITQARANASAAIDRFALSEALGQVWTIV 428

Query: 422 SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             ++ Y   Q PW L +      R  TVL    E +R+LA+LL+ F+P  A  I+  L 
Sbjct: 429 ERLNSYITEQTPWSLARDEAQAHRLDTVLNTVAEGLRELAVLLRPFLPDTAQAIWAGLG 487


>gi|148239464|ref|YP_001224851.1| methionyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147848003|emb|CAK23554.1| Methionyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 514

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 187/512 (36%), Positives = 279/512 (54%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y NA+PH+G  Y  +  D LARF RL+G DV+F TG DEHGQKI + A+  
Sbjct: 2   TYSLTTPLYYVNAKPHLGSVYTTLACDALARFQRLEGQDVVFITGVDEHGQKIQRTAETQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++     D+ S  + D+     IS D F+RTT  RH    +  +++    G I  G   
Sbjct: 62  NISPIDHCDRISALYSDLWTRWHISNDRFVRTTSPRHLPLVQAFFQRCEAAGHIRTGHQE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + +D    K  D         P++W +EE  FF LS +Q+  +    + P+
Sbjct: 122 GWYCVDCEEFKDDPADAKAPD---CPIHRKPLEWRDEENLFFCLSQFQE-RIETLIADPQ 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RR E+ +FV  GL+D S+SR    WG+ +P  P +  YVW DAL  YLT     
Sbjct: 178 FIAPASRRREIENFVAGGLRDFSISRVNVSWGLPVPGHPGHTFYVWFDALLGYLTALLDD 237

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                        WPAD+HVIGKDILRFHA+YWPA L+SA LP+PK+VF HGF+  +G+K
Sbjct: 238 GGAVDLDRLADIGWPADVHVIGKDILRFHAVYWPAMLMSAGLPVPKRVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + K+LGNV+DP  ++E  G DA+R++L+R+I  G+DG + +      VN DLAN IGNL+
Sbjct: 298 MGKALGNVLDPEILLERCGTDAVRWYLLRDIQFGEDGDFQQQRFMDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K ++  +P       S+  +     + ++ +R+++       A   V+ L  
Sbjct: 358 NRTASMSRKWFEASLPPVSPDVRSEHPLKQPTEQTIERVRQSIPALAFQDAAEAVLQLAI 417

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--F 478
           E + Y + Q PW L K   + ++    LY  +E  R + +LLQ  VP L+++I   L   
Sbjct: 418 EANGYLNEQAPWSLMKQPGHEEKVGDDLYAVLECCRVIGLLLQPLVPGLSSRILAQLDQR 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +D+         +L+PG  L K  +P+  R 
Sbjct: 478 PSDDGWTQALRWGQLEPGVGLPKP-EPVMQRL 508


>gi|171920487|ref|ZP_02931504.2| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902953|gb|EDT49242.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 521

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 195/517 (37%), Positives = 307/517 (59%), Gaps = 6/517 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L+IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K   +    ++L   V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + L   +      SL       +       PIF R +
Sbjct: 481 EQLNFDESFLTLASLASYDIFNYHKVNDSKPIFARII 517


>gi|322815163|gb|EFZ23882.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 765

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 210/525 (40%), Positives = 299/525 (56%), Gaps = 22/525 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +++T I Y NA PHIGH Y  +IADV+ R+H + G  V   +GTDEHGQK+A+AA+  G
Sbjct: 234 FFVTTPIYYVNAAPHIGHVYSTLIADVIGRYHTIKGERVFAMSGTDEHGQKVAEAARQKG 293

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +    F  Q SR F D  + +    D FIRTT + H      LW K+  KGDIY G Y G
Sbjct: 294 MNPYDFTFQVSREFIDCFEQMGYHMDYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WYS+ DE++     V  G D      +      + V W+ E+ Y FRLSA++++LL +Y 
Sbjct: 354 WYSVSDESFLTAQNVTDGVDKDGKPCKVSLESGHVVTWLAEDNYMFRLSAFRERLLEWYN 413

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWIDALTNY 238
           ++P  I+P  RR EVI  V+ GL DLS+SR      DW I +P +P + +YVW+DAL+NY
Sbjct: 414 NNPGCIVPEFRRREVIRTVEKGLNDLSVSRTREAVQDWAIPVPGNPNHCIYVWLDALSNY 473

Query: 239 LTTTGYLDNPDGSK---------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            T +       G +          + +PAD+HVIGKDIL+FHAIYWPAFL+SA LPLPK 
Sbjct: 474 YTGSRLRLGNSGEELELVEDHRVLERFPADIHVIGKDILKFHAIYWPAFLISAGLPLPKT 533

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + +HG+     +KISKSLGNV DP+E   E G DAL+YFL+RE     DG Y    +  R
Sbjct: 534 IVAHGWWTKDRKKISKSLGNVFDPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMIAR 593

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +N +LA+ +GNLV R  S  + +     PTP A+   DE+++ +   +   +        
Sbjct: 594 LNGELADTLGNLVMRCTSAKI-NVHREWPTPDAYNAKDEALIQLIKELPGVVDHFFLIPD 652

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + +ALA V  ++  ++ Y     PW L KT+PDR  TVLY+T+E  R   ++L   + + 
Sbjct: 653 VQKALAAVFDVLRAINSYVTENAPWRLVKTDPDRLRTVLYITMEGTRLATLMLSPVLSQK 712

Query: 470 ANKIFDILFVADENR-CFQSLDQRLKP-GFMLHKTFD--PIFPRF 510
           A  IFD+L V + NR   ++    + P G  +    +   +FP+ 
Sbjct: 713 APVIFDMLGVPEANRVGVENFGFGVVPSGTPIGDAVEGKALFPKI 757


>gi|157829738|pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus
          Length = 500

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 198/506 (39%), Positives = 297/506 (58%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ YVW DAL NY++   Y
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTYVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
                 +   FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 --PEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G IP P A  E     L+  + +   +R  ++    H AL + ++ V  
Sbjct: 359 RTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAGRLRPLVRELKFHVALEEAMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     + +    +FP+
Sbjct: 474 RLEEAERWGLAEPRPIPEEAPVLFPK 499


>gi|189485353|ref|YP_001956294.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287312|dbj|BAG13833.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 512

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 195/518 (37%), Positives = 287/518 (55%), Gaps = 21/518 (4%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGH+Y  I +D++AR+ RL G DV F TGTDEHG KI  AA+  
Sbjct: 2   KFYITTPIYYANDIPHIGHSYTTIASDIMARWKRLKGFDVFFLTGTDEHGAKIVAAAKKK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   +   D+ S  F++  ++L+ISY DFIRTTE++H  +   +   + DKG I+K  Y 
Sbjct: 62  GEIPQKLCDKMSAKFKEAWELLNISYTDFIRTTERKHFVSVEKILSILFDKGFIFKKKYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             Y +  E +Y   ++    +G     +  PV    EE YFFRLS++Q+ L+        
Sbjct: 122 ELYCIGCERFYAQKDL--DENGCCPFHKTKPV-LQSEENYFFRLSSFQNALIDRIVDANH 178

Query: 186 F----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                I P ERRNE+I  +K GL+D+S SR   +WGI +P D     YVW+DAL NY+T 
Sbjct: 179 REHIEIQPEERRNEIIGKLKLGLEDVSFSRSAVEWGIPLPFDGGQTAYVWVDALINYITG 238

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY    +    K+WPAD+H++ KDIL FH++ WPA L+ A LPLPKK++SHGF    G 
Sbjct: 239 VGY-QENETKFQKYWPADIHLMAKDILWFHSVIWPAILMGAGLPLPKKLYSHGFFTLNGN 297

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+ P E++++ GVDA RY     I  G DG      L  + N DLAN +GNL
Sbjct: 298 KMSKSLGNVVSPRELVDKYGVDAARYLAATIIPFGPDGDISWQRLTLKYNTDLANNLGNL 357

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL-QEIRENMQNQLIHRALAQVISL 420
           +SR++ M  K ++  +P     T  D  ++     VL ++   NM N   H+A   + S 
Sbjct: 358 ISRTLKMAEKYFNLYVPQ----TIPDLELVRKVVTVLKKKFALNMDNMQFHKAAETLQSA 413

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ V+R  +   PW+L KT+ D+ ++ +Y  ++    + + L  F+P +A KI+ I    
Sbjct: 414 ITLVNRQIEIDAPWKLAKTDTDKLASCIYAYLQSADIIIMHLLPFMPTMAEKIWQITGAG 473

Query: 481 DE-----NRCFQSL---DQRLKPGFMLHKTFDPIFPRF 510
            +      + F+     +          ++   +FPR 
Sbjct: 474 CDINLTAKKYFKDAVIPENGFSISNAKLQSPGILFPRI 511


>gi|188524069|ref|ZP_03004160.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195659982|gb|EDX53362.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
          Length = 521

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 195/517 (37%), Positives = 305/517 (58%), Gaps = 6/517 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIKLVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K        ++L   V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQKQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + L   +      SL       +       PIF R +
Sbjct: 481 EQLNFDESFLTLASLASYDIFNYHKVNDSKPIFARII 517


>gi|85057769|ref|YP_456685.1| methionyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789874|gb|ABC65606.1| methiony-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 520

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 207/518 (39%), Positives = 302/518 (58%), Gaps = 20/518 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K ++STAIAY +  PHIG+ YE I+AD +ARF RL+G DV F TGTDEHGQKIA  
Sbjct: 6   KQKPKFFLSTAIAYASGIPHIGNVYECILADAIARFKRLEGFDVFFQTGTDEHGQKIAAK 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +   G   + +VDQ S   + + D++ +SYD F++TT   H  T + ++ K+  KGDIY 
Sbjct: 66  SLQQGKNPQEYVDQISLEIKRIYDLMQVSYDKFVKTTNPNHKQTVQAIFDKLWKKGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G YS+ +E+Y    ++  G               + EE YFF++S YQ  LL Y E
Sbjct: 126 GKYQGLYSVSEESYVAPKDLIDGKTSNGEIP-----ILISEETYFFKISKYQSHLLKYLE 180

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           ++P  I P  +R E+++ +K  L DLS+SR +F WGI++P DP++++YVWIDAL+NYLT 
Sbjct: 181 NNPSLIKPDAQRKELLNLLKEPLSDLSVSRTSFKWGIRVPFDPKHVIYVWIDALSNYLTG 240

Query: 242 TGYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            GY    + S   ++WP D+HVIGKDILRFH IYWP  L++  + LPK+  +H +IL   
Sbjct: 241 LGYNPTSENSQFNRYWPCDMHVIGKDILRFHLIYWPILLMALEISLPKQFLTHPWILFDK 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+   ++++   VD++RYF++ EI   +DG    + L +R N+DLAN +GN
Sbjct: 301 NKMSKSKGNVLYVDDLLKHFPVDSIRYFVLSEIPYAQDGNITYELLVERHNSDLANVLGN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           LV R   MI       +      +  D    +       L  +R  MQ+  +  AL ++I
Sbjct: 361 LVHRVFGMIKIYRQNNLSKTLITSNLDPKFDLSKQTLATLPSVRLKMQDYKVGDALKKII 420

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +L    ++Y D  +PW L K NP++       LY  VE +R L +LLQ F+P+ ANKI  
Sbjct: 421 NLARFANKYIDLVEPWNLFK-NPEKQQLLDHTLYSLVEALRFLGVLLQPFLPQTANKILT 479

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
            L  +D    F+SLD     G +  +  D    +F R 
Sbjct: 480 QLKASD--ITFKSLDT---FGILPSQKLDNYHILFNRL 512


>gi|171920815|ref|ZP_02931489.2| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188518520|ref|ZP_03003990.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|198273255|ref|ZP_03205791.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554038|ref|YP_002284592.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550469|ref|ZP_03771418.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903582|gb|EDT49871.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188997923|gb|EDU67020.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|198249775|gb|EDY74555.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541539|gb|ACI59768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379623|gb|EEH01985.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 521

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 195/517 (37%), Positives = 305/517 (58%), Gaps = 6/517 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+++   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N +    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNEELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K        ++L   V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQKQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + L   +      SL       +       PIF R +
Sbjct: 481 EQLNFDESFLTLASLASYDIFNYHKVNDSKPIFARII 517


>gi|185178808|ref|ZP_02964601.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024305|ref|ZP_02996992.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|195867767|ref|ZP_03079768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|225551127|ref|ZP_03772073.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209436|gb|EDU06479.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018979|gb|EDU57019.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|195660622|gb|EDX53878.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|225378942|gb|EEH01307.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 521

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 197/517 (38%), Positives = 306/517 (59%), Gaps = 6/517 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K +IST I Y +  PHIGHAY  IIADVLAR+ RL G DV F TG DEHGQKI +
Sbjct: 1   MLKQKKFFISTPIYYSSGNPHIGHAYTTIIADVLARYKRLFGYDVFFLTGMDEHGQKIQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K  VD+NS  F ++   L IS+  FIRTT+  H ++ + ++  +  +G IY
Sbjct: 61  KAFEENISPKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G ++G+Y +  E  YN  E+ K  D        + ++   EE YF+++S     L +YY
Sbjct: 121 LGQWTGYYCVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++HP FI+P ER NE+I+   + L+DLS+SR TFDWGI I ++P++++YVW+DAL NYLT
Sbjct: 181 QNHPNFIIPNERANEMINNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLT 240

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            TGYL N D    K+W  +    +H++ K+I RFH IYWP FL    +  P  + SHG+I
Sbjct: 241 ATGYLSNNDELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLNDLQIRFPSTILSHGWI 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K  K+SKSLGNVIDP  +I+  GVDALRY+L+ +++  +D  + +D L +  N  LAN
Sbjct: 301 ITKEGKMSKSLGNVIDPNVLIDTYGVDALRYYLMADLSLFRDAIFSEDNLIETYNTQLAN 360

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN++SR++ M+ K  + ++P   G   ++DE + ++ ++ ++ ++EN+    I +AL 
Sbjct: 361 SYGNMISRTLGMLKKYRNNIVPKYVGCVLKNDEKLENLINKNIELVQENINKYSIDKALN 420

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  ++ E ++Y +  KPWEL K   +    ++L   V+VI+    LL   + + + K  
Sbjct: 421 CIQEILVEANKYVEDNKPWELAKNQQEQELDSLLVHLVKVIQVTTTLLSPILIEGSKKAV 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + L   +      SL       +       PIF R +
Sbjct: 481 EQLNFDESFLTLASLASYDILNYHKVNDSKPIFARII 517


>gi|71415852|ref|XP_809978.1| methionyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874442|gb|EAN88127.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 765

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 211/525 (40%), Positives = 299/525 (56%), Gaps = 22/525 (4%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I+T I Y NA PHIGH Y  +I DV+ R+H + G  V   +GTDEHGQK+A+AA+  G
Sbjct: 234 FFITTPIYYVNAAPHIGHVYSTLIVDVIGRYHTMKGERVFAMSGTDEHGQKVAEAARQKG 293

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +    F  Q SR F D  + +    D FIRTT + H      LW K+  KGDIY G Y G
Sbjct: 294 MNPYDFTCQVSREFIDCFEQMGYHMDYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WYS+ DE++     V  G D      +      + V W+ E+ Y FRLSA++++LL +Y 
Sbjct: 354 WYSVSDESFLTAQNVTDGVDKDGKPCKVSLESGHVVTWLAEDNYMFRLSAFRERLLEWYN 413

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQYIMYVWIDALTNY 238
           ++P  I+P  RR EVI  V+ GL DLS+SR      DW I +P +P + +YVW+DAL+NY
Sbjct: 414 NNPGCIVPEFRRREVIRTVEKGLNDLSVSRTREAVQDWAIPVPGNPNHCIYVWLDALSNY 473

Query: 239 LTTTGYLDNPDGSK---------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            T +       G +          + +PAD+HVIGKDIL+FHAIYWPAFL+SA LPLPK 
Sbjct: 474 YTASRLRLGKSGEELELVEDHRVLERFPADIHVIGKDILKFHAIYWPAFLISAGLPLPKT 533

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + +HG+     +KISKSLGNV DP+E   E G DAL+YFL+RE     DG Y    +  R
Sbjct: 534 IVAHGWWTKDRKKISKSLGNVFDPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMISR 593

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +N +LA+ +GNLV R  S  + +   + PTP A+   DE+++ +   +   +        
Sbjct: 594 LNGELADTLGNLVMRCTSAKI-NVHRVWPTPDAYNAKDEALIQLIKDLPGVVDHFFLIPD 652

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           + +ALA V  L+  ++ Y     PW L KT+PDR  TVLY+T+E  R   ++L   + + 
Sbjct: 653 VQKALAAVFDLLRAINSYVTENAPWRLVKTDPDRLRTVLYITMEGTRLATLMLSPVLSQK 712

Query: 470 ANKIFDILFVADENR-CFQSLDQRLKP-GFMLHKTFD--PIFPRF 510
           A  IFD+L V + NR   ++    + P G  +    +   +FP+ 
Sbjct: 713 APVIFDMLGVPEANRVGVENFGFGVVPSGTSIGDAVEGKVLFPKI 757


>gi|226355830|ref|YP_002785570.1| methionine--tRNA ligase [Deinococcus deserti VCD115]
 gi|226317820|gb|ACO45816.1| putative Methionine--tRNA ligase (Methionyl-tRNA synthetase)
           (MetRS) [Deinococcus deserti VCD115]
          Length = 668

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 189/514 (36%), Positives = 283/514 (55%), Gaps = 12/514 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    + +++TAI Y N  PHIGH YE I+AD + R+ RL G +V F  GTDEHG+KI+K
Sbjct: 1   MTANNEFFLTTAIDYANGAPHIGHVYEKILADAIVRYQRLAGKNVTFVMGTDEHGEKISK 60

Query: 61  AAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AA   G+T +  VD  + R F+ + D L ISY +FIRTTE RH    + + +++ D GDI
Sbjct: 61  AAAKEGLTPQALVDDLSVRAFKGLWDRLGISYSEFIRTTEGRHKRFVQDVLQRVYDSGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLS 178
           Y   Y G YS+  E Y  + E+ +G DG         P +   E  YFFR+  YQ+ LL 
Sbjct: 121 YFAEYEGLYSVGAERYVTEKELVEGPDGVRRFPGDKDPPELRREANYFFRMEKYQEWLLG 180

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
           +   +P+ I P   RNEV+  +K  + DLS+SR      WG+++P D  ++ YVW DAL 
Sbjct: 181 HLRENPDLIQPSGYRNEVLEMLKEPIGDLSISRPKNRVPWGVELPWDADHVTYVWFDALL 240

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           +YLT        +      W    HVIGKDIL+ HA++WP  L +A +P+ +K+  H  I
Sbjct: 241 SYLTPLVTRGVDESVSGLAW----HVIGKDILKPHAVFWPTMLKAAGMPVYRKLVVHSHI 296

Query: 297 L-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           L   G K+ KSLGN IDP +++ +  VDA+RY ++RE     D  + +  L  R+N+DLA
Sbjct: 297 LAEDGRKMGKSLGNAIDPEKLVADYPVDAIRYAMLREATLSADSPFGEGILVSRLNSDLA 356

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N +GNL+SR+VSMI K  +G+IP PG   + +  I +    +  E+   + +  ++ A+ 
Sbjct: 357 NDLGNLLSRTVSMIQKYREGVIPAPGQPADRERVIEAAAIALPGEVLRLVGDLKVNMAIE 416

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             ++ V +++RY     PW L K+     R  TVLY   E +R  ++ L+A +P  A ++
Sbjct: 417 AAMNFVRDLNRYIAESAPWNLAKSEETQGRLDTVLYTAAEGLRVASVCLEAVIPGKAREL 476

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
              L +  +     S    L P     +    +F
Sbjct: 477 RAQLGLGGQTYAL-SGAWGLTPAGTRVQGGAILF 509


>gi|78100832|pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f
           Mutant From Thermus Thermophilus
 gi|119389107|pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna
           Synthetase Y225f Mutant Obtained In The Presence Of
           Peg6000
          Length = 500

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 197/506 (38%), Positives = 297/506 (58%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++ +VW DAL NY++   Y
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTFVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
                 +   FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 --PEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G IP P A  E     L+  + +   +R  ++    H AL + ++ V  
Sbjct: 359 RTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAGRLRPLVRELKFHVALEEAMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     + +    +FP+
Sbjct: 474 RLEEAERWGLAEPRPIPEEAPVLFPK 499


>gi|325283464|ref|YP_004256005.1| Methionyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315273|gb|ADY26388.1| Methionyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 685

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 187/513 (36%), Positives = 287/513 (55%), Gaps = 12/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L+I+TAI Y N  PHIGH +E I+AD +AR+ RL G       GTDEHG+KI KAA  
Sbjct: 8   KQLFITTAIDYANGVPHIGHVFEKILADAIARYQRLSGRPTHLLLGTDEHGEKILKAAAA 67

Query: 65  AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G+T +  VD  + R FR + + L IS D F+RTT+ +H    + + +++ D GDIY   
Sbjct: 68  QGITAQELVDDLSQRAFRGLWERLGISLDQFVRTTDAQHQQFVQDILQRVYDAGDIYFAE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYES 182
           Y G YS+  E Y  + E+ +G DG         P +   E  YFF++  YQ  L  Y E+
Sbjct: 128 YEGLYSVGSERYVTEKELVEGPDGIKRVPGDKEPPELRREANYFFKMEKYQPWLREYLEA 187

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLT 240
           HP+ I P   RNEV+  +K  L DLS+SR      WG+ IP DP+++ YVW DAL  YL+
Sbjct: 188 HPDLIQPAGFRNEVLEMLKEPLGDLSISRPKERIPWGVPIPWDPEHVTYVWFDALLAYLS 247

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HK 299
                  P+    + W    HVIGKDIL+ HAI+WP  L SA LP+  ++  H  IL   
Sbjct: 248 GPVGKGQPENVTGQTW----HVIGKDILKPHAIFWPTMLKSAGLPVYDRLVVHSHILAED 303

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+ KSLGN IDP +++++  +DA+RY L+RE + G D  + +  L  R+N +LAN +G
Sbjct: 304 GRKMGKSLGNAIDPEQLVQDFPLDAIRYALLREASMGSDTPFGETILVGRLNGELANDLG 363

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL++RS+SMI K   G+IP  G     ++ I++    +   +   + +  ++ AL   + 
Sbjct: 364 NLLARSLSMIEKYRGGLIPAAGELGVREQKIVADAQSLPGRVMALVNDFKLNMALDAAMG 423

Query: 420 LVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V +++RY    +PW+L K      +  TVLY   E +R  ++ L+  +P  A ++   L
Sbjct: 424 FVRDLNRYIAESEPWKLAKDEAQAGQLDTVLYTVAEGLRVASVALEGAIPGKAQELRRQL 483

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + D++   ++       G  + ++ + +FP+ 
Sbjct: 484 GLGDQSYTLEAAWGLTPAGTRI-QSGEVLFPKL 515


>gi|122919781|pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a
           Mutant From Thermus Thermophilus
          Length = 502

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 197/506 (38%), Positives = 296/506 (58%), Gaps = 14/506 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH+GHAY  ++AD LAR+HRLDG    F TGTDEHG+ + +AAQ AG
Sbjct: 5   FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ S  F+   D+L I+YDDFIRTTE+RH    +++ KK+ + GDIY G Y G
Sbjct: 65  EDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E +Y + E+ +G           PV+  +E  YFFR+  Y+  L  Y + +P+ 
Sbjct: 125 LYCVSCERFYTEKELVEG----LCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDL 180

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           I P   RNEV++ +   + DLS+SR      WGI +P D  ++  VW DAL NY++   Y
Sbjct: 181 IRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTAVWFDALLNYVSALDY 240

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKI 303
                 +   FWP   H+IGKDIL+ HA++WP  L +A +P+ + +   GF+L   G K+
Sbjct: 241 --PEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDGRKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK+LGNV+DP  ++E+ G DALRY+L+REI  G+D    ++ L+ R  ADLA+ +GNLV 
Sbjct: 299 SKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQ 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ +M+ +  +G IP P A  E     L+  + +   +R  ++    H AL + ++ V  
Sbjct: 359 RTRAMLFRFAEGRIPEPVAGEE-----LAEGTGLAGRLRPLVRELKFHVALEEAMAYVKA 413

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++RY + +KPWEL K  P+ A  VLY  VE +R  +ILL   +P    ++   L + +E 
Sbjct: 414 LNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV 473

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           R  ++    L     + +    +FP+
Sbjct: 474 RLEEAERWGLAEPRPIPEEAPVLFPK 499


>gi|255076485|ref|XP_002501917.1| methionyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226517181|gb|ACO63175.1| methionyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 931

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 196/508 (38%), Positives = 283/508 (55%), Gaps = 14/508 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  I+TAI Y N  PH+GHAYE I AD +AR+HR  G DVLF TG+DEHGQKIA+AA+ 
Sbjct: 228 EKFCITTAINYANGAPHMGHAYEAISADCIARYHRRYGRDVLFQTGSDEHGQKIAEAAET 287

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG       D+    F+ +     +S D + RTT + H   CR L++     GDIY   Y
Sbjct: 288 AGCAPIELCDKYVNAFQTLNAKTKVSNDVYNRTTSESHKAACRKLFEMSKANGDIYLDTY 347

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++R+E +  + +               P++ M+EE YFFR S YQ +L+ + E +P
Sbjct: 348 EGWYNVREETFVTETDAAAAN--YLDPVSGKPLKKMKEESYFFRQSRYQSRLIEHIEKNP 405

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            FI P  RRNE++    +  L+DLS+SR TFDWGI +PD P ++MYVW DALTNYLT TG
Sbjct: 406 AFIQPTRRRNEILARLREDELRDLSVSRTTFDWGIPVPDAPGHVMYVWFDALTNYLTGTG 465

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           +   P+G     WPA +H+IGKDI+ FH + WP  L SA LPLPK VF HGF+    G+K
Sbjct: 466 WPQKPNGD--GMWPASVHIIGKDIIWFHCVIWPCMLWSAGLPLPKTVFGHGFVTAADGQK 523

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP++ +     D  RY+L+R    G D  + +  L    N+DLA+ +GNLV
Sbjct: 524 MSKSIGNVVDPMDQLTRYSSDTFRYYLMRNAVYGSDVPFSESNLVYVHNSDLADVMGNLV 583

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R+ ++  K+  G++P        D ++L V      +  + M N  + R     I+ + 
Sbjct: 584 HRATNLCNKNCGGVVPDCVPEKVFDVNLLRV------QSEQAMSNLEVQRCCELAINAMK 637

Query: 423 EVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + ++Y     PW +K     +R + ++  T+E +   A  L  F+P   + IF+ L    
Sbjct: 638 DTNKYLTDSAPWAVKGDGAAERKAVIIRSTLEAVYAAAHFLAPFIPDACDAIFEKLGTPA 697

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                    + L PG  +    D +F +
Sbjct: 698 VPAWKLKRSENLAPGTAV-SVGDILFAK 724


>gi|258591914|emb|CBE68219.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [NC10
           bacterium 'Dutch sediment']
          Length = 646

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 181/519 (34%), Positives = 284/519 (54%), Gaps = 21/519 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKI 58
           M ++   Y++T I Y NA PH+GHAY  I+AD +ARF +L      V F TGTDEHG KI
Sbjct: 1   MSDQ-TFYLTTPIYYVNATPHLGHAYTTILADTMARFKKLRLGPEQVYFLTGTDEHGDKI 59

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +AA   G + + + D+ S  F++    L ++ + FIRTT + H    +   ++I D GD
Sbjct: 60  VQAAAQGGESPQAYADRISGIFQETWKRLGLAPNQFIRTTSEPHKRAVQRFLQQIYDAGD 119

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IY G Y G Y    E +Y + E+                 +++E+ YFFR+  YQ+ L+ 
Sbjct: 120 IYFGEYGGHYCFGCERFYTEKELQD----SKCPDHQTVPAFIKEQNYFFRMGKYQEWLID 175

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
           +   H +FI P   RNEV+SF+K  L+DL +SR     +WGI +P D +Y+ YVW DAL 
Sbjct: 176 HIHRHADFIRPERFRNEVLSFLKEPLEDLCISRPSTRLEWGIPLPFDDRYVTYVWFDALI 235

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY++   + D    +  +FWP+  H+I KDIL+ HAIYWP  L +A LP  + +  HG+ 
Sbjct: 236 NYISALDWPDGE--AFRRFWPSAQHLIAKDILKPHAIYWPTMLKAAGLPPYRHLNVHGYW 293

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +  K+SKS G+V+ P+++ ++ GVDA RYF++RE+  G D  + +D L  R+NADLAN
Sbjct: 294 KIEEAKMSKSRGSVVRPLDLADKYGVDAFRYFVLREMTFGLDAGFSEDALVARLNADLAN 353

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL SR + +I + Y G+I      T  D  +       + ++   M+      ALA 
Sbjct: 354 DLGNLYSRVLKLIQRYYGGIITH----TPGDGDLAEAARVAVTDVMAAMERFAFSEALAA 409

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + +LVS  ++Y    +PW+    +P     +L    E +R +A LL  F+P+ A+++   
Sbjct: 410 IWNLVSATNKYLVHNEPWKRDPGDPQ-TKAILVTAAETLRTIATLLLPFLPQTADRMLRG 468

Query: 477 LFVADENRC--FQSL---DQRLKPGFMLHKTFDPIFPRF 510
           L + +      F++      R++      +  + +FPR 
Sbjct: 469 LGITEPTTPLRFETACPSPSRIEVQEWRVQEVESLFPRI 507


>gi|254456247|ref|ZP_05069676.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083249|gb|EDZ60675.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 494

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 225/491 (45%), Positives = 332/491 (67%), Gaps = 4/491 (0%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GHAY  IIAD  ARF ++DG +V F TGTDEHG KI +AA+   + T  F DQ S+ FR
Sbjct: 1   MGHAYSSIIADFFARFKKMDGFNVYFLTGTDEHGLKIQRAAEKQNIDTLEFCDQISQTFR 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++  L+++  DFIRTTE+RH  T + LWK++     IY   YSGWYS+ DEA+YNDDE+
Sbjct: 61  NLSKTLNLTNTDFIRTTEERHKKTVQYLWKELEKNDYIYLSKYSGWYSVSDEAFYNDDEI 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               + +   +  + V+W+EEE YFFRLS ++  LL YY+SHP+FI P  RRNEVISFVK
Sbjct: 121 ETIDENKVAISSKSKVEWIEEESYFFRLSKWEKPLLDYYKSHPDFIAPESRRNEVISFVK 180

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           SGLKDLS+SRK+F WGIK+P++  +++YVW+DALTNYL+   + +  D     FWPA +H
Sbjct: 181 SGLKDLSVSRKSFSWGIKVPNNNDHVIYVWLDALTNYLSALNFPNANDELFKNFWPASIH 240

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +IGKDILRFHA+YWPAFLL+A + LP KV+ HG+IL   EK+SKS GN++DP+E+I+E G
Sbjct: 241 LIGKDILRFHAVYWPAFLLAAKIELPTKVYGHGWILSDNEKMSKSKGNILDPLEIIKEYG 300

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           +D LRY+L++E++ G DG   ++ L+  +N+DLAN  GNL  R  +  +K+ +  IP   
Sbjct: 301 LDPLRYYLIKEVSFGNDGNISQERLEDCINSDLANNFGNLCQRVTAFAIKNCESKIPKQI 360

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            F + D  IL+     L+ IRE + NQ I+  +  +I+ + E ++YF+ Q+PW+ KK + 
Sbjct: 361 DFQKEDLEILNKYMNNLENIREKIDNQDINFYIDYIINSLFEANKYFNDQEPWK-KKDDQ 419

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFML 499
            R +T++Y T+E++R+++ LL   +P  + K   I  + +++  F S++    L  G  +
Sbjct: 420 LRLNTIVYTTLEIVRKISFLLFPIIPNSSLKALKIFNLTEKDINFSSIENNDFLVKGSNI 479

Query: 500 HKTFDPIFPRF 510
           +K  D +F + 
Sbjct: 480 NK-IDILFKKI 489


>gi|254431009|ref|ZP_05044712.1| methionyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625462|gb|EDY38021.1| methionyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 533

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 183/501 (36%), Positives = 272/501 (54%), Gaps = 14/501 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y N + H+G  Y  +  D +AR+ RL G  V+F TG DEHGQKI + A+ AG
Sbjct: 3   YTLTTPLYYVNDRAHLGSTYTTLACDAIARYQRLCGEQVVFITGCDEHGQKIQRTAEAAG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ +   D+ S  +RD+ D   IS+D FIRTT+ RHH+     + ++  +GD+ +G   G
Sbjct: 63  VSPQDHCDRISAGYRDLWDRWQISHDRFIRTTDPRHHELVAQFFARVEARGDVVEGRQQG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E + +D    +  +         P++W +E   FFRLS YQ   +    + P+F
Sbjct: 123 WYCVACEEFKDDPHEAQDPE---CPTHRRPLEWRDEVNLFFRLSRYQA-EIEALIAQPDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-------- 238
           I P  RR EV +FV  GL+D S+SR    WGI +P  P +  YVW DAL  Y        
Sbjct: 179 IQPPSRRREVENFVAQGLRDFSISRIDLPWGIPVPGHPGHTFYVWFDALLGYLSALLAAD 238

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            +      + D    + WPA LHVIGKDILRFHA+YWPA LLSA LPLP++VF HGF+  
Sbjct: 239 GSGPPGPVDLDALLQRGWPAQLHVIGKDILRFHAVYWPAMLLSAGLPLPRQVFGHGFLTR 298

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G+K+ KSLGNV+DP  ++E  G D +R++L+R+I  G DG + +      VN DLAN I
Sbjct: 299 EGQKMGKSLGNVLDPEVLLERCGRDPVRWYLLRDIPFGDDGDFQQQRFTDLVNNDLANTI 358

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R+ SM  K +DG +P  G  +  D  +        ++    ++     RA   V+
Sbjct: 359 GNLLNRTSSMARKWFDGAVPPAGEASAGDHPLAQATRLAGEQACAGLERLDFRRAAEAVL 418

Query: 419 SLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            L +  + Y + Q PW+  K        +  LY  +E  R +A+LL   VP+L+ ++   
Sbjct: 419 QLATAANGYLNDQAPWKRMKLPDQETGVAADLYAVLEATRSVAVLLAPLVPELSARMLHQ 478

Query: 477 LFVADENRCFQSLDQRLKPGF 497
           L +   +     +  + K   
Sbjct: 479 LGLEPFDSAASGVAAQPKAAT 499


>gi|291295734|ref|YP_003507132.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470693|gb|ADD28112.1| methionyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 628

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 198/510 (38%), Positives = 281/510 (55%), Gaps = 17/510 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y + AI Y NA PHIGH YE II D LARFHRLDG +  F TGTDEHG+KIA+AA+NAG
Sbjct: 5   FYETAAIDYANAAPHIGHVYEKIICDFLARFHRLDGYETNFVTGTDEHGEKIARAAKNAG 64

Query: 67  VTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              + FVD  S   F+     L ISYDD+IRTT +RH    + + +K+ + GDIY   Y 
Sbjct: 65  QEPQAFVDYVSEQLFQPAYRRLLISYDDYIRTTSERHKRYVQEILRKVYEAGDIYYAEYE 124

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G YS+  E +  + E+  G           P    +E  YFFR+  Y+  L+ Y   HP+
Sbjct: 125 GLYSVGSERFVTEKELVNG----VLPGDSEPPILRKEANYFFRMEKYRPWLIEYLSEHPD 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            I P   RNEV+  +K  + DLS+SR      WGI IP D  ++ YVW DAL  Y +   
Sbjct: 181 LIQPQAYRNEVLEMLKEPIGDLSISRPKDRVPWGIPIPWDENHVTYVWFDALLAYAS--- 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
                 G   KFWP   HVIGKDIL+ HAI+WP  L SA LP+ K++  HG IL   G K
Sbjct: 238 -SLASRGLFEKFWPHAWHVIGKDILKPHAIFWPTMLKSAGLPIYKRLVVHGHILAMDGRK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN +DP+ ++++ GVDAL Y L+R+   G D  + ++ + +R+N+DLAN +GNL+
Sbjct: 297 MGKSLGNAVDPLALLDKYGVDALHYALLRDTTLGSDSPFGEEVVAQRLNSDLANDLGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR  +M+LK   G+IP P +    D  +      +  ++R+ +    IH AL +V+  V 
Sbjct: 357 SRVRTMLLKYCGGIIPAPSS---PDSEVARAGVALAGKVRKEVDALRIHLALEEVLQYVR 413

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++++ +  KPWEL +           LY  VE +R  ++LL+  +P  A ++   L + 
Sbjct: 414 GLNKFINDVKPWELARDPGRQKELEDALYTAVEGLRIASVLLEPALPTKAKELRAALGLG 473

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D              G  + +    +FP+ 
Sbjct: 474 DYTLEQTETWGLSPAGTRIPEEAPILFPKL 503


>gi|315638476|ref|ZP_07893653.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481467|gb|EFU72094.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 626

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 192/507 (37%), Positives = 304/507 (59%), Gaps = 12/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G   LF TGTDEHGQKI +AA+N   
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNKNH 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K + D+ S  F+ + D  +ISYD + RTT++RH    + ++ K+ +KGDIYKG Y G+
Sbjct: 63  SPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYEGY 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    + +         + ++EE YFFRLS Y+  +L +YES P  I
Sbjct: 123 YCVSCESFFTQSQL---INQKCCPDCGKETRLLKEESYFFRLSKYEKDILKWYESEP--I 177

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++ E+++F+++GLKDLS++R +F+WGIKIP   +D ++I+YVW+DAL  Y+++   
Sbjct: 178 VPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHIIYVWLDALFIYISSL-- 235

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +       F PA +H++GKDILRFHAIY+PAFL+SA+LPLPK + +HG+    GEK+S
Sbjct: 236 ELDEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKHIAAHGWWTRDGEKMS 295

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN + P  + +  G++A RYFL+RE+  G DG + +  L  R+NA+L+N  GNL++R
Sbjct: 296 KSKGNALYPKIIADAYGLEAFRYFLLREVPFGNDGDFSETMLINRINAELSNEFGNLLNR 355

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M LK  +G I          ++ L   +  LQ   E ++N   +R L ++   +S  
Sbjct: 356 IIGMSLKYSNGNILQDEVLN-FYKAELKEANLHLQNALEFIENFQFNRYLEELFKALSVA 414

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N   +A+ ++ +   ++ ++++LL   +PK   K+   L      
Sbjct: 415 NLSISKYEPWNLIKANETSKANALVSLCANILARVSLLLHPALPKSTQKVAKALSFDITL 474

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +Q L    +         + +FP+ 
Sbjct: 475 QNYQKLILNDELLNFKANACEALFPKI 501


>gi|297569842|ref|YP_003691186.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925757|gb|ADH86567.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 510

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 192/509 (37%), Positives = 282/509 (55%), Gaps = 10/509 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            LY++T I Y NAQPH+GHAY  ++AD ++RF+RLDG +V   TGTDEHG KIA+AA  A
Sbjct: 2   TLYLTTPIFYVNAQPHLGHAYTAVVADTVSRFNRLDGREVFLQTGTDEHGDKIAQAAATA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   + +VD+ S  FR     L +  D+FIRTT+  H    + + +K+ D+GDIY   Y 
Sbjct: 62  GTEARDYVDRISAMFRAAWPPLLVEPDNFIRTTDPHHVAVVQQILQKVYDRGDIYFSDYD 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG+  +    P + + E+ YFF +S YQ  L+ + +++PE
Sbjct: 122 GLYCKGCERFLTEKELV---DGKCPDHLTAP-EQVAEQNYFFAMSRYQQWLIDHIKANPE 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV+SF+   L+DL +SR      WGI +P D +++ YVW DAL NY++  G
Sbjct: 178 FITPERYRNEVLSFLSEPLEDLCISRPVSRLAWGIPLPFDQRFVTYVWFDALINYVSGIG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D P    A+ W    H+I KDIL+ HAI+WP  L +  L   +++  HG+      K+
Sbjct: 238 YPDGP--DFARRWAGAEHLIAKDILKPHAIFWPTMLKAMGLEPYRRLHVHGYWNVGETKM 295

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+ P E++   G D +RYFL+RE++ G D  Y  + +  R N+DLAN +GNL +
Sbjct: 296 SKSIGNVVRPEEMVAAFGADTIRYFLLREMSFGLDSSYSDEAVLARRNSDLANDLGNLFA 355

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++M+    D  +P PG   + D  +      +L E R  MQ     +AL  V  ++  
Sbjct: 356 RSLTMVKNFADSQVPAPGPLNDEDRELRDAALAMLAEYRRQMQAWSFRQALEAVWEVIGR 415

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +RY     PWEL K      R +TVL   +E +R +   L+  +P  A K+   L +  
Sbjct: 416 ANRYIVHNAPWELAKDPAQAQRLATVLNTLLETLRCITCALKPVMPAAAGKMSLALGLPP 475

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E R  +     L P        + +FPR 
Sbjct: 476 EGRLAEQQSWGLLPVGNTVTLGENMFPRI 504


>gi|116074880|ref|ZP_01472141.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068102|gb|EAU73855.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 514

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 187/512 (36%), Positives = 272/512 (53%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G  Y  +  D LARF RL+G DV+F TG DEHGQKI + A + 
Sbjct: 2   TYSLTTPLYYVNDKPHLGSTYTTLACDALARFQRLEGNDVVFITGVDEHGQKIQRTAADR 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D  ++ +  +     IS D F+RTTE+RH       +K+    GDI  G  +
Sbjct: 62  GVTPQEHCDAITKRYISLWSDWGISNDRFVRTTEERHLPLVEAFFKRCEANGDIRIGRQT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++      A   Y       ++W +EE  FF LS +QD  +    S P+
Sbjct: 122 GWYCVGCEEFKDE---PPEAKDPYCPIHQKALEWRDEENLFFCLSNFQD-KIEQLISQPD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RR E+ +FV  GL+D S+SR    WG+ +P  P +  YVW DAL  YLT     
Sbjct: 178 FIAPANRRKEIQNFVAGGLRDFSISRVNVSWGLPVPGHPGHTFYVWFDALLGYLTALLDD 237

Query: 246 DNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                        WPA +HVIGKDILRFHA+YWPA L+SA LP+P +VF HGF+  +G+K
Sbjct: 238 GGTVDLDRLASVGWPAQMHVIGKDILRFHAVYWPAMLMSAGLPVPARVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPELLLERCGTDAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +   +P  G    +D  +       + ++R+ M +    RA   V+ L  
Sbjct: 358 NRTASMARKWFGDAVPQAGTAIATDHPLRQHAEAAIGQVRDAMPDMAFQRASEAVLQLAI 417

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + + Y + + PW L K     D   + LY  +E  R + +LL   VP L+ +I + L   
Sbjct: 418 QANGYLNERAPWSLMKQPGQEDAVGSDLYAVLECCRIVGLLLNPLVPDLSERILNQLGQH 477

Query: 481 DENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
                +    +  +L     L K  +P+  R 
Sbjct: 478 TMPEQWHDALIWGKLPSEQPLPKP-NPVMQRL 508


>gi|94266428|ref|ZP_01290123.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93452970|gb|EAT03469.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 201/510 (39%), Positives = 291/510 (57%), Gaps = 12/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            LY++T I Y NAQPH+GHAY  ++AD +ARF RLDG +V F TGTDEHG KI  AA+ A
Sbjct: 2   TLYLTTPIFYVNAQPHLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKIVGAAKEA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V  + +VD+ S  FR    +L++  D+FIRTT+  H +  + + +++  +GDIY   Y+
Sbjct: 62  EVDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDYA 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG+  + Q  P +  E+  YFF++S YQ  L+ + + HPE
Sbjct: 122 GLYCRGCERFLTEKELV---DGKCPDHQVAPAEIREQ-NYFFKMSRYQQWLIDHIKEHPE 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV+SF+   L DL +SR     +WGI +P D  ++ YVW DAL NY++  G
Sbjct: 178 FITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D P    A  W A  H+I KDIL+ HAI+WP  L +  LP  +++  HG+      K+
Sbjct: 238 YPDAP--DFAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYWNVNEAKM 295

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+ P +++E+ G D +RYFL+RE++ G D  Y  + +  R NADLAN +GNL S
Sbjct: 296 SKSIGNVVRPQDMVEQFGADTVRYFLLREMSFGLDASYSDEAVLARRNADLANDLGNLFS 355

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++M+    D  +PTPG  TE D+ +   C  +L      M+     +AL  V  ++  
Sbjct: 356 RSLTMVKNFADSRVPTPGTLTEEDQELADACLAMLDSYGRQMREFAFRQALEAVWEVIGR 415

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +RY     PWEL K     +R +TVL   +E +R +A  L   +P  A K+   L +A 
Sbjct: 416 ANRYIVTNAPWELAKDPGQQERLATVLNTLLETLRCIATTLGPVMPGAATKMAAALPLAA 475

Query: 482 ENRCF-QSLDQRLKPGFMLHKTFDPIFPRF 510
           E     Q     L PG  +    + +FPR 
Sbjct: 476 ELTLAGQRHWPGLPPGAPVT-VGENLFPRL 504


>gi|301109886|ref|XP_002904023.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262096149|gb|EEY54201.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 727

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 198/511 (38%), Positives = 307/511 (60%), Gaps = 16/511 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE  Y++TAI Y N  PH+GHAYE + +DV+ R+HR+ G DV F TGTDEHGQKIA+ A
Sbjct: 38  SRETFYLTTAIHYTNGLPHMGHAYENVCSDVICRYHRVFGRDVYFLTGTDEHGQKIAQTA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AGVT +  VD+ +  F+ +   L++S ++FIRTT   H    + L+++  DKGD+Y G
Sbjct: 98  EAAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLG 157

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY++R+E +  + E                 + M+E+ YFF++S YQD+L+ + E 
Sbjct: 158 TYEGWYNVREEMFVTETEAQLTD--YKDPTTGTSFKKMQEQSYFFKMSKYQDRLVKHIEE 215

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+F+ P  RR E++  +K  L+DLS SR TF  G+ I +DP++++YVW DAL NYL+  
Sbjct: 216 NPDFLQPEVRRQELLRRLKEPLQDLSASRNTFAHGVPILNDPKHVLYVWFDALANYLSAI 275

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
           GY D P   +A++WPA++H+IGKDI  FH + WP  L+S  +PLPK+VF+HGF+  K G 
Sbjct: 276 GYPDGP---EARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGS 332

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNVIDP  +IE  G+++ RYF+VR    G+D  + +D L    N++LA+ +GNL
Sbjct: 333 KMSKSVGNVIDPYAMIERYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNL 392

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+V++  K  +G++P   A    D         +L+   ++ ++  +  A   +++ +
Sbjct: 393 VHRTVNICKKYSNGVVPLAKADKPFD------IYELLKYSEDSYKDFSLQNACIAIVNTL 446

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + ++Y   ++PW +K+  P     V+   +E I  LA  L A +P+ A  IFD L    
Sbjct: 447 KDTNKYLTEKEPWHMKENEPRLV--VVRTCLEAIYVLAHYLSAIIPQTAQIIFDKLGTPP 504

Query: 482 ENRCFQSLD-QRLKPGFMLHKTFDPIFPRFL 511
                 S +   LKPG  +      +F + L
Sbjct: 505 TTLTALSPEYDNLKPGTEV-SIGGILFNKIL 534


>gi|83320001|ref|YP_424033.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283887|gb|ABC01819.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 509

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 180/512 (35%), Positives = 287/512 (56%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I YD FIRTT+  H +T + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHQNTVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  +++V    +G    +   P Q + E+ YF ++S +Q+ + +      
Sbjct: 123 EGIYCVSCEEFLTNEQV--DENGLCKISNTKP-QLVNEDTYFLKVSQFQEFVQNIL--KS 177

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++    + GLKDLS++R +F WGI I  D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITQDEKHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQKDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I         D+ ++ +  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--NYDQELIDLGIKTIDNYIFNMDQYKISEAIKAVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L +  ++Y + + PW L+K N  +   TVL      I  ++ LL+  +    N + +   
Sbjct: 416 LSNACNKYIEVKTPWNLEKENKIEELKTVLSTLQRNIAIISYLLKPVLVDSYNDMIEQCG 475

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + +  F +L       F        IF R 
Sbjct: 476 LENVDINFDNLKTFFNIKFNKLDNKKVIFNRI 507


>gi|237752716|ref|ZP_04583196.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376205|gb|EEO26296.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 657

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 208/516 (40%), Positives = 315/516 (61%), Gaps = 15/516 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI++ I Y N  PHIGHAY  II D LARFHRL G  V   TGTDEHGQKI ++A+  
Sbjct: 4   KFYITSPIYYVNDIPHIGHAYTTIIVDTLARFHRLKGNSVFCLTGTDEHGQKIEQSAKKM 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   K +VD  S+ F+D+ D  DI+YD FIRTT+  H  + + ++ K+ +KGDIYKG Y 
Sbjct: 64  GQDPKNYVDSISKRFKDLWDSFDIAYDYFIRTTDSTHLQSAQYVFLKMYEKGDIYKGEYE 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++    +             ++EE YFF+LSAY ++LL +Y+ +P+
Sbjct: 124 GNYCISCESFFAKSQLMSEKN---CPDCGKETTLLQEESYFFKLSAYAERLLKFYDENPD 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--------PDDPQYIMYVWIDALTN 237
           FILP  RRNEVISFVKSGL+DLS++R +FDWGIK+        P++ +++MYVW+DAL N
Sbjct: 181 FILPKSRRNEVISFVKSGLEDLSITRTSFDWGIKLPKELLENNPNNQKHVMYVWLDALVN 240

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YL+  G+  N   +K  FWPA+ H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+  
Sbjct: 241 YLSALGF-HNDLPNKMDFWPANFHIVGKDILRFHAIYWPAFLMSLDLPLPKHIAAHGWWT 299

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKS+GNV++P EV++  G+D  RYF++RE+  G+DG + +  L +R+NADL N 
Sbjct: 300 KDGAKMSKSIGNVVNPKEVVDAYGLDTFRYFILREVPFGQDGDFSQSALIERINADLGND 359

Query: 358 IGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL++R + M  K ++            +    L     +L+ +  ++    I+R L +
Sbjct: 360 LGNLLNRLLGMGAKYFNNKLKADLSELKSTYCDELVQIQTILESLESHINEVQINRYLEE 419

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +  L S  +     ++PW+L K N     + +L +   ++ + A+ L   +PK A+KI  
Sbjct: 420 LWKLFSLGNGIIAKKEPWQLIKDNKHTEVAQLLLLLANILLKAALFLSPCMPKSADKILK 479

Query: 476 ILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRF 510
           +  +     CF+    + +    ++ +    +FPR 
Sbjct: 480 VFGLNANTECFKRFITQGEILDSVILEPTPALFPRI 515


>gi|154320610|ref|XP_001559621.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
 gi|150853466|gb|EDN28658.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
          Length = 579

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 190/530 (35%), Positives = 294/530 (55%), Gaps = 23/530 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  Y++T I Y NA PH+GH Y M++ADV  R+  L G   +  TGTDEHG KI +A
Sbjct: 44  KSKKPFYVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKGNTAILCTGTDEHGMKIQRA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG   K F D  +  F+++A    +S D F+RTT+  H +T   +W  + ++  IY+
Sbjct: 104 AAQAGALPKEFCDIGAETFKELAKRAGLSNDHFVRTTDPDHKETVEYIWYMLREREYIYE 163

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQY------YNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWY + DE +Y +  + K  D                V+W  E+ Y FRLSA++D+
Sbjct: 164 SKHEGWYCVSDETFYPESAIEKRLDPFTGRTFIASQETGKEVEWTSEKNYHFRLSAFKDQ 223

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +YE +P+F++P+ R  +V++ V  GL+DLS+SR      WGI++PDD    +YVW+D
Sbjct: 224 LLEFYEKNPDFVVPLTRMKDVVNQVSRGLEDLSISRPYDRLSWGIRVPDDETQTIYVWLD 283

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P    A  WPAD+ VIGKDI+RFH IYWPAFLL+ NLP PK++ +H
Sbjct: 284 ALVNYITKAGYPWAPGKETAGGWPADVQVIGKDIVRFHCIYWPAFLLALNLPPPKQILTH 343

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  +K+SKS+GNV++P+  ++  GVD +RY+L+ +    +D  Y  + + +R    
Sbjct: 344 AHWTMDNQKMSKSIGNVVNPLFAMDRFGVDVMRYYLIHDGGIKEDSDYGNEYIVERYKKG 403

Query: 354 LANGIGNLVSRSVS---MILKDYDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQ 408
           L  G+GNLVSR        ++       + G+   +  +I  +   + V  +  E MQ  
Sbjct: 404 LQQGLGNLVSRLTRPKVWNVRSCVEATHSQGSNNSNSTTIRQIDFLNSVRDKANEKMQEL 463

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQA 464
               AL  ++  V E ++Y   + PW L K+      +R  + +Y + E IR + ILLQ 
Sbjct: 464 NAGAALHVIMDTVYETNKYIQHEAPWSLAKSEDPEAKERLISAVYHSAEAIRIVGILLQP 523

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGF-----MLHKT-FDPIFP 508
           ++P+ A+ + D++ V  E R ++       P +      L K  +D +FP
Sbjct: 524 YMPEKASLLLDMIGVLPERRTYEYAILGADPSYGDAQAPLGKGAWDGLFP 573


>gi|82245502|sp|Q90YI3|SYMM_TAKRU RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|15020809|emb|CAC44631.1| putative methionyl tRNA synthetase [Takifugu rubripes]
          Length = 590

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 193/536 (36%), Positives = 286/536 (53%), Gaps = 31/536 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E    YI+T I Y NA PH+GH Y  +IAD   R  +L G +  F TGTDEHG KI +A
Sbjct: 39  TENRNYYITTPIFYVNASPHLGHLYSAVIADCFHRHKQLQGFNSRFATGTDEHGLKIQQA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG     F    S  FR +    +IS  D+IRTTE+RHH   +  W  +  KG IYK
Sbjct: 99  AEAAGKEPLEFCTTVSERFRHLFSSCNISNTDYIRTTEQRHHRAVQHFWSVLCSKGLIYK 158

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS +DE++    +V       G + +      + V+WM+EE Y FRLS ++ +L
Sbjct: 159 GSYEGWYSTQDESFLTPSQVTTALDSTGKEIKVSLESGHKVEWMKEENYMFRLSGFRSQL 218

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L +   +P  I P    + V+ +++  L DLS+SR+     WGI +P+D    +YVW+DA
Sbjct: 219 LDWLRENPRAIQPERFHHSVLQWLQEELPDLSVSRQKSRLQWGIPVPEDDGQTIYVWLDA 278

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY +N      ++W    H+IGKDIL+FHAIYWP+FLL A LPLP+ +  H 
Sbjct: 279 LVNYLTVVGYPNNH----ERWWNVAHHIIGKDILKFHAIYWPSFLLGAGLPLPQTIHVHS 334

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKSLGNVIDP E  +    D LRYFL+R+     D  Y  D + K +NA+L
Sbjct: 335 HWTVAGKKMSKSLGNVIDPQERSQLFTTDGLRYFLLRQGVPDTDCDYRDDKVVKLLNAEL 394

Query: 355 ANGIGNLVSRSVSMILKD---YDGMIPTP------GAFTESDESILSVCSRVLQEIRENM 405
           A+ +G L++R  +  L     Y    P        G   + D  +L     +   + ++ 
Sbjct: 395 ADALGGLLNRCTATALNPAQVYASFCPDSFPRERGGRADDDDYRMLESVRHLPAVVEQHF 454

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWEL-KKTNPDR--ASTVLYVTVEVIRQLAILL 462
           ++  +++AL  V + V + + +     PW+L +K + D+    T+++V++E +R    LL
Sbjct: 455 EDMHVYKALEAVSTCVRQTNGFVQRHAPWKLDRKDSADQRWLGTIIHVSLECLRIYGTLL 514

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
           Q  VP+++NK+   L V    R + +L+   +         G  L      +F R 
Sbjct: 515 QPVVPEISNKLLSRLGVQPHERSWTNLNFLPRFEGKDCPFEGRALGSDSGVLFSRL 570


>gi|307106870|gb|EFN55115.1| hypothetical protein CHLNCDRAFT_31569 [Chlorella variabilis]
          Length = 598

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/520 (36%), Positives = 277/520 (53%), Gaps = 18/520 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   ++T + Y NA PH+G AY  I AD LARF RL G  V F TGTDEHG+KIA AA  
Sbjct: 61  QPFTVTTPLYYVNAAPHMGSAYPTIAADALARFQRLQGRRVTFITGTDEHGEKIALAAAA 120

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K   D    +++ +   LDI YD FIRTT+ RH      + +++  +GDIYK  Y
Sbjct: 121 RGMAPKEHCDDVVASYKQLWRDLDIGYDSFIRTTDARHEALVVSVLERVWQRGDIYKADY 180

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE-SH 183
            G Y +  E Y ++ ++    +         P    +EE YFF LS YQ +L        
Sbjct: 181 EGHYCVDCEEYKDEADMDADKN---CPVHRKPCVERKEENYFFALSKYQAQLEELCSSPG 237

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY----- 238
             F+ P  RRNEV+ +VKSG++D S+SR   +WGI IP DP+  +YVW DAL  Y     
Sbjct: 238 TCFVQPESRRNEVLGWVKSGVRDFSISRAAVEWGIPIPRDPKQTVYVWFDALNGYLSGLL 297

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
                   +P+   A  WPA LH+IGKDILRFHA+YWPA LLSA LP P +V+ HGF+  
Sbjct: 298 PEGAAADASPEALAAAGWPASLHIIGKDILRFHAVYWPAMLLSAGLPPPDRVYGHGFLTK 357

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+ KSLGNV++P  ++   G DA+RY+ +REI  G+DG + ++  +  VNA LAN +
Sbjct: 358 DGLKMGKSLGNVLEPRALVGAYGADAVRYYFLREIVFGQDGDFSEERFRNIVNASLANDV 417

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL++R+++++ K+  G +P   A   +D  + ++ +     + +        +A    +
Sbjct: 418 GNLLNRTLNLLRKNCGGEVPLDAADVAADHPLRALAAEKAPAVADAFARLRFDQACEAAL 477

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           S+    ++Y +   PW   K   +        VL   +E +R +A+LL    P L+ +I+
Sbjct: 478 SISGRGNQYLEETAPWTAFKKGSEEQRAEAAAVLAAVLEAVRVVAVLLSPVTPSLSARIY 537

Query: 475 DILFVADEN---RCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
             L    E      +   +   LK G    +   P+  R 
Sbjct: 538 QQLGFTPEQHQALTWADTEWGALKQGHATPQPV-PVMQRL 576


>gi|294054396|ref|YP_003548054.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613729|gb|ADE53884.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 511

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 184/516 (35%), Positives = 294/516 (56%), Gaps = 22/516 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+TAI Y N  PH+GHAYE ++ D++AR+ RL G +V F TG DEHGQK+  +AQ 
Sbjct: 3   KKFYITTAIDYANGSPHLGHAYEKVLTDIVARYRRLMGDEVKFLTGLDEHGQKVQMSAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   D+ +  F+ +   L IS DD+IRTT+ RH    + + + + DKG+IYK  Y
Sbjct: 63  EGIAPQEICDRLAVEFQGVCGRLHISNDDYIRTTQARHKKVVQEILQTLYDKGEIYKAEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+YS R E +  + E   G     +      V+ + E  YFF+L+ YQ+ L+ + +S+ 
Sbjct: 123 SGYYSQRQEQFVTEKEKVNGE----WPEIFGEVEEVIETNYFFKLAQYQEWLVDFIQSNE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           + I P  R  +V+ F+K  L DL +SR     +WGI++P D  ++ YVW DALTNY+T  
Sbjct: 179 DLIYPRFRSADVLQFLKEPLNDLCISRPKSRLEWGIELPFDTDFVTYVWFDALTNYITAA 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY        A+ WPAD HVIGKDI +  HA+YWP  L + ++ LPK    HG+ L  G 
Sbjct: 239 GY---GTEEFAQHWPADYHVIGKDILVPPHAVYWPIMLKALDIELPKHFLVHGWWLSSGA 295

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS G+V++P+++IE+ G DA RYF+ RE+  G+D  +  D    R N+DLAN +GNL
Sbjct: 296 KMSKSTGDVVNPLDLIEQFGADAFRYFVTREMNVGQDSEFSLDLFMSRYNSDLANDLGNL 355

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR ++M  +  +  +P        ++ +  +      E++   ++   H+AL ++   +
Sbjct: 356 VSRLLNMGGRYTEAKVPAASVNEAPEQELKKLWEATKDELQPLFESFQFHKALERIFGFI 415

Query: 422 SEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           S +++Y + + PW+L K     +  R  T L    E +R   ++L   +P +++++  ++
Sbjct: 416 SGINKYAETRAPWKLAKSEAPEDRARLETSLAYMAEALRLGVVMLTPVMPDISDRVRALI 475

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTF----DPIFPR 509
              +    F+ +D +L+ G  L          +FPR
Sbjct: 476 GATN----FERIDGQLEWGETLAGQALGEKTILFPR 507


>gi|94263063|ref|ZP_01286882.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456606|gb|EAT06714.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 201/510 (39%), Positives = 291/510 (57%), Gaps = 12/510 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            LY++T I Y NAQPH+GHAY  ++AD +ARF RLDG +V F TGTDEHG KI  AA+ A
Sbjct: 2   TLYLTTPIFYVNAQPHLGHAYTGVVADTVARFARLDGEEVFFQTGTDEHGDKIVGAAKEA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V  + +VD+ S  FR    +L++  D+FIRTT+  H +  + + +++  +GDIY   Y+
Sbjct: 62  EVDLREYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDYA 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + E+    DG+  + Q  P +  E+  YFF++S YQ  L+ + + HPE
Sbjct: 122 GLYCRGCERFLTEKELV---DGKCPDHQVAPAEIREQ-NYFFKMSRYQQWLIDHIKEHPE 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   RNEV+SF+   L DL +SR     +WGI +P D  ++ YVW DAL NY++  G
Sbjct: 178 FITPERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIG 237

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y D P    A  W A  H+I KDIL+ HAI+WP  L +  LP  +++  HG+      K+
Sbjct: 238 YPDAP--DFAPRWAAAEHLIAKDILKPHAIFWPTMLRAMGLPPYRRLHVHGYWNVNEAKM 295

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+ P +++E+ G D +RYFL+RE++ G D  Y  + +  R NADLAN +GNL S
Sbjct: 296 SKSIGNVVRPQDMVEQFGADTVRYFLLREMSFGLDASYSDEAVLARRNADLANDLGNLFS 355

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS++M+    D  +PTPG  TE D+ +   C  +L      M+     +AL  V  ++  
Sbjct: 356 RSLTMVKNFADSRVPTPGTLTEEDQELADACLAMLDSYGRQMREFAFRQALEAVWEVIGR 415

Query: 424 VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +RY     PWEL K     +R +TVL   +E +R +A  L   +P  A K+   L +A 
Sbjct: 416 ANRYIVTNAPWELAKDPDQQERLATVLNTLLETLRCIATTLGPVMPGAATKMAAALPLAA 475

Query: 482 ENRCF-QSLDQRLKPGFMLHKTFDPIFPRF 510
           E     Q     L PG  +    + +FPR 
Sbjct: 476 ELTLAGQRHWPGLPPGAPVT-VGENLFPRL 504


>gi|168702118|ref|ZP_02734395.1| Methionyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 531

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 195/528 (36%), Positives = 307/528 (58%), Gaps = 28/528 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ + + +TAI YPN++PHIG A+E + ADV AR+ R++G DV F  G DE+  K+A 
Sbjct: 1   MTDKPRWFQTTAIDYPNSRPHIGTAFEKLGADVQARYRRMEGYDVFFLMGNDENTLKVAD 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G   + + D  +R FR++ D LDISYD F++T+ +RH   CR   +K+ D G IY
Sbjct: 61  RAKSLGQEPQAYCDDMARQFREVWDALDISYDTFVQTSHERHKQCCRKFVQKVYDNGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y GWY    E + +D        G        P+    E  +FF+LSA++D+LL + 
Sbjct: 121 KGSYEGWYCPGCEEFKSDK--VHAESGGLCPNHKRPLVRRSEPCWFFKLSAFKDRLLEHL 178

Query: 181 ESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + +PEF+ P  RRNE+I F++  GL+DL++SR   +WGIK+P DP++ +YVW DAL  Y+
Sbjct: 179 KGNPEFVQPESRRNEMIGFIEAEGLQDLNISRHGEEWGIKLPFDPEFTIYVWFDALLTYI 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + + +  K WPAD+H IGKDI RFH   WPA L +A    P+KVFSHGF+ + 
Sbjct: 239 TGIGY-GDDEATFRKHWPADVHFIGKDITRFHTHIWPAMLWAAGEEAPRKVFSHGFVNNN 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+ K+LGN++DP+E+I +   DA RY+ +RE     DG Y     ++  N++LAN +G
Sbjct: 298 GQKMGKTLGNIVDPMEIIAKSNADAYRYYFMRECPFPSDGDYSGQRYEEVYNSELANNLG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQLIHRA 413
           N++SR +++  K+++G+       T        D  +       + E+RE+++    + A
Sbjct: 358 NMLSRELTITFKNFEGVFTGTAGVTPDPVVPGLDLKLF------VGEVREHVEACRYNLA 411

Query: 414 LAQVI-SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L +++   ++  ++Y +A  PW+L KT+ D A  VL+  V+ +R  +ILL+ F+PK A  
Sbjct: 412 LQKIVQDFLTPTNQYLEANAPWKLVKTDKDAAKKVLFNAVQSLRIASILLKPFIPKSAEA 471

Query: 473 IFDILFVA----------DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I+                      Q+ D R+    ++     P+FPR 
Sbjct: 472 IYTSFNFPTPWAEVKYADAAELKAQADDLRITA-ELIDGKLKPLFPRI 518


>gi|33303707|gb|AAP22261.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 190/417 (45%), Positives = 283/417 (67%), Gaps = 8/417 (1%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   +T + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + +
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 141 -VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            V    +G       +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+N
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRKN 180

Query: 195 EVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           E+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    
Sbjct: 181 EMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKYK 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP
Sbjct: 241 KFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K +
Sbjct: 301 VTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYF 360

Query: 374 DGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           +G IP      TE DE++++     L+++ E M+N     AL  +  LVS  ++Y D
Sbjct: 361 NGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKYID 417


>gi|110004172|emb|CAK98510.1| probable methionyl-trna synthetase transmembrane protein
           [Spiroplasma citri]
          Length = 526

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 199/517 (38%), Positives = 295/517 (57%), Gaps = 14/517 (2%)

Query: 1   MKEREK-LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + +K  Y++T I YP+AQ HIGHAY   +AD+L R+ ++ G +  F TG+DEHG+KI 
Sbjct: 1   MSQNKKLFYVTTPIYYPSAQLHIGHAYTTTLADILNRYKKMAGYETFFLTGSDEHGEKIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           K A+ AG+T   F+     NF+ + + L I Y  FIRTT+K H    + ++ K+ + GDI
Sbjct: 61  KKAKTAGITPYQFITMIVDNFKLLWNKLGIEYSKFIRTTDKEHEVGVQKIFSKLYNNGDI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y G Y G Y +  E +  + ++ K  +        N  Q ++EE YFF++S Y   L++Y
Sbjct: 121 YLGEYEGLYCVSCEEFLTEAQIDKITN--QCLVCGNKPQKVKEETYFFKVSKYSQFLINY 178

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           Y +HP FI P  R+NE+++     GL DLS++R TF WGIK  ++ ++I+YVWIDAL+NY
Sbjct: 179 YNNHPGFIEPEARKNEMLNNFILPGLTDLSVTRTTFSWGIKTLENDKHIIYVWIDALSNY 238

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           LT  GYL N D    KFW       L ++GK+I RFH IYWP+ L S  L  P K+ SHG
Sbjct: 239 LTALGYLSNDDALFNKFWNNPDVEILQLLGKEIARFHTIYWPSMLESLGLRQPNKLLSHG 298

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +IL K  K+SKS+GNV+DP+ +I++ G D LR++L  EI    DG +  +   +  NA L
Sbjct: 299 WILFKDTKMSKSIGNVVDPLYLIDKYGRDTLRFYLGYEIPTENDGKFSYEMFLESYNAHL 358

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N IGNLVSR  +MI K ++G +         D  ++  C + +Q  ++ M    I   L
Sbjct: 359 VNNIGNLVSRVSNMISKYFNGQLVKQQQL---DNVLIESCVQAVQNYQQAMDAYQISEGL 415

Query: 415 AQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + ++ L ++ ++Y +  KPWEL+K  N ++    L      I   A LLQ  +   A KI
Sbjct: 416 SMILELCNKANKYIEENKPWELEKNKNMEQLHETLASLAYTIIVSAFLLQPVLVDNAQKI 475

Query: 474 FDILFVADENRCFQS-LDQRLKPGFMLHKTFDPIFPR 509
            D   V   N  F++ L Q +     + K  + +F R
Sbjct: 476 ADYFNVNLTNLTFKTILMQEIIYNKTIEKK-ENLFNR 511


>gi|291277617|ref|YP_003517389.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964811|emb|CBG40667.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 639

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 198/510 (38%), Positives = 296/510 (58%), Gaps = 16/510 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y N  PHIGHAY  I+AD+L +++ L G +    TGTDEHGQKI ++AQ  
Sbjct: 2   KKFITTPIYYVNDVPHIGHAYTNILADMLKKYYTLLGEETFLLTGTDEHGQKIEQSAQKK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T K + DQ S+ FR++ D   I YD F+RTT+  H    +  + K+  KGDIYKG Y 
Sbjct: 62  HQTPKAYADQISQEFRNLWDYFGIDYDHFVRTTDASHIKGVQEAFSKMYQKGDIYKGEYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   ++  G               ++EE YFF LS YQDKLL +Y    +
Sbjct: 122 GNYCISCESFFAPSQLLDGK----CPDCGRNTNLIKEESYFFALSKYQDKLLQWY-EKSD 176

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---PQYIMYVWIDALTNYLTTT 242
            I P  R+NEVI+FVK+GL DLS++R +F WGI +P D   P++I+YVW+DAL NY+T  
Sbjct: 177 CIFPRFRKNEVINFVKNGLNDLSITRTSFAWGIPLPKDLQEPRHIIYVWLDALLNYITAL 236

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D        FW   + ++GKDILRFHAIYWPAFL+S  LPLPK + +HG+ L +G+K
Sbjct: 237 GYPDANFQKD--FWENAIQIVGKDILRFHAIYWPAFLMSLELPLPKVICAHGWWLIEGKK 294

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV++P EV E+ G++ LRYFL+RE++ G DG + K  L +R+N DLAN +GNL+
Sbjct: 295 MSKSLGNVVNPKEVGEDYGIEHLRYFLLREVSFGNDGNFAKKSLAQRINTDLANDLGNLL 354

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR++ M  K +   +    +  E  + I  + +R+       M        L ++  + +
Sbjct: 355 SRTLGMAEKYFALHLSGEFSLYEEKKQIEQILARL----EPLMNEIQPSSYLEELWKIFT 410

Query: 423 EVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +      +PW L K    +A +++L V   ++ + A+ L   +P+ A KI  +  +  
Sbjct: 411 LANSLIPKYEPWNLMKQGQIKATASLLLVIGNILIKGALCLYPIMPETAQKILSVFGIEA 470

Query: 482 ENRCFQS-LDQRLKPGFMLHKTFDPIFPRF 510
               +   + +R     +  K  + +FP+ 
Sbjct: 471 TAANYAKYITKRHWEADLRLKKIEALFPKI 500


>gi|39938719|ref|NP_950485.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39721828|dbj|BAD04318.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 520

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 203/514 (39%), Positives = 298/514 (57%), Gaps = 14/514 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K ++STAIAY +  PHIG+ YE I+AD +ARF RL+G DVLF TGTDEHGQKIA  A
Sbjct: 7   QKPKFFLSTAIAYASGIPHIGNVYESILADAIARFKRLEGFDVLFQTGTDEHGQKIAAKA 66

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G   + +VDQ S   + + D++ +SYD F +TT   H  T + ++ K+  +GDIY G
Sbjct: 67  LQQGKNPQEYVDQISLEIKRIYDLMQVSYDKFAKTTNPHHKQTVQAIFYKLWQQGDIYLG 126

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G YS+ +E+Y    ++  G           P+  + EE YFF+LS YQ +LL Y E+
Sbjct: 127 KYQGLYSVAEESYVAAKDLIDGKT----FNGETPI-LISEETYFFKLSKYQAQLLQYLEN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P  I P  +R E+++ +K  L DLS+SR +F WGI +P DP++++YVWIDAL+NYLT  
Sbjct: 182 NPSLIKPDAQRKELLNLLKEPLADLSVSRTSFKWGIPVPFDPKHVIYVWIDALSNYLTGL 241

Query: 243 GYLDNPDGS-KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            Y      S   ++WP D+HVIGKDILRFH IYWP  L++  + LPK+  +H +IL    
Sbjct: 242 DYNPTSKNSQFNRYWPCDMHVIGKDILRFHLIYWPILLMALEISLPKQFLTHPWILFDKN 301

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+   ++++   VD++RYF++ EI   +DG    + L +R N+DLAN +GNL
Sbjct: 302 KMSKSKGNVLYVDDLLKYFPVDSIRYFVLSEIPYAQDGNITYELLVERHNSDLANVLGNL 361

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           V R   M+       +      T  D    +       L  +R  MQ+  +  +L ++++
Sbjct: 362 VHRVFGMVKSYRQNNLSKTLITTNLDPKFDLSKQALATLPLVRLKMQDCKVGDSLKEIMN 421

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           L    ++Y D  +PW L K NP++       LY  VE +R L +LLQ F+P+ A+KI   
Sbjct: 422 LARFANKYIDLVEPWNLFK-NPEKQQLLDHTLYSLVETLRFLGVLLQPFLPQTAHKILTQ 480

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L  +D    F+SLD            +  +F R 
Sbjct: 481 LKASD--ITFESLDTFGLLSSQKLDNYHILFNRL 512


>gi|317969852|ref|ZP_07971242.1| methionyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 522

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/520 (36%), Positives = 273/520 (52%), Gaps = 20/520 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G AY  +  D LARF RL G +VLF TG DEHGQKI + A+ A
Sbjct: 2   TYTLTTPLYYVNDKPHLGSAYTTLACDALARFQRLKGEEVLFITGCDEHGQKIQRTAEAA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   D  S  +R++ D   IS +  IRTT+ RH    +  + ++   GDI +G   
Sbjct: 62  GLTPQAHCDGVSAQYRELWDRWQISNNRLIRTTDPRHRQVVQQFFARVEASGDIVEGRQQ 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + +D    +  +         P++W +E   FFRLS YQ+  +    S P 
Sbjct: 122 GWYCVACEEFKDDPHEAQDPE---CPIHRKPLEWRDELNLFFRLSRYQE-QIEALISQPG 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P+ RR EV +FVK GL+D S+SR    WGI +P    +  YVW DAL  Y+T     
Sbjct: 178 FIQPVSRRREVENFVKQGLRDFSISRINLPWGIPVPGHEGHTFYVWFDALLGYITALLEE 237

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +        ++ WPA +HVIGKDILRFHA+YWPA LLSA L LP KVF HGF+  +G+K
Sbjct: 238 GDAADLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSAGLSLPAKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP +++E  G DA+R++L+R+I  G+DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPADLLERCGRDAVRWYLLRDIPFGEDGDFQQQRFSDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  + +D  +P       S   +    ++        ++N     A    + L  
Sbjct: 358 NRTSSMARRWFDEAVPPADQARTSTHPLAQAAAQAKDASLAALENLEFRSAAEAALQLAI 417

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             + Y + Q PW L K    R       Y  +E  R +A+L+   +P L+ ++   L   
Sbjct: 418 SANGYLNDQAPWSLMKKEGTREQVANDLYAVLEAARLVALLMAPLLPDLSGRMLHQLGQP 477

Query: 479 VADENRC--------FQSLDQRLKPGFMLHKTFDPIFPRF 510
           + D N           Q     L+ G  L +   P+  R 
Sbjct: 478 IPDSNATAQVSSAWLEQLSWGGLQSGAPLPEP-SPVMARL 516


>gi|330814121|ref|YP_004358360.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487216|gb|AEA81621.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 481

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 216/487 (44%), Positives = 313/487 (64%), Gaps = 15/487 (3%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GHAY  I AD +AR+ RL+G DV F TGTDEHGQKI K+A    ++  VF ++ S+ F 
Sbjct: 1   MGHAYSSISADFIARYKRLEGYDVKFVTGTDEHGQKIQKSADKRKLSPNVFCNEISKVFL 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           D+   L++S  DFIRTTE RHH T + LWK + +K  IY   YSGWYS+ DEA+Y + E+
Sbjct: 61  DLTKTLNLSNTDFIRTTEDRHHKTVQKLWKILEEKKFIYLSKYSGWYSVSDEAFYTESEI 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
            +  + +   A  + V+W+EEE YFF+LS +Q+ L+ +YE +PEFI P  RRNEV+SFVK
Sbjct: 121 IEKDNIKLSVASGSAVEWVEEESYFFKLSQFQNLLIKHYEDNPEFIQPSSRRNEVMSFVK 180

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
            GL DLS+SR +F WGI +P+   +I+YVW+DALTNYLT T Y       +   WPAD+H
Sbjct: 181 GGLNDLSISRNSFKWGISVPNSKDHIIYVWLDALTNYLTATNY-----FDENSSWPADVH 235

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           +IGKDILRFHA+YWPAFLL+A +PLPK +F HG+IL   EK+SKS GN++DPIEV+ E G
Sbjct: 236 IIGKDILRFHAVYWPAFLLAAEIPLPKTIFGHGWILSGDEKMSKSKGNILDPIEVVNEFG 295

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           +D +RY+L++E+  G DG  + D LK  +N+DLAN IGNL  R   +I K +   +P P 
Sbjct: 296 LDEIRYYLMKEVMYGLDGNINIDNLKNCINSDLANNIGNLSQRIFVLINKYFSCKVPDPK 355

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D+  +      ++ +R++M +  IH  + +VIS  S+++++ + ++PW   K + 
Sbjct: 356 PLLKDDQKFMDCP---VEGLRKSMDSFEIHNYIREVISYSSKINKFVNDEEPWTKAKNSD 412

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK------- 494
            R  T+LY+ +  ++ + ILL   +P  +      L V  +N   + +++ L        
Sbjct: 413 PRVGTILYIALNALKNIFILLHPVMPSKSEYYLSCLNVDTKNISLELINKNLPINVELKM 472

Query: 495 PGFMLHK 501
           PG M  K
Sbjct: 473 PGLMFKK 479


>gi|305432137|ref|ZP_07401303.1| methionine--tRNA ligase [Campylobacter coli JV20]
 gi|304444802|gb|EFM37449.1| methionine--tRNA ligase [Campylobacter coli JV20]
          Length = 628

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 197/507 (38%), Positives = 298/507 (58%), Gaps = 11/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PH+GHAY  IIAD LARF+RL G +    TGTDEHGQKI +AA+    
Sbjct: 3   YLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    +             ++EE YFF+LS YQDK+L +Y+     I
Sbjct: 123 YCISCESFFAKSQL---INECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDKEDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGI+IP    D ++I+YVW+DAL  Y+++  Y
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYISSLDY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G++A RYFL+RE+  G DG + +  L  R+N +L N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFSESVLINRINTELGNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M +K   G I   G   E  ++ L      L      ++N   +R L ++   +S  
Sbjct: 357 IIGMSIKYNQGNISQEGVL-EFYKNELDTAKEHLDNAINFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N    A+ ++ +   ++ + ++LL   +PK   K+   L      
Sbjct: 416 NLAISKYEPWNLIKANKIKEANALIGLCANILAKTSLLLSPTLPKSCQKVGLALNFEISP 475

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +Q L  + +         + +FP+ 
Sbjct: 476 TNYQKLILQNELLDFKASACEALFPKI 502


>gi|256371339|ref|YP_003109163.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007923|gb|ACU53490.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 503

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 211/504 (41%), Positives = 300/504 (59%), Gaps = 13/504 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T I Y N  PH+G AY +I+AD +AR+HRL G +V F TGTDEHG KIA++A+  
Sbjct: 3   RFYITTPIFYVNGDPHLGTAYAVILADAIARWHRLIGDEVRFVTGTDEHGLKIAQSAEAH 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ + +VD  S  FR   D L++SYDDFIRTTE RHH + +   ++I D+GDIY G Y 
Sbjct: 63  GVSPQAWVDVTSAQFRRAWDALEVSYDDFIRTTEPRHHRSVQRFLERIHDRGDIYLGTYE 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +R EAYY   E+     G+     H   + M EE YFF LS YQD+LL +YE HPE
Sbjct: 123 GLYCVRCEAYYQPGELEP---GELCPVHHVACERMREENYFFALSRYQDRLLEHYERHPE 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
            I P  RRNEV+ F++ GL D+S++R + DWG+++P D +++ YVW DAL NYLT  GY 
Sbjct: 180 AIWPESRRNEVLRFIEGGLTDISITRTSIDWGVRVPWDSRHVFYVWYDALVNYLTAIGY- 238

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                  A +WPA  H++GKDILRFHA++WPA  L+A +  P ++   G++L++GEK+SK
Sbjct: 239 AEDSAEVAAWWPAAHHLLGKDILRFHAVWWPAMCLAAGIDPPAQLIVTGWLLNEGEKMSK 298

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SL N IDP+ V   +  DALR++LVR  A G D     + L    NA+LANG GNLV+R 
Sbjct: 299 SLANQIDPLGVQRALSADALRHYLVRSSAIGPDWDVSLEALVALYNAELANGFGNLVARV 358

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            S+I++   G +P   A    + +I    +  ++ +R   +    + A+   I LV  ++
Sbjct: 359 GSLIVQRLGGHVPDAPATPPDELAI----AETIEAVRAGWERWRPNDAMDAAIGLVHRLN 414

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +A +PW L K + + A++VL    E  R  ++LL   +P  A +    L   +    
Sbjct: 415 AYLEATEPWRLAKGSAE-AASVLGTAREGARLASVLLSPAIPDGAERARRALGFDEAG-- 471

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPR 509
                Q    G  + K   P+FPR
Sbjct: 472 -PLAWQPGMGGATITKPA-PLFPR 493


>gi|57167838|ref|ZP_00366978.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020960|gb|EAL57624.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 628

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 197/507 (38%), Positives = 298/507 (58%), Gaps = 11/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N  PH+GHAY  IIAD LARF+RL G +    TGTDEHGQKI +AA+    
Sbjct: 3   YLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLTGTDEHGQKIEQAAKIRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    +             ++EE YFF+LS YQDK+L +Y+     I
Sbjct: 123 YCISCESFFAKSQL---INECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDKEDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGI+IP    D ++I+YVW+DAL  Y+++  Y
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYISSLDY 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G++A RYFL+RE+  G DG + +  L  R+N +L N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFSESVLINRINTELGNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M +K   G I   G   E  ++ L      L      ++N   +R L ++   +S  
Sbjct: 357 IIGMSIKYNQGNISQEGVL-EFYKNELDTAKEHLNNAINFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N    A+ ++ +   ++ + ++LL   +PK   K+   L      
Sbjct: 416 NLAISKYEPWNLIKANKIKEANALIGLCANILAKTSLLLSPTLPKSCQKVGLALNFEISP 475

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +Q L  + +         + +FP+ 
Sbjct: 476 TNYQKLILQNELLDFKASACEALFPKI 502


>gi|121706923|ref|XP_001271676.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119399824|gb|EAW10250.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 574

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 192/526 (36%), Positives = 276/526 (52%), Gaps = 22/526 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
            ++  Y++T I Y NA PH+GH Y M+IAD+L R+  L G  +    TGTDEHG KI +A
Sbjct: 51  SKKPYYVTTPIFYVNAAPHVGHFYTMVIADILKRWQVLLGNKNAQLLTGTDEHGMKIQQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG+ T+ F D N + F  +A   +I  D FIRTT+  H +  +  W+ ++ +G IY 
Sbjct: 111 ALAAGMDTQAFCDMNCKTFEALAKAANIDNDHFIRTTDPAHKEAVQYFWEILNHRGYIYT 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA+QD+
Sbjct: 171 SKHEGWYSVSDETFYPPTQVQNSLDPSTGRKRMVSTETGKEVEWSSETNYHFRLSAFQDR 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +Y S  +FI P   + +++  V SGL DLS+SR      WGI +P D    +YVW+D
Sbjct: 231 LLEFYSS-TDFIAPGNYKTDIVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLD 289

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP++V  H
Sbjct: 290 ALVNYLTRAGYPFVPGQESRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRRVLVH 349

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   I+  GVD +R+FL  +     D  YD   + +     
Sbjct: 350 GHWTMNREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAYQGGLVGDADYDNSFIIRDYKKM 409

Query: 354 LANGIGNLVSRSVSMILKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           L  GIGNL  R++            D         T +D+   S+      ++ E M+  
Sbjct: 410 LQWGIGNLAHRTIGCAKGKLRSYIQDAAADKLPPATPADQEHQSLLEHTPGKVAEQMEKL 469

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
               AL  +++++   ++YF A +PW    +NP  +  VLY   E +R   ILLQ F+P 
Sbjct: 470 NPRAALQDIMTIIERTNKYFHAAEPW----SNPAESQRVLYNVAESLRISGILLQPFMPS 525

Query: 469 LANKIFDILFV---ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            +N++ DIL V       R F +      P +        +FP  +
Sbjct: 526 KSNELLDILRVDSADPSKRSFPAATFGRDPDYGEDVKKSVLFPPLI 571


>gi|153952241|ref|YP_001398097.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939687|gb|ABS44428.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 628

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 203/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETKFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + ++ S  F+ + D L+ISYD + RTT   H +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYANKISFEFKKLWDELEISYDIYARTTNTMHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    +             ++EE YFFRLS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQL---INNCSCPDCGKNTTILKEESYFFRLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+    +DP++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEMNDPKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G KAKFWPA +H+ GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGEKAKFWPAHVHLAGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K + G I   G     D   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYFQGNISKEGVLKFYDAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A  ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NIAISKYEPWNLIKENKHEQAHALVALCANILAKTSLLLSPTLPKSCQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 TNYTKIILDNELL--DFKANPCEALFPK 501


>gi|57242363|ref|ZP_00370302.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017043|gb|EAL53825.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 626

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 191/507 (37%), Positives = 301/507 (59%), Gaps = 12/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G   LF TGTDEHGQKI +AA+N   
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLSGHKTLFLTGTDEHGQKIEQAAKNKNY 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K + D+ S  F+ + D  +ISYD + RTT++RH    + ++ K+ +KGDIYKG Y G+
Sbjct: 63  SPKEYADKISLEFKKLWDEFEISYDIYARTTDERHIKFVKQVFLKMWEKGDIYKGEYEGY 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++                + ++EE YFFRLS Y+  +L +YES P  I
Sbjct: 123 YCVSCESFFTQSQLISQ---CGCPDCGKETKLLKEESYFFRLSKYEKNILKWYESEP--I 177

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           +P  ++ E+++F+++GLKDLS++R +F+WGIKIP   +D ++++YVW+DAL  Y+++   
Sbjct: 178 VPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHVIYVWLDALFIYISSL-- 235

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +       F PA +H++GKDILRFHAIY+PAFL+SA+LPLPK + +HG+    G+K+S
Sbjct: 236 ELDEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMSADLPLPKYIAAHGWWTRDGKKMS 295

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN I P  + +  G++  RYFL+RE+  G DG + +  L  R+NA+L+N  GNL+SR
Sbjct: 296 KSKGNAIHPKIIADAYGLEVFRYFLLREVPFGNDGDFSETMLINRINAELSNEFGNLLSR 355

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M LK  +G I          ++ L   +  LQ   E ++N   +R L ++   +S  
Sbjct: 356 IIGMSLKYSNGEILQNEVLN-FYKAELKEANLHLQNALEFIENFQFNRYLEELFKALSVA 414

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N   +A+ ++ +   ++ ++++LL   +PK   K+   L      
Sbjct: 415 NLSISKYEPWNLIKANETSKANALVSLCANILAKVSLLLHPALPKSTQKVAKALSFDITL 474

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +Q L    +         + +FP+ 
Sbjct: 475 QNYQKLILNDELLNFKANACETLFPKI 501


>gi|205356336|ref|ZP_03223101.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345721|gb|EDZ32359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 628

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 199/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV++GLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFH IYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QNKGENAKFWPAHVHLVGKDILRFHTIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK + K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALIALCANILAKTSLLLSPTLPKSSQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 ANYTKMILDNELL--DFKANPCEALFPK 501


>gi|283957174|ref|ZP_06374638.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791350|gb|EFC30155.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 628

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 199/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P E+++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEIVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I         +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKESVLKFYNAE-LNQVKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPALPKSCQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD +L          + +FP+
Sbjct: 476 VNYAKMILDNKLL--DFKANPCEALFPK 501


>gi|262277217|ref|ZP_06055010.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224320|gb|EEY74779.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 500

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 212/508 (41%), Positives = 325/508 (63%), Gaps = 10/508 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K YI+T I YP+A+PH+GHAY  I +DV+ARF R+DG DV F TGTDEHG KI +AA
Sbjct: 2   NKKKFYITTPIYYPSAKPHMGHAYSSIASDVIARFKRIDGCDVSFLTGTDEHGLKIQRAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +        F D+ S+ F D+++ L++S  DFIRTTE+RH +T + LW  + +   +Y  
Sbjct: 62  EEHNSDPLSFCDKISQTFIDLSNTLNLSNTDFIRTTEERHKNTVKKLWSLLQENDQLYLS 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+GWYS+ DEAYY ++EV +    +   +  + V WMEEE +FF+LS +Q  LL +Y++
Sbjct: 122 KYAGWYSVSDEAYYLENEVEEIDGKKISKSSGSEVTWMEEESFFFKLSEWQQPLLDFYKN 181

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI P  R+NEVISF+  GLKDLS+SR TFDWGI +P++ +++MYVW+DALTNYL+ T
Sbjct: 182 NPNFIQPESRKNEVISFISGGLKDLSVSRTTFDWGIDVPNNKKHVMYVWLDALTNYLSAT 241

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            Y DN +     FWPAD+H+IGKDILRFHA+YWPAFL++A LP+PK++F HG+IL   EK
Sbjct: 242 NYFDNHN----GFWPADVHIIGKDILRFHAVYWPAFLMAAKLPVPKQIFGHGWILSGEEK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN++DP+E+I + G D +RY+L++++  G DG  + D L+  +N DLAN IGNL 
Sbjct: 298 MSKSKGNILDPLELINQYGSDEIRYYLMKDVIFGLDGKINIDNLRITLN-DLANNIGNLS 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R  +++ K+Y+  +P        +  +L       + I + +    +H     + S  S
Sbjct: 357 NRIFTILNKNYECKVPQINDGYTINSDLLVD----KKTIIQFIDKYELHNYTKFIHSYSS 412

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +++Y +  +PW  K  +      +L+ T+  ++ + ILL   +P  + K    L + + 
Sbjct: 413 TINKYVNDNEPWNKKNNSEQNIKNILFSTLVALKNIFILLYPVMPLASIKFLKSLNINEN 472

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                +++++L     L K  D +F ++
Sbjct: 473 QIKIDNINEKLTINDQLTKP-DILFKKY 499


>gi|57237679|ref|YP_178927.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|57166483|gb|AAW35262.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058288|gb|ADT72617.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 628

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 199/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV++GLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G   KFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENTKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD +L          + +FP+
Sbjct: 476 TNYAKMILDNKLL--DFKANPCEALFPK 501


>gi|111657212|ref|ZP_01407985.1| hypothetical protein SpneT_02001579 [Streptococcus pneumoniae
           TIGR4]
          Length = 626

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 285/482 (59%), Gaps = 13/482 (2%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            G DV + TG DEHGQKI + A+ AG+T + +VD  +   +++  +LDISYD FIRTT+ 
Sbjct: 1   MGYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDD 60

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQH 154
            H      +++++  + DIY G YSGWYS+ DE ++ +    EV++   G          
Sbjct: 61  YHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSG 120

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKT 213
           + V+W+ EE YF RLS YQD+L+ ++++HPEFI P  R NE++    + GL+DL++SR T
Sbjct: 121 HEVEWVSEESYFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTT 180

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHA 272
           F WG+ +P +P++++YVWIDAL NY T  GY  +  G+  KFW     H++GKDILRFH+
Sbjct: 181 FTWGVPVPSNPKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHS 240

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWP  L+  ++ LP ++ +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R 
Sbjct: 241 IYWPILLMMLDVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRN 300

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESIL 391
           +  G DG +  +    R+N +LAN +GNL++R+VSMI K +DG IP      TE D  + 
Sbjct: 301 LPVGSDGTFTPEDYVGRINYELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLA 360

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
            V  + + +   +M+     RAL  V +L+S  ++Y D   PW L K     D+ ++V+ 
Sbjct: 361 EVAEQSIADFHTHMEAVDYPRALEAVWTLISRTNKYIDETAPWVLAKDEALRDQLASVMS 420

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFP 508
                IR +A L++ F+ + +  +   L + +E    ++L          +     PIFP
Sbjct: 421 HLAASIRVVAHLIEPFMMETSRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFP 479

Query: 509 RF 510
           R 
Sbjct: 480 RL 481


>gi|325182837|emb|CCA17292.1| methionyltRNA synthetase of possible bacterial origi (ISS) putative
           [Albugo laibachii Nc14]
          Length = 741

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 196/509 (38%), Positives = 300/509 (58%), Gaps = 14/509 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y++TAI Y N QPH+GHAYE + ADV+AR+HR+ G +V F TGTDEHGQKIA+ A+ 
Sbjct: 49  EKFYLTTAIHYTNGQPHMGHAYENVTADVIARYHRIFGRNVYFLTGTDEHGQKIAQTAEA 108

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K   D+ +  FR +   L++S   FIRTT ++H    + L+++  +KGDIY G Y
Sbjct: 109 LGIAPKELCDKYAAIFRQLTLDLNMSNSSFIRTTSEKHKVFAQWLFQRALNKGDIYLGTY 168

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++R+E +    EV              P++ M EE YFFR+S YQ +L+ ++ +HP
Sbjct: 169 EGWYNVREEVFVT--EVEAQQSEYKDPVSGIPLKKMREESYFFRMSKYQQRLVDHFHAHP 226

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           EF+ P  RR E++  ++  L+DLS SR TF  GI +P+D  +++YVW DAL NYL+  G+
Sbjct: 227 EFLQPETRRQEIMKRLEEPLQDLSSSRNTFSHGIPLPNDSNHVLYVWFDALANYLSAIGF 286

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKI 303
                     +WPA++H+IGKDI  FH + WP  L+S  +PLPK+VF+HGF+  K G K+
Sbjct: 287 --PDQVEAKTYWPANVHIIGKDITWFHCVIWPCILMSTEIPLPKRVFAHGFVNAKDGMKM 344

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP +++ + G+++ RYFLVR    G+D  + ++ L    N++LA+ +GNLV 
Sbjct: 345 SKSIGNVVDPYDIMNKFGLESFRYFLVRSARYGQDWPFSENDLINIHNSELADTLGNLVH 404

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+V++  K  DG++P   +    D         +L +  +  ++  +  A+  VI  + +
Sbjct: 405 RTVNICKKYSDGVVPNTLS---PDRPF--DFITLLSQSEDAYRDFALQSAVILVIEALRD 459

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V+RY   + PW +  T+      V+   +E I  LA  L  F+PK +  IF+ L    + 
Sbjct: 460 VNRYLTDKAPWHM--TDSASRLIVVRTCLEAIYLLAHFLAPFIPKTSETIFEKLGTPPQK 517

Query: 484 RCFQS-LDQRLKPGFMLHKTFDPIFPRFL 511
               S     L PG  +    D +F + L
Sbjct: 518 LIELSPAFDNLVPGTEVL-VGDILFQKVL 545


>gi|261204906|ref|XP_002627190.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592249|gb|EEQ74830.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239611595|gb|EEQ88582.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327348391|gb|EGE77248.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 580

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 190/500 (38%), Positives = 281/500 (56%), Gaps = 16/500 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 51  DKKPFYVTTPIFYVNAAPHVGHLYTMIVADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN   F+++A   ++ YD FIRTT+  H +  R  W  ++ +G IY 
Sbjct: 111 AAALGMTPQELCDQNCLTFKNLARKGNVEYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V        G            VQW  EE Y FRLSA+++ 
Sbjct: 171 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSVETGKEVQWTSEENYHFRLSAFKEP 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P FI P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 231 LLEHFRKNPGFITPRNYMDGIVSDVSSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY           WPA++HV+GKDILRFH IYWPAFL++ +LPLP+++ +H
Sbjct: 291 ALVNYITYAGYPFPHGSKS--IWPANVHVVGKDILRFHCIYWPAFLMALDLPLPRQILAH 348

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   IE  G+D +R++L  + A   D  Y+   + +R    
Sbjct: 349 GHWTINHEKMSKSTGNVVNPNFAIERFGIDTMRFYLTIDGAQSSDSDYENSYIIERYKKG 408

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L  GIGNL SR +     +    I        + +    +   + + ++  M+     RA
Sbjct: 409 LQWGIGNLTSRLLRGKKWNVRDSIVMATEGQLTRDKHHDLLEMIPERVKAEMEQLDPRRA 468

Query: 414 LAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           L  ++ ++ + ++YF   +PW L K     NP++ + VLY T E +R   ILLQ F+P+ 
Sbjct: 469 LNSIMEIIYQTNKYFHEMQPWSLVKNPSADNPNQLNDVLYTTAESLRIAGILLQPFMPQK 528

Query: 470 ANKIFDILFVAD-ENRCFQS 488
           + ++ D+L VA+ E R F +
Sbjct: 529 SLELLDMLGVAEVEKRNFNA 548


>gi|146323739|ref|XP_752043.2| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129557560|gb|EAL90005.2| methionyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 574

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 189/525 (36%), Positives = 273/525 (52%), Gaps = 22/525 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M+I D+L R+  L G  D    TGTDEHG KI +AA
Sbjct: 52  KKPYYVTTPIFYVNAAPHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+  + F D N + F+ +A   ++ Y+ FIRTT+  H +  +  W+ ++ +G IY  
Sbjct: 112 SAAGMDPQAFCDMNCKTFQALAKAANVDYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTA 171

Query: 123 CYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA+Q++L
Sbjct: 172 KHEGWYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWSSETNYHFRLSAFQERL 231

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L  Y S  +FI P     +V+  V SGL DLS+SR      WGI +P D    +YVW+DA
Sbjct: 232 LELYRS-TDFITPSNYMADVVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDA 290

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V  HG
Sbjct: 291 LINYLTKAGYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHG 350

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS GNV++P   I+  GVD +R+FL  +     D  YD   + +     L
Sbjct: 351 HWTINREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLL 410

Query: 355 ANGIGNLVSRSVSMILKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             GIGNL  R++     +      D       A T  D    S+  +   ++ E M+   
Sbjct: 411 QWGIGNLTHRTIGCAKGNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPDKVAEQMEKLN 470

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL  +++++ + ++YF A +PW+     P  +   LY   E +R   ILLQ F+P  
Sbjct: 471 PRAALQDIMAIIEKTNKYFHAAEPWKT----PAGSQRALYNVAESLRISGILLQPFMPSK 526

Query: 470 ANKIFDILFVADEN---RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + ++ DIL V       R F +      P +        +FP  +
Sbjct: 527 STELLDILRVDKTEPSKRSFSAARYGCDPDYGEGVKKSILFPPLI 571


>gi|33303709|gb|AAP22262.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 416

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 189/416 (45%), Positives = 281/416 (67%), Gaps = 8/416 (1%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   +T + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + +
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 141 -VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            V    +G       +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+N
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRKN 180

Query: 195 EVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           E+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    
Sbjct: 181 EMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKYK 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP
Sbjct: 241 KFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K +
Sbjct: 301 VTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYF 360

Query: 374 DGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            G IP      TE DE++++     L+++ E M+N     AL  +  LVS  ++Y 
Sbjct: 361 SGEIPAFKANVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKYI 416


>gi|159125043|gb|EDP50160.1| methionyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 574

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 188/525 (35%), Positives = 273/525 (52%), Gaps = 22/525 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M+I D+L R+  L G  D    TGTDEHG KI +AA
Sbjct: 52  KKPYYVTTPIFYVNAAPHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+  + F D N + F+ +A   ++ Y+ FIRTT+  H +  +  W+ ++ +G IY  
Sbjct: 112 SAAGMDPQAFCDMNCKTFQALAKAANVDYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTA 171

Query: 123 CYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA+Q++L
Sbjct: 172 KHEGWYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWSSETNYHFRLSAFQERL 231

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L  Y S  +FI P     +V+  + SGL DLS+SR      WGI +P D    +YVW+DA
Sbjct: 232 LELYRS-TDFITPSNYMADVVKSISSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDA 290

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V  HG
Sbjct: 291 LINYLTKAGYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHG 350

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS GNV++P   I+  GVD +R+FL  +     D  YD   + +     L
Sbjct: 351 HWTINREKMSKSTGNVVNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLL 410

Query: 355 ANGIGNLVSRSVSMILKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             GIGNL  R++     +      D       A T  D    S+  +   ++ E M+   
Sbjct: 411 QWGIGNLTHRTIGCAKGNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPDKVAEQMEKLN 470

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL  +++++ + ++YF A +PW+     P  +   LY   E +R   ILLQ F+P  
Sbjct: 471 PRAALQDIMAIIEKTNKYFHAAEPWKT----PAGSQRALYNVAESLRISGILLQPFMPSK 526

Query: 470 ANKIFDILFVADEN---RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           + ++ DIL V       R F +      P +        +FP  +
Sbjct: 527 STELLDILRVDKTEPSKRSFSAARYGCDPDYGEGVKKSILFPPLI 571


>gi|15678615|ref|NP_275730.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122905|sp|O26687|SYM_METTH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2621666|gb|AAB85093.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 651

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 150/535 (28%), Positives = 244/535 (45%), Gaps = 39/535 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++I+ A+ Y N   H+GH     I AD+ AR+ RL G DVLF   TDEHG  IA  A+ 
Sbjct: 3   KVFITCALPYANGPTHLGHLRSTYIPADIYARYRRLRGDDVLFVCATDEHGTPIAVKAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T      +     R   +  DIS+D F RTT++ HH+  +  + K+ +KG IY+   
Sbjct: 63  EGRTPLEVATRYHEMIRGDLERCDISFDSFTRTTDELHHEIAQKFFLKLYEKGFIYEKDI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y    + +  D  V                                      +  + 
Sbjct: 123 KQLYCGDCQRFLPDRYVEGTCPYCGSEGARGDHCEGCGRHLEPLQLEDPRCMVCGSEPEV 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI- 218
            +   YFFRL+ +QD++  + E       P   RN  I +++ GLKD  L+R   +WG+ 
Sbjct: 183 RDSRHYFFRLNQFQDEIREWIEGSEM---PSNVRNYAIQWLREGLKDWILTRD-MEWGVQ 238

Query: 219 -KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYW 275
             +  +   I+YVW +A   Y+++        G   + +     +H IGKDI+  HAI+W
Sbjct: 239 VPLEGNEGKIIYVWGEAFLGYISSAAAWSKKTGRDWREYWDSGAIHFIGKDIIYHHAIFW 298

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++     P  + +  ++  +G+K+S S   V+   + +E    D LRY+L      
Sbjct: 299 PALLMAYGCRTPANIIAGEYLSLEGQKMSTSKNWVVWTSDFLERFDRDLLRYYLTVNAPL 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +  D  ++RVN +LA+ +GN + R+ S   + +DG +P  G  T  D   L    
Sbjct: 359 TRDTDFSWDDFQRRVNDELADVLGNFLHRTFSFTGRFFDGRVPAAGELTAEDLEFLESIR 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
                + E +       AL  +I L    ++YF+ Q+PW+  K +P RAST L++   + 
Sbjct: 419 AAHDTVAELLDKFQFRDALMHIIKLAKRGNKYFNDQEPWKAVKESPARASTCLHLCNLLA 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             L  LL+ F+P  A +I  I+ + DE   F  L +       + +   P+F + 
Sbjct: 479 ANLGKLLRPFMPSAAGRILSIMNLEDEAWGFHELREG-----QVIERAKPLFSKI 528


>gi|86150271|ref|ZP_01068498.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597490|ref|ZP_01100724.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562466|ref|YP_002344245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|25009405|sp|Q9PP85|SYM_CAMJE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|85839387|gb|EAQ56649.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190082|gb|EAQ94057.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360172|emb|CAL34966.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926083|gb|ADC28435.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 628

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 200/508 (39%), Positives = 303/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV++GLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK + K+   L     +
Sbjct: 416 NLAISKYEPWSLIKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 ANYTKMILDNELL--DFKANPCEALFPK 501


>gi|86152046|ref|ZP_01070258.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124355|ref|YP_004066359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85840831|gb|EAQ58081.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018077|gb|ADT66170.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 628

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 201/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKFYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 TNYAKMILDNELL--DFKANPCEALFPK 501


>gi|307747746|gb|ADN91016.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 628

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 201/508 (39%), Positives = 301/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++               +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKNTTIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H+IGKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLIGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCEKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 TNYAKMILDNELL--DFKANPCEALFPK 501


>gi|331703032|ref|YP_004399719.1| methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801587|emb|CBW53740.1| Methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 509

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 177/514 (34%), Positives = 290/514 (56%), Gaps = 17/514 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I YD FIRTT+  H    + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHEKAVQRIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++    +G    +   P Q + E+ YF ++S +Q+ + +      
Sbjct: 123 EGIYCVSCEEFLTNEQI--DENGLCKISNTKP-QLVNEDTYFLKVSQFQEFVQNVL--KS 177

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++    + GLKDLS++R +F WGI I +D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITEDQRHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDECEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    D LR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADPLRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I       + D+ ++++  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--KYDQELINLGIKTIDNYVFNMDQYKISEAIKVVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L +  ++Y + + PW L+K N  +   TVL      I  ++ LL+  +      + +   
Sbjct: 416 LSNACNKYIETKAPWNLEKENKIEELKTVLATLQRNIAIISYLLKPILVDSYKDMIEQSG 475

Query: 479 VADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           + +    F++L     +K   + +K    IF R 
Sbjct: 476 LENVQIDFENLKSFSNIKFNKLNNKKV--IFNRI 507


>gi|304314728|ref|YP_003849875.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588187|gb|ADL58562.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 652

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 150/535 (28%), Positives = 251/535 (46%), Gaps = 39/535 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++I+ A+ Y N   H+GH     I AD+ AR+ RL G DVLF   TDEHG  IA  A++
Sbjct: 3   KVFITCALPYANGPTHLGHLRSTYIPADIYARYRRLRGDDVLFVCATDEHGTPIAVKAES 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+       + +   +   +  DIS+D F RTT+  H++  +  + K+ +KG IY+   
Sbjct: 63  EGLKPIEVATRYNEMIKRDLEECDISFDSFTRTTDDLHYEIAQNFFLKLYEKGYIYEKDI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y    + +  D  V                                      +    
Sbjct: 123 KQLYCNSCQRFLPDRYVEGICPHCGGEGARGDHCESCGRHLEPLQLEDPVCMVCGSEPVV 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   YFFRLS +QDKL+ +         P   +N  + +++ GL+D  L+R   DWG+ 
Sbjct: 183 RDSRHYFFRLSQFQDKLMEWIGESDM---PSNVKNYALQWLREGLRDWILTRD-MDWGVP 238

Query: 220 IP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYW 275
           +P   +   I+YVW +A   Y+++        G   + +     +H IGKDI+  HAI+W
Sbjct: 239 VPLEGNDGKIIYVWGEAFLGYISSAAAWSRKTGKPWREYWDAGAVHFIGKDIIYHHAIFW 298

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++    +P+ + +  ++  +G K+S S   V+   + +E    D LRY+L      
Sbjct: 299 PALLMAYGCRIPENIIAGEYLSLEGRKMSTSKNWVVWTSDFLERFHKDLLRYYLTVNAPL 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +  D  ++RVN +LA+ +GN + R+ S   + +DG +P P   T  DE  L+   
Sbjct: 359 TRDTDFSWDDFQRRVNDELADVLGNFLHRTFSFTGRFFDGRVPEPSELTAEDEEFLNSIR 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R    + E ++N     A+  VI L  + ++YF+ Q+PW   K +P+RAST L++   + 
Sbjct: 419 RAPDTVGELLENFQFRDAMMSVIKLAKKGNKYFNDQEPWRAIKESPERASTCLHLCNLLA 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             L  LL  F+P  A ++  I+ + DE   F  L+        + +   P+F + 
Sbjct: 479 ANLGKLLMPFMPSSAGRVLSIMNMEDEPWGFHELE-----AGRVIERARPLFSKI 528


>gi|157415105|ref|YP_001482361.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386069|gb|ABV52384.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 628

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 200/508 (39%), Positives = 301/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++               +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKNTTIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCEKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 TNYAKMILDNELL--DFKANPCEALFPK 501


>gi|86153308|ref|ZP_01071512.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843034|gb|EAQ60245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 628

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 201/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNILKEGVLKFYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 TNYAKMILDNELL--DFKANPCEALFPK 501


>gi|318041393|ref|ZP_07973349.1| methionyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 522

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 185/520 (35%), Positives = 271/520 (52%), Gaps = 20/520 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G AY  +  D LARF RL G  V+F TG DEHGQKI + A+ A
Sbjct: 2   TYTLTTPLYYVNDKPHLGSAYTTLACDALARFQRLKGERVVFITGCDEHGQKIQRTAEAA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +   D  S  +R++ D   IS++  IRTT+ RH       + ++   GDI +G   
Sbjct: 62  GLSPQAHCDGVSAQYRELWDRWQISHNRLIRTTDPRHQRIVEQFFARVEANGDIVEGRQQ 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + +D    +  +         P++W +E   FFRLS YQ+  +    + P 
Sbjct: 122 GWYCVACEEFKDDPHEAQDPE---CPTHRRPLEWRDELNLFFRLSRYQE-QIEALIAQPG 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RRNEV +FVK GL+D S+SR    WGI +P    +  YVW DAL  Y+T     
Sbjct: 178 FIQPASRRNEVENFVKQGLRDFSISRVNLPWGIPVPGHEGHTFYVWFDALLGYITALLEE 237

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +        ++ WPA +HVIGKDILRFHA+YWPA LLSA L LP KVF HGF+  +G+K
Sbjct: 238 GDAPDLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSAGLELPAKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP E++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPAELLERCGRDAVRWYLLRDIPFGDDGDFQQQRFSDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  + ++  +P       SD  +    +     +   ++      A    + L  
Sbjct: 358 NRTSSMARRWFEECVPPATGAANSDHPLAQAAATARTTVLTALEQLDFRSAAEAALQLAI 417

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDILFV- 479
             + + + Q PW   K    R       Y  +E  R  A+L+   +P L+ ++   L   
Sbjct: 418 AANGFLNEQAPWSRMKQEGTREQVADDLYAVLEAARITALLMAPLLPDLSERMLVQLGQS 477

Query: 480 --------ADENRCFQSLDQ-RLKPGFMLHKTFDPIFPRF 510
                   A E+   Q L+   L+ G  L +   P+  R 
Sbjct: 478 VPDSSASAAGESGWLQQLEWGGLQSGAALPEP-SPVMARL 516


>gi|33303699|gb|AAP22257.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 416

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 190/416 (45%), Positives = 283/416 (68%), Gaps = 8/416 (1%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + +
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 141 -VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            V    +G       +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+N
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKN 180

Query: 195 EVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           E+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    
Sbjct: 181 EMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYK 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP
Sbjct: 241 KFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K +
Sbjct: 301 VTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYF 360

Query: 374 DGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           +G IP      TE DE++++     L+++ E M+N     AL+ +  LVS  ++Y 
Sbjct: 361 NGEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYI 416


>gi|256384330|gb|ACU78900.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256385163|gb|ACU79732.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455562|gb|ADH21797.1| methionine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 509

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 177/514 (34%), Positives = 291/514 (56%), Gaps = 17/514 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I+YD FIRTT+  H    + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNINYDKFIRTTDDYHEKAVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++    +G    +   P Q + E+ YF ++S +Q+ + +      
Sbjct: 123 EGIYCVSCEEFLTNEQI--DENGLCKISNTKP-QLVNEDTYFLKVSQFQEFVQNVL--KS 177

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++    + GLKDLS++R +F WGI I +D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITEDQRHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I         D+ ++++  + +     NM    I  ++  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYINLSNV--NYDQELINLGIKTIDNYVFNMDQYKISESIKAVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L +  ++Y + + PW L+K N  +   TVL      I  ++ LL+  +      + +   
Sbjct: 416 LSNACNKYIETKAPWNLEKENKIEELKTVLATLQRNIAIISYLLKPVLVDSYKDMIEQSG 475

Query: 479 VADENRCFQSLD--QRLKPGFMLHKTFDPIFPRF 510
           + +    F++L     +K   + +K    IF R 
Sbjct: 476 LENVQIDFENLKSFSNIKFNKLNNKKV--IFNRI 507


>gi|313664963|ref|YP_004046834.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949209|gb|ADR23805.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 509

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 178/512 (34%), Positives = 287/512 (56%), Gaps = 13/512 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I+YD FIRTT+  H +  + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQTFKDLWAKLNINYDKFIRTTDDYHEEAVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++    +G    +   P Q + E+ YF ++S +Q+ + +      
Sbjct: 123 EGIYCVSCEEFLTNEQI--DENGLCKISSTKP-QLVNEDTYFLKVSQFQEFVQNIL--KS 177

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           +F++P  RRNE++    + GLKDLS++R +F WGI I  D ++I+YVW+DAL+NY+T  G
Sbjct: 178 DFLIPEYRRNEMLKNFVEPGLKDLSVTRVSFKWGIPITQDEKHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVILEALNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNVIDPVKIIELYSADALRFYISNDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I       + D+ ++ +  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNV--KYDQELIDLGIKTIDNYIFNMDQYKISEAIKVVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L +  ++Y + + PW L+K N  +   TVL      I  ++ LL+  +      + +   
Sbjct: 416 LSNACNKYIEVKTPWNLEKENRIEELKTVLITLQRNIAIISYLLKPILVDSYKDMIEQSG 475

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + +  F  L   L   F        IF R 
Sbjct: 476 LENVDINFDILKTFLNIKFNKLGNKKVIFNRI 507


>gi|325092268|gb|EGC45578.1| methionine-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 586

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 187/497 (37%), Positives = 272/497 (54%), Gaps = 19/497 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 52  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 111

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN + F+++A   ++ YD FIRTT+  H +  R  W  ++ +G IY 
Sbjct: 112 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 171

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V        G            VQW  EE Y FRLSA+Q+ 
Sbjct: 172 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSAFQEP 231

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P+F+ P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 232 LLEHFRKNPDFVTPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 291

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P       WPAD+ V+GKDILRFH IYWPAFL++  LPLP+++ +H
Sbjct: 292 ALVNYITYAGYPFPPGA--QSIWPADVQVVGKDILRFHCIYWPAFLMAVGLPLPRRILAH 349

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   +E  GVDA+R++L  + A   D  Y+   + +R    
Sbjct: 350 GHWTINHEKMSKSTGNVVNPHFAMERFGVDAMRFYLTIDGAQTSDSDYENSYIVERYKKG 409

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L  GIGNL SR +          +        + +    +   +   ++  M+     RA
Sbjct: 410 LQWGIGNLASRLLRGKKWSVRDSVVLAAQGRLARDKHHELLEAMPGRVKAEMEQLDPRRA 469

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT--------NPDRASTVLYVTVEVIRQLAILLQAF 465
           L  ++ ++ + ++YF   +PW L  +             S+ LY T E +R   ILLQ F
Sbjct: 470 LNSIMEIIHQTNKYFHDMQPWSLVNSQTQPQTQPQNPTLSSALYTTAESLRITGILLQPF 529

Query: 466 VPKLANKIFDILFVADE 482
           +P  A ++ D+L VA E
Sbjct: 530 MPHKAAELLDMLGVARE 546


>gi|148985860|ref|ZP_01818954.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147922006|gb|EDK73130.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
          Length = 626

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 285/482 (59%), Gaps = 13/482 (2%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            G DV + TG DEHGQKI + A+ AG+T + +VD  +   +++  +LDISYD FIRTT+ 
Sbjct: 1   MGYDVFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAVGVKELWQLLDISYDKFIRTTDD 60

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQY---YNAQH 154
            H      +++++  + DIY G YSGWYS+ DE ++ +    EV++   G          
Sbjct: 61  YHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEFFTESQLAEVFRDEAGNVTGGIAPSG 120

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKT 213
           + V+W+ EE YF RLS YQD+L+ ++++HPEFI P  R NE++    + GL+DL++SR T
Sbjct: 121 HEVEWVSEESYFLRLSKYQDRLVEFFKAHPEFITPDGRLNEMLRNFIEPGLEDLAVSRTT 180

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHA 272
           F WG+ +P +P++++YVWIDAL NY T  GY  +  G+  KFW     H++GKDILRFH+
Sbjct: 181 FTWGVPVPSNPKHVVYVWIDALLNYATALGYAQDEHGNFDKFWNGTVFHMVGKDILRFHS 240

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWP  L+  ++ LP ++ +HG+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R 
Sbjct: 241 IYWPILLMMLDVKLPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRN 300

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESIL 391
           +  G DG +  +    R+N +LAN +GNL++R+VSMI K +DG IP      TE D  + 
Sbjct: 301 LPVGSDGTFTPEDYVGRINYELANDLGNLLNRTVSMINKYFDGQIPAYVEGVTEFDHVLA 360

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
            V  + + +   +M+     RAL  V +L+S  ++Y D   PW L K     D+ ++V+ 
Sbjct: 361 EVAEKSIADFHTHMEAVDYPRALEAVWTLISRTNKYIDETAPWVLDKDEALRDQLASVMS 420

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFP 508
                IR +A L++ F+ + +  +   L + +E    ++L          +     PIFP
Sbjct: 421 HLAASIRVVAHLIEPFMMETSRAVLTQLGL-EEVSSLENLSLADFPADVTVVAKGTPIFP 479

Query: 509 RF 510
           R 
Sbjct: 480 RL 481


>gi|295672620|ref|XP_002796856.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282228|gb|EEH37794.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 576

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 191/487 (39%), Positives = 277/487 (56%), Gaps = 11/487 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PHIGH Y MI+ DVL R+  L G  D    TGTDEHG KI +A
Sbjct: 50  DKKPFYVTTPIFYVNAAPHIGHLYTMILGDVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 109

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AG+  +   DQN + F+++A  +++  D FIRTT+ +H D  R  W  ++ +G IY 
Sbjct: 110 AAVAGMAPQELCDQNCQTFKNLARTVNVENDHFIRTTDPQHKDAVRHFWDMLNHRGYIYT 169

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V    D                VQW  EE Y FRLSA+++ 
Sbjct: 170 AKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQWTSEENYHFRLSAFKEP 229

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL YY++HP FI P    +++++ V SGL+DLS+SR     +WGI +P D   ++YVW+D
Sbjct: 230 LLEYYKNHPNFITPKRYMDDMVNAVSSGLQDLSISRPASRLNWGIPVPSDESQVIYVWLD 289

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P       WPAD+ V+GKDILRFH IYWPAFL++  LPLP+++ +H
Sbjct: 290 ALINYITYAGYPFPP--DAKSIWPADVQVVGKDILRFHCIYWPAFLMALGLPLPRQIMAH 347

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS GNV++P   IE  GVD +R+FLV + A   D  YD   + +R    
Sbjct: 348 AHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQVSDSGYDNSYIVERYKKG 407

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L  G+GNL SR +          +   G               + ++ R+ M+     RA
Sbjct: 408 LQWGLGNLASRVLRGKKWSVRSSVVMAGEGRFQRTEHQDFLESIPEKARDEMRQLDPRRA 467

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L  ++ ++ + ++YF   KPW L  +N  + ++V+Y T E +R   ILLQ F+P+ ++K+
Sbjct: 468 LNSIMEIIIQTNKYFHQMKPWTLVMSNLVQLNSVIYSTAESLRIAGILLQPFMPQKSSKL 527

Query: 474 FDILFVA 480
            D+L V 
Sbjct: 528 LDMLGVE 534


>gi|312136830|ref|YP_004004167.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224549|gb|ADP77405.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 550

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 136/535 (25%), Positives = 256/535 (47%), Gaps = 35/535 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++++ A+ Y N   H+GH     I AD+ +R+ R+ G DVLF   TDEHG  IA  A+ 
Sbjct: 2   KIFVTCALPYANGPLHLGHLRSTYIPADIYSRYQRMVGNDVLFVCATDEHGTPIAVKAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G        +  +  +   D  DIS+D+F RT+   H+   +  + K+  KG IY+   
Sbjct: 62  EGKDPLEITTKYYKKIKSDLDKCDISFDNFSRTSSDIHYKVAQNFFLKLYKKGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
             +Y    + +  D  V                                         + 
Sbjct: 122 KQFYCTNCKRFLPDRYVEGICPYCDSEGARGDHCEVCGRHLEVLELIKPRCILCSGEPEI 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + + YFF+LS +Q KL  + E++ E  LP   +N  + ++K GL D  ++R    WG+ 
Sbjct: 182 RKSKHYFFKLSKFQKKLKEWVENNEE--LPSNVKNYTLEWLKEGLNDWIMTRD-MKWGVP 238

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYW 275
           +P +     ++YVW +A   Y+++       +    K +     +H IGKDI+  H I+W
Sbjct: 239 VPLEDAEGKVIYVWGEAFLGYISSAIEWSKKNKKDWKEYWDSGAIHFIGKDIIYHHTIFW 298

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++    LP+ V +  ++  +G+K+S S   V+   + ++    D LRY+L      
Sbjct: 299 PAMLMAYGCKLPRTVIAGEYLSLEGKKMSTSKNWVVWVSDFLKRFDSDLLRYYLTINAPL 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +  D  ++RVN +LA+ +GN + R++    + +D  IP P  F E D        
Sbjct: 359 TRDTDFSWDDFQRRVNDELADILGNFIHRALMFTYRFFDAKIPEPSEFGEKDIEFEERIK 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
              + +   ++N      L +++ L  + ++YF+ Q+PW+  K N  +A+T +Y+  + +
Sbjct: 419 ESPKIVGNFIENFKFRDGLIEIMKLARDGNKYFNDQEPWKTFKENKYKAATCIYLCDQAV 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + +L++ ++PK ++ I  +L + D+N  ++  ++ ++P   ++K   P+F + 
Sbjct: 479 KAIGVLIKPYLPKTSSNILSMLNL-DDNVRWEDANEFIEPNHKINKP-KPLFSKI 531


>gi|206895720|ref|YP_002247393.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738337|gb|ACI17415.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 638

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 199/514 (38%), Positives = 285/514 (55%), Gaps = 28/514 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PH G AY  + AD LAR+HRL G    F TGTDEHGQ I K A   G
Sbjct: 4   YYVTTPIYYVNAEPHAGSAYTTVYADALARYHRLIGDRTFFLTGTDEHGQNILKVANEKG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  + FVDQ ++ F+D    + IS DDFIRTTE RH    + + + + +KGDIY G Y G
Sbjct: 64  INPQEFVDQMAQKFKDAWRFMRISNDDFIRTTEPRHEKVVQRVIEIMYEKGDIYLGTYQG 123

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY  + E YY ++E+  G           PV+++ EE YFF+ S YQD LL  Y ++P+F
Sbjct: 124 WYCPKCETYYGENELENGN----CPIHKTPVEFVSEESYFFKWSKYQDPLLELYRTNPDF 179

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           ++P  R NE+ SFV+ GLKD+S+SR +  WGI +P D ++ +YVW DAL NY++  GY  
Sbjct: 180 VVPATRLNEIKSFVERGLKDISVSRTSVPWGIPVPFDTKHTVYVWYDALINYISALGY-- 237

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
              G K +FWP  +H+IGKDILR HA  WPA L+S  LP+PK+V +HG+ L  G+K+SKS
Sbjct: 238 TDSGEKMEFWP-GVHLIGKDILRHHAALWPAMLMSLELPVPKRVVAHGWWLVSGQKMSKS 296

Query: 307 LGNVIDPIE----------VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           +GN+  P +          + E++ VDALRYF++       D     + L    NADLAN
Sbjct: 297 VGNIFSPQDLVSHIENSVGLTEDIAVDALRYFMLAAGPQRDDADLSLEALWGTYNADLAN 356

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             GNL+ R +  + K   G+   P    +    + +V    LQ+     + + +  AL+ 
Sbjct: 357 DYGNLLHRVLGFMKKK--GIDTAPKVTGQRYSRVAAVVEEQLQKYHAAYEKEDVQGALSS 414

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + L+  ++ + D +KPW L   +    +  LY  +E  R    +L   +P  A ++   
Sbjct: 415 ALDLIKFLNDFQDKEKPWTLSGDD---LAEFLYSELEAYRVATTMLSPAMPSAAQRVAAT 471

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L      +   SL      GF    T  P+FPRF
Sbjct: 472 L------QTQLSLTFGKVSGFKPDLTQPPLFPRF 499


>gi|121612346|ref|YP_001000523.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005457|ref|ZP_02271215.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249443|gb|EAQ72403.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 628

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 200/508 (39%), Positives = 302/508 (59%), Gaps = 15/508 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +YE     I
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWYEEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+I+FV+SGLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYISSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLP+ + +HG+   +GEK+S
Sbjct: 239 --QSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPEFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSTKYSQGNISKEGVLKFYNVE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPTLPKSCQKVALALNFEISS 475

Query: 484 RCFQS--LDQRLKPGFMLHKTFDPIFPR 509
             +    LD  L          + +FP+
Sbjct: 476 TNYAKIILDNELL--DFKANPCEALFPK 501


>gi|320037850|gb|EFW19787.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 584

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 192/535 (35%), Positives = 285/535 (53%), Gaps = 26/535 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +R+  Y++T I Y NA PH+GH Y +++AD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 47  QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G+      DQN + F+D+A   ++ +D FIRTT+  H D  +  W+ +  +G IY 
Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166

Query: 122 GCYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y  + V+       G            V+W  E  Y FRLSA++D+
Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDR 226

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P FI P    + ++  V SGL DLS+SR      WGI++P D    +YVW+D
Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPA++HV+GKDILRFH +YWPAFL++ +LPLP++V SH
Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALDLPLPRQVLSH 346

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS GNV++P+  +   GVD LR++L  +     D  Y+   + +R    
Sbjct: 347 AHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKT 406

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQ 408
           L  G+GNL SR V     +    I           +E+D     +   +    R  M + 
Sbjct: 407 LQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPPSEADRKHQQLLEGIRDVTRSWMDDL 466

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQA 464
              +A   V+ ++ E ++YF   +PW + +    T P   S V+Y T E +R   ILLQ 
Sbjct: 467 NPRKAAESVVGIIHETNKYFQEARPWSMAEQSGNTEPTELSRVIYNTAESLRIAGILLQP 526

Query: 465 FVPKLANKIFDILFVA--DENRCFQSL-----DQRLKPGFMLHKTFDP-IFPRFL 511
           F+P+ + ++ D+L VA   E R F++      +    P   L K  +  +FP  +
Sbjct: 527 FMPEKSARLLDMLGVAGDPEKRSFEAAIFGADEHYGVPLVELKKGTEATLFPPLV 581


>gi|317178659|dbj|BAJ56447.1| methionyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 650

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 299/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    ++    D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMVHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSTKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|296807197|ref|XP_002844184.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843667|gb|EEQ33329.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 588

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 186/542 (34%), Positives = 279/542 (51%), Gaps = 34/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
            + +  Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +
Sbjct: 46  TKSKPYYVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQ 105

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+  +   D+N + F+ +A   ++S+D FIRTT+  H    +  W+ ++ +G IY
Sbjct: 106 AALQNGLEPQALCDRNCKTFKTLAKEANVSHDHFIRTTDSAHKSAVQFFWENLNHRGYIY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           +G + GWYS+ DE +Y    V+       G            V++ +E  Y F+LSA+QD
Sbjct: 166 EGKHEGWYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFTQETNYHFKLSAFQD 225

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWI 232
           +LL +Y  +P FI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+
Sbjct: 226 RLLEHYRKNPTFIQPQVYMDSIVQNVSSGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWL 285

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +
Sbjct: 286 DALVNYITYAGYPFTPGREEESIWPADVHVVGKDITRFHCIYWPAFLMALDLPLPRTILT 345

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H        K+SKS GNV++P+  +   GVD +R++L        D  YD   + +    
Sbjct: 346 HAHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAINGGLASDTDYDNSYIVRDYKN 405

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE---------SILSVCSRVLQEIRE 403
            L  G+GNL SR +    K ++       A +  D            +   S+V   + +
Sbjct: 406 ILQGGLGNLCSRIMR--GKGWNVRESVITATSGPDRGKAKNKSEYEHMEFLSKVPSLVSK 463

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP------DRASTVLYVTVEVIRQ 457
            M      RAL +++ ++ + +RY     PW L K         D+   V+Y   E +R 
Sbjct: 464 QMNELNPRRALEEIVKIIDQTNRYVQNTGPWNLAKEAATNPAAHDQLVGVIYNAAESLRI 523

Query: 458 LAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKP--GFMLHKTFDP----IFPR 509
             ILLQ F+P+ A ++ D+L V D+   R F +    + P  G             +FP 
Sbjct: 524 TGILLQPFMPEKAKRLLDMLGVEDDLSKRSFAASSYGVDPDYGTPSVPLGKGQAGTLFPP 583

Query: 510 FL 511
            L
Sbjct: 584 LL 585


>gi|114582400|ref|XP_516010.2| PREDICTED: methionine-tRNA synthetase 2 [Pan troglodytes]
          Length = 593

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 189/546 (34%), Positives = 276/546 (50%), Gaps = 50/546 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RTYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS ++  L 
Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H  
Sbjct: 284 VNYLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +   +             PG           D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFD 504
             LLQ   P LA+K+   L V+   R    L               +RL P   L     
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLGPETGL----- 575

Query: 505 PIFPRF 510
            +FPR 
Sbjct: 576 -LFPRL 580


>gi|225166021|ref|ZP_03727769.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799733|gb|EEG18214.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 520

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 187/523 (35%), Positives = 281/523 (53%), Gaps = 28/523 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  YI+TAI Y N  PH+GHAYE ++ DV+ARF R  G DV F TG DEHGQK+ + A
Sbjct: 2   KKKTFYITTAIDYVNGSPHLGHAYEKVLTDVIARFRRAMGDDVYFLTGVDEHGQKVQQTA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  + F D+ S+ FR +   L+IS DDFIRTTE RH +  R L +K+ DKG+IYK 
Sbjct: 62  QKRGIPPQQFCDEISQEFRAVCATLNISNDDFIRTTEPRHKNVVRDLLQKLYDKGEIYKA 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+G+YS R E +  D +         +      V  + E  YFF+L AYQD L+ +  +
Sbjct: 122 EYTGFYSTRQEQFLQDKD---RNPDGTWPEIFGEVTEITESNYFFKLRAYQDWLIDFLNT 178

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +  F+ P  R+ +V+ F+   L DL +SR     +WGI +P D  ++ YVW DAL NY  
Sbjct: 179 NENFVFPRYRQKQVLEFLSEPLNDLCISRPKERLEWGIPLPFDENFVTYVWFDALVNY-- 236

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
                 +    K   WPAD HVIGKDI +  HA+YWP  L +  +  P+ + +HG+    
Sbjct: 237 -----YSAVIDKPGVWPADFHVIGKDILVPPHAVYWPIMLKALGIEPPRALLAHGWWSIN 291

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN ++P+    + GVDALRYFL+RE++ G+D  +       R NA+LAN +G
Sbjct: 292 GSKMSKSTGNFVEPVSFAAQYGVDALRYFLIREMSVGQDSDFSLQQFLARYNAELANNLG 351

Query: 360 NLVSRSVSMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           NLV+R+++M  +             P    + +  + ++  +   E+ E  +    H AL
Sbjct: 352 NLVNRTLNMTNRFAGGCVPPLPPSPPSEGGDLERELRALWEKTRDEVIELSEGFQFHIAL 411

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV----EVIRQLAILLQAFVPKLA 470
            +    ++  +RY + + PW+L K+       +L V++    E +R  A LL A +P+  
Sbjct: 412 ERTFGFITATNRYVEQRAPWKLGKSAEAADQALLRVSLATMAEALRLGATLLVAVMPETV 471

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFML----HKTFDPIFPR 509
            K++ +L          +   RL  G  L          +FPR
Sbjct: 472 EKVYGVLGYTPAAGS--AWRDRLVWGDTLAGAKVAETAILFPR 512


>gi|14318634|gb|AAH09115.1| MARS2 protein [Homo sapiens]
          Length = 594

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 189/546 (34%), Positives = 275/546 (50%), Gaps = 50/546 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 45  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 105 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 164

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS ++  L 
Sbjct: 165 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 224

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 225 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 284

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H  
Sbjct: 285 VNYLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 341

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 342 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 401

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +   +             PG           D +++S  + + +++
Sbjct: 402 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 461

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 462 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 521

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFD 504
             LLQ   P LA+K+   L V+   R    L               +RL P   L     
Sbjct: 522 GTLLQPVTPSLADKLLSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLGPETGL----- 576

Query: 505 PIFPRF 510
            +FPR 
Sbjct: 577 -LFPRL 581


>gi|317177788|dbj|BAJ55577.1| methionyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 647

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 196/510 (38%), Positives = 299/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNNLDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E GV+ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGVEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSTKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSATKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|24308436|ref|NP_612404.1| methionyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|85541638|sp|Q96GW9|SYMM_HUMAN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|21758066|dbj|BAC05238.1| unnamed protein product [Homo sapiens]
 gi|62702320|gb|AAX93244.1| unknown [Homo sapiens]
 gi|116497019|gb|AAI26295.1| Methionyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119590576|gb|EAW70170.1| methionine-tRNA synthetase 2 (mitochondrial) [Homo sapiens]
 gi|313883188|gb|ADR83080.1| methionyl-tRNA synthetase 2, mitochondrial [synthetic construct]
          Length = 593

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 189/546 (34%), Positives = 275/546 (50%), Gaps = 50/546 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS ++  L 
Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H  
Sbjct: 284 VNYLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +   +             PG           D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFD 504
             LLQ   P LA+K+   L V+   R    L               +RL P   L     
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLGPETGL----- 575

Query: 505 PIFPRF 510
            +FPR 
Sbjct: 576 -LFPRL 580


>gi|328477979|gb|EGF47895.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 585

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 171/446 (38%), Positives = 272/446 (60%), Gaps = 11/446 (2%)

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
            +   + +  +L+I+ D FIRTT+K H +  + + +++  +GD+Y G Y+GWYS+ DE Y
Sbjct: 1   MAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVYLGEYTGWYSVEDEEY 60

Query: 136 YNDD---EVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           + +    EVY+  DG+    +    + VQ + E  YFF++S Y D+LL YY+ HP+F+ P
Sbjct: 61  FTESQLSEVYRDKDGKVIGGKAPSGHEVQLVHEPSYFFKMSKYTDRLLKYYDEHPDFVQP 120

Query: 190 IERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
             R+ E+I+   K GL+DL++SR +F+WG++IP DP++++YVW+DAL NY+T  GY  N 
Sbjct: 121 ASRKTEMINNFIKPGLEDLAMSRTSFNWGVQIPSDPKHVVYVWVDALLNYITALGYGSND 180

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
                K+WPA++ +IGK+I+RFH IYWP  L++ +LPLPKK+++HG+++ K  K+SKS G
Sbjct: 181 HALFDKYWPANVQLIGKEIVRFHIIYWPIILMALDLPLPKKIYAHGWLVMKDGKMSKSKG 240

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N I P  ++E  G+DALRY+L+R I  G DG +  +    R+N DLAN +GNL++R+++M
Sbjct: 241 NAIYPDMIVERYGLDALRYYLMRAIPFGNDGIFTPEDFIDRINYDLANDLGNLLNRTIAM 300

Query: 369 ILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           I K  DG++P      T  D+ +  V    L +  + M       AL QV  +VS  ++Y
Sbjct: 301 INKYEDGILPAFKPDVTPFDQDLGDVAQAALAQYHKLMDELRFSDALDQVWKIVSRANKY 360

Query: 428 FDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            D  +PW+L K     D+  +V+    E +R +A+L+Q  +     +IF  L +  EN  
Sbjct: 361 IDETEPWKLAKDPAKKDQLDSVMAHLAESLRLIALLIQPVMTHAPVQIFGQLGLDHENED 420

Query: 486 FQSLDQR-LKPGFMLHKTFDPIFPRF 510
            + +    L  G  + +   PIFPR 
Sbjct: 421 HKVVKWGALPAGAKVVEQGTPIFPRL 446


>gi|317182290|dbj|BAJ60074.1| methionyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 653

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 299/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNNLDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++++   ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKFIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|208434910|ref|YP_002266576.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432839|gb|ACI27710.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 650

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 196/507 (38%), Positives = 299/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETALLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKVTAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLF 506


>gi|42560572|ref|NP_975023.1| methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|42492068|emb|CAE76665.1| Methionine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320800|gb|ADK69443.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 509

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 179/514 (34%), Positives = 286/514 (55%), Gaps = 17/514 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I YP+   H+GHAY   +AD+L R+ +  G +  F TG+DEHGQKI   A+ 
Sbjct: 3   KKFYITTPIYYPSGNLHLGHAYTTTLADILNRYKKEQGYETFFLTGSDEHGQKIENKAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +T   +++   + F+D+   L+I YD FIRTT+  H  T + ++  + +KG IYKG Y
Sbjct: 63  ANLTPLEYLNPKVQAFKDLWTKLNIDYDKFIRTTDDYHEKTVQKIFTILLEKGYIYKGQY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +  ++++    +G    +   P Q + E  YF ++S +Q+ + +      
Sbjct: 123 EGIYCVSCEEFLTNEQI--DENGLCKISNTKP-QLVNENTYFLKVSQFQEFVQNIL--KS 177

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EF++P  RRNE++    + GLKDLS++R  F WGI I  D ++I+YVW+DAL+NY+T  G
Sbjct: 178 EFLIPEYRRNEMLKNFVEPGLKDLSITRVNFKWGIPITQDQKHIIYVWLDALSNYITALG 237

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL   D    KFW  D    L + GK+I+RFH+IYWP  L + NL  P  +  HG+IL+K
Sbjct: 238 YLQEDDSLFKKFWQNDDCEILQLAGKEIIRFHSIYWPVMLETLNLKQPTHLLGHGWILNK 297

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGN+IDP+++IE    DALR+++  ++   KDG +  +   +  NA LAN +G
Sbjct: 298 NTKMSKSLGNIIDPVKIIELYSADALRFYIANDLPTEKDGNFSLELFIESFNAHLANNVG 357

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR+ +MI K ++G I       + D+ ++ +  + +     NM    I  A+  V+ 
Sbjct: 358 NLISRTHNMISKYFNGYIDLNNI--KYDQELIDLGIKTIDNYIFNMDQYKISEAIKVVLE 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L +  ++Y + + PW L+K N  +   TVL      I  ++ LL+  +      + +   
Sbjct: 416 LSNACNKYIEIKTPWNLEKENRIEELKTVLATLQRNIAIISYLLKPVLVNSYTDMIEQSG 475

Query: 479 VADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
           + +    F  L     +K   + +K    IF R 
Sbjct: 476 LENVQINFSDLKTFSNIKFNKLNNKKV--IFNRI 507


>gi|326482096|gb|EGE06106.1| methionine-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 592

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 186/539 (34%), Positives = 278/539 (51%), Gaps = 30/539 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           + +  Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 51  KPKPYYVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  +   D+N   F+ +A   + SYD FIRTT+  H    +  W+ ++ +G IY+
Sbjct: 111 ALQNGLEPQALCDRNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYE 170

Query: 122 GCYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           G + GWYS+ DE +Y    V+       G            V++ +E  Y F+LSA+QD+
Sbjct: 171 GKHEGWYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDR 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P+FI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+D
Sbjct: 231 LLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H
Sbjct: 291 ALVNYITYAGYPFTPGREQESIWPADIHVVGKDITRFHCIYWPAFLMALDLPLPRTILTH 350

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                   K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     
Sbjct: 351 AHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNI 410

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCSRVLQEIRENMQ 406
           L  G+GNL SR +     +    +           A   S+   +    +V   +   M 
Sbjct: 411 LQGGLGNLCSRVMRGKGWNVRESVVKMANGQGSRRAKDPSEIEHMEFLEKVPGLVSNQMD 470

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAI 460
                RAL +++ ++ + +RY  +  PW L K   T+P   D+   V+Y   E +R   I
Sbjct: 471 ELNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEASTDPTAHDQLVGVIYNATESLRIAGI 530

Query: 461 LLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKP--GFMLHKTFDP----IFPRFL 511
           LLQ F+P+ A K+ D+L V ++   R + +      P  G             +FP  L
Sbjct: 531 LLQPFMPEKAKKLLDMLGVEEDLSKRSYAAAKYGADPDYGTPRVPLGKGQAGTLFPPLL 589


>gi|297669110|ref|XP_002812749.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1
           [Pongo abelii]
          Length = 613

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 190/546 (34%), Positives = 277/546 (50%), Gaps = 50/546 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 64  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      DQ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 124 ATAGLAPTELCDQVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 183

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS +++ L 
Sbjct: 184 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFREPLQ 243

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 244 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 303

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H  
Sbjct: 304 VNYLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 360

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 361 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 420

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +   +             PG           D +++S  + + +++
Sbjct: 421 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 480

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 481 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 540

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFD 504
             LLQ   P LA+K+   L V+   R    L               +RL P   L     
Sbjct: 541 GTLLQPVTPSLADKLLSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLGPETGL----- 595

Query: 505 PIFPRF 510
            +FPR 
Sbjct: 596 -LFPRL 600


>gi|108563402|ref|YP_627718.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837175|gb|ABF85044.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 643

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 195/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LS Y+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSTYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASM 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSATKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLF 506


>gi|297380215|gb|ADI35102.1| methionyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 653

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCTISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYKKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFACTRHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPHNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|217034348|ref|ZP_03439764.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
 gi|216943233|gb|EEC22700.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
          Length = 645

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMVHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITVYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|37196758|dbj|BAC92749.1| mitochondrial methionyl-tRNA synthetase [Homo sapiens]
          Length = 593

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 189/546 (34%), Positives = 275/546 (50%), Gaps = 50/546 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS ++  L 
Sbjct: 164 VYEGWYCASDECFLPEAKVTQQPGPSGDSFPVSLESGHPVSWTKEENYIFRLSQFRKPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P+++  H  
Sbjct: 284 VNYLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +   +             PG           D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFD 504
             LLQ   P LA+K+   L V+   R    L               +RL P   L     
Sbjct: 521 GTLLQPVTPSLADKMMSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLGPETGL----- 575

Query: 505 PIFPRF 510
            +FPR 
Sbjct: 576 -LFPRL 580


>gi|330799736|ref|XP_003287898.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
 gi|325082101|gb|EGC35595.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
          Length = 566

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 178/512 (34%), Positives = 275/512 (53%), Gaps = 26/512 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K+ I+T I Y N  PHIGH Y  ++ D  AR++R  G D  F TGTDEHG K+ +AA
Sbjct: 32  NKKKILITTPIFYVNGPPHIGHLYTALLGDAFARWNRFKGNDTYFMTGTDEHGMKVDEAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+ T  + D  S  F+++  + +I YDDFIRTTE RH D    +W ++ +KG IYKG
Sbjct: 92  KKKGLKTIDYCDSISNRFKELFKLSEIQYDDFIRTTEPRHRDAVTAMWNRLLEKGYIYKG 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGA-----------DGQYYNAQHNPVQWMEEEGYFFRLSA 171
            Y GWY   DE++  DD+V +G                     + V W+EEE Y F+LS 
Sbjct: 152 VYKGWYCTSDESFLTDDQVMEGMSPITPNNPVSKKCMVSKESGHEVTWVEEENYMFKLSE 211

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMY 229
           +  K+ ++ +     I P     ++++ +  G++DLS+SR      WGI +P+DP   +Y
Sbjct: 212 FASKVENWIQDLNP-IFPATHTKQLLAMISQGVRDLSISRPSSRITWGIPVPNDPSQTIY 270

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           VW+DALTNYLT TGY        + +W    H+IGKDI++FH +YWP+FL++A  P+ K 
Sbjct: 271 VWLDALTNYLTVTGYPKVDPNDPSSYWSNTHHIIGKDIIKFHCLYWPSFLMAAEYPVQKG 330

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           V  H       EK+SKS GNV+DP E I+  G++ +RYFL++      DG +    +  R
Sbjct: 331 VLCHAHWTVNREKMSKSRGNVVDPFESIQNYGLEVIRYFLLKGGGLEDDGDWSDHEISVR 390

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRE 403
           + ADLA+  GNL+SR     L              +    TE D  +L+ C +++     
Sbjct: 391 LKADLADTYGNLLSRCTGKPLHPSGHWPKSVNLDESSTLLTEKDIQLLNHCKKLINGATV 450

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK------KTNPDRASTVLYVTVEVIRQ 457
           N         + ++++ + + + Y   QKPW L         +P R +T++Y+ +E+IR 
Sbjct: 451 NFDKGDFKNGIYEILAFLYDCNGYIQEQKPWTLAPKPNRPNADPVRLNTIMYIALEMIRI 510

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            ++LL   +P  A    + L +  + R  Q+L
Sbjct: 511 ASLLLLPVIPSSATLALNQLDIPLDQRNHQNL 542


>gi|315586930|gb|ADU41311.1| methionine--tRNA ligase [Helicobacter pylori 35A]
          Length = 650

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 299/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    ++    D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASTFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|50364851|ref|YP_053276.1| methionyl-tRNA synthetase [Mesoplasma florum L1]
 gi|50363407|gb|AAT75392.1| methionyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 509

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 184/511 (36%), Positives = 283/511 (55%), Gaps = 12/511 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y++T I YP+   HIGHAY   +AD+L R+  + G +  F TG+DEHGQKI + A  
Sbjct: 3   KKFYVTTPIYYPSGNLHIGHAYTTTLADILKRYKDMQGYETFFLTGSDEHGQKIEEKATE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T   +++    +F+ +   L I Y  FIRTT+  H +T + ++  + DKG IYKG Y
Sbjct: 63  AGLTPIDYLEDKVESFKTLWKALKIDYTKFIRTTDSYHEETVKKIFTLLLDKGFIYKGNY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E + N D++    +       +  ++ ++EE YF + S +Q+ + +      
Sbjct: 123 EGLYCISCEEFLNADQI---DENNMCKISNTKLELVKEETYFLKTSLFQEFMENEV-LAS 178

Query: 185 EFILPIERRNEVIS-FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EF++P  RRNE+++ FVK  LKDLS++R +F WGI I +DP++++YVW+DALTNY+T  G
Sbjct: 179 EFLIPAYRRNEMLNSFVKPELKDLSVTRTSFSWGIPINEDPKHVVYVWLDALTNYITALG 238

Query: 244 YLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           YL N D +  KFW  +    L + GK+I+RFH+IYWP  L S  L  P  +  HG+IL K
Sbjct: 239 YLQNDDSNFQKFWADENTEILQLAGKEIIRFHSIYWPIILKSLGLRQPTHLLGHGWILSK 298

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNVIDPIE+I + G DALR+++  E+   KDG +  D   +  NA LAN +G
Sbjct: 299 DTKMSKSLGNVIDPIEMINKYGADALRFYIGYELPTEKDGNFTDDLFIESFNAHLANNVG 358

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL+SR   MI K +DG I         D+++ +     +    +NM    I  A+  ++ 
Sbjct: 359 NLISRINQMITKYFDGFIENDNIV--YDDNLTAKGIETINLYIQNMDQYKISDAIRNILD 416

Query: 420 LVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L +  ++Y +   PW L K    D    V+      I  +  LL+  + +    + + + 
Sbjct: 417 LGNACNKYIEETMPWNLAKEEKIDELKNVMATLQRNISIMVFLLKPILVENYEDMIEQIG 476

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           ++     F  ++   K  F        IF R
Sbjct: 477 LSGVELTFDKINNWDKIIFKKLGDKKIIFKR 507


>gi|210135200|ref|YP_002301639.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133168|gb|ACJ08159.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 650

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 297/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETALLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMVHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSATKLASAFNTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLF 506


>gi|309806717|ref|ZP_07700712.1| methionine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166897|gb|EFO69081.1| methionine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 608

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 179/468 (38%), Positives = 281/468 (60%), Gaps = 12/468 (2%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
              K++K A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    + +++++
Sbjct: 3   TVLKLSKKAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKIFERL 62

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFF 167
             +GDIY G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YFF
Sbjct: 63  LKQGDIYLGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYFF 122

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQY 226
           R+S Y D+LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP++
Sbjct: 123 RMSKYADRLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPKH 182

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++YVWIDAL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LPL
Sbjct: 183 VVYVWIDALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPL 242

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK++F HG++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  +  
Sbjct: 243 PKQIFGHGWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPEDF 302

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +RVN DLAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E M
Sbjct: 303 VERVNFDLANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQM 362

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQA 464
                 +AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++ 
Sbjct: 363 DALHFSKALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIRP 422

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
            + +    IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 423 IMTQSPVHIFEQLGLSLDDANAASLCWGAY-GWQNYVTKNPKPIFPRL 469


>gi|283954409|ref|ZP_06371929.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794026|gb|EFC32775.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 625

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 192/507 (37%), Positives = 303/507 (59%), Gaps = 11/507 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNF 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISSEFKKLWDEFEITYDIYARTTDIRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++    +           + ++EE YFF+LS YQDK+L +Y+     I
Sbjct: 123 YCVSCESFFTQSQL---INEYSCPDCGKQTRILKEESYFFKLSKYQDKILQWYQEKDP-I 178

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           LP  ++NE+++FV++GLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 179 LPKNKKNELVNFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDF 238

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 239 --QCKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P E+++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 297 KSKGNVVKPKEMVDAYGSEAFRYFLLREVPFGIDGDFSENMLINRINAELSNEFGNLLNR 356

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M +K   G I         +   L+     L    E ++N   +R L ++   +S  
Sbjct: 357 IIGMSIKYSQGNISKENVLKFYNAE-LNQTKEHLNLAVEFLENLQCNRYLEELFKALSVA 415

Query: 425 DRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      +PW L K N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +
Sbjct: 416 NLAISKYEPWNLIKENKHEQANALIALCANILAKTSLLLSPALPKSCQKVALALNFEISS 475

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +  +    +       + + +FP+ 
Sbjct: 476 INYTKIILNNELLDFKANSCEALFPKI 502


>gi|123507933|ref|XP_001329523.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121912479|gb|EAY17300.1| hypothetical protein TVAG_266630 [Trichomonas vaginalis G3]
          Length = 710

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 183/511 (35%), Positives = 288/511 (56%), Gaps = 10/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++T I Y N  PHIGH +   + + ++ +++L G+D +++TGTDEHG K+   A +
Sbjct: 198 KPMCLTTPIYYVNGVPHIGHVFTTTLVETISNWYKLRGIDCIYSTGTDEHGLKVQTTAAS 257

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   K + D+ S+ F D  +  D+  D FIRTT++ H      LW  + +KG IY+G Y
Sbjct: 258 KGFLPKEWCDKTSKTFFDAFEQFDLHPDVFIRTTDENHIKVATKLWTILHEKGYIYEGKY 317

Query: 125 SGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            GWYS R+E +  +++    V  G +    +     ++W  E  + F+LSA Q +LL +Y
Sbjct: 318 EGWYSKREECFVPENQIKVVVENGVEKHINSEDGAELEWSSETNWMFKLSAMQQQLLDWY 377

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +++P  I P    N +   V  GL DLS+SR+   WGI +P+DP+  MYVWIDAL NYLT
Sbjct: 378 DANPTCITPRPYYNLIKLMVSRGLNDLSVSRQNVTWGIPVPNDPKQTMYVWIDALANYLT 437

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             G+    +      WP D+H +GKDI++FHAIYWPAFL++A +P  K++  HG+     
Sbjct: 438 VAGWDGEGNF---GRWPCDIHTVGKDIVKFHAIYWPAFLIAAGIPCYKRLLVHGWWTKNE 494

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKSLGN +DPI +++  G++A++Y+L+RE     D  Y    +  R N DLA+ + N
Sbjct: 495 EKMSKSLGNTLDPIVLMKFWGLEAVKYYLLRECTLVSDSDYSDKAMLNRYNNDLADVLWN 554

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R +S  L   D ++PTPG + E D+ ++     +   +   M       AL  + + 
Sbjct: 555 LVIRIISKKLCP-DMVVPTPGEYQEVDKDLIESIVTIPGTVDHFMAFGETRHALDSIFAS 613

Query: 421 VSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + ++++Y    +PW+L K T+  R +TV Y  +E +R LA  L  F+P+ A  I + L V
Sbjct: 614 IHDLNKYLTDMQPWKLVKETDLSRYNTVFYTLLECLRILATSLYCFMPQTATTILNGLGV 673

Query: 480 ADENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
                  +      LKPG  L +    +FP+
Sbjct: 674 GKNFPPEEIFKYGFLKPGTKLMEGMPILFPK 704


>gi|297264625|ref|XP_001086799.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1
           [Macaca mulatta]
          Length = 593

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 189/544 (34%), Positives = 279/544 (51%), Gaps = 50/544 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAAQN 64
           Y +T I Y NA PHIGH Y  ++AD L+R  RL G       F+TGTDEHG KI +AA  
Sbjct: 46  YFTTPIFYVNAAPHIGHLYSALLADALSRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+      D+ S++F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG Y
Sbjct: 106 AGLAPTELCDRVSKHFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKGVY 165

Query: 125 SGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            GWY   DE +  + +V +     G          +PV W +EE Y FRLS +++ L  +
Sbjct: 166 EGWYCASDECFLPEAKVTRQLGPLGDSFPVSLESGHPVSWTKEENYIFRLSQFREPLQRW 225

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
              +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL N
Sbjct: 226 LRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDALVN 285

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H    
Sbjct: 286 YLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWT 342

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ 
Sbjct: 343 VCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADA 402

Query: 358 IGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEIRE 403
           +G L++R  +  +   +             PG           D +++S  + + +++ +
Sbjct: 403 LGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSSVATLPKQVAD 462

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAI 460
           +  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    
Sbjct: 463 HYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGT 522

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFDPI 506
           LLQ   P LA+K+   L V+   R    L               +RL P   L      +
Sbjct: 523 LLQPVTPSLADKLLSRLGVSASERNLGELYFLPRFYGHPCPFEGRRLGPETGL------L 576

Query: 507 FPRF 510
           FPR 
Sbjct: 577 FPRL 580


>gi|317012812|gb|ADU83420.1| methionyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 650

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 196/507 (38%), Positives = 297/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A  
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSASL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSTKITAYYSKELEKAHQILDNANSFVPRMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAAKLASAFHTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLF 506


>gi|188527820|ref|YP_001910507.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144060|gb|ACD48477.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 662

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPHNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|66808845|ref|XP_638145.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996820|sp|Q54MZ8|SYMM_DICDI RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|60466665|gb|EAL64717.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 575

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 181/509 (35%), Positives = 282/509 (55%), Gaps = 23/509 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++K+ I+T I Y N  PHIGH Y  ++ D L R++R  G D LF TGTDEHG K+ +A
Sbjct: 40  EDKKKVLITTPIFYVNGPPHIGHLYSALLGDALGRWNRFIGNDTLFMTGTDEHGSKVDEA 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+ T  + D+ S  FR++ D  DI YDDFIRTTE RH +    +W ++ ++G IYK
Sbjct: 100 AKKNGLKTIDYCDKISNRFRELFDKADIKYDDFIRTTEPRHKEAVTAIWNRLLERGYIYK 159

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGA-----------DGQYYNAQHNPVQWMEEEGYFFRLS 170
           G Y GWY   DE++  DD+V +G                     + V W+EEE Y F+LS
Sbjct: 160 GVYKGWYCTSDESFLTDDQVTEGMSPITPQNPISKKCMISLESGHEVNWIEEENYMFKLS 219

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIM 228
            +  K +  +    + I P    N +   +  G+KDLS+SR      WGI++P+DP   +
Sbjct: 220 EF-SKTIENWFEEVKPIFPAIHVNLLRYMLSQGIKDLSISRPSSRIPWGIEVPNDPSQTI 278

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288
           YVW+DALTNYLT TGY +    S    W    H+IGKDI++FH++YWP+FL++A+ PLPK
Sbjct: 279 YVWLDALTNYLTVTGYPNVSPNSSQSHWSNATHIIGKDIIKFHSVYWPSFLIAADYPLPK 338

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +  H       EK+SKS GNV+DP   I+  G++ +RYFL++      DG + +  L  
Sbjct: 339 SIICHAHWTVNREKMSKSRGNVVDPFLAIDNHGLELIRYFLLKGGGLENDGDWSEHELAV 398

Query: 349 RVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           R  +DLA+  GNL+SR     L    ++   +     FT  D+ ++   S +++ +  + 
Sbjct: 399 RFKSDLADTYGNLISRCTGKALNPSGEWPKSVTDTSLFTMDDQKLIENSSILVKSVSTHY 458

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWEL------KKTNPDRASTVLYVTVEVIRQLA 459
                   + ++++ + E + Y   Q PW+L        ++  R +T++Y+ +E+IR  +
Sbjct: 459 DRGDFKSGIFEIMTFLYECNLYVQNQAPWKLVPKPNRVGSDLIRLNTIIYIAIEMIRITS 518

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQS 488
           +LL   +P  +N   + L +  ENR   S
Sbjct: 519 LLLSPIIPTSSNLTLNYLSIPLENRSNPS 547


>gi|308063822|gb|ADO05709.1| methionyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 650

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 195/510 (38%), Positives = 299/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPHNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|293390593|ref|ZP_06634927.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951127|gb|EFE01246.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 686

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 134/543 (24%), Positives = 240/543 (44%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A
Sbjct: 4   NKRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +D   +         +IS+D++  T  + + +   +++ ++ + G I   
Sbjct: 64  DQMGITPEQLIDDVRQKHMADFAGFNISFDNYHSTHSEENRELSELIYSRLKENGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------- 158
             S  Y      +  D  V             G + +   A +NP +             
Sbjct: 124 TISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYNPTELINPRSVVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
            +IP+      YVW+DA   Y+ +   L           FW  D      H IGKDI+ F
Sbjct: 241 FQIPNAEGKYFYVWLDAPIGYMASFKNLCKRESYIDFDGFWHKDSDAELYHFIGKDIMYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A+   P  +F HG++   GEK+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGADFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN DL N + NL SR+V  I K +DG +    A +  D++
Sbjct: 361 AKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNVGFIQKRFDGKL----AASLDDKA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           +        ++I    +N+   +A+ ++++L  + ++Y D + PW + K          V
Sbjct: 417 LFDEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYIDDKAPWVIAKEAGKDAELQAV 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + +++ R L   L+  +PKLA +    L        + +L Q L     +   F  +F
Sbjct: 477 CSMGIQLFRVLMGYLKPVLPKLAERAEAFLQ---SKLTWANLAQPLL-NHQI-APFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 SRL 534


>gi|322832460|ref|YP_004212487.1| methionyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167661|gb|ADW73360.1| methionyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 676

 Score =  361 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 237/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIRPEEMIAEMSQEHQKDFAGFGISYDNYHSTHSDENRELSALIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVL 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E YFF L  +   L ++  S     L  +  N++  + + GL+   +SR    +G +
Sbjct: 186 RDSEHYFFDLPEFSAMLQAWTRSGA---LQEQVANKMQEWFEHGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDRRSDLNFDEFWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     +  +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLNHLDADCLRYYYTAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A T +DE++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGKL----ADTLADETLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +   + I +   ++   RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAAESIAQAYDSRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + ++ Q L     ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLSERTEAFLNTT---LDWDAIAQPLLS-HQVN-PFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|261839774|gb|ACX99539.1| methionyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 653

 Score =  361 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 297/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMVHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +   P+F + 
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTKPLFSKI 509


>gi|315453125|ref|YP_004073395.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132177|emb|CBY82805.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 615

 Score =  361 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 180/505 (35%), Positives = 284/505 (56%), Gaps = 18/505 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++T I Y N  PH+GHAY   IAD+L +++ L   DV   TGTDEHGQKIA++A    V
Sbjct: 4   LVTTPIYYVNDVPHLGHAYTTFIADMLKKYYALRADDVFLLTGTDEHGQKIAQSALKHQV 63

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           +   +  + S  FRD  D   I YD FIRTT+  H    +  ++ +  +GDIYKG Y G 
Sbjct: 64  SPLEYASKISSKFRDQWDFFGIDYDHFIRTTDDSHMFAVQYAFEAMLARGDIYKGTYKGA 123

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E++   +                    +EEE YFF LS YQD+LL +Y  +P+ I
Sbjct: 124 YCVSCESFVTGE--------ARCPDCQRETSILEEESYFFALSKYQDRLLDFYAKNPKTI 175

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGY 244
           LP  R +EV+ F++ GL DLS++R +F+WGIK+P   +DP++++YVW+DAL NY++  GY
Sbjct: 176 LPTYRTHEVLRFIEQGLHDLSITRTSFEWGIKLPKNLNDPKHVVYVWLDALLNYVSALGY 235

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +     K  ++   +HV+GKDILRFHAIYWPAFL+S  LPL K +  HG+   +G K+S
Sbjct: 236 PNGG---KMGYFDHAIHVVGKDILRFHAIYWPAFLMSLELPLFKHLCVHGWWTIEGVKMS 292

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS+GNV+    + +  G D LRYFL+RE+  G+DG + ++ L +R NADL+N +GNLV R
Sbjct: 293 KSIGNVLCAQSIAQTYGRDVLRYFLLREVPLGQDGDFSQEALLRRANADLSNTLGNLVQR 352

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              M  + ++G + +     E  +        +   +  +M+    H+ L  +  +    
Sbjct: 353 LSGMAGRYFEGRVQSTHTL-EHYKEDYETLHALFAPLDGHMEAMQPHKYLEDLWKVFEGA 411

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +      +PW++   +  +   +L +   ++ +    L   +P+ A K+  +L V    +
Sbjct: 412 NALIARTEPWKM--QDQTKIMALLGLIATLLVKSVYYLYPIIPESAQKLATLLGVELSPK 469

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPR 509
            F ++ ++ KP  ++ +   P+FPR
Sbjct: 470 GFSAICEQ-KPLSLVLEKTPPLFPR 493


>gi|125834886|ref|XP_694935.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Danio
           rerio]
          Length = 595

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 195/539 (36%), Positives = 287/539 (53%), Gaps = 35/539 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +  YI+T I Y NA PHIGH Y  + AD L R+  L   +    TGTDEHG KI +A
Sbjct: 42  QSPKAYYITTPIFYVNAAPHIGHVYSAVTADCLHRYKLLQRYNSRLATGTDEHGLKIQQA 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A +AG     F  + S +F+ +     ISY D+IRTTEKRH       W  +  KG IYK
Sbjct: 102 AGSAGKDPLNFCTEVSESFKHVFQRCGISYTDYIRTTEKRHRQAVEHFWTVLLSKGYIYK 161

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS  DE++  + +V    D +    +      + V+WM E+ Y FRLS ++ +L
Sbjct: 162 GTYEGWYSTPDESFLTETQVTDSTDSEGRRIKVSTESGHKVEWMNEDNYMFRLSDFRTQL 221

Query: 177 LSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           L +  S+P  I P++ ++   + +         +S  +    WGI +P DP+  +YVW+D
Sbjct: 222 LHWLRSNPNTIQPVKFQHLVLQWLEDDDIPDLSVSRQKSRLQWGIPVPGDPEQTIYVWLD 281

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY  N     +K+W    HV+GKDIL+FHAIYWPAFLL+A L LP+K++ H
Sbjct: 282 ALVNYLTVVGYPQNH----SKWWSVVHHVVGKDILKFHAIYWPAFLLAAGLALPQKIYVH 337

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                KG+K+SKS+GNVI+P+E IE+  VD LRYFL+R+     D  Y  D + K  N++
Sbjct: 338 SHWTVKGKKMSKSIGNVINPLESIEKFTVDGLRYFLLRQGVPDSDCDYYDDKVMKMCNSE 397

Query: 354 LANGIGNLVSRSV-----------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           LA+ +G L++R                   +  + P+  A +E D  ++   S +   I 
Sbjct: 398 LADALGGLLNRCAAPSLNPTQVYPRFSTSCFPAVGPSGKAVSE-DYRMIEAVSALPGIIE 456

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLA 459
           ++ +N  +++AL  + + V   + +     PW L + NP+      T+L+V++E +R   
Sbjct: 457 QHFENLYVYKALEAIGACVRLTNGFVQRHAPWRLDRNNPEEQQWLDTILHVSLECLRIYG 516

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD--------QRLKPGFMLHKTFDPIFPRF 510
           ILLQ  VP LA+KI   L V  E R + SL+        +    G  L      +F R 
Sbjct: 517 ILLQPVVPDLADKILSRLGVTPEERSWNSLNFLNKFQGRECALEGRALGPDLGVLFSRL 575


>gi|317180163|dbj|BAJ57949.1| methionyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 650

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPNHYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|20094286|ref|NP_614133.1| methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|25009365|sp|Q8TX28|SYM_METKA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19887329|gb|AAM02063.1| Methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 668

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 151/540 (27%), Positives = 244/540 (45%), Gaps = 43/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ ++TA+AY N   HIGH     + ADV  RF ++ G+D +   GTD HG  IA  A+ 
Sbjct: 3   KVLVTTALAYTNGPLHIGHVRSTYLPADVYTRFLKMRGIDAIHIGGTDNHGVPIALQAEL 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDTCRILWKKISDKGDIYK 121
            G   +  V++     ++  + L+I +D+F  T       H D  +  +K++ + G I +
Sbjct: 63  EGKDPEEIVEKYHEMIKEDLERLNIHFDEFSCTCREFNPDHVDMTQWFFKRLYEAGYIEE 122

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE------- 163
                 Y    E    D  V            +G   +       PVQ  E         
Sbjct: 123 REVEQLYCPECERPLPDRYVEGVCPYCGAEGARGDHCEACGRYLEPVQLEEPRCVICGSK 182

Query: 164 -------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                    FF+LS +++ L  + ES+    LP   RN  I +V+ GLKD  + R   DW
Sbjct: 183 PEVRRTMHLFFKLSEFEEDLKKWLESNDN--LPKNVRNYAIQWVREGLKDWDIVRD-LDW 239

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           G+ +P +     + YVW DA   Y+T T    +  G   K +        +H IGKDI+ 
Sbjct: 240 GVPVPLEGYEDKVFYVWFDAPIGYVTFTKQYCDRVGQDWKDYWFSEDTKIVHFIGKDIIV 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            HA++WPA L+     LP  + +  ++  +GEK+S S G V+   +  +    D LRY+L
Sbjct: 300 HHALFWPAMLMGVGATLPYTIVAGEYLTLEGEKMSTSRGWVVWVKDFTKLFPADLLRYYL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  +     + RVN +L   +GN V R++S I +  DG +P      E+D+ 
Sbjct: 360 IVVSPLTRDADFSWGDFRDRVNNELVANLGNFVYRTLSFIYRFLDGNVPEA----ETDQE 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           I+       Q + E+++      AL +V+ L    + YF   +PW+LK  +P+R + VL 
Sbjct: 416 IVDKIKETHQRVTEHLEKFRFREALTEVLRLSKFGNEYFQEHEPWKLKDEDPERCAEVLR 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               +++ LA++L  F+P  A KI+  L   D        +             +PIFP+
Sbjct: 476 GCARIVKALAVMLAPFLPDSAEKIWQSLGYEDSVHDVDWEEALEDVETKEIPEPEPIFPK 535


>gi|317009649|gb|ADU80229.1| methionyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 650

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 193/507 (38%), Positives = 299/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +    +D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTSDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAIEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+ +     
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLANAFNTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLF 506


>gi|308062316|gb|ADO04204.1| methionyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 653

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 194/510 (38%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  +K + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFKIMFEKGDIYKGVY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRL+AY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLNAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMVHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPHNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|283832453|ref|ZP_06352194.1| methionine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072113|gb|EFE10222.1| methionine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 677

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 248/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + ++GL+   +SR +  +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFEAGLQQWDISRDSPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P LA ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLAERVEAFLN---SELGWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|156040341|ref|XP_001587157.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980]
 gi|154696243|gb|EDN95981.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 579

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 184/528 (34%), Positives = 290/528 (54%), Gaps = 23/528 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y NA PH+GH Y M++ADV  R+  L G   +  TGTDEHG KI +AA 
Sbjct: 46  KKPYYVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKGETAILCTGTDEHGMKIQRAAA 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   K F D  +  F+ +A    +S D F+RTT++ H +T   +W  + ++  IY+  
Sbjct: 106 QAGTLPKEFCDNGAETFKKLAQRAGLSNDHFVRTTDQDHKETVEYVWYMLKEREYIYESK 165

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY------YNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           + GWY + DE +Y +  + K  D                V+W  E+ Y FRLSA++D+LL
Sbjct: 166 HEGWYCVSDETFYPESVIEKRLDPFTGRTFIASQETGKEVEWTSEKNYHFRLSAFKDQLL 225

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
            +YE +P+F++P+ R  +V++ V  GL+DLS+SR      WGI++PDD    +YVW+DAL
Sbjct: 226 EFYERNPDFVVPLTRMKDVVNQVSKGLEDLSISRPSDRLSWGIRVPDDDSQTIYVWLDAL 285

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY+T   Y   P    A  WPAD+ VIGKDI+RFH IYWPAFLL+ NL  PK++ +H  
Sbjct: 286 VNYITKASYPWAPGNEAAGGWPADVQVIGKDIVRFHCIYWPAFLLALNLQPPKRILTHAH 345

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                +K+SKS+GNV++P   ++  GVD +RY+L+ +    +D  Y  + + +R    L 
Sbjct: 346 WTMDNQKMSKSVGNVVNPFFAMDRFGVDVMRYYLIHDGGIKEDSSYGNEYIVERYKKGLQ 405

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-----LSVCSRVLQEIRENMQNQLI 410
            G+GNLVSR     + +    +    +    +  I     +++ + V  +  + MQ    
Sbjct: 406 KGLGNLVSRLTRPKVWNVRSCVEAAHSEGLHNSDISTNQQIALLNNVRPKANDKMQELNP 465

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFV 466
             AL  ++  V E ++Y   + PW L K+      ++  + +Y + E IR + ILLQ ++
Sbjct: 466 AAALHVIMDTVFETNKYLQEEAPWSLAKSEEPNAKEKLISAVYHSAEAIRIVGILLQPYM 525

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGF-----MLHK-TFDPIFP 508
           P+ A+ + D++ V  E R ++       P +      L K  +D +FP
Sbjct: 526 PEKASLLLDMIGVIPERRTYEYATLGADPSYGDAQVPLGKCAWDALFP 573


>gi|308184777|ref|YP_003928910.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060697|gb|ADO02593.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 650

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 195/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSDKITAYYPKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKLASAFCVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMILQDTEPLF 506


>gi|323130480|gb|ADX17910.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 704

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 153 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 212

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 213 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 269

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 270 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 329

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 330 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 389

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 390 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 445

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 446 YKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAIC 505

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 506 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 560

Query: 509 RF 510
           R 
Sbjct: 561 RI 562


>gi|321468691|gb|EFX79675.1| hypothetical protein DAPPUDRAFT_319387 [Daphnia pulex]
          Length = 558

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 195/525 (37%), Positives = 274/525 (52%), Gaps = 23/525 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
            + E  +I+T I Y NA+PHIGH Y  ++AD  ARFHRL G   V+F+TGTDEHG KI +
Sbjct: 38  TKNEPYFITTPIFYVNAEPHIGHVYTAVLADSSARFHRLIGCSPVVFSTGTDEHGLKIQQ 97

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           A+  A      F DQ S  F++  D  +I Y D+IRTTE RH +     W  +SDKG IY
Sbjct: 98  ASLQANKDPSQFCDQVSVLFKNALDECEIGYTDYIRTTENRHKENVHSFWNILSDKGYIY 157

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG Y GWY   DE +  +D+        G + +     + PV+W  EE Y F+LS  + +
Sbjct: 158 KGKYEGWYCTADETFVTEDQTTLLKLPDGREQRVSTESNRPVEWFSEENYLFKLSKLRGE 217

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL +  S P    P+   N V S+++  L DLS+SR      WGI +P+DP   +YVW+D
Sbjct: 218 LLKWLISGPVVR-PVRHYNLVKSWLEQDLVDLSVSRPRARLSWGIPVPEDPSQTIYVWLD 276

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T          S    WP  +HVIGKDIL+FH+IYWPAFLL+A    PK +  H
Sbjct: 277 ALLNYMTVAK----HSHSDKNIWPPSVHVIGKDILKFHSIYWPAFLLAAGFDPPKCLLVH 332

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G  L   +K+SK+ GNV+ P   I+      LRYFL+ E     DG +    L +  N++
Sbjct: 333 GHWLADDQKMSKTTGNVVSPQSCIDIATATGLRYFLLHEGVPASDGNFSMTKLVRIANSN 392

Query: 354 LANGIGNLVSRSVSMILK----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           LA+GIGNLV+R     L               A       +L +  R    + E      
Sbjct: 393 LADGIGNLVNRCCGKNLNPSQIRLAVSPSDFEACGSPGLELLDLLQRTPDIVYEEYLQWN 452

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPK 468
            ++ + Q+++LV   + +F   +PW+LKK    D+ +  L +T+E  R +  LLQ  VP 
Sbjct: 453 FYKGIDQIMALVRGANGFFQTMEPWKLKKEGKIDKLNASLAITMETARVVGTLLQPIVPS 512

Query: 469 LANKIFDILFVADENRCFQSLDQRLK---PGFMLHKTFDPIFPRF 510
            + ++ D L V  ENR +     RL+       L      +FP+ 
Sbjct: 513 YSERLLDKLGVPRENRDWN--FARLRSSTADTSLGAQGTVLFPKI 555


>gi|325959090|ref|YP_004290556.1| methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330522|gb|ADZ09584.1| Methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 658

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 151/535 (28%), Positives = 254/535 (47%), Gaps = 35/535 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ IS+A+ Y N   H+GH     I AD+ AR++R+ G DVLF   TDEHG  IA  A+ 
Sbjct: 3   KVLISSALPYANGPCHLGHLRSTYIPADIYARYNRMKGNDVLFVCATDEHGTPIAVKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   K    +     +   +  +IS D F RTT+ +H++  +  + K+ +KG IY+   
Sbjct: 63  EGKPPKEVAGRYHEMIKTDLESCNISLDSFTRTTDPKHYEISQNFFLKLYEKGYIYEKVI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y      +  D  V                                      +  + 
Sbjct: 123 KQPYCEECGRFLPDRYVEGTCPFCETEGARGDHCESCGRHLEPTQLLEPQCQICGSTPEI 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E + YFF+LS +QD+L  + E + E  LP   RN  + ++K GLKD  L+R   +WGI 
Sbjct: 183 RESKQYFFKLSHFQDQLQEWIEGNHE--LPPNVRNYALQWLKEGLKDWILTRD-MEWGIP 239

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYW 275
           +P +     I+YVW +A   Y+++        G   + +  D  LH IGKDI+  H+I+W
Sbjct: 240 VPLEGAEGKIIYVWGEAFLGYISSAAQWSEKTGKPWEEYWNDRPLHFIGKDIIYHHSIFW 299

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++    LP  V +  ++  +G K+S S   VI   + I+    D LRY+LV     
Sbjct: 300 PALLMAYGCKLPYTVIAGEYLSLEGSKMSTSKNWVIWVSDFIKNFDSDILRYYLVANAPL 359

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  D  ++RVN +LA+ IGN + R+ +   + +DG +P PG F + D    +   
Sbjct: 360 SKDTDFSWDDFQRRVNDELADVIGNFLHRTFTFTNRFFDGKLPAPGEFDDYDREFETKIK 419

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + +   ++       + ++I L    ++YF+ ++PW+  KT+   A+  LY+  ++ 
Sbjct: 420 ALPKLVGGLIEEFKFREGMMEIIKLSKYGNKYFNDKEPWKAVKTDKAGAANCLYLANQLA 479

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + LA+ L  ++P    +IF  L + D    +    + ++ G  + +   PIF + 
Sbjct: 480 KTLAVSLTPYLPVKTLEIFKTLKI-DPVLNWDDGAKFMEEGHEIAEP-KPIFLKI 532


>gi|255936271|ref|XP_002559162.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583782|emb|CAP91800.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 570

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 195/527 (37%), Positives = 275/527 (52%), Gaps = 23/527 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
           +  +  Y++T I Y NA PH+GH Y M+IAD++ R+  L G  D    TGTDEHG KI +
Sbjct: 47  RSNKPYYVTTPIFYVNAAPHVGHLYTMVIADIMKRWQVLLGNTDAQLLTGTDEHGMKIQQ 106

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AG+ T+ F D N R F  +A   +I  D FIRTT+  H D  +  W+ +  +G IY
Sbjct: 107 AAIQAGMDTQAFCDMNCRTFEALAKAANIDNDHFIRTTDPAHRDAVQYFWEMLQHRGYIY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
              + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA++D
Sbjct: 167 TSRHEGWYSVSDETFYPQTQVQNSLDPSTGRKRMVSIETGKEVEWSSETNYHFRLSAFKD 226

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
           +LL  Y+    FI P      VI+ V++GL+DLS+SR T    WGI +P D    +YVW+
Sbjct: 227 RLLDLYKREDPFISPTSYTAAVINGVETGLQDLSISRPTERLTWGIPVPGDDTQTIYVWL 286

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY   P       WPADLHV+GKDI+RFH +YWPAFL++ +LPLP+ V  
Sbjct: 287 DALVNYLTKAGYPFPPGQENTSAWPADLHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 346

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG      EK+SKS GNV++P   IE  GVD +R+FL        D  +D   + +    
Sbjct: 347 HGHWTMNHEKMSKSTGNVVNPFFAIERFGVDGMRFFLAYRGGLADDADFDNSFIIRDYKK 406

Query: 353 DLANGIGNLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            L  GIGNL  R++     +      D +     A T  D     +  +   ++ E M+N
Sbjct: 407 LLQGGIGNLALRTIGCARGNLRSYIMDALSNKLPAATPEDLDHQKMLEQTPPKVAEFMEN 466

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                AL + +S++ + ++YF A +PW   KT+  RA   +Y   E +R   ILLQ F+P
Sbjct: 467 LNPRAALQETMSIIEKTNKYFHAAEPW---KTSNSRA---IYNVAESLRIAGILLQPFMP 520

Query: 468 KLANKIFDILFV---ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             ++ + ++L V       R F +      P +        +FP  L
Sbjct: 521 GKSHDLLELLCVNTSDPSKRAFSATVYGSDPDYGEGVKKGILFPPLL 567


>gi|307637700|gb|ADN80150.1| Methionyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 651

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT++ H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMVLQDTEPLF 506


>gi|261493681|ref|ZP_05990200.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494348|ref|ZP_05990842.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309997|gb|EEY11206.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310681|gb|EEY11865.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 692

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 240/542 (44%), Gaps = 46/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   A
Sbjct: 4   QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEVHFVCADDAHGTPIMLNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +++   +        +IS+D++  T  + +      ++K +   G I   
Sbjct: 64  DKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEENRQITTDIYKTLKANGFIKSK 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G + +   + ++P+  +           
Sbjct: 124 VISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VVKESEHFFFDLPSFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +IPD      YVW+DA   Y+ +     D       +FW  D      H IGKDI+ FH
Sbjct: 241 FEIPDAENKFFYVWLDAPIGYMASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 SLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQANTYLKHLDPECLRYYYAA 360

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D  ++ D   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++
Sbjct: 361 KLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLDDEAL 416

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
            +  +   + I    +N+  ++A+  ++ L  + ++Y D + PW + K          V 
Sbjct: 417 FNEFTAQAETIANFYENREFNKAIRAIMELTDKANKYIDDKAPWVIAKEEGKEAELQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +E+ R L   L+  +PKLA +    L        + ++   L  G  +   F  +F 
Sbjct: 477 SMGIELFRVLMSYLKPVLPKLAERAEAFLQ---SELRWDNIATPL-FGHTV-APFKSLFS 531

Query: 509 RF 510
           R 
Sbjct: 532 RL 533


>gi|161502696|ref|YP_001569808.1| methionyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864043|gb|ABX20666.1| hypothetical protein SARI_00743 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 696

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 25  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 84

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +     +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 85  LGITPEQMIGEMRHEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 144

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 145 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 204

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 205 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 261

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 262 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYFH 321

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 322 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 381

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 382 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 437

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 438 YKTFTDAAAAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 497

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        ++ + Q L  G  ++  F  ++ 
Sbjct: 498 SMGINLFRVLMTYLKPVLPTLSERVEAFLNCE---LSWEGIQQPLL-GHKINA-FKALYN 552

Query: 509 RF 510
           R 
Sbjct: 553 RI 554


>gi|324114469|gb|EGC08438.1| methionyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 677

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   +EI E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEEIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|161613158|ref|YP_001587123.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161362522|gb|ABX66290.1| hypothetical protein SPAB_00866 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|320086592|emb|CBY96363.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 704

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 153 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 212

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 213 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 269

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 270 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 329

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 330 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 389

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 390 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 445

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 446 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 505

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 506 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 560

Query: 509 RF 510
           R 
Sbjct: 561 RI 562


>gi|295136393|ref|YP_003587069.1| methionyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984408|gb|ADF54873.1| methionyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 695

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 145/558 (25%), Positives = 250/558 (44%), Gaps = 50/558 (8%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M    K Y I+ A+ Y N   HIGH     + AD+ +RF R+ G DV F  G+DEHG  I
Sbjct: 1   MSNTPKRYTITAALPYTNGPIHIGHLSGVYVPADIYSRFLRMQGHDVAFVCGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     +D  +   IS+D++ RT+ + HH T    +KK+ D G 
Sbjct: 61  TIKAKKEGVTPQDIVDKYDEIIKDSFNNFGISFDNYSRTSAEIHHKTASAFFKKLYDDGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------- 160
             +      Y    + +  D  V             G   +      N    +       
Sbjct: 121 FIEETTEQLYDAEAKQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAIT 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + +F  L  Y+  L  +     +         +V S++  GL+  +++R  
Sbjct: 181 GATPTLKETKHWFLPLDQYESWLKEWILEGHKSDWKPNVYGQVKSWIDDGLRARAVTRD- 239

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD
Sbjct: 240 LDWGIPVPVEGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDQDTKMVHFIGKD 299

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VD 323
            + FH I +P       +  LP+ V ++ F+  +G+K+S S    +   E +E+     D
Sbjct: 300 NIVFHCIIFPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEDFPGQQD 359

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L    GN ++R V +  K Y+G +PTP  +
Sbjct: 360 VLRYALTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGEVPTPAEY 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           ++ DE  ++        I  +++      A A++++L    ++Y   ++PW+L KT+ +R
Sbjct: 420 SKVDEETIAALKAYPAVIASSIEKYRFREAQAELMNLARLGNKYLADEEPWKLVKTDEER 479

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC--------FQSLDQR--- 492
             T++YV +++   LA L + F+P  +NK+ +IL  + E R         +  +  R   
Sbjct: 480 TKTIMYVALQIASALATLSEPFLPFTSNKLKEILKFSAEERNLNEGELSQWNKITTREAL 539

Query: 493 LKPGFMLHKTFDPIFPRF 510
           L  G ++ K  + +F + 
Sbjct: 540 LPSGHIIGKA-ELLFAKI 556


>gi|15612032|ref|NP_223684.1| methionyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7388283|sp|Q9ZKG9|SYM_HELPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4155547|gb|AAD06543.1| METHIONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 656

 Score =  359 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +V                  +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAVSKVDNTDSKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSTKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMVLQDTEPLF 506


>gi|315045362|ref|XP_003172056.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342442|gb|EFR01645.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 592

 Score =  359 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 186/539 (34%), Positives = 276/539 (51%), Gaps = 30/539 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           + +  Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 51  KSKPYYVTTPIFYVNAAPHIGHLYTILIADILKRWQVLIGNGDAKLLTGTDEHGMKIQQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  +   D+N   F+ +A   + S+D FIRTT+  H    +  W+ ++ +G IY+
Sbjct: 111 ALQNGLEPQALCDRNCETFKILAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYE 170

Query: 122 GCYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           G + GWYS+ DE +Y    V+       G            V++ +E  Y F+LSA+QD+
Sbjct: 171 GKHEGWYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDR 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P F+ P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+D
Sbjct: 231 LLEHYHKNPNFVRPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NY+T  GY   P   +   WPAD+ V+GKDI RFH IYWPAFL++ +LPLP+ + +H
Sbjct: 291 ALVNYITYAGYPFTPGREQESIWPADVQVVGKDITRFHCIYWPAFLMALDLPLPRTILTH 350

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                   K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     
Sbjct: 351 AHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNI 410

Query: 354 LANGIGNLVSRSV-------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           L  G+GNL SR +          +    G   +  A   S+        +V   +   M 
Sbjct: 411 LQGGLGNLCSRVMRGKGWNVRESVARMTGGQRSGNAKDPSEIEHKEFLEKVPALVSNQMD 470

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAI 460
                RAL +V+ ++ + +RY  +  PW L K   TNP   DR   V++   E +R   I
Sbjct: 471 ELNPRRALEEVVKIIDQTNRYVQSTGPWNLAKDAATNPIAHDRLVGVIFNATESLRIAGI 530

Query: 461 LLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKP--GFMLHKTFDP----IFPRFL 511
           LLQ F+P+ A K+ D+L V ++   R + +      P  G             +FP  L
Sbjct: 531 LLQPFMPEKAKKLLDMLGVEEDLSKRSYAAAKYGADPDYGTPRVPLGKGQAGTLFPPLL 589


>gi|157369816|ref|YP_001477805.1| methionyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|187647768|sp|A8GC37|SYM_SERP5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157321580|gb|ABV40677.1| methionyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 675

 Score =  359 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 134/538 (24%), Positives = 233/538 (43%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSNLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +   A ++P + ++ +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  +    +       L  +  N++  + +SGL+   +SR    +G +IPD
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPD 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSTTELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +++ 
Sbjct: 306 PAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K + G +        +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFGGQLADK----LADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               Q I E   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 VDAAQSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P L  +    L        + S+ Q L  G  ++  F  +F R 
Sbjct: 482 NLFRVLMTYLKPVMPSLTERTEAFLNCE---LSWDSIQQPLL-GHQVN-PFKALFNRI 534


>gi|332092688|gb|EGI97758.1| methionyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 677

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L I L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMIYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|15645045|ref|NP_207215.1| methionyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501030|sp|P56127|SYM_HELPY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2313521|gb|AAD07483.1| methionyl-tRNA synthetase (metS) [Helicobacter pylori 26695]
          Length = 650

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILP+ R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSTKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+ +     
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKLANAFNTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLF 506


>gi|197262435|ref|ZP_03162509.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197240690|gb|EDY23310.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 704

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 153 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 212

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 213 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 269

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 270 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 329

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 330 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 389

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 390 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ATELADPQL 445

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 446 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 505

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 506 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 560

Query: 509 RF 510
           R 
Sbjct: 561 RI 562


>gi|254361962|ref|ZP_04978093.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093509|gb|EDN74489.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 692

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 240/542 (44%), Gaps = 46/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   A
Sbjct: 4   QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEVHFVCADDAHGTPIMLNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +++   +        +IS+D++  T  + +      ++K +   G I   
Sbjct: 64  DKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEENRQITTDIYKTLKANGFIKSK 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G + +   + ++P+  +           
Sbjct: 124 VISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VVKESEHFFFDLPSFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +IPD      YVW+DA   Y+ +     D       +FW  D      H IGKDI+ FH
Sbjct: 241 FEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDFDEFWQKDSTTELYHFIGKDIVYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 SLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQANTYLKHLDPECLRYYYAA 360

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D  ++ D   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++
Sbjct: 361 KLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLDDEAL 416

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
            +  +   + I    +N+  ++A+  ++ L  + ++Y D + PW + K          V 
Sbjct: 417 FNEFTAQAETIANFYENREFNKAIRAIMELTDKANKYIDDKAPWVIAKEEGKEAELQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +E+ R L   L+  +PKLA +    L        + ++   L  G  +   F  +F 
Sbjct: 477 SMGIELFRVLMSYLKPVLPKLAERAEAFLQ---SELRWDNIATPL-FGHTV-APFKSLFS 531

Query: 509 RF 510
           R 
Sbjct: 532 RL 533


>gi|254779595|ref|YP_003057701.1| methionyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001507|emb|CAX29525.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Helicobacter pylori B38]
          Length = 650

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 193/507 (38%), Positives = 297/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLF 506


>gi|187649780|sp|A9MKV0|SYM_SALAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +     +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMRHEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        ++ + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLNCE---LSWEGIQQPLL-GHKINA-FKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|157144942|ref|YP_001452261.1| methionyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|187647714|sp|A8AEB2|SYM_CITK8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157082147|gb|ABV11825.1| hypothetical protein CKO_00671 [Citrobacter koseri ATCC BAA-895]
          Length = 677

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L N  G       +W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKFFYVWLDAPIGYMGSFKNLCNKRGDLTSFDDYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADMANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + ++ Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLNTE---LSWDAIAQPLL-GHKVNA-FKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|308183143|ref|YP_003927270.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065328|gb|ADO07220.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 653

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 193/510 (37%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKTHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAAKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPHNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|310794257|gb|EFQ29718.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 545

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 191/534 (35%), Positives = 292/534 (54%), Gaps = 27/534 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +  Y++T I Y NA PHIGH Y MI+ADVL R+  L G   +  TGTDEHG K+ +A
Sbjct: 6   KGDKPYYVTTPIFYVNASPHIGHMYSMILADVLKRWQVLKGRPAILCTGTDEHGSKVQQA 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV  K F D  +  FRD+A  + +  D FIRTT+  H +  +  W  +  KG IY+
Sbjct: 66  AARQGVEPKDFCDTTAEKFRDLARAIGMDNDHFIRTTDPDHKEAVQHFWHLLKGKGYIYE 125

Query: 122 GCYSGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWY + DE +Y  DE+        G          N V+W+EE+ Y FR++A +D+
Sbjct: 126 AKHQGWYCISDECFYAADEIERKVVPRTGRTAMVSIESGNEVEWIEEKTYHFRMTALKDR 185

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233
           LL +Y ++P++I+P  R NEVI++V + L+DLS+SR  +  DWG+++PDDP   +YVW+D
Sbjct: 186 LLEFYTANPDWIVPRARMNEVIAWVSNNLEDLSISRPVQRLDWGVRVPDDPSQTVYVWVD 245

Query: 234 ALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NYLT  G+    P       WPAD+HVIGKDI+RFH +YWPA L++ +LPLPK++ +
Sbjct: 246 ALINYLTKAGFPGWQPGREHEGGWPADVHVIGKDIVRFHGVYWPALLMALDLPLPKQLLT 305

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H       +K+SKSLGNV++P   I+  G+D +RYF++R+    KD  Y+   + +R   
Sbjct: 306 HAHWTLGRKKMSKSLGNVVNPFFAIDRWGLDTMRYFMMRDGGIEKDADYENSFILERYQK 365

Query: 353 DLANGIGNLVSRS-------VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           DL + +GN ++R        +   +          G      +++ +  + +   + E+M
Sbjct: 366 DLQSTLGNSMNRVAKSKVWKLRNSVAWVGQNGIFRGHAVNGSDALKASVNEMAATMSEHM 425

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAIL 461
                + A+  V+S+++EV++Y     PW L +    T+      ++Y   E +R   IL
Sbjct: 426 DQLNPNAAIRSVLSVLAEVNKYLTDTGPWNLYRSTKATDQAELHEIIYHASEAVRCAGIL 485

Query: 462 LQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHKTFDP-----IFP 508
           LQ  +P     + DIL V  + R F+       L  G  +     P     +FP
Sbjct: 486 LQPVMPAKMGTMLDILGVQVDKRGFEHAVFGADLTYGTPMIDPGRPGDWNSLFP 539


>gi|217032293|ref|ZP_03437790.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
 gi|298735963|ref|YP_003728488.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946059|gb|EEC24672.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
 gi|298355152|emb|CBI66024.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 650

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 193/507 (38%), Positives = 299/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +    +D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTSDKVLCPDCLRETALLEEESYFFKLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMAHFECTRHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+ +     
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKLANAFNTE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPDNYERFFKAKKLQDMILQDTEPLF 506


>gi|218559033|ref|YP_002391946.1| methionyl-tRNA synthetase [Escherichia coli S88]
 gi|30173163|sp|Q8FFX8|SYM_ECOL6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649787|sp|A1ACX8|SYM_ECOK1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649789|sp|Q1R9V8|SYM_ECOUT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695277|sp|B7MEG9|SYM_ECO45 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218365802|emb|CAR03542.1| methionyl-tRNA synthetase [Escherichia coli S88]
 gi|294491472|gb|ADE90228.1| methionyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307626341|gb|ADN70645.1| methionyl-tRNA synthetase [Escherichia coli UM146]
 gi|323951909|gb|EGB47783.1| methionyl-tRNA synthetase [Escherichia coli H252]
 gi|323956148|gb|EGB51900.1| methionyl-tRNA synthetase [Escherichia coli H263]
          Length = 677

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|87303680|ref|ZP_01086455.1| methionine--tRNA ligase [Synechococcus sp. WH 5701]
 gi|87281785|gb|EAQ73750.1| methionine--tRNA ligase [Synechococcus sp. WH 5701]
          Length = 529

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 191/527 (36%), Positives = 270/527 (51%), Gaps = 27/527 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G AY  +  D LARF RL G  V+F TG DEHG KI + A+ A
Sbjct: 2   TYTLTTPLYYVNDKPHLGSAYTTLACDALARFQRLMGRQVVFITGCDEHGLKIQRTAEAA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   DQ S  +RD+     ISYD FIRT+E RH       ++++   GD+ +G   
Sbjct: 62  GLTPQAHCDQVSDQYRDLWQRWQISYDRFIRTSEPRHRLLVEQFYRRVEAAGDVVEGRQR 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + +D    +       +    P++W +E   FFRLS YQ   +      P 
Sbjct: 122 GWYCVACEEFKDDPPEARAPQ---CSTHQRPLEWRDELNLFFRLSRYQQ-AIEELIQRPG 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  RR EV +FV  GL D S+SR    WGI +P    +  YVW DAL  YLT     
Sbjct: 178 FIAPASRRREVENFVAQGLHDFSISRLDLPWGIPVPGHEGHTFYVWFDALLGYLTALLEP 237

Query: 246 DNPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +P        + WPA +HVIGKDILRFHA+YWPA LLSA L LP++VF HGF+  +G+K
Sbjct: 238 GDPPDLALLSQRGWPASIHVIGKDILRFHAVYWPAMLLSAGLDLPERVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP E++E  G DA+R++L+R+I  G DG   +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPGELLERCGPDAVRWYLLRDIPFGDDGDVQQQRFSDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  + +D  +P P     S   +        +++ E M+     +A A  + L  
Sbjct: 358 NRTSSMARRWFDQAVPAPSEAVGSSHPLAQAALLAREQVIEGMERLDFRQAAAAALQLAI 417

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDIL--- 477
             + + + Q PW   K    R       Y  +E  RQ+A+LL   +P L+ ++   L   
Sbjct: 418 SANGFLNDQAPWSRMKQEGQRQQVADDLYAVLEAARQVALLLAPILPDLSARMLLQLNQP 477

Query: 478 ------------FVADENRCFQS--LDQRLKPGFMLHKTFDPIFPRF 510
                         A     +Q       L  G  L +  +P+  R 
Sbjct: 478 LAPSGVVAGGQSGPAGAQVPWQERLTWGSLAAGTPLPEP-EPVMARL 523


>gi|326798841|ref|YP_004316660.1| methionyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549605|gb|ADZ77990.1| Methionyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 688

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 140/542 (25%), Positives = 247/542 (45%), Gaps = 42/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK+ ++  I++A+ Y N   HIGH A   I AD+  RF R++  +V F  G+DEHG  I 
Sbjct: 1   MKDFKRYTITSALPYANGPLHIGHLAGAYIPADIFVRFLRMNNKEVAFVCGSDEHGAAIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+ +   ++  +   IS+D + RT+ K HH+  +  +  + DKG+ 
Sbjct: 61  IKAKKEGITPQQIIDKYNAQIKESFEQFGISFDIYHRTSSKIHHELSQEFFLNLYDKGEF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW--------- 159
            +     +Y      +  D  +             G   +      +P            
Sbjct: 121 VEKYSEQYYDEEYHQFLADRYIVGTCPNCHNEGAYGDQCEKCGTSLSPTDLINPKSTLSG 180

Query: 160 -----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  YQ  L  +     + IL      +  S++KSGL+  S++R   
Sbjct: 181 KTPVLRETKHWYLPLDKYQAWLEKWLLEGKKDILKSNVYGQCSSWLKSGLQARSMTRD-L 239

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD----LHV 262
           DWG+ +P +      +YVW+DA   Y++ T       G   + +      PAD    +H 
Sbjct: 240 DWGVDVPLEEAKGKKLYVWLDAPIGYISATKQWALDTGKDWEKYWKKQENPADDACLIHF 299

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P+ L       LP+ + ++ F+  +G+K+S S  + +   E + +  
Sbjct: 300 IGKDNIVFHCIIFPSILHAHGEYVLPENIPANEFLNLEGDKLSTSRNHAVWLHEYLADFP 359

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L   +    D  +     + RVN +L    GN ++R + +  K +DG +  
Sbjct: 360 GKQDELRYVLTSILPETSDSEFTWKDFQARVNNELVAIFGNFINRVLVLSHKYFDGKVKA 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G  ++ D+ +LS   R  + I  ++       ALA  +++    ++Y   ++PW+L KT
Sbjct: 420 AGELSDKDKLVLSELERYPKTISSSLSQYRFREALAHFMNVARLGNKYLADEEPWKLIKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + DR  TVL + +++   LA+L Q F+P  A K+F +L   D +         L+    L
Sbjct: 480 DEDRVKTVLNIGLQIAANLAVLAQPFLPHTAEKLFQMLNFQDRDWTAAGNPNLLENDHQL 539

Query: 500 HK 501
            +
Sbjct: 540 GE 541


>gi|262274495|ref|ZP_06052306.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221058|gb|EEY72372.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 678

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 126/540 (23%), Positives = 225/540 (41%), Gaps = 41/540 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ ++ A+ Y N   H+GH  E I ADV  R+ RL G  V F    D HG  I   A
Sbjct: 4   NQRKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  +    +         DIS+D++  T    + +    ++ ++ + G I   
Sbjct: 64  QQLGIEPEAMIADMQKEHEADFAGFDISFDNYHSTHSDENRELASYIYTQLKNNGYINSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
             S  +    E +  D            E   G +       ++P   +  +      + 
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTDLINPKSAVSGATP 183

Query: 172 YQDKLLSYYESHPEF-----------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
                + ++   P+F            L  E  N++  + +SGL+   +SR    +G +I
Sbjct: 184 VMKDSVHFFFDLPQFGDMLKAWTKSGALQEEMANKMNEWFESGLQQWDISRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           P +P    YVW+DA   Y+         N +    ++W  D      H IGKDI+ FH++
Sbjct: 244 PGEPGKYFYVWLDAPIGYMGSFKNFCNKNGNVDFDEYWKKDSDAELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE- 332
           +WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   + 
Sbjct: 304 FWPAMLEGAGFRKPTNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYYAAKL 363

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   +RVN+D+ N + NL SR+   I K +DGM+    A      ++  
Sbjct: 364 NNRIDDLDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFDGMLSAECAEP----ALYE 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             +   + I +  + +   RA+ ++++L  + ++Y D + PW + K          +  +
Sbjct: 420 EFAAAAERIGDLYEKREFSRAIREIMALADKANQYVDEKAPWVVAKEEGKDAELQAICTM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P+LA +    L    E   ++ +   L     +   F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVMPELAARSEAFLN---ETLTWEGIATPLTA-HKVEA-FKALFSRI 534


>gi|26248490|ref|NP_754530.1| methionyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91211401|ref|YP_541387.1| methionyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117624319|ref|YP_853232.1| methionyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|227887166|ref|ZP_04004971.1| methionyl-tRNA synthetase [Escherichia coli 83972]
 gi|237704573|ref|ZP_04535054.1| methionyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|300978881|ref|ZP_07174394.1| methionyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301048843|ref|ZP_07195839.1| methionyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|26108895|gb|AAN81098.1|AE016763_57 Methionyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072975|gb|ABE07856.1| methionyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115513443|gb|ABJ01518.1| methionyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|226900939|gb|EEH87198.1| methionyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227835516|gb|EEJ45982.1| methionyl-tRNA synthetase [Escherichia coli 83972]
 gi|300299357|gb|EFJ55742.1| methionyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300409514|gb|EFJ93052.1| methionyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307554183|gb|ADN46958.1| methionyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|315285705|gb|EFU45145.1| methionyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294365|gb|EFU53713.1| methionyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 680

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|254443440|ref|ZP_05056916.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257748|gb|EDY82056.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 512

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 178/513 (34%), Positives = 287/513 (55%), Gaps = 16/513 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI Y N  PH+GHAYE ++ DV+ARF RL G +V F TG DEHGQK+ ++A  
Sbjct: 2   KSFYITTAIDYANGSPHLGHAYEKVLTDVVARFRRLMGDEVYFLTGIDEHGQKVQQSAAK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      D+ +  F+++ + L+IS DDFIRTTE RH D  R + + + D+G+IYK  Y
Sbjct: 62  RGIEPIELCDEAAGQFQELCESLEISNDDFIRTTETRHKDVVRSILQDLFDRGEIYKAEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+YS R E +  + ++  G     +      V  + E  YFF+LS YQD L+ + ++H 
Sbjct: 122 KGFYSARAEQFLQEKDMVDGK----WPEIFGEVNEITESNYFFKLSKYQDWLVEHIKTHE 177

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +FI P  R  +V+ F+K  + DL +SR     +WGI +P D +Y+ YVW DAL NY++  
Sbjct: 178 DFIFPRFRAKQVLEFLKEPINDLCISRPKERLEWGIPLPFDEEYVTYVWFDALVNYISAI 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           GY         K+WP + HVIGKDI +  HA+YWP  L +  + +P  +  HG+    GE
Sbjct: 238 GYGTP---DFEKYWPVNYHVIGKDILVPPHAVYWPIMLKAIGIEIPSSLLVHGWWSINGE 294

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN I+P E ++E  VDALRYFL+RE++ G+D  +  +    R N+DLAN +GNL
Sbjct: 295 KMSKSTGNFIEPSEFVKEYSVDALRYFLIREMSVGQDSDFSDELFTNRYNSDLANDLGNL 354

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R ++M  +      P        +E + +  +   +++ E  +    H+ L    + +
Sbjct: 355 LNRVLTMTPRYCGETFPARTVSEGPEEELEAAWAETEKKVVELYEEFQFHKGLELTFNFI 414

Query: 422 SEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +++RY + + PW L K+    + +  +T L +  E +R+   LL+  +P    +++++L
Sbjct: 415 RQINRYAEQRSPWRLAKSEDPKDKEIVATSLSLMAEALRRAVGLLEPVMPATTTRVYELL 474

Query: 478 FVADENRCFQSLDQRLK-PGFMLHKTFDPIFPR 509
                    + +       G  + +    +FP+
Sbjct: 475 GYDGSASWLERIQASDALTGAKVGEKV-ILFPK 506


>gi|33303705|gb|AAP22260.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 411

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 188/411 (45%), Positives = 279/411 (67%), Gaps = 8/411 (1%)

Query: 21  HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNF 80
           HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   +T + +VD      
Sbjct: 1   HIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNITPQAYVDNIVAGI 60

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + +
Sbjct: 61  KELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQ 120

Query: 141 -VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            V    +G       +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+N
Sbjct: 121 LVDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEDNPHFIQPESRKN 180

Query: 195 EVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           E+I+   K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    
Sbjct: 181 EMINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTANEEKYK 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP
Sbjct: 241 KFWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K +
Sbjct: 301 VTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYF 360

Query: 374 DGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           +G IP      TE DE++++     L+++ E M+N     AL  +  LVS 
Sbjct: 361 NGEIPAFKENVTEFDETLVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSR 411


>gi|215487336|ref|YP_002329767.1| methionyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312968928|ref|ZP_07783135.1| methionyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|254782861|sp|B7UFD1|SYM_ECO27 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|215265408|emb|CAS09808.1| methionyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312286330|gb|EFR14243.1| methionyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|197294265|ref|YP_001798806.1| methionyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853592|emb|CAM11463.1| Methionyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 517

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 194/519 (37%), Positives = 298/519 (57%), Gaps = 19/519 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ + K Y+ST+IAY +  PHIG+ YE+I+AD +ARF RLDG DV F TGTDEHGQKI +
Sbjct: 1   MENKTKFYLSTSIAYASGIPHIGNVYEVILADAIARFKRLDGWDVFFQTGTDEHGQKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A + GV  + +V+  S   + + D++ ISYD FI+TT  +H    ++++ K+  +GDIY
Sbjct: 61  KASSKGVLPQEYVNYISSEIKRIYDLMQISYDRFIKTTNHKHQKAVQVIFTKLLQQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y G YS+ +E Y ++ ++  G               + E+ YFF+L+ YQ++LL Y 
Sbjct: 121 LGKYQGLYSVTEEVYVSEKDLVDGKTFNGEIPI-----LISEDTYFFKLAKYQNRLLDYL 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P  I P  ++ E+++ +K  L DLS+SR +F WGI +P D  +++YVWIDAL+NYLT
Sbjct: 176 ENNPNLIQPETQKKEILNLLKEPLNDLSISRTSFRWGIPVPCDKNHVIYVWIDALSNYLT 235

Query: 241 TTGYLDNPDGS--KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
              Y  N + S    ++WP +LHVIGKDILRFH IYWP  L++  + LP+K  +H +IL 
Sbjct: 236 GLDYNPNENTSSKFLQYWPCNLHVIGKDILRFHLIYWPILLMALKIELPQKFLAHPWILF 295

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+   ++++   +D +RYF++ EI    DG    + L +R N+ L N  
Sbjct: 296 DKNKMSKSKGNVLYVDDLLKFFPIDTIRYFVLHEIPYASDGNITYELLVERHNSVLVNLF 355

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVLQEIRENMQNQLIHRALAQ 416
           GN+V R   M+    +  +       E+ +   +      VL  +R+  +   +  AL +
Sbjct: 356 GNVVHRIFGMLKSYRNYQLTQILDLPENHQEFDLSQKVLLVLPLMRQKFEECKVGEALEE 415

Query: 417 VISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  L   +++Y D+ KPWEL +        + VLY   E +R L +LL+ F+P+ A KI 
Sbjct: 416 VEKLARLMNKYIDSVKPWELAQLPEKETLLNYVLYSLTEALRFLGVLLKPFLPQTAEKIL 475

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDP---IFPRF 510
               +  E+  F+SL      G +  K   P   +F R 
Sbjct: 476 CQ--IQAEDVTFESLKT---FGLLKTKKLMPDEMLFQRI 509


>gi|218690179|ref|YP_002398391.1| methionyl-tRNA synthetase [Escherichia coli ED1a]
 gi|331658191|ref|ZP_08359153.1| methionine--tRNA ligase [Escherichia coli TA206]
 gi|254782866|sp|B7MX36|SYM_ECO81 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218427743|emb|CAR08652.2| methionyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222033877|emb|CAP76618.1| Methionyl-tRNA synthetase [Escherichia coli LF82]
 gi|281179206|dbj|BAI55536.1| methionyl-tRNA synthetase [Escherichia coli SE15]
 gi|312946734|gb|ADR27561.1| methionyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315299519|gb|EFU58770.1| methionyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|330911946|gb|EGH40456.1| methionyl-tRNA synthetase [Escherichia coli AA86]
 gi|331056439|gb|EGI28448.1| methionine--tRNA ligase [Escherichia coli TA206]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|170767164|ref|ZP_02901617.1| methionyl tRNA synthetase [Escherichia albertii TW07627]
 gi|170123498|gb|EDS92429.1| methionyl tRNA synthetase [Escherichia albertii TW07627]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 241/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR    I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRCAGFINKRFDGVL----AGELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPNLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|168259509|ref|ZP_02681482.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205351288|gb|EDZ37919.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|16765484|ref|NP_461099.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167991077|ref|ZP_02572176.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|198241850|ref|YP_002216239.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|25009378|sp|Q8ZNN4|SYM_SALTY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710916|sp|B5FMX1|SYM_SALDC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16420690|gb|AAL21058.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197936366|gb|ACH73699.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205330481|gb|EDZ17245.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247369|emb|CBG25194.1| MetRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994216|gb|ACY89101.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158716|emb|CBW18228.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913145|dbj|BAJ37119.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321224806|gb|EFX49869.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|326623989|gb|EGE30334.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|320195981|gb|EFW70605.1| Methionyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|324006407|gb|EGB75626.1| methionyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|323187874|gb|EFZ73170.1| methionyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|261838373|gb|ACX98139.1| methionyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 653

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 195/510 (38%), Positives = 298/510 (58%), Gaps = 6/510 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+D  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNDLDNKMVHFACARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALTERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+       
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKLASAFHAE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                ++   +  K   M+ +  +P+F + 
Sbjct: 480 ITPHNYERFFKAKKLQDMILQDTEPLFSKI 509


>gi|194431555|ref|ZP_03063847.1| methionyl tRNA synthetase [Shigella dysenteriae 1012]
 gi|194420380|gb|EDX36457.1| methionyl tRNA synthetase [Shigella dysenteriae 1012]
 gi|332091488|gb|EGI96572.1| methionyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|315633887|ref|ZP_07889176.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393]
 gi|315477137|gb|EFU67880.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393]
          Length = 686

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 237/543 (43%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A
Sbjct: 4   SKRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +D             +IS+D++  T  + + +    ++ ++ + G I   
Sbjct: 64  DQMGITPEQLIDDVRHKHMADFAGFNISFDNYHSTHSEENREFSEFIYNRLKENGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------- 158
             S  Y      +  D  V             G + +   A ++P +             
Sbjct: 124 TISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELINPRSVVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRF 270
            +IP+      YVW+DA   Y+ +   L   +       FW  D      H IGKDI+ F
Sbjct: 241 FQIPNAEGKYFYVWLDAPIGYMASFKNLCKRETSIDFDSFWCKDSDAELYHFIGKDIMYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  +F HG++   GEK+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN DL N + NL SR+   I K +DG +    A    D++
Sbjct: 361 AKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AAALDDQA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + S      ++I    +N+   +A+ ++++L  + ++Y D + PW + K          V
Sbjct: 417 LFSEFIAQSEQIATYYENREFGKAIREIMALTDKANKYIDDKAPWVIAKEEGKDAELQAV 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + +++ R L   L+  +PKLA +    L        + +L Q L     +   F  +F
Sbjct: 477 CSMGIQLFRVLMGYLKPVLPKLAERAEAFLQAE---LTWANLAQPLLS-HQI-APFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 SRL 534


>gi|204929214|ref|ZP_03220357.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204321758|gb|EDZ06957.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|168242236|ref|ZP_02667168.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168466170|ref|ZP_02700040.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194442893|ref|YP_002041426.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448741|ref|YP_002046208.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197248289|ref|YP_002147126.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|226710915|sp|B5EXZ5|SYM_SALA4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710919|sp|B4T9X0|SYM_SALHS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710920|sp|B4SXY7|SYM_SALNS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194401556|gb|ACF61778.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194407045|gb|ACF67264.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195631196|gb|EDX49756.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197211992|gb|ACH49389.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205338339|gb|EDZ25103.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 677

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|126326777|ref|XP_001379390.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Monodelphis
           domestica]
          Length = 605

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 191/549 (34%), Positives = 285/549 (51%), Gaps = 57/549 (10%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD----------VLFTTGTDEHGQKIA 59
           +T I Y NA PHIGH Y  ++AD LAR+ RL              V F+TGTDEHG KI 
Sbjct: 53  TTPIFYVNAAPHIGHLYSALLADALARYCRLRAAAPPVTSPAAPLVRFSTGTDEHGLKIQ 112

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +AA  AG+T     D+ S  FR +     IS  DF+RTTE RH       W+ +  +G +
Sbjct: 113 QAATAAGLTPSELCDRVSAQFRALFQEAGISITDFLRTTEARHRRAVHHFWEVLHARGLL 172

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           YKG Y GWY   +E +  D +V       G          +PV WM+EE Y FRLS +++
Sbjct: 173 YKGLYEGWYCASEECFLPDGKVTWRPGPNGQSHPVALDSGHPVCWMKEENYIFRLSQFRE 232

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
            L  + +  P+ I P   R+ V+ +++  L DLS+SR      WG+ +P DP   +YVW+
Sbjct: 233 PLRQWLQDDPQAITPDPFRSTVLKWLEEDLPDLSVSRSNSHLYWGLPVPGDPTQTIYVWV 292

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY D+    +  +WPA  H+IGKDIL+FHAIYWPA LL A +  P +++ 
Sbjct: 293 DALVNYLTVIGYPDS---EQEAWWPATHHIIGKDILKFHAIYWPALLLGAGMTPPHRIYV 349

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H      G+K+SKSLGNV+DP+  +++  VD  RYFL+R+     D  Y +  + K ++A
Sbjct: 350 HSHWTVHGQKMSKSLGNVVDPLSCLDQFTVDGFRYFLLRQGVPNWDCDYYEKKVVKLLDA 409

Query: 353 DLANGIGNLVSRSVSMILK--------------DYDGMIPTPGAFTESDESILSVCSRVL 398
           +LA+ +G L++R  +  L                 + ++  P      D +++   S + 
Sbjct: 410 ELADALGGLLNRCTATSLNPTGIFPVFSTSCFPSMEDIMAAPTKAQPEDYALVKAVSALP 469

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVI 455
            ++    +N  I++AL  V + V + + +     PW+L + N   A    TVL+VT+E +
Sbjct: 470 LQVENYYENFQIYKALEAVSTCVRQTNGFVQRNAPWKLNRENLADAQWLDTVLHVTLECL 529

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHK 501
           R   +LLQ   P LA+K+   L +++  R  Q++               +RL P   L  
Sbjct: 530 RVFGLLLQPVTPALADKLLSRLGISETERGLQNIYFLPRYYGQPCPFEGRRLGPDTGL-- 587

Query: 502 TFDPIFPRF 510
               +FPR 
Sbjct: 588 ----LFPRL 592


>gi|331647762|ref|ZP_08348854.1| methionine--tRNA ligase [Escherichia coli M605]
 gi|331043486|gb|EGI15624.1| methionine--tRNA ligase [Escherichia coli M605]
          Length = 680

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|317014423|gb|ADU81859.1| methionyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 650

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLDFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +   V+ Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANVLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +      M+ +  +P+F
Sbjct: 480 ITPNNYERFFKTKNLQDMILQDTEPLF 506


>gi|258614579|ref|ZP_05712349.1| methionyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 413

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 184/413 (44%), Positives = 271/413 (65%), Gaps = 8/413 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+E  YI+T I YP+ + HIG++Y  I  D +AR+ RL G DV + TG DEHGQKI  
Sbjct: 1   MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV  + +VD+ + + + +   LDISYD FIRTT+  H    + ++ ++ ++GDIY
Sbjct: 61  KAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYFFRLSAYQD 174
            G Y GWYS+ DE ++ +    EVYK  +G     +    + V+ ++EE YFFR+S Y D
Sbjct: 121 LGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD 180

Query: 175 KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +LL YYE HPEFI P  R+NE+I+   K GL+DL++SR TF WG+ +  DP++++YVWID
Sbjct: 181 RLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWID 240

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL+NY+T  GY    +    K+WPAD+ ++GK+I+RFH IYWP  L++ +LPLPKKVF H
Sbjct: 241 ALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R +  G DG +  +    RVN D
Sbjct: 301 GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENM 405
           LAN +GNL++R+++MI K  DG++P   +  T  D  + +  + V+    + M
Sbjct: 361 LANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAM 413


>gi|30063551|ref|NP_837722.1| methionyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56480038|ref|NP_708001.2| methionyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110806076|ref|YP_689596.1| methionyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|71153570|sp|Q83KH0|SYM_SHIFL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123048090|sp|Q0T324|SYM_SHIF8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30041804|gb|AAP17531.1| methionine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383589|gb|AAN43708.2| methionine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110615624|gb|ABF04291.1| methionine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|281601555|gb|ADA74539.1| Methionyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313649839|gb|EFS14259.1| methionyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|324013836|gb|EGB83055.1| methionyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 676

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|168818140|ref|ZP_02830140.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|200387153|ref|ZP_03213765.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|187649781|sp|A9N7I2|SYM_SALPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|199604251|gb|EDZ02796.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205345163|gb|EDZ31927.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|56412932|ref|YP_150007.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361863|ref|YP_002141499.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|68565964|sp|Q5PJ43|SYM_SALPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710921|sp|B5BE81|SYM_SALPK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56127189|gb|AAV76695.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093339|emb|CAR58787.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|191169956|ref|ZP_03031510.1| methionyl tRNA synthetase [Escherichia coli F11]
 gi|187649788|sp|Q0TFX8|SYM_ECOL5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|190909472|gb|EDV69057.1| methionyl tRNA synthetase [Escherichia coli F11]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|322615182|gb|EFY12104.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617773|gb|EFY14669.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624633|gb|EFY21464.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626916|gb|EFY23712.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634102|gb|EFY30838.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635707|gb|EFY32417.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640158|gb|EFY36822.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646419|gb|EFY42931.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649387|gb|EFY45823.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322656507|gb|EFY52796.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661483|gb|EFY57707.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665629|gb|EFY61813.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667153|gb|EFY63320.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671159|gb|EFY67287.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675200|gb|EFY71277.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680809|gb|EFY76844.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686984|gb|EFY82961.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192748|gb|EFZ77975.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198820|gb|EFZ83919.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323205170|gb|EFZ90148.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208213|gb|EFZ93157.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210977|gb|EFZ95838.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215762|gb|EGA00505.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220692|gb|EGA05138.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224686|gb|EGA08958.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231207|gb|EGA15322.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233642|gb|EGA17734.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237712|gb|EGA21772.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245695|gb|EGA29689.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248941|gb|EGA32865.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252988|gb|EGA36821.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258664|gb|EGA42326.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259496|gb|EGA43131.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268279|gb|EGA51754.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271931|gb|EGA55347.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|194436183|ref|ZP_03068285.1| methionyl tRNA synthetase [Escherichia coli 101-1]
 gi|253772958|ref|YP_003035789.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162129|ref|YP_003045237.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300930934|ref|ZP_07146296.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|194424911|gb|EDX40896.1| methionyl tRNA synthetase [Escherichia coli 101-1]
 gi|242377757|emb|CAQ32519.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324002|gb|ACT28604.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974030|gb|ACT39701.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978198|gb|ACT43868.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300461223|gb|EFK24716.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|323961710|gb|EGB57314.1| methionyl-tRNA synthetase [Escherichia coli H489]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L  A     +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTA---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|323934275|gb|EGB30697.1| methionyl-tRNA synthetase [Escherichia coli E1520]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|260598586|ref|YP_003211157.1| methionyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217763|emb|CBA32193.1| Methionyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 712

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 41  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    +     +++ ++ + G I     
Sbjct: 101 LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 160

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 161 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 220

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 221 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 277

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 278 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTQSFEEYWKKDSATELYHFIGKDIVYFH 337

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 338 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYAA 397

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++
Sbjct: 398 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPAL 453

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 454 YKTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 513

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+L  +    L V      +  ++  L  G  ++ +F  ++ 
Sbjct: 514 SMGINLFRVLMTYLKPVLPELCARAEAFLNVE---LTWDGVNAPLL-GHKVN-SFKALYN 568

Query: 509 RF 510
           R 
Sbjct: 569 RI 570


>gi|110642322|ref|YP_670052.1| methionyl-tRNA synthetase [Escherichia coli 536]
 gi|300981629|ref|ZP_07175615.1| methionyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|110343914|gb|ABG70151.1| methionyl-tRNA synthetase [Escherichia coli 536]
 gi|300307430|gb|EFJ61950.1| methionyl-tRNA synthetase [Escherichia coli MS 200-1]
          Length = 680

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      K+W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|283785919|ref|YP_003365784.1| Methionyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949373|emb|CBG88984.1| Methionyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 246/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             VT +  + + S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  LSVTPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRELSALIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTASFDEYWKKDSSAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L  + +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAATVIGEAWESREFGKAIREIMALADQANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + ++ Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLNAE---LRWDAIAQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|330829598|ref|YP_004392550.1| methionyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328804734|gb|AEB49933.1| Methionyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 692

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 129/542 (23%), Positives = 225/542 (41%), Gaps = 42/542 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   
Sbjct: 18  TDPRKMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFICADDAHGTPIMLK 77

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S+  +      +IS+D++  T    + +   +++ ++ + G I  
Sbjct: 78  AQQMGITPEEMIAAVSKEHQADFAGFNISFDNYHSTHSDENRELAELIYGRLKNGGFIKS 137

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------- 163
              S  +      +  D  V             G +     A ++P + ++ +       
Sbjct: 138 RTISQLFDPEKSMFLPDRFVKGTCPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGAT 197

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                   F     Q +            +  E  N++  + +SGL+   ++R    +G 
Sbjct: 198 PVMKDSEHFFFDLPQFEKWLSEWVRGSGAIQEEMANKMQEWFESGLQQWDITRDAPYFGF 257

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+ +   L N         +W AD      H IGKDI  FH
Sbjct: 258 EIPGAPGKYFYVWLDAPIGYMASFKNLCNKRGDIDFDSYWKADSDAELYHFIGKDIAYFH 317

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WP+ L  AN   P KV  HG++   G K+SKS G  I     +  +  + LRY+   
Sbjct: 318 CLFWPSMLEGANFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAA 377

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  +   D   + +   +RVNAD+ N + NL SR+   I K + G +    A T ++  +
Sbjct: 378 KLNSRIDDLDLNLEDFVQRVNADVVNKLVNLASRNAGFIAKRFGGKL----AATCAEPEL 433

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
            +  +     I E  +++   RA+ ++++L  + +RY D + PW + K          V 
Sbjct: 434 YAEFANARTAIAEAYESREFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVC 493

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V + + R L   L+  +P LA +    L    E   +  ++  L         F  +F 
Sbjct: 494 SVGINLFRVLMAYLKPVMPLLAERAEAFL---AETLSWDGIEMPLVDHT--VAPFKALFS 548

Query: 509 RF 510
           R 
Sbjct: 549 RI 550


>gi|320178044|gb|EFW53025.1| Methionyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 677

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAETFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|330433077|gb|AEC18136.1| methionyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 680

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 132/544 (24%), Positives = 241/544 (44%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I  
Sbjct: 1   MSSRRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++ +  +    +         +ISYD++  T    + +    ++ K+   G I 
Sbjct: 61  KADQMGISPEQLIADVQQQHISSFSGFNISYDNYYSTHSPENQELSCAIYTKLKQNGFIK 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------- 160
               S  Y      +  D            E   G + +  +A ++P + +         
Sbjct: 121 SKTISQLYDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVVSGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L +++  L  + +S     L  E  N+++ + +SGL+   +SR    
Sbjct: 181 TPVLKESEHFFFDLPSFESMLKDWIKSGS---LQAEVSNKMMEWFESGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP+ P    YVW+DA   Y+ +        +     FW  +      H IGKDI+ 
Sbjct: 238 FGFEIPNQPGKYFYVWLDAPIGYMASFKNLCSRKNIDFDHFWQQNSNTELYHFIGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  +F HG++   GEK+SKS G  I     +E +  + LRY+ 
Sbjct: 298 FHSLFWPAMLEGAGYRKPNNIFVHGYVTVNGEKMSKSRGTFIQAKTYLEHLDPECLRYYY 357

Query: 330 VREIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+D+ N + NL SR+   I K + G +    A    D+
Sbjct: 358 AAKLSGRIDDLDLNLEDFVQRVNSDIVNKLVNLASRNAGFIQKRFGGKL----ADRLHDQ 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++    S+  ++I ++ +N+  ++A+ ++++L  + ++Y D   PW + K          
Sbjct: 414 ALWQEFSQQAEQIAQHYENREYNKAIREIMNLCDKANKYVDETAPWVIAKDENRQQELHE 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + +++ R L   L+  +P LA +    L    +   +++L   L         F  +
Sbjct: 474 VCSMGIQMFRMLMGYLKPVLPTLAERAEAFL---HDELRWETLTSPLLA--HEIAPFKAL 528

Query: 507 FPRF 510
           F R 
Sbjct: 529 FSRL 532


>gi|323972901|gb|EGB68099.1| methionyl-tRNA synthetase [Escherichia coli TA007]
          Length = 680

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L  A     +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTA---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|220980038|emb|CAP72230.1| Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase)
           (MetRS) [Escherichia coli LF82]
          Length = 677

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|293415399|ref|ZP_06658042.1| methionyl-tRNA synthetase [Escherichia coli B185]
 gi|291433047|gb|EFF06026.1| methionyl-tRNA synthetase [Escherichia coli B185]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|15802593|ref|NP_288620.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15832174|ref|NP_310947.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168750112|ref|ZP_02775134.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168756378|ref|ZP_02781385.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168761860|ref|ZP_02786867.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168770093|ref|ZP_02795100.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168775929|ref|ZP_02800936.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783890|ref|ZP_02808897.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789082|ref|ZP_02814089.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195937886|ref|ZP_03083268.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208806897|ref|ZP_03249234.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208814010|ref|ZP_03255339.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208820874|ref|ZP_03261194.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397521|ref|YP_002271396.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217329495|ref|ZP_03445574.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254793941|ref|YP_003078778.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261224994|ref|ZP_05939275.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257658|ref|ZP_05950191.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283362|ref|YP_003500180.1| Methionyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|25009369|sp|Q8X7E7|SYM_ECO57 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710903|sp|B5YV64|SYM_ECO5E RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12516327|gb|AAG57175.1|AE005437_10 methionine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13362389|dbj|BAB36343.1| methionine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768610|gb|EDU32454.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188015612|gb|EDU53734.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188998822|gb|EDU67808.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356515|gb|EDU74934.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360933|gb|EDU79352.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189367747|gb|EDU86163.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189371227|gb|EDU89643.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208726698|gb|EDZ76299.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208735287|gb|EDZ83974.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208740997|gb|EDZ88679.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158921|gb|ACI36354.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209747798|gb|ACI72206.1| methionine tRNA synthetase [Escherichia coli]
 gi|209747800|gb|ACI72207.1| methionine tRNA synthetase [Escherichia coli]
 gi|209747802|gb|ACI72208.1| methionine tRNA synthetase [Escherichia coli]
 gi|217317263|gb|EEC25692.1| methionyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|226237469|dbj|BAH46991.1| methionyl-tRNA synthetase [Escherichia coli O55:H7]
 gi|254593341|gb|ACT72702.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290763235|gb|ADD57196.1| Methionyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320191722|gb|EFW66370.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320641295|gb|EFX10768.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320646659|gb|EFX15563.1| methionyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651946|gb|EFX20314.1| methionyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657546|gb|EFX25344.1| methionyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663153|gb|EFX30462.1| methionyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668028|gb|EFX34924.1| methionyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338468|gb|EGD62296.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326347009|gb|EGD70742.1| Methionyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|238912598|ref|ZP_04656435.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ATELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|327253241|gb|EGE64895.1| methionyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|168229505|ref|ZP_02654563.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194472636|ref|ZP_03078620.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194459000|gb|EDX47839.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205335754|gb|EDZ22518.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 248/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ATELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADIANRYVDEQAPWVVAKQEDRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|145346883|ref|XP_001417911.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578139|gb|ABO96204.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 591

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 180/516 (34%), Positives = 287/516 (55%), Gaps = 18/516 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I Y N QPHIGH Y   +AD  AR+ R  G DV F TGTDEHG K+ ++A+  G+
Sbjct: 67  FVTTPIYYVNDQPHIGHVYTSTVADAYARYRRARGEDVFFLTGTDEHGLKVEQSAEKRGI 126

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             +   D+NS+ FRD+    DIS+D+FIRTT+  H    R L K + +K  +Y G + GW
Sbjct: 127 EPQALADENSQKFRDVMTAYDISFDEFIRTTDDYHERQVRALVKVLQEKDAVYLGRFEGW 186

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E YY + +  K  D +   +  + V+   EE Y+FRLS +Q +L + +  +P+F+
Sbjct: 187 YDEGQEEYYTESK-AKELDYKSPISGKDMVR-SSEENYYFRLSKFQKELEALHADNPDFL 244

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT----TTG 243
            P  RRNE+I  +  GL D+ +SR  F WGI +PDD ++++YVWIDAL NY+T      G
Sbjct: 245 TPSARRNEMIGRLNEGLNDVPISRTNFKWGIPMPDDEKHVIYVWIDALMNYITAIGLGDG 304

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                   ++K+WPA +H++ K+I  FH++ WPA L++ +LPLP++V +H F + +G K+
Sbjct: 305 KDSIVYADRSKYWPASMHIMAKEISWFHSVIWPALLMALDLPLPQRVHAHAFWIREGRKM 364

Query: 304 SKSLGNVID---PIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIG 359
           SKSLGN +D        E  G+DA+RY+L  E     +D  +  + +++  ++DL N +G
Sbjct: 365 SKSLGNFVDLACMDRFKEHYGLDAMRYYLAVEGPIGAQDANFSAERVQEIYSSDLVNTMG 424

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTE---SDESIL-SVCSRVLQEIRENMQNQLIHRALA 415
           N VSR+ +MI K +DG + +  A       D     +  S  +Q+         + RA A
Sbjct: 425 NSVSRTTAMINKYFDGEVRSEEANGARVTFDNWDWPARTSAHVQDALTAYDKLDLPRAAA 484

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++V +VD +    +P+ + K        +  LY  +E +R  A+LL+  +P    + 
Sbjct: 485 AAKNIVMDVDLFITETEPFRMAKDESKSAELAACLYQCLEALRIAAVLLEPLMPNKMAEF 544

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
              + + + +   ++    LKPG  + K    +FPR
Sbjct: 545 DAGVGLGEGSIAQRTKWGGLKPGTKVEKL--ALFPR 578


>gi|227538486|ref|ZP_03968535.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241672|gb|EEI91687.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 689

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 256/542 (47%), Gaps = 42/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++++  I++A+ Y N   HIGH A   I  D+  R+ RL+  DV++  G+DEHG  I 
Sbjct: 3   ITDKKRYTITSALPYANGPLHIGHLAGAYIPGDIFVRYLRLNQKDVVYVCGSDEHGAAIT 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+ ++  ++  +   IS+D + RT+E  HH   +  +  +  KG+ 
Sbjct: 63  IKAKKEGITPREIIDKYNQQIKESFEEFGISFDIYHRTSEPIHHQLSQEFFLNLYHKGEF 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +     +Y      +  D  +             G   +      +P   +        
Sbjct: 123 IERFSEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKCGTSLSPTDLINPISTLSG 182

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  YQ  L  +     +  L      + +S++KSGL+  S++R   
Sbjct: 183 KTPVLKETKHWYLPLDKYQPWLEKWLIEGKKDELKSNVYGQCLSWLKSGLQPRSMTRD-L 241

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD----LHV 262
           DWG+ +P +      +YVW+DA   Y++ T      +G   + +      P D    +H 
Sbjct: 242 DWGVDVPLEEAEGKKLYVWLDAPIGYISATKQWALDNGKNWEDYWKEQPDPEDNSCLIHF 301

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +PA L    +  LP+ + ++ F+  +G+K+S S  + +   E +EE  
Sbjct: 302 IGKDNIVFHCIIFPAILHAHGDYILPENIPANEFLNLEGDKLSTSRNHAVWLHEYLEEFP 361

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L   +    D  +     + R+N +L   +GN ++R + +  K +DG I +
Sbjct: 362 GKQDELRYVLTSILPETSDSEFTWKDFQARINNELVAILGNFINRVMVLSHKYFDGKILS 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                E D+ + +   +  ++I +++       ALAQ +++    ++Y    +PW++ KT
Sbjct: 422 GSDLQEEDQQVFAELKKYPEQITQSINQYRFREALAQFMNVARLGNKYLADAEPWKVIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + +R  TVL V++++   LAIL Q F+PK A K+F++L +  ++      +  LK G  L
Sbjct: 482 DEERVKTVLNVSLQIAANLAILAQPFLPKTATKLFEMLNLPQQDWKGAGQEDLLKDGHEL 541

Query: 500 HK 501
            +
Sbjct: 542 GE 543


>gi|74312632|ref|YP_311051.1| methionyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|123745978|sp|Q3Z096|SYM_SHISS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|73856109|gb|AAZ88816.1| methionine tRNA synthetase [Shigella sonnei Ss046]
 gi|323168762|gb|EFZ54442.1| methionyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +         ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|86739206|ref|YP_479606.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566068|gb|ABD09877.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 521

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 186/517 (35%), Positives = 272/517 (52%), Gaps = 32/517 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++TAI Y N +PH+GHA E+I  D  AR  R  G +V F TGTD++  K  +AA+  
Sbjct: 15  RYFVTTAIPYVNGKPHVGHALELIETDAYARHLRQRGHEVRFQTGTDDNALKNVQAAEAE 74

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T   +V++ +  F  +   L +S+DDFI+T T+ RH      LW   +D+GD Y+  Y
Sbjct: 75  GITPAEYVERVATGFVGLRGPLGLSFDDFIKTSTDPRHRPGVEKLWSACADRGDFYRKTY 134

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G Y +  E +Y  DE+  G               +EE  +FFRL  YQD+L +   +  
Sbjct: 135 AGLYCVGCELFYQPDELVDG----RCPEHGTVPDLVEESNWFFRLGRYQDQLHALISTDR 190

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             I P  R+ EV+SF+++GL+D S SR   +   WGI +P DP+ ++YVW DAL NY+T 
Sbjct: 191 LRIEPAARKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPEQVIYVWFDALGNYITA 250

Query: 242 TGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            GY ++ D  +  +  AD  +HVIGK I+RFHA+YWPA LLSA + LP  +F H ++   
Sbjct: 251 PGYGNDDDSFQYWWNDADRRVHVIGKGIIRFHAVYWPAMLLSAGVRLPDTIFVHEYLTAD 310

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             KISKS GN  DP +++     DALR++++R++A   D  Y  + L  R N DLAN IG
Sbjct: 311 SMKISKSAGNAEDPADIVAAFNTDALRWWMLRDVARAGDTDYTTERLVTRANEDLANNIG 370

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R+VSM+ +  DG+IP       +   + +V     + I +        RA   +  
Sbjct: 371 NLVNRTVSMVKRYRDGLIPPLALDNPAAAKLRAVRDETPRTIDDAFAAFDFRRAAEVITR 430

Query: 420 LVSEVDRYFDAQKPWELKKTN------PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +  E +RY +A +PWEL K         D    VL   V   R+LA  L  F+P  A +I
Sbjct: 431 IGDEGNRYVEAARPWELAKAERKEGASRDALDAVLAELVATCRELAEHLAPFLPDSAPRI 490

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                                 G        P+FPR 
Sbjct: 491 AAQCG----------------DGGSRVAGPSPVFPRL 511


>gi|157157217|ref|YP_001463462.1| methionyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170681859|ref|YP_001743009.1| methionyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|191165345|ref|ZP_03027187.1| methionyl tRNA synthetase [Escherichia coli B7A]
 gi|193062824|ref|ZP_03043917.1| methionyl tRNA synthetase [Escherichia coli E22]
 gi|193069312|ref|ZP_03050268.1| methionyl tRNA synthetase [Escherichia coli E110019]
 gi|194428871|ref|ZP_03061405.1| methionyl tRNA synthetase [Escherichia coli B171]
 gi|209919574|ref|YP_002293658.1| methionyl-tRNA synthetase [Escherichia coli SE11]
 gi|218554679|ref|YP_002387592.1| methionyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218695732|ref|YP_002403399.1| methionyl-tRNA synthetase [Escherichia coli 55989]
 gi|218699295|ref|YP_002406924.1| methionyl-tRNA synthetase [Escherichia coli IAI39]
 gi|256017717|ref|ZP_05431582.1| methionyl-tRNA synthetase [Shigella sp. D9]
 gi|260844721|ref|YP_003222499.1| methionyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260856089|ref|YP_003229980.1| methionyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868819|ref|YP_003235221.1| methionyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293446466|ref|ZP_06662888.1| methionyl-tRNA synthetase [Escherichia coli B088]
 gi|300902240|ref|ZP_07120238.1| methionyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300917049|ref|ZP_07133742.1| methionyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300924516|ref|ZP_07140483.1| methionyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|306814769|ref|ZP_07448931.1| methionyl-tRNA synthetase [Escherichia coli NC101]
 gi|307314906|ref|ZP_07594496.1| methionyl-tRNA synthetase [Escherichia coli W]
 gi|331668809|ref|ZP_08369657.1| methionine--tRNA ligase [Escherichia coli TA271]
 gi|187647719|sp|A7ZNT3|SYM_ECO24 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695278|sp|B7NPL8|SYM_ECO7I RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695279|sp|B7M4V9|SYM_ECO8A RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695281|sp|B1LN54|SYM_ECOSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710905|sp|B6HYV5|SYM_ECOSE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782865|sp|B7L9Y6|SYM_ECO55 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157079247|gb|ABV18955.1| methionyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170519577|gb|ACB17755.1| methionyl tRNA synthetase [Escherichia coli SMS-3-5]
 gi|190904508|gb|EDV64215.1| methionyl tRNA synthetase [Escherichia coli B7A]
 gi|192931467|gb|EDV84068.1| methionyl tRNA synthetase [Escherichia coli E22]
 gi|192957445|gb|EDV87892.1| methionyl tRNA synthetase [Escherichia coli E110019]
 gi|194413039|gb|EDX29327.1| methionyl tRNA synthetase [Escherichia coli B171]
 gi|209912833|dbj|BAG77907.1| methionyl-tRNA synthase [Escherichia coli SE11]
 gi|218352464|emb|CAU98240.1| methionyl-tRNA synthetase [Escherichia coli 55989]
 gi|218361447|emb|CAQ99034.1| methionyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218369281|emb|CAR17039.1| methionyl-tRNA synthetase [Escherichia coli IAI39]
 gi|257754738|dbj|BAI26240.1| methionyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759868|dbj|BAI31365.1| methionyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257765175|dbj|BAI36670.1| methionyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291323296|gb|EFE62724.1| methionyl-tRNA synthetase [Escherichia coli B088]
 gi|300405645|gb|EFJ89183.1| methionyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300415685|gb|EFJ98995.1| methionyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300419282|gb|EFK02593.1| methionyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|305852163|gb|EFM52615.1| methionyl-tRNA synthetase [Escherichia coli NC101]
 gi|306905612|gb|EFN36142.1| methionyl-tRNA synthetase [Escherichia coli W]
 gi|315061427|gb|ADT75754.1| methionyl-tRNA synthetase [Escherichia coli W]
 gi|315255375|gb|EFU35343.1| methionyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320199178|gb|EFW73771.1| Methionyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323152334|gb|EFZ38623.1| methionyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323161833|gb|EFZ47712.1| methionyl-tRNA synthetase [Escherichia coli E128010]
 gi|323172706|gb|EFZ58340.1| methionyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323176992|gb|EFZ62582.1| methionyl-tRNA synthetase [Escherichia coli 1180]
 gi|323183730|gb|EFZ69122.1| methionyl-tRNA synthetase [Escherichia coli 1357]
 gi|323377994|gb|ADX50262.1| methionyl-tRNA synthetase [Escherichia coli KO11]
 gi|323944929|gb|EGB40994.1| methionyl-tRNA synthetase [Escherichia coli H120]
 gi|324015992|gb|EGB85211.1| methionyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118043|gb|EGC11942.1| methionyl-tRNA synthetase [Escherichia coli E1167]
 gi|331064003|gb|EGI35914.1| methionine--tRNA ligase [Escherichia coli TA271]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|322378728|ref|ZP_08053158.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380011|ref|ZP_08054276.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147563|gb|EFX42198.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148846|gb|EFX43316.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 632

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 188/515 (36%), Positives = 295/515 (57%), Gaps = 21/515 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+  +   IST I Y N +PH+GHAY   IAD+L +++ L G +V   TGTDEHGQKIA+
Sbjct: 17  MQNFK--LISTPIYYVNDKPHLGHAYTTFIADMLKKYYSLQGEEVFLLTGTDEHGQKIAQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A    ++   +    SR F++  D   I Y+ F+RTT+ +H +  +  ++K+  KGDIY
Sbjct: 75  SALKHNLSPLEYASNVSRLFKNQWDYFKIDYNHFVRTTDSQHKEAVQKAFEKMYQKGDIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G Y +  E++             +    +     +EEE YFF+LS YQD+LL +Y
Sbjct: 135 KGMYQGSYCVSCESFVTTT---------HCPDCNRESTLVEEESYFFKLSNYQDRLLDFY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTN 237
            +HP+ I P+ RRNEV+ F++ GL DLS++R +F+WGI +P    + ++++YVW+DAL N
Sbjct: 186 HTHPKAIYPLFRRNEVLRFIEQGLYDLSITRTSFEWGIALPSSLKESKHVVYVWLDALLN 245

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           Y++  GY     G+  + +   +HV+GKDILRFHAIYW AFL+S  LPL +++  HG+  
Sbjct: 246 YVSALGY---GKGANLECFKHTIHVVGKDILRFHAIYWVAFLMSLELPLFERLCVHGWWT 302

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGNV+D  ++ +  G + LRYFL+RE+  G+DG +    L +R NADL+N 
Sbjct: 303 IDGVKMSKSLGNVLDAQDLAKTYGTETLRYFLLREVPLGQDGDFSLQALIRRSNADLSNT 362

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNLV R + M  + + G + + G  T     +      +L  + ++MQ    HR L  +
Sbjct: 363 LGNLVQRVLGMASQYFGGKLESEGVLTHY-AFLYQQLQDLLNSLDQSMQEMQPHRYLEDL 421

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +    +     ++PW + KT P +   +L +   ++ +    L   +P+ A K+  I 
Sbjct: 422 WKIFEVCNATIAQEQPWNMVKTQPKKTMALLSLIATILAKSTFYLYPVMPESATKLAAIF 481

Query: 478 FVADENRCFQSLDQ--RLKPGFMLHKTFDPIFPRF 510
            V   ++ F +  Q   L P   LHK  + +FP+ 
Sbjct: 482 GVNLNSQNFLTFKQSHYLLPPLTLHK-IEALFPKI 515


>gi|300818887|ref|ZP_07099092.1| methionyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300528506|gb|EFK49568.1| methionyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|225012064|ref|ZP_03702501.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003619|gb|EEG41592.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 684

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 132/545 (24%), Positives = 252/545 (46%), Gaps = 41/545 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ A+ Y N   HIGH A   + AD+  R+ R  G DVLF  G+DEHG  I+  A+
Sbjct: 3   KRYTVTAALPYTNGPIHIGHLAGVYVPADIYTRYLRCQGKDVLFICGSDEHGVAISLKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+     RD  +   I++D++ RT+ + H++T + ++K +  K       
Sbjct: 63  KEGKTPQEIIDKYDLIIRDSFEKFGIAFDNYSRTSREIHYETAQEIFKNLEAKSVFELKE 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
               +    + +  D  V             G   +   +  N  + ++ +         
Sbjct: 123 SEQLFDEEAQQFLADRFVTGTCPICSHPEAYGDQCESCGSSLNATELIDPKSTISGGKPA 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 ++  L+ Y+D + ++     +         +V S+V +GL+  +++R   DWGI
Sbjct: 183 LKSTKHWYLPLNRYEDFIKNWILEGHKKDWKPNVYGQVKSWVDNGLQPRAVTRD-LDWGI 241

Query: 219 KIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P       ++YVW DA   Y+++T      +G+  + +  D     +H IGKD + FH
Sbjct: 242 PVPVIGGEGKVLYVWFDAPIGYISSTKEWAQQNGTDWEPYWKDKETQLVHFIGKDNIVFH 301

Query: 272 AIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P  L  + +  LP+ V ++ F+  +G+KIS S    +   E +EE     D LRY 
Sbjct: 302 CIIFPIILHANGHYILPENVPANEFLNLEGQKISTSKNWAVWLHEYLEEFPDQQDVLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +  D  + R N +L    GN ++R V +  K YDG +P     T+ D+
Sbjct: 362 LTANAPETKDNDFTWDEFQARNNNELVAIFGNFINRVVVLTHKYYDGKVPKSENLTDFDK 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           ++L   + + Q+I + ++      A   ++ L    ++Y    +PW+L KT+P R +T++
Sbjct: 422 AVLEEMALLPQKIGQAIEQYRFREASQTLMQLARLGNKYLADSEPWKLIKTDPQRVTTIM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHKTFDP 505
           +  +++   L+IL +  +P  A K+  +L +  +   + S+      +  G  + + +  
Sbjct: 482 HTALQIAAGLSILCEPILPFTAEKLTKMLCLNSKKLSWDSVSDASTLINAGHQIGEAYL- 540

Query: 506 IFPRF 510
           +F + 
Sbjct: 541 LFQKI 545


>gi|82543475|ref|YP_407422.1| methionyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123728409|sp|Q323B4|SYM_SHIBS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81244886|gb|ABB65594.1| methionine tRNA synthetase [Shigella boydii Sb227]
 gi|332097116|gb|EGJ02099.1| methionyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 677

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQESRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|323968243|gb|EGB63652.1| methionyl-tRNA synthetase [Escherichia coli M863]
          Length = 680

 Score =  357 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|320173698|gb|EFW48886.1| Methionyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 677

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTHSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|325497930|gb|EGC95789.1| methionyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 677

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|218549528|ref|YP_002383319.1| methionyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226695282|sp|B7LV75|SYM_ESCF3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218357069|emb|CAQ89701.1| methionyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
          Length = 677

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|301305156|ref|ZP_07211255.1| methionyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301329302|ref|ZP_07222270.1| methionyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301644128|ref|ZP_07244138.1| methionyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|309792992|ref|ZP_07687420.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331678063|ref|ZP_08378738.1| methionine--tRNA ligase [Escherichia coli H591]
 gi|331683792|ref|ZP_08384388.1| methionine--tRNA ligase [Escherichia coli H299]
 gi|300839560|gb|EFK67320.1| methionyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300844392|gb|EFK72152.1| methionyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301077528|gb|EFK92334.1| methionyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|308123278|gb|EFO60540.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331074523|gb|EGI45843.1| methionine--tRNA ligase [Escherichia coli H591]
 gi|331078744|gb|EGI49946.1| methionine--tRNA ligase [Escherichia coli H299]
 gi|332101085|gb|EGJ04431.1| methionyl-tRNA synthetase [Shigella sp. D9]
          Length = 680

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|157161597|ref|YP_001458915.1| methionyl-tRNA synthetase [Escherichia coli HS]
 gi|170019566|ref|YP_001724520.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|188496162|ref|ZP_03003432.1| methionyl tRNA synthetase [Escherichia coli 53638]
 gi|256022200|ref|ZP_05436065.1| methionyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|187647720|sp|A8A1X8|SYM_ECOHS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189083260|sp|B1IYW7|SYM_ECOLC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157067277|gb|ABV06532.1| methionyl tRNA synthetase [Escherichia coli HS]
 gi|169754494|gb|ACA77193.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|188491361|gb|EDU66464.1| methionyl tRNA synthetase [Escherichia coli 53638]
 gi|309702432|emb|CBJ01756.1| Methionyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 677

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|167551107|ref|ZP_02344862.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205324014|gb|EDZ11853.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 673

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ATELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|261867564|ref|YP_003255486.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412896|gb|ACX82267.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 686

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 131/543 (24%), Positives = 239/543 (44%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A
Sbjct: 4   NKRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +D   +         +IS+D++  T  + + +   +++ ++ + G I   
Sbjct: 64  DQMGITPEQLIDDVRQKHMADFAGFNISFDNYHSTHSEENRELSELIYNRLKENGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------- 158
             S  Y      +  D  V             G + +   A ++P +             
Sbjct: 124 TISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELISPRSVVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPSFEAMLKNWLGSGS---LQSEVVNKMQEWFEAGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
            +IP++     YVW+DA   Y+ +   L            W  D      H IGKDI+ F
Sbjct: 241 FQIPNEEGKYFYVWLDAPIGYMASFKNLCKRESHIDFDGLWRKDSDAELYHFIGKDIMYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A+   P  +F HG++   GEK+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGADFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN DL N + NL SR+   I K +DG +    A +  D++
Sbjct: 361 AKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AASLDDQA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
           +        ++I    +N+   +A+ ++++L  + ++Y D + PW + K          V
Sbjct: 417 LFDEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYIDDKVPWVIAKEAGKDAELQAV 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + +++ R L   L+  +PKLA +    L        + +L Q L     +   F  +F
Sbjct: 477 CSMGIQLFRVLMGYLKPVLPKLAERAEAFLQ---SKLTWANLAQPLL-NHPI-APFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 SRL 534


>gi|16130052|ref|NP_416617.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108932|ref|AP_002712.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081738|ref|YP_001731058.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238901300|ref|YP_002927096.1| methionyl-tRNA synthetase [Escherichia coli BW2952]
 gi|135149|sp|P00959|SYM_ECOLI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710904|sp|B1X7K4|SYM_ECODH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|259511558|sp|C4ZSJ8|SYM_ECOBW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|42016|emb|CAA39315.1| methionine-tRNA ligase [Escherichia coli K-12]
 gi|146829|gb|AAA24161.1| methionyl-tRNA synthetase (metG) [Escherichia coli]
 gi|1788432|gb|AAC75175.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675229|dbj|BAE76592.1| methionyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169889573|gb|ACB03280.1| methionyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238861758|gb|ACR63756.1| methionyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260448789|gb|ACX39211.1| methionyl-tRNA synthetase [Escherichia coli DH1]
 gi|323940818|gb|EGB37006.1| methionyl-tRNA synthetase [Escherichia coli E482]
          Length = 677

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|300821783|ref|ZP_07101928.1| methionyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300525625|gb|EFK46694.1| methionyl-tRNA synthetase [Escherichia coli MS 119-7]
          Length = 677

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++ +      +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLTS----ELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|228470762|ref|ZP_04055611.1| methionyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307526|gb|EEK16528.1| methionyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 683

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 135/544 (24%), Positives = 239/544 (43%), Gaps = 38/544 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  IA 
Sbjct: 4   QQFKRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +  VD+     ++    L I +D + RTT + H  T    + K+ + G + 
Sbjct: 64  KAKAEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTASAFFTKLYESGKLI 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY--------YNAQHNPV--------------- 157
           +     +Y    + +  D  +       +          A    +               
Sbjct: 124 EQTSEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGA 183

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  E + ++  L  Y+  L  +     +   P     +  S++  GL+  +++R   D
Sbjct: 184 KPELRETKHWYLPLGDYESFLREWILEGHKEWKPNVY-GQCKSWLDLGLQPRAVTRD-LD 241

Query: 216 WGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +        ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 242 WGIPVPLQGAEGKVLYVWFDAPIGYISNTKELLPDSWRTWWCDPETRLIHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYF 328
            I +PA      +  LP  V ++ F+  +G+KIS S    I   E ++E+      LRY 
Sbjct: 302 CIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  TE DE
Sbjct: 362 LTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGRLTEIDE 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L   + +  E+ + +++     AL   + L    ++Y    +PW++ K++PDR +T+L
Sbjct: 422 EMLREVAAIPAELDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATIL 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPI 506
           ++ ++++  L I    F P    ++  +L V +E   F        L  G  L  T + +
Sbjct: 482 HLALQLVGNLTIAFAPFTPFSTRRLLAMLQVGEEGFAFSRFGATDLLPEGHQLG-TPELL 540

Query: 507 FPRF 510
           F + 
Sbjct: 541 FEKI 544


>gi|62128373|gb|AAX66076.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715215|gb|EFZ06786.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|326628382|gb|EGE34725.1| methionine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 704

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 246/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 33  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 93  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 152

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 153 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 212

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 213 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 269

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 270 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 329

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 330 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 389

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 390 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 445

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 446 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 505

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L     ++ TF  ++ 
Sbjct: 506 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLLS-HKVN-TFKALYN 560

Query: 509 RF 510
           R 
Sbjct: 561 RI 562


>gi|218705643|ref|YP_002413162.1| methionyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293405583|ref|ZP_06649575.1| metG [Escherichia coli FVEC1412]
 gi|298381264|ref|ZP_06990863.1| methionyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300901272|ref|ZP_07119370.1| methionyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|226695280|sp|B7NCE4|SYM_ECOLU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218432740|emb|CAR13634.1| methionyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284922102|emb|CBG35181.1| Methionyl-tRNA synthetase [Escherichia coli 042]
 gi|291427791|gb|EFF00818.1| metG [Escherichia coli FVEC1412]
 gi|298278706|gb|EFI20220.1| methionyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300355269|gb|EFJ71139.1| methionyl-tRNA synthetase [Escherichia coli MS 198-1]
          Length = 677

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWHGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|257465312|ref|ZP_05629683.1| methionyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450972|gb|EEV25015.1| methionyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 687

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 134/544 (24%), Positives = 244/544 (44%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MSNTRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHEVHFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  +++   +        +IS+D++  T  + + +    ++KK+ + G I 
Sbjct: 61  NAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTAMYKKLKENGFIK 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------- 160
               S  +    + +  D            E   G + +   + ++P+  +         
Sbjct: 121 SRVISQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L A+++ L ++  S     L  E  N++  + +SGL+   +SR    
Sbjct: 181 TPIVKESEHFFFDLPAFEEMLKAWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-----LHVIGKDILR 269
           +G  IPD      YVW+DA   Y+ +   L +  G   + FW  D      H IGKDI+ 
Sbjct: 238 FGFPIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLDYQSFWQKDSTAELYHFIGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L       P  +F+HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHSLFWPAMLEGCEQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYY 357

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++    +D         +RVN+D+ N + NL SR+   I K ++G +    A +  D+
Sbjct: 358 AAKLNERIEDLDLSLTDFIQRVNSDIVNKLVNLASRNAGFIAKRFEGKL----ATSLDDQ 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++ +      ++I  + + +  ++A+  ++ L  + ++Y D + PW + K          
Sbjct: 414 ALFAEFVAQSEQIAAHYEAREFNKAIRVIMDLCDKANKYIDDKAPWVIAKEEGKEAELQA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + +E+ R L   L+  +P+LA +    L        + ++DQ L  G  +   F  +
Sbjct: 474 VCSMGIELFRILMSYLKPVLPQLAERAEAFLQ---SELRWDNIDQPLL-GHSV-APFKSL 528

Query: 507 FPRF 510
           F R 
Sbjct: 529 FTRL 532


>gi|182415461|ref|YP_001820527.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842675|gb|ACB76927.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 517

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 188/512 (36%), Positives = 280/512 (54%), Gaps = 18/512 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI Y N  PH+GHAYE ++ DV+ARF R  G  V F TGTDEHGQK+  +A+ 
Sbjct: 2   KSFYITTAIDYVNGSPHLGHAYEKVLTDVIARFRRQMGDRVHFLTGTDEHGQKVQASARK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + F DQ S  FR +   L+IS DDFIRTTE+RH    R + +++ DKG+IYK  Y
Sbjct: 62  LGIPPQQFADQVSAEFRALLPKLNISNDDFIRTTEERHKRVVRDVLQRLFDKGEIYKAEY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G+YS R E +  D +         +      V  + E  YFF+L AYQD L+ Y   H 
Sbjct: 122 KGFYSTRQEQFLQDKD---RNPDGSWPEIFGEVTEITESNYFFKLRAYQDWLIEYLTQHE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +F+ P  R+ +V+ F+K  L DL +SR     +WGI +P D  Y+ YVW DAL NY    
Sbjct: 179 DFVFPRYRQKQVLEFLKEPLNDLCISRPRERLEWGISLPFDEGYVTYVWFDALLNY---- 234

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +    K   WPA  HVIGKDI +  HA+YWP  L +A + LP+ + +HG+ L +G 
Sbjct: 235 ---YSAVVDKPGTWPA-YHVIGKDILVPPHAVYWPIMLQAAGIELPRGIIAHGWWLQRGA 290

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++++ E G DA RYFL+RE+  G+D  + ++    R N++LAN +GNL
Sbjct: 291 KMSKSTGNALNPLDLVGEFGADAFRYFLMREMNVGQDSDFTREQFLVRYNSELANNLGNL 350

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+R+++M  +   G++P P A  +++  + ++  +   E     +    H AL + ++ V
Sbjct: 351 VNRTLNMTTRFAGGVLPAPEAGDDTERELRALWDKTRDECLPLNEEFQFHTALERAMTFV 410

Query: 422 SEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + Y + + PW+L K+    +     T L    E +R     +Q  +P  A KI  +L
Sbjct: 411 TATNAYIEKRAPWKLGKSAEPHDQALLRTSLATMAEALRLAVASVQHVIPAAAEKINGVL 470

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                      L    K           +FPR
Sbjct: 471 GYTPGPVWRDELVWGTKLTGAKVAPALVLFPR 502


>gi|300948209|ref|ZP_07162332.1| methionyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300955139|ref|ZP_07167541.1| methionyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|331653541|ref|ZP_08354542.1| methionine--tRNA ligase [Escherichia coli M718]
 gi|405895|gb|AAA60526.1| methionyl-tRNA synthetase [Escherichia coli]
 gi|300317934|gb|EFJ67718.1| methionyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300452257|gb|EFK15877.1| methionyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|315136745|dbj|BAJ43904.1| methionyl-tRNA synthetase [Escherichia coli DH1]
 gi|323936728|gb|EGB33013.1| methionyl-tRNA synthetase [Escherichia coli E1520]
 gi|331048390|gb|EGI20466.1| methionine--tRNA ligase [Escherichia coli M718]
 gi|744213|prf||2014253G Met-tRNA synthetase
          Length = 680

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|317492497|ref|ZP_07950925.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919489|gb|EFV40820.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 684

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 237/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I ADV  RF R+ G +V F    D HG  I   AQ 
Sbjct: 11  RKILVTCALPYANGSIHLGHMLEHIQADVWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 71  LGIEPEQMIAAVSQEHQKDFSDFNISYDNYHSTHSEENRELSSLIYGRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 131 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPIM 190

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 191 RESEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L          +FW  D      H IGKDI+ FH+
Sbjct: 248 IPDAPGKYFYVWLDAPIGYMGSFKNLCEKRSDLSFDEFWRKDSSTELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  VF HG++   G K+SKS G  +     ++ +  D LRY+   +
Sbjct: 308 LFWPAMLEGSNFRKPSNVFVHGYVTVNGAKMSKSRGTFVQARTYLDHLDPDCLRYYYAAK 367

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +        +D ++ 
Sbjct: 368 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKLSE----HLADPALY 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                   EI +  +N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 424 QTFVNAADEIAQAYENRESGKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        +  + Q L  G  ++  F  +F R
Sbjct: 484 MGINLFRVLMTYLKPVLPSLSERTETFLNTE---LTWDGIAQPLL-GHQVNA-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|301021168|ref|ZP_07185205.1| methionyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300398256|gb|EFJ81794.1| methionyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 680

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWHGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|312210263|emb|CBX90350.1| similar to methionyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 585

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 189/503 (37%), Positives = 273/503 (54%), Gaps = 20/503 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y NA PH+GH Y M++AD+  R+H L G   L  TGTDEHG KI +AA 
Sbjct: 49  KKPYYITTPIFYVNAAPHVGHLYTMVLADIHKRWHVLKGEKALLCTGTDEHGLKIQRAAA 108

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV  K F D+ +  F+D+A   +I+ D F+RTT++ H D  +  W  + +KG IY+  
Sbjct: 109 KAGVDPKTFCDRGAEIFKDLAKKAEIANDHFVRTTDREHKDAVQYAWFLLQEKGLIYEQK 168

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG------QYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           + GWYS+ DE +Y    V    D              + V+W  EE Y FRLS ++DKLL
Sbjct: 169 HEGWYSVSDECFYPQSGVQPWLDPVTGRKIITSIETGSEVEWSSEENYHFRLSLFRDKLL 228

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
            +++ +PE+I P  R  EVI+ V+SGL+DLS+SR     +WGI++P D    +YVW+DAL
Sbjct: 229 QFFKENPEWITPEHRMKEVIAAVESGLEDLSISRPYDRLNWGIRVPGDDTQTIYVWLDAL 288

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NY T  GY   P    A  WPAD HVIGKDI+RFH IYWPAFL++ NLPLP+K+ +H  
Sbjct: 289 LNYATKAGYPWAPGYEHAGGWPADCHVIGKDIVRFHCIYWPAFLMALNLPLPRKIMTHAH 348

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKS G V+DP   ++  G D +R++L  +     DG YD   + K     L+
Sbjct: 349 WTLFGKKMSKSTGTVVDPFHALDRFGPDVMRFYLATDGGTVDDGNYDNSRIIKLYTTFLS 408

Query: 356 NGIGNLVSR-------SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             +GN+ SR       SV   ++   G  P   A     +   +    V  ++ +  +  
Sbjct: 409 QQLGNMASRVMRGKKWSVRGAVQRVGGRSPDEWAEGPGSKFYKNSLCNVAAQMDDAFETY 468

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPW----ELKKTNP-DRASTVLYVTVEVIRQLAILLQ 463
              RA   +   V   +++F    PW          P +    ++++  E +R   ILLQ
Sbjct: 469 DPRRATLLISEFVRGSNKFFQMSSPWDKCLSYAPDEPGEEVDKIIFLAAESLRIAGILLQ 528

Query: 464 AFVPKLANKIFDILFVADENRCF 486
            ++P  A ++ D L VA E R F
Sbjct: 529 PYMPNKAAELLDQLGVARERRGF 551


>gi|14521189|ref|NP_126664.1| methionyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14548275|sp|Q9V011|SYM_PYRAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49258778|pdb|1RQG|A Chain A, Methionyl-Trna Synthetase From Pyrococcus Abyssi
 gi|5458407|emb|CAB49895.1| metS methionyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 722

 Score =  356 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 143/553 (25%), Positives = 255/553 (46%), Gaps = 57/553 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD+     +       IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EGRSPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                       P+ +
Sbjct: 123 KQAYCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ ++  + ++L  + E  P        +N V+S+++ GL++ +++R   +WGI 
Sbjct: 183 RDSAHYYIKMQDFAERLKRWIEKQPWK---PNVKNMVLSWIEEGLEERAITRD-LNWGIP 238

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T              K+W         +H IGKD
Sbjct: 239 VPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKD 298

Query: 267 ILRFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL+           A   LP  + ++ ++  +G+K S S    I   E 
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K R+N +L N +GN V R+++ + + +DG+
Sbjct: 359 LDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGV 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D   L    +  +E+ E + N     AL +V+SL S  +RYFD ++PW+ 
Sbjct: 419 VPERGELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFDHKQPWKT 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            K +  R  T + +++++++ L ILL+ F+P  + KI+ +L + DE + ++   + L  G
Sbjct: 479 AKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNL-DEVKRWE--FRELPAG 535

Query: 497 FMLHKTFDPIFPR 509
             + K  + +F +
Sbjct: 536 HKVRKP-EILFKK 547


>gi|237751267|ref|ZP_04581747.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372633|gb|EEO23024.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 663

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 193/528 (36%), Positives = 291/528 (55%), Gaps = 27/528 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  ++T I Y N  PHIGHAY  I+ADV+ ++  L G DV F TGTDEHGQKI +AA+  
Sbjct: 2   KKLLTTPIYYVNDVPHIGHAYTTILADVMKKYWTLRGNDVFFLTGTDEHGQKIEEAAKKH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+ T  + +  S  FRD     DI YD FIRTT   H  + +  ++ + D+GDIYKG Y 
Sbjct: 62  GIKTIEYANSISEKFRDTWREYDIDYDKFIRTTYFEHILSVQKAFEIMYDRGDIYKGAYE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E+++   +V  G      +      + ++EE YFF LS YQDKLL++Y  +P+
Sbjct: 122 GMYCVGCESFFTQTQVIDGIYCPDCS-GKKETRLVKEESYFFALSKYQDKLLAWYRENPD 180

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYL--- 239
            I+P  +RNEVI FV+ GL+DLS++R +F+WGIKIP    D ++I+YVW+DAL NY    
Sbjct: 181 CIVPSHKRNEVIKFVEQGLQDLSITRISFEWGIKIPLKLRDSKHIIYVWLDALMNYASAL 240

Query: 240 -------------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
                        +     +    SK +++    H++GKDILRFHAIYWPAFL+S +LPL
Sbjct: 241 GYGLDYNNAKEQLSYKMEQNPCLESKMEYFNNTTHIVGKDILRFHAIYWPAFLMSLDLPL 300

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK +  HG+    G K+SKS+GNVI P+++      D  RYFL+RE+  G+DG + +  L
Sbjct: 301 PKHILVHGWWTIDGVKMSKSIGNVIHPLDIKNAYPTDIFRYFLLREVPFGQDGDFSQIAL 360

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             R N +L+N +GNL++R + M  K +     +      +  S     SR++ +    M 
Sbjct: 361 INRNNGELSNDLGNLLNRLIGMSEKYF-QFDLSKSYDENAYISQKEEISRIINQSLAYMD 419

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAF 465
           +   H+ L  V  L    +       PWEL K          L +   ++ + A+LL   
Sbjct: 420 SMQPHKFLESVWELFYLANTMITQIAPWELMKQEKSIECKAFLNLIANILAKAALLLYPI 479

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFM---LHKTFDPIFPRF 510
           +P    +I   L ++ +++ F +L   +K G++   + +    +FP+ 
Sbjct: 480 LPNSCKEISKALNISIDSKQFDTL--IIKQGYIQDFMIQKVCVLFPKI 525


>gi|168236320|ref|ZP_02661378.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194737671|ref|YP_002115244.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|226710922|sp|B4TNL2|SYM_SALSV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194713173|gb|ACF92394.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197290599|gb|EDY29954.1| methionyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 677

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 247/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFEEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAVVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|296205176|ref|XP_002749647.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 1
           [Callithrix jacchus]
          Length = 593

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 186/540 (34%), Positives = 273/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV---LFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRSPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPTELCDRISEQFQQLFQEAGISCTDFIRTTEARHRVAVQQFWGVLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V       G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTWQPGPSGDSLPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ ++   L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H  
Sbjct: 284 VNYLTVIGYPNA---EFKFWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELA 400

Query: 356 NGIGNLVSRSVSMILKD--------YDGMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +           +     PG           D +++S  + + + +
Sbjct: 401 DALGGLLNRCTAKRINPSETYPAFCTNCFPSEPGLMGPSVRAQAEDYALVSAVATLPKRV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A   STVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWDSPVDAPWLSTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FP+ 
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSVSERSLGKLYFLPRFYGHPCPFEGRRLGPETGVLFPKL 580


>gi|300770034|ref|ZP_07079913.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762510|gb|EFK59327.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 689

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 256/542 (47%), Gaps = 42/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++++  I++A+ Y N   HIGH A   I  D+  R+ RL+  DV++  G+DEHG  I 
Sbjct: 3   ITDKKRYTITSALPYANGPLHIGHLAGAYIPGDIFVRYLRLNQKDVVYVCGSDEHGAAIT 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+ ++  ++  +   IS+D + RT+E  HH   +  +  + +KG+ 
Sbjct: 63  IKAKKEGITPREIIDKYNQQIKESFEEFGISFDIYHRTSEPVHHQLSQEFFLNLYNKGEF 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +     +Y      +  D  +             G   +      +P   +        
Sbjct: 123 IERFSEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKCGTSLSPTDLINPISTLSG 182

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  YQ  L  +     +  L      + +S++KSGL+  S++R   
Sbjct: 183 KTPVLKETKHWYLPLDKYQPWLEKWLIEGKKDELKSNVYGQCLSWLKSGLQPRSMTRD-L 241

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD----LHV 262
           DWG+ +P +      +YVW+DA   Y++ T      +G   + +      P D    +H 
Sbjct: 242 DWGVDVPLEEAEGKKLYVWLDAPIGYISATKQWALDNGKNWEDYWKEQPDPEDNSCLIHF 301

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +PA L    +  LP+ + ++ F+  +G+K+S S  + +   E ++E  
Sbjct: 302 IGKDNIVFHCIIFPAILHAHGDYILPENIPANEFLNLEGDKLSTSRNHAVWLHEYLQEFP 361

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L   +    D  +     + RVN +L   +GN ++R + +  K +DG I +
Sbjct: 362 GKQDELRYVLTSILPETSDSEFTWKDFQARVNNELVAILGNFINRVMVLSHKYFDGKILS 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + D+ + +   +  ++I  ++       ALAQ +++    ++Y    +PW++ KT
Sbjct: 422 GSDLQDEDKQVFAELKKYPEQITHSINQYRFREALAQFMNVARLGNKYLAEAEPWKVIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + +R  TVL V++++   LAIL Q F+PK A K+F++L +  ++      +  LK G  L
Sbjct: 482 DEERVKTVLNVSLQIAANLAILAQPFLPKTATKLFEMLNLPQQDWERAGEENLLKDGHEL 541

Query: 500 HK 501
            +
Sbjct: 542 GE 543


>gi|156933303|ref|YP_001437219.1| methionyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156531557|gb|ABU76383.1| hypothetical protein ESA_01115 [Cronobacter sakazakii ATCC BAA-894]
          Length = 690

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 19  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    +     +++ ++ + G I     
Sbjct: 79  LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 139 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 198

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 199 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 255

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      HVIGKDI+ FH
Sbjct: 256 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHVIGKDIVYFH 315

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 316 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYAA 375

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++
Sbjct: 376 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPAL 431

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 432 YQTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 491

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+L  +    L V      +  ++  L  G  ++ +F  ++ 
Sbjct: 492 SMGINLFRVLMTYLKPVLPELCARAEAFLNVE---LTWDGVNAPLL-GHKVN-SFKALYN 546

Query: 509 RF 510
           R 
Sbjct: 547 RI 548


>gi|251792930|ref|YP_003007656.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534323|gb|ACS97569.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 686

 Score =  356 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 237/543 (43%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G D+ F    D HG  I   A
Sbjct: 4   SKRKILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNDIHFVCADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +D             +IS+D++  T  + + +    ++ ++ + G I   
Sbjct: 64  DQMGITPEQLIDDVRHKHMADFAGFNISFDNYHSTHSEENREFSEFIYNRLKENGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------- 158
             S  Y      +  D  V             G + +   A ++P +             
Sbjct: 124 TISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCAATYSPTELINPHSVVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L +++  L ++  S     L  E  N++  + ++GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPSFEAMLKNWLGSGS---LQPEVVNKMQEWFEAGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRF 270
            +IP+      YVW+DA   Y+ +   L   +       FW  D      H IGKDI+ F
Sbjct: 241 FQIPNTEGKYFYVWLDAPIGYMASFKNLCKRESSIDFDSFWCKDSDVELYHFIGKDIMYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  +F HG++   GEK+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGFRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN DL N + NL SR+   I K +DG +    A    D++
Sbjct: 361 AKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKL----AAALDDQA 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +      ++I    +N+   +A+ ++++L  + ++Y D + PW + K          V
Sbjct: 417 LFNEFIAQSEQIATYYENREFGKAIREIMALTDKANKYIDDKAPWVIVKEEGKDAELQAV 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + +++ R L   L+  +PKLA +    L        + +L Q L     +   F  +F
Sbjct: 477 CSMGIQLFRVLMGYLKPVLPKLAERAEAFLLAE---LTWANLAQPLL-NHQI-APFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 SRL 534


>gi|226292612|gb|EEH48032.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 552

 Score =  356 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 195/543 (35%), Positives = 289/543 (53%), Gaps = 36/543 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  YI+T I Y NA PH+GH Y MI+ DVL R+  L G  D    TGTDEHG KI +A
Sbjct: 9   DKKPFYITTPIFYVNAAPHVGHLYTMILGDVLKRWQILLGDTDAKLLTGTDEHGLKIQQA 68

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL-----------------DISYDDFIRTTEKRHHD 104
           A  AG+  +   DQN + F+   +                   +++YD FIRTT+ +H D
Sbjct: 69  AAVAGMAPQELCDQNCQTFKTPCEGTAARILWGDKFKNLARTVNVNYDHFIRTTDPQHKD 128

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQ 158
             R  W  ++ +G IY   + GWYS+ DEA+Y    V    D                VQ
Sbjct: 129 AVRYFWDMLNHRGYIYTAKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQ 188

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDW 216
           W  EE Y FRLSA+++ LL +Y +HP FI P    +++++ + +GL+DLS+SR     +W
Sbjct: 189 WTSEENYHFRLSAFKEPLLEHYRNHPNFITPKHYMDDMMNAISAGLQDLSISRPASRLNW 248

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           GI +P D   ++YVW+DAL NY+T  GY   P       WPAD+ V+GKDILRFH IYWP
Sbjct: 249 GIPVPYDESQVIYVWLDALVNYITYAGYPFPP--DAKSIWPADVQVVGKDILRFHCIYWP 306

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           AFL++  LPLP+++ +H       EK+SKS GNV++P   IE  GVD +R+FLV + A  
Sbjct: 307 AFLMALGLPLPRQIMAHAHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQV 366

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  Y+   + +R    L  G+GNL SR +          +   G               
Sbjct: 367 SDSGYENSYIVERYKKGLQRGLGNLASRVLRGKKWIVRSSVVMAGEGRFPRTEHQDFLES 426

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ R+ M+     +AL  ++ ++ + ++YF   KPW L  +N    ++V+Y T E +R
Sbjct: 427 IPEKARDEMRQLDPRKALNSIMEIIIQTNKYFHQMKPWILAMSNVVMLNSVIYSTAESLR 486

Query: 457 QLAILLQAFVPKLANKIFDILFV--ADENRCFQS------LDQRLKPGFMLHKTFDPIFP 508
              ILLQ F+P+ ++++ D+L V  A E R F +      LD  +    + H T   +FP
Sbjct: 487 IAGILLQPFMPQKSSELLDMLGVARAAEKRNFDAAKFGRDLDYGVPLVDLKHGTTGTLFP 546

Query: 509 RFL 511
             +
Sbjct: 547 PLI 549


>gi|307138768|ref|ZP_07498124.1| methionyl-tRNA synthetase [Escherichia coli H736]
 gi|315618108|gb|EFU98699.1| methionyl-tRNA synthetase [Escherichia coli 3431]
          Length = 677

 Score =  356 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINMFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|187649791|sp|A7MHL3|SYM_ENTS8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIAEMSKEHQTDFAGFNISYDNYHSTHSDENRVLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      HVIGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHVIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYAA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGEL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YQTFTDAAAVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+L  +    L V      +  ++  L  G  ++ +F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPELCARAEAFLNVE---LTWDGVNAPLL-GHKVN-SFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|331663606|ref|ZP_08364516.1| methionine--tRNA ligase [Escherichia coli TA143]
 gi|331059405|gb|EGI31382.1| methionine--tRNA ligase [Escherichia coli TA143]
          Length = 680

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +         ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRSDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWHGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|323977697|gb|EGB72783.1| methionyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 680

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWHGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|187649790|sp|A4WCF6|SYM_ENT38 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 241/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGISPEQMITEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  +      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLFDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIGKRFDGVM----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  + +   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ +    L        + ++ Q L     ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERAEAFLNTE---LTWDAIQQPLLS-HKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|187649798|sp|A3MZ70|SYM_ACTP2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 679

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 132/540 (24%), Positives = 238/540 (44%), Gaps = 46/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A  
Sbjct: 3   RKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     
Sbjct: 63  QGITPEQLIEKAKADHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVI 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
           S  +    + +  D            E   G + +   + ++P+  +             
Sbjct: 123 SQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAISGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPNFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 476 GIELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 530


>gi|331642730|ref|ZP_08343865.1| methionine--tRNA ligase [Escherichia coli H736]
 gi|331039528|gb|EGI11748.1| methionine--tRNA ligase [Escherichia coli H736]
          Length = 680

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINMFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|146312363|ref|YP_001177437.1| methionyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145319239|gb|ABP61386.1| methionyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 680

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 241/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGISPEQMITEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  +      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLFDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIGKRFDGVM----AAELADPAL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  + +   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ +    L        + ++ Q L     ++ TF  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPTLSERAEAFLNTE---LTWDAIQQPLLS-HKVN-TFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|295098166|emb|CBK87256.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 677

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLKAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++        +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSA----ELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     + E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L  G  ++ TF  ++ 
Sbjct: 479 TMGLNMFRVLMTWLKPVLPQLAARAEAFLNTE---LTWDAIQQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|293396970|ref|ZP_06641244.1| methionine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291420441|gb|EFE93696.1| methionine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 676

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 239/541 (44%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  MGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A + +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKL----AASLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   ++   RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 QTFTDAADSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        ++ + Q L     ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERAEAFLNGE---LSWEGIQQPLL-DHTVN-PFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|331673641|ref|ZP_08374404.1| methionine--tRNA ligase [Escherichia coli TA280]
 gi|331068914|gb|EGI40306.1| methionine--tRNA ligase [Escherichia coli TA280]
          Length = 680

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 137/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K     A    + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEDRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWHGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|296103770|ref|YP_003613916.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058229|gb|ADF62967.1| methionyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 677

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 245/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +  + + S+  +      DISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  LGVSPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSEENRELSTLIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYAA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++        +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSA----ELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     + E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L  G  ++ TF  ++ 
Sbjct: 479 TMGLNMFRVLMTWLKPVLPQLAARAEAFLNTE---LSWDAIQQPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|322514619|ref|ZP_08067650.1| methionyl-tRNA synthetase [Actinobacillus ureae ATCC 25976]
 gi|322119453|gb|EFX91552.1| methionyl-tRNA synthetase [Actinobacillus ureae ATCC 25976]
          Length = 685

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 241/542 (44%), Gaps = 46/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A
Sbjct: 4   QKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I   
Sbjct: 64  AKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTEMYKKLRANGFIKSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             S  +    + +  D            E   G + +   + ++P+  +           
Sbjct: 124 VISQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E + +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 IVKESKHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
             IPD      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH
Sbjct: 241 FPIPDAENKFFYVWLDAPIGYMASFKNLCDRSGLNFDEFWKKDSETELYHFIGKDIVYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 SLFWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAA 360

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++    +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++
Sbjct: 361 KLNERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----AEKLEDEAL 416

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
            +      ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K          V 
Sbjct: 417 FAEFIAQSEQIATHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F 
Sbjct: 477 SMGIELFRVLMSYLKPVLPQLAERAEAFLQAE---LTWDNIHQPLL--GKNVAPFKSLFS 531

Query: 509 RF 510
           R 
Sbjct: 532 RL 533


>gi|270261058|ref|ZP_06189331.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044542|gb|EFA17633.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 722

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 133/538 (24%), Positives = 233/538 (43%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 53  KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHEVHFICADDAHGTPIMLKAQQ 112

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 113 LGIKPEEMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYGRLKENGFIKNRTI 172

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +   A ++P + ++ +          
Sbjct: 173 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPIL 232

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  +    +       L  +  N++  + +SGL+   +SR    +G +IPD
Sbjct: 233 RDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPD 292

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+++W
Sbjct: 293 APGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWRKDSSTELYHFIGKDIVYFHSLFW 352

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +++ 
Sbjct: 353 PAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAKLSS 412

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++    
Sbjct: 413 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFGGQL----ADNLADPALYQTF 468

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
                 I E   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 469 VDAAGSIAEAYASRESGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGI 528

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P L  +    L        + ++ Q L  G  ++  F  +F R 
Sbjct: 529 NLFRVLMTYLKPVLPSLTERTEAFLNCE---LTWDAIQQPLL-GHQVNA-FKALFNRI 581


>gi|224583343|ref|YP_002637141.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254782871|sp|C0Q0Y1|SYM_SALPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|224467870|gb|ACN45700.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 677

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L        TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLLS--HKVNTFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|29141207|ref|NP_804549.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|29136833|gb|AAO68398.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 677

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L        TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLLS--HKVNTFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|313886004|ref|ZP_07819742.1| methionine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924534|gb|EFR35305.1| methionine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 683

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 239/544 (43%), Gaps = 38/544 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  IA 
Sbjct: 4   QQFKRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +  VD+     ++    L I +D + RTT + H  T    + K+ + G + 
Sbjct: 64  KAKAEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTASAFFTKLYESGKLI 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY--------YNAQHNPV--------------- 157
           +     +Y    + +  D  +       +          A    +               
Sbjct: 124 EQTSEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGA 183

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  E + ++  L  Y+  L  +     +   P     +  S++  GL+  +++R   D
Sbjct: 184 KPELRETKHWYLPLGDYESFLREWILEGHKEWKPNVY-GQCKSWLDLGLQPRAVTRD-LD 241

Query: 216 WGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +        ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 242 WGIPVPLQGAEGKVLYVWFDAPIGYISNTKELLPDSWRTWWCDPETRLIHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYF 328
            I +PA      +  LP  V ++ F+  +G+KIS S    I   E ++E+      LRY 
Sbjct: 302 CIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ TE DE
Sbjct: 362 LTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGSLTEIDE 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L   + +   + + +++     AL   + L    ++Y    +PW++ K++PDR +T+L
Sbjct: 422 EMLREVAAIPAALDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATIL 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPI 506
           ++ ++++  L+I    F P    ++  +L V +    F        L  G  L K  + +
Sbjct: 482 HLALQLVGNLSIAFAPFTPFSTRRLLAMLQVEEGGFAFARFGATDLLPEGHQLGKP-ELL 540

Query: 507 FPRF 510
           F + 
Sbjct: 541 FEKI 544


>gi|197336022|ref|YP_002156576.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226710937|sp|B5FG53|SYM_VIBFM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|197317512|gb|ACH66959.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 686

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 229/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G DV F    D HG  I   
Sbjct: 3   TDPRKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I  
Sbjct: 63  AQQMGISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  +    E +  D            E   G +       ++P              
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKAEEQYGDNCDNCGETYSPTDLINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGETNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVN+D+ N I NL SR+   I K +DG +    A  E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFAEPELYN 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
             ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 420 EFIAAADR----IAELYETREFGRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P+LA +    L    E   ++ + Q L     + K F  +
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLN---ETLTWEGVAQPLVA-HEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FARI 534


>gi|26335385|dbj|BAC31393.1| unnamed protein product [Mus musculus]
          Length = 587

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 183/540 (33%), Positives = 270/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 38  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 98  ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 157

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y F+LS +++ L 
Sbjct: 158 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 217

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 218 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 277

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY D        +WPA  H+IGKDIL+FHAIYWPA LL A L  P +++ H  
Sbjct: 278 VNYLTVVGYPDA---DFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRIYVHSH 334

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 335 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 394

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEI 401
           + +G L++R  +  +           A                  D ++++  + + + +
Sbjct: 395 DALGGLLNRCTAYRINPSGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKLV 454

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
                +  I++AL  V S V + + +     PW+L   +P+ A    TVL+V +E +R  
Sbjct: 455 AGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRVF 514

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FPR 
Sbjct: 515 GTLLQPVTPNLADKLLSRLGVSTTERGLGELYFLPRFYGHPCPFEGRKLGPDTGLLFPRL 574


>gi|303249714|ref|ZP_07335918.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302651281|gb|EFL81433.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 682

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 132/540 (24%), Positives = 239/540 (44%), Gaps = 46/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A  
Sbjct: 3   RKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     
Sbjct: 63  QGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVI 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
           S  +    + +  D            E   G + +   + ++P+  +             
Sbjct: 123 SQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 476 GIELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 530


>gi|16761097|ref|NP_456714.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|213428244|ref|ZP_03360994.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586109|ref|ZP_03367935.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213650020|ref|ZP_03380073.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213864934|ref|ZP_03387053.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|25009376|sp|Q8Z5C3|SYM_SALTI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|25293137|pir||AH0776 methionine-tRNA ligase (EC 6.1.1.10) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503395|emb|CAD02534.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
          Length = 677

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L        TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLLS--HKVNTFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|165975810|ref|YP_001651403.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|226710891|sp|B0BTA2|SYM_ACTPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|165875911|gb|ABY68959.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 682

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 132/540 (24%), Positives = 239/540 (44%), Gaps = 46/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A  
Sbjct: 3   RKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     
Sbjct: 63  QGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVI 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
           S  +    + +  D            E   G + +   + ++P+  +             
Sbjct: 123 SQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEITNKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 476 GIELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 530


>gi|162139570|ref|YP_217157.2| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|205353293|ref|YP_002227094.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857589|ref|YP_002244240.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|68565956|sp|Q57MI5|SYM_SALCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710917|sp|B5R0E7|SYM_SALEP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710918|sp|B5RBZ5|SYM_SALG2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|205273074|emb|CAR38026.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709392|emb|CAR33733.1| Methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 677

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+   
Sbjct: 303 SLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----AAELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P L+ ++   L        + +++Q L        TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPLLS--HKVNTFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|30425166|ref|NP_780648.1| methionyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|85681906|sp|Q499X9|SYMM_MOUSE RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|26340914|dbj|BAC34119.1| unnamed protein product [Mus musculus]
 gi|124376036|gb|AAI32344.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|148667613|gb|EDL00030.1| methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|187953681|gb|AAI37740.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 586

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 183/540 (33%), Positives = 270/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 37  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 97  ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y F+LS +++ L 
Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 217 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY D        +WPA  H+IGKDIL+FHAIYWPA LL A L  P +++ H  
Sbjct: 277 VNYLTVVGYPDA---DFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRIYVHSH 333

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEI 401
           + +G L++R  +  +           A                  D ++++  + + + +
Sbjct: 394 DALGGLLNRCTAYRINPSGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKLV 453

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
                +  I++AL  V S V + + +     PW+L   +P+ A    TVL+V +E +R  
Sbjct: 454 AGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRVF 513

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FPR 
Sbjct: 514 GTLLQPVTPNLADKLLSRLGVSTTERGLGELYFLPRFYGHPCPFEGRKLGPDTGLLFPRL 573


>gi|190149626|ref|YP_001968151.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|303252595|ref|ZP_07338758.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|226710890|sp|B3H0J7|SYM_ACTP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189914757|gb|ACE61009.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302648563|gb|EFL78756.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
          Length = 682

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 132/540 (24%), Positives = 239/540 (44%), Gaps = 46/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A  
Sbjct: 3   RKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     
Sbjct: 63  QGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVI 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
           S  +    + +  D            E   G + +   + ++P+  +             
Sbjct: 123 SQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  
Sbjct: 183 KESEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH++
Sbjct: 240 IPDAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKL 359

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +
Sbjct: 360 NERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  +
Sbjct: 416 EFIAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSM 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 476 GIELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 530


>gi|330859356|emb|CBX69702.1| methionyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 675

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 139/541 (25%), Positives = 236/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  LGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPALTERTEAFLNTE---LTWDSIEQPLL-GHQINA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|109947187|ref|YP_664415.1| methionyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714408|emb|CAJ99416.1| metS [Helicobacter acinonychis str. Sheeba]
          Length = 643

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 192/507 (37%), Positives = 297/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSAKL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +     +             +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKADNINNKVLCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI---KIPDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI   K  +DP++++YVW+DAL NY + 
Sbjct: 182 EVILPIYRKNEVTSFIEQGLLDLSITRTSFEWGILLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S  LPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLENKMVHFECARHIVGKDILRFHAIYWPAFLMSLGLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  + +    T   +  L    ++L      +    +H+AL ++  + 
Sbjct: 361 LNRLLGMAKKYFNYSLKSEKITTYYPKE-LEKVHQILDNANSFVPKMQLHKALEELFGVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAMKLASAFNVK 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +      ++ +  +P+F
Sbjct: 480 ITPTNYERFFKSKNLQDIILQDTEPLF 506


>gi|300936576|ref|ZP_07151483.1| methionyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458296|gb|EFK21789.1| methionyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 658

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|311278894|ref|YP_003941125.1| methionyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748089|gb|ADO47841.1| methionyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 677

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHQVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIAEMSQEHQADFAGFDISYDNYHSTHSDENRELSELIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L ++ + L ++  S     L  +  N++  + + GL+   +SR    +G +
Sbjct: 186 RESEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFEHGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDVTSFDEYWKKDSDAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG++   G K+SKS G  I     +  +  D+LRY+   
Sbjct: 303 SLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHLDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFIAKRFDGVL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YQTFTDAAGAIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++   L  G  ++ TF  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPQLAERTEAFLN---SELRWDAIASPLL-GHKVN-TFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|259481569|tpe|CBF75211.1| TPA: methionyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_4G07820) [Aspergillus nidulans FGSC A4]
          Length = 569

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 182/519 (35%), Positives = 268/519 (51%), Gaps = 23/519 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQ 63
           +  Y++T I Y NA PH+GH Y M++AD+L R+  L G  +    TGTDEHG KI +AA 
Sbjct: 53  KPYYVTTPIFYVNAAPHVGHLYTMVLADILKRWRTLTGDNEAQLLTGTDEHGMKIQQAAN 112

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG+ T+ F D+N   F+ +A+  ++ Y+ FIRTTE  H +  +  W+ +  +G IY   
Sbjct: 113 AAGIDTQAFCDRNCLTFKALAEAANVDYNYFIRTTEPAHKEAVQYFWEMLQHRGYIYTSK 172

Query: 124 YSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA+QD+LL
Sbjct: 173 HEGWYSVSDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLL 232

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
             Y    +FI P     +V+  V SGL DLS+SR      WGI +P+D    +YVW+DAL
Sbjct: 233 ELY--KTDFITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDAL 290

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  H  
Sbjct: 291 VNYLTKAGYPFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHAH 350

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                EK+SKS GNV++P   I+  G+D +R+FL        D  YD   + +     L 
Sbjct: 351 WTMNREKMSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQ 410

Query: 356 NGIGNLVSRSV----SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            G+GN+  R++      +              T  D++      ++  ++ + M+     
Sbjct: 411 QGLGNIAHRTIGCAKGKLRDYIINATSGNSPATADDQAYQKTLEQLSHKVAKCMEALDPR 470

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            AL +++ ++   ++YF   +PW     NP+    V++   E +R + ILLQ F+P  A 
Sbjct: 471 AALEEIVEVILLTNKYFHNSEPW----QNPEEKQRVIFNAAESMRIMGILLQPFMPNKAK 526

Query: 472 KIFDILFVADENRCFQSLDQRLKP--GFMLHKTFDPIFP 508
           K+ DIL V    R             G  + K    +FP
Sbjct: 527 KLLDILKVDPSKRDLSDAGYARDSTYGEDVKKKI--LFP 563


>gi|213019168|ref|ZP_03334975.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995277|gb|EEB55918.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 472

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 229/476 (48%), Positives = 318/476 (66%), Gaps = 9/476 (1%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            +L G +V FTTGTDEHGQKI KAA+  G+  K F D+ S  FR +A++++  YDDFIRT
Sbjct: 1   MKLAGKNVKFTTGTDEHGQKIEKAAKTKGIEPKEFTDEISVTFRKLAELMNFDYDDFIRT 60

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           TE+RH      LW ++ ++G IY   YSGWYS+RDEA+Y + E+  G            V
Sbjct: 61  TEERHEKAVIALWNRLEERGQIYLDSYSGWYSVRDEAFYQESELIYGR-----APTGAEV 115

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           QW++EE YFFRLS++Q+KLL  YE+ P FI P  R+NEV+SFVKSGL DLS+SR +F+WG
Sbjct: 116 QWIKEESYFFRLSSWQNKLLELYENQPNFIFPESRKNEVVSFVKSGLTDLSISRTSFNWG 175

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--DLHVIGKDILRFHAIYW 275
           IK+P++ ++++YVWIDALTNYLT+ G+ +  D    KFW    ++HVIGKDILRFHA+YW
Sbjct: 176 IKVPENDKHVIYVWIDALTNYLTSIGFPNIEDEEYKKFWTNSFNVHVIGKDILRFHAVYW 235

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + EE GVD LRYFL+RE + 
Sbjct: 236 PAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPINLAEEFGVDQLRYFLLREASF 295

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+DG + K  +  R+N++LAN IGNLV R++S + K   G++P        D+  L  C 
Sbjct: 296 GQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCFGVVPVVDRNLLKDDESLPNCK 355

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++ ++ +++     ++ +  +I++ S+ + Y D   PW L KT+ +R   V+Y  +E I
Sbjct: 356 AIIDQVMDHLSKYEFNQIILLIINISSKANAYIDKSAPWTLSKTDRERMDLVIYKLLEYI 415

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
           R + ILLQ  VPK A  I D L +  E R  +SL +  +  G  L K   PIF RF
Sbjct: 416 RMIGILLQPIVPKSAKMILDQLQIPKEQRDLKSLCNACVSLGITLPKP-TPIFLRF 470


>gi|312973641|ref|ZP_07787813.1| methionyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|310332236|gb|EFP99471.1| methionyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 677

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L     ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-DHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|198282147|ref|NP_001092441.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|182689574|sp|A6H7E1|SYMM_BOVIN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|148878169|gb|AAI46212.1| MARS2 protein [Bos taurus]
 gi|296490436|gb|DAA32549.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
          Length = 593

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 185/540 (34%), Positives = 272/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R HRL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 AAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEV--YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V    G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P+ I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 QWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY D        +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVVGYPDA---EFKSWWPNTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKDYDGMIP--------------TPGAFTESDESILSVCSRVLQEI 401
           + +G L++R  +  +                        G     D +++S  + + +++
Sbjct: 401 DALGGLLNRCTANKINPSGIYPAFCATCFPSEPGLVGPSGRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+++   L V+   R    L    +         G  L      +FPR 
Sbjct: 521 GTLLQPVTPSLADRLLSRLGVSSTERSLGELHFLSRFYGHPSPFEGRRLGPETGVLFPRL 580


>gi|269138540|ref|YP_003295240.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984200|gb|ACY84029.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558556|gb|ADM41220.1| Methionyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 682

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 133/541 (24%), Positives = 234/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 11  RKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T  + +     +++ ++ + G I     
Sbjct: 71  MGIAPEQMIAEVSKEHQQDFADFQISYDNYHSTHSEENRQLASLIYTRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 131 SQLYDPEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPIL 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L ++   L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 191 RESEHFFFDLPSFGAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G      +W  +      H IGKDI+ FH+
Sbjct: 248 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDYWGKESDAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  D LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYAAK 367

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +      T +D ++ 
Sbjct: 368 LSDRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGQLSD----TLADPALY 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                   EI +  + +   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 424 QTFVDAAAEIAKAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + ++ + L  G  ++  F  +F R
Sbjct: 484 MGLNLFRVLMTYLKPVLPALSARTEAFLNAE---LRWDAIAEPLL-GHRVN-PFKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|110331789|gb|ABG67000.1| methionine-tRNA synthetase 2 precursor [Bos taurus]
          Length = 589

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 185/540 (34%), Positives = 272/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R HRL         F+TGTDEHG KI +AA
Sbjct: 40  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 100 AAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYKG 159

Query: 123 CYSGWYSLRDEAYYNDDEV--YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V    G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 160 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 219

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P+ I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 220 QWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 279

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY D        +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 280 VNYLTVVGYPDA---EFKSWWPNTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 336

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 337 WTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYYDEKVVKLLDSELA 396

Query: 356 NGIGNLVSRSVSMILKDYDGMIP--------------TPGAFTESDESILSVCSRVLQEI 401
           + +G L++R  +  +                        G     D +++S  + + +++
Sbjct: 397 DALGGLLNRCTANKINPSGIYPAFCATCFPSEPGLVGPSGRAQAEDYALVSAVATLPKQV 456

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 457 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVF 516

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+++   L V+   R    L    +         G  L      +FPR 
Sbjct: 517 GTLLQPVTPSLADRLLSRLGVSSTERSLGELHFLSRFYGHPSPFEGRRLGPETGVLFPRL 576


>gi|68250200|ref|YP_249312.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335378|sp|Q4QJZ5|SYM_HAEI8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68058399|gb|AAX88652.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 682

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 131/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L   +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSDK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|327304271|ref|XP_003236827.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459825|gb|EGD85278.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 641

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 179/503 (35%), Positives = 269/503 (53%), Gaps = 22/503 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
            + +  Y++T I Y NA PHIGH Y ++IAD+L R+  L G  D    TGTDEHG KI +
Sbjct: 99  TKPKTYYVTTPIFYVNAAPHIGHLYTILIADILKRWQVLLGNGDAKLLTGTDEHGMKIQQ 158

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+  +   D+N   F+ +A   + S+D FIRTT+  H    +  W+ ++ +G IY
Sbjct: 159 AALQNGLEPQALCDRNCETFKVLAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIY 218

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG------QYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           +G + GWYS+ DE +Y    V+   D                V++ +E  Y F+LSA+QD
Sbjct: 219 EGKHEGWYSVSDETFYPASAVHSTLDPATGRKLMASIETGKEVKFSQETNYHFKLSAFQD 278

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWI 232
           +LL +Y  +PEFI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+
Sbjct: 279 RLLEHYRKNPEFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWL 338

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NY+T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +
Sbjct: 339 DALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRFHCIYWPAFLMALDLPLPRTILT 398

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H        K+SKS GNV++P+  +   GVD +R++L        D  YD   + +    
Sbjct: 399 HAHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKN 458

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCSRVLQEIRENM 405
            L  G+GNL SR +     +    +           A  +S+   +    +V   +   M
Sbjct: 459 ILQGGLGNLCSRVMRGKGWNVRESVVKMTDGQGNRRAKDQSEIEHMEFLEKVPGLVSNQM 518

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLA 459
                 RAL +++ ++ + +RY  +  PW L K   T+P   D    V+Y   E +R   
Sbjct: 519 DELNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEAGTDPMAYDLLVGVIYNATESLRIAG 578

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
           ILLQ F+P+ A K+ ++L V ++
Sbjct: 579 ILLQPFMPEKAKKLLNMLGVEED 601


>gi|149371072|ref|ZP_01890667.1| methionyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355858|gb|EDM44416.1| methionyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 690

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 139/553 (25%), Positives = 250/553 (45%), Gaps = 45/553 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M++ ++  I+ A+ Y N   HIGH A   + AD+ ARF RL G DV F  G+DEHG  I 
Sbjct: 1   MQDPKRYTITAALPYTNGPVHIGHLAGVYVPADIYARFQRLQGKDVAFVCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+     +   +   +S+D++ RT+ K HHDT    +KK+ D+G  
Sbjct: 61  IKAKKEGITPQQVVDKYHAIIKQSFEDFGVSFDNYSRTSAKVHHDTASDFFKKLYDEGKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +      Y    + +  D  V             G   +     HN    +        
Sbjct: 121 IEEVTEQLYDAEADQFLADRFVIGTCPKCGNEESYGDQCEACGTSHNATDLINPKSAITG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L  Y+  L  +     +         +  S++  GL+  +++R   
Sbjct: 181 AVPTLKETKHWFLPLDQYEPFLKEWILKEHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T      +G   + +        LH IGKD 
Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISATKEWAEKEGKDWEPYWKSDDTKLLHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+         +P  V ++ F+  +G KIS S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPSMLKADGTYIMPDNVPANEFLNLEGNKISTSKNWAVWLHEYLEDFPGQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R   +  K YDG++P P AF+
Sbjct: 360 LRYTLTANAPETKDNDFTWADFQARNNNELVAIFGNFINRVTVLTHKYYDGVVPAPAAFS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + DE  L+        I  +++      A  +++++    ++Y   ++PW+  K + +R 
Sbjct: 420 DVDEQTLTELKTYPAVIESSIERYRFREAQQELMNVARLGNKYLADEEPWKTIKVDEERT 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSL---DQRLKPGF 497
            T++YV +++   LA+L + F+P  + K+ ++L V+    + +  +  +   ++ + PG 
Sbjct: 480 KTIMYVALQIANALAVLSEPFLPFTSTKLKNMLNVSLSAVEGSLTWSDISTKEELIAPGH 539

Query: 498 MLHKTFDPIFPRF 510
            ++K  + +F + 
Sbjct: 540 TINKN-ELLFSKI 551


>gi|111220457|ref|YP_711251.1| methionyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111147989|emb|CAJ59655.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (partial)
           [Frankia alni ACN14a]
          Length = 503

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 184/518 (35%), Positives = 273/518 (52%), Gaps = 34/518 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + +++TAI Y N +PH+GHA E++  D  AR  R  G +V   TGTD++  K  + A+  
Sbjct: 3   RYFVTTAIPYVNGKPHVGHALELVETDAFARHLRARGDEVRCQTGTDDNALKNVQGAEAE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+T   +V++ +  F  + + L +S+DDFI+T T+ RH      LW   +++GD Y+  Y
Sbjct: 63  GITPAEYVERVAARFISLREPLSLSFDDFIKTSTDPRHRPGVEKLWAACAERGDFYRKSY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G Y +  E +Y+ DE+  G               +EE  +FFRLS YQD+L     +  
Sbjct: 123 AGLYCVGCELFYSPDELVDG----RCPEHGTVPDLVEESNWFFRLSRYQDQLHELISTDR 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             I P  R+ EV+SF+++GL+D S SR   +   WGI +P DP  ++YVW DAL NY+T 
Sbjct: 179 LRIEPATRKREVLSFIEAGLEDFSASRSMSRARGWGIPVPGDPDQVIYVWFDALGNYITA 238

Query: 242 TGYLDNPDGSKAKFWP---ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY  +   +   +W    A +HVIGK I+RFHA+YWPA LLSA + LP  +F H ++  
Sbjct: 239 PGYGTDDA-TFQHWWNDSDARVHVIGKGIIRFHAVYWPAMLLSAGVRLPDTIFVHEYLTA 297

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+KISKS GN  DP +++     DALR++++R++A   D  Y  + L  R N DLAN I
Sbjct: 298 DGQKISKSAGNAEDPADIVAASNTDALRWWMLRDVARSGDTDYTTERLLARANEDLANNI 357

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R+VSM+ +  DG+IP   A      ++ +V  +    I          RA   V 
Sbjct: 358 GNLVNRTVSMVKRYRDGVIPPVAADNPGAAALRAVREQAPATIDAAFTAFDFRRAAEAVT 417

Query: 419 SLVSEVDRYFDAQKPWELKKTN------PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           ++ +E +RY +A +PW+L K        P     VL   V   R+LA  L  F+P  A +
Sbjct: 418 AIGNEGNRYVEAARPWDLAKAERKEDAGPAALDAVLAELVATCRELAAHLTPFLPDAAPR 477

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I                      G        P+FPR 
Sbjct: 478 IAAQCG----------------DGGPRVADPAPVFPRL 499


>gi|59712361|ref|YP_205137.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|68565957|sp|Q5E3Z7|SYM_VIBF1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|59480462|gb|AAW86249.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 686

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 228/544 (41%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G DV F    D HG  I   
Sbjct: 3   TDPRKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I  
Sbjct: 63  AQQMGISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  +    E +  D            E   G +       ++P              
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGETNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVN+D+ N I NL SR+   I K +DG +       E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFVEPELYN 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
             ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 420 EFIAAADR----IAELYETREFGRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P+LA +    L    E   ++ + Q L     + K F  +
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLN---ETLTWEGVAQPLVA-HEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FARI 534


>gi|317146103|ref|XP_001821294.2| methionyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 574

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 274/527 (51%), Gaps = 23/527 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
           + ++  Y++T I Y NA PH+GH Y MIIAD+L R+  L G  D    TGTDEHG KI +
Sbjct: 51  EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKIQQ 110

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A + T+ F D N + F D+A   ++ Y+ FIRTTE  H  + +  W+ +  +G IY
Sbjct: 111 AALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
              + GWYS+ DE +Y   +V+       G            V+W  E  Y FRLSA+Q+
Sbjct: 171 TSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWSSETNYHFRLSAFQE 230

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWI 232
           +LL  Y++   FI P     E++  V SGL+DLS+SR      WGI +P D    +YVW+
Sbjct: 231 RLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTWGIPVPGDDTQTIYVWL 288

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  
Sbjct: 289 DALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 348

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG      EK+SKS GNV++P   ++  GVD +R+FL  +     D  YD   + +    
Sbjct: 349 HGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLAGDADYDNSYIIRDYKK 408

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQN 407
            L +GIGNLV R++          I +       A  E D     +      ++ E M++
Sbjct: 409 LLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELPAANEQDLQFEQLLRETPVKVGEQMES 468

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                AL  ++ L+ + ++Y    +PW+    +  +A  VL+   E +R   ILLQ F+P
Sbjct: 469 LNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNVAESLRIAGILLQPFMP 524

Query: 468 KLANKIFDILFVADE---NRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             + ++ D+L V       R F +        +        +FP  +
Sbjct: 525 TKSKELLDVLRVDGTRPSKRAFSAAVFGSDAEYGEGIKKTVLFPPLI 571


>gi|145638841|ref|ZP_01794449.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|145271813|gb|EDK11722.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|309750825|gb|ADO80809.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 682

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/545 (24%), Positives = 239/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 ATPVVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L + +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ D   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|78212864|ref|YP_381643.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78197323|gb|ABB35088.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 514

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 187/512 (36%), Positives = 271/512 (52%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G  Y  +  D LARF RL G  V F TG DEHGQKI + A+  
Sbjct: 2   PYTLTTPLYYVNDRPHLGSTYTTLACDALARFERLLGEKVTFVTGVDEHGQKIQRTAERQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++ +   D+ S  +RD+ +   IS D F+RTT  RH +     ++++   GDI  G  +
Sbjct: 62  QLSPQDHCDRVSSRYRDLWNQWGISDDRFVRTTNPRHLELVGEFYERVKASGDIVVGKQT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y +D      A+         P++W +EE  FFRLS YQ   +    +  +
Sbjct: 122 GWYCVDCEEYKDD---PAEAESPSCPIHRKPLEWRDEENLFFRLSRYQS-AIEELVARDD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P+ RR EV +FV  GL D S+SR    WG+ + D P +  YVW DAL  YLT     
Sbjct: 178 FIAPVSRRQEVRNFVAQGLHDFSISRVNVSWGLPVHDHPGHTFYVWFDALLGYLTALLDD 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G   + D   +  WPA +HVIGKDILRFHA++WPA  +SA LP+P+KVF HGF+  +G+K
Sbjct: 238 GEAVSLDRLASCGWPASVHVIGKDILRFHAVFWPAMCMSAGLPVPQKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPELLLERCGTDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +D  +P  GA +E+D  +    +  +  + E M       A   ++ L  
Sbjct: 358 NRTSSMARKWFDDGVPPAGAASEADHPLALKAAETISTVMEAMPQLAFKTAAESILQLAI 417

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             + + +   PW   K     A     +   +E  R + +LL   +P L+ +I   L   
Sbjct: 418 AANGHLNDTAPWSRMKEPGQEAGVAEDLFAVLETTRIVGLLLAPLLPDLSERILSQLGES 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +   N   Q    RL  G  L K   P+  R 
Sbjct: 478 LDPNNWSNQLNWGRLCSGSALPKP-TPVMQRL 508


>gi|123443000|ref|YP_001006975.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|187653900|sp|A1JTX6|SYM_YERE8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122089961|emb|CAL12818.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 675

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 139/541 (25%), Positives = 236/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  LGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHLADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPALTERTEAFLNTE---LTWDSIEQPLL-GHQINA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|229846827|ref|ZP_04466934.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810316|gb|EEP46035.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 682

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 237/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHMRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L   +      + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREDIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSDK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|238491664|ref|XP_002377069.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220697482|gb|EED53823.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 574

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 187/527 (35%), Positives = 274/527 (51%), Gaps = 23/527 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
           + ++  Y++T I Y NA PH+GH Y MIIAD+L R+  L G  D    TGTDEHG KI +
Sbjct: 51  EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKIQQ 110

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A + T+ F D N + F D+A   ++ Y+ FIRTTE  H  + +  W+ +  +G IY
Sbjct: 111 AALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
              + GWYS+ DE +Y   +V+       G            V+W  E  Y FRLSA+Q+
Sbjct: 171 TSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWSSETNYHFRLSAFQE 230

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWI 232
           +LL  Y++   FI P     E++  V SGL+DLS+SR      WGI +P D    +YVW+
Sbjct: 231 RLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTWGIPVPGDDTQTIYVWL 288

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           DAL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  
Sbjct: 289 DALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLV 348

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG      EK+SKS GNV++P   ++  GVD +R+FL  +     D  YD   + +    
Sbjct: 349 HGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLAGDADYDNSYIIRDYKK 408

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQN 407
            L +GIGNLV R++          I +       A  E D     +      ++ E M++
Sbjct: 409 LLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELPAANEQDLQFEQLLRETPVKVGEQMES 468

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                AL  ++ L+ + ++Y    +PW+    +  +A  VL+   E +R   ILLQ F+P
Sbjct: 469 LNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNVAESLRIAGILLQPFMP 524

Query: 468 KLANKIFDILFVA---DENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             + ++ D+L V       R F +        +        +FP  +
Sbjct: 525 TKSKELLDVLRVDSTRPSKRAFSAAVFGSDAEYGEGIKKTVLFPPLI 571


>gi|33303703|gb|AAP22259.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 410

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 188/410 (45%), Positives = 279/410 (68%), Gaps = 8/410 (1%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           IGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +
Sbjct: 1   IGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIK 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE- 140
           ++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + + 
Sbjct: 61  ELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQL 120

Query: 141 VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           V    +G       +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE
Sbjct: 121 VDPIMEGDKVVGGKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNE 180

Query: 196 VISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           +I+   K GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    K
Sbjct: 181 MINNFIKPGLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEQMYKK 240

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           FWPAD+H++GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+
Sbjct: 241 FWPADVHLVGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPV 300

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            +I+  G+DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++
Sbjct: 301 TLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFN 360

Query: 375 GMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           G IP      TE DE++++     L+++ E M+N     AL+ +  LVS 
Sbjct: 361 GEIPAFKENVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSR 410


>gi|72382182|ref|YP_291537.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002032|gb|AAZ57834.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 516

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 186/511 (36%), Positives = 281/511 (54%), Gaps = 11/511 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+T + Y N +PH+G +Y  I  D +ARF RL+G  VLF TG DEHGQKI + A++ 
Sbjct: 4   KYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  ++  D+ +  ++ + D L+ISYD F+RTT   H       + K+    D+Y G  S
Sbjct: 64  NLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y    +V         +     ++W +EE  FF+LS YQD++         
Sbjct: 124 GWYCVGCEEY---KDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIEKLIHV-DG 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NE+I+FV  GL+D S+SR    WGI +P +  +  YVW DAL  Y++ +   
Sbjct: 180 FISPKSRKNEIINFVSKGLRDFSISRVNLKWGINVPGNKDHTFYVWFDALLGYVSGSLND 239

Query: 246 DNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   K    WPA++HVIGKDILRFHA+YWPA LLSA +  P+ VF HGF+  +G+K
Sbjct: 240 QCSPELTEKSLSNWPANIHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DPIE++E  G+DA+R++L+R+I  G+DG +        VN+DL N IGNL+
Sbjct: 300 MGKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLL 359

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K +   IP     + SD ++       + E  E+ ++     +   +I L +
Sbjct: 360 NRTITMSKKWFKENIPIDNTLS-SDSTLKVKSETKIIEYMESFKDSNFKSSANAIIDLAN 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + Y + + PW+L K   N +  +  +Y  +E  R + ILL   VP L+N+I   L + 
Sbjct: 419 SANLYLNDRAPWKLIKDISNKNIVALDIYSVLESCRIIGILLNPIVPNLSNRILKQLNID 478

Query: 481 DENRCF-QSLDQRLKPGFMLHKTFDPIFPRF 510
             N  F  SL   L       +   P+  + 
Sbjct: 479 TSNINFKDSLQWGLLDPNNGLQDPTPVMDKI 509


>gi|71119330|gb|AAH99669.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 586

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 182/540 (33%), Positives = 269/540 (49%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 37  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 97  ATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y F+LS +++ L 
Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 217 RWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY D        +WPA  H+IGKDI +FHAIYWPA LL A L  P +++ H  
Sbjct: 277 VNYLTVVGYPDA---DFKSWWPATSHIIGKDIFKFHAIYWPALLLGAGLRPPHRIYVHSH 333

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEI 401
           + +G L++R  +  +           A                  D ++++  + + + +
Sbjct: 394 DALGGLLNRCTAYRINPSGTYPSFCAACFPSEPGLTGPSVRVQAEDYALVTAVATLPKLV 453

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
                +  I++AL  V S V + + +     PW+L   +P+ A    TVL+V +E +R  
Sbjct: 454 AGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPEDAPWLGTVLHVALECLRVF 513

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FPR 
Sbjct: 514 GTLLQPVTPNLADKLLSRLGVSTTERGLGELYFLPRFYGHPCPFEGRKLGPDTGLLFPRL 573


>gi|238753408|ref|ZP_04614771.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708361|gb|EEQ00716.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 675

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 139/541 (25%), Positives = 237/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  + + S+  +       ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGVEPEQMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ + L ++  S     L  +  N++  +  SGL+   +SR    +G +
Sbjct: 186 RESEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWREDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKLADK----LADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
              +     I E   ++   RA+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 KTFTDAATSIAEAYNSRESGRAIREIMALADVANRYVDEQAPWVVAKQEGREADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L     +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPALTERTETFLNTE---LAWDSIEQPLL-DHQISA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|332176500|gb|AEE12190.1| Methionyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 683

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 239/544 (43%), Gaps = 38/544 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  IA 
Sbjct: 4   QQFKRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMKGDEVLFIGGSDEHGVPIAI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GV+ +  VD+     ++    L I +D + RTT + H  T    + K+ + G + 
Sbjct: 64  KAKAEGVSPQEVVDRYHALIKESFARLGIDFDIYSRTTSETHEKTATAFFTKLYESGKLI 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY--------YNAQHNPV--------------- 157
           +     +Y    + +  D  +       +          A    +               
Sbjct: 124 EQTSEQYYDPEAKQFLADRYITGTCPHCHNERAYGDQCEACGTSLSATDLIDPHSAISGA 183

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  E + ++  L  Y+  L  +     +   P     +  S++  GL+  +++R   D
Sbjct: 184 KPELRETKHWYLPLGDYESFLREWILEGHKEWKPNVY-GQCKSWLDLGLQPRAVTRD-LD 241

Query: 216 WGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +        ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 242 WGIPVPLQGAEGKVLYVWFDAPIGYISNTKELLPDSWRTWWCDPETRLIHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYF 328
            I +PA      +  LP  V ++ F+  +G+KIS S    I   E ++E+      LRY 
Sbjct: 302 CIIFPAMLKAEGSFNLPDNVPANEFLNLEGDKISTSRNWAIWLHEYLDEMPGKEDVLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ TE DE
Sbjct: 362 LTANAPETKDNDFTWRDYQARNNNELVAIYGNFVNRALVLTHKYFDGKVPPLGSLTEIDE 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L   + +   + + +++     AL   + L    ++Y    +PW++ K++PDR +T+L
Sbjct: 422 EMLREVAAIPAALDDQLEHFHFREALKTAMQLARIGNKYLADTEPWKVIKSDPDRVATIL 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPI 506
           ++ ++++  L+I    F P    ++  +L V +    F        L  G  L K  + +
Sbjct: 482 HLALQLVGNLSIAFAPFTPFSTRRLLAMLQVEEGGFAFSRFGATDLLPEGHQLGKP-ELL 540

Query: 507 FPRF 510
           F + 
Sbjct: 541 FEKI 544


>gi|145634394|ref|ZP_01790104.1| putative ATPase [Haemophilus influenzae PittAA]
 gi|145268374|gb|EDK08368.1| putative ATPase [Haemophilus influenzae PittAA]
          Length = 682

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 132/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L   +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ES+ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|227113133|ref|ZP_03826789.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 676

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 234/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPEM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ + L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RETEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKLADK----LADAELY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   N+   RA+ ++++L    +RY D Q PW + K     +    +  
Sbjct: 419 KTFTDAATSIAEAYNNRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDEDLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P LA +    L        + ++   L     +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLAQRTEAFLNTE---LSWDAIATPLLS-HQV-SPFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|148827028|ref|YP_001291781.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|187647724|sp|A5UF42|SYM_HAEIG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148718270|gb|ABQ99397.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 682

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 133/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L N +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ D   +RVN D+ N + NL SR+   I K ++  +         D
Sbjct: 358 YAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFESKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ES+ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|240949423|ref|ZP_04753764.1| methionyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296172|gb|EER46828.1| methionyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 687

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 242/544 (44%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MSNTRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHEVHFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  +++   +        +IS+D++  T    + +    ++KK+ + G I 
Sbjct: 61  NAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSDENRELTTAMYKKLKENGFIK 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------- 160
               S  +    + +  D            E   G + +   + ++P+  +         
Sbjct: 121 SRVISQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L A+++ L ++  S     L  E  N++  + +SGL+   +SR    
Sbjct: 181 TPIVKESEHFFFDLPAFEEMLKAWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD-----LHVIGKDILR 269
           +G  IPD      YVW+DA   Y+ +   L +  G   + FW  D      H IGKDI+ 
Sbjct: 238 FGFPIPDAENKFFYVWLDAPIGYMASFKNLCDRTGLDYQSFWQKDSTAELYHFIGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L       P  +F+HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHSLFWPAMLDGCEQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYY 357

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++    +D         +RVN+D+ N + NL SR+   I K ++G +    A +  D+
Sbjct: 358 AAKLNERIEDLDLSLTDFIQRVNSDIVNKLVNLASRNAGFIAKRFEGKL----ATSLDDQ 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++ +      ++I  + + +  ++A+  ++ L  + ++Y D + PW + K          
Sbjct: 414 ALFAEFVAQSEQIAAHYEAREFNKAIRVIMDLCDKANKYIDDKAPWVIAKEEGKEAELQA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + +E+ R L   L+  +P+LA +    L        + ++ Q L  G  +   F  +
Sbjct: 474 VCSMGIELFRILMSYLKPVLPQLAERAEAFLQ---SELRWDNIAQPLL-GHSV-APFKSL 528

Query: 507 FPRF 510
           F R 
Sbjct: 529 FTRL 532


>gi|227356723|ref|ZP_03841109.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227163231|gb|EEI48162.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 675

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 136/540 (25%), Positives = 234/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++ S+  +      +ISYD++  T  + +      ++  +   G I     S
Sbjct: 67  GITPEAMIEEMSKEHQQDFAGFNISYDNYHSTHSEENRQLSTKIYLALKKNGHIKSKTIS 126

Query: 126 GWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------WM 160
             Y      +  D  V             G + +   + ++P +                
Sbjct: 127 QLYDEEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGSTYSPTELINPRSVVSGSTPVMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E YFF L A+ + L  +  S     L  +  N++  +  SGL+   ++R    +G +I
Sbjct: 187 ETEHYFFDLPAFSNMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L    G     +FW  +      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFLNLCEKRGDLSFDEFWNKESKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++    D LRY+   ++
Sbjct: 304 FWPAVLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K +DG +    A +  D  +  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----AASLDDAKLYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
               + + I +  +N+   +A+ ++++L  E +RY D + PW + K          +  +
Sbjct: 420 HFVDMQESIAQCFENREFGKAIREIMALADEANRYIDEKAPWVVAKQEGKEAELQAICTM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  +    L        + +L Q L     + K F  +F R 
Sbjct: 480 GINLFRVLMTYLKPILPSLTERSEAFLQTE---LTWNALSQPLL-NHEITK-FKALFNRI 534


>gi|145636862|ref|ZP_01792527.1| putative ATPase [Haemophilus influenzae PittHH]
 gi|145269943|gb|EDK09881.1| putative ATPase [Haemophilus influenzae PittHH]
          Length = 682

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 132/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFASFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L   +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ES+ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|187732521|ref|YP_001879553.1| methionyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|226710924|sp|B2TVX7|SYM_SHIB3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187429513|gb|ACD08787.1| methionyl tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 677

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YRTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L     ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-DHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|332159155|ref|YP_004424434.1| methionyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034618|gb|AEC52430.1| methionyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 718

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 138/551 (25%), Positives = 257/551 (46%), Gaps = 55/551 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD+   + +       IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EGKSPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKALENGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                       P+ +
Sbjct: 123 KQAYCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ ++  + ++L  + E+          +N V+S+++ GL++ +++R   +WGI 
Sbjct: 183 RDSAHYYIKMQDFAERLKRWIENQ---HWKPNVKNMVLSWIEEGLEERAITRD-LNWGIP 238

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW------PADLHVIGKDIL 268
           +P +     ++YVW +A   Y++ T              K+W         +H IGKD +
Sbjct: 239 VPLEEMKDKVLYVWFEAPIGYISITIEYFRRIGKPNEWKKYWLNLDGQTRVIHFIGKDNI 298

Query: 269 RFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            FHAI+WPAFL+           A   LP  + ++ ++  +G K S S    I   E +E
Sbjct: 299 PFHAIFWPAFLMAYGKYKDNEVEAEWNLPYDIPANEYLTLEGRKFSTSRNWAIWVHEFLE 358

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY+L   +   +D  +     K R+N +L N +GN V R+++ + + +DG++P
Sbjct: 359 VWPADYLRYYLTTIMPETRDSDFSFADFKVRINEELVNNLGNFVHRAMTFVNRYFDGVVP 418

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G   E D+  L+   +  +E+ E + N     AL +V++L S  ++YFD ++PW+  K
Sbjct: 419 ERGELDELDKEALNEIKKTFEEVGELIMNYRFKDALKKVMNLASFGNKYFDHKQPWKTAK 478

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
            + ++ +T + +++++++ L ILL+ F+P  + KI+ +L + +  R      + ++PG  
Sbjct: 479 EDREKTATTVNISLQIVKALGILLEPFLPDASEKIWHLLNLEEVKRWE---FKEIEPGHR 535

Query: 499 LHKTFDPIFPR 509
           + K  + +F +
Sbjct: 536 VRKA-EILFKK 545


>gi|288549857|ref|ZP_05968413.2| methionine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317653|gb|EFC56591.1| methionine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 680

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGISPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++        +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSA----ELADPEL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +     I +  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAAAIGDAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+L+ +    L        + ++ Q L  G  ++ TF  ++ 
Sbjct: 482 TMGLNMFRVLMTWLKPVLPQLSARAEAFLNTE---LTWDAIQQPLL-GHKVN-TFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|220935785|ref|YP_002514684.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997095|gb|ACL73697.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 680

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 135/539 (25%), Positives = 228/539 (42%), Gaps = 45/539 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF R+ G   ++    D HG  I   A+ 
Sbjct: 12  RQILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMGGHRCIYVCADDAHGTPIMLKARA 71

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +++     R       +++D +  T    +     +++ ++ D G I +   
Sbjct: 72  EGIEPEELIERIGHEHRADFAGFHVAFDQYHSTHSPENQHFAELIYTRLRDGGHIARRTI 131

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
              Y  +   +  D  +             G   +   A + P                 
Sbjct: 132 RQAYDPKAGMFLPDRFIKGECPKCGAADQYGDSCEACGATYAPTDLKNPVSAISGATPVE 191

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L+ ++  L  +  S     L  E RN++  + K+GL D  +SR    WG +
Sbjct: 192 KESEHYFFKLADFEQFLREWTGSGS---LQPEIRNKLNEWFKAGLTDWDISRDAPYWGFE 248

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   Y +        +W  D      H IGKDI  FH +
Sbjct: 249 IPDAPGKYFYVWLDAPIGYMASFKRYCEGHGLDFDAWWSPDSQAELYHFIGKDIAYFHTL 308

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HGF+   G+K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 309 FWPAMLTGAGFRAPTAVFCHGFLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYYFAAKL 368

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D     D    RVN+DL   + N+ SR    I K ++G +    A +  D  +  
Sbjct: 369 GSGVDDIDLSLDDFIARVNSDLVGKVVNIASRCAGFIHKRFNGQL----ADSLPDADLYQ 424

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             +R   EI +  + +   +A+ ++++L    ++Y D  KPW L K     DR   V   
Sbjct: 425 RFARSRDEIAKLFEAREFGQAMREIMALADVANQYIDEHKPWVLAKQEGMEDRVQAVCTQ 484

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + + R L   L+  +P +A K    L VA     +  + + L     ++  F+P+  R
Sbjct: 485 GLNLFRVLMTYLKPVLPAMAEKAEGFLNVAP--LAWNHVAEPLLA-HRIN-PFEPLMTR 539


>gi|229845332|ref|ZP_04465464.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811785|gb|EEP47482.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 682

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 132/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L   +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ES+ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|213961726|ref|ZP_03389992.1| methionyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955515|gb|EEB66831.1| methionyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 688

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 136/546 (24%), Positives = 246/546 (45%), Gaps = 44/546 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+
Sbjct: 3   KRYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+     +       IS+D++ RT+   HH T    +KK+ ++GD  +  
Sbjct: 63  KEGTTPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEI 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
               Y      +  D  V             G   +   +  N    ++ +         
Sbjct: 123 SEQLYDEEAHQFLADRFVIGTCPKCGNPEAYGDQCERCGSSLNATDLIDPKSSITGSKPT 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F  L+ YQ+ L  +     +         +V S++   LK  +++R   DWGI
Sbjct: 183 LKATKHWFLPLNRYQEFLEKWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRD-LDWGI 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + FH
Sbjct: 242 PVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDKNTELVHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V ++ F+  +G K+S S    +   E +++     D LRY 
Sbjct: 302 CIIFPAMLKAEGSYILPTNVPANEFLNLEGNKLSTSKNWAVWLHEYLQDFPNQQDVLRYA 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R   +  K Y+G+IP  G F + D 
Sbjct: 362 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVIPAAGEFNDIDT 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + + ++I ++++      A  +++++    ++Y   ++PW+L KT+P+R  TV+
Sbjct: 422 ETLRQITELTEKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTVM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD----QRLKPGFMLHKTFD 504
           YV +++   LA+  + F+P  + K+  +L +      ++ L     + LK G  +  T +
Sbjct: 482 YVALQIATALAVASEPFLPFTSEKLKRMLQLG--AITWEDLKTNATELLKAGHRIG-TAE 538

Query: 505 PIFPRF 510
            +F + 
Sbjct: 539 LLFEKI 544


>gi|301170011|emb|CBW29615.1| methionyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 682

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 131/545 (24%), Positives = 237/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +     +      ++FW         H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFSEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ D   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|148825859|ref|YP_001290612.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|187647723|sp|A5UBS8|SYM_HAEIE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148716019|gb|ABQ98229.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 682

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 133/545 (24%), Positives = 240/545 (44%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHMRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR T 
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDTP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L N +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGVKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|89889849|ref|ZP_01201360.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7]
 gi|89518122|gb|EAS20778.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7]
          Length = 690

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 141/554 (25%), Positives = 243/554 (43%), Gaps = 46/554 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +++  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DV F  G+DEHG  I 
Sbjct: 1   MSSQQRYTITAALPYTNGPVHIGHLAGVYVPADIFARYQRMRGSDVAFICGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+  R   D      I++D + RT+   HH T    + K+ + G  
Sbjct: 61  IKAKKEGITPQELVDRYHRIIGDSFKEFGITFDHYGRTSSTEHHKTASAFFTKLYNDGKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV----------- 157
            +      Y    + +  D  V             G   +     HN             
Sbjct: 121 IEQVTEQLYDPEADQFLADRFVVGTCPKCGNTESYGDQCEKCGTSHNATDLIDPKSAITG 180

Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              +  E + +F  L  Y D L  +               +V S++  GL   +++R   
Sbjct: 181 NIPELKETKHWFLPLDEYSDWLNEWIVEGHSKDWKANVLGQVKSWITDGLHPRAVTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  +      +   +W  D    LH IGKD 
Sbjct: 240 DWGIPVPVEGADGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKKDDTKLLHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +PA      +  +P  V ++ F+  + +KIS S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPAMLKAHGDYVMPDNVPANEFLNLEDDKISTSRNWAVWLHEYLEDFPGQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN V+R + +  K Y+G++P      
Sbjct: 360 LRYVLTANAPETKDNNFTWKDFQARNNNELVANLGNFVNRVIVLTNKYYEGIVPETANLA 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ--KPWELKKTNPD 442
           + D  +L       + I +++       AL ++++L S  ++Y   +  +PW+L KTNP+
Sbjct: 420 QRDLDVLEQIKAFPKTIGDSLDRYRFREALQELMNLSSIGNKYIAEEGLEPWKLAKTNPE 479

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---VADENRCF---QSLDQRLKPG 496
           +   ++YV +++   LAIL + F+P  ++K+  +L    +  E+  +    S +  L   
Sbjct: 480 QVQNIMYVCLQLTTALAILSEPFLPHTSSKLKSMLGYSLLDAESASWIRVASSEALLPSN 539

Query: 497 FMLHKTFDPIFPRF 510
             ++K  + +F R 
Sbjct: 540 HKINKA-ELLFSRI 552


>gi|225011284|ref|ZP_03701741.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004594|gb|EEG42559.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 689

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 136/548 (24%), Positives = 240/548 (43%), Gaps = 41/548 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E  +  I+ A+ Y N   HIGH A   + AD+ +R+ R  G DV F  G+DEHG  I+ 
Sbjct: 5   SEASRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRGIGKDVAFVCGSDEHGVAISM 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K  +D+             I++D + RT+ + HH T    +KK+       
Sbjct: 65  KAKKEGITPKEVIDKYHAMISKSFIDFGITFDHYSRTSGEMHHKTASDFFKKLHQDQAFI 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM--------- 160
           +      +    E +  D  V             G   +   +  N  + +         
Sbjct: 125 EEITPQLFDPEAEQFLADRFVTGTCPKCGNEEAYGDQCESCGSSLNATELINPKSTLSGA 184

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + +F  L  Y+  L  +     +         +  S+++ GLK  +++R   D
Sbjct: 185 IPILKETKHWFLPLDKYESFLRKWILEGHKKDWKPNVYGQCKSWIEEGLKPRAVTRD-LD 243

Query: 216 WGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           WGI +P       ++YVW DA   Y++ T      +    + +  D     +H IGKD +
Sbjct: 244 WGIPVPVPGGEGKVLYVWFDAPIGYISATKEWAAKNNKDWEPYWKDENTKLVHFIGKDNI 303

Query: 269 RFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +PA      +  LP+ V ++ F+  +G+K+S S    +   E +E      D L
Sbjct: 304 VFHCIIFPAMLKAHGDYILPENVPANEFLNLEGQKLSTSKNWAVWLHEYLEAFPDQQDVL 363

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L   +GN ++R V +  K Y G +P+PG    
Sbjct: 364 RYTLTANAPESKDNDFTWKDFQARNNNELVAILGNFINRGVVLTQKYYQGKVPSPGHLEA 423

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   L+        I  +++      A   ++ +    ++Y    +PW+L KT+P R  
Sbjct: 424 IDLETLAALKEFPATIANSLEKYRFREASGILMQVARLGNKYLADNEPWKLIKTDPKRVE 483

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHKT 502
           T++YV++++   LA+L + F+P  ANK+ ++L +A  N  ++ + ++   L  G ++++ 
Sbjct: 484 TIMYVSLQIAAALAVLSEPFLPFTANKLNEMLHLAPLNLSWKDVAEKEALLPSGHIINEA 543

Query: 503 FDPIFPRF 510
              +F R 
Sbjct: 544 -QLLFRRI 550


>gi|298207410|ref|YP_003715589.1| methionyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850046|gb|EAP87914.1| methionyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 690

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 140/553 (25%), Positives = 239/553 (43%), Gaps = 45/553 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DVLF  G+DEHG  I 
Sbjct: 1   MTTPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGEDVLFVCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +   +   IS+D++ RT+ K HHDT    ++ +      
Sbjct: 61  IKAKKEGVTPQDVVDKYHTIIKKSFEDFGISFDNYSRTSAKIHHDTASEFFENLYKNDKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +      Y      +  D            E   G   +     HN    +        
Sbjct: 121 IEEVTEQLYDPGANQFLADRFVVGTCPKCGNEESYGDQCESCGTSHNATDLINPKSAISG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L  Y+D L  +     +         +  S++  GL+  +++R   
Sbjct: 181 AKPILKETKHWFLPLDQYEDYLKDWILKDHKKDWKTNVYGQCKSWIDDGLRPRAVTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y++ T       G   + +  +     LH IGKD 
Sbjct: 240 DWGIPVPVKGADGKVLYVWFDAPIGYISATKEWAQAKGKDWEPYWKNEDTKLLHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+      +  +P  V ++ F+  +G K+S S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPSMLKAEGSYIMPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPGQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L    GN ++R V +  K Y G +P P  ++
Sbjct: 360 LRYALTANAPETKDNDFTWADFQARNNNELVAVFGNFINRVVVLTNKYYGGDVPEPSTYS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE  L+        I  +++      A   ++ +    ++Y   ++PW+  KT+ +R 
Sbjct: 420 EIDEQTLTELKTYPDVIASSLERYRFREAQKLLMDVARLGNKYLADEEPWKTAKTDAERT 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV----ADENRCFQSLDQR---LKPGF 497
            TV+YV +++   LA L + F+P  +NK+ DIL +    + E   +  +  +   L  G 
Sbjct: 480 KTVMYVALQIAAALATLSEPFLPFTSNKLKDILNLTSQDSAEKNSWNDISSKNALLPAGH 539

Query: 498 MLHKTFDPIFPRF 510
            ++K  + +F + 
Sbjct: 540 QINKA-ELLFSKI 551


>gi|308802976|ref|XP_003078801.1| methionyl-tRNA synthetase of possible bacterial origi (ISS)
           [Ostreococcus tauri]
 gi|116057254|emb|CAL51681.1| methionyl-tRNA synthetase of possible bacterial origi (ISS)
           [Ostreococcus tauri]
          Length = 700

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 200/509 (39%), Positives = 280/509 (55%), Gaps = 24/509 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++TAI Y N  PH+GHAYE +  DVLAR+HR  G  VLF TG+DEHGQKIA+AA+ 
Sbjct: 25  ETFSVTTAINYANGAPHMGHAYESVSTDVLARYHRAYGRKVLFQTGSDEHGQKIAEAAEV 84

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV    FVD +   FR + + L +S D + RTT + H   C  L+++  D GDIY   Y
Sbjct: 85  AGVAPLAFVDGHVEEFRKLNERLSVSNDVYNRTTSEAHKKACAELFRRSRDNGDIYLDTY 144

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++R+E +  + E    A G         ++ M+EE YFF+ S YQ +L+++ ESHP
Sbjct: 145 EGWYNVREETFVTESEAQ--ASGYKDPVSGKDLKKMKEESYFFKQSRYQAQLIAHIESHP 202

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  RRNE++       L+DLS+SR TFDWGI +PD P+++MYVW DALTNYLT TG
Sbjct: 203 EFIQPSSRRNEILARLQNDELRDLSVSRTTFDWGIPVPDAPKHVMYVWFDALTNYLTGTG 262

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           +    +  K  FWPA +H+IGKDI+ FH + WP  L SA L LPK VF HGF+    G+K
Sbjct: 263 W--PEETDKKDFWPASVHIIGKDIIWFHCVIWPCMLWSAGLQLPKTVFGHGFVTAEDGQK 320

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP  V+E+   D  RY+L+R    G D  + +  +    NADLA+ IGNLV
Sbjct: 321 MSKSIGNVVDPNVVLEKFSSDTFRYYLMRCGVYGSDIPFSEAAMVSIHNADLADVIGNLV 380

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++  K   G++P        D         V       M    I  A    I  V 
Sbjct: 381 HRVTNLCNKSCGGVVPDCATEDIFD------VLAVRARSEAAMAKFNIQAACEAAIEAVK 434

Query: 423 EVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y     PW +K     +R + ++  T+E +      LQ ++P     I++      
Sbjct: 435 ATNKYLTDAAPWAVKGEGAEERKAVIIRSTIEAVYVSMHFLQPYIPTACEAIWE------ 488

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                +   + +  G  +    D +F +F
Sbjct: 489 ----LKPFGENVATGAKVTH-GDILFAKF 512


>gi|291391982|ref|XP_002712314.1| PREDICTED: methionine-tRNA synthetase 2 [Oryctolagus cuniculus]
          Length = 612

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 187/542 (34%), Positives = 274/542 (50%), Gaps = 42/542 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL          +TGTDEHG KI +AA
Sbjct: 63  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSATATRLSTGTDEHGLKIQQAA 122

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     +S  DFIRTTE RH    +  W+ +  +G +YKG
Sbjct: 123 ATAGLAPIELCDRVSSQFQQLFQEAGVSSTDFIRTTEARHRLAVQHFWEVLKARGLLYKG 182

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS +Q+ L 
Sbjct: 183 LYEGWYCASDECFLPEAKVTRQPGPSGESCPVSLESGHPVSWTKEENYIFRLSQFQEPLR 242

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +   +P+ I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 243 QWLRGNPQTITPEPFYHAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 302

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY ++       +WPA  H+IGKDIL+FHAIYWPA LL A L  P ++  H  
Sbjct: 303 VNYLTVIGYPND---EFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLSPPHRICVHSH 359

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   +E   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 360 WTVCGQKMSKSLGNVVDPRTCLEHYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 419

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +                 PG           D +++   + + +++
Sbjct: 420 DALGGLLNRCTANRINPSGTYPAFCTTCFPSEPGLMGPSVRARAEDYALVRAVATLPKQV 479

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   NP  A    TVL+V +E +R  
Sbjct: 480 ADHFDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWENPADAPWLGTVLHVALECLRVF 539

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP---GFMLH---KTFDP----IFP 508
             LLQ   P LA+K+   L V+   R    L  R  P   G       +   P    +FP
Sbjct: 540 GTLLQPVTPNLADKLLSRLGVSATERSLGKL--RFLPRFYGHPCPFEGRRLGPETGLLFP 597

Query: 509 RF 510
           R 
Sbjct: 598 RL 599


>gi|305665495|ref|YP_003861782.1| methionyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710251|gb|EAR02483.1| methionyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 698

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 144/548 (26%), Positives = 248/548 (45%), Gaps = 48/548 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K   +  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV F  G+DEHG  I+
Sbjct: 5   IKSPARYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRLIGKDVAFVCGSDEHGVAIS 64

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T K  +D+     +       I++D++ RT+ K HH T    + K+ ++GD 
Sbjct: 65  MKAKKEGITPKDVIDKYHAIIKKSFVDFGITFDNYSRTSAKIHHKTASDFFVKLHEQGDF 124

Query: 120 YKGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQ---------------- 158
            +   +  Y    + +  D          G +  Y +   N                   
Sbjct: 125 IEETTAQLYDEEAQQFLADRFVIGTCPKCGNEEAYGDQCENCGSSLNATDLINPKSTITG 184

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L  Y+D L  +     +         +  S++  GLK  +++R   
Sbjct: 185 AIPTLKETKHWFLPLDRYEDFLKEWILKGHKKDWKPNVYGQCKSWIDDGLKPRAVTRD-L 243

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y+++T      +G   + +  D     LH IGKD 
Sbjct: 244 DWGIPVPVKGGEGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDKDTKLLHFIGKDN 303

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+      +  LP+ V ++ F+  +G K+S S    +   E +EE     D 
Sbjct: 304 IVFHCIIFPSILKAQGDYILPENVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPDMQDV 363

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +L   +GN ++R V +  K YDG++P P  F+
Sbjct: 364 LRYTLTANAPETKDNDFTWKDFQARNNNELVAILGNFINRVVVLTNKYYDGVVPEPSNFS 423

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + DE  L+   R  + I  +++      A  ++++L    ++Y   ++PW++ K + +R 
Sbjct: 424 KVDEETLAELKRYPEIISGSIERYRFREASQELMNLARLGNKYLADEEPWKVIKEDAERV 483

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-----DENRCFQSL------DQRL 493
            T++YV +++   L++L + F+P  ++K+  IL V+      ENR   S       +  L
Sbjct: 484 QTIMYVALQIATGLSVLCEPFLPFTSDKLKRILNVSSSDSTSENRIENSWTDVSSKEALL 543

Query: 494 KPGFMLHK 501
             G  + K
Sbjct: 544 PAGHQIGK 551


>gi|197284543|ref|YP_002150415.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|226710913|sp|B4ESY6|SYM_PROMH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194682030|emb|CAR41525.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 675

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 136/540 (25%), Positives = 233/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++ S+  +      +ISYD++  T  + +      ++  +   G I     S
Sbjct: 67  GITPEAMIEEMSKEHQQDFAGFNISYDNYHSTHSEENRQLSTKIYLALKKNGHIKSKTIS 126

Query: 126 GWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------WM 160
             Y      +  D  V             G + +   + ++P +                
Sbjct: 127 QLYDEEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGSTYSPTELINPRSVVSGSTPVMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E YFF L A+ + L  +  S     L  +  N++  +  SGL+   ++R    +G +I
Sbjct: 187 ETEHYFFDLPAFSNMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L    G     +FW  +      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFLNLCEKRGDLSFDEFWNKESKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++    D LRY+   ++
Sbjct: 304 FWPAVLEGSEYRKPTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K +DG +    A    D  +  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----AANLDDAKLYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
               + + I +  +N+   +A+ ++++L  E +RY D + PW + K          +  +
Sbjct: 420 HFVDMQESIAQCFENREFGKAIREIMALADEANRYIDEKAPWVVAKQEGKEAELQAICTM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  +    L        + +L Q L     + K F  +F R 
Sbjct: 480 GINLFRVLMTYLKPILPSLTERSEAFLQTE---LTWNALSQPLL-NHEITK-FKALFNRI 534


>gi|46143801|ref|ZP_00133908.2| COG0143: Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126207836|ref|YP_001053061.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126096628|gb|ABN73456.1| methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 675

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 237/538 (44%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKADHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +    + +  D            E   G + +   + ++P+  +              E
Sbjct: 121 LFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAISGATPIVKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G  IP
Sbjct: 181 SEHFFFDLPNFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+++W
Sbjct: 238 DAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNE 357

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +  
Sbjct: 358 RIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFAEF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  + +
Sbjct: 414 IAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 474 ELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 526


>gi|330997427|ref|ZP_08321278.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570801|gb|EGG52517.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 679

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 240/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+  +  +D  +   IS+D + RTT + H +T    ++ + DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHKIIKDSFEEFGISFDVYGRTTSEVHCETASEFFRTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FVEKTSMQYYDEEAHTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++   L  +              +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDKHEAW-LRQWILEDHKEWRNNVYGQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLRDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K YDG++P  G  TE 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTQKYYDGVVPACGELTEY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L     V  ++ E +       A  + ++L    ++Y    +PW++ KT+P+R  T
Sbjct: 419 DRQTLDEFKDVKAKVEELLDAFKFRDAQKEAMNLARIGNKYIADSEPWKVVKTDPERVKT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V+Y+++++   LAI  + F+P  + K+  +L +             L+ G  L K  + +
Sbjct: 479 VIYISLQLTANLAIAFEPFLPFSSEKLRKMLNMESFEWNQLGRTDLLQAGHRLAKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|82777409|ref|YP_403758.1| methionyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123769585|sp|Q32EI8|SYM_SHIDS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81241557|gb|ABB62267.1| methionine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 677

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KQILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++     K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNSAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|319896964|ref|YP_004135159.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432468|emb|CBY80824.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 684

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 131/545 (24%), Positives = 239/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L + +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ETLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|311272846|ref|XP_003133611.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 593

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 181/511 (35%), Positives = 265/511 (51%), Gaps = 30/511 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R HRL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVSSAAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +    DIS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHQLAVQHFWGVLKTRGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEV--YKGADGQYYN---AQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V    G  G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P+ I P      V+ ++   L DLS+SR+     WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGDPQAITPEPFHRAVLQWLDEELPDLSVSRRRSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVIGYPNA---EFQSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGIPSWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +                 PG           D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSGTYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPIDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LLQ   P+LA+K+   L V+   R  + L
Sbjct: 521 GTLLQPVTPRLADKLLSRLGVSATERGLREL 551


>gi|226226140|ref|YP_002760246.1| methionyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089331|dbj|BAH37776.1| methionyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 515

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 194/518 (37%), Positives = 283/518 (54%), Gaps = 27/518 (5%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y++TAI Y N  PH+GHA E I ADV+AR+ RL G DV    G DEHGQK+ + A   
Sbjct: 3   RFYLTTAIDYANGDPHLGHALEKIGADVIARYRRLCGDDVHLLIGMDEHGQKVQQTAAKE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK--GDIYKGC 123
           GV  + F D  +  F+ M   L ISYD FIRTTE  H    + L ++I+++   D Y+  
Sbjct: 63  GVAPQAFTDTIAARFQGMWSRLGISYDQFIRTTEAHHKLGVQTLIRRIAERNPDDFYERS 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+G Y +  E++  D ++    DG+        ++ +EE  +FFRLS YQ  L     S+
Sbjct: 123 YTGMYCVGCESFKQDADIV---DGKCVLHPTRTLEEVEERNWFFRLSKYQGFLQDLLASN 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK----IPDDPQYIMYVWIDALTNYL 239
           P FI P  RRNE++  +  GL+D+S SR   DW +     + +      YVW DAL NYL
Sbjct: 180 PSFIEPSSRRNEILGLLAQGLEDISASRARLDWAVPFPLVLSNGETQGTYVWFDALPNYL 239

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T TG+ D       + WPADLH+IGKDI RFH + WPA L +A LPLPK+V++HGF+   
Sbjct: 240 TATGFPDEGY---DQRWPADLHIIGKDITRFHVVIWPAMLQAAGLPLPKQVWAHGFVQLG 296

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GE+ SKS G  +D  E I+  GVDA RY L+RE+    DG +  +  ++R  ADLAN  G
Sbjct: 297 GERFSKSAGVKLDLGEAIDRFGVDAFRYVLLREVPFDGDGNFSWERFEERYTADLANAFG 356

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQ 416
           NL SR+++M+ K +DG++PT               +  + E    M       +H  LA 
Sbjct: 357 NLASRAMAMVEKYFDGVVPTAAMPEAEQGD-----AEEIAEYHRAMHGENGWQLHEGLAA 411

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA---ILLQAFVPKLANKI 473
           V  L +  + +  A  PW + K +  R + +  +   +IR++A   +LL  F+P+ + ++
Sbjct: 412 VGRLTARANEFTAATAPWTVAK-DESRRAELEVILASLIRRIARQTVLLVPFMPEKSAQL 470

Query: 474 FDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPR 509
           + +L    E     F  L+      + + K  DP+FPR
Sbjct: 471 WRMLGAPGEVSAQRFDQLESLDVSAWQVRK-GDPLFPR 507


>gi|167753846|ref|ZP_02425973.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216]
 gi|167658471|gb|EDS02601.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216]
          Length = 680

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 241/543 (44%), Gaps = 39/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   I +D+  R+ RL G DV+   G+DEHG  I  
Sbjct: 3   KPFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLKGYDVISVCGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+  +  +   + L +S+D + RT+ K H  T    ++K+ D+G   
Sbjct: 63  KARKEGVTPQQIVDRYHQLIKSSFEGLGMSFDIYSRTSSKTHAATASEFFRKLYDEGKFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------- 162
           +     +Y    + +  D  +             G   +   +  +P + +         
Sbjct: 123 ERTSEQYYDEETQTFLADRYIVGTCPRCGNDRAYGDQCEKCGSTLSPDELINPHSAVSGS 182

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + ++  L  Y+  L  +     +         +  S++  GL+  ++SR   D
Sbjct: 183 VPVKRATKHWYLPLDQYEGFLREWILEGHKEWK-TNVYGQCKSWLDGGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHA 272
           WGI +P +     ++YVW DA   Y++ T  L        K      +H IGKD + FH 
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISATKDLTPDWEKYWKDEETKMVHFIGKDNIVFHC 300

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFL 329
           I +PA         LP+ V ++ F+  +GEKIS S    +   E + +       LRY L
Sbjct: 301 IVFPAMLKAHGGYILPENVPANEFLNLEGEKISTSRNWAVWLHEYLADFPGKEDVLRYVL 360

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  KD  +     + R N +L   +GN V+R++ +  K +DG +P  GA T+ D  
Sbjct: 361 CANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTHKYFDGAVPACGALTDYDRE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            L   S   + +  N++N     AL + +++    ++Y    +PW+L KT+P+R  T+L 
Sbjct: 421 TLRELSGAKEALENNIENYRFREALKEAMNIARLGNKYLADTEPWKLIKTDPERVKTILN 480

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIF 507
           + +++   L+I ++ F+P  A KI  +L        ++ L     L  G  + +    +F
Sbjct: 481 IALQITANLSIAIEPFMPFSAKKIVGMLQAGP--FGWEKLGSTDLLAAGHRIGEAVL-LF 537

Query: 508 PRF 510
            + 
Sbjct: 538 EKI 540


>gi|238919212|ref|YP_002932727.1| methionyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868781|gb|ACR68492.1| methionyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 682

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 133/541 (24%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 11  RKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T  + +H    +++ ++ + G I     
Sbjct: 71  MGIAPEQMIAEVSKEHQQDFADFQISYDNYHSTHSEENHQLASLIYTRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 131 SQLYDPEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPIL 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L ++   L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 191 RESEHFFFDLPSFGAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFW-----PADLHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G      +W         H IGKDI+ FH+
Sbjct: 248 IPDAPGKYFYVWLDAPIGYMGSFRNLCDKRGDLNFDDYWGQGSDAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  D LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYTAK 367

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +      T +D ++ 
Sbjct: 368 LSDRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFAGQLSD----TLADPALY 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                   EI +  + +   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 424 QTFVDAAAEIAKAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + ++ + L  G  ++  F  +F R
Sbjct: 484 MGLNLFRVLMTYLKPVLPALSARTEAFLNAE---LRWDAIAEPLL-GHRVN-PFKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|145332859|ref|NP_001078295.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
          Length = 533

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 177/454 (38%), Positives = 256/454 (56%), Gaps = 6/454 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA 
Sbjct: 65  VDEGETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIAT 124

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A   G       D  S+++R +   LDI+YD FIRTT+ +H    +  + ++   GDIY
Sbjct: 125 SAAANGRNPPEHCDLISQSYRTLWKDLDIAYDKFIRTTDPKHEAIVKEFYARVFANGDIY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  Y G Y +  E Y ++ E+    +         P    +E+ YFF LS YQ  L    
Sbjct: 185 RADYEGLYCVNCEEYKDEKELL---ENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDIL 241

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
             +P F+ P  R NEV S++KSGL+D S+SR   DWGI +PDD +  +YVW DAL  Y++
Sbjct: 242 AQNPRFVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPDDDKQTIYVWFDALLGYIS 301

Query: 241 TTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                +     +   +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ 
Sbjct: 302 ALTEDNKQQNLETAVSFGWPASLHLIGKDILRFHAVYWPAMLMSAGLELPKMVFGHGFLT 361

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+ KSLGN ++P E++++ G DA+RYF +RE+  G DG Y +D   K VNA LAN 
Sbjct: 362 KDGMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANT 421

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNL++R++ ++ K+ +  +            +     +++++ R N +N  +  A   V
Sbjct: 422 IGNLLNRTLGLLKKNCESTLVVDSTVAAEGVPLKDTVEKLVEKARTNYENLSLSSACEAV 481

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           + + +  + Y D + PW L K     A     V 
Sbjct: 482 LEIGNAGNTYMDQRAPWFLFKQGGVSAEEAAKVL 515


>gi|307260824|ref|ZP_07542510.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306869391|gb|EFN01182.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 675

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 132/538 (24%), Positives = 238/538 (44%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHIADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +    + +  D            E   G + +   + ++P+  +              E
Sbjct: 121 LFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  IP
Sbjct: 181 SEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+++W
Sbjct: 238 DAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNE 357

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ +  
Sbjct: 358 RIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADQLEDEALFAEF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K          V  + +
Sbjct: 414 IAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 474 ELFRVLMSYLKPVLPQLAERAEAFL---KTELTWDNIQQPLL--GQNVAPFKSLFSRL 526


>gi|307245178|ref|ZP_07527269.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307254125|ref|ZP_07535970.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258589|ref|ZP_07540324.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306853822|gb|EFM86036.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306862825|gb|EFM94774.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867246|gb|EFM99099.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 675

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 132/538 (24%), Positives = 238/538 (44%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHIADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +    + +  D            E   G + +   + ++P+  +              E
Sbjct: 121 LFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  IP
Sbjct: 181 SEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+++W
Sbjct: 238 DAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNE 357

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     +   +RVN+D+ N + NL SR+ S I K ++G +    A    DE++ +  
Sbjct: 358 RIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKL----ADQLEDEALFAEF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K          V  + +
Sbjct: 414 IAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 474 ELFRVLMSYLKPVLPQLAERAEAFL---KTELTWDNIQQPLL--GQNVAPFKSLFSRL 526


>gi|206581116|ref|YP_002237459.1| methionyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|226710907|sp|B5XP89|SYM_KLEP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|206570174|gb|ACI11950.1| methionyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 677

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSSAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E   ++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L         F  ++ 
Sbjct: 479 TMGLNMFRVLMTWLKPVLPQLAARAEAFLN---SELSWDAIQQPLLA--HKVNPFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|14590837|ref|NP_142909.1| methionyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|7388278|sp|O58721|SYM_PYRHO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3257407|dbj|BAA30090.1| 723aa long hypothetical methionyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 723

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 142/553 (25%), Positives = 255/553 (46%), Gaps = 57/553 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD+   + +       IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EGRSPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQQFFLKAYENGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                       P+ +
Sbjct: 123 KQAYCEHDKMFLPDRFVIGTCPFCGAENQRGDQCEVCGRPLTPEILINPRCALCGRPISF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E   Y+ ++  + +KL  + E+ P        +N V+ +++ GL++ +++R   +WGI 
Sbjct: 183 RESAHYYIKMQDFAEKLKRWIENQPWK---PNVKNMVLKWIEEGLEERAITRD-LNWGIP 238

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T              K+W         +H IGKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISITMEYFKRLGKPNEWKKYWLNIDSETRVIHFIGKD 298

Query: 267 ILRFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL+           A   LP  + ++ ++  +G+K S S    I   E 
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K R+N +L N +GN V R+++ + + +DG+
Sbjct: 359 LDVFPADYLRYYLTTIMPETRDSDFSFAEFKTRINEELVNNLGNFVHRAMTFVNRYFDGI 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D   L    +  +E+ E + N     AL +V+ L S  ++YFD ++PW+ 
Sbjct: 419 VPERGELDELDRQALEEIEKAFEEVGELIMNYRFKDALKRVMELASFGNKYFDHKQPWKT 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            K +  R  T + +++++++ L ILL+ F+P  + KI+ +L + DE + ++   + L  G
Sbjct: 479 AKEDRARTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNL-DEVKKWK--FKELPAG 535

Query: 497 FMLHKTFDPIFPR 509
             + K  + +F +
Sbjct: 536 HRVRKA-EILFKK 547


>gi|271499792|ref|YP_003332817.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343347|gb|ACZ76112.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 676

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 136/540 (25%), Positives = 234/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     S
Sbjct: 67  GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------WM 160
             +      +  D  V             G + +   A ++P +                
Sbjct: 127 QLFDPEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A+ D L  +  S     L  +  N++  +  +GL+   ++R    +G ++
Sbjct: 187 ESEHFFFDLPAFSDMLQGWTRSGA---LQEQVANKMQEWFDAGLQQWDITRDAPYFGFEV 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     +  +  D LRY+   ++
Sbjct: 304 FWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLRHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A + +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----ADSLADPALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                   I E   ++   +A+ ++++L    +RY D Q PW + K          +  +
Sbjct: 420 TFIDAAHTIAEAYSSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L+ +    L        + SL Q L        TF  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPSLSERAEAFLQTE---LSWDSLSQPLT--NHRVGTFKALFNRI 534


>gi|253687680|ref|YP_003016870.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511560|sp|C6DCI4|SYM_PECCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|251754258|gb|ACT12334.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 676

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEDMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPEM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ + L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RDTEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A T +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKL----ADTLADAELY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   ++   RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAAASIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P LA +    L        + ++   L     +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLAQRTEAFLNTE---LSWDAITTPLL-NHQV-SPFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|293349795|ref|XP_001066991.2| PREDICTED: rCG22562-like [Rattus norvegicus]
 gi|293361682|ref|XP_237156.4| PREDICTED: rCG22562-like [Rattus norvegicus]
 gi|149046149|gb|EDL99042.1| rCG22562 [Rattus norvegicus]
          Length = 586

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 182/540 (33%), Positives = 267/540 (49%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD---VLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 37  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSGSTRFSTGTDEHGLKIQQAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F  +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 97  ATAGLAPIELCDRVSAQFLQLFREAGISSTDFIRTTEARHRVAVQHFWGVLEARGLLYKG 156

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y F+LS +++ L 
Sbjct: 157 IYEGWYCASDECFLPEAKVTRQVGPSGDPCPVSLESGHPVSWTKEENYIFKLSQFREPLQ 216

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +  ++P+ I P      V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 217 RWLRNNPQAITPEPFHQVVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 276

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY D        +WPA  H+IGKDIL+FHAIYWPA LL A L  P ++  H  
Sbjct: 277 VNYLTVVGYPDA---DFKSWWPATSHIIGKDILKFHAIYWPALLLGAGLRPPHRICVHSH 333

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 334 WTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 393

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEI 401
           + +G L++R  +  +           A                  D ++++  + + + +
Sbjct: 394 DALGGLLNRCTAYRINPSGTYPSFCAACFPSEPGLMGPSVRVQAEDYALVNAVATLPKLV 453

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
                +  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 454 AGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLTWESPADAPWLGTVLHVALECLRVF 513

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FPR 
Sbjct: 514 GTLLQPVTPNLADKLLSRLGVSTTERSLGELYFLPRFYGHPCPFEGRKLGPDTGLLFPRL 573


>gi|152971099|ref|YP_001336208.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|290508587|ref|ZP_06547958.1| methionyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|187647731|sp|A6TBK7|SYM_KLEP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150955948|gb|ABR77978.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|289777981|gb|EFD85978.1| methionyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 677

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E   ++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L         F  ++ 
Sbjct: 479 TMGLNMFRVLMTWLKPVLPQLAARAEAFLN---SELSWDAIQQPLLA--HKVNPFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|238895686|ref|YP_002920421.1| methionyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|288934383|ref|YP_003438442.1| methionyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238548003|dbj|BAH64354.1| methionyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|288889112|gb|ADC57430.1| methionyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 680

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E   ++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L         F  ++ 
Sbjct: 482 TMGLNMFRVLMTWLKPVLPQLAARAEAFLN---SELSWDAIQQPLLA--HKVNPFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|307251899|ref|ZP_07533800.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306860591|gb|EFM92603.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 678

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 238/538 (44%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +    + +  D            E   G + +   + ++P+  +              E
Sbjct: 121 LFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  IP
Sbjct: 181 SEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+++W
Sbjct: 238 DAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNE 357

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +  
Sbjct: 358 RIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFAEF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  + +
Sbjct: 414 IAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 474 ELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 526


>gi|262040134|ref|ZP_06013387.1| methionine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042487|gb|EEW43505.1| methionine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 680

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +  +A ++P + ++            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E   ++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L         F  ++ 
Sbjct: 482 TMGLNMFRVLMTWLKPVLPQLAARAEAFLN---SELSWDAIQQPLLA--HKVNPFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|307247346|ref|ZP_07529394.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307249570|ref|ZP_07531557.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307262950|ref|ZP_07544572.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|306856190|gb|EFM88345.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306858425|gb|EFM90494.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306871576|gb|EFN03298.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 678

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 238/538 (44%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +    + +  D            E   G + +   + ++P+  +              E
Sbjct: 121 LFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  IP
Sbjct: 181 SEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+++W
Sbjct: 238 DAENKFFYVWLDAPIGYMASFKNLCDRTGLNFDEFWKKDSETELYHFIGKDIVYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNE 357

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +  
Sbjct: 358 RIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADK----LEDEALFAEF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  + +
Sbjct: 414 IAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 474 ELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 526


>gi|145633270|ref|ZP_01789001.1| putative ATPase [Haemophilus influenzae 3655]
 gi|144986116|gb|EDJ92706.1| putative ATPase [Haemophilus influenzae 3655]
          Length = 682

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 133/545 (24%), Positives = 239/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEKLIAKAKADHVRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 ATPVVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L N +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFTHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ D   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ETLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKDAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|301156172|emb|CBW15643.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 682

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+  KG I
Sbjct: 61  LNADKLGITPEELIAKAKADHVRDFAGFNISFDNYHSTHSEENKQLTADIYNKLKTKGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KTKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 ATPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +     +       +FW  +      H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWGENSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSEFRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFITKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTVQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQTE---LTWNNIAQPLL-GHQLT-PFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|227326675|ref|ZP_03830699.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 676

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 132/541 (24%), Positives = 234/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPEM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ + L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RETEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGKLADK----LADAELY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   ++   RA+ ++++L    +RY D Q PW + K     +    +  
Sbjct: 419 KTFTDAATSIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDEDLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + ++   L     +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLSQRTEAFLNTE---LSWDAIATPLLS-HQV-SPFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|311747941|ref|ZP_07721726.1| methionine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126574911|gb|EAZ79269.1| methionine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 686

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 140/535 (26%), Positives = 241/535 (45%), Gaps = 39/535 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I++A+ Y N   HIGH A   + +D+  R+ R  G DVL+  G+DEHG  I   A+
Sbjct: 7   KRYTITSALPYANGPLHIGHLAGCYVPSDIYVRYLRSLGKDVLYVCGSDEHGVAITIKAK 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  VDQ     +       IS+D + RT+ K HH+T +  +K + DKG+  +  
Sbjct: 67  KEGKTPQQVVDQYHEIMKGSFQEFGISFDHYSRTSAKIHHETAQGFFKDLYDKGEFLEQS 126

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------------ 160
              ++      +  D  +             G   +   +  +P   +            
Sbjct: 127 TEQYFDEEAGQFLADRYIEGTCPKCGNENAYGDQCEKCGSSLSPTDLIKPKSKLSGRTPV 186

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDW 216
             E + +F  L+ YQ  L  +               +  S+++   GL+  S++R   DW
Sbjct: 187 LKETKHWFLDLARYQSFLKKWIIEDHADDWKNNVLGQCRSWLEAGDGLQARSMTRD-LDW 245

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           GIK+P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + 
Sbjct: 246 GIKVPLNDAEGKVLYVWFDAPIGYISSTKEWAAENGKDWEPYWKDEDTKLVHFIGKDNIV 305

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA         LP  V ++ F+  +GEKIS S    +   E +EE     D LR
Sbjct: 306 FHCIIFPAILKTHGGYVLPDNVPANEFLNLEGEKISTSRNWAVWLHEYLEEFPGKQDVLR 365

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N++L    GN V+R+V +  K ++ +IP  G  T  
Sbjct: 366 YVLTANAPETKDNDFTWKDFQGRNNSELVAIYGNFVNRAVVLTKKYFNDVIPERGELTGY 425

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           DE +L   +   ++I  +++      AL  V+ L    ++Y    +PW++ KT+  R  T
Sbjct: 426 DEEVLEALAGFPEKIASSIERYRFREALGIVMDLARLGNKYLADTEPWKVIKTDEARTGT 485

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +L + + +   LAI+ + F+P  ANK+ ++  + +         + +K G +L +
Sbjct: 486 ILNIALNIAANLAIVSEPFLPFTANKLKELFGMDEFKWEESGQPELVKAGTVLGE 540


>gi|294635538|ref|ZP_06714018.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091107|gb|EFE23668.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 682

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 232/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 11  RKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   SR  +       ISYD++  T  + +     +++ ++ + G I     
Sbjct: 71  MGIAPEQMIADVSREHQHDFADFQISYDNYHSTHSEENRQLASLIYTRLKENGFIKNRTI 130

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 131 SQLYDPEKGMFLPDRFVKGTCPKCQSADQYGDNCEVCGATYSPTELINPKSVVSGATPIL 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+   L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 191 RESEHFFFDLPAFGAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G      +W  +      H IGKDI+ FH+
Sbjct: 248 IPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLSFDAYWSKESDAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  D LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPSNVFVHGYVTVNGAKMSKSRGTFIQARTYLNHLDPDCLRYYYAAK 367

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G + T    T +D ++ 
Sbjct: 368 LSARIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFAGQLST----TLADPALY 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                   EI +  + +   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 424 QTFVDAAAEIAQAYEARESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICT 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + ++   L  G  ++  F  +F R
Sbjct: 484 MGLNLFRVLMTYLKPVLPALSARSEAFLN---SELQWDAIATPLL-GHQVN-PFKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|253743531|gb|EES99896.1| Methionyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 593

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 194/558 (34%), Positives = 302/558 (54%), Gaps = 53/558 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+Y++T I Y N +PHIGH +  ++AD L RF +L G +    TGTDEHGQK+ ++A+  
Sbjct: 5   KVYLTTPIYYVNGKPHIGHVFTTLLADTLRRFRKLQGFEPYLMTGTDEHGQKVQQSAEKM 64

Query: 66  GVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  + + D  ++ F     +   +  D F+RTT   H +    LWK++ D G IYK  Y
Sbjct: 65  GLQPQQWCDNMAKTFETYFVESFGLCPDAFMRTTMPEHAEMAIKLWKRLCDAGLIYKDKY 124

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-----PVQWMEEEGYFFRLSAYQDKLLSY 179
            GWY + DEA+  +  +  G D Q    + +     P  ++ EE Y F+LS++Q+ LL +
Sbjct: 125 EGWYCVADEAFVTETNLKAGVDAQGNPCKISADSGQPCVFLSEENYKFKLSSFQEPLLKF 184

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTN 237
           Y  +P+ I+P  R+ E++SF++SGL D+S+SR      WGI +P D  ++MYVWIDALT 
Sbjct: 185 YRDNPDIIIPTFRQAEIVSFIQSGLHDISISRSKDKISWGIPVPGDSDHVMYVWIDALTI 244

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           YLT  G+  NPDG+  +  WPAD+  +GKDI RFH +YW AFL+ A +P P++ F HG+ 
Sbjct: 245 YLTAAGFTINPDGTFNSGLWPADVQFLGKDIARFHCVYWLAFLMGAGIPCPRRFFIHGWW 304

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
               +KI KSLGN +DP+ ++E  G+D+++YF++RE +   D    ++ +  RV +DLAN
Sbjct: 305 TVNHQKIGKSLGNALDPMSLVEIYGLDSVKYFMLREGSPANDPSITEELISMRVESDLAN 364

Query: 357 GIGNLVSRSVS---------------MILKDY--------DGMIPTPGAFTESDESILSV 393
            +GNL  R  +                  KD+           + +      +DES    
Sbjct: 365 VLGNLTMRCTAESLLPERVWTDPSKLFEGKDFMQIRSCWMSSRMSSIAELLPTDESKREH 424

Query: 394 CSRVLQ----------------EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            S V++                E+ + M+N  I  AL+++  +++ V+ Y     PW L 
Sbjct: 425 ISSVIKMDDVSRLLDKGFTICEEVVKLMENIDIPGALSKIFEILTGVNNYIQLTMPWSLI 484

Query: 438 KTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQR 492
           K    ++S   V+Y + E++R  A LL  F+P+ A  I D L V  E R  +        
Sbjct: 485 KKEGTKSSHEFVMYCSTELLRICATLLLPFIPQKAPLILDQLGVPAECRVIEKDVLTIGY 544

Query: 493 LKPGFMLHKTFDPIFPRF 510
           +KPG  L +   P+FP+ 
Sbjct: 545 IKPGLALGEKLPPLFPKL 562


>gi|57640984|ref|YP_183462.1| methionyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68749280|sp|Q5JDZ7|SYM_PYRKO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57159308|dbj|BAD85238.1| methionyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 741

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 150/551 (27%), Positives = 259/551 (47%), Gaps = 56/551 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G +VLF  GTDEHG  I   A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD+   + +   +   IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EGRSPREIVDEFHEHIKTTFERAKISFDFFGRTELPVHYRLSQEFFLKALENGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                  N   NP+ +
Sbjct: 123 KQAYCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGHPLTPEILINPRCNICGNPITF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ R+  ++++L  + ES   +      RN V+ ++  GL++ +++R   DWGI 
Sbjct: 183 KDSAHYYIRMQDFEERLKKWVESQEHWK--PNVRNTVLGWINEGLEERAITRD-LDWGIP 239

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T      +       KFW         +H IGKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITIEHLKREGKENEWKKFWLNLDGETKVIHFIGKD 299

Query: 267 ILRFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL+           A   LP  + ++ ++  +G+K S S    I   E 
Sbjct: 300 NIPFHAIFWPAFLMAYGKYRDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +  +  KK++N +L N +GN V R+++ + + +DG+
Sbjct: 360 LDVWPADYLRYYLTAIMPETRDSDFSFEDFKKKINEELVNNLGNFVHRAMTFVNRYFDGV 419

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   + D   L    +  +E  E + N     AL +V+ L    +RYFD QKPW+ 
Sbjct: 420 VPERGELNDLDRQALEEIEKAFKETGELISNYRFKDALKRVMELAIFGNRYFDYQKPWKT 479

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            K N +R +T + V++++++ L ILL+ F+P  + KI+ +L + +E + +    + L  G
Sbjct: 480 AKENRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNL-EEVKKWS--FEELPAG 536

Query: 497 FMLHKTFDPIF 507
             + K F P+F
Sbjct: 537 HRVRKAF-PMF 546


>gi|260435477|ref|ZP_05789447.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413351|gb|EEX06647.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 514

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 187/512 (36%), Positives = 273/512 (53%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G  Y  +  D LARF RL    V F TG DEHGQKI + A+  
Sbjct: 2   PYTLTTPLYYVNDRPHLGSTYTTLACDALARFERLQLEKVTFVTGVDEHGQKIQRTAERQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++ +   D+ S  +RD+ +   IS D F+RTT  RH +     ++++   GDI  G  +
Sbjct: 62  QLSPQDHCDKVSTRYRDLWNQWGISNDRFVRTTNPRHLELVEQFYERVKASGDIVVGKQT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y +D      A+    +    P++W +EE  FFRLS YQ   +    S  +
Sbjct: 122 GWYCVDCEEYKDD---PAEAESPSCSIHRKPLEWRDEENLFFRLSRYQS-AIEELVSRDD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P  RR EV +FV  GL+D S+SR    WG+ +PD P +  YVW DAL  YLT     
Sbjct: 178 FIAPASRRQEVRNFVAQGLRDFSISRVNVSWGLPVPDHPGHTFYVWFDALLGYLTALLDD 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G   + D   +  WPA +HVIGKDILRFHA++WPA  +SA LP+P+KVF HGF+  +G+K
Sbjct: 238 GESVSLDRLASCGWPASVHVIGKDILRFHAVFWPAMCMSAGLPVPQKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPELLLERCGSDAVRWYLLRDIQFGDDGDFQQQRFLDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +D ++P  GA + +D  +    +  +  + E M       A   ++ L  
Sbjct: 358 NRTSSMARKWFDDVVPPAGAASSADHPLALKAAETVSTVIEAMPQLAFKTAAESILQLAI 417

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             + + +   PW   K      S    +   +E  R + +LL   +P L+ +I   L   
Sbjct: 418 AANGHLNETAPWSRMKEPGQEQSVAEDLFAVLETTRIVGLLLAPLLPDLSERILSQLGER 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +N   Q    RL  G  L K   P+  R 
Sbjct: 478 LDPDNWLKQLNWGRLCSGSALPKP-TPVMQRL 508


>gi|254507772|ref|ZP_05119903.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549297|gb|EED26291.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 686

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 231/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 64  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +    E +  D            E   G +       ++P + ++          
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 361 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +    +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYKEFADAADRIAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P+LA +    L    E   ++ +   L  G  + K F  +F
Sbjct: 477 CSVGINLFRVLMTYLKPVMPELAARTEAFLN---EELTWEGIAAPLT-GHEITK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|325299462|ref|YP_004259379.1| Methionyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319015|gb|ADY36906.1| Methionyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 680

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/546 (25%), Positives = 249/546 (45%), Gaps = 41/546 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +VLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEEVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G T +  VD+     RD      IS+D + RTT K HHDT    ++ + DKG+
Sbjct: 61  TIRAKKEGCTPQDIVDRYHTLIRDSFKEFGISFDVYGRTTSKVHHDTASAFFRTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +   +  +P +         
Sbjct: 121 FVEKTSMQYYDEEAKTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L+ ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMKETKHWYLPLNKHEAWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V ++ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G   + 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFEGKVPACGELNDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D + L   + V  ++ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DRATLQEFADVKAQVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFD 504
           +L + ++++  L+I  + F+P  + K+  +L +  E   ++ L     L+ G  L+K  +
Sbjct: 479 ILNIALQLVANLSIAFEPFLPFSSEKLRKMLNM--ETFSWEQLGRTDLLEAGHALNKA-E 535

Query: 505 PIFPRF 510
            +F + 
Sbjct: 536 LLFEKI 541


>gi|124025722|ref|YP_001014838.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123960790|gb|ABM75573.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 516

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 186/511 (36%), Positives = 280/511 (54%), Gaps = 11/511 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+T + Y N +PH+G +Y  I  D +ARF RL+G  VLF TG DEHGQKI + A++ 
Sbjct: 4   KYTITTPLYYVNDKPHLGSSYTTIACDAIARFERLNGNTVLFLTGVDEHGQKIERTAESK 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  ++  D+ +  ++ + D L+ISYD F+RTT   H       + K+    D+Y G  S
Sbjct: 64  NLEPQLHCDEITEKYKYLWDKLNISYDRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y    +V         +     ++W +EE  FF+LS YQD++         
Sbjct: 124 GWYCVGCEEY---KDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIEKLINV-DG 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI P  R+NE+I+FV  GL+D S+SR    WGIK+P +  +  YVW DAL  Y++ +   
Sbjct: 180 FISPKSRKNEIINFVSKGLRDFSISRVNLKWGIKVPGNKDHTFYVWFDALLGYVSGSLND 239

Query: 246 DNPDGSKAK---FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                   K    WPA+ HVIGKDILRFHA+YWPA LLSA +  P+ VF HGF+  +G+K
Sbjct: 240 QCSPELTEKSLCNWPANRHVIGKDILRFHAVYWPAMLLSAGMKTPRSVFGHGFLTREGQK 299

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DPIE++E  G+DA+R++L+R+I  G+DG +        VN+DL N IGNL+
Sbjct: 300 MGKSLGNVLDPIELLEYGGIDAMRWYLLRDIEFGEDGDFQMRRFVDIVNSDLCNTIGNLL 359

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+++M  K +   IP     + SD ++       + E  E+ ++     +   +I L +
Sbjct: 360 NRTITMSKKWFKENIPIDNTAS-SDSTLKVQSETKIIEYMESFKDSNFKSSANAIIDLAN 418

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + Y + + PW+L K   N +  +  +Y  +E  R + ILL   VP L+ +I   L + 
Sbjct: 419 SANLYLNDRAPWKLIKDISNKNVVALDIYSVLESCRIIGILLNPIVPNLSTRILKQLNID 478

Query: 481 DENRCF-QSLDQRLKPGFMLHKTFDPIFPRF 510
             N  F  SL   L       +   P+  + 
Sbjct: 479 TSNINFKDSLQWGLLDPNNRLQDPTPVMDKI 509


>gi|261822290|ref|YP_003260396.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606303|gb|ACX88789.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 676

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 133/541 (24%), Positives = 234/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAAEQYGDNCEVCGATYSPTELIEPKSAVSGATPEM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +         D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGKLADK----LVDPDLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   ++   RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAAASIAEAYNSRESGRAIREIMALADIANRYVDEQAPWVVAKAEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P LA +    L        + ++   L     ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLAQRTEAFLNTE---LSWDAIATPLL-NHQVN-PFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|218131529|ref|ZP_03460333.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697]
 gi|217986461|gb|EEC52798.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697]
          Length = 680

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 242/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEAWLRQWILDDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGTVPAAGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+  R +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMSRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +   +         L  G  L    + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHQLAAP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|312883697|ref|ZP_07743421.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368670|gb|EFP96198.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 686

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 227/541 (41%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     
Sbjct: 71  MGLTPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE----------- 162
           S  +    E +  D            E   G +       ++P + +E            
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATPIM 190

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLQEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRSDLDFEEYWRKDSTAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLEHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K +DG +       E    + 
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGQLSATCNEPE----LY 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 424 REFASAADNIAELYETREFSRAIREITALADKANQYVDEKAPWVVAKEEGKEQELQNICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + + L   L+  +P LA +    L    +   +  L   L+    + K F  +F R
Sbjct: 484 VGINLFKVLMTYLKPVMPALAARTEAFLN---KELTWSDLSTPLES-HKITK-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|254172601|ref|ZP_04879276.1| methionyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033530|gb|EEB74357.1| methionyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 739

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/551 (26%), Positives = 252/551 (45%), Gaps = 57/551 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G +VLF  GTDEHG  I   A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD+   + +   +   IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EGRSPREIVDEFHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                  N   NP+ +
Sbjct: 123 KQAYCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGRPLTPEILINPRCNICGNPITF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ ++  ++++L  + ES          +N V+ ++  GL++ +++R   DWGI 
Sbjct: 183 KDSAHYYIKMQDFEERLKKWVESQ---HWKPNVKNTVLGWINEGLEERAITRD-LDWGIP 238

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGY---LDNPDGSKAKFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T         +    KFW          H IGKD
Sbjct: 239 VPLDDEDVKGKVLYVWFEAPIGYISITIEALKRAGKEKEWKKFWLNLDGETKVTHFIGKD 298

Query: 267 ILRFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL+           A   LP  + ++ ++  +G+K S S    I   E 
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG+
Sbjct: 359 LDAFPADYLRYYLTAIMPETRDSDFSFADFKVKINEELVNNLGNFVHRALTFVNRYFDGI 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D+       R  +E+ E +       AL +V+ L    +RYFD Q+PW+ 
Sbjct: 419 VPERGELNELDKQAFEEIERAFEEVGELISQYRFKDALRRVMELAIFGNRYFDHQRPWKT 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            KT+ +R +T + V++++++ L ILL+ F+P  + KI+ +L + +  R        +  G
Sbjct: 479 AKTDRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEELKRWE---FTEIPAG 535

Query: 497 FMLHKTFDPIF 507
             + K   P+F
Sbjct: 536 HRVRKA-TPMF 545


>gi|240103568|ref|YP_002959877.1| methionyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911122|gb|ACS34013.1| Methionyl-tRNA synthetase (metG) [Thermococcus gammatolerans EJ3]
          Length = 739

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 142/551 (25%), Positives = 251/551 (45%), Gaps = 57/551 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G +VLF  GTDEHG  I   A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD+   + +   +   IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EGRSPREIVDEFHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                  N   NP+ +
Sbjct: 123 KQAYCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGRPLTPEILINPRCNICGNPITF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ ++  ++++L  +             +N V+ ++  GL++ +++R   DWGI 
Sbjct: 183 KDSAHYYIKMQDFEERLKKWI---ESRPWKPNVKNTVLGWINEGLEERAITRD-LDWGIP 238

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGY---LDNPDGSKAKFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T         +    KFW         +H IGKD
Sbjct: 239 VPLDDEDMRGKVLYVWFEAPIGYISITIEALKRAGKEKEWKKFWLNLEGETRVIHFIGKD 298

Query: 267 ILRFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL+           A+  LP  + ++ ++  +G+K S S    I   E 
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEADWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG+
Sbjct: 359 LDAFPADYLRYYLTAIMPETRDSDFSFADFKVKINEELVNNLGNFVHRALTFVNRYFDGI 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D+       R  +E+ E +       AL +V+ L    +RYFD Q+PW+ 
Sbjct: 419 VPERGELNELDKQAFEEIERAFEEVGELISQYRFKDALRRVMELAIFGNRYFDHQRPWKT 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            KT+  R +T + V++++++ L ILL+ F+P  + KI+ +L + +  R        +  G
Sbjct: 479 AKTDRKRTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEELKRWE---FTEIPAG 535

Query: 497 FMLHKTFDPIF 507
             + K   P+F
Sbjct: 536 HRVRKA-TPMF 545


>gi|319776160|ref|YP_004138648.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123331|ref|ZP_08251896.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
 gi|317450751|emb|CBY86971.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471331|gb|EGF16783.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
          Length = 682

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 131/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 ATPVVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L + +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ETLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA      L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAEHAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|294899809|ref|XP_002776754.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239883955|gb|EER08570.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1046

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 184/501 (36%), Positives = 293/501 (58%), Gaps = 16/501 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK YI+TAI Y N   HIGHAYE + AD LAR++R+ G DV F TGTDEHGQKIA+ A
Sbjct: 160 DAEKYYITTAINYTNGWAHIGHAYEAVAADALARWNRVYGRDVEFCTGTDEHGQKIAQKA 219

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           ++ G T +   D  +  F+ +   L IS D +IRTT++ H  TC+ LW+ +S KGDIY  
Sbjct: 220 ESKGKTPQEICDIYASAFQALNQRLRISNDIYIRTTDEHHMKTCQKLWEIVSSKGDIYLD 279

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+G+Y +R+E Y  D E  +        +   P+  M EE YFFR+  YQ +L+ + +S
Sbjct: 280 NYTGYYLVREERYVTDAEAKEWD--YKDPSTGKPLTEMSEESYFFRMGRYQQRLVDHIKS 337

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           HP+FI P + R ++++ ++  L+DLS SR+TF WGI IP    ++MYVW DALTNYL+  
Sbjct: 338 HPDFIKPEQYRQQILARLEEPLRDLSCSRRTFSWGIPIPGSDDHVMYVWFDALTNYLSA- 396

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH-GFILHKGE 301
             ++  D  K  +WPA+ H+IGKDI+ FH + WP  L+SA++PLP+ V  H      +G+
Sbjct: 397 --VNGLDSDKPHYWPANAHIIGKDIIWFHCVIWPCMLMSADIPLPESVAVHGFIQDAEGK 454

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS+GNV+DP +V+++  VD +R++++ +   G D  +    +    NADL NG+GNL
Sbjct: 455 KMSKSIGNVVDPHDVLDKFPVDTVRWYMLSDAPYGGDLKFSTAAMINTHNADLCNGLGNL 514

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V+R++++      G      +  + ++       + + ++   M+ Q  I    A +  +
Sbjct: 515 VNRAIAL-----SGGCVPEFSVKDLEKPF--DLRKTIDDLDATMRQQDAISEGCAIIRQV 567

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               + +    +PW++ K + ++   ++ + +E +  LA L   F+P  A+KIF+ L  A
Sbjct: 568 TGATNEWITRVEPWKI-KDDKEKRMAIIRLLMESVYVLAHLWAPFIPMGADKIFEKLATA 626

Query: 481 DEN-RCFQSLDQRLKPGFMLH 500
               +      + L+PG  + 
Sbjct: 627 PRPLKDLSETFENLEPGHPIP 647


>gi|288560216|ref|YP_003423702.1| methionyl-tRNA synthetase MetG [Methanobrevibacter ruminantium M1]
 gi|288542926|gb|ADC46810.1| methionyl-tRNA synthetase MetG [Methanobrevibacter ruminantium M1]
          Length = 691

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 146/534 (27%), Positives = 254/534 (47%), Gaps = 34/534 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++IS A+ Y N   H+GH     I AD+ AR++R+ G DVL    TDEHG  IA  A  
Sbjct: 3   KIFISCALPYANGPCHLGHLRSTYIPADIYARYNRMAGNDVLMVCATDEHGTPIAVKADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G        +         +  DIS D+F RT+++ H+   +  +  + +KG IY+   
Sbjct: 63  EGKKPIEVAKRYHDMIARDIESCDISLDNFARTSDELHYKISQDFFLYLYEKGLIYEEAI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWME---------------- 161
              Y    E +  D  V            G +  +    ++  E                
Sbjct: 123 QQLYCENCEKFLPDRYVEGICPVCGAEARGDHCESCGRALEPTELLEPHCLTCGNTPVIR 182

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LS +Q++L  Y  ++    LP   RN   +++K GL+D  ++R    WGI +
Sbjct: 183 DSTQYFFKLSHFQNQLEEYITTNE--YLPPNVRNYAQNWLKEGLEDWIMTRD-MKWGIPV 239

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWP 276
           P +     ++YVW +A   Y+++        G   + +     +H IGKDI+  H+++WP
Sbjct: 240 PLEGAKGKVIYVWGEAFIGYISSAAAWSRRTGIPWEDYWDGHVVHFIGKDIIYHHSLFWP 299

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A L+  +  LP  +F+  F+  +G K+S S   V+   + +++   D LR++L       
Sbjct: 300 AMLMGHDCKLPDDIFAGEFLSLEGRKMSTSKNWVVWVSDFVKDFESDLLRFYLTISAPLN 359

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  +  D   +RVN +LA+ IGN + R+ +   K +DG +P     +E D    +    
Sbjct: 360 KDTDFSWDDFGRRVNDELADIIGNFLHRTFTFTHKFFDGKVPEYANPSEEDLEFEAEIKE 419

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +  ++ E + +      L +++      ++YF+ Q+PW+  K NP +AS  LY++ +  +
Sbjct: 420 LPAKVGELISSMKFREGLVEILKTAKSANKYFNDQEPWKAVKENPQKASNCLYLSNQFCK 479

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            LAILL+ ++P  A+ I DI+ ++ EN  +      L+ G  ++K   P+F + 
Sbjct: 480 SLAILLKPYIPNKADAICDIINISKEN-VWDDASIFLENGHEINKA-KPLFKKI 531


>gi|302801510|ref|XP_002982511.1| hypothetical protein SELMODRAFT_155208 [Selaginella moellendorffii]
 gi|300149610|gb|EFJ16264.1| hypothetical protein SELMODRAFT_155208 [Selaginella moellendorffii]
          Length = 509

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 183/499 (36%), Positives = 263/499 (52%), Gaps = 14/499 (2%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +G AY  I AD  ARF RL G +V+F TGTDEHG+KIA AA   G   K   D  +  + 
Sbjct: 1   MGSAYPTIAADAFARFQRLQGRNVVFVTGTDEHGEKIATAAAAKGRKPKEHCDLIANEYA 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +   L+ISYD FIRTT++ H       +K++ DKGDIY   Y G Y +  E Y +  ++
Sbjct: 61  SLWKDLNISYDKFIRTTDEAHERAVEQFYKRVYDKGDIYCANYEGLYCVNCEEYKDAKDL 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               + Q       P    +E+ YFF LS YQ +L     + P+F+ P  R NEV+ +VK
Sbjct: 121 I---EEQCCPIHRKPCVERKEKNYFFALSKYQSRLEELLSTRPDFVRPPFRMNEVLGWVK 177

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD 259
            GL D S+SR+  +WGI +P D +  +YVW DAL  Y++            A    WPA 
Sbjct: 178 EGLHDFSISREAVEWGIPVPTDKKQTIYVWFDALLGYISALLDGKEVTPENAAASGWPAS 237

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H+IGKDILRFHA+YWPA L SA   +P+ VF HGF+   G K+ KSLGN I+P E++  
Sbjct: 238 VHIIGKDILRFHAVYWPAMLWSAGFAIPETVFGHGFLTKDGLKMGKSLGNTIEPQELVSR 297

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            GVD++RYF + E+  G+DG Y ++     VNA LAN IGNL++R++ ++ K+    IP 
Sbjct: 298 FGVDSVRYFFLNEMEFGRDGDYSEERFITIVNAHLANTIGNLLNRTLGLLKKNCASTIPV 357

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                  +  +       +   +          A   ++SL +  + Y + + PW   K 
Sbjct: 358 DSESIPEENPVRVFAEAAVALAKRRYSELHFSSACEALLSLANTGNAYLEERAPWTGFKQ 417

Query: 440 NP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD----Q 491
                 + A+  L V +E +R L++ L   VP L  +++  L   DE+    S D     
Sbjct: 418 KGTPAAEAAAKDLAVILESVRILSVALSPVVPDLCRRMWLQLGYQDEHFNQISWDDTRWG 477

Query: 492 RLKPGFMLHKTFDPIFPRF 510
            LK G  L  T  P+FP+ 
Sbjct: 478 GLKAG-QLVATPSPVFPKI 495


>gi|317474804|ref|ZP_07934078.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
 gi|316909485|gb|EFV31165.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
          Length = 680

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 242/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEAWLRQWILDDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGTVPAAGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+  R +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMSRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +   +         L  G  L    + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHQLAAP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|330013408|ref|ZP_08307631.1| methionine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328533523|gb|EGF60248.1| methionine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 670

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 242/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      DISYD++  T    + +   +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + ++            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVL----AAELADPAL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E   ++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P+LA +    L        + ++ Q L         F  ++ 
Sbjct: 482 TMGLNMFRVLMTWLKPVLPQLAARAEAFLN---SELSWDAIQQPLLA--HKVNPFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|145257023|ref|XP_001401591.1| methionyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134058501|emb|CAL00710.1| unnamed protein product [Aspergillus niger]
          Length = 575

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 187/526 (35%), Positives = 278/526 (52%), Gaps = 23/526 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
            ++  Y++T I Y NA PH+GH Y M++ADV+ R+  L G  D    TGTDEHG KI +A
Sbjct: 53  SKKPYYVTTPIFYVNAAPHVGHLYTMVLADVIKRWRTLIGDADAQLLTGTDEHGMKIQQA 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A + T+ F D N + F  +A+  ++ Y+ FIRTTE  H +  +  W+ +  +G +Y 
Sbjct: 113 ALAAEMDTQAFCDMNYKTFEALANAANMDYNYFIRTTEPAHKEAVQYFWEVLEHRGYVYT 172

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y   +V K      G            V+W  E  Y FRLSA+Q++
Sbjct: 173 AKHEGWYSVSDETFYPQTQVQKSLDPETGHTKMVSIETGKEVEWSSETNYHFRLSAFQER 232

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL  Y++   FI P      V+  V  GL+DLS+SR      WGI +P D    +YVW+D
Sbjct: 233 LLDLYKTG--FITPTMYTTNVVKSVSEGLQDLSISRPAERLTWGIPVPGDNTQTVYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  H
Sbjct: 291 ALVNYLTKAGYPFAPGQGSHLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVH 350

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G      EK+SKS GNV++P   I   GVD++R+FL+ + A   D  YD   + +     
Sbjct: 351 GHWTMNREKMSKSTGNVVNPFFAINRFGVDSMRFFLIHQGALVGDADYDNAYIIRDYQKL 410

Query: 354 LANGIGNLVSRSVSMILKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           L  G+GNL  R++     +      +G        T +DE+  ++   V + I E M+N 
Sbjct: 411 LQKGLGNLAHRAIGCAKGNLRTYIENGTCGRLPPATPADEAYETMLKDVPKRIAEQMENL 470

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
               AL ++ +L+ + ++YF   +PW   K+  DR  ++  V  E +R   ILLQ  +P 
Sbjct: 471 NPRAALQEITTLIDQTNKYFHHAEPW---KSPNDRQRSIFNVA-ESLRMAGILLQPVMPT 526

Query: 469 LANKIFDILFV---ADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            AN++ D+  V       R + +        + +      +FP  +
Sbjct: 527 KANELLDMFHVDRTDPAKRSYAAATYGSDADYGVDAKKSILFPPLI 572


>gi|307256395|ref|ZP_07538177.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865025|gb|EFM96926.1| Methionyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 678

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 238/538 (44%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A   G
Sbjct: 1   MLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLNAAKQG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +++   +        +IS+D++  T  + + +    ++KK+   G I     S 
Sbjct: 61  ITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENREITTEMYKKLRANGFIKSRVISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +    + +  D            E   G + +   + ++P+  +              E
Sbjct: 121 LFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L +++  L  +  S     L  E  N++  + +SGL+   +SR    +G  IP
Sbjct: 181 SEHFFFDLPSFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+++W
Sbjct: 238 DAENKFFYVWLDAPIGYMASFKNLCDRNGLNFDEFWKKDSETELYHFIGKDIVYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L    L  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+   ++  
Sbjct: 298 PAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNE 357

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     +   +RVN+D+ N + NL SR+ S I K ++G +         DE++ +  
Sbjct: 358 RIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKCFEGKLADK----LEDEALFAEF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I  + +N+  ++A+  ++ L  + ++Y D + PW + K      +   V  + +
Sbjct: 414 IAQSEQIAAHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGCDAQLQAVCSMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           E+ R L   L+  +P+LA +    L        + ++ Q L         F  +F R 
Sbjct: 474 ELFRVLMSYLKPVLPQLAERAEAFLQTE---LTWDNIQQPLL--GQNVAPFKSLFSRL 526


>gi|161511054|ref|NP_798448.2| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879483|ref|ZP_05891838.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898218|ref|ZP_05906714.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260903217|ref|ZP_05911612.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|61252102|sp|Q87N07|SYM_VIBPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|308088382|gb|EFO38077.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093540|gb|EFO43235.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106544|gb|EFO44084.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 688

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 230/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     
Sbjct: 71  MGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 428 AAADR----IAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P LA +    L    +   ++ + Q L  G  + K F  +F R
Sbjct: 484 VGINLFRVLMTYLKPVMPALAARTEAFLN---QELTWEGIAQPLT-GHEITK-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|228473672|ref|ZP_04058422.1| methionine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274886|gb|EEK13701.1| methionine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 690

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 130/547 (23%), Positives = 247/547 (45%), Gaps = 43/547 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+
Sbjct: 3   ERYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+ ++  +D      IS+D++ RT+   H+ T    ++ + DKGD  +  
Sbjct: 63  KEGTTPQEIIDKYNKIIKDSLFDFGISFDNYSRTSLPIHYQTASEFFRTLYDKGDFIEET 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
               Y  +   +  D  V             G   +      N    +  +         
Sbjct: 123 SEQLYDEQAGQFLADRFVIGTCPKCGNEEAYGDQCERCGTSLNATDLINPKSTLTGSKPV 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F  L  Y + L  +     +         +V S++  GL+  +++R   DWGI
Sbjct: 183 LRQTKHWFLPLQDYTEFLEKWIIEGHKNDWKPNVYGQVKSWIDDGLRPRAVTRD-LDWGI 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + FH
Sbjct: 242 PVPVEGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDKKTKLIHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYF 328
            I +PA      +  LP+ V ++ F+  +G K+S S    +   E +EE       LRY 
Sbjct: 302 CIIFPAMLKAEGSYILPENVPANEFLNLEGNKLSTSKNWAVWLNEYLEEFPSQQDTLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           +       KD  +     + R N +L    GN ++R + +  K Y G++P+ G  T+ D 
Sbjct: 362 ITANAPETKDNDFTWKDFQARNNNELVAIYGNFINRVMVLTDKYYKGVVPSVGELTQVDR 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            + +    ++Q+I ++++      A  +++++    ++Y   ++PW+L K +P R  T++
Sbjct: 422 EVFAQIKELIQKIEQSLERYRFREAQQELMNIARLGNKYLADEEPWKLIKEDPKRVETIM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSL---DQRLKPGFMLHKTF 503
           Y+ + +   LA+  + F+P  + K+  +L  +  ++   +Q +   D+ +  G  + ++ 
Sbjct: 482 YIALHIATALAVTSEPFLPFTSEKLKRMLNFSTMEKAPTWQDIPLSDRLIPQGHTIGESV 541

Query: 504 DPIFPRF 510
             +F + 
Sbjct: 542 L-LFEKI 547


>gi|325996303|gb|ADZ51708.1| Methionyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 538

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT++ H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMVLQDTEPLF 506


>gi|293372431|ref|ZP_06618815.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292632614|gb|EFF51208.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 679

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT   HH      +K + +KG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHSLIKESFKEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEAWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQGSLTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMDTFEWSELGKDNLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|145346067|ref|XP_001417517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577744|gb|ABO95810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 573

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 200/510 (39%), Positives = 287/510 (56%), Gaps = 15/510 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  ++TAI Y N  PH+GHAYE I  DVLAR+HR  G  VLF TG+DEHGQKIA+AA+ 
Sbjct: 74  ERFSVTTAINYANGAPHMGHAYESISTDVLARYHRAYGRQVLFQTGSDEHGQKIAEAAEE 133

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    FVD +   F+++   LD+S D + RTT + H   C  L+++  D GDIY   Y
Sbjct: 134 KGMAPLAFVDTHVAEFQNLNKRLDVSNDVYNRTTSEAHKKACAELFRRSRDNGDIYLDTY 193

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY++R+E +  + E    A G         ++ M+EE YFF+ S YQ +L+++ ES+P
Sbjct: 194 EGWYNVREETFVTESEAQ--ASGYKDPVSGKDLKKMKEESYFFKQSRYQKQLIAHIESNP 251

Query: 185 EFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           EFI P  RRNE++       L+DLS+SR TFDWGI +PD P+++MYVW DALTNYLT TG
Sbjct: 252 EFIQPSSRRNEILARLQNDDLRDLSVSRTTFDWGIPVPDAPKHVMYVWFDALTNYLTGTG 311

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           +    +     FWPA +H+IGKDI+ FH + WP  L SA LPLPK VF HGF+    G+K
Sbjct: 312 W--PEETENKDFWPASVHIIGKDIIWFHCVIWPCMLWSAGLPLPKTVFGHGFVTADDGQK 369

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP +V++    D  RY+L+R    G D  + +  +    NADLA+ IGNLV
Sbjct: 370 MSKSIGNVVDPNDVLKRFSSDTFRYYLMRCGVYGADVPFSEPAMIAIHNADLADVIGNLV 429

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++  K+  G+IP   +              +  +    M    I  A    I  + 
Sbjct: 430 HRVTNLCKKNCGGIIPDCASENVF------SVGVLRAKSEAAMSRFNIQGACELAIEAIK 483

Query: 423 EVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y     PW +K     +R S ++  T+E +      LQ +VPK    +F+ L V  
Sbjct: 484 CTNKYLTDSAPWAVKGEGAEERKSVIIKSTLEAVYVAMHFLQPYVPKACGLVFEKLGVPA 543

Query: 482 -ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +    +   + +  G  +    D +F +F
Sbjct: 544 VKIWELKPFGENVPIGATV-AIGDVLFAKF 572


>gi|261253533|ref|ZP_05946106.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936924|gb|EEX92913.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 686

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 232/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   
Sbjct: 3   TDPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE-------- 162
              S  +    E +  D            E   G +       ++P + ++         
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGAT 182

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLQEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGEKNKFFYVWLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLSANFAEPE--- 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          
Sbjct: 417 -LYNEFAAAADRIAELFETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  V + + R L   L+  +P+LA +    L    E   ++ +   L  G  + K F  +
Sbjct: 476 ICSVGINLFRVLMTYLKPVMPELAARTEAFLN---EELTWEGVAAPLT-GHEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FNRI 534


>gi|325997892|gb|ADZ50100.1| Methionyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 538

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 298/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F++  D  ++ YD FIRTT++ H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG Y +  E+Y    +     D             +EEE YFF+LSAY+  LL +Y  +P
Sbjct: 122 SGHYCVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N   +K   +    H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGY-LNGLDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++ ++ 
Sbjct: 361 LNRLLGMAKKYFNYSL-KSAKITAYYPKELEKAHQILDNANSFVPKMQLHKALEELFNIY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     V 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNESEKLEALLSLIANTLLQSSFLLYAFMPKSAMKLASAFRVE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +  K   M+ +  +P+F
Sbjct: 480 ITPNNYERFFKAKKLQDMVLQDTEPLF 506


>gi|270295309|ref|ZP_06201510.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274556|gb|EFA20417.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 680

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 244/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   +S+D + RTT K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  +++ L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEEWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDTWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +D ++P  G   + 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAGELNDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 419 DRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L+++++++  LAI  + F+P  + K+  +L +   +         L  G  L  T + +
Sbjct: 479 ILHISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHQLG-TPELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|224537450|ref|ZP_03677989.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520976|gb|EEF90081.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 679

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 141/544 (25%), Positives = 243/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     ++      IS+D + RT+ K HHDT    ++K+ DKGD
Sbjct: 61  TIRAKKEGVTPQDIVDRYHTLIKESFKEFGISFDVYSRTSSKTHHDTASEFFRKLYDKGD 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDQHESWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDTWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG++P  G  TE 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAGELTEY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   S V  E+ + +       A  + ++L    ++Y    +PW++ KT+ DR +T
Sbjct: 419 DRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKIAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +   +         L  G  L  T + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWATLGSTNLLPAGHQL-ATPELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|167763880|ref|ZP_02436007.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC
           43183]
 gi|167697996|gb|EDS14575.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC
           43183]
          Length = 680

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 244/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEAWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +E+     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG++P  G   + 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAGELNDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   + V +E+ + +       A  + ++L    ++Y    +PW+L KT+  R +T
Sbjct: 419 DRETLKEFADVKEEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMPRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +   +         L  G  L  T + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHQL-ATPELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|160891633|ref|ZP_02072636.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492]
 gi|156859040|gb|EDO52471.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492]
          Length = 702

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 244/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 23  MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPI 82

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   +S+D + RTT K HHDT    ++K+ DKG+
Sbjct: 83  TIRAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGE 142

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 143 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 202

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  +++ L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 203 GSQPVMRETKHWYLPLDKHEEWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 260

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 261 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDTWEKWWKDPETRLVHFIGKDNIV 320

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 321 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGKQDVLR 380

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +D ++P  G   + 
Sbjct: 381 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAGELNDY 440

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 441 DRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVAT 500

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L+++++++  LAI  + F+P  + K+  +L +   +         L  G  L  T + +
Sbjct: 501 ILHISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHQLG-TPELL 559

Query: 507 FPRF 510
           F + 
Sbjct: 560 FEKI 563


>gi|293410473|ref|ZP_06654049.1| methionyl-tRNA synthetase [Escherichia coli B354]
 gi|291470941|gb|EFF13425.1| methionyl-tRNA synthetase [Escherichia coli B354]
          Length = 591

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 9   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 69  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 128

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 129 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 189 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 245

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 246 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFH 305

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 306 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKARTWLNHFDADSLRYYYTA 365

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 366 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 422 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L +      +  + Q L  G  ++  F  ++ 
Sbjct: 482 SMGINLFRVLMTYLKPVLPKLTERAEAFLNIE---LTWHGIQQPLL-GHKVN-PFKALYN 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|237744196|ref|ZP_04574677.1| methionyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431425|gb|EEO41637.1| methionyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 563

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 176/441 (39%), Positives = 265/441 (60%), Gaps = 11/441 (2%)

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
            + NF++M   L+I YDDFIRTTE RH    + +   ++ KGDIYKG Y G Y +  E +
Sbjct: 1   MTPNFKNMWAALNIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEYEGKYCISCETF 60

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + ++++               ++ ++EE YFF++S Y D LL + E HP+FILP  RRNE
Sbjct: 61  FPENQLDGSNK---CPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFILPHSRRNE 117

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           VISF+K GL+DLS+SR TF WGI I   P +I YVW DALTNY+T+ G+ ++       +
Sbjct: 118 VISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGFENDEKKFDKFW 177

Query: 256 WPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
             A + H+IGKDI+RFHAI WP  LLSA + LP  + +HG+   +GEK+SKS GNV++P 
Sbjct: 178 NNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSKSRGNVVNPY 237

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I++ GVDA RY+L+RE   G DG Y   G+  R+N+DLAN +GNL++R++ M  K ++
Sbjct: 238 DEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNLLNRTLGMYKKYFN 297

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G++         D  I S+ + V++++ + M      RAL  +   +S +++Y D   PW
Sbjct: 298 GVVVASSTTEPIDNEIKSMFNDVIKDVEKYMYLFEFSRALETIWKFISRLNKYIDETMPW 357

Query: 435 ELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
            L K  T   R +TV+ +  E + ++A L+  ++P+ A KI + L +  +  N  F  + 
Sbjct: 358 SLAKDETKKARLATVMNILCEGLYKIAFLIAPYMPESAQKISNQLGIDKDITNIKFDDIK 417

Query: 491 QR--LKPGFMLHKTFDPIFPR 509
           +    K G  L +   PIFPR
Sbjct: 418 EWHIFKAGHKLGEA-SPIFPR 437


>gi|299137612|ref|ZP_07030793.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298600253|gb|EFI56410.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 784

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 217/575 (37%), Positives = 303/575 (52%), Gaps = 76/575 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y++T I Y NA+PHIGHAY  I+ADVLAR HRL G D  F TGTDEHGQKI ++A
Sbjct: 4   NRKKFYLTTPIYYVNARPHIGHAYTTIVADVLARRHRLLGDDTFFLTGTDEHGQKIERSA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+  + F DQ S  FR++ D + ++YD +IRTT+ +H    + L+  + ++G IY  
Sbjct: 64  AVAGIAPQQFADQVSIQFRNLWDRMGLTYDRYIRTTDAKHKRGAQKLFADLYERGQIYLS 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y+G YS+ +E +        G DG        P + + EE +FFRLS YQ  LL   ES
Sbjct: 124 SYTGQYSVGEEIFVEGPPGTIGPDG-------KPTETVTEENFFFRLSEYQRPLLDLIES 176

Query: 183 HPEFILPIERRNEVIS------------------------FVKSGLKDLSLSRKTFDWGI 218
               I P  R+NEV+S                        +VK  L+DLS+SR +F WGI
Sbjct: 177 DTLAITPEARKNEVLSFLRGNVVEGRAAGLEIENSNTGAPYVKGALRDLSVSRSSFTWGI 236

Query: 219 KIP------DDPQYIMYVWIDALTNYLTTTGY---LDNPDGSKAKFWPADLHVIGKDILR 269
            +P       D +++MYVW+DAL NY+T  GY             +WPAD+H++ K+I R
Sbjct: 237 PVPEPAASATDKKHVMYVWLDALANYMTAIGYGSDDPKDTAEFNHYWPADVHIMAKEITR 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG-------- 321
            H IYWPAFLL+ANL LPK V +HG++L    K+SKS GN++    +++  G        
Sbjct: 297 QHCIYWPAFLLAANLSLPKAVTAHGWLLFDNSKMSKSKGNIVRTETILDAFGDEVYGKQF 356

Query: 322 ------------VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                        D LRYFL+REI  G+DG +  D L  R NADLANG GNLVSR++SMI
Sbjct: 357 PDSTKAERDLFASDVLRYFLLREIPFGQDGSFSFDALVTRYNADLANGYGNLVSRTLSMI 416

Query: 370 LKDYDGMIPTPGAFTE-----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            K    +     A  +     +D    S     + E+  ++       +L+++ SLV+ V
Sbjct: 417 AKRDGIIPEDKDALFDPNFMGNDVLPYSSIRATVMEVAADLDRSAFSSSLSKLWSLVTLV 476

Query: 425 DRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           D Y     PW+L     K +  +AS +LY   E IR +  +L   +P    K++  L + 
Sbjct: 477 DGYITQYAPWKLVTSDDKVDQYKASFILYSAAESIRIVTAILYPTLPTATAKVWAQLGLG 536

Query: 481 DENRCFQSLD------QRLKPGFMLHKTFDPIFPR 509
           D     ++ +        LKPG  L     PIFPR
Sbjct: 537 DIEVAARNGELNNLQWGGLKPGTKLG-PLAPIFPR 570


>gi|153806949|ref|ZP_01959617.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185]
 gi|149130069|gb|EDM21279.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185]
          Length = 679

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 238/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + +KG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEGWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGCVPAQGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMDTFEWSELGKDNLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|328474598|gb|EGF45403.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 688

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 137/541 (25%), Positives = 230/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     
Sbjct: 71  MGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   R    I E  + +   RA+ +V +L  + ++Y D + PW + K          +  
Sbjct: 428 AAADR----IAELFEAREFGRAIREVTALADKANQYVDEKAPWVVAKEEGKDQELQEICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P LA +    L    +   ++ + Q L  G  + K F  +F R
Sbjct: 484 VGINLFRVLMTYLKPVMPALAARTEAFLN---QELTWEGIAQPLT-GHEITK-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|218709003|ref|YP_002416624.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782875|sp|B7VLW8|SYM_VIBSL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218322022|emb|CAV18060.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 686

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 135/544 (24%), Positives = 230/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   
Sbjct: 3   TDPRQLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  +    E +  D            E   G +       ++P +            
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGEKDKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPE--- 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +      + I +  + +   RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 417 -LYNEFVAAAERIGQLYETREFSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P+LA +    L    E   ++++   L     + K F  +
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLN---EELTWEAIATPLT-DHEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FSRI 534


>gi|299144832|ref|ZP_07037900.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515323|gb|EFI39204.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 679

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + +KG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEAWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQGSLTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMDTFEWSELGKDNLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|237717171|ref|ZP_04547652.1| methionyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237721837|ref|ZP_04552318.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405941|ref|ZP_06082491.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647899|ref|ZP_06725451.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806294|ref|ZP_06765141.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443154|gb|EEO48945.1| methionyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229448706|gb|EEO54497.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356816|gb|EEZ05906.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292636807|gb|EFF55273.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446550|gb|EFG15170.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295085632|emb|CBK67155.1| methionyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 679

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 238/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEGWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMNTFEWSELGRDNLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|325286637|ref|YP_004262427.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322091|gb|ADY29556.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 692

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 141/541 (26%), Positives = 245/541 (45%), Gaps = 42/541 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   +  I+ A+ Y N   HIGH A   + AD+ AR+ R    DV F  G+DEHG  I+ 
Sbjct: 6   KTPSRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRGINKDVAFVCGSDEHGVAISM 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K  +D+     +       I++D++ RT+ + HHDT    +K + DKGD  
Sbjct: 66  KAKKEGITPKQVIDKYHAIIKKSFLDFGITFDNYSRTSAQVHHDTASEFFKNLYDKGDFI 125

Query: 121 KGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQ----------------- 158
           +      Y    + +  D          G +  Y +   N                    
Sbjct: 126 EETTEQLYDAEAKQFLADRFVIGTCPKCGHEEAYGDQCENCGSTLSATELINPKSTVSGA 185

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + +F  L  Y+D L  +     +         +  S++  GLK  +++R   D
Sbjct: 186 VPTLKETKHWFLPLDRYEDFLKEWILEGHKNDWKPNVYGQCKSWIDDGLKPRAVTRD-LD 244

Query: 216 WGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           WGI +P       ++YVW DA   Y+++T      +G   + +  D     LH IGKD +
Sbjct: 245 WGIPVPVPGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKMLHFIGKDNI 304

Query: 269 RFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P+      +  LP+ V ++ F+  +G K+S S    +   E +E+     D L
Sbjct: 305 VFHCIIFPSMLKAHGDFILPENVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPDMQDVL 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN ++R V +  K Y+G++PTP  F+E
Sbjct: 365 RYTLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGVLPTPATFSE 424

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D++ L    +  + I  +++      A  ++++L    ++Y   ++PW++ K + +R  
Sbjct: 425 IDKATLEEVKKYPEIISSSLERYRFREAGQELMNLARLGNKYLADEEPWKVIKQDEERVK 484

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-----ENRCFQSLDQRLKPGFMLH 500
           T++YV +++   LA+L + F+P  ++K+ +IL V+      E     + D  L  G  ++
Sbjct: 485 TIMYVALQIASALAVLSEPFLPFTSDKLKNILNVSAANNNVEWNTIATQDVLLPAGHTIN 544

Query: 501 K 501
           K
Sbjct: 545 K 545


>gi|160884208|ref|ZP_02065211.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483]
 gi|298479939|ref|ZP_06998138.1| methionine--tRNA ligase [Bacteroides sp. D22]
 gi|156110550|gb|EDO12295.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483]
 gi|298273748|gb|EFI15310.1| methionine--tRNA ligase [Bacteroides sp. D22]
          Length = 679

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 238/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT   HH      +K + DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTTSPTHHQLASDFFKTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEGWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMDTFEWSELGRDNLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|126662871|ref|ZP_01733870.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126626250|gb|EAZ96939.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 695

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 141/546 (25%), Positives = 248/546 (45%), Gaps = 43/546 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + E ++  I+ A+ Y N   HIGH A   + +D+ AR+ RL G DV F  G+DEHG  I+
Sbjct: 12  LSEAKRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLQGKDVAFVCGSDEHGVAIS 71

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+     R       IS+D++ RT+ + HH T    +KK+ D GD 
Sbjct: 72  MKARKEGITPQQVIDKYDGIIRQSFLDFGISFDNYSRTSSEIHHKTASEFFKKLYDNGDF 131

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +      Y  + + +  D  V             G   +   +  N    +  +     
Sbjct: 132 IEETTEQLYDAKADQFLADRFVTGTCPKCDNPEAYGDQCEKCGSTLNATDLINPKSTITG 191

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +F  L+ Y+  L  +     +         +V S+V  GL+  +++R   
Sbjct: 192 ETPILKSTKHWFLPLNRYESFLREWILEGHKNDWKPNVYGQVKSWVDGGLEPRAVTRD-L 250

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +      +YVW DA   Y+++T      +G   + +  D     +H IGKD 
Sbjct: 251 DWGIDVPVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDADTKLVHFIGKDN 310

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +PA      +  LP  V ++ F+  +G K+S S    +   E + +     D+
Sbjct: 311 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLLDFPEKQDS 370

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +LA   GN ++R V +  K Y+G++P P  F+
Sbjct: 371 LRYALTANAPETKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYNGIVPAPNEFS 430

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE  L+        I  +++      AL +++++    ++Y   ++PW++ K NP R 
Sbjct: 431 EVDEQTLAELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKENPARV 490

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHK 501
            T +YV +++   LA+L + F+P  A K+ +IL +  +   +  +  +   L  G  + +
Sbjct: 491 QTQMYVALQIASALAVLSEPFLPFTAKKLSNILKI--DALGWNDVTTKTDLLTAGHQIGQ 548

Query: 502 TFDPIF 507
             + +F
Sbjct: 549 A-EILF 553


>gi|258626535|ref|ZP_05721374.1| methionyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581182|gb|EEW06092.1| methionyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 729

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 50  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 110 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 169

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  Y    E +  D            E   G +       ++P +             
Sbjct: 170 TISQLYDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 229

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 230 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 286

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 287 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYF 346

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 347 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 406

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 407 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPE---- 462

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 463 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 522

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 523 CTVGINLFRVLVTYLKPVMPALAERTEAFLN---QELTWEGIATPLT--NHAVTPFKALF 577

Query: 508 PRF 510
            R 
Sbjct: 578 NRI 580


>gi|238789828|ref|ZP_04633609.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722024|gb|EEQ13683.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 675

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 234/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   ++++++   G I     
Sbjct: 66  LGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYRRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD      YVW+DA   Y+     L +  G     +FW         H IGKDI+ FH+
Sbjct: 243 VPDATGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWREGSTTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAILEGSHFRKPTNIFVHGYVTVNGAKMSKSRGTFIKASTYLKHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +        +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKLADQ----LADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAAASIAEAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKEEGRDSDLHAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHQINA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|309973006|gb|ADO96207.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 682

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 235/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +     +       +FW         H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWVEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ES+ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKSPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+   L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFHVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|153835356|ref|ZP_01988023.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868127|gb|EDL67289.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 686

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 230/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 64  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +    E +  D            E   G +       ++P + ++          
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 361 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 421 FVAAADR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    E   ++ +   L  G  + K F  +F
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAARTEAFLN---EELTWEGIAAPLT-GHEITK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|329962356|ref|ZP_08300361.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328530217|gb|EGF57098.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 680

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 139/546 (25%), Positives = 246/546 (45%), Gaps = 41/546 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT + HH+T    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKKSFEDFGISFDVYSRTTSETHHETASDFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  +++ L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEEWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K ++G++P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFNGVVPAAGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L     V  E+ + +       A  + ++L    ++Y    +PW+L KT+  R ST
Sbjct: 419 DRETLKEFEDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARVST 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFD 504
           +L ++++++  LAI  + F+P  + K+  +L +  E+  +  L     L  G  L  T +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRRMLNM--ESFDWAELGHTDLLPAGHQLG-TPE 535

Query: 505 PIFPRF 510
            +F + 
Sbjct: 536 LLFEKL 541


>gi|146298619|ref|YP_001193210.1| methionyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|187647752|sp|A5FLM7|SYM_FLAJO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146153037|gb|ABQ03891.1| methionyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 711

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 151/535 (28%), Positives = 243/535 (45%), Gaps = 38/535 (7%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M +  K Y I+ A+ Y N   HIGH A   + AD+ +R+ RL G DV F  G+DEHG  I
Sbjct: 1   MTQNPKRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLQGKDVAFICGSDEHGVAI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           +  A+  GVT +  +D+     R       IS++++ RT+ K HHDT    ++ + DKGD
Sbjct: 61  SMKAKKEGVTPQEVIDKYDGIIRKSFADFGISFNNYSRTSAKIHHDTASEFFRTLYDKGD 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------- 160
             +      Y  +   +  D  V             G   +   +  N    +       
Sbjct: 121 FIEEVTEQLYDAKANQFLADRFVVGTCPKCDNPEAYGDQCEKCGSTLNATDLINPKSTIT 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + +F  L  Y D L  +     +         +V S++  GL+  +++R  
Sbjct: 181 GETPILKETKHWFLPLDRYSDFLTKWILEGHKNDWKPNVYGQVKSWIDGGLEPRAVTRD- 239

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +      +YVW DA   Y+++T      +G   + +  D     +H IGKD
Sbjct: 240 LDWGIDVPVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDEETKLVHFIGKD 299

Query: 267 ILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VD 323
            + FH I +PA      +  LP  V ++ F+  +G K+S S    +   E +EE     D
Sbjct: 300 NIVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPDKQD 359

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L    GN V+R V +  K YDG+IPTP  F
Sbjct: 360 VLRYALTSNAPETKDNDFTWKDFQARNNNELVAIFGNFVNRVVVLTNKYYDGVIPTPNEF 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           TE DE  L+        I  +++      AL +++++    ++Y   ++PW++ K NP+R
Sbjct: 420 TEIDEQTLAELKAYPAVISSSVERYRFREALGELMNVARLGNKYLADEEPWKVMKDNPER 479

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
             T +YV +++   L++L + F+P  A K+  IL + D    F+   + LK    
Sbjct: 480 VKTQMYVALQIAAALSVLAEPFLPFTAAKLSKILNLGDLKEHFEGFSKFLKERHQ 534


>gi|317478291|ref|ZP_07937456.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316905598|gb|EFV27387.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 695

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 135/544 (24%), Positives = 244/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I
Sbjct: 16  MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKENVIFIGGSDEHGVPI 75

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   +S+D + RTT K HHDT    ++K+ DKG+
Sbjct: 76  TIRAKKEGITPQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGE 135

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 136 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 195

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  +++ L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 196 GSQPVMRETKHWYLPLDKHEEWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 253

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 254 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDTWEKWWKDPETRLVHFIGKDNIV 313

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 314 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLVDFPGKQDVLR 373

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +D ++P  G   + 
Sbjct: 374 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDSVVPAAGELNDY 433

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 434 DRETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVAT 493

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L+++++++  LAI  + F+P  + K+  +L +   +         L  G  L  T + +
Sbjct: 494 ILHISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHQLG-TPELL 552

Query: 507 FPRF 510
           F + 
Sbjct: 553 FEKI 556


>gi|251790453|ref|YP_003005174.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539074|gb|ACT07695.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 677

 Score =  349 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 135/540 (25%), Positives = 233/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     S
Sbjct: 67  GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------WM 160
             +      +  D  V             G + +   A ++P +                
Sbjct: 127 QLFDPEKSMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIDPKSAVSGATPVMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A+ D L  +  S     L  +  N++  +  SGL+   ++R    +G ++
Sbjct: 187 ESEHFFFDLPAFSDMLQGWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFEV 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWRKDASTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLKHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQLADQ----LADAALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 Q I E   ++   +A+ ++++L    +RY D Q PW + K          +  +
Sbjct: 420 TFIDAAQTIAEAYGSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  +    L        + +L Q L     +   F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPSLTERAEAFLQTE---LRWDNLAQPLT-NHRVGA-FKALFNRI 534


>gi|189465160|ref|ZP_03013945.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM
           17393]
 gi|189437434|gb|EDV06419.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM
           17393]
          Length = 679

 Score =  349 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 140/544 (25%), Positives = 244/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     ++      IS+D + RTT K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGVTPQDIVDRYHTLIKESFKEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDQHESWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDTWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSFILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG++P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   S V  E+ + +       A  + ++L    ++Y    +PW++ KT+ DR +T
Sbjct: 419 DRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKIAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+ ++L +   +         L  G  L  T + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRNMLNMDSFDWATLGSTDLLPAGHQL-ATPELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|254881246|ref|ZP_05253956.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777663|ref|ZP_06743114.1| methionine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|254834039|gb|EET14348.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448731|gb|EFG17280.1| methionine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 680

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 240/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRQMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|86147931|ref|ZP_01066235.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834256|gb|EAQ52410.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 686

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 135/544 (24%), Positives = 230/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   
Sbjct: 3   TDPRQLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  +    E +  D            E   G +       ++P +            
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGEKNKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPE--- 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +      + I +  + +   RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 417 -LYNEFVAAAERIGQLYETREFSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P+LA +    L    E   ++++   L     + K F  +
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELAARTEAFLN---EELTWEAIATPLT-DHEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FSRI 534


>gi|269962055|ref|ZP_06176409.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833139|gb|EEZ87244.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 686

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 229/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 64  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSTTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 361 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 421 FVAAADR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    E   ++ +   L  G  + K F  +F
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAARTEAFLN---EELTWEGIAAPLT-GHEITK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|163802868|ref|ZP_02196757.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173408|gb|EDP58231.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 686

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 229/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 64  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +    E +  D            E   G +       ++P + +E          
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKNKFFYVWLDAPVGYMASFKNLCNKTDGLDFDEYWKKDSSAELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 361 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +        I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYNEFVTAAGRIAELYETREFSRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L  G  + K F  +F
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAARTEAFLN---QELTWEGIAAPLT-GHEITK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|293411862|ref|ZP_06654587.1| methionyl-tRNA synthetase [Escherichia coli B354]
 gi|291469417|gb|EFF11906.1| methionyl-tRNA synthetase [Escherichia coli B354]
          Length = 616

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 28  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 87

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 88  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTI 147

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 148 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 207

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 208 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 264

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 265 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 324

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 325 SLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 384

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 385 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 440

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 441 YKTFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 500

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 501 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 555

Query: 509 RF 510
           R 
Sbjct: 556 RI 557


>gi|260173039|ref|ZP_05759451.1| methionyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315921317|ref|ZP_07917557.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695192|gb|EFS32027.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 679

 Score =  349 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 238/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +       IS+D + RTT   HH      +K + +KG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHSLIKKSFAEFGISFDVYSRTTSPTHHQLASDFFKTLYNKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEAWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G+ T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGRVPAQGSLTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMDTFEWSELGRDDLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|260641818|ref|ZP_05413598.2| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624529|gb|EEX47400.1| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 711

 Score =  349 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 238/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 33  MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 92

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RT+   HH      +K + DKG+
Sbjct: 93  TIRAKKEGITPQDVVDRYHSLIKKSFEEFGISFDVYSRTSSPTHHQLASDFFKTLYDKGE 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 153 FIEKTSEQYYDKEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 212

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 213 GSKPVMKETKHWYLPLDKHEAWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 270

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 271 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 330

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + +     D LR
Sbjct: 331 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLADFPGKQDVLR 390

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 391 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDGKVPAQGELTDY 450

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 451 DKETLKEFADVKAEVEKLLDIFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 510

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI    F+P  + K+  +L +          D  L  G  L+K  + +
Sbjct: 511 ILNISLQLVANLAIAFDPFLPFSSEKLRKMLNMDTFEWAELGKDNLLPVGHQLNKP-ELL 569

Query: 507 FPRF 510
           F + 
Sbjct: 570 FEKI 573


>gi|323498216|ref|ZP_08103218.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323316644|gb|EGA69653.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 686

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 134/544 (24%), Positives = 231/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   
Sbjct: 3   TDPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE-------- 162
              S  +    E +  D            E   G +       ++P + ++         
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGAT 182

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSSTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPE--- 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          
Sbjct: 417 -LYNEFAAAADRIAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQD 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  V + + R L   L+  +P+LA +    L    E   ++ +   L     + K F  +
Sbjct: 476 ICSVGINLFRVLMTYLKPVMPELAARTEAFLN---EELTWEGVAAPLT-DHEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FNRI 534


>gi|317011232|gb|ADU84979.1| methionyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 642

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 296/507 (58%), Gaps = 6/507 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I+T I Y N  PHIGHAY  +IAD L +++ L G +V F TGTDEHGQKI ++A+ 
Sbjct: 2   QKSLITTPIYYVNDVPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSARL 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + K + D  S  F+   D  ++ YD FIRTT+  H    +  ++ + +KGDIYKG Y
Sbjct: 62  RNQSPKAYADSISAIFKSQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG+Y +  E+Y    +                   +EEE YFFRLSAY+  LL +Y  +P
Sbjct: 122 SGYYCVSCESYCAISKTDNTEGKILCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNP 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---PDDPQYIMYVWIDALTNYLTT 241
           E ILPI R+NEV SF++ GL DLS++R +F+WGI +    +DP++++YVW+DAL NY + 
Sbjct: 182 EAILPIYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASA 241

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GYL+  +   A F  A  H++GKDILRFHAIYWPAFL+S NLPL K++  HG+   +G 
Sbjct: 242 LGYLNGLENRMAHFECAR-HIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV 300

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV+D  ++  E G++ LRYFL+RE+  G+DG + K  L +R+NA+L N +GNL
Sbjct: 301 KMSKSLGNVLDAQKLAMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLGNL 360

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R + M  K ++  +      T      L    ++L      +    +H+AL ++  + 
Sbjct: 361 LNRLLGMAKKYFNHSL-KSAKITAYYPKELEKVYQILDNANSFVPKMQLHKALEELFGVY 419

Query: 422 SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++    ++PW L K N  ++   +L +    + Q + LL AF+PK A K+     + 
Sbjct: 420 DFLNKLIAKEEPWVLHKNNELEKLEALLSLIANALLQSSFLLYAFMPKSAMKLASAFKIE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIF 507
                ++   +      M+ +  +P+F
Sbjct: 480 ITPNHYERFFKSKNLQDMILQDTEPLF 506


>gi|313157540|gb|EFR56958.1| methionine--tRNA ligase [Alistipes sp. HGB5]
          Length = 691

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 134/543 (24%), Positives = 239/543 (44%), Gaps = 39/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE ++  +++A+ Y N   HIGH A   I +D+  R+ RL G DV+   G+DEHG  I  
Sbjct: 14  KEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPITI 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   + L +S+D + RT+   H  T    ++K+ D+G   
Sbjct: 74  KARKEGVTPQQIVDRYHSMIKKSFEGLGMSFDIYSRTSSATHAKTASEFFRKLYDEGKFI 133

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +   +  +P +           
Sbjct: 134 EQTSMQYYDEETQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVSGS 193

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  Y+  L  +     +         +  S++  GL+  ++SR   D
Sbjct: 194 VPVKRETKHWYLPLDQYEGFLREWILEGHKEWK-SNVYGQCKSWLDGGLQPRAVSRD-LD 251

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHA 272
           WGI +P +     ++YVW DA   Y++ T  L     +  K      +H IGKD + FH 
Sbjct: 252 WGIPVPVEGAEGKVLYVWFDAPIGYISATKDLTPDWETYWKSEDTKMVHFIGKDNIVFHC 311

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFL 329
           I +P+         LP+ V ++ F+  +G+KIS S    +   E +EE       LRY L
Sbjct: 312 IVFPSMLKAHGGYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVLRYVL 371

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  KD  +     + R N +L   +GN V+R++ +  K YDG +P  G   + D  
Sbjct: 372 CANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTRKYYDGEVPACGELNDYDRQ 431

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            +   + V   +  N+++     AL   +++    ++Y    +PW++ KT+P R  T+L 
Sbjct: 432 TVGEVAAVKASLESNIEHYHFREALKDAMNIARIGNKYLADTEPWKVVKTDPQRVGTILN 491

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIF 507
           + +++    AI ++ F+P  A KI  +L V  E   ++ L     +  G  + +    +F
Sbjct: 492 IALQITANTAIAIEPFMPFSAAKILKMLSV--EKFGWEQLGTMDLIAAGHKIGEPVL-LF 548

Query: 508 PRF 510
            + 
Sbjct: 549 EKI 551


>gi|291514795|emb|CBK64005.1| methionyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 680

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 132/533 (24%), Positives = 235/533 (44%), Gaps = 34/533 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE ++  +++A+ Y N   HIGH A   I +D+  R+ RL G DV+   G+DEHG  I  
Sbjct: 3   KEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +   + L +S+D + RT+ K H +T    ++K+ D+G   
Sbjct: 63  KARKEGVTPQQIVDRYHALIKKSFEGLGMSFDIYSRTSSKTHAETASAFFRKLYDEGKFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +   +  +P +           
Sbjct: 123 EKTSMQYYDEEAQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVSGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  Y++ L  +     +         +  S++  GL+  ++SR   D
Sbjct: 183 VPVKRETKHWYLPLDRYEEFLREWILDGHKEWK-TNVYGQCKSWLDGGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHA 272
           WGI +P +     ++YVW DA   Y++ T  L        K      +H IGKD + FH 
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISATKDLTPDWERYWKSEDTKMVHFIGKDNIVFHC 300

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFL 329
           I +P+      +  LP+ V ++ F+  +G+KIS S    +   E +EE       LRY L
Sbjct: 301 IVFPSMLKAHGDYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVLRYVL 360

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  KD  +     + R N +L   +GN V+R++ +  K Y G +P  G  T+ D  
Sbjct: 361 CANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTQKYYGGKVPACGELTDYDRQ 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            ++  + V   +  N++N     AL   +++    ++Y    +PW++ KT+  R  T+L 
Sbjct: 421 SIAEVAAVKASLEGNIENYRFREALKDAMNIARIGNKYLADTEPWKVVKTDSARVETILN 480

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           + +++    AI ++ F+P  A KI  +L V             +  G  + + 
Sbjct: 481 IALQITANTAIAIEPFMPFSAEKILRMLAVGKFGWERLGAMDLIPAGHAIGEP 533


>gi|242238640|ref|YP_002986821.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130697|gb|ACS84999.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 676

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 241/541 (44%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  ++Q S+  +      DIS+D++  T  + + +   ++++++ + G I     
Sbjct: 66  MGLAPEQMIEQVSQEHQRDFTGFDISFDNYHSTHSEENRELSGLIYRRLKENGFIKSRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  +      +  D  V             G + +   A ++P + ++            
Sbjct: 126 SQLFDPEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ D L S+  S     L  +  N++  +  +GL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPAFSDMLQSWTRSGA---LQEQVANKMQEWFDAGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDIHFDEFWSKDSTADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAETYLKHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHIADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                  Q I +   ++   +A+ ++++L    +RY D Q PW + K         ++  
Sbjct: 419 QTFIEAAQTIADAYDSRESGKAVREIMALADLANRYVDEQAPWVVAKEEGRDAELQSICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P LA +    L        + +L Q L  G  ++  F  +F R
Sbjct: 479 MGIHLFRVLMTYLKPVLPALAARAEAFLNAE---LRWDTLAQPLN-GHTVNA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|260582922|ref|ZP_05850706.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094022|gb|EEW77926.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 682

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 131/545 (24%), Positives = 238/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 ATPVVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L N +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSDK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E++ +  +   ++I    +++  ++ + ++++L  + ++Y D + PW + K         
Sbjct: 414 EALFAEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKSPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|329956546|ref|ZP_08297143.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524443|gb|EGF51513.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 680

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 243/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     +   +   IS+D + RTT K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEAWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E + E     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLAEFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG++P  G   + 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAGELNDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   + V +E+ + +       A  + ++L    ++Y    +PW+L KT+  R +T
Sbjct: 419 DRETLKEFADVKEEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMPRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +   +         L  G  L  T + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMDSFDWAELGHTDLLPAGHRL-ATPELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|301769295|ref|XP_002920066.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353829|gb|EFB29413.1| hypothetical protein PANDA_008748 [Ailuropoda melanoleuca]
          Length = 593

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 183/542 (33%), Positives = 271/542 (50%), Gaps = 50/542 (9%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAAQNAG 66
           +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA +AG
Sbjct: 48  TTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSAAATRFSTGTDEHGLKIQQAAASAG 107

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +      D+ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG Y G
Sbjct: 108 LAPTELCDRVSAQFQQLFREAGISSTDFIRTTEARHRIAVQHFWGLLKARGLLYKGLYEG 167

Query: 127 WYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WY   +E +  + +V + +D             +PV W +EE Y FRLS +++ L  +  
Sbjct: 168 WYCASEECFLPEAKVTRQSDSSGDSCYVSLESGHPVSWTKEENYIFRLSQFREPLQRWLR 227

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
             P+ I P      V+ +++  L DLS+SRK+    WGI +P D    +YVW+DAL NYL
Sbjct: 228 GDPQAITPEPFLRAVLQWLEEELPDLSVSRKSSHLHWGIPVPGDDSQTIYVWLDALVNYL 287

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY +        +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H      
Sbjct: 288 TVIGYPNA---EFKSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSHWTVC 344

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA+ +G
Sbjct: 345 GQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELADALG 404

Query: 360 NLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEIRENM 405
            L++R  +  +                 PG           D ++++  + + +++ ++ 
Sbjct: 405 GLLNRCTAKRINPSGTYPVFCTTCFPSEPGLVGPSVRAQAEDYALVNAVATLPRQVADHY 464

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILL 462
            N  I++AL  V S V + + +     PW L   +P  A    TVL+V +E +R    LL
Sbjct: 465 DNFQIYKALEAVSSCVRQTNSFVQRHAPWRLNWESPVDAPWLGTVLHVALECLRVFGTLL 524

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFDPIFP 508
           Q   P LA+K+   L V+   R    L               +RL P   L      +FP
Sbjct: 525 QPVTPSLADKLLSRLGVSATERGLGELCFLPRFYGHPCPFEGRRLGPETGL------LFP 578

Query: 509 RF 510
           R 
Sbjct: 579 RL 580


>gi|260913818|ref|ZP_05920293.1| methionyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325]
 gi|260632131|gb|EEX50307.1| methionyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325]
          Length = 682

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 132/537 (24%), Positives = 238/537 (44%), Gaps = 43/537 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   A  
Sbjct: 6   RNILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHNVYFICADDAHGTPIMLNADK 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + ++  +     +  +ISY+++  T    +      ++KK+   G I     
Sbjct: 66  LGITPEELIAKSKADHVADFEGFNISYNNYHSTHSPENEALTAEMYKKLRANGFIKSRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
           S  +      +  D            E   G + +  ++ ++P + +             
Sbjct: 126 SQLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVL 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L A++  L  + +S     L  E  N++  + +SGL+   +SR    +G K
Sbjct: 186 KDSEHFFFDLPAFEGMLKEWIKSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGFK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +     D    +   FW  D      H IGKDI+ FH++
Sbjct: 243 IPDTEDKYFYVWLDAPIGYMASFKNLCDKSGLNFDDFWKKDSTAELYHFIGKDIVYFHSL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE- 332
           +WPA L   +L  P  VF+HG++   G K+SKS G  I     +  +  + LRY+   + 
Sbjct: 303 FWPAMLEGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKL 362

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D   + +   +R+NAD+ N   NL SRS   I K +DG +        +D ++L+
Sbjct: 363 NNRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSA----EIADPALLA 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                  +I    + +   + + +V+ L  + ++Y D + PW + K         T+  +
Sbjct: 419 EFVEKSTQIANYYEEREFGKVVREVMLLADKANKYIDDKAPWVIAKEEGRDAELQTICSM 478

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFDP 505
            +++ R LAI L+  +P++  +    L   ++ E+     L+ ++ P   L +  +P
Sbjct: 479 ALQLFRVLAIYLKPVIPQIIERAEAFLQDELSWESLNAPLLNHQILPFKALAQRLEP 535


>gi|256820661|ref|YP_003141940.1| methionyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582244|gb|ACU93379.1| methionyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 688

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 132/546 (24%), Positives = 243/546 (44%), Gaps = 44/546 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+
Sbjct: 3   KRYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+     +       IS+D++ RT+   HH T    +KK+ ++GD  +  
Sbjct: 63  KEGTTPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEI 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
               Y      +  D  V             G   +   +  N    ++ +         
Sbjct: 123 SEQLYDEEAHQFLADRFVIGTCPKCGNPEAYGDQCERCGSSLNATDLIDPKSSITGSKPT 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F  L+ YQ+ L  +     +         +V S++   LK  +++R   DWGI
Sbjct: 183 LKATKHWFLPLNRYQEFLEKWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRD-LDWGI 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + FH
Sbjct: 242 PVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDSDTQLVHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V ++ F+  +G K+S S    +   E +++     D LRY 
Sbjct: 302 CIIFPAMLKAEGSFILPANVPANEFLNLEGNKLSTSKNWAVWLHEYLQDFPNQQDVLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R   +  K Y+G++P    +   D 
Sbjct: 362 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVVPQADTYNNVDN 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + +  +I ++++      A  +++++    ++Y   ++PW+L KT+P+R  TV+
Sbjct: 422 ETLRQITELTDKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTVM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD----QRLKPGFMLHKTFD 504
           Y+ +++   LA+  + F+P  + K+  +L +      ++SL     + LK G  +    +
Sbjct: 482 YIALQIATALAVASEPFLPFTSEKLKRMLQLG--TITWESLKTNATELLKAGHRIG-VVE 538

Query: 505 PIFPRF 510
            +F + 
Sbjct: 539 LLFEKI 544


>gi|325281890|ref|YP_004254432.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313699|gb|ADY34252.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 676

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 139/543 (25%), Positives = 249/543 (45%), Gaps = 38/543 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  I+TA+ Y N   HIGH A   + AD+  R+ R  G +V+F  G+DEHG  I 
Sbjct: 1   MAKFKRNLITTALPYANGPVHIGHLAGVYVPADIYVRYLRQKGEEVVFIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             AQ  GVT +  VD+  +  +D  +   IS+D + RT+ K HH+     +KK+ D+G  
Sbjct: 61  IKAQKEGVTPQDIVDRYHQIIKDSFEEFGISFDIYSRTSSKTHHELSSAFFKKLYDEGKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQ------------HNPV----- 157
            +     +Y  +   +  D        + G +  Y +               +PV     
Sbjct: 121 IEKTSMQFYDEKAGQFLADRYIVGKCPHCGNERAYGDQCEACGTSLNATDLIDPVSAVTG 180

Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              +  E + ++  L  Y+D  L  +              +  S++ +GL+  +++R   
Sbjct: 181 NKPELKETKHWYLPLDRYEDW-LKEWILEDHKEWKSNVYGQCKSWLDNGLQPRAVTRD-L 238

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRF 270
           DWG+ +P D     ++YVW DA   Y++ T  L        K  P    +H IGKD + F
Sbjct: 239 DWGVPVPLDEAKGKVLYVWFDAPIGYISATKDLTPEWEKYWKD-PETRMIHFIGKDNIVF 297

Query: 271 HAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRY 327
           H I +PA      +  LP  V ++ F+  +G+KIS S    +   E + +     D LRY
Sbjct: 298 HCIIFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLRDFEGKQDVLRY 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N++L    GN ++R++ +  K + G++P  G   + D
Sbjct: 358 VLTANAPETKDNDFTWKDFQARNNSELVAIYGNFINRALVLTQKYFGGIVPERGELADYD 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           + +L+    ++  + +N+ N      L + ++L    ++Y    +PW+L KT+  R  T+
Sbjct: 418 KEVLAEIPEIISRVEKNLDNFHFREGLKECMNLARLGNKYLADTEPWKLIKTDEARVKTI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           L + +++   L+ L + F+P  A+K+ D L +A      +  D+ +  G  L++    +F
Sbjct: 478 LNICLQIAGDLSTLTEPFIPFSASKLRDFLNIAPIAWN-RMGDEVVPAGHRLNEPGL-LF 535

Query: 508 PRF 510
            + 
Sbjct: 536 EKI 538


>gi|86140954|ref|ZP_01059513.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832896|gb|EAQ51345.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 693

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 140/544 (25%), Positives = 240/544 (44%), Gaps = 48/544 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ R  G DV +  G+DEHG  I+  A+
Sbjct: 4   KRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRGMGKDVAYICGSDEHGVAISIKAK 63

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  VD+  +  +D  +   IS+D++ RT+ + HHDT    +K +  KGD  +  
Sbjct: 64  KEGITPQEVVDKYHKIIKDSFEDFGISFDNYSRTSAQVHHDTASEFFKTLYAKGDFIEEV 123

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQ-------------------- 158
               +      Y  D          G +  Y +   N                       
Sbjct: 124 TEQLFDAEANQYLADRFVTGTCPKCGHEEAYGDQCENCGSSLNATDLINPKSTISGSKPV 183

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E   +F  L  Y+D L  +     +         +  S++  GL+  +++R   DWGI
Sbjct: 184 LKETRHWFLPLDRYEDFLKKWILDGHKKDWKPNVYGQCKSWIDEGLRPRAVTRD-LDWGI 242

Query: 219 KIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
            +P D     ++YVW DA   Y++ T  +      +   +W AD    +H IGKD + FH
Sbjct: 243 PVPVDGAEGKVLYVWFDAPIGYISSTKEWAAREGKNWEDYWKADDTKLVHFIGKDNIVFH 302

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP  V ++ F+  +G K+S S    +   E +EE     D LRY 
Sbjct: 303 CIIFPSMLEAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPGQQDVLRYT 362

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R V +  K Y+G IP    F   DE
Sbjct: 363 LTANAPETKDNDFTWADFQARNNNELVAIFGNFINRVVVLTNKYYEGKIPQALDFNAEDE 422

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +L+        I  +++      A  +++++    ++Y    +PW+  KT+P+R  TV+
Sbjct: 423 KVLAEMKAYPAVIASSIERYRFREAQNELMNVARLGNKYLADAEPWKTFKTDPERTKTVM 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--------RCFQSLDQR---LKPGF 497
           Y+ +++   LA+L + F+P  A  +  +L +  E+          ++ L ++   L  G 
Sbjct: 483 YIALQIAGTLAVLSEPFLPHTAKTLKQMLNIESEDPLMQLPEPLSWEVLGEKIDLLPVGH 542

Query: 498 MLHK 501
            ++K
Sbjct: 543 SINK 546


>gi|303276647|ref|XP_003057617.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226460274|gb|EEH57568.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 632

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 190/511 (37%), Positives = 279/511 (54%), Gaps = 13/511 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  I+TAI Y N  PH+GHAYE I  D +AR+HR  G DVL+ TG+DEHGQKIA+AA+
Sbjct: 5   KLKFCITTAINYANGAPHMGHAYEAISTDCIARYHRAYGRDVLYQTGSDEHGQKIAEAAE 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG       D+    F+D+     ++ D + RTT   HH+ C  L+++  D GDIY   
Sbjct: 65  TAGCEPIELCDKYVAAFQDLNAKTSVANDVYNRTTSPEHHEACGELFRRSRDNGDIYLDT 124

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y GWY++R+E +  + +               P++ M EE YFFR+S YQ +L+ Y E +
Sbjct: 125 YEGWYNVREEMFVTETDAAAAD--YKDPVSGKPLKKMSEESYFFRMSKYQSRLIEYIEEN 182

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PEFI P  RRNE++    +  L+DLS+SR TFDWGI +PD P +++YVW DALTNYLT  
Sbjct: 183 PEFIQPTRRRNEILARLREDELRDLSVSRTTFDWGIPVPDTPGHVLYVWFDALTNYLTGV 242

Query: 243 GYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KG 300
           G+           FWP  + +IGKDI  FH + WP  L SA +PLPK VF HGF+    G
Sbjct: 243 GWPKKEVTDGGNPFWPPAVQIIGKDITWFHCVIWPCMLFSAKIPLPKTVFGHGFVTASDG 302

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS+GNV+DP+E + +   D+ RY+L+R    G D  + +  L    NADLA+ +GN
Sbjct: 303 QKMSKSIGNVVDPLEQLAKYPSDSFRYYLMRNGVYGSDIPFSEANLVYVHNADLADVLGN 362

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R+ ++  K+  G++P        D         +       M+N    +     I+ 
Sbjct: 363 LVHRATNLCAKNCAGVVPDVAPERVFD------VGALRATSEHAMKNLETQKCCELAINA 416

Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + + ++Y     PW +K     +R + ++  T+E +   A  L  F+P   + IF+ L  
Sbjct: 417 MKDTNKYLTDAAPWAVKGDGAAERKAVIIRSTLEAVYAAAHFLSPFIPAACDHIFEKLGA 476

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +     S +  L PG  +      +F +F
Sbjct: 477 PAKPIWRLSRESNLTPGTTV-SVGGILFAKF 506


>gi|194222442|ref|XP_001917887.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Equus caballus]
          Length = 593

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 184/540 (34%), Positives = 271/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R+ RL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRYRRLRVPSAAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      DQ S  F+ +     IS  DFIRTTE RH    +  W  +  +G +YKG
Sbjct: 104 ATAGLAPAELCDQVSAQFQQLFREASISSTDFIRTTEARHRVAVQHFWGVLKARGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DE +  + +V +     G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASDECFLPEAKVTRQPGPSGDLCPVSLESGHPVSWTKEENYIFRLSQFREPLQ 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P  I P    + V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRGDPRAITPEPFHHAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WP   H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVIGYPNA---EFKSWWPTTSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPRSCLDRYTVDGFRYFLLRQGVPHWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +                 PG           D +++S  + + +++
Sbjct: 401 DALGGLLNRCTAKRINPSGTYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 ADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWQSPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FPR 
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSATERGLGELYFLPRFHGHPCPFEGRRLGSETGLLFPRL 580


>gi|187736581|ref|YP_001878693.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426633|gb|ACD05912.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 550

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 184/517 (35%), Positives = 279/517 (53%), Gaps = 15/517 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+TAI Y N  PHIGHAYE ++ADVLAR+HR+ G +V F TG D+HGQK+ + A+  G
Sbjct: 17  YYITTAIDYTNGPPHIGHAYEKVLADVLARWHRMKGEEVYFLTGVDQHGQKVQQTAEKLG 76

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  V+  +  F  + D L IS D +  TT+ RH    + +   + DKG +YK  Y G
Sbjct: 77  ITPQEHVNNITGQFLALWDRLGISNDGWASTTDPRHKACVQKILTDLKDKGQLYKKSYKG 136

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YS+R E +  D E     +   +  +   V  +EEE ++FRL+ + + +  + E   +F
Sbjct: 137 FYSVRQEQFLTDKERDAEGN---FGPEWGEVVELEEENWYFRLTDHVEWMKQFVEKSSDF 193

Query: 187 ILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           +LP  R+ EV++ +       +S  +    WGI+ P DP+++ YVW DAL NY++  GYL
Sbjct: 194 VLPSFRKAEVLNAIDFDSDLCISRPKSRLSWGIEFPFDPEFVTYVWFDALINYISFAGYL 253

Query: 246 DNPD---GSKAKFWPADLHVIGKDILRF-HAIYWPAFLLSANL--PLPKKVFSHGFILHK 299
             PD      +K WPAD  VIGKDIL   H +YWPA L +          +  HG+    
Sbjct: 254 AEPDSGLPEFSKLWPADCEVIGKDILVPAHGVYWPAMLHAMGFSDEEMPTLLVHGWWNIN 313

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SKS+GNV+DP  + E+ G + +RY+LVR+I  GKD  +D D L    N +LAN +G
Sbjct: 314 GEKMSKSIGNVVDPNLLAEQFGPEPVRYYLVRDITTGKDANFDADRLVMLYNTELANDLG 373

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL +RS++M  +  D +I    A+  E+ +++ S   + +    + M + +   ALA + 
Sbjct: 374 NLCNRSINMTRRYCDSVISGAEAYDDEASKALRSTMDQAVTLFSKYMDDNMASDALAALN 433

Query: 419 SLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + VS  + Y + Q+PW+L K      R   VL   +E   Q   L+   +P  + +I   
Sbjct: 434 AQVSACNAYIEQQQPWQLAKDEASAPRLRCVLRHLLECCAQTGYLIGCVLPDASARILGQ 493

Query: 477 LFVADENRCF--QSLDQRLKPGFMLHKTFDPIFPRFL 511
           L   D  R     +L   + P         P+FPR L
Sbjct: 494 LNAGDLFRGLTPAALKWGILPAGHRINDPAPVFPRIL 530


>gi|54308361|ref|YP_129381.1| methionyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|68565982|sp|Q6LSZ7|SYM_PHOPR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46912789|emb|CAG19579.1| putative methionyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 680

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +++ S+  +      DIS+D++  T    + +    ++ ++ DKG I     
Sbjct: 66  MGMEPEQMIEEVSKEHQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE----------- 162
           S  +    E +  D            E   G +       ++P   ++            
Sbjct: 126 SQLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLIDPKSAVSGATPIM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L  ++D L ++ +S     L  E  N++  + +SGL    +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFEDMLKAWTKSGA---LQTETSNKMQEWFESGLHQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETSKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 303 LFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVN+D+ N I NL SR+   I K +DG +      T ++  + 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLSE----TFAEPELY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFANAADRIAELYETREFSRAIREITALADKANQYIDEKAPWVVAKQEGKDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P L  +    L    E   ++ + Q L     + K F  +F R
Sbjct: 479 VGINLFRVLITYLKPVMPLLTERTEAFLN---ETLTWEGVAQPLT-NHEVTK-FKALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|183598265|ref|ZP_02959758.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
 gi|188020435|gb|EDU58475.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
          Length = 675

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 133/540 (24%), Positives = 235/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +  +   ++  +D      ISYD++  T  + +     +++ K+ + G I     S
Sbjct: 67  GVSPEDMIAAVNKEHQDDFAGFAISYDNYHSTHSEENKQLSELIYNKLKNNGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QWM 160
             Y      +  D            E   G + +   A ++P               +  
Sbjct: 127 QLYDPEKGMFLPDRFVKGTCPTCKAEDQYGDNCEVCGATYSPTELINPRSVVSGATPEMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G +I
Sbjct: 187 DTEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +   + +  +FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRGNINFDEFWNKDSKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSGYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K + G +        +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFGGKLSD----NIADPALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 Q I +   ++   +A+ ++++L    +RY D + PW + K          +  +
Sbjct: 420 QFIDAAQIIGDAYTSREYGKAVREIMALADLANRYVDEKAPWVVAKQEGKDQELQDICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P LA +    L +      + S+   L         F  +F R 
Sbjct: 480 GINLFRVLMTYLKPILPGLAKRAEAFLNIE---LTWDSITTPLT--HHDVAPFKALFTRI 534


>gi|325578269|ref|ZP_08148404.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160005|gb|EGC72134.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
          Length = 682

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 237/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIYFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+  K  I
Sbjct: 61  LNADKLGITPEELIAKAKADHVRDFAGFNISFDNYHSTHSEENKQITAEIYNKLKAKDFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KTKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +SGL+   +SR   
Sbjct: 181 ATPIIKESEHFFFDLPAFEGMLKEWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +     D       +FW  +      H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCDREGIDFNEFWGENSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSEYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAS 445
           E++ +  +   ++I    +++  ++A+ ++++L  + ++Y D + PW + K +       
Sbjct: 414 EALFAEFTAQAEQIATYYESREYNKAIREIMTLTDKANKYIDEKAPWVIAKEDGKETELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L     L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQTE---LTWNNIAQPLLS-HQLT-PFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|224025452|ref|ZP_03643818.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM
           18228]
 gi|224018688|gb|EEF76686.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM
           18228]
          Length = 680

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 141/546 (25%), Positives = 250/546 (45%), Gaps = 41/546 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     RD      IS+D + RT+ K HHDT    ++K+ DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +   +  +P +         
Sbjct: 121 FIEKTSEQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEGWLRQWILEEHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPACGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+  R +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMGRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFD 504
           +L + ++++  LAI  + F+P  + K+  +L +  ++  ++ L     L+ G  L+K  +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRKMLNM--QSFEWEQLGRTDLLEAGHELNKA-E 535

Query: 505 PIFPRF 510
            +F + 
Sbjct: 536 LLFEKI 541


>gi|84394346|ref|ZP_00993068.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375039|gb|EAP91964.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 686

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 135/544 (24%), Positives = 230/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   
Sbjct: 3   TDPRQLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  +    E +  D            E   G +       ++P +            
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGS---LQNETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ 
Sbjct: 240 GFEIPGEKNKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E   
Sbjct: 360 AAKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLAAEFAEPE--- 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +      + I +  + +   RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 417 -LYNEFVAAAERIGQLYETREFSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P+LA +    L    E   ++++   L     + K F  +
Sbjct: 476 VSSVGINLFRVLMAYLKPVMPELATRTEAFLN---EELTWEAIATPLT-DHEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FSRI 534


>gi|187663990|sp|A7MZT3|SYM_VIBHB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 686

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 134/543 (24%), Positives = 231/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 64  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +    E +  D            E   G +       ++P + ++          
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEENKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 361 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 421 FVAAADR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L  G  + K F  +F
Sbjct: 477 CSVGINLFRVLMTYLKPVMPALAARTEAFLN---QELTWEGIAAPLT-GHEITK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|254291743|ref|ZP_04962529.1| methionyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422336|gb|EDN14297.1| methionyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 731

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|153824980|ref|ZP_01977647.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153828134|ref|ZP_01980801.1| methionyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|254226392|ref|ZP_04919980.1| methionyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621081|gb|EAZ49427.1| methionyl-tRNA synthetase [Vibrio cholerae V51]
 gi|148876376|gb|EDL74511.1| methionyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149741492|gb|EDM55522.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 731

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|153800950|ref|ZP_01955536.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123541|gb|EAY42284.1| methionyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 731

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|149188165|ref|ZP_01866460.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148838153|gb|EDL55095.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 688

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 228/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNVVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     
Sbjct: 71  MGISPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPIM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFEEYWNKDSNTELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSENFAEPELYNEFV 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 428 AAADR----IAELYEAREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P LA +    L    E   +  + Q L     + K F  +F R
Sbjct: 484 VGINLFRVLMTYLKPVMPALAARTEAFLN---EELSWDGIAQPLTA-HEITK-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|328766262|gb|EGF76318.1| hypothetical protein BATDEDRAFT_14978 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 554

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 185/538 (34%), Positives = 288/538 (53%), Gaps = 34/538 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            +YI++ I Y NA PHIGH Y  I+AD L R+    G   +++TGTDEHG KI +AA+ A
Sbjct: 16  PVYITSPIFYVNAVPHIGHLYSAILADSLKRWFEFKGQKTMYSTGTDEHGLKIQQAAEAA 75

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               K F +  S+ F+ +    DISY  FIRTT+  H++  + LW+ +   G +YKG + 
Sbjct: 76  KSDPKEFCNDISKTFKSLFKKSDISYTRFIRTTDSDHYEAVKALWECLERGGFLYKGYHE 135

Query: 126 GWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           GWY + DE +Y + ++                     V+W +EE Y F+LSA++DK + +
Sbjct: 136 GWYCVSDETFYPESQIEASAADPSIMVCHISKESGKVVEWTKEENYKFKLSAFRDKTIEW 195

Query: 180 YESHPEFILPIERRNEVISFVKSGLKD---LSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            +++P+ I+P  + N V+S +K G +    +S  R    WGI +P+D  +++YVW+DAL 
Sbjct: 196 LKANPKVIVPESQYNFVLSQLKKGEQTDLSVSRLRSRISWGIPVPNDDTHVIYVWLDALV 255

Query: 237 NYLTTTGYLDNPDGS-------KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
           NYLT   Y   P              WPA +HV+GKDI++FHAIYWPAFL++A LPLP+K
Sbjct: 256 NYLTVAKYPWTPSKDVQMSEIAAQNGWPAHIHVVGKDIIKFHAIYWPAFLMAAGLPLPQK 315

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + SHG  L   +K+SKS+GNV++P  +IE+ GVD +RYFL+R+     D  +    +  R
Sbjct: 316 IISHGHWLMNHQKMSKSVGNVVEPNALIEKWGVDPVRYFLMRDGVINNDPEFSDKLIFSR 375

Query: 350 VNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
              DL + +GNLV R S   I +  +  + T     ++    +   S +  ++ + M   
Sbjct: 376 YKNDLGDQLGNLVMRVSTPRINQSGEIPLATDEPLDDTGVKKMEQLSTLADQVDQCMIQG 435

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELK-------KTNPDRASTVLYVTVEVIRQLAIL 461
            +  AL  +  +++++++Y+   +PW++        K NP +  +VL+V  E +R  A+L
Sbjct: 436 NVADALQHIQEMIADLNKYWTDAEPWKMANAARSDSKPNP-KLQSVLFVAYEGLRICALL 494

Query: 462 LQAFVPKLANKIFDILFVADENRCF---------QSLDQRLKPGFMLHKTFDPIFPRF 510
           LQ  +P     + D L V    R F           L    K    L     P+FPR 
Sbjct: 495 LQPVMPTKMTNLLDTLDVDCTERTFFNAYPGKRYYHLKNTFKKPPTLLSKQPPLFPRI 552


>gi|171914551|ref|ZP_02930021.1| methionyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 527

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 195/522 (37%), Positives = 299/522 (57%), Gaps = 21/522 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+TAI Y NA PHIGHAYE ++ADV+ARF RL+G +V F TG D+HGQK+ K+A  
Sbjct: 3   KPYYITTAIDYTNAPPHIGHAYEKVLADVMARFQRLNGREVYFLTGVDQHGQKVQKSADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ + FVD  S+ F ++   L + YD +  TT + H    R + +K+ D G +YK  Y
Sbjct: 63  AGVSPQQFVDDISQKFIELWAKLGVQYDGWAATTAEPHKKVVRAMLQKLHDAGQLYKQSY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G+YS+R E +  D E  +G DG +       V+  EE  ++F+LS + D L +Y +SHP
Sbjct: 123 TGFYSVRQEQFLTDKE--RGPDGTFGEEWGEVVELQEE-NWYFKLSEHVDWLRAYIKSHP 179

Query: 185 EFILPIERRNEVISFVKSGL-KDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +FI P  R N+V++ +++ + +DL +SR      WGI +P D +++ YVW DALTNY++ 
Sbjct: 180 DFIFPAFRTNDVLNALENSVGQDLCISRPQERLSWGIPLPFDERFVNYVWFDALTNYISF 239

Query: 242 TGYLDNPD-----GSKAKFWPADLHVIGKDILRF-HAIYWPAFLLSANLP--LPKKVFSH 293
            GYL +             WPAD HVIGKDIL   HAIYWP  L +   P     K+  H
Sbjct: 240 AGYLSDEVGNEGLPEFQSIWPADAHVIGKDILVPAHAIYWPIMLHALGFPDDQMPKLIVH 299

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+   KG+K+SK+LGNV+DP EV      +ALRY+L+R+++ G D    ++ ++   N +
Sbjct: 300 GWWNIKGQKMSKTLGNVVDPNEVSNVFTPEALRYYLMRDMSTGYDADLSEERMQIAYN-E 358

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHR 412
           LA G+GNL++R+++M  K  +G++ T G +  E + ++    +       E M N  IH 
Sbjct: 359 LAKGLGNLLNRALNMCQKYREGVLSTGGGYDDEVNLALRQTVAAAPAAYVEEMNNWAIHN 418

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            +A+   +V+  +++ D  +P++L K      R  +VLY   E +  ++ILL   +P+  
Sbjct: 419 GIAEAWKIVTHANQFVDMTQPFKLAKDPEQAARLDSVLYHLAEALAHVSILLSPIMPEAC 478

Query: 471 NKIFDILF-VADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            K+   L     E    + L    L  G  L +   P+FPR 
Sbjct: 479 KKLQFQLGWTPAEGFQVKDLAWGLLSEGHQLGQPV-PLFPRI 519


>gi|262402619|ref|ZP_06079180.1| methionyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351401|gb|EEZ00534.1| methionyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 683

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|307130139|ref|YP_003882155.1| methionyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306527668|gb|ADM97598.1| methionyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 677

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 135/540 (25%), Positives = 236/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ  
Sbjct: 7   KILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV  +  +   S+  +      +ISYD++  T  + + +   ++++++ + G I     S
Sbjct: 67  GVAPEQMIATVSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYRRLKENGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------------ 162
             +      +  D  V             G + +   A ++P + +E             
Sbjct: 127 QLFDPEKSMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSAVSGATPVMR 186

Query: 163 --EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E +FF L A+ D L S+  S     L  +  N++  +  +GL+   ++R    +G ++
Sbjct: 187 ESEHFFFDLPAFSDMLQSWTRSGA---LQEQVANKMQEWFDAGLQQWDITRDAPYFGFEV 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLSFDEFWRKDSSTELYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKADTYLKHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGQL----AGQLADPALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 Q I +   ++   +A+ ++++L    +RY D Q PW + K          +  +
Sbjct: 420 TFIDAAQTIADAYGSRESGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  +    L        + +L Q L     +   F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPSLTERAEAFLQTE---LRWDNLTQPLT-NHRVGA-FKALFNRI 534


>gi|121728181|ref|ZP_01681216.1| methionyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673338|ref|YP_001216504.1| methionyl-tRNA synthetase [Vibrio cholerae O395]
 gi|121629578|gb|EAX62001.1| methionyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315221|gb|ABQ19760.1| methionyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012852|gb|ACP09062.1| methionyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 731

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRILMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|28807062|dbj|BAC60332.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 676

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 134/539 (24%), Positives = 229/539 (42%), Gaps = 47/539 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  G
Sbjct: 1   MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     S 
Sbjct: 61  ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------WME 161
            +    E +  D            E   G +       ++P +                +
Sbjct: 121 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +IP
Sbjct: 181 SEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIY 274
            +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+++
Sbjct: 238 GEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLF 297

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-I 333
           WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   +  
Sbjct: 298 WPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLN 357

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++ 
Sbjct: 358 SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAA 417

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVT 451
             R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  V 
Sbjct: 418 ADR----IAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVG 473

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + R L   L+  +P LA +    L    +   ++ + Q L  G  + K F  +F R 
Sbjct: 474 INLFRVLMTYLKPVMPALAARTEAFLN---QELTWEGIAQPLT-GHEITK-FKALFNRI 527


>gi|121587393|ref|ZP_01677163.1| methionyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153819292|ref|ZP_01971959.1| methionyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153822399|ref|ZP_01975066.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081209|ref|YP_002809760.1| methionyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254848166|ref|ZP_05237516.1| methionyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298498854|ref|ZP_07008661.1| methionyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655500|gb|AAF94195.1| methionyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121548396|gb|EAX58458.1| methionyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510152|gb|EAZ72746.1| methionyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126520106|gb|EAZ77329.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227009097|gb|ACP05309.1| methionyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254843871|gb|EET22285.1| methionyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297543187|gb|EFH79237.1| methionyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 731

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|262191524|ref|ZP_06049707.1| methionyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032578|gb|EEY51133.1| methionyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 683

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  S     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFSGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|262167212|ref|ZP_06034924.1| methionyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|187651896|sp|A5F2P8|SYM_VIBC3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|262024356|gb|EEY43045.1| methionyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 683

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLNFNEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRILMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|150003455|ref|YP_001298199.1| methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|187646706|sp|A6KYR3|SYM_BACV8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|149931879|gb|ABR38577.1| Methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 680

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 240/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRKMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|99034647|ref|ZP_01314595.1| hypothetical protein Wendoof_01000592 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 471

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 217/476 (45%), Positives = 302/476 (63%), Gaps = 39/476 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T + Y N +PHIGHAY  ++ DV+ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFENFYITTPVYYVNDKPHIGHAYTSLLCDVVARFMKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+   +  K F D+ S +F+++A  ++  YDDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKAKEMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              YSGWYS+RDEA+Y + E+  G            VQW++EE YFFRLS +Q+KLL  Y
Sbjct: 121 LDSYSGWYSVRDEAFYQESELIDGK-----APTGAEVQWIKEESYFFRLSNWQEKLLELY 175

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P + ++++YVWIDALTNYLT
Sbjct: 176 KNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVPGNDKHVIYVWIDALTNYLT 235

Query: 241 TTGYLDNPDGSKAKFWPA----------------------------------DLHVIGKD 266
           + G+         +FW                                    ++HVIGKD
Sbjct: 236 SIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPVSSAANLADNSFNVHVIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           ILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKISKSLGNVIDPI + +E GVD LR
Sbjct: 296 ILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKISKSLGNVIDPIGLAQEFGVDQLR 355

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL+RE + G+DG + K  +  R+N++LAN IGNLV R++S + K   G++PT       
Sbjct: 356 YFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKQCSGIVPTIDQSLLK 415

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            E  L  C  +L ++  ++     +  +  +I++ SE + Y D   PW L KT+ +
Sbjct: 416 GEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEANAYIDKSAPWTLSKTDRE 471


>gi|258621822|ref|ZP_05716853.1| methionyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586053|gb|EEW10771.1| methionyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 729

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 50  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 110 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 169

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 170 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 229

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 230 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 286

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 287 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 346

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 347 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 406

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 407 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPE---- 462

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 463 LYAEFAGAADRIAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 522

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 523 CTVGINLFRVLVTYLKPVMPALAERTEAFLN---QELTWEGIATPLT--DHAVTPFKALF 577

Query: 508 PRF 510
            R 
Sbjct: 578 NRI 580


>gi|297578641|ref|ZP_06940569.1| methionyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536235|gb|EFH75068.1| methionyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 731

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|90413229|ref|ZP_01221224.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325781|gb|EAS42239.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 680

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +      DIS+D++  T    + +    ++ ++ DKG I     
Sbjct: 66  MGMEPEQMIAEVSKEHQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P                 
Sbjct: 126 SQLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPIM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++D L ++ +S     L  E  N++  + +SGL    +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFEDMLKAWTKSGA---LQTETSNKMQEWFESGLHQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVN+D+ N I NL SR+   I K ++G +      T ++ ++ 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFEGKLSE----TFAEPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFANAADRIAELYETREFSRAIREITALADKANQYIDEKAPWVVAKQEGQDQELQDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P LA +    L    E   ++ + Q L     + K F  +F R
Sbjct: 479 VGINLFRVLITYLKPVMPLLAERTEAFLN---ETLTWEGVAQPLT-NHEVTK-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|146318899|ref|YP_001198611.1| methionyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145689705|gb|ABP90211.1| Methionyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 602

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 169/455 (37%), Positives = 270/455 (59%), Gaps = 11/455 (2%)

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T + +VD  +   +++ ++LDISYD FIRTT+  H +    +++K+  + DIY G YSG
Sbjct: 1   MTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSG 60

Query: 127 WYSLRDEAYYND---DEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WYS+ DE ++ +   +EV++  +G+         + V W+ EE YF RLS YQDKL+ ++
Sbjct: 61  WYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFF 120

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDAL NY 
Sbjct: 121 NAHPDFIQPAGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALLNYA 180

Query: 240 TTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP ++ +HG+ + 
Sbjct: 181 TALGYGQEETVNYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGWFVM 240

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +LAN +
Sbjct: 241 KDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVDRINYELANDL 300

Query: 359 GNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     RAL  V
Sbjct: 301 GNLLNRTVAMINKYFGGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPRALEAV 360

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +N I +
Sbjct: 361 WNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSNAIME 420

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L +             L  G  +     PIFPR 
Sbjct: 421 QLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 455


>gi|161582014|ref|NP_230681.2| methionyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|255745456|ref|ZP_05419404.1| methionyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262151292|ref|ZP_06028427.1| methionyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|25009403|sp|Q9KT69|SYM_VIBCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|255736531|gb|EET91928.1| methionyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030908|gb|EEY49537.1| methionyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 683

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|308049567|ref|YP_003913133.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631757|gb|ADN76059.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 685

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 128/545 (23%), Positives = 231/545 (42%), Gaps = 48/545 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E  K+ +++A+ Y N   H+GH  E I  D+  RF  L G    +    D HG  I   
Sbjct: 3   TESRKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQNLRGNKCTYVCADDTHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G++ +  + Q S+  +       I++D++  T    +    + +++++ + G I  
Sbjct: 63  AQQLGMSPEEMIAQVSKEHQADFADFHIAFDNYHSTHSDENRQWAQEVYRRLQEGGYIKT 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
                 +    E +  D            E   G + +     ++PV+            
Sbjct: 123 KVIEQLFDPEKEMFLPDRFVKGTCPKCDTEDQYGDNCENCGTTYSPVELKNPKSVLSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L  +++ L  +  S     L  E  N++  + + GL+   +SR    +
Sbjct: 183 PVLKESEHFFFDLPQFKEVLQQWTHSGA---LQSEMANKLNEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIP-DDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           G +IP  D +   YVW+DA   Y+     L           +W  D      H IGKDI+
Sbjct: 240 GFEIPGTDGKKFFYVWLDAPIGYMGAFQNLCERRDDLNFEDYWGQDSDAELYHFIGKDII 299

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  ANL  P  VF+HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 300 YFHSLFWPAMLHGANLRKPTNVFAHGYVTVNGAKMSKSRGTFIKARTYLDHLNPEYLRYY 359

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   +RVNAD+   + N+ SR+   I K +DG +       E  
Sbjct: 360 YAAKLNDRIDDLDLNLEDFAQRVNADMVGKLVNIASRTAGFIAKRFDGKLADGIDQPE-- 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+      + I    + +   +A+ ++++L  + + Y     PW+L K      +  
Sbjct: 418 --LLAEFQNAAETIANFYEGREYGKAIREIMALADKANAYIADAAPWQLAKQEGMEQKTQ 475

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + R L I L+  +P++A +    L        + S++  L  G  ++  F  
Sbjct: 476 EVCSMGIHLFRILMIYLKPVLPEIAKETETFLGAE---LTWDSINTVLT-GHTIN-PFKA 530

Query: 506 IFPRF 510
           +  R 
Sbjct: 531 LIQRI 535


>gi|261343413|ref|ZP_05971058.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568556|gb|EFB74091.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 675

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 135/540 (25%), Positives = 238/540 (44%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  +   ++  ++      ISYD++  T  + +     +++ K+ + G I     S
Sbjct: 67  GISPEEMIAAMNQEHQNDFAGFQISYDNYHSTHSEENKQLSEMIYGKLKNNGFIKSKTIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------WM 160
             Y      +  D            E   G + +  +A ++P +                
Sbjct: 127 QLYDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVVSGATPVMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A+ D L ++  S     L  +  N++  + +SGL    ++R +  +G +I
Sbjct: 187 ETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLHQWDITRDSPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEFWNKDSKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSNYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDNLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K + G +        ++  +  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFSGKLSA----NLAEPELYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 Q I +   N+   +A+ ++++L    +RY D + PW + K          +  +
Sbjct: 420 QFVDAAQVIGDAYTNREYGKAVREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  +  D L V  E   + ++++ L         F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPSLTQRAEDFLNVKLE---WDAINKPLL--NHDVAPFKALFNRI 534


>gi|269967339|ref|ZP_06181400.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828047|gb|EEZ82320.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 691

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 229/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     
Sbjct: 71  MGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 428 AAADR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P LA +    L    +   ++++   L  G  + K F  +F R
Sbjct: 484 VGINLFRVLMTYLKPVMPSLAARTEAFLN---QELTWENIAAPLT-GHEITK-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|270346539|pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2
          Length = 547

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 5   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 65  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 125 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 184

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 185 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 242 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 361

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 418 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 478 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|46015192|pdb|1P7P|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionine Phosphonate
 gi|46015201|pdb|1PFU|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionine Phosphinate
 gi|46015202|pdb|1PFV|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Difluoromethionine
 gi|46015203|pdb|1PFW|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Trifluoromethionine
 gi|46015204|pdb|1PFY|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionyl Sulphamoyl Adenosine
 gi|46015205|pdb|1PG0|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methioninyl Adenylate
 gi|46015206|pdb|1PG2|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
           With Methionine And Adenosine
          Length = 551

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 5   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 65  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 125 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 184

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 185 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 242 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 361

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 418 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 478 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|254229863|ref|ZP_04923268.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393754|ref|YP_003285608.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937632|gb|EDN56485.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337348|gb|ACY51143.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 691

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 228/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     
Sbjct: 71  MGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L          ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKNKFFYVWLDAPIGYMGSFKNLCGKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSDNFAEPELYNEFV 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 428 AAADR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICS 483

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +P LA +    L    +   ++++   L  G  + K F  +F R
Sbjct: 484 VGINLFRVLMTYLKPVMPALAARTEAFLN---QELTWENIAAPLT-GHEITK-FKALFNR 538

Query: 510 F 510
            
Sbjct: 539 I 539


>gi|89092515|ref|ZP_01165468.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083027|gb|EAR62246.1| methionyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 679

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 236/539 (43%), Gaps = 46/539 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I   A  
Sbjct: 6   RKILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKQRGHQCTYVCADDAHGTPIMLKADQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +D+ S+  +       + +D++  T  + +     +++  + D G I K   
Sbjct: 66  MGISPQELIDKVSQEHQRDFSGFMVGFDNYYSTHSEENQHFASLIYTALRDGGHIAKKTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
           +  Y    E +  D  V             G   +   A ++PV+               
Sbjct: 126 TQAYDPEKEMFLPDRFVKGECPKCGEPDQYGDSCEKCGATYSPVELKNAYSAVSGAKPIE 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L  ++  L ++ ++H    +  +  +++  + ++GL++  +SR    WG +
Sbjct: 186 KESEHYFFKLGDFEGFLRNWVDNH----VQEQMIHKLNEWFEAGLQNWDISRDAPYWGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   + D    +  ++W         H IGKDI  FH +
Sbjct: 242 IPDAPGKYFYVWLDAPIGYMASFKNWCDKNGANFDEYWSESSNAELYHFIGKDIAYFHTL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P  VF HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 302 FWPAMLEGAGFRKPNGVFCHGFLTVDGQKMSKSRGTFIMAETYLNHLRPEYLRYYFAAKL 361

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +  + RVNADL N + N+ SR    I K +DG +    A    +  + +
Sbjct: 362 SSGIDDIDLNLEDFRMRVNADLVNKVINIASRCAGFIKKKFDGEL----ASQLVEPELYT 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 + I    +N+   +A+ +++++  + ++Y DA +PW L K             +
Sbjct: 418 EAVAAGESIASAYENREYGKAMREIMAIADKANQYIDAAEPWVLAKQEGKEQEVQDCCTM 477

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + + R +   L   +PK+A      L V D    + S+ Q L     ++K F P+  R
Sbjct: 478 GINLFRVILTYLAPVLPKVAEDAQAFLAVDD--LAWNSIQQPLLS-HKINK-FKPLMQR 532


>gi|237808288|ref|YP_002892728.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511563|sp|C4LEX5|SYM_TOLAT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|237500549|gb|ACQ93142.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 675

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 140/541 (25%), Positives = 231/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + ++ A+ Y N   H+GH  E + AD+  RF R+ G ++ F    D HG  I   AQ 
Sbjct: 6   RNILVTCALPYANGSIHLGHMLEHVQADIWVRFQRMRGHNIHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S+  +       IS+D++  T    +     +++ K+ D G I     
Sbjct: 66  LGITPEEMIAAVSQEHQTDFAGFKISFDNYHSTHSDENRYFSELIYTKLKDNGFIKSKTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKNMFLPDRFVKGTCPKCKAVDQYGDNCEVCGATYSPTELINPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L  + D L ++  S     L  E  N++  +  SGL    ++R    +G +
Sbjct: 186 KETEHFFFDLPQFADMLQAWTTSGA---LQEEISNKLNEWFTSGLHQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
           IP  P    YVW+DA   Y+ +   L +         FW  +      H IGKDI+ FH+
Sbjct: 243 IPGAPGKFFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWSQNSDAELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  +F HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPSNIFVHGYVTVNGAKMSKSRGTFIKASTYLQHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   + D    RVN+D+ N + NL SR+   I K  DG +    A T S+ ++ 
Sbjct: 363 LNNRIDDLDLNLDDFVARVNSDVVNKLVNLASRTAGFITKRLDGKL----ADTLSEPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449
           +  +   + I E  +N+   RA+ ++++L  E +RY D + PW + K     A    V  
Sbjct: 419 ATFTSASERIAEAYENREFSRAIREIMALADEANRYVDEKAPWVIAKQEGQEAELSAVCS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            T+ + R L   L+  +P+LA +    L V      +  ++Q L         F  +F R
Sbjct: 479 TTLNLFRVLMTYLKPVMPELAARAEAFLNVT---LNWNDIEQPLLA--HNVAPFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|50120348|ref|YP_049515.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|68565978|sp|Q6D7B6|SYM_ERWCT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49610874|emb|CAG74319.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 676

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 131/541 (24%), Positives = 232/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E + AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGIAPEQMIAAMSQEHQQDFAGFNISYDNYHSTHSEENRELSGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++  + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSTTELIEPKSAVSGATPEM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+ +   L +  G      FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDDFWKKDSDADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGKLADK----LADAELY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I E   ++   RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAGASIAEAYSSRESGRAIREIMALADIANRYVDEQAPWVVAKVEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + ++   L     ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPALTQRTEAFLNTE---LSWDAITTPLLS-HQVN-PFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|262171953|ref|ZP_06039631.1| methionyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893029|gb|EEY39015.1| methionyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 683

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFDEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQIAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLVTYLKPVMPALAERTEAFLN---QELTWEGIATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|268590249|ref|ZP_06124470.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314533|gb|EFE54986.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 675

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 131/540 (24%), Positives = 237/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +  +   ++  ++      ISYD++  T  + +     +++ K+ + G I     S
Sbjct: 67  GVTPEEMIAAVNQEHQNDFAGFAISYDNYHSTHSEENKVLSELIYGKLKNNGFIKNRTIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------WM 160
             +      +  D            E   G + +  +A ++P +                
Sbjct: 127 QLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSVISGATPVMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G +I
Sbjct: 187 DSEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +  G     +FW  +      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDFDEFWNKNSKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSQYRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D  ++ +   +RVN+D+ N + NL SR+   I K +DG +        ++  +  
Sbjct: 364 SSRIDDIDFNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFDGKLSA----NLAEPELYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 + I E+  N+  ++A+ ++++L    +RY D + PW + K          +  +
Sbjct: 420 QFVDAAKVIGEDYNNREYNKAIREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  +    L        + +++  L         F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPGLTKRAEAFLN---SELSWDAINTPLL--NHSVAPFKALFNRI 534


>gi|162419184|ref|YP_001607553.1| methionyl-tRNA synthetase [Yersinia pestis Angola]
 gi|226710943|sp|A9R2M7|SYM_YERPG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|162351999|gb|ABX85947.1| methionyl-tRNA synthetase [Yersinia pestis Angola]
          Length = 675

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 137/541 (25%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHSITA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|332045074|gb|EGI81267.1| methionyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 697

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 139/547 (25%), Positives = 246/547 (44%), Gaps = 43/547 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV F  G+DEHG  I   A+
Sbjct: 14  KRYTITAALPYTNGPIHIGHLAGVYVPADIYARYKRLTGNDVAFICGSDEHGVPITIKAK 73

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+  +  +D  +   I++D++ RT+ K HHDT    +K + DK +  +  
Sbjct: 74  KEGVTPQQIVDRYHKIIKDSFEDFGITFDNYSRTSAKIHHDTASEFFKTLYDKNEFVEEV 133

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------------ 160
               Y      +  D  V             G   +     HN    +            
Sbjct: 134 SEQLYDAEANQFLADRFVIGTCPKCGNEESYGDQCEKCGTSHNATDLINPKSAITGNVPT 193

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E + +F  L+ ++  L  +     +         +V S++  GL+  +++R   DWGI
Sbjct: 194 LKETKHWFLPLNKHEQFLKDWILEGHKKDWKPNVYGQVKSWIDDGLRPRAVTRD-LDWGI 252

Query: 219 KIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P       ++YVW DA   Y++ T      +G   + +  D     +H IGKD + FH
Sbjct: 253 PVPVPGGEGKVLYVWFDAPIGYISATKEWAAREGKDWEPYWKDEDTKLVHFIGKDNIVFH 312

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V ++ F+  +G K+S S    +   E +++     D LRY 
Sbjct: 313 CIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLPEYLQDFPNKQDVLRYA 372

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R V +  K Y+G++P PG ++  D+
Sbjct: 373 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGIVPKPGEYSSVDQ 432

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L+  +     I  +++      A  ++++L    ++Y   ++PW+L KT+ +R  T++
Sbjct: 433 ETLAAINAYPSVIESSLERYRFREASQELMNLARLGNKYLADEEPWKLIKTDGERTKTIM 492

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR---LKPGFMLHKTF 503
           +V +++   LAIL + F+P  + K+  IL   +  E + +  +      L     + K  
Sbjct: 493 FVALQIASALAILSEPFLPFTSAKLKSILAFNNLAEAQNWTDVSSNEILLPTDHQIGK-G 551

Query: 504 DPIFPRF 510
           + +F + 
Sbjct: 552 ELLFSKI 558


>gi|13786940|pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase
           Complexed With Methionine
          Length = 551

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 303 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 362

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 363 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 419 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 479 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|22126527|ref|NP_669950.1| methionyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441236|ref|NP_992775.1| methionyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806813|ref|YP_650729.1| methionyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812619|ref|YP_648386.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598738|ref|YP_001162814.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366443|ref|ZP_01888477.1| methionyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947488|ref|YP_001401424.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165924586|ref|ZP_02220418.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939604|ref|ZP_02228149.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009161|ref|ZP_02230059.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211334|ref|ZP_02237369.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400168|ref|ZP_02305681.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421769|ref|ZP_02313522.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424220|ref|ZP_02315973.1| methionyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218928663|ref|YP_002346538.1| methionyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229841503|ref|ZP_04461662.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843614|ref|ZP_04463757.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894284|ref|ZP_04509467.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229903014|ref|ZP_04518130.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270486805|ref|ZP_06203879.1| methionine--tRNA ligase [Yersinia pestis KIM D27]
 gi|25009377|sp|Q8ZG01|SYM_YERPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122980066|sp|Q1CGU4|SYM_YERPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123372633|sp|Q1C9T8|SYM_YERPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187653901|sp|A7FJJ6|SYM_YERP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187653902|sp|A4TKM9|SYM_YERPP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21959527|gb|AAM86201.1|AE013867_4 methionine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436096|gb|AAS61652.1| methionyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108776267|gb|ABG18786.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778726|gb|ABG12784.1| methionyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347274|emb|CAL20168.1| methionyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210434|gb|ABP39841.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149290817|gb|EDM40892.1| methionyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958983|gb|ABS46444.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165912520|gb|EDR31152.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923646|gb|EDR40778.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991716|gb|EDR44017.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207105|gb|EDR51585.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960254|gb|EDR56275.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050117|gb|EDR61525.1| methionyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057069|gb|EDR66832.1| methionyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679924|gb|EEO76024.1| methionyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689222|gb|EEO81285.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697869|gb|EEO87916.1| methionyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229703682|gb|EEO90698.1| methionyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|270335309|gb|EFA46086.1| methionine--tRNA ligase [Yersinia pestis KIM D27]
 gi|320015607|gb|ADV99178.1| methionyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 675

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 137/541 (25%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHSITA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|239996319|ref|ZP_04716843.1| methionyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 675

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 228/543 (41%), Gaps = 46/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ ++ +++A+ Y N   H+GH  E I  D+  RF RL G +       D HG  +  
Sbjct: 1   MSEKRRILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRLRGNECYSVCADDAHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +  V +             + YD++  T    +   C  ++ ++ + G I 
Sbjct: 61  KAQELGITPEEMVARTRAEHHQDLVDFHVDYDNYYVTHSPENKALCEEIYTRLDNAGYIS 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ----------- 158
           K   +  +    E +  D            E   G       A ++P +           
Sbjct: 121 KRTINQLFDPEKEMFLPDRFVKGTCPSCGAEDQNGDSCDVCGATYSPTEVKNPRSVVSGA 180

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L  ++  L  +  S     L  E  N++  +   GL+   +SR    
Sbjct: 181 TPVLRESEHFFFDLPKFEGMLKEWIRSGA---LQEEMANKLQEWFTEGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y+ +   + D  +     FW AD      H IGKDI  
Sbjct: 238 FGFEIPGAPNKFFYVWVDAPVGYMASFKNFCDQNNLEFDDFWKADSEAELYHFIGKDITY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L  A    P  V  HGF+   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHCLFWPAMLEGAGYRKPTGVNIHGFVTVNGAKMSKSRGTFIKGRTYLDHLNPEYLRYYF 357

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++     D   +     ++VN+DL   + N+ SR  S I K +DG +         + 
Sbjct: 358 ASKLGDGVTDIDLNFTDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSE----NVIEP 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446
            +++      + I    + +  H+A+ ++++L  + +++ D   PW   K    +  T  
Sbjct: 414 ELIAEFQNASESIAALFEKRKYHQAVREIMALADKANQFIDNNAPWVTIKDEAKQQFTHD 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + + + R L I L+  +P LA K  + L    +   + SL   LK G  ++K F P+
Sbjct: 474 VCSLGINMFRLLVIYLKPVLPVLAEKAEEFLN---DKFDWNSLQTLLK-GHAINK-FKPM 528

Query: 507 FPR 509
             R
Sbjct: 529 MQR 531


>gi|16273191|ref|NP_439429.1| methionyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581399|ref|ZP_05849213.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174532|sp|P43828|SYM_HAEIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1574731|gb|AAC22924.1| methionyl-tRNA synthetase (metG) [Haemophilus influenzae Rd KW20]
 gi|260091941|gb|EEW75890.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 682

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 237/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +   + ++P+  +        
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L A++  L  +  S     L  E  N++  + +S L+   +SR   
Sbjct: 181 TTPIVKESEHFFFDLPAFEGMLKEWTRSGS---LQSEIANKMQEWFESDLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
            +G +IP       YVW+DA   Y+ +   L N +G     + A+       H IGKDI+
Sbjct: 238 YFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  +    P  VF+HG++   G K+SKS G  I     +  +  + LRY+
Sbjct: 298 YFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D  ++ +   +RVN D+ N + NL SR+   I K ++G +         D
Sbjct: 358 YAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           +S+ +  +   ++I    +++  ++ + ++++L  + ++Y D + PW + K         
Sbjct: 414 KSLFAEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +E+ R L   L+  +PKLA +    L        + ++ Q L  G  L   F  
Sbjct: 474 AVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAE---LRWDNIHQPLL-GHTL-APFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|186894958|ref|YP_001872070.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|226710942|sp|B2JZK3|SYM_YERPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|186697984|gb|ACC88613.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 675

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 137/541 (25%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHSITA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|237711556|ref|ZP_04542037.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229454251|gb|EEO59972.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 680

 Score =  347 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DK +
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRQMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|6730520|pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli
          Length = 551

 Score =  347 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 244/542 (45%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 5   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 65  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 124

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 125 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 184

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 185 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 242 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 302 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 361

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D ++
Sbjct: 362 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPAL 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 418 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQAGRDADLQAIC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 478 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|327483748|gb|AEA78155.1| Methionyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 683

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|319900739|ref|YP_004160467.1| methionyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415770|gb|ADV42881.1| methionyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 680

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 245/544 (45%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEEVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     +   +   IS+D + RT+ K HHDT    ++K+ +KG+
Sbjct: 61  TIRAKKEGVTPQDVVDRYHTLIKKSFEDFGISFDVYSRTSSKTHHDTASDFFRKLYEKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAKQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  +++ L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDKHENWLRRWILEEHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPESWEKWWKDPETRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG++P     T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALQLTKKYFDGVVPAAAGLTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 419 DRETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  ++K+  +L +   +         L  G  L  T D +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSDKLRKMLNMDSFDWAELGHTDLLPAGHRLG-TPDLL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|18977402|ref|NP_578759.1| methionyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|25009366|sp|Q8U221|SYM_PYRFU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18893089|gb|AAL81154.1| methionyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 724

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 138/553 (24%), Positives = 255/553 (46%), Gaps = 57/553 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  ++ A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I+  A N
Sbjct: 3   RYMVTAALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALN 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + +  VD+   + +     + IS+D F RT    H+   +  + K  + G + K   
Sbjct: 63  EKRSPREIVDEFHEHIKTAFQRVKISFDYFGRTELPVHYRLSQEFFLKALENGYLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                      NP+ +
Sbjct: 123 KQAYCEHDKRFLPDRFVIGTCPYCGAENQRGDQCEVCGRPLTPEILIEPRCAFCKNPITF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E   Y+ ++  +++KL  + +           +N V+ +++ GL++ +++R   DWGI 
Sbjct: 183 RESTHYYIKMQEFEEKLKEWIKEKDWK---PNVKNMVLGWIEEGLEERAITRD-LDWGIP 238

Query: 220 IPDDPQ----YIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPADL-------HVIGKD 266
           +P D +     ++YVW +A   Y+  T   +      ++ K +  +L       H IGKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISLTIEYFKRIGKPNEWKKYWLNLDGQTRVIHFIGKD 298

Query: 267 ILRFHAIYWPAFLL----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL+           A   LP  + ++ ++  +G+K S S    I   E 
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWIHEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG+
Sbjct: 359 LDVFPADYLRYYLTSIMPETRDSDFSFAEFKTKINEELVNVLGNFVYRALTFVNRYFDGI 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   E D   L    +  +E+ + ++      AL +V++L    +RYFD ++PW+ 
Sbjct: 419 VPERGELDELDRQALEEIEKTFEEVGKLIREYRFKDALKKVMNLAGFGNRYFDYKEPWKT 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            K +  R  T + +++++++ L ILL+ F+P  + KI+  L + +E + ++     L  G
Sbjct: 479 IKEDKTRTGTTINISLQIVKALGILLEPFLPDASEKIWHFLNL-EEVKTWR--FTELPAG 535

Query: 497 FMLHKTFDPIFPR 509
             + K  + +F +
Sbjct: 536 HKVRKP-EILFKK 547


>gi|37525501|ref|NP_928845.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|68565992|sp|Q7N6J6|SYM_PHOLL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|36784929|emb|CAE13847.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 675

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGKEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   ++          +SYD++  T  + +      ++ ++   G I     
Sbjct: 66  MGIAPEEMIATVNQEHHQDFTGFSVSYDNYHSTHSEENQTLSTKIYLELKKNGHIKNRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QW 159
           S  Y      +  D            E   G + +   + ++P               + 
Sbjct: 126 SQLYDPEKNMFLPDRFVKGSCPKCKAEDQYGDNCEVCGSTYSPTELINPRSAVSGATPEM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R    +G +
Sbjct: 186 RETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L +  G  +  +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMGSFQNLCDKRGNLNFDEFWAKDSTADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSGYRKPTNVFVHGYVTVNGAKMSKSRGTFIKASTYLDHLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVN+D+ N + NL SR+   I K ++G +        +D ++ 
Sbjct: 363 LSARIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFNGKLADK----LADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                  + I E   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 QQFIDGAKVIAEEFNNREFSKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P LA +    L        +  ++Q L     +   F  +F R
Sbjct: 479 MGINLFRVLMTFLKPVLPSLAERAEAFLNTE---LTWHGIEQPLL-DHQVSA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|288940932|ref|YP_003443172.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896304|gb|ADC62140.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 683

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 125/544 (22%), Positives = 234/544 (43%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +   + I++A+ Y N   HIGH  E I  D+ ARF ++ G +  +    D HG  I  
Sbjct: 1   MSQPRDILITSALPYANGPIHIGHLVEYIQTDIWARFQKMRGHNCWYVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  + + +   +       + +D++  T    +     +++++  D G I 
Sbjct: 61  RARQEGITPEQLIARVAEEHQADFAAFRVGFDNYHSTHSPENQHYATLIYERNRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
           K   +  Y   ++ +  D  +             G + +   A ++P +           
Sbjct: 121 KRMITQAYDPVEQMFLPDRFIKGECPKCGAPDQYGDNCEACGASYSPAELKNPRSAVSGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + YFFRL  ++  L  +        L  E  N++  + ++GL++  +SR    
Sbjct: 181 VPEQRESDHYFFRLGDFETMLKEWTRGGS---LQKEVANKLDEWFEAGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+
Sbjct: 238 FGFEIPDHPGKFFYVWLDAPIGYMASFQNLCDKTPGLDFDRFWGRDSTAELYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA+++PA L  A    P  +F+HGF+   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 YFHALFFPAMLHGAGFRTPSAIFAHGFLTVDGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  +   D   + +    RVNADL   + N+ SR    I K +DG +    +   ++
Sbjct: 358 FAAKLGSSVDDIDLNLEDFTARVNADLVGKVVNIASRCAGFIGKRFDGRL----SGALAE 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             + +        I    + +   RA+ ++++L    ++Y D + PW + K +       
Sbjct: 414 PELFAEFIAAGDSIAAAYEKREFSRAVREIMALADRANQYIDEKAPWVVAKQDGREAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + + + R L   L+  +P  A +    L +  +   +++L   L     +   F P
Sbjct: 474 DICSMGLNLFRVLIGYLRPILPATAAESESFLRI--DPLTWEALATPLI--DHVIAPFKP 529

Query: 506 IFPR 509
           +  R
Sbjct: 530 LMTR 533


>gi|15602168|ref|NP_245240.1| methionyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431880|sp|P57838|SYM_PASMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|12720538|gb|AAK02387.1| MetG [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 682

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 136/538 (25%), Positives = 235/538 (43%), Gaps = 49/538 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   A   G
Sbjct: 8   ILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPIMLNADKLG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  + ++  +     +  +ISYD++  T    +      ++KK+   G I     S 
Sbjct: 68  ITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQ 127

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------------E 161
            +      +  D            E   G + +  ++ ++P + +              E
Sbjct: 128 LFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLKE 187

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L A++  L ++ +S     L  E  N++  + +SGL+   +SR    +G KIP
Sbjct: 188 SEHFFFDLPAFEGMLKAWIKSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGFKIP 244

Query: 222 DDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +     D    +   FW  D      H IGKDI+ FH+++W
Sbjct: 245 DTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYFHSLFW 304

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IA 334
           PA L   +L  P  VF+HG++   G K+SKS G  I     +  +  + LRY+   +   
Sbjct: 305 PAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLNN 364

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D   + +   +R+NAD+ N   NL SRS   I K +DG +    A  E    +L+  
Sbjct: 365 RIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIAEPE----LLAEF 420

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
                +I    + +   + + +V+ L  + ++Y D + PW + K          V  + +
Sbjct: 421 VEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREAELQAVCSMAL 480

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-----LDQRLKPGFMLHKTFDP 505
           ++ R LAI L+  +P++  +    L    +   ++S     L+  + P   L +  DP
Sbjct: 481 QLFRVLAIYLKPVIPQIIARAEAFLQ---DELTWESLNRPLLNHAILPFKALAQRLDP 535


>gi|198274029|ref|ZP_03206561.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135]
 gi|198273107|gb|EDY97376.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135]
          Length = 680

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 138/544 (25%), Positives = 242/544 (44%), Gaps = 40/544 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+     +D      IS+D + RT+   HH      ++K+ DK +  
Sbjct: 63  RAKKEGVTPQDIVDRYHTLIKDSFKEFGISFDVYGRTSSPTHHQLASDFFRKLYDKHEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y      +  D  +             G   +   +  +P +           
Sbjct: 123 EKTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 QPVMKETKHWYLPLDKHEGWLRKWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLIHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LRY 
Sbjct: 301 CIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G   + D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPACGELNDYDH 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V +E+ + +       A  + ++L    ++Y    +PW+L KT+  R +T+L
Sbjct: 421 ETLKEFADVKEEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARVATIL 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPI 506
            ++++++  LAI  + F+P  + K+  +L +  E+  ++ L     L  G  L+K  + +
Sbjct: 481 NISLQLVANLAIAFEPFLPFSSEKLRKMLNM--ESFDWEQLGRTDLLAEGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|265752983|ref|ZP_06088552.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263236169|gb|EEZ21664.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 680

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DK +
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRQMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|261211930|ref|ZP_05926216.1| methionyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838538|gb|EEX65189.1| methionyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 683

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFEAREFGRAVREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|212712130|ref|ZP_03320258.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM
           30120]
 gi|212685177|gb|EEB44705.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM
           30120]
          Length = 675

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 131/540 (24%), Positives = 236/540 (43%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ  
Sbjct: 7   KLLVTCALPYANGSIHLGHILEHIQADIWVRYQRMRGKEVHFICADDAHGTPIMLKAQQL 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +  +   ++  ++      ISYD++  T  + + +   +++ K+ + G I     S
Sbjct: 67  CITPEEMIAAMNQEHQNDFAGFQISYDNYHSTHSEENKELSELIYGKLKNNGFIKNKTIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQW--------------M 160
             Y      +  D            E   G + +  +A ++P                  
Sbjct: 127 QLYDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTDLINPRSVVSGATPVIR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   ++R +  +G +I
Sbjct: 187 ETEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDSPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFKNLCDKRSDLNFDEFWNKDSKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +N   P  +F HG++   G K+SKS G  I     ++    D LRY+   ++
Sbjct: 304 FWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFITARSYLDHFDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K + G +        ++  +  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFIAKRFAGKLSA----NLAEPELYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 + I ++  N+   +A+ ++++L    +RY D + PW + K          +  +
Sbjct: 420 QFVDAAKVIGDDFTNREYGKAVREIMALADIANRYVDEKAPWVVAKQEGKDQELQDICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L  ++ + L V      + +++  L         F  +F R 
Sbjct: 480 GINLFRVLMTYLKPILPSLTKRVEEFLKVE---LTWDAINTPLL--NHDVAPFKALFNRI 534


>gi|148242327|ref|YP_001227484.1| methionyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147850637|emb|CAK28131.1| Methionyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 510

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 189/507 (37%), Positives = 268/507 (52%), Gaps = 12/507 (2%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PHIG  Y  +  D LARF RL G +V+F TG DEHGQKI + A++AG+ 
Sbjct: 5   LTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAESAGID 64

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            +   DQ S  F  +     IS D FIRTT+ RH       + ++   GDI +G   GWY
Sbjct: 65  PQQHCDQISSTFASVWSQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQQGWY 124

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +  E Y +D    K A   +      P++W +E   FFRLS YQD  +    +   FI 
Sbjct: 125 CVACEEYKDD---PKEAQSPHCPIHQKPLEWRDEANLFFRLSRYQD-AIEKLIATEGFIR 180

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P  RR EV +FV +GL+D S+SR+   WG+ +P    +  YVW DAL  Y+T     D P
Sbjct: 181 PASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP 240

Query: 249 DGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                     WPA LHVIGKDILRFHA+YWPA  LSA + LP  VF HGF+  +G+K+ K
Sbjct: 241 ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGK 300

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GN IDP  ++E  G DA+R++L+R+I  G DG   +  L   VN DLAN IGNLV+RS
Sbjct: 301 SMGNSIDPTRLVELCGRDAVRWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRS 360

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM  K ++G+   P     S+  +       + ++  + Q    H    Q + L    +
Sbjct: 361 ISMARKWFEGVPSLPQEL-PSNHPLKQAAQAAVADVASHYQELRFHAVAEQALQLAIAAN 419

Query: 426 RYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   Q PW+  K   N D+ +  LY  +E  R + ++LQ  +P+ + ++   L     +
Sbjct: 420 GYLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQLNAPSGD 479

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   +L PG +      P+  R 
Sbjct: 480 WIELLNWGQLTPGPL--DAPSPLLQRL 504


>gi|323493149|ref|ZP_08098280.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312620|gb|EGA65753.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 686

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 231/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 64  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +    E +  D            E   G +       ++P + ++          
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDSCGETYSPTELIDPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPVGYMASFKNLCNKTEGLDFDEYWKKDSTTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E    
Sbjct: 361 AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYNE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 421 FVAAAGR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P+LA +    L    E   ++ +   L     + K F  +F
Sbjct: 477 CSVGINLFRVLMTYLKPVMPELAARTEAFLN---EELTWEGIAAPLT-DHEITK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|153215088|ref|ZP_01949805.1| methionyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114951|gb|EAY33771.1| methionyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 731

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 52  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 112 QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 171

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 232 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 288

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 289 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 348

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 349 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 408

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 409 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE---- 464

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 465 LYAEFAGATDRIAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDI 524

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 525 CTVGINLFRVLMTYLKPVMPALAERTEAFLN---QELTWEGVATPLT--DHAVTPFKALF 579

Query: 508 PRF 510
            R 
Sbjct: 580 NRI 582


>gi|326335395|ref|ZP_08201583.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692460|gb|EGD34411.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 690

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 132/547 (24%), Positives = 244/547 (44%), Gaps = 43/547 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV+F  G+DEHG  I+  A+
Sbjct: 3   KRYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVVFICGSDEHGVAISIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+ ++  +D      IS+D++ RT+   H++T    ++ + DKGD  +  
Sbjct: 63  KEGTTPQKIIDKYNKIIKDSLFAFGISFDNYSRTSLPIHYETASKFFRTLYDKGDFIEET 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------------- 159
               Y  +   +  D  V             G   +      N                 
Sbjct: 123 SEQLYDEQAGQFLADRFVIGTCPKCGNEEAYGDQCERCGTSLNATDLINPKSTLTGSKPV 182

Query: 160 -MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + + +F  L  Y D L  +     +         +V S++  GL+  +++R   DWGI
Sbjct: 183 LRKTKHWFLPLQNYSDFLEKWIIEGHKNDWKPNVYGQVKSWLDDGLRPRAVTRD-LDWGI 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P D     ++YVW DA   Y+++T      +G     +  D     +H IGKD + FH
Sbjct: 242 PVPIDGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWTPYWKDKNTKLIHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYF 328
            I +PA      +  LP+ V ++ F+  +G K+S S    +   E +EE       LRY 
Sbjct: 302 CIIFPAMLKAEGSYILPENVPANEFLNLEGSKLSTSKNWAVWLNEYLEEFPSQQDTLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           +       KD  +     + R N +L    GN ++R + +  K Y  ++PTP  F++ D+
Sbjct: 362 ITANAPETKDNDFTWKDFQARNNNELVAIYGNFINRVMVLTEKYYKNIVPTPHEFSKEDK 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            + +      Q I ++++      A  +++++    ++Y   ++PW+L K +P R  T++
Sbjct: 422 EVFAQIKEFTQRIEQSLERYRFREAQQELMNIARLGNKYLADEEPWKLIKEDPKRVETIM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSL---DQRLKPGFMLHKTF 503
           YV + +   LAI  + F+P  + K+  +L     ++   ++ +   +  +  G  + K+ 
Sbjct: 482 YVALHIATALAITSEPFLPFTSEKLKQMLHFTTMSKIPVWEDVLHSENLIPEGHTIGKSI 541

Query: 504 DPIFPRF 510
             +F + 
Sbjct: 542 L-LFEKI 547


>gi|170024779|ref|YP_001721284.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|226710944|sp|B1JPY8|SYM_YERPY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169751313|gb|ACA68831.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 675

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 232/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVN D+ N + NL SR+   I K + G +    A   +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNVDIVNKVVNLASRNAGFINKRFAGQL----ADQLADPVLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHSITA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|330446439|ref|ZP_08310091.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490630|dbj|GAA04588.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 681

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 133/541 (24%), Positives = 232/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +      DI + ++  T    + +    ++ ++ +KG I     
Sbjct: 66  MGMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYTQLKEKGFITSRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P                 
Sbjct: 126 SQLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTKSGA---LQDETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRGDLNFDEYWNKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLKHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVN+D+ N I NL SR+   I K +DG +       E    + 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPE----LY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +        I E  +++   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFVAAADRIGELYESREYGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQEICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +PKLA +    L    E   ++S+ + L     + K F  +F R
Sbjct: 479 VGINLFRVLMAYLKPVMPKLAERSEAFLN---ETLTWESIAKPLTA-HEVTK-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|302798545|ref|XP_002981032.1| hypothetical protein SELMODRAFT_154280 [Selaginella moellendorffii]
 gi|300151086|gb|EFJ17733.1| hypothetical protein SELMODRAFT_154280 [Selaginella moellendorffii]
          Length = 496

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 179/499 (35%), Positives = 257/499 (51%), Gaps = 14/499 (2%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +G AY  I AD  ARF RL G +V+F TGTDEHG+KIA AA   G   K   D  +  + 
Sbjct: 1   MGSAYPTIAADAFARFQRLQGRNVVFVTGTDEHGEKIATAAAAKGRKPKEHCDLIANEYA 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +   L+ISYD FIRTT++ H       +K++ DK DIY   Y G Y +  E Y +  ++
Sbjct: 61  SLWKDLNISYDKFIRTTDEAHERAVEQFYKRVYDKEDIYCANYEGLYCVNCEEYKDAKDL 120

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +         P    +E+ YFF LS YQ +L     + P F+ P  R NEV+ +VK
Sbjct: 121 I---EEHCCPIHRKPCVERKEKNYFFALSKYQSRLEELLSTRPAFVRPPFRMNEVLGWVK 177

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPAD 259
            GL D S+SR+  +WGI +P D +  +YVW DAL  Y++            A    WPA 
Sbjct: 178 EGLHDFSISREAVEWGIPVPTDKKQTIYVWFDALLGYISALLDGKEVTPENAAASGWPAS 237

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H+IGKDILRFHA+YWPA L SA   +P+ VF HGF+   G K+ KSLGN I+P E++  
Sbjct: 238 VHIIGKDILRFHAVYWPAMLWSAGFAIPETVFGHGFLTKDGLKMGKSLGNTIEPQELVSR 297

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            GVD++RYF + E+  G+DG Y ++     VNA LAN IGNL++R++ ++ K+    I  
Sbjct: 298 FGVDSVRYFFLNEMEFGRDGDYSEERFITIVNAHLANTIGNLLNRTLGLLKKNCASTISV 357

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                  +  +       +   +          A   ++SL +  + Y + + PW   K 
Sbjct: 358 DSESIPEENPVRVFAEAAVARAKRRYSELHFSSACEALLSLANTGNAYLEERAPWTGFKQ 417

Query: 440 NPDRASTVL----YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD----Q 491
               A+        V +E +R L++ L   VP L  +++  L   DE+    S D     
Sbjct: 418 KATPAAEAAAKDLAVILESVRILSVALSPVVPDLCKRMWLQLGYQDEHFNQISWDDTRWG 477

Query: 492 RLKPGFMLHKTFDPIFPRF 510
            LK G  L  T  P+FP+ 
Sbjct: 478 GLKAG-QLVATPSPVFPKI 495


>gi|262166073|ref|ZP_06033810.1| methionyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025789|gb|EEY44457.1| methionyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 683

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 225/543 (41%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +  G     ++W  D      H IGKDI+ F
Sbjct: 241 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  +     +  +  + LRY+  
Sbjct: 301 HSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYA 360

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +      D   + +   +RVNAD+ N I NL SR+   I K +DG +    A  E    
Sbjct: 361 AKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAQFAEPE---- 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +  +     I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 417 LYAEFAGAADRIAELFETREFGRAIREITALADKANQYVDEKAPWVVAKQESQDQALQDI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P LA +    L    +   ++ +   L         F  +F
Sbjct: 477 CTVGINLFRVLVTYLKPVMPALAERTEAFLN---QELTWEGIATPLT--DHAVTPFKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|319953400|ref|YP_004164667.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422060|gb|ADV49169.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 689

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 134/539 (24%), Positives = 243/539 (45%), Gaps = 41/539 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   +  I+ A+ Y N   HIGH A   + AD+ +R+ RL G DV F +G+DEHG  I+ 
Sbjct: 6   KNPSRYTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLIGKDVAFISGSDEHGVAISM 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T K  +D+     +       I++D++ RT+ + HH+T    +K + D+GD  
Sbjct: 66  KAKKEGITPKEVIDKYHAIIKKSFADFGITFDNYSRTSAEIHHETASEFFKTMYDQGDFI 125

Query: 121 KGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQ----------------- 158
           +      Y    + +  D          G +  Y +   N                    
Sbjct: 126 EETTEQLYDPEAKQFLADRFVVGTCPKCGYEEAYGDQCENCGSTLNATDLINPKSTISGA 185

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + +F  L  ++  L  +     +         +  S++  GLK  +++R   D
Sbjct: 186 APTVKETKHWFLPLDRHEAFLKEWILEGHKNDWKPNVYGQCKSWIDDGLKPRAVTRD-LD 244

Query: 216 WGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           WGI +P       ++YVW DA   Y+++T      +G   + +  D     +H IGKD +
Sbjct: 245 WGIPVPVPGGEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLVHFIGKDNI 304

Query: 269 RFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P+         LP  V ++ F+  +G K+S S    +   E +E+     D L
Sbjct: 305 VFHCIIFPSILKAHGGYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNMQDVL 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN ++R V +  K Y G+IPTP AF++
Sbjct: 365 RYTLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLSNKYYQGIIPTPAAFSD 424

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   L+   +  + I  +++      A  +++SL    ++Y   ++PW++ K + +R  
Sbjct: 425 IDLETLAEVKKYPEIISSSIERYRFREAGQELMSLARLGNKYLADEEPWKVIKQDEERVK 484

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHK 501
           T+++V +++   LA+L + F+P  + K+ +IL  +D    +  + ++   +  G  + +
Sbjct: 485 TIMFVALQIAEALAVLSEPFLPFTSTKLKNILH-SDAQNSWNDIAKKDVLIPAGHQIGE 542


>gi|51595871|ref|YP_070062.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|68565976|sp|Q66C72|SYM_YERPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51589153|emb|CAH20773.1| methionyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
          Length = 675

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 136/541 (25%), Positives = 232/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G I     
Sbjct: 66  MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGYIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +   A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K + G +        +D  + 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLADQ----LADPVLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGHDADLHAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L        + S++Q L  G  +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHSITA-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|320100795|ref|YP_004176387.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753147|gb|ADV64905.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 514

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 174/480 (36%), Positives = 258/480 (53%), Gaps = 13/480 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I YPNA PHIGHAY  + ADVLARF+RL G +V F TG DEHG KI + A+ AG
Sbjct: 9   FYVTTPIYYPNAPPHIGHAYTSVFADVLARFNRLIGNNVFFLTGNDEHGLKIQRVAEKAG 68

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              K FVD+ +  +R+    L ISYD FIRTT+  H    +  +  I  KG IYK  YSG
Sbjct: 69  KHPKEFVDEMASVYREYWRTLGISYDHFIRTTDPYHEKAVKEAFSYIHGKGLIYKAKYSG 128

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            Y +  E YY+  E  +     +    + P++++EEE Y+F+LS ++D LL   E+    
Sbjct: 129 MYCVDCEKYYSPGEYIEVDGKPHCPIHNKPLEYLEEETYYFKLSEFKDYLLDILENKDVV 188

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
                 R         GL+D+S++R      WGI +P D +Y++YVW DAL NYL+  GY
Sbjct: 189 YPQQYAREVASKIRNEGLRDVSVARPVERVGWGIPVPFDDKYVIYVWFDALMNYLSGVGY 248

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D+ +     +W    HVIGKDIL FH   W + L + +LP P++V  H +++++G KI 
Sbjct: 249 PDDKERL-QLYWSNAHHVIGKDILWFHTAVWFSILKALDLPPPRRVIVHSYLINRGLKIG 307

Query: 305 KSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           KS GNVI   E++    G D +RY L R     KD     + L    N++LA+  GNL  
Sbjct: 308 KSAGNVISIEELVSRYNGSDGVRYLLARIFNTDKDSEVSFELLDSIYNSELADTYGNLAR 367

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R  ++ +K  +G +         D+++  + +  +    ++M+N  + +AL   + +   
Sbjct: 368 RVGTLSMKKMNGKVYRRS----VDKAVADLVATHVGAYIDSMKNYEVSKALEHAMEIARY 423

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            ++Y +  KPWE  K NP +    LY  +E+IR   ILL   +P  + K+        EN
Sbjct: 424 ANQYVNESKPWE--KPNPSKE---LYTLLELIRAATILLHPVIPSASLKLASSFGFEIEN 478


>gi|85058948|ref|YP_454650.1| methionyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123725420|sp|Q2NUD0|SYM_SODGM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|84779468|dbj|BAE74245.1| methionyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 679

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 239/543 (44%), Gaps = 51/543 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  + F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQIYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +++ +   +       ISYD++  T  + +     ++++++ + G I     
Sbjct: 66  LGIAPEEMINEMNLEHQTDFAGFGISYDNYHSTHSEENQQLSTLIYQRLKENGFIKSRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  +      +  D  V             G + +   A +NP                 
Sbjct: 126 SQLFDPEKVMFLPDRFVKGSCPKCHSPDQYGDNCEVCGATYNPTDLINPKSAVSGTTPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ + + ++  S     L  +  N++  + +SGL++  +SR    +G +
Sbjct: 186 RESEHFFFDLPAFSEMMRAWTRSGA---LQEQVANKMQEWFESGLQEWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           +PD P    YVW+DA   Y++    L          +FW  D      H IGKDI+ FH+
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMSAFQNLCQKRSDLRFDEFWDVDSKADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG++   G K+SKS G  I     +  +  + LRY+   +
Sbjct: 303 LFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLAHLDAECLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K +DG +    A T +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGFINKRFDGQL----AATVADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +        I +   ++   RA+ ++++L    +RY D Q PW + K     A    +  
Sbjct: 419 ATFVNAATSIGDAFSSRETSRAIREIMALADLANRYVDEQAPWVVAKQEGREADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHKTFDPIF 507
           + +++ R L   L+  +P LA +    L    +     +  L  R++P       F  +F
Sbjct: 479 MGIQLFRVLMTYLKPVLPSLAERAKAFLATPLDWDDLSAPLLSHRIRP-------FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 SRI 534


>gi|209695662|ref|YP_002263591.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710892|sp|B6EIY5|SYM_ALISL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|208009614|emb|CAQ79910.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 686

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 228/544 (41%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  K+ ++ A+ Y N   H+GH  E I AD+  R+ RL G D+ F    D HG  I   
Sbjct: 3   TDPRKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNDINFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASSIYLELKKNGFITS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  +    E +  D            E   G +       ++P              
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEEQYGDNCDNCGETYSPTDLINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +
Sbjct: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILR 269
           G +IP +     YVW+DA   Y+ +   L +        ++W  +      H IGKDI+ 
Sbjct: 240 GFEIPGETNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKLNSTTELYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  VF HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 300 FHSLFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVN+D+ N I NL SR+   I K +DG +       E   
Sbjct: 360 AAKLNSRIDDIDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLSDNFVAPELYN 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
             ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW L K          
Sbjct: 420 EFVAASDR----IAELYETREFSRAIREITALADKANQYIDEKAPWVLAKEEGKEQELQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P+LA +    L    E   ++ + Q L     + K F  +
Sbjct: 476 VASVGINLFRVLMAYLKPVMPELAARTEAFLN---ETLTWECIAQPLTS-HEITK-FKAL 530

Query: 507 FPRF 510
           F R 
Sbjct: 531 FNRI 534


>gi|313204253|ref|YP_004042910.1| methionyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443569|gb|ADQ79925.1| methionyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 679

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 142/543 (26%), Positives = 241/543 (44%), Gaps = 36/543 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  +++A+ Y N   HIGH A   + AD+  R+ RL G +VLF  G+DEHG  I 
Sbjct: 1   MTNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKGEEVLFVGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +   +   IS+D + RTT K H +    ++K I+DK   
Sbjct: 61  IKAKKEGVTPQDIVDRYHGIIKKSFEDFGISFDIYSRTTSKTHKELASEIFKTINDKDGF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ---------- 158
                  +Y    + +  D  +             G   +      NP            
Sbjct: 121 VIQTSEQYYDETAQQFLADRYITGKCPHCGNENAYGDQCEACGTSLNPTDLINPKSAISG 180

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   
Sbjct: 181 SAPVMRETKHWYLPLDQHEAWLRQWILEDHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-L 238

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRF 270
           DWGI +P +     ++YVW DA   Y++ T  L      K    P    LH IGKD + F
Sbjct: 239 DWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLLHFIGKDNIVF 298

Query: 271 HAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRY 327
           H I +PA      +  LP  V ++ F+  +G+KIS S    +   E +EE     D LRY
Sbjct: 299 HCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLRY 358

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     + R N +L    GN ++R++ +  K YDG +P  G  T+ D
Sbjct: 359 VLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRALVLTQKYYDGKVPALGQLTDYD 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  L     V  ++ + + N     A  + ++L    ++Y    +PW++ KT+ DR ST+
Sbjct: 419 KQTLDEFVNVKADVEKLLNNFRFRDAQKEAMNLARIGNKYLADTEPWKVAKTDMDRVSTI 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           +++++++   LAI  + F+P  + K+  +L ++  +         LK G  L  T + +F
Sbjct: 479 MHLSLQIAANLAIAFEPFLPFTSEKLRTMLNLSTFDWKELGRIDLLKAGDQLG-TPELLF 537

Query: 508 PRF 510
            + 
Sbjct: 538 EKI 540


>gi|298385978|ref|ZP_06995535.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261206|gb|EFI04073.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 679

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 240/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     +   +   +S+D + RTT K HH+     +K + +KG+
Sbjct: 61  TIRAKKEGVTPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEGWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    LH IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLLHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +E+     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +D  +P     T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDSKVPACAELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +          +  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMESFEWSELGRNDLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|319640248|ref|ZP_07994973.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|317388023|gb|EFV68877.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 680

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DKG+
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAHQFLADRYITGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +   G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVSVCGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRKMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|120437425|ref|YP_863111.1| methionyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|187647722|sp|A0M5Z9|SYM_GRAFK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117579575|emb|CAL68044.1| methionyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 691

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 141/552 (25%), Positives = 250/552 (45%), Gaps = 45/552 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+ A+ Y N   HIGH A   + AD+ +RF R+ G DV F  G+DEHG  I  
Sbjct: 3   KNPQRFTITAALPYTNGPIHIGHLAGVYVPADIYSRFLRMQGYDVAFVCGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+ +   +   +   I++D++ RT+ K HHDT    +KK+ + G   
Sbjct: 63  KAKKEGVTPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM--------- 160
           +      Y      +  D  V             G   +      N    +         
Sbjct: 123 EESTEQLYDEEAGQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAITGA 182

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E   +F  L  Y+D L  +     +         +V S++  GL+  +++R   D
Sbjct: 183 VPTLKETRHWFLPLDQYEDFLKEWILKGHKSDWKSNVYGQVKSWIDDGLRARAVTRD-LD 241

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           WGI +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD +
Sbjct: 242 WGIPVPVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDENTKLVHFIGKDNI 301

Query: 269 RFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P       +  LP+ V ++ F+  +G+K+S S    +   E +EE     D L
Sbjct: 302 VFHCIIFPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVL 361

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN ++R V +  K Y+G++P PGA++E
Sbjct: 362 RYVLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYNGIVPEPGAYSE 421

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            DE  ++        I  +++      A  ++++L    ++Y   ++PW+L KT+ +R  
Sbjct: 422 IDEKTIAELKAYPSVIASSIERYRFREAQGELMNLARLGNKYLADEEPWKLIKTDEERVK 481

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR----CFQSLDQR---LKPGFM 498
           T++YV +++   L+I+ + F+P  + K+  +L   DE+      +  +  +   +  G  
Sbjct: 482 TIMYVALQIASALSIISEPFLPFTSAKLKKMLNHVDESSDNTPDWDIIGTKEALILGGHQ 541

Query: 499 LHKTFDPIFPRF 510
           + K  + +F + 
Sbjct: 542 IGKA-ELLFSKI 552


>gi|29348342|ref|NP_811845.1| methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569289|ref|ZP_04846699.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|68566005|sp|Q8A3M1|SYM_BACTN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29340246|gb|AAO78039.1| Methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841308|gb|EES69389.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 679

 Score =  345 bits (886), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 240/544 (44%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     +   +   +S+D + RTT K HH+     +K + +KG+
Sbjct: 61  TIRAKKEGVTPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y    + +  D  +             G   +      +P           
Sbjct: 121 FIEKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSKPVMKETKHWYLPLDKHEGWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    LH IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLLHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +E+     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +D  +P     T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFDSKVPACAELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T
Sbjct: 419 DKETLKEFANVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L ++++++  LAI  + F+P  + K+  +L +          +  L  G  L+K  + +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRKMLNMESFEWSELGRNDLLPVGHQLNKP-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|74005480|ref|XP_850573.1| PREDICTED: similar to methionine-tRNA synthetase 2 precursor [Canis
           familiaris]
          Length = 593

 Score =  345 bits (885), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 181/540 (33%), Positives = 274/540 (50%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD---GLDVLFTTGTDEHGQKIAKAA 62
           + + +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 44  RAFFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPSAAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     +S  DF+RTTE RH    +  W  +  +G +YKG
Sbjct: 104 AAAGLAPAELCDRVSAQFQQLFREAGVSSTDFVRTTEARHRVAVQHFWGLLEARGLLYKG 163

Query: 123 CYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   +E +  + +V +     G          +PV W +EE Y FRLS +++ L 
Sbjct: 164 LYEGWYCASEECFLPEAKVTRQPGPSGDACPVSLESGHPVSWTKEENYIFRLSQFREPLR 223

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +    P+ + P   R  V+ +++  L DLS+SR++    WGI +P D    +YVW+DAL
Sbjct: 224 RWLRDDPQAVTPEPFRLAVLQWLEEELPDLSVSRRSSHLHWGIPVPGDDSQTIYVWLDAL 283

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +        +WPA  H+IGKDIL+FHAIYWPA LL A +  P +++ H  
Sbjct: 284 VNYLTVIGYPNA---EFRAWWPATSHIIGKDILKFHAIYWPALLLGAGMSPPHRIYVHSH 340

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP   ++   VD  RYFL+R+     D  Y  + + K ++++LA
Sbjct: 341 WTVCGQKMSKSLGNVVDPKTCLDRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLDSELA 400

Query: 356 NGIGNLVSRSVSMILKD--------YDGMIPTPGAFTE------SDESILSVCSRVLQEI 401
           + +G L++R  +  +           +   P PG           D ++++  + + +++
Sbjct: 401 DALGGLLNRCTANRINPSGTYPVFCANCFPPAPGVAGPSARAQAEDYALVNAVATLPRQV 460

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQL 458
            E+  N  I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R  
Sbjct: 461 AEHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLSWESPVDAPWLGTVLHVALECLRVF 520

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
             LLQ   P LA+K+   L V+   R    L    +         G  L      +FPR 
Sbjct: 521 GTLLQPVTPSLADKLLSRLGVSATERGLGELFFLPRFYGYPCPFEGRRLGPETGLLFPRL 580


>gi|159107898|ref|XP_001704224.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157432280|gb|EDO76550.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 582

 Score =  345 bits (885), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 188/560 (33%), Positives = 293/560 (52%), Gaps = 53/560 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K+Y++T I Y N +PHIGH +  ++AD L RF +L G +    TGTDEHGQK+ ++A
Sbjct: 2   EARKVYLTTPIYYVNGKPHIGHVFTTLLADTLKRFRKLQGFETYLMTGTDEHGQKVQQSA 61

Query: 63  QNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  G+  + + D  ++ F     +   +  D F+RTT  +H +    LW+K+   G IYK
Sbjct: 62  EKMGLQPQQWCDNMAKTFETYFLENFGLCPDVFMRTTMPKHVEMATKLWEKLRTAGLIYK 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-----PVQWMEEEGYFFRLSAYQDKL 176
             Y GWY + DEA+  +  +  G D Q    + +     P  ++ EE Y FRLS++Q+ L
Sbjct: 122 DKYEGWYCVADEAFVTETNLKDGVDAQGKPCKVSAESGQPCVFLSEENYKFRLSSFQEPL 181

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDA 234
           L +Y+ +PE I+P  R+ E++SF+ SGL D+S+SR      WGI +P D  ++MYVWIDA
Sbjct: 182 LKFYQDNPEIIIPAFRQAEIVSFIHSGLHDISISRSKDKISWGIPVPGDSDHVMYVWIDA 241

Query: 235 LTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L  YLT      NPDG+  ++ WPAD+  +GKDI RFH +YW AFL+ A++P P++ F H
Sbjct: 242 LAIYLTAADSTINPDGTFSSRLWPADVQFLGKDIARFHCVYWLAFLMGASIPCPRRFFIH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+     +KI KSLGN +DP+ ++E  G+D ++YF++RE +   D    ++ +  R  +D
Sbjct: 302 GWWTINHQKIGKSLGNALDPMSLVEAYGLDGVKYFMLREGSPANDPGITEELISMRTESD 361

Query: 354 LANGIGNLVSRSVS-MILKDYDGMIPTP----------------------GAFTESDE-- 388
           LAN +GNL  R  +  +L D     P+                            +D   
Sbjct: 362 LANVLGNLTMRCTADSLLPDRAWTDPSKLFEGVSFAQIRSLWMKSRRSSIAELLPADAGE 421

Query: 389 --------------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                          +L     + +E+   M N  I  AL+++  ++  ++ Y     PW
Sbjct: 422 RENISSIIKINDISDLLDKGLAICEEVTNLMDNIDIPGALSKIFEILVGINNYIQLTMPW 481

Query: 435 ELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---L 489
            L K    +     V+Y   E++R  A LL  F+P+ A  I D L V+ E+R  +     
Sbjct: 482 VLIKKAETKNGHEFVMYCANELLRVCATLLLPFIPQKAPLILDQLGVSSEDRVIKREVLT 541

Query: 490 DQRLKPGFMLHKTFDPIFPR 509
              + PG  L +   P+FP+
Sbjct: 542 IGYIAPGLTLGEKLPPLFPK 561


>gi|269102243|ref|ZP_06154940.1| methionyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162141|gb|EEZ40637.1| methionyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 682

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 131/541 (24%), Positives = 229/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +      DI + ++  T    + +    ++ ++  +G I     
Sbjct: 66  MGMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYNQLKQQGYITSRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P                 
Sbjct: 126 SQLFDPEKEMFLPDRFVKGTCPKCGAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTKSGA---LQDETANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWNKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLQHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVN+D+ N I NL SR+   I K +DG +    A  E    + 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLAERCAEPE----LY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
           +        I    +++   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFVAAADRIGALYESREYGRAIREITALADKANQYVDEKAPWVVAKEEGKDLELQEICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +PKLA +    L    E   ++ + Q L     + K F  +F R
Sbjct: 479 MGINLFRVLMAYLKPVMPKLAERTEAFLN---ETLTWEGIAQPLTA-HEVTK-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|212695407|ref|ZP_03303535.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855]
 gi|212662042|gb|EEB22616.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855]
          Length = 680

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DK +
Sbjct: 61  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 121 FIEKTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 419 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLVKTDMDRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 479 ILNIALQLVANLAIAFEPFLPFSSEKLRQMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 537

Query: 507 FPRF 510
           F + 
Sbjct: 538 FEKI 541


>gi|117621300|ref|YP_856757.1| methionyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|187645704|sp|A0KKF6|SYM_AERHH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117562707|gb|ABK39655.1| methionyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 677

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 128/542 (23%), Positives = 220/542 (40%), Gaps = 42/542 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +   + ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   
Sbjct: 3   TDPRTMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFVCADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S+  +      +IS+D++  T    + +   +++ ++   G I  
Sbjct: 63  AQQLGITPEEMIAAVSKEHQADFAGFNISFDNYHSTHSDENRELAELIYGRLQAGGKIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------- 163
              S  +      +  D  V             G +     A ++P + ++ +       
Sbjct: 123 RTISQLFDPEKSMFLPDRFVKGTCPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGAT 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                   F     Q +            +  E  N++  + +SGL+   ++R    +G 
Sbjct: 183 PVMKDSEHFFFDLPQFEKWLAEWVRGSGAIQEEMANKMQEWFESGLQQWDITRDAPYFGF 242

Query: 219 KIPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           +IP  P    YVW+DA   Y+           D     +W AD      H IGKDI  FH
Sbjct: 243 EIPGAPGKYFYVWLDAPIGYMASFKNLCNKRRDIDFDSYWKADSEAELYHFIGKDIAYFH 302

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WP+ L  A    P KV  HG++   G K+SKS G  I     +  +  + LRY+   
Sbjct: 303 CLFWPSMLEGAGFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAA 362

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  +   D   + D    RVNAD+ N + NL SR+   I K +DG +    A T ++  +
Sbjct: 363 KLNSRIDDLDLNLDDFVARVNADVVNKLVNLASRNAGFIAKRFDGKL----AATCAEPEL 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
            +  +     I E  +++   RA+ ++++L  + +RY D + PW + K          V 
Sbjct: 419 YAEFANSRTAIAEAYESREFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVC 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V + + R L   L+  +P LA +    L    E   +  ++  L         F  +F 
Sbjct: 479 SVGINLFRVLMAYLKPVMPLLAERAEAFL---AETLSWDGIEMPLVDHT--VAPFKALFS 533

Query: 509 RF 510
           R 
Sbjct: 534 RI 535


>gi|259908021|ref|YP_002648377.1| methionyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963643|emb|CAX55140.1| Methionyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283477916|emb|CAY73832.1| metG [Erwinia pyrifoliae DSM 12163]
          Length = 676

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 126/521 (24%), Positives = 227/521 (43%), Gaps = 39/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGMAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + +E +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPNCQSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  + +  +       L  +  N++  + +SGL+   +SR    +G +IP 
Sbjct: 186 RDSEHFFFDLPEFSAMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPG 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWRQDSDAELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K + G +    A    D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSAEVA----DPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
                 I +   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 IDASNSIAQAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDAELQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            + R L   L+  +P LA +    L    +   ++ ++Q L
Sbjct: 482 NLFRVLMTWLKPVMPSLAERAETFLN---QQLSWEGIEQPL 519


>gi|320539122|ref|ZP_08038793.1| methionyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030760|gb|EFW12768.1| methionyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 675

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHEVYFICADDVHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V  +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I K   
Sbjct: 66  LSVKPEAMIAEMSQEHQQDFAGFNISYDNYHSTHSDENRELSNLIYTRLKENGFIKKRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  Y      +  D  V             G + +  +A ++P +               
Sbjct: 126 SQLYDPEKGMFLPDRFVKGNCPTCKAADQYGDNCEVCSATYSPTELIAPKSVVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  +   L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPGFSAMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+           D    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYIGSFKNLCDKRSDVDFDEFWCKDASTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG++   G K+SKS G  I     ++ +  D LRY+   +
Sbjct: 303 LFWPAMLEGSHFRKPTNLFVHGYVTVDGAKMSKSRGTFIKAGTYLQYLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVN D+ N + NL SR+   I K + G +        +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRNAGFISKRFGGQLADK----LADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                  + I +   ++   RA+ ++++L    +RY D Q PW + K         T+  
Sbjct: 419 HTFVDAAERIGDAYASREFSRAIREIMALADLANRYVDTQAPWVVAKEAGRDTDLQTICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P LA +    L        + +L Q L  G  ++  F  +F R
Sbjct: 479 MGINLFRVLMTYLKPVLPMLATRSEAFLNTE---LRWDTLQQPLL-GHQIN-VFSTLFKR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|297153868|gb|ADI03580.1| methionyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 507

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 187/520 (35%), Positives = 279/520 (53%), Gaps = 37/520 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + YI+T I Y NA+PH+G A E++ AD LAR HR  G  V   +GTD++  K   AA+ 
Sbjct: 4   PRRYITTTIPYVNARPHLGFALELVQADTLARHHRRRGEQVRLLSGTDDNSLKNVLAAEA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGC 123
           AG   + FVD+N+  F  +   L +S+DDFIRT+ + RH      LW++ +  GD+Y+  
Sbjct: 64  AGTDVQSFVDRNADAFAALRGPLALSFDDFIRTSSDPRHRVGVERLWRRCAASGDLYRRE 123

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G Y +  E +Y  DE+  G  G+         Q + EE +FFRLS Y  +L     S 
Sbjct: 124 YEGLYCVGCEQFYTPDELVDGRCGE----HGTEPQLVTEENWFFRLSRYAGRLHQLISSG 179

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
              I P+ RRNEV++ V+ GL D S+SR   +   WGI +P+DP  ++YVW DAL NY+T
Sbjct: 180 DLRIEPVARRNEVLALVEGGLHDFSVSRSHSRARGWGIPVPEDPSQVVYVWWDALGNYVT 239

Query: 241 TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           + GY  +   +  ++W      +H++GK ++RFHA+YWPA LLSA LPLP  +  H ++ 
Sbjct: 240 SLGYGTDDT-AYDQWWATSERRVHLVGKGVVRFHAVYWPAMLLSAGLPLPTDILVHDYLT 298

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G KISKS G  +DP  +    G DA+R++L+R++    D  +  D L  R +AD A G
Sbjct: 299 VDGRKISKSAGTTVDPAALAAAHGTDAVRWWLLRDVPRIGDADFTPDRLTGRADADFAGG 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GNL+ R V+M+ +   G +P     +    +++ VC +V   +   + +    RA+  V
Sbjct: 359 LGNLIHRIVTMVHRFRGGTVPVSAPSSGL--ALVDVCRKVPGLVDAALADFDFRRAIRAV 416

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPD-------RASTVLYVTVEVIRQLAILLQAFVPKLA 470
            ++V E +R  DA +PWEL +           R  TVL   V   R LA  L++F+P  A
Sbjct: 417 WNIVEEANRCIDATRPWELARAERQGDGEAAKRLDTVLVTLVTACRVLADELRSFIPDAA 476

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +I   L           ++ RL           P+FPR 
Sbjct: 477 TRIAAQL---------TPVEGRLPAA-------QPLFPRL 500


>gi|260779289|ref|ZP_05888181.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605453|gb|EEX31748.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 712

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 231/543 (42%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 30  DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I   
Sbjct: 90  QQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASRIYLELKKNGFISSR 149

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +    E +  D            E   G +       ++P + ++          
Sbjct: 150 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATP 209

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G
Sbjct: 210 VMKDSEHFFFDLPQFESMLQEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFG 266

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ F
Sbjct: 267 FEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYF 326

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  +    P  VF HG++   G K+SKS G  I     +  +  + LRY+  
Sbjct: 327 HSLFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAATYLNHLDPECLRYYYA 386

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G + +     E    
Sbjct: 387 AKLNSRIDDLDLNLEDFIQRVNADVVNKIVNLASRNAGFITKRFEGKLSSEFVEPELYNE 446

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +
Sbjct: 447 FVAAADR----IAELFETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDI 502

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + R L   L+  +P+LA +    L    E   ++ +   L  G  + K F  +F
Sbjct: 503 CSVGINLFRVLMTYLKPVMPELAARTEGFLN---EELTWEGIAAPLT-GHEITK-FKALF 557

Query: 508 PRF 510
            R 
Sbjct: 558 NRI 560


>gi|84488913|ref|YP_447145.1| methionyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|121725522|sp|Q2NI31|SYM_METST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|84372232|gb|ABC56502.1| MetG [Methanosphaera stadtmanae DSM 3091]
          Length = 676

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 139/546 (25%), Positives = 243/546 (44%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           KL+IS A+ Y N   H+GH     I AD+ AR++R+ G+D L    TDEHG  IA  A+ 
Sbjct: 3   KLFISCALPYANGPCHLGHLRSTYIPADIYARYNRMTGVDTLMVCSTDEHGTPIAVRAEQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                K   D       +     +IS D F RTT++ H+   +  +  + +KG IY+   
Sbjct: 63  EKKNPKDITDIYHEIIGNDLKSCNISLDSFRRTTDEIHYKMAQDFFLDLYNKGYIYEKVI 122

Query: 125 SGWYSLRD-----------EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y                  Y + E  +G   +      NP   +E        + + 
Sbjct: 123 DQLYCDECKRSLPDRYVEGTCPYCESEGARGDQCEVCGRHLNPTDLVEPHCLICDSTPHI 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           ++   YY              +    LP   +N    ++  GLKD  ++R   +WGI +P
Sbjct: 183 EQSKQYYFKLHEFEQPLKEWINSNEHLPKNVKNFAKEWLNDGLKDWIMTRD-MNWGIPVP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPA 277
            +     ++YVW +A   Y ++     N      K +  D  +H IGKDI+  H ++WP+
Sbjct: 242 LNDAEGKVLYVWAEAFEGYQSSAASWANKHDLDWKEYWDDKTVHFIGKDIIYHHTLFWPS 301

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L+     LP  V   G++  +G K+S S G VI   + +++   D LRY++V      K
Sbjct: 302 MLMGRGWNLPYSVVGGGYLSLEGRKMSTSKGWVIWVEDFLKKFDSDLLRYYMVINAPLNK 361

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +  D  ++RVN +L + +GN + R+ +   K +DG IP  G++T+ D+        +
Sbjct: 362 DTDFSWDDFQRRVNNELTDNLGNFIHRTFTFTNKFFDGKIPEMGSYTDEDKEFEEKIKAL 421

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
              +   + N      L  ++SL  E ++YF+ +KPW+  K + + A T + ++ +++  
Sbjct: 422 PDVVANYIDNFQFREGLQGIMSLTKEANKYFNDKKPWKGVKEDIESAKTCINLSNQLVHV 481

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC-------------FQSLDQRLKPGFMLHKTFD 504
           L+I+L  ++P    KI  +L +  E+               +    + L  G+ ++    
Sbjct: 482 LSIVLTPYIPISVQKIRKVLNMPTEHVDGFMKFEERTPLVKWDEAKEFLPAGYEINSA-K 540

Query: 505 PIFPRF 510
           P+F + 
Sbjct: 541 PLFSKI 546


>gi|86130965|ref|ZP_01049564.1| Methionyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818376|gb|EAQ39536.1| Methionyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 695

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 148/545 (27%), Positives = 240/545 (44%), Gaps = 45/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M +   +  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DV F  G+DEHG  I
Sbjct: 1   MSQNPQRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGADVAFICGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+ +   +   +   I++D++ RT+ K HHDT    +K + D+G 
Sbjct: 61  TIKAKKEGVTPQDVVDKYNAIIKKSFEDFGITFDNYSRTSAKIHHDTASEFFKNMYDQGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------- 160
             +      Y      +  D  V             G   +     HN    +       
Sbjct: 121 FIEETNEQLYDAEANQFLADRFVTGTCPKCGYEEAYGDQCESCGTSHNATDLINPKSAIT 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + +F  L  Y D    +     +         +  S++  GL+  +++R  
Sbjct: 181 GAVPTLKETKHWFLPLDQYNDFFKEWIIKGHKKDWKTNVYGQCKSWIDDGLRPRAVTRD- 239

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI IP +     ++YVW DA   Y+++T      +G   + +  D     LH IGKD
Sbjct: 240 LDWGIPIPVEGADGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLLHFIGKD 299

Query: 267 ILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VD 323
            + FH + +PA L       LP  V ++ F+  +G K+S S    +   E +EE     D
Sbjct: 300 NIVFHCLIFPAMLKGHGEYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEEFPDQQD 359

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N++L    GN ++R   +  K YDG IP PGAF
Sbjct: 360 VLRYVLTANAPESKDNDFTWKDFQTRNNSELVAIFGNFINRVTVLTHKYYDGAIPEPGAF 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
              D  +L         I  +++      +  + ++L    ++Y   ++PW+  KT+ +R
Sbjct: 420 NALDTEVLDAIKAYPAVIGSSIEKYRFRESQTEFMNLARLGNKYLADEEPWKTIKTDVER 479

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADENR----CFQSLDQRLKPG 496
             TV+YV +++   L++L +  +P  + K+ DIL V   ADEN        S +  L  G
Sbjct: 480 TKTVMYVALQIAAALSVLSEPLLPHTSGKLKDILNVNSSADENALQWSDISSKEVLLPAG 539

Query: 497 FMLHK 501
             ++K
Sbjct: 540 HTINK 544


>gi|218259406|ref|ZP_03475150.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225135|gb|EEC97785.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii
           DSM 18315]
          Length = 679

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 236/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   H       ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGISFDIYSRTTSATHRQVASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 QPVMKETKHWYLPLDKWEPFLRQWILEGHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P D     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVDGAEGKVLYVWFDAPIGYISNTKELLPESWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPAMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTEKYFEGKVPAAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L+  + V  ++   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLTDFANVKADVERLLDTYHFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K+ + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGSTDLLEAGHQLGKS-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|167854961|ref|ZP_02477736.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853918|gb|EDS25157.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 684

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 127/541 (23%), Positives = 242/541 (44%), Gaps = 46/541 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAD 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I    
Sbjct: 65  KLGITPEQLIEKAKADHIADFAGFNISFDNYHSTHSEENREYTSAIYKKLKANGFIKSKV 124

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE---------- 162
            S  +      +  D            E   G + +   + ++P+  +            
Sbjct: 125 ISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGSTPV 184

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++++ L ++  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 185 VKQSEHFFFDLPSFEEMLKAWTRSGS---LQPEIANKMQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IPD      YVW+DA   Y+ +     D    +   FW  +      H IGKDI+ FH+
Sbjct: 242 EIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLNFDDFWKKESDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G+K+SKS G  I     ++ +  + LRY+   +
Sbjct: 302 LFWPAMLEGSEYRKPTNVFAHGYVTVDGQKMSKSRGTFIQASTYLKHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN+D+ N + NL SR+   I K ++G +    A T  ++++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNSDIVNKLVNLASRTAGFITKRFEGKL----ASTLENQALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                  ++I    + +  ++A+ ++++L  + ++Y D + PW + K          V  
Sbjct: 418 DEFVAQSEQIATYFETREYNKAIREIMALTDKANKYIDDKAPWVIAKEEGKDAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +E+ R L   L+  +PKLA +    L        + ++   L     +   F  +F R
Sbjct: 478 MGLELFRVLMSYLKPVLPKLAERAEAFLQTE---LRWDNIGSPL-FAHSI-APFKSLFSR 532

Query: 510 F 510
            
Sbjct: 533 L 533


>gi|332141410|ref|YP_004427148.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551432|gb|AEA98150.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 675

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 228/543 (41%), Gaps = 46/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E+ ++ +++A+ Y N   H+GH  E I  D+  RF RL G +       D HG  +  
Sbjct: 1   MSEKRRILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRLRGNECYSVCADDAHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +  V +             ++YD++  T    +   C  ++ ++ + G I 
Sbjct: 61  KAQELGITPEEMVARTRAEHHQDLVDFHVNYDNYYVTHSPENKAFCEEIYTRLDNAGYIS 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ----------- 158
           K   +  +    E +  D            E   G       A ++P +           
Sbjct: 121 KRTINQLFDPEKEMFLPDRFVKGTCPSCGAEDQNGDSCDVCGATYSPTEVKNPRSVVSGA 180

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L  ++  L  +  S     L  E  N++  +   GL+   +SR    
Sbjct: 181 TPVLRESEHFFFDLPKFEGMLKEWIRSGA---LQEEMANKLQEWFTEGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y+ +   + D  +     FW AD      H IGKDI  
Sbjct: 238 FGFEIPGAPNKFFYVWVDAPVGYMASFKNFCDQNNLEFDDFWKADSEAELYHFIGKDITY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L  A    P  V  HGF+   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHCLFWPAMLEGAGYRKPTGVNIHGFVTVNGAKMSKSRGTFIKGRTYLDHLNPEYLRYYF 357

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++     D   +     ++VN+DL   + N+ SR  S I K +DG +         + 
Sbjct: 358 ASKLGDGVTDIDLNFTDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSD----NVIEP 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446
            +++      + I    + +  H+A+ ++++L  + +++ D   PW   K    +  T  
Sbjct: 414 ELIAEFQNASESIAALFEKRKYHQAVREIMALADKANQFIDNNAPWVTIKDETKQQFTHD 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + + + R L I L+  +P LA K    L    +   + SL   LK G  ++K F P+
Sbjct: 474 VCSLGINMFRLLVIYLKPVLPVLAEKAEAFLN---DKFDWNSLQTLLK-GHAINK-FKPM 528

Query: 507 FPR 509
             R
Sbjct: 529 MQR 531


>gi|85101208|ref|XP_961106.1| hypothetical protein NCU03759 [Neurospora crassa OR74A]
 gi|30580531|sp|Q9C2H9|SYMM_NEUCR RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|12718314|emb|CAC28665.1| probable METHIONYL-TRNA SYNTHETASE, mitochondrial [Neurospora
           crassa]
 gi|28922645|gb|EAA31870.1| hypothetical protein NCU03759 [Neurospora crassa OR74A]
          Length = 622

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 178/508 (35%), Positives = 277/508 (54%), Gaps = 22/508 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y++T I Y NA PH+GH Y M++ DVL R+  L G   +  TGTDEHG K+ +AA
Sbjct: 58  DNKPFYVTTPIFYVNASPHVGHMYSMVLGDVLKRWQTLKGNQAILCTGTDEHGTKVQRAA 117

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +  K F D NS  F+++A    I YD F+RTT++ H +  +  W  + +KG IY+ 
Sbjct: 118 IANDMDPKQFCDLNSAKFQELAAACRIDYDRFMRTTDQDHVEAVKHFWLLLKEKGLIYEA 177

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY------YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWY + DE +Y + ++ K  D              N V+W+EE+ Y FR++A +D+L
Sbjct: 178 KHEGWYCVSDECFYPESQLEKRQDPFTGEVYVASIESGNKVEWIEEKNYHFRMTALKDQL 237

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L +Y+++P++I+P  R N+V+ +V + L+DLS+SR      WGI++PDD    +YVW+DA
Sbjct: 238 LEFYKNNPDWIVPQTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDDESQTIYVWVDA 297

Query: 235 LTNYLTTTGYLDNPD-GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L NY+T  GY   P        WP D+HVIGKDILRFH IYWPA LL+ +LPLPK++ SH
Sbjct: 298 LINYITMAGYPYWPPGREHLGGWPVDVHVIGKDILRFHCIYWPALLLALDLPLPKRILSH 357

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                + +K+SKS+GNV++P   +E  G+D +R++++       D  Y  D L       
Sbjct: 358 AHWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMIHNGGIANDADYSNDWLTVEYKKH 417

Query: 354 LANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDE---SILSVCSRVLQEIR 402
           L NG+GNL +R            +    DG +       + ++     ++   ++   I 
Sbjct: 418 LQNGVGNLSARVTRPKQWSLRRAVQSYQDGNMLLQSTGEQINDSCVEHITRLDKLASTID 477

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAI 460
             M       AL +++ L+ E + +    +PW + K     A    ++    E +R   I
Sbjct: 478 NEMLQLNPSHALQKIMGLIGETNAFISNAEPWVIVKKQDSEALVDRIILTAGESLRIAGI 537

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQS 488
           LLQ F+P  A ++ D+L V + NR F  
Sbjct: 538 LLQPFMPDKAAQLLDLLGVENHNRTFHH 565


>gi|189460088|ref|ZP_03008873.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136]
 gi|189433249|gb|EDV02234.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136]
          Length = 680

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 141/546 (25%), Positives = 248/546 (45%), Gaps = 41/546 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     RD      IS+D + RT+ K HHDT    ++K+ DK +
Sbjct: 61  TIRAKKEGVTPQDIVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKNE 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +   +  +P +         
Sbjct: 121 FIEKTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKCGSTLSPTELINPKSAIS 180

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR  
Sbjct: 181 GSQPVMKETKHWYLPLDKHESWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + 
Sbjct: 239 LDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELLPDSWEKWWKDPETRLIHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V ++ F+  +G+KIS S    +   E +++     D LR
Sbjct: 299 FHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G   + 
Sbjct: 359 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTNKYFDGKVPACGELNDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 419 DRDTLKEFADVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMNRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFD 504
           +L ++++++  LAI  + F+P  + K+  +L +  E+  ++ L     L  G  L+K  +
Sbjct: 479 ILNISLQLVANLAIAFEPFLPFSSEKLRHMLNM--ESFEWEQLGRTDLLSEGHQLNKP-E 535

Query: 505 PIFPRF 510
            +F + 
Sbjct: 536 LLFEKI 541


>gi|171692863|ref|XP_001911356.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946380|emb|CAP73181.1| unnamed protein product [Podospora anserina S mat+]
          Length = 637

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 188/524 (35%), Positives = 288/524 (54%), Gaps = 22/524 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQ 63
           +  Y++T I Y NA PHIGH Y M +ADVL R+  +      +  TGTDEHG KI +AA 
Sbjct: 67  KPYYVTTPIFYVNAAPHIGHMYSMTLADVLKRYQSVLHSRPAILLTGTDEHGMKIQQAAS 126

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           N  +  K F D+ +  F+++A    ISY+ FIRTT+  H       W  + +KG IY+  
Sbjct: 127 NKDMHPKQFCDETAEQFKELASTAQISYNRFIRTTDTDHIQAVEHFWFLLQEKGLIYESK 186

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           + GWYS+ DEA+Y + ++ K  D              + V+W+EE  Y FR++A +++LL
Sbjct: 187 HEGWYSVSDEAFYPESQIEKKMDAFTGEVFMASVESGSKVEWVEERNYHFRMTALRERLL 246

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
            +Y  +PE+++P +R  +V+ +V++ L DLS+SR      WG+++P D    +YVW+DAL
Sbjct: 247 GFYGENPEWVVPAKRMGDVVDWVRNHLTDLSISRPASRLSWGVRVPGDASQTIYVWVDAL 306

Query: 236 TNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
            NY+T  G+ +   G +    WPAD+HVIGKDI+RFH +YWPA LL+ +LP+PKKV +H 
Sbjct: 307 INYITAAGFPNWQPGRREVGGWPADVHVIGKDIVRFHCVYWPALLLALDLPMPKKVLTHA 366

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                  K+SKSLGNV++P+ V+   G D LR++L+ E   G D  Y+ D L  +    L
Sbjct: 367 HWTMNRTKMSKSLGNVVNPMYVMNVHGADVLRFYLMFEGGIGNDADYNNDNLLVKHKKYL 426

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G+GNLVSR     L D   +I                 + +   + ++M+N     AL
Sbjct: 427 QGGVGNLVSRITRSKLWDLKEIISRSPRGRIEFPE--DNLATLPAIVDKHMENLDPVSAL 484

Query: 415 AQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             ++ + ++ +      +PW LKK     + D A  ++ +  E +R   ILLQ F+P  A
Sbjct: 485 RAIMEVATQANALLSEIEPWRLKKSTNQEDHDLADEMVCLAAESLRVCGILLQPFLPTKA 544

Query: 471 NKIFDILFVADENRCFQS--LDQRLKPGFMLHKTF----DPIFP 508
           +++ D+L V  ENR F++  L      G  +        D +FP
Sbjct: 545 DQLLDMLGVLPENRTFKNTELFSDTSYGVPIANPGKGREDSLFP 588


>gi|90579105|ref|ZP_01234915.1| methionyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439938|gb|EAS65119.1| methionyl-tRNA synthetase [Vibrio angustum S14]
          Length = 681

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 131/541 (24%), Positives = 229/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +      DI + ++  T    + +    ++ ++ DKG I     
Sbjct: 66  MGMEPEQMIAEVSKEHQADFAGFDIDFSNYHSTHSPENRELASFVYTQLKDKGFITSRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P                 
Sbjct: 126 SQLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTKSGA---LQEETSNKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLKHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVN+D+ N I NL SR+   I K +DG +       E    + 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPE----LY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +        I E  +++   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFVEAADRIGELYESREFGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQEICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L+  +PKLA +    L    +   ++++ + L         F  +F R
Sbjct: 479 VGINLFRVLMAYLKPVMPKLAERSEAFLN---DTLTWENIAKPLT--THEVTKFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|161936261|ref|YP_101774.2| methionyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|253566405|ref|ZP_04843858.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265767265|ref|ZP_06094931.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|68565973|sp|Q64MP7|SYM_BACFR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|251944577|gb|EES85052.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263252570|gb|EEZ24082.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301165294|emb|CBW24865.1| putative methionyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 679

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 240/542 (44%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+ K HH+     +KK+ +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y      +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMKETKHWYLPLDKHETWLRQWILEEHKEWRPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V S+ F+  +G+KIS S    +   E +E+     D LRY 
Sbjct: 301 CIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G  T+ D+
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGELTDYDK 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T+L
Sbjct: 421 ETLKEFSDVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGTIL 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            ++++++  LAI  + F+P  + ++  +L +   +      +  L  G  L+K  + +F 
Sbjct: 481 NISLQLVANLAIAFEPFLPFSSERLRQMLNMDSFDWAELGRNDLLPAGHQLNKP-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|91227376|ref|ZP_01261765.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188640|gb|EAS74930.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 679

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/539 (24%), Positives = 228/539 (42%), Gaps = 47/539 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ  G
Sbjct: 1   MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  +   S   +      DIS+D++  T    + +    ++ ++   G I     S 
Sbjct: 61  ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTISQ 120

Query: 127 WYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------WME 161
            +    E +  D            E   G +       ++P +                +
Sbjct: 121 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +IP
Sbjct: 181 SEHFFFDLPQFESMLKEWTRSGS---LQAETANKMQEWFESGLQQWDISRDAPYFGFEIP 237

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIY 274
            +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ FH+++
Sbjct: 238 GEKNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSLF 297

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-I 333
           WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   +  
Sbjct: 298 WPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKLN 357

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     ++ 
Sbjct: 358 SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAA 417

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVT 451
             R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  V 
Sbjct: 418 ADR----IAELYETREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQDICSVG 473

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + R L   L+  +P LA +    L    +   ++++   L  G  + K F  +F R 
Sbjct: 474 INLFRVLMTYLKPVMPSLAARTEAFLN---QELTWENIADPLT-GHEITK-FKALFNRI 527


>gi|302418792|ref|XP_003007227.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354829|gb|EEY17257.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 620

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 185/549 (33%), Positives = 282/549 (51%), Gaps = 45/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y+++ I Y NA PH+GH Y MI+AD L R+  L G D L+ TGTDEHG K+ +AA  
Sbjct: 66  KPFYVTSPIFYVNASPHVGHMYTMILADSLKRWQTLRGRDALYCTGTDEHGMKVQRAAAK 125

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  K F D N+  FR +A    I  D F+RTT+  H D  +  W  +   G +Y+  +
Sbjct: 126 QGIPPKAFCDNNADKFRQLAAACGIDNDFFVRTTDADHMDAVQHFWHLLRAGGHVYESTH 185

Query: 125 SGWYSLRDEAYYNDDEV------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWY + DE +Y +DEV        G       A  + V+W EE+ Y FR+ A +D+LL 
Sbjct: 186 SGWYCVSDECFYAEDEVERAIVPQTGRTIMASIATGSEVEWTEEKNYHFRMKAMRDRLLQ 245

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
           +Y+ +P++I+P  R NEV+S+V+  L+DLS+SR    FDWGI++PDDP   +YVW+DAL 
Sbjct: 246 FYDDNPDWIVPRARMNEVVSWVRHNLEDLSISRPVSRFDWGIRVPDDPSQTIYVWVDALI 305

Query: 237 NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NYLT  G+     G +    WPAD+HVIGKDI+RFH +YWPA LL+  LP PK++ SH  
Sbjct: 306 NYLTKAGFPAWAPGDEHSGGWPADVHVIGKDIVRFHGVYWPALLLAVGLPPPKQLLSHAH 365

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                +K+SKS+GNV++P + IE   +D +RYF++R+     D  Y+   +  R   DL 
Sbjct: 366 WTLGKKKMSKSVGNVVNPFQAIERWDLDTMRYFMLRDGGLENDADYENRFIFARYEKDLQ 425

Query: 356 NGIGNLVSRSVSMILKDYD--------------------------GMIPTPGAFTESDES 389
             +GN +SR       +                             +  +  A       
Sbjct: 426 WTLGNALSRITRSTKWNVADAVRWARDHHHQAAAAAAAHGAEVEAEVEASADAPQSRQRR 485

Query: 390 ILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-TV 447
           + ++     + +   M+ +     A+   ++L+ E +++     PW+  K   D A   +
Sbjct: 486 LAALVDETPRVMAAAMETDLNPSAAIKAAMTLLVEANKFIADSAPWDKTKVPSDAARNAI 545

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL--------DQRLKPGFML 499
           ++   E +R   +LLQ F+P    ++ DIL V    R F             R +   + 
Sbjct: 546 VFHAAEALRVAGVLLQPFMPGKMGEMLDILGVQPARRTFAHATFGGDVEYGARKEAAALP 605

Query: 500 HKTFDPIFP 508
              +  +FP
Sbjct: 606 RGKWTGLFP 614


>gi|290473994|ref|YP_003466868.1| methionine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289173301|emb|CBJ80076.1| methionine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 675

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 132/540 (24%), Positives = 231/540 (42%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+HR+ G +V F    D HG  I   AQ +
Sbjct: 7   KLLVTCALPYANGPIHLGHILEHIQADIWVRYHRMRGKEVHFICADDAHGTPIMLKAQQS 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  + + S   +       ISYD++  T  + + +    ++ K+   G I     S
Sbjct: 67  GISPEEMIAKVSLEHQQDFAGFAISYDNYHSTHSEENKELASQIYLKLKKNGYIKSRKIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QWM 160
             Y      +  D            E   G + +     ++P               +  
Sbjct: 127 QLYDPEKGMFLPDRFVKGACPKCKAEDQYGDNCEVCGTTYSPTELINPRSAVSGATPEMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  + D L  +  S     L  +  N++  +  +GL+   ++R    +G +I
Sbjct: 187 DTEHFFFDLPVFSDMLQKWTRSGS---LQEQVANKMQEWFDAGLQQWDITRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD+P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH++
Sbjct: 244 PDEPGKFFYVWLDAPIGYMGSFQNLCSKRDDLNFDEFWSKDSEADLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +N   P  +F HG+I   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSNYRKPTNLFVHGYITVNGTKMSKSRGTFIKAETYLKHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K + G +        +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFAGKLADQ----LADPALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 + I E+  ++   +A+ ++++L    +RY D Q PW + K          +  +
Sbjct: 420 QFVDAAEGIAEDFTHREFSKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L ++    L        +  + Q L         F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPSLTDRTEAFLNTE---LTWDGIRQPLL--NHEVSPFKALFNRI 534


>gi|119500964|ref|XP_001267239.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119415404|gb|EAW25342.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 572

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 185/509 (36%), Positives = 265/509 (52%), Gaps = 22/509 (4%)

Query: 20  PHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78
           PH+GH Y M+I D+L R+  L G  D    TGTDEHG KI +AA  AG+  + F D N +
Sbjct: 66  PHVGHFYTMVITDILKRWRVLLGDKDAQLLTGTDEHGMKIQQAASAAGMDPQAFCDMNCK 125

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
            F+ +A   ++ YD FIRTT+  H +  +  W+ ++ +G IY   + GWYS+ DE +Y  
Sbjct: 126 TFQALAKAANVDYDHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEGWYSVSDETFYPP 185

Query: 139 DEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
            +V        G            V+W  E  Y FRLSA+Q++LL  Y+S  EF+ P   
Sbjct: 186 TQVQNSLDPSTGRKRMVSVETGKEVEWSSETNYHFRLSAFQERLLELYKS-TEFVTPGNY 244

Query: 193 RNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
             +++  V SGL DLS+SR      WGI +P D    +YVW+DAL NYLT  GY   P  
Sbjct: 245 MADLVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDALINYLTKAGYPFPPGQ 304

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
                WPAD+HVIGKDI+RFH +YWPAFL++ +LPLP++V  HG      EK+SKS GNV
Sbjct: 305 EGRLGWPADVHVIGKDIVRFHCVYWPAFLMALDLPLPRRVLIHGHWTINREKMSKSTGNV 364

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P   I+  GVD +R+FL  +     D  YD   + +     L  GIGNL  R++    
Sbjct: 365 VNPFFAIDRFGVDTMRFFLAFQGGLAGDADYDNSYIIRDYKKLLQWGIGNLTHRTIGCAK 424

Query: 371 KDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            +      D       A T  D    S+  +  + + E M+      AL  ++ ++ + +
Sbjct: 425 GNLRSYIADAAADKLPAPTPEDLEHQSLLEQTPERVAEQMEKLNPRAALQGIMVIIEKTN 484

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-- 483
           +YF A +PW+     P  +  VLY   E +R   ILLQ F+P  +N++ DIL V      
Sbjct: 485 KYFHAAEPWKT----PAESQRVLYNVAESLRISGILLQPFMPSKSNELLDILRVDKTEPS 540

Query: 484 -RCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
            R F +      P +        +FP  +
Sbjct: 541 KRSFSAARYGCDPDYGEGVKKSILFPPLI 569


>gi|219870418|ref|YP_002474793.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782867|sp|B8F3E3|SYM_HAEPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219690622|gb|ACL31845.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 684

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 128/541 (23%), Positives = 242/541 (44%), Gaps = 46/541 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   A 
Sbjct: 5   KRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAD 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  +++   +        +IS+D++  T  + + +    ++KK+   G I    
Sbjct: 65  KLGITPEQLIEKAKADHIADFAGFNISFDNYHSTHSEENREYTSAIYKKLKANGFIKSKV 124

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE---------- 162
            S  +      +  D            E   G + +   + ++P+  +            
Sbjct: 125 ISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSVVSGSTPV 184

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L ++++ L ++  S     L  E  N+V  + +SGL+   +SR    +G 
Sbjct: 185 VKQSEHFFFDLPSFEEMLKAWTRSGS---LQPEIANKVQEWFESGLQQWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IPD      YVW+DA   Y+ +     D    +   FW  +      H IGKDI+ FH+
Sbjct: 242 EIPDSENKFFYVWLDAPIGYMASFKNLCDRTGLNFDDFWKKESDAELYHFIGKDIVYFHS 301

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF+HG++   G+K+SKS G  I     ++ +  + LRY+   +
Sbjct: 302 LFWPAMLEGSEYRKPTNVFAHGYVTVDGQKMSKSRGTFIQASTYLKHIDPECLRYYYAAK 361

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  ++ +   +RVN+D+ N + NL SR+   I K ++G +    A T  ++++ 
Sbjct: 362 LNDRIEDLDFNLEDFVQRVNSDIVNKLVNLASRTAGFITKRFEGKL----ASTLENQALF 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                  ++I    + +  ++A+ ++++L  + ++Y D + PW + K          V  
Sbjct: 418 DEFVAQSEQIATYFETREYNKAIREIMALTDKANKYIDDKAPWVIAKEEGTDAELQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +E+ R L   L+  +PKLA +    L        + ++   L     +   F  +F R
Sbjct: 478 MGLELFRVLMSYLKPVLPKLAERAEAFLQTE---LRWDNIGSPL-FAHSI-APFKSLFSR 532

Query: 510 F 510
            
Sbjct: 533 L 533


>gi|315223783|ref|ZP_07865632.1| methionine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946229|gb|EFS98229.1| methionine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 688

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 130/536 (24%), Positives = 238/536 (44%), Gaps = 43/536 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV F  G+DEHG  I+  A+
Sbjct: 3   KRYTITAALPYTNGPIHIGHLAGVYVPADIFARYQRLKNNDVAFICGSDEHGVAISIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  +D+     +       IS+D++ RT+   HH T    +KK+ ++GD  +  
Sbjct: 63  KEGTTPQAIIDKYHAIIKQSFADFGISFDNYSRTSAPIHHQTASDFFKKLYEQGDFIEEI 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
               Y      +  D  V             G   +   +  N    ++ +         
Sbjct: 123 SEQLYDEEAHQFLADRFVIGTCPKCGNPEAYGDQCERCGSSLNATDLIDPKSSITGSKPT 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F  L+ YQ+ L  +     +         +V S++   LK  +++R   DWGI
Sbjct: 183 LKATKHWFLPLNRYQEFLEQWILEGHKSDWKPNVYGQVKSWLDDELKPRAVTRD-LDWGI 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P +     ++YVW DA   Y+++T      +G   + +  D     +H IGKD + FH
Sbjct: 242 PVPIEGAEGKVLYVWFDAPIGYISSTKEWAEREGKDWRPYWQDSDTQLVHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V ++ F+  +  K+S S    +   E +++     D LRY 
Sbjct: 302 CIIFPAMLKAEGSFILPANVPANEFLNLESNKLSTSKNWAVWLHEYLQDFPNQQDVLRYV 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R   +  K Y+G++P    +   D 
Sbjct: 362 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTQKYYEGVVPQADTYNNVDT 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + +  +I ++++      A  +++++    ++Y   ++PW+L KT+P+R  TV+
Sbjct: 422 ETLRQITELTDKIEQSLERYRFREAQQELMNMARLGNKYLADEEPWKLIKTDPERVKTVM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD----QRLKPGFMLH 500
           Y+ +++   LA+  + F+P  + K+  +L +      ++SL     + LK G  + 
Sbjct: 482 YIALQIATALAVASEPFLPFTSEKLKRMLQLG--AITWESLKTNATELLKAGHRIG 535


>gi|152979488|ref|YP_001345117.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|187645703|sp|A6VQD5|SYM_ACTSZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150841211|gb|ABR75182.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 685

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 130/544 (23%), Positives = 238/544 (43%), Gaps = 50/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   
Sbjct: 3   KANRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGHEIYFVCADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+  +  +    ++        +IS+D++  T  + + +   +++ ++ + G I  
Sbjct: 63  ADQMGIAPEQLIADVQKSHYADFCGFNISFDNYHSTHSEENREFSEMIYNRLKENGFIKT 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
              S  +      +  D            E   G + +  +A ++P + +          
Sbjct: 123 RAISQLFDPEKSMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELIAPRSVVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L +++  L    + +    L  E  N++  +  +GL+   +SR    +
Sbjct: 183 PIIKESEHFFFDLPSFEAMLK---QWNRSGALQSEVANKMQEWFDAGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G KIP       YVW+DA   Y+ +     +  +    +FW  D      H IGKDI+ F
Sbjct: 240 GFKIPGTENKYFYVWLDAPIGYMASFKNLCNRQNIDFDRFWNKDSQAELYHFIGKDIMYF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ +  + LRY+  
Sbjct: 300 HSLFWPAMLEGADLRKPSNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYYYA 359

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN DL N + NL SR+   I K + G +         DE+
Sbjct: 360 AKLSNRIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGFIQKRFAGKLADK----LDDEA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +       +I    +N+   +A+ ++++L  + ++Y D + PW + K          V
Sbjct: 416 LFNEFIAQSAQIAAYYENREFGKAVREIMALTDKANKYVDEKAPWVIAKEQGRETELQRV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFDP 505
             + +++ R L   L+  +PKLA +    L   +  +N     LD  + P       F  
Sbjct: 476 CSMGIQLFRVLMGYLKPVLPKLAERSEAFLQAELTWDNLTQPLLDHEIAP-------FKA 528

Query: 506 IFPR 509
           +F R
Sbjct: 529 LFSR 532


>gi|254492552|ref|ZP_05105724.1| methionyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462444|gb|EEF78721.1| methionyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 678

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 131/540 (24%), Positives = 235/540 (43%), Gaps = 45/540 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF R+ G +  +    D HG  I   AQ
Sbjct: 2   QRKILVTSALPYANGSIHLGHMVEYIQTDIWVRFQRMRGHECHYVCADDAHGTPIMLRAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  +   S   +       IS+D++  T    +      ++    D G I    
Sbjct: 62  KEGITPEQLISDVSTEHQADFAEFAISFDNYHSTHSDENRALASQIYLANRDAGHIETRT 121

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW------------- 159
            S  Y    E +  D  +             G + +   A ++P +              
Sbjct: 122 ISQAYDPEKEMFLPDRFIRGECPKCGAADQYGDNCEACGATYDPTELKNPVSAVSGATPI 181

Query: 160 -MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+L  ++  L  +  S     L  E   ++  + +SGL+D  +SR    +G 
Sbjct: 182 TKESEHYFFKLGDFEKTLQEWTHSD---HLQPEVTRKLSEWFESGLQDWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRFHA 272
           +IPD      YVW+DA   YL +     +  G     +         +H IGKDI+ FHA
Sbjct: 239 QIPDTDNKFFYVWMDAPIGYLASFKNYCDRSGIDFDSFMKPGSDTEMVHFIGKDIIYFHA 298

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+   +
Sbjct: 299 LFWPAMLEGAGFRQPDNVYAHGFLTVDGKKMSKSRGTFIKARTYLDHLNPEYLRYYFAAK 358

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D     +  + R+N+DL   + N+ SR    + K +DG + +      S+ S+ 
Sbjct: 359 LGSGIDDIDLSLEDFQTRINSDLVGKVVNIASRCAGFLTKRFDGKLGS----ELSEPSLF 414

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +   +  + I +  +++   +A+ ++++L    ++Y D  KPW L K +   A    +  
Sbjct: 415 NDFIKQAENIAKRYEDREFGQAMREIMALADRANQYIDEMKPWVLAKEDGKEAEVQAICT 474

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +PK A +    L +  E   +++++  L     ++K F P+  R
Sbjct: 475 MGINLFRVLIAYLKPVLPKTAEQAEAFLNI--EALQWENIEAPLL-DHNINK-FKPLMTR 530


>gi|28572916|ref|NP_789696.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28411049|emb|CAD67434.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 583

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 295/582 (50%), Gaps = 82/582 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T + Y N  PHIGHAY ++++DV AR+ R  G D  F +GTDEHG K+ +AA+   
Sbjct: 3   FYITTPVFYVNDIPHIGHAYTLVVSDVFARWQRQSGKDTFFLSGTDEHGLKVLRAAEEKN 62

Query: 67  VTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T + + D   +  ++ + D++ IS DDF+RTTE RH +  +    ++ +   IY G YS
Sbjct: 63  MTPQGWADLMVKTAWKPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYS 122

Query: 126 GWYSLRDEAY-------YNDDEVYKGADG---------------QYYNAQHNPVQWMEEE 163
           G+Y +  E +         +DE   G  G                +       ++   E+
Sbjct: 123 GYYCVSCEEFKTVSQSALPNDESVNGTLGKDPRTCSLPQGEEQNYFCEVHGCQLEHFTEK 182

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFFRLSA+ D+LL  Y+ +P+FI P    NEV+ FVK+G+ DLS+SR +F WGI++P D
Sbjct: 183 NYFFRLSAFTDRLLDLYKKNPDFIEPKSAYNEVVQFVKNGVSDLSISRSSFTWGIEVPWD 242

Query: 224 PQYIMYVWIDA------------------LTNYLTTTGYLDNPDGS-------------- 251
             +++YVW DA                   T          +   +              
Sbjct: 243 EGHVVYVWFDALINYLTPVMSAKEELPIDGTTPGGAEFCTHSNLNTLESSIPGPGGSAES 302

Query: 252 -------------------KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
                                K+WPA  H+IGKDILRFHA+ WPA L++A LP+P+K+F+
Sbjct: 303 DRLSHTLSTSADNAALTSPFKKYWPAS-HIIGKDILRFHAVIWPAMLMAAGLPVPEKIFA 361

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L  G+K+SKS    I P ++ +  GVDA+RY+ +R+   G+D  +  + +    N+
Sbjct: 362 HGWLLVDGQKMSKSKLTGIKPQDLTDIFGVDAVRYYFLRQPVFGQDYSFSIESIAACYNS 421

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LA+G GNL  R  SM     +G +  P  ++E DES+L  C  V     + +   + H 
Sbjct: 422 ELADGYGNLACRLSSMYTTYLNGRVIVPKIYSEEDESLLQACKDVSDRACKAIDELIPHI 481

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+A++ SL    + Y   Q+PW L KK + +R + VLY  +  +  + ILL   +P++ N
Sbjct: 482 AMAEIWSLAVRANTYTTRQQPWSLHKKQDDERLACVLYTALRALSTITILLSPIMPRITN 541

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFML---HKTFDPIFPRF 510
           K++     AD     Q++  R   G  L        P+FP+ 
Sbjct: 542 KLWSAFG-ADGGVSQQNI--RSAWGGKLSDKVSLIPPMFPKI 580


>gi|88859987|ref|ZP_01134626.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817981|gb|EAR27797.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 673

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 139/542 (25%), Positives = 241/542 (44%), Gaps = 50/542 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ ARF +L G    +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWARFQKLRGHQAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  V + S   +      +I +D++  T    +     +++ +++DKG I K  
Sbjct: 63  KQGITPEEMVARVSVERQRDFADFNILFDNYHSTHSPENKVLSELIYNRLNDKGHIKKRT 122

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE---------- 162
            S  +      +  D  V             G       A ++P +  +           
Sbjct: 123 ISQLFDPEKGIFLPDRFVTGTCPSCDAVDQNGDSCDVCGATYSPTELKDPRSVMSGATPV 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +FF L A++  L ++  S     +  E  N++  +   GL+   +SR    +G 
Sbjct: 183 LKDSEHFFFDLPAFEGMLKTWLRSGS---IQSEMANKLEEWFADGLQQWDISRDAPYFGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IP+ P    YVW+DA   Y+ +     D    +  +FW  D      H IGKDI+ FH+
Sbjct: 240 EIPNAPGKYFYVWLDAPIGYMASFKNLCDKTGLNFDEFWSKDSDAELYHFIGKDIIYFHS 299

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A+   P  VF+HGF+   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 300 LFWPAMLEGADFRKPTNVFAHGFVTVNGAKMSKSKGTFIKARTYLDHLNPEYLRYYFAAK 359

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDES 389
           +     D   + +   +RVNADL   + N+ SR  S I K +D      G  +E   D +
Sbjct: 360 LNSGITDLDLNLEDFAQRVNADLVGKVVNIASRCASFITKKFD------GTLSEVILDPA 413

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           ++S      + I  + + +   RA+ ++++L  + +++ DAQ PW L K     + A  V
Sbjct: 414 LISEFQNASESIANHFEGRDYSRAIREIMALADKANQFIDAQAPWVLIKDESKQELAHQV 473

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L + L+  +PK+A+ +   L     +  ++S    L  G  ++  F  + 
Sbjct: 474 CTQGLNMFRLLMVYLKPVLPKMASDVEAFLNT---DLAWESAQTVLT-GHTIN-PFKALM 528

Query: 508 PR 509
            R
Sbjct: 529 QR 530


>gi|268317124|ref|YP_003290843.1| methionyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334658|gb|ACY48455.1| methionyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 699

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/558 (23%), Positives = 245/558 (43%), Gaps = 55/558 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++ ++ A+ Y N   HIGH A   + AD+  R+ RL G DVLF  G+DE G  I   A 
Sbjct: 7   DRILVTAALPYANGPIHIGHLAGAYLPADLYCRYQRLKGRDVLFICGSDELGVAILMRAL 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  VD+     RD      +S+D + RTT   H +T +  ++++ +KG      
Sbjct: 67  EEGTTPQAIVDRYHPMIRDSFARFGMSFDYYGRTTSPVHFETSQDFFRRLDEKGVFKLKT 126

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------Q 158
               Y      +  D  V             G   +   +  +P               +
Sbjct: 127 EKQLYDPEAGIFLADRFVRGTCPICGYEDAYGDQCERCGSSLSPTDLINPRSVLSNATPE 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E   ++  L  +Q KL ++  +HPE+        +V S+++ GL+D +++R    WG+
Sbjct: 187 LRETTHWYLPLGDFQPKLEAWIATHPEWK--PNVLGQVRSWLQQGLRDRAVTRD-IPWGV 243

Query: 219 KIPDD---------PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHV 262
            +P+D            ++YVW DA   Y++ T        D    + +  D     +H 
Sbjct: 244 PVPEDVARRHGVPAEGKVLYVWFDAPIGYISATREWAQQKGDPEAWRRYWQDERTRLIHF 303

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +PA L+      LP  V ++ F+  +G K+S S G  +   E +EE  
Sbjct: 304 IGKDNIVFHCLMFPAMLMAHGEFVLPDNVPANEFLNLEGRKLSTSRGWAVWLHEYLEEFP 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY L   +   +D  +     ++RVNA+LA+ +GN V R+++   +  +  +P   
Sbjct: 364 PDLLRYALATMLPETRDADFSWKEFQQRVNAELADILGNFVHRTLTFAQRFAERRVPPLR 423

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                DE +L   +   + I    +      A+ + ++L    ++YF+  +PW  +KT+P
Sbjct: 424 NPRSVDEEVLRELATFPERIGSAYEQFRFREAVQETMNLARLGNKYFNDTEPWHTRKTDP 483

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV---------ADENRCFQSLDQR 492
              +  ++V++++   L IL++  +P  A ++ ++L +          +    +    + 
Sbjct: 484 QACANTIHVSLQICAALGILMEPVLPFAAARLREMLRLEGVRSSTPGGEGQLGWDDAARP 543

Query: 493 LKPGFMLHKTFDPIFPRF 510
           L P        + +F + 
Sbjct: 544 LLPEGHEIGRPEILFTKI 561


>gi|212223727|ref|YP_002306963.1| methionyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558528|sp|B6YUN0|SYM_THEON RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|212008684|gb|ACJ16066.1| methionyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 733

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 137/551 (24%), Positives = 255/551 (46%), Gaps = 56/551 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G +V+F +GTDEHG  I   A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVIFISGTDEHGTPITFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD    + +   +   IS+D F RT    H+   +  + K  +   + K   
Sbjct: 63  EGKSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQDFFLKALENDHLIKKVS 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                  N   NP+ +
Sbjct: 123 KQAYCEHDKMFLPDRYVIGTCPYCGAENQRGDQCEVCGHPLTPEELINPRCNICGNPITF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ ++  + +KL  + +S   +      +N V+ +++ GL++ +++R   +WGI 
Sbjct: 183 RDSAHYYIKMQDFAEKLKEWVQSQEHWK--PNVKNTVLGWIEEGLEERAITRD-LNWGIP 239

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW------PADLHVIGKD 266
           +P D +     ++YVW +A   Y++ T      +       KFW         +H IGKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITVEHLKREGKENEWKKFWLNLDGGTKVIHFIGKD 299

Query: 267 ILRFHAIYWPAFLLSANLP----------LPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            + FHAI+WPAFL++              LP  + ++ ++  +G+K S S    I   E 
Sbjct: 300 NIPFHAIFWPAFLMAYGKYKEEETEAEWLLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++    D LRY+L   +   +D  +     K ++N +L N +GN V R+++ + + +DG+
Sbjct: 360 LDAFPADYLRYYLTAIMPETRDSDFSFADFKTKINEELVNNLGNFVHRALTFVNRYFDGV 419

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G   + D        + L+E  E +       AL +V+ L    +RYFD QKPW+ 
Sbjct: 420 VPERGELDDLDRQAFEEIEKALKETGELISTYRFKDALRRVMELAIFGNRYFDYQKPWKT 479

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            K N +R +T + V++++++ L +LL+ F+P  + KI+ +L + +  R ++ ++  +  G
Sbjct: 480 AKENRERTATTVNVSLQIVKVLGVLLEPFLPDASEKIWHLLNLEETKR-WEFIE--IPAG 536

Query: 497 FMLHKTFDPIF 507
             + +  + +F
Sbjct: 537 HRV-RRAEILF 546


>gi|253990367|ref|YP_003041723.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781817|emb|CAQ84980.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 675

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/540 (24%), Positives = 231/540 (42%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  +   AQ  
Sbjct: 7   KLLVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGKEVHFICADDAHGTPVMLKAQQM 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +  +   ++          +SYD++  T  K + +    ++  +   G I     S
Sbjct: 67  GIAPEEMIAAVNQEHHQDFIGFSVSYDNYHSTHSKENQELSTKIYLALKKNGHIKSRTIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QWM 160
             Y      +  D            E   G + +   + ++P               +  
Sbjct: 127 QLYDPEKGMFLPDRFVKGSCPKCKAEDQYGDNCEVCGSTYSPTELLNPRSAVSGATPEMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E +FF L A+ + L ++  S     L  +  N++  + +SGL+   ++R    +G +I
Sbjct: 187 ETEHFFFDLPAFSNMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFEI 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+ +   L +  G+     FW  D      H IGKDI+ FH++
Sbjct: 244 PDAPGKYFYVWLDAPIGYMGSFQNLCDKRGNLSFDDFWAKDSTADLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF HG++   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSGYRKPTNVFVHGYVTVNGAKMSKSRGTFIKASTYLDHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K + G +        +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFSGKLADK----LADPALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                 + I E   N+   +A+ ++++L    +RY D Q PW + K          +  +
Sbjct: 420 KFIDGAKVIEEEFNNREFSKAIREIMTLADLANRYVDEQAPWVVAKEEGRDADLQAICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P LA +    L        + +++Q L     +   F  +F R 
Sbjct: 480 GINLFRVLMTFLKPVLPNLAERAEAFLNTE---LTWGNIEQPLL-KHQICA-FKALFNRI 534


>gi|83769155|dbj|BAE59292.1| unnamed protein product [Aspergillus oryzae]
          Length = 590

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 187/543 (34%), Positives = 274/543 (50%), Gaps = 39/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQK--- 57
           + ++  Y++T I Y NA PH+GH Y MIIAD+L R+  L G  D    TGTDEHG K   
Sbjct: 51  EHKKPYYVTTPIFYVNAAPHVGHLYTMIIADILKRWRTLCGETDAQLLTGTDEHGMKGYS 110

Query: 58  -------------IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                        I +AA  A + T+ F D N + F D+A   ++ Y+ FIRTTE  H  
Sbjct: 111 QSKNFHGIDCTVQIQQAALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKK 170

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQ 158
           + +  W+ +  +G IY   + GWYS+ DE +Y   +V+       G            V+
Sbjct: 171 SVQYFWEMLDHRGYIYTSKHEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVE 230

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDW 216
           W  E  Y FRLSA+Q++LL  Y++   FI P     E++  V SGL+DLS+SR      W
Sbjct: 231 WSSETNYHFRLSAFQERLLDLYKTG--FITPSNYTTEIVKSVSSGLQDLSISRPVERLTW 288

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           GI +P D    +YVW+DAL NYLT  GY   P       WPAD+HV+GKDI+RFH +YWP
Sbjct: 289 GIPVPGDDTQTIYVWLDALVNYLTKAGYPFPPGQEGGLGWPADVHVVGKDIVRFHCVYWP 348

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           AFL++ +LPLP+ V  HG      EK+SKS GNV++P   ++  GVD +R+FL  +    
Sbjct: 349 AFLMALDLPLPRNVLVHGHWTINHEKMSKSTGNVVNPFFSLDRFGVDTMRFFLAYQGGLA 408

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESIL 391
            D  YD   + +     L +GIGNLV R++          I +       A  E D    
Sbjct: 409 GDADYDNSYIIRDYKKLLQSGIGNLVLRTIGSSKGKLHSYIVSGTSGELPAANEQDLQFE 468

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +      ++ E M++     AL  ++ L+ + ++Y    +PW+    +  +A  VL+  
Sbjct: 469 QLLRETPVKVGEQMESLNPRAALQNIMVLIEQGNKYIHLSEPWK----DAIKAQRVLFNV 524

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE---NRCFQSLDQRLKPGFMLHKTFDPIFP 508
            E +R   ILLQ F+P  + ++ D+L V       R F +        +        +FP
Sbjct: 525 AESLRIAGILLQPFMPTKSKELLDVLRVDGTRPSKRAFSAAVFGSDAEYGEGIKKTVLFP 584

Query: 509 RFL 511
             +
Sbjct: 585 PLI 587


>gi|37679443|ref|NP_934052.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|61216264|sp|Q7MM14|SYM_VIBVY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|37198187|dbj|BAC94023.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 690

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 227/542 (41%), Gaps = 47/542 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ
Sbjct: 10  QRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQ 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I    
Sbjct: 70  QMGMSPEEMIAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 129

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ-------------- 158
            S  +    E +  D            E   G +       ++P +              
Sbjct: 130 ISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 189

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 190 MKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGF 246

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ FH
Sbjct: 247 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   
Sbjct: 307 SLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAA 366

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +       E     
Sbjct: 367 KLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEF 426

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 427 VAAADR----IAELYEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQEIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V + + R L   L+  +P LA +    L    E   ++ + Q L     +   F  +F 
Sbjct: 483 SVGINLFRVLMTYLKPVMPALAARTEAFLN---EELTWEGVAQPLTA-HEITA-FKALFN 537

Query: 509 RF 510
           R 
Sbjct: 538 RI 539


>gi|310768068|gb|ADP13018.1| methionyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 676

 Score =  344 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 124/521 (23%), Positives = 227/521 (43%), Gaps = 39/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGMAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + ++ +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPNCQSPDQYGDNCEVCSATYSPTELIKPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  + +  +       L  +  N++  + +SGL+   +SR    +G +IP 
Sbjct: 186 RDSEHFFFDLPEFSAMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPG 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWRQDSDAELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K + G +        +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSA----ELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
                 I +   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 IDASNSIAQAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            + R L   L+  +P LA +    L    +   ++ ++Q L
Sbjct: 482 NLFRVLMTWLKPVMPSLAERAEAFLN---QQLSWEGIEQPL 519


>gi|28493730|ref|NP_787891.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28476772|gb|AAO44860.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 583

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 189/582 (32%), Positives = 295/582 (50%), Gaps = 82/582 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T + Y N  PHIGHAY ++++DV AR+ R  G D  F +GTDEHG K+ +AA+   
Sbjct: 3   FYITTPVFYVNDIPHIGHAYTLVVSDVFARWQRQSGKDTFFLSGTDEHGLKVLRAAEEKN 62

Query: 67  VTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +T + + D   +  ++ + D++ IS DDF+RTTE RH +  +    ++ +   IY G YS
Sbjct: 63  MTPQGWADLMLKTAWKPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYS 122

Query: 126 GWYSLRDEAY-------YNDDEVYKGADG---------------QYYNAQHNPVQWMEEE 163
           G+Y +  E +         +DE   G  G                +       ++   E+
Sbjct: 123 GYYCVSCEEFKTVSQSALPNDESVNGTLGKDPRTCSLPQGEEQNYFCEVHGCQLEHFTEK 182

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            YFFRLSA+ D+LL  Y+ +P+FI P    NEV+ FVK+G+ DLS+SR +F WGI++P D
Sbjct: 183 NYFFRLSAFTDRLLDLYKKNPDFIEPKSAYNEVVQFVKNGVSDLSISRSSFTWGIEVPWD 242

Query: 224 PQYIMYVWIDA------------------LTNYLTTTGYLDNPDGS-------------- 251
             +++YVW DA                   T          +   +              
Sbjct: 243 EGHVVYVWFDALINYLTPVMSAKEELPIDGTTPGGAEFCTHSNLNTLESSIPGPGGSAES 302

Query: 252 -------------------KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
                                K+WPA  H+IGKDILRFHA+ WPA L++A LP+P+K+F+
Sbjct: 303 DRLSHTLSTSADNAALTSPFKKYWPAS-HIIGKDILRFHAVIWPAMLMAAGLPVPEKIFA 361

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           HG++L  G+K+SKS    I P ++ +  GVDA+RY+ +R+   G+D  +  + +    N+
Sbjct: 362 HGWLLVDGQKMSKSKLTGIKPQDLTDIFGVDAVRYYFLRQPVFGQDYSFSIESIAACYNS 421

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LA+G GNL  R  SM     +G +  P  ++E DES+L  C  V     + +   + H 
Sbjct: 422 ELADGYGNLACRLSSMYTTYLNGRVIVPKIYSEEDESLLQACKDVSDRACKAIDELIPHI 481

Query: 413 ALAQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           A+A++ SL    + Y   Q+PW L KK + +R + VLY  +  +  + ILL   +P++ N
Sbjct: 482 AMAEIWSLAVRANTYTTRQQPWSLHKKQDDERLACVLYTALRALSTITILLSPIMPRITN 541

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFML---HKTFDPIFPRF 510
           K++     AD     Q++  R   G  L        P+FP+ 
Sbjct: 542 KLWSAFG-ADGGVSQQNI--RSAWGGKLSDKVSLIPPMFPKI 580


>gi|255011397|ref|ZP_05283523.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149211|ref|ZP_07811404.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137978|gb|EFR55338.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 679

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 239/542 (44%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +VLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKENVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+ K HH+     +K + +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKTLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y      +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMKETKHWYLPLDKHETWLRQWILEDHKEWRPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V S+ F+  +G+KIS S    +   E +E+     D LRY 
Sbjct: 301 CIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G  T+ D+
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGELTDYDK 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T+L
Sbjct: 421 ETLKEFSDVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGTIL 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            ++++++  LAI  + F+P  + ++  +L +   +      +  L  G  L+K  + +F 
Sbjct: 481 NISLQLVANLAIAFEPFLPFSSERLRRMLNMDSFDWAELGRNDLLPAGHQLNKP-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|114563417|ref|YP_750930.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299549|sp|Q081H3|SYM_SHEFN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114334710|gb|ABI72092.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 683

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 233/544 (42%), Gaps = 48/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   
Sbjct: 3   KSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  + Q  +  +      +I +D+F  T  + +      ++ K+ D G I  
Sbjct: 63  AQQMGITPEEMIAQVQKEHQQDFADFNIQFDNFHSTHSEENRILASDIYLKLRDGGYIKT 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------ 158
              S  Y      +  D            E   G +     A ++               
Sbjct: 123 KTISQLYDPEKLMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  + +S     L  E  N++  + + GLK   +SR    +
Sbjct: 183 PIMKDTEHFFFDLPAFEGMLKEWIQSGS---LQQEMANKLNEWFEQGLKQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSLDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A +  P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGIRKPTSVYAHGYVTVNGSKMSKSKGTFIKARTYLDNLDPEYLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVN+DL   + NL SR+   I K +DG +      + +D 
Sbjct: 360 AAKLNSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKVTDSSLTDI 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            +        + I E  + +   +A+ ++++L    + Y     PW+L K +   D A  
Sbjct: 420 FLAKS-----EVIAELYETREFGKAMREIMALADIANAYVADAAPWQLVKQDDKQDEAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +PKLA  +   L +      + +L Q L  G  +  TF  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPKLAENVEGFLQLT---LTWDNLGQDL-AGHEI-ATFKAL 529

Query: 507 FPRF 510
             R 
Sbjct: 530 MQRI 533


>gi|237725990|ref|ZP_04556471.1| methionyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229435798|gb|EEO45875.1| methionyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 694

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 239/544 (43%), Gaps = 37/544 (6%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+ + ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I
Sbjct: 15  MENKFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPI 74

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+     ++      IS+D + RTT K HH+     +K + DK +
Sbjct: 75  TIRAKKEGITPQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSE 134

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------- 158
             +     +Y      +  D  +             G   +      +P           
Sbjct: 135 FIEKTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKCGTSLSPTDLINPKSAIS 194

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + ++  L  ++  L  +   + +   P     +  S++  GL+  ++SR  
Sbjct: 195 GSQPVMRETKHWYLPLDKHEGWLREWILENHKEWRPNVY-GQCKSWLDMGLQPRAVSRD- 252

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
            DWGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + 
Sbjct: 253 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLIHFIGKDNIV 312

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V S+ F+  +G+KIS S    +   E +++     D LR
Sbjct: 313 FHCIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLQDFPGKQDVLR 372

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 373 YVLTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRALVLTHKYFDGKVPVCGELTDY 432

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+  L   + V  E+ + +       A  + ++L    ++Y    +PW+L KT+ DR +T
Sbjct: 433 DKETLKEFADVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLVKTDMDRVAT 492

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +L + ++++  LAI  + F+P  + K+  +L +             L  G  L+K  + +
Sbjct: 493 ILNIALQLVANLAIAFEPFLPFSSEKLRQMLNMETFEWDQLGRTDLLAEGHQLNKA-ELL 551

Query: 507 FPRF 510
           F + 
Sbjct: 552 FEKI 555


>gi|110639074|ref|YP_679283.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163345|sp|Q11RM3|SYM_CYTH3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110281755|gb|ABG59941.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 689

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 143/553 (25%), Positives = 246/553 (44%), Gaps = 45/553 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M  +  +  I++A+ Y N   HIGH A   + AD+ ARF R  G +VLF  G+DEHG  I
Sbjct: 1   MTNKPSRYTITSALPYANGPVHIGHLAGVYVPADIYARFLRSKGENVLFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+     +   + L IS+D + RT+ K H +T    +KK+ + G 
Sbjct: 61  TIRAKKEGVTPQQVVDKYHVQIKQSFEELGISFDIYSRTSSKIHAETSSEYFKKLYEDGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----- 162
             +     +Y  + E +  D  +             G   +   +  +P + +       
Sbjct: 121 FIEQTSEQYYDPKAEQFLADRYIIGTCPKCGNENAYGDQCEKCGSTLSPSELINPRSTLS 180

Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNE-------VISFVKSGLKDLSLSRKTF 214
            E    + + +    L  YE   +  +  + +N          S++  GL+  +++R   
Sbjct: 181 GEKPVMKSTKHWFLPLDQYEPWLKQWILEDHKNWKTNVYGQCKSWLDQGLQPRAVTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPAD----L 260
           DWG+ +P       ++YVW DA   Y++              + + +   FW  D    +
Sbjct: 240 DWGVPVPVAGAEGKVLYVWFDAPIGYISAAKDYFKNSEIKAVHKNNTWEDFWKKDDTKLV 299

Query: 261 HVIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           H IGKD + FH I +PA      +  LP  V ++ F+  +G+KIS S    +   E +EE
Sbjct: 300 HFIGKDNIVFHCIIFPAMLKAEGSYILPDNVPANEFMNLEGDKISTSRNWAVWLHEYLEE 359

Query: 320 VG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                D LRY L       KD  +     + R N +L    GN V+R++ +  K YD +I
Sbjct: 360 FKGKQDVLRYALCANAPETKDNDFTWRDFQARNNNELVAIYGNFVNRALVLTHKYYDSVI 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G    SDE ++ +      +I  +++      AL  ++ L    ++Y    +PW++ 
Sbjct: 420 PALGKLEASDEGVIMMLKEFPAKIAASIEQYRFREALGFMMDLARLGNKYLADTEPWKIY 479

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           K NP+R  T+L++ +++   LAI+ + F+P  + K+F +L +             LK G 
Sbjct: 480 KENPERVKTILHIGLQIAANLAIVSEPFIPFTSAKLFTMLNLKANTWNNAGTIDLLKAGD 539

Query: 498 MLHKTFDPIFPRF 510
            L  T + +F + 
Sbjct: 540 QLG-TAELLFDKI 551


>gi|33152186|ref|NP_873539.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|68565995|sp|Q7VMC9|SYM_HAEDU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33148408|gb|AAP95928.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 684

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 128/544 (23%), Positives = 234/544 (43%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  V F    D HG  I  
Sbjct: 1   MSNKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGHQVYFVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  + +   +        +IS+D++  T  + + +    ++K + DKG I 
Sbjct: 61  NAAKQGITPEQLIAKAKADHIADFQSFNISFDNYHSTHSEENRNITTAMYKTLRDKGLIK 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------- 162
               S  +    + +  D            E   G + +   + ++P+  +         
Sbjct: 121 TRVISQLFDPEKQMFLPDRFVKGTCPKCQAEDQYGDNCEVCASTYSPMDLINPHSVVSGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  E +FF L  ++  L ++  S     L  +  N++  + +SGL+   +SR    
Sbjct: 181 TPIVKQSEHFFFDLPNFEAMLKTWTHSGS---LQPQIANKMQEWFESGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP------ADLHVIGKDILR 269
           +G  IPD      YVW+DA   Y+ +   L +  G   + +          H IGKDI+ 
Sbjct: 238 FGFPIPDTENKFFYVWLDAPIGYMASFKNLCDRTGLNYEEFWQKESKTELYHFIGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L   +   P  +F+HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHSLFWPAMLEGCDQRKPTNIFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYY 357

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++    +D   + D   +RVN+D+ N + NL SR+ S I K + G +         DE
Sbjct: 358 AAKLNERIEDLDLNLDDFVQRVNSDIVNKLVNLASRNASFITKRFAGNLADK----LEDE 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           ++ +        I ++ + +  ++A+  ++ L  + ++Y D + PW + K          
Sbjct: 414 ALFAEFVAQASNIADHYEAREYNKAIRLIMDLCDKANKYVDDKAPWVIAKQADREAELHA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + +E+ R L   L+  +P+LA +    L        + ++   L         F  +
Sbjct: 474 VCSMGIELFRILISYLKPVLPQLATRAEAFLQTE---LRWDNIASPLL--NQNVAPFKSL 528

Query: 507 FPRF 510
           F R 
Sbjct: 529 FSRL 532


>gi|114319978|ref|YP_741661.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312171|sp|Q0AAG6|SYM_ALHEH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114226372|gb|ABI56171.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 675

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 138/539 (25%), Positives = 229/539 (42%), Gaps = 45/539 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+ ARF RL G D  +    D HG  I   A+ 
Sbjct: 3   RKILVTSALPYANGPIHLGHLVEYIQTDIWARFQRLRGHDCHYVCADDAHGTPIMLKARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +     +       I +D++  T    +     +++ +++  G I +   
Sbjct: 63  RGITPEALIAEVGEEHQRDFADFLIEFDNYHTTHSDENRYFAELIYSRLNQAGHIDRKVI 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQW-------------- 159
              Y  + E +  D            E   G   +   A + P +               
Sbjct: 123 KQAYDPKLEMFLPDRYIKGECPRCGAEDQYGDSCEACGATYTPAELKNAVSVVSGERPVE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFFRL  ++  L           L  E  N++  + K GL+   +SR    +G +
Sbjct: 183 RESEHYFFRLQDFEAMLRE---WASPEHLQAEVANKLAEWFKEGLRSWDISRDAPYFGFR 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IPD      YVW+DA   Y+ +  +L    G     W          H IGKDI+ FHA+
Sbjct: 240 IPDTEDKYFYVWLDAPIGYMASFKHLCERKGLDFDDWWGPDSTAELYHFIGKDIIYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE- 332
           +WPA L  A    P ++ +HGF+   G+K+SKS G  I     ++ +  + LRY+   + 
Sbjct: 300 FWPAMLHGAGFRKPTEICAHGFLTVNGQKMSKSRGTFIMARTWLDHLNPEYLRYYFAAKL 359

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A   D     D   +RVNADL   + N+ SR    I K ++G +      T  D ++  
Sbjct: 360 SASVHDLDLSLDDFTQRVNADLVGKLVNIASRCAGFIHKRFEGRLGE----TLDDPALYR 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYV 450
             +   + I E  + +   RA+ ++++L  + ++Y D QKPW L K     DR   +   
Sbjct: 416 QFTAAGEHIAELYEKREFSRAMREIMALADQANQYVDEQKPWVLAKQEDQADRVQDICTQ 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + + R L + L+  +P+LA      L + ++  C+      L     + K F P+  R
Sbjct: 476 GLNLFRVLVVYLKPVLPRLAADAEAFLNLPEQ--CWADAKTPLL-DHGIRK-FKPLMTR 530


>gi|288929286|ref|ZP_06423131.1| methionine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329388|gb|EFC67974.1| methionine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 687

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 137/545 (25%), Positives = 239/545 (43%), Gaps = 38/545 (6%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+++  ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV+F  G+DEHG  
Sbjct: 7   MEQKQYKRTTITAALPYANGGVHIGHLAGVYVPADIYARYMRLKNEDVVFIGGSDEHGVP 66

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  GV+ +  VD+     +   +   IS+D + RTT   HH      +KK+ + G
Sbjct: 67  ITIRARKEGVSPQDVVDRFHAMIKKSFEDFGISFDIYSRTTSPTHHQLASDFFKKLYEDG 126

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +      +P +        
Sbjct: 127 KLLEKETEQYYDEEAHQFLADRYIMGECPHCHNEGAYGDQCEKCGRDLSPTELLHPRSTI 186

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L  YQD L  +     +   P     +  S++   L+  +++R 
Sbjct: 187 SGSQPVLKKTKNWYLPLDKYQDWLKEWILEGHKEWRPNVY-GQCKSWLDLDLQPRAMTRD 245

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDIL 268
             DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD +
Sbjct: 246 -LDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELLPDTWEKWWKDPETRLVHFIGKDNI 304

Query: 269 RFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P          LP+ V ++ F+  + EKIS S    +   E +E+     D L
Sbjct: 305 VFHCIVFPVMLKAHGGYILPENVPANEFLNLEDEKISTSKNWAVWLHEYLEDFPGKQDVL 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     ++R N +L    GN V+R++ +  K + G +P  G   E
Sbjct: 365 RYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFGGRVPACGELNE 424

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D+  L     V +++   +       A  + + L    +RY    +PW++ KT+P R  
Sbjct: 425 VDKQALDEFKDVKEKVEGLLDTYKFRDAQKEAMMLARIGNRYITECEPWKVWKTDPKRVE 484

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           T+LY++++++  LAI  + F+P  + K+  +L +   +       + LKPG  L +  + 
Sbjct: 485 TILYISLQLVANLAIAFEPFLPFSSAKLRSMLNMEGVDWNVLGNTEILKPGHQLAEP-EL 543

Query: 506 IFPRF 510
           +F + 
Sbjct: 544 LFEKI 548


>gi|254513805|ref|ZP_05125866.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676048|gb|EED32413.1| methionyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 684

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 125/541 (23%), Positives = 234/541 (43%), Gaps = 45/541 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + ++ +++A+ Y N   H+GH  E +  D+  RF R  G +  +    D HG  I  +
Sbjct: 3   QAKRRILVTSALPYANGPLHLGHILEQVQTDIWVRFQRSRGHECHYICADDAHGTAIMLS 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  ++   ++    ++   IS+D+F  T           +++++   G I +
Sbjct: 63  AERQGITPEQQIEAIHKDHLSASNDFAISFDNFYSTHSDETRHWAETIYQRLQAAGAISE 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
              +  Y      +  D  +             G + +   A ++P + ++         
Sbjct: 123 REITQAYDPEKGLFLADRFIKGSCPKCKTPDQYGDNCEACGATYSPTELIDPVSALSGAT 182

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                   +FFRL  +   L  +  S     L     N++  +    L++  +SR    +
Sbjct: 183 PVERQSRHFFFRLPMFAGMLREWIASGT---LQDAVANKLREWTDGELQEWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G  IP +     YVW+DA   Y+ +   Y +    +   FW         H +GKDI+ F
Sbjct: 240 GFTIPGETDKYFYVWLDAPIGYMGSFQNYCERSGVTFDDFWQPGGDTELYHFVGKDIINF 299

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L SA L  P  VF HGF+   G K+SKS G  I+    ++ +  + LRY+  
Sbjct: 300 HGLFWPAMLHSAALRTPTGVFVHGFLTVDGTKMSKSRGTFINARHYLDHLDAEYLRYYFA 359

Query: 331 REIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + +   +RVN+D+   + N+ SR    + K +D  + +  +  E    
Sbjct: 360 AKLGAGVDDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFDNQMSSSCSEPE---- 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +L   +   + I +  +++   +A+  ++ L    ++Y D  KPW + K +P++A+ V  
Sbjct: 416 LLQSFTEAGEGIAKAYEDREFSKAVRLIMELADRANQYIDQHKPWVMAK-DPEQAAQVQA 474

Query: 450 VT---VEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
           V    +   R L I LQ  +PK+A +  + L   +  E      LD +L     L +  D
Sbjct: 475 VCSTGINCFRMLMIYLQPVLPKMAERAANYLRCNLDWEQNSSLLLDHQLATFEPLVQRVD 534

Query: 505 P 505
           P
Sbjct: 535 P 535


>gi|242808514|ref|XP_002485180.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715805|gb|EED15227.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 578

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 186/491 (37%), Positives = 261/491 (53%), Gaps = 15/491 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
            ++  Y++T I Y NA PH+GH Y M++ DV+ R+ +L G  D +F TGTDEHG KI +A
Sbjct: 49  SQKPFYVTTPIFYVNAAPHVGHLYSMVLGDVIKRWEQLKGNKDAIFLTGTDEHGIKIQQA 108

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ AG+ T+ F D N + F+D+A   +IS D FIRTT++ H D  R  W+ +  +G IY 
Sbjct: 109 AQEAGMDTQAFCDMNCKTFKDLARAANISNDHFIRTTDEAHKDAVRYFWEMLQHRGYIYT 168

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y   +V        G            V+W  E  Y FRLSA++D+
Sbjct: 169 KKHEGWYSVSDEAFYPQSQVEPSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFRDR 228

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +YE +P+FIL       V   V+ GL+DLS+SR      WG+++P D    +YVW+D
Sbjct: 229 LLEFYELNPKFILSKSHMMNVKQAVEEGLQDLSVSRPVERLTWGVRVPGDDSQTIYVWLD 288

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPADLH++GKDI+RFH IYWPAFL++ +LPLP+ V  H
Sbjct: 289 ALINYLTKAGYPFTPGKESDLGWPADLHIVGKDIIRFHCIYWPAFLMALDLPLPRHVLVH 348

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G       K+SKS GNV++P   I+   VD +R+FL      G D  YD   +       
Sbjct: 349 GHWTMNKAKMSKSTGNVVNPFFAIDRFSVDIMRFFLTLRGPLGDDSNYDNSNIVNDYKKY 408

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQ 408
           L  G+GN+  R + +        I            E D           + +  NM+  
Sbjct: 409 LQYGVGNVYQRLMGLTKMQLRPSIEAARSGFTTEPNEYDIEFEQYLHTFPKIVERNMEAF 468

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
               AL +++    +   YF    PW+  K +  R   V Y   E +R   ILLQ FVP+
Sbjct: 469 HSKAALREIVDATMKAQNYFHHSAPWQ-HKDDLSRCYRVFYNVSEYLRIAGILLQPFVPQ 527

Query: 469 LANKIFDILFV 479
            A+++ D + V
Sbjct: 528 KASEVLDRIGV 538


>gi|115398011|ref|XP_001214597.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
 gi|114192788|gb|EAU34488.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
          Length = 578

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 191/532 (35%), Positives = 275/532 (51%), Gaps = 32/532 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y MIIADVL R+  L G  D    TGTDEHG KI +AA
Sbjct: 52  KKPYYVTTPIFYVNAAPHVGHLYTMIIADVLKRWRALAGDTDAQLLTGTDEHGMKIQQAA 111

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+ T+ F D N + F  +A   ++ Y+ FIRTT+  H +  +  W+ +  +G IY  
Sbjct: 112 AAAGMDTQAFCDMNFKTFEALAKAANMDYNHFIRTTDAAHKEAVQYFWEMLDHRGYIYTS 171

Query: 123 CYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA+Q++L
Sbjct: 172 KHEGWYSVSDETFYPQSQVQNSLDPTTGRKRMVSAETGKAVEWSSETNYHFRLSAFQERL 231

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L  Y++   FI P +   +VI  V SGL+DLS+SR     +WGI +P D    +YVW+DA
Sbjct: 232 LELYKTG--FIQPSKYDRDVIRSVSSGLQDLSISRPVERLNWGIPVPGDETQTIYVWLDA 289

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--------RFHAIYWPAFLLSANLPL 286
           L NYLT  GY   P       WPAD+HV+GKDI+        RFH +YWPAFL++ +LPL
Sbjct: 290 LVNYLTKAGYPFPPGQEGRLGWPADVHVVGKDIIRAMLTGTPRFHCVYWPAFLMALDLPL 349

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+ V  HG      EK+SKS GN ++P   ++  GVD +R+FL  +     D  YD   +
Sbjct: 350 PRNVLVHGHWTINHEKMSKSTGNTVNPFFALDRFGVDTMRFFLAYQGGLAGDADYDNSFI 409

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEI 401
            +     L +GIGNL  R++    K+    I    +       E D            ++
Sbjct: 410 IRDYKKLLQSGIGNLTHRAIGCAKKELRTYIVNGTSGGLPPANEDDMVFEETVQETPAKV 469

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++M+      AL +V++LV +  +YF A  PW     NP      L+  +E +R   IL
Sbjct: 470 AKHMEELNPRAALQEVVTLVEKAQKYFHASAPW----QNPTEHQRALFNIIESLRIAGIL 525

Query: 462 LQAFVPKLANKIFDILFVADENRCFQ--SLDQRLKPGFMLHKTFDPIFPRFL 511
           LQ F+P  + ++ D+L V    R     +    L  G  + K    +FP+ +
Sbjct: 526 LQPFMPTKSKELLDLLRVDLSKRTLSDTAFGSDLDYGEGVKKKI--LFPQLI 575


>gi|315230502|ref|YP_004070938.1| methionyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183530|gb|ADT83715.1| methionyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 731

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 140/553 (25%), Positives = 253/553 (45%), Gaps = 58/553 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H GH A   + AD+  R+ RL G DV++  GTDEHG  I   A  
Sbjct: 3   RYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVIYICGTDEHGTPITFRALK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  VD    + +   +   IS+D F RT    H+   +  + +    G + K   
Sbjct: 63  EGKSPREIVDYYYEHIKTTFERAKISFDYFGRTELPVHYKVSQDFFLRALKNGHLVKKVT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  V                                  N   NP+ +
Sbjct: 123 KQAYCEHDKMFLPDRYVIGTCPYCGAEEQRGDQCEVCGRPLTPEILINPRCNICGNPITF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Y+ ++  +Q+KL  + ES+  +      RN V+ ++K GL++ +++R   +WGI 
Sbjct: 183 KDSAHYYIKMQDFQEKLRKWIESNEHWK--PNVRNTVLGWIKEGLEERAITRD-LNWGIP 239

Query: 220 IPDDP----QYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPAD--------LHVIG 264
           +P +       ++YVW +A   Y++ T              K+W A+        +H IG
Sbjct: 240 VPLEDKEMSGKVLYVWFEAPIGYISITIEYFKRIGKEEEWKKYWLANYDGEETRIIHFIG 299

Query: 265 KDILRFHAIYWPAFLLSAN----------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           KD + FHAI+WPAFL+S              LP  + ++ ++  +G+K S S    I   
Sbjct: 300 KDNIPFHAIFWPAFLMSYGKFEDKNGEFKWLLPYDIPANEYLNLEGKKFSTSRNWAIWVH 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E ++E   D LRY+L   +   +D  ++    K ++N +L N +GN V R+++ + + +D
Sbjct: 360 EFLDEFPADYLRYYLTAIMPETRDSDFNFKDFKAKINEELVNILGNFVHRALTFVNRYFD 419

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G +P  G   E D        +  +E+ E +       AL + ++L +  +RYFD Q+PW
Sbjct: 420 GKVPERGELDELDRQAFEEIEKAFEEVGELIAKYRFKDALKRAMALATFGNRYFDYQQPW 479

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           +  KT+  R +T + V++++++ L I+++ F+P    KI+ +L + +  R        + 
Sbjct: 480 KTAKTDKLRTATTVNVSLQIVKALGIIIEPFLPDAGEKIWHLLNLEELKRWE---FTEIP 536

Query: 495 PGFMLHKTFDPIF 507
            G  + K  + +F
Sbjct: 537 AGHKVRKA-EILF 548


>gi|163752281|ref|ZP_02159480.1| methionyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327824|gb|EDP99005.1| methionyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 694

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 136/542 (25%), Positives = 233/542 (42%), Gaps = 48/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ ARF ++ G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKMRGHECHYICADDAHGTAIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q ++  +      +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 64  QQLGMEPEEMIAQVNKEHQQDFADFNIQFDNFHSTHSVENRELASEIYLKLRDSGYIETR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G +     A +NP   +           
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDMINPKSAISGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L A++  L  +  S     L  E  N++  ++K GL+   +SR    +G
Sbjct: 184 IMKDSEHFFFDLPAFEGMLKEWTRSGA---LQDEVANKLDEWLKQGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSTAEVYHFIGKDIINF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HCLFWPAMLEGAGYRKPTNVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG          +D +
Sbjct: 361 AKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKFAKV-----ADTT 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +  V     + I E  + +   +A+ ++++L    + Y     PW+L K     + A  V
Sbjct: 416 LEQVFLGKQEVIAELYEGREFGKAMREIMALADMANAYVADAAPWQLIKQEDTQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA+ +   L        + +L+  L  G  + K F P+ 
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLADDVEAFLQFP---ITWDNLNANL-AGHEIAK-FKPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|242398126|ref|YP_002993550.1| Methionyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264519|gb|ACS89201.1| Methionyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 732

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 140/553 (25%), Positives = 252/553 (45%), Gaps = 56/553 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R +  +++A+ Y N   H GH A   + AD+  R+ RL G DV+F  GTDEHG  I   A
Sbjct: 5   RMRFTVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPITFRA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G + +  VD    + +   +   IS+D F RT    H+   +  + K  +   + K 
Sbjct: 65  LKEGKSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQEFFLKALENEYLIKK 124

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPV 157
                Y   D+ +  D  V                                  N   N +
Sbjct: 125 VEKQAYCEHDKMFLPDRYVIGTCPYCGAEEQRGDQCEVCGHPLTPEKLINPKCNICGNSI 184

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + +   Y+ R+  +Q+KL  +      +      RN V+ ++  GL++ +++R    WG
Sbjct: 185 TFRDSAHYYIRMQEFQEKLKDWVLRQEHWK--SNVRNTVLGWINEGLEERAITRD-LGWG 241

Query: 218 IKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPAD-----LHVIG 264
           I +P + +     ++YVW +A   Y++ T          D  K  ++  D     +H IG
Sbjct: 242 IPVPLEDEDVKGKVLYVWFEAPIGYISITIEHFKKLGKEDEWKKYWFNIDGETRVIHFIG 301

Query: 265 KDILRFHAIYWPAFLLSAN----------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           KD + FHAI+WPAFL++              LP  + ++ ++  +G K S S    I   
Sbjct: 302 KDNVPFHAIFWPAFLMAYGKYKDEKGEFEWNLPYDIPANEYLNLEGRKFSTSRNWAIWVH 361

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E ++    D LRY+L   +   +D  +     KK++N +L N +GN V R+++ + + +D
Sbjct: 362 EFLDAFPADYLRYYLTAIMPETRDSDFSLGDFKKKINEELVNNLGNFVHRALTFVNRYFD 421

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G +P  G   + D   L    +  +E+   +       AL +V++L    ++YFD Q+PW
Sbjct: 422 GKVPETGELDDLDRKALKEIEKTFEEVNRLISRYQFKEALKRVMALAIFGNQYFDYQRPW 481

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           +  KT+  R  T + V++++++ L ILL+ F+P  + KI+ +L + +E + ++ +   L+
Sbjct: 482 KTAKTDKVRTGTTINVSLQIVKALGILLEPFLPDASEKIWHLLNI-EEVKRWEFIP--LE 538

Query: 495 PGFMLHKTFDPIF 507
            G  + K  + +F
Sbjct: 539 AGQKVRKA-EILF 550


>gi|292488750|ref|YP_003531637.1| methionyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899904|ref|YP_003539273.1| methionyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199752|emb|CBJ46873.1| methionyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554184|emb|CBA21412.1| Methionyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172904|emb|CBX81160.1| Methionyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 676

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 126/521 (24%), Positives = 227/521 (43%), Gaps = 39/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  +   S+  +      DISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  IGIAPEQMIADMSQEHQTDFAGFDISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + +E +          
Sbjct: 126 SQLYDAEKGMFLPDRFVKGTCPNCKSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  + +  +       L  +  N++  + +SGL+   +SR    +G +IP+
Sbjct: 186 RDSEHFFFDLPEFSAMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPN 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDRRGDIDFDAFWQQDSDAELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K + G +        +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSA----ELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
                 I     ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 VDASDSIARAWASREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            + R L   L+  +P LA +    L    +   ++ ++Q L
Sbjct: 482 NLFRVLMTWLKPVMPSLAERAEAFLN---QQLSWEGIEQPL 519


>gi|154493526|ref|ZP_02032846.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC
           43184]
 gi|154086736|gb|EDN85781.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC
           43184]
          Length = 679

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 236/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RTT   H       ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGISFDIYSRTTSATHRQVASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLINPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 QPVMKETKHWYLPLDKWEPFLRQWILEGHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPESWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPAMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTEKYFEGKVPAAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L+  + V  ++   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLTDFANVKADVERLLDTYHFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMARVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K+ + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGSTDLLEAGHQLGKS-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|260909882|ref|ZP_05916571.1| methionine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635986|gb|EEX53987.1| methionine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 750

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 137/545 (25%), Positives = 240/545 (44%), Gaps = 38/545 (6%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+++  ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL   DV+F  G+DEHG  
Sbjct: 70  MEQKQYKRTTITAALPYANGGVHIGHLAGVYVPADIYARYMRLKKEDVVFIGGSDEHGVP 129

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  GV+ +  VD+     +   +   IS+D + RTT   HH      +KK+ + G
Sbjct: 130 ITIRARKEGVSPQDVVDRFHAMIKKSFEDFGISFDIYSRTTSPTHHQLASDFFKKLYEDG 189

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +      +P +        
Sbjct: 190 KLLEKETEQYYDEEAHQFLADRYITGECPHCHNEGAYGDQCEKCGRDLSPTELLHPRSTI 249

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L  YQD L  +     +   P     +  S++   L+  +++R 
Sbjct: 250 SGSQPVLKKTKNWYLPLDKYQDWLKEWILEGHKEWRPNVY-GQCKSWLDIDLQPRAMTRD 308

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDIL 268
             DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD +
Sbjct: 309 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDTWEKWWKDPETRLVHFIGKDNI 367

Query: 269 RFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P          LP+ V S+ F+  + +KIS S    +   E +E+     D L
Sbjct: 368 VFHCIVFPVMLKAHGGYILPENVPSNEFLNLEDDKISTSKNWAVWLHEYLEDFPGKQDVL 427

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     ++R N +L    GN V+R++ +  K +DG +P  G   +
Sbjct: 428 RYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFDGRVPACGELND 487

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D+  L     V +++   +       A  + + L    +RY    +PW++ KT+P R  
Sbjct: 488 VDKQALDEFKDVKEKVESLLDTYKFRDAQKEAMVLARIGNRYITECEPWKVWKTDPKRVE 547

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           T+LY++++++  LAI  + F+P  + K+  +L +   +       + LKPG  L +  + 
Sbjct: 548 TILYISLQLVANLAIAFEPFLPFSSAKLRRLLNMEGVDWNALGNTEILKPGHQLAEP-EL 606

Query: 506 IFPRF 510
           +F + 
Sbjct: 607 LFEKI 611


>gi|161501798|ref|NP_761825.2| methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|61216347|sp|Q8D8F2|SYM_VIBVU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|319999503|gb|AAO11352.2| Methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 690

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 227/542 (41%), Gaps = 47/542 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ
Sbjct: 10  QRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQ 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  +   S   +      DIS+D++  T    + +    ++ ++   G I    
Sbjct: 70  QMGMSPEEMIAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 129

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ-------------- 158
            S  +    E +  D            E   G +       ++P +              
Sbjct: 130 ISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 189

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G 
Sbjct: 190 MKDSEHFFFDLPQFESMLKEWTRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGF 246

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP +     YVW+DA   Y+ +   L +        ++W  D      H IGKDI+ FH
Sbjct: 247 EIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  VF HG++   G K+SKS G  +     +E +  + LRY+   
Sbjct: 307 SLFWPAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAA 366

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  +   D   + +   +RVNAD+ N I NL SR+   I K ++G +       E     
Sbjct: 367 KLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEF 426

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           ++   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          + 
Sbjct: 427 VAAADR----IAELYEAREFGRAIRELTALADKANQYVDEKAPWVVAKQEGKDQELQEIC 482

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V + + R L   L+  +P LA +    L    E   ++ + Q L     +   F  +F 
Sbjct: 483 SVGINLFRVLMTYLKPVMPALAARTEAFLN---EELTWEGVAQPLTA-HEITA-FKALFN 537

Query: 509 RF 510
           R 
Sbjct: 538 RI 539


>gi|188533441|ref|YP_001907238.1| methionyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|226710906|sp|B2VIF6|SYM_ERWT9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|188028483|emb|CAO96345.1| Methionyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 676

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 126/521 (24%), Positives = 224/521 (42%), Gaps = 39/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  +   S+  +      +ISYD++  T  + + +   +++ ++ + G I     
Sbjct: 66  MGVAPEQMIADMSQEHQTDFAGFNISYDNYHSTHSEENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + +E +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPNCKSPDQYGDNCEVCSATYSPTELIEPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  + +  +       L  +  N++  +  SGL+   +SR    +G +IP 
Sbjct: 186 RDSEHFFFDLPEFSAMLQAWTRSGALQEQVANKMQEWFDSGLQQWDISRDAPYFGFEIPG 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDAFWQKDSDAELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K + G +        +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLSA----ELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
                 I +   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 IDASTSIAQAWSSREFSRAVREIMALADAANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            + R L   L+  +P LA +    L        +  ++Q L
Sbjct: 482 NLFRVLMTWLKPVMPSLAERAEAFLNQP---LTWDGIEQPL 519


>gi|145299044|ref|YP_001141885.1| methionyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851816|gb|ABO90137.1| methionyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 677

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 227/544 (41%), Gaps = 46/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +   + ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   
Sbjct: 3   TDPRTMLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGHQVHFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S+  +      +IS+D++  T    + +   +++ ++ D G I  
Sbjct: 63  AQQMGITPEEMIAAVSKEHQTDFAGFNISFDNYHSTHSDENRELAELIYGRLKDGGFIKG 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
              +  +      +  D  V             G + +     ++P + ++         
Sbjct: 123 RTITQLFDPEKSMFLPDRFVKGTCPKCKSPEQYGDNLRQLRCHYSPTELIDPKSAVSGAT 182

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L  ++  L  +        +  E  N++  + +SGL+   ++R    +
Sbjct: 183 PVMKDSEHFFFDLPQFETWLAGWVRGSGA--IQEEMANKMQEWFESGLQQWDITRDAPYF 240

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILR 269
           G +IP  P    YVW+DA   Y+ +   L N         +W AD      H IGKDI  
Sbjct: 241 GFEIPGAPGKYFYVWLDAPIGYMASFKNLCNKRGDIDFDSYWKADSEAELYHFIGKDIAY 300

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WP+ L  A    P KV  HG++   G K+SKS G  I     +  +  + LRY+ 
Sbjct: 301 FHCLFWPSMLEGAGFRKPTKVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYY 360

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + D    RVNAD+ N + NL SR+   I K +DG +    A T ++ 
Sbjct: 361 AAKLNSRIDDLDLNLDDFVARVNADVVNKLVNLASRNAGFIAKRFDGKL----AATCAEP 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +  +     I E  + +   RA+ ++++L  + +RY D + PW L K          
Sbjct: 417 ELYAEFANASASISEAYEAREFSRAIREIMALADKANRYVDEKAPWVLAKQEGADAELQA 476

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + + R L   L+  +P LA +    L    E   +  +   L     L   F  +
Sbjct: 477 VCSVGINLFRVLMAYLKPVMPLLAERAEAFLG---ETLTWDGVALPLT-NHQLT-PFKAL 531

Query: 507 FPRF 510
           F R 
Sbjct: 532 FSRI 535


>gi|150024169|ref|YP_001294995.1| methionyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|187647753|sp|A6GVQ2|SYM_FLAPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|149770710|emb|CAL42174.1| Methionine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 686

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 140/546 (25%), Positives = 247/546 (45%), Gaps = 42/546 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  ++  I+ A+ Y N   HIGH A   + +D+ +R+ RL G DV F  G+DEHG  I+
Sbjct: 2   IQNPKRYTITAALPYTNGPIHIGHLAGVYMPSDIYSRYLRLQGKDVAFMCGSDEHGVAIS 61

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+     R       IS+D++ RT+ K HHDT    +KK+ DKGD 
Sbjct: 62  MKAKKEGITPQEVIDKYDGIIRKSFVDFGISFDNYSRTSAKIHHDTASEFFKKLYDKGDF 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +      Y  + + +  D  V             G   +   +  N    +  +     
Sbjct: 122 IEEVTEQLYDAKADQFLADRFVVGTCPKCGNEEAYGDQCEKCGSTLNATDLINPKSTITG 181

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +F  L  Y D L  +     +         +V S++  GL+  +++R   
Sbjct: 182 ETPIMKSTKHWFLPLDRYSDFLTKWILEGHKSDWKPNVYGQVKSWIDGGLEPRAVTRD-L 240

Query: 215 DWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI   +       +YVW DA   Y++ T      +G   + +  +     +H IGKD 
Sbjct: 241 DWGIDVPVAGAEGKKLYVWFDAPIGYISATKEWAAREGKDWELYWKNEDTKLVHFIGKDN 300

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +PA      +  LP  V ++ F+  +G K+S S    +   E +E+     D 
Sbjct: 301 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQDV 360

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N +LA   GN ++R V +  K Y+G++PTP  F+
Sbjct: 361 LRYALTANAPESKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYEGVVPTPNKFS 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE+ L+        I  +++      AL +++++    ++Y   ++PW++ KT+P+R 
Sbjct: 421 EVDEATLTELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKTDPERV 480

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHK 501
            T +YV +++   L +L + F+P  A K+  +L + D    +  +      +  G  + +
Sbjct: 481 KTQMYVALQIATALRVLCEPFLPFTAEKLNKMLKI-DAKLSWNDVTTNSDLILAGHKIGE 539

Query: 502 TFDPIF 507
             + +F
Sbjct: 540 -GEILF 544


>gi|256822909|ref|YP_003146872.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796448|gb|ACV27104.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 674

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 126/545 (23%), Positives = 236/545 (43%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ +++A+ Y N   HIGH  E +  D+  RF +  G   ++    D HG  +  
Sbjct: 1   MSSQRKILVTSALPYANGDIHIGHLLEYVQTDIWVRFQKSRGHQCIYVCADDTHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G T + F+ ++ +          I +D+F  T      +  + ++ K+ + G I 
Sbjct: 61  RAQKEGKTPEDFIKESHQAHEQDFADCLIGFDNFHSTHSPESKELTQGIYLKLKENGHIS 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ----------- 158
               +  +    E +  D            E   G +     A ++P +           
Sbjct: 121 SKTINQLFDPEKEMFLPDRFVKGTCPKCGSEDQYGDNCDACGATYSPTELKNPKSAVSGA 180

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L  ++  L  +     +  +  E +N++  ++   L+   +SR    
Sbjct: 181 TPILKESEHFFFDLKGFEGFLREWL--GADGHVQSEVQNKMNEWLDD-LRQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +     YVW+DA   Y+ +   L +        +FW  D      H IGKDI+
Sbjct: 238 FGWEIPGEKGKYFYVWLDAPIGYMASFKNLCDKRDDLNFDEFWGKDSDAEVYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WP+ L  A    P  V++HGF+   G+K+SKS G  I     +     + LRY+
Sbjct: 298 YFHTLFWPSVLDGAGYRTPSAVWAHGFVTVNGQKMSKSKGTFIKARTYLNHFRPEFLRYY 357

Query: 329 LVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++   D    + +   +RVN+DL   + N+ SR    I K +D  +      +  +
Sbjct: 358 YAAKLSNRIDDFDLNLEDFVQRVNSDLVGKLVNIASRCAGFITKQFDSNLSD----SIIE 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAS 445
             ++   +    E+ ++ +N+   RA+  +++L  + + Y   ++PW L K +   +RA 
Sbjct: 414 PELIKQFTEASDELAQHYENRDFGRAVKHIMALADKANAYIANEEPWNLVKNDETKERAH 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + + L   L   +P+LA K+ D L +  ++  + S    L  G  ++K F P
Sbjct: 474 QVCSLGINMFKILTAYLAPVLPELAGKVQDFLKL--DSLKWASAQDVLT-GHEINK-FKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 MMQRI 534


>gi|60683709|ref|YP_213853.1| methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313244|sp|Q5L7I8|SYM_BACFN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|60495143|emb|CAH09964.1| putative methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 679

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 239/542 (44%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   DVLF  G+DEHG  I  
Sbjct: 3   KNFKRTTVTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   IS+D + RT+ K HH+     +KK+ +KG+  
Sbjct: 63  RAKKEGITPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y      +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMKETKHWYLPLDKHETWLRQWILEEHKEWRPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETRLVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +PA      +  LP  V S+ F+  +G+KIS S    +   E +E+     D LRY 
Sbjct: 301 CIVFPAMLKAEGSYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN V+R++ +  K ++G +P  G   + D+
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQKYFEGKVPAAGELIDYDK 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   S V  E+ + +       A  + ++L    ++Y    +PW+L KT+ +R  T+L
Sbjct: 421 ETLKEFSDVKAEVEKLLNVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVGTIL 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            ++++++  LAI  + F+P  + ++  +L +   +      +  L  G  L+K  + +F 
Sbjct: 481 NISLQLVANLAIAFEPFLPFSSERLRQMLNMDSFDWAELGRNDLLPAGHQLNKP-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|52425686|ref|YP_088823.1| methionyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|68565974|sp|Q65S22|SYM_MANSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52307738|gb|AAU38238.1| MetG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 686

 Score =  342 bits (877), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 133/545 (24%), Positives = 236/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I 
Sbjct: 1   MSNQHRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  +              +IS+D++  T  + + +   +++ ++ + G I
Sbjct: 61  LKADQMGITPEQLIADVKEKHYADFCGFNISFDNYHSTHSEENRELSELIYSRLKENGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                S  +      +  D            E   G + +  +A ++P + +        
Sbjct: 121 KSRTISQLFDPEKSMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPTELINPRSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L +++  L  +   +    L  E  N++  +  +GL+   +SR   
Sbjct: 181 ATPVIKESEHFFFDLPSFESMLKEW---NRSGALQSEVANKMQEWFDAGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G KIP       YVW+DA   Y+ +        +    +FW  D      H IGKDI+
Sbjct: 238 YFGFKIPGTENKYFYVWLDAPIGYMASFKNLCKRENLDFDRFWNKDSNTELYHFIGKDIM 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  AN   P  +F HG++   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 298 YFHSLFWPAMLDGANYRKPTNIFVHGYVTVNGEKMSKSRGTFIQAATYLKHLDPECLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++    D   + D   +RVN DL N + NL SR+   I K +DG +         D
Sbjct: 358 YAAKLSNRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNAGFIQKRFDGKLADK----LED 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ES+ +      ++I    +N+   +A+ ++++L  + ++Y D + PW + K         
Sbjct: 414 ESLFAEFIAQSEQIAAYYENREFGKAIREIMALTDKANKYVDDKAPWVIAKEEGREAELQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + +++ R L   L+  +PKLA +    L        + +L Q L         F  
Sbjct: 474 AVCSMGIQLFRVLMGYLKPVLPKLAERSEAFLQAE---LTWDNLAQPLL--NHGIAPFKA 528

Query: 506 IFPRF 510
           +F R 
Sbjct: 529 LFSRL 533


>gi|291618086|ref|YP_003520828.1| MetG [Pantoea ananatis LMG 20103]
 gi|291153116|gb|ADD77700.1| MetG [Pantoea ananatis LMG 20103]
          Length = 677

 Score =  342 bits (877), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 231/538 (42%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRELAGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + ++ +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  +            L  +  N++  + +SGL+   +SR    +G +IP 
Sbjct: 186 RDSEHFFFDLPSFSEMLRAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPG 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDINFDEFWQQDSTTELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKLSA----ELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I E   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 LDASEKIGEAWASREFGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P L+ +    L        + ++ Q L     +   F  ++ R 
Sbjct: 482 NLFRVLMTWLKPVMPSLSARAEAFLNTE---LHWDAIQQPLL-NHQV-APFKALYGRI 534


>gi|327394485|dbj|BAK11907.1| methionyl-tRNA synthetase MetG [Pantoea ananatis AJ13355]
          Length = 677

 Score =  342 bits (877), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 231/538 (42%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRELAGLIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + ++ +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  +            L  +  N++  + +SGL+   +SR    +G +IP 
Sbjct: 186 RDSEHFFFDLPSFSEMLRAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPG 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +  G     +FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDINFDEFWQQDSTTELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K +DG +        +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKLSA----ELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I E   ++   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 LDASEKIGEAWASREFGRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P L+ +    L        + ++ Q L     +   F  ++ R 
Sbjct: 482 NLFRVLMTWLKPVMPSLSARAEAFLNTE---LHWDAIQQPLL-NHQV-APFKALYGRI 534


>gi|195446223|ref|XP_002070684.1| GK10894 [Drosophila willistoni]
 gi|194166769|gb|EDW81670.1| GK10894 [Drosophila willistoni]
          Length = 581

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 174/498 (34%), Positives = 268/498 (53%), Gaps = 18/498 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DVL  TGTDEHG KI +AA   
Sbjct: 22  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRHPNADVLLCTGTDEHGTKIQQAAAGH 81

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + D+ S+ +RD+     I  DDFIRTTE+RH       W+K+ D G IY   YS
Sbjct: 82  KVPVGQYCDEISQRYRDVFQAAHIQNDDFIRTTEERHKQAVSHFWRKLHDNGHIYSAAYS 141

Query: 126 GWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 142 GWYCVSDEVFLTDSQLRLDEASGMRYSLESGHPVEWTEETNYMFRLSQFQD-DVRHWVKQ 200

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +P D    +YVW+DAL NYL++
Sbjct: 201 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDDSQTVYVWLDALVNYLSS 260

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +      AK WP    +IGKDIL+FH IYWPAFL++A L  P++++ H      G+
Sbjct: 261 LGYPNE---KFAKHWPPAQQIIGKDILKFHGIYWPAFLMAAGLEPPRQLYVHSHWTVDGQ 317

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  +E  ++ LRYFL+RE     DG Y      + +N++LA+ +GNL
Sbjct: 318 KMSKSKHNVVDPVKAAQEYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSELADTLGNL 377

Query: 362 VSRSVSMILKDYDGMIPTPGAF-------TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           +SR+ +  L                     ++ + +     ++ +  +++ +    H   
Sbjct: 378 LSRACAKSLNPTQIYPALHSEELTELLHNLDAAKRLEESLLQLAERCQQHYECNHFHLVA 437

Query: 415 AQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++ +   + +F++ KPWELK   N  R  T++ +T++V+R   I+LQ  +P+LA ++
Sbjct: 438 DTTMATLHAANNFFESSKPWELKGGINAQRLETIIGMTMDVLRLCGIVLQPIIPQLATQL 497

Query: 474 FDILFVADENRCFQSLDQ 491
            D L +    RC+  L +
Sbjct: 498 LDKLSLPGSQRCWSRLSE 515


>gi|88706623|ref|ZP_01104326.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699119|gb|EAQ96235.1| Methionyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 714

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 131/544 (24%), Positives = 233/544 (42%), Gaps = 50/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + ++ +++A+ Y N   H+GH  E +  D+  RF R  G +  +    D HG  I  +
Sbjct: 26  QAKRRILVTSALPYANGPLHLGHILEQVQTDIWVRFQRSRGHECHYVCADDAHGTAIMLS 85

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  +D   ++    +    IS+D+F  T  +        +++++   G I +
Sbjct: 86  AERQGITAEQQIDAVHKDHLAASRAFAISFDNFYSTHSEETRHWSETIYERLKAAGAINE 145

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW----------- 159
              +  Y      +  D  +             G + +   A ++P +            
Sbjct: 146 REITQAYDPEKGLFLADRFIKGTCPRCKTPDQYGDNCEACGATYSPAELIDPLSALSGAT 205

Query: 160 ---MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E   +FFRL  + D L ++ +S     L     N++  +  SGL++  +SR    +
Sbjct: 206 PVDRESRHFFFRLPLFADMLRTWIDSGT---LQDAVANKLREWTDSGLQEWDISRDAPYF 262

Query: 217 GIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G +IP +     YVW+DA   Y+ +   Y    D +   FW         H +GKDI+ F
Sbjct: 263 GFQIPGETDKYFYVWLDAPIGYMGSFQNYCAQRDIAFDDFWQPGGDTELYHFVGKDIINF 322

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L +A L  P  VF HGF+   G K+SKS G  I+    ++ +  + LRY+  
Sbjct: 323 HGLFWPAMLHAAELRTPTGVFVHGFLTVDGTKMSKSRGTFINAHHYLQHLDAEYLRYYFA 382

Query: 331 REIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+D+   + N+ SR    + K ++       +  E    
Sbjct: 383 AKLSAGVDDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFLRKGFENRTSERCSEPE---- 438

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STV 447
           +L+       EI +  +++   +A+  ++ L    ++Y D  KPW + K     A    V
Sbjct: 439 LLASFGEAGTEIAQAYEDREFSKAIRLIMELADRANQYIDQHKPWVMAKEPGQAADVQLV 498

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHKTFDP 505
               +   R L I LQ  +P +A +    L      RC    DQR  L     L  TF+P
Sbjct: 499 CSTGINCFRLLMIYLQPVLPTMAERAAAYL------RCSLDWDQREALLLNHEL-ATFEP 551

Query: 506 IFPR 509
           +  R
Sbjct: 552 LMQR 555


>gi|294141350|ref|YP_003557328.1| methionyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327819|dbj|BAJ02550.1| methionyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 694

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 232/543 (42%), Gaps = 48/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ ARF ++ G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKMRGHECHYICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q ++  R      +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 64  QQLGIEPEEMIAQVNKEHRQDFTDFNIQFDNFHSTHSVENRELASEIYLKLRDAGYIETR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G +     A +NP   +           
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDMINPKSAVSGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L A++  L  +  S     L  E  N++  + + GLK   +SR    +G
Sbjct: 184 IMKDSEHFFFDLPAFEGMLKEWTRSGA---LQDEVANKLNEWFEQGLKQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSTAEIYHFIGKDIINF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGYRKPTHVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D +
Sbjct: 361 AKLSHRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKV-----ADTT 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +  V     + I E  + +   +A+ ++++L    + Y     PW+L K     + A  V
Sbjct: 416 LEQVFLSKQEVIAELYEGREFGKAMREIMALADLANAYVADAAPWQLIKQEDKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA+ +   L        + +L   L  G  + K F  + 
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLADDVEAFLLFP---ITWDNLSADL-AGHEIAK-FKALM 530

Query: 508 PRF 510
            R 
Sbjct: 531 QRI 533


>gi|163787073|ref|ZP_02181520.1| methionine--tRNA ligase (methionyl-tRNA synthetase)
           [Flavobacteriales bacterium ALC-1]
 gi|159876961|gb|EDP71018.1| methionine--tRNA ligase (methionyl-tRNA synthetase)
           [Flavobacteriales bacterium ALC-1]
          Length = 682

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 136/545 (24%), Positives = 243/545 (44%), Gaps = 43/545 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   + +D+ AR+ RL G DV F  G+DEHG  I   A+
Sbjct: 3   KRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLTGNDVAFICGSDEHGVPITIKAK 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+     +   +   I++D++ RT+ K HHDT +  +K + +K +  +  
Sbjct: 63  KEGVTPQDIVDKYHAIIKKSFEDFGITFDNYSRTSAKIHHDTAQEFFKTLYNKNEFIEEV 122

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------ 160
               Y      +  D            E   G   +     HN    +            
Sbjct: 123 TEQLYDAEANQFLADRFIVGTCPKCGYEESYGDQCENCGTSHNATDLINPKSAITGNVPT 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E + +F  L+ ++D L  +     +         +V S+V  GL+  +++R    WGI
Sbjct: 183 LKETKHWFLPLNKHEDFLREWILKGHKKDWKPNVYGQVKSWVDDGLRPRAVTRD-LGWGI 241

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P +     ++YVW DA   Y++ T      +G   + +  D     +H IGKD + FH
Sbjct: 242 PVPVEGGEGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKDEKTKLVHFIGKDNIVFH 301

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP  V ++ F+  +G+K+S S    +   + + +     D LRY 
Sbjct: 302 CIIFPSMLKAEGSYILPDNVPANEFLNLEGKKLSTSKNWAVWLPDYLIDFPNQQDVLRYA 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R V +  K YDG++P+P  +T  DE
Sbjct: 362 LTANAPESKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYDGVVPSPSNYTAIDE 421

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L+        I  +++      A  ++++L    ++Y   ++PW+  KT+  R  TV+
Sbjct: 422 ETLATVKAYPAVISSSIERYRFREASQELMNLARLGNKYLADEEPWKTIKTDEGRTKTVM 481

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHKTFDP 505
           +V +++   LA+L + F+P  + K+  IL   D    ++ +  +   L     + K  + 
Sbjct: 482 FVALQIASALAVLSEPFLPFTSVKLKGILDSND--NVWEDISTKEILLSASHQIGK-GEL 538

Query: 506 IFPRF 510
           +F + 
Sbjct: 539 LFSKI 543


>gi|77360260|ref|YP_339835.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123589440|sp|Q3IL10|SYM_PSEHT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76875171|emb|CAI86392.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 673

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 138/540 (25%), Positives = 242/540 (44%), Gaps = 46/540 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  V++ S   +      +I +D++  T  + + +   +++ +++D G I +  
Sbjct: 63  KQGITPEEAVEKVSIERQRDFADFNIKFDNYHSTHSQENKELSELIYNRLNDAGHIKRHT 122

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------ 160
            S  +      +  D            E   G +     A ++P   +            
Sbjct: 123 ISQLFDPEKGIFLPDRFVTGTCPTCKSENQNGDNCDSCGATYSPTDLINPRSVMSGAEPI 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E YFF L A++  L  +  S     +  E  N++  +   GL+   +SR    +G 
Sbjct: 183 LKDSEHYFFDLPAFEGMLKEWLHSGT---IQQEMANKLDEWFTDGLQQWDISRDAPYFGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IP+ P    YVW+DA   Y+ +     D        FW AD      H IGKDI+ FH+
Sbjct: 240 EIPNAPGKYFYVWLDAPIGYMASFKNLCDKKGIDFDAFWAADSDAELYHFIGKDIIYFHS 299

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  AN   P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+   +
Sbjct: 300 LFWPAMLEGANFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAAK 359

Query: 333 IACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++ G  D   + +   +RVN+DL   + N+ SR    I K +DG +      T     +L
Sbjct: 360 LSGGIVDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSA----TVMQPQLL 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLY 449
                    I  + +N+   RA+ ++++L  + +++ DA  PW L K  T    A  V  
Sbjct: 416 KEFQAAAPSITAHYENREFSRAIREIMALADKANQFIDAAAPWVLIKDETKQQEAHEVCS 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P++A+ +   L    ++  +  +   L     ++K F P+  R
Sbjct: 476 LGLNLFRVLITYLKPVLPEMADNVEAFLN---DDLAWDGVQNALVS-HPINK-FKPLMQR 530


>gi|86134855|ref|ZP_01053437.1| Methionyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821718|gb|EAQ42865.1| Methionyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 684

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 136/549 (24%), Positives = 251/549 (45%), Gaps = 42/549 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV + +G+DEHG  I 
Sbjct: 1   MSAPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLKGKDVAYISGSDEHGVAIP 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  +D+     +   +   IS+D++ RT+ + HH T    + K+ ++GD 
Sbjct: 61  MRAKKEGVTPQNIIDKYHTIIKKSFEDFGISFDNYSRTSSEIHHKTASDFFIKMYNEGDF 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +   +  Y    + +  D            E   G   +     HN    +        
Sbjct: 121 IEEVTAQLYDAEADQFLADRFVVGTCPKCGFEESYGDQCENCGTSHNATDLISPKSAITG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L  ++D L  +     +         +V S+V  GL+  +++R   
Sbjct: 181 NVPTVKETKHWFLPLDKHEDFLRKWILEGHKKDWKPNVYGQVKSWVDDGLRPRAVTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
           DWGI +P +     ++YVW DA   Y++ T  + +    +   +W  D    +H IGKD 
Sbjct: 240 DWGIPVPVEGAEGKVLYVWFDAPIGYISSTKEWAEREGKNWEDYWKKDDTKLVHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+      +  LP  V ++ F+  +G K+S S    +   E +E+     D 
Sbjct: 300 IVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + + N +L    GN ++R V +  K Y G +PTP  FT
Sbjct: 360 LRYTLTANAPESKDNDFTWKDFQAKNNNELVAIFGNFINRVVVLTNKYYTGAVPTPNDFT 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE +L+        I ++++      A  ++++L    ++Y   ++PW++ K + +R 
Sbjct: 420 EVDEDVLAAVKEFPNVIGKSIERYRFREASQELMNLARLGNKYLADEEPWKVIKVDEERV 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHK 501
            T++YV +++   LA++ + F+P  + K+  IL + + +  +  +  +   +     ++K
Sbjct: 480 KTIMYVALQISAALAVVAEPFLPFTSTKLKGILNL-ETSISWDDISDKNVLIPAEHQINK 538

Query: 502 TFDPIFPRF 510
             + +F + 
Sbjct: 539 -GELLFSKI 546


>gi|317048837|ref|YP_004116485.1| methionyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950454|gb|ADU69929.1| methionyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 677

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 129/541 (23%), Positives = 236/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         DISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFDISYDNYHSTHGEENRQLSELIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP  P    YVW+DA   Y+ +   L +   +    +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGAPGKYFYVWLDAPIGYMGSFKNLCDKRGNIDFDEFWKKDSTTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +
Sbjct: 303 LFWPAMLEGSQYRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   + K + G +        +D ++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFLTKRFGGKLSA----ELADPALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
              +   ++I E   ++  +RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 QTFTDASEKIGEAWASREYNRAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + ++ Q L         F  ++ R
Sbjct: 479 MGINLFRVLMTWLKPVLPSLSARAEAFLQ---SELSWDAIQQPLLDHH--VAPFKALYGR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|260060957|ref|YP_003194037.1| methionyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785089|gb|EAR16258.1| methionyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 691

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 238/539 (44%), Gaps = 42/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I+ A+ Y N   HIGH A   + AD+ +R+ RL G +VLF  G+DEHG  I   A 
Sbjct: 9   ERTTITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLRGEEVLFVCGSDEHGVAIPMKAG 68

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K  +D+     R+  +   I++D++ RT+   H +T    + K+ D+GD  +  
Sbjct: 69  REGISPKELIDKYDALIRESFEAFGIAFDNYSRTSAPIHRETASAFFTKLHDQGDFEEQV 128

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
               +      +  D  V             G   +   +  N    ++           
Sbjct: 129 TDQLFDPEAGQFLADRFVVGTCPKCGHTEAYGDQCENCGSSLNATDLIDPRSAISGAQPV 188

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F  L  Y+  L ++     +         +  S++  GLK  +++R   +WGI
Sbjct: 189 LKQTRHWFLPLDRYEGFLRTWILDGHKNDWKPNVYGQCKSWIDEGLKPRAVTRD-LEWGI 247

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            +P +     ++YVW DA   Y+++T      +G+  + W  D     LH IGKD + FH
Sbjct: 248 PVPLEGAEGKVLYVWFDAPIGYISSTREWARREGADWEIWWKDPGTRLLHFIGKDNIVFH 307

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+K+S S    +   E +EE     D LRY 
Sbjct: 308 CIIFPSMLKAHGDFILPENVPANEFLNLEGQKLSTSKNWAVWLHEYLEEFPDMQDVLRYA 367

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L    GN ++R   +  K   G +P     +E+D 
Sbjct: 368 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVAVLTDKYKGGQVPALQNLSENDR 427

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           + L         I + +          ++++L    ++Y   ++PW++ K +PDR  T+L
Sbjct: 428 NTLHAMRAYPARIADCLDRFRFREGSQELMNLARLGNKYLADEEPWKVIKEDPDRVGTIL 487

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSLDQR---LKPGFMLHKT 502
            V ++V   LA+L + F+P  A ++ +IL +   D    ++++ +    L  G  + +T
Sbjct: 488 GVGLQVAAALAVLCEPFLPFTAGRLREILNLGALDSPLEWEAVSREAVLLPAGHAIGET 546


>gi|254503294|ref|ZP_05115445.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439365|gb|EEE46044.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 508

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 179/509 (35%), Positives = 277/509 (54%), Gaps = 11/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHA+  I+AD+L R     G +++ +TG DEHGQK  +AA+  
Sbjct: 4   KSYITTPIYYVNGSPHIGHAFTSIMADILKRNREALGYEMMLSTGVDEHGQKNQEAAEAL 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +    ++D   + FRD+ + + + +D F+RT+ + H      + ++I DKG I K  Y+
Sbjct: 64  DMPVTDYLDMRCKEFRDVFEKIGVEFDYFVRTSREGHKTAVAEMEQRIFDKGLIVKKQYT 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + ++    DGQ        V+  +E  YF ++  +++KLL + + +P+
Sbjct: 124 GTYCKGCEEFKKESDLT--EDGQCPLHPTIKVEQTDETNYFLKMEPFREKLLKHIDENPD 181

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           FI P   +NE+   +   L+DL +SR       G+ +P DP ++ YVW DAL NYLT  G
Sbjct: 182 FIQPEPFKNELKKMLAEPLEDLCISRPKTRVTLGVDLPFDPDFVTYVWFDALANYLTNIG 241

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           + D+       +W    H+IGKDIL+ H +YWP  L++A+LPLPKK+  H   +   G K
Sbjct: 242 WPDDGYQD---WWAECEHMIGKDILKPHGVYWPLMLMAADLPLPKKLSVHSHWVGAGGVK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DPIEV++++GVDALR++L R +    D     D + +  N++L N IGNL+
Sbjct: 299 MSKSIGNVVDPIEVMDKLGVDALRWYLARHMRADSDSQISVDLITQAYNSELGNKIGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR      K++DG +P PGA T  DE++        +     +  Q I  A  Q++    
Sbjct: 359 SRVAKFSNKNFDGKVPMPGALTAEDEALRRTVVEATKAFAGWINLQDIPAATQQIVEAAV 418

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++ Y D Q PW L K     +R +TVLYVT++  R L   L   +P  A +   +L   
Sbjct: 419 AMNEYIDQQAPWSLFKNEETRERCATVLYVTLDCQRILFEALTQVIPGSATRALGMLNAP 478

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                +     +L  G  L +  D +FPR
Sbjct: 479 KAATPWAPELDKLAGGTELGE-IDALFPR 506


>gi|148642131|ref|YP_001272644.1| methionyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222444690|ref|ZP_03607205.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350771|ref|ZP_05976188.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|187647750|sp|A5UJ98|SYM_METS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148551148|gb|ABQ86276.1| methionyl-tRNA synthetase, MetG [Methanobrevibacter smithii ATCC
           35061]
 gi|222434255|gb|EEE41420.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860526|gb|EFC92824.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 660

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/534 (26%), Positives = 252/534 (47%), Gaps = 34/534 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K++IS A+ Y N   H+GH     + AD+ AR++R+   DVL    TDEHG  IA  A  
Sbjct: 3   KIFISCALPYANGPCHLGHIRSTYLPADIYARYNRMIDNDVLLVCATDEHGTPIAVKADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                     +         + ++IS D+F RTT+  H++  +  + ++ +KG IYK   
Sbjct: 63  ENKKPIEIAKRYHDMIVRDVESMNISLDNFTRTTDDLHYEIAQNFFLELYNKGLIYKKDI 122

Query: 125 SGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG---------- 164
              Y  +   +  D  V           +G   +       P +  E +           
Sbjct: 123 QQLYCEKCNKFLPDRYVEGICPVCGSEARGDHCEKCGRALEPTELDEPKCLTCGSTPVIK 182

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LS ++D L  Y +++    LP   RN   +++K GL D  L+R   DWGI +
Sbjct: 183 DTYQYFFKLSEFEDDLKDYIDNNEN--LPANVRNYAKNWLKEGLNDWVLTRD-MDWGIPL 239

Query: 221 PDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWP 276
           P D     ++YVW++A   Y+++        G K + +  D  +H IGKDI+  H+I+WP
Sbjct: 240 PLDEAKGKVLYVWVEAFLGYISSAAQWSRETGIKWEDYWNDTAIHFIGKDIIYHHSIFWP 299

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             L +    LP  +++  F+  +GEK+S S   V+   + +++   D LRY+L       
Sbjct: 300 GLLKAYGCKLPDNIYAGEFLSLEGEKMSTSKNWVVWIADFVDKFDPDLLRYYLTINAPLN 359

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  +  D  ++R N +LA+ IGN + R+ +   K +DG IP     +  D     +  +
Sbjct: 360 KDTDFSWDDFQRRNNDELADVIGNFLHRTFTFTHKFFDGEIPEYKNPSAEDNKFKEIIEK 419

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   + E + +      L ++  +    ++YF+ Q+PW+  K +  +A+  LY++ ++ +
Sbjct: 420 LPDTVGEYISDFEFRDGLLEIYRVAKIGNKYFNDQEPWKAVKEDMQKAANCLYLSNQLAK 479

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            LA +L+ ++P  A+ I  I+ +   +  ++     L  G  ++K   P+F + 
Sbjct: 480 TLAYVLKPYIPNKADAIAKIINLTTPDE-WKDAKVPLAEGHKINKA-KPLFTKI 531


>gi|218883858|ref|YP_002428240.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765474|gb|ACL10873.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 498

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 180/477 (37%), Positives = 259/477 (54%), Gaps = 13/477 (2%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           +T I YPNA PHIGHAY  + ADVLARFHRL G  V F TG DEHG KI + A+ AG   
Sbjct: 2   TTPIYYPNAPPHIGHAYTTVFADVLARFHRLTGGKVFFLTGNDEHGLKIQRVAEKAGKHP 61

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           K +VD+ +  +R+   +L+ISYD FIRTT+  H    +  +  I  KG IYK  YSG Y 
Sbjct: 62  KEYVDEMANLYREYWRILNISYDYFIRTTDPYHEKAVKEAFNYIYGKGLIYKAKYSGMYC 121

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           +  E YY+  E  +     Y    + P++++EEE Y+F+LS ++D LL   E+       
Sbjct: 122 VDCEKYYSPGEYTEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLDVLENQDIVYPS 181

Query: 190 IERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
              R         GL+D+S++R      WGI +P D +Y++YVW DAL NYL+  GY  +
Sbjct: 182 QYAREVASKIRNEGLRDVSVARPVERVWWGIPVPFDDKYVIYVWFDALMNYLSGIGY-PD 240

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                  +W    H+IGKDIL FH   W + L + ++P P++V  H +++ KG KISKS+
Sbjct: 241 DKEKNTLYWSNVHHIIGKDILWFHTAVWFSMLKALDMPPPRRVIVHSYLISKGLKISKSI 300

Query: 308 GNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           GNVI   E++E   G D +RY L R     KD     + L    N +LA+  GNLV R  
Sbjct: 301 GNVISIEELVERYNGSDGVRYLLSRIFNTDKDSEVSFELLDSIYNTELADTFGNLVRRVG 360

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S+ LK   G +         DE++  V S  +    + M++  + +AL  V+++    ++
Sbjct: 361 SLALKKMGGKVYKRS----IDENVADVISSGIGAYLDAMRSYEVSKALEHVMNIARYANQ 416

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           Y +  KPWE  K+NP +    LY  +E+I+   ILL  F P  ++K+        EN
Sbjct: 417 YINETKPWE--KSNPSKE---LYTLLELIKVATILLHPFTPMASSKLASAFGFEIEN 468


>gi|212537687|ref|XP_002148999.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210068741|gb|EEA22832.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 583

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 180/493 (36%), Positives = 264/493 (53%), Gaps = 15/493 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKAA 62
           ++  Y++T I Y NA PH+GH Y M++ DV+ R+ +L G  + +F TGTDEHG KI +AA
Sbjct: 54  KKPFYVTTPIFYVNAAPHVGHLYSMVLGDVIKRWQQLKGNTNAIFLTGTDEHGIKIQQAA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG+ T+ F D N + F+D+A    IS D FIRTT++ H D  R  W+ +  +G IY  
Sbjct: 114 QEAGMDTQSFCDMNCKTFKDLARAAKISNDHFIRTTDEAHKDAVRYFWESLQHRGYIYTK 173

Query: 123 CYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DEA+Y   +V        G            V+W  E  Y FRLSA++D+L
Sbjct: 174 KHEGWYSVSDEAFYPQSQVEPSLDPATGRKRMISTETGKEVEWSSEINYHFRLSAFKDRL 233

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L +YE +P+FIL       +   V++ L+DLS+SR      WG+++P D    +YVW+DA
Sbjct: 234 LEFYEQNPKFILAKNHMRHLKKTVEADLQDLSISRPVERLTWGVRVPGDDSQTIYVWLDA 293

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY   P       WPADLH++GKDI+RFH IYWPAFL++ +LPLP+ V  HG
Sbjct: 294 LINYLTKAGYPFTPGKESDLGWPADLHIVGKDIVRFHCIYWPAFLMALDLPLPRHVLVHG 353

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                  K+SKS GNV++P   I+   VD +R+FL        D  Y+ + +       L
Sbjct: 354 HWTMNKAKMSKSTGNVVNPFFAIDRFSVDVMRFFLTLRGPLIDDSNYENNNIVNDYKKYL 413

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQL 409
             G+GN+  R + +        I            E+D         +   +   M+   
Sbjct: 414 QYGVGNVYQRLMGVARLKLRPSIDAAKSGFSTEANENDMEFEKYLQELPAIVDRFMEAFN 473

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              AL +++    +   YF    PWE  K +  R + VLY   E +R   ILLQ F+P+ 
Sbjct: 474 SKAALRELVDGAMKAQNYFHRSAPWE-HKDDLTRCARVLYNVSEFLRISGILLQPFMPQK 532

Query: 470 ANKIFDILFVADE 482
           ++++ D + V+ +
Sbjct: 533 SSELLDRIGVSRD 545


>gi|313675114|ref|YP_004053110.1| methionyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941812|gb|ADR21002.1| methionyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 688

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 131/546 (23%), Positives = 236/546 (43%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I+ A+ Y N   HIGH A   + AD+  R+ RL   +V F  G+DEHG  I   A+ 
Sbjct: 7   RYTITAALPYANGPLHIGHIAGAYLPADIFVRYLRLRKKEVAFMCGSDEHGAAITIRAKK 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T    +D+     +   +   I++D + RT+E  HH+  +  + K+ +KG+  +   
Sbjct: 67  EGITPNAIIDKYHELNKKTFEKFGIAFDMYHRTSEPSHHELSQEFFTKLYEKGEFEERES 126

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   +  NP   +             
Sbjct: 127 EQYYDEEFNQFLADRYITGKCPKCGNESAYGDQCEKCGSSLNPTDLINPVSTLSGKTPIL 186

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI- 218
                +F  L  YQ+ +  +     +         +  S++  GL+  +++R   DWG+ 
Sbjct: 187 KKTTHWFLPLDKYQEWMEKWLVEGKKGKWKSNVYGQCSSWLNQGLQARAMTRD-LDWGVD 245

Query: 219 -KIPDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW-----PAD----LHVIGKDI 267
             +       +YVW+DA   Y++ T  +  +      KFW     P D    +H IGKD 
Sbjct: 246 VPLKGAEGKKLYVWLDAPIGYISATKQWAKDTGNDWEKFWKKQENPEDDSTLIHFIGKDN 305

Query: 268 LRFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA-- 324
           + FH I +P       +  LP+ V ++ F+  +G K+S S    +   E +E        
Sbjct: 306 IVFHCIIFPVILHAHGDYILPENVPANEFLNLEGHKLSTSRNWAVWLHEYLESFPGKEDV 365

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L   +   KD  +     + R N++L    GN ++R+V +  K YDG +P  G + 
Sbjct: 366 LRYALAATLPETKDSEFTWKDFQTRNNSELVAIFGNFINRAVVLTHKYYDGKVPERGEWF 425

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D+ IL+        I E + N     ALA ++      ++Y    +PW+L+K NP+R 
Sbjct: 426 DYDQEILNELKGYPDLIEEKIVNYKFREALAAMMEFARLGNKYLAETEPWKLQKENPERV 485

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
            T++ + +++   L+I+ + F+P  A K+  +L +             L+ G  ++K  +
Sbjct: 486 KTIMNLALQIAANLSIVCEPFLPFTATKLRKMLNIEAYEWDLAGSADLLEAGHQINKA-E 544

Query: 505 PIFPRF 510
            +F + 
Sbjct: 545 LLFEKI 550


>gi|157103464|ref|XP_001647993.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108880524|gb|EAT44749.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 553

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 178/518 (34%), Positives = 275/518 (53%), Gaps = 18/518 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARF----HRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++T I Y NA PHIGH Y  +I D + RF    H       +F+TGTDEHG KI +AA +
Sbjct: 20  VTTPIFYVNAAPHIGHLYSAVITDAIHRFNNLVHPTAQASSIFSTGTDEHGTKIQQAAAS 79

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V    +  Q S  +R +    +IS+  +IRTT+  H +  +  W  +   G IY   Y
Sbjct: 80  HSVPVDTYCQQISDRYRSLFRNFNISHTRYIRTTDPDHTEAVQCFWNALECSGSIYSAQY 139

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWY + DE +  ++++ +   G   +A+  +PV+W EE+ + FRL  YQD +L + +  
Sbjct: 140 SGWYCIPDETFLTENQLKENNLGVKVSAESGHPVEWTEEKNFMFRLEKYQDDVLYWIKGC 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            + I+PI+ R  ++ F++  L D+S+SR      WGI +P DP   +YVW+DAL NYLT 
Sbjct: 200 EDRIVPIKFRKILLDFLQEKLPDISISRPKSRVSWGIDVPSDPTQTVYVWLDALVNYLTV 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +GY           WP  + V+GKDIL+FH IYWPAFL++A L  P+K+  H      GE
Sbjct: 260 SGYPQEG---FVHRWPPTVQVLGKDILKFHGIYWPAFLIAAGLEPPRKLLVHSHWTVDGE 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP E       + +RYFL+RE     DG Y    + + +NA+LA+  GNL
Sbjct: 317 KMSKSKGNVVDPNERASLYTHEGIRYFLLREGVAHSDGNYSDTKIMRILNAELADTFGNL 376

Query: 362 VSRSVSMILKDYD----GMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALA 415
           +SR    +L                 ++ D  + +L + + +  +   + +    +  + 
Sbjct: 377 LSRCCGKVLNPEAVVPVVQQDEFNTLSQMDVTKKMLELLNELPDKCMTHYRQYNFYLVVD 436

Query: 416 QVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            VI ++   + +F++  PW+LKK     +   +L VT+EV+RQ  I+LQ  VP ++ K+ 
Sbjct: 437 SVIQVLHATNNFFESTAPWKLKKPEEKQQLQAILGVTMEVLRQAGIILQPIVPIMSGKLL 496

Query: 475 DILFVADENRCFQSLDQRLKP-GFMLHKTFDPIFPRFL 511
           D L V    R +  L  +L      L  T   +F R +
Sbjct: 497 DKLSVERNRRLWTDLTLQLAEVERPLADTDAVLFRRII 534


>gi|167957600|ref|ZP_02544674.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 493

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 190/513 (37%), Positives = 286/513 (55%), Gaps = 42/513 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KLYI+TAI Y N++PHIG+A + ++AD+ AR+HR  G +V F  GTDEHG KI+  AQ 
Sbjct: 3   KKLYITTAIPYANSKPHIGNALDYLLADIWARYHRQLGKEVRFQAGTDEHGNKISAKAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    +V+Q    F+++ + +   Y DFIRTT+  H    + +WKK+S    IYKG Y
Sbjct: 63  EGLDPITYVNQTHLYFKEIMNKIGAQYTDFIRTTDSHHIQAVQYIWKKLSP--YIYKGTY 120

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWYS+ +E++ +D  V    +G   +    P + + EE Y+FRL+ +  ++ +  E++ 
Sbjct: 121 EGWYSVGEESFVSDK-VAAANNGISPDHGV-PYERLSEENYYFRLTHFVPQIRNAIENNE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             I P  R+ EV++ +  G++DLS+SR      WG+ +P D   ++YVWIDAL+NY+T  
Sbjct: 179 IKIFPESRKKEVLNLLNDGIEDLSVSRPRKNLAWGVSVPGDDNQVIYVWIDALSNYITVL 238

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY D+       +WPA++ V+GKDILRFHAI WPA L++  LPLPK++  HG I   G+K
Sbjct: 239 GYPDDESWRD--YWPANVQVVGKDILRFHAIIWPAILMALGLPLPKQILVHGHIGFDGKK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+ P EVI+  G DA RY+  R I    DG +  +  +K  N +L N +GNLV
Sbjct: 297 MSKSLGNVVSPNEVIDTYGADAFRYYFSRHIPTLDDGDFTWEKFEKAYNNELGNDLGNLV 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R   M+L+   G++             L+     +Q  R+ M       A+ QV   + 
Sbjct: 357 QRVAKMVLRYQAGVVGE-----------LNRGEHDIQLYRDAMDEMRFSDAIDQVWGKIR 405

Query: 423 EVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++Y +  KPWE+ K   D       S +L   V  I Q+A LL  F+P+ ++KI   +
Sbjct: 406 ATNQYLEQVKPWEVAKNKDDPESTEHLSDILQDAVGSIMQIADLLVPFLPEASSKI-KAI 464

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           F                    +  + DPIFP+ 
Sbjct: 465 FAEG-----------------VVSSSDPIFPKI 480


>gi|255036715|ref|YP_003087336.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949471|gb|ACT94171.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 691

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 142/555 (25%), Positives = 248/555 (44%), Gaps = 49/555 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +   ++  ++ A+ Y N   HIGH A   + AD+  R+ R  G DV F +GTDEHG  I 
Sbjct: 3   ISNPKRYTVTAALIYANGPIHIGHLAGCYVPADIYVRYLRSSGKDVAFISGTDEHGVPIT 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+           L IS+D + RT++  HH+T R +++ + DK   
Sbjct: 63  IRAKKEGLTPQQVVDKYYEQIDASFKALGISFDIYSRTSKPVHHETSREIFRDLYDKKVF 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------ 162
            +     +Y    + +  D  +             G   +   +  +P++  +       
Sbjct: 123 IEETTEQYYDETAQQFLADRYIVGTCPVCANPNAYGDQCERCGSTLSPLELKDPRSTLSG 182

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + ++  L   Q  + +Y   H E+        +  S++K GLK  +++R   
Sbjct: 183 AKPVLKATKNWYLPLDKMQPDIEAYVNGHSEWK--TNVFGQCQSWLKDGLKPRAMTRD-L 239

Query: 215 DWGI--KIPDDPQYIMYVWIDALTNY-----LTTTGYLDNPDGSKAKFWPAD-------- 259
           DWGI   + D    ++YVW +A   Y               +G K  + PA         
Sbjct: 240 DWGIKVPVEDTEGKVLYVWFEAPIGYISATKDWLIQKNGTDEGWKKWWQPAADASEGETK 299

Query: 260 -LHVIGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            +H IGKD + FH I +PA L+   N  L   V ++ F+  +G+KIS S    +   E +
Sbjct: 300 LVHFIGKDNIVFHCIIFPAMLMAEGNYILADNVPANEFMNLEGDKISTSRNWAVWLHEYL 359

Query: 318 EEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           EE+    D LRY L       KD  +     + R N++L    GN ++R+V +  K  +G
Sbjct: 360 EELPDKQDVLRYVLTANAPETKDSEFTWKDFQTRNNSELVGIYGNFINRAVVLTQKFCEG 419

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P  GA  E D++ L   +   Q+I + M+N     AL  ++ L    ++Y    +PW 
Sbjct: 420 KVPQRGALQEIDQAALKDLAAFPQKIADAMENYRFREALTLIMDLARTGNKYLADTQPWH 479

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + KT+P+R +T+L + +++   L+I+ +  +P  A KI + L ++ +N         L P
Sbjct: 480 VIKTDPERVNTILNIALQISATLSIVSEPVLPFTAAKIQEQLGLSGKNWQDAGHADLLTP 539

Query: 496 GFMLHKTFDPIFPRF 510
           G  + +    +F + 
Sbjct: 540 GQPVLE-GKLLFEKI 553


>gi|170720312|ref|YP_001748000.1| methionyl-tRNA synthetase [Pseudomonas putida W619]
 gi|226710914|sp|B1J1D1|SYM_PSEPW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169758315|gb|ACA71631.1| methionyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 681

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 132/545 (24%), Positives = 227/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSSLIYSRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNKDSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A L  P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGLRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  DG++    A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVAGDAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPGIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F P
Sbjct: 474 AICAQGINLFRQLMIFLKPVLPVLAADAEAFLNVAP--LTWSDHLSRLE-NHKLN-PFKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|329898088|ref|ZP_08272297.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328920960|gb|EGG28385.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 683

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 123/540 (22%), Positives = 224/540 (41%), Gaps = 38/540 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  ++ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I   
Sbjct: 4   QQPRRILVTSALPYANGPLHLGHMLEQIQTDIWVRFQQSQGNECYYICADDAHGTAIMLK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  ++Q        +    +++D F  T    +      ++  + D G I K
Sbjct: 64  AQALGITPEQLIEQVREQHERDSRGFLVNFDHFYSTHSDENRYWSERIYGALRDSGQIVK 123

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                 +      +  D  +             G + +   A + P   ++         
Sbjct: 124 RNIVQAFDPEKGLFLADRFIKGTCPKCKTSDQYGDNCESCGATYTPNDLIDPVSALSGAK 183

Query: 171 AYQDKLLSYY-----------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             Q +   Y+           +      L  +  N++  ++ +GL+   +SR    +G +
Sbjct: 184 PVQKESEHYFLDLAQSSELLTDWINSGRLQSQVANKLREWLDAGLQGWDISRDAPYFGFE 243

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +       +    + +  D       H IGKDI+ FH +
Sbjct: 244 IPDAPGKYFYVWLDAPIGYIASFDNFSKQNNLDFESFWFDGKATELYHFIGKDIINFHGL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE- 332
           +WPA L +A L  P  +++HGF+   G K+SKS G  I+    +  +  + LRY+   + 
Sbjct: 304 FWPAMLNAAGLRAPSAIYAHGFLTVNGTKMSKSRGTFINASNYLSHLAPEYLRYYFAAKL 363

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   +RVN+D+   I N+ SR    + K +D  +       E    +LS
Sbjct: 364 GPSVDDIDLNLEDFVQRVNSDVVGKIVNIASRCAGFLKKRFDNTLAAEQEAPE----LLS 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYV 450
                 + I  + + +  +RA+ +VI+L  +V+++ D ++PW L K   + A    V   
Sbjct: 420 DLLDARRSIAAHFEGRDYNRAIREVIALADKVNQFIDEKQPWVLAKDEANNAQVHRVCSD 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V+  R L   L   +P++A K  + L        F +L+  L P     + F P+  R 
Sbjct: 480 GVQAFRILVSYLAPVLPEMATKSENFLNT---QLTFSNLESGLLPAGHQLEPFSPLMQRI 536


>gi|303314943|ref|XP_003067480.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240107148|gb|EER25335.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 568

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 188/532 (35%), Positives = 277/532 (52%), Gaps = 36/532 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +R+  Y++T I Y NA PH+GH Y +++AD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 47  QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G+      DQN + F+D+A   ++ +D FIRTT+  H D  +  W+ +  +G IY 
Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166

Query: 122 GCYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y  + V+       G            V+W  E  Y FRLSA++D+
Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDR 226

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P FI P    + ++  V SGL DLS+SR      WGI++P D    +YVW+D
Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY   P       WPA++HV+GKDILRFH +YWPAFL++ +LPLP++V SH
Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALDLPLPRQVLSH 346

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS GNV++P+  +   GVD LR++L  +     D  Y+   + +R    
Sbjct: 347 AHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKT 406

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQ 408
           L  G+GNL SR V     +    I           +E+D     +   +    R  M + 
Sbjct: 407 LQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPPSEADRKHQQLLEGIRDVTRSWMDDL 466

Query: 409 LIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +A   V+ ++ E  +             T P   S V+Y T E +R   ILLQ F+P
Sbjct: 467 NPRKAAESVVGIIHESGN-------------TEPTELSRVIYNTAESLRIAGILLQPFMP 513

Query: 468 KLANKIFDILFVA--DENRCFQSL-----DQRLKPGFMLHKTFDP-IFPRFL 511
           + + ++ D+L VA   E R F++      +    P   L K  +  +FP  +
Sbjct: 514 EKSARLLDMLGVAGDPEKRSFEAAIFGADEHYGVPLVELKKGTEATLFPPLV 565


>gi|299116975|emb|CBN75079.1| Methionine--tRNA ligase [Ectocarpus siliculosus]
          Length = 837

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 183/512 (35%), Positives = 275/512 (53%), Gaps = 16/512 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE+ Y++TAI Y N +PHIGHAYE I +DVL+R+ R+ G  V+F TG+DEHGQKIA  A
Sbjct: 119 KRERFYLTTAINYTNGEPHIGHAYEAIASDVLSRYQRMSGKRVIFQTGSDEHGQKIANTA 178

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+      D+ +  F+++   L IS D ++RTT   H +T + LW+  +D GDI+ G
Sbjct: 179 AKLGLQPIDICDKYAGKFQELNKRLLISNDLYMRTTSALHKETSQRLWQICADAGDIFLG 238

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY  R+E Y  D +         +    +P++ M E  YFF++  Y + L+ Y   
Sbjct: 239 KYEGWYDEREEKYVTDSDAELADFKDAFG---SPLKRMSEASYFFKMGKYIEWLIQYITD 295

Query: 183 HPEFILPI-ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNYL 239
           +P FI P   R N +         DLS+SR TF  GI +P   D  ++MYVW DALTNYL
Sbjct: 296 NPSFIQPETHRLNILTRLQNGHQNDLSVSRTTFKHGIPVPVGFDQAHVMYVWFDALTNYL 355

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH-GFILH 298
           +    LD+ +   A FWPA +HVIGKDI  FH + WP  L SA LPLPK V++H      
Sbjct: 356 SGIHALDSDNPMSA-FWPASVHVIGKDITWFHCVIWPCILKSAGLPLPKTVYAHGFVAAA 414

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGNVIDP ++ ++  VD  R+++ RE   G D  + K  L    N++L N  
Sbjct: 415 DGRKMSKSLGNVIDPHDICDQYAVDTFRWYICREAIFGCDLSFSKRALVLAHNSELCNTF 474

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV RS+S++ K  +G +P      +         +   +++   + N  +  A A  +
Sbjct: 475 GNLVHRSLSLMHKYNNGNVPERQVGFDF---FPFDFAATRRDVDAAITNYALQDACAVAM 531

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + E +++    +PW ++K + DR      + V +E +  +A LL AF+P    ++F+ 
Sbjct: 532 EALRETNKFLQESEPW-MRKGDEDRPYRLECVRVCLEAVYCVAHLLVAFLPTACTRVFEK 590

Query: 477 LFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIF 507
           L +        +     +  G  +      +F
Sbjct: 591 LGLPPVPIASLKPDFSNIPAGTKVT-VGSILF 621


>gi|260817050|ref|XP_002603400.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
 gi|229288719|gb|EEN59411.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
          Length = 531

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 195/524 (37%), Positives = 284/524 (54%), Gaps = 36/524 (6%)

Query: 19  QPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS 77
            PH+GH Y  ++AD + R+ +L G    +F+TGTDEHG KI +AA   G   + F D  S
Sbjct: 8   VPHLGHLYSAVLADTIHRWQQLKGAGGSVFSTGTDEHGLKIQQAALAHGKDPQQFCDDVS 67

Query: 78  RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN 137
           R+FRD+     + + DFIRTTE RH       W+K+   G IY+G Y GWYS  DEA+  
Sbjct: 68  RHFRDLFSKSHVGHTDFIRTTESRHRKAVEHFWRKLQSAGYIYQGKYEGWYSTSDEAFVP 127

Query: 138 DDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D++V        G D +      + V+WM+EE Y FRLS +  +LL + +S+P  + P +
Sbjct: 128 DNKVMESVDKATGKDIKVSIETGSQVEWMKEENYMFRLSEFGPRLLEWLDSNPRAVYPDK 187

Query: 192 RRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
            R  V  ++  GL+DLS+SR+     WGI +PDDP   +YVW+DAL NYLT  GY DN  
Sbjct: 188 YRTLVRGWLGEGLEDLSVSRQRDRLPWGIPVPDDPTQTIYVWLDALVNYLTVCGYPDNHH 247

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
                 WPAD HV+GKDI+RFHA+YWPAFL++A L  P+ V +H   L + +K+SKS GN
Sbjct: 248 A----HWPADCHVVGKDIVRFHAVYWPAFLMAAGLDPPRSVVTHSHWLMESQKMSKSKGN 303

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+DP + I+    D LRYFL++      DG Y  + + K +NADLA  IG L++R ++  
Sbjct: 304 VVDPFDRIQRYSADGLRYFLLKHGVLEADGDYSDEKVVKVLNADLAGNIGGLLNRCLATS 363

Query: 370 LKDY--------DGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           L           +     PG       TE D  +L     +   + ++ +N  I++ L +
Sbjct: 364 LNPTQTFPAFSANMFPVHPGTNSNTLATEEDYKLLKTLQELPGSVDQHYKNFHIYKVLEE 423

Query: 417 VISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  V + + +    KPW+L  T  + + AST+L+V +E +R   ILLQ  +P L + + 
Sbjct: 424 TMLCVKQANGFVHRHKPWKLGNTPQDQEWASTILHVAMETLRVSGILLQPVMPDLMSGLL 483

Query: 475 DILFVADENRCFQSLD------QRLKP--GFMLHKTFDPIFPRF 510
             L V +  R +   +       R  P  G  L      +F R 
Sbjct: 484 SRLGVEETERSWSDAEDVPCVKGREAPYVGRTLGTNRGVLFQRL 527


>gi|118089314|ref|XP_426247.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 572

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 172/512 (33%), Positives = 262/512 (51%), Gaps = 31/512 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKAAQ 63
            +L +ST I Y N  PHIGH Y  ++AD L R   L G      +TGTDEHG KI +AA 
Sbjct: 23  RRLLLSTPIFYANGPPHIGHVYSALLADALHRHRGLRGAGPSRLSTGTDEHGLKIQQAAA 82

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG +      + S  F        +S+ DFIRT+E RH       W  + ++G +YKG 
Sbjct: 83  AAGTSPPELCARISALFHQAFTQAAVSFTDFIRTSEPRHCQAVCHFWTALQERGALYKGT 142

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLS 178
           Y GWY   +E +  + ++ +  D Q    +      + V W +EE Y F+LSA+QD L  
Sbjct: 143 YEGWYCTAEEGFLPESQLTERVDAQGCTHKVSVESGHEVHWTKEENYMFKLSAFQDPLQK 202

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
           +   +P  I P      V+ ++   L DLS+SR+     WGI +P D    +YVW+DAL 
Sbjct: 203 WLRDNPRAICPEPFYQRVLCWLGEDLPDLSISRERSRLQWGIPVPSDSTQTIYVWVDALV 262

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYL+  GY +       ++WPA  HV+GKDIL+FHA+YWPA L++A L  P+++F H   
Sbjct: 263 NYLSVLGYPETH----GEWWPAAHHVVGKDILKFHAVYWPALLMAAGLSPPERIFVHSHW 318

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K+SKSLGNVIDP    E   VD  RYFL+R+    +D  Y  + + K VN++L +
Sbjct: 319 TVRGQKMSKSLGNVIDPFACNERYTVDGFRYFLLRQGVPERDCDYYDEKVVKVVNSELVD 378

Query: 357 GIGNLVSRSVSMILKDYDGMIP----------------TPGAFTESDESILSVCSRVLQE 400
            +G L++RS +  +   +                      G     D   +   + +   
Sbjct: 379 ALGGLLNRSTAPGINPSNTYPCFSETCFPKVVDYRETEALGRAAAEDYEFVVSVASLPLR 438

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQ 457
           +    ++  I++AL  +   V + + +F   +PW+L + +P       T+++VT+E +R 
Sbjct: 439 VASYFEDFQIYKALECIALCVRQTNGFFQRHRPWKLDRKDPSEKLWLDTIIHVTLECLRV 498

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ  +P  A+K+   L V  E R   +L
Sbjct: 499 YGTLLQPVIPHTADKLLSRLAVEPEERLISNL 530


>gi|124485549|ref|YP_001030165.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|187647745|sp|A2SRE2|SYM_METLZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|124363090|gb|ABN06898.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 673

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 125/540 (23%), Positives = 236/540 (43%), Gaps = 40/540 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +  + ++  + Y N   H+GH    I  D   R+ R  G D++F  G+D HG  I  
Sbjct: 1   MTNKPTV-VTCGLPYTNGFCHLGHLRTYIPGDFYVRYLRRLGDDIVFICGSDNHGTPIVV 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T +   +    +F ++   + I++D F  T +  +H     + + + D+G +Y
Sbjct: 60  TAEAEKTTPRAVSETYHAHFDNVFKSMGIAFDRFGMTDDPTNHHRTVSILQTLIDRGYVY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHN 155
           +      Y  + + +  D  V                                       
Sbjct: 120 EQTIQQSYCPKCKRFLPDRYVEGTCPYCGKHARGDECDSGCGRHLEPGEILDPVCATCGT 179

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  E++ Y+F+LS+++D LL Y    P     +  +N  I +V++ LKD  ++R   D
Sbjct: 180 KAELREQKHYYFKLSSFRDYLLEYL---PTLGGTLNAKNYAIGWVENELKDWCITRM-MD 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHA 272
           WG+K P     + YVW+DA   Y++ T        +  + +  +   +H IG DI+  H 
Sbjct: 236 WGVKFPGSDDLVCYVWVDAPIGYISFTEEWAKATNNSWQKYWCEGDRVHFIGSDIIYHHC 295

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLV 330
           ++WPA L  A    P  V + G +   GEK SKS GNV+   E  + + +  D LRY+L+
Sbjct: 296 VFWPAMLHGAGYQPPTAVVASGMVTIDGEKFSKSKGNVVWTKEDYLDKGLPADYLRYYLL 355

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              +  ++  +     + R+N +L N  GN  +RS+S++   +  +   P      +  I
Sbjct: 356 AYTSHTRELDFSWKEFQARINNELVNTFGNFANRSMSLVKTKFGDVPQVP-----VEAEI 410

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +   R L  I E+++      A+  ++ L +  + Y     PW+L K +P  A+ +L  
Sbjct: 411 FAEIERSLAAIEESVRAYEFKAAVDGILLLAAYGNSYISNAAPWKLIKEDPQAAAQILKN 470

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +++++  A+++Q  +P+ + K++++L   D+       D  +           P+F R 
Sbjct: 471 CLQIVKACALIMQPVMPESSQKLWEMLGYTDKIESRPISDALVPFENTTLGDVKPLFARI 530


>gi|298373027|ref|ZP_06983017.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275931|gb|EFI17482.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 684

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 137/533 (25%), Positives = 234/533 (43%), Gaps = 41/533 (7%)

Query: 9   ISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           I+TA+ Y N   HIGH A   + AD+ AR+ R  G +V+F  G+DEHG  I   A+  GV
Sbjct: 8   ITTALPYANGPVHIGHLAGVYVPADIYARYLRNKGEEVVFIGGSDEHGVPITIKARKEGV 67

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +  VD+     +   +   IS+D + RTT K H+      +KK+ DKG+  +     +
Sbjct: 68  TPQDIVDRYHEIIKRSFEEFGISFDVYSRTTSKTHYRVASYFFKKLYDKGEFIEQTSEQY 127

Query: 128 YSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE-------------- 162
           Y      +  D  +             G   +      +P   +                
Sbjct: 128 YDEEAGQFLADRYITGKCPHCGNERAYGDQCESCGTSLSPTDLINPQSAISGSKPVMRQT 187

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
             ++  L  ++   L  Y  +           +  S++  GL+  ++SR   DWG+ +P 
Sbjct: 188 RHWYLPLDKHEAW-LRDYILNNHKEWKTNVYGQCKSWLDVGLQPRAVSRD-LDWGVPVPL 245

Query: 222 -DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHVIGKDILRFHA 272
            D    ++YVW DA   Y++ T  L +    K    + W  D     +H IGKD + FH 
Sbjct: 246 PDAEGKVLYVWFDAPIGYISNTIELCSEKPEKFGNWERWWKDPETRLVHFIGKDNIVFHC 305

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFL 329
           I +PA      +  LP  V ++ F+  +G+KIS S    +   E + ++    D LRY L
Sbjct: 306 IVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLVDMPDKQDVLRYVL 365

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  KD  +     + R N++L +  GN ++R++ +  K +DG +P  G   + D  
Sbjct: 366 TANAPETKDNDFTWRDFQVRNNSELVSIYGNFINRTLVLTGKYFDGKVPPRGTLEDIDSD 425

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +L+  +    +I + + N     AL + ++L    ++Y    +PW+L KT+ +R +T+L 
Sbjct: 426 VLAQIADSKAKIEQLLDNFHFRDALREAMNLARTGNKYLADTEPWKLAKTDMNRVATILN 485

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           V +++   L I  + F+P  + K+  +L             + L  G  L KT
Sbjct: 486 VALQLSANLNIAFEPFLPFSSAKLRQMLQFDSVRWADFGKTELLPAGHALGKT 538


>gi|300722469|ref|YP_003711757.1| methionine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628974|emb|CBJ89559.1| methionine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 675

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 131/540 (24%), Positives = 229/540 (42%), Gaps = 47/540 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           KL ++ A+ Y N   H+GH  E I AD+  R+HR+ G +V F    D HG  I   AQ +
Sbjct: 7   KLLVTCALPYANGPIHLGHILEHIQADIWVRYHRMRGKEVHFVCADDAHGTPIMLKAQQS 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +  + + S   +       ISYD++  T  + +      ++ ++   G I     S
Sbjct: 67  GLSPEEMIAKVSLEHQQDFAGFAISYDNYHSTHSEENKALASHIYLELKKNGYIKNRTIS 126

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QWM 160
             +      +  D            E   G + +     ++P               +  
Sbjct: 127 QLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCGTTYSPTELINPRSVVSGATPEMR 186

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + E +FF L  + D L  +  S     L  +  N++  +  +GL+   ++R    +G ++
Sbjct: 187 DTEHFFFDLPVFSDMLQKWTRSGT---LQEQVANKMQEWFDAGLQQWDITRDAPYFGFEV 243

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAI 273
           PD P    YVW+DA   Y+     L +        +FW  D      H IGKDI+ FH++
Sbjct: 244 PDQPGKYFYVWLDAPIGYMGAFKNLCDKRSDLNFDEFWEKDSKTDLYHFIGKDIVYFHSL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +N   P  +F HG+I   G K+SKS G  I     ++ +  D LRY+   ++
Sbjct: 304 FWPAMLEGSNYRKPTNLFVHGYITVNGTKMSKSRGTFIKAETYLKHLDADCLRYYYAAKL 363

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + +   +RVN+D+ N + NL SR+   I K + G +        +D ++  
Sbjct: 364 SSRIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGFINKRFGGKLSAQ----LADPALYQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
                   I E+  N+   +A+ ++++L    +RY D Q PW + K          +  +
Sbjct: 420 KFVDAAHVIEEDFTNREFSKAIREMMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P L+ +    L        +  + Q L    +L   F  +F R 
Sbjct: 480 GINLFRVLMTYLKPVLPGLSVRAEAFLNTE---LTWDGIQQPLLNHDVL--PFKALFNRI 534


>gi|119775184|ref|YP_927924.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|187647769|sp|A1S798|SYM_SHEAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119767684|gb|ABM00255.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 675

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 130/542 (23%), Positives = 234/542 (43%), Gaps = 48/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q +   +      ++++D++  T    +      ++ K+ D G I   
Sbjct: 64  QQLGMAPEEMIAQVNVEHQQDFADFNVAFDNYHSTHSDENRALASEIYLKLRDGGYIKSK 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +      +  D            E   G +     A ++P +             
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDACGATYSPTELINPRSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L A++  L ++  S     L  E  N++  + + GL+   ++R    +G
Sbjct: 184 VMKETEHFFFDLPAFEGMLKAWTRSGA---LQSEMANKLDEWFEQGLQQWDITRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +     +  G     +FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNFCDKRGDINFDEFWAKDSSAEVYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLHGAGFRQPSSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D+S
Sbjct: 361 AKLSARIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAAV-----ADKS 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           ++         I E  + +   +A+ ++++L    + +     PW+L K +   + A  V
Sbjct: 416 LIDSFLAKQDVIAELYEAREYGKAMREIMALADVANGFVADAAPWQLVKQDDKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +P+LA  + D   +      +  LD  L  G  +   F P+ 
Sbjct: 476 CSNALNLFRILVTYLKPVLPRLAKDVEDFFRME---LTWDGLDSDL-SGHEI-APFKPMM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|156081857|ref|XP_001608421.1| methionine- tRNA ligase [Plasmodium vivax SaI-1]
 gi|148800992|gb|EDL42397.1| methionine- tRNA ligase, putative [Plasmodium vivax]
          Length = 886

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 181/510 (35%), Positives = 289/510 (56%), Gaps = 11/510 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK YI+TAI Y N  PHIGHAYE+++AD +AR+H+  G  V FTTG DEHG KIA  A
Sbjct: 218 KEEKFYITTAINYVNGDPHIGHAYEIVLADAIARYHKNIGRKVFFTTGADEHGLKIANQA 277

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D+N   F+++  +L +  D ++RTT ++H    + +W K  +  DIY G
Sbjct: 278 ARNNLTPQELCDRNVLKFKELNKLLHVDEDYYVRTTCEQHKKIAQEIWTKCEENKDIYLG 337

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY++R+E Y  ++E             +  ++ M+E  YFF +S YQ +L+ Y   
Sbjct: 338 EYEGWYNVREETYVPENEAKLMN--YRDPLNNIKLEKMKEPSYFFNMSKYQQRLIDYIME 395

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI P ++RNE++  +K  L DLS SR  F WGI +P D +++MYVW+DAL NY +  
Sbjct: 396 NPHFIQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDHKHVMYVWMDALINYYSNC 455

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
             ++     K  +WPAD+H+IGKDI+ FH + +P  L+S N+ LPK VF HGF+L   G+
Sbjct: 456 FIVEG----KEDYWPADVHLIGKDIVWFHTVIFPTILMSVNVALPKSVFCHGFVLAGDGK 511

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P E+IE  G DA R+ +++E   G D  +D D L    N+DLA+ IGNL
Sbjct: 512 KMSKSLGNVVNPFEIIESYGPDAFRFHVIKETKRGFDMRFDIDNLVDMCNSDLADTIGNL 571

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R++S+     +  IP      + D          +  +  +MQ   +     + +++ 
Sbjct: 572 VQRTLSLCQLSNESKIPPLFEQYDIDLPF--SLLHFINRVEFHMQTYCVQVCCEKTVNVC 629

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++++     PW+ K    D+   ++ + +E I  +A  L  F+P +A+++F  L    
Sbjct: 630 KDLNKFLTELAPWKYKNEEKDKKLHIIRIMMEAIYLIAHYLDIFIPSIASQVFQKLNTPK 689

Query: 482 ENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++          L+ G  ++   + +F +F
Sbjct: 690 KSIVDLNPWLNNLQEGVQINN-ENILFKKF 718


>gi|297191075|ref|ZP_06908473.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297150754|gb|EFH30771.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 516

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 181/519 (34%), Positives = 272/519 (52%), Gaps = 35/519 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + YI+T + Y NA+PH+G A E++ ADVLAR  R  G  V F TGTD++  K   AA+  
Sbjct: 17  RTYITTTVPYVNARPHLGFALELVQADVLARHGRRSGEQVRFLTGTDDNSLKNVLAAEAE 76

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124
           GV  + FVD+N+  F  +   L +S DDFIRT+ + RH      LW++ ++ GD+Y+  Y
Sbjct: 77  GVGVQEFVDRNAAAFAALRGPLALSSDDFIRTSSDPRHRAGVERLWQRCAEAGDLYRRHY 136

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y   ++ +G             Q + EE +FFRLS +   L        
Sbjct: 137 EGLYCVGCEQFYTPGDLEEG----RCPDHGTEPQRVSEENWFFRLSRHAGTLRDLITDGT 192

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
             I P  RRNEV+  ++ GL D S+SR   +   WGI +P DP  ++YVW DAL NY+T+
Sbjct: 193 LRIEPASRRNEVLGLIEGGLHDFSVSRSQSRARGWGIPVPGDPDQVVYVWWDALGNYVTS 252

Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            GY    D +  ++W      +H+ GK +LRFHA+YWPA LLSA LPLP  +  H ++  
Sbjct: 253 LGYGTGDD-TFDEWWRGSGRRVHLAGKGVLRFHAVYWPAMLLSAGLPLPTDILVHDYLTV 311

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G KISKS G  +DP+E+  + G DA+R++L+R++    D  + ++ L  R N+DLA G+
Sbjct: 312 DGRKISKSSGTTVDPVELAADAGTDAVRWWLLRDVPRVGDADFTRERLVDRANSDLAGGL 371

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNLV+R V+M+ +  DG  P       + + +   C    + I   +      RA A V 
Sbjct: 372 GNLVNRVVTMVHRYRDGRPPASRPLGLTSKPLAEACDDSPRLIAAALAGFDFRRAAAAVW 431

Query: 419 SLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAIL---LQAFVPKLAN 471
           ++V E +R  DA +PWE  K     +PD    +      +++   +L   L+ F+P  A 
Sbjct: 432 TIVEEANRCVDATRPWESAKAERAGDPDAGQRLDRALDALLQACLVLADRLEPFLPGAAA 491

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +I +                    G +L     P+FPR 
Sbjct: 492 RIEEQCTAV---------------GGVLPAPA-PLFPRI 514


>gi|157375788|ref|YP_001474388.1| methionyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083266|sp|A8FWN7|SYM_SHESH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157318162|gb|ABV37260.1| Methionine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 692

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 134/543 (24%), Positives = 233/543 (42%), Gaps = 48/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q ++  +      +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 64  QQLGIEPEEMIAQVNKEHQQDFADFNIKFDNFHSTHSVENRELSGEIYLKLRDAGFIKTR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +      +  D            E   G +     A +NP   ++          
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLIDPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L A+++ L  +  S     +  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPAFENMLSEWTRSGA---IQDEIANKLAEWFEQGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWSKDSTAEVYHFIGKDIVNF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGYRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D +
Sbjct: 361 AKLSNRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAK-----IADTT 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +        + I +  +N+   +A+ ++++L    + Y     PW+L K     D A  V
Sbjct: 416 LEETFLAKQEVIADLYENREFGKAMREIMALADIANAYVADAAPWQLIKDEAKQDEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA+ +   L        + +L   L  G  + K F  + 
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLADDVEAFLQFP---LTWDNLGADL-AGHEIAK-FKALM 530

Query: 508 PRF 510
            R 
Sbjct: 531 QRI 533


>gi|88799942|ref|ZP_01115514.1| Methionyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777373|gb|EAR08576.1| Methionyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 684

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 135/545 (24%), Positives = 236/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ +++A+ Y N Q H+GH  E I  D+  RF +  G + ++    D HG  +  
Sbjct: 1   MSAKRKILVTSALPYANGQLHLGHLMEQIQTDIWVRFQKSMGHECMYVCADDTHGTAVML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G + + ++++ + + +  ++   I +D++  T    +     +++ ++ + G I 
Sbjct: 61  RAEKEGKSPEAWIEKMNADHKADSEGFLIGHDNYYSTHSNENQHYAELIYSRLKENGHIK 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------- 160
                  Y    E +  D            E   G   +  +A + P + +         
Sbjct: 121 VKTIRQLYDPEKEIFLADRFVKGTCPKCKSEDQYGDACEVCSATYEPNELINPKSAYTGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF L  +Q  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPIEKESEHFFFDLPQFQTMLQEWTRSGT---LQDSVANKLSEWLDSGLQAWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDIL 268
           +G +IP  P    YVW+DA   Y+ +   L +     +   +W  D      H IGKDI+
Sbjct: 238 FGFEIPGAPGKYFYVWLDAPIGYMASFKNLCDRTDGLNFDDYWSKDSDAELYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L SA    P  VF+HG+I   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLTSAEFKTPDGVFAHGYITVNGEKMSKSRGTFIMASTYLKHLSPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   +     +RVN DL N   N+ SR    I K    +          D
Sbjct: 358 YAAKLGYGVEDIDLNLTDFAQRVNTDLVNKFVNIASRCAGFIKKGGGKLSDNIAEPELLD 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E + S        I    +++   +A+ +++ LV + + Y  A++PW L K         
Sbjct: 418 EVLGSK-----NLIASLYESREFSKAVREIMRLVDKANEYIQAKEPWALAKDESKAQEVQ 472

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + + + R L+I L   +P L  K+   L V  ++  F  LD  L  G  ++K F P
Sbjct: 473 DICSMGIHLFRALSIYLGPVLPALNEKVRAFLNV--DSLDFTDLDTTLT-GHAINK-FKP 528

Query: 506 IFPRF 510
           +  R 
Sbjct: 529 LLTRI 533


>gi|270346536|pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
           Modified Specificity
 gi|270346537|pdb|3H99|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
           Modified Specificity Complexed With Methionine
 gi|270346538|pdb|3H9B|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
           Modified Specificity Complexed With Azidonorleucine
          Length = 560

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 240/542 (44%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A  Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 18  KKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 77

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 78  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 137

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 138 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 197

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 198 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 254

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA    + +   L +  G      ++W  D      H IGKDI+ F 
Sbjct: 255 IPNAPGKYFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFL 314

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+LRY+   
Sbjct: 315 SLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTA 374

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A   +D  +
Sbjct: 375 KLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ASELADPQL 430

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               +   + I E  +++   +A+ ++++L    +RY D Q PW + K          + 
Sbjct: 431 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAIC 490

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +PKL  +    L        +  + Q L  G  ++  F  ++ 
Sbjct: 491 SMGINLFRVLMTYLKPVLPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYN 545

Query: 509 RF 510
           R 
Sbjct: 546 RI 547


>gi|160897286|ref|YP_001562868.1| methionyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160362870|gb|ABX34483.1| methionyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 717

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 148/559 (26%), Positives = 240/559 (42%), Gaps = 61/559 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 33  RKLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEK 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H   + +++ +   G I     
Sbjct: 93  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWHNTDAPENHVLAQQIYRDLKAAGFIETRTI 152

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +  +A + P   +             
Sbjct: 153 EQFFDTEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSAVYAPTDLINPYSALSGAKPVL 212

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E  N++  +             GL D  +
Sbjct: 213 KSSEHFFFKLSDPRCVEFLTEWTQDGQHVQPEVANKIKEWFGVRTNPDGTTSEGLGDWDI 272

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L +  G   + + AD      H IG
Sbjct: 273 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDRRGEDYEAYMADPTLEQYHFIG 332

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P K+  HGF+  + GEK+SKS G  +DP++ +  ++  
Sbjct: 333 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYLGLQMNP 392

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ D    RVN+DL     N+ SR+   I K +DG     G
Sbjct: 393 EWLRYYLGAKLNGKNEDIDFNPDDFMARVNSDLIGKYVNIASRAAGFIAKRFDG---KLG 449

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +E  +++L+      + + +  +N+   RA+ +++ L   V+ Y DA KPWEL K   
Sbjct: 450 TVSEDGQALLAQLRGQSEAVVQAFENRDTARAVREIMQLCDRVNEYVDANKPWELAKQEG 509

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L+  +P +A ++   L VA     F      L  G  +
Sbjct: 510 MDARLQDVCTTCIEAFRLLTIYLKPILPAVAEQVEGFLNVAP--LQFADAQNLLGAGHAI 567

Query: 500 -----------HKTFDPIF 507
                       K  + +F
Sbjct: 568 GLYKHLMQRVDVKQLEALF 586


>gi|254168412|ref|ZP_04875257.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289595772|ref|YP_003482468.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622693|gb|EDY35263.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533559|gb|ADD07906.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 734

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 130/543 (23%), Positives = 249/543 (45%), Gaps = 45/543 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++I  A  Y N   H+GH     + AD+ AR+ R+ G +VL  +G+DEHG  I   A+ 
Sbjct: 2   RIFIGVAWPYANGPIHLGHIVGAYLPADIFARYQRMQGNEVLMVSGSDEHGTPITITAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +   D+  +   ++ + L IS+D + RT+   H    +  + ++ + G +YK   
Sbjct: 62  EGKSPQEIADRYHKINSEVMEKLGISFDLYFRTSHPNHEKIVKDFFLRLWENGYLYKKKM 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y  + + +  D  V                                       P ++
Sbjct: 122 LLPYCPQCKRFLPDRYVVGTCPYCGYENAHGDQCDNCGRMLDPKDLINPRCVICGTPTEF 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  FF LS  +  +L + E    +           +FVK GLKD +++R   +WG++
Sbjct: 182 RETEHIFFALSKLEGTILKWLEDKTYWR--DNVIKFTRNFVKGGLKDRAITRD-LEWGVE 238

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +P +      +YVW DA+  YL+ +      +    + +  D      + +GKD + FH 
Sbjct: 239 VPLEGFENKKIYVWFDAVIGYLSASIEWARRNNKDWEAFWKDENTRHYYFLGKDNIPFHT 298

Query: 273 IYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I WPA L+    L LP  V ++ ++   GEK SKS G  +   E++E    D +R++   
Sbjct: 299 IIWPAMLMAHKGLNLPYNVVANEYLRFSGEKFSKSRGIGVWMPELLENFHPDIIRFYGTV 358

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
            +   +D  +  D   ++VN +L +   N V R++    +++  + P  G   E D   +
Sbjct: 359 NMPESRDSDFTWDDFVQKVNEELIDKFANFVHRALIFAYRNFGEVPPR-GEVDEVDREAI 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  + ++++ + M++  + +A  + ++L    + YFD + PW L K + ++ +T + ++
Sbjct: 418 KLIMQTIKKMNKYMESVELKKAFKEWLNLARYGNVYFDRKAPWALCKEDREKCATAINIS 477

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS----LDQRLKPGFMLHKTFDPIF 507
           +++++ LAIL   F+P  + +I+  L   +E+  FQ       + LK G  L K  + +F
Sbjct: 478 LQIVQALAILGAPFLPFTSERIWKFLG--NEDSIFQHKYIEAIKNLKVGEKL-KKPEVLF 534

Query: 508 PRF 510
            + 
Sbjct: 535 EKI 537


>gi|302833559|ref|XP_002948343.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f.
           nagariensis]
 gi|300266563|gb|EFJ50750.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f.
           nagariensis]
          Length = 643

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 193/515 (37%), Positives = 283/515 (54%), Gaps = 17/515 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I+T + Y NA PH+G AY  I ADV +RF RL G  V F TGTDEHG+KIA AA   G
Sbjct: 69  FTITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKIAAAASGRG 128

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++ +   D     + D+ D LDI YD F+RTTE R  +    +  +  ++GDIY   Y G
Sbjct: 129 LSPQEHCDDIVAQYTDLWDKLDIQYDRFVRTTESRLAELVVDVLVRCWERGDIYSADYEG 188

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E +    E    +  +       P Q  +E  YFFRLS Y  K +    S  +F
Sbjct: 189 WYCVDCEEFKGQSE----SQPRGCPTHRKPCQHRKEANYFFRLSKY-SKWIEELLSREDF 243

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           + P  RRNE++S+V+ GL+D S+SR   DWGI++P DP++ +YVW DAL  YL+     D
Sbjct: 244 VQPASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLLPPD 303

Query: 247 NPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            P  +       WPA +HVIGKDILRFHAIYWP  LLSA LPLP++V+ HGF+   G K+
Sbjct: 304 VPATTSEVPVHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPLPQRVYGHGFLTKDGLKM 363

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            K+LGN +DP  ++   G DA+R + ++EI  G+DG + +   +  VNA LAN +GN ++
Sbjct: 364 GKALGNTLDPRALVAAYGADAVRLYFMKEIVFGQDGDFSEVRFRDAVNAALANNLGNGLN 423

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++++ K +D  IP   +   +D  +  + +  L            H A   V++L S 
Sbjct: 424 RTLNLLAKFHDRTIPVDASSLPADLPLRQMAAERLPAAASAYSALSFHEAAEAVLALASR 483

Query: 424 VDRYFDAQKPW-ELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++Y +  +PW +LKK + +     + VL   +E +R +A+ L A  P L+ +I+  L  
Sbjct: 484 SNQYLEETQPWTKLKKGSDEEKAEAAAVLVAVLEAVRIVAVGLVALTPGLSRRIYSQLGF 543

Query: 480 ADENRCFQSL----DQRLKPGFMLHKTFDPIFPRF 510
           ++E     S        LK      +   P+F R 
Sbjct: 544 SEEQFQALSWADTAWGGLKAAHRTAEPA-PVFVRL 577


>gi|323144943|ref|ZP_08079504.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415282|gb|EFY06055.1| methionine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 674

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 143/538 (26%), Positives = 235/538 (43%), Gaps = 46/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I +D+  RF R  G +V +    D HG  +   A   G
Sbjct: 1   MLVTSALPYANGPIHLGHMLEHIQSDIFVRFQRAVGNNVYYVCADDCHGTPVMIKAGQMG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +  + Q  +  +   D   I+YD++ RT  + +    + ++KK+ DKG I     S 
Sbjct: 61  ITPEELILQVGKEHKQDFDDFLINYDNYYRTHSEENRIFSQSIYKKLRDKGFITTKTISQ 120

Query: 127 WYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------WME 161
            Y      +  D  V             G + +  +A +NP                  E
Sbjct: 121 LYDPEKNMFLPDRFVKGTCPKCGAPDQYGDNCEVCSATYNPTDLKNPYSTISGATPVLKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              YFF L  ++D L  Y  S     LP E  N++  +   GLKD  +SR    +G +IP
Sbjct: 181 SLHYFFDLPKFKDFLHDYINSGV---LPKEMANKLEEWFAQGLKDWDISRDAPYFGFEIP 237

Query: 222 DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           D      YVW+DA   Y+ +   + D        FW  D      H IGKDIL FH+++W
Sbjct: 238 DAENKYFYVWLDAPIGYMASFKNFCDKNGIDFDAFWNKDSDKELYHFIGKDILYFHSLFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIA 334
           PA L  ++  LP  +F HG++   G K+SKS G  I     ++ +  + LRY+       
Sbjct: 298 PATLKGSDHRLPTGIFVHGYVTVNGAKMSKSKGTFIKASTYLKHLKPECLRYYFASKMNN 357

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D     D    +VN+D+   + NL SR+   I K ++GM+        +D +++   
Sbjct: 358 QAVDLDLALDDFVAKVNSDIVGKVVNLASRTAGFINKRFNGMLADK----PNDPALMEKF 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
           +  + EI++    +    A+  ++SL  E +RY DA  PW + K     ++   V    +
Sbjct: 414 AAAMPEIKQAYDCRNYSDAVRAIMSLADEANRYIDAMAPWVIAKQEGQDEKLQAVCTDGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              + L   L   +P++  K  ++L    +   F +    L  G  ++K F P+F R 
Sbjct: 474 NCFKALITYLSPILPEVYLKAKELLN---DKLEFNNAASPLL-GHQINK-FTPLFTRI 526


>gi|119945339|ref|YP_943019.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|187647755|sp|A1SVA5|SYM_PSYIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119863943|gb|ABM03420.1| methionyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 686

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 237/543 (43%), Gaps = 47/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K+ ++ A+ Y N   H+GH  E + AD+  RF RL G ++ F    D HG  I   A
Sbjct: 4   QQRKILVTCALPYANGPIHLGHMLEHVQADIWVRFQRLRGHNIHFICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+     +     +        +IS+D++  T  + +      ++  + + G I   
Sbjct: 64  QEMGIKPTDMIADIRASHESDFSGFNISFDNYHSTHSEENQALSSQIYIALRENGYITNR 123

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM----------- 160
             S  +    + +  D  V             G +     A ++P + +           
Sbjct: 124 TISQLFDPEKKMFLPDRFVKGTCPDCKADDQYGDNCDACGATYSPTEMINPKSAVSGSTP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++D L  + +S     L  E  N+V  + ++GLK   ++R    +G
Sbjct: 184 IMKDTEHFFFDLPQFEDMLKVWTKSGA---LQTEMANKVGEWFETGLKQWDITRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +     +   +W  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKTEGLNFDDYWKKDSAAELYHFIGKDIVNF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAVLEGAGFRKPTAVNVHGYVTVNGAKMSKSKGTFIKASTYLDNLDPECLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + +   +RVN+D+ N + NL SR+   I K YDG +    +  +  +S
Sbjct: 361 AKLTSRIDDLDLNLEDFTQRVNSDVVNKLVNLASRTAGFITKKYDGQLSNHVSEPQLYQS 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            +   +     I    + +   RA+ ++++L    ++Y D + PW L K      +   +
Sbjct: 421 FIDAGTS----IAALFEQRDFARAIREIMALADIANKYIDEKAPWALAKQEGSEVKVQEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + + + R L   L+  +PKLA +  D L    E   ++ + + L  G  ++K F  +F
Sbjct: 477 CSMGINLFRVLMTYLKPIIPKLAARSEDFL---AETLDWEIIKKPL-AGHRINK-FKALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 QRI 534


>gi|239817050|ref|YP_002945960.1| methionyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239803627|gb|ACS20694.1| methionyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 704

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 145/548 (26%), Positives = 238/548 (43%), Gaps = 52/548 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N + HIGH  E I AD+  R  R++G +V F    D HG  I  
Sbjct: 1   MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGVT + FV + +   +   D   IS+D++  T    +H   + +++ +   G I 
Sbjct: 61  AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y      +  D  +             G + +   A + P + +         
Sbjct: 121 TKSVEQFYDPEKGMFLADRFIKGECPNCHAKDQYGDNCEVCGAVYAPTELINPYSALSGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF------VKSGLKDLSL 209
                  + +FF+LS  + +      +     +  E +N++  +       K GL D  +
Sbjct: 181 KPELRSSDHFFFKLSDPRCEAYLKEWTAAAGHVQSEVQNKIREWLYKDDEGKGGLGDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-------AKFWPAD--- 259
           SR    +GI+IPD P    YVW+DA   YL +   L +    +          + AD   
Sbjct: 241 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPDL 300

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EV 316
             +H IGKDI+ FH ++WPA L  +    P  V+ HG +   GEK+SKS G  IDP+  +
Sbjct: 301 EQVHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGTGIDPLRYL 360

Query: 317 IEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
              +  + LRY++  +     +D  ++ +    RVN+DL     N+ SR+   I K + G
Sbjct: 361 SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGG 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                G  +   +++L        ++      +   RAL +V++L  +V+ Y D  KPWE
Sbjct: 421 ---KLGEVSADGDALLFALRDAAPQLHSLYDGRDYARALREVMALADKVNEYVDQNKPWE 477

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K      R   V  V +E  R L + L+  +P LA  +   L +  E   +    Q L
Sbjct: 478 LAKKEGQEARLHDVCTVCIEAFRLLTLYLKPVLPALAANVEAFLRI--EPLAWADAAQSL 535

Query: 494 KPGFMLHK 501
             G  + +
Sbjct: 536 PAGHAIGE 543


>gi|304373127|ref|YP_003856336.1| methionyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309318|gb|ADM21798.1| methionyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 510

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 172/512 (33%), Positives = 278/512 (54%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y +   HIGH Y   +A V+ R+ +L G D    TG+DEHG KI + A+
Sbjct: 2   KKTFYVTTPIYYASGDLHIGHLYTTTLAWVIKRYKQLVGFDTKMLTGSDEHGLKIQQKAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  ++FVDQ  + F ++   LDI YD F RTT  +H      +++K+ +KG IYKG 
Sbjct: 62  QNKLDIQIFVDQVVKKFENLWQKLDIDYDFFSRTTSDKHKKIVAQIFEKMLEKGLIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+ DE +    +        Y+    N +++ E+E YFF +  +   LLSY++ +
Sbjct: 122 YSGWYSISDEEFLTPTQAVLKNGKYYHPVSDNLLEYFEQETYFFNMKKFAPWLLSYWKEN 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P F++  + +NE+     + GL+DLS++R   +WGIK+  D ++ +YVW+DAL NYLT  
Sbjct: 182 PIFVINKKIQNELEKNFLEKGLEDLSVTRTDLEWGIKVISDQKHTIYVWLDALFNYLTAL 241

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            +    D    K+W      LH++GK+I RFH IYWP FL S ++ LP  + SHG+I+  
Sbjct: 242 NFDLENDQDYQKYWKNGDQILHIVGKEITRFHCIYWPIFLKSLDIKLPTSILSHGWIITN 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DPI+++E+   + ++ F   +I  G DG +D++ L    N+ LAN  G
Sbjct: 302 EGKMSKSKGNVVDPIKLLEQYDKEVIKLFFASQIPVGSDGIFDQENLTLFYNSTLANNFG 361

Query: 360 NLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+++MI K++D  +        E D+ I            ++  N  + +A  ++ 
Sbjct: 362 NLITRTITMIFKNFDRAVRYKKEELLEEDKQIFEAIIETKNNYVKHFDNYELDKAFKEIF 421

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           SL  +++ Y D  KPW   +TN DR   +L   +  I  +  LL   +   + K+  IL 
Sbjct: 422 SLSKKLNGYIDITKPWS--ETNKDRLEVILNTLINGIYAVNTLLSVCLKNTSQKVLKILK 479

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  E      ++   K   +     + IF R 
Sbjct: 480 L--EKNDINQVENFSKFDNLFLDKAEVIFERM 509


>gi|329297896|ref|ZP_08255232.1| methionyl-tRNA synthetase [Plautia stali symbiont]
          Length = 677

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 130/541 (24%), Positives = 236/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I ADV  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNQVFFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +         +ISYD++  T    +     +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKQEHETDFAGFNISYDNYHSTHGDENRQLSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++   L ++  S     L  +  N++  + ++GL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSAMLQAWTRSGA---LQEQVANKMQEWFEAGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
           I   P   +YVW+DA   Y+ +   L +        +FW  +      H IGKDI+ FH+
Sbjct: 243 ILGAPGKYLYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWKKNSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +
Sbjct: 303 LFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNAD+ N + NL SR+   I K ++G +    A   +D+++ 
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFNGQL----ASELADQALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                  ++I E   ++  +RA+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 QTFVDASEKIGEAWASREYNRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    +  A     +  + Q L         F  ++ R
Sbjct: 479 MGINLFRVLMTWLKPVLPSLSERAEAFMQSA---LSWDGIAQPLL--NHSVAPFKALYGR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|152979917|ref|YP_001352802.1| methionyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|187647729|sp|A6SX05|SYM_JANMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|151279994|gb|ABR88404.1| Methionyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 700

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 150/534 (28%), Positives = 235/534 (44%), Gaps = 41/534 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  AA+ 
Sbjct: 7   RKLFVTTALPYANGAFHVGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEK 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI----------- 113
           AG+T + FV   +   +   D   I +D++  T    +H+  R +++++           
Sbjct: 67  AGLTPQQFVANIAAGRKQYLDGFHIEFDNWSSTDSPENHELSREIYRRLRDDAKLITTKS 126

Query: 114 -SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE---------- 162
                D  K  +     ++ E      +   G   +  +A + P                
Sbjct: 127 VEQFYDPVKEMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKHPYSTLTGATPV 186

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF--VKSGLKDLSLSRKTFDW 216
               + +FFRLS  +        +     L  E  N+   +   + GL D  +SR    +
Sbjct: 187 RKSSDHFFFRLSDPKCVAFLREWALDGQRLQSEVANKAKEWLEGEGGLGDWDISRDAPYF 246

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           GI+IPD P    YVW+DA   YL T     +  G     + AD      H IGKDI  FH
Sbjct: 247 GIEIPDAPGKYFYVWLDAPVGYLATLKNYFDKTGRDFDAFMADPSTEQYHFIGKDITYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYFLV 330
            ++WPA L  A++ +P  VF HGFI   GEK+SKS G  I P+  +   +  + LRY++ 
Sbjct: 307 TLFWPAMLKFADMKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYLEIGMNPEWLRYYIA 366

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D  +  D    RVN+DL     N+ SR+   I K +DG + T  A +  D++
Sbjct: 367 AKLSSKVEDIDFTSDDFIARVNSDLIGKYINIASRAAGFITKKFDGRVATDWATS--DDA 424

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
            LS    V  EI+     +   +AL  ++     ++ Y DA KPWEL K          V
Sbjct: 425 FLSRLRNVASEIQALYDQREYGKALRAIMEQADAINAYVDANKPWELAKDPAKEAALQEV 484

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               +E  R L I L+  +P LA ++   L +A     +  +   L  G  ++ 
Sbjct: 485 CSRLLEAFRILTIYLKPVLPALAKQVEAQLNIAPLE--WHHIITPLPHGHQINP 536


>gi|56459820|ref|YP_155101.1| methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|68565965|sp|Q5R0G6|SYM_IDILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56178830|gb|AAV81552.1| Methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 677

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 136/540 (25%), Positives = 223/540 (41%), Gaps = 47/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   HIGH    I AD+  RF +L G +  F    D HG  I   AQ 
Sbjct: 6   RKILVTNALPYANGPIHIGHMLGYIQADIWVRFQKLRGNECHFVCADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +    R+         + +D +  T    + +    ++ ++   G I     
Sbjct: 66  LGITPEQMIGDMQRSHESDFSDFLVGFDHYYSTHSDENRELAETIYTRLDKAGHIKTKVI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QW 159
              Y  + E +  D            E   G +     A + P               + 
Sbjct: 126 EQLYDPQKEMFLPDRFVKGECPDCGAEDQYGDNCDVCGATYAPTDLKNPKSVVSGAEPEL 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF L A+ D L S+  S     L  E  N++  + + GL+   +SR    +G K
Sbjct: 186 RESEHYFFDLPAFGDMLKSWTRSGS---LQNEMANKLNEWFEQGLQRWDISRDAPYFGFK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP       YVW+DA   Y+++     +         +W AD      H IGKDI+ FH+
Sbjct: 243 IPGTENKYFYVWLDAPIGYMSSFKNYCSTTGKADWDTYWQADSEAELYHFIGKDIIYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A+   P  V++HGFI   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 303 LFWPAMLKGADFRQPTNVWAHGFITVNGTKMSKSKGTFIKARTYLEHLDPEYLRYYFAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   +     +RVN+DL   + N+ SR    I K +DG + +      +D ++L
Sbjct: 363 LTSRIDDLDLNLTDFAQRVNSDLVGKVINIASRCAGFIQKKFDGRLSS----NVADSALL 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                    I E  + +   RA+  +++L    ++Y   ++PW+L K          +  
Sbjct: 419 EDFQLAGDNIAELYEKREFSRAMRDIMALADRANQYIADKEPWQLIKQEGSEQEVHEICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L + L   VPKL  ++   L    +N  + S    L     + K F  +  R
Sbjct: 479 LGINLFRVLMVYLAPVVPKLTEEVQSFLN---DNFTWDSHKTALT-DHPIDK-FKALMQR 533


>gi|91217588|ref|ZP_01254546.1| methionyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184268|gb|EAS70653.1| methionyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 686

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 139/550 (25%), Positives = 243/550 (44%), Gaps = 42/550 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK  ++  ++ A+ Y N   HIGH A   + AD+  R+ +L G DV F  G+DEHG  I 
Sbjct: 1   MKNPKRYTVTAALPYTNGPIHIGHLAGVYVPADIYVRYLKLKGEDVAFLCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+ +   +       I +D++ RT+ K HHDT    +K + DKG  
Sbjct: 61  IKAKKEGISPQDVVDKYNAIIKQSFQDFGIQFDNYSRTSAKIHHDTATEFFKTMYDKGKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +      Y  +   +  D  V             G   +   +  N    +  +     
Sbjct: 121 IEETTEQLYDAKANQFLADRFVTGTCPKCGNEEAYGDQCEKCGSSLNATDLINPKSAITG 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +F  L  Y   L  +     +         +  S++  GL+  +++R   
Sbjct: 181 DVPTLKSTKHWFLPLDQYDGFLKDWILKDHKKDWKANVYGQCKSWLDEGLRARAVTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y+++T      +G   + +  D     +H IGKD 
Sbjct: 240 DWGIPVPVKGGEGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDKDTKLVHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA-- 324
           + FH I +PA      +  LP  V ++ F+  +G K+S S    +   + +E+       
Sbjct: 300 IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGRKLSTSKNWAVWLHDYLEDFPGKEDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R N++L    GN ++R V +  K Y+G++P    F+
Sbjct: 360 LRYVLTANAPETKDNDFTWKDFQTRNNSELVAIYGNFINRVVVLTHKYYEGVVPKAFDFS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E+D  +         +I  +++      A   +++L    ++Y   ++PW+L+KTNP+R 
Sbjct: 420 ETDLKVFEDIKTFPSQISASIEKYRFREAQGIMMNLARLGNKYLADEEPWKLQKTNPERT 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS----LDQRLKPGFMLH 500
           ST++YV ++V   LA+L + F+P  A K+  +L     +  F +    LD+ L P     
Sbjct: 480 STIMYVALQVSSALAVLSEPFLPFTALKLKTMLNFEGFSHPFWNDISKLDELL-PSHHNI 538

Query: 501 KTFDPIFPRF 510
            T + +F + 
Sbjct: 539 NTAEFLFSKI 548


>gi|326924254|ref|XP_003208345.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 569

 Score =  339 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 173/512 (33%), Positives = 264/512 (51%), Gaps = 31/512 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKAAQ 63
             L +ST I Y N  PHIGH Y  ++AD L R   L G      +TGTDEHG KI +AA 
Sbjct: 20  RHLLLSTPIFYANGPPHIGHLYSALLADALHRQRGLRGAGPSRLSTGTDEHGLKIQQAAA 79

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG +      + S  F        +S+ DFIRT+E RH       W  + ++G +YKG 
Sbjct: 80  AAGTSPPELCARISALFHQAFTQAAVSFTDFIRTSEPRHCQAVCHFWAALQERGALYKGT 139

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLS 178
           Y GWY   +E +  + ++ +  D Q +  +      + V W +EE Y F+LSA+QD L  
Sbjct: 140 YEGWYCTAEEGFLPESQLTERVDAQGFTHKVSAESGHEVHWTKEENYMFKLSAFQDPLQK 199

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
           +   +P  I P      V+ ++   L DLS+SR+     WGI +P D    +YVW+DAL 
Sbjct: 200 WLRDNPRAISPEPFYQRVLCWLGEDLPDLSISRERSRLQWGIPVPSDSTQTIYVWVDALV 259

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYL+  GY +        +WPA  HV+GKDIL+FHA+YWPA L++A L  P+++F H   
Sbjct: 260 NYLSVLGYPETH----GGWWPAAHHVVGKDILKFHAVYWPALLMAAGLSPPERIFVHSHW 315

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K+SKSLGNVIDP    E   VD  RYFL+R+    +D  Y  + + K +N++LA+
Sbjct: 316 TVRGQKMSKSLGNVIDPFVCNERYTVDGFRYFLLRQGVPERDCDYYDEKVVKVLNSELAD 375

Query: 357 GIGNLVSRSVSMILKDYDGMIP----------------TPGAFTESDESILSVCSRVLQE 400
            +G L++RS +  +   +                      G     D   +   + +  +
Sbjct: 376 ALGGLLNRSTAPGINPSNTYPCFSETCFPKVVDYMEAEALGRAAAEDYEFVVAVASLPLQ 435

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQ 457
           +    ++  I++AL  +   V + + +F   +PW+L + +P       T+++VT+E +R 
Sbjct: 436 VASYFEDFQIYKALECIALCVRQTNGFFQRHRPWKLDRKDPAEKLWLDTIIHVTLECLRV 495

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              LLQ  +P +A+K+   L V  E R   SL
Sbjct: 496 YGTLLQPVIPHIADKLLSRLAVEAEERKISSL 527


>gi|89073403|ref|ZP_01159927.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050890|gb|EAR56364.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 681

 Score =  339 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 131/541 (24%), Positives = 228/541 (42%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH  E + AD+  R+ RL G +V F    D HG  I   AQ 
Sbjct: 6   RKILVTCALPYANGSIHLGHMLEHVQADIWVRYQRLRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + S+  +      DI + ++  T    + +    ++ ++ D   I     
Sbjct: 66  MGMEPEQMIAEVSKEHQTDFAGFDIDFSNYHSTHSPENRELASFVYTQLKDNRFITSRTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P                 
Sbjct: 126 SQLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  + +S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 186 KDSEHFFFDLPQFESMLKEWTKSGA---LQEETSNKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+
Sbjct: 243 IPGETGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF HG++   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVN+D+ N I NL SR+   I K +DG +       E    + 
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPE----LY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +        I E  +++   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 419 AEFVAAADRIGELYESREYGRAIREITALADKANQYVDEKAPWVVAKQEGKDQELQDICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L   L   +PKL  +    L    E   +++++Q L     + K F  +F R
Sbjct: 479 VGINLFRVLMAYLIPVMPKLTERSEAFLN---ETLTWETIEQPLTA-HEVTK-FKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|308187517|ref|YP_003931648.1| Methionyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058027|gb|ADO10199.1| Methionyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 677

 Score =  339 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 233/538 (43%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            ++SYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKSEHEADFAGFNVSYDNYHSTHGDENRELSALIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + ++ +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPIL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  + +  +       L  +  N++  + +SGL+   +SR    +G +IPD
Sbjct: 186 RDSEHFFFDLPSFSAMLQAWTRSGALQDQVANKMQEWFESGLQQWDISRDAPYFGFEIPD 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWRKDSTTELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSNFRKPNNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKL----AAELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I +    +   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 VDASEKIGDAWAAREYSRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P L+ +    L        + ++ Q L     +   F  ++ R 
Sbjct: 482 NLFRILMTWLKPVLPSLSARAEGFLNCE---LSWDAIAQPLL-DHQV-APFKALYSRI 534


>gi|304397467|ref|ZP_07379345.1| methionyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355085|gb|EFM19454.1| methionyl-tRNA synthetase [Pantoea sp. aB]
          Length = 677

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 233/538 (43%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            ++SYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGIAPEQMIAEMKSEHEADFAGFNVSYDNYHSTHGDENRELSALIYGRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
           S  Y      +  D  V             G + +  +A ++P + ++ +          
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCSATYSPTELIDPKSVVSGATPVL 185

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  + +  +       L  +  N++  + +SGL+   +SR    +G +IPD
Sbjct: 186 RDSEHFFFDLPSFSAMLQAWTRSGALQDQVANKMQEWFESGLQQWDISRDAPYFGFEIPD 245

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ FH+++W
Sbjct: 246 APGKYFYVWLDAPIGYMGSFKNLCDKRGDIDFDEFWRKDSTTELYHFIGKDIVYFHSLFW 305

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D+LRY+   +++ 
Sbjct: 306 PAMLEGSNFRKPNNLFVHGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSS 365

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +   +RVNAD+ N + NL SR+   I K +DG +    A   +D ++    
Sbjct: 366 RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFITKRFDGKL----AAELADPALYQTF 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
               ++I +    +   RA+ ++++L    +RY D Q PW + K          +  + +
Sbjct: 422 VDASEKIGDAWAAREYSRAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGI 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P L+ +    L        + ++ Q L     +   F  ++ R 
Sbjct: 482 NLFRILMTWLKPVLPSLSARAEGFLNCE---LSWDAIAQPLL-DHQV-APFKALYSRI 534


>gi|319795385|ref|YP_004157025.1| methionyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597848|gb|ADU38914.1| methionyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 700

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 145/548 (26%), Positives = 238/548 (43%), Gaps = 52/548 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N + HIGH  E I AD+  R  R++G +V F    D HG  I  
Sbjct: 1   MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGVT + FV + +   +   D   IS+D++  T    +H   + +++ +   G I 
Sbjct: 61  AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y      +  D  +             G + +   A + P + +         
Sbjct: 121 TKSVEQFYDPEKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF------VKSGLKDLSL 209
                  + +FF+LS  + +      +     +  E +N++  +       K GL D  +
Sbjct: 181 KPELRSSDHFFFKLSDPRCEAYLKEWTAAPGHVQSEVQNKIREWLYKDDEGKGGLGDWDI 240

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-------AKFWPAD--- 259
           SR    +GI+IPD P    YVW+DA   YL +   L +    +          + AD   
Sbjct: 241 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPDL 300

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV- 316
             +H IGKDI+ FH ++WPA L  +    P  V+ HG +   GEK+SKS G  IDP++  
Sbjct: 301 EQVHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGTGIDPLKYL 360

Query: 317 IEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
              +  + LRY++  +     +D  ++ +    RVN+DL     N+ SR+   I K + G
Sbjct: 361 SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGG 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                G  +   +++L        +I      +   RAL +V++L  +V+ Y D  KPWE
Sbjct: 421 ---KLGEVSADGDALLFALREAAGQIHSLYDGRDYARALREVMALADKVNEYVDQNKPWE 477

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K      R   V  V +E  R L + L+  +P LA  +   L ++     +    Q L
Sbjct: 478 LAKKEGAEARLHDVCTVCIEAFRLLTLYLKPVLPALAVNVEAFLKISP--LVWSDAAQPL 535

Query: 494 KPGFMLHK 501
             G  + +
Sbjct: 536 PAGHAIGE 543


>gi|284036390|ref|YP_003386320.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815683|gb|ADB37521.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 682

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 147/547 (26%), Positives = 247/547 (45%), Gaps = 41/547 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  ++  ++ A+ Y N   HIGH A   + AD+  R+ R  G DV F +GTDEHG  I 
Sbjct: 2   LENPQRYTVTAALIYANGPIHIGHIAGCYLPADIYVRYLRSTGKDVAFISGTDEHGVPIT 61

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+     +       IS+D + RT+   HH+T +  +  + +KGD 
Sbjct: 62  IKAKKEGITPQEVVDKYYGQIKQAFSDFGISFDIYSRTSNAIHHETSQEFFTNLYNKGDF 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------ 162
            +     +Y      +  D  +             G   +      +P + +E       
Sbjct: 122 DEEVTEQYYDEVAGQFLADRYIVGTCPVCGNPNAYGDQCERCGTALSPTELIEPHSTLSG 181

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + +F  L   Q K+  Y  SHPE+        +  S++K GL+  +++R   
Sbjct: 182 SKPVLRSTKNWFLPLDRMQPKIEEYVNSHPEWK--TNVAGQCQSWLKEGLRPRAMTRD-L 238

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGIK+P  D    ++YVW DA   Y++ T       G   + +  D     +H IGKD 
Sbjct: 239 DWGIKVPLPDADGKVLYVWFDAPIGYISMTKEWAAEQGRDWELYWRDEHTKLVHFIGKDN 298

Query: 268 LRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +PA L+   +  L   V ++ F+  +G+KIS S    +   E +EE+    D 
Sbjct: 299 IVFHCIIFPAMLMAEGSFILADNVPANEFMNLEGDKISTSRNWAVWLHEYLEELPGKQDV 358

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + R NA+L    GN V+R+V +  K  DG +P  G  T
Sbjct: 359 LRYVLAANAPETKDSEFTWKDFQTRNNAELVGIFGNFVNRAVVLTQKFCDGKVPAIGELT 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D+ IL   +     I + +       AL  ++ L    ++Y    +PW++ KT+P RA
Sbjct: 419 AYDQQILDELALFPDRIGQAIGAYKFREALGHLMDLARLGNKYLAETEPWKVVKTDPLRA 478

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKPGFMLHKTF 503
           +T+L + +++   L+I+ + F+P  + K+ + L + +  N         L  G  L K  
Sbjct: 479 NTILNIALQISANLSIVCEPFLPFTSQKLRNQLNITEHFNWTNAGRADLLVTGTELGK-G 537

Query: 504 DPIFPRF 510
           + +F + 
Sbjct: 538 ELLFAKI 544


>gi|303273506|ref|XP_003056114.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462198|gb|EEH59490.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 600

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 187/532 (35%), Positives = 287/532 (53%), Gaps = 32/532 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK +++T I Y N QPHIGH Y   IAD  ARF R  G DV F TGTDEHG K+ ++AQ 
Sbjct: 61  EKCFVTTPIYYVNDQPHIGHVYTSTIADAYARFQRSRGRDVFFLTGTDEHGLKVEQSAQK 120

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +   D+NS  FR + D + I++D FIRTTE  H    +    K+ +KGD+Y G +
Sbjct: 121 RGISPQELADENSATFRQVLDDMGITFDGFIRTTEPYHKSQVQHFVDKLREKGDVYLGKF 180

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            GWY    E YY   E                +    EE Y+F+LSAYQ +L   +E  P
Sbjct: 181 EGWYDEGQEEYYT--ETKAKELDYKSPVSGKDMARSSEENYYFKLSAYQRQLEKLHEECP 238

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +F+ P  RRNE++S +  GL D+ +SR  F WGI +P+D  +I+YVWIDAL NY+T  G 
Sbjct: 239 DFLSPPARRNEILSRLSQGLNDVPISRTNFKWGIAMPNDDNHIIYVWIDALLNYITALGL 298

Query: 245 LDNPDG--------------SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
            + P                    +WPA LH++ K+I  FHA+ WPA L++  +PLP++V
Sbjct: 299 AEEPSQPAASAGVATRRLKGELKDYWPASLHIMAKEISWFHAVIWPALLMALEMPLPERV 358

Query: 291 FSHGFILHKGEKISKSLGNVIDPIE---VIEEVGVDALRYFLVREIAC-GKDGFYDKDGL 346
            +HGF +  G+K+SKSLGN +D        +  G+D+ RYFL+ +     +D  +    +
Sbjct: 359 HAHGFWIRDGKKMSKSLGNFVDLKTITRYTDHYGLDSFRYFLLVDGPIAAQDANFASSRV 418

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCSRVLQ 399
           ++  N DL N +GN +SR+ +M+ K Y+G+IPT          F +  +  + V +    
Sbjct: 419 QEVYNTDLVNTLGNSLSRTTAMVNKYYNGIIPTEQQIQGIRITFGKRYDWPV-VTAEAAN 477

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQ 457
           ++   ++     +A    ++LV++VD + +  +P+ L K  T  +    VLY  +EV+R 
Sbjct: 478 QVMHAVEALEFPKAATAAVALVAKVDHFINELEPFRLAKDETKAEELGAVLYQCLEVLRI 537

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             +LL+ F+P    ++ + L +       +     L+PG  + K    +FPR
Sbjct: 538 ACVLLEPFLPNKMREVSENLDLGHGTLDERVKWGLLQPGSTVKKMT--LFPR 587


>gi|237756467|ref|ZP_04585002.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691368|gb|EEP60441.1| methionyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 559

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 179/432 (41%), Positives = 265/432 (61%), Gaps = 11/432 (2%)

Query: 80  FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           F+++   L+ISYD FIRTT+  H    + +++K  + GDIY   Y  +Y +  E +  + 
Sbjct: 9   FKELWRKLNISYDRFIRTTDPDHIKAVQYIFQKCYENGDIYLSEYESYYCVGCEEFKTET 68

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E+              P + ++EE YFFRLS Y DKLL +YE +PEFI P  R+NEV+SF
Sbjct: 69  EIKDYD--YKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEKNPEFIQPDFRKNEVVSF 126

Query: 200 VKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           VK GLKDLS+SR      WGI +P DP + +YVW DALTNYLT  GY +    +  +FWP
Sbjct: 127 VKQGLKDLSVSRKRDRVAWGIPVPFDPSHTIYVWFDALTNYLTAVGYPE----NLNEFWP 182

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+H++GKDILRFHA+YWPAFL+SA L +PKKVF+HG+   +G K+SKSLGNV+DP +  
Sbjct: 183 ADVHIVGKDILRFHAVYWPAFLMSAGLEIPKKVFAHGWWTVEGHKMSKSLGNVVDPFKAA 242

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +E GVD LRYFL+RE+  G DG + K  +  R+N+DLAN +GNL+SRS++MI K  +G I
Sbjct: 243 DEFGVDQLRYFLLREVPFGLDGDFSKSAVINRINSDLANDLGNLISRSLTMIHKFQNGKI 302

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             P  F E +E   +V S+ L+  +  +Q     ++L +V   +  +++Y    +PW+L 
Sbjct: 303 ERPSIFKEIEEEYKNVYSKTLENYKNFIQRLEFSKSLEEVWQFIDWLNKYIVKVEPWKLN 362

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           K + +   T LY  V+ I  +  +L  F+P+   +  ++L + +  +  +          
Sbjct: 363 KEDKEYLKTTLYTLVDGIYTVVWMLNPFMPQKMAEALNMLNINEIKKDIK--PYSFPAEI 420

Query: 498 MLHKTFDPIFPR 509
            +++   P+FPR
Sbjct: 421 AINQVV-PLFPR 431


>gi|308803669|ref|XP_003079147.1| Methionyl-tRNA synthetase, class Ia (ISS) [Ostreococcus tauri]
 gi|116057602|emb|CAL53805.1| Methionyl-tRNA synthetase, class Ia (ISS) [Ostreococcus tauri]
          Length = 577

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 181/516 (35%), Positives = 288/516 (55%), Gaps = 18/516 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I Y N QPHIGH Y   +AD  AR+ R  G DV F TGTDEHG K+ ++A   G+
Sbjct: 53  YVTTPIYYVNDQPHIGHVYTSTVADAYARYARARGADVFFLTGTDEHGLKVEQSADKRGI 112

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             +   D+NS+ FRD+    DIS+DDFIRTT+ RH    R L + + ++  +Y G + GW
Sbjct: 113 EPQALADENSQKFRDVMTSYDISFDDFIRTTDARHERQVRALVEALQERDAVYLGQFEGW 172

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y    E YY + +  K  D +   +  + V+   EE Y+FRLS +Q +L + +  +PEF+
Sbjct: 173 YDEGQEEYYTESK-AKELDYKSPISGKDMVR-SSEENYYFRLSKFQKELEALHADNPEFL 230

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT----TTG 243
            P  RRNE+I  +  GL D+ +SR  F WGIK+P+D ++++YVWIDAL NY+T      G
Sbjct: 231 TPSARRNEMIQRLNEGLNDVPISRTNFKWGIKMPEDEKHVIYVWIDALMNYITAIGVGDG 290

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             D     ++K+WPA +H++ K+I  FH++ WPA L++ +LPLP++V +H F + +G K+
Sbjct: 291 KDDAVYSERSKYWPASVHIMAKEISWFHSVIWPALLMALDLPLPQRVHAHAFWIREGRKM 350

Query: 304 SKSLGNVID---PIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIG 359
           SKSLGN +D        E  G+DA+RY+L  E      D  +  D +++  ++DL N +G
Sbjct: 351 SKSLGNFVDLACMDRFKEHYGLDAIRYYLAVEGPIGANDANFSADRVQEIYSSDLVNTLG 410

Query: 360 NLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N VSR+ +M+ K +DG + +        T  +  + +  S  +++  +      + RA A
Sbjct: 411 NSVSRTTAMVNKYFDGEVQSEELNGARVTFENWDMPARTSACVEDALKAYDKLDLPRAAA 470

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKI 473
               ++ +VD +    +P+ + K    RA     LY  +E +R   +LL+  +P    + 
Sbjct: 471 AAKQIIMDVDVFITETEPFRMAKDASKRAELSACLYQCLESLRIACVLLEPLMPNKMAEF 530

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
              + + +     ++    LKPG  + K    +FPR
Sbjct: 531 DAGVGLGEGTMDERTTWGGLKPGTKVQKL--ALFPR 564


>gi|254448547|ref|ZP_05062007.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261930|gb|EDY86215.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 680

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 128/544 (23%), Positives = 233/544 (42%), Gaps = 45/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R ++ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I  
Sbjct: 1   MSDRRRILMTSALPYANGSIHLGHMVEYIQTDIWSRYQKLRGHECYYVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ GVT +  +++  +  R      +I +D +  T    + +    ++  + + G I+
Sbjct: 61  KAQSEGVTPEQLIEKIGQEHRADFADFNIGFDHYHVTHSPENRELSSQIYLALREAGHIH 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
                  Y    + +  D  +             G   +   A + P +           
Sbjct: 121 SRVIEQAYDPEAKMFLPDRFIKGDCPKCGSDDQYGDSCEKCGATYQPTELKNPHSVISGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E +FF+L  ++  L  + +      +     N++  + +SGL+D  +SR    
Sbjct: 181 TPITKESEHFFFQLKDFEAFLQQWMQDSD---VQSGVVNKMNEWFESGLQDWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IPD P    YVW+DA   Y+ +      +      +FW AD      H IGKDI  
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPVGYMASFRKLCSDQGIDFDQFWAADSDAELYHFIGKDIAY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L  A    P  VF HGF+   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHTLFWPAMLKGAGFRPPSGVFCHGFLTVDGQKMSKSRGTFIKARTYLDHLSPEYLRYYF 357

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++  G +D     +  ++RVN+DL   + N+ SR    + K  +G +          +
Sbjct: 358 AAKLGAGLEDIDLSLEDFRQRVNSDLVGKVINIASRCAGFVKKLGEGQLSAQLGR----Q 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            +    +     I +  + +    A+ Q++ L    + +    +PW L K     D   T
Sbjct: 414 DLFDQAASASANIADLYEARNYREAMRQIMHLADTANTFIAEAEPWVLAKQEGKQDDVVT 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +    + + RQ+ + L+  +P+LA  +   L +  E   +Q +   L  G  ++K F P+
Sbjct: 474 ICSDGINLFRQIIVYLKPVLPELARGVEQFLNI--EPLAWQDVQTPLL-GHRINK-FKPL 529

Query: 507 FPRF 510
             R 
Sbjct: 530 MQRI 533


>gi|127512502|ref|YP_001093699.1| methionyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|187647772|sp|A3QD92|SYM_SHELP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|126637797|gb|ABO23440.1| methionyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 673

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 228/543 (41%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ ARF +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWARFQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ   +  +  + Q  +  +      +I +D+F  T    + +    ++ K+ D G I  
Sbjct: 63  AQQLSMAPEEMIAQVQKEHQQDFADFNIQFDNFHSTHSDENRELASEIYLKLRDGGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P              
Sbjct: 123 KTISQLFDPEKSMFLPDRFVKGTCPKCKSVDQYGDNCDSCGATYSPTDLIDPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKETEHFFFDLPAFEDMLKEWTRSGS---LQQEMANKLGEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L N        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRSDLNFDEFWAKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGFRKPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLNPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKV-----ADA 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           S+          I E  + +   +A+ ++++L    + +     PW+L K     + A  
Sbjct: 415 SLTETFLAKADAIAEFYETREFGKAMREIMALADIANAFVADAAPWQLVKEEDKQEEAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +PKLA  +   L +      +  L + L  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPKLAQDVEAFLQLE---LTWDDLAKDL-SGHEI-APFKAL 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|159465763|ref|XP_001691092.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279778|gb|EDP05538.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 526

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 192/526 (36%), Positives = 285/526 (54%), Gaps = 27/526 (5%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I+T + Y NA PH+G AY  I ADV +RF RL G  V F TGTDEHG+KIA AA+  G
Sbjct: 1   FTITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKIAAAAEKRG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +   D     + D+   LDI +D F+RTTE RH      +  +  ++GDIY   Y G
Sbjct: 61  MTPQAHCDDIVAQYTDLWGKLDIRFDRFVRTTESRHAALVVDVLGRCWERGDIYAADYEG 120

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E + ++ E+ +    +       P Q  +E  YFFRLS Y  K +    S  +F
Sbjct: 121 WYCVDCEEFKDEKEMAQ---PRGCPTHRKPCQHRKEANYFFRLSKY-SKEIEELLSRDDF 176

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           + P  RRNE++S+V+ GL+D S+SR   DWGI++P DP++ +YVW DAL  YL+     D
Sbjct: 177 VQPASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLLPED 236

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
               +    A  WPA +HVIGKDILRFHAIYWP  LLSA LP+P+KV+ HGF+   G K+
Sbjct: 237 VAPATSAVPAHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPVPQKVYGHGFLTKDGLKM 296

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            K+LGN +DP  ++   G DA+R + ++EI  G+DG + +   +  VNA LAN +GN ++
Sbjct: 297 GKALGNTLDPQALVSTYGSDAVRLYFMKEIIFGQDGDFSEGRFRDVVNAALANNLGNGLN 356

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+++++ K +D  +P   A   +D  +  + +  L        +   H A   V++L S 
Sbjct: 357 RTLNLLAKFHDSAVPLDSASLPADLPLRQLAAEKLPAAAAAYGSLSFHEAAEAVLALASR 416

Query: 424 VDRYFDAQKPW-ELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++Y +  +PW +LKK   +     + VL   +E +R +A+ L    P L+ +I+  L  
Sbjct: 417 SNQYLEETQPWTKLKKGTDEEKAEAAAVLVAVLEAVRCVAVGLAPLTPGLSRRIYAQLGY 476

Query: 480 ADEN---------------RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +D                     S    L+ G    +   P+F R 
Sbjct: 477 SDAQFEVSLGKWARAGSAITWADSAWGGLQAGHRTAEPA-PVFVRL 521


>gi|330723242|gb|AEC45612.1| methionyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 510

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 173/512 (33%), Positives = 277/512 (54%), Gaps = 9/512 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  Y++T I Y +   HIGH Y   +A V+ R+ +L G D    TG+DEHG KI + A+
Sbjct: 2   KKTFYVTTPIYYASGDLHIGHLYTTTLAWVIKRYKQLVGFDTKMLTGSDEHGLKIQQKAE 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  ++FVDQ  + F ++   LDI YD F RTT  +H      +++K+ +KG IYKG 
Sbjct: 62  QNKLDIQIFVDQVVKKFENLWQKLDIDYDFFSRTTSDKHKKIVAQIFEKMLEKGLIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           YSGWYS+ DE +    +        Y+    N +++ E+E YFF +  +   LLSY++ +
Sbjct: 122 YSGWYSISDEEFLTPTQAVLKNGKYYHPVSDNLLEYFEQETYFFNMKKFAPWLLSYWKEN 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P F++  + +NE+     + GL+DLS++R   +WGIK+  D ++ +YVW+DAL NYLT  
Sbjct: 182 PNFVINKKIQNELEKNFLEKGLEDLSVTRTDLEWGIKVISDQKHTIYVWLDALFNYLTAL 241

Query: 243 GYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            +    D    K+W      LH++GK+I RFH IYWP FL S ++ LP  + SHG+I+  
Sbjct: 242 NFDLENDQDYQKYWKNGDQILHIVGKEITRFHCIYWPIFLKSLDIKLPTSILSHGWIITN 301

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS GNV+DPI+++E+   + ++ F   +I  G DG +D++ L    N+ LAN  G
Sbjct: 302 EGKMSKSKGNVVDPIKLLEQYDKEVIKLFFASQIPVGSDGIFDQENLTLFYNSTLANNFG 361

Query: 360 NLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+++MI K++D  +        E D+ I            ++  N  + +A  +V 
Sbjct: 362 NLITRTITMIFKNFDRPVRYKKEELLEEDKQIFEAIIETKNNYIKHFDNYELDKAFKEVF 421

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           SL  +++ Y D  KPW   +TN DR   +L   +  I  +  LL   +   + K+  IL 
Sbjct: 422 SLSKKLNGYIDITKPWS--ETNKDRLEVILNTLINGIYAVNTLLSVCLKNTSQKVLKILK 479

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  E      ++   K   +       IF R 
Sbjct: 480 L--EKNDINQVENFSKFDNLFLDKAKVIFERM 509


>gi|262280117|ref|ZP_06057902.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262260468|gb|EEY79201.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 688

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 230/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + +SGL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPVSIANKLDEWFESGLTDWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            S   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLDGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  +    A +E    
Sbjct: 359 SKLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINSNFNNTLSAECAESE---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIASAYEAREFSMAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++   L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAEQVQSFLKL--ESFNFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|221054251|ref|XP_002261873.1| methionine--trna ligase [Plasmodium knowlesi strain H]
 gi|193808333|emb|CAQ39036.1| methionine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 885

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 183/510 (35%), Positives = 292/510 (57%), Gaps = 11/510 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK YI+TAI Y N  PHIGHAYE+++AD +AR+H+  G  V FTTG DEHG KIA  A
Sbjct: 218 KKEKFYITTAINYVNGDPHIGHAYEIVLADAIARYHKNIGRRVFFTTGADEHGMKIANQA 277

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   DQN   F+++  +L +  D ++RTT  +H    + +W K     DIY G
Sbjct: 278 ARNNLTPQELCDQNVLKFKELNKLLHVDEDYYVRTTCDKHKKIAQEIWTKCEQNEDIYLG 337

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY++R+E Y  ++E             +  ++ M+E  YFF++S YQ++L++Y   
Sbjct: 338 EYEGWYNVREETYVPENEAKLMN--YRDPLNNIKLEKMKESSYFFKMSKYQERLINYIHE 395

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P FI P ++RNE++  +K  L DLS SR  F WGI +P D +++MYVW+DAL NY ++ 
Sbjct: 396 NPHFIQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDNKHVMYVWMDALINYYSSC 455

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
             +D     K  +WPAD+H+IGKDI+ FH + +P+ L+S N+ LPK VF HGF+L   G+
Sbjct: 456 FIMDG----KEDYWPADVHLIGKDIVWFHTVIFPSILMSVNVDLPKSVFCHGFVLAGDGK 511

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P E+IE  G DA R+ +++E   G D  +D D L    N+DLA+ IGNL
Sbjct: 512 KMSKSLGNVINPFEIIETYGSDAFRFHVIKETKRGFDMRFDIDNLVDMCNSDLADTIGNL 571

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R++S+     +  IP        D          +  +  +M+   +     + +++ 
Sbjct: 572 VQRTLSLCQLSNESKIPPLFEEYNIDLPF--SLLHFINSVEFHMKTYCVQVCCEKTVNVC 629

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++++     PW+ K    ++   ++ + +E I  +A  L  F+P +A++IF  L    
Sbjct: 630 KDLNKFLTELAPWKYKNEEQNKKLHIIRIMMEAIYLIAHYLDIFIPSIASQIFKKLNTPK 689

Query: 482 ENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++          L+ G  ++   + +F +F
Sbjct: 690 KSIVDLNPWLNNLQEGAQINN-DNILFKKF 718


>gi|91786826|ref|YP_547778.1| methionyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123060257|sp|Q12F12|SYM_POLSJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91696051|gb|ABE42880.1| methionyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 689

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 153/544 (28%), Positives = 238/544 (43%), Gaps = 51/544 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +L+++TA+ Y N   HIGH  E I AD+  R+ R+ G +V F    D HG  I  AA
Sbjct: 2   SQRRLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMQGHEVNFVGADDAHGAPIMIAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           + AG T + FV   +   +   D   IS+D++  T    +H   + ++  +   G I   
Sbjct: 62  EKAGKTPQQFVADIAAGRKPYLDGFHISFDNWHSTDGPENHQLAQQIYLDLKKAGLIETK 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE--------- 162
               ++      +  D  +             G + +   A + P   +           
Sbjct: 122 TVEQFFDPDKNMFLPDRFIKGQCPKCGAKDQYGDNCEVCGAVYAPTDLINPYSALSGATP 181

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----------GLKDL 207
                E +FFRLS  +        +    +L  E  N+V  +             GL D 
Sbjct: 182 VLKSSEHFFFRLSDPRCVAFLEQWTQDG-MLQTEVANKVKEWFSPRQNVDGTTSEGLDDW 240

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHV 262
            +SR    +GI+IPD P    YVW+DA   YL +   L +  G     + AD      H 
Sbjct: 241 DISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKKGLDYDAYMADPGLEQYHF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EV 320
           IGKDI+ FH ++WPA L  +    P  VF HGF+  + GEK+SKS G  +DP++ +   +
Sbjct: 301 IGKDIITFHTLFWPAMLHFSGRKTPDNVFVHGFLTVNNGEKMSKSRGTGLDPLKYLNLGM 360

Query: 321 GVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LRY+L  +  A  +D  ++ +    RVNADL     N+ SR+   I K +DG +  
Sbjct: 361 NPEWLRYYLAAKLNARNEDIDFNPEDFMARVNADLVGKYINIASRAAGFISKRFDGRLGE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P A  ++   +L V       I+E    +   +AL +V+ L   V+ Y D  KPWEL K 
Sbjct: 421 PSADGDA---LLEVLRGASPAIQELYAEREYGKALREVMQLADRVNGYVDQNKPWELAKQ 477

Query: 440 N--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
                R   V  V +E  R L I L+  +P L  ++ D L     +  F+     L  G 
Sbjct: 478 PGMEARLLDVCTVCIEAFRLLTIYLKPVLPALGTQVEDFLKTG--SLTFRDAGASLGSGH 535

Query: 498 MLHK 501
           ++ +
Sbjct: 536 VIGE 539


>gi|162287115|ref|NP_001079838.1| methionyl-tRNA synthetase, mitochondrial precursor [Xenopus laevis]
 gi|82240391|sp|Q7T0Z0|SYMM_XENLA RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|33417075|gb|AAH55977.1| MGC68850 protein [Xenopus laevis]
          Length = 562

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 178/531 (33%), Positives = 276/531 (51%), Gaps = 26/531 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  R  LY +T I Y NA PH+GH Y  ++ADV  R+  + G++   +TGTDEHG K+ +
Sbjct: 31  VASRPHLY-TTPIFYVNAAPHLGHVYSALLADVQHRYSAMCGIESKLSTGTDEHGMKVQQ 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+  + F    S  FR + D LDISY DF+RTTE RH +     W  + ++G IY
Sbjct: 90  AASALGLDPQTFCSTVSLQFRTIFDALDISYTDFVRTTEPRHIEAVSRFWMTLEEQGYIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDK 175
           KG Y GWY   DEA+ ++ +  +  D +    +      + V W+ EE Y FRLS+ +  
Sbjct: 150 KGTYEGWYCTSDEAFLSEGQTAEHTDFEGNKIRVSLESGHQVHWVSEENYMFRLSSLRPA 209

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           LL++ ++ P    P  +        +     +S  R    WGI +P D  +++YVW+DAL
Sbjct: 210 LLNWLQTEPVHPAPFLKLVHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLDAL 269

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +         W    H++GKDILRFHAIYWPAFL++A LP P+K+  H  
Sbjct: 270 VNYLTAAGYPNPQLA----PWGPSTHLLGKDILRFHAIYWPAFLIAAGLPPPQKLLVHSH 325

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSL NV+DP + I     D LRY+L+R  A  +D  +     +  +N++LA
Sbjct: 326 WTSEGTKMSKSLKNVVDPSDCIRRYTTDGLRYYLLRHGAPERDCDFTHRTARMLLNSELA 385

Query: 356 NGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           + +G L++R  +  +              P A  +    +L     +  E+ + ++   +
Sbjct: 386 DALGGLLNRCTAPAINPMQHFPKFQYENFPVASRDQVHDLLGALQELPVEVDQWIKKFQV 445

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVP 467
           H+AL  + + V   + +F +Q PW+L++     A+   +V+Y+T+E +R  A LL   VP
Sbjct: 446 HKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYLTLEALRLYATLLHPAVP 505

Query: 468 KLANKIFDILFVADENRCFQS----LDQRLKPGFMLHKTFDP----IFPRF 510
            LA  + D L V  + R  +        R +  +   +T  P    +FPR 
Sbjct: 506 GLATVVLDRLGVPHKMRTLKKNTFLAATRGEICYFQAQTLGPDKGLLFPRL 556


>gi|332169738|gb|AEE18993.1| methionyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 695

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/545 (25%), Positives = 240/545 (44%), Gaps = 45/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M +   +  I+ A+ Y N   HIGH A   + AD+ AR+ R+ G DV F  G+DEHG  I
Sbjct: 1   MSQNPQRYTITAALPYTNGPIHIGHLAGVYVPADIYARYQRMQGADVAFICGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GVT +  VD+ +       +   I++D++ RT+ K HHDT    +K + D+G 
Sbjct: 61  TIKAKKEGVTPQDVVDKYNAIIIKSFEDFGITFDNYSRTSAKIHHDTASEFFKNMYDQGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM------- 160
             +      Y      +  D  V             G   +     HN    +       
Sbjct: 121 FIEETNEQLYDAEANQFLADRFVTGTCPKCGFEEAYGDQCESCGTSHNATDLINPKSAIT 180

Query: 161 -------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E + +F  L  Y D    +     +         +  S++  GL+  +++R  
Sbjct: 181 GAVPTLKETKHWFLPLDQYNDFFKEWIIEGHKKDWKTNVYGQCKSWIDDGLRPRAVTRD- 239

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y+++T      +G   + +  D     LH IGKD
Sbjct: 240 LDWGIPVPVEGAEGKVLYVWFDAPIGYISSTKEWAAREGKDWEPYWKDENTKLLHFIGKD 299

Query: 267 ILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VD 323
            + FH + +PA L       LP  V ++ F+  +G K+S S    +   E +EE     D
Sbjct: 300 NIVFHCLIFPAMLKGHGEYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEEFPDQQD 359

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N++L    GNL++R   +  K Y G++PTPG F
Sbjct: 360 VLRYVLTANAPESKDNDFTWKDFQTRNNSELVAIFGNLINRVTVLTHKYYGGVVPTPGTF 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D+ +L         I  +++      + A+ ++L    ++Y   ++PW+  KT+ +R
Sbjct: 420 NELDKEVLDAIKAYPAVIGSSIEKYRFRESQAEFMNLARLGNKYLADEEPWKTIKTDEER 479

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQR---LKPG 496
             TV+YV +++   LAIL +  +P  +  + +IL +     +    +  +  +   L  G
Sbjct: 480 TKTVMYVALQIATALAILSEPLLPHTSVTLKNILDLPASDVENALQWSDITSKEVLLPAG 539

Query: 497 FMLHK 501
             +++
Sbjct: 540 HTINE 544


>gi|82539458|ref|XP_724116.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478651|gb|EAA15681.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 882

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 194/511 (37%), Positives = 299/511 (58%), Gaps = 11/511 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+TAI+Y N +PHIGHAYE+I+AD +AR+HR  G D+ FTTG DEHG KIA  A
Sbjct: 216 KNDNFYITTAISYVNGEPHIGHAYEIILADAIARYHRNLGRDIFFTTGADEHGLKIANQA 275

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D N   F+ +   L  + D ++RTT   H    + +W K  + GDIY G
Sbjct: 276 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVENGDIYLG 335

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY++R+E Y  ++E             +  ++ M+E  YFFR+S YQD+LL Y   
Sbjct: 336 EYEGWYNVREETYIPENEAKLMN--YIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQYIHD 393

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P + RNE++  +K  L+DLS SR  F WGI +P+DP+++MYVW+DAL NY ++ 
Sbjct: 394 NPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFTWGIPVPNDPKHVMYVWMDALINYYSS- 452

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
                 +  K K+WPAD+H+IGKDI+ FHA+ +P  L+SAN+ LPK VFSHGF+L   G+
Sbjct: 453 --CFINNQEKVKYWPADIHIIGKDIVWFHAVIFPTILMSANIELPKCVFSHGFVLAGDGK 510

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NVIDP E+IE  G DA R+ +V+E   G D  +D D L    N+DLA+ IGNL
Sbjct: 511 KMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNLVDMCNSDLADTIGNL 570

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R++S+ +   +  IP    + + D  +       +  I   M+N  IH+   + +++ 
Sbjct: 571 VQRTLSLCILSNNAKIPPL--YDDIDIDLPFCMLHFINRIEYYMKNFHIHKFCEKTVNVC 628

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++++     PW+ K+    ++   ++ + +E I  +A  +   VP +A+ IF  L   
Sbjct: 629 KDLNKFLTDLAPWKYKEESEKNKKLHIIRLMLESIYFIAHYIDIVVPMIASNIFSQLNTP 688

Query: 481 DENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +           L+ G +++   + +F +F
Sbjct: 689 KKKIVDLNPWLNNLQEGVIINN-DNVLFKKF 718


>gi|90407939|ref|ZP_01216113.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310953|gb|EAS39064.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 680

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 134/546 (24%), Positives = 238/546 (43%), Gaps = 48/546 (8%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+ +  K+ ++ A+ Y N   H+GH  E + AD+  RF RL G +V F    D HG  I 
Sbjct: 1   MQNQDRKILVTCALPYANGPIHLGHMLEHVQADIWVRFQRLRGNNVSFICADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +         +  DIS+D++  T  + +      ++  +   G I
Sbjct: 61  LKANAMGITPEQMISEIKALHIKDFNDFDISFDNYHSTHSEENKTLSTHIYNTLHKNGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
                   +    E +  D            E   G +     A ++P + +        
Sbjct: 121 KTKTIEQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDSCGATYSPTEMINPKSAVSG 180

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E E +FF L  ++D L ++  S     L IE  N+V  + + GLK   ++R   
Sbjct: 181 ATPIMKETEHFFFDLPQFEDMLKTWTRSGA---LQIEMANKVAEWFEFGLKQWDITRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDI 267
            +G +IP+ P    YVW+DA   Y+ +   L +        ++W  +      H IGKDI
Sbjct: 238 YFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDRRDDLDFDEYWNKNSSTELYHFIGKDI 297

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  +    P  V  HG++   G K+SKS G  I     +E +  + LRY
Sbjct: 298 VNFHSLFWPAVLEGSGFRKPTAVHVHGYVTVNGAKMSKSKGTFIKASTYLEHLDPECLRY 357

Query: 328 FLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   ++     D   + D   +RVN+D+ N + NL SR+   I K Y+G +    +   +
Sbjct: 358 YYAAKLTSKIDDLDLNLDDFMQRVNSDVVNKLVNLASRTAGFIAKKYNGEL----SVKIA 413

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPD-RA 444
           + ++        + I    + +   RA+ ++++L  + ++Y D + PW L K  + D   
Sbjct: 414 EPALYQEFIDAGESIASLFEKREFARAIREIMALADKANKYIDEKAPWALAKEADKDIEV 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             +  + + + R L   L+  +PKL  +  + L    E   ++ +   L  G  ++K F 
Sbjct: 474 QEICSMGINLFRVLMTYLKPVMPKLTARSEEFL---AETLDWEVIKTPL-SGHKINK-FK 528

Query: 505 PIFPRF 510
            +F R 
Sbjct: 529 ALFQRI 534


>gi|21358483|ref|NP_650348.1| Methionyl-tRNA synthetase [Drosophila melanogaster]
 gi|75026854|sp|Q9VFL5|SYMM_DROME RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|17861592|gb|AAL39273.1| GH13807p [Drosophila melanogaster]
 gi|23171238|gb|AAF55037.2| Methionyl-tRNA synthetase [Drosophila melanogaster]
 gi|220945160|gb|ACL85123.1| Aats-met-PA [synthetic construct]
 gi|220954980|gb|ACL90033.1| Aats-met-PA [synthetic construct]
          Length = 582

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 174/502 (34%), Positives = 268/502 (53%), Gaps = 23/502 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL--DVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV    + D  S+ +R++     I  DDFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKT- 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              + P +    ++  +   L D+S+SR      W I +PDD    +YVW+DAL NYL++
Sbjct: 200 EARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D      +  WP    VIGKDIL+FH IYW AFLL+A L  P +++ H      G+
Sbjct: 260 VGYPDE---KFSAHWPPAQQVIGKDILKFHGIYWTAFLLAAGLEPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P+P A   +D        + +     ++ +    + +    H  
Sbjct: 377 LSRASAKSL-NPGQIYPSPSAEHLADLLRSLDVAKRLQDSLLQLSERCESHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ  +P+L
Sbjct: 436 ADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           AN++ D L V    R +  L +
Sbjct: 496 ANRLLDKLSVPTAQRGWNYLAE 517


>gi|107103015|ref|ZP_01366933.1| hypothetical protein PaerPA_01004084 [Pseudomonas aeruginosa PACS2]
          Length = 677

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 230/545 (42%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRDAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + RQL I L+  +PKLA      L VA     +    Q L     L+  F P
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP--LTWAD-HQTLLANHQLN-PFQP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|261855653|ref|YP_003262936.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836122|gb|ACX95889.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 685

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 239/545 (43%), Gaps = 47/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++   ++ +++A+ Y N   H+GH  E I  D+  R  +L G +  +    D HG  I  
Sbjct: 3   LQAPRRILVTSALPYANGPLHLGHIIETIQTDIWVRAQKLFGNECRYLCADDTHGTPIML 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +  + +   + +       I +D F  T  + +      ++K++  +G I 
Sbjct: 63  KAQQEGITPEELITRIGNSHKADFADFMIGFDIFHSTHSEENRRMASEIFKRLDARGLIS 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
           +      Y    E +  D  +             G + +   A ++P +           
Sbjct: 123 RKTIKQAYDPEKEMFLPDRFIKGECPKCGALDQYGDNCEKCGATYSPTELKNPRSVLSGA 182

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E YFF L   QD+L  +     + + P  R  ++  +  SGL+   +SR    
Sbjct: 183 TPVERDSEHYFFDLPKMQDRLKQWLS--EDRVQPAIRA-KLQEWFDSGLQAWDISRDAPY 239

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y+       ++      ++W  +     +H IGKDI  
Sbjct: 240 FGFEIPGAPGKFFYVWLDAPIGYIGAFLKLAESTGLDFDEYWGENAQTELIHFIGKDIAY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L+ A L  P  V++HGF+   GEK+SKS G  I     +  +   ALRY+ 
Sbjct: 300 FHTLFWPATLMGAGLRTPTAVYAHGFLTLNGEKMSKSRGTFIQARTYLNHLDPQALRYYF 359

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D     +  + RVN+DL   + N+ SR    I K ++  +    A +E  E
Sbjct: 360 AAKLSSGIDDIDLSLEDFRLRVNSDLVGKVVNIASRCAGFIHKQFNSELSAELAHSELHE 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +++      + I+   + +   +A+ ++++L   V++Y D +KPW + K+ PD  + V 
Sbjct: 420 QLVA----AAESIKTRYERRETGQAMREIMALADLVNQYIDEKKPWAMAKS-PDSLAAVQ 474

Query: 449 YVT---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V    +   R L   L   +P ++ K    L +A+    +  L + +  G  ++  F+P
Sbjct: 475 GVCTDGLNAFRILMTYLTPVLPAMSAKAAQFLNLAEFR--WSDLARPMV-GHKINA-FEP 530

Query: 506 IFPRF 510
           +  R 
Sbjct: 531 LMTRI 535


>gi|223558006|gb|ACM91012.1| methionyl-tRNA synthetase [uncultured bacterium URE4]
          Length = 724

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 130/515 (25%), Positives = 228/515 (44%), Gaps = 35/515 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++ A+ Y N   HIGH A   I  D+  R+ RL G DV+F  G+DEHG  I 
Sbjct: 1   MNDHKRTLVTCALPYANGPVHIGHLAGAYIPGDIYVRYLRLRGEDVVFVCGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VDQ  +  +D    L I++D + RTT   H  T    ++K+ D    
Sbjct: 61  IKARAQGVTPQDIVDQYHQVMKDAFTGLGINFDIYSRTTSDVHDKTASEFFRKLYDNDKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------ 162
                  +Y    + +  D  +             G   +   +  +P + ++       
Sbjct: 121 ITKETEQYYDEEAKTFLADRYIVGTCPKCGNPGAYGDQCEKCGSTLSPEELIDPRSALSG 180

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + ++  L  Y+  L  +     +         +  S++  GL+  ++SR   
Sbjct: 181 STPKKVKTKHWYLPLDQYEPWLRDWILEQHKEWK-TNVYGQCKSWLDGGLQPRAVSRD-L 238

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRF 270
           DWG+ +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD + F
Sbjct: 239 DWGVPVPVEGAEGKVLYVWFDAPIGYISNTKELLPESWEKWWKDPETRLVHFIGKDNIVF 298

Query: 271 HAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRY 327
           H I +P+      +  LP+ V ++ F+  +G+KIS S    +   E  E+       LRY
Sbjct: 299 HCIVFPSMLKAYGDFVLPENVPANEFLNLEGDKISTSRNWAVWVHEYEEQFPGQEDVLRY 358

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L       KD  +     ++R N++L    GN V+R+V +  K +DG++P        D
Sbjct: 359 VLTANAPETKDNDFTWKDFQQRNNSELVAVFGNFVNRAVVLTHKYFDGVVPENRKPEPID 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              L+      + + + ++      AL + +++    ++Y    +PW++ KT+ DR +++
Sbjct: 419 AETLASIVPCKEALEKYVETFHFREALKEAMNIARIGNKYISDMEPWKVAKTDMDRTASI 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           LY  +++   LAI  + F P  A K+ DIL V  +
Sbjct: 479 LYTCLQICADLAIAFEPFTPFSAGKLRDILRVGID 513


>gi|308163205|gb|EFO65564.1| Methionyl-tRNA synthetase [Giardia lamblia P15]
          Length = 572

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 187/562 (33%), Positives = 291/562 (51%), Gaps = 54/562 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ +E +Y++T I Y N +PHIGH +  ++AD L RF +L G +    TGTDEHGQK+ +
Sbjct: 1   MRTKE-VYLTTPIYYVNGKPHIGHVFTTLLADTLKRFRKLQGFETYLMTGTDEHGQKVQQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFR-DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +A+  G+  + + D  ++ F     +   +  D F+RTT  +H +    LW+K+   G I
Sbjct: 60  SAEKLGLQPQQWCDNMAKTFETYFLENFGLCPDFFMRTTMSKHVEMATKLWEKLRAVGLI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-----PVQWMEEEGYFFRLSAYQD 174
           YK  Y GWY + DEA+  +  +  G D Q    + +     P  ++ EE Y F+LS++Q+
Sbjct: 120 YKDKYEGWYCIADEAFVTETNLKDGVDAQGKPCKVSTESGQPCVFLSEENYKFKLSSFQE 179

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWI 232
            LL +Y  +PE I+P  R+ E++SF++SGL D+S+SR      WGI +P D  ++MYVWI
Sbjct: 180 PLLKFYRDNPEIIIPAFRQAEIVSFIQSGLHDISISRSKDKISWGIPVPGDSDHVMYVWI 239

Query: 233 DALTNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           DALT YLT      NPDG+ + + WPAD+  +GKDI RFH +YW AFL+ A +P P++ F
Sbjct: 240 DALTIYLTAADSTINPDGTFSSRLWPADVQFLGKDIARFHCVYWLAFLMGAGIPCPRRFF 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            HG+     +KI KSLGN +DP  ++E  G+D ++YF++RE +   D    ++ +  R  
Sbjct: 300 IHGWWTINQQKIGKSLGNALDPTSLVETYGLDGIKYFMLREGSPANDPSITEELISMRTE 359

Query: 352 ADLANGIGNLVSRSV--------------------------SMILKDYDGMIPTPGAFTE 385
           +DLAN +GNL  R                            S+ +K+    I        
Sbjct: 360 SDLANVLGNLTMRCTADSLLPDRIWTDPSKLFEGVSFTQIRSLWMKNRKSSIAELMPADV 419

Query: 386 SDES-------------ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            +               +L     + +E+   M N  I   L+++  ++  ++ Y     
Sbjct: 420 GERENISSIIRIDDISDLLDKGLVIYEEVTGLMNNVDIPGTLSKIFEILVGINNYIQLTM 479

Query: 433 PWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-- 488
           PW L K    +     V+Y   E++R  A LL  F+P+ A  I D L V  E+R  Q   
Sbjct: 480 PWVLIKKEETKNGHEFVMYCATELLRICATLLLPFIPQKAPLILDQLGVPSEDRAIQKDV 539

Query: 489 -LDQRLKPGFMLHKTFDPIFPR 509
                + PG  L +   P+FP+
Sbjct: 540 LTIGYVTPGLALGEKLPPLFPK 561


>gi|15598678|ref|NP_252172.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|25009398|sp|Q9HYC7|SYM_PSEAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|9949627|gb|AAG06870.1|AE004769_3 methionyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 677

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 130/545 (23%), Positives = 230/545 (42%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRDAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + RQL I L+  +PKLA      L VA     +    Q L     L+  F P
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP--LTWAD-HQTLLANHQLN-PFQP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|109940177|sp|Q9ZTS1|SYM_ORYSJ RecName: Full=Probable methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54290977|dbj|BAD61657.1| methionyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|222635658|gb|EEE65790.1| hypothetical protein OsJ_21495 [Oryza sativa Japonica Group]
          Length = 801

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 114/559 (20%), Positives = 233/559 (41%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +V++  GTDE+G      
Sbjct: 14  GRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETK 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + +
Sbjct: 74  AMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTE 133

Query: 122 GCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    + +  D              E  +G   +  +   NP + ++ +     
Sbjct: 134 NTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 193

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKT 213
                R + +    L          +       + S         ++K GLK   ++R  
Sbjct: 194 NTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD- 252

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 253 LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKD-PDNVELFQFMGKDNV 311

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +  +  +  +  
Sbjct: 312 PFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVW 371

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD ++P   
Sbjct: 372 RYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAP 431

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                   ++++   ++ +++  E M+   + + L   + + S+ + Y    + W+L K 
Sbjct: 432 NAESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKE 491

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLK---- 494
           +P   + V+  +V V+  LA LL+ F+P  +N++   L +  +E+  F      +     
Sbjct: 492 DPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKR 551

Query: 495 ------PGFMLHKTFDPIF 507
                  G  + K   P+F
Sbjct: 552 PWDFVSAGHKIGKP-SPLF 569


>gi|195109831|ref|XP_001999485.1| GI24536 [Drosophila mojavensis]
 gi|193916079|gb|EDW14946.1| GI24536 [Drosophila mojavensis]
          Length = 579

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 176/539 (32%), Positives = 273/539 (50%), Gaps = 34/539 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKI 58
           ++ R   Y++T I Y NA PHIGH Y  +IAD   R+HRL   D  V   TGTDEHG KI
Sbjct: 14  VRCRSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYHRLRYPDTEVRLCTGTDEHGTKI 73

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +AA    V    + D+ S  +R++     I YDDFIRTTE+RH       W ++  +G 
Sbjct: 74  QQAAAAHEVPVGQYCDEISARYREVFKAARIEYDDFIRTTEQRHKLAVSDFWHRLQSRGY 133

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           IY   YSGWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  
Sbjct: 134 IYSAAYSGWYCVSDETFLTDSQLRLDEASGARYSLESGHPVEWTEETNYMFRLSQFQD-D 192

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDA 234
           + ++      I P +    ++  +   L D+S+SR      W I +P+D    +YVW+DA
Sbjct: 193 VRHWVQQEARIRPAKFEKILLDTLSEPLPDVSISRPANRVHWAIPVPNDETQTVYVWLDA 252

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYL++ GY +    +    WP    VIGKDIL+FH IYWPAFLL+A L  P+++  H 
Sbjct: 253 LINYLSSLGYPNEQYLA---HWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPRQLHVHS 309

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS  NV+DP+E  ++  ++ LRYFL+RE     DG +      + +N++L
Sbjct: 310 HWTVDGQKMSKSKHNVVDPVEAAKQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSEL 369

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFT--------ESDESILSVCSRVLQEIRENMQ 406
           A+ +GNL+SR+ +  L +   M P P            ++ + +      +     ++ +
Sbjct: 370 ADTLGNLLSRACAKSL-NPHQMYPEPHVEHLSQLLQHLDAGKRLQEALFHLAGRCEQHYE 428

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILL 462
               H      I+ +   + +F+  KPWELK      N  R  T++ +T++ +R   I+L
Sbjct: 429 GNHFHLVADTAIAALHAANNFFECAKPWELKAGGSSPNAQRLQTIIAMTMDALRLCGIVL 488

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP----------IFPRFL 511
           Q  +P+L +++ D L V    R ++ L +            +           +F R +
Sbjct: 489 QPMMPQLTSRLLDKLNVPIAQRSWRHLGESFAAATP-GNGPESHQLDEHSSALLFQRIV 546


>gi|116051500|ref|YP_789665.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388000|ref|ZP_06877475.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313108844|ref|ZP_07794829.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122260639|sp|Q02QX1|SYM_PSEAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115586721|gb|ABJ12736.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881331|gb|EFQ39925.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 678

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 131/546 (23%), Positives = 230/546 (42%), Gaps = 48/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRDAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFD 504
            V  + + + RQL I L+  +PKLA      L VA         D R L     L+  F 
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP----LTWADHRTLLANHQLN-PFQ 528

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 529 PLMTRI 534


>gi|298377830|ref|ZP_06987780.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265276|gb|EFI06939.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 679

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 234/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLREWILEGHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K  + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGATDLLEAGHQLGKA-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|284007101|emb|CBA72376.1| methionyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 675

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 133/541 (24%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGKQVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + ++  +       ISYD++  T    +      ++  +   G I     
Sbjct: 66  LGITPEEMISKVNQEHQHDLADFAISYDNYHSTHSVENKTLSEQIYLTLKKNGFIQSKTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
           S  Y  + E +  D  V             G + +   A +NP               + 
Sbjct: 126 SQLYDPKQEMFLPDRFVKGSCPKCQAADQYGDNCEVCGATYNPTELINPHSVISGATPEM 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+   L ++  S     L  +  N++  + ++GL+   ++R    +G +
Sbjct: 186 RETEHFFFDLPAFSKMLQTWTRSGA---LQPQVANKMQEWFEAGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADL-----HVIGKDILRFHA 272
           IP++P    YVW+DA   Y+ T   L    PD   A FW  D      H IGKDI+ FH+
Sbjct: 243 IPNEPGKYFYVWLDAPIGYMGTFKNLCEKQPDIDFASFWQQDFTADLYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG+I   G K+SKS G  I     ++++  D LRY+   +
Sbjct: 303 LFWPAILEGSGYRKPTNIFVHGYITVNGAKMSKSRGTFITARAYLDQLDADCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVN+D+ N + NL +R+   I K +   + +  A  E  +  +
Sbjct: 363 LSSRIDDIDLNLEDFVQRVNSDIVNKVVNLAARNAGFINKRFHNKLSSRLAAPELYQQFI 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +  +    +I +    +  ++A+ +++ L    +RY D Q PW + K          +  
Sbjct: 423 AAAN----KIGQEFCQREYNKAIREIMLLADLANRYIDEQAPWVVAKQEDREQDLHDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L  +    L +   +  +  ++  L     +   F  +F R
Sbjct: 479 MGINLFRVLMTYLKPILPGLTGRTEAFLNI---SLNWDDINNPLL-NHEIT-PFKTLFQR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|254481396|ref|ZP_05094641.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038559|gb|EEB79221.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 704

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 127/540 (23%), Positives = 229/540 (42%), Gaps = 46/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E +  D+  RF R  G D L+    D HG  I  AA+ 
Sbjct: 29  RKILVTSALPYANGPLHLGHMLEQVQTDIWVRFQRSRGHDCLYVCADDAHGTAIMLAAEK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  ++         +    I + +F  T  + +      ++ ++     I     
Sbjct: 89  LGITPEQHIESMRERHMHDSSGFLIDFANFYSTHTEENRKWSEDIYGRLKANNHIASRTI 148

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------- 160
           +  +    E +  D            E   G + +   A ++P   +             
Sbjct: 149 TQAFDPEKELFLADRFIKGTCPRCKAEDQYGDNCESCGATYSPSDLIDPVSAISGATPVD 208

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E +  FF+L  ++  L  + +S     L  +  N++  +  +GL++  +SR    +G +
Sbjct: 209 KESKHLFFKLPEFEAMLKQWLDSDT---LQPQVANKLREWTDAGLQEWDISRDAPYFGFE 265

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRFHAI 273
           IP +     YVW+DA   Y+ +        G     +          H IGKDI+ FH +
Sbjct: 266 IPGETGKYFYVWLDAPIGYIASFDNYCQRTGHNFDEYIEPGGDTELYHFIGKDIINFHGL 325

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L SA L  P  +F+HGF+   G K+SKS G  I+    +E +  + LRY+   ++
Sbjct: 326 FWPAMLHSAGLRTPTAIFAHGFLTVNGTKMSKSRGTFINASTYLEHLDAEYLRYYYAAKL 385

Query: 334 A-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
           +    D   + D   +RVN+D+   + N+ SR    + K +D  +    A  +    +L+
Sbjct: 386 SNSVDDIDLNTDDFTQRVNSDVVGKVVNIASRCAGFLRKGFDNTLSPECAEPQ----LLA 441

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYV 450
                   I    + +  ++A+ ++I+L    ++Y D +KPW L K    +A    V  V
Sbjct: 442 DFIAAGDNIAALYEQREFNKAIREIIALADRANQYIDDKKPWVLVKEEGQKAEVHAVCSV 501

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + R L   L+  +P +A K    L +   +  + +L+  L     L K F P+  R 
Sbjct: 502 GINLFRVLMTYLKPVLPAMAAKSEAFLNI---SLDWTALESPLV-NHTLSK-FKPLIQRI 556


>gi|218890270|ref|YP_002439134.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226695283|sp|B7UWJ8|SYM_PSEA8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218770493|emb|CAW26258.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 677

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 131/546 (23%), Positives = 230/546 (42%), Gaps = 48/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRDAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSSAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFD 504
            V  + + + RQL I L+  +PKLA      L VA         D R L     L+  F 
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP----LTWADHRTLLANHQLN-PFQ 528

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 529 PLMTRI 534


>gi|258647690|ref|ZP_05735159.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852523|gb|EEX72392.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 680

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 131/547 (23%), Positives = 231/547 (42%), Gaps = 42/547 (7%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ++   +  I+ A+ Y N   HIGH A   I +D+ AR+ RL    VLF  G+DEHG  
Sbjct: 1   MTQKTFNRTLITAALPYANGGVHIGHLAGVYIPSDIYARYLRLRNKPVLFICGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+    T +  VD+  +  +D  +   IS+D + RTT   H  T    ++ + DKG
Sbjct: 61  ITIRARREHCTPQDVVDRYHKLIKDSFEAFGISFDIYSRTTSAVHEKTATEFFRTLYDKG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
           +  +     +Y    + +  D  +             G   +      +P++ +      
Sbjct: 121 EFIEKESEQYYDEEAKTFLADRYITGECPHCHKPGAYGDQCENCGTALSPLELINPQSAI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L  +Q   L  +              +  S+   GL+  ++SR 
Sbjct: 181 SGSKPVLRTTKHWYLPLDKHQPW-LEKWILGEHADWRSNVIGQCKSWFDMGLQPRAVSRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKD 266
             DWGI +P +     ++YVW DA   Y++ T  L   D      W +D    +H IGKD
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTRELLPNDWETW--WKSDDTRLVHFIGKD 296

Query: 267 ILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VD 323
            + FH I +PA         LP  V S+ F+  +  KIS S    +   E + +     D
Sbjct: 297 NIVFHCIVFPAMLKAHGEYVLPDNVPSNEFLNLEDRKISTSRNWAVWLHEYLTDFPDKQD 356

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N +L    GN V+R++ +  K Y G +P  G  
Sbjct: 357 VLRYVLTANAPETKDNNFTWKDFQARNNNELVAVYGNFVNRALVLTHKYYGGEVPACGTL 416

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
              DE+ ++    V  ++   + +     A  + ++L    ++Y    +PW++ KT+P+R
Sbjct: 417 LPEDEATIAEFKDVKDKVEYLLDHFRFRDAQKEAMNLARIGNKYLTDAEPWKVIKTDPER 476

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
             T+LY+ ++++  LA     F+P  + ++  +L +   +         L  G  + +  
Sbjct: 477 VKTILYIALQLVANLATAFAPFLPFSSERLRRMLKLQTLDWSRLGHTDLLPAGHQIDQA- 535

Query: 504 DPIFPRF 510
           + +F + 
Sbjct: 536 ELLFEKI 542


>gi|260551003|ref|ZP_05825208.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405951|gb|EEW99438.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 688

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFSEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A +E    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAECAESE---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I +  + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAKAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAKQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|92114242|ref|YP_574170.1| methionyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123084023|sp|Q1QVN7|SYM_CHRSD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91797332|gb|ABE59471.1| methionyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 681

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 128/540 (23%), Positives = 225/540 (41%), Gaps = 45/540 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I   A+
Sbjct: 8   KRKILVTSALPYANGSIHLGHLLEYIQTDIWVRFQKSRGHECHYVCADDAHGTAIMLRAE 67

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  + + S   +       +++D++  T  + +      ++  + D G I    
Sbjct: 68  QEGITPEQLISKVSAEHQADFARFGVAFDNYYSTHSEENRQHSERIYTALRDAGHISTRD 127

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE---------- 162
               Y      +  D  +             G + +   A + P + ++           
Sbjct: 128 IEQMYDPVKGLFLADRFIKGTCPKCGAGDQYGDNCEACGATYTPAELIDPVSAISGATPE 187

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +FF+L  + D +  + +      +  + RN+++ + +SG  +  +SR    +G 
Sbjct: 188 VRSSTHFFFKLPDFADFMQGWIDGG---HVQPQIRNKLLEWFESGFNEWDISRDAPYFGF 244

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IPD P    YVW+DA   YL +     +        +W  D      H IGKDI+ FHA
Sbjct: 245 EIPDAPGKYFYVWLDAPIGYLASFQNLCEREGIDFDSYWRRDSDAEVYHFIGKDIVYFHA 304

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A L  P  V  HGF+   G K+SKS G  I      E +  + LRY+   +
Sbjct: 305 LFWPAMLEGAGLRTPTGVNCHGFVTVNGAKMSKSRGTFIKAQTYAEYLNPEYLRYYFAAK 364

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   + +    RVNADL   + N+ SR    + K   G +    A  E    ++
Sbjct: 365 LTAGVDDLDLNLEDFASRVNADLVGKVVNIASRCAGFVKKLGAGRLAAHCAEPE----LV 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLY 449
           +      + I  + + +   RA+ +V+ L  E + Y   + PW L K          +  
Sbjct: 421 TRFVEAGEAIAADYEAREFARAMRKVMDLADEANAYIADKAPWVLAKEEGREQEVLDICS 480

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R L + LQ  VP +A +  D L +  E+  ++S    L+    + K F P+  R
Sbjct: 481 VGINLFRILMVYLQPVVPAMAEQARDFLQI--ESLDWESRRTLLE-DHAIAK-FKPLMTR 536


>gi|184157057|ref|YP_001845396.1| methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|294840441|ref|ZP_06785124.1| methionyl-tRNA synthetase [Acinetobacter sp. 6014059]
 gi|183208651|gb|ACC56049.1| Methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|322506956|gb|ADX02410.1| metG [Acinetobacter baumannii 1656-2]
 gi|323516823|gb|ADX91204.1| methionyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 687

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESD---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|169797030|ref|YP_001714823.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213156565|ref|YP_002318226.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215484490|ref|YP_002326725.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
           [Acinetobacter baumannii AB307-0294]
 gi|260555678|ref|ZP_05827898.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|294836744|ref|ZP_06781427.1| methionyl-tRNA synthetase [Acinetobacter sp. 6013113]
 gi|294859425|ref|ZP_06797194.1| methionyl-tRNA synthetase [Acinetobacter sp. 6013150]
 gi|301347637|ref|ZP_07228378.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301513326|ref|ZP_07238563.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301595850|ref|ZP_07240858.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169149957|emb|CAM87851.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213055725|gb|ACJ40627.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987234|gb|ACJ57533.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
           [Acinetobacter baumannii AB307-0294]
 gi|260410589|gb|EEX03887.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 687

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESD---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|170717858|ref|YP_001784916.1| methionyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083261|sp|B0UV72|SYM_HAES2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|168825987|gb|ACA31358.1| methionyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 683

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 138/546 (25%), Positives = 237/546 (43%), Gaps = 51/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   
Sbjct: 3   TNSRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV  +  +    +      +  +IS+D++  T    + +    ++ K++  G I  
Sbjct: 63  ADQMGVKPEQLIADVQQKHMADFNGFNISFDNYHSTHSDENRELVEAIYHKLTQNGFIKT 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
              S  +      +  D            E   G + +  +A ++P++ +          
Sbjct: 123 RTISQLFDPEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELISPRSTVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L A+   L  +  S     L  E  N++  + ++GL+   +SR    +
Sbjct: 183 PVLKESEHFFFDLPAFGAMLTEWIRSGS---LQQEVANKMQEWFEAGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILR 269
           G KIP+      YVW+DA   Y+ +   L           FW  +      H IGKDI+ 
Sbjct: 240 GFKIPNTDNKYFYVWLDAPIGYMASFKNLCGKKSGIDFDSFWSKESHAELYHFIGKDIMY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++     D   + D   +RVN DL N + NL SR+ S I K +DG +         D+
Sbjct: 360 AAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKLANK----LDDK 415

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
            +        + I +  +N+   +A+ ++++L  + ++Y D + PW + K     D    
Sbjct: 416 MLFDEFIAQSELIADYYENREFGKAIREIMALTDKANKYVDEKAPWVIAKDESRTDELQQ 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFD 504
           V  + +E+ R L   L+  +P LA +    L   +  EN     LD ++ P       F 
Sbjct: 476 VCSMGIELFRVLIGYLKPVLPNLAARAEAFLNTQLTWENVASPLLDHQIAP-------FK 528

Query: 505 PIFPRF 510
           P+F R 
Sbjct: 529 PLFSRL 534


>gi|152986766|ref|YP_001347028.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|187647743|sp|A6V1U3|SYM_PSEA7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150961924|gb|ABR83949.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 679

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 129/545 (23%), Positives = 230/545 (42%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ + G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLREAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPDKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFRNLCARRPELDFDAFWGKDSGAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + RQL I L+  +PKLA      L VA     +    Q L     L+  F P
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP--LTWAD-HQTLLANHQLN-PFQP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|212211972|ref|YP_002302908.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064876|sp|B6J3N7|SYM_COXB2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|212010382|gb|ACJ17763.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 546

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 138/543 (25%), Positives = 227/543 (41%), Gaps = 42/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   
Sbjct: 3   TEKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMIT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  V +  +          I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 63  AQKQGLPPEALVAKMHKEHARDLGGFLIEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  Y    E +  D  +             G   +   A ++P +            
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E+    F  S  +   L         + P +  N++  +    LK   +SR    +G 
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGHLQP-QVANKLKEWFSEDLKPWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYL-------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           +IP       YVW+DA   Y+            ++     K        H +GKDI+ FH
Sbjct: 242 EIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 ALFWPAMLSGAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYYAA 361

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  A  +D   + D   +RVNADL     NL SR    I K++ G +       E D  +
Sbjct: 362 KLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLAN--ELPELD--L 417

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
                +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K      +   V 
Sbjct: 418 YESFLQTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQAVC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + + L   L+  +P  A K+   L   + N  F +L   L     ++  F+P+  
Sbjct: 478 TQGLNLFKILTTYLKPILPVTAKKVEQFLNCDELN--FANLKTPLL-DHSVN-PFEPLMQ 533

Query: 509 RFL 511
           R L
Sbjct: 534 RLL 536


>gi|239501264|ref|ZP_04660574.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 687

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESD---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|73668089|ref|YP_304104.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729563|sp|Q46F18|SYM_METBF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72395251|gb|AAZ69524.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 710

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 134/539 (24%), Positives = 233/539 (43%), Gaps = 42/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N + HIGH    + AD+ AR  R +G DV F  G+D HG  I   A+ 
Sbjct: 7   KPVLVTCGLPYANGKAHIGHLRTYVPADIYARSLRKEGRDVTFVCGSDTHGTPIVVNAEE 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  V+   ++F +    L + +D F  T +  +H+    +  ++ +KG +Y    
Sbjct: 67  LGITPKELVEVYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEKGYVYPKTI 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y  +   +  D  V                                       P ++
Sbjct: 127 EIAYCPKCNRFLPDRYVEGSCPHCGEIARGDECDQGCGKHLEPGELLNPVCTICGGPAEY 186

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            ++E +FF+LS + D L+ Y  +  +    I  RN  + +VK GL D  ++R   +WG+K
Sbjct: 187 RQQEHFFFKLSEFSDYLMDYLSN--DLGGTINARNYALGWVKQGLTDWCITR-NLEWGVK 243

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T  +      S  KFW  D   +H IG DI   H I+W
Sbjct: 244 FPGHDDLVVYVWVDAPIGYIAFTEEWAAKAGDSWEKFWKNDGEIVHFIGGDITYHHCIFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A+  +P  V + G +  + +K SKS GNV+   E  +      D LRY+L    
Sbjct: 304 PAMLKGADYSVPTAVVASGMVKIEDKKFSKSRGNVVWVGEDYLSHGFHPDLLRYYLASYT 363

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  K+  +    L++++N +L + +GN + R++    K+Y  +        E +  +   
Sbjct: 364 SHTKELNFSWRVLQEKINTELVSVLGNFLYRTMLFAFKNYGEVPS-----GELEPEVREE 418

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + L+E++  M      +A+   +SL S  + YF + +PW L K +      VLY  + 
Sbjct: 419 IEKALKEVKAAMAEYEFKKAVDSAMSLASFGNTYFQSHEPWNLIKQDKAACGQVLYNCLH 478

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + L ++ +   P      +  L    +     +      LK G  L K    +F + 
Sbjct: 479 LAKALCLIFEPVTPGSMETAWKELGQEGDLHTTLYADALVPLKAGTKLAKP-KILFTKL 536


>gi|218198281|gb|EEC80708.1| hypothetical protein OsI_23153 [Oryza sativa Indica Group]
          Length = 804

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 114/559 (20%), Positives = 232/559 (41%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +V++  GTDE+G      
Sbjct: 17  GRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETK 76

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + +
Sbjct: 77  AMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTE 136

Query: 122 GCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    + +  D              E  +G   +  +   NP + ++ +     
Sbjct: 137 NTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 196

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKT 213
                R + +    L          +       + S         ++K GLK   ++R  
Sbjct: 197 NTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD- 255

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 256 LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKD-PDNVELFQFMGKDNV 314

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +  +  +  +  
Sbjct: 315 PFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVW 374

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD ++P   
Sbjct: 375 RYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAP 434

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                   +++    ++ +++  E M+   + + L   + + S+ + Y    + W+L K 
Sbjct: 435 NAESHPLTKALAEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKE 494

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLK---- 494
           +P   + V+  +V V+  LA LL+ F+P  +N++   L +  +E+  F      +     
Sbjct: 495 DPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKR 554

Query: 495 ------PGFMLHKTFDPIF 507
                  G  + K   P+F
Sbjct: 555 PWDFVSAGHKIGKP-SPLF 572


>gi|193076558|gb|ABO11218.2| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 687

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESD---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|4091008|gb|AAC99620.1| methionyl-tRNA synthetase [Oryza sativa]
          Length = 804

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 114/559 (20%), Positives = 232/559 (41%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +V++  GTDE+G      
Sbjct: 17  GRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETK 76

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + +
Sbjct: 77  AMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTE 136

Query: 122 GCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    + +  D              E  +G   +  +   NP + ++ +     
Sbjct: 137 NTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 196

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKT 213
                R + +    L          +       + S         ++K GLK   ++R  
Sbjct: 197 NTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD- 255

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 256 LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKD-PDNVELFQFMGKDNV 314

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +  +  +  +  
Sbjct: 315 PFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVW 374

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD ++P   
Sbjct: 375 RYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAP 434

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                   +++    ++ +++  E M+   + + L   + + S+ + Y    + W+L K 
Sbjct: 435 NAESHPLTKALAEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKE 494

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLK---- 494
           +P   + V+  +V V+  LA LL+ F+P  +N++   L +  +E+  F      +     
Sbjct: 495 DPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKR 554

Query: 495 ------PGFMLHKTFDPIF 507
                  G  + K   P+F
Sbjct: 555 PWDFVSAGHKIGKP-SPLF 572


>gi|195570957|ref|XP_002103470.1| GD20436 [Drosophila simulans]
 gi|194199397|gb|EDX12973.1| GD20436 [Drosophila simulans]
          Length = 582

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 182/536 (33%), Positives = 277/536 (51%), Gaps = 37/536 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL--DVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV    + D  S+ +R++     I  DDFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKT- 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +PDD    +YVW+DAL NYL++
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D      +  WP    VIGKDIL+FH IYWPAFLL+A L  P +++ H      G+
Sbjct: 260 VGYPDE---KFSVHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P+  A   +D        + +     ++ +    + +    H  
Sbjct: 377 LSRASAKSL-NPGQIYPSTSAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ  +P+L
Sbjct: 436 ADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQRLK---------PGFMLHKTFDP-----IFPRFL 511
           AN++ D L V    R +  L +            PGF   +  D      +F R L
Sbjct: 496 ANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSHPGFGESRQLDGQTSALLFQRIL 551


>gi|195329048|ref|XP_002031223.1| GM25865 [Drosophila sechellia]
 gi|194120166|gb|EDW42209.1| GM25865 [Drosophila sechellia]
          Length = 582

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 182/536 (33%), Positives = 276/536 (51%), Gaps = 37/536 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL--DVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV    + D  S+ +R++     I  DDFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GVPVAKYCDDISQRYREVFSSASIQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD +  + ++ 
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKT- 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +PDD    +YVW+DAL NYL++
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D      +  WP    VIGKDIL+FH IYWPAFLL+A L  P +++ H      G+
Sbjct: 260 VGYPDE---KFSVHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPLKAAQQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P+  A   +D        + +     ++ +    + +    H  
Sbjct: 377 LSRASAKSL-NPGQIYPSTSAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ KPW LK   PD    R  T++ +T+  +R   I+LQ  +P+L
Sbjct: 436 ADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMNALRLSGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQRLK---------PGFMLHKTFDP-----IFPRFL 511
           AN++ D L V    R +  L +            PGF   +  D      +F R L
Sbjct: 496 ANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSNPGFGESRQLDGQTSALLFQRIL 551


>gi|170726330|ref|YP_001760356.1| methionyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|226710923|sp|B1KQM2|SYM_SHEWM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169811677|gb|ACA86261.1| methionyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 688

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q +R  +      +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 64  QQMGIEPEEMIAQVNREHQQDFADFNIQFDNFHSTHSVENRELSSDIYLKLRDAGFIKTR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +      +  D            E   G +     A +NP               
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYNPTDLINPKSAVSGATP 183

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L A++  L  +  S     +  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPAFETMLSEWTRSGA---IQDEIANKLGEWFEQGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDRREDLNFDDFWAKDSSAEVYHFIGKDIVNF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A    P  VF+HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGFRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D S
Sbjct: 361 AKLSGRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKV-----ADTS 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +          I E  +++   +A+ ++++L    + Y     PW+L K     + A  V
Sbjct: 416 LEQTFLGKQTLIAELYESREFGKAMREIMALADLANAYVADAAPWQLIKDEAKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA+ +   L        + +L+  L  G  + K F  + 
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLADDVEAFLQFP---LTWDNLNADL-AGHEIAK-FKALM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|325121110|gb|ADY80633.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 688

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 232/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFSEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++         PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A TE    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSADCAETE---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAKQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|113461322|ref|YP_719391.1| methionyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031364|sp|Q0I3W7|SYM_HAES1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|112823365|gb|ABI25454.1| methionyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 683

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 138/546 (25%), Positives = 236/546 (43%), Gaps = 51/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               ++ ++ A+ Y N   H+GH  E I AD+  RF R+ G ++ F    D HG  I   
Sbjct: 3   TNSRQILVTCALPYANGPIHLGHMLEHIQADIWVRFQRMRGNEIYFVCADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV  +  +    +         +IS+D++  T    + +    ++ K+   G I  
Sbjct: 63  ADQMGVKPEQLIADVQQKHMADFSGFNISFDNYHSTHSDENRELVEAIYHKLKQNGFIKT 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
              S  +      +  D            E   G + +  +A ++P++ +          
Sbjct: 123 RIISQLFDPEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELISPRSTVSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L A++  L  +  S     L  E  N++  + ++GL+   +SR    +
Sbjct: 183 PVLKESEHFFFDLPAFESMLTEWIRSGS---LQQEVANKMQEWFEAGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILR 269
           G KIP+      YVW+DA   Y+ +   L           FW  +      H IGKDI+ 
Sbjct: 240 GFKIPNTDNKYFYVWLDAPIGYMASFKNLCGKKSGIDFDSFWSKESHAELYHFIGKDIMY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKYLDPECLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++     D   + D   +RVN DL N + NL SR+ S I K +DG +         D+
Sbjct: 360 AAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKLADK----LDDK 415

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
            +        + I +  +N+   +A+ ++++L  + ++Y D + PW + K     D    
Sbjct: 416 MLFDEFIAQSELIADYYENREFGKAIREIMALTDKANKYVDEKAPWVIAKDESRTDELQQ 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFD 504
           V  + +E+ R L   L+  +P LA +    L   +  EN     LD ++ P       F 
Sbjct: 476 VCSMGIELFRVLIGYLKPVLPNLAARAEAFLNTQLTWENVASPLLDHQIAP-------FK 528

Query: 505 PIFPRF 510
           P+F R 
Sbjct: 529 PLFSRL 534


>gi|229496222|ref|ZP_04389942.1| methionyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316800|gb|EEN82713.1| methionyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 730

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 135/545 (24%), Positives = 240/545 (44%), Gaps = 42/545 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  ++TA+ Y N   HIGH A   + AD+  R+ R+ G +VLF  G+DEHG  I+ 
Sbjct: 53  KRFKRTLVTTALPYANGPVHIGHLAGVYVPADIYVRYKRMRGEEVLFIGGSDEHGVPISL 112

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     ++  +   I +D + RT+ + H +T    ++ + D     
Sbjct: 113 KAKAEGITPQQVVDRYHTLIKESFEQFGIDFDIYSRTSSRVHAETASQFFRTLYDNHKFI 172

Query: 121 KGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV------------------ 157
           +     +Y  + EA+  D        +    G Y +   +                    
Sbjct: 173 ERTSEQYYDPKAEAFLADRYIVGTCPHCHKPGAYGDQCESCGTSLNATDLIDPQSTISGA 232

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  E   ++  L  Y+D L  +     +         +  S++  GL+  ++SR   D
Sbjct: 233 KPELRETTHWYLPLDRYEDWLREWILDGHKEWK-SNVYGQCKSWIDMGLQPRAVSRD-LD 290

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           WGI +P +     ++YVW DA   Y++ T  L        + W  D     +H IGKD +
Sbjct: 291 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLP---ETWETWWKDSETRLIHFIGKDNI 347

Query: 269 RFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--L 325
            FH I +PA      +  LP  V ++ F+  +G+KIS S    +   E ++E       L
Sbjct: 348 VFHCIVFPAMLKAEGSYILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLQEFPGKEDVL 407

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     + R N +L    GN V+R+V +  K ++G +P  G  TE
Sbjct: 408 RYVLTANAPETKDNDFTWRDFQARNNNELVAIYGNFVNRAVVLTHKYFEGKVPEMGTLTE 467

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D++ L   + ++  +  ++       AL   + +    ++Y    +PW++ KT+  R +
Sbjct: 468 YDQATLQEVADLVPHLERHLDEFHFRDALRDAMQIARIGNKYLADTEPWKVAKTDLSRVA 527

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           T+L+V +++   L+I    F+P    ++ D+L VA  +         L PG  L + F  
Sbjct: 528 TILHVALQISANLSIAFAPFLPFSTRRLLDLLRVAPFDWSSLGRADLLVPGHQLAEPFL- 586

Query: 506 IFPRF 510
           +F + 
Sbjct: 587 LFEKI 591


>gi|116070585|ref|ZP_01467854.1| methionine--tRNA ligase [Synechococcus sp. BL107]
 gi|116065990|gb|EAU71747.1| methionine--tRNA ligase [Synechococcus sp. BL107]
          Length = 514

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 182/511 (35%), Positives = 266/511 (52%), Gaps = 12/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y N +PH+G  Y  +  D LARF RL   DVLF TG DEHGQKI + A+   
Sbjct: 3   YTLTTPLYYVNDKPHLGSTYTTLACDALARFKRLTQNDVLFITGVDEHGQKIQRTAEQKN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++     DQ S  ++D+    DIS D F+RTT  RH +     ++++   GDI  G  +G
Sbjct: 63  ISPMAHCDQVSERYQDLWSRWDISQDRFVRTTNPRHLELVEQFYERVKASGDIVTGRQTG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E + +D +                ++W +EE  FFRLS YQ   +    ++ +F
Sbjct: 123 WYCVGCEEFKDDPDDAVDPQ---CPIHQKTLEWRDEENLFFRLSRYQR-EIEELIANDDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RR EV +FV  GL+D S+SR    WGI +P  P +  YVW DAL  YLT      
Sbjct: 179 IAPASRRQEVRNFVARGLRDFSISRVNVSWGIPVPGHPGHTFYVWFDALLGYLTALLDDG 238

Query: 247 NPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                       WPA +HVIGKDILRFHA++WPA L+SA L LPK+VF HGF+  +G+K+
Sbjct: 239 GSVDLDRLADSGWPASVHVIGKDILRFHAVFWPAMLISAGLSLPKRVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++E+ G DA+R++L+R+I  G DG + +      VN DLAN IGNL++
Sbjct: 299 GKSLGNVLDPELLLEKCGTDAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +D  +P     +  +  +       +  +   M       A   ++ L   
Sbjct: 359 RTSSMARKWFDDSVPPHSVESHINHPLALKAQATIATVMRCMPELGFKAASESILQLAIA 418

Query: 424 VDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDILF--V 479
            + + +   PW   K   +  S     YV +E  R + +LL   +P L+++I + L   +
Sbjct: 419 ANGHLNDTAPWSRMKQQGEEQSVANDLYVVLESTRIVGLLLAPLLPDLSSRILNQLNCSL 478

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             E+   Q     L  G  L K  +P+  R 
Sbjct: 479 DPEHWLDQLHWGGLTSGTELPKP-EPVMARL 508


>gi|254168303|ref|ZP_04875149.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622812|gb|EDY35381.1| methionyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 750

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 131/543 (24%), Positives = 249/543 (45%), Gaps = 45/543 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++I  A  Y N   H+GH     + AD+ AR+ R+ G +VL  +G+DEHG  I   A+ 
Sbjct: 18  RIFIGVAWPYANGPIHLGHIVGAYLPADIFARYQRMQGNEVLMVSGSDEHGTPITITAEK 77

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +   D+  +   ++ + L IS+D + RT+   H    +  + ++ + G +YK   
Sbjct: 78  EGKSPQEIADRYHKINSEVMEKLGISFDLYFRTSHPNHEKIVKDFFLRLWENGYLYKKKM 137

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y  + + +  D  V                                       P ++
Sbjct: 138 LLPYCPQCKRFLPDRYVVGTCPYCGYENAHGDQCDNCGRMLDPKDLINPRCVICGTPTEF 197

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  FF LS  +  +L + E    +           +FVK GLKD +++R   +WG++
Sbjct: 198 RETEHIFFALSKLEGTILKWLEDKTYWR--DNVIKFTRNFVKGGLKDRAITRD-LEWGVE 254

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +P +      +YVW DA+  YL+ +      +    + +  D      + +GKD + FH 
Sbjct: 255 VPLEGFENKRIYVWFDAVIGYLSASIEWAKRNNKDWEVFWKDENTRHYYFLGKDNIPFHT 314

Query: 273 IYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I WPA L+    L LP  V ++ ++   GEK SKS G  +   E++E    D +R++   
Sbjct: 315 IIWPAMLMAHEGLNLPYNVVANEYLRFSGEKFSKSRGIGVWMPELLENFHPDIIRFYGTV 374

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
            +   +D  +  D   ++VN +L +   N V R++    +++  + P  G   E D   +
Sbjct: 375 NMPESRDSDFTWDDFVQKVNEELIDKFANFVHRALIFAYRNFGEVPPR-GDIDEVDREAI 433

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  + ++++ E M++  + +A  + ++L    + YFD + PW L K + ++ +T + ++
Sbjct: 434 KLIMQTMKKMNEYMESVELKKAFKEWLNLARYGNVYFDRKAPWALCKEDREKCATAINIS 493

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS----LDQRLKPGFMLHKTFDPIF 507
           +++++ LAIL   F+P  + +I+  L   +E+  FQ       + LK G  L K  + +F
Sbjct: 494 LQIVQALAILGAPFLPFTSERIWKFLG--NEDSIFQHKYIEAIKNLKVGEKL-KKPEVLF 550

Query: 508 PRF 510
            + 
Sbjct: 551 EKI 553


>gi|146306437|ref|YP_001186902.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|187647744|sp|A4XS54|SYM_PSEMY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145574638|gb|ABP84170.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 678

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 228/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E +  D+  R+ +L G   ++    D HG  I  
Sbjct: 1   MTEARKILVTSALPYANGSIHLGHMLEYVQTDMWVRYQKLRGNQAIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D++  T  + + +    ++  + DKG I 
Sbjct: 61  RAEKEGITPEQLIDGVRAEHMADFADFGVDFDNYHSTHSQENRELSASIYLALRDKGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ----------- 158
               + ++      +  D            E   G + +   A + P +           
Sbjct: 121 TRAVTQYFDPEKGMFLADRFIKGSCPKCGAEDQYGDNCEKCGATYTPTELKNPRSAISGA 180

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + +FF+L  ++  L  +  S     L     N++  ++  GL++  +SR    
Sbjct: 181 VPVLKESQHFFFKLPDFEAMLKQWTRSGA---LQEAVANKIAEWLDGGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCSKRPELDFDAFWGKDSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  DG++       E  
Sbjct: 358 YASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGLLVAANPEPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
             +          I E  + +   RA+ ++++L    + +   + PW L K    +A   
Sbjct: 416 --LWDAFQAAAPSIAEAYEARDFSRAMREIMALADRANAWIADKAPWALNKVEGKQAEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + + + RQL I+L+  +PKLA      L V  +   +  L   L     L+  F+P
Sbjct: 474 EICALGINLFRQLVIMLKPVLPKLAADAEAFLNVKPQ--TWADLSLPL-ANHQLN-PFNP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LLTRI 534


>gi|150009383|ref|YP_001304126.1| methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|187647739|sp|A6LFP0|SYM_PARD8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|149937807|gb|ABR44504.1| Methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 679

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 234/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYIMGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPVAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K  + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGATDLLEAGHQLGKA-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|255016240|ref|ZP_05288366.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 679

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 234/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSAMHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLREWILEGHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K  + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGATDLLEAGHQLGKA-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|315126748|ref|YP_004068751.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015262|gb|ADT68600.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 674

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 135/540 (25%), Positives = 233/540 (43%), Gaps = 46/540 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  V   S   +      +I +D++  T  + + +   +++ +++D G I K  
Sbjct: 63  KQGITPEEMVKNVSIERQRDFADFNIKFDNYHSTHSQENKEFSELIYNRLNDAGHIKKHT 122

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------ 160
            S  +      +  D            E   G       A ++P + +            
Sbjct: 123 ISQLFDPEKGIFLPDRFVTGTCPTCKSEDQNGDSCDACGATYSPTELINPRSVMSGAEPI 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E YFF L A++D L  +  S     +  E  N++  +   GL+   +SR    +G 
Sbjct: 183 LKDSEHYFFDLPAFEDMLKEWLHSGT---IQQEMANKLDEWFADGLQQWDISRDAPYFGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IP+ P    YVW+DA   Y+ +     D        FW         H IGKDI+ FH+
Sbjct: 240 EIPNAPGKYFYVWLDAPIGYMASFKNLCDKQGIDFDAFWQEGSDAELYHFIGKDIIYFHS 299

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF+HGF+   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 300 LFWPAMLEGAQFRKPTNVFAHGFVTVNGAKMSKSKGTFIKARTYLDNLDPEFLRYYYAAK 359

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   + +   +RVN+DL   + N+ SR    I K +DG +      T     +L
Sbjct: 360 LNSGITDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSN----TVMQPQLL 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +        I E  +N+   RA+ ++++L  + +++ D   PW L K     + A  V  
Sbjct: 416 AEFQNASATITEYYENREYSRAIREIMALADKANQFIDNAAPWVLIKDESKQEEAHQVCS 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P +A+ +   L    +   +Q     L     ++K F P+  R
Sbjct: 476 LGLNLFRVLITYLKPVLPGMASNVEAFLN---DELSWQGAQTALV-NHPINK-FKPLMQR 530


>gi|153207562|ref|ZP_01946245.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212217981|ref|YP_002304768.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064875|sp|B6J4V8|SYM_COXB1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120576530|gb|EAX33154.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012243|gb|ACJ19623.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 546

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 140/543 (25%), Positives = 229/543 (42%), Gaps = 42/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   
Sbjct: 3   TEKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMIT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  V +  +          I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 63  AQKQGLPPEALVAKMHKEHARDLGGFLIEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  Y    E +  D  +             G   +   A ++P +            
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E+    F  S  +   L         + P +  N++  +    LK   +SR    +G 
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGHLQP-QVANKLKEWFSEDLKPWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYL-------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           +IP       YVW+DA   Y+            ++     K        H +GKDI+ FH
Sbjct: 242 EIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L SA   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 ALFWPAMLSSAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYYAA 361

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  A  +D   + D   +RVNADL     NL SR    I K++ G +       +  ES 
Sbjct: 362 KLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYESF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
           L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K      +   V 
Sbjct: 422 L----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQAVC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + + L   L+  +P  A K+   L   + N  F +L   L     ++  F+P+  
Sbjct: 478 TQGLNLFKILTTYLKPILPVTAKKVEQFLNCDELN--FANLKTPLL-DHSVN-PFEPLMQ 533

Query: 509 RFL 511
           R L
Sbjct: 534 RLL 536


>gi|301312294|ref|ZP_07218211.1| methionine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300829716|gb|EFK60369.1| methionine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 679

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 234/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLKDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K  + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGATDLLEAGHQLGKA-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|157961740|ref|YP_001501774.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083265|sp|A8H3V2|SYM_SHEPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157846740|gb|ABV87239.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 679

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 231/542 (42%), Gaps = 48/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  + Q  +         +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 64  QQLGMTPEDMIAQVQKEHEKDFADFNIQFDNFHSTHSDENRELASEIYIKLRDAGYIKTK 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +      +  D            E   G +     A ++    ++          
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPRCKSEDQYGDNCDNCGATYSTTDLIDPKSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L +++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDTEHFFFDLPSFEGMLKEWINSGS---LQQEMANKLGEWFEQGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L N         FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDDFWSKDSTAEVYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D S
Sbjct: 361 AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAK-----IADTS 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +        + I    + +   +A+ +V++L    + Y     PW+L K +   + A  V
Sbjct: 416 LTESFLAKQETIANFYETREFGKAMREVMTLADIANAYVADSAPWQLIKDDAKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA  +   L +      + +LD  L  G  + K F  + 
Sbjct: 476 CTNALNLFRILVTYLKPVLPKLAQDVEAFLQME---LTWDNLDVDL-AGHEIAK-FKALM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|256842391|ref|ZP_05547894.1| methionyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256735998|gb|EEU49329.1| methionyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 679

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 234/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPAAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K  + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGATDLLEAGHQLGKA-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|154706261|ref|YP_001423731.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|165918316|ref|ZP_02218402.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|189083258|sp|A9KDF8|SYM_COXBN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|154355547|gb|ABS77009.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|165917966|gb|EDR36570.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 546

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 139/543 (25%), Positives = 228/543 (41%), Gaps = 42/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   
Sbjct: 3   TEKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMIT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  V +  +          I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 63  AQKQGLPPEALVAKMHKEHARDLGGFLIEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  Y    E +  D  +             G   +   A ++P +            
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E+    F  S  +   L         + P +  N++  +    LK   +SR    +G 
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGHLQP-QVANKLKEWFSEDLKPWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYL-------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           +IP       YVW+DA   Y+            ++     K        H +GKDI+ FH
Sbjct: 242 EIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 ALFWPAMLSGAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYYAA 361

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  A  +D   + D   +RVNADL     NL SR    I K++ G +       +  ES 
Sbjct: 362 KLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYESF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
           L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K      +   V 
Sbjct: 422 L----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQAVC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + + L   L+  +P  A K+   L   + N  F +L   L     ++  F+P+  
Sbjct: 478 TQGLNLFKILTTYLKPILPVTAKKVEQFLNCDELN--FANLKTPLL-DHSVN-PFEPLMQ 533

Query: 509 RFL 511
           R L
Sbjct: 534 RLL 536


>gi|225463876|ref|XP_002268996.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296081059|emb|CBI18340.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 124/561 (22%), Positives = 242/561 (43%), Gaps = 57/561 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G    
Sbjct: 15  VEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVLYICGTDEYGTATE 74

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     + +   D+  +  +++ D   IS+D+F RT+  +H + C+ ++KK+ +   +
Sbjct: 75  TKAMEENCSPQQICDKYHKIHKEVYDWFGISFDEFGRTSTPQHTEVCQAIFKKLMENNWL 134

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYF 166
            +      Y    + +  D  V              +G   +      NP +  +     
Sbjct: 135 SENRMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKV 194

Query: 167 FRLS-------------AYQDKLLSYYESHPEF--ILPIERRNEVISFVKSGLKDLSLSR 211
            + S                   L  Y ++                +++K GL+   ++R
Sbjct: 195 CQSSPQIRDTDHLFLELPLLKDKLEEYINNMSIAGCWSQNAIQATYAWLKEGLRSRCITR 254

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 255 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITA-CYTPEWEKWWKNPENVDLYQFMGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVD 323
            + FH + +P+ L+         K +    ++ ++  K SKS G  +   +V + ++  +
Sbjct: 313 NVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDVKDTKIPAE 372

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +    L+ ++N +L N +GN ++R +S I K     Y   IP 
Sbjct: 373 VWRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIAKAPGLGYGSSIPD 432

Query: 380 -PGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            PGA +    +++       L++  E M+   + + L   +S+ SE + Y    + W+L 
Sbjct: 433 APGAESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEGNGYLQESQFWKLY 492

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---CFQSLD---- 490
           K +    S V+  +V ++  L+ LL+ F+P  + ++   L +  E R   C ++ D    
Sbjct: 493 KEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDENGDLERA 552

Query: 491 ----QRLKPGFMLHKTFDPIF 507
               + L  G  +  T +P+F
Sbjct: 553 RKPWELLPAGHKMG-TPEPLF 572


>gi|307946518|ref|ZP_07661853.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770182|gb|EFO29408.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 510

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 178/509 (34%), Positives = 274/509 (53%), Gaps = 11/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHAY  I+AD++ R     G +++ +TG DEHGQK  +AA   
Sbjct: 2   KSYITTPIYYVNGSPHIGHAYTSIVADIMKRNRTALGYEMMLSTGVDEHGQKNQEAAAAL 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    ++D   + FR++ D+ D+ YD F+RT+   H      + + I DK  I K  Y+
Sbjct: 62  GMDAAAYLDMRCKEFREVFDLFDVDYDYFVRTSRDGHKQAVAAMEQTIFDKDLIVKKEYT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  D ++    DG+        ++  +E  YF ++  ++++LL + E +P+
Sbjct: 122 GKYCKGCEEFKRDTDLT--EDGKCALHPTMEIEESKEVNYFLKMEPFRERLLQHIEDNPD 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           F+ P   RNE+   +   L+DL +SR       G+ +P DP ++ YVW DAL NYLT   
Sbjct: 180 FVQPKAFRNELKQMLSEPLEDLCISRPKARVTLGVNLPFDPDFVTYVWFDALANYLTNIN 239

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE-K 302
           +   PDG  + +W    H+IGKDIL+ H +YWP  L++A LPLPKK+  H     +G  K
Sbjct: 240 W---PDGDYSAWWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWTGEGGVK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DP EV++ +GVDALR++L R +    D     + +++  N +L N IGNL+
Sbjct: 297 MSKSIGNVVDPNEVMDLMGVDALRWYLARHMRADSDSQISVELIRQTYNGELGNKIGNLL 356

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR      K++DG +PTPGA +  DE++            E +    I   +  ++S   
Sbjct: 357 SRVAKFSNKNFDGKVPTPGALSAEDEALRKQVLEATSGFGEWINMPDIPARIQALVSAAD 416

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++ Y D Q PW L K     +R +TVLYV ++  R L   L   +P  A K   +L V 
Sbjct: 417 AMNEYIDQQAPWSLFKNEETRERCATVLYVALDCQRILFEALMQVIPASATKALAMLNVP 476

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                +++   +L  G  L +    +FPR
Sbjct: 477 APAAPWKAELDKLPGGNTLGE-LTSLFPR 504


>gi|53802679|ref|YP_112557.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|68565970|sp|Q60CR0|SYM_METCA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53756440|gb|AAU90731.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 694

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 231/539 (42%), Gaps = 44/539 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  RF ++ G D  +    D HG  I  
Sbjct: 1   MTSPRKILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKMRGHDCRYVCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G++ +  + +             I +D++  T  +        ++ ++ D+G I 
Sbjct: 61  RAEKEGISPEELIARVHGEHLRDFTGFHIEFDNYYSTHSEETRAHAADIYGRLKDRGLIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
                 ++    E +  D  +             G   +     ++P             
Sbjct: 121 SRAIEQYFDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTDLINPYSVVSGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E   YFF+L    + L  +  S     L  E  N++  + ++GL D  +SR    
Sbjct: 181 APVRRESVHYFFKLGECAEFLKDWTRSGA---LQTEAANKLNEWFEAGLSDWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IPD P    YVW+DA   Y+ +     D      A++W  D      H IGKDIL 
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMGSFQNLCDRLGLDFAEYWKKDSEAELYHFIGKDILY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FHA++WPA L  +    P ++F+HGF+   GEK+SKS G  I     +E+ +  + LRY+
Sbjct: 298 FHALFWPAMLEHSGFRTPTRIFAHGFLTVNGEKMSKSRGTFITAQSYLEQGLNPEWLRYY 357

Query: 329 LV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--E 385
              +     +D     +    RVN+DL     N+ SR+   + K +DG +  P      E
Sbjct: 358 YACKLNGTMEDIDLSLEDFVARVNSDLVGKYINIASRTAGFVTKFFDGRLDVPMQLADGE 417

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
           + + ++       +EI     ++  ++A+ +++ L  EV+ + + +KPWE+ K +     
Sbjct: 418 ALDFLIDRLRDSAEEISGYYDSRDYNKAIRKIMELADEVNIFVNEKKPWEIAKRDDSYSR 477

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
                V  +T+ + R L I L+  +P+LA  +   L +   +  +Q     L  G  ++
Sbjct: 478 GYLRVVCAITLNLFRLLTIYLKPILPRLAEAVEGFLKIP--SLTWQDAQTLLPQGHTIN 534


>gi|29654984|ref|NP_820676.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|161830148|ref|YP_001597519.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|68566002|sp|Q83B24|SYM_COXBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189083259|sp|A9NA60|SYM_COXBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29542253|gb|AAO91190.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|161762015|gb|ABX77657.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 546

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 139/543 (25%), Positives = 228/543 (41%), Gaps = 42/543 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ ++ ++ A+ Y N   H+GH  E I AD+  RF RL G D LF  G D HG  I   
Sbjct: 3   TEKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMIT 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  V +  +          I YD+F  T    + +   +++ ++ DKGDI+ 
Sbjct: 63  AQKQGLPPEALVAKMHKEHARDLGGFLIEYDNFYTTHSPENRELAELIYTRLKDKGDIFA 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  Y    E +  D  +             G   +   A ++P +            
Sbjct: 123 KTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAK 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E+    F  S  +   L         + P +  N++  +    LK   +SR    +G 
Sbjct: 183 PIEKNSEHFFFSLNRYTQLLKKWIDAGHLQP-QVANKLKEWFSEDLKPWDISRDAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYL-------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           +IP       YVW+DA   Y+            ++     K        H +GKDI+ FH
Sbjct: 242 EIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A   LP  ++ HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 302 ALFWPAMLSGAGFRLPTTIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYYAA 361

Query: 332 E-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  A  +D   + D   +RVNADL     NL SR    I K++ G +       +  ES 
Sbjct: 362 KLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYESF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVL 448
           L    +  Q I +  ++    +A+  ++SL    ++Y DA+KPW L K      +   V 
Sbjct: 422 L----QTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQAVC 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + + L   L+  +P  A K+   L   + N  F +L   L     ++  F+P+  
Sbjct: 478 TQGLNLFKILTTYLKPILPVTAKKVEQFLNCDELN--FANLKTPLL-DHSVN-PFEPLMQ 533

Query: 509 RFL 511
           R L
Sbjct: 534 RLL 536


>gi|254242167|ref|ZP_04935489.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|126195545|gb|EAZ59608.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 678

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 131/546 (23%), Positives = 230/546 (42%), Gaps = 48/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRDAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHCIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 YFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFD 504
            V  + + + RQL I L+  +PKLA      L VA         D R L     L+  F 
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP----LTWADHRTLLANHQLN-PFQ 528

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 529 PLMTRI 534


>gi|33303697|gb|AAP22256.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 400

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 182/400 (45%), Positives = 272/400 (68%), Gaps = 8/400 (2%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
             D +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DI
Sbjct: 1   AGDAMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDI 60

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQ 148
           SYDDFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + + V    +G 
Sbjct: 61  SYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGD 120

Query: 149 YYNAQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KS 202
                 +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+   K 
Sbjct: 121 KVVGGKSPDSGHDVELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKP 180

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           GL+DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H+
Sbjct: 181 GLEDLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHL 240

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +GK+I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+
Sbjct: 241 VGKEIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGL 300

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PG 381
           DALRY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP    
Sbjct: 301 DALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKE 360

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             TE DE++++     L+++ E M+N     AL+ +  LV
Sbjct: 361 NVTEFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLV 400


>gi|293609112|ref|ZP_06691415.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292829685|gb|EFF88047.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 688

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 232/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVAYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  D G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNRDAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFSEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++         PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A T+    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAQCAETD---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|159903438|ref|YP_001550782.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888614|gb|ABX08828.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 509

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 181/507 (35%), Positives = 265/507 (52%), Gaps = 11/507 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + I+T + Y N +PH+G  Y  I  D  +RF RL G  V F TG DEHGQKI + AQ+ 
Sbjct: 2   NITITTPLYYVNDKPHLGSTYTTIACDAYSRFQRLQGNTVEFVTGVDEHGQKIQRTAQSH 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T +V  D+ S N++++    DI+Y  FIRTT   H +     + K+   GDI  G   
Sbjct: 62  QITPQVHCDKISLNYKELWKKWDITYTSFIRTTSPSHQELVNQFFDKVVKSGDILLGNQQ 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y +D      +          P++W +EE  FF LS YQ   +    + P 
Sbjct: 122 GWYCVGCEEYKDD---PPDSKSPCCPIHLKPLEWRDEENLFFALSKYQS-KIESLVAQPS 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P+ RRNE+++FV  GL+D S+SRK  +WGI +P    +  YVW DAL  YL+     
Sbjct: 178 FIQPLSRRNEILNFVSKGLRDFSISRKNVEWGIPVPGYKGHTFYVWFDALLGYLSSLLPM 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
               N        WPA +HVIGKDILRFHAIYWPA L+SA L LPKKVF HGF+  +G+K
Sbjct: 238 QNKINLADLSHYGWPASVHVIGKDILRFHAIYWPAMLMSAGLELPKKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN++DP  ++E+ G D +R++L+ +I  G+DG + +   +  VN DLAN IGNL+
Sbjct: 298 MGKSLGNILDPELLLEQYGKDPIRWYLLSDIRFGQDGDFQQKRFQDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ +M  K +D   P        D ++  +    +       +          VI L +
Sbjct: 358 NRTSTMSRKWFDNGTPDFD-INLEDSNLKLLAQESITSSLLAYEEFDFKTVCETVIKLAT 416

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           E + Y +  +PW L K   N +     LY  +E  R + +LL   +P   + I + L   
Sbjct: 417 ESNVYLNNTQPWTLIKEPSNKELVGYYLYNVLESCRIIGLLLLPIIPDTGSSILNQLGYT 476

Query: 481 DENRCF-QSLDQRLKPGFMLHKTFDPI 506
           ++   +   +   +     +     PI
Sbjct: 477 EQIDNWSDHIKWGVLSKGSILPKPTPI 503


>gi|301622256|ref|XP_002940449.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 562

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 179/529 (33%), Positives = 274/529 (51%), Gaps = 26/529 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R  LY +T I Y NA PH+GH Y  ++ADV  R+  + G++   +TGTDEHG K+ +AA
Sbjct: 33  TRPHLY-TTPIFYVNASPHLGHVYSALLADVQHRYSAMCGIESRLSTGTDEHGMKVQQAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +    F    S  FR++ D LDISY DF+RTTE RH +     W  + ++G IYKG
Sbjct: 92  SALSLDPHTFCSSVSLQFRNIFDDLDISYTDFVRTTEPRHKEAVSRFWMTLEERGYIYKG 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLL 177
            Y GWY   DEA+ ++ +  +  D +    +      + V W+ EE Y FRLS+ +  LL
Sbjct: 152 TYEGWYCTSDEAFLSEGQTAERIDSEGNKIRVSLESGHQVHWVSEENYMFRLSSLRPALL 211

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++ ++ P    P  R        +     +S  R    WGI +P D  +++YVW+DAL N
Sbjct: 212 NWLQTEPVHPAPFLRLVHHWLEEELPDLSVSRQRSRLSWGIPVPSDSSHVIYVWLDALVN 271

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  GY       +   W    H++GKDILRFHAIYWPAFL++A L  P K+  H    
Sbjct: 272 YLTAAGY----PNLQLAPWGPSTHLLGKDILRFHAIYWPAFLIAAGLSPPHKLLVHSHWT 327

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSL NV+DP + I     D LRY+L+R  A  +D  +     +  +N++LA+ 
Sbjct: 328 SEGTKMSKSLKNVVDPADCIRRYTKDGLRYYLLRHGAPERDCDFTHRTARTLLNSELADA 387

Query: 358 IGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +G L++R  +  +              P A  +  + +L+    +  E+ + ++   +H+
Sbjct: 388 LGGLLNRCTAPAINPMQHFPKFHYDSFPSAAHDQLQGVLANLQNLPAEVDQWVKKFQVHK 447

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKL 469
           AL  + + V   + +F +Q PW+L++     A+   +V+YVT+E +R  A LLQ  VP L
Sbjct: 448 ALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYVTLESLRLYATLLQPAVPGL 507

Query: 470 ANKIFDILFVADENRCFQ----SLDQRLKPGFMLHKTFDP----IFPRF 510
           A    + L V  E R  +        R +  +   +T  P    +FPR 
Sbjct: 508 ATAALERLGVPLEMRTLKGNTFLAATRGESCYFQGQTLGPEKGLLFPRL 556


>gi|224129132|ref|XP_002328898.1| predicted protein [Populus trichocarpa]
 gi|222839328|gb|EEE77665.1| predicted protein [Populus trichocarpa]
          Length = 801

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 118/558 (21%), Positives = 229/558 (41%), Gaps = 56/558 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 15  GKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T K   D+     R++    +IS+D+F RT+  +  + C+ ++KK+ D   + +
Sbjct: 75  AMEENSTPKQICDKYHAIHREVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLLDNNWLSE 134

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                 Y    E +  D  V              +G   +      NP + +       +
Sbjct: 135 NTMKQLYCDTCERFLADRLVEGTCPTEGCNYDSARGDQCENCGKLLNPTELINPRCKQCK 194

Query: 169 LSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +         +                                +++K GLK   ++R  
Sbjct: 195 NTPRIRDTNHLFLELPQLKDKLVSYIESMSVAGSWSQNAIQTTNAWLKEGLKPRCITRD- 253

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P D     + YVW DA   Y++ T     PD  K    P ++     +GKD +
Sbjct: 254 LKWGVPVPLDEFKDKVFYVWFDAPIGYVSITS-CYTPDWEKWWKNPDNVELYQFMGKDNV 312

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+ L+         K +    ++ ++  K SKS G  +   +  +  + V+  
Sbjct: 313 PFHTVMFPSTLIGTGENWTMMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVEVW 372

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----DYDGMIPTP 380
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K         +   P
Sbjct: 373 RYYLLTNRPEVSDTLFTWSDLQAKLNSELLNNLGNFINRVLSFLAKPPGLGYGSIIPDAP 432

Query: 381 GAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           GA +    + +     + +++  E M+   + + L   +S+ SE + Y    + W+L K 
Sbjct: 433 GADSHPLTKKLAGEVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 492

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF----------QSL 489
           +    S V+  ++ ++  LA LL+ F+P  + ++F  L +  E              +  
Sbjct: 493 DQPSCSIVIKTSLGLVYLLACLLEPFIPSFSVEVFKQLNLPLEQASLCDEKGDMDRAKRP 552

Query: 490 DQRLKPGFMLHKTFDPIF 507
            + L  G  +  T +P+F
Sbjct: 553 WEILPAGHKIG-TPEPLF 569


>gi|262384701|ref|ZP_06077834.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262293682|gb|EEY81617.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 679

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 234/542 (43%), Gaps = 36/542 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G +VL   G+DEHG  I  
Sbjct: 3   KHFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  VD+     +   +   I++D + RTT   HH      ++ + DKG+  
Sbjct: 63  RAKKEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFI 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +     +Y    + +  D  +             G   +      +P             
Sbjct: 123 EKTSEQYYDEEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGS 182

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +   P     +  S++  GL+  ++SR   D
Sbjct: 183 KPVMRETKHWYLPLDKWEPFLRKWILEDHKEWKPNVY-GQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFH 271
           WGI +P +     ++YVW DA   Y++ T  L           P    +H IGKD + FH
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPETKMVHFIGKDNIVFH 300

Query: 272 AIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYF 328
            I +P+      +  LP+ V ++ F+  +G+KIS S    +   E + ++    D LRY 
Sbjct: 301 CIVFPSMLKAEGSYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRYV 360

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       KD  +     + R N +L   +GN V+R++ +  K ++G +P  G  T+ D 
Sbjct: 361 LTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDKYFEGKVPVAGELTDYDR 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
             L   + V + +   +       A  + ++L    ++Y    +PW+L KT+  R +T++
Sbjct: 421 QTLKDFADVKENVERLLDTYHFRDAQKEAMNLARIGNKYLADMEPWKLAKTDMPRVATIM 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++   LAI  + F+P    K+  +L V             L+ G  L K  + +F 
Sbjct: 481 NIALQITANLAIAFEPFLPFSMEKLNKMLNVEPLGWNRLGATDLLEAGHQLGKA-ELLFE 539

Query: 509 RF 510
           + 
Sbjct: 540 KI 541


>gi|148546380|ref|YP_001266482.1| methionyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148510438|gb|ABQ77298.1| methionyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 710

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 224/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 32  MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ + G I 
Sbjct: 92  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSSLIYSRLREAGHIA 151

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 152 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 211

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 212 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 268

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 269 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELYHFIGKDIV 328

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 329 NFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 388

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  +G++    A  E  
Sbjct: 389 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGDAAPELT 448

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 449 EAFLA----AAPSIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 504

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 505 AICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVAP--LTWNDHLTRLE-NHTLN-PFKA 560

Query: 506 IFPRF 510
           +  R 
Sbjct: 561 LMSRI 565


>gi|241842777|ref|XP_002415428.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509640|gb|EEC19093.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 522

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 181/519 (34%), Positives = 287/519 (55%), Gaps = 20/519 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL--DVLFTTGTDEHGQKIAKAAQ 63
           + +I+T I Y NA PH+GH + +++AD L R HRL       +F+TGTDEHG KI +AA 
Sbjct: 5   RYFITTPIFYVNAGPHLGHHHTVVLADSLHRLHRLLAPSSPTIFSTGTDEHGLKIQQAAS 64

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A      F ++ S+ F+D+ D   I+Y D++RTTE+RH    R  W+ +  K  IY G 
Sbjct: 65  KAKQDELSFCNRISKQFKDLFDSTSITYTDYVRTTEERHKACVRHFWEVLQKKEHIYTGT 124

Query: 124 YSGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           Y GWYS ++E + +D E+       G   +      +PV+WMEE+ Y FRLS +QD L+ 
Sbjct: 125 YKGWYSTQEELFLSDSEIKEVPKEDGTPQKVSIESGHPVEWMEEKNYVFRLSRFQDDLIH 184

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
           + +S P  + P + ++ ++ ++++GL+DLS+SR+     WGI +P D    +YVW+DAL 
Sbjct: 185 WLKS-PGVVKPAKFQDLLVHWIRAGLQDLSVSRQSSRVKWGIMVPGDETQTIYVWLDALV 243

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT +GY           WP D HVIGKDIL+FH IYWPAFL++A L  P+ +  H   
Sbjct: 244 NYLTVSGYPGPNHS-----WPPDCHVIGKDILKFHGIYWPAFLIAAGLEPPRSILCHSHW 298

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
               EK+SKS GNV+ P++ +++   D +RYFL+RE     DG ++   +++ +NA+LA+
Sbjct: 299 TVNNEKMSKSKGNVLCPVKKVDKYTADGIRYFLLREGVPHSDGNFNSVKVQRLLNAELAD 358

Query: 357 GIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            +GNL+SR  + ++     +              + +L     +  +++       I++ 
Sbjct: 359 TLGNLLSRCTAPLVNKQQIFPAYNSKSFEELPDGQKVLVELQGLPDKVKARYLEGNIYQG 418

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L +V+ ++   +      KPWEL K+     R   VL++ +EV+R  AI+LQ  +P L+ 
Sbjct: 419 LDEVMHVLRRTNAVVQDAKPWELAKSPDAGHRLDAVLHMALEVLRVSAIVLQPVIPVLST 478

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +I D L V  + R +   +        L      +F R 
Sbjct: 479 RILDKLQVGGDERTWSCAETPDVRQRPLTTDKTHVFSRL 517


>gi|195501663|ref|XP_002097889.1| GE10041 [Drosophila yakuba]
 gi|194183990|gb|EDW97601.1| GE10041 [Drosophila yakuba]
          Length = 579

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 172/502 (34%), Positives = 269/502 (53%), Gaps = 23/502 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    + D  S+ +R++     I  +DFIRTTE RH       W+++  +G IY   YS
Sbjct: 81  GIPVAKYCDDISQRYREVFRSAGIQPEDFIRTTEDRHKRAVASFWRRLHTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQD-DVRHWVKQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +PDD    +YVW+DAL NYL++
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D      +  WP    VIGKDIL+FH IYWPAFLL+A+L  P++++ H      G+
Sbjct: 260 VGYPDE---EFSAHWPPAQQVIGKDILKFHGIYWPAFLLAADLEPPRQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++   +  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAARQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P+  A   +D        + +     ++ +    + +    H  
Sbjct: 377 LSRASAKSL-NPGQIYPSASAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ  +P+L
Sbjct: 436 ADTAMATLHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           AN++ D L V    R +  L +
Sbjct: 496 ANRLLDKLSVPTAQRGWHYLAE 517


>gi|119469304|ref|ZP_01612243.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119447168|gb|EAW28437.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 673

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 134/540 (24%), Positives = 236/540 (43%), Gaps = 46/540 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   AQ
Sbjct: 3   QRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHETYYVCADDAHGTPIMLNAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  V   S   +      +I +D++  T  + + +   +++ +++D G I K  
Sbjct: 63  KQGITPEEMVKNVSIERQRDFADFNIKFDNYHSTHSQENKEFSELIYNRLNDAGHIKKHT 122

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM------------ 160
            S  +      +  D            E   G       A ++P + +            
Sbjct: 123 ISQLFDPEKGIFLPDRFVTGTCPTCKSEDQNGDSCDSCGATYSPTELINPRSVMSGAEPI 182

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + E YFF L A++  L  +  S     +  E  N++  +   GL+   +SR    +G 
Sbjct: 183 LKDSEHYFFDLPAFEGMLKEWLHSGT---IQQEMANKLDEWFTDGLQQWDISRDAPYFGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHA 272
           +IP+ P    YVW+DA   Y+ +   L +  G     + A+       H IGKDI+ FH+
Sbjct: 240 EIPNAPGKYFYVWLDAPIGYMASFKNLCDKKGIDFDAFWAEGSEAELYHFIGKDIIYFHS 299

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+   +
Sbjct: 300 LFWPAMLEGAKFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAAK 359

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   + +   +RVN+DL   + N+ SR    I K +DG +      T     +L
Sbjct: 360 LNSGIIDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSA----TIMQPELL 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLY 449
                    I  + +N+   RA+ ++++L  + +++ D   PW L K  T    A  V  
Sbjct: 416 EDFQAAAPSITTHFENREYSRAIREIMALADKANQFIDGAAPWVLIKDETKQQEAHDVCS 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P +A  +   L    ++  + ++   L     ++K F P+  R
Sbjct: 476 LGLNLFRVLITYLKPVLPAMAQNVEAFLN---DDLAWDAVQTPLVS-HSINK-FKPLMQR 530


>gi|241765107|ref|ZP_04763097.1| methionyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241365258|gb|EER60093.1| methionyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 694

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 150/545 (27%), Positives = 231/545 (42%), Gaps = 49/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N   HIGH  E I AD+  R  RL G +V F    D HG  I  
Sbjct: 1   MSSARKLFVTTALPYANGNFHIGHIMEYIQADIWVRTQRLLGNEVNFVGADDTHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +   +   D   I +D++  T    +H   + ++  +   G I 
Sbjct: 61  AAEKAGKTPQQFVADIAAGRKQYLDGFHIQFDNWHSTDAPENHQLAQQIYLDLKANGLIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 ++      +  D  +             G + +   A + P   +         
Sbjct: 121 TRTIEQFFDPEKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAVYAPTDLINPYSALSGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---------VKSGLKD 206
                  E +FF+LS  +        +    + P         F            GL D
Sbjct: 181 TPVLKSSEHFFFKLSDPRCVAFLEDWTQNGRLQPEVANKVREWFTVRTNPDGSTSEGLGD 240

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261
             +SR    +GI+IPD P    YVW+DA   YL +   L    G     + AD      H
Sbjct: 241 WDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLLEKRGQNYDAYMADPQLEQYH 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-E 319
            IGKDI+ FH ++WPA L  +   +P  VF HGF+  + GEK+SKS G  +DP++ +   
Sbjct: 301 FIGKDIVTFHTLFWPATLKFSGRKVPDSVFVHGFLTVNNGEKMSKSRGTGLDPLKYLGLS 360

Query: 320 VGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +  + LRY+L  +++   +D  ++ D    RVN+DL     N+ SR+   I K + G   
Sbjct: 361 MNAEWLRYYLATKLSSRNEDIDFNADDFMARVNSDLVGKYINIASRAAGFISKRFGGQ-- 418

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G  +   +++L     V   + E +  +   +AL + + L   V+ Y D  KPWEL K
Sbjct: 419 -LGEVSADGDALLDHLRTVAPSVIELLAEREYGKALRETMLLTDRVNAYVDQNKPWELAK 477

Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
                 R   V    +E  R L ILL+  +P LA ++   L V  E   F S    L  G
Sbjct: 478 QEGMEGRLQDVCTTCIEAFRVLTILLKPVLPALAAQVEAFLKV--EPFTFASAQTALGKG 535

Query: 497 FMLHK 501
            ++ +
Sbjct: 536 HVIGE 540


>gi|198434929|ref|XP_002128793.1| PREDICTED: similar to methionyl-tRNA synthetase [Ciona
           intestinalis]
          Length = 883

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 125/547 (22%), Positives = 233/547 (42%), Gaps = 42/547 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  + + I++A+ Y N  PH+G+    ++ ADV +R+ RL G +VL+  GTDE+G     
Sbjct: 251 EGEKNILITSALPYVNNVPHLGNIIGCVLSADVFSRYCRLRGWNVLYICGTDEYGTATET 310

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT K   D+  +   ++ +   I +D F RTT +      + ++  +     + 
Sbjct: 311 KAAQEGVTPKEICDKYHKIHSEVYEWFSIGFDYFGRTTTECQTKIAQDIFWHLHRNNHLI 370

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFF-- 167
           K      Y  R E +  D  V            +G          N V+    +      
Sbjct: 371 KQTVEQLYCGRCERFLADRFVEGTCPLCAFEDARGDQCDKCGKLINAVELKSPKCKMCSD 430

Query: 168 ----RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTF 214
               R S +    LS  E      L    + E  S         +++ GLK   ++R   
Sbjct: 431 TPAIRTSEHLFVDLSKLEPKLRRCLQESFKGEGWSNNAKTITETWLRDGLKPRCITRD-L 489

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDILR 269
            WG  +P +     + YVW DA   YL+ T    +      K  P ++     + KD + 
Sbjct: 490 KWGTPVPLEGFTDKVFYVWFDAPIGYLSITANYTDKWELWWKN-PKNVQLYNFMAKDNVP 548

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALR 326
           FH++ +P+ LL  +        + +  ++ ++  K SKS G  +         +  D  R
Sbjct: 549 FHSVVFPSCLLGTDDEYTIVNHLNATEYLNYEEGKFSKSRGVGVFGDHASKTNIDSDIWR 608

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+     G+D  +       + N++L N +GN ++RS+  +   Y G++P P     +
Sbjct: 609 FYLLSMRPEGQDTHFSWSDFLLKNNSELLNNLGNFINRSLKFVSNAYGGVVPDP-VLNNT 667

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDR 443
           D  +L++ +R L++   +M    I   L +++S+    ++Y    +PW+L K    +  R
Sbjct: 668 DLELLALVNRELKDYVTDMDKLKIRDNLRRILSISRLGNQYLQENQPWKLIKGSNDDKSR 727

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           ASTV  +   +   L IL+  ++P+ ++ I D L +        ++ + L  G  ++K  
Sbjct: 728 ASTVTSIAANLSCLLCILIHPYMPQTSSIIQDQLNLRGGYLIPDAITRMLPSGHKINKP- 786

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 787 SPLFRKL 793


>gi|126466399|ref|YP_001041508.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015222|gb|ABN70600.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 500

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 174/475 (36%), Positives = 265/475 (55%), Gaps = 13/475 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA PHIGHAY  + ADVLAR+HRL G +V F TG DEHG K+ +AA+  G
Sbjct: 5   FYITTPIYYPNAPPHIGHAYTTVFADVLARYHRLIGDEVFFMTGNDEHGLKLQRAAEKKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  K FVD+ +  ++   ++LDISYD FIRTT+  H    +   +K+ DKG +YK  Y+G
Sbjct: 65  VHPKQFVDEMADVYKKYWELLDISYDYFIRTTDDYHEKVVKTAIQKLYDKGLVYKASYAG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E +Y+  E  +     +      P++W+EEE Y+F+LS ++D ++   ++    
Sbjct: 125 WYCVDCEKFYSPGEYIEINGKPHCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNKDIV 184

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
                    +    K GL+D+S++R      WGI++P D  Y +YVW DAL NY++  GY
Sbjct: 185 YPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISGIGY 244

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L++ D    K+WP   HVIGKDIL FH + W + L + ++ LPKK+  H F++++G KI 
Sbjct: 245 LEDMDR-FNKYWPNVHHVIGKDILWFHTVVWFSILKALDIELPKKLLVHAFLINRGLKIG 303

Query: 305 KSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           KS GNVI   ++I+     D +RY L+R     KD     +      N++LA+ +GNLV 
Sbjct: 304 KSAGNVIAIEDLIDRYQDSDGVRYILMRVFNMDKDVDVSTELFDSIYNSELADTLGNLVR 363

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   +  K   G++       E D+ + +     L +  E M+   + RA+  V+ L+ +
Sbjct: 364 RIGVLAKKKLGGIVYK----REVDKELSTSIVETLNKYNEYMEAYDVSRAIQVVMDLLRK 419

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + Y +  +PWE  K +P +    LY  +E IR    +L   +PK A+K+     
Sbjct: 420 ANAYVNLTRPWE--KMDPGKE---LYSLLETIRASTTMLYPIIPKAASKVSKAFG 469


>gi|194900723|ref|XP_001979905.1| GG21397 [Drosophila erecta]
 gi|190651608|gb|EDV48863.1| GG21397 [Drosophila erecta]
          Length = 579

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 177/533 (33%), Positives = 274/533 (51%), Gaps = 34/533 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    + D  S+ +R++     I  +DFIRTTE RH       W+ +  +G IY   YS
Sbjct: 81  GIPVAKYCDDISQRYREVFRSASIQPEDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQD-DVGHWVKA 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +PDD    +YVW+DAL NYL++
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDESQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +      +  WP    VIGKDIL+FH IYWPAFLL+A L  P +++ H      G+
Sbjct: 260 VGYPEEQ---FSAHWPPAQQVIGKDILKFHGIYWPAFLLAAGLKPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++   +  ++ LRYFL+RE     DG Y     ++ +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAARQYTMEGLRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P+  A   +D        + +     ++ +    + +    H  
Sbjct: 377 LSRACAKSL-NPGQIYPSASAEHLADLLRSLDAAKRLQDSLLQLSERCASHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ KPW LK   PD    R  T++ +T++ +R   I+LQ  +P+L
Sbjct: 436 ADTAMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQRLK------PGFMLHKTFDP-----IFPRFL 511
           AN++ D L V    R +  L +         PG    +  D      +F R L
Sbjct: 496 ANRLLDKLSVPAAQRGWNYLAESFATKPNSSPGLGESRQLDGQTSALLFQRIL 548


>gi|189240952|ref|XP_971597.2| PREDICTED: similar to methionine-tRNA synthetase [Tribolium
           castaneum]
          Length = 552

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 170/531 (32%), Positives = 268/531 (50%), Gaps = 24/531 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +   K +++T I Y NA PHIGH Y  +IAD L R+ ++ G     F+TGTDEHG KI +
Sbjct: 15  QSNSKFFVTTPIYYVNASPHIGHLYSSVIADALYRWQQVLGAGKFKFSTGTDEHGSKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA         +  + S +++ +++V  ISY DF+RT+++ H       W  + +KG I+
Sbjct: 75  AAHKNNTNPSDYCTRVSSDYKRLSEVFSISYTDFVRTSDEEHKKCVHKFWNVLKNKGKIF 134

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
              Y+GWY + DE++  + ++       G          +PV+W+EE  Y F L + QD 
Sbjct: 135 SSKYAGWYCISDESFLTESQLKEKVGPDGRKTIISGESGHPVEWIEEVNYMFPLGSLQDD 194

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           +  +  S         ++  +    K  L D+S+SR      WGI++PDD    +YVW+D
Sbjct: 195 VKYWLRSENAVRPAKFQKILLDMVSKGPLPDISISRPASRVHWGIQVPDDETQTVYVWLD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           AL NYLT  GY         + WP  + VIGKDIL+FH IYWP+FL++A L  P  +  H
Sbjct: 255 ALVNYLTAAGYSHASLH---QIWPPSVQVIGKDILKFHGIYWPSFLIAAGLDPPLSILCH 311

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                 GEK+SKS  NV+ P +  E    D LRYFL+RE     DG Y    + + +N++
Sbjct: 312 SHWTVDGEKMSKSKNNVVCPFQRSEIYSSDGLRYFLLREGVAHSDGNYSDTKVIRILNSE 371

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQN 407
           LA+ +GNL+SR     L  +              A ++  + ++   + +      +  N
Sbjct: 372 LADTLGNLLSRCCGTALNPHQTFPKIEASAFESVASSDVTKKLIEDVATLPDVCMGHYSN 431

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAF 465
              ++A+ +VI+ + + + +F+  KPWELKK +        VL++T+E +R   ILLQ  
Sbjct: 432 FNFYKAVDRVIATLHQANLFFETFKPWELKKESAKTRELDVVLHLTLETLRVCGILLQPI 491

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFM-----LHKTFDPIFPRFL 511
           +P +A+ + + + VA E R F                 L K    +F R +
Sbjct: 492 IPNIASNLLNKINVARERRTFSDAKILSWDDTNFVRKELAKDKTLLFKRIV 542


>gi|313678697|ref|YP_004056437.1| methionine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950304|gb|ADR24899.1| methionine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 516

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 160/487 (32%), Positives = 265/487 (54%), Gaps = 8/487 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK +   YI+T I Y +   HIGH Y   +A ++A + R+ G DV F TG+DEHGQKI +
Sbjct: 1   MKNK-TFYITTPIYYTSGPLHIGHLYCTTVAWIIANYKRVLGYDVKFLTGSDEHGQKIEQ 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG   +V+V++   +++ M    +I+YD F RTT+ +H    + ++ K    G IY
Sbjct: 60  KAALAGKEPQVYVNELVDSYKKMWQQYNINYDYFSRTTDPKHMKMVQTIFTKFLQLGLIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G YS+ DE +   ++        Y+    + +  M EE YFF++  +Q+  L+  
Sbjct: 120 KGKYDGLYSVNDEEFLTKNQAVFKNGEYYHPTSGHKLVLMSEESYFFKMKEFQNWWLNEV 179

Query: 181 ESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++PE++LP +  NE+I +FV  GL+DLS++R   +WGIK  +DP++ +YVW+DAL NY+
Sbjct: 180 NNNPEWLLPSKMTNEMISNFVSEGLEDLSVTRVNINWGIKTNEDPKHTLYVWLDALFNYV 239

Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +  G+  +  G     +  +    +H+IGK+I RFH IYW  F  +  + +P K+++HG 
Sbjct: 240 SALGFDLDNPGDDYLKYWENGDEIVHIIGKEISRFHFIYWTIFTKALGIKVPNKIYAHGL 299

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K G K+SKSL NVI+P  +  +   + ++Y+    I  G+DG + ++ L   VNADL
Sbjct: 300 LRDKDGRKMSKSLNNVIEPEYLFSKYHDEMIKYYFASAITFGEDGNFSEEKLIDIVNADL 359

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +   +    +       I    +  + +  E M N  + +AL
Sbjct: 360 VNNYGNLVSRTLKMISNSFPEGLFYRQSSQSEHLEIEGKINSFVPKFIELMDNFKLDKAL 419

Query: 415 AQVISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++L   +++Y D  +PW L  + N      +L   +  I  ++  LQ  +P    ++
Sbjct: 420 EHTMNLSDSLNKYIDTLRPWTLTSEENKAELENILIRLLNGIYAVSWSLQIVMPNKITEV 479

Query: 474 FDILFVA 480
              L + 
Sbjct: 480 AKALNIE 486


>gi|254236431|ref|ZP_04929754.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126168362|gb|EAZ53873.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 677

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 130/546 (23%), Positives = 229/546 (41%), Gaps = 48/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T++  +D              + +D++  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRDAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D  +             G + +   A + P +  + +      
Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+L  ++  L  +  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKESLHYFFKLPDFEAMLKQWTRSGA---LQESVANKLAEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L           FW  D      H I KDI+
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMPSFKNLCTRRPELDFDAFWGKDSSAELYHFIAKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  +     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLDHLDPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++    +D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVGADPAPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
             +L+        I E  + +  +RA+ ++++L    + +   Q PW L K     D+  
Sbjct: 416 --LLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQDKVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFD 504
            V  + + + RQL I L+  +PKLA      L VA         D R L     L+  F 
Sbjct: 474 AVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAP----LTWADHRTLLANHQLN-PFQ 528

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 529 PLMTRI 534


>gi|34540030|ref|NP_904509.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|68565991|sp|Q7MXK7|SYM_PORGI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|34396341|gb|AAQ65408.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 680

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 43/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G D L   G+DEHG  IA 
Sbjct: 3   RQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIAL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +  VD+     +   + L IS+D + RTT   H  T    +K + +KG+  
Sbjct: 63  KAKAEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFV 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW---------- 159
           +     +Y    + +  D  +             G   +      N              
Sbjct: 123 EQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEACGTSLNATDLIDPRSTISGS 182

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +         +  S++  GL+  ++SR   D
Sbjct: 183 APVLRETKHWYLPLDKHEPFLKEWILDGHKEWK-SNVYGQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILR 269
           WGI +P +     ++YVW DA   Y++ T  L          W ++    +H IGKD + 
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCPDSWETW--WKSEDTRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V ++ F+  +G+KIS S    +   E +EE     D LR
Sbjct: 299 FHCIVFPAMLRAEGSFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHKYFDGAVPPKGELTDC 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   +   + V Q +   +       AL + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 419 DSRTIEEFAAVKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKTDMNRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFD 504
           +L +++++   LAI  + F+P  + K+  +L   D    +  L     L  G +L    +
Sbjct: 479 ILNLSLQITANLAIAFEPFLPFSSAKLMSMLST-DCPFGWDRLGSTDLLPEGHVLGNP-E 536

Query: 505 PIFPRF 510
            +F + 
Sbjct: 537 LLFEKL 542


>gi|332036949|gb|EGI73408.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 673

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 137/541 (25%), Positives = 240/541 (44%), Gaps = 46/541 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ I++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 2   TQRKILITSALPYANGPTHLGHLLEYIQTDIWSRFQKLQGHEAYYVCADDAHGTPIMLNA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  V Q S   +      +I +D++  T  + + +   +++ +++D G I K 
Sbjct: 62  QKQGITPEEAVKQVSIERQRDFADFNIKFDNYHSTHSQENKELSELIYNRLNDAGHIKKH 121

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             S  +      +  D            E   G       A ++P   +           
Sbjct: 122 TISQLFDPEKGIFLPDRFVTGTCPTCKSENQNGDSCDSCGATYSPTDLINPRSVMSGAEP 181

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E YFF L A++  L  +  S     +  E  N++  +   GL+   +SR    +G
Sbjct: 182 VLKDSEHYFFDLPAFEGMLKEWLHSGT---IQQEMANKLDEWFTDGLQQWDISRDAPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
            +IP+ P    YVW+DA   Y+ +   L +  G     + A+       H IGKDI+ FH
Sbjct: 239 FEIPNAPGKYFYVWLDAPIGYMASFKNLCDKTGIDFDAFWAEGSDAELYHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  AN   P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+   
Sbjct: 299 SLFWPAMLEGANFRKPTNVFAHGFVTVNGEKMSKSKGTFIKARTYLDNLNPEYLRYYYAA 358

Query: 332 EIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++ G  D   + +   +RVN+DL   + N+ SR    I K +DG +       E    +
Sbjct: 359 KLSSGIVDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFITKKFDGKLSNIIMQPE----L 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVL 448
           L+        I  + +N+   RA+ ++++L  + +++ D   PW L K  T    A  V 
Sbjct: 415 LAEFQAAAPSITTHYENRDYSRAIREIMALADKANQFIDGAAPWVLIKDETKQQEAHEVC 474

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P +A+ +   L    ++  +  +   L     ++K F P+  
Sbjct: 475 SLGLNLFRVLITYLKPVLPGMADNVQAFLN---DDLAWDGVQNALVS-HPINK-FKPLMQ 529

Query: 509 R 509
           R
Sbjct: 530 R 530


>gi|315607117|ref|ZP_07882121.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251171|gb|EFU31156.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 686

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 131/550 (23%), Positives = 248/550 (45%), Gaps = 43/550 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+  +  ++  +   IS+D + RTT K H       ++K+ D G 
Sbjct: 61  TIRAKKEGITPQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW-------- 159
           + +     +Y      +  D  +             G   +   +  +P++         
Sbjct: 121 LVEKETEQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTIS 180

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + ++  L+ YQ  L  +     +   P     +  S++   L+  +++R  
Sbjct: 181 GSKPVVRKTKNWYLPLNDYQGWLKQWILDEHKEWRPNVY-GQCKSWLDMDLQPRAMTRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVI 263
            DWGI +P +     ++YVW DA   Y++ T  L + +  K    + W  D     +H I
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDREPEKWGSWEKWWKDEDTRLIHFI 298

Query: 264 GKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG- 321
           GKD + FH I +P          LP  V ++ F+  + +KIS S    +   E + E+  
Sbjct: 299 GKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLRELPG 358

Query: 322 -VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P  
Sbjct: 359 KQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWDGVVPAC 418

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E D+  +     V +++   +       A  + ++L    ++Y    +PW++ KT+
Sbjct: 419 GELLEVDQQTIHEFKDVQEKVEGYLDAFKFREAQKEAMNLARIGNKYITECEPWKVWKTD 478

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LKPG  L 
Sbjct: 479 PKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSRLGATDLLKPGHQLA 538

Query: 501 KTFDPIFPRF 510
           +  + +F + 
Sbjct: 539 EP-ELLFEKL 547


>gi|70732169|ref|YP_261925.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123762009|sp|Q4K758|SYM_PSEF5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68346468|gb|AAY94074.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 681

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 133/545 (24%), Positives = 228/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHCADFAEFLVDFDNFHSTHAEENRELSSQIYLKLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L S+  S     L     N++  ++ +GL+   +SR    
Sbjct: 181 TPVLKDSQHFFFKLPDFQQMLQSWTRSGT---LQDAVANKIAEWLDAGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD+P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+
Sbjct: 238 FGFEIPDEPGKYFYVWLDAPIGYMASFKNLCSRRPELDFDAFWGKDSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  I     +E +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGYRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLEHLSPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  
Sbjct: 358 YASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVMVDSNAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I +  + +   RA+ +++ L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPSIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +    Q+L     L+K F P
Sbjct: 474 AICATGIILFRQLVIFLKPVLPLLAADAEAFLNVAP--LTWND-HQQLLANHQLNK-FKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|91775274|ref|YP_545030.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91775418|ref|YP_545174.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123451971|sp|Q1H2F4|SYM_METFK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91709261|gb|ABE49189.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91709405|gb|ABE49333.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 692

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 134/532 (25%), Positives = 231/532 (43%), Gaps = 45/532 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL +++A+ Y N   H+GH  E + +D+  RF ++ G  V +    D HG  I   A+ 
Sbjct: 17  RKLLVTSALPYANGSIHLGHMVEYVQSDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEK 76

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +             +++D++  T  + + +    +++ +   G I     
Sbjct: 77  EGITPEELIRRVHAEHYADFSDFLVAFDNYYSTNSEENRELASQIYRALKANGKIATRTI 136

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
             +Y      +  D  +             G   +     ++P + +             
Sbjct: 137 EQYYDPVKHMFLPDRFIKGECPKCHAKDQYGDSCESCGTTYSPTELIAPYSAVSGAAPVR 196

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS  +D L  +  S     L  E  N++  +  SGL D  +SR    +G +
Sbjct: 197 KETEHYFFKLSECEDFLRQWTRSGT---LQPEAANKMGEWFASGLSDWDISRDAPYFGFE 253

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +             ++W  D      H IGKDIL FHA+
Sbjct: 254 IPDAPGKYFYVWLDAPIGYMASFKDLATREGLDFDEYWKPDSQAELYHFIGKDILYFHAL 313

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVRE 332
           +WPA L  +    P KVF+HGF+   GEK+SKS G  I     ++ V   + LRY+   +
Sbjct: 314 FWPATLKFSGYRQPTKVFAHGFLTVNGEKMSKSRGTFITARSYLDHVKNPEYLRYYYAAK 373

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D   + +    RVN+DL     N+ SR+   I K +DG + T G       +++
Sbjct: 374 LNGSMEDIDLNLEDFVARVNSDLVGKYVNIASRTAGFIAKRFDGKLGTVGE-----NAVI 428

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449
           +        IRE+ +N+   RA+  +++L  + + Y     PW++ K     A+   V  
Sbjct: 429 AELRAAADSIRESFENRDTARAVRDIMALADKANAYVAEHAPWDMAKQPEQTAALHAVCS 488

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           V +E+ R L + L+  +P LA  +   L +  +   +  +D+ L  G  +  
Sbjct: 489 VALEMFRLLTLYLKPVLPGLAQAVEKFLKI--DPLTWADIDRPLPAGHQIQA 538


>gi|188994145|ref|YP_001928397.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|226710912|sp|B2RHF5|SYM_PORG3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|188593825|dbj|BAG32800.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 680

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 139/546 (25%), Positives = 238/546 (43%), Gaps = 43/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  I+TA+ Y N   HIGH A   + AD+ AR+ RL G D L   G+DEHG  IA 
Sbjct: 3   RQFKRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIAL 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +  VD+     +   + L IS+D + RTT   H  T    +K + +KG+  
Sbjct: 63  KAKAEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFV 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW---------- 159
           +     +Y    + +  D  +             G   +      N              
Sbjct: 123 EQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEACGTSLNATDLIDPRSTISGS 182

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + ++  L  ++  L  +     +         +  S++  GL+  ++SR   D
Sbjct: 183 APVLRETKHWYLPLDKHEPFLKEWILDGHKEWK-SNVYGQCKSWLDMGLQPRAVSRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILR 269
           WGI +P +     ++YVW DA   Y++ T  L          W ++    +H IGKD + 
Sbjct: 241 WGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCPDSWETW--WKSEDTRLVHFIGKDNIV 298

Query: 270 FHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           FH I +PA      +  LP  V ++ F+  +G+KIS S    +   E +EE     D LR
Sbjct: 299 FHCIVFPAMLRAEGSFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKQDVLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L       KD  +     + R N +L    GN V+R++ +  K +DG +P  G  T+ 
Sbjct: 359 YVLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHKYFDGAVPPKGELTDY 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D   +   + V Q +   +       AL + ++L    ++Y    +PW+L KT+ +R +T
Sbjct: 419 DSRTIEEFAAVKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKTDMNRVAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFD 504
           +L +++++   LAI  + F+P  + K+  +L   D    +  L     L  G +L    +
Sbjct: 479 ILNLSLQITANLAIAFEPFLPFSSAKLMSMLST-DCPFGWDRLGSTDLLPEGHVLGNP-E 536

Query: 505 PIFPRF 510
            +F + 
Sbjct: 537 LLFEKL 542


>gi|170029048|ref|XP_001842406.1| methionine-tRNA synthetase [Culex quinquefasciatus]
 gi|167879456|gb|EDS42839.1| methionine-tRNA synthetase [Culex quinquefasciatus]
          Length = 553

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 170/518 (32%), Positives = 274/518 (52%), Gaps = 17/518 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL---FTTGTDEHGQKIAKAAQN 64
           +++T I Y NA PHIGH Y  +IAD + RF+ L         F+TGTDEHG KI +AA  
Sbjct: 20  FVTTPIFYVNAAPHIGHLYSAVIADAIHRFNGLLNDPSGPSLFSTGTDEHGTKIQQAAAK 79

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             V    +  Q S  +R +    ++ Y  FIRTT+  H D  + +WK +   G IY   Y
Sbjct: 80  HSVPVATYCQQISDQYRSLFRDFNVEYSRFIRTTDDDHADAVQSIWKALEASGSIYSAQY 139

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           SGWY + DE +  D ++ +   G   +    +PV+W EE  + FRL  +Q  +L + +  
Sbjct: 140 SGWYCVPDETFLTDSQLKENDQGVKVSVDSGHPVEWTEERNFMFRLERHQADVLHWIKGC 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            + ++P + +  ++ F++  L D+S+SR      WGI++P DP   +YVW+DAL NYLT 
Sbjct: 200 EDRVVPGKFQKILLDFLEEPLPDISISRPQARVSWGIEVPGDPTQSVYVWLDALVNYLTV 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY         + WP  + V+GKDIL+FH IYWPAFL++A L  P+++  H       +
Sbjct: 260 AGYPHP---EFGQRWPPTVQVLGKDILKFHGIYWPAFLIAAGLEPPRQLLVHSHWTVDNQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E       + LR+FL+RE     DG Y    + + +NA+LA+  GNL
Sbjct: 317 KMSKSKLNVVDPNERASLYTHEGLRFFLLREGVAHSDGNYSDTKVMRILNAELADTFGNL 376

Query: 362 VSRSVSMILKD------YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +SR     L         +  +       E  + +L +   + ++   + +N   +  + 
Sbjct: 377 LSRCCGKALNPEGIVPTINPEVFNELGKLEITKKMLDLLHALPEKCLSHYRNFNFYLVVD 436

Query: 416 QVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            VI ++   + +F+   PW+LK     ++ +T+L +T+EV+RQ  I++Q  VP+L+ K+ 
Sbjct: 437 SVIQVLHATNNFFETTAPWKLKAPEQRNQLNTILALTMEVLRQTGIIMQPIVPQLSGKLL 496

Query: 475 DILFVADENRCFQSLDQRL-KPGFMLHKTFDPIFPRFL 511
           D L V+   R ++ L  +  +    L +    +F R +
Sbjct: 497 DKLSVSRHRRLWRDLHGQFDRKQRSLAEIDAVLFRRIV 534


>gi|85712085|ref|ZP_01043138.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694075|gb|EAQ32020.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 680

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/541 (25%), Positives = 234/541 (43%), Gaps = 49/541 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   HIGH    I AD+  RF +L G +  +    D HG  I   AQ 
Sbjct: 6   RKILVTNALPYANGPIHIGHLLGYIQADIWVRFQKLRGHECHYMCADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +    R+        +I +DD+  T  + +      +++++ D G I     
Sbjct: 66  LGITPEQMIGDMQRSHEADFAGFNIGFDDYYTTHSEENKALAETIYQRLDDAGHIKTEVI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPV--------------QW 159
              Y    + +  D            E   G +     A + P               + 
Sbjct: 126 EQLYDPEKKMFLPDRFVKGDCPECGAEDQYGDNCDVCGATYAPTDLKNPRSVVSGATPEL 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E YFF L A+ D L S+  S     L  E  N++  + + GL+   +SR    +G K
Sbjct: 186 RQSEHYFFDLPAFGDMLKSWTRSGS---LQGEMANKLNEWFEQGLQRWDISRDAPYFGFK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP       YVW+DA   Y+++  +  +   + +   +W AD      H IGKDI+ FH+
Sbjct: 243 IPGTEDKYFYVWLDAPIGYMSSFKHYCDTTGNANWDDYWQADSTAEVYHFIGKDIIYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P  V++HGFI   G K+SKS G  I     ++ +  + LRY+   +
Sbjct: 303 LFWPAMLKGAQFRQPTNVWAHGFITVNGTKMSKSKGTFIKARTYLDHLNPEYLRYYFAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   +     +RVN+DL   + N+ SR    I K +DG +      + +D ++L
Sbjct: 363 LTSRIDDLDLNLTDFAQRVNSDLVGKVINIASRCAGFITKKFDGKLSA----SVADSALL 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                   EI E  + +   +A+ ++++L    ++Y   ++PW+L K NPD AS V    
Sbjct: 419 EDFQNAGTEIAELYEQREFSKAMREIMTLADRANQYIADKEPWQLIK-NPDAASEVHDTC 477

Query: 452 ---VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + R L + L   VP+L+  +   L    +   + S  Q L     + K F  +  
Sbjct: 478 SLGINLFRILMVYLTPVVPELSKSVQHFLN---DQFSWDSHKQVLT-NHPIDK-FKALMQ 532

Query: 509 R 509
           R
Sbjct: 533 R 533


>gi|88801601|ref|ZP_01117129.1| methionyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782259|gb|EAR13436.1| methionyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 684

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 134/548 (24%), Positives = 241/548 (43%), Gaps = 40/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV +  G+DEHG  I 
Sbjct: 1   MSAPKRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLIGKDVAYICGSDEHGVAIP 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GV+ +  +D+     +       IS+D++ RT+ + HH T    + K+ + GD 
Sbjct: 61  MRAKKEGVSPQHIIDKYHGIIKQSFLDFGISFDNYSRTSNELHHKTASEFFTKLHNNGDF 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE----- 163
            +   +  Y      +  D            E   G   +     HN    +  +     
Sbjct: 121 IEETSAQLYDAEANQFLADRFVVGTCPKCNFEESYGDQCESCGTSHNATDLINPKSAITG 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     +F  L  ++D L  +     +         +V S+++ GL+  +++R   
Sbjct: 181 NVPTVKKTKHWFLPLDKHEDFLREWILEGHKKDWKPNVYGQVKSWIEDGLRPRAVTRD-L 239

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----LHVIGKDI 267
           DWGI +P       ++YVW DA   Y++ T  +      +   +W  D    +H IGKD 
Sbjct: 240 DWGIPVPLKEADGKVLYVWFDAPIGYISSTKEWAAREGKNWEDYWKRDDTKLVHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+      +  LP  V ++ F+  +G K+S S    +   E + E     D 
Sbjct: 300 IVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLAEFPNQQDV 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L       KD  +     + + N +L    GN ++R V +  K Y G++P P  F+
Sbjct: 360 LRYTLTANAPENKDNDFTWKDFQAKNNNELVAIFGNFINRVVVLTNKYYGGVVPAPNDFS 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + DE  L+        I ++++      A  ++++L    ++Y   ++PW++ K +  R 
Sbjct: 420 DIDEDTLAAVKEFPNTIGKSIERYRFREASQELMNLARLGNKYLADEEPWKVIKLDEKRV 479

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHKT 502
            T+LYV +++   LA++ + F+P  A K+  IL + D +  ++ + +   L P       
Sbjct: 480 QTILYVALQISAALAVVSEPFLPFTAKKLKGILNI-DSHLSWEDVVENAILLPATHQINK 538

Query: 503 FDPIFPRF 510
            + +F + 
Sbjct: 539 AELLFSKI 546


>gi|161485679|ref|NP_632891.2| methionyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|25009360|sp|Q8PYJ4|SYM_METMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 715

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 128/539 (23%), Positives = 231/539 (42%), Gaps = 42/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N + HIGH    + AD+ AR  + +G +V F  G+D HG  I   A+ 
Sbjct: 11  KPVLVTCGLPYANGKAHIGHLRTYVPADIYARSLKKEGREVTFVCGSDTHGTPIVVNAEE 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T    V+   ++F +    L I +D F  T +  +H+    +  ++ +KG +Y    
Sbjct: 71  LGITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEKGYVYPKII 130

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y      +  D  V                                       P ++
Sbjct: 131 EIAYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEY 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            ++E +FF+LS + + L+ Y     +        N    +VK GL D  ++R   +WG+K
Sbjct: 191 RQQEHFFFKLSEFSNYLMDYLS--KDLGGTTNAINYARGWVKQGLTDWCITR-NLEWGVK 247

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T  +      S  KFW  D   +H IG DI   H I+W
Sbjct: 248 FPGHEDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGDGEIVHFIGGDITYHHCIFW 307

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A+  +P  V + G +  +  K SK+ G V+   E  +      D LRY+L    
Sbjct: 308 PAMLKGADYSVPTAVVASGMVKIEDRKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYT 367

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  K+  +    L++++NA+L   +GN + R++    K+Y  +             I   
Sbjct: 368 SHTKELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEVPEGEVEPE-----IRKE 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + L E++  M+     +A+   ++L S  + YF + +PW+L K + D    V+Y  + 
Sbjct: 423 IEKALVEVKAAMEEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRDACGQVVYNCLH 482

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + L+++ +  +P+   K +  L    +     ++     LK G  L K  + +F + 
Sbjct: 483 LAKALSLIFEPVIPQTMEKAWKGLGHESDIHAALYEETLVPLKAGTKLAKP-EILFTKL 540


>gi|237748784|ref|ZP_04579264.1| methionyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380146|gb|EEO30237.1| methionyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 695

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 152/554 (27%), Positives = 242/554 (43%), Gaps = 54/554 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIA 59
            KL+++TA+ Y NA  HIGH  E I AD+  RF R+   D     V F    D HG  I 
Sbjct: 3   RKLFVTTALPYANAPFHIGHIMEYIQADIWVRFQRMQKDDGKQREVHFVGADDVHGAPIM 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA+ AG T + FV + +   +   +   IS+D++  T    +++  R +++++  KG I
Sbjct: 63  IAAEKAGKTPQEFVAEIAAGRKAPLNGFLISFDNWHSTDGPENYELSREIYRRLKAKGLI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------ 162
                  ++    E +  D  +             G   +  +  + P +          
Sbjct: 123 VSRTIEQFFDPVKEMFLPDRYIKGECPKCGAKDQYGDTCEVCSTVYAPTELKNPYSILTG 182

Query: 163 --------EGYFFRLSAYQDKLLSYYES----HPEFILPIERRNEVISF------VKSGL 204
                   E +FFRLS  Q        +    +    L  E  N+   +       ++ L
Sbjct: 183 ATPVMKQSEHFFFRLSDPQCTEFLKEWTLGKVNGHPRLQPEVANKAREWLQGKDGEENAL 242

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----- 259
            D  +SR    +GI+IPD P    YVW+DA   YL +     +  G     + AD     
Sbjct: 243 SDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNYFSKTGGDYDAFMADPETEQ 302

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIE 318
            H IGKDI+ FH ++WPA L  A++ +P  V+ HGFI   GEK+SKS G  I P+  +  
Sbjct: 303 YHFIGKDIIYFHTLFWPAMLHFADMRVPNNVYVHGFITVGGEKMSKSRGTGISPLRYLDI 362

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+L  +++   +D  +  +    RVNADL     N+ SR+   I K + G +
Sbjct: 363 GMNPEWLRYYLAAKLSDRVEDLDFTGEDFIARVNADLIGKYVNIASRAAGFITKRFGGKL 422

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A    D  IL        EI E  + +   +AL Q++ L  EV+ Y D  KPW L 
Sbjct: 423 AAGWALK--DTPILDNLRAAAPEIAELYEAREFGKALRQIMHLADEVNAYVDEHKPWVLA 480

Query: 438 K--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K     +    V    +E  R L I L+  +P +A K+   L +   +  +  + + L  
Sbjct: 481 KDPEKTEELHQVCTRLLEAFRLLTIYLKPVLPAVAEKVEGFLNLP--SLEWSDVSKPLAD 538

Query: 496 GFMLHKTFDPIFPR 509
           G  ++  ++ +  R
Sbjct: 539 GHAIN-PYEHLMQR 551


>gi|219851353|ref|YP_002465785.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782869|sp|B8GFL4|SYM_METPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219545612|gb|ACL16062.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 663

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 228/541 (42%), Gaps = 44/541 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +  + ++  + Y N   H+GH    +  D+  R+ R  G +V+F  G+D HG  I  +A
Sbjct: 2   SKGPILVTCGLPYTNGPCHLGHLRTYVPGDMYVRYLRHRGEEVVFVCGSDNHGTPIVVSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT K    +   +F +    + I +D F  T  K +H   R + +++ DKG IY  
Sbjct: 62  EEQGVTPKELSLKYHHHFEETFIKMGIRFDRFGMTDGKANHHRTREMMQRLIDKGYIYSA 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPV 157
             S  Y      +  D  V                                         
Sbjct: 122 TVSQSYCTTCSRFLPDRYVEGICPHCGAVARGDECDQGCGKHLEPGEIRDPVCKVCGTRA 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +   +E +FF+LSA+++ L ++             +N  + +V   L D  ++R T DWG
Sbjct: 182 ELRSQEHFFFKLSAFKEFLGTFL---KGVRGTDNAKNYALGWVNDDLHDWCITR-TLDWG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAI 273
           +K P     ++YVW+DA   Y+  T  +         +FW  D    H IG DI   H I
Sbjct: 238 VKFPGRDDLVVYVWVDAPVGYIAFTEEWAAAHGRDWREFWCGDGEITHFIGGDITYHHCI 297

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVR 331
           +WPA L  A   +P  + + G +     K SKS G V+   +   ++G   D LRY+L+ 
Sbjct: 298 FWPALLKGAGYGVPSAIVASGMLKIDDHKFSKSRGYVVWTNDDYLDLGLPADYLRYYLLA 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  K+  +       RVN +L N  GN V R++          IP      ++D+ IL
Sbjct: 358 YTSHTKELNFSWQAFADRVNNELVNTFGNFVHRTLHFAHA-QGIGIPDL----DADQEIL 412

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                 +  +   M       A+  V++L +  + Y     PW+L KT+   A  V+   
Sbjct: 413 QRIDETIAAVDTAMDAFEFKNAVDAVMTLAAFGNNYIQTAAPWKLIKTDRPAAVQVIRNC 472

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPR 509
           ++++R LA+L+   +P+ A+KI+ +L   D+ R  ++ +  + L  G +       +F R
Sbjct: 473 LQLVRALALLIDPTMPETASKIWMMLGETDQVRDHRTSEATEPLTAGEL--APPTTLFAR 530

Query: 510 F 510
            
Sbjct: 531 M 531


>gi|330720454|gb|EGG98763.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 711

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 129/541 (23%), Positives = 232/541 (42%), Gaps = 46/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I   A+ 
Sbjct: 28  RKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKQRGETCTYVCADDAHGTAIMLRAEQ 87

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + +  ++         I +D++  T    + +    ++K   D G I +   
Sbjct: 88  MGISAEEQIKRVQQDHEADFADFHIGFDNYYTTHSPENKELSEFIYKACRDSGHIAERSI 147

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE---------- 163
           +  +      +  D            E   G + +   A +NP + +  +          
Sbjct: 148 TQAFDPEKNLFLADRFIKGTCPRCKAEDQYGDNCEACGATYNPTELINPKSAISGATPVE 207

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+L  +++ L  +  S     L     N++  ++++GL++  +SR    +G +
Sbjct: 208 KDSVHYFFKLPDFENMLKEWTRSGT---LQESVANKLNEWLEAGLQEWDISRDAPYFGFE 264

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FHA
Sbjct: 265 IPDAPGKYFYVWLDAPIGYIASFKNLCARRDDLDFDDYWAKDSDAEVYHFIGKDIINFHA 324

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A+   P  V +HGF+   G+K+SKS G  I     +  +  + LRY+   +
Sbjct: 325 LFWPAMLSCADFRTPTAVKAHGFVTVNGKKMSKSRGTFIQARTYLNHLNPEYLRYYFAAK 384

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D   + +   +RVN+D+   + N+ SR    I K +DG +      T S+ ++L
Sbjct: 385 LGNGTEDIDLNLEDFVQRVNSDVVGKVVNIASRCAGFIKKRFDGKLSD----TVSNPALL 440

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                   +I E+ +N    +A+ ++++   + ++Y D QKPW L K             
Sbjct: 441 DEVIAAGDQIAEHFENLEFSKAVREIMAQADKANQYIDEQKPWVLAKEEGRDQDVQDACS 500

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L       L V  E+  +    Q L  G  ++K F P+  R
Sbjct: 501 MGIHLFRVLCTYLKPVLPALVANAETFLNV--ESLNWDDRLQTLT-GHQINK-FKPLMQR 556

Query: 510 F 510
            
Sbjct: 557 I 557


>gi|288926899|ref|ZP_06420799.1| methionine--tRNA ligase [Prevotella buccae D17]
 gi|288336338|gb|EFC74719.1| methionine--tRNA ligase [Prevotella buccae D17]
          Length = 686

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 131/550 (23%), Positives = 248/550 (45%), Gaps = 43/550 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M+++ ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  I
Sbjct: 1   MEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G+T +  VD+  +  ++  +   IS+D + RTT K H       ++K+ D G 
Sbjct: 61  TIRAKKEGITPQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGK 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW-------- 159
           + +     +Y      +  D  +             G   +   +  +P++         
Sbjct: 121 LVEKETEQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTIS 180

Query: 160 ------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  + + ++  L+ YQ  L  +     +   P     +  S++   L+  +++R  
Sbjct: 181 GSKPVVRKTKNWYLPLNDYQGWLKQWILDEHKEWRPNVY-GQCKSWLDMDLQPRAMTRD- 238

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVI 263
            DWGI +P +     ++YVW DA   Y++ T  L + +  K    + W  D     +H I
Sbjct: 239 LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDREPEKWGSWEKWWKDEDTRLIHFI 298

Query: 264 GKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG- 321
           GKD + FH I +P          LP  V ++ F+  + +KIS S    +   E + E+  
Sbjct: 299 GKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLRELPG 358

Query: 322 -VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P  
Sbjct: 359 KQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWDGVVPAC 418

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E D+  +     V +++   +       A  + ++L    ++Y    +PW++ KT+
Sbjct: 419 GELLEVDQQTIHEFKDVQEKVEGYLDAFKFREAQKEAMNLARIGNKYITECEPWKVWKTD 478

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LKPG  L 
Sbjct: 479 PKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSRLGTTDLLKPGHQLA 538

Query: 501 KTFDPIFPRF 510
           +  + +F + 
Sbjct: 539 EP-ELLFEKL 547


>gi|253998809|ref|YP_003050872.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253985488|gb|ACT50345.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 678

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 131/532 (24%), Positives = 225/532 (42%), Gaps = 45/532 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+ 
Sbjct: 6   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEK 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +             + +D++  T    + +    ++ ++   G I     
Sbjct: 66  EGITPEQLIAKVHTEHYADFSGFLVEFDNYYSTNAPENRELASNIYLELKKNGKIATKTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
             ++    + +  D  +             G   +     ++P + +             
Sbjct: 126 EQFFDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTELINPYSAVSGAAPVR 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS   + L  +  S     L  E  N++  +  SGL D  +SR    +G +
Sbjct: 186 KETEHYFFKLSECGEFLQQWTRSGT---LQAEAANKMGEWFASGLSDWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +             ++W AD      H IGKDIL FHA+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMASFKNLCSRLGLDFDEYWKADSKTELYHFIGKDILYFHAL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVRE 332
           +WPA L  +    P ++F+HGF+   GEK+SKS G  I     ++ V   + LRY+   +
Sbjct: 303 FWPATLKYSGHRQPTQIFAHGFLTVNGEKMSKSRGTFITAGSYLQHVKNPEYLRYYYAAK 362

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D   + D    RVN+DL     N+ SR+   I K +DG +        +D +++
Sbjct: 363 LNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLAA-----LADNAVI 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   +    I E    +   RAL ++++L  + + Y     PW++ K          V  
Sbjct: 418 TELRQAASSIAECYNTRDYGRALREIMALADKANGYVAEHAPWDMAKQAGREAELHQVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
             +E+ R L + L+  +PKLA +I   L +A     +  +D  L  G  +  
Sbjct: 478 AALEMFRLLTLYLKPVLPKLAGQIEAFLNIA--VLDWTQVDNALPAGHAIAA 527


>gi|330502374|ref|YP_004379243.1| methionyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916660|gb|AEB57491.1| methionyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 683

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 228/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E +  D+  R+ +L G   ++    D HG  I  
Sbjct: 6   MTEARKILVTSALPYANGSIHLGHMLEYVQTDMWVRYQKLRGNQAIYVCADDAHGSAIML 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D++  T  + + +    ++  + DKG I 
Sbjct: 66  RAEKEGITPEQLIDGVRAEHMADFADFGVDFDNYHSTHSEENRELSASIYLALRDKGHIA 125

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ----------- 158
               + ++      +  D            E   G + +   A ++P +           
Sbjct: 126 TRAVTQYFDPEKGMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYSPTELKNPRSAISGA 185

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E + +FF+L  ++  L  +  S     L     N++  ++  GL++  +SR    
Sbjct: 186 VPVLKESQHFFFKLPDFEAMLKQWTRSGA---LQEAVANKIAEWLDGGLQEWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 243 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCRKRPELDFDAFWGKDSSAELYHFIGKDIV 302

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 303 NFHALFWPAMLEGAGYRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYY 362

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 363 YASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGLLVAANPEPE-- 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
             +          I E  + +   RA+ ++++L    + +   + PW L K    +A   
Sbjct: 421 --LWDAFQAAAPSIAEAYEARDFSRAMREIMALADRANAWIADKAPWALNKVEGKQAEVQ 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + V + RQL I+L+  +PKLA+     L V  +   +  L   L     L+  F+P
Sbjct: 479 EICALGVNLFRQLVIMLKPVLPKLASDAEAFLNVKPQ--TWADLALPL-ANHQLN-PFNP 534

Query: 506 IFPRF 510
           +  R 
Sbjct: 535 LLTRI 539


>gi|187929666|ref|YP_001900153.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309781566|ref|ZP_07676301.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187726556|gb|ACD27721.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308919671|gb|EFP65333.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 710

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 134/544 (24%), Positives = 226/544 (41%), Gaps = 52/544 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 21  MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 79

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C+ ++ K+ + G I 
Sbjct: 80  RAEKEGLTPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENKELCQNVYLKLKEAGLID 139

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 140 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 199

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSR 211
                  E YFF+LS    +  ++       +   E  N++  +     ++ L D  +SR
Sbjct: 200 TPVRKSSEHYFFKLSD--PRCENFLRDWVADLAQPEATNKMREWLGEEGEAKLSDWDISR 257

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGK 265
               +G +IP  P    YVW+DA   Y  +   L    G     W          H IGK
Sbjct: 258 DAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCAKRGLDFDAWINEHSTTEQYHFIGK 317

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDA 324
           DIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + 
Sbjct: 318 DILYFHTLFWPAMLKFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEW 377

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           LRY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +      
Sbjct: 378 LRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVSDAALG 437

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NP 441
                 ++        +I +  + +   +AL  V+ L   V+ + D +KPW+L K   N 
Sbjct: 438 HP----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAFVDTEKPWDLAKDEANR 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           ++      V +E  R LA+ L+  +P    +I   L V  E   ++S+D +L       K
Sbjct: 494 EKLHAACSVALEAFRLLAVYLKPILPTTVERIEAFLNV--EPLTWRSIDSQLSSD----K 547

Query: 502 TFDP 505
              P
Sbjct: 548 PIQP 551


>gi|297538808|ref|YP_003674577.1| methionyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258155|gb|ADI30000.1| methionyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 686

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 134/532 (25%), Positives = 228/532 (42%), Gaps = 45/532 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+ 
Sbjct: 8   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEK 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +D   +          + +D++  T    + +  + +++K+   G I     
Sbjct: 68  EGITPEALIDGVHKEHTADFSEFLVEFDNYYSTNAPENKELSQSIYRKLKANGKIATKII 127

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
             +Y      +  D  +             G   +   A +NP + +             
Sbjct: 128 EQFYDPVKNMFLPDRFIKGECPKCHAKDQYGDSCEVCGATYNPTELINAYSAVSGAAPIR 187

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS  +  L  +  S     L  E  N++  + ++GL D  +SR    +G +
Sbjct: 188 KETEHYFFKLSECEQFLKDWTRSGT---LQGEAANKMGEWFENGLNDWDISRDAPYFGFE 244

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +             ++W  D      H IGKDIL FHA+
Sbjct: 245 IPDAPGKYFYVWLDAPIGYMASFKNLCQAKGLDFDEYWSKDSKTELYHFIGKDILYFHAL 304

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVRE 332
           +WPA L  +    P ++F+HGF+   GEK+SKS G  I     +E +   + LRY+   +
Sbjct: 305 FWPATLEFSGHRKPTQIFAHGFLTVNGEKMSKSRGTFITARSYLEHIKNPEYLRYYYAAK 364

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  +D     D    RVN+DL     N+ SR+   I K +DG +  P A       I 
Sbjct: 365 INSTMEDIDLSLDDFVARVNSDLVGKYINIASRTAGFINKRFDGKL-NPTANNIVVAEIK 423

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +        I E+ + +   +AL +++ L    + +   + PW + K     +    V  
Sbjct: 424 ASAHA----IAESYEAREYGKALREIMRLADIANGFVADKAPWVIAKQEGQDEALQQVCS 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
             +E+ R L + L+  +PKLA +I   L +  E   +Q++   L P   ++ 
Sbjct: 480 DALEMFRLLTLYLKPVLPKLAYEIERFLNI--EPLIWQAVGASLLPAHSINA 529


>gi|241663776|ref|YP_002982136.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865803|gb|ACS63464.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 709

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 225/544 (41%), Gaps = 52/544 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 21  MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 79

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C+ ++ K+ + G I 
Sbjct: 80  RAEKEGLTPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENKELCQNVYLKLKEAGLID 139

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 140 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 199

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSR 211
                  E YFF+LS    +  ++       +   E  N++  +     ++ L D  +SR
Sbjct: 200 TPVRKSSEHYFFKLSD--PRCENFLRDWVADLAQPEATNKMREWLGEEGEAKLSDWDISR 257

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGK 265
               +G +IP  P    YVW+DA   Y  +   L    G     W          H IGK
Sbjct: 258 DAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCAKRGLDFDAWINEHSTTEQYHFIGK 317

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDA 324
           DIL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + 
Sbjct: 318 DILYFHTLFWPAMLKFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEW 377

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           LRY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +      
Sbjct: 378 LRYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVSDAALG 437

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-- 441
                 ++        +I +  + +   +AL  V+ L   V+ + D +KPW+L K     
Sbjct: 438 HP----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAFVDTEKPWDLAKDEAHR 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           ++      V +E  R LA+ L+  +P    +I   L V  E   ++S+D +L       K
Sbjct: 494 EKLHAACSVALEAFRLLAVYLKPILPTTVERIEAFLNV--EPLTWRSIDSQLLSA----K 547

Query: 502 TFDP 505
              P
Sbjct: 548 PIQP 551


>gi|302346007|ref|YP_003814360.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149259|gb|ADK95521.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 687

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 128/551 (23%), Positives = 243/551 (44%), Gaps = 44/551 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVAFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  +D  +   IS+D + RTT + HH      ++K+ D G
Sbjct: 61  ITIRAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSETHHKFASDFFRKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLVEKESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSQPVIKRTKNWYLPLNDYQEWLKQWILEDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L   D       + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEKDPEHFGNWQKWWQDPETRIVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH + +P       +  LP  V S+ F+  + +KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGDYILPDNVPSNEFLNLEDDKISTSKNWAVWLHEYLRDFE 358

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E D   +     V  ++   +       A  + ++L    ++Y    +PW+L KT
Sbjct: 419 CGELEEIDRQTIQEFKDVKAKVEAYLDIFKFREAQKEAMNLARIGNKYIAETEPWKLWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  L+I  + F+P  + K+ +++ + + +         L  G  L
Sbjct: 479 DPKRVETILYISLQLVANLSIAFEPFLPFSSKKLREMINMTEYDWSELGSTDLLPAGKQL 538

Query: 500 HKTFDPIFPRF 510
            +  + +F + 
Sbjct: 539 AEP-ELLFEKI 548


>gi|300114645|ref|YP_003761220.1| methionyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540582|gb|ADJ28899.1| methionyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 674

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 137/537 (25%), Positives = 239/537 (44%), Gaps = 47/537 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF R+ G +  +    D HG  I   AQ 
Sbjct: 3   RRILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMRGHECYYVCADDAHGTPIMLRAQQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  ++Q S+  +       IS+D +  T    +      ++ +  DKG I     
Sbjct: 63  EGITPETLIEQCSQEHQADFADFAISFDSYYSTHSAENRALSETIYLRNRDKGHITTRIV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
              Y    E +  D  +             G + +   A ++P +               
Sbjct: 123 RQAYDPIREMFLPDRFIRGTCPRCNALDQYGDNCEVCGATYSPTELKEAISVLSGTPPIE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS ++  L  + +      L  E  N++  + ++GL+D  +SR    +G  
Sbjct: 183 RESEHYFFKLSDFEPLLKRWTQGG---HLQSEMANKLNEWFEAGLQDWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IPD      YVW+DA   YL +  +L + +G     + A        H IGKDIL FHA+
Sbjct: 240 IPDSTDKYFYVWLDAPIGYLASFKHLCDREGLDFDAFMAPDSTAELYHFIGKDILYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A   LP  +F+HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 300 FWPAMLHGAGFRLPTAIFAHGFLTVNGQKMSKSRGTFIKARTYLNHLNPEYLRYYFAAKL 359

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D   + D    R+NADL   + N+ SR    I K +   +    A   ++ES+  
Sbjct: 360 GSGIEDLDLNFDDFMARINADLVGKVVNIASRCAGFINKHFQNRL----ADRLAEESLFQ 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLY 449
             +   + + ++ +++    A+ ++++L  + +RY D Q+PW   K +P R      V  
Sbjct: 416 KFAAASEHLAQHYESREFGHAMREIMALADQANRYIDEQQPWVAIK-DPARKLEVQEVCT 474

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           + + + RQL I L+  +P  A K        D++  +   D  +     ++  F+P+
Sbjct: 475 LGLNLFRQLIIYLKPVLPVTAEKAEAFFN--DQSLTWTDADTPIL-NHTIN-RFEPL 527


>gi|194246768|ref|YP_002004407.1| methionyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807125|emb|CAP18563.1| Methiony-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 517

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 187/511 (36%), Positives = 289/511 (56%), Gaps = 17/511 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++TAIAY +  PH+G+ YE+++AD LARF RL+G DV F TGTDEHGQKI + +++  
Sbjct: 13  FYLATAIAYASDIPHVGNVYEVVLADFLARFKRLEGYDVYFQTGTDEHGQKIFQKSKSKN 72

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              + +VD  S+  R + D++++SYD FIRT+++ H  + + +  K+  K DIY G Y G
Sbjct: 73  QKPQTYVDYFSQEIRRIYDLMNVSYDKFIRTSDENHKKSVQSVLDKLYQKKDIYLGKYEG 132

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +YS+ +E+Y  + ++  G          N      EE YFF+LS YQ KL  + ++    
Sbjct: 133 FYSVIEESYVLEKDLVNGLTKSGEIPIWN-----SEEVYFFKLSKYQKKLYDFLKNDSVL 187

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P+ ++ E+++ +K  L DL ++R    +GI +  + Q+ +YVW+DAL NY+T   Y  
Sbjct: 188 IRPVNKKQEILNLLKEPLPDLCITRTFCKYGINLNFNSQHFVYVWVDALLNYITGLNYHP 247

Query: 247 NPDGSKA--KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +   SK   K+WP D+H+IGKDI+RFH +++   L+S  LPLPK  F H FIL    K+S
Sbjct: 248 DLPKSKEFLKYWPCDIHIIGKDIIRFHLVHFLILLISLELPLPKIFFVHPFILFDKNKMS 307

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+   ++++   VD +RYF++ EI   +DG    + L++R N DLAN IGNL++R
Sbjct: 308 KSKGNVLYIDDLLKTFSVDTIRYFMLHEIPYNQDGNITHELLRERHNTDLANTIGNLLNR 367

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++ M+    +G +         +  +       L  I++ + N  I  A+  +I L    
Sbjct: 368 TLGMLKAYRNGHLKKVILPEILEIDLSKKSLEALPLIQKKVFNFHISDAIEVIIQLARFS 427

Query: 425 DRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++Y D  KPW L K     D    VLY  +E +R + +LLQ F+P  A  I     +  E
Sbjct: 428 NKYIDLAKPWILFKESDKQDVLDHVLYSLIETLRFIGVLLQPFLPTTAKSILKQ--IKSE 485

Query: 483 NRCFQSLDQRLKPGFMLHKTF---DPIFPRF 510
           N  F SL+     G    KT    + +F RF
Sbjct: 486 NNTFASLEI---FGVTESKTIFSKEILFIRF 513


>gi|78485381|ref|YP_391306.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123728026|sp|Q31GU1|SYM_THICR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78363667|gb|ABB41632.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 680

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 128/543 (23%), Positives = 230/543 (42%), Gaps = 43/543 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ I++A+ Y N   H+GH  E I  D+ ARF ++ G +  +    D HG  I  
Sbjct: 1   MSNTRKILITSALPYANGPIHLGHLVEYIQTDIWARFQKMRGHECYYVCADDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+  +  + + S   +      +I++D +  T    +      ++ ++ ++  I 
Sbjct: 61  RAQAEGIDPEDLIARISEEHQTDFAGFNINFDFYHSTNSPENKHFASYIYTQLKEQNHIS 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
           +     +Y    + +  D  +             G + +   A ++P             
Sbjct: 121 RKTIKQFYDPEKKMFLPDRFIKGTCPKCKTDDQYGDNCEACGATYSPTDLLNPKSAVSGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E +  FF LS ++D L  +        L  +  N++  + +SGL+   +SR    
Sbjct: 181 TPIEKETDHLFFELSHFEDMLKEWTHQG---HLQTQIANKLDEWFESGLRAWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP +     YVW+DA   Y+ +     D       +FW AD      H IGKDI+ 
Sbjct: 238 FGFEIPGEKDKFFYVWLDAPVGYMASFKALCDKTGLDFDEFWKADSTTELYHFIGKDIIY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A    P  +FSHGF+   G+K+SKS G  I     ++ +  + LRY+ 
Sbjct: 298 FHALFWPAMLSGAGFRTPNAIFSHGFLTVDGQKMSKSRGTFIMAKTYLDHLNPEYLRYYF 357

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D     +   +RVN+DL   + N+ SR    + K +DG +    A+++S  
Sbjct: 358 AAKLNSRIDDIDLSLEDFAQRVNSDLVGKVVNIASRCAGFVSKKFDGKLSQ--AWSDSAS 415

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--T 446
           ++        + I    + +   +A+ ++++L  + + Y D   PW L K     A    
Sbjct: 416 TLYQSFIDKSETIANLYEQREYAQAMREIMALADKANEYIDETAPWVLAKQEGKEAELYE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            + + + + R L   L   +P  A K    L V  +   +  ++  LK    + K F  +
Sbjct: 476 SVSLGINLFRVLITYLAPVIPTTAEKAQAFLQV--DTLNWTDINTPLK-DHEITK-FKAL 531

Query: 507 FPR 509
             R
Sbjct: 532 MTR 534


>gi|328865789|gb|EGG14175.1| methionyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 733

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 108/539 (20%), Positives = 217/539 (40%), Gaps = 38/539 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++  DV +R+ RL G + ++  GTDE+G    
Sbjct: 20  IEGQRNILITSALPYVNNVPHLGNIIGCVLSGDVYSRYCRLKGHNCIYICGTDEYGTATE 79

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T K   D+     +++ +  +I +D F RT+ +   +  + ++ K+   G  
Sbjct: 80  TKALQEKCTPKEICDRYHAIHKEIYEWFNIGFDKFGRTSTQSQTEITQDIFMKLHQNGLT 139

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
           +       +  + + +  D  V            +G          NP   ++       
Sbjct: 140 FSDTVEQLFCEQCKIFLADRYVEGICPHCQYEDARGDQCDKCTKLLNPTDLIQPRCKVCS 199

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    + F       + L  +            +N   S+VK  LK   ++R    
Sbjct: 200 TTPIIKSTKHIFLDLPKVQERLDTFVQGSSGKWSENSQNITNSWVKGELKPRCITRD-LK 258

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRF 270
           WG  +P +   + + YVW DA   YL+ T           K  P +   +  +GKD + F
Sbjct: 259 WGTPVPLEEFKEKVFYVWFDAPIGYLSITKEYTKEWEKWWKN-PENVELVQFMGKDNVPF 317

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRY 327
           H + +P+ L+    P      + +  ++ ++  K SKS    +      + ++  D  R+
Sbjct: 318 HTVIFPSSLIGTEDPYTMLHNLSTTEYLNYETGKFSKSRNTGVFGDGARDTKIPADIWRF 377

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L+       D  +  D    +   +L N  GNLV+R +  +  ++DG IP      +SD
Sbjct: 378 YLLSNRPEVSDSVFSWDDFSAKT-LELLNNFGNLVNRVLKFVSVNFDGKIPKID-LNDSD 435

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           +  +   +  ++   E ++   I   L   +++    ++Y    KPWE+ KT+  R    
Sbjct: 436 KKFVQEVNDNVKLYHEALEAVRIKEGLRLAMAISRLGNQYQQENKPWEVIKTDKARCGAS 495

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           + + V  I+ LA L + ++P ++ +I + L            +  +  G  + K   P+
Sbjct: 496 VALLVNTIKLLATLFEPYLPLISQQIHEQLNFESTKYTVG-FEFLIPEGHEISKNITPL 553


>gi|242036495|ref|XP_002465642.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor]
 gi|241919496|gb|EER92640.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor]
          Length = 799

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 116/558 (20%), Positives = 234/558 (41%), Gaps = 56/558 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 13  GRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 72

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T K   D+      ++    +I +D F RT+     + C  ++ K+ +   + +
Sbjct: 73  AMEEKCTPKEICDKYHAIHNEVYKWFNIKFDKFGRTSSPEQTEVCHAIFHKLMENNWLTE 132

Query: 122 GCYSGWYSLRDEAYYNDDEVY------------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
                 Y    + +  D  V             +G   +  +   NP + ++ +    + 
Sbjct: 133 NTMQQLYCDTCQKFLADRLVEGTCPNKACNASARGDQCETCSTLLNPTELIDPKCKVCKN 192

Query: 170 SA-YQDKLLSYYESHPEFILPIERRNE--------------VISFVKSGLKDLSLSRKTF 214
           +   +D    + E        +   NE                +++K GLK   ++R   
Sbjct: 193 TPRIRDTDHLFLELPLLRDKLVNYINETSVAGSWSQNAIQATNAWLKEGLKPRCITRD-L 251

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD + 
Sbjct: 252 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITA-SYTPEWEKWWKNPDNVELFQFMGKDNVP 310

Query: 270 FHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           FH I +P+ LL         K +    ++ ++  K SKS G  +   +  +  +  +  R
Sbjct: 311 FHTIMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPPEVWR 370

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT--P 380
           Y+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD ++P    
Sbjct: 371 YYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSVVPDAPN 430

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            +     +++    S+ +++  + M+   + + L   + + S+ + Y    + W+L K +
Sbjct: 431 ASTHPLTKTLAEKTSKWVEQYLDAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKED 490

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRL------ 493
           P   + V+  +V ++  LA LL+ F+P  ++++   L +  +EN  F      +      
Sbjct: 491 PASCAIVMKTSVGLVYLLACLLEPFMPSFSDEVLRQLNLCPEENLSFSEEKGEIAKAKTP 550

Query: 494 ----KPGFMLHKTFDPIF 507
                 G  + K   P+F
Sbjct: 551 WDFVPAGHKIGKPA-PLF 567


>gi|330811331|ref|YP_004355793.1| Methionine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379439|gb|AEA70789.1| Methionine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 681

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 129/545 (23%), Positives = 228/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFLVDFDNFHSTHAEENRELSSQIYLKLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L ++  S     L     N++  ++ +GL+   +SR    
Sbjct: 181 TPVLKDSQHFFFKLPDFQQMLQAWTRSGT---LQDAVANKIAEWLDAGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD+P    YVW+DA   Y+ +   L N         FW  D      H IGKDI+
Sbjct: 238 FGFEIPDEPGKYFYVWLDAPIGYMASFKNLCNRTPELDFDAFWGKDSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAGNAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ++ L+        I +  +++   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 DAFLA----AAPSIADAYESRDFARAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + + + RQL I L+  +P LA      L VA     +    Q L     L+  F P
Sbjct: 474 AICALGINLFRQLVIFLKPVLPLLAADAEAFLNVAP--LTWND-HQTLLSNHQLNA-FKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|167035308|ref|YP_001670539.1| methionyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|187647754|sp|B0KUD8|SYM_PSEPG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|166861796|gb|ABZ00204.1| methionyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 679

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 126/545 (23%), Positives = 225/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF ++ G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSSLIYTRLREAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  +G++ +  A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVSGDAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 EAFLT----AAPSIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 474 AICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVAP--LTWSDHLSRLE-NHKLN-PFKA 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|157413361|ref|YP_001484227.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157387936|gb|ABV50641.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 514

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 185/509 (36%), Positives = 270/509 (53%), Gaps = 13/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   
Sbjct: 2   TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVMFITGVDEHGLKIQRTANEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   D  S  F +     +IS+D FIRT+ K H       +K++    DIY G   
Sbjct: 62  GIEPKSHCDAISEVFNNNWKDWNISFDKFIRTSSKNHELIVNEFYKRVKASDDIYMGVQK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E    +           ++W  EE  FFRLS YQ   +    + P 
Sbjct: 122 GWYCVGCEEFKDNPE---NSSTYKCPIHQKNLEWKNEENLFFRLSKYQK-EIEKIINEPS 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     
Sbjct: 178 FIEPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSD 237

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                 K    K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+K
Sbjct: 238 ATEHSLKNSINKGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +D  +P     T  +  + +     ++    N  N  +  A  +V+SL  
Sbjct: 358 NRTSSMSRKWFDNKVPN-NEKTLIENKLENFAKIAVENYIYNFDNYKLDLAANEVLSLAI 416

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-V 479
             + Y +  +PW L K   +      ++Y  +E  R + +LL   +P+L+ KI + L  +
Sbjct: 417 NTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSTKINEQLGSI 476

Query: 480 ADENRCF--QSLDQRLKPGFMLHKTFDPI 506
             E   +  Q +   L     L K    I
Sbjct: 477 YKEEFPWKKQLIWGLLVSNTSLPKPTPII 505


>gi|324502781|gb|ADY41221.1| Methionyl-tRNA synthetase [Ascaris suum]
          Length = 930

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 114/546 (20%), Positives = 228/546 (41%), Gaps = 42/546 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K  + + +++A+ Y N  PH+G+    ++ ADV +R+ RL G   L+  GTDE+G    
Sbjct: 26  VKGEKNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYCRLKGWRCLYVCGTDEYGTATE 85

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D      + + +  +I +D F RTT     +  + L+ K+   G  
Sbjct: 86  MKAMQEGLTPQQICDHYYNIHKSIYEWFNIDFDRFGRTTNPHQIELTQDLFLKLHSNGYT 145

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFF- 167
                   +  + + +  D  V+           +G      +   N V+ ++   +   
Sbjct: 146 STDTVDQLHCSKCQRFLADRFVHGECPNCHFDDARGDQCDACSKLINAVELIKPRCHICG 205

Query: 168 -----RLSAYQDKLLSYY----------ESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                + S +    L             +            +   S++K GL+   ++R 
Sbjct: 206 ETPVVKPSKHLFIHLDKLSAEVEKHMNNQLDSNNHWSANAISIARSWIKGGLEKRCITRD 265

Query: 213 TFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDI 267
              WG+ +P       + YVW DA   Y++ T  L     +     PA++   + +GKD 
Sbjct: 266 -LKWGVPVPLPEFQDKVFYVWFDAPVGYMSITKDLVGDAWTSWWKNPAEVELYNFVGKDN 324

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FHA+ +PA  + A  N      + +  ++ ++  K SKS G  +      +  +  D 
Sbjct: 325 VAFHAVMFPASQIGARDNYTTVNHLCATEYLNYEDTKFSKSRGTGVFGDMARDTGIEADV 384

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+      +D  +  D    +VN++L + +GN V+R++S +   + G+IP      
Sbjct: 385 WRFYLLYLRPETQDTSFAWDDFALKVNSELLSNLGNFVNRALSFVAASFGGLIP-EMELG 443

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-- 442
            ++  +L      L E    +    +   +++++ +    ++Y  + +PW L K +    
Sbjct: 444 NAEIELLEAVRSDLSEYDSLLTAVKLRDGISKILQISRRGNQYMQSMQPWVLIKGDEQQK 503

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            RA TV+ V   +   +A+LL  ++P+++ +I +   + D      S    L     + K
Sbjct: 504 KRAGTVIGVAANIAYLIAVLLHPYMPEVSARIREQCGLVDLPLIPASPIAFLPASHKIGK 563

Query: 502 TFDPIF 507
              PIF
Sbjct: 564 P-QPIF 568


>gi|26006502|gb|AAN77311.1| Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 579

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 168/484 (34%), Positives = 267/484 (55%), Gaps = 14/484 (2%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           ++RL    V+F TGTDEHG+KIA +A+  G   K   D  S +++ +   LDI YD FIR
Sbjct: 70  YYRLLDKRVVFITGTDEHGEKIATSAEACGRNPKDHCDTISNSYKMLWADLDIEYDKFIR 129

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           TT+++H       + ++ D GDIY+  Y G Y +  E Y ++ E+    + +       P
Sbjct: 130 TTDRKHEAVVNDFYSRVLDSGDIYRADYEGLYCVSCEEYKDEKELG---ENKCCPVHLKP 186

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               +E+ YFF LS YQ +L      +P F+ P  R NEV  +VKSGL+D S+SR + +W
Sbjct: 187 CVPRKEDNYFFALSKYQHQLEDLLTKNPNFVRPSHRLNEVQGWVKSGLRDFSISRASVEW 246

Query: 217 GIKIPDDPQYIMYVWIDALTNYLT---TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           GI +P+D +  +YVW DAL  Y++     G   +   +  + WPA LH+IGKDILRFHA+
Sbjct: 247 GIPVPNDTKQTIYVWFDALLGYISALLDDGEKASLQQAVERGWPASLHLIGKDILRFHAV 306

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           YWPA L+SA + +P  VF HGF+   G K+ KSLGN ++P +++   GVD++RYF +RE+
Sbjct: 307 YWPAMLMSAGISVPDAVFGHGFLTKDGMKMGKSLGNTLEPKDLVNRFGVDSVRYFFLREV 366

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G DG Y ++     VNA LAN IGNL++R++ ++ K+    +           S+   
Sbjct: 367 EFGNDGDYSEERFINIVNAHLANTIGNLLNRTLGLLKKNCKSTLAFDSIAAADGISLKDN 426

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYV 450
              ++ + ++  +N L+  A   ++ + +  + Y D Q PW   K    + ++A+  L +
Sbjct: 427 VENLVDKAKDQFENLLLSSACETLMEIGNLGNLYIDEQAPWSCFKQGGESAEKAAKDLVI 486

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN----RCFQSLDQRLKPGFMLHKTFDPI 506
            +E +R +AI L    P L+ +I+  L   ++     R   +    LK G ++ +   P+
Sbjct: 487 ILETMRIIAIALSPITPSLSLRIYTQLGFTEDQFRTLRWEDTKWGGLKAGQVMMEP-KPV 545

Query: 507 FPRF 510
           F R 
Sbjct: 546 FARI 549


>gi|116754198|ref|YP_843316.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694646|sp|A0B7K2|SYM_METTP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116665649|gb|ABK14676.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 669

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 132/541 (24%), Positives = 243/541 (44%), Gaps = 41/541 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + + + ++  + Y N   HIGH    + AD+  R  R  G DVLF  G+D HG  I   
Sbjct: 3   TDNDPILVTCGLPYANGPAHIGHLRTYVPADIFVRALRRMGHDVLFICGSDAHGTPIVVN 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A++ G++ +  V+   ++F D+   +++ +D F  T +  +H   + + + + ++G +Y 
Sbjct: 63  AESRGMSPRELVEFYHKHFEDVFRSINVRFDYFGCTDDPSNHHRTQEIVRALMERGHVYP 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNP 156
                 Y  R E +  D  V                                        
Sbjct: 123 KEIELAYCPRCERFLPDRYVEGICPYCGVPARGDECDQGCGRHLEPGEIKDAVCKVCGTR 182

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            ++ ++  YFFRLSA+++ LL Y             RN  + +V+  LKD  ++R    W
Sbjct: 183 AEYRKQTHYFFRLSAFREFLLDYL---QRLGGTASARNYALEWVRQELKDWCITR-NMSW 238

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHA 272
           G+K P     ++YVW+DA   Y++ T       G   + +       +H IG DI+  H 
Sbjct: 239 GVKFPGSEDLVVYVWVDAPIGYISFTEEWCKAHGVPWERYWRGKSRIIHFIGGDIVYHHC 298

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLV 330
           I+WPA L  A   LP  V + G +    +K SKS G V+   +  + + +  D LRY+L 
Sbjct: 299 IFWPAMLEGAGYTLPSDVVASGMLKIDDKKFSKSRGYVVWVKDDYLDQGLEPDYLRYYLA 358

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              +  K+  +    L+++VN +L    GN ++R+V+  +K++DG +P      E D  +
Sbjct: 359 SYTSHTKEVNFSWKILQEKVNTELVGAFGNFLNRAVTFAVKNFDGKVPE----GELDPEV 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +      + ++  ++      RA   V+SL    + YF + +PW+L +++   A +VL  
Sbjct: 415 MKRIEMSVGDVSSSLMEYEFKRASDAVLSLADYANTYFQSHEPWKLIRSDRRAAGSVLRN 474

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +++++ + IL++ F+P      +  L +   ++  F+   Q +  G  L  T   +F R
Sbjct: 475 CLQMVKAMIILMEPFMPSRMAVAWKQLGMESLDDIQFRDAVQPIPEGHPLG-TPKILFSR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|330957740|gb|EGH58000.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 682

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 129/542 (23%), Positives = 228/542 (42%), Gaps = 41/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFAGFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++      +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKNMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDTMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   GM+    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGMMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKTFD 504
            + + + RQL I L+  +P LA      L VA    D+++    ++ +L P   L    D
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTL-LVNHQLNPFSALMTRID 535

Query: 505 PI 506
           P+
Sbjct: 536 PL 537


>gi|242062646|ref|XP_002452612.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor]
 gi|241932443|gb|EES05588.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor]
          Length = 802

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 116/559 (20%), Positives = 231/559 (41%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      
Sbjct: 16  GRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETK 75

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+  +  + C+ ++ K+ +   + +
Sbjct: 76  AMEEKCSPKEICDKYHAIHNEVYKWFDIKFDKFGRTSSPQQTEICQAIFHKLMENNWLTE 135

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                 Y      +  D  V              +G      +   NP + ++ +    +
Sbjct: 136 NTMQQLYCDTCRRFLADRLVEGTCPIEGCTNKAARGDQCDNCSHMLNPTELIDPKCKVCK 195

Query: 169 LSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            + +  +    +               ++    +          +++K GLK   ++R  
Sbjct: 196 NTPHIRETDHLFLDLPLLEGKLVNYINDTSVAGMWSQNAIQATNAWLKEGLKSRCITRD- 254

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 255 LKWGVPVPIEKYKDKVFYVWFDAPIGYVSITASYTPEWEQWWKN-PDNVELFQFMGKDNV 313

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH I +P+ LL         K +    ++ ++G K SKS G  +   +  +  +  +  
Sbjct: 314 PFHTIMFPSTLLGTGENWTMMKTISVTEYLNYEGGKFSKSKGIGVFGNDAKDTNIPPEVW 373

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTP- 380
           RY+L+       D  +    L+ ++N++L N +GN ++R +S I K     YD +IP   
Sbjct: 374 RYYLLMNRPEASDTLFTWTDLQAKLNSELLNNLGNFINRVLSFIAKPVGAGYDSIIPDAP 433

Query: 381 -GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                 S   I    S+ +++  + M+   + + L   + + ++ +RY    + W+L K 
Sbjct: 434 GAESHPSTSDIAEKVSKSVEQYLDAMEKVKLKQGLKSAMGISTDGNRYLQESEFWKLYKD 493

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF----------QS 488
           NP   + V+  +V ++  LA LL+ F+P  + ++   L +  +E   F          ++
Sbjct: 494 NPANCAIVMKTSVGLVYLLACLLEPFMPSFSKEVLRQLNLSPEETLSFSEEKGESAKAKT 553

Query: 489 LDQRLKPGFMLHKTFDPIF 507
               +  G  + +   P+F
Sbjct: 554 PWDLVPAGHKIGRPV-PLF 571


>gi|321469650|gb|EFX80629.1| hypothetical protein DAPPUDRAFT_318233 [Daphnia pulex]
          Length = 773

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 121/547 (22%), Positives = 225/547 (41%), Gaps = 40/547 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 50  VEGERNILITSALPYVNNFPHLGNIIGCVLSADVFARYCRLRNYNTLYICGTDEYGTATE 109

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+  +   ++    DIS+D F RTT        + ++ K+     +
Sbjct: 110 TKALEEGLTPQQICDKYFKLHDEVYKWFDISFDHFGRTTTPNQTKIAQDIFLKLHRNNYL 169

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +           + +  D  V            +G          N V+         R
Sbjct: 170 VEDTMEQLLCQHCKIFLADRFVEGTCPLCGYEDARGDQCDKCGKLVNAVELKLPRCKMCR 229

Query: 169 LS-------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            +                +  L+ +            R    S++K GLK   ++R    
Sbjct: 230 HTPVIKTSKHLFLDLPKIEDKLTSWMESVTAGWTHNARVIANSWIKEGLKPRCITRD-LK 288

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGKDILRFH 271
           WG  +P +     + YVW DA   YL+ T           K     +H   + KD + FH
Sbjct: 289 WGTPVPLEGYTDKVFYVWFDAPIGYLSITACYTEKWERWWKNREQVVHYEFMAKDNVPFH 348

Query: 272 AIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           ++ +P+  L  + P      + +  ++ ++  K SKS G  +      E  +  D  R++
Sbjct: 349 SVVFPSSQLGTHDPYTLVNHLIATEYLNYEDGKFSKSRGVGVFGNNAQETGIPADVWRFY 408

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+      +D  +    L  + N +L N +GN  +R++S + K+YD  +P+     + + 
Sbjct: 409 LLYVRPESQDSTFSWADLMTKNNTELLNNLGNFANRALSFLEKNYDSCVPS-MTLGQEEN 467

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDRA 444
            +L   +R L++    ++N  +  A+  + S+    ++   A +PW L K        RA
Sbjct: 468 MLLVRINRELKQYISLLENAKLRDAIRPIFSISRLGNQLMQAAQPWVLIKSTKDEEKKRA 527

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLKPGFMLHKTF 503
            TV+ +   +I QL+++L  ++P L+ K+ + L V +D N        RL  G  + K  
Sbjct: 528 GTVIGLCANIICQLSVMLLPYMPNLSGKLQEQLGVTSDVNHLIPEFTCRLPAGHRIGKPA 587

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 588 -PLFQKI 593


>gi|328869504|gb|EGG17882.1| methionyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 640

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 174/499 (34%), Positives = 271/499 (54%), Gaps = 19/499 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y NA PHIGH Y  ++AD   R+++L G      TGTDEHG K+ +AA+    
Sbjct: 101 YITTPIFYVNASPHIGHLYTALLADAACRWNKLKGFPTFLVTGTDEHGTKVQEAAKKNNQ 160

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            T  + D  S  F+ + ++ +I  +D+IRTT+ RH  +   +W ++   G IYKG Y GW
Sbjct: 161 NTLQYCDSISSTFKQLFELANIEMNDYIRTTQDRHKKSVHCIWDQLIKSGHIYKGRYEGW 220

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQH-------NPVQWMEEEGYFFRLSAYQDKLLSYY 180
           Y   DEA+  ++++      +             NPV +  EE Y F+LSA+++++  + 
Sbjct: 221 YCTSDEAFLTEEQIEDKVINEKTKETIKVSKESGNPVVFTVEENYMFKLSAFKEQIKEWL 280

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY 238
            + P  I P  R ++V++ +  GL+DLS+SR     +WGI++P D    +YVW+DALTNY
Sbjct: 281 VATPNPITPASRVSQVLNALD-GLRDLSVSRPSSRVEWGIRVPGDDSQTIYVWLDALTNY 339

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY +  D      +  + H+IGKDI++FH +YW AFL +    LP +V +H     
Sbjct: 340 LTVAGYPNQTDPLSVWNYNVE-HLIGKDIIKFHTVYWVAFLSAIGAKLPSRVVAHAHWTV 398

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +  K+SKSLGNVIDP + IE+ GVD +RYFL+R      DG +    +  ++N DLA+  
Sbjct: 399 ERVKMSKSLGNVIDPFKTIEQFGVDPIRYFLLRCGGMENDGDFSTLEVISKLNNDLADTY 458

Query: 359 GNLVSRSV--SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           GNLVSRS   S++  +     P+       D+ +++  + +   I +          L  
Sbjct: 459 GNLVSRSSSGSLLPTNTFPTRPSDNDLLPIDKDLINSINNLKGHIEDKFDRYDFKGGLED 518

Query: 417 VISLVSEVDRYFDAQKPWEL------KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +I  +  V++YF    PW L      K  +  R + V+Y+  E IR   +LL + +P+ A
Sbjct: 519 IIEFLYTVNKYFVEIAPWTLVPKPGKKAGDLVRLNNVMYIIFESIRVSTLLLSSIIPQSA 578

Query: 471 NKIFDILFVADENRCFQSL 489
            K+ D L +  ++R F  L
Sbjct: 579 VKVLDHLSIPPKDRSFDQL 597


>gi|268536458|ref|XP_002633364.1| C. briggsae CBR-MRS-1 protein [Caenorhabditis briggsae]
 gi|187034452|emb|CAP26269.1| CBR-MARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 921

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 114/548 (20%), Positives = 221/548 (40%), Gaps = 43/548 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      
Sbjct: 33  GKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETK 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G T +   D+     + + +   I +  F RTT     + C+ ++ K+   G    
Sbjct: 93  ALQEGCTPRELCDKYHAIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFLKLHKNGFTTT 152

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                 +  + + +  D  V            +G          N V+  + + +  + +
Sbjct: 153 QTVDQLFCNQCDKFLADRFVTGTCPNCAYDDARGDQCDGCGKLINAVELKDAKCHMCKST 212

Query: 171 A--------------YQDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSRKT 213
                           Q+  +       +        N      S+   GL+   ++R  
Sbjct: 213 PEVKQSTHIFLSLDKLQESTMDLIMKQMDLPGSKWSANAKGITKSWENQGLEPRCITRD- 271

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +   + + YVW DA   YL+ T  +   D +K    P+++   + +GKD +
Sbjct: 272 LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPSNVELYNFVGKDNV 331

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   + A  N  +   + +  ++ ++  K SKS G  I         +  D  
Sbjct: 332 AFHGVMFPCSQVGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFGDAAQRTGIPADIW 391

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G+IP     TE
Sbjct: 392 RFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANFFGGVIPNMD-LTE 450

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN---PD 442
           +D +IL    +   +         +  A+  ++++    ++Y  +Q PW L K +     
Sbjct: 451 ADATILEEIHQECLQWDTQFDGVRLKDAVKSILNVSRIGNQYMQSQTPWVLMKGDDAAKK 510

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           RA T++ V   +   LA++L   +P ++  I     ++            LKPG  + K 
Sbjct: 511 RAGTIIGVAANIAYHLAVILYPVMPSVSETIRQQCDLSKLPLFSPFPRNYLKPGHKIGKP 570

Query: 503 FDPIFPRF 510
             P+F + 
Sbjct: 571 -SPLFQKL 577


>gi|299771390|ref|YP_003733416.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701478|gb|ADI92043.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 688

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 230/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPVSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++         PD +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLNFDDFWKKDSQNDVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLDGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A  E    
Sbjct: 359 SKLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINSSFNNTLSAECAEPE---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIASAYEAREFSLAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++   L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAEQVQGFLKL--ESFNFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|253996891|ref|YP_003048955.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983570|gb|ACT48428.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 690

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 129/532 (24%), Positives = 229/532 (43%), Gaps = 45/532 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RFH++ G  V +    D HG  I   A+ 
Sbjct: 8   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFHKMQGHHVHYVCADDTHGTPIMLRAEK 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +    +          + +D++  T    + +  + ++KK+   G I     
Sbjct: 68  QGITPEALIANVHKEHAADFSEFLVQFDNYYSTNAPENKELSQSIYKKLKAAGKISTKTI 127

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
             +Y      +  D  +             G   +   A +NP + +             
Sbjct: 128 EQFYDPVKNMFLPDRFIKGECPKCHAKDQYGDSCEVCGATYNPTELINAYSAVSGATPVR 187

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS  +  L  +  S     L  E  N++  + ++GL D  +SR    +G +
Sbjct: 188 KETEHYFFKLSECEQFLRDWTRSGT---LQGEAANKMGEWFENGLNDWDISRDAPYFGFE 244

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +     +       ++W  D      H IGKDIL FHA+
Sbjct: 245 IPDAPGKYFYVWLDAPIGYMASFKKLCETIGLDFDEYWQKDSKTELYHFIGKDILYFHAL 304

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVRE 332
           +WPA L  +    P ++F+HGF+   GEK+SKS G  I     +E +   + LRY+   +
Sbjct: 305 FWPATLEYSEHRKPTQIFAHGFLTVNGEKMSKSRGTFITARSYLEHIKTPEYLRYYYAAK 364

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  +D   + +    RVN+DL     N+ SR+   I K ++G +        ++  ++
Sbjct: 365 LNSTMEDIDLNLEDFVARVNSDLVGKYINIASRTAGFINKRFEGKLNPS-----ANNPVI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +        + E+   +   +AL +++ L    + +   + PW + K     A    V  
Sbjct: 420 AEIKASAATLAESYSEREYSKALREIMRLADVANGFVAEKAPWVMAKQEGQDAALQQVCS 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
             +E+ R L + L+  +PKLA +I   L +A     + ++   L P   ++ 
Sbjct: 480 DALEMFRLLTLYLKPVLPKLAGEIEQFLNIAP--LTWDAVANSLLPQHAINA 529


>gi|187649785|sp|A5VZI8|SYM_PSEP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 679

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 224/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSSLIYSRLREAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  +G++    A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGDAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPSIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 474 AICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVAP--LTWNDHLTRLE-NHTLN-PFKA 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|212635626|ref|YP_002312151.1| methionyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212557110|gb|ACJ29564.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit [Shewanella piezotolerans WP3]
          Length = 697

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 131/543 (24%), Positives = 229/543 (42%), Gaps = 48/543 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 23  SQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKA 82

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q  +         +I +D+F  T  + + +    ++ K+ D G I   
Sbjct: 83  QQMGIAPEEMIAQVQKEHEKDFADFNIQFDNFHSTHSEENRELASEIYVKLRDSGYIKTK 142

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +      +  D            E   G +     A ++                
Sbjct: 143 TISQLFDPEKSMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLLNPYSAVSGATP 202

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L A++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 203 VMKDTEHFFFDLPAFEGMLKEWINSGS---LQQEMANKLSEWFEQGLQQWDISRDAPYFG 259

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+ F
Sbjct: 260 FEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSKDSTAEVYHFIGKDIVYF 319

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 320 HSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 379

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K +DG +        +D S
Sbjct: 380 AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAK-----IADSS 434

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           +        + I    + +   +A+ ++++L    + Y     PW+L K     + A  V
Sbjct: 435 LTDCFVAKQETIANLYETREYGKAMREIMALADVANAYVADAAPWQLIKDEAKQEEAHQV 494

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA  +   L +      + +++  L  G  + K F  + 
Sbjct: 495 CSNALNLFRILVTYLKPVLPKLAADVETFLKME---LTWDNINADL-AGHEIAK-FKALM 549

Query: 508 PRF 510
            R 
Sbjct: 550 QRI 552


>gi|26554387|ref|NP_758321.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26454397|dbj|BAC44725.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 1087

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 173/515 (33%), Positives = 276/515 (53%), Gaps = 10/515 (1%)

Query: 5    EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +K YI+T I YP+  PHIGHA+  +IADVL R+ +  G +  F TG DEHGQKI + A+ 
Sbjct: 569  KKFYITTPIYYPSGNPHIGHAFTTLIADVLTRYKKKLGYETFFITGMDEHGQKIEEKAKE 628

Query: 65   AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              +  +  VD+ ++ F ++  +L I Y  FIRTT + H +  +  + ++  K  IY G +
Sbjct: 629  LNLKPQELVDKYAKVFDNLWKLLGIEYSHFIRTTAEYHKNVVQETFSELLKKDFIYLGVW 688

Query: 125  SGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
             G Y +  E  Y  +  V K  D + Y AQ +P+   EEE YF ++  ++  + S+ +  
Sbjct: 689  KGLYCVSCEENYTKNIAVRKENDDKLYCAQLHPLIQKEEESYFLKIKQFKKYISSFLKD- 747

Query: 184  PEFILPIERRNEVISFV--KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            P  + PI R NE+ +         DLS+SR  F WGI+I ++P++++YVW+DAL NYL+ 
Sbjct: 748  PNLVYPITRINELFNSFLNNDDFDDLSISRSNFSWGIQIKENPKHVVYVWLDALLNYLSG 807

Query: 242  TGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
             GY    D +  KFW +     + ++ K+I RFH IYWP  L    L  P K  SHG+I+
Sbjct: 808  LGYRQKDDSNFQKFWNSQDAEIVQLMSKEITRFHCIYWPIMLEMLGLRKPTKYISHGWII 867

Query: 298  HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             +  K+SKSLGNV+DPI  I   G DA RY+L++E++  +D  + +  L    N DLAN 
Sbjct: 868  TEQGKMSKSLGNVLDPIYFINTYGRDAFRYYLLKELSLKEDSVFSEKLLINTFNKDLANN 927

Query: 358  IGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNL +RS+ MI K  DG+IP       S +        +   EI   ++   I + L++
Sbjct: 928  VGNLFNRSIGMINKYRDGIIPKYSKPKLSFNIEFEKQLKQFDDEITTIIEKLNIQKILSR 987

Query: 417  VISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            VI L++E + + +  KPW+LKK N ++     L + +  ++++   L+  +   + +   
Sbjct: 988  VIDLINECNFFIEQVKPWDLKKENNEKDLDCFLSLILNAVKRVIYYLEPVLIDGSKEALK 1047

Query: 476  ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               +       + +            T +PI+ R 
Sbjct: 1048 QFNIDSSKFDIKFVTDFSSLDNQKINTPEPIYLRI 1082


>gi|313497463|gb|ADR58829.1| Methionyl-tRNA synthetase [Pseudomonas putida BIRD-1]
          Length = 679

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 225/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSSLIYSRLREAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWNEGSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  +G++ +  A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVSGDAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPSIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 474 AICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVAP--LTWNDHLTRLE-NHPLN-PFKA 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|221211555|ref|ZP_03584534.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168916|gb|EEE01384.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 722

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 131/547 (23%), Positives = 230/547 (42%), Gaps = 48/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +++     +   D   +S+D+F  T  + +      ++  + D G I +
Sbjct: 75  AEKEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSKHYFFRLSD--PRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGIDFDAWIRAGSSAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                  V++E  R L++ L+  +P++A  +     +A     +    + L     + K 
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAP--LAWADAAKPLSSAQPI-KA 545

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 546 YQHLMTR 552


>gi|198284383|ref|YP_002220704.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666133|ref|YP_002427048.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226695270|sp|B7J7Y5|SYM_ACIF2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695271|sp|B5ENA8|SYM_ACIF5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|198248904|gb|ACH84497.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518346|gb|ACK78932.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 678

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 129/537 (24%), Positives = 224/537 (41%), Gaps = 42/537 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + ++ I++A+ Y N   H+GH  E    D+ AR+ RL G D ++    D HG  I   AQ
Sbjct: 2   KRRILITSALPYANGPIHLGHLVEYTQTDIWARYQRLRGHDCVYVCADDAHGTPIMLRAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G+T +  + +   +         I +D +  T    + +  + +++ +     I    
Sbjct: 62  SEGITPEELITRMHGDHLRDFTGFGIRFDLYHSTHSPENFEISQSIYRALRAADYINVRE 121

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------Q 158
               Y      +  D  +             G   +   A ++P               +
Sbjct: 122 IEQAYDPVAGIFLPDRFIRGTCPRCGAADQYGDSCEVCGATYSPTDLINPVSAVSGAVPE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E YFF+L  + D L  +  S     L  E  +++  +   GL D  +SR    +GI
Sbjct: 182 RRNSEHYFFQLGDFSDFLRRWIHSGT---LQEEVAHKLDEWFSIGLSDWDISRDAPYFGI 238

Query: 219 KIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
            IPD P    YVW+DAL  Y+  T  +      + A +W  D      H IGKDI+ FH 
Sbjct: 239 PIPDAPGKFFYVWLDALPGYMAATQHWCAAHGRNLADYWGPDSAAEIYHFIGKDIIYFHG 298

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +   LP  +F+HG +   G K+SKS G  I   + ++ +  + LRY++  +
Sbjct: 299 LFWPAMLKGSGHRLPTGIFAHGHLTVNGAKMSKSRGTSITARQYLQHLNPEFLRYYIATK 358

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D   + +    R N DL   + NL SR+   I + + G      A    D++  
Sbjct: 359 LNSHVEDIDLNLEDFLLRGNGDLVGKVVNLASRAAGFIHRSFAG---RLAASLGKDQAFY 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLY 449
               +  + I E    +   +A+  +++L  +++ Y D   PW L K     +    V+ 
Sbjct: 416 DGLLQTQEAIGEAYAGREYGKAMRDIMALADQINAYVDQNAPWTLAKDPAQHESLHRVVT 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTFD 504
           VT+   R L  LL   +P+L+ K  + L    +        LD ++ P   L +  +
Sbjct: 476 VTLNGFRVLITLLSPVLPELSRKALEFLQCELDWAGLSKPLLDHQILPYSHLLQRME 532


>gi|325860413|ref|ZP_08173525.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482071|gb|EGC85092.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 687

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 239/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  GVT +   D+  +  +D  +   IS+D + RTT   H+      ++K+ D G
Sbjct: 61  ITIRAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLVEKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTI 180

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ  L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSQPVIRKTKNWYLPLNNYQKWLKQWILEDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + D  +    + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH + +P          LP  V ++ F+  +  KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFE 358

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D   +     V +++   ++      A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELHDVDRQAIQEFKDVKEKVEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+L ++++++  L+I  + F+P  + K+  ++ + + +         L  G  L
Sbjct: 479 DPKRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTEYDWSELGSTDLLPAGKQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|158291055|ref|XP_312573.4| AGAP002383-PA [Anopheles gambiae str. PEST]
 gi|157018191|gb|EAA07531.4| AGAP002383-PA [Anopheles gambiae str. PEST]
          Length = 563

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 175/522 (33%), Positives = 274/522 (52%), Gaps = 22/522 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL----DVLFTTGTDEHGQKIAKAAQ 63
           +++T I Y NA PHIGH Y  +IAD + RF+++       D   +TGTDEHG KI +AA 
Sbjct: 19  FVTTPIFYVNAAPHIGHLYSSVIADAIHRFNQITRPAESGDCFLSTGTDEHGLKIQQAAI 78

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               +T+ + D  S  +R++ D   I Y  FIRTT+  H    +  W+ ++    IY   
Sbjct: 79  KHSTSTEDYCDAISTKYRELFDRFQIDYSRFIRTTDTDHRQAVQAFWRSLAASDSIYSAS 138

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           YSGWY + DE +  D ++ +   G+ Y+ +  +PV+W EEE Y FRLS YQD +  + + 
Sbjct: 139 YSGWYCVPDETFLTDSQLKENERGEKYSLESGHPVEWTEEENYMFRLSRYQDDVRHWVKG 198

Query: 183 -HPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYL 239
                I P +    ++ +++  L D+S+SR      WG+ +P DP   +YVW+DAL NYL
Sbjct: 199 LEGRRIQPDKFGRILLDWLEEPLPDISISRPMNRVSWGVPVPSDPSQSVYVWLDALVNYL 258

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY      ++   WP  + V+GKDIL+FH IYWPAFLL+A +  P+++  H      
Sbjct: 259 TVAGYPKESFRTR---WPPTVQVLGKDILKFHGIYWPAFLLAAQIEPPRQLLVHSHWTVD 315

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS  NV+DP E  E    + LRYFL+RE     DG Y    + + +N++LA+ +G
Sbjct: 316 NQKMSKSKQNVVDPNERAELYTYEGLRYFLLREGVAHSDGNYSDTKVLRILNSELADTLG 375

Query: 360 NLVSRSVSMILKDYDGMIPTP----GAFTESD--ESILSVCSRVLQEIRENMQNQLIHRA 413
           NL+SR     L              GA  E D  + +L     +  +   + +N   +  
Sbjct: 376 NLLSRCCGKALNAESIFPAVDREALGALKEIDATKRMLEALEEMPDKASSHYKNYNFYLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +  ++ L+   + +F+   PW+LKK+    +  + +T+L VT+EV+RQ  I  Q  VP L
Sbjct: 436 VDTIVHLLHTANNFFETTAPWKLKKSDNPADRAKLNTILSVTMEVLRQAGIAAQPIVPGL 495

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPG-FMLHKTFDPIFPRF 510
           + ++ D L +    R +  L    +     L +    +F R 
Sbjct: 496 SKQLLDKLQIVPTARRWNDLQVSFRTQDATLAQDECILFRRI 537


>gi|297800908|ref|XP_002868338.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314174|gb|EFH44597.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 798

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 119/557 (21%), Positives = 225/557 (40%), Gaps = 55/557 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 15  GKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETK 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T K   D+     +++ D  DIS+D F RT+     + C+ ++KK+ D   + +
Sbjct: 75  ALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQAIFKKLWDNKWLSE 134

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    + +  D  V              +G   +      NP +  + +     
Sbjct: 135 NTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQ 194

Query: 165 --YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L   +   E                     ++++ GL+   ++R  
Sbjct: 195 NTPRIRDTDHLFIELPLLKDRLEKYINETSVAGSWSQNAIQTTNAWLRDGLRQRCITRD- 253

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +   + + YVW DA   Y++ T      +  K    P ++     +GKD +
Sbjct: 254 LKWGVPVPHEKYKEKVFYVWFDAPIGYVSITS-CYTSEWEKWWKNPENVELYQFMGKDNV 312

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+  L         K +    ++ ++  K SKS G  +   +V +  + V+  
Sbjct: 313 PFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVEVW 372

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N +L N +GN V+R +S I K     Y  +IP   
Sbjct: 373 RYYLLTNRPEVSDTSFSWTDLQAKLNGELLNNLGNFVNRVLSFIAKPNNAGYGSVIPDAH 432

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                   +S+     + + E  E M+   + + L   + + SE + Y    + W+L K 
Sbjct: 433 DAESHPLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNFYLQTSQFWKLYKE 492

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---------ENRCFQSLD 490
           +    + V+     ++  LA LL+ F+P  + ++F  L +           E        
Sbjct: 493 DKPLCAIVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQFSLSDERGEVLLASKPW 552

Query: 491 QRLKPGFMLHKTFDPIF 507
           + L P   +  T  P+F
Sbjct: 553 EILPPSHRIG-TAQPLF 568


>gi|114047230|ref|YP_737780.1| methionyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944730|sp|Q0HVY2|SYM_SHESR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113888672|gb|ABI42723.1| methionyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 676

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 127/546 (23%), Positives = 233/546 (42%), Gaps = 54/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      +I++D++  T  + +      ++ K+   G I  
Sbjct: 63  AQQLGMAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSGA---LQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            +        ++I E  + +   +A+ ++++L    + +     PW+L K +   + A  
Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA---NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           V    + + R L   L+  +P+LA      F           + SL Q +  G  +   F
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLALDVEAFFQQ------TLTWDSLGQDM-AGHEI-APF 526

Query: 504 DPIFPR 509
             +  R
Sbjct: 527 KAMMQR 532


>gi|304312862|ref|YP_003812460.1| Methionyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798595|emb|CBL46825.1| Methionyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 707

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 131/544 (24%), Positives = 224/544 (41%), Gaps = 42/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +   + +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I  
Sbjct: 7   VPQSRDILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKMRGANCHYVCADDAHGTAIML 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G T +  + Q             I +D++  T    +     +++ +  DKG I 
Sbjct: 67  KAEQLGRTPEEQIAQVKVEHERDFAGFLIGFDNYYSTHSPENRHFSELIYARNRDKGYIV 126

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE------ 163
               +  +    + +  D  V             G + +   A +   +           
Sbjct: 127 AREITQLFDPEKQMFLADRFVKGTCPKCGADDQYGDNCEVCGATYPAQELKNPRSTISGA 186

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                     FF L  +Q  L  +  S     L     N++  ++ +GL+   +SR+   
Sbjct: 187 TPVLKANTQLFFDLPRFQAMLEKWIRSGT---LQEGIANKLEEWLSAGLQQWDISREAPY 243

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L    G      +W  D      H IGKDI+
Sbjct: 244 FGFEIPDHPGKYFYVWLDAPIGYMASFKNLCERRGDLDFDHYWRKDSTAELYHFIGKDII 303

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A+   P  + SHGF+   G+K+SKS G  I     +  +  + LRY+
Sbjct: 304 SFHGLFWPALLTGADFRTPTAICSHGFVTVNGQKMSKSRGTFIKAETYLRHLTPEYLRYY 363

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   +RVNADL N + NL SR    I K  +G +       +  
Sbjct: 364 FAAKLGSRIDDIDLNLEDFVQRVNADLVNKVINLASRCAGFIQKKSNGRLSAAPLRDDVA 423

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            S+L        EI E+ + +   +A+  +++L    ++Y D QKPW L K        V
Sbjct: 424 YSLLQDFMEAGTEIGEHYEQREFSKAIRNIMALADRANQYIDEQKPWALAKDPQQDTQVV 483

Query: 448 --LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
               V + + R L I L+  +P+L+ ++   L +      +Q     L+   +L   F P
Sbjct: 484 QICSVGLNLFRLLMIYLKPVLPQLSVEVEAFLAIP--ALRWQDHRHLLQDHSIL--PFKP 539

Query: 506 IFPR 509
           +  R
Sbjct: 540 LMQR 543


>gi|118587914|ref|ZP_01545324.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118439536|gb|EAV46167.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 517

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 177/509 (34%), Positives = 278/509 (54%), Gaps = 11/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI+T I Y N  PHIGHA+  ++AD+L R  +  G D++ +TG DEHGQK  +AA+  
Sbjct: 13  KSYITTPIYYVNGSPHIGHAFTSVMADILKRNRQALGYDMMLSTGVDEHGQKNQEAAEKE 72

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ + ++D     FR + D LD++YD F+RT+ + H      + + I DK  I K  Y+
Sbjct: 73  GMSVEDYLDMRCAEFRAVFDRLDVAYDYFVRTSREGHKTAVAGMEQSIFDKDLIVKKNYT 132

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +  + ++    DGQ        V+  EE  YF ++  ++ +LL +   +P+
Sbjct: 133 GTYCKGCEEFKKESDLT--EDGQCPLHPTMKVEQTEETNYFLKMEPFRARLLQHIADNPD 190

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           F+ P   +NE+   +   L+DL +SR       GI++P D +++ YVW DAL NYLT   
Sbjct: 191 FVQPEAFKNELKQMLSEPLEDLCISRPKARVTLGIELPFDTEFVTYVWFDALANYLTNIN 250

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEK 302
           + +    S   +W    H+IGKDIL+ H +YWP  L++A LPLPKK+  H   +   G K
Sbjct: 251 WPEEGYES---WWAECEHLIGKDILKPHGVYWPIMLMAAGLPLPKKLSVHSHWVGAGGVK 307

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS+GNV+DPIEVIE++GVDALR++L R +    D     D + +  N +L N IGNL+
Sbjct: 308 MSKSIGNVVDPIEVIEKLGVDALRWYLARHMRADSDSQISVDFITQSYNTELGNKIGNLL 367

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR+       +DG +P PG  +  DE+I        + + E +    I   +  +I++  
Sbjct: 368 SRAAKFSKARFDGKLPAPGPLSPEDEAIRKSVLEATKGMGEWINLAEIPARVQSIITVAD 427

Query: 423 EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           E++ YF  Q PW+L K     +R  TV+YVT++ +R +   L   +P  A K   +L   
Sbjct: 428 EMNNYFAEQAPWDLIKNEETRERCQTVIYVTLDSLRIVMEALTQVIPASAGKALAMLNAP 487

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                ++    RL+    L +  + ++PR
Sbjct: 488 AVASPWKPELDRLEGNSDLGE-IETLYPR 515


>gi|154150363|ref|YP_001403981.1| methionyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|187647736|sp|A7I6H7|SYM_METB6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|153998915|gb|ABS55338.1| methionyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 662

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 129/541 (23%), Positives = 233/541 (43%), Gaps = 44/541 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +  L ++  + Y N   H+GH    + AD   R+ R  G +V+F +G+D HG  I  +A
Sbjct: 2   TKPPLLVTCGLPYTNGPCHLGHLRTYVPADCYVRYMRRTGEEVVFVSGSDNHGTPIVVSA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G T +   +Q  R+F +    + +S+D F  T +   H   + + +++ D G +YK 
Sbjct: 62  EEQGTTPRALSEQYHRHFDETFRRMGVSFDHFGMTDDPACHHRTQDIVQRLVDNGYVYKQ 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPV 157
             +  Y  + + +  D  V                                         
Sbjct: 122 VVNQAYCPKCKRFLPDRYVEGICPYCGKQARGDECDQGCGKHLEPGEIKDPVCKICGTKA 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           ++  +E YF +LSA++D LL +             RN  I ++K  L D  ++R T +WG
Sbjct: 182 EFRNQEHYFLKLSAFRDYLLPFL---DNLKGTSNARNYAIGWIKDELHDWCITR-TLEWG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAI 273
           +K P     ++YVW+DA   Y+  T      +G   K +W  D    H IG DI+  H I
Sbjct: 238 VKFPGRDDLVVYVWVDAPIGYIAFTEEWAKENGRDWKRYWCKDNRVTHFIGGDIIYHHCI 297

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVR 331
           +WP  L  A    P  V + G +     K SKS G V+   +  + + +  D LRY+L+ 
Sbjct: 298 FWPGLLKGAGYGEPYAVVASGMVKVDDHKFSKSRGYVVWTNDDYLDKGLPADCLRYYLLA 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  K+  +      +R+N ++ N +GN + R++    K++ G+          D +IL
Sbjct: 358 YTSHTKELNFSWKVFGERINNEVVNILGNFLYRTLFFAHKEFGGVPG-----GSVDPAIL 412

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +   +  + + + MQ      A+  V+ L +  + Y     PW+L KT+   A+ V+   
Sbjct: 413 AEIEKCQKSVDDQMQAYEFKGAVDTVMGLAAFGNTYIQTNAPWKLIKTDRAAAAQVIKNG 472

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHKTFDPIFPR 509
           +++ + L +L++  +P  A + +  L   D       +D+   + P   +     P+F R
Sbjct: 473 IQIAKALCLLIEPVMPVKAQECWAQLGYID-RVAAHRVDEGVVIVPERQIPAPA-PLFAR 530

Query: 510 F 510
            
Sbjct: 531 L 531


>gi|288803454|ref|ZP_06408886.1| methionine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334064|gb|EFC72507.1| methionine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 687

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 128/551 (23%), Positives = 242/551 (43%), Gaps = 44/551 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVAFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  +D  +   IS+D + RTT + HH      ++K+ D G
Sbjct: 61  ITIRAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSETHHKFASDFFRKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLVEKESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSQPIIKRTKNWYLPLNDYQEWLKQWILEDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L   D       + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEKDPEHFGNWQKWWQDPETRIVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH + +P       +  LP  V S+ F+  + +KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGDYILPDNVPSNEFLNLEDDKISTSKNWAVWLHEYLRDFE 358

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E D   +     V  ++   +       A  + ++L    ++Y    +PW+L KT
Sbjct: 419 CGELEEVDRQTIQEFKDVKAKVEAYLDIFKFREAQKEAMNLARIGNKYIAETEPWKLWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY +++++  L+I  + F+P  + K+ +++ + + +         L  G  L
Sbjct: 479 DPKRVETILYFSLQLVANLSIAFEPFLPFSSKKLREMINMTEYDWSELGSTDLLPAGKQL 538

Query: 500 HKTFDPIFPRF 510
            +  + +F + 
Sbjct: 539 AEP-ELLFEKI 548


>gi|198452215|ref|XP_001358678.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
 gi|198131835|gb|EAL27820.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
          Length = 588

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 169/502 (33%), Positives = 265/502 (52%), Gaps = 23/502 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA N 
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPAADVRLCTGTDEHGTKIQQAAANH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    +  + S  +R++     I  DDFIRTTE+RH       W+ +  +G IY   YS
Sbjct: 81  KVPVDQYCQEISSRYREVFQAAHIHNDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQD-DVRHWVKQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +P D    +YVW+DAL NYL++
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDDSQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +         WP    VIGKDIL+FH IYWPAFLL+A L  P++++ H      G+
Sbjct: 260 LGYPNE---EFLNHWPPAQQVIGKDILKFHGIYWPAFLLAAGLQPPQQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y      + +N+++A+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSEMADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P P     +D        + +     ++ +    + +    H  
Sbjct: 377 LSRACAKSL-NPRQVYPQPHVEHLADLLRSVDAAKRLRDSLLQLSERCEAHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ +PWELK      N  R +T++ +T++ +R   I+LQ  +P+L
Sbjct: 436 ADTTMAALHAANNFFESARPWELKTGNEGANEPRLATIIAMTMDALRLCGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           A ++ D L V    R +  L++
Sbjct: 496 ATRLLDKLSVPASQRGWDCLNE 517


>gi|77460728|ref|YP_350235.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123603456|sp|Q3K7L0|SYM_PSEPF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77384731|gb|ABA76244.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 683

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 129/545 (23%), Positives = 226/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +    ++ K+ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFLVDFDNFHSTHAEENRELSSQIYLKLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
           +   + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 QRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q+ L ++  S     L     N++  ++ +GL+   +SR    
Sbjct: 181 TPVLKDSQHFFFKLPDFQEMLQAWTRSGT---LQDAVANKIAEWLDAGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L N         FW  D      H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCNRTPELDFDAFWGKDSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  +  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIQKGNAGLLVDTNAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I +  + +   RA+ + ++L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPSIADAYEARDFARAMRETMALADRANAWIADKAPWSLNKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V    + + RQL I L+  +P LA      L VA     +      L     L++ F P
Sbjct: 474 AVCATAINLFRQLVIFLKPVLPVLAADAEAFLNVAP--LTWND-HTTLLANHQLNE-FKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|117920207|ref|YP_869399.1| methionyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|187647774|sp|A0KW24|SYM_SHESA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117612539|gb|ABK47993.1| methionyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 676

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 126/546 (23%), Positives = 234/546 (42%), Gaps = 54/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      +I++D++  T  + +      ++ K+   G I  
Sbjct: 63  AQQLGMAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSGA---LQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKHPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFVQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--AST 446
            +        ++I E  + +   +A+ ++++L    + +     PW+L K +  +  A  
Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQETAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLA---NKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           V    + + R L   L+  +P+LA      F           + +L+Q +  G  +   F
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLALDVEAFFQQ------TLTWDALNQDM-AGHEI-APF 526

Query: 504 DPIFPR 509
             +  R
Sbjct: 527 KAMMQR 532


>gi|123968528|ref|YP_001009386.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123198638|gb|ABM70279.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 514

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 167/458 (36%), Positives = 251/458 (54%), Gaps = 10/458 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  II D +AR+ RL G +V+F TG DEHG KI + A   
Sbjct: 2   TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   D+ S  F +     +IS+D FIRT+ K H       ++++    DIY G   
Sbjct: 62  GIPPKSHCDEISEIFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E    +           ++W  EE  FFRLS YQ   +    + P 
Sbjct: 122 GWYCVGCEEFKDNPE---NSSTYKCPIHQKNLEWKNEENLFFRLSKYQK-EIEKIINEPS 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     
Sbjct: 178 FIEPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSD 237

Query: 246 DNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                 +      WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+K
Sbjct: 238 ATEHSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++++ G D +R++L+++I+ G DG +        +N DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPDLLLKKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +D  +P     +  ++ + +     ++    N  N  +  A  +V+SL  
Sbjct: 358 NRTSSMSRKWFDNKVPNNEKISSENK-LENYAKIAVENYIYNFDNYKLDLAANEVLSLAI 416

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQL 458
             + Y +  +PW L K   +      ++Y  +E  R +
Sbjct: 417 NTNLYLNDNQPWVLIKEKDNLPLVKEIIYNVLESTRII 454


>gi|238898868|ref|YP_002924550.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511559|sp|C4K759|SYM_HAMD5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229466628|gb|ACQ68402.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 545

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 134/541 (24%), Positives = 242/541 (44%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   A+ 
Sbjct: 6   KKILVTCALPYANGPIHLGHMLEHIQADIWVRYQRMRGHEVYFICADDAHGTAIMLKAEK 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           +G+  +  +++ ++  ++      ISYD +  T    + +    +++++  KG I K   
Sbjct: 66  SGINPEKMIEEINQQHQNDFSGFLISYDHYYSTHSDENRELSVAIYQRLKAKGHIKKRAI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
           S  Y    + +  D  V             G + +   + ++  +               
Sbjct: 126 SQLYDPEKKLFLPDRFVKGTCPKCQAPNQYGDNCEACGSTYSSTELIAPKSEVSGATPVI 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+   L  +  S     L  +  N++ +++ SGL+   ++R T  +G +
Sbjct: 186 RESEHFFFDLPAFTGMLTQWIHSGA---LQEQVANKMQTWLTSGLRQWDITRDTPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y+           + S  +FW  D      H IGKDI+ FH+
Sbjct: 243 IPDAPDKYFYVWLDAPIGYMGSFKNFCDKKENVSFDEFWQTDTKTELYHFIGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  ++   P  +F HG+I   G K+SKS G  I+  + ++ +  D LRY+   +
Sbjct: 303 LFWPAVLEGSDFRKPTNLFVHGYITVNGAKMSKSRGTFIEASDYLKHLDPDCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +RVNADL N + NL +R+ S I K + G++        +D  + 
Sbjct: 363 LSSHIDDIDLNLEDFVQRVNADLVNKVVNLAARNASFINKKFAGILSK----ELADSELY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449
               +    I      +   +A+ ++++L    +RY D Q PW L K   +  +  +V  
Sbjct: 419 FTFVQAGLRIANAYHARETSKAIREIMALADLANRYVDEQAPWVLAKKEVDEAKLQSVCS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R L   L+  +P L+ +    L        + S+++ L       K F  +F R
Sbjct: 479 MGIHLFRILMTYLKPVLPALSERSEAFLNTE---LTWDSINEPLL--NHEIKPFKALFNR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|225433588|ref|XP_002269672.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 807

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 119/562 (21%), Positives = 238/562 (42%), Gaps = 59/562 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G    
Sbjct: 19  IQGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATE 78

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+     +++    +IS+D+F RT+  +  + C+ ++KK+ +   +
Sbjct: 79  TKAMEEKCTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLMENNWL 138

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYF 166
            +      Y  + + +  D  V              +G   +      NP++  +    F
Sbjct: 139 SENVMQQLYCDKCQKFLADRLVEGICPTQDCNYDSARGDQCEKCGKLLNPIELKDPRCKF 198

Query: 167 FRLSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              + +       +                                +++K GLK   ++R
Sbjct: 199 CHSTPHIRDTNHLFLELPLLKDKLEEYINLMSVAGSWSQNAIQATHAWLKEGLKPRCITR 258

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     PD  K    P ++     +GKD
Sbjct: 259 D-LKWGVPVPHEKFKDKVFYVWFDAPIGYVSITS-CYTPDWEKWWKNPENVELYQFMGKD 316

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVD 323
            + FH + +P+ LL    N  L K +    ++ ++  K SKS G  +   +  +  + V+
Sbjct: 317 NVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVE 376

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +    L+ ++N++L N +GN ++R +S I K     Y  +IP 
Sbjct: 377 VWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFIAKPAGLGYGSVIPD 436

Query: 380 P--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                  +  +++     R +++  E M+   + + L   +S+ SE + Y    + W+L 
Sbjct: 437 APGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 496

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR----- 492
           K +    S V+  ++ ++  LA LL+ F+P  + ++   L +  E   F   D++     
Sbjct: 497 KEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPET-SFLLCDEKGDIER 555

Query: 493 -------LKPGFMLHKTFDPIF 507
                  +  G  +  T +P+F
Sbjct: 556 AKRPWEIVPAGHRIG-TPEPLF 576


>gi|330889575|gb|EGH22236.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 682

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 125/542 (23%), Positives = 219/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYE-----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  ++           L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWRRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWVLAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++  D R   G      F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWE--DHRTLLGNHQLNPFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|323343515|ref|ZP_08083742.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095334|gb|EFZ37908.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 687

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 132/551 (23%), Positives = 244/551 (44%), Gaps = 44/551 (7%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+++  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  
Sbjct: 1   MEQKNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVIFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +  VD+     +   +   IS+D + RTT + HH+     ++K+ D G
Sbjct: 61  IMIRARKEGITPQDVVDRYHSLIKKSFEDFGISFDIYSRTTSETHHNLASDFFRKLYDNG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +     +Y      +  D  +             G   +   +  +P++ ++     
Sbjct: 121 KLIEKETEQYYDEEAHQFLADRYIVGECPHCHNDHAYGDQCERCGSDLSPMELIDPHSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+  L  +              +  S++   L+  +++R 
Sbjct: 181 SGSKPIIKKTKNWYLPLNEYQEW-LKQWILEDHQEWRSNVYGQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD-----LHV 262
             DWGI +P D     ++YVW DA   Y++ T  L         K + W  D     +H 
Sbjct: 240 -LDWGIPVPVDGADGKVLYVWFDAPIGYISNTKELCDREPQKWGKWETWWKDEDTRLVHF 298

Query: 263 IGKDILRFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +P          LP  V ++ F+  + +KIS S    +   E + ++ 
Sbjct: 299 IGKDNIVFHCLIFPVMLKAHGGYILPDNVPANEFLNLENDKISTSRNWAVWLHEYLADLP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N +L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTKKYFNGIVPV 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E D   LS    V Q++   +       A  + ++L    +RY    +PW++ KT
Sbjct: 419 CGELLEVDRQALSEFKNVKQDVETLLDAFKFRDAQKEAMNLARIGNRYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  LAI  + F+P  + K+  ++ +             L+PG  L
Sbjct: 479 DPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKMINLDRFEWNQLGSTDLLQPGHAL 538

Query: 500 HKTFDPIFPRF 510
            +  + +F + 
Sbjct: 539 AEP-ELLFEKI 548


>gi|313200895|ref|YP_004039553.1| methionyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312440211|gb|ADQ84317.1| methionyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 696

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 131/532 (24%), Positives = 224/532 (42%), Gaps = 45/532 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+ 
Sbjct: 20  RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVHYVCADDTHGTPIMLRAEK 79

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +             + +D++  T    + +    ++ ++   G I     
Sbjct: 80  EGITPEQLIAKVHTEHYADFSGFLVEFDNYYSTNAPENRELASNIYLELKKNGKIATKTI 139

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
             ++    + +  D  +             G   +     ++P + +             
Sbjct: 140 EQFFDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYSPTELINPYSAVSGAAPVR 199

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+LS   + L  +  S     L  E  N++  +  SGL D  +SR    +G +
Sbjct: 200 KETEHYFFKLSECGEFLQQWTRSGT---LQAEAANKMGEWFASGLSDWDISRDAPYFGFE 256

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +             ++W AD      H IGKDIL FHA+
Sbjct: 257 IPDAPGKYFYVWLDAPIGYMASFKNLCSRLGLDFDEYWKADSKTELYHFIGKDILYFHAL 316

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVRE 332
           +WPA L  +    P ++F+HGF+   GEK+SKS G  I     ++ V   + LRY+   +
Sbjct: 317 FWPATLKYSGHRQPTQIFAHGFLTVNGEKMSKSRGTFITAGSYLQHVKNPEYLRYYYAAK 376

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D   + D    RVN+DL     N+ SR+   I K +DG +         D +++
Sbjct: 377 LNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLAA-----LVDNAVI 431

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   +    I E    +   RAL ++++L  + + Y     PW++ K          V  
Sbjct: 432 TELRQAASSIAECYNMRDYGRALREIMALADKANGYVAEHAPWDMAKQAGREAELHQVCT 491

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
             +E+ R L + L+  +PKLA +I   L +A     +  +D  L  G  +  
Sbjct: 492 AALEMFRLLTLYLKPVLPKLAGQIEAFLNIA--VLDWTQVDNALPAGHAIAA 541


>gi|302184711|ref|ZP_07261384.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 682

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 224/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IP++P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPEEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAALRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNSGVMVETNAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKTLLANHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|298205165|emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 119/562 (21%), Positives = 238/562 (42%), Gaps = 59/562 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G    
Sbjct: 19  IQGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATE 78

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+     +++    +IS+D+F RT+  +  + C+ ++KK+ +   +
Sbjct: 79  TKAMEEKCTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLMENNWL 138

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYF 166
            +      Y  + + +  D  V              +G   +      NP++  +    F
Sbjct: 139 SENVMQQLYCDKCQKFLADRLVEGICPTQDCNYDSARGDQCEKCGKLLNPIELKDPRCKF 198

Query: 167 FRLSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              + +       +                                +++K GLK   ++R
Sbjct: 199 CHSTPHIRDTNHLFLELPLLKDKLEEYINLMSVAGSWSQNAIQATHAWLKEGLKPRCITR 258

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     PD  K    P ++     +GKD
Sbjct: 259 D-LKWGVPVPHEKFKDKVFYVWFDAPIGYVSITS-CYTPDWEKWWKNPENVELYQFMGKD 316

Query: 267 ILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVD 323
            + FH + +P+ LL    N  L K +    ++ ++  K SKS G  +   +  +  + V+
Sbjct: 317 NVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVE 376

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +    L+ ++N++L N +GN ++R +S I K     Y  +IP 
Sbjct: 377 VWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFIAKPAGLGYGSVIPD 436

Query: 380 P--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                  +  +++     R +++  E M+   + + L   +S+ SE + Y    + W+L 
Sbjct: 437 APGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 496

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR----- 492
           K +    S V+  ++ ++  LA LL+ F+P  + ++   L +  E   F   D++     
Sbjct: 497 KEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPET-SFLLCDEKGDIER 555

Query: 493 -------LKPGFMLHKTFDPIF 507
                  +  G  +  T +P+F
Sbjct: 556 AKRPWEIVPAGHRIG-TPEPLF 576


>gi|226953520|ref|ZP_03823984.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226835737|gb|EEH68120.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 721

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 230/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 34  RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 94  NGISPEAQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 153

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 154 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPRSTLSGATPVE 213

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +        LP+   N++  + ++GL D  +SR    +G 
Sbjct: 214 K-SSDHYFFKLPNFSEYLQEWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGF 270

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            S   FW  D      H IGKDI+ F
Sbjct: 271 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 330

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 331 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 390

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  + +  A  E    
Sbjct: 391 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPE---- 446

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I +  + +    A+ ++++L  + ++Y D +KPW L K          V
Sbjct: 447 LVQSFIDAGDSIAQAYEAREFSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVHDV 506

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLAI L   +P LA ++   L +  E+  F S  Q L     + + F P+ 
Sbjct: 507 CSVGINLFRQLAIYLAPVLPTLAAQVQSFLQL--ESFDFASRQQILVA-HEIAQ-FQPLM 562

Query: 508 PR 509
            R
Sbjct: 563 QR 564


>gi|225449565|ref|XP_002279143.1| PREDICTED: similar to AT3g55400/T22E16_60 [Vitis vinifera]
          Length = 555

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 166/514 (32%), Positives = 249/514 (48%), Gaps = 70/514 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA AA   G
Sbjct: 70  FVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLSGKKVIFITGTDEHGEKIATAAAACG 129

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            +     D  S+ ++ +   LDI+YD FIRTT  +H    +  + ++   GDIY+  Y  
Sbjct: 130 SSPSEHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDIYRADY-- 187

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
                              +G Y                                     
Sbjct: 188 -------------------EGLYCINCEE------------------------------- 197

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
                   +V S++KSGL+D S+SR + DWGI +P+D +  +YVW DAL  Y++     +
Sbjct: 198 -------YKVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSEDN 250

Query: 247 NPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                ++     WPA LH+IGKDILRFHA+YWPA LLSA L LPK VF HGF+   G K+
Sbjct: 251 EQPDLQSAVSSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSLPKMVFGHGFLTKDGMKM 310

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGN ++P ++++  G DA+RYF +RE+  G DG Y +D     VNA LAN IGNL++
Sbjct: 311 GKSLGNTLEPNDLVQRFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLANTIGNLLN 370

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R++ ++ K+    +           +      +++++ +   +N  +  A   V+ + + 
Sbjct: 371 RTLGLLKKNCQSTLAVDSTLAAEGNAFKDTVDKLVEKAKFQYENLSLSSACEAVLEIGNA 430

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVT---VEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + Y D + PW L K     +          +E +R +AI L    P+L+ +I++ L   
Sbjct: 431 GNLYIDERAPWSLFKQGAAASEAAAKDLVIILEAMRIIAIALSPVTPRLSLRIYEQLGYT 490

Query: 481 DENRCFQSL----DQRLKPGFMLHKTFDPIFPRF 510
            E     +        LK G  +     P+F R 
Sbjct: 491 KEQFNATTWSETEWGGLKSG-QVMAQPKPVFARI 523


>gi|20905283|gb|AAM30563.1| Methionyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 749

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 128/539 (23%), Positives = 231/539 (42%), Gaps = 42/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N + HIGH    + AD+ AR  + +G +V F  G+D HG  I   A+ 
Sbjct: 45  KPVLVTCGLPYANGKAHIGHLRTYVPADIYARSLKKEGREVTFVCGSDTHGTPIVVNAEE 104

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T    V+   ++F +    L I +D F  T +  +H+    +  ++ +KG +Y    
Sbjct: 105 LGITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEKGYVYPKII 164

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y      +  D  V                                       P ++
Sbjct: 165 EIAYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEY 224

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            ++E +FF+LS + + L+ Y     +        N    +VK GL D  ++R   +WG+K
Sbjct: 225 RQQEHFFFKLSEFSNYLMDYLS--KDLGGTTNAINYARGWVKQGLTDWCITR-NLEWGVK 281

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T  +      S  KFW  D   +H IG DI   H I+W
Sbjct: 282 FPGHEDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGDGEIVHFIGGDITYHHCIFW 341

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A+  +P  V + G +  +  K SK+ G V+   E  +      D LRY+L    
Sbjct: 342 PAMLKGADYSVPTAVVASGMVKIEDRKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYT 401

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  K+  +    L++++NA+L   +GN + R++    K+Y  +             I   
Sbjct: 402 SHTKELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEVPEGEVEPE-----IRKE 456

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + L E++  M+     +A+   ++L S  + YF + +PW+L K + D    V+Y  + 
Sbjct: 457 IEKALVEVKAAMEEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRDACGQVVYNCLH 516

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + L+++ +  +P+   K +  L    +     ++     LK G  L K  + +F + 
Sbjct: 517 LAKALSLIFEPVIPQTMEKAWKGLGHESDIHAALYEETLVPLKAGTKLAKP-EILFTKL 574


>gi|309356566|emb|CAP36935.2| hypothetical protein CBG_19783 [Caenorhabditis briggsae AF16]
          Length = 1232

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 183/490 (37%), Positives = 279/490 (56%), Gaps = 18/490 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62
           Y+++ I Y NA+PHIGHAY  ++ D   R+++L          LF+ GTDEHG KI +A+
Sbjct: 14  YVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSIGTDEHGSKIFQAS 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q AG T K F DQ S  F  + D L+IS+ +FIRTT+ +H ++ +  W+ + D+G IYK 
Sbjct: 74  QLAGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHFWRVLQDRGHIYKS 133

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSG+YS+ +E +  ++EV + A+           V+W+EEE Y FRLS +++K+  + E
Sbjct: 134 SYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFRLSEFREKVGEWIE 193

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                     +   + S    G   +S +RK   WGI +PDDP   +YVW+DAL NYLT 
Sbjct: 194 KTDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTIYVWLDALVNYLTV 253

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +GY           WP    VIGKDI +FH  YWPAFL++A+LPLP++VF HG  L    
Sbjct: 254 SGYP-----KDRLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVHGHWLVDNV 308

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P   I++   + LRYFL+++     D  +  +   + VN+DL N +GNL
Sbjct: 309 KMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSDLVNNVGNL 368

Query: 362 VSR-SVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           ++R +V  I K   Y   +       E  E +L +     ++  E   +   ++ + Q++
Sbjct: 369 LNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYYYKGIEQLM 428

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + E +R F   +PW+  +T+ +R  ++L+VT E IR ++ILLQ   PK+AN   D L 
Sbjct: 429 LTMKEANRVFQLSQPWK--ETDSERLESLLFVTYETIRIVSILLQPITPKMANFCLDRLG 486

Query: 479 VADENRCFQS 488
           V  + R  +S
Sbjct: 487 V--DQRNLES 494


>gi|161524036|ref|YP_001579048.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351203|ref|YP_001946831.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|226710899|sp|A9AHJ8|SYM_BURM1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|160341465|gb|ABX14551.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335225|dbj|BAG44295.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 722

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 131/547 (23%), Positives = 229/547 (41%), Gaps = 48/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +++     +   D   +S+D+F  T  + +      ++  + D G I +
Sbjct: 75  AEKEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSKHYFFRLSD--PRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L +  G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAGSSAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                  V++E  R L++ L+  +P++A  +     +A     +    + L     + K 
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAP--LAWADAAKPLSSAQPI-KA 545

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 546 YQHLMTR 552


>gi|296242227|ref|YP_003649714.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094811|gb|ADG90762.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 503

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 255/481 (53%), Gaps = 13/481 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             YI+T I YPN  PHIGHAY  + ADVLARF RL   DV F TG DEHG KI + A+  
Sbjct: 3   TFYITTPIYYPNGPPHIGHAYTTVYADVLARFARLIEKDVFFLTGNDEHGLKIQRFAEKL 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G T K  VD+ +  +RD    L+ISYD FIRTT+  H       ++K+  KG +YK  Y 
Sbjct: 63  GKTPKEVVDEMAVIYRDYWLRLNISYDYFIRTTDSVHEKVVMSSFEKLYRKGYVYKDKYG 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y +  E YY   E  +     Y    + P++++EEE Y+F+LS ++D LL    ++  
Sbjct: 123 GLYCVDCEKYYLPGEYVEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLEVLRNNKI 182

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                     +    K GL+DLS++R      WG+K+P DP Y++YVW DAL NY+T  G
Sbjct: 183 VYPEEYSLEVISRIEKEGLRDLSIARPVERVSWGVKVPFDPNYVIYVWFDALLNYITGAG 242

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y  + +    K+W    HV+GKDIL FH   W + L   ++P PKKV  H F+++KG KI
Sbjct: 243 YATDLER-FEKYWANVHHVVGKDILWFHTAIWFSILKGLDIPPPKKVIVHAFLINKGLKI 301

Query: 304 SKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
            KS GNVI   +++    G D +RY L R     KD     + +    N +LA+  GNL+
Sbjct: 302 GKSAGNVISIDDLLARYNGPDGVRYILSRVFNMSKDSEVSFELMDAIYNDELADTYGNLI 361

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++ +K   G I       E D+ +       +    E M+N  +  A+ +++ L+ 
Sbjct: 362 RRVGALAIKKLRGKIYR----REVDKKLSEQIMVKMGNYLERMKNYDVPGAIIEIMDLLR 417

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           E + Y +  +PWE  K +P +    LY  +E+IR   I L   +P +A+K+ D      E
Sbjct: 418 EGNAYVNNTRPWE--KEDPSKE---LYGLLELIRVSTIALAPVIPSVASKVADEFGFKIE 472

Query: 483 N 483
           N
Sbjct: 473 N 473


>gi|193215432|ref|YP_001996631.1| methionyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|226710901|sp|B3QT85|SYM_CHLT3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|193088909|gb|ACF14184.1| methionyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 700

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 139/560 (24%), Positives = 245/560 (43%), Gaps = 53/560 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++TA+ Y N   H+GH A   + AD+  RF RL G DV+   G+DEHG  I 
Sbjct: 1   MSQYKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRFKRLKGEDVIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GV+ +V VD+      +      IS+D + RT+   HH+T +  +  I  KG  
Sbjct: 61  LTADKEGVSPQVVVDRYHNRNSEAFAKCGISFDHYGRTSSPVHHETAQEFFLDIEKKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ---------HNPVQW--- 159
            K     +Y      + +D  V           A+G                NP      
Sbjct: 121 TKKVEKQFYDEESRHFLSDRYVTGTCPVCGNPDANGDQCEKCGTYLSANELINPKSKLTG 180

Query: 160 -----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E   ++F L  +Q KL  + E H +        N   ++++ GL D +++R   
Sbjct: 181 KTPILKETLHWYFPLGRFQKKLEDFIEGHAKTWRQ-NVINYSRTWLRQGLGDRAITRD-L 238

Query: 215 DWGIKIPDD----PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVI 263
            WG+K+P +       ++YVW DA+  Y+++T             K +        +H I
Sbjct: 239 PWGVKVPLEGEEAKDKVLYVWFDAVLGYISSTKEWAAKQGQPDLWKTYWQSPETRLIHFI 298

Query: 264 GKDILRFHAIYWPAFLL------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           GKD + FHA+ +PA L+       A   L   V +  F+  +G+K SKS    +   E +
Sbjct: 299 GKDNVVFHALMFPAILMAKNENADAQYVLVDNVPASEFMNFEGKKFSKSRNYAVYLHEFL 358

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+   D LRY L       +D  +     + R N +LA+ +GN V R+V      + G +
Sbjct: 359 EKFPADTLRYSLAINYPESRDTDFSWKDFQNRTNGELADTLGNFVKRAVDFTNSKFQGEV 418

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P      + + ++        ++  E ++N  I  A    +      +RY    +PW++ 
Sbjct: 419 PAECTIEDWN-ALGEGWHGGFKKYEEALENFHIREACFTAMDFARFANRYLTESEPWKVI 477

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKP 495
           KT P++A+ ++ + + +   LA +    +P+ + KIFD+L V++  + +  ++L +++K 
Sbjct: 478 KTEPEKAAKIMAMALNLCETLATVFAPILPETSAKIFDMLGVSEAAQAKVGENLFEKVKA 537

Query: 496 -----GFMLHKTFDPIFPRF 510
                G  L    + +F + 
Sbjct: 538 PQLAKGHKLSGKSEILFRKI 557


>gi|124003887|ref|ZP_01688735.1| methionyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990942|gb|EAY30409.1| methionyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 707

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 147/561 (26%), Positives = 254/561 (45%), Gaps = 54/561 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ ++  I+ A+ Y N   HIGH A   I AD+ AR+ RL G DV+F +G+DEHG  +  
Sbjct: 4   KKHKRHIITAALPYANGAAHIGHLAGVYIPADIYARYLRLKGEDVMFVSGSDEHGVPVTI 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  VD+  +  RD       ++D + RT+ + HH+T +  + K+  +G + 
Sbjct: 64  RAEKEGVTVQQVVDKYDQVIRDSFKEFGFTFDVYSRTSRQIHHETSQEFFLKLHAEGKLQ 123

Query: 121 KGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP------------------- 156
           K     ++    + +  D          G D  Y +   N                    
Sbjct: 124 KKVSQQFFDPTAQRFLADRLIIGTCPKCGNDNAYGDQCENCGSTLSPDELIDPRSTLSNA 183

Query: 157 -VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            ++  E E ++  L  Y+D L  +     +         +  S++ SGL   +++R   D
Sbjct: 184 ALEKKETEHWYIPLDQYEDWLKDWILDSHKDDWKTNVYGQCKSWLDSGLHPRAVTRD-LD 242

Query: 216 WGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNP-------DGSKAKFWPAD----LHV 262
           WGI   +P+    +MYVW DA   Y++ T             D    K+W ++    +H 
Sbjct: 243 WGIQVPLPNSEGKVMYVWFDAPIGYISATKEYFKEKAPDGSLDEEWKKYWQSEDSKLVHF 302

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH I +P+         LP+ V ++ F+  + EKIS S    +   E + E  
Sbjct: 303 IGKDNIVFHCIMFPSMLKAHGEYVLPENVPANEFMNLEDEKISTSRNWAVWLHEYLREFE 362

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIP 378
              D LRY L  +     D  +  +G +KR N +LA+ +GN V R V++  K Y   + P
Sbjct: 363 GKQDVLRYALTADAPETSDSNFTWEGFQKRNNNELADNLGNFVRRPVALTHKYYGGVVPP 422

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                TE D++++   +   ++I + ++      ALAQV+ L    ++Y     PW L K
Sbjct: 423 LNDNLTEDDQALIDALAAYPKKIGKAIEEYKFREALAQVMDLSRMGNQYLQKTSPWLLYK 482

Query: 439 TNPD----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQ 491
            + +    R  T+L+++++V   LA+L + F+P  A K+ ++L     N     +Q++  
Sbjct: 483 EDKEKHAQRIETILHLSLQVAANLALLCEPFLPFTAEKLRNMLNRPAWNPNCMTWQAMGG 542

Query: 492 --RLKPGFMLHKTFDPIFPRF 510
              +  G  + K    +F + 
Sbjct: 543 IDIINAGQTIEKAI-VLFEKI 562


>gi|33865756|ref|NP_897315.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|33632926|emb|CAE07737.1| putative methionyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 514

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 178/512 (34%), Positives = 261/512 (50%), Gaps = 12/512 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G  Y  +  D LARF RL+G  V+F TG DEHGQKI + A+  
Sbjct: 2   PYTLTTPLYYVNDRPHLGSTYTTLACDALARFQRLNGKAVVFITGVDEHGQKIQRTAEAR 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            ++ +   D  S ++RD+     IS D F+RTT+ RH       + ++   GD+  G  +
Sbjct: 62  QLSPQQHCDAISGSYRDLWSRWGISQDRFVRTTDPRHLQLVDQFFARVKGSGDVISGRQT 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E Y +D                 P++W +EE  FFRLS YQ   +    +  +
Sbjct: 122 GWYCVGCEEYKDDSAEAVDP---SCPIHQKPLEWRDEENLFFRLSHYQS-QIEELVARDD 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TT 242
           FI P  RR EV +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT     
Sbjct: 178 FIQPANRRQEVRNFVAQGLRDFSISRVNVSWGLPVPGHEGHTFYVWFDALLGYLTALLDD 237

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           G     +  +   WPA +HVIGKDILRFHA++WPA L+SA LPLPK VF HGF+  +G K
Sbjct: 238 GGPVALERLEQCGWPASVHVIGKDILRFHAVFWPAMLMSAGLPLPKTVFGHGFLTREGLK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++E  G DA+R++L+R+I  G DG + +      VN DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPERLLERCGSDAVRWYLLRDIQFGDDGDFQQQRFVDLVNNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +   +P           +    +  +  +  +M +     A   V+ L  
Sbjct: 358 NRTSSMARKWFADAVPPHTDAVGPHHPLAVAANTAVTTVLTSMPSLGFKPAAEAVLQLAI 417

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
             + + +   PW   K           LY  +E  R + +LL   +P+L+ +I + L   
Sbjct: 418 AANGHLNDTAPWSRMKQPGKEAEVGDDLYAVLEATRIVGLLLSPLLPELSTRILEQLGTS 477

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +    +     L  G  L K   P+  R 
Sbjct: 478 INPDGWTEKLSWGGLVSGASLPKP-SPVMQRL 508


>gi|257454862|ref|ZP_05620113.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447795|gb|EEV22787.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 703

 Score =  332 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 128/549 (23%), Positives = 227/549 (41%), Gaps = 54/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  R  +  G  V +    D HG  I   A+ 
Sbjct: 2   RKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKSLGHQVTYVCADDAHGTAIMLKAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +  +     +         + +D++  T    +    ++++ ++ + G I     
Sbjct: 62  NGVTPEQQIADVKASHEKDFAGFLVDFDNYYSTHSPENEHYSQLIYNRLYENGHISHKAV 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE---------- 163
              Y      +  D  V             G + +     +N  +               
Sbjct: 122 EQLYDPEKGLFLADRFVKGECPKCGAKDQYGDNCEVCGTTYNATELKNPYSTLSGATPVL 181

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF L  + + L +   +  E  L     N++  +  +GL +  +SR    +G K
Sbjct: 182 KSSIHYFFNLPNFNEFLQN--WTRKEGRLQTSIANKLQEWFDAGLANWDISRDAPYFGFK 239

Query: 220 IPDD----PQYIMYVWIDALTNYLTTTGYLDNPDG-----SKAKFWPAD-------LHVI 263
           IP+     P    YVW+DA   Y+ +   L +  G     +  ++W  +        H I
Sbjct: 240 IPNTPASEPDKYFYVWLDAPVGYMASFKNLCDQQGAQLGLNFDEYWSKENHNNTEVYHFI 299

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FHA++WPA L  A    P  + +HGF+   GEK+SKS G  I     ++ +  +
Sbjct: 300 GKDIVYFHALFWPAMLEGAGFRTPTAINAHGFLTVNGEKMSKSRGTFIKADTYLQNLDPE 359

Query: 324 ALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+   +  A  +D   D +   ++VN+DL   + N+ SR    I K++   +    A
Sbjct: 360 YLRYYFASKLSASVEDINLDLEDFMQKVNSDLVGKVVNIASRCAGFIHKNHGSKL----A 415

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            T S+ ++L       ++I    + +   +A+  +++   + + Y D +KPW L K    
Sbjct: 416 LTISEPALLQQIIDAGEDIAAAYEAREFSKAMRLIMACADKANEYIDDKKPWALNKVEGQ 475

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           +A    V  V + + RQL + L   +P +  K    L V  ++  F S    L  G  ++
Sbjct: 476 QAEVQAVCTVALNIFRQLVVYLAPVLPLMCEKARIFLNV--DSLDFDS-RHALLVGHTIN 532

Query: 501 KTFDPIFPR 509
             F P+  R
Sbjct: 533 A-FTPLMQR 540


>gi|134094215|ref|YP_001099290.1| methionyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|187647726|sp|A4G3S6|SYM_HERAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|133738118|emb|CAL61163.1| methionine tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Herminiimonas arsenicoxydans]
          Length = 710

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 148/547 (27%), Positives = 245/547 (44%), Gaps = 54/547 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   HIGH  E I AD+  RF R+ G  V F    D HG  I  AA+ 
Sbjct: 7   RKLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNQVDFVGADDAHGAPIMIAAEK 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + FV   +   +   D   I++D++  T    +H   + ++  +   G I     
Sbjct: 67  AGLTPQQFVSNIAAGRKQYLDGFHIAFDNWSSTDSPENHQLAQQIYLDLKKAGLIASKTV 126

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +   A ++P   +             
Sbjct: 127 EQFFDPEKNMFLPDRYIKGECPKCHTKDQYGDNCEVCAAVYSPTDLINPYSALTGATPVL 186

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISFV----------KSGL 204
              E +FF LS      + ++ +S  ++  +  L  E  N+V  +             GL
Sbjct: 187 KHSEHFFFTLSDPRCVAFLEEWVSGLDTDGKTHLQAEVANKVKEWFSARTNPDGTISEGL 246

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----- 259
            D  +SR    +GI+IPD P    YVW+DA   YL +   L +  G     + A+     
Sbjct: 247 NDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRGENFDAYMAEPALEQ 306

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE 318
           +H IGKDI+ FH ++WPA L  +    P KVF HGF+  + GEK+SKS G  +DP++ + 
Sbjct: 307 IHFIGKDIVNFHTLFWPAMLKFSGRKTPNKVFVHGFLTVNNGEKMSKSRGTGLDPLKYLS 366

Query: 319 -EVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
             +  + LRY+L  +++   +D  ++ +    RVN+DL     N+ SR+   I K +DG 
Sbjct: 367 LGMNPEWLRYYLANKLSARNEDIDFNPEDFIARVNSDLIGKYVNIASRAAGFIAKKFDGR 426

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + +  A   +D+  +S    V  EI+     +   +AL  ++     ++ Y DA KPWEL
Sbjct: 427 VVSDWAT--ADDVFISKLRNVASEIQALYDQREYGKALRTIMEQADAINAYVDANKPWEL 484

Query: 437 KK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            K   N      V    +E  R L I L+  +P+LA ++  +L +A     +  +   L 
Sbjct: 485 AKKPENSAALQEVCSRLLEAFRILTIYLKPVLPELAKQVEALLNIAP--LQWSDVGTPLP 542

Query: 495 PGFMLHK 501
               ++ 
Sbjct: 543 HNHQVNP 549


>gi|255318346|ref|ZP_05359581.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379088|ref|ZP_06072244.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304658|gb|EET83840.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298545|gb|EEY86458.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 686

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 130/541 (24%), Positives = 228/541 (42%), Gaps = 46/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RNILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +    +      +   + +D +  T    +    + ++ K  + G+I     
Sbjct: 62  NGITPEEQIANVQKEHIRDFNGFGVHFDHYDSTNSDTNKARSQEIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE---------- 163
           +  +      + +D            E   G   +     +N  + +  +          
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKTEDQYGDSCEACGTTYNATELINPKSTLSGATPVE 181

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+L  + + L +   +     LP+   N++  +  +GL D  +SR    +G +
Sbjct: 182 KSSDHYFFKLPNFSEYLQT--WTRDSGRLPVSIANKLDEWFDAGLSDWDISRDAPYFGFE 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ FH
Sbjct: 240 IPDAPDKYFYVWVDAPIGYMSSFENYIQTKRPDLNFDDFWKKDSENEVYHFIGKDIVYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  AN   P  +F +GF+   G+K+SKS G  I     +E +  + LRY+   
Sbjct: 300 ALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYYFAS 359

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D   + D   ++VN+DL   + N+ SR    I   +D  +    A  E    +
Sbjct: 360 KLSDKVEDSDLNLDDFIQKVNSDLVGKVVNIASRCAKFINTKFDHKLSAECAEPE----L 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
           +         I +  + +    A+ ++++L    ++Y D +KPW L K   +      V 
Sbjct: 416 VQSFIEAGDSIAKAYEAREFSTAIREIMALADRANQYIDEKKPWALAKIEGEELQVHNVC 475

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V + + RQLAI L   +P LA ++ D L +  ++  F+S  Q L       + F P+  
Sbjct: 476 SVGINLFRQLAIYLAPVLPVLAQQVQDFLKL--DSFNFESRKQILV--NHEIELFQPLMQ 531

Query: 509 R 509
           R
Sbjct: 532 R 532


>gi|320325637|gb|EFW81699.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327080|gb|EFW83094.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330876900|gb|EGH11049.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 682

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 220/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPTFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++     L  G      F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWEDHKTLL--GNHQLNPFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|300312383|ref|YP_003776475.1| methionyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075168|gb|ADJ64567.1| methionyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 690

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 151/534 (28%), Positives = 238/534 (44%), Gaps = 41/534 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L+++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  AA+ 
Sbjct: 7   RQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEK 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS---------- 114
           AG+T + FV   +   +   D   I++D++  T    +H+  + +++ +           
Sbjct: 67  AGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKT 126

Query: 115 --DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE---------- 162
                D  K  +     ++ E      +   G   +  +A ++P                
Sbjct: 127 IDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPV 186

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF--VKSGLKDLSLSRKTFDW 216
               E +FF+LS  +        +     L  E  N+   +   + GL D  +SR    +
Sbjct: 187 MKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRDAPYF 246

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           GI+IPD P    YVW+DA   YL +        G     + AD      H IGKDI  FH
Sbjct: 247 GIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGRDFDAFMADDKTEQYHFIGKDITYFH 306

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYFLV 330
            ++WPA L  A    P  VF+HGFI   GEK+SKS G  I P+  +   +  + LRY++ 
Sbjct: 307 TLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIA 366

Query: 331 RE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +  A  +D  ++ D    RVNADL     N+ SR+   I K ++G + T  A   +D++
Sbjct: 367 AKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWAT--ADDA 424

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TV 447
            L+    V  EIR   + +   +AL  V+     ++ Y DA KPWEL K +   A    V
Sbjct: 425 FLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDAQLHEV 484

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               +E  R L + L+  +P+LA ++   L V  +   +  +   L  G ++H 
Sbjct: 485 CSRLLEAFRILTVYLKPVLPQLAAQVEAFLQV--QPFQWGDVAMPLADGHVIHA 536


>gi|298488744|ref|ZP_07006773.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156817|gb|EFH97908.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 682

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 221/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     +  +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLHHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKTLLANHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|257486635|ref|ZP_05640676.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|330984847|gb|EGH82950.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331010115|gb|EGH90171.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 682

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 220/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++     L  G      F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWEDHKTLL--GNHQLNPFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|292492766|ref|YP_003528205.1| methionyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581361|gb|ADE15818.1| methionyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 674

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 133/539 (24%), Positives = 229/539 (42%), Gaps = 45/539 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF R+   +  +    D HG  I   AQ 
Sbjct: 3   RRILVTSALPYANGPLHLGHLVEYIQTDIWVRFQRIRSHECYYVCADDAHGTPIMLRAQQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  ++Q  R  R       +S+D++  T    +      ++ +  DKG I     
Sbjct: 63  EGITPEALIEQCGREHRADFADFAVSFDNYYSTHSPENRALSETIYLRNRDKGHITTRTV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
              Y      +  D  +             G   +   A + P +               
Sbjct: 123 RQAYDPIKGMFLPDRFIRGTCPRCGAPDQYGDSCEACGATYTPTELKDAISVLSGTPPVE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L  ++  L ++ +      L  E  N++  + ++GL+D  +SR    +G  
Sbjct: 183 RESEHYFFKLKDFEPLLKAWTQGG---HLQHEMANKLNEWFEAGLQDWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IPD      YVW+DA   YL +  YL + +G     + A        H IGKDIL FHA+
Sbjct: 240 IPDATDKYFYVWLDAPIGYLASFKYLCDRNGLDFDAFMAPDSTTELYHFIGKDILYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A+  LP  +F+HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 300 FWPAMLHGADFRLPTAIFAHGFLTVNGQKMSKSRGTFIKAHTYLNHLNPEYLRYYFAAKL 359

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D   + +    RVNADL   + N+ SR    I K +     +  A   + E++  
Sbjct: 360 GSGIEDLDLNFEDFTARVNADLVGKVVNIASRCAGFINKHF----HSRLANHLTKEALFQ 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYV 450
             +     + +  +N+    A+ ++++L  + +RY D ++PW   K          V  +
Sbjct: 416 EFAAAADRLAQYYENREFGHAMREIMALADQANRYIDDRQPWVAIKEPGREQEVQEVCTL 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + + RQL + L+  +P +A K  + L        +      L     L+  F P+  R
Sbjct: 476 GLNLFRQLMVYLKPVLPMMAEKAEEFLNCRP--LVWSDAGTPLL-NHTLN-RFQPLMTR 530


>gi|229588700|ref|YP_002870819.1| methionyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511561|sp|C3KBZ7|SYM_PSEFS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229360566|emb|CAY47423.1| methionyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 683

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/545 (22%), Positives = 223/545 (40%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +    ++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFLVDFDNFHSTHSDENRELSSQIYLRLKEAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSITQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L ++  S     L     N++  ++ +GL+   +SR    
Sbjct: 181 TPVLKDSQHFFFKLPDFQQMLQTWTRSGT---LQDAVANKIAEWLDAGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCDRTPELDFDAFWAKDSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  +    P  +  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGSGYRKPTGIAVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  
Sbjct: 358 YASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAENAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
           ++ L+        I +  + +   RA+ +++ L    + +   + PW L K    +A   
Sbjct: 418 DAFLA----AAPSIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQAEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    V + RQL I L+  +P LA      L VA       +    L     L++ F P
Sbjct: 474 AICATGVNLFRQLVIFLKPVLPLLAADAEAFLNVAPLTWNDHA---TLLSNHQLNE-FKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|124266353|ref|YP_001020357.1| methionyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|187647749|sp|A2SEY3|SYM_METPP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|124259128|gb|ABM94122.1| methionyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 697

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 152/562 (27%), Positives = 238/562 (42%), Gaps = 66/562 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L+++TA+ Y N   HIGH  E I AD+  RF R+ G  V F    D HG  I  AA+ 
Sbjct: 3   RQLFVTTALPYANGHFHIGHIMEYIQADIWVRFQRMQGHAVHFVGADDAHGAPIMIAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H   +  ++ +   G I+    
Sbjct: 63  AGKTPQQFVADIAAGRKPYLDGFHIAFDNWHSTDGPENHQLAQDTYRALRRNGLIFTREI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G   +   A + P +               
Sbjct: 123 EQFFDPVKAMFLPDRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSTLTGATPVM 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESH------PEFILPIERRNEVISFV------KSGLKDL 207
              E +FF+LS+ +        +H       +  L  E  N++  +         GL D 
Sbjct: 183 KTSEHHFFQLSSPRCLDFLKDWTHGSAPISGQPRLQAEVLNKIKEWFATDEQGHGGLADW 242

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHV 262
            +SR    +GI+IPD P    YVW+DA   YL +     +  G   + + AD     +H 
Sbjct: 243 DISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDKQGLDFEAFMADPKTEQVHF 302

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVG 321
           IGKDI  FH ++WPA L  +    P  VF HGFI   GEK+SKS G  I P+  +   + 
Sbjct: 303 IGKDITYFHTLFWPAMLHFSGRRTPDHVFVHGFITVSGEKMSKSRGTGISPLRYLEIGMN 362

Query: 322 VDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + LRY++  +     +D  ++ D    RVN+DL     N+ SR+   + K +DG +   
Sbjct: 363 AEWLRYYIAAKLNGRVEDVDFNPDDFVARVNSDLVGKYINIASRAAGFLSKRFDGRLT-- 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
                   ++L        +I    +++   +AL + ++L   V+ Y DA KPWEL K  
Sbjct: 421 AELPAESRTLLEGLQAARDDIARLYEDREYAKALREAMALADRVNEYVDANKPWELAKQA 480

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRC-------- 485
               R   V    +E  R L I L+  +P LA ++   L V     AD  R         
Sbjct: 481 GQDARLQQVCSTCIEAFRLLTIYLKPVLPALAAQVEGFLKVEPMRFADAGRLLGAHAISE 540

Query: 486 FQSLDQRLKPGFMLHKTFDPIF 507
           ++ L QR+ P     K  D +F
Sbjct: 541 YKHLMQRVDP-----KLLDALF 557


>gi|221199339|ref|ZP_03572383.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205759|ref|ZP_03578774.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174597|gb|EEE07029.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180624|gb|EEE13027.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 719

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 131/547 (23%), Positives = 230/547 (42%), Gaps = 48/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +++     +   D   +S+D+F  T  + +      ++  + D G I +
Sbjct: 67  AEKEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 127 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSKHYFFRLSD--PRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGIDFDAWIRAGSSAEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 421 AMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                  V++E  R L++ L+  +P++A  +     +A     +    + L     + K 
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAP--LAWADAAKPLSSAQPI-KA 537

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 538 YQHLMTR 544


>gi|195064774|ref|XP_001996635.1| GH19679 [Drosophila grimshawi]
 gi|193892767|gb|EDV91633.1| GH19679 [Drosophila grimshawi]
          Length = 578

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 171/526 (32%), Positives = 271/526 (51%), Gaps = 26/526 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL      V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPTTTVRLCTGTDEHGTKIQQAAAGH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + D+ S  +RD+     I++DDFIRTTE+RH       W ++  +G IY   YS
Sbjct: 81  KVPVDQYCDEISARYRDVFKAASIAHDDFIRTTEQRHKQAVAHFWHRLKSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 141 GWYCVSDETFLTDSQLRLDESSGTRYSLESGHPVEWTEETNYMFRLSNFQD-DVRHWVKQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              + P +    ++  +   L D+S+SR      W I +P+D    +YVW+DAL NYL++
Sbjct: 200 EARVRPAKFEKILLDTLSEPLPDVSVSRPANRVHWAIPVPNDDSQTVYVWLDALINYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +        +WP    +IGKDIL+FH IYWPAFLL+A L  P++++ H      G+
Sbjct: 260 LGYPNE---EYLAYWPPAQQIIGKDILKFHGIYWPAFLLAAGLSPPQQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+   ++  ++ LRYFL+RE     DG +      + +N++LA+ +GNL
Sbjct: 317 KMSKSKHNVVDPVLAAKQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYD-----GMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRAL 414
           +SR+ +  L  +       +   P    + D  + +     ++     ++ +    H   
Sbjct: 377 LSRACAKTLNPHQVYPASHVEHLPQLLQDLDAAKRLQEALLQLAGRCEQHYECNHFHLVA 436

Query: 415 AQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             VI+ +   + +F+  KPWELK      +  R  T++ +T++ +R   I+LQ  +P+L 
Sbjct: 437 DTVIATLHAANNFFECAKPWELKANGKTPDAQRLQTIIAMTMDALRLCGIVLQPMMPQLT 496

Query: 471 NKIFDILFVADENRCFQSLDQRLKPG----FMLHKTFDP-IFPRFL 511
           +++ D L V    R +  L+     G      L   +   +F R +
Sbjct: 497 SRLLDKLNVPSSERSWHHLNASFATGKQHNHQLDNQWSALLFQRIV 542


>gi|312131388|ref|YP_003998728.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907934|gb|ADQ18375.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 681

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 138/548 (25%), Positives = 252/548 (45%), Gaps = 49/548 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  ++ A+ Y N   HIGH A   I ADV  R+ R  G DV F +GTDEHG  I   A+ 
Sbjct: 2   RYTVTAALIYANGPIHIGHLAGCYIPADVFVRYLRSKGEDVAFISGTDEHGVPITIKAKK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +  VD+  +  +D  +   IS+D + RTT   HH T +  ++K+ DKG   +   
Sbjct: 62  EGVSPQEVVDKYYKIIKDSFEDFGISFDIYSRTTSPVHHQTSQEFFRKMYDKGFFDEIET 121

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
             ++    + +  D  +             G   +   +  +P   ++            
Sbjct: 122 EQYFDETAQQFLADRYIVGECPVCHSPGAYGDQCEKCGSSLSPTDLIQPKSTISGSAPVM 181

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + ++  L   Q ++  Y  SH E+        +  S++K GL+  +++R   DWG+K
Sbjct: 182 KATKNWYLPLDKMQPEIEKYVNSHTEWK--TNVFGQCQSWLKQGLQPRAMTRD-LDWGVK 238

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +P +     ++YVW DA   Y++ T       G   + +  D     ++ IGKD + FH 
Sbjct: 239 VPVEGADGKVLYVWFDAPIGYISMTKEWAEKTGKNWEDYWRDKDTKLINFIGKDNIVFHC 298

Query: 273 IYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFL 329
           I +PA  +   +  L   V ++ F+  + +KIS S    +   E ++E     D LRY L
Sbjct: 299 IIFPAMCMAEGSYILADNVPANEFMNLENDKISTSRNWAVWLHEYLQEFPGKQDVLRYVL 358

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  KD  +     + + N++L    GN V+R++ +  K ++G +PTPG F E D  
Sbjct: 359 TANAPETKDNDFTWKDFQTKNNSELVGIYGNFVNRTIVLTKKYFEGKVPTPGTFEEIDTQ 418

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            L    ++ ++I +++Q+     ALA ++ +    ++Y    +PW++K  +P+R  T+L+
Sbjct: 419 TLEALKKLPEQIGDSVQHYRFREALAGMMEVARLGNKYLADTEPWKVK--DPERVKTILF 476

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-----CFQSLDQ--RLKPGFMLHKT 502
           V  ++   LAI+ + F+P  + KI D +   + N       +    +   +  G  +++ 
Sbjct: 477 VAHQITGTLAIVSEPFLPFTSRKIMDQMSAKEWNTTGAIPTWSDAGKTDLVPAGTTINEG 536

Query: 503 FDPIFPRF 510
              +F + 
Sbjct: 537 GL-LFEKI 543


>gi|289626587|ref|ZP_06459541.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867252|gb|EGH01961.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 682

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 220/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWTLAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++     L  G      F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWEDHKTLL--GNHQLNPFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|195145300|ref|XP_002013634.1| GL23293 [Drosophila persimilis]
 gi|194102577|gb|EDW24620.1| GL23293 [Drosophila persimilis]
          Length = 592

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 169/502 (33%), Positives = 265/502 (52%), Gaps = 23/502 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL--DVLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL     DV   TGTDEHG KI +AA N 
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPTADVRLCTGTDEHGTKIQQAAANH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    +  + S  +R++     I  DDFIRTTE+RH       W+ +  +G IY   YS
Sbjct: 81  KVPVDQYCQEISSRYREVFQAAHIHNDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQD-DVRHWVKQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +P D    +YVW+DAL NYL++
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPGDASQTVYVWLDALVNYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +         WP    VIGKDIL+FH IYWPAFLL+A L  P++++ H      G+
Sbjct: 260 LGYPNE---EFLDHWPPAQQVIGKDILKFHGIYWPAFLLAAGLQPPQQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG Y      + +N+++A+ +GNL
Sbjct: 317 KMSKSKHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSEMADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD--------ESILSVCSRVLQEIRENMQNQLIHRA 413
           +SR+ +  L +   + P P     +D        + +     ++ +    + +    H  
Sbjct: 377 LSRACAKSL-NPRQVYPQPHVEHLADLLRSVDAAKRLRDSLLQLSERCEAHYECNHFHLV 435

Query: 414 LAQVISLVSEVDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
               ++ +   + +F++ +PWELK      N  R +T++ +T++ +R   I+LQ  +P+L
Sbjct: 436 ADTTMAALHAANNFFESARPWELKTGNEGANEPRLATIIAMTMDALRLCGIVLQPIIPQL 495

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
           A ++ D L V    R +  L++
Sbjct: 496 ATRLLDKLSVPASQRGWDCLNE 517


>gi|294155450|ref|YP_003559834.1| methionine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600499|gb|ADE19995.1| methionine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 517

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 164/516 (31%), Positives = 273/516 (52%), Gaps = 10/516 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++  YI+T I Y +   HIGH Y   +A  +A + +L+G DV F TG+DEHGQKI  
Sbjct: 5   MNKKKTFYITTPIYYASGNLHIGHLYTTTLAWSIANYKKLNGYDVKFLTGSDEHGQKIFL 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A V  + +VD+    ++ M     I YD F RTT K H  T + ++    ++G IY
Sbjct: 65  KANEANVKPQKYVDELVETYKKMWTDFGIDYDFFSRTTNKNHVKTIQEIFDFFLNEGIIY 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSY 179
           KG Y G YS+ DE +    +      G Y++   N  ++ ++EE YFF++S + + L+  
Sbjct: 125 KGNYEGLYSISDEEFLTKSQAICDESGNYFHPTSNHKLELVKEESYFFKMSKFSEWLIEQ 184

Query: 180 YESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            +++P ++ P +  NE+++     GL+DLS++R   +WGIK  +D ++ +YVW+DAL NY
Sbjct: 185 IKNNPTWLNPQKTVNEIMNNFLLKGLEDLSVTRTNVEWGIKTLNDDKHTIYVWLDALCNY 244

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           ++  G+      +    +  +    +H++GK+I RFH IYWP FL + N+  P K+ SHG
Sbjct: 245 ISALGFDIKESSTDFVKYWQNGDEIVHLLGKEIARFHFIYWPIFLKALNIKQPTKLISHG 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +I+    K+SKS  NVIDP +++++   + ++YF V +I  G DG +D +  +  +N++L
Sbjct: 305 WIITPTGKMSKSKNNVIDPYDLLKKYHPEMIKYFFVSKINIGDDGVFDIENFENIINSEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +   I    +     ++I        +E    M N  +   L
Sbjct: 365 INNYGNLVSRTLKMISNSFSNGINFHKSIKTIHKNIEQEIINSKEEFINKMDNYELSEGL 424

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              I+L S +++Y D   PW+L   N +    VL   +  I  ++  L   +P    KI 
Sbjct: 425 KIAINLSSNLNKYIDETTPWKLT-ENKEELELVLSRLLNGIYAVSSYLSIVMP---QKIL 480

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           D+    + N  F  ++   K   ++      +F R 
Sbjct: 481 DVSKALNINLSFDKIENFNKFDGVISAPKFMLFERI 516


>gi|254525465|ref|ZP_05137517.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221536889|gb|EEE39342.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 514

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 184/509 (36%), Positives = 271/509 (53%), Gaps = 13/509 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   
Sbjct: 2   TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   D  S+ F +     +IS+D FIRT+ K H       +K++    DIY G   
Sbjct: 62  GIEPKSHCDAISKVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYKRVKASDDIYMGVQK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E    +           ++W  EE  FFRLS YQ   +    + P 
Sbjct: 122 GWYCVGCEEFKDNPE---NSSTYKCPIHQKNLEWKNEENLFFRLSKYQK-EIEKIINEPS 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     
Sbjct: 178 FIEPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSD 237

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                 K    K WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+K
Sbjct: 238 ATEHLLKNSINKGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +D  +P        ++ + +     ++    N  N  +  A  +V+SL  
Sbjct: 358 NRTSSMSRKWFDNKVPNNEKILSENK-LENFAQIAVKNYIYNFDNYKLDLAANEVLSLAI 416

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-V 479
             + Y +  +PW L K   +      ++Y  +E  R + +LL   +P+L+ KI + L  +
Sbjct: 417 NTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSTKINEQLGSI 476

Query: 480 ADENRCF--QSLDQRLKPGFMLHKTFDPI 506
             E   +  Q +   L     L K    I
Sbjct: 477 YKEEIPWKKQLIWGLLVSNTSLPKPTPII 505


>gi|289647567|ref|ZP_06478910.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 682

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 220/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWTLAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++     L  G      F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWEDHKTLL--GNHQLNPFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|240047446|ref|YP_002960834.1| methionyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985018|emb|CAT05011.1| Methionyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 512

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 170/513 (33%), Positives = 283/513 (55%), Gaps = 10/513 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +++ Y++T I Y +   HIGH Y   IA V+  + +L G D    TG+DEHGQKI + A
Sbjct: 2   SKKRFYVTTPIYYASGNLHIGHLYTTTIAWVIKNYKKLQGYDARLLTGSDEHGQKIFQKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q   +  + FVDQ +  F+++ ++ +I YD F RTT   H +    ++ ++  KG I+K 
Sbjct: 62  QENQLEPQFFVDQVANKFKNLWEIFEIDYDYFSRTTSDFHKEYVSKIFDEMLAKGFIFKD 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G YS+ DE +    +  K  DG Y+    + ++++EEE +FF +   Q  LL ++++
Sbjct: 122 FYKGLYSVSDEEFLTPKQAIKKDDGYYHPVSGSKMEYIEEESFFFDMKKMQSWLLDFWKN 181

Query: 183 HPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           HP+FI   +  NE+I    + G+++LS++R + +WGI +   P +++YVW+DAL NY++ 
Sbjct: 182 HPQFISEKKIENELIKNFLEKGIENLSVTRTSLEWGIPVKSQPGHVIYVWLDALFNYISA 241

Query: 242 TGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
                + +     FW      +HV+GK+I RFH IYWP FL S NL LP  + +HG+++ 
Sbjct: 242 LK-PLDKNSDFDTFWNQSEQIVHVVGKEITRFHCIYWPIFLQSLNLRLPSNIITHGWLIT 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNV+DP+E+I++  V+ ++ F   +I  G+DG +D+  L    N+ LAN  
Sbjct: 301 PEGKMSKSKGNVVDPLELIKKHDVETIKLFFASQIILGQDGIFDEHNLNLFYNSTLANNF 360

Query: 359 GNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL+SR+++MI K++D  +I       E+D  I     +   +  +   N  + +AL   
Sbjct: 361 GNLISRTIAMINKNFDTPLIYNKELLDENDVYIYKQIEQTHYQFIDLFDNLEVDKALKLA 420

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ISL   ++ Y D QKPW +  +  ++ S VL   +  I  +  +    +PK + KI  IL
Sbjct: 421 ISLSKNLNSYIDIQKPWLI--SQKEKLSVVLLALLNGIYAVNTMFSVVMPKNSKKILAIL 478

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++   Q      K    + +  + I+PR 
Sbjct: 479 --KQKSISLQQNLNFSKFDKTIFEKAEIIYPRL 509


>gi|169634155|ref|YP_001707891.1| methionyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169152947|emb|CAP01992.1| methionyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 687

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 130/542 (23%), Positives = 230/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDVNKARSTDIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFAEYLQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  + +  A ++    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESD---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I    + +    A+ ++++L    ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +  LA ++ D L +  E+  F+S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLSTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|288801014|ref|ZP_06406470.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331948|gb|EFC70430.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 681

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 134/545 (24%), Positives = 241/545 (44%), Gaps = 38/545 (6%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M E+  ++  ++ A+ Y N   HIGH A   I AD+  R+ RL G +V F  G+DEHG  
Sbjct: 1   MAEKNYKRTTVTAALPYANGGVHIGHLAGVYIPADIYVRYLRLKGEEVAFICGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +  VD+  +  +D      IS+D + RTT K H  T    +K + D  
Sbjct: 61  ITIRAKKEGITPQDVVDRYHQLIKDSFSDFGISFDIYSRTTSKIHQQTASDFFKHLLDNN 120

Query: 118 DIYKGCYSGWY-----------SLRDEAYYNDDEVYKGADGQYYNAQHNPVQW------- 159
            + +G     Y            +  E  +  +E   G   +      +P +        
Sbjct: 121 KLQEGETEQLYDEEVHQFLADRYITGECPHCHNEGAYGDQCESCGRDLSPTELINPKSTI 180

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ  L  +     +         +  S++   L+  +++R 
Sbjct: 181 SGSTPVLRKTKNWYLPLNDYQTWLKEWILEGHKEWR-ANVYGQCKSWLDLDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDIL 268
             +WGI +P +     ++YVW DA   Y++ T  L   D  K         +H IGKD +
Sbjct: 240 -LNWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELYPNDWKKWWQDSETRLVHFIGKDNI 298

Query: 269 RFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P+      +  LP+ V ++ F+  +  KIS S    I   E ++E+    D L
Sbjct: 299 VFHCIIFPSMLKAHGDYILPENVPANEFLNLEDNKISTSRNWAIWLHEYLQELPNKQDVL 358

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     ++R N +L    GN V+R++ +  K ++G++P  G   +
Sbjct: 359 RYVLTANAPETKDNNFTWKDYQERNNNELVAVYGNFVNRALQLTKKYFNGVVPACGELLD 418

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D+ + +    V +++   + N     A  +V+++    ++Y    +PW+L KT P R  
Sbjct: 419 IDKEVFNELKGVKEKVETLLNNYKFRDAQREVMNIARIGNKYMTDCEPWKLWKTEPQRVE 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           T+LYV ++++  LAI  + F+P  + K+  ++ +   +         L  G  L +  + 
Sbjct: 479 TILYVCLQLVANLAIAFEPFLPFSSKKLRQLIHIESADWSKLGATDLLTQGHQLAEP-EL 537

Query: 506 IFPRF 510
           +F + 
Sbjct: 538 LFEKI 542


>gi|120553871|ref|YP_958222.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|187647734|sp|A1TZ66|SYM_MARAV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120323720|gb|ABM18035.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 678

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 235/542 (43%), Gaps = 47/542 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+  RF  + G +  +    D HG  I   
Sbjct: 6   KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRFQNMRGHNCYYVCADDAHGTAIMLR 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  +D+  +  ++      I +D++  T  + +      +++++ D   I  
Sbjct: 66  AEREGITPEQLIDRIRQEHQEDFAGFHIRFDNYYSTHSEENQYFSEYIYRQLKDNDHIAT 125

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
              + ++    E +  D            E   G + +   A + P + +          
Sbjct: 126 RKITQFFDPEKEMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 185

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFF+L  + D L  +  S     L  +  N++  ++ +GL++  +SR    +
Sbjct: 186 PVEKESEHYFFKLPEFHDFLSKWTRSGA---LQPQVANKLAEWLDAGLQEWDISRDAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   YL +     +        FW  D      H IGKDI+ F
Sbjct: 243 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKKDSSAEVYHFIGKDIINF 302

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L  A    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 303 HALFWPSMLHDAGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLDPEYLRYYFA 362

Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + D    RVN+DL   + N+ SRS   I K +DG     G  TE D+ 
Sbjct: 363 AKLTGGVDDMDLNLDDFAARVNSDLVGKVVNIASRSAGFITKRFDG---KLGKVTEQDK- 418

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            L       ++I E  + +   RA+ +++ L    ++Y + ++PW + K     D+   +
Sbjct: 419 -LKEFIDAGEQIAEFYEAREFGRAMRRIMELADIANQYVNDEQPWVIAKQEGQDDKLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L   +PK A+     L     +R   +    L     + K F P+ 
Sbjct: 478 CTNALNMFRLLMTYLAPVLPKTADAAQSFLN----SRLDWNNRAALLENHGIDK-FKPLM 532

Query: 508 PR 509
            R
Sbjct: 533 NR 534


>gi|113969995|ref|YP_733788.1| methionyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130483|sp|Q0HJN6|SYM_SHESM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113884679|gb|ABI38731.1| methionyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 676

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 125/543 (23%), Positives = 233/543 (42%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      +I++D++  T  + +      ++ K+   G I  
Sbjct: 63  AQQLGMAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSGA---LQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T +D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDA 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--AST 446
            +        ++I E  + +   +A+ ++++L    + +     PW+L K +  +  A  
Sbjct: 420 FLAKQ-----EQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEVAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +        +   +  L Q +  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQ---QTLTWDGLGQDM-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|330981556|gb|EGH79659.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 682

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 223/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  ++   +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDVMLKRWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKILLTNHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|330937550|gb|EGH41491.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 682

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 224/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKRWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKILLTNHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|325275202|ref|ZP_08141169.1| methionyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324099689|gb|EGB97568.1| methionyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 679

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 224/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSSLIYTRLREAGHIT 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWREGSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++ +  A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNQGVMVSGDAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPSIAEAYEGRDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 474 AICAQGINLFRQLVIFLKPVLPLLAADAEAFLNVAP--LTWNDHLSRLE-NHTLN-PFKA 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|91086451|ref|XP_969201.1| PREDICTED: similar to AAEL014709-PA [Tribolium castaneum]
 gi|270010323|gb|EFA06771.1| hypothetical protein TcasGA2_TC009707 [Tribolium castaneum]
          Length = 926

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/550 (21%), Positives = 233/550 (42%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIA-DVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
                + I++A+ Y N  PH+G+    +++ DV ARF R+   + LF  GTDE+G     
Sbjct: 253 STERNILITSALPYVNNVPHLGNIIGCVLSSDVFARFCRICNYNTLFIGGTDEYGTATET 312

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++ +   D+     +D+ +  +IS+D F R++  +  + C+ ++ ++++ G ++
Sbjct: 313 KALEEGLSCQAICDKYYAIHKDIYNWFNISFDYFGRSSSPQQTELCQDMFLQLNNNGFMF 372

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-------------NPVQWMEEEGYFF 167
                  +  + + Y  D  V  G      N +              N V+         
Sbjct: 373 TEAVEQLHCEKCDRYLADRFVEGGCPHPGCNYEDARGDQCDGCGKLVNAVELKNPRCKIC 432

Query: 168 RLSAYQDKLLSY----------YESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTF 214
           R +        +               +   P    N  +   ++++ GLK   ++R   
Sbjct: 433 RSTPKLKTSNQFFIDLPKLEPLLLHWMKQSAPGWSSNAQVIGKAWIREGLKPRCITRD-L 491

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDIL 268
            WG+ +P       + YVW DA   Y++             +  P         + KD +
Sbjct: 492 KWGVPVPLKDFKDKVFYVWFDAPIGYMSINKAYTEKWEEWWRPKPEHKITLYQFMAKDNV 551

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FHA+ +PA LL AN        + +  ++ ++  K SKS G  +   +  +  +  D  
Sbjct: 552 PFHAVMFPACLLGANRGYITVSHIMATEYLNYEDGKFSKSRGVGVFGNDARDTGIPSDVW 611

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +    L  + N++L N +GN ++R++     +++  +P     T+
Sbjct: 612 RFYLLYVRPESQDSSFSWSDLATKNNSELLNNLGNFINRALVFAKNNFNCTVP-EMQLTK 670

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            D ++L +C+R L+     ++   +   +  ++S+    ++Y    +PW L K  P+   
Sbjct: 671 DDFTLLVLCTRELKGYVNCLEKCKLRDGIRHILSISRLGNQYMQFNQPWVLLKGTPEEKV 730

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLH 500
           RA+TV+ +   +   LA LL  ++P  +N +   L  A+     +S++  Q L PG  L 
Sbjct: 731 RAATVVGLCCNIAALLATLLHPYMPDTSNTLKKQLNCANTALTPESIEIRQLLPPGHKLG 790

Query: 501 KTFDPIFPRF 510
               P+F + 
Sbjct: 791 NPA-PLFAKL 799


>gi|77164486|ref|YP_343011.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433423|ref|ZP_05046931.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123594665|sp|Q3JCG5|SYM_NITOC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76882800|gb|ABA57481.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089756|gb|EDZ67027.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 674

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 136/538 (25%), Positives = 236/538 (43%), Gaps = 47/538 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF R+ G +  +    D HG  I   AQ 
Sbjct: 3   RRILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRMRGHECYYVCADDAHGTPIMLRAQQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +  +DQ S+  +       IS+D +  T    +      ++ +  DKG I     
Sbjct: 63  EGVTPETLIDQCSQEHQADFADFAISFDSYHSTHSAENRTLSETIYLRNRDKGHITTRIV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
              Y      +  D  +             G + +   A ++P +               
Sbjct: 123 RQAYDPVKGMFLPDRFIRGTCPRCDALDQYGDNCEVCGATYSPTELKEAISVLSGTPPIE 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E YFF+L+ ++  L  + +      L  E  N++  + ++GL+D  +SR    +G  
Sbjct: 183 RESEHYFFKLNDFEPLLKRWTQGG---HLQPEMANKLNEWFEAGLQDWDISRDAPYFGFP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVIGKDILRFHAI 273
           IP+      YVW+DA   YL +  +L + +G     +  P       H IGKDIL FHA+
Sbjct: 240 IPESTDKYFYVWLDAPIGYLASFKHLCDREGLDFDSFMTPHSTAELYHFIGKDILYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A   LP  +F+HGF+   G+K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 300 FWPAMLHGAGFRLPTAIFAHGFLTVNGQKMSKSRGTFIKARTYLKHLNPEYLRYYFAAKL 359

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D   + D    RVNADL   + N+ SR    I K +   +    A    ++S+  
Sbjct: 360 GSGIEDLDLNFDDFMSRVNADLVGKVINIASRCAGFINKHFQNRL----ADRLVEKSLFQ 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT- 451
                 + + ++ + +    A+ ++++L  + +RY D Q+PW   K +P+R   V  V  
Sbjct: 416 KFVAASEHLAQHYEAREFGHAMREIMALADQANRYIDEQQPWVAIK-DPERKQEVQEVCT 474

Query: 452 --VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + + RQL I L+  +P    K         ++  +  +D  L     ++  F+P+ 
Sbjct: 475 LGLNLFRQLMIYLKPVLPMTTEKAEAFFN--SQSLTWSDVDTPLL-NHTIN-RFEPLM 528


>gi|170703076|ref|ZP_02893899.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170132017|gb|EDT00522.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 720

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 137/547 (25%), Positives = 229/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G + +   + + P + +          
Sbjct: 135 RAIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     +  I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLRDAIASIAAHYEAREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     VA     +     S  Q +K    
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVAPLTWADAATPLSSAQPIKAYQH 548

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 549 LMTRVDP 555


>gi|262373343|ref|ZP_06066622.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313368|gb|EEY94453.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 685

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 135/542 (24%), Positives = 232/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEAQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKAEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +        LP+   N++  + +SGL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFSEYLQKWTRDQGR--LPLSIANKLDEWFESGLSDWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++         PD S   FW  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  + +  A  E    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPE---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I +  + +    A+ ++++L  + ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAQAYEAREFSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVHDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLAI L   +P LA ++   L +  E+  F S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAIYLAPVLPTLAAQVQSFLQL--ESFDFASRQQILVA-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|325105850|ref|YP_004275504.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974698|gb|ADY53682.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 685

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 133/533 (24%), Positives = 236/533 (44%), Gaps = 39/533 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  I+ A+ Y N   HIGH A   I AD+  R+ RL   DV+F  G+DEHG  IA  A 
Sbjct: 7   KRYTITAALPYANGPKHIGHLAGAYIPADLYVRYLRLKERDVVFVCGSDEHGTAIANQAM 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  +D+      +    L IS+D + RT+E  HH+T +  ++ + +K       
Sbjct: 67  KENTTPRAIIDKYHTLIEECFSKLGISFDIYHRTSEPIHHETAQDFFRVLDNKDIFKVES 126

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---------- 162
              +Y     A+  D  +             G   +      +P + +            
Sbjct: 127 SEQYYDEEAHAFLADRYIKGTCPNCGDHNAYGDQCEKCGTSLSPDELINPISTLTGNKPV 186

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + ++  L+ Y+  L  +     +         +  S++  GL   +++R   DWGI
Sbjct: 187 KKMTKHWYLPLNEYEGFLKEWILEGHKSDWKTNVYGQCKSWIDGGLHPRAVTRD-LDWGI 245

Query: 219 KI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           K+   D    ++YVW DA   Y++ T      +    + +  D     +H IGKD + FH
Sbjct: 246 KVPAQDAEGKVLYVWFDAPIGYISATKQWAIDNNKDWEVYWKDKETKLVHFIGKDNIVFH 305

Query: 272 AIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--GVDALRYF 328
            I +P          LP  V ++ F+  +G+K+S S G  I+  E +E+    +D LRY+
Sbjct: 306 CIVFPVMLKTHGEFILPDNVPANEFMNLEGDKMSTSRGWSIEMHEYLEDFPTRIDELRYY 365

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L        D  +     + RVN +L   +GN V+R + ++ K + G I + G     D 
Sbjct: 366 LASIAPETSDSEFTWKDYQARVNNELVAILGNFVNRVMILMQKYFAGKIESDGKMELKDA 425

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +I +    +  E+ ++ +     +ALA  + +    ++Y   ++PW+  K  P+ A  VL
Sbjct: 426 AISADIKSLYSEVEQSFEAYKFRQALASAMDIARLGNKYLTEKEPWKSYKEGPEEAREVL 485

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +  + +I   AI LQ F+P  A K+F++L + DE +  + +    + G  L++
Sbjct: 486 HNCLHIIAHAAICLQPFLPNTAKKMFNMLNLKDEYKFGEEV--VFEAGHQLNQ 536


>gi|195392274|ref|XP_002054784.1| GJ22603 [Drosophila virilis]
 gi|194152870|gb|EDW68304.1| GJ22603 [Drosophila virilis]
          Length = 583

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 168/501 (33%), Positives = 264/501 (52%), Gaps = 21/501 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           Y++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  YVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRHPERRVRLCTGTDEHGTKIQQAAAAH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + D+ S  +RD+     I +DDFIRTTE+RH       W  +  +G IY   YS
Sbjct: 81  KVPVGQYCDEVSARYRDVFGAAGIEHDDFIRTTEQRHKQAVAHFWHSLQSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  + ++   A    +Y     +PV+W EE  Y FRLS +QD  + ++   
Sbjct: 141 GWYCVSDETFLTESQLRLDATSGTRYSLESGHPVEWTEETNYMFRLSQFQD-DVQHWVKQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P + +  ++  +   L D+S+SR      W I +P+D    +YVW+DAL NYL++
Sbjct: 200 KACIRPAKFQKILLDTLSEPLPDVSVSRPANRVHWAIPVPNDDTQTIYVWLDALINYLSS 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY +    +    WP    +IGKDIL+FH IYWPAFLL+A L  P+++  H      G+
Sbjct: 260 LGYPNEQYRAD---WPPAQQIIGKDILKFHGIYWPAFLLAAGLAPPQQLHVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP++  ++  ++ LRYFL+RE     DG +      + +N++LA+ +GNL
Sbjct: 317 KMSKSRHNVVDPVQAAQQYTMEGLRYFLLREGVAHSDGNFSHVKALRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYD-----GMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRAL 414
           +SR+ +  L          +   P    + D  + +     ++     ++ +    H   
Sbjct: 377 LSRACAKSLNPQQIYPEPHVEHLPHLLHDVDAAKRLQESLLQLQGRCEQHYEGNHFHLVA 436

Query: 415 AQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              I+ +   + +F+  KPWELK      N  R  T++ +T++ +R   I+LQ  +P+L 
Sbjct: 437 DTAIAALHATNNFFECAKPWELKAGGSSPNAPRLQTIIAMTMDALRLCGIVLQPMIPQLT 496

Query: 471 NKIFDILFVADENRCFQSLDQ 491
           +++ D L V    R ++ L +
Sbjct: 497 SRLLDKLNVPTSQRSWRHLQE 517


>gi|124027978|ref|YP_001013298.1| methionyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|187647727|sp|A2BLU2|SYM_HYPBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123978672|gb|ABM80953.1| Methionyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 572

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 145/546 (26%), Positives = 250/546 (45%), Gaps = 46/546 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A  Y N+ PH+G+    I+ ADV AR+ RL G DV+F +G+DEHG  I   A  
Sbjct: 3   RWIVASAWPYVNSIPHLGNLIGSILSADVFARYLRLKGEDVVFVSGSDEHGTPIEVEAIR 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  K   DQ     + + +   IS+D++ RT    H +  R    K+   G I++   
Sbjct: 63  RGVHPKQLTDQAHEYVKKLFEEFRISFDNYTRTENPVHKEFVREFMMKLYQNGYIFEQDD 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y  RD+ +  D  V                                  +    PV++
Sbjct: 123 VLPYCPRDKMFLPDRFVVGTCPYCGFEKAYGDQCDNCGRLLHPTELKNPRCSICGGPVEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + + +FF L   Q+K+  +        LP   +N  ++ +K GLK  S++R    WGI 
Sbjct: 183 RKSKHWFFNLPKLQEKVEKWLRESN---LPPNVKNYSLNMLKEGLKPRSVTRDN-KWGIP 238

Query: 220 --IPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFW----PADLHVIGKDILRF 270
              P      +YVW DAL  Y++ T              K+W       ++ IGKD + F
Sbjct: 239 APFPGAEGKTIYVWFDALLGYISATKEYGLKKGDPELWKKYWFNPETKTVYFIGKDNIPF 298

Query: 271 HAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           HAI  PA L+ +  P   P  + +  +++++GE+ SKS    I   E +E +  D  R+ 
Sbjct: 299 HAIILPAMLIGSGDPYVLPSYISATEYLMYEGEQFSKSRRWGIWIDEALEILPADYWRFA 358

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+R     KD  +      + VN ++ + IGN V R +  I   +  ++P PG+++++D+
Sbjct: 359 LIRMRPEAKDTNFTWSEFLRIVNTEMNDDIGNYVHRVLRFIESKFGSVVPEPGSYSDADK 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
                     +   +  +   + +AL +VI L  + ++Y + + PW+  KT+P  A+T +
Sbjct: 419 EFEKAIRETPRRAEKYFEEVRLKQALGEVIELARKGNQYLNTKAPWDKIKTDPKDAATTM 478

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKTFD 504
           Y+ V  +  LAILL  F P  A +++ +L +     +  R  Q+ +  +KPG  + K  +
Sbjct: 479 YLAVNSVATLAILLAPFTPDSAERLWKMLNLPGSVHEPGRWKQAGEMIIKPGHRIGKP-E 537

Query: 505 PIFPRF 510
            +F + 
Sbjct: 538 QLFRKL 543


>gi|221134806|ref|ZP_03561109.1| methionyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 685

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 132/532 (24%), Positives = 230/532 (43%), Gaps = 47/532 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  ++  RF ++ G         D HG  +   AQ 
Sbjct: 6   RKILVTSALPYANGSIHLGHLLEHIQTNIWTRFQKMRGHTCFSVCADDAHGTPVMLKAQE 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V +            DI YD++  T    +      ++ +++  G I K   
Sbjct: 66  LGITPEEMVTRTRAEHHQDLLDFDIDYDNYYVTHSDENKLLSETIYNRLNAAGYISKKTI 125

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           +  Y      +  D            E   G       A ++P +               
Sbjct: 126 NQLYDPEKGMFLPDRFVKGDCPKCGAEDQNGDSCDVCAATYSPTELKNPRSVVSGATPVL 185

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E YFF L  ++  L  + +S     +  E  N++  + + GL+   +SR    +G +
Sbjct: 186 KDSEHYFFDLPKFEGMLKDWIQSGA---IQSEMANKLQEWFEQGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IP+ P    YVW+DA   Y+ +   +    + +  ++W AD      H IGKDI+ FH +
Sbjct: 243 IPNAPGKYFYVWVDAPVGYMASFMNFCAGNNINFDEYWSADSDAELYHFIGKDIMYFHCL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE- 332
           +WPA L  AN   P  V  HGF+   G K+SKS G  I     +E +  + LRY+   + 
Sbjct: 303 FWPAMLEGANYRKPTGVNIHGFVTVNGAKMSKSKGTFIKARTYLEHLNPEYLRYYFASKL 362

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   ++VN+DL   + N+ SR  S I K +DG +      T  DE++L+
Sbjct: 363 NDSVTDIDLNFEDFTQKVNSDLVGKVVNIASRCASFITKKFDGKLSQ----TILDEALLN 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLY 449
             +   + I  + +N+  H A+ ++++L  + +++ D Q PW   K +PD+      V  
Sbjct: 419 EFTHASESIATHFENRQYHHAIREIMALADKANQFIDTQAPWVTIK-DPDQQQLTHDVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           + + + R L+I L   +P L+ K    L    +   + S    L  G  ++K
Sbjct: 478 MGIHMFRVLSIYLSPVLPDLSQKAQAFLN---DEFTWDSAQTTLT-GHEINK 525


>gi|71735657|ref|YP_273635.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123747684|sp|Q48LT7|SYM_PSE14 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71556210|gb|AAZ35421.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 682

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 220/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGT 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAGLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNFEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMGEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++     L  G      F  +  
Sbjct: 477 SLGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWEDHKTLL--GNHQLNPFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|68073399|ref|XP_678614.1| methionine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56499140|emb|CAH98022.1| methionine--tRNA ligase, putative [Plasmodium berghei]
          Length = 885

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 189/511 (36%), Positives = 293/511 (57%), Gaps = 12/511 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+TAI Y N +PH GHAYE+++AD LAR+HR  G DV FTTG DEHG KIA  A
Sbjct: 219 KNDNFYITTAINYVNGEPH-GHAYEIVLADTLARYHRNLGRDVFFTTGADEHGLKIANQA 277

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D N   F+ +   L  + D ++RTT   H    + +W K    GDIY G
Sbjct: 278 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVKNGDIYLG 337

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY++R+E Y  ++E             +  ++ M+E  YFFR+S YQD+LL +   
Sbjct: 338 EYEGWYNVREETYIPENEAKLMN--YIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQHIHD 395

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P+FI P + RNE++  +K  L+DLS SR  F WGI +P+DP+++MYVW+DAL NY +  
Sbjct: 396 NPDFIQPEKNRNEILQRLKEPLEDLSCSRTKFSWGIPVPNDPKHVMYVWMDALINYYSN- 454

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
                 D  K K+WPAD+H+IGKDI+ FHA+ +P  L+S N+ LPK +FSHGF+L   G+
Sbjct: 455 --CFINDQEKIKYWPADIHIIGKDIVWFHAVIFPTILMSINIELPKCIFSHGFVLAGDGK 512

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NVIDP E+IE  G DA R+ +V+E   G D  +D D L    N+DLA+ IGNL
Sbjct: 513 KMSKSLKNVIDPKEIIESYGSDAFRFHVVKESKRGYDMRFDVDNLVDMCNSDLADTIGNL 572

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R++S+ +   +  IP    + + D          +  I   M+N  +H+   + +++ 
Sbjct: 573 VQRTLSLCMLSNNAKIPPL--YDDIDIEFPLCMLHFINRIEYYMKNFHVHKFCEKTVNVC 630

Query: 422 SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++++     PW+ K+    ++   ++ + +E I  +A  +   +P +A++IF+ L   
Sbjct: 631 KDLNKFLTDLAPWKYKEESEKNKKLHIIRLMLESIYFIAHYIDIVIPMIASQIFNQLNTP 690

Query: 481 DENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +           L+ G +++     +F + 
Sbjct: 691 KKKIVDLNPWLNNLQEGVIINNDH-VLFKKI 720


>gi|297526914|ref|YP_003668938.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255830|gb|ADI32039.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 500

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 173/477 (36%), Positives = 266/477 (55%), Gaps = 13/477 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            YI+T I YPNA PHIGHAY  + ADV+AR+HRL G +V F TG DEHG K+ + A+  G
Sbjct: 5   FYITTPIYYPNAPPHIGHAYTTVFADVMARYHRLVGDEVFFITGNDEHGLKLQRVAEKKG 64

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  K FVD+ +  +R    +LDISYD FIRTT++ H  T +   +K+ DKG IYK  Y+G
Sbjct: 65  IHPKQFVDEMADVYRKYWGMLDISYDYFIRTTDEYHEKTVKTAIQKLYDKGLIYKASYAG 124

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E +Y+  E  +     Y      P++W+EEE Y+F+LS ++D ++   ++    
Sbjct: 125 WYCVDCEKFYSPGEYVEIDGKPYCPIHKKPLEWLEEETYYFKLSEFEDFIIDVLKNKDII 184

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
                    +    K GL+D+S++R      WGI++P D  Y +YVW DAL NY++  GY
Sbjct: 185 YPRSYALEVLGKVEKEGLRDVSIARPKERVWWGIEVPFDKNYTVYVWFDALLNYISGIGY 244

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           L++ D    K+WP   HVIGKDIL FH + W + L + ++ LPKK+  H F++++G KI 
Sbjct: 245 LEDMDR-FNKYWPNVHHVIGKDILWFHTVIWFSILKALDIELPKKLLVHAFLINRGLKIG 303

Query: 305 KSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           KS GNVI   ++I      D +RY L+R     KD     +      N++LA+ +GNL+ 
Sbjct: 304 KSAGNVIAIEDLINRYQDSDGVRYILMRVFNMDKDVDVSTELFDSIYNSELADTMGNLIR 363

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   +  K   G++       E ++ + +     L +  E M+   + RA+  V+ L+ +
Sbjct: 364 RIGVLAKKKLGGIVYK----REVNKELSTSIMETLNKYNEYMKTYDVSRAIQTVMDLLRK 419

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + Y +  +PWE  K +P +    LY  +E +R    +L   +PK A+KI +    +
Sbjct: 420 ANAYVNMTRPWE--KIDPGKE---LYSLLETVRASTTMLYPIIPKAASKISNAFGFS 471


>gi|145588832|ref|YP_001155429.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047238|gb|ABP33865.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 556

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/532 (25%), Positives = 228/532 (42%), Gaps = 47/532 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + +L +++A+ Y N Q HIGH  E +  D+  R+ R+ G +V +    D HG  I   
Sbjct: 3   SSQRRLLVTSALPYANGQIHIGHLVEYVQTDIWVRYQRMRGHEVHYVGADDTHGTPIMLR 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +    +  +   D   IS+D++  T    +    + ++ K+ D G I K
Sbjct: 63  AEKEGITPKELIANVWKEHKRDFDNFLISFDNYYTTDSPENEKLAQSIYLKLRDAGLIEK 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   A ++P              
Sbjct: 123 RAIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEKCGATYSPTDLKNPFSVVSGAT 182

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRK 212
                 + YFF+LS  + +      +  +  L  E RN++  +V     S L D  +SR 
Sbjct: 183 PIKKVSDHYFFKLSDPRCETFLREWTQVKTPLQPEARNKMKEWVGEPGDSKLGDWDISRD 242

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IPD P    YVW+DA   Y  +        G   + W          H IGKD
Sbjct: 243 APYFGFEIPDAPGKYFYVWLDAPIGYYASFLNYCQAKGLNFEEWVKPDTTTEQYHFIGKD 302

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDAL 325
           IL FH ++WPA L  A    P  VF+HGF+   GEK+SKS G +I    V       +  
Sbjct: 303 ILYFHTLFWPATLQFAGYRTPTNVFAHGFLTVDGEKMSKSRGTLISANSVIECGFNPEWF 362

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +     +D   +      RVN+DL     N+ SRS   ++K +DG++       
Sbjct: 363 RYYFATKLNDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFDGVVSDAAMSN 422

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR- 443
                +L   +   ++I    + +   +AL  ++ L  +V+ + D  KPWE+ K NP+R 
Sbjct: 423 P----LLQEIAAASEKIAGLYEAREYAKALRTIMDLADKVNAFVDENKPWEIAK-NPERE 477

Query: 444 --ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
               TV  VT+E  R L + L+  +P++A  + +   +  +N  +  ++  L
Sbjct: 478 ADLQTVCSVTLEAFRMLTLYLKPVIPQVAAGVEEFFSLEPQN--WADINTPL 527


>gi|332112154|gb|EGJ12130.1| methionyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 694

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 139/560 (24%), Positives = 224/560 (40%), Gaps = 64/560 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   HIGH  E I AD+  R  R+ G +V F    D HG  I  AA+ 
Sbjct: 12  RKLFVTTALPYANGPFHIGHVMEYIQADIWVRLQRMRGAEVRFVCADDAHGAPIMIAAEK 71

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I +D++  T    +H+  + ++  +     I     
Sbjct: 72  AGKTPQQFVADIAAGRKQYLDGFHIQFDNWHSTDGPENHELAQSIYLALKANDLIEVRTI 131

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +   A + P                 
Sbjct: 132 EQFFDPDKGMFLPDRFIKGECPKCGAKDQYGDNCEVCGAVYAPTDLKNPYSALSGATPVL 191

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRN--EVISFVKSG---LKDLSLSRKTF 214
              E +FF+LS  +        +    + P       E  +  ++G   L D  +SR   
Sbjct: 192 RTSEHFFFKLSDPRCVEYLESWTQDGRLQPEVANKVREWFTRDEAGQVSLGDWDISRDAP 251

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWP--ADLHVIG 264
            +GI+IP  P    YVW+DA   YL +                       P    +H IG
Sbjct: 252 YFGIEIPGAPGKYFYVWLDAPVGYLASLKNWFVKNVPGDAAAAFDAYLAQPELEQVHFIG 311

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVD 323
           KDI+ FH ++WPA L  +    P +V+ HG +   GEK+SKS G  I P+  +   +  +
Sbjct: 312 KDIVTFHTLFWPAMLKFSGRKTPDRVYVHGHLTVSGEKMSKSRGTGISPLRYLELGLDAE 371

Query: 324 ALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY++  +  A  +D  ++ +    RVNADL     N+ SR+   + K + G +     
Sbjct: 372 WLRYYIAAKLNARVEDLDFNPEDFVARVNADLVGKYVNIASRAAGFLAKRFGGRLT--AD 429

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-- 440
                 ++L         + E+ + +   +AL +V+ L   V+ Y D  KPWEL K    
Sbjct: 430 VGVEGRALLDGLRAHAGVVLEHYETREYGKALREVMLLADRVNEYVDQNKPWELAKQQGA 489

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-------------CFQ 487
             R   V  V +E  R L + L+  +P  A ++   L +A                  F 
Sbjct: 490 EARLHDVCTVCIEAFRLLTLYLKPVLPATAARVEAFLGIAPLAWDDAARALGAHTIGAFS 549

Query: 488 SLDQRLKPGFMLHKTFDPIF 507
            L QR+ P     K  + +F
Sbjct: 550 HLLQRVDP-----KKLEALF 564


>gi|325268659|ref|ZP_08135289.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989187|gb|EGC21140.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 712

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 240/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  
Sbjct: 26  MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVP 85

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  GVT +   D+  +  +D  +   IS+D + RTT   H+      ++K+ D G
Sbjct: 86  ITIRAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDG 145

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 146 KLVEKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTI 205

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 206 SGSQPVIRKTKNWYLPLNNYQEWLKQWILKDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 264

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + D  +    + W  D     +H 
Sbjct: 265 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHF 323

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH + +P          LP  V ++ F+  +  KIS S    +   E + +  
Sbjct: 324 IGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFE 383

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P 
Sbjct: 384 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPA 443

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D   +     V +++   ++      A  + ++L    ++Y    +PW++ KT
Sbjct: 444 CGELHDVDRQTIQEFKDVKEKVEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKT 503

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+L ++++++  L+I  + F+P  + K+  ++ + + +         L  G  L
Sbjct: 504 DPKRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTEYDWSELGSTDLLPAGKQL 563

Query: 500 HKT 502
            + 
Sbjct: 564 AEP 566


>gi|26987833|ref|NP_743258.1| methionyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|37999413|sp|Q88NV7|SYM_PSEPK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24982533|gb|AAN66722.1|AE016300_7 methionyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 679

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 127/545 (23%), Positives = 223/545 (40%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSDENRELSSLIYSRLREAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWHEGSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  A    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  +G++    A  E  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGDAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  + +   RA+ ++++L    + +   + PW L K     D   
Sbjct: 418 EAFLA----AAPSIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 474 AICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVAP--LTWNDHLTRLE-NHQLN-PFKA 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|307186752|gb|EFN72197.1| Methionyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 540

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 181/501 (36%), Positives = 273/501 (54%), Gaps = 24/501 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA PHIGH Y  ++AD +AR++ + G    FTTGTDEHG KI  AA  
Sbjct: 13  QNKYITTPIFYVNAGPHIGHLYSAVLADAVARYNTMLGHKTFFTTGTDEHGNKIKVAAVA 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    +    S+ F++M D  ++ Y  FIRTTEK+H+D     WK++ ++G IY G Y
Sbjct: 73  AGLPNLEYCTNISQQFKEMCDRFEVDYSRFIRTTEKQHYDAVHHFWKRLEERGHIYLGKY 132

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSY 179
           SGWY + DEA+ +D E+ +  D      +      N V+W EEE Y FRLSA+QD L  +
Sbjct: 133 SGWYCVSDEAFLSDTELVEQRDPTGKIIKVSAQSGNTVEWTEEENYKFRLSAFQDDLKHW 192

Query: 180 YESHPEFILPIERRNEVISFVKSG--LKDLSLS--RKTFDWGIKIPDDPQYIMYVWIDAL 235
            +     I P      +  +++ G  L+DLS++  R    W +  P D  + +YVW+DAL
Sbjct: 193 LKDENT-IKPALYHKMLSEWIEEGSCLQDLSITRIRSKVPWAMPSPCDESHSIYVWMDAL 251

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   PD S  +FWP  + VIGKDIL+FH +YWPAFL++A L  PK +  H  
Sbjct: 252 INYLTALGY---PDESFKEFWPPTIQVIGKDILKFHGVYWPAFLIAAGLEPPKTLLCHAH 308

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                +K+SKS GNVI P E   +   D LRYF++RE     D  Y    +   +N++LA
Sbjct: 309 WTVDHQKMSKSKGNVISPFEAANDYSEDGLRYFILREAVPQNDANYSSKKIVNVLNSELA 368

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLI 410
           + +GNLV+R     + +     P P  +     ++  +        V ++ RE+ +   +
Sbjct: 369 DTLGNLVNRCAGKTI-NPSKEFPDPAKYWNVLQSQVADETRKALESVGRKARESYEEYNL 427

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAF 465
           H  +  V++++   +R  D  +PW+L+K   D         V+ + +E  R  A++L   
Sbjct: 428 HHVVDAVMNMLHCANRMIDYHEPWQLRKQIDDANSIRELKAVISLALESSRIAALILYPI 487

Query: 466 VPKLANKIFDILFVADENRCF 486
            P+L++ + D L +  ENR +
Sbjct: 488 TPRLSSNLLDFLNIPRENRTW 508


>gi|300727443|ref|ZP_07060852.1| methionine--tRNA ligase [Prevotella bryantii B14]
 gi|299775323|gb|EFI71922.1| methionine--tRNA ligase [Prevotella bryantii B14]
          Length = 691

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 126/543 (23%), Positives = 248/543 (45%), Gaps = 43/543 (7%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+++  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  
Sbjct: 1   MEQKNYKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKKDVIFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  ++  +   IS+D + RTT + H+      +KK+ D+G
Sbjct: 61  ITIRAKKEGITPQDVCDRYHKIIKESFEEFGISFDIYSRTTSETHNKLASDFFKKLYDEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +     +Y      +  D  +             G   +   +  +P++ +      
Sbjct: 121 KLIEKDSDQYYDEEAHQFLADRYIMGECPHCHNPKAYGDQCEKCGSDLSPMELINPYSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSKPVIKTTKNWYLPLNEYQEWLKQWILEGHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + +  K    + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDKEPEKFGNWEQWWKDPETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +P       +  LP  V ++ F+  + +KIS S    +   E +++  
Sbjct: 299 IGKDNIVFHCVIFPTMLKAHGDYILPDNVPANEFLNLENDKISTSRNWAVWLDEYLKDFP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWNGIVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E D++ +     V +++   +       A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELQEVDKNAIQEFKDVKEKMEAFLDIFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  LAI  + F+P  +  +  ++ +   +       + LKPG  L
Sbjct: 479 DPKRVETILYISLQLVANLAIAFEPFLPFSSKDLRQLINLNSFDWSELGSTELLKPGHQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|121997514|ref|YP_001002301.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|187647725|sp|A1WUY7|SYM_HALHL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121588919|gb|ABM61499.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 679

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 129/541 (23%), Positives = 228/541 (42%), Gaps = 48/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+ ARF RL G +  +    D HG  I   A+ 
Sbjct: 3   RRILVTSALPYANGPIHLGHLVEYIQTDIWARFQRLRGNECYYVCADDAHGTPIMLKARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  +++ + + +       I +D +  T    +     ++++++   G I +   
Sbjct: 63  RGVDPEQLIEEMAASHQADFADFLIGFDRYHSTHSAENRHFAELIYQRLEAGGHIERHTI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              Y   +  +  D  +             G   +   A + P +               
Sbjct: 123 EQLYDPGEGMFLPDRYIKGTCPRCAAPDQYGDSCEACGATYTPAELQDPVSVISGERPEV 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FFRL  ++  L    +      L  E  N++  + ++GL+D  +SR    +G +
Sbjct: 183 RESEHFFFRLQDFEALLR---QWASAEHLQPEIINKLNEWFEAGLRDWDISRDAPYFGFR 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-------LHVIGKDILRFH 271
           IP       YVW+DA   Y+ +     +        FW A         H IGKDI  FH
Sbjct: 240 IPGTEDKYFYVWLDAPIGYMASFRRLAEERGIDFDAFWDAGRAEETELYHFIGKDIAYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WPA L  A    P  V+ HGF+   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 300 TLFWPAMLHGAGYRTPTAVYCHGFLTVNGQKMSKSRGTFITARSYLDHLDPEYLRYYTAA 359

Query: 332 EIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D     D   +RVN+D+   + N+ SR    I K +DG +    +  E    +
Sbjct: 360 KLSDSVEDIDLSFDDFVQRVNSDVVGKLVNIASRCAGFITKRFDGRLAPRLSAPE----L 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV--- 447
               +   + I E  + +   RA+ +++ L  + ++Y DA+KPWE  K +P++A  V   
Sbjct: 416 FRTFTASAERIAELYEQREYARAVREIMHLADQANQYIDAEKPWERIK-DPEQARAVQEI 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLKPGFMLHKTFD 504
             + + + R L I ++  +P+LA      L +            LD  +     L    D
Sbjct: 475 CTMGLNLFRVLIIYIKPIMPRLAEDAEAFLAIGPLAWADVQAPLLDHGINKFKPLKTRID 534

Query: 505 P 505
           P
Sbjct: 535 P 535


>gi|327312639|ref|YP_004328076.1| methionine--tRNA ligase [Prevotella denticola F0289]
 gi|326945094|gb|AEA20979.1| methionine--tRNA ligase [Prevotella denticola F0289]
          Length = 687

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 240/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  GVT +   D+  +  +D  +   IS+D + RTT   H+      ++K+ D G
Sbjct: 61  ITIRAKKEGVTPQDVCDRYHKLIKDSFEEFGISFDVYSRTTSPTHNKFASDFFRKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLVEKESEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTI 180

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSQPVIRKTKNWYLPLNNYQEWLKQWILEDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + D  +    + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSDPERFGSWQKWWQDPETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH + +P          LP  V ++ F+  +  KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFE 358

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWDGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D   +     V +++   ++      A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELHDVDRQAIQEFKDVKEKLEAYLEAFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+L ++++++  L+I  + F+P  + K+  ++ + + +         L  G  L
Sbjct: 479 DPKRVETILNLSLQLVANLSIAFEPFLPFSSKKLRSMINMTEYDWSELGSTDLLPAGKQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|28871289|ref|NP_793908.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999383|sp|Q87XN0|SYM_PSESM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28854539|gb|AAO57603.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331015679|gb|EGH95735.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 682

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 128/542 (23%), Positives = 228/542 (42%), Gaps = 41/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D  +             G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDTMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVDANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKTFD 504
            + V + RQL I L+  +P LA      L VA    D+++   +   +L P   L    D
Sbjct: 477 ALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLT-HHQLNPFSALMTRID 535

Query: 505 PI 506
           P+
Sbjct: 536 PL 537


>gi|299066020|emb|CBJ37201.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum CMR15]
          Length = 688

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 133/531 (25%), Positives = 216/531 (40%), Gaps = 46/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C  ++ K+ +K  I 
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLKEKDLID 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 120 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 180 TPVRKSSEHYFFKLSDPRCETFLRDWVG-DLAQPEATNKMREWLGDEGESTLSDWDISRD 238

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 239 APYFGFEIPGTPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSPHSTTEQYHFIGKD 298

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 299 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 358

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 359 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALAN 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 419 P----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQRD 474

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           R      V +E  R LA+ L+  +P    +I   L V  E   ++++D +L
Sbjct: 475 RLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNV--EPLNWRAIDAQL 523


>gi|15236350|ref|NP_193114.1| methionine--tRNA ligase, putative / methionyl-tRNA synthetase,
           putative / MetRS, putative [Arabidopsis thaliana]
 gi|12230648|sp|Q9SVN5|SYM_ARATH RecName: Full=Probable methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4455307|emb|CAB36842.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana]
 gi|7268082|emb|CAB78420.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana]
 gi|17381106|gb|AAL36365.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20259315|gb|AAM14393.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 797

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 121/557 (21%), Positives = 227/557 (40%), Gaps = 55/557 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 15  GKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETK 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T K   D+     +++ D   IS+D F RT+     + C+ ++ K+ D   + +
Sbjct: 75  ALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQAIFNKLWDNKWLSE 134

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    + +  D  V              +G   +      NP +  + +     
Sbjct: 135 NTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKCKVCQ 194

Query: 165 --YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L   +   E                     ++++ GL+   ++R  
Sbjct: 195 NTPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAWLRDGLRQRCITRD- 253

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T      +  K    P ++     +GKD +
Sbjct: 254 LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITS-CYTSEWEKWWKNPENVELYQFMGKDNV 312

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+  L    N  L K +    ++ ++  K SKS G  +   +V +  + V+  
Sbjct: 313 PFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGNDVKDTNIPVEVW 372

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N +L + +GN V+R +S I K     Y  +IP   
Sbjct: 373 RYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDNAGYGSVIPDAH 432

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                   +S+     + + E  E M+   + + L   + + SE + Y  A + W+L K 
Sbjct: 433 DAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYYLQASQFWKLYKE 492

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-----ENRCFQSLDQR-- 492
           +    + V+     ++  LA LL+ F+P  + ++F  L +       + R    L  R  
Sbjct: 493 DKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQFSLSDERGEVLLASRPW 552

Query: 493 --LKPGFMLHKTFDPIF 507
             L P   +  T  P+F
Sbjct: 553 DILPPSHRIG-TPQPLF 568


>gi|126667556|ref|ZP_01738526.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627982|gb|EAZ98609.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 679

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 129/542 (23%), Positives = 235/542 (43%), Gaps = 47/542 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+ AR+ +L G    +    D HG  I   
Sbjct: 7   KQKRDILVTSALPYANGPIHLGHLLEYIQTDIWARYQKLRGHTCYYVCADDAHGTAIMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  +D+  +  +       I +D++  T    +      +++++   G I  
Sbjct: 67  AEREGITPEQLIDRIRQEHQQDFGDFLIRFDNYYTTHSDENRQFSEFIYRQLQQSGHIAT 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM---------- 160
              +  +      +  D  +             G + +   A ++P + +          
Sbjct: 127 RTITQSFDPEKNMFLADRFIKGTCPKCKTDDQYGDNCEVCGATYSPTELINPRSAVSGAT 186

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF+L  + D L  +  S     L  +  N++  ++ +GL D  +SR    +
Sbjct: 187 PIEKESEHFFFKLPDFADFLAKWTRSGT---LQPQVANKLAEWLDAGLHDWDISRDAPYF 243

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G ++PD P    YVW+DA   YL +          +   FW AD      H IGKDI+ F
Sbjct: 244 GFEVPDAPGKYFYVWLDAPIGYLASFKNLCVREGINFEHFWKADSTAEVYHFIGKDIINF 303

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L       P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 304 HALFWPAILHDTGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDFLNPEYLRYYFA 363

Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + D    RVN+DL   + N+ SRS   I K +DG     G  TE ++ 
Sbjct: 364 AKLTGGVDDMDLNLDDFAARVNSDLVGKVVNIASRSAGFISKRFDG---KLGQVTEINK- 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTV 447
            L+      +E+    +N+   RA+ +++ L    ++Y + ++PW + K     ++   +
Sbjct: 420 -LNEFIDAGEELAGYYENREFGRAMRRIMELADIANQYVNDEQPWVVAKQKGEDEKLQAI 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L   +PK A+     L        + +  + L+    ++K F P+ 
Sbjct: 479 CTNALNMFRLLMTYLAPVLPKTADASEAFLNA---KLDWNNRAELLQ-DHGINK-FQPLM 533

Query: 508 PR 509
            R
Sbjct: 534 SR 535


>gi|254429828|ref|ZP_05043535.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195997|gb|EDX90956.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 684

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 126/545 (23%), Positives = 220/545 (40%), Gaps = 48/545 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +   K+ +++A+ Y N   H+GH  E I  D+  RF +L G    +    D HG  I 
Sbjct: 8   MSDTPRKILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGQQCTYVCADDAHGTAIM 67

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  + Q   +         +++D++  T    +     +++++  D G I
Sbjct: 68  LKAEENGVTPEQQIAQVKADHERDFADFQVNFDNYYSTHSAENRALSEMVFQRNKDAGYI 127

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM-------- 160
            +   +  Y  +   +  D            E   G + +   A + P + +        
Sbjct: 128 LEKTITQLYDPQKGMFLADRFVKGTCPKCKSEDQYGDNCEVCGATYTPAELIDPYSSVSG 187

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E    FF L  ++  L  +  S         +  E I      L+   +SR+  
Sbjct: 188 ATPVEKETTQLFFDLPKFEPLLREWTRSGALQEQVANKLQEWIED----LQPWDISREAP 243

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP  P    YVW+DA   Y+ +   Y D    S   +W  D      H IGKDI+
Sbjct: 244 YFGFEIPGYPGKYFYVWLDAPIGYMASFQNYCDREGLSFDDYWGKDSTAELYHFIGKDII 303

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A L  P  ++SHGF+   G K+SKS G  I     ++ +  + LRY+
Sbjct: 304 NFHGLFWPAMLDGAGLRKPTAIYSHGFVTVNGAKMSKSRGTFIKARTYLDHLSPEYLRYY 363

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++    D   + +   +RVN+DL   + N+ SR+ + + K    +           
Sbjct: 364 FAAKLSSRVDDFDLNLEDFAQRVNSDLVGKLVNIASRTGNFVKKFGGTLSTDLDNMM--- 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
             ++         I +  + +   +A+ ++++L    + Y   + PW L K         
Sbjct: 421 --LVREVQEAGPRIADFYEKREFGKAMREIMALADHANGYIADKAPWSLAKEEGKEQEVL 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + V R L I L+  +P LA +    + V  E   +   DQ L  G  + K F P
Sbjct: 479 AICSTAINVFRLLVIYLKPVLPALAERAEAFMQV--EPLTWADADQLLL-GHEIAK-FKP 534

Query: 506 IFPRF 510
           +  R 
Sbjct: 535 LLNRI 539


>gi|213970875|ref|ZP_03398998.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301383774|ref|ZP_07232192.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302059918|ref|ZP_07251459.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130517|ref|ZP_07256507.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213924398|gb|EEB57970.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 682

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 128/542 (23%), Positives = 228/542 (42%), Gaps = 41/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D  +             G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDTMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKTFD 504
            + V + RQL I L+  +P LA      L VA    D+++   +   +L P   L    D
Sbjct: 477 ALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLT-HHQLNPFSALMTRID 535

Query: 505 PI 506
           P+
Sbjct: 536 PL 537


>gi|66360370|ref|XP_627239.1| methionyl-tRNA synthetase of possible bacterial origin
           [Cryptosporidium parvum Iowa II]
 gi|46228842|gb|EAK89712.1| methionyl-tRNA synthetase of possible bacterial origin
           [Cryptosporidium parvum Iowa II]
          Length = 581

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 181/519 (34%), Positives = 292/519 (56%), Gaps = 18/519 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y +TAI Y N  PH+GHAYE++ +D+L R  RL G +  F TGTDEHGQKIA  A+ 
Sbjct: 33  KYYYFTTAINYTNGTPHMGHAYEIVTSDILVRIARLFGFNTRFQTGTDEHGQKIAATAEK 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K   D+N + F++M + L IS D FIRTT+  H+++C+ LW++   KGDIY G Y
Sbjct: 93  KGISPKELCDENVKQFKNMNEKLQISTDRFIRTTDADHYESCKELWRRCEAKGDIYLGKY 152

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY++R+E++  + E               P+  MEE  YFFR++ Y + + ++   +P
Sbjct: 153 NGWYNVREESFMTELEAKMLN--YTDPISGLPLTKMEEPSYFFRITNYLESIKNHIIDNP 210

Query: 185 EFILPIERRNEVISFVK---SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           EFI P   R  +++ ++   S  +DLS+SR +F WG+ +P+D +++MYVW DALTNY+T 
Sbjct: 211 EFIQPESSRESILARLEALGSDSEDLSISRASFSWGVPVPNDQEHVMYVWFDALTNYITG 270

Query: 242 TGYLDNPDGSKA-----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
             + D  +  +      K+W   +H++GKDI  FH++ WPA LLS  L LPK +F+HGF+
Sbjct: 271 LKWADFDNDLEENSLFNKYWENTVHIVGKDITWFHSVIWPAMLLSVGLSLPKTIFAHGFV 330

Query: 297 LH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP E I+++G D  RY+L RE   G D  Y    +    N +LA
Sbjct: 331 TAPDGKKMSKSLGNVVDPFEQIDKIGSDPFRYYLAREGRFGNDIKYQPSSVIDYNNGELA 390

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +  GNL+SR  ++  K   G+ P+       D+ +      V +E         I   + 
Sbjct: 391 DTYGNLISRITNLTHKFCQGVAPSLSQSLLLDKPV--DIDTVFEEYYLAWNCFRIDECIQ 448

Query: 416 QVISLVSEVDRYFDAQKPWELK--KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             + L   ++++     PW     K++ +R   ++ + +E    ++ILL  F+     ++
Sbjct: 449 IAMDLSRNINKFLTDHAPWNKDNGKSDEERIE-IIRIVLEGSYYISILLSPFITLACKEV 507

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRFL 511
           F+ L   ++      ++   +KPG  +    +P+F R +
Sbjct: 508 FNRLGTPEKIIPEVDINYNNIKPGTPIL-IGEPLFKRIV 545


>gi|330877326|gb|EGH11475.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 682

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 128/542 (23%), Positives = 228/542 (42%), Gaps = 41/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D  +             G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDTMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKTFD 504
            + V + RQL I L+  +P LA      L VA    D+++   +   +L P   L    D
Sbjct: 477 ALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLT-HHQLNPFSALMTRID 535

Query: 505 PI 506
           P+
Sbjct: 536 PL 537


>gi|329119551|ref|ZP_08248235.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464338|gb|EGF10639.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 691

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 126/555 (22%), Positives = 218/555 (39%), Gaps = 54/555 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K+ +++A+ Y N   H+GH  E I  D+  RF +L G D  +    D HG  +  
Sbjct: 1   MTQKRKILVTSALPYANGSIHLGHMVEHIQTDIWVRFQKLRGHDCRYCCADDTHGTPVML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ   V  +  + +             I YD++  T    + +    ++  +   G I 
Sbjct: 61  AAQKQDVQPEDMIARVREEHLADFTGFLIGYDNYYSTHSPENKELSEKIYLALKANGKIE 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
                  +      +  D  V             G + +     ++P + +         
Sbjct: 121 SRTIEQLFDPEKHMFLPDRFVKGECPKCHAADQYGDNCEVCGTTYSPTELIKPYSAVSGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYY--------ESHPEFILPIERRNEVISFVKSG---L 204
                E E +FF+L    D L  +               + P           K G   L
Sbjct: 181 TPVLKESEHFFFKLGKCADYLKQWTAGSTTLPDGREQPHLQPEALNKMNEWLGKDGETTL 240

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD---- 259
            D  +SR    +G +IP  P    YVW+DA   Y+ +              ++  D    
Sbjct: 241 SDWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYMASFKNLCARAGIEFDDYFRTDSDTE 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVI 317
             H IGKDIL FHA++WPA L  +    P  VF+HGF+   G+K+SKS G  I     + 
Sbjct: 301 MYHFIGKDILYFHALFWPAMLHFSGHRAPTGVFAHGFLTVDGQKMSKSRGTFITAKSYLE 360

Query: 318 EEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G 
Sbjct: 361 QKLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGS 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +           ++L   +   + I    + +   RAL  +++L   V+ Y DA KPWEL
Sbjct: 421 LKDVSGS-----ALLKKLAAESETIAAAYEEREYARALRDIMALADAVNEYTDANKPWEL 475

Query: 437 KKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            K      R   V    +     L++ L   +P++A +    L +      +    Q L 
Sbjct: 476 AKQAGQEVRLHEVCSELINAFAVLSVYLAPVLPRVAEQAAAFLNIP--ALSWDIAAQTLP 533

Query: 495 PGFMLHKTFDPIFPR 509
            G  ++K ++ +  R
Sbjct: 534 AGHAINK-YEHLMQR 547


>gi|121595776|ref|YP_987672.1| methionyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|187645702|sp|A1WBH1|SYM_ACISJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120607856|gb|ABM43596.1| methionyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 688

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 142/542 (26%), Positives = 231/542 (42%), Gaps = 50/542 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K++++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 4   RKIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSPENHELSQQIYLDLKAAGFIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +  ++ + P   +             
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPYSALSGAKPVL 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E   ++  +             GL D  +
Sbjct: 184 KTSEHFFFKLSDPRAVEFLTEWTQNGQHVQPEVAAKIKEWFGTRTNPDGTTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLNKRGEDYDAYMADPQLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P K+  HGF+  + GEK+SKS G  +DP++ +   +  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYLALGMNP 363

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   I K + G     G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMARVNSDLIGKYVNIASRAAGFIFKRFGG---KLG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +   +++L+        I    + +   RA+ + + L   V+ Y DA KPWEL K   
Sbjct: 421 EVSADGQALLAQLREQAGPIVAAYEARDTARAVRETMLLCDRVNSYVDANKPWELAKQEG 480

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L+  +P++A ++   L V  E   F  + Q L  G  +
Sbjct: 481 MEARLQDVCTTCIEAFRILTIYLKPILPQVAAEVARFLIVPPEQ--FAEVAQPLGAGHQI 538

Query: 500 HK 501
            +
Sbjct: 539 GQ 540


>gi|222111976|ref|YP_002554240.1| methionyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782860|sp|B9MEX0|SYM_DIAST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221731420|gb|ACM34240.1| methionyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 688

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 142/542 (26%), Positives = 231/542 (42%), Gaps = 50/542 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K++++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 4   RKIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSPENHELSQQIYLDLKAAGFIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +  ++ + P   +             
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPYSALSGAKPVL 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E   ++  +             GL D  +
Sbjct: 184 KTSEHFFFKLSDPRAVEFLTEWTQNGQHVQPEVAAKIKEWFGTRTNPDGTTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLNKRGEDYDAYMADPQLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P K+  HGF+  + GEK+SKS G  +DP++ +   +  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYLALGMNP 363

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   I K + G     G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMARVNSDLIGKYVNIASRAAGFIFKRFGG---KLG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +   +++L+        I    + +   RA+ + + L   V+ Y DA KPWEL K   
Sbjct: 421 EVSADGQALLAQLREQAGPIVAAYEARDTARAVRETMLLCDRVNSYVDANKPWELAKQEG 480

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L+  +P++A ++   L V  E   F  + Q L  G  +
Sbjct: 481 MEARLQDVCTTCIEAFRILTIYLKPILPQVAAEVARFLIVPPEQ--FAEVAQPLGAGHQI 538

Query: 500 HK 501
            +
Sbjct: 539 GQ 540


>gi|104780428|ref|YP_606926.1| methionyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|122985938|sp|Q1IDZ3|SYM_PSEE4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|95109415|emb|CAK14115.1| methionyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 679

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 126/545 (23%), Positives = 225/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSEENRELSGLIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
               + ++      +  D            E   G + +   A + P +    +      
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L  +  S     L     N++  ++ SGL++  +SR    
Sbjct: 181 TPVLRDSQHFFFKLPDFQAMLQQWTRSGT---LQDAVANKLAEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW         H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWSEGSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA L  +    P  V  HG++   G K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMLEGSGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K  DG++    A  +  
Sbjct: 358 YAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVAGDAAPDLT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           E+ L+        I E  +++   RA+ ++++L    + +   + PW L K     +   
Sbjct: 418 EAFLA----AAPSIAEAYESRDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQEEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +     RL+    L+  F  
Sbjct: 474 AICAQGINLFRQLVIFLKPVLPLLAADAEAFLNVAP--LTWNDHLSRLE-NHKLN-PFKA 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMSRI 534


>gi|300690748|ref|YP_003751743.1| methionyl-tRNA synthetase (methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum PSI07]
 gi|299077808|emb|CBJ50446.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum PSI07]
          Length = 688

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 134/537 (24%), Positives = 217/537 (40%), Gaps = 46/537 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHLVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   IS+D++  T    + D C  ++ K+ + G I 
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFLISFDNYYSTDSDENRDLCERVYLKLKEAGLID 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 120 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 180 TPVRKSSEHYFFKLSDPRCETFLREWVA-DLAQPEATNKMREWLGDEGESTLSDWDISRD 238

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 239 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKD 298

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 299 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWL 358

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 359 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALAN 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 419 P----LMVQLREAAPQIADLYEKREYSKALRAVMDLADAVNAYVDTEKPWDLAKDEAQRD 474

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +      V +E  R LA+ L+  +P    +I   L V  E   ++++D +L     +
Sbjct: 475 KLHAACSVALEAFRLLAVYLKPILPNTVGRIEAFLNV--EPLNWRAIDAQLSSAQPI 529


>gi|319764075|ref|YP_004128012.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823650|ref|YP_004386953.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317118636|gb|ADV01125.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329309022|gb|AEB83437.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 689

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 145/542 (26%), Positives = 231/542 (42%), Gaps = 50/542 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K++++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 4   RKIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVDFVGADDAHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H   + ++  +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWHSTDAPENHALAQQIYLDLKANGLIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +   A + P + +             
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCGAVYAPTELINPYSALSGAKPQL 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E   ++  +            SGL D  +
Sbjct: 184 KTSEHFFFKLSDPRCVEFLKEWTQDGVHVQPEVAAKIKEWFGTRTNPDGSTSSGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L    G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLLARRGQDYAAYMADPALEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P K+  HGF+  + GEK+SKS G  +DP++ +   +  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLGMNP 363

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ +    RVNADL     N+ SR+   I K + G     G
Sbjct: 364 EWLRYYLGAKLNGRNEDIDFNPEDFMARVNADLIGKYVNIASRAAGFITKRFGG---KLG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +E  +++L+        I    + +   RA+ + + L   V+ Y DA KPWEL K   
Sbjct: 421 TVSEDGQALLAQLRAHKDAIVAAYEARDTARAVRETMLLCDRVNAYVDANKPWELAKKEG 480

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L+  +P++A  +   L V  E   F  +D+ L  G  +
Sbjct: 481 MEARLQDVCSTCIEAFRILTIYLKPILPQVAADVAAFLIVPPEQ--FDGVDRPLGAGHQI 538

Query: 500 HK 501
            +
Sbjct: 539 GQ 540


>gi|172061392|ref|YP_001809044.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|226710896|sp|B1YUT2|SYM_BURA4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|171993909|gb|ACB64828.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 720

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 137/547 (25%), Positives = 228/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G + +   + + P + +          
Sbjct: 135 RAIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     +  I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLRDAIASIAAHYEGREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ----SLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     VA           S  Q +K    
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVAPLAWADAAKPLSSAQPIKAYQH 548

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 549 LMTRVDP 555


>gi|33303701|gb|AAP22258.1| methionyl-tRNA synthetase [Bacillus cereus]
          Length = 397

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 181/397 (45%), Positives = 271/397 (68%), Gaps = 8/397 (2%)

Query: 33  VLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
            +AR+ R+ G +V + TGTDEHGQKI K A+   VT + +VD      +++ + +DISYD
Sbjct: 1   AMARYKRMQGYNVHYLTGTDEHGQKIQKKAEELNVTPQAYVDNIVAGIKELWEKMDISYD 60

Query: 93  DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYN 151
           DFIRTTE RH D    ++K++ D+GDIY   Y GWYS++DE +Y + + V    +G    
Sbjct: 61  DFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSVQDETFYTEHQLVDPIMEGDKVV 120

Query: 152 AQHNP-----VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLK 205
              +P     V+ + EE YFFR+  Y D+LL +YE +P FI P  R+NE+I+   K GL+
Sbjct: 121 GGKSPDRGHDVELVREESYFFRMGKYVDRLLKFYEENPHFIQPESRKNEMINNFIKPGLE 180

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           DL++SR +FDWG+++P +P++++YVW+DAL+NY+T  GY    +    KFWPAD+H++GK
Sbjct: 181 DLAVSRTSFDWGVRVPGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGK 240

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +I+RFH IYWP  L++ +LPLPKKVF+HG+IL K  K+SKS GNV+DP+ +I+  G+DAL
Sbjct: 241 EIVRFHTIYWPIILMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDAL 300

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFT 384
           RY+L+RE+  G DG +  +G  +R+N DLAN +GNL++R+V+MI K ++G IP      T
Sbjct: 301 RYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLLNRTVAMIDKYFNGEIPAFKENVT 360

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           E DE++++     L+++ E M+N     AL+ +  LV
Sbjct: 361 EFDETLVTFAKDTLKKVEEAMENMEFSVALSSIWQLV 397


>gi|289676763|ref|ZP_06497653.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 682

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 224/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFNAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKILLTNHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|291320134|ref|YP_003515392.1| methionyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752463|emb|CBH40435.1| Methionyl tRNA synthetase (Methionine tRNAligase) [Mycoplasma
           agalactiae]
          Length = 530

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 153/484 (31%), Positives = 260/484 (53%), Gaps = 7/484 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y   +A + A + ++ G DV F TG+DEHGQKI + A 
Sbjct: 2   KKTFYITTPIYYTSGPLHIGHLYCTTVAWIFANYKKILGYDVKFLTGSDEHGQKIEQKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A    + +VD+   +++ M    +I+YD F RT++ +H    + ++ K  + G IYKG 
Sbjct: 62  AANKDPQTYVDELVDSYKKMWQRYNINYDYFSRTSDPKHMKMVQSIFTKFLELGFIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +   ++        Y+    + +  M EE YFF++  +Q+  L   E++
Sbjct: 122 YDGLYSVNDEEFLTKNQAVLKDGEYYHPVSGHKLILMSEESYFFKMKEFQNWWLKEVENN 181

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           P+++LP +  NE+I +FV  GL+DLS++R   +WGIK  +DP++ +YVW+DAL NY++  
Sbjct: 182 PQWLLPAKMTNEMITNFVSEGLEDLSVTRTNINWGIKTNEDPKHTLYVWLDALFNYVSAL 241

Query: 243 GYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            +       +   +  +    +H+IGK+I RFH IYW  F  +  + +P K+++HG +  
Sbjct: 242 DFDLENPSDEYLKYWQNGDEIVHIIGKEISRFHFIYWTIFTKALGIKIPTKIYAHGLLRD 301

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSL NVI+P  +  +   + ++Y+    I+ G+DG + +D L   VN++L N 
Sbjct: 302 KDGRKMSKSLNNVIEPEYLFSKYDDEMIKYYFASAISFGEDGNFSEDKLIDIVNSELVNN 361

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNLVSR+V MI   +   +    +       I    +    +  E M    + +AL   
Sbjct: 362 YGNLVSRTVKMISNSFPEGLIYRQSSKIEHLEIEEKINSFSSKFIELMDEFKLDKALEYS 421

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++L   +++Y D  KPW L    + +    +L   +  I  ++  LQ  +P    ++   
Sbjct: 422 MNLSDALNKYIDILKPWTLTAHEHKEELENILVRLLNGIYAVSWSLQIVMPNKIAEVAKA 481

Query: 477 LFVA 480
           L V+
Sbjct: 482 LNVS 485


>gi|167624305|ref|YP_001674599.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083264|sp|B0TJ05|SYM_SHEHH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167354327|gb|ABZ76940.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 679

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 133/542 (24%), Positives = 230/542 (42%), Gaps = 48/542 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+ +RF +L G +  +    D HG  I   A
Sbjct: 4   SQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+  +  + Q  +         +I +D+F  T    + +    ++ K+ D G I   
Sbjct: 64  QQMGIAPEEMIAQVQKEHEKDFADFNIQFDNFHSTHSDENRELASQVYIKLRDAGYIKTK 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE--------- 162
             S  +      +  D            E   G +     A ++    ++          
Sbjct: 124 TISQLFDPEKSMFLPDRFVKGTCPRCKSEDQYGDNCDNCGATYSTTDLIDPRSAVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                E +FF L A++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 184 VMKDSEHFFFDLPAFEGMLKEWINSGS---LQQEMANKLGEWFEQGLQQWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L N        +FW  D      H IGKDI+ F
Sbjct: 241 FEIPDAPGKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEFWSKDSTAEVYHFIGKDIVYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+  
Sbjct: 301 HSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDNLDPEYLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +RVN+DL   + NL SR+   I K + G +        +D S
Sbjct: 361 AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFGGKLAK-----IADTS 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + +      + I    + +   +A+ ++++L    + Y     PW+L K     + A  V
Sbjct: 416 LTTSFLAKQEIIANFYETREYGKAMREIMALADIANAYVADSAPWQLIKEEDKQEEAHQV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + R L   L+  +PKLA  +   L +      + +LD  L  G  + K F  + 
Sbjct: 476 CSNALNLFRILVTYLKPVLPKLAQDVEAFLQME---LTWDNLDIDL-AGHEIAK-FKALM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|254251693|ref|ZP_04945011.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894302|gb|EAY68182.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 901

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 224/539 (41%), Gaps = 47/539 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 196 QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 255

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +++     +   D   +S+D+F  T  + +      ++  + + G I +
Sbjct: 256 AEKEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYTTDSEENRVLSEKIYVALKENGLIAE 315

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 316 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 375

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 376 PVRKTSTHYFFRLSD--PRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 433

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKD
Sbjct: 434 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWVRPGSSAEQYHFIGKD 493

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 494 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 553

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 554 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----S 609

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  ++      + +I  + + +   RAL   + L  EV+ Y D+ KPWEL K   N  
Sbjct: 610 AMNHPLVVKLRDAIPKIAAHYEAREYGRALRHTMELADEVNAYVDSAKPWELAKDPANAV 669

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                  V++E  R L++ L+  +P++A  +     +A     +    + L     +  
Sbjct: 670 ALHETCSVSLEAFRLLSLALKPVMPRVAASVEAFFGIAP--LAWADAAKPLSSAQPISA 726


>gi|66047113|ref|YP_236954.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500945|sp|Q4ZPK6|SYM_PSEU2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|63257820|gb|AAY38916.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Pseudomonas syringae pv. syringae
           B728a]
          Length = 682

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 223/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVEFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAELRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LT----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKTLLANHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|71906214|ref|YP_283801.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|123760643|sp|Q47IK0|SYM_DECAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71845835|gb|AAZ45331.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 696

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 220/537 (40%), Gaps = 46/537 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+ 
Sbjct: 3   RKILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMSGNECWYVCADDTHGTPIMLRAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +             + +D++  T      D    ++ K+   G I     
Sbjct: 63  EGITPEQLIARVHGEHSRDFAGFHVGFDNYYSTHSDETRDCANDIYLKLRAAGLIETRTI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y    + +  D  +             G + +   A + P    E            
Sbjct: 123 EQYYDPVKQLFLPDRFIKGECPKCGAKDQYGDNCESCGAAYAPTDLKEPYSAISGAKPEL 182

Query: 163 ---EGYFFRLSAYQDK-LLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTF 214
              E YFF+LS  + +  L  Y S    +L  E  N++  +     ++ L D  +SR   
Sbjct: 183 RTSEHYFFKLSDPRCEAFLRQYTSRDNGVLQNEAANKMQEWLGAPGENKLTDWDISRDAP 242

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IPD P    YVW+DA   Y+ +             +++  D      H IGKDIL
Sbjct: 243 YFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCARNGLDFNEYFKPDAKTELYHFIGKDIL 302

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRY 327
            FHA++WPA L  A    P K+F+HGF+   G K+SKS G  I     +   +  + LRY
Sbjct: 303 YFHALFWPAELAHAGFRTPTKIFAHGFLTVDGAKMSKSRGTFITAESFLKTGLNPEWLRY 362

Query: 328 FLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +  A  +D     D    RVN+DL     N+ SRS   I K ++G +    A   +
Sbjct: 363 YYAAKLSATMEDIDLSLDDFVARVNSDLVGKYVNIASRSAGFITKRFNGQLAPATAELPA 422

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RA 444
               +         I E  + +   +A+ ++++L    ++Y D+ KPWEL K        
Sbjct: 423 ----IKGIQEAASRIAELYEAREFGKAMREIMALTDAANQYVDSVKPWELAKQEGKEVEL 478

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                  + + R L +LL+  +P +A K+   L +A  +  +      L  G  ++ 
Sbjct: 479 HAACTNALNLFRLLTVLLKPILPIVAEKVEKFLNIAPLH--WADTQSLLAGGHAINA 533


>gi|262376740|ref|ZP_06069968.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308450|gb|EEY89585.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 686

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 138/542 (25%), Positives = 235/542 (43%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  D G+I     
Sbjct: 62  NGISPEAQIANVQKEHIRDFDGFGVHFDHYDSTHSDTNRARASEIYVKNRDAGNIAVRPV 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +   A +N               PV+
Sbjct: 122 TQLFDPEKGMFLSDRFIKGTCPKCKAEDQYGDSCEVCGATYNATELLNPHSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFGEYLQK--WTRDEGRLPVSIANKLDEWFENGLNDWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   +W  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPELNFDDYWKKDSENEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     +E +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   +D  + T  A  E  +S
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINTKFDNKLSTICAEPELVQS 418

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
            +   S     I +  + +    A+ ++++L  + ++Y D +KPW L K +        V
Sbjct: 419 FIDAGSS----IAQAYEAREFSAAIREIMALADKANQYIDEKKPWALAKQDGQEQQVHDV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLA+ L   +P LA ++ D L +  E+  F S +  L  G  +   F P+ 
Sbjct: 475 CSVGINLFRQLAVYLAPVLPTLAQQVQDFLQL--ESFDFASRETILV-GHEI-ALFQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|50083984|ref|YP_045494.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|68565979|sp|Q6FE36|SYM_ACIAD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49529960|emb|CAG67672.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 685

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 230/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 62  NGISPEKQIANVQQEHIRDFDGFGVHFDHYDSTHSAENKVRSEDIYLKNREAGNIAVRPI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +    + + +D            E   G   +     +N               PV+
Sbjct: 122 TQLFDPEKQMFLSDRFIKGTCPKCKAEDQYGDACEVCGTTYNATELLNPRSTLSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L     +  E  LP+   N++  + ++GL D  +SR    +G 
Sbjct: 182 K-SSDHYFFKLPNFGEYLQK--WTRDEGRLPVSIANKLDEWFEAGLADWDISRDAPYFGF 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            +   +W  D      H IGKDI+ F
Sbjct: 239 EIPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPELNFDDYWKKDSQNEVYHFIGKDIVYF 298

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 299 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 358

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I   ++  +    A  E    
Sbjct: 359 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSANCAEPE---- 414

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TV 447
           ++         I +  + +    A+ ++++L  + ++Y D +KPW L K          V
Sbjct: 415 LVQSFIDAGDSIAQAYEAREFSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVHNV 474

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLAI L   +P LA ++   L +  E+  F S  Q L     + + F P+ 
Sbjct: 475 CSVGINLFRQLAIYLSPVLPTLAAQVQAFLQL--ESFDFASRQQILLA-HEIAQ-FQPLM 530

Query: 508 PR 509
            R
Sbjct: 531 QR 532


>gi|325266408|ref|ZP_08133085.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981851|gb|EGC17486.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 684

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 127/546 (23%), Positives = 229/546 (41%), Gaps = 46/546 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I  AA
Sbjct: 2   TQRKILVTSALPYANGSIHLGHMVEHIQTDIWVRFQKLRGHECYYCCADDTHGTPIMLAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  +++             I YD++  T    +      ++  +   G I   
Sbjct: 62  EKQGITPEEMIEKTHAEHLADFTGFGIGYDNYYSTHSPENKKFSEQIYLALKANGKIVGK 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE--------- 162
             +  +    + +  D  V             G + +     ++P + +           
Sbjct: 122 TINQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGATP 181

Query: 163 -----EGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTF 214
                E +FF+LS   D L  +   E++    L  E  N++  ++K G L D  +SR   
Sbjct: 182 VMKQTEHFFFKLSDCADYLKQWTAGETNGRAHLQPEALNKMNEWLKDGELSDWDISRDAP 241

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IPD+P    YVW+DA   Y+ +   L +  G     +          H IGKDIL
Sbjct: 242 YFGFQIPDEPDKYFYVWLDAPVGYMASFQNLCDKIGLDFNEFFGKDSTAEMYHFIGKDIL 301

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FHA++W A L  +    P  +F+HGF+   G+K+SKS G  I     +E+ +  + +RY
Sbjct: 302 YFHALFWTAMLEYSGHRAPTGIFAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEWMRY 361

Query: 328 FLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++  +  +  +D   +      RVN+DL     N+ SR+   I K + G +         
Sbjct: 362 YIAAKLNSKIEDIDLNLQDFIARVNSDLVGKYINIASRASGFIHKKFAGSLHAVSGS--- 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
             ++++  +     I  + +N+   +AL ++++L   V+ Y DA KPWEL K      R 
Sbjct: 419 --ALIARLTEKSDSIAADYENREYAKALREIMALADIVNEYVDANKPWELAKQEGMEARL 476

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V    +   + L   L   +P +A +  + L +      +      L    ++H+ + 
Sbjct: 477 HEVCSELINAFKILTAYLAPVLPNVAAQAAEFLNMP--QLDWSHTASTLPANHVIHQ-YQ 533

Query: 505 PIFPRF 510
            +  R 
Sbjct: 534 HLMQRI 539


>gi|74316878|ref|YP_314618.1| methionyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123759136|sp|Q3SKG8|SYM_THIDA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|74056373|gb|AAZ96813.1| methionyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 690

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 124/511 (24%), Positives = 218/511 (42%), Gaps = 42/511 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+ 
Sbjct: 3   RQILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGTNCRYMCADDTHGTAIMLRAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +T +  + +             I +D +  T    + +    ++  + D G I     
Sbjct: 63  EAITPEALIQRVWAEHTRDFAGFHIGFDHYYSTHSDENREHASKIYLALKDAGLIEVKTI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           +  Y      +  D  +             G + +   A ++P +               
Sbjct: 123 AQLYDPVKNLFLPDRFIKGECPKCGAADQYGDNCEVCGATYSPTELKNPVSAVSGATPVH 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E YFF+L   +  L  +  S     L  E  N++  +  +GL +  +SR    +G +
Sbjct: 183 KDSEHYFFKLGDCEAFLREWTTSGT---LQAEAANKMQEWFAAGLNNWDISRDAPYFGFE 239

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   Y  +       +W  D     +H IGKDIL FHA+
Sbjct: 240 IPDAPGKYFYVWLDAPVGYMASFARYAKDHGLDFDAWWGKDSKTELVHFIGKDILYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332
           +WPA L  +   LP  V++HGF+   G+K+SKS G  I     +++ +  + LRY+   +
Sbjct: 300 FWPAMLKFSGHRLPTAVYAHGFLTVNGQKMSKSRGTFITASSYLDQGLNPEWLRYYYAAK 359

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D   + D    RVN+DL     N+ SR+   I K +DG +       E    ++
Sbjct: 360 LNGTMEDIDLNLDDFVARVNSDLVGKFINIASRTAGFIHKKFDGKLADGVGNIE----LI 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
                    I  + + +   +AL ++++L    ++Y   +KPWEL K +    R   V  
Sbjct: 416 GEFQAAADTIAAHYEARDYAKALREIMALADRANQYVADEKPWELAKDDAAVYRLHEVCT 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V + + R L + L+  +PKLA ++   L + 
Sbjct: 476 VALNLFRLLTLYLKPVLPKLAGEVERFLDIP 506


>gi|327403508|ref|YP_004344346.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319016|gb|AEA43508.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 685

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 136/552 (24%), Positives = 238/552 (43%), Gaps = 47/552 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K  ++ A+ Y N   H+GH A   + AD+  RF R +G DV F  G+DEHG  I   
Sbjct: 2   NKSKFTVTAALPYANGPLHLGHVAGVYLPADIFVRFLRSNGHDVAFICGSDEHGAAITLR 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  VD+ ++   D      IS+D F RT+ + H +T +  +K + +KG   +
Sbjct: 62  AKKEGITPREIVDKYNQIIGDSFKQFGISFDIFHRTSAQIHIETAQDFFKVLEEKGKFIE 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEEEG 164
                +Y    + +  D  +             G                NPV  +  + 
Sbjct: 122 ETTEQYYDEEYQQFLADRYITGECPNCQNPNAYGDQCEKCGSALSPTDLKNPVSTLSGKS 181

Query: 165 YFFRLSAYQD------------KLLSYYESHPEFILPIERRNE----VISFVKSGLKDLS 208
              R +++               +        +   P   RN+     +S++  GL   +
Sbjct: 182 PVLRSTSHWFLPMDRHEEWLRPWIKEGILDGKQQHDPKAWRNQVIGQCMSWIDCGLHPRA 241

Query: 209 LSRKTFDWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LH 261
           ++R   DWG+ +P       ++YVW+DA   Y++ T      +G   K +  +     +H
Sbjct: 242 MTRD-LDWGVPVPLPGADGKVLYVWLDAPIGYISATKQWALDNGKDWKDYWCNEDRKLVH 300

Query: 262 VIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            IGKD + FHAI +P          LP  V ++ F+  +G+K S S    +   E +E  
Sbjct: 301 FIGKDNIVFHAIIFPILLKDHGGFILPDNVPAYEFLNLEGDKFSTSRNWAVWLHEYLERY 360

Query: 321 G--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              +D L+Y L       KD  +     + RVN +LA+ +GN ++R++ +  K Y+G +P
Sbjct: 361 PEKIDELKYTLTCIAPETKDAEFTWKEYQARVNNELADILGNFINRALVLTQKYYEGKVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G  T  D+ +L     +   I E +    +  A A+ + L    ++Y    +PW+L K
Sbjct: 421 ACGELTAEDKQVLVDMKAIPARIAELVYQYKLRDAQAEAMMLARIGNKYLADNEPWKLVK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           T+P R  T++ + +++   L ++L  F+P+ A KI    FV  E + +      L     
Sbjct: 481 TDPKRVETIMNIALQITANLGLVLDPFLPETAAKIRA--FVGTEVQTWDKSGTILLQAGD 538

Query: 499 LHKTFDPIFPRF 510
              T   +F + 
Sbjct: 539 QTSTPTILFQKI 550


>gi|300175086|emb|CBK20397.2| unnamed protein product [Blastocystis hominis]
          Length = 749

 Score =  330 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 115/550 (20%), Positives = 232/550 (42%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  ++ + I++A+ Y N  PH+G+    ++ ADV AR+ R  GL+ L+  GTDE+G    
Sbjct: 187 VAGKQNILITSALPYVNNVPHLGNLIGCVLSADVFARYCRERGLNTLYVCGTDEYGTATE 246

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD---TCRILWKKISDK 116
             AQ   +T +   ++     R + D  DI +D F RT+ +         + ++K++ ++
Sbjct: 247 TRAQADHMTPREICNKFHAIHRAVYDWFDIHFDFFGRTSTEDPRKDTQIAQGIFKRLCEE 306

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFR 168
             + +      Y  +   +  D  +             G   +   N +   E      +
Sbjct: 307 DQLVEQEIEQVYCHQCGRFLADRFIEGTCPICGYPKAGGDQCDKCGNLLNATELVNPVCK 366

Query: 169 LSAYQDKLLSYYESHPEFILPI--------------------ERRNEVISFVKSGLKDLS 208
           +     K+ +    H    LP                        N    ++++GLK   
Sbjct: 367 VGGPTHKVENRVTKHLFLNLPKLEPELRAWVAETSVANDWSSNAINITNGWIENGLKPRC 426

Query: 209 LSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVI 263
           ++R    WG  +P +     + YVW DA   Y++ T           +  P D+     +
Sbjct: 427 ITRD-LKWGTPVPREGYEDKVFYVWFDAPIGYISITANYTKEWKQWWQN-PKDVKLVQFM 484

Query: 264 GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EV 320
           GKD + FH + +P+ L+    P  K  ++    ++ ++  K SKS G  +   +  +  V
Sbjct: 485 GKDNIPFHTVIFPSTLIGTRDPWTKVTQISCTEYLNYEDGKFSKSQGTGVFGDQAKDTNV 544

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             +  R++L+       D  +  + L ++ N +L   +GN V R +S +    D  +P  
Sbjct: 545 PSEVWRFYLLSNRPEQSDSAFYWEDLAEKNNNELLKNLGNFVHRCLSFVYNRMDATVPPC 604

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           GA TE ++ ++   +  LQ+  E M    +   L   + +    ++Y    +PW + K++
Sbjct: 605 GAKTEREQKLIEAVNETLQKYNEAMMGTHLKAGLKWAMEISRLGNQYLQDAEPWTVLKSD 664

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P++  T+ YV V ++  ++ + + F+P  ++K+   L   D  +     ++ +  G  ++
Sbjct: 665 PEQCGTICYVAVNLVYLISNVFEPFMPGFSDKVCYQLNF-DHGKIPDVFEEVIPAGHKIN 723

Query: 501 KTFDPIFPRF 510
           K   PIF + 
Sbjct: 724 KIL-PIFKKI 732


>gi|294649485|ref|ZP_06726908.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824613|gb|EFF83393.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 717

 Score =  330 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 229/542 (42%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 34  RKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +    +      D   + +D +  T    +      ++ K  + G+I     
Sbjct: 94  NGISPEAQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARASEIYIKNREAGNIAVRPV 153

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHN---------------PVQ 158
           +  +      + +D            E   G   +     +N               PV+
Sbjct: 154 TQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPRSTLSGATPVE 213

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + YFF+L  + + L  +        LP+   N++  + ++GL D  +SR    +G 
Sbjct: 214 K-SSDHYFFKLPNFSEYLQKWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGF 270

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRF 270
           +IPD P    YVW+DA   Y+++            S   FW  D      H IGKDI+ F
Sbjct: 271 EIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLSFDDFWKKDSDKEVYHFIGKDIVYF 330

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L  AN   P  +F +GF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 331 HALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFA 390

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++   +D   + D   ++VN+DL   + N+ SR    I  +++  + +  A  E    
Sbjct: 391 SKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSNFNNTLSSTCAEPE---- 446

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I +  + +    A+ ++++L  + ++Y D +KPW L K          V
Sbjct: 447 LVQSFIDAGDSIAQAYEAREFSAAIREIMALADKANQYIDEKKPWALAKQEGQEQQVHDV 506

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V + + RQLAI L   +P LA ++   L +  E+  F S    L     + + F P+ 
Sbjct: 507 CSVGINLFRQLAIYLAPVLPTLATQVQAFLQL--ESFDFASRQHILVA-HEIAQ-FQPLM 562

Query: 508 PR 509
            R
Sbjct: 563 QR 564


>gi|300778746|ref|ZP_07088604.1| methionine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504256|gb|EFK35396.1| methionine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 679

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 136/544 (25%), Positives = 241/544 (44%), Gaps = 44/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  R+   I+ A+ Y N   HIGH A   I ADV ARF R  G DV F  G+DEHG  I 
Sbjct: 1   MSNRK--MITAALPYANGPVHIGHLAGVYIPADVYARFQRRLGKDVAFICGSDEHGIPIT 58

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +     L IS+D++ RTT K+H++T +  +K + +KG  
Sbjct: 59  IRAKKEGVTPQDIVDKYHGIIKKSFSDLGISFDEYSRTTSKKHYETSQDFFKVLYEKGKF 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +     ++  +   +  D  +             G   +      +P + +        
Sbjct: 119 TEEVSEQYFDEQAGEFLADRYIVGTCPNCGNENAYGDQCEKCGTTLSPSELINPKSMLSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L+ Y+D L  +     +         +V S++  GLK  +++R   
Sbjct: 179 NVPILKETKNWYLPLNEYEDFLNQWIIEGHKDDWKPNVYGQVKSWLNDGLKPRAMTRD-L 237

Query: 215 DWGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           +WG+ +  P+    ++YVW DA   Y++ T      +G   K +        +H IGKD 
Sbjct: 238 NWGVPVPLPNAEGKVLYVWFDAPIGYISFTKEWAEKNGKDWKDYWQSEDSDLVHFIGKDN 297

Query: 268 LRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+ +    +  +P  V +  F+  + +KIS S    +   E +E+     D 
Sbjct: 298 IVFHCIIFPSMMKAHGDYIMPANVPAFEFLNLENDKISTSRNWAVWAHEYVEDFPGQQDV 357

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L+      KD  +     + + N++LAN  GN ++R   +I K+++G +P      
Sbjct: 358 LRYVLLSSAPETKDNNFTWKDFQTKNNSELANIFGNFINRVAVLINKNFEGKVPKGDVNA 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
              E I         EIR  ++N     AL   ++L    ++Y   ++PW+  K + ++ 
Sbjct: 418 PELEEIGKRAV----EIRNFLENYEFRNALTAFMNLARFGNQYLQNEEPWKTVKNDLEKT 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-FQSLDQRLKPGFMLHKTF 503
              L++  ++   LA L + F+P  A K+++I  V  +     +S    ++ G  +    
Sbjct: 474 KNTLFIGAQISVALANLAEPFLPFTAQKLYEIFNVEQKGWTEIESSKVLIEAGHPIMANA 533

Query: 504 DPIF 507
             +F
Sbjct: 534 PILF 537


>gi|255020628|ref|ZP_05292690.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969864|gb|EET27364.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 680

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 134/537 (24%), Positives = 223/537 (41%), Gaps = 42/537 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E    D+  R+H+L G D ++    D HG  I   AQ
Sbjct: 2   KRKILVTSALPYANGPLHLGHLVEYTQTDIWVRYHKLRGHDCVYVCADDAHGTPIMLRAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G++ +  V++  +          I +D +  T    +    + +++++     I    
Sbjct: 62  SEGISPETLVERMQKEHLRDFTAFGIGFDCYHSTHSPENFTISQDIYRRLRAAEHIVVRE 121

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWME----------- 161
               +      +  D  +             G + +   A ++P   ++           
Sbjct: 122 IEQAFDPVAGIFLPDRFIRGTCPKCGAADQYGDNCEVCGATYSPTDLVDAVSAVSGATPV 181

Query: 162 ---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E YFF LS + D L  +  S     L  E  N++  + K+GL D  +SR    +GI
Sbjct: 182 RRPTEHYFFTLSDFADFLQEWIHSGT---LQEEMANKLDEWFKAGLADWDISRDAPYFGI 238

Query: 219 KIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
            IPD      YVW+DAL  Y+  TT + +        +W A       H IGKDI+ FHA
Sbjct: 239 PIPDTEGKFFYVWLDALPGYMAATTHWCEEHGRDFDTYWGAQAQSEVYHFIGKDIIYFHA 298

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A   LP  +F+HGF+   G K+SKS G  I     +E +  + LRY+   +
Sbjct: 299 LFWPAMLKGAGYRLPTAIFTHGFMTVNGAKMSKSRGTSITAARYLERLEPEFLRYYFASK 358

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D   + +    + N DL   + NL +RS   I + + G    P      D +  
Sbjct: 359 LNPRPEDIDLNLEDFLLKGNGDLVGKVVNLAARSAGFIHQ-FGGGRLAPSLG--EDATFY 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLY 449
           +  +   + I      +   RA+  ++++   V+ Y D   PW+L K    R     V  
Sbjct: 416 AELAGQRERIGAAYAERDYARAIRDIMAMADRVNAYVDRHAPWQLAKDPAQREVLLRVAT 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHKTFD 504
            T+   R L  LL   VP+LA +  D L    +        LD  + P   L +  +
Sbjct: 476 TTLNAFRLLITLLSPVVPQLARRSLDFLHCPLDWDSLAEPLLDHHIAPYQHLLQRME 532


>gi|330949991|gb|EGH50251.1| methionyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 682

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 222/542 (40%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAALRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   +    + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWAD-HKTLLANHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|71065987|ref|YP_264714.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123748115|sp|Q4FRS8|SYM_PSYA2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71038972|gb|AAZ19280.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 700

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 137/555 (24%), Positives = 237/555 (42%), Gaps = 56/555 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK RE + +++A+ Y N   H+GH  E I  D+  R  +  G  V +    D HG  I  
Sbjct: 1   MKVRE-ILVTSALPYANGDIHLGHLVEYIQTDIWVRSMKAQGHKVTYVCADDAHGTAIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ GVT +  +               I++D++  T  + + +   ++++++ D G I 
Sbjct: 60  KAEDNGVTPEQQIANVQAAHEADFAKFLINFDNYHSTHSEENREFSELIYRRLRDTGHIS 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                  +    + +  D  V             G + +     ++  +  +        
Sbjct: 120 TRDVEQLFDPEKQLFLADRFVKGTCPECAAPDQYGDNCEVCGTTYDATELKDPYSTLSNA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + YFF L  ++  L     +  +  L +   N++  +  +GL    +SR    
Sbjct: 180 TPILKTSKHYFFDLPEFEQFLKD--WTRSDNRLQVSVANKLQEWFDAGLTSWDISRDAPY 237

Query: 216 WGIKIPDD----PQYIMYVWIDALTNYLTTTGYLD-------------NPDGSKAKFWPA 258
           +G +IPD     P    YVW+DA   Y+ +   L              +    + +    
Sbjct: 238 FGFQIPDTPSDEPDKYFYVWLDAPVGYMASFKNLCDKRAGTDDALDFDHYWAQENEHKTE 297

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FHA++WPA L  + L  P  VF+HGF++  GEK+SKS G  I      E
Sbjct: 298 VYHFIGKDIVYFHALFWPAMLAGSELRTPTAVFAHGFLMVNGEKMSKSRGTFIKADTYAE 357

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   +LK YDGM+
Sbjct: 358 HLHPEYLRYYFASKLSDKVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFLLKKYDGML 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A      S+L   ++   EI    +N+   RA+  ++    + + Y D +KPW L 
Sbjct: 418 TDVCAEP----SLLEDITKTGDEIAAAYENREFSRAMRLIMQCADKANEYIDEKKPWALA 473

Query: 438 KTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K          V  V + + RQL + L   +P+L     + L + D    F S ++ L  
Sbjct: 474 KVEGAEQEVQDVCSVAINIFRQLMVYLAPVLPELTANAKEFLNIND--LSFASRNEWLL- 530

Query: 496 GFMLHKTFDPIFPRF 510
           G  ++K F P+  R 
Sbjct: 531 GHQINK-FKPLMQRI 544


>gi|71281104|ref|YP_269544.1| methionyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123733733|sp|Q480H5|SYM_COLP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71146844|gb|AAZ27317.1| methionyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 713

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 137/544 (25%), Positives = 234/544 (43%), Gaps = 47/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E+ K+ ++ A+ Y N   H+GH  E I  D+  RF R+ G +  F    D HG  I  
Sbjct: 18  LAEKRKILVTCALPYANGSIHLGHMLEHIQTDIWVRFQRMRGHETYFVCADDAHGTPIML 77

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +  ++              IS+D++  T    + +    ++  +  KG I 
Sbjct: 78  KAQELGITPEEMINGVREERIKEFSDFHISFDNYHTTHSDENKEYSEKIYNALHAKGHIK 137

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ----------- 158
               S  Y      +  D            E   G       A ++P +           
Sbjct: 138 TRIISQLYDPEKGMFLADRFVKGTCPKCKSEDENGDSCDNCGATYSPTEVLNPRSAISGA 197

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E YFF L A++  L  +  S     L  E  N++  + + GLK   +SR    
Sbjct: 198 TPILKDSEHYFFDLPAFETMLSDWIRSGA---LQEEVANKLTEWFEQGLKQWDISRDAPY 254

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDIL 268
           +G +IP+ P    YVW+DA   Y+ +   L + D       FW  +      H IGKDI+
Sbjct: 255 FGFEIPNAPGKFFYVWLDAPIGYMGSFKNLCDKDSTIDFDSFWNKNSDAELYHFIGKDII 314

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  A+   P  VF+HGF+   GEK+SKS G  I     ++ +  + LRY+
Sbjct: 315 NFHSLFWPAMLEGADFRKPTAVFAHGFVTVNGEKMSKSKGTFIKGRTYLDHLNPEYLRYY 374

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   +RVN+DL   + N+ SR  S I K +DGM+ T       D
Sbjct: 375 YATKLTHKIDDLDLNLEDFVQRVNSDLVGKVVNIASRCASFITKRFDGMLST----NIDD 430

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
           +++          I  + +++   R + ++++L  +V+ Y   ++PW+L K  T      
Sbjct: 431 QALADEVMAAGDSIAAHYESRDFGRGMREIMALADKVNEYIAIKEPWQLVKDETKQQEVQ 490

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + + + R L I L+  +P LA+     L    +   ++   + L     ++K F  
Sbjct: 491 DICSLGINMFRTLMIYLKPVLPVLADSTAAFLN---DELVWEG-HKTLLTDHKINK-FKA 545

Query: 506 IFPR 509
           +  R
Sbjct: 546 LLQR 549


>gi|330898584|gb|EGH30003.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 682

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 224/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKRWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGRQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLHV--EPLTWED-HKILLTNHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|17547100|ref|NP_520502.1| methionyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|25009371|sp|Q8XWT9|SYM_RALSO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|17429401|emb|CAD16088.1| probable methionyl-trna synthetase (methionine--trna ligase)(metrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 688

 Score =  329 bits (844), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 131/531 (24%), Positives = 216/531 (40%), Gaps = 46/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G +  +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C  ++ K+ + G I 
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLKEAGLID 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 120 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 180 TPVRKSSEHYFFKLSDPRCETFLRDWVG-DLAQPEATNKMREWLGDEGESTLSDWDISRD 238

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 239 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKD 298

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 299 ILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 358

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 359 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALAN 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 419 P----LMVQLREAAPQIADLYEKREYSKALRTVMELADAVNAYVDTEKPWDLAKDEAQRD 474

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +      V +E  R LA+ L+  +P    +I   L +  E   ++++D +L
Sbjct: 475 KLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNI--EPLNWRAIDAQL 523


>gi|124802884|ref|XP_001347624.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23495207|gb|AAN35537.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 889

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 189/510 (37%), Positives = 299/510 (58%), Gaps = 11/510 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  YI+TAI Y N  PHIGHAYE+++AD +AR+H++ G D  FTTG DEHG KIA  A
Sbjct: 221 KNETFYITTAINYVNGDPHIGHAYEIVLADAIARYHKIIGRDTFFTTGADEHGLKIANQA 280

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T K   D+N   F+++  +L +  D ++RTT   H    + +W K    GDIY G
Sbjct: 281 AKNNMTPKELCDKNVLKFQNLNKLLYVEDDYYVRTTRDSHKKIAQEVWDKCEKNGDIYLG 340

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY++R+E Y  ++E             +  ++ M+E  YFF++S YQDKL+ Y +S
Sbjct: 341 EYEGWYNVREETYVPENEAKLMN--YIDPLNNIKLEKMKEPSYFFKMSKYQDKLIEYIQS 398

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +P++I P ++RNE++  +K  L DLS SR  F WGI++P+DP+++MYVW+DAL NY ++ 
Sbjct: 399 NPDYIQPEQKRNEILQRLKEPLADLSCSRTKFTWGIQVPNDPKHVMYVWMDALINYYSSC 458

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGE 301
              +     K K+WPA++H+IGKDI  FH + +P  LLSAN+PL K VFSHGF+L   G+
Sbjct: 459 FIDEG----KKKYWPANVHIIGKDITWFHTVIFPTILLSANIPLSKSVFSHGFVLAADGK 514

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P+E+I++ G DA RY +++E   G D  +D D L    N+DLA+ IGNL
Sbjct: 515 KMSKSLGNVINPLEIIDKYGADAFRYHVIKETKRGCDTRFDVDNLVDMCNSDLADTIGNL 574

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R++S+     +  IP      E    I       +  +  +M+   + +   + + + 
Sbjct: 575 VQRTLSLCQLCNESKIPAFYPEYEIHLPI--DILHFINRVEYHMKTFCVQKCCEKSVQVC 632

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +++++     PW+ K    ++   ++ + +E I  +A  L  F+P L++KIF+ L    
Sbjct: 633 KDLNKFLTDMAPWKYKDDLKNKKLHIIRIMLEAIYFIAHYLDIFIPSLSHKIFEKLNTPK 692

Query: 482 E-NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +           L  G +++   + +F ++
Sbjct: 693 KVIADLSPWLNNLTEGVIINN-DNILFKKY 721


>gi|115352535|ref|YP_774374.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322486|sp|Q0BCT3|SYM_BURCM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115282523|gb|ABI88040.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 720

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 136/547 (24%), Positives = 227/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G + +   + + P + +          
Sbjct: 135 RAIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     +  I  + + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLRDAIASIAAHYEGREYSRALRHTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ----SLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     VA           S  Q +K    
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVAPLAWADAAKPLSSAQPIKAYQH 548

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 549 LMTRVDP 555


>gi|330966553|gb|EGH66813.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 682

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 127/542 (23%), Positives = 226/542 (41%), Gaps = 41/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D              + +D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D  +             G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAVDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  + +  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFNTMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A+L  P  V  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGADLRKPTGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D      
Sbjct: 421 LA----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAAC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKTFD 504
            + V + RQL I L+  +P LA      L VA    D+++   +   +L P   L    D
Sbjct: 477 ALGVNLFRQLVIFLKPVLPNLAADAEKFLNVAPLTWDDHKTLLT-HHQLNPFSALMTRID 535

Query: 505 PI 506
           P+
Sbjct: 536 PL 537


>gi|281424592|ref|ZP_06255505.1| methionine--tRNA ligase [Prevotella oris F0302]
 gi|281401263|gb|EFB32094.1| methionine--tRNA ligase [Prevotella oris F0302]
          Length = 687

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 129/543 (23%), Positives = 244/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+     +   +   IS+D + RTT K H       +KK+ D+G
Sbjct: 61  ITLRAKKEGITPQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKIHSKLASDFFKKLYDEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLIEKESEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTI 180

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ  L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSKPVVRKTKNWYLPLNDYQGWLKKWILDEHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + +  K    + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGSWEKWWKDPDTRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P      ++  LP  V ++ F+  + +KIS S    +   E ++E+ 
Sbjct: 299 IGKDNIVFHCIIFPTMLKAHSDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLQELP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D + L+    V +++   +       A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELQDVDRAALNEFKDVKEKVEAYLDVFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LK G  L
Sbjct: 479 DPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWSELGNTNLLKAGHQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|195120732|ref|XP_002004875.1| GI20156 [Drosophila mojavensis]
 gi|193909943|gb|EDW08810.1| GI20156 [Drosophila mojavensis]
          Length = 1032

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 122/549 (22%), Positives = 226/549 (41%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRAAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT     +  +  +K + + G I    
Sbjct: 314 AENMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTPEQTEIVQEAFKDVYEAGYILTES 373

Query: 124 YSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEGYFFRLS--- 170
                  + + +  D  V          Y+ A G   +     V   E      ++    
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNTA 433

Query: 171 -------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                           +  L  +    E       R    ++++ GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFLDLPKAEPKLREWVDRAEQGWTHNARVITRAWLREGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFH 271
           I +P     Q + YVW DA   Y++ T           +  P         + KD + FH
Sbjct: 493 IPVPHKNFEQKVFYVWFDAPFGYVSITKRYTKDYLQWWQPAPGTDVELFQFMAKDNVPFH 552

Query: 272 AIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           ++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R++
Sbjct: 553 SVVWPSVLLAINKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWRFY 612

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L      G+D  +    L  R N++L N +GN V+R++S   +++D  +P       +D 
Sbjct: 613 LASARPEGQDSSFSWTDLAARNNSELLNNLGNFVNRALSFCERNFDSKLPQID-LNHNDF 671

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RAS 445
            +L++ +R L+    +++   +   +  ++S+    + Y   Q+PW L K + D   RA 
Sbjct: 672 LLLALINRELRGYINSLEKAKMRDGIRHLLSISRHGNGYIQYQQPWALLKGSDDQKTRAG 731

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHK 501
           T++ +++ ++  LA LL  F+P  A  +F  L       D N+ F +L   L+PG  +  
Sbjct: 732 TIIGLSINIVCLLANLLFPFMPTTARAMFAQLNTKQTPLDANKPFATL--LLRPGHKIG- 788

Query: 502 TFDPIFPRF 510
           T  P+F + 
Sbjct: 789 TPSPLFNKL 797


>gi|78067237|ref|YP_370006.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728935|sp|Q39DV4|SYM_BURS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77967982|gb|ABB09362.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 720

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 134/547 (24%), Positives = 229/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 15  QGDRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T    +      ++  + D G I +
Sbjct: 75  AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALQDAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G + +   + + P + +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSKHYFFRLSD--PRCETFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRNGVDFDAWVRPGSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N  
Sbjct: 429 AMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ----SLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     +A           S +Q +K    
Sbjct: 489 ALHETCSVSLESFRLLSLALKPVMPRVAEAVESFFGIAPLAWSDAAKPLSSEQPIKAYQH 548

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 549 LMTRVDP 555


>gi|207742639|ref|YP_002259031.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206594033|emb|CAQ60960.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 688

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 132/531 (24%), Positives = 217/531 (40%), Gaps = 46/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C  ++ K+ + G I 
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLKEAGLID 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 120 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 180 TPVRKSSEHYFFKLSDPRCETFLREWVA-DLAQPEATNKMREWLGDEGESTLSDWDISRD 238

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 239 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKD 298

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 299 ILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 358

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 359 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALGN 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 419 P----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQRD 474

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +      V +E  R LA+ L+  +P    +I   L V  E   ++++D +L
Sbjct: 475 KLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNV--EPLNWRAIDAQL 523


>gi|307545318|ref|YP_003897797.1| methionyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217342|emb|CBV42612.1| methionyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 678

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 225/539 (41%), Gaps = 45/539 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF +  G D  +    D HG  I   A+ 
Sbjct: 7   RKILVTSALPYANGAIHLGHLLEYIQTDIWVRFQKSRGHDCHYVCADDAHGTAIMLRAEQ 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T++  +D+ SR  +       + +D++  T  + +     +++ ++ +KG I     
Sbjct: 67  EGITSEALIDRVSREHQADFARFGVGFDNYHSTHSEENRYFSELIYTRLREKGHIATRDI 126

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE----------- 162
              Y      +  D            E   G + +   A + P + ++            
Sbjct: 127 EQMYDPAKGLFLADRFIKGTCPKCRTEDQYGDNCEACGATYTPAELIDPVSAISGATPEV 186

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+L  + D +  +        +  + RN+++ + +SG  +  +SR    +G +
Sbjct: 187 RSSTHYFFKLPDFADFMHEWINDG---HVQPQIRNKLLEWFESGFNEWDISRDAPYFGFE 243

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   YL +     D        +W +D      H IGKDI+ FHA+
Sbjct: 244 IPDAPGKYFYVWLDAPIGYLASFKNLCDREGIDFDAYWNSDSEAEVYHFIGKDIVYFHAL 303

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A +  P  V  HGF+   G K+SKS G  I      E +  + LRY+   ++
Sbjct: 304 FWPAMLHGAGMRTPTAVNCHGFVTVNGAKMSKSRGTFIKAATYAEHLNPEYLRYYFAAKL 363

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   +RVN+DL   + N+ SR    I K   G +    A  +     L+
Sbjct: 364 TAGVDDLDLNLEDFAQRVNSDLVGKVVNIASRCAGFIKKLGGGKLSAHCAEPQR----LA 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYV 450
                  EI E+ + +   RA+ +++ L  E + Y    +PW L K          +  V
Sbjct: 420 RFIAAGDEIAEHYEAREFGRAMRRIMELADEANTYIAEAEPWVLAKQEGREQEVLDICSV 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + + RQL + L   VP +A      + +  E   + S    L     + K F P+  R
Sbjct: 480 GINLFRQLMVYLAPVVPSMAEDARQFMKL--ETLDWDSRQDLLL-DHEIAK-FKPLMTR 534


>gi|119476462|ref|ZP_01616813.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450326|gb|EAW31561.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 680

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 134/542 (24%), Positives = 231/542 (42%), Gaps = 50/542 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  R+ R  G D ++    D HG  I   A+ 
Sbjct: 11  RKILVTSALPYANGPLHLGHLLETIQTDIWVRYQRQKGNDCIYVCADDAHGTAIMLTAEK 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +           D   I +D++  T    +      ++ K+   G I     
Sbjct: 71  NGISPEQQIANIQAAHEKDFDQFLIRFDNYHSTHSAENKRYSEEIYLKLKANGHIASREI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE---------- 163
              Y    + +  D            E   G + +   A ++P   ++ +          
Sbjct: 131 MQLYDPEKDLFLADRYIKGTCPKCKTEDQYGDNCEACGATYSPADLIDPKSAVSGATPIE 190

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF L  ++  L  +        L  E  N++  ++++GL+D  +SR +  +G +
Sbjct: 191 KVSTHYFFTLPDFEQFLRDWTTGDS---LQKEISNKLGEWLEAGLQDWDISRDSPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   Y D    +   +W AD      H IGKDI+ FH +
Sbjct: 248 IPDAPGKYFYVWLDAPIGYMASFQNYCDRSGLNFDDYWGADSEAELYHFIGKDIINFHGL 307

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE- 332
           +WPA L SA    P  +F+HGFI   G+K+SKS G  I     +E +  + LRY+   + 
Sbjct: 308 FWPAMLHSAGYRKPNAIFAHGFITVNGKKMSKSRGTFIMASTYLEHLDPEYLRYYYAAKL 367

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A   D   + +   +RVN+DL   + N+ SRS   I K  DG++      T ++  +  
Sbjct: 368 SASIDDIDLNLEDFVQRVNSDLVGKVVNIASRSAKFITKGRDGVMSP----TLANAELWQ 423

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL--YV 450
                 +EI E  + +   +A+ ++++L    + YFD Q+PW+L K        V    +
Sbjct: 424 QAVIKGEEISELYEQREYSKAIREIMALADTTNEYFDGQEPWKLAKEAGKEQLVVDVASL 483

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP--GFMLHKTFDPIFP 508
            + + R + I L+  +P  A K    L          + ++ L P     ++  F  +  
Sbjct: 484 CINLFRLIMIYLRPVLPITAEKASSFLNAD------LNWNKELTPLLNHQIN-PFQALMT 536

Query: 509 RF 510
           R 
Sbjct: 537 RI 538


>gi|17540794|ref|NP_502196.1| Methionyl tRNA Synthetase family member (mrs-1) [Caenorhabditis
           elegans]
 gi|3915072|sp|Q20970|SYMC_CAEEL RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3877884|emb|CAA97803.1| C. elegans protein F58B3.5a, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 917

 Score =  329 bits (843), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 114/548 (20%), Positives = 219/548 (39%), Gaps = 43/548 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      
Sbjct: 33  GKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETK 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G T +   D+     + + +   I +  F RTT     + C+ ++ K+   G    
Sbjct: 93  ALQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSS 152

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                 Y  + E +  D  V            +G          N V   + + +  + +
Sbjct: 153 QSVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKAT 212

Query: 171 A-----------------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                                + L    +  +            +++K GL    ++R  
Sbjct: 213 PEVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRCITRD- 271

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P D   + + YVW DA   YL+ T  +   + +K    P ++   + +GKD +
Sbjct: 272 LKWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFVGKDNV 331

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FHA+ +P   L A  N  +   + +  ++ ++  K SKS G  I        E+  D  
Sbjct: 332 AFHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTEIPADIW 391

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G++P     T 
Sbjct: 392 RFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMN-LTN 450

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            D  +LS       +  +      +  A+  ++++    ++Y  AQ PW L K + +   
Sbjct: 451 DDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPWVLMKKDEEGKK 510

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           RA T++ V   +   +++LL   +P ++  I +   +             LK G  + + 
Sbjct: 511 RAGTIIGVAANIAYHVSVLLYPIMPTISATIREQCGLPALPLFTPFPICYLKAGHKIGQP 570

Query: 503 FDPIFPRF 510
             P+F + 
Sbjct: 571 -SPLFQKL 577


>gi|171320877|ref|ZP_02909876.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093862|gb|EDT38994.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 723

 Score =  329 bits (843), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 136/548 (24%), Positives = 230/548 (41%), Gaps = 51/548 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT K  +++     +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEKEGVTPKQLIERVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G + +   + + P + +          
Sbjct: 135 RAIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHHFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L + +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDREGIDFDAWIRAGSTAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     +  I  + + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLRDAIASIAAHYEGREYSRALRHTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGF 497
                  V++E  R L++ L+  +P++A  +     V     AD  +   S+ Q +K   
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGVAPLTWADAAKPLSSV-QPIKAYQ 547

Query: 498 MLHKTFDP 505
            L    DP
Sbjct: 548 HLMTRVDP 555


>gi|47226183|emb|CAG08330.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 492

 Score =  329 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 181/476 (38%), Positives = 262/476 (55%), Gaps = 23/476 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E    YI+T I Y NA PH+GH Y ++IAD   R  +L G +  FTTGTDEHG KI +A
Sbjct: 9   TENRNYYITTPIFYVNASPHLGHLYSVVIADCFHRQKQLQGFNSRFTTGTDEHGLKIQQA 68

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG     F    S  FR++    +IS  D+IRTTE RHH   R  W  +  KG IYK
Sbjct: 69  AEAAGRDPLTFCTSVSERFRNLFSSCNISNTDYIRTTEPRHHRAVRHFWSVLYGKGLIYK 128

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKL 176
           G Y GWYS +DE++    +V    D +    +      + V+WM+EE Y FRLS ++ +L
Sbjct: 129 GRYEGWYSTQDESFLMPSQVTTAQDSEGKEIKISLESGHKVEWMKEENYMFRLSRFRLQL 188

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L +   +P  I P    + V+  ++  L DLS+SR+     WGI +PDDP+  +YVW+DA
Sbjct: 189 LDWLRENPRAIQPERFYHSVLQLLQEELPDLSVSRQKSRLQWGIPVPDDPEQTIYVWLDA 248

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT   Y  N      ++W    HVIGKDIL+FHAIYWPAFLL A LPLP+ +  H 
Sbjct: 249 LVNYLTVVDYPHNH----ERWWNVAHHVIGKDILKFHAIYWPAFLLGAGLPLPQTIHVHS 304

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKSLGNV+DP E  +    D LRYFL+R+     D  Y  D ++K +N++L
Sbjct: 305 HWTVAGKKMSKSLGNVVDPRERSQAFTNDGLRYFLLRQGVPDADCDYRDDKVRKLLNSEL 364

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP-TPGAFT--------ESDESILSVCSRVLQEIRENM 405
           A+ +G L++R  +  L       P  P AF         + D  +L     +   + ++ 
Sbjct: 365 ADALGGLLNRCTAPALNPAQVYAPFCPDAFPGQRGGRAVDEDYRMLDSVKHLPAVVEQHF 424

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR---ASTVLYVTVEVIRQL 458
           +N  +++AL  + + V + + +     PW+L + +       STV++V+  ++  L
Sbjct: 425 ENMHVYKALEAIGACVRQTNGFVQRHAPWKLDRGDAGDQRWLSTVIHVSPRMLEDL 480


>gi|15828961|ref|NP_326321.1| methionyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|14424467|sp|Q50319|SYM_MYCPU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14089904|emb|CAC13663.1| METHIONYL-TRNA SYNTHETASE (METHIONINE--TRNA LIGASE) (METRS)
           [Mycoplasma pulmonis]
          Length = 509

 Score =  329 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 166/510 (32%), Positives = 266/510 (52%), Gaps = 7/510 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ +YI+T I YP+   H+GH Y   IA VL  + ++ G +  F+TG+DEHGQKI   AQ
Sbjct: 2   KKTIYITTPIYYPSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              + T+ +VD+ +  F D     +I YD F RTT K H +  R ++ K+ +K  IY   
Sbjct: 62  ELKLETQDYVDRQANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +  + +  K  +  ++   ++ +  +EEE YFF L+ + D +  + +  
Sbjct: 122 YVGLYSVSDEEFLTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQD 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                         +F+  GL++LS++R   DWGIKI    ++++YVW+DAL  YLT  G
Sbjct: 182 IISSK-AIVNELKSNFINKGLENLSVTRIKLDWGIKIDQSSKHVIYVWLDALFQYLTNLG 240

Query: 244 YLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           Y         KFW      +HV+GK+I RFH IYWP FL S N+ +P K+ SHG+I+   
Sbjct: 241 YGSKNQSLYEKFWKNGDERVHVVGKEITRFHCIYWPIFLKSLNVKMPTKIISHGWIVTPE 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP+ +IE+ G + L+YFL+ +++  KDG + ++ L    N DL N   N
Sbjct: 301 GKMSKSKGNVVDPVVLIEKYGSEVLKYFLIAKLSIKKDGVFSEELLVSAYNNDLVNTFSN 360

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+SR+V MIL +YD  +    +  + D  I        +      +     +A    I+L
Sbjct: 361 LISRTVKMILNNYDRPLSFILSKDQEDLEIEKDIKNSFETFCSFAEEYEFDKAFESTINL 420

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +++ Y D  +PW L K +  +   VL   +  I  +A  L   +P+ + K+   L   
Sbjct: 421 GKKLNLYIDKTRPWLLTKED-QKLEIVLNRLLNGIYAMAFELSIVMPQTSQKLAKALGFE 479

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              +    L+   K   +  +  + +F R 
Sbjct: 480 SFEKS--KLEDFKKFDNIKIEKIENLFNRI 507


>gi|120612475|ref|YP_972153.1| methionyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|187645701|sp|A1TTU1|SYM_ACIAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120590939|gb|ABM34379.1| methionyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 706

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 142/541 (26%), Positives = 227/541 (41%), Gaps = 49/541 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K++++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  AA+ 
Sbjct: 4   RKIFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMQGAEVNFVGADDTHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   +   I +D++  T    +H+  R +++ +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKPYLEGFHIRFDNWHSTDAPENHELARQIYRDLQAAGLIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +   A + P   +E            
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHARDQYGDNCENCGAVYAPTDLIEPYSALSGAKPVL 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRN---------EVISFVKSGLKDLSLS 210
              + +FF+LS  +        +    + P                      GL D  +S
Sbjct: 184 KSSDHFFFQLSDPRCVAFLQEWTQDGRLQPEVANKVKEWFSVRTNPDGTTSEGLGDWDIS 243

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265
           R    +GI+IPD P    YVW+DA   YL +   L    G     + AD     +H IGK
Sbjct: 244 RDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLEKRGQSYDDYVADPQLEQVHFIGK 303

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGVD 323
           DI+ FH ++WPA L  +    P  VF HGF+  + GEK+SKS G  +DP++ +   +  +
Sbjct: 304 DIVTFHTLFWPAMLKFSGRKTPDAVFVHGFLTVNNGEKMSKSRGTGLDPLKYLGLGMNAE 363

Query: 324 ALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   + K + G +  P A
Sbjct: 364 WLRYYLAAKLNGRNEDIDFNAEDFMARVNSDLIGKFVNIASRAAGFLTKRFGGRLGAPDA 423

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
              +   +L         I E  + +   RA+ + + L   V+ Y DA+KPWEL K    
Sbjct: 424 DGAA---LLEALRAQAGAIAEAYERRDTARAVRETMLLADRVNEYVDARKPWELAKQEGQ 480

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            A         +E  R L + L+  +P LA ++   L V  +   F      L  G  + 
Sbjct: 481 EAALQAACTTCIEAFRLLTLYLKPVLPALAAQVEAFLNV--QPLTFADAPALLGEGHAIG 538

Query: 501 K 501
            
Sbjct: 539 A 539


>gi|311694183|gb|ADP97056.1| methionyl-tRNA synthetase [marine bacterium HP15]
          Length = 676

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 127/542 (23%), Positives = 235/542 (43%), Gaps = 47/542 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+  R+ ++ G +  +    D HG  I   
Sbjct: 6   KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRYQKMRGQNCYYVCADDAHGTAIMLR 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T++  +D+     ++      I +D++  T  + +      +++++ + G I  
Sbjct: 66  AEREGITSEQLIDRIREEHQEDFAGFHILFDNYYTTHSEENRYFSEYIYRQLQENGHIAT 125

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
              +  Y      +  D            E   G + +   A + P + +          
Sbjct: 126 RKITQSYDPEKNMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 185

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFF+L  +QD L  +  S     L  +  N++  ++ +GL++  +SR    +
Sbjct: 186 PIEKESEHYFFKLPDFQDFLAKWTRSGT---LQPQVANKLAEWLDAGLQEWDISRDAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   YL +     +        FW AD      H IGKDI+ F
Sbjct: 243 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKADSTAEVYHFIGKDIINF 302

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L  A    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 303 HALFWPSMLHDAGFRTPTAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLNPEYLRYYFA 362

Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + +    RVN+DL   + N+ SRS   I K +DG +           +
Sbjct: 363 AKLTGSVDDMDLNLEDFAARVNSDLVGKVVNIASRSAGFITKRFDGQLGQVTE-----HA 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            L       +EI E  +++   RA+ +++ L    ++Y + ++PW + K     +    +
Sbjct: 418 KLKEFIEAGKEIEEYYESREFGRAMRRIMELADIANQYVNDEQPWVIAKQEGQDENLQAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + +   L   L   +P+ A      L        + +  +RL+    ++K F P+ 
Sbjct: 478 CTNAINMFHLLMTYLAPVLPETAKASEAFLNAP---LDWNNRSERLE-NHGINK-FKPLM 532

Query: 508 PR 509
            R
Sbjct: 533 NR 534


>gi|325523984|gb|EGD02180.1| methionyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 718

 Score =  329 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 127/519 (24%), Positives = 219/519 (42%), Gaps = 45/519 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +++     +   D   +S+D+F  T  + +      ++  + + G I +
Sbjct: 75  AEKEGLTPKQLIERVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSEKIYLALKENGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGVDFDAWIRPGSTAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDLDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I    + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVAKLRDAIPQIAAQYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V++E  R L++ L+  +P++A  +     +A 
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGIAP 527


>gi|207721382|ref|YP_002251823.1| methionyl-trna synthetase [Ralstonia solanacearum MolK2]
 gi|206586541|emb|CAQ17128.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 688

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 132/531 (24%), Positives = 217/531 (40%), Gaps = 46/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C  ++ K+ + G I 
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLKEAGLID 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 120 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 180 TPVRKSSEHYFFKLSDPRCETFLREWVA-DLAQPEATNKMREWLGDEGESTLSDWDISRD 238

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 239 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKD 298

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 299 ILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 358

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 359 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALGN 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 419 P----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQRD 474

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +      V +E  R LA+ L+  +P    +I   L V  E   ++++D +L
Sbjct: 475 KLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNV--EPLNWRAIDAQL 523


>gi|47459150|ref|YP_016012.1| methionyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458479|gb|AAT27801.1| methionyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 509

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 175/511 (34%), Positives = 281/511 (54%), Gaps = 9/511 (1%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YIST I YPN   H+GH Y M IA  +  + +L G   L  TG+DEHGQKI ++A+ 
Sbjct: 2   KKFYISTPIFYPNGDLHLGHLYSMSIAWAIRNYKKLKGYQTLLLTGSDEHGQKIMQSAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++ K FVDQ +  F+      DI YD F+RTT+K+H+     +  K+++   IYK  Y
Sbjct: 62  NNLSPKNFVDQQAEKFKSFWKKFDIEYDVFVRTTDKKHNSVIEKILTKLNENNFIYKSFY 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ DE +    +  +     ++   ++ ++ ++EE YF ++S +Q+ L  Y E +P
Sbjct: 122 EGLYSISDEEFLTKTQAKEVNGKFFHPVSNHELKIVKEESYFLKISQFQNWLKKYLEDYP 181

Query: 185 EFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            FI   +  NE+ S      L+DLS+SR +FDWGIK   D ++I YVW+DAL +Y  +  
Sbjct: 182 NFISSQKVINELKSTFLNEKLEDLSISRNSFDWGIKFSFDNKHIAYVWVDALFSY-LSPL 240

Query: 244 YLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            L          W  D+   HV+GK+I RFH IYWP  L   NLPLP K+ SHG+++   
Sbjct: 241 ELFLNQEKFNSSWNDDVEKIHVVGKEITRFHGIYWPIMLKMLNLPLPNKILSHGWLITST 300

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN+++P++++EE   + ++ +L+   +  +DG +DK+ +K   N+ LAN  GN
Sbjct: 301 GKMSKSKGNIVNPLDLLEEFDSETIKLYLLSAFSINRDGVFDKENIKFFYNSFLANNYGN 360

Query: 361 LVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L+SR  S+  +++   I     +  + D SIL    +  ++   N  N  I +A+  +I 
Sbjct: 361 LISRVSSLFSQNFSSKISWDQNSLDKIDYSILDKIEKSKEDFMSNFDNFEIDKAVEILIK 420

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L +E++ Y D  K W L K +  R +T+L + +  I  ++  L+ F+P    KI    F 
Sbjct: 421 LGNELNGYVDLTKAWLL-KDDKKRLATILLILINGIYAMSAYLKIFMPLKIEKIERDFFQ 479

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +N   ++++   K   +  K  + IF R 
Sbjct: 480 --QNASLENIENWKKFDDIFIKKIESIFNRI 508


>gi|83746715|ref|ZP_00943764.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Ralstonia solanacearum UW551]
 gi|83726668|gb|EAP73797.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Ralstonia solanacearum UW551]
          Length = 712

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 132/531 (24%), Positives = 217/531 (40%), Gaps = 46/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 25  MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C  ++ K+ + G I 
Sbjct: 84  RAEKEGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLKEAGLID 143

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 144 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 203

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 204 TPVRKSSEHYFFKLSDPRCETFLREWVA-DLAQPEATNKMREWLGDEGESTLSDWDISRD 262

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 263 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKD 322

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 323 ILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 382

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 383 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALGN 442

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 443 P----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQRD 498

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +      V +E  R LA+ L+  +P    +I   L V  E   ++++D +L
Sbjct: 499 KLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNV--EPLNWRAIDAQL 547


>gi|299142102|ref|ZP_07035236.1| methionine--tRNA ligase [Prevotella oris C735]
 gi|298576564|gb|EFI48436.1| methionine--tRNA ligase [Prevotella oris C735]
          Length = 687

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 129/543 (23%), Positives = 243/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+     +   +   IS+D + RTT K H       +KK+ D+G
Sbjct: 61  ITLRAKKEGITPQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKTHSKLASDFFKKLYDEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLIEKESEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTI 180

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ  L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSKPVIRKTKNWYLPLNDYQGWLKKWILDEHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + +  K    + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGSWEKWWKDPDTRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P       +  LP  V ++ F+  + +KIS S    +   E ++E+ 
Sbjct: 299 IGKDNIVFHCIIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLQELP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D + L+    V +++   +       A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELQDVDRAALNEFKDVKEKVEAYLDVFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LK G  L
Sbjct: 479 DPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMVSFDWSELGNTNLLKAGHRL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|308456710|ref|XP_003090777.1| hypothetical protein CRE_09872 [Caenorhabditis remanei]
 gi|308260732|gb|EFP04685.1| hypothetical protein CRE_09872 [Caenorhabditis remanei]
          Length = 934

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 114/549 (20%), Positives = 216/549 (39%), Gaps = 44/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      
Sbjct: 47  GKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETK 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T +   D+     + + +   I +  F RTT     + C+ ++ K+   G    
Sbjct: 107 ALQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNGYTST 166

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR-- 168
                 +    + +  D  V            +G          N V+    + +  +  
Sbjct: 167 QSVDQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKCHMCKSA 226

Query: 169 ----------------LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                                  L      +P+            S+ K GL+   ++R 
Sbjct: 227 PEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEPRCITRD 286

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDI 267
              WG  +P +   + + YVW DA   YL+ T  +   D +K    P ++   + +GKD 
Sbjct: 287 -LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPKNVELYNFVGKDN 345

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDA 324
           + FHA+ +P   L A  N  +   + +  ++ ++  K SKS G  I         +  D 
Sbjct: 346 VAFHAVMFPCSQLGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFGDAAQGTGIPADI 405

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G+IP     T
Sbjct: 406 WRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVSNFFGGVIPEI-QLT 464

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP 441
           ++D   L   ++  ++  +      +  A+  ++++    ++Y  AQ PW L K      
Sbjct: 465 DADAEFLEEVNKECEQWDKQFDRVHLKDAVKSILNVSRLGNQYMQAQTPWVLMKGSDEEK 524

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            RA T++ V   +   LA++L   +P ++  I +   +             LK G  + K
Sbjct: 525 KRAGTIIGVAANIAYHLAVILYPVMPSISATIREQCGLPKLPIFSPFPINYLKSGHKIGK 584

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 585 P-SPLFQKL 592


>gi|312959251|ref|ZP_07773769.1| Methionyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311286511|gb|EFQ65074.1| Methionyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 683

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 224/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T  + + +    ++ ++ + G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFAEFLVDFDNFHSTHCEENRELSSQIYLRLKEAGHID 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------ 163
           +   + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 QRSVTQYFDPEKKMFLADRFIKGTCPKCGTEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    +FF+L  +Q  L ++  S     L     N++  ++ SGL+   +SR    
Sbjct: 181 TPVLKDSQHFFFKLPDFQQMLQTWTRSGT---LQDAVANKLSEWLDSGLQQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L +         FW  D      H IGKDI+
Sbjct: 238 FGFEIPGEPGKFFYVWLDAPIGYMASFKNLCDRTPELDFDAFWGKDSTAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FHA++WPA    +    P  +  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHALFWPAMREGSGYRKPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLAPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  
Sbjct: 358 YASKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAENAAPELT 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
           ++ L+        I +  + +   RA+ +++ L    + +   + PW L K    +A   
Sbjct: 418 DAFLA----AAPSIADAYEARDFARAMREIMGLADRANAWIADKAPWSLNKQEGKQAEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    V + RQL I L+  +P LA      L V        +    L     L++ F P
Sbjct: 474 AICATGVNLFRQLVIFLKPVLPLLAADAEAFLNVPPLTWNDHA---TLLSNHQLNE-FKP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|109898216|ref|YP_661471.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064668|sp|Q15UM1|SYM_PSEA6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109700497|gb|ABG40417.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 675

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 234/544 (43%), Gaps = 47/544 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ +++A+ Y N   H+GH  E I  D+  RF R+ G ++      D HG  + 
Sbjct: 1   MSSQPRKILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRMCGHEIYSVCADDAHGTPVM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             AQ  G+T +  V +             + YD++  T    + +   +++ +++D G I
Sbjct: 61  LKAQELGITPEEMVARTREEHHQDLLDFFVEYDNYHVTHSDENKELSELIYNRLNDAGYI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQW--------- 159
            K   S  +      +  D            E   G       A ++P +          
Sbjct: 121 SKRTISQLFDPEKNMFLPDRFVKGTCPSCGAEDQNGDSCDNCGATYDPTEMKNPRSVVSG 180

Query: 160 -----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E +FF L  + D L ++ +S     L  E  N++  + + GL+   +SR   
Sbjct: 181 ATPILKDSEHFFFDLPQFSDMLQNWLKSDA---LQSEISNKLEEWFEKGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP  P    YVW+DA   Y+ +     D    +  ++W AD      H IGKDI 
Sbjct: 238 YFGFEIPGAPNKFFYVWVDAPVGYMASFKNLCDRSGINFDEYWGADSDAELYHFIGKDIT 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HGF+   G K+SKS G  I     +E +  + LRY+
Sbjct: 298 YFHCLFWPAMLEGAGFRKPTGVNVHGFVTVNGAKMSKSKGTFIKGRTYLEHLNPEYLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR  S I K +DG +         +
Sbjct: 358 FASKLGANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSD----NVLE 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
            ++++        I +  + +  H+A+ ++++L  + +++ DA  PW   K    +A T 
Sbjct: 414 PALVAEFQHAQASIAQAFEERQYHKAIREIMALADKANQFIDANAPWVTIKDESKQAFTH 473

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + R L + L+  VPKLA +    L    ++  + S    L  G  ++K F  
Sbjct: 474 DVCSLGINLFRLLMVYLKPVVPKLAEQAEAFLN---DDLSWSSAQSVLT-GHEINK-FKA 528

Query: 506 IFPR 509
           +  R
Sbjct: 529 LMQR 532


>gi|67624509|ref|XP_668537.1| methionine -- tRNA ligase [Cryptosporidium hominis TU502]
 gi|54659719|gb|EAL38284.1| methionine -- tRNA ligase [Cryptosporidium hominis]
          Length = 562

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 182/519 (35%), Positives = 292/519 (56%), Gaps = 18/519 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y +TAI Y N  PH+GHAYE++ +D+L R  RL G +  F TGTDEHGQKIA  A+ 
Sbjct: 14  KYYYFTTAINYTNGTPHMGHAYEIVTSDILVRIARLFGFNTRFQTGTDEHGQKIAATAEK 73

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K   D+N + F++M + L IS D FIRTT+  H+++C+ LW++   KGDIY G Y
Sbjct: 74  KGISPKELCDENVKQFKNMNEKLQISTDRFIRTTDTDHYESCKELWRRCEAKGDIYLGKY 133

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWY++R+E++  + E               P+  MEE  YFFR++ Y + + ++   +P
Sbjct: 134 NGWYNVREESFMTELEAKMLN--YTDPISGLPLTKMEEPSYFFRITNYLESIKNHIIDNP 191

Query: 185 EFILPIERRNEVISFVK---SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           EFI P   R  +++ ++   S  +DLS+SR +F WG+ +P+D +++MYVW DALTNY+T 
Sbjct: 192 EFIQPESSRESILARLEALGSNSEDLSISRASFSWGVPVPNDQEHVMYVWFDALTNYITG 251

Query: 242 TGYLDNPDGSKA-----KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
             + D  +  +      K+W   +H++GKDI  FH++ WPA LLS  L LPK +F+HGF+
Sbjct: 252 LKWADFDNDLEENSLFNKYWENTVHIVGKDITWFHSVIWPAMLLSVGLSLPKTIFAHGFV 311

Query: 297 LH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G+K+SKSLGNV+DP E I+++G D  RY+L RE   G D  Y    +    N +LA
Sbjct: 312 TAPDGKKMSKSLGNVVDPFEQIDKMGSDPFRYYLAREGRFGNDIKYQPSSVLDYNNGELA 371

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +  GNL+SR  ++  K   G+ P+       D+ +     +V +E         I     
Sbjct: 372 DTYGNLISRITNLTHKFCQGVAPSLSQSLLLDKPV--DIDKVFEEYYLAWHCFRIDECTQ 429

Query: 416 QVISLVSEVDRYFDAQKPWELK--KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             + L   V+++     PW     K++ +R   ++ + +E    ++ILL  F+     ++
Sbjct: 430 IAMDLSRNVNKFLTDHAPWNKDNGKSDEERIE-IIRIVLEGSYYISILLSPFITLACKEV 488

Query: 474 FDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRFL 511
           F+ L   ++      ++   +KPG  +    +P+F R +
Sbjct: 489 FNRLGTPEKIIPEVDINYNNIKPGTPIL-IGEPLFKRIV 526


>gi|303236923|ref|ZP_07323502.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483091|gb|EFL46107.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 687

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 125/543 (23%), Positives = 246/543 (45%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M +++  +  ++ A+ Y N   HIGH A   + +D+  R+ RL   +VLF  G+DEHG  
Sbjct: 1   MTDKKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVLFVGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  +D  +   IS+D + RTT + HH      ++K+ D+G
Sbjct: 61  ITLRAKKEGITPQEVCDRYHKMIKDSFEEFGISFDVYSRTTSETHHKFASDFFRKLYDEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +      Y    + +  D  V             G   +   +  +P++ +      
Sbjct: 121 KLIEKESEQLYDEEAKQFLADRYVMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+ L  +  +  +   P     +  S++   L+  +++R 
Sbjct: 181 SGSKPVVKTTKNWYLPLNDYQEWLKQWILNDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHV 262
             +WGI +P +     ++YVW DA   Y++ T  L + +     K + W  D     +H 
Sbjct: 240 -LNWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCDSNPERFGKWEKWWQDDETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P+      +  LP  V S+ F+  + +KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCIIFPSMLKAHGDYILPDNVPSNEFLNLENDKISTSRNWAVWLHEYLVDFP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++P 
Sbjct: 359 NKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTQKYWGGIVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D   +     V +++   +       A  + ++L    +RY    +PW++ KT
Sbjct: 419 CGELQDVDRQTIQEFKDVKEKVESYLDVFKFREAQKEAMNLARIGNRYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+L ++++++  L+I  + F+P  + ++ +++ +A+ +         L  G  L
Sbjct: 479 DPKRVETILNISLQLVANLSIAFEPFLPFSSKELRNLINLAEYDWTQLGSTDILAAGHQL 538

Query: 500 HKT 502
           ++ 
Sbjct: 539 NEP 541


>gi|332018089|gb|EGI58703.1| Methionyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 547

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 171/503 (33%), Positives = 261/503 (51%), Gaps = 24/503 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI+T I Y NA PHIGH Y  ++AD + R++ + G    FTTGTDEHG KI  AA  
Sbjct: 19  QNKYITTPIFYVNAGPHIGHLYSAVLADAIVRYNNMLGHQTFFTTGTDEHGNKIKAAAAT 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV    +  + S+ FR+M D  ++ Y  FIRTTEK+H D     WK++ ++G IY G Y
Sbjct: 79  AGVPNLEYCTRISQQFREMCDKFEVDYSRFIRTTEKQHCDAVYHFWKQLEERGHIYLGKY 138

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSY 179
           SGWY + DEA+  D E+ +  D      +      N V+W EEE Y FRLSA+Q+ L  +
Sbjct: 139 SGWYCVSDEAFLCDTELVEQRDSTGKVIKVSAESGNIVEWTEEENYKFRLSAFQNDLKYW 198

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS----RKTFDWGIKIPDDPQYIMYVWIDAL 235
            +       P      +  ++  G     LS    R    W I  P D  + +YVW+DAL
Sbjct: 199 LKDENTVR-PALYHKTLSQWIDEGTCLQDLSITRIRNKMPWAIPSPCDESHSIYVWLDAL 257

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY +         WP  + +IGKDIL+FH IYWPAFL++  L  PK +  H  
Sbjct: 258 INYLTVLGYPNESYKEL---WPPTIQIIGKDILKFHGIYWPAFLIAIGLEPPKTLLCHAH 314

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS GNVI P E   +   + LRYF++RE     D  Y    +   +N++LA
Sbjct: 315 WTVDHRKMSKSKGNVISPFEAANDYSEEGLRYFILREAVPQNDANYSPIKIINTLNSELA 374

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLI 410
           + +GNLV+R V   + +     P P  +     ++  +        V ++ RE+ +   +
Sbjct: 375 DTLGNLVNRCVGKAI-NPSKEFPNPARYWNVLQSQVADETRESLKSVGRKARESYEEYNL 433

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK-----TNPDRASTVLYVTVEVIRQLAILLQAF 465
           H  +  V++++   ++     +PW+L+K      + +    V+ + +E  R  A++L   
Sbjct: 434 HHVVDAVMNMLHCANKMVAHHEPWQLRKQVDNADSIEELKAVISLALESSRIGALILYPI 493

Query: 466 VPKLANKIFDILFVADENRCFQS 488
           +P+L++ + D L +  ENR + +
Sbjct: 494 IPRLSSSLLDFLNIPKENRTWAN 516


>gi|308491426|ref|XP_003107904.1| CRE-MARS-1 protein [Caenorhabditis remanei]
 gi|308249851|gb|EFO93803.1| CRE-MARS-1 protein [Caenorhabditis remanei]
          Length = 920

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 114/549 (20%), Positives = 216/549 (39%), Gaps = 44/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      
Sbjct: 33  GKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETK 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T +   D+     + + +   I +  F RTT     + C+ ++ K+   G    
Sbjct: 93  ALQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNGYTST 152

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR-- 168
                 +    + +  D  V            +G          N V+    + +  +  
Sbjct: 153 QSVDQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKCHMCKSA 212

Query: 169 ----------------LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                                  L      +P+            S+ K GL+   ++R 
Sbjct: 213 PEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEPRCITRD 272

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDI 267
              WG  +P +   + + YVW DA   YL+ T  +   D +K    P ++   + +GKD 
Sbjct: 273 -LKWGTPVPLEGFEKKVFYVWFDAPIGYLSITKCVLGDDWTKWWKNPKNVELYNFVGKDN 331

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDA 324
           + FHA+ +P   L A  N  +   + +  ++ ++  K SKS G  I         +  D 
Sbjct: 332 VAFHAVMFPCSQLGANDNYTVVNHLCATEYLNYEDTKFSKSRGTGIFGDAAQGTGIPADI 391

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G+IP     T
Sbjct: 392 WRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVSNFFGGVIPEI-QLT 450

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP 441
           ++D   L   ++  ++  +      +  A+  ++++    ++Y  AQ PW L K      
Sbjct: 451 DADAEFLEEVNKECEQWDKQFDRVHLKDAVKSILNVSRLGNQYMQAQTPWVLMKGSDEEK 510

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            RA T++ V   +   LA++L   +P ++  I +   +             LK G  + K
Sbjct: 511 KRAGTIIGVAANIAYHLAVILYPVMPSISATIREQCGLPRLPIFSPFPINYLKSGHKIGK 570

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 571 P-SPLFQKL 578


>gi|237746649|ref|ZP_04577129.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378000|gb|EEO28091.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 695

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 148/554 (26%), Positives = 240/554 (43%), Gaps = 54/554 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-----LDVLFTTGTDEHGQKIA 59
            KL+++TA+ Y NA  HIGH  E I AD+  RF R+        +V F    D HG  I 
Sbjct: 3   RKLFVTTALPYANAPFHIGHIMEYIQADIWVRFQRMQQDNGKQREVHFVGADDVHGAPIM 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA+ AG T + FV + +       +   IS+D++  T    +++  R +++++  KG I
Sbjct: 63  IAAEKAGKTPQEFVAEIAAGRAAPLNGFLISFDNWHSTDGSENYELSREIYRRLKAKGLI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------ 162
                  ++    E +  D  +             G   +  ++ + P +          
Sbjct: 123 ESKTIEQFFDPVKEMFLPDRYIKGECPKCGAKDQYGDTCESCSSVYTPTELKNPYSILTG 182

Query: 163 --------EGYFFRLSAYQDKLLSYYE-----SHPEFILPIERRN-----EVISFVKSGL 204
                   E +FF+LS  Q                  + P          E     ++ L
Sbjct: 183 ATPVMKQSEHFFFKLSDPQCTAFLKEWTLGNVDGEPRLQPEVANKAREWLEGKEGEENAL 242

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----- 259
            D  +SR    +GI+IPD P    YVW+DA   YL +     N  G     + AD     
Sbjct: 243 SDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNYFNKTGGDYDAFMADPETEQ 302

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIE 318
            H IGKDI+ FH ++WPA L  A++ +P  V+ HGFI   GEK+SKS G  I P+  +  
Sbjct: 303 YHFIGKDIIYFHTLFWPAMLHFADMRVPDNVYVHGFITVGGEKMSKSRGTGISPLRYLEI 362

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+L  +++   +D  +  D    RVNADL     N+ SR+   I K + G +
Sbjct: 363 GMNPEWLRYYLAAKLSDRVEDIDFTGDDFIARVNADLVGKYVNIASRAAGFITKRFGGKL 422

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                +   D  +L        EI E  + +   +AL Q++ L  EV+ Y DA KPW L 
Sbjct: 423 AK--DWKTEDTPVLDTLRAASGEIAELYEKREFGKALRQIMHLADEVNAYVDANKPWVLA 480

Query: 438 K--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K     +    V    +E  R L+I L+  +P ++ K+   L +      +  +++ L+ 
Sbjct: 481 KDPEKSEALHQVCTRLLEAFRILSIYLKPVLPAVSEKVEAFLNLPP--LQWSDVEKPLED 538

Query: 496 GFMLHKTFDPIFPR 509
              ++  ++ +  R
Sbjct: 539 SHAIN-PYEHLMQR 551


>gi|254247500|ref|ZP_04940821.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872276|gb|EAY63992.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 756

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 132/547 (24%), Positives = 228/547 (41%), Gaps = 48/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 53  QGSRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLR 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +
Sbjct: 113 AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSENIYLALQEAGLIAE 172

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 173 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 232

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  S+       +   E  N++  +     +S L D  +SR 
Sbjct: 233 PVRKTSKHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRD 290

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKD
Sbjct: 291 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKD 350

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 351 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 410

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 411 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 466

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N  
Sbjct: 467 AMNHPLVAKLRDAIAQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAV 526

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                  V++E  R L++ L+  +P++A  +     +A     +    + L     + K 
Sbjct: 527 ALHETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGIAP--LAWADAAKPLSSAQPI-KA 583

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 584 YQHLMTR 590


>gi|282859895|ref|ZP_06268983.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587298|gb|EFB92515.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 687

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 125/543 (23%), Positives = 240/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + +D+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+     +D      IS+D + RTT   H+      +KK+ ++G
Sbjct: 61  ITIRAKKEGITPQDVCDRYHSMIKDSFKDFGISFDVYSRTTSDVHNKLASDFFKKLYEEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +      Y    + +  D  V             G   +   +  +P++        
Sbjct: 121 KLVEKESEQLYDEEAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSQPVLKNTKNWYLPLNDYQEWLKEWILKEHQEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + +  K    + W  D     +H 
Sbjct: 240 -LDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELCDNEPEKFGNWEKWWKDPETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P          LP  V S+ F+  + +KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCIIFPTMLKAHGGYILPDNVPSNEFLNLENDKISTSKNWAVWLHEYLVDFP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWNGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D+  ++    V +++   +       A  + ++L    +RY    +PW++ KT
Sbjct: 419 CGELLDVDKQAIAEFQDVKEKVEAFLNVFKFREAQKEAMNLARIGNRYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+L ++++++  L+I  + F+P  + ++  ++ + +           LK G  L
Sbjct: 479 DPKRVETILNISLQLVANLSIAFEPFLPFSSAELRKLINLTECEWSELGSTDLLKAGQQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|93006420|ref|YP_580857.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|122989863|sp|Q1QAD0|SYM_PSYCK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|92394098|gb|ABE75373.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 700

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 136/555 (24%), Positives = 235/555 (42%), Gaps = 56/555 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK RE + +++A+ Y N   H+GH  E I  D+  R  +  G  V +    D HG  I  
Sbjct: 1   MKVRE-ILVTSALPYANGDIHLGHLVEYIQTDIWVRSMKAQGHKVTYVCADDAHGTAIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ GVT +  +               I++D++  T  + + +   ++++++ D G I 
Sbjct: 60  KAEDNGVTPEQQIANVQAAHEADFAKFLINFDNYHSTHSEENREFSELIYRRLRDAGHIS 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                  +    + +  D  V             G + +     ++  +           
Sbjct: 120 TRDVEQLFDPEKQLFLADRFVKGTCPECAATDQYGDNCEVCGTTYDATELKNPYSTLSNA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + YFF L  ++  L     +  +  L     N++  +  +GL    +SR    
Sbjct: 180 TPILKTSKHYFFDLPEFEQFLKD--WTRSDNRLQTSVANKLQEWFDAGLTSWDISRDAPY 237

Query: 216 WGIKIPDD----PQYIMYVWIDALTNYLTTTGYLD-------------NPDGSKAKFWPA 258
           +G +IPD     P    YVW+DA   Y+ +   L              +    + +    
Sbjct: 238 FGFQIPDTPSDEPDKYFYVWLDAPVGYMASFQNLCDKRAGTEEALDFDHYWAQENEHKTE 297

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FHA++WPA L  + L  P  VF+HGF++  GEK+SKS G  I      E
Sbjct: 298 VYHFIGKDIVYFHALFWPAMLAGSELRTPTGVFAHGFLMVNGEKMSKSRGTFIKADTYAE 357

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+   +++   +D   D +   ++VN+DL   + N+ SRS   ++K YDGM+
Sbjct: 358 HLHPEYLRYYFASKLSDKVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFLVKKYDGML 417

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A      S+L   ++   EI    +N+   RA+  ++    + + Y D +KPW L 
Sbjct: 418 TDVCAEP----SLLEDITKTGDEIAAAYENREFSRAMRLIMQCADKANEYIDDKKPWALA 473

Query: 438 KTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K          V  V + + RQL + L   +P+L     + L + D    F S ++ L  
Sbjct: 474 KVEGAEQEVQDVCSVAINIFRQLMVYLAPVLPELTANAKEFLNIDD--LSFASRNEWLL- 530

Query: 496 GFMLHKTFDPIFPRF 510
           G  ++K F P+  R 
Sbjct: 531 GHQINK-FKPLMQRI 544


>gi|120598605|ref|YP_963179.1| methionyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146293316|ref|YP_001183740.1| methionyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|187647773|sp|A4Y7K8|SYM_SHEPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187647775|sp|A1RIY0|SYM_SHESW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120558698|gb|ABM24625.1| methionyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565006|gb|ABP75941.1| methionyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 689

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 233/543 (42%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      +I++D++  T    +      ++ K+   G I  
Sbjct: 63  AQQLGLAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSDENRVLASDIYLKLRTNGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           + L+      ++I E  + +   +A+ ++++L    + +     PW++ K +   + A  
Sbjct: 419 AFLAK----QEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +        +   +  L Q +  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQ---QTLTWDGLAQDM-AGHEI-SPFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|90417029|ref|ZP_01224958.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331376|gb|EAS46620.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 673

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 128/544 (23%), Positives = 236/544 (43%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + ++ ++ A+ Y NA  H+GH  E    DV  RF R+ G +  + +  D HG  I  
Sbjct: 1   MSSKRQILVTNALPYANAALHLGHVLEYTQTDVWVRFQRMRGHECYYLSADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++ +  +               IS D++  T  + + +   +++ +++  G I 
Sbjct: 61  KADEKGISAEQHIADMRAIHEADFKDFLISVDNYHTTHSEENREFSELIYNRLNANGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------- 160
           K   +  +      +  D            E   G + +   A ++P+  +         
Sbjct: 121 KREITQAFDPEKNLFLADRYIKGTCPKCKAEDQYGDNCEACGATYSPIDLINPVSAISGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E   YFF+L  +   L  +  S     +  E  N++  ++ SGL++  +SR    
Sbjct: 181 TPIEKESTHYFFKLPEFTQFLQDWTRSGA---VQDEVANKLGEWLDSGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IPD P    YVW+DA   Y+ +     D        +W AD      H IGKDI+ 
Sbjct: 238 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDREGMDFDHYWKADSTTELYHFIGKDIVN 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L SA    P K+  HGF+   G+K+SKS G  I+    ++ +  D LRY+ 
Sbjct: 298 FHALFWPAMLSSAEFRTPTKICVHGFVTVNGKKMSKSRGTFINARCYLDHLDPDYLRYYY 357

Query: 330 VREIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   +D   + +  +++VN+DL   + N+ SR    I    DG++       E   
Sbjct: 358 ASKLSGSVEDIDLNLEDFQQKVNSDLVGKVVNIASRCAKFIANGNDGVLSNNIDNPE--- 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + +  S   + I ++ +N+   +A+ ++++     + Y  A++PW+L K      +   
Sbjct: 415 -LWAQVSGAAETIAQHYENRDFSKAIREIMAQADAANEYIAAKEPWKLNKQEGMQQQVQD 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +    + + R L   L+  VP +     + L    +   ++S ++ L  G  L   F P+
Sbjct: 474 ICSQGINMFRVLMTYLKPVVPAMTIAAEEFLN---DTLSWESAEKPLL-GHQLT-PFKPL 528

Query: 507 FPRF 510
             R 
Sbjct: 529 MIRI 532


>gi|167737601|ref|ZP_02410375.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 725

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSPEQPV 543


>gi|319426616|gb|ADV54690.1| methionyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 689

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 233/543 (42%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      +I++D++  T    +      ++ K+   G I  
Sbjct: 63  AQQLGLAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSDENRVLASDIYLKLRANGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           + L+      ++I E  + +   +A+ ++++L    + +     PW++ K +   + A  
Sbjct: 419 AFLAK----QEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +        +   +  L Q +  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQ---QTLTWDGLAQDM-AGHEI-SPFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|53725214|ref|YP_102479.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|68565971|sp|Q62LE0|SYM_BURMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649794|sp|A3MLM5|SYM_BURM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649795|sp|A2SAF7|SYM_BURM9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649796|sp|A1V5W0|SYM_BURMS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52428637|gb|AAU49230.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
          Length = 725

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSPEQPV 543


>gi|171059439|ref|YP_001791788.1| methionyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|226710910|sp|B1XWM2|SYM_LEPCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|170776884|gb|ACB35023.1| methionyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 689

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 156/565 (27%), Positives = 235/565 (41%), Gaps = 69/565 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L+++TA+ Y N + HIGH  E I AD+  RF RL G  V F    D HG  I  AA+ 
Sbjct: 3   RQLFVTTALPYANGKFHIGHIMEYIQADIWVRFQRLMGHQVHFVGADDAHGAPIMIAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   R+  D   IS+D++  T    +H+  + +++ + D G I     
Sbjct: 63  AGKTPQQFVADIAAGRREYLDGFHISFDNWHSTDGPENHELAQSIYRALRDNGLIEVRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G   +   A + P +               
Sbjct: 123 EQFFDPEKGMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYTPTEVRNPYSALSGATPVL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLSLSRKT 213
              + YFF+LS  +        +H    L  E  N+V  +       K GL D  +SR  
Sbjct: 183 KSSDHYFFKLSDPRCAAYLEQWTHEGGKLQQEVINKVKEWFTKDDEGKGGLGDWDISRDA 242

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNY-----------LTTTGYLDNPDGSKAKFWPA--DL 260
             +GI+IPD P    YVW+DA   Y                Y +     +    PA    
Sbjct: 243 PYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDKGGPRAKYGEARSFDEFIADPAVEQY 302

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE- 318
           H IGKDI  FH ++WPA L  +    P  VF HGF+  + GEK+SKS G  +DP++ +  
Sbjct: 303 HFIGKDITYFHTLFWPATLHFSGRKTPNNVFVHGFMTVNNGEKMSKSRGTGLDPLKYLSL 362

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY++  ++    +D  ++ D    RVNADL     N+ SR+   + K + G  
Sbjct: 363 GMNAEWLRYYIAAKLNAHVEDVDFNPDDFVSRVNADLVGKYINIASRAAGFLAKRFGGR- 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                      S+L         +    + +   +AL +V+ L   V+ Y DA KPWEL 
Sbjct: 422 -LSSDLGVDGMSLLETLRAHRDTLTGLYEAREFGKALREVMGLADRVNEYVDANKPWELA 480

Query: 438 KTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR----------- 484
           K     A    V  V +E  R L I L+  +P LA ++   L V                
Sbjct: 481 KKEGADAVLHDVCSVCIEAFRLLTIYLKPVLPALAAQVESFLQVEPLTFAQAHRALGAHT 540

Query: 485 --CFQSLDQRLKPGFMLHKTFDPIF 507
              +Q L QR+ P     K  D +F
Sbjct: 541 IGSYQHLMQRVDP-----KLLDALF 560


>gi|238020730|ref|ZP_04601156.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147]
 gi|237867710|gb|EEP68716.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147]
          Length = 688

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 127/547 (23%), Positives = 224/547 (40%), Gaps = 46/547 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I  
Sbjct: 1   MTSKRKILVTSALPYANGAIHLGHMVEHIQTDIWVRFQKSRGHECYYCCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T +  + +             I YD++  T    +      +++ +   G I 
Sbjct: 61  AAEKQGITPEQLIAKTHGEHLADFTGFGIGYDNYYSTHSPENQTLSEQIYRSLKANGKII 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ----------- 158
               +  +    + +  D  V             G + +     + P +           
Sbjct: 121 SKTINQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYAPTELIKPYSAVSGA 180

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSRK 212
                E E +FF+LS   D L  +   E++    L  E  N++  ++K G L D  +SR 
Sbjct: 181 TPVMKETEHFFFKLSDCGDYLKQWTAGETNGRAHLQPEALNKMNEWLKEGELSDWDISRD 240

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IPD P    YVW+DA   Y+ +   L    G     +          H IGKD
Sbjct: 241 APYFGFQIPDAPNKYFYVWLDAPVGYMASFQNLCARKGLDFNEFFGKDSQTELYHFIGKD 300

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FHA++W A L  +    P  +F+HGF+   G+K+SKS G  I     +E+ +  + +
Sbjct: 301 ILYFHALFWTAMLEYSGHRAPSGIFAHGFLTVDGQKMSKSRGTFITARSYLEQGLNPEWM 360

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY++  +  +  +D   +      RVN+DL     N+ +R+   I K + G +       
Sbjct: 361 RYYIAAKLNSKIEDIDLNLQDFIARVNSDLVGKYVNIAARAAGFIHKRFSGCLKDVSGS- 419

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-- 442
                I+   +   + I    + +   +AL +++ L   V+ Y D  KPWEL K      
Sbjct: 420 ----EIVKHLAAESERIASLYEEREYGKALREIMILADVVNEYVDENKPWELAKLEGADS 475

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           R   V    +   + L + L   +P++A +  + L +  E   +    + L    ++ K 
Sbjct: 476 RLHKVCSELINAFKILTVYLSPVLPRVAEQAAEFLGL--EKLVWADASRTLSENHVI-KP 532

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 533 YQHLMQR 539


>gi|242017977|ref|XP_002429460.1| methionyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212514392|gb|EEB16722.1| methionyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 551

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 175/494 (35%), Positives = 279/494 (56%), Gaps = 19/494 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   +++T I Y NA+PHIGH Y   I D ++R+ +L   +V +  GTDEHG K++KAA+
Sbjct: 30  KSTYFLTTPIFYVNAEPHIGHLYTTTIGDAISRYKKLKNCNVKYMVGTDEHGLKVSKAAK 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +  + F D  S  ++ + +  DI Y+DFIRTTEKRH  T   LW KIS    IYKG 
Sbjct: 90  ALNLNVETFCDNVSEKYKSLFNAFDIRYNDFIRTTEKRHKKTAIELWDKISSVDLIYKGE 149

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           YSGWY   DE +  ++E+    D   +Y   +   V ++ E  Y F+LS +Q+ LL + +
Sbjct: 150 YSGWYCEADETFIPENELEPNDDPLVRYTLNEKKIVNYVTELNYKFKLSKFQNDLLHWLD 209

Query: 182 SHPEFILPIERRNEVISFVKSG--LKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTN 237
           S    I P + +  + ++++ G  LKDLS+SR T    WGI +P DP    YVW DAL++
Sbjct: 210 SGEI-IKPNKFQKILRNWIEEGNVLKDLSISRPTERVSWGIPVPKDPTQTFYVWFDALSS 268

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YL+T GY  +        WP DL +IGKDIL+FH ++WPAFL++A L  PK +  H   +
Sbjct: 269 YLSTDGYPYSNF-----KWPPDLQIIGKDILKFHGVFWPAFLMAAGLEPPKCILCHSHWM 323

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               KISKS GNVI+P    E+   D +RY+L++E     DG +    L   +NADLA+ 
Sbjct: 324 KDNMKISKSTGNVINPFSYAEKYSSDGVRYYLLKEGVAHSDGNFTDKKLIAMLNADLADK 383

Query: 358 IGNLVSRSVSMIL----KDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHR 412
            GNL+ R  S+ +    K    +      F  +D E++++    +  ++  + ++   ++
Sbjct: 384 FGNLLLRCTSLTINRNQKYPSFLKGDRKRFHTTDSENLINALQDLPDKVDMHFEDFNFYK 443

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            + ++I+ +S  +++F+++KPW L       D  + V+++T+E +R   ILLQ  +PK++
Sbjct: 444 GIDEIITTLSLTNKFFESEKPWYLANKSDESDHLNYVIHLTMESLRVCGILLQPIIPKIS 503

Query: 471 NKIFDILFVADENR 484
             + + L +    R
Sbjct: 504 ENLLNKLSIPISKR 517


>gi|326318528|ref|YP_004236200.1| methionyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375364|gb|ADX47633.1| methionyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 697

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 143/541 (26%), Positives = 227/541 (41%), Gaps = 49/541 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K++++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  AA+ 
Sbjct: 4   RKIFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMQGAEVNFVGADDTHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   +   I +D++  T    +H+  R +++ +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKPYLEGFHIRFDNWHSTDAPENHELARQIYRDLQAAGLIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +   A + P   +E            
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHARDQYGDNCENCGAVYAPTDLIEPYSALSGAKPVL 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRN---------EVISFVKSGLKDLSLS 210
              + +FF+LS  +        +    + P                      GL D  +S
Sbjct: 184 KSSDHFFFQLSDPRCVAFLQEWTQDGRLQPEVANKVKEWFSVRTNPDGTTSEGLGDWDIS 243

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265
           R    +GI+IPD P    YVW+DA   YL +   L    G     + AD      H IGK
Sbjct: 244 RDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLEKRGQSYDDYVADPQLEQYHFIGK 303

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGVD 323
           DI+ FH ++WPA L  +    P  VF HGF+  + GEK+SKS G  +DP++ +   +  +
Sbjct: 304 DIVTFHTLFWPAMLKFSGRKTPDAVFVHGFLTVNNGEKMSKSRGTGLDPLKYLGLGMNAE 363

Query: 324 ALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   + K + G + TP A
Sbjct: 364 WLRYYLAAKLNGRNEDIDFNAEDFMARVNSDLIGKFVNIASRAAGFLTKRFGGRLGTPDA 423

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
              +   +L         I E  + +   RA+ + + L   V+ Y DA+KPWEL K    
Sbjct: 424 DGAA---LLEALRAQAGAIAEAYERRDTARAVRETMLLADRVNEYVDARKPWELAKQEGQ 480

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            A         +E  R L + L+  +P LA ++   L V  +   F      L  G  + 
Sbjct: 481 EAALQAACTTCIEAFRLLTLYLKPVLPALAAQVEAFLNV--QPLTFADAPALLGEGHAIG 538

Query: 501 K 501
            
Sbjct: 539 A 539


>gi|284159400|ref|YP_441412.3| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83654898|gb|ABC38961.1| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 770

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 134/548 (24%), Positives = 230/548 (41%), Gaps = 51/548 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   
Sbjct: 67  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLR 126

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 127 AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAE 186

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 187 REIEQAYDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGAT 246

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 247 PVRKTSTHHFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 304

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 305 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKD 364

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 365 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWL 424

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 425 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----S 480

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
            ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N  
Sbjct: 481 ATNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAV 540

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGF 497
                  V++E  R L++ L+  +P++A  +   L +     AD N+   S +Q ++   
Sbjct: 541 ALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSS-EQPIRAYQ 599

Query: 498 MLHKTFDP 505
            L    DP
Sbjct: 600 HLMTRVDP 607


>gi|326511433|dbj|BAJ87730.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 798

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 115/559 (20%), Positives = 226/559 (40%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 15  GRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+     + C+ ++ K+ +   + +
Sbjct: 75  ALEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTE 134

Query: 122 GCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    E +  D              E  +G   +  +   NP + ++ +     
Sbjct: 135 NTMQQLYCDTCERFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 194

Query: 165 --YFFRLSAYQDKLLSYYESHPEF---------ILPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L                  +          +++K GLK   ++R  
Sbjct: 195 NAPRIRDTDHLFLELPLLSDKLVNYINNTSVAGMWSQNAIQATNAWLKEGLKQRCITRD- 253

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 254 LKWGVPVPHEKYKDKVFYVWFDAPIGYISITASYTPDWEKWWKD-PDNVELFQFMGKDNV 312

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +     +  +  
Sbjct: 313 PFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKVTNIPSEVW 372

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +IP   
Sbjct: 373 RYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIIPDAP 432

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                    ++    ++ +++  E M+   + + L   +++ S+ + Y    + W L K 
Sbjct: 433 NAESHTLTSALAEKTNKWVEQYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRLYKE 492

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF----------QS 488
           +P   + V+  +V V+  LA LL+ F+P  + ++   L +  DE+  F          + 
Sbjct: 493 DPAACAIVMKTSVGVVYLLACLLEPFMPSFSREVLRQLNMSPDEDLSFCDDKGETAKAKR 552

Query: 489 LDQRLKPGFMLHKTFDPIF 507
               +  G  + K   P+F
Sbjct: 553 PWDFVSAGHKIGKPV-PLF 570


>gi|186476942|ref|YP_001858412.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193401|gb|ACC71366.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 726

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 134/537 (24%), Positives = 221/537 (41%), Gaps = 43/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 21  KARRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPIMLK 80

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  + +      ++  +   G I  
Sbjct: 81  AEQEGITPKQLIDRVWQEHKRDFDNFGISFDNYYSTDSEENRVLSESIYTALQAAGLIEA 140

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G + +   + + P + +          
Sbjct: 141 RDIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYQPTELINPYSVVSGAT 200

Query: 163 ------EGYFFRLSAYQD-KLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTF 214
                   YFFRLS  +    L  +           +  E +    ++ L D  +SR   
Sbjct: 201 PVKKTSTHYFFRLSDPRCENFLRGWVGGLAQQEATNKMREWLGDAGEAKLADWDISRDAP 260

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDIL 268
            +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL
Sbjct: 261 YFGFEIPGAPGKYFYVWLDAPVGYYASLRNLAEKRGLDFDAWTKKGATTEQYHFIGKDIL 320

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VIE  +  + LRY
Sbjct: 321 YFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITANSVIETGMNPEWLRY 380

Query: 328 FLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +  +  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +  
Sbjct: 381 YFAAKLNSTMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----SAM 436

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRA 444
              +L+     + +I  + + +   RAL   + L   V+ Y D  KPW+  K   N    
Sbjct: 437 QHPLLASLRGAIAQIAAHYEARDYGRALRLTMELADSVNAYVDTAKPWDQAKDPANAVAL 496

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                V++E  R L++ L+  +PK+A      L +  E   +   D  L+    ++ 
Sbjct: 497 HETCSVSLEAFRLLSLALKPVLPKVAEAAEAFLGI--EPLKWTDADVPLRSTHAINA 551


>gi|194745961|ref|XP_001955453.1| GF18774 [Drosophila ananassae]
 gi|190628490|gb|EDV44014.1| GF18774 [Drosophila ananassae]
          Length = 568

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 167/501 (33%), Positives = 264/501 (52%), Gaps = 21/501 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQNA 65
           +++T I Y NA PHIGH Y  +IAD   R+ RL   +  V   TGTDEHG KI +AA   
Sbjct: 21  FVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLKYPERKVRLCTGTDEHGTKIQQAAALH 80

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V    + DQ S  +R++    +I  DDFIRTTE+RH       W+ ++ +G IY   YS
Sbjct: 81  KVPVATYCDQISERYREVFQNANILQDDFIRTTEERHKRAVAHFWRTLNSRGHIYSAAYS 140

Query: 126 GWYSLRDEAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           GWY + DE +  D ++        +Y     +PV+W EE  Y FRLS +QD ++ +    
Sbjct: 141 GWYCVSDETFLTDSQLKLDEATGARYSLESGHPVEWTEETNYMFRLSKFQDDVIHWV-KQ 199

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              I P +    ++  +   L D+S+SR      W I +PDD    +YVW+DAL NYL+ 
Sbjct: 200 EARIRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDSSQTVYVWLDALVNYLSA 259

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY D    +    WP    +IGKDIL+FH IYWPAFL++A L  P +++ H      G+
Sbjct: 260 LGYPDEEYSAF---WPPAQQIIGKDILKFHGIYWPAFLIAAGLQPPGQLYVHSHWTVDGQ 316

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV++P++  E+  ++ LRYFL+RE     DG Y      + +N++LA+ +GNL
Sbjct: 317 KMSKSKQNVVNPVQAAEQYTMEGLRYFLLREGVAHSDGNYSHVKALRILNSELADTLGNL 376

Query: 362 VSRSVSMILKDYDGMIPTPGAF-------TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           +SR+ +  L                     ++ + +     ++ +   ++ ++   H   
Sbjct: 377 LSRACAKTLNPRQIYPSAQAEHLAEILGSLDAAKRLQESLLQLSERCAQHYESNHFHLVA 436

Query: 415 AQVISLVSEVDRYFDAQKPWELKK----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              ++ +   + +F+  +PWELKK    +N  R  T++ +T++ +R   I+LQ  +P+LA
Sbjct: 437 DTAMATLHAANNFFETSRPWELKKGAAGSNEPRLETIIAMTMDALRLCGIVLQPIIPQLA 496

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            ++ D L V    R +  L +
Sbjct: 497 TRLLDKLSVPATQRGWNYLAE 517


>gi|257092590|ref|YP_003166231.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045114|gb|ACV34302.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 701

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 124/536 (23%), Positives = 220/536 (41%), Gaps = 45/536 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G +  +    D HG  I   A+ 
Sbjct: 3   RKILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMRGHECWYVCADDTHGTPIMLRAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++             I +D++  T           ++ ++   G I     
Sbjct: 63  EGITPETLIERVQGEHARDFSGFHIGFDNYYTTHSDETRRCANEIYARLQAAGLIETRVI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPV--------QW 159
             +Y    + +  D  +         + Q+                 NP         + 
Sbjct: 123 EQYYDPLKQMFLPDRFIKGECPKCGAHDQYGDNCESCGAAYTANDLKNPYSAVSGARPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
            + E YFF+LS  + +      +  E  L  E  N++  +     ++ L D  +SR    
Sbjct: 183 RQSEHYFFKLSDPRCQTFLRRWTQAEGRLQSEAANKLQEWLGAEGENHLTDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y+     L +  G     +          H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYMGAFRNLCDRQGLDFDEYWRPGSATELYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FHA++WPA L  A    P KVF+HGF+   G K+SKS G  I     + + +  + LRY+
Sbjct: 303 FHALFWPAELEHAGYRTPSKVFAHGFLTVDGAKMSKSRGTFITAESYLAQGLDPEWLRYY 362

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  +  +D   + D    RVN+D+     N+ SRS   ++K + G + T      + 
Sbjct: 363 YAAKLSSSMEDIDLNLDDFIARVNSDMVGKFVNIASRSAGFVVKHFAGQLCTCDESLPAI 422

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAS 445
           ++I          I ++ + +   +A+ ++++L    ++Y D+ KPWEL +         
Sbjct: 423 QAIRDR----RALIADHYEARDFGKAIREIMALTDLANQYVDSVKPWELARQAGRESELQ 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                 + + R  AILL+  +P L+ +    L VA     ++     L  G  ++ 
Sbjct: 479 AACSNALNLFRLFAILLKPVLPALSARAEAFLNVAP--FVWEDSATVLAAGHAINA 532


>gi|76810283|ref|YP_332622.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254260859|ref|ZP_04951913.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|123599931|sp|Q3JUY1|SYM_BURP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76579736|gb|ABA49211.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254219548|gb|EET08932.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 725

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSPEQPV 543


>gi|117925153|ref|YP_865770.1| methionyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|187647733|sp|A0L8S1|SYM_MAGSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|117608909|gb|ABK44364.1| methionyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 686

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 136/524 (25%), Positives = 228/524 (43%), Gaps = 41/524 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RFH+L G + ++    D HG  I   AQ 
Sbjct: 2   RRILVTSALPYANGHIHLGHLVEYIQTDIWVRFHKLRGEECIYMCADDTHGTPIMLRAQK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V+Q  +          + +D++  T  + +      ++ K  D G I     
Sbjct: 62  EGITPEQLVNQMHKEHAQDFAAFFVQFDEYYTTNSEENRLLSEEIYLKNRDGGHIEVDTI 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWME------------ 161
              Y   D  +  D  +             G   +  +A + P +  E            
Sbjct: 122 QQAYCEHDAMFLPDRFIRGTCPHCGAVDQYGDSCEVCSATYRPTELKEAKCAVCGSQPVE 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E YFF+L  + D L  + +S         + NE     + GLK   +SR    +G +
Sbjct: 182 KSSEHYFFKLQDFSDYLKEWIQSGTLQPEMAAKLNEWF---EQGLKHWDISRDGPYFGFE 238

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IPD P    YVW+DA T Y+ TT  +      +   +W  D      H IGKDIL FH +
Sbjct: 239 IPDAPGKYFYVWLDAPTGYMATTWHHCKKQGINFDDYWRRDDKAEVYHFIGKDILYFHTL 298

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  +    P  VF+HGF+   G+K+SKS G  I+  +    +  + LRY+   ++
Sbjct: 299 FWPAMLHGSGFRTPTAVFAHGFLTVNGQKMSKSRGTFINARQYSAFLNPEYLRYYYAAKL 358

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + D   +RVN+DL   + NL SR+   I+K ++G +         D+ +  
Sbjct: 359 TSRVDDLDLNLDDFVQRVNSDLVGKVVNLASRTAGFIVKRFEGQLCADY---PEDDGLFQ 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYV 450
              +  +EI    + +   +A+  ++ L    ++Y +   PW L K      R   V  V
Sbjct: 416 QFHQAGEEIAALYEKREFAKAMQAIMRLADSANQYVENHAPWVLAKDPLQSQRLQQVCSV 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           T+ + R L I L+  +P ++N++ + LF A +   +Q     L+
Sbjct: 476 TLNLFRTLMIFLKPVLPYMSNQV-EQLFNAPQPFVWQDTAAPLQ 518


>gi|325203164|gb|ADY98617.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 685

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 130/548 (23%), Positives = 226/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHTRDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +PK+A      L +  E   + +  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL--GKHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|317504517|ref|ZP_07962493.1| methionine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664378|gb|EFV04069.1| methionine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 687

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 128/543 (23%), Positives = 241/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M++++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEQKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQEVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  ++      IS+D + RTT K H       +KK+ D G
Sbjct: 61  ITLRAKKEGITPQDVCDRYHKLIKESFKEFGISFDVYSRTTSKTHSLMASDFFKKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW------- 159
            + +     +Y    + +  D  +             G   +   +  +P++        
Sbjct: 121 KLVEKESEQYYDEEAKQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPHSTI 180

Query: 160 -------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ  L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSKPVIRKTKNWYLPLNEYQTWLKKWILDEHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD----LHV 262
             DWGI +P       ++YVW DA   Y++ T  L + + +K     K+W       +H 
Sbjct: 240 -LDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDKEPNKFGSWEKWWKEPDTRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P          LP  V ++ F+  + +KIS S    +   E ++E+ 
Sbjct: 299 IGKDNIVFHCIIFPTMLKAHGGYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLKELP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYWAGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D + L     V  ++   +       A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELQDVDRATLEEFEGVKDKLEAYLDAFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  LAI  + F+P  + K+  ++ +   +         LK G  L
Sbjct: 479 DPKRVETILYISLQLVANLAIAFEPFLPFSSEKLRKLINMESFDWNELGSTNLLKAGHQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|167901747|ref|ZP_02488952.1| methionyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 725

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 130/533 (24%), Positives = 222/533 (41%), Gaps = 47/533 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  V++E  R L++ L+  +P++A  +   L +A     +      L P
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSP 539


>gi|167718572|ref|ZP_02401808.1| methionyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167893288|ref|ZP_02480690.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|237811322|ref|YP_002895773.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237504542|gb|ACQ96860.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 725

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 130/533 (24%), Positives = 222/533 (41%), Gaps = 47/533 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  V++E  R L++ L+  +P++A  +   L +A     +      L P
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSP 539


>gi|300703367|ref|YP_003744969.1| methionyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071030|emb|CBJ42339.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum CFBP2957]
          Length = 688

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 131/531 (24%), Positives = 216/531 (40%), Gaps = 46/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ER ++ +++A+ Y N   HIGH  E I  D+  RF R+ G ++ +    D HG  +  
Sbjct: 1   MSER-RILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHEIYYVGADDTHGTPVML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +++     +   D   +S+D++  T    + + C  ++ K+ +   I 
Sbjct: 60  RAEKEGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLKEADLID 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y    E +  D  +             G   +   A + P             
Sbjct: 120 VREVEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGA 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRK 212
                  E YFF+LS  + +         +   P             G   L D  +SR 
Sbjct: 180 TPVRKSSEHYFFKLSDPRCETFLREWVA-DLAQPEATNKMREWLGDEGESTLSDWDISRD 238

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 239 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKD 298

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 299 ILYFHTLFWPAMLQFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 358

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D    RVN+DL     N+ SRS   ++K ++G +       
Sbjct: 359 RYYFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVNDAALGN 418

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--D 442
                ++        +I +  + +   +AL  V+ L   V+ Y D +KPW+L K     D
Sbjct: 419 P----LMVQLREAAPQIADLYEKREYSKALRAVMELADAVNAYVDTEKPWDLAKDEAQRD 474

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +      V +E  R LA+ L+  +P    +I   L V  E   ++++D +L
Sbjct: 475 KLHAACSVALEAFRLLAVYLKPILPSTVARIEAFLNV--EPLNWRAIDAQL 523


>gi|304414294|ref|ZP_07395662.1| Methionyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283508|gb|EFL91904.1| Methionyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 557

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 134/543 (24%), Positives = 239/543 (44%), Gaps = 51/543 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADIWVRYQRMRGNEVYFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + + ++  +       ISYD++  +  + + +  ++++ ++ +KG I K   
Sbjct: 66  LGLKPEQMIAEMNQEHQQDFAGFSISYDNYHSSHSEENLELSKLIYCRLKEKGYIKKRII 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
           S  Y    E + +D  V             G + +   A ++P++ M             
Sbjct: 126 SQLYDPEKEMFLSDRFVKGSCPKCQSPDQYGDNCEACGATYSPIELMDPKSTLSGAVPLI 185

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF L A+ D L S+  S     L  +  N++  +  SGL+   ++R    +G +
Sbjct: 186 RESEHFFFDLPAFSDMLQSWIHSGT---LQEQVANKMQEWFTSGLQQWDITRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IPD P    YVW+DA   Y++    L +         FW         H  GKDI+ FH+
Sbjct: 243 IPDAPGKYFYVWLDAPIGYMSAFKNLCSKRSDLDFNAFWCEGATTDLYHFTGKDIVYFHS 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  +F HG++   G K+SKS G  I     +     D LRY+   +
Sbjct: 303 LFWPAMLDGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTYLNYFDPDCLRYYYAAK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   +     +RVN D+ N + NL +R+ S I K + G +    A   +D ++ 
Sbjct: 363 LSSRIDDIDLNLADFVQRVNTDVVNKLVNLAARNASFINKKFAGKL----AHQLADAALY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
              +     I +   N+   +A+ ++++L    +RY D Q PW + K          +  
Sbjct: 419 KTFTDAAVTIAQAYDNRESGKAIREIMALADLANRYVDEQAPWVVAKDASRTTDLQMICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           + + + R L I L+  +P L+ +    L   +  +   F  L+ ++         F+ +F
Sbjct: 479 MGINLFRVLMIYLKPVMPSLSTRSQAFLNSELDWDKLAFPLLNHQI-------NKFNALF 531

Query: 508 PRF 510
            R 
Sbjct: 532 NRI 534


>gi|78184713|ref|YP_377148.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169007|gb|ABB26104.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 514

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 181/511 (35%), Positives = 269/511 (52%), Gaps = 12/511 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++T + Y N +PH+G AY  +  D LARF RL   DV+F TG DEHGQKI + A+   
Sbjct: 3   YTLTTPLYYVNDKPHLGSAYTTLACDALARFKRLTQGDVVFITGVDEHGQKIQRTAELNN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           ++  V  D+ S  ++D+    +IS D F+RTT  RH       ++++   GDI  G  +G
Sbjct: 63  ISPIVHCDKISERYQDLWSRWNISQDRFVRTTNPRHLQLVEQFYERVKASGDIVTGRQTG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E Y +D +                ++W +EE  FFRLS YQ   +    ++ +F
Sbjct: 123 WYCVGCEEYKDDPDDSVDPQ---CPIHQKTLEWRDEENLFFRLSRYQR-DIEELIANDDF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P  RR EV +FV  GL+D S+SR    WG+ +P    +  YVW DAL  YLT      
Sbjct: 179 IAPASRRQEVRNFVARGLRDFSISRVNVSWGLPVPGHSGHTFYVWFDALLGYLTALLDDG 238

Query: 247 NPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                +      WPA +HVIGKDILRFHA++WPA L+SA LP+PK+VF HGF+  +G+K+
Sbjct: 239 GSVDLERLADCGWPASVHVIGKDILRFHAVFWPAMLISAGLPVPKRVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++E+ G DA+R++L+R+I  G DG + +      VN DLAN IGNL++
Sbjct: 299 GKSLGNVLDPELLLEKCGADAVRWYLLRDIQFGDDGDFQQQRFSDLVNNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +D  +P     +  +  +       ++ +  +M       A   ++ L   
Sbjct: 359 RTSSMARKWFDNSVPPHTIDSHKNHPLALKAQATVEIVMSSMPELGFKSASEAILQLAIA 418

Query: 424 VDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDIL--FV 479
            + + +   PW   K   +  S     YV +E  R + +LL   +P L+++I D L   +
Sbjct: 419 ANGHLNDTAPWSRMKQPGEEHSVANDLYVVLESTRIVGLLLAPLLPDLSSRILDQLDCSL 478

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             E+   Q     L  G  L K   P+  R 
Sbjct: 479 DPEHWMDQLQWGGLTSGSELPKPV-PVMARL 508


>gi|313205891|ref|YP_004045068.1| methionyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445207|gb|ADQ81562.1| methionyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022203|gb|EFT35231.1| methionyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336669|gb|ADZ12943.1| EMAP domain [Riemerella anatipestifer RA-GD]
          Length = 677

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 125/539 (23%), Positives = 235/539 (43%), Gaps = 44/539 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ER+   I+ A+ Y N   HIGH A   I ADV ARF R  G +V F  G+DEHG  I 
Sbjct: 1   MAERK--LITAALPYANGPVHIGHLAGVYIPADVYARFQRRTGKEVAFICGSDEHGIPIT 58

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +   + L IS+D++ RTT  +H++T    + K+ + G  
Sbjct: 59  IRAKKEGVTPQDIVDKYHLIIKKSFEDLGISFDEYSRTTSAKHYETASEFFLKMYENGKF 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------ 162
            +     +Y  +   +  D  +             G   +   +  +P + +        
Sbjct: 119 TEEVSEQFYDEQAGEFLADRYIVGTCPKCSNNNAYGDQCEKCGSTLSPTELLNPKSMLSG 178

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + ++  L+ Y+  L  +     +         +V S++  GLK  +++R   
Sbjct: 179 NSPVLKPTKNWYLPLNEYEGFLNQWIIEGHQHDWKPNVYGQVKSWLNEGLKPRAMTRD-L 237

Query: 215 DWGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           +WG+ +  PD    ++YVW DA   Y++ T      +    K +        +H IGKD 
Sbjct: 238 NWGVPVPLPDAEGKVLYVWFDAPIGYISFTKEWAEKNNKDWKDYWQSENSDLVHFIGKDN 297

Query: 268 LRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+ +    +  +P  V +  F+  + +KIS S    +   E + +     D 
Sbjct: 298 IVFHCIIFPSMMKAHGDYIMPNNVPAFEFLNLENDKISTSRNWAVWAHEYVADFPGQQDV 357

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L+      KD  +     + + N++L   +GN ++R   +  K Y+G +P      
Sbjct: 358 LRYALLSSAPETKDNNFTWKEFQTKNNSELVGILGNFINRVAVLTHKYYNGRVPKGNTNA 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
                 L   ++   EI++ ++      AL+ +++L    ++Y   ++PW+  KT+  + 
Sbjct: 418 TE----LEEINKAATEIKDYLEKFEFRNALSALMNLARFGNQYLQTEEPWKTIKTDEAKT 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-FQSLDQRLKPGFMLHKT 502
           +  L++  ++   LA L + F+P  + K+ ++      N    ++    L  G  +++ 
Sbjct: 474 ANTLFIGTQIAIALAQLSEPFMPFSSEKLLNMFNTKLCNWSELENKKVLLAEGHQINEP 532


>gi|312795361|ref|YP_004028283.1| methionyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167136|emb|CBW74139.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Burkholderia rhizoxinica
           HKI 454]
          Length = 728

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 225/544 (41%), Gaps = 49/544 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   HIGH  E I  D+  R  R+ G +V +    D HG  I   AQ+
Sbjct: 35  RRMLVTSALPYANGPIHIGHLVEYIQTDIWVRAMRMHGHEVYYVGADDTHGTPIMLRAQS 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++  +  +   D   IS+D++  T    +      ++  + D G I     
Sbjct: 95  EGITPRQLIERVWQEHKRDFDHFGISFDNYYSTDSDENRVLSETIFTALHDAGLIAARDI 154

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y    E +  D  +             G   +   + + P + ++            
Sbjct: 155 EQAYDPVKEMFLPDRFIKGECPKCSAKDQYGDSCEVCGSTYQPTELVKPYSVLSGATPVK 214

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
                YFF+LS    +  ++       +   E  N++  +      + L D  +SR    
Sbjct: 215 KTSTHYFFKLSD--PRCETFLRGWVSQLAQQEATNKLREWLGEDGDATLADWDISRDAPY 272

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G   + W          H IGKDIL 
Sbjct: 273 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLNFEEWVRPGSTTEQYHFIGKDILY 332

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I+    +   +    LRY+
Sbjct: 333 FHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGTKMSKSRGTFINANSYITTGLDPQWLRYY 392

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           L  +  +  +D   + D  + RVN+DL     N+ SR+   ++K +D  +      +  +
Sbjct: 393 LAAKLNSTMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLVKRFDARVQD----SAMN 448

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
             +L      +  I  + +++   RAL Q + L   V+ Y DA KPWE  K   N     
Sbjct: 449 HPLLVRLRDAIPTIAAHYESREYSRALRQTMELADAVNAYVDAAKPWEQAKDPANAVALH 508

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD----QRLKPGFMLHK 501
               V++E  R L + L+  +PKLA  +   L +        S+     + ++P   L +
Sbjct: 509 ETCSVSLEAFRLLTLALKPVLPKLAESVETFLSIEPLKWADVSVPLSSARPIRPYQHLMR 568

Query: 502 TFDP 505
             DP
Sbjct: 569 RVDP 572


>gi|262368863|ref|ZP_06062192.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316541|gb|EEY97579.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 685

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 129/541 (23%), Positives = 224/541 (41%), Gaps = 46/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + ++ A+ Y N   H+GH    I AD+  R  R  G DV +    D HG  I   A+ 
Sbjct: 2   RNILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW-----------KKI 113
            G++ +  +    +      D   + +D +  T    +      ++           + +
Sbjct: 62  NGISPEDQIANVQKEHIRDFDGFGVHFDHYDSTHSDENRSRASEIYVKNREAGNIAIRPV 121

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE---------- 163
           +   D  KG +     ++        E   G   +     +N  + +  +          
Sbjct: 122 NQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDACEVCGTTYNATELLNPKSTLSGATPVE 181

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFF+L  + + L  +        LP+   N++  + ++GL D  +SR    +G +
Sbjct: 182 KSSDHYFFKLPNFSEYLQKWTRDQGR--LPVSIANKLDEWFEAGLSDWDISRDAPYFGFE 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD-----LHVIGKDILRFH 271
           IPD P    YVW+DA   Y+++         PD S   FW  D      H IGKDI+ FH
Sbjct: 240 IPDAPNKYFYVWVDAPIGYMSSFENYIKAKRPDLSFDDFWKKDSDKEVYHFIGKDIVYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  AN   P  +F +GF+   G+K+SKS G  I     +E +  + LRY+   
Sbjct: 300 ALFWPAMLEGANYRTPSGLFVNGFLTVNGQKMSKSRGTFIKAETYLEHLNPEYLRYYFAS 359

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D   + D   ++VN+DL   + N+ SR    I   +D  +    A  E    +
Sbjct: 360 KLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINTKFDNKLSATCAEPE----L 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVL 448
           +         I +  + +    A+ ++++L  + ++Y D +KPW L K   +      V 
Sbjct: 416 VQSFIDAGDSIAKAYEAREFSAAIREIMALADKANQYIDEKKPWALAKVEGEEQQVHNVC 475

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V + + RQLA+ L   +P LA ++   L +  +   F S    L         F P+  
Sbjct: 476 SVGINLFRQLAVYLAPVLPTLAAQVQAFLKL--DRFDFASAQTALV--DHEIALFQPLMQ 531

Query: 509 R 509
           R
Sbjct: 532 R 532


>gi|167569200|ref|ZP_02362074.1| methionyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 718

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 138/547 (25%), Positives = 227/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  DV  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDVWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT K  +++  R  +   D   +S+D+F  T    +      ++  + D G I K
Sbjct: 75  AEQEGVTPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAK 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGIDFDAWIKKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLLATLRDAIPQIAAHYEAREYGRALRQTMELADEVNGYVDTAKPWELAKDPANAA 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     VA     +     S +Q ++    
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGVAPLVWADASKPLSSEQPIRAYQH 548

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 549 LMTRVDP 555


>gi|209881209|ref|XP_002142043.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209557649|gb|EEA07694.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 556

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 186/509 (36%), Positives = 274/509 (53%), Gaps = 12/509 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y++TAI Y N  PHIGHAYE+I++D + R  R+ G +  F TGTDEHG K A  A N
Sbjct: 30  KPFYLTTAINYINGVPHIGHAYEIIVSDAIVRIARIFGYNTRFMTGTDEHGLKNATVASN 89

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +T K   D N   F++M   L+IS D FIRTT+K H+  C  +WK+  D GDIY G Y
Sbjct: 90  NNMTPKELCDLNVIKFKEMNKKLNISTDRFIRTTDKDHYKACEEIWKRCMDSGDIYLGIY 149

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +GWYS+++E +  + E          +    P+  M+E  YFFRL+ Y   + ++   +P
Sbjct: 150 TGWYSIKEETFVTELEAKMTN--YLDSITGTPLVKMDEPSYFFRLTKYLPSVHAHILENP 207

Query: 185 EFILPIERRNEVISFV--KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            FI P   R+ ++S +       DLS+SR TF WG+ +P+DPQ++MYVW DALTNY+T  
Sbjct: 208 NFIQPEILRDNILSRLDNMQNPADLSISRITFSWGVPVPNDPQHVMYVWFDALTNYITGL 267

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGE 301
            + +  +     +W   +H++GKDI  FH I WPA L+SAN+PLPK +F HGF+    G+
Sbjct: 268 NWPNEDNELWKTYWSNTIHIVGKDIAWFHCIIWPAMLMSANIPLPKTIFGHGFVTASDGK 327

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV+DP+E IE VG D  RY++ RE   G D  ++   +    N +LA+  GNL
Sbjct: 328 KMSKSLENVVDPLEQIELVGTDTFRYYICREGKFGYDFKFNTTSIVDYHNGELADSFGNL 387

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           VSR+ ++  K   G++P     ++  +        VL+    +     +       +   
Sbjct: 388 VSRTTNLAHKFCGGIVPAKLCSSKISKPFCPK--GVLERYGYSWNKYRLEECAQISMHTC 445

Query: 422 SEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            EV+++     PW      T+ DR   ++ + +E I  LA L+  F P    +I   L  
Sbjct: 446 REVNKFLTDNAPWNKSNDLTDEDRIE-IIRIVLESIYYLAHLMAPFTPNACEQISSRLGT 504

Query: 480 ADENRCFQSLD-QRLKPGFMLHKTFDPIF 507
                     D   LK G  L    +P+F
Sbjct: 505 PLTIIPLLDTDFNNLKQGTPLT-IGNPLF 532


>gi|170733778|ref|YP_001765725.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|226710897|sp|B1JWS3|SYM_BURCC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169817020|gb|ACA91603.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 716

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 132/544 (24%), Positives = 227/544 (41%), Gaps = 48/544 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+ 
Sbjct: 18  RQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEK 77

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +   
Sbjct: 78  EGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREI 137

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y    E +  D  +             G   +   + + P + +             
Sbjct: 138 EQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVR 197

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
              + YFFRLS    +  S+       +   E  N++  +     +S L D  +SR    
Sbjct: 198 KTSKHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRDAPY 255

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL 
Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 315

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + LRY+
Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
             +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N     
Sbjct: 432 HPLVAKLRDAIAQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
               V++E  R L++ L+  +P++A  +     +A     +    + L     + K +  
Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAEAVEAFFGIAP--LAWADAAKPLSSAQPI-KAYQH 548

Query: 506 IFPR 509
           +  R
Sbjct: 549 LMTR 552


>gi|121598252|ref|YP_993613.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385371|ref|YP_001028926.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450764|ref|YP_001081161.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167003048|ref|ZP_02268838.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|238563610|ref|ZP_00438586.2| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254177483|ref|ZP_04884138.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254199383|ref|ZP_04905749.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254205698|ref|ZP_04912050.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254357859|ref|ZP_04974132.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|121227062|gb|ABM49580.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293391|gb|ABN02660.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126243634|gb|ABO06727.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147748979|gb|EDK56053.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753141|gb|EDK60206.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148026986|gb|EDK85007.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698522|gb|EDP88492.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238520348|gb|EEP83809.1| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243061352|gb|EES43538.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 717

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 421 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSPEQPV 535


>gi|255534689|ref|YP_003095060.1| methionyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340885|gb|ACU06998.1| Methionyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 677

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 135/549 (24%), Positives = 249/549 (45%), Gaps = 49/549 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ER+   I+ A+ Y N   HIGH A   I ADV ARF R  G DV F  G+DEHG  I 
Sbjct: 1   MSERK--MITAALPYANGPVHIGHLAGVYIPADVYARFQRRLGRDVAFICGSDEHGIPIT 58

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  VD+     +     L IS+D++ RTT K+H++  +  +  + +KG  
Sbjct: 59  IRAKKEGVTPQDIVDKYHEIIKKSFADLGISFDEYSRTTSKKHYEVSQDFFATLFNKGKF 118

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +     ++  +   +  D  +             G   +   +  +P + +        
Sbjct: 119 AEEVSEQYFDEQAGEFLADRYIVGTCPNCSNDNAYGDQCEKCGSTLSPSELINPKSMLSG 178

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L+ Y++ L  +     +         +V S++  GLK  +++R   
Sbjct: 179 NVPILKETKNWYLPLNEYENFLNEWIIEGHKNDWKPNVYGQVKSWLTDGLKSRAMTRD-L 237

Query: 215 DWGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           +WG+ +  PD    ++YVW DA   Y++ T      +G   K +  +     +H IGKD 
Sbjct: 238 NWGVPVPLPDAEGKVLYVWFDAPIGYISFTQEWAEKNGKDWKDYWQNENSDLVHFIGKDN 297

Query: 268 LRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +PA +    +  +P  V +  F+  + +KIS S    +   E +EE     D 
Sbjct: 298 IVFHCIIFPAMMKAHGDYKMPTNVPAFEFLNLENDKISTSRNWAVWAHEYVEEFPGQQDV 357

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L+      KD  +     + + N++L    GN ++R   +I K YDG++P      
Sbjct: 358 LRYALLSSAPETKDNNFTWKDFQTKNNSELVGIFGNFINRVAVLIHKYYDGIVPQGNEQA 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
                 L   S+   EI   ++      AL+ +++L    +++   ++PW+  K NP++A
Sbjct: 418 PE----LHEISKAASEIESYLERYEFRNALSSMMNLARFGNQFLQTEEPWKTIKDNPEKA 473

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLHK 501
           +  L++  ++   LA + + F+P  ++K+  +  V+     ++ +  +   +K G  ++ 
Sbjct: 474 ANSLFIGAQIAVGLAQICEPFLPFSSDKLLKMFNVS--QLSWKEIANQQILIKTGHQIN- 530

Query: 502 TFDPIFPRF 510
           T + +F + 
Sbjct: 531 TAELLFSKI 539


>gi|53718640|ref|YP_107626.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126454059|ref|YP_001065337.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167844753|ref|ZP_02470261.1| methionyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167918019|ref|ZP_02505110.1| methionyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|254298272|ref|ZP_04965724.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|68565972|sp|Q63W90|SYM_BURPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187647709|sp|A3NSL6|SYM_BURP0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52209054|emb|CAH34994.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126227701|gb|ABN91241.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157808199|gb|EDO85369.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 725

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGMPLSPEQPV 543


>gi|167823191|ref|ZP_02454662.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 725

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 130/533 (24%), Positives = 222/533 (41%), Gaps = 47/533 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  V++E  R L++ L+  +P++A  +   L +A     +      L P
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSP 539


>gi|309797413|ref|ZP_07691806.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|308119037|gb|EFO56299.1| methionyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 655

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 131/525 (24%), Positives = 233/525 (44%), Gaps = 48/525 (9%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH  E I ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +
Sbjct: 1   LGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQ 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 +ISYD++  T  + +     +++ ++ + G I     S  Y      +  D  V
Sbjct: 61  TDFAGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFV 120

Query: 142 -----------YKGADGQYYNAQHNPVQWMEE--------------EGYFFRLSAYQDKL 176
                        G + +   A ++P + +E               E +FF L ++ + L
Sbjct: 121 KGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEML 180

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            ++  S     L  +  N++  + +SGL+   +SR    +G +IP+ P    YVW+DA  
Sbjct: 181 QAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPI 237

Query: 237 NYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK 288
            Y+ +   L +  G      ++W  D      H IGKDI+ FH+++WPA L  +N   P 
Sbjct: 238 GYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPT 297

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLK 347
            +F HG++   G K+SKS G  I     +     D+LRY+   +++    D   + +   
Sbjct: 298 NLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFV 357

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +RVNAD+ N + NL SR+   I K +DG++    A   +D  +    +   + I E  ++
Sbjct: 358 QRVNADIVNKVVNLASRNAGFINKRFDGVL----AGELADPQLYKTFTDAAEVIGEAWES 413

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAF 465
           +   +A+ ++++L    +RY D Q PW + K          +  + + + R L   L+  
Sbjct: 414 REFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPV 473

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +PKL  +    L        +  + Q L  G  ++  F  ++ R 
Sbjct: 474 LPKLTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYNRI 513


>gi|304382941|ref|ZP_07365423.1| methionine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335966|gb|EFM02214.1| methionine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 681

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 239/539 (44%), Gaps = 41/539 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M++++  +  I+ A+ Y N   HIGH A   I +D+ AR+ RL G +V F  G+DEHG  
Sbjct: 1   MEDKKYKRTTITAALPYANGGVHIGHLAGVYIPSDIYARYLRLKGEEVAFICGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +  VD+     +   +   IS+D + RTT + H+      ++K+ D G
Sbjct: 61  ITIRARKEGITPQDVVDRYHTLIKKSFEDFGISFDIYSRTTSETHNRFASDFFRKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ-------- 158
            + +     +Y      +  D  +             G   +   +  +P +        
Sbjct: 121 KLMEKTSRQYYDEEAHQFLADRYITGECPHCHHQGAYGDQCEKCGSDLDPTELINPKSTI 180

Query: 159 ------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                   + + ++  L+ YQ+  L  +              +  S++   L+  +++R 
Sbjct: 181 SGSKPVMKDTKNWYLPLNDYQEW-LRTWILEDHKEWRSNVYGQCKSWLDLDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDIL 268
             DWGI +P +     ++YVW DA   Y++ T  L      K    P    +H IGKD +
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELYPDSWEKWWKDPETRLIHFIGKDNI 298

Query: 269 RFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDAL 325
            FH I +P          LP+ V ++ F+  + +KIS S    +   E +EE     D L
Sbjct: 299 VFHCIVFPVMLKAHGGYILPENVPANEFLNLEDDKISTSKNWAVWLHEYLEEFPGKQDVL 358

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY L       KD  +     ++R N +L    GN V+R++ +  K ++G++P  G  T+
Sbjct: 359 RYVLTANAPETKDNNFTWKDFQERNNNELVAVYGNFVNRALQLTQKYFNGVVPACGELTD 418

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   L     V Q++   +       A  + ++L    ++Y    +PW++ K +  R  
Sbjct: 419 IDCQTLDELKTVKQKVEGLLNVFKFRDAQKEAMNLARIGNKYITDCEPWKVAKDDMKRVE 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHKT 502
           T+L+V+++++  L+I+ + F+P  +  + ++L    E+  +  L ++  LK G  L   
Sbjct: 479 TILHVSLQLVANLSIVFEPFLPFSSKTLREMLH--AEHFGWDKLGEKDLLKAGHQLGTP 535


>gi|19115319|ref|NP_594407.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|74675941|sp|O14000|SYMM_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|2388946|emb|CAB11680.1| mitochondrial methionine-tRNA ligase [Schizosaccharomyces pombe]
          Length = 539

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 174/507 (34%), Positives = 269/507 (53%), Gaps = 15/507 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAK 60
             ++  +++T I Y NA PH+GH Y +++ D +ARF  L     V+ +TGTDEHG K+  
Sbjct: 16  SSKKPYFLTTPIFYVNAAPHLGHLYSLVLTDAIARFQNLKPDVSVISSTGTDEHGLKVQT 75

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  GV+     D+NS+ F D+A   +  +  FIRTT  +H  + +  WK I   G I 
Sbjct: 76  VAQTEGVSPLQLCDRNSKRFADLAVAANTKFTHFIRTTNPKHQASVQEFWKTIQKAGMIS 135

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADG------QYYNAQHNPVQWMEEEGYFFRLSAYQD 174
              + GWY + DE +Y +  + K  D       +        VQW  E  Y F LS +Q 
Sbjct: 136 FERHEGWYCVSDETFYPESAIQKVVDPATKQEKRVSMETGKEVQWSSEMNYHFLLSKFQS 195

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
           +L+ +Y  +P F+ P     +V+  +K+G+ DLS+SR      WGI +P + Q  +YVW+
Sbjct: 196 RLIEHYNKNPNFVQPSIFHTQVLEELKTGISDLSISRPKQRLSWGIPVPGNSQQTIYVWL 255

Query: 233 DALTNYLTTTGYLD-NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           DAL NY++  GY   N   S +  WPA++HVIGKDI+RFH IYWPAFL++A LPLP+K+ 
Sbjct: 256 DALINYISVIGYPWLNEKSSLSAGWPANMHVIGKDIIRFHCIYWPAFLMAAGLPLPEKIL 315

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            H        K+SKSLGNV+DP  +IE+ GVD +RY+L++      D  +D + L+K   
Sbjct: 316 VHSHWTMNKVKMSKSLGNVVDPFWLIEKYGVDTIRYYLLKRGRLTSDSNFDIEELEKDEE 375

Query: 352 ADLANGIGNLVSRSVS---MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            DL   +G L+SR  S    I  +          FTE  E I+     +     +++   
Sbjct: 376 HDLRRSLGVLLSRLQSKKLFISNEIQKQWHKKDDFTEY-EDIVHELIELPVVCAQSIDGG 434

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            ++  +  V S++  V + F  ++PW+L   + ++  T++ V    +R   ILLQ  +P 
Sbjct: 435 CVYEVINLVQSVLRRVTKLFQLKEPWKLSDDSQEKIDTLMLVA-HSLRISGILLQPIMPT 493

Query: 469 LANKIFDILFVADENRCFQSLDQRLKP 495
            + ++ D L +    R  Q+     +P
Sbjct: 494 KSTELLDQLGIPKNQRSLQNATNVFEP 520


>gi|171463853|ref|YP_001797966.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193391|gb|ACB44352.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 556

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 135/523 (25%), Positives = 224/523 (42%), Gaps = 45/523 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +L +++A+ Y N Q HIGH  E +  D+  RF R+ G +V +    D HG  I   A
Sbjct: 4   SQRRLLVTSALPYANGQIHIGHLVEYVQTDIWVRFQRMCGHEVHYVGADDTHGTPIMLRA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +   +T K  +    +  +   D   IS+D++  T    +    + ++ K+ D G I K 
Sbjct: 64  EKENLTPKELIANVWKEHKRDFDNFLISFDNYYTTDSPENEKLAQSIYLKLRDAGLIEKR 123

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE--------- 162
                Y    E +  D  +             G + +   A ++P               
Sbjct: 124 AIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDNCEKCGATYSPTDLKNPFSVVSGATP 183

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                + YFF+LS  + +      +  +  L  E RN++  +V    +S L D  +SR  
Sbjct: 184 IKKVSDHYFFKLSDPRCEEFLRDWTQVKTPLQPEARNKMKEWVGQPGESKLGDWDISRDA 243

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IPD P    YVW+DA   Y  +        G     W          H IGKDI
Sbjct: 244 PYFGFEIPDAPGKYFYVWLDAPIGYYASFLNYCQTKGLNFDEWVKPDTTTEQYHFIGKDI 303

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALR 326
           L FHA++WPA L  A    P  VF+HGF+   GEK+SKS G +I    V       +  R
Sbjct: 304 LYFHALFWPATLKFAGYRTPTNVFAHGFLTVDGEKMSKSRGTLISANSVIECGFNPEWFR 363

Query: 327 YFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +     +D   +      RVN+DL     N+ SRS   ++K + G++        
Sbjct: 364 YYFATKLNDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFGGVVSDEAMNNP 423

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-- 443
               +L   +   ++I E  + +   +AL  V+ L  +V+ + D  KPWE+ K +P+R  
Sbjct: 424 ----LLKEIAAASEKIAELYEGREYAKALRTVMELADKVNGFVDENKPWEIAK-DPEREA 478

Query: 444 -ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
               V  +T+E  R L++ L+  +P++   + + L +   +  
Sbjct: 479 NLQRVCSITLEAFRMLSLYLKPVIPQVVASVEEFLSLPPLSWA 521


>gi|307566244|ref|ZP_07628690.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345048|gb|EFN90439.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 687

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 123/543 (22%), Positives = 241/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + +D+  R+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPSDIYVRYLRLKKQEVIFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  +D  +   IS+D + RTT   H+      +KK+ + G
Sbjct: 61  ITIRARKEGITPQDVCDRYHKMIKDSFNEFGISFDVYSRTTSNVHNKFASDFFKKLYEDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +      Y    + +  D  V             G   +   +  +P++        
Sbjct: 121 KLIEKEGEQLYDESAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+  L  +              +  S++   L+  +++R 
Sbjct: 181 SGSKPVLKNTKNWYLPLNNYQEW-LKEWILKEHKEWRSNVYGQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD-----LHV 262
             DWGI +P       ++YVW DA   Y++ T  L + +  +    + W  D     +H 
Sbjct: 240 -LDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDKEPERFGNWEKWWKDPETRLIHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P          LP  V ++ F+  + +KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCIIFPIMLKAHGGYILPDNVPANEFLNLENDKISTSKNWAVWLHEYLVDFP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L +  GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVSIYGNFVNRALQLTKKYWNGIVPP 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D+ +++    V +++  ++       A  + ++L    +RY    +PW++ KT
Sbjct: 419 CGELKDIDKQVIAEFKDVKEKVEASLDAFKFREAQKEAMNLARIGNRYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  TVL ++++++  L+I  + F+P  + ++  ++ +   +         LK G  L
Sbjct: 479 DPKRVETVLNISLQLVANLSIAFEPFLPFSSAELRKLINMTTYDWSELGSTDLLKAGHQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|123966181|ref|YP_001011262.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123200547|gb|ABM72155.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 511

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 162/437 (37%), Positives = 243/437 (55%), Gaps = 8/437 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I+T + Y N +PH+G  Y  +I D +ARF RL G +V+F TG DEHG KI + A N G
Sbjct: 3   FVITTPLYYVNDKPHLGSIYTTLICDSIARFKRLSGDNVIFITGVDEHGLKIQRTASNKG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  +   D+ S  F+      DI+ + F+RT+ + H       + ++   GDIY G   G
Sbjct: 63  VDPQSHCDEISDIFKQNWKSWDITNNKFVRTSSQNHESIVNEFYNRVKASGDIYMGVQKG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E +  + E                ++W  EE  FFRLS YQ   +    + P F
Sbjct: 123 WYCVGCEEFKENPE---NLSSYKCPIHQKNLEWKNEENLFFRLSKYQS-QIEELINEPSF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P ERRNE+I+FV  GLKD S+SR    WGI +PD   +  YVW DAL  Y++      
Sbjct: 179 IYPKERRNEIINFVSKGLKDFSVSRTNVSWGISVPDTKDHTFYVWFDALLGYVSAICPNM 238

Query: 247 NPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +    ++     WPAD+H IGKDILRFHA+YWPA LLSA + +PK+VF HGF+  +G+K+
Sbjct: 239 SDPSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSAGMDVPKRVFGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++ + G +A+R++L+++I+ G DG +        +N DLAN IGNL++
Sbjct: 299 GKSLGNVLDPNLLLSKYGKEAVRWYLLKDISLGSDGDFQNKRFVDIINNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +D  +P        D ++   C+  +++   +     +  A   +++L   
Sbjct: 359 RTSSMSRKWFDNKVPDTYEL-IIDNTLQLCCNEAVEKFINHFNLYELDLAANVILNLAIN 417

Query: 424 VDRYFDAQKPWELKKTN 440
            + Y + ++PW+L K  
Sbjct: 418 TNLYLNEKQPWKLIKDE 434


>gi|254181405|ref|ZP_04888002.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184211943|gb|EDU08986.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 725

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGMPLSPEQPV 543


>gi|167814737|ref|ZP_02446417.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|217419503|ref|ZP_03451009.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396807|gb|EEC36823.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 717

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 421 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSPEQPV 535


>gi|88811010|ref|ZP_01126266.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
 gi|88791549|gb|EAR22660.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
          Length = 678

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 128/539 (23%), Positives = 230/539 (42%), Gaps = 45/539 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I   A+ 
Sbjct: 3   RKILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKLQGNECYYVCADDAHGTPIMLKARE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++     +       I +D++  T    +     ++++++ D G I +   
Sbjct: 63  QGITPEELIERFGTEHQADFAAFLIEFDNYYTTHSAENRHFATLIYERLRDAGHIERREI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           +  +  +   +  D  +             G + +   A ++P +  +            
Sbjct: 123 TQAFDPQMNMFLPDRYIKGTCPRCAASDQYGDNCEVCGASYSPGELKDPVSVLSGVRPVE 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FFRL  ++  L              E  N++  +   GLK   +SR    +G +
Sbjct: 183 RTSEHFFFRLQDFESMLRE---WANPAHTQEEVANKLKEWFDEGLKSWDISRDAPYFGFE 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP------ADLHVIGKDILRFHAI 273
           IPD P    YVW+DA   Y+ +   L +  G     +          H IGKDI+ FHA+
Sbjct: 240 IPDAPNKYFYVWLDAPIGYMASFKNLCDRTGLDFDTFWLPGSEAELYHFIGKDIVYFHAL 299

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A    P ++F+HGF+   G+K+SKS G  I     +  +  + LRY+   ++
Sbjct: 300 FWPAMLEGAGFRKPTRLFAHGFLTVNGQKMSKSRGTFITARTYLHHLNPEYLRYYFAAKL 359

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + +   +RVNADL   + N+ SR    I K + G +      T +  ++  
Sbjct: 360 GSGVHDLDLNLEDFAQRVNADLVGKLVNIASRCAGFIEKRFAGRLSA----TLAAPALYR 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYV 450
             +    +I E  + +   R + QV++L  E ++Y D QKPW L K     D+   +  +
Sbjct: 416 KFTAQGAQIAELYEKREYGRVVRQVMALSDEANQYIDQQKPWLLAKQADQADQVQMICTM 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + + R L   L+  +P++A +    L +  +N    S   R      ++  F P+  R
Sbjct: 476 GINLFRLLTAYLKPILPRMAQRAEAFLNLPAQNWDDAS---RPLLDHTINA-FTPLMTR 530


>gi|260593431|ref|ZP_05858889.1| methionine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534707|gb|EEX17324.1| methionine--tRNA ligase [Prevotella veroralis F0319]
          Length = 687

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 126/543 (23%), Positives = 240/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKRDVIFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  +D  +   IS+D + RTT K H+      ++K+ D G
Sbjct: 61  ITIRAKKEGITPQDVCDRYHKLIKDSFEEFGISFDIYSRTTSKTHNKFASDFFRKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +     +Y      +  D  +             G   +   +  +P++        
Sbjct: 121 KLVEQESEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ+ L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSQPVIKKTKNWYLPLNNYQEWLKQWILEDHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHV 262
             DWGI +P       ++YVW DA   Y++ T  L + D       + W  D     +H 
Sbjct: 240 -LDWGIPVPVKGAEGKVLYVWFDAPIGYISNTKELCDSDPEHFGNWQKWWQDPETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV- 320
           IGKD + FH + +P       +  LP  V ++ F+  +  KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLEDNKISTSKNWAVWLHEYLRDFE 358

Query: 321 -GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWNGIVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E D   +     V  ++   ++      A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELQEVDRLTIQEFKDVKAKVEAYLEVFKFREAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  L+I  + F+P  + K+ +++ + + +         L  G  L
Sbjct: 479 DPKRVETILYISLQLVANLSIAFEPFLPFSSKKLRELINMTEYDWSELGSTDLLPAGKQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 AEP 541


>gi|187649793|sp|A3N6Y1|SYM_BURP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 725

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 429 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGMPLSPEQPV 543


>gi|134281206|ref|ZP_01767915.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134247512|gb|EBA47597.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 717

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 421 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSPEQPV 535


>gi|126179956|ref|YP_001047921.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|187647748|sp|A3CX39|SYM_METMJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|125862750|gb|ABN57939.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 664

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 130/541 (24%), Positives = 231/541 (42%), Gaps = 42/541 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +  L ++  + Y N   HIGH    + AD   R+ R  G +V+F  G+D HG  I  
Sbjct: 1   MSGKP-LLVTCGLPYTNGPCHIGHLRTYVPADFYVRYMRRSGEEVVFVCGSDNHGTPIVI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G T +V  ++   +F +    +D+ +D F  T +  +H+T R + +++ + G +Y
Sbjct: 60  SAEQEGSTPRVLSERYHEHFYETFRRMDVVFDRFGMTDDAMNHETTRSIVERLIENGYVY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHN 155
               S  Y    E +  D  V                                       
Sbjct: 120 AETVSQSYCPDCERFLPDRYVEGICPHCGAVARGDECDQGCGQHLEPGEIKDAICKVCGG 179

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             ++ E+E YFFRLSA+++ LL Y    P        RN  + +VK  L D  ++R T D
Sbjct: 180 KAEYREQEHYFFRLSAFREFLLDYL---PALGGTSTARNYALGWVKELLHDWCITR-TLD 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           WG+K P     ++YVW+DA   Y++ T       G+  K +         H IG DI+  
Sbjct: 236 WGVKFPGRDDLVVYVWVDAPIGYISFTKEWAQKAGADWKDYWCGDETGVTHFIGGDIIYH 295

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYF 328
           H I+WPA L  A   LP  V + G +  +G+K SKS G V+   +  + + +  D LRY+
Sbjct: 296 HCIFWPALLKGAGYGLPSAVVASGMVTIEGKKFSKSRGYVVWTNDDYLDQGLPADYLRYY 355

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+      K+  +      +RVN ++   +GN + R++    K++ G+            
Sbjct: 356 LLSYTNHTKELDFSWKVYGERVNNEIVGTLGNFIYRTMYFAEKEFSGVPDLAPRL----- 410

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            ++    R L  +   M++     A+  +++L S  + Y     PW+L K +   A  V+
Sbjct: 411 EVIEEIERSLAAVDGLMRDYDFKNAVDAMMTLASFGNGYIQNNAPWKLIKEDRAAAEQVI 470

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              +++++ L ++ +  +P    + + +L   D+       +     G         +F 
Sbjct: 471 ADCLQIVKALVLVFEPLMPDAMQRAWTMLGYGDDIADHAIAEATAPVGARPLAKPSTLFA 530

Query: 509 R 509
           +
Sbjct: 531 K 531


>gi|126174678|ref|YP_001050827.1| methionyl-tRNA synthetase [Shewanella baltica OS155]
 gi|187647770|sp|A3D5E5|SYM_SHEB5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|125997883|gb|ABN61958.1| methionyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 689

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 234/543 (43%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      ++++D++  T  + +      ++ K+ D G I  
Sbjct: 63  AQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L          +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKINDTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L+        I +  +++   +A+ ++++L    + +     PW++ K     + A  
Sbjct: 419 AFLAK----QDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +     +      + +L Q L  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQLP---LTWDALGQDL-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|281421486|ref|ZP_06252485.1| methionine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404558|gb|EFB35238.1| methionine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 688

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 129/552 (23%), Positives = 242/552 (43%), Gaps = 45/552 (8%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+++  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  
Sbjct: 1   MEQKNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +   A+  G+T +  VD+     +   +   IS+D + RTT   H+      ++ + DKG
Sbjct: 61  VTIRAKKEGITVQEVVDRYHNLIKKSFEDFGISFDIYSRTTSPTHNKFASDFFRTLYDKG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE---- 162
            + +     +       +  D            E   G   +   A  +P + +      
Sbjct: 121 VLEEKVEEQFCDEVTGEFLTDRNIVGTCPRCGAEGAYGDQCEKCGATLSPEELINPTNKN 180

Query: 163 -----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                      + ++  L+ YQD L  +     +         +  S++   L+  +++R
Sbjct: 181 NPGHGLVKKPTKNWYLPLNKYQDWLKKWILEGHKEWR-TNVYGQCKSWLDMDLQPRAMTR 239

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD--LH 261
              DWGI +P +     ++YVW DA   Y++ T  L +    K   W      P    +H
Sbjct: 240 D-LDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDAHPEKWGTWQKWWQDPETRLVH 298

Query: 262 VIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            IGKD + FH I +P       +  LP  V ++ F+  + +KIS S    +   E + ++
Sbjct: 299 FIGKDNIVFHCIIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTSRNWAVWLHEYLVDL 358

Query: 321 G--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               D LRY L       KD  +     ++R N++L    GN V+R++ +  K + G++P
Sbjct: 359 PGKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAVYGNFVNRALQLTKKYWGGVVP 418

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G   E DE  ++    V +++ + +       A  + ++L    +RY    +PW++ K
Sbjct: 419 ACGELQEVDEKAIAEFKDVKEKVEQYLNVFKFREAQKEAMNLARIGNRYITECEPWKVWK 478

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           T+P R  T+L ++++++  LAI  + F+P  + K+  ++ + +           LK G  
Sbjct: 479 TDPKRVETILNISLQLVANLAIAFEPFLPFSSEKLRKMINMPNFEWTQLGSTDLLKAGTQ 538

Query: 499 LHKTFDPIFPRF 510
           L +  + +F + 
Sbjct: 539 LGEP-ELLFEKI 549


>gi|192359290|ref|YP_001981505.1| methionyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685455|gb|ACE83133.1| methionyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 679

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 127/543 (23%), Positives = 234/543 (43%), Gaps = 47/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               K+ +++A+ Y N   H+GH  E I  D+  RF ++ G+D  +    D HG  I   
Sbjct: 7   TSPRKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGVDCTYVCADDAHGTAIMLK 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G + +  +              +I +D++  T    + +   ++++++   G I  
Sbjct: 67  AEQLGHSPEQQIANVKAEHEADFAAFNIGFDNYHSTHSDENRELSTLIYERLKANGHIAT 126

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQW----------- 159
              +  Y    + +  D            E   G + +   A ++P+             
Sbjct: 127 RGITQAYDPEKQLFLADRYIKGTCPKCKSEDQYGDNCEKCGATYSPMDLINPKSAISGAT 186

Query: 160 ---MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E +FF L A+ D L ++  +     L  E  N++  ++ +GL++  +SR    +
Sbjct: 187 PVARESEHFFFTLPAFSDFLKAWTRAG---HLQDEVANKMAEWLDAGLQEWDISRDAPYF 243

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPAD-----LHVIGKDILRF 270
           G +IP +P    YVW+DA   Y+ +   L +  G    ++W  D      H IGKDI+ F
Sbjct: 244 GFEIPGEPGKYFYVWLDAPIGYIASLKNLLDKQGKDWYEYWKPDSTTEVYHFIGKDIVNF 303

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L SANL  P K+  HGF+   G K+SKS G  I+    +  +  + LRY+  
Sbjct: 304 HALFWPAMLHSANLRTPSKICVHGFLTVNGTKMSKSRGTFINARTYLNYLNPEYLRYYFA 363

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + +   +RVN+DL   + N+ SR+   I      +     A   +D +
Sbjct: 364 AKLTSNVDDIDLNLEDFIQRVNSDLVGKVVNIASRTAKFITNAGGVL-----ASNLADPA 418

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           +        + I  + +++   +A+ ++++L    + Y   Q+PW+L K     A T  V
Sbjct: 419 LWQQFVDAGETIASHYESRDYSKAMREIMALADAANEYIATQEPWKLAKQAGAEAQTQVV 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + + + R +   L+  VP L     + L    E   +       + G  +++ F P+ 
Sbjct: 479 CTLGINMFRAILTYLKPVVPALTAAAEEFLG---ETLSWTQ-PVSFRTGEKINE-FKPLL 533

Query: 508 PRF 510
            R 
Sbjct: 534 TRI 536


>gi|170691989|ref|ZP_02883153.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143273|gb|EDT11437.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 715

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 224/539 (41%), Gaps = 47/539 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  +        ++  + + G I  
Sbjct: 74  AEKEGITPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEETRVLSENIYLALKEAGLIDA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 RDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++  +    +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PIRKTSTHYFFRLSD--PRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAQKRGLDFDAWVRKGSTAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L+     + +I  + + +   RAL Q + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMQHPLLASLRAAVPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAKDPANAV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                  V++E  R L++ L+  +PKLA  +   L +  E   +   +  L     ++ 
Sbjct: 488 ALHETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLGI--EPLVWADANVPLSSARPINA 544


>gi|294675168|ref|YP_003575784.1| methionine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472184|gb|ADE81573.1| methionine--tRNA ligase [Prevotella ruminicola 23]
          Length = 688

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 133/543 (24%), Positives = 242/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+ +  ++  +++A+ Y N   HIGH A   + AD+  R+ RL   +VLF  G+DEHG  
Sbjct: 1   MENKTYKRTTVTSALPYANGGVHIGHLAGVYVPADIYVRYLRLKKREVLFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +  VD+  +  +D  +   IS+D + RTT + HH      +KK+ D+G
Sbjct: 61  ITVRARKEGITPQDVVDRYHKMIKDSFEEFGISFDIYSRTTSETHHKFAAEWFKKLYDEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--- 163
            + +      Y    + +  D  V             G   +      +P + +  +   
Sbjct: 121 KLTEETTEQLYDEEAKQFLADRYVTGECPHCHNEGAYGDQCEKCGRDLSPTELINPKSTI 180

Query: 164 -----------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                       ++  L+ YQD L  +     +   P     +  S++   L+  +++R 
Sbjct: 181 SGSTPVLKKTKNWYLPLNEYQDWLKQWILEEHKEWRPNVY-GQCKSWLDMDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHV 262
             DWGI +P       ++YVW DA   Y++ T  L   +  K    + W  D     +H 
Sbjct: 240 -LDWGIPVPVKDAEGKVLYVWFDAPIGYVSNTKELCEKEPEKWGNWEKWWQDEDTRLVHF 298

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I +P  +       +P  V ++ F+  + +KIS S    +   E + ++ 
Sbjct: 299 IGKDNIVFHCIIFPVMMKAHGKYIMPDNVPANEFLNLENDKISTSRNWAVWLHEYLVDMP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     + R N +L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQDRNNNELVAVYGNFVNRALQLTKKYWNGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G + + D   +     V  +I EN++      A  + ++L    +RY    +PW++ KT
Sbjct: 419 CGEWLDVDRQAIEEFKNVKIKIEENLEQFKFRDAQFEAMNLARIGNRYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+L + +++   LAI  + F+P  + K+ ++L +++           L+ G  L
Sbjct: 479 DPKRCETILNICLQLTANLAIAFEPFLPFSSKKLREMLNISNFEWEQLGSTDLLEAGHQL 538

Query: 500 HKT 502
            + 
Sbjct: 539 GEP 541


>gi|160875690|ref|YP_001555006.1| methionyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083263|sp|A9L4F6|SYM_SHEB9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|160861212|gb|ABX49746.1| methionyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267879|gb|ADT94732.1| methionyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 689

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 234/543 (43%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      ++++D++  T  + +      ++ K+ D G I  
Sbjct: 63  AQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L          +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKINDTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L+        I +  +++   +A+ ++++L    + +     PW++ K     + A  
Sbjct: 419 AFLAK----QDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +     +      + +L Q L  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQLP---LTWDALSQDL-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|167561950|ref|ZP_02354866.1| methionyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 710

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 137/547 (25%), Positives = 227/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  DV  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDVWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT K  +++  R  +   D   +S+D+F  T    +      ++  + D G I +
Sbjct: 67  AEQEGVTPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGAT 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGIDFDAWIKKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N  
Sbjct: 421 AMNHPLLATLRDAIPQIAAHYEAREYGRALRQTMELADEVNGYVDTAKPWELAKDPANAA 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     VA     +     S +Q ++    
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGVAPLMWADASKPLSSEQPIRAYQH 540

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 541 LMTRVDP 547


>gi|329915423|ref|ZP_08276269.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327544901|gb|EGF30259.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 731

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 151/541 (27%), Positives = 238/541 (43%), Gaps = 45/541 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               +L+++TA+ Y NA  HIGH  E I AD+  RF R+ G +V F    D HG  I  A
Sbjct: 39  TSPRQLFVTTALPYANAAFHIGHIMEYIQADIWVRFQRMQGHEVHFVCADDAHGAPIMIA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK-GDIY 120
           A NAGVT + FV + +   +   D   I +D++  T  + +H   + +++ + D    I 
Sbjct: 99  ADNAGVTPQEFVARIAAGRQAPLDGFHIGFDNWHSTDGEENHALSKEIYRSLRDNAQLIT 158

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 ++      +  D  +             G   +   A + P +           
Sbjct: 159 TKTIEQFFDPVKNMFLADRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGA 218

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF------VKSGLKDLSL 209
                  E +FF+LS ++        +  E  L  E  N+   +       +SGL D  +
Sbjct: 219 VPVMKSSEHFFFKLSDHKCVEFLREWAFTEGRLQPEVANKAREWLEGKDDKESGLGDWDI 278

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +     +  G     + A+      H IG
Sbjct: 279 SRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFDNTGRDFDAFMANPATEQYHFIG 338

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVD 323
           KDI  FH ++WPA L  A   +P  VF HGFI   GEK+SKS G  I P+  +   +  +
Sbjct: 339 KDITYFHTLFWPAMLHFAGRKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYLDIGMNPE 398

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  +++   +D  ++ D    RVN+DL     N+ SRS   I K +DG + T  A
Sbjct: 399 WMRYYIAAKLSAKVEDVDFNPDDFVARVNSDLIGKYVNIASRSAGFIAKRFDGHVVTDWA 458

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TN 440
            T   ++ L     V  +I      +   +AL  ++     V+ Y DA KPWEL K   N
Sbjct: 459 TTS--DTFLFGLRDVANDIHALYDGREYGKALRLIMEQADRVNAYVDANKPWELAKNPDN 516

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             R   V    +E  R L + L+  +P LA ++  +L +A     +  + + L     ++
Sbjct: 517 DARLQEVCSRLLEAFRILTLYLKPVLPALAQQVETMLAIAP--LQWSDVSKPLPHQHQIN 574

Query: 501 K 501
            
Sbjct: 575 P 575


>gi|149378169|ref|ZP_01895886.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357531|gb|EDM46036.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 677

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 130/542 (23%), Positives = 238/542 (43%), Gaps = 47/542 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++  + +++A+ Y N   H+GH  E I  D+  R+ ++ G +  +    D HG  I   
Sbjct: 7   KQQRDILVTSALPYANGPIHLGHLLEYIQTDIWVRYQKMRGQNCYYVCADDAHGTAIMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++++  +D+     +       I +D++  T  + +      +++++ + G I  
Sbjct: 67  AEREGISSESLIDRIRDEHQQDFGGFHIRFDNYYTTHSEENRQFSEYIYRQLQENGHIAT 126

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
              +  +      +  D            E   G + +   A + P + +          
Sbjct: 127 RKITQAFDPEKNMFLADRFIKGTCPKCKTEDQYGDNCEACGATYTPAELINPRSAVSGAT 186

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFFRL  + D L ++  S     L  +  N++  ++ +GL++  +SR    +
Sbjct: 187 PVDKESEHYFFRLPEFADFLANWTRSGT---LQPQVANKLAEWLDAGLQEWDISRDAPYF 243

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   YL +     +        FW AD      H IGKDI+ F
Sbjct: 244 GFEIPDAPGKYFYVWLDAPIGYLASFKNLCNREGIDFEHFWKADSTAEVYHFIGKDIINF 303

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L SA    P  V++HGF+   G+K+SKS G  I     ++ +  + LRY+  
Sbjct: 304 HALFWPSMLHSAGFRTPSAVWAHGFVTVNGKKMSKSRGTFIMARTYLDHLDPEYLRYYFA 363

Query: 331 REIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   + +    RVN+DL   + N+ SRS   I K +DG     G  TE ++ 
Sbjct: 364 AKLTGSVDDMDLNLEDFAARVNSDLVGKVVNIASRSAGFITKRFDGQ---LGTVTEHEK- 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
            L        EI +  + +   RA+ +++ L    ++Y + ++PW + K +   D    +
Sbjct: 420 -LKEFIEAGDEIADFFEAREFGRAMRRIMELADIANQYVNDEQPWVIAKQDGQDDNLQAI 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + +   L   L   +P+ A      L     +  +   +QRL+    ++K F P+ 
Sbjct: 479 CTNAINMFHLLMTYLAPVLPETAKASEAFLNA---SLDWNKREQRLE-NHGINK-FKPLM 533

Query: 508 PR 509
            R
Sbjct: 534 NR 535


>gi|305663645|ref|YP_003859933.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378214|gb|ADM28053.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 501

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 164/508 (32%), Positives = 253/508 (49%), Gaps = 15/508 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M     +Y++T I YPN +PH+GHAY  I+AD++AR+  L G +    TGTDEHG K+ +
Sbjct: 1   MNRNRYVYVTTPIYYPNDKPHLGHAYTTILADIIARWFYLQGYNTFLLTGTDEHGLKLQR 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G   K FVD+ S  FR   DVL I Y+ FIRTT+K H +  + +  K+ +KG IY
Sbjct: 61  EAEKRGKDPKTFVDEMSSIFRSYWDVLGIGYNRFIRTTDKDHEELVKYVLNKLLEKGYIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +G YSGWY    E +Y++ E     +         P++++EE+ YF R+S ++D +L   
Sbjct: 121 RGRYSGWYCSGCEKFYSEKEYIIENNTPICPIHKRPLEFIEEDTYFLRISEFRDYVLKIL 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY 238
           +                     GL+D+S++R      WGI++P DP Y +YVWIDAL NY
Sbjct: 181 KEGDVVYPKQYAIEIASKIELEGLQDISIARPKSRVYWGIELPFDPNYTLYVWIDALLNY 240

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT  GY          +W   + +IGKDIL FH   W + L    +P P+K+  H ++  
Sbjct: 241 LTGIGY-LKNIEEFTNYWSGAIQLIGKDILWFHTAIWFSILAMLGIPPPRKLLVHAYLTV 299

Query: 299 KGEKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           KG K+ KSLGNVI   + I+  G  + +R+ + R     KD     +      N DL N 
Sbjct: 300 KGHKMGKSLGNVISIEDTIKRYGNPEVVRFIIARIANYDKDTEVSWEIYDSIYNNDLLNN 359

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNLV R   +  +  +G         + DE  +     +  +  EN  N  I  A+   
Sbjct: 360 YGNLVRRVAVLAKRYING-----NVERDLDEQFVRDIDELKNKAIENYNNLNISEAIKYT 414

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +    + Y + ++PW+  + NP +    +Y  +E IR  ++LLQ  +P     I ++L
Sbjct: 415 LDIAHNTNSYLNRREPWK--EANPMK---TIYTALEAIRITSLLLQPVMPNTIKTILNML 469

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  E R  +  +      + + +   P
Sbjct: 470 GVEIE-RNIKQFNFGYIEKYKVVEAPLP 496


>gi|282879053|ref|ZP_06287813.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298787|gb|EFA91196.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 687

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 128/551 (23%), Positives = 247/551 (44%), Gaps = 44/551 (7%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E+  ++  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  
Sbjct: 1   MEEKNFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKEDVIFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  GVT +  VD+     +   +   IS+D + RTT + HH      +KK+ ++ 
Sbjct: 61  ITIRARKEGVTPQDVVDRYHSLIKKSFEEFGISFDIYSRTTSEIHHKLASDFFKKLYEEE 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--- 163
            + +     +Y      +  D  +             G   ++  +  +P++ +  +   
Sbjct: 121 KLLEQETEQYYDEEAHQFLADRYITGECPHCHHEGAYGDQCEHCGSDLSPMELINPKSAV 180

Query: 164 -----------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                       ++  L+ YQ  L  +     +         +  S++   L+  +++R 
Sbjct: 181 SGSKPVIKKTKNWYLPLNDYQTWLKKWILEGHQEWR-SNVYGQCKSWLDLDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L   +  +    + W  D     +H 
Sbjct: 240 -LDWGIPVPIEGAEGKVLYVWFDAPIGYISNTKELCESNPERWGSWEKWWKDQDTRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +P       +  LP  V ++ F+  + +KIS +    +   E ++++ 
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLEDDKISTTRNWAVWLHEYLKDLP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++R N++L    GN V+R++ +  K +DG++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQERNNSELVAIYGNFVNRALQLTKKYFDGVVPP 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D+  L     V  ++   +       A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELLDVDKQALDEFKDVKNKVEGYLDAFKFREAQKEAMNLARIGNKYMTECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P+R  TVLY++++++  LAI  + F+P  + K+  ++ +   +         LK G  L
Sbjct: 479 DPERVKTVLYISLQLVANLAIAFEPFLPFSSEKLRRLIKMDTCDWNLLGNHDLLKAGHQL 538

Query: 500 HKTFDPIFPRF 510
            +  + +F + 
Sbjct: 539 AEP-ELLFEKI 548


>gi|90022043|ref|YP_527870.1| methionyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|123276670|sp|Q21I21|SYM_SACD2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89951643|gb|ABD81658.1| methionyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 677

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 119/541 (21%), Positives = 227/541 (41%), Gaps = 41/541 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + ++ +++A+ Y N   H+GH  E I  D+  RF ++ G D  +    D HG  I  
Sbjct: 1   MTNKRQILVTSALPYANGAIHLGHMVETIQTDIWVRFQKMQGHDCTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  GVT +  + +   +         I +D++  T  + +     ++++++   G I 
Sbjct: 61  RAEQLGVTAEEQIAKVKADHEADFKDFLIGFDNYHSTHSEENKALSHLIYERVKANGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +   +  +      +  D            E   G + +  +A ++P++           
Sbjct: 121 ERSITQAFDPEKNLFLADRYIKGTCPKCGAEDQYGDNCENCSATYSPMELKNPRSVISGA 180

Query: 170 SAYQDKLLSYYESHPEF-----------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +    + + Y+ + PEF            L  E  N++  ++ +GL++  +SR    +G 
Sbjct: 181 TPVAKESVHYFFTLPEFTGYLKEWTRAGHLQDEVANKLAEWLDAGLQEWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +IP  P    YVW+DA   Y+ +     D       ++W AD      H IGKDI+ FHA
Sbjct: 241 EIPGAPGKYFYVWLDAPIGYMASFKQLCDRTGKDFDEYWKADSNCELYHFIGKDIVNFHA 300

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P KV  HGF+   G+K+SKS G  I+    ++ +  + LRY+   +
Sbjct: 301 LFWPALLSDAGFRTPTKVCVHGFLTVDGKKMSKSRGTFINARTYLDHLQPEYLRYYYAAK 360

Query: 333 IA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   + +   +RVN+DL   + N+ SR+   + K    +     +    +E + 
Sbjct: 361 LTGSVDDIDLNLEDFVQRVNSDLVGKVVNIASRTAKFVQKAGGAL-----SANIINEELW 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449
               +    I  + +N+   +A+ ++++L    + +   Q PW L K   N  +   V  
Sbjct: 416 QSFVKAGDVIAAHYENRDYSKAMREIMALADLANEFIAEQAPWALAKQEGNEQKVLDVCS 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +   R +   L+  +P+ A    + L          S          ++K F P+  R
Sbjct: 476 LGINCFRAIMTYLKPVLPQTAVAAEEFLGTELTWTGPLSFLGE----HTINK-FKPLMTR 530

Query: 510 F 510
            
Sbjct: 531 I 531


>gi|217973063|ref|YP_002357814.1| methionyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782872|sp|B8E958|SYM_SHEB2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|217498198|gb|ACK46391.1| methionyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 689

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 234/543 (43%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      ++++D++  T  + +      ++ K+ D G I  
Sbjct: 63  AQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L          +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKINDTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L+        I +  +++   +A+ ++++L    + +     PW++ K     + A  
Sbjct: 419 AFLAK----QDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +     +      + +L Q L  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQLP---LTWDALSQDL-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|219117325|ref|XP_002179457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409348|gb|EEC49280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 643

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 181/484 (37%), Positives = 276/484 (57%), Gaps = 14/484 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKA 61
            +   Y++TAI Y N   H+GHAYE   +DV+ R+ RL G   V F TG DEHGQKIA+ 
Sbjct: 105 SKSSFYLTTAINYTNGPAHMGHAYEAATSDVIVRYQRLLGTHPVYFVTGADEHGQKIAQT 164

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A +AG       DQ    F+ +   + I+ DD++RTT  RH    + LW++ +D GDIY 
Sbjct: 165 AADAGKVPIDICDQYVTGFQVLNQRILIANDDYVRTTSARHKQLAQTLWQRCADAGDIYL 224

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             YSGWY++R+E +  D E  +            P++ +EEE YFF++S Y  +L+++ E
Sbjct: 225 DTYSGWYNVREETFVTDMEAQQLD--YKDPTSGLPLKQVEEESYFFKMSKYHAQLVAHIE 282

Query: 182 SHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNY 238
           S+PEFI P   RN+++       L+DLS+SR TF WGI +P +    ++MYVW+DAL+NY
Sbjct: 283 SNPEFIQPDAHRNQILARLHTDELRDLSISRTTFSWGIPVPQNFKNNHVMYVWVDALSNY 342

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           LT   Y  +       FWPA +H+IGKDIL FH + WP  LLSA +PL  +VF+HGF+  
Sbjct: 343 LTGIDYFGHQGTLLKSFWPASVHIIGKDILWFHTVIWPCLLLSAGIPLAHQVFAHGFVND 402

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+K+SKSLGNV+DP +++++  VD  R++L +E   G +  + ++ ++   NADL + 
Sbjct: 403 REGKKMSKSLGNVVDPHDMLDKFDVDTFRWYLCKEAPFGGELSFSEESMRDMHNADLCDT 462

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGNLV R+ ++  K  DG++P     T    ++ S    V++  +  M    +      V
Sbjct: 463 IGNLVHRATNLCQKYCDGVVPDVPPPTNPPINLAS----VIKTFQARMDKLELQAGATVV 518

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           I    +V+ +   + PW LKK +   +     +   +E I  L+ LL  F+P+   K+F 
Sbjct: 519 IGAFRDVNGFLQEEAPW-LKKGDEHTETRRITVRACLEAIYALSHLLLPFLPQSMLKVFQ 577

Query: 476 ILFV 479
               
Sbjct: 578 KFNT 581


>gi|330973103|gb|EGH73169.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 593

 Score =  325 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 124/542 (22%), Positives = 223/542 (41%), Gaps = 40/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVKAEHSADFADFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++    + +  D            E   G + +   A + P    + +      
Sbjct: 121 TRSVTQYFDPEKKMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKDPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +++  +       L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDAMLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFW-----PADLHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W         H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKGATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A L  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGAELRTPTGINVHGYLTVNGQKMSKSRGTFIKARTYLDHLPPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVEANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LT----AAPSIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + RQL I L+  +P LA      L V  E   ++   + L     L+  F  +  
Sbjct: 477 ALGINLFRQLVIFLKPVLPNLAADAEKFLNV--EPLTWED-HKTLLANHQLN-PFSALMT 532

Query: 509 RF 510
           R 
Sbjct: 533 RI 534


>gi|110834460|ref|YP_693319.1| methionyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|122959435|sp|Q0VP51|SYM_ALCBS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110647571|emb|CAL17047.1| Methionyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 686

 Score =  325 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 128/545 (23%), Positives = 224/545 (41%), Gaps = 50/545 (9%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +   K+ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I 
Sbjct: 8   MSDTPRKILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGQQCIYVCADDAHGTAIM 67

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GVT +  + Q   +         +++D++  T    +     +++++  D G I
Sbjct: 68  LKAEENGVTPEQQIAQVKADHERDFADFQVNFDNYYSTHSPENRALSEMVFQRNKDAGYI 127

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------ 162
            +   +  Y  +   +  D            E   G + +   A + P + +E       
Sbjct: 128 LEKTITQLYDPQKGMFLADRFVKGTCPKCKSEDQYGDNCEVCGATYTPAELIEPYSSVSG 187

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                      FF L  ++  L  +  S         +  E I      L+   +SR+  
Sbjct: 188 ATPVEKETTQLFFDLPKFEALLREWTRSGALQEQVANKLQEWIED----LQPWDISREAP 243

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP  P    YVW+DA   Y+ +   Y D    S   +W  +      H IGKDI+
Sbjct: 244 YFGFEIPGYPGKYFYVWLDAPIGYMASFQNYCDREGLSFDDYWGKESTAELYHFIGKDII 303

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A L  P  ++SHGF+   G K+SKS G  I     ++ +  + LRY+
Sbjct: 304 NFHGLFWPAMLDGAGLRKPTAIYSHGFVTVNGAKMSKSRGTFIKARTYLDHLSPEYLRYY 363

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++    D   + +   +RVN+DL   + N+ SR+ + + K    +       TE D
Sbjct: 364 FAAKLSSRVDDFDLNLEDFAQRVNSDLVGKLVNIASRTGNFVKKFGGTLS------TELD 417

Query: 388 ESIL-SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS- 445
             +L          I +  + +   +A+ ++++L    + Y   + PW L K        
Sbjct: 418 NMMLVREVQEAGPRIADFYEKREFGKAMREIMALADHANVYIADKAPWSLSKEEGKEQEV 477

Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             +    + V R L I L+  +P LA +    + V  E   +   +Q L  G  + K F 
Sbjct: 478 LAICSTAINVFRLLVIYLKPVLPALAERAEAFMQV--EPLTWADSEQLLL-GHEIAK-FK 533

Query: 505 PIFPR 509
           P+  R
Sbjct: 534 PLLSR 538


>gi|72160793|ref|YP_288450.1| methionyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123760895|sp|Q47SZ0|SYM_THEFY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71914525|gb|AAZ54427.1| methionyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 606

 Score =  325 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 152/593 (25%), Positives = 245/593 (41%), Gaps = 88/593 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  +  + A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  I 
Sbjct: 1   MSSKRHILTAVAWPYANGPRHIGHVSGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPIQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GV+ +   D+ +R   +    L +SYD F RTT   H+   + L+  +   G I
Sbjct: 61  VLADQEGVSARELADRYNRIIAEDLVALGLSYDLFTRTTTANHYAVVQELFTGLYRNGYI 120

Query: 120 YKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV----------------- 157
           +     G  S          Y        G DG   +   N                   
Sbjct: 121 FSKTTKGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGKQLDPTDLINPRSKING 180

Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              ++++ E +   L A+ ++L  + +S      P     +    +   L+  +++R   
Sbjct: 181 ETPEFVDTEHFMLDLPAFAEQLSEWLKSKGGEWRPNVL--KFSLNLLDELQPRAITRD-L 237

Query: 215 DWGIKIPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD----LHV 262
           DWG+ IP +     P   +YVW DA+  YL+ +       G      K+W        + 
Sbjct: 238 DWGVPIPLEGWRDQPNKRLYVWFDAVIGYLSASIEWAKRTGDPEAWRKWWQNSDAESFYF 297

Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FH+  WPA LL                 L LP +V S  F+  +G K S S  
Sbjct: 298 MGKDNIVFHSEIWPAMLLGYSGKGSKGGEPGSLGALNLPTEVVSSEFLTMEGRKFSSSRR 357

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + +E    DALRY+++      +D  +      +R N +L    GNLV+RS+SM
Sbjct: 358 VVIYVRDFLERYDADALRYYIIAAGPETQDTDFTWAEFVRRNNDELVATWGNLVNRSISM 417

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K+   + P  G  T++D ++L         + E +       AL + + +V+E ++YF
Sbjct: 418 AAKNIGHI-PEAGELTDADRAVLDASKAAFATVGERLNRAQFKAALQEAMRVVAEANKYF 476

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             Q PW+LKKT+P R  TVL+V ++++     LL  F+P  +NK++++L           
Sbjct: 477 SEQAPWKLKKTDPKRMETVLHVALQLVSDAKTLLTPFLPASSNKVYEMLGGTGTWTGMPR 536

Query: 489 LDQR-------------------------------LKPGFMLHKTFDPIFPRF 510
           L++                                + PG  L K   P+F + 
Sbjct: 537 LEEATDSIGGEEGVSTYPVITGDYADNEARWESIPIVPGTPL-KPPTPLFRKL 588


>gi|226194485|ref|ZP_03790083.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225933570|gb|EEH29559.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 717

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 130/533 (24%), Positives = 222/533 (41%), Gaps = 47/533 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 421 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  V++E  R L++ L+  +P++A  +   L +A     +      L P
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGTPLSP 531


>gi|198431365|ref|XP_002126600.1| PREDICTED: similar to putative methionyl tRNA synthetase [Ciona
           intestinalis]
          Length = 567

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 161/512 (31%), Positives = 263/512 (51%), Gaps = 28/512 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHR-LDGLDVLFTTGTDEHGQKIAKAAQ 63
           +  Y +T I Y N+ PHIGH Y   +AD   R+ + +   +    TGTDE+G K+ KAA 
Sbjct: 29  KTYYATTPIYYVNSVPHIGHLYTTTLADTACRWKQLVTDTECRLATGTDEYGSKVMKAAA 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              + T  + ++ S  F++M D   +SY DFIRTTE+RH +T +  W+ +   G IYKG 
Sbjct: 89  INDMETIEYCNKISSRFKEMCDEFGLSYHDFIRTTEERHKETVQHFWEVVQSNGYIYKGI 148

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH------NPVQWMEEEGYFFRLSAYQDKLL 177
           Y GWY   DE +    +V +  +     +++      + V+W +E  Y F+LS + D + 
Sbjct: 149 YEGWYCTSDETFLTQSQVEEVHNKSTGKSEYVSIESGHAVEWTKETNYMFQLSFFTDIIR 208

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDAL 235
               S P+F+ P + RN V+  +   + DLS+SR+     WGI +P D    +YVW+DAL
Sbjct: 209 EKILSDPDFVYPSKARNAVLKLLDEQIGDLSISRERSRVPWGIPVPRDSSQTIYVWMDAL 268

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT +GY  +        WPAD+H IG DIL+FHAI+WPAFL++A + LPK++ +   
Sbjct: 269 VNYLTVSGYPRSSYTE---MWPADVHFIGVDILKFHAIFWPAFLMAAGIELPKQIVASSH 325

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS GNV+DP ++  +V  +  +YFL+R+     D  Y +  + + +NADL 
Sbjct: 326 WTIDYSKMSKSKGNVVDPFDIAGKVTAEGFKYFLLRQGVLEHDCNYTESLVYEVINADLV 385

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEI 401
           N +GN ++R+ +  L   +   P                   T+ D + +     +    
Sbjct: 386 NVLGNCLNRAGAKKLNPQNHYPPFHKEIFSKDELGNYIEKRITDLDMNYIQQVKNLPAVA 445

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLA 459
             +      + A+ ++IS+  E +      + W+L +   +     ++++   E +R   
Sbjct: 446 DSHCSKFHFYNAIHEIISIAREANMMVHRHQAWKLDEHPDDLKLLESIVHSVFEGLRVAG 505

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           ILLQ  +P LA K+ D L +    R +   ++
Sbjct: 506 ILLQPMIPTLATKLLDKLNIPLNERTWVKANE 537


>gi|301112046|ref|XP_002905102.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262095432|gb|EEY53484.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 463

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 176/436 (40%), Positives = 268/436 (61%), Gaps = 14/436 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++T I Y NA PHIGH +  ++AD L+R+H++ G DVLFTTGTDEHG K+ +AA+ +G 
Sbjct: 32  FVTTPIFYVNASPHIGHVHSAVLADALSRWHKVKGSDVLFTTGTDEHGLKVQEAAEKSGT 91

Query: 68  T-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T  K F D+ S  F ++  V ++ Y  FIRT+++ HH+     W+ I D G IY G +  
Sbjct: 92  TDYKAFCDEVSSRFNEIFQVANVDYSRFIRTSDEDHHEAVNAFWRTIRDNGYIYLGDHES 151

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           WY   DE++  + +V    D      +      +PV+ + EE Y FRLSA+QD+LL + +
Sbjct: 152 WYCKSDESFLTEMQVEDKEDAHGNVVKVSKESGHPVEMLREENYKFRLSAFQDRLLEWLD 211

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           ++P+ I+P  R NEV + V  GL+DLS+SR  +   W I +PDD ++ +YVW+DALTNYL
Sbjct: 212 ANPDVIVPKSRYNEVRAAVAGGLRDLSVSRLSEKIKWAIPVPDDDKHCVYVWLDALTNYL 271

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T+ GY    D +    WPA  H++GKDIL+FHAIYWPAFL++A LPLPK+V +H      
Sbjct: 272 TSAGYPGAIDHA----WPAAYHIVGKDILKFHAIYWPAFLMAAGLPLPKRVVAHAHWTVG 327

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKSLGNV+DP E++ + G D +R+FL+RE     DG ++ + L+ R N++LA+  G
Sbjct: 328 NVKMSKSLGNVVDPHELLSKYGSDFVRFFLLREGVLTNDGDFNAEALEDRANSELADTFG 387

Query: 360 NLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           NLVSR      ++K      P     T  D+++++    +  ++ +        R L ++
Sbjct: 388 NLVSRCTGKAVLVKGIVPKRPEFDRLTAEDKTLVAKGQALADKVEQLFDTPDFARGLKEI 447

Query: 418 ISLVSEVDRYFDAQKP 433
           +  + +V+RYF   +P
Sbjct: 448 VFFLHDVNRYFTIMEP 463


>gi|289208948|ref|YP_003461014.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288944579|gb|ADC72278.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 678

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 132/546 (24%), Positives = 227/546 (41%), Gaps = 49/546 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +   K+ +++A+ Y N   H+GH  E I  D+  RF R  G +V++    D HG  I 
Sbjct: 1   MTDTPRKILVTSALPYANGPIHLGHLVEYIQTDIWVRFQRARGHEVIYVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+  +  + +  +          + +D +  T    + +    ++  + D G I
Sbjct: 61  LKARAEGIEPEELIARVRQEHEADFSEFLVDFDHYHSTHSDENRELAAHIYTALRDAGHI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------ 162
                   Y      +  D            E   G   +   A ++P+   +       
Sbjct: 121 ETRTIDQAYDPEAGMFLPDRFIKGTCPNCGAEEQYGDSCEACGATYSPLDLKDPVSAISG 180

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   E YFF+L  ++  L  +  S     L    RN++  +  +GL D  +SR   
Sbjct: 181 ARPESRQSEHYFFKLGDFEAFLREWTGSGR---LQDAIRNKLDEWFDAGLTDWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IPD P    YVW+DA   Y+ +   Y +        +W AD      H IGKDI 
Sbjct: 238 YFGFEIPDAPGKYFYVWLDAPIGYMASFRAYAEKQGLDFDAWWGADSDAELYHFIGKDIA 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  VF HGF+   G+K+SKS G  I   + ++ +  ++LRY+
Sbjct: 298 YFHTLFWPAMLHGAGFRTPSAVFCHGFLTVNGQKMSKSRGTFIRARDYLDHLNPESLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           L  ++     D   + D   +RVN+DL   + N+ SR    I K   G +       +  
Sbjct: 358 LAAKLGAGVDDLDLNLDDFVQRVNSDLVGKLVNIASRCAGFITKRSHGELAAELPRPDLH 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
           E+ ++      + I +  + +   +A+ ++++L  + ++Y D  +PW L K     A   
Sbjct: 418 EAFVAEG----EAIAQAFEKREYAQAIRRIMALADQANQYIDEAQPWVLAKQEGREAEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFD 504
            +    +++ R L + L   +PKLA      L +        + D R    G  + K F 
Sbjct: 474 AISTQGLDLFRILIVYLAPVLPKLAADAAAFLRLDS-----LAWDTRAPLVGHSIEK-FK 527

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 528 PLMTRI 533


>gi|163753508|ref|ZP_02160632.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Kordia
           algicida OT-1]
 gi|161327240|gb|EDP98565.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Kordia
           algicida OT-1]
          Length = 739

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 129/542 (23%), Positives = 238/542 (43%), Gaps = 46/542 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M +   +  I+ A+ Y N   HIGH A   + AD+ AR+ RL G DV F  G+DEHG  I
Sbjct: 58  MTQNPQRYTITAALPYTNGPIHIGHLAGVYVPADIYARYLRLIGKDVAFMCGSDEHGVAI 117

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  GV+ +  +D+     +   +   IS+D++ RT+ + HH T    +KK+ + G+
Sbjct: 118 PMRAKKEGVSPQDIIDKYHGIIKQSFEDFGISFDNYSRTSAEIHHKTASDFFKKLYEDGE 177

Query: 119 IYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE----- 162
             +      Y    + +  D            E   G   +   +  +  + +       
Sbjct: 178 FIEEVTEQLYDAEADQFLADRFVVGTCPKCNYEEAYGDQCENCGSSLSGTELINPKSAIT 237

Query: 163 ---------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    + +F  L  Y D L  +     +         +V S+V  GL+  +++R  
Sbjct: 238 GNVPTLKQTKHWFLPLDKYSDFLNEWIVEGHKKDWKPNVYGQVKSWVDDGLRPRAVTRD- 296

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKD 266
            DWGI +P +     ++YVW DA   Y++ T      +G   + +  D     +H IGKD
Sbjct: 297 LDWGIPVPVEGAEGKVLYVWFDAPIGYISATKEWAEREGKDWEPYWKDSTTKLVHFIGKD 356

Query: 267 ILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA- 324
            + FH I +P+      +  LP  V ++ F+  +G K+S S    +   E +E+      
Sbjct: 357 NIVFHCIIFPSMLKAHGDYILPDNVPANEFLNLEGRKLSTSKNWAVWLHEYLEDFPGKED 416

Query: 325 -LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L       KD  +     + R N++L   +GN ++R + +  K YDG++P     
Sbjct: 417 VLRYALTANAPETKDNDFTWKDFQTRNNSELVAILGNFINRVIVLTHKYYDGIVPEYTGE 476

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E     L+        I  +++      A  ++++L    +++  A +PW+  K +P+ 
Sbjct: 477 YEE----LTQIQHFPNVIASSIERYRFREASQELMNLARLGNQFLQANEPWKKIKEDPET 532

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPGFMLH 500
              ++YV +++   +A+L + F+P  A K+ ++L + D N  +  +  +   L  G  ++
Sbjct: 533 VKGIMYVALQIAAAIAVLSEPFLPFTAKKLKNMLAL-DANLGWNDIATKEILLPTGHKIN 591

Query: 501 KT 502
           + 
Sbjct: 592 EK 593


>gi|242314917|ref|ZP_04813933.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254190803|ref|ZP_04897310.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938478|gb|EDO94148.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|242138156|gb|EES24558.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 717

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 421 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGMPLSPEQPV 535


>gi|264679983|ref|YP_003279892.1| methionyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262210498|gb|ACY34596.1| methionyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 715

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 145/559 (25%), Positives = 236/559 (42%), Gaps = 61/559 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 4   RKLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKKAGFIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +  ++ + P   +             
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E   ++  +             GL D  +
Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQNGKHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPDLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P ++  HGF+  + GEK+SKS G  +DP++ +  ++  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   I K +DG     G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDG---RLG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +E  +++L+        I    + +   RA  +++ L  +V+ Y DA KPWEL K   
Sbjct: 421 QVSEDGQALLAALREQQAAIVAAYEARDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L   +P +A ++   L V  E   F  + + L  G  +
Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVARFLIVPPE--SFADVVKPLGAGHQI 538

Query: 500 -----------HKTFDPIF 507
                       K  + +F
Sbjct: 539 GIYQHLMQRVDPKQLEALF 557


>gi|326506100|dbj|BAJ91289.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 115/559 (20%), Positives = 225/559 (40%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 18  GRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 77

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+     + C+ ++ K+ +   + +
Sbjct: 78  ALEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTE 137

Query: 122 GCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    E +  D              E  +G   +  +   NP + ++ +     
Sbjct: 138 NTMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 197

Query: 165 --YFFRLSAYQDKLLSYYESHPEF---------ILPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L                  +          +++K GLK   ++R  
Sbjct: 198 NAPRIRDTDHLFLELPLLSDKLVNYINNTSVAGMWSQNAIQATNAWLKEGLKQRCITRD- 256

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 257 LKWGVPVPHEKYKDKVFYVWFDAPIGYISITASYTPDWEKWWKD-PDNVELFQFMGKDNV 315

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +     +  +  
Sbjct: 316 PFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKITNIPSEVW 375

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +IP   
Sbjct: 376 RYYLLMNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFVAKPAGGGYDSIIPDAP 435

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                    ++    ++ ++   E M+   + + L   +++ S+ + Y    + W L K 
Sbjct: 436 NAESHPLTNTLAEKTNKWVEHYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRLYKE 495

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF----------QS 488
           +P   + V+  +V V+  LA LL+ F+P  + ++   L +  DE+  F          + 
Sbjct: 496 DPATCAIVMKTSVGVVYLLACLLEPFMPSFSREVLHQLNMSPDEDLSFCDDKGETAKAKR 555

Query: 489 LDQRLKPGFMLHKTFDPIF 507
               +  G  + K   P+F
Sbjct: 556 PWDFVSAGHKIGKPV-PLF 573


>gi|304409055|ref|ZP_07390676.1| methionyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303058|ref|ZP_07582813.1| methionyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304352876|gb|EFM17273.1| methionyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913418|gb|EFN43840.1| methionyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 689

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 234/543 (43%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      ++++D++  T  + +      ++ K+ D G I  
Sbjct: 63  AQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L          +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L+        I +  +++   +A+ ++++L    + +     PW++ K     + A  
Sbjct: 419 AFLAK----QDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +     +      + +L Q L  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQLP---LTWDALSQDL-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|149280091|ref|ZP_01886215.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149229105|gb|EDM34500.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 716

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 133/555 (23%), Positives = 237/555 (42%), Gaps = 61/555 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ A+ Y N   HIGH A   + AD   R+ R +  DV F  G+DE+G  I   A+
Sbjct: 21  KRYTVTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVPITLKAK 80

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+      D      +S+D + RT+   HH T    ++ + +KG   +  
Sbjct: 81  KEGVTPQEIVDKYHEIIGDSFKEFGVSFDIYHRTSSLMHHQTASDFFENLYEKGVFTEEV 140

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHN---------------------PV 157
              +Y  + + +  D          G +  Y +   N                     PV
Sbjct: 141 TEQYYDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTLSGEKPV 200

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +  E + +F  L  Y+D+L +Y E H E+        +  S++ +GL+  +++R   DWG
Sbjct: 201 RK-ETKNWFLPLDKYEDQLRTYIEGHKEWR--PNVYGQCQSWLNAGLQPRAMTRD-LDWG 256

Query: 218 I--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------------------AKF 255
           +   + D    ++YVW DA   Y++ T  L                            + 
Sbjct: 257 VRVPVKDAEGKVLYVWFDAPIGYISATKELFEYARLDVWNPKSEEYYINKNTLTKGNWED 316

Query: 256 WPAD-----LHVIGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGN 309
           +  D     +H IGKD + FH + +PA L+   +  L   V ++ F+  +G+KIS S   
Sbjct: 317 YWKDENTKLVHFIGKDNIVFHCVIFPAMLMAHGDYTLADNVPANEFLNLEGQKISTSKNW 376

Query: 310 VIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            +   E + E     D LRY L       KD  +     + R N +L   +GN ++R V 
Sbjct: 377 AVWLNEYLTEFKGQQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFINRVVV 436

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +  K + G +P        D+ ++   +     I  +++N     AL +V+++    ++Y
Sbjct: 437 LTHKYFGGKVPMLMEVKPEDQQVIDELAEYPARISASIENYRFREALMEVMNVARLGNKY 496

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
               +PW++ KT+ DR  T+L +++++   L IL++ F+P  A+K+  +L          
Sbjct: 497 LADMEPWKVIKTDEDRVRTILNISLQIAANLEILIEPFLPFTADKLMKMLNYGGHQWESA 556

Query: 488 SLDQRLKPGFMLHKT 502
                L  G  L++ 
Sbjct: 557 GKMDLLCRGHQLNEP 571


>gi|283945504|ref|NP_001017000.2| methionyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|195539926|gb|AAI67909.1| Unknown (protein for MGC:135671) [Xenopus (Silurana) tropicalis]
          Length = 905

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 116/548 (21%), Positives = 231/548 (42%), Gaps = 41/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  + + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 258 VEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATE 317

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+ +     +    DIS+D F RTT +      + ++ ++  +  +
Sbjct: 318 TKAMEEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTTTQHQTTIAQDIFHRLLKRDFL 377

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSA 171
                        + +  D  V             G   +     +  +E +    ++  
Sbjct: 378 LTDTVEQLRCETCQRFLADRFVEGTCPFCNYEEARGDQCDKCGKLINAVELKKPQCKVCK 437

Query: 172 YQDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKT 213
                 S      +     +R  + +                   +++ GLK   ++R  
Sbjct: 438 KSPVKKSSKHLFLDLPKLEKRLEQWLEKSFSSGDWTSNARFITRSWIRDGLKPRCITRD- 496

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
             WG  +P D     + YVW DA   Y++ T    +      K        H + KD + 
Sbjct: 497 LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWWKSTQQVQLYHFMAKDNVP 556

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P+ LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 557 FHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSRGVGVFGDMAKDTGIPADIWR 616

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+     G+D  +    L  + N++L N +GN V+R+   + K ++G +P     +E 
Sbjct: 617 FYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFFNGCVPEMELLSE- 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D+ +L+  +  LQ+  ++++   I  AL  ++++    ++Y    +PW+  K N     R
Sbjct: 676 DKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQYIQVNEPWKCIKGNQQEQKR 735

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPGFMLHKT 502
           A TV  V V +   L+++L  ++P ++  I + L +  E++        RL+ G  +   
Sbjct: 736 AGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQESKVLTTDFCCRLQSGHQIGN- 794

Query: 503 FDPIFPRF 510
             P+F + 
Sbjct: 795 VSPLFQKL 802


>gi|83644722|ref|YP_433157.1| methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123739980|sp|Q2SKU2|SYM_HAHCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83632765|gb|ABC28732.1| Methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 681

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/523 (24%), Positives = 220/523 (42%), Gaps = 44/523 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K+ +++A+ Y N   H+GH  E I  D+  RF +L G    +    D HG  I   A
Sbjct: 4   EPRKILVTSALPYANGPIHLGHLLEYIQTDIWVRFQKLRGHQCTYVCADDAHGTAIMLKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  +DQ + + R       I +D++  T  + + +    ++K   D G I   
Sbjct: 64  EQMGITPEQLIDQVNADHRRDFAEFLIEFDNYYSTHSEENRELSSYIYKACLDAGKIATR 123

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM----------- 160
             +  Y      +  D            E   G + +  ++ + P + +           
Sbjct: 124 TITQAYDPEKNLFLADRFIKGTCPKCKAEDQYGDNCEVCSSTYTPAELINPRSAISGATP 183

Query: 161 ---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E   +FF+L  +Q+ L  +  S     L  +  N++  ++ +GL++  +SR    +G
Sbjct: 184 IEKESTHFFFKLPDFQEFLQKWTRSGT---LQPQIANKLAEWLDAGLQEWDISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            +IPD P    YVW+DA   Y+ +   L          ++W  D      H IGKDI+ F
Sbjct: 241 FEIPDQPGKFFYVWLDAPIGYMASFKNLCARRADLDFDEYWKKDSTAELYHFIGKDIINF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WP+ L  A+   P  V++HGF+   G K+SKS G  I     +E +  + LRY+  
Sbjct: 301 HALFWPSMLSCADFRTPSAVYAHGFVTVDGAKMSKSRGTFIMARTYLEHLNPEYLRYYFA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            ++     D   +      +VNADL   + N+ SR    I K    + P           
Sbjct: 361 AKLTSNVDDLDLNLQDFTLKVNADLVGKLVNIASRCAKFITKAGGKLSPQISEP-----E 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--V 447
           ++         I +  +++   +A+ ++++L    ++Y D + PW+L K          V
Sbjct: 416 LIEQFLSKSDFIAQAYEDREFGKAVREIMALADLANKYIDEKAPWKLAKEEGKEQEVLDV 475

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSL 489
             V V + R L   L   +P +A    + L      NR  + L
Sbjct: 476 CSVGVNLFRILITYLAPVLPGVAAASAEFLNAPIVWNRPLEPL 518


>gi|193216594|ref|YP_001999836.1| methionyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001917|gb|ACF07132.1| methionyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 517

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 168/518 (32%), Positives = 279/518 (53%), Gaps = 11/518 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ ++  YIST I YP+ + HIGH     +A V   F R +G D  F TG DEHGQKIA+
Sbjct: 1   METKKTFYISTPIYYPSGKLHIGHLLTTTLAWVYRNFKRNEGYDTFFVTGIDEHGQKIAQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+ A ++ + + D+ ++ F ++ D L I YD F RTT  +H    + ++  +  KG IY
Sbjct: 61  KAKLANLSDQAYADEQAKIFLELWDDLKIDYDFFSRTTSPKHEVIVKKVFDALLKKGFIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G YS+ DE +    + +      Y+    + +  + EE YFF++S++   +  Y+
Sbjct: 121 KGKYEGLYSVEDEEFLTKSQAFLINGEYYHPTSKHKLNVVSEESYFFKMSSFGPWIKDYF 180

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQ---YIMYVWIDALT 236
           E++P+F+      NE+++     GL+DLS++R +FDWGIK+        +++YVW+DAL 
Sbjct: 181 ENNPDFVSSKATINEMLNNFINPGLEDLSVTRVSFDWGIKLDQYQDKKTHVIYVWLDALF 240

Query: 237 NYLTTTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           NYLT   + +  D +  KFW      +H++GK+I RFH IYWP FL + +L LP K   H
Sbjct: 241 NYLTALNFWEEDDENYQKFWVNGTERVHILGKEISRFHCIYWPIFLQALDLKLPTKEIVH 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +I+    K+SKS GNVIDP+ ++++ G++ ++YF   ++    D  + +  L   +NAD
Sbjct: 301 SWIVTPEGKMSKSKGNVIDPLPLVKKYGIEEVKYFFSSQVNIDSDFAFSESLLINVLNAD 360

Query: 354 LANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN  GNLV+R++ M+ + + +G           D+ +     ++ Q   E+  N    +
Sbjct: 361 LANNFGNLVNRTIKMVNQSFKEGTTYQEKDLLALDKELYLKIEQLYQSYCEHFNNFYADK 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           AL + + L S ++ Y D  +PW+L K N +R + VL   +  I  +  +L    P  + +
Sbjct: 421 ALKKAVELSSFLNEYIDRNEPWKL-KDNLERLNVVLNTLLNGIYVVNYMLSVAFPIKSAR 479

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L     ++    +    K  +      + +FPR 
Sbjct: 480 INQFLCQTKLSKGL--IFNFNKFDYKEVFVDNIVFPRI 515


>gi|148692551|gb|EDL24498.1| methionine-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 916

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 121/550 (22%), Positives = 226/550 (41%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 268 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATE 327

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+     IS+D F RTT  +     + +++++  +G +
Sbjct: 328 TKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 387

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +         R   +  D  V            +G          N ++  + +     
Sbjct: 388 LRDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICR 447

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R S +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 448 SCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD- 506

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   Y++ T    +      K  P  +     + KD +
Sbjct: 507 LKWGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWEKWWKN-PEQVDLYQFMAKDNV 565

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P  +L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 566 PFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIW 625

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T 
Sbjct: 626 RFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMALTP 684

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 685 DDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQ 744

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +++ I   L +          S    L  G  + 
Sbjct: 745 RAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRILATSFICTLPAGHRIG 804

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 805 -TVSPLFQKL 813


>gi|167580180|ref|ZP_02373054.1| methionyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 709

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 134/548 (24%), Positives = 230/548 (41%), Gaps = 51/548 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHHFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
            ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N  
Sbjct: 429 ATNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGF 497
                  V++E  R L++ L+  +P++A  +   L +     AD N+   S +Q ++   
Sbjct: 489 ALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSS-EQPIRAYQ 547

Query: 498 MLHKTFDP 505
            L    DP
Sbjct: 548 HLMTRVDP 555


>gi|126696331|ref|YP_001091217.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543374|gb|ABO17616.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 514

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 167/456 (36%), Positives = 249/456 (54%), Gaps = 10/456 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   
Sbjct: 2   TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   D+ S  F +     +IS+D FIRT+ K H       ++++    DIY G   
Sbjct: 62  GIEPKSHCDEISEVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E    +           ++W  EE  FFRLS YQ   +    + P 
Sbjct: 122 GWYCVGCEEFKDNPE---NSSTYKCPIHQKNLEWKNEENLFFRLSKYQK-EIERIINEPS 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     
Sbjct: 178 FIEPIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISSD 237

Query: 246 DNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                 +      WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKVF HGF+  +G+K
Sbjct: 238 ATEHSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K ++  +P       +++ + +     ++    N  N  +  A  +V+SL  
Sbjct: 358 NRTSSMSRKWFNNKVPNKEKI-FNEKKLENFAKIAVENYIYNFDNYKLDLAANEVLSLAI 416

Query: 423 EVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIR 456
             + Y +  +PW L K   +      ++Y  +E  R
Sbjct: 417 NTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTR 452


>gi|119181183|ref|XP_001241833.1| hypothetical protein CIMG_05729 [Coccidioides immitis RS]
          Length = 581

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 185/544 (34%), Positives = 277/544 (50%), Gaps = 47/544 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +R+  Y++T I Y NA PH+GH Y +++AD+L R+  L G  D    TGTDEHG KI +A
Sbjct: 47  QRKPYYVTTPIFYVNASPHVGHLYTLVLADILKRWQVLLGNNDAQLLTGTDEHGIKIQQA 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + G+      DQN + F+D+A   ++ +D FIRTT+  H D  +  W+ +  +G IY 
Sbjct: 107 AASHGLEPIKLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYT 166

Query: 122 GCYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DE +Y  + V+       G            V+W  E  Y FRLSA++D+
Sbjct: 167 AKHEGWYSVSDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWSSETNYHFRLSAFKDR 226

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWID 233
           LL +Y  +P FI P    + ++  V SGL DLS+SR  +   WGI++P D    +YVW+D
Sbjct: 227 LLDFYRENPTFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLD 286

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVI------------GKDI-LRFHAIYWPAFLL 280
           AL NYLT  GY   P       WPA++HV+            G D+  RFH +YWPAFL+
Sbjct: 287 ALINYLTYAGYPFTPGKENQSIWPANVHVVFARSSQKADACPGADLDARFHCVYWPAFLM 346

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + +LPLP++V SH       EK+SKS GNV++P+  +   GVD LR++L  +     D  
Sbjct: 347 ALDLPLPRQVLSHAHWTIGREKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDAD 406

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCS 395
           Y+   + +R    L  G+GNL SR V     +    I           +E+D     +  
Sbjct: 407 YENAFVTERYKKTLQWGVGNLTSRLVRSKKWNVRRSIEWGVEGRFPPPSEADRKHQQLLE 466

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +    R  M +    +A+  V+ ++ E             + T P   S V+Y T E +
Sbjct: 467 GIRNVTRSWMDDLNPRKAVESVVGIIHES------------ENTEPTELSRVIYNTAESL 514

Query: 456 RQLAILLQAFVPKLANKIFDILFVA--DENRCFQSL-----DQRLKPGFMLHKTFDP-IF 507
           R   ILLQ F+P+ + ++ D+L VA   E R F++      +    P   L K  +  +F
Sbjct: 515 RIAGILLQPFMPEKSARLLDMLGVAGDPEKRSFEAAIFGADEHYGVPLVELKKGTEATLF 574

Query: 508 PRFL 511
           P  +
Sbjct: 575 PPLV 578


>gi|307728927|ref|YP_003906151.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583462|gb|ADN56860.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 719

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 133/526 (25%), Positives = 211/526 (40%), Gaps = 43/526 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I  
Sbjct: 74  AEMEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P   +          
Sbjct: 134 RDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTDLVNPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKT 213
                   YFFRLS  + +             P            +G   L D  +SR  
Sbjct: 194 PVRKTSTHYFFRLSDPRCENFLREWVG-GLAQPEATNKMREWLGDAGEARLADWDISRDA 252

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDI 267
             +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDI
Sbjct: 253 PYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAQKRGLDFDAWVRPGSKAEQYHFIGKDI 312

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALR 326
           L FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + LR
Sbjct: 313 LYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSFIETGLNPEWLR 372

Query: 327 YFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      + 
Sbjct: 373 YYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SA 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDR 443
               +L      L +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N   
Sbjct: 429 MQHPLLVTLRAALGQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANAVA 488

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 V++E  R L+I L+  +PKLA  +   L V        +L
Sbjct: 489 LHETCSVSIEAFRLLSIALKPVLPKLAEAVEAFLGVEPLQWADANL 534


>gi|126440819|ref|YP_001058102.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|167909986|ref|ZP_02497077.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196314|ref|ZP_04902738.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|126220312|gb|ABN83818.1| methionine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|169653057|gb|EDS85750.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 717

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 223/537 (41%), Gaps = 47/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWIRKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D+ KPWEL K   N  
Sbjct: 421 AMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                  V++E  R L++ L+  +P++A  +   L +A     +      L P   +
Sbjct: 481 ALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAP--LTWADAGMPLSPEQPV 535


>gi|284931170|gb|ADC31108.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 597

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 170/532 (31%), Positives = 279/532 (52%), Gaps = 23/532 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +K YIST I Y +  PHIGHAY  I+ D LARF +  G DV F +GTDE G+KI  
Sbjct: 11  MLKNKKCYISTPIYYASGNPHIGHAYTTILGDFLARFKKQRGYDVFFLSGTDEFGKKIET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++  +T +  VDQ S  F+++ D+L+I    F+RTTE +H +  + ++     K  IY
Sbjct: 71  KAKSLNLTPQKMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIY 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------------YKGADGQYYNAQHNPVQWMEEEGYF 166
              + G Y +  E  Y    V                  D Q Y    + +  + E  YF
Sbjct: 131 LDQWQGLYCVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVGHKISSINEPSYF 190

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQ 225
            +LS + + +      +   + P  R  E+++     GLKDLS+SR +  WGI+ P +  
Sbjct: 191 IKLSEFSNFIKESLTDNVPSVFPTSRNKEMLNNFVNVGLKDLSISRTSISWGIETPLNKS 250

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLS 281
           + +YVW+DAL +YLT+ G+    D    +FW  D    +H+I K+I RFH IYW  FL  
Sbjct: 251 HRIYVWLDALFSYLTSMGFGSEDDKLYQEFWNNDSSERIHLIAKEITRFHRIYWVIFLKM 310

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +  P ++ SHG+IL + G K+SKSL N+IDPIE+ E  GVD LRY+L++E++  +DG 
Sbjct: 311 LGIKQPTRMISHGWILDENGNKMSKSLNNIIDPIELAELFGVDQLRYYLLKELSLSEDGK 370

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             K  +++ +N+DL N +GNLV R + M+    +  I    A  E ++  L+   ++  E
Sbjct: 371 VGKRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAE 430

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLA 459
             + ++   I  A+  V+++  E     + +KPWEL K N     + VL+     IR + 
Sbjct: 431 FEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANVLFAGACAIRTVF 490

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
           +LL+  +   + ++++ +    E    ++++   +     ++K+   +F + 
Sbjct: 491 VLLEPILTTKSKEVYEQMNFTPEQTQLKNINNFEQLFNHKINKSKK-LFQKL 541


>gi|261879055|ref|ZP_06005482.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334337|gb|EFA45123.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 691

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 128/543 (23%), Positives = 242/543 (44%), Gaps = 43/543 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+  R+ RL   DV+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYVRYLRLKKQDVVFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +   D+  +  RD      IS+D + RTT K HH      +KK+ D G
Sbjct: 61  ITIRAKKEGITPQEVCDRYHKMIRDSFKEFGISFDIYSRTTSKIHHKFAADFFKKLYDDG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +      Y      +  D  +             G   +   +  +P + ++     
Sbjct: 121 KLVEKETEQLYDEEAHQFLADRYITGTCPHCGNPNAYGDQCEKCGSDLSPEELIDPHSTI 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ   L  +  +           +  S++   L+  +++R 
Sbjct: 181 SGAKPVKKVTKNWYLPLNDYQQW-LKAWILNGHKEWRSNVYGQCKSWLDLDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PAD--LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L + +  +   W      P    +H 
Sbjct: 240 -LDWGIPVPVEGADGKVLYVWFDAPIGYISNTKELCDSNPEQWGTWQKWWQDPETRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +P       +  LP  V ++ F+  + +KIS S    +   E + +  
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGDYILPDNVPANEFLNLENDKISTSKNWAVWLHEYLVDFP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++  N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 EKQDVLRYVLTANAPETKDNNFMWKDFQEHNNSELVGVYGNFVNRALQLTKKYWNGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   ++D   +     + +++   +       A  + ++L    +RY    +PW++ KT
Sbjct: 419 CGELNDTDRQTIQEFKDIKEKVEAYLDVFKFREAQKEAMNLARIGNRYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P R  T+LY++++++  LAI  + F+P  + K+  ++ + + +       + LKPG  L
Sbjct: 479 DPKRVETILYISLQLVANLAIAFEPFLPFSSKKLRGMIGMENFDWSELGSIELLKPGAQL 538

Query: 500 HKT 502
           ++ 
Sbjct: 539 NEP 541


>gi|24374161|ref|NP_718204.1| methionyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|68566007|sp|Q8EDX2|SYM_SHEON RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24348665|gb|AAN55648.1|AE015703_10 methionyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 676

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 124/543 (22%), Positives = 232/543 (42%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      +I++D++  T  + +      ++ K+   G I  
Sbjct: 63  AQQLGMAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEQSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++D L  +  S     L  E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEDMLKEWTRSGA---LQTEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +        +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLYGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +         D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIT-----DT 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           ++  V     ++I E  + +   +A+ ++++L    + +     PW++ K     + A  
Sbjct: 415 TLTEVFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +        +   +  L Q +  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQ---QTLTWDGLGQDM-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|254671245|emb|CBA08498.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 717

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 35  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 95  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 274

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 275 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 334

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 335 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 394

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 395 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 451

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 452 --ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 509

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 510 ERLHEVCSELINAFTILTAYLAPVLPQTAANAARFLNLD----AITWANTRVTLGEHAIN 565

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 566 KYEHLMQR 573


>gi|168032815|ref|XP_001768913.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679825|gb|EDQ66267.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 811

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 114/559 (20%), Positives = 224/559 (40%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + +++A+ Y N  PH+G+    ++ ADV AR+ R  G +V++  GTDE+G      
Sbjct: 23  GKRNIMVTSALPYVNNVPHLGNIIGCVLSADVYARYCRRRGYNVIYMCGTDEYGTATETR 82

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+     RD+ +  DI +D F RT+  +  +  + ++  + +K  + +
Sbjct: 83  AMEEGLTPREICDKYHAIHRDIYEWFDIDFDKFGRTSTPQQTEIAQAIFMSLYEKKRLNE 142

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-------------------NPVQWMEE 162
                 Y      +  D  V           +                    NP   +  
Sbjct: 143 NTMIQPYCTTCNRFLADRLVEGTCPTPGCGYEDARGDQCDLCGKLLNADDLINPRCKVCG 202

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L       +                  +  ++++ GLK+  ++R  
Sbjct: 203 NTPEKRPTDHLFLDLPGLNDQLQSYINNTSKRGGWSSNSIQQTNAWIRDGLKERCITRD- 261

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P D   +  +GKD +
Sbjct: 262 LKWGVPVPLEKYKHKVFYVWFDAPIGYISITANYSPEWEKWWKS-PEDVELVQFMGKDNV 320

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FH + +P+ LL    P    K +    ++ ++  K SKS G  +   +V    + V+  
Sbjct: 321 PFHTVIFPSTLLGTEEPWTLMKTISVTEYLNYESGKFSKSRGVGVFGNDVKSTNIPVEVW 380

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----DYDGMIPTP 380
           RY+L+       D  +    L+ + N +L   +GN V R++S + K      +  ++P  
Sbjct: 381 RYYLLTNRPEVSDTLFTWVDLQAKQNNELLKNLGNFVHRTLSFLAKPLGEGGFGKVVPEV 440

Query: 381 GAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
           G   E +   ++       + E  ++M+   +   L   + + S  ++Y    + W+L K
Sbjct: 441 GNPEEHELTRNLAIKVKSTVDEYIKSMEAVKLKGGLKAAMQVSSLGNQYLQDSQFWKLYK 500

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-------DENRCFQSL-- 489
            +    + VL  +V ++  LA LL+ F+P  ++K+   L +        +EN   +    
Sbjct: 501 EDKPSCAIVLKTSVGLVHLLATLLEPFMPSFSHKVLAQLNLPVSTLSLVEENDELERAYK 560

Query: 490 -DQRLKPGFMLHKTFDPIF 507
               ++ G  +    +PIF
Sbjct: 561 PWMLVQSGHSIGSP-EPIF 578


>gi|147905173|ref|NP_001079984.1| methionyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
 gi|82187134|sp|Q6PF21|SYMC_XENLA RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|34785909|gb|AAH57757.1| MGC69150 protein [Xenopus laevis]
          Length = 905

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 120/549 (21%), Positives = 233/549 (42%), Gaps = 43/549 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  + + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 258 VEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATE 317

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+ +     +    +IS+D F RTT +      + ++ ++ ++  +
Sbjct: 318 TKAMEEGLTPQQICDKYNAIHTAIYQWFNISFDYFGRTTTQHQTTISQDIFHRLLEREFL 377

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                      + + +  D  V            +G          N V+  + +    +
Sbjct: 378 LTDTVEQLRCEKCQRFLADRFVEGICPFCNYEEARGDQCDKCGKLINAVELKKPQCKICK 437

Query: 169 LSA------YQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
            S       +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 438 QSPVIKSSKHLFLDLPKLEKRLEQWLEQSFSTGDWTSNARFITRSWIRDGLKPRCITRD- 496

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDIL 268
             WG  +P D     + YVW DA   Y++ T    +      K  P  +     + KD +
Sbjct: 497 LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWWKS-PQQVQLYNFMAKDNV 555

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P+ LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 556 PFHSVVFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGVGVFGDMAKDTGIPADIW 615

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN V+R+   + K ++G +P     +E
Sbjct: 616 RFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFFNGCVPEMELLSE 675

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            D+ +L+  +  LQ+    ++   I  AL  ++++    ++Y    +PW+  K N     
Sbjct: 676 -DKRLLAQVAAELQQYNLLLEKVRIRDALRCILNISRHGNQYIQVNEPWKCIKGNQQEQK 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPGFMLHK 501
           RA TV  V V +   L+I+L  ++P +++ I + L +  E++         L+ G  +  
Sbjct: 735 RAGTVTGVAVNMAALLSIMLHPYMPTISSVIQEQLLMPQESKVLTTDFCCCLQSGHQIGN 794

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 795 -VSPLFQKL 802


>gi|206560985|ref|YP_002231750.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|226710898|sp|B4E8E0|SYM_BURCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|198037027|emb|CAR52948.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 718

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 131/544 (24%), Positives = 227/544 (41%), Gaps = 48/544 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+ 
Sbjct: 18  RQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYIGADDTHGTPIMLRAEK 77

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +   
Sbjct: 78  EGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYLALQEAGLIAEREI 137

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y    E +  D  +             G + +   + + P + +             
Sbjct: 138 EQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPYSVVSGATPVR 197

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
              + YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR    
Sbjct: 198 KTSKHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPY 255

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKDIL 
Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKDILY 315

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + LRY+
Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
             +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N     
Sbjct: 432 HPLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAVALH 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
               V++E  R L++ L+  +P++A  +     +A     +    + L     + K +  
Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAAAVEAFFGIAP--LAWADAAKPLSSAQPI-KAYQH 548

Query: 506 IFPR 509
           +  R
Sbjct: 549 LMTR 552


>gi|326568654|gb|EGE18725.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 683

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 122/545 (22%), Positives = 219/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR    +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDAPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L K    D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLAPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFTP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|148377472|ref|YP_001256348.1| methionyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291518|emb|CAL58904.1| Methionyl tRNA synthetase (Methionine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 515

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 152/484 (31%), Positives = 258/484 (53%), Gaps = 7/484 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y   +  ++A + ++ G DV F TG+DEHGQKI + A 
Sbjct: 2   KKTFYITTPIYYTSGPLHIGHLYCTTVTWIIANYKKILGFDVKFLTGSDEHGQKIEQKAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            A    + + D+   +++ M    +I+YD F RT++ +H    + ++ K  + G IYKG 
Sbjct: 62  AANKDPQTYADELVDSYKKMWQKYNINYDYFSRTSDPKHMKMVQAIFSKFLELGFIYKGK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +   ++        Y+    + +  M EE YFF++  +Q+  L   E++
Sbjct: 122 YDGLYSVNDEEFLTKNQAVLKDGEYYHPVSGHKLVLMSEESYFFKMKEFQNWWLKEVENN 181

Query: 184 PEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           PE++LP +  NE+I +FV  GL+DLS++R   +WGIK  +DP++ +YVW+DAL NY++  
Sbjct: 182 PEWLLPAKMTNEMITNFVSEGLEDLSVTRTNINWGIKTNEDPKHTLYVWLDALFNYVSAL 241

Query: 243 GYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           G+       +   +  +    +H+IGK+I RFH IYW  F  +  + +P K+++HG +  
Sbjct: 242 GFDLENPSDEYLKYWQNGDEIVHIIGKEISRFHFIYWTIFTKALGIRIPTKIYAHGLLRD 301

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSL NVI+P  +  +   + ++Y+    I+ G+DG + +D L   +N++L N 
Sbjct: 302 KNGRKMSKSLNNVIEPEYLFSKYDDEMIKYYFASAISFGEDGNFSEDKLIDIINSELVNN 361

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNLVSR+V MI       +    +       I    +    +  E M    + +AL   
Sbjct: 362 YGNLVSRTVKMISNSSPEGLIYRQSSKIEHLEIEEKINSFSSKFIELMDEFRLDKALEYS 421

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++L   +++Y D  KPW L    + +    +L   +  I  ++  LQ  +P    ++   
Sbjct: 422 MNLSDALNKYIDMLKPWTLTAHEHKEELENILVRLLNGIYAVSWSLQIVMPNKITEVARA 481

Query: 477 LFVA 480
           L V 
Sbjct: 482 LNVN 485


>gi|326472661|gb|EGD96670.1| methionine-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 559

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 172/538 (31%), Positives = 261/538 (48%), Gaps = 61/538 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y++T I Y NA PHIGH Y ++IAD+L R+ R                       
Sbjct: 51  KPKPYYVTTPIFYVNAAPHIGHLYTILIADILKRWQR----------------------- 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                    F   N   F+ +A   + SYD FIRTT+  H    +  W+ ++ +G IY+G
Sbjct: 88  ---------FAIGNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYEG 138

Query: 123 CYSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWYS+ DE +Y    V+       G            V++ +E  Y F+LSA+QD+L
Sbjct: 139 KHEGWYSVSDETFYPASAVHSTLDPATGRKMMASIETGKEVKFSQETNYHFKLSAFQDRL 198

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L +Y  +P+FI P    + ++  V SGL+DLS+SR      WGI +P D    +YVW+DA
Sbjct: 199 LEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVDRLSWGIPVPGDTTQTIYVWLDA 258

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NY+T  GY   P   +   WPAD+HV+GKDI RFH IYWPAFL++ +LPLP+ + +H 
Sbjct: 259 LVNYITYAGYPFTPGREQESIWPADIHVVGKDITRFHCIYWPAFLMALDLPLPRTILTHA 318

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                  K+SKS GNV++P+  +   GVD +R++L        D  YD   + +     L
Sbjct: 319 HWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNIL 378

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG-------AFTESDESILSVCSRVLQEIRENMQN 407
             G+GNL SR +     +    +           A   S+   +    +V   +   M  
Sbjct: 379 QGGLGNLCSRVMRGKGWNVRESVVKMANGQGSRRAKDPSEIEHMEFLEKVPGLVSNQMDE 438

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAIL 461
               RAL +++ ++ + +RY  +  PW L K   T+P   D+   V+Y   E +R   IL
Sbjct: 439 LNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEASTDPTAHDQLVGVIYNATESLRIAGIL 498

Query: 462 LQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKP--GFMLHKTFDP----IFPRFL 511
           LQ F+P+ A K+ D+L V ++   R + + +    P  G             +FP  L
Sbjct: 499 LQPFMPEKAKKLLDMLGVEEDLSKRSYAAAEYGADPDYGTPRVPLGKGQAGTLFPPLL 556


>gi|289621749|emb|CBI51660.1| unnamed protein product [Sordaria macrospora]
          Length = 613

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 173/508 (34%), Positives = 274/508 (53%), Gaps = 34/508 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y++T I Y NA PH+GH Y M++ADVL R+ +L G   +  TGTDEHG K+ +AA
Sbjct: 60  DNKPFYVTTPIFYVNASPHVGHMYSMVLADVLKRWQKLKGNQAILCTGTDEHGTKVQRAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            +  +  K F D NS  F+++A    I +D FIRTT++ H +  +  W  + DKG IY+ 
Sbjct: 120 MSNDMDPKQFCDLNSAKFQELAAACLIDHDRFIRTTDQDHVEAVKHFWLLLKDKGLIYEA 179

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY------YNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + GWY + DE +Y + ++ K  D              N V+W+EE+ Y FR++A +D+L
Sbjct: 180 KHEGWYCVSDECFYPESQLEKRQDPFTGEVYVASIESGNKVEWIEEKNYHFRMTALKDQL 239

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           L +Y+++P++I+P  R N+V+ +V + L+DLS+SR      WGI++PDD    +YVW+DA
Sbjct: 240 LEFYKNNPDWIVPHTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDDESQTIYVWVDA 299

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L NYLT  GY                    +DILRFH IYWPA LL+ +LPLPK++ SH 
Sbjct: 300 LINYLTKAGYPTGLQDW-----------STQDILRFHCIYWPALLLALDLPLPKRILSHA 348

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               + +K+SKS+GNV++P   +E  G+D +R+++V       D  Y    L       L
Sbjct: 349 HWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMVHNGGISNDADYSNGWLTVEYKKHL 408

Query: 355 ANGIGNLVSRSV--------SMILKDYDGMIPTPGAFTESDE---SILSVCSRVLQEIRE 403
            NG+GNL +R            +    DG +       + ++     L+   ++   +  
Sbjct: 409 QNGVGNLSARVTRPKQWSLRRAVQSYNDGTMRLQSTGEQINDSCVEHLARLDKLASTVDN 468

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV---EVIRQLAI 460
            M       AL +++ L+ E + +    +PW + K  PD  + V  + +   E +R   I
Sbjct: 469 EMLQLNPSHALQKIMGLIGETNAFISNAEPWVVVK-KPDSEALVDRIILTAGESLRIAGI 527

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQS 488
           LLQ F+P+ A ++ D+L V ++ R F  
Sbjct: 528 LLQPFMPEKAAELLDLLGVENDKRTFSH 555


>gi|105893564|gb|ABF76729.1| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 800

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 132/547 (24%), Positives = 228/547 (41%), Gaps = 48/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 97  QGSRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLR 156

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +
Sbjct: 157 AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAE 216

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 217 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 276

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  S+       +   E  N++  +     +S L D  +SR 
Sbjct: 277 PVRKTSKHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRD 334

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKD
Sbjct: 335 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKD 394

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 395 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 454

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 455 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 510

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N  
Sbjct: 511 AMNHPLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAV 570

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                  V++E  R L++ L+  +P++A  +     +A     +    + L     + K 
Sbjct: 571 ALHETCSVSLEAFRLLSLALKPVMPRVAVAVEAFFGIAP--LAWADAAKPLSSAQPI-KA 627

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 628 YQHLMTR 634


>gi|238028342|ref|YP_002912573.1| methionyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877536|gb|ACR29869.1| Methionyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 718

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 127/539 (23%), Positives = 222/539 (41%), Gaps = 47/539 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 15  SSRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +++  R  +   D   IS+D+F  T    +      ++  + D G I +
Sbjct: 75  AEQEGITPKQLIERVWREHKRDFDSYAISFDNFYTTDSDENRVLSETIYLALKDAGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +   + + P + +          
Sbjct: 135 RDIEQAYDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FF+LS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHHFFKLSD--PRCENFLRGWVGGLAQPEATNKMREWLGEAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +        G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNHCEKLGLDFDAWTRPGSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K ++G +      +
Sbjct: 373 RYYFAAKLNATMEDLDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D  KPWE  K   N  
Sbjct: 429 AMNHPLLASLRGTIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWEQAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                  V++E  R L++ L+  +P++   +   L +A     + S+   L     ++ 
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVVEAVEAFLGIAP--LTWASVATPLSSTQPVNA 545


>gi|147766455|emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]
          Length = 652

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 124/565 (21%), Positives = 244/565 (43%), Gaps = 57/565 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G    
Sbjct: 16  VEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVLYICGTDEYGTATE 75

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     + +   D+  +  +++ D  DIS+D+F RT+  +H + C+ ++KK+ +   +
Sbjct: 76  TKAMEENCSPQQICDKYHKIHKEVYDWFDISFDEFGRTSIPQHTEVCQAIFKKLMENNWL 135

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYF 166
            +      Y    + +  D  V              +G   +      NP +  +     
Sbjct: 136 SENRMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKV 195

Query: 167 FRLS-------------AYQDKLLSYYESHPEF--ILPIERRNEVISFVKSGLKDLSLSR 211
            + +                   L  Y ++                +++K GL+   ++R
Sbjct: 196 CQSTPQIRDTDHLFLELPLLKDKLEEYINNMSIAGCWSQNAIQATYAWLKEGLRSRCITR 255

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 256 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITA-CYTPEWEKWWKNPENVDLYQFMGKD 313

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVD 323
            + FH + +P+ L+         K +    ++ ++  K SKS G  +   +V + ++  +
Sbjct: 314 NVPFHTVMFPSTLIGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDVKDTKIPAE 373

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +    L+ ++N +L N +GN ++R +S I K     Y   IP 
Sbjct: 374 VWRYYLLTNRPEVSDSLFTWVDLQAKLNTELLNNLGNFINRVLSFIAKAPGLGYGSSIPD 433

Query: 380 -PGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            PGA +    +++       L++  E M+   + + L   +S+ SE + Y    + W+L 
Sbjct: 434 APGAESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEGNGYLQESQFWKLY 493

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---CFQSLD---- 490
           K +    S V+  +V ++  L+ LL+ F+P  + ++   L +  E R   C ++ D    
Sbjct: 494 KEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDENGDLERA 553

Query: 491 ----QRLKPGFMLHKTFDPIFPRFL 511
               + L  G  +  T +P+F   +
Sbjct: 554 RKPWELLPAGHKMG-TPEPLFNELV 577


>gi|269114911|ref|YP_003302674.1| methionyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322536|emb|CAX37271.1| Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS)
           [Mycoplasma hominis ATCC 23114]
          Length = 521

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 170/517 (32%), Positives = 274/517 (52%), Gaps = 12/517 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  YI+T I YP+   HIGH     +A V   + +  G + LF TG DEHGQKI K A
Sbjct: 4   NKKTFYITTPIYYPSGNLHIGHLLTTTLASVYRNYKKQQGYETLFITGIDEHGQKIQKKA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T K +VD  S+ F D+  +L I YD +IRTT+  H +T + ++  +  KG IYK 
Sbjct: 64  LEQNITPKEYVDIQSQKFVDLWKLLKIDYDKYIRTTDDYHIETIQKVFYLMEQKGYIYKS 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y G YS+ DE +    +        Y+    + +Q ++EE YFF +S +   + SY+E 
Sbjct: 124 KYEGLYSISDEEFLTKTQAISKDGKFYHPISGHELQEVKEESYFFNMSKFTPWIKSYFEQ 183

Query: 183 HPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNY 238
           +P+FI       E + +F+  GL+DLS++R +FDWGIKI     + Q+I+YVW+DAL NY
Sbjct: 184 NPDFITNKATYKELMNNFINKGLEDLSITRVSFDWGIKIETKDAEKQHIIYVWLDALFNY 243

Query: 239 LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           L+  GY +         +  +    +H++ K+I RFHAIYWP FL S +L LP K+  H 
Sbjct: 244 LSALGYNNYLGQELYNKFWVNGNERVHLLAKEISRFHAIYWPIFLKSLDLNLPTKLVIHS 303

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +I+    K+SKS GNVI+PI +IE+ G + ++YF   +I    D  + ++ L   +NADL
Sbjct: 304 WIVTPEGKMSKSKGNVIEPIPLIEKYGAEPVKYFFASQINIDNDFSFSEELLINVLNADL 363

Query: 355 ANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN  GNL +R+  M++ +++      P      D+++ S       + ++   N    +A
Sbjct: 364 ANNFGNLANRTFKMVMLNFENGTTYCPNQLNSLDKNVYSEIENAYNDYKKYFDNFNADKA 423

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L + I L   ++ Y D  +PW+L K N  R + VL   +  I  + ++L   + +  + +
Sbjct: 424 LKRAIELSKFLNEYIDKNEPWKL-KENLPRLNVVLNTLLNGIYAVNMMLSVVLKEKCSIL 482

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L +++     + L    K         + +F R 
Sbjct: 483 LNDLQLSE--FSEKMLFNYFKFDNKKFSKPNILFERI 517


>gi|194476532|ref|YP_002048711.1| methionine--tRNA ligase [Paulinella chromatophora]
 gi|171191539|gb|ACB42501.1| methionine--tRNA ligase [Paulinella chromatophora]
          Length = 524

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 158/455 (34%), Positives = 237/455 (52%), Gaps = 7/455 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              ++T + Y N +PH+G AY  +  D LAR+ RL G  V+F TG DEHGQKI + A+ A
Sbjct: 2   TYTVTTPLYYVNDRPHLGSAYTTLACDALARYQRLIGKSVVFITGCDEHGQKIQRTAEAA 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  +   +Q S  +  +     IS D FIRTT+ RH    +  + ++   GDI +G   
Sbjct: 62  SLKPQESCNQVSEEYHHLWSRWQISNDRFIRTTDLRHQAIVKEFFLRVEKAGDILEGQQQ 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++    +G +          ++W +E   FF LS YQ   +      P 
Sbjct: 122 GWYCVACEEFKDEPVDAEGDN--QCAIHQRRLEWRDEPNLFFNLSRYQK-QIEELIQKPG 178

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FILP+ RR E+ + V  GL + S+SR    WGI +P    +  YVW DAL  YLT     
Sbjct: 179 FILPVSRRREIENLVAQGLHNFSISRINLPWGIPVPGHTDHTFYVWFDALIGYLTALLEP 238

Query: 246 DNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +P        + WPA++HVIGKDILRFHA+YWPA L+SA L +P  VF HGF+  +G+K
Sbjct: 239 SDPPELDIILRRGWPANVHVIGKDILRFHAVYWPAMLMSAGLEVPDMVFGHGFLTREGKK 298

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN++DP  ++EE G D++R++L+R+I  G+DG + K      +N DL+N IGNL+
Sbjct: 299 MGKSLGNILDPELLLEEYGRDSVRWYLLRDIPFGEDGDFQKKRFIDLINNDLSNTIGNLL 358

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R++SM  + +   +P          S+       +      +      RA    + L +
Sbjct: 359 NRTLSMARRWFANAVPDCREAVTDQHSLAKASQSAILINITALDKLEFRRAAEATLDLAA 418

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + + +   Q PW   K    R   V      V+  
Sbjct: 419 QANTFLSEQAPWSRIKQEGGR-EQVGADLYAVLET 452


>gi|158255150|dbj|BAF83546.1| unnamed protein product [Homo sapiens]
          Length = 900

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 440 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F R 
Sbjct: 797 -TVSPLFQRL 805


>gi|221065401|ref|ZP_03541506.1| methionyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220710424|gb|EED65792.1| methionyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 719

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 145/559 (25%), Positives = 237/559 (42%), Gaps = 61/559 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 4   RKLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKAAGFIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +  ++ + P   +             
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E   ++  +             GL D  +
Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQSGQHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPALEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P ++  HGF+  + GEK+SKS G  +DP++ +  ++  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   I K +DG     G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDG---RLG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +E  +++L+        I    + +   RA  +++ L  +V+ Y DA KPWEL K   
Sbjct: 421 VVSEDGQTLLAALREQQAAIVAAYEGRDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L   +P +A ++ + L V  E   F  + + L  G  +
Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVANFLIVPPER--FADVVKPLGAGHQI 538

Query: 500 -----------HKTFDPIF 507
                       K  + +F
Sbjct: 539 GVYQHLMQRVDPKQLEALF 557


>gi|20092839|ref|NP_618914.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|25009364|sp|Q8TIU5|SYM_METAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19918142|gb|AAM07394.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 712

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 123/539 (22%), Positives = 231/539 (42%), Gaps = 42/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N + HIGH    + AD+ AR  R +G +V F  G+D HG  I   A+ 
Sbjct: 11  KPVLVTCGLPYANGKAHIGHLRTYVPADIFARSLRKEGREVTFVCGSDTHGTPIVVNAEE 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  V+   ++F +    L + +D F  T +  +H+    +  ++ +K  +Y    
Sbjct: 71  LGITPKELVEIYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEKDYVYPKII 130

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y      +  D  V                                       P ++
Sbjct: 131 EIAYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHLEPGELQNPVCTICGGPAEY 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +E +FF+LS + D L+ Y     +       RN  + +VK GL D  ++R   +WG++
Sbjct: 191 RHQEHFFFKLSEFGDYLMDYLS--NDLGGTTNARNYALGWVKQGLTDWCITR-NLEWGVR 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T       G   + +       +H IG DI   H I+W
Sbjct: 248 FPGHEDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGEGEIVHFIGGDITYHHCIFW 307

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A+  +P  V + G +  + +K SK+ G V+   E  +      D LRY+L    
Sbjct: 308 PAMLNGADYSVPTAVVASGMVKIEDKKFSKTRGYVVWVGEDYLDHGFHPDLLRYYLASYT 367

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  K+  +    L++++NA+L   +GN + R++    K+Y  +        + +  + + 
Sbjct: 368 SHTKELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEVP-----EGKLEPEVSAE 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               L+E++E M      +A+   ++L S  + YF + +PW+L K +      V+Y  + 
Sbjct: 423 IEEALKEVKEAMAEYEFKKAVDSAMALASFGNTYFQSHEPWKLIKEDRSACGQVIYNCLH 482

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + L+++ +  +P+     +  L    +     ++     LK G  L K  + +F + 
Sbjct: 483 LAKALSLIFEPVLPQTMETAWKGLGQESDIHASRYEEALVPLKAGTKLAKP-ELLFTKL 540


>gi|328717976|ref|XP_003246352.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 736

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 235/550 (42%), Gaps = 45/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K+ + + +++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+ +GTDE+G    
Sbjct: 40  VKDEKNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGWNTLYISGTDEYGTATE 99

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    +T +   D+  +   ++    +IS+D F RTT ++  +  + ++K++   G  
Sbjct: 100 TKALEEKLTPQQICDKFFKIHNEIYKWFNISFDHFGRTTSQKQTEIVQEIFKEVHSNGYT 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                        + +  D  V            +G          N  + ++      +
Sbjct: 160 STASMEQLLCENCDRFLADRFVEGTCPLCNYEDARGDQCDGCGHLINATELIKPRCKVCQ 219

Query: 169 LS-------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            +                +  L+ +            +    S++K GLK+  ++R    
Sbjct: 220 KTPVIRSSQQLFLNLPKVEAKLNDWVDKSGDDWSYNAKVITKSWLKDGLKERCITRD-LK 278

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDI 267
           WGI +P +     + YVW DA   Y++ +           +  P D         + KD 
Sbjct: 279 WGIPVPLEDFKSKVFYVWFDAPIGYMSMSAAYTPDWRKWWQ--PEDDTKVTYYQFMAKDN 336

Query: 268 LRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FH++ +PA L +   N  +   + +  ++ ++  K SKS G  +   +  +  +  D 
Sbjct: 337 VPFHSVMFPACLFATERNYTMVNHIMATEYLNYEDGKFSKSRGVGVFGNDAQDTGLPADV 396

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+      +D  +    L  + N++L N +GN  +R++S + K +D +IP      
Sbjct: 397 FRFYLLFVRPESQDSSFSWADLATKNNSELLNNLGNFCNRALSFLEKFFDCVIPEI-QLG 455

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-- 442
             + ++L++ +R L+E    +    +   L  ++S+    ++Y   QKPW L K + +  
Sbjct: 456 NDELTLLALVTRDLKEYTSMLDKAKLRDGLRLILSISRHGNQYMQFQKPWVLIKGSSEEK 515

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-RLKPGFMLH 500
            RA TV+ ++  +   LA++LQ ++P+  N I   L V        +     L PG  + 
Sbjct: 516 IRAGTVIGLSCNLACLLAVMLQPYMPQTVNIIGKQLNVDISTFLLNNFVSVFLPPGHKIG 575

Query: 501 KTFDPIFPRF 510
           K   P+F + 
Sbjct: 576 KPA-PLFEKI 584


>gi|47222843|emb|CAF96510.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1242

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 119/552 (21%), Positives = 230/552 (41%), Gaps = 47/552 (8%)

Query: 2    KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            K+++ + +++A+ Y N  PH+G+    ++ ADV +R+ RL G +VL+  GTDE+G     
Sbjct: 595  KDKKNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYSRLRGWNVLYLCGTDEYGTATET 654

Query: 61   AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             A   G+T     D+       +     I +D F RTT ++  +  + ++ ++     + 
Sbjct: 655  KALEEGLTPLEICDKYHAVHAAIYKWFQIDFDFFGRTTTEKQTEIAQDIFWRLHKNDFLL 714

Query: 121  KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
            +           E +  D  V            +G          N ++  E +      
Sbjct: 715  EDTVEQLRCDNCERFLADRFVEGICPHCAFPEARGDQCDQCGRLINAIELKEPQCKVCRK 774

Query: 165  -YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
                R S +    L   E+  E                +    S+++ GLK   ++R   
Sbjct: 775  TPAIRSSKHLFLDLPKLETELEEWLDKSISTGDWTTNSKQITRSWLRDGLKPRCITRD-L 833

Query: 215  DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
             WG  +P +     + YVW DA   YL+ T    +      K  P  +   + + KD + 
Sbjct: 834  KWGTPVPHEDFKDKVFYVWFDAPIGYLSITANYTDEWEKWWKN-PTQVELYNFMAKDNVP 892

Query: 270  FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
            FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  +      + ++  D  R
Sbjct: 893  FHSVVFPCSLLGARDNYTLVNHLVATEYLNYEDTKFSKSRGVGVFGDMAKDTDIPCDVWR 952

Query: 327  YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            ++L+     G+D  +    L  + N++L N +GN ++R+   + K ++G +P      + 
Sbjct: 953  FYLLYVRPEGQDSSFSWTDLATKNNSELLNNLGNFINRAGMFVTKFFEGCVPA-MVLQQE 1011

Query: 387  DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDR 443
            D+ +L++    LQ+  + M    I  AL  ++++    ++Y    +PW+  K    +  R
Sbjct: 1012 DKKLLALVGWELQQYIQLMDRVKIRDALKHILNISRHGNQYIQINEPWKKIKGADADRQR 1071

Query: 444  ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-----LKPGFM 498
            A TV  V+V +   L+++L  ++P ++  I D L           +        L  G  
Sbjct: 1072 AGTVTGVSVNIACLLSVMLSPYMPIVSQTIRDQLNCPPNVLSAMLVGSGNFVCTLSAGHR 1131

Query: 499  LHKTFDPIFPRF 510
            +  T  P+F + 
Sbjct: 1132 VG-TVSPLFQKL 1142


>gi|316974847|gb|EFV58317.1| methionyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 975

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 133/550 (24%), Positives = 232/550 (42%), Gaps = 43/550 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G     ++ ADV +R+ RL G + L+  GTDE+G    
Sbjct: 11  VPGERNILITSALPYVNNYPHLGTIIGCVLSADVFSRYCRLRGYNTLYICGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT     D+     RD+ +  +I +D F RTT K+  +  + ++KKI D G  
Sbjct: 71  TKAIEEGVTPIQLCDKYYELHRDVYEWFNIKFDYFGRTTTKQQTEIAQHIFKKIYDAGFT 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEV---------------YKGADGQ----------YYNAQH 154
                   Y  + E +  D  V                    G                 
Sbjct: 131 TTKNVDQLYCEKCERFLADRFVEGECPFCGYEEARGDQCDKCGHLINAPELKLPKCKLCS 190

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN---EVISFVKSGLKDLSLSR 211
           +P      E  F  L   Q  L  Y E            N       ++K GLK+  ++R
Sbjct: 191 HPPIIRTSEHLFLDLPKLQLNLEKYLEEQWASSDCCWSHNAIAITKKWLKEGLKERCITR 250

Query: 212 KTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG  +P +     + YVW DA   YL+ T         K       +   H +GKD
Sbjct: 251 D-LKWGTPVPLENFSNKVFYVWFDAPIGYLSITANYTPEHWKKWWMDDKHVELYHFVGKD 309

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FH+I +PA L++ N      K + +  ++ ++  K SKS G  +      E  +  D
Sbjct: 310 NVPFHSIIFPATLIATNEQYCKVKNISATEYLNYESSKFSKSRGVGVFGNNARETGIPAD 369

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA- 382
             R++L+      +D  ++ D    +VN++L + +GN V+R++S + + + G+IP     
Sbjct: 370 VWRFYLLYTRPESQDAAFNWDDFALKVNSELLSNLGNFVNRALSFVERRFHGVIPEVDES 429

Query: 383 FTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
             + D   + +   +  L    +   N  +  ++  ++++    ++Y  +++PWEL K N
Sbjct: 430 LLDEDRLQAFIHNVNETLNNYIDCFDNLKLRDSVKCILNISRLGNQYMQSERPWELIKQN 489

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             +A +VL +   V+  LA L+   +P+++ KI   L +     C  S    LKPG  + 
Sbjct: 490 ERQAGSVLAIVANVVAILAALVHPIMPEISTKICKQLQLEKLVFC-SSFQFLLKPGHRIG 548

Query: 501 KTFDPIFPRF 510
           +    +F +F
Sbjct: 549 QVTT-LFVKF 557


>gi|153000977|ref|YP_001366658.1| methionyl-tRNA synthetase [Shewanella baltica OS185]
 gi|187647771|sp|A6WP56|SYM_SHEB8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|151365595|gb|ABS08595.1| methionyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 689

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 123/543 (22%), Positives = 234/543 (43%), Gaps = 48/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+ +++A+ Y N   H+GH  E I  D+ +R+ +L G +  +    D HG  I   
Sbjct: 3   TSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q ++  +      ++++D++  T  + +      ++ K+ D G I  
Sbjct: 63  AQQLGIAPEDMIAQVNKEHQQDFADFNVAFDNYHSTHSEENRLMASDIYLKLRDNGYIKS 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  +      +  D  V             G +     A ++P +            
Sbjct: 123 KSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDSCGATYSPTELINPKSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L +E  N++  + + GL+   ++R    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWTRSGA---LQVEMANKLDEWFEQGLQQWDITRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L          +FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNLCAKRPELSFDEFWGKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  +    P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K ++G +      T + E
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFNGKLAKINDTTLT-E 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           + L+        I +  +++   +A+ ++++L    + +     PW++ K     + A  
Sbjct: 419 AFLAK----QDVIADFYESREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQ 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + R L   L+  +P+LA  +     +      + +L Q L  G  +   F  +
Sbjct: 475 VCSNALNLFRILVTYLKPVLPRLAQDVEAFFQLP---LTWDALSQDL-AGHEI-APFKAM 529

Query: 507 FPR 509
             R
Sbjct: 530 MQR 532


>gi|330817988|ref|YP_004361693.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370381|gb|AEA61737.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 718

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 226/539 (41%), Gaps = 47/539 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 15  SSRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPIMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ K  +++     +   D   IS+D+F  T  + +      ++  + + G I +
Sbjct: 75  AEQEGLSPKQLIERVWGEHKRDFDSFGISFDNFYTTDSEENRVLSENIYLALKEAGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 135 RDIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELINPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FF+LS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHHFFKLSD--PRCENFLRGWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP------ADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L +  G   + W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLADRLGLDFEAWTRPGSTAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I+   VI+  +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGTKMSKSRGTFINAKSVIDTGMNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   +    + RVN+DL     N+ SR+   ++K ++G +      +
Sbjct: 373 RYYYAAKLNATMEDLDLNLADFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +L+     + +I  + + +   RAL Q + L   V+ Y D  KPWE  K   N  
Sbjct: 429 AMNHPLLASLREAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWEQAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                  V++E  R L++ L+  +PKL   +   L +A     + S    L     +H 
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPKLVEAVEAFLGIAP--LSWASAATPLSSTQPIHA 545


>gi|226944041|ref|YP_002799114.1| methionyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511555|sp|C1DEF4|SYM_AZOVD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226718968|gb|ACO78139.1| methionyl-tRNA synthetase, class Ia [Azotobacter vinelandii DJ]
          Length = 681

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 219/545 (40%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MPEARQILVTSALPYANGSIHLGHMLEYIQTDIWVRFQKQRGNQCVYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               + +D++  T  + +      ++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIAYVQAEHSADFADFLVDFDNYHSTHAEENRALSEAIYLRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------- 162
               + ++      +  D            E   G + +   A + P +  +        
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPKCGAEDQYGDNCEKCGATYEPTELKDPRSAISGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + +FF+L  ++  L  +  S     L     N++  ++  GL++  +SR    
Sbjct: 181 TPVLKDSKHFFFKLPDFEAMLKEWTRSGT---LQEAVANKIAEWLDGGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IPD+P    YVW+DA   Y+ +   L           FW  D      H IGKDI+
Sbjct: 238 FGFEIPDEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWCKDSKAELYHFIGKDIV 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++    D   + +   ++VN+DL   + N+ SR    I K   G++       E  
Sbjct: 358 YASKLSRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGLMVDANPEPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAS 445
             +          I E  + +   RA+ ++++L    + +   + PW L K         
Sbjct: 416 --LWEAFQVAAPAIAEAYEGRDFGRAMREIMALADRANAWIADKAPWALNKQEGKQTEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +    + + RQL I L+  +P LA      L VA     +Q    RL     L+  F P
Sbjct: 474 EICAFGINLFRQLVIFLKPVLPNLATAAEAFLNVAP--LTWQDHTLRL-ANHPLN-PFTP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|294507570|ref|YP_003571628.1| methionyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343898|emb|CBH24676.1| methionyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 712

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 132/571 (23%), Positives = 246/571 (43%), Gaps = 65/571 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
              E+L ++ A+ Y N   HIGH A   + AD+  R+ RL G DV F  G+DE G  I  
Sbjct: 5   TSSERLLVTAALPYANGPIHIGHLAGAYLPADLFVRYQRLKGEDVAFICGSDEMGVAILM 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +  +D      RD  +   +S+D + RT+ + H +T +  ++ + + G   
Sbjct: 65  RAIREDRTPEDIIDTYHPQIRDNFERFGMSFDYYGRTSSETHTETTQDFFRVLDENGGFD 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
                  Y    E +  D  V             G   +   +  +P +           
Sbjct: 125 LKTDEQLYDPEAEMFLADRFVIGTCPVCGFEEAYGDQCEQCGSSLSPTELQNPQSTLTDA 184

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
              + E   ++  L   Q +L  +  SHPE+        ++ S+   GLK  +++R    
Sbjct: 185 TPEFKETTHWYLPLGELQPQLEEWIGSHPEWK--NNVVGQIQSWFDEGLKGRAITRD-VP 241

Query: 216 WGIKIPDD---------PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD----- 259
           WG+ +PDD            ++YVW DA   Y++ T     +  +      +  D     
Sbjct: 242 WGVPVPDDVAERHGLEAEGKVIYVWFDAPIGYISATKEWAAEQGEPDAWADYWQDEDTRL 301

Query: 260 LHVIGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +H IGKD + FH + +P+ L+   +  LP  V ++ F+  +GEK+S S G  +   E ++
Sbjct: 302 VHFIGKDNIVFHCLMFPSMLMEHGDYVLPDNVPANEFLNLEGEKLSTSRGWAVWLHEYLD 361

Query: 319 EVG-----VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +        D LRY L   +   KD  +  +G ++RVN +LAN  GN V R+++   + +
Sbjct: 362 DFADERHAPDLLRYALATTLPETKDADFSWEGFQQRVNGELANVFGNFVHRTLTFAQRYF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           DG +P     +E+D ++L   + V   +    +      A+ + ++L    ++YF+  +P
Sbjct: 422 DGTVPPLEDPSEADRAMLDRMAEVPDTVGAAYEEHRTRDAVFETMALARRGNKYFNDTEP 481

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----------ADE 482
           W   +++P   +  ++V+++V   L+IL +  +P  A  + + + +             +
Sbjct: 482 WHTHESDPQACANTIHVSLQVCAALSILFEPVLPSAAATLRERIGLENVRTSTPDDDPAD 541

Query: 483 NRCFQSLDQRLKP-GFMLHKT--FDPIFPRF 510
              ++     L P G  +      +P+F + 
Sbjct: 542 AVGWEDAGAPLLPAGHPIPSGPDPEPLFQKI 572


>gi|187923016|ref|YP_001894658.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187714210|gb|ACD15434.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 711

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 133/519 (25%), Positives = 220/519 (42%), Gaps = 45/519 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPIMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I  
Sbjct: 74  AEKEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRILSENVYLALKEAGLIDA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 RDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++  +    +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PIRKTSTHYFFRLSD--PRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSTAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L+     + +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMQHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V++E  R L++ L+  +PKLA  +   L V  
Sbjct: 488 ALHETCTVSIEAFRLLSLALKPVLPKLAEAVEGFLGVEP 526


>gi|284172357|ref|NP_001165053.1| methionyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
          Length = 910

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 121/550 (22%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 262 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATE 321

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+     IS+D F RTT  +     + +++++  +G +
Sbjct: 322 TKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 381

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +         R   +  D  V            +G          N ++  + +     
Sbjct: 382 LRDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICR 441

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R S +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 442 SCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD- 500

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   Y++ T         K    P  +     + KD +
Sbjct: 501 LKWGTPVPLEGFEDKVFYVWFDATIGYVSITA-NYTDQWEKWWKNPEQVDLYQFMAKDNV 559

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P  +L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 560 PFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIW 619

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T 
Sbjct: 620 RFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMALTP 678

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 679 DDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQ 738

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +++ I   L +          S    L  G  + 
Sbjct: 739 RAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRILATSFICTLPAGHRIG 798

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 799 -TVSPLFQKL 807


>gi|326559611|gb|EGE10025.1| methionyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326565529|gb|EGE15700.1| methionyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567709|gb|EGE17815.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326568781|gb|EGE18851.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326575031|gb|EGE24960.1| methionyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 683

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 122/545 (22%), Positives = 219/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR    +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDAPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L K    D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLAPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFTP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|187649792|sp|Q2T087|SYM_BURTA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 718

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 134/548 (24%), Positives = 230/548 (41%), Gaps = 51/548 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRKTSTHHFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
            ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N  
Sbjct: 429 ATNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGF 497
                  V++E  R L++ L+  +P++A  +   L +     AD N+   S +Q ++   
Sbjct: 489 ALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSS-EQPIRAYQ 547

Query: 498 MLHKTFDP 505
            L    DP
Sbjct: 548 HLMTRVDP 555


>gi|326528397|dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 115/559 (20%), Positives = 225/559 (40%), Gaps = 57/559 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 18  GRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 77

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+      ++    DI +D F RT+     + C+ ++ K+ +   + +
Sbjct: 78  ALEEKCSPKEICDKYHVIHDEVYKWFDIKFDKFGRTSAPEQTEVCQAIFHKLMENKWLTE 137

Query: 122 GCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEG---- 164
                 Y    E +  D              E  +G   +  +   NP + ++ +     
Sbjct: 138 NTMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 197

Query: 165 --YFFRLSAYQDKLLSYYESHPEF---------ILPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L                  +          +++K GLK   ++R  
Sbjct: 198 NAPRIRDTDHLFLELPLLSDKLVNYINNTSVAGMWSQNAIQATNAWLKEGLKQRCITRD- 256

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD +
Sbjct: 257 LKWGVPVPHEKYKDKVFYVWFDAPIEYISITASYTPDWEKWWKD-PDNVELFQFMGKDNV 315

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +     +  +  
Sbjct: 316 PFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKITNIPSEVW 375

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT-- 379
           RY+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD +IP   
Sbjct: 376 RYYLLMNRPEVSDTLFTWVDLQAKLNSELLNNLGNFINRVLSFVAKPAGGGYDSIIPDAP 435

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                    ++    ++ ++   E M+   + + L   +++ S+ + Y    + W L K 
Sbjct: 436 NAESHPLTNTLAEKTNKWVEHYLEAMEKVKLKQGLKSAMAISSDGNAYLQESQFWRLYKE 495

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF----------QS 488
           +P   + V+  +V V+  LA LL+ F+P  + ++   L +  DE+  F          + 
Sbjct: 496 DPATCAIVMKTSVGVVYLLACLLEPFMPSFSREVLHQLNMSPDEDLSFCDDKGETAKAKR 555

Query: 489 LDQRLKPGFMLHKTFDPIF 507
               +  G  + K   P+F
Sbjct: 556 PWDFVSAGHKIGKPV-PLF 573


>gi|312890801|ref|ZP_07750330.1| methionyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296584|gb|EFQ73724.1| methionyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 688

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 135/527 (25%), Positives = 232/527 (44%), Gaps = 40/527 (7%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+ +  ++  I+ A+ Y N   H+GH A   I AD+ AR+ RL   DV+F  G+DEHG  
Sbjct: 1   MEPKTYKRYTITAALPYANGPKHLGHLAGAYIPADLYARYLRLQKRDVVFVCGSDEHGTA 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           IA  A     T +  +D+     +   + + IS+D + RT++  HH T +  +  ++DKG
Sbjct: 61  IANQAMKEHTTPRAIIDKYHELIKVSFEQIGISFDIYHRTSDPIHHQTAQDFFTNLNDKG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
              +     +Y     A+  D  +             G   +      +P + +      
Sbjct: 121 IFVEKEEEQYYDEHAGAFLADRYIIGTCPNCGNENAYGDQCEKCGTSLSPEELIHPRSTL 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L  Y+D L  +               +  S++  GL   +++R 
Sbjct: 181 SGNKPILKPTKHWYLPLDQYEDWLKEWILKDHAKDWRATVYGQCKSWIDGGLHPRAVTRD 240

Query: 213 TFDWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265
             DWGI   +P     ++YVW DA   Y++ T      +    K +  D     +H IGK
Sbjct: 241 -LDWGIKVPVPGADGKVLYVWFDAPIGYISATKQWALDNDKDWKLYWQDEESKLVHFIGK 299

Query: 266 DILRFHAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV-- 322
           D + FH I +P       +  LP  V ++ F+  +G+K+S S G  ++  E +E++    
Sbjct: 300 DNIVFHCIVFPVMLKAHGDFILPDNVPANEFMNLEGDKMSTSRGWSVEMHEYLEDLPAKV 359

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LRY+L        D  +     + RVN +L   +GN V+R + ++ K YDG +    A
Sbjct: 360 DELRYYLTAIAPETSDSEFTWKDYQARVNNELVAILGNFVNRVMILMHKFYDGRVEAETA 419

Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
               +DES+ +   +   E++ N +     +A   ++ +    +RY   ++PW+  KTNP
Sbjct: 420 TIDLTDESLKAQIGQFYDELQANFEGYKFRQAQQTMMEIARLGNRYLTEKEPWKSIKTNP 479

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           D A   L+  + +I  LA  LQ F+P  A KI  +L    +   F  
Sbjct: 480 DDAKAALHNCLVLIVHLATCLQPFLPGTAKKILHMLNWPKDVIAFDE 526


>gi|218960775|ref|YP_001740550.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729432|emb|CAO80343.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 678

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 130/543 (23%), Positives = 246/543 (45%), Gaps = 46/543 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  +++A+ Y N + HIGH A   + AD+  R+ RL G DV++  GTDEHG  I+  A  
Sbjct: 2   KYLVTSALPYANGKLHIGHLAGAYLPADIFVRYLRLKGEDVIYICGTDEHGTPISITADK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V+    + +   + + I +D+F  T+   H+      + ++ +KG I     
Sbjct: 62  EGITPQEVVNYYHNSIKKAFEGIGIEFDNFSGTSRPPHYKLAADFFLQLYNKGYIKPKNT 121

Query: 125 SGWYSLRDEAYYNDDEVYKGA--------------------------DGQYYNAQHNPVQ 158
             +Y  +D+ Y  D  V                              + +       PV 
Sbjct: 122 LQFYCEKDKRYLPDRYVEGICPLCGFEDARGDQCDKCGQIYETTTLIEPKCKICGSTPVI 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E + +F +L  +++KL  +  +   +      RN ++  +  GL + S++R    WG+
Sbjct: 182 K-ETKHWFLQLEGFREKLKRWLATKDYWK--ENVRNFILGLLDQGLVERSVTRD-LSWGV 237

Query: 219 KI--PDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
            +  P+    ++YVW DA   Y++ T           K K +  +     +H IGKD + 
Sbjct: 238 PVPLPEAKGKVLYVWFDAPIGYISATVEWAEKIGQPEKWKEYWLNPETRLIHFIGKDNII 297

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH++ WP+ L+  +    LP  + ++ F+  +G+KIS S    I   E I++   + LRY
Sbjct: 298 FHSLIWPSMLMGQDTIYCLPYDIPANEFMNLEGKKISTSKNWAIWVDEFIQDFDSEYLRY 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L       +D  +     + ++N +L N +GNL +R  +   K+++G I        ++
Sbjct: 358 YLAVNAPERQDSDFSFKDFQNKINIELNNTLGNLANRVFAFANKNFEGKITACALSETAN 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           ++I +   ++L+EI EN  N  + +    ++ +    +RYFD  KPW   K N D  +  
Sbjct: 418 KAI-AEADKLLKEIEENYLNYQVKKNTRLIMDIARLGNRYFDENKPWAQLKENRDATNET 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           LYV   ++ ++++     +P+    +  ++ + D+N  F      L  G ++     P+F
Sbjct: 477 LYVCSNLLAKISVAFSPIMPRSMRYLRQMMNL-DDNCKFSEAYNLL--GDIVLNEIKPLF 533

Query: 508 PRF 510
            + 
Sbjct: 534 RKI 536


>gi|282880479|ref|ZP_06289186.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305582|gb|EFA97635.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 687

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 128/551 (23%), Positives = 243/551 (44%), Gaps = 44/551 (7%)

Query: 1   MKERE--KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+E++  +  ++ A+ Y N   HIGH A   + AD+ AR+ RL   +V+F  G+DEHG  
Sbjct: 1   MEEKKFKRTTVTAALPYANGGVHIGHLAGVYVPADIYARYLRLKNQEVIFIGGSDEHGVP 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I   A+  G+T +  VD+     +   +   IS+D + RTT K H       +KK+ ++G
Sbjct: 61  ITIRAKKEGITPQDVVDRYHSMIKKSFEEFGISFDVYSRTTSKTHEQLASDFFKKLLEEG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---- 162
            + +     +Y      +  D  +             G   ++     +P++ +      
Sbjct: 121 KLQEQESEQYYDEEAHQFLADRYIKGECPHCHYDGAYGDQCEHCGTALSPLELINPTSTL 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
                     + ++  L+ YQ  L  +     +         +  S++   L+  +++R 
Sbjct: 181 SGSKPVIKKTKNWYLPLNDYQQWLKEWILQGHKEWR-SNVYGQCKSWLDLDLQPRAMTRD 239

Query: 213 TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHV 262
             DWGI +P +     ++YVW DA   Y++ T  L      +    + W  D     +H 
Sbjct: 240 -LDWGIPVPVEGAEGKVLYVWFDAPIGYISNTKELCEQAPERWGSWEKWWKDEDTRLVHF 298

Query: 263 IGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH + +P          LP  V ++ F+  + +KIS S    +   E + ++ 
Sbjct: 299 IGKDNIVFHCLIFPTMLKAHGGYILPDNVPANEFLNLENDKISTSRNWAVWLHEYLVDLP 358

Query: 322 --VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              D LRY L       KD  +     ++  N++L    GN V+R++ +  K ++G++P 
Sbjct: 359 GKQDVLRYVLTANAPETKDNNFTWKDFQEHNNSELVGIYGNFVNRALQLTKKYFEGVVPA 418

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   + D+  L     V Q++   +       A  + ++L    ++Y    +PW++ KT
Sbjct: 419 CGELLDIDKQTLEEFKDVKQKVETLLDAFRFRDAQKEAMNLARIGNKYITECEPWKVWKT 478

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           NP+R  T+LYV+++++  LAI  + F+P  + K+  ++ +   +         LK    L
Sbjct: 479 NPERVKTILYVSLQLVANLAIAFEPFLPFSSKKLRQLINMDTCDWSQLGSTDLLKANHHL 538

Query: 500 HKTFDPIFPRF 510
            +  + +F + 
Sbjct: 539 AEP-ELLFEKI 548


>gi|319940893|ref|ZP_08015231.1| methionyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805609|gb|EFW02397.1| methionyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 685

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 142/552 (25%), Positives = 235/552 (42%), Gaps = 51/552 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R KL+++TA+ Y N   H+GH  E I AD+  R  R+ G  V F    D HG  I  
Sbjct: 1   MKQR-KLFVTTALPYANGAFHMGHIMEYIQADIWVRHERMCGHIVHFVGADDVHGAPIMI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G+T + FV + +   +   +   IS+D +  T    +H+  + +++++ + G IY
Sbjct: 60  AAQKRGLTPQAFVAEIAAGRKQYLEGFHISHDYWGSTDSPENHELSQEIYRRLKNAGLIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y      +  D  +             G + +  +A ++P + +         
Sbjct: 120 TKDVEQFYDTVKGMFLADRFIKGTCPRCGAPDQYGDNCEKCSAVYSPTEVINPYSTLSGS 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNE-------VISFVKSGLKDLS 208
                    YFF+LS  +        +       + R  E               L D  
Sbjct: 180 RPELRTSTHYFFKLSDPECVKFLREWTTGNGKDGLPRVQEEVLAKDSEWLGTDGHLTDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVI 263
           +SR    +GI IPD P    YVW+DA   YL          G     + +D     +H I
Sbjct: 240 ISRDAPYFGIAIPDAPGKYFYVWLDAPVGYLAALKAYSEKKGFDFNEFLSDPETEQVHFI 299

Query: 264 GKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EV 320
           GKDI+ FH ++WPA L  +  P   P  + +HGF+   G+K+SKS G  I P++ ++  +
Sbjct: 300 GKDIIYFHTLFWPAMLHFSGKPFRTPDHINAHGFMTVDGQKMSKSRGTGISPLQYLDLGM 359

Query: 321 GVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LRY+L     +  +D  + K    +RVN+DL     N+ SR+   I+K ++G I  
Sbjct: 360 NAEWLRYYLAAKMNSRVEDVDFTKVDFAQRVNSDLIGKYINIASRAAGFIVKRFEGRILD 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                     ++      + E+    + +   RA   V+ L   V+ Y D +KPWEL K 
Sbjct: 420 AAMKDP----LIERIKSRVPEVSAFYEVREFARATRLVMELADAVNEYVDEKKPWELAKD 475

Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
               +    V  V +E  R L + L+  +P  A ++   L +A     + S  + L    
Sbjct: 476 PAQAEALHWVSSVALECFRLLTLCLKPVLPATAERVEAFLSIAP--LAWASAAKPLSSVN 533

Query: 498 MLHKTFDPIFPR 509
            + K +  +  R
Sbjct: 534 SI-KPYQHLMQR 544


>gi|332039844|gb|EGI76239.1| methionyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 705

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 144/545 (26%), Positives = 231/545 (42%), Gaps = 42/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N   HIGH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MPMPRKLFVTTALPYANGNFHIGHIMEYIQADIWVRFQRMRGHEVHFVGADDAHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +   +   D   I++D++  T    +H   + +++ +   G I 
Sbjct: 61  AAEKAGKTPQQFVADIAAGRKPYLDGFHIAFDNWSSTDSPENHALSQAIYRDLKAAGLIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                 +Y  +   +  D  +             G   +   A + P +           
Sbjct: 121 TKTIEQFYDPQKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-----GLKDLSLS 210
                  E YFF+LS  +        +    +           F K      GL D  +S
Sbjct: 181 TPVLKSSEHYFFKLSDPRCLEFLQNWTQDGKLQTEVANKIREWFTKDADGKGGLGDWDIS 240

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGK 265
           R    +GI+IPD P    YVW+DA   YL +        G   + + AD     +H IGK
Sbjct: 241 RDAPYFGIEIPDAPSKYFYVWLDAPVGYLASLKNYLGKIGIDYERYIADPAVEQVHFIGK 300

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGVD 323
           DI+ FH ++WPA L  +    P +V  HGF+  + GEK+SKS G  +DP++ +   +  +
Sbjct: 301 DIVYFHTLFWPAMLHFSGRKTPNQVNVHGFLTVNNGEKMSKSRGTGLDPLKYLSLGMNPE 360

Query: 324 ALRYFLVREIA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            LRY+L  +++   +D  ++++    RVN+DL     N+VSR+   + K + G +    +
Sbjct: 361 WLRYYLAAKLSGKNEDIDFNREDFMLRVNSDLIGKYVNIVSRAAGFLSKRFGGRLTQ--S 418

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--N 440
           F     ++L         +      +   +AL  +++L   V+ Y D  KPWEL K   N
Sbjct: 419 FDAQGAALLQDIHAAAPALAALYDGRDYGKALRDIMALADRVNGYTDEHKPWELAKDPLN 478

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             R   V  V V     L   L   +P LA ++  +  +       Q     ++P   L 
Sbjct: 479 DARLHQVCSVLVNAFAALTRYLTPVLPALARQVETLTGLPMGRWDVQQSVAAIQPYQHLM 538

Query: 501 KTFDP 505
           +  DP
Sbjct: 539 QRVDP 543


>gi|300088361|ref|YP_003758883.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528094|gb|ADJ26562.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 556

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 150/538 (27%), Positives = 238/538 (44%), Gaps = 38/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E++YI  A  Y N + H+GH A   + AD+ AR+HR  G +VL  TG+D HG  +   A+
Sbjct: 3   ERIYIGAAWPYANNRLHLGHVAGAYLPADIFARYHRTRGSEVLMVTGSDRHGTPVTIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G +     D     F +    L I++D +  T    H +  + ++ K+ +K  +YK  
Sbjct: 63  AEGKSPAEVADYYHAKFVENWSALGITFDLYTHTGTDNHREVVQDIFLKLLEKDHLYKET 122

Query: 124 YSGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPV-----------------Q 158
            S  Y      +  D  V          GA G   +A   P+                 +
Sbjct: 123 VSQPYCASCRRFLPDRYVEGTCPACGADGARGDQCDACGKPMNPSDLINIRCKLCGASPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F RLSA++  LL + E+  +   P  RR     ++K GL+D +++R    WGI
Sbjct: 183 FRETEHFFLRLSAFEKPLLDWIETQADHWRPSVRR-FTYQYLKDGLRDRAITRD-ITWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRF 270
            +P D      +YVW +A+  Y               +  KFW  D    + IGKD + F
Sbjct: 241 PVPLDGYDDKRIYVWFEAVIGYLSASKEWAQRSGNPEAWRKFWQEDCKTYYFIGKDNIPF 300

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+    L LP  V ++ F+  + +K+SKS    I   + +     DALRY L
Sbjct: 301 HTIIWPAILMGYGGLNLPYDVPANEFLTVEAQKLSKSRNIAIWLEDFLSRYQADALRYVL 360

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +      +R N +L    GNLV+R +SMI K + G +P PG   E   +
Sbjct: 361 SVNMPDTSDTDFSWREFVRRNNDELVATWGNLVNRVLSMIQKHFAGRVPEPGELDERSNA 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +++     L  + E +       A+   ++L +E +RY D + PW+  KT+   A+  LY
Sbjct: 421 VIARAEATLNTMDEMLHACRFREAIKTAMALAAEANRYLDEKSPWKTVKTDKAAAAQALY 480

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + VI  L      F+P  + K+   L             +R +PG  L+   + +F
Sbjct: 481 TALTVISGLRTAFYPFLPFSSEKLHGFLGYEGTVEADGWSLRRPEPGAGLN-PPEALF 537


>gi|134296619|ref|YP_001120354.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|187647710|sp|A4JGW6|SYM_BURVG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134139776|gb|ABO55519.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 721

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 130/536 (24%), Positives = 220/536 (41%), Gaps = 47/536 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   A+ 
Sbjct: 18  RQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLRAEM 77

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +   
Sbjct: 78  EGLTPKQLIDRVWAEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALKENGLIAEREI 137

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y    E +  D  +             G   +   + + P   +             
Sbjct: 138 EQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTDLLNPYSVVSGATPVR 197

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
                +FFRLS    +  S+       +   E  N++  +     ++ L D  +SR    
Sbjct: 198 KTSTHHFFRLSD--PRCESFLRDWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPY 255

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKDIL 
Sbjct: 256 FGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERKGINFDAWVRPGATAEQYHFIGKDILY 315

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + LRY+
Sbjct: 316 FHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYY 375

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +  +
Sbjct: 376 FAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----SAMN 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRAS 445
             +++     +  I  + + +   RAL Q + L  EV+ Y D  KPWEL K   N     
Sbjct: 432 HPLVAKLRSAIDSIAAHYEAREYSRALRQTMELADEVNAYVDGAKPWELAKDPANAVALH 491

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               V++E  R L++ L+  +P++A  +     +A     +    + L     ++ 
Sbjct: 492 ETCSVSLEAFRLLSLALKPVMPRVAQAVEAFFGIAP--LAWADAAKPLSSAQPINA 545


>gi|51491852|ref|NP_001003913.1| methionyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|81884328|sp|Q68FL6|SYMC_MOUSE RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51260910|gb|AAH79643.1| Methionine-tRNA synthetase [Mus musculus]
          Length = 902

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 121/550 (22%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 262 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATE 321

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+     IS+D F RTT  +     + +++++  +G +
Sbjct: 322 TKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 381

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +         R   +  D  V            +G          N ++  + +     
Sbjct: 382 LRDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICR 441

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R S +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 442 SCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD- 500

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   Y++ T         K    P  +     + KD +
Sbjct: 501 LKWGTPVPLEGFEDKVFYVWFDATIGYVSITA-NYTDQWEKWWKNPEQVDLYQFMAKDNV 559

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P  +L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 560 PFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIW 619

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T 
Sbjct: 620 RFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMALTP 678

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 679 DDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQ 738

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +++ I   L +          S    L  G  + 
Sbjct: 739 RAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRILATSFICTLPAGHRIG 798

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 799 -TVSPLFQKL 807


>gi|167835830|ref|ZP_02462713.1| methionyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 718

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 131/547 (23%), Positives = 225/547 (41%), Gaps = 49/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G ++ +    D HG  +   
Sbjct: 15  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 75  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +     + P   +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAA 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 195 PVRRTSTHYFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCEQRGIDFDAWINKDSTTEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N  
Sbjct: 429 AMNHPLVATLRDAIAQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPVNAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ----SLDQRLKPGFM 498
                  V++E  R L++ L+  +P++A  +     +A           S +Q ++    
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVLPRVAEGVEAFFGIAPLTWADAGKPLSSEQPIRAYQH 548

Query: 499 LHKTFDP 505
           L    DP
Sbjct: 549 LMTRVDP 555


>gi|194290515|ref|YP_002006422.1| methionyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|226710902|sp|B3R678|SYM_CUPTR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|193224350|emb|CAQ70361.1| methionine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 688

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 133/544 (24%), Positives = 222/544 (40%), Gaps = 47/544 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+ 
Sbjct: 4   RRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D++  T  + + + C  ++  +  +  I +   
Sbjct: 64  EGITPKALIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKAEDLIAEREV 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE---------- 163
             +Y      +  D  +             G   +     + P                 
Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVR 183

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG----LKDLSLSRKTFD 215
                YFF+LS  + +         +   P             G    L D  +SR    
Sbjct: 184 KSSAHYFFKLSDPRCESFLREWVA-DLAQPEAANKMQEWLGAEGEASTLSDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W  P       H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFKNLAQQRGIDFDAWVGPHSTAEQYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + LRY+
Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYY 362

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  A  +D   + D    RVN+DL     N+ SR+   ++K +DG +          
Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFDGKVDEAALAHP-- 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
             +L        ++    +++   +AL  V+ L   V+ + D +KPWEL K +  RA+  
Sbjct: 421 --LLEQLREAAPQVAHLYESREYSKALRLVMELTDAVNAFVDTEKPWELAKDDGKRAALH 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
               V++E  R L I L+  VP +A  +   L VA     ++++DQ+L     + + +  
Sbjct: 479 AACSVSLEAFRLLTIYLKPVVPNVAAGVERFLNVAP--LDWRAIDQQLSAASPV-QPYQH 535

Query: 506 IFPR 509
           +  R
Sbjct: 536 LMTR 539


>gi|156742957|ref|YP_001433086.1| methionyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|187647762|sp|A7NND5|SYM_ROSCS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|156234285|gb|ABU59068.1| methionyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 592

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 135/575 (23%), Positives = 250/575 (43%), Gaps = 72/575 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + ++ A  Y N   H+GH A   + ADV AR+HRL G   L  +G+D HG  I  AA+
Sbjct: 3   DTILVAVAWPYANGPFHVGHIAGAYLPADVFARYHRLRGHRTLMVSGSDCHGTPITIAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  + +    F      L IS+D F +T    H+     ++ ++ + G +YK  
Sbjct: 63  REGITPQDVIRRYHPTFLKTFQALGISFDLFTQTYTDNHYRVTTDMFLRLLENGYLYKET 122

Query: 124 YSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN-----------------PVQ 158
             G YS     +  D  V        Y  A G   ++  +                 PV 
Sbjct: 123 MVGSYSETLGRFLPDRFVEGTCPNCGYPRARGDQCDSCGHLHDPQDLIAPRSVLDGAPVT 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F  L+  + +L ++ ES               ++++ GL+  +++R   +WG+
Sbjct: 183 FRETEHFFLDLAKLEPQLRAWIESVDRSYWRANTLLFTQNWLREGLRGRAITRD-LEWGV 241

Query: 219 KIPDDP----QYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPA----------DLHV 262
            +P D        +YVW DA+  Y + +             K W              + 
Sbjct: 242 PVPVDDPAFKDKRIYVWFDAVIGYYSASVEWAERTGAPDAWKDWWVCLPDGSAPARSYYF 301

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I WPA L+   NL LP  V ++ F+  +G+K+S S    +   E+ +   
Sbjct: 302 IGKDNIPFHTIIWPAMLIGYGNLALPYDVPANEFLNLEGDKMSTSRNWALWAPEIEDRYQ 361

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+RY+L+      +D  +      +RVN++L    GNL +R +S+  +++   +P PG
Sbjct: 362 PDAIRYYLIANGPETRDSNWSWADFVQRVNSELVATWGNLANRVLSITHRNFG-AVPQPG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             T++D  +++   +  + +   +    +  AL++ ++L    ++Y   Q+PW+L + + 
Sbjct: 421 ELTDADRQLIAATQQTFESVTALLDGVKLRAALSEAMALAQTANQYLSEQEPWKLVRHDQ 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--------- 492
           +RA+TVL+V +  +  L +L   F+P  + ++ ++L           +++          
Sbjct: 481 ERAATVLFVALRTVDTLKVLFCPFLPFSSQRLHELLGYTGTIAPQPHVEETTAPDGLPRL 540

Query: 493 -----------------LKPGFMLHKTFDPIFPRF 510
                            L PG  + +   P+F + 
Sbjct: 541 VLTGDYRASAGAWRISVLPPGQPI-QPPTPLFQKL 574


>gi|15929104|gb|AAH15011.1| MARS protein [Homo sapiens]
          Length = 899

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 259 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 318

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 319 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 378

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 379 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 438

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 439 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 497

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 498 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 556

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 557 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 616

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 617 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 675

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 676 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 735

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 736 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 795

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 796 -TVSPLFQKL 804


>gi|167618283|ref|ZP_02386914.1| methionyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 710

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 134/548 (24%), Positives = 230/548 (41%), Gaps = 51/548 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+ AR  R+ G ++ +    D HG  +   
Sbjct: 7   QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLR 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV+ K  +++  R  +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 67  AEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAE 126

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    + +  D  +             G   +     + P   +          
Sbjct: 127 REIEQAYDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGAT 186

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   +FFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 187 PVRKTSTHHFFRLSD--PRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 244

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 245 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKD 304

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 305 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWL 364

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + +  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 365 RYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQA----S 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
            ++  +L      + +I  + + +   RAL Q + L   V+ Y D  KPWEL K   N  
Sbjct: 421 ATNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAV 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQSLDQRLKPGF 497
                  V++E  R L++ L+  +P++A  +   L +     AD N+   S +Q ++   
Sbjct: 481 ALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSS-EQPIRAYQ 539

Query: 498 MLHKTFDP 505
            L    DP
Sbjct: 540 HLMTRVDP 547


>gi|325129190|gb|EGC52035.1| methionyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 685

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 226/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            +I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKTGGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLAAESDTIAEQYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            R   V    +     L   L   +PK+A      L +  E   + +  + L  G     
Sbjct: 478 ARLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL--GKHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|152995574|ref|YP_001340409.1| methionyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836498|gb|ABR70474.1| methionyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 678

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 134/544 (24%), Positives = 232/544 (42%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  D+  RF ++ G         D HG  I   
Sbjct: 3   QTQRKILVTSALPYANGSIHLGHMLEHIQTDIWVRFQKMRGHLCTAVCADDAHGTAIMIK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T++  ++   +      +   I YD++  T  + + +    ++K + D G I  
Sbjct: 63  AAQNGITSEELIEGVRQEHMADFNDFLIGYDNYYSTHSEENREFSNSIYKALRDNGKIAV 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM---------- 160
                 Y    E +  D            E   G + +  +A + P++ +          
Sbjct: 123 RSIVQAYDPEKEMFLADRFIKGTCPKCKAEDQYGDNCEVCSATYTPMEMINPRSVYSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E YFF+L  +QD L  +  S     L  +  N++  ++ SGLK+  +SR    +
Sbjct: 183 PIEKDSEHYFFKLPDFQDFLAKWTRSGT---LQDQVANKLSEWLDSGLKEWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +         +W  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMASFKNLCDRTEGLEFDDYWAKDSDAELYHFIGKDIIN 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A    P  V +HG++   GEK+SKS G  I     ++ +    LRY+ 
Sbjct: 300 FHALFWPAMLDCAGYRTPTAVNAHGYVTVDGEKMSKSRGTFIKARTYLKHLDPQYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             ++     D         +RVN+D+   + N+ SR+ S I K +DG + +  +  E  +
Sbjct: 360 AAKLNSRVDDIDLSLSDFLQRVNSDIVGKVVNIASRTASFINKKFDGQLASDVSEAEMIQ 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
           S +         I E+ + +   +A+ +++ L    + Y   Q PW L K      +   
Sbjct: 420 SFID----AGDLIAEHFEGREYGKAIREIMRLADVANEYIAVQAPWVLAKDEATLPQVQA 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V + +   LA  L+  +P L       L    +   + +  + L  G  ++K F P+
Sbjct: 476 VCTVALNLFSILATYLKPVMPNLVTDAEAFLG---KELTWDNRSELL-FGKTVNK-FKPL 530

Query: 507 FPRF 510
             R 
Sbjct: 531 MGRI 534


>gi|291409351|ref|XP_002720959.1| PREDICTED: methionyl-tRNA synthetase isoform 1 [Oryctolagus
           cuniculus]
          Length = 908

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 226/550 (41%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLSRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSA 171
            +         R   +  D  V             G   +     +  +E +    ++  
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 172 YQDKLLSYYESHPEFILPIERRNEVI------------------SFVKSGLKDLSLSRKT 213
               + S      +     ER  E +                  S+++ GLK   ++R  
Sbjct: 440 SSPVVKSSQHLFLDLPKLEERLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---D 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K +     
Sbjct: 677 DDRRLLAHVTLELQHYHQLLEKARIRDALRSILTISRHGNQYIQVNEPWKRIKGDEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V V   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGMAVNVAALLSVMLQPYMPTVSASIQAQLQLPPPACSVLPTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|195149636|ref|XP_002015762.1| GL10845 [Drosophila persimilis]
 gi|194109609|gb|EDW31652.1| GL10845 [Drosophila persimilis]
          Length = 1021

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 113/549 (20%), Positives = 217/549 (39%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRCAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVHSAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYADARGDQCDKCGKLVNATELIRPRCKVCNTA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    ++++ GLK   ++R    WG
Sbjct: 434 PILRSSDQLFIDLPKAEPRLREWVDKAENGWTHNAKVITRAWLREGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P     + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHSGFEKKVFYVWFDAPFGYVSMTKRYTKEYQKWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +     +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQATGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K+++ ++P   A TE 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSIVPEVVA-TEE 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K N +   R
Sbjct: 670 ELILLALVNRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNDEQKKR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
           A+T++ +   +   LA LL  ++P  A  +F  L         +       L  G  + K
Sbjct: 730 AATIIGLCANIACLLANLLFPYMPSTARTLFAQLNAKQTPLNAEKPLATLLLPAGHKIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 PA-PLFAKL 797


>gi|302844133|ref|XP_002953607.1| hypothetical protein VOLCADRAFT_82392 [Volvox carteri f.
           nagariensis]
 gi|300261016|gb|EFJ45231.1| hypothetical protein VOLCADRAFT_82392 [Volvox carteri f.
           nagariensis]
          Length = 816

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 114/545 (20%), Positives = 224/545 (41%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R  + I++A+ Y N  PH+G+    ++ AD  AR+ R  G + ++  GTDE+G    
Sbjct: 36  VPGRRNVLITSALPYVNNVPHLGNIIGCVLSADCYARYCRARGHNCIYMCGTDEYGTATE 95

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      ++    DI++D F RT  +      + ++K +   G +
Sbjct: 96  TKALEEGLTCQQICDKYHAIHAEIYRWFDIAFDRFGRTPTRAQTAIAQDIFKSLHANGQL 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
            +      YS     +  D  VY           +G          NP + +        
Sbjct: 156 VQQEMQQLYSEAAGKFLADRFVYGTCPKCGYDDARGDQCDGCGNLLNPTELINPRCKLTG 215

Query: 165 --YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L       +                     ++++ GLK   ++R  
Sbjct: 216 TTPVLRSTRHVFLDLPQLSPALQEYITTTSTQGGWSANCVQLTNAWMRDGLKLRCITRD- 274

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDIL 268
             WG  +P +     + YVW DA   Y++ T        +  K  P D   +  +GKD +
Sbjct: 275 LKWGTPVPLEGYEDKVFYVWFDAPIGYISITAGYTPDWEAWWKS-PKDVELVQFMGKDNV 333

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +PA  L    P    K +    ++ ++G K SKS G  +   +  +  + V+  
Sbjct: 334 PFHTVIFPATQLGTQQPWTMMKSISVTEYLNYEGGKFSKSRGTGVFGNQAKDTGIPVEVW 393

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L+       D  +    L  + N++L   +GN ++RS+  + K ++G+IP       
Sbjct: 394 RYYLLANRPEQADTDFKWSDLAAKNNSELLANLGNFINRSLMFVAKFFEGVIPGATEAGL 453

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           ++        + ++E    ++   +   L  V+S+ ++ +++    KPW   K + D+ +
Sbjct: 454 AEAE---ELGKTVEEYISALERIKLKEGLRLVMSISADGNKFLQDTKPWVAVKEDKDKCA 510

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG----FMLHK 501
           T++  ++ ++R LA ++  ++P L++KI   + +  E+    +L   L  G      L  
Sbjct: 511 TLVATSMGLVRLLAAVMAPYMPSLSSKILSQMALPLESSI--ALTDELVAGSYRPQTLVP 568

Query: 502 TFDPI 506
              PI
Sbjct: 569 AGHPI 573


>gi|108762836|ref|YP_631021.1| methionyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|123374596|sp|Q1D8K2|SYM_MYXXD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|108466716|gb|ABF91901.1| methionyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 703

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 131/543 (24%), Positives = 221/543 (40%), Gaps = 42/543 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+  +++A+ Y N   HIGHA E +  D+  RF R  G DV++    D HG  I   A  
Sbjct: 3   ERTLVTSALPYANGPLHIGHAVEYVQTDIYVRFLRSCGRDVVYFCADDTHGTPIELNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + F+ +     +     LD+ +D F  T    +     +++ ++ +KGDI +   
Sbjct: 63  QGLKPEEFIARFHEEHQRDFHDLDVRFDYFHSTNSPENRQYAELIYGRLKEKGDIERRNI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D  +  D  +                                       P   
Sbjct: 123 EQTYCENDRRFLPDRFIKGTCPNCKASDQYGDACEKCGKAYDPTDLIDARCALCGTPPVR 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E  FF+LS ++D L                  ++  F + GL D  +SR    +G  
Sbjct: 183 KHSEHLFFKLSRHEDFLQDVLRKPGFIH--PGLATQLQGFFEKGLSDWDISRDGPYFGFA 240

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRFH 271
           IP +     YVW+DA   Y+ TT       G       +W AD     +H IGKDI+ FH
Sbjct: 241 IPGETDKYFYVWLDAPIGYIATTEKWAKETGKAKSALDYWSADADTRIIHFIGKDIVYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  A   +P ++  HG ++  GEK+SK+ G ++   + ++++    LRYF   
Sbjct: 301 ALFWPAVLNVAGFHIPSEIKVHGHLMLNGEKMSKTRGTMVPVRDYLDQLDPSYLRYFYAA 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    +D   +    ++RVN +L N +GNL +R++S++    +     PG        +
Sbjct: 361 NLGPGVEDLDLNLKDFRQRVNGELVNNVGNLANRALSLLAGPLE-KRLAPGRAEGPGREL 419

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +      + E+R+         A+  +  + S  + +     PW   K + + A   L  
Sbjct: 420 VEAALARVPEVRDAFDKLEYRSAIRVITEIASAANGFLQTAAPWAQVKKDAEVARADLSD 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT---FDPIF 507
             +V   L  LL    P+L+ K+F  L    E   FQ+L+    P     +     +P+ 
Sbjct: 480 AADVAYLLGALLAPVTPRLSEKLFAQLG--AEPLTFQALEGAKYPLLDRSRPIGTPEPLL 537

Query: 508 PRF 510
           PR 
Sbjct: 538 PRL 540


>gi|291409353|ref|XP_002720960.1| PREDICTED: methionyl-tRNA synthetase isoform 2 [Oryctolagus
           cuniculus]
          Length = 900

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 226/550 (41%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLSRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSA 171
            +         R   +  D  V             G   +     +  +E +    ++  
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 172 YQDKLLSYYESHPEFILPIERRNEVI------------------SFVKSGLKDLSLSRKT 213
               + S      +     ER  E +                  S+++ GLK   ++R  
Sbjct: 440 SSPVVKSSQHLFLDLPKLEERLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---D 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K +     
Sbjct: 677 DDRRLLAHVTLELQHYHQLLEKARIRDALRSILTISRHGNQYIQVNEPWKRIKGDEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V V   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGMAVNVAALLSVMLQPYMPTVSASIQAQLQLPPPACSVLPTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|226939673|ref|YP_002794746.1| methionyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226714599|gb|ACO73737.1| Sym [Laribacter hongkongensis HLHK9]
          Length = 684

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 146/549 (26%), Positives = 227/549 (41%), Gaps = 49/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + ++ +++A+ Y N   H+GH  E I  DV  RF ++ G +  +    D HG  I  AA
Sbjct: 2   SKRQILVTSALPYANGAIHLGHMVEHIQTDVWVRFQKMRGHECHYVCADDTHGSPIMLAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  + +             I YD++  T    +      ++K +     I   
Sbjct: 62  EKQGITPEALIARVRDEHLADFTGFHIGYDNYYSTNSPENKAFAEQIYKTLRASDKIVSR 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE--------- 162
                +    + +  D  V             G + +   A ++P +             
Sbjct: 122 TIEQLFDPEKQMFLPDRFVKGECPKCGARDQYGDNCEVCGATYSPTELKNPYSAVSGATP 181

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEF-------ILPIERRNEVISFVKSGLKDLSLS 210
                E YFFRL    D L  +     E         L  E  N++  +++ GL+D  +S
Sbjct: 182 VLKTSEHYFFRLGECADFLKDWTAGSSERADGAVQPHLQPESLNKMNEWIEGGLQDWDIS 241

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIG 264
           R    +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IG
Sbjct: 242 RDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFQNLCDRIGIDFNEWFKADSKAEMYHFIG 301

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVD 323
           KDIL FHA++WPA L  A    P  VF+HGF+   G+K+SKS G  I     +   +  +
Sbjct: 302 KDILYFHALFWPAMLKYAGYRTPTGVFAHGFLTVDGQKMSKSRGTFITARSYLDCGLNPE 361

Query: 324 ALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  +  A  +D     D    RVN+DL     N+ SR+   + K +DG +    A
Sbjct: 362 WMRYYIAAKLNARIEDIDLSLDDFVARVNSDLVGKFVNIASRAAGFVTKRFDGRL----A 417

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-- 440
              SD   L         I    + +   +AL  V++L   V+ Y DA KPWEL +    
Sbjct: 418 DGVSDVEPLGRLLAEAGSIAAAYEAREYAKALRDVMALADLVNAYVDANKPWELARQEGM 477

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ---SLDQRLKPGF 497
             R   V  V +   R LAI L+  +PKLA  +   L VA           L   +KP  
Sbjct: 478 DARLHEVCTVLINAFRLLAIYLKPVLPKLAEGVEAFLDVAPLTWADAGTVLLGHTIKPYQ 537

Query: 498 MLHKTFDPI 506
            L +  DP+
Sbjct: 538 HLMQRIDPV 546


>gi|309379858|emb|CBX21634.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 684

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKAGGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +             +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             SD ++L+  +   + I E  +N+   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ERLHEVCSELINAFTILTAYLAPVLPQTAANAARFLNLD----AITWANTRVTLGEHTIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|308388254|gb|ADO30574.1| methionyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 685

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 225/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            +I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAHDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  E   + +  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|33861424|ref|NP_892985.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33634001|emb|CAE19326.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 511

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 175/504 (34%), Positives = 278/504 (55%), Gaps = 12/504 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I+T + Y N +PH+G  Y  +I D +AR+ RL G DV+F TG DEHG KI + A+N G
Sbjct: 3   FVITTPLYYVNDKPHLGSIYTTLICDSIARYKRLTGADVIFITGVDEHGLKIQRTAKNKG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  +   D+ S  F+      DI+++ F+RT+ ++H    +  + ++    DIY G   G
Sbjct: 63  VEPQFHCDEISDIFKQNWKNWDITHNKFVRTSSQKHEYIVKEFYNRVKKSDDIYMGVQKG 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           WY +  E + ++      +           ++W  EE  FF+LS YQ   +      P F
Sbjct: 123 WYCVGCEEFKDN---PDNSPTHKCPIHQKTLEWKNEENLFFKLSKYQS-QIEELIKEPAF 178

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           I P ERRNE+I+FV  GLKD S+SR    WGI +PD   +  YVW DAL  Y++      
Sbjct: 179 IQPKERRNEIINFVSKGLKDFSISRTNVSWGISVPDIDNHTFYVWFDALLGYVSAISLDM 238

Query: 247 NPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                       WPAD+H+IGKDILRFHA+YWPA L+SA + +PKKV+ HGF+  +G+K+
Sbjct: 239 KEPSLDESIDNGWPADIHLIGKDILRFHAVYWPAMLISAGMKVPKKVYGHGFLTREGQKM 298

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            KSLGNV+DP  ++ + G +A+R++L+++I  G+DG +        +N DLAN IGNL++
Sbjct: 299 GKSLGNVLDPDILLSKYGKEAVRWYLLKDITLGQDGDFQNKRFVDIINNDLANTIGNLLN 358

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+ SM  K +D  +P+    ++ D S+     + ++    +  +  +  A   ++SL   
Sbjct: 359 RTSSMSRKWFDNRVPSNEMLSK-DNSLELYAKKTVENYFRHFNSYELDLAANVILSLAIN 417

Query: 424 VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y + ++PW L K   +    S ++Y  +E  R + +LL   +P L++KI   L +  
Sbjct: 418 TNLYLNEKQPWTLIKDEKNIPLVSNIIYNVLESTRIVGLLLLPILPNLSSKIDQQLGLLY 477

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDP 505
             +   S  ++L  G ++H++  P
Sbjct: 478 NEKG--SWKKQLDWGKLIHESILP 499


>gi|153839838|ref|ZP_01992505.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746645|gb|EDM57633.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 499

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 125/496 (25%), Positives = 211/496 (42%), Gaps = 42/496 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     
Sbjct: 71  MGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHS 307

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  +    P  VF HG++   G K+SKS G  +     ++ +  + LRY+   +
Sbjct: 308 LFWPAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +   D   + +   +RVNAD+ N I NL SR+   I K ++G +    A  E     +
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +   R    I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  
Sbjct: 428 AAADR----IAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICS 483

Query: 450 VTVEVIRQLAILLQAF 465
           V + + R L   L+  
Sbjct: 484 VGINLFRVLMTYLKPV 499


>gi|31544361|ref|NP_852939.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541205|gb|AAP56507.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930403|gb|ADC30342.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 590

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 170/532 (31%), Positives = 279/532 (52%), Gaps = 23/532 (4%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M + +K YIST I Y +  PHIGHAY  I+ D LARF +  G DV F +GTDE G+KI  
Sbjct: 11  MLKNKKCYISTPIYYASGNPHIGHAYTTILGDFLARFKKQRGYDVFFLSGTDEFGKKIET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++  +T +  VDQ S  F+++ D+L+I    F+RTTE +H +  + ++     K  IY
Sbjct: 71  KAKSLNLTPQKMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIY 130

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------------YKGADGQYYNAQHNPVQWMEEEGYF 166
              + G Y +  E  Y    V                  D Q Y    + +  + E  YF
Sbjct: 131 LDQWQGLYCVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVGHKISSINEPSYF 190

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQ 225
            +LS + D +      +   + P  R  E+++     GLKDLS+SR +  WGI+ P +  
Sbjct: 191 IKLSEFSDFIKESLTDNVPSVFPTSRNKEMLNNFVNVGLKDLSISRTSISWGIETPLNKS 250

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLS 281
           + +YVW+DAL +YLT+ G+    D    +FW  D    +H+I K+I RFH IYW  FL  
Sbjct: 251 HRIYVWLDALFSYLTSMGFGSEDDKLYQEFWNNDSSERIHLIAKEITRFHRIYWVIFLKM 310

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +  P ++ SHG+IL + G K+SKSL N+IDPIE+ E  GVD LRY+L++E++  +DG 
Sbjct: 311 LGIKQPTRMISHGWILDENGNKMSKSLNNIIDPIELAELFGVDQLRYYLLKELSLSEDGK 370

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             K  +++ +N+DL N +GNLV R + M+    +  I    A  E ++  L+   ++  E
Sbjct: 371 VGKRLIQETINSDLINNLGNLVHRLIPMLESRQESTILPYLAGNEVEDKYLADLQKLPAE 430

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLA 459
             + ++   I  A+  V+++  E     + +KPWEL K N     + +L+     IR + 
Sbjct: 431 FEKLVEENDIRSAIKLVLNISKEYSSVIEVRKPWELYKNNKTQELANILFAGACAIRTVF 490

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFDPIFPRF 510
           +LL+  +   + ++++ +    E    ++++   +     ++K+   +F + 
Sbjct: 491 VLLEPILTTKSKEVYEQMNFTPEQTQLKNINNFEQLFNHKINKSKK-LFQKL 541


>gi|156364627|ref|XP_001626448.1| predicted protein [Nematostella vectensis]
 gi|156213324|gb|EDO34348.1| predicted protein [Nematostella vectensis]
          Length = 646

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 115/545 (21%), Positives = 226/545 (41%), Gaps = 40/545 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  + + I++A+ Y N  PH+G+    ++  DV AR+ R+ G + L+ +GTDE+G     
Sbjct: 4   EGEKNILITSALPYVNNVPHLGNIIGCVLSGDVFARYCRIRGFNTLYISGTDEYGTATET 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +   D+  +    + D  +I +D F RTT +      + ++ K+  +  + 
Sbjct: 64  KALEEGLTPQQVCDKYHKLHCSVYDWFNIQFDFFGRTTTENQTKIAQDIFWKLHQQNHLV 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +           + +  D  V            +G          N  +    +      
Sbjct: 124 EDTVEQLQCTGCQRFLADRFVEGICPFCNYEDARGDQCDACGKLINATELKSPKCKVCGG 183

Query: 170 SAYQDKLLS----------YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +  +                             R    S+++ GLK   ++R    WG  
Sbjct: 184 TPEKKTSRHLFLNLTESSQDISCTSPGNWSPNARQITRSWIQEGLKPRCITRD-LKWGTP 242

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIY 274
           +P +     + YVW DA   YL+ T    +      K  P  +     + KD + FH + 
Sbjct: 243 VPLEGYTDKVFYVWFDAPIGYLSITANYTDQWEKWWKN-PKQVTLYQFMAKDNVPFHTVV 301

Query: 275 WPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P+ L+ A  N  L   + +  ++ ++ +K SKS G  +         +  D  R++L+ 
Sbjct: 302 FPSTLIGANDNYTLLNNISATEYLNYEDDKFSKSRGVGVFGDNAADSGIPADIWRFYLLY 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               G+D  +       + N++L N +GN ++R++  +  ++ G IP      + D + +
Sbjct: 362 MRPEGQDSAFSWSDFAIKNNSELLNNLGNFINRALMFLQNNFAGKIPDL-ELMDEDTNFI 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVL 448
           ++ +R L+   ENM    +   L  V+++    ++Y  A KPW L K +     RA TV+
Sbjct: 421 ALVNRELKVYYENMDKLRLREGLKVVLNISKYGNQYVQANKPWVLVKGSDAERCRAGTVI 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLKPGFMLHKTFDP 505
            +   +   L++L+  ++P ++ +I   L V  +  C    +     LKPG ++  T  P
Sbjct: 481 GLACNLSFMLSLLIHPYMPTVSKEIQTQLKVRAQEDCGILTEHFVPFLKPGHVIG-TPKP 539

Query: 506 IFPRF 510
           +F + 
Sbjct: 540 LFQKI 544


>gi|167585788|ref|ZP_02378176.1| methionyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 724

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 129/519 (24%), Positives = 219/519 (42%), Gaps = 45/519 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  QGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T    +      ++  + + G I +
Sbjct: 74  AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEQIYVALKENGLIAE 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  ++       +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PVRKTSKHYFFRLSD--PRCEAFLRDWVSGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L +  G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRRGIDFDAWIRKGSTAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   +LK +DG +      +
Sbjct: 372 RYYFAAKLNATMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     +  I  + + +   RAL   + L  EV+ Y D  KPWEL K   N  
Sbjct: 428 AMNHPLVAKLRDAIPGIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELAKDPANAV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V++E  R L++ L+  +P++A  +     +A 
Sbjct: 488 ALHETCSVSLEAFRLLSLALKPVMPRVAVAVEAFFGIAP 526


>gi|326572648|gb|EGE22637.1| methionyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 683

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 220/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR    +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDAPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L KT   D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKTGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLAPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFIP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|73968525|ref|XP_859038.1| PREDICTED: similar to methionine-tRNA synthetase isoform 5 [Canis
           familiaris]
          Length = 907

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVNLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDRRLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L V     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQVPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|310822488|ref|YP_003954846.1| methionyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395560|gb|ADO73019.1| Methionyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 708

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 132/541 (24%), Positives = 231/541 (42%), Gaps = 39/541 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK+ +++A+ Y N   HIGH  E +  D+  RF R  G +V++    D HG  I   A  
Sbjct: 3   EKILVTSALPYANGPIHIGHVVEYVQTDIYVRFLRSCGKNVVYFCADDTHGTPIELNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + FV +     R      DIS D F  T    +     +++ ++ +KGDI +   
Sbjct: 63  QGLKPEEFVARCYELHRKDFADFDISVDYFHSTHSPENRAYSELIYGRLKEKGDIERRDI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  +D+ +  D  +             G   +     ++P   ++           +
Sbjct: 123 EQTYCEKDKRFLPDRFIKGTCPNCKAKDQYGDSCEKCGKAYSPTDLIDPHCSLCGTPPVR 182

Query: 174 D---KLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGIKIP 221
                L      H  F+  + RR   ++         F + GL D  +SR    +G  IP
Sbjct: 183 KRSTHLFFKLSRHEAFLRELLRRPGFLNQGLATQLQGFFEKGLADWDISRDGPYFGFAIP 242

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRFHAI 273
            +     YVW+DA   Y+ TT       G       +W  D     +H IGKDI+ FHA+
Sbjct: 243 GETDKYFYVWLDAPIGYIATTEKWAQETGKAKSALDYWGPDSNTRIVHFIGKDIVYFHAL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L  A+L  P +V +HG +   GEK+SK+ G +I   + ++++    LR+F    +
Sbjct: 303 FWPAVLKVADLHGPDEVKAHGHLTVNGEKMSKTRGTLIPARDYLDKLDPSYLRFFYAACL 362

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D        + RVN +L N +GNL +R+++M+    +  +      T + ++++ 
Sbjct: 363 GSGPEDFDLSLKDFRLRVNGELVNNVGNLANRALTMLAGPLEKRLAPGS--TGAGKALVE 420

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
                + E+RE  +      A+  ++ +    + +  AQ PW   KT+ + A   L    
Sbjct: 421 AALARVPEVREAFEKLEYRNAIKAIVEISQTANAFLQAQAPWAKVKTDAEGARADLSDAA 480

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT---FDPIFPR 509
           +V+  L  LL   +P++ +K+F  L        F +L+    P     +     +P+ PR
Sbjct: 481 DVVYLLGALLAPVIPRVTDKLFAQLGAPP--LTFAALETARYPLLDRSRPIGTPEPLLPR 538

Query: 510 F 510
            
Sbjct: 539 L 539


>gi|193212895|ref|YP_001998848.1| methionyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086372|gb|ACF11648.1| methionyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 703

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 133/563 (23%), Positives = 236/563 (41%), Gaps = 64/563 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G DV+   G+DEHG  I   A 
Sbjct: 6   QRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLCGHDVIHIGGSDEHGVPITITAD 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  VD+  +   D      IS+D + RT+   HH+T R  + +I  KG   K  
Sbjct: 66  KEGISPQDVVDRYHKMNADAFARCGISFDYYGRTSGPVHHETAREFFSEIEKKGIFVKKT 125

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
              ++  +   + +D  +             G   +      +P + ++ +         
Sbjct: 126 EKQFFDPKAGRFLSDRYITGTCPVCKTPGANGDQCEQCGTHLSPTELIDPKSKLSDATPE 185

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 ++F L  YQ +L ++ E H          N   +++  GL D +++R  F WGI
Sbjct: 186 LRETLHWYFPLGRYQKQLEAFVERHTGDWR-SNVVNYSRTWLNQGLADRAITRDLF-WGI 243

Query: 219 KIPDD----PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +P D       ++YVW DA+  Y++ T        D    + +  D     ++ IGKD 
Sbjct: 244 SLPLDSEEAKGKVLYVWFDAVLGYISFTKEWAEKQGDSELWRRYWQDPETRIINFIGKDN 303

Query: 268 LRFHAIYWPAFLL-------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + FH + +PA L+            L   V +  F+  +G K SKS    +   E +E  
Sbjct: 304 VVFHTLMFPAILMAWNEGRSEGRYELADNVPASEFMNFEGRKFSKSRNYAVYLGEFLERF 363

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY +       KD  +     + R N +LA+ +GN + RS+      + G +P  
Sbjct: 364 PADTLRYSIAMNYPENKDTDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSRFGGEVPAD 423

Query: 381 GAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                 D    + + S       ++    +      A AQ + +    +RY    +PW++
Sbjct: 424 IDLEAWDGLGIDWLAS-----FGKLEAAYEGFHFREATAQAMEIARFANRYLTESEPWKV 478

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---------Q 487
            K +P+ A   + V++ +   LA+L    VP+ AN+I+ +L                  +
Sbjct: 479 IKVDPEAAGRTMAVSLNLCHTLALLFWPIVPETANRIWKMLGFEGRIDDLVEPGNPVWRK 538

Query: 488 SLDQRLKPGFMLHKTFDPIFPRF 510
           +L+  LK G  L  + + +F + 
Sbjct: 539 ALEPGLKKGHKLLGSSEILFSKI 561


>gi|73968519|ref|XP_531646.2| PREDICTED: similar to methionine-tRNA synthetase isoform 1 [Canis
           familiaris]
          Length = 898

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVNLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDRRLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L V     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQVPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|295675816|ref|YP_003604340.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435659|gb|ADG14829.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 711

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 132/519 (25%), Positives = 215/519 (41%), Gaps = 45/519 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   IS+D++  T    +      ++  + + G I  
Sbjct: 74  AEKEGLTPKQLIDRVWLEHKRDFDSFGISFDNYYSTDSDENRVLSENVYLALKEAGLIDA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 REIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  S+       +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PIRKTSTHYFFRLSD--PRCESFLREWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRQGSAAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L      L +I  + + +   RAL Q + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMHHPLLGTLRAALPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAKDPANAV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V++E  R L++ L+  +PKLA  +   L +  
Sbjct: 488 ALHETCSVSIEAFRLLSLALKPVLPKLAEAVEAFLGIEP 526


>gi|325190049|emb|CCA24532.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 589

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 191/522 (36%), Positives = 293/522 (56%), Gaps = 40/522 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG----LDVLFTTGTDEHGQKI 58
              ++ I+T I Y N+ PHIGH +  ++AD LAR++ +      +D L TTGTDEHG K+
Sbjct: 36  SNRRMMITTPIYYVNSSPHIGHLHSSVLADALARWYNMKKGPNSIDALLTTGTDEHGLKV 95

Query: 59  AKAAQN-AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
            +AA+         F D  S  FR++    ++ Y +F+RT++ +HH + R  W ++   G
Sbjct: 96  QQAAEKANAADYASFCDAISNQFRELFLHANMDYTEFVRTSDSKHHRSVRAFWNQLYGNG 155

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNP-------VQWMEEEG 164
            IY G +  WY   DE++  + +V        G DG+  N  +         V+ ++E  
Sbjct: 156 YIYLGQHEAWYCQSDESFLTEMQVEDSIRSTAGPDGEIINETYKISKESGHTVEKLKEVN 215

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----KSGLKDLSLSR--KTFDWG 217
           Y FRLSA+Q  LL + ES P+ I+P  R NEV  +      K+GL+D+S+SR  +   W 
Sbjct: 216 YKFRLSAFQQPLLEWLESSPDVIVPKTRYNEVNHYTVRATIKAGLRDISVSRLHEKIKWA 275

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I +PDD Q+ +YVW+DALTNYLT  GY D       + WP D H++GKDIL+FHAIYWPA
Sbjct: 276 ITVPDDSQHCIYVWLDALTNYLTCAGYPDAEKLD--RVWPPDYHIVGKDILKFHAIYWPA 333

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           FL++A LPLPK++ +H     K  K+SKSLGNV++P E+I++ G DA+RY+L+RE   G 
Sbjct: 334 FLMAAGLPLPKRIVAHAHWTVKDIKMSKSLGNVVNPFEIIKKYGTDAVRYYLLREGVLGS 393

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           DG +    L+ R++++LA+ +GNLVSRS +        +   P   T  D  ++     +
Sbjct: 394 DGDFKLSLLENRLSSELADTLGNLVSRSTARSFLVDGSVPRRPITLTPDDLELMKEGDAI 453

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-------------KTNPDRA 444
             ++  + Q    H+ L ++I  + +++RYF + +PW LK             +   +R 
Sbjct: 454 AAKVAVDFQIPDFHQGLQRIILYLHKLNRYFSSNEPWVLKTALDSQTLRPAEAEQATERL 513

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +L +T++  R   ILLQ  +P+ A +I D L V    R F
Sbjct: 514 QGILNITIDATRLCTILLQPAIPEAAERILDYLGVPRNERAF 555


>gi|254672536|emb|CBA06112.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 717

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 227/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 35  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 95  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 274

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 275 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 334

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 335 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 394

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 395 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGCLKDV--- 451

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 452 --ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 509

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +PK+A      L +  E   + +  + L  G     
Sbjct: 510 ERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL--GKHAIN 565

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 566 KYEHLMQR 573


>gi|73968523|ref|XP_849532.1| PREDICTED: similar to methionine-tRNA synthetase isoform 3 [Canis
           familiaris]
          Length = 905

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVNLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDRRLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L V     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQVPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|323525136|ref|YP_004227289.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323382138|gb|ADX54229.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 718

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 130/519 (25%), Positives = 218/519 (42%), Gaps = 45/519 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GVT K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I  
Sbjct: 74  AEKEGVTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 RDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++  +    +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PVRKTSTHYFFRLSD--PRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFRNLAQKRGLDFDAWVRKGSTAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K ++G +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFEGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L+     +  I  N + +  +RAL   + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMQHPLLATLRAAIPHIAGNYEAREYNRALRHTMELADAVNAYVDTAKPWDQAKDPANAV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V++E  R L++ L+  +PKLA  +   L +  
Sbjct: 488 ALHETCSVSIEAFRLLSVALKPVLPKLAESVEAFLGIEP 526


>gi|325133228|gb|EGC55897.1| methionyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139263|gb|EGC61807.1| methionyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 684

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 125/548 (22%), Positives = 222/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTDFGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++  +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFESRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ARLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRVTLGEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|325143425|gb|EGC65754.1| methionyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197336|gb|ADY92792.1| methionyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 684

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTDFGIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ARLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRVTLGEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|300176882|emb|CBK25451.2| unnamed protein product [Blastocystis hominis]
          Length = 647

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 115/550 (20%), Positives = 231/550 (42%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +   + + I++A+ Y N  PH+G+    ++ ADV AR+ R  GL+ L+  GTDE+G    
Sbjct: 85  VAGEQNILITSALPYVNNVPHLGNLIGCVLSADVFARYCRERGLNTLYVCGTDEYGTATE 144

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD---TCRILWKKISDK 116
             AQ   +T +   ++     R + D  DI +D F RT+ +         + ++K++ ++
Sbjct: 145 TRAQADHMTPREICNKFHAIHRAVYDWFDIHFDFFGRTSTEDPRKDTQIAQGIFKRLCEE 204

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFR 168
             + +      Y  +   +  D  +             G   +   N +   E      +
Sbjct: 205 DQLVEQEIEQVYCHQCGRFLADRFIEGTCPICGYPKAGGDQCDKCGNLLNATELVNPVCK 264

Query: 169 LSAYQDKLLSYYESHPEFILPI--------------------ERRNEVISFVKSGLKDLS 208
           +     K+ +    H    LP                        N    ++++GLK   
Sbjct: 265 VGGPTHKVENRVTKHLFLNLPKLEPELRAWVAATSVANDWSSNAINITNGWIENGLKPRC 324

Query: 209 LSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVI 263
           ++R    WG  +P +     + YVW DA   Y++ T           +  P D+     +
Sbjct: 325 ITRD-LKWGTPVPREGYEDKVFYVWFDAPIGYISITANYTKEWKQWWQN-PKDVKLVQFM 382

Query: 264 GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EV 320
           GKD + FH + +P+ L+    P  K  ++    ++ ++  K SKS G  +   +  +  V
Sbjct: 383 GKDNIPFHTVIFPSTLIGTRDPWTKVTQISCTEYLNYEDGKFSKSQGTGVFGDQAKDTNV 442

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             +  R++L+       D  +  + L ++ N +L   +GN V R +S +    D  +P  
Sbjct: 443 PSEVWRFYLLSNRPEQSDSAFYWEDLAEKNNNELLKNLGNFVHRCLSFVYNRMDATVPPC 502

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           GA TE ++ ++   +  LQ+  E M    +   L   + +    ++Y    +PW + K++
Sbjct: 503 GAKTEREQKLIEAVNETLQKYNEAMMGTHLKAGLKWAMEISRLGNQYLQDAEPWTVLKSD 562

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P++  T+ YV V ++  ++ + + F+P  ++K+   L   D  +     ++ +  G  ++
Sbjct: 563 PEQCGTICYVAVNLVYLISNVFEPFMPGFSDKVCYQLNF-DHGKIPDVFEEVIPAGHKIN 621

Query: 501 KTFDPIFPRF 510
           K   PIF + 
Sbjct: 622 KIL-PIFKKI 630


>gi|91782348|ref|YP_557554.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123063115|sp|Q143I7|SYM_BURXL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91686302|gb|ABE29502.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 710

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 132/517 (25%), Positives = 220/517 (42%), Gaps = 45/517 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I  
Sbjct: 74  AEKEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 RDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++  +    +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PVRKTSTHYFFRLSD--PRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSKAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VIE  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIETGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L+     + +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMQHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                  V++E  R L++ L+  +PKLA  +   L +
Sbjct: 488 ALHETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLAI 524


>gi|187649782|sp|A4VJ05|SYM_PSEU5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 679

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 223/545 (40%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               +++D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFADFLVNFDNFHSTHSPENRELAELIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------- 162
               + ++      +  D            E   G + +   A + P +  +        
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAISGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + +FF+L  ++  L  +        L     N++  ++  GL++  +SR    
Sbjct: 181 TPVLKDSKHFFFKLPDFEAMLKEWTRGGA---LQESVANKIAEWLDGGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW  +      H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + D   ++VN+DL   + N+ SR    I K  DG++       E  
Sbjct: 358 YASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
             + +        I +  + +   RA+ ++++L    + +   + PW L K    +A   
Sbjct: 416 --LWAAFQAAAPSIADAYEARDFARAMREIMALADRANAWIADKAPWALNKVEGKQAEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + V + RQL I L+  +P LA      L VA  +    +    L     L+  F P
Sbjct: 474 EICALGVNLFRQLVIFLKPVLPNLAAAAEQFLNVAPLSWDDHA---TLLANHKLNA-FTP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|91793410|ref|YP_563061.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123356753|sp|Q12MI8|SYM_SHEDO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91715412|gb|ABE55338.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 689

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 127/540 (23%), Positives = 229/540 (42%), Gaps = 45/540 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  D+ +RF ++ G +  +    D HG  I   
Sbjct: 3   QSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKMRGHECHYICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+  +  + Q            ++++D+F  T  + + +    ++ K+ D G I  
Sbjct: 63  AQQLGIAPEAMIAQVQIEHEQDFADFNVAFDNFHSTHSEENRELASDIYIKLRDAGHIKT 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ------------ 158
              S  Y      +  D  V             G +     A ++               
Sbjct: 123 KTISQLYDPEKSMFLPDRFVKGTCPKCKSDDQYGDNCDSCGATYSTTDLINPRSAVSGAT 182

Query: 159 --WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               + E +FF L A++  L  +  S     L  E  N++  + + GL+   +SR    +
Sbjct: 183 PVMKDTEHFFFDLPAFEGMLKEWIHSGS---LQSEMANKLNEWFEQGLQQWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +        G      FW  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMGSFKNFCAKRGDINFDDFWAKDSTAEVYHFIGKDIVY 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+++WPA L  A L  P  V++HG++   G K+SKS G  I     ++ +  + LRY+ 
Sbjct: 300 FHSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYY 359

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + +   +RVN+DL   + NL SR+   I K +DG +         D 
Sbjct: 360 AAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLANVT-----DN 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST-- 446
           S+        + I E  + +   +A+ +++++    + +   Q PW+L K +  +A    
Sbjct: 415 SLAESFIAKQEVIAEFYEAREYGKAMREIMAMADIANGFVAEQAPWQLVKDDDKQAQAHE 474

Query: 447 VLYVTVEVIRQLAILLQAFVPKLAN--KIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           V  + + + R L   L+  +P+L+   + F  L +  +N         + P   + +  D
Sbjct: 475 VCSIALNLFRILTTYLKPVLPRLSQDVEAFMQLELTWDNLAKDMTAHEIAPFKAMMQRVD 534


>gi|254805891|ref|YP_003084112.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669433|emb|CBA08678.1| Methionyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 717

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 127/532 (23%), Positives = 220/532 (41%), Gaps = 50/532 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 35  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 95  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 274

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 275 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 334

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 335 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 394

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 395 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 451

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 452 --ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 509

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +R   V    +     L   L   +P+ A      L +  E   + +  + L
Sbjct: 510 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRETL 559


>gi|14043022|ref|NP_004981.2| methionyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178332|sp|P56192|SYMC_HUMAN RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7804468|dbj|BAA95668.1| methionyl tRNA synthetase [Homo sapiens]
 gi|12803161|gb|AAH02384.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|13623455|gb|AAH06328.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|15079642|gb|AAH11639.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|15080151|gb|AAH11849.1| Methionyl-tRNA synthetase [Homo sapiens]
 gi|30583515|gb|AAP36002.1| methionine-tRNA synthetase [Homo sapiens]
 gi|60656267|gb|AAX32697.1| methionine-tRNA synthetase [synthetic construct]
 gi|307686053|dbj|BAJ20957.1| methionyl-tRNA synthetase [synthetic construct]
          Length = 900

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 440 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|166796169|gb|AAI59044.1| Unknown (protein for IMAGE:7540772) [Xenopus (Silurana) tropicalis]
          Length = 655

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 116/548 (21%), Positives = 231/548 (42%), Gaps = 41/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  + + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 8   VEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATE 67

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+ +     +    DIS+D F RTT +      + ++ ++  +  +
Sbjct: 68  TKAMEEGLTPQQICDKYNAVHTAIYQWFDISFDFFGRTTTQHQTTIAQDIFHRLLKRDFL 127

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSA 171
                        + +  D  V             G   +     +  +E +    ++  
Sbjct: 128 LTDTVEQLRCETCQRFLADRFVEGTCPFCNYEEARGDQCDKCGKLINAVELKKPQCKVCK 187

Query: 172 YQDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKT 213
                 S      +     +R  + +                   +++ GLK   ++R  
Sbjct: 188 KSPVKKSSKHLFLDLPKLEKRLEQWLEKSFSSGDWTSNARFITRSWIRDGLKPRCITRD- 246

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
             WG  +P D     + YVW DA   Y++ T    +      K        H + KD + 
Sbjct: 247 LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWWKSTQQVQLYHFMAKDNVP 306

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P+ LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 307 FHSVIFPSCLLGAEDNYTLVNHIIATEYLNYEDGKFSKSRGVGVFGDMAKDTGIPADIWR 366

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+     G+D  +    L  + N++L N +GN V+R+   + K ++G +P     +E 
Sbjct: 367 FYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQKFFNGCVPEMELLSE- 425

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D+ +L+  +  LQ+  ++++   I  AL  ++++    ++Y    +PW+  K N     R
Sbjct: 426 DKRLLAQVAAELQQYNQHLEKVRIRDALRCILNISRHGNQYIQVNEPWKCIKGNQQEQKR 485

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPGFMLHKT 502
           A TV  V V +   L+++L  ++P ++  I + L +  E++        RL+ G  +   
Sbjct: 486 AGTVTGVAVNMAALLSVMLHPYMPTVSGLIQEQLLMPQESKVLTTDFCCRLQSGHQIGN- 544

Query: 503 FDPIFPRF 510
             P+F + 
Sbjct: 545 VSPLFQKL 552


>gi|299531413|ref|ZP_07044821.1| methionyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720576|gb|EFI61525.1| methionyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 715

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 146/559 (26%), Positives = 237/559 (42%), Gaps = 61/559 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL+++TA+ Y N   HIGH  E I AD   R  R+ G  V F    D HG  I  AA+ 
Sbjct: 4   RKLFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVNFVGADDAHGAPIMIAAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D++  T    +H+  + ++  +   G I     
Sbjct: 64  AGKTPQQFVADIAAGRKQYLDGFHIAFDNWSNTDSAENHELSKQIYLDLKKAGFIETRTI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G + +  ++ + P   +             
Sbjct: 124 EQFFDPEKNMFLPDRFIKGECPRCHAKDQYGDNCEVCSSVYAPTDLINPFSALSGATPVM 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----------KSGLKDLSL 209
              E +FF+LS  +        +     +  E   ++  +             GL D  +
Sbjct: 184 KSSEHFFFKLSDPRAVEFLTEWTQNGKHVQPEVAAKIKEWFGVRTNPDGSTSEGLDDWDI 243

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIG 264
           SR    +GI+IPD P    YVW+DA   YL +   L N  G     + AD      H IG
Sbjct: 244 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKELLNRRGEDYDAYMADPDLEQYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGV 322
           KDI+ FH ++WPA L  +    P ++  HGF+  + GEK+SKS G  +DP++ +  ++  
Sbjct: 304 KDIITFHTLFWPAMLKFSGRKTPTRICVHGFMTVNNGEKMSKSRGTGLDPLKYLSLKMNP 363

Query: 323 DALRYFL-VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY+L  +     +D  ++ +    RVN+DL     N+ SR+   I K +DG     G
Sbjct: 364 EWLRYYLGAKLNGKNEDIDFNPEDFMLRVNSDLIGKYVNIASRAAGFISKRFDG---RLG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN- 440
             +E  +++L+        I    + +   RA  +++ L  +V+ Y DA KPWEL K   
Sbjct: 421 VVSEDGQTLLAALREQQAAIVAAYEGRDSARAAREIMLLCDKVNSYVDANKPWELAKKEG 480

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              R   V    +E  R L I L   +P +A ++   L V  EN  F  + + L  G  +
Sbjct: 481 MDARLHDVCTTCIEAFRILTIYLSPILPGVAAEVASFLIVPPEN--FADVVKPLGVGHQI 538

Query: 500 -----------HKTFDPIF 507
                       K  + +F
Sbjct: 539 GVYQHLMQRVDPKQLEALF 557


>gi|296162307|ref|ZP_06845101.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295887461|gb|EFG67285.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 710

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 132/517 (25%), Positives = 220/517 (42%), Gaps = 45/517 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+  +  +   D   IS+D++  T  + +      ++  + + G I  
Sbjct: 74  AEKEGLTPKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 RDIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++  +    +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PVRKTSTHYFFRLSD--PRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSKAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VIE  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIETGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L+     + +I  N + +  +RAL Q + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMQHPLLASLRAAVPQIAANYEAREYNRALRQTMELADAVNAYVDTAKPWDQAKDPANGV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                  V++E  R L++ L+  +PKLA  +   L +
Sbjct: 488 ALHETCSVSIEAFRLLSLALKPVLPKLAEAVEGFLAI 524


>gi|194757892|ref|XP_001961196.1| GF13746 [Drosophila ananassae]
 gi|190622494|gb|EDV38018.1| GF13746 [Drosophila ananassae]
          Length = 1020

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 117/551 (21%), Positives = 219/551 (39%), Gaps = 48/551 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      
Sbjct: 252 GQRNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENK 311

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T +   D+       +     I +D F RTT +   D  +  +K +   G I K
Sbjct: 312 ALAENLTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLSAGYIIK 371

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG---- 164
                    + + +  D  V              +G          N  + +        
Sbjct: 372 ESVEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCN 431

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                      F      +  L  +    E       +    +++K GLK   ++R    
Sbjct: 432 SAPVIRSSDQLFIDLPKAEPQLKDWVDKSEGGWTNNAKVITRAWLKEGLKPRCITRD-LK 490

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDI 267
           WGI +P     + + YVW DA   Y++ T           +  PA          + KD 
Sbjct: 491 WGIPVPHKGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAKGTDVELFQFMAKDN 548

Query: 268 LRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FH++ WP+ LL  +    L   + +  ++ ++  K SKS G  +   +  E  +  D 
Sbjct: 549 VPFHSVVWPSILLAVNKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADV 608

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L      G+D  +  + L  R N++L N +GN V+R++    K+++  +P   A T
Sbjct: 609 WRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVP-EVALT 667

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP 441
           + +  +L++ +R L+    +M+   +   +  ++++    + Y   Q+PW L K      
Sbjct: 668 QDELILLALINRELKGYINSMEKAKLRDGIRHLLAVSRHGNGYMQTQQPWVLLKGSDEQK 727

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFML 499
            RA+T++ ++  +   LA LL  ++P  A  +F  L         +       L  G  +
Sbjct: 728 KRAATIIGLSANIACLLANLLFPYMPTTARTLFSQLNAKQTPLNAEKPLATLLLPAGHKI 787

Query: 500 HKTFDPIFPRF 510
            K   P+F + 
Sbjct: 788 GKPA-PLFAKL 797


>gi|125807237|ref|XP_001360316.1| GA13491 [Drosophila pseudoobscura pseudoobscura]
 gi|54635488|gb|EAL24891.1| GA13491 [Drosophila pseudoobscura pseudoobscura]
          Length = 1021

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 112/549 (20%), Positives = 215/549 (39%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRCAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVHSAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYADARGDQCDKCGKLVNATELIRPRCKVCNTA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    ++++ GLK   ++R    WG
Sbjct: 434 PILRSSDQLFIDLPKAEPRLREWVDKAENGWTHNAKVITRAWLREGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P     + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHSGFEKKVFYVWFDAPFGYVSMTKRYTKEYQKWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +     +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQATGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K+++ ++P   A TE 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSIVPEVVA-TEE 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDR 443
           +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K       R
Sbjct: 670 ELILLALVNRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGSDEQKKR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
           A+T++ +   +   LA LL  ++P  A  +F  L         +       L  G  + K
Sbjct: 730 AATIIGLCANIACLLANLLFPYMPSTARTLFAQLNAKQTPLNAEKPLATLLLPAGHKIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 PA-PLFAKL 797


>gi|293364032|ref|ZP_06610768.1| methionine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552522|gb|EFF41296.1| methionine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 515

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 164/501 (32%), Positives = 274/501 (54%), Gaps = 11/501 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  YI+T I Y +   HIGH Y   +A  +A + +  G DV F TG+DEHGQKI   
Sbjct: 3   KNKKTFYITTPIYYASGNLHIGHLYTTTLAWTIANYKKSRGYDVKFLTGSDEHGQKIFLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ A ++ + +VD   +N++ M     I YD F RTT + H +T + +++    KG IY 
Sbjct: 63  AQEANISAQKYVDDLVKNYKKMWSDFGIDYDYFSRTTNQNHKETIQQIFELFLKKGIIYN 122

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
           G Y G YS+ DE ++   +  KG DG YY+   N  +  ++EE YFF++S +Q+ L    
Sbjct: 123 GNYEGLYSVSDEEFFTKTQAVKGQDGNYYHPLSNHKLSVVKEESYFFKMSEFQEWLKLEI 182

Query: 181 ESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++P ++ P +  NE   +F+  GL+DLS++R    WGIK   DP++ +YVW+DAL NY+
Sbjct: 183 LNNPTWLNPQKVINELNNNFISKGLEDLSVTRSNVSWGIKTLSDPKHTIYVWLDALCNYI 242

Query: 240 TTTGYL--DNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           +  G+    N +    K+W      +H++GK+I RFH IYWP FL + ++ +P K+ SHG
Sbjct: 243 SALGFNLKSNTNTDFEKYWQNGDEIVHLLGKEISRFHFIYWPIFLKALDIKMPSKMISHG 302

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +I+    K+SKS  NVIDP +++ +   + ++YF V +I  G+DG +D    +  +N++L
Sbjct: 303 WIITPTGKMSKSKNNVIDPYDLLAKYHPEMIKYFFVSKINLGEDGVFDIKLFEDTINSEL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +D  I    +     ++I +      ++  +      +   L
Sbjct: 363 INNYGNLVSRTLKMISNSFDNGIKHKKSDDNIHKNIDTAILESKEKFIKYFDEFNLSTGL 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              I L + +++Y D   PW+L     D    +L   +  I  ++  L+  +P+  N++ 
Sbjct: 423 KVAIDLGNTLNKYIDETTPWKLT-DRLDELELILSRLLNGIYAMSTYLKVVMPQKMNEVS 481

Query: 475 DILFVA---DENRCFQSLDQR 492
             L +    ++ + F+  D +
Sbjct: 482 KALNIEFDLEQVQNFEKFDNK 502


>gi|62897093|dbj|BAD96487.1| methionine-tRNA synthetase variant [Homo sapiens]
          Length = 900

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 440 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|116690457|ref|YP_836080.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|162218052|ref|YP_621702.2| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|187647708|sp|A0K9L0|SYM_BURCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649797|sp|Q1BUH6|SYM_BURCA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116648546|gb|ABK09187.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 718

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 132/547 (24%), Positives = 228/547 (41%), Gaps = 48/547 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  I   
Sbjct: 15  QGSRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPIMLR 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   +S+D+F  T  + +      ++  + + G I +
Sbjct: 75  AEKEGLTPKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAE 134

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 135 REIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGAT 194

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                 + YFFRLS    +  S+       +   E  N++  +     +S L D  +SR 
Sbjct: 195 PVRKTSKHYFFRLSD--PRCESFLREWVSGLAQPEATNKMREWLGDAGESKLADWDISRD 252

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L   +G     W          H IGKD
Sbjct: 253 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERNGIDFDAWIRPGSKAEQYHFIGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + L
Sbjct: 313 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWL 372

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  A  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 373 RYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQD----S 428

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
             +  +++     + +I  + + +   RAL   + L  EV+ Y D  KPW+L K   N  
Sbjct: 429 AMNHPLVAKLRDAIPQIAASYEAREYGRALRHTMELADEVNAYVDGAKPWDLAKDPANAV 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                  V++E  R L++ L+  +P++A  +     +A     +    + L     + K 
Sbjct: 489 ALHETCSVSLEAFRLLSLALKPVMPRVAVAVEAFFGIAP--LAWADAAKPLSSAQPI-KA 545

Query: 503 FDPIFPR 509
           +  +  R
Sbjct: 546 YQHLMTR 552


>gi|326796149|ref|YP_004313969.1| Methionyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546913|gb|ADZ92133.1| Methionyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 683

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 129/544 (23%), Positives = 227/544 (41%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  D+  RF +L G         D HG  I   
Sbjct: 3   QTQRKILVTSALPYANGPIHLGHMLEHIQTDIWVRFQKLRGHVCNAVCADDAHGTAIMIR 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T +  +D          +   I YD++  T    + +    +++ + D G I  
Sbjct: 63  AEQNGITPEELIDGVRAEHMKDFNDFLIGYDNYHSTHSSENQELSSSIYQALRDNGKISV 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEE------- 163
              +  Y      +  D            E   G + +  +A + P++ +          
Sbjct: 123 RSITQAYDPEKGMFLADRFVKGTCPKCKAEDQYGDNCEVCSATYTPMEMINPRSVYSGAT 182

Query: 164 -------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                   YFF+L  +Q+ L  +  S     L  +  N++  ++ SGL++  +SR    +
Sbjct: 183 PIEKSSDHYFFKLPEFQEFLQKWTRSGT---LQTQVANKLSEWLDSGLQEWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +  +L +     +   +W  D      H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMASFKHLCDRTEGLNFDDYWAKDADSELYHFIGKDIVN 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A    P  V  HG++   G K+SKS G  I     +  +    LRY+ 
Sbjct: 300 FHALFWPAMLDCAGYRTPTGVNVHGYVTVNGTKMSKSRGTFIMARTYLNHLDPQYLRYYY 359

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +   +RVN+D+   + N+ SR+ S I K +D  + T  A  +  +
Sbjct: 360 AAKLNSSVDDIDLNLEDFVQRVNSDVVGKVVNIASRTASFINKKFDSQLATDVAENDMIQ 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
             +         I E  + +   +A+ + + L    + Y   Q PW L K+     +   
Sbjct: 420 DFI----NAGDTIAEFYETREYGKAIRETMRLADIANTYIADQAPWVLAKSEDTLPKVQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V++ +   LA  L+  +P L       L    +   + +  + L  G  ++K F P+
Sbjct: 476 VCSVSLNLFAILATYLKPVLPTLITDAEAFLG---KELTWDNRSELL-FGRTINK-FKPL 530

Query: 507 FPRF 510
             R 
Sbjct: 531 MARI 534


>gi|296113614|ref|YP_003627552.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921308|gb|ADG61659.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 683

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 122/545 (22%), Positives = 219/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR    +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDAPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L K    D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLAPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFIP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|218767290|ref|YP_002341802.1| methionyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|25009400|sp|Q9JWP0|SYM_NEIMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121051298|emb|CAM07582.1| methionyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 685

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 224/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D  +L+  +   + I E  +++   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSELLAKLTAQSEAIAECYESREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            R   V    +     L   L   +P+ A      L +  E   + +  + L  G     
Sbjct: 478 ARLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRETL--GKHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|326574245|gb|EGE24193.1| methionyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 683

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 220/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR T  +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDTPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L K    D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLAPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFIP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|296212123|ref|XP_002752733.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Callithrix
           jacchus]
          Length = 830

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 182 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 241

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 242 TKAMEEGLTPQEICDKYHIIHADIYRWFNISFDVFGRTTTPQQTKITQDIFQRLLARGFV 301

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N V+  + +    R
Sbjct: 302 LQDTVEQLRCERCARFLADRFVEGVCPFCGFEEARGDQCDKCGKLINAVELKKPQCKVCR 361

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                     S+++ GLK   ++R  
Sbjct: 362 SCPVVKSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAWFITRSWLRDGLKPRCITRD- 420

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 421 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 479

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH I +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 480 PFHGIVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 539

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 540 RFYLLYMRPEGQDSTFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 598

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  L+   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 599 DDQRLLAHVTLELRHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKQIKGSEADRQ 658

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 659 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 718

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 719 -TVSPLFQKL 727


>gi|119899492|ref|YP_934705.1| methionyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|187645705|sp|A1KAG3|SYM_AZOSB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119671905|emb|CAL95819.1| MetG protein [Azoarcus sp. BH72]
          Length = 723

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 130/546 (23%), Positives = 211/546 (38%), Gaps = 55/546 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I  D+  RF R+ G  V +    D HG  I   A+ 
Sbjct: 3   RKILVTNALPYANGDIHLGHLVGYIQGDIWVRFQRMRGNSVHYVCADDTHGTPIMLRAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +D+             + +D +  T    +      ++ K+   G I     
Sbjct: 63  EGITPEQLIDRVHGEHLRDFTDFGVGFDHYHSTHSAENRAYAEEIYGKLLGAGFIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y    E +  D  +             G + +   A + P +               
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAGDQYGDNCEVCGAAYAPTELKNPYSAVSGAKPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLS 210
              E YFFRLS      +         +  E  L  E  N++  +     ++ L D  +S
Sbjct: 183 RTSEHYFFRLSDPRAVEFLRDWTRGTNAGGERRLQAEAANKMKEWLGEAGENKLSDWDIS 242

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----------- 259
           R    +G +IP  P    YVW+DA   YL +  +     G  A     D           
Sbjct: 243 RDAPYFGFEIPGAPGKYFYVWLDAPIGYLASFRHYAERRGDIAVADYTDAARAESHGTEL 302

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H IGKDIL FHA++WPA L  A    P ++  +GF+   G K+SKS G  I     I +
Sbjct: 303 VHFIGKDILYFHALFWPAMLKFAGYRTPTQLCVNGFLTVDGAKMSKSRGTFITARSYIVQ 362

Query: 320 -VGVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+         +D   + D +  +VN+DL     N+ SR    I K +DG +
Sbjct: 363 GLNPEWLRYYFASKSNGTMEDVDLNLDDMIAKVNSDLVGKYVNIASRCAGFIAKRFDGKL 422

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                   +D    S       +I +    +   RAL +++ L    ++Y +  KPWEL 
Sbjct: 423 GASDPKATAD--FESAYES--AQIAQAYDERDYGRALREIMRLADLANQYVNDHKPWELA 478

Query: 438 KTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K +   A    V    + + R L + L+  +P LA K+   L +      +    + L  
Sbjct: 479 KQDGQDAQLHVVCSTALTLFRDLTLYLKPVLPGLAAKVEAFLALPP--LQWNDSWKPLPA 536

Query: 496 GFMLHK 501
           G  +  
Sbjct: 537 GHAITA 542


>gi|255070991|ref|XP_002507577.1| predicted protein [Micromonas sp. RCC299]
 gi|226522852|gb|ACO68835.1| predicted protein [Micromonas sp. RCC299]
          Length = 509

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 174/514 (33%), Positives = 275/514 (53%), Gaps = 28/514 (5%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T + Y N +PHIGH Y   +ADV AR  R  G DV F TGTDEHG K+ ++A+  G+ 
Sbjct: 1   VTTPVYYVNDKPHIGHVYTSTVADVYARLQRNMGKDVFFLTGTDEHGLKVEQSAEKRGIG 60

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
           T+   D+NS  FR++ D ++ISY  FIRTT+  H    + L + +  KG IY G + GWY
Sbjct: 61  TQQLADENSALFREVMDDMNISYTSFIRTTDTSHQVQVQRLVEILLQKGFIYLGKFEGWY 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
               E YY   E+     G         +    EE Y+F+LSA+Q++LL ++E +P F+ 
Sbjct: 121 DEGQEEYYTAKEI-----GYKSLISGKDLTRSSEENYYFKLSAFQEQLLRFHEDNPYFLT 175

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL--------- 239
           P  RRNE+I+ ++ GL D+ +SR  F WGI +P D  +++YVWIDAL NY+         
Sbjct: 176 PPARRNEIINRLQEGLNDIPVSRTNFTWGITMPGDDSHVIYVWIDALLNYITALNLAEGL 235

Query: 240 --TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                  + + +     FWPA LHV+ K+I  FHA+ WPA LL+  LPLP++V +HGF +
Sbjct: 236 GKDADESICHSEEGLKDFWPASLHVMAKEISWFHAVIWPALLLALELPLPERVHAHGFWI 295

Query: 298 HKGEKISKSLGNVID---PIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNAD 353
            +G+K+SKSLGN +D        +  G+D LRY+L+ E     +D  +    + +  + D
Sbjct: 296 REGKKMSKSLGNFVDLEVMKRFSDHYGLDGLRYYLLTEGPVGSQDANFSAGRVHEVYSTD 355

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC------SRVLQEIRENMQN 407
           LAN +GN +SR+ +MI K Y          +  +             +    ++  +++ 
Sbjct: 356 LANTLGNSLSRTTAMINKYYSEGGLPSEISSAGNRITWERFDWPTLTAEAAADVVRHVEA 415

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAF 465
             + +A    I LV+ VD +    +P+ + K     +    VLY  +E +R   +LL+ F
Sbjct: 416 LELPKATNAAIGLVARVDLFISETEPFRMAKDESKAEELGAVLYQCLEALRIACVLLEPF 475

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P+  +++   + + + N   +     LKPG  +
Sbjct: 476 LPQKIDEVGKHMDLGNGNFKERVRWGSLKPGSKV 509


>gi|122937774|gb|ABM68611.1| AAEL014709-PA [Aedes aegypti]
          Length = 1019

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 120/549 (21%), Positives = 216/549 (39%), Gaps = 44/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      
Sbjct: 254 GQKNNLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETK 313

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T K   D+       +     I +D F RTT        + ++K +   G I  
Sbjct: 314 ALAENLTPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIET 373

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                    + + Y  D  V              +G          N ++ +        
Sbjct: 374 RAVDQLLCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCN 433

Query: 169 LS-------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            S                +  L  +    E       R    +++K GLK   ++R    
Sbjct: 434 TSPIIRQSSQFFLDLPKIEPKLREWVDKAEHGWTHNARVITRAWLKEGLKSRCITRD-LK 492

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLH-VIGKDILR 269
           WGI +P +     + YVW DA   Y++ T           +       DL+  + KD + 
Sbjct: 493 WGIPVPLEGYEDKVFYVWFDAPIGYISMTSRYSKEWKQWWQPSAETKVDLYQFMAKDNVP 552

Query: 270 FHAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALR 326
           FH++ +PA    +     L   + +  ++ ++  K SKS G  +   +     +  D  R
Sbjct: 553 FHSVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWR 612

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N +L   +GN V+R++    K +D +IP P    E 
Sbjct: 613 FYLCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEE 671

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D ++L++ +R L+     M+   +   +  ++ +    ++   A++PW L K   D   R
Sbjct: 672 DFTLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTR 731

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHK 501
           A TV+ +   +   LA L+  F+P  A  ++  L V+      +    R  L  G  + K
Sbjct: 732 AGTVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVSSGQIESEKPQMRIFLPSGHKIGK 791

Query: 502 TFDPIFPRF 510
               +F + 
Sbjct: 792 PA-VLFNKI 799


>gi|109097438|ref|XP_001116063.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Macaca mulatta]
          Length = 900

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 221/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VTGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHIIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 LSAYQDKLLS----------YYESHPEFILPIERRN-----EVISFVKSGLKDLSLSRKT 213
                                 E      LP             S+++ GLK   ++R  
Sbjct: 440 SCPVVQSTHHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH I +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGIVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|148656167|ref|YP_001276372.1| methionyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|187647763|sp|A5UUW9|SYM_ROSS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148568277|gb|ABQ90422.1| methionyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 592

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 135/575 (23%), Positives = 251/575 (43%), Gaps = 72/575 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + ++ A  Y N   H+GH A   + ADV AR+ RL G  VL  +G+D HG  I  AA+
Sbjct: 3   DNILVAVAWPYANGPFHVGHIAGAYLPADVFARYQRLRGNRVLMVSGSDCHGTPITIAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  + +    F      L IS+D F +T    H+     ++ ++ + G +YK  
Sbjct: 63  REGITPQDVIRRYHPTFLKTFQTLGISFDLFTQTYTDNHYRVTTDIFLRLLENGYLYKET 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP--------------VQ 158
             G YS     +  D  V            +G         H+P              V 
Sbjct: 123 MVGSYSETLGRFLPDRFVEGTCPNCGYPRARGDQCDGCGHLHDPQDLIAPRSVLDGAPVT 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F  L+  + +L ++ +S               ++++ GL+  +++R   +WG+
Sbjct: 183 FRETEHFFLDLAKLEPQLRAWLDSVDRSYWRPNTLLFTQNWLREGLRGRAITRD-LEWGV 241

Query: 219 KIPDDP----QYIMYVWIDALTNYLT-----------TTGYLDNPDGSKAKFWPA-DLHV 262
            +P D        +YVW DA+  Y +              + +          PA   + 
Sbjct: 242 PVPVDDPTFKDKRIYVWFDAVIGYYSASIEWAQRSGAPDAWQEWWVCRPDGSSPARSYYF 301

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I WPA L+   +L LP  V ++ F+  +G+K+S S    +   E+ E   
Sbjct: 302 IGKDNIPFHTIIWPAILIGYGDLALPYDVPANEFLNLEGDKMSTSRNWALWAPEIEERYQ 361

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+RY+L+      +D  +      +RVN++L    GNL +R +S+  +++   +P PG
Sbjct: 362 SDAIRYYLIANGPETRDSNWSWADFVQRVNSELVATWGNLANRVISLTHRNFG-AVPQPG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           A  ++D  +++   +  +++   ++   +  AL + ++L    ++Y   Q+PW+L K++ 
Sbjct: 421 ALIDADRQLIAATQQAFEQVTTLLEGVKLRAALQEAMALAQTANQYLSDQEPWKLVKSDQ 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--------- 492
           +RA+TVL+V +  +  L  L   F+P  + ++ ++L  +        +++          
Sbjct: 481 ERAATVLFVALRTVDTLKTLFCPFLPFSSQRLHELLGYSGTIAPQPYVEETDAPDGAPRL 540

Query: 493 -----------------LKPGFMLHKTFDPIFPRF 510
                            L PG  +H    P+F + 
Sbjct: 541 ILTGDYTTEAGLWTPSVLAPGQPIHAPA-PLFQKL 574


>gi|327479892|gb|AEA83202.1| methionyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 679

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 223/545 (40%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 1   MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               +++D+F  T    + +   +++ ++ D G I 
Sbjct: 61  RAEKEGITPEQLIANVQAEHSADFADFLVNFDNFHSTHSPENRELAELIYTRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------- 162
               + ++      +  D            E   G + +   A + P +  +        
Sbjct: 121 TRSVTQYFDPEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAISGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + +FF+L  ++  L  +        L     N++  ++  GL++  +SR    
Sbjct: 181 TPVLKDSKHFFFKLPDFEAMLKEWTRGGA---LQESVANKIAEWLDGGLQEWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW  +      H IGKDI+
Sbjct: 238 FGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKDII 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 298 NFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYY 357

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + D   ++VN+DL   + N+ SR    I K  DG++       E  
Sbjct: 358 YASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE-- 415

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
             + +        I +  + +   RA+ ++++L    + +   + PW L K    +A   
Sbjct: 416 --LWAAFQAAAPSIADAYEARDFARAMREIMALADRANAWIADKAPWALNKVEGKQAEVQ 473

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + V + RQL I L+  +P LA      L VA  +    +    L     L+  F P
Sbjct: 474 EICALGVNLFRQLVIFLKPVLPNLATAAEQFLNVAPLSWDDHA---TLLANHKLNA-FTP 529

Query: 506 IFPRF 510
           +  R 
Sbjct: 530 LMTRI 534


>gi|89097430|ref|ZP_01170319.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
           NRRL B-14911]
 gi|89087726|gb|EAR66838.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
           NRRL B-14911]
          Length = 547

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 133/535 (24%), Positives = 234/535 (43%), Gaps = 39/535 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R+ G +VL+ +G+D +G  IA  A++ G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRMKGEEVLYVSGSDCNGTPIAIRAKHEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D+  R+F    + L  +YD + RT    HH T + ++  + + G +       
Sbjct: 63  KSAKEIADRYHRDFAASFEQLGFTYDLYTRTDAPHHHQTVQEVFLSLLENGHLVPRTIEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V                                      P +  E 
Sbjct: 123 TYCRTCVQFLPDRYVEGVCPSCGSQARGDQCDACSAILEPADLLDKSCKICGTPPEMKET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRK-TFDWGIKI 220
           + Y+FRLS +Q +L    E      L      +    ++  GL D + +R       + I
Sbjct: 183 DHYYFRLSHFQKQLEELSEEARSRHLWRDNSSSLTRRYLTEGLLDRAATRDLDVGVPVPI 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADL---HVIGKDILRFHAIYWP 276
               +  +YVWI+A+  YL+ +       G   ++FW +D+   +V GKD + FH I WP
Sbjct: 243 EGMEKKKIYVWIEAVIGYLSASREWARQHGKDGSRFWGSDVISYYVHGKDNIPFHTIIWP 302

Query: 277 AFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A  +   LP  P ++ S  ++  + +K+S S    +   +++E    D++RYFL      
Sbjct: 303 AIQMGIGLPGEPARMVSGEYLTLEKKKLSTSRNYAVWVPDILERYEPDSIRYFLAVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GNLV+R+   I K YD MIP         E I  +  
Sbjct: 363 NRDADFSWREFVYSHNSELLGAYGNLVNRTFKFIEKYYDSMIPDGKLSEAVQEDIKHLYE 422

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +  ++I    +   +  AL  + + V   ++YFD+++PW+  K++P + +  L   V +I
Sbjct: 423 KTGEKI----EGAKLKEALEDIFAFVRSANKYFDSEQPWKTIKSDPQKCADALQTCVYII 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + LA LL  F+P  + KI ++L V      ++ +    +       T  P+F R 
Sbjct: 479 KNLARLLNPFLPFSSRKINNMLQVNAHTLEWKEV----RAAEKRLGTIAPLFSRL 529


>gi|149066599|gb|EDM16472.1| rCG59785, isoform CRA_a [Rattus norvegicus]
          Length = 910

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 262 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 321

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT        + +++++  +G +
Sbjct: 322 TKAMEEGLTPQEICDKYHAIHVDIYRWFNISFDTFGRTTTPLQTKITQDIFQRLLTRGFV 381

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +         +   +  D  V            +G          N ++    +     
Sbjct: 382 LQDTVEQLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKRPQCKVCR 441

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                + S +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 442 SHPVVKSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRDGLKPRCITRD- 500

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 501 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 559

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 560 PFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADIW 619

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 620 RFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMVLTH 678

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---D 442
            D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K +     
Sbjct: 679 DDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGDEMDRQ 738

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +++ I   L + +        S    L  G  + 
Sbjct: 739 RAGTVTGMAVNIAALLSVMLQPYMPTVSSTIQTQLQLPEAACRILATSFICTLPAGHRIG 798

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 799 -TVSPLFQKL 807


>gi|114644161|ref|XP_509164.2| PREDICTED: methionine-tRNA synthetase [Pan troglodytes]
          Length = 900

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 222/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 LSAYQDKLLS----------YYESHPEFILPIERRN-----EVISFVKSGLKDLSLSRKT 213
                                 E      LP             S+++ GLK   ++R  
Sbjct: 440 SCPVVQSTQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|149715335|ref|XP_001488941.1| PREDICTED: methionyl-tRNA synthetase [Equus caballus]
          Length = 900

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLFSRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         +   +  D  V            +G          N  +  + +    R
Sbjct: 380 LQDTVEQLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINATELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLEKRLEEWLENTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVSLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +          +    L  G ++ 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACGILLTNFLCTLPAGHLIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|187649784|sp|A9LZS9|SYM_NEIM0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 685

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 126/532 (23%), Positives = 219/532 (41%), Gaps = 50/532 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +R   V    +     L   L   +P+ A      L +  E   + +  + L
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRETL 527


>gi|256389800|ref|YP_003111364.1| methionyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256356026|gb|ACU69523.1| methionyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 605

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 151/593 (25%), Positives = 246/593 (41%), Gaps = 91/593 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +  +  + A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I  
Sbjct: 3   STQRTILTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPILV 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +   D+ +R   +    L ++YD F RTT + H+   + ++K + D G I+
Sbjct: 63  QADKEGVTARELADRYNRVIAEDLQSLGLAYDLFTRTTTRNHYAVVQEIFKGLYDNGYIF 122

Query: 121 KGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV------------------ 157
                G  S          Y        G DG   +   N                    
Sbjct: 123 PKTTMGAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPDRLIDPRSRINGE 182

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +++E E +F  L A+   L  + +    +   + + +  +      L+  ++SR   D
Sbjct: 183 TPKFIETEQFFLDLPAFASVLGGWLQQQKTWRPNVLKFSLNLLDD---LQPRAISRD-LD 238

Query: 216 WGIKIPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---W--------PAD 259
           WG+ +P +     P   +YVW DA+  YL+ +       G    +   W        P  
Sbjct: 239 WGVPVPLEGWVDRPDKKLYVWFDAVVGYLSASVEWARRTGDPDAWRAFWQTGPNGEAPDA 298

Query: 260 LHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISK 305
            + +GKD + FH+  WPA LL  +              L LP +V S  F+  +G K S 
Sbjct: 299 YYFMGKDNIVFHSEIWPAMLLGYDGRGEKNGKPGSLGALNLPHEVVSSEFLTMEGRKFSS 358

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S   VI   + +     DALRY++       +D  +      +R N +L  G GNLV+R+
Sbjct: 359 SRAVVIYVRDFLSRYDADALRYYITAAGPETQDTDFTWSEFLRRNNDELVAGWGNLVNRA 418

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +SM  K+   + P     T  DE++L+        + + +       ALA+ + LV+E +
Sbjct: 419 ISMAAKNLGQI-PAAKDLTAEDEALLATSRGAFAVVGDLLDRCRFKAALAEAMRLVAEAN 477

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----- 480
           +Y    +PW+L KT+P+R +TVL+VT++V+     LL  F+P  + K+F +L        
Sbjct: 478 KYVSDHEPWKLAKTDPERMATVLHVTLQVVDDAKTLLTPFLPFSSEKVFHLLGGEGTWSA 537

Query: 481 -DENRCFQSLDQRLKPGFML----------------------HKTFDPIFPRF 510
             E R  + LD    PG+ +                           PIF + 
Sbjct: 538 MPELREVEDLDGG--PGYPVLTGDYEQALARWESTPIEAGRPLAPPTPIFKKL 588


>gi|303256180|ref|ZP_07342196.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860909|gb|EFL83984.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 700

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 137/553 (24%), Positives = 234/553 (42%), Gaps = 52/553 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R  ++++TA+ Y N   H GH  E I AD+  R  R+ G  V F    D HG  I  
Sbjct: 1   MTNR-TIFLTTALPYANGNFHFGHIMEYIQADIWVRHQRMCGSTVHFVGADDAHGAPIMI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +AQ  GVT + +V + S       D   I +D +  T  K + +  + ++K++   G IY
Sbjct: 60  SAQKKGVTPQEYVAEISAGRAKYLDGFFIRFDHWHSTDSKENTELAQDIYKRLKKAGLIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV------------ 157
                 +Y    + +  D  +             G   +   + + P             
Sbjct: 120 SKEIEQYYDPVRQMFLADRFIKGTCPKCGAPDQYGDSCEVCASVYRPTDLINPYSALSGS 179

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-------ISFVKSGLKDLS 208
             +  + + +FF+LS           +         R                  L D  
Sbjct: 180 KLELRKSKHFFFKLSDPNCVEFLRQWTRSTAPDGTPRLQSQIVAKTAEWLGKDGDLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGYLDNPDGSKAKFWPADLHVI 263
           +SR    +GI+IPD+P    YVW+DA   Y             N +          +H+I
Sbjct: 240 ISRDAPYFGIEIPDEPGKFFYVWLDAPIGYLASLKAYCESKGINFEALLETSTTEQIHII 299

Query: 264 GKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEV 320
           GKDI  FH ++WPA L  +  P   P  V++HGF+   G+K+SKS G  +DP+  +   +
Sbjct: 300 GKDIAYFHTLFWPAMLHFSGKPFRVPDHVWAHGFVTVDGQKMSKSRGTGLDPLVYLELGM 359

Query: 321 GVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LRY+   ++    +D  +       R N+DL     N+ SRS   ++K ++G +  
Sbjct: 360 DPEWLRYYFAYKLNSKVEDVDFSSADFISRTNSDLVGKYVNIASRSAGFLVKRFEGRVSD 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P     ++ S+++       +I  + +++   +AL  V+ L ++V+ Y D ++PWEL K 
Sbjct: 420 PAI---AESSLIAEIKAAAPDINASFEDREYGKALRAVMELANKVNEYVDQKQPWELAKQ 476

Query: 440 NPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            P+RA+    V  VT+E  R L + L+  +P+ A  +   L   +    + S+D  L   
Sbjct: 477 -PERAAELHAVCSVTLEAFRLLTLFLKPVLPRTAENVETFLNCGE--LTWNSVDNALSSD 533

Query: 497 FMLHKTFDPIFPR 509
             ++  F  +  R
Sbjct: 534 KPIN-PFKHLMKR 545


>gi|298370508|ref|ZP_06981824.1| methionine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281968|gb|EFI23457.1| methionine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 685

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 224/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
           T     +L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 T-----LLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   + +  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWANTCETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|255529999|ref|YP_003090371.1| methionyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255342983|gb|ACU02309.1| methionyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 702

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 138/564 (24%), Positives = 245/564 (43%), Gaps = 64/564 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ A+ Y N   HIGH A   + AD   R+ R +  DV F  G+DE+G  I   A+
Sbjct: 7   KRYTVTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVPITLKAK 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +V VD+  +   D      +S+D + RT+   HH T    ++ + +KG   +  
Sbjct: 67  KEGVTPQVIVDKYHKIIGDSFKEFGVSFDIYHRTSSLMHHQTASDFFETLYNKGVFTEEV 126

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHN--------------------PVQ 158
              +Y  + + +  D          G +  Y +   N                    P  
Sbjct: 127 TEQYYDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTLSGEPPV 186

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E   +F  L  Y+++L  Y + H E+        +  S++ +GL+  +++R   DWG+
Sbjct: 187 RKETRNWFLPLDKYEEQLRKYIDGHKEWK--PNVFGQCQSWLNAGLQPRAMTRD-LDWGV 243

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSK--------------------AKFW 256
           K+P       ++YVW DA   Y++ T  L                            + +
Sbjct: 244 KVPLKDAEGKVLYVWFDAPIGYISATKELFEYARLDVWNPKAEEYYINQSEVEKGSWEDY 303

Query: 257 PAD-----LHVIGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNV 310
             D     +H IGKD + FH I +PA L+   +  L   V ++ F+  +G+KIS S    
Sbjct: 304 WKDEEAKLVHFIGKDNIVFHCIIFPAMLMAHGDYILADNVPANEFLNLEGQKISTSKNWA 363

Query: 311 IDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +   E +EE     D LRY L       KD  +     + R N +L   +GN V+R V +
Sbjct: 364 VWLNEYLEEFKDKQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFVNRVVVL 423

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K + G +P     T  D+ ++   +    +I  +++N     AL +V+++    ++Y 
Sbjct: 424 THKYFKGKVPMCMHITPEDQQVMDELAAAPAKISASIENYRFREALGEVMNVARLGNKYL 483

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              +PW++ KT+ DR  T+L +++++   L IL++ F+P  A+K+  +L        ++S
Sbjct: 484 ADTEPWKVIKTDEDRVRTILNISLQIAANLEILIEPFLPFTADKLMKMLNYGG--HTWES 541

Query: 489 LD--QRLKPGFMLHKTFDPIFPRF 510
                 L  G  L++    +F + 
Sbjct: 542 AGNVNLLHRGHQLNEPVL-LFEKI 564


>gi|326560048|gb|EGE10443.1| methionyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 683

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 122/545 (22%), Positives = 219/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +  G +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMGHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR    +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDAPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L K    D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLAPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFIP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|147669013|ref|YP_001213831.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|187647716|sp|A5FS74|SYM_DEHSB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146269961|gb|ABQ16953.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 553

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 141/541 (26%), Positives = 241/541 (44%), Gaps = 39/541 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  + F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQ 158
               +      +  D  V                                      NP +
Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L+ + E+   +       N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWR--TNVLNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD---LHVIGKDILRF 270
            +P        +YVW +A+  YL+ +           +  K+W  D    + IGKD + F
Sbjct: 240 PLPLPGYEGKRLYVWFEAVIGYLSASKEWAASKGQPNAWQKYWGVDTKSYYFIGKDNIPF 299

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+    L LP  V S+ ++  + +K SKS  N I   +V+   GVD LRY L
Sbjct: 300 HTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYLL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +      +R N +L    GNL  R ++M+ ++YD  +P  G   E   +
Sbjct: 360 SANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSLT 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++   + +L E  + + N     A+   ++L  E +RY D + PW+  K +   A+  LY
Sbjct: 420 LIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSLY 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V +  +  L +    F+P+ + ++   L    E      + +    G  L    +P+F +
Sbjct: 480 VAMVALSGLRVAFYPFLPESSGRLSTYLGFGSELEKEGWILKMPVVGQELT-PPEPLFKK 538

Query: 510 F 510
            
Sbjct: 539 L 539


>gi|331001236|ref|ZP_08324862.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
 gi|329568963|gb|EGG50759.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
          Length = 700

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 137/553 (24%), Positives = 233/553 (42%), Gaps = 52/553 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R  ++++TA+ Y N   H GH  E I AD+  R  R+ G  V F    D HG  I  
Sbjct: 1   MTNR-TIFLTTALPYANGNFHFGHIMEYIQADIWVRHQRMCGSTVHFVGADDAHGAPIMI 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +AQ  GVT + +V + S       D   I +D +  T  K + +  + ++K++   G IY
Sbjct: 60  SAQKKGVTPQEYVAEISAGRAKYLDGFFIRFDHWHSTDSKENTELAQDIYKRLKKAGLIY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV------------ 157
                 +Y    + +  D  +             G   +   + + P             
Sbjct: 120 SKEIEQYYDPVRQMFLADRFIKGTCPKCGAPDQYGDSCEVCASVYRPTDLINPYSALSGS 179

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-------ISFVKSGLKDLS 208
             +  + + +FF+LS           +         R                  L D  
Sbjct: 180 KLELRKSKHFFFKLSDPNCVEFLRQWTRSTAPDGTPRLQSQIVAKTAEWLGKDGDLSDWD 239

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNY-----LTTTGYLDNPDGSKAKFWPADLHVI 263
           +SR    +GI+IPD+P    YVW+DA   Y             N +          +H+I
Sbjct: 240 ISRDAPYFGIEIPDEPGKFFYVWLDAPIGYLASLKAYCESKGINFEALLETSTTEQIHII 299

Query: 264 GKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEV 320
           GKDI  FH ++WPA L  +  P   P  V++HGF+   G+K+SKS G  +DP+  +   +
Sbjct: 300 GKDIAYFHTLFWPAMLHFSGKPFRVPDHVWAHGFVTVDGQKMSKSRGTGLDPLVYLELGM 359

Query: 321 GVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LRY+   ++    +D  +       R N+DL     N+ SRS   ++K ++G +  
Sbjct: 360 DPEWLRYYFAYKLNSKVEDVDFSSADFISRTNSDLVGKYVNIASRSAGFLVKRFEGRVSD 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P     ++ S+++       +I  + + +   +AL  V+ L ++V+ Y D ++PWEL K 
Sbjct: 420 PAI---AESSLIAEIKAAAPDINASFEGREYGKALRAVMELANKVNEYVDQKQPWELAKQ 476

Query: 440 NPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            P+RA+    V  VT+E  R L + L+  +P+ A  +   L   +    + S+D  L   
Sbjct: 477 -PERAAELHAVCSVTLEAFRLLTLFLKPVLPRTAENVETFLNCGE--LTWNSVDNALSSD 533

Query: 497 FMLHKTFDPIFPR 509
             ++  F  +  R
Sbjct: 534 KPIN-PFKHLMKR 545


>gi|146281645|ref|YP_001171798.1| methionyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569850|gb|ABP78956.1| methionyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 692

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 123/545 (22%), Positives = 223/545 (40%), Gaps = 46/545 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  ++ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I  
Sbjct: 14  MSEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIML 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +               +++D+F  T    + +   +++ ++ D G I 
Sbjct: 74  RAEKEGITPEQLIANVQAEHSADFADFLVNFDNFHSTHSPENRELAELIYTRLRDAGHIA 133

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE------- 162
               + ++      +  D            E   G + +   A + P +  +        
Sbjct: 134 TRSVTQYFDPEKGMFLADRFIKGTCPRCAAEDQYGDNCEKCGATYEPTELKDPRSAISGA 193

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + +FF+L  ++  L  +        L     N++  ++  GL++  +SR    
Sbjct: 194 TPVLKDSKHFFFKLPDFEAMLKEWTRGGA---LQESVANKIAEWLDGGLQEWDISRDAPY 250

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDIL 268
           +G +IP +P    YVW+DA   Y+ +   L           FW  +      H IGKDI+
Sbjct: 251 FGFEIPGEPGKYFYVWLDAPIGYMASFQNLCKRRPELSFDAFWSKESSAELYHFIGKDII 310

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HG++   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 311 NFHTLFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYY 370

Query: 329 LVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + D   ++VN+DL   + N+ SR    I K  DG++       E  
Sbjct: 371 YASKLGRGVDDLDLNLDDFVQKVNSDLVGKVVNIASRCAGFIHKGNDGVMVEANPEPE-- 428

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
             + +        I +  + +   RA+ ++++L    + +   + PW L K    +A   
Sbjct: 429 --LWAAFQAAAPSIADAYEARDFARAMREIMALADRANAWIADKAPWALNKVEGKQAEVQ 486

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  + V + RQL I L+  +P LA      L VA  +    +    L     L+  F P
Sbjct: 487 EICALGVNLFRQLVIFLKPVLPNLAAAAEQFLNVAPLSWDDHA---TLLANHKLNA-FTP 542

Query: 506 IFPRF 510
           +  R 
Sbjct: 543 LMTRI 547


>gi|157106644|ref|XP_001649418.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108868809|gb|EAT33034.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 966

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 120/549 (21%), Positives = 216/549 (39%), Gaps = 44/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      
Sbjct: 254 GQKNNLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETK 313

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T K   D+       +     I +D F RTT        + ++K +   G I  
Sbjct: 314 ALAENLTPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIET 373

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                    + + Y  D  V              +G          N ++ +        
Sbjct: 374 RAVDQLLCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCN 433

Query: 169 LS-------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            S                +  L  +    E       R    +++K GLK   ++R    
Sbjct: 434 TSPIIRQSSQFFLDLPKIEPKLREWVDKAEHGWTHNARVITRAWLKEGLKSRCITRD-LK 492

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLH-VIGKDILR 269
           WGI +P +     + YVW DA   Y++ T           +       DL+  + KD + 
Sbjct: 493 WGIPVPLEGYEDKVFYVWFDAPIGYISMTSRYSKEWKQWWQPSAETKVDLYQFMAKDNVP 552

Query: 270 FHAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALR 326
           FH++ +PA    +     L   + +  ++ ++  K SKS G  +   +     +  D  R
Sbjct: 553 FHSVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWR 612

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N +L   +GN V+R++    K +D +IP P    E 
Sbjct: 613 FYLCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEE 671

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D ++L++ +R L+     M+   +   +  ++ +    ++   A++PW L K   D   R
Sbjct: 672 DFTLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTR 731

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHK 501
           A TV+ +   +   LA L+  F+P  A  ++  L V+      +    R  L  G  + K
Sbjct: 732 AGTVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVSSGQIESEKPQMRIFLPSGHKIGK 791

Query: 502 TFDPIFPRF 510
               +F + 
Sbjct: 792 PA-VLFNKI 799


>gi|289432281|ref|YP_003462154.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946001|gb|ADC73698.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 553

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 142/541 (26%), Positives = 242/541 (44%), Gaps = 39/541 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  + F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQ 158
               +      +  D  V                                      NP +
Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L+ + E+   +       N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWR--TNVLNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD---LHVIGKDILRF 270
            +P        +YVW +A+T YL+ +           +  K+W  D    + IGKD + F
Sbjct: 240 PLPLPGYEGKRLYVWFEAVTGYLSASKEWAASKGQPNAWQKYWGVDTKSYYFIGKDNIPF 299

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+    L LP  V S+ ++  + +K SKS  N I   +V+   GVD LRY L
Sbjct: 300 HTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYLL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +      +R N +L    GNL  R ++M+ ++YD  +P  G   E   +
Sbjct: 360 SANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSLT 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++   + +L E  + + N     A+   ++L  E +RY D + PW+  K +   A+  LY
Sbjct: 420 LIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSLY 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V +  +  L +    F+P+ + ++   L    E      + +    G  L    +P+F +
Sbjct: 480 VAMVALSGLRVAFYPFLPESSGRLSTYLGFGSELEKEGWILKMPVVGQELT-PPEPLFKK 538

Query: 510 F 510
            
Sbjct: 539 L 539


>gi|73748231|ref|YP_307470.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123732537|sp|Q3ZZB2|SYM_DEHSC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|73659947|emb|CAI82554.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 553

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 141/541 (26%), Positives = 241/541 (44%), Gaps = 39/541 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  + F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIYKNT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQ 158
               +      +  D  V                                      NP +
Sbjct: 123 VCQPFCSHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L+ + E+   +       N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELIRWVETKTHWR--TNVLNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD---LHVIGKDILRF 270
            +P        +YVW +A+  YL+ +           +  K+W  D    + IGKD + F
Sbjct: 240 PLPLPGYEGKRLYVWFEAVIGYLSASKEWAASKGQPNAWQKYWGGDTKSYYFIGKDNIPF 299

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+    L LP  V S+ ++  + +K SKS  N I   +V+   GVD LRY L
Sbjct: 300 HTIIWPAMLMGKGGLNLPYDVPSNEYLTTESQKFSKSRNNAIWVDDVLSRYGVDTLRYLL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +      +R N +L    GNL  R ++M+ ++YD  +P  G   E   +
Sbjct: 360 SANMPESSDTDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNYDNKVPEYGELDERSLT 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++   + +L E  + + N     A+   ++L  E +RY D + PW+  K +   A+  LY
Sbjct: 420 LIEKTAAMLCETDKALYNCNFREAIRLAMALAQEANRYLDEKAPWKEIKVDKAAAARSLY 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V +  +  L +    F+P+ + ++   L    E      + +    G  L    +P+F +
Sbjct: 480 VAMVALSGLRVAFYPFLPESSGRLSTYLGFGSELEKESWILKMPVVGQELT-PPEPLFKK 538

Query: 510 F 510
            
Sbjct: 539 L 539


>gi|189083764|ref|NP_001121131.1| methionyl-tRNA synthetase [Rattus norvegicus]
          Length = 902

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 262 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 321

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT        + +++++  +G +
Sbjct: 322 TKAMEEGLTPQEICDKYHAIHVDIYRWFNISFDTFGRTTTPLQTKITQDIFQRLLTRGFV 381

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +         +   +  D  V            +G          N ++    +     
Sbjct: 382 LQDTVEQLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKRPQCKVCR 441

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                + S +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 442 SHPVVKSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNARFIIRSWLRDGLKPRCITRD- 500

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 501 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 559

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 560 PFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSRGIGVFGDMAQDTGIPADIW 619

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 620 RFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMVLTH 678

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---D 442
            D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K +     
Sbjct: 679 DDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGDEMDRQ 738

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +++ I   L + +        S    L  G  + 
Sbjct: 739 RAGTVTGMAVNIAALLSVMLQPYMPTVSSTIQTQLQLPEAACRILATSFICTLPAGHRIG 798

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 799 -TVSPLFQKL 807


>gi|161869048|ref|YP_001598214.1| methionyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|304388827|ref|ZP_07370882.1| methionine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|161594601|gb|ABX72261.1| methionyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|304337231|gb|EFM03410.1| methionine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 720

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 126/532 (23%), Positives = 219/532 (41%), Gaps = 50/532 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 38  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 98  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 217

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 277

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 278 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 337

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 338 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 397

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 398 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 454

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 455 --ADSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 512

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +R   V    +     L   L   +P+ A      L +  E   + +  + L
Sbjct: 513 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRETL 562


>gi|194881221|ref|XP_001974747.1| GG20938 [Drosophila erecta]
 gi|190657934|gb|EDV55147.1| GG20938 [Drosophila erecta]
          Length = 1021

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 121/549 (22%), Positives = 224/549 (40%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AEKLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    +++K GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P +   + + YVW DA   Y++ T           +  PA+         + KD + 
Sbjct: 493 IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAEGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKRHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K+++  +P     T+ 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVP-EVVTTQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           +  +L++ +R L+    +M+   +   +  ++S+    + Y  +Q+PW L K N D   R
Sbjct: 670 ELVLLALINRELRGYINSMEKAKLRDGIRHLLSISRHCNGYMQSQQPWVLLKGNDDQKAR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
           AST++ + V +   LA LL  ++P  A  +F  L         +   +   L+ G  + K
Sbjct: 730 ASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLRAGHKIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 PA-PLFAKL 797


>gi|241760687|ref|ZP_04758779.1| methionine--tRNA ligase [Neisseria flavescens SK114]
 gi|241318868|gb|EER55394.1| methionine--tRNA ligase [Neisseria flavescens SK114]
          Length = 685

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 226/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   + K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFLSKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   + +  + L  G  ++K
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWANTRETL-GGHAINK 534

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 535 -YEHLMQR 541


>gi|83814986|ref|YP_445678.1| methionyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|123753405|sp|Q2S2A3|SYM_SALRD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83756380|gb|ABC44493.1| methionyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 713

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 132/571 (23%), Positives = 245/571 (42%), Gaps = 65/571 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
              E+L ++ A+ Y N   HIGH A   + AD+  R+ RL G DV F  G+DE G  I  
Sbjct: 5   TSSERLLVTAALPYANGPIHIGHLAGAYLPADLFVRYQRLKGEDVAFICGSDEMGVAILM 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +  +D      RD  +   +S+D + RT+ + H +T +  ++ + + G   
Sbjct: 65  RAIREDRTPEDIIDTYHPQIRDNFERFGMSFDYYGRTSSETHTETTQDFFRVLDENGGFD 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
                  Y    E +  D  V             G   +   +  +P +           
Sbjct: 125 LKTDEQLYDPEAEMFLADRFVIGTCPVCGFEEAYGDQCEQCGSSLSPTELENPQSTLTDA 184

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
              + E   ++  L   Q +L  +  SHPE+        ++ S+   GLK  +++R    
Sbjct: 185 TPEFKETTHWYLPLGELQPQLEEWIGSHPEWK--NNVVGQIQSWFDEGLKGRAITRD-VL 241

Query: 216 WGIKIPDD---------PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD----- 259
           WG+ +PDD            ++YVW DA   Y++ T     +  +      +  D     
Sbjct: 242 WGVPVPDDVAERHGLEAEGKVIYVWFDAPIGYISATKEWAAEQGEPDAWTDYWQDEDTRL 301

Query: 260 LHVIGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +H IGKD + FH + +P+ L+   +  LP  V ++ F+  +GEK+S S G  +   E ++
Sbjct: 302 VHFIGKDNIVFHCLMFPSMLMEHGDYVLPDNVPANEFLNLEGEKLSTSRGWAVWLHEYLD 361

Query: 319 EVG-----VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +        D LRY L   +   KD  +  +G ++RVN +LAN  GN V R+++   + +
Sbjct: 362 DFADERHAPDLLRYALATTLPETKDADFSWEGFQQRVNGELANVFGNFVHRTLTFAQRYF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           DG +P     +E+D  +L   + V   +    +      A+ + ++L    ++YF+  +P
Sbjct: 422 DGTVPPLEDPSEADRVMLDRMAEVPDTVGAAYEEHRTRDAVFETMALARRGNKYFNDTEP 481

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-------- 485
           W   +++P   +  ++V+++V   L+IL +  +P  A  + + + + +            
Sbjct: 482 WHTHESDPQACANTIHVSLQVCAALSILFEPVLPSAAATLRERIGLENVRTSTPDDDPAG 541

Query: 486 ---FQSLDQRLKP-GFMLHKT--FDPIFPRF 510
              ++     L P G  +      +P+F + 
Sbjct: 542 AVGWEDAGAPLLPAGHPIPSGPDPEPLFQKI 572


>gi|301761326|ref|XP_002916060.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 900

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 223/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSRHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVNLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDRRLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +   I   L +          +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVGGTIQAQLQLPPPACRVLLTNFVCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|224824466|ref|ZP_03697573.1| methionyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224602959|gb|EEG09135.1| methionyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 702

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 144/561 (25%), Positives = 227/561 (40%), Gaps = 56/561 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  DV  RF ++ G    +    D HG  I  
Sbjct: 1   MTSPRKILVTSALPYANGAIHLGHMVEHIQTDVWVRFQKMRGHACHYVCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+T +  +++             I YD++  T    +      +++ +   G I 
Sbjct: 61  AAEKQGITPEQLIERVKAEHLADFTGFHIGYDNYYSTNSPENKHFAEHIYRTLRANGKIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------- 162
                  +    + +  D  V             G + +   A ++P             
Sbjct: 121 SRTIEQLFDPEKQMFLPDRFVKGECPKCGAKDQYGDNCESCGATYSPTDLKNPYSAVSGA 180

Query: 163 -------EGYFFRLSAYQDKLLSYY-------ESHPEFILPIERRNEVISFVKSGLKDLS 208
                  E YFFRL    D L ++        +   +  L  E  N++  +++ GL D  
Sbjct: 181 TPVLKSSEHYFFRLGDCADFLKAWTAGSSVRPDGETQPHLQHESLNKMNEWIEGGLHDWD 240

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHV 262
           +SR    +G +IPD P    YVW+DA   Y+ +   L    G     +  P       H 
Sbjct: 241 ISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCEKSGLDFDDYFGPDSDAELYHF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVG 321
           IGKDIL FHA++WPA L  +    P  VF+HGF+   G+K+SKS G  I     +   + 
Sbjct: 301 IGKDILYFHALFWPAMLKYSGYRAPTGVFAHGFLTVDGQKMSKSRGTFITAKSYLDCGLN 360

Query: 322 VDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            + +RY++  +  A  +D     D    RVN+DL     N+ SR+   I K + G +   
Sbjct: 361 PEWMRYYVAAKLNARIEDIDLSLDDFVARVNSDLIGKFVNIASRAAGFITKRFGGRLAES 420

Query: 381 GAFTES----------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            + +            +  +L   +     +    + +   RAL  V++L  EV+ Y D 
Sbjct: 421 VSSSALASPVCHAAQCEHPLLQQLAESSATLAAAYEAREYARALRDVMALADEVNAYVDT 480

Query: 431 QKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            KPWEL K      R   V  V V   R LAI L+  +PKLA  +   L VA     +  
Sbjct: 481 NKPWELAKQEGMEARLHEVCTVLVNAFRLLAIYLKPVLPKLAADVEAFLNVAP--LTWDD 538

Query: 489 LDQRLKPGFMLHKTFDPIFPR 509
            D  L  G  + K +  +  R
Sbjct: 539 ADTLLL-GHTI-KPYQHLMQR 557


>gi|71008184|ref|XP_758191.1| hypothetical protein UM02044.1 [Ustilago maydis 521]
 gi|46097863|gb|EAK83096.1| hypothetical protein UM02044.1 [Ustilago maydis 521]
          Length = 634

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 190/574 (33%), Positives = 291/574 (50%), Gaps = 70/574 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFH-----------RLDGLDV-------- 45
           +  Y++T I Y NA PHIGH Y  +IAD LAR+H             DG +         
Sbjct: 60  KPYYVTTPIFYVNADPHIGHLYSDVIADALARYHGYMRSGYSTYNHCDGPNPSTNSMTDM 119

Query: 46  ---LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
              +F+TGTDEHG K+ K A+ A    +   D+ S+ F+ +AD  +ISY  FIRTT+  H
Sbjct: 120 VRPMFSTGTDEHGLKMQKVAEAASEDPRALCDRISQRFKHLADAANISYTHFIRTTDTDH 179

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPV 157
                 LW+ + DKG IY+G + GWY++ DEA+Y + +V       G + +        V
Sbjct: 180 KVAVEHLWRTLRDKGHIYQGSHEGWYAVSDEAFYPEGQVKTVVGEDGKEVRQSIETGAKV 239

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFD 215
           +W +E  Y FRLS +Q  L+ +  ++P+ I P ++  EV++ V++GL DLS+SR      
Sbjct: 240 EWSQEVNYKFRLSNFQKPLVEWLRANPKAIQPAQKHAEVLAEVEAGLTDLSISRPSSRLS 299

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDIL 268
           WGI++P+D ++ +YVW+DALTNYLT  GY       +A+        WPAD+HV+GKDI+
Sbjct: 300 WGIRVPEDDEHSIYVWVDALTNYLTAAGYPFAASTGQAEGNVALSSAWPADVHVVGKDIV 359

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           RFHAIYWPA LL+A LPLP+ + +H        K+SKS GNV +P E I+  G+DALR+F
Sbjct: 360 RFHAIYWPAMLLAAGLPLPRTILAHSHWTMNKAKMSKSRGNVANPFEAIDTFGLDALRFF 419

Query: 329 LVR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS----VSMILKDYDGMIPTPGAF 383
           L+R     G D  Y+   L +     L   +GNLVSR     +   L D+     T    
Sbjct: 420 LLRVGGNFGSDSDYNPTVLVEYHRKYLQGQLGNLVSRICAPKIHARLNDFARDAATHVLH 479

Query: 384 TESDE---------------SILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRY 427
               E               ++ +  +++   +   M +  + + L  ++  +++  +  
Sbjct: 480 RPLKEQVELHMDSESLSLCTALETSLTQLPANVDALMSDFEVAKVLELILESVIASTNEL 539

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--- 484
               +PW    T+P      + +  E +R  A+LLQ F+P+  + + D L +   +R   
Sbjct: 540 IQRLEPWS-ASTHPVVVLETVVLVTESLRISALLLQPFMPQKMSALLDTLKIPQGSRRHP 598

Query: 485 ---CFQSLDQRLKPGFML-----HKTFDPIFPRF 510
                   D RL    ++          P+FPR 
Sbjct: 599 KDLVVTDTDGRLVS-HVVQRSESEGKPHPLFPRI 631


>gi|1702932|emb|CAA64381.1| yeast methionyl-tRNA synthetase homolog [Homo sapiens]
          Length = 900

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 224/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 440 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L   +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLGHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|241203365|ref|YP_002974461.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857255|gb|ACS54922.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 514

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 172/494 (34%), Positives = 264/494 (53%), Gaps = 30/494 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            +YI+T+I Y NA PH+G A E++ AD  AR  RL G DV F  GTD++  K  ++A+ A
Sbjct: 3   TIYITTSIPYVNAAPHVGFALELVQADAYARHFRLLGQDVRFQCGTDDNSLKNVRSAEAA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKGCY 124
           G+  K FVD N+  F  +  +LDIS ++F+RT+ + RH      LW+  +  GD+Y+  Y
Sbjct: 63  GLPVKDFVDANADRFERLGGLLDISNEEFVRTSRDPRHIACVHALWRACAGHGDLYRKAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y   E+  G            ++ + EE +FFRLS Y D+L+   ES  
Sbjct: 123 EGLYCVGCEQFYEPSELDDG----RCPEHGIALETIREENWFFRLSRYGDRLIELVESGE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFD---WGIKIPDDPQYIMYVWIDALTNYLTT 241
             I+P  RRNEV++ ++ GL D+S+SR       WG+ +  D   ++YVW DAL NYLT 
Sbjct: 179 LRIVPAHRRNEVLALLRRGLTDISVSRSAERARGWGVPV-PDEDEVVYVWFDALANYLTG 237

Query: 242 TGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
                + +    ++W     +HV+GK I +FHAIYWPA LLSA LP P  +  HG++   
Sbjct: 238 LS-HGSDETLLPRYWNGGQRIHVVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVTVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G+KI KS GN IDP  +I+     DALRY+L+R I    DG +  + L+   + +LA  +
Sbjct: 297 GKKIGKSAGNGIDPERIIQSYATPDALRYYLLRHIRSADDGDFSAERLEAAWSGELAGQL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL +R ++++   +DG++P        D + +   +R+  ++ E      +H  LA + 
Sbjct: 357 GNLANRVLALLSTSFDGIVPPV-----PDSAFVEEAARLPAKVAEAFDAYELHVGLADIF 411

Query: 419 SLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVT------VEVIRQLAILLQAFV 466
           + + E +R F  + PW   K      T  DR +T   +       V  +  +A  L  F+
Sbjct: 412 AFIGEANRRFTKRAPWADAKALLADLTPEDRKATAARLGSSLAEQVYGLAIIARCLLPFL 471

Query: 467 PKLANKIFDILFVA 480
           P  A K+   L + 
Sbjct: 472 PSSATKLHSRLGIP 485


>gi|73540380|ref|YP_294900.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123760249|sp|Q474X7|SYM_RALEJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72117793|gb|AAZ60056.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 688

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 127/536 (23%), Positives = 214/536 (39%), Gaps = 46/536 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+ 
Sbjct: 4   RRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D++  T  + + + C  ++  +     I +   
Sbjct: 64  EGITPKQLIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAEREV 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +     + P                 
Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVR 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG----LKDLSLSRKTFD 215
                +FF+LS  + +         +   P             G    L D  +SR    
Sbjct: 184 KSSTHFFFKLSDPRCETFLREWVA-DLAQPEAANKMQEWLGSEGEASTLSDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W  P       H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     +   +  + LRY+
Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYY 362

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  A  +D   + D    RVN+DL     N+ SR+   ++K ++G +          
Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKVDEAALAHP-- 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--AS 445
             +L        ++ +  + +   +AL  V+ L   V+ + D +KPWEL K    R    
Sbjct: 421 --LLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDEAKRSALH 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               V++E  R L + L+  VP +A  +   L V  E   ++++D++L     +  
Sbjct: 479 AACSVSLEAFRLLTVYLKPVVPTVAAGVERFLNV--EPLDWRAIDKQLSASSPVQA 532


>gi|261391580|emb|CAX49018.1| methionyl-tRNA synthetase (methionine--tRNA ligase; MetRS)
           [Neisseria meningitidis 8013]
 gi|325131203|gb|EGC53918.1| methionyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325135409|gb|EGC58030.1| methionyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325201222|gb|ADY96676.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207084|gb|ADZ02536.1| methionyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 685

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            +I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             SD ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTATNAARFLNLD----AITWTNTRVTLGKHAIN 533

Query: 502 TFDPIFPR 509
            +  +  R
Sbjct: 534 KYKHLMQR 541


>gi|147898905|ref|NP_001086723.1| methionyl-tRNA synthetase [Xenopus laevis]
 gi|50603650|gb|AAH77353.1| Mars-prov protein [Xenopus laevis]
          Length = 905

 Score =  320 bits (820), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 121/549 (22%), Positives = 237/549 (43%), Gaps = 43/549 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  + + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 258 VEGEKNILITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYICGTDEYGTATE 317

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+ +     +    +IS+D F RTT ++     + ++ ++ ++  +
Sbjct: 318 TKAMEEGLTPQQICDKYNAVHTAIYQWFNISFDYFGRTTTQQQTTIAQDIFHRLLERDFL 377

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                        + +  D  V            +G          N V+  + +    +
Sbjct: 378 LTDTVEQLRCETCKRFLADRFVEGICPFCNYEEARGDQCDKCGKLINAVELKKPQCKVCK 437

Query: 169 LSA------YQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
            S       +    L   E   E  L     +            S+++ GLK   ++R  
Sbjct: 438 QSPVIKSSKHLFLDLPKLEKRLEQWLEQSFSSGDWTSNARFITRSWIRDGLKPRCITRD- 496

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P D     + YVW DA   Y++ T    +      K  P  +   + + KD +
Sbjct: 497 LKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEMWWKS-PQQVQLYNFMAKDNV 555

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P+ LL A  N  L   + +  ++ ++  K SKS G  +      E  +  D  
Sbjct: 556 PFHSVIFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGVGVFGDMAQETGIPADIW 615

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN V+R+   + K ++G +P     +E
Sbjct: 616 RFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAAMFVQKFFNGCVPEMELLSE 675

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            D+ +L+  +  LQ+  + ++   I  AL  ++++    ++Y    +PW+  K N +   
Sbjct: 676 -DKRLLAQVAAELQQFNQLLEKVRIRDALRCILNISRHGNQYIQVNEPWKCIKGNQEEQK 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPGFMLHK 501
           RA TV  V V +   L+++L  ++P ++  I + L +  E++        RL+ G  +  
Sbjct: 735 RAGTVTGVAVNMAALLSVMLHPYMPTISGVIQEQLLMPQESKVLTTDFCCRLQSGHRIGN 794

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 795 -VSPLFQKL 802


>gi|325135247|gb|EGC57870.1| methionyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 685

 Score =  320 bits (820), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 226/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLDECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +PK+A      L +  E   + +  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL--GKHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|84000155|ref|NP_001033180.1| methionyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110816437|sp|Q2T9L8|SYMC_BOVIN RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83405370|gb|AAI11363.1| Methionyl-tRNA synthetase [Bos taurus]
          Length = 898

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L    +  E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWEKWWKN-PEQVNLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH I +P+  L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +          +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILPTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|319777619|ref|YP_004137270.1| methionyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038694|gb|ADV34893.1| Methionyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 514

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 160/487 (32%), Positives = 257/487 (52%), Gaps = 7/487 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  YI+T I Y +   HIGH Y  I+A V+  + R+ G D    TG+DEHGQKI +
Sbjct: 1   MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A    K +VD   +++++M    +I YD F RTTE  H    + ++     KG IY
Sbjct: 61  KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G YS++DE +   ++        Y+ +  + +  MEEE YFF+++  Q     Y 
Sbjct: 121 KGSYQGLYSVQDEEFLTKNQAVYKDGKYYHPSSKHELINMEEESYFFKMNEVQKWWSKYN 180

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP+F+LP +  NE+ +   K GL+DLS++R    W I   DDP++ +YVW DAL NY+
Sbjct: 181 KKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALFNYI 240

Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  G+  N        +  +    +H++GK+I RFH IYWP  L    + LP  + SHG 
Sbjct: 241 TKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVSHGL 300

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K G K+SKSL NVI P  + ++   + ++Y+   +I  G+DG + ++ LK+ VNADL
Sbjct: 301 LRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVNADL 360

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +   +       +  + I         + +++M    I +  
Sbjct: 361 INNYGNLVSRTLKMIHNSFPKGLLYSVNSKKIHKDIEKEIKNFSAQFQKHMDAFEIDKGF 420

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            + I L +++++Y D   PW+L     +    +L   +  I  ++  LQ  +P    ++ 
Sbjct: 421 KKAIELSAKLNKYIDETTPWKLT-DKLEELEPILVRLLNGIYAVSCALQIVLPTKIKEVA 479

Query: 475 DILFVAD 481
            +L V  
Sbjct: 480 SVLKVKK 486


>gi|88604058|ref|YP_504236.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189520|gb|ABD42517.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 690

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 125/544 (22%), Positives = 230/544 (42%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R  L ++  + Y N   H+GH    + AD   RF R  G +V+F  G+D HG  I  
Sbjct: 27  MNSRP-LLVTCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEEVVFICGSDNHGTPIVV 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G T +   ++   +F D    + + +D F  T +   H   + L  ++ D+G +Y
Sbjct: 86  SAEKEGTTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHARTKHLVSRLIDRGYVY 145

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY-------------------------YNAQHN 155
                  Y +  + +  D  +                                      N
Sbjct: 146 PKVIQQAYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPGEILEPTCKICGN 205

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             ++ E+E +FF+LS +QD L  Y     E        N  + +V   L D  ++R T +
Sbjct: 206 RAEYREQEHFFFKLSGFQDWLREYL---GELKGTDNAINYALGWVNEDLHDWCITR-TLE 261

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           WG+K P     ++YVW+DA   Y+  T       G   K +         H IG+DI   
Sbjct: 262 WGVKFPGHDDLVVYVWVDAPIGYIGFTEEWAEKTGRDWKTYWCGENTRVTHFIGQDITYH 321

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYF 328
           H ++WPA L  A    P  V + G +     K SKS G V+   E  + + +  D LRY+
Sbjct: 322 HCVFWPAMLHGAGYGTPYAVVASGMLKIDDHKFSKSRGYVVWTNEDYLDQGLPADYLRYY 381

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+   +  K+  +     ++R+N ++ N +GN + RS+ +  K + G+          ++
Sbjct: 382 LLSYTSHTKEMNFSWQLFQERINNEVVNNLGNFIYRSLHLSQKQFGGVP-----EGVVEQ 436

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            I    +  + ++   ++      A+  +++L +  + Y  +++PW+L KT+    + V+
Sbjct: 437 EIFDRITEAIGQVTGLVEAYDFKGAVDAILALSAWGNTYIQSKEPWKLAKTDQAAMAQVM 496

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLHKTFDPI 506
              +++ + L +L++  +P+ A  I+  L       N  F +  + L PG +       +
Sbjct: 497 RNCLQLAKALTLLIEPVMPERAGLIWSQLGQDSLIANNGFSAGLEPLSPGPL--PAPSIV 554

Query: 507 FPRF 510
           F + 
Sbjct: 555 FSKI 558


>gi|325145467|gb|EGC67741.1| methionyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 685

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 226/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLDECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +PK+A      L +  E   + +  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL--GKHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|326519092|dbj|BAJ96545.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 635

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 112/532 (21%), Positives = 219/532 (41%), Gaps = 46/532 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G    
Sbjct: 51  VAGRRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGHNVLYVCGTDEYGTATE 110

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G +     D+     +++ +  +I++D F RT+  +  + C+ ++ K+ D   +
Sbjct: 111 NRALEEGCSPLQICDKYHAIHKEVYEWFNINFDHFGRTSTPQQTEICQSIFSKLLDNNWL 170

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG-- 164
            +      Y    + +  D  V              +G          N  + ++     
Sbjct: 171 SENTMQQLYCESCQRFLADRFVVGSCPVEGCGNDTARGDQCDRCGRLLNSTELIDPRCKV 230

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSR 211
                  R + +    L   +   E                     +++K GLK   ++R
Sbjct: 231 CEGIPIVRDTDHLFLELPLLKEQLEKYIDEASATGSWSQNAVRITNAWLKEGLKPRCITR 290

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 291 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITA-CYTPEWEKWWKNPENVELYQFMGKD 348

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVD 323
            + FH + +P+ LL         K +    ++ ++  K SK+ G  +   +     +  D
Sbjct: 349 NVPFHTVMFPSALLGTGENWTLMKNISVTEYLNYESGKFSKTKGIGVFGNDAKATNIPAD 408

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +  +GL+ + N +L N +GN + R +S I K     Y  +IP 
Sbjct: 409 VWRYYLLSNRPEASDAVFTWEGLQIKHNNELINNLGNFIYRVLSFIAKPEGAGYGSIIPE 468

Query: 380 --PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                     +S+      ++++  + M    + + L   +++ SE + Y    + W+L 
Sbjct: 469 APNANTHPLSQSLAETVGNLIEQYIDAMDKVKLKQGLKIAMAISSEGNAYLQESQFWKLY 528

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
           K +P   +TV+  +  ++  LA LL+ F+P  +  +   L +   E+  F  
Sbjct: 529 KQDPASCATVMKTSAGLVYLLACLLEPFMPSFSKDVLQQLNLCPKEHISFAD 580


>gi|319409554|emb|CBY89844.1| methionyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 717

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 35  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            +I YD++  T    +    + +++ +   G I     
Sbjct: 95  QGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 154

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 155 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 214

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 215 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 274

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 275 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 334

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 335 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 394

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 395 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV--- 451

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             SD ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 452 --SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 509

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 510 ERLHEVCSELINAFTMLTAYLAPVLPQTATNAARFLNLD----AITWTNTRVTLGKHAIN 565

Query: 502 TFDPIFPR 509
            +  +  R
Sbjct: 566 KYKHLMQR 573


>gi|21673797|ref|NP_661862.1| methionyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|25009343|sp|P59077|SYM_CHLTE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21646926|gb|AAM72204.1| methionyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 703

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 130/559 (23%), Positives = 231/559 (41%), Gaps = 56/559 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G DV+   G+DEHG  I   A 
Sbjct: 6   KRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLCGHDVIHIGGSDEHGVPITITAD 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  VD+      +      IS+D + RT+   HH T R  + +I  KG   K  
Sbjct: 66  KEGISPQEVVDRYHTMNAEAFAKCGISFDYYGRTSGPVHHQTAREFFLEIEKKGIFVKKT 125

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
              ++  +   + +D  +             G   +      +P + ++ +         
Sbjct: 126 EKQFFDPKAGRFLSDRYITGTCPVCKTPGANGDQCEQCGTHLSPTELIDPKSKLSDATPE 185

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 ++F L  YQ +L ++ E H          N   +++  GL D +++R    WGI
Sbjct: 186 LRETLHWYFPLGRYQKQLEAFVERHTGDWR-SNVVNYSRTWLNQGLADRAITRD-LAWGI 243

Query: 219 KIPDD----PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
            +P D       ++YVW DA+  Y++ T        D    + +  D     ++ IGKD 
Sbjct: 244 SLPLDSEEAKGKVLYVWFDAVLGYISFTKEWAEKQGDAELWRRYWQDPETRIINFIGKDN 303

Query: 268 LRFHAIYWPAFLL-------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + FH + +PA L+            L   V +  F+  +G K SKS    +   E +E  
Sbjct: 304 VVFHTLMFPAILMAWNEGRSEGRYELADNVPASEFMNFEGRKFSKSRNYAVYLGEFLERF 363

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D LRY +       KD  +     + R N +LA+ +GN + RS+      + G +P  
Sbjct: 364 PADTLRYSIAMNYPENKDTDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSRFGGQVPAD 423

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                 D   +   +    ++           A AQ + +    +R+    +PW++ K +
Sbjct: 424 IDLEAWDSLGIDWLAS-FGKLEAAYDGFHFREATAQTMEIARFANRFLTESEPWKVIKVD 482

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---------QSLDQ 491
           P+ A   + V++ +   LA+L    VP+ AN+I+ +L                  Q+L+ 
Sbjct: 483 PEAAGRTMAVSLNLCHTLALLFWPIVPETANRIWKMLGFEGTIDELVEPGNPVWRQALEP 542

Query: 492 RLKPGFMLHKTFDPIFPRF 510
            LK G  L  + + +F + 
Sbjct: 543 GLKKGHKLLGSSEILFSKI 561


>gi|319638779|ref|ZP_07993538.1| methionyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400020|gb|EFV80682.1| methionyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 685

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 225/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +      +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSEQIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 KQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +PK+A      L +  E   + +  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|238809991|dbj|BAH69781.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 516

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 160/487 (32%), Positives = 257/487 (52%), Gaps = 7/487 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  YI+T I Y +   HIGH Y  I+A V+  + R+ G D    TG+DEHGQKI +
Sbjct: 3   MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKRVLGYDAKLLTGSDEHGQKIQE 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A    K +VD   +++++M    +I YD F RTTE  H    + ++     KG IY
Sbjct: 63  KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G YS++DE +   ++        Y+ +  + +  MEEE YFF+++  Q     Y 
Sbjct: 123 KGSYQGLYSVQDEEFLTKNQAVYKDGKYYHPSSKHELINMEEESYFFKMNEVQKWWSKYN 182

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP+F+LP +  NE+ +   K GL+DLS++R    W I   DDP++ +YVW DAL NY+
Sbjct: 183 KKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALFNYI 242

Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  G+  N        +  +    +H++GK+I RFH IYWP  L    + LP  + SHG 
Sbjct: 243 TKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVSHGL 302

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K G K+SKSL NVI P  + ++   + ++Y+   +I  G+DG + ++ LK+ VNADL
Sbjct: 303 LRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVNADL 362

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +   +       +  + I         + +++M    I +  
Sbjct: 363 INNYGNLVSRTLKMIHNSFPKGLLYSVNSKKIHKDIEKEIKNFSAQFQKHMDAFEIDKGF 422

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            + I L +++++Y D   PW+L     +    +L   +  I  ++  LQ  +P    ++ 
Sbjct: 423 KKAIELSAKLNKYIDETTPWKLT-DKLEELEPILVRLLNGIYAVSCALQIVLPTKIKEVA 481

Query: 475 DILFVAD 481
            +L V  
Sbjct: 482 SVLKVKK 488


>gi|157105436|ref|XP_001648869.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108869023|gb|EAT33248.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 966

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 120/549 (21%), Positives = 216/549 (39%), Gaps = 44/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   I++A+ Y N  PH+G+    ++ ADV AR+ RL G + L+  GTDE+G      
Sbjct: 254 GQKNNLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLCGYNTLYICGTDEYGTATETK 313

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T K   D+       +     I +D F RTT        + ++K +   G I  
Sbjct: 314 ALAENLTPKQICDKYFEIHNSIYRWFGIGFDYFGRTTTAEQTQIVQDMFKDLYAGGFIET 373

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                    + + Y  D  V              +G          N ++ +        
Sbjct: 374 RAVDQLLCQKCDRYLADRFVEGTCPYPGCGYEDARGDQCDACGKLINAIELVRPRCKVCN 433

Query: 169 LS-------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            S                +  L  +    E       R    +++K GLK   ++R    
Sbjct: 434 TSPIIRQSSQFFLDLPKIEPKLREWVDKAEHGWTHNARVITRAWLKEGLKSRCITRD-LK 492

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLH-VIGKDILR 269
           WGI +P +     + YVW DA   Y++ T           +       DL+  + KD + 
Sbjct: 493 WGIPVPLEGYEDKVFYVWFDAPIGYISMTSRYSKEWKQWWQPSAETKVDLYQFMAKDNVP 552

Query: 270 FHAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALR 326
           FH++ +PA    +     L   + +  ++ ++  K SKS G  +   +     +  D  R
Sbjct: 553 FHSVMFPASLIGIDKGYTLVSHIMATEYLNYEDGKFSKSRGVGVFGNDAHDTGIPADVWR 612

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N +L   +GN V+R++    K +D +IP P    E 
Sbjct: 613 FYLCSSRPEGQDSSFSWNDLAARNNNELLKNLGNFVNRALVFCEKYFDSIIP-PMVLNEE 671

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D ++L++ +R L+     M+   +   +  ++ +    ++   A++PW L K   D   R
Sbjct: 672 DFTLLALINRDLKGYVHQMEKARLRDGIRHLLGISRYGNQLMQAEEPWVLVKGTDDQKTR 731

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHK 501
           A TV+ +   +   LA L+  F+P  A  ++  L V+      +    R  L  G  + K
Sbjct: 732 AGTVIGLCCNLACVLATLIFPFMPSTARNLYAQLNVSSGQIESEKPQMRIFLPSGHKIDK 791

Query: 502 TFDPIFPRF 510
               +F + 
Sbjct: 792 PA-VLFNKI 799


>gi|91773875|ref|YP_566567.1| methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121691622|sp|Q12UQ9|SYM_METBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91712890|gb|ABE52817.1| Methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 684

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 118/541 (21%), Positives = 222/541 (41%), Gaps = 43/541 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
             + + ++  + Y N + H+GH    + AD+  R  +  G +V F  G+D HG  I   A
Sbjct: 6   SEKPVLVTCGLPYANGKAHVGHLRTYVPADIFTRSLKKTGQEVTFVCGSDTHGTPIVFNA 65

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +    T    +    ++F ++   + +  D F  T +  +H+    +  K+ + G +Y  
Sbjct: 66  EELKTTPTEIIKVYHKHFDEIFKKMGVMLDAFGTTDDPTNHNRTTEIVSKLIENGYVYPK 125

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQY-------------------------YNAQHNPV 157
                Y    +    D  V                                     + P 
Sbjct: 126 TIEIAYCPSCDRSLPDRYVKGTCPHCKKEARGDECDQGCGKHLEPGELEHPACTTCNGPA 185

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           ++ ++E +FF+LS ++D LL Y          +  RN  + +VK  L D  ++R + DWG
Sbjct: 186 EYKQQEHFFFKLSQFKDFLLEYL---EGLGGTLNARNYALGWVKQELTDWCITR-SLDWG 241

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAI 273
           IK P     ++YVW+DA   Y+  T      +    + +  D    +H IG DI+  H I
Sbjct: 242 IKFPGHEDLVVYVWVDAPIGYIAFTEEWAEANNESWEKFWKDDGSIIHFIGGDIIYHHCI 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVR 331
           +WPA L  A    P  V + G +  +    SKS G V+   E  +      D LRY+L  
Sbjct: 302 FWPAMLKGAGYNQPDAVVASGMVKIEDRTFSKSRGYVVWVDEDYLDHGFHQDLLRYYLAS 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  K+  +     + +VN +L    GN + R++    K++  +        E  + IL
Sbjct: 362 YTSHTKELNFSWKVFQDKVNTELVGVFGNFLYRTLLFTHKNFGEIP-----EGEVKQDIL 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +  ++  +E M+N    +    V++L S  + YF + +PW+L K N +    ++   
Sbjct: 417 DEINTTIENAKEAMENYEFKKYADTVMALASYGNTYFQSNEPWKLIKENKEACGEIVKNC 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            ++ + L +L +  +P+   + +  + +  +     +    + +K G  L K    +F +
Sbjct: 477 AQITKALCLLFEPILPEKMEEAWKQIGMETDVHETNYMEATELVKSGTTLEKP-SILFEK 535

Query: 510 F 510
            
Sbjct: 536 I 536


>gi|160872857|ref|ZP_02062989.1| methionyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121656|gb|EDP46994.1| methionyl-tRNA synthetase [Rickettsiella grylli]
          Length = 553

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 144/544 (26%), Positives = 246/544 (45%), Gaps = 45/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   KL +++A+ Y N   HIGH  E I AD+  RF ++ G   +F +G D HG  I  A
Sbjct: 3   QTPRKLLVTSALPYANGPLHIGHLLEHIQADIWVRFQKIRGHHCIFISGEDAHGTPIMLA 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ   ++ +  V + +   +       I +D+F  T    +    R +++++ +KG+IYK
Sbjct: 63  AQQRNISPEALVREIADAHQHDLTDFFIEFDNFYTTHSPENEALTRFIYQRMKEKGNIYK 122

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW----------- 159
                 Y    + +  D  V             G + +   + ++P+             
Sbjct: 123 KRIKQAYDPSAKMFLPDRYVKGACPCCKALDQYGDNCEVCGSTYSPLDLLDPKSIITGTS 182

Query: 160 ---MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFFRLS Y + L  +        L  E  N+++ + K GL DL +SR    +
Sbjct: 183 PVVKESEHYFFRLSDYTEFLHQWITQED--HLADEISNKLLEWFKEGLHDLDISRDAPYF 240

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFW--PAD---LHVIGKDILR 269
           G KIP       YVWIDA   Y+ +   L +        ++W  P      H IGKDI+ 
Sbjct: 241 GFKIPGTENKFFYVWIDAPIGYMASFKNLCSRHSDLHFDEYWSCPTTTELYHFIGKDIIN 300

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHAI+WPA L SAN   P  +F HG++   G+K+SKS G  I     +  +  + LRY+ 
Sbjct: 301 FHAIFWPAILKSANFRSPTAIFVHGYVTVNGQKMSKSRGTFISARHYLNHLDPEYLRYYY 360

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++   +D  ++     +++N+DL   + N+ SR  S I K +   +         + 
Sbjct: 361 ATKLSRKTEDIDFNLHDFIQKINSDLIGKLVNIASRCASFINKKFAHQLSK----NLLNP 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
           +++    R   EI  + +    +RA+  ++ L  + ++  DA+KPW L K   + +RA  
Sbjct: 417 ALMETFIRQGDEISSHYEALNYNRAMKLIMELADKANQMIDAEKPWLLIKNPNSVERAHA 476

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + + + R L + L+  +P  A K+   L +      +   ++ L     ++ TF P+
Sbjct: 477 VCSLGLNLFRILILYLKPVLPMTAKKVERFLNIP--TLTWNQREKGL-FDHRIN-TFTPL 532

Query: 507 FPRF 510
             R 
Sbjct: 533 LQRI 536


>gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica]
 gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica]
          Length = 532

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 175/495 (35%), Positives = 269/495 (54%), Gaps = 25/495 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y++T I YPNA+PH+GH Y M++ADV+ R++ L+G D    TG DEHG KI  AA+   +
Sbjct: 23  YVTTPIFYPNAEPHVGHLYSMVLADVIKRYNGLNGKDTYLLTGIDEHGLKIQTAAEKLNL 82

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K+  DQ +  F+ +A+V +I  + F+RTT+  H +T   +W +++  G IYKG +SG+
Sbjct: 83  QPKILCDQLAEKFKQLAEVGNIDNNRFMRTTDADHVNTVNDMWDRLTKAGYIYKGSHSGY 142

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y + DE YY  D+ ++             V+W EEE YFFRLSA +DKLL +Y ++PEF+
Sbjct: 143 YCVSDETYYPRDKCHEVNGRLVSIETGKEVEWTEEENYFFRLSAMRDKLLEFYNANPEFV 202

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           +P E    ++  V   L DLS+SR T    WGI +P D   ++YVW+DAL NY T  G+ 
Sbjct: 203 MPKEVYRGIVDEVSRDLPDLSISRPTNRLSWGIPVPGDDSQVIYVWLDALVNYATAQGFD 262

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                         +H++GKDI RFHAIYWPAFLL+A +  PK V  H   + +G+K+SK
Sbjct: 263 TVS---------EAVHIVGKDIQRFHAIYWPAFLLAAGIKPPKSVLVHSHWISEGQKMSK 313

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR- 364
           S+GNV+DP+ VI + G D++R+ L+ +    KD  + +  + ++ N  L N +GNL+ R 
Sbjct: 314 SIGNVVDPMHVISKYGSDSVRFLLMCDGHLHKDNDFTETKIAEKHNTMLVNKLGNLLMRI 373

Query: 365 -SVSMILKD----------YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            S    L D           D        FT +   ++     +    + +M      + 
Sbjct: 374 TSAKFNLVDSLEQPRQKTVEDMAEFFGPEFTTTRNELIRALKELPDVYKADMARGSTPKT 433

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +  +  +++  +++ +  KPW  K    +  + +L    E  R   IL+Q F P+ A K 
Sbjct: 434 ITDLYYVINLANKHVEETKPWSFK--EKEIPAMILREAAETARIALILMQPFTPEFATKG 491

Query: 474 FDILFVADENRCFQS 488
            D L V  E R  + 
Sbjct: 492 LDRLGVKKERRTMEW 506


>gi|294787920|ref|ZP_06753164.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294484213|gb|EFG31896.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 683

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 129/548 (23%), Positives = 231/548 (42%), Gaps = 46/548 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K+ +++A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I  
Sbjct: 1   MTQKRKILVTSALPYANGAIHLGHMVEHIQTDIWVRFQKLRGHECHYCCADDTHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AAQ  G+T +  + +             I+YD++  T    +      +++ +     I 
Sbjct: 61  AAQKQGMTPEQMIAKTHTEHLADFTGFGIAYDNYYSTHSPENKSHSERIYRALKANNKII 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ----------- 158
               +  +    + +  D  V             G + +     + P             
Sbjct: 121 SKNINQLFDPEKQMFLPDRFVKGECPKCHAKDQYGDNCEVCGTTYAPTDLINPYSAVSGA 180

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIERRNEVISFVKSG-LKDLSLSRK 212
                E E +FF+LS   D L ++   E++    L  E  N++  ++K G L D  +SR 
Sbjct: 181 TPIMKETEHFFFKLSDCADYLKAWTSGETNGRAHLQPEALNKMNEWLKDGELADWDISRD 240

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKD 266
              +G +IPD+P    YVW+DA   Y+ +     +    +   F+  D      H IGKD
Sbjct: 241 APYFGFEIPDEPNKYFYVWLDAPVGYMASFQNLCERNGLNFDDFFGKDSQAELYHFIGKD 300

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDAL 325
           IL FHA++W A L  +    P  +F+HGF+   G+K+SKS G  I     +   +  + L
Sbjct: 301 ILYFHALFWTAMLEYSGHRAPNGIFAHGFLTVDGQKMSKSRGTFITAKSYLDLGLNPEWL 360

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY++  +  +  +D   + +    R+N+DL     N+ SR+   I K + G +      T
Sbjct: 361 RYYIAAKLNSKIEDIDLNLNDFIARINSDLIGKYINIASRAAGFIHKKFSGSLKDVSQST 420

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PD 442
                ++   +   + I ++ +++  ++AL +++ L   V+ Y DA KPWEL K +    
Sbjct: 421 -----LIKQLTEQSESIAQDYESREYNKALREIMGLADLVNEYVDANKPWELAKQDGMES 475

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           R   V    +   + L   L   +P L+ +    L V  E   +      L     ++  
Sbjct: 476 RLHEVCSELINAFKILTAYLFPVLPNLSAQATAFLNV--EKLDWTHTVSTLPENHKIN-P 532

Query: 503 FDPIFPRF 510
           ++ +  R 
Sbjct: 533 YNHLMQRI 540


>gi|298242482|ref|ZP_06966289.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555536|gb|EFH89400.1| methionyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 558

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 139/549 (25%), Positives = 237/549 (43%), Gaps = 46/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + +  A  Y     H+G      + AD  AR+HR+ G  VL  +G+DEHG  I   A+
Sbjct: 3   EHILVCVAWPYAKTSTHVGQVVGAYLPADTFARYHRMAGNQVLMVSGSDEHGTPILVDAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ + FV +  +   ++ + L IS+D +  T  + H+   +  +  + DKG I+K  
Sbjct: 63  RQGISPREFVARYHQQICEVWERLGISWDLYTETGTENHYRITQDFFLTLYDKGYIFKDT 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------- 157
               Y   D  +  D  +            +G          +PV               
Sbjct: 123 MQSPYCPTDRRFLPDRYIEGTCPHCGYDSARGDQCDNCGKTLDPVDLIRPRCRLCGSKTS 182

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  + E +F  L   Q+ L  +     E   P       ++++K GL+  +++R   D
Sbjct: 183 TLEMRQTEHFFLDLPKLQEPLAEWLNQGKEHWRP-NTLAFALNWIKEGLRARAITRD-LD 240

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD---------LHV 262
           WG+ IP +      +YVW DA+  Y + +             K W             + 
Sbjct: 241 WGVPIPIEGYEDKRIYVWFDAVIGYFSASVEWAEKQGKPEAWKTWWVPGQTDPAVKAYYF 300

Query: 263 IGKDILRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           IGKD + FH I WPA LL   N  LP  V ++ F+   G K S S GNVI   +V+E   
Sbjct: 301 IGKDNIPFHTIIWPAMLLGYGNRNLPYDVPANEFMTMSGAKASSSRGNVIWTRDVLERYS 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY+L      G+D  +  D + +R N +L    GN V R+++ +   + G++P P 
Sbjct: 361 ADTLRYYLSATAPEGRDTDFTFDEMLRRNNDELVATYGNAVHRTLTFLQSKFGGVVPEPR 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E+D +IL+   R  +++  +++   +   L   + +    +RY D Q PW+  K + 
Sbjct: 421 ELNEADRAILAEVERGYKQVAHSIEQCHLKDGLQAAMVVARAANRYLDEQAPWKQIKVDR 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           + A T +YV ++V+  L IL   ++P  + K+ + L    +        + +     L K
Sbjct: 481 EAAGTTIYVMLQVLSALRILFCPYLPFSSQKLHEYLGFTGDVSKQAWRQEGVAANATLPK 540

Query: 502 TFDPIFPRF 510
              P+FP+ 
Sbjct: 541 PA-PLFPKL 548


>gi|189502608|ref|YP_001958325.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498049|gb|ACE06596.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 557

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 128/541 (23%), Positives = 237/541 (43%), Gaps = 39/541 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I+ A+ Y N   HIGH A   I AD+ AR+ R    +V+F +G+DEHG  I   AQ 
Sbjct: 9   RYTITAALPYANGPIHIGHLAGVYIPADIYARYLRSKKKEVIFISGSDEHGVPITIRAQQ 68

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  VD+     +     L IS+D F RT+ + HH T    +  + +KG +     
Sbjct: 69  EGITPQQIVDKYHHLNKQNLQDLGISFDIFSRTSSEVHHQTASDFFTTLYNKGILIAKET 128

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +      +P + ++            
Sbjct: 129 EQYYDPASHQFLADRYIRGTCPKCGYTDAYGDQCEVCGTTLSPEELIDPRSALSGETPIL 188

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + ++  L  Y++  L ++              +  S+++ GL+  +++R   DWG+ 
Sbjct: 189 KATKHWYLPLDKYENW-LKHWILETHTDWKSNVYGQCKSWLEQGLQPRAVTRD-LDWGVP 246

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           +P       ++YVW DA   Y++ T      +    + +  D     +H +GKD + FH 
Sbjct: 247 VPLPEAYHKVLYVWFDAPIGYISATKEWAIENNQNWEPFWKDSTTKLVHFVGKDNIVFHC 306

Query: 273 IYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFL 329
           I +P          LP++V ++ F+   G KIS S  + +   E +E      D LRY L
Sbjct: 307 IIFPVMLQAHEGYILPEQVPANEFMNLAGGKISTSRNHAVWLHEYLENFKGQQDVLRYVL 366

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  KD  +     + + N +L   +GN V+R++ +I K Y G++P   +   +D++
Sbjct: 367 CVNAPEAKDSDFTWQDFQAKNNNELVATLGNFVNRTLVLIQKYYAGIVPEMTSLIHTDQA 426

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           I+         I ++++      A+ + + L    ++Y     PW L KT P++  T+L 
Sbjct: 427 IIIQMQEAADSIGQSIEKYRFKEAIQKWMDLARAGNKYLADTAPWHLIKTMPEQVQTILN 486

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +++++   +AIL   F+P  + K+  +L + + +       + +KPG +L      +F R
Sbjct: 487 ISLQLTAHIAILGAPFLPFTSQKLSQMLLLDNLDWDNAGSMEIIKPGTLLPAPTL-LFER 545

Query: 510 F 510
            
Sbjct: 546 I 546


>gi|319944052|ref|ZP_08018332.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
 gi|319742813|gb|EFV95220.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
          Length = 789

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 139/560 (24%), Positives = 230/560 (41%), Gaps = 60/560 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+L+I+TA+ Y N   HIGH  E I AD+  RF R+ G DVLF    D HG  I   AQ 
Sbjct: 69  ERLFITTALPYANGSFHIGHIMEYIQADIWVRFQRMLGKDVLFVGADDAHGAPIMLKAQA 128

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   IS+D +  T    +    + +++++   G +     
Sbjct: 129 EGITPEELVARIAAERPYYLNGYHISFDHWHSTHSPENTALSQEIYRRLKAAGLVATRTI 188

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++    E +  D  +             G   +  +  + P   +             
Sbjct: 189 EQFFDPVKEMFLPDRYIKGECPNCHAKDQYGDACEVCSKVYAPTDLINPYSTLTGSTPVI 248

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--------------FVKSGLK 205
              E YFF LS  + +   +       + P                          + L 
Sbjct: 249 RSSEHYFFSLSDPRCRQFLHDWLAQGRLQPEVANKAREWLGSDATDGEAAEGEGAGNPLA 308

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--P------ 257
           D  +SR    +GI IPD P    YVW+DA   YL +   L    G     +  P      
Sbjct: 309 DWDISRDEPYFGIPIPDAPGKYFYVWLDAPVGYLASLKALCEKRGLDFDAFIDPQAGQDP 368

Query: 258 ----ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
                 +H IGKDI+ FH ++WPA L  A +  P  +F HGF+   GEK+SKS G  + P
Sbjct: 369 QRPYRQVHFIGKDIIYFHTLFWPAMLKFAGMHTPDNIFVHGFLTISGEKMSKSRGTGLSP 428

Query: 314 IEVIE-EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            + +E  +  + LRY+L  ++    +D  ++ +    RVN+DL   + N+ SRS   ILK
Sbjct: 429 KKYLELGMNPEWLRYYLAAKLNSRVEDVDFNAEDFVARVNSDLVGKLVNIASRSAGFILK 488

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            +DG +      T +     +        + E  + +   +A+  +++L   V+++ DA+
Sbjct: 489 RFDGRLAAASPATLA---AFAESWPGADTLAELYEQRDYAKAMRAIMALADRVNQFVDAE 545

Query: 432 KPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           KPWEL K      +   V    +    QL  LL   +P  A +    L +  +   +  +
Sbjct: 546 KPWELAKDPAQTAKLHEVCSDALRGFAQLIALLAPVLPDTAARAAAFLNLP-QPFTWAMV 604

Query: 490 DQRLKPGFMLHKTFDPIFPR 509
           ++ L  G  + + F  +  R
Sbjct: 605 NEPLPAGHTI-QPFQHLMQR 623


>gi|307207156|gb|EFN84946.1| Methionyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 566

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 174/499 (34%), Positives = 264/499 (52%), Gaps = 24/499 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           I+T I Y NA PHIGH Y  ++AD +AR+H + G      TGTDEHG KI  AA  AG+ 
Sbjct: 43  ITTPIFYVNAGPHIGHLYSAVLADAIARYHAMLGHRTFLITGTDEHGNKIKAAAAAAGLP 102

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              +  + S+ FR++ D  ++ Y  FIRTTEK+H D     WK++ ++G IY G Y+GWY
Sbjct: 103 NLEYCTKVSQQFRELCDRFEVDYSRFIRTTEKQHCDAVHHFWKRLEERGHIYLGKYAGWY 162

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            + DEA+ +D E+ +  D      +      N V+W EEE Y FRLSA QD L  + +  
Sbjct: 163 CVSDEAFLSDAELVEQKDSTGETIKVSAESGNTVEWTEEENYKFRLSALQDDLKYWLKDE 222

Query: 184 PEFILPIERRNEVISFVKSGLK----DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                P      +  +V+ G       +S +R    W +  P +  + +YVW+DAL NYL
Sbjct: 223 NTVR-PALYHKILSEWVEEGTCLRDLSISRTRNKVPWAMLSPCNESHSIYVWMDALVNYL 281

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY   P+ S  +FWP  + VIGKDIL+FH +YWPAFL++A L  PK +  H   +  
Sbjct: 282 TALGY---PNESFKEFWPPAVQVIGKDILKFHGVYWPAFLIAAGLEPPKTLLCHAHWIVD 338

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SKS GNVI P E   +   D LRYF++RE     D  Y    +   +N++LA+ +G
Sbjct: 339 HQKMSKSKGNVISPFEAANDYSEDGLRYFILREAVPQNDTNYSSTKITNVLNSELADTLG 398

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           NLVSR     + +     P P  +     +E           + ++ R++ +   +H  +
Sbjct: 399 NLVSRCAGKTV-NPSREFPDPAKYWNVLQSEVANETREALQSLGEKTRKSYEEYNLHHVV 457

Query: 415 AQVISLVSEVDRYFDAQKPWELKK--TNPD---RASTVLYVTVEVIRQLAILLQAFVPKL 469
             V+S +   ++     +PW L+K   + D       V+ + +E  R  A++LQ  VP+L
Sbjct: 458 DAVMSALHSANKMVAHHEPWHLRKRVDDTDSMRELKAVISLALESSRIAALILQPIVPRL 517

Query: 470 ANKIFDILFVADENRCFQS 488
           ++ + D L ++ ENR +  
Sbjct: 518 SSSLLDFLNISKENRTWAD 536


>gi|148692550|gb|EDL24497.1| methionine-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 856

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 121/550 (22%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 265 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTATE 324

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+     IS+D F RTT  +     + +++++  +G +
Sbjct: 325 TKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 384

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +         R   +  D  V            +G          N ++  + +     
Sbjct: 385 LRDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDRCGKLINAIELKKPQCKICR 444

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R S +    L   E   E  L                  S+++ GLK   ++R  
Sbjct: 445 SCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCITRD- 503

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   Y++ T         K    P  +     + KD +
Sbjct: 504 LKWGTPVPLEGFEDKVFYVWFDATIGYVSITA-NYTDQWEKWWKNPEQVDLYQFMAKDNV 562

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P  +L A  N  L K + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 563 PFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPADIW 622

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P   A T 
Sbjct: 623 RFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVP-EMALTP 681

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +++  S  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 682 DDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQ 741

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +++ I   L +          S    L  G  + 
Sbjct: 742 RAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRILATSFICTLPAGHRIG 801

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 802 -TVSPLFQKL 810


>gi|46123063|ref|XP_386085.1| hypothetical protein FG05909.1 [Gibberella zeae PH-1]
          Length = 784

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 180/496 (36%), Positives = 262/496 (52%), Gaps = 38/496 (7%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ DVL R+  ++G +    TGTDEHG KI +AA   G++ K   D NS  FRD+A+V 
Sbjct: 1   MVLTDVLKRWKTINGKEAYLCTGTDEHGMKIQQAALKEGISPKELCDNNSNKFRDLAEVS 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEV-- 141
           +IS+D FIRTT++ H D  +  W  +  +      +YKG + GWY + DE +Y +D V  
Sbjct: 61  NISHDFFIRTTDQEHKDVVQQFWLLLKARAPEGLGLYKGKHEGWYCVSDECFYPEDLVEP 120

Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G          N V+W+ E  +FF LS Y+DKLL +Y+ +P++I P  R NEV 
Sbjct: 121 SVVPQTGRKIMASTETGNEVEWIAEHTWFFPLSRYKDKLLRFYDENPDWIQPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK- 254
           ++V++ L+DLS++R T   +WGI+ PDDP   +YVW+DAL NYLT  G+        A  
Sbjct: 181 NWVENHLEDLSVTRPTSRLNWGIRDPDDPTSTIYVWVDALVNYLTKAGFGTKWHADDADT 240

Query: 255 -FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+HV+GKDI+RFHA+YWPA L++A LPLPKK+  H        K+SKSLGNV++P
Sbjct: 241 GIWPADVHVVGKDIIRFHAVYWPALLMAAGLPLPKKILCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              +++  +D LRYFL+R  +   D  Y  + +      +L   IGNL +R      K++
Sbjct: 301 FSAVQKWDLDPLRYFLMRNGSLKGDMSYSNESIMVIYEKELQANIGNLFNRISR--NKNF 358

Query: 374 DGMI------------------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                                    G       S+ S        IR +M    +  AL 
Sbjct: 359 SWSTLGAVQAARNGDFDNIESSVPRGDAAPDFFSLESTLHDAPTTIRRDMDEINLSNALR 418

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLAN 471
            V  L+ E +R+    +PW++ K+    A      V+Y   E +R   ILLQ  +P  A 
Sbjct: 419 GVFELLREANRFISDTEPWKMTKSEDPNAKVLINWVIYECAEAVRIAGILLQPIMPTKAE 478

Query: 472 KIFDILFVADENRCFQ 487
           ++ D L V  E R  +
Sbjct: 479 ELLDNLGVDRERRTVE 494


>gi|296487656|gb|DAA29769.1| methionyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 898

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L    +  E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWEKWWKN-PEQVNLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH I +P+  L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSKFFGGFVP-EMVLTS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +          +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILPTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|15675970|ref|NP_273096.1| methionyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|25009401|sp|Q9K1Q0|SYM_NEIMB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7225249|gb|AAF40501.1| methionyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139494|gb|EGC62034.1| methionyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199263|gb|ADY94718.1| methionyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 685

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G    +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  E   + +    L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRDTL--GKHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|113868900|ref|YP_727389.1| methionyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|122946656|sp|Q0K7K0|SYM_RALEH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113527676|emb|CAJ94021.1| Methionyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 686

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 129/536 (24%), Positives = 217/536 (40%), Gaps = 46/536 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+ 
Sbjct: 4   RRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D++  T  + + + C  ++  +  +  I +   
Sbjct: 64  EGITPKALIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKAEDLIAEREV 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE---------- 163
             ++      +  D  +             G   +     + P                 
Sbjct: 124 EQFFDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVR 183

Query: 164 ----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG----LKDLSLSRKTFD 215
                YFF+LS  + +         +   P             G    L D  +SR    
Sbjct: 184 KSSAHYFFKLSDPRCETFLREWVA-DLAQPEAANKMQEWLGAEGEASTLSDWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVIGKDILR 269
           +G +IP  P    YVW+DA   Y  +   L    G     W  P       H IGKDIL 
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYYASFQNLAAKKGIDFDAWVGPHSTAEQYHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I     V   +  + LRY+
Sbjct: 303 FHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYVDTGMNPEWLRYY 362

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  A  +D   + D    RVN+DL     N+ SR+   ++K ++G +          
Sbjct: 363 FAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKVDEAALAHP-- 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-- 445
             +L    +   ++    + +   +AL  V+ L   V+ + D +KPWEL K    RA+  
Sbjct: 421 --LLEQLRQAAPQVAHLYEAREYSKALRLVMELTDAVNAFVDTEKPWELAKDENKRAALH 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               V++E  R L + L+  VP +A  +   L V  E   ++++D++L     +  
Sbjct: 479 AACSVSLEAFRLLTVYLKPVVPNVAAGVERFLNV--EPLDWRAIDKQLSAASPVQA 532


>gi|222083048|ref|YP_002542413.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221727727|gb|ACM30816.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 521

 Score =  319 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 173/522 (33%), Positives = 273/522 (52%), Gaps = 35/522 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T+I Y NA PH+G A E++ AD  AR  RL G DV F  GTD++  K  +AA+ AG 
Sbjct: 7   YITTSIPYVNAAPHVGFALELVQADAYARHSRLLGRDVRFQCGTDDNSLKNVRAAEAAGR 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCYSG 126
               FV +N+  F  +   L+IS D F+RT T+ RH      LW   +  GD+Y+  Y G
Sbjct: 67  PVADFVGENADRFEKLGRRLNISNDAFVRTSTDPRHITCVHSLWNACAKNGDLYRKSYEG 126

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +Y +  E +Y         D         P++ ++EE +FFRLS Y D+L    E+    
Sbjct: 127 FYCVGCEQFYE----LPDLDDGRCPEHGIPLEIVKEENWFFRLSRYGDRLRHLIETEELK 182

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFD---WGIKIPDDPQYIMYVWIDALTNYLTTTG 243
           ++P+ RRNE+++ ++ GL+D+S+SR       WG+ +P     ++YVW DAL NYLT  G
Sbjct: 183 VVPVHRRNEILALLRRGLEDISVSRSAERARGWGVPVPGT-DEVIYVWFDALANYLTGLG 241

Query: 244 YLDNPDGSKAKFWP---ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           Y  + +    ++W       H +GK I +FHAIYWPA LLSA +PLP  +F HG++   G
Sbjct: 242 Y-GSDETLFRQYWAQQGERTHFVGKGISKFHAIYWPAVLLSAGVPLPSSIFVHGYLTVDG 300

Query: 301 EKISKSLGNVIDPIEVIEEV-GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            KI KS GN IDP  ++E     DALRY+L+R I    DG + ++ L+   + +L   +G
Sbjct: 301 RKIGKSAGNGIDPDGLVEYYQTPDALRYYLLRHIRSADDGDFSEERLEAAWSGELGGQLG 360

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NLV+R ++++   + G+ P     T  D +++   + + ++I +   +  +H  L ++ S
Sbjct: 361 NLVNRVLTLLASSFSGVTP-----TVPDSALVREATGLPEKISKAFDDYELHLGLTEIFS 415

Query: 420 LVSEVDRYFDAQKPWELKKTNP------------DRASTVLYVTVEVIRQLAILLQAFVP 467
            +   +R F  + PW   K               DR    L   V  +  +A  L  F+P
Sbjct: 416 YLGSANREFTRKAPWSDAKALAGELGRAERQIISDRLGATLAEQVYGLAIVARCLLPFLP 475

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + A+++   L ++    C +  D  +    M   + + +FPR
Sbjct: 476 ESASRLHTKLGIS----CPERYDVPVAVNGMETSSGEVLFPR 513


>gi|187649786|sp|Q2FU77|SYM_METHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 664

 Score =  319 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 125/544 (22%), Positives = 230/544 (42%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R  L ++  + Y N   H+GH    + AD   RF R  G +V+F  G+D HG  I  
Sbjct: 1   MNSRP-LLVTCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEEVVFICGSDNHGTPIVV 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  G T +   ++   +F D    + + +D F  T +   H   + L  ++ D+G +Y
Sbjct: 60  SAEKEGTTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHARTKHLVSRLIDRGYVY 119

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY-------------------------YNAQHN 155
                  Y +  + +  D  +                                      N
Sbjct: 120 PKVIQQAYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPGEILEPTCKICGN 179

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             ++ E+E +FF+LS +QD L  Y     E        N  + +V   L D  ++R T +
Sbjct: 180 RAEYREQEHFFFKLSGFQDWLREYL---GELKGTDNAINYALGWVNEDLHDWCITR-TLE 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           WG+K P     ++YVW+DA   Y+  T       G   K +         H IG+DI   
Sbjct: 236 WGVKFPGHDDLVVYVWVDAPIGYIGFTEEWAEKTGRDWKTYWCGENTRVTHFIGQDITYH 295

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYF 328
           H ++WPA L  A    P  V + G +     K SKS G V+   E  + + +  D LRY+
Sbjct: 296 HCVFWPAMLHGAGYGTPYAVVASGMLKIDDHKFSKSRGYVVWTNEDYLDQGLPADYLRYY 355

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+   +  K+  +     ++R+N ++ N +GN + RS+ +  K + G+          ++
Sbjct: 356 LLSYTSHTKEMNFSWQLFQERINNEVVNNLGNFIYRSLHLSQKQFGGVP-----EGVVEQ 410

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            I    +  + ++   ++      A+  +++L +  + Y  +++PW+L KT+    + V+
Sbjct: 411 EIFDRITEAIGQVTGLVEAYDFKGAVDAILALSAWGNTYIQSKEPWKLAKTDQAAMAQVM 470

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLHKTFDPI 506
              +++ + L +L++  +P+ A  I+  L       N  F +  + L PG +       +
Sbjct: 471 RNCLQLAKALTLLIEPVMPERAGLIWSQLGQDSLIANNGFSAGLEPLSPGPL--PAPSIV 528

Query: 507 FPRF 510
           F + 
Sbjct: 529 FSKI 532


>gi|330508605|ref|YP_004385033.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328929413|gb|AEB69215.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 668

 Score =  319 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 130/538 (24%), Positives = 233/538 (43%), Gaps = 42/538 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + ++  + Y N   H+GH    + AD+  R  R  G +VLF  G+D HG  I   A+  
Sbjct: 2   PILVTCGLPYANGPCHLGHLRTYVPADIFVRGLRKMGKEVLFVCGSDSHGTPIVVNAEAQ 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T K    +  ++F ++   ++I +D F  T +   H+  + + + + + G +Y     
Sbjct: 62  GMTPKALSIKYHQHFDEIFQGMEIDFDFFGDTDDPACHNRTKEMVEALMENGYVYPREID 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQWM 160
             Y  + E +  D  V                                         ++ 
Sbjct: 122 LAYCPKCERFLPDRYVEGECPYCGKPARGDECDMGCGRHLEPGEIKNAICKVCGGRAEYR 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           ++  YFFRLS ++D LL +             RN    +V+S LKD  ++R    WG++ 
Sbjct: 182 KQTHYFFRLSGFRDFLLEHL---QTLGGTASARNYATEWVRSELKDWCITR-NMAWGVRF 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276
           P     ++YVW+DA   Y+  T       G   + +       +H IG DI+  H I+WP
Sbjct: 238 PGSDDLVVYVWVDAPIGYIAFTEEWCARSGRDWEDYWKKPSQIIHFIGGDIVYHHCIFWP 297

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREIA 334
           A L  A   LP  V + G +    +K SKS GNVI   +  +   +  D LRY+L    A
Sbjct: 298 AMLKGAGYTLPSAVVASGMLKIDDKKFSKSRGNVIWVKDDYMDRGLHPDLLRYYLASYTA 357

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K+  +  +    +VN++L    GN ++R+++  +K+++G +P      + D  +L+  
Sbjct: 358 HNKEVNFAWNIFADKVNSELVGAFGNFINRALTFSVKNFEGKVPE----GKIDADVLARI 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + E+   ++     +A   V++L    + YF + +PW+L K++ D A +VL   +++
Sbjct: 414 EETMAEVVSGLEEYEFKKATDSVMTLADYGNTYFQSHEPWKLVKSDKDAAGSVLRSCLQI 473

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L IL++  +P      +  L +  E      +     L  G  L  T + +F R 
Sbjct: 474 AKALVILMEPVMPAKMQNAWKQLGMPGEVSKIALEDALVPLDSGQSLG-TPEILFDRL 530


>gi|325205130|gb|ADZ00583.1| methionyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 684

 Score =  319 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 125/548 (22%), Positives = 222/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ARLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRVTLGEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|116250771|ref|YP_766609.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255419|emb|CAK06495.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 514

 Score =  319 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 179/522 (34%), Positives = 273/522 (52%), Gaps = 34/522 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+YI+T+I Y NA PH+G A E++ AD  AR  RL G D+ F  GTD++  K  ++A+ A
Sbjct: 3   KIYITTSIPYVNAAPHVGFALELVQADAYARHFRLLGHDIRFQCGTDDNSLKNVRSAEAA 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCY 124
           GV  K FVD N+  F  +  +LDIS ++F+RT  + RH      LW+  + KGD+Y+  Y
Sbjct: 63  GVQVKDFVDANAYRFEHLGGLLDISNEEFVRTSHDPRHIACVHALWRACAGKGDLYRKAY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E +Y   E+  G            ++ + EE +FFRLS Y D+L+   E+  
Sbjct: 123 EGLYCVGCEQFYEPSELDDG----RCPEHGIALETIREENWFFRLSRYGDRLIELIETGE 178

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFD---WGIKIPDDPQYIMYVWIDALTNYLTT 241
             I+P  RRNE+++ ++ GL D+S+SR       WG+ I  D   ++YVW DAL NYLT 
Sbjct: 179 LRIVPAHRRNEILALLRRGLTDISVSRSAERARGWGVPI-PDGDEVVYVWFDALANYLTG 237

Query: 242 TGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G   + +    ++W     +HV+GK I +FHAIYWPA LLSA LP P  +  HG++   
Sbjct: 238 LG-HGSDETLLQRYWNDGQRIHVVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYVTVD 296

Query: 300 GEKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G KI KS GN IDP  +I+  G  DALRY+L+R I  G DG +  + L+   + +LA  +
Sbjct: 297 GRKIGKSAGNGIDPERIIQTYGTPDALRYYLLRHIRSGDDGDFSAERLEAAWSGELAGQL 356

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           GNL +R ++++   + G++P        D + +   +R+  ++ E      +H  LA + 
Sbjct: 357 GNLANRVLALLSTSFGGIVPPV-----PDSAFVDEAARLPGKVAEAFDAYELHVGLADIF 411

Query: 419 SLVSEVDRYFDAQKPWELKK------TNPDRASTVLYVTV------EVIRQLAILLQAFV 466
           + + E +R F    PW   K      T  DR +T   ++         +  +A  L  F+
Sbjct: 412 AFIGEANRRFTKGAPWADAKALLADLTPEDRRATAARLSACLAEQVYGLAVVARCLLPFL 471

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
           P  A  +   L +    R +Q  D  +  G         +FP
Sbjct: 472 PSSAATLHSRLGIPA-PRLYQ--DPLILAGVK-AAPQAVLFP 509


>gi|297692235|ref|XP_002823470.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 900

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 118/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNLIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATFGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 557

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 558 PFHGLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 617

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 618 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 677 DDKRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 737 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 796

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 797 -TVSPLFQKL 805


>gi|308190251|ref|YP_003923182.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma
           fermentans JER]
 gi|307624993|gb|ADN69298.1| methionine--tRNA ligase methionyl-tRNA synthetase [Mycoplasma
           fermentans JER]
          Length = 514

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 159/487 (32%), Positives = 255/487 (52%), Gaps = 7/487 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+++  YI+T I Y +   HIGH Y  I+A V+  + +  G D    TG+DEHGQKI +
Sbjct: 1   MKKQKTFYITTPIYYASGPLHIGHLYCTIMAWVIRNYKKALGYDAKLLTGSDEHGQKIQE 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  A    K +VD   +++++M    +I YD F RTTE  H    + ++     KG IY
Sbjct: 61  KALVAKKEPKQYVDDLVKSYKEMWAKWEIDYDYFSRTTESFHEQAVQKIFSYFLQKGLIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           KG Y G YS++DE +   ++        Y+ +  + +  MEEE YFF++   Q     Y 
Sbjct: 121 KGSYQGLYSVQDEEFLTINQAVYKDGKYYHPSSKHELINMEEESYFFKMKEVQKWWSEYN 180

Query: 181 ESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           + HP+F+LP +  NE+ +   K GL+DLS++R    W I   DDP++ +YVW DAL NY+
Sbjct: 181 KKHPDFLLPKKVVNEMTNNFVKEGLEDLSVTRTNVKWAIPTIDDPKHTIYVWFDALFNYI 240

Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           T  G+  N        +  +    +H++GK+I RFH IYWP  L    + LP  + SHG 
Sbjct: 241 TKLGFDFNKPKDDFVKYWKNGDEIVHILGKEIARFHFIYWPIVLNCLGIKLPNHIVSHGL 300

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K G K+SKSL NVI P  + ++   + ++Y+   +I  G+DG + ++ LK+ VNADL
Sbjct: 301 LRDKDGLKMSKSLNNVIAPDYLFDKYHHEMIKYYFATQIIFGEDGNFSEEKLKEVVNADL 360

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  GNLVSR++ MI   +   +       +  + I         + +++M    I +  
Sbjct: 361 INNYGNLVSRTLKMIHNSFPKGLFYSVNSKKIHKDIEKEIKNFSAQFQKHMDAFEIDKGF 420

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            + I L +++++Y D   PW+L     +    +L   +  I  ++  LQ  +P    ++ 
Sbjct: 421 KKAIELSAKLNKYIDETTPWKLT-DKLEELEPILVRLLNGIYAVSCALQIVLPTKIKEVA 479

Query: 475 DILFVAD 481
            +L V  
Sbjct: 480 SVLKVKK 486


>gi|316983598|gb|EFV62580.1| methionyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 720

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G    +    D HG  +  AAQ 
Sbjct: 38  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQK 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 98  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPEL 217

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 277

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 278 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYHFIGK 337

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 338 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 397

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 398 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDV--- 454

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWEL K     
Sbjct: 455 --ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEGQD 512

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  E   + +    L  G     
Sbjct: 513 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNL--EAITWANTRDTL--GKHAIN 568

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 569 KYEHLMQR 576


>gi|134046374|ref|YP_001097859.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|187647746|sp|A4FZL1|SYM_METM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|132663999|gb|ABO35645.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 663

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 141/534 (26%), Positives = 227/534 (42%), Gaps = 46/534 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL G +V+   GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVIHVGGTDNHGVPITLTAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L++S+D F RT    H +T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  + + Y  D  V                               Y    ++  +  
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE   P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPEM--PEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
           P     +MYVWI+A   Y++ T  L +           D    H IGKDI   HA++WP 
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDLWKDYWLENTGDSKISHFIGKDITVHHAVFWPG 297

Query: 278 F-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                    +P  V S G++  + +K+S S   V+   + IE    D LRYF +      
Sbjct: 298 ILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFMINAPLN 357

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCS 395
           +D  +  D  +KR+N +L + IGN   R++    + +            + D+ ++S C 
Sbjct: 358 RDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPVVDLNQLKDEDKKLISKCE 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             L  +   ++      AL ++I L  E + YF    PW +K  + +R   V+Y     +
Sbjct: 418 DTLNRVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPWAIK--DEERLKEVMYTCSVAL 475

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +  LL +F+P+    + + +    E    +     L       K    IF +
Sbjct: 476 KYIVYLLSSFMPEKTALLLEYMN---EELDLEVRGNPL-------KKPKVIFTK 519


>gi|195426788|ref|XP_002061477.1| GK20695 [Drosophila willistoni]
 gi|194157562|gb|EDW72463.1| GK20695 [Drosophila willistoni]
          Length = 1016

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 112/549 (20%), Positives = 218/549 (39%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   +  +  +K +   G I    
Sbjct: 314 AENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTHQEQTEIVQEAFKDVHSAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    +       R    ++++ GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPKLREWVDKADNGWTHNARVITRAWLREGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P     + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHAGFEKKVFYVWFDAPFGYVSMTKRYTKDYQQWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K+++ ++P     T+ 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSLVP-EVVLTQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DR 443
           +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K +     R
Sbjct: 670 ELILLALINRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGDETQKKR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHK 501
           A+T++ ++  +   LA LL  ++P  A  +FD L       N         L  G  + K
Sbjct: 730 AATIIGLSANIACLLANLLFPYMPSTARTLFDQLNSKQTTLNASKPLATLLLPAGHKIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 PA-PLFAKL 797


>gi|254786923|ref|YP_003074352.1| methionyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237684917|gb|ACR12181.1| methionine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 678

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 125/542 (23%), Positives = 226/542 (41%), Gaps = 48/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF +L G   ++    D HG  I   A+ 
Sbjct: 10  RKILVTSALPYANGAIHLGHMVETIQTDIWVRFQKLRGNQCIYVCADDAHGTAIMLRAEQ 69

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +  +   S + +       I +D++  T  + + +    ++ ++ + G I     
Sbjct: 70  LGVTPEEQIAAVSADHQADFADFLIDFDNYHSTHSEENRELSSHIYTQLQNNGHIATRSV 129

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
           +  Y    + +  D  V             G + +  +A ++P++               
Sbjct: 130 TQAYDPEKQLFLADRYVKGTCPKCKTPDQYGDNCENCSATYSPMELLNPVSVISGATPIA 189

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + + YFF L  + D L  +  +     L  E  N++  ++ SGL++  +SR    +G +
Sbjct: 190 KDSDHYFFTLPEFSDFLKDWTRAG---HLQDEVANKLAEWLDSGLQEWDISRDAPYFGFE 246

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP  P    YVW+DA   Y+ +   L +         +W  D      H IGKDI+ FHA
Sbjct: 247 IPGHPGKYFYVWLDAPIGYMASFKNLCDKTEGLEFDDYWKKDSDCELYHFIGKDIINFHA 306

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P KV  HGF+   G K+SKS G  I+    ++ +  + LRY+   +
Sbjct: 307 LFWPAMLSDAGFRTPTKVCVHGFLTVDGTKMSKSRGTFINARTYLKHLDPEYLRYYYASK 366

Query: 333 IA-CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +     D   + +    RVN+DL   + N+ SR+   + K    +         ++ ++ 
Sbjct: 367 LTNSVDDLDLNLEDFISRVNSDLVGKVVNIASRTAKFVAKSGGTLSAVV-----AEPALW 421

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLY 449
              +   Q I  + +N+   +A+ ++++L    + Y   Q PW+L K          V  
Sbjct: 422 EKFTAAEQSIASHYENREYGKAMREIMALADAANEYIAEQAPWQLAKEAGKEQQVLEVCS 481

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + V     L   L+  +P  A K  + L    +     +          + +TF P+  R
Sbjct: 482 MGVNCFAALMTFLKPVLPATALKAEEFLNTTLDWSDSLTFMSE----HTI-QTFKPLMTR 536

Query: 510 FL 511
            L
Sbjct: 537 VL 538


>gi|281353298|gb|EFB28882.1| hypothetical protein PANDA_004122 [Ailuropoda melanoleuca]
          Length = 864

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 223/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 224 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 283

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 284 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDTFGRTTTPQQTKITQDIFQRLLTRGFV 343

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N V+  + +    R
Sbjct: 344 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 403

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 404 SCPVVKSSRHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 462

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 463 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVNLYQFMAKDNV 521

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 522 PFHGLVFPCSALGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 581

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    +  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 582 RFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTS 640

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D  +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 641 DDRRLLAHVTLELQHYHQLLEKVRIREALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 700

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P +   I   L +          +    L  G  + 
Sbjct: 701 RAGTVTGLAVNIAALLSVMLQPYMPTVGGTIQAQLQLPPPACRVLLTNFVCTLPAGHQIG 760

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 761 -TVSPLFQKL 769


>gi|195384499|ref|XP_002050955.1| GJ22433 [Drosophila virilis]
 gi|194145752|gb|EDW62148.1| GJ22433 [Drosophila virilis]
          Length = 1016

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 114/551 (20%), Positives = 221/551 (40%), Gaps = 52/551 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +  +   G I    
Sbjct: 314 AENMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFHDVYKAGYILTES 373

Query: 124 YSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEGYFFRLS--- 170
                  + + +  D  V          Y+ A G   +     V   E      ++    
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNSA 433

Query: 171 -------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                           +  L  +    E       R    ++++ GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFLDLPKAEPQLREWVDRVEQGWTHNARVITRAWLREGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P     + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHKNFEKKVFYVWFDAPFGYVSMTKRYTKEYLQWWQ--PAAGTNVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K+++  +P      + 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTVPQI-VLNQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           +  +L++ +R L+    +++   +   +  ++++    + Y   Q+PW L K N +   R
Sbjct: 670 ELVLLALINRELRGYINSLEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNDEQKSR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFML 499
           A+T++ +   +   LA LL  ++P  A  +F  L       D ++   ++   L  G  +
Sbjct: 730 AATIIGLCANIACLLANLLFPYMPSTARNLFAQLNAKQTPLDASKPLATI--LLPAGHKI 787

Query: 500 HKTFDPIFPRF 510
            K   P+F + 
Sbjct: 788 GKP-SPLFTKL 797


>gi|325954554|ref|YP_004238214.1| methionyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437172|gb|ADX67636.1| Methionyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 678

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 135/547 (24%), Positives = 245/547 (44%), Gaps = 44/547 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    +  I+ A+ Y N   HIGH A   + +D+ AR+ R  G DV F  G+DEHG  I 
Sbjct: 1   MSNTNRYTITAALPYANGPLHIGHMAGVYVPSDIFARYLRRKGKDVAFIGGSDEHGIPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+N GVT +  VD+   N ++  +   +++D + RTT  +H +  +  +K +      
Sbjct: 61  IRAKNEGVTPQDIVDKYHENIKNTLESFGVTFDVYSRTTSAKHREVAQDFFKTLYQNSKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ---------- 158
            +     +Y    + +  D  +             G   +   +  +P +          
Sbjct: 121 TEEVTEQYYDEEAKEFLADRYIRGECPKCGNPDAYGDQCEKCGSTLSPEELINPRSALSG 180

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  YQD L  +     +         +V S++  GLK  +++R   
Sbjct: 181 NTPIKRETKNWYLPLDQYQDFLKDWILLGHKEDWKSNVYGQVKSWLDDGLKPRAMTRD-L 239

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           +WGI +P D     +MYVW DA   Y++ T      +G   K +  +     +H IGKD 
Sbjct: 240 NWGIPVPIDGTEGKVMYVWFDAPIGYISFTQEWAEKNGKDWKDYWQNPETKLVHFIGKDN 299

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDA 324
           + FH I +P+         LP  V ++ F+  + +KIS S    +   E +E+     D 
Sbjct: 300 IVFHCIVFPSMLKAHGEYILPDNVPANEFLNLEDDKISTSRNWAVWAHEYLEDFPNQQDT 359

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L   +   KD  +     + + N++L   +GN ++R + +  K YDG+IPT    +
Sbjct: 360 LRFVLTSNMPENKDNNFTWKDFQTKNNSELVGILGNFINRVMVLTHKYYDGIIPTKT--S 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             DE +        + I E++++     AL + ++L    +++  AQ+PW+ K  +P+  
Sbjct: 418 SFDEVL--QIKEYAKRIGEHIEHYEFRAALHEYMNLARLGNQFLQAQEPWK-KANDPEAV 474

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKPGFMLHKTF 503
             ++Y   ++   LA L + F+P  + K+ D++ V  +N     + D+ ++ G  L +T 
Sbjct: 475 KNIMYAANQIAVALAQLAEPFLPFSSTKMLDMMKVELKNWDDLIATDEWIESGHQLGETT 534

Query: 504 DPIFPRF 510
             IF + 
Sbjct: 535 L-IFNKI 540


>gi|189346708|ref|YP_001943237.1| methionyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|226710900|sp|B3ECI3|SYM_CHLL2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189340855|gb|ACD90258.1| methionyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 702

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 135/564 (23%), Positives = 255/564 (45%), Gaps = 58/564 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+   +  ++TA+ Y N   H+GH A   + AD+  R+ R+ G DV+   G+DEHG  I 
Sbjct: 1   MQHVTRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRMKGEDVIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+  R   +      IS+D + RT+ + HHDT +  + +I  KG  
Sbjct: 61  ITAEKEGISPQDVVDRYHRMNSEAFRKCGISFDYYGRTSSQGHHDTAKEFFLEIERKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +     ++  + E + +D  V             G   +      +P + +  +     
Sbjct: 121 RRKTEKLFFDAKAERFLSDRYVTGTCPICNNPEANGDQCEQCGTHLSPTELLNPKSKLSD 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     ++F L  +Q+ L +Y  SH     P    N   +++K GL D +++R   
Sbjct: 181 ATPELRDTMHWYFPLGRFQEALEAYVASHEHDWRP-NVVNYTRTWLKQGLNDRAITRD-L 238

Query: 215 DWGIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVI 263
            WGI++P D       ++YVW DA+  Y++ T       G +   + +  D     ++ I
Sbjct: 239 SWGIQVPLDDPEACGKVLYVWFDAVLGYISFTRQWAAEAGDESLWRAYWQDPESRVVNFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   E 
Sbjct: 299 GKDNVVFHTLMFPAILMAWNEGRQSGIYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+   D LRY +       KD  +     + R N +LA+ +GN + RSV      +DG+
Sbjct: 359 LEKFPADTLRYSIAMNYPENKDTDFSWQDFQNRTNGELADTLGNFIKRSVDFTNSRFDGV 418

Query: 377 IPTPGAFTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +P     T+ D ++L +  S+ ++++ +  +   I    +  + +    +R+    +PW+
Sbjct: 419 VPFSC--TDDDWNVLGIDWSQTIEKLDQAYEQFHIRETASLGMDIARSANRFLTESEPWK 476

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-----NRCFQSLD 490
           + KT+ + A+  + +++ +   LAI L   +P+ A +I+ +L           R   +++
Sbjct: 477 VIKTDREAAAKTMALSLNLCYALAITLYPVIPETAGRIYAMLGFEGSIDARIKRGVSAIE 536

Query: 491 QRLKP----GFMLHKTFDPIFPRF 510
           + L P    G  + K  + +F + 
Sbjct: 537 ELLAPQLHKGHRIRKESEILFTKI 560


>gi|121633907|ref|YP_974152.1| methionyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|187647737|sp|A1KR57|SYM_NEIMF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120865613|emb|CAM09333.1| methionyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 685

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 222/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +            +I YD++  T    +    + +++ +     I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQFSQDIYRALKANDKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGKLKDV--- 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
             SD ++L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 420 --SDSALLAKLTAQSEAIAECYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTATNAARFLNLD----AITWTNTRVTLGKHAIN 533

Query: 502 TFDPIFPR 509
            +  +  R
Sbjct: 534 KYKHLMQR 541


>gi|268324999|emb|CBH38587.1| putitive methionyl-tRNA synthetase, partial sequence [uncultured
           archaeon]
          Length = 539

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 137/540 (25%), Positives = 238/540 (44%), Gaps = 45/540 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + +++A+ Y N + HIGH    + AD+  R  R  G DV+F +G+D HG  I  +A+ 
Sbjct: 7   KPVLVTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGHDVIFISGSDTHGTPIVLSAEA 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  V +   +F+ +   L++ +D + +T  + +H     + KK+ D G +Y    
Sbjct: 67  EGIAPEAVVARFHDHFKRIFKALNVDFDYYGQTNSECNHKRTGEIVKKLIDSGYVYMEET 126

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              +      +  D  V                                      N   +
Sbjct: 127 KQAFCDTCGRFLPDRYVEGECPYCGASARGDECDQGCGKHLEPGEIIAPKCKICGNEAVF 186

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E+E +FF LS + D L SY             RN    +VK  L+D  ++R   DWG+K
Sbjct: 187 KEQEHFFFHLSRFADFLASYL---DNLGGTRNARNYAREWVKKELRDWCITR-KLDWGVK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPAD----LHVIGKDILRFHAIY 274
            P     ++YVW+DA   Y++ T  L   D  K  ++W  D    +H IG DI+  H I+
Sbjct: 243 FPGREDLVVYVWVDAPIGYISFTEELMGGDERKWREYWKEDGATIVHFIGTDIIYHHCIF 302

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPA L  A   LP  V + G +   G   SKS G+V+   + +E    D LRY+LV + +
Sbjct: 303 WPAMLKGAGYSLPDAVVASGMVKIDGRTFSKSRGDVVWTSDFLERFHPDTLRYYLVAQSS 362

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K+  +  +    RVN +L   +GNLV R VS   K++  +        E DE++++  
Sbjct: 363 HTKELNFSWNSFFLRVNNELVGILGNLVHRVVSFAYKNFGVVP-----EGEIDEAVITKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLYVT 451
           +   +E    ++     + +  V+ L    + YF  ++PW L K      +R   ++   
Sbjct: 418 TETREEAINAVEEYEFKKLVDAVMKLADFGNGYFQREEPWHLIKKGDKERERGGEIIKNV 477

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPR 509
           +++++ + ILL+A +P+   +++  L +  +        L   +  G  L K    +F R
Sbjct: 478 LQILKAVCILLEAVMPEKMAEVWSQLGMESDLHSVKLDELTVPIASGQKLKKPKK-LFER 536


>gi|255723315|ref|XP_002546591.1| methionyl-tRNA synthetase, mitochondrial [Candida tropicalis
           MYA-3404]
 gi|240130722|gb|EER30285.1| methionyl-tRNA synthetase, mitochondrial [Candida tropicalis
           MYA-3404]
          Length = 568

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 186/521 (35%), Positives = 282/521 (54%), Gaps = 47/521 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF-TTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD  +++ +L+     F  TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRSKWEKLNPNQKSFMLTGTDEHGLKIQA 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K  VD+ S+NF  +A+  +++YD FIRTT+  H +  +  W  + +KG IY
Sbjct: 75  TAEKQGIEPKELVDKVSQNFAYLAEKSNVNYDRFIRTTDPDHIEVVKYFWNLMMEKGYIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE +Y + ++      G   +      N V + EE  YFF+LS +QD+L
Sbjct: 135 TDTHSGWYSVSDETFYPETQIEEVEKDGKMVKISIETKNEVVYQEETNYFFKLSQFQDQL 194

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           + Y ESHP+FI P  R   +++ +K   L DLS+SR      W I++P+DP   +YVW D
Sbjct: 195 IEYLESHPDFIKPYHRYQFILNELKQNKLTDLSISRPSSRLKWSIEVPNDPSQKIYVWFD 254

Query: 234 ALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           AL NY+T  GY     +   +  WPA  H+IGKDI+RFH IYWP FL++A + LPK+V  
Sbjct: 255 ALLNYITAAGYPETFNNNELSNMWPA-THIIGKDIIRFHCIYWPIFLMAAGVELPKQVIV 313

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H   L  G K+SKSLGNV+DPIE+ E  GVD +R+FLV       D  +  D L++  +A
Sbjct: 314 HSHWLCDGFKMSKSLGNVVDPIEISEYYGVDPVRFFLVENSNIEDDCKFSVDLLERSRDA 373

Query: 353 DLANGIGNLVSR---------------------SVSMILKDYDGMIPTPGAFTESDESIL 391
            L     NL+SR                     ++  I+KD D          ++ + ++
Sbjct: 374 VL-GKYCNLISRIGAKNFNIQEAVEYSTSGKFDNIEQIIKDVDNS--NGDDLIKASQELI 430

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW---ELKKTN--PDRAST 446
           +  + +   +  + +N    +A+     ++++ +  F   +PW   +L K    P+ A +
Sbjct: 431 ANLNNLYITMDTHFKNFEYIKAIQAWWGVINQGNYIFQTSEPWKYSKLLKDESIPEEAKS 490

Query: 447 --------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                   V Y+  E +R  +IL+Q  +P+L+NKI + L V
Sbjct: 491 KYLTYINYVTYLCAETMRISSILIQPVMPELSNKILNRLQV 531


>gi|281207820|gb|EFA82000.1| methionyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 596

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 178/532 (33%), Positives = 268/532 (50%), Gaps = 35/532 (6%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            I+T I Y N  PHIGH Y  ++ D +AR++R     VL+ TGTDEHGQK+  AA+ A  
Sbjct: 68  LITTPIFYVNGTPHIGHLYTSVLGDAIARWNRFCNDKVLYMTGTDEHGQKVQDAAKKAQK 127

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
              V+ D+ S  FR   D   ISYDD+IRTTE+RH +    +W K+   G IYKG Y GW
Sbjct: 128 DNIVYCDEISGVFRKSFDQFGISYDDYIRTTEQRHKNVVHDMWNKLDGNGLIYKGSYEGW 187

Query: 128 YSLRDEAYYNDDEVYKGA-----------DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           Y + DEA+  +D+V  G              +      NP +W+ E  Y F+L+ +   +
Sbjct: 188 YCVSDEAFLTNDQVQDGMSPVTPQNPVSKPCKLSIESGNPCEWVSESNYMFKLTDFLKPI 247

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
            ++   +P   L  E  N         LKDLS+SR      WGI++P+D    +YVW+DA
Sbjct: 248 DNWLSKNP---LYPESWNLQARSYLPHLKDLSVSRPSSRLPWGIRVPNDESQSIYVWLDA 304

Query: 235 LTNYLTT---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           LTNYLT               A       HVIGKDIL+FH+IYWPAFLL   L LP  + 
Sbjct: 305 LTNYLTVAGGFKARSADGTDIAWNHTDVTHVIGKDILKFHSIYWPAFLLGTGLKLPHSIV 364

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +H     +  K+SKS GNVI P ++ E+ G++ +RYFL++      DG +    ++ R+ 
Sbjct: 365 THAHWTVERVKMSKSRGNVISPFDIAEKYGIEGVRYFLLKGGGLENDGDWSDLEVRSRIT 424

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENM 405
           ADLA+  GNLV+R  +  L                 A   +   I+    +++  + ++ 
Sbjct: 425 ADLADTFGNLVTRCTAKALHPSRAWPTCLSQTFAATAQEPNSLRIIEQMQQLVSLVNQHY 484

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWEL----KKTNPD--RASTVLYVTVEVIRQLA 459
           +   I   + +VI+     + + +  KPW L     K   D  R + ++Y+ +E IR +A
Sbjct: 485 KCGDIKSGIYEVINFTYATNNFVEQTKPWTLVPKPGKQAGDLMRLNDIMYILLECIRTIA 544

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +LL   +P+ + K  D + V + +R        ++ G+   +T  P+ P  L
Sbjct: 545 LLLSPVIPESSKKTLDHIGVDETHRNINH----IQFGYDYPQTLVPMNPLIL 592


>gi|288932631|ref|YP_003436691.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894879|gb|ADC66416.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 658

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 43/530 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++  + Y N + HIGH    I ADV  R+ RL G +V+F  G+D HG  I   A+  G+
Sbjct: 3   LVTCGLPYANGKAHIGHLRTYIPADVYVRYLRLRGEEVIFVCGSDSHGTPIVVNAEQQGL 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K  VD   ++F+++   L + +D + RT    HH+  R + KK+ +KG +Y       
Sbjct: 63  KPKELVDIYHKHFQEIFKSLRVEFDFYGRTDSDYHHERTREIVKKMIEKGYVYPKEIELA 122

Query: 128 YSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQWMEE 162
           Y    E +  D  V                                       P  + ++
Sbjct: 123 YCPNCERFLPDRYVEGICPYCGAEARGDECDQGCGRHLEPGEILKPRCKICGTPAIFKKQ 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + YFF+LSA++D L  Y     +        N    +V+  LKD  ++R   +WG+K P 
Sbjct: 183 KHYFFKLSAFKDFLEDYL---EKLKGTENALNYAKEWVRKELKDWCITR-NLEWGVKFPG 238

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----AD-LHVIGKDILRFHAIYWPA 277
           +   ++YVW+DA   Y++ T       G   +       AD +H IG DI+  H I+WPA
Sbjct: 239 EEDLVVYVWVDAPIGYISFTEKACEKLGKDWREIWIEGKADIIHFIGLDIVYHHCIFWPA 298

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREIAC 335
            L +A+  LP  V + G +  +G+  SKS G V+   E  + E    D LRY++V   + 
Sbjct: 299 MLKAADYALPSAVVASGMVKVEGKTFSKSRGYVVWVDEDYLNEGFDPDCLRYYVVNYTSH 358

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  +  K++VN +L   +GN + R +    +++  +          D  ++    
Sbjct: 359 QKDLNFSWEVYKEKVNNELIATLGNFIYRVLHFAWRNFGEVKMN------VDGEVIEQIR 412

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + +I E ++      A    + L S  + YF   +PWEL K +P+ A   +   + ++
Sbjct: 413 LAMNKIDEAIEKWEFKEASDAFMELASYGNVYFQNAQPWELIKNDPESAERAVASCLALV 472

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           R L IL    +P    KI  ++ +       +    ++     + K F P
Sbjct: 473 RALTILAYPVLPSTMEKIGKLIGLDVSKAKLEDA-LKIPDKIKVEKPFVP 521


>gi|328718436|ref|XP_001949836.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 527

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 174/527 (33%), Positives = 278/527 (52%), Gaps = 28/527 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL--DVLFTTGTDEHGQKI 58
           + ++   +I+T I Y NA PHIGH Y  +IAD  ARF +L     +++F+TGTDEHG K+
Sbjct: 11  VTKKTSYFITTPIFYVNASPHIGHLYSALIADASARFQKLLNPSLNIIFSTGTDEHGLKV 70

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            KAA+N  ++ K +  + S +++   D  DIS+  FIRTT + H +     W K+     
Sbjct: 71  QKAAENCKISVKNYCTKISSSYQTTFDKFDISHTSFIRTTAENHKNCVHYFWSKLQPH-- 128

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           I KG YSGWY   DE + + D++    + +        V+W EE+ Y F L  ++   L 
Sbjct: 129 IRKGKYSGWYCTADETFLSQDQIELVNNVRVSKESGRQVEWAEEDNYKFDLRPFK-HDLQ 187

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALT 236
            + S P+ I P     E+++   + L D+SLSR      WGI +P D    +YVW+DAL 
Sbjct: 188 CWLSKPDRIKPKVFH-EILNREVNDLYDISLSRPKSRVSWGIPVPRDDTQTVYVWLDALV 246

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT +GY        +K WP ++ V GKDIL+FH I WP FL++A L LPK++F H   
Sbjct: 247 NYLTVSGYP------DSKIWPPNVQVCGKDILKFHGILWPIFLIAAGLELPKQIFVHSHW 300

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
               EK+SK+ GNV+DPI    +     LRYFL+RE     DG Y    +K+ +NA+LA+
Sbjct: 301 KVNDEKMSKTKGNVVDPINAGCQYTESGLRYFLLREGTAHSDGNYSDLKIKRILNAELAD 360

Query: 357 GIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILS---VCSRVLQEIRENMQNQLI 410
            +GNL++R     +     Y  +         +D   +        +   +  + +    
Sbjct: 361 TLGNLLNRCCGKAINPNLSYPKLDLLQIERLLADSYFIELSKKLEVLADIVGSHYEELNF 420

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++ + ++I+ +   +R+F+  KPWEL K + ++   +L++T+E +R   + LQ  VP LA
Sbjct: 421 YKGIDEIIATLQCCNRFFEYNKPWELAKQDVNKLKCILHITMETLRISGLALQPIVPVLA 480

Query: 471 NKIFDILFVADENRCFQSL------DQRLKPGFMLHKTFDPIFPRFL 511
           +++ + L +   NR +  +      + R+     L K    +F + L
Sbjct: 481 DQLLNKLNIN--NRDWNQMTPTWKDENRIVNPTNLKKDNIVLFKKLL 525


>gi|257457531|ref|ZP_05622698.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444917|gb|EEV19993.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 791

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 117/534 (21%), Positives = 227/534 (42%), Gaps = 43/534 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  I++A+ Y N  PH+G+  +++ ADV ARF RL G   L+  GTDE+G      A  
Sbjct: 2   KRKLITSALPYVNNIPHLGNLIQVLSADVFARFCRLRGYTSLYVCGTDEYGTATETKALE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D      RD+    +IS+D F RT+  +  +  + ++K I   G I +   
Sbjct: 62  EGKTPRELCDYYHAIHRDIYHWFNISFDYFGRTSTPQQTEIVQGIFKDIEKNGFIKEHTI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFF--------- 167
              Y      +  D  V             G    A    ++  E +             
Sbjct: 122 EQLYCAHCNRFLADRYVRGTCPHCGYEDARGDQCEACGKLLEPTELKAPRCSTCGAAPEP 181

Query: 168 RLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKDLSLSR---KTFDWGIK 219
           R + +    L       E  +       +  N  +   K  L+D    R   +   WGI 
Sbjct: 182 RSTKHLYIDLPGIVPQYEPWMQKASKEGQWSNNAVQMTKGWLRDGLQERAITRDLKWGIP 241

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
           +P       + YVW DA   Y++ T    +  G+  K W  +         IGKD + FH
Sbjct: 242 VPKAGFEDKVFYVWFDAPIGYISITKCFTDLTGTDWKNWWLEQSDVELFQFIGKDNIPFH 301

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
            + +P  L+++     K   + S  ++ ++  K SKS G  +   +  +  +  D  R++
Sbjct: 302 TVIFPCSLIASGKDWVKLHHISSSEYLNYESGKFSKSKGIGVFGSDAKDSGIPADMWRFY 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           +        D  +     ++RVN++L   + NL++R+++ + + Y+G+IP   G  +  D
Sbjct: 362 IFYNRPEKNDALFTWKDFQERVNSELVGNLCNLINRTLTFVSRYYNGVIPQRDGPASSRD 421

Query: 388 ------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                 ES+ +     +++I   ++   +  A  ++ +L S  ++ F   +PW+ ++ +P
Sbjct: 422 DVRFVTESLRAAAKYSIEKITALLEEAELRDAFHELFALSSVANKAFQDGEPWKNREADP 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           ++A  +L+    +I+ L IL+  ++P+ A+ +   L +   +      +  ++P
Sbjct: 482 EKAEALLFELCYLIKDLLILMHPYMPEYADAVASFLGIKIWSGNVFDWEHPIQP 535


>gi|297620945|ref|YP_003709082.1| Methionyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376246|gb|ADI38076.1| Methionyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 674

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 132/550 (24%), Positives = 237/550 (43%), Gaps = 48/550 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R+K+ I++A+ Y N   H GH A   +  D  ARF RL G D L+  G+DE+G  I  +
Sbjct: 2   SRQKVLITSALPYANGPLHFGHIAGAYLPGDCYARFQRLIGSDTLYICGSDEYGVAITLS 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG T K  VD      + +   L++S+D + RTT + H       +K + + G I +
Sbjct: 62  AEIAGRTPKEHVDLYHEVIKGLFQKLNLSFDHYSRTTWEGHEKPVHQYFKDLLENGYIEE 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-------------------------QHNP 156
                 YS +D+ +  D  V     G  ++                           + P
Sbjct: 122 KVTDQLYSEQDKRFLADRYVVGVCPGCGFDCARGDECPQCGASYEATDLKNPRSKLTNAP 181

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +     + +F +L  ++++L  +  S       +      I      L+  +++R + +W
Sbjct: 182 LTRKATKHWFLKLDRFKERLTEWLNSKEWKPNVVNFVKGYIK----NLRPRAITRDS-EW 236

Query: 217 GIKIP--DDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
           G+ +P  +    ++YVW DA   YL+ T        D  + K +  D     ++ IGKD 
Sbjct: 237 GVPVPLSNTEGKVLYVWFDAPIGYLSATMEWALKKGDPEQWKAYWCDESTTLVNFIGKDN 296

Query: 268 LRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + FHA  +PA  +  N P      + ++ F L +G + SKS G  ID  +  E    D +
Sbjct: 297 IPFHAAIFPAMTMGQNQPYKLVDHLPANEFYLLEGRQFSKSEGWYIDLDQFFERYTADQI 356

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY +        D  +     + + N DL    GNL +R +    K+  G +P      E
Sbjct: 357 RYAIAANAPETSDSEFTWKDFQYKCNGDLLGKYGNLANRIMVFSHKNVHGKVPARKNLDE 416

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-- 443
            D++ LS    ++ +  +  Q+  + +A   ++ L    + YFD ++PW+L K    R  
Sbjct: 417 VDKAFLSSIDVLVDQAFQCYQSFSLRKACQVIMELAQRGNIYFDGKQPWKLAKDPEQREV 476

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLH 500
             TVL   +E ++ LA++    +P+ A+K++ +L       +    ++    +  G  L 
Sbjct: 477 LETVLSCCLECLKALALISSPILPETADKLWTMLGFEGRLSDTGWQKAAAMEIPVGQKLG 536

Query: 501 KTFDPIFPRF 510
           +    +F + 
Sbjct: 537 QP-QILFKKI 545


>gi|118602577|ref|YP_903792.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|187647764|sp|A1AWL4|SYM_RUTMC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118567516|gb|ABL02321.1| methionyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 550

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 126/542 (23%), Positives = 238/542 (43%), Gaps = 44/542 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K+ +++A+ Y N + H+GH  E I AD+  RF ++ G +  +    D HG  I  
Sbjct: 1   MTSR-KILVTSALPYANGEIHLGHLLEYIQADIWVRFQKMMGNECYYVCADDTHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +   G+T +  +   S   +       I +  +  T  + + D    ++ K++D G I 
Sbjct: 60  KSDELGITPETLIKGVSERHQADFKEFSIGFSKYHSTHSQENKDISANIYHKLNDAGFIK 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
               S  +    + +  D  +             G + +     ++P +           
Sbjct: 120 TRIISQAFDPEKQMFLPDRFIKGDCPKCGANDQYGDNCEICGVTYSPTELKNAKSIISDA 179

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E YFF L  ++ +L ++ +      L  E  N++  + + GL+   +SR    
Sbjct: 180 TPIAKDSEHYFFDLPQFETQLKAWIKEG---HLQDEVSNKLSEWFEQGLQQWDISRDAPY 236

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IPD      YVW+DA   Y+ +     D       +++  D      H IGKDI+ 
Sbjct: 237 FGFQIPDVEGKYFYVWLDAPIGYMASFKKLCDEQGLDFDEYFNKDSNTELYHFIGKDIVY 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L+ +N   P  +F HGF+   G+K+SKS G  I     +  +  + LRY+ 
Sbjct: 297 FHALFWPAILMGSNYRTPSAIFVHGFLTVNGQKMSKSRGTFIQARTYLNHLNPECLRYYY 356

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   +    K+RVN+DL   + N+ SRS   ++K ++  +         D 
Sbjct: 357 AYKLSAKIDDIDLNLTDFKQRVNSDLVGKVVNIASRSTGFLVKKFNKTLSDYA----IDP 412

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +          I+++ + +  ++A+ +++ L  + ++Y D  KPW+L K +  +   V 
Sbjct: 413 ELYHEFVACGDIIKKHYEARNYNQAMREIMKLADKANQYIDEHKPWQLVKKDTKQVHDVT 472

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + + + R L   L+  +P +A +    L +   N  +Q L + L     ++ TF P+  
Sbjct: 473 SLAINLFRVLMTYLKPVLPVMAKQAEMFLNIDAFN--WQDLKRPLT-KHQIN-TFKPLMS 528

Query: 509 RF 510
           R 
Sbjct: 529 RI 530


>gi|297620242|ref|YP_003708347.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379219|gb|ADI37374.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 703

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 140/556 (25%), Positives = 244/556 (43%), Gaps = 63/556 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+++    ++TA+AY N   H+GHA    I ADV  RF +L G +V    GTD HG  I 
Sbjct: 1   MQKKAN-LLTTALAYTNGPLHLGHARSTYIPADVYRRFLKLKGEEVYHVGGTDNHGVPIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  GV     V++     +   D L++ +D+F +T    H +T +  ++++   G I
Sbjct: 60  LTAEKEGVKPIDIVERYHNAIKADLDTLNVEFDNFGQTHSDVHIETSQEFYRELRKAGYI 119

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEE------- 162
           Y+     +Y  + + Y  D  V           +G   +       P +  E        
Sbjct: 120 YEKEIEQFYCPKCDKYLADRYVEGLCPFCGGEARGDHCEVCGRHLEPTELKEPYCVHCNT 179

Query: 163 -------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    YFF+LSA + +L+ Y  S  +   P   +N  +++V   L D  +SR    
Sbjct: 180 TPELKKSTHYFFKLSALKGELIEYLNSAEKM--PEHVKNLALNWVNE-LHDWDVSR-NLK 235

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------------- 259
           WG+ IPD    +MYVW++A   Y++ +  L +      K    +                
Sbjct: 236 WGVPIPDCDDQVMYVWLEAPIGYISFSKALGDKWEILWKENKENKENKKTNNNNENNNEI 295

Query: 260 LHVIGKDILRFHAIYWPAF----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           +H IGKDI   HA++WP             +P  V S G++  +G+K+S S   V+   +
Sbjct: 296 IHFIGKDITVHHAVFWPGMLEGVNKVNGYKMPTAVVSGGYLTLEGKKMSTSKNWVVWVAD 355

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            ++    D LRYFL+      +D  +  D  +KRVN +L + IGN   RS+    + ++ 
Sbjct: 356 FVKNFNTDYLRYFLLANAPLYRDTDFSWDEFQKRVNTELIDNIGNFTHRSLVFANRKFEK 415

Query: 376 MI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +         + D+++LS     + ++ E ++      AL ++I L  E + YF + +PW
Sbjct: 416 VPLVDENQLLDVDKALLSKSEETVLKVDELIREFNFKDALMEIILLGKEGNGYFQSNEPW 475

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            +   + +R   V+Y   +V++ L  LL  F+P+  + +   L + +E    +     L 
Sbjct: 476 AI--EDEERLKQVIYTCCKVVKSLTYLLSPFMPEKTSAL---LGLMNEENDLKLRGNEL- 529

Query: 495 PGFMLHKTFDPIFPRF 510
                 K    +FP+ 
Sbjct: 530 ------KKPKILFPKI 539


>gi|258544167|ref|ZP_05704401.1| methionine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520609|gb|EEV89468.1| methionine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 675

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 218/541 (40%), Gaps = 45/541 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ ++ +++A+ Y N   H+GH  E I  D+  RF RL G +  +    D HG  I   +
Sbjct: 5   KKRRILVTSALPYANGAIHLGHMVEYIQTDIWVRFQRLRGHECHYVCADDAHGTPIMLRS 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  +D++            I +  +  T    +      +++ + + G I + 
Sbjct: 65  EKEGITPQQLIDKSHSEHLRDFRGFLIDHHQYHSTHSAENRALTAAIYRALDNGGHILRR 124

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW------------ 159
             S  +    + +  D  V             G + +     + P               
Sbjct: 125 TISQLFDPEKQLFLPDRFVKGECPKCHSKDQYGDNCEVCGTTYAPTDLINPYSALSGATP 184

Query: 160 --MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E YFF L A+   L  + +S     L    RN++  +   GL+   +SR    WG
Sbjct: 185 VERDSEHYFFDLPAFDAFLRDWLQSA---QLQESMRNKLGEWFVEGLQPWDISRDAPYWG 241

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
            +IPD P    YVW+DA   Y+     L + +      +  +       H IGKDI  FH
Sbjct: 242 FEIPDAPGKYFYVWLDAPIGYMGAFRALCDRENLDFDAFWREGHDTELYHFIGKDIAYFH 301

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WPA L  A    P  V  HGF+   GEK+SKS G  I     ++ +  + LRY+   
Sbjct: 302 MLFWPAMLKGAGYRQPSGVNCHGFLTVNGEKMSKSRGTFIKAETYLKHLRPEYLRYYFAS 361

Query: 332 EIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D   + D  +++VN+DL   + NL SR    I K +DG +             
Sbjct: 362 KLSARVEDLDLNLDDFRQKVNSDLVGKLVNLASRCAPFISKHFDGALAAALPDDALFNQF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VL 448
            +    +        + +    A+  ++ L    + Y DA+KPW   K +  RA+   + 
Sbjct: 422 AAKADDL----ASAYEQREYSSAIRDIMKLADAANEYIDAEKPWVKIKDDASRAAVQGIA 477

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            V +   RQL   L+  +P++A     +L +      +      L  G  + + F  +  
Sbjct: 478 TVGINAFRQLITYLKPVLPQVAEDAEALLNITP--LTWADAQTPLL-GTTI-QPFSAMMQ 533

Query: 509 R 509
           R
Sbjct: 534 R 534


>gi|268600117|ref|ZP_06134284.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584248|gb|EEZ48924.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 684

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 224/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGGETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|156082730|ref|XP_001608849.1| methionyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796099|gb|EDO05281.1| methionyl-tRNA synthetase, putative [Babesia bovis]
          Length = 534

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 191/509 (37%), Positives = 291/509 (57%), Gaps = 13/509 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+TA++Y N  PHIGH YE++ +D+++RF ++ G+  +  +GTDEHG K+A  A++
Sbjct: 27  KKYYITTALSYTNGPPHIGHTYEIVTSDIISRFFKVFGMVPILLSGTDEHGLKVATTAES 86

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+      D  S  F D    L  +   F+RTTE RH+ + + +W+ + D+GDIY G Y
Sbjct: 87  YGMFPIELADYYSAKFHDNNTDLLTATHIFVRTTEPRHYKSAQKIWRILRDRGDIYLGEY 146

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SGWY++R+E +    EV   A          P   M+E  YFFR+S YQD L+    S P
Sbjct: 147 SGWYNVREETFLT--EVEAAATDYKDPLSGKPYTLMKESSYFFRMSKYQDMLIEKLSSDP 204

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++ P   R E++S +K  L+DLS+SR  F WGI +PDDP ++MYVW DALT YL+  G+
Sbjct: 205 AYLQPDSARAEILSRLKKPLEDLSVSRCNFKWGIPVPDDPSHVMYVWSDALTGYLSGIGF 264

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKI 303
            D  D S+ K WP DL VIGKDI+ F A+ W + L+S  +PLPK +F+HGFI    G K+
Sbjct: 265 GDFDDISQLKLWPPDLQVIGKDIIWFFAVIWTSILMSLEVPLPKTIFAHGFITAADGRKM 324

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV++  E++++ GVD LRY+++R+   G D  +D   L    N+DL + IGNL+ 
Sbjct: 325 SKSLGNVVNTKELLDKYGVDTLRYYMIRDSVFGSDVKFDLSSLADLHNSDLTDTIGNLLH 384

Query: 364 RSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R  ++ +K  +G IP   + +      ++ V  R L     ++Q   +  AL  VI    
Sbjct: 385 RITTLCVKFSNGCIPPLASKSAPRPFCMVDVARRTL----SHLQRFALQDALVTVIEAYR 440

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD- 481
           + ++Y   ++PW  K +   R  T+  V +E I  L  L++  +P  ++ +F  L     
Sbjct: 441 DTNKYLTDREPWA-KGSVDTRLDTIRNV-LEAIYFLNHLMEPVIPLASSVVFKKLGTEKR 498

Query: 482 ENRCFQSLD-QRLKPGFMLHKTFDPIFPR 509
           ++  F S D   L  G  +    D +F +
Sbjct: 499 DHIGFLSSDYDNLTEGTKVV-VGDILFQK 526


>gi|148653506|ref|YP_001280599.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|187647756|sp|A5WG58|SYM_PSYWF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148572590|gb|ABQ94649.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 697

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 132/555 (23%), Positives = 229/555 (41%), Gaps = 59/555 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  R  +     V +    D HG  I   A+ 
Sbjct: 2   RQILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAQSHQVTYVCADDAHGTAIMLKAEA 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +  +     +         I +D++  T  + + +   +++++++ +G I     
Sbjct: 62  NGVTPEQQIATVKASHEADFSKFLIGFDNYHSTHSEENRELSELIYRRLNGEGHISTKDV 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              +      +  D  V             G + +     +N  +               
Sbjct: 122 EQLFDPEKGLFLADRFVKGECPECGAQDQYGDNCEVCGTTYNATELKNPYSTLSGATPVL 181

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              + YFF L  ++  L     +  E  L     N++  + ++GL    +SR    +G K
Sbjct: 182 RTSKHYFFNLPEFESFLKQ--WTKDEGRLQPSVSNKLQEWFEAGLASWDISRDAPYFGFK 239

Query: 220 IPDD----PQYIMYVWIDALTNYLTTTGYLDNPDG----------SKAKFW-------PA 258
           IPD     P    YVW+DA   Y+ +   L               S   +W         
Sbjct: 240 IPDTPEGEPDKYFYVWLDAPVGYMASFKNLCKQRQGSTDPQQPELSFDDYWLQENQHKTE 299

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FHA++WPA L  +    P  VF+HGF++  G+K+SKS G  I      +
Sbjct: 300 LYHFIGKDIVYFHALFWPAMLAGSEYRTPTGVFAHGFLMVNGDKMSKSRGTFIQAETFAK 359

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+   +++   +D   D     ++VN+D+   + N+ SRS   I K YDGM+
Sbjct: 360 HLNPEYLRYYFASKLSEKVEDINLDFADFMQKVNSDMVGKVVNIASRSAGFIAKKYDGML 419

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A  E    +L+   R  +EI    +N+   RA+  ++    + + Y D++KPW + 
Sbjct: 420 SDSCAEPE----LLNEIVRAGEEIATAYENREFSRAMRLIMQCADKANEYIDSKKPWAMA 475

Query: 438 KTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K          V  V + + RQL + L   +P+L +     L + D    F S  + L  
Sbjct: 476 KEEGREQEVQDVCTVAINIFRQLMVYLAPVLPELTDNAKAFLNIDD--LSFASRHELLL- 532

Query: 496 GFMLHKTFDPIFPRF 510
           G  ++K F P+  R 
Sbjct: 533 GHKINK-FKPLMQRI 546


>gi|195029951|ref|XP_001987835.1| GH19733 [Drosophila grimshawi]
 gi|193903835|gb|EDW02702.1| GH19733 [Drosophila grimshawi]
          Length = 1023

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 225/550 (40%), Gaps = 50/550 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIFARYSRAAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K + + G I    
Sbjct: 314 AENMTPREICDKYFELHNSIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVYNAGYILTES 373

Query: 124 YSGWYSLRDEAYYNDDEV----------YKGADGQYYNAQHNPVQWMEEEGYFFRLS--- 170
                  + + +  D  V          Y+ A G   +     V   E      ++    
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELVRPRCKVCNTA 433

Query: 171 -------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                           +  L  +    E       R    ++++ GLK   ++R    WG
Sbjct: 434 PVLRSSEQLFLDLPKAEPQLREWVDRVENGWTHNARVITRAWLREGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKDIL 268
           I +P     + + YVW DA   Y++             ++W  D          + KD +
Sbjct: 493 IPVPHKNFEKKVFYVWFDAPFGYVSM---TKRYTKDYEQWWRPDANTDVQLFQFMAKDNV 549

Query: 269 RFHAIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ WP+ LL+ N    L   + +  ++ ++  K SKS G  +   +  E  +  D  
Sbjct: 550 PFHSVVWPSVLLAVNKGNTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVW 609

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L      G+D  +  + L  R N++L N +GN V+R++    K++   +P      +
Sbjct: 610 RFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVPHV-VLAQ 668

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-- 443
            +  +L++ +R L+    +M+   +   +  ++++    + Y   Q+PW L K N D+  
Sbjct: 669 DEVVLLALINRELRGYINSMEKAKLRDGIRHLLAISRHGNGYMQTQQPWVLLKGNADQKT 728

Query: 444 -ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSLDQRLKP-GFMLH 500
            A+T++ + + +   LA LL  ++P  A ++F  L       +  + L   L P G  + 
Sbjct: 729 HAATIIGLCINIACLLANLLFPYMPSTARQLFAQLNAKQTPLKADKPLTTLLLPAGHKIG 788

Query: 501 KTFDPIFPRF 510
           K   P+F + 
Sbjct: 789 KP-SPLFSKL 797


>gi|41056059|ref|NP_956370.1| methionyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|37682147|gb|AAQ98000.1| methionine-tRNA synthetase [Danio rerio]
          Length = 922

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/552 (21%), Positives = 230/552 (41%), Gaps = 47/552 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G ++L+  GTDE+G     
Sbjct: 259 EGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATEN 318

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+       +     I +D F RTT +   +  + ++ ++ ++G + 
Sbjct: 319 KAREEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLL 378

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +           + +  D  V            +G          N V+    +      
Sbjct: 379 EDTVEQLRCEGCQRFLADRFVEGECPHCRFPEARGDQCDKCGRLINAVELKNPQCKVCKE 438

Query: 165 -YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTF 214
               R S +    L   E   E  L                  S+++ GLK   ++R   
Sbjct: 439 TPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD-L 497

Query: 215 DWGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P     + + YVW DA   YL+ T    +      K  P  +   + + KD + 
Sbjct: 498 KWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWERWWKN-PQQVELYNFMAKDNVP 556

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 557 FHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWR 616

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+     G+D  +    +  + N++L N +GN ++R+   + K +DG +P      + 
Sbjct: 617 FYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFDGCVP-EMLLNDD 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D+ +++     L++  + +    I  AL  ++++    ++Y    +PW+  K   +   R
Sbjct: 676 DKRLIAQVCWELKQYIQLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAEDRCR 735

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR----LKPGFM 498
           A TV  V+V V   LA +L+ F+P ++  I   L   +  +R   S        L  G  
Sbjct: 736 AGTVTGVSVNVACLLAAVLEPFMPTVSLSIRSQLQAPESSSRAMLSGPGAFICTLPAGHR 795

Query: 499 LHKTFDPIFPRF 510
           +  T  P+F + 
Sbjct: 796 IG-TVSPLFQKL 806


>gi|313667363|ref|YP_004047647.1| methionyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313004825|emb|CBN86249.1| methionyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 684

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 125/548 (22%), Positives = 221/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L   +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRSHECHYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +             I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKAGGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGVKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFGEYFKADSQAEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +   + I E  +++   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLTAQSEAIAECYESREYARALRDIMALADAVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R+  G     
Sbjct: 478 ERLHEVCSELINAFTILTAYLAPVLPQTAANAARFLNLD----AITWANTRVTLGEHTIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|195487299|ref|XP_002091851.1| GE13875 [Drosophila yakuba]
 gi|194177952|gb|EDW91563.1| GE13875 [Drosophila yakuba]
          Length = 1021

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 116/549 (21%), Positives = 218/549 (39%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    +++K GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P +   + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K+++  IP     T+ 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFNSTIP-EVITTQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDR 443
           +  +L++ +R L+    +M+   +   +  ++++    + Y  +Q+PW L K       R
Sbjct: 670 ELVLLALINRELRGYINSMEKAKLRDGIRHLLAISRHGNGYMQSQQPWVLLKGTDDQKKR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
           AST++ + V +   LA LL  ++P  A  +F  L         +   +   L  G  + K
Sbjct: 730 ASTIIGLCVNIACLLANLLFPYMPSTARTLFGQLNAKQTPLNAEKPLVTLLLPSGHKIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 PA-PLFAKL 797


>gi|164663379|ref|XP_001732811.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
 gi|159106714|gb|EDP45597.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
          Length = 532

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 181/536 (33%), Positives = 272/536 (50%), Gaps = 37/536 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARF--HRLDGLDVL------------FTTG 50
           +  Y++T I Y NA+PHIGH +  ++ADVL R+   R  G                 TTG
Sbjct: 3   KPFYVTTPIFYVNAEPHIGHLHSSVMADVLRRYAELRYRGWSTYGTIPNDETTRALMTTG 62

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
           TDEHG KI + A+  GV  +   D+ S+ F  +A   DI    FIRTTE  H    + +W
Sbjct: 63  TDEHGLKIQRVAETMGVEPRALCDRVSQRFEALARAADIEPTRFIRTTEDTHIAAVQHVW 122

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG--------QYYNAQHNPVQWMEE 162
            K++  G IY G + GWY++ DEA+Y + ++                       V+W  E
Sbjct: 123 NKLACHGHIYLGEHQGWYAVSDEAFYPESQICATKQQSGSSSETVYTSIETGQRVEWTTE 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKI 220
             Y FRLSA+Q  LL + E++ E I P    + V++ V+SGL+DLS+SR      WGI +
Sbjct: 183 TNYKFRLSAFQQPLLDWLENNREVIQPSNMYDHVLAEVRSGLQDLSISRLRSRLTWGIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
           P DPQ+ MYVW+DAL NY+T  GY     G     WPAD+H++GKDI+RFHAIYWPAFL+
Sbjct: 243 PGDPQHTMYVWMDALVNYMTALGYPHMQPG-----WPADVHIVGKDIVRFHAIYWPAFLM 297

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDG 339
           +A LPLP+ + +H        K+SKS GN I+P   +   GVD +RY+L+R     G D 
Sbjct: 298 AAGLPLPRTIVAHSHWTVNKAKMSKSKGNAINPFHALHTYGVDTMRYYLMRIGGHIGTDA 357

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVS----MILKDYDGMIPTPGAFTESDESILSVCS 395
            Y    L++     L   +GNL+SR ++      L     ++  P  + E+++ ++  C+
Sbjct: 358 DYAPALLEEHKRKFLQGQLGNLLSRVLAPKIQARLTGTGLLLARPTHWAEAEKRLIHACT 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +      +MQ     +A+  V  +++  +       PW    T  D     ++ + E +
Sbjct: 418 HLPPTFDAHMQAYEPSKAIQAVFDVIALTNELVQHSAPWST-DTPLDAVHRCVFASCEAL 476

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML--HKTFDPIFPR 509
           R   +LLQ  +P+    + + L V    R + SL        M    +   P+FP+
Sbjct: 477 RLCGVLLQPVMPRAMTTLLNELQVPASQRTWDSLYAWQSHIRMRDTAEKIAPLFPK 532


>gi|209522384|ref|ZP_03270997.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209497181|gb|EDZ97423.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 711

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 132/519 (25%), Positives = 216/519 (41%), Gaps = 45/519 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R ++ +++A+ Y N Q HIGH  E I  D+  R  R+ G +V +    D HG  +   
Sbjct: 14  SSRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRALRMHGHEVYYVGADDTHGTPVMLR 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G+T K  +D+     +   D   IS+D++  T    +      ++  + + G I  
Sbjct: 74  AEQEGLTPKQLIDRVWLEHKRDFDNFGISFDNYYSTDSDENRVLSENVYLALKEAGLIDA 133

Query: 122 GCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------- 162
                 Y    E +  D  +             G   +   + + P + +          
Sbjct: 134 REIEQAYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELVNPYSVVSGAT 193

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRK 212
                   YFFRLS    +  ++  +    +   E  N++  +     ++ L D  +SR 
Sbjct: 194 PIRKTSTHYFFRLSD--PRCENFLRAWVGGLAQPEATNKMREWLGDAGEAKLADWDISRD 251

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKD 266
              +G +IP  P    YVW+DA   Y  +   L    G     W          H IGKD
Sbjct: 252 APYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLAEKRGLDFDAWVRKGSTAEQYHFIGKD 311

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           IL FH ++WPA L  +    P  VF+HGF+   G K+SKS G  I    VI+  +  + L
Sbjct: 312 ILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSVIDTGLNPEWL 371

Query: 326 RYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +  +  +D   + D  + RVN+DL     N+ SR+   ++K +DG +      +
Sbjct: 372 RYYFAAKLNSTMEDLDLNLDDFQARVNSDLIGKYVNIASRAAGFLIKRFDGRVQD----S 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
                +L      L +I  + + +   RAL Q + L   V+ Y D  KPW+  K   N  
Sbjct: 428 AMHHPLLGTLRSALPQIAAHYEAREYSRALRQTMELADAVNAYVDTAKPWDQAKDPANSV 487

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V+VE  R L++ L+  +PKLA  +   L +  
Sbjct: 488 ALHETCSVSVEAFRLLSLALKPVLPKLAEAVEAFLAIEP 526


>gi|240126602|ref|ZP_04739488.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268685183|ref|ZP_06152045.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268625467|gb|EEZ57867.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 684

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 220/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 533

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 534 KYEHLMQRM 542


>gi|327401646|ref|YP_004342485.1| methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317154|gb|AEA47770.1| Methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 665

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 131/529 (24%), Positives = 219/529 (41%), Gaps = 42/529 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++  + Y N + HIGH    + ADV  R+ ++ G DV+F  G+D HG  I   A+  G+
Sbjct: 7   LVTCGLPYANGKAHIGHLRTYVPADVYVRYLKMLGEDVIFICGSDCHGTPIVVNAEKEGI 66

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  VD+   +F+ +   +DI +D F RT  + HH   +   KK+ + G I+       
Sbjct: 67  SPRELVDRYHDHFQKVFKAIDIEFDFFGRTDSEYHHIRTQEFVKKLIENGYIFPKEIELA 126

Query: 128 YSLRDEAYYNDDEVYKGA-----------DGQYYNAQHNPVQWMEE-------------- 162
           Y  + + +  D  V                 Q       P +  E               
Sbjct: 127 YCPKCQRFLPDRYVEGICPYCGSVARGDECDQGCGRHLEPGEIKEPKCKICGSNAVFRKQ 186

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + YFFRL+A++D LL Y              N    +VK  LKD  ++R   +WG+K   
Sbjct: 187 KHYFFRLTAFKDFLLDYL---ENLRGTENALNYAKQWVKGELKDWCITR-NLEWGVK-FP 241

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAF 278
               ++YVW+DA   Y++ T             W       +H IG DI+  H I+WPA 
Sbjct: 242 GEDLVVYVWVDAPIGYISFTEKACEGRCDWKDIWINGKAEIIHFIGLDIVYHHCIFWPAM 301

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREIACG 336
           L  A   LP  V + G +  +G+  SKS G V+   +  +      D LRY++V   +  
Sbjct: 302 LKGAGYALPNAVVASGMVKVEGKTFSKSRGYVVWVEDDYLKAGFNTDYLRYYIVNYTSHQ 361

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +  +  + +VN +L   +GN + R +    K++  +       +E DE I+   + 
Sbjct: 362 RDLNFSWEVFRDKVNNELIATLGNFLYRVMHFAWKNFGSV-----EVSEVDEEIMQKIAE 416

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
              +I   ++      A    + L    + YF   KPWEL K N +    V+   +++ +
Sbjct: 417 TKDKIVRALEEWEFKVASDAFMELAGFGNVYFQNVKPWELIKENKEECIKVIANCLQLAK 476

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            L I     +P+   K+   + +   N   +     L     L K   P
Sbjct: 477 ALIIFSYPVMPRTMEKMGRCIGLDVRNAKLEDALSLL-GKTELEKPDVP 524


>gi|196228014|ref|ZP_03126881.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227417|gb|EDY21920.1| methionyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 545

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 185/543 (34%), Positives = 286/543 (52%), Gaps = 42/543 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  +I+TAI Y N  PHIGHAYE ++ADVLARFHRL G DV F TG D+HGQK+ ++A+ 
Sbjct: 3   ETFFITTAIDYTNGAPHIGHAYEKVLADVLARFHRLKGEDVFFLTGVDQHGQKVQQSAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS-------DKG 117
             V  + FVD  +  F  +   L++ YD +  TT+ +H    R + +++           
Sbjct: 63  QSVEPQQFVDGITAKFLALWKKLEVEYDGWAATTDPKHKQCVRAILQRLWDDKGEDGQSK 122

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +YK    G+YS+R E +  D E  +G DG++   +   V++ EEE ++FRL  ++  LL
Sbjct: 123 WLYKKSAGGYYSVRQEQFLTDKE--RGPDGEF-GPEWGQVEFREEENFYFRLLPHKQWLL 179

Query: 178 SYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIP--DDPQYIMY 229
              +    +    ++P  R  E+ + V+    DL +SR      WGI  P      ++ +
Sbjct: 180 DLIDARSKAGQPLVVPDFRVAELRNAVEKLEGDLCISRPDTRLKWGIPFPESFGAGFVTF 239

Query: 230 VWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRF-HAIYWPAF---LLS 281
           VW DAL NY++     D     P     ++W   +HVIGKDIL   H +YWP     +  
Sbjct: 240 VWFDALVNYISFAPDYDPTAARPSEKFLQYWRNIVHVIGKDILIPAHGVYWPIMLKAIGF 299

Query: 282 ANLPLPKKVFSHGFILHKGE-----KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A+  +P  +  HG+   KG+     K+SK+LGNV+DP  + ++ G +A+RY+L+ +IA G
Sbjct: 300 ADEEIPT-LLVHGWWNIKGKGGESEKMSKTLGNVVDPDLLADKYGAEAVRYYLMSDIATG 358

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  + ++ L +R N DLAN +GNL++R+++M+ K  +G++    A  +S E        
Sbjct: 359 KDSDFSEERLIQRFNTDLANSLGNLLNRTLNMVAKYREGILKRTDADAQSPEFAREGVEA 418

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEV 454
            +  I       L+H A+ + I++    ++  DA+KPW L K  T  +R   VLY   E 
Sbjct: 419 YVSNINPANAEPLLHHAIDRAINIAVACNQSIDAEKPWALAKDATQAERLDAVLYRLAES 478

Query: 455 IRQLAILLQAFVPKLANKIFDILFV-------ADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           +R  AILL   +PK A+ IFD L         A+     ++    L  G  L K   P+F
Sbjct: 479 LRITAILLSPVLPKSAHGIFDQLNWKMDLSGKAERFHLAEAQWGGLPDGHQLGKP-TPLF 537

Query: 508 PRF 510
           PR 
Sbjct: 538 PRI 540


>gi|240114050|ref|ZP_04728540.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 700

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 224/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 198

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGGETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 379 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 549

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 550 KYEHLMQR 557


>gi|49478861|ref|YP_039056.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|68565980|sp|Q6HBM0|SYM1_BACHK RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|49330417|gb|AAT61063.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 544

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 240/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+    
Sbjct: 302 PAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLIVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|89902044|ref|YP_524515.1| methionyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123091151|sp|Q21TB9|SYM_RHOFD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89346781|gb|ABD70984.1| methionyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 700

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 144/566 (25%), Positives = 233/566 (41%), Gaps = 68/566 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L+++TA+ Y N   HIGH  E I AD+  R+ R+ G  V F    D HG  I  AA+ 
Sbjct: 3   RQLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMMGNAVHFVCADDCHGAPIMIAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + FV   +   +   D   I +D++  T    +H+  + +++ +   G I     
Sbjct: 63  VGKTPQQFVADIASGRKPYLDGFHIGFDNWHSTDGAENHELAQAIYRDLKAAGLISTRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           + ++      +  D  +             G + +   A ++P +               
Sbjct: 123 AQFFDTEKNMFLPDRFIKGECPKCGAKDQYGDNCEECGAVYSPTELKNPYSALSGVTPVL 182

Query: 160 MEEEGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF------VKSGLKDLS 208
            + E YFF+LS      + ++  +      +  L  E  N++  +       K  L D  
Sbjct: 183 RDSEHYFFKLSDPRCVEFLEQWTTDTNPRGQSRLQAEVYNKIKEWLLPDAEGKRDLGDWD 242

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----------PDGSKAKFWPA 258
           +SR    +GI+IPD P    YVW+DA   YL                           PA
Sbjct: 243 ISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLAALKNRFIKLAGDATTGAQHYDDFMADPA 302

Query: 259 D--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               H IGKDI+ FH ++WPA L  +    P  VF HGF+    EK+SKS G  +DP++ 
Sbjct: 303 TEQYHFIGKDIITFHTLFWPAMLHFSGRKTPNAVFVHGFLTVNSEKMSKSRGTGLDPLKY 362

Query: 317 IE-EVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +   +  + LRY+L  ++    +D  +  +    RVN+DL     N+ SR+   I K + 
Sbjct: 363 LSLGMNPEWLRYYLATKLTARNEDVEFSPEDFMARVNSDLVGKYINIASRAAGFIAKRFG 422

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G     G  ++   ++L         I +  + +   +AL + + L   V+ Y DA KPW
Sbjct: 423 GQ---LGVISDDGAALLKQIQIERTSIEQLYEAREFAKALRETMLLADRVNEYVDANKPW 479

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           EL K      R   V  V +E  R L   L+  +P LA ++   L +  E   F S+ Q 
Sbjct: 480 ELAKQTGMETRLHDVCTVCIEAFRALTAYLKPVLPLLAAQVEVFLNI--EPLSFASVSQT 537

Query: 493 LKPGFMLH-----------KTFDPIF 507
           L     +            K  + +F
Sbjct: 538 LGAVHRIGDYKHLMQRVDIKQLEALF 563


>gi|59802352|ref|YP_209064.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|68565958|sp|Q5F585|SYM_NEIG1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|59719247|gb|AAW90652.1| putative methionyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 684

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +     +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 363 MRYYIAAKLNGKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|78779318|ref|YP_397430.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78712817|gb|ABB49994.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 511

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 168/456 (36%), Positives = 248/456 (54%), Gaps = 10/456 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I+T + Y N +PH+G  Y  II D +AR+ RL G DV+F TG DEHG KI + A   
Sbjct: 2   TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLVGEDVIFITGVDEHGLKIQRTANEK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   D+ S  F       +IS+D FIRT+ K H       ++++    DIY G   
Sbjct: 62  GIEPKSHCDEISEVFNINWKNWNISFDKFIRTSSKNHEFVVNEFYERVKSSDDIYMGVQK 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWY +  E + ++ E    +           ++W  EE  FFRLS YQ   +    + P 
Sbjct: 122 GWYCVGCEEFKDNPE---NSSTYKCPIHQKNLEWKNEENLFFRLSKYQK-EIEKIINEPS 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           FI PIER+NE+I+FV  GLKD S+SR    WGI +P    +  YVW DAL  Y++     
Sbjct: 178 FIEPIERKNEIINFVSRGLKDFSISRTNVSWGIPVPGYDNHTFYVWFDALLGYVSAISSD 237

Query: 246 DNPDGSKAKF---WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            + +  +      WPAD+H+IGKDILRFHA+YWPA L+SAN+ +PKKVF HGF+  +G+K
Sbjct: 238 TSDNSLERSINGGWPADVHLIGKDILRFHAVYWPAMLISANMKVPKKVFGHGFLTREGQK 297

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGNV+DP  ++ + G D +R++L+++I+ G DG +        +N DLAN IGNL+
Sbjct: 298 MGKSLGNVLDPDLLLSKYGNDPVRWYLIKDISLGNDGDFQHKRFVDIINNDLANTIGNLL 357

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+ SM  K +   +P        ++ + +     ++    N     +  A  +V+SL  
Sbjct: 358 NRTSSMSRKWFGNKVPNNENIINENK-LENYAKISVKNYIHNFDIYKLDLAANEVLSLAI 416

Query: 423 EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIR 456
             + Y +  +PW L K   N      ++Y  +E  R
Sbjct: 417 NTNLYLNDNQPWMLIKEIDNLPLVKEIIYNVLESTR 452


>gi|195335733|ref|XP_002034518.1| GM19865 [Drosophila sechellia]
 gi|194126488|gb|EDW48531.1| GM19865 [Drosophila sechellia]
          Length = 1022

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 116/549 (21%), Positives = 219/549 (39%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + LF  GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLFICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNTA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    +++K GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P +   + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K++   +P     T+ 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAVRNNSELLNNLGNFVNRALVFCEKNFSSTVP-EVITTQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDR 443
           +  +L++ +R L+    +M+   +   +  ++++    + Y  +Q+PW L K       R
Sbjct: 670 ELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQPWNLLKGTDDQKKR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
           AST++ + V +   LA LL  ++P  A  +F  L         +   +   L  G ++ K
Sbjct: 730 ASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPFVTLLLPAGHIIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 P-SPLFAKL 797


>gi|268602591|ref|ZP_06136758.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268586722|gb|EEZ51398.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 684

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGGETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 533

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 534 KYEHLMQRM 542


>gi|290447949|emb|CBK19452.1| C. elegans protein F58B3.5b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 676

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 114/548 (20%), Positives = 219/548 (39%), Gaps = 43/548 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I+ A+ Y N  PH+G+    ++ ADV AR+  L G    +  GTDE+G      
Sbjct: 33  GKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTATETK 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G T +   D+     + + +   I +  F RTT     + C+ ++ K+   G    
Sbjct: 93  ALQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSS 152

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                 Y  + E +  D  V            +G          N V   + + +  + +
Sbjct: 153 QSVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKAT 212

Query: 171 A-----------------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                                + L    +  +            +++K GL    ++R  
Sbjct: 213 PEVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRCITRD- 271

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P D   + + YVW DA   YL+ T  +   + +K    P ++   + +GKD +
Sbjct: 272 LKWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFVGKDNV 331

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FHA+ +P   L A  N  +   + +  ++ ++  K SKS G  I        E+  D  
Sbjct: 332 AFHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTEIPADIW 391

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +  D    +VN++L N +GN ++R++S +   + G++P     T 
Sbjct: 392 RFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANSFGGVVPEMN-LTN 450

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
            D  +LS       +  +      +  A+  ++++    ++Y  AQ PW L K + +   
Sbjct: 451 DDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPWVLMKKDEEGKK 510

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           RA T++ V   +   +++LL   +P ++  I +   +             LK G  + + 
Sbjct: 511 RAGTIIGVAANIAYHVSVLLYPIMPTISATIREQCGLPALPLFTPFPICYLKAGHKIGQP 570

Query: 503 FDPIFPRF 510
             P+F + 
Sbjct: 571 -SPLFQKL 577


>gi|261749393|ref|YP_003257078.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497485|gb|ACX83935.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 561

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 138/536 (25%), Positives = 250/536 (46%), Gaps = 38/536 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   K  ++ A  Y N   HIGH A   + AD+  R+ R    +V+F  G+DEHG  I  
Sbjct: 3   KSNNKYTVTAAFPYANGPIHIGHLAGVYLPADIFVRYLRRKKKEVIFICGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T K  V++     +D  +   I +D++ RT+   H       +KK+  +  I+
Sbjct: 63  QAKKENTTPKEIVNKYHFMIKDCFENFGIHFDNYSRTSTVIHQKISTSFFKKLHKEKKIF 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM--------- 160
           +     +Y  + + +  D  +Y            G   +   +  +P + +         
Sbjct: 123 EKVSEQYYDNQAKQFLADRYIYGICPHCKHKEAYGDQCESCGSSLSPEELINPLSTISGS 182

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + + ++F L+ YQ+ L  +     +    +    +  S++  GL+  +++R   D
Sbjct: 183 NPVLKKTKHWYFPLNEYQNFLEKWILMDHQKDWKVNVYGQAKSWLDQGLQPRAITRD-LD 241

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           WGI IP +   ++YVW +A   Y+++T           K +  D     +  IGKD + F
Sbjct: 242 WGIPIPKEIGKVLYVWFEATIGYISSTIEWAKRKKKDWKPYWKDQRTKLIQFIGKDNIVF 301

Query: 271 HAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALR 326
           H I +PA     +    LP K+ ++ F+  + EKIS S    +   E + +     D LR
Sbjct: 302 HCIIFPAVLKAYNQGYILPDKILANEFLNLENEKISTSRNWGVWVHEYLRDFPNQQDTLR 361

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L+  +   KD  ++    +K  N +L   +GN V+RS+++I K  +G+IP PG F+ +
Sbjct: 362 YILIANMPEKKDNNFNWKDFQKTNNTELVAILGNFVNRSLTLIQKYNNGIIPHPGIFSIT 421

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+SIL    +  + I + +++     AL   + L    ++Y   ++PW +KKT   R  T
Sbjct: 422 DKSILKKIRKYPENIGDLIESFRFREALVCFMDLARLGNKYLTEEEPWNIKKTE-QRIET 480

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-FQSLDQRLKPGFMLHK 501
           +LYV+++++  LA L + F+P  ANK+  +L +        +++ + L PG +L K
Sbjct: 481 ILYVSLQIVGMLAQLAELFLPYTANKLLKMLRLEAYFWNKIENVKEFLCPGHVLGK 536


>gi|240114715|ref|ZP_04728777.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600362|ref|ZP_06134529.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584493|gb|EEZ49169.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 684

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 225/548 (41%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|240122554|ref|ZP_04735510.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268681142|ref|ZP_06148004.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621426|gb|EEZ53826.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 684

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +     +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 363 MRYYIAAKLNGKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|150403248|ref|YP_001330542.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|187647747|sp|A6VIW5|SYM_METM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150034278|gb|ABR66391.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 663

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 141/534 (26%), Positives = 226/534 (42%), Gaps = 46/534 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL G +V+   GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L++S+D F RT    H +T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  + + Y  D  V                               Y    ++  +  
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE   P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPEM--PEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
           P     +MYVWI+A   Y++ T  L             D    H IGKDI   HA++WP 
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGGIWEDYWLENTGDSKISHFIGKDITVHHAVFWPG 297

Query: 278 F-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                    +P  V S G++  + +K+S S   V+   + IE    D LRYF +      
Sbjct: 298 ILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFMINAPLN 357

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCS 395
           +D  +  D  +KR+N +L + IGN   R++    + +            + D+ ++S C 
Sbjct: 358 RDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPIVDSNQLIDEDKKLISKCE 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             L  +   ++      AL ++I L  E + YF    PW +K  + +R   V+Y     +
Sbjct: 418 STLNRVDSLIREYNFKDALMEIILLAKEGNAYFQGMAPWAIK--DDERLKEVMYTCSVAL 475

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +  LL +F+P+    + + +    E    +     L       K    IF +
Sbjct: 476 KYIIYLLSSFMPEKTALLLEYMN---EELDLEVRGNPL-------KKPKVIFTK 519


>gi|330947142|ref|XP_003306845.1| hypothetical protein PTT_20116 [Pyrenophora teres f. teres 0-1]
 gi|311315437|gb|EFQ85056.1| hypothetical protein PTT_20116 [Pyrenophora teres f. teres 0-1]
          Length = 513

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 180/507 (35%), Positives = 263/507 (51%), Gaps = 26/507 (5%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ DV+ R+H L G   L  TGTDEHG K+ +AA  AG+  K F D+ +  F+++A   
Sbjct: 1   MVLTDVVKRWHLLKGEKALLCTGTDEHGLKVQRAAAKAGIDPKSFCDKGAEIFKELARKA 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +I+ D F+RTT++ H +  +  W  + +KG IY+  + GWYS+ DE +Y    V    D 
Sbjct: 61  EITNDHFVRTTDREHKEAVQYAWFLLQEKGLIYEQKHEGWYSVTDECFYPQSGVQPYLDP 120

Query: 148 QYYNAQHN------PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                          V+W  EE Y FRLSA++DKLL +Y+++PE+I+P  R N+V+  V+
Sbjct: 121 PTGRKIMTSIETGSEVEWSSEENYHFRLSAFRDKLLEFYKNNPEWIVPETRMNDVVQAVE 180

Query: 202 SGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           SGL+DLS+SR      WGI++P D    +YVW+DAL NY T  GY   P   +   WPAD
Sbjct: 181 SGLEDLSISRPYDRLTWGIRVPGDDSQTIYVWLDALMNYATKAGYPWTPGREQEGGWPAD 240

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            HVIGKDI+RFH IYWPAFL++  LPLPKK+ +H      G K+SKS G V+DP   I+ 
Sbjct: 241 CHVIGKDIVRFHCIYWPAFLMALGLPLPKKILTHAHWTLGGSKMSKSTGKVVDPFLAIDR 300

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D +R+++VRE     D  YD   +  + +  L   +GNL SR V        G I  
Sbjct: 301 FGSDVMRFYMVREGGIRDDASYDNARIIMQYDKFLRQNLGNLASRVVRGKGWSVRGAIER 360

Query: 380 PGAFTESDESI-------LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            G  +  D           +  + +  E           RA+  +   +   + +F    
Sbjct: 361 IGGRSAEDWEEGPGSKFRKNSLATIASETNAAFDAYDPRRAVFGITEFIRGTNAFFTMSA 420

Query: 433 PWELK-----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           PW+           +    ++Y++ E +R   ILLQ ++P  AN++ D L V  + R F+
Sbjct: 421 PWDKILNFGPGEPGEDVDKIIYLSAEALRIAGILLQPYMPNKANRLLDQLGVHRDRRTFE 480

Query: 488 --SLDQRLKPGFMLHKTFDP----IFP 508
              LD  L  G  L          +FP
Sbjct: 481 YCKLDADLDYGTPLVDVGKAQQGVLFP 507


>gi|116198129|ref|XP_001224876.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51]
 gi|88178499|gb|EAQ85967.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51]
          Length = 797

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 173/538 (32%), Positives = 259/538 (48%), Gaps = 56/538 (10%)

Query: 3   EREKLYISTAIAYPNAQ----PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           E +  Y++T I Y NA     PHIGH Y M++ADV  R+  L G    F TGTDEHG K+
Sbjct: 37  EDKPFYVTTPIFYVNAVRLVEPHIGHMYSMVLADVFKRWQTLIGKKAFFVTGTDEHGMKV 96

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            +AA  A    K   D+N+  F ++A +  I YD F+RTT++ H       W        
Sbjct: 97  QQAAALADKEPKQLCDENAEKFEELARMARIDYDRFMRTTDRDHVQAVEHFWSS------ 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                             +  + + GA         N V+W+EE+ Y FR++  +D+LL 
Sbjct: 151 ------------------STRKPFTGAVYMASAETKNKVEWVEEKNYCFRMTELKDRLLD 192

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
           +YE +P +I P  R NEV+ +VK+  +DLS+SR      WGI++P+DP   +YVW+DAL 
Sbjct: 193 FYEKNPGWIEPASRMNEVVDWVKNHFEDLSISRPVQRLSWGIRVPEDPSQTIYVWVDALI 252

Query: 237 NYLTTTGYLDNPDGSKAKF-WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           NY+T  G+ D   G   K  WPAD+HVIGKDILRFH +YWPA L++ ++PLPKKV  H  
Sbjct: 253 NYITAAGFPDWTPGESHKGGWPADVHVIGKDILRFHCVYWPALLMALDIPLPKKVLVHSH 312

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV----- 350
                +K+SKS+GNV++P+  +   GVDA RY+L+ +     D  Y  D L  +      
Sbjct: 313 WTLNNKKMSKSVGNVVNPLYAMNRWGVDATRYYLLAQGGIADDANYANDHLVIKYKKYLQ 372

Query: 351 ----------NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                         A  + ++V+RS      D       P        +   +       
Sbjct: 373 GGLGNLLGRLTRPKAWNVRDIVTRSPPDHDFDVMMHSFMPKEIRLDLHATEQMLKGAAPI 432

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL----YVTVEVIR 456
           +   M+      A+ ++  + + ++     ++PW L K+       V     ++  E +R
Sbjct: 433 VASRMEKHEPKEAIRKIFKISTTLNELLSRREPWALVKSEDAADHAVADKTLFLVAEGLR 492

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--LKPGFMLHKTF----DPIFP 508
              ILLQ F+P  A ++ D L VA + R F     R  +  G  +        D +FP
Sbjct: 493 ISGILLQPFLPDKAAQLLDTLGVARDKRTFAHAVPRCDMDYGIPMVDPGSGRADGLFP 550


>gi|294339578|emb|CAZ87937.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Thiomonas sp. 3As]
          Length = 721

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 138/577 (23%), Positives = 229/577 (39%), Gaps = 79/577 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + + +++TA+ Y N   HIGH  E I AD   RF R+ G +V F    D HG  I  
Sbjct: 1   MTSKRRFFVTTALPYANGPFHIGHIMEYIQADTWVRFQRMQGHEVHFVGADDAHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +       D   I +D++  T    +H   + +++ +   G I 
Sbjct: 61  AAEKAGETPQQFVADIAAGRAQYLDGFHIRFDNWHNTDAPENHQLAQDIYRALRKNGLIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV------------ 157
                 ++      +  D  +             G   +   A + P             
Sbjct: 121 MRDIEQFFDPVKGMFLPDRYIKGQCPKCGAADQYGDACEVCGAVYAPTELKHPYSTLSGA 180

Query: 158 --QWMEEEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV------KSGL 204
             +  + E YFF+LS      Y         +H +  L  E  N+V  +         GL
Sbjct: 181 TPELRKSEHYFFQLSSDRCADYLRDWTQAANAHGQPHLQTEVLNKVREWFTTDENGHGGL 240

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY------------LTTTGYLDNPDGSK 252
            D  +SR    +GI+IPD P    YVW+DA   Y                 +  +     
Sbjct: 241 ADWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNHFDKGQAAQHWHAPSRTAQS 300

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              + AD     +H IGKDI+ FH ++WPA L  +    P ++  HGF+   GEK+SKS 
Sbjct: 301 FDAFVADPAVEQVHFIGKDIVYFHTLFWPAMLHFSGRKTPSQINVHGFVTVGGEKMSKSR 360

Query: 308 GNVIDPIEV-IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           G  I P++     +  + LRY+L  ++    +D  +  +    RVN+DL     N+ SR+
Sbjct: 361 GTGISPLKYLDIGLNPEWLRYYLAAKLTARVEDVDFTPEDFVARVNSDLIGKYVNIASRA 420

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I + +DG +       +    +      +  ++    + +   RAL ++++    ++
Sbjct: 421 AKFISQYFDGKLGYAHNTGD----LRDAAKALADDVAAAFEAREYARALREIMAYADRIN 476

Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             FDA +PW L K    RA         +     L+++L   +P L  ++   LF  + +
Sbjct: 477 TAFDAAQPWILAKDEARRAELQDACSQALAGFWLLSVMLSPVLPALTARVARELFGLERD 536

Query: 484 RCF-------------QSLDQRLKPGFMLHKTFDPIF 507
             +             Q L  R+ P     K  D +F
Sbjct: 537 FVWSDATELPQHAAPYQHLMHRIDP-----KRLDALF 568


>gi|121603729|ref|YP_981058.1| methionyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|187647741|sp|A1VKF9|SYM_POLNA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120592698|gb|ABM36137.1| methionyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 707

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 147/571 (25%), Positives = 240/571 (42%), Gaps = 68/571 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +L+++TA+ Y N   HIGH  E I AD+  R+ R+ G  V F    D HG  I  AA
Sbjct: 2   SQRRLFVTTALPYANGNFHIGHIMEYIQADIWVRYQRMQGNAVNFVGADDAHGAPIMIAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG---DI 119
           + AG T + FV   +   +   D   IS+D++  T    +H+  R +++ + D      I
Sbjct: 62  EKAGKTPQQFVADIASGRKPYLDGFHISFDNWSSTDSPENHELARQIYRDLRDNPQGSLI 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------ 162
                  ++      +  D  +             G + +   A + P   +        
Sbjct: 122 ETKTIEQFFDPEKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAVYAPTDLINPYSALSG 181

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---------VKSGLK 205
                   E +FF+LS  +        +    + P         F            GL 
Sbjct: 182 VTPVLKSSEHFFFKLSDARCVEFLESWTQDGKLQPEVANKVKEWFSVRENADGTQSEGLG 241

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----L 260
           D  +SR    +GI+IPD P    YVW+DA   YL +   L +  G     + AD      
Sbjct: 242 DWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDRRGESYDDYMADPKLEQY 301

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE- 318
           H IGKDI+ FH ++WPA L  +    P  +F HGF+  + GEK+SKS G  +DP++ +  
Sbjct: 302 HFIGKDIVTFHTLFWPAMLHFSGRKTPDNIFVHGFLTVNNGEKMSKSRGTGLDPLKYLSL 361

Query: 319 EVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            +  + LRY+L  +  A  +D  ++ D    RVN+DL     N+ SR+   + K +DG I
Sbjct: 362 GMNPEWLRYYLAAKLNARNEDIDFNADDFMARVNSDLVGKFINIASRAAGFLTKRFDGKI 421

Query: 378 -PTPGAFTESDES-----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
               G F   D        +S       EI E  + + + +A+ +++ +   ++  +DA 
Sbjct: 422 GDASGDFPNPDGQGYPSLAISEIGACAAEISELYEQRELGKAMRKIMEIADGLNSDWDAA 481

Query: 432 KPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +PW+L K+       R   +   T+E  R L + L+  +P LA ++   L +   N  F 
Sbjct: 482 QPWKLAKSEEPQQLARLQRICSNTIEGFRLLTLYLKPVLPALAIEVESFLKIDPLN--FS 539

Query: 488 SLDQRLKPGFML-----------HKTFDPIF 507
              + L  G  +            K  D +F
Sbjct: 540 DATKALPKGHPIGDYKHLMQRVDVKQLDALF 570


>gi|196040453|ref|ZP_03107753.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
 gi|196028585|gb|EDX67192.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
          Length = 544

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 133/539 (24%), Positives = 240/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I +IL +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNILSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|240013183|ref|ZP_04720096.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
          Length = 684

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 533

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 534 KYEHLMQRM 542


>gi|87118382|ref|ZP_01074281.1| methionyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86166016|gb|EAQ67282.1| methionyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 685

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 132/544 (24%), Positives = 224/544 (41%), Gaps = 47/544 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K+ +++A+ Y N   H+GH  E I  DV  RF +L G         D HG  I   
Sbjct: 3   QSQRKILVTSALPYANGSIHLGHMLEHIQTDVWVRFQKLRGHLCTAVCADDAHGTAIMIK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G T +  ++   +      +   I+YD++  T  + + +    ++K + D   I  
Sbjct: 63  ADKNGETPEQLIEAVRQEHMADFNDFMIAYDNYHSTHSEENRELSSHIYKTLRDNDKIAV 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYY------NAQHNPVQWM---- 160
                 Y    E +  D            E   G + +            NPV       
Sbjct: 123 RSIVQAYDPEKEMFLADRFIKGTCPKCKAEDQYGDNCEVCSATYTAMEMINPVSVYSGAT 182

Query: 161 ----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               E E YFF+L  +Q  L  +  S     L  +  N++  ++ SGL++  +SR    +
Sbjct: 183 PVEKESEHYFFKLPEFQAFLADWTRSGT---LQDQVANKLAEWLDSGLQEWDISRDAPYF 239

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILR 269
           G +IPD P    YVW+DA   Y+ +   L +     +   +W         H IGKDI+ 
Sbjct: 240 GFEIPDAPGKYFYVWLDAPIGYMASFKNLCDRTDGLNFDDYWAKGADTELYHFIGKDIIN 299

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A    P  V +HG++   G+K+SKS G  I     +  +    LRY+ 
Sbjct: 300 FHALFWPAMLECAGYRTPTAVNAHGYVTVDGKKMSKSRGTFIKARTYLNHLDPQYLRYYF 359

Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  A   D   + +   +RVN+D+   + N+ SR+ S I K +D  + T  +  E  +
Sbjct: 360 TAKLNATPDDIDLNLEDFIQRVNSDVVGKVVNIASRTASFINKKFDNQLATEVSEAEMIQ 419

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
           S +         I +  + +   +A+ +V+ L    + Y   Q PW L K      +   
Sbjct: 420 SFID----AGDLIADCFEKREYSKAIREVMRLADVANTYIADQAPWVLAKNEETLPKVQE 475

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  V++ +   LA  L+  +P +       L    +   + +  + L  G  ++K F  +
Sbjct: 476 VCTVSLNLFSILATYLKPILPNMVADAEAFLG---KELTWDN-REALLFGKSVNK-FKAL 530

Query: 507 FPRF 510
             R 
Sbjct: 531 MARI 534


>gi|239999868|ref|ZP_04719792.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240015623|ref|ZP_04722163.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 684

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 182

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 363 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 533

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 534 KYEHLMQRM 542


>gi|229094153|ref|ZP_04225233.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228689256|gb|EEL43077.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 544

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|331006642|ref|ZP_08329926.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419557|gb|EGG93939.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 705

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 121/552 (21%), Positives = 220/552 (39%), Gaps = 60/552 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G    +    D HG  I   A+ 
Sbjct: 8   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHKCTYVCADDAHGTAIMLKAEQ 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  +               + +D+F  T  + +     ++++++   G I     
Sbjct: 68  NGISPEEQIANIKAEHEKDFADFFVEFDNFHSTHSEENKALSELIYERLLANGHIASRNI 127

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQW-------------- 159
           +  Y    E +  D            E   G + +   A ++P                 
Sbjct: 128 TQAYDPEKELFLADRYIKGTCPKCKTEDQYGDNCEACGATYSPTDLLNPKSAISGATPIE 187

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +FF+L  + + L ++  +     L  E  N++  ++ SGL++  +SR    +G +
Sbjct: 188 KESEHFFFKLPEFTEFLKNWTRAG---HLQTEMANKLAEWLDSGLQEWDISRDAPYFGFE 244

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-------------------ADL 260
           IP+ P    YVW+DA   Y+ +   L    G   + +                       
Sbjct: 245 IPNQPGKYFYVWLDAPIGYIASFKNLCERTGENWEDYWIDDESDDVSSDNGRLNNGTELY 304

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDI+ FHA++WPA L SA    P  V  HGF+   G+K+SKS G  I+    +E +
Sbjct: 305 HFIGKDIVNFHALFWPAMLHSAKFRTPTAVNVHGFLTVNGQKMSKSRGTFINARSYLEHL 364

Query: 321 GVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LRY+   ++     D   + +    RVN+DL   + N+ SR+   I K    +   
Sbjct: 365 KPEYLRYYFAAKLTSGVDDLDLNLEDFLVRVNSDLVGKVVNIASRTAKFIQKSGGIL--- 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             + T  D  +        + I +  + +   +A+ ++++L    + Y  A+ PW L K 
Sbjct: 422 --SDTIEDPELWQTFVDANETIAKLYEAREFAKAMREIMNLADAANEYIAAKAPWALAKQ 479

Query: 440 NPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
                    V  + + + R +   L+  +P+L+      L        + +  Q    G 
Sbjct: 480 EGQEQQVIDVCTLGINMFRVITTYLKPVLPELSRNAEAFLNTE---LTWANATQF--AGE 534

Query: 498 MLHKTFDPIFPR 509
                F P+  R
Sbjct: 535 HSINKFKPLLTR 546


>gi|296135470|ref|YP_003642712.1| methionyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795592|gb|ADG30382.1| methionyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 725

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 138/577 (23%), Positives = 229/577 (39%), Gaps = 79/577 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + + +++TA+ Y N   HIGH  E I AD   RF R+ G +V F    D HG  I  
Sbjct: 1   MTSKRRFFVTTALPYANGPFHIGHIMEYIQADTWVRFQRMQGHEVHFVGADDAHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+ AG T + FV   +       D   I +D++  T    +H   + +++ +   G I 
Sbjct: 61  AAEKAGKTPQQFVADIAAGRAQYLDGFHIRFDNWHNTDAPENHQLAQDIYRALRKNGLIA 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV------------ 157
                 ++      +  D  +             G   +   A + P             
Sbjct: 121 MRDIEQFFDPVKGMFLPDRYIKGQCPKCGAADQYGDACEVCGAVYAPTELKHPYSTLSGA 180

Query: 158 --QWMEEEGYFFRLS-----AYQDKLLSYYESHPEFILPIERRNEVISFV------KSGL 204
             +  + E YFF+LS      Y         +H +  L  E  N+V  +         GL
Sbjct: 181 TPELRKSEHYFFQLSSDRCADYLRDWTQATNAHGQPHLQTEVLNKVREWFTTDENGHGGL 240

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY------------LTTTGYLDNPDGSK 252
            D  +SR    +GI+IPD P    YVW+DA   Y                 +  +     
Sbjct: 241 ADWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNHFDKGQAAQHWHAPSRTAQS 300

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              + AD     +H IGKDI+ FH ++WPA L  +    P ++  HGF+   GEK+SKS 
Sbjct: 301 FDAFVADPAVEQVHFIGKDIVYFHTLFWPAMLHFSGRKTPSQINVHGFVTVGGEKMSKSR 360

Query: 308 GNVIDPIEV-IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           G  I P++     +  + LRY+L  ++    +D  +  +    RVN+DL     N+ SR+
Sbjct: 361 GTGISPLKYLDIGLNPEWLRYYLAAKLTARVEDVDFTPEDFVARVNSDLIGKYVNIASRA 420

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I + +DG +       +    +      +  ++    + +   RAL ++++    ++
Sbjct: 421 AKFISQYFDGKLGYAHNTGD----LRDAAKALADDVAAAFEAREYARALREIMAYADRIN 476

Query: 426 RYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             FDA +PW L K    RA         +     L+++L   +P L  ++   LF  + +
Sbjct: 477 TAFDAAQPWILAKDEARRAELQDACSQALAGFWLLSVMLSPVLPALTARVARELFGLERD 536

Query: 484 RCF-------------QSLDQRLKPGFMLHKTFDPIF 507
             +             Q L  R+ P     K  D +F
Sbjct: 537 FVWSDATELPQHAAPYQHLMHRIDP-----KRLDALF 568


>gi|228936320|ref|ZP_04099118.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823152|gb|EEM68986.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 544

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 240/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+    
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLIVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|121611392|ref|YP_999199.1| methionyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|187647777|sp|A1WRC4|SYM_VEREI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121556032|gb|ABM60181.1| methionyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 691

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 142/551 (25%), Positives = 226/551 (41%), Gaps = 48/551 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    KL+++TA+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I  
Sbjct: 1   MPSTRKLFVTTALPYANGPFHLGHLMEYIQADIWVRFQRMQGHEVNFVGADDTHGAPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD-- 118
           AA+ AG T + FV   +   +   D   +S+D++  T    +H+  R +++ + D+ D  
Sbjct: 61  AAEKAGKTPQQFVADIAAGRKPYLDGFHLSFDNWHSTDAPENHELARQIYRDLRDRADGS 120

Query: 119 -IYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE---- 162
            I +     ++      +  D  +             G + +   + + P + ++     
Sbjct: 121 LIERRSIEQFFDPGKSMFLPDRYIVGECPRCHAKEQYGDNCEQCGSVYAPAELIDPVSAL 180

Query: 163 ----------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---------VKSG 203
                     E +FF+LS  +        +    + P         F            G
Sbjct: 181 SGAKPELRSSEHFFFKLSDPRCVEFLQRWTQDGKLQPEVANKVREWFGLRSNPDGSCSEG 240

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---- 259
           L D  +SR    +GI+IPD P    YVW+DA   YL     L    G     + AD    
Sbjct: 241 LDDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLAALKNLLEKRGQNYDAYMADPALE 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             H IGKDI+ FH ++WPA L  +    P  VF HGF+   GEK+SKS G  +DP++ + 
Sbjct: 301 QYHFIGKDIVTFHTLFWPAMLHLSGRKTPDNVFVHGFLTINGEKMSKSRGTGLDPLKYLS 360

Query: 319 -EVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
             +  + LRY+L  +  A  +D     +    RVN+DL     N+ SR+   + K +   
Sbjct: 361 LGMNAEWLRYYLATKLSARNEDMDLGTEDFMVRVNSDLIGKYVNIASRAAGFLTKRF--A 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                 F  +  ++L+        I +  Q +   +A  +++ L  +V+ Y D  KPWEL
Sbjct: 419 GRLTSDFGAAGLALLADLHGARDTIAQWYQAREFGKATREIMLLADKVNAYVDRNKPWEL 478

Query: 437 KKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            K   N      V  V +     L   L   +P LA    D +    +        Q + 
Sbjct: 479 AKDAANGQALHQVCSVLINAFATLTRYLSPVLPALARAAQDFVGQDMQRWDAGGAVQAIA 538

Query: 495 PGFMLHKTFDP 505
           P   L +   P
Sbjct: 539 PYQHLMQRVTP 549


>gi|145507618|ref|XP_001439764.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406959|emb|CAK72367.1| unnamed protein product [Paramecium tetraurelia]
          Length = 840

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 123/550 (22%), Positives = 232/550 (42%), Gaps = 48/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ AD  AR+ RL G + L+  GTDE+G     
Sbjct: 268 KGKRNVLITSALPYVNNVPHLGNIIGCVLSADTFARYSRLRGYNTLYVCGTDEYGTATEV 327

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +    +     +++ D  DI +D F RT+   H +  + ++  +  K    
Sbjct: 328 KAIQENMTPQQICTKYFEIHKNVYDWFDIDFDYFGRTSTPVHTEITQEIFNHLHPKYTTQ 387

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
           K      +    + Y  D  V            +G          +PV+ +  + Y  + 
Sbjct: 388 K-TTPQTFCSHCKMYLADRYVSGTCPHCQYDDARGDQCDSCGKLLDPVELINSKCYICKN 446

Query: 170 SA---------------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                             +      + +           N   +++K GLK+  ++R   
Sbjct: 447 KPEIKDTKHIYINLPEIQERLEKWIHSTSKSGQWSQNSYNVSKAWLKLGLKERCITRD-L 505

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+++P +     + YVW DA   YL+ T      D  +    P ++     +GKD + 
Sbjct: 506 KWGVQVPLEEYKDKVFYVWFDAPIGYLSITA-NFIKDWKQWWMNPENVELFQFMGKDNVP 564

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           FH + +P+ L+   L     K + +  ++ ++  K SKS G  +        E+  +  R
Sbjct: 565 FHTVIFPSTLMGTGLDYTLLKTISTTEYLNYEDGKFSKSRGTGVFGDNAQNTEIPNEIFR 624

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFT 384
           Y+L+       D  +  +    + N +L   +GNLV+R+++ I K+Y+  IP       T
Sbjct: 625 YYLLANRPEKSDTVFTWNDFANKNNNELLPNLGNLVNRALNFIYKNYNKQIPQVELNQLT 684

Query: 385 ESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             DE  +++  ++   E  E  +   I  AL + + L S V++Y   +K WE ++    R
Sbjct: 685 PKDEEFINLFLNKFKTEYLEAFEKVEIKDALRKAMELSSLVNKYIQDEKAWEKEQKESKR 744

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----VADENRCFQSL---DQRLKPG 496
           +  +L+V V  IR ++ L++ F+P ++ KI   L        +++ F+ +   D  +   
Sbjct: 745 SDVILFVAVNAIRFVSALIEPFMPSVSAKINFTLGFNQRTEKDDKLFEHVLSYDNNVSAL 804

Query: 497 FMLHKTFDPI 506
             L K   PI
Sbjct: 805 LNLVKPGQPI 814


>gi|293397921|ref|ZP_06642127.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611867|gb|EFF40936.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 719

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 38  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 98  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 217

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 277

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 278 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 337

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 338 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 397

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +     +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 398 MRYYIAAKLNGKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 457

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 458 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 512

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 513 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 568

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 569 KYEHLMQR 576


>gi|302879580|ref|YP_003848144.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582369|gb|ADL56380.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 695

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 130/542 (23%), Positives = 221/542 (40%), Gaps = 54/542 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G +V +    D HG  I   A++
Sbjct: 4   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHEVHYVCADDTHGTPIMLRAES 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +  +   D      + +D +  T    +      ++  + +KG I     
Sbjct: 64  EGITPEALIARVWQEHYDDFAAFHVEFDHYGSTNSAENKVCAESIYLALREKGLIEVRSI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G + +   A + P++ +             
Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCHAKDQYGDNCEVCGAAYAPIELINPYSAVSGAAPVM 183

Query: 163 ---EGYFFRLSA--YQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLSLSRKTFDW 216
              + YFF+LSA   Q  L  +  S         +  E +    ++ L D  +SR    +
Sbjct: 184 RNSDHYFFKLSADTCQQFLREWTRSGSLQSEAANKMQEWLGAEGENKLSDWDISRDAPYF 243

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG-------SKAKFWPAD-----LHVIG 264
           G +IPD P    YVW+DA   Y+ +   L N             ++W  D      H IG
Sbjct: 244 GFEIPDAPGKYFYVWLDAPVGYMGSFRQLCNSRMQDSGSRIEFDEYWKPDSTTELYHFIG 303

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           KDIL FHA++WPA L  A    P K+F+HGF+   GEK+SKS G  I     ++ +    
Sbjct: 304 KDILYFHALFWPAMLEHAGFRTPTKLFAHGFLTVNGEKMSKSRGTFITAKSYVDNIKNTE 363

Query: 325 LRYFL--VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              +    +     +D   + D    +VN+DL     N+ SR    I K +D      G 
Sbjct: 364 YLRYYYAAKINGSMEDLDLNLDDFVAKVNSDLIGKYINIASRCAGFIAKKFD------GK 417

Query: 383 FTESDESILSVCSRVLQ--EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
              +D +  +         EI ++ + +   RAL +++ L    ++Y   QKPWEL K  
Sbjct: 418 LGATDLAASAEFQTAYASGEIAKSFEARDFARALREIMRLADVANQYIAEQKPWELAKQE 477

Query: 441 PDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
              A         + + R L + L+  +P LA ++   L +A     +  + Q L  G  
Sbjct: 478 GAEAQLHIACSTAMTLFRDLTLYLKPVLPVLAGQVEAFLNIAP--LMWTGVWQALPNGHG 535

Query: 499 LH 500
           ++
Sbjct: 536 IN 537


>gi|332173575|gb|AEE22829.1| methionyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 675

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 135/544 (24%), Positives = 233/544 (42%), Gaps = 47/544 (8%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ +++A+ Y N   H+GH  E I  D+  RF R+ G ++      D HG  + 
Sbjct: 1   MSSQPRKILVTSALPYANGSIHLGHLLEHIQTDIWTRFQRMCGHEIYSVCADDAHGTPVM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             AQ  G+T +  V +             + YD++  T    + +   +++ +++D G I
Sbjct: 61  LKAQELGITPEEMVARTRAEHHQDLLDFFVEYDNYHVTHSDENKELSELIYNRLNDAGYI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQW--------- 159
            K   S  +      +  D            E   G       A ++P +          
Sbjct: 121 SKRTISQLFDPEKNMFLPDRFVKGTCPSCGTEDQNGDSCDSCGATYDPTEMKNPRSVVSG 180

Query: 160 -----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 + E +FF L  + D L ++ +S     L  E  N++  +   GL+   +SR   
Sbjct: 181 ATPILKDSEHFFFDLPQFSDMLQAWLKSDA---LQSEISNKLEEWFDKGLQQWDISRDAP 237

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDIL 268
            +G +IP  P    YVW+DA   Y+ +     D  D +  +FW AD      H IGKDI 
Sbjct: 238 YFGFEIPGAPNKFFYVWVDAPVGYMASFKNLCDRSDINFDEFWGADSDAELYHFIGKDIT 297

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH ++WPA L  A    P  V  HGF+   G K+SKS G  I     +E +  + LRY+
Sbjct: 298 YFHCLFWPAMLEGAGFRKPTGVNVHGFVTVNGAKMSKSKGTFIKGRTYLEHLNPEYLRYY 357

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              ++     D   + +   ++VN+DL   + N+ SR  S I K +DG +         +
Sbjct: 358 FASKLGANVTDIDLNFEDFAQKVNSDLVGKVVNIASRCASFITKRFDGKLSN----NVLE 413

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST- 446
             +++   +    I +  + +  H+A+ +++ L  + +++ DA  PW   K    +A T 
Sbjct: 414 PELVAEFQQAQASIAQAFEERQYHKAIREIMGLADKANQFIDANAPWVTIKDESKQAFTH 473

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  + + + R L + L+  VPKLA +    L    ++  + S    L  G  ++K F  
Sbjct: 474 DVCSLGINLFRMLMVYLKPVVPKLAEQAEAFLN---DDLSWTSAQSVLT-GHEINK-FKA 528

Query: 506 IFPR 509
           +  R
Sbjct: 529 LMQR 532


>gi|30265080|ref|NP_847457.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530586|ref|YP_021935.1| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187891|ref|YP_031144.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317025|ref|ZP_00389984.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165870881|ref|ZP_02215533.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634931|ref|ZP_02393249.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639976|ref|ZP_02398244.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685894|ref|ZP_02877117.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707026|ref|ZP_02897483.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652275|ref|ZP_02934778.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567277|ref|ZP_03020192.1| putative methionyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817810|ref|YP_002817819.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229602311|ref|YP_002869277.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
 gi|254687371|ref|ZP_05151228.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725384|ref|ZP_05187167.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733720|ref|ZP_05191436.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740558|ref|ZP_05198249.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254753180|ref|ZP_05205216.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761523|ref|ZP_05213544.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|68566041|sp|Q81XF9|SYM2_BACAN RecName: Full=Methionyl-tRNA synthetase 2; AltName:
           Full=Methionine--tRNA ligase 2; Short=MetRS 2
 gi|254782848|sp|C3P025|SYM_BACAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782849|sp|C3LD96|SYM_BACAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30259757|gb|AAP28943.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47505734|gb|AAT34410.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181818|gb|AAT57194.1| methionyl-tRNA synthetase, putative [Bacillus anthracis str.
           Sterne]
 gi|164713390|gb|EDR18915.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512057|gb|EDR87435.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529681|gb|EDR92430.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128129|gb|EDS96999.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670358|gb|EDT21098.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082281|gb|EDT67347.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561781|gb|EDV15751.1| putative methionyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006250|gb|ACP15993.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229266719|gb|ACQ48356.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
          Length = 544

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 240/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDCYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+    
Sbjct: 302 PAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLIVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|240116915|ref|ZP_04730977.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 700

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 198

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGGETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 379 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 549

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 550 KYEHLMQRM 558


>gi|240081768|ref|ZP_04726311.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268597867|ref|ZP_06132034.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268551655|gb|EEZ46674.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 700

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 198

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +     +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 379 MRYYIAAKLNGKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 549

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 550 KYEHLMQR 557


>gi|156549927|ref|XP_001602511.1| PREDICTED: similar to ENSANGP00000010004 [Nasonia vitripennis]
          Length = 968

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 120/547 (21%), Positives = 228/547 (41%), Gaps = 41/547 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  + + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+ +GTDE+G     
Sbjct: 260 KGEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYISGTDEYGTATEA 319

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +   D+      D+     I +D F RTT     +  + ++ +I ++G I 
Sbjct: 320 KALEEKLTPQQICDKFFDIHNDIYRWFSIGFDYFGRTTTPEQTEIVQAMFLRIKEQGYIL 379

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                     + E +              Y+ A G   +   + V   E      ++ + 
Sbjct: 380 PKTVDQLLCEKCERFLADRFVEGTCPRCKYEDARGDQCDGCGHLVNATELINPRCKVCST 439

Query: 173 QDKL----------------LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +  +                L  + +  E       R     +++ GLK   ++R    W
Sbjct: 440 KPVIKASTQFFLDLPKIQEGLKQWATEAEGGWSSVARAVTKPWLRDGLKPRCITRD-LKW 498

Query: 217 GIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFH 271
           GI +P D     + YVW DA   YL+ T           K    D+     + KD + FH
Sbjct: 499 GIPVPLDGYRDKVFYVWFDAPLGYLSITKKYTKEFEKWWKPNGVDVSLYQFMAKDNVPFH 558

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           AI +PA LL+A     L + + +  ++ ++  K SKS G  +   +  +  +  D  R++
Sbjct: 559 AIMFPATLLAADQGHTLVRHIMATEYLNYEDTKFSKSRGIGVFGTDARDTGIPADVWRFY 618

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L        D  ++   L  + N++L N +GN V+R++    K+++  IP      E D 
Sbjct: 619 LAYIRPETMDSNFNWVDLATKNNSELLNNLGNFVNRALMFAEKNFNSKIP-EMELLEDDL 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
            +L++  R L      ++   +  +L  ++++    ++Y  +Q+PW   K    +  + +
Sbjct: 678 HVLALVQRELTSYITLLEQARLRDSLRHILAISKHGNQYMQSQQPWVKVKGSEEDKKKGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTF 503
           TV+ V   +   L+ LL  F+P  A ++   L +  +N  +  + L   L  G  + K  
Sbjct: 738 TVIGVCCNLACLLSALLAPFMPNTARELRAQLGLPKQNYGYIPEVLSIMLPAGHSIGKP- 796

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 797 SPLFTKI 803


>gi|321250978|ref|XP_003191915.1| methionine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458383|gb|ADV20128.1| Methionine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 582

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 169/495 (34%), Positives = 255/495 (51%), Gaps = 19/495 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAA 62
           +  Y++T I Y NA PHIGH + +++ DVLARF RL      V+F TGTDEHG KI +AA
Sbjct: 51  KPFYVTTPIFYVNASPHIGHLHSLLLTDVLARFSRLRCPQRKVVFATGTDEHGLKIQQAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GV  + F D  S+ FR++A + + S  DFIRTTE RH       W  +   GDIYKG
Sbjct: 111 KANGVGEQEFCDDVSQRFRNLAKLANASNTDFIRTTEPRHVKAVEQFWNTLVGSGDIYKG 170

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            +SGWYS+ DE++Y   +V K  +          N V W EE  + FRL  +++ L  + 
Sbjct: 171 THSGWYSISDESFYAASQVTKRPEDGKMIAIETGNEVIWEEETNWKFRLGKHKEFLEKWL 230

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                      R + +          +S       W I +P DP+  +YVW+DAL NY+T
Sbjct: 231 SQPESVHPNTVRLDLLRQTSSLEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     +   WPAD+HV+GKDI++FHA++WP+ L SA+L  PK++ +H       
Sbjct: 291 VLGYPDWQGKGERVGWPADVHVVGKDIIKFHALHWPSLLHSASLAAPKRIIAHAHWTMSH 350

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANGIG 359
            K+SKS GNV+DPI  + + G D +R++L+R       D  Y+     +     LA+ +G
Sbjct: 351 AKMSKSRGNVVDPIAAMTQWGEDGVRWYLMRIGGGLVDDADYNPAE-VEVQYRLLADQMG 409

Query: 360 NLVSRS-----VSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRA 413
           NL+SR      +    +++D      G    + DE +  + + + +E    M+   + +A
Sbjct: 410 NLLSRISGAKLLKKAKREFDWGDEKTGEKGKDRDEELDRMMAGMREEFEGKMEVFGVSQA 469

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLAN 471
              V+ ++   ++ F +  PW      P   S+V  +T     +R  AILLQ  +P  A 
Sbjct: 470 CGGVMDVIMATNKLFTSLAPWS-----PSTPSSVPALTYAYHALRLSAILLQPIIPAKAE 524

Query: 472 KIFDILFVADENRCF 486
           +  D L V  E R +
Sbjct: 525 EALDRLGVPAEERSW 539


>gi|317165158|gb|ADV08699.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 719

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 38  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 98  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 217

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 277

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 278 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 337

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 338 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 397

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 398 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 457

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 458 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 512

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 513 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 568

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 569 KYEHLMQRM 577


>gi|49619159|gb|AAT68164.1| methionine-tRNA synthetase [Danio rerio]
          Length = 913

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 119/552 (21%), Positives = 230/552 (41%), Gaps = 47/552 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G ++L+  GTDE+G     
Sbjct: 259 EGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATEN 318

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+       +     I +D F RTT +   +  + ++ ++ ++G + 
Sbjct: 319 KAREEGLTPQQICDKYRCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLL 378

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY--------YNAQHNPVQWMEEEGYFF----- 167
           +           + +  D  V                 +    P+  +E +         
Sbjct: 379 EDTVEQLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCGRPINAVELKNPQCKVCKE 438

Query: 168 ----RLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTF 214
               R S +    L   E   E  L                  S+++ GLK   ++R   
Sbjct: 439 TPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD-L 497

Query: 215 DWGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P     + + YVW DA   YL+ T    +      K  P  +   + + KD + 
Sbjct: 498 KWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWERWWKN-PQQVELYNFMAKDNVP 556

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 557 FHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWR 616

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+     G+D  +    +  + N++L N +GN ++R+   + K ++G +P      + 
Sbjct: 617 FYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFEGCVP-EMLLNDD 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D+ +++     L++  + +    I  AL  ++++    ++Y    +PW+  K   +   R
Sbjct: 676 DKRLIAQVCWELKQYIQLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAEDRCR 735

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR----LKPGFM 498
           A TV  V+V V   LA +L+ F+P ++  I   L   +  +R   S        L  G  
Sbjct: 736 AGTVTGVSVNVACLLAAVLEPFMPTVSLSIRSQLQAPESSSRAMLSGPGAFICTLPAGHR 795

Query: 499 LHKTFDPIFPRF 510
           +  T  P+F + 
Sbjct: 796 IG-TVSPLFQKL 806


>gi|21428760|gb|AAM50099.1| AT05114p [Drosophila melanogaster]
          Length = 1012

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 218/550 (39%), Gaps = 50/550 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    +++K GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P +   + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K++      PG  T  
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF--SSTVPGVITTQ 668

Query: 387 DES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
           DE  +L++ +R L+    +M+   +   +  ++++    + Y  +Q+PW L K   D   
Sbjct: 669 DELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKT 728

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLH 500
           RAST++ + V +   LA LL  ++P  A  +F  L         +   +   L  G  + 
Sbjct: 729 RASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLPAGHQIG 788

Query: 501 KTFDPIFPRF 510
           K   P+F + 
Sbjct: 789 KPA-PLFAKL 797


>gi|24655311|ref|NP_611382.1| CG15100 [Drosophila melanogaster]
 gi|21627004|gb|AAF57625.2| CG15100 [Drosophila melanogaster]
          Length = 1022

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 218/550 (39%), Gaps = 50/550 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    +++K GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKEGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P +   + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K++      PG  T  
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNF--SSTVPGVITTQ 668

Query: 387 DES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--- 442
           DE  +L++ +R L+    +M+   +   +  ++++    + Y  +Q+PW L K   D   
Sbjct: 669 DELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKT 728

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLH 500
           RAST++ + V +   LA LL  ++P  A  +F  L         +   +   L  G  + 
Sbjct: 729 RASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLPAGHQIG 788

Query: 501 KTFDPIFPRF 510
           K   P+F + 
Sbjct: 789 KPA-PLFAKL 797


>gi|326519270|dbj|BAJ96634.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 594

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 112/532 (21%), Positives = 219/532 (41%), Gaps = 46/532 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G +VL+  GTDE+G    
Sbjct: 10  VAGRRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGHNVLYVCGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G +     D+     +++ +  +I++D F RT+  +  + C+ ++ K+ D   +
Sbjct: 70  NRALEEGCSPLQICDKYHAIHKEVYEWFNINFDHFGRTSTPQQTEICQSIFSKLLDNNWL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG-- 164
            +      Y    + +  D  V              +G          N  + ++     
Sbjct: 130 SENTMQQLYCESCQRFLADRFVVGSCPVEGCGNDTARGDQCDRCGRLLNSTELIDPRCKV 189

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSR 211
                  R + +    L   +   E                     +++K GLK   ++R
Sbjct: 190 CEGIPIVRDTDHLFLELPLLKEQLEKYIDEASATGSWSQNAVRITNAWLKEGLKPRCITR 249

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 250 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITA-CYTPEWEKWWKNPENVELYQFMGKD 307

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVD 323
            + FH + +P+ LL         K +    ++ ++  K SK+ G  +   +     +  D
Sbjct: 308 NVPFHTVMFPSALLGTGENWTLMKNISVTEYLNYESGKFSKTKGIGVFGNDAKATNIPAD 367

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +  +GL+ + N +L N +GN + R +S I K     Y  +IP 
Sbjct: 368 VWRYYLLSNRPEASDAVFTWEGLQIKHNNELINNLGNFIYRVLSFIAKPEGAGYGSIIPE 427

Query: 380 --PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                     +S+      ++++  + M    + + L   +++ SE + Y    + W+L 
Sbjct: 428 APNANTHPLSQSLAETVGNLIEQYIDAMDKVKLKQGLKIAMAISSEGNAYLQESQFWKLY 487

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
           K +P   +TV+  +  ++  LA LL+ F+P  +  +   L +   E+  F  
Sbjct: 488 KQDPASCATVMKTSAGLVYLLACLLEPFMPSFSKDVLQQLNLCPKEHISFAD 539


>gi|268595679|ref|ZP_06129846.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268549068|gb|EEZ44486.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 700

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 198

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 379 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 549

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 550 KYEHLMQRM 558


>gi|240120254|ref|ZP_04733216.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 700

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 127/549 (23%), Positives = 221/549 (40%), Gaps = 52/549 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 198

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ AD      H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G +      
Sbjct: 379 MRYYIAAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +          + R   G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRKTLGGHPIN 549

Query: 502 TFDPIFPRF 510
            ++ +  R 
Sbjct: 550 KYEHLMQRM 558


>gi|301056527|ref|YP_003794738.1| methionine--tRNA ligase [Bacillus anthracis CI]
 gi|300378696|gb|ADK07600.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 544

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEEIGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|221119548|ref|XP_002161815.1| PREDICTED: similar to MGC69150 protein [Hydra magnipapillata]
          Length = 1410

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 115/544 (21%), Positives = 230/544 (42%), Gaps = 42/544 (7%)

Query: 5    EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            + + I++A+ Y N  PH+G+     + ADV AR+ RL  L+VL+  GTDE+G      A 
Sbjct: 761  KNILITSALPYVNNVPHLGNIIGCTLSADVYARYCRLRNLNVLYICGTDEYGTATETKAF 820

Query: 64   NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            + G+T +   D+ ++   ++    +I +D F RTT +      + ++ KI + G + K  
Sbjct: 821  SEGLTPQQICDKYNKIHSEIYTWFNIEFDCFGRTTTEHQTKITQDIFWKIENNGYLCKDA 880

Query: 124  YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSA- 171
                   + E +  D  V            +G          N  +  +        S  
Sbjct: 881  VDQLKCEQCERFLADRFVEGICPFCSYEDARGDQCDACGKLINATELKKPRCKQCGSSPV 940

Query: 172  -------------YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                          +  L  +     +    +  +N    ++  GLK   ++R    WG 
Sbjct: 941  IKSSDHIFLDLPKIEPMLKDWIMKSEKANWTVNAKNITRGWIAEGLKPRCITRD-LKWGT 999

Query: 219  KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAI 273
             +P +     + YVW DA   Y++ T    +      K  P     +  + KD + FH +
Sbjct: 1000 PVPMEGYTDKVFYVWFDAPIGYISITANYTDQWEKWWKN-PEQVTLVQFMAKDNVPFHTV 1058

Query: 274  YWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLV 330
             +P+ LL+A  N  +  ++ +  ++ ++ +K SKS G  +         +  D  R++L+
Sbjct: 1059 VFPSSLLAAKDNYTILNEISATEYLNYENDKFSKSRGVGVFGDHAESTGIPADMFRFYLL 1118

Query: 331  REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  +D F+  D    + N++L N +GN V+R++  +   ++  +P        D  +
Sbjct: 1119 YIRPESQDSFFQWDDFITKNNSELLNNLGNFVNRALMFLKNSFNSTLPNL-QLQCEDYKL 1177

Query: 391  LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTV 447
            ++  +R L +  E++    +   L  ++++    ++Y  A KPW L K +     RA+TV
Sbjct: 1178 IAGINRDLHQYIEHLDAIKLKDGLRCILNMSRLGNQYMQAHKPWVLIKGDEQEQMRAATV 1237

Query: 448  LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPGFMLHKTFDPI 506
            + + V V   +A+L+  ++P ++ ++   L +  +      +    L  G  +  T  P+
Sbjct: 1238 VGLAVNVSALIAVLILPYMPLVSKQLQLQLDLPSDFLIVPDNFVPMLPEGHKIG-TPAPL 1296

Query: 507  FPRF 510
            F + 
Sbjct: 1297 FQKI 1300


>gi|297849444|ref|XP_002892603.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338445|gb|EFH68862.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 583

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 117/557 (21%), Positives = 224/557 (40%), Gaps = 53/557 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G    
Sbjct: 10  ISGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+     +++ D  DIS+D F RT+  +H   C+ ++ K+ +   I
Sbjct: 70  TKALEENRTPREICDKYHAIHKEVYDWFDISFDQFGRTSTPQHTQVCQEIFNKLWENKLI 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
            +      Y      +  D  V            +G   +      NP + +        
Sbjct: 130 SENTIQQLYCDTCNKFLADRLVEGSCPLCNYDSARGDQCESCGKLLNPTELIAPRCKVCQ 189

Query: 165 --YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +    L   ++  E                     ++++ GL+   ++R  
Sbjct: 190 TTPEIRDTDHLFIDLPKLKAQLEAYINGTSVRGSWSRNAVQTTNAWIREGLQQRCITRD- 248

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T    +      K  P +      +GKD +
Sbjct: 249 LKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEQWWKN-PKNAELYQFMGKDNV 307

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+  L         K V    ++ ++G K SKS G  +   +V +  + V+  
Sbjct: 308 PFHTVMFPSTQLGTGENWTLMKTVSVTEYLTYQGGKFSKSKGVGLFGNDVKDTNIPVEVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAF 383
           RY+L+       D  ++ + L+ ++N +L   +GN V+R VS I K  +       P A 
Sbjct: 368 RYYLLINRPEVSDTSFEWEDLQAKLNDELLKNLGNFVNRVVSFIAKPENIGYGSIIPDAP 427

Query: 384 TESDESIL----SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                 +         ++++E  E M+   + + L   + +  E + Y    + W+L K 
Sbjct: 428 GAESHQLTMSLSEKVGKLVEEYVEAMEKVKLKQGLKTAMLISGEGNAYLQTSEFWKLYKE 487

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---------ENRCFQSLD 490
           +    + V+     ++  LA LL+ F+P  ++++F  L +           E        
Sbjct: 488 DKPSCAIVVRSAAGLVHLLARLLEPFMPSFSHEVFKQLNLPPHFSLSDERAEVLQASRPW 547

Query: 491 QRLKPGFMLHKTFDPIF 507
           + L P   +  T  P+F
Sbjct: 548 EILPPSHRIG-TPQPLF 563


>gi|328783339|ref|XP_001120625.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial [Apis
           mellifera]
          Length = 645

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 169/500 (33%), Positives = 280/500 (56%), Gaps = 21/500 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + +YI+T I Y NA PHIGH Y  ++AD +ARF+ + G  V  +TGTDEHG K+ KAA  
Sbjct: 122 KNIYITTPIFYVNAGPHIGHLYTAVLADTIARFNAMLGHSVFLSTGTDEHGTKVQKAANK 181

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A ++T  +  Q S  F++M D+  + Y  FIRTTE++H +     W  +   G IY+G Y
Sbjct: 182 AILSTFEYCTQISHQFQEMCDIFQVKYSKFIRTTEEQHQNAVLHFWNCLEKNGHIYRGKY 241

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------YYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           SGWY++ +E + +D E+ +                 + ++WMEE+ Y FRL++++D+L  
Sbjct: 242 SGWYNISEETFISDKEIIEKNFKNIKIKKGCIIESGDTIEWMEEDSYKFRLTSFKDQLKY 301

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
           + ++       I R  +++      L+DLS+SR      W I  P D  + +YVW+DAL 
Sbjct: 302 WLKNENVIEPAIYR--KILIPWLEELQDLSISRPISRVPWAIPTPSDKSHTIYVWLDALV 359

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NYLT+ GY   P+ S  +FWP  + +IGKDIL+FH IYWPAFL++A L  PKK+  HG  
Sbjct: 360 NYLTSVGY---PNNSFKEFWPPTVQIIGKDILKFHGIYWPAFLMAAGLEPPKKLICHGHW 416

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             K +K+SKS GNVI P   + +   D LRYFL+R+     D  Y+K  ++K +N++LA+
Sbjct: 417 AVKDKKMSKSKGNVISPFIAMNDFTQDGLRYFLLRQAILDTDANYNKSKVRKILNSELAD 476

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI----LSVCSRVLQEIRENMQNQLIHR 412
            +GNLV+R     +     +  +    +  +  +    + +   + +E R+  +   ++ 
Sbjct: 477 TLGNLVNRCFGKTINPDGIIYNSIEYKSILNSELAVKNIKILENLSEEARKCYEKSDLYH 536

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPK 468
            +  V+ ++   ++ F   +PW L K+       +   V+ + +E +R  A++L   +P+
Sbjct: 537 VVDHVMDMLRSANQVFAYYEPWNLSKSKDLNSEKQVEAVISLILENLRVAALVLYPIIPQ 596

Query: 469 LANKIFDILFVADENRCFQS 488
           L++ + D L V+ +NR ++ 
Sbjct: 597 LSSNLLDFLQVSIKNRNWED 616


>gi|281207432|gb|EFA81615.1| methionyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 732

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 117/539 (21%), Positives = 220/539 (40%), Gaps = 37/539 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++  DV AR+ R+ G + ++  GTDE+G    
Sbjct: 15  VEGQRNILITSALPYVNNVPHLGNIIGCVLSGDVYARYCRMRGYNTIYICGTDEYGTATE 74

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT K   D+     RD+    +I +D F RT+     +  + ++ K+      
Sbjct: 75  TKALQEGVTPKEICDRYHVIHRDIYKWFNIGFDKFGRTSTDSQTEIAQDIFMKLYKNELT 134

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
                   Y  R   +  D  V            +G          NP   +        
Sbjct: 135 TSEEIEQLYCERCNMFLADRYVEGTCPHCQFEDARGDQCDNCTKMLNPTDLIRPRCKLDS 194

Query: 165 ---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    + F       + L  + +    I     +    S+VK  LK   ++R    
Sbjct: 195 TTPVLKSTKHIFLSLPKIQQRLDDFVTQSSPIWSENSQRITNSWVKGELKSRCITRD-LK 253

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRF 270
           WG  +P +   + + YVW DA   YL+ T           K  P +   +  +GKD + F
Sbjct: 254 WGTPVPLEEFKEKVFYVWFDAPIGYLSITKEYTEQWEQWWKN-PKNVELVQFMGKDNVPF 312

Query: 271 HAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALRY 327
           H + +P+ L+ +     L   + +  ++ ++  K SKS    +     +   V  D  RY
Sbjct: 313 HTVIFPSSLIGSGDQYTLLHNLSTTEYLNYESGKFSKSRNTGVFGDNAMGTGVPADIWRY 372

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L+       D  +       + N +L +  GNLV+R +  +  D +G+IP      + D
Sbjct: 373 YLLSNRPEKIDSTFSWADFGLKTNTELLSNFGNLVNRVLKQVSSDLNGVIPKI-ELNDED 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              ++   ++  E   ++++  I   L   +S+    ++Y  + KPWELK+ +P R  T+
Sbjct: 432 RQFIADVDKLYIEYLNDLEHVHIKDGLRTAMSMSKLGNQYMQSNKPWELKEKDPLRFGTI 491

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           L V V  I+ LA + + ++P++  K+ + L +        + +  +  G  + K   P+
Sbjct: 492 LTVLVNTIKLLATVFEPYLPEITAKVHEQLNMQPTKYSV-NFEFLITEGHAISKNIVPL 549


>gi|228942204|ref|ZP_04104744.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975133|ref|ZP_04135692.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981772|ref|ZP_04142067.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228777884|gb|EEM26156.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228784654|gb|EEM32674.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817538|gb|EEM63623.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942856|gb|AEA18752.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 544

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 235/538 (43%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTF-DWGIKI 220
             +Y +   F                 R N +     +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQEQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRAVSRDLPIGVSIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
                  ++VWI+A+  Y + +  + +       +FW +D    +V GKD + FH++ WP
Sbjct: 243 KGYEDKKIHVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFHSVIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG +P        D  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGTVPKGT----IDIELKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++   L +   N          +P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRSTLSIIKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|118480122|ref|YP_897273.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196047520|ref|ZP_03114730.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225867021|ref|YP_002752399.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|187645699|sp|A0RKM3|SYM1_BACAH RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|254782850|sp|C1EYD5|SYM_BACC3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118419347|gb|ABK87766.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196021634|gb|EDX60331.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225787890|gb|ACO28107.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
          Length = 544

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPTRIDSVKPLFERI 527


>gi|158297351|ref|XP_317601.4| AGAP007891-PA [Anopheles gambiae str. PEST]
 gi|157015154|gb|EAA12906.4| AGAP007891-PA [Anopheles gambiae str. PEST]
          Length = 977

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 117/552 (21%), Positives = 214/552 (38%), Gaps = 47/552 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   I++A+ Y N  PH+G+    ++ AD+ AR+ RL G + L+  GTDE+G      
Sbjct: 257 GQKNNLITSALPYVNNVPHLGNIVGCVLSADIFARYSRLCGYNTLYIGGTDEYGTATETK 316

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T +   D+       +     I +D F RTT        + ++K++   G I  
Sbjct: 317 ALAENMTPRQICDKYFDIHNSIYRWFGIGFDYFGRTTTAEQTRIVQDIFKELYASGYIET 376

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                    + + Y  D  V              +G          N V+ +        
Sbjct: 377 RSVEQLLCQKCDRYLADRFVEGTCPHPGCGYEDARGDQCDGCGKLVNAVELLRPRCKMCN 436

Query: 169 LS-------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            S                +  L  +    E       R    +++K GLK   ++R    
Sbjct: 437 TSPVIRESSQFFLDLPKIEPTLREWVDRSEGGWTHNARVITRAWLKEGLKSRCITRD-LK 495

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKD 266
           WGI +P +   + + YVW DA   Y++ T           +   A+          + KD
Sbjct: 496 WGIPVPLEGYEKKVFYVWFDAPIGYISITSRYCKEWKQWWQPDTANTGVKVDLYQFMAKD 555

Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FH++ +PA LL       L   V +  ++ ++  K SKS G  +   +  +  +  D
Sbjct: 556 NVPFHSVMFPASLLAVDKGYTLVSHVMATEYLNYEDGKFSKSRGIGVFGNDAQDTGIPAD 615

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L      G+D  +    L+ R N++L   +GN  +R++    K +D  IP P   
Sbjct: 616 VWRFYLGAARPEGQDSSFSWSDLQARNNSELLKNLGNFFNRALVFCEKFFDSTIP-PMTL 674

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TN 440
            E D ++L++ +R L+     M+   +   +  ++ +    ++   +++PW   K     
Sbjct: 675 LEEDYTLLALINRELKGYVNQMEKARMRDGIRHLLQISRYGNQLMQSEEPWVKVKGTDDQ 734

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFM 498
             RA TV+ +       LA L+  F+P  A  ++  L V     N     +   L  G  
Sbjct: 735 KARAGTVIGLCCNFACLLATLIFPFMPTTARNMYSQLNVRGGFINSDKPLIRTLLPTGHR 794

Query: 499 LHKTFDPIFPRF 510
           + K    +F + 
Sbjct: 795 IGKPA-VLFTKI 805


>gi|268685620|ref|ZP_06152482.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268625904|gb|EEZ58304.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 684

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGGETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|309787976|ref|ZP_07682585.1| methionyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924110|gb|EFP69608.1| methionyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 652

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 128/522 (24%), Positives = 229/522 (43%), Gaps = 48/522 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I ADV  R+ R+ G +V F    D HG  I   AQ  G+T +  + + S+  +   
Sbjct: 1   MLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141
              +ISYD++  T  + +     +++ ++ + G I     S  Y      +  D  V   
Sbjct: 61  AGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGT 120

Query: 142 --------YKGADGQYYNAQHNPVQWMEE--------------EGYFFRLSAYQDKLLSY 179
                     G + +   A ++P + +E               E +FF L ++ + L ++
Sbjct: 121 CPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  +  N++  + +SGL+   +SR    +G +IP+ P    YVW+DA   Y+
Sbjct: 181 TRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
            +   L +  G      ++W  D      H IGKDI+ FH+++WPA L  +N   P  +F
Sbjct: 238 GSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLF 297

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRV 350
            HG++     K+SKS G  I     +     D+LRY+   +++    D   + +   +RV
Sbjct: 298 VHGYVTVNSAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRV 357

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           NAD+ N + NL SR+   I K +DG++    A   +D  +    +   + I E  +++  
Sbjct: 358 NADIVNKVVNLASRNAGFINKRFDGVL----ASELADPELYKTFTDAAEVIGEAWESREF 413

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPK 468
            +A+ ++++L    +RY D Q PW + K          +  + + + R L   L+  +PK
Sbjct: 414 GKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPK 473

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L  +    L        +  + Q L  G  ++  F  ++ R 
Sbjct: 474 LTERAEAFLNTE---LTWDGIQQPLL-GHKVN-PFKALYNRI 510


>gi|52550379|gb|AAU84228.1| methionyl-tRNA synthetase [uncultured archaeon GZfos3D4]
          Length = 541

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 138/542 (25%), Positives = 243/542 (44%), Gaps = 47/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + +++A+ Y N + HIGH    + AD+  R  R  G DV+F +G+D HG  I  +A+ 
Sbjct: 7   KPVLVTSALPYVNGECHIGHLRTYVPADIYVRMLRKMGYDVIFISGSDTHGTPIVLSAEA 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V +   +F+ M   L++++D + RT  + +H     + KK+ + G ++K   
Sbjct: 67  QGITPEEVVKKYHEHFKRMFQALNVNFDYYGRTDSESNHRRTTEIVKKLIENGYVHKKET 126

Query: 125 SGWYSLRDEAYYNDDEVYKGA-----------DGQYYNAQHNPVQWMEE----------- 162
              +      +  D  V                 Q       P + +E            
Sbjct: 127 KQAFCNTCGRFLPDRYVEGKCPYCGAVARGDECDQGCGKHLEPGEIIEPRCKLCGSKADF 186

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF LS++ D L++Y          +  RN    +VK  L+D  ++R   +WG+K
Sbjct: 187 KQQEHFFFNLSSFADFLIAYL---DNIGGTLNARNYAKEWVKKELRDWCVTR-NLEWGVK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY---LDNPDGSKAKFWPAD----LHVIGKDILRFHA 272
            P   + ++YVW+DA   Y++ T         +    K+W  +    +H IG DI+  H 
Sbjct: 243 FPGRDELVVYVWVDAPIGYISFTEELLNYTTDENDWRKYWKGNEATIVHFIGTDIIYHHC 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           I+WPA L  A   LP  V + G +   G   SKS GNVI   E +E    D LRY+LV +
Sbjct: 303 IFWPAMLKGAGYSLPDAVVASGMVKINGGTFSKSRGNVIWVKEFLERFHPDTLRYYLVAQ 362

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +  K+  +  D    RVN +L   +GNLV R VS   K++  +        + DE + +
Sbjct: 363 SSHTKELNFSWDSFSMRVNNELVAILGNLVHRVVSFAYKNFRVVP-----EGDVDEDVFA 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRASTVLY 449
             +R  QE+   ++     + +   + L    + +F  ++PW L K      +R   ++ 
Sbjct: 418 AIARTKQEMISAVEEYEFKKLVDSAMKLADFGNSFFQREEPWHLIKKGDAGRERCGEIVR 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIF 507
             +++I+ + I L+A +P    +++  L +  +  +     +   +K G  L K    +F
Sbjct: 478 NVLQLIKAVCIGLEAVMPAKMAEVWSQLGMESDVHSVNLDEMMVPIKSGQPL-KKPKRLF 536

Query: 508 PR 509
            R
Sbjct: 537 DR 538


>gi|196033059|ref|ZP_03100472.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218906235|ref|YP_002454069.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|226695272|sp|B7JEJ3|SYM_BACC0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|195994488|gb|EDX58443.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218535969|gb|ACK88367.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 544

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 238/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F                 R N +     +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+    
Sbjct: 302 PAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLIVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|34785759|gb|AAH57463.1| Mars protein [Danio rerio]
          Length = 913

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 120/552 (21%), Positives = 230/552 (41%), Gaps = 47/552 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G ++L+  GTDE+G     
Sbjct: 259 EGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTDEYGTATEN 318

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+       +     I +D F RTT +   +  + ++ ++ ++G + 
Sbjct: 319 KAREEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERGFLL 378

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +           + +  D  V            +G          N V+    +      
Sbjct: 379 EDTVEQLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCGRLINAVELKNPQCKVCKE 438

Query: 165 -YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTF 214
               R S +    L   E   E  L                  S+++ GLK   ++R   
Sbjct: 439 TPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRD-L 497

Query: 215 DWGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P     + + YVW DA   YL+ T    +      K  P  +   + + KD + 
Sbjct: 498 KWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWERWWKN-PQQVELYNFMAKDNVP 556

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 557 FHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWR 616

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+     G+D  +    +  + N++L N +GN ++R+   + K ++G +P      + 
Sbjct: 617 FYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVSKFFEGCVP-EMLLNDD 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D+ +++     L++  + +    I  AL  ++++    ++Y    +PW+  K   +   R
Sbjct: 676 DKRLIAQVCWELKQYIQLLDKVRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAEDRCR 735

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR----LKPGFM 498
           A TV  V+V V   LA +L+ F+P ++  I   L   +  +R   S        L  G  
Sbjct: 736 AGTVTGVSVNVACLLAAVLEPFMPTVSLSIRSQLQAPESSSRAMLSGPGAFICTLPAGHR 795

Query: 499 LHKTFDPIFPRF 510
           +  T  P+F + 
Sbjct: 796 IG-TVSPLFQKL 806


>gi|326562649|gb|EGE12951.1| methionyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 683

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 121/545 (22%), Positives = 218/545 (40%), Gaps = 43/545 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R  +    +V +    D HG  I  
Sbjct: 1   MTTSRKILVTSALPYANGPIHLGHLVEYIQTDIWVRAMKAMRHNVTYVCADDAHGTAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ+ G+T +  +     +         I +D++  T    +    + ++  +   G I+
Sbjct: 61  KAQDNGITPEEQIATVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                  +      +  D  V             G + +  ++ +N  +           
Sbjct: 121 TKDVEQLFDTEKGLFLADRFVKGTCPECDAPNQYGDNCEVCSSTYNATELKNPYSTLSNS 180

Query: 170 SAY------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S              Q        +  +  L     N++  +  +GL    +SR    +G
Sbjct: 181 SPIIRSSKHYFFNLPQFDEFLRTWTKSQGRLQSSIYNKLSEWFDAGLAPWDISRDAPYFG 240

Query: 218 IKIPDD----PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
            KIPD     P    YVW+DA   Y+ +     D  D    +++  D      H IGKDI
Sbjct: 241 FKIPDTPADEPDKYFYVWLDAPVGYMASFKNLCDRTDMDFDEYFNKDSQTELYHFIGKDI 300

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FH+++WPA L  A    P  V +HGF+   GEK+SKS G  I     +  +  + LRY
Sbjct: 301 VYFHSLFWPAMLEGAGYRTPTAVNAHGFLTVNGEKMSKSRGTFIKAETYLTHLDPEYLRY 360

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   +++   +D   D +   ++VN+DL   + N+ SRS   I K++DG +        +
Sbjct: 361 YFASKLSANVEDINLDLEDFMQKVNSDLVGKVVNIASRSAGFIHKNHDGKLSD----ELT 416

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRAS 445
           +  ++        EI    + +   +    +++   + + Y D QKPW L K    D   
Sbjct: 417 EPKLIDEIICAGDEIAAAYEAREFAKVTRLIMACADKANEYIDTQKPWALNKAGKFDEVQ 476

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V  V++ +  +L I L   +PKL+ +  + L +  ++  F +  + L    +    F P
Sbjct: 477 KVCTVSLNIFHKLIIYLTPILPKLSEQAREFLNI--DSLEFDTRHRHLLSHHI--NPFIP 532

Query: 506 IFPRF 510
           +  R 
Sbjct: 533 LMQRI 537


>gi|309808504|ref|ZP_07702403.1| methionine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168332|gb|EFO70451.1| methionine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 547

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 160/409 (39%), Positives = 244/409 (59%), Gaps = 12/409 (2%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQYYNAQH---NPVQWMEEEGYF 166
           +  +GDIY G Y GWYS+ DE Y+ +    EVYK   G+    +    + V+ ++E  YF
Sbjct: 1   MLKQGDIYLGEYQGWYSVEDEEYFTESQLAEVYKDDSGKVIGGKAPSGHEVKLIKEPSYF 60

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQ 225
           FR+S Y D+LL YY+ +P+FILP  R  E+I+   K GL+DLS++R T DWGI +P DP+
Sbjct: 61  FRMSKYADRLLEYYKENPQFILPNSREKEMINNFIKPGLEDLSVTRTTVDWGIPVPSDPK 120

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           +++YVWIDAL+NY++  GY    D    K+WPAD+H++GK+I+RFH IYWP  L++ +LP
Sbjct: 121 HVVYVWIDALSNYISALGYSSEDDSLFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLP 180

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           LPK++F HG++L K  K+SKS GN + P  ++   G+DALRY+L+R I  G DG +  + 
Sbjct: 181 LPKQIFGHGWVLMKDGKMSKSKGNAVYPEMIVNRYGLDALRYYLMRAIPFGSDGIFTPED 240

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIREN 404
             +RVN DLAN +GNL++R++SMI +  DG + P      E  + +  + +  +    E 
Sbjct: 241 FVERVNFDLANDLGNLLNRTISMINQYQDGLVDPVSTTEDEYGKQLKELANHTINLYHEQ 300

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQ 463
           M      +AL  +  L+S  ++Y D   PW L K    D    V+    E +R +A+L++
Sbjct: 301 MDALHFSKALDTIWGLISRANKYIDETTPWVLNKEGKVDELKCVMSNLAESLRLIALLIR 360

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM--LHKTFDPIFPRF 510
             + +    IF+ L ++ ++    SL      G+   + K   PIFPR 
Sbjct: 361 PIMTQSPVHIFEQLGLSLDDANAASLCWGAY-GWKNYVTKNPKPIFPRL 408


>gi|302339380|ref|YP_003804586.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636565|gb|ADK81992.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 736

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 120/541 (22%), Positives = 236/541 (43%), Gaps = 44/541 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I++A+ Y N  PH+G+  +++ ADV +RF RL G + L+  GTDE+G      A 
Sbjct: 2   KKKRLITSALPYVNNIPHLGNLIQVLSADVFSRFCRLKGYETLYVCGTDEYGTATETRAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ K   D+  +   ++    +I++D F RT+ +   D  + ++KK+   G I +  
Sbjct: 62  EEGVSPKELCDRYYKIHSEIYSWFNIAFDHFGRTSTQWQTDIVQDIFKKVDAAGYITEQT 121

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
               Y    + +  D  V            +G   +      +P   ++           
Sbjct: 122 IEQLYCESCDRFLADRFVRGTCPHCGYEDARGDQCENCGKLLDPTDLIDPRCGLCGQTPK 181

Query: 167 FRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            R +++    L       E                     S+++ GLK+  ++R    WG
Sbjct: 182 LRSTSHLYLDLPKIRPRLEEWIDKASVEGFWARNAIQMTRSWIRDGLKERCITRD-LKWG 240

Query: 218 IKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
           I +P       + YVW DA   Y++ T  L +   +  K  P ++     IGKD + FH 
Sbjct: 241 IPVPKPGYEGKVFYVWFDAPIGYISITANLTDEWETWWKN-PDEVDLFQFIGKDNIPFHT 299

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P+ L+++         + S  ++ ++  K SKS G  +   +  +  +  D  R+++
Sbjct: 300 VIFPSSLIASGDNWTLLHHMSSTEYLNYESGKFSKSKGIGVFGTDARDTGIPADVWRFYI 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                   D  +     +++VN +L   +GNLV+R+++ + + YDG +P      +    
Sbjct: 360 FYNRPEKSDALFTWSDFQEKVNGELIGNLGNLVNRTLTFVSRFYDGKLPEAAIDADMAAW 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           I         EI E+ +   +  A  ++ +L S  ++ F   +PW+L+K NP+ A+T+L 
Sbjct: 420 IRER----EAEITEHFERAELRDAFRKIFALSSYGNKAFQEGEPWKLRKENPEAAATLLS 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             V ++R L +L++ F+P+ + ++     +      ++ L      G    +  + +F R
Sbjct: 476 TLVYLVRDLGVLVEPFIPETSGRMLSFFGIG--KADWEILGDF--KGISSIEKPEILFER 531

Query: 510 F 510
            
Sbjct: 532 L 532


>gi|77747705|ref|NP_779783.2| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|307578469|gb|ADN62438.1| methionyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 690

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 130/538 (24%), Positives = 210/538 (39%), Gaps = 43/538 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+
Sbjct: 5   LVTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGM 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F+     +        ++++D +  T    +       +  +   G I     + +
Sbjct: 65  PPEAFIATTQASHERDFAAFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 124

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QWMEE 162
           Y      +  D  V             G + +   A ++P               +  + 
Sbjct: 125 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 184

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF ++ +   L  +            +  E +   K GL+   +SR    +G KIPD
Sbjct: 185 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLD-AKGGLRPWDISRDAPYFGFKIPD 243

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L            ++       H IGKDI+ FHA++WP
Sbjct: 244 QPGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWP 303

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR-EIA 334
           A L       P ++  +G++   G K+SKS G  I         +  DALRY+       
Sbjct: 304 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSG 363

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVNADL   + NL SR  S I   ++G +    A T  D       
Sbjct: 364 DVDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDRF 419

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
              L  IR+  +      A+ Q + L  E ++Y D  KPW + K +    +   V    +
Sbjct: 420 VAALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQHHADAQLHAVCTQGL 479

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P  +  I    F+A     +Q ++Q L  G  + + + P+F R 
Sbjct: 480 NLFRVLITALKPILPHTS--IQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTRI 534


>gi|308470944|ref|XP_003097704.1| hypothetical protein CRE_14236 [Caenorhabditis remanei]
 gi|308239822|gb|EFO83774.1| hypothetical protein CRE_14236 [Caenorhabditis remanei]
          Length = 539

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 184/522 (35%), Positives = 275/522 (52%), Gaps = 35/522 (6%)

Query: 8   YISTAIAYPNA------------------QPHIGHAYEMIIADVLARFHRLDGLDVL--- 46
           ++++ I Y NA                  +PHIGHAY  ++ D   R++ L   +     
Sbjct: 14  FVTSPIFYANAGKVRSGYFATFPNLFSISEPHIGHAYTAVLCDTAYRWNVLKNSNNQNSD 73

Query: 47  ----FTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
               F+ GTDEHG KI +A+Q A  T K F DQ S  F ++ + L++S+  FIRTT+ +H
Sbjct: 74  SRALFSIGTDEHGSKIYQASQLAKKTPKEFCDQVSSKFSNLFENLNLSHTHFIRTTDSKH 133

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +  +  WK +S  G IYK  YSG+YS+ DE +  ++EV K  D         PV+W+EE
Sbjct: 134 SEAVQTFWKTLSSNGYIYKSSYSGYYSITDECFIPENEVEKRNDKMVLKTTSQPVEWIEE 193

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E Y FRLS +++K+  + E          +   + S        +S +R    WGI +PD
Sbjct: 194 ENYMFRLSEFREKVKEWIEKTDVVYPVKYKTLALDSLTMEDDLSISRTRSRLSWGIPVPD 253

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP   +YVW+DAL NYLT +GY       K   WP    +IGKDI +FH  YWPAFL++A
Sbjct: 254 DPSQTIYVWLDALVNYLTVSGYPQ-----KQFVWPPTCQIIGKDITKFHLFYWPAFLMAA 308

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           NL LPKKVF HG  L    K+SKSLGNV++P E +++   + LRYFL+++     D  + 
Sbjct: 309 NLSLPKKVFIHGHWLVDNVKMSKSLGNVVNPNETMDKFTSEGLRYFLLKQGNPSSDCSFS 368

Query: 343 KDGLKKRVNADLANGIGNLVSR-SVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQ 399
                + +N+D+ N +GNLV+R +V+ I K  +Y  +        E  E ++ +     +
Sbjct: 369 WSSCLEMINSDMVNNVGNLVNRSTVAKINKSGEYPKVESLESKVKEDTEKLMEMLEESYE 428

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  E     + ++ +  ++ ++ E +R F   +PW+  +TN +R  +VLYVT E IR ++
Sbjct: 429 KCIELYNEMMYYKVIEHLMLIMKEANRVFQLSQPWK--ETNSERLESVLYVTYETIRVVS 486

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           ILLQ   PK+A    D L V  E R           G  L K
Sbjct: 487 ILLQPITPKMAAFCLDRLGVKAEKRGLADAKIGCYSGGKLGK 528


>gi|195584739|ref|XP_002082162.1| GD25352 [Drosophila simulans]
 gi|194194171|gb|EDX07747.1| GD25352 [Drosophila simulans]
          Length = 1022

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 115/549 (20%), Positives = 218/549 (39%), Gaps = 48/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ R  G + L   GTDE+G      A 
Sbjct: 254 RNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKAL 313

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +   D+       +     I +D F RTT +   D  +  +K +   G I    
Sbjct: 314 AENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITES 373

Query: 124 YSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEG------ 164
                  + + +  D  V              +G          N  + +          
Sbjct: 374 VEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNTA 433

Query: 165 -------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                    F      +  L  +    E       +    +++K GLK   ++R    WG
Sbjct: 434 PVLRSSDQLFIDLPKAEPQLKDWVDKSEGGWTHNAKVITRAWLKEGLKPRCITRD-LKWG 492

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
           I +P +   + + YVW DA   Y++ T           +  PA          + KD + 
Sbjct: 493 IPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQ--PAKGTDVELFQFMAKDNVP 550

Query: 270 FHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ WP+    ++    L   + +  ++ ++  K SKS G  +   +  E  +  D  R
Sbjct: 551 FHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWR 610

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L      G+D  +  + L  R N++L N +GN V+R++    K++   +P     T+ 
Sbjct: 611 FYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVP-EVITTQD 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDR 443
           +  +L++ +R L+    +M+   +   +  ++++    + Y  +Q+PW L K       R
Sbjct: 670 ELVLLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQPWSLLKGTDDQKKR 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
           AST++ + V +   LA LL  ++P  A  +F  L         +   +   L  G ++ K
Sbjct: 730 ASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLPAGHIIGK 789

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 790 P-SPLFAKL 797


>gi|228930066|ref|ZP_04093076.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228829565|gb|EEM75192.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 544

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 238/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F                 R N +     +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWVEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+    
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLIVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|241667151|ref|ZP_04754729.1| methionyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875704|ref|ZP_05248414.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841725|gb|EET20139.1| methionyl-tRNA synthetase metG [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 673

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 129/542 (23%), Positives = 235/542 (43%), Gaps = 46/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G + +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNECIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V++ S N +      +I +D++  T    + +    ++ K++ +  I K   
Sbjct: 62  LGITPEELVEKYSNNHQKDFLSFEIEFDNYHSTHSPINKEIVEDIYGKLNAQKLISKKEI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE----------- 162
           +  Y    + +  D            E   G   +   A ++P + +             
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKTEDQYGDSCEVCGATYDPTELINPKSVVSGKAPIQ 181

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L + +  +  + ES+    L  E  N++  + + GL+   +SR    +G  
Sbjct: 182 KNSEHFFFDLPSLEKNIKDWIESNKL--LQPEVANKLAEWFEQGLQSWDISRDAPYFGFA 239

Query: 220 IP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
           IP  D Q   YVW+DA   Y+ +   Y D  +    +FW  +       H IGKDI+ FH
Sbjct: 240 IPGTDEQKFFYVWLDAPMGYIASFRDYCDKNNVDFNEFWGDNSCESELYHFIGKDIIYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV- 330
           A++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   
Sbjct: 300 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFAS 359

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           R  +   D   + +    + N+D+   + N+ SR    I K +D  +    A    D+ +
Sbjct: 360 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----ANEVLDKEL 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               ++  + I E  + +    A+  +++L  + +++ D  KPW+L K      +   V 
Sbjct: 416 EKEFAKSHRAITEAFEKREFAHAVRLIMTLADKANQFIDHHKPWQLAKEEGQEQKVHQVC 475

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + + L   L+  VP +       L +  E   ++     LK    ++K F P+  
Sbjct: 476 SQGINMFKVLVAYLKPIVPSIVKNAEIFLNI--ELSKWRDAPVFLKS-HKINK-FKPLAT 531

Query: 509 RF 510
           R 
Sbjct: 532 RI 533


>gi|254492772|ref|ZP_05105943.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226511812|gb|EEH61157.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 684

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 63  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 123 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 183 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 242

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 243 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 302

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 303 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 362

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 363 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 422

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 423 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 477

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 478 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 533

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 534 KYEHLMQR 541


>gi|94498900|ref|ZP_01305438.1| Methionyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428532|gb|EAT13504.1| Methionyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 681

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 133/547 (24%), Positives = 229/547 (41%), Gaps = 55/547 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF +  G +  +    D HG  I   AQ 
Sbjct: 2   RRILVTSALPYANGPIHLGHMLEYIQTDIWVRFQQARGNECHYVCADDAHGTAIMLRAQK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +  +               I +D++  T  + + +    ++ ++   G I     
Sbjct: 62  MGVTPEEQIAAVQEAHEKDFSDFMIKFDNYGSTHSEENREISSYIYNQLKANGHIATRGI 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHN---------------PVQ 158
              +    E +  D  V             G + +   A +N               PV+
Sbjct: 122 KQLFDPEKEMFLADRYVKGECPKCGTADQYGDNCESCGATYNAAELKNPKSVMSGATPVE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E YFF+L  +Q+ L ++  S     L  E  N++  ++ SGL++  +SR    +G 
Sbjct: 182 K-ESEHYFFKLPEFQEFLKTWTRSGT---LQDEVANKLAEWLDSGLQEWDISRDAPYFGF 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD----------LHVIGKD 266
           +IPD P    YVW+DA   Y+ +   L +         FW A            H IGKD
Sbjct: 238 EIPDAPGKYFYVWLDAPIGYMASFKQLCDRTDGLEFDDFWKAGADQGNEATEVYHFIGKD 297

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FHA++WP+ L SA    P  V++HG++   G K+SKS G  I     ++ +  + LR
Sbjct: 298 IINFHALFWPSMLHSAGFRTPNAVWAHGYVTVNGAKMSKSRGTFIKARTYLDNLQPEYLR 357

Query: 327 YFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +      D   + D   +RVN+DL   + N+ SR    + K    +         
Sbjct: 358 YYYAAKLNNRVDDFDLNLDDFAQRVNSDLIGKVINIASRCAGFVKKAGGELC------EL 411

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D  +L         I ++ +++   +A+ +++SL    + Y   ++PW L K       
Sbjct: 412 GDTQLLDHFIDKGNVIAQHYEDREFGKAIREIVSLADTANEYIHEKEPWALAKQEGKEQE 471

Query: 446 --TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
              +  + + + RQ+   L   VP +A K+   L + D N  + S  Q L+    ++K F
Sbjct: 472 VLEICSLGINLFRQIMTYLSPVVPDMAEKVCAFLNIDDLN--WDSRLQILQ-NHKINK-F 527

Query: 504 DPIFPRF 510
            P+  R 
Sbjct: 528 KPLMARI 534


>gi|254568374|ref|XP_002491297.1| Mitochondrial methionyl-tRNA synthetase (MetRS) [Pichia pastoris
           GS115]
 gi|238031094|emb|CAY69017.1| Mitochondrial methionyl-tRNA synthetase (MetRS) [Pichia pastoris
           GS115]
 gi|328352185|emb|CCA38584.1| methionyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 547

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 175/506 (34%), Positives = 270/506 (53%), Gaps = 32/506 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I Y NA PH+GH Y M++ D   R+  L      FTTGTDEHG K+  AA+  
Sbjct: 11  KYFITTPIFYVNAAPHLGHLYSMLLCDFQKRWLDLKETPNYFTTGTDEHGLKVQIAAELN 70

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               ++F D  S  F+ +A + DI YD FIRTT+  H  T R  W+ +   G IYKG +S
Sbjct: 71  KTDPRLFCDNLSNKFKHLAQISDIQYDRFIRTTDADHLATVRQFWETVWKNGYIYKGKHS 130

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           GWYS+ DE +Y + +V +           + V +  EE YFF+LSA+Q +L+  Y+++P+
Sbjct: 131 GWYSVSDETFYPESQVEQRDGKTVSTETGSEVVYESEENYFFKLSAFQSQLIDLYKANPQ 190

Query: 186 FILPIERRNEVISFVKSG-LKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           F++P    ++++  ++   L+DLS+SR      WGI +P+D    +YVW DAL NYLT+ 
Sbjct: 191 FVIPANYYSDLLKELEREPLQDLSISRPSSRLQWGISVPNDESQKIYVWFDALVNYLTSI 250

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY  +        WP   H+IGKDI RFH IYWPAFL++A +  P+KV  HG  L  G K
Sbjct: 251 GYPSSRYKEF---WP-GTHLIGKDISRFHCIYWPAFLMAAKVSPPEKVVVHGHWLMGGSK 306

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV DP+ + +  GVD+LR FL        D  + +  L         + I N+V
Sbjct: 307 MSKSKGNVADPLAIGDYYGVDSLRLFLGANSILSNDCDFTERKL-NDHRDLFIDKICNVV 365

Query: 363 SRS-----------VSMILKDYDGMIP------------TPGAFTESDESILSVCSRVLQ 399
           +R            +S   +D + +                    +S + I+    ++  
Sbjct: 366 TRCISKSFDPARSVMSFSNEDMNLVWKRILERGWEGDLEKAAELKKSYDEIVDDAQQLFS 425

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +I   M     H+++ ++  L+ +V+++ ++ +PW L K+N       ++V ++V R   
Sbjct: 426 KIDVLMSTFTTHKSVGEIFDLMLKVNQFVNSTEPWNL-KSNERLQDLSIFVALDVTRVCL 484

Query: 460 ILLQAFVPKLANKIFDILFVADENRC 485
           ILLQ F+P L+NK+ D++ V    R 
Sbjct: 485 ILLQPFIPGLSNKLLDMIKVESSKRT 510


>gi|240127258|ref|ZP_04739919.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 700

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 198

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGGETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 379 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 549

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 550 KYEHLMQR 557


>gi|94311701|ref|YP_584911.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987861|sp|Q1LJN4|SYM_RALME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|93355553|gb|ABF09642.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 690

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 125/529 (23%), Positives = 214/529 (40%), Gaps = 44/529 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N Q HIGH  E I  D+  RF R+ G +V +    D HG  +   A+ 
Sbjct: 4   RRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +D+     +   D   +S+D++  T  + +   C  ++  +  +  I +   
Sbjct: 64  EGITPKQLIDRVWTEHKRDFDNFLVSFDNYYSTDAEENRQLCEKIYLALKAEDLITERDV 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +     + P                 
Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVR 183

Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG-----LKDLSLSRKTFDW 216
                F       +  ++       +   E  N++  ++ +      L D  +SR    +
Sbjct: 184 KSSTHFFFKLSDPRCETFLREWVADLAQPEASNKMQEWLGAEGEASTLSDWDISRDAPYF 243

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVIGKDILRF 270
           G +IP  P    YVW+DA   Y  +   L    G     W  P       H IGKDIL F
Sbjct: 244 GFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKRGIDFDAWVGPHSTAEQYHFIGKDILYF 303

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           H ++WPA L  +    P  VF+HGF+   G K+SKS G  I      +  +  + LRY+ 
Sbjct: 304 HTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYTDTGMNPEWLRYYF 363

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  A  +D   + D    RVN+DL     N+ SR+   ++K +DG +           
Sbjct: 364 AAKLNASMEDLDLNLDDFVARVNSDLIGKYVNIASRAAGFLVKRFDGKVNEAALANP--- 420

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            +L    +   ++ +  + +   +AL  V+ L   V+ + D  KPWEL K     D    
Sbjct: 421 -LLEQLRQAAPQLAQYYEGREYSKALRLVMELTDAVNAFVDTNKPWELAKDESKRDALHA 479

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
              V++E  R L I L+  VP +A  +   L V  +   ++++D++L  
Sbjct: 480 ACSVSLEAFRLLTIYLKPVVPTMAAGVERFLNV--DPLDWRAIDKQLSA 526


>gi|182682199|ref|YP_001830359.1| methionyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130163|sp|Q87B68|SYM_XYLFT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710940|sp|B2I7S0|SYM_XYLF2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28057584|gb|AAO29432.1| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632309|gb|ACB93085.1| methionyl-tRNA synthetase [Xylella fastidiosa M23]
          Length = 702

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 130/538 (24%), Positives = 210/538 (39%), Gaps = 43/538 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+
Sbjct: 17  LVTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGM 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F+     +        ++++D +  T    +       +  +   G I     + +
Sbjct: 77  PPEAFIATTQASHERDFAAFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QWMEE 162
           Y      +  D  V             G + +   A ++P               +  + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF ++ +   L  +            +  E +   K GL+   +SR    +G KIPD
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLD-AKGGLRPWDISRDAPYFGFKIPD 255

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L            ++       H IGKDI+ FHA++WP
Sbjct: 256 QPGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR-EIA 334
           A L       P ++  +G++   G K+SKS G  I         +  DALRY+       
Sbjct: 316 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSG 375

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVNADL   + NL SR  S I   ++G +    A T  D       
Sbjct: 376 DVDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDRF 431

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
              L  IR+  +      A+ Q + L  E ++Y D  KPW + K +    +   V    +
Sbjct: 432 VAALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQHHADAQLHAVCTQGL 491

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P  +  I    F+A     +Q ++Q L  G  + + + P+F R 
Sbjct: 492 NLFRVLITALKPILPHTS--IQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTRI 546


>gi|303244973|ref|ZP_07331297.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484684|gb|EFL47624.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 691

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 135/541 (24%), Positives = 235/541 (43%), Gaps = 49/541 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EK  I+TA+AY N   H+GHA    I AD++ R+ +L+  DV+   GTD HG  I   A+
Sbjct: 3   EKYLITTALAYTNGPLHLGHARSTYIPADIMRRYLKLNKKDVIHVGGTDNHGVPITITAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV  +  V++     +   D L+I +D + +T    H  T +  + K+ + G IY+  
Sbjct: 63  KEGVKPEDIVNKYHNEIKRDLDNLNIEFDSYGKTHSDIHIKTAQEFYLKLKENGYIYEKE 122

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              +Y  +   +  D  V           +G   +       P + +             
Sbjct: 123 IEQFYCPKCNRFLADRYVEGICPFCGGEARGDHCEVCGRHLEPTELINPYCVNCNTTPEL 182

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R + ++   LS              +P   +N   S++K  L D  +SR   DWG+ IPD
Sbjct: 183 RKTIHRFFKLSALSDDLRRYVESSDMPEHVKNMAYSWIKE-LHDWDISRD-IDWGVPIPD 240

Query: 223 DPQYIMYVWIDALTNYL--------TTTGYLDNPDGSKAKFWPADL---HVIGKDILRFH 271
               +MYVW++A   Y+            Y    D   +     ++   H IGKDI   H
Sbjct: 241 SENQVMYVWLEAPIGYISFTKQLGEVWKDYWLKKDKENSNGKNNNVKIWHFIGKDITVHH 300

Query: 272 AIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++WP  L+ +    LP  V S G++  +G K+S S   V+   + ++    D LRYFL+
Sbjct: 301 SVFWPGMLIANGEYNLPSSVISGGYLTLEGRKMSTSKKWVVWVDDFVKYFDSDYLRYFLM 360

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDES 389
                 +D  +  D  +KR+N +L   IGN   R++    + + +  I       + D+ 
Sbjct: 361 VNAPLNRDCDFSFDEFQKRINTELIAIIGNFTHRALVFSHRKFKEIPIVDEENLKDEDKE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++S C   ++++  ++       AL  V+ L  + + YF   +PW +   N +R   +LY
Sbjct: 421 LISRCKETVKKVDNHIMEFNFKDALMGVVHLAKDGNNYFQKMEPWTV--ENENRLREILY 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               V++ +  LL  F+P  + K+ D++         + LD  ++ G  L K    +F +
Sbjct: 479 TCAVVVKHILYLLYPFMPNKSMKLLDLMN--------EELDLEIR-GNKL-KKPKVVFAK 528

Query: 510 F 510
            
Sbjct: 529 I 529


>gi|194099679|ref|YP_002002814.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|193934969|gb|ACF30793.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 719

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 38  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 98  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM------------- 160
              +    + +  D  V             G + +     ++P +               
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELFNPYSAVSGAKPEL 217

Query: 161 -EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGGETTLSDWDISR 277

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 278 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKAGSQTEMYHFIGK 337

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 338 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 397

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 398 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 457

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 458 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 512

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 513 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 568

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 569 KYEHLMQR 576


>gi|47567080|ref|ZP_00237797.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47570323|ref|ZP_00240969.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553008|gb|EAL11413.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556398|gb|EAL14732.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 544

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++  + F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHKEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGEDDQEFWDKEAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKQREDDPVLCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|229124576|ref|ZP_04253761.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228658916|gb|EEL14571.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
          Length = 544

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 238/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F                 R N +     +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTAYYSASKHWAEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL+    
Sbjct: 302 PAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLIVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|229199184|ref|ZP_04325865.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228584290|gb|EEK42427.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 544

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 234/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETIQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F L  +Q+++ +  E+  +              +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVENAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRALKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|149926203|ref|ZP_01914465.1| methionyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149825021|gb|EDM84233.1| methionyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 691

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 130/544 (23%), Positives = 226/544 (41%), Gaps = 46/544 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   H+GH  E I  D+  RF ++   +V +    D HG  +   AQ 
Sbjct: 3   RRILVTSALPYANGAIHLGHLVEYIQTDIWVRFQKMQSNEVYYVCADDTHGTPVMLRAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + + S   +       + +D++  T    +   C  ++ ++ D G I     
Sbjct: 63  EGISPEELIARVSTEHQRDFASFHVGFDNYYSTNAPENKAHCETIYTRLRDAGLIQTRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW-------------- 159
             +Y    E +  D  +             G   +   A + P +               
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTELKNAYSTVSGAAPVR 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
              + YFF+LS  + +      +  E  L +E   ++  +        L D  +SR    
Sbjct: 183 KSSDHYFFKLSDPRCENFLRQWTQSEGRLQVEASRKMQEWLGEEGSGKLADWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILR 269
           +G +IPD P    YVW+DA   Y  +   L         +  KA      +H IGKDIL 
Sbjct: 243 FGFEIPDAPGKYFYVWLDAPVGYFASFQNLCERIGVDYQEFLKADTNTEMIHFIGKDILY 302

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FHA++WPA L  A L  P KV +HGF+   G K+SKS G  I     I++ +  + LRY+
Sbjct: 303 FHALFWPAMLQFAGLRTPTKVNAHGFLTVDGAKMSKSRGTFITAESFIQQGLNPEWLRYY 362

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +  +  +D          RVN+DL     N+ SRS   ++K+++G +      +   
Sbjct: 363 FAAKLNSTMEDLDLSFSDFTARVNSDLVGKYINIASRSAGFLVKNFEGRVLD----SAMQ 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAS 445
             +L+        I  +   +   +A+ +V++   +V+ Y D +KPWEL K         
Sbjct: 419 HPLLADIRAQAAAIAAHYDEREYGKAIREVMACADKVNAYVDQEKPWELAKNPDKQAELQ 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           T   + +E  R L + L+  +P LA    +IL VA     +  ++  L     + + F  
Sbjct: 479 TACSICLEAFRLLTLYLKPVLPVLAGNAENILGVAP--MTWADVNTPLSSATPV-QAFKH 535

Query: 506 IFPR 509
           +  R
Sbjct: 536 LMQR 539


>gi|194375956|dbj|BAG57322.1| unnamed protein product [Homo sapiens]
          Length = 635

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 225/550 (40%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y +  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 26  VAGERNVLITSALPYVSNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 85

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 86  TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 145

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 146 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 205

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 206 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 264

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 265 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFMAKDNV 323

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 324 PFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIW 383

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P     T 
Sbjct: 384 RFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-EMVLTP 442

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K    +  
Sbjct: 443 DDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQ 502

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  G  + 
Sbjct: 503 RAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPAGHQIG 562

Query: 501 KTFDPIFPRF 510
            T  P+F + 
Sbjct: 563 -TVSPLFQKL 571


>gi|206978214|ref|ZP_03239094.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206743573|gb|EDZ55000.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 544

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEVI---------------SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+   E +                +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQTGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  V +
Sbjct: 418 EGLYKHVGEAIEKTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I     LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFVNLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|307353949|ref|YP_003895000.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157182|gb|ADN36562.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 669

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 123/541 (22%), Positives = 232/541 (42%), Gaps = 44/541 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +  + ++  + Y N   HIGH    + AD   RF R  G +V+F  G+D HG  +  ++
Sbjct: 2   NKSPVLVTCGLPYTNGPCHIGHLRTYVPADFYVRFLRHCGEEVVFICGSDNHGTPVVISS 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G++ +   ++   +F +    +++ +D F  T +  +H   R +   + + G IY+ 
Sbjct: 62  EAEGISPREICERYHTHFYETFRKMEVIFDRFGMTDDPANHKRTRSIVTDLINNGYIYEK 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPV 157
             S  Y    E +  D  V                                         
Sbjct: 122 TVSQCYCPHCEMFLPDRYVEGTCPHCGEKARGDECDQGCGKHLEPGEVLDPVCKICGEKA 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +  E++ +FF+L  + D L  +    PE    +  RN  + ++  GL D  ++R T DWG
Sbjct: 182 EMREQDHFFFKLGDFNDFLKGFL---PELKGTLNARNYAMGWINEGLHDWCITR-TLDWG 237

Query: 218 IKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAI 273
           +K P     ++YVW+DA   Y+  T  + +   G+  +FW  D    H IG+DI+  H I
Sbjct: 238 VKFPGRDDLVVYVWVDAPIGYMAFTEEWAEKTGGNWEQFWKGDAPITHFIGQDIIYHHCI 297

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVR 331
           +WPA L  +    P  + + G +       SKS G V+   +   ++G   D LRY+L+ 
Sbjct: 298 FWPALLKGSGYSTPYSIVASGMVKIDDRTFSKSRGYVVWTNDDYLDLGLSPDYLRYYLLS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             +  K+  +     + RVN +L + +GN + R+V    K   G+         +DE IL
Sbjct: 358 YTSHTKELNFSWREFQARVNNELVDTLGNFIYRTVHFASKKLGGIPDIG-----ADEEIL 412

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               +         +      ++ ++++L S  + Y     PW++ K + + A  V+   
Sbjct: 413 EEIKKRTALAESAAREYEFKSSIEEMMALASFGNTYIQTNAPWKMIKEDREGAEKVIRNC 472

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +++++ LA+L  + +P+ A  I++ L   D+  +     +      G  L+K  + +F +
Sbjct: 473 LQIVKALALLFDSVIPEKAQNIWEQLGYVDKISDHNLSEVTDGF-SGTKLNKP-EILFEK 530

Query: 510 F 510
            
Sbjct: 531 I 531


>gi|291044838|ref|ZP_06570547.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011732|gb|EFE03728.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 719

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 38  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 98  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 157

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 158 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 217

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 218 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 277

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 278 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 337

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 338 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 397

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 398 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 457

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 458 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 512

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 513 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 568

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 569 KYEHLMQR 576


>gi|45357889|ref|NP_987446.1| methionyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|68565983|sp|Q6M0E5|SYM_METMP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45047449|emb|CAF29882.1| Methionyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 663

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 142/534 (26%), Positives = 234/534 (43%), Gaps = 46/534 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  ++TA+AY N   H+GHA    I AD+  R+ +L G +V+   GTD HG  I   A+ 
Sbjct: 2   RHLVTTALAYTNGPLHLGHARSTYIPADIFTRYLKLKGEEVIHVGGTDNHGVPITLTAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L+I +D+F RT    H +T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  + + Y  D  V                               Y    ++  +  
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE   P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDSLKEYIENSPEM--PEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
           P     +MYVWI+A   Y++ T  L +   S       D    H IGKDI   HA++WP 
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDIWKSYWLENTDDSKISHFIGKDITVHHAVFWPG 297

Query: 278 F-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                    +P  V S G++  + +K+S S   V+   + +E    D LRYF +      
Sbjct: 298 ILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFVENFSSDYLRYFFMINAPLN 357

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCS 395
           +D  +  D  +KR+N +L + IGN   R++    + +            + D+ ++S C 
Sbjct: 358 RDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPIVDLNQLKDEDKKLISKCD 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
              + +   ++      AL ++I L  E + YF    PW +K  N +R   V+Y    V+
Sbjct: 418 DTEKLVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPWAIK--NEERLKEVMYTCSVVL 475

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +  LL +F+P+    + + +         + LD +++ G  L K    IF +
Sbjct: 476 KYIIYLLSSFMPEKTALLLEYMN--------EELDLKVR-GNPL-KKPKVIFTK 519


>gi|260441474|ref|ZP_05795290.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 700

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 126/548 (22%), Positives = 223/548 (40%), Gaps = 52/548 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  DV  RF +L G +  +    D HG  +  AAQ 
Sbjct: 19  RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECYYCCADDTHGTPVMLAAQK 78

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +  +          I YD++  T    +    + +++ +   G I     
Sbjct: 79  QGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQFSQDIYRALKANGKIESRVI 138

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
              +    + +  D  V             G + +     ++P               + 
Sbjct: 139 EQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPEL 198

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSR 211
            E E +FF+L    D L ++   +         + E ++ +K          L D  +SR
Sbjct: 199 RESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPEALNKMKEWLGEGEETTLSDWDISR 258

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGK 265
               +G +IPD P    YVW+DA   Y+ +     D       +++ A       H IGK
Sbjct: 259 DAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQTEMYHFIGK 318

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           DIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +E+ +  + 
Sbjct: 319 DILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNPEW 378

Query: 325 LRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G        
Sbjct: 379 MRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRPKDVSGS 438

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--P 441
                ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWEL K     
Sbjct: 439 -----ALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDANKPWELAKQEGQD 493

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R   V    +     L   L   +P+ A      L +  +   +++  + L  G     
Sbjct: 494 ERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWKNTRETL--GEHAIN 549

Query: 502 TFDPIFPR 509
            ++ +  R
Sbjct: 550 KYEHLMQR 557


>gi|118576573|ref|YP_876316.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195094|gb|ABK78012.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 548

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 137/540 (25%), Positives = 244/540 (45%), Gaps = 42/540 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R++  I++A+ Y N + H+GH A   + ADV  RF RL G++  +   +D++G  I   +
Sbjct: 2   RDRAIITSALPYANGEIHLGHIASTYLPADVTTRFLRLKGVEAYYICASDDYGTPILIQS 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G T + +V+  +R  R+  + L IS+D F RT+   + +  + ++  +++ G IY+ 
Sbjct: 62  EKEGKTPEEYVEHWNRRDREDFEALGISFDFFSRTSSPANTEFVQHVFTVLNEGGHIYED 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQ-----------------------YYNAQHNPVQW 159
               +Y   D  +  D  V                              +     N    
Sbjct: 122 EVVQFYCENDSKFLPDRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVK 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                YFFRL  +  +L  + E +    L  + +  V +++KSGL D  ++R    WG+ 
Sbjct: 182 RSSRHYFFRLGGFSGRLSEWLEGNTN--LQEDVKKYVQNWIKSGLSDWDITRD-IPWGVP 238

Query: 220 IPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIY 274
           IP D     + Y W D    Y++         G  AK +       H IGKDI+  H ++
Sbjct: 239 IPLDGAAGKVFYGWFDNHLAYISAASEFLGKRGIDAKEFWNSADIYHFIGKDIVYHHYLF 298

Query: 275 WPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            PA  L +    LP  + + G +  + +KISKS    I   E + E   D LR++L    
Sbjct: 299 LPAIRLGTGEYKLPDYIPTRGHLTLESKKISKSRNWYIGLREFLGEYPADYLRFYLAYIN 358

Query: 334 ACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D   +D      R+N++L   +GN V+R++    K +DGM+P P    ++D+   +
Sbjct: 359 PYAQDDLNFDWGDFAARINSELIGNVGNFVNRALGFAAKRFDGMVPEPDTVGKTDKEAEA 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + + +E+        I RAL +++   +  ++YF   +PW   K  P  A+T +Y++ 
Sbjct: 419 RITVLSEELGXXXXXXXIDRALKRILEFSAHFNQYFQHAEPW---KGGPG-AATCVYMSA 474

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ-RLKPGFMLHKTFDPIFPR 509
             +R +A+ L  F+P+ A +I+  L +        + S+    ++PG  L     P+F R
Sbjct: 475 NAVRSMAVALCPFLPESAERIWGQLGLEGRASEEQWDSISAVAIRPGHRLGDPV-PLFAR 533


>gi|212645096|ref|NP_001129797.1| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
 gi|193247911|emb|CAQ76500.1| C. elegans protein Y105E8A.20b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 524

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 178/511 (34%), Positives = 274/511 (53%), Gaps = 20/511 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKA 61
           +   ++++ I Y NA+PHIGHAY  ++ DV  R++RL   G    F+ GTDEHG KI +A
Sbjct: 10  KSSTFVTSPIFYANAEPHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQA 69

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A  T K F D+ S  F D+   L++S+ +FIRTT+  H +  +  W KI D G IYK
Sbjct: 70  ALAAKSTPKQFCDRVSSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYK 129

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
             YSG+YS+ DE +  +++V K     GA+     +   PV+W+EEE Y FRLS +++K+
Sbjct: 130 STYSGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKV 189

Query: 177 LSYYESHPEFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
             +       + P + ++  ++ ++      +S SR    WGI +P+DP   +YVW+DAL
Sbjct: 190 AEWINRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDAL 249

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT TG+ +         WP    VIGKDI +FH  YWPAFL++A L LP+KVF HG 
Sbjct: 250 VNYLTVTGFPNAQSV-----WPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGH 304

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            L    K+SKSLGNV++P E I +   + LRYFL++      D  ++ +   + +N+DL 
Sbjct: 305 WLIDNVKMSKSLGNVVNPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSCLQTINSDLV 364

Query: 356 NGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN----MQNQLI 410
           N +GNL++R +V  I K+                        +++E REN          
Sbjct: 365 NNVGNLLNRSTVEKINKEGMYPKMEIEDIEAEIRENAKKLMEMVEESRENCVDLYDEMSY 424

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            + +  ++  + E +R F + +PW+  + +  R  ++L+VT + IR + ILLQ   PK+A
Sbjct: 425 FKIIENLMLTMKEANRLFQSSQPWK--EIDEKRLKSLLFVTYDTIRVVTILLQPITPKMA 482

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               + L V    R  ++       G  L  
Sbjct: 483 EFCLNRLGVPKNERNLENSRFGSYSGGKLGA 513


>gi|229082281|ref|ZP_04214744.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228700713|gb|EEL53236.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 544

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 240/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFAHLLEPFLPFSSERVRNTLSIV--NRNWE-------PQNTLPSRIDSVQPLFERI 527


>gi|320163393|gb|EFW40292.1| methionyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1036

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 124/556 (22%), Positives = 229/556 (41%), Gaps = 51/556 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G      
Sbjct: 304 DQRNILITSALPYVNNVPHLGNIIGCVLSADVYARFCRERGYNTLYICGTDEYGTATETK 363

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+  +  R++ +   IS+D F RTT  +  +  + ++ +      + +
Sbjct: 364 ALEEGLTPQQICDKYHKLHREIYEYFQISFDHFGRTTTPQQTEISQDIFLRALKNDTLLE 423

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                        Y  D  V            +G          N V+ +E         
Sbjct: 424 ESVEQLLCETCNRYLADRFVEGICPSCKYDDARGDQCDKCGKLLNAVELVEPRCKLCRSR 483

Query: 165 YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFD 215
              R S +    L   +   +                ++   S++K G+K   ++R    
Sbjct: 484 PVVRPSRHMFLNLPMLDGQIKEWYAGSSVKGDWTASAKHITSSWLKEGVKPRCITRD-LK 542

Query: 216 WGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG+ +P D   + + YVW DA   Y++ T      +  K    P+ +     + KD + F
Sbjct: 543 WGVPVPLDGFREKVFYVWFDAPIGYISITA-AYTAEWEKWWKNPSQVQLYQFMAKDNVPF 601

Query: 271 HAIYWPAFLLS--------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VG 321
           H+I +PA ++          N  L   + +  F+ ++  K SKS G  +      +  + 
Sbjct: 602 HSIIFPASIIFPASQLAAKDNYTLVHHISAVEFLNYEDGKFSKSRGVGVFGNHARDTGLA 661

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           +D  R++L+       D  +    L  +VN +L   +GNLV RS+S I  ++ G +P   
Sbjct: 662 IDIFRFYLLGIRPEYTDSVFSWTDLASKVNNELLANLGNLVQRSLSFIKANFAGKVPKVV 721

Query: 382 AFTESDES---ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              ++D      +++ +R L+E  + ++   +  AL  V+ + S  ++YF   +PW+  K
Sbjct: 722 LNVDTDAQSCNFVALVNRYLREYIDLLEQVHLRDALRLVLKISSIANQYFQTVQPWKTIK 781

Query: 439 -TN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            T+     R +T L +    +  L+ LL  F+P    KI + L  A  +         L 
Sbjct: 782 LTDDLSKQRTATCLGLCANFVHLLSTLLFPFMPVTGKKILEQLNAAPGSLRADHWGLTLP 841

Query: 495 PGFMLHKTFDPIFPRF 510
            G  +  T   +F + 
Sbjct: 842 EGHEIG-TPSVLFEKI 856


>gi|115481896|ref|NP_001064541.1| Os10g0400100 [Oryza sativa Japonica Group]
 gi|78708564|gb|ABB47539.1| methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113639150|dbj|BAF26455.1| Os10g0400100 [Oryza sativa Japonica Group]
 gi|215695151|dbj|BAG90342.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218184471|gb|EEC66898.1| hypothetical protein OsI_33478 [Oryza sativa Indica Group]
 gi|222612783|gb|EEE50915.1| hypothetical protein OsJ_31437 [Oryza sativa Japonica Group]
          Length = 605

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 118/561 (21%), Positives = 228/561 (40%), Gaps = 57/561 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ R  + +++A+ Y N  PH+G+    ++ AD  AR+ RL G +VL+  GTDE+G    
Sbjct: 11  VEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G + +   D+     +++ +  DIS+D F RT+  +  + C+ ++ K+ D   +
Sbjct: 71  TKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWL 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF--------RLSA 171
            +      Y    + +  D  V      +  N         E+ G           +   
Sbjct: 131 SENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKV 190

Query: 172 YQDKLLSYYESHPEFILPIERRN--------------------EVISFVKSGLKDLSLSR 211
                      H    LP+ R                         +++K GLK   ++R
Sbjct: 191 CGSTPCVRDTDHLFLELPLLREKLEKYIDETSLTGSWSQNAIHATNAWLKEGLKPRCITR 250

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 251 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITA-CYTPEWEKWWKNPENVELYQFMGKD 308

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVD 323
            + FH + +P+ LL         K +    ++ ++  K SK+ G  +   +     +  +
Sbjct: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +    L+ + N +L N +GN ++R +S I K     Y  ++P 
Sbjct: 369 VWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVVPD 428

Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                     +S+     +++ +  + M    I + L   +++ SE + Y    + W+L 
Sbjct: 429 SPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWKLY 488

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF---------- 486
           K +P   +TV+  +V ++  LA LL+ F+P  +  +   L +  +E+  F          
Sbjct: 489 KQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCDEKGEVEKA 548

Query: 487 QSLDQRLKPGFMLHKTFDPIF 507
           +     +  G  + K   P+F
Sbjct: 549 KRPWDLIPSGHRIGKPA-PLF 568


>gi|330836672|ref|YP_004411313.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748575|gb|AEC01931.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 748

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 127/540 (23%), Positives = 231/540 (42%), Gaps = 42/540 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  I++A+ Y N  PH+G+  +++ ADV ARF R  G + L+  GTDE+G      A 
Sbjct: 11  KKRRLITSALPYVNNIPHLGNLTQVLSADVFARFCRSKGYETLYVCGTDEYGTATETKAL 70

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+     RD+    +IS+D F RT+        + ++  +   G I++  
Sbjct: 71  QEGVTPQELCDRYHAIHRDIYRWFNISFDHFGRTSTPLQTKIVQDIFNAVDANGYIHEHE 130

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
               Y   D+ Y  D  V            +G   +      NP   ++           
Sbjct: 131 IEQLYCTHDQMYLADRYVTGTCPHCAYENARGDQCENCGTLLNPTDLIKPVCGVCGNTPE 190

Query: 167 FRLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKDLSLSR---KTFDWGI 218
            R + +    L       E  +          N  I   K+ +++    R   +   W I
Sbjct: 191 LRKTKHLYLDLPQILPLLEEWMQKASVEGFWANNAIQMTKAWIREGLKERGITRDLKWSI 250

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAI 273
            +P       + YVW DA   Y++ T  L +   +  +  P ++     IGKD + FH +
Sbjct: 251 PVPRKGYENKVFYVWFDAPIGYISITANLTDQWETWWRN-PENVELFQFIGKDNIPFHTV 309

Query: 274 YWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLV 330
            +P+  L+          + S  ++ ++G K SKS G  I   +V +  + VD  R+++ 
Sbjct: 310 IFPSSQLATGQKWTMLHHMSSTEYLNYEGGKFSKSKGIGIFGNDVQDTGIPVDIWRFYMY 369

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  D  +     +++VN +L   + NLV+R++S I + YDG +P+       DE++
Sbjct: 370 YNRPETSDVTFTWKDFQEKVNGELIGNLSNLVNRTLSFIKRFYDGELPSGS----IDENL 425

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           ++  +     I   ++      AL  + +L    ++ F A +PW+ + T+P RA+ +L  
Sbjct: 426 MTQVAEKEAVIEALLERAEERDALRTIFALSDIGNKAFQAGEPWKTRTTDPTRAADLLTT 485

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V VI  +A+L+  F+P  + KI   L    E   ++ L   L+ G       + +F + 
Sbjct: 486 LVYVIHDIAVLIAPFMPGTSEKILGWLGR--EGDTWKDL--GLRDGIGRIGDVELLFSKL 541


>gi|161723239|ref|YP_096876.2| methionyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|68565969|sp|Q5ZRJ9|SYM_LEGPH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 670

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 231/543 (42%), Gaps = 45/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGV 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    
Sbjct: 181 SPVEKESEHYFFDLPRYEELLKDWTRKG---HLQTEVTNKLSEWFEAGLKQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFW-----PADLHVIGKDILR 269
           +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ 
Sbjct: 238 FGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+ 
Sbjct: 298 FHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYF 357

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + D    RVNADL   + N+ SR    I K +D  + +      +D+
Sbjct: 358 AAKLNGRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS----ELNDQ 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
            + +      + + +   ++   RA+ Q++    +V++Y DA KPW L K          
Sbjct: 414 KLYNDLLSARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +A    + L    E   + S+D+ L        TF P+
Sbjct: 474 ICTMGINLFRILITYLKPVLPMMAKASEEFLN--SEPLHWDSIDKPLL--NHRINTFKPL 529

Query: 507 FPR 509
             R
Sbjct: 530 MVR 532


>gi|322696090|gb|EFY87887.1| methionyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 891

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 182/522 (34%), Positives = 272/522 (52%), Gaps = 41/522 (7%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ADVL R+ ++ G +  F TGTDEHG KI +AA   G+  K F D  S  FR++A   
Sbjct: 1   MVLADVLKRWQQIKGKETFFLTGTDEHGMKIQRAAAKEGIAPKEFCDNYSNKFRELAAAG 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEV-- 141
           DISYD FIRTT+  H +     W ++        ++YKG + GWY++ DE +Y +D V  
Sbjct: 61  DISYDAFIRTTDLEHKEAVSEFWLQLKHTLPEHLELYKGTHEGWYAVSDECFYPEDLVRP 120

Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G      +   + V+W++EE +FF L+ Y+D LL +Y+ +P +I P  R NEV 
Sbjct: 121 DIVPQTGKKIMVSDETGSEVEWVKEETWFFPLTKYKDALLKFYDENPNWITPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKA 253
           ++V++ L+DLS++R      WGI  P+D    +YVW+DAL NY+T  GY           
Sbjct: 181 NWVENHLEDLSITRPAARLSWGIPDPEDHNQTIYVWVDALINYITQAGYGRKWHSSSDNT 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+ +IGKDILRFHAIYWPA L++ +LPLPK++  H        K+SKSLGNV++P
Sbjct: 241 GLWPADMQIIGKDILRFHAIYWPALLMALDLPLPKQLLCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKD 372
              ++   +D LRYFL+R  +  KD  Y    +      +L   IGNL+ R     +   
Sbjct: 301 FFAVQRWDIDPLRYFLMRNGSFTKDMSYSNQLIGSVYAKELQANIGNLLYRIARPKVTSK 360

Query: 373 YDGMIP----TPGAFTES----DESILSVCSRVLQEIR----ENMQNQLIHRALAQVISL 420
           +  +        GAF E      + +       L++I     E M+      A+ +V +L
Sbjct: 361 WSTLEAVGAFRRGAFGEIPGHTSQQLFVSLDDHLEKITSAFFEEMEKFNTGGAIREVFNL 420

Query: 421 VSEVDRYFDAQKPWELKKT-NPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + E +RY    +PW L K+ NP      + V+Y   E +R   ILLQ  +P  A+ + + 
Sbjct: 421 LRETNRYVSDTEPWNLVKSPNPQSRILLNLVIYNCAEALRIAGILLQPIMPTKASLLLNE 480

Query: 477 LFVADENRCFQSLDQRLKPGFMLH----------KTFDPIFP 508
           L V ++ R  +   +   P +             K +D IFP
Sbjct: 481 LGVREDRRTLEFASKGKDPEYGTEAKTGDSAARLKKWDTIFP 522


>gi|307825405|ref|ZP_07655624.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733580|gb|EFO04438.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 672

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 126/543 (23%), Positives = 235/543 (43%), Gaps = 46/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I  
Sbjct: 1   MSDR-KILVTSALPYANGPIHLGHLVEYIQTDIWVRFQKQRGNLCYYVCADDTHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +  + Q  +          +++D++  T  + +     ++++++ D G I 
Sbjct: 60  RADREGITPEQLIAQVGKEHLADFTEFSVAFDNYHSTHSEENKALSSLVYERLRDAGHIS 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
               +  +      + +D  +             G   +     + P +           
Sbjct: 120 SRTITQAFDPVKNMFLSDRFIKGECPKCGAADQYGDGCEVCGTTYAPTELKNAVSAISGA 179

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                +   YFF L+ + D L  +  +     L  E  N++  ++  GL+   +SR    
Sbjct: 180 KPVDKDSVHYFFDLANFSDMLREWTHAG---HLQPEVSNKLAEWLDGGLQQWDISRDAPY 236

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IPD P    YVW+DA   Y+ +     D       +FW  +      H IGKDI+ 
Sbjct: 237 FGFEIPDAPGKYFYVWLDAPIGYMASFKNLCDKQGLDFNEFWSKNSDAELYHFIGKDIIY 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L  A+   P  +F+HGF+   GEK+SKS G  I     ++ +  + LRY+ 
Sbjct: 297 FHALFWPAMLSGAHFRTPSAIFAHGFLTVNGEKMSKSRGTFIKARTYLDHLNPEYLRYYF 356

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   + D   +RVN+DL   + N+ SR    I K +D  +        S++
Sbjct: 357 AAKLSAGVDDLDLNFDDFSQRVNSDLVGKVVNIASRCSGFIAKRFDNRLSEQC----SEQ 412

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
           ++         +I E  + +   +A+ ++++L  + ++Y D +KPW + K          
Sbjct: 413 ALFHEFVTANTQIAELYEAREFGKAMREIMALADKANQYIDEKKPWLIAKEEGKDQELHE 472

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + + + R LA+ L+  +P LA      L +  E + +  +D +      +++ F P+
Sbjct: 473 VCTMGLNLFRLLAVYLKPVIPVLAGNAESFLNI--EAQAWP-VDAKPLLNHAINE-FKPL 528

Query: 507 FPR 509
             R
Sbjct: 529 MTR 531


>gi|260433994|ref|ZP_05787965.1| methionyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417822|gb|EEX11081.1| methionyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 572

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 115/555 (20%), Positives = 234/555 (42%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLIGSQLPADLFARYQRGRGNEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D F R++  ++H   +    K+++ G I +   
Sbjct: 63  AGKPVAEYCAEMHEVQADIAKRFGLSFDHFGRSSSPQNHKLTQHFAGKLAEAGLIREVTE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  D  +  D  +            +G   +    Q +P                +
Sbjct: 123 KQVYSKADGRFLPDRYIEGTCPNCGYEKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLYLRQSAMKDQLDAWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +    +        + YVW DA   Y+       +  G       ++W  D        
Sbjct: 242 PVKKGDEDWPGMEGKVFYVWFDAPIEYIACAKEWADAHGKPDAEWERWWRTDKGADDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           + +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 DILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G + E +++++   ++ ++    +M+   + ++  ++ ++    + Y  A  PW   
Sbjct: 422 PAGGEYGEREQALIEELTKRIRAYEAHMEAMEVRKSAQELRAIWVAGNEYLQAAAPWSTF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ--SLDQRLKP 495
           K +P++A+  + + + +IR  A+L   F+P+ + ++   +   D +      +    L  
Sbjct: 482 KEDPEQAAAQVRLGLNLIRLYAVLSAPFIPETSARMLSAMNTLDTSWPEDVSAALSALPA 541

Query: 496 GFMLHKTFDPIFPRF 510
           G       D +F + 
Sbjct: 542 GHAFT-VPDVLFAKI 555


>gi|297562998|ref|YP_003681972.1| methionyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847446|gb|ADH69466.1| methionyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 605

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 232/544 (42%), Gaps = 56/544 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M     +  + A  Y N   HIGH     + +DV +RF R+ G  VL  +GTDEHG  + 
Sbjct: 1   MSSNRHILTAVAWPYANGPRHIGHVSGFGVPSDVFSRFQRMSGNHVLMVSGTDEHGTPVQ 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +   D+ +R   +    L +SYD F RTT   H+   + L+  + + G +
Sbjct: 61  VLADQEGVTPRELADRYNRIIAEDLVGLGLSYDLFTRTTTGNHYAVAQQLFTALHENGYV 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV----------------- 157
           +     G  S        D          G DG   +   N                   
Sbjct: 121 FAHTTKGAVSPSTGRTLPDRYIEGICPICGYDGARGDQCDNCGNQLDPIDLISPRSRING 180

Query: 158 ---QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              ++++ E +   L A+ D L ++ +       P     +    +   L+  +++R   
Sbjct: 181 EKPEFVDTEHFMLDLPAFADALTTWLKGKEGQWRPNVL--KFSLNLVEDLQPRAVTRD-L 237

Query: 215 DWGIKIPDDPQ-----YIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD----LHV 262
           +WG+ +P +         +YVW DA+  YL+ +       G      ++W  D     + 
Sbjct: 238 NWGVPVPLEGWSDNANKRLYVWFDAVIGYLSASVEWARRIGEPEAWRRWWQGDEARSYYF 297

Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FH++ WPA LL                 L +P +V S  F+  +G K S S  
Sbjct: 298 MGKDNIVFHSVVWPAILLGHNGEGDRGGEPGPLGELKVPTEVVSSEFLTMEGRKFSSSRR 357

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + +E    DALRY+++      +D  +      +R N +L    GNLV+RS+SM
Sbjct: 358 VVIYVRDFLERYSADALRYYIMAAGPETQDTDFTWAEFVRRNNDELVAAWGNLVNRSISM 417

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K+    IP  G  T+ D  +L         + E ++       L + +  V+E ++Y 
Sbjct: 418 AAKNLG-EIPAAGELTDEDRRVLEDSRAAFARVGERLERSQFKAGLQEAMRTVAEANKYI 476

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             Q PW LKKT+P+R +TVL+V +++++    LL  ++P+ ANK++ +L           
Sbjct: 477 SDQAPWALKKTDPERMATVLHVALQLVQDANTLLTPYLPESANKVYAMLGGTGTWTGMPR 536

Query: 489 LDQR 492
           +D  
Sbjct: 537 IDAG 540


>gi|320592228|gb|EFX04667.1| methionyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 630

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 189/589 (32%), Positives = 284/589 (48%), Gaps = 86/589 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +   +  Y++T I Y N+ PH+GH Y M++ADVL R+  L G   L  TGTDEHG K+ +
Sbjct: 41  VSATKPYYVTTPIFYVNSDPHVGHMYSMVLADVLKRWQTLQGRRALLCTGTDEHGMKVQQ 100

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  AGV  K F D+N+  F D+A    ++ D FIRTT+  H    R +W+++  +G +Y
Sbjct: 101 AATRAGVAPKQFCDENAAVFADLARRAQLANDFFIRTTDSDHVAAVRAIWRRLRRRGYVY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           +  + GWY + DE +Y +  V K      G            V+W EE  Y FR++A +D
Sbjct: 161 QTKHQGWYCVSDETFYPEALVEKRIAAATGRVEMVSTETGKTVEWTEEINYHFRMTAVRD 220

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWI 232
           +LL  Y + P+F++P  R  EV+ +V + L+DLS+SR      WG+ +P+D    +YVW+
Sbjct: 221 RLLQLYAARPDFVVPAARMAEVVHWVTNQLEDLSISRPASRLTWGVAVPEDASQTIYVWV 280

Query: 233 DALTNYLTTTGYLDNP---------------------------------------DGSKA 253
           DAL NYLT  GY D                                            +A
Sbjct: 281 DALVNYLTKAGYPDRWEGGEEGDADQGQVRAVASSNSSSYPQAVSSSSVPTPEQRQRQEA 340

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+ V+GKDI+RFHA+YWPA LL+ +LP+P+++ SH       +K+SKS GNV++P
Sbjct: 341 GGWPADVQVMGKDIVRFHAVYWPALLLALDLPVPRQLLSHAHWTLGRKKMSKSDGNVVNP 400

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              ++  GVDA+RY+LV +    +D  Y  + + +R    L  G+GNL+ R +     + 
Sbjct: 401 FYAMDRFGVDAMRYYLVYDGGVEQDADYGNEHIVERYKKGLQGGLGNLLGRIMRTTRWNV 460

Query: 374 -------------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
                            P P   T++     S    +      +M       AL  V+ L
Sbjct: 461 REAVEEATAAGKAGMAAPEPSLETQA-----SAIDGIAAVAAGHMDRLDARGALRAVMGL 515

Query: 421 VSEVDRYFDAQKPWELKKTNPD---------------RASTVLYVTVEVIRQLAILLQAF 465
           V + +R+     PW L +T                  R   V+++  E +R ++ILLQ  
Sbjct: 516 VYQTNRFVHENAPWTLARTADVADEAGAVDVAAADRLRMRQVVFLAAEALRVVSILLQPV 575

Query: 466 VPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHKTF----DPIFP 508
           +P  A ++ D+L VA   R FQ   L      G  L        D +FP
Sbjct: 576 MPAKAAEVLDVLGVASGRRTFQDARLGADTDYGLPLRSPGKSSDDGLFP 624


>gi|66815711|ref|XP_641872.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74856380|sp|Q54X95|SYMC_DICDI RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|60469912|gb|EAL67895.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 736

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 114/544 (20%), Positives = 218/544 (40%), Gaps = 41/544 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + ++  GTDE+G      A 
Sbjct: 16  RNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYICGTDEYGTATETKAL 75

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           + G T K   D+     +++ +  +IS+D F RT+     +  + ++ KI D G      
Sbjct: 76  SEGCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQDIFNKIKDNGYTLTQE 135

Query: 124 YSG-WYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------Y 165
               +     + +  D  V            +G      +   NP + +           
Sbjct: 136 IEQLYCEQTCKMFLADRFVEGTCPHCKFEDARGDQCDGCSKLLNPTELINPRCKVCSKPP 195

Query: 166 FFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDW 216
             + + +    L   +   +                     ++VK  LK   ++R    W
Sbjct: 196 VIKSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVKGELKPRCITRD-LKW 254

Query: 217 GIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFH 271
           G  +P +     + YVW DA   Y++ T    N      K  P +   +  +GKD + FH
Sbjct: 255 GTPVPMEEFKDKVFYVWFDAPIGYISITAEYTNEWEKWWKN-PENVKLVQFMGKDNVPFH 313

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALRYF 328
            + +PA L+ +  N  L   + +  F+ ++  K SKS    +         +  +  R++
Sbjct: 314 TVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGAKATGIPSEVWRFY 373

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTES 386
           L+       D  +  D      N +L N  GNLV+R + M+  +  ++G++P  G   E 
Sbjct: 374 LLNNRPESSDSIFSWDDF-NFKNNELLNNFGNLVNRVLKMLNTNAAFNGVVPKIGELNEV 432

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+ ++      L +  + ++   +   L   +S+    + Y    KPW+L   + +R   
Sbjct: 433 DKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQDNKPWDLSGKDNERCGQ 492

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           VL + + +I+ L+ LL+ ++P L +K+   L V             +  G  + K   P+
Sbjct: 493 VLAILINLIKLLSTLLEPYIPSLTDKVHQQLNVEPTKYSTHFDINAIPAGHEISKEILPL 552

Query: 507 FPRF 510
             + 
Sbjct: 553 VKKI 556


>gi|228948767|ref|ZP_04111044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228810899|gb|EEM57243.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 544

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 236/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F                 R N +     +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWVEETGKDDREFWDGEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPNGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|269928562|ref|YP_003320883.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787919|gb|ACZ40061.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 593

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 139/514 (27%), Positives = 225/514 (43%), Gaps = 40/514 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E++ +  A  Y N   H+GH A   + AD+ AR+HRL G  VL  +G+D HG  I  +A+
Sbjct: 3   ERIGVFVAWPYANGDLHLGHVAGVYLPADIFARYHRLRGNRVLMVSGSDAHGTPITVSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AGV+ + F ++  R F +    L IS+D F  T  + H    + +++ + ++G I+   
Sbjct: 63  RAGVSPREFFERYHRRFLESFIGLGISFDLFTHTDTENHAAVSQDIFRVLYERGYIHTEA 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQ 158
            +  Y   D+ +  D  V                                      +   
Sbjct: 123 MAQLYCETDQRFLPDRYVEGTCPHCGYPNARGDQCDNCGRTLDATELIDPRCKLCGSQPV 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E +FF L A++  LL Y      +   ++R  E    ++ GLK   ++R   +WGI
Sbjct: 183 VRETEHFFFDLPAFEGPLLEYIGRQEHWRPNVQRFVENY--LRGGLKPRPVTRD-IEWGI 239

Query: 219 KIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILR 269
            +P       +MYVW +A+  YL+ +       G +   + W  D      + IGKD + 
Sbjct: 240 PVPIPGYEHKVMYVWFEAVIGYLSASIEAAKNRGEEKAWEAWWTDPAARGYYFIGKDNIP 299

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FHAI WPA L+  +  L LP  + +  F+  +G++ S S    +   + +E    D LRY
Sbjct: 300 FHAIIWPAELMGYDERLNLPFDIPASEFLNLEGQQFSTSRNWAVWLPDYLERYAPDPLRY 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L        D  +   G  +R N +L    GNLV+R +S  ++ +DG +P PG     D
Sbjct: 360 YLTAIAPETGDSEFTWRGYVERNNNELVAAWGNLVNRVISFAVRHWDGRVPEPGPQDARD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +L   S     +  +        AL + +SL  EV+RY D + PW   K +   A T 
Sbjct: 420 TELLDQISAGFGTVGAHYARAEFRAALRETMSLAREVNRYLDDKAPWFQIKEDRAAAGTT 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +YV +  I  LA L    +P  + ++   L   D
Sbjct: 480 IYVALRAIDSLATLFAPVLPFTSAEVKRFLGYED 513


>gi|229181329|ref|ZP_04308659.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228602222|gb|EEK59713.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 544

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 232/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F L  +Q K+    E   E              +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQKIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + + A      +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWVEETGKDDQEFWASEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + +++ E ++      AL  V   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKQVGEAIEQTKFKVALETVFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFAHLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|188992353|ref|YP_001904363.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|226710938|sp|B0RWA1|SYM_XANCB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167734113|emb|CAP52319.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 694

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 125/541 (23%), Positives = 209/541 (38%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  + +          +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLDGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G   +   A        H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLAAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G+++  G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFVARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDPAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +     L  IRE  +      A+ Q ++L  E ++Y D  KPW + K      +  +V  
Sbjct: 418 ARFVEALAPIREAYERNDPASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+ A +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRLLVAALKPILPRTAAEAEAFLSAP--MTSWEDVSRPLT--CHVIQPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|21230796|ref|NP_636713.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769206|ref|YP_243968.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|25009358|sp|Q8PAY7|SYM_XANCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81304835|sp|Q4USM5|SYM_XANC8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21112396|gb|AAM40637.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574538|gb|AAY49948.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 696

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 125/541 (23%), Positives = 209/541 (38%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  + +          +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLDGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G   +   A        H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLAAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G+++  G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFVARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDPAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +     L  IRE  +      A+ Q ++L  E ++Y D  KPW + K      +  +V  
Sbjct: 418 ARFVEALAPIREAYERNDPASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+ A +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRLLVAALKPILPRTAAEAEAFLSAP--MTSWEDVSRPLT--CHVIQPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|229153227|ref|ZP_04281406.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228630326|gb|EEK86976.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 544

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 235/538 (43%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTF-DWGIKI 220
             +Y +   F                 R N +     +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQEQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRAVSRDLPIGVSIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
                  +YVWI+A+  Y + +  + +       +FW +D    +V GKD + FH++ WP
Sbjct: 243 KGYEDKKIYVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFHSVIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G++P      E    +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++   L +   N          +P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRSTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|302911964|ref|XP_003050609.1| hypothetical protein NECHADRAFT_96414 [Nectria haematococca mpVI
           77-13-4]
 gi|256731546|gb|EEU44896.1| hypothetical protein NECHADRAFT_96414 [Nectria haematococca mpVI
           77-13-4]
          Length = 769

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 178/491 (36%), Positives = 263/491 (53%), Gaps = 31/491 (6%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ADVL R+ +++G + L  TGTDEHG KI +AA   G+  K F D N+  FRD+A+V 
Sbjct: 1   MVLADVLKRWQQINGKEALLCTGTDEHGMKIQQAAAKEGMPPKEFCDNNASKFRDLAEVA 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +IS+D FIRTT++ H       W  +  +      +YKG + GWY + DE +Y +D V  
Sbjct: 61  NISHDFFIRTTDEDHKLVVEQFWLLLKTRAPEGLGLYKGQHEGWYCVSDECFYPEDLVQP 120

Query: 144 ------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G          N V+W+ E+ +FF LS Y++KLL +Y+ +P +I P  R NEV 
Sbjct: 121 SVVPQTGRKIMASIETGNEVEWVTEDTWFFPLSKYKEKLLKFYDENPNWIQPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KA 253
           ++V+  L+DLS++R      WGIK P+DP   +YVW+DAL NY+T  G+           
Sbjct: 181 NWVEHHLEDLSITRPASRLSWGIKDPEDPSNTIYVWVDALINYITKAGFGSKWQVDSADK 240

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPAD+ V+GKDI+RFHAIYWPA L++  LPLPKK+  H        K+SKSLGNV++P
Sbjct: 241 GIWPADVQVVGKDIIRFHAIYWPALLMAVGLPLPKKIVCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              ++   +D LRYFL+R  +   D  Y  D +      +L   IGNL +R        +
Sbjct: 301 FFAVQRWNLDPLRYFLMRNGSFKGDMSYANDFIIVAYEKELQANIGNLFNRISRNKTGRW 360

Query: 374 DGMIPTPGA----------FTESDESILSV---CSRVLQEIRENMQNQLIHRALAQVISL 420
             +  T  A                 +LS+        ++IR  M +  +  AL +V  L
Sbjct: 361 STLEATEFAREGKFNDIAGLAAEGPDLLSLEPTLDTAPEKIRNEMDDINLSGALREVFEL 420

Query: 421 VSEVDRYFDAQKPWELKK-TNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + E +R+     PW + K T+P+   R + V+Y + E +R   I+LQ  +P  A ++ D 
Sbjct: 421 LRETNRFISDTAPWHMVKDTSPEARVRLNWVIYRSAEALRIAGIMLQPVMPTKAGELLDG 480

Query: 477 LFVADENRCFQ 487
           L V  E R  +
Sbjct: 481 LGVKPERRTVE 491


>gi|218231128|ref|YP_002369842.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
 gi|226695274|sp|B7HD62|SYM_BACC4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218159085|gb|ACK59077.1| putative methionyl-tRNA synthetase [Bacillus cereus B4264]
          Length = 544

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 238/538 (44%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEVI---------------SFVKSGLKDLSLSRKTF-DWGIKI 220
             +Y +   F   I++  E++                +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQEQIKKVVEIVKEKGTWRDNAIQLTERYVKEGLQDRAVSRDLPIGVSIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
                  +YVWI+A+  Y + +  + +       +FW +D    +V GKD + FH++ WP
Sbjct: 243 KGYEDKKIYVWIEAVAGYYSASKHWAEETGKDDQEFWNSDAQTYYVHGKDNIPFHSVIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G++P      E    +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++   L +   N          +P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRSTLSIIKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|328776866|ref|XP_397235.3| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Apis mellifera]
          Length = 960

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 117/547 (21%), Positives = 226/547 (41%), Gaps = 41/547 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ + + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + LF +GTDE+G     
Sbjct: 258 KDEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLFISGTDEYGTATEA 317

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+    +I +D F RTT     +  +  + +I  +G I 
Sbjct: 318 KALEEKTTPQSICDKFFDIHNDIYRWFNIGFDYFGRTTTPEQTEIVQKFFLRIKSQGYIL 377

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                       + +              Y+ A G   +   + +   +      ++ + 
Sbjct: 378 SETVDQLLCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLINATDLISPRCKVCSN 437

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS----------------FVKSGLKDLSLSRKTFDW 216
           +  +    +   +      +  E +S                +++ GLK   ++R    W
Sbjct: 438 RPIIKKSEQFFLDLPKLENKLKEWLSTVENGWSGVARVVAKPWLRDGLKPRCITRD-LKW 496

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADLH-VIGKDILRFH 271
           GI +P       + YVW DA   Y++ T           K K    DL+  + KD + FH
Sbjct: 497 GIPVPIKGFENKVFYVWFDAPFGYMSITKRYTKEYEQWWKPKDIKVDLYQFMAKDNVPFH 556

Query: 272 AIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           AI +PA LL+AN      K + +  ++ ++  K SKS G  +   +  +  +  D  R++
Sbjct: 557 AIMFPASLLAANEDYILLKHLMATEYLNYEDTKFSKSRGIGVFGTDARDTGIPSDVWRFY 616

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       +D  ++   L  + N++L N  GN V+R++  + + ++  IP P    E D 
Sbjct: 617 LAYVRPETQDSNFNWVDLATKNNSELLNNFGNFVNRALVFVERYFESKIP-PIELQEDDL 675

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
            +L++  R L      M+   +   L  ++++    ++Y   Q+PW   K    +  RA 
Sbjct: 676 IVLALAQRELSSYICAMEQAKLRDGLKHILAISKHGNQYMQFQEPWVKIKGTDNDKKRAG 735

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTF 503
           T++ ++  +   L+ LL  F+P  A ++   L +A  +  +    +   L     + K  
Sbjct: 736 TIIGISCNMACLLSALLAPFMPSTARELRSQLGLATNSYGYIPDLITNILPTAHKIGKP- 794

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 795 SPLFKKI 801


>gi|224055851|ref|XP_002298685.1| predicted protein [Populus trichocarpa]
 gi|222845943|gb|EEE83490.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 121/563 (21%), Positives = 229/563 (40%), Gaps = 61/563 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 15  GKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T K   D+     R++    +IS+D+F RT+  +  + C+ ++KK+ +   + +
Sbjct: 75  AMEENSTPKQICDKYYAIHREVYKWFNISFDEFGRTSSPQQTEICQAIFKKLLENNWLSE 134

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                 Y    E +  D  V              +G   +      NP + +       +
Sbjct: 135 NSMQQLYCDTCERFLADRLVEGNCPTEGCNYDSARGDQCENCGKLLNPTELINPRCKQCK 194

Query: 169 LSA------YQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
            +       +    L   +                         +++K GLK   ++R  
Sbjct: 195 NTPRIRDTNHLFLELPLLKDKLVHYIESTSVAGGWSQNAIQTTNAWLKEGLKPRCITRD- 253

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P +     + YVW DA   Y++ T     PD  K    P ++     +GKD +
Sbjct: 254 LKWGVPVPLEEFKDKVFYVWFDAPIGYVSITS-CYTPDWEKWWKNPENVELYQFMGKDNV 312

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P+ LL         K +    ++ ++  K SKS G  +   +  +  + V+  
Sbjct: 313 PFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDAKDTNIPVEVW 372

Query: 326 RYFLVREIAC-----GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM 376
           RY+L+            D  +    L+ + N +L N +GN ++R +S + K     Y  +
Sbjct: 373 RYYLLTNRPEAILLKVSDTLFTWSDLQAKSNNELLNNLGNFINRVLSFLAKPPGSGYGSV 432

Query: 377 IPT-PGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           IP  PGA +      +     + +++  E M+   +   L   +S+ SE + Y    + W
Sbjct: 433 IPDAPGAGSHPLTNKLAEEVGKYVEQYLEAMEKVKLKHGLKTAMSISSEGNAYLQESQFW 492

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-------- 486
            L K +    S V+  ++ ++  LA LL+ F+P  + ++F  L +  E            
Sbjct: 493 RLYKEDQPSCSIVIKTSLGLVYLLACLLEPFMPSFSVEVFKQLNMPPEQASLCDEKGDMD 552

Query: 487 --QSLDQRLKPGFMLHKTFDPIF 507
             +   + L  G  +  T +P+F
Sbjct: 553 KAKRPWEILPAGHKIG-TPEPLF 574


>gi|229525645|ref|ZP_04415050.1| methionyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339226|gb|EEO04243.1| methionyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 658

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 125/521 (23%), Positives = 213/521 (40%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T    + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   +      D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           ADL N I NL SR+   I K +DG +    A  +    + +  +     I E  + +   
Sbjct: 358 ADLVNKIVNLASRNAGFITKRFDGKLSAHFAEPD----LYAEFAGAADRIAELFEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L I L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGLNLFRVLMIYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   ++ +   L         F  +F R 
Sbjct: 474 AERTEAFLN---QELTWEGVATPLT--DHAVTPFKALFNRI 509


>gi|229072522|ref|ZP_04205724.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228710498|gb|EEL62471.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 544

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 240/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R+ G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRVKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFAHLLEPFLPFSSERVRNTLSIV--NRNWE-------PQNTLPSRIDSVQPLFERI 527


>gi|150400079|ref|YP_001323846.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|187647751|sp|A6URW2|SYM_METVS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150012782|gb|ABR55234.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 663

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 139/535 (25%), Positives = 233/535 (43%), Gaps = 46/535 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL   +V    GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIFTRYLRLKRENVFHVGGTDNHGVPITLKAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT    VD+     ++  D L++S+D F RT    H +T +  +K + + G IY+   
Sbjct: 62  EGVTPLDIVDRYHNAIKEDLDSLNVSFDSFGRTHSDIHIETAQEFYKTLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  +      D  V                               Y    ++  +  
Sbjct: 122 EQFYCEKCSMSLADRYVEGKCPFCEGEARGDHCEVCGRHLEPTELLEPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           +   YFF+LSA +++L  Y  +  E   P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 KSIHYFFKLSAMKEELTEYITNAKEM--PEHVKNMALRWIEE-LHDWDVSR-NLTWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
           P     +MYVWI+A   Y++ T  L                  H IGKDI   HA++WP 
Sbjct: 238 PKSNGQVMYVWIEAPIGYVSFTKELGEIWKDYWISKDVQSKITHFIGKDITVHHAVFWPG 297

Query: 278 FLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    N  +P  V S G++  + +K+S S   V+   + +E+   D LRYFL+      
Sbjct: 298 ILKGVKNYKMPDSVVSGGYLTLENKKMSTSKNWVVWVKDFVEKFSPDYLRYFLMVNAPLN 357

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCS 395
           +D  +  D  +KR+N +L + IGN   R++    + +  +         E D  ++  C 
Sbjct: 358 RDTDFSWDDFQKRINTELIDIIGNFSHRTLVFTERKFGKIPNVQKDTLKEEDLLLIRKCE 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +  +   + ++      A+ ++I L  E + YF A +PW +  T+ +R   V+Y     +
Sbjct: 418 KTTETFDKLIREYNFKDAIMEIILLSKEGNAYFQAMQPWAI--TDEERLKEVMYTCCTTL 475

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +  LL  F+P    ++ D++         + LD  ++ G  L K    IF + 
Sbjct: 476 KYIVYLLSPFMPVKTGELLDLMN--------EELDLEIR-GNDL-KKPKVIFTKL 520


>gi|328776868|ref|XP_003249232.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Apis mellifera]
          Length = 919

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 117/547 (21%), Positives = 226/547 (41%), Gaps = 41/547 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+ + + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + LF +GTDE+G     
Sbjct: 217 KDEKNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLFISGTDEYGTATEA 276

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+    +I +D F RTT     +  +  + +I  +G I 
Sbjct: 277 KALEEKTTPQSICDKFFDIHNDIYRWFNIGFDYFGRTTTPEQTEIVQKFFLRIKSQGYIL 336

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                       + +              Y+ A G   +   + +   +      ++ + 
Sbjct: 337 SETVDQLLCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLINATDLISPRCKVCSN 396

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS----------------FVKSGLKDLSLSRKTFDW 216
           +  +    +   +      +  E +S                +++ GLK   ++R    W
Sbjct: 397 RPIIKKSEQFFLDLPKLENKLKEWLSTVENGWSGVARVVAKPWLRDGLKPRCITRD-LKW 455

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADLH-VIGKDILRFH 271
           GI +P       + YVW DA   Y++ T           K K    DL+  + KD + FH
Sbjct: 456 GIPVPIKGFENKVFYVWFDAPFGYMSITKRYTKEYEQWWKPKDIKVDLYQFMAKDNVPFH 515

Query: 272 AIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           AI +PA LL+AN      K + +  ++ ++  K SKS G  +   +  +  +  D  R++
Sbjct: 516 AIMFPASLLAANEDYILLKHLMATEYLNYEDTKFSKSRGIGVFGTDARDTGIPSDVWRFY 575

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       +D  ++   L  + N++L N  GN V+R++  + + ++  IP P    E D 
Sbjct: 576 LAYVRPETQDSNFNWVDLATKNNSELLNNFGNFVNRALVFVERYFESKIP-PIELQEDDL 634

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
            +L++  R L      M+   +   L  ++++    ++Y   Q+PW   K    +  RA 
Sbjct: 635 IVLALAQRELSSYICAMEQAKLRDGLKHILAISKHGNQYMQFQEPWVKIKGTDNDKKRAG 694

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTF 503
           T++ ++  +   L+ LL  F+P  A ++   L +A  +  +    +   L     + K  
Sbjct: 695 TIIGISCNMACLLSALLAPFMPSTARELRSQLGLATNSYGYIPDLITNILPTAHKIGKP- 753

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 754 SPLFKKI 760


>gi|13507762|ref|NP_109711.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501031|sp|P75091|SYM_MYCPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1673790|gb|AAB95779.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 512

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 165/515 (32%), Positives = 255/515 (49%), Gaps = 14/515 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y + +PHIGHA+  I+ADV+ R+ + +G +  F TGTDEHG KI   A++
Sbjct: 2   KRCYITTPIYYASGKPHIGHAFTTILADVIKRYKQQNGYEAYFLTGTDEHGNKIESKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + FVDQN   F+ M   LDI++D FIRTT+  H    +  ++ + DKG IY+  +
Sbjct: 62  LGLDPQTFVDQNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQHAFQLLYDKGLIYQSNW 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E  Y   +         +      +  ++E   F      +D +     ++ 
Sbjct: 122 EGAYCVECEQNYFTYDKQTMLCEIGHQ-----LTLVQEPSLFIAFKDSKDWIGEMIATNK 176

Query: 185 EFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
             I P  R  E   +F+  GL DL+L+R+   WGI +P D +  +YVW DAL NY+T  G
Sbjct: 177 LNITPESRAAELKNNFLDGGLNDLALTRQNVTWGIPVPFDNKQTIYVWFDALFNYITNLG 236

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  N       +   D     +H+I ++I RFH IYWP FL      LP +  SHG+I+ 
Sbjct: 237 FAHNDPKFNKWWNNNDEEHEVIHLISREITRFHCIYWPIFLHQLGFKLPTQFLSHGWIVD 296

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGNVI P E++ + GVD  RY L++E+   KD        K   NADLAN 
Sbjct: 297 GNGHKMSKSLGNVISPEELLAQFGVDGTRYCLLKEMRLDKDNRCSMAIFKDIYNADLANS 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GN  SR+  MI K   G +          + ++   ++ + +      N   ++ +  +
Sbjct: 357 FGNHASRTFGMIKKYLGGQLDFIEVQDPQVKQLMDQANQAMVQFDTAWNNFQFYKGINGL 416

Query: 418 ISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV +  +  D  KPWEL K T+      +L+  V   +   +LL   +   + +IFD+
Sbjct: 417 LQLVFQASKLIDQLKPWELVKQTDYTLLKQLLFACVRCTQVCFVLLAPILVHTSTQIFDL 476

Query: 477 LFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
              + + R    L D +      L     P+F R 
Sbjct: 477 FNFSAQARSKTHLADPQQLQKISLAPVIQPLFKRL 511


>gi|110598424|ref|ZP_01386696.1| methionyl-tRNA synthetase:methionyl-tRNA synthetase, beta subunit
           [Chlorobium ferrooxidans DSM 13031]
 gi|110339958|gb|EAT58461.1| methionyl-tRNA synthetase:methionyl-tRNA synthetase, beta subunit
           [Chlorobium ferrooxidans DSM 13031]
          Length = 702

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 134/565 (23%), Positives = 243/565 (43%), Gaps = 60/565 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G D+L   G+DEHG  I 
Sbjct: 1   MSHFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYKRLKGEDILHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+  R   D      IS+D + RT+   HH T +  + +I  KG  
Sbjct: 61  ITAEREGISPQDVVDRYHRMNLDAFRKCAISFDYYGRTSSATHHATAQEFFTEIEHKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            K     ++  + + + +D  V             G   +      +P++ +  +     
Sbjct: 121 NKKTEKLFFDRKADRFLSDRYVTGTCPICNNPEANGDQCEQCGTHLSPLELINPKSKLSD 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     ++F L  +Q +L +Y  SH +        N   +++K GL D +++R   
Sbjct: 181 ETPELRDTMHWYFPLGRFQPQLEAYVNSHEDEWR-SNVVNYSRTWLKQGLNDRAITRD-L 238

Query: 215 DWGIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVI 263
           +WGIK+P D       ++YVW DA+  Y++ T           + K +  D     +H I
Sbjct: 239 NWGIKVPLDSAEAEGKVLYVWFDAVLGYISFTREWAQEQGSPDRWKEYWQDPESRLVHFI 298

Query: 264 GKDILRFHAIYWPAF-------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +PA         +     L   V +  F+  +G K SKS    +   E 
Sbjct: 299 GKDNVVFHTLMFPAILMAWNEGRMEGCYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+   D LRY +       KD  +     + R N +LA+ +GN + RS+      +DG 
Sbjct: 359 LEKFPADTLRYSIAMNYPENKDTDFSWLDFQNRTNGELADTLGNFIKRSIDFTNARFDGE 418

Query: 377 IPTPGAFTESDES--ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +P    F   DE   I      +L ++    +      AL+  + +    +R+    +PW
Sbjct: 419 VPYACTF---DEWNTIGIDWQELLSQLDLAFEQFHFRDALSLGMEMARAANRFLTEAEPW 475

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF----QSLD 490
           ++ K++ + A+  + +++ +   LA+ L   +P  +N+I+ +L  +           SL 
Sbjct: 476 KVIKSDREEAAKTMALSLNLCHALAVALYPVIPGTSNRIYAMLGFSGTIDDLLTHGHSLS 535

Query: 491 QR-----LKPGFMLHKTFDPIFPRF 510
           +      L+ G  L    + +F + 
Sbjct: 536 ESLLRPMLEKGHRLRGDSEILFTKI 560


>gi|77747505|ref|NP_297839.2| methionyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 690

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 129/538 (23%), Positives = 210/538 (39%), Gaps = 43/538 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+
Sbjct: 5   LVTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGM 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F+     +        ++++D +  T    +       +  +   G I     + +
Sbjct: 65  PPEAFIATTQASHERDFAAFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 124

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QWMEE 162
           Y      +  D  V             G + +   A ++P               +  + 
Sbjct: 125 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGTTPELRDS 184

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF ++ +   L  +            +  E +   K GL+   +SR    +G +IP+
Sbjct: 185 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLD-AKGGLRPWDISRDAPYFGFEIPN 243

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L            ++       H IGKDI+ FHA++WP
Sbjct: 244 QPGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWP 303

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR-EIA 334
           A L       P ++  +G++   G K+SKS G  I         +  DALRY+       
Sbjct: 304 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSG 363

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVNADL   + NL SR  S I   ++G +    A T  D       
Sbjct: 364 DVDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDQF 419

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
              L  IR+  +      A+ Q + L  E ++Y D  KPW + K +    +   V    +
Sbjct: 420 VAALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQHNADAQLHAVCTQGL 479

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P  +  I    F+A     +Q ++Q L  G  +H  + P+F R 
Sbjct: 480 NLFRVLITALKPILPHTS--IQAETFLAAPVTAWQDVNQPLIGGHTIH-PYSPLFTRI 534


>gi|217962514|ref|YP_002341086.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229142350|ref|ZP_04270869.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|226695275|sp|B7HVW2|SYM_BACC7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|217064569|gb|ACJ78819.1| putative methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228641120|gb|EEK97432.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 544

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEVI---------------SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+   E +                +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQTGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFLYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I     LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFVNLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 527


>gi|52218647|dbj|BAD51240.1| methionyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 654

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 128/518 (24%), Positives = 226/518 (43%), Gaps = 35/518 (6%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
           A   + AD+  R+ RL   DVLF  G+DEHG  I   A+  G+T +  VD+     +   
Sbjct: 2   AGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGITPQDVVDRYHFLIKKSF 61

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-- 142
           +   IS+D + RT+ K HH+     +KK+ +KG+  +     +Y      +  D  +   
Sbjct: 62  EEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFIEKTSEQYYDEEAHQFLADRYITGE 121

Query: 143 ---------KGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                     G   +      +P                  E + ++  L  ++  L  +
Sbjct: 122 CPHCHSEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVMKETKHWYLPLDKHETWLRQW 181

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTN 237
                +   P     +  S++  GL+  ++SR   DWGI +P +     ++YVW DA   
Sbjct: 182 ILEEHKEWRPNVY-GQCKSWLDMGLQPRAVSRD-LDWGIPVPVEGAEGKVLYVWFDAPIG 239

Query: 238 YLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHG 294
           Y++ T  L           P    +H IGKD + FH I +PA      +  LP  V S+ 
Sbjct: 240 YISNTKELLPDSWETWWKDPETRLVHFIGKDNIVFHCIVFPAMLKAEGSYILPDNVPSNE 299

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           F+  +G+KIS S    +   E +E+     D LRY L       KD  +     + R N 
Sbjct: 300 FLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYVLTANAPETKDNDFTWKDFQARNNN 359

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L    GN V+R++ +  K ++G +P  G  T+ D+  L   S V  E+ + +       
Sbjct: 360 ELVAVYGNFVNRAMVLTQKYFEGKVPAAGELTDYDKETLKEFSDVKAEVEKLLNVFKFRD 419

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A  + ++L    ++Y    +PW+L KT+ +R  T+L ++++++  LAI  + F+P  + +
Sbjct: 420 AQKEAMNLARIGNKYLADTEPWKLAKTDMERVGTILNISLQLVANLAIAFEPFLPFSSER 479

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +  +L +   +      +  L  G  L+K  + +F + 
Sbjct: 480 LRQMLNMDSFDWAELGRNDLLPAGHQLNKP-ELLFEKI 516


>gi|229187283|ref|ZP_04314428.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|228596293|gb|EEK53968.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 544

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             ++  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRNTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+ + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 ERLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + +I + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERIRNTLSIV--NRNWE-------PQHTLPTRIDSVKPLFERI 527


>gi|52630188|gb|AAU28929.1| methionyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 693

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 231/543 (42%), Gaps = 45/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 24  MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 84  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 143

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 144 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGV 203

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    
Sbjct: 204 SPVEKESEHYFFDLPRYEELLKDWTRKG---HLQTEVTNKLSEWFEAGLKQWDISRDAPY 260

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFW-----PADLHVIGKDILR 269
           +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ 
Sbjct: 261 FGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVY 320

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+ 
Sbjct: 321 FHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYF 380

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + D    RVNADL   + N+ SR    I K +D  + +      +D+
Sbjct: 381 AAKLNGRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS----ELNDQ 436

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
            + +      + + +   ++   RA+ Q++    +V++Y DA KPW L K          
Sbjct: 437 KLYNDLLSARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 496

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +A    + L    E   + S+D+ L        TF P+
Sbjct: 497 ICTMGINLFRILITYLKPVLPMMAKASEEFLN--SEPLHWDSIDKPLL--NHRINTFKPL 552

Query: 507 FPR 509
             R
Sbjct: 553 MVR 555


>gi|12044871|ref|NP_072681.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660383|ref|ZP_05405792.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351165|sp|P47267|SYM_MYCGE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3844630|gb|AAC71237.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079081|gb|ABY79699.1| methionyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 512

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 171/515 (33%), Positives = 274/515 (53%), Gaps = 16/515 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y + +PHIGHA+  I+ADV+ RF   +G +     G+DEHG KI   A++
Sbjct: 2   KRCYITTPIYYASGKPHIGHAFTTILADVIKRFKIQNGYEAFLLVGSDEHGNKIESKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  K FVD N++ F+ M   L+IS+D FIRTT++ H    +  ++ + DK  IY+  +
Sbjct: 62  LNLDPKTFVDINAQAFKLMWKTLNISFDHFIRTTDEIHKQQVQKTFQDLYDKKLIYQSEW 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E  Y                 HN +  ++E  +F   S+ ++ + +    + 
Sbjct: 122 KGAYCVECEQNY----FTFNKQTMLCEIGHN-LSLVQEPCWFISFSSTKNWIETTIGKNQ 176

Query: 185 EFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
             I+P  R +E   +F+ +GL DL+L+RK   WGIK+P DP   +YVW DAL +Y+T  G
Sbjct: 177 LNIIPKSRASELKNNFINNGLNDLALTRKNVTWGIKVPFDPNQTIYVWFDALFSYITNLG 236

Query: 244 YLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +  N D +  K+W  D      +H+I ++I RFH IYWP FL   ++ LP +  SHG+I+
Sbjct: 237 F-RNGDPNFIKWWNNDNKEREVIHLISREITRFHCIYWPIFLHLLDIKLPTQFLSHGWIV 295

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSL NVI P ++I++ GVD  RY L++E+   KD       LK+  NADLAN
Sbjct: 296 DGEGRKMSKSLNNVISPEQLIDQFGVDGTRYCLLKEMRLDKDNRCSVSILKEIYNADLAN 355

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             GN VSR+  MI K  +G +        + + I+ +    + +      +   +RA+  
Sbjct: 356 SFGNHVSRTFGMIKKYLNGKLEYQIITDNALQKIMILIDESIVQFDHYFNSYEFYRAINL 415

Query: 417 VISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++ +V E+ +  D  KPWEL K         +L+  V  ++   +LL   +   A+K+F 
Sbjct: 416 LLKIVFELSKLIDDFKPWELFKNQEFSLLKQLLFTCVRCVQVCYVLLTPILVNTASKVFH 475

Query: 476 ILFVADEN-RCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +   AD+  R  Q  D  L    ++  + + +F R
Sbjct: 476 LFNFADDACRKDQLRDATLLKKIIISNSMEVLFKR 510


>gi|302348036|ref|YP_003815674.1| Methionyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328448|gb|ADL18643.1| Methionyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 576

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 233/542 (42%), Gaps = 39/542 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +++A  Y N  PH+G    ++ ADV AR+ +L G DV+F TG+DEHG  I   A+  
Sbjct: 3   KYIVASAWPYSNFIPHLGTVLHLLSADVYARYLKLMGHDVVFVTGSDEHGTPIELEARKR 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  K   DQ      ++    +  +  + RT    H +  R  +  +  +G ++     
Sbjct: 63  GIKPKELTDQVHAYDVELFKKFEFDFSLYSRTESPIHKEFVREFFLNLQRRGYVFPQDEE 122

Query: 126 GWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y   D+ +  D            E  +G           P   +         +    
Sbjct: 123 MPYCPNDKMFLPDRFIEGTCPYCGYEHARGDQCDNCGRLLTPRDLINPRCAICGATPIWL 182

Query: 175 KLLSYYE-----------SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIP 221
           K  +YY                  L    +N  I +VK GLK  +L+R   +WGI     
Sbjct: 183 KTTNYYIDLGKVQEKLLSWLQSSELQDSVKNYSIEWVKQGLKPRALTRD-IEWGIQAPFE 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPAD-----LHVIGKDILRFHAI 273
                 +YVW DAL  Y++ T         D +  K W  D     ++ IGKD + FH+I
Sbjct: 242 GAENKTIYVWFDALLGYVSATKEYLMSKGGDENSWKQWWFDPSTRSVYFIGKDNIPFHSI 301

Query: 274 YWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
             P+  +++  P   P ++ +  ++L++G   SKS    +   E +E    D  R+ L+R
Sbjct: 302 ILPSLFMASGDPYVLPWRISATDYLLYEGRHFSKSRRVGVWIDEALEIAPADYWRWALIR 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +      + VN++L + IGNL  R +S +   +DG++P   A    D+  L
Sbjct: 362 MRPESGDVSFQWKEFYRIVNSELNDDIGNLAYRVLSFVKSRFDGVMPPATAPDTRDKETL 421

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              + +  ++ E+M N  + RA   V+ +    +RY +   PW+L K + +RA TV+ V 
Sbjct: 422 EEATSLASKVIEHMDNVELKRASEFVLEVARLGNRYLNESAPWDLIKRDRERAGTVINVA 481

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLHKTFDPIFP 508
             +++ +A L+  F+P +A  ++  L       + +  ++L + +  G  + +   P+F 
Sbjct: 482 ASIVKTVAHLITPFMPSIAEDLWHQLGFTGSVMDAKWPENLGKPISGGSRIGE-IHPLFR 540

Query: 509 RF 510
           + 
Sbjct: 541 KL 542


>gi|50557232|ref|XP_506024.1| YALI0F29843p [Yarrowia lipolytica]
 gi|49651894|emb|CAG78837.1| YALI0F29843p [Yarrowia lipolytica]
          Length = 750

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 112/548 (20%), Positives = 214/548 (39%), Gaps = 41/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ Y N  PH+G+    ++ ADV +R+ +    + LF  GTDE+G    
Sbjct: 190 VPGQRNILITSALPYVNNVPHLGNIIGSVLSADVYSRYCKGRNYNALFICGTDEYGTATE 249

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    VT K   D+  +  +D+ D   I +D F RTT  +  +  + ++ K+ D G +
Sbjct: 250 TKALEEKVTPKELCDKYHKIHKDVYDWFQIGFDYFGRTTTDKQTEIAQDIFMKLHDNGYL 309

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
                +  Y  +  A+  D  V            +G          NP + ++       
Sbjct: 310 EAQKMTQLYCTQHNAFLADRFVEGICPKCGYEDARGDQCDGCGTLLNPFELIKPRCKLDG 369

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKT 213
                R S +    L   +                S         ++ + L    ++R  
Sbjct: 370 SSPEVRDSEHIFLSLDKLQKETVEWAQESAEKGDWSKNSRTITDGWLNNELHPRCITRDL 429

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +     ++YVW DA   Y++ T      +       P ++     +GKD +
Sbjct: 430 V-WGTPVPLEGFKNKVLYVWFDATIGYVSITANYSPENWKAWWNNPENVDLYQFMGKDNV 488

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +PA LL    P  K   + +  ++ ++G K SKS G  +      +  +     
Sbjct: 489 PFHTVIFPATLLGTKQPWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAQDTGISPSVW 548

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L+       D  +  D    R N++L   +GN V+R +      Y+G++        
Sbjct: 549 RYYLLSARPESSDTQFSWDDFVARNNSELLANLGNFVNRVIKFSNAKYNGVVADFSTSEL 608

Query: 386 SD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
            D    + +    +L +    M+N  +  A    +++ S  +++    K    L   +P 
Sbjct: 609 GDTFTLLKADVDGLLTKYNTLMENTKLKSAQDTAMAISSRGNQFLQDNKLDNSLFADHPA 668

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           +++ V+ V + +I  ++ ++  F+P+ A  I   L  A   R        +  G  + K 
Sbjct: 669 KSAAVVGVALNLIHLVSAVIAPFMPETAESIDKQLN-APARRIPDEFTIDILGGHHIGKA 727

Query: 503 FDPIFPRF 510
              +F R 
Sbjct: 728 AY-LFKRI 734


>gi|317418796|emb|CBN80834.1| 'Methionyl-tRNA synthetase, cytoplasmic' [Dicentrarchus labrax]
          Length = 861

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 110/535 (20%), Positives = 214/535 (40%), Gaps = 70/535 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  L +++A+ Y N  PH+G+    ++ ADV +R+ RL G ++LF  GTDE+G     
Sbjct: 264 EGKRNLLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWNMLFVCGTDEYGTATEN 323

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +   D+       +     I +D F RTT ++  +  + ++ ++     + 
Sbjct: 324 KAREEGLTPQQICDKYHAIHSSIYKWFQIDFDFFGRTTTEKQTEIAQNIFWRLHKHDFLV 383

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +           + +  D  V            +G          N V+  E +    R 
Sbjct: 384 EDTVEQLRCESCQRFLADRFVEGTCPHCSYPEARGDQCDKCGRLINAVELREPQCKVCRQ 443

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +                  P+ R ++ +                         D   + Y
Sbjct: 444 T------------------PVIRSSKHL-----------------------FLDLPKVFY 462

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSA--NL 284
           VW DA   YL+ T         K    P  +   + + KD + FH++ +P  LL A  N 
Sbjct: 463 VWFDAPIGYLSITA-NYTDKWEKWWKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNY 521

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDK 343
            L   + +  ++ ++  K SKS G  +      +  +  D  R++L+     G+D  +  
Sbjct: 522 TLVNHLVATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSW 581

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +  + N++L N +GN ++R+   + K ++G +P      + D+ +L++    LQ+  +
Sbjct: 582 ADMATKNNSELLNNLGNFINRAGMFVTKFFEGCVPAI-ELQQEDKKLLALVGWELQQYIQ 640

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAI 460
            M    I  AL  ++++    ++Y    +PW+  K       RA TV  ++V +   L++
Sbjct: 641 LMDKVKIRDALKHILNISRHGNQYIQVNEPWKKIKGGDIERQRAGTVTGLSVNIACLLSV 700

Query: 461 LLQAFVPKLANKIFDILFVADE--NRCFQSLDQ---RLKPGFMLHKTFDPIFPRF 510
           +L  ++P ++  I D L       N   Q        L  G  +  T  P+F + 
Sbjct: 701 MLFPYMPTVSQTIRDQLNAPQSCINAMLQGTGTFVCALSAGHRVG-TVSPLFQKL 754


>gi|167386989|ref|XP_001737980.1| methionine-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165899002|gb|EDR25712.1| methionine-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 753

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 118/539 (21%), Positives = 230/539 (42%), Gaps = 41/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G     ++ ADV AR+ R+ G + L+  GTDE+G    + A 
Sbjct: 14  RNILITSALPYCNNVPHLGTLIGCVLSADVYARYCRMRGYNTLYVCGTDEYGTTTEQKAL 73

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   D+     +++ D  DIS++ F RT+ ++  +  + ++K +++ G IYK  
Sbjct: 74  LEHCTPQEICDKYYTLHKEVYDWFDISFNYFGRTSTEKQTEITQDIFKHLNNNGYIYKES 133

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFF----- 167
              +Y  + + +  D  V            +G          N V+ +  +         
Sbjct: 134 VEQFYCEKCDKFLADRFVEGICPFCNAPGARGDQCDSCQKLINTVELINPQCKVCHSVPV 193

Query: 168 -RLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            R S +    L   +              E  N      K+ L +L     T    WG K
Sbjct: 194 RRSSEHLFIDLPKLQDKLGNWANETMSKYEWPNNCACATKTWLNNLKGRCITRDLKWGTK 253

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI-----GKDILRFHA 272
           +P +     + YVW DA   YL+      N      K+W  + HV      GKD + FH+
Sbjct: 254 VPLEGFENKVFYVWFDAPIGYLSI---TANYTDDWKKWWMDNEHVELTQFLGKDNIVFHS 310

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P+ LL    P    +K+ +  ++ ++  K SKS G  +   + ++  +  +  RY+L
Sbjct: 311 VLFPSTLLGTGQPWTMVRKLATTEYLNYEDCKFSKSNGTGVFGDDAMKTGIPPEVWRYYL 370

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
           +       D  +  + L ++ N +L   IGNL  R+++  +K++D  IP      TE + 
Sbjct: 371 LINRPEQSDTVFLWNDLMEKNNNELLKNIGNLAQRTLTFAVKNFDNKIPKKINKITEVEL 430

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +       + +E    M+N  +   L   +S+ S  ++Y      W+  K++ +RA+  +
Sbjct: 431 NCEKEIKELYKEYLNAMENVKLKEGLKIAMSISSVGNKYLQDTAAWKTIKSDKERAADEI 490

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           Y  + ++  ++++L  ++P+   K+ + + +        +    L  G  +    + IF
Sbjct: 491 YYALNILYFVSLVLDPYIPEFGKKVREQMNLP--AIPLPNDFGLLLEGETMLGKVEVIF 547


>gi|228961279|ref|ZP_04122898.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798400|gb|EEM45394.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 544

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 236/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E+       +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEITKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + Y     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKYWAEETGKDDQEFWDREAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKRSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|42523229|ref|NP_968609.1| methionyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|68565985|sp|Q6MMA3|SYM_BDEBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|39575434|emb|CAE79602.1| metG [Bdellovibrio bacteriovorus HD100]
          Length = 687

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 131/526 (24%), Positives = 225/526 (42%), Gaps = 41/526 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++ K+ I+ A+ Y N   H+GH  E + AD  ARF  + G + +F    D HG  I  
Sbjct: 1   MNDKRKILITCALPYANGYIHLGHLVEYLQADFWARFQNMRGNECVFICADDTHGTPIMV 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  + Q+ +          + +  F  T  + +   C   +KK+ +     
Sbjct: 61  KARELGITPEALIAQSYKEHTQDFADFQVQFSHFGSTNSEENRLLCEYFYKKMQEGNHTR 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHN 155
                  Y   D+ +  D  V                                + +    
Sbjct: 121 SQPIQQMYCNHDKMFLPDRFVKGTCPKCGAKEQYGDSCDVCASTYSPSDMKDVHCSLCGT 180

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E  FF+L+ ++  L  +   H       E   +++ +    LKDL +SR    
Sbjct: 181 APVMKDSESIFFKLNDFKQYLEEWIPKHCS----PEISKKMLEWFNEDLKDLDISRDEPY 236

Query: 216 WGIKIP-DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G  IP  + +   YVW+DA   Y++TT       G   K    D      H IGKDI R
Sbjct: 237 FGFAIPGTNNKKFFYVWVDAPMGYMSTTEQWAKSQGKTLKDIWQDPSREIYHFIGKDIAR 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH I+WPAFL +A    P +VF HG ++  GEK+SKS G  I     +  +  + LRY+ 
Sbjct: 297 FHTIFWPAFLKAAEFRSPNQVFVHGHLMVNGEKMSKSKGTFIAARTYLNHLNPEYLRYYY 356

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +  +   D   + +    RVN++L   I NL SR   M+ K  DG +  P A     +
Sbjct: 357 STKLSSSVDDIDLNLEDFTNRVNSELVGKITNLGSRGGQMLKKKMDGKMSVPDAEG---K 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            ++    +  + I  + + +   +AL ++  L  + ++YFD + PW+  + +P+    V+
Sbjct: 414 KLIEHAQKTAESIAAHYEARDFAKALGEIRGLADDANKYFDEKAPWKTLEADPEGTKQVI 473

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             T+ + R LAI L+  +P  + K+  +L   +++  +  L+  L 
Sbjct: 474 TTTLNMFRMLAIYLKPVLPFYSQKVAKLLG--EKDYVWSDLNTVLT 517


>gi|25009404|sp|Q9PFV8|SYM_XYLFA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|9105408|gb|AAF83359.1|AE003902_4 methionyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 702

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 129/538 (23%), Positives = 210/538 (39%), Gaps = 43/538 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+
Sbjct: 17  LVTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGM 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F+     +        ++++D +  T    +       +  +   G I     + +
Sbjct: 77  PPEAFIATTQASHERDFAAFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QWMEE 162
           Y      +  D  V             G + +   A ++P               +  + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGTTPELRDS 196

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF ++ +   L  +            +  E +   K GL+   +SR    +G +IP+
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLD-AKGGLRPWDISRDAPYFGFEIPN 255

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L            ++       H IGKDI+ FHA++WP
Sbjct: 256 QPGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR-EIA 334
           A L       P ++  +G++   G K+SKS G  I         +  DALRY+       
Sbjct: 316 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSG 375

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVNADL   + NL SR  S I   ++G +    A T  D       
Sbjct: 376 DVDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDRIQYDQF 431

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
              L  IR+  +      A+ Q + L  E ++Y D  KPW + K +    +   V    +
Sbjct: 432 VAALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQHNADAQLHAVCTQGL 491

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P  +  I    F+A     +Q ++Q L  G  +H  + P+F R 
Sbjct: 492 NLFRVLITALKPILPHTS--IQAETFLAAPVTAWQDVNQPLIGGHTIH-PYSPLFTRI 546


>gi|229076419|ref|ZP_04209383.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228706706|gb|EEL58915.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 544

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 132/538 (24%), Positives = 236/538 (43%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKT-FDWGIKI 220
             +Y +   F                 R N +     +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQKGTWRDNAIQLTERYVKEGLQDRAVSRDLPVGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + +  + +       +FW       +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWIPDILESYDPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG++P      E    +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGVVPKGTIHVE----LKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + +E+   ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  V +I
Sbjct: 419 GLYKEVGAAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRNTLSIV--NRNWE-------PQNTLPNKIDSVQPLFERI 527


>gi|229087542|ref|ZP_04219674.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228695789|gb|EEL48642.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 544

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 126/536 (23%), Positives = 233/536 (43%), Gaps = 43/536 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHVASLLPGDILARYYRAKGEKVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D     F+     L  +YD + RT  + HH+T + ++ ++ ++  IYK     
Sbjct: 63  VTAKEIADHYHEEFQRCFQHLGFTYDCYTRTDTQHHHETVQKIFLRLLEEDFIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEPSRGDQCDACSAILDPLDLLEKKCKLCGNTPAVKET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTF-DWGIKI 220
             +Y +  +F                 R N V     +++ GL+D ++SR       I +
Sbjct: 183 EHFYFALHKFHEQIKDAVATAKQKRTWRDNAVQLTERYLQEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWP 276
                  +YVWI+A++ Y + +  + +       +FW + +   +V GKD + FH+I WP
Sbjct: 243 KGYEDKKIYVWIEAVSGYYSASKRWAEEAGKDDGEFWSSSVKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTTNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG +P        +  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGH----VNLKLKEKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +   +   ++      AL  +   V   ++YFD Q PW+ ++ +P      +Y  V  I
Sbjct: 419 ELYSSVGNAIEQAHFKVALETIFETVRFANKYFDEQAPWKQREEDPAACEETIYTCVYFI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
              A LL+ F+P  + ++ ++L + +    C  +L +R        K   P+F R 
Sbjct: 479 VNFAQLLEPFLPFSSERVRNMLAITNAGWKCESALPER-------VKGVQPLFERI 527


>gi|228955300|ref|ZP_04117308.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804433|gb|EEM51044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 544

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLIDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++       E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVTKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFAHLLEPFLPFSSERVRNTLSIV--NRNWE-------PQNTLPSRIDSVQPLFERI 527


>gi|229193317|ref|ZP_04320267.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228590118|gb|EEK47987.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 544

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 238/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +   ++ 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKRTVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWVEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + +++ E ++      AL  V   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKQVGEAIEQTKFKVALETVFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFAHLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|58258053|ref|XP_566439.1| methionine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57222576|gb|AAW40620.1| methionine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 582

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 172/500 (34%), Positives = 258/500 (51%), Gaps = 19/500 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAA 62
           +  Y++T I Y NA PH+GH + +++ DVLARF RL      V+F TGTDEHG KI +AA
Sbjct: 51  KPFYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTDEHGLKIQQAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GV  + F D  S+ FR +A + + S  DFIRTTE RH       W  +   GDIYKG
Sbjct: 111 KANGVGEQEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKG 170

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            +SGWYS+ DE++Y   +V K  +          N V W EE  + FRL  ++  L  + 
Sbjct: 171 THSGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEETNWKFRLGRHKKVLEKWL 230

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                      R + +          +S       W I +P DP+  +YVW+DAL NY+T
Sbjct: 231 SQPESVHPNTVRLDLLRQLSSLEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     ++  WPAD+HV+GKDI++FHA++WP+ L SA+LP PK++ +H       
Sbjct: 291 VLGYPDWEGKGESVGWPADVHVVGKDIIKFHALHWPSLLHSASLPAPKRIIAHAHWTMSH 350

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANGIG 359
            K+SKS GNV+DPI  + + G D +R++L+R       D  Y+     +     LA+ +G
Sbjct: 351 TKMSKSRGNVVDPISAMTQWGEDGVRWYLMRVGGGLVDDADYNPAE-VEVHYRLLADQVG 409

Query: 360 NLVSR-----SVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           NL+SR      +    +++D     T     + DE +  + +R+ +E    M+   + +A
Sbjct: 410 NLLSRISGAKVLKKAEREFDWGNEKTRDRGEDRDEELDGMMARMREEFEGKMEVFGVSQA 469

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLAN 471
            A V+ +V   ++ F +  PW      P   S+V  +T     +R  AILLQ  +P  A 
Sbjct: 470 CAGVMDVVMATNKLFTSLAPWS-----PSTPSSVPALTYAYHALRLSAILLQPIIPAKAG 524

Query: 472 KIFDILFVADENRCFQSLDQ 491
           +  D L V  E R +   + 
Sbjct: 525 EALDRLGVPAEERSWVDAEW 544


>gi|315501788|ref|YP_004080675.1| methionyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315408407|gb|ADU06524.1| methionyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 600

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 142/526 (26%), Positives = 229/526 (43%), Gaps = 62/526 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A   GVT 
Sbjct: 8   VAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADAEGVTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   D+ +R   +    L +SYD F RTT + H+   + L+  +   G I      G   
Sbjct: 68  RELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFTGLHRNGYIVPKVTIGAIS 127

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         +  +G        Q +P+              +++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPIDLIDPKSKINGETPEFVETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A  D L  + ++   +   + R +  +      L+  +++R   +WG+ IP D 
Sbjct: 188 FFLDLPALADALRQWLDTRDGWRPNVLRFSRNLL---DDLQPRAITRD-LEWGVPIPLDD 243

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------LHVIGKDIL 268
               P   +YVW DA+  YL+ +       G      K+W AD         + +GKD +
Sbjct: 244 WRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWRKWWSADGEGKDARSYYFMGKDNI 303

Query: 269 RFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH++ WPA                    L LP +V S  ++  +G K S S   VI   
Sbjct: 304 VFHSVIWPALLGGYSGEGARDGEPGELGRLNLPTEVVSSEYLTMEGRKFSSSRKVVIYVR 363

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E    DALRYF+        D  +      +R N +L  G GNLV+RSVSM  K++ 
Sbjct: 364 DFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSVSMAAKNFG 423

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            + P  P   TE+D+++L +       + + +      +A+ + + +V+E ++Y   Q P
Sbjct: 424 AIPPVDPAGLTEADQALLDIAKAGFATVGDLIARHRQKQAIGEAMKVVAEANKYLSEQAP 483

Query: 434 WELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+LK  +   R  TVL+V ++V+     LL  F+P  A KI ++L 
Sbjct: 484 WKLKGEDEKPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHELLG 529


>gi|294494856|ref|YP_003541349.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665855|gb|ADE35704.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 680

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 116/539 (21%), Positives = 217/539 (40%), Gaps = 43/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N   HIGH    I AD+  R  +  G +V F  G+D HG  I   A+ 
Sbjct: 8   KPILVTCGLPYANGMAHIGHLRTYIPADIFVRSLKKMGHEVTFVCGSDTHGTPIVFNAEE 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              T +  + +   +F +    + I +D F  T +  +H+    +  ++ +   +Y    
Sbjct: 68  QNTTPQALIKKYHSHFDETFKSMGIEFDAFGTTDDPTNHNRTHDIVNRLIENDYVYPKTI 127

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y      +  D  V                                         ++
Sbjct: 128 EIAYCAGCNRFLPDRYVEGECPHCAESARGDECDQGCGKHLEPGELKNPVCTICGGVAEY 187

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E+E +FF+LS + D LL Y             RN  + +VK GL D  ++R   +WG+K
Sbjct: 188 KEQEHFFFKLSQFNDYLLEYL---DRLDGTSNARNYALGWVKQGLDDWCITR-NLEWGVK 243

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T    N  G   + +  D    +H IG DI+  H I+ 
Sbjct: 244 FPGRDDLVVYVWVDAPIGYIAFTEEWANATGDSWEKYWKDDGEIVHFIGGDIIYHHCIFL 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A       V + G +  + +  SKS G V+   +  + +    D LRY+L    
Sbjct: 304 PAMLKGAGYSPASSVVASGMVKIENKTFSKSRGYVVWVGDDYMQQGFHQDLLRYYLASYT 363

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  K+  +     +++ N +L    GN + R++    K++  +        + D+ ++  
Sbjct: 364 SHTKELNFSWKVFQEKTNTELVGVFGNFLYRTLLFAYKNFKAIP-----EGKLDDEVMET 418

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               + E  E M+     +    V++L S  + YF +++PW L K + +    VL   ++
Sbjct: 419 IQNTIDEASEAMEKYEFKKYADSVMTLASYGNIYFQSREPWNLIKEDKEECGRVLKNCMQ 478

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + L +L +  +P+ A   +  L +  +     +      ++ G  L+K    +F + 
Sbjct: 479 IGKALTLLYEPLIPEKAGNAWKQLGMESDVHTALYSQGTVPVESGTSLNKP-SILFKKI 536


>gi|220931388|ref|YP_002508296.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782868|sp|B8D274|SYM_HALOH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219992698|gb|ACL69301.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 540

 Score =  312 bits (800), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 132/534 (24%), Positives = 237/534 (44%), Gaps = 39/534 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+GH   ++  D+LAR+ RL G  VL+ +G+D HG  IA  A+  
Sbjct: 2   NVFIGGAWPYANGSLHLGHIASLLPGDILARYFRLKGEKVLYVSGSDCHGTPIALRAKRE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G + ++  ++  + F+     L  SYD++ +T    HH   + + KK+ +KG IYK    
Sbjct: 62  GESPRIIAERYHQEFKKTFTKLGFSYDNYTKTDNPFHHQVVQSIIKKLFEKGYIYKKQTK 121

Query: 126 GWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             Y  + + +  D  V           +G    Y ++   P    E+       S     
Sbjct: 122 QLYCSKCQQFLPDRYVEGICPVCGKVVRGDQCDYCSSLIEPTDLEEKRCKICGSSPVIKN 181

Query: 176 LLSYYES------------HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
              +Y +                            +++ GL+D +++R   +WG+ IP +
Sbjct: 182 TEHFYLALSEFSDELKRLLDNNRGWRDNAIKLSTRYIEEGLQDRAITRD-LNWGVSIPFE 240

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD---LHVIGKDILRFHAIYWPA 277
              +  +YVWIDA+  YL+ +       G   + FW  D    +V GKD + FH +  PA
Sbjct: 241 GYEEKRIYVWIDAVLGYLSASKEWSRHTGEPWQNFWSEDTKTYYVHGKDNIPFHTLILPA 300

Query: 278 FLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L  A +  +P+K+ S  ++  +G+K+S S    +   ++++    D++RYFL+      
Sbjct: 301 LLRGAGIKQIPEKIVSSEYLTIEGKKLSTSRNWAVWLPDMLKNYQPDSIRYFLIINGPEK 360

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  +  +      N +L    GN V+R++  I K Y+G+IP      + +E I      
Sbjct: 361 KDSNFSWEEFIHSHNGELLGAYGNFVNRTLVFIEKYYNGLIPD----GKLNEKIKEKIET 416

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   +   ++   +  AL  + + V E ++YFD+++PW   K +       +Y  V++I 
Sbjct: 417 LYHRVGNKIEKTNLKNALEVIFNFVREANKYFDSEEPWITVKEDKGTCKDTIYTCVQIIA 476

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L  LL  F+P  + K+   L +   +  +  +     P   L K  + +FPR 
Sbjct: 477 NLTNLLSPFLPFSSKKVRGFLNIDKPDWKYIEV----LPATKLEK-VEILFPRI 525


>gi|71894319|ref|YP_278427.1| methionyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851107|gb|AAZ43716.1| methionyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 518

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 156/506 (30%), Positives = 261/506 (51%), Gaps = 15/506 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  YI+T I Y +   HIGH Y   +A V+  + +L G +  F TG+DEHG KIA+ A+
Sbjct: 2   KKNFYITTPIYYASGNLHIGHLYTTTLAWVIRNYQKLLGNETKFLTGSDEHGSKIAQKAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              ++   FV+  +  F+++ +  DI+YD FIRTT + H  T + ++        IYK  
Sbjct: 62  ENNLSEIEFVNSVAAKFKELWNSYDINYDIFIRTTSENHKKTAQKIFSYFYKNNYIYKNN 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y+G YS+  E +    +  +     Y+   H+ +  + EE YFF++S +   L  Y+  +
Sbjct: 122 YTGLYSVSAEEFLTKSQALEKNGKYYHPVSHDELIEVSEESYFFKMSEFSPWLKKYFAEN 181

Query: 184 PEFILPIERRNEVISFV-KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             F+ P +  NE+++   K+GL+DLS++R    W I I +D  + +YVW+DAL+NY++  
Sbjct: 182 SNFLFPKKIENEILNNFIKNGLQDLSVTRTNVSWAIPIKEDLNHTLYVWVDALSNYISAL 241

Query: 243 GYLDNPDG-----SKAKFW--PAD--LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           GY    D          FW  P    +H+IGK+I RFH IYWP FL + NL  P  + +H
Sbjct: 242 GYNPELDYDSQSEDFKNFWENPNSKVVHLIGKEIARFHMIYWPIFLKALNLKQPTNIVAH 301

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+IL    K+SKS GNV+DP E++ +   + ++YFL  +I  G DG +D+  L   +NA+
Sbjct: 302 GWILANDGKMSKSKGNVVDPNELLLKFDKEQIKYFLASQIPMGNDGVFDEKLLVDSINAN 361

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           + N  GNL+SRS+ M    +   +       +    I     +   + +++M   L+ +A
Sbjct: 362 IINSYGNLISRSLKMYANSFSVPLKYSKNTEKDFLEIEEKILKSKVDFKKHMDLYLVDKA 421

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                 L S+++++ D + PW L K N      +L V    I  L+            ++
Sbjct: 422 FEVARELASDLNKFIDIKMPWTL-KDNLKELEKILIVLFNGIYALSCYYSIVFKNKTKEV 480

Query: 474 FDILFVA----DENRCFQSLDQRLKP 495
            ++L V     ++   F   ++ + P
Sbjct: 481 AEVLKVTHFDLEKIDDFSKFNETIFP 506


>gi|71900625|ref|ZP_00682751.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|71729619|gb|EAO31724.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
          Length = 702

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 129/538 (23%), Positives = 210/538 (39%), Gaps = 43/538 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+
Sbjct: 17  LVTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGM 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F+     +        ++++D +  T    +       +  +   G I     + +
Sbjct: 77  PPEAFIATTQASHERDFAAFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QWMEE 162
           Y      +  D  V             G + +   A ++P               +  + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF ++ +   L  +            +  E +   K GL+   +SR    +G +IPD
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLD-AKGGLRPWDISRDAPYFGFEIPD 255

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L            ++       H IGKDI+ FHA++WP
Sbjct: 256 QPGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR-EIA 334
           A L       P ++  +G++   G K+SKS G  I         +  DALRY+       
Sbjct: 316 AVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSG 375

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVNADL   + NL SR  S I   ++G +    A T  D       
Sbjct: 376 DIDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQL----ADTLPDHIQYDRF 431

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
              L  IR+  +      A+ Q + L  E ++Y D  KPW + K +    +   V    +
Sbjct: 432 VAALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQHHADAQLHAVCTQGL 491

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P  +  I    F+A     +Q ++Q L  G  + + + P+F R 
Sbjct: 492 NLFRVLITALKPILPHTS--IQAETFLAAPVTAWQDVNQPLTGGHTI-QPYSPLFTRI 546


>gi|229164009|ref|ZP_04291946.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228619392|gb|EEK76281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 544

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 130/537 (24%), Positives = 237/537 (44%), Gaps = 45/537 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F                 R N +     +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQKGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
                   +YVWI+A+T Y + +  + +       +FW  D    +V GKD + FH+I W
Sbjct: 242 VTGYEDKKVYVWIEAVTGYYSASKHWAEETGKDDREFWDRDAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P  + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEDAIPHHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTINAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGILPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDERQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQS-LDQRLKPGFMLHKTFDPIFPRF 510
           I   A LL+ F+P  + ++   L +  +    Q+ L  R+        +  P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRTTLSIVQQTWGPQNTLPSRID-------SVQPLFERI 527


>gi|194336292|ref|YP_002018086.1| methionyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|226710911|sp|B4SGQ6|SYM_PELPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194308769|gb|ACF43469.1| methionyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 700

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 139/563 (24%), Positives = 242/563 (42%), Gaps = 58/563 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    K  ++TA+ Y N   H+GH A   + AD+  R+ RL G D++   G+DEHG  I 
Sbjct: 1   MHPFTKTLVTTALPYANGPVHLGHLAGVYLPADLYVRYMRLKGEDIIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ K  VD+  R   +      IS+D + RTT + HH T +  +  I +KG  
Sbjct: 61  ITAEREGISPKDVVDRYHRMNSEAFSKCGISFDYYGRTTSEVHHKTAQEFFTDIEEKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +     ++  + + + +D  V             G   +      +P++ +  +     
Sbjct: 121 IRKSEKLFFDRKADRFLSDRYVTGTCPICNNTEANGDQCEQCGTHLSPLELINPKSKLSD 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     ++F L  +QD+L SY   H +        N   +++K GLKD +++R   
Sbjct: 181 ATPELRETMHWYFPLGRFQDQLESYVHQHEDDWRQ-NVLNYTHTWLKQGLKDRAITRD-L 238

Query: 215 DWGIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVI 263
            WGIK+P +       ++YVW DA+  Y++ T           + K +  +     LH I
Sbjct: 239 SWGIKVPLESEEAEGKVLYVWFDAVLGYISFTREWAEKLGQSERWKEYWQNPECRLLHFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH +  PA L++ N         L   V +  F+  +G K SKS    +   E 
Sbjct: 299 GKDNVVFHTLMLPAILMAWNEGRQSECYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+   D LRY +       KD  +     + R N +LA+ +GN + RSV      +DG 
Sbjct: 359 LEKFPADTLRYSIAMNYPENKDTDFSWQDFQNRTNGELADTLGNFIKRSVDFTNARFDGE 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P   +    +  +L      + +I           A++  + +    +R+    +PW+L
Sbjct: 419 VPWDYSEDLLNNVLLC---DQIDDIARAYDGFHFREAVSSSMDIARNANRFLTQNEPWKL 475

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-----QSLDQ 491
            KT+PD A+ V+ +++ +   L+IL    +P+  N+I  +L                 +Q
Sbjct: 476 IKTDPDAAARVMSISLNLCHALSILFYPVIPETCNRIHAMLGFDGTIDSLIKPGVSLWEQ 535

Query: 492 RLKP----GFMLHKTFDPIFPRF 510
             KP    G  L    + +F + 
Sbjct: 536 AKKPGLNKGHRLLGKSEILFTKI 558


>gi|325929563|ref|ZP_08190677.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540073|gb|EGD11701.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 694

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 207/541 (38%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G        A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A  ++D+   
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKLAD--ALPDADQ--Y 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVVRPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|302865243|ref|YP_003833880.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568102|gb|ADL44304.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 600

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 142/526 (26%), Positives = 230/526 (43%), Gaps = 62/526 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A   GVT 
Sbjct: 8   VAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADAEGVTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   D+ +R   +    L +SYD F RTT + H+   + L+  +   G I     +G   
Sbjct: 68  RELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFTGLHRNGYIVPKVTTGAIS 127

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         +  +G        Q +P+              +++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPIDLIDPKSKINGETPEFVETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A  D L  + ++   +   + R +  +      L+  +++R   +WG+ IP D 
Sbjct: 188 FFLDLPALADALRQWLDTRDGWRPNVLRFSRNLL---DDLQPRAITRD-LEWGVPIPLDD 243

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------LHVIGKDIL 268
               P   +YVW DA+  YL+ +       G      K+W AD         + +GKD +
Sbjct: 244 WRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWRKWWSADGEGKDARSYYFMGKDNI 303

Query: 269 RFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH++ WPA                    L LP +V S  ++  +G K S S   VI   
Sbjct: 304 VFHSVIWPALLGGYSGEGARDGEPGELGRLNLPTEVVSSEYLTMEGRKFSSSRKVVIYVR 363

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E    DALRYF+        D  +      +R N +L  G GNLV+RSVSM  K++ 
Sbjct: 364 DFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSVSMAAKNFG 423

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            + P  P   TE+D+++L+        + + +      +A+ + + +V+E ++Y   Q P
Sbjct: 424 AIPPVDPAGLTEADQALLATAKAGFGVVGDLIARHRQKQAIGEAMKVVAEANKYLSEQAP 483

Query: 434 WELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+LK  +   R  TVL+V ++V+     LL  F+P  A KI ++L 
Sbjct: 484 WKLKGEDEKPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHELLG 529


>gi|255711230|ref|XP_002551898.1| KLTH0B02486p [Lachancea thermotolerans]
 gi|238933276|emb|CAR21460.1| KLTH0B02486p [Lachancea thermotolerans]
          Length = 621

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 170/531 (32%), Positives = 264/531 (49%), Gaps = 55/531 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I+T I YPNA+PH+GH Y  ++ DV  R+  + G + LFTTGTDEHG KI  A++  G
Sbjct: 62  FHITTPIFYPNARPHLGHLYSSLLCDVTKRWRAMQGYNTLFTTGTDEHGLKIQNASEKNG 121

Query: 67  VT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  K FVD   R F  +  + +ISY  FIRTT+  H    R LW +  + G IYKG + 
Sbjct: 122 YSNPKQFVDVLYREFVKLDQMANISYTRFIRTTDYDHVRAVRELWNRCWESGYIYKGEHE 181

Query: 126 GWYSLRDEAYYNDDEVYK---------------GADGQYYNAQ-HNPVQWMEEEGYFFRL 169
           GWYS+ DE +Y + +V +                 DG++ N +  N V +  E  YFF+L
Sbjct: 182 GWYSISDECFYPESKVVQLQGDGQELPFGSPEIRKDGKFINTETRNGVVYHSETNYFFKL 241

Query: 170 SAYQDKLLSYYESHPEFIL--PIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQ 225
           S++Q++LL++ E      +  P  R   +     S L+DLS+SR      WGI +P DP 
Sbjct: 242 SSFQNRLLTFLEKENPHFISPPSRRDQIINELRGSKLRDLSISRPSSRIKWGIDVPQDPS 301

Query: 226 YIMYVWIDALTNYLT---------------TTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
             +YVW DAL NYLT                   + +       +W    H+IGKDI +F
Sbjct: 302 QKIYVWFDALCNYLTSVGGLQAVLDNSPAAVKHTITSQLKMPRNWWVNTTHIIGKDIAKF 361

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HAIYWP FL++A +PLPK++  HG  L  G K+SKS+GNV+DP+++I     D +R++L+
Sbjct: 362 HAIYWPCFLMAAGIPLPKQIIVHGHWLSGGVKMSKSVGNVVDPLDMILHYECDPVRWYLL 421

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS------MILKDYDGMIPTPG--- 381
                  DG + ++ L       + +  GNL++R  S        ++ +      P    
Sbjct: 422 ENSHIEADGDFREERLHA-TREQIVSKWGNLLNRCCSNKFNIPRAVETFASQAANPENNA 480

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    ES   ++ +   + +    +M+      AL  +  ++ + + +     PW 
Sbjct: 481 ATLIGTEAQESYRELIQLLQTLPELFSSHMRQLETRSALKLLWDVIGKANAFVQTSTPWL 540

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                 D    +++  +EV+R  +IL Q  +P L+N + D + V  ENR  
Sbjct: 541 KSGEEQDL---IIFTAIEVVRITSILAQPIMPTLSNALLDRIGVDTENRDL 588


>gi|222098488|ref|YP_002532546.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782851|sp|B9J4E0|SYM_BACCQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221242547|gb|ACM15257.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 544

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKDIADQYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEVI---------------SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+   E +                +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVENVKQTGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGEDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALESIFDAVRFANKYFDEKQPWKQREDNPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I     LL+ F+P  + +I + L +   NR ++S          L    D   P+F R 
Sbjct: 478 IANFVNLLEPFLPFSSERIRNTLSIV--NRNWES-------QHTLPSRIDSVQPLFERI 527


>gi|229032677|ref|ZP_04188640.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228728676|gb|EEL79689.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 544

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 236/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNE---------------VISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E                  +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVETAKQTGAWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEEAGKDDQEFWGKEAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G +P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGS----IDVELKGKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + I E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKNIGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKQREDDPVACEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +  +N          +P   L    D   P+F R 
Sbjct: 478 IVNFANLLEPFLPFSSERVRNTLSIVKQNW---------EPQNTLPNKIDSVQPLFERI 527


>gi|159905012|ref|YP_001548674.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886505|gb|ABX01442.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 663

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 139/534 (26%), Positives = 226/534 (42%), Gaps = 46/534 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD+  R+ RL G +V+   GTD HG  I   A+ 
Sbjct: 2   KHLVTTALAYTNGPLHLGHARSTYIPADIYTRYLRLKGEEVVHVGGTDNHGVPITLTAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV     VD+     +   D L++S+D F RT    H  T +  + K+ + G IY+   
Sbjct: 62  EGVKPIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIKTAQEFYSKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  + + Y  D  V                               Y    ++  +  
Sbjct: 122 EQFYCEKCDMYLADRYVEGICPFCEGEARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIK 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA QD L  Y E+ PE   P   +N  + +++  L D  +SR    WG+ I
Sbjct: 182 RTTHYFFKLSAMQDVLKEYIENSPEM--PEHVKNMALRWIEE-LHDWDVSR-NIKWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
           P     +MYVWI+A   Y++ T  L +   S       +    H IGKDI   HA++WP 
Sbjct: 238 PGCDDQVMYVWIEAPIGYVSFTKQLGDVWKSYWLENTDNSKISHFIGKDITVHHAVFWPG 297

Query: 278 F-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                    +P  V S G++  + +K+S S   V+   + IE    D LRYF +      
Sbjct: 298 ILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFIENFSSDYLRYFFMINAPLN 357

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCS 395
           +D  +  D  +KR+N +L + IGN   R++    + +            + D+ ++S C 
Sbjct: 358 RDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPVVDLNQLKDEDKKLISKCE 417

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
                +   ++      AL ++I L  + + YF    PW +K  + +R   V+Y     +
Sbjct: 418 DTSNRVDSLIREYNFKDALMEIILLAKDGNAYFQGMAPWAIK--DEERLKEVMYTCSVAL 475

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + +  LL +F+P+    + + +    E    +     L       K    IF +
Sbjct: 476 KYIIYLLSSFMPEKTALLLEYMN---EELDLEVRGNPL-------KKPKVIFTK 519


>gi|34496661|ref|NP_900876.1| methionyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|68565993|sp|Q7NYR7|SYM_CHRVO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|34102516|gb|AAQ58881.1| methionyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 689

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 145/553 (26%), Positives = 228/553 (41%), Gaps = 56/553 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y NA  H+GH  E I  D+  RF ++ G +  +    D HG  I  AA
Sbjct: 5   TKRKILVTSALPYANAGLHLGHMLEQIQTDIWVRFQKMRGHECYYVCADDTHGAPIMLAA 64

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  V++        +    I +D++  T    +      ++  +     I   
Sbjct: 65  EKRGITPEQLVNEVRELHVADSQGFLIGHDNYYSTNSPENKALAEQVYLALKADDKIACR 124

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE--------- 162
                +    + +  D  V             G + +   A + P +             
Sbjct: 125 TIEQLFDPEKQMFLPDRFVKGECPKCSAKDQYGDNCEVCGATYAPTELKNPYSAVSGAKP 184

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEF-------ILPIERRNEVISFVKSGLKDLSLS 210
                E +FFRL    D L ++               L  E  N++  ++  GL+D  +S
Sbjct: 185 VLKTSEHFFFRLGECADFLKAWTSGASRRADGAVQPHLQPESLNKMNEWIGGGLQDWDIS 244

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIG 264
           R    +G +IP  P    YVW+DA   Y+ +   L          W A        H IG
Sbjct: 245 RDAPYFGFEIPGAPGKYFYVWLDAPIGYMASFKNLCERLNLNFDEWFAKDSQTEMYHFIG 304

Query: 265 KDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVD 323
           KDIL FHA++WPA L  + L  P  VF+HGF+   G+K+SKS G  I     +   +  +
Sbjct: 305 KDILYFHALFWPAMLNYSGLRAPTGVFAHGFLTVDGQKMSKSRGTFIQAKSYLDCGLNPE 364

Query: 324 ALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
            +RY++  +     +D   + +    RVN+DL     N+ SRS   I K +DGM+    A
Sbjct: 365 WMRYYIAAKLNGRIEDIDLNLNDFVARVNSDLVGKFVNIASRSAGFIAKRFDGML----A 420

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-- 440
              SD  IL+      +E+    + +   +AL  V++L   V+ Y DA KPWEL K    
Sbjct: 421 AQVSDGEILAKLQAAAEELAAAYEAREYAKALRDVMALADIVNGYVDANKPWELAKQEGQ 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             R   V  V V   R LAI L+  +PKLA  +   L VA     +   +  L     L 
Sbjct: 481 DARLQDVCTVLVNAFRLLAIYLKPVLPKLAEGVEAFLDVAP--LSWHDAETLL-----LG 533

Query: 501 KTFDP---IFPRF 510
           K  +    +  R 
Sbjct: 534 KKINAYQHLMQRI 546


>gi|145219579|ref|YP_001130288.1| methionyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|187647742|sp|A4SE77|SYM_PROVI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145205743|gb|ABP36786.1| methionyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 702

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 129/563 (22%), Positives = 244/563 (43%), Gaps = 56/563 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G DV+   G+DEHG  I 
Sbjct: 1   MPQFQRTLVTTALPYANGPVHLGHLAGVYLPADLFVRYKRLQGEDVIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  VD+      +      IS+D + RT+ + HH T +  + +I  KG  
Sbjct: 61  ITAEKEGITPRDVVDRYHSMNLEAFKRCGISFDYYGRTSSELHHKTAQEFFLEIEGKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +     +Y      + +D  V             G   +      +P++ +  +     
Sbjct: 121 ERKTEKLFYDASACRFLSDRYVTGTCPICGNTEANGDQCEQCGTHLSPLELINPKSKLSD 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     ++F L  +Q +L ++  SH +        N   +++  GL D +++R   
Sbjct: 181 ATPELRETLHWYFPLGRFQKQLEAFVGSHDDDWR-ANVLNYTRTWLNQGLNDRAITRD-L 238

Query: 215 DWGIKIP-DDPQ---YIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVI 263
            WGIK+P  DP+    ++YVW DA+  Y++             + K +  +     ++ I
Sbjct: 239 SWGIKVPLQDPEAEGKVLYVWFDAVLGYVSFAREWAVLQGSPDRWKEYWQNPDSRVVNFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH +  PA L++ N         L   V +  F+  +G K SKS    +   E 
Sbjct: 299 GKDNVVFHTLMLPAILMAWNEGRSDSIYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++   + LRY +       KD  +     + R N +LA+ +GN + RSV      ++G+
Sbjct: 359 LDKFPAETLRYSIAMNYPENKDSDFSWTDFQNRTNGELADTLGNFIKRSVDFTNSRFEGI 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P   +  E D S+    +  + ++ E  +      A++  + +    +R+    +PW+ 
Sbjct: 419 VPHACSRQEWD-SLGINWADTIHQLDEAFEGFHFREAVSAAMDIARAANRFLTGAEPWKA 477

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC--------FQS 488
            K + D A+  + +++ +   L+I L   +P+ AN+I  +L                ++S
Sbjct: 478 IKEDRDGAARTMALSLNLCHALSIALYPVLPETANRIHSMLGFQGTIESLFKRGVPLYKS 537

Query: 489 LDQRLKP-GFMLHKTFDPIFPRF 510
           L +   P G  L    + +F + 
Sbjct: 538 LTEPALPMGHSLSGESEILFAKI 560


>gi|206970493|ref|ZP_03231446.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206735070|gb|EDZ52239.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 544

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 232/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F L  +Q K+    E   E              +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQKIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 GGLYKRVGEAIEQTKFKVALETIFDTVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFAHLLEPFLPFSSERVRNTLSIV--NRNWE-------PQNTLPSRIDSVQPLFERI 527


>gi|332022780|gb|EGI63053.1| Methionyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 977

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 120/549 (21%), Positives = 230/549 (41%), Gaps = 43/549 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+  GTDE+G     
Sbjct: 260 KGERNMLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYICGTDEYGTATEA 319

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +   D+      D+     I +D F RT+     +  +  + KI  +G + 
Sbjct: 320 KALQEKMTPQAICDKFFDIHNDIYRWFGIGFDYFGRTSTPEQTEIVQAFFLKIKSQGYVL 379

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-----------YYNAQHNPVQWMEEEG----- 164
                  +    + +  D  V     G                  N V+ +         
Sbjct: 380 TETVEQLHCEFCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLVNAVELINPRCKICNI 439

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                    FF      ++ L  Y +  +       R    ++++ GL+   ++R    W
Sbjct: 440 KPVVKNSVQFFLDLPKLEEKLKEYSTTRDKGWSNVARVVSKAWLRDGLQPRCITRD-LKW 498

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-----HVIGKDILR 269
           GI +P +     + YVW DA   Y++ T           +    D+       + KD + 
Sbjct: 499 GIPVPVEGFEHKVFYVWFDAPFGYISITKRYTKEYKQWWQPPSQDIKIDLYQFMAKDNIP 558

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH I +PA LL+A  N  L K + +  ++ ++ +K SKS G  +   +  +  +  D  R
Sbjct: 559 FHTIMFPACLLAANQNYTLMKCILATEYLNYEDKKFSKSRGIGVFGTDARDTGIPADVWR 618

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L       +D  ++   L  + N++L N +GN V+R++    K +D  IP P    E+
Sbjct: 619 FYLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRALVFCEKFFDSNIP-PIEPEEA 677

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D ++L++  R L      M+   +   L +++++    ++Y   Q+PW   K N D   +
Sbjct: 678 DWTVLALVQRELSAYINAMEQGKLKDGLKRILAISKHGNQYMQFQQPWVKIKGNDDNKKK 737

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHK 501
           A TV+ +   +   L+ LL  F+P +A ++   L ++++N  +  +++   L     + K
Sbjct: 738 AGTVVAICCNLACLLSALLAPFMPNIAKQLRSQLGLSNKNYGYIPETITNMLPTWHKIGK 797

Query: 502 TFDPIFPRF 510
              P+F + 
Sbjct: 798 P-SPLFTKI 805


>gi|229049724|ref|ZP_04194281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|229112480|ref|ZP_04242017.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228670860|gb|EEL26167.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228722637|gb|EEL74025.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 544

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|298676112|ref|YP_003727862.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298289100|gb|ADI75066.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 679

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 125/539 (23%), Positives = 225/539 (41%), Gaps = 43/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N + HIGH    I AD+  R  +  G DV F  G+D HG  I   A+ 
Sbjct: 8   KPVLVTCGLPYANGKAHIGHLRTYIPADIYVRALKKHGQDVTFVCGSDTHGTPIVFNAEE 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              T +  +    ++F D+   +++ +D F  T +  +H+    +  K+ D G +Y    
Sbjct: 68  YNTTPEELIKTYHKHFDDIFKSMNVYFDAFGTTEDATNHNRTHAIVNKLIDNGYVYSKTI 127

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y    + Y  D  V                                      +  ++
Sbjct: 128 EIAYCPVCDRYLPDRYVKGKCPHCAEAARGDECDQGCGKHLEPGELESPVCTLCGDAAEY 187

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E+E YFF+LS +QD L +Y             RN  + +VK GL D  ++R   +WG+K
Sbjct: 188 KEQEHYFFKLSQFQDFLQNYL---ENLEGTSNARNYAMGWVKKGLDDWCITR-NLEWGVK 243

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T  + +  + S  K W  D   +H IG DI+  H I+W
Sbjct: 244 FPGRDDLVVYVWVDAPIGYISFTEEWANANNESWEKIWKDDSRIVHFIGGDIIYHHCIFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A    P  V + G +  + +  SKS G V+   E  +      D LRY+L    
Sbjct: 304 PAMLKGAEYTQPWSVVASGMLKIENKTFSKSRGYVVWVEEDYLNHGFHPDLLRYYLATYT 363

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  K+  +     ++++N++L    GN   RS+    K++  +        E +  +L  
Sbjct: 364 SHTKELNFSWPFFQEKINSELVGVFGNFFYRSLLFAYKNFGYIP-----EGEIESDVLDN 418

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               +    E M+N    +A+   +SL S  + YF + +PW L K +      V+   ++
Sbjct: 419 IQSTIDGYTEAMENYEFKKAIDTALSLASYGNTYFQSNEPWRLIKEDKTECGRVIANCIQ 478

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + L +L +  VP+     +  + ++ +     +    + ++    + K    +F + 
Sbjct: 479 IAKALVVLFEPVVPEKMEDAWKQIGMSSDVHASRYSDATELVESNTPIPKPR-ILFKKI 536


>gi|228910874|ref|ZP_04074683.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228848825|gb|EEM93670.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 544

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G DVL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEDVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRDVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + +  + +       +FW +D    +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTINAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K YDG++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPKGTINVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +       +Y  + +
Sbjct: 418 EGLYKNVGEAIEQTKFKVALETIFDAVRFANKYFDERQPWKEREDDSVSCEETIYNCIYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPNRIDSVQPLFERI 527


>gi|54295707|ref|YP_128122.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|68565967|sp|Q5WST1|SYM_LEGPL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53755539|emb|CAH17038.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 670

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 230/543 (42%), Gaps = 45/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    
Sbjct: 181 SPVEKESEHYFFDLPRYEELLKDWTRKG---HLQTEVTNKLSEWFEAGLKQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ 
Sbjct: 238 FGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKTSKTELYHFVGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+ 
Sbjct: 298 FHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYF 357

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + D    RVNADL   + N+ SR    I K +D  + +     +   
Sbjct: 358 AAKLNGRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKLHN 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
            +LS      + + +   ++   RA+ Q++    +V++Y DA KPW L K          
Sbjct: 418 DLLS----ARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +A    + L    E   + S+D+ L        TF P+
Sbjct: 474 ICTMGINLFRILITYLKPVLPMMAKASEEFLN--SEPLHWGSIDKPLL--NHRINTFKPL 529

Query: 507 FPR 509
             R
Sbjct: 530 MVR 532


>gi|75760133|ref|ZP_00740193.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228903536|ref|ZP_04067659.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|74492370|gb|EAO55526.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228856112|gb|EEN00649.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 544

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 237/538 (44%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E+       +   ++ 
Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTF-DWGIKI 220
             +Y +   F                 R N +     +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQQQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
                  +YVWI+A+  Y + + Y  +       +FW +D    +V GKD + FH+I WP
Sbjct: 243 KGYEDKKIYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG++P      E    +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVE----LKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  + +I
Sbjct: 419 GLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIYNCIYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++   L +   NR ++       P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRSTLSIV--NRNWE-------PQNTLPNRIDSVQPLFERI 527


>gi|58581547|ref|YP_200563.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623480|ref|YP_450852.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188577209|ref|YP_001914138.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|68565959|sp|Q5H1J3|SYM_XANOR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123766596|sp|Q2P4E9|SYM_XANOM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710939|sp|B2SRQ4|SYM_XANOP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|58426141|gb|AAW75178.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367420|dbj|BAE68578.1| Methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521661|gb|ACD59606.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 694

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 123/541 (22%), Positives = 205/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIASIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPRSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGQFDGFLHEWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           +P  P    YVW+DA   YL +   L    G        D       H IGKDI+ FH +
Sbjct: 242 MPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFAAHLVDGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDSADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRVLVAALKPILPRTCAEAEAFLSAP--MTSWEDVIRPLTS-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|134105975|ref|XP_777998.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260701|gb|EAL23351.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 582

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 172/500 (34%), Positives = 257/500 (51%), Gaps = 19/500 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAA 62
           +  Y++T I Y NA PH+GH + +++ DVLARF RL      V+F TGTDEHG KI +AA
Sbjct: 51  KPFYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTDEHGLKIQQAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GV  + F D  S+ FR +A + + S  DFIRTTE RH       W  +   GDIYKG
Sbjct: 111 KANGVGEQEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKG 170

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            +SGWYS+ DE++Y   +V K  +          N V W EE  + FRL  ++  L  + 
Sbjct: 171 THSGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEETNWKFRLGRHKKVLEKWL 230

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                      R + +          +S       W I +P DP+  +YVW+DAL NY+T
Sbjct: 231 SQPESVHPNTVRLDLLRQLSSLEDLSVSRPSSRVKWAIPVPGDPEQSIYVWVDALINYIT 290

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
             GY D     ++  WPAD+HV+GKDI++FHA++WP+ L SA+LP PK++ +H       
Sbjct: 291 VLGYPDWEGKGESVGWPADVHVVGKDIIKFHALHWPSLLHSASLPAPKRIIAHAHWTMSH 350

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANGIG 359
            K+SKS GNV+DPI  + + G D +R++L+R       D  Y+     +     LA+ +G
Sbjct: 351 TKMSKSRGNVVDPISAMTQWGEDGVRWYLMRVGGGLVDDADYNPAE-VEVHYRLLADQVG 409

Query: 360 NLVSR-----SVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           NL SR      +    +++D     T     + DE +  + +R+ +E    M+   + +A
Sbjct: 410 NLFSRISGAKVLKKAEREFDWGNEKTRDRGEDRDEELDGMMARMREEFEGKMEVFGVSQA 469

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT--VEVIRQLAILLQAFVPKLAN 471
            A V+ +V   ++ F +  PW      P   S+V  +T     +R  AILLQ  +P  A 
Sbjct: 470 CAGVMDVVMATNKLFTSLAPWS-----PSTPSSVPALTYAYHALRLSAILLQPIIPAKAG 524

Query: 472 KIFDILFVADENRCFQSLDQ 491
           +  D L V  E R +   + 
Sbjct: 525 EALDRLGVPAEERSWVDAEW 544


>gi|289192151|ref|YP_003458092.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938601|gb|ADC69356.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 650

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 131/527 (24%), Positives = 240/527 (45%), Gaps = 38/527 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I+TA+AY N   H+GHA    I AD++ ++ +L G DV+   GTD HG  I   A+ 
Sbjct: 2   RYLITTALAYTNGPLHLGHARSTYIPADIMYKYLKLKGEDVIHVGGTDNHGVPITLTAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  V++     ++  D+L I +D F +T  + H +T +  + K+ + G IY+   
Sbjct: 62  EGKSPEEIVEKYHNEIKEDLDLLGIEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  + + +  D  V                               Y        +  
Sbjct: 122 EQFYCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKNPYCVICKGKPEIR 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + YFF+LSA + +L  Y ++  E   P   +N  ++++K  L D  +SR    WG+ I
Sbjct: 182 KTKHYFFKLSALKKELEEYIKNAEEM--PEHVKNMALNWIKE-LHDWDISRD-ISWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFL 279
           P     +MYVW++A   Y++ T  L +            + H IGKDI   HA++WP  L
Sbjct: 238 PGT-NQVMYVWLEAPIGYISFTKMLGDVWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 L-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +   +  LP  V S G++  +G K+S S   V+   + ++    D LRY+L+      KD
Sbjct: 297 IAHGSFNLPTAVVSGGYLTLEGRKMSTSKKWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  +         + D+++L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDENRLKDEDKALLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ + +N+++     AL  ++ L  E + YF   +PW +   +  R   +LY   + ++ 
Sbjct: 417 IEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--NDEKRLEEILYTCCKAVKT 474

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           +  LL  ++PK +    ++L + +E    +     LK   ++ K  +
Sbjct: 475 IIYLLYPYMPKKS---LELLNLMNEELDLELRGNELKKPKIIFKKVE 518


>gi|228988288|ref|ZP_04148383.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771460|gb|EEM19931.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 544

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 128/539 (23%), Positives = 233/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F L  +Q+++ +  E+  +              +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKTAVENAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + +  + +       +FW  +    +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKEAKIYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKQREDDPVLCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQHTLPSRIDSVQPLFERI 527


>gi|296505474|ref|YP_003667174.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296326526|gb|ADH09454.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 544

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  LTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|146418705|ref|XP_001485318.1| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 565

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 175/523 (33%), Positives = 275/523 (52%), Gaps = 43/523 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI++ I Y NA+PH+GH Y M + D  +R+ +L   +  F TGTDEHG KI   A+ 
Sbjct: 14  KPYYITSPIFYVNAKPHLGHLYSMHLCDTRSRWEKLKNKESFFVTGTDEHGLKIQAVAEK 73

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K  VD+ S NF+ +A+  DI YD FIRTT+  H ++ +  WK ++++G IYKG +
Sbjct: 74  RGISPKTLVDEVSLNFKHLAEKFDIQYDRFIRTTDGDHIESVKHFWKTMNERGLIYKGTH 133

Query: 125 SGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           SGWY++ DE +Y + ++       G          N V + EE  YFFRLS ++D+L++Y
Sbjct: 134 SGWYAVSDETFYPESQIEKVTDSNGISKMISKETKNEVIFHEESNYFFRLSKFRDRLINY 193

Query: 180 YESHPEFILPIERRNEVISFVK-SGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
            + +P+ I P  + + +++ ++   L+DLS+SR      WGI++P D    +YVW DAL 
Sbjct: 194 LKENPQLITPKNKYDSILAELEGEKLEDLSISRPSSRLLWGIEVPGDDTQRIYVWFDALI 253

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY      +    WPA +HVIGKDI RFH IYWP FL++A+LPLPK++  H   
Sbjct: 254 NYITAAGY-PKSLNAPTSPWPA-VHVIGKDIARFHCIYWPIFLMAADLPLPKQIVIHSHW 311

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKSLGNV+DP++ ++  G DA R+FL        D  Y +         +L  
Sbjct: 312 LCDGFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSNIESDSNYSEREF-HFTRENLIG 370

Query: 357 GIGNLVSRS----------VSMILKD---------YDGMIPTPGAFTESDESILSVCSRV 397
              NLV+R           V+M+ +           D     P A  ++   + +    +
Sbjct: 371 KYANLVTRCGGPSFDIEESVAMLKEGSFDKIESFWEDCPYENPAAVKDAAGKLRACLDNL 430

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT------NPDRAST----- 446
              +  +++N    +A       +   ++ F   +PW   K        P++  T     
Sbjct: 431 YPAMDTHLENFDHMKATQVWWEAIEAGNQLFQLGQPWIFTKEMKNENLQPEKRETSKLVQ 490

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             ++Y+  E  R  +IL+   +P L++KI D L V+ + R  Q
Sbjct: 491 SFLVYMAAETCRIGSILMGPIMPHLSHKILDRLGVSMQKRTAQ 533


>gi|219683370|ref|YP_002469753.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782852|sp|B8DT48|SYM_BIFA0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219621020|gb|ACL29177.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 623

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 135/538 (25%), Positives = 237/538 (44%), Gaps = 58/538 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   IMVNVAWPYANGPRHIGHVAGFGVPSDVYARYQRMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   ++ +R   +    L +SYD F RTT K H    + ++++    G IYKG   
Sbjct: 64  GVTPQELANRYNRVIANDLCNLGLSYDLFTRTTTKNHEHVVQEMFRQCLANGYIYKGTQK 123

Query: 126 G-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WM 160
                          +  E      +  +G        + +P +              + 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAQGARGDQCDNCGNELDPDELINPVSKINGETPIFE 183

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E YF  L A  +  L++ ++   +   +   +  +      +K  +++R   DWGI +
Sbjct: 184 ETEHYFLDLPALAEANLAWLKTRKGWRPNVLNFSIGLF---KEVKPRAITRD-IDWGIPV 239

Query: 221 P-----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDIL 268
           P     D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD +
Sbjct: 240 PVPGWIDNPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRAWWNDPATPGYYFMGKDNI 299

Query: 269 RFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WP+ +L+                L LP++V +  F+  +G+K S S G VI   
Sbjct: 300 TFHSQIWPSEMLAYNGEGSKGGEPGELGRLDLPEQVVASEFMTMEGKKFSSSRGIVIYVK 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++    VDA+RY++        D  +      ++ N  LA   GNLV+R  ++I K++ 
Sbjct: 360 DILSRYPVDAVRYYISAAGPESSDSDFTWAEFVRQNNEVLAASWGNLVNRVANLIAKNFG 419

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            + P      T+ D ++L+  S     +   ++      AL   +SLV ++++Y  A +P
Sbjct: 420 QIPPIVEEKMTDEDRALLAQSSAAFDTVGALIEQHRQKSALNDAMSLVGDINKYISATEP 479

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           W++ K +P+R  TVL+V  + +     LL  F+P  + K+++ L           +++
Sbjct: 480 WKI-KDDPERLGTVLHVAAQAVSDANHLLAPFLPHSSQKVWEALGGEGTFSPLPHIEE 536


>gi|294665009|ref|ZP_06730318.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605228|gb|EFF48570.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 694

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 203/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANVQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYAKLDAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDTAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPRSVISGAKPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLRQWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G        A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDAHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q + L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMELADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ +   L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVIGPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|325981754|ref|YP_004294156.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531273|gb|ADZ25994.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 701

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/546 (23%), Positives = 218/546 (39%), Gaps = 51/546 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ I++A+ Y N   H+GH  E I  D+  RF ++ G +V +    D HG  I   A
Sbjct: 2   SKRKILITSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHEVYYVCADDTHGTPIMLRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  + +             I +D++  T           ++ K+   G I   
Sbjct: 62  EKEGITPEALIARVHSEHLGDFSGFHIQFDNYYSTHSTETRHFSEDIYAKLKAAGLIAVR 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE--------- 162
                Y      +  D  V             G   +   A + P +             
Sbjct: 122 GIEQLYDPVKNMFLPDRFVKGECPKCGAKDQYGDSCEVCGAAYVPTELKNPYSAVSGAKP 181

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSRKT 213
                E YFF LS  +      + +     L +E  N++  +V    ++ L D  +SR  
Sbjct: 182 INKSSEHYFFSLSDPRCVDFLRHWACEGDHLQLEAANKMREWVGEAGENKLSDWDISRDA 241

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDI 267
             +G +IPD P    YVW+DA   Y+ +     +       +FW         H IGKDI
Sbjct: 242 PYFGFEIPDAPGKYFYVWLDAPVGYMGSFKNLCEREKIQFDEFWQPQSNAELYHFIGKDI 301

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           L FHA++WPA L +A    P K+F+HGF+   GEK+SKS G  I     + + +  + LR
Sbjct: 302 LYFHALFWPAMLQNAGYRTPTKIFAHGFLTVNGEKMSKSRGTFITAESYLRQGLNPEWLR 361

Query: 327 YFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +  +  +D   + +    RVN+DL     N+ SR    I K ++G +     +  
Sbjct: 362 YYYAAKLNSTLEDIDLNLEDFVARVNSDLVGKFINIASRCAGFISKRFEGRLVDGAQYQI 421

Query: 386 SDESILSVCSRVLQEIREN-MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR- 443
             + +    +    E+ E+  + +    A+ Q++    E +       PWE+ K NPDR 
Sbjct: 422 LQQMVNERFAAWRPEVIEHAFEAREYSAAIRQIMKFADEANEMIHQLAPWEIAK-NPDRS 480

Query: 444 --ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-------DQRLK 494
                   + V++   L+  L+  +P  A +I   L  A     +  L       D  L 
Sbjct: 481 DDLQRTCSLGVQLFYLLSRYLKPVLPATAQQIETFLNCAP--LTWPQLRDDQPVSDLLLP 538

Query: 495 PGFMLH 500
            G  ++
Sbjct: 539 AGHKIN 544


>gi|229135869|ref|ZP_04264636.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228647578|gb|EEL03646.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 544

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 126/538 (23%), Positives = 226/538 (42%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKI 220
           E ++F L  +Q ++    E   +              ++K GL+D ++SR       I +
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQKGTWRDNAIQLTERYLKEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
                  ++VWI+A+T Y + +  + +       +FW  D    +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIHVWIEAVTGYYSASKHWAEETGKDDQEFWDRDAKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G +P        D  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGS----IDVELKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L          S+    +P   L    D   P+F R 
Sbjct: 479 ANFAQLLEPFLPFSSERVRNTL---------SSVKVNWEPQNTLPNRIDNVQPLFERI 527


>gi|183602866|ref|ZP_02964227.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241191552|ref|YP_002968946.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196957|ref|YP_002970512.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183217919|gb|EDT88569.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249944|gb|ACS46884.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251511|gb|ACS48450.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295794544|gb|ADG34079.1| methionyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 619

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 135/536 (25%), Positives = 236/536 (44%), Gaps = 58/536 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GV
Sbjct: 2   VNVAWPYANGPRHIGHVAGFGVPSDVYARYQRMKGNDVLMVSGTDEHGTPILVEADKEGV 61

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG- 126
           T +   ++ +R   +    L +SYD F RTT K H    + ++++    G IYKG     
Sbjct: 62  TPQELANRYNRVIANDLCNLGLSYDLFTRTTTKNHEHVVQEMFRQCLANGYIYKGTQKVA 121

Query: 127 ----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEE 162
                        +  E      +  +G        + +P +              + E 
Sbjct: 122 ISPSTGRTLPDRYIEGECPICHAQGARGDQCDNCGNELDPDELINPVSKINGETPIFEET 181

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP- 221
           E YF  L A  +  L++ ++   +   +   +  +      +K  +++R   DWGI +P 
Sbjct: 182 EHYFLDLPALAEANLAWLKTRKGWRPNVLNFSIGLF---KEVKPRAITRD-IDWGIPVPV 237

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
               D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + F
Sbjct: 238 PGWIDNPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRAWWNDPATPGYYFMGKDNITF 297

Query: 271 HAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WP+ +L+                L LP++V +  F+  +G+K S S G VI   ++
Sbjct: 298 HSQIWPSEMLAYNGEGSKGGEPGELGRLDLPEQVVASEFMTMEGKKFSSSRGIVIYVKDI 357

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +    VDA+RY++        D  +      ++ N  LA   GNLV+R  ++I K++  +
Sbjct: 358 LSRYPVDAVRYYISAAGPESSDSDFTWAEFVRQNNEVLAASWGNLVNRVANLIAKNFGQI 417

Query: 377 IP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            P      T+ D ++L+  S     +   ++      AL   +SLV ++++Y  A +PW+
Sbjct: 418 PPIVEEKMTDEDRALLAQSSAAFDTVGALIEQHRQKSALNDAMSLVGDINKYISATEPWK 477

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           + K +P+R  TVL+V  + +     LL  F+P  + K+++ L           +++
Sbjct: 478 I-KDDPERLGTVLHVAAQAVSDANHLLAPFLPHSSQKVWEALGGEGTFSPLPHIEE 532


>gi|311108811|ref|YP_003981664.1| methionyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310763500|gb|ADP18949.1| methionyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 688

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 132/554 (23%), Positives = 228/554 (41%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   I +D +  T    +    + +++ +  +  I     
Sbjct: 63  EGITPQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSQDIYRALKAQDLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P + +             
Sbjct: 123 EQFYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTELINPYSALTGATPVL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYE----------SHPEFILPIERRNEVISFVKSGLKDLSL 209
              + +FF+LS  +                       +L   R        ++ L D  +
Sbjct: 183 KSSDHFFFKLSDPRCVEFLQQWTTGSNAAGGKHLQPEMLAKTREWLGSDDGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVI 263
           SR    +GI+IPD P    YVW+DA   YL +        G        PA     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDKLLDPAGPTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P  V  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYLELGMNA 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  +  A  +D  ++ +    RVN+DL     N+ SR+ S I K +DG++   G
Sbjct: 363 EWMRYYIAAKLNARVEDMDFNPEDFIARVNSDLIGKYVNIASRAASFITKHFDGVLGYSG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
             +    ++ +  +   + IR   + +  +RA+ ++++    +++ FD  +PW L K   
Sbjct: 423 DTS----ALAAEYAEQAESIRAAFEAREYNRAIREIMAYADRLNQAFDTAQPWVLAKGIA 478

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQ 491
                       +   ++   + L+++L   +P+LA ++   LF A     +     L Q
Sbjct: 479 TADDAQKAALQDICSRSLAGFKALSVMLAPVLPELAERVALELFGAQAPFTWADAAVLPQ 538

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  +P
Sbjct: 539 RVAPFKHLMQRVEP 552


>gi|320159818|ref|YP_004173042.1| methionyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319993671|dbj|BAJ62442.1| methionyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 598

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 137/579 (23%), Positives = 229/579 (39%), Gaps = 76/579 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + I+ A  Y NA+ H+G+     + AD++AR+HRL G  VL  +GTD HG  +   A  
Sbjct: 4   PVLIAVAWPYANAEIHVGNITGAYLPADIVARYHRLKGNRVLMVSGTDSHGTPVTLRADA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   +    +  ++F D+     ++YD F  T  + H    + ++  +   G +Y    
Sbjct: 64  EGKPVEEVYKRFHQSFLDLFQKAGLTYDLFTTTHTENHFKVAQSVFLALLKNGYLYTEVR 123

Query: 125 SGWY-----------SLRDEAYYNDDEVYKGADGQYYNAQHNP--------------VQW 159
             WY            +    Y   DE  +            P               + 
Sbjct: 124 PQWYSPSLRRFLPDRYIEGTCYICGDEHARSDQCDKCGNVLEPEKLINPRSKVDGSTPEL 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E   Y+  LS  + ++  +      +         +      GLK   ++R   DWGI 
Sbjct: 184 RETVHYYLDLSKLEPEVARFLRERQHYWRETVCNQTLGQIESEGLKSRPITRD-LDWGIP 242

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
           +P +      +YVW +A+  YL+         G     K W  +     ++ IGKD + F
Sbjct: 243 VPVEGWEGKCLYVWFEAVIGYLSAPIEWARLHGLGDAWKDWWVNPESRTIYFIGKDNIFF 302

Query: 271 HAIYWPAFLLSANLPL--------------PKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           HA +WPA LL                    P  V ++ F+  +G+KIS S    +   + 
Sbjct: 303 HAAWWPAQLLGMGETFMEIFAGEKGQKLVLPYDVPANQFMNLEGDKISGSRNWAVWGHDF 362

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +     D LRY+L   +   +D  +D +   KR N +L    GNL +R +S  +K ++G 
Sbjct: 363 LSRYDPDPLRYYLTVNMPEMRDTDWDWEDFYKRNNDELVATWGNLANRVLSFAVKHFEGK 422

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P PGA TE DE IL       + +   ++   +  AL   ++L +EV+RY D   PW+ 
Sbjct: 423 VPEPGALTELDEEILRKVESGFESVGAELEAVHLRSALGSAMALATEVNRYLDQTAPWKE 482

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI-------------------- 476
            KT+   A+  +Y  +  I  L++LL  F+P  + K+                       
Sbjct: 483 IKTDRQAAARAIYTALRCIDNLSVLLSPFLPFSSEKLHQYFGYEKPLFGKQATRTVQDGL 542

Query: 477 -----LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                L    ++   +     L+PG  L     P+F + 
Sbjct: 543 GEHTVLLYDPDDAAGKWQPSALQPGQPLQAP-QPLFKKL 580


>gi|325921029|ref|ZP_08182910.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548478|gb|EGD19451.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 696

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 206/541 (38%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYSKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLAGDVALPGVKAKLKEWLD-TEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G        A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G+++  G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVN+DL     NL SR    I K +DG +    A T  D +  
Sbjct: 362 SSGGVDDLDLNLGDFVTRVNSDLVGKFVNLASRCAGFIGKRFDGKL----ADTLPDLAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K      +  +V  
Sbjct: 418 ERFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQEGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVARPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|146329154|ref|YP_001209826.1| methionyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|187647717|sp|A5EY62|SYM_DICNV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146232624|gb|ABQ13602.1| methionyl-trna synthetase [Dichelobacter nodosus VCS1703A]
          Length = 673

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 132/541 (24%), Positives = 229/541 (42%), Gaps = 46/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++++S+A+ Y N   H+GH  E I  D+  RF +L G +  +    D HG  I   A+ 
Sbjct: 4   RRIFVSSALPYANGSIHLGHMVEHIQTDIWVRFQQLRGHECYYVCADDAHGTAIMLHAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +V +D+             I++  +  T    +      +++ +  KG I K   
Sbjct: 64  KGVTPEVLLDEVRAEHISDFQGFLINHHHYHTTHSDENRQLTNEIYQTLKSKGYILKKEI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
           S  +      +  D  +             G + +   + + P                 
Sbjct: 124 SQLFDPEKNIFLPDRFIKGICPKCQAKDQYGDNCEVCGSTYAPTDLIQPYSVLSGATPIM 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  + D L  + +      L    R+++  + ++GL+   +SR    WG  
Sbjct: 184 KKSEHFFFDLPQFTDFLKDWLQRAD---LQPAMRHKLAEWFEAGLQPWDISRDAPYWGFT 240

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP+      YVW+DA   Y          +   S   FW  D      H IGKDI  FH 
Sbjct: 241 IPEAKDKYFYVWLDAPVGYLGSFQAFCQQHQHVSFDDFWRDDNKTERYHFIGKDIAYFHM 300

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A L  P  VF HGF+   GEK+SKS G  I     ++ +  + LRY++  +
Sbjct: 301 LFWPAMLEGAGLQKPTGVFCHGFLTVNGEKMSKSRGTFIKARTYLKHLRPEYLRYYIASK 360

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   +D   + +  +++VN+DL   + NL SRS   + +  D    +      SD ++L
Sbjct: 361 LSAKVEDIDLNLNDFRQKVNSDLVGKLINLASRSAPFLQRFADNTTVSAF----SDSALL 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
                  + I  + + +   +A+ +V++L   V+ Y D  KPW L K     A  + +  
Sbjct: 417 EQLRGKSETIARDYEQREFGQAVREVMALADAVNAYVDETKPWILAKETGKAAEIAQIAS 476

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V +E  R L I L+  +PK+A      L ++ +   +Q +++ +         F P+  R
Sbjct: 477 VVLEAFRLLIIYLKPVLPKVAADAEAFLKLSPQ--SWQDIEKPMI--NHEIAAFSPMMQR 532

Query: 510 F 510
            
Sbjct: 533 I 533


>gi|190346781|gb|EDK38949.2| hypothetical protein PGUG_03047 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 565

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 175/523 (33%), Positives = 274/523 (52%), Gaps = 43/523 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  YI++ I Y NA+PH+GH Y M + D  +R+ +L   +  F TGTDEHG KI   A+ 
Sbjct: 14  KPYYITSPIFYVNAKPHLGHLYSMHLCDTRSRWEKLKNKESFFVTGTDEHGLKIQAVAEK 73

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ K  VD+ S NF+ +A+  DI YD FIRTT+  H ++ +  WK ++++G IYKG +
Sbjct: 74  RGISPKTLVDEVSLNFKHLAEKFDIQYDRFIRTTDGDHIESVKHFWKTMNERGLIYKGTH 133

Query: 125 SGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           SGWY++ DE +Y + ++       G          N V + EE  YFFRLS ++D+L++Y
Sbjct: 134 SGWYAVSDETFYPESQIEKVTDSNGISKMISKETKNEVIFHEESNYFFRLSKFRDRLINY 193

Query: 180 YESHPEFILPIERRNEVISFVK-SGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALT 236
            + +P+ I P  + + +++ ++   L+DLS+SR      WGI++P D    +YVW DAL 
Sbjct: 194 LKENPQLITPKNKYDSILAELEGEKLEDLSISRPSSRLSWGIEVPGDDTQRIYVWFDALI 253

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           NY+T  GY      +    WPA +HVIGKDI RFH IYWP FL++A+LPLPK++  H   
Sbjct: 254 NYITAAGY-PKSLNAPTSPWPA-VHVIGKDIARFHCIYWPIFLMAADLPLPKQIVIHSHW 311

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKSLGNV+DP++ ++  G DA R+FL        D  Y +         +L  
Sbjct: 312 LCDGFKMSKSLGNVVDPLDTLDYYGQDACRFFLSEYSNIESDSNYSEREF-HFTRENLIG 370

Query: 357 GIGNLVSRS----------VSMILKD---------YDGMIPTPGAFTESDESILSVCSRV 397
              NLV+R           V+M  +           D     P A  ++   + +    +
Sbjct: 371 KYANLVTRCGGPSFDIEESVAMSKEGSFDKIESFWEDCPYENPAAVKDAAGKLRACLDNL 430

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT------NPDRAST----- 446
              +  +++N    +A       +   ++ F   +PW   K        P++  T     
Sbjct: 431 YPAMDTHLENFDHMKATQVWWEAIEAGNQLFQLGQPWIFTKEMKNENLQPEKRETSKLVQ 490

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             ++Y+  E  R  +IL+   +P L++KI D L V+ + R  Q
Sbjct: 491 SFLVYMAAETCRIGSILMGPIMPHLSHKILDRLGVSMQKRTAQ 533


>gi|54298874|ref|YP_125243.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|68565968|sp|Q5X105|SYM_LEGPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53752659|emb|CAH14094.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 670

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 230/543 (42%), Gaps = 45/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQVLATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
           K     +Y    + +  D  V             G + +   A ++P   +         
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    
Sbjct: 181 SPVEKESEHYFFDLPLYEELLKDWTRKG---HLQAEVTNKLSEWFEAGLKQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFW-----PADLHVIGKDILR 269
           +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ 
Sbjct: 238 FGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+ 
Sbjct: 298 FHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYF 357

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + D    RVNADL   + N+ SR    I K +D  + +     +   
Sbjct: 358 AAKLNGRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKLHN 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
            +LS      + + +   ++   RA+ Q++    +V++Y DA KPW L K          
Sbjct: 418 DLLS----ARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +A    + L    E   + S+D+ L        TF P+
Sbjct: 474 ICTMGINLFRILITYLKPVLPMMAKASEEFLN--SEPLHWGSIDKPLL--NHRINTFKPL 529

Query: 507 FPR 509
             R
Sbjct: 530 MVR 532


>gi|291614999|ref|YP_003525156.1| methionyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585111|gb|ADE12769.1| methionyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 743

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 128/559 (22%), Positives = 218/559 (38%), Gaps = 56/559 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ +++A+ Y N   H+GH  E I  D+  RF ++ G    +    D HG  I   A+ 
Sbjct: 3   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGNTCHYVCADDTHGTPIMLRAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +      D      + +D++  T      +    +++ +     I     
Sbjct: 63  EGITPEQLIARVWLEHYDDFRAFHVEFDNYGSTNSAETKEFAEGIYRTLKGGNLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y    + +  D  +             G + +   A + P +               
Sbjct: 123 EQYYDPLKQMFLPDRFIKGECPKCGAKDQYGDNCEVCGAAYAPTELKNPYSAVSGTKPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDW 216
              + YFF+LSA+  +    + +    + P             G   L D  +SR    +
Sbjct: 183 RNSDHYFFKLSAHSCQQFLRHWTRSGTLQPEASNKMQEWLGAEGDNKLTDWDISRDAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           G +IPD P    YVW+DA   Y+ +          S   +W         H IGKDIL F
Sbjct: 243 GFQIPDAPGKYFYVWLDAPVGYMGSFKQLCKAKGLSFDDYWRKGSNAELYHFIGKDILYF 302

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL- 329
           HA++WPA L  A    P ++F+HGF+   GEK+SKS G  I     ++ V       +  
Sbjct: 303 HALFWPAMLQHAGFRTPTRLFAHGFLTVNGEKMSKSRGTFITARSYVDHVKNTEYLRYYY 362

Query: 330 -VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SD 387
             +     +D     D    RVN+DL     N+ SRS   I K + G +       + +D
Sbjct: 363 AAKLNGTMEDIDLSLDDFVARVNSDLIGKYINIASRSAGFISKRFGGKLADHVLLAKCAD 422

Query: 388 --------------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                         +++L +      +I E  + +   +A   V +L+  ++ Y DA KP
Sbjct: 423 TSGLAGKLVEDHPKQNLLQILQDASAQIAELYEARDYSKATRTVGTLLDLINAYIDATKP 482

Query: 434 WELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           WEL K   N +    V  V ++  R + I L+  +P+LA  +   L V +    +Q    
Sbjct: 483 WELAKDPSNVEWLQGVCSVALQAFRIITIYLKPVLPQLARDVESFLNVGE--LRWQDAQT 540

Query: 492 RLKPGFMLHKTFDPIFPRF 510
            L     ++ T+  +  R 
Sbjct: 541 LLPDQHSIN-TYQHLMTRL 558


>gi|289662871|ref|ZP_06484452.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 692

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 123/541 (22%), Positives = 205/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIASIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYTKLEGAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDSFLREWLAGDVALPGVKAKLKEWLD-TEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L            +A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLRAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVIRPLTS-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|71274586|ref|ZP_00650874.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Dixon]
 gi|71898125|ref|ZP_00680311.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|170730848|ref|YP_001776281.1| methionyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|226710941|sp|B0U472|SYM_XYLFM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71164318|gb|EAO14032.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Dixon]
 gi|71732099|gb|EAO34155.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|167965641|gb|ACA12651.1| methionyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 702

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 208/538 (38%), Gaps = 43/538 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++TA+ Y N   H+GH    I AD+  R  RL G +  F    D HG  I  AA+ AG+
Sbjct: 17  LVTTALPYANGPLHLGHLVGYIQADIWVRARRLGGHNTWFVCADDTHGTPIMLAAEKAGM 76

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + F+     +        ++++D +  T    +       +  +   G I     + +
Sbjct: 77  PPEAFIATTQASHERDFAAFNVAFDHYDSTHSPVNRHLTEQSYLTLKQAGHITCRSVAQF 136

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QWMEE 162
           Y      +  D  V             G + +   A ++P               +  + 
Sbjct: 137 YDPAKGMFLPDRYVKGTCPNCGATDQYGDNCEACGATYDPTELKNPYSVISGATPELRDS 196

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF ++ +   L  +            +  E +   K GL+   +SR    +G +IPD
Sbjct: 197 EHFFFEVAHFDTFLRHWLSGDVALPSVKNKLKEWLD-AKGGLRPWDISRDAPYFGFEIPD 255

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            P    YVW+DA   YL +   L            ++       H IGKDI+ FHA++WP
Sbjct: 256 QPGKYFYVWLDAPIGYLCSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWP 315

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR-EIA 334
           A L       P ++  +G++   G K+SKS G  I         +  DALRY+       
Sbjct: 316 AVLHGTGRCAPTRLHVNGYLTVDGAKMSKSRGTFIMARTYLDAGLEPDALRYYFAAKSSG 375

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVNADL   + NL SR  S I   ++G +         D       
Sbjct: 376 DVDDLDLNLSDFVARVNADLVGKLVNLASRCASFIGTRFNGQLADI----LPDRIQYDQF 431

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTV 452
              L  IR+  +      A+ Q + L  E ++Y D  KPW + K +    +   V    +
Sbjct: 432 VAALTPIRDAYERNDTASAIRQTMQLADEANKYIDETKPWIIAKQHHADAQLHAVCTQGL 491

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + R L   L+  +P  +  I    F+A     +Q ++Q L  G  + + + P+F R 
Sbjct: 492 NLFRVLITALKPILPHTS--IQAETFLAAPVTTWQDVNQPLTGGHTI-QPYSPLFTRI 546


>gi|238757204|ref|ZP_04618391.1| Methionyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704582|gb|EEP97112.1| Methionyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 650

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 128/521 (24%), Positives = 221/521 (42%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  RF R+ G  V F    D HG  I   AQ  G+  +  + + S+  +   
Sbjct: 1   MLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQMGIEPEQMIAEMSQEHQQDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141
               ISYD++  T    + +   +++ ++   G I     S  Y      +  D  V   
Sbjct: 61  AGFAISYDNYHSTHSDENRELSSLIYSRLKANGHIKNRTISQLYDPEKGMFLPDRFVKGT 120

Query: 142 --------YKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                     G + +   A ++P +                E E +FF L A+ D L ++
Sbjct: 121 CPKCKAPDQYGDNCEVCGATYSPTELINPQSAVSGATPVMRESEHFFFDLPAFSDMLQAW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  +  N++  + +SGL+   ++R    +G ++PD P    YVW+DA   Y+
Sbjct: 181 TRSGA---LQEQVANKMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +        +FW  D      H IGKDI+ FH+++WPA L  +N   P  VF 
Sbjct: 238 GSFKNLCDKRGDIDFDEFWREDSKTDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  I     ++ +  D LRY+   +++    D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSRGTFIKAGTYLQHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N + NL SR+   I K + G +    A   +D  +    +     I +   ++   
Sbjct: 358 ADIVNKVVNLASRNAGFINKRFGGKL----ADQLADPVLYKTFTDAAVSIADAYTSRESS 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +A+ ++++L    +RY D Q PW + K          +  + + + R L   L+  +P L
Sbjct: 414 KAIREIMALADVANRYVDEQAPWVVAKEEGRDADLQAICSMGINLFRVLMTYLKPVLPSL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +    L        +  ++Q L  G  ++  F  +F R 
Sbjct: 474 TERTEAFLNTE---LTWDGIEQPLL-GHQINA-FKALFNRI 509


>gi|229105649|ref|ZP_04236282.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228677785|gb|EEL32029.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 544

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 129/538 (23%), Positives = 231/538 (42%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKT-FDWGIKI 220
           E ++F L  +Q+++    E   +              +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQKGTWRDNAIQLTERYVKEGLQDRAVSRDLPVGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + +  + +       +FW       +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG++P        +E +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPN----RIINEELKEKIE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +   + E+++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYINVGESIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L +   N          +P  ML    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNMLPNKIDSVQPLFERI 527


>gi|42784223|ref|NP_981470.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|68565988|sp|Q72Y44|SYM1_BACC1 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|42740154|gb|AAS44078.1| methionyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987]
          Length = 544

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 126/539 (23%), Positives = 229/539 (42%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRNLGFTYDCYTRTDSEHHHKTVQKVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSAPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E ++F L  +Q+++    E+  +              +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKVAVETAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDREAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGTIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I     LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFVNLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPNRIDSVQPLFERI 527


>gi|241956011|ref|XP_002420726.1| methionyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223644068|emb|CAX41811.1| methionyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 748

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 112/550 (20%), Positives = 222/550 (40%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G     
Sbjct: 184 SDERNILITSALPYVNNVPHLGNIVGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATET 243

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+ +KG + 
Sbjct: 244 KALEENVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFMKLHNKGYLE 303

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      Y    +++  D           Y+ A G   +   N +  +E      ++   
Sbjct: 304 EKTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGN 363

Query: 173 ------------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                             +       +S  +       +N   S++K GL+   ++R   
Sbjct: 364 TPVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSKNSKNITDSWIKRGLEPRCITRD-L 422

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADL---HVIGK 265
            WG  + +    + ++YVW DA   Y+          +  D  K    P ++     +GK
Sbjct: 423 IWGTPVPLKGYDKKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWRNPENVDLYQFMGK 482

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 483 DNVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNAKETGVSP 542

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N++L   +GN V+R V  ++  Y+G+IP    
Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602

Query: 383 FTESDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D     +  + +L    +NM+N  + + L   +++ S  +++    K    L    
Sbjct: 603 KNIPDYGKFETDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P ++  V+ V + ++  ++ ++  F+P+   KI  IL     +   +  +  L PG  + 
Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTAKIDQILNAPALSITNK-FELVLLPGHCIG 721

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 722 KA-QYLFTRI 730


>gi|326333771|ref|ZP_08200004.1| methionine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948353|gb|EGD40460.1| methionine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 601

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 148/580 (25%), Positives = 243/580 (41%), Gaps = 83/580 (14%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +G+DEHG  I  AA  AG+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILIAADEAGMTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +  VD+N R   +    L ++YD + RTT   HH   + L+  + + G   +    G  S
Sbjct: 68  QELVDKNHRIIVEDLTSLGLTYDLYTRTTSANHHSVVQELFLGVYNNGYFVEQTSKGAIS 127

Query: 130 LRDE-----AYYNDDEVYKGADGQYYNAQH------------NPV--------QWMEEEG 164
                     Y        G DG   +               NPV        +++E + 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPDQLINPVSKINGETPEFIETQH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A  D L ++ +   +  L           +   ++  +++R   DWGIK+P D 
Sbjct: 188 FFLDLPALADALHAFLDDREQTGLWRPNVIRFSQNILKEIRPRAMTRD-IDWGIKVPLDG 246

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
               P   MYVW DA+  YL+ +        +    + W  D      + +GKD + FH+
Sbjct: 247 WRDNPTKRMYVWFDAVIGYLSASIEWARRSGNPEAWRDWWNDPEALSYYFMGKDNIVFHS 306

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WPA LL+ N              L LP +V S  ++  +G+K S S   VI   +++ 
Sbjct: 307 QIWPAELLAYNGQGSKGGQPGAYDTLNLPTEVVSSEYLTMEGKKFSSSKKIVIYVRDLLS 366

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               DA RYF+        D  +      +R N +L  G GNLV+R+ ++I K++  + P
Sbjct: 367 RYQPDAFRYFVAAAGPESNDSDFTWAEFVRRTNDELVAGWGNLVNRTATLIAKNFGELPP 426

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G  TE+D++IL         + + +      +A+ + +  V EV++Y    +PW+L K
Sbjct: 427 A-GTLTEADKAILDTVGGAFATVGDLIGRHRQKQAIGEAMRAVGEVNKYVTDLEPWKLAK 485

Query: 439 T--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ----- 491
              + +R  TVL+V  + +  L ++L  F+P  AN+I   L    E      +++     
Sbjct: 486 DPSDRERLGTVLHVMAQCVADLNLILSPFLPFSANEIDKALGGKGEVAPMPRVEEVEDLD 545

Query: 492 ---------------------RLKPGFMLHKTFDPIFPRF 510
                                 +  G  + K   P+F + 
Sbjct: 546 TGKPYPIITGDYSGAPAWQRHPIVVGTPVAKP-TPVFQKL 584


>gi|218900185|ref|YP_002448596.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226695273|sp|B7INU9|SYM_BACC2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218544443|gb|ACK96837.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 544

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 236/538 (43%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E+       +   ++ 
Sbjct: 123 AYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTF-DWGIKI 220
             +Y +   F                 R N +     +VK GL+D  +SR       I +
Sbjct: 183 EHFYFALHTFQQQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRVVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
                  +YVWI+A+  Y + + Y  +       +FW +D    +V GKD + FH+I WP
Sbjct: 243 KGYEDKKIYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG++P      E    +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVE----LKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  + +I
Sbjct: 419 GLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIYNCIYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++   L +   NR ++       P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRSTLSIV--NRNWE-------PQNTLPNRIDSVQPLFERI 527


>gi|289670254|ref|ZP_06491329.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 692

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 123/541 (22%), Positives = 205/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIASIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYTKLEGAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLAGDVALPGVKAKLKEWLD-TEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L            +A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLRAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVIRPLTS-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|294626909|ref|ZP_06705500.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598769|gb|EFF42915.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 691

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 204/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANVQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYAKLDAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDTAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLRQWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G        A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFQAHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ +   L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVIGPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|229147584|ref|ZP_04275929.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228635874|gb|EEK92359.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
          Length = 544

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEKIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKRVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|33599829|ref|NP_887389.1| methionyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|68565999|sp|Q7WP45|SYM_BORBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33567426|emb|CAE31339.1| methionyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 692

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 135/554 (24%), Positives = 238/554 (42%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       D   I +D +  T    +    + +++ +  +G I     
Sbjct: 63  EGITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P + +             
Sbjct: 123 EQFYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSL 209
              + +FF+LS      +  +  +         L  E + +   +      ++ L D  +
Sbjct: 183 KSSDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLGGDDGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVI 263
           SR    +GI+IPD P    YVW+DA   YL +        G        PA     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPAGPTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P ++  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYLEIGMDA 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY++  +  A  +D  ++ +    RVN+DL     N+ SR+ + I + +DG +   G
Sbjct: 363 EWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGELAYDG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                 +++ +  ++  + IR   + +  +RA+ ++++    +++ FDA +PW + K   
Sbjct: 423 DT----DALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGIG 478

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQ 491
                   R   +    +   + L+++L   +P LA+++   LF A+ +  +   Q L Q
Sbjct: 479 AADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLPQ 538

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  DP
Sbjct: 539 RVAPFKHLMQRVDP 552


>gi|21242139|ref|NP_641721.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25009359|sp|Q8PMP0|SYM_XANAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21107551|gb|AAM36257.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 694

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 123/541 (22%), Positives = 204/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANVQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------FWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G   +            H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGENFEAHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ +   L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVIGPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|115378722|ref|ZP_01465869.1| hypothetical protein STIAU_7318 [Stigmatella aurantiaca DW4/3-1]
 gi|115364272|gb|EAU63360.1| hypothetical protein STIAU_7318 [Stigmatella aurantiaca DW4/3-1]
          Length = 698

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 129/533 (24%), Positives = 224/533 (42%), Gaps = 39/533 (7%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           + Y N   HIGH  E +  D+  RF R  G +V++    D HG  I   A   G+  + F
Sbjct: 1   LPYANGPIHIGHVVEYVQTDIYVRFLRSCGKNVVYFCADDTHGTPIELNAAKQGLKPEEF 60

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           V +     R      DIS D F  T    +     +++ ++ +KGDI +      Y  +D
Sbjct: 61  VARCYELHRKDFADFDISVDYFHSTHSPENRAYSELIYGRLKEKGDIERRDIEQTYCEKD 120

Query: 133 EAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD---KLLS 178
           + +  D  +             G   +     ++P   ++           +     L  
Sbjct: 121 KRFLPDRFIKGTCPNCKAKDQYGDSCEKCGKAYSPTDLIDPHCSLCGTPPVRKRSTHLFF 180

Query: 179 YYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
               H  F+  + RR   ++         F + GL D  +SR    +G  IP +     Y
Sbjct: 181 KLSRHEAFLRELLRRPGFLNQGLATQLQGFFEKGLADWDISRDGPYFGFAIPGETDKYFY 240

Query: 230 VWIDALTNYLTTTGYLDNPDGSKA---KFWPAD-----LHVIGKDILRFHAIYWPAFLLS 281
           VW+DA   Y+ TT       G       +W  D     +H IGKDI+ FHA++WPA L  
Sbjct: 241 VWLDAPIGYIATTEKWAQETGKAKSALDYWGPDSNTRIVHFIGKDIVYFHALFWPAVLKV 300

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGF 340
           A+L  P +V +HG +   GEK+SK+ G +I   + ++++    LR+F    +    +D  
Sbjct: 301 ADLHGPDEVKAHGHLTVNGEKMSKTRGTLIPARDYLDKLDPSYLRFFYAACLGSGPEDFD 360

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                 + RVN +L N +GNL +R+++M+    +  +      T + ++++      + E
Sbjct: 361 LSLKDFRLRVNGELVNNVGNLANRALTMLAGPLEKRLAPGS--TGAGKALVEAALARVPE 418

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +RE  +      A+  ++ +    + +  AQ PW   KT+ + A   L    +V+  L  
Sbjct: 419 VREAFEKLEYRNAIKAIVEISQTANAFLQAQAPWAKVKTDAEGARADLSDAADVVYLLGA 478

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT---FDPIFPRF 510
           LL   +P++ +K+F  L        F +L+    P     +     +P+ PR 
Sbjct: 479 LLAPVIPRVTDKLFAQLGAPP--LTFAALETARYPLLDRSRPIGTPEPLLPRL 529


>gi|56477937|ref|YP_159526.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|68565963|sp|Q5P239|SYM_AZOSE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56313980|emb|CAI08625.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 718

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 123/550 (22%), Positives = 207/550 (37%), Gaps = 59/550 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I  D+  R+ R+ G  V +    D HG  +   A+ 
Sbjct: 3   RKILVTNALPYANGDIHLGHLVGYIQGDIWVRYQRMRGNTVHYVCADDTHGTPVMLRAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + +             +++D++  T    +      ++ K+     I     
Sbjct: 63  EGITPEALIGRVHGEHLRDFTDFGVAFDNYHSTHSVENRAYAEDVYTKLKAAELIDTRAI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y    E +  D  +             G + +   A + P +               
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAADQYGDNCEACGAAYAPTELKNPHSAVSGAKPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKD 206
              E YFFRLS      +  +      +     L +E  N++  ++           L D
Sbjct: 183 KTSEHYFFRLSDPRAVAFLREWTRGTNAAGTRRLQVEAANKMKEWLGDETVGDGGNTLSD 242

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------- 259
             +SR    +G +IP  P    YVW+DA   Y  +   L    G  A     D       
Sbjct: 243 WDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYFASFRNLAEQRGDIAVDDFTDAVRAETA 302

Query: 260 ----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
               +H IGKDIL FHA++WPA L  A    P ++  +GF+   G K+SKS G  I    
Sbjct: 303 GTEMVHFIGKDILYFHALFWPAMLRFAGYRTPTQLCVNGFLTVDGAKMSKSRGTFITARS 362

Query: 316 VIEE-VGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +   +  + LRY+   +     +D     D +  +VN+DL     N+ SR    I K +
Sbjct: 363 YVSRGLNPEWLRYYFATKSNGTMEDVDLSLDDMVAKVNSDLVGKYVNIASRCAGFIAKRF 422

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           DG +        +D       +     I    + +   RAL +++ L    ++Y +  KP
Sbjct: 423 DGKLGASDPQATADFE----AAFAAGTIAHAYEERDYGRALREIMRLADLANQYVNDHKP 478

Query: 434 WELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           WEL K     A    V    +   R L + L+  +P LA K+   L +  +   +    Q
Sbjct: 479 WELAKQEGQEAHLHVVCSTALTHFRDLTLYLKPVLPALAQKVEAFLAI--DPLVWPQTWQ 536

Query: 492 RLKPGFMLHK 501
            L     ++ 
Sbjct: 537 PLPAAHTINP 546


>gi|33595447|ref|NP_883090.1| methionyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|68565998|sp|Q7W1D8|SYM_BORPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33565525|emb|CAE40164.1| methionyl-tRNA synthetase [Bordetella parapertussis]
          Length = 692

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 135/554 (24%), Positives = 238/554 (42%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       D   I +D +  T    +    + +++ +  +G I     
Sbjct: 63  EGITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P + +             
Sbjct: 123 EQFYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSL 209
              + +FF+LS      +  +  +         L  E + +   +      ++ L D  +
Sbjct: 183 KSSDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLGGDDGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVI 263
           SR    +GI+IPD P    YVW+DA   YL +        G        PA     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAAKGLDFDALLDPAGPTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P ++  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYLEIGMDA 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY++  +  A  +D  ++ +    RVN+DL     N+ SR+ + I + +DG +   G
Sbjct: 363 EWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGELAYDG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                 +++ +  ++  + IR   + +  +RA+ ++++    +++ FDA +PW + K   
Sbjct: 423 DT----DALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGIG 478

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQ 491
                   R   +    +   + L+++L   +P LA+++   LF A+ +  +   Q L Q
Sbjct: 479 AADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLPQ 538

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  DP
Sbjct: 539 RVAPFKHLMQRVDP 552


>gi|30023071|ref|NP_834702.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229130292|ref|ZP_04259251.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|68566040|sp|Q815U6|SYM2_BACCR RecName: Full=Methionyl-tRNA synthetase 2; AltName:
           Full=Methionine--tRNA ligase 2; Short=MetRS 2
 gi|29898631|gb|AAP11903.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228653225|gb|EEL09104.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 544

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   DQ    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKRSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|57234814|ref|YP_181133.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123773627|sp|Q3Z9G6|SYM_DEHE1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57225262|gb|AAW40319.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 553

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 139/541 (25%), Positives = 237/541 (43%), Gaps = 39/541 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  R F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHRLFMASWPKLGISWDCYTSTATANHARTAQQMFLSLYEKGYIYKDT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQ 158
               +      +  D  V                                      NP +
Sbjct: 123 VCQPFCPHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++L  + E+   +       N  + ++K GLKD +++R   DWG+
Sbjct: 183 FRETEHFFLKLSAFEEELTHWVETKTYWR--TNVLNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD---LHVIGKDILRF 270
            +P        +YVW +A+  YL+ +              K+W  D    + IGKD + F
Sbjct: 240 PLPLPGYEGKRLYVWFEAVIGYLSASIEWAASKGQPDEWQKYWGGDTKSYYFIGKDNIPF 299

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+    L LP  V S+ ++  + +K SKS    I   +V+    VD LRY L
Sbjct: 300 HTIIWPAMLMGRGGLDLPYDVPSNEYLTIEAQKFSKSRNKAIWVDDVLSRYSVDTLRYLL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +      +R N +L    GNL  R ++M+ +++D  +P  G   E   +
Sbjct: 360 SANMPESSDMDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNFDNKVPEYGELDERSLN 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++   S +L E  + +       A+   +SL  E +RY D + PW+  K +   A+  LY
Sbjct: 420 LIEKTSAMLFETDKALHGCNFREAIKLAMSLAQEANRYLDEKAPWKEIKVDKAAAARSLY 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V +  +  L +    F+P+ ++++   L    E      + +    G  +    +P+F +
Sbjct: 480 VAMAALSGLRVAFYPFLPESSSRLSTYLGFGSEIEKDGWVLKMPVAGQEMI-PPEPLFKK 538

Query: 510 F 510
            
Sbjct: 539 L 539


>gi|260769036|ref|ZP_05877970.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617066|gb|EEX42251.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 658

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 128/521 (24%), Positives = 215/521 (41%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMTPEEMIAAVSEEHQKDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T  + + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSENQYGDNCDACGETYSPTELINPKSAVSGATPIMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYVWLDAPVGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L N        ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 ASFKNLCNKTDGLDFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   +  +   D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +DG +    A  E     ++   R    I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSDSFAEPELYNEFVAAADR----IAELYEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLLTYLKPVMPGL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   +  + Q L  G  +   F  +F R 
Sbjct: 474 AARTEAFLN---QELTWDGVAQPLT-GHTISA-FKALFNRI 509


>gi|256426015|ref|YP_003126668.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040923|gb|ACU64467.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 693

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 133/531 (25%), Positives = 231/531 (43%), Gaps = 44/531 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I+ A+ Y N   HIGH A   I AD+  R+ R    DV F  GTDEHG  I 
Sbjct: 1   MAKFNRYLITAALPYANGPVHIGHLAGCYIPADIYVRYLRAKKADVKFIGGTDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    VT +  VD+  +   D    + IS+D F RTT++ HH+T    +K + DKG  
Sbjct: 61  IKAMKENVTPQDIVDKYHKIIYDSFTDMGISFDIFSRTTKQVHHETAADFFKTMYDKGLF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG---- 164
            +     ++      +  D  +             G   +      +P + +E       
Sbjct: 121 EEKESEQFFDETANVFLADRYIVGTCPKCGNPNAYGDQCERCGTSLSPDELIEPRSTLSN 180

Query: 165 --YFFRLSAYQDKLLSYYESHPEFI-------LPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + + +    L  YE   +                +  S++  GL+  +++R +  
Sbjct: 181 AVPVKKKTKHWYMPLQNYEPFLKEWLLEGHKEWKNNVYGQCKSWIDGGLQSRAMTRDS-S 239

Query: 216 WGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHA 272
           WGI   +PD    ++YVW DA   Y++ T  L               +H IGKD + FH 
Sbjct: 240 WGIQVPLPDAEGKVLYVWFDAPIGYISATKELTANWADYWCKDDTKLVHFIGKDNIVFHC 299

Query: 273 IYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFL 329
           + +PA L       LP+ V ++ F+  + EK+S S    +   + +++     D LRY L
Sbjct: 300 VIFPAMLKGHGGYVLPENVPANEFLNIESEKVSTSRNWAVWVHDYVKDFPDQQDVLRYVL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESD 387
                  KD  +     ++R N++L +   N V R++ ++ K  +G +P   A    E D
Sbjct: 360 TSIAPETKDSDFTWKDFQQRNNSELTDIFSNFVHRTMVLMHKLCNGKVPAFHADLKDEKD 419

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRA 444
           +++ +  +   Q I ++++N     ALA+VI +    ++Y   ++PW+L      +P  A
Sbjct: 420 DALFAALTASKQRIEDSLENFRFREALAEVIDISRSGNKYLQEREPWKLASAMAKDPSLA 479

Query: 445 ST-------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +         L++ +++   LAIL+  F+P  A KI  +L V D    +++
Sbjct: 480 AANQKQIDNCLHLCLQLTANLAILVNPFLPFTAKKICHMLKVVDRMLEWEN 530


>gi|166712769|ref|ZP_02243976.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 694

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 123/541 (22%), Positives = 205/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIASIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYTKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGQFDGFLREWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           +P  P    YVW+DA   YL +   L    G        D       H IGKDI+ FH +
Sbjct: 242 MPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFAAHLVDGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----AEALPDTAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDSADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRVLVAALKPILPRTCAEAEAFLSAP--MTSWEDVIRPLTS-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|254373902|ref|ZP_04989384.1| hypothetical protein FTDG_00056 [Francisella novicida GA99-3548]
 gi|151571622|gb|EDN37276.1| hypothetical protein FTDG_00056 [Francisella novicida GA99-3548]
          Length = 686

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 120/544 (22%), Positives = 226/544 (41%), Gaps = 42/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I  
Sbjct: 10  VTKMRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIML 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+T +  V + S          +I++D++  T    + +    ++ K+++K  I 
Sbjct: 70  KAKSLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 129

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           K   +  Y    + +  D            E   G   +   A ++P + +         
Sbjct: 130 KKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQ 189

Query: 170 SAYQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S  Q     ++                  +L  E  N++  + + GL+   +SR    +G
Sbjct: 190 SPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFG 249

Query: 218 IKIP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
             IP  + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ 
Sbjct: 250 FAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIY 309

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+ 
Sbjct: 310 FHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYF 369

Query: 330 V-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             R  +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D+
Sbjct: 370 ASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDQ 425

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   
Sbjct: 426 ELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQ 485

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + + L   L+  +P +  +    L +  +   +    + L     + K F P+
Sbjct: 486 VCSQGINMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFLT-NHKIDK-FKPL 541

Query: 507 FPRF 510
             R 
Sbjct: 542 ATRI 545


>gi|229515418|ref|ZP_04404877.1| methionyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347187|gb|EEO12147.1| methionyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 658

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 124/521 (23%), Positives = 212/521 (40%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T    + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   +      D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +DG +    A  E    + +  +     I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE----LYAEFAGAADRIAELFEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   ++ +   L         F  +F R 
Sbjct: 474 AERTEAFLN---QELTWEGVATPLT--DHAVTPFKALFNRI 509


>gi|119505636|ref|ZP_01627707.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458579|gb|EAW39683.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 547

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 126/537 (23%), Positives = 228/537 (42%), Gaps = 43/537 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + +++A+ Y NA  H+GH  E +  D+  RF R  G   L+    D HG  I  AA+ 
Sbjct: 6   RNILVTSALPYANAPLHLGHILEQVQTDIWVRFQRSRGNHCLYVCADDAHGTAIMLAAEK 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           +  + +  ++    N    +    I++D++  T    +      ++ ++  +G I     
Sbjct: 66  SETSPEEHIEAVRLNHLADSTGFLINFDNYGSTHSPENQKWSNEIFSRLEAQGHIGSREI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           +  +      +  D  +             G + +   A ++P   ++            
Sbjct: 126 TQAFDPDKGLFLADRFIKGTCPRCKAPDQYGDNCEACGATYSPTDLIDPVSALSGAVPIE 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E  FF+LS +Q+ L  +  S     L    RN++  ++ +GL+D  +SR    +G +
Sbjct: 186 KASEHLFFQLSHFQELLEDWTASGS---LQPAIRNKLSEWIDAGLQDWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFW-----PADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   Y+ +   Y    +    K+W         H IGKDI+ FH +
Sbjct: 243 IPGHPGKYFYVWLDAPIGYIASCLDYCQRENEDFDKWWQLGHDTELYHFIGKDIINFHGL 302

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L +A L LP  +++HGF+   G K+SKS G  I     ++ +  + LRY+   ++
Sbjct: 303 FWPAMLQAAGLRLPTAIYAHGFLTVDGTKMSKSRGTFIHASAYLKHLDPEYLRYYFAAKL 362

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + D   KRVN+DL   + N+ SR    + K +   +           +++ 
Sbjct: 363 GAGVDDFDLNLDDFVKRVNSDLVGKVVNIASRCAGFLRKKFANTLSDHCEEP----ALVQ 418

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYV 450
                  +I    + +   RA+ ++I+L  + ++Y D +KPW L K          V  V
Sbjct: 419 GFIAAGDDIAALYEAREFSRAMREIIALADQANQYIDEKKPWVLAKEPGKESEVQAVCSV 478

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHKTFDP 505
            + + R L   L+  +P +A +    L ++ +    +S  L   L     L +  DP
Sbjct: 479 GINLFRVLITYLKPVLPVMAERSEAFLKISLDWHLLESPLLGHELDDFKQLLQRVDP 535


>gi|229158640|ref|ZP_04286698.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228624624|gb|EEK81393.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 544

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRSLGFTYDCYTRTDGEHHHETVQNVFLRLLEEGHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWGKEAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P        D  +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGS----IDVELKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYKHVGEAIEQTKFKVALEAIFDAVRFANKYFDERQPWKQREDDPVLCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPNRIDSVQPLFERI 527


>gi|67474236|ref|XP_652867.1| methionyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56469764|gb|EAL47481.1| methionyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 754

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 116/539 (21%), Positives = 229/539 (42%), Gaps = 41/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G     ++ ADV AR+ R+ G + L+  GTDE+G    + A 
Sbjct: 14  RNILITSALPYCNNVPHLGTLIGCVLSADVYARYCRMRGYNTLYVCGTDEYGTTTEQKAL 73

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     +++ D  DIS++ F RT+ ++  +  + ++K ++D G IYK  
Sbjct: 74  LEHCTPQEICNKYYTLHKEVYDWFDISFNYFGRTSTEKQTEITQDIFKHLNDNGYIYKDS 133

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFF----- 167
              +Y  + + +  D  V            +G          N V+ +  +         
Sbjct: 134 VEQFYCEKCDKFLADRFVEGVCPFCNAPGARGDQCDSCQKLINTVELINPQCKVCHSVPV 193

Query: 168 -RLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKDLSLSRKT--FDWGIK 219
            R S +    L   +              E  N      K+ L +L     T    WG K
Sbjct: 194 RRSSEHLFIDLPKLQDKLGNWANETMSKYEWPNNCACATKTWLNNLKGRCITRDLKWGTK 253

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI-----GKDILRFHA 272
           +P +     + YVW DA   YL+      N      K+W  + HV      GKD + FH+
Sbjct: 254 VPLEGFENKVFYVWFDAPIGYLSI---TANYTDDWKKWWMDNEHVELTQFLGKDNIVFHS 310

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P+ LL       + +K+ +  ++ ++  K SKS G  +   + ++  +  +  RY+L
Sbjct: 311 VLFPSTLLGTGESWTMVRKLATTEYLNYEDCKFSKSNGTGVFGDDAMKTGIPPEVWRYYL 370

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
           +       D  +  + L ++ N +L   IGNL  R+++  +K++D  IP      TE + 
Sbjct: 371 LINRPEQSDTVFLWNDLMEKNNNELLKNIGNLAQRTLTFAVKNFDNKIPKKITKITEVEL 430

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +       + +E    M+N  +   L   +++ S  ++Y      W+  K++ +RA   +
Sbjct: 431 NCEKEIKELYKEYLNAMENVKLKEGLKIAMAISSVGNKYLQDTAAWKTIKSDKERAGDEI 490

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           Y  + ++  ++++L  ++P+   K+ + + +        +    L  G  +    + IF
Sbjct: 491 YYALNILYFVSLVLDPYIPEFGKKVREQMNLP--AIPLPNDFGLLLEGETMLGKVEVIF 547


>gi|78046997|ref|YP_363172.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123757531|sp|Q3BVP1|SYM_XANC5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78035427|emb|CAJ23072.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 694

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 205/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYAKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDTAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLAGDVALPGVKAKLKEWLD-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G        A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFASHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFDGKL----ADALPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIREAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ + + L     + + +  +F R
Sbjct: 478 QGLNLFRILVAALKPILPRTCAEAEAFLSAP--MTSWEDVVRPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|156975200|ref|YP_001446107.1| methionyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156526794|gb|ABU71880.1| hypothetical protein VIBHAR_02927 [Vibrio harveyi ATCC BAA-1116]
          Length = 661

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 126/521 (24%), Positives = 218/521 (41%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQKDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T  + + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQWMEE--------------EGYFFRLSAYQDKLLSY 179
                 E   G +       ++P + ++               E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEENKFFYVWLDAPVGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +        ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 ASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     ++ +  + LRY+   +  +   D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K ++G +    A  E     ++   R    I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFVAAADR----IAELYETREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   ++ +   L  G  + K F  +F R 
Sbjct: 474 AARTEAFLN---QELTWEGIAAPLT-GHEITK-FKALFNRI 509


>gi|33591426|ref|NP_879070.1| methionyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|68565997|sp|Q7W0F7|SYM_BORPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33571068|emb|CAE40559.1| methionyl-tRNA synthetase [Bordetella pertussis Tohama I]
          Length = 692

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 135/554 (24%), Positives = 238/554 (42%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       D   I +D +  T    +    + +++ +  +G I     
Sbjct: 63  EGITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALSQEIYRALKSEGLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P + +             
Sbjct: 123 EQFYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELINPYSALTGAAPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSL 209
              + +FF+LS      +  +  +         L  E + +   +      ++ L D  +
Sbjct: 183 KSSDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQAKTREWLVGDDGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVI 263
           SR    +GI+IPD P    YVW+DA   YL +        G        PA     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAAKGLDFDALLDPAGPTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P ++  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGEKMSKSRGTGISPLRYLEIGMDA 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY++  +  A  +D  ++ +    RVN+DL     N+ SR+ + I + +DG +   G
Sbjct: 363 EWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKYVNIASRAAAFITRHFDGELAYDG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                 +++ +  ++  + IR   + +  +RA+ ++++    +++ FDA +PW + K   
Sbjct: 423 DT----DALAAEFAQQAESIRAAFEAREYNRAVREIMAHADRINQAFDAAQPWVMAKGIG 478

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQ 491
                   R   +    +   + L+++L   +P LA+++   LF A+ +  +   Q L Q
Sbjct: 479 AADAATRARLQDICSRALAGFKALSVMLAPVLPALASRVARELFGANADFAWGDAQQLPQ 538

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  DP
Sbjct: 539 RVAPFKHLMQRVDP 552


>gi|315185895|gb|EFU19660.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 719

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 118/541 (21%), Positives = 229/541 (42%), Gaps = 44/541 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I++A+ Y N  PH+G+  +++ ADV AR+ R  G + L+  GTDE+G      A 
Sbjct: 2   KKKRLITSALPYVNNVPHLGNLIQVLSADVFARYCRSAGYETLYVCGTDEYGTATETRAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D+      ++ +  +I +D + RT+   H    + ++ K+   G I +  
Sbjct: 62  EEGISPKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIKERT 121

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
               YS + + +  D  V            +G   ++     +P + ++           
Sbjct: 122 IQQLYSEKSDMFLADRYVRGTCPHCGYEDARGDQCEHCGKLLDPTELIDPRSAIDGSTPV 181

Query: 167 FRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            R + +    L       +                     S+++ GL++  ++R    WG
Sbjct: 182 LRETKHLYLDLPALLPKLKAWMEKASVEGRWATNAIRMTESWIRDGLRERCITRD-LKWG 240

Query: 218 IKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
           + +P       + YVW DA   Y++ T    +      K  P ++     IGKD + FH 
Sbjct: 241 VPVPKPGYENKVFYVWFDAPIGYISITATYTDRWEEWWKN-PDEVELYQFIGKDNIPFHT 299

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P+ LL         K + S  ++ ++  K SKS G  +   +  +  +  D  R++L
Sbjct: 300 VIFPSTLLGTGEEWTLLKTMSSTEYLNYESGKFSKSRGVGVFGNDAKDTGIPADVWRFYL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                   D  +     +++VN +L     NLV+R++S I + Y G IP       +D +
Sbjct: 360 FYNRPETSDYTFTWKDFQEKVNGELIGNFANLVNRTLSFIHRFYQGRIPEA----PTDTA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                  + ++I E ++   +  A   V +L    ++ F A +PW+ +  NP+ A  +L 
Sbjct: 416 FWGRVRELEEKITEYLEGAQLRDAFRTVFALSDLGNKAFQAGEPWKTRTENPEEAEKLLR 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               ++R LAIL++ ++P  + +I + L        +  L  RL+ G    +  + +F R
Sbjct: 476 HLAYLVRDLAILVEPYLPATSRRILEFLGNPP--ATWAQL-GRLE-GLSEVRKPEILFER 531

Query: 510 F 510
            
Sbjct: 532 L 532


>gi|163942754|ref|YP_001647638.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229558040|sp|A9VP41|SYM_BACWK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|163864951|gb|ABY46010.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 544

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 124/538 (23%), Positives = 223/538 (41%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKI 220
           E ++F L  +Q ++    E   +              ++K GL+D ++SR       I +
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQKGTWRDNAIQLTERYLKEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKHWVEETGKDDQEFWDKEAKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G +P        D  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGS----IDVELKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L          S+    +P   L    D   P+F R 
Sbjct: 479 ANFAQLLEPFLPFSSERVRNTL---------SSVKVNWEPQNTLPNRIDNVQPLFERI 527


>gi|328855021|gb|EGG04150.1| hypothetical protein MELLADRAFT_89644 [Melampsora larici-populina
           98AG31]
          Length = 482

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 176/456 (38%), Positives = 257/456 (56%), Gaps = 14/456 (3%)

Query: 47  FTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             TGTDEHG KI +AA     T     D  S  FR++A   +I Y DFIRTTE RHH   
Sbjct: 1   MITGTDEHGIKIERAAIKNHQTPAELCDSVSIRFRELAKAGNIGYGDFIRTTESRHHLAV 60

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGY 165
           +  W ++ + G IYKG YSGWYS+ DE YY  ++V     G+  + +    V+W+EEE Y
Sbjct: 61  QTFWNRLMENGHIYKGSYSGWYSVSDETYYAPNQVQSRNPGEMVSFETGQVVEWIEEENY 120

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDD 223
            F+LS +Q +L+ +   +P  ++  ++ + +       L DLS+SR T    WGI++P+D
Sbjct: 121 MFKLSDFQSRLIEWLTQNPTALVSSQKADIINQLQSKELPDLSISRPTDRLKWGIRVPND 180

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
           P  I+YVWIDALTNYLT TGY    D  K + WP ++HVIGKDI RFHAIYWPA L+ A 
Sbjct: 181 PNQIIYVWIDALTNYLTVTGYPWASDQIKNEKWPPNVHVIGKDITRFHAIYWPAMLMGAG 240

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI-ACGKDGFYD 342
           L LPK + +H     K EKISKS GNV+DP+E ++E GVD LRY+L+    +   D  + 
Sbjct: 241 LELPKSIIAHAHWTMKDEKISKSRGNVVDPVESLKEWGVDGLRYYLMAAPGSLWNDTDWA 300

Query: 343 KDGLKKRVNADLANGIGNLVSRSVS---------MILKDYDGMIPTPGAFTESDESILSV 393
            D + +    DLA  +GNL+SR  +          +        P      E  +++  +
Sbjct: 301 PDRVDEHYRKDLAGQLGNLLSRISNPKLWSRFPVGLKSGTGLFYPPQSFKLERSQALADL 360

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            S++  E+  +M +  I +AL  +  +++E +R      PW    T  + +   +Y+  E
Sbjct: 361 ISKLPDEVDRSMSSFEIPKALKSIFQVLTESNRLISEIAPWH-SSTGSEESHESIYLCAE 419

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            IR  AILLQ F+P+ +N+I + L ++ +NR +  L
Sbjct: 420 SIRFSAILLQPFMPEKSNEILNQLGISVKNRGWTDL 455


>gi|229529874|ref|ZP_04419264.1| methionyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333648|gb|EEN99134.1| methionyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 658

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 124/521 (23%), Positives = 212/521 (40%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T    + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   +      D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +DG +    A  E    + +  +     I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE----LYAEFAGAADRIAELFEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   ++ +   L         F  +F R 
Sbjct: 474 AERTEAFLN---QELTWEGVATPLT--DHAVTPFKALFNRI 509


>gi|189193705|ref|XP_001933191.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978755|gb|EDU45381.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 518

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 178/512 (34%), Positives = 262/512 (51%), Gaps = 31/512 (6%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ DV+ R+H L G   L  TGTDEHG K+ +AA  AG+  K F D+ +  F+++A   
Sbjct: 1   MVLTDVVKRWHLLKGEKALLCTGTDEHGLKVQRAAAKAGIDPKSFCDKGAEIFKELARKA 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +I+ D F+RTT+  H +  +  W  + +KG IY+  + GWYS+ DE +Y    V    D 
Sbjct: 61  EITNDHFVRTTDGEHKEAVQYAWFLLQEKGLIYEQKHEGWYSVTDECFYPKSGVQPYLDP 120

Query: 148 -----------QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
                             + V+W  EE Y FRLSA++DKLL +Y+++PE+I+P  R N+V
Sbjct: 121 PTGRKIMVYRLHTSIETGSEVEWSSEENYHFRLSAFRDKLLEFYKNNPEWIVPEARMNDV 180

Query: 197 ISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           +  V+SGL+DLS+SR      WGI++P D    +YVW+DAL NY T  GY   P   +  
Sbjct: 181 VQAVESGLEDLSISRPFDRLTWGIRVPGDDSQTIYVWLDALMNYATKAGYPWTPGREQEG 240

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            WPAD HVIGKDI+RFH IYWPAFL++  LPLPKK+ +H      G K+SKS G V+DP 
Sbjct: 241 GWPADCHVIGKDIVRFHCIYWPAFLMALGLPLPKKILTHAHWTLGGSKMSKSTGKVVDPF 300

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-------SVS 367
             I+  G D +R+++VRE     D  YD   +  + N  L   +GNL SR       SV 
Sbjct: 301 LAIDRFGSDVMRFYMVREGGIRDDASYDNARIIMQYNKFLRQHLGNLASRVVRGKKWSVR 360

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             ++   G                +  + +  E           RA+  +   +   + +
Sbjct: 361 GAIERIGGRSAEEWEEGPGSRFRNNSLATIASETDAAFDAYDPRRAVFGITEFIRSTNAF 420

Query: 428 FDAQKPWELK-----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           F    PW+           +    ++Y++ E +R   ILLQ ++P  AN++ D L V  +
Sbjct: 421 FTMSSPWDKILDFGPGEPGEDVDKIIYLSAEALRIAGILLQPYMPNKANQLLDQLGVDRD 480

Query: 483 NRCFQ--SLDQRLKPGFMLHKTFDP----IFP 508
            R F+   +D  L  G  L          +FP
Sbjct: 481 RRTFEYCKIDADLDYGTPLVDVGKAQEGVLFP 512


>gi|229505369|ref|ZP_04394879.1| methionyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510961|ref|ZP_04400440.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518082|ref|ZP_04407526.1| methionyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608388|ref|YP_002879036.1| methionyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|229344797|gb|EEO09771.1| methionyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229350926|gb|EEO15867.1| methionyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357592|gb|EEO22509.1| methionyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371043|gb|ACQ61466.1| methionyl-tRNA synthetase [Vibrio cholerae MJ-1236]
          Length = 658

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 124/521 (23%), Positives = 212/521 (40%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T    + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   +      D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +DG +    A  E    + +  +     I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE----LYAEFAGAADRIAELFEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   ++ +   L         F  +F R 
Sbjct: 474 AERTEAFLN---QELTWEGVATPLT--DHAVTPFKALFNRI 509


>gi|119715622|ref|YP_922587.1| methionyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|187647738|sp|A1SGG5|SYM_NOCSJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119536283|gb|ABL80900.1| methionyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 595

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 142/578 (24%), Positives = 241/578 (41%), Gaps = 82/578 (14%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +G+DEHG  I  AA  AG++ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILIAADEAGLSP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+N R   +    L ++YD + RTT + HH   + L+  + + G   +    G  S
Sbjct: 68  QELADRNHRIIAEDLASLGLTYDLYTRTTTRNHHAVVQELFLGVYENGYFVEQTTYGAIS 127

Query: 130 LRDE-----AYYNDDEVYKGADGQYYNAQHNPV--------------------QWMEEEG 164
                     Y        G DG   +   N                      +++E + 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPHDLIDPRSKINGETPEFIETQH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A  + L  + +      L           +   ++  +++R   DWGI +P D 
Sbjct: 188 FFLDLPALAEALGEWLDGREATGLWRPNVIRFSQNILKEIRPRAMTRD-IDWGIAVPLDG 246

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
               P   +YVW DA+  YL+ +        +  + + W  D      + +GKD + FH+
Sbjct: 247 WRENPTKRLYVWFDAVIGYLSASIEWARRLDEPDRWRDWWNDPDALSYYFMGKDNITFHS 306

Query: 273 IYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WPA LL                 L LP +V S  F+  +G K S S   VI   +++ 
Sbjct: 307 QIWPAELLAYSGKGAKGGTPRQYGELNLPTEVVSSEFLTMEGRKFSSSKRVVIYVRDLLS 366

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               DA RYF+       +D  +      +R N +L  G GNLV+R+ ++I K++   IP
Sbjct: 367 RYQPDAFRYFVAAAGPENQDSDFTWSEFVRRTNDELVAGWGNLVNRTANLIAKNFG-EIP 425

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G  T +D+++L   +     + + +      +A+ + +  V+EV++Y    +PW++ K
Sbjct: 426 KAGELTAADQALLDSVASAFGVVGDLIGRHRQKQAIGEAMRAVAEVNKYVSDTEPWKI-K 484

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------- 491
            +PDR  T+L+V  + +  L ++L  F+P  AN++   L  + E      L++       
Sbjct: 485 DDPDRLGTILHVVAQCVADLNLILSPFLPFAANEVDRALGGSGEIAPMPRLEEVDDLDGG 544

Query: 492 -------------------RLKPGFMLHKTFDPIFPRF 510
                               + PG  + K   PIF + 
Sbjct: 545 APYPIITGEYSGFPAWERRPIVPGTPVSKP-TPIFTKL 581


>gi|148361194|ref|YP_001252401.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|187647732|sp|A5II55|SYM_LEGPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148282967|gb|ABQ57055.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 670

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 135/543 (24%), Positives = 230/543 (42%), Gaps = 45/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 1   MTSERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++++   GDI 
Sbjct: 61  KAEQLGITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
           K     +Y    + +  D  V             G + +   A ++P             
Sbjct: 121 KKTIRQFYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGA 180

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               ME E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    
Sbjct: 181 SPVEMESEHYFFDLPRYEELLKDWTRKG---HLQTEVTNKLSEWFEAGLKQWDISRDAPY 237

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFW-----PADLHVIGKDILR 269
           +G  IP  P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ 
Sbjct: 238 FGFPIPGVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVY 297

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+ 
Sbjct: 298 FHALFWPAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYF 357

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + D    RVNADL   + N+ SR    I K +D  + +       ++
Sbjct: 358 AAKLNGRVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS----ELINQ 413

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
            + +      + + +   ++   RA+ Q++    +V++Y DA KPW L K          
Sbjct: 414 KLYNDLLSAREFVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHA 473

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +A    + L    E   + S+D+ L        TF P+
Sbjct: 474 ICTMGINLFRILITYLKPVLPMMAKASEEFLN--SEPLHWGSIDKPLL--NHRINTFKPL 529

Query: 507 FPR 509
             R
Sbjct: 530 MVR 532


>gi|229062703|ref|ZP_04200011.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228716572|gb|EEL68271.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 544

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 124/538 (23%), Positives = 222/538 (41%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKI 220
           E ++F L  +Q ++    E   +              ++K GL+D ++SR       I +
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQKGTWRDNAIQLTERYLKEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + +       G   + +        +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKNWAEETGKDDQEFWDKEAKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTINAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G +P        D  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGS----IDVELKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L          S+    +P   L    D   P+F R 
Sbjct: 479 ANFAQLLEPFLPFSSERVRNTL---------SSVKVNWEPQNTLPNRIDNVQPLFERI 527


>gi|224008408|ref|XP_002293163.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220971289|gb|EED89624.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 554

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 181/496 (36%), Positives = 272/496 (54%), Gaps = 22/496 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-----GLDVLFTTGTDEHGQ 56
              +  YI+TAI Y N   H+GHAYE    D +ARF RL      G    F TG DEHG+
Sbjct: 1   TNNKGFYITTAINYTNGPAHMGHAYEAATTDAIARFARLKCSPENGDTAYFVTGADEHGE 60

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
           KIAK A+  G       +     F+ +   + +S DD++RTT  RH  T + LW K +  
Sbjct: 61  KIAKTAEKEGKEPIDICNTYVTGFQCLNQRILVSNDDYVRTTSDRHKRTAQALWLKCAAN 120

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            DIY   YSGWY++++EA+  D E           A   P+Q ++E  YFF++S Y D+L
Sbjct: 121 DDIYLDQYSGWYNVKEEAFVTDSE--AELCNYIDEATGQPLQRVQEASYFFKMSNYHDRL 178

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIP--DDPQYIMYVWID 233
           + + ESHPEFI P   RN +++ +    L+DLS+SR TF  GI +P   +  ++MYVW D
Sbjct: 179 VEHIESHPEFICPESHRNAILARLNGDRLRDLSVSRTTFTHGIPVPEGFEKNHVMYVWFD 238

Query: 234 ALTNYLT------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           ALTNYL+            + D    K WPAD+H+IGKDIL FH + WP  L+SA +PLP
Sbjct: 239 ALTNYLSGVNALGVCNEDGSKDEELVKLWPADVHIIGKDILWFHTVIWPCILMSAGIPLP 298

Query: 288 KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           K VF+HGF+  K G+K+SKS+GNV+DP +++++  VD+ R++L +E   G +  + +D +
Sbjct: 299 KTVFAHGFVNDKEGKKMSKSVGNVVDPHDMLDKFDVDSFRWYLCKEAPYGGELSFSEDNM 358

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +   NADL + +GN+V R   +  K  DG+I    +   +    +     V +     M+
Sbjct: 359 RDMHNADLCDTLGNMVHRVTKLCGKYCDGVIMDVPSPETA----VLDFDAVRKAYVAKME 414

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAF 465
              +       I    +V+ Y   ++PW+LK     ++   V+  T+E +  +A LL  F
Sbjct: 415 VMALEGGANIAIQACRDVNGYLTKEEPWKLKGDEFTEKRQVVVRATLEAVYAVAHLLLPF 474

Query: 466 VPKLANKIFDILFVAD 481
           +PK A++I   +  A 
Sbjct: 475 IPKGASEIMKKMNTAP 490


>gi|229523177|ref|ZP_04412584.1| methionyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339540|gb|EEO04555.1| methionyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 658

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 124/521 (23%), Positives = 212/521 (40%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  ++  S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMGMTPEAMIEMVSEEHQRDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T    + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +  G     ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +  +  + LRY+   +      D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +DG +    A  E    + +  +     I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE----LYAEFAGAADRIAELFETREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   ++ +   L         F  +F R 
Sbjct: 474 AERTEAFLN---QELTWEGVATPLT--DHAVTPFKALFNRI 509


>gi|260772448|ref|ZP_05881364.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611587|gb|EEX36790.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 658

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 120/521 (23%), Positives = 212/521 (40%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGITPEEMIAAVSEEHQQDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T  + + +    ++ ++   G I     S  +    + +  D      
Sbjct: 61  AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKQMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + + GL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQTETANKMQEWFEGGLQQWDISRDAPYFGFEIPGETNKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +        ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCSKRNDLDFDEYWRKDSQTELYHFIGKDIVYFHSLFWPAMLEGSGFRKPTNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     ++ +  + LRY+   +      D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K +D  +      T ++  + +  +   + I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFISKRFDNQLSA----TFAEPELYAEFAAAAERIAELYETREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVIAKQEGQEQALQDICTVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    +   +  +   L         F  +F R 
Sbjct: 474 AERTEAFLN---QELTWDGIQTPLT--RHELTPFKALFNRI 509


>gi|296121388|ref|YP_003629166.1| methionyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013728|gb|ADG66967.1| methionyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 696

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 128/538 (23%), Positives = 213/538 (39%), Gaps = 45/538 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ +++A+ Y N   HIGH  E +  D+  RF +L G   ++    D HG  I   A+ 
Sbjct: 3   RQILVTSALPYANGHIHIGHLVEYLQTDIWVRFQKLVGNRCVYVCADDTHGTAIMIRARQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +    + +   +         I +D++  T    +   C  +W+ +     I +   
Sbjct: 63  EGRSELEVIGEMRESHLKDFTGFGIEFDNYGSTHSDENRALCAEIWQSLRQADLIVERNV 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQH------NPVQWMEEEGYFF 167
             +Y   +E +  D            E   G +     + +      NP+  +       
Sbjct: 123 ERFYDPVEETFLADRFIKGTCPKCGAEDQYGDNCDKCGSTYDATEVINPISTLSGATPVR 182

Query: 168 RLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSG------LKDLSLSRKTFDWGIKI 220
           R S      L        E+        E I+    G      L+D  +SR    +G +I
Sbjct: 183 RESLQLFVELEKLHGWLNEWTQTGGHLQEEIANYLQGHFLNDPLRDWDVSRPARYFGFEI 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           PD P    YVW DA   Y+ +T      +G K + W         H IGKDI  FH ++W
Sbjct: 243 PDSPGNYWYVWFDAPIGYIASTHQWCKANGEKLEDWWKSDRTEIHHFIGKDITYFHTLFW 302

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L +A L LPKKV  HGF+   GEK+SKS G  +     ++ +    LRY+   +++ 
Sbjct: 303 PAMLKTAGLNLPKKVHIHGFLRVNGEKMSKSKGTFVMASTYLKHLDPAYLRYYYASKLSS 362

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D   + D    R+N+DL   + NL SR+                A    D  + +  
Sbjct: 363 RVEDLDLNLDEFVARINSDLVGKVVNLASRTARFA------QPTGLSAQYPDDGGLFAEA 416

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTV 452
           +    +I E  +     +A+  ++ L  + ++Y +   PW LKK      +   V  V +
Sbjct: 417 AAEAGKIAELYEACEYAQAMRAIMVLAEKANKYVEDNAPWTLKKDPAQAGKLQDVCTVAL 476

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM-----LHKTFDP 505
            + RQLA+ L   +P+LA +   +L      + +      L    +     L K  DP
Sbjct: 477 NLFRQLAVYLAPVLPQLAEQTGRLLNAP--MKSWDEAQTPLVASPVNLFEHLMKRVDP 532


>gi|229014224|ref|ZP_04171345.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228747178|gb|EEL97060.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 544

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 124/538 (23%), Positives = 222/538 (41%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQDG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKI 220
           E ++F L  +Q ++    E   +              ++K GL+D ++SR       I +
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQKGTWRDNAIQLTERYLKEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + +       G   + +        +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKNWAEETGKDDQEFWDKEAETYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G +P        D  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGS----IDVELKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L          S+    +P   L    D   P+F R 
Sbjct: 479 ANFAQLLEPFLPFSSERVRNTL---------SSVKVNWEPQNTLPNRIDNVQPLFERI 527


>gi|270307759|ref|YP_003329817.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153651|gb|ACZ61489.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 553

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 137/541 (25%), Positives = 236/541 (43%), Gaps = 39/541 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+++I  A  Y N+Q H+GH A   + AD+ AR+HR  G +VL  +G+D HG  I   A+
Sbjct: 3   ERIFIGVAWPYANSQLHLGHVAGAYLPADIFARYHRTRGDEVLMVSGSDMHGTPITIRAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T     ++  R F      L IS+D +  T    H  T + ++  + +KG IYK  
Sbjct: 63  QEGITAAEVAERYHRLFMASWPKLGISWDCYTSTATANHARTAQEMFLSLYEKGYIYKDT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQ 158
               +      +  D  V                                      NP +
Sbjct: 123 VCQPFCPHCNRFLPDRYVEGTCPHCKYEGARGDQCDNCGKPLNAAELLNFRCKNCGNPPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E E +F +LSA++++LL + E+   +       N  + ++K GLKD +++R   DWG+
Sbjct: 183 FKETEHFFLKLSAFEEELLRWVENKTHWR--TNVLNFTLRYLKEGLKDRAITRD-LDWGV 239

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD---LHVIGKDILRF 270
            +P        +YVW +A+  YL+ +          G   K+W  D    + IGKD + F
Sbjct: 240 PLPLPGYEGKRLYVWFEAVIGYLSASIEWAVAKGQPGEWQKYWGGDTKSYYFIGKDNIPF 299

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+  + L LP  V S+ ++  + +K SKS    +   +V+    VD LRY L
Sbjct: 300 HTIIWPAMLMGKSGLNLPYDVPSNEYLTIEAQKFSKSRNKAVWVDDVLSRYSVDTLRYLL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +      +R N +L    GNL  R ++M+ +++   +P  G   E   +
Sbjct: 360 SANMPESSDMDFSWREFVRRNNDELVATYGNLAQRVLTMVCRNFGNKVPEYGELDERSLN 419

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           ++     +L E  + +       A+   +SL  E +RY D + PW+  K +   A+  LY
Sbjct: 420 LIEKTGAMLSETDKALHGCNFREAVKLAMSLAQEANRYLDEKAPWKEIKVDKAAAARSLY 479

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V +  +  L +    F+P+ ++++   L    E         ++          +P+F +
Sbjct: 480 VAMAALSGLRVAFYPFLPESSSRLSTYLGFGSEIEK-DGWVLKMPVVGQEMTPPEPLFKK 538

Query: 510 F 510
            
Sbjct: 539 L 539


>gi|11499048|ref|NP_070282.1| methionyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122911|sp|O28819|SYM_ARCFU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2649118|gb|AAB89796.1| methionyl-tRNA synthetase (metS) [Archaeoglobus fulgidus DSM 4304]
          Length = 658

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 124/508 (24%), Positives = 221/508 (43%), Gaps = 42/508 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++  + Y N + H+GH    + ADV  R+ R+ G +V+F  G+D HG  I   A+  G+
Sbjct: 3   LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K  VD    +F  + D L+I +D + RT    HH     + K++ +KG +Y       
Sbjct: 63  SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122

Query: 128 YSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQWMEE 162
           Y  + + +  D  V                                      +  ++  +
Sbjct: 123 YCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGEIKEPRCKICGSKAEFRSQ 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             YFF+L+ +QD L  Y     +        N   ++VK  L+D  ++R   +WG++ P 
Sbjct: 183 RHYFFKLTEFQDFLEDYL---SKLKGTENALNYARNWVK-NLRDWCITR-NLEWGVRFPG 237

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPA 277
           +P  ++YVW+DA   Y++ T       G   +    D     +H IG DI+  H I+WPA
Sbjct: 238 EPNLVVYVWVDAPIGYISFTEKACEEKGCDWRKIWIDGDAEIIHFIGLDIVYHHCIFWPA 297

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREIAC 335
            L  A+  LP  V + G +  +G+  SKS G V+   E  +   +  D LRY++V   + 
Sbjct: 298 MLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSH 357

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  +  +++VN ++   +GN + R +    K++  +          DE +L    
Sbjct: 358 QKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEVRMEG-----VDEEVLEKIR 412

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
              Q+I   ++      A    + L +  + YF   KPWEL KT+ + A   +   +++ 
Sbjct: 413 ETEQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTDKEAARRAVASCLQLA 472

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN 483
           + L I     +P+   ++   + +  EN
Sbjct: 473 KALIIFAYPVMPESMERMAKAIGLDLEN 500


>gi|196013568|ref|XP_002116645.1| hypothetical protein TRIADDRAFT_31114 [Trichoplax adhaerens]
 gi|190580921|gb|EDV21001.1| hypothetical protein TRIADDRAFT_31114 [Trichoplax adhaerens]
          Length = 761

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 116/540 (21%), Positives = 230/540 (42%), Gaps = 42/540 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + +++A+ Y N  PH+G+    ++ AD  AR+ R    ++L+  GTDE+G     
Sbjct: 123 EGKRNILLTSALPYVNNVPHLGNIVGCVLSADAFARYCRARNYNILYICGTDEYGTATET 182

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +   D+      ++    DIS+D F RTT K   +  + ++ ++ D+  + 
Sbjct: 183 KAVEEGVTPQQICDKYHALHAEVYKWFDISFDHFGRTTTKEQTEIAQDIFWRLQDRNYVT 242

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHN---------PVQWMEEE 163
           +      +    + +  D           +  A G   +             P   + + 
Sbjct: 243 EENVDQLFCENCQRFLADRFVEGTCPFCTFPDARGDQCDKCGKLINAIELKAPRCKVCKS 302

Query: 164 GYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               + S +    L   E                    RN   ++++ G+K   ++R   
Sbjct: 303 QPVIKSSKHLFLDLPKIEPQLHKYYGRPDSLTDWSPAARNITQTWLRDGVKSRCITRD-L 361

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P +   + + YVW DA   Y++ T         K    P ++   + + KD + 
Sbjct: 362 KWGTPVPLEGFTEKVFYVWYDAPIGYISITA-AYTDQWEKWWKNPQNVEMYNFMAKDNVP 420

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALR 326
           FH+I +PA LL+A  N  +  K+ +  ++ ++  K SKS G  +   +     + VD  R
Sbjct: 421 FHSIIFPACLLAADDNYTVVNKLSATEYLNYEDGKFSKSRGIGVFGNDAKATGIPVDIWR 480

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+      +D  +    L+ + N++L   +GN V+R++  +   ++G IP      E 
Sbjct: 481 FYLLYVRPETQDSSFSWSDLEAKNNSELLANLGNFVNRAMLFVSNFFNGEIPEMD-LIEE 539

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDR 443
           D+ +L+  +R ++    N++   I   +  ++S+    ++Y  +  PW+L K    +  R
Sbjct: 540 DKVLLAQITREIRTYNNNLERTRIRDGIRNILSVSRLGNQYMQSHTPWKLVKQSEADKKR 599

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKPGFMLHKT 502
           A TV+ V   +   L+ILLQ ++P  + +I     + D+ +         L  G  + K 
Sbjct: 600 AGTVVGVCANITCLLSILLQPYMPTTSKEILSQAKLVDDYSVITDKFVCLLPAGHRIGKP 659


>gi|56696287|ref|YP_166644.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|68565961|sp|Q5LTL1|SYM_SILPO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56678024|gb|AAV94690.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 572

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 121/555 (21%), Positives = 234/555 (42%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D F R++  ++H   +    K+++   I +   
Sbjct: 63  AGKPVAEYCAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D          G D    +   N                       +
Sbjct: 123 RQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLYLRQSALKDQLDAWIDSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +    Q        + YVW DA   Y+   G      G       ++W  D        
Sbjct: 242 PVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHGKSDAEWERWWRTDKGADDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA L+ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSKFGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA+   +E++++  +  L+    +M+   + ++  ++ ++ +  + Y  +  PW L 
Sbjct: 422 PEGGAYGPQEEALIAELTTRLRAYEGHMEAMEVRKSAQELRAIWAAGNEYLQSAAPWTLF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           KT+P +A+  + + + +IR  A+L   F+P  + ++ + +  +D+N      +    L P
Sbjct: 482 KTDPVQAAAQVRLGLNLIRLYAVLSAPFIPAASARMLEAMQTSDDNWPVDIATALNALAP 541

Query: 496 GFMLHKTFDPIFPRF 510
           G       + +F + 
Sbjct: 542 GHAFT-VPEVLFAKI 555


>gi|325916608|ref|ZP_08178871.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537162|gb|EGD08895.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 696

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 122/541 (22%), Positives = 207/541 (38%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLRGDKTWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    + +     + K+   G I +   
Sbjct: 63  AGVTPEAFIANIQASHERDFAAFGVTFDHYDSTNSPVNRELTEAFYSKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSPDQYGDNCEVCGATYAPTELKEPKSVISGATPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLREWLAGDVALPGVKAKLKEWLD-TEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL +   L    G        A       H IGKDI+ FH +
Sbjct: 242 IPGRPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDTHLVAGTQTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K ++G +    A    D++  
Sbjct: 362 SSGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFIGKRFEGKL----ADALPDQAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IR+  +      A+ Q ++L  E ++Y D  KPW + K +    +  +V  
Sbjct: 418 DRFVAALAPIRDAYERNDAASAIRQTMALADEANKYIDDTKPWVIAKQDGADAQLQSVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P+   +    L        ++ +++ L     + + +  +F R
Sbjct: 478 QGLNLFRILVAGLKPILPRTCAEAEAFLSAP--MTSWEDVERPLTA-HTI-QPYTALFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|291004605|ref|ZP_06562578.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 598

 Score =  309 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 154/579 (26%), Positives = 242/579 (41%), Gaps = 85/579 (14%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I+  A   G++T
Sbjct: 9   VAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPISVQADKEGLST 68

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RTT   H++  + ++  +   G I     +G  S
Sbjct: 69  RELADKYNRVITEDLQGLGLSYDLFTRTTTGNHYEVVQQIFLALHRNGYIIPKTTTGAIS 128

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYFFRLSAY 172
                     Y        G DG   +   N            PV  +  E   F  + +
Sbjct: 129 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPAELINPVSRINGEKPDFVETEH 188

Query: 173 QDKLLSYYESHPEFILPI---ERRN--EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-- 225
               LS +       L      R N  +    +   ++  ++SR   DWG+ IP D    
Sbjct: 189 LFLDLSAFTESLGKWLSTRTGWRSNVLKFTQNLVEDMRPRAISRD-LDWGVPIPLDGWRD 247

Query: 226 ---YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
                +YVW DA+  Y + +        D    K +  D      + +GKD + FHA  W
Sbjct: 248 QSMKRLYVWFDAVIGYFSASVEWARRTGDPDAWKQFWTDPSAQGYYFMGKDNITFHAQIW 307

Query: 276 PAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA L+                 L LP ++ S  F+   G K S S G VI   + + E G
Sbjct: 308 PALLMGHNGQGDKGGEVGPYGQLNLPDEIVSSEFLTMSGSKFSTSRGTVIYVRDFLREFG 367

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRYF+       +D  +  D   +RVN +LAN  GNLV+RSVSM  K+ +G +P P 
Sbjct: 368 PDTLRYFISVAGPENQDTDFTWDEFVRRVNFELANEWGNLVNRSVSMAAKN-NGAVPAPT 426

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           +   +DE + ++     + +  ++Q      A  + + +VS  ++Y   Q+PW+L K +P
Sbjct: 427 SPRAADEELKTLSRNAFETVGGHLQRSRFKAAAQEAMRVVSAANKYLSDQEPWKL-KEDP 485

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----------------------- 478
           DR   VL+  ++V+     LL  F+P  A K+ ++L                        
Sbjct: 486 DRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHELLGGTGVWSAQPELREVSDLDVPERE 545

Query: 479 -------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   A E   ++S +  ++ G  LHK   P+F + 
Sbjct: 546 YPVLMGDYAAEQASWESTE--IEVGRPLHKP-TPLFAKL 581


>gi|289641468|ref|ZP_06473631.1| methionyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508678|gb|EFD29614.1| methionyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 575

 Score =  309 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 139/543 (25%), Positives = 240/543 (44%), Gaps = 45/543 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + ++ A  Y N  PH+GH A   + AD+ AR+ RL G  VL  +G+D HG  I   A 
Sbjct: 35  RPVLVAVAWPYANGMPHLGHIAGAYLPADIFARYQRLAGNQVLMVSGSDTHGTPITVRAD 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+    V++    F  + D + IS+D F  T    H +  + ++ ++ + G I    
Sbjct: 95  IDGVSPAEIVNRYHPEFLRIWDDIGISFDLFTSTMTDNHREVAQDVFVRLREAGYIVPEE 154

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------Q 158
              ++  +   +  D  V            +G   +      +P               +
Sbjct: 155 TVQFFDPQAGRFLPDRYVVGTCPFCAYGEARGDQCENCGRTLDPDILLDPRSKLTGAVPE 214

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F RLSA  D LL++ E+   +       N  + FVK GL D +++R   DWG+
Sbjct: 215 KRATTHFFLRLSALADDLLAWLETRTGWR--RHVMNWSLQFVKDGLHDRAITRD-LDWGV 271

Query: 219 KIPDD---PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWP-----ADLHVIGKDIL 268
            +P D   P   +YVW +A+  YL+ +      + D    + W      A  + +GKD +
Sbjct: 272 PLPTDELGPGKRIYVWFEAVIGYLSASKEWAARSGDPDAWRQWWQNPDAASYYFVGKDNI 331

Query: 269 RFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            FH + WPA L+    L LP  V ++ ++   G K SKS G      E ++ +  DALRY
Sbjct: 332 PFHTVIWPAMLIGYGGLELPTDVPANQYVTFGGAKASKSAGIGRGVREYLDRLQPDALRY 391

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L   +    D       + +R+N +L    GNLV+R ++ I K +DG +P  G    + 
Sbjct: 392 ALATVLPEQNDTEITDADIIRRINDELIANWGNLVNRVMAQIGKRFDGRVPEAGELDGAH 451

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             ++      L  + E +    +  AL   + + +EV+ Y   ++PW+  KT+P RA   
Sbjct: 452 AKLIDSVDAGLVRVGELIGRVELRAALRAAMEISAEVNAYLYREEPWKTVKTDPARAGRT 511

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           L V+++ I  +   L  F+P  + ++ D L ++ +   ++   Q +  G  L  +   +F
Sbjct: 512 LAVSIQAISGITTALAPFLPFTSARLADTLGISLD--VWER--QPVPAGRALTWSG-ALF 566

Query: 508 PRF 510
            + 
Sbjct: 567 TKL 569


>gi|183222652|ref|YP_001840648.1| methionyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912685|ref|YP_001964240.1| methionyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226710908|sp|B0SHA8|SYM_LEPBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710909|sp|B0SQX5|SYM_LEPBP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167777361|gb|ABZ95662.1| Methionine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781074|gb|ABZ99372.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 681

 Score =  309 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 128/535 (23%), Positives = 230/535 (42%), Gaps = 42/535 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + +++A+ Y N   H+GH  E +  D+  RF +L G +  F    D HG  I  AA+ 
Sbjct: 3   KHILVTSALPYANGSIHLGHILEAVQTDIWVRFQKLIGNECYFFCADDTHGTPIMIAAKK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T +  +++  +          + YD++  T  + +      ++  +   G I     
Sbjct: 63  AGKTPESMIEEVQKEHYKDLTSFGVEYDNYYTTNSEENKKFSESIYLTLKKNGHIVARNI 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y   D+ +  D  +                                Y +        
Sbjct: 123 EQSYCEHDKMFLPDRFIKGTCPKCGAKDQYGDSCEVCGTSYSPKDLKDSYCSICGTTPVL 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E +  FF+L  +Q++L ++ E      L    + ++  +  SGL++  +SR    +G  
Sbjct: 183 RESKHLFFKLQDFQNQLKNWMEEGNR--LNEGAQKKLQEWFTSGLQEWDISRDGPYFGFA 240

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
           IP++     YVW+DA   Y+ ++      +    +FW       +H IGKDIL FH ++W
Sbjct: 241 IPEEENKYFYVWLDAPIGYMASSLNHLKDERKFNEFWKEGKGEIVHFIGKDILYFHGLFW 300

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REIA 334
           PA L+ +    P ++  HGF+   GEK+SKS G  I+     + + V+  R++L  R  +
Sbjct: 301 PAMLMGSGYKAPSQLNVHGFLTVNGEKMSKSRGTFINASTFAKYLDVEHFRFYLACRLGS 360

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D     D    RVN+DL   + NLVSR  + IL   D      G  +   +S++S  
Sbjct: 361 GMEDVDISFDDFVSRVNSDLIGNLVNLVSRVSTSILDKMDR---KLGILSTEGKSLVSEL 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
                EIRE   ++   + +  +  L  +V++Y +   PW L KT+ ++A  V+  ++  
Sbjct: 418 LSKETEIREAYVSRNYSKVMRDITGLGDKVNKYVNDYAPWNLIKTDVEKAREVVTTSLNC 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-----PGFMLHKTFD 504
            + L   L    PK+ + + D+  +   N  F +L + ++     P  ML K  +
Sbjct: 478 AKILFTYLAPVTPKIVHSLADLFQIP--NLSFLNLTETIENKVLGPYQMLSKRVE 530


>gi|255723323|ref|XP_002546595.1| methionyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240130726|gb|EER30289.1| methionyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 748

 Score =  309 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 108/550 (19%), Positives = 221/550 (40%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G     
Sbjct: 184 SDERNILITSALPYVNNVPHLGNIVGSVLSADIYSRYAKNRNYNALFVCGTDEYGTATET 243

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+   G + 
Sbjct: 244 KALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFMKLHKNGYLE 303

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +      Y    +++  D  V            +G          +P++ ++        
Sbjct: 304 EKTTEQLYCEEHKSFLADRFVEGTCPKCEYDDARGDQCDKCGNLLDPLELIKPRCKLDGA 363

Query: 170 SAY---------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           S                 +       +S  +       ++   S+ K GL+   ++R   
Sbjct: 364 SPIVKESTHIYLKLNELEEPLKEWIIDSSAKGAWSKNSKSITDSWTKRGLEPRCITRD-L 422

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW--PADL---HVIGK 265
            WG  + +    + ++YVW DA   Y++     + D       K+W  P ++     +GK
Sbjct: 423 IWGTPVPLKGYEEKVLYVWFDATIGYISITANYFKDGNVDDYLKWWKNPENVDLYQFMGK 482

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 483 DNVPFHTVVFPASQIGTGDNWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNAKETGVSP 542

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N +L   +GN V+R V  ++  Y+G++P    
Sbjct: 543 SVWRYYLASNRPENQDSHFSWDEFVAKNNNELLANLGNYVNRIVKFLIAKYNGVVPKYDV 602

Query: 383 FTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D +      + +L    ENM++  + + L   +++ S  +++    K    L    
Sbjct: 603 SNIPDYASFEKDINTLLSSYIENMESVNLRKGLELAMAISSRGNQFLQDNKLDNSLYTNQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P+++  V+ V + ++  ++ ++  F+P+   +I +IL     +      +  L PG  + 
Sbjct: 663 PNKSDAVVAVAINLVYLISAIIYPFMPETTKQINEILNAPSLSIT-DKFEFVLLPGHCIG 721

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 722 KA-QYLFTRI 730


>gi|170103074|ref|XP_001882752.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642123|gb|EDR06380.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 588

 Score =  309 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 175/551 (31%), Positives = 260/551 (47%), Gaps = 54/551 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG--LDVLFTTGTDEHGQKIAKA 61
           ++  Y++T I YPNA PHIGH Y +++ D+ AR+ R+      V F  GTDEHG KI +A
Sbjct: 38  KKPYYLTTPIFYPNAVPHIGHLYTLVLGDIFARYQRILDPTRPVHFLAGTDEHGLKIQQA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AGV  K F D  S  FR++AD   ISY  ++RTT+++H      +W  +  KG IYK
Sbjct: 98  AEKAGVEPKSFCDSLSGKFRELADRARISYTVYMRTTQEQHKKAVEHVWLTLDRKGFIYK 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYK-----------GADGQYYNAQHNPVQWMEEEGYFFRLS 170
           G Y GWYS+ DE +Y D +V                        +PV+W  E+ Y FRLS
Sbjct: 158 GQYEGWYSITDECFYADAQVMPATLPSSSSSRGEKPAMISIETSSPVEWTTEQNYMFRLS 217

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISF--------------VKSGLKDLSLSRK--TF 214
           A+++ L  +Y      + P    + V+                 +  L+D+S+SR     
Sbjct: 218 AFREALEEHYREQKTEVHPPPYHSAVLKMLGSASSSTSSSADAPEPILQDISISRPRSRL 277

Query: 215 DWGIKIPDDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            WG+ +P DP  + MYVW DAL  YL+  GY  +  G  +  WPADL +IGKDILRFHA+
Sbjct: 278 SWGVPVPTDPLNHTMYVWFDALLVYLSGVGYPWSHLG-PSIPWPADLQIIGKDILRFHAL 336

Query: 274 YWPAFLL---------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           Y PA L+                  LPL  K+ SH       +K+SKSLGNV DP+  + 
Sbjct: 337 YLPAILMALSSPSPPSSSPSPPPQKLPLSSKILSHAHWTVSRQKMSKSLGNVADPLAAMS 396

Query: 319 EVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             GVD +RY+L         D  +  + L  + + +L + +GN   R  S  +       
Sbjct: 397 TYGVDIVRYYLAIVGGRFRDDVDWSPEQL-TKHSKELQSLLGNYFLRVTSERISAVAQPA 455

Query: 378 PTPGAFTESD-----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               A    +      S+L     +  ++++ + N  +  AL ++I+L+   ++      
Sbjct: 456 TESNASETIEEPNPNRSLLLSARALPTQVQKALDNLEVGEALEEIIALLRLANKTVTTIA 515

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           PW      P        V +E +R   I LQ F+P +A K+ D L V    R + S    
Sbjct: 516 PWS-ASCPPTNVYVTQLVALETLRITGICLQPFIPDVAEKLLDGLGVPAGERDWASAQSE 574

Query: 493 LKPGFMLHKTF 503
           +     + K  
Sbjct: 575 VDWRGRVVKGV 585


>gi|62261489|gb|AAX77993.1| unknown protein [synthetic construct]
          Length = 709

 Score =  309 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 121/544 (22%), Positives = 225/544 (41%), Gaps = 42/544 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I  
Sbjct: 24  MLEMRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIML 83

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+T +  V + S          +I++D++  T    + +    ++ K+++K  I 
Sbjct: 84  KAKSLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 143

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           K   +  Y    + +  D            E   G   +   A ++P + +         
Sbjct: 144 KKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQ 203

Query: 170 SAYQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S  Q     ++                  +L  E  N++  + + GL+   +SR    +G
Sbjct: 204 SPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFG 263

Query: 218 IKIP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILR 269
             IP  + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ 
Sbjct: 264 FAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIY 323

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+ 
Sbjct: 324 FHTLFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYF 383

Query: 330 V-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             R  +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D 
Sbjct: 384 ASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDP 439

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRAST 446
            + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   
Sbjct: 440 ELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQ 499

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    + + + L + L+  +P +  +    L +  +   +    + L     + K F P+
Sbjct: 500 VCSQGINMFKVLIVYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPL 555

Query: 507 FPRF 510
             R 
Sbjct: 556 ATRI 559


>gi|261402933|ref|YP_003247157.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369926|gb|ACX72675.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 655

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 136/532 (25%), Positives = 247/532 (46%), Gaps = 45/532 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I+TA+AY N   H+GHA    I AD++ ++ +L G DV+   GTD HG  I   A+ 
Sbjct: 2   RYLITTALAYTNGPLHLGHARSTYIPADIMYKYLKLRGEDVIHVGGTDNHGVPITLTAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  V++     ++  D+L++ +D F +T  + H +T +  + K+ + G IY+   
Sbjct: 62  EGKSPEEIVEKYHNEIKEDLDLLNVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWME---------------- 161
             +Y  + + +  D  V            G +       ++  E                
Sbjct: 122 EQFYCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKNPYCVICKGTPEIR 181

Query: 162 -EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             + YFF+LSA +++L  Y ++  E   P   +N  ++++K  L D  +SR    WG+ I
Sbjct: 182 KTKHYFFKLSALKNELEEYIKNAEEM--PEHVKNMALNWIKE-LHDWDISRD-ISWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFL 279
           P     +MYVW++A   Y++ +  L +            + H IGKDI   HA++WP  L
Sbjct: 238 PGT-NQVMYVWLEAPIGYISFSKMLGDIWKKYWLEKGTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 L-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +      LP  V S G++  +G K+S S   V+   + ++    D LRY+L+      KD
Sbjct: 297 IAHKGFNLPAAVVSGGYLTLEGRKMSTSKKWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  +         E D+++L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDENRLKEEDKALLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ + +N+++     AL  ++ L  + + YF   +PW +K  + +R   +LY   + ++ 
Sbjct: 417 IKAVDKNIRSFKFRDALVNILHLAIDGNAYFQKMEPWAVK--DEERLKEILYTCCKTVKT 474

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           L  LL  ++PK A  + +++         + LD  L+ G  L K    IF +
Sbjct: 475 LIYLLYPYMPKKALALLELMN--------EELDLNLR-GNEL-KKPKIIFKK 516


>gi|225352686|ref|ZP_03743709.1| hypothetical protein BIFPSEUDO_04314 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156651|gb|EEG70045.1| hypothetical protein BIFPSEUDO_04314 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 620

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 145/544 (26%), Positives = 234/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+K+    G IYKG   
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRAWWNDPETPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L  N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K++  +  
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                 T+ D ++LS        +   ++N     AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDESEMTDEDRALLSETKAAFDTVGSLIENHRQKNALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+V  + +     LL  F+P  A K+++ L           L++     K
Sbjct: 483 KDNPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGFM
Sbjct: 543 PGFM 546


>gi|89069900|ref|ZP_01157234.1| methionyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044576|gb|EAR50695.1| methionyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 572

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 118/553 (21%), Positives = 224/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLFARYQRARGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +  +   D+A+   +S+D F R++  ++H   +     ++++G I +   
Sbjct: 63  AGKPVAEYCAEMWQVQADLAEGFGLSFDHFGRSSSPQNHALTQHFAGVLAEQGLIEEVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
           +  YS  D  +  D  +            +G        Q +PV               +
Sbjct: 123 TQMYSPADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLIDAYSTISGSRELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  + R S  +D+L ++ ++  ++ +              GL+D  ++R   DWG+
Sbjct: 183 MRATKHLYLRQSVLKDELAAWIDTKTDWPVLTTSIARKWLNDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+               A++W  D          
Sbjct: 242 PVKRGSEDWPGMEGKVFYVWFDAPIEYIACAQEWVEAGKGDDWARWWRTDRGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATILGSREPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPESADAEFTWENFQASVNKDLADVLGNFVSRVTKFCNAKFGPQVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            GA    + +++      ++    +M    + +A A++ ++    + Y     PW + KT
Sbjct: 422 AGAHGPDEAALIEELEGRVRAYERHMDAIEVRKAAAELRAIWVTGNEYLQKAAPWTVIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +  RA   + + + +IR  AIL   FVP  + ++ + L V+D             L  G 
Sbjct: 482 DEARAKAQIALGLNLIRLYAILSAPFVPNASARMLEALGVSDAAWPGDVAGALTALPAGH 541

Query: 498 MLHKTFDPIFPRF 510
              +  + +F + 
Sbjct: 542 GF-EVPEVLFAKI 553


>gi|163858414|ref|YP_001632712.1| methionyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163262142|emb|CAP44444.1| metG [Bordetella petrii]
          Length = 691

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 133/554 (24%), Positives = 229/554 (41%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  V + +       D   I +D +  T    +    + +++ +     I     
Sbjct: 63  EGISPQELVARYAAERPRYLDGFHIRFDHWHSTDSAENVALSQDIYRALQAANLIETRAI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P   +             
Sbjct: 123 EQFYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLINPYSALTGATPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSL 209
              E +FF+LS      +     +   +     L  E + +   +      ++ L D  +
Sbjct: 183 KSSEHFFFKLSDPRCVEFLQHWTTGVNAAGNKHLQPEVQAKTREWLGGDDGQAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNY------LTTTGYLDNPDGSKAKFWPADLHVI 263
           SR    +GI+IPD P    YVW+DA   Y            LD       +     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAKQGLDFDALLDPQGSTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P  +  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYLDIGMNA 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY++  +  A  +D  ++ D    RVN+DL     N+ SR+ + I K +DG +   G
Sbjct: 363 EWLRYYIAAKLNARVEDIDFNPDDFVARVNSDLVGKYVNIASRAANFITKHFDGALAYEG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                  ++ +  +   + IR   + +  +RA+ ++++    +++ FD  +PW L K   
Sbjct: 423 DT----AALSAEFAARAESIRAAFEAREYNRAIREIMAYADGINQAFDTAQPWVLAKGIG 478

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQ 491
                   R   +   ++   + L+++L   +P LAN++   LF A +   +    +L +
Sbjct: 479 AADAAQKARLQDICSRSLAGFKALSVMLAPVLPALANRVARELFGAAQPFTWADAAALPE 538

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  DP
Sbjct: 539 RVAPFKHLMQRVDP 552


>gi|167626594|ref|YP_001677094.1| methionyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596595|gb|ABZ86593.1| Methionine--tRNA ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 673

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 127/542 (23%), Positives = 233/542 (42%), Gaps = 46/542 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G + +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNECIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  V++ S N +      +I +D++  T    + +    ++ K++ +  I K   
Sbjct: 62  LGIAPEELVEKYSNNHQKDFLSFEIEFDNYHSTHSLINKEIVEDIYGKLNAQKLISKKEI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEE----------- 162
           +  Y    + +  D            E   G   +   A ++P + +             
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPKSVVSGKAPIQ 181

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L + +  +  + ES+    L  E  N++  + + GL+   +SR    +G  
Sbjct: 182 KNSEHFFFDLPSLEKNIKDWIESNKL--LQPEVANKLAEWFEQGLQSWDISRDAPYFGFA 239

Query: 220 IP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
           IP  D Q   YVW+DA   Y+ +   Y D  +    +FW  +       H IGKDI+ FH
Sbjct: 240 IPGTDEQKFFYVWLDAPMGYIASFRDYCDKNNVDFNEFWGDNSCESELYHFIGKDIIYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV- 330
           A++WPA L S     P  VF++GF+   G+K++KS G  I     ++ +    LRY+   
Sbjct: 300 ALFWPAILSSTGYKTPTSVFANGFLTVNGKKMAKSRGTFIQARTYLDNLEPSYLRYYFAS 359

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           R  +   D   + +    + N+D+   + N+ SR    I K +D  +    A    D+ +
Sbjct: 360 RLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----ANEVLDKEL 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
               ++  + I E  + +    A+  +++L  + +++ D  KPW+L K      +   V 
Sbjct: 416 EKEFAKSHRAITEAFEKREFAHAVRLIMTLADKANQFIDHHKPWQLAKEEGQEQKVHQVC 475

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + + + L   L+  VP +       L +  E   +      LK    ++K F P+  
Sbjct: 476 SQGINMFKVLVAYLKPIVPSIVKNAEIFLNI--ELSKWSDAPVFLKS-HKINK-FKPLAT 531

Query: 509 RF 510
           R 
Sbjct: 532 RI 533


>gi|325971031|ref|YP_004247222.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026269|gb|ADY13028.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 741

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 118/529 (22%), Positives = 218/529 (41%), Gaps = 47/529 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +K  +++A+ Y N  PH+G+  +++ ADV ARF R  G + L+  GTDE+G     
Sbjct: 1   MSPMKKRLVTSALPYVNNIPHLGNLTQVLSADVFARFCRSKGYETLYICGTDEYGTATET 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GV+ +   D+     RD+    +I++D F RT+        + ++ K+   G I 
Sbjct: 61  RALKEGVSPRELCDRYHAIHRDIYAWFNIAFDYFGRTSTPEQTKIVQDIFTKVDAAGYIS 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +      Y    + +  D  V            +G          +P++ +         
Sbjct: 121 EHELEQLYCPSCQRFLADRFVEGTCPHCHSEGARGDQCDSCQTLLDPIELINPRCGVCGT 180

Query: 170 SAYQDKLLSYYE-----------SHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTF 214
                K    Y               +        N  I     +++ GLK+  ++R   
Sbjct: 181 RPVPKKTKHLYIDLPKALPLLEGWMEKASKEGFWANNAIQVTKSWIRDGLKERCITRD-L 239

Query: 215 DWGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKD 266
            WGI +P       + YVW DA   Y++    +        K W  D         IGKD
Sbjct: 240 KWGIPVPKPGYEDKVFYVWFDAPIGYVS----ISANATKDWKKWWGDPENTELFQFIGKD 295

Query: 267 ILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FH + +P+  L++         + S  ++ ++G K SKSLG  I   +V +  +  D
Sbjct: 296 NIPFHTVIFPSCQLASGETWTMLHHMSSTEYLNYEGGKFSKSLGIGIFGNDVQDTGIPAD 355

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R+++        D  +     +++VN +L   + NLV+R+++ I + Y        + 
Sbjct: 356 VWRFYMFYNRPEKSDVTFTWADFQEKVNGELIGNLSNLVNRTLTFIQRFYPDASLLKASL 415

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
              DE +         EI   ++       L Q+++L S  ++ F   +PW+LK ++P +
Sbjct: 416 ---DEELWKQVIAKEAEIDALLERAEEREGLRQILALSSIGNKAFQDGEPWKLKNSDPQK 472

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           A ++L   + +IR L I+++ ++P  + +I   L    EN  +  L + 
Sbjct: 473 AMSLLKTLIYLIRDLGIMVEPYMPTTSTRILAFLG--SENARWTDLGKA 519


>gi|238882844|gb|EEQ46482.1| methionyl-tRNA synthetase [Candida albicans WO-1]
          Length = 748

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 114/550 (20%), Positives = 226/550 (41%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G     
Sbjct: 184 SDERNILITSALPYVNNVPHLGNIIGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATET 243

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+ +KG + 
Sbjct: 244 KALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTSLQTEIAQDIFLKLHNKGYLE 303

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      Y    +++  D           Y+ A G   +   N +  +E      ++   
Sbjct: 304 EKTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGN 363

Query: 173 ------------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                             +       +S  +       +N   S++K GL+   ++R   
Sbjct: 364 TPVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSRNSKNITDSWIKRGLEPRCITRD-L 422

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW--PADL---HVIGK 265
            WG  + +      ++YVW DA   Y  +T   + D+      K+W  P ++     +GK
Sbjct: 423 IWGTPVPLKGYDNKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWKNPENVDLYQFMGK 482

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 483 DNVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNAKETGVSP 542

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N++L   +GN V+R V  ++  Y+G+IP    
Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D +   +  + +L    +NM+N  + + L   +++ S  +++    K    L    
Sbjct: 603 KNIPDYDKFETDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P ++  V+ V + ++  ++ ++  F+P+   KI  IL     +   +  +  L PG  + 
Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTVKIDQILNAPALSITNK-FELVLLPGHCIG 721

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 722 KA-QYLFTRI 730


>gi|212716519|ref|ZP_03324647.1| hypothetical protein BIFCAT_01445 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660506|gb|EEB21081.1| hypothetical protein BIFCAT_01445 [Bifidobacterium catenulatum DSM
           16992]
          Length = 620

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 145/544 (26%), Positives = 234/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+K+    G IYKG   
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELLNPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRAWWNDPETPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L  N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K++  +  
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                 T+ D ++LS        +   ++N     AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDENEMTDEDRALLSETKAAFNTVGSLIENHRQKNALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+V  + +     LL  F+P  A K+++ L           L++     K
Sbjct: 483 KDNPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGFM
Sbjct: 543 PGFM 546


>gi|229020277|ref|ZP_04177046.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229026501|ref|ZP_04182856.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228734809|gb|EEL85449.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228741030|gb|EEL91259.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 544

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 134/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVKEVADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGLCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +  +F                 R N +     ++K GL+D ++SR     G+ IP
Sbjct: 183 EHFYFALHKFQQQIKAAVEIAKQKGTWRDNAIQLTERYLKEGLQDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + +  + +  + +  +FW  D    +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETEKADQEFWDRDAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K YDG++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPKGIINVE----LKEKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++  P      +Y  V +
Sbjct: 418 EGLYKNVGELIEQAKFKVALETIFDAVRFANKYFDEKQPWKQREDAPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + K+ +IL +   N          KP   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSEKVRNILSIVKRNW---------KPQNTLPNRIDSVQPLFERI 527


>gi|163743016|ref|ZP_02150399.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383699|gb|EDQ08085.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 575

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 114/560 (20%), Positives = 228/560 (40%), Gaps = 52/560 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG    
Sbjct: 1   MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +       +A    +S+D F R++  ++H   +    K++++G I
Sbjct: 61  LAAAKAGKPVADYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEQGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV----------- 157
            +      +S  D  +  D  +            +G   +    Q +P            
Sbjct: 121 REVTEKQVFSHADGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLIDPRSAISG 180

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               +  E +  +   S  +D+L  +  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDDWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKIPDD-------PQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD--- 259
            DWG+ +             + YVW DA   Y+  +    +     D    ++W  D   
Sbjct: 240 LDWGVPVKKGDADWPGMEGKVFYVWFDAPIEYIAASREWADANGKTDADWQRWWRTDKGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  + 
Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           Y   +P    + E++++++   S  +     +M    + ++  ++ ++    + Y  +  
Sbjct: 420 YGEAVPAGNDYGEAEQALIDEISTRVTAYEGHMAAMDVRKSAQELRAIWVAGNEYLQSVA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLD 490
           PW + KT+PD+A+  + + + +IR  A+L   F+P    ++   L   D +      +  
Sbjct: 480 PWSVFKTDPDQAAAQVRLGLNLIRLYAVLSAPFIPDATERLLAALQTEDRSWPDDVAAAL 539

Query: 491 QRLKPGFMLHKTFDPIFPRF 510
             L  G       + +F + 
Sbjct: 540 SALPAGHAFT-VPEVLFAKI 558


>gi|163738597|ref|ZP_02146011.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161387925|gb|EDQ12280.1| methionyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 575

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 115/560 (20%), Positives = 228/560 (40%), Gaps = 52/560 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG    
Sbjct: 1   MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +       +A    +S+D F R++  ++H   +    K++++G I
Sbjct: 61  LAAAKAGKPVADYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEQGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV----------- 157
            +      YS  D  +  D  +            +G   +    Q +P            
Sbjct: 121 REVTEQQVYSHTDGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLIDPRSAISG 180

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               +  E +  +   S  +D+L  +  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDDWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKIPDD-------PQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD--- 259
            DWG+ +             + YVW DA   Y+  +    +     D    ++W  D   
Sbjct: 240 LDWGVPVKKGDADWPGMEGKVFYVWFDAPIEYIAASREWADANGKTDADWQRWWRTDMGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  + 
Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           Y   +P    + E++++++   S  +     +M    + ++  ++ ++    + Y  +  
Sbjct: 420 YGEAVPAGNDYGEAEQALIDEISTRVTAYEGHMAAMDVRKSAQELRAIWVAGNEYLQSVA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLD 490
           PW + KT+PD+A+  + + + +IR  A+L   F+P    ++   L   D +      +  
Sbjct: 480 PWSVFKTDPDQAAAQVRLGLNLIRLYAVLSAPFIPDATERLLAALQTEDRSWPDDVAAAL 539

Query: 491 QRLKPGFMLHKTFDPIFPRF 510
             L  G       + +F + 
Sbjct: 540 SALPAGHAFT-VPEVLFAKI 558


>gi|282889857|ref|ZP_06298396.1| hypothetical protein pah_c004o273 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500431|gb|EFB42711.1| hypothetical protein pah_c004o273 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 680

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 127/548 (23%), Positives = 225/548 (41%), Gaps = 48/548 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ +++A+ Y N   H GH A   +  D  +RF RL   +VL+  G+DE+G  I  +A+
Sbjct: 3   KKILVTSALPYANGPLHFGHIAGAYLPGDCYSRFQRLQKNNVLYVCGSDEYGVAITMSAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T K  VD       ++   L+ S+D + RTT K H +T    +  +   G I +  
Sbjct: 63  LAGRTPKEHVDIFHEVNLNLFKKLNFSFDHYSRTTWKGHAETVHQYFLDLLANGYIEERT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNA-------------------------QHNPVQ 158
               YS  D+ +  D  V        Y                              P+ 
Sbjct: 123 TEQLYSEVDQRFLADRYVVGTCPRCGYENARGDECTKCGASYEATDLKNPRSKLTDAPLI 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + +F  L  ++++LL + +S              I      L   +++R +  WGI
Sbjct: 183 LKPTKHWFLVLDLFKERLLEWIDSKNWKPNVSNFAKGYIKD----LHARAITRDS-TWGI 237

Query: 219 KIP--DDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVIGKDILR 269
            IP  D    ++YVW DA   Y++ T             K +  D     ++ IGKD + 
Sbjct: 238 PIPLPDTEGKVLYVWFDAPIGYISATKEWAELRGSPESWKDYWCDQSTQLVNFIGKDNIP 297

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FHA  +PA  +  N P     ++ ++ F   +G + SKS G  ID  +  +    D +RY
Sbjct: 298 FHAAIFPAMTMGQNQPYKLVDELPANEFYNLEGRQFSKSDGWYIDLDDFFKRYTPDQIRY 357

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            +        D  +     ++R N +L    GNLV+R +    K  +G +P        D
Sbjct: 358 AIAANAPETSDSEFTWKDFQQRCNIELLGKYGNLVNRVLVFAHKQCEGRVPQKKDLQPID 417

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--S 445
              L    R+++E  ++     + RA   V+ L    + YFDA++PW+  +    RA   
Sbjct: 418 LGFLENMQRLVEEAAQSYDTFKLRRASQIVMELAQLGNVYFDAKRPWQDAREEATRASME 477

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT--- 502
           T +   ++ ++ LA++    +P+ A +I+ +L  +   +  Q  +   +    + +    
Sbjct: 478 TTIACCLDCLKLLALISFPIIPESAEQIWKMLGYSSPLKT-QDWNTVAQTPIPVSQPLLQ 536

Query: 503 FDPIFPRF 510
              +F + 
Sbjct: 537 PKILFQKI 544


>gi|254410100|ref|ZP_05023880.1| methionyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196183136|gb|EDX78120.1| methionyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 576

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 128/545 (23%), Positives = 229/545 (42%), Gaps = 43/545 (7%)

Query: 7   LYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             I++A+ Y N   H+G+    M+ ADV +RF R +G  VLF   TDEHG     AA  A
Sbjct: 19  YLITSALPYINGIKHLGNLVGSMLPADVYSRFLRQEGESVLFICATDEHGTPAELAALEA 78

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+    +  +      ++     +S+D F RT+   HH+  +  ++++ + G + +    
Sbjct: 79  GLDVTTYCQKQHERQAEIYRGFGLSFDYFGRTSSPDHHELTQHFYQRLDENGFMEEREIR 138

Query: 126 GWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             YS  D  +  D  +            +G   +   +  +P   +E        +  + 
Sbjct: 139 QVYSHEDNRFLPDRYIVGTCPYCGYDRARGDQCENCTSVLDPTDLIEPRSAVSGSTNLEV 198

Query: 175 KLLSYY-------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   +                  +       R+  + ++  GL+D  ++R    WG+ +P
Sbjct: 199 RTTKHLFLKLTTLSDEVRSWVDNQQEWTTLTRSIALKWLNEGLQDRCITRD-LSWGVPVP 257

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD------LHVIGKDILRFH 271
                  + YVW DA   Y++ T    N        K W  D      +  + KD L FH
Sbjct: 258 RPGFEGKVFYVWFDAPIGYISATKGWANQQAEADNWKSWWYDSQDIRHVQFMAKDNLPFH 317

Query: 272 AIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            I WPA +L    P      +    ++ + G K S S    I   + +E V  D  RY L
Sbjct: 318 TIMWPAMILGTREPWTMADDIKGFNWLTYYGGKFSTSSKRGIFSDQALEIVPADYWRYAL 377

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +       D  +  +  + ++N DLA+ +GN V+R +      + G+IP  G   E+++ 
Sbjct: 378 IAMSPESADSAFTWELFQIKINKDLADNLGNFVNRILKFANSRFKGVIPEGGTPGEAEQR 437

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +   C  ++ ++   +QN    +A   + +L +  ++Y D + PW L K N + A+ V+ 
Sbjct: 438 LQESCESLITKLSNCLQNLEFRKAAETLCALWTVGNQYIDERAPWALFKQNKEEAALVIR 497

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH----KTFDP 505
            ++ +IR  AI    F+P  A KIFD L +++  R  Q L Q +    ++         P
Sbjct: 498 TSINLIRLYAIASNPFIPFTAEKIFDALQLSETERT-QRLTQAVDFNALVAGRSFAVPPP 556

Query: 506 IFPRF 510
           +F + 
Sbjct: 557 LFRKL 561


>gi|68467731|ref|XP_722024.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
 gi|68468050|ref|XP_721864.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
 gi|46443806|gb|EAL03085.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
 gi|46443971|gb|EAL03249.1| potential cytoplasmic methionyl tRNA synthetase [Candida albicans
           SC5314]
          Length = 748

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 114/550 (20%), Positives = 226/550 (41%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +   + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G     
Sbjct: 184 SDERNILITSALPYVNNVPHLGNIIGSVLSADIYSRYAKNRNYNTLFICGTDEYGTATET 243

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+     +++ D  DI +D F RTT     +  + ++ K+ +KG + 
Sbjct: 244 KALEEKVTPQQLCDKYHAIHKEVYDWFDIGFDYFGRTTTSLQTEIAQDIFLKLHNKGYLE 303

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      Y    +++  D           Y+ A G   +   N +  +E      ++   
Sbjct: 304 EKTTEQLYCEHHKSFLADRFVEGTCPKCDYEDARGDQCDKCGNLLDPLELINPRCKVDGN 363

Query: 173 ------------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                             +       +S  +       +N   S++K GL+   ++R   
Sbjct: 364 TPVVKESTHIYLKLNDLEEPLKEWVLDSSAKGAWSRNSKNITDSWIKRGLEPRCITRD-L 422

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW--PADL---HVIGK 265
            WG  + +      ++YVW DA   Y  +T   + D+      K+W  P ++     +GK
Sbjct: 423 IWGTPVPLKGYDNKVLYVWFDATIGYVSITANYFKDSNTDDYLKWWKNPENVDLYQFMGK 482

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  V  
Sbjct: 483 DNVPFHTVVFPASQIGTGDKWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNNAKETGVSP 542

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L       +D  +  D    + N++L   +GN V+R V  ++  Y+G+IP    
Sbjct: 543 SVWRYYLASNRPETQDAHFSWDEFVAKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDT 602

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D +   +  + +L    +NM+N  + + L   +++ S  +++    K    L    
Sbjct: 603 KNIPDYDKFENDINSLLASYIDNMENVNLRKGLELAMAISSRGNQFLQDNKLDNSLYANQ 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P ++  V+ V + ++  ++ ++  F+P+   KI  IL     +   +  +  L PG  + 
Sbjct: 663 PAKSDAVVAVAINLVYLVSAIIYPFMPETTVKIDQILNAPALSITNK-FELVLLPGHCIG 721

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 722 KA-QYLFTRI 730


>gi|307204861|gb|EFN83419.1| Methionyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 831

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 121/547 (22%), Positives = 223/547 (40%), Gaps = 41/547 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+  GTDE+G     
Sbjct: 253 KGERNVLITSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYICGTDEYGTATEA 312

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+     I +D F RTT     +  +  + KI  +G I 
Sbjct: 313 KALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQSFFLKIKSQGYIL 372

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY-----------YNAQHNPVQWMEEEG----- 164
                  +    + +  D  V     G                  N V+ +E        
Sbjct: 373 NETVEQLHCELCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLMNAVELVEPRCKICNT 432

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                    FF      +  L  +            +    S+++ GLK   ++R    W
Sbjct: 433 KPVVKNSVQFFLDLPKIEDRLKQWSDTVSKGWSSVAKVVSKSWLRDGLKPRCITRD-LKW 491

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFH 271
           GI +P +     + YVW DA   Y++ T           K     +     + KD + FH
Sbjct: 492 GIPVPVNGFENKVFYVWFDAPFGYISITKRYTKEYEKWWKPQDTKVDLCQFMAKDNVPFH 551

Query: 272 AIYWPAFLLSANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           AI +PA LL+AN    L K + +  ++ ++ +K SKS    +   +  +  +  D  R++
Sbjct: 552 AIMFPACLLAANQNNTLIKYLMATEYLNYEDKKFSKSRSVGVFGTDARDTGIPADVWRFY 611

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L       +D  ++   L  + N++L N +GN V+R++    K +D  +P P    E+D 
Sbjct: 612 LAYIRPETQDSNFNWIDLATKNNSELLNNLGNFVNRALMFSEKFFDCNVP-PTKLEEADW 670

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAS 445
           ++L++  R L      M+   +   L  ++++    ++Y   Q+PW   K    + +RA 
Sbjct: 671 TVLALAQRELTSYINAMEQAKLRDGLKHILAISKHGNQYMQFQQPWVKIKGTDDDKNRAG 730

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTF 503
           TV+ +   +   L+ LL  F+P  A ++   L ++++N  +  + +   L     + K  
Sbjct: 731 TVVAICCNLACLLSALLAPFMPATAKQLRSQLGLSNKNYGYIPEMITNMLPTWHKIGKP- 789

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 790 SPLFTKI 796


>gi|56708349|ref|YP_170245.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670819|ref|YP_667376.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457475|ref|ZP_03665948.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370971|ref|ZP_04986974.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875172|ref|ZP_05247882.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|68565962|sp|Q5NFE7|SYM_FRATT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122970891|sp|Q14GV0|SYM_FRAT1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56604841|emb|CAG45923.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321152|emb|CAL09306.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569212|gb|EDN34866.1| hypothetical protein FTBG_01592 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841171|gb|EET19607.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159964|gb|ADA79355.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 674

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 119/540 (22%), Positives = 223/540 (41%), Gaps = 42/540 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
             + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ FH +
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHTL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-RE 332
           +WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R 
Sbjct: 302 FWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRL 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  + S
Sbjct: 362 TSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELES 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V   
Sbjct: 418 EFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQ 477

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + + L + L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 GINMFKVLIVYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 533


>gi|256810012|ref|YP_003127381.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793212|gb|ACV23881.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 650

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 134/533 (25%), Positives = 243/533 (45%), Gaps = 45/533 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I+TA+AY N   H+GHA    I AD++ ++ +L G + +   GTD HG  I   A+ 
Sbjct: 2   RYLITTALAYTNGPLHLGHARSTYIPADIMCKYLKLRGEEAIHVGGTDNHGVPITLTAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  V++     ++  D+L + +D F +T  + H +T +  + K+ + G IY+   
Sbjct: 62  EGKSPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y  + + +  D  V                               Y        +  
Sbjct: 122 EQFYCPKCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKDPYCVICKGKPEIR 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + YFF+LSA +++L  Y ++  E   P   +N  ++++K  L D  +SR    WG+ I
Sbjct: 182 KTKHYFFKLSALKEELEEYIKNAEEM--PEHVKNMALNWIKE-LHDWDISRD-ISWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFL 279
           P     +MYVW++A   Y++ T  L +            + H IGKDI   HA++WP  L
Sbjct: 238 PGT-NQVMYVWLEAPIGYISFTKMLGDVWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 L-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +   +  LP  V S G++  +G K+S S   V+   + ++    D LRY+LV      KD
Sbjct: 297 IAHGDYNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVKNFDADYLRYYLVMSAPLYKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  +         E D+++L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDESRLKEEDKNLLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ + +N+++     AL  ++ L  E + YF   +PW +   + +R   +LY   + ++ 
Sbjct: 417 IEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--DDENRLEEILYTCCKTVKT 474

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L  LL  ++PK +  + D++         + LD  L+ G  L K    +F + 
Sbjct: 475 LVYLLYPYMPKKSLALLDLMN--------EELDLNLR-GNEL-KKPKIVFKKI 517


>gi|118497075|ref|YP_898125.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|118422981|gb|ABK89371.1| methionyl-tRNA synthetase [Francisella novicida U112]
          Length = 685

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/543 (22%), Positives = 225/543 (41%), Gaps = 41/543 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I  
Sbjct: 10  VTKMRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIML 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A++ G+T +  V + S          +I++D++  T    + +    ++ K+++K  I 
Sbjct: 70  KAKSLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLIS 129

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           K   +  Y    + +  D            E   G   +   A ++P + +         
Sbjct: 130 KKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQ 189

Query: 170 SAYQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           S  Q     ++                  +L  E  N++  + + GL+   +SR    +G
Sbjct: 190 SPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFG 249

Query: 218 IKIP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
             IP  + Q   YVW+DA   Y+ +   Y +  +     FW  +      H IGKDI+ F
Sbjct: 250 FAIPGTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYF 309

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           HA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+  
Sbjct: 310 HALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFA 369

Query: 331 -REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            R  +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  
Sbjct: 370 SRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPE 425

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTV 447
           + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V
Sbjct: 426 LESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQV 485

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               + + + L   L+  +P +  +    L +  +   +    + L     + K F P+ 
Sbjct: 486 CSQGINMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPLA 541

Query: 508 PRF 510
            R 
Sbjct: 542 TRI 544


>gi|134301790|ref|YP_001121758.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|187647721|sp|A4IXI6|SYM_FRATW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134049567|gb|ABO46638.1| methionyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 674

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 119/540 (22%), Positives = 223/540 (41%), Gaps = 42/540 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
             + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ FH +
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHTL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-RE 332
           +WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R 
Sbjct: 302 FWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRL 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  + S
Sbjct: 362 TSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELES 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V   
Sbjct: 418 EFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQ 477

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + + L + L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 GINMFKVLIVYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 533


>gi|134097405|ref|YP_001103066.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|187647765|sp|A4F7W6|SYM_SACEN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|133910028|emb|CAM00140.1| methionyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 593

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 154/579 (26%), Positives = 242/579 (41%), Gaps = 85/579 (14%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I+  A   G++T
Sbjct: 4   VAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPISVQADKEGLST 63

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RTT   H++  + ++  +   G I     +G  S
Sbjct: 64  RELADKYNRVITEDLQGLGLSYDLFTRTTTGNHYEVVQQIFLALHRNGYIIPKTTTGAIS 123

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYFFRLSAY 172
                     Y        G DG   +   N            PV  +  E   F  + +
Sbjct: 124 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPAELINPVSRINGEKPDFVETEH 183

Query: 173 QDKLLSYYESHPEFILPI---ERRN--EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-- 225
               LS +       L      R N  +    +   ++  ++SR   DWG+ IP D    
Sbjct: 184 LFLDLSAFTESLGKWLSTRTGWRSNVLKFTQNLVEDMRPRAISRD-LDWGVPIPLDGWRD 242

Query: 226 ---YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
                +YVW DA+  Y + +        D    K +  D      + +GKD + FHA  W
Sbjct: 243 QSMKRLYVWFDAVIGYFSASVEWARRTGDPDAWKQFWTDPSAQGYYFMGKDNITFHAQIW 302

Query: 276 PAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA L+                 L LP ++ S  F+   G K S S G VI   + + E G
Sbjct: 303 PALLMGHNGQGDKGGEVGPYGQLNLPDEIVSSEFLTMSGSKFSTSRGTVIYVRDFLREFG 362

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRYF+       +D  +  D   +RVN +LAN  GNLV+RSVSM  K+ +G +P P 
Sbjct: 363 PDTLRYFISVAGPENQDTDFTWDEFVRRVNFELANEWGNLVNRSVSMAAKN-NGAVPAPT 421

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           +   +DE + ++     + +  ++Q      A  + + +VS  ++Y   Q+PW+L K +P
Sbjct: 422 SPRAADEELKTLSRNAFETVGGHLQRSRFKAAAQEAMRVVSAANKYLSDQEPWKL-KEDP 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----------------------- 478
           DR   VL+  ++V+     LL  F+P  A K+ ++L                        
Sbjct: 481 DRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHELLGGTGVWSAQPELREVSDLDVPERE 540

Query: 479 -------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                   A E   ++S +  ++ G  LHK   P+F + 
Sbjct: 541 YPVLMGDYAAEQASWESTE--IEVGRPLHKP-TPLFAKL 576


>gi|332181112|gb|AEE16800.1| Methionyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 781

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 112/562 (19%), Positives = 217/562 (38%), Gaps = 65/562 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  I++A+ Y N  PH+G+  +++ ADV ARF R  G D L+  GTDE+G      A   
Sbjct: 3   RRLITSALPYVNNIPHLGNLIQVLSADVFARFCRSRGYDTLYVCGTDEYGTATETRALEE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             T +   D       D+     I++D F RT+  +  +  + ++  +   G I +    
Sbjct: 63  KKTPRELCDYYHAIHADIYKWFGIAFDHFGRTSAAQQTEIVQRMFLDLDKNGFIRENTIE 122

Query: 126 GWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YFFR 168
             +      +  D  V            +G   +       PV+               +
Sbjct: 123 QLFCPDCGRFLADRFVRGTCPHCGYEDARGDQCENCGKLLEPVELKSPRCSTCGGTPHLK 182

Query: 169 LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + +    L   +                         ++++ GL + +++R    WGI 
Sbjct: 183 STKHLYIDLPAIQKRYGAWMEEASVKGKWAKNAVQMTQAWIRDGLHERAITRD-LKWGIP 241

Query: 220 IPDD--PQYIMYVWIDALTNY-------------------LTTTGYLDNPDGSKAKFWPA 258
           +P       + YVW DA   Y                      + +L       A   P 
Sbjct: 242 VPKTGFEDKVFYVWFDAPIGYISITKALADTLAAHGKDSFDWKSWWLPGESAEAAGKPPV 301

Query: 259 D-LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIE 315
           D    IGKD + FH + +P+ L+ +     K   + S  ++ ++  K SKS G  +   +
Sbjct: 302 DLFQFIGKDNIPFHTVIFPSTLIGSGRDWTKLYHMSSTEYLNYESGKFSKSKGIGVFGSD 361

Query: 316 VIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
             E  +  DA R+++        D  +     +++ N +L   +GNLV+R+++ + + Y 
Sbjct: 362 AKESGIPADAWRFYIFYNRPEKSDTQFLWKDFQEKYNGELIGNLGNLVNRTLTFVSRYYG 421

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G+IP P A    DE + SV      +I E ++   +  A  ++ ++ S  ++ F   +PW
Sbjct: 422 GVIPEPAA----DEQLWSVVRAGESKITELLEWAELKDAFRELFAVSSVANKAFQDGEPW 477

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI---------LFVADENRC 485
           + + T+P++A++++     VI+ L I+   ++P    K+            +  +  +  
Sbjct: 478 KTRNTDPEKAASLIGNLCYVIKDLMIMAHPYLPHYTEKVMSFFGKTIADPVIGTSAPHGA 537

Query: 486 FQSLDQRLKPGFMLHKTFDPIF 507
               D     G       + +F
Sbjct: 538 LTWADLGKTAGLTRVSAPEIVF 559


>gi|254372434|ref|ZP_04987924.1| hypothetical protein FTCG_01659 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570162|gb|EDN35816.1| hypothetical protein FTCG_01659 [Francisella novicida GA99-3549]
          Length = 673

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/539 (22%), Positives = 224/539 (41%), Gaps = 41/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFQQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
             + Q   YVW+DA   Y+ +   Y +  +     FW  +      H IGKDI+ FHA++
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFHALF 301

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REI 333
           WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R  
Sbjct: 302 WPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLT 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +   D   + +    + N+D+   + N+ SR  + I K +D  +    +    D  + S 
Sbjct: 362 SRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAAFIYKKFDATL----SGEIFDPELESE 417

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVT 451
            S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V    
Sbjct: 418 FSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQG 477

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + + L   L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 INMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFLT-NHKIDK-FKPLATRI 532


>gi|330834236|ref|YP_004408964.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566375|gb|AEB94480.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 568

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/546 (25%), Positives = 241/546 (44%), Gaps = 48/546 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y  + PH+G+    I+ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KILVASAWPYVQSVPHLGNLIGSILSADVFARYARLKYGKENVIFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              GV  K   DQ     +++     +IS+D++ RT  + H    R     +        
Sbjct: 62  IKRGVDPKSLTDQAHEYDKELFIKTWNISFDNYTRTESEVHKKFVREF---LLGVAKYIT 118

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQY--------------------------YNAQHN 155
                      +  +  D   KG                                    +
Sbjct: 119 VEEEELPYCEKDKLFLPDRFVKGICPYCGFEDARGDQCDRCGKLLTPSILINPKCAICGS 178

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  + +FF L  + + +  +  S  +   P   +   +S++  GLK  SL+R    
Sbjct: 179 TPVMKRTKHWFFDLRPFSEPIKKWITSSEDM--PENVKGTALSWLNEGLKPRSLTRDN-A 235

Query: 216 WGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPAD----LHVIGKD 266
           WGI    P      +YVW +AL  YL+ T       G   K+   W  D     + IGKD
Sbjct: 236 WGIPAPFPGAEGKTIYVWFEALLGYLSATLEYFTKRGEPEKWKEFWNKDTSRSYYFIGKD 295

Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            + FHA+  PA L+  S +  LP  + +  ++L++G+K SKS    I   E    + VD 
Sbjct: 296 NIPFHAVILPAMLMASSTDYTLPTVIAATEYLLYEGQKFSKSRKIGIWIDEAPFIMDVDY 355

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R+ L+R     KD  +    + + VN +L + IGNLV+R ++MI++ +D  +P+P  F 
Sbjct: 356 WRFILIRMRPEEKDMNFTWTEVIRIVNTELNDDIGNLVNRVITMIMRYFDRRVPSPTNFK 415

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E DE +L      ++++ E  +   +      +++L  E + Y + + PW+  K   + A
Sbjct: 416 EIDEHLLERMRETVKKVGEMFEKGKLKGGTELILALARETNGYINQKAPWDKVKVEKEDA 475

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           +  LYVT  V+R +A++L   +P  A  I+  L +  +   + SL + L PG ++ K  +
Sbjct: 476 ANTLYVTFLVVRAIALMLYPIIPNKAEAIYQQLGLDIKAETWDSLMKPLDPGHIIGKP-E 534

Query: 505 PIFPRF 510
           P+F + 
Sbjct: 535 PVFKKL 540


>gi|152965010|ref|YP_001360794.1| methionyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|187647730|sp|A6W6U1|SYM_KINRD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|151359527|gb|ABS02530.1| methionyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 600

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 142/534 (26%), Positives = 231/534 (43%), Gaps = 56/534 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+  G+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVQAEQEGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RTT   H+   + +++ +   G +      G  S
Sbjct: 68  QQLADRYNRVIAEDLHGLGLSYDLFTRTTTANHYAVVQEMFRTVHRNGYMVARKGMGAIS 127

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHN---------------------PVQWMEEE 163
                     Y        G DG   +   N                     PV ++E E
Sbjct: 128 PSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGNQLDAIELKNPRSRINGETPV-FVETE 186

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221
            ++  L A  + L S+ ++  +         +    + + +K  +++R   DWGI +P  
Sbjct: 187 HFYLDLPALAEALGSWLQTRADTGRWRPNVLKFSQNLLADMKPRAMTRD-IDWGIPVPLE 245

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFH 271
              D+P   +YVW DA+  YL+ +       G     K W  D      + +GKD + FH
Sbjct: 246 GWEDNPAKRLYVWFDAVIGYLSASVEWARRSGDDDAWKAWWTDPAAESYYFMGKDNITFH 305

Query: 272 AIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  WPA LL                NL LP +V +  F+  +G++ S S G VI   +V+
Sbjct: 306 SQIWPAELLAYDGRGSAGGQPGPFGNLNLPTEVVASEFLTMEGKQFSSSRGVVIYVRDVL 365

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
                DALRYF+        D  +       R N++L  G GNLV+R+ S+I K+    I
Sbjct: 366 ARYQPDALRYFISAAGPENNDSDFTWQEFATRTNSELVAGWGNLVNRTASLIAKNVG-EI 424

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G  T++D  +L+  S     +   ++       + + + +V EV++Y   Q+PW++K
Sbjct: 425 PAAGELTDADRDLLATTSGGFSTVGGFIEAHRQRAGIGEAMRVVGEVNKYLTEQEPWKIK 484

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            ++P+R  +VL+VT + +     LL  F+P  A K+               L +
Sbjct: 485 NSDPERMKSVLHVTAQAVSDCRTLLSPFLPHSAQKVHQAFGGVGTVSPLPELRE 538


>gi|329923262|ref|ZP_08278747.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328941497|gb|EGG37788.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 546

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 223/539 (41%), Gaps = 46/539 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   
Sbjct: 3   NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGDHVLYVSGSDCHGTPVAVQAIQE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT     D+    F +    L  SYD + RT +  HH   + L+ K+ D G +Y+    
Sbjct: 63  GVTPGDIADRYHAEFAECFAQLGFSYDLYTRTDQAFHHGVVQELFLKLLDNGHLYRKTVL 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWME 161
             Y   D  +  D  V                                     NP     
Sbjct: 123 QTYCETDRRFLPDRYVEGDCPVCGSRARGDQCDACSTMLDPSDLTNRTCKMCGNPPVERP 182

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            E ++  LS +Q +L         +       +    +++ GL+D + +R    WG  + 
Sbjct: 183 TEHFYVALSHFQAELADDLSHAQGWR--DNAVHMTRRYLEEGLQDRAATRD-LTWGVDVP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-------ADLHVIGKDILRFHA 272
           +P      +YVWI+A++ YL+ +       G   + +           +V GKD + FH 
Sbjct: 240 VPGFEDKKIYVWIEAVSGYLSASKQWAAETGGDWEPFWRKGQGEVTAYYVHGKDNIPFHT 299

Query: 273 IYWPA-FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + WPA    + +L  P ++ S  ++  +G+K S S    I   +++     D++RYFL+ 
Sbjct: 300 LIWPALLKGAGDLHQPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLRRYQPDSIRYFLIA 359

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +         N +L    GNLV+R++    K +DG +P     + SDE   
Sbjct: 360 NGPEKRDADFSWREFIHSHNGELLGAFGNLVNRTLVFANKSFDGKVP---EGSISDEW-Q 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                + Q+    ++   +  AL  + S+V + ++YFD +KPW   K +     T LY  
Sbjct: 416 GRLEALYQQAGALIEEGRLKEALELIFSVVRQANKYFDERKPWIQVKEDRAACGTTLYTC 475

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + ++  LA LLQ F+P   ++I D L +      +  +      G  +H   + +F R 
Sbjct: 476 ILIMANLANLLQPFIPFSCDRIRDFLSLEPPAWKWCHV----PAGRPIH-GVELLFERI 529


>gi|189500062|ref|YP_001959532.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495503|gb|ACE04051.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 703

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 125/558 (22%), Positives = 235/558 (42%), Gaps = 56/558 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  ++TA+ Y N   H+GH A   + AD+  RF R+ G +++   G+DEHG  I   A  
Sbjct: 7   RTLVTTALPYANGPVHLGHLAGVYLPADIYVRFKRMQGENIIHIGGSDEHGVPITITADK 66

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  VD+      D  +   IS+D + RTT   H  T +  + +I  K    K   
Sbjct: 67  EGISPQDVVDRYHSRNMDAFERCGISFDHYGRTTSPVHFRTAQEFFSEIERKNIFVKKKE 126

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------QW 159
             +Y      Y +D  V             G   +      +P               + 
Sbjct: 127 RHFYDPEARRYLSDRYVVGTCPVCNNPEANGDQCEQCGTHLSPRELSNPRSKLSDRTPEL 186

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E   ++F L  +QD+L ++ +SH +        N   +++  GLKD +++R    WGI 
Sbjct: 187 RETLHWYFPLGRFQDQLKNFVDSHDDDWR-ANVLNYTRTWLNQGLKDRAITRD-LHWGIP 244

Query: 220 IPDDPQ----YIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LHVIGKDIL 268
           +P D       ++YVW DA+  Y++ T      +        +W +     ++ IGKD +
Sbjct: 245 VPLDTDEAQGKVLYVWFDAVLGYISFTREWAEKEGNPELWRDYWQSSECRIINFIGKDNV 304

Query: 269 RFHAIYWPAFLLS-------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            FH + +PA L++           L   V +  F+  +G K SKS    +   E ++   
Sbjct: 305 VFHTLMFPAILMAWNEDRVGGKYSLADNVPASEFMNFEGRKFSKSRNYAVYLGEFLDRFP 364

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRY +       KD  +     + R N +LA+ +GN + RS+      +DG +P   
Sbjct: 365 ADTLRYSIAMNYPESKDSDFSWSDFQNRTNGELADTLGNFIKRSIDFTNSKFDGELPYAC 424

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              + D ++    +   +++ +  +      A +  + +    +R+    +PW++ KT+ 
Sbjct: 425 TGEDWD-ALGIDWADSFEKLDQAYEQFHFREAASLTMQIARLANRFLTESEPWKVMKTDR 483

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------VADENRCFQSLDQ-R 492
           + A   + +++ +   LA+     +P  +N+I+ +L         V   +  +      +
Sbjct: 484 EAAGKTMALSLNLCYTLALAWYPVIPHTSNRIYALLGFDQSLDDAVKKGDVTWHMARSPQ 543

Query: 493 LKPGFMLHKTFDPIFPRF 510
           L+ G  LHK  + +F + 
Sbjct: 544 LQKGHKLHKKSEILFTKI 561


>gi|45184691|ref|NP_982409.1| AAL133Wp [Ashbya gossypii ATCC 10895]
 gi|44980037|gb|AAS50233.1| AAL133Wp [Ashbya gossypii ATCC 10895]
          Length = 567

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 185/529 (34%), Positives = 274/529 (51%), Gaps = 50/529 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K +I+T I YPNA+PH+GH Y  +I DV AR+ +L   +VLFTTGTDEHG KI  A++ 
Sbjct: 13  QKFHITTPIFYPNAKPHLGHLYSSLICDVQARWQKLRDSEVLFTTGTDEHGLKIQTASEQ 72

Query: 65  AGV-TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            G  + KVFVD+   +F  + +  +I Y  FIRTT+K H      LW+     G IYKG 
Sbjct: 73  QGYASPKVFVDKLCTHFISLDEQANIGYTRFIRTTDKDHISNVLRLWELCKANGYIYKGE 132

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG----------------QYYNAQHNPVQWMEEEGYFF 167
           +SGWYS+ DE +Y   +V +  DG                       N V    E  YFF
Sbjct: 133 HSGWYSVSDETFYPATKVVQVIDGREFPVMDGSTVTEGAEYINTETRNRVIHQTEVNYFF 192

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKDLSLSRKT--FDWGIKIPDDP 224
           RLS+++++L+S+ + +P FILP  R  +++  + K+ L DLS+SR      WGI +P D 
Sbjct: 193 RLSSFRERLISHLKENPGFILPPSRSAQILDLLLKAELPDLSISRPKTRLKWGISVPGDE 252

Query: 225 QYIMYVWIDALTNYLT------------------TTGYLDNPDGSKAKFWPADLHVIGKD 266
              +YVW DAL NY+T                   +    +  GS  ++W A  H++GKD
Sbjct: 253 SQKIYVWFDALCNYVTSIGGVDAVLEDRPIANLVHSIPQGSVSGSSKEWWNATTHLVGKD 312

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I++FH IYWPA LL+A LPLP+KV  HG  L  G K+SKSLGNV+ P E+IE+   D +R
Sbjct: 313 IVKFHTIYWPAILLAAGLPLPEKVVVHGHWLSDGVKMSKSLGNVVVPEEMIEKYDTDPMR 372

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS---MILKDYDGMIPTP--- 380
           +F++       D  + ++GL +     L +  GNL+ R       I +        P   
Sbjct: 373 WFILEHDTIEHDASFSEEGLCQ-TRELLCSKWGNLLHRCGGPKFNIHRAVQKFHHKPITD 431

Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 E   ++LS  + +  EI + +       AL  + S++++ +      +PW   K
Sbjct: 432 LTKNNPELYGNLLSRLTTLADEIDQLLSKYDTANALRLIWSIINDANMVVQHGEPW---K 488

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
              +    ++Y  VE  R ++I  Q F+P LAN+  D L V  + R  +
Sbjct: 489 KPLEEQDLIIYTAVEAARIVSIAAQPFIPVLANRFLDRLDVHFDKRSLE 537


>gi|241956003|ref|XP_002420722.1| mitochondrial methionyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
 gi|223644064|emb|CAX41807.1| mitochondrial methionyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
          Length = 577

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 181/544 (33%), Positives = 272/544 (50%), Gaps = 51/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  K  VD+ S+NF  +A+  +++YD FIRTT+  H D  R  W  + ++G IY
Sbjct: 75  TAEKLGLEPKTLVDKVSQNFSKLAEQFNVNYDRFIRTTDDDHIDLVRYFWNLMMERGFIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ + +    V  G   +  +   N V + EE  YFF+LS +Q +L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKVVKISSETKNEVVYQEETNYFFKLSLFQKQL 194

Query: 177 LSYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++     + L DLS+SR      W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPTHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDNTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +  + +   +K+       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATEFPQDFEVKDSKYITPENSIWPA-THVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGNV+DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV------------- 393
           ++  +A L     NL+SR         + +    G    +   I+               
Sbjct: 374 QRSRDAVL-GKYCNLISRIGGKNFSIEEAVKSCAGGEFNNIREIIETCTINKDSVDGLLS 432

Query: 394 --------CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-----TN 440
                    + +  ++     N    RA+    S++++ ++ F   +PW   K       
Sbjct: 433 SSSKLTTDLNDLYNQMDHYFTNFEYIRAIQSWWSVINQANQIFQNAEPWTYVKLINSPDT 492

Query: 441 PDRASTVLYVTVEVI--------RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P        V             R  +IL+Q  +P+L+ KI D L V+     F +L   
Sbjct: 493 PAELKEKYRVLTNYFVYLCGETARISSILIQPVMPQLSKKILDRLDVSGRTSDFATLGAD 552

Query: 493 LKPG 496
           LK G
Sbjct: 553 LKYG 556


>gi|261404106|ref|YP_003240347.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280569|gb|ACX62540.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 546

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 224/539 (41%), Gaps = 46/539 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   
Sbjct: 3   NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGDRVLYVSGSDCHGTPVAVQAIQE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT     D+    F +    L  SYD + RT +  HH   + L+ K+ D G +Y+    
Sbjct: 63  GVTPGDIADRFHAEFAECFAQLGFSYDLYTRTDQAFHHGVVQELFLKLLDNGHLYRKTVL 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWME 161
             Y   D  +  D  V                                     NP     
Sbjct: 123 QTYCETDRRFLPDRYVEGNCPVCGSRARGDQCDACSTMLDPSDLTNRTCKICGNPPVERP 182

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            E ++  LS +Q +L     +   +       +    +++ GL+D + +R    WG  + 
Sbjct: 183 TEHFYVSLSHFQAELADDLNNAQGWR--DNAVHMTRRYLEEGLQDRAATRD-LTWGVDVP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-------ADLHVIGKDILRFHA 272
           +P      +YVWI+A++ YL+ +       G   + +           +V GKD + FH 
Sbjct: 240 VPGFEDKKIYVWIEAVSGYLSASKQWAAETGGDWESFWRKGKGEVTAYYVHGKDNIPFHT 299

Query: 273 IYWPA-FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + WPA    + +L  P ++ S  ++  +G+K S S    I   +++     D++RYFL+ 
Sbjct: 300 LIWPALLKGAGDLHQPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLSRYQPDSVRYFLLA 359

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +         N +L    GNLV+R++    K +DG +P     + SDE   
Sbjct: 360 NGPEKRDADFSWREFIHSHNGELLGAFGNLVNRTLVFANKSFDGKVP---EGSISDEW-Q 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                + +E    ++   +  AL  + S+V + ++YFD +KPW   K +     T LY  
Sbjct: 416 GRVEELYREAGALIEEGRLKEALELIFSVVRQANKYFDERKPWIQVKEDRAACGTTLYTC 475

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + ++  LA LLQ F+P   ++I D L +      +  +      G  +H   + +F R 
Sbjct: 476 ILIMANLANLLQPFIPFSCDRIRDFLSLEPPAWKWCHV----PAGRPIH-GVELLFERI 529


>gi|154489135|ref|ZP_02029984.1| hypothetical protein BIFADO_02449 [Bifidobacterium adolescentis
           L2-32]
 gi|154083272|gb|EDN82317.1| hypothetical protein BIFADO_02449 [Bifidobacterium adolescentis
           L2-32]
          Length = 620

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 141/544 (25%), Positives = 234/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+ +  + G IYK    
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKDTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVKG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRAWWNDPTTPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  +  
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T+ D ++L+      + +   ++N     AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 FDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+   + +     LL  F+P  A K+++ L           L++     K
Sbjct: 483 KDNPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEALGGTGVFSPLPHLEEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|119026553|ref|YP_910398.1| methionyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|187646707|sp|A1A3N3|SYM_BIFAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118766137|dbj|BAF40316.1| methionyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 620

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 143/544 (26%), Positives = 236/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+K+  + G IYKG   
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFKQCLENGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELLNPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVKG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRAWWNDPTTPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  +  
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T+ D ++L+      + +   ++N     AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 FDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+   + +     LL  F+P  A K+++ L           L++     K
Sbjct: 483 KDNPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEALGGTGVFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|119356838|ref|YP_911482.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|187647713|sp|A1BF81|SYM_CHLPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119354187|gb|ABL65058.1| methionyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 702

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 129/563 (22%), Positives = 246/563 (43%), Gaps = 56/563 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G +++   G+DEHG  I 
Sbjct: 1   MLHVKRTLVTTALPYANGPVHLGHLAGVYLPADLYVRYKRLKGDNIIHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+      D      IS++ + RTT   HH T R  + +I +KG  
Sbjct: 61  LTAEKEGISPRDVVDRYHGMNLDAFTKCGISFNYYGRTTSAVHHATAREFFSEIENKGMF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +     ++  +   + +D  +             G   +      +P++ +  +     
Sbjct: 121 TRKTEKQFFDKKANRFLSDRYITGTCPICSNPDANGDQCEQCGTHLSPLELINPKSKLSD 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     ++F L  +Q +L SY +SH +   P    N   +++K GL D +++R   
Sbjct: 181 ATPELRETLHWYFPLGRFQSELESYVQSHDKEWRP-NVINYTRTWLKQGLNDRAITRD-L 238

Query: 215 DWGIKIPDDP----QYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVI 263
            WGIK+P +       ++YVW DA+  Y++ T      +      + +  D     ++ I
Sbjct: 239 SWGIKLPLETPEASGKVLYVWFDAVLGYISFTKEWAAQSGQPELWREYWQDPECRMINFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   + 
Sbjct: 299 GKDNVVFHTLMFPAILMAWNKGRKTDLYNLADNVPASEFMNFEGRKFSKSRNYAVYLGDF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+   D LRY +       KD  +     + R N +LA+ +GN + RS+      +DG 
Sbjct: 359 LEKFPADTLRYCIAMNYPENKDSDFSWLDFQNRTNGELADTLGNFIKRSIDFTNSRFDGK 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P      E     +      L+++ +  +      A +  + +    +R+    +PW++
Sbjct: 419 VPCECTPEEWKIPGID-WKETLEKLDQAFEAFHFREATSLGMDIARTANRFLTESEPWKV 477

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---------FQ 487
            K++ + A+  + +++ +   LA++L   +P+ AN+I  +L V                Q
Sbjct: 478 IKSDREGAAKTMAISLNLCYALALVLYPVIPETANRILAMLGVEKSIDDQLDSGKSCIAQ 537

Query: 488 SLDQRLKPGFMLHKTFDPIFPRF 510
            L  +L+ G  L K  + +F + 
Sbjct: 538 ILTPQLEKGHQLRKHSEILFTKI 560


>gi|229099491|ref|ZP_04230419.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228683787|gb|EEL37737.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 544

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 127/538 (23%), Positives = 231/538 (42%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT     D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVVEIADKYHEEFERCFHSLGFTYDCYTRTDSEYHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKT-FDWGIKI 220
             +Y +   F                 R N +     +VK GL+D ++SR       I +
Sbjct: 183 EHFYFALHTFQEQIKGVVEIAKQKGTWRDNAIQLTERYVKEGLQDRAVSRDLPVGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + +  + +       +FW       +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGVGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K YDG++P      E    +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLRFIEKYYDGVVPKGTIHVE----LKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + +   ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKYVGAAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 479 ANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPNRIDSVQPLFERI 527


>gi|194334175|ref|YP_002016035.1| methionyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311993|gb|ACF46388.1| methionyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 704

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 127/564 (22%), Positives = 243/564 (43%), Gaps = 60/564 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  ++  ++TA+ Y N   H+GH A   + AD+  R+ RL G D++   G+DEHG  I  
Sbjct: 3   QNFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRYRRLCGDDIIHIGGSDEHGVPITI 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +  VD+      D      IS+D + RT+ + HH T R  +++I+ K    
Sbjct: 63  TADREGVTPQDVVDRYHGMNLDAFTRCGISFDYYGRTSSRLHHATAREFFREINGKNIFV 122

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE------ 163
           K     ++      + +D  V             G   +      +P++ ++ +      
Sbjct: 123 KKTEKQFFDPSAGRFLSDRYVTGTCPICSSPDANGDQCEQCGTHLSPMELIDPKSKLSNQ 182

Query: 164 --------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                    ++F L  +Q++L  Y  SH +        N   +++K GL D +++R    
Sbjct: 183 VPELRETLHWYFPLGIFQEQLEGYVNSHQDDWR-SNVLNYTRTWLKQGLTDRAITRD-LS 240

Query: 216 WGIKIPDDP----QYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIG 264
           WG+ +P D       ++YVW DA+  Y++ T     D  +  + + +  D     ++ IG
Sbjct: 241 WGVPVPVDGPEALGKVLYVWFDAVLGYISFTRQWAEDRGNPEEWRRYWQDPDCRIINFIG 300

Query: 265 KDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           KD + FH + +PA L++ N         L   V +  F+  +G K SKS    +   E +
Sbjct: 301 KDNVVFHTLMFPALLMAWNQGRDEEVYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEFL 360

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +    D LRY +       KD  +     + R N +LA+ +GN + RS+      ++G++
Sbjct: 361 DSFPADTLRYCIAMNYPENKDSDFSWTDFQNRTNGELADTLGNFIKRSIDFSNVRFEGVV 420

Query: 378 PTPGAFTESDES--ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           P   +    D+   +          + E  +N     A +  + +    +R+    +PW+
Sbjct: 421 PCDCSM---DDWQGLGIDWQDSFACLDEAYRNFHFREAASLSMQIARRANRFLTESEPWK 477

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC--------FQ 487
           + K +P++A+  + +++ +   LA+     +P  A++I+ +L   +            + 
Sbjct: 478 VIKQDPEKAAKTMALSLNLCYTLAVAFYPVIPSTASRIYAMLGFDESLDDSVGSGAVRWD 537

Query: 488 SLDQ-RLKPGFMLHKTFDPIFPRF 510
                +LK G  L +  D +F + 
Sbjct: 538 MAKTPQLKKGHRLGEKSDILFSKI 561


>gi|285019248|ref|YP_003376959.1| methionyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474466|emb|CBA16967.1| probable methionyl-trna synthetase protein [Xanthomonas
           albilineans]
          Length = 686

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 129/541 (23%), Positives = 203/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  RL G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRLHGDRAWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    +       + ++   G I +   
Sbjct: 63  AGVTAEDFIASIQASHERDFAAFGVAFDHYDSTNSAANRALTEAFYARLDAGGHIARRRV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           + +Y      +  D  +             G + +   A + P +  E            
Sbjct: 123 AQFYDPAKGMFLPDRYIKGICPNCGSADQYGDNCEVCGATYAPTELKEPKSVISGTTPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF +  +   L  +            +  E +   + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGRFDRFLRDWLAGDVALPGVKAKLMEWLD-SEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL++   L    G   +   A        H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLSSFQTLCARLGESFEAHLAAGSSTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +         +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTYLDVGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K + G +    A T  D +  
Sbjct: 362 SSGGVDDLDLNLSDFIARVNADLVGKFVNLASRCAGFIDKRFGGTL----AETLPDPAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLY 449
           +     L  IRE         A+ Q ++L  E ++Y D  KPW L K +   A    V  
Sbjct: 418 AHFVAALSPIREAYARNDPASAIRQTMALADEANKYIDEHKPWVLAKQDGAEASLQAVCT 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R LA  L+  +P    +    L        + +L   L       K + P+F R
Sbjct: 478 QGLNLFRVLAAALKPVLPHTCAEAEAFLVAP--LAAWDALQAPLLA--HAIKPYTPLFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|241153667|ref|XP_002407128.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215494043|gb|EEC03684.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 649

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 111/547 (20%), Positives = 227/547 (41%), Gaps = 42/547 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G     
Sbjct: 4   KGERNVLITSALPYVNNVPHLGNIVGSVLSADVFARYCRLRNWNTLYVCGTDEYGTATET 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T +   D+ ++   D+    +IS+D F RTT ++     + ++ K+     + 
Sbjct: 64  KALEMGITPREICDRFNKLHADIYKWFNISFDHFGRTTTEQQTKIAQDIFLKLHKNQYMR 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +      +  R E +  D  V            +G      +   NP +  +        
Sbjct: 124 EEVVEQLFCNRCERFLADRFVEGTCPFCAYEDARGDQCDLCSKLINPTELKQARCKLCKE 183

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               + S +    L   E                    +    ++V+ GLK   ++R   
Sbjct: 184 PPVLKTSRHLFLDLPKLEPAFGEWYRKKTEGDEWTQTAKVITHAWVRDGLKPRCITRD-L 242

Query: 215 DWGIKIP-DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL----HVIGKDILR 269
            WG  +P  D +  +  +   LT        LD    ++      D       + KD + 
Sbjct: 243 KWGTPVPLHDYKDKVTSYAAFLTWAKFPQINLDVEKSAQVFQHKQDFVTLYQFMAKDNVP 302

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH I +P   L  +        + +  ++ ++  K SKS G  +   +  +  +  D  R
Sbjct: 303 FHGIVFPMTQLGTHEHYTTVDHLVAVEYLNYEDSKFSKSRGIGVFGNDAQDTGIPADVWR 362

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+ +    +D  +  + L  + N++L N +GN ++R+++ +  ++ G++P      E 
Sbjct: 363 FYLMYQRPEHQDTSFCWNDLLMKNNSELLNNLGNFINRALTFLSNNFGGIVPEL-QLLEE 421

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---R 443
           D+ +++  + +++     M    +  ++  ++S+    ++Y    KPWEL K  P    R
Sbjct: 422 DKVVIAKVASLVEHYVSLMDKVRLRDSIRCILSVSKVGNQYIQFNKPWELVKGTPAQKLR 481

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           ++TV+ ++  +   L+ LLQ F+P+ +  +   L +    +        LK G  ++K  
Sbjct: 482 SATVIGLSANIACLLSGLLQPFMPETSEALRHQLNIP-LFQLEPHFAPLLKAGHQINKPV 540

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 541 -PLFKKI 546


>gi|116327392|ref|YP_797112.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331994|ref|YP_801712.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280273|sp|Q04Q66|SYM_LEPBJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122284807|sp|Q054R6|SYM_LEPBL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116120136|gb|ABJ78179.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125683|gb|ABJ76954.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 704

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 134/563 (23%), Positives = 231/563 (41%), Gaps = 66/563 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K+ +++A+ Y N   H+GH  E I  D+  RF +  G +  F    D HG  +  AA+
Sbjct: 7   QRKILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAAR 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              +T +  +++  +          I+YD++  T  K + +  + ++ K+ +KG I K  
Sbjct: 67  KEKITPEQLIERVGQEHYTDLTSFGINYDNYDSTHSKANQEISKDIYLKLKEKGHISKRS 126

Query: 124 YSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               Y  +D  +  D  +             G + +   A +NP   ++           
Sbjct: 127 IEQAYCEKDRMFLPDRFIKGTCPNCNSKNQYGDNCEVCGATYNPKDLIDSHCTLCGTPPV 186

Query: 173 QDKLLSYYESHPEFILPIERRN-----------------------EVISFVKSGLKDLSL 209
                  +     F    E+ N                       ++  +  +GL+D  +
Sbjct: 187 VKNSDHIFFKLGNFHKKTEQSNVDFDLQSWIETSEAVSESEGVKKKLKEWFDAGLQDWDI 246

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD-----L 260
           SR    +G +IP +     YVW+DA   Y+             + +K   +  D     +
Sbjct: 247 SRDGPYFGFEIPSEKNKYFYVWLDAPVGYMASSKNFFEKNFPNEPNKFDSFWKDKNSEIV 306

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           H IGKDIL FH ++WPA L  +    P K+  HGFI   GEK+SKS G  I      + +
Sbjct: 307 HFIGKDILYFHTLFWPAMLEGSGYRSPSKIHVHGFIGVNGEKMSKSRGTFIKAKTFAKFL 366

Query: 321 GVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LR++L  ++     D     D    +VNADL   + N VSR  + IL   D    T
Sbjct: 367 DAEHLRFYLAAKLGPGMDDIDLSFDDFVNKVNADLVGNLINSVSRVSTTILDTLDR---T 423

Query: 380 PGAFTESDESILSVC----------SRVLQEIRE-NMQNQLIHRALAQVISLVSEVDRYF 428
            G  +E   ++L                +Q I +   + +   + + ++  L   V+RY 
Sbjct: 424 LGTVSEEGLALLEEILTQPVKTGTRDDSIQNIIKTAYEQRNYAKVMREITRLGDRVNRYV 483

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +   PW+L K NP++A  ++   +   R LAI L   VPK++ +I+ +L +      F+ 
Sbjct: 484 NDNAPWKLIKENPEKAREIVTAVLNASRFLAIYLYPVVPKISEQIYKLLNLKGSPE-FKD 542

Query: 489 LD-------QRLKPGFMLHKTFD 504
           LD        ++ P  M+ K  D
Sbjct: 543 LDKSRILEKTKINPYEMITKRVD 565


>gi|315656075|ref|ZP_07908966.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315493077|gb|EFU82677.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 605

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 144/532 (27%), Positives = 237/532 (44%), Gaps = 53/532 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I  AA+ AG+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEAAGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++N+R   +    L +SYD F RTT   H+DT R ++K + D G +      G   
Sbjct: 68  RELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYDTVRAMFKVVRDNGYMKVQTTRGAIS 127

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P               +++E + 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEFVETDH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PD 222
           YF  L A    L  + +   +         +        +K  +++R   DWGI I   +
Sbjct: 188 YFLDLPALARALNEWLDDREKNGNWRPNVIKFSKNFLKDIKPRAMTRD-IDWGIPIPGWE 246

Query: 223 DPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D    +YVW DA+  Y                  + W  D      + +GKD + FH+  
Sbjct: 247 DQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPESLSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA +L  N              L LP +V S  F+  +G+K + S G VI   +++   
Sbjct: 307 WPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYVRDMLSRY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            VDALRYF+       +D  +      +R N++L    GNLV+R+ SMI K +  + P  
Sbjct: 367 QVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKFGEIPPA- 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KT 439
           G FT  D+++L   +   + + + +++     ALA+++ LV E +RY    +P++LK ++
Sbjct: 426 GDFTAEDQALLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEPFKLKDES 485

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             DR  T+L+V  +V+  L +++  F+P  +N I  +L  A +      +++
Sbjct: 486 QRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVLGGAGDVAPLPRIEE 537


>gi|187649778|sp|A0Q556|SYM_FRATN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 673

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 120/539 (22%), Positives = 223/539 (41%), Gaps = 41/539 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
             + Q   YVW+DA   Y+ +   Y +  +     FW  +      H IGKDI+ FHA++
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFHALF 301

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REI 333
           WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R  
Sbjct: 302 WPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLT 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  + S 
Sbjct: 362 SRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELESE 417

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVT 451
            S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V    
Sbjct: 418 FSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQG 477

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + + L   L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 INMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 532


>gi|315656049|ref|ZP_07908947.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490113|gb|EFU79740.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 605

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 143/532 (26%), Positives = 236/532 (44%), Gaps = 53/532 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I  AA+ AG+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEAAGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++N+R   +    L +SYD F RTT   H++T R ++K + D G +      G   
Sbjct: 68  RELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYETVRAMFKVVRDNGYMKVQTTRGAIS 127

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P               +++E + 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEFVETDH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PD 222
           YF  L A    L  + +   +         +        +K  +++R   DWGI I   +
Sbjct: 188 YFLDLPALARALNEWLDDREKNGNWRPNVIKFSKNFLKDIKPRAMTRD-IDWGIPIPGWE 246

Query: 223 DPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D    +YVW DA+  Y                  + W  D      + +GKD + FH+  
Sbjct: 247 DQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPEALSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA +L  N              L LP +V S  F+  +G+K + S G VI   +++   
Sbjct: 307 WPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYVRDMLSRY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            VDALRYF+       +D  +      +R N++L    GNLV+R+ SMI K +  + P  
Sbjct: 367 QVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKFGEIPPA- 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KT 439
           G FT  D+ +L   +   + + + +++     ALA+++ LV E +RY    +P++LK ++
Sbjct: 426 GDFTAEDQELLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEPFKLKDES 485

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             DR  T+L+V  +V+  L +++  F+P  +N I  +L  A +      +++
Sbjct: 486 QRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVLGGAGDVAPLPRIEE 537


>gi|304391147|ref|ZP_07373099.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326030|gb|EFL93276.1| methionine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 605

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 144/532 (27%), Positives = 237/532 (44%), Gaps = 53/532 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I  AA+ AG+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGIPSDVFSRYMRMRGHDVLMVSGTDEHGTPILVAAEAAGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++N+R   +    L +SYD F RTT   H+DT R ++K + D G +      G   
Sbjct: 68  RELANRNNRAIVEDLCQLGLSYDLFTRTTTGNHYDTVRAMFKVVRDNGYMKVQTTRGAIS 127

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P               +++E + 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLIRPRSKINGETPEFVETDH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PD 222
           YF  L A    L  + +   +         +        +K  +++R   DWGI I   +
Sbjct: 188 YFLDLPALARALNEWLDDREKNGNWRPNVIKFSKNFLKDIKPRAMTRD-IDWGIPIPGWE 246

Query: 223 DPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D    +YVW DA+  Y                  + W  D      + +GKD + FH+  
Sbjct: 247 DQPKRLYVWFDAVIGYLSASIEWARRFGQSPEDWRQWWNDPESLSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA +L  N              L LP +V S  F+  +G+K + S G VI   +++   
Sbjct: 307 WPAEMLGYNGRGDFGGKPGDLGVLNLPTEVVSSEFLTMEGKKFASSRGIVIYVRDMLSRY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            VDALRYF+       +D  +      +R N++L    GNLV+R+ SMI K +  + P  
Sbjct: 367 QVDALRYFISAAGPENQDSDFTWSEFVRRTNSELVAAWGNLVNRTASMIAKKFGEIPPA- 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KT 439
           G FT  D+++L   +   + + + +++     ALA+++ LV E +RY    +P++LK ++
Sbjct: 426 GDFTAEDQALLDAVNAGFETVGDLIESHHQKAALAEIMRLVGEANRYVTTTEPFKLKDES 485

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             DR  T+L+V  +V+  L +++  F+P  +N I  +L  A +      +++
Sbjct: 486 QRDRLGTILHVLAQVVTDLNLMMSPFLPTSSNAIDKVLGGAGDVAPLPRIEE 537


>gi|15669449|ref|NP_248259.1| methionyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501034|sp|Q58659|SYM_METJA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1591898|gb|AAB99269.1| methionyl-tRNA synthetase (metS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 651

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 127/501 (25%), Positives = 229/501 (45%), Gaps = 35/501 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I+TA+AY N   H+GHA    I AD++ ++ +L G DV+   GTD HG  I   A+ 
Sbjct: 2   RYLITTALAYTNGPLHLGHARSTYIPADIIYKYLKLRGEDVIHVGGTDNHGVPITLTAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +  V++     ++  D+L + +D F +T  + H +T +  + K+ + G IY+   
Sbjct: 62  EGKSPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEI 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWM 160
             +Y    + +  D  V                               Y        +  
Sbjct: 122 EQFYCPNCKKFLPDRYVEGICPYCGGEARGDHCEVCGRHLEPFELKDPYCVICKGKPEIR 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +FF+LSA + +L  Y ++  E   P   +N  ++++K  L D  +SR    WG+ I
Sbjct: 182 KTKHHFFKLSALKKELEEYIKNAKEM--PEHVKNMALNWIKE-LHDWDISRD-ISWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFL 279
           P     +MYVW++A   Y++ T  L              + H IGKDI   HA++WP  L
Sbjct: 238 PGT-NQVMYVWLEAPIGYISFTKMLGEIWKKYWLEKDTKIYHFIGKDITVHHAVFWPGML 296

Query: 280 L-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +   +  LP  V S G++  +G K+S S   V+   + ++    D LRY+L+      KD
Sbjct: 297 IAHGSFNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVKNFDADYLRYYLIMSAPLFKD 356

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRV 397
             +  D  K ++N +L N IGN   R ++   + +  +         E D+ +L  C   
Sbjct: 357 CDFSFDDFKNKINNELINIIGNFTHRVLTFTHRKFKKVPIVDEDRLKEEDKELLKKCEET 416

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L+ + +N+++     AL  ++ L  E + YF   +PW +   + +R   +LY   + ++ 
Sbjct: 417 LEAVDKNIRSFKFRDALVNILHLAIEGNSYFQKMEPWAV--DDEERLKEILYTCCKTVKT 474

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  LL  ++PK +  + +++ 
Sbjct: 475 LVYLLYPYMPKKSLALLELMN 495


>gi|256824214|ref|YP_003148174.1| methionyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256687607|gb|ACV05409.1| methionyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 600

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 144/538 (26%), Positives = 230/538 (42%), Gaps = 54/538 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   H+GH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   KVLSAVAWPYANGPRHLGHVAGFGVPSDVYSRYMRMAGHDVLMVSGTDEHGTPILVQAEA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FVD+N+R   +    L +SYD F RTT   HH   R ++  +   G   +   
Sbjct: 63  AGKTPREFVDENNRAICEDLTALGLSYDLFTRTTTVNHHTVVREMFTAVHRNGYFVEQTQ 122

Query: 125 SG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QW 159
            G              +        D+  +G        Q +P               ++
Sbjct: 123 LGAISPSTGRTLPDRYIEGTCPICGDDSARGDQCDNCGNQLDPADLIDPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E   +   L A  D L  +                    +   ++  +++R   DWGIK
Sbjct: 183 IETNHFLLDLPALADALGEWLAERDASGAWRPNVIAFSRNILEEIRPRAMTRD-IDWGIK 241

Query: 220 I----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDIL 268
           +     +D    +YVW DA+  YL+ +        D    + W  D      + +GKD +
Sbjct: 242 VPLPDWEDAPKRLYVWFDAVIGYLSASIEWARRSGDPEAWRSWWNDPETLSAYFMGKDNI 301

Query: 269 RFHAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WPA LL                 L LP  V S  F+  +G++ S S G+VI   
Sbjct: 302 VFHSQIWPAELLAHNGQGSRGGEPGPFGELVLPTTVVSSEFMTLEGKQFSTSRGHVIYVR 361

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+E    DA+RY+L        D  +  +   +R+N +L  G GNLV+R+ SMI K + 
Sbjct: 362 DVMERQQPDAVRYYLSAVAPETSDADFSWEEFARRINGELVAGWGNLVNRTASMIAKSFG 421

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             IP PG   E D ++L         +   ++     +ALA+ + LVSE + Y    +P+
Sbjct: 422 -EIPQPGELQEVDRALLEAVRGGYATVGGLLERFRNRQALAEAMRLVSEANAYISTTEPF 480

Query: 435 ELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +LK   N +R +TVL+   + + +L  LL  F+P  AN++   L           +++
Sbjct: 481 KLKGAENAERLATVLWTCAQAVTELNTLLSPFLPHTANEVEKALGGDAVIAPLPRVEE 538


>gi|126640836|ref|YP_001083820.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 669

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 126/525 (24%), Positives = 222/525 (42%), Gaps = 48/525 (9%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH    I AD+  R  R  G DV +    D HG  I   A+  G++ +  +    +   
Sbjct: 1   MGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIMLRAEANGISPEEQIANVQKEHI 60

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD-- 139
              D   + +D +  T    +      ++ K  + G+I     +  +      + +D   
Sbjct: 61  RDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIAVRPVTQLFDPEKGMFLSDRFI 120

Query: 140 ---------EVYKGADGQYYNAQHN---------------PVQWMEEEGYFFRLSAYQDK 175
                    E   G   +     +N               PV+    + YFF+L  + + 
Sbjct: 121 KGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGATPVEK-SSDHYFFKLPNFAEY 179

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L     +  E  LP+   N++  + ++GL D  +SR    +G +IPD P    YVW+DA 
Sbjct: 180 LQK--WTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFGFEIPDAPNKYFYVWVDAP 237

Query: 236 TNYLTTTGYLDNPDG---SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLP 287
             Y+++            +   FW  D      H IGKDI+ FHA++WPA L  AN   P
Sbjct: 238 IGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVYFHALFWPAMLEGANYRTP 297

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGL 346
             +F +GF+   G+K+SKS G  I     ++ +  + LRY+   +++   +D   + D  
Sbjct: 298 TGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYFASKLSDKVEDSDLNLDDF 357

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            ++VN+DL   + N+ SR    I   ++  + +  A ++    ++         I    +
Sbjct: 358 VQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESD----LVQSFIDAGDSIAAAYE 413

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQA 464
            +    A+ ++++L    ++Y D +KPW L K          V  V + + RQLA+ L  
Sbjct: 414 AREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDVCSVGINLFRQLAVYLAP 473

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +P LA ++ D L +  E+  F+S  Q L     + + F P+  R
Sbjct: 474 VLPTLAQQVQDFLKL--ESFDFESRKQILVS-HEIAQ-FQPLMQR 514


>gi|302775650|ref|XP_002971242.1| hypothetical protein SELMODRAFT_171855 [Selaginella moellendorffii]
 gi|300161224|gb|EFJ27840.1| hypothetical protein SELMODRAFT_171855 [Selaginella moellendorffii]
          Length = 784

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 112/554 (20%), Positives = 220/554 (39%), Gaps = 50/554 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G ++++  GTDE+G      
Sbjct: 8   GRRNILVTSALPYVNNVPHLGNIIGSVLSADVFARYGRLRGYNIIYMCGTDEYGTATETK 67

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+     + + D  DI +D F RT+       C+ ++KK+  +  +Y+
Sbjct: 68  ALEEKTSPKEICDKYHDVHKKVYDWFDIRFDKFGRTSSPEQTVICQSIFKKLLAQDRLYE 127

Query: 122 GCYSGWY---SLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
              +          + +  D  V           +G   +      NP + +E +     
Sbjct: 128 DKINQACRLYCESCQRFLADRFVIGTCPKCGMTARGDQCEKCTHVLNPGELVEPKCKICN 187

Query: 169 LSAYQDKLLSYYESHPEFI---------------LPIERRNEVISFVKSGLKDLSLSRKT 213
            S +  +    +   P+                           ++++ GLK   ++R  
Sbjct: 188 SSPHLRETTHLFLDLPKIKNELVDYVEKTSIAGGWSSNSITITNAWIRDGLKGRCITRD- 246

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRF 270
             WG+ +P       + YVW DA   Y++ T           K    +    +GKD + F
Sbjct: 247 LKWGVPVPLPRFEDKVFYVWFDAPIGYISITANYTPEWEKWWKSEDVELFQFMGKDNVTF 306

Query: 271 HAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRY 327
           H + +P  LL         K + +  ++ ++G K SKS G  +   +  +  V V+  RY
Sbjct: 307 HTVIFPCTLLGTGERWTMMKTLSATEYLNYEGAKFSKSAGIGVFGNDAQDTNVPVEVWRY 366

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAFTE 385
           +L+       D F+    L+ + N +L   +GN V R +S + K          P A   
Sbjct: 367 YLLSIRPEAADTFFSWADLQAKQNNELLKNLGNFVHRCLSFLAKPEGQGYSSKIPDAPGA 426

Query: 386 SDES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            + +    +    S +LQ+  ++M+   +   L   +S+ S  + Y    + W L K + 
Sbjct: 427 EEHALTVKLAEEVSELLQQYVDSMEKTKLKNGLKVAMSISSLGNSYLQESEFWRLYKEDR 486

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI--------LFVADENRCFQSLDQRL 493
              + V+   + +++ LA +L+ F+P  + K+             +  +   F++    L
Sbjct: 487 PSCNIVVRTAIGLVKILATILEPFMPSFSKKVASQLGLDLSDLSLIDADVEAFRTPWVLL 546

Query: 494 KPGFMLHKTFDPIF 507
           + G ++ +     F
Sbjct: 547 RDGHVIGQPDTIFF 560


>gi|229169755|ref|ZP_04297455.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228613794|gb|EEK70919.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 544

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 123/538 (22%), Positives = 222/538 (41%), Gaps = 47/538 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGEHVLYVSGSDCNGTPITIRAKQDG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  K   D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VMVKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y      +  D  V       +                             +     E 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKI 220
           E ++F L  +Q ++    E   +              ++K GL+D ++SR       I +
Sbjct: 183 EHFYFALHKFQQQIKEAVEIAKQKGTWRDNAIQLTERYLKEGLQDRAVSRDLPIGVPIPV 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYWP 276
                  +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I WP
Sbjct: 243 AGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDKEAKTYYVHGKDNIPFHSIIWP 302

Query: 277 AFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N++L    GN V+R++  I K Y G +P        D  +     
Sbjct: 363 NRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGTVPKGS----IDVELKDKVE 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +I
Sbjct: 419 GLYKSVGEAIEQTKFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
              A LL+ F+P  + ++ + L          S+    +P   L    D   P+F R 
Sbjct: 479 ANFAQLLEPFLPFSSERVRNTL---------SSVKVNWEPQNTLPNRIDNVQPLFERI 527


>gi|307718042|ref|YP_003873574.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531767|gb|ADN01301.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 719

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 117/541 (21%), Positives = 223/541 (41%), Gaps = 44/541 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I++A+ Y N  PH+G+  +++ ADV AR+ R  G + L+  GTDE+G      A 
Sbjct: 2   KKKRLITSALPYVNNVPHLGNLIQVLSADVFARYCRSAGYETLYVCGTDEYGTATETRAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ K   D+      ++ +  +I +D + RT+   H    + ++ K+   G I +  
Sbjct: 62  EEGISPKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIKERT 121

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
               YS +   +  D  V            +G   ++     +P + +E           
Sbjct: 122 IQQLYSEKSGMFLADRYVRGTCPHCGYEDARGDQCEHCGKLLDPTELIEPRSAIDGSTPV 181

Query: 167 FRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            R + +    L       +                     S+++ GL++  ++R    WG
Sbjct: 182 LRETKHLYLDLPALLPKLKAWMEKASVEGRWATNAIRMTESWIRDGLRERCITRD-LKWG 240

Query: 218 IKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
           + +P       + YVW DA   Y++ T    +      K  P  +     IGKD + FH 
Sbjct: 241 VPVPKPGYENKVFYVWFDAPIGYISITATYTDRWEEWWKN-PDGVELYQFIGKDNIPFHT 299

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P+ LL         K + S  ++ ++  K SKS G  +   +  +  +  D  R++L
Sbjct: 300 VIFPSTLLGTGEGWTLLKTMSSTEYLNYESGKFSKSRGVGVFGNDAKDTGIPADVWRFYL 359

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                   D  +     +++VN +L     NLV+R++S I + Y G IP        D +
Sbjct: 360 FYNRPETSDYTFTWKDFQEKVNGELIGNFANLVNRTLSFIHRFYQGRIPEA----PVDTA 415

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      +  +I E ++   +  A   + +L    ++ F A +PW+ +   P+ A  +L 
Sbjct: 416 LWGRVRELEGQITEYLERAQLRDAFRTMFALSDLGNKAFQAGEPWKTRTERPEEAEKLLR 475

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               ++R LAIL+  ++P  + +I   L        +  L  RL+ G    +  + +F R
Sbjct: 476 NLAYLVRDLAILVAPYLPATSRRILGFLGNPP--ATWAQL-GRLE-GLSEVRKPEILFER 531

Query: 510 F 510
            
Sbjct: 532 L 532


>gi|228993761|ref|ZP_04153666.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765972|gb|EEM14621.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 543

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 123/535 (22%), Positives = 221/535 (41%), Gaps = 43/535 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  GV
Sbjct: 5   FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D     F      L  +YD + RT  + HH+T + ++ ++ ++G IYK      
Sbjct: 65  TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124

Query: 128 YSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEEE 163
           Y      +  D  V  G    +                             N     E E
Sbjct: 125 YCETCTQFLPDRYVEGGCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184

Query: 164 GYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKIP 221
            ++F L  +Q ++      +  E             +++ GL+D ++SR       I + 
Sbjct: 185 HFYFALHKFQPQIKDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRDLPIGVPIPVK 244

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPA 277
                 +YVWI+A+  Y + +       G     + +      +V GKD + FH+I WPA
Sbjct: 245 GYEDKKIYVWIEAVAGYYSASKRWAEEMGEDDGEFWSSSAKTYYVHGKDNIPFHSIIWPA 304

Query: 278 FLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL       
Sbjct: 305 VLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTINAPEN 364

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +         N++L    GN V+R++  I K YDG +P        +  +      
Sbjct: 365 RDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGH----INLELKERIEE 420

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + + +   ++      A+  +   V   ++YFD Q PW+ ++  P      +Y  V  I 
Sbjct: 421 LYRSVGNAIEQAHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEETIYTCVYFIV 480

Query: 457 QLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
             A LL+ F+P  + ++ ++L + +    C   L +R+           P+F R 
Sbjct: 481 NFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERISH-------VQPLFERI 528


>gi|114798101|ref|YP_760532.1| methionyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123028005|sp|Q0C161|SYM_HYPNA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114738275|gb|ABI76400.1| methionyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 579

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 127/565 (22%), Positives = 231/565 (40%), Gaps = 58/565 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M ++ ++ I++A+ Y N   H+G+ A  M+ ADV AR  RL G DV +   TDEHG    
Sbjct: 1   MTQQRRILITSALPYINGVKHLGNLAGSMLPADVYARVMRLQGHDVTYICATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AAQ  G + + + D+     R   +  ++S+D F RT+   +H   + L +++   G I
Sbjct: 61  LAAQATGQSVQAYCDEQYEVQRKAGEGFNLSFDWFGRTSRPANHTLTQHLAQQLEKNGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV----------- 157
                   Y++ D  +  D  V            +G          +PV           
Sbjct: 121 EVRTSKQVYAVDDGRFLPDRYVEGTCPHCGYEKARGDQCDNCGRLLDPVDLINPYSAVSG 180

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               +  + +  +   +  QD  +  + +      P    +    ++  GL   S+SR  
Sbjct: 181 SRNIEIRDTDHLYLLQTGMQD-RIRDWVNAKGKNWPSLAVSIANKWLDEGLIARSISRD- 238

Query: 214 FDWGIKIPDD--------PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD----- 259
             WG+K+ D            + YVW DA   Y++ T  + +       K W  D     
Sbjct: 239 LSWGVKVTDADGNPRPGFENKVFYVWFDAPIGYISATQEWAEATGNDWEKLWLTDKGADQ 298

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPI 314
              +  +GKD + FH + +P  LL +  P     K+ +  ++   G K S S    +   
Sbjct: 299 TEYVQFMGKDNVAFHTVSFPVTLLGSGEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVFMD 358

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +  +  D  R++L+     G D  +  +G +  VN+DLAN +GN ++R        ++
Sbjct: 359 QALSLLPSDYWRWYLISNAPEGSDAAFTWEGFQAAVNSDLANVLGNFINRITKYCASKFE 418

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G IP  G   +++  + +  +  L  + E  +     +A A+  ++ +  + Y    +PW
Sbjct: 419 GKIPETGTSGDAEAWMANELAERLPRLIEFYEAMEFRKAAAETRAIWAAGNEYLTKAEPW 478

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR---------C 485
              K + D A+  +   + +     I+ Q  +P  A KI D L + +ENR          
Sbjct: 479 VKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAAKKILDALGIPEENRKMPAGSKPED 538

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRF 510
           F +L   +  G  +    D +F + 
Sbjct: 539 FAALLDAIPRGHAI-SPPDVLFQKI 562


>gi|320156804|ref|YP_004189183.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932116|gb|ADV86980.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 660

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 125/521 (23%), Positives = 214/521 (41%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G++ +  +   S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMSPEEMIAAVSIEHQKDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T    + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +        ++W  D      H IGKDI+ FH+++WPA L  +    P  VF 
Sbjct: 238 GSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFWPAMLDGSGFRKPNNVFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  +     +E +  + LRY+   +  +   D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N I NL SR+   I K ++G +       E     ++   R    I E  + +   
Sbjct: 358 ADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEFVAAADR----IAELYEAREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +P L
Sbjct: 414 RAIREITALADKANQYVDEKAPWVVAKQEGKDQELQEICSVGINLFRVLMTYLKPVMPAL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           A +    L    E   ++ + Q L     +   F  +F R 
Sbjct: 474 AARTEAFLN---EELTWEGVAQPLTA-HEITA-FKALFNRI 509


>gi|320581006|gb|EFW95228.1| Methionyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 754

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 98/545 (17%), Positives = 218/545 (40%), Gaps = 41/545 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + ++  GTDE+G      
Sbjct: 196 NERNILITSALPYVNNVPHLGNIVGSVLSADIYARYCKRRNYNAIYICGTDEYGTATETK 255

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +   D+      D+     I +D F RTT  +  +  + ++ K+ + G + +
Sbjct: 256 ALEDKVTPQELCDKYHAVHSDVYKWFQIGFDHFGRTTTPKQTEIAQEMFLKLYNNGYLEE 315

Query: 122 GCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY- 172
                 +    + +              Y+ A G   +   N +   E      +L  + 
Sbjct: 316 KVMKQLFCPVHKGFLADRYVEGECPRCHYEDARGDQCDKCGNLLDPFELINPRCKLDGHT 375

Query: 173 -QDKLLSYYESHPEFILPIERRN----------------EVISFVKSGLKDLSLSRKTFD 215
            + +  ++     + + P  R+                    S++K GL+   ++R    
Sbjct: 376 PEPRESNHIFISLDKLEPEVRKWIGEASEKGKWSKNSKTITNSWLKEGLQPRCITRD-LT 434

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  +P       ++YVW DA   Y++ T    +      +  P  +     +GKD + F
Sbjct: 435 WGTPVPLKGFENKVLYVWFDAPIGYISITANYTDEWRDWWQN-PEHVQLYQFMGKDNVPF 493

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALRY 327
           H + +P+  +           + +  ++ ++G K SKS G  +         V     RY
Sbjct: 494 HTVVFPSTEIGTKEKWTMLHHLNTTEYLQYEGGKFSKSRGIGVFGNNAEATGVSPSVWRY 553

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES 386
           +L       +D  +       R N++L   +GN V+R    ++  Y+G++P+        
Sbjct: 554 YLASVRPENQDSQFSWYEFVTRNNSELLANLGNFVNRLAKFVIAKYNGVVPSFRTEDCPV 613

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
              +L   + +++   ++M+   + + L   + + +  + +    K    L    P+++ 
Sbjct: 614 YPELLKDLNSLVKTYVDDMETVHLRKGLETAMMISARGNLFLQENKLDNSLYNDFPEKSD 673

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V+ + + ++  ++ ++  ++P+ + +I +IL V  E +        ++PG  + K    
Sbjct: 674 AVVAIGLNIVYLVSAVIAPYMPETSKQIEEILRVP-ELKIPDEFGLWIQPGHCIGKA-QY 731

Query: 506 IFPRF 510
           +F R 
Sbjct: 732 LFKRI 736


>gi|169656526|ref|YP_001427901.2| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254368695|ref|ZP_04984709.1| hypothetical protein FTAG_01719 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|187649783|sp|A7NAE2|SYM_FRATF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157121610|gb|EDO65787.1| hypothetical protein FTAG_01719 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551594|gb|ABU60945.2| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 674

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 120/540 (22%), Positives = 223/540 (41%), Gaps = 42/540 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
             + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ FHA+
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHAL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-RE 332
           +WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R 
Sbjct: 302 FWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRL 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  + S
Sbjct: 362 TSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELES 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V   
Sbjct: 418 EFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQ 477

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + + L   L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 GINMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 533


>gi|301633711|gb|ADK87265.1| methionine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 512

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 164/515 (31%), Positives = 253/515 (49%), Gaps = 14/515 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ YI+T I Y + +PHIGHA+  I+ADV+ R+ + +G +  F TGTDEHG KI   A++
Sbjct: 2   KRCYITTPIYYASGKPHIGHAFTTILADVIKRYKQQNGYEAYFLTGTDEHGNKIESKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + FVDQN   F+ M   LDI++D FIRTT+  H    +  ++ + DKG IY+  +
Sbjct: 62  LGLDPQTFVDQNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQQAFQLLYDKGLIYQSNW 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E  Y   +         +      +  ++E   F      +D +     ++ 
Sbjct: 122 EGAYCVECEQNYFTYDKQTMLCEIGHQ-----LTLVQEPSLFIAFKDSKDWIGEMIATNK 176

Query: 185 EFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
             I P  R  E   +F+  GL DL+L+R+   WGI +P D +  +YVW DAL NY+T  G
Sbjct: 177 LNITPESRAAELKNNFLDGGLNDLALTRQNVTWGIPVPFDNKQTIYVWFDALFNYITNLG 236

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           +  N       +   D     +H+I ++I RFH IYWP FL      LP +  SHG+I+ 
Sbjct: 237 FAHNDPKFNKWWNNNDEEHEVIHLISREITRFHCIYWPIFLHQLGFKLPTQFLSHGWIVD 296

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGNVI P E++ + GVD  RY L++E+   KD        K   NADLAN 
Sbjct: 297 GNGHKMSKSLGNVISPEELLAQFGVDGTRYCLLKEMRLDKDNRCSMAIFKDIYNADLANS 356

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GN  SR+  MI K   G +          + ++    + + +      N   ++ +  +
Sbjct: 357 FGNHASRTFGMIKKYLGGQLDFIEVQDPQVKQLMDQADQAMVQFDTAWNNFQFYKGINGL 416

Query: 418 ISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + LV +  +  D  KPWEL K T+      +L+  V   +   +LL   +   + +IFD+
Sbjct: 417 LQLVFQASKLIDQLKPWELVKQTDYTLLKQLLFACVRCTQVCFVLLAPILVHTSTQIFDL 476

Query: 477 LFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
              + + R    L D +      L      +F R 
Sbjct: 477 FNFSAQARSKTHLADPQQLQKISLAPVIQLLFKRL 511


>gi|317405565|gb|EFV85868.1| MetG protein [Achromobacter xylosoxidans C54]
          Length = 688

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 225/554 (40%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   I +D +  T    +    + +++ +  +  I     
Sbjct: 63  EGITPQALVARYAAERPQYLNGFHIRFDHWHTTDSPENVALSQDIYRALKAQDLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P   +             
Sbjct: 123 EQFYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLINPYSALTGATPVL 182

Query: 163 ---EGYFFRLSA------YQDKLLSYYESHPEFILPIE----RRNEVISFVKSGLKDLSL 209
              + +FF+LS        Q           + + P      R        ++ L D  +
Sbjct: 183 KSSDHFFFKLSDPRCVEFLQQWTTGSNAHGGKHLQPEMLAKTREWLGAEDGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD----LHVI 263
           SR    +GI+IPD P    YVW+DA   YL +        G        PA     +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPAGSTEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P  V  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYLELGMNA 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  +  A  +D  ++ +    RVN+DL     N+ SR+ S I K +DG +   G
Sbjct: 363 EWMRYYIAAKLNARVEDMDFNPEDFIARVNSDLVGKYVNIASRAASFITKHFDGALAYSG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                     +  +   + IR   + +  +RA+ ++++    +++ FD  +PW L K   
Sbjct: 423 DTAAL----AAEYAAQAESIRAAFEAREYNRAIREIMAYADRINQAFDTAQPWVLAKGIA 478

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQ 491
                       +   ++   + L+++L   +P LA ++   LF AD +  +     L Q
Sbjct: 479 TADEAQKAALQDICSRSLAGFKALSVMLAPVLPALAERVARELFAADADFTWADAAVLPQ 538

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  +P
Sbjct: 539 RVAPFKHLMQRVEP 552


>gi|238062568|ref|ZP_04607277.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237884379|gb|EEP73207.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 603

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 141/526 (26%), Positives = 229/526 (43%), Gaps = 62/526 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GVT 
Sbjct: 11  VAWPYANGPRHIGHVSGFGVPSDVFARYMRMAGHDVLMVSGTDEHGTPIQVQADAEGVTP 70

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   D+ +R   +    L +SYD F RTT + H+   + L+  +   G I     +G   
Sbjct: 71  RELADRYNRVIAEDLRALGLSYDLFTRTTTRNHYAVVQELFSGLHRNGYIVPKVTTGAIS 130

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         +  +G        Q +PV              +++E E 
Sbjct: 131 PSTGRTLPDRYIEGTCPICGYDSARGDQCDNCGNQLDPVDLINPKSKINGETPEFVETEH 190

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A  D L  + +    +   + R +  +      L+  +++R   +WG+ IP D 
Sbjct: 191 FFLDLPALADALRRWLDGREGWRPNVLRFSRNLL---DDLQPRAITRD-LEWGVPIPLDG 246

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------LHVIGKDIL 268
               P   +YVW DA+  YL+ +       G      ++W  D         + +GKD +
Sbjct: 247 WRDRPDKRIYVWFDAVIGYLSASIEWARRTGDPEAWRRWWSVDAEGKDALSYYFMGKDNI 306

Query: 269 RFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH++ WPA                    L LP +V S  ++  +G K S S   VI   
Sbjct: 307 VFHSVIWPALLGGYSGAGDRDGEPGALGRLNLPTEVVSSEYLTMEGRKFSSSRKVVIYVR 366

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E    DALRYF+        D  +      +R N +L  G GNLV+RSVSM  K++ 
Sbjct: 367 DFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSVSMAAKNFG 426

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            + P  P   TE+DE++L+        + + +      +A+ + + +V+E ++Y   Q P
Sbjct: 427 AIPPVDPAGLTEADEALLATARVGFDTVGDLIGRHRQKQAIGEAMRVVAEANKYLSEQAP 486

Query: 434 WELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+LK+  +  R  T+L+V ++V+     LL  F+P  A +I ++L 
Sbjct: 487 WKLKEPADKPRMGTILHVALQVVSDANTLLTPFLPHSAQQIHELLG 532


>gi|150401049|ref|YP_001324815.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187647735|sp|A6UUN1|SYM_META3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150013752|gb|ABR56203.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 672

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 130/534 (24%), Positives = 229/534 (42%), Gaps = 42/534 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++TA+AY N   H+GHA    I AD++ R+ +L G DV+   GTD HG  I   A+ 
Sbjct: 4   KYLLTTALAYTNGPLHLGHARSTYIPADIIKRYLKLKGNDVIHVGGTDNHGVPITLTAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  V++     +   D L + +D + +T    H    +  +KK+ + G IY+   
Sbjct: 64  EGVKPEDIVNKYHNEIKRDLDNLSVEFDSYGKTHSDTHIQNAQEFYKKLKENGYIYEKEI 123

Query: 125 SGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             +Y    + +  D  V           +G   +       P + +         +    
Sbjct: 124 EQFYCPDCDKFLADRYVEGSCPFCEGEARGDHCEVCGRHLEPTELVNPYCVICNATPQLK 183

Query: 175 KLLSYYE-----------SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           K   Y+                  +P   +N   S+++  L D  +SR    WG+ IPDD
Sbjct: 184 KTTHYFFKLSALSDNLDNYVKNSNMPDHIKNMAYSWIRE-LHDWDISRG-IKWGVPIPDD 241

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------LHVIGKDILRFHAIY 274
              +MYVW++A   Y++ T  + +           +          H IGKDI   HA++
Sbjct: 242 ENQVMYVWLEAPIGYISFTKMMGDIWKEYWLKNNDNNTENQNTKIWHFIGKDITVHHAVF 301

Query: 275 WPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           WP  LL      LP  +FS G++  +G+K+S S   V+   + I+    D LRYFL+   
Sbjct: 302 WPGMLLGHGEYNLPNSIFSGGYLTLEGKKMSTSKKWVVWVDDFIKYFDSDYLRYFLMANA 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESI 390
              +D  +  D  +KR+N +L   I N   R++    + +     +        + D ++
Sbjct: 362 PLNRDCDFSFDEFQKRINTELIAIIANFTHRALVFSHRKFGALPVIDKPEEELNKEDLAL 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L  CS  +++  +NM +  +  AL  +I L  E + YF   +PW +   + +R   +++V
Sbjct: 422 LDKCSETIEKYNKNMMDCNLKDALVDIIHLAKEGNNYFQKMEPWTV--DDENRLKQIMFV 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              + + +A LL  F+P   N++ D++    E    +     LK   ++    +
Sbjct: 480 CGVITKHIAYLLYPFMPNKTNELLDLMN---EEMDLEIRGNELKKPIVVFSKIE 530


>gi|229819468|ref|YP_002880994.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511556|sp|C5C046|SYM_BEUC1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229565381|gb|ACQ79232.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 614

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 141/541 (26%), Positives = 226/541 (41%), Gaps = 62/541 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+  GVT 
Sbjct: 8   VAWPYTNGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVLAEQEGVTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   D    L +SYD F RTT + H+   + +++ +   G + +    G  S
Sbjct: 68  QELTDRYNRVIVDDLANLGLSYDLFTRTTTRNHYAVVQEMFRTVHKNGYMVEQTTMGAIS 127

Query: 130 LRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFRLSAY 172
                     Y        G DG   +               NP   +  E   F  + +
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAVDLINPRSRINGEKPTFIETQH 187

Query: 173 QDKLLSYYES--HPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIP-----DD 223
               L                 R  V++F  + L DL     T   DWGI +P     D+
Sbjct: 188 FFLDLPALADALGAWLRTRTHWRPNVLNFSLNLLDDLRPRAMTRDIDWGIPVPLPGWEDN 247

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDG-------------SKAKFWPA------DLHVIG 264
           P   +YVW DA+  YL+ +                      +A + P         + +G
Sbjct: 248 PAKRLYVWFDAVIGYLSASIEWARRQELAAGGAGTPDAEAWRAWWNPTPGLDQQSYYFMG 307

Query: 265 KDILRFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA                +   L LP +V S  F+  +G++ S S G V
Sbjct: 308 KDNITFHSQIWPAELLGYAGKGSRGGEPGIYGELNLPTEVVSSEFLTTEGKQFSTSRGVV 367

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +   +++     DALRYF+        D  +     K+R N +L  G GNLV+R+ +M+ 
Sbjct: 368 VYVRDMLARYQPDALRYFIAVAGPESSDSDFTWSEFKRRTNDELVAGWGNLVNRTATMVH 427

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++   +P PG     DE++L+       ++   ++ Q    A+ + + +V EV++Y   
Sbjct: 428 KNFG-AVPEPGERLAVDEAVLATTRAGFAQVGRLLETQRQRAAVTEAMRVVGEVNKYVSE 486

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
            +PW+L KT+ DR +TVL+   + +    +LL  F+P  A +I   L           +D
Sbjct: 487 TEPWKL-KTDRDRLATVLHTATQAVADCNVLLAPFLPHAAQEIHSALGGTGTLAPQPRVD 545

Query: 491 Q 491
           +
Sbjct: 546 E 546


>gi|238882840|gb|EEQ46478.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 577

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 185/544 (34%), Positives = 280/544 (51%), Gaps = 51/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  +A+  D++YD FIRTT+  H +  R  W  + +KG IY
Sbjct: 75  TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ + +    V  G   +  +   N V + EE  YFF+LS +Q++L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQEETNYFFKLSMFQEQL 194

Query: 177 LSYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++     + L DLS+SR      W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +    +   +KF       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPA-THVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGNV+DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR---------------------SVSMILKDYDGMIPTPGAFTE 385
           ++  +A L     NL+SR                     ++  I++ Y     +      
Sbjct: 374 QRSRDAVL-GKYCNLISRIGGKNFSIEEAVKSFASGEFNNIREIIETYTINKDSVEGLLS 432

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-----TN 440
           S   + +  + +  ++     N    RA+    S++++ ++ F + +PW   K       
Sbjct: 433 SLNKLTTDLNDLYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPET 492

Query: 441 PDRASTVL--------YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P               Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +L   
Sbjct: 493 PAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTLSAD 552

Query: 493 LKPG 496
           L+ G
Sbjct: 553 LQYG 556


>gi|229816972|ref|ZP_04447254.1| hypothetical protein BIFANG_02226 [Bifidobacterium angulatum DSM
           20098]
 gi|229785717|gb|EEP21831.1| hypothetical protein BIFANG_02226 [Bifidobacterium angulatum DSM
           20098]
          Length = 620

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 143/544 (26%), Positives = 235/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+K+  + G IYKG   
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFKQCLENGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVKD 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +       G     + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGDSEAWRAWWNDPSTPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILS 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMI 377
              VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++ +   
Sbjct: 364 RYPVDAVRYYISIAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLIAKNFGEIPA 423

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                 T+ D ++L+  +         ++N     AL + + +V  +++Y  A +PW++ 
Sbjct: 424 ADENEMTDEDRALLAETNEAFATAGNFIENHRQKAALLEAMRIVGNINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+V  + +     LL  F+P  + K+++ L           +++     K
Sbjct: 483 KDNPARLGTVLHVAAQAVSDANHLLAPFLPHASQKVWEALGGKGTFSPLPHIEEVEDLDK 542

Query: 495 PGFM 498
           PGFM
Sbjct: 543 PGFM 546


>gi|319950591|ref|ZP_08024499.1| methionyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319435730|gb|EFV90942.1| methionyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 617

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 142/525 (27%), Positives = 218/525 (41%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  +   A+
Sbjct: 3   KTVLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNDVLMVSGTDEHGTPLLVQAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV  +   D+ +R   D    L +SYD F RTT + H+   + L++ +   G +    
Sbjct: 63  KEGVPVQELADRYNRVIVDDLAGLGLSYDLFTRTTTRNHYAVVQELFRGLHRNGYMVAKT 122

Query: 124 YSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYF 166
            +G  S          Y        G DG   +               NP   +  E   
Sbjct: 123 TTGAVSPSTGRTLPDRYIEGTCPICGDDGARGDQCDNCGNQLDPADLKNPRSRINGETPK 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L          L   R++   + +K  L  L   R        DWGI IP
Sbjct: 183 FIETEHWFLDLPALADSLGDWL-KGRKDWRPNVLKFSLNLLEDLRPRAMSRDIDWGIPIP 241

Query: 222 DD-----PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILR 269
            D         +YVW DA+  YL+ +             + W  D      + +GKD + 
Sbjct: 242 VDGWADRGDKKLYVWFDAVVGYLSASIEWAWRTGEPEAWRRWWTDPEAVSHYFMGKDNIT 301

Query: 270 FHAIYWPAFLL-------SANLP-------LPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA L+           P       LP +V S  F+   G K S S G VI   +
Sbjct: 302 FHSQIWPAELIGYDGRGAHGGEPGPLGALTLPTEVVSSEFLTMSGSKFSSSRGVVIYVRD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G DALRYF+       +D  +  D   +R NA+L  G GNLV+R+VSM  K++  
Sbjct: 362 FLAEFGPDALRYFIAVAGPENQDTDFTWDEYVRRTNAELVGGWGNLVNRTVSMAHKNFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            IP PG  T+ D  +L         +  +++       + + + +V   +RY  A +PW+
Sbjct: 421 EIPRPGTLTDLDAELLRDAESAFATVGAHLERSRFKAGVTEAMRIVGAANRYIAATEPWK 480

Query: 436 LKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R  TVL+  ++V+     LL  ++P  A +I   + 
Sbjct: 481 LAKEPEQRERLGTVLHTALQVVSDANTLLTPYLPSAAQQIHGAIG 525


>gi|212550457|ref|YP_002308774.1| methionyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548695|dbj|BAG83363.1| methionyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 557

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 141/543 (25%), Positives = 236/543 (43%), Gaps = 36/543 (6%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+  ++  I++A+ Y N   HIGH A   I AD+ AR+ RL G +VLF  G+DEHG  IA
Sbjct: 1   MENYKRFLITSALPYANGPVHIGHLAGVYIPADIYARYLRLRGEEVLFIGGSDEHGVPIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G T +  VD+     +   +   I++D + RT+   HH T    ++ + DKG +
Sbjct: 61  LKAREEGSTPQKVVDRYHHLIKKSFEDFGITFDIYSRTSSLIHHQTASEFFRHLYDKGKL 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW--------- 159
            +     +Y    + +  D  +             G   +   A  N +           
Sbjct: 121 VEKITGQYYDTHAKLFLADRYISGTCYLCGYKQAYGDQCESCGAFINAMDLLDPKSVITN 180

Query: 160 -----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + ++  L  Y  + L  +              +  S++++GL   ++SR   
Sbjct: 181 TLPKVRETKHWYLPLDEY-TEWLKKWILEEHREWKTNVVGQCKSWLETGLFHRAVSRD-L 238

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRF 270
           DWGI +P       ++YVW DA   Y++ T      D  K    P+   +H IGKD + F
Sbjct: 239 DWGIPVPIKGAEGKVLYVWFDAPIGYISNTIEYSPNDWKKWWKDPSTKLVHFIGKDNIVF 298

Query: 271 HAIYWP-AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRY 327
           H I +P          LP  V ++ F+  +GEKIS S    +   E +EE     D LRY
Sbjct: 299 HCIIFPVMLKAHEGYILPDNVPANEFLNLEGEKISTSRNWAVWLHEYLEEFPGQQDVLRY 358

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+      KDG +     + R N +L   +GN V+R + +  K ++G +P  G   + D
Sbjct: 359 VLIANAPETKDGDFTWRDFQARNNNELVAILGNFVNRVLVLTHKYFEGKVPKLGELRDYD 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            ++L    R    +   +       AL + +SLV   ++Y    + W+  + +  R +TV
Sbjct: 419 RNVLEKFFRSKIILENYLGQYHFRDALKEAMSLVRIGNKYLTDTEAWKTARKDIFRTATV 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           L V +++I  L I+ + F+P   +KI   +   +           L+ G  L+  FD +F
Sbjct: 479 LNVALQMIVNLTIVFEPFLPFTVDKICRFIRKGNLKWSQFGEMNLLEAGHQLN-PFDLLF 537

Query: 508 PRF 510
            + 
Sbjct: 538 EKI 540


>gi|221633508|ref|YP_002522733.1| methionyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|254782874|sp|B9KZR0|SYM_THERP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221156139|gb|ACM05266.1| methionyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 584

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 141/515 (27%), Positives = 224/515 (43%), Gaps = 42/515 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + +  A  Y N   H+GH A   I AD  AR+HRL G  VL  +G+D HG  I  AA+
Sbjct: 3   ETIGVFVAWPYANGDLHLGHVAGVYIPADTFARYHRLRGNRVLMVSGSDAHGTPITVAAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +    +    F +    L IS+D F  T    H    + +++ + +KG I+   
Sbjct: 63  REGVTPEDIFRRYHGRFLETYQQLGISFDLFTHTHTANHFRVAQDIFRTLYEKGYIFTQT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGA--------------------------DGQYYNAQHNPV 157
               Y   D  +  D  V                              D +       P+
Sbjct: 123 QIQLYCEYDRRFLPDRYVEGTCPYCGYPNARGDQCDNCGRTLDAIDLIDPRCRLCGQRPL 182

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E E +FF L A+ D+LL+Y E    +      ++ V +F++ GLK   +SR   +WG
Sbjct: 183 -PRETEHFFFDLPAFTDRLLAYLERQTHWR--PNVQHFVRNFIQDGLKPRPVSRD-LEWG 238

Query: 218 IK--IPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVIGKDIL 268
           I   IP     +MYVW +A+  YL+ +             + W  D      + IGKD +
Sbjct: 239 IPLPIPGYEHKVMYVWFEAVIGYLSASIEWSLAEGQPEVWQVWWRDPRARGYYFIGKDNI 298

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FHAI WPA L+  +  L LP  + ++ F+  +G++ S S    I   + +     D LR
Sbjct: 299 PFHAIIWPAELMGYDESLNLPYDIPANEFLNLEGQQFSTSRNWAIWVPDFLSRYAPDPLR 358

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            +L       +D  +   G  +R N +L    GNLV R ++ +   ++G +P PGA    
Sbjct: 359 DYLTSIAPETRDSEFTWQGFVERNNNELLATWGNLVHRILTFVQARFEGRVPEPGALDGR 418

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D  +L   +   Q I +      +  A  + ++L  EV+RY D + PW   + +   A+T
Sbjct: 419 DHLLLDQIAAGFQRIGDLYARVELKAAQREAMALAREVNRYLDEKAPWFQIREDRAAAAT 478

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            L+V +  I  L +LL   +P  + ++  +L   D
Sbjct: 479 TLFVALRAIDSLKLLLAPILPFTSEQLHRLLGYRD 513


>gi|115314340|ref|YP_763063.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122325627|sp|Q0BNA8|SYM_FRATO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115129239|gb|ABI82426.1| methionine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 674

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 120/540 (22%), Positives = 223/540 (41%), Gaps = 42/540 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFICGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
             + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ FHA+
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHAL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-RE 332
           +WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R 
Sbjct: 302 FWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRL 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  + S
Sbjct: 362 TSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELES 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V   
Sbjct: 418 EFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQ 477

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + + L   L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 GINMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 533


>gi|306824171|ref|ZP_07457542.1| methionine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309801107|ref|ZP_07695237.1| methionine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304552559|gb|EFM40475.1| methionine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308222333|gb|EFO78615.1| methionine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 620

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 144/544 (26%), Positives = 237/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+ +  + G IYKG   
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        G+DG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI IP   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPIPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +       G     + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRAWWNDPTTPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILS 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K++  +  
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T+ D ++L+  +     I   ++N     AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+V  + +     LL  F+P  A K+++ L           L++     K
Sbjct: 483 KDNPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGFM
Sbjct: 543 PGFM 546


>gi|89255854|ref|YP_513216.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|254367221|ref|ZP_04983250.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|123094534|sp|Q2A4Y6|SYM_FRATH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89143685|emb|CAJ78884.1| Methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134253040|gb|EBA52134.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
          Length = 674

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 120/540 (22%), Positives = 223/540 (41%), Gaps = 42/540 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   H+GH    I +D+  RF +L G   +F  G+D HG  I   A++
Sbjct: 2   RKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + S          +I++D++  T    + +    ++ K+++K  I K   
Sbjct: 62  LGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAI 121

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  Y    + +  D            E   G   +   A ++P + +         S  Q
Sbjct: 122 AQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQ 181

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                ++                  +L  E  N++  + + GL+   +SR    +G  IP
Sbjct: 182 KNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIP 241

Query: 222 -DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAI 273
             + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI+ FHA+
Sbjct: 242 GTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHAL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-RE 332
           +WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY+   R 
Sbjct: 302 FWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRL 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            +   D   + +    + N+D+   + N+ SR    I K +D  +    +    D  + S
Sbjct: 362 TSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELES 417

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             S+    I +  + +    A+  +++L  + +++ D  KPW+L K      +   V   
Sbjct: 418 EFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQ 477

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + + + L   L+  +P +  +    L +  +   +    + L     + K F P+  R 
Sbjct: 478 GINMFKVLIAYLKPIIPSIVAETERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 533


>gi|229175733|ref|ZP_04303239.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228607684|gb|EEK65000.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 544

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 132/539 (24%), Positives = 239/539 (44%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   D+    F+     L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIADKYHEEFQRCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKAVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILP------------IERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F                 R N +     +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQQQIKEAVEIAKQEGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEETGKDDQEFWDREAKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K YDG++P        +E +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPNGM----INEELKEKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   + E+++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYIYVGESIEQTKFKVALETIFDAVRFANKYFDERQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   NR ++       P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIV--NRNWE-------PQNTLPNRIDSVQPLFERI 527


>gi|46446299|ref|YP_007664.1| putative methionine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|68565984|sp|Q6MDG0|SYM_PARUW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46399940|emb|CAF23389.1| putative methionine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 698

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 131/542 (24%), Positives = 222/542 (40%), Gaps = 38/542 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + AD  ARF RL   DVL+  G+DE+G  I  +A 
Sbjct: 12  QKILITSALPYANGPLHFGHIAGAYLPADCYARFQRLMKKDVLYICGSDEYGIAITLSAD 71

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG T +  VD      +   + L IS+D + RTT K H +     +  +   G I +  
Sbjct: 72  LAGRTPQEHVDLFHHINQSFFEQLQISFDHYSRTTWKGHVEPTHQFFNDLLQNGYIEERT 131

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               YS +D+ +  D  V            +G +     A +   +           S  
Sbjct: 132 TDQLYSEKDQKFLADRYVVGTCPRCGFENARGDECPCCGASYEATELKNPRSKLTDASLI 191

Query: 173 QDKLLSYYESHPEFILPIERRNEVISF----------VKSGLKDLSLSRKTFDWGI--KI 220
                 ++    +F  P+    E  ++              L   +++R    WGI   +
Sbjct: 192 LRPTKHWFLLLEKFKKPLMEWLETKNWKPNVINFIRGYIDHLHARAITRD-MKWGISVPL 250

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKDILRFHAI 273
           PD    ++YVW DA   Y++ T       G +   + +  D     ++ IGKD + FHA 
Sbjct: 251 PDSEGKVLYVWFDAPIGYISATKEWALLRGEEKLWEKYWLDPETKLVNFIGKDNIPFHAS 310

Query: 274 YWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA ++  N P     ++ ++ F   +G++ SKS G  ID  +  +    D +RY +  
Sbjct: 311 IFPAMIMGQNQPYKLVDELPANEFYNLEGKQFSKSDGWYIDLEDFFKHYTSDQIRYAIAS 370

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     + R N+DL    GNLV+R +  I     G +P  G   E D   L
Sbjct: 371 NAPETSDSEFTWKDFQLRCNSDLLGKYGNLVNRVLVFIHNQCQGKVPESGVLEEQDRKFL 430

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                ++ +   +     + +A   ++ L    + YFD++KPW+  K +    R  T L 
Sbjct: 431 KNIQDLVDQAAASYSTFKVRKASQIMMELSQLGNVYFDSKKPWQDAKNDYTKGRMHTTLN 490

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             +E ++ LA++    +P  A+K++  L      E   +  +     P      T   +F
Sbjct: 491 CCMECLKALALISFPIIPTAASKVWQFLGFQTPLEQEDWNRVKIEKLPLNQKILTPQILF 550

Query: 508 PR 509
            R
Sbjct: 551 QR 552


>gi|271969811|ref|YP_003344007.1| tRNA synthetase class I (I, L, M and V) [Streptosporangium roseum
           DSM 43021]
 gi|270512986|gb|ACZ91264.1| tRNA synthetase class I (I, L, M and V) [Streptosporangium roseum
           DSM 43021]
          Length = 593

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 142/583 (24%), Positives = 239/583 (40%), Gaps = 83/583 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  + A  Y N   HIGH     + +D+ +R+ R+ G  VL  +GTDEHG  I   A 
Sbjct: 3   QHILTAVAWPYANGPRHIGHVSGFGVPSDMFSRYQRMVGNKVLMVSGTDEHGTPIQVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT   H+   + ++K + + G I+   
Sbjct: 63  KEGVSARELADRYNRVIVEDLQALGLSYDLFTRTTTDNHYAVVQEIFKGLYENGYIFPKT 122

Query: 124 YSG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ-------------- 158
             G              +         +  +G        Q +P+Q              
Sbjct: 123 TMGAISPSTARTLPDRYIEGTCPICHYDSARGDQCDNCGNQLDPIQLINPVSKINGETPI 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           ++E E +   L A+ + L S+ +S      P     +    +   L+  ++SR   DWG+
Sbjct: 183 FVETEHFMLDLPAFAEVLGSWLQSKQGEWRPNVL--KFALNLLGDLQPRAMSRD-LDWGV 239

Query: 219 KIPDD-----PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKD 266
            IP +     P   +YVW DA+  YL+ +        D    + W         + +GKD
Sbjct: 240 PIPLEGWSDQPNKRLYVWFDAVVGYLSASIEWARRSGDPDAWRQWWQSPDARGYYFMGKD 299

Query: 267 ILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FHA  WPA LL                 L LP +V S  F+  +G K S S   VI 
Sbjct: 300 NIVFHAEIWPALLLGYNGQGSRDGKPGALGTLNLPSEVVSSEFLTMEGRKFSSSRQVVIY 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +     DALRY++       +D  +       R N +L    GNLV+RS+SM  K+
Sbjct: 360 VRDFLARYDADALRYYIAVAGPESQDTDFTWSEFLNRNNGELVAAWGNLVNRSISMAAKN 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +  +IP  G  T++D ++L        +     +      A  +   ++ E +RY   Q+
Sbjct: 420 FG-VIPEAGELTDADRAMLERSRAAFAKAGAEFEASRFKNATNEAFEVIREANRYLAEQE 478

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-------------- 478
           PW++ K NP+R  ++L+V ++V+     LL   +P  +NKI+ +L               
Sbjct: 479 PWKI-KDNPERVKSILHVALQVVDDAKTLLTPVLPGSSNKIYAMLGGTGVWSGMPEIQEV 537

Query: 479 VADENRCFQSL-----------DQRLKPGFMLHKTFDPIFPRF 510
             ++ R +  +              ++PG  L     P+F + 
Sbjct: 538 TEEDGRSYPIITGSYEGAARWESTPIRPGTPL-APPTPLFTKL 579


>gi|159036379|ref|YP_001535632.1| methionyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|187647766|sp|A8M218|SYM_SALAI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157915214|gb|ABV96641.1| methionyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 600

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 142/526 (26%), Positives = 229/526 (43%), Gaps = 62/526 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GVT 
Sbjct: 8   VAWPYANGPRHIGHVSGFGVPSDVFARYMRMTGHDVLMVSGTDEHGTPIQVQADAEGVTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   D+ +R        L +SYD F RTT + H+   + L++ +   G I      G   
Sbjct: 68  RELADRYNRVIVADLHGLGLSYDLFTRTTTRNHYAVVQELFEGMYRNGYIVPKTTMGAIS 127

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P+              +++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYESARGDQCDSCGNQLDPIDLRNPKSKINGETPEFIETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A    L  + ++   +   + R ++ +      L+  +++R   +WG+ IP + 
Sbjct: 188 FFLDLPALAGVLRQWLDTREGWRPNVLRFSKNLL---DDLQPRAITRD-LEWGVPIPLEG 243

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------LHVIGKDIL 268
                   +YVW DA+  YL+ +       G      ++W AD         + +GKD +
Sbjct: 244 WRDRGDKRIYVWFDAVIGYLSASIEWARRSGDPEAWRRWWSADGQGKDAPGYYFMGKDNI 303

Query: 269 RFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH++ WPA                    + LP +V S  F+  +G K S S   VI   
Sbjct: 304 VFHSVIWPALLAGYSGEGSRDGQPGELGRMNLPTEVVSSEFLTMEGRKFSSSRRVVIYVR 363

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E    DALRYF+        D  +      +R N +L  G GNLV+RS+SM  K++ 
Sbjct: 364 DFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSISMAAKNFG 423

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            + P  P   TE+DE++L+V       + E +      +A+ + + +V+E +RY   Q P
Sbjct: 424 AIPPVDPAGLTEADEALLAVARAGFGAVGELIGRHRQKQAIGEAMKVVAEANRYLSEQAP 483

Query: 434 WELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+LK   +  R  T+L+V ++V+     LL  F+P  A KI ++L 
Sbjct: 484 WKLKSEADRPRMGTILHVALQVVSDANTLLTPFLPHSAQKIHELLG 529


>gi|78187048|ref|YP_375091.1| methionyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123771060|sp|Q3B3N3|SYM_PELLD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78166950|gb|ABB24048.1| methionyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 702

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 126/563 (22%), Positives = 236/563 (41%), Gaps = 56/563 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + ++  ++TA+ Y N   H+GH A   + AD+  R  RL G +VL   G+DEHG  I 
Sbjct: 1   MAQFKRTLVTTALPYANGPVHLGHLAGVYLPADIYVRHKRLKGEEVLHIGGSDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G++ +  VD+  R   +      IS+D + RT+ + HH+T +  + ++  KG  
Sbjct: 61  ITAEKEGISPRDVVDRYHRMNLEAFLKCGISFDCYGRTSSELHHETAQEFFLELERKGIF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE----- 163
            +     +Y      + +D  V             G   +      +P++ +  +     
Sbjct: 121 NRRTEKLFYDAEGGRFLSDRYVSGTCPICGSTEASGDQCEQCGTHLSPMELINPKSKISN 180

Query: 164 ---------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     ++F L  YQ +L  +  SH +        N   +++K GL D +++R   
Sbjct: 181 ATPELRDTLHWYFPLGRYQAELERFVNSHEDDWR-SNVLNYTRTWLKGGLNDRAITRD-L 238

Query: 215 DWGIKIPDDP----QYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVI 263
           +WGIK+P         ++YVW DA+  Y++ T       G +   + W  +     +  I
Sbjct: 239 NWGIKVPLGEAEAVGKVLYVWFDAVLGYISFTRQWAEEQGDRDLWRHWWQNPETRLVQFI 298

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH +  PA L++ N         L   V +  F+  +G K SKS    +   E 
Sbjct: 299 GKDNVVFHTLMLPAILMAWNEGREDGIYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 358

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++   D LRY +       KD  +     + R N +LA+ +GN + RS+      + G 
Sbjct: 359 LQKFPADTLRYSIAMNYPENKDTDFSWTDFQNRTNGELADTLGNFIKRSIDFTNSRFGGE 418

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P      E +   +   +    ++ +  +      A    + +    +R+  + +PW+ 
Sbjct: 419 VPHSCTVQEWEGLGIDWYA-TQSQLDQAYEGFHFREAATIAMDIARAANRFLTSAEPWKA 477

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---------ENRCFQ 487
            KT+P+ A   + +++ +   L+I L   +P+  ++I  +L             E     
Sbjct: 478 IKTDPEAAGRTMALSLNLCHALSIALYPVIPETCDRIHRMLGFKGGVDGLVRKCEPILKT 537

Query: 488 SLDQRLKPGFMLHKTFDPIFPRF 510
            L+  L  G  L    + +F + 
Sbjct: 538 LLEPALPMGHKLSPESEILFRKI 560


>gi|156841046|ref|XP_001643899.1| hypothetical protein Kpol_1067p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114528|gb|EDO16041.1| hypothetical protein Kpol_1067p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 750

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 111/543 (20%), Positives = 219/543 (40%), Gaps = 41/543 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ +R+ +    + LF  GTDE+G      A 
Sbjct: 194 RNILITSALPYVNNVPHLGNIVGSVLSADIFSRYCKTRNYNTLFICGTDEYGTATETKAL 253

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+       +     I +D F RTT ++  +  + ++ K++  G + +  
Sbjct: 254 EEGVTPRELCDKYHEIHAQVYKWFQIDFDYFGRTTTEKQTEIAQDIFLKLNKNGFLEEQS 313

Query: 124 YSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEGYF 166
               Y     ++  D           Y+ A G   +            NP   ++     
Sbjct: 314 MKQLYCPVHNSFLADRYVEGECPKCHYEDARGDQCDKCGGLLDAFELINPRCKLDNATPE 373

Query: 167 FRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + S +    L   E +                  +    S++K GL    ++R    WG
Sbjct: 374 PKFSDHIFLSLDKLEKNIADWVAKASDEGNWSKNSKTITQSWLKDGLHPRCITRD-LVWG 432

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
             +P D   + ++YVW DA   Y++ T    N      K  P ++     +GKD + FH 
Sbjct: 433 TPVPLDKYKEKVLYVWFDATIGYVSITANYTNEWQKWWKN-PDNVKLYQFMGKDNVPFHT 491

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P   +       +   + +  ++ ++G K SKS G  +      +  V     RY+L
Sbjct: 492 VIFPGSEIGTDDGWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAQDSGVSPSVWRYYL 551

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE- 388
                   D  +  D    R N++L   +GN V+R +  +   Y+G++P        +  
Sbjct: 552 ASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRIIKFVNAKYNGVVPAYDPKKLENYG 611

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTV 447
            + S   ++L      M+     R L   +SL +  +++    K    L   NPD++  V
Sbjct: 612 GLCSDIEKILNNYISEMEQAHERRGLELAMSLSARGNQFLQENKLDNTLFSQNPDKSDAV 671

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           + V + ++  +A ++  ++P+ +  I+ +L V  + R     +  ++ G  ++K  + +F
Sbjct: 672 VGVALNMVYTVASIIYPYMPETSEAIYRMLNVP-QLRIDDKFNLAIQGGHNINKA-EYLF 729

Query: 508 PRF 510
            R 
Sbjct: 730 QRI 732


>gi|50311457|ref|XP_455753.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644889|emb|CAG98461.1| KLLA0F14971p [Kluyveromyces lactis]
          Length = 568

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 170/528 (32%), Positives = 258/528 (48%), Gaps = 51/528 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K +I+T I YPNA+PH+GH Y  ++ DV  R+ +L G D  FTTG DEHG KI  AAQ  
Sbjct: 11  KFHITTPIFYPNAKPHLGHLYSSLLCDVQNRWKKLAGQDTCFTTGVDEHGLKIQLAAQQK 70

Query: 66  GVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           G +  K FVD+   +F  +    +I +  FIRTT+  H +  + LW    + G IYKG +
Sbjct: 71  GYSNPKAFVDELCEHFVHLDKDANIKFTRFIRTTDPDHVNNVKKLWNLCYNNGYIYKGEH 130

Query: 125 SGWYSLRDEAYYNDDEVYK-GADGQYYNAQ--------------HNPVQWMEEEGYFFRL 169
            GWYS+ DE +Y D ++ K   DG                     N V +  E  YFF+L
Sbjct: 131 KGWYSVSDETFYPDTKILKLTIDGPPIPYDGSFDPDAKYINSESRNEVTYQSELNYFFKL 190

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKT--FDWGIKIPDDPQY 226
           SA+Q+ L+     +P FI P  R ++++  ++S  L+D+S+SR      WGI +P+D   
Sbjct: 191 SAFQEPLIKLLRENPTFIYPPLRHSQILRELESNELRDISVSRPATRLQWGIPVPEDESQ 250

Query: 227 IMYVWIDALTNY----------------LTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
            +YVW DAL NY                        +      ++W    HVIGKDI++F
Sbjct: 251 KVYVWFDALCNYLTSIGGIDAIRNDVDSTQVLHNNRSFIEKPKEWWENTEHVIGKDIIKF 310

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H +YWPAFLL+A LPLP +V  HG  L  G K+SKSLGNV+DPI++I   G D  R++L+
Sbjct: 311 HTVYWPAFLLAAKLPLPNRVVVHGHWLSGGVKMSKSLGNVVDPIQIISYYGADTTRWYLL 370

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-----------MILKDYDGMIPT 379
                  DG + +  L +     L + +GNL++R                 K  + +   
Sbjct: 371 ENSNIESDGNFIEKNLWE-TRELLCSKLGNLINRCGGKKFSLASGVELFSGKPIEELSSV 429

Query: 380 -PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P        ++L       + +    Q   I  A   + ++++E + +  + +PW  K 
Sbjct: 430 FPKESQAEFTALLKSLDNCTESVNNCFQQYDITGAQKILWNIINEANSFIQSTEPWSKKG 489

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              D    ++Y  +E  R   I  Q  +P +A ++ + L V+ + R  
Sbjct: 490 LEKDL---IVYSAMEAARISLIFSQPIIPNIAERLLNRLDVSSDRRTL 534


>gi|302756297|ref|XP_002961572.1| hypothetical protein SELMODRAFT_164891 [Selaginella moellendorffii]
 gi|300170231|gb|EFJ36832.1| hypothetical protein SELMODRAFT_164891 [Selaginella moellendorffii]
          Length = 784

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 112/554 (20%), Positives = 220/554 (39%), Gaps = 50/554 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + +++A+ Y N  PH+G+    ++ ADV AR+ RL G ++++  GTDE+G      
Sbjct: 8   GRRNILVTSALPYVNNVPHLGNIIGSVLSADVFARYGRLRGYNIIYMCGTDEYGTATETK 67

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+     + + D  DI +D F RT+       C+ ++KK+  +  +Y+
Sbjct: 68  ALEEKTSPKEICDKYHDVHKKVYDWFDIRFDKFGRTSSPEQTVICQSIFKKLLAQDRLYE 127

Query: 122 GCYSGWY---SLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
              +          + +  D  V           +G   +      NP + +E +     
Sbjct: 128 DKINQACRLYCESCQRFLADRFVIGTCPKCGMTARGDQCEKCTHVLNPGELVEPKCKICN 187

Query: 169 LSAYQDKLLSYYESHPEFI---------------LPIERRNEVISFVKSGLKDLSLSRKT 213
            S +  +    +   P+                           ++++ GLK   ++R  
Sbjct: 188 SSPHLRETTHLFLDLPKIKNELVDYVEKTSIAGGWSSNSITITNAWIRDGLKGRCITRD- 246

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRF 270
             WG+ +P       + YVW DA   Y++ T           K    +    +GKD + F
Sbjct: 247 LKWGVPVPLPRFEDKVFYVWFDAPIGYISITANYTPEWEQWWKSEDVELFQFMGKDNVTF 306

Query: 271 HAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRY 327
           H + +P  LL         K + +  ++ ++G K SKS G  +   +  +  V V+  RY
Sbjct: 307 HTVIFPCTLLGTGERWTMMKTLSATEYLNYEGAKFSKSAGIGVFGNDAQDTNVPVEVWRY 366

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAFTE 385
           +L+       D F+    L+ + N +L   +GN V R +S + K          P A   
Sbjct: 367 YLLSIRPEAADTFFSWADLQAKQNNELLKNLGNFVHRCLSFLAKPEGQGYGSKIPDAPGA 426

Query: 386 SDES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            + +    +    S +LQ+  ++M+   +   L   +S+ S  + Y    + W L K + 
Sbjct: 427 EEHALTVKLAEEVSELLQQYVDSMEKTKLKNGLKVAMSISSLGNSYLQESEFWRLYKEDR 486

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI--------LFVADENRCFQSLDQRL 493
              + V+   + +++ LA +L+ F+P  + K+             +  +   F++    L
Sbjct: 487 PSCNIVVRTAIGLVKILATILEPFMPSFSKKVASQLGLDLSDLSLIDADVEAFRTPWVLL 546

Query: 494 KPGFMLHKTFDPIF 507
           + G ++ +     F
Sbjct: 547 RDGHVIGQPDTIFF 560


>gi|322706456|gb|EFY98036.1| methionyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 589

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 181/525 (34%), Positives = 265/525 (50%), Gaps = 47/525 (8%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           M++ADVL R+ ++ G +  F TGTDEHG KI +AA   G+  K F D  S  FR++A   
Sbjct: 1   MVLADVLKRWQQIKGKETFFLTGTDEHGMKIQRAAAKEGIAPKEFCDNYSNKFRELAAAG 60

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEV-- 141
           DIS+D FIRTT+  H +       ++         +YKG + GWY++ DE +Y +D V  
Sbjct: 61  DISHDAFIRTTDLEHKEAVSEFLLQLKHTLPEHLGLYKGTHEGWYAVSDECFYPEDLVRP 120

Query: 142 ----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
                 G      +   + V+W++EE +FF L+ Y+D LL +Y+ +P +I P  R NEV 
Sbjct: 121 DIVPQTGKKIMVSDETGSEVEWVKEETWFFPLTKYKDALLKFYDENPNWITPAHRMNEVR 180

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           ++V++ L+DLS++R      WGI  P+D    +YVW+DAL NY+T  GY      S    
Sbjct: 181 NWVENHLEDLSITRPAARLSWGIPDPEDRSQTIYVWVDALINYITQAGYGRKWHSSSDNM 240

Query: 256 --WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             WPADL +IGKDILRFHAIYWPA L++ NLPLPK++  H        K+SKSLGNV++P
Sbjct: 241 GLWPADLQIIGKDILRFHAIYWPALLMALNLPLPKQLLCHNHWTMSNRKMSKSLGNVVNP 300

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              ++   +D LRYFL+R  +  KD  Y    +      +L   IGNL+ R         
Sbjct: 301 FFAVQRWDIDPLRYFLMRNGSFTKDMSYSNQLIGSVYAKELQANIGNLLYRIAR---PKV 357

Query: 374 DGMIPTPGAFTESDE----------------SILSVCSRVLQEIRENMQNQLIHRALAQV 417
                T  A T   +                S+     ++     E M+      A+ +V
Sbjct: 358 TSKWSTLEAVTAFRQGAFEEIPDHTSQQPFVSLDDHLEKIPSAYYEEMEKYNTGGAIREV 417

Query: 418 ISLVSEVDRYFDAQKPWELKKT-NPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +L+ E +RY    +PW L K  NP      + V+Y   E +R   ILLQ  +P  A+ +
Sbjct: 418 FNLLRETNRYVSDTEPWNLVKNPNPQSRILLNLVIYNCAEALRIAGILLQPIMPTKASLL 477

Query: 474 FDILFVADENRCFQSLDQRLKPGF----------MLHKTFDPIFP 508
            + L V ++ R  +   +   P +             K +D IFP
Sbjct: 478 LNELGVREDRRTLEFASKGKDPEYGTEAQTGDSAARLKKWDTIFP 522


>gi|45658951|ref|YP_003037.1| methionyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|68565987|sp|Q72MR4|SYM_LEPIC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45602196|gb|AAS71674.1| methionyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 715

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 135/573 (23%), Positives = 231/573 (40%), Gaps = 77/573 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + +++A+ Y N   H+GH  E I  D+  RF +  G +  F    D HG  +  AA+ 
Sbjct: 8   RNILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAARK 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++  +          I YD +  T  K + +  + ++ K+  KG I +   
Sbjct: 68  EGITPEQLIERVGQEHYRDLTSFGIEYDHYDSTHSKANQEISKDIYLKLKSKGHISRRSI 127

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y   D+ +  D  +             G + +   A ++P   ++        S   
Sbjct: 128 EQSYCETDKMFLPDRFIKGTCPNCKSKDQYGDNCEVCGATYSPKDLIDSHCSLCGTSPVV 187

Query: 174 DKLLSYYESHPEFIL----------------------------------PIERRNEVISF 199
                 +    +F                                        + ++  +
Sbjct: 188 KNSDHIFFKLGDFHKKDEKSTSLETINPSHLKTDFDLQSWIETSGVVSESEGVKKKLKEW 247

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL-----TTTGYLDNPDGSKAK 254
             +GL+D  +SR    +G +IPD+     YVW+DA   Y+            N       
Sbjct: 248 FDAGLQDWDISRDGPYFGFEIPDETNKYFYVWLDAPIGYMASSKNFFEKNFPNEPNKFDS 307

Query: 255 FWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           FW       +H IGKDIL FH ++WPA L  ++   P KV  HGFI   GEK+SKS G  
Sbjct: 308 FWKNKNSEIVHFIGKDILYFHTLFWPAMLEGSDYRAPSKVHVHGFIGVNGEKMSKSRGTF 367

Query: 311 IDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           I     ++ +  + LR++L  ++     D     +    +VN+DL   + N VSR  + I
Sbjct: 368 IKAETFVKYLDPEHLRFYLASKLGPGMDDIDLSFEDFINKVNSDLVGNLINSVSRVSTTI 427

Query: 370 LKDYDGMIPTPGAFTESDESILSVC----------SRVLQEIRE-NMQNQLIHRALAQVI 418
           L   D    T G  ++   +++                +Q I +     +   + L ++ 
Sbjct: 428 LDALDR---TLGVVSKEGLALIEEILYQTVKFGPGEDSIQNIIKYAYDQRNYAKVLREIT 484

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L   V+RY +   PW+L K NP++A  V+ VT+   R LAI L   VPK++ +I+ +L 
Sbjct: 485 RLGDRVNRYVNDNAPWKLIKENPEKAREVVTVTLNASRFLAIYLYPVVPKISEQIYKLLN 544

Query: 479 VADENRCFQSLDQ-------RLKPGFMLHKTFD 504
           + D    F+ LD+       ++ P  M+ K  D
Sbjct: 545 LQDSP-SFKDLDKNRILENIKVLPYEMISKRVD 576


>gi|24216617|ref|NP_714098.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|68566008|sp|Q8EZD6|SYM_LEPIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24197948|gb|AAN51116.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 715

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 135/573 (23%), Positives = 231/573 (40%), Gaps = 77/573 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + +++A+ Y N   H+GH  E I  D+  RF +  G +  F    D HG  +  AA+ 
Sbjct: 8   RNILVTSALPYANGPIHLGHVLEGIQTDIWVRFQKAIGNECYFFCADDTHGTPVMLAARK 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++  +          I YD +  T  K + +  + ++ K+  KG I +   
Sbjct: 68  EGITPEQLIERVGQEHYRDLTSFGIEYDHYDSTHSKANQEISKDIYLKLKSKGHISRRSI 127

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y   D+ +  D  +             G + +   A ++P   ++        S   
Sbjct: 128 EQSYCETDKMFLPDRFIKGTCPNCKSKDQYGDNCEVCGATYSPKDLIDSHCSLCGTSPVV 187

Query: 174 DKLLSYYESHPEFIL----------------------------------PIERRNEVISF 199
                 +    +F                                        + ++  +
Sbjct: 188 KNSDHIFFKLGDFHKKDEKSTSLETINPSHLKTDFDLQSWIETSGVVSESEGVKKKLKEW 247

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL-----TTTGYLDNPDGSKAK 254
             +GL+D  +SR    +G +IPD+     YVW+DA   Y+            N       
Sbjct: 248 FDAGLQDWDISRDGPYFGFEIPDETNKYFYVWLDAPIGYMASSKNFFEKNFPNEPNKFDS 307

Query: 255 FWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           FW       +H IGKDIL FH ++WPA L  ++   P KV  HGFI   GEK+SKS G  
Sbjct: 308 FWKNKNSEIVHFIGKDILYFHTLFWPAMLEGSDYRAPSKVHVHGFIGVNGEKMSKSRGTF 367

Query: 311 IDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           I     ++ +  + LR++L  ++     D     +    +VN+DL   + N VSR  + I
Sbjct: 368 IKAETFVKYLDPEHLRFYLASKLGPGMDDIDLSFEDFINKVNSDLVGNLINSVSRVSTTI 427

Query: 370 LKDYDGMIPTPGAFTESDESILSVC----------SRVLQEIRE-NMQNQLIHRALAQVI 418
           L   D    T G  ++   +++                +Q I +     +   + L ++ 
Sbjct: 428 LDALDR---TLGVVSKEGLALIEEILYQTVKFGPGEDSIQNIIKYAYDQRNYAKVLREIT 484

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L   V+RY +   PW+L K NP++A  V+ VT+   R LAI L   VPK++ +I+ +L 
Sbjct: 485 RLGDRVNRYVNDNAPWKLIKENPEKAREVVTVTLNASRFLAIYLYPVVPKISEQIYKLLN 544

Query: 479 VADENRCFQSLDQ-------RLKPGFMLHKTFD 504
           + D    F+ LD+       ++ P  M+ K  D
Sbjct: 545 LQDSP-SFKDLDKNRILENIKVLPYEMISKRVD 576


>gi|254421312|ref|ZP_05035030.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188801|gb|EDX83765.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 562

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 120/518 (23%), Positives = 215/518 (41%), Gaps = 40/518 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV ARF R +G +VL+   TDEHG     AA  
Sbjct: 2   RHLITSALPYINGIKHLGNLVGSMLPADVYARFLRQEGEEVLYICATDEHGTPAEIAAVE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    F  +      D+     +S+D F RT+     +  +  ++++ ++G I +   
Sbjct: 62  EGLEVAEFCQRQYERQADIYQQFGLSFDYFGRTSSVEQKELTQYFYRRLDEQGYIEERET 121

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE-------GYF 166
           S  YS+ D+ +  D  V            +G   +      +P + +E            
Sbjct: 122 SQVYSIADQRFLPDRYVEGTCPNCGYERARGDQCENCTKLLSPTELIEPRSAISGSTNVE 181

Query: 167 FRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            R S +    L                 P   R+    ++  GL+   ++R    WG+ +
Sbjct: 182 VRASRHLFLRLDQLSDDVRRWVDAQTNWPNLTRSIAYKWLDEGLQSRGITRD-LKWGVPV 240

Query: 221 PDD--PQYIMYVWIDALTNY----LTTTGYLDNPDGSKAKFWPAD------LHVIGKDIL 268
           P +     + YVW DA   Y       +    + + +  K W  D         + KD L
Sbjct: 241 PKEGFEDKVFYVWFDAPIGYVSATKAWSDQQSDENTTDWKSWWYDADDVSYTQFMAKDNL 300

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FH I WPA +L    P      +    ++ + G K S S    +   + +E    D  R
Sbjct: 301 PFHTIMWPATILGTKEPWKMANYIKGFNWLNYYGGKFSTSSKRGVFLDQALEIAPADYWR 360

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y L+       D  +  +  + +VN +LA+  GN ++R +   +  +   +P  G   E+
Sbjct: 361 YMLMASAPESADSAFTWEQFQTKVNKELADNFGNFINRILKFTVSRFGNELPAGGEPGEA 420

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           + ++   C  ++  +R ++QN    +A   + +L S  ++Y D + PW L K + D A+ 
Sbjct: 421 EAALEKTCKEMVARLRSHLQNMEFRKATETLNALWSAGNQYIDVRAPWTLFKQDKDEAAV 480

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           V+   + +IR  AI    F+P  + ++FD L +    R
Sbjct: 481 VIRTCINLIRLYAIASSPFIPATSQQLFDALQLTKAER 518


>gi|30248639|ref|NP_840709.1| methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|68566001|sp|Q82WP0|SYM_NITEU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30180234|emb|CAD84536.1| Methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 706

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 119/551 (21%), Positives = 216/551 (39%), Gaps = 46/551 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  +   A+ 
Sbjct: 4   RNILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVYYVCADDTHGTPVMLRAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + +             I++D +  T           +++K+ + G I     
Sbjct: 64  EGISPEALIARVHAEHLRDFTGFHIAFDQYYSTHSDETRYYAEDIYRKLKEAGLIAVRAI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y      +  D  V             G   +   A + P +               
Sbjct: 124 EQLYDPIKNLFLPDRFVKGECPKCGAAEQYGDSCEACGAAYTPTELKNPYSAVSGATPVR 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
              E +FF+LS  +        +H    L  E  N++  +     ++ L D  +SR    
Sbjct: 184 KTSEHFFFKLSDSRCADFLRRWTHEGNHLQAEAANKMAEWLGEAGENKLSDWDISRDAPY 243

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP +     YVW+DA   Y+ +              +W  D      H IGKDIL 
Sbjct: 244 FGFEIPGETGKYFYVWLDAPIGYMGSFKKLCARKGIDFDAYWKKDSTTELYHFIGKDILY 303

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           FHA++WPA L +A    P ++F+HGF+   GEK+SKS G  I     +E+ +  + LRY+
Sbjct: 304 FHALFWPAMLENAGYRTPTQIFAHGFLTVNGEKMSKSRGTFITAESYLEQGLNPEWLRYY 363

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +     +D   + D    RVN+DL     N+ SR    I K + G + +   +    
Sbjct: 364 YAAKLNGSMEDIDLNLDDFVARVNSDLVGKYINIASRCAGFISKRFGGKLVSGEDYRLLQ 423

Query: 388 ESILSVCSRVLQEIRE-NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           + +    +     + E   + +    A+  ++    EV+       PWE+ +        
Sbjct: 424 QMVDEHFAGWQPGVIEAAYEARDFSAAVRHIMRRADEVNELIHELAPWEIARDETREREL 483

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-----DQRLKPGFML 499
                + +++   L+  L+  +P+ A +I D L + + +   Q       D  L PG ++
Sbjct: 484 HRACSLGIQMFYLLSCYLKPILPRTAAQIEDFLNLGELSWQKQQAGQPLSDTLLPPGHVI 543

Query: 500 HKTFDPIFPRF 510
           +  +  +  R 
Sbjct: 544 N-PYQHLMTRI 553


>gi|78189366|ref|YP_379704.1| methionyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123743436|sp|Q3AQR4|SYM_CHLCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78171565|gb|ABB28661.1| methionyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 705

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 129/563 (22%), Positives = 238/563 (42%), Gaps = 56/563 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    +  ++TA+ Y N   H+GH A   + AD+  R+ RL G D++   G+DEHG  I 
Sbjct: 4   MPHFSRTLVTTALPYANGPVHLGHLAGVYLPADLYVRYKRLKGEDIIHIGGSDEHGVPIT 63

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            +A+  G++ +  VD+      D      IS+D + RT+   HH T +  +  I  KG  
Sbjct: 64  ISAEKEGISPRDVVDRYHAMNLDAFTRCGISFDYYGRTSSAVHHATAQEFFSDIEQKGIF 123

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW--------- 159
            +     ++ L+   + +D  V             G   +      +P++          
Sbjct: 124 QQKTEKLFFDLQAGRFLSDRYVTGTCPVCNNPEANGDQCEQCGTHLSPLELLNPKSKLSD 183

Query: 160 -----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E   ++F L  +Q  L  Y  SH     P    N   ++ K GL D +++R   
Sbjct: 184 ATPELRETLHWYFPLGRFQAALEEYVNSHEGEWRP-NVVNYTRTWFKQGLNDRAITRD-L 241

Query: 215 DWGIKIP----DDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVI 263
           DWG+ +P    +    ++YVW DA+  Y++ T        +    K +  D     +H I
Sbjct: 242 DWGVAVPLQSAEAVGKVLYVWFDAVLGYISFTKEWAALQGNAELWKTYWQDPETRLIHFI 301

Query: 264 GKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           GKD + FH + +P+ L++ N         L   V +  F+  +G K SKS    +   E 
Sbjct: 302 GKDNVVFHTLMFPSILMAWNEGKTTDCYNLADNVPASEFMNFEGRKFSKSRNYAVYLGEF 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++   D LRY +       KD  +     + R N +LA+ +GN + RS+      ++G+
Sbjct: 362 LDKFPADTLRYSIAMNYPESKDTDFSWQDFQNRTNGELADTLGNFIKRSIDFTNTRFEGV 421

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P      E D   +      L+++    +      A    + +    +RY  + +PW++
Sbjct: 422 VPASVTKEEWDNLGID-WQATLEQLDSAYEGFHFRDAATLGMEIARAANRYLTSSEPWKV 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---------ENRCFQ 487
            K + + A+T + +++ +   L+I L   +P+  N+I  +L  ++          +    
Sbjct: 481 IKVDREAAATTMALSLNLCHALSIALYPVIPETCNRIRAMLGFSEPLEATIQRGTSLLSS 540

Query: 488 SLDQRLKPGFMLHKTFDPIFPRF 510
            L   L+ G  L +  + +F + 
Sbjct: 541 LLTPTLQQGHKLREHSEILFTKI 563


>gi|293607695|ref|ZP_06690026.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292813833|gb|EFF72983.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 702

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 130/554 (23%), Positives = 222/554 (40%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 17  RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 76

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   I +D +  T    +      +++ + ++  I     
Sbjct: 77  EGITPQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSHDIYRALREQNLIETRSI 136

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P + +             
Sbjct: 137 EQFYDPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYAPTELINPYSALTGATPVL 196

Query: 163 ---EGYFFRLSAYQDKLLSYYE----------SHPEFILPIERRNEVISFVKSGLKDLSL 209
              + +FF+LS  +                       +L   R        ++ L D  +
Sbjct: 197 KSSDHFFFKLSDPRCVEFLQQWTTGSNANGGKHLQPEMLAKTREWLGAEDGEAKLGDWDI 256

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNY------LTTTGYLDNPDGSKAKFWPADLHVI 263
           SR    +GI+IPD P    YVW+DA   Y            LD             +H I
Sbjct: 257 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAVKGLDFDALLDPNGTTEQVHFI 316

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P  V  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 317 GKDIVYFHALFWPAMLKFAGRKTPDAVNVHGFITVSGEKMSKSRGTGISPLRYLELGMNA 376

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + +RY++  +  A  +D  ++ +    RVN+DL     N+ SR+ S I K +DG +   G
Sbjct: 377 EWMRYYIAAKLNARVEDVDFNPEDFIARVNSDLVGKYVNIASRAASFITKHFDGALGYSG 436

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                  ++ +  +   + IR   + +  +RA+ ++++    +++ FD  +PW L K   
Sbjct: 437 DT----AALSAEYAEQAESIRAAFEAREYNRAIREIMAYADRINQAFDTAQPWVLAKGLA 492

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQ 491
                       +   ++   + L+++L   +P LA ++   LF A     +     L Q
Sbjct: 493 TADDAQKAALQDICSRSLAGFKALSVMLAPVLPSLAERVALELFGAQAPFTWADAAVLPQ 552

Query: 492 RLKPGFMLHKTFDP 505
           R+ P   L +  +P
Sbjct: 553 RVAPFKHLMQRVEP 566


>gi|330429369|gb|AEC20703.1| methionyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 690

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 136/558 (24%), Positives = 233/558 (41%), Gaps = 63/558 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             ++++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A++
Sbjct: 3   RTIFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMSGHTVHFVGADDAHGAPIMLKAES 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   I +D +  T    + +  + +++++   G I     
Sbjct: 63  EGITPQALVARYAAERPQYLNGFHIKFDHWHSTDSAENIELSQDIYRRLKAAGFIDTRTI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y      +  D  +             G   +   A + P + +             
Sbjct: 123 EQFYDPVKGMFLPDRYIKGECPRCHAKDQYGDSCESCGAVYAPTELINPYSTLTKATPVL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYE------------SHPEFILPIERRNEVISFVKSGLKDL 207
              E +FF+LS  +                             E         ++ L D 
Sbjct: 183 KSSEHFFFKLSDPRCVEFLQAWTTGSNASGNKRLQSEVLAKTREWLGTGSDDGEANLADW 242

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPAD-----LH 261
            +SR    +GI IPD P    YVW+DA   Y  +   Y      S       D     +H
Sbjct: 243 DISRDEPYFGIPIPDAPGKYFYVWLDAPVGYLASLKAYCAKQGLSFDDLIAPDSNTEQVH 302

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEV 320
            IGKDI+ FHA++WPA L  +    P  +  HGFI   GEK+SKS G  I P+  +   +
Sbjct: 303 FIGKDIVYFHALFWPAMLKFSGKKTPDGLHVHGFITVSGEKMSKSRGTGISPLRYLDIGM 362

Query: 321 GVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + +RY++  ++    +D  ++ D    RVN+DL     N+ SR+ + I K +DG +  
Sbjct: 363 NAEWMRYYIAAKLNAHVEDLDFNPDDFIARVNSDLIGKYVNIASRAANFISKHFDGQLGY 422

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK- 438
               T  ++ +L    +V +++R + +N+   RA+ QV++    +++ FDA +PW L K 
Sbjct: 423 QADTTALEQELL----QVTEQVRSSFENREYGRAVRQVMAQADLINQAFDAAQPWVLAKG 478

Query: 439 ----TNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-- 490
               ++  +A    +    +   + L+++L   +P L  K+   LF  D+   FQ  D  
Sbjct: 479 IGSASDEQKALLQDICSRALAGFKALSVMLTPVLPVLTEKVARELF--DQGALFQWADAA 536

Query: 491 ---QRLKPGFMLHKTFDP 505
              QR+ P   L +  +P
Sbjct: 537 KLPQRIAPFKHLMQRVEP 554


>gi|228923768|ref|ZP_04087046.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835897|gb|EEM81260.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 544

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 128/539 (23%), Positives = 236/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F+     L  +YD +  T  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTAKEIANKYHEEFQRCFHDLGFTYDCYTHTASEHHHETVQNVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + + +     G   + +        +V GKD + FH++ W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDSEAKTYYVHGKDNIPFHSVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL       P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEGASPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K Y G++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYGGIVPKGSIEVE----LKDKV 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ +P     ++Y  V +
Sbjct: 418 EGLYKYVGEAIEQTQFKVALETIFDAVRFANKYFDEKQPWKQREDDPVSCEEMIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPSRIDSVQPLFERI 527


>gi|94676991|ref|YP_588839.1| methionyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988114|sp|Q1LT75|SYM_BAUCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|94220141|gb|ABF14300.1| methionyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 547

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 128/533 (24%), Positives = 223/533 (41%), Gaps = 38/533 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ ++ A+ Y N   H+GH  E I AD+  R+ R+ G  V F    D HG  I   A+ +
Sbjct: 7   KILVTCALPYANGSLHLGHMLEHIQADIWVRYQRIRGKQVYFICADDAHGTPIMLKAKQS 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +  +++ ++  +      +ISYD++  T    + +    ++  + + G I K   S
Sbjct: 67  GITPEAMINKINQEHQTDLAQFEISYDNYYSTHSDENRELVISIYNTLKENGLIKKRMIS 126

Query: 126 GWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
             Y      +  D  V             G + +   A ++P   ++ +     ++    
Sbjct: 127 QLYDPIHNIFLPDRFVKGYCPRCKLPDQYGDNCEICGATYHPTDLIDPKSTLSGVTPVIS 186

Query: 175 KLLSYYESHPEFI-----------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           K    +   P F            L  +  N++  +   GL+   +SR    +G ++PD 
Sbjct: 187 KSKHLFFDLPVFSEVLRAWTRSGALQEQVANKMQEWFDMGLQQWDISRDAPYFGFEVPDT 246

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFW----PADL-HVIGKDILRFHAIYWP 276
           P    YVW+DA   Y+     L N        +FW     ADL H IGKDI  FH I+WP
Sbjct: 247 PGKYFYVWLDAPIGYIGAFKNLCNKRNDIIFDEFWHLSSKADLYHFIGKDITYFHGIFWP 306

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A L  + L  P  +F HG++   G K+SKS G +I     +  +    LRY+   +++  
Sbjct: 307 AILEGSKLRKPTNLFVHGYVTINGAKMSKSRGTLIKASTYLAHLDASYLRYYYATKLSSD 366

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             D   + +    RVNAD+ N + NL +R+ S I K +D  +      T  D+ +     
Sbjct: 367 INDIDLNFNDFVNRVNADIINKVINLAARNASFIQKYFDNKLSA----TIEDQYLYDYFV 422

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVE 453
                I E   N+   RA+ +++ L    + Y   ++PW + K          +  + + 
Sbjct: 423 TASVSIGEAFNNRETSRAIREIMILADRANVYIHKKEPWVVAKNKYYQQDLHNICSMGIN 482

Query: 454 VIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLHKTFD 504
           + R L   LQ  +P LA +    L   +  ++      + ++ P   L +   
Sbjct: 483 LFRLLMTYLQPVLPNLAIQAEAFLNTKLNWDSMVIPLTNHKISPFKTLLQRIT 535


>gi|300717549|ref|YP_003742352.1| Methionyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299063385|emb|CAX60505.1| Methionyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 668

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 127/521 (24%), Positives = 218/521 (41%), Gaps = 47/521 (9%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ R+ G  V F    D HG  I   AQ  G+  +  + + S+  +   
Sbjct: 1   MLEHIQADIWVRYQRMRGNQVYFICADDAHGTPIMLKAQQLGIAPEQMIAEMSQEHQTDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141
              DISYD++  T    + +   +++ ++ + G I     S  Y      +  D  V   
Sbjct: 61  AGFDISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGT 120

Query: 142 --------YKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                     G + +   A ++P +                + E YFF L  +   L ++
Sbjct: 121 CPKCKSPDQYGDNCEVCGATYSPTELINPQSVVSGATPVMRDSEHYFFDLPEFSAMLQAW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  +  N++  + +SGL+   +SR    +G +IP  P    YVW+DA   Y+
Sbjct: 181 TRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYM 237

Query: 240 TTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +   L +         FW  D      H IGKDI+ FH+++WPA L  +N   P  +F 
Sbjct: 238 GSFKNLCDKRGDIDFDAFWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFV 297

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVN 351
           HG++   G K+SKS G  I     ++ +  D+LRY+   +++    D   + +   +RVN
Sbjct: 298 HGYVTVNGAKMSKSRGTFIKASTWLQHLDADSLRYYYAAKLSSRIDDIDLNLEDFVQRVN 357

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           AD+ N + NL SR+   I K +DG +        +D  +    +     I E   ++   
Sbjct: 358 ADIVNKVVNLASRNAGFINKRFDGKLSA----ELADPELYKTFTDASASIGEAWNSREFG 413

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           RA+ ++++L    +RY D Q PW + K          +  + + + R L   L+  +P L
Sbjct: 414 RAVREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINMFRVLMTWLKPVLPSL 473

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +    L V      +  + Q L     +   F  ++ R 
Sbjct: 474 TERTEAFLNVE---MSWDGIQQPLL-DHKISA-FKALYSRI 509


>gi|145593338|ref|YP_001157635.1| methionyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|187647767|sp|A4X307|SYM_SALTO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145302675|gb|ABP53257.1| methionyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 603

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 142/526 (26%), Positives = 223/526 (42%), Gaps = 62/526 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GVT 
Sbjct: 11  VAWPYANGPRHIGHVSGFGVPSDVFARYMRMAGHDVLMVSGTDEHGTPIQVQADAEGVTP 70

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   D+ +R        L ++YD F RTT   H+   + L++ +   G I      G   
Sbjct: 71  RELADRYNRVIVADLHGLGLTYDLFTRTTTGNHYAVVQELFEGMYRNGYIVSKTTMGAIS 130

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEG 164
                      +         E  +G        Q +P+               ++E E 
Sbjct: 131 PSTGRTLPDRYIEGTCPICGYESARGDQCDSCGNQLDPIDLRNPKSKINGETPKFVETEH 190

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A    L  + ++   +   + R ++ +      L+  +++R   +WG+ IP D 
Sbjct: 191 FFLDLPALAGVLGQWLDTREGWRPNVLRFSKNLL---DDLQPRAITRD-LEWGVPIPLDG 246

Query: 224 ----PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD--------LHVIGKDIL 268
                   +YVW DA+  Y               +  ++W AD         + +GKD +
Sbjct: 247 WRERGDKRIYVWFDAVIGYLSASIEWARRSGDPQAWRRWWSADGPGKDAPSHYFMGKDNI 306

Query: 269 RFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH++ WPA                    L LP +V S  F+  +G K S S   VI   
Sbjct: 307 VFHSVIWPALLAGYSGEGSHDGQPGELGRLNLPTEVVSSEFLTMEGRKFSSSRRVVIYVR 366

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E    DALRYF+        D  +      +R N +L  G GNLV+RS+SM  K++ 
Sbjct: 367 DFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSISMAAKNFG 426

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            + P  P   TE+DE++L+V       + E +      +A+ + + +V+E +RY   Q P
Sbjct: 427 AIPPVDPAGLTEADETLLAVARAGFDTVGELIGRHRQKQAIGEAMKVVAEANRYLSEQAP 486

Query: 434 WELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+LK   +  R  TVL+V ++V+     LL  F+P  A KI  +L 
Sbjct: 487 WKLKGEADRPRMGTVLHVALQVVSDANTLLTPFLPHSAQKIHQLLG 532


>gi|159045247|ref|YP_001534041.1| methionyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|187647718|sp|A8LIJ9|SYM_DINSH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157913007|gb|ABV94440.1| methionyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 572

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 120/555 (21%), Positives = 229/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D F R++ +R+    +    K+++ G I +   
Sbjct: 63  AGKPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEEVSE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D          G D    +   N                       +
Sbjct: 123 KQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 VRETKHLYLRQSALKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD-------- 259
            +             + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGADEVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN  SR        Y   +
Sbjct: 362 EILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSKYGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA+  ++E++++  +  L+    +M    + +A A++ ++    + Y  A  PW + 
Sbjct: 422 PAGGAYGPAEEALIAELTTKLRAYEGHMDAMEVRKAAAELRAIWVAGNEYLQAAAPWSVF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           KT+PD A+ ++ + + ++R  A+L Q F+P  +  +   +   D             L  
Sbjct: 482 KTDPDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAMKAEDAGWPGDVAEALAALPA 541

Query: 496 GFMLHKTFDPIFPRF 510
           G       +  F + 
Sbjct: 542 GHAF-AVPEVTFAKI 555


>gi|312374412|gb|EFR21973.1| hypothetical protein AND_15967 [Anopheles darlingi]
          Length = 1133

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 217/550 (39%), Gaps = 54/550 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   I++A+ Y N  PH+G+    ++ AD+ AR+ RL G + L+  GTDE+G      
Sbjct: 413 GQKNNLITSALPYVNNVPHLGNIVGCVLSADIFARYSRLCGYNTLYIGGTDEYGTATETK 472

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    +T +   D+       +     I +D F RTT        + L+ ++  KG I  
Sbjct: 473 ALAENMTPRQICDKYFDIHNSIYRWFGIGFDYFGRTTTTEQTRIVQELFGELYAKGYIET 532

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
                    + + Y  D  V              +G          N ++ +        
Sbjct: 533 RAVEQLLCTKCDRYLADRFVEGTCPHPGCGYEDARGDQCDGCGKLVNAIELLRPRCKVCN 592

Query: 169 LSAY----------QDKLLSYYESHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFD 215
            S              K+     +  +   P    N  +   S++K GLK   ++R    
Sbjct: 593 SSPIMRESNQFFLDLPKIEPELRAWIDRSDPGWTHNARVITRSWLKEGLKSRCITRD-LK 651

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKD 266
           WGI +P +   + + YVW DA   Y++ T           +   A+          + KD
Sbjct: 652 WGIPVPVEGYEKKVFYVWFDAPIGYISITSRYCKEWKQWWQPDTANTGVKVDLYQFMAKD 711

Query: 267 ILRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FH++ +PA LL  +    L   + +  ++ ++  K SKS G  +   +  +  +  D
Sbjct: 712 NVPFHSVMFPASLLAVNQGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQDTGIPAD 771

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             R++L      G+D  +    L+ R N +L   +GN V+R++    K +D  IP P   
Sbjct: 772 VWRFYLGASRPEGQDSSFSWSDLQARNNNELLKNLGNFVNRALVFCEKFFDSTIP-PMTL 830

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPD 442
            E D ++L++ +R L+     M+   +   +  ++ +    +++   ++PW ++K T+  
Sbjct: 831 IEDDYTLLALANRELKGYVHQMEKARMRDGIRHMLQISRYGNQFMQNEEPWVKVKGTDEQ 890

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
           +A             LA L+  F+P  A  ++  L V     N     L   L  G  + 
Sbjct: 891 KARA---------GLLATLIFPFMPATARNLYSQLNVRGGYINADKPLLRTVLPSGHRIG 941

Query: 501 KTFDPIFPRF 510
           K    +F + 
Sbjct: 942 KPA-VLFSKI 950


>gi|312199898|ref|YP_004019959.1| methionyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311231234|gb|ADP84089.1| methionyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 580

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 138/517 (26%), Positives = 229/517 (44%), Gaps = 44/517 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
               ++ A  Y N  PH+GH A   + AD+ AR+ R+ G  VL  +G+D HG  I   A+
Sbjct: 29  RPTLVAVAWPYANGAPHLGHIAGAYLPADIFARYQRMAGRRVLMVSGSDAHGTPITVRAE 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +  VD+    F D+ + L IS+D F  T    H    + ++ ++   G I    
Sbjct: 89  EEGITPQQVVDRYHPIFLDIWERLGISFDLFTSTRTDNHTAVTQDVFTRLRAAGYISVQE 148

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE--------- 163
            + +Y  +   +  D  V            +G   +      +P Q +E           
Sbjct: 149 TTQFYDPQAGRFLPDRYVVGTCPHCAYPSARGDQCENCGRTLDPDQLIEPRSKMTGAVPE 208

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 +F  LS  ++ LL++ E+   +       N  + FVK GL D +++R   DWG+
Sbjct: 209 QRRTSHFFLDLSKLEEPLLAWLETRTGWR--RHVINWSLQFVKDGLHDRAITRD-LDWGV 265

Query: 219 KIPDD---PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPAD-----LHVIGKDI 267
            +P D   P   +YVW +A+  YL+ +              + W  +      + +GKD 
Sbjct: 266 PLPTDELGPGKRIYVWFEAVIGYLSASKEWAATIAGAPEAWRDWWENPDAAAYYFVGKDN 325

Query: 268 LRFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           + FH + WPA LL    L LP  V ++ ++   G K SKS G      E +E +  DALR
Sbjct: 326 IPFHTVIWPAMLLGYGGLDLPTDVPANQYVTFGGAKASKSAGIGRSVPEYLEVLQPDALR 385

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAF 383
           Y L   +    D       + +RVN +L    GNLV+R ++ I K +DG++P    P   
Sbjct: 386 YALATVLPEQNDTEISDGDIIRRVNDELIANWGNLVNRVMAQINKFFDGVLPDVPSPEEL 445

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             S   +L+     L    E ++   +  AL   +    EV++Y   ++PW+  K + D 
Sbjct: 446 GGSHAELLAKVDEGLARTAELLEKVELRAALRAAMEASGEVNQYLYREEPWKTVKVDRDA 505

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           A+  L  +++ I  +A+ L  F+P    ++ D+L V 
Sbjct: 506 AARSLATSIQAIAGIAVALAPFLPFSTERLQDVLGVD 542


>gi|315644563|ref|ZP_07897695.1| methionyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280070|gb|EFU43367.1| methionyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 546

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 220/539 (40%), Gaps = 46/539 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   
Sbjct: 3   NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGEQVLYVSGSDCHGTPVAVQAIQE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GVT +   D+    F    + L  SYD + RT ++ HH   + L+ K+ D G +Y+    
Sbjct: 63  GVTPRDIADRYHGEFAKCFEQLGFSYDLYTRTDQEFHHGVVQELFLKLLDNGYLYRKTIQ 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWME 161
             Y   D  +  D  V                                     NP     
Sbjct: 123 QTYCETDRRFLPDRYVEGDCPVCGSRARGDQCDVCSTLLDPSDLSNRACKICGNPPVERP 182

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            E Y+  LS +Q +L     +   +            +++ GL D + +R    WG  + 
Sbjct: 183 TEHYYVSLSHFQAELTDDLNNAKGWR--ENAIQLTRRYLEEGLVDRAATRD-LTWGVDVP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-------ADLHVIGKDILRFHA 272
           +P      +YVWI+A++ YL+ +       G   + +           +V GKD + FH 
Sbjct: 240 VPGFEDKKIYVWIEAVSGYLSASKQWAAETGGDWESFWLKEREDITAYYVHGKDNIPFHT 299

Query: 273 IYWPA-FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + WPA    +  L +P ++ S  ++  +G+K S S    I   +++     D++RYFL+ 
Sbjct: 300 LIWPALLKGAGGLHVPDRIISCEYMTLEGKKFSTSRNWAIWVPDLLSRYQPDSIRYFLIA 359

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +         N +L    GNLV+R++  + K +DG +P      E      
Sbjct: 360 NGPEKRDTDFSWREFIHSHNGELLGAFGNLVNRTLVFVNKSFDGKVPEGRITEEWQR--- 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                + +E    ++   +  AL  + S V   ++YFD +KPW   K + +     L+  
Sbjct: 417 -RMESLYREAGTLIEEGRLKEALELIFSTVRHANKYFDERKPWIQVKEDREACGDTLFTC 475

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           V++I  L  LLQ F+P   +KI   L +      + ++      G  LH   + +F R 
Sbjct: 476 VQIIANLTNLLQPFIPFSCDKIRGFLSLKPAAWNWCNV----PAGERLHH-VELLFERI 529


>gi|171741863|ref|ZP_02917670.1| hypothetical protein BIFDEN_00959 [Bifidobacterium dentium ATCC
           27678]
 gi|171277477|gb|EDT45138.1| hypothetical protein BIFDEN_00959 [Bifidobacterium dentium ATCC
           27678]
          Length = 620

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 144/544 (26%), Positives = 237/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + L+ +  + G IYKG   
Sbjct: 64  GVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        G+DG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   E     +     GL      R   +  DWGI IP   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPIPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPA----DLHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +       G       +W A      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRAWWNAPTTPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILS 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K++  +  
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T+ D ++L+  +     I   ++N     AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEASMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K NP R  TVL+V  + +     LL  F+P  A K+++ L           L++     K
Sbjct: 483 KDNPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGFM
Sbjct: 543 PGFM 546


>gi|307611755|emb|CBX01463.1| methionyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 664

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 134/537 (24%), Positives = 228/537 (42%), Gaps = 45/537 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I   A+  G
Sbjct: 1   MLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIMLKAEQLG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +    +   +         I YD +  T    +      +++++   GDI K     
Sbjct: 61  ITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIVKKTIRQ 120

Query: 127 WYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------------E 161
           +Y    + +  D  V             G + +   A ++P   +              E
Sbjct: 121 FYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGASPVEKE 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    +G  IP
Sbjct: 181 SEHYFFDLPRYEELLKDWTRKG---HLQTEVTNKLSEWFEAGLKQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFW-----PADLHVIGKDILRFHAIYW 275
             P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ FHA++W
Sbjct: 238 GVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVYFHALFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IA 334
           PA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+   +   
Sbjct: 298 PAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYFAAKLNG 357

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + D    RVNADL   + N+ SR    I K +D  + +     +    +LS  
Sbjct: 358 RVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSSELNDPKLHNDLLS-- 415

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTV 452
               + + +   ++   RA+ Q++    +V++Y DA KPW L K          +  + +
Sbjct: 416 --ARESVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHAICTMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + R L   L+  +P +A    + L    E   + S+D+ L        TF P+  R
Sbjct: 474 NLFRILITYLKPVLPMMAKASEEFLN--SEPLHWGSIDKPLL--NHRINTFKPLMVR 526


>gi|163848994|ref|YP_001637038.1| methionyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526954|ref|YP_002571425.1| methionyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|187647712|sp|A9WKM1|SYM_CHLAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782859|sp|B9LDY3|SYM_CHLSY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|163670283|gb|ABY36649.1| methionyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450833|gb|ACM55099.1| methionyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 600

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 135/532 (25%), Positives = 231/532 (43%), Gaps = 60/532 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + AD+ AR+HRL G  VL  +GTDEHG  I   A 
Sbjct: 3   EHILVAVAWPYANGPRHIGHVAGFGVPADIFARYHRLRGNHVLMISGTDEHGTPITLVAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D+ ++   D    L +SYD F RTT   H+   + +++ + ++G I +  
Sbjct: 63  KEGTTPQAIADRYNKIIGDDLYNLGLSYDIFTRTTTANHYAVTQDIFRTLYERGYIIRQE 122

Query: 124 YSG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE---------- 162
             G              +         +  +G       +Q +P   +            
Sbjct: 123 TLGAFSATTGRTLPDRYIEGTCPICGYDEARGDQCDNCGSQLDPTDLINPRSKVDGQPPV 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +F  L A+ ++L ++ +    +      RN  ++F+K  LK  +++R   +WG+
Sbjct: 183 FKPTEHFFLDLPAFAEQLHAWIDRQTHWR--PNVRNFSLNFLKE-LKPRAITRD-LEWGV 238

Query: 219 KIP-----DDPQYIMYVWIDALTNY-----LTTTGYLDNPDGSKAKFWPA--DLHVIGKD 266
            IP           +YVW DA+  Y                       PA    + +GKD
Sbjct: 239 PIPLPEYVHRDDKKIYVWFDAVIGYLSASIEWARNSGQPDAWRTWWQNPAARHFYFMGKD 298

Query: 267 ILRFHAIYWPAFLLSAN-----------------LPLPKKVFSHGFILHKGEKISKSLGN 309
            + FH + WPA LL                    L LP  V S  F+  +G+K S S G 
Sbjct: 299 NIVFHTVIWPAMLLGYGAGGDFGTDPSGTYQGVPLQLPYNVVSSEFLTMEGKKFSSSRGI 358

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + +     DALRYFL       +D  +      +R N +L    GNLV+R+++ +
Sbjct: 359 VIYVNDFLSRYDADALRYFLTIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLTNV 418

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++   +P PG  T +DE ++   +  L+ + + +       AL++ + L ++V+ Y  
Sbjct: 419 YKNFG-SVPQPGPLTATDEQLIQEVNGGLETVGDLLATARFKAALSEAMRLAAQVNIYLS 477

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            Q+PW++ K++ +RA+T+ YV +  +  L I+   F+P  + ++ + L    
Sbjct: 478 EQEPWKVIKSDRERAATIWYVALRCVDTLKIIFTPFLPFSSQRLHEYLGYDG 529


>gi|296128709|ref|YP_003635959.1| methionyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020524|gb|ADG73760.1| methionyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 595

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 152/582 (26%), Positives = 242/582 (41%), Gaps = 81/582 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  + A  Y N   HIGH     I +DV +R+ R+ G DVL  +GTDEHG  I   A  
Sbjct: 3   RILSAVAWPYANGPRHIGHVAGFGIPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVQADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D+ +R   +    L +SYD F RTT + H+   + +++ +   G + +   
Sbjct: 63  EGVSAQELADRYNRVIVEDLTQLGLSYDLFTRTTTRNHYAVVQEMFRTVHRNGYMVERTT 122

Query: 125 SGWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFF 167
            G  S          Y        G DG   +               NP   +  E   F
Sbjct: 123 MGAVSPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAIELKNPRSRINGETPRF 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP- 221
             S +    L  +       L   R     + +K  L  L   R        DWGI +P 
Sbjct: 183 VESNHFFLDLPAFVDALGDWL-RARDGWRPNVLKFSLNLLDDVRPRAMTRDIDWGIPVPL 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
               D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + F
Sbjct: 242 EGWEDNPSKRLYVWFDAVIGYLSASIEWARRSGDPDAWRQWWNDPEALSYYFMGKDNITF 301

Query: 271 HAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WPA LL                +L LP +V S  F+  +G++ S S G VI   ++
Sbjct: 302 HSQIWPAELLGYDGKGARGGEPGAFGSLNLPTEVVSSEFLNVEGKQFSTSRGVVILVRDM 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +     DALRY++       +D  +     K+R N +L  G GNLV+R+ SM+ K++   
Sbjct: 362 LARYQPDALRYYISVAGPETQDVDFTWAEFKRRTNDELVAGWGNLVNRTASMVHKNFG-E 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           IPTPG     D  + +  +     + E +      +AL + + +V+E +RY    +PW+L
Sbjct: 421 IPTPGELQPVDVELNAQVAAAFGRVGELVGAHRQRQALQEAMRVVTEANRYVSETEPWKL 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----------------VA 480
            KT+ DR +TVL+ T + +  L  LL  F+P  A  + + L                 + 
Sbjct: 481 -KTDRDRLATVLHTTTQAVSDLNTLLAPFLPHSAQAVHEALGGTGTFSPQPRIEEVADLD 539

Query: 481 DENRCFQSLDQ------------RLKPGFMLHKTFDPIFPRF 510
           D++R +  +               + PG  + K   P+F + 
Sbjct: 540 DDSRHYPVITGDYTAVRGTWQPRAVVPGTRIDKP-TPVFTKL 580


>gi|229118509|ref|ZP_04247863.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228665079|gb|EEL20567.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 544

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 236/539 (43%), Gaps = 49/539 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPITIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT     D+    F      L  +YD + RT  + HH+T + ++ ++ ++G IYK     
Sbjct: 63  VTVVEIADKYHEEFERCFHSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCKLCGSTPSVQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   ++R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQVKRDVEIAKQTGAWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD--PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYW 275
            +      +YVWI+A+T Y + +  + +       +FW       +V GKD + FH+I W
Sbjct: 242 VEGYEDKKIYVWIEAVTGYYSASKHWAEKTGKDDQEFWDKETKTYYVHGKDNIPFHSIIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 302 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILESYDPDSIRYFLTVNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K YDG++P      E    +    
Sbjct: 362 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGVVPKGTIHVE----LKEKI 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   + E+++      AL  +   V   ++YFD ++PW+ ++ +P      +Y  V +
Sbjct: 418 EGLYINVGESIEQTKFKVALETLFDAVRFANKYFDEKQPWKQREDDPVSCEETIYNCVYL 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++ + L +   N          +P   L    D   P+F R 
Sbjct: 478 IANFANLLEPFLPFSSERVRNTLSIVKRNW---------EPQNTLPNRIDSVQPLFERI 527


>gi|254465029|ref|ZP_05078440.1| methionyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685937|gb|EDZ46419.1| methionyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 575

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 113/562 (20%), Positives = 230/562 (40%), Gaps = 56/562 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    ++ I++AI Y N   H+G+     + AD+ ARF R  G +V+F   TDEHG    
Sbjct: 1   MDGMARILITSAIPYINGIKHLGNLVGSQLPADLYARFQRGRGNEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  A      +  +      ++A    +S+D F R++  ++H   +    K+++ G I
Sbjct: 61  LAAAKADKPVAEYCAEMHAIQAEIAKGFALSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV----------- 157
            +      YS  D  +  D  +            +G   +    Q +P            
Sbjct: 121 REVTEKQVYSNADGRFLPDRYIEGTCPNCGYERARGDQCEECTKQLDPTDLINPRSAVSG 180

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               +  E +  +   S  +D+L ++ +S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLCQSQLKDQLDAWIDSKKDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKIPDDPQ-------YIMYVWIDALTNYLTTTGYLD----NPDGSKAKFWPAD--- 259
            DWG+ +    +        + YVW DA   Y+            PD    ++W  D   
Sbjct: 240 LDWGVPVKKGDEDWPGMEGKVFYVWFDAPIEYIACAKEWADASGRPDADWQRWWRTDKGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  + 
Sbjct: 300 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P  G +   +++++   +  ++    +M+   + ++  ++ ++    + Y  +  
Sbjct: 420 FGEEVPAGGEYGPQEQALIDELTTRIRAYEGHMEAMEVRKSSQELRAIWVAGNEYLQSAA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           PW + K +P+RA+  + + + +IR  A+L   F+P   + +   L   D +    +    
Sbjct: 480 PWSVFKEDPERAAAQVRLGLNLIRLYAVLSAPFIPHATDTLMAALNSDDRSWPEDAAAAL 539

Query: 493 LKP----GFMLHKTFDPIFPRF 510
                  GF +    + +F + 
Sbjct: 540 SALPAGHGFTV---PEVLFAKI 558


>gi|224098226|ref|XP_002194925.1| PREDICTED: similar to rCG22562 [Taeniopygia guttata]
          Length = 706

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 163/497 (32%), Positives = 254/497 (51%), Gaps = 38/497 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            +GTDEHG KI +AA  AG       ++ S  FR       ++Y DF RT+E RH     
Sbjct: 129 VSGTDEHGLKIQQAAAAAGTEPAELCERVSGLFRQALTQAGVAYTDFTRTSEPRHRRAVG 188

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPVQWMEE 162
             W  + D G +YKG Y GWY   +E++  + ++ +G D      +      + V W +E
Sbjct: 189 HFWGALRDGGVLYKGSYEGWYCTPEESFLPESQLAEGTDAQGRPCKVSLETGHEVHWTKE 248

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKI 220
           E Y FRLSA++D L ++   +P  I P      V+ ++   L DLS+SR      WGI +
Sbjct: 249 ENYMFRLSAFRDPLQNWLRDNPRAIFPDPFYQCVLRWLDEDLPDLSVSRERNRLQWGIPV 308

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
           P+DP   +YVW+DAL NYL+  GY ++     + +WPA  HV+GKDIL+FHA+YWPA LL
Sbjct: 309 PNDPTQTIYVWVDALVNYLSVVGYPESH----SAWWPAVHHVVGKDILKFHALYWPALLL 364

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +A L  P+++  H     +G+K+SKSLGNV+DP   + + GVD  RYFL+R+    +D  
Sbjct: 365 AAGLEPPERILVHSHWTVRGQKMSKSLGNVVDPSVCVGQYGVDGFRYFLLRQGVPERDCD 424

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMIL-------KDYDGMIPTPGAFTES------- 386
           Y  + + K VN++LA+ +G L++RS +  +       +  +   P      E+       
Sbjct: 425 YYDEKVMKLVNSELADALGGLLNRSTASSINPSNTYPRFSEPCFPKVLDSREARGTGRAC 484

Query: 387 --DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR- 443
             D  +++  + +  ++    +   I++AL  +   V + + +F   KPW+L + +    
Sbjct: 485 VEDYKLVAAVASLPAQVDSYFEGFQIYKALECIAQCVRQTNGFFQRHKPWKLDRRDAAEQ 544

Query: 444 --ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL------DQRLKP 495
               T+L+VT+E +R    LLQ  VP  A+K+   L V    R    L      D +  P
Sbjct: 545 LWLDTILHVTLECLRVYGTLLQPVVPHTADKLLSRLAVGPGERDLSGLTFLARYDGKPCP 604

Query: 496 --GFMLHKTFDPIFPRF 510
             G  L      +F R 
Sbjct: 605 FEGRQLGPDTGILFHRL 621


>gi|254583406|ref|XP_002497271.1| ZYRO0F01716p [Zygosaccharomyces rouxii]
 gi|238940164|emb|CAR28338.1| ZYRO0F01716p [Zygosaccharomyces rouxii]
          Length = 552

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 171/509 (33%), Positives = 270/509 (53%), Gaps = 36/509 (7%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV- 67
           ++T I YPNA+PH+GH Y  +I DV  R+  L G + LFTTGTDEHG KI  A++  G  
Sbjct: 16  VTTPIFYPNAKPHLGHLYSSLICDVFHRWKTLQGEENLFTTGTDEHGLKIQLASERNGFQ 75

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K FVD+   +F  +    ++++  FIRTT+  H +  R LW      G IY+G + GW
Sbjct: 76  NPKQFVDKLYDDFITLDKAFNVNFTRFIRTTDTDHINNVRKLWNLCDKNGFIYQGEHKGW 135

Query: 128 YSLRDEAYYNDD---EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           YS+ DE +Y +    E             +N V +  E+ +FF+LS + D+L+ Y ES+P
Sbjct: 136 YSISDETFYPESKVIEDPVNTGKYLNTETNNEVVYHSEKNHFFKLSHFNDQLIDYIESNP 195

Query: 185 EFILPIERRNEVISFVKSG-LKDLSLSRKTFD--WGIKIPDDPQYIMYVWIDALTNY--- 238
           +FI P  +R ++++ +++  L+DLS+SR +F   WGI +P DP   MYVW DAL NY   
Sbjct: 196 QFIYPEVKRVQILNELRNNRLQDLSISRPSFRLKWGIDVPGDPSQKMYVWFDALCNYLTS 255

Query: 239 ------------LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
                        T   +      S   +W    HVIGKDI+RFH IYWP+FL++A LPL
Sbjct: 256 IGGIDAIMNNEPHTKLLHTRKEIQSPRDWWSNTTHVIGKDIIRFHTIYWPSFLMAAGLPL 315

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P++V  H   +  G K+SKSLGNV+DP+ + +  G D +R+FL+      +DG + +  L
Sbjct: 316 PRQVVVHSHWICNGMKMSKSLGNVVDPLLMKKHYGEDPMRWFLLENSQLEEDGDFQESKL 375

Query: 347 KKRVNADLANGIGNLVSRSVS---MILKDYDGMIPTPGAFTESDESILSVCSRVLQE--- 400
              +    A+  GNLV+R       + +              +D+++ +  + ++++   
Sbjct: 376 -FSLTEMFASKWGNLVNRCCGPKFNLQRAVQFYSDGRNPLLVNDDNLQAEVNNLVKKLSN 434

Query: 401 ----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
               + + M N     AL  V S++++ + +    +PW      P     ++++ +E  R
Sbjct: 435 IPISMDKKMNNFQTASALRDVWSIINDTNAFMQNAEPWT---KGPAEQDAIIFLCMETSR 491

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L+IL Q  +P LA K+ D + V  +NR 
Sbjct: 492 ILSILCQPIIPDLAAKLLDRIDVEKDNRT 520


>gi|50302967|ref|XP_451421.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640552|emb|CAH03009.1| KLLA0A09647p [Kluyveromyces lactis]
          Length = 777

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 113/546 (20%), Positives = 218/546 (39%), Gaps = 41/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    + I++A+ Y N  PH+G+    ++ AD+ +RF +    + L+  GTDE+G     
Sbjct: 219 EGERNILITSALPYVNNVPHLGNIVGSVLSADIYSRFAKGRNYNALYICGTDEYGTATET 278

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +   D+  +   D+     I +D F RTT ++     + ++ K+ D+G + 
Sbjct: 279 KALEDGVTPRELCDKYHKVHSDVYKWFQIGFDYFGRTTTEKQTAIAQDIFMKLYDRGFLE 338

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +      Y    + Y  D  V            +G       A  NP + ++        
Sbjct: 339 EQTMKQLYCPAHKGYLADRYVEGTCPKCGYEDARGDQCDKCGALLNPFELIDPRCKLDDG 398

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R S +    L   E   +                +    S++K GL    ++R   
Sbjct: 399 VPEPRDSDHIFMSLDKLEPEIKKWVDEASSKGNWSKNSKTITQSWLKEGLHPRCITRD-L 457

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + + +  + ++YVW DA   Y++ T    N      K  P ++     +GKD + 
Sbjct: 458 VWGTPVPLENYKEKVLYVWFDACIGYVSITANYTNKWEQWWKN-PNNIDLYQFMGKDNVP 516

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           FH + +P   L           + +  ++ ++G K SKS    +      E  +     R
Sbjct: 517 FHTVIFPGSQLGTGDDWTMLHHLNTTEYLQYEGGKFSKSRSIGVFGNNAQEIGLSPSVWR 576

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-E 385
           Y+L+       D  +       R N++L   +GN V+R V  +   Y+G++P        
Sbjct: 577 YYLISVRPETSDSQFSWSDFAARNNSELLANLGNFVNRVVKFVNAKYNGVVPDFNVDNLP 636

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
               +      +L    +NM+   + R L   ++L +  +++    K    L    P ++
Sbjct: 637 GYAQLKKDIDEILTNYVDNMEKVHLRRGLEIAMTLSARGNQFLQDNKLDNSLFAQEPAKS 696

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + +I  +A ++  F+P+ +  I+ +L  A   R     +  ++PG  ++K  +
Sbjct: 697 DAVVGVALNIIYTVASIMSPFIPETSEIIYRMLN-APALRIDDHFNLPIRPGHNINKA-E 754

Query: 505 PIFPRF 510
            +F R 
Sbjct: 755 YLFSRI 760


>gi|56417068|ref|YP_154142.1| methionyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56388300|gb|AAV86887.1| methionyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 455

 Score =  304 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 179/449 (39%), Positives = 271/449 (60%), Gaps = 14/449 (3%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
               FVD+ S  FR++  V     +DFIRTTE+RH      LW+++     IY G Y+G+
Sbjct: 8   PVHQFVDEISGAFRNLVGVSGFRCNDFIRTTEERHKRAVLALWERLRGNNQIYLGHYAGF 67

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           YS+RDE +Y + ++  G            V+W+EE GYFF+LS +Q+ LL +Y  +PEF+
Sbjct: 68  YSVRDETFYQERDLVDGK-----APTGAEVEWLEEPGYFFKLSEWQESLLKFYADNPEFV 122

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
           +P  + NEVISFV+SGL+DLS+SR      WGI++P D  +I+Y+W+DAL  YL   G+ 
Sbjct: 123 IPEGKFNEVISFVESGLRDLSVSRSKKSLSWGIEVPHDSDHIIYIWVDALCCYLALLGFP 182

Query: 246 DNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +       ++W +D     HV+GKDILRFHA+YWPA L++A+LPLPK++ +HG+ L++G+
Sbjct: 183 ETEG-EYKRYWGSDGAVSTHVVGKDILRFHAVYWPALLMAADLPLPKQIVAHGWWLNEGQ 241

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           KISKS+GNVIDP  +IE+ G+D  RYFL+ E   G D  +    L +R+N DLAN  GNL
Sbjct: 242 KISKSIGNVIDPFALIEQYGLDNCRYFLLSETPVGNDASFSGASLVERINCDLANNFGNL 301

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R+++++ ++  G IP      + +E+ ++    VL +  E M       AL  V++L 
Sbjct: 302 VQRTITLVHRECGGKIPEVEGMMQGEEAPIN-YEAVLVQYVEYMAEYRFFEALKFVMNLS 360

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           S  + Y   + PW+L K +   A  V++  +E IR + I+LQ FVP  A+KI D + +  
Sbjct: 361 SVANEYIARRAPWKLFKEDRKSAQAVVFKLLEYIRCIGIMLQPFVPDSASKILDQISLPA 420

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + R F+   +  + G  L  T  P+F + 
Sbjct: 421 DRRTFEHFSEFCRGGVSLG-TPTPVFGKL 448


>gi|254496016|ref|ZP_05108919.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354765|gb|EET13397.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 566

 Score =  304 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 132/543 (24%), Positives = 224/543 (41%), Gaps = 45/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I  
Sbjct: 14  MATERKMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMSGIQCISVCGDDAHGTPIML 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +        +         I YD +  T    +      ++ K+   G I 
Sbjct: 74  KAEQMGITPEALTTAIKISHEQDFQGFAIDYDCYHTTHSPENQALASAIYAKLQAGGTIV 133

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
           K      Y    E +  D  V             G + +   A + P   +         
Sbjct: 134 KKTIRQAYDPLKEMFLPDRYVKGTCPKCGAKDQYGDNCEVCGATYAPTDLIDAVSAISGA 193

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E YFF L  ++  L  +  +     L  E  N++  +  +GLK   +SR    
Sbjct: 194 KPIEKDSEHYFFDLPRFETLLKEWTRNG---HLQTEVANKLDEWFAAGLKQWDISRDAPY 250

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G  IP       YVW+DA   Y+ +   Y D    S A+FW  D      H +GKDI+ 
Sbjct: 251 FGFPIPGTIGKYFYVWLDAPIGYMASFKKYCDEHGVSFAEFWDKDSQAELYHFVGKDIVY 310

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L +++  LP  V++HGF+   G+K+SKS G  ++    +E +  + LRY+ 
Sbjct: 311 FHALFWPAMLAASDHRLPTAVYTHGFLTVDGQKMSKSRGTFLEARTYLEHLNPEYLRYYY 370

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + +    R+NADL   + N+ SR    I K +D  + +      S+ 
Sbjct: 371 AAKLNGRVDDLDLNFEDFTNRINADLVGKVVNIASRCAGFINKRFDNRLSS----NLSEP 426

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRAST 446
            + +    +   I E   ++   RA+  ++    +V++Y D  KPW L K          
Sbjct: 427 QLYTDLLNMRPTIIEAYVSRDYARAIRLIMDCADKVNQYIDTHKPWVLAKEEGRLAEVQD 486

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +A      L        ++++D  L     L+  F P+
Sbjct: 487 ICTMGINLFRILMTYLKPVLPLMAQAAEHFLNCPP--LTWEAIDSPLL-NHSLNA-FQPL 542

Query: 507 FPR 509
             R
Sbjct: 543 MVR 545


>gi|228999808|ref|ZP_04159381.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228759957|gb|EEM08930.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 543

 Score =  304 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 123/535 (22%), Positives = 223/535 (41%), Gaps = 43/535 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  GV
Sbjct: 5   FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D     F      L  +YD + RT  + HH+T + ++ ++ ++G IYK      
Sbjct: 65  TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124

Query: 128 YSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEEE 163
           Y      +  D  V       +                             N     E E
Sbjct: 125 YCETCTQFLPDRYVEGVCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184

Query: 164 GYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKIP 221
            ++F L  +Q ++      +  E             +++ GL+D ++SR       I + 
Sbjct: 185 HFYFALHKFQPQIKDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRDLPIGVPIPVK 244

Query: 222 DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
                 +YVWI+A+  Y + +  + +       +FW +     +V GKD + FH+I WPA
Sbjct: 245 GYEDKKIYVWIEAVAGYYSASKRWAEETRQDDGEFWSSSARTYYVHGKDNIPFHSIIWPA 304

Query: 278 FLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL       
Sbjct: 305 VLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTINAPEN 364

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +         N++L    GN V+R++  I K YDG +P        +  +      
Sbjct: 365 RDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGH----INLELKERIEE 420

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + + +   ++      A+  +   V   ++YFD Q PW+ ++  P      +Y  V  I 
Sbjct: 421 LYRSVGNAIEQAHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEETIYTCVYFIV 480

Query: 457 QLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
             A LL+ F+P  + ++ ++L + +    C   L +R+           P+F R 
Sbjct: 481 NFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERISH-------VQPLFERI 528


>gi|158341247|ref|YP_001522389.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|187645697|sp|A8ZQ66|SYM1_ACAM1 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|158311488|gb|ABW33099.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 558

 Score =  304 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 127/546 (23%), Positives = 235/546 (43%), Gaps = 45/546 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ AD+ ARF R +G +VL+   TDEHG     AA +
Sbjct: 2   RYLITSALPYINGIKHLGNLVGSMLPADIYARFLRQEGEEVLYICATDEHGTPAEIAAID 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F  +     +++     +S+D F RT+   +H+  +  +++++ +  I +   
Sbjct: 62  AGLEVAEFCAKQYHKQKEIYKRFGLSFDYFGRTSAPENHELTQYFYQQLAKQNFIEEREI 121

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE-------GYF 166
           S +Y+L D+ +  D  V            +G   +       P + ++            
Sbjct: 122 SQFYALDDQRFLPDRYVTGTCPHCGYEQARGDQCENCTKVLTPTELIKPRSTISGSTHLE 181

Query: 167 FRLSAYQDKLLSYY------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            R S +    L             +       ++  + ++  GLK   ++R    WG+ +
Sbjct: 182 LRTSRHLFLRLDKLSDEVRNWVDKQTQWSTLTKSIALKWLNEGLKSRCITRDLV-WGVPV 240

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA---DLH---VIGKDILRFHA 272
           P +   + + YVW DA   Y++ T    +   +  + W     D+H    + KD L FH 
Sbjct: 241 PTEGFERKVFYVWFDAPIGYISATKAWGDITNNDWECWWKESDDVHYTQFMAKDNLPFHT 300

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I WPA +L +  P      +    ++ + G K S S    +   + +E    D  RY L+
Sbjct: 301 IMWPATILGSREPWKMVDYIKGFNWLNYYGGKFSTSSQRGVFLDQALEIASADNWRYMLI 360

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  D  +  +  +K+VN +LA+ +GN V+R +      +   +P  G   +++  +
Sbjct: 361 ANAPESADSAFTWEQFQKQVNKELADNLGNFVNRILKFTASRFGMTLPEGGTPGDAEAEL 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
              C+ +++++R+ + N    RA   + +L    ++Y D + PW L KT+ D  + V+  
Sbjct: 421 QVTCNELVEKLRKYLHNLEFRRATETLNALWRTGNQYIDVRAPWVLFKTDQDETAMVIRT 480

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENR----CFQSLDQRLKPG--FMLHKTFD 504
            V +IR  AI    F+P     +FD L + D  R       S    L  G  FM+     
Sbjct: 481 CVNLIRLYAISSAPFIPHTTQALFDALQLTDVERRHTMTEASDLTLLAAGRSFMVPA--- 537

Query: 505 PIFPRF 510
           P+F + 
Sbjct: 538 PLFQKI 543


>gi|268570204|ref|XP_002640717.1| Hypothetical protein CBG19784 [Caenorhabditis briggsae]
          Length = 474

 Score =  304 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 178/485 (36%), Positives = 270/485 (55%), Gaps = 21/485 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKAA 62
           Y+++ I Y NA+PHIGHAY  ++ D   R+++L          LF+ GTDEHG       
Sbjct: 1   YVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSIGTDEHGTSQL--- 57

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG T K F DQ S  F  + D L+IS+ +FIRTT+ +H ++ +  W+ + D+G IYK 
Sbjct: 58  --AGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHFWRVLQDRGHIYKS 115

Query: 123 CYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            YSG+YS+ +E +  ++EV + A+           V+W+EEE Y FRLS +++K+  + E
Sbjct: 116 SYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFRLSEFREKVGEWIE 175

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                     +   + S    G   +S +RK   WGI +PDDP   +YVW+DAL NYLT 
Sbjct: 176 KTDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTIYVWLDALVNYLTV 235

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +GY           WP    VIGKDI +FH  YWPAFL++A+LPLP++VF HG  L    
Sbjct: 236 SGYP-----KDRLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVHGHWLVDNV 290

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P   I++   + LRYFL+++     D  +  +   + VN+DL N +GNL
Sbjct: 291 KMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSDLVNNVGNL 350

Query: 362 VSR-SVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           ++R +V  I K   Y   +       E  E +L +     ++  E   +   ++ + Q++
Sbjct: 351 LNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYYYKGIEQLM 410

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + E +R F   +PW+  +T+ +R  ++L+VT E IR ++ILLQ   PK+AN   D L 
Sbjct: 411 LTMKEANRVFQLSQPWK--ETDSERLESLLFVTYETIRIVSILLQPITPKMANFCLDRLG 468

Query: 479 VADEN 483
           V   N
Sbjct: 469 VDQRN 473


>gi|322801003|gb|EFZ21784.1| hypothetical protein SINV_04670 [Solenopsis invicta]
          Length = 612

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 175/537 (32%), Positives = 268/537 (49%), Gaps = 60/537 (11%)

Query: 5   EKLYISTAIAYPNAQ----------------PHIGHAYEMIIADVLARFHRLDGLDVLFT 48
           +  YI+T I Y NA                 PHIGH Y  ++AD +AR++ + G  + FT
Sbjct: 50  QNKYITTPIFYVNAGTLSYYNRKVKYIFLLGPHIGHLYSAVLADAVARYNNMLGHKIFFT 109

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           TGTDEHG KI  AA  AG+    +  Q S+ F++M D  ++ Y  FIRTTEKRH D    
Sbjct: 110 TGTDEHGNKIKTAAAAAGLPNLEYCTQISQQFKEMCDRFEVDYSRFIRTTEKRHCDAVYH 169

Query: 109 LW--------------------KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            W                    K++ +KG IY G YSGWY + DEA+ +D ++ +  D  
Sbjct: 170 FWVLRTNLFLTSTSFAISCVTHKRLEEKGHIYLGKYSGWYCVSDEAFLSDADLIEQKDST 229

Query: 149 YYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
               +      N V+W EEE Y FRLSA+QD L  + +       P      +  +V+ G
Sbjct: 230 GKIIKVSAESGNTVEWTEEENYKFRLSAFQDDLKYWLKDENTV-KPALYHKTLSQWVEEG 288

Query: 204 LKDLSLS----RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           +    LS    R    W +  P D  + +YVW+DAL NYLT  GY +         WP +
Sbjct: 289 VCLQDLSITRLRNKVPWAMPSPCDESHSIYVWMDALINYLTVLGYPNESYKEF---WPPN 345

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + VIGKDIL+FH IYWPAFL++A L  PK +  H       +K+SKS+GNVI P +   +
Sbjct: 346 IQVIGKDILKFHGIYWPAFLIAAGLEPPKTLLCHAHWTVDHKKMSKSIGNVISPFKAAND 405

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              + LRYF++RE     D  Y    +   +N++LA+ +GNLVSR     + +     P 
Sbjct: 406 YSEEGLRYFILREAVPQNDANYSSKKIVNILNSELADTLGNLVSRCAGKAV-NPSKEFPD 464

Query: 380 PGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           P  +     ++  +        V ++ R++ +   +H  +  VIS++   ++     +PW
Sbjct: 465 PAKYWNVLQSQVADETREALKSVGEKARKSYEEYNLHHVVDAVISMLHCANKMVAYHEPW 524

Query: 435 ELKKT-----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +L+K      + +    V+ + +E  R  A++L   +P+L++ + D L +  ENR +
Sbjct: 525 QLRKQVDDANSIEELKAVISLALESSRIGALILYPIIPRLSSSLLDFLNIPKENRMW 581


>gi|82703057|ref|YP_412623.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123727136|sp|Q2Y7P0|SYM_NITMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|82411122|gb|ABB75231.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 728

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 124/569 (21%), Positives = 215/569 (37%), Gaps = 62/569 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+ +++A+ Y N   H+GH  E I  D+  RF ++   +V +    D HG  I   A
Sbjct: 2   NKRKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQEHEVHYVCADDAHGTPIMLRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G+T +  +D+     +   D   I +D +  T    +   C  +++++     I K 
Sbjct: 62  EQEGITPRQLIDRVWHEHKTDFDGFHIGFDHYYTTDSPENQAFCEDIYRQLRAGELIAKR 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV-------------- 157
               +Y    + +  D  +             G   +   A + P               
Sbjct: 122 SVEQFYDPVKQMFLPDRYIKGECPRCHAGDQYGDSCEACGATYLPTDLISPYSAVSGARP 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYES------------HPEFILPIERRNEVISFVKSGLK 205
           +      YFF+LS  + +                        L  E  N++  ++ +GL 
Sbjct: 182 ERRTSNHYFFKLSDVRCEAFLKNWIFESIPAQPGVALETRPRLQPEAANKMNEWLSAGLV 241

Query: 206 DLSLSRKTFDWGIKIPDDPQ-YIMYVWIDALTNYLTTTGYLDNPD---------GSKAKF 255
           D  +SR    +G  IP        YVW+DA   Y  +       +           +   
Sbjct: 242 DWDISRDAPYFGFPIPRTGGKKFFYVWLDAPVGYFGSFKNYFKQNQRTQAEIDEFLRPGG 301

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
               +H IGKDIL FHA++WPA L  +    P ++++HGF+   G+K+SKS G  I    
Sbjct: 302 NTEMVHFIGKDILYFHALFWPAMLEFSGYRTPTQIYAHGFLTVNGQKMSKSRGTFITAES 361

Query: 316 VIEE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++ +  + LRY+   +     +D     +    RVN+DL     N+ SR    I K +
Sbjct: 362 YLKQGLNPEWLRYYYAAKLNDSMEDIDLSFEDFVARVNSDLVGKYVNIASRCAGFITKKF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQE----------IRENMQNQLIHRALAQVISLVSE 423
            G + T      S +         L E          I    + +   +A+ +++S    
Sbjct: 422 GGEL-THNVSEASRKWFNQFLFCELGEGDTFLGRHMSIANFYERREYSKAIKEIMSAADV 480

Query: 424 VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++Y D  KPW L K   N      V  V + + R L + L+  +PKLA +    L +  
Sbjct: 481 ANQYVDRMKPWVLAKDSRNDRELHEVCSVALNMFRMLTVYLKPVLPKLAMEAEQFLGLDP 540

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                 +   RL P       +  +  R 
Sbjct: 541 LTWKDANSQHRLLPDGHRINDYQHLMTRI 569


>gi|284989481|ref|YP_003408035.1| methionyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062726|gb|ADB73664.1| methionyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 597

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 157/589 (26%), Positives = 241/589 (40%), Gaps = 87/589 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +R  +  + A  Y N   HIGH     + +DV +R+HR+ G  VL  +GTDEHG  I 
Sbjct: 1   MSDR-HILTAVAWPYANGPRHIGHVSGFGVPSDVFSRYHRMVGDRVLMVSGTDEHGTPIT 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA   GV+ +   D+N+R        L +SYD F RTT   H    + ++  +   G +
Sbjct: 60  VAADAEGVSPREIADRNNRVIVGDLQSLGLSYDLFTRTTTGNHAAISQEIFLGLLKNGYV 119

Query: 120 YKGCYSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHN------PVQ---------- 158
           +     G  S          Y        G DG   +   N      PV           
Sbjct: 120 FPKTTLGAISPSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPVDLINPRSRING 179

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
               ++EEE YF  L A+   L  + +S   +   +    + +    + LK  S +R   
Sbjct: 180 ETPKFVEEEHYFLDLPAFTRSLGDWLDSRKGWRPNVLNFAKNLL---TDLKPRSYTRD-I 235

Query: 215 DWGIKIPDD-----PQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWP-----ADLHV 262
           DWG+ +P +     P   +YVW DA+  YL+ +       G     + W      +  + 
Sbjct: 236 DWGVPVPLEGWRDRPDKRIYVWFDAVVGYLSASIEWARRSGDDDAWRQWWQTPDASAYYF 295

Query: 263 IGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLG 308
           +GKD + FHA  WPA LL                 L LP +V S  F+  +G K S S  
Sbjct: 296 MGKDNIVFHAEIWPAQLLGYNGEGDKGGTPGSLGRLNLPTEVVSSEFLTMEGRKFSSSRQ 355

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            VI   + +     DALRYF+       +D  +      +R N +L  G GNLV+R+VSM
Sbjct: 356 VVIYVRDFLARYDADALRYFIAAAGPESQDTDFTWAEFLRRNNDELVAGWGNLVNRTVSM 415

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K+    +PTPG  T++D ++L   S     + E +       A A+ + +V E ++Y 
Sbjct: 416 AAKNVG-AVPTPGELTDADRALLGTTSGAFGPVGELLSRNRQKAAAAEAMRVVGEANKYL 474

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             Q PW+L K +P R  TVL+  ++ +     LL  F+P  A K+ ++L           
Sbjct: 475 SDQAPWKL-KEDPARRDTVLHTALQAVSDCNALLTPFLPHSAQKVHELLGGTGVWSPAPR 533

Query: 489 LDQ---------------------------RLKPGFMLHKTFDPIFPRF 510
           +++                            L PG  L     P+F + 
Sbjct: 534 IEEVTDLDDGSPYPIITGDHAQGQAVWASRPLPPGTPL-SPPTPVFKKL 581


>gi|6094406|sp|O74634|SYMM_CANAL RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3641642|dbj|BAA33373.1| mitochondrial methionyl-tRNA synthetase [Candida albicans]
          Length = 577

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 184/544 (33%), Positives = 280/544 (51%), Gaps = 51/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKAFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  +A+  D++YD FIRTT+  H +  R  W  + +KG IY
Sbjct: 75  TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ + +    V  G   +  +   N V + EE  YFF+LS +Q++L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQEETNYFFKLSMFQEQL 194

Query: 177 LSYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++     + L DLS+SR      W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +    +   +KF       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPA-THVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGN++DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNLVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR---------------------SVSMILKDYDGMIPTPGAFTE 385
           ++  +A L     NL+SR                     ++  I++ Y     +      
Sbjct: 374 QRSRDAVL-GKYCNLISRIGGKNFSIEEAVKSFASGEFNNIREIIETYTINKDSVEGLLS 432

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-----TN 440
           S   + +  + +  ++     N    RA+    S++++ ++ F + +PW   K       
Sbjct: 433 SLNKLTTDLNDLYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPET 492

Query: 441 PDRASTVL--------YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P               Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +L   
Sbjct: 493 PAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTLSAD 552

Query: 493 LKPG 496
           L+ G
Sbjct: 553 LQYG 556


>gi|331694702|ref|YP_004330941.1| methionyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326949391|gb|AEA23088.1| Methionyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 597

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 151/585 (25%), Positives = 242/585 (41%), Gaps = 88/585 (15%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  + A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A  
Sbjct: 4   RVLTAVAWPYANGPRHIGHVSGFGVPSDVFSRYRRMVGDQVLMVSGTDEHGTPIQVQADA 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ +         L +SYD F RTT   H++  + L+  +   G +     
Sbjct: 64  EGLTPRQLADKYNEVITRDLQGLGLSYDLFTRTTTSNHYEVVQNLFLALHKNGYVVSKTA 123

Query: 125 SGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G  S          Y        G DG   +   N                      Q+
Sbjct: 124 MGAISPSTGRTLPDRYVEGTCPICGYDGARGDQCDNCGNQLDPADLINPRSKINGEVPQF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E E +F  L A+ + L  +  +  ++   + + +  +      LK  +++R   DWG+ 
Sbjct: 184 VETEHFFLDLPAFAESLGQWLSTRTDWRPNVLKFSANLV---EDLKPRAITRD-LDWGVP 239

Query: 220 IPDD-----PQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDI 267
           IP D     P   +YVW DA+  YL+ +      +PD    K W  D      + +GKD 
Sbjct: 240 IPLDGWRDQPMKRLYVWFDAVIGYLSASVEWARRSPDPDAWKQWWTDPSAEGYYFMGKDN 299

Query: 268 LRFHAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH++ WPA LL                 L LP ++ S  ++   G K S S G VI  
Sbjct: 300 IVFHSVIWPALLLGQNGAGDRGGEPGVFGTLNLPSEIVSSEYLTMSGSKFSTSRGRVIYV 359

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            + + E G DALRYF+       +D  +  D   +R N +LAN  GNLV+RS+SM  K+ 
Sbjct: 360 GDFLREFGPDALRYFIAVAGPENQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKNV 419

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
              IP P A   +D  +L+V       +   +      +A  + + +V+  +RY   Q+P
Sbjct: 420 G-AIPKPLAPEAADAELLAVSRAGFDTVGGLLARNRFKQAAGEAMRVVTAANRYLSDQEP 478

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA------DENRCFQ 487
           W+ +K +P+R  T+L+  ++V++    LL  F+P  A ++ + L          E R   
Sbjct: 479 WK-RKDDPERRDTILHTALQVVQDANTLLTPFLPHAAQQVHEALGGTGVWAAQPEIRDVD 537

Query: 488 SLDQRLKPGFML----------------------HKTFDPIFPRF 510
            L     PG+ +                           PIF + 
Sbjct: 538 DLGDG--PGYKVLTGDYATESARWESTPIETGRPLAKPTPIFAKL 580


>gi|254510427|ref|ZP_05122494.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534138|gb|EEE37126.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 577

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 115/555 (20%), Positives = 227/555 (40%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 8   RILITSAIPYINGIKHLGNLIGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAK 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +         D+A+   +S+D F R++  ++    +    K+ + G I +   
Sbjct: 68  AGKPVAEYCADMYAVQADIANRFGLSFDHFGRSSSDQNKHLTQHFAGKLEEAGLIREVSE 127

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D          G D    +   N                       +
Sbjct: 128 KQVYSNTDGRFLPDRYIEGTCPNCGYDRARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 187

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 188 VRETKHLYLRQSALKDQLDAWIDSKSDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 246

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLD----NPDGSKAKFWPAD-------- 259
            +    Q        + YVW DA   Y+   G         D    ++W  D        
Sbjct: 247 PVKKGDQDWPGMEGKVFYVWFDAPIEYIACAGEWAEANGKTDADWERWWRTDKGADDVRY 306

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +
Sbjct: 307 VQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 366

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 367 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEAV 426

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G F   ++ +++  ++ ++    +M+   + ++  ++ ++    + Y  +  PW   
Sbjct: 427 PEGGEFGAREQELIAELTKRIRAYEGHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSTF 486

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           K +P +A+  + + + +IR  A+L   F+P+ + ++   +   D        +  + L  
Sbjct: 487 KEDPAQAAAQVRLGLNLIRLYAVLSAPFIPETSARMLSAMNTLDTGWPDDVDAALRALPA 546

Query: 496 GFMLHKTFDPIFPRF 510
           G       D +F + 
Sbjct: 547 GHAFT-VPDVLFAKI 560


>gi|284161342|ref|YP_003399965.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011339|gb|ADB57292.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 661

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 133/520 (25%), Positives = 225/520 (43%), Gaps = 46/520 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++  + Y N + HIGH    I ADV  R+ RL G  VLF  G+D HG  I   A+  G+
Sbjct: 3   LVTCGLPYANGKAHIGHLRTYIPADVYVRYLRLLGEKVLFICGSDCHGTPIVVNAEKEGI 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + K  VD+   +F+ +   L++ +D + RT  + +H   + + K + DKG IY       
Sbjct: 63  SPKELVDRYHEHFQKVFKELEVEFDFYGRTDAEYNHRRTQEIVKTLMDKGYIYAKEIELA 122

Query: 128 YSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQWMEE 162
           Y  + + +  D  V                                      +P  + ++
Sbjct: 123 YCPKCDRFLPDRYVEGICPYCGAVARGDECDQGCGRHLEPGEILQPKCKICGSPAVFKKQ 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + YFF+L+A++D L+ Y     +        N    +V+  LKD  ++R   +WG+K   
Sbjct: 183 KHYFFKLTAFKDFLMDYL--ENKLQGTSNALNYAREWVRRELKDWCITR-NLEWGVK-FP 238

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN-PDGSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
               ++YVW+DA   Y++ T         +    W         H IG DI+  H I+WP
Sbjct: 239 GENLVVYVWVDAPIGYISFTEQACKLKGCNWEDIWKNGEISDITHFIGLDIVYHHCIFWP 298

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREIA 334
           A L  A+  LPK V + G +  +G+  SKS G V+   +  +      D LRY++V   +
Sbjct: 299 AMLKGADYSLPKAVVASGMVKVEGKTFSKSRGYVVWVEDDYLKAGFHPDYLRYYIVSYTS 358

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +     K +VN +L    GN + R +    K++  +          D+  L   
Sbjct: 359 HEKDLNFSWRVFKDKVNNELIGTFGNFIYRVLHFAWKNFGRVRMN------VDKETLEKI 412

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           S V  +I E+++           + L +  + +F ++KPWEL KTN +    VL   +++
Sbjct: 413 SNVKDKIVESLKVWEFKEICDAFMELATFGNEFFQSKKPWELIKTNREECERVLANAIQL 472

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           ++ L I     +PK    +  ++ +  +N     LD  LK
Sbjct: 473 VKALLIFAYPVMPKSMENVAKVINLDLKN---ARLDDALK 509


>gi|296109584|ref|YP_003616533.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434398|gb|ADG13569.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 639

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 136/527 (25%), Positives = 245/527 (46%), Gaps = 43/527 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             I+TA+AY N   H+GH     I AD+L ++ +L G +V+   GTD HG  I   A+  
Sbjct: 2   YLITTALAYTNGPLHLGHVRSTYIPADILYKYLKLRGEEVIHVGGTDNHGVPILLRAEKE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G   +  V+   +  ++  D L I +D F +T  + H  T +  + K+ + G IY+    
Sbjct: 62  GKKPEEIVEYYHKRIKEDLDSLGIEFDVFGKTHSEIHIKTAQEFYLKLVENGYIYEKEIE 121

Query: 126 GWYSLRDEAYYNDDEVYKGAD-------GQYYNAQHNPVQWMEEE--------------- 163
            +Y    + +  D  V            G +  +    ++  E                 
Sbjct: 122 QFYCENCKKFLPDRYVEGLCPYCGGEARGDHCESCGRHLEPFELREPYCVICGSKNLKVK 181

Query: 164 ---GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               YFF+LSA +++L +Y ++  E   P   +N  ++++K  L D  +SR    WG+ I
Sbjct: 182 KSIHYFFKLSALKEELENYIKNAKEM--PEHVKNLALNWIKE-LHDWDISRD-IPWGVPI 237

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIYWPAF 278
           P     +MYVW++A   Y++ T  L      K          H IGKDI   HA++WP  
Sbjct: 238 PGT-DKVMYVWLEAPIGYISFTKMLGEEYYKKYWLNKDSKIYHFIGKDITVHHAVFWPGM 296

Query: 279 LL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L+  ++  LP  V S G++  +G+K+S S G VI   + +E+   D LRY+LV      K
Sbjct: 297 LIAHSSYNLPSAVISGGYLTLEGKKMSTSKGWVIWIKDFVEKFDSDYLRYYLVMAAPLFK 356

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +  +  +K+VN +L N IGN   R ++   +    +       +E    IL +    
Sbjct: 357 DCDFSLEEFQKKVNNELINIIGNFTHRVLTFTYRKCKKVPLVEIEESE----ILKLIDET 412

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++E  + ++      AL +V+ L  + + YF  ++PW +K  + ++   VLY++ ++++ 
Sbjct: 413 VEEYDKLIREFKFRDALNKVLHLAIKGNEYFQKEEPWNIK--DEEKLKEVLYLSCKLVKA 470

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           ++ LL  ++P  + ++   L + +E    +   + LK   ++ K  +
Sbjct: 471 ISYLLYPYMPNKSREL---LNIMNEELDLELRGRELKKPKIVFKKIE 514


>gi|114570377|ref|YP_757057.1| methionyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315761|sp|Q0ANL8|SYM_MARMM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114340839|gb|ABI66119.1| methionyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 572

 Score =  303 bits (775), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 128/556 (23%), Positives = 242/556 (43%), Gaps = 55/556 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF RL G DVL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFQRLRGHDVLYVCATDEHGTPAELAADA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + + D+     +   +   +SYD F RT+   +    +   + + +KG I +   
Sbjct: 63  AGMDVRAYCDEQHDIQKRSGEGFSLSYDYFGRTSNAPNIRLTQHFAQVLEEKGLIAERVE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP---------------------VQ 158
              +S+ D+ +  D        + G +    +   N                      ++
Sbjct: 123 EQVFSIDDDRFLPDRYVEGTCPHCGFERARGDQCDNCGRLLEPTDLKEPYSKISGSKNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +      +  + K+  + ++  E+  P   ++    ++  GL+D S++R    WG+
Sbjct: 183 VRETKHLHLVQTQMETKIRDWVDASTEW--PSLAKSIAYKWLDEGLRDRSITRD-LKWGV 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD--------LHV 262
            +  D          + YVW DA   Y+  T  + +   G    +W  D        +  
Sbjct: 240 PVAQDGTPREGFEGKVFYVWFDAPIGYIGATVEWAEAGGGDWESWWRTDKGADDVTYVQF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +PA +L +  P     K+ +  ++   G K S S    +   + ++ +
Sbjct: 300 MGKDNVAFHTVSFPATILGSEEPWKTVDKLKAFNWLTWYGGKFSTSEKRGVFMDQALDIL 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L      G D  +  +  +  +N+DLAN +GN V+R     +  +DG +P+ 
Sbjct: 360 PGDYWRWYLTANAPEGSDAAFTWEHFQGLINSDLANVLGNFVNRITKYTVSKFDGTLPSA 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E++  + +   + L  +  NM+     +A A+V ++ +  + Y    +PW   K++
Sbjct: 420 GTPGENEAWMAAELDQRLPALVANMEAMEFRKAAAEVRAIWAAGNEYLTKAEPWVKYKSD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ------SLDQRLK 494
            D A+  +   + ++    IL Q F+P+ A+KI D L V D+ R ++      +L   L 
Sbjct: 480 VDAAAVGVRTGLNLVALFGILAQPFIPEAASKILDALGVPDDRRSWEFDGPASALLDALP 539

Query: 495 PGFMLHKTFDPIFPRF 510
            G  +      +F + 
Sbjct: 540 HGMAIT-PPAVLFAKI 554


>gi|126131760|ref|XP_001382405.1| methionyl tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126094230|gb|ABN64376.1| methionyl tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 757

 Score =  303 bits (775), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 105/549 (19%), Positives = 223/549 (40%), Gaps = 44/549 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + ++  GTDE+G      
Sbjct: 193 NERNILITSALPYVNNVPHLGNIIGSVLSADIYARYAKNRNYNAVYVCGTDEYGTATETK 252

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +   D+  +  +++ D  DI +D F RTT     +  + ++ ++     + +
Sbjct: 253 ALEEKVTPQQLCDKYHKIHKEVYDWFDIGFDYFGRTTTPLQTEIAQDIFTRLHKNNYLEE 312

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 Y    +++  D  V            +G          +P+Q ++         
Sbjct: 313 RTTEQLYCEEHKSFLADRFVEGTCPHCQYEDARGDQCDKCGNLLDPLQLIKPRCKVDGAT 372

Query: 165 YFFRLSAYQDKLLSYY---------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
              R S +    L+            +          +    S++K GL+   ++R    
Sbjct: 373 PVVRESTHIYLKLNELEGELAEWVDHASSHGEWSKNAKTITASWIKRGLEPRCITRD-LS 431

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD------LHVIGKD 266
           WG  +P +   + ++YVW DA   Y++ T  Y  + +G   + W  +         +GKD
Sbjct: 432 WGTPVPLEGYEEKVLYVWFDATIGYVSITANYFKDHNGDDWRKWWKNPENVDLYQFMGKD 491

Query: 267 ILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVD 323
            + FH + +PA  +       K   + +  ++ ++  K SKS G  +      +  +   
Sbjct: 492 NVPFHTVVFPASQIGTRDVWTKLHHLSTTEYLQYENGKFSKSRGVGVFGNSAKDTGIPAS 551

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
             RY+L        D  +  +    + N++L   +GN V+R V  ++  Y+G+IP     
Sbjct: 552 VWRYYLASVRPETSDSQFSWEEFVTKNNSELLANLGNFVNRIVKFVIAKYNGVIPKFDTK 611

Query: 384 TESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
              D E   +  +++L+   + M+   + + L   +++ S  +++    K    L    P
Sbjct: 612 NVPDYEKFETEVNQLLKSYVDTMEAVSLRKGLELAMAISSRGNQFLQDNKLDNSLYANLP 671

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           D++  V+ V + ++  ++ ++  F+P+   +I +IL     +      +  L+ G  + K
Sbjct: 672 DKSDAVVGVALNLVYLVSAIIFPFMPETTKQINEILNAPALSIT-DKFELVLEAGHNIGK 730

Query: 502 TFDPIFPRF 510
               +F R 
Sbjct: 731 A-QYLFKRI 738


>gi|304321411|ref|YP_003855054.1| methionyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300313|gb|ADM09912.1| methionyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 575

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 122/550 (22%), Positives = 226/550 (41%), Gaps = 51/550 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +++A+ Y N   H+G+    M+ ADV ARF R  G +V F   TDEHG     AA+ 
Sbjct: 3   RILVTSALPYINGVKHLGNLVGSMLPADVYARFMRARGHNVAFLCATDEHGTPAELAARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +          +A    +S+D F R++   +H+  R    ++  +G + +   
Sbjct: 63  AGQPVAEYCAAQHETQASLAAAFGLSFDHFGRSSSPTNHELTRHFADRLEAEGYLEERVS 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP---------------------VQ 158
              YS  D  +  D          G +    +   N                      V+
Sbjct: 123 QQVYSNADARFLPDRYVEGTCPNCGFEKARGDQCDNCGKLLDPTDLIDPYSAISGSKDVE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   S  + ++ ++ ++H ++  P+  R+    ++  GL+D S++R   DWGI
Sbjct: 183 MRDTRHLYLLQSKLEGEVRAWVDTHKDW--PLLTRSIAYKWIDEGLRDRSITRD-LDWGI 239

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDIL 268
            +  D     + YVW DA   Y+  T   D         W  D        +  +GKD +
Sbjct: 240 PVRRDGFEGKVFYVWFDAPIEYIAATKEWDPEGWESW--WRTDQGADEVTYVQFMGKDNV 297

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FH +++P  L+ +  P      + S  ++   G K S S G  I   + I+ +  D  R
Sbjct: 298 AFHTVFFPCTLIGSREPWKRVDHLKSLNWLTWYGGKFSTSEGRGIFMDQAIDLMPADTWR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+       D  +        VN DLA+ +GNLV+R        ++G +P  G   E+
Sbjct: 358 WYLMANAPESDDTAFTLQSFAGAVNKDLADVLGNLVNRVTRFTASKFEGQVPPGGEPGEA 417

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           ++++          +   ++     +A A +  L +  + Y     PW   KT+PD A+ 
Sbjct: 418 EQTLYREVDDRCAALTGALEAMEFRKAFAALRGLWAAGNEYLQVTAPWTAFKTDPDAAAV 477

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF-VADENRCFQS-----LDQRLKPGFMLH 500
            +   + +I  +A +    +P+ A+KI  I     +E   + +     L  R++PG  + 
Sbjct: 478 SVRTALNLIMLIAEVSAPVIPETADKILGIFGRQGEEPPAWPTGPAAQLLTRVQPGTPVP 537

Query: 501 KTFDPIFPRF 510
              + +F + 
Sbjct: 538 AP-EVLFKKI 546


>gi|283777954|ref|YP_003368709.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436407|gb|ADB14849.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 696

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 127/536 (23%), Positives = 216/536 (40%), Gaps = 41/536 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++ ++ A+ Y N   HIGH  E I  D+  RF +L G   +F    D HG  I   A+ 
Sbjct: 3   KRILVTAALPYANGPIHIGHLVEYIQTDIWVRFQKLRGERCIFLCADDTHGTAIMIRAKA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +  + + S   +       I +D++  T    +   C  +W  + +KG I +   
Sbjct: 63  EGRTEEALIAEMSAAHQRDFAGFQIEFDNYGSTNSPENRLLCHQIWGSLREKGLIVEKDV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG--------- 164
           S  +      +  D  V             G +     + + P + +  +          
Sbjct: 123 SQLFDPVAGTFLADRFVKGNCPKCGSPDQYGDNCDKCGSTYTPAELVNPKSTLSGATPEV 182

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               + F         L+ +  + + +           F+   L+D  +SR    +G +I
Sbjct: 183 RSAPHLFVQLEKLHGFLNEWTQNGKHLQDEVANYLKGHFLGEELRDWDVSRPAPYFGFEI 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           PD P    YVW DA   Y+ +T      +G +   W  +      H IGKDI  FH ++W
Sbjct: 243 PDSPGNYWYVWFDAPIGYIASTLEWCKRNGEELDTWWKNPETEIHHFIGKDITYFHTLFW 302

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           P  L SA L LP KV  HGF+   GEK+SKS G  +     ++ +   ALRYF   ++  
Sbjct: 303 PGMLKSAELNLPTKVHIHGFLTVDGEKMSKSKGTFVKAETFLKHLDPAALRYFYASKLGP 362

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + D    ++N+DL   + NL SR+   +            A    D  +    
Sbjct: 363 RLDDLDLNVDEFTAKINSDLVGKVVNLASRTSKFV------QTSGLSAVYPDDGGLFDRA 416

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTV 452
           +   +EI +  Q+    RA+  ++ L    + + + + PW+L K      +   +  V +
Sbjct: 417 ALAGKEIADAYQHCDYARAMRLIMELADRANPFIEERAPWKLAKDPAAAQQLQDICSVGL 476

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF---VADENRCFQSLDQRLKPGFMLHKTFDP 505
            + RQ+A+ L   +PKLA +   +L    V+ +      L   + P   + K  DP
Sbjct: 477 NLFRQIAVYLAPVLPKLAAEAGVLLNDKIVSWDQSQTPLLGTPVGPYSHMMKRIDP 532


>gi|296108530|ref|YP_003620231.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295650432|gb|ADG26279.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 664

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 133/537 (24%), Positives = 228/537 (42%), Gaps = 45/537 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           + +++A+ Y N   H+GH  E I  D+  R H++ G+  +   G D HG  I   A+  G
Sbjct: 1   MLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMLGIQCISVCGDDAHGTPIMLKAEQLG 60

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T +    +   +         I YD +  T    +      +++++   GDI K     
Sbjct: 61  ITPEALTAEIKLSHEKDFKAFAIDYDYYHTTHSPENQALATTIFERLQAGGDIVKKTIRQ 120

Query: 127 WYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW--------------ME 161
           +Y    + +  D  V             G + +   A ++P                 ME
Sbjct: 121 FYDPVKQMFLPDRYVKGTCPKCAAVDQYGDNCEVCGATYSPTDLINPVSVISGASPVEME 180

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E YFF L  Y++ L  +        L  E  N++  + ++GLK   +SR    +G  IP
Sbjct: 181 SEHYFFDLPRYEELLKDWTRKG---HLQTEVTNKLSEWFEAGLKQWDISRDAPYFGFPIP 237

Query: 222 DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFW-----PADLHVIGKDILRFHAIYW 275
             P    YVW+DA   Y+ +   Y D    S  +FW         H +GKDI+ FHA++W
Sbjct: 238 GVPDKYFYVWLDAPIGYMASFKKYCDERGVSFDEFWDKASKTELYHFVGKDIVYFHALFW 297

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IA 334
           PA L ++    P  V++HGF+  +G+K+SKS G  I+    +  +  + LRY+   +   
Sbjct: 298 PAMLAASGFRTPTAVYTHGFLTVEGQKMSKSRGTFIEARAYLAHLHPEYLRYYFAAKLNG 357

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + D    RVNADL   + N+ SR    I K +D  + +       ++ + +  
Sbjct: 358 RVDDLDLNFDDFVNRVNADLVGKVVNIASRCAGFINKRFDNRLSS----ELINQKLYNDL 413

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTV 452
               + + +   ++   RA+ Q++    +V++Y DA KPW L K          +  + +
Sbjct: 414 LSAREFVIDAFVSRDYARAIRQIMDCADKVNQYIDANKPWVLAKDESKLNEVHAICTMGI 473

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            + R L   L+  +P +A    + L    E   + S+D+ L        TF P+  R
Sbjct: 474 NLFRILITYLKPVLPMMAKASEEFLN--SEPLHWGSIDKPLL--NHRINTFKPLMVR 526


>gi|50287813|ref|XP_446336.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525643|emb|CAG59260.1| unnamed protein product [Candida glabrata]
          Length = 750

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 112/546 (20%), Positives = 217/546 (39%), Gaps = 41/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G     
Sbjct: 192 EGERNILITSALPYVNNVPHLGNIVGSVLSADIFARYCKSRNYNTLFICGTDEYGTATET 251

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GV+ +   D+  +   D+     I +D F RTT ++  +  + ++ K+   G + 
Sbjct: 252 KAIEEGVSPRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEQQTEIAQDIFLKLDKNGYLG 311

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +      Y     ++  D  V            +G          +P + +         
Sbjct: 312 EESMKQLYCPVHNSFLADRYVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDNA 371

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               + S +    L   E   +                +    S++K GLK   ++R   
Sbjct: 372 IPEPKTSDHIFLALDKLEPEIKKWVEKASTEGEWSKNSKTITNSWLKDGLKPRCITRD-L 430

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + +      ++YVW DA   Y++ T           K  P D+     +GKD + 
Sbjct: 431 VWGTPVPLEKYKDKVLYVWFDATIGYVSITANYTKNWEQWWKK-PEDVKLYQFMGKDNVP 489

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH + +P   L  N        + +  ++ ++G K SKS G  +      +  +     R
Sbjct: 490 FHTVVFPGSQLGTNDEWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAQDSGISPSVWR 549

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L        D  +  D    R N++L   +GN V+R +  +   Y+G+IP        
Sbjct: 550 YYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRIIKFVNAKYNGVIPKFDTKNLP 609

Query: 387 D-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           + +S++S  + +L+   + M+     R L   +SL +  +++    K    L   +P+++
Sbjct: 610 NYDSLVSDINEILRNYVKEMETAHERRGLEIAMSLSARGNQFLQENKLDNSLFSQHPEKS 669

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + ++  +A L+  F+P+ A  I  +L         +     L  G  ++K  +
Sbjct: 670 DAVVGVGLNIVYAVASLIYPFMPETAETINRMLNAPALKID-EEFHIALLGGHNINKA-E 727

Query: 505 PIFPRF 510
            +F R 
Sbjct: 728 YLFQRI 733


>gi|82523741|emb|CAI78741.1| EMAP domain protein [uncultured gamma proteobacterium]
          Length = 646

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 121/515 (23%), Positives = 224/515 (43%), Gaps = 46/515 (8%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
             D+  RF R  G   L+    D HG  I   A+  G+T +  +D   +     +    I
Sbjct: 2   QTDIWVRFQRSRGHHCLYVCADDAHGTAIMLTAEKLGITPEQQIDTIRQEHMQDSAGFLI 61

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-------- 141
            +D+F  T  + +   C  +++ + D G I     +  +    + +  D  +        
Sbjct: 62  GFDNFHTTHSEENRFWCETVYQCLRDNGHIASRAITQAFDPEKQLFLADRFIKGTCPRCK 121

Query: 142 ---YKGADGQYYNAQHNPVQWM--------------EEEGYFFRLSAYQDKLLSYYESHP 184
                G + +   A ++P   +              E   +FF+L  ++D L ++ +S+ 
Sbjct: 122 TPDQYGDNCEACGATYSPTDLINPVSAISGATPVEKESTHFFFKLPEFEDMLRNWLDSNT 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL-TTTG 243
                 +  N++  ++++GL++  +SR    +G +IP +P    YVW+DA   Y+ +   
Sbjct: 182 M---QDQVANKLREWLEAGLQEWDISRDAPYFGFEIPGEPGKYFYVWLDAPIGYIASFQN 238

Query: 244 YLDNPDGSKAKFWP-----ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           Y D    +   +W         H IGKDI+ FH ++WPA L S+ L  P  +++HGF+  
Sbjct: 239 YCDRTGHNFDDYWRLGSDCELYHFIGKDIINFHGLFWPAMLHSSGLRAPTAIYAHGFLTV 298

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANG 357
            G K+SKS G  I     ++ +  + LRY+   +  A   D   + +   +RVN+D+   
Sbjct: 299 NGTKMSKSRGTFIKAGTYLKYLDAEYLRYYFAAKLNASVDDIDLNLEDFVQRVNSDVVGK 358

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N+ SR    + K +D  +    + T +++++++      + I    + +  ++AL ++
Sbjct: 359 VVNIASRCAGFLHKSFDNRL----SGTCAEQALVTSFIAAGEAIAGLFEEREFNKALREI 414

Query: 418 ISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++L    ++Y D +KPW L K          V  V V + R L   L+  +P +A K   
Sbjct: 415 MALADRANQYIDEKKPWILAKQENSEQEVHDVCSVGVNLFRVLMTYLKPVLPAMAEKAEA 474

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            L        +  LD  L  G  L  TF P+  R 
Sbjct: 475 FLNCP---LNWTDLDAPLV-GHQL-ATFSPLMTRI 504


>gi|260948078|ref|XP_002618336.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720]
 gi|238848208|gb|EEQ37672.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720]
          Length = 569

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 185/527 (35%), Positives = 275/527 (52%), Gaps = 50/527 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GLDVLFTTGTDEHGQKIAK 60
           K    +Y++T I Y NA+PH+GH Y M++ D   R+  L  G   +F TGTDEHG KI  
Sbjct: 17  KSNGTVYVTTPIFYVNARPHLGHLYSMLLGDTRVRWENLKPGQKTMFLTGTDEHGLKIQA 76

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  MA+ +++ YD FIRTT+  H       W    +KG IY
Sbjct: 77  VAEKEGIDPKVLVDRVSQNFVQMAEAVNVKYDRFIRTTDNDHVKAVEHFWNAAMEKGLIY 136

Query: 121 KGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           KG +SGWYS+ DEA+Y   +V        G   +      N V + EEE YFFRLSA++D
Sbjct: 137 KGSHSGWYSVSDEAFYPPSQVEDIIDAKTGQPKKVSIETRNEVVFQEEENYFFRLSAFKD 196

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFD--WGIKIPDDPQYIMYVW 231
           KL+ + E +P F+ P  + +E+++ ++   L DLS+SR ++   WGI +P+D    +YVW
Sbjct: 197 KLIDFLEKNPSFVQPSRKYHELLTELRQEELSDLSVSRPSWRLKWGITVPNDDSQKIYVW 256

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
            DAL NYLT  GY           WP  +H++GKDI+RFH IYWP FL++A + LPK+V 
Sbjct: 257 FDALINYLTAAGYPQQDMP----IWPP-IHIVGKDIMRFHCIYWPIFLMAAGIELPKQVI 311

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            H   L  G K+SKSLGNV++PIE+ +    + LR +L+ +   G D  + +  L     
Sbjct: 312 VHSHWLCDGFKMSKSLGNVVEPIELAQYYDPEPLRIYLMEQSNLGTDCNFSEAALHN-HR 370

Query: 352 ADLANGIGNLVSR-------SVSMILKDYDGMIPTPGAFTESD-------------ESIL 391
           + L N   N+VSR           +   +DG         + D             +S++
Sbjct: 371 SKLINKWANIVSRIGGDKFDVEQSVQDFFDGKYSDITEMIKRDAVVEAPDQVLLARDSLV 430

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-------TNPDRA 444
           S  S +  E+  +MQ     +AL +    V   + +F   +PW   K        + D  
Sbjct: 431 SSISSLFSEMDSSMQEFGQMKALHRWWETVELANVFFQTAQPWVYSKKLTQTQDADADAV 490

Query: 445 ST-------VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +        ++++T E +R   I +  F+PK A+ + D L V DE R
Sbjct: 491 AEQTTLMNYIIFLTAEAVRLSTICVLPFMPKTASGLLDRLGVPDETR 537


>gi|294659971|ref|XP_002770677.1| DEHA2G20262p [Debaryomyces hansenii CBS767]
 gi|199434371|emb|CAR66009.1| DEHA2G20262p [Debaryomyces hansenii]
          Length = 755

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 117/550 (21%), Positives = 220/550 (40%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G     
Sbjct: 191 ENERNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNALFICGTDEYGTATET 250

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T K   D+  +  +D+ D  DI +D F RTT  +  +  + ++ K+ D G + 
Sbjct: 251 KALEEKITPKQLCDKYHKIHKDVYDWFDIGFDYFGRTTTSQQTEIAQDIFMKLFDNGYLE 310

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +      Y     A+  D  V            +G       +  NP + +         
Sbjct: 311 EKTTEQLYCQEHNAFLADRFVEGTCPKCQYEDARGDQCDKCGSLLNPFELVNPRCKVDNA 370

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R S +    L   E   +                +    S++K GL+   ++R   
Sbjct: 371 KPIPRNSTHIYIKLDDLEPELKAWVEEASEKGAWSKNSKTITNSWLKQGLEPRCITRD-L 429

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD------LHVIGK 265
            WG  +P +     ++YVW DA   Y++ T  Y  +      K W  +         +GK
Sbjct: 430 IWGTPVPLEKFKDKVLYVWFDATIGYVSITANYFKDNKTEDWKKWWRNPENVDLYQFMGK 489

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGV 322
           D + FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  +  
Sbjct: 490 DNVPFHTVVFPASQIGTKDNWTKLHHLNTTEYLQYENGKFSKSRGVGVFGNNAKETNISP 549

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L        D  +       + N++L   +GN V+R V  ++  Y+G++P    
Sbjct: 550 SVWRYYLASVRPESSDSHFSWTEFVTKNNSELLANLGNFVNRLVKFVIAKYNGVVPEFDP 609

Query: 383 FTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D     +  +++L    ENM+   + R L   +S+ S  +++    K    L    
Sbjct: 610 KNIPDYNKFNTEINQLLANYIENMEAVNLRRGLEIAMSISSRGNQFLQDNKLDNNLYTNL 669

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           PD++  V+ V + +I  ++ ++  F+P+   +I  +L     +      +  L+PG  + 
Sbjct: 670 PDKSDAVMGVGLNLIYLVSAIISPFMPECTTQICQVLNAPPLSIT-DKFELVLEPGHCIG 728

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 729 KA-QYLFKRI 737


>gi|146278384|ref|YP_001168543.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|187647761|sp|A4WV24|SYM_RHOS5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145556625|gb|ABP71238.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 572

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 122/555 (21%), Positives = 234/555 (42%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   +V+  +     +++A    +S+D F R++  R+H   +    ++++ G I +   
Sbjct: 63  AGKPVEVYCAEMHEIQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGQLAENGFIEEVSE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              +S+ D  +  D          G D    +   N                       +
Sbjct: 123 RQVFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 VRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LHWGV 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +    Q        + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVKKGDQPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTEADWERWWRTDKGAGDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GAF E +  +++     L      M+   I +A  ++ +L    + Y  +  PW + 
Sbjct: 422 PAGGAFGEREHQLIAELQERLAAYESCMEAMEIRKAATELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           KT+P+RA  ++ +++ +IR  A++ + F+P  A      L   D +      +  +RL  
Sbjct: 482 KTDPERAQAMIRLSLNLIRLYAVISRPFIPDAAASTMASLGCDDWSWPTDVAAALERLPA 541

Query: 496 GFMLHKTFDPIFPRF 510
           G     T D +F + 
Sbjct: 542 GHAFT-TPDVLFRKI 555


>gi|311896408|dbj|BAJ28816.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 569

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 129/552 (23%), Positives = 230/552 (41%), Gaps = 49/552 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AAQ 
Sbjct: 3   RQLITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAQE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F  +     + + D   +S+D F R++  ++ +  + + +++   G I +   
Sbjct: 63  AGLPVAEFCARAHDQQKAIYDGFRLSFDHFGRSSSPQNREITQEIARELQANGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS+ D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSVADGRFLPDRYIVGTCPFCGYDKARGDQCENCTRVLDPTDLLEPRSAISGSAELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S   D++ ++  +H +   P+   +    ++  GL+D +++R   +WG+
Sbjct: 183 VRETKHLFLLQSKLTDEVEAWIAAHGD-DWPVLASSIARKWLTEGLQDRAITRD-LEWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH-------VIG 264
            +P D          + YVW DA   Y+  T    +  G   + W  +          + 
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATREWADATGGDWRSWWYEADDTVRYTEFMA 300

Query: 265 KDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           KD + FH + +PA LL +  P  K   V +  ++ + G K S S    I     +E +  
Sbjct: 301 KDNVPFHTVMFPATLLGSRQPWKKVDYVKAFNWLTYYGGKFSTSQKLGIFTDVALELLPA 360

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RY+L+       D  +  D     VN DLA+ +GN V+R +S   K +   +P    
Sbjct: 361 DYWRYYLMANAPESDDSSFTWDLFAATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAGAP 420

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             +++ ++    + +L E    +      +A   + +L S  + Y D   PW   KT+P+
Sbjct: 421 NGDAETALGEQIAELLAEYEAQLDALNFRKAAQALRALWSAGNSYLDVTAPWTEIKTDPE 480

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ----RLKPGFM 498
            A+  L   + +I   A+L + F+P  A  I D   +AD+ R + S D+     L P   
Sbjct: 481 AAARTLRTAINLIHLYAVLSEPFIPTAARTIRDSFALADDTRTWVSADEARALALVPAGT 540

Query: 499 LHKTFDPIFPRF 510
                  +F + 
Sbjct: 541 GFTVPPVLFAKI 552


>gi|297837631|ref|XP_002886697.1| hypothetical protein ARALYDRAFT_315394 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332538|gb|EFH62956.1| hypothetical protein ARALYDRAFT_315394 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 713

 Score =  302 bits (774), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 114/526 (21%), Positives = 212/526 (40%), Gaps = 34/526 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 15  GKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNTIYICGTDEYGTATETK 74

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T K   D+     + + D  DIS+D F RT+       C+ ++ K+ +   I +
Sbjct: 75  ALEENCTPKEICDKYHAIHQ-VYDWFDISFDKFGRTSTPE-TKVCQEIFNKLWENEWISE 132

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 Y    + +  D  V K   G       +    +    Y  +    +      + 
Sbjct: 133 DTMKQPYCDTCKKFLADRLVCKTTPGFR--DTDHLFLELPLLKYKLKKYIKETSSSGSWS 190

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYL 239
            +         +       K GLK   ++R    WG+ +P +   + + YVW DA   Y+
Sbjct: 191 RNAIQTTDASLKEVPNDSEKDGLKKRCITRD-LKWGVPVPHEKYKEKVFYVWFDAPIGYV 249

Query: 240 TTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPL--PKKVFSHG 294
           + T      +  K    P ++     +GKD + FH + +P   L         K V    
Sbjct: 250 SITS-CYTSEWEKWWKNPENVELYQFMGKDNVFFHTVLFPCTHLGTGEDWTMMKTVSVTD 308

Query: 295 FILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           ++ ++G K S+S G  +   +V +  + V+  RY+L+       D  +  D  +K++N +
Sbjct: 309 YLNYEGGKFSESKGVGVFGNDVKDTNIPVEVWRYYLLTNRPEKSDTTFKWDDFQKKLNHE 368

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L   +GN V   +S I K  +              S+     +++++  + M+   + + 
Sbjct: 369 LLANLGNFVYLVLSFIAKPKNKGGYG---------SLAEYAGKLVEDYVKVMEKVKLKKG 419

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L   + L +E + Y      WEL K +    + V+     ++  LA LL+ F+P  + ++
Sbjct: 420 LHTTMLLSNEGNTYLQDTNFWELYKKDKPSCAVVIRTAAGLVHLLARLLEPFMPSFSREV 479

Query: 474 FDILFVAD---------ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           F  L +           E     SL + L     +  T  P+F + 
Sbjct: 480 FKQLNLPPHFSLSEEKGEVLQASSLWEILPSNHRIG-TPQPLFKKM 524


>gi|300781666|ref|ZP_07091520.1| methionine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533373|gb|EFK54434.1| methionine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 626

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 151/525 (28%), Positives = 229/525 (43%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + +  A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A 
Sbjct: 15  ENVLVCVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGNNVLMVSGTDEHGTPLLVQAD 74

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT K   D+ +R   +    L +SYD F RTT + H+   + L+K + D G + K  
Sbjct: 75  KEGVTVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYDNGYMIKET 134

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEEEGYF 166
             G  S        D  +             G   +            NPV  +  E   
Sbjct: 135 TKGAISPSTGRTLPDRYIEGTCPICGADDARGDQCDNCGNQLDPVDLINPVSKINGETPE 194

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L       +  L   R++   + +K  L  L   R        DWGI +P
Sbjct: 195 FVETEHFMLDLPSLGDALKEWL-EARQDWRPNVLKFSLNLLEDMRPRSMTRDIDWGIPVP 253

Query: 222 -----DDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGKDILR 269
                +DP   +YVW DA+  YL+ +      + +    K +  D      + +GKD + 
Sbjct: 254 VEGWENDPGKKLYVWFDAVIGYLSASIEWAARSGNLDAWKDFWQDPATRGYYFMGKDNIT 313

Query: 270 FHAIYWPA--------------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WP                     L LP +V S  F+   G K S S G VI   +
Sbjct: 314 FHSQIWPGELLGYAGKGTKGGQEHRLGTLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKD 373

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G D LRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 374 FLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAHKNFG- 432

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P PGA+ ESD+ IL + +R   E    +       A+ +++ +V E + Y   Q+PW+
Sbjct: 433 EVPQPGAWNESDQRILDLAARTFGEAGAELGEAHFKNAITKIMHVVGEANAYIAEQEPWK 492

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R STVL+  ++V+     +L  F+P  A K+ + L 
Sbjct: 493 LAKDESQRERLSTVLWTALQVVSDCNAMLTPFLPHTAQKVHETLG 537


>gi|145295063|ref|YP_001137884.1| methionyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|187647715|sp|A4QCN5|SYM_CORGB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|140844983|dbj|BAF53982.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 610

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 152/525 (28%), Positives = 228/525 (43%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 63  KEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKET 122

Query: 124 YSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYF 166
             G  S          Y        G DG   +               NPV  +  E   
Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGETPE 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L          L   R +   + +K  L  L   R        DWGI IP
Sbjct: 183 FVETEHFLLDLPALAEALTEWL-KGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPIP 241

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWP----ADLHVIGKDILR 269
            +         +YVW DA+  Y        Y      +   FW        + +GKD + 
Sbjct: 242 VEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNIT 301

Query: 270 FHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL                 L LP +V S  F+   G K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            ++E G DALRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++  
Sbjct: 362 FLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P PGA  ESD+ IL + +   + +  N+        +++++ +V E + Y   Q+PW+
Sbjct: 421 EVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWK 480

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K +   +R +TVL+  ++V+     +L  ++P  A K+ + L 
Sbjct: 481 LAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLG 525


>gi|119719527|ref|YP_920022.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|187647776|sp|A1RXT9|SYM_THEPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119524647|gb|ABL78019.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 565

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 135/546 (24%), Positives = 241/546 (44%), Gaps = 42/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K R K  +  A  Y    PH+G+    ++ ADV ARF RL G +V+F +G+D HG  I  
Sbjct: 4   KARRKWLVLAAWPYAYGVPHLGNLIGSVLSADVAARFLRLAGDEVVFVSGSDMHGTPIEV 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G + K   ++N    +++ +  +IS+D++ +T    H    +  ++++ + G ++
Sbjct: 64  EALKRGESPKDLAERNHEKIKELFERWEISFDNYSKTESPTHIKFVQDFYRRVYENGYVF 123

Query: 121 KGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQWMEEE------------ 163
                 +Y  +D+ +  D        Y G D  Y +   N  + +E              
Sbjct: 124 SDTVQLYYCPKDKIFLPDRYIVGTCPYCGYDRAYGDQCENCGRLLEPTLLLNPRCAICGS 183

Query: 164 GYFFRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               R + +    L       +        LP   RN  +  ++ GLK  +L+R    WG
Sbjct: 184 TPELRTTTHWFFDLPKLTDALKRYIEENENLPPNARNMSLQILRDGLKPRALTRDN-KWG 242

Query: 218 IK--IPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           I    P      +YVW++A+  Y+  T   +    +  K K +  D     ++ IGKD +
Sbjct: 243 IPAPFPGAEDKTIYVWMEAVLGYISATIEYFASKGEPEKWKEFWLDPETRSVYFIGKDNI 302

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FH +  PA L+++      P  V S  ++L +G K SKS    +   E +E    D  R
Sbjct: 303 PFHTLILPALLIASGEKYVLPWTVASTEYLLFRGLKFSKSRRIGVWIDEALEVFPADYWR 362

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + LV      KD  +  +   + VN DL + IGN V R + ++ + + G+ P P  F + 
Sbjct: 363 FVLVSLRPEQKDMSFTWEEFLRIVNNDLNDNIGNFVHRVLVLVQRKFGGIAPAPLDFADE 422

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D           +E+ E M       AL  ++ L S  + Y + +KPWEL   + + A T
Sbjct: 423 DLKFREEILARSREVAEFMYAFRFKEALTHILWLSSSGNSYLNFRKPWEL---DSESART 479

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFD 504
             ++ +  ++ LAI+L   +P+ + +++ +L   D+  N  +  +++ + PG  L     
Sbjct: 480 PAFLALHAVKALAIMLYPIIPRSSQEMWKLLGYKDDIANHRWHEINEAVPPGQELPSPR- 538

Query: 505 PIFPRF 510
           P+F + 
Sbjct: 539 PLFRKI 544


>gi|330465664|ref|YP_004403407.1| methionyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328808635|gb|AEB42807.1| methionyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 600

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 140/539 (25%), Positives = 233/539 (43%), Gaps = 62/539 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A   G+T 
Sbjct: 8   VAWPYANGPRHIGHVSGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPIQVQADAEGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RTT + H+   + L++ +   G I      G  S
Sbjct: 68  RELADRYNRVIVEDLHGLGLSYDLFTRTTTRNHYAVVQELFEGMYRNGYIVPKTTMGAIS 127

Query: 130 LRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------------WMEEEG 164
                   D  +            +G        Q +P+               ++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYGSARGDQCDNCGNQLDPIDLIDPKSKINGETPKFVETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +F  L A  D L  + ++   +   + R ++ +      L+  +++R   +WG+ IP D 
Sbjct: 188 FFLDLPALADVLRQWLDTREGWRPNVLRFSKNLL---DDLQPRAITRD-LEWGVPIPLDD 243

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------LHVIGKDIL 268
                   +YVW DA+  YL+ +       G      ++W  D         + +GKD +
Sbjct: 244 WRERTDKRIYVWFDAVIGYLSASIEWARRSGDPEAWRRWWSTDGAGKDAQAYYFMGKDNI 303

Query: 269 RFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH++ WPA                    L LP +V S  F+  +G K S S   VI   
Sbjct: 304 VFHSVIWPALLAGYSGEGSRDGEPGQLGRLNLPTEVVSSEFLTMEGRKFSSSRRVVIYVR 363

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E    DALRYF+        D  +      +R N +L  G GNLV+RS+SM  K++ 
Sbjct: 364 DFLERYDADALRYFIAVAGPESNDTDFTWAEFLRRNNDELVAGWGNLVNRSISMAAKNFG 423

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            +    P   TE+DE++L+V       + + +      +A+ + + +V+E ++Y   Q P
Sbjct: 424 QIPAVDPNGLTEADEALLAVARAGFTTVGDLIARHRQKQAIGEAMKVVAEANKYLSDQAP 483

Query: 434 WELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           W+LK   +  R  T+L+V ++V+     LL  F+P  A K+ ++L     +     ++Q
Sbjct: 484 WKLKDEADKPRMGTILHVALQVVSDANTLLTPFLPHSAQKVHELLGGTGVHAPMPVIEQ 542


>gi|84683791|ref|ZP_01011694.1| methionyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668534|gb|EAQ15001.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 585

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 115/555 (20%), Positives = 233/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 16  RVLITSALPYINGIKHLGNLVGSQLPADLYARYMRARGHEVMFICATDEHGTPAELAAAM 75

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G     +  +      ++A    +S+D + R++ +R+H   + L  K+++ G I +   
Sbjct: 76  TGEAVADYCARMHDVQAELAKGFRLSFDHYGRSSSQRNHALTQHLAGKLAENGYIEEVSE 135

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
              YS  D  +  D  +            +G   +    Q +PV  +E            
Sbjct: 136 EQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPVDLIEPRSAISGSTDLE 195

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F + SA +D++ ++ +   ++ +      +       GL+D  ++R   DWGI
Sbjct: 196 VRQTKHLFLKQSAMKDEIDAWIDQKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 254

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLD----NPDGSKAKFWPAD-------- 259
            +             + YVW DA   Y+  T          +    ++W  D        
Sbjct: 255 PVKKGTEDWPGMEGKVFYVWFDAPIEYIAATAEWADATGRSESDWERWWRTDKGADDVRY 314

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 315 VQFMGKDNVPFHTLGFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 374

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  +N DLAN +GN VSR        +   +
Sbjct: 375 EILPADYWRWWLLSHAPENSDAEFTWENFQSSINTDLANVLGNFVSRVTKFCASKFGEAV 434

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G   E++ ++++  +  ++   + M+   + +A  ++ ++ +  + Y     PW + 
Sbjct: 435 PEGGELGEAERALIADLTARIRSYEKQMEAMEVRKAAQELRAIWAVGNEYLQTAAPWTVF 494

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           KT+PD+A  ++ + + +IR  A++   FVP  A K+   +   D +      +    L  
Sbjct: 495 KTDPDQAGAIIRLMLNLIRVYAVISAPFVPDAAAKMLSGMNTLDTDWPDDVDAALAVLPA 554

Query: 496 GFMLHKTFDPIFPRF 510
           G       + +F + 
Sbjct: 555 GHAFT-VPEVLFTKI 568


>gi|68467721|ref|XP_722019.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
 gi|68468040|ref|XP_721859.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
 gi|46443801|gb|EAL03080.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
 gi|46443966|gb|EAL03244.1| likely mitochondrial tRNA methionyl-tRNA synthetase [Candida
           albicans SC5314]
          Length = 577

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 183/544 (33%), Positives = 279/544 (51%), Gaps = 51/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAK 60
           K  +  YI+T I Y NA PHIGH Y M+IAD   ++ +L+   +    TGTDEHG KI  
Sbjct: 15  KSTKPFYITTPICYVNAAPHIGHLYSMLIADTRNKWEKLNPSKESFMLTGTDEHGLKIQS 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  KV VD+ S+NF  +A+  D++YD FIRTT+  H +  R  W  + +KG IY
Sbjct: 75  TAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKGFIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDE----VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              +SGWYS+ DE ++ + +    V  G   +  +   N V + +E  YFF+LS +Q++L
Sbjct: 135 TDTHSGWYSISDETFFPETQIEEVVKNGKAVKISSETKNEVVYQKETNYFFKLSMFQEQL 194

Query: 177 LSYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWID 233
           + + + +PEFI P  R   ++     + L DLS+SR      W I++P+D    +YVW D
Sbjct: 195 IQFLKQNPEFIKPKHRYQFILKELEDTKLPDLSISRPSSRLKWSIEVPNDSTQKIYVWFD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKF-------WPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           AL NYLT T +    +   +KF       WPA  HVIGKDI+RFH IYWP FL++A + L
Sbjct: 255 ALLNYLTATKFPHGFEVQDSKFVTPENSIWPA-THVIGKDIIRFHCIYWPIFLMAAGIEL 313

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK+V  H   L  G K+SKSLGNV+DP+E+ E  GVD +R+FLV       D  + ++ L
Sbjct: 314 PKQVIVHSHWLCDGFKMSKSLGNVVDPMEISEYYGVDPVRFFLVENSNIDDDCKFSEELL 373

Query: 347 KKRVNADLANGIGNLVSR---------------------SVSMILKDYDGMIPTPGAFTE 385
           ++  +A L     NL+SR                     ++  I++ Y     +      
Sbjct: 374 QRSRDAVL-GKYCNLISRIGGKNFSIEEAVKSSASGEFNNIREIIETYTINKDSVEGLLS 432

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-----TN 440
           S   + +  + +  ++     N    RA+    S++++ ++ F + +PW   K       
Sbjct: 433 SSSKLTTDLNDLYNQMDHYFTNFDYIRAIQCWWSVINQANQIFQSAEPWTYVKLINSPET 492

Query: 441 PDRASTVL--------YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P               Y+  E  R  +IL+Q  +P+L+ KI D L V+     F +    
Sbjct: 493 PAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQLSKKILDRLNVSGRTSEFTTFGAD 552

Query: 493 LKPG 496
           L+ G
Sbjct: 553 LQYG 556


>gi|309791194|ref|ZP_07685726.1| methionyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226756|gb|EFO80452.1| methionyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 597

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 135/523 (25%), Positives = 222/523 (42%), Gaps = 48/523 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   H+GH     + +D+ ARF RL G  VL  +GTDEHG  I  AA 
Sbjct: 10  EHILVAVAWPYANGPRHVGHVAGFGVPSDIFARFQRLRGNHVLMVSGTDEHGTPITLAAD 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +    D    L +SYD F RTT + H+   + L++ +  KG I +  
Sbjct: 70  KEGVTPRDIADRYNEVIGDDLRNLGLSYDTFTRTTTQNHYHVTQDLFQTLYHKGYILRQE 129

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
             G +S        D  V            +G        Q +P+  +E        +  
Sbjct: 130 TLGAFSATTGRTLPDRYVEGTCPICGYKDARGDQCDQCGNQLDPIDLIEPRSKVDGSTPI 189

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSG-----------LKDLSLSRKTFDWGIKIP 221
             K   +    P F   +    E     +             LK  S++R   DWG+ IP
Sbjct: 190 FKKTEHFLLDLPAFGEQLRTWIEAQEHWRPNVRSFSLNFIKDLKPRSITRD-LDWGVPIP 248

Query: 222 -----DDPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA----DLHVIGKDILR 269
                D     +YVW DA+  Y               +  ++W        + +GKD + 
Sbjct: 249 LPEYADRDDKRIYVWFDAVIGYLSASIEWAENRGTPDAWREWWQNPQARHYYFMGKDNIV 308

Query: 270 FHAIYWPAFLL-----------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           FH + WP  LL            A L LP  V S  F+  +G+K S S G VI   +V+ 
Sbjct: 309 FHTVIWPGMLLGYGAGGHYGAGRAKLELPYNVVSSEFLTMEGKKFSSSRGVVIYVNDVLS 368

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               DALRYFL       +D  +      +R N +L    GNLV+R+++ + K++   +P
Sbjct: 369 RYDADALRYFLAIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLTNVYKNFG-SVP 427

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            PG  + +D+++++     ++ + + +        L++ + L  +V+ Y   Q+PW++ K
Sbjct: 428 QPGDLSSADQALIAQVEAGIETVGKELDAARFKAGLSEAMRLAGQVNIYLSDQEPWKVIK 487

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + +RA+T+ Y  +  +  L IL   F+P  +  + + L    
Sbjct: 488 QDRERAATIWYTALRCVDTLKILFTPFLPFSSQHLHEYLGYDG 530


>gi|15639785|ref|NP_219235.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026023|ref|YP_001933795.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094408|sp|O83776|SYM_TREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3323103|gb|AAC65761.1| methionyl-tRNA synthetase (metG) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018598|gb|ACD71216.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060156|gb|ADD72891.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 811

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 111/535 (20%), Positives = 217/535 (40%), Gaps = 62/535 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  +    I+ A+ Y N  PH+G+  + + ADV ARF R+ G    F  GTDE+G     
Sbjct: 1   MTRK---LITAALPYVNNVPHLGNLIQGLSADVFARFCRMRGYHTCFVCGTDEYGTASET 57

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++            RD+    D+S+D F RTT   H +  + L++ +  +G I 
Sbjct: 58  RAAEQGLSPAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFIS 117

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHN 155
           +   +  Y L    +  D  +                                   +   
Sbjct: 118 EHESAQAYCLHCARFLADRYLRGTCPHCRNAEARADQCEHCGVLLEPETLLNARCVSCGT 177

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++      +  L A +    S++  ++  +     R  E   ++++GL++ +++R   
Sbjct: 178 APEFRPTRHLYLNLPALEKAYRSWFCTTNHLWTKNAVRMTE--GWLRTGLQERAITRD-L 234

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGY------------LDNPDGSKAKFWPAD- 259
            WG+ +P     Q + YVW DA   Y++ T               D+    K + W  D 
Sbjct: 235 RWGVPVPKAGFEQKVFYVWFDAPVGYISITKCGTEAASSQEGGGTDDGVKEKWQSWWLDQ 294

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH +++P  L+ +        ++ +  ++ ++G K SKSLG  + 
Sbjct: 295 QDVELVQFVGKDNIPFHTLFFPCMLIGSGQRWTMLTRLSATEYLNYEGGKFSKSLGVGVF 354

Query: 313 PIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
             +  E  +  D  R++L+       D  +     ++RVN++L   + NLV+R+++ + +
Sbjct: 355 GSDAKESGIPSDLWRFYLLYHRPEKSDAHFTWHEFQERVNSELIGNLCNLVNRTLTFVAR 414

Query: 372 DYDGMIPTPG-------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            Y G++P             E   ++        + + + M+   +  A  +V +L +  
Sbjct: 415 TYGGVVPAQDGARSTRAQVMEETLALREAVRNTAKRMTDLMEQVQLREAFREVFALSARA 474

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           ++      PW+ +  + +RA  ++     VIR + IL   F+P    +    L V
Sbjct: 475 NKALQDGAPWKTRAQDRERADALMRELCYVIRDVLILAHPFLPWYTQQAARFLGV 529


>gi|19552118|ref|NP_600120.1| methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62389783|ref|YP_225185.1| methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|25009354|sp|Q8NRZ4|SYM_CORGL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21323659|dbj|BAB98286.1| Methionyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325118|emb|CAF19599.1| METHIONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 610

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 152/525 (28%), Positives = 228/525 (43%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 63  KEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKET 122

Query: 124 YSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYF 166
             G  S          Y        G DG   +               NPV  +  E   
Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGETPE 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L          L   R +   + +K  L  L   R        DWGI IP
Sbjct: 183 FVETEHFLLDLPALAEALTEWL-KGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPIP 241

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWP----ADLHVIGKDILR 269
            +         +YVW DA+  Y        Y      +   FW        + +GKD + 
Sbjct: 242 VEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNIT 301

Query: 270 FHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL                 L LP +V S  F+   G K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            ++E G DALRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++  
Sbjct: 362 FLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P PGA  ESD+ IL + +   + +  N+        +++++ +V E + Y   Q+PW+
Sbjct: 421 EVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWK 480

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K +   +R +TVL+  ++V+     +L  ++P  A K+ + L 
Sbjct: 481 LAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLG 525


>gi|283456940|ref|YP_003361504.1| methionyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283103574|gb|ADB10680.1| MetG Methionyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 615

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 144/540 (26%), Positives = 234/540 (43%), Gaps = 53/540 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GV+ 
Sbjct: 3   VAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKEGVSA 62

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   ++ +R        L +SYD F RTT   H    + L+ +  + G IYKG      S
Sbjct: 63  QELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKGTQKVAIS 122

Query: 130 LRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFRLSAY 172
                     Y        G+DG   +               NPV  +  E   F  + +
Sbjct: 123 PSTGRTLPDRYIEGTCPICGSDGARGDQCDTCGNELDPDELINPVSKINGETPRFEETEH 182

Query: 173 QDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP-----DD 223
               L    E++  ++   E     +     GL      R   +  DWGI IP     D+
Sbjct: 183 FFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPIPVAGWIDN 242

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPA----DLHVIGKDILRFHAIYWP 276
           P   +YVW DA+  YL+ +       G       +W A      + +GKD + FH+  WP
Sbjct: 243 PNKKLYVWFDAVIGYLSASIEWARRKGEPDAWRAWWNAPTTPGYYFMGKDNITFHSQIWP 302

Query: 277 AFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           + +L+ N              L +P++V +  F+  +G+K S S G VI   +++    V
Sbjct: 303 SEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILSRYPV 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPG 381
           DA+RY++        D  +      +  N +LA   GNLV+R  +++ K++  +      
Sbjct: 363 DAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNKNFGEIPALDEA 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           + T+ D ++L+  +     I   ++N     AL++ + +V ++++Y  A +PW++ K NP
Sbjct: 423 SMTDEDRALLAETAGAFDSIGSLIENHRQKNALSEAMRVVGDINKYISATEPWKI-KDNP 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPGFM 498
            R  TVL+V  + +     LL  F+P  A K+++ L           L++     KPGFM
Sbjct: 482 ARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRLEEVEDLDKPGFM 541


>gi|312074907|ref|XP_003140180.1| hypothetical protein LOAG_04595 [Loa loa]
 gi|307764654|gb|EFO23888.1| hypothetical protein LOAG_04595 [Loa loa]
          Length = 583

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 117/549 (21%), Positives = 228/549 (41%), Gaps = 49/549 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ AD  +R+  L G   LF  GTDE+G    + A 
Sbjct: 7   KNILITSALPYVNNVPHLGNIIGCVLSADAFSRYCYLKGWRRLFICGTDEYGTATERKAV 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+       +    +I +D F RTT +   +  + ++ K+   G      
Sbjct: 67  QEGLTPRQICDKYHAIHAKIYKWFNIDFDRFGRTTTQHQTELTQEIFLKLHKNGFTSTDV 126

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               +      +  D  V+           +G          N V+ +       + +  
Sbjct: 127 VDQLHCDNCNRFLADRFVFGECPYCHFDDARGDQCDACGKLINAVEIINPRCDLCKATPV 186

Query: 173 QDK-----------------LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                                L+   S  +        +   S++K GL+   ++R    
Sbjct: 187 VKPSSHIFLHLDKLAGEVEKHLNKQLSSGKNHWSANAISIAKSWLKGGLERRCITRD-LK 245

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--ADLH-VIGK----- 265
           WG+ +P D     + YVW DA   YL+ T      D S+    P   DL+  +GK     
Sbjct: 246 WGVPVPIDSFSNKVFYVWFDAPIGYLSITKEYLGEDWSQWWKNPSIVDLYNFVGKTIFPF 305

Query: 266 -DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVG 321
            D + FHA+ +PA  +    N  +  ++ +  ++ ++  K SKS G  +         + 
Sbjct: 306 HDNVAFHAVMFPATQIGTGDNYTMVNRLCATEYLNYESTKFSKSRGTGVFGDMAAETGID 365

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L+      +D  +  D    +VN +L N +GN V+R++  + K ++G++P   
Sbjct: 366 ADIWRFYLLYIRPETQDTSFSWDDFSLKVNTELLNNLGNFVNRALMFLSKYFNGVVPD-M 424

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E D+++L+  +  L +    + +  +   + +V+S+    + Y  + +PW L K N 
Sbjct: 425 YLEEEDKALLAQVASDLNDFDSCLSSVKLRDGIVKVLSISRHGNLYMQSTQPWVLLKGNE 484

Query: 442 D---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           +   RA TV+ V   +   +A+++  ++P ++ KI +           ++    LKPG  
Sbjct: 485 NDRRRAGTVIGVVANLTYLIAVMIYPYMPSISEKIREHCGHPTLALLPRTPIAFLKPGHK 544

Query: 499 LHKTFDPIF 507
           + +   P+F
Sbjct: 545 IGEP-KPLF 552


>gi|86136378|ref|ZP_01054957.1| methionyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85827252|gb|EAQ47448.1| methionyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 575

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 120/560 (21%), Positives = 230/560 (41%), Gaps = 52/560 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    ++ I++AI Y N   H+G+     + AD+ ARF R  G +V+F   TDEHG    
Sbjct: 1   MDGMARILITSAIPYINGIKHLGNLVGSQLPADLYARFQRATGNEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG   + F  +      D+A    +S+D F R++  ++H   +    K+++ G I
Sbjct: 61  LAAAKAGQPVEEFCAEMHEVQADIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------ 162
            +   S  YS  D  +  D  V            +G   +    Q +P   +        
Sbjct: 121 REVDDSQIYSHADGRFLPDRYVEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISG 180

Query: 163 ---------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    +  F   S  +D+L ++  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRATKHLFLCQSQMKDQLDAWINSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKIPDD-------PQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD--- 259
            DWGI +             + YVW DA   Y+             D    ++W  D   
Sbjct: 240 LDWGIPVKKGTEDWPGMEGKVFYVWFDAPIEYIAAAGEWAEANGKTDADWQRWWRTDMGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  I 
Sbjct: 300 DDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGIF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWEQFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P    +   ++++++  +  ++   ++M+N  + ++  ++ ++    + Y  +  
Sbjct: 420 FGEAVPESAPYGAPEQALIADLTSRIRAYEQHMENMEVRKSAQELRAIWVAGNEYLQSTA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLD 490
           PW   KT+P  A+T + + + +IR  A+L   F+P  +  +   L   D +     ++  
Sbjct: 480 PWATFKTDPQLAATQVRLGLNLIRLYAVLSSPFIPNASEVLMQALNCDDRSWPKDVEAAL 539

Query: 491 QRLKPGFMLHKTFDPIFPRF 510
             L  G       + +F + 
Sbjct: 540 SALPVGHAF-SVPENLFAKI 558


>gi|147918827|ref|YP_687447.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121690214|sp|Q0W0H2|SYM_UNCMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110622843|emb|CAJ38121.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 683

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 122/538 (22%), Positives = 213/538 (39%), Gaps = 43/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + + ++  + Y N   HIGH    I AD+  R  R+ G + +F  G+D HG  I   A+ 
Sbjct: 14  KPVLVTCGLPYANGSAHIGHLRTYIPADMFVRTLRMMGQETVFVCGSDAHGTPIIVNAEE 73

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++ +  VD+    F  +     + +D +  T +  +H   + +  ++   G +Y    
Sbjct: 74  QKISPRQLVDKYHVQFDSIFKKCGVIFDRYGNTDDPTNHARTKSIVSELQKNGYVYPKEI 133

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y  + +    D  V                                      +  + 
Sbjct: 134 KVAYCPQCQRGLPDRYVEGVCPYCSSIARGDECDIGCQRHLEPGEILDPKCKVCGSKAEV 193

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +E +FF+LS + D L  Y              N  + + K  LKD  ++R   +WG+K
Sbjct: 194 RTQEHFFFKLSEFGDFLQEYL---NTLHATPNAVNYAMEWAKE-LKDWCITR-NLEWGVK 248

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T  Y      +    W  D   +H IG DI+  H I+W
Sbjct: 249 YPGHEDLVVYVWVDAPIGYIAFTEEYAKAAGKNWEDLWKGDSRIIHFIGGDIIYHHCIFW 308

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A   LP  V + G I    +K SKS G ++   +  +      D LRY+++   
Sbjct: 309 PAMLKGAGYTLPWGVVASGMIKVNDKKFSKSRGYIVWVEDDYLAHGFHPDLLRYYILSYT 368

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  KD  +     + ++N +L    GN V+R ++ I                 D  I S 
Sbjct: 369 SHTKDINFSWTEFQTKINKELVGSYGNFVNRVLTFI------DSKGIDVKGTIDPKISSA 422

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               +  ++  + N    +    +I+L    + YF + +PW+L K NP     VL+  ++
Sbjct: 423 IKTAIDMVKTEIGNYEFKKICDSIITLSDVGNTYFQSHEPWKLIKENPAACENVLFNCIQ 482

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRF 510
           +++ LAIL +  VP+ A +I+ +L           +D  L P           +F + 
Sbjct: 483 IVKALAILSEPTVPEKAKEIWGMLGYDPATLASARIDDALVPYENRPRPKPSILFTKL 540


>gi|300711986|ref|YP_003737800.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125669|gb|ADJ16008.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 692

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 119/535 (22%), Positives = 224/535 (41%), Gaps = 46/535 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D LAR  R  G    F +G+D HG  +A  A+  G+T
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVSGDTLARSLRRLGQQTAFVSGSDMHGTPVAVNAEREGIT 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  +    + +      + +D++  T ++ + +  R   ++  D G +Y+      +
Sbjct: 74  PEEFALEYHEEYAETFPEFGVEFDNYGHTHDETNTELTREFVREWIDNGHVYEKEIQVAW 133

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
               +    D  V            G   +                     NP ++   E
Sbjct: 134 DPEVDQPLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEIEDPTSTLTGNPAEYRTRE 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F RLS +Q+ L  +             +N+   +V+  L+DL ++R   DWGI+ P++
Sbjct: 194 HEFLRLSDFQEYLKGFL---GRLEGTDNAKNQPKEWVEGELQDLCITRD-MDWGIEYPEE 249

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILRFHAI 273
                ++YVW+DA   Y+ +T       G +   W           +HVIG+DI++ H +
Sbjct: 250 GKEDLVLYVWVDAPIEYVASTKQYTERVGEEVFDWAEPWKEGDGELIHVIGRDIIQHHTV 309

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332
           +WP+ L  A+   P+ V + GF+   G+  S S    I   + + E    D LRY+LV  
Sbjct: 310 FWPSMLRGADYNEPRAVMASGFVNLDGKAFSTSRNRAIWADDYLAEGFDPDLLRYYLVTT 369

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +  +  ++RVN +L    GN V RS+    ++++G         +  E + +
Sbjct: 370 GGFQQDVDFSWERFQERVNGELVGNFGNFVYRSLLFAHRNFEGTPSA-----DVSEEVRT 424

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             +  ++  R ++    +  A    I L    + Y    +PW+L   +P+ A+ V+   V
Sbjct: 425 EINAAMEAFRRDLNEYSLREASQAGIRLSRFGNEYIQRNEPWKLVDEDPEEAARVIRDCV 484

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           ++ +  A+LL+  +P  A +++     A+     +  D    P     +  + +F
Sbjct: 485 QLAKAAAVLLEPILPHAAERLWAQFGEAESVHDTRLEDSLEAPPTEFGEP-EALF 538


>gi|150863806|ref|XP_001382407.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
 gi|149385062|gb|ABN64378.2| methionyl-tRNA synthetase, mitochondrial [Scheffersomyces stipitis
           CBS 6054]
          Length = 584

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 179/533 (33%), Positives = 283/533 (53%), Gaps = 52/533 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQ 63
           +  Y+ST I Y NA PH+GH Y M++AD   R+ +LD      F TGTDEHG KI  AA+
Sbjct: 23  KPFYVSTPIFYVNASPHLGHLYSMLLADTRTRWEKLDPKKSAYFLTGTDEHGLKIQTAAE 82

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +G++ K  VD  S+NF+ +A+  ++ YD FIRTT+  H +  +  W  + +KG I++G 
Sbjct: 83  KSGLSPKQLVDSVSQNFKVLAEKFNVDYDRFIRTTDTDHTEVVQFFWNMMMEKGFIHEGS 142

Query: 124 YSGWYSLRDEAYYNDDEVY-----KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +SGWYS+ DE +Y + ++       G      +   + V + EEE YFF+LS +QD+L+S
Sbjct: 143 HSGWYSVSDETFYPETQIEEVVDENGTKKMVSSESRSEVVFQEEENYFFKLSDFQDQLIS 202

Query: 179 YYESHPEFILPIERRNEVISFVKS-GLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
           + E +P+FILP  R  ++++ +K   L DLS+SR      W I++P+DP+  +YVW DAL
Sbjct: 203 FLEKNPKFILPEHRYTQILNILKEAPLPDLSISRPSSRLKWSIEVPNDPEQKIYVWFDAL 262

Query: 236 TNYLTTTGYLDNPDGSK-------AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288
            NYLT TGY                  WPA  H++GKDI++FH IYWP FLL+A + LPK
Sbjct: 263 LNYLTATGYPQTFPVENNRFVTSPENPWPA-THIVGKDIIKFHTIYWPIFLLAAGIELPK 321

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +V  H   L  G K+SKSLGNV+DP +++E  G DA+R+FL+       D  Y ++ L +
Sbjct: 322 QVIVHAHWLSDGFKMSKSLGNVVDPFDILEYYGEDAVRFFLMENSNIQDDCKYREELLHQ 381

Query: 349 RVNADLANGIGNLVSRS---------------------VSMILKDYDGMIPTPGAFTESD 387
              A +     NL+SR                      V  ++ +         +  E+ 
Sbjct: 382 TREA-IIGKYANLMSRCGNSKFDIRQSVEDWRNGRFSDVDTLINEQALNKDQTQSIIEAR 440

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-------TN 440
           +++++  + +   +   + +    RA+    + V   ++ F   +PW   K       ++
Sbjct: 441 DNLVASLNGLYTNMDSKLADFDHSRAIQNWWTAVYYGNQLFQLSEPWLYTKLLKDTAVSD 500

Query: 441 PDR------ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            D+       +  +++  E +R  +IL+   VP+L+ KI D L VA   R  +
Sbjct: 501 ADKESYRILQNYFVFLAAETVRITSILITPIVPRLSEKILDRLSVASGARNSE 553


>gi|259416472|ref|ZP_05740392.1| methionyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259347911|gb|EEW59688.1| methionyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 573

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/531 (21%), Positives = 228/531 (42%), Gaps = 51/531 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+     + AD+ AR++R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGNEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D + R++  ++H   +    K+ + G I +   
Sbjct: 63  AGKPVADYCAEMHEVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  D  +  D  +            +G   +    Q +P                +
Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F R S+ +D+L  + +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLFLRQSSMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD-------- 259
            +             + YVW DA   Y+             D    ++W  D        
Sbjct: 242 AVKKGTEDWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKSDADWERWWRTDKGADDVKY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA LL +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPSDYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEQV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  GA+ E +++++   S  +     +M+   + ++  ++ ++    + Y  +  PW + 
Sbjct: 422 PEGGAWGEQEQALIEELSTRIGAYERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           K +P+RA+  + + + +IR  A+L   F+P  ++++F+ L    E+R +  
Sbjct: 482 KEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFEALG--SEDRDWPE 530


>gi|158317640|ref|YP_001510148.1| methionyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113045|gb|ABW15242.1| methionyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 565

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 235/543 (43%), Gaps = 45/543 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + ++ A  Y N  PH+GH A   + AD+ AR+ R+ G  VL  +G+D HG  I   A 
Sbjct: 17  RPVLVAVAWPYANGAPHLGHIAGAYLPADIFARYQRMAGNRVLMVSGSDAHGTPITVRAD 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +  VD+    F  +   L IS+D F  T    H    + ++ ++ + G IY   
Sbjct: 77  EEGVSPQEIVDRYHPEFLRIWSELGISFDLFTSTRTDNHSAVAQDVFTRLREAGYIYAKE 136

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP--------------VQ 158
            S +Y      +  D  V            +G   +      +P               +
Sbjct: 137 TSQFYDPDAGRFLPDRYVVGTCPHCSYQQARGDQCENCGRTLDPELLIDPRSKVTGAVPE 196

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +   +F RLS+  D+LL + ++   +       N  + FVK GL D +++R   DWG+
Sbjct: 197 MRQTTHFFLRLSSLADQLLDWLQTRQGWR--RHVLNWSVQFVKDGLHDRAITRD-LDWGV 253

Query: 219 KIPDD---PQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVIGKDIL 268
            +P D   P   +YVW +A+  YL+ +      + D    + W  D      + +GKD +
Sbjct: 254 PLPTDELGPGKRLYVWFEAVIGYLSASKEWAAASGDPEAWRAWWEDPEAAAYYFVGKDNI 313

Query: 269 RFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            FH + WPA L+    L LP  V ++ ++   G K SKS G      E ++ +  DALR+
Sbjct: 314 PFHTVIWPAMLIGYGGLNLPTDVPANQYVTFGGAKASKSAGIGRGVREYLDLLQPDALRF 373

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L   +    D       + +RVN +L    GNLV+R ++ I K +DG +P  G      
Sbjct: 374 ALASVLPEQNDTEISDADIIRRVNDELIANWGNLVNRVLAQINKFFDGELPETGELDGVH 433

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            ++L      L  + E +       AL   + + +EV+ Y   ++PW+  K +   A+  
Sbjct: 434 AALLDSVDAGLVRVGELLGKVEQRAALRAAMEISAEVNAYLYREEPWKTVKVDRAAAARS 493

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           L V+++ I  +   L  F+P  ++++ ++L +          ++R  P          +F
Sbjct: 494 LAVSIQAISGITTALAPFLPFSSDRVAEVLGID-----LDGWERRPVPAGRRLAWSGGLF 548

Query: 508 PRF 510
            + 
Sbjct: 549 TKL 551


>gi|153005950|ref|YP_001380275.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5]
 gi|152029523|gb|ABS27291.1| tRNA synthetase class I (M) [Anaeromyxobacter sp. Fw109-5]
          Length = 524

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 181/519 (34%), Positives = 271/519 (52%), Gaps = 18/519 (3%)

Query: 1   MKE--REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M +  +E  Y++T+I Y NA PH+G A E+ +AD  AR  R  G  V F TGTD+H  K 
Sbjct: 1   MTDAAQETSYVTTSIPYVNANPHLGFALELCVADAFARHRRARGRRVRFVTGTDDHSLKN 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG 117
             AA+ AGV T  +V  ++  F  +   L IS ++F RT+    H    R LW+  + +G
Sbjct: 61  VIAAERAGVPTAQWVADHAAAFEALNGALGISANEFQRTSASPAHGPAVRALWEACARRG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           D+Y+  Y G Y +  E +Y  +E+  G           P++ +EE  +FFRLS + D + 
Sbjct: 121 DLYRRPYRGQYCVGCERFYEPEELANG----RCPEHDAPLETIEETNWFFRLSRHADVVR 176

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDDPQYIMYVWIDA 234
              ES    I+    R E ++F++  ++D+S+SR   +   WG+ +P DP  +++VW DA
Sbjct: 177 EAIESGRLRIVHEGAREETLAFLRGPVRDISVSRSAARARGWGLPVPADPSQVVWVWFDA 236

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           L  YL   GY     G    FW  D   +HVIGK I RFHA+YWPAFL SA LP P  + 
Sbjct: 237 LCGYLAALGYGGIDAGLLDAFWCGDGERVHVIGKGIARFHAVYWPAFLESAGLPWPTDLL 296

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
            HG++  +GEKISKS G  IDP  +I E G DA+RYFL+R I   +DG +     ++  +
Sbjct: 297 VHGYVTVEGEKISKS-GRTIDPAPLIAEYGADAVRYFLLRHIRTARDGDFSIARFRQAHD 355

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A+LANG+GNL SR ++++ K  +G++P PG     DE +     ++  E+ + +    + 
Sbjct: 356 AELANGLGNLASRILALVAKLTNGLVPAPGVELARDEDLRREALKLPSEVDDAVDRLSLD 415

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            AL+ +  LV   +R+     PWE  +      A+  L   +E +  +A  L  F+P  +
Sbjct: 416 GALSAIFRLVDATNRFLTIAAPWEHAREGRAALAAATLRTALEALHVIARELAPFLPATS 475

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             +   L         Q     L  G  L K   P+F R
Sbjct: 476 EDLRRRLEAPPLED--QVGWNALPTGRPLSKGP-PLFRR 511


>gi|229007362|ref|ZP_04164960.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228753893|gb|EEM03333.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
          Length = 545

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 123/535 (22%), Positives = 223/535 (41%), Gaps = 43/535 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  GV
Sbjct: 5   FIGGAWPYANGSLHLGHVAGLLPGDILARYYRTKGENVLYVSGSDCNGTPIAIRAKQEGV 64

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T K   D     F      L  +YD + RT  + HH+T + ++ ++ ++G IYK      
Sbjct: 65  TAKEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQA 124

Query: 128 YSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEEE 163
           Y      +  D  V       +                             N     E E
Sbjct: 125 YCETCTQFLPDRYVEGVCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184

Query: 164 GYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIKIP 221
            ++F L  +Q ++      +  E             +++ GL+D ++SR       I + 
Sbjct: 185 HFYFALHKFQPQIKDAVAVAKREGAWRDNAIQLTERYLEEGLQDRAVSRDLPIGVPIPVK 244

Query: 222 DDPQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPA 277
                 +YVWI+A+  Y + +  + +       +FW +     +V GKD + FH+I WPA
Sbjct: 245 GYEDKKIYVWIEAVAGYYSASKRWAEETRQDDGEFWSSSARTYYVHGKDNIPFHSIIWPA 304

Query: 278 FLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL       
Sbjct: 305 VLLGIGEKAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTINAPEN 364

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +         N++L    GN V+R++  I K YDG +P        +  +      
Sbjct: 365 RDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGAVPKGH----INLELKERIEE 420

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + + +   ++      A+  +   V   ++YFD Q PW+ ++  P      +Y  V  I 
Sbjct: 421 LYRSVGNAIEQDHFKVAVETIFETVRFANKYFDEQAPWKQREEEPVACEETIYTCVYFIV 480

Query: 457 QLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKPGFMLHKTFDPIFPRF 510
             A LL+ F+P  + ++ ++L + +    C   L +R+           P+F R 
Sbjct: 481 NFAQLLEPFLPFSSERVRNMLAITNTGWKCENILPERISH-------VQPLFERI 528


>gi|313140646|ref|ZP_07802839.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133156|gb|EFR50773.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 620

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 142/544 (26%), Positives = 234/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + L+K+    G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y   +     ADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   +     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTRKGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  +  
Sbjct: 364 RYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D ++L   S    EI   ++      AL   + +V ++++Y  A++PW++ 
Sbjct: 424 LDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYISAEEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  + K+++ L  +        L++     K
Sbjct: 483 KDDEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEALGGSGVFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|14601199|ref|NP_147731.1| methionyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|7388281|sp|Q9YCY3|SYM_AERPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|5104799|dbj|BAA80114.1| methionyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 572

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 134/544 (24%), Positives = 232/544 (42%), Gaps = 42/544 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  +++A  Y N  PH+G     ++ AD+ AR+ RL G  V+F +G+DEHG  I   A+ 
Sbjct: 3   KYVVTSAWPYVNHVPHLGTLIGSVLSADIYARYLRLRGRQVVFVSGSDEHGTPIELEARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  K   DQ       M     IS+D++ RT    H +      KK+ + G I+    
Sbjct: 63  KGVHPKELTDQVHEYDVKMWREYRISFDNYSRTESPVHKEFVMEFMKKLEENGYIFSQEE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              Y  RD+ +  D  V            +G          +P +              +
Sbjct: 123 VLPYCERDKIFLPDRFVEGTCPYCGYEKARGDQCDECGRLLHPTELKNPRCALCGSKPVY 182

Query: 168 RLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + + +    L   +            L    +   I++V  GLK  S++R    WG+  P
Sbjct: 183 KSTRHWFIDLRRVQDRLLKWLESHGELQDSVKKYSINWVAQGLKPRSVTRD-LSWGVPAP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPAD-----LHVIGKDILRFH 271
                   +YVW DAL  Y++ T  L         + K W  D     ++ IGKD + FH
Sbjct: 242 FKGAEGKTIYVWFDALLGYVSATKELFIMRRGDPEEWKSWWWDSGTRTVYFIGKDNIPFH 301

Query: 272 AIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           AI  PA  L+++ P   P ++ +  +++++G++ SKS    +   E +E    D  R+ L
Sbjct: 302 AIILPALFLASHDPYVLPWRISATEYLMYEGQQFSKSRRIGVWIDEALEIAPADYWRWAL 361

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            R     +D  +      + VN +L + IGN V+R +S++     G+ P P    E  + 
Sbjct: 362 ARMRPEARDTNFTWKEFYRIVNTELNDDIGNFVNRVLSLVRSRMSGVAPEPEDLGE-HQG 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            +    R    + E+++   I RA   ++ +  E + Y +  +PW+L   + +     L 
Sbjct: 421 FVERVRRAAWAVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPWKLLSQDREEGVRALS 480

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLKPGFMLHKTFDPI 506
             +  ++ LA LL  F P  A++++ +L +A    E    + LD+ L  G  +    +P+
Sbjct: 481 AALYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAVWDEWLDRPLPGGARIV-RVEPL 539

Query: 507 FPRF 510
           F + 
Sbjct: 540 FQKL 543


>gi|307173500|gb|EFN64410.1| Methionyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 934

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/548 (21%), Positives = 232/548 (42%), Gaps = 42/548 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + +++A+ Y N  PH+G+    ++ AD+ AR+ R    + L+ +GTDE+G     
Sbjct: 223 KGERNILVTSALPYVNNVPHLGNIIGCVLSADIFARYCRQRNYNTLYISGTDEYGTATEA 282

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +V  D+      D+     I +D F RTT     +  +  + +I  +G + 
Sbjct: 283 KALQEKTTPQVICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQAFFLRIKSQGYVS 342

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                  +    + +              Y+ A G   +   + V  +E      ++   
Sbjct: 343 SETVEQLHCESCDRFLADRFVEGTCPRCKYEDARGDQCDGCSHLVNAVELINPRCKMCNT 402

Query: 173 QDKLLSYYESHPEFILPIERRNEV----------------ISFVKSGLKDLSLSRKTFDW 216
           +  + +  +   +     +R  E                  S+++ GLK   ++R    W
Sbjct: 403 RPVIKNSIQFFLDLPKIEKRLKEYSITVEKEWSSVARAVSKSWLRDGLKPRCITRD-LKW 461

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           GI +P +     + YVW DA   Y++ T           +            + KD + F
Sbjct: 462 GIPVPIEGFENKVFYVWFDAPFGYISITKRYTKEYKKWWQPLQDTKIDLCQFMAKDNVPF 521

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           HAI +PA+LL+A  N  L K + +  ++ ++ +K SKS G  +   +  +  +  D  R+
Sbjct: 522 HAIMFPAYLLAANQNYTLIKYLMATEYLNYEDKKFSKSRGIGVFGTDARDTGIPADVWRF 581

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L       +D  ++   L  + N++L N +GN V+R++    K ++  +P P    E+D
Sbjct: 582 YLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRALVFSEKFFNSTVP-PIEAEEAD 640

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRA 444
            ++L++  R L      M+   +   L  ++++    ++Y   Q+PW   K    N  RA
Sbjct: 641 WTVLALAQRELSCYINAMEQAKLRDGLKYILAISKHGNQYMQFQQPWVKVKGTDDNKKRA 700

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKT 502
            TV+ +   +   L+ LL  F+P  A ++   L +++++  +  +++   L     + K 
Sbjct: 701 GTVIAICCNLACLLSALLAPFMPSTAKQLRSQLGLSNKSYGYIPETITNMLPTWHKIGKP 760

Query: 503 FDPIFPRF 510
            +P+F + 
Sbjct: 761 -NPLFTKI 767


>gi|327277846|ref|XP_003223674.1| PREDICTED: LOW QUALITY PROTEIN: methionyl-tRNA synthetase,
           cytoplasmic-like [Anolis carolinensis]
          Length = 908

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/549 (21%), Positives = 220/549 (40%), Gaps = 43/549 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  + + I++A+ Y N  PH+G+    ++ AD  AR+ RL   + L+  GTDE+G    
Sbjct: 267 VEGMKNVLITSALPYVNNVPHLGNIIGCVLSADTFARYCRLRNWNTLYLCGTDEYGTATE 326

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+       +    +IS+D F RTT  +     + ++  +  +  +
Sbjct: 327 TKAMEEGLTPQQICDKYYAVHDQIYKWFNISFDFFGRTTTTQQTTIAQDIFHCLLKRNFL 386

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEE 162
                      + E +  D  V             G   +             PV  + +
Sbjct: 387 LTETVDQLKCEKCERFLADRFVEGTCPFCNYEEARGDQCDKCGKLINATELKKPVCKVCQ 446

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R S +    L   E   E                R    S+++ GLK   ++R  
Sbjct: 447 GTPVVRSSQHLFLDLPKLEESLEKWLALSQSTGDWTPNARYIARSWIRDGLKPRCITRD- 505

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDIL 268
             WG  +P D     + YVW DA   YL+      +      K  P  +     + KD +
Sbjct: 506 LKWGTPVPLDGFRDKVFYVWFDAPIGYLSIAANYTDQWEKWWKN-PEQVQLYNFMAKDNV 564

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P  LL       L   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 565 PFHSVVFPCTLLGTGDKYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAKDTGIPSDIW 624

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R++L+      +D  +    L  + N++L N +GN ++R+ S + K + G +P      +
Sbjct: 625 RFYLLYLRPESQDSAFSWTDLMTKNNSELLNTLGNFINRAGSFVCKFFGGHVPA-MELNQ 683

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPD 442
            D+ +L+  +  L++    ++   I  AL  ++++    + Y    +PW+  K    +  
Sbjct: 684 DDKRLLAHITLELRQYNYLLEKVKIREALRSILNMARHGNHYLQVNEPWKHIKGSEADKK 743

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKPGFMLHK 501
           RA TV+ V V +   L+++LQ ++P ++  I   L +  + N         L  G  +  
Sbjct: 744 RAGTVIGVAVNIASLLSVVLQPYMPNVSATIQQQLSIPADYNVVSNDFVCTLPAGHQIG- 802

Query: 502 TFDPIFPRF 510
           T  P+F + 
Sbjct: 803 TVTPLFQKL 811


>gi|311065111|ref|YP_003971837.1| methionyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310867431|gb|ADP36800.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 620

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 142/544 (26%), Positives = 234/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + L+K+    G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y   +     ADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   +     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTRKGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  +  
Sbjct: 364 RYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D ++L   S    EI   ++      AL   + +V ++++Y  A++PW++ 
Sbjct: 424 LDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYISAEEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  + K+++ L  +        L++     K
Sbjct: 483 KDDEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEALGGSGVFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|257057215|ref|YP_003135047.1| methionyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256587087|gb|ACU98220.1| methionyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 595

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 147/537 (27%), Positives = 227/537 (42%), Gaps = 56/537 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A+  G+T 
Sbjct: 5   VAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNKVLMVSGTDEHGTPIQVQAEKEGLTP 64

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RT+   H    + ++  +   G +     +G  S
Sbjct: 65  QQAADKYTRQITEDLQGLGMSYDLFTRTSTGNHAKVVQEIFLALYRNGYVVPMTTTGAIS 124

Query: 130 LRDE-----AYYNDDEVYKGADGQYYNAQ------------HNPVQWMEEEGYFFRLSAY 172
                     Y        G DG   +               NP   +  E   F  + +
Sbjct: 125 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDATELRNPRSRINGETPKFVETEH 184

Query: 173 QDKLLSYYESHPEFIL---PIERRN--EVISFVKSGLKDLSLSRKTFDWGIKIPDD---- 223
               L  +       L      R N       +   ++   ++R   DWG+KIP D    
Sbjct: 185 LFLDLPAFTETLGRWLSTKTEWRPNVLNFTRNLVEDMRPRPITRD-LDWGVKIPLDGWRD 243

Query: 224 -PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P    YVW DA+  Y + +        D    + W  +      + +GKD + FHA  W
Sbjct: 244 QPMKRFYVWFDAVIGYFSASVEWARRLGDPDAWQQWWNNPDARGYYFMGKDNITFHAQIW 303

Query: 276 PAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA LL  N              L LP ++ S  F+   G K S S G VI   + + E G
Sbjct: 304 PALLLGHNGEGDKGGGPGPYGKLRLPDEIVSSEFLTMSGSKFSTSRGTVIYVHDFLREFG 363

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LRYF+       +D  +  D   +R+N +LAN  GNLV+RS+SM  K+ +G IP PG
Sbjct: 364 PDTLRYFISVAGPETQDTDFTWDEFVRRINFELANEWGNLVNRSISMAHKN-NGGIPRPG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             T++DE + ++       +  ++       A  + + +VS  ++Y   Q+PW+L K +P
Sbjct: 423 TPTQADEDLKALAKAAFDTVGGHLSRSRFKLAAQEAMRVVSAANKYLSDQQPWKL-KDDP 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----VADENRCFQSLDQRLK 494
           +R  TVL+  ++V+     LL  F+P  A K+ + L      A +   F+  D  L 
Sbjct: 482 ERRDTVLHTALQVVSDANTLLTPFLPHAAQKVHEALGGTGVWAAQPELFEVADLDLP 538


>gi|99038317|gb|ABF64929.1| methionyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 576

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 117/536 (21%), Positives = 228/536 (42%), Gaps = 51/536 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  ++ I++A+ Y N   H+G+     + AD+ AR++R  G +V+F   TDEHG    
Sbjct: 1   MDDMARILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +      D+A    +S+D + R++  ++H   +    K+ + G I
Sbjct: 61  LAAAKAGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV----------- 157
            +      YS  D  +  D  +            +G   +    Q +P            
Sbjct: 121 TEVSEKQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISG 180

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               +  E +  F R SA +D+L  + +S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLFLRQSAMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD- 239

Query: 214 FDWGIKIPDD-------PQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD--- 259
            DWGI +             + YVW DA   Y+             D    ++W  D   
Sbjct: 240 LDWGIAVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGA 299

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA LL +  P      + S  ++ + G + S S G  + 
Sbjct: 300 DDVKYVQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 360 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P  G + E +++++   S  +     +M+   + ++  ++ ++    + Y  +  
Sbjct: 420 FGEEVPDGGTWGEQEQTLIEELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAA 479

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           PW + K +P+RA+  + + + +IR  A+L   F+P  ++++F  L    E+R +  
Sbjct: 480 PWSVFKEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGT--EDRSWPE 533


>gi|126459772|ref|YP_001056050.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|187647758|sp|A3MVB7|SYM_PYRCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|126249493|gb|ABO08584.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 570

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 132/537 (24%), Positives = 228/537 (42%), Gaps = 38/537 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ RL G DV+F +G+D HG  I   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +      ++    +IS+D +  T  + H    +  +K+I + G I+    
Sbjct: 63  LGVDPAEYAFKMHGVVAELFKRWNISFDLYTHTHSETHVAFVQEFFKRIYENGYIFTKDE 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  RD+ +  D            E  +G   +      +P Q +E            
Sbjct: 123 EMPYCPRDKIFLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLVEPRCAVCGSKPEW 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-- 219
                +Y                   LP   +   ++ +K GLK  +++R    WGI   
Sbjct: 183 RLTRHWYLDLRRLEDKIRKYVEENPHLPQNAKEMSLAMLKEGLKPRAVTRDN-KWGIPAP 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
            P      +YVW +A+  Y++            S+ + +  D     +  +GKD + FH 
Sbjct: 242 FPGAEGKTIYVWFEAVLGYISAVVEHFKRLGKESEWEKYWRDPDTKIIFFVGKDNIPFHV 301

Query: 273 IYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I  PA LL+      LP    S  ++L++G+K SKS    I   E +  +  D  R+ LV
Sbjct: 302 IILPALLLANGGGYTLPTTTASTEYLLYEGDKFSKSRRWGIWIDEALHLLPADYWRFILV 361

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +      + VN  L + +GN V+R +S I     G++P PG   E D+S 
Sbjct: 362 YIRPENRDTSFTWAQALEIVNKVLNDDVGNYVNRVLSFIKSRMGGVVPPPGTPQEEDKSF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L    ++ ++   + +   +  AL  V+ +  E +RY +A+ PW+L KT P+ A+ V+Y 
Sbjct: 422 LQAALQLFKKAERHYEAVELKDALHTVVEIAREGNRYLNARAPWDLLKTRPEEANAVMYH 481

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               ++ LA  L   +P+   K+++++     +  +    +   PG  L +   P+F
Sbjct: 482 AYWSLKMLAAGLAPVIPESVEKMWEMMGRPA-SLTWDEALREPAPGVKLGE-VKPLF 536


>gi|317482648|ref|ZP_07941662.1| tRNA synthetase class I [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915894|gb|EFV37302.1| tRNA synthetase class I [Bifidobacterium sp. 12_1_47BFAA]
          Length = 621

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 231/544 (42%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQ 123

Query: 126 G-----------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFR 168
                          +  E      E  +G        +       NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L       +  L   +     +     GL      R   +  DWGI +P   
Sbjct: 184 QTEHYFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPP 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  A K+++ L           L +     K
Sbjct: 483 KDDQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|149918382|ref|ZP_01906873.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820908|gb|EDM80317.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 600

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 136/545 (24%), Positives = 230/545 (42%), Gaps = 44/545 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I  DV  R  ++ G  V+F   +D HG  +   A+ 
Sbjct: 3   KKVLVTAALPYANGSIHLGHMLEAIQTDVYVRARKMGGERVVFMWASDTHGTPVQVRARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +  + +         D   I YD F  T    + +    +++ +  +GDI     
Sbjct: 63  EGIEPEALIAKAYEEHVAAYDGFGIGYDIFHTTHSDENREHAGAIFEALRARGDIEVREV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              YS  D+ +  D  V             G       A + P + ++            
Sbjct: 123 EQLYSEVDQMFLPDRLVKGTCPVCKTPDQYGDSCDNCGATYRPTELIDPYSSVSGDKPVL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYES---HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
              E  F  LS +++ L  + +        +L    R  V+ +V  GL+D  +SR+   +
Sbjct: 183 RTSEHLFVPLSRHEEFLREWLKPVSEGGSTVLQDSVRRFVMDWVDKGLRDWDISREAPYF 242

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD--------LHVIGKD 266
           GI+IP  P    YVW DA   Y+  T         +    +W A         +HVIGKD
Sbjct: 243 GIEIPGFPGKYFYVWFDAPIGYIAATDKWCQGKDDESVEGWWKAGAGEDGTEIVHVIGKD 302

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH ++WPA L ++   +P +V +HG++   GEK+SKS G  I     +E V    LR
Sbjct: 303 IVYFHCLFWPAMLNASGYTVPSRVHAHGWLKVNGEKMSKSRGTFILANTYLEHVDPAYLR 362

Query: 327 YFLVREIACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+L   +   +D      +    RVNADL N   NL SRS+  +     G   T G  TE
Sbjct: 363 YYLAARLGNNQDDFDLAMEDFVNRVNADLVNKAANLASRSIKFLHAKLGG---TTGPLTE 419

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
             ++++         +     +     AL   I +    + YF  Q+PW+  K++P+ A 
Sbjct: 420 EGQALVDDARATFAAVPGLYADFDSAAALRVAIEMAEACNNYFSEQEPWKKVKSDPEAAR 479

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V+   V+V + +  +L+  +P+   K+  +L + D    + +    +  G  L   ++ 
Sbjct: 480 AVVSAGVQVSKLIGAILKPVLPEWGAKVERMLKL-DAPLSWANATAPVAEGLELG-PYEV 537

Query: 506 IFPRF 510
           +  R 
Sbjct: 538 LAERL 542


>gi|296455053|ref|YP_003662197.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184485|gb|ADH01367.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 621

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 140/544 (25%), Positives = 232/544 (42%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQ 123

Query: 126 G-----------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFR 168
                          +  E      E  +G        +       NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L       +  L   +     +     GL      R   +  DWGI +P   
Sbjct: 184 QTEHYFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPP 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEDSMTNEDRGLLEETSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R STVL+V  + +     LL  F+P  A K+++ L           L +     K
Sbjct: 483 KDDQARLSTVLHVAAQAVADANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|323451615|gb|EGB07492.1| hypothetical protein AURANDRAFT_71802 [Aureococcus anophagefferens]
          Length = 820

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 171/455 (37%), Positives = 250/455 (54%), Gaps = 17/455 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    Y++TAI Y N  PH+GHAYE ++ DV+AR+ RL G +  F TG DEHGQKIA  A
Sbjct: 101 KDRTFYVTTAINYANGSPHMGHAYEALVTDVVARYWRLWGAETHFLTGADEHGQKIANTA 160

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G      VD+    F+ +   LD+SYDD++RTT +RH   CR LW++ S  GD++  
Sbjct: 161 AKEGKRPIELVDECVAKFKALDARLDVSYDDYLRTTSERHKACCRELWRRCSASGDVFLE 220

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y GWY  R E +    +        + +A   P++   EE YFF+L  Y   + ++  +
Sbjct: 221 RYDGWYDERAECFVKASDAQLQ---NFCDADGIPLKRTSEECYFFKLGKYAPAIRAHVLA 277

Query: 183 HPEFILPIERRNEVISFVKS--GLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNY 238
           +P F+ P  RR EV+  +     ++ LS+SR TFDWG+      D  ++MYVWIDALTNY
Sbjct: 278 NPHFVEPESRRKEVLLMLDDAEDIEKLSISRTTFDWGVGLPEGFDAGHVMYVWIDALTNY 337

Query: 239 LT------TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
           +T            +P    A  WPAD+HVIGKDI+RFHAIYWPAFL+SA LPLP+ VF 
Sbjct: 338 VTGAGGLAEKKAAGDPCLEAAGKWPADIHVIGKDIVRFHAIYWPAFLMSAGLPLPRSVFC 397

Query: 293 HGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           HGF+L   G K+SK+LGNV+DP  +++  G D+ RYF V++ + G D  + +  L    N
Sbjct: 398 HGFVLDAAGTKMSKTLGNVLDPNALLDAHGSDSFRYFCVKDASPGADVKFSETSLILAHN 457

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            +LA+  GNLV R+ +       G +P P A              +  ++ E M+   + 
Sbjct: 458 NELADAFGNLVHRATAFAQSKCGGKVPAPQAVAGLGRPF--DLDALRAQLGEAMEKLDVA 515

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                 ++     +++    +PW++ K +     T
Sbjct: 516 AYAQAAMAAARGCNKWVTDLEPWKM-KDDLAAKRT 549


>gi|217970006|ref|YP_002355240.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507333|gb|ACK54344.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 733

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 122/557 (21%), Positives = 210/557 (37%), Gaps = 69/557 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH    I AD+  R+ R+ G  V +    D HG  +   A+ 
Sbjct: 3   RKLLVTNALPYANGDIHLGHLVGYIQADIWVRYQRMRGHSVHYVCADDTHGTPVMLRAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +++             +++D++  T    +      ++ ++   G I     
Sbjct: 63  EGLTPEQLIERVHGEHLRDFTAFGVAFDNYHSTHSAENRFYAEDIYARLKAGGLIDTRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             +Y    E +  D  +             G + +   A + P +               
Sbjct: 123 EQYYDPVKEMFLPDRFIKGECPKCGAPDQYGDNCEACGAAYAPTELKNPYSAVSGAKPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF--------VKSGLKD 206
              E YFFRLS      +  +      +  E  L +E  N++  +         ++ L D
Sbjct: 183 KTSEHYFFRLSDERAVAFLREWTRGTNAAGERRLQMEAANKMKEWLGENATEEGENTLSD 242

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG---------------YLDNPDGS 251
             +SR    +G +IP  P    YVW+DA   YL +                         
Sbjct: 243 WDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYLASFRNLAAKRAAAGETIAVEDYTDAAR 302

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            A      +H IGKDIL FHA++WPA L  A    P ++  +GF+   G K+SKS G  I
Sbjct: 303 AAAAGTEMVHFIGKDILYFHALFWPAMLKFAGYATPSRLCVNGFLTVDGAKMSKSRGTFI 362

Query: 312 DPI-EVIEEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                + +++  + LRY+   +     +D   + D +  +VN++L     N+ SR    I
Sbjct: 363 TAHSYIAQKLDPEWLRYYFAGKSNGTMEDVDLNLDDMIAKVNSELVGKFVNIASRCAGFI 422

Query: 370 LKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            K +D   G          +              +    + +   RAL +V+ L    ++
Sbjct: 423 GKRFDGRLGEADAAACAEFAAAWSEGR-------VATAFEERDYSRALREVMRLADLANQ 475

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y +  KPWEL +      R  TV    + + R L   L+  +P LA ++   L +     
Sbjct: 476 YVNDHKPWELARQEGQEARLHTVCSTALTMFRDLTRYLKPVLPALAAQVETFLAIP--AM 533

Query: 485 CFQSLDQRLKPGFMLHK 501
            +Q     L  G  +  
Sbjct: 534 DWQGDWAALPAGHAIQA 550


>gi|331243750|ref|XP_003334517.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313507|gb|EFP90098.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 711

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 117/559 (20%), Positives = 228/559 (40%), Gaps = 62/559 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDG--LDVLFTTGTDEHGQK 57
           + +R  + I++A+ Y N  PH+G+     + ADV AR+ R       VL+  GTDE+G  
Sbjct: 31  LSDRPNILITSALPYVNNAPHLGNIIGSTLSADVFARYSRTGPVVAQVLYICGTDEYGTT 90

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
               A   G+T     D+  +  +D     DI +D F RTT  +  + C+ ++  + D G
Sbjct: 91  TETKALEEGMTPSDLCDKYHQIHKDSYQWFDIGFDHFGRTTTPKQTEICQEIFTALYDNG 150

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF------RLSA 171
            + +      Y  +D          +G          + ++ ++++          + S 
Sbjct: 151 HLTEHEIEQVYCEKDARQVLSGSGARGDQCDTCCQTLDAIELIDKKCKICSSTPISKKSK 210

Query: 172 YQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGIKIPD 222
           +    L   +   E      +     S         +++ GL++  L+R    WG+ +P 
Sbjct: 211 HLFIDLPKLQKQIESWYNSAKEGHHWSSNGKAFTEAWLRDGLRERCLTRD-LKWGVPVPI 269

Query: 223 D--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPA 277
                 +MYVW DA   Y + T    + D  K    P ++     +GKD + FH I +PA
Sbjct: 270 KGWEDKVMYVWFDAPIGYPSITA-NYSNDWEKWWKNPKEVTLYQFMGKDNVPFHTILFPA 328

Query: 278 FLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIA 334
           +L+           + +  ++ ++  K SKS    +      E +V  +  RYFL+    
Sbjct: 329 YLMGTGQEWTMLNHISTTEYLQYENVKFSKSNNVGVFGQNARETQVPSEVWRYFLISTRP 388

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-------------- 380
              D  +       + N++L N +GN V+R V      Y  ++P P              
Sbjct: 389 ETNDSQFTWTDFISKANSELLNNLGNFVNRIVKFCNARYHSIVPDPLSWPVVGPPTQSES 448

Query: 381 ------------------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                              +F E D++ +   + +L +  E+M++  + +AL+ V+++ +
Sbjct: 449 ASKEDESSSTTSTQITSRESFDEEDQAFVGDINGLLTQYIESMESLKLRQALSIVMAISA 508

Query: 423 EVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             ++Y    K  + L   +P R + ++ V++ ++  L++L+   +P  +  I   L  A 
Sbjct: 509 RGNQYLQENKIDYSLLLASPRRCAQIVLVSLNLVYLLSVLVYPSMPSTSELILKQLN-AP 567

Query: 482 ENRCFQSLDQRLKPGFMLH 500
           + R  ++    L PG  + 
Sbjct: 568 KRRLSRTFGIDLLPGHTIG 586


>gi|224283491|ref|ZP_03646813.1| methionyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 616

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 142/542 (26%), Positives = 233/542 (42%), Gaps = 53/542 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 2   VNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 61

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T +   ++ +R        L +SYD F RTT   H    + L+K+    G IYKG     
Sbjct: 62  TAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQKVA 121

Query: 128 YSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFRLS 170
            S          Y   +     ADG   +               NPV  +  E   F  +
Sbjct: 122 ISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRFEET 181

Query: 171 AYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP----- 221
            +    L    E++  ++   +     +     GL      R   +  DWGI +P     
Sbjct: 182 EHFFLDLPALAEANLAWLKTRKGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVAGWI 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+  
Sbjct: 242 DNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQI 301

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++   
Sbjct: 302 WPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARY 361

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-T 379
            VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  +    
Sbjct: 362 PVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGEIPALD 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             + T  D ++L   S    EI   ++      AL   + +V ++++Y  A++PW++ K 
Sbjct: 422 EDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYISAEEPWKI-KD 480

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPG 496
           +  R  TVL+V  + +     LL  F+P  + K+++ L  +        L++     KPG
Sbjct: 481 DEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEALGGSGVFSPLPRLEEVEDLDKPG 540

Query: 497 FM 498
           F 
Sbjct: 541 FT 542


>gi|260803681|ref|XP_002596718.1| hypothetical protein BRAFLDRAFT_78382 [Branchiostoma floridae]
 gi|229281977|gb|EEN52730.1| hypothetical protein BRAFLDRAFT_78382 [Branchiostoma floridae]
          Length = 579

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 119/545 (21%), Positives = 225/545 (41%), Gaps = 54/545 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ ADV +R+ RL G + L+  GTDE+G      A 
Sbjct: 32  KNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYCRLRGWNALYICGTDEYGTATETRAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+      D+    +I +D F RTT  +  +  + ++ ++  +  +    
Sbjct: 92  EEGLTPQQICDKYHALHADIYRWFNIDFDFFGRTTTPQQTEIAQDIFWRLHQRDHLLTDT 151

Query: 124 YSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFF-------- 167
                  + + +  D           Y+ A G   +     +   E +            
Sbjct: 152 VDQLLCEKCDRFLADRFVEGTCPLCNYEDARGDQCDKCGKLIVATELKKPRCKVCSASPV 211

Query: 168 -RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWG 217
            + S +    L   E      L     ++  S         +++ GLK   ++R    WG
Sbjct: 212 VKTSTHLFLNLPQIEPKLSGWLEEILPSDSWSSNARVITRTWLRDGLKPRCITRD-LQWG 270

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
             +P     + + YVW DA   YL+ T    +      K  P ++   + + KD + FH+
Sbjct: 271 TPVPLKGFTEKVFYVWFDAPIGYLSITANYTDQWEKWWKN-PDEVTLYNFMAKDNVPFHS 329

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFL 329
           + +P  LL A  N  L   + +  F+ ++  K SKS G  +   +  +  +  D  R++L
Sbjct: 330 VVFPCSLLGAEDNYTLVNHLQATEFLNYEDGKFSKSRGIGVFGDDAKDTSIPADIWRFYL 389

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  +  + L  + N++L N +GN +  ++  +               ESD  
Sbjct: 390 LYVRPENQDTTFSWEDLMVKHNSELLNNLGNFIYSTIPTM------------DLDESDTE 437

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNPDRAST 446
           +L+  +R LQ    NM+   +   L  ++++    ++Y  A KPW L K       RA T
Sbjct: 438 MLAQVNRELQMYNFNMERVRLREGLTTILNISRLGNQYIQASKPWVLLKGTEQERARAGT 497

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDP 505
           V+ +   +   L++LL  ++P ++ +I   L    D N     L   L PG  + +   P
Sbjct: 498 VVGLCANIACVLSVLLHPYMPDISTQIQAQLAAPVDVNVVGDRLVCHLAPGHKIGQP-KP 556

Query: 506 IFPRF 510
           +F + 
Sbjct: 557 LFEKL 561


>gi|158320039|ref|YP_001512546.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|187645698|sp|A8MG12|SYM1_ALKOO RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|158140238|gb|ABW18550.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 540

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 131/536 (24%), Positives = 239/536 (44%), Gaps = 42/536 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+GH   ++  DV+AR+ R  G +VL+ +G+D HG  I+  A+N 
Sbjct: 2   NIFIGGAWPYANGSLHLGHVAALLPGDVMARYFRAKGENVLYVSGSDCHGTPISIRAKNE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            V+ +   +Q  + F+   + L  SYD + RT +  H +  + + K + +   IY+    
Sbjct: 62  NVSPQEIAEQYHKEFKYCFEELGFSYDYYSRTDDAYHKEEVQRIIKLLYENEFIYEKEVE 121

Query: 126 GWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG----------- 164
             Y      +  D  V           +G      +   +P+     +            
Sbjct: 122 QLYCADCNQFLPDRFVEGICPVCKNIARGDQCDVCSTILDPLDLHHRKCKICGSEPEIKN 181

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
               FF+LS +Q+ L ++ E   +    +   N    ++K GL+D ++SR   +WG  I 
Sbjct: 182 GNQLFFKLSKFQEMLQNHLEDSKKKWR-VNALNNTERYLKEGLQDRAISRD-LNWGIEIP 239

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA----DLHVIGKDILRFHAIYW 275
           I    +  +YVWIDA+  Y T +           + + +       + GKD + FH++ +
Sbjct: 240 IKGYEEKRVYVWIDAVLGYYTVSKKWGIERNRDWETFWSKEAIHYFIHGKDNIPFHSLIF 299

Query: 276 PAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA L       +P ++ S  +I  +G+KIS S    +   ++IE   VD++RYFL+    
Sbjct: 300 PALLNGIGYKKMPDRIISSEYITLEGKKISTSNNWAVWVPDMIERYNVDSIRYFLLANGP 359

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N +L    GNLV+R+   + K ++  IP      + +E I    
Sbjct: 360 EKRDADFSWREFINSNNGELLGAYGNLVNRTFVFVKKYFNNTIP----VGKLEEEIERAT 415

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++  E+ +++++  +  AL Q+   +  +++YFD + PW    TN D  S  +Y  +  
Sbjct: 416 EKLYDEVGKSIESGNLRLALEQIFQFIRSINKYFDEETPWTTVNTNIDDCSNTIYNCLFS 475

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I  +A LL  F+P  + KI + +   + +    SL   ++ G      F+ +F R 
Sbjct: 476 IINIANLLNPFLPSSSAKIKEWMGCKEASWNKLSLSSGIQLG-----DFNILFERL 526


>gi|170577156|ref|XP_001893903.1| methionyl-tRNA synthetase [Brugia malayi]
 gi|158599817|gb|EDP37273.1| methionyl-tRNA synthetase, putative [Brugia malayi]
          Length = 940

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 117/563 (20%), Positives = 227/563 (40%), Gaps = 63/563 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+    ++ ADV +R+  L G   LF  GTDE+G      A 
Sbjct: 29  KNILITSALPYVNNVPHLGNIVGCVLSADVFSRYCYLKGWRRLFICGTDEYGTATETKAI 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+       +    +I +D F RTT +   +  + ++ K+   G      
Sbjct: 89  QEGLTPRQICDKYHAIHAKIYKWFNIDFDHFGRTTTQHQTELTQEIFLKLHKNGFTSTDT 148

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               +      +  D  V            +G          N V+ +    +  + +  
Sbjct: 149 VDQLHCDSCSRFLADRFVCGECPHCHFDDARGDQCDACGKLINAVELINPRCHLCKATPI 208

Query: 173 -QDKLLSYYESHPEFILPIERRNEVIS----------------FVKSGLKDLSLSRKTFD 215
            +     +           +  NE ++                ++K GL+   ++R    
Sbjct: 209 VKPSNHIFLHLDKLADKVEKHLNEQLNLGKNQWSPNAISIAKSWLKGGLEKRCITRD-LK 267

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--ADLH-VIGK----- 265
           WG+ +P +     + YVW DA   YL+ T      D S+    P   DL+  +GK     
Sbjct: 268 WGVSVPLESFSNKVFYVWFDAPIGYLSITKEYLGEDWSQWWKNPSIVDLYNFVGKVAYFF 327

Query: 266 ----DILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISK-----------SLG 308
               D + FHA+ +PA  +    N  +  ++ +  ++ ++  K SK           S G
Sbjct: 328 VPFHDNVAFHAVMFPATQIGTGDNYTVVNRLCATEYLNYESMKFSKHGFAFLFDIFQSRG 387

Query: 309 NVIDPI-EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             +         +  D  R++L+      +D  +  D    +VN +L N +GN V+R++ 
Sbjct: 388 TGVFGDMAAETGIDADIWRFYLLYIRPETQDTSFSWDDFSLKVNTELLNNLGNFVNRALI 447

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            + K +DG++P      E D+++L+  S  L +    + +  +   + +V+S+    + Y
Sbjct: 448 FLSKYFDGVVPDMH-LQEQDKALLAQVSSDLSDFDLCLSSVKLRDGIVKVLSISRHGNLY 506

Query: 428 FDAQKPWELKK---TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
             + +PW L K    +  RA TV+ +   +   +A++L  ++P ++ KI +         
Sbjct: 507 IQSTQPWVLIKGSENDRKRAGTVIGIVANLAYLIAVMLYPYMPSISAKIREHCGHLALAS 566

Query: 485 CFQSLDQRLKPGFMLHKTFDPIF 507
              +    LKPG  + +   P+F
Sbjct: 567 LPSTPIAFLKPGHKIGEP-KPLF 588


>gi|23464786|ref|NP_695389.1| methionyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|25009342|sp|P59076|SYM_BIFLO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23325363|gb|AAN24025.1| methionyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 621

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 231/544 (42%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQ 123

Query: 126 G-----------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFR 168
                          +  E      E  +G        +       NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L       +  L   +     +     GL      R   +  DWGI +P   
Sbjct: 184 QTEHYFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPACPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPP 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  A K+++ L           L +     K
Sbjct: 483 KDDQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|310288247|ref|YP_003939506.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309252184|gb|ADO53932.1| Methionyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 620

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 142/544 (26%), Positives = 234/544 (43%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + L+K+    G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y   +     ADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L    E++  ++   +     +     GL      R   +  DWGI +P   
Sbjct: 184 ETEHFFLDLPALAEANLAWLKTRKGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVPVAG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  +  
Sbjct: 364 RYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGEIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D ++L   S    EI   ++      AL   + +V ++++Y  A++PW++ 
Sbjct: 424 LDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVATMRVVGDINKYISAEEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  + K+++ L  +        L++     K
Sbjct: 483 KDDEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEALGGSGVFSPLPRLEEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|190346778|gb|EDK38945.2| hypothetical protein PGUG_03043 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 751

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 113/550 (20%), Positives = 221/550 (40%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ A++ +    + LF  GTDE+G     
Sbjct: 188 KNERNILITSALPYVNNVPHLGNIVGSVLSADIYAKYVQNRNYNSLFICGTDEYGTATET 247

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+  +  +D+ D  DI++D F RTT  +  +  + ++ K+ + G + 
Sbjct: 248 KALEEKVTPQELCDKYHKVHKDVYDWFDINFDHFGRTTTPQQTEIAQDIFLKLYNNGYLE 307

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      Y    +++  D  V        Y+ A G   +   N +   E      +L   
Sbjct: 308 EKTTEQLYCEEHKSFLADRFVEGTCPKCGYEDARGDQCDKCGNLLDPFELINPRCKLDNA 367

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKTF 214
           +    +    + +         E                     ++  GL+   ++R  F
Sbjct: 368 KPIPRNSTHIYLKLGDLQGELKEWFEKASTDGKWSKNAVQITSSWINRGLESRCITRDLF 427

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD------LHVIGK 265
            WG  + + +    ++YVW DA   Y++ T  Y  + +      W  +         +GK
Sbjct: 428 -WGTPVPLKNYHDKVLYVWFDATIGYVSITANYFKDKNTEDWLKWWKNPEHVDLYQFMGK 486

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +P+  +       K   + +  ++ ++G K SKS G  +      E  +  
Sbjct: 487 DNVPFHTVVFPSSQIGTRDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAKETGITP 546

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L        D  +       R N++L   +GN V+R V   +  Y+G+IP    
Sbjct: 547 SVWRYYLASIRPETSDAQFSWGEFVTRNNSELLANLGNFVNRLVKFTIAKYNGVIPDYKV 606

Query: 383 FTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D ++     + +L    ENM+   I + L   +++ S  + +    K    L    
Sbjct: 607 SEIPDYAVFEKDVNELLSSYIENMEAVNIRKGLELAMAISSRGNLFLQDNKLDNTLYTKY 666

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P ++  V+ V + +I  ++ L+  F+P    ++ +IL V   +   +  +  L+ G  + 
Sbjct: 667 PAKSDAVVGVGMNLIYLVSSLIYPFMPSTTAQMNEILNVPPLSITNK-FELVLEAGHCIG 725

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 726 KA-QYLFQRI 734


>gi|237798783|ref|ZP_04587244.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021636|gb|EGI01693.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 495

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 119/499 (23%), Positives = 209/499 (41%), Gaps = 36/499 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E  K+ +++A+ Y N   H+GH  E I  D+  RF +  G   ++    D HG  I  
Sbjct: 1   MSEPRKILVTSALPYANGPVHLGHMLEYIQTDMWVRFQKHRGNQCIYVCADDAHGSAIML 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +  +D          D   + +D+F  T    + +   +++K++ D G I 
Sbjct: 61  RAEKEGITPEQLIDNVKAEHSADFDDFLVDFDNFHSTHSDENRELSSMIYKRLRDAGHIA 120

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG----- 164
               + ++      +  D            E   G + +   A + P      +      
Sbjct: 121 TRSVTQYFDPEKNMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTDLKNPKSAISGA 180

Query: 165 -YFFRLSAYQDKLLSYYE-----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  ++           L     N++  ++ SGL+   +SR    +G 
Sbjct: 181 TPVLKDSKHFFFDLPAFDTLLKSWTRSGTLQDAVANKIAEWLDSGLQQWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFH 271
           +IPD+P    YVW+DA   Y+ +   L           +W  D      H IGKDI+ FH
Sbjct: 241 EIPDEPGKYFYVWLDAPIGYMASFKNLCARRPDLDFDAYWGKDATTELYHFIGKDIVNFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           A++WPA L  ANL  P  +  HG++   G+K+SKS G  I     ++ +  + LRY+   
Sbjct: 301 ALFWPAMLEGANLRKPTAINVHGYLTVNGQKMSKSRGTFIKARTYLDHLSPEYLRYYYAS 360

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           ++     D   + +   ++VN+DL   + N+ SR    I K   G++    A  E  ++ 
Sbjct: 361 KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGVMVQANAAPELTDAF 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVL 448
           L+        I +  + +   RA+ + ++L    + Y   + PW L K     D    V 
Sbjct: 421 LA----AAPGIADAYEARDFARAMRETMALADRANAYIAEKAPWALAKQEGKQDEVQAVC 476

Query: 449 YVTVEVIRQLAILLQAFVP 467
            + + + RQL I L+  +P
Sbjct: 477 ALGINLFRQLVIFLKPVLP 495


>gi|255711786|ref|XP_002552176.1| KLTH0B08976p [Lachancea thermotolerans]
 gi|238933554|emb|CAR21738.1| KLTH0B08976p [Lachancea thermotolerans]
          Length = 751

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 109/547 (19%), Positives = 214/547 (39%), Gaps = 41/547 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G    
Sbjct: 192 IEGERNILITSALPYVNNVPHLGNIVGSVLSADIYARYCKARNYNTLFVCGTDEYGTATE 251

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G T +   D+  +   D+     I +D F RTT ++  +  + ++ K+++ G +
Sbjct: 252 TKAIEEGCTPRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEKQTEIAQDIFNKLNNNGYL 311

Query: 120 YKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +      Y    +AY  D           Y+ A G   +     +   E      +L  
Sbjct: 312 EEHSMKQLYCEEHKAYLADRYVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDN 371

Query: 172 YQDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKT 213
            +    +             R  E +                   ++K GL+   ++R  
Sbjct: 372 SKPIPRNSDHIFISLDKLEPRIKEWVEKSSREGGWSKNSRTITQSWLKEGLQPRCITRD- 430

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +      ++YVW DA   Y++ T    +      K  P ++     +GKD +
Sbjct: 431 LVWGTPVPLEKYKDKVLYVWFDATIGYVSITANYTDGWKKWWKD-PENVQLYQFMGKDNV 489

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   L  N        + +  ++ ++G K SKS G  +      +  V     
Sbjct: 490 PFHSVIFPGSQLGTNENWTMLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAKDTGVSPSVW 549

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L        D  +       R N++L   +GN V+R V  +   Y+G++P       
Sbjct: 550 RYYLASVRPESSDSHFSWSDFVARNNSELLANLGNFVNRLVKFVNAKYNGVVPEYDQKQL 609

Query: 386 SDE-SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           +D   +    + +L      M+     R L   +SL +  + +    K    L    P +
Sbjct: 610 ADFVKLEKDINSILSSYVSEMEQSHERRGLEIAMSLSARGNLFLQENKLDNSLFSEFPAK 669

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           +  V+ V + ++  +A ++  F+P+ A  I+ +L    +          ++ G  ++K  
Sbjct: 670 SDAVVGVGLNIVYSVASVIYPFMPEAAETIYKMLNAPAKKID-DKFYLCIEGGHNINKA- 727

Query: 504 DPIFPRF 510
           + +F R 
Sbjct: 728 EYLFKRI 734


>gi|227548250|ref|ZP_03978299.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079673|gb|EEI17636.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 611

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 150/542 (27%), Positives = 230/542 (42%), Gaps = 53/542 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M   + + +  A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  + 
Sbjct: 1   MTSHDNVLVCVAWPYANGPRHIGHVAGFGVPSDVFARYLRMTGHNVLMVSGTDEHGTPLL 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT K   D+ +    +    L +SYD F RTT + H+   + L+K +   G +
Sbjct: 61  VQADKEGVTVKELADRYNAQIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYANGYM 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEE 162
            K    G  S        D  +             G   +            NPV  +  
Sbjct: 121 VKETTRGAISPSTGRTLPDRYIEGTCPICGATDARGDQCDTCGNQLDPADLINPVSKING 180

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWG 217
           E   F  + +    L       +  L   R +   + +K  L  L   R        DWG
Sbjct: 181 ETPEFVDTEHFMLDLPALHDALKDWL-ETREDWRPNVLKFSLNLLEDMRPRAMTRDIDWG 239

Query: 218 IKI-----PDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPAD-----LHVIGK 265
           I I      D+P   +YVW DA+  YL+ +      + +    K +  D      + +GK
Sbjct: 240 IPIPVEGWQDNPSKKLYVWFDAVVGYLSASIEWAARSGEPDAWKAFWQDPATEGFYFMGK 299

Query: 266 DILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D + FH+  WPA LL                 L LP +V S  F+   G K S S G VI
Sbjct: 300 DNITFHSQIWPAELLGYAGKGAAGGEPGELGELNLPTEVVSSEFLTMSGSKFSSSKGVVI 359

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K
Sbjct: 360 YVKDFLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHK 419

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           ++   +P PG   +SD+ IL +  R   E   ++       A+ +V+ +V E + Y    
Sbjct: 420 NFG-EVPAPGVLEDSDQRILELAERTFVEAGADLGEAKFKNAITKVMHVVGEANAYIAEN 478

Query: 432 KPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +PW+L K     DR +TVL+  ++V+     +L  F+P  A ++ + L    +      +
Sbjct: 479 EPWKLAKDPAQRDRLATVLWTALQVVSDCNAMLTPFIPHTAQRVHETLGRDGQWAANPRI 538

Query: 490 DQ 491
           ++
Sbjct: 539 EE 540


>gi|328849345|gb|EGF98527.1| hypothetical protein MELLADRAFT_50986 [Melampsora larici-populina
           98AG31]
          Length = 675

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 119/550 (21%), Positives = 231/550 (42%), Gaps = 51/550 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGL--DVLFTTGTDEHGQK 57
           + +R  + I++A+ Y N  PH+G+     + ADV AR+ R   +   VL+  GTDE+G  
Sbjct: 16  LSDRPNILITSALPYVNNAPHLGNIIGSTLSADVYARYRRTGPIPSQVLYICGTDEYGTT 75

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
               A   G++     D+  +  +D  +  DIS+D F RTT  +  + C+ ++  + +  
Sbjct: 76  TETKALEEGLSPGALCDKYHQVHKDSYEWFDISFDHFGRTTTPKQTEICQEIFTALYNND 135

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGA--------------------------DGQYYN 151
            + +      Y   D+ +  D  V                              D +   
Sbjct: 136 HLVEHTVEQVYCNNDQRFLADRFVEGTCPKCGASGARGDQCDTCCQTLDAIDLIDKKCKI 195

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE-FILPIERRNEVISFVKSGLKDLSLS 210
             H+PV   + +  +  L   Q  + S+Y S  E        +    ++++ GL++  L+
Sbjct: 196 CSHSPVT-RKSKHLYLNLPKLQKTIESWYSSAKEGKHWSANGKAFTEAWLRDGLRERCLT 254

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGK 265
           R    WG+ +P D     +MYVW DA   Y + T    +      K  P ++     +GK
Sbjct: 255 RD-LKWGVPVPLDGWKDKVMYVWFDAPIGYPSITANYTDDWKKWWKN-PEEVTLYQFMGK 312

Query: 266 DILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH I +PA+L+           + +  ++ ++  K SKS    +      E  V  
Sbjct: 313 DNVPFHTILFPAYLMGTGEKWTMLNHISTTEYLQYENAKFSKSNNIGVFGQNARETGVPS 372

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-- 380
           +  RY+L+       D  +       + N++L N +GN V+R +      ++ ++P P  
Sbjct: 373 EVWRYYLISTRPETNDSQFTWTDFIAKANSELLNNLGNFVNRIIKFCNARFNSIVPDPLS 432

Query: 381 ------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-P 433
                   F + D+  +     +L +  E+ ++  +  ALA V+ + +  ++Y    K  
Sbjct: 433 WPIPGRDEFDQLDQEFVRDIDNLLNQYIESAESLKLRNALAIVMLISARGNQYLQDNKID 492

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           + L  T+P R + ++ V++ ++  L++L+  F+P  ++ I   L     +    +    L
Sbjct: 493 YNLLLTSPRRCAQIVLVSMNLVYLLSVLVHPFMPTTSDLILKQLNAPQRSLPL-TFGIDL 551

Query: 494 KPGFMLHKTF 503
            PG M+ +  
Sbjct: 552 LPGHMIGEAV 561


>gi|302876074|ref|YP_003844707.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307686795|ref|ZP_07629241.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578931|gb|ADL52943.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 538

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 130/535 (24%), Positives = 227/535 (42%), Gaps = 40/535 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + I  A  Y N   HIGH   ++  DVLAR++R  G +VL+ +G+D HG  I+  A+  
Sbjct: 2   NILIGGAWPYANGSLHIGHIAALLPGDVLARYYRGKGDNVLYVSGSDCHGTPISIRAKKE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ K   D+    F+   + L+ SYD + RT ++ H    +     + +KG IY+    
Sbjct: 62  GVSPKDIADKYHGEFKKCFEKLNFSYDYYGRTDDEFHKKEVQEAILLLYNKGLIYEKEVE 121

Query: 126 GWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG----------- 164
             Y      +  D  V           +G       +   P++  E +            
Sbjct: 122 QIYCEHCNQFLPDRYVEGVCPKCHSIARGDQCDNCGSLLEPLELSERKCKLCNSEPIVKN 181

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGIKI 220
               +F LS +Q+ +        +    I   N    ++K GL D ++SR  +    I I
Sbjct: 182 AKQLYFSLSKFQNTIKENL-DKTQGNWRINAVNNTERYLKEGLCDRAISRDLSLGIDIPI 240

Query: 221 PDDPQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPA---DLHVIGKDILRFHAIYWP 276
                  +YVWIDA+  Y   +  +      S  +FW       +V GKD + FH+I  P
Sbjct: 241 QGFNDKKVYVWIDAVLGYLTMSKKWALENKKSYEEFWDESAISYYVHGKDNIPFHSIILP 300

Query: 277 AFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A +       LP+++ S   +  +G+KIS S    +   ++IE    DALRYF +     
Sbjct: 301 ALIKGIGYNKLPERIISSEHLTLEGKKISTSNNWAVWVPDIIEAYNSDALRYFFLINSPE 360

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         N +L    GNLV+R++    K ++  IP        D +I     
Sbjct: 361 KRDTDFSFREFVNSNNGELLGAYGNLVNRTLVFAKKYFNNKIPNGR----VDSNIKKEIE 416

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +   I + ++   +  AL ++   +  +++YFD + PW   K + +     +Y  +  I
Sbjct: 417 SLYDLIGKFIEQGNLKVALEKIFEFIRSINKYFDEKTPWITVKDDLEVCGNTIYNCIYSI 476

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             LA LL  F+P+ + KI   L + ++   +++++     G  + +    +F R 
Sbjct: 477 ANLANLLSPFLPESSAKIKAWLAINEDK--WEAINPNC--GVSIEE-VTILFERL 526


>gi|13940612|gb|AAK50414.1|AC021891_15 Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 596

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 115/563 (20%), Positives = 222/563 (39%), Gaps = 70/563 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ R  + +++A+ Y N  PH+G+    ++ AD  AR+ RL G +VL+  GTDE+G    
Sbjct: 11  VEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G + +   D+     +++ +  DIS+D F RT+  +  + C+ ++ K+ D   +
Sbjct: 71  TKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWL 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      Y    + +  D  V      +  N         E+ G     +   +     
Sbjct: 131 SENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKA 190

Query: 180 YE-----------SHPEFILPIERRN--------------------EVISFVKSGLKDLS 208
                         H    LP+ R                         +++K GLK   
Sbjct: 191 CHVCGSTPCVRDTDHLFLELPLLREKLEKYIDETSLTGSWSQNAIHATNAWLKEGLKPRC 250

Query: 209 LSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVI 263
           ++R    WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +
Sbjct: 251 ITRD-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITA-CYTPEWEKWWKNPENVELYQFM 308

Query: 264 GKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           GKD + FH + +P+ LL         K +    ++ ++  K SK+ G  +   +      
Sbjct: 309 GKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNI 368

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMI 377
                           D  +    L+ + N +L N +GN ++R +S I K     Y  ++
Sbjct: 369 PPEA-----------SDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVV 417

Query: 378 PTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           P           +S+     +++ +  + M    I + L   +++ SE + Y    + W+
Sbjct: 418 PDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWK 477

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF-------- 486
           L K +P   +TV+  +V ++  LA LL+ F+P  +  +   L +  +E+  F        
Sbjct: 478 LYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCDEKGEVE 537

Query: 487 --QSLDQRLKPGFMLHKTFDPIF 507
             +     +  G  + K   P+F
Sbjct: 538 KAKRPWDLIPSGHRIGKPA-PLF 559


>gi|146418697|ref|XP_001485314.1| hypothetical protein PGUG_03043 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 751

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 113/550 (20%), Positives = 221/550 (40%), Gaps = 44/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+ A++ +    + LF  GTDE+G     
Sbjct: 188 KNERNILITSALPYVNNVPHLGNIVGSVLSADIYAKYVQNRNYNSLFICGTDEYGTATET 247

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +   D+  +  +D+ D  DI++D F RTT  +  +  + ++ K+ + G + 
Sbjct: 248 KALEEKVTPQELCDKYHKVHKDVYDWFDINFDHFGRTTTPQQTEIAQDIFLKLYNNGYLE 307

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      Y    +++  D  V        Y+ A G   +   N +   E      +L   
Sbjct: 308 EKTTEQLYCEEHKSFLADRFVEGTCPKCGYEDARGDQCDKCGNLLDPFELINPRCKLDNA 367

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKTF 214
           +    +    + +         E                     ++  GL+   ++R  F
Sbjct: 368 KPIPRNSTHIYLKLGDLQGELKEWFEKASTDGKWSKNAVQITSSWINRGLESRCITRDLF 427

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPAD------LHVIGK 265
            WG  + + +    ++YVW DA   Y++ T  Y  + +      W  +         +GK
Sbjct: 428 -WGTPVPLKNYHDKVLYVWFDATIGYVSITANYFKDKNTEDWLKWWKNPEHVDLYQFMGK 486

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH + +P+  +       K   + +  ++ ++G K SKS G  +      E  +  
Sbjct: 487 DNVPFHTVVFPSSQIGTRDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAKETGITP 546

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              RY+L        D  +       R N++L   +GN V+R V   +  Y+G+IP    
Sbjct: 547 SVWRYYLASIRPETSDAQFSWGEFVTRNNSELLANLGNFVNRLVKFTIAKYNGVIPDYKV 606

Query: 383 FTESDESILSV-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
               D ++     + +L    ENM+   I + L   +++ S  + +    K    L    
Sbjct: 607 SEIPDYAVFEKDVNELLSSYIENMEAVNIRKGLELAMAISSRGNLFLQDNKLDNTLYTKY 666

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P ++  V+ V + +I  ++ L+  F+P    ++ +IL V   +   +  +  L+ G  + 
Sbjct: 667 PAKSDAVVGVGMNLIYLVSSLIYPFMPSTTAQMNEILNVPPLSITNK-FELVLEAGHCIG 725

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 726 KA-QYLFQRI 734


>gi|227546913|ref|ZP_03976962.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227212593|gb|EEI80481.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 621

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 231/544 (42%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQ 123

Query: 126 G-----------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFR 168
                          +  E      E  +G        +       NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L       +  L   +     +     GL      R   +  DWGI +P   
Sbjct: 184 QTEHYFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKD 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPP 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  A K+++ L           L +     K
Sbjct: 483 KDDQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|294790187|ref|ZP_06755345.1| methionine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458084|gb|EFG26437.1| methionine--tRNA ligase [Scardovia inopinata F0304]
          Length = 632

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 141/583 (24%), Positives = 232/583 (39%), Gaps = 81/583 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVQADAE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R        L +SYD F RTT K H    + ++K+    G IY+G   
Sbjct: 64  GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHEKVVQDMFKQCLKNGYIYQGTQM 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S  +       Y        G DG   +               NP   +  E   F 
Sbjct: 124 VAISPSNGRTLPDRYIEGTCPLCGYDGARGDQCDNCGNELDSIDLINPRSKINGEIPRFE 183

Query: 169 LSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD- 223
            + +    L    E++  ++   +     +     GL D    R   +  +WGI IP D 
Sbjct: 184 ETDHYFLDLPALAEANLAWLKTRKNWRTNVINFSLGLFDEVKPRAITRDINWGIPIPVDG 243

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
               P   +YVW DA+  YL+ +             + W  D      + +GKD + FH+
Sbjct: 244 WVDNPDKKLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPESPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+                L LP +V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEILAYNGEGSKGGEPGGLGRLNLPTEVVASEFLSMEGKKFSSSRGIVIYVKDILS 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +L +  GNLV+R   ++ K++  +  
Sbjct: 364 RYQVDAVRYYISIAGPETSDSDFTWSEFVRHNNEELVSSWGNLVNRVAVLLYKNFGQIPQ 423

Query: 379 TP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               A  + D  +L         +   +++     AL + + +V E++RY  A +PW+L 
Sbjct: 424 IELTALEDMDRDLLKTTEEGFHTVGSLIESHRQKAALTEAMHIVQEINRYVSATEPWKL- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD------- 490
           K NP+R + VL+   + +     LL  F+P  A K+++ L           L+       
Sbjct: 483 KDNPERLAAVLHTAAQAVMDANTLLAPFLPHSAQKVYETLGGKGTFSPLPHLEDVQDLDN 542

Query: 491 -----------------------QRLKPGFMLHKTFDPIFPRF 510
                                  Q +  G ++ K   PIF + 
Sbjct: 543 PDFTYPIITGTYKLGENVRPWKRQEITAGTIIAKP-SPIFQKI 584


>gi|291303161|ref|YP_003514439.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572381|gb|ADD45346.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 597

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 132/578 (22%), Positives = 225/578 (38%), Gaps = 82/578 (14%)

Query: 12  AIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           A  Y N   HIGH     + AD+ AR+ R+ G DVL  +GTDEHG  I   A   G    
Sbjct: 9   AWPYANGPRHIGHVAGFGVPADIFARYMRMAGHDVLMVSGTDEHGTPILVQADQEGAKPA 68

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
              ++ +R   +  + L +SYD F RTT   H+   + +++ +   G I +    G  S 
Sbjct: 69  ELANRYNRVIVEDLNALGMSYDLFTRTTTANHYQVVQEMFRTVHANGYIVEKTTKGAISP 128

Query: 131 RDE-----AYYNDDEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                    Y        G D   G   +   N +  ++      R++    K +     
Sbjct: 129 STGRTLPDRYIEGTCPICGYDNARGDQCDNCGNQLDPIDLINPKSRINGEVPKFIETQHF 188

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKT-------------FDWGIKI-----PDDP 224
             +     +   E +        ++                    DWG+ +      D+P
Sbjct: 189 FLDLPALADALGEWLKTRSDWRPNVLKFAMNLVDDMRPRAITRDLDWGVPVPLEGWQDNP 248

Query: 225 QYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYWPA 277
              +YVW DA+  Y + +        D    + W  D      + +GKD + FHA  WPA
Sbjct: 249 TKRLYVWFDAVIGYFSASVEWARRSGDPEAWRKWWNDPEALSYYFMGKDNITFHAQIWPA 308

Query: 278 FLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
            LL                 L LP +V S  ++  +G+K S S   VI   + +E  G D
Sbjct: 309 ELLAHNGKGSKGGEPGVYGELNLPTEVVSSEYLTMEGKKFSSSRKVVIYVRDFLERYGPD 368

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALRYF+        D  +      +R N +L  G GNLV+RS++M  K++  + P  G  
Sbjct: 369 ALRYFIAAAGPENNDTDFTWAEFVRRNNDELVAGWGNLVNRSIAMAAKNFGQI-PEAGEL 427

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            + D  +L+  +     +  ++ +  +   + + +  V+ V++Y     PW+L K +  R
Sbjct: 428 EDIDRELLATVTAAFDTVGGHLASNKVKAGIGEAMRTVAAVNKYLADTAPWKL-KEDKPR 486

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ------------ 491
            +TVL+V ++ +     LL  F+P  + K+ ++L   ++      +++            
Sbjct: 487 MATVLHVALQAVNDCKTLLAPFLPFSSQKVNELLGGKEDFAPMPRIEEVEDLDGDAAFGT 546

Query: 492 -------------------RLKPGFMLHKTFDPIFPRF 510
                               ++ G  L K   PIF + 
Sbjct: 547 GTYPILTGDYTGTPSWQSHPIQAGHPLDKP-TPIFTKL 583


>gi|213693272|ref|YP_002323858.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254782853|sp|B7GP85|SYM_BIFLI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|213524733|gb|ACJ53480.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 621

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 139/544 (25%), Positives = 231/544 (42%), Gaps = 53/544 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   VLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG   
Sbjct: 64  GLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGSQQ 123

Query: 126 G-----------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFR 168
                          +  E      E  +G        +       NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L       +  L   +     +     GL      R   +  DWGI +P   
Sbjct: 184 QTEHYFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P
Sbjct: 364 RYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPP 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ 
Sbjct: 424 LDEDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLK 494
           K +  R  TVL+V  + +     LL  F+P  A K+++ L           L +     K
Sbjct: 483 KDDQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDK 542

Query: 495 PGFM 498
           PGF 
Sbjct: 543 PGFT 546


>gi|256374791|ref|YP_003098451.1| methionyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919094|gb|ACU34605.1| methionyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 596

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 140/519 (26%), Positives = 229/519 (44%), Gaps = 57/519 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I+  A+  G++ 
Sbjct: 9   VAWPYANGPRHIGHVSGFGVPSDVFSRYMRMSGHRVLMVSGTDEHGTPISVQAEKEGLSV 68

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   D+ +R   +    L +SYD F RTT   H++  + L+  +   G +      G   
Sbjct: 69  RALADKYNRVIAEDLQGLGLSYDLFTRTTTGNHYNVTQELFLAMWRNGYVVAKTGKGAIS 128

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEG 164
                      +         +  +G        Q +PV               ++E E 
Sbjct: 129 PSTGRTLPDRYIEGTCPICGYDGARGDQCDSCGNQLDPVDLKNPKSRINGETPKFVETEH 188

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            +  L  + D L ++ ++  E+   + + ++ +      L+  +++R   DWGI IP D 
Sbjct: 189 LYLDLPQFIDSLGTWLQTRSEWRPNVLKFSQNLI---GDLRPRAITRD-LDWGIPIPLDG 244

Query: 225 Q-----YIMYVWIDALTNYL---TTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAI 273
                    YVW DA+  Y               +  +FW  D    + +GKD + FH++
Sbjct: 245 WRDQSMKRFYVWFDAVIGYFSASVEWARRSGNPDAWREFWTGDAQAYYFMGKDNIVFHSL 304

Query: 274 YWPA--------------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            WP+                    L LP +V S  F+   G K S S GNVI   + + +
Sbjct: 305 IWPSLLLGNNGEGAGGGEPGGFGKLNLPTEVVSSEFLTMSGSKFSTSRGNVIYVTDFLRD 364

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALRYF+       +D  +  +   +R N +LAN  GNLV+RS+SM  K+    +PT
Sbjct: 365 FGPDALRYFIAAAGPENQDTDFTWEEFVRRTNFELANEWGNLVNRSISMAHKNVG-AVPT 423

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P A T +D  +L    R    + EN++      A ++ + +V   +RY   Q+PW+L K 
Sbjct: 424 PTAPTAADHELLETSRRAFGVVGENLRRSRFKAASSEAMRVVGAANRYLSDQEPWKL-KD 482

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +P R  TVL+  ++V++    LL  F+P  A K+ ++L 
Sbjct: 483 DPARRDTVLHTALQVVQDANTLLTPFLPHSAQKVHELLG 521


>gi|149238245|ref|XP_001524999.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451596|gb|EDK45852.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 755

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 111/552 (20%), Positives = 215/552 (38%), Gaps = 47/552 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + +F  GTDE+G      
Sbjct: 189 DERNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNAIFICGTDEYGTATETK 248

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT +   D+  +  + + D  DI +D F RTT     +  + ++KK+     + +
Sbjct: 249 ALEDGVTPQQLCDKYHKIHKQVYDWFDIGFDYFGRTTTPLQTEIAQDIFKKLDKGEYLEE 308

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                 Y     ++  D  V            +G          +P++ +E         
Sbjct: 309 KTTEQLYCEHHHSFLADRFVEGICPKCGYEDARGDQCDKCGQLLDPLELIEPRCKVDGTK 368

Query: 171 AYQDKLLSYYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRKTFD 215
                    Y    E   P++                     S++K GL+   ++R    
Sbjct: 369 PIVKPSTHIYLKLNELETPLKEWVDISSEKGAWSKNSKTITNSWIKQGLEPRCITRD-LK 427

Query: 216 WGIKIPD--DPQYIMYVWIDALT-------NYLTTTGYLDNPDGSKAKFWPADL---HVI 263
           WG  +P       ++YVW DA         NY  +       +  K    P ++     +
Sbjct: 428 WGTPVPRPGYEDKVLYVWFDATIGYVSITANYFKSIDESSVDNWQKWWKNPENVDLYQFM 487

Query: 264 GKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-V 320
           GKD + FH + +PA  +       K   + +  ++ ++G K SKS G  +      E  V
Sbjct: 488 GKDNVPFHTVVFPASQIGTGDNWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAEETGV 547

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
                RY+L        D  +  D    + N++L   +GN V+R V   +  Y+G++P  
Sbjct: 548 PASVWRYYLASSRPETSDAHFSWDDFVTKNNSELLANLGNFVNRIVKFAIAKYNGVLPQY 607

Query: 381 GAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKK 438
                 + +  L+  + +L    +NM+   + + L   + + S  +++    K    L  
Sbjct: 608 DTKNIPNYDQFLTDINTLLGTYIKNMEAVNLRKGLETAMLISSRGNQFLQENKLDNTLYN 667

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
             PD++  V+ + + ++  ++ ++  F+P    KI +IL     +    +    L PG  
Sbjct: 668 EYPDKSDAVVAIGLNLVYLVSAVISPFMPDTTKKINEILNAPALSIT-NTFIPILSPGHH 726

Query: 499 LHKTFDPIFPRF 510
           + +    +F R 
Sbjct: 727 IGQA-QYLFTRI 737


>gi|298252448|ref|ZP_06976243.1| methionyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533338|gb|EFH72221.1| methionyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 623

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 141/583 (24%), Positives = 233/583 (39%), Gaps = 81/583 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + ++++    G IYKG   
Sbjct: 64  GVSAQELANRYNRVITKDLCDLGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQK 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 183

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L          L         +     GL +    R   +  DWGI +P   
Sbjct: 184 ETEHYFLDLPALAEANVNWLHSREGWRTNVINFSLGLFNEVKPRAITRDIDWGIPVPVEG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +             + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMGKDNITFHS 303

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEMLAYNGAGSKGGEAGIYGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  + P
Sbjct: 364 RYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLINKNFGAIPP 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D ++L   S     +   ++      AL + + +V+++++Y  A +PW++ 
Sbjct: 424 LDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD------- 490
           K + DR  TVL+V  + +     LL  F+P  A K+++ L           ++       
Sbjct: 483 KDDEDRLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEALGGTGVFSPLPHIEEVEDLDN 542

Query: 491 -----------------------QRLKPGFMLHKTFDPIFPRF 510
                                  + L  G  + K   PIF + 
Sbjct: 543 PDFKYPIITGDYRLGETVHPWESEELVAGTPVPKP-SPIFAKI 584


>gi|294786251|ref|ZP_06751505.1| methionine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294485084|gb|EFG32718.1| methionine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 623

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 132/583 (22%), Positives = 238/583 (40%), Gaps = 81/583 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  I   A   
Sbjct: 4   VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNEVLMVSGTDEHGTPILVQADAE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R        L +SYD F RTT K H +  + ++K+    G IYKG   
Sbjct: 64  GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHENVVQEMFKQCLKNGYIYKGTQM 123

Query: 126 GWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWMEEEGYFFR----LSAYQ 173
              S        D  +          GA G   +   N +  ++      +       +Q
Sbjct: 124 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNELDPIDLINPRSKINGETPVFQ 183

Query: 174 DKLLSYYE------SHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD- 223
           +    + +      ++  ++   +     +     GL +    R   +  +WGI IP D 
Sbjct: 184 ETEHYFLDLPALAEANYAWLKTRQGWRTNVINFSLGLFNEVEPRAITRDINWGIPIPVDG 243

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
               P   +YVW DA+  YL+ +             + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKRLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPQSPAYYFMGKDNITFHS 303

Query: 273 IYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L                 L +P +V +  F+  +G+K S S G VI   +++ 
Sbjct: 304 QIWPSEILGYNGQGSKGGEPGEFGELNMPTQVVASEFLSMEGKKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +L +  GNLV+R   ++ K++  +  
Sbjct: 364 RYQVDAVRYYISIAGPETSDSDFTWAEFVRHNNDELVSSWGNLVNRVAVLLHKNFGQIPA 423

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             P  F E D+++L +       +   +++     AL + + +V E+++Y  A +PW++ 
Sbjct: 424 VDPSDFQEEDKALLKMTEEGFASVGGLIEDHRQKAALTEAMRIVQEINKYISATEPWKV- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD------- 490
           K +P R + +LY + + +     +L  F+P  A K+++ L           ++       
Sbjct: 483 KDDPARLAAILYTSAQAVMDANTMLAPFLPHSAQKVYETLGGTGTFSPLPHVEEVTDLDD 542

Query: 491 -----------------------QRLKPGFMLHKTFDPIFPRF 510
                                  + L+PG  + K   P+F + 
Sbjct: 543 PDFSYPIITGNYRLGETVHAWEREELRPGTPIAKP-SPLFQKI 584


>gi|315225784|ref|ZP_07867572.1| methionyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|315119916|gb|EFT83048.1| methionyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 626

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 132/583 (22%), Positives = 238/583 (40%), Gaps = 81/583 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  I   A   
Sbjct: 7   VLVAVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNEVLMVSGTDEHGTPILVQADAE 66

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R        L +SYD F RTT K H +  + ++K+    G IYKG   
Sbjct: 67  GVSAQELADRYNRVIAQDLCNLGLSYDLFTRTTTKNHENVVQEMFKQCLKNGYIYKGTQM 126

Query: 126 GWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWMEEEGYFFR----LSAYQ 173
              S        D  +          GA G   +   N +  ++      +       +Q
Sbjct: 127 VAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNELDPIDLINPRSKINGETPVFQ 186

Query: 174 DKLLSYYE------SHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPDD- 223
           +    + +      ++  ++   +     +     GL +    R   +  +WGI IP D 
Sbjct: 187 ETEHYFLDLPALAEANYAWLKTRQGWRTNVINFSLGLFNEVEPRAITRDINWGIPIPVDG 246

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
               P   +YVW DA+  YL+ +             + W  D      + +GKD + FH+
Sbjct: 247 WIDNPNKRLYVWFDAVIGYLSASIEWARRQGDPDLWRQWWNDPQSPAYYFMGKDNITFHS 306

Query: 273 IYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L                 L +P +V +  F+  +G+K S S G VI   +++ 
Sbjct: 307 QIWPSEILGYNGQGSKGGEPGEFGELNMPTQVVASEFLSMEGKKFSSSRGIVIYVKDILA 366

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +L +  GNLV+R   ++ K++  +  
Sbjct: 367 RYQVDAVRYYISIAGPETSDSDFTWAEFVRHNNDELVSSWGNLVNRVAVLLHKNFGQIPA 426

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             P  F E D+++L +       +   +++     AL + + +V E+++Y  A +PW++ 
Sbjct: 427 VDPSDFQEEDKALLKMTEEGFASVGGLIEDHRQKAALTEAMRIVQEINKYISATEPWKV- 485

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD------- 490
           K +P R + +LY + + +     +L  F+P  A K+++ L           ++       
Sbjct: 486 KDDPARLAAILYTSAQAVMDANTMLAPFLPHSAQKVYETLGGTGTFSPLPHVEEVTDLDD 545

Query: 491 -----------------------QRLKPGFMLHKTFDPIFPRF 510
                                  + L+PG  + K   P+F + 
Sbjct: 546 PDFSYPIITGNYRLGETVHAWEREELRPGTPIAKP-SPLFQKI 587


>gi|328948204|ref|YP_004365541.1| methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448528|gb|AEB14244.1| Methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 775

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 107/529 (20%), Positives = 212/529 (40%), Gaps = 56/529 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K   +  +++A+ Y N  PH+G+  +M+ ADV ARF R  G + L+  GTDE+G     
Sbjct: 4   IKNLNRRLVTSALPYVNNIPHLGNLIQMLSADVFARFCRSRGYETLYVCGTDEYGTATET 63

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D   +   ++    DI++D F RT+ +   +  + ++K +   G I 
Sbjct: 64  RAVEEKKTPRELCDYYYKQHDEIYKWFDIAFDKFGRTSNEECTEITQAMFKDLDKNGFIK 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +      +    + +  D  V+           +G       +  +PV+           
Sbjct: 124 EHTNKQLFCPSCQMFLADRYVHGVCPKCGFEDARGDQCDKCGSLLDPVELKSPRCATCGS 183

Query: 165 -YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +    L     + +                 N   ++++ GL + +++R   
Sbjct: 184 TPEIRETRHLYIDLPSISKNLDSWMNKTSKEGRWSDNAINITKAWIRDGLNERAITRD-L 242

Query: 215 DWGIKIPD--DPQYIMYVWIDALTNY-------------------LTTTGYLDNPDGSKA 253
            WGI +P       + YVW +A   Y                      + +L        
Sbjct: 243 KWGIPVPKAGYENKVFYVWFNAPIGYISITKQLADELIAASKPSFDWKSWWLPEESEEAK 302

Query: 254 KFWPAD-LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNV 310
              P D    IGKD + FH + +P   + +     K   + S  ++ ++  K SKS G  
Sbjct: 303 NKPPVDLFQFIGKDNIPFHTVIFPCSQIGSGHNFTKLFHMSSTEYLNYEDGKFSKSRGVG 362

Query: 311 IDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +   +  E  +  DA R+++       +D  +     ++R N +L   +GNLV+R++  +
Sbjct: 363 VFGTDAKESGIKADAWRFYIFYNRPEKQDYQFTWKEFRERYNGELIGNLGNLVNRTLLFV 422

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K YD  IP        DE + +       +  + ++   +  A  +V  +    ++ F 
Sbjct: 423 QKYYDSKIPDA----PVDEKLWAQVKEHEAKATDYLEWANLKDAFHEVFVISDIGNKAFQ 478

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +PW+ ++T+P+RA+ +++    +I+ L I+   ++P+ A KI     
Sbjct: 479 DTEPWKTRETHPERAAKLIHNLCYMIKDLMIMAHPYMPQFAEKIMSYFG 527


>gi|251797136|ref|YP_003011867.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247544762|gb|ACT01781.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 551

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 131/539 (24%), Positives = 221/539 (41%), Gaps = 46/539 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            ++I  A  Y N   H+G    ++  DVLAR+ R  G  VL+ +G+D HG  +A  A   
Sbjct: 3   PIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKGNPVLYVSGSDCHGTPVAVQALQE 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+     D+  + F D    L  +Y+ + RT ++ HH   + L+  + + G +YK    
Sbjct: 63  GVSPGDIADRYHQEFTDCFQKLGFTYNLYTRTDQEFHHKVVKELFISLLENGYLYKKTIQ 122

Query: 126 GWYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWME 161
             Y   D  +  D  V                                     NP     
Sbjct: 123 QTYCETDRRFLPDRYVEGTCPVCGNRARGDQCDYCSTLLDPADLTDKTCKICGNPPVERP 182

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E Y+  LS +QD L  Y +    +            +++ GLKD +++R    WG+ +P
Sbjct: 183 TEHYYISLSLFQDVLSEYVDHADGWK--DNAVQITKRYLREGLKDRAVTRD-LTWGVDVP 239

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYL-------DNPDGSKAKFWPADLHVIGKDILRFHA 272
                   +YVWI+A++ YL+ +                + K      +V GKD + FH 
Sbjct: 240 VKGFEDKKIYVWIEAVSGYLSASKQWAAETGGSWELFWQEGKHQLTAYYVHGKDNVPFHT 299

Query: 273 IYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + WPA LL A  L LP ++ S  ++  +G+K S S    +   +++     D++RYFL+ 
Sbjct: 300 VIWPALLLGARGLHLPDRIISCEYMTLEGKKFSTSNNWAVWVPDILSRYQPDSIRYFLIA 359

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +         N +L    GNLV+R++S I K ++G+IP       +DE   
Sbjct: 360 NGPENRDTDFSWREFIHSHNGELLGAFGNLVNRTLSFIDKSFEGLIP---EGNLNDEW-K 415

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                        ++   +  A+  + + V   ++YFD +KPW   K +       L+ +
Sbjct: 416 QTIDDCYTRSGALIEEGHLKEAIEHIFASVRRANKYFDERKPWLQIKEDKAACGNTLHAS 475

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           V++I  L+ LL  F+P    +I   L +      F S+     P     +    +F R 
Sbjct: 476 VQIIANLSRLLNPFIPFACEEIRKFLTLDQPGWTFTSV-----PANRKIRNLKILFERI 529


>gi|317124049|ref|YP_004098161.1| methionyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588137|gb|ADU47434.1| methionyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 607

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 135/539 (25%), Positives = 229/539 (42%), Gaps = 55/539 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   KVLSAVAWPYTNGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVLAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+ +R        L +SYD F RTT   H+   + L+      G + +   
Sbjct: 63  EGMTPQEVTDKYNRVIATDLTELGLSYDLFTRTTTANHYAVSQELFSGNWRNGYMIEQTT 122

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPV-----------------QW 159
            G  S        D  +             G   +   N +                 ++
Sbjct: 123 KGAISPSTGRTLPDRYIEGTCPICGYGEARGDQCDNCGNQLDAEELINPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E + +F  L A    L  + +             +    +   ++  +++R   DWGI 
Sbjct: 183 IETQHFFLDLPALATALAEWLDGREGSGTWRPNVIKFARNLLDDVRPRAMTRD-IDWGIP 241

Query: 220 IPDDPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           IP +         +YVW DA+  YL+ +        D  + + W  D      +  GKD 
Sbjct: 242 IPLEGWQDNTHKRLYVWFDAVVGYLSASIEWARRVGDPERWREWWNDPEAVSYYFQGKDN 301

Query: 268 LRFHAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FHA  WPA LL                 L LP +V +  F+  +G++ S S G+VI  
Sbjct: 302 ITFHAQIWPAELLGYAGLGEKGGSAGAYGTLNLPTEVVASEFMTMEGKQFSTSRGHVIYV 361

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V+E  G D LRYF+       +D  +      +R N++L  G GNLV+R+ SMI K +
Sbjct: 362 RDVLERYGPDPLRYFICAAGPENQDSDFTWAEFIQRNNSELVAGWGNLVNRTASMIAKSF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
              IP  G     DE++L+        +   ++ Q   + + +V+ +V E +RY    +P
Sbjct: 422 G-EIPAAGPLEPVDEALLTAVREAFDVVGGLIERQRFKQGIGEVMRVVGEANRYVAETEP 480

Query: 434 WELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           ++LK  +  +R  TVL+V  + +  +  L+  F+P  +N++  ++    +      L++
Sbjct: 481 FKLKGDDERERLGTVLHVLAQAVVSINTLMAPFLPHGSNRVHRVMGGEGDFVPMPVLEE 539


>gi|254477821|ref|ZP_05091207.1| methionyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214032064|gb|EEB72899.1| methionyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 578

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 116/560 (20%), Positives = 233/560 (41%), Gaps = 52/560 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +  +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG    
Sbjct: 3   MDDMARFLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGNEVMFLCATDEHGTPAE 62

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +  +       +A    +S+D F R++  ++H   +    K+++ G I
Sbjct: 63  LAAAKAGKPVAEYCAEMHEVQAGIAKGFGLSFDHFGRSSSPQNHALTQHFAGKLAEAGLI 122

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE------ 162
            +      YS  D+ +  D  V            +G   +    Q +P   +E       
Sbjct: 123 REVEDRQVYSHADKRFLPDRYVEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISG 182

Query: 163 ---------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    +  +   S  +D+L ++ +S  ++ +      +       GL+D  ++R  
Sbjct: 183 STDLEVRATKHLYLCQSQLKDELDAWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD- 241

Query: 214 FDWGIKIPDDPQ-------YIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD--- 259
            DWGI +    Q        + YVW DA   Y+             D    ++W  D   
Sbjct: 242 LDWGIPVKKGDQDWPGMEGKVFYVWFDAPIEYIAAAGEWAEANGKSDAEWERWWRTDKGA 301

Query: 260 -----LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID 312
                +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  + 
Sbjct: 302 EDVKYVQFMGKDNVPFHTLSFPATILGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVF 361

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        
Sbjct: 362 MDQALEILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 421

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           Y   +P  G++ E++++++   +  ++   ++M    + ++  ++ ++    + Y  +  
Sbjct: 422 YGEEVPAGGSYGEAEQTLIKELTTRIRAYEDHMAAMEVRKSAQELRAIWVAGNEYLQSVA 481

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLD 490
           PW   KT+P++A+  + + + +IR  A+L   F+P   + +   +   D++      +  
Sbjct: 482 PWSTFKTDPEQAAAQVRLGLNLIRLYAVLSSPFIPTAKDTLLAAMQTEDDSWPTDVAAAL 541

Query: 491 QRLKPGFMLHKTFDPIFPRF 510
             L  G       + +F + 
Sbjct: 542 DALPVGHAFT-VPEVLFAKI 560


>gi|161528471|ref|YP_001582297.1| methionyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339772|gb|ABX12859.1| methionyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 551

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 140/541 (25%), Positives = 239/541 (44%), Gaps = 45/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K  I++A+ Y N + H+GH A   + ADV  RF + +G++  +   +D+ G  I   ++
Sbjct: 3   KKAIITSALPYANGEIHLGHVASTYLPADVTTRFLKQNGVEAYYVCASDDFGTPILIQSE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T   +V   ++   +     DI +D F +T+   +    + ++KK++D G IY+  
Sbjct: 63  KEGKTPAEYVAHWNKRDYEDFSAFDIDFDYFYKTSSDENIQFVQDVFKKLNDAGHIYEQE 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY-----------------------YNAQHNPVQWM 160
              +Y   D+ +  D  V                                +    P    
Sbjct: 123 IIQFYCNNDKKFLPDRYVKGTCPYCKAEDQYSDLCESCGRVPEEITNPKCSLCGQPPTKE 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           +   YFF+L  + + L  + + +    L  + +  V +++KSGL D  ++R    WG+ +
Sbjct: 183 KTTHYFFKLKNFGEPLSKWLDEND--HLQKDVKKYVQNWIKSGLIDWDITRD-ITWGVPV 239

Query: 221 PDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
           P D     + Y W D    Y++T     N  G   K +       H IGKDI+  H ++ 
Sbjct: 240 PLDDAKDKVFYGWFDNHLAYISTALKFLNDKGIDGKEFWNSADIYHFIGKDIVYHHYLFL 299

Query: 276 PAFL--LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA    + +   LP  + + G +  + +KISKS    I   E +E    D LR++LV   
Sbjct: 300 PAMRLGIESEYKLPDYIPTRGHLTLQAKKISKSRNWYIGLKEFLEYYPADYLRFYLVSIN 359

Query: 334 ACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D   +D D    R+N++L   +GN ++R++    K +DG IP P  F E D     
Sbjct: 360 PYSQDDLNFDWDDFTTRINSELIGNLGNFINRALGFTKKAFDGNIPDPEDFDEKDSEAEQ 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +  E+   M+   + RAL +++   S  ++YF  ++PW   K  P  AS V Y++V
Sbjct: 420 KIKSLASEVGSLMEQNHLDRALKKIMEFSSYFNQYFQHKEPW---KKGPGTASCV-YLSV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
             +R LAI    F+PK A  I+  L     + D+N    S+   +  G  L     P+F 
Sbjct: 476 NAVRSLAIATFPFIPKSAQNIWTQLALDGKINDQNWNDMSV-LGVSSGHTLG-DASPLFA 533

Query: 509 R 509
           R
Sbjct: 534 R 534


>gi|332161115|ref|YP_004297692.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665345|gb|ADZ41989.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 635

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 125/506 (24%), Positives = 215/506 (42%), Gaps = 47/506 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
             + +   +++ ++   G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P +                E E +FF L A+ D L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SK 252
           ++  + +SGL+   +SR    +G +IPD P    YVW+DA   Y+     L +  G    
Sbjct: 178 KMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDF 237

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +FW  D      H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS 
Sbjct: 238 DEFWRKDSEADLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSR 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  I     ++ +  D LRY+   +++    D   + +   +RVNAD+ N + NL SR+ 
Sbjct: 298 GTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNA 357

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +    A   +D ++    +     I +   N+   +A+ ++++L    +R
Sbjct: 358 GFINKRFAGKL----ADHLADPALYKTFTDAATSIADAYSNRESSKAIREIMALADIANR 413

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D Q PW + K          +  + + + R L   L+  +P L  +    L       
Sbjct: 414 YVDEQAPWVVAKEEGRDADLQAICSMGINLFRVLMTYLKPVLPALTERTEAFLNTE---L 470

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + S++Q L  G  ++  F  +F R 
Sbjct: 471 TWDSIEQPLL-GHQINA-FKALFNRI 494


>gi|324998150|ref|ZP_08119262.1| methionyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 596

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 145/523 (27%), Positives = 229/523 (43%), Gaps = 58/523 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G  VL  +GTDEHG  I   A   G+T 
Sbjct: 9   VAWPYANGPRHIGHVSGFGVPSDVFARYRRMAGDRVLMVSGTDEHGTPIQVQADAEGLTP 68

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +         L +SYD F RTT   H++  + ++  +   G I         S
Sbjct: 69  RQLADKYNDVITRDLQGLGLSYDLFTRTTTSNHYEVVQHMFTALYKNGYIVPRTQLAAIS 128

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QWMEEEG 164
                     Y        G DG   +   N                       ++E E 
Sbjct: 129 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPADLKNPRSKINGETPSFVETEH 188

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           +F  L A+ + L S+  +  ++   + + +  ++     LK  +++R   +WG+ +P D 
Sbjct: 189 FFLDLPAFSEALGSWLSTRTDWRPNVLKFSANLA---ENLKPRAITRD-LEWGVPVPLDG 244

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD-----LHVIGKDILRFHA 272
               P   +YVW DA+  YL+ +       PD    K W  D      + +GKD + FH+
Sbjct: 245 WSDNPMKKIYVWFDAVIGYLSASVEWARRGPDPDAWKQWWTDPEAQAFYFMGKDNITFHS 304

Query: 273 IYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           + WPA LL                 L LP +V S  ++   G K S S G VI   + + 
Sbjct: 305 VMWPAILLGHNGQGDRGGDPGRYGKLDLPSEVVSSEYLTMLGSKFSTSRGTVIYVGDFLR 364

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E G DALRY +       +D  +  D   +RVN +LAN  GNLV+RSVSM  K+    IP
Sbjct: 365 EFGPDALRYHIAVAGPENQDVDFTWDEFVRRVNFELANEWGNLVNRSVSMAHKNVG-AIP 423

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P A  ++D  +L+V       +   +      +A  + + +V+  +RY   Q+PW+ +K
Sbjct: 424 APTAPQQADAELLAVSRAGFDTVGGLLARNRFKQAAGEAMRVVTAANRYLSDQEPWK-RK 482

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +P+R  T+L+  ++V++    LL  F+P  A K+ + L  A 
Sbjct: 483 DDPERRDTILHTALQVVQDANTLLTPFLPHSAQKVHEALGGAG 525


>gi|262341096|ref|YP_003283951.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272433|gb|ACY40341.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 561

 Score =  299 bits (765), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 130/540 (24%), Positives = 245/540 (45%), Gaps = 43/540 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK+  K  ++ A+ Y N   HIGH A     ADV  R+ R    DV+F  G+DEHG  IA
Sbjct: 1   MKKSNKYTVTAALPYANGPIHIGHLAGVYFPADVFVRYLRRKNKDVIFICGSDEHGVPIA 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+    T +  V++     +D      I +D++ RT+ + H++     +KK+ +K  I
Sbjct: 61  MQAKREKKTPQEIVNKYHHMIQDCFTNFGIQFDNYSRTSTEIHYEISTSFFKKLHEKEKI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ---------- 158
           ++     +Y    + +  D  +             G   +   +   P            
Sbjct: 121 FEKESEQYYDEEAKQFLADRYISGQCPHCKKEEAYGDQCENCGSSLIPEDLIHPKSTISG 180

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
               + + + ++F L+ YQ  L  +   + +    +    +  S++  GLK  +++R   
Sbjct: 181 SFPVFKKTKHWYFPLNEYQKFLEKWILINHQTDWKVNVYGQAKSWLDQGLKPRAITRD-L 239

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           +WG+ +P   +   ++YVW +A   Y+++T           K +  D     +  IGKD 
Sbjct: 240 NWGVPVPILQEKGKVLYVWFEAPIGYISSTIEWSKRKKIDWKPYWKDKKTKLIQFIGKDN 299

Query: 268 LRFHAIYWPA--FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VD 323
           + FH I +P           LP K+ ++ F+  + +KIS S    +   E +E+     D
Sbjct: 300 IVFHCIIFPVILKAYDGGYILPDKILANEFLHLENKKISTSKNWAVWGHEYLEDFPNQQD 359

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LRY L+  +   KD  ++    +++ N +L   +GN V+RS++++ K  +G++P PG  
Sbjct: 360 TLRYILIANMPEKKDNNFNWKDFQRKNNTELVAILGNFVNRSLTLVKKYNNGIVPNPGIL 419

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +  D+ IL       + I + +++     ALA  ++L    ++Y   ++    KK    R
Sbjct: 420 SIEDKKILKKIKNYPESIGDFIESYKFREALACFMNLAKLGNKYLTEEE--PWKKEEKKR 477

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKT 502
             T+LYV+++++  LA L + F+P  A K+ D+L +      +  + ++ L PG +L   
Sbjct: 478 VETILYVSLQIVGMLAQLAEPFLPHTAKKLLDMLRLKTFF--WNQIKEKILCPGHLLGNP 535


>gi|33415345|gb|AAQ18197.1| probable methionyl-tRNA synthetase [uncultured bacterium]
          Length = 701

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 141/554 (25%), Positives = 224/554 (40%), Gaps = 61/554 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L+++TA+ Y N   HIGH  E I AD+  RF R  G  V F    D HG  I  AA+ 
Sbjct: 3   RQLFVTTALPYANGHFHIGHIMEYIQADIWVRFQRQQGHRVHFVGADDAHGAPIMIAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + FV   +   +   D   I++D +  T    +H   + ++  + D G I     
Sbjct: 63  AGKTPQQFVADIAAGRKPYLDGFHIAFDHWSSTDSPENHSLAKEIYVALRDAGLITVRPV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G   +   A + P                 
Sbjct: 123 EQFFDPEKSMFLPDRFIKGECPKCGAKDQYGDSCEVCGAVYAPTDLKNPYSALSGATPVR 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-----GLKDLSLSRKTF 214
              + YFF+LS  +        +    +           F K      GL D  +SR   
Sbjct: 183 KSSDHYFFKLSDPRCAEFLEAWTQDGKLQSEVGNKIREWFTKDENGEGGLSDWDISRDAP 242

Query: 215 DWGIKIPD----DPQYIMYVWIDALTNY-----------LTTTGYLDNPDGSKAKFWPA- 258
            +GI+IPD     P    YVW+DA   Y                Y +     +    PA 
Sbjct: 243 YFGIQIPDLPEGSPAKYFYVWLDAPVGYLASLKSYFAAGGPKARYGEARSFDEFIADPAV 302

Query: 259 -DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP-IEV 316
             +H IGKDI  FH ++WPA L  +   LP +V  HG +   GEK+SKS G  +DP   +
Sbjct: 303 EQVHFIGKDITYFHTLFWPAMLKFSGRKLPSQVNVHGHLTVGGEKMSKSRGTGLDPIKYL 362

Query: 317 IEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
              +  + LRY++  ++    +D  ++ +    RVN+DL     N+ SR  + I K ++G
Sbjct: 363 KLGMNPEWLRYYIAAKLNSKVEDVDFNPEDFVARVNSDLVGKYVNIASRCSTFIHKYFEG 422

Query: 376 MIPTPGAFTE--SDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            +    A  E    E I L   +    +I + +  +   +AL  +++   E+++YFD  K
Sbjct: 423 KLAHLDAPDEGKLQEMIPLQAVTSREAQIADALDKREFGKALRDIMAAADEINQYFDTAK 482

Query: 433 PWELKKTNPD-----RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           PWEL K +           VL   +E  + L + L   +P ++ + F  L   D+   + 
Sbjct: 483 PWELAKDSAQHTPNSALHEVLSACIEGFKYLTLFLSPILPDVSGRAFHFLGF-DQPLDWA 541

Query: 488 SLDQRLKPGFMLHK 501
               R KP   + K
Sbjct: 542 ---GRAKPVTTIRK 552


>gi|83955735|ref|ZP_00964315.1| methionyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83840029|gb|EAP79205.1| methionyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 570

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 116/553 (20%), Positives = 224/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGQEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A+   +S+D F R++  ++    +     + D+G I +   
Sbjct: 63  AGKPVAEYCAEMHEVQARIAEGFGLSFDHFGRSSSAQNKALTQHFAAALYDQGLIEEVEQ 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP---------------VQ 158
              YS  D  +  D  V            +G        Q +P               ++
Sbjct: 123 RQIYSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F R S  +DKL  +  S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 MRATKHLFLRQSQMKDKLDEWINSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+       +         +W  D          
Sbjct: 242 PVKRGDADWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIMGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPETSDAEFTWENFQSSVNKDLADVLGNFISRITKFCRSKFSEDVPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G +   + ++++  +  +   +  M+   + ++ A++ ++ +  + Y  AQ PW   KT
Sbjct: 422 AGEYGPEEHALIADLTERVARYQNAMEAMEVRKSAAELRAIWAAGNEYLQAQAPWTTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +PD+A+  + + + +I   A+L   F+P  A  + D + V +        +   +L PG 
Sbjct: 482 DPDKAAAQVRLALNLIPLYAVLSAPFIPTAAASMLDSMKVENAAWPDDVPAALAQLAPGH 541

Query: 498 MLHKTFDPIFPRF 510
              +  + +F + 
Sbjct: 542 TF-EVPEVLFAKI 553


>gi|89898167|ref|YP_515277.1| methionyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123735920|sp|Q255A6|SYM_CHLFF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|89331539|dbj|BAE81132.1| methionyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 551

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 135/506 (26%), Positives = 223/506 (44%), Gaps = 36/506 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +V+   +  +D  D L IS D F RTT   H       + ++  KG I     
Sbjct: 64  AGLGYQEYVNMYHKIHKDTFDKLKISLDFFSRTTNPFHKALVEDFYTQLKSKGLIENQTS 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLS------ 170
              YS  +  +  D  V        + GA G          +  +      +LS      
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPRCGFDGARGDECQKCGADYEATDLIHPRSKLSGSELVL 183

Query: 171 --------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                     +  +    +   +  LP   R  ++ ++K  L+  +++R    WGI +PD
Sbjct: 184 KETEHAYFHLERMVEPLLDFIDKSYLPEHVRKFIVDYIK-NLRPRAITRD-LSWGIPVPD 241

Query: 223 DPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFW----PADLHVIGKDILRFHAIYW 275
            P  + YVW DA   Y++ T       N   +   FW       +  IGKD + FHA  +
Sbjct: 242 FPNKVFYVWFDAPIGYISGTMDWAASVNNPEAWKDFWLEESTEYVQFIGKDNIPFHAAIF 301

Query: 276 PAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA  L  ++P  K   + S  F L +G + SKS GN ID    ++   +D LRY L    
Sbjct: 302 PAMELGQSIPYKKMDALISSEFYLLEGAQFSKSEGNYIDMDAFLDTYSLDKLRYVLAATA 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILS 392
               D  +     K R N++L    GN ++R ++   K+ +  ++ +     + D+  L 
Sbjct: 362 PETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELVYSETLLEDKDKKFLD 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVT 451
              R++QE RE+     + +A + ++ L +  + Y + Q PW+L K     R   VL+  
Sbjct: 422 DAQRIVQEAREHYSKYSLRKACSAIMELAALGNIYVNDQAPWKLLKEGLAHRVEAVLFCA 481

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
               + LA++    +P  A +I+++L
Sbjct: 482 CYCQKLLALISYPILPGTAWEIWNML 507


>gi|283783692|ref|YP_003374446.1| methionine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441551|gb|ADB14017.1| methionine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 625

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 140/583 (24%), Positives = 232/583 (39%), Gaps = 81/583 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 6   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 65

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + ++++    G IYKG   
Sbjct: 66  GVSAQELANRYNRVITKDLCDLGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQK 125

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYFFR 168
              S          Y        GADG   +               NPV  +  E   F 
Sbjct: 126 VAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 185

Query: 169 LSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            + +    L          L         +     GL +    R   +  DWGI +P   
Sbjct: 186 ETEHYFLDLPALAEANVNWLHSREGWRTNVINFSLGLFNEVKPRAITRDIDWGIPVPVEG 245

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +             + W  D      + +GKD + FH+
Sbjct: 246 WIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPEAWRDWWCDPKSPGYYFMGKDNITFHS 305

Query: 273 IYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   +++ 
Sbjct: 306 QIWPSEMLAYNGAGSKGGEAGIYGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKDILA 365

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++  + P
Sbjct: 366 RYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWGNLVNRVANLINKNFGVIPP 425

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + T  D ++L   S     +   ++      AL + + +V+++++Y  A +PW++ 
Sbjct: 426 LDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAMRVVADINKYISATEPWKI- 484

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD------- 490
           K +  R  TVL+V  + +     LL  F+P  A K+++ L           ++       
Sbjct: 485 KDDEARLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEALGGTGVFSPLPHIEEVEDLDN 544

Query: 491 -----------------------QRLKPGFMLHKTFDPIFPRF 510
                                  + L  G  + K   PIF + 
Sbjct: 545 PDFKYPIITGDYRLGETVHPWESEELVAGTPVPKP-SPIFAKI 586


>gi|255560103|ref|XP_002521069.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223539638|gb|EEF41220.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 617

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 117/561 (20%), Positives = 228/561 (40%), Gaps = 60/561 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +  + I++A+ Y N  PH+G    ++  DV AR+ RL G +VL+  GTDE+G      A
Sbjct: 25  GKRNVLITSALPYVNNVPHLG----VLNGDVFARYCRLRGHNVLYICGTDEYGTATETKA 80

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+     +++ D  DIS+D+F RT+  +  + C+ ++KK+ +   + + 
Sbjct: 81  MEENCTPQEICDKYHAIHKEVYDWFDISFDEFGRTSTPQQTEICQAIFKKLMENNWLSEN 140

Query: 123 CYSGWYSLRDEAYYNDDEVY-------------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
                Y    E +  D  V              +G   +      NP + +       + 
Sbjct: 141 IMQQLYCDTCERFLADRFVEGTCPTLGCDYDSARGDQCEKCGKFLNPTELINPRCKVCQT 200

Query: 170 SAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           +       + +               E                ++++ GLK   ++R   
Sbjct: 201 TPRTRDTNNLFLELPLLKDNLQSYISEMSVTGSWSQNAIQTTHAWLRDGLKPRCITRD-L 259

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P +     + YVW DA   Y++ T     PD  K    P ++     +GKD + 
Sbjct: 260 KWGVPVPLEKFKDKVFYVWFDAPIGYISITS-CYTPDWEKWWKNPENVELYQFMGKDNVP 318

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA-LR 326
           FH + +P+ L+    N  L K +    ++ ++  K SKS G  +   +  +        R
Sbjct: 319 FHTVMFPSTLIGTRENWTLMKNISVTEYLNYESGKFSKSKGVGVFGNDARDAHHPAEVWR 378

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL----KDYDGMIPTP-- 380
           Y+L+       D  +  +  + ++N +L + +GN + R +S I     K Y  +IP    
Sbjct: 379 YYLLANRPEISDTIFTWEDFQAKLNNELIHNLGNFIHRVLSFIANTSGKGYGTVIPDAPG 438

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                         + ++ E  + M    + + L   +S+    + Y  A + + L + +
Sbjct: 439 AESHPLTIKFAIDVTNLVDEYVKAMDQVKLKQGLKCAMSISGAGNTYLQASQYFRLYEED 498

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA--------DENRCFQSL--- 489
               S V+  +V V+  LA LL+ F+P  ++K+F +L +         +E+ C +     
Sbjct: 499 QASCSIVVRTSVGVVCILARLLEPFMPSFSHKVFKLLKLPPETTFSLSEEDDCLERAKRP 558

Query: 490 DQRLKPGFMLHKTFDPIFPRF 510
            + +  G  + K + P+F + 
Sbjct: 559 WEVIPSGHTIEKLY-PLFMKL 578


>gi|189440393|ref|YP_001955474.1| methionyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|312133725|ref|YP_004001064.1| metg [Bifidobacterium longum subsp. longum BBMN68]
 gi|189428828|gb|ACD98976.1| Methyonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|311773001|gb|ADQ02489.1| MetG [Bifidobacterium longum subsp. longum BBMN68]
          Length = 617

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 139/542 (25%), Positives = 230/542 (42%), Gaps = 53/542 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+
Sbjct: 2   VNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGL 61

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG- 126
           T +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG     
Sbjct: 62  TAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVA 121

Query: 127 ----------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLS 170
                        +  E      E  +G        +       NPV  +  E   F  +
Sbjct: 122 ISPSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQT 181

Query: 171 AYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP----- 221
            +    L       +  L   +     +     GL      R   +  DWGI +P     
Sbjct: 182 EHYFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKDWI 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D+P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+  
Sbjct: 242 DNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQI 301

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WP+ +L+ N              L LP++V +  F+  +G+K S S G VI   +++   
Sbjct: 302 WPSEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARY 361

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-T 379
            VDA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P  
Sbjct: 362 PVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPPLD 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ K 
Sbjct: 422 EDSMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI-KD 480

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPG 496
           +  R  TVL+V  + +     LL  F+P  A K+++ L           L +     KPG
Sbjct: 481 DQARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDKPG 540

Query: 497 FM 498
           F 
Sbjct: 541 FT 542


>gi|320537817|ref|ZP_08037738.1| methionyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145356|gb|EFW37051.1| methionyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 774

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 117/541 (21%), Positives = 219/541 (40%), Gaps = 48/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  I++A+ Y N  PH+G+  +++ ADV ARF RL G   L+  GTDE+G      A  
Sbjct: 2   KRKLITSALPYVNNIPHLGNLLQVLSADVFARFCRLKGYKTLYICGTDEYGTATETKALQ 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +   D       D+ +  +I++D F RT+  +  +  + ++  +   G I +   
Sbjct: 62  EGKTPQQLCDYYHAIHSDIYNWFNIAFDYFGRTSTPQQTEITQQIFLDLEKNGFITEHEM 121

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFF--------- 167
              Y  +   +  D  V             G         +   E +             
Sbjct: 122 QQLYCPQCRRFLADRYVRGTCPHCSYEDARGDQCEQCGKLLDPTELKNPQCATCGGTPEP 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTFDWGI 218
           + + +    L    S  +  +    +N            S+++ GL++ +++R    WGI
Sbjct: 182 QTTKHLYINLPAIISQYQPWMEEASKNGEWSNNALQMTKSWIRDGLQERAITRD-LQWGI 240

Query: 219 KIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRF 270
            +P     + + YVW DA   Y++ T    +  G   K W  D         IGKD + F
Sbjct: 241 PVPKAGYEKKVFYVWFDAPIGYISITKSFTDITGGDWKSWWLDQKDVELFQFIGKDNIPF 300

Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +P  L+ +     K   + S  ++ ++  K SKS G  +   +  E  +  D  R+
Sbjct: 301 HTVIFPCSLIGSGQNWTKLFHMSSTEYLNYESGKFSKSKGVGVFGSDAKESGIPADMWRF 360

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG------ 381
           +L        D  +     ++RVN++L     NLV+R+ S I + Y+G IP         
Sbjct: 361 YLFYNRPEKNDTQFTWKDFQERVNSELIGNFCNLVNRTFSFISRYYNGCIPEVDGTQSSR 420

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               E  + +        + I + M    +     Q+  L S  ++ F   +PW+ +  +
Sbjct: 421 ADVAEPIKQLRKAVESYKKSITDLMDWANLRDGFHQIFELSSIANKAFQDGEPWKNRDAD 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P++   +L      I+ L IL+ +F+P+ A++    L +   +    ++    KP + + 
Sbjct: 481 PEKTEALLSELCYFIKDLLILIHSFMPEYASQAASFLGIKIWS---GNVFNEQKPDYTIP 537

Query: 501 K 501
           K
Sbjct: 538 K 538


>gi|238793464|ref|ZP_04637089.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727237|gb|EEQ18766.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 635

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 121/506 (23%), Positives = 212/506 (41%), Gaps = 47/506 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
             + +   +++ ++   G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCE 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P +                E E +FF L A+ D L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SK 252
           ++  + +SGL+   ++R    +G ++PD P    YVW+DA   Y+ +   L +  G    
Sbjct: 178 KMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLDF 237

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +FW         H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS 
Sbjct: 238 DEFWREGSETDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNIFVHGYVTVNGAKMSKSR 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  I     ++    D LRY+   +++    D   + +   +RVN D+ N + NL SR+ 
Sbjct: 298 GTFIKASTYLQHFDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNTDIVNKVVNLASRNA 357

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +        +D ++    +     I +   ++   +A+ ++++L    +R
Sbjct: 358 GFINKRFGGKLADK----LADPALYKTFTDAAVSIADAYNSRESGKAIREIMALADIANR 413

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D Q PW + K          V  + + + R L   L+  +P L  +    L       
Sbjct: 414 YVDEQAPWVIAKEEGRDADLQAVCSLGINLFRVLMTYLKPVLPSLTERTEAFLNTE---L 470

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + S+ Q L  G  ++ TF  +F R 
Sbjct: 471 TWDSIQQPLL-GHQVN-TFKALFNRI 494


>gi|161899027|ref|YP_614191.2| methionyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|187649779|sp|Q1GEI7|SYM_SILST RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 573

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/531 (21%), Positives = 226/531 (42%), Gaps = 51/531 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+     + AD+ AR++R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D + R++  ++H   +    K+ + G I +   
Sbjct: 63  AGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  D  +  D  +            +G   +    Q +P                +
Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F R SA +D+L  + +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLFLRQSAMRDQLDQWIDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD-------- 259
            +             + YVW DA   Y+             D    ++W  D        
Sbjct: 242 AVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGADDVKY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA LL +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G + E +++++   S  +     +M+   + ++  ++ ++    + Y  +  PW + 
Sbjct: 422 PDGGTWGEQEQTLIEELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           K +P+RA+  + + + +IR  A+L   F+P  ++++F  L    E+R +  
Sbjct: 482 KEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGT--EDRSWPE 530


>gi|302205819|gb|ADL10161.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276054|gb|ADO25953.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 610

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 150/524 (28%), Positives = 230/524 (43%), Gaps = 53/524 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A  
Sbjct: 4   RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGADVLMVSGTDEHGTPLLVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+ +R   +    L +SYD F RTT + H+   + L+K + + G + K   
Sbjct: 64  EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYSVVQELFKGLYENGYMIKETT 123

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYFF 167
            G  S          Y        GADG   +   N            PV  +  E   F
Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPQF 183

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIPD 222
             + +    L          L   R++   + +K  L  L   R        DWGI IP 
Sbjct: 184 IETEHFLLDLPALADALADWLKE-RQDWRPNVLKFSLNLLEDLRPRAMSRDIDWGIPIPV 242

Query: 223 DPQ-----YIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRF 270
           +         +YVW DA+  YL+ +             K W  D      + +GKD + F
Sbjct: 243 EGWEDNGAKKLYVWFDAVVGYLSASIEWAYRIGKPDAWKEWWTDPAASSYYFMGKDNITF 302

Query: 271 HAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WPA                    L LP +V S  F+   G K S S G VI   + 
Sbjct: 303 HSQIWPAELLGYQGKGARAGKLHTFGELNLPTEVVSSEFLTMSGSKFSSSKGIVIYVKDF 362

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++   
Sbjct: 363 LREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAYKNFG-E 421

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +PTPG  TESD+ IL + +   + + + + +    + +   + +V E + Y   Q+PW+L
Sbjct: 422 VPTPGELTESDQRILKLSAEAFEVVGDALAHSRFKQGITHAMHVVGEANAYIAEQEPWKL 481

Query: 437 KKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K     +R +TVL+  ++V+    +LL  ++P ++ ++ + L 
Sbjct: 482 AKDETQRERLATVLWTALQVVSDCNVLLTPYLPHISQQVHETLG 525


>gi|239621089|ref|ZP_04664120.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239516011|gb|EEQ55878.1| methionyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 616

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 139/540 (25%), Positives = 228/540 (42%), Gaps = 53/540 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+T 
Sbjct: 3   VAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTA 62

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG       
Sbjct: 63  QELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVAIS 122

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAY 172
                      +  E      E  +G        +       NPV  +  E   F  + +
Sbjct: 123 PSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEH 182

Query: 173 QDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP-----DD 223
               L       +  L   +     +     GL      R   +  DWGI +P     D+
Sbjct: 183 YFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKGWIDN 242

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+  WP
Sbjct: 243 PNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQIWP 302

Query: 277 AFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           + +L+ N              L LP++V +  F+  +G+K S S G VI   +++    V
Sbjct: 303 SEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPV 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPG 381
           DA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P    
Sbjct: 363 DAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPPLDED 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ K + 
Sbjct: 423 SMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI-KDDQ 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPGFM 498
            R  TVL+V  + +     LL  F+P  A K+++ L           L +     KPGF 
Sbjct: 482 ARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDKPGFT 541


>gi|221639859|ref|YP_002526121.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782870|sp|B9KKH3|SYM_RHOSK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221160640|gb|ACM01620.1| Methionyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 572

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/555 (20%), Positives = 232/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +     +++A    +S+D F R++  R+H   +     +++ G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
             ++S+ D  +  D          G D    +   N                       +
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +             + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+  E +  +++   + L      M+   + +A A++ +L    + Y  +  PW + 
Sbjct: 422 PAGGSPGEREHQLVAELQQQLAAYETCMEAMEVRKAAAELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ--SLDQRLKP 495
           KT+P++A  ++ + + +IR  A++ + F+P  A  +   L   D +         + L P
Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCEDWSWPADVGRALEVLPP 541

Query: 496 GFMLHKTFDPIFPRF 510
           G     T + +F + 
Sbjct: 542 GHGFT-TPEVLFRKI 555


>gi|83941176|ref|ZP_00953638.1| methionyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846996|gb|EAP84871.1| methionyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 570

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/553 (20%), Positives = 224/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGQEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A+   +S+D F R++  ++    +     + D+G I +   
Sbjct: 63  AGKPVAEYCAEMHEVQARIAEGFGLSFDHFGRSSSAQNKALTQHFAAALYDQGLIEEVEQ 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP---------------VQ 158
              YS  D  +  D  V            +G        Q +P               ++
Sbjct: 123 RQIYSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F R S  +DKL  +  S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 MRATKHLFLRQSQMKDKLNEWINSKADWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+       +         +W  D          
Sbjct: 242 PVKRGDADWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIMGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P 
Sbjct: 362 LSADYWRWWLLSHAPETSDAEFTWENFQSSVNKDLADVLGNFISRITKFCRSKFSEDVPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G +   + ++++  +  +   +  M+   + ++ A++ ++ +  + Y  AQ PW   KT
Sbjct: 422 AGEYGPEEHALIADLTERVARYQTAMEAMEVRKSAAELRAIWAAGNEYLQAQAPWTTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +PD+A+  + + + +I   A+L   F+P  A  + D + V +        +   +L PG 
Sbjct: 482 DPDKAAAQVRLALNLIPLYAVLSAPFIPTAAASMLDSMKVENAAWPDDVPAALAQLAPGH 541

Query: 498 MLHKTFDPIFPRF 510
              +  + +F + 
Sbjct: 542 AF-EVPEVLFAKI 553


>gi|187476981|ref|YP_785005.1| methionyl-tRNA synthetase [Bordetella avium 197N]
 gi|123752268|sp|Q2KYS4|SYM_BORA1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115421567|emb|CAJ48077.1| methionyl-tRNA synthetase [Bordetella avium 197N]
          Length = 691

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 128/554 (23%), Positives = 233/554 (42%), Gaps = 57/554 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             L+++TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   A+ 
Sbjct: 3   RTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHFVGADDAHGAPIMLKAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       D   I +D +  T    +      +++ +   G I     
Sbjct: 63  EGITPQALVARYAAERPRYLDGFHIRFDHWHSTDSAENVALSHEIYRALKAAGLIETRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G   +   A + P + ++            
Sbjct: 123 EQFFDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVYAPTELIQPYSALTGATPVL 182

Query: 163 ---EGYFFRLSA-----YQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSL 209
              + +FF+LS      +  +  +    +    L  E + +   +      ++ L D  +
Sbjct: 183 KRSDHFFFKLSDPRCVEFLQQWTTGSNRNGIKHLQSEVQAKTREWLGGEEGEAKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVI 263
           SR    +GI+IPD P    YVW+DA   YL +     +  G               +H I
Sbjct: 243 SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCDKIGLDFDALLDPSSATEQVHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGV 322
           GKDI+ FHA++WPA L  A    P  +  HGFI   GEK+SKS G  I P+  +   +  
Sbjct: 303 GKDIIYFHALFWPAMLKFAGRKTPDALNVHGFITVSGEKMSKSRGTGISPLRYLEVGMDP 362

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRY++  +  A  +D  ++ +    RVN+DL     N+ SR+ + I + ++G +   G
Sbjct: 363 EWLRYYMAAKLNARVEDMDFNPEDFIARVNSDLVGKYVNIASRAANFITRHFEGKLAYLG 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-- 439
                  ++ +  ++  + IR  ++ +  +RA+ ++++    +++ FDA +PW L K   
Sbjct: 423 DT----AALSAEFAQQTESIRAALEAREFNRAIREIMAYADGINQAFDAAQPWVLAKGFA 478

Query: 440 --NPDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF---QSLDQ 491
             +  R      +    +   + L+++L   +P L +++   LF A  +  +     L  
Sbjct: 479 EADEARRAQLQDICSRALAGFKALSVMLAPVLPALTSRVARDLFGAQRDFIWSDAADLPA 538

Query: 492 RLKPGFMLHKTFDP 505
           ++ P   L +  DP
Sbjct: 539 QVAPFKHLMQRVDP 552


>gi|289824250|ref|ZP_06543845.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 637

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/507 (23%), Positives = 225/507 (44%), Gaps = 48/507 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G +V F    D HG  I   AQ  G+T +  + + S+  +      +ISYD++  T  
Sbjct: 1   MRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
             + +   +++ ++ + G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCE 120

Query: 149 YYNAQHNPVQWMEE--------------EGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P + +E               E +FF L ++ + L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--- 251
           ++  + +SGL+   +SR    +G +IP+ P    YVW+DA   Y+ +   L +  G    
Sbjct: 178 KMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTS 237

Query: 252 KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             ++W  D      H IGKDI+ FH+++WPA L  ++   P  +F HG++   G K+SKS
Sbjct: 238 FDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKS 297

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            G  I     ++    D+LRY+   +++    D   + +   +RVNAD+ N + NL SR+
Sbjct: 298 RGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN 357

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I K +DG++    A   +D  +    +     I E  +++   +A+ ++++L    +
Sbjct: 358 AGFINKRFDGVL----AAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVAN 413

Query: 426 RYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           RY D Q PW + K          +  + + + R L   L+  +P L+ ++   L      
Sbjct: 414 RYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERVEAFLN---SE 470

Query: 484 RCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + +++Q L     ++ TF  ++ R 
Sbjct: 471 LNWDAIEQPLLS-HKVN-TFKALYNRI 495


>gi|161485986|ref|NP_737577.2| methionyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507069|ref|ZP_05749969.1| methionine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259165347|gb|EEW49901.1| methionine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 610

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 149/525 (28%), Positives = 225/525 (42%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 63  KEGVSVQELADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLHDNGYMIKET 122

Query: 124 YSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEGYF 166
             G  S        D             GA G   +            NPV  +  E   
Sbjct: 123 TLGAISPSTGRTLPDRYIEGTCPICHADGARGDQCDNCGNQLDPADLINPVSKINGETPE 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L          L   R +   + +K  L  L   R        DWGI IP
Sbjct: 183 FVETEHFLLDLPALADSLTAWL-KGREDWRPNVLKFSLNLLEDIRPRAMTRDIDWGIPIP 241

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWP----ADLHVIGKDILR 269
            +         +YVW DA+  Y        +      +   FW     +  + +GKD + 
Sbjct: 242 VEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRTFWNDPETSSYYFMGKDNIT 301

Query: 270 FHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL                 L LP +V S  F+   G K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYAGRGSRGGEVGDLGELNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++  
Sbjct: 362 FLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A T+SD+ IL + +        +++      A+ Q++ +V E + Y   Q+PW+
Sbjct: 421 EVPVPSALTDSDQRILDLAASTFDSAGADLELSKFKNAITQIMHVVGEANAYIAEQEPWK 480

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+     +L  ++P  A K+ + L 
Sbjct: 481 LAKDETQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLG 525


>gi|83952859|ref|ZP_00961589.1| methionyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83835994|gb|EAP75293.1| methionyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 570

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 111/553 (20%), Positives = 224/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLFARYLRGRGQEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +      ++A    +S+D F R++  ++H   +    ++++ G I +   
Sbjct: 63  AGKPVEQYCAEMHDIQAEIAKGFRLSFDHFGRSSSPQNHRLTQHFAGRLAEAGLIEEVSE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D          G D    +   N                       +
Sbjct: 123 KQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAVSGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E    + R S+ +D+L ++ ++  ++ +              GL+D  ++R   DWG+
Sbjct: 183 VRETRHLYLRQSSMRDELNAWIDAKKDWPILTTSIARKWLNDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDDP-------QYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+  +    +        ++W  D          
Sbjct: 242 PVKKGEADWPGMEGKVFYVWFDAPIEYIACSQEWVDAGKGDDWERWWRTDKGAEDVTYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + ++ 
Sbjct: 302 FMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQALDI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEEVPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            GAF   + +++   +  ++    +M+   + ++  ++ ++    + Y  +  PW   K 
Sbjct: 422 GGAFGAEETALIETLTTRIRAYEGHMEAMEVRKSANELRAIWVAGNEYLQSAAPWATFKD 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ--SLDQRLKPGF 497
           +P++A+  + + + +IR  A+L   F+P  +  +   +   D+       +  + L PG 
Sbjct: 482 DPEKAAAQVRLALNLIRLYAVLSAPFIPDASAAMLKSMQTEDDQWPEDVGAALETLAPGH 541

Query: 498 MLHKTFDPIFPRF 510
                 D +F + 
Sbjct: 542 GFT-VPDVLFAKI 553


>gi|213966064|ref|ZP_03394252.1| methionyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951262|gb|EEB62656.1| methionyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 608

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 158/594 (26%), Positives = 247/594 (41%), Gaps = 92/594 (15%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +++ + A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A+ 
Sbjct: 3   RIFTAVAWPYANGPRHIGHVAGFGVPSDVFARYQRMVGNDVLMVSGTDEHGTPLLVQAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D+ +R        L +SYD F RTT + H+   + L++ + + G + K   
Sbjct: 63  EGVSVQELADRYNRQIVKDLAGLGLSYDLFTRTTTRNHYVVVQELFRGLYENGYMVKQTT 122

Query: 125 SGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHN---------PVQWMEEEGYFF 167
            G  S        D  +          GA G   +   N         PV  +  E   F
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPADLIDPVSKINGETPKF 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIPD 222
             + +    L          L   R++   + +K  L  L   R        DWG+ IP 
Sbjct: 183 VETEHFLLDLPALAEALTEWLQE-RKDWRPNVLKFSLNILKDIRPRAMSRDIDWGVPIPL 241

Query: 223 DPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
           +         +YVW DA+  YL+ +        D    + W  D      + +GKD + F
Sbjct: 242 EGWSENGTKKLYVWFDAVVGYLSASIEWAWRIGDPEAWRKWWNDPEALSYYFMGKDNITF 301

Query: 271 HAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WPA LL                 L LP +V S  ++   G K S S G VI   + 
Sbjct: 302 HSQIWPAELLGYRGEGSRGGEVGQLGELNLPTEVVSSEYLTMSGSKFSSSKGVVIYVKDF 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + E G D LRYF+       +D  +  D   +RVN +LAN  GNLV+R+VSM  K++   
Sbjct: 362 LAEFGPDPLRYFIAMAGPENQDTDFTWDEFVRRVNNELANSWGNLVNRTVSMAFKNFG-E 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +PTPG  T++D  +L +  R   E+ + +        +   + LV E + Y  AQ+PW+L
Sbjct: 421 VPTPGELTDADRELLDLAERSFAEVGDALALSRFRAGITAAMHLVGEANAYIAAQEPWKL 480

Query: 437 KKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---------------- 478
            K     +R +TVL+  ++V+    +LL  ++P+ A K+F+ L                 
Sbjct: 481 AKDESQRERLATVLWTALQVVSDANVLLTPYLPESAQKVFETLGGEGIWAAMPEVQEVQD 540

Query: 479 ----------VADENRCFQSLDQ------------RLKPGFMLHKTFDPIFPRF 510
                     +  E R +  +               ++PG  L K   PIF + 
Sbjct: 541 DMPVEPVGADLPAEGRSYPIITGDYVNQKAAWRRFDIEPGTALAKP-KPIFTKL 593


>gi|68566009|sp|Q8FR00|SYM_COREF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23492805|dbj|BAC17777.1| putative methionyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
          Length = 613

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 149/525 (28%), Positives = 225/525 (42%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + +S A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 6   KNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNNVLMVSGTDEHGTPLLVQAD 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT   H+   + L++ + D G + K  
Sbjct: 66  KEGVSVQELADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLHDNGYMIKET 125

Query: 124 YSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEGYF 166
             G  S        D             GA G   +            NPV  +  E   
Sbjct: 126 TLGAISPSTGRTLPDRYIEGTCPICHADGARGDQCDNCGNQLDPADLINPVSKINGETPE 185

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L          L   R +   + +K  L  L   R        DWGI IP
Sbjct: 186 FVETEHFLLDLPALADSLTAWL-KGREDWRPNVLKFSLNLLEDIRPRAMTRDIDWGIPIP 244

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWP----ADLHVIGKDILR 269
            +         +YVW DA+  Y        +      +   FW     +  + +GKD + 
Sbjct: 245 VEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRTFWNDPETSSYYFMGKDNIT 304

Query: 270 FHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL                 L LP +V S  F+   G K S S G VI   +
Sbjct: 305 FHSQIWPAELLGYAGRGSRGGEVGDLGELNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKD 364

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++  
Sbjct: 365 FLAEFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFG- 423

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A T+SD+ IL + +        +++      A+ Q++ +V E + Y   Q+PW+
Sbjct: 424 EVPVPSALTDSDQRILDLAASTFDSAGADLELSKFKNAITQIMHVVGEANAYIAEQEPWK 483

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+     +L  ++P  A K+ + L 
Sbjct: 484 LAKDETQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLG 528


>gi|260948086|ref|XP_002618340.1| hypothetical protein CLUG_01799 [Clavispora lusitaniae ATCC 42720]
 gi|238848212|gb|EEQ37676.1| hypothetical protein CLUG_01799 [Clavispora lusitaniae ATCC 42720]
          Length = 746

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 113/548 (20%), Positives = 214/548 (39%), Gaps = 45/548 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      A 
Sbjct: 185 RNILITSALPYVNNVPHLGNIVGSVLSADIYARYAKNRNYNALFVCGTDEYGTATETKAL 244

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              VT +   D+  +  +D+ D  DI++D F RTT     +  + ++ K+     + +  
Sbjct: 245 EEHVTPQELCDKYHKVHKDVYDWFDINFDYFGRTTTPLQTEIAQDIFMKLYHNNYLEEQT 304

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
               Y     ++  D  V            +G          NP + +E           
Sbjct: 305 TEQLYCEVHHSFLADRFVEGTCPKCAYEDARGDQCDKCGNLLNPFELIEPRCKLDNSKPV 364

Query: 167 FRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            R S +    L+  E   +                +    S++K GL    ++R    WG
Sbjct: 365 PRNSTHVYLKLNELEPELKEWVEEAAEKGAWSKNSKTITNSWLKQGLDPRCITRD-LVWG 423

Query: 218 IKIPDD--PQYIMYVWIDALTNY-----LTTTGYLDNPDGSKAKFWPADL---HVIGKDI 267
             +P +     ++YVW DA   Y                  +    P ++     +GKD 
Sbjct: 424 TPVPLEKFKDKVLYVWFDATIGYVSITANYFKDKEIKDGWQQWWRNPENVNLYQFMGKDN 483

Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FH + +PA  +       K   + +  ++ ++  K SKS G  +      E  +    
Sbjct: 484 VPFHTVVFPATQIGTRDKWTKLHHLNTTEYLQYEDGKFSKSRGVGVFGNNARETGISPSV 543

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            RY+L        D  +       R N++L   +GN V+R V   +  Y+G++P+  A  
Sbjct: 544 WRYYLASVRPETSDSHFSWKEFVTRNNSELLANLGNFVNRLVKFAIAKYNGVVPSYDANK 603

Query: 385 ESDES-ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
            ++ +      + +L    ENM+   + R L   +++ S  +++    K    L    PD
Sbjct: 604 IANYASFEKDVNDLLTSYIENMEAVNLRRGLEIAMAISSRGNQFLQDNKLDNSLFNNTPD 663

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
            +  V+ V + +I  ++ ++  F+P   ++I ++L     +      +  L+PG  L K 
Sbjct: 664 VSDAVVGVGLNLIYLVSAVISPFMPATRDQICEMLNAPALSIT-DKFEFVLEPGHNLGKA 722

Query: 503 FDPIFPRF 510
              +F R 
Sbjct: 723 -QYLFKRI 729


>gi|320459453|dbj|BAJ70074.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 616

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 139/540 (25%), Positives = 228/540 (42%), Gaps = 53/540 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+T 
Sbjct: 3   VAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTA 62

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG       
Sbjct: 63  QELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGSQQVAIS 122

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAY 172
                      +  E      E  +G        +       NPV  +  E   F  + +
Sbjct: 123 PSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEH 182

Query: 173 QDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP-----DD 223
               L       +  L   +     +     GL      R   +  DWGI +P     D+
Sbjct: 183 YFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKGWIDN 242

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+  WP
Sbjct: 243 PNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPKCPAYYFMGKDNITFHSQIWP 302

Query: 277 AFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           + +L+ N              L LP++V +  F+  +G+K S S G VI   +++    V
Sbjct: 303 SEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPV 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPG 381
           DA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P    
Sbjct: 363 DAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPPLDED 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ K + 
Sbjct: 423 SMTNEDRGLLEEASAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI-KDDQ 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPGFM 498
            R  TVL+V  + +     LL  F+P  A K+++ L           L +     KPGF 
Sbjct: 482 ARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDKPGFT 541


>gi|311114169|ref|YP_003985390.1| methionine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945663|gb|ADP38367.1| methionine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 623

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 146/589 (24%), Positives = 246/589 (41%), Gaps = 93/589 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 6   ILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 65

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   ++ +R        L +SYD F RTT   H    + ++++    G IYKG   
Sbjct: 66  GVSAQELANRYNRVITKDLCDLGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQK 125

Query: 126 GWYSLRDE-----AYYNDDEVYKGADGQYYNAQH------------NPV--------QWM 160
              S          Y        GADG   +               NPV        ++ 
Sbjct: 126 VAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPRFE 185

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E E YF  L A  D  LS+  S   +   +   +  +      +K  +++R   DWGI +
Sbjct: 186 ETEHYFLDLPALADANLSWLNSRDGWRTNVINFSIGLF---KEVKPRAITRD-IDWGIPV 241

Query: 221 P-----DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDIL 268
           P     D+P   +YVW DA+  YL+ +             + W  D      + +GKD +
Sbjct: 242 PVEGWVDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMGKDNI 301

Query: 269 RFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            FH+  WP+ +L+ N              L +P++V +  F+  +G+K S S G VI   
Sbjct: 302 TFHSQIWPSEMLAYNGAGSKGGEAGVYGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVK 361

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++    VDA+RY++        D  +      +  N +LA   GNLV+R  ++I K++ 
Sbjct: 362 DILARYPVDAVRYYISIAGPENSDADFTWAEFVRHNNEELAASWGNLVNRVANLIHKNFG 421

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            +      + T+ D ++L   S   + +   ++      AL + + +VS++++Y  A +P
Sbjct: 422 EIPALDENSMTDMDRALLDQTSNAFEIVGGLIERHHQKNALNEAMRVVSDINKYISATEP 481

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------------- 478
           W++ K +  R  TVL+V  + +     LL  F+P  A K+++ L                
Sbjct: 482 WKI-KDDEARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGVFSPLPRIEEVT 540

Query: 479 -----------------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                            + +    ++S  + L  G  + K   PIF + 
Sbjct: 541 DLDNPDFKYPIITGDYRLGETVHPWES--EELVTGTPVAKP-TPIFAKI 586


>gi|67521846|ref|XP_658984.1| hypothetical protein AN1380.2 [Aspergillus nidulans FGSC A4]
 gi|40746054|gb|EAA65210.1| hypothetical protein AN1380.2 [Aspergillus nidulans FGSC A4]
 gi|259488283|tpe|CBF87610.1| TPA: methionyl-tRNA synthetase (AFU_orthologue; AFUA_1G09010)
           [Aspergillus nidulans FGSC A4]
          Length = 658

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 117/553 (21%), Positives = 225/553 (40%), Gaps = 50/553 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGHPTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQKHTEISQAIFKRLYDNGYLA 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      Y     ++              Y  A G   +   + +   +           
Sbjct: 131 EKTAEQPYCETHGSFLADRYVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKLDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   RN   ++++ GLKD  ++R   
Sbjct: 191 TPVKRDTKHIHLLLDKLQPEIEKYVLPAMEKGEWPKNSRNITENWLREGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D     ++YVW +A   Y + T           +  P D+     +GKD + 
Sbjct: 250 KWGVPVPLDGFDNKVLYVWFEACIGYPSITANYTPDWELWWRN-PEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHSVIFPGCQLGTKEKWTMLHHLNTAEYLNYEGGKFSKSRGIGVFGNNAKETGVAPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L++      D  ++        N++L   +GNLV+R V ++   Y   IP      ES
Sbjct: 369 YYLLKNRPETGDTQFEWRSFVDSNNSELLAKLGNLVNRVVKLVAASYGSTIPD-FTVPES 427

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            +  L   + +L++  E M+   +   ++  + +    +    A +    L    P+RA+
Sbjct: 428 FQPTLDEVTGLLRQYVEEMEGVHLRAGVSTAMKIAEAGNGLIQANRLDNSLIANEPERAA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------VADENRCFQSLDQRLKPGF 497
            V+   + +I  LA +   ++P  +  I + L         + D    ++ +   LKPG 
Sbjct: 488 AVVGTVLNLIHLLASVFAPYLPATSKSINEQLNAQFALIPSLEDIKDGWKPVS--LKPGH 545

Query: 498 MLHKTFDPIFPRF 510
            + K    +F R 
Sbjct: 546 KIGKA-QYLFSRI 557


>gi|309812809|ref|ZP_07706547.1| methionine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308433226|gb|EFP57120.1| methionine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 635

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 149/566 (26%), Positives = 241/566 (42%), Gaps = 91/566 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A+ 
Sbjct: 3   KVLSAVAWPYANGPRHIGHVAGFGVPSDVYSRYMRMAGHDVLMVSGTDEHGTPIVIMAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG T + F D+N+    D    L +SYD F RTT   H++  + L+  + + G + +   
Sbjct: 63  AGKTPQEFADENASIIVDDLVGLGLSYDLFTRTTTANHYEVVQKLFLALHENGYMVEQTT 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------QW 159
           SG  S        D  +            +G        Q +P               ++
Sbjct: 123 SGAISPSTGRTLPDRYIEGTCPICKYAEARGDQCDNCGNQLDPTDLIDPRSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E + +F  L A  D L S+ +             +    +   ++  +++R   DWGI 
Sbjct: 183 IETQHFFLDLPALADALSSWLDGREATGTWRPNVIKFSQNILEEIRPRAMTRD-IDWGIP 241

Query: 220 IPDD-----PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFW---PADL--------- 260
           +P D     P   +YVW DA+  YL+ +        +  K + W   PA           
Sbjct: 242 VPLDGWREQPTKRLYVWFDAVVGYLSASIEWARRLGEPDKWREWWNAPASTGGDAELARA 301

Query: 261 -----------------------------HVIGKDILRFHAIYWPAFLLSAN-------- 283
                                        + +GKD + FH+  WPA LL+AN        
Sbjct: 302 ERATSDEGSVGAQKASEVLGNSDGVAVSKYFMGKDNIVFHSQIWPAELLAANGEGAKGGV 361

Query: 284 ------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 L LP +V S  F+  +G++ S S G+VI   +V+E  G D LRYF+V      +
Sbjct: 362 ESPFGHLNLPSEVVSSEFMTMEGKQFSTSRGHVIYVKDVLERYGPDPLRYFIVAAGPESQ 421

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +      +R N++L  G GNLV+R+ SMI K++   IP P    + D  +L      
Sbjct: 422 DADFTWAEFVQRNNSELVAGWGNLVNRAASMIHKNFG-EIPAPSELADVDREVLDAVRGG 480

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIR 456
              +   ++   +  AL + + LV EV+RY    +P++LK  +  +R +TVL+   + + 
Sbjct: 481 FATVGALIERNRLKAALTETMRLVGEVNRYVAVTEPFKLKGEDERERLATVLHTLAQCVV 540

Query: 457 QLAILLQAFVPKLANKIFDILFVADE 482
            L  ++  FVP  AN + +++    E
Sbjct: 541 DLNTMMAPFVPFSANLVHEVMGGEGE 566


>gi|270284514|ref|ZP_05966259.2| methionine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277051|gb|EFA22905.1| methionine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 620

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 134/534 (25%), Positives = 226/534 (42%), Gaps = 50/534 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + ++ A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   
Sbjct: 4   IMVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC-- 123
           GVT +   D+ +R   +    L +SYD F RTT K H    + L+++    G IYK    
Sbjct: 64  GVTAQELADRYNRVIVNDLCNLGLSYDLFTRTTTKNHEHVVQELFRQCLKNGYIYKDTQK 123

Query: 124 ---------------YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
                            G   +        D+     +    +   NPV  +  E   F+
Sbjct: 124 VAISPSTGRTLPDRYIEGECPICHTQGARGDQCDACGNELDPDELINPVSKINGETPIFQ 183

Query: 169 LSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIP--- 221
            S +    L   +  + +++         +     GL      R   +  DWGI IP   
Sbjct: 184 DSEHYFLDLPALKEANEQWLEGRTGWRTGVINFSRGLMKDVKPRAITRDIDWGIPIPVPG 243

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
             D+P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+
Sbjct: 244 WIDNPNKRLYVWFDAVIGYLSASIEWARRKGDPELWREWWNDPSTPGYYFLGKDNITFHS 303

Query: 273 IYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WP+ +L+                L +P++V +  F+  +G K S S G VI   +++ 
Sbjct: 304 QIWPSEILAYNGEGDKGGEPGELGKLNMPEQVVASEFMTMEGRKFSSSRGIVIYVKDILA 363

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +  VDA+RY++        D  +      +  N +LA   GNLV+R  +++ K++  +  
Sbjct: 364 KYPVDAVRYYISVAGPENSDSDFTWSEFVRHNNEELAASWGNLVNRVANLMHKNFGEVPA 423

Query: 379 T-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                 TE D+++L   +     +   +       AL + + LV ++++Y  A +PW++ 
Sbjct: 424 MFESEMTEQDQALLDEAADAFDTVGALLDQHHQKNALNEAMRLVGDINKYISATEPWKI- 482

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           K NP R  TVL+V  + +     LL  F+P  A  +++ L           +++
Sbjct: 483 KDNPKRLGTVLHVAAQAVSDANHLLAPFLPHSAQLVWEALGGKGTFSPMPRIEE 536


>gi|77463998|ref|YP_353502.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123757747|sp|Q3J0T3|SYM_RHOS4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77388416|gb|ABA79601.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 572

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 114/555 (20%), Positives = 231/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +     +++A    +S+D F R++  R+H   +     +++ G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
             ++S+ D  +  D          G D    +   N                       +
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +             + YVW DA   Y+  T    + +G       ++W  D        
Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+  E +  +++   + L      M+   + +A +++ +L    + Y  +  PW + 
Sbjct: 422 PAGGSPGEREHQLVAELQQRLAAYEACMEAMEVRKAASELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ--SLDQRLKP 495
           KT+P++A  ++ + + +IR  A++ + F+P  A  +   L   D +         + L  
Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCEDWSWPADVGRALEVLPA 541

Query: 496 GFMLHKTFDPIFPRF 510
           G     T + +F + 
Sbjct: 542 GHGFT-TPEVLFRKI 555


>gi|260425221|ref|ZP_05779201.1| methionyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260423161|gb|EEX16411.1| methionyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 570

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 114/545 (20%), Positives = 220/545 (40%), Gaps = 49/545 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGNEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A+   +S+D F R++  ++H   +     ++++G I +   
Sbjct: 63  AGKPVAEYCAEMHEVQARIAEGFRLSFDHFGRSSSPQNHALTQHFAGVLAERGLIREVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  D  +  D  +            +G        Q +PV               +
Sbjct: 123 RQMYSPTDGRFLPDRYIEGTCPNCGFEDARGDQCDNCTKQLDPVDLINPRSVISGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  + ++  + +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 MRETKHLFLCQSQIRTEIEDWIDSKSDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+  +    +        ++W  D          
Sbjct: 242 PVKKGAEDWPGMEGKVFYVWFDAPIEYIACSQEWVDAGKGDDWERWWRTDKGAEDVTYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLTFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN  SR        +  ++P 
Sbjct: 362 LPADYWRWWLLSHAPESSDAEFTWENFQTSVNKDLADVLGNFASRVTKFCRSKFGEVVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +E +++  +  ++E  E+M +  + ++ A + +     + Y     PW   KT
Sbjct: 422 GGTPGAREEQLIADLTAKVREYEEHMAHAEVRKSAAALRAAWVLGNEYLQEAAPWSTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +P+ A+  + + + VIR  A++ Q F+P  + ++   L   D++      +    L  G 
Sbjct: 482 DPEAAAAQIRLALNVIRLYAVISQPFIPDASAQLLTALNTTDDSWPDDVAAALATLPAGH 541

Query: 498 MLHKT 502
                
Sbjct: 542 AFVVP 546


>gi|68536602|ref|YP_251307.1| methionyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123775680|sp|Q4JU18|SYM_CORJK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68264201|emb|CAI37689.1| metS [Corynebacterium jeikeium K411]
          Length = 612

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 152/596 (25%), Positives = 245/596 (41%), Gaps = 92/596 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  S A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A+
Sbjct: 3   KRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGNEVLMVSGTDEHGTPLLVQAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D+ +R   +    L +SYD F RTT + H+   + L+  + + G +    
Sbjct: 63  KEGTTVQELADRYNRIIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFTGLYNNGYMVTQT 122

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             G  S          Y        GA     +   N    ++ E      S    +   
Sbjct: 123 TRGAISPSTGRTLPDRYIEGTCPICGAKDARGDQCDNCGNQLDPEDLIDPRSKINGETPE 182

Query: 179 YYESHPEF-----------ILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIPD 222
           + ++                    R +   + +K  L  L   R        DWG+ IP 
Sbjct: 183 FIDTEHFMLDLPALAEALTTWLKGRTDWRPNVLKFSLNLLEDIRPRAMSRDIDWGVPIPV 242

Query: 223 DPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
           +         +YVW DA+  YL+ +        D    + W  D      + +GKD + F
Sbjct: 243 EGWQDNNAKKLYVWFDAVVGYLSASIEWAWRIGDPDAWRKWWNDPEALSYYFMGKDNITF 302

Query: 271 HAIYWPAFLLSAN----------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           H+  WPA LL                   L LP +V S  F+   G K S S G VI   
Sbjct: 303 HSQIWPAELLGYGGQGSKGGEAGDLADPALNLPTEVVSSEFLTMSGSKFSSSKGVVIYVR 362

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + ++E G DALRYF+        D  +  D   +R+N++LAN  GNLV+R+VSM  K++ 
Sbjct: 363 DFLKEFGPDALRYFIATAGPETTDTDFTWDEFVRRINSELANEWGNLVNRTVSMAYKNFG 422

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             +PTPG  T  DE++L+  ++    + +N+        + + + +    ++Y  A +PW
Sbjct: 423 -EVPTPGPLTAEDEALLAESAKAFDVVGDNINLSRFKAGITEAMRIAGRANQYIAAMEPW 481

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-------------- 478
           +L K     +R +TVLY  ++V+  +  LL  ++P  A KIF+ L               
Sbjct: 482 KLAKDENQRERLATVLYTALQVVSDVNTLLTPYLPFSAQKIFETLGGEGIWAAQPEVVEV 541

Query: 479 ------------VADENRCFQSLD------------QRLKPGFMLHKTFDPIFPRF 510
                       + +E R +  +             Q ++PG  L K   P+FP+ 
Sbjct: 542 TDESPREPVGVGLPEEGRTYPVIMGDYTKQKVTWARQEIQPGTQLSKP-KPLFPKL 596


>gi|282163406|ref|YP_003355791.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155720|dbj|BAI60808.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 669

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 123/538 (22%), Positives = 203/538 (37%), Gaps = 44/538 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + ++  + Y N   HIGH    I AD+  R  R+ G +  F  G+D HG  I   A+ 
Sbjct: 8   RPVLVTCGLPYANGAAHIGHLRTYIPADMFVRTLRMMGQNTTFVCGSDTHGTPIVVNAEE 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T    V +    F       +I ++ +  T +  +H+  R + + +   G +Y    
Sbjct: 68  QGTTPGELVKKYHLVFEQTFKNFEIDFNHYGSTDDLENHERTRSIVRDLEKNGYVYPKEI 127

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNPVQW 159
              Y    +    D  V                                         + 
Sbjct: 128 KVAYCGHCQRGLPDRYVEGTCPYCGALARGDECDIGCQKHLEPGDILDPRCRICGGKAET 187

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             +E +FF+LS +   L  Y        L               LKD  ++R   +WG+K
Sbjct: 188 RVKEHFFFKLSEFGPFLTDYLNK-----LHATSNVNYAKEWAKDLKDWCITR-NLEWGVK 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-WPAD---LHVIGKDILRFHAIYW 275
            P     ++YVW+DA   Y+  T    +  G   K  W  D   +H IG DI+  H I+W
Sbjct: 242 YPGHEDLVVYVWVDAPIGYIAFTEEYMSSIGEDWKNIWKGDSRIIHFIGGDIIYHHCIFW 301

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE--VIEEVGVDALRYFLVREI 333
           PA L  A   LP  V + G I    +K SKS G ++   +  +      D LRY+++   
Sbjct: 302 PAMLKGAGYTLPWGVVASGMIKVNDKKFSKSRGYIVWVEDDYLAHGFHPDLLRYYILSYT 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  KD  +     + +VN +L    GN V+R ++ I               E D S+   
Sbjct: 362 SHTKDINFSWKEFQTKVNKELVGSFGNFVNRVLTFI------ESKGLDVKGEIDPSVSEA 415

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               +   +  ++N    +    +I+L    + YF   +PW+L K +      VLY   +
Sbjct: 416 IKTAMSVAKAEIENYEFKKICDSIITLADFGNTYFQGHEPWKLIKEDKAACENVLYNCTQ 475

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF-MLHKTFDPIFPRF 510
           +++ LAIL    +P  A +I+ +L     +     L+  L P   M       +F + 
Sbjct: 476 IVKALAILSWPSIPAKAEEIWGMLGYDKASLSKVPLEDALLPYVSMDRPKPTILFSKL 533


>gi|71892244|ref|YP_277978.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123747817|sp|Q492J8|SYM_BLOPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71796350|gb|AAZ41101.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 555

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 139/538 (25%), Positives = 224/538 (41%), Gaps = 41/538 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+ G  V F    D HG  I   +Q 
Sbjct: 4   KKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLKSQQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  +  + Q  +  +       ISYD++  T      +    ++ +++ +G I     
Sbjct: 64  LNIAPEQMIAQIRQEHQRDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKSKFI 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----------------NPVQWMEEEGYFF 167
           S  Y  +   +  D  V         + Q+                 NP   +       
Sbjct: 124 SQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAACGTIYTSLELINPKSVISGTSPII 183

Query: 168 RLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R S +    L  +            +  E  N+V  + K GLK   +SR    +G KIP+
Sbjct: 184 RKSEHLFFDLPAFTDTLRTWIRSGSIQKEVANKVEEWFKLGLKKWDISRDAPYFGFKIPN 243

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
             +   YVW+DA   Y+ T   L   N + S   FW ++      H IGKDI+ FH ++W
Sbjct: 244 SSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHCLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L  +    P  +F HG +   G KISKS G  I+    +  +  D LRY+   +++ 
Sbjct: 304 PAVLSGSQFRKPTNIFVHGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATKLSS 363

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      RVN+D+ N I NL SR+   I + Y+G +      T +   I ++ 
Sbjct: 364 HANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQYYNGHLSN----TLTHPLIYNMF 419

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTV 452
                 I +  Q +  + A+ +++ L  E +RY D   PW + K       A ++  + +
Sbjct: 420 IESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYSMGI 479

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++ R L I L+  +PKLAN     L        + SL   L     ++K F  IF R 
Sbjct: 480 QLFRVLMIYLKPVLPKLANYSECFLNT---RLTWGSLSAPL-SNHRINK-FKIIFSRI 532


>gi|38233469|ref|NP_939236.1| methionyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|68565986|sp|Q6NIA5|SYM_CORDI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|38199729|emb|CAE49389.1| methionyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 610

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 151/524 (28%), Positives = 231/524 (44%), Gaps = 53/524 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +S A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 4   RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGAEVLMVSGTDEHGTPLLVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+ +R   +    L +SYD F RTT + H+   + L+K + + G + K   
Sbjct: 64  EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAVVQDLFKGLYENGYMIKETT 123

Query: 125 SGWYSLRDEAYYNDDEVY--------KGADGQYYNAQ---------HNPVQWMEEEGYFF 167
            G  S        D  +          GA G   +            NPV  +  E   F
Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPADLINPVSKINGETPKF 183

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIPD 222
             + +    L          L  +R++   + +K  L  L   R        DWGI IP 
Sbjct: 184 IETEHFLLDLPALADALAAWL-KDRKDWRPNVLKFSLNLLEDLRPRAMSRDIDWGIPIPV 242

Query: 223 DPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
           +         +YVW DA+  YL+ +        D    K W  D      + +GKD + F
Sbjct: 243 EGWQDNGAKKLYVWFDAVVGYLSASIEWAYRTGDPEAWKKWWNDPESSGYYFMGKDNITF 302

Query: 271 HAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WPA                    L LP +V S  F+   G K S S G VI   + 
Sbjct: 303 HSQIWPAELLGYQGKGAKAGSVHSLGELNLPTEVVSSEFLTMSGSKFSSSKGIVIYVKDF 362

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++   
Sbjct: 363 LKEFGADPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAYKNFG-E 421

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +PTPG  TESD+ IL+        + E + +    + +   + +V E + Y   Q+PW+L
Sbjct: 422 VPTPGELTESDKKILAQAEEAFGVVGEALAHSRFKQGITHAMHIVGEANAYIAEQEPWKL 481

Query: 437 KKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K     +R +TVL+  ++V+    +LL  ++P +A ++ + L 
Sbjct: 482 AKDESQRERLATVLWTALQVVSDCNVLLTPYLPHIAQQVHETLG 525


>gi|30962531|dbj|BAC76732.1| methionyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
          Length = 500

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 174/495 (35%), Positives = 264/495 (53%), Gaps = 20/495 (4%)

Query: 20  PHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS 77
           PHIGHAY  ++ DV  R++RL   G    F+ GTDEHG KI +AA  A  T K F D+ S
Sbjct: 2   PHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQAALAAKSTPKQFCDRVS 61

Query: 78  RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN 137
             F D+   L++S+ +FIRTT+  H +  +  W KI D G IYK  YSG+YS+ DE +  
Sbjct: 62  SKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSITDECFIP 121

Query: 138 DDEVYK-----GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           +++V K     GA+     +   PV+W+EEE Y FRLS +++K+  +       + P + 
Sbjct: 122 EEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKVAEWINRENIVVHPSKY 181

Query: 193 RNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           ++  ++ ++      +S SR    WGI +P+DP   +YVW+DAL NYLT TG+ +     
Sbjct: 182 KSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDALVNYLTVTGFPNAQSV- 240

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
               WP    VIGKDI +FH  YWPAFL++A L LP+KVF HG  L    K+SKSLGNV+
Sbjct: 241 ----WPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKVFIHGHWLIDNVKMSKSLGNVV 296

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMIL 370
           +P E I +   + LRYFL++      D  ++ +   + +N+DL N +GNL++R +V  I 
Sbjct: 297 NPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSCLQTINSDLVNNVGNLLNRSTVEKIN 356

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIREN----MQNQLIHRALAQVISLVSEVDR 426
           K+                        +++E REN           + +  ++  + E +R
Sbjct: 357 KEGMYPKMEIEDIEAEIRENAKKLMEMVEESRENCVDLYDEMSYFKIIENLMLTMKEANR 416

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            F + +PW+  + +  R  ++L+VT + IR + ILLQ   PK+A    + L V    R  
Sbjct: 417 LFQSSQPWK--EIDEKRLKSLLFVTYDTIRVVTILLQPITPKMAEFCLNRLGVPKNERNL 474

Query: 487 QSLDQRLKPGFMLHK 501
           ++       G  L  
Sbjct: 475 ENSRFGSYSGGKLGA 489


>gi|62185234|ref|YP_220019.1| methionyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|68565960|sp|Q5L5M3|SYM_CHLAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|62148301|emb|CAH64068.1| methionyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 551

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 138/520 (26%), Positives = 225/520 (43%), Gaps = 38/520 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +V+   +  +D  D L IS D F RTT   H    +  + ++  KG I     
Sbjct: 64  AGMGYQEYVNMYHKIHKDTFDKLGISIDFFSRTTNPFHKKLVQDFYTELQSKGLIENQIS 123

Query: 125 SGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--- 173
              YS  +  +  D  V        + GA G          +  +      +LS  Q   
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVHPRSKLSGSQLVL 183

Query: 174 -----------DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                        +           LP   R  V  ++K  L+  +++R    WGI +PD
Sbjct: 184 KETEHAFLHLERMVEPLLAYIDTCYLPEHIRKFVTDYIK-NLRPRAITRD-LSWGIPVPD 241

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPAD----LHVIGKDILRFHAIYW 275
            P  + YVW DA   Y++ T       N   +   FW  D    +  IGKD + FHA  +
Sbjct: 242 FPNKVFYVWFDAPIGYISGTMDWAASLNTPEAWKDFWLEDSTEYVQFIGKDNIPFHAAIF 301

Query: 276 PAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA  L  ++P  K   + S  F L +G + SKS GN ID    ++   +D LRY L    
Sbjct: 302 PAMELGQSIPYKKMDALVSSEFYLLEGCQFSKSEGNYIDIDTFLDTYSLDKLRYVLAATA 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILS 392
               D  +     K R N++L    GN + R +    K+ +  +  +     + D+  L 
Sbjct: 362 PETSDSEFTFMDFKTRCNSELVGKFGNFIHRVLVFAEKNGFKELAYSANLLEDQDKQFLD 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVT 451
              +++++ +E+     + +A   ++ L +  + YF+ Q PW+L K     R   VL+  
Sbjct: 422 RAQQIVRDAQEHYSQYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGLSHRVEAVLFCA 481

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
               + LA++    +P  A +I+ +L  + ++    SLD+
Sbjct: 482 CYCQKLLALISYPIIPGTAWEIWRML--SPKSLQLDSLDK 519


>gi|145591530|ref|YP_001153532.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|187647757|sp|A4WKG3|SYM_PYRAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145283298|gb|ABP50880.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 570

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 124/540 (22%), Positives = 229/540 (42%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  + +A  Y    PH+G+    ++ ADV AR+ RL G +V+F +G+D HG  I   A  
Sbjct: 3   KYVVGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHEVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +  +   ++    DIS+D +  T  + H    +  + ++ + G I+    
Sbjct: 63  LGVDPADYALKMHQIVAELFRRWDISFDLYTHTHSETHIKFVQEFFARVYENGFIFTRDD 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  RD+ Y  D  V            +G   +      +P Q +E            
Sbjct: 123 EVPYCPRDKIYLPDRFVIGKCPYCGYERARGDQCENCGRLLDPKQLIEPRCAVCGSKPEW 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-- 219
                +Y                   LP+  +   ++ +K G++  +++R    WGI   
Sbjct: 183 RVTRHWYLDLRRLEDRIRKYVEGNPHLPLNAKEMSLAMLKEGMRPRAITRDN-KWGIPAP 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
            P      +YVW +A+  Y++             + K +  D     +  +GKD + FH 
Sbjct: 242 FPGAEGKTIYVWFEAVLGYISAVVEYFKKLGREEEWKRFWLDQETKVVFFVGKDNVPFHV 301

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I  PA L+++  N  +P    S  ++L++G+K SKS    I   E +  +  D  R+ LV
Sbjct: 302 IILPALLMASGENYVMPTTTASTEYLLYEGDKFSKSRRWGIWIDEALHLLPTDYWRFVLV 361

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +      + +N  L + +GN  +R +S I     G +P PG  +  DE  
Sbjct: 362 YIRPENRDTSFTWQTALEVINKVLNDDVGNYANRVLSFIKSRMGGAVPPPGKPSPEDEEF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +S  +++ Q+   +     +  A+  V+ +  E ++Y +A+ PWEL K + + A+ VLY 
Sbjct: 422 ISKVAQLFQKAEAHYDAIELKEAVHTVVEIAREGNKYLNARAPWELAKKDAEAANAVLYR 481

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++ LA  L   VP+ A  ++ ++ ++     ++   +   PG  L +   P+F + 
Sbjct: 482 AFWSLKYLAAGLAPVVPRSAETLWAMMGIS-TPLTWEEAKKPPTPGAQLGE-VKPLFRKI 539


>gi|300858095|ref|YP_003783078.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685549|gb|ADK28471.1| Methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302330378|gb|ADL20572.1| methionyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 610

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 151/527 (28%), Positives = 238/527 (45%), Gaps = 59/527 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ +S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A  
Sbjct: 4   RVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMAGADVLMVSGTDEHGTPLLVQADK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ K   D+ +R   +    L +SYD F RTT + H+   + L+K + + G + K   
Sbjct: 64  EGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYSVVQELFKGLYENGYMIKETT 123

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PV--------QW 159
            G  S          Y        GADG   +   N            PV        Q+
Sbjct: 124 MGAVSPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGGTPQF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E E +   L A  D L  + +   ++   + + +  +      L+  ++SR   DWGI 
Sbjct: 184 IETEHFLLDLPALADALADWLKERQDWRPNVLKFSLNLL---EDLRPRAMSRD-IDWGIP 239

Query: 220 IPDDPQ-----YIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDI 267
           IP +         +YVW DA+  YL+ +             K W  D      + +GKD 
Sbjct: 240 IPVEGWEDNGAKKLYVWFDAVVGYLSASIEWAYRIGKPDAWKEWWTDPAASSYYFMGKDN 299

Query: 268 LRFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WPA                    L LP +V S  F+   G K S S G VI  
Sbjct: 300 ITFHSQIWPAELLGYQGKGARAGKLHTFGELNLPTEVVSSEFLTMSGSKFSSSKGIVIYV 359

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            + + E G D LRYF+        D  +  D   +RVN +LANG GNLV+R+VSM  K++
Sbjct: 360 KDFLREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAYKNF 419

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
              +PTPG  TESD+ IL + +   + + + + +    + +   + +V E + Y   Q+P
Sbjct: 420 G-EVPTPGELTESDQRILKLSAEAFEVVGDALAHSRFKQGITHAMHVVGEANAYIAEQEP 478

Query: 434 WELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+L K     +R +TVL+  ++V+    +LL  ++P ++ ++ + L 
Sbjct: 479 WKLAKDETQRERLATVLWTALQVVSDCNVLLTPYLPHISQQVHETLG 525


>gi|149200861|ref|ZP_01877836.1| methionyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145194|gb|EDM33220.1| methionyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 572

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 125/555 (22%), Positives = 230/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLFARYCRARGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++  ++    +   K++ DKG I +   
Sbjct: 63  AGQPVADYCAEMHAVQAEIARGFRLSFDHFGRSSSSQNRRLTQNFAKRLHDKGLIREVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
           +  YS  D  Y  D  +            +G        Q +PV               +
Sbjct: 123 TQMYSPTDGRYLPDRYIEGTCPNCGYESARGDQCDNCTKQLDPVDLINPRSAVSGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 MRETKHLYLRQSQMKDELEAWIDSKTDWPILTTSIAKKWLNDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDP-------QYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD-------- 259
            +  D          + YVW DA   Y+          G       ++W  D        
Sbjct: 242 PVQFDDAPWQGMDGKVFYVWFDAPIEYIACGAEWAEAHGLEASAWERWWRTDKGADDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 TQFMGKDNVPFHTLSFPATILGSAEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +  ++
Sbjct: 362 EILPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEVV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           PT GA+   + +++   +  ++E   +MQ   + ++ + + ++  E + Y     PW   
Sbjct: 422 PTGGAYGAQETALIERLTTRIREYEAHMQAMEVRKSASALRAIWVEGNEYLQEAAPWSTF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           K +P+RA+    + + +IR  A+L   F+P  A  +   +   D+N      +  + L  
Sbjct: 482 KADPERAAMQTRLALNLIRLYAVLSAPFIPDAAAAMLTAMQTDDDNWPDDVPAALEMLGA 541

Query: 496 GFMLHKTFDPIFPRF 510
                 T D +F + 
Sbjct: 542 NHAFT-TPDVLFSKI 555


>gi|118386032|ref|XP_001026138.1| methionyl-tRNA synthetase [Tetrahymena thermophila]
 gi|89307905|gb|EAS05893.1| methionyl-tRNA synthetase [Tetrahymena thermophila SB210]
          Length = 837

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 119/560 (21%), Positives = 216/560 (38%), Gaps = 52/560 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ Y N  PH+G     ++  DV AR+ R  G + ++  GTDE+G    
Sbjct: 262 VDGQRNILITSALPYVNNAPHLGTLIGCVLSGDVFARYCRSRGYNTIYICGTDEYGTATE 321

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T      +  +  +D+ D  DI +D F RTT ++H    + ++  +   G I
Sbjct: 322 MKALQEKTTPAEICTKYYKIQKDVYDWFDIDFDIFGRTTTEKHTKISQDIFLTLHKNGYI 381

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFR 168
            +      +    + +  D  V             G          NP + +  +    +
Sbjct: 382 KEDIMHQSFCAACDKFLADRYVNGTCPFCQHDDCHGDQCDKCGKLVNPAELINPKCTICK 441

Query: 169 LSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             +   +    +               +   E            +++K+GLK   ++R  
Sbjct: 442 NPSVIKETKHCFLDLPQLEKEIDEFIEKRSKEGDWSDNAYKTSKAWIKNGLKYRCITRD- 500

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  I +      +MYVW DA   Y + T  L        K  P ++     IGKD +
Sbjct: 501 LKWGTPIPLAGWENKVMYVWFDAPIGYPSITANLVEDWEKWWKN-PENVKLYQFIGKDNI 559

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P  LL           + S  ++ ++  K SKS    +   +  +  + V+  
Sbjct: 560 PFHCVIFPGTLLGTRENWTLLNSMSSCEYLQYESGKFSKSKCVGVFGDDAQKTGIPVEVW 619

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AF 383
           RY+L+       D  +       + N +L   +GNLV R +  +    +  +PT      
Sbjct: 620 RYYLLINRPEQNDTNFQWSDFAAKNNNELLPNVGNLVQRILKFLYSKLEKKVPTLDFSLL 679

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D++ L+    + Q+   +M+   +  AL  V+ + SE + Y    +PW        R
Sbjct: 680 NEEDKNWLASIWNLFQQYLSHMEKVELKSALKVVMQISSEGNNYMQKNEPWNKANQETGR 739

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----VADENRCFQSLDQR------- 492
               L+V V +IR L+ L + F+P L+ KI  +L      A + +  + +  +       
Sbjct: 740 HIVSLFVLVNIIRFLSALFEPFMPTLSAKINFMLGYEARTAKDEKILEFISSQPDAISGL 799

Query: 493 --LKPGFMLHKTFDPIFPRF 510
             L PG  +     PIF + 
Sbjct: 800 LSLVPGGQILNEPIPIFRKL 819


>gi|29840409|ref|NP_829515.1| methionyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301687|sp|Q822N0|SYM_CHLCV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29834758|gb|AAP05393.1| methionyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 550

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 131/504 (25%), Positives = 211/504 (41%), Gaps = 33/504 (6%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  + +V    +  +D  D L IS D F RTT   H       + ++  KG +     
Sbjct: 64  VGLGYQEYVSMYHKVHKDTFDKLGISLDFFSRTTNPFHKAIVEDFYLELKSKGLVENQIS 123

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQH------------NPVQWMEEEGYFF 167
              YS  ++ +  D          G DG   +               NP   +       
Sbjct: 124 FQLYSEDEKRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLINPRSKLSGSQLVL 183

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS----FVKSGLKDLSLSRKTFDWGIKIPDD 223
           + + +    L          +      E I          L+  +++R    WGI +PD 
Sbjct: 184 KETEHAYFHLERMVEPLLAFIEKAYLPEHIRKFVVDYIKNLRPRAITRD-LSWGIPVPDF 242

Query: 224 PQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFW----PADLHVIGKDILRFHAIYWP 276
           P  + YVW DA   Y++ T       N       FW       +  IGKD + FHA  +P
Sbjct: 243 PNKVFYVWFDAPIGYISATMDWAASVNTPDLWKDFWLEESTEYVQFIGKDNIPFHAAIFP 302

Query: 277 AFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           A  L  ++P  K   + S  F L +G + SKS GN +D    ++   +D LRY L     
Sbjct: 303 AMELGQSIPYKKMNALISSEFYLLEGAQFSKSEGNFVDMDAFLDTYSLDKLRYVLAATAP 362

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D  +     K R N++L    GN ++R ++   K+    +  P A  + D   L  C
Sbjct: 363 ETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFRELTCPEALEDKDRQFLDDC 422

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVE 453
            R++QE +       + +A + ++ L +  + YF+ Q PW+L K     R   +L+    
Sbjct: 423 QRIVQEAQAYYSKYSLRKACSAIMELAALGNVYFNDQAPWKLLKEGFAHRVEAILFCACY 482

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
             + LA++    +P  A +I+++L
Sbjct: 483 CQKLLALIAYPILPGTAWEIWNML 506


>gi|126462842|ref|YP_001043956.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|187647760|sp|A3PLG8|SYM_RHOS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|126104506|gb|ABN77184.1| methionyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 572

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 114/555 (20%), Positives = 230/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +     +++A    +S+D F R++  R+H   +     +++ G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
             ++S+ D  +  D          G D    +   N                       +
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R  A +D++ ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 LRETKHLYLRQRALKDEIEAWIDSKTDWPVLTTSIAKKWLHDGEGLQDRGITRD-LKWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD-------- 259
            +             + YVW DA   Y+  T    +     D    ++W  D        
Sbjct: 242 PVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTDADWERWWRTDRGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+  E +  +++   + L      M+   + +A +++ +L    + Y  +  PW + 
Sbjct: 422 PAGGSPGEREHQLVAELQQRLAAYEACMEAMEVRKAASELRALWVAGNEYLQSAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ--SLDQRLKP 495
           KT+P++A  ++ + + +IR  A++ + F+P  A  +   L   D +         + L  
Sbjct: 482 KTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMTSLGCEDWSWPADVGRALEVLPA 541

Query: 496 GFMLHKTFDPIFPRF 510
           G     T + +F + 
Sbjct: 542 GHGFT-TPEVLFRKI 555


>gi|255348394|ref|ZP_05380401.1| methionyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502935|ref|ZP_05381325.1| methionyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 550

 Score =  297 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 218/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T           +  KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ +++ E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDVAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|322692016|ref|YP_004221586.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456872|dbj|BAJ67494.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 616

 Score =  297 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 139/540 (25%), Positives = 228/540 (42%), Gaps = 53/540 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+T 
Sbjct: 3   VAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTA 62

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG       
Sbjct: 63  QELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVAIS 122

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAY 172
                      +  E      E  +G        +       NPV  +  E   F  + +
Sbjct: 123 PSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEH 182

Query: 173 QDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP-----DD 223
               L       +  L   +     +     GL      R   +  DWGI +P     D+
Sbjct: 183 YFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKGWIDN 242

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+  WP
Sbjct: 243 PNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQIWP 302

Query: 277 AFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           + +L+ N              L LP++V +  F+  +G+K S S G VI   +++    V
Sbjct: 303 SEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPV 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPG 381
           DA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P    
Sbjct: 363 DAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPPLDED 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ K + 
Sbjct: 423 SMTNEDRGLLEESSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI-KDDQ 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPGFM 498
            R  TVL+V  + +     LL  F+P  A K+++ L           L +     KPGF 
Sbjct: 482 ARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDKPGFT 541


>gi|312882030|ref|ZP_07741784.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370325|gb|EFP97823.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 499

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 177/472 (37%), Positives = 259/472 (54%), Gaps = 10/472 (2%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           +T I Y N +PH+GHAY  I+AD+  R+  L   +    TGTDEHG KI +AA  +    
Sbjct: 6   TTPIFYANGEPHLGHAYSGILADIFHRYSLLANSESCLITGTDEHGLKITQAASKSCTEV 65

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           + FVD+ S +F ++   L I  D FIRTT++ H      +WKK+ DKGDIY G Y G Y 
Sbjct: 66  EDFVDRKSASFAELWSALKIDPDVFIRTTDRFHAQFVEKVWKKLRDKGDIYLGNYQGQYC 125

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           +  E +YN  ++    D +Y       VQ  EEE Y FRLS Y+++LL +Y S+ +FI+P
Sbjct: 126 IGCEQFYNKRDL---VDEKYCAIHKTEVQSFEEETYLFRLSRYREQLLEFYTSNQDFIIP 182

Query: 190 IERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
              ++ V+  +K   L+DLS+SR    WGI +P D  + +YVWIDAL +YL+        
Sbjct: 183 TFTQDYVVKQLKEEPLEDLSVSRINHKWGISVPGDENHTIYVWIDALFSYLSAIQKAGYN 242

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
                K      H++GKDIL+FHAIYWPAFLL+  LPLPK +  HG+   +G KISKS+ 
Sbjct: 243 PDQLKKT----THILGKDILKFHAIYWPAFLLALELPLPKHLIVHGWWKVEGHKISKSIP 298

Query: 309 -NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
             V+ P     E+  D LRY L+++    +DG   +D LK  +NADL N   NLV R+ +
Sbjct: 299 ETVVHPKAFQTELSNDGLRYALIKQKPLFRDGDLVQDSLKHVINADLVNNFANLVKRNNT 358

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +ILK   G I            I++     L ++    Q   I      +  +++E++R+
Sbjct: 359 LILKQLSGEIVGITDLDIECRQIVTEAEVKLDKVINGYQTFDILIVSQLLNQILTELNRF 418

Query: 428 FDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           F  + PW + K    +  S+  +V   V+R++AIL    +P L+  I + L 
Sbjct: 419 FHERSPWLINKGLTREHVSSTCFVVANVVREIAILYSPIIPSLSESILNELG 470


>gi|322690077|ref|YP_004209811.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|320461413|dbj|BAJ72033.1| methionyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 616

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 138/540 (25%), Positives = 228/540 (42%), Gaps = 53/540 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+T 
Sbjct: 3   VAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTA 62

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG--- 126
           +   ++ +R        L +SYD F RTT   H    + ++K+  + G IYKG       
Sbjct: 63  QELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVAIS 122

Query: 127 --------WYSLRDEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAY 172
                      +  E      E  +G        +       NPV  +  E   F  + +
Sbjct: 123 PSTGRTLPDRYIEGECPICHAEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEH 182

Query: 173 QDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSR---KTFDWGIKIP-----DD 223
               L       +  L   +     +     GL      R   +  DWGI +P     D+
Sbjct: 183 YFLDLPALAEANKAWLETRKGWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKGWIDN 242

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWP 276
           P   +YVW DA+  YL+ +           K + W  D      + +GKD + FH+  WP
Sbjct: 243 PNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQIWP 302

Query: 277 AFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           + +L+ N              L LP++V +  F+  +G+K S S G VI   +++    V
Sbjct: 303 SEMLAYNGKGSKGGETGPMGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPV 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPG 381
           DA+RY++        D  +      +  N +LA+  GNLV+R  ++I K++  + P    
Sbjct: 363 DAVRYYISVAGPESSDSDFTWAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPPLDED 422

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           + T  D  +L   S     +  +++      AL++ + +V ++++Y  A +PW++ K + 
Sbjct: 423 SMTNEDRGLLEESSAAFDVVGSSIETHHQKHALSEAMRVVGDINKYISATEPWKI-KDDQ 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPGFM 498
            R  TVL+V  + +     LL  F+P  A ++++ L           L +     KPGF 
Sbjct: 482 ARLGTVLHVAAQAVSDANHLLAPFLPHSAQRVWEALGGTGTFSPLPELKEVEDLDKPGFT 541


>gi|282855068|ref|ZP_06264400.1| methionine--tRNA ligase [Propionibacterium acnes J139]
 gi|282581656|gb|EFB87041.1| methionine--tRNA ligase [Propionibacterium acnes J139]
 gi|314982128|gb|EFT26221.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090367|gb|EFT62343.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 601

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 133/526 (25%), Positives = 230/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H    + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSE 132

Query: 125 SG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QW 159
            G              +         +  +G        Q +P               ++
Sbjct: 133 MGAFESSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|238795773|ref|ZP_04639287.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720499|gb|EEQ12301.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 635

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 124/506 (24%), Positives = 215/506 (42%), Gaps = 47/506 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
             + +   +++ ++   G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P +                E E +FF L A+ D L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVMRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SK 252
           ++  + +SGL+   +SR    +G +IPD P    YVW+DA   Y+     L +  G    
Sbjct: 178 KMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDF 237

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +FW  D      H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS 
Sbjct: 238 DEFWRKDSDADLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSR 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  I     ++ +  D LRY+   +++    D   + +   +RVNAD+ N + NL SR+ 
Sbjct: 298 GTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNA 357

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +        +D ++    +     I +   ++   +A+ ++++L    +R
Sbjct: 358 GFINKRFAGKLADQ----LADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVANR 413

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D Q PW + K          +  + + + R L   L+  +P L  +    L       
Sbjct: 414 YIDEQAPWVVAKEEGRDAELQAICSMGINLFRVLMTYLKPVLPSLNERTEAFLNTE---L 470

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + S++Q L  G  ++ TF  +F R 
Sbjct: 471 TWDSIEQPLL-GHQIN-TFKALFNRI 494


>gi|300790060|ref|YP_003770351.1| methionyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299799574|gb|ADJ49949.1| methionyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 594

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 138/520 (26%), Positives = 215/520 (41%), Gaps = 58/520 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A N   T 
Sbjct: 5   VAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPITVQADNENSTP 64

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RTT   H +  + ++  +   G +      G  S
Sbjct: 65  QETADKYTRQIGNDLQGLGLSYDLFTRTTTGNHAEVTQQIFLALHRNGYVVPKTTRGAIS 124

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QWMEEEG 164
                     Y        G DG   +   N                      +++E E 
Sbjct: 125 PSTGRTLPDRYVEGTCPICGFDGARGDQCDNCGNQLDAAELINPKSRINGETPKFVETEH 184

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           YF  L A+   L  +  +  ++   +    + +           ++R   DWG+KIP + 
Sbjct: 185 YFLDLPAFTKTLGDWLSTKTDWRPNVLNFTKNLIDDMR---PRPITRD-LDWGVKIPLEG 240

Query: 224 ----PQYIMYVWIDALTNYL---TTTGYLDNPDGSKAKFWPA----DLHVIGKDILRFHA 272
               P    YVW DA+  Y               +  ++W        + +GKD + FHA
Sbjct: 241 WRDQPLKRFYVWFDAVIGYFSASVEWARRSGNPDAWQEWWNNADARSYYFMGKDNITFHA 300

Query: 273 IYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WPA L                  L LP ++ S  F+   G K S S G VI   + + 
Sbjct: 301 QIWPALLFGHNGEGDKGGEPGKYGKLHLPDEIVSSEFLTMSGSKFSTSRGRVIYVEDFLR 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LRYF+       +D  +  D   +R N +LAN  GNLV+RS+SM  K+    IP
Sbjct: 361 DFGPDTLRYFISVAGPETQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKNVG-AIP 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P A T +DE + ++  +       ++       A A+ + +V+  ++Y   Q+PW+L K
Sbjct: 420 RPEAPTAADEDLKALSRKAFDTAGAHLARSRFKLAAAEAMKVVTAANKYLSDQEPWKL-K 478

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +P R  TVL+  ++V+     LL  F+P  A K+ + L 
Sbjct: 479 DDPTRRDTVLHTALQVVSDANTLLTPFLPHSAQKVHEALG 518


>gi|114331896|ref|YP_748118.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313375|sp|Q0AES9|SYM_NITEC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114308910|gb|ABI60153.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 701

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 115/541 (21%), Positives = 205/541 (37%), Gaps = 45/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             + +++A+ Y N   H+GH  E I  D+  RF ++ G  V +    D HG  I   A+ 
Sbjct: 4   RNILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMQGHTVYYVCADDAHGTPIMLRAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  + +             I++D +  T           +++K+   G I     
Sbjct: 64  EGISPEALIARVYTEHLRDFTGFHIAFDQYYSTHSDETRYYAEDIYQKLKAAGLIAIRSI 123

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y      +  D  V             G   +   A + P +               
Sbjct: 124 EQLYDPVKNLFLPDRFVKGECPKCGAVDQYGDSCEACGAAYTPTELKNPYSAISGATPIR 183

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF----VKSGLKDLSLSRKTFD 215
              E +FF+LS  +        +     L +E  N++  +     ++ L D  +SR    
Sbjct: 184 KASEHFFFKLSDPRCSDFLRKWTRSGNHLQVEAANKMAEWLGEEGENKLSDWDISRDAPY 243

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP +     YVW+DA   Y+ +             ++W         H IGKDIL 
Sbjct: 244 FGFEIPGETDKYFYVWLDAPIGYMGSFKKLCTEQGIDFDQYWKKGATTELYHFIGKDILY 303

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI-EVIEEVGVDALRYF 328
           FHA++WPA L +A    P ++F+HGF+   GEK+SKS G  I     + + +  + LRY+
Sbjct: 304 FHALFWPAMLENAGYRTPTQIFAHGFLTVNGEKMSKSRGTFITAESYLQQRLNPEWLRYY 363

Query: 329 LVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +     +D   + +    RVNADL     N+ SR    I K +DG +     +    
Sbjct: 364 YAAKLNGSMEDIDLNLEDFVTRVNADLVGKYINIASRCAGFISKCFDGKLVAGEDYQLLQ 423

Query: 388 ESILSVCSRVLQEIRE-NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           +++    S     + E   + +    A+  ++    EV+       PWE+ K        
Sbjct: 424 QTVDEYFSSWQPGVIEAAYEARDFSAAIRHIMKRTDEVNELIHVLAPWEIAKDETREREL 483

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKI-----FDILFVADENRCFQSLDQRLKPGFML 499
                + +++   L+  L+  +P  A +I     +  L    +          L  G  +
Sbjct: 484 HRACSLGIQMFYLLSCYLKPVLPYTAERIEHFLNWMALGWPRQQAGQPLSTMLLPAGHTI 543

Query: 500 H 500
           +
Sbjct: 544 N 544


>gi|225554399|gb|EEH02697.1| methionyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 596

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 115/546 (21%), Positives = 225/546 (41%), Gaps = 41/546 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV ARF R  G+  L+  GTDE+G      
Sbjct: 16  GKRNVLITSALPYVNNVPHLGNIIGSVLSADVFARFCRGRGIPTLYIGGTDEYGTTTEAK 75

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     T +   D+      ++    DIS+D F RTT +   D  + +++K+ + G + +
Sbjct: 76  ALIEKCTPRELCDKYHAIHAEIYQWFDISFDIFGRTTTQLQTDITQDIFRKLYNNGFLKE 135

Query: 122 GCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +  Y    +++  D  V        Y  A G   +     ++ ++ +    ++  + 
Sbjct: 136 RMTTQLYCQEHQSFLADRFVEGECPTCSYTDARGDQCDMCGQLLEPLQLKNPRCKIDGFA 195

Query: 174 DKLL------------------SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                                  + ++      P   ++  ++++K GL+  S++R    
Sbjct: 196 PITKDTKHIFLELDKLQPEVEDYFRKASTNGAWPNNGKSITLAWLKEGLQPRSITRD-MK 254

Query: 216 WG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  + +P     ++Y W DA   Y++ T         K    P D+     IGKD + F
Sbjct: 255 WGTQVPLPGYEDKVIYSWFDACIGYVSITA-KYTDQWEKWWRNPEDVQLYQFIGKDNVVF 313

Query: 271 HAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H++ +PA  +    P  K   + +  ++ ++G K SKS G  +      +  V  D  RY
Sbjct: 314 HSVIFPATQVGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQQTGVSADVWRY 373

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTES 386
           +L+       D  +  D      N+ L N +GN  SR +  +   + + ++P    + E 
Sbjct: 374 YLLSRRPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRFYNNIVPDWTKYHEP 433

Query: 387 DESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
              I     +R+L +  E +    +   LA  + +  + + +    K   +L ++ P + 
Sbjct: 434 SFEIWKEEINRLLTKYVEELDAVKLRAGLATALHISQQGNLFLQTNKLDGKLHESEPAKC 493

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           + V+ +TV +I  LA ++  ++P  +  I   L V             +KP   + K  +
Sbjct: 494 AAVIGLTVNLIHLLASVIAPYMPATSKSICTQLRVEPLAIPDHWSADSIKPSHEIGKP-E 552

Query: 505 PIFPRF 510
            +F R 
Sbjct: 553 HLFRRI 558


>gi|68565977|sp|Q6A707|SYM_PROAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|50840790|gb|AAT83457.1| methionyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|314924211|gb|EFS88042.1| methionyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314965000|gb|EFT09099.1| methionyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|315093650|gb|EFT65626.1| methionyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103869|gb|EFT75845.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315106150|gb|EFT78126.1| methionyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|327325414|gb|EGE67218.1| methionine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 601

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 134/526 (25%), Positives = 229/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H    + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSE 132

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|315079929|gb|EFT51905.1| methionyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 601

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 135/526 (25%), Positives = 229/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSE 132

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A    L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAGSLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|300932586|ref|ZP_07147842.1| methionyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 611

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 144/531 (27%), Positives = 230/531 (43%), Gaps = 55/531 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A+
Sbjct: 3   QRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMIGNDVLMVSGTDEHGTPLLVQAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT + H+   + L++ + D G +    
Sbjct: 63  KEGVSVQELADRYNRIIVEDLVGLGLSYDLFTRTTTRNHYAVVQELFRGLYDNGYMVTQT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEEEGYF 166
             G  S        D  +             G   +            NPV  +  E   
Sbjct: 123 TRGAISPSTGRTLPDRYIEGTCPICGATDARGDQCDNCGNQLDPEDLINPVSKINGETPE 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L          L   R +   + +K  L  L   R        DWG+ IP
Sbjct: 183 FVDTEHFMLDLPALAEALTTWL-KGRTDWRPNVLKFSLNLLENIRPRAMSRDIDWGVPIP 241

Query: 222 DDPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
            +         +YVW DA+  YL+ +        D    + W  D      + +GKD + 
Sbjct: 242 IEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRKWWNDPEAVSYYFMGKDNIT 301

Query: 270 FHAIYWPAFLLSA----------------NLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           FH+  WPA LL                   L LP +V S  F+   G K S S G VI  
Sbjct: 302 FHSQIWPAELLGYAGEGSRGGEAGDLAEPTLNLPTEVVSSEFLTMSGSKFSSSKGVVIYV 361

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            + ++E G D LRYF+        D  +  D   +R+N++LAN  GNLV+R+VSM  K++
Sbjct: 362 RDFLKEFGPDPLRYFIAMAGPETTDTDFTWDEFVRRINSELANEWGNLVNRTVSMAHKNF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             + P  G  T++D ++L    +  + + + +Q       + + + +    ++Y  AQ+P
Sbjct: 422 GEVPPL-GTLTDADRALLDESEQAFEIVGKALQASRFKAGITEAMRIAGRANQYIAAQEP 480

Query: 434 WELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           W+L K +   +R  TVL+V ++V+  +  +L  ++P  A KIF+ L    E
Sbjct: 481 WKLAKDDSQRERLGTVLHVALQVVSDINTMLTPYLPFSAQKIFETLGGTGE 531


>gi|315109299|gb|EFT81275.1| methionyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 601

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSE 132

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|289424927|ref|ZP_06426706.1| methionine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289427634|ref|ZP_06429346.1| methionine--tRNA ligase [Propionibacterium acnes J165]
 gi|295131252|ref|YP_003581915.1| methionine--tRNA ligase [Propionibacterium acnes SK137]
 gi|289154626|gb|EFD03312.1| methionine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289159125|gb|EFD07317.1| methionine--tRNA ligase [Propionibacterium acnes J165]
 gi|291377079|gb|ADE00934.1| methionine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313763264|gb|EFS34628.1| methionyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313773242|gb|EFS39208.1| methionyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313801126|gb|EFS42392.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313808697|gb|EFS47151.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313812158|gb|EFS49872.1| methionyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313817877|gb|EFS55591.1| methionyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313819790|gb|EFS57504.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823448|gb|EFS61162.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313824921|gb|EFS62635.1| methionyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313830175|gb|EFS67889.1| methionyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833098|gb|EFS70812.1| methionyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314919474|gb|EFS83305.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925899|gb|EFS89730.1| methionyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314960728|gb|EFT04829.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314963400|gb|EFT07500.1| methionyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314968947|gb|EFT13045.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314979438|gb|EFT23532.1| methionyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314984228|gb|EFT28320.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315077250|gb|EFT49312.1| methionyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315083259|gb|EFT55235.1| methionyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315096776|gb|EFT68752.1| methionyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315097846|gb|EFT69822.1| methionyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100751|gb|EFT72727.1| methionyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327325498|gb|EGE67301.1| methionine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327449504|gb|EGE96158.1| methionyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327451674|gb|EGE98328.1| methionyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327452137|gb|EGE98791.1| methionyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328752392|gb|EGF66008.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 601

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSE 132

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAAGELTDADRELLDAAATGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|327332352|gb|EGE74088.1| methionine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 601

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 134/526 (25%), Positives = 231/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSE 132

Query: 125 SG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QW 159
            G              +         +  +G        Q +P               ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAVGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|288916473|ref|ZP_06410850.1| methionyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288352073|gb|EFC86273.1| methionyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 562

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 135/513 (26%), Positives = 226/513 (44%), Gaps = 40/513 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + ++ A  Y N QPH+GH A   + AD+ AR+ R+ G  VL  +G+D HG  I   A 
Sbjct: 15  RPVLVAVAWPYANGQPHLGHIAGAYLPADIFARYQRMIGNRVLMVSGSDAHGTPITVRAD 74

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +  VD+    F  +   L IS+D F  T    H    + ++ ++ + G IY   
Sbjct: 75  EEGVTPQAIVDRYHPEFLRIWSDLAISFDLFTTTRTHNHEVVAQSVFTRLREAGYIYPKE 134

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP--------------VQ 158
            S ++      +  D  V            +G   +      +P               +
Sbjct: 135 TSQFFDPDAGRFLPDRYVVGTCPHCSYTQARGDQCENCGRTLDPELLVDPRSKVTGAVPE 194

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +   +F RLS   D+LL + ++   +       N  + FVK GL D +++R   DWG+
Sbjct: 195 MRQTTHFFLRLSGLSDQLLDWLQTRQGWR--RHVLNWSVQFVKDGLHDRAITRD-LDWGV 251

Query: 219 KIPDD---PQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPAD-----LHVIGKDIL 268
            +P D   P   +YVW +A+  YL+ +        D    + W  D      + +GKD +
Sbjct: 252 PLPTDELGPGKRLYVWFEAVIGYLSASKEWAAGTGDPEAWRAWWEDPEAAAYYFVGKDNI 311

Query: 269 RFHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            FH + WPA LL    L LP  V ++ ++   G K SKS G      E ++ +  DALR+
Sbjct: 312 PFHTVIWPAMLLGHGGLDLPTDVPANQYVTFGGAKASKSAGIGRGVREYLDLLQPDALRF 371

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L   +    D       + +RVN +L    GNLV+R ++ I K + G +P  G      
Sbjct: 372 ALASVLPEQNDTEISDADIVRRVNDELIANWGNLVNRVMAQINKFFGGALPETGDLDGVH 431

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +L+     L  + E ++   +  AL   + + +EV+ Y   ++PW+  K +   A+  
Sbjct: 432 AELLASVDAGLVRVGELLERVELRAALRAAMEISAEVNAYLYREEPWKTVKVDKATAAHS 491

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           L V V+ I  +   L  F+P  + ++ ++L + 
Sbjct: 492 LAVAVQAISGITTALAPFLPFSSARVAEVLGID 524


>gi|222478882|ref|YP_002565119.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451784|gb|ACM56049.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 714

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 113/513 (22%), Positives = 211/513 (41%), Gaps = 51/513 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  DV  R     G +  F +G+D HG  +A  A+  GV+
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDVYRRALERLGQETAFVSGSDMHGTPVAVNAEQEGVS 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F       +       ++ +D++  T ++ +    + L + + + G +Y+      Y
Sbjct: 74  PEQFALDWHEQYAATFPKFNVEFDNYGHTHDETNTAVTQQLVRDLDEGGHLYEKEIMVAY 133

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
              D+ +  D  V            G   +                     NP ++ E  
Sbjct: 134 DPVDDQFLPDRYVEGTCPYCGAHARGDECDEGCQRHLEPGEVEDPESTITGNPAEYRERT 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             FF +SA+ + L  +             RN+   +++ GL+D  ++R   DWGI  P +
Sbjct: 194 HQFFEVSAFSEYLSGFL---DRLEGTSNARNQPREWIEQGLQDWCITRD-MDWGIDYPGE 249

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------------LHVIGKD 266
                ++YVW+DA   Y+++T       G+ A  W A                +HVIG+D
Sbjct: 250 NPQDLVLYVWVDAPIEYISSTKQYTERVGADAFDWEAAWKEGASDAHPEGGEIVHVIGRD 309

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           I++ H I+WPA L + +   P+ V + GF+   G+  S S    +   E ++E    D L
Sbjct: 310 IIQHHTIFWPAMLEATDHTEPRAVMASGFVTLGGKGFSTSRDRAVWADEYLDEGFHPDPL 369

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L       +D  +  +  + RVN +L   +GN + RS+    ++YD          E
Sbjct: 370 RYYLATNGGFQQDVDFSWEKFRDRVNTELVGTVGNFLYRSLLFAHRNYDDAPIADATSDE 429

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
               +       + +    + +  +      V  L    + Y    +PW+L   +P+ A+
Sbjct: 430 ----VAERIEEAIADFEAAVNDYSVRAVGDAVTDLARFGNEYIQRSEPWKLVDDDPEEAA 485

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V++  V + + +A+L +   P+   +++D L 
Sbjct: 486 QVIHDCVAIAKAIAVLFEPIAPEKTERLWDQLG 518


>gi|325107887|ref|YP_004268955.1| methionyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968155|gb|ADY58933.1| methionyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 680

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 125/523 (23%), Positives = 212/523 (40%), Gaps = 43/523 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   HIGH  E +  D+  RF +L G   LF    D HG  I   A+ 
Sbjct: 3   RKILVTAALPYANGHIHIGHLVEYLQTDIWVRFQKLRGHRCLFFCADDTHGTAIMMRARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +    +++ SR+ +       I +D++  T  + +      +WK + + G +     
Sbjct: 63  EGRSETELIEEMSRSHQQDFADFGIEFDNYGSTDSEENKILGERIWKSLREAGLVETRDV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQH------NPVQWMEEEGYFF 167
           +  Y  ++  +  D  V             G + +   A +      NPV          
Sbjct: 123 TQLYDPQEGTFLADRYVKGNCPKCGADDQYGDNCEVCGATYSPSELKNPVSVYSGTTPEV 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERR-----NEVISFVKSG--LKDLSLSRKTFDWGIKI 220
           R + +    +       +      +         +     G  L+D  +SR    +G +I
Sbjct: 183 RTAPHAFVNIEQLHDFLDDWTQSGKHLQSEVANYLKGHFLGEPLRDWDVSRPAPYFGFEI 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           PD P +  YVW DA   Y+ +T      +    + W AD      H IGKDI  FH ++W
Sbjct: 243 PDMPGHYWYVWFDAPIGYIASTWQWCKRNNETLESWWADDSTEIHHFIGKDITYFHTLFW 302

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L +A L LP KV  HGF+   GEK+SKS G  I     +  +    LRY+   ++  
Sbjct: 303 PAMLKTAGLNLPTKVHIHGFLKVNGEKMSKSRGTFIQARTYLNNLDPAWLRYYFATKLNS 362

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   +      +VNADL   + N+ SR    I         T       D  + +  
Sbjct: 363 RLDDLDLNVQEFVDKVNADLVGKVVNIASRCAKFI------GGQTLCETYPDDGGLFAKA 416

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTV 452
           +   ++I  + +N     A+ +++ L    ++Y +  +PW+L+K     +    V  V +
Sbjct: 417 AAAGEQIAAHYENCDYSPAMREIMQLAEAANKYVEDNQPWKLRKDPEKAEELREVCTVAL 476

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            + RQ+ I L   +P+LA +  ++L     +    S D+   P
Sbjct: 477 NLFRQVVIYLSPVLPRLAEQAGELL-----SDPLDSWDKSQTP 514


>gi|32473761|ref|NP_866755.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|68565994|sp|Q7URP3|SYM_RHOBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|32444297|emb|CAD74295.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 679

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 126/520 (24%), Positives = 207/520 (39%), Gaps = 39/520 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L ++ A+ Y N   HIGH  E +  D+  RF +L G   L+    D HG  I   A+ 
Sbjct: 3   RRLLVTAALPYANGPIHIGHLVEYLQTDIWVRFQKLRGNRCLYICADDTHGTAIMIRARG 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +    +++ S   +       I +D +  T  + +   C  +WK + D   + +   
Sbjct: 63  EGRSEIELIEETSEAHQRDFAGFGIEFDHYGSTNSEENRTLCHQIWKSLRDADLVVERSV 122

Query: 125 SGWYSLRDEAYYNDDEVYKGA----------DGQYYNAQHNPVQWMEEEG---------- 164
              Y    E +  D  V              D       ++P + ++             
Sbjct: 123 EQLYDPEAETFLADRFVRGTCPKCGTPNQAGDNCNCGHTYSPTELIDPVSTLSGATPIIK 182

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              + F         LS + S+   + P         F+   L+D  +SR    +G +IP
Sbjct: 183 EAEHLFVELEKLHDFLSEWVSNSGALQPETANYLKGHFLADELRDWDISRPAPYFGFEIP 242

Query: 222 DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276
           D P    YVW DA   Y+ +T  + D      A +W +D     H IGKDI  FH ++WP
Sbjct: 243 DAPGNYWYVWFDAPIGYIASTQQWCDANGEDLADWWKSDDCEVHHFIGKDITYFHTLFWP 302

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             L +A   LP KV  HGF+   G+K+SKS G  +     ++ +   ALRYF   +++  
Sbjct: 303 GMLKTAGFSLPTKVHIHGFLNVNGKKMSKSDGTFVKAETFLKHIDPSALRYFYATKLSSR 362

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D     D   ++VN+DL   + NL SR                      D  +    +
Sbjct: 363 VEDLDLGVDEFVEKVNSDLVGKVVNLASRVGKFA------SRTGLAPSYPEDGGLFQAAA 416

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVE 453
               EI    ++    +A+  ++ L    + + +  KPWE+ K     D    V  V + 
Sbjct: 417 AKGDEIASAYEDGEFSKAMRLIMELADAANPFVEHAKPWEMNKAPERQDELRDVCTVALN 476

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           + RQLA+ L   +P+LA K  D+L   +    ++     L
Sbjct: 477 LFRQLAVYLAPVLPELAKKCGDLLG--EPITSWEQSQTPL 514


>gi|314930233|gb|EFS94064.1| methionyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
          Length = 601

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H D  + ++ ++ + G + K   
Sbjct: 73  EGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDNHADVTQEIFTRLHENGYVVKRSE 132

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIDPRSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 369 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HEIPAAGELTDADRELLDTAATGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 532


>gi|161621793|ref|YP_056415.2| methionyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 592

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 133/526 (25%), Positives = 230/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 4   NVLAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   ++  R        L +SYD +  T    H    + ++ ++ + G + K   
Sbjct: 64  EGVTAQECAEKYHRIIAADLQGLGLSYDLYTSTLTDNHAHVTQEIFTRLHENGYVVKRSE 123

Query: 125 SG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QW 159
            G              +         +  +G        Q +P               ++
Sbjct: 124 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLIGPRSKTTGAAPEF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   + + +  +      L+  +++R   DWGI+
Sbjct: 184 RETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHNLL---EELRPRAITRD-LDWGIR 239

Query: 220 I-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +      D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 240 VPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 299

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 300 IVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTEIVSSEFLTMSGSKVSNSRGATIF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+RS+SM  K+
Sbjct: 360 VGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRSISMAFKN 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L   +     +   + +     A+ + + +V   + Y  A++
Sbjct: 420 C-HEIPAAGELTDADRELLDAAAAGFDTVGGLLAHARFKAAITEAMRIVGLANAYISAEE 478

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  ++  F+P  A KI++ L 
Sbjct: 479 PWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHSAQKIYEALG 523


>gi|110289054|gb|ABB47540.2| methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 540

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 110/516 (21%), Positives = 214/516 (41%), Gaps = 45/516 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ R  + +++A+ Y N  PH+G+    ++ AD  AR+ RL G +VL+  GTDE+G    
Sbjct: 11  VEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G + +   D+     +++ +  DIS+D F RT+  +  + C+ ++ K+ D   +
Sbjct: 71  TKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWL 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-------------------HNPVQWM 160
            +      Y    + +  D  V      +  N                      NP   +
Sbjct: 131 SENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKV 190

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSR 211
                  R + +    L       E                 +   +++K GLK   ++R
Sbjct: 191 CGSTPCVRDTDHLFLELPLLREKLEKYIDETSLTGSWSQNAIHATNAWLKEGLKPRCITR 250

Query: 212 KTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKD 266
               WG+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD
Sbjct: 251 D-LKWGVPVPHEKYKDKVFYVWFDAPIGYISITA-CYTPEWEKWWKNPENVELYQFMGKD 308

Query: 267 ILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVD 323
            + FH + +P+ LL         K +    ++ ++  K SK+ G  +   +     +  +
Sbjct: 309 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPE 368

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT 379
             RY+L+       D  +    L+ + N +L N +GN ++R +S I K     Y  ++P 
Sbjct: 369 VWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVVPD 428

Query: 380 PGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                     +S+     +++ +  + M    I + L   +++ SE + Y    + W+L 
Sbjct: 429 SPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWKLY 488

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           K +P   +TV+  +V ++  LA LL+ F+P  +  +
Sbjct: 489 KQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDV 524


>gi|213403284|ref|XP_002172414.1| methionyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000461|gb|EEB06121.1| methionyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 781

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 108/562 (19%), Positives = 217/562 (38%), Gaps = 56/562 (9%)

Query: 1   MKEREK-----------LYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFT 48
           M+ER+K           + I++A+ Y N  PH+G+     + ADV AR+HR      L+ 
Sbjct: 207 MQERKKSGVLPKPNSRNILITSALPYVNNVPHLGNIIGSTLSADVFARYHRARNNTTLYI 266

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
            GTDE+G      A   GV+ K   D+  +  +++ D   + +D F RTT  +  +  + 
Sbjct: 267 CGTDEYGTATETKALEEGVSPKELCDKYHKLHKEVYDWFQLDFDFFGRTTTPKQTEISQH 326

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ------- 153
           ++ ++ ++  +     +  Y    + +  D  V             G   +         
Sbjct: 327 IFNRLYERDYMEVDSMTQLYCEEHKGFLADRYVEGTCPKCGFDDARGDQCDGCGQLLNAF 386

Query: 154 --HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKS 202
              NP   +++     R + +    L   +   +       +             S++K 
Sbjct: 387 ELINPTCKLDKTTPVKRETRHIFLSLDKLQPQIQEWFQKSSKEGHWSNNGVAITDSWLKE 446

Query: 203 GLKDLSLSRKTFDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           GL+   ++R    WG  +P +     ++YVW DA   Y++ T    +      K  P ++
Sbjct: 447 GLRPRCITRD-LKWGTPVPLEEFKDKVLYVWFDATIGYISITANYTDEWKQWWKN-PENV 504

Query: 261 ---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE 315
                +GKD + FH + +P  LL  +        + +  ++ ++  K SKS G  +    
Sbjct: 505 KLYQFMGKDNVPFHTVIFPGSLLGTDEKWTMLHHINTTDYLNYESGKFSKSRGIGVFGNN 564

Query: 316 VIE-EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
             E  +     RY+L+       D  +       R N++L   IGNLV+R V      Y+
Sbjct: 565 AKELGLSPSVWRYYLLASRPETSDTMFTWKEFITRHNSELLANIGNLVNRVVKFTTAKYN 624

Query: 375 GMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
           G++P           +    ++   + +L++    ++   +   L   + L +  +++  
Sbjct: 625 GLVPYYLEDASVGSGKLKTELVKDVNAILRKYNTALEAVKLREGLRIAMELSARGNQFLQ 684

Query: 430 AQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             +   +L      + +  +  T+ ++  LA +L  F+P  ++ I+  L           
Sbjct: 685 DNRVDNKLFTNERQKCADAIGYTLNLVYLLASILSPFIPATSDSIYKQLNAPALAIP-DE 743

Query: 489 LDQRLKPGFMLHKTFDPIFPRF 510
               L PG  +    + +F R 
Sbjct: 744 WTLDLLPGHRIGNA-EYLFTRI 764


>gi|302684835|ref|XP_003032098.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8]
 gi|300105791|gb|EFI97195.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8]
          Length = 539

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 181/533 (33%), Positives = 265/533 (49%), Gaps = 52/533 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAA 62
           +  YI+T I YPNA PHIGH Y ++IAD+ AR+ RL   +    F  GTDEHG KI +AA
Sbjct: 27  KPSYITTPIFYPNAVPHIGHLYSLVIADIFARYSRLRHPEKPTYFLAGTDEHGIKIQRAA 86

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G     F D  S  FR ++   DISY  F+RTT ++HH     +WK++ +KG IYK 
Sbjct: 87  EARGEEPLAFCDTLSAQFRRLSQAADISYTVFMRTTSEQHHRAVVDVWKRLDEKGLIYKA 146

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADG-------QYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+GWYS+ DE +Y D +V    D               N V+W  EE Y FRLSA+QD 
Sbjct: 147 AYAGWYSVSDECFYTDAQVESVPDPKDPTKTIMISTETKNAVEWSSEENYMFRLSAFQDA 206

Query: 176 LLSYYESH----------PEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDD 223
           LL +Y++                P      V     + L DLS+SR      WG+ +P D
Sbjct: 207 LLKHYKNSADANGTRPLPTRIYPPQAHAQIVDILENAPLADLSISRPRSRLSWGVPVPGD 266

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS--------KAKFWPADLHVIGKDILRFHAIYW 275
           P++ +YVW DAL  YL+  GY    D +            WP +L VIGKDILRFHA+Y 
Sbjct: 267 PEHSIYVWFDALLVYLSGVGYPFKQDAAGVFDQGAIARSGWPPNLQVIGKDILRFHALYL 326

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L++ N PLP ++ SHG    +G K+SKSLGNV DP + +E  GVD +RY+L R    
Sbjct: 327 PAVLVALNFPLPGRLLSHGHWTVEGRKMSKSLGNVADPFDAMERHGVDCVRYYLARVGGK 386

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D              + A G    +   V   L   D +             + ++  
Sbjct: 387 FRDDV-----------GEYAMGYHTALCILVLSALATDDPL-----------RELHTIAK 424

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + +++ E + +  +  A+  +   +  +++ F    P++ K T+P+ A  +  V+V+++
Sbjct: 425 ALPEQVEERLLDMDVAGAITHITEALKLLNKIFGDVAPFQ-KTTSPEAAYNLHVVSVDLL 483

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
           R + + LQ F PK A  + D L V +  R +Q          +  +    IFP
Sbjct: 484 RVVGVCLQPFAPKAAGVLLDALRVPEGKRSWQDAQGSDAVDALAVERGVRIFP 536


>gi|258654673|ref|YP_003203829.1| methionyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258557898|gb|ACV80840.1| methionyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 611

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 144/531 (27%), Positives = 223/531 (41%), Gaps = 67/531 (12%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + ADV +R+ R+ G DVL  +GTDEHG  I   A   GV+ 
Sbjct: 9   VAWPYANGPRHIGHVSGFGVPADVFSRYQRMAGNDVLMVSGTDEHGTPILVQADQEGVSA 68

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RT+ + H+   + L++ +   G           S
Sbjct: 69  RELADRYNRVIVEDLHGLGLSYDLFTRTSTRNHYAVVQELFRTVHRNGYFVAKTTMSAIS 128

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHN---------------------PVQWMEEE 163
                     Y        G DG   +   N                     PV + E E
Sbjct: 129 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDPIDLINPRSRINGETPV-FTESE 187

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +F  L A  D L  +  +  ++   + R +  +      LK  +++R   DWGI +P D
Sbjct: 188 HFFLDLPALADALGGWLRTRTDWRPNVLRFSLNLLDD---LKPRAMTRD-IDWGIPVPLD 243

Query: 224 -----PQYIMYVWIDALTNYLTTTGYLDNPD-------GSKAKFWPAD-------LHVIG 264
                P   +YVW DA+  YL+ +                  + W           + +G
Sbjct: 244 GWRDRPDKKLYVWFDAVIGYLSASIEWARRFGKNGEPDPDAWQRWWHGGDEQARAYYFMG 303

Query: 265 KDILRFHAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA LL                 L LP +V S  F+   G K S S   V
Sbjct: 304 KDNITFHSQIWPAELLAYDGRGEHGGSAGSFGTLNLPTEVVSSEFLTMSGSKFSTSRRTV 363

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   + + E G D+LRYF+       +D  +  +   +R N +LAN  GNLV+RSVSM  
Sbjct: 364 IYVGDFLREFGPDSLRYFIAAAGPENQDADFTWEEFVRRNNFELANEWGNLVNRSVSMAH 423

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++ G+ P   A T++D  +L         + + +       A A+ + +V   ++Y   
Sbjct: 424 KNFGGI-PAGTARTDADVELLRASEAAFATVGDLLSRSRFKAASAEAMRVVGLANKYISE 482

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +PW+L K +P+R  TVL+  ++V+     LL  F+P  +  +F+ L  A 
Sbjct: 483 SEPWKL-KDDPERQGTVLHTALQVVDDAKTLLTPFLPHSSQAVFEALGGAG 532


>gi|84497814|ref|ZP_00996611.1| methionyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381314|gb|EAP97197.1| methionyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 601

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 131/538 (24%), Positives = 230/538 (42%), Gaps = 55/538 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   H+GH     + +DV +R+ R+ G DVL  +G+DEHG  I   A  
Sbjct: 3   KILSAVAWPYANGPRHLGHVAGFGVPSDVFSRYMRMAGHDVLMVSGSDEHGTPILVLADQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +  VD+N     +    L  +YD + RTT   H+   + L+K++   G + +   
Sbjct: 63  QGVTPQELVDKNHAIIANELADLGCAYDLYTRTTTTNHYSVAQELFKQVHTNGYMIEQTT 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------QW 159
            G  S        D  +            +G        Q  P               ++
Sbjct: 123 RGAISPSTGRTLPDRYIEGTCPICGYTEARGDQCDNCGNQLEPTDLIDPKSKINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E + +F  L A    L  + E             +    +   ++  +++R   DWGI 
Sbjct: 183 IETQHFFLDLPALAVALREWLEGREASGTWRPNVIKFSLNILEEIRPRAMTRD-IDWGIP 241

Query: 220 IPDDPQ-----YIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDI 267
           +P +         +YVW DA+  YL+ +           + + W  D      + +GKD 
Sbjct: 242 VPLEGWEDQSAKRLYVWFDAVIGYLSASVEWARRQGDPERWREWWNDPEALSYYFMGKDN 301

Query: 268 LRFHAIYWPAFLL-------SANLP-------LPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + FH+  WPA LL           P       LP +V S  ++  +G++ S S G+VI  
Sbjct: 302 ITFHSQIWPAELLAYAGRGDKGGEPGTFGVLGLPTEVVSSEYLTMEGKQFSSSRGHVIYI 361

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V+E  G D +RYF+       +D  +      +R N++L  G GNLV+R+ +MI K +
Sbjct: 362 RDVLERYGPDPIRYFICAAGPENQDSNFTWAEFVQRNNSELVAGWGNLVNRTGAMIAKSF 421

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
              IP PG     DE++ +        + + +  Q I  A+ + +  V +V++Y    +P
Sbjct: 422 G-EIPQPGPLEPVDEAVRAATLAAFDTVGDLLAKQRIKAAVNEAMRAVGDVNKYVTDTEP 480

Query: 434 WELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           ++LK  +  +R +TVL+  ++ +  L  +L  F+P  +N++   +    E      ++
Sbjct: 481 FKLKGDDQRERLATVLHTLIQCVSDLNTILAPFLPHASNRVHAFIGGEGEFTPMPVIE 538


>gi|237804381|ref|YP_002888535.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310833|ref|ZP_05353403.1| methionyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317133|ref|ZP_05358379.1| methionyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|231272681|emb|CAX09584.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436472|gb|ADH18642.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 550

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 127/507 (25%), Positives = 217/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T       G      KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|254449433|ref|ZP_05062870.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198263839|gb|EDY88109.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 570

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 113/553 (20%), Positives = 222/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLIGSQLPADLYARYLRGRGHEVLFLCATDEHGTPAELAATK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A      +  +      D+A    +S+D + R++  ++    +     ++DKG I +   
Sbjct: 63  ADKPVAEYCAEMWTVQSDLAARFGLSFDHYGRSSSPQNRALTQHFAGVLADKGLIEERME 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
           +  YS  D  Y  D  +            +G        Q +PV               +
Sbjct: 123 TQMYSHEDGRYLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPYSTISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  +   S  ++ + ++ +S   + +      +       GL+D  ++R   DWG+
Sbjct: 183 MRDTKHLYLLQSKLKNDIEAWIDSQTGWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD--------LH 261
            +             + YVW DA   Y+       +       A++W  D          
Sbjct: 242 PVMRGDAPWPGMEDKVFYVWFDAPIEYIACAQEWADATGGQDWARWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++ ++ P      + S  F+ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIIGSDEPWKRVDYLKSFNFLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +   N DLA+ +GN VSR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPETSDAEFTWEAFQTDTNKDLADVLGNFVSRVTKFCRSKFSEDVPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G + +++  +++     L   +  M    + +A A+V ++ +  + Y  A  PW + K 
Sbjct: 422 GGEYGDAENKLIADLQIRLTAYQAAMDAIEVRKAAAEVRAMWAAGNEYLQAAAPWSVFKV 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRLKPGF 497
           +PD+A+  + + + +IR  A+L   F+P  +  +   +     D      +  + L  G 
Sbjct: 482 DPDQAAAQIRLALNLIRIYAVLSAPFIPTASATLLSAMNTMDMDWPDDMDAAARALPAGH 541

Query: 498 MLHKTFDPIFPRF 510
                 + +F + 
Sbjct: 542 PFT-VPENLFAKI 553


>gi|325507278|gb|ADZ18916.1| methionyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328914829|gb|AEB55662.1| methionyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 551

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 135/520 (25%), Positives = 225/520 (43%), Gaps = 38/520 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +VD   +  +D  D L IS D F RTT   H D  +  +K++  KG I     
Sbjct: 64  AGMGYQEYVDMYHKIHKDTFDKLGISIDFFSRTTNPFHKDLVQDFYKELKSKGLIENQIS 123

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQH------------NPVQWMEEEGYFF 167
              YS  +  +  D          G DG   +               NP   +       
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVNPRSKLSGSQLVL 183

Query: 168 RLSAYQDKLLSY-----YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + + +    L               LP   R  V  ++K  L+  +++R    WGI +PD
Sbjct: 184 KETEHAFLHLERMVDPLLAYIDTCYLPEHVRKFVTDYIK-NLRPRAITRD-LSWGIPVPD 241

Query: 223 DPQYIMYVWIDALTNYLTTTGYL-------DNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            P  + YVW DA   Y++ T          D       +     +  IGKD + FHA  +
Sbjct: 242 FPNKVFYVWFDAPIGYISGTMDWAASLSNPDAWKDFWLEESTEYVQFIGKDNIPFHAAIF 301

Query: 276 PAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA  L  ++P  K   + S  F L +G + SKS GN +D    ++   +D LRY L    
Sbjct: 302 PAMELGQSIPYKKMDALVSSEFYLLEGYQFSKSEGNYVDIDSFLDTYSLDKLRYVLAATA 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILS 392
               D  +     K R N++L    GN ++R ++   K+ +  +  +     + D   L 
Sbjct: 362 PETSDSEFTFIDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELAYSTDLLEDQDRKFLD 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVT 451
              +++++ +E+     + +A   ++ L +  + YF+ Q PW+L K     R   +L+  
Sbjct: 422 HAQKIVRDAQEHYSKYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGFTHRVEAILFCA 481

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
               + LA++    +P  A +I+ +L  + ++   +SLD+
Sbjct: 482 CYCQKLLALISYPIIPGTAWEIWRML--SPKSLKLESLDK 519


>gi|329942996|ref|ZP_08291770.1| methionyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848152|emb|CBY17153.1| methionyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|328814543|gb|EGF84533.1| methionyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 551

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 135/520 (25%), Positives = 225/520 (43%), Gaps = 38/520 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE+G  I   A+ 
Sbjct: 4   RVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAER 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +VD   +  +D  D L IS D F RTT   H D  +  +K++  KG I     
Sbjct: 64  AGMGYQEYVDMYHKIHKDTFDKLGISIDFFSRTTNPFHKDLVQDFYKELKSKGLIENQIS 123

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQH------------NPVQWMEEEGYFF 167
              YS  +  +  D          G DG   +               NP   +       
Sbjct: 124 LQLYSEEENRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLVNPRSKLSGSQLVL 183

Query: 168 RLSAYQDKLLSY-----YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + + +    L               LP   R  V  ++K  L+  +++R    WGI +PD
Sbjct: 184 KETEHAFLHLERMVDPLLAYIDTCYLPEHVRKFVTDYIK-NLRPRAITRD-LSWGIPVPD 241

Query: 223 DPQYIMYVWIDALTNYLTTTGYL-------DNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            P  + YVW DA   Y++ T          D       +     +  IGKD + FHA  +
Sbjct: 242 FPNKVFYVWFDAPIGYISGTMDWAVSLSNPDAWKDFWLEESTEYVQFIGKDNIPFHAAIF 301

Query: 276 PAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA  L  ++P  K   + S  F L +G + SKS GN +D    ++   +D LRY L    
Sbjct: 302 PAMELGQSIPYKKMDALVSSEFYLLEGYQFSKSEGNYVDIDSFLDTYSLDKLRYVLAATA 361

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILS 392
               D  +     K R N++L    GN ++R ++   K+ +  +  +     + D   L 
Sbjct: 362 PETSDSEFTFIDFKTRCNSELVGKFGNFINRVLAFAEKNGFKELAYSTDLLEDQDRKFLD 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVT 451
              +++++ +E+     + +A   ++ L +  + YF+ Q PW+L K     R   +L+  
Sbjct: 422 HAQKIVRDAQEHYSKYSLRKACCAIMELAALGNVYFNDQAPWKLLKEGFTHRVEAILFCA 481

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
               + LA++    +P  A +I+ +L  + ++   +SLD+
Sbjct: 482 CYCQKLLALISYPIIPGTAWEIWRML--SPKSLKLESLDK 519


>gi|76788744|ref|YP_327830.1| methionyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123731253|sp|Q3KMZ0|SYM_CHLTA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76167274|gb|AAX50282.1| methionyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 550

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 130/507 (25%), Positives = 211/507 (41%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                 YS  +  +  D          G D    +         E        S      
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------------WGIKI 220
           LS         L +ER  E +     G+      R                    WGI +
Sbjct: 182 LS-LRDTEHAYLHLERMKEDLLAFVQGIYLRPHIRNFVTDYIEHLRPRAVTRDLSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T       G      KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|327542457|gb|EGF28936.1| methionyl tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 679

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 126/520 (24%), Positives = 207/520 (39%), Gaps = 39/520 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +L ++ A+ Y N   HIGH  E +  D+  RF +L G   L+    D HG  I   A+ 
Sbjct: 3   RRLLVTAALPYANGPIHIGHLVEYLQTDIWVRFQKLRGNRCLYICADDTHGTAIMIRARG 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +    +++ S   +       I +D +  T  + +   C  +WK + D   + +   
Sbjct: 63  EGRSEIELIEETSEAHQRDFAGFGIEFDHYGSTNSEENRTLCHQIWKSLRDADLVVERSV 122

Query: 125 SGWYSLRDEAYYNDDEVYKGA----------DGQYYNAQHNPVQWMEEEG---------- 164
              Y    E +  D  V              D       ++P + ++             
Sbjct: 123 EQLYDPEAETFLADRFVRGTCPKCGTPNQAGDNCNCGHTYSPTELIDPVSTLSGATPIIK 182

Query: 165 ---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              + F         LS + S+   + P         F+   L+D  +SR    +G +IP
Sbjct: 183 EAEHLFVELEKLHDFLSEWVSNSGALQPETANYLKGHFLADELRDWDISRPAPYFGFEIP 242

Query: 222 DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276
           D P    YVW DA   Y+ +T  + D      A +W +D     H IGKDI  FH ++WP
Sbjct: 243 DAPGNYWYVWFDAPIGYIASTQQWCDANGEDLADWWKSDDCEVHHFIGKDITYFHTLFWP 302

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             L +A   LP KV  HGF+   G+K+SKS G  +     ++ +   ALRYF   +++  
Sbjct: 303 GMLKTAGFSLPTKVHIHGFLNVNGKKMSKSDGTFVKAETFLKHIDPSALRYFYATKLSSR 362

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D     D   ++VN+DL   + NL SR                      D  +    +
Sbjct: 363 VEDLDLGVDEFVEKVNSDLVGKVVNLASRVGKFA------SRTGLAPSYPEDGGLFQAAA 416

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVE 453
               EI    ++    +A+  ++ L    + + +  KPWE+ K     D    V  V + 
Sbjct: 417 AKGDEIASAYEDGEFSKAMRLIMELADAANPFVEHAKPWEMNKDPERQDELRDVCTVALN 476

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           + RQLA+ L   +P+LA K  D+L   +    ++     L
Sbjct: 477 LFRQLAVYLAPVLPELAKKCGDLLG--EPITSWEQSQTPL 514


>gi|270285091|ref|ZP_06194485.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289114|ref|ZP_06195416.1| methionyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336487|ref|ZP_07224689.1| methionyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 550

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/504 (24%), Positives = 213/504 (42%), Gaps = 34/504 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   A+ 
Sbjct: 5   RILITSALPYANGPLHFGHITGAYLPADVYARFQRLLGKEVLYICGSDEYGIAITLNAEL 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + DKG +     
Sbjct: 65  AGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNPHHPAIVQDFYRNLQDKGLMENLVT 124

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              YS  +E +  D  V             G          +  + +    +L+     L
Sbjct: 125 DQLYSEEEEKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKDPRSKLTGKALSL 184

Query: 177 LSYYESHPEFILPI-------------ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
                ++                          +      L+  +++R    WG+ +P  
Sbjct: 185 RETEHAYFHLERMKEELLTFVEGIYLRPHMRNFVIDYIKNLRPRAVTRD-LSWGVPVPGL 243

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD----LHVIGKDILRFHAIYWP 276
              + YVW DA   Y++ T       G      KFW  D       +GKD   FH++ +P
Sbjct: 244 ENKVFYVWFDAPIGYISGTMDWAASIGDPDAWKKFWLDDKVTYTQFVGKDNTSFHSVIFP 303

Query: 277 AFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           A  +  +LP  K   + +  F+L +G + SKS GN+ID    +E   +D LRY L     
Sbjct: 304 AMEMGQSLPYKKVDALVTSEFLLLEGFQFSKSEGNIIDMDAFLETYSLDKLRYVLAAIAP 363

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D  +     K R N+DL    GN V+R V+   K+      +     + D   ++  
Sbjct: 364 ETSDSEFAFQEFKTRCNSDLVGKFGNFVNRVVAFAAKN-GCTELSHPQLEQQDLEFIAEA 422

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVE 453
            ++ +E  ++ Q   + +A + ++ L +  + YF+ Q PW+L K +  +R  ++L+    
Sbjct: 423 QKLAKEAADHYQQYSLRKACSTIMELAALGNGYFNDQAPWKLAKEDLWNRVRSILFCACY 482

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
             + LA++    +P+ A  I+ ++
Sbjct: 483 CQKLLALISYPIMPETAWTIWGMI 506


>gi|15834921|ref|NP_296680.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|13878792|sp|Q9PL07|SYM_CHLMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7190341|gb|AAF39166.1| methionyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 550

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/504 (24%), Positives = 213/504 (42%), Gaps = 34/504 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   A+ 
Sbjct: 5   RILITSALPYANGPLHFGHITGAYLPADVYARFQRLLGKEVLYICGSDEYGIAITLNAEL 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + DKG +     
Sbjct: 65  AGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNPHHPAIVQDFYRNLQDKGLMENLVT 124

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              YS  +E +  D  V             G          +  + +    +L+     L
Sbjct: 125 DQLYSEEEEKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKDPRSKLTGKALSL 184

Query: 177 LSYYESHPEFILPI-------------ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
                ++                          +      L+  +++R    WG+ +P  
Sbjct: 185 RETEHAYFHLERMKEELLTFVEGIYLRPHMRNFVIDYIKNLRPRAVTRD-LSWGVPVPGL 243

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD----LHVIGKDILRFHAIYWP 276
              + YVW DA   Y++ T       G      KFW  D       +GKD   FH++ +P
Sbjct: 244 ENKVFYVWFDAPIGYISGTMDWAASIGDPDAWKKFWLDDKVTYTQFVGKDNTSFHSVIFP 303

Query: 277 AFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           A  +  +LP  K   + +  F+L +G + SKS GN+ID    +E   +D LRY L     
Sbjct: 304 AMEMGQSLPYKKVDALVTSEFLLLEGFQFSKSEGNIIDMDAFLETYSLDKLRYVLAAIAP 363

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D  +     K R N+DL    GN V+R V+   K+      +     + D   ++  
Sbjct: 364 ETSDSEFAFQEFKTRCNSDLVGKFGNFVNRVVAFAAKN-GCTELSHPQLEQQDLEFIAEA 422

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVE 453
            ++ +E  ++ Q   + +A + ++ L +  + YF+ Q PW+L K +  +R  ++L+    
Sbjct: 423 QKLAKEAADHYQQYSLRKACSTIMELAALGNGYFNDQAPWKLAKEDLWNRVRSILFCACY 482

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
             + LA++    +P+ A  I+ ++
Sbjct: 483 CQKLLALISYPIMPETAWTIWGMI 506


>gi|114766268|ref|ZP_01445255.1| methionyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541469|gb|EAU44514.1| methionyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 570

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 115/540 (21%), Positives = 221/540 (40%), Gaps = 49/540 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLFARYQRARGNEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A+   +S+D F R++  ++H   +     ++++G I +   
Sbjct: 63  AGKPVAEYCAEMHEVQSKIAEGFRLSFDHFGRSSSPQNHKLTQHFAGVLAERGLIREVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ--------------- 158
           +  YS  D  Y  D  +            +G        Q +PV+               
Sbjct: 123 TQMYSPTDGRYLPDRYIEGTCPNCGFEDARGDQCDNCTKQLDPVELINPRSVISGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  +   S  +D+L S+ ++   + +      +       GL+D  ++R   DWGI
Sbjct: 183 MRETKHLYLCQSQMKDQLESWIDTREGWPVLTTSIAKKWLNDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    +        + YVW DA   Y+       +        ++W  D          
Sbjct: 242 PVKKGEEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGDDWTRWWRTDKGAEDVTYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN  SR        +  ++P 
Sbjct: 362 LPADYWRWWLLSHAPESSDAEFTWENFQSSVNKDLADVLGNFASRVTKFCRSKFGEVVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E +  +++  +  ++E  E+M +  + ++   + +     + Y     PW   KT
Sbjct: 422 DGRTGEREAQLVADLTAKVREYEEHMAHAEVRKSATALRAAWVLGNEYLQDAAPWSTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +P+ A+  + + + VIR  A++ Q F+P  + ++   L   D++      +    L  G 
Sbjct: 482 DPETAAAQIRLALNVIRLYAVISQPFIPDASAQLLQALKTDDDSWPDDVPAALTSLPAGH 541


>gi|193083786|gb|ACF09469.1| methionyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-47-D6]
          Length = 551

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 130/538 (24%), Positives = 247/538 (45%), Gaps = 45/538 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N + HIGH A   + ADV  RF +  G++  +   +D+ G  I   ++ 
Sbjct: 4   KAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPILIQSEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +V   ++   +  +  +I +D F +T+   +    + ++KK+   G IY+   
Sbjct: 64  EGKTPEEYVQYWNKRDFEDFEAFNIKFDFFYKTSSSENRQFVQDVFKKLEQAGHIYENEI 123

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------------------DGQYYNAQHNPVQWM 160
              Y   D+ +  D  V                            +         PV+  
Sbjct: 124 VQLYCNTDKKFLPDRYVIGTCPYCKADDQYSDLCEKCGRVPEEIENPHCSICGQAPVKK- 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + YFF+L  + DK+  Y E +    L  + +  V +++K GL D  ++R    WGI I
Sbjct: 183 KTKHYFFKLKNFSDKISQYLEDNKN--LQKDVKKYVQNWIKEGLIDWDITRD-ISWGIPI 239

Query: 221 PDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
           P     + + Y W D    Y+++T    N +    K +  +    H IGKDI+  H ++ 
Sbjct: 240 PTGGANEKVFYGWFDNHLAYISSTIKFLNDNNKDGKKFWNESDIYHFIGKDIVYHHYLFL 299

Query: 276 PAFL--LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA    +     LP  + + G +  + +KISKS    I   + +E    D LR++L+   
Sbjct: 300 PAMRLGIEEEYKLPDYIPTRGHLTLQSKKISKSRNWYIGLKDFLEIFPADYLRFYLISIN 359

Query: 334 ACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D   +D D    ++N++L   +GNLV+R++   +K ++G +P P  F + D+    
Sbjct: 360 PYSQDDLNFDWDEFATKINSELIGNLGNLVNRALGFTIKSFNGAVPGPDEFDDMDKEAKK 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + + ++  +   M+   + RAL +++   +  ++YF  ++PW+    N    ++ ++++V
Sbjct: 420 MINELVSHLGVLMEENHLDRALKKILQFSAHFNQYFQHKEPWK----NGPGTNSCVFLSV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ-RLKPGFMLHKTFDPIF 507
             +R LAI +  F+PK + KI+  L +  +   + F  +    LK G  L  +  P+F
Sbjct: 476 NAVRSLAIAIYPFLPKSSQKIWLQLGLDGDVSAQMFDEISNITLKQGHKLG-SVSPLF 532


>gi|229916147|ref|YP_002884793.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467576|gb|ACQ69348.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 547

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 129/535 (24%), Positives = 224/535 (41%), Gaps = 41/535 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G DVL+ +G+D +G  I   A+  G
Sbjct: 3   IFIGGAWVYANGSLHLGHISSLLSGDILARYYRSKGEDVLYVSGSDCNGTPITVRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+     D+    F      L  SYD + RT   +HH+  + ++ ++  KG IYK     
Sbjct: 63  VSVTEIADRYHDEFVACYSSLGFSYDVYARTDHSQHHEVVQDIFAELYSKGFIYKKEVEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQWMEE 162
            Y    + +  D  V       +                             N       
Sbjct: 123 AYCETCDQFLPDRYVEGTCPVCHGPSRGDQCDHCSTILEPLDLLEPRCKHCLNEPSTRST 182

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRK-TFDWGIKI 220
           E ++F LS++Q  L  Y E+     L      +    +++ GL D ++SR  +    I I
Sbjct: 183 EHFYFSLSSFQKFLEKYTENADRQSLWRENAISLTKRYLQEGLHDRAVSRDLSTGVNIPI 242

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276
               +  +YVWI+A++ Y + +       G+    + ++     +V GKD + FH+I WP
Sbjct: 243 LGYEEKKVYVWIEAISGYYSASRLWAQSVGADEATFWSNTTRAYYVHGKDNIPFHSIIWP 302

Query: 277 AF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A      +  LP  + S+ ++  +  K+S S    +   +++E    D++RYFL      
Sbjct: 303 AILEALGDKALPTHIVSNEYLTLEKRKLSTSRNWAVWLPDMLERYEPDSIRYFLTINAPE 362

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +         NA+L    GN V+R++  I K +D  IP     +E    I    S
Sbjct: 363 NRDADFSWKEFIYSHNAELLGAYGNFVNRTLKFIEKSFDHSIPNDNISSE----IEERIS 418

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +  E+ + +++    +AL  +   +   ++YFD  +PW   K NP      L     +I
Sbjct: 419 NLYAEVGQLIEDTNFKQALELIFEAIRFSNKYFDQTQPWNTIKENPAECRQTLADCTFLI 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                +L+ F+P  + KI D + V  E        + LK    + +   P+F R 
Sbjct: 479 VNFGNVLRPFLPFSSQKIRDAIEVDKEG------WEVLKVKSSILQYDGPLFSRI 527


>gi|71893760|ref|YP_279206.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71851887|gb|AAZ44495.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 158/513 (30%), Positives = 272/513 (53%), Gaps = 12/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ A  
Sbjct: 3   KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ G Y
Sbjct: 63  ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +   +P
Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182

Query: 185 EFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTTT 242
           +FI   +  NE   +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL+  
Sbjct: 183 KFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242

Query: 243 GYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               + +  K   +  D    + V+GK+I RFH IYWP FL S N PLP  + +HG+++ 
Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFPLPSIILTHGWLIT 302

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   N  
Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362

Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL+SR++++I+K +D  ++        +D S        L E  +N     I +A   V
Sbjct: 363 GNLISRTIALIVKKFDQPLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFKTV 422

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           I L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I + L
Sbjct: 423 IELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILEFL 480

Query: 478 FVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
            + ++N      LD+  K  F   K   P FPR
Sbjct: 481 GINEKNFLLITKLDKFDKINFK--KLEKPFFPR 511


>gi|118594693|ref|ZP_01552040.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440471|gb|EAV47098.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 553

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 138/536 (25%), Positives = 227/536 (42%), Gaps = 50/536 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+  ++A+ Y N   H+GH  E I  D+  R+ RL G ++ +    D HG  I   A+ 
Sbjct: 2   RKIIATSALPYANGSIHLGHLVEYIQTDIWVRYQRLVGNEIHYICADDTHGTPIMLRAEK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G++ +  V+   +         +IS+D+F  T    + +    L+K +     I     
Sbjct: 62  EGISPEQLVENVHKEHSADFSDFNISFDNFYSTNSIENKNLSEALYKSLVGNNKIEAKEI 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWME------------ 161
             +Y  +   +  D  +             G   +     ++P   ++            
Sbjct: 122 EQFYDDKKNMFLPDRFIKGTCPKCKANDQYGDSCESCGTTYSPTDLIDAYSVLTGSKPVK 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E YFF+LS  +  L  + +S     L  E  N++  + K+GL D  +SR    +G +
Sbjct: 182 KKTEHYFFKLSECESFLSEWTQSDT---LQKEALNKLQEWFKAGLADWDISRDAPYFGFE 238

Query: 220 IPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           IP  P    YVW+DA   Y+ +   Y D  + S  +FW  D     +H IGKDIL FHA+
Sbjct: 239 IPGAPGKYFYVWLDAPIGYMASFKNYADKNNLSYDEFWNKDSTTELVHFIGKDILYFHAL 298

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVRE 332
           +WPA L  +    P K+++HGF+   GEK+SKS G  I     I+     D LRY+   +
Sbjct: 299 FWPATLKYSGHRTPSKIYAHGFLTVNGEKMSKSRGTFITARSYIDAFKTPDYLRYYYFSK 358

Query: 333 -IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D     D    +VN+DL   + N+ SR+   + K +D  I     F ES+  IL
Sbjct: 359 LNDSMGDIDLSLDDFIVKVNSDLIGKLVNIPSRTSGFVTKFFDNKIMLTTYFNESESQIL 418

Query: 392 SVCSRVL---QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR----- 443
              + +L    E+    + +   +    +IS V  V+ + + ++PW L K +  +     
Sbjct: 419 --VNNILLSKDEVTRLFEARQFSKICRLLISHVESVNEFVNNKEPWILAKDDAHKMKDSY 476

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
              V    ++  R L+I L   +P L  KI       +    F S+D  L     +
Sbjct: 477 LHEVCSAALQSFRLLSIYLSPIMPDLTKKIASFFNQEE----FSSIDNLLSDVTTI 528


>gi|149198175|ref|ZP_01875222.1| methionyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138777|gb|EDM27183.1| methionyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 712

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 115/542 (21%), Positives = 222/542 (40%), Gaps = 40/542 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K  I++A+ Y N +PH+G+    ++ AD  ARF R    + L+  GTDE+G      A 
Sbjct: 3   KKRLITSALPYVNNEPHLGNLIGCVLSADCFARFSRSCDYETLYICGTDEYGTATETKAA 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +   D+     + + D  +I +D F RT+   H  T + ++++++ +       
Sbjct: 63  QEGLSPREICDKYHVIHKKIYDHFNICFDAFGRTSTDIHTQTVQEIFEQVAKEDHFKVVE 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
              +YS     +  D  +            +G       A   P + ++ +         
Sbjct: 123 NEQFYSESMNKFLADRLINGTCPKCGYDDARGDQCDGCGALLTPTELIDPKCSVDKSTPV 182

Query: 167 FRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            R + +    L    S  E            P        S++K GL+  +++R    WG
Sbjct: 183 LRKTKHLHLKLPELSSDLEAWQNHSIEAGHWPNNADTTTRSWMKRGLESRAITRD-LKWG 241

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHA 272
           + +P +     + YVW DA   Y++ T              P +      + KD + FH+
Sbjct: 242 VPVPYEGFTDKVFYVWFDAPIGYVSITRGAFPDTWKYWWHDPDNTQLFQFMAKDNIPFHS 301

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +PA  +++         + S  ++ ++  K SKS    +   +VIE  + VD  R++L
Sbjct: 302 VIFPATQIASGDKWTMCHHLASTEYLNYEDTKFSKSRNIGVFGSDVIESGIDVDLWRFYL 361

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  +       +VN +  + IGNLV+RS+    K++ G I    A TE+   
Sbjct: 362 LAIRPEKQDSAFTWQEFFDKVNNEFLDNIGNLVNRSLVYANKNFSGPIELCEA-TETQTE 420

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVL 448
             +    +++EI +  +      A+   + L    +++F  ++PW   K   D    + +
Sbjct: 421 FKNKAQELIKEITQAYEACSFREAIRLTLILGKLGNKFFQDEEPWVKIKEGKDEEVRSAI 480

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + V ++R ++ILL   +P  ANKI   + + D    +  L                +FP
Sbjct: 481 NILVHLVRDISILLSPAMPNTANKIQSFIGLKD--LKWNQLGDFSSLVDQEVTKPSILFP 538

Query: 509 RF 510
           + 
Sbjct: 539 KL 540


>gi|296435548|gb|ADH17722.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437408|gb|ADH19569.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297139907|gb|ADH96665.1| methionyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 550

 Score =  295 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 127/507 (25%), Positives = 217/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKELRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T       G      KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|46204985|ref|ZP_00049208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 348

 Score =  295 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 193/316 (61%), Positives = 238/316 (75%), Gaps = 2/316 (0%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I+TAI+YPN  PHIGHAYE+I  D +ARFHRLDG DVLFTTGTDEHG KI + 
Sbjct: 6   KANEPFLITTAISYPNGAPHIGHAYEVIATDAIARFHRLDGRDVLFTTGTDEHGLKIQQT 65

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  AGVT + FVD  +  F+ +AD LD +YD FIRTTE  H+   + LW+++   GDIY 
Sbjct: 66  AARAGVTPRAFVDDMAGRFKAVADRLDCAYDRFIRTTEADHYAAAQELWRRMEANGDIYL 125

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             Y+GWYS+RDEAYY++ E   G DG   + +   PV+WMEEE + FRLS YQD+LL  Y
Sbjct: 126 AKYAGWYSVRDEAYYDEAETVLGPDGNRRSIKTDTPVEWMEEENFLFRLSKYQDRLLKLY 185

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P F+ P  R NEV SFV+SGLKDLS+SR TFDWG+ +PD P ++MYVW+DALTNYLT
Sbjct: 186 EEQPGFLAPETRMNEVASFVRSGLKDLSISRTTFDWGVPVPDRPGHVMYVWVDALTNYLT 245

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            TG+ D  D + A+FWPA LHVIGKDI+RFHA+YWPAFL+SA LPLPK+VF HGF L +G
Sbjct: 246 VTGFPDAADPN-ARFWPASLHVIGKDIVRFHAVYWPAFLMSAGLPLPKRVFGHGFFLSRG 304

Query: 301 EKISKSLGNVIDPIEV 316
           EK+SKSLGNV+DP+++
Sbjct: 305 EKMSKSLGNVVDPLDL 320


>gi|255506604|ref|ZP_05382243.1| methionyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 550

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 217/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T           +  KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|289525077|emb|CBJ14547.1| methionyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434617|gb|ADH16795.1| methionyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 550

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 217/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNAYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T           +  KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|254568272|ref|XP_002491246.1| Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA
           synthetase (Gus1p) and Arc1p [Pichia pastoris GS115]
 gi|238031043|emb|CAY68966.1| Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA
           synthetase (Gus1p) and Arc1p [Pichia pastoris GS115]
 gi|328352235|emb|CCA38634.1| methionyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 744

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/545 (19%), Positives = 211/545 (38%), Gaps = 41/545 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ ARF +    + LF  GTDE+G      
Sbjct: 186 NERNILITSALPYVNNVPHLGNIVGSVLSADIYARFCKARNYNTLFICGTDEYGTATETK 245

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A    VT +    +  +   D+     I +D F RTT +   +  + ++ K+ + G + +
Sbjct: 246 ALEENVTPRELCTKYHKIHSDVYKWFQIGFDYFGRTTTELQTEIAQDIFMKLYNNGYLEE 305

Query: 122 GCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--A 171
                 Y      +  D           Y+ A G   +     +   E      +L   +
Sbjct: 306 QSMRQLYCPVHNGFLADRYVEGECPKCHYEDARGDQCDKCGTLLDPFELINPRCKLDNAS 365

Query: 172 YQDKLLSYYESHPEFILPIERRN----------------EVISFVKSGLKDLSLSRKTFD 215
            + K   +     + + P  R                     S++K GL    ++R    
Sbjct: 366 PEPKNSDHIFLSLDKLEPPLREWVAKASEEGKWSKNSRTITDSWIKEGLLPRCITRDLV- 424

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  +P D   + ++YVW DA   Y++ T           K  P  +     +GKD + F
Sbjct: 425 WGTPVPLDGFEKKVLYVWFDATIGYISITANYTKHWKEWWKN-PDHVDLYQFMGKDNVPF 483

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +PA  +           + +  ++ ++G K SKS G  +      +  +     RY
Sbjct: 484 HTVVFPASEIGTGDKWTMLHHLSTTEYLQYEGGKFSKSRGIGVFGNNAQDSGIPPSVWRY 543

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ES 386
           +L        D  +       + N +L   +GN V+R    +   Y+G++P       E+
Sbjct: 544 YLASIRPESSDSQFSWGEFVSKNNNELLANLGNFVNRLTKFVNAKYNGVVPDYDVSNCEN 603

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            E ++   + +L++   +++   + + L   + L +  +++    K    L    P ++ 
Sbjct: 604 YEVLVRDVNAILKQYLIDLEGVHLRKGLEVAMQLSARGNQFLQDNKLDNSLYNDKPAKSD 663

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V+ + + +I  +  ++  ++P+   +I  IL  A   R        +K G  ++K    
Sbjct: 664 AVVAIGLNLIYLVGSVIYPYMPETTTQINQILNTAS-LRIPDEFGLFIKAGHCINKA-QY 721

Query: 506 IFPRF 510
           +F R 
Sbjct: 722 LFKRI 726


>gi|166154253|ref|YP_001654371.1| methionyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155128|ref|YP_001653383.1| methionyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335502|ref|ZP_07223746.1| methionyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|229470712|sp|B0B9D9|SYM_CHLT2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229470713|sp|B0BB18|SYM_CHLTB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|165930241|emb|CAP03726.1| methionyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931116|emb|CAP06680.1| methionyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 550

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 127/507 (25%), Positives = 217/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNAYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T       G      KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|254294466|ref|YP_003060489.1| methionyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042997|gb|ACT59792.1| methionyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 570

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 124/556 (22%), Positives = 233/556 (41%), Gaps = 55/556 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF RL G DVL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFKRLKGDDVLYVCATDEHGTPAELAASA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++ + + D+     R   +   +S+D F R++ +++    +   +K+   G I +   
Sbjct: 63  AGISVQEYCDEQHEIQRAAGEGFGLSFDWFGRSSREQNAKLTQHFAEKLEANGLIEERTS 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE---------- 163
              YS+ D  +  D  V            +G          +PV  +E            
Sbjct: 123 KQVYSVDDGRFLPDRYVEGTCPHCEFEKARGDQCDNCGRLLDPVDLIEPYSAVSGSKNIE 182

Query: 164 -----GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                  F      QD + ++ +    +  P   R+    ++  GL+D +++R    WG+
Sbjct: 183 IRDTVHLFLLQEKMQDTIRAWVDEAETW--PQLARSIAYKWLDEGLQDRAITRD-LKWGV 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +  D          + YVW DA   Y+  T        +     +W  D        + 
Sbjct: 240 PVLKDGKPRPGFEDKVFYVWFDAPVEYIAATQEWAEAGDNRDWESWWRTDKGADDVSYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +P  +  +  P     K+ +  ++   G K S S    +   + +  
Sbjct: 300 FMGKDNVAFHTVSFPVTIFGSQEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVFMDQALGI 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+     G D  +  +G +  +N+DLAN +GN V+R     +  +DG++P 
Sbjct: 360 LPSDYWRWYLIANAPEGSDAPFTWEGFQSAINSDLANVLGNFVNRITKYTVSKFDGVLPD 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G   E +  +       L  +  + +N    +A A+  ++ +  + Y    +PW   KT
Sbjct: 420 GGVAGEDEAWLEGELKTRLPILMSHYENMEFRKAAAETRAIWAVGNEYLTKAEPWVKFKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ-----SLDQRLK 494
           + D A+  +   + ++    IL    +P+   KI D + + +E+R F+     ++   L 
Sbjct: 480 DKDAAAVGVRYGLNLVALFGILALPIIPETGKKILDAIGIPEEHRSFKFDDVAAVLTALP 539

Query: 495 PGFMLHKTFDPIFPRF 510
            G  + K  + +F + 
Sbjct: 540 IGMPV-KAPEVLFSKI 554


>gi|42526573|ref|NP_971671.1| methionyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|68565989|sp|Q73NT9|SYM_TREDE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|41816766|gb|AAS11552.1| methionyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 793

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 115/564 (20%), Positives = 220/564 (39%), Gaps = 63/564 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +++A+ Y N  PH+G+  +++ ADV ARF RL   + L+  GTDE+G      A  
Sbjct: 2   KRKLVTSALPYVNNFPHLGNLIQVLSADVFARFCRLKEYETLYICGTDEYGTATETKALE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + +           ++ +  +I++D F RT+  +  +  + ++  +   G I +   
Sbjct: 62  EKKSPEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTI 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
              Y    + +  D  V            +G   ++     +P    E            
Sbjct: 122 EQLYCPSCKRFLADRYVLGTCPSCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGAAPEV 181

Query: 168 RLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKDLSLSR---KTFDWGIK 219
           R + +    L       E  +P         N  +   KS L+D    R   +   WGI 
Sbjct: 182 RSTTHLYINLPKIVPEYEKWMPKTAEEGRWSNNALQMSKSWLRDGLQERAITRDLKWGIP 241

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
           +P       + YVW DA   Y++ T    +  G   K W  D         IGKD + FH
Sbjct: 242 VPKKGFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFH 301

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
            + +P  L+ +     K   +    ++ ++  K SKS G  +   +  E  +  D  R++
Sbjct: 302 TVIFPCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFY 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           +        D  +     ++RVN++L   + NLV+R+ + I + YDG IP         E
Sbjct: 362 IFYNRPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFIHRYYDGKIPQVDGAKSGRE 421

Query: 389 SILSVCSRV-------LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            I S+   +        ++I E      +  +  +  +L S  ++ F   +PW+ ++T+P
Sbjct: 422 DIKSMVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRRETDP 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVP--------KLANKIFD---------ILFVADENR 484
           + A  ++     +I+ + IL+  ++P            KI+               + + 
Sbjct: 482 EYAEALMSELCYLIKDILILIHPYMPQYADQAAGFFGQKIWSGNIFDGKAPQFNKPEGSF 541

Query: 485 -CFQSLDQRLKPGFMLHKTFDPIF 507
             +++L +R   G    +    IF
Sbjct: 542 LSWKNLGER--EGLKTVENPVIIF 563


>gi|15604750|ref|NP_219534.1| methionyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|7388280|sp|O84035|SYM_CHLTR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3328422|gb|AAC67622.1| Methionyl-tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748163|gb|ADI50709.1| Methionyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749043|gb|ADI51721.1| Methionyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 550

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 127/507 (25%), Positives = 216/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T       G      KFW  D       IGKD   FHA 
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWKKFWLDDTVTYAQFIGKDNTSFHAA 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|238749949|ref|ZP_04611453.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711878|gb|EEQ04092.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 635

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 122/506 (24%), Positives = 211/506 (41%), Gaps = 47/506 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
             + +   +++ ++   G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSSLIYGRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCE 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P +                E E +FF L A+ D L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVLRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SK 252
           ++  + +SGL+   +SR    +G +IPD P    YVW+DA   Y+     L +       
Sbjct: 178 KMQEWFESGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRDDLDF 237

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +FW         H IGKDI+ FH+++WPA L  +    P  +F HG++   G K+SKS 
Sbjct: 238 DEFWREGSTTDLYHFIGKDIVYFHSLFWPAMLEGSQFRKPTNLFVHGYVTVNGAKMSKSR 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  I     ++ +  D LRY+   +++    D   + +   +RVNAD+ N + NL SR+ 
Sbjct: 298 GTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNA 357

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K +DG +        +D  +    +     I +   N+   +A+ ++++L    +R
Sbjct: 358 GFISKRFDGKLADQ----LADPELYKTFTDAAVSIADAYSNRESSKAIREIMALADIANR 413

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D Q PW + K          +  + + + R L   L+  +P L  +    L       
Sbjct: 414 YVDEQAPWVVAKAEGRDADLQAICSMGINLFRVLMTYLKPVLPALTERTEAFLNTE---L 470

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + S++Q L     ++ TF  +F R 
Sbjct: 471 TWDSIEQPLLS-HQIN-TFKALFNRI 494


>gi|325473110|gb|EGC76306.1| methionyl-tRNA synthetase [Treponema denticola F0402]
          Length = 792

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 109/522 (20%), Positives = 208/522 (39%), Gaps = 51/522 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +++A+ Y N  PH+G+  +++ ADV ARF RL   + L+  GTDE+G      A  
Sbjct: 2   KRKLVTSALPYVNNFPHLGNLIQVLSADVFARFCRLKEYETLYICGTDEYGTATETKALE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
              + +           ++ +  +I++D F RT+  +  +  + ++  +   G I +   
Sbjct: 62  EKKSPEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTI 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
              Y    + +  D  V            +G   ++     +P    E            
Sbjct: 122 EQLYCPSCKRFLADRYVLGTCPSCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGASPEV 181

Query: 168 RLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKDLSLSR---KTFDWGIK 219
           R + +    L       E  +P         N  +   KS L+D    R   +   WGI 
Sbjct: 182 RSTTHLYINLPKIVPEYEKWMPKTAEDGRWSNNALQMSKSWLRDGLQERAITRDLKWGIP 241

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFH 271
           +P       + YVW DA   Y++ T    +  G   K W  D         IGKD + FH
Sbjct: 242 VPKKGFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFH 301

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
            + +P  L+ +     K   +    ++ ++  K SKS G  +   +  E  +  D  R++
Sbjct: 302 TVIFPCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFY 361

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           +        D  +     ++RVN++L   + NLV+R+ + + + YDG IP         E
Sbjct: 362 IFYNRPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFVHRYYDGKIPQVDGAKSGRE 421

Query: 389 SILSVCSRV-------LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            I S+   +        ++I E      +  +  +  +L S  ++ F   +PW+ ++T+P
Sbjct: 422 DIKSMVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRRETDP 481

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVP--------KLANKIFD 475
           + A  ++     +I+ + IL+  ++P            KI+ 
Sbjct: 482 EYAEALMAELCYLIKDILILIHPYMPQYADQAAGFFGQKIWS 523


>gi|322369925|ref|ZP_08044487.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550261|gb|EFW91913.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 692

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 118/513 (23%), Positives = 216/513 (42%), Gaps = 48/513 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++  + Y N + HIGH    +  DV +R     G    F +G+D HG  +A  A+ 
Sbjct: 10  EPAVVTCGLPYANGELHIGHLRTYVGGDVYSRALETLGQQTAFVSGSDMHGTPVAVNAEK 69

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ + F  ++   +       DI +D++  T ++ + +  + + +K+ ++G IY+   
Sbjct: 70  EGVSPREFALRHHDKYEATFPKFDIEFDNYGHTDDETNTELTQEIVRKLDEEGYIYEKEI 129

Query: 125 SGWYSLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQW 159
              +   ++    D  V            G   +                     NP ++
Sbjct: 130 KVAWDPIEDDPLPDRYVEGTCPYCGAHARGDECDEGCGRHLEPGEIEDPTSIRTGNPAEY 189

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E    FFR+S  Q+ L  +             +N+   +++  L+D  +SR   DWGI 
Sbjct: 190 RERTHKFFRVSELQEYLQGFI---DRLEGTSNAKNQPREWIEGELQDWCISRD-MDWGID 245

Query: 220 IPDD------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKD 266
            P D         ++YVW+DA   Y+ +T       G+    W          +H+IG+D
Sbjct: 246 YPGDEGDEASEDLVLYVWVDAPIEYIASTKQYTERVGADTYDWEEPWKDAGEIVHIIGRD 305

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           I++ H ++WPA L  A    P+ V + GF+   G+  S S    +   + ++E    D L
Sbjct: 306 IIQHHTVFWPAMLHVAEYNEPRAVMASGFVNLNGKGFSTSRNRAVWADDYLDEGFAPDLL 365

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L       +D  +  D  ++RVN +L   +GN V RS+    ++YDG      +   
Sbjct: 366 RYYLATNGGFQQDVDFSWDRFQERVNGELVGTVGNFVYRSLLFAARNYDGAPDAETS--- 422

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
             + +       + E    + +  I        +L +  + Y    +PW+L   +P+RA 
Sbjct: 423 --DEVRERIEDAIDEFTAAVNDYSIKDLGDAATALAAFGNEYIQRNEPWKLTDEDPERAE 480

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V+Y  V++ + LA+L +  +P  A  ++  L 
Sbjct: 481 QVIYDCVQLSKALAVLFEPILPGKAETLWAQLG 513


>gi|89055636|ref|YP_511087.1| methionyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|123401013|sp|Q28MK0|SYM_JANSC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|88865185|gb|ABD56062.1| methionyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 570

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 120/560 (21%), Positives = 218/560 (38%), Gaps = 57/560 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M    +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG    
Sbjct: 1   MSTTSRTLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGQEVLFLCATDEHGTPAE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
            AA  AG     +         ++A    +S+D F R++  ++H   +    K++D G I
Sbjct: 61  LAAAKAGKPVAEYCADMHAVQAEIARGFRLSFDHFGRSSSPQNHALTQHFAGKLADAGLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV----------------- 157
            +      YS  D  +  D          G D    +   N                   
Sbjct: 121 AEVEEKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISG 180

Query: 158 ----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               +  E +  + R S  + +L  +  S  ++ +      +       GL+D  ++R  
Sbjct: 181 STDLEVRETKHLYLRQSQLRGQLSDWISSKTDWPILTTSIAKKWLNDGDGLQDRGITRD- 239

Query: 214 FDWGIKIPDD-------PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD----- 259
            DWG+ +             + YVW DA   Y+                ++W  D     
Sbjct: 240 LDWGVPVKRGDADWPGMEGKVFYVWFDAPIEYIACAAEAVEEGSISDWERWWRVDKGADD 299

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPI 314
              +  +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   
Sbjct: 300 VRYVQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMD 359

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        + 
Sbjct: 360 QALEILPSDYWRWWLLSHAPETSDAEFTWEAFQQDVNKDLADVLGNFVSRITKFCRSKFG 419

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
            ++P  G +   + ++++   + L   + +M    I +A A++ ++    + Y  +  PW
Sbjct: 420 EVVPEGGDYGPQETALIADLDKRLAAYQTHMDAIDIRKAAAELRAIWVAGNEYLQSAAPW 479

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLD 490
              KT+PDRA+ +    + +I   A L   F+P  A  + +     L    + R      
Sbjct: 480 TAFKTDPDRAAAITRFALNLIPFYAGLSAPFIPDAAQAMAEGMHTNLTWPKDARL----- 534

Query: 491 QRLKPGFMLHKTFDPIFPRF 510
             L  G       D +F + 
Sbjct: 535 TTLPAGHAFT-VPDVLFAKI 553


>gi|315499719|ref|YP_004088522.1| methionyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417731|gb|ADU14371.1| methionyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 572

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 123/555 (22%), Positives = 227/555 (40%), Gaps = 53/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G +VL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFMRARGHEVLYICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   K + D+     +   +   +SYD F R++ + +    +   + +   G I +   
Sbjct: 63  AGQDVKTYCDEQHLIQKTAGEAFGLSYDWFGRSSSEENRHLTQAFCEALDRNGLIEERTD 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS+ D  +  D  V            +G          +P                +
Sbjct: 123 KMVYSIDDGRFLPDRYVEGTCPHCKFEKARGDQCDNCGRLLDPTDLINPYSAVSGSRNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  +   +  + +L ++ ES  ++  P   ++  +  +  GL D  ++R    WG+
Sbjct: 183 VRDTKHLYLLQTKVEPQLRAWIESKTQW--PQLAKSIAMKHLDEGLIDRGITRD-LKWGV 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------L 260
            I  D          + YVW DA   Y+  T    N  G+      +W  D        +
Sbjct: 240 PITKDGKPRDGFENKVFYVWFDAPVEYIGATQEYFNAKGNADGWQSWWRLDQGAVDVTYV 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA ++ +N P      + +  ++   G K S S+   +   + +E
Sbjct: 300 QFMGKDNVAFHTVSFPATIIGSNEPWKMVDTLKAFNWLNWYGGKFSTSMNRGVFMDQALE 359

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+ +   G D  +  +  +  VN DLA+ +GN  +R +      + G++P
Sbjct: 360 LLPADYWRWYLISQSPEGSDSSFTWEQFQSAVNKDLADVLGNFANRILKFTESKFGGVVP 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G     ++ + +  S +L E  E  +   + +A   V  +    + Y     PW   K
Sbjct: 420 EGGEAGPQEQKLYADLSALLAEATEAFEAMEMRKAAQAVRRIWVLGNEYLQEAAPWTAFK 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA---DENRCFQSLDQRLKP 495
           T+ +RA  ++   + ++R  A+L Q   P  A  I D + V    D        +    P
Sbjct: 480 TDVERAGVIVRHGLNLVRLYAVLAQPLTPFAAQSIADCVGVELPLDWPTTDAQAELSKLP 539

Query: 496 GFMLHKTFDPIFPRF 510
           G    K+ + +F + 
Sbjct: 540 GGAAVKSGEVLFKKI 554


>gi|170595342|ref|XP_001902341.1| methionyl-tRNA synthetase [Brugia malayi]
 gi|158590031|gb|EDP28810.1| methionyl-tRNA synthetase, putative [Brugia malayi]
          Length = 468

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 158/442 (35%), Positives = 232/442 (52%), Gaps = 16/442 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-----FTTGTDEHGQKIAK 60
           K +I+T I Y N  PHIGH Y  ++ADV  R+  L G DV      FTTGTDEHG KI +
Sbjct: 22  KHFITTPIFYANGPPHIGHLYTALLADVSNRWKLLKGGDVDLNNSLFTTGTDEHGLKIQQ 81

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG   + + D  S  F+D+     I  +DFIRTTE RH +  + +WK++  +G I 
Sbjct: 82  TATTAGCDPQRYCDDISDKFKDLFRAFGIQPNDFIRTTETRHKEVVKHVWKELDKRGLIQ 141

Query: 121 KGCYSGWYSLRDEAYYNDDEVY--KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +G + GWYS  DE +Y +DEV    G       +  + V+W++EE Y F L  Y   + +
Sbjct: 142 RGKHEGWYSTVDECFYANDEVEKLDGQTSAVSKSTGSVVEWVQEENYIFPLFKYLGAVRN 201

Query: 179 YYESHPEFILPIERRNEVISFVKSGLK-DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +  S+ + I P     E +          LS  RK   WGI +P+D    +YVW DAL N
Sbjct: 202 WL-SNCDVIRPKVYFPEALQHASVERDLSLSRDRKRVTWGIAVPNDESQTIYVWFDALVN 260

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT +G        K+  WP    ++GKDIL+FHA+ WPAFLL+ +LPLPK++F H   L
Sbjct: 261 YLTVSG---VFSNKKSSIWPPTCQIVGKDILKFHAVIWPAFLLALDLPLPKRIFVHSHWL 317

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKS+GNV+DP    + +  + LRYFL+R+     D  +        VN DL N 
Sbjct: 318 VDGVKMSKSIGNVVDPFTASKSLSEEGLRYFLLRQGTPQNDANFTMLKAVNVVNTDLINN 377

Query: 358 IGNLVSRSVSMILK----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +GNL+ RS    L            +     E  E ++   + + +   E     +I++A
Sbjct: 378 VGNLLQRSTIGKLNPSQTYPAFHSDSFRNLLELGEPLIESINCLTEVYEEQFDELMIYKA 437

Query: 414 LAQVISLVSEVDRYFDAQKPWE 435
           L  ++ ++ + + +F   +PW+
Sbjct: 438 LELLMDVMRQTNGFFQFYEPWK 459


>gi|294676114|ref|YP_003576729.1| methionyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474934|gb|ADE84322.1| methionyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 569

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 125/552 (22%), Positives = 225/552 (40%), Gaps = 49/552 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A    +S+D F R++  ++    +   K ++D+G I +   
Sbjct: 63  AGKPVADYCAEMHDVQAAIAGGFRLSFDHFGRSSSPQNRALTQHFAKALADQGLIREVTE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS+ D  +  D  +            +G        Q +PV               +
Sbjct: 123 KQMYSVTDGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPRSVISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F R SA +DKL ++ +S  ++ +      +   F   GL+D  ++R    WG+
Sbjct: 183 MRETKHLFLRQSAMKDKLAAWIDSKTDWPVLSTSIAKKWLFDGEGLQDRGITRD-LSWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD--------LHV 262
               D          + YVW DA   Y+  T  + +   G  A++W  D           
Sbjct: 242 PAQFDGAPWAGMEGKVFYVWFDAPIEYIAGTQEWAEKTGGDWARWWRLDQGAEDVTYTQF 301

Query: 263 IGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +P+ +L +  P      + S  ++ + G + S S G  +   + +  +
Sbjct: 302 MGKDNVPFHTLSFPSTILGSAEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALGIL 361

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +P  
Sbjct: 362 PSDYWRWWLLSHAPESADAEFTWENFQASVNKDLADVLGNLVSRVTKFCNSKFGTEMPAT 421

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
              TE + ++++     L    + M    + RA  ++ +L    + Y  A  PW + KT+
Sbjct: 422 VVLTERETALMAQFRDGLAAYEKAMDEIHVRRAAEELRALWVLGNEYLQAAAPWSVVKTD 481

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGFM 498
              A  ++   + +IR  A+L + F+P  A  I   L   D        +  + L  G  
Sbjct: 482 EAAARGIIAFALNLIRLYAVLSRPFIPDAAQAIMTALNCDDWTWPEDLDAAIRSLPEGHA 541

Query: 499 LHKTFDPIFPRF 510
                + +F + 
Sbjct: 542 F-AVPENLFRKI 552


>gi|148244673|ref|YP_001219367.1| methionyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|187651803|sp|A5CWL9|SYM_VESOH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146326500|dbj|BAF61643.1| methionyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 545

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 123/544 (22%), Positives = 238/544 (43%), Gaps = 46/544 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K+ +++A+ Y N + H+GH  E I  D+  RF ++ G +  +    D HG  I  
Sbjct: 1   MTSR-KILVTSALPYANGEIHLGHLLEYIQTDIWVRFQKMMGNECHYVCADDAHGTAIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +T +V +   S   +       I +  +  T  + + D    ++ K++  G I 
Sbjct: 60  KADELDITPEVLIKNMSNKHQIDFQSFSIDFSQYHSTHSQENKDISTNIYNKLNVAGFIK 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
               S  +    + +  D  +             G + +   A ++ ++           
Sbjct: 120 TRVISQAFDPLKQMFLADRFIKGDCPKCGSNEQYGDNCEVCGATYSSIELKNAKSVISGV 179

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E YFF L  ++ +L  + ++     L     N++  + K GL+   +SR    
Sbjct: 180 TPITKDSEHYFFDLPQFEVQLKEWTKAG---HLQDAISNKLSEWFKEGLQQWDISRDAPY 236

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IP       YVW+DA   Y+ +     D  +    +++  D      H IGKDI+ 
Sbjct: 237 FGFQIPAVEGKYFYVWLDAPIGYMASFKKLCDEQNIDFNEYFNKDSNTELYHFIGKDIIY 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L+ +N   P  +F+HGF+   G+K+SKS G  I     +  +  + LRY+ 
Sbjct: 297 FHALFWPAMLIGSNYRTPSAIFAHGFLTINGQKMSKSRGTFIQARTYLNYLNPEYLRYYY 356

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +++    D   +    K+R+N+DL   + N+ SRS   I+K ++  + +    ++  +
Sbjct: 357 AYKLSSKIDDIDLNLIDFKQRINSDLVGKVVNIASRSAGFIVKKFNKTLSSYTIESKFYQ 416

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRAST 446
                       I ++ + +  ++A+  +I L ++ ++Y D  KPW+L K      +   
Sbjct: 417 EFFD----CGDIIAKHYEARNYNQAMRVIIKLANKANQYIDKHKPWQLIKKPNQQTQVHD 472

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V  + + + R L   L+  +P +A ++   L + + +  +Q L   L     ++ TF P+
Sbjct: 473 VTSLAINLFRVLMTYLKPVLPIMAKQVEKFLNIDELH--WQDLKYPL-IKHQIN-TFKPL 528

Query: 507 FPRF 510
             R 
Sbjct: 529 MLRI 532


>gi|67526815|ref|XP_661469.1| hypothetical protein AN3865.2 [Aspergillus nidulans FGSC A4]
 gi|40739940|gb|EAA59130.1| hypothetical protein AN3865.2 [Aspergillus nidulans FGSC A4]
          Length = 528

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 162/519 (31%), Positives = 236/519 (45%), Gaps = 64/519 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAAQ 63
           +  Y++T I Y NA PH+GH Y M++AD+L R+  L G  +    TGTDEHG K      
Sbjct: 53  KPYYVTTPIFYVNAAPHVGHLYTMVLADILKRWRTLTGDNEAQLLTGTDEHGMKGLLGEI 112

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
                                                          + +  +G IY   
Sbjct: 113 -----------------------------------------VTYAEQEMLQHRGYIYTSK 131

Query: 124 YSGWYSLRDEAYYNDDEVY------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           + GWYS+ DE +Y   +V        G            V+W  E  Y FRLSA+QD+LL
Sbjct: 132 HEGWYSVSDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLL 191

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDAL 235
             Y    +FI P     +V+  V SGL DLS+SR      WGI +P+D    +YVW+DAL
Sbjct: 192 ELY--KTDFITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDAL 249

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
            NYLT  GY   P       WPAD+HV+GKDI+RFH +YWPAFL++ +LPLP+ V  H  
Sbjct: 250 VNYLTKAGYPFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALDLPLPRNVLVHAH 309

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                EK+SKS GNV++P   I+  G+D +R+FL        D  YD   + +     L 
Sbjct: 310 WTMNREKMSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQ 369

Query: 356 NGIGNLVSRSV----SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            G+GN+  R++      +              T  D++      ++  ++ + M+     
Sbjct: 370 QGLGNIAHRTIGCAKGKLRDYIINATSGNSPATADDQAYQKTLEQLSHKVAKCMEALDPR 429

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            AL +++ ++   ++YF   +PW     NP+    V++   E +R + ILLQ F+P  A 
Sbjct: 430 AALEEIVEVILLTNKYFHNSEPW----QNPEEKQRVIFNAAESMRIMGILLQPFMPNKAK 485

Query: 472 KIFDILFVADENRCFQSLDQRLKP--GFMLHKTFDPIFP 508
           K+ DIL V    R             G  + K    +FP
Sbjct: 486 KLLDILKVDPSKRDLSDAGYARDSTYGEDVKKKI--LFP 522


>gi|315605052|ref|ZP_07880105.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313239|gb|EFU61303.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 613

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 142/537 (26%), Positives = 231/537 (43%), Gaps = 53/537 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA +
Sbjct: 3   RILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADS 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGV+ +   DQN+R   +    L +SYD F RTT   H+   + ++  + D G + +   
Sbjct: 63  AGVSARELADQNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQVT 122

Query: 125 S-----------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------W 159
                           +         E  +G        Q +P +              +
Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDNCGNQMDPTELINPHSRINGETPQF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E   YF  L A    L  + +   +         +        ++  +++R   DWGI 
Sbjct: 183 VESTHYFLDLPALAQALSDWLDEREKSGTWRPNVIKFSKNFLGDIRPRAMTRD-IDWGIP 241

Query: 220 IP---DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
           +P   D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + 
Sbjct: 242 VPGWEDQPTKRLYVWFDAVIGYLSASIEWARRSGDPEAWRRWWNDPEALSYYFMGKDNIV 301

Query: 270 FHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYNGQGAKGGKPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVRD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +  
Sbjct: 362 FLERYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASMIAKKFGQ 421

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           + PTPG   E D ++L         +   +++     AL++ + LV E ++Y    +P++
Sbjct: 422 I-PTPGELEEIDRALLDAVEAGFATVGNLIRHHRQKAALSEAMRLVGEANKYVTDTEPFK 480

Query: 436 LKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           LK     +R +TVL+   +V+  L ++L  F+P  AN +  ++           +++
Sbjct: 481 LKAPEQRERLATVLWTLAQVVADLNLMLSPFLPHAANDVDRVMGGEGRIAPMPRIEE 537


>gi|166157037|emb|CAO79494.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [uncultured candidate division WWE3 bacterium
           EJ0ADIGA11YD11]
          Length = 471

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 161/476 (33%), Positives = 259/476 (54%), Gaps = 25/476 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIAKA 61
           ++K+ I+TAI Y N   HIGHAY+ I+AD +ARF R+     +V F TGTDEHGQK+   
Sbjct: 2   KKKILITTAIDYVNDVIHIGHAYQKILADCVARFERIRRGSENVFFVTGTDEHGQKVYNV 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  GV  K FVD+ S+  ++  D + ISYD FIRTT+  H  T    ++K+ + G IYK
Sbjct: 62  AKERGVDVKEFVDEISKKDQEQQDSIQISYDRFIRTTDGDHKKTAEDFFRKVYNAGYIYK 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G Y    E+Y  + ++    +G+        +Q +EEE YFF+ S+++D L + YE
Sbjct: 122 DNYKGLYCEGCESYKTEKDLI---NGRCALHPGLEIQVVEEENYFFKFSSFKDFLRTLYE 178

Query: 182 SHPEFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
            +P+F+LP  R  E+ +F+ +     ++  ++   WGI+ P D  ++++VW DAL NYLT
Sbjct: 179 KNPDFVLPNSRYREMYAFIDTIEDIPITRRKEKLPWGIECPIDKNHVIWVWFDALINYLT 238

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
               +++ D          +H +GKD  R HA+ WP  L +A   +P  V+ + F+   G
Sbjct: 239 FGLQVNSWDEDTEI-----VHFLGKDNARMHALLWPCMLKAAGYSMPTHVYVNAFLSMNG 293

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +KISKSLGN++ P +++E  G D +RY+ +R     +D  + +   ++  NADLANG+GN
Sbjct: 294 KKISKSLGNIVAPKDLVERYGADPVRYYFLRYGPIIEDSDFSESHFQEVYNADLANGLGN 353

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V+R   +  K       +  + T   E           E+ +      +  AL ++ S 
Sbjct: 354 TVARLAKLAEK-------SDFSLTAEKEK-----KDTFLELSQYFDEFRVDLALQKIWSK 401

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ +D++ +   PW +K  N D+   VL   +  +  +A L + FVP  + KI  I
Sbjct: 402 LANLDKHINENAPWSIK--NNDKLKEVLEYEIGELCNIAELCKPFVPGTSEKILKI 455


>gi|227832672|ref|YP_002834379.1| Methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453688|gb|ACP32441.1| Methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 617

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 147/525 (28%), Positives = 225/525 (42%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G DVL  +GTDEHG  +   A 
Sbjct: 10  ETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQAD 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R        L +SYD F RTT + H+   + L+K + + G + K  
Sbjct: 70  KEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIKET 129

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYF 166
             G  S          Y        GADG   +   N            PV  +  E   
Sbjct: 130 TQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGETPK 189

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L   +   E  L   R +   + +K  L  L   R        DWGI IP
Sbjct: 190 FIDTEHFLLDLPAVKDVLEEWL-KTREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPIP 248

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA----DLHVIGKDILR 269
            +         +YVW DA+  Y        +      +   +W        +  GKD + 
Sbjct: 249 VEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWKDYWQNPQARHYYFQGKDNIT 308

Query: 270 FHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA                    L LP ++ S  ++   G K S S G VI   +
Sbjct: 309 FHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGVVIYVKD 368

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 369 FLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAHKNFG- 427

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A  ++D+ IL++         E ++     +A+  ++ +V E + Y  A +PW+
Sbjct: 428 EVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVAAMEPWK 487

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+    ++L  F+P  A K+ + L 
Sbjct: 488 LAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETLG 532


>gi|167044646|gb|ABZ09318.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG7F19]
          Length = 551

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 133/539 (24%), Positives = 246/539 (45%), Gaps = 47/539 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N + HIGH A   + ADV  RF +  G++  +   +D+ G  I   ++ 
Sbjct: 4   KAIITSALPYANGEIHIGHVASTYLPADVTTRFLKQKGVEAYYICASDDFGTPILIQSEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T + +V+  ++   +     +I +D F +T+   +    + ++KK+   G IY+   
Sbjct: 64  EGKTPEEYVEYWNKRDFEDFVAFNIKFDFFYKTSSPENRQFVQDVFKKLEQAGHIYQNEI 123

Query: 125 SGWYSLRDEAYYNDDEVYKGA------------------------DGQYYNAQHNPVQWM 160
              Y   D+ +  D  V                            +         PV+  
Sbjct: 124 IQLYCNTDKKFLPDRYVVGTCPYCKADEQYSDLCEKCGRVPEEIENPHCSICGQTPVKK- 182

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + YFF+L  + DK+  Y   +    L  + +  V +++K GL D  ++R    WGI I
Sbjct: 183 KTKHYFFKLKNFSDKISQYLNDNKN--LQKDVKKYVQNWIKDGLTDWDITRD-ISWGIPI 239

Query: 221 PDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYW 275
           PD    Q + Y W D    Y+++T    N +G   K +  +    H IGKDI+  H ++ 
Sbjct: 240 PDGGANQKVFYGWFDNHLAYISSTIKFLNGNGKDGKKFWNESDIYHFIGKDIVYHHYLFL 299

Query: 276 PAFL--LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA    +     LP  + + G +  + +KISKS    I   + +     D LR++L+   
Sbjct: 300 PAIRLGIEEEYKLPDYIPTRGHLTLQSKKISKSRNWYIGLKDFLAIFPADYLRFYLISIN 359

Query: 334 ACGKDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +D   ++      ++N++L   +GNLV+R++   +K ++G +P P  F + D     
Sbjct: 360 PYSQDDLNFNWGEFATKINSELIGNLGNLVNRALGFTVKSFNGAVPGPDEFDDIDNESKK 419

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + + ++  +   M+   + RAL +++   +  ++YF  ++PW+    N    +T ++++V
Sbjct: 420 MINELVSHLGILMEENHLDRALKKILQFSAHFNQYFQHKEPWK----NGPGTNTCVFLSV 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ----RLKPGFMLHKTFDPIF 507
             IR LAI +  F+P+ + KI+  L + D N   Q  D+     LK G  L  +  P+F
Sbjct: 476 NAIRSLAIAVYPFLPESSQKIWLQLGL-DGNVSAQMFDEISNITLKQGHKLG-SVSPLF 532


>gi|319442718|ref|ZP_07991874.1| methionyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 621

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 149/541 (27%), Positives = 243/541 (44%), Gaps = 69/541 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  S A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   AQ
Sbjct: 3   KHVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGNEVLMVSGTDEHGTPLLVQAQ 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV  +   D+ +R   +    L +SYD F RTT + H+   + L++ ++D G + +  
Sbjct: 63  KEGVPVQELADRYNRIIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFRGLNDNGYMIRQT 122

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQW---------------- 159
             G    +      D  +             G   +   N +                  
Sbjct: 123 TVGAIDPKTGRTLPDRFIEGTCPICGATDARGDQCDNCGNQLDPADLIDPRSKIDGATPD 182

Query: 160 -MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E E +   L A+ + L  +  +   +       N  ++ +K  ++  ++SR   DWG+
Sbjct: 183 FVETEHFMLDLPAFAEALEKWLSTREGWR--PNVLNFSLNLLKD-MRPRAMSRD-IDWGV 238

Query: 219 KIPDDPQ-----YIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPAD-----LHVIGKD 266
            +P +         +YVW DA+  YL+ +       G K   K W +D      + +GKD
Sbjct: 239 PVPIEGWQDNEAKKLYVWFDAVVGYLSASIEWAWRTGDKDAWKKWWSDPEALSYYFMGKD 298

Query: 267 ILRFHAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA LL                 L LP +V S  F+   G K S S G VI 
Sbjct: 299 NITFHSQIWPAELLGYAGNGAKGGEAGEYGELNLPTEVVSSEFLTMSGSKFSSSKGVVIY 358

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + ++E G DALRYF+        D  +  D   +R+N +LAN  GNLV+R+VSM  K+
Sbjct: 359 VRDFLQEFGPDALRYFIAVAGPENMDTDFTWDEFVRRINTELANEWGNLVNRTVSMAHKN 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   IPTPG FT  D+++L   +     + E +++      +++ + +V+  ++Y  AQ+
Sbjct: 419 FG-EIPTPGEFTAEDQALLDESAAAFGIVGEYLEHSRFKAGISEAMRIVARANQYIAAQE 477

Query: 433 PWELKKTNP------------DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           PW+L K               +R STVL+  ++V+     LL  ++P  A KIF++L  A
Sbjct: 478 PWKLAKAAKGTEDTAADPAARERLSTVLFTALQVVADANTLLTPYLPFSAQKIFELLGGA 537

Query: 481 D 481
            
Sbjct: 538 G 538


>gi|296438335|gb|ADH20488.1| methionyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 550

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 217/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTLKKLGISVDFFSRTTNAYHPAIVQDFYQNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T           +  KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGNPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNSIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +A + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKACSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIIPETALKILEMI 506


>gi|311740856|ref|ZP_07714683.1| methionine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311304376|gb|EFQ80452.1| methionine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 627

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 145/525 (27%), Positives = 222/525 (42%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 20  ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 79

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R        L +SYD F RTT + H+   + L+K +   G + K  
Sbjct: 80  KEGVSVRELADRYNRQIVTDLANLGLSYDLFTRTTTRNHYSVVQELFKGLYANGYMLKET 139

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYF 166
             G  S          Y        GADG   +               NPV  +  E   
Sbjct: 140 TQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETPK 199

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L   +   +  L   R +   + +K  L  L   R        DWGI IP
Sbjct: 200 FIETEHFLLDLPSIKDELQKWL-STREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPIP 258

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA----DLHVIGKDILR 269
            +         +YVW DA+  Y        Y      +   FW        +  GKD + 
Sbjct: 259 VEGWQDNNAKKLYVWFDAVIGYLSSSIEWAYRTGQPEAWKDFWQNPEARHYYFQGKDNIT 318

Query: 270 FHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA                    L LP ++ S  ++   G K S S G VI   +
Sbjct: 319 FHSQIWPAELLGYAGKGNKGGELHQYGELNLPTEIVSSEYLTMSGSKFSSSKGVVIYVKD 378

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 379 FLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAFKNFG- 437

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A  E D+ IL +     +     ++     +A+  ++ +V E + Y   Q+PW+
Sbjct: 438 EVPAPAALEEKDKEILQLAEETFETAGSLLEQSKFKQAITAIMHVVGEANAYIADQEPWK 497

Query: 436 LKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+    ++L  ++P  A K+ + L 
Sbjct: 498 LAKDEAQRERLATVLWTALQVVSDCNVMLTPYLPFTAQKVHETLG 542


>gi|255325447|ref|ZP_05366551.1| methionine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297533|gb|EET76846.1| methionine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 627

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 145/525 (27%), Positives = 222/525 (42%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 20  ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 79

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R        L +SYD F RTT + H+   + L+K +   G + K  
Sbjct: 80  KEGVSVRELADRYNRQIVTDLANLGLSYDLFTRTTTRNHYSVVQELFKGLYANGYMLKET 139

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYF 166
             G  S          Y        GADG   +               NPV  +  E   
Sbjct: 140 TQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETPK 199

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L   +   +  L   R +   + +K  L  L   R        DWGI IP
Sbjct: 200 FIETEHFLLDLPSIKDELQKWL-STREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPIP 258

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA----DLHVIGKDILR 269
            +         +YVW DA+  Y        Y      +   FW        +  GKD + 
Sbjct: 259 VEGWQDNNAKKLYVWFDAVIGYLSSSIEWAYRTGQPEAWKDFWQNPEARHYYFQGKDNIT 318

Query: 270 FHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA                    L LP ++ S  ++   G K S S G VI   +
Sbjct: 319 FHSQIWPAELLGYAGKGNKGGELHQYGELNLPTEIVSSEYLTMSGSKFSSSKGVVIYVKD 378

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 379 FLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAFKNFG- 437

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A  E D+ IL +     +     ++     +A+  ++ +V E + Y   Q+PW+
Sbjct: 438 EVPAPAALEEKDKEILQLAEETFETAGSLLEQSKFKQAITAIMHVVGEANAYIADQEPWK 497

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+    ++L  ++P  A K+ + L 
Sbjct: 498 LAKDETQRERLATVLWTALQVVSDCNVMLTPYLPFTAQKVHETLG 542


>gi|262182843|ref|ZP_06042264.1| methionyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 610

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 147/525 (28%), Positives = 225/525 (42%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G DVL  +GTDEHG  +   A 
Sbjct: 3   ETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R        L +SYD F RTT + H+   + L+K + + G + K  
Sbjct: 63  KEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIKET 122

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYF 166
             G  S          Y        GADG   +   N            PV  +  E   
Sbjct: 123 TQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGETPK 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L   +   E  L   R +   + +K  L  L   R        DWGI IP
Sbjct: 183 FIDTEHFLLDLPAVKDVLEEWL-KTREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPIP 241

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA----DLHVIGKDILR 269
            +         +YVW DA+  Y        +      +   +W        +  GKD + 
Sbjct: 242 VEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWKDYWQNPQARHYYFQGKDNIT 301

Query: 270 FHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA                    L LP ++ S  ++   G K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGVVIYVKD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 362 FLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAHKNFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A  ++D+ IL++         E ++     +A+  ++ +V E + Y  A +PW+
Sbjct: 421 EVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVAAMEPWK 480

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+    ++L  F+P  A K+ + L 
Sbjct: 481 LAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETLG 525


>gi|145239045|ref|XP_001392169.1| methionyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134076672|emb|CAK45203.1| unnamed protein product [Aspergillus niger]
          Length = 659

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 116/551 (21%), Positives = 223/551 (40%), Gaps = 46/551 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + +++A+ Y N  PH+G+    ++ ADV ARFH+  G   L+  GTDE+G     
Sbjct: 11  KGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARFHKACGHQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  + + +  +I +D F RT  ++H +  + ++KK+ + G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQQVYEWFEIGFDHFGRTPTQQHTEISQAIFKKLYENGYLT 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +     ++              Y  A G   +   + +   +           
Sbjct: 131 EKTAEQPFCETHGSFLADRYVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKLDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 191 TPVRRSTKHIHLLLDKLQPQIEEWSKNAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P +     ++YVW +A   Y + T    +      +  P D+     +GKD + 
Sbjct: 250 KWGVPVPLEGFETKVLYVWFEACIGYPSITANYTSDWELWWRN-PEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHSVIFPGSQLGTKEKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGTSAKETGVPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L++      D  ++     +  N++L   +GNLV+R + ++   Y  ++P      ES
Sbjct: 369 YYLLKNRPETGDTQFEWRSFVESNNSELLAKLGNLVNRVIKLVTASYGSVVP-EFTVPES 427

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            +  L   +  L++  E M+   +   +   + L    +    A +    L    P+RA+
Sbjct: 428 FQPTLDEVTATLRQYIEEMEGAHLRAGVVSAMKLAEAGNGLIQANRLDNSLIANEPERAA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA------DENRCFQSLDQRLKPGFML 499
            V+   + +I  LA +   ++P  +  I + L V        E+         +KPG  +
Sbjct: 488 AVVGTVLNLIHLLASVFSPYLPATSKSINEQLDVPFGLIPSLEDIKDGWKPTAIKPGHKI 547

Query: 500 HKTFDPIFPRF 510
            K    +F R 
Sbjct: 548 GKA-KYLFSRI 557


>gi|18313703|ref|NP_560370.1| methionyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|25009379|sp|Q8ZU56|SYM_PYRAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18161256|gb|AAL64552.1| methionyl-tRNA synthetase alpha subunit [Pyrobaculum aerophilum
           str. IM2]
          Length = 570

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 120/540 (22%), Positives = 226/540 (41%), Gaps = 38/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ RL G +V+F +G+D HG  +   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLKGHEVVFVSGSDVHGTPVEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +      ++    +IS+D +  T  + H    +  + KI + G I+    
Sbjct: 63  LGVDPAEYSMKMHAIVAELFKKWNISFDLYTHTHSETHIKFVQDFYLKIYENGYIFTKED 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  RD+ Y  D            E  +G   +      +P Q +E +          
Sbjct: 123 EVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLIEPKCAVCGSKPEW 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-- 219
                +Y                   LP   +   ++ +K GL+  +++R    WGI   
Sbjct: 183 RITKHWYLDLRRLEDRIRKYVEENPHLPPNAKEMSLAMLKEGLRPRAVTRDN-KWGIPAP 241

Query: 220 IPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
            P      +YVW +A+  Y+      +       + K +  D     +  +GKD + FH 
Sbjct: 242 FPGAEGKTIYVWFEAVLGYISAVVEYFKKIGREEEWKRFWLDPETKVVFFVGKDNVPFHV 301

Query: 273 IYWPAFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I  PA LL+      +P    S  ++L++G+K SKS    +   E ++ +  D  R+ L+
Sbjct: 302 IILPALLLANGGGYVMPTTTASTEYLLYEGDKFSKSRRWGVWIDEALQLLPADYWRFVLI 361

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +      + +N  L + +GN  +R +S I     G +P  G  +  DE  
Sbjct: 362 YIRPENRDTNFSWSTALEIINKVLNDDVGNYANRVLSFIKNRMGGAVPPRGKPSRDDEEF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +    R+ ++   + +   +  A+  V+ +  E ++Y +A+ PW+L K + D A+ V+Y 
Sbjct: 422 IEKVKRLFEKAEAHYEAIELKDAVHTVVEIAREGNKYLNARAPWDLVKKDVDAANAVMYH 481

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               ++ LA+ L   +P+ A +++ ++ + D    ++   +    G  L +   P+F + 
Sbjct: 482 AYWSLKFLAVGLAPAIPESAEQLWKMMGL-DAPLTWEEAKRPPAVGKALGE-VRPLFRKI 539


>gi|237802466|ref|YP_002887660.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273700|emb|CAX10478.1| methionyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 550

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 216/507 (42%), Gaps = 34/507 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E  ++ I++A+ Y N   H GH     + ADV ARF RL G +VL+  G+DE+G  I   
Sbjct: 2   ESSRILITSALPYANGPLHFGHITGAYLPADVYARFQRLQGKEVLYICGSDEYGIAITLN 61

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ AG+  + +VD   +  +D    L IS D F RTT   H    +  ++ + ++G +  
Sbjct: 62  AELAGMGYQEYVDMYHKLHKDTFKKLGISVDFFSRTTNTYHPAIVQDFYRNLQERGLVEN 121

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS  +  +  D  V            +G + Q   A +      E         
Sbjct: 122 QVTEQLYSEEEGKFLADRYVVGTCPKCGFDRARGDECQQCGADYEARDLKEPRSKLTGAA 181

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              R + +    L   +      +            ++     L+  +++R    WGI +
Sbjct: 182 LSLRDTEHAYLHLERMKEDLLAFVQGIYLRPHMRNFVTDYIEHLRPRAVTRD-LSWGIPV 240

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPADL----HVIGKDILRFHAI 273
           PD    + YVW DA   Y++ T       G      KFW  D       IGKD   FHA+
Sbjct: 241 PDLENKVFYVWFDAPIGYISGTMDWAASIGDPEAWKKFWLDDTVTYAQFIGKDNTSFHAV 300

Query: 274 YWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA  +  +LP  K   + +  F+L +G + SKS GN ID    +E   +D LRY L  
Sbjct: 301 IFPAMEIGQSLPYKKVDALVTSEFLLLEGFQFSKSDGNFIDMDAFLETYSLDKLRYVLAA 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +     K R N++L    GN V+R ++  +K+      +     + D   +
Sbjct: 361 IAPETSDSEFSFQEFKTRCNSELVGKYGNFVNRVLAFAVKN-GCTELSSPQLEQKDLDFI 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
           S   ++ ++  E+     + +  + ++ L +  + YF+ + PW+L K  N +R   +L+ 
Sbjct: 420 SKSQKLAKDAAEHYAQYSLRKVCSTIMELAALGNGYFNDEAPWKLAKEGNWNRVRAILFC 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
                + LA++    +P+ A KI +++
Sbjct: 480 ACYCQKLLALISYPIMPETALKILEMI 506


>gi|163747185|ref|ZP_02154540.1| methionyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379460|gb|EDQ03874.1| methionyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 570

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 116/553 (20%), Positives = 226/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRGQEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +       +A+   +S++ F R++  ++    +     ++D+G I +   
Sbjct: 63  AGKPVEDYCAEMYAVQARIAEGFGLSFNHFGRSSSVQNRKLTQHFAGALADQGLIEEVSQ 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP---------------VQ 158
              YS  D  +  D  V            +G        Q +P               ++
Sbjct: 123 RQIYSPTDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTISGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F R S  +D+L  +  S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 MRETKHLFLRQSKLKDELDDWINSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGV 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    Q        + YVW DA   Y+       +         +W  D          
Sbjct: 242 PVKRGDQDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWESWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +  +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIKGSGEPWKLVDYIKSFNYLTYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPETSDAEFTWENFQASVNKDLADVLGNFISRITKFCRSKFGEAVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G + E++++++   +  +      M+   + ++ A++  + +  + Y  AQ PW   KT
Sbjct: 422 AGEYGEAEQALIEDITARVARYETLMEAMEVRKSAAELRGIWAAGNEYLQAQAPWTTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGF 497
           +PD+A+  + + + +I   A+L   F+P  A  + + + VAD        +   +L P  
Sbjct: 482 DPDKAAAQVRLALNLIPLYAVLSAPFIPSAAASMLEAMKVADMPWPDDVPAALGKLAPNH 541

Query: 498 MLHKTFDPIFPRF 510
              +  + +F + 
Sbjct: 542 AF-EVPEVLFAKI 553


>gi|227487803|ref|ZP_03918119.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542444|ref|ZP_03972493.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092305|gb|EEI27617.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181642|gb|EEI62614.1| methionyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 608

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 139/528 (26%), Positives = 225/528 (42%), Gaps = 53/528 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 3   NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMRGENVLMVSGTDEHGTPLLVQADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T +    + +         L ++YD F RTT + H+   + L+  +   G + K   
Sbjct: 63  EGTTVQELATRYNEQIVHDLAGLGLTYDLFTRTTTRNHYAVVQELFDGLYKNGYLIKQTT 122

Query: 125 SGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHN---------PVQWMEEEGYFF 167
            G  S        D  +          GA G   +   N         PV  +  E   F
Sbjct: 123 KGAISPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQLDPVDLIDPVSKINGETPKF 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKI-- 220
             + +    L          L   R +   + +K  L  L   R        DWG+ I  
Sbjct: 183 VETEHFMLDLPAVADALAEWL-KGREDWRPNVLKFSLNLLEDIRPRAISRDIDWGVPIPV 241

Query: 221 ---PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
               DD    +YVW DA+  YL+ +    +   +    + +  D      + +GKD + F
Sbjct: 242 EGWQDDHAKKLYVWFDAVVGYLSASIEWAHRSGNPEAWRDFWNDPETRSYYFMGKDNITF 301

Query: 271 HAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WP+ LL                 L LP +V S  ++   G K S S G VI   + 
Sbjct: 302 HSQIWPSMLLGYAGKGAHGGEVYELGELNLPTEVVSSEYLTMSGSKFSSSKGIVIYVKDF 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D LRYF+        D  +  +   +RVN +LAN  GNLV+R+VSM  K++   
Sbjct: 362 LEEFGPDPLRYFISVAGPETNDTDFTWEEFVRRVNNELANSWGNLVNRTVSMAYKNFG-E 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P PG  T++D ++LS+       + +++ N    + +   + +V E + Y    +PW+L
Sbjct: 421 VPQPGELTDADRALLSLAEEAFDIVGDHLNNSRFKQGINHAMHVVGEANAYIAEMEPWKL 480

Query: 437 KKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            K     +R +TVL+V ++V+     LL  ++P +A ++ + L    E
Sbjct: 481 AKDESQRERLATVLWVALQVVSDCNTLLTPYLPHIAQQVHETLGRTGE 528


>gi|54020190|ref|YP_115920.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987363|gb|AAV27564.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 520

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 158/516 (30%), Positives = 272/516 (52%), Gaps = 12/516 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ 
Sbjct: 7   KMTKKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQL 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A  A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ 
Sbjct: 67  AAKANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFN 126

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +  
Sbjct: 127 GEYQGLYSISDEEFLSQSQAVYQNRNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLL 186

Query: 182 SHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYL 239
            +P+FI   +  NE   +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL
Sbjct: 187 ENPKFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYL 246

Query: 240 TTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
           +      + +  K   +  D    + V+GK+I RFH IYWP FL S N  LP  + +HG+
Sbjct: 247 SVFKDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGW 306

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++    K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   
Sbjct: 307 LITPEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFV 366

Query: 356 NGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N  GNL+SR++++I+K +D  ++        +D S        L E  +N     I +A 
Sbjct: 367 NTFGNLISRTIALIVKKFDQPLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAF 426

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             VI L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I 
Sbjct: 427 KTVIELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEIL 484

Query: 475 DILFVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
           + L + ++N      LD+  K  F   K   P FPR
Sbjct: 485 EFLGINEKNFLLITKLDKFDKINFK--KLEKPFFPR 518


>gi|302530295|ref|ZP_07282637.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439190|gb|EFL11006.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 594

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 148/538 (27%), Positives = 228/538 (42%), Gaps = 64/538 (11%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G  VL  +GTDEHG  I   A   G+T 
Sbjct: 5   VAWPYANGPRHIGHVSGFGVPSDVFSRYQRMAGNRVLMVSGTDEHGTPITVQADKEGMTP 64

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+ +R   +    L +SYD F RTT   H    + ++  ++  G +      G  S
Sbjct: 65  QQTADKYTRQIDEDLRGLGLSYDLFTRTTTGNHAAVTQEIFLALNRNGYVVPKTTRGAIS 124

Query: 130 LRDEA-----YYNDDEVYKGADGQYYNAQHNPV--------------------QWMEEEG 164
                     Y        G DG   +   N                      +++E E 
Sbjct: 125 PSTGRTLPDRYIEGTCPICGYDGARGDQCDNCGNQLDAAELINPKSRINGETPKFVETEH 184

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD- 223
           YF  L A+   L  +  +  ++   +    + +           ++R   DWG+KIP D 
Sbjct: 185 YFLDLPAFTQTLGDWLGTKTDWRPNVLNFTKNLIDDMR---PRPITRD-LDWGVKIPLDG 240

Query: 224 ----PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGKDILRFHA 272
               P    YVW DA+  Y + +      +      + W A+      + +GKD + FHA
Sbjct: 241 WRDQPLKRFYVWFDAVIGYFSASVEWARRNGTPDAWQEWWANPDARAYYFMGKDNITFHA 300

Query: 273 IYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             WPA LL                 L LP ++ S  F+   G K S S G VI   + + 
Sbjct: 301 QIWPALLLGQNGAGDRGGEPGKYGKLHLPDEIVSSEFLTMSGSKFSTSRGTVIYVHDFLR 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E G DALRYF+       +D  +  D   +R N +LAN  GNLV+RS+SM  K+ +G IP
Sbjct: 361 EFGPDALRYFISVAGPETQDTDFTWDEFVRRTNFELANEWGNLVNRSISMAHKN-NGAIP 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P A   +DE + ++  +  +    ++       A A+ + +V+  +RY   Q+PW+L K
Sbjct: 420 APTAPAPADEELKALSRQAFETAGGHLARSRFKLAAAEAMRVVTAANRYLSDQEPWKL-K 478

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA------DENRCFQSLD 490
            +PDR   VL+  ++V+     LL  F+P  A K+ + L          E R  + LD
Sbjct: 479 DDPDRRDAVLHTALQVVSDANTLLTPFLPHSAQKVHEALGGTGVWAAQPELREVEDLD 536


>gi|238785448|ref|ZP_04629433.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713653|gb|EEQ05680.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 635

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 118/506 (23%), Positives = 213/506 (42%), Gaps = 47/506 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G  V F    D HG  I   AQ  G+  +  + + S+  +       ISYD++  T  
Sbjct: 1   MRGNQVHFICADDAHGTPIMLKAQQLGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHS 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQ 148
             + +   +++ ++   G I     S  Y      +  D  V             G + +
Sbjct: 61  DENRELSSLIYSRLKANGYIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCE 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              A ++P +                E + +FF L A+ + L ++  S     L  +  N
Sbjct: 121 VCGATYSPTELIDPKSAVSGATPVMRESKHFFFDLPAFSEMLQAWTRSGA---LQEQVAN 177

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SK 252
           ++  + +SGL+   ++R    +G ++PD P    YVW+DA   Y+     L +  G    
Sbjct: 178 KMQEWFESGLQQWDITRDAPYFGFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDF 237

Query: 253 AKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
            +FW         H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS 
Sbjct: 238 DEFWREGAETDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSR 297

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           G  I     ++ +  D LRY+   +++    D   + +   +RVNAD+ N + NL SR+ 
Sbjct: 298 GTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNA 357

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
             I K + G +        +D ++    +     I +   ++   +A+ ++++L    +R
Sbjct: 358 GFINKRFAGKLADQ----LADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVANR 413

Query: 427 YFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y D Q PW + K          +  + + + R L   L+  +P L  +    L       
Sbjct: 414 YIDEQAPWVVAKEEGRDAELQAICSMGINLFRVLMTYLKPVLPSLNERTEAFLNTE---L 470

Query: 485 CFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + S++Q L  G  ++  F  +F R 
Sbjct: 471 TWDSIEQPLL-GHQIN-GFKALFNRI 494


>gi|328769498|gb|EGF79542.1| hypothetical protein BATDEDRAFT_12267 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 647

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 112/545 (20%), Positives = 214/545 (39%), Gaps = 39/545 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV AR+ R+ G +VLF  GTDE+G     
Sbjct: 3   KNERNVLITSALPYVNNIPHLGNLIGSVLSADVYARYSRIRGENVLFICGTDEYGTATET 62

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    ++ K   D+  +   +      I +D F RT  ++     + ++ K+   G + 
Sbjct: 63  KAIEEKLSCKQLCDKYFKFHDETYKWFQIDFDHFGRTITEQQTIITQDIYLKLEKNGHVM 122

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +   +  Y  + E++  D  V        Y+ A G   ++    +  +E +    +L   
Sbjct: 123 EDTVTQLYCNQHESFLADRFVEGTCPLCGYEDARGDQCDSCGKLLNAIELKNPRCKLDNA 182

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKTF 214
                             E+  E                     ++K GLK   ++R   
Sbjct: 183 APVARDSKHLFLNLTGQQEKLTEWFKKASSEGCWSANSQTITNSWLKEGLKPRCITRD-L 241

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P +     + YVW DA   Y + T           K  P D+     +GKD + 
Sbjct: 242 KWGTPVPKEGYENKVFYVWFDAPIGYFSITANYTKDWELWWKN-PKDVKLYQFMGKDNVP 300

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH + +P+ LL  N        + +  ++ ++  K SKS G  +    V++  + V+  R
Sbjct: 301 FHTVIFPSTLLGTNENWTLLHHLSTTEYLQYESGKFSKSRGVGVFGNNVVDSGIPVEVWR 360

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L+       D ++  +      N +L   +GN V+R V  I   YDG+IP      E 
Sbjct: 361 YYLLSIRPESGDSYFSWNSFIAANNTELLANLGNFVNRLVKFINAKYDGVIPAYKTTGEP 420

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
           +  ++S  + +L +  E + +  I   L   + + +  + Y    +    L   + +R  
Sbjct: 421 ETKLISSVNTLLHQFIEALNDVKIRTGLRLFMDISARGNLYLQENRIDNSLFANSRERCD 480

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            V+ V   +   ++ ++  ++P  +  I   L +           + +  G  +    + 
Sbjct: 481 NVVAVAANLAYLISAVVYPYMPSTSEGILRQLNLPMRRITDTWNAEDITAGHKIGAA-EY 539

Query: 506 IFPRF 510
           +F R 
Sbjct: 540 LFKRL 544


>gi|257068912|ref|YP_003155167.1| methionyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559730|gb|ACU85577.1| methionyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 599

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 147/577 (25%), Positives = 235/577 (40%), Gaps = 80/577 (13%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I   A   G++ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVEADKEGISA 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   D+N+R   +    L +SYD F RTT + HH   + ++  + D G + +   SG  S
Sbjct: 68  RDLADRNNRLIVEDLVALGLSYDLFTRTTTRNHHQVVQDMFVTVRDNGYMIEQTTSGAIS 127

Query: 130 LRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------QWMEEEG 164
                   D  +            +G        Q +P               +++E   
Sbjct: 128 PSTGRTLPDRYIEGTCPICSAGGARGDQCDNCGNQLDPTDLIDPVSRINGETPEFVETSH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  L A   +L  + +      L           +   +K  +++R   DWGI +P   
Sbjct: 188 WFLDLPALAAELGRWLDEREATGLWRPNVIRFSQNILEDIKPRAMTRD-IDWGIPVPGWE 246

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+  
Sbjct: 247 DQPNKRLYVWFDAVIGYLSASIEWARRSGDPEAWRRWWNDPETLAYYFMGKDNIVFHSQI 306

Query: 275 WPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA ++                 L LP +V S  F+  +G+K S S G VI   +V+E  
Sbjct: 307 WPAEMIAQNGQGDKGGEPGRFGELKLPTEVVSSEFLTMEGKKFSSSKGIVIYVRDVLERY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             DALRYF+       +D  +       R N +L  G GNLV+R+ +MI K+    IP  
Sbjct: 367 QPDALRYFISAAGPENQDADFTWVDFVSRTNNELVAGWGNLVNRTAAMIAKNVG-EIPEA 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G F E D ++L         +   ++      A+A+ + LV E + Y    +P+++K   
Sbjct: 426 GEFEEIDTALLDQIREGFTTVGGLIEAHRQRAAIAEAMRLVGEANAYVSRTEPFKMKAEE 485

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------------------- 478
              R  TVL+V  + +  L  +L  F+P+ AN +   L                      
Sbjct: 486 QRPRLLTVLHVLAQAVTDLNTMLAPFLPQSANAVERALGGQRQIAPMPRIEEVEDLDGGP 545

Query: 479 ----VADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
               +  +     + + R + PG  + K   PIF + 
Sbjct: 546 RYPIITGDYTDVPAWEHRPVTPGQTVAKP-TPIFVKL 581


>gi|84502718|ref|ZP_01000837.1| methionyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389113|gb|EAQ01911.1| methionyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 573

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 117/554 (21%), Positives = 233/554 (42%), Gaps = 51/554 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A    +S+D F R++  ++H   +    ++++ G I +   
Sbjct: 63  AGKPVAEYCAEMHDVQARIARDFRLSFDHFGRSSGPQNHRLTQHFAGRLAEAGLISEVDE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
              YSL D  +  D  +            +G        Q +PV  ++            
Sbjct: 123 HQMYSLSDGRFLPDRYIEGTCPNCGFEGARGDQCDNCTKQLDPVDLIDPHSTISGSKDLE 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F R SA +D+L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 MRATKHLFLRQSAMKDRLDAWIDSKDDWPVLTTSIAKKWLHDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    +        + YVW DA   Y+       +        ++W  D          
Sbjct: 242 PVRRGEEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGTDWERWWRTDKGAEDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++  +G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNFEGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +     +  VN DLA+ +GN VSR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPESSDAEFTWANFQASVNKDLADVLGNFVSRVTKFCRSKFGETVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G +   ++++++     L     +M    + ++   + ++    + Y  +  PW   K 
Sbjct: 422 GGDYGPREDALVAELETRLSAYAAHMDAMEVRKSAQDLRAIWVAGNEYLQSAAPWAAYKE 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---LKPG 496
           +P RA+ ++ +++ +IR  A++   F+P  ++++ + + ++D +    S+ +    L+PG
Sbjct: 482 DPARAAAIVRLSLNLIRLYAVVSAPFLPDASDRLAEAMHLSDRSWPEGSVAEALSLLQPG 541

Query: 497 FMLHKTFDPIFPRF 510
           +      D +F + 
Sbjct: 542 WAFD-VPDNLFRKI 554


>gi|149003959|ref|ZP_01828767.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758018|gb|EDK65024.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 568

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 121/502 (24%), Positives = 215/502 (42%), Gaps = 37/502 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +I  A  Y N   HIGHA  ++  D+LAR++R  G +VL+ +G+D +G  I+  A+   
Sbjct: 26  FFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 85

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D   + F++  + L  +YD + RT    HH+  + L+ ++ +K  +Y      
Sbjct: 86  KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 145

Query: 127 WYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWMEE 162
            Y   D  +  D  V                                 +   N  +  E 
Sbjct: 146 LYCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 205

Query: 163 EGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +++  S +Q+ L +Y               N    +++ GL D +++R   + GI +P
Sbjct: 206 EHFYYVFSEFQNLLETYLNDAEETVRWRKNAINLTKRYLREGLPDRAVTRDLPN-GIPVP 264

Query: 222 DDP--QYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            D      +YVW +A+  Y          L N             +V GKD + FH I W
Sbjct: 265 IDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTIIW 324

Query: 276 PAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA L      PLP+ + S  ++  + +KIS S    I   ++I++   D++RYFL     
Sbjct: 325 PAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTINAP 384

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +         N++L    GN ++R++  I K ++  IPT     E    IL   
Sbjct: 385 EMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPTKYLEGE----ILYNL 440

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   +   +++  + +AL ++   +   ++++D  KPW L++++ ++   VL   V +
Sbjct: 441 KELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCVII 500

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           I  L  +L  F+P    KI D+
Sbjct: 501 ILNLGQMLNPFIPFSGKKIEDM 522


>gi|310815507|ref|YP_003963471.1| methionyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754242|gb|ADO42171.1| methionyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 569

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/550 (21%), Positives = 222/550 (40%), Gaps = 50/550 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGHEVMFLCATDEHGTPAEIAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++  ++H   +     ++++G I +   
Sbjct: 63  AGKPVAEYCAEMHDVQAEIAKGFRLSFDHFGRSSSAQNHKLTQHFAGVLAERGFIREVTE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  D  Y  D  +            +G        Q +PV               +
Sbjct: 123 MQMYSPTDGRYLPDRYIEGTCPNCGFPDARGDQCDNCTKQLDPVDLINPRSAISGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  +   S  QDK+ ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 MRETKHLYLCQSQLQDKIAAWIDSKTDWPVLTTSIAKKWLTDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+ +     +        ++W  D          
Sbjct: 242 PVKKGDADWPGMEGKVFYVWFDAPIEYIASAQEWVDAGKGVDWERWWRTDKGADDVTYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +  
Sbjct: 302 FMGKDNVPFHTLTFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALSI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  D  +  VN DLA+ +GN VSR        +  +IP 
Sbjct: 362 LPADYWRWWLLSHAPETSDSEFTWDNFQMSVNKDLADVLGNFVSRVTKFCRSKFGEVIPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G +   + ++++  ++ LQ     M    + +A +++ ++    + Y  +  PW   KT
Sbjct: 422 GGTWGARENALIAELTQRLQAYEGFMDAMEVRKASSELRAIWVAGNEYLQSAGPWTTIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           + + A+    + + +IR  A+L   F+P  +  +   +  AD+            L  G 
Sbjct: 482 DTETAAMQTRLGLNLIRLYAVLSAPFIPDASATMLAAMKTADDQWPTDITGFLTALPAGH 541

Query: 498 MLHKTFDPIF 507
              +  + +F
Sbjct: 542 AF-EVPEVLF 550


>gi|162456166|ref|YP_001618533.1| methionyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|187645700|sp|A9FBU8|SYM1_SORC5 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|161166748|emb|CAN98053.1| metG2 [Sorangium cellulosum 'So ce 56']
          Length = 690

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/537 (23%), Positives = 213/537 (39%), Gaps = 51/537 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   HIGH  E    D+ AR+ R+ G   +     D HG  I   A+ 
Sbjct: 2   KRLLLTSALPYANGHIHIGHLVEYTQTDIFARYWRMTGRRCISLCADDTHGTAIMIRARQ 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +    +   S   +       I +D +  T    +   C  +W  + ++G +     
Sbjct: 62  EGRSEADVIADMSAAHQRDFAAFQIRFDHYGSTNSPANRALCEEIWASLRERGMVTTKEV 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEE----GYFFRL 169
           +  +  ++  +  D  V             G       + +     +E      G    +
Sbjct: 122 TQLFDPQEGMFLADRFVKGTCPKCAAPDQYGDSCDRCGSTYAATDLVEPRSALTGARPEV 181

Query: 170 SAYQDKLLSYYESHPE---FILPIERRNEVISFVKSG------LKDLSLSRKTFDWGIKI 220
            + Q  +++     P    +     R  + I+   +G      L+D  +SR    +G +I
Sbjct: 182 RSAQHLMVAIEPERPFLSTWTQGEGRMPKEIANYLAGHFLSEPLRDWDVSRPAPYFGFEI 241

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
           PD P    YVW DA   Y+  +    + +G     W        +HVIGKDI+ FH ++W
Sbjct: 242 PDAPGNYWYVWFDAPIGYMAASKEWCDREGEAFDDWWRSEETEIVHVIGKDIVYFHTLFW 301

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L SA   LP +V  HGF+   GEK+SKS G  +     ++ +    LRY+   +++ 
Sbjct: 302 PAMLKSARFSLPSRVQVHGFLTVNGEKMSKSKGTFVLASTYLKHLDPAYLRYYYASKLSS 361

Query: 336 G-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + + L  +VNA+L N + NL SRS   +            A    D  + +  
Sbjct: 362 KVDDIDLNLEELVNKVNAELVNKVVNLASRSSRFVA------QTGLSAVYPEDGGLFASA 415

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTV 452
           +     I          RA   +++L    + Y D  +PW L K          V  V +
Sbjct: 416 AEEGDAIGAAYAAFDYARATRSIVALADRANEYVDRMQPWALAKQPEKKAELQAVCTVAL 475

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF-------------VADENRCFQSLDQRLKPG 496
            + RQ+ + L   +PKLA+ +  +L              V      ++ L +R++PG
Sbjct: 476 NLFRQIVLYLAPVLPKLADDVARLLGCPMDRWALAKTPLVGTPVAAYEHLMKRVEPG 532


>gi|254440533|ref|ZP_05054027.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198255979|gb|EDY80293.1| methionyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 570

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/553 (20%), Positives = 223/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLIGSQLPADLYARYLRGRGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+A    +S+D + R++  ++    +     ++D G I +   
Sbjct: 63  AGKPVADYCAEMWTVQADLATRFGLSFDHYGRSSSLQNRALTQHFAGVLADNGLIEERME 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
           +  YS  D  Y  D  +            +G        Q +PV               +
Sbjct: 123 TQMYSHEDGRYLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPYSTISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  +   S  +D++ ++ +S   + +      +       GL+D  ++R   DWG+
Sbjct: 183 MRDTKHLYLLQSKLKDEIEAWIDSQTGWPVLTTSIAKKWLNDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD--------LH 261
            +             + YVW DA   Y+       +       A++W  D          
Sbjct: 242 PVMRGDAPWPGMEDKVFYVWFDAPIEYIACAQEWSDATGGQDWARWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++ +  P      + S  F+ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIIGSGEPWKRVDYLKSFNFLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  D  +   N DLA+ +GN VSR        +   +P 
Sbjct: 362 LPADYWRWWLLSRAPETSDSEFTWDAFQVDTNKDLADVLGNFVSRVTKFCRSKFSEAVPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G + +++  +++     L   +  M    + +A A++ ++ +  + Y  A  PW + K 
Sbjct: 422 GGEYGDAENKLIADLQTRLTTYQAAMDAIEVRKAAAELRAMWAAGNEYLQAAAPWSVFKE 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +PD+A+  + + + +IR  A+L   F+P  +  +   +   D +      +  + L  G 
Sbjct: 482 DPDKAAAQIRLALNLIRIYAVLSAPFIPTASATLLSAMNTMDMDWPDDMNASARALSAGH 541

Query: 498 MLHKTFDPIFPRF 510
                 D +F + 
Sbjct: 542 AFT-VPDNLFAKI 553


>gi|254485609|ref|ZP_05098814.1| methionyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214042478|gb|EEB83116.1| methionyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 570

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 113/553 (20%), Positives = 225/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + +  +       +AD   +S+D F R++  ++    +     + ++G I +   
Sbjct: 63  AGKPVEDYCAEMHEVQARIADGFGLSFDHFGRSSSIQNQRLTQHFAGALYNEGLIEEVEQ 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP---------------VQ 158
              YS  D  +  D  V            +G        Q +P               ++
Sbjct: 123 RQIYSETDGRFLPDRYVEGTCPNCGFEDARGDQCDNCTKQLDPEDLINPRSTVSGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F + S  +D+L  +  S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 MRATKHLFLKQSKMKDRLDDWINSKTDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGV 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    +        + YVW DA   Y+       +        ++W  D          
Sbjct: 242 PVKRGDEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGSDWERWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++ +N P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIMGSNEPWKLVDYIKSFNYLTYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN +SR        +   +P 
Sbjct: 362 LPADTWRWWLLSHAPETSDAEFTWENFQASVNKDLADVLGNFISRITKFCRSKFSEAVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G +  ++ ++++  S  +   +  M+   + ++ A++ ++ +  + Y  A+ PW   KT
Sbjct: 422 AGEYGPAEHALIADLSERVSRYQAAMEAMEVRKSAAELRAIWAAGNEYLQAEAPWTTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRLKPGF 497
           +PD+A+  + + + +I   A+L   F+P  A  +   + V          +   +L PG 
Sbjct: 482 DPDKAAAQVRLALNLIPFYAVLSAPFIPDAAASMLSCVRVDQPIWPDDVPAALAQLAPGH 541

Query: 498 MLHKTFDPIFPRF 510
                 + +F + 
Sbjct: 542 AFD-VPEVLFAKI 553


>gi|313835960|gb|EFS73674.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927197|gb|EFS91028.1| methionyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970728|gb|EFT14826.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 592

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 229/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 4   NILAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   ++  R        L +SYD +  T    H    + ++ ++ + G + K   
Sbjct: 64  EGLTAQECAEKYHRVIAADLQGLGLSYDLYTSTMTDNHAHVTQEIFTRLHENGYVVKKSE 123

Query: 125 SGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 124 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLINPKSKTTGAAPEF 183

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   I + +  +      L+  +++R   DWGI+
Sbjct: 184 RETEHFFLDLPAVAESLTSWIDTRTDWRPNILKFSHNLL---EELRPRAITRD-LDWGIR 239

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 240 VPVEGWRDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 299

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 300 IVFHSVIWPGILLGTNGRGDKGGEPSEKLGILDLPTEIVSSEFLTMSGSKVSNSRGATIF 359

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+R +SM  K+
Sbjct: 360 VGDFLREFGPDALRYFIAIAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRLISMAFKN 419

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L         + E + +     A+ + + +V   + Y  A++
Sbjct: 420 C-HGIPAAGELTDADRQLLDASVAGFDVVGELLAHAKFKAAITEAMRIVGLANAYISAEE 478

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  +L  F+P  A KI++ L 
Sbjct: 479 PWKL-KDNPERRDTVLHVALQVVSDVNTMLTPFMPHSAQKIYEALG 523


>gi|167519384|ref|XP_001744032.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777994|gb|EDQ91610.1| predicted protein [Monosiga brevicollis MX1]
          Length = 616

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 117/547 (21%), Positives = 235/547 (42%), Gaps = 46/547 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + +++A+ Y N  PH+G+    ++ ADV ARF R  G  VLF  GTDE+G      A 
Sbjct: 19  RNILVTSALPYVNNVPHLGNIIGCVLSADVYARFARNQGHTVLFVCGTDEYGTATETKAL 78

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+     + + +  +IS+D F RT+     + C+ ++KK    G + +  
Sbjct: 79  AEGMTPREICDKYHAIHKGVYEWFNISFDHFGRTSTPLQTEICQDIFKKCYANGFVQQKD 138

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD----------------------------GQYYNAQHN 155
              WY    E +  D  V                                  +Y    + 
Sbjct: 139 EQQWYCTSCETFLADRFVEGICPDCGYDDARGDQCDECGHTFDAIKLKSPRCRYRKDCNK 198

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +       + +L   Q     +Y ES+ +       ++   ++   GL+  +++R   
Sbjct: 199 APELRTSRHLYLQLDKLQPLTEKWYAESNDKHAWSKIAQDISRNWFNMGLEARAITRD-L 257

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WGI +P +   + + YVW DA   Y++ T    +      K  P ++     + KD + 
Sbjct: 258 KWGIPVPLEGFTEKVFYVWFDAPIGYISITANYTDQWEQWWKN-PENVELFQFMAKDNVP 316

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH+I +P+ LL++  N  +   + +  ++ ++G + SKS G  +      +  +  D  R
Sbjct: 317 FHSIVFPSALLASQDNWTMLNHLNAVQYLNYEGTQFSKSRGVGVFGDSARDSGLAADVYR 376

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++L+       D  +D + L  + N +L N +GN  +R++S   + +DG +P   A  ++
Sbjct: 377 FYLLYMRPEASDANFDWEDLVAKHNNELLNNLGNFANRALSFCKRFFDGKVPKI-ALDDT 435

Query: 387 DESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
               ++  +  L+   E M++Q  I  A+  ++S+    ++Y  +  PW+L K     A 
Sbjct: 436 AVEAVAQVNTELRAYTEGMESQVRIRDAIRGILSVSRIGNQYLQSTMPWKLVKNPETAAQ 495

Query: 446 T--VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
              ++ V + +   +A++L+  +P  A ++   +  A+      +    L  G ++ +  
Sbjct: 496 AGSIVGVVLNLTYLIALMLEPIMPDTAQELLQQIG-AERRFLPSAFAPLLDEGHVIGEP- 553

Query: 504 DPIFPRF 510
            P+F + 
Sbjct: 554 KPLFEKI 560


>gi|330444658|ref|YP_004377644.1| methionyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807768|gb|AEB41941.1| methionyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 548

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 128/508 (25%), Positives = 219/508 (43%), Gaps = 41/508 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H GH     + AD  ARF RL G +VL+  G+DE+G  I   A+ 
Sbjct: 2   RVLITSALPYANGPLHFGHITGAYLPADAYARFCRLLGDEVLYLCGSDEYGIAITLNAER 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+  + ++D   +  +D  + L+IS D F RTT   H    +  ++ +   G I     
Sbjct: 62  AGMGYQEYIDVYHKLHKDTFEKLNISLDFFSRTTNTFHEGVVQSFYQCLQKHGLIENCFS 121

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP--------------------VQW 159
              YS  +  +  D          G D    +                         +  
Sbjct: 122 QQLYSEEESRFLADRYVEGECPKCGFDRARGDECQKCGADYEAIDLLYPKSKLSGAALVL 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E  +F L   ++ LLS+ +         E   + +      L+  +++R    WG+ 
Sbjct: 182 KETEHAYFHLEKMKEPLLSFIQGCNLR----EHVRKFVVDYIKNLRPRAITRD-LSWGVS 236

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD----LHVIGKDILRFHA 272
           + D P  + YVW DA   Y++ +       G      +FW  +    +  IGKD L FHA
Sbjct: 237 VQDFPNKVFYVWFDAPIGYISGSMDWAASQGDPEAWKRFWLEEDVKYVQFIGKDNLPFHA 296

Query: 273 IYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + +PA  +  +LP  K   + S  F L +GE+ SKS GN +D    ++   VD LRY L 
Sbjct: 297 VIFPAMEMGQDLPYKKADAIVSSEFYLLEGEQFSKSEGNYVDIDAFLDSYSVDQLRYVLA 356

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  D  +     K R N++L    GN ++R ++   K+    +  P    E D+  
Sbjct: 357 ATAPESADSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNQFVELRCPSDLMEGDKQF 416

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLY 449
           L     ++ + +   +   +  A + ++ L +  + YF+ Q PW+L K     R  T+L+
Sbjct: 417 LKEAQDLVDKAKSCYERYSLRSACSAIMELAALGNVYFNNQAPWKLLKEGSRSRVETILF 476

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +    + LA++    +PK A +I+++L
Sbjct: 477 CSCFCQKLLALIAYPILPKSATEIWEML 504


>gi|171186224|ref|YP_001795143.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558527|sp|B1YAZ7|SYM_THENV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|170935436|gb|ACB40697.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 565

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 129/536 (24%), Positives = 226/536 (42%), Gaps = 35/536 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ RL G DV+F +G+D HG  I   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    +  +      ++    DIS+D +  T    H    +  + KI + G I+    
Sbjct: 63  LGVDPADYAAKMHNIVAELFKRWDISFDLYTHTHSDVHIKFVQDFFLKIYNNGYIFTREE 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  RD  Y  D            E  +G   +      +P Q +E            
Sbjct: 123 EVPYCPRDRIYLPDRFIIGRCPYCGYERARGDQCENCGRLLDPKQLVEPRCAICGSKPEW 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-- 219
                +Y                   LP   +   +  +K GLK  +++R    WGI   
Sbjct: 183 RLTRHWYLDLRRLEDRIRRYVEENPHLPPNAKEMSLGMLKEGLKPRAITRDN-RWGIPAP 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
            P      +YVW +A+  Y++    L   +G +  +   D   +  +GKD + FH I  P
Sbjct: 242 FPGAEGKTIYVWFEAVLGYISAVAELKGEEGLRRYWKSPDTKIVFFVGKDNIPFHVIILP 301

Query: 277 AFLLS--ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           A LL+      LP    S  ++L++G+K SKS    I   E ++ +  D  R+ LV    
Sbjct: 302 ALLLANGDGYALPTTTASTEYLLYEGDKFSKSRRWGIWIDEALQLMPPDYWRFVLVYMRP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +      + +N  L + +GN V+R +++I     G +P PG   + DE  ++  
Sbjct: 362 ENRDTNFTWQAALEVINKVLNDDVGNYVNRVLTLIKNRMGGAVPPPGTPAKEDEDFVAKA 421

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           + + ++   +     +  AL  V+ +  E +RY +A+ PW+L + + + A+ V+Y     
Sbjct: 422 TDLFKKAERHYDAIELKDALHAVVEIAREGNRYLNARAPWDLLRRDRESANAVMYRAYWS 481

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++ LA  L    P+ A +++ +L V      ++   +  + G  L +   P+F ++
Sbjct: 482 LKMLAAGLTPVTPRSAEELWRMLGVR--QPSWEEAYKPPEAGAPLGE-VKPLFRKY 534


>gi|119871860|ref|YP_929867.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|187647759|sp|A1RRE2|SYM_PYRIL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119673268|gb|ABL87524.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 567

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 129/538 (23%), Positives = 229/538 (42%), Gaps = 37/538 (6%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y    PH+G+    ++ ADV AR+ R  G DV+F +G+D HG  I   A  
Sbjct: 3   KYVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRFRGHDVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + +  +  +   ++    DIS+D +  T    H    +  + KI + G I+    
Sbjct: 63  LGVDPEEYAKKMHQIVAELFKRWDISFDLYTHTHSDTHIKFVQNFFLKIYNNGYIFTKEE 122

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  RD+ Y  D            E  +G   +      +P Q +E            
Sbjct: 123 EVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLLDPKQLIEPRCAICGSRPEW 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-- 219
                +Y                   LP   +   +  +K GLK  +++R    WGI   
Sbjct: 183 RITKHWYLDLRKLEDRIRKYVEENPHLPPNAKEMSLGMLKEGLKPRAITRDN-KWGIPAP 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
            P      +YVW +A+  Y++    L   D  K + +  D     +  +GKD + FH I 
Sbjct: 242 FPGAEGKTIYVWFEAVLGYISAVVELFREDAGKWERYWKDPETKIVFFVGKDNIPFHVII 301

Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            PA LL+      LP    S  ++L++G+K SKS    I   E ++ +  D  R+ L+  
Sbjct: 302 LPALLLANGEGYTLPTTTASTEYLLYEGDKFSKSRRWGIWIDEALQLMPPDYWRFILIYI 361

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +      + +N  + + +GN ++R ++ I     G++P PGA T  DE  ++
Sbjct: 362 RPENRDTSFTWALALEIINKIMNDDVGNYINRVLTFIKNRMGGVVPPPGAPTREDEEFIN 421

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              ++ ++  ++     +  AL  V+ +  E +RY +A+ PWEL + + + A+ V+Y   
Sbjct: 422 RVIQLFKKAEKHYDAIELKDALHTVVEIAREGNRYLNARAPWELLRRDIEVANAVMYRAY 481

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             ++ +A  L    P+ A +++ +L ++     +    +   PG  L     P+F +F
Sbjct: 482 WSLKTIAAGLTPVTPRSAAELWKMLGIS--QPSWDEAYKPPTPGTPLG-DVRPLFRKF 536


>gi|270158203|ref|ZP_06186860.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289163540|ref|YP_003453678.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269990228|gb|EEZ96482.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288856713|emb|CBJ10524.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 552

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 136/543 (25%), Positives = 231/543 (42%), Gaps = 46/543 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK+R K+ +++A+ Y N   H+GH  E I  D+  R H++ G++ +   G D HG  I  
Sbjct: 1   MKQR-KMLVTSALPYANGHLHLGHLVEHIQTDIWVRTHKMSGIECISICGDDAHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+T +    +   +         I YD +  T    +      +++K+   G I 
Sbjct: 60  KAEQMGLTPETLTAEIKLSHERDFKAFAIDYDCYHTTHSPENQALAAAIYEKLKANGSII 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWM--------- 160
           K      Y    E +  D  V             G + +   A ++P   +         
Sbjct: 120 KRTIHQAYDPVKEMFLPDRYVKGTCPKCGAKDQYGDNCEVCGATYSPTDLIDAVSAISGA 179

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E YFF L  Y++ L  +        L  E  N++  +  +GLK   +SR    
Sbjct: 180 KPIEKESEHYFFDLPRYENLLKEWTRGG---HLQTEVANKLDEWFAAGLKQWDISRDAPY 236

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G  IP       YVW+DA   Y+ +   Y D    S A+FW  D      H +GKDI+ 
Sbjct: 237 FGFPIPGTTDKYFYVWLDAPIGYMASFKKYCDEHGVSFAEFWNKDSDTELYHFVGKDIVY 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FHA++WPA L ++    P  V++HGF+   G+K+SKS G  ++    IE +  + LRY+ 
Sbjct: 297 FHALFWPAMLAASGHRTPTAVYTHGFLTVDGQKMSKSRGTFLEARTYIEYLHPEYLRYYF 356

Query: 330 VRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
             +      D   + D    R+NADL   + N+ SR    I K +D  +        S+ 
Sbjct: 357 AAKLNGRVDDLDLNFDDFTSRINADLVGKVVNIASRCAGFINKRFDNTLSE----HLSEP 412

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RAST 446
            + +    V  EI E+  ++   RA+  ++    +V++Y D  KPW L K          
Sbjct: 413 QLYAELIAVRSEIIESFVSRDYARAIRHIMDCADKVNQYIDTNKPWVLAKEEERLCEVQD 472

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  + + + R L   L+  +P +++     L        +++++  L     ++  F P+
Sbjct: 473 ICTMGINLFRILITYLKPVLPLMSHSAETFLNCNP--LTWEAINTPLL-NHQINA-FQPL 528

Query: 507 FPR 509
             R
Sbjct: 529 MVR 531


>gi|329947575|ref|ZP_08294734.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328523890|gb|EGF50970.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 615

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 139/534 (26%), Positives = 229/534 (42%), Gaps = 55/534 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA   GV+ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADEEGVSA 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +        
Sbjct: 68  RELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMAQQVTRSAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P               +++E   
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLIGPRSRINGETPEFVETTH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  L A    L ++ +             +    +   ++  +++R   DWGI +P   
Sbjct: 188 WFLDLPALAQALGAWLDEREASGTWRPNVIKFSQNLLGDIRPRAMTRD-IDWGIPVPGWE 246

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+  
Sbjct: 247 DQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRAWWNDPQALSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA LL  N              L LP +V S  F+  +G+K S S G VI   + +E  
Sbjct: 307 WPAELLGYNGQGESGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLERY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +  + P P
Sbjct: 367 QADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKRFGQI-PEP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   ++D ++L         + + +       AL + + LV E ++Y    +P++LK  +
Sbjct: 426 GEPQDTDRALLDAVEAGFTSVGDLIAQHRQKAALGEAMRLVGEANKYVADTQPFKLKGDD 485

Query: 441 PD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           P+   R +TVL+   +V+  L ++L  F+P  AN +  +L  + +      +++
Sbjct: 486 PETQARLATVLHTLAQVVADLNLMLSPFLPHAANDVDRVLGGSGQVAPMPRIEE 539


>gi|227504173|ref|ZP_03934222.1| methionine--tRNA ligase [Corynebacterium striatum ATCC 6940]
 gi|227199217|gb|EEI79265.1| methionine--tRNA ligase [Corynebacterium striatum ATCC 6940]
          Length = 631

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 148/525 (28%), Positives = 226/525 (43%), Gaps = 53/525 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 24  ESVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 83

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+ +R        L +SYD F RTT + H+   + L+K + + G + K  
Sbjct: 84  KEGVTVRELADRYNRQIVTDLAGLGLSYDMFTRTTTRNHYSVVQELFKGLYENGYMLKET 143

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQH------------NPVQWMEEEGYF 166
             G  S          Y        GADG   +               NPV  +  E   
Sbjct: 144 TQGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDECGNQLDPVDLINPVSKINGETPE 203

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L   +   E  L   R +   + +K  L  L   R        DWGI IP
Sbjct: 204 FIETEHFLLDLPSVKDALEAWL-KTREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPIP 262

Query: 222 DDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILR 269
            +         +YVW DA+  Y        +      +   FW  D     +  GKD + 
Sbjct: 263 VEGWEENSAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWKDFWQNDNARHYYFQGKDNIT 322

Query: 270 FHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA                    L LP ++ S  ++   G K S S G VI   +
Sbjct: 323 FHSQIWPAQLLGYAGKGAKGGDLHKYGELNLPTEIVSSEYLTMSGSKFSSSKGVVIYVKD 382

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 383 FLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAHKNFG- 441

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A  ++D++IL +          N++     +A+  ++ +V E + Y  A +PW+
Sbjct: 442 EVPAPAALEDADKAILQLAEDTFAAAAANLEQSKFKQAITAIMHVVGEANAYIAAMEPWK 501

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K     +R +TVL+  ++V+    ++L  F+P  A K+ + L 
Sbjct: 502 LAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETLG 546


>gi|269125233|ref|YP_003298603.1| methionyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310191|gb|ACY96565.1| methionyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 599

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 145/589 (24%), Positives = 236/589 (40%), Gaps = 89/589 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +   +  + A  Y N   HIGH     +  D+ +R+ R+ G  VL  +GTDEHG  I  
Sbjct: 5   SQSRHILAAPAWPYANGPRHIGHVSGFALPCDMFSRYQRMAGNKVLMVSGTDEHGTPILV 64

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GV  +   D+ SR        L +SYD F RTT + H+   + ++K + D G I+
Sbjct: 65  QADKEGVGPREVADRYSRVIAGDLQALGMSYDLFTRTTTRNHYAVVQEIFKGLYDNGYIF 124

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV------------ 157
                G  S        D  +            +G        Q +PV            
Sbjct: 125 PKTTLGAISPSTGRTLPDRYIEGTCPICSYDGARGDQCDNCGNQLDPVDLINPRSRINGE 184

Query: 158 --QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             Q++E E +   L A+ D L  Y  S      P     +    +   L+  ++SR   D
Sbjct: 185 KPQFVETEHFMLDLPAFTDALSDYLRSKQGQWRPNVL--KFSLNLLEDLQPRAISRD-LD 241

Query: 216 WGIKIPDD-----PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVI 263
           WG+ +P +     P   +YVW DA+  Y + +        D    + W  D      + +
Sbjct: 242 WGVPVPLEGWRDRPDKRLYVWFDAVVGYFSASVEWARRSGDPEAWRAWWQDPDALSYYFM 301

Query: 264 GKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGN 309
           GKD + FH+  WPA LL                 L LP +V +  F+  +G K S S   
Sbjct: 302 GKDNIVFHSEIWPAMLLGYSGKGDKGGKPGSLGALNLPTEVVASEFLTMEGRKFSSSRQV 361

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + +E   VDALRY++       +D  +     ++R N +L    GNLV+RS++M 
Sbjct: 362 VIYVKDFLERYDVDALRYYVAVAGPETQDTDFTWQHFRERNNNELVAQWGNLVNRSLNMA 421

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++   IP  G  T+ D ++L         +   +       A+ +   +V E + Y  
Sbjct: 422 AKEFG-AIPEAGELTDVDRALLERSRAAFDRVGAELGRSRFKNAVTEAFEVVREANGYLS 480

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-------- 481
            Q+PW++   +  R  T+L+V ++V+     LL  F+PK ++K+  +L            
Sbjct: 481 TQQPWKV--EDKARKGTILHVALQVVDDAKTLLTPFLPKSSDKVHKMLGGEGVWAAMPEI 538

Query: 482 --------------------ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                               E   ++   + ++PG  L K   P+F + 
Sbjct: 539 REVDEEGGPSYAVITGDYTVEQARWEH--RPIRPGTPLAKP-KPLFAKL 584


>gi|328906096|gb|EGG25871.1| methionine--tRNA ligase [Propionibacterium sp. P08]
          Length = 601

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 229/526 (43%), Gaps = 59/526 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  + A  Y N   HIGH     + +DV AR+ R+ G  VL  +G+D HG  I+  A  
Sbjct: 13  NILAAVAWPYANGPRHIGHVSGFGVPSDVFARYMRMSGHRVLMVSGSDCHGTAISVKADQ 72

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   ++  R        L +SYD +  T    H    + ++ ++ + G + K   
Sbjct: 73  EGLTAQECAEKYHRVIAADLQGLGLSYDLYTSTMTDNHAHVTQEIFTRLHENGYVVKKSE 132

Query: 125 SGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHNPV--------------------QW 159
            G +           Y        G D    +   N                      ++
Sbjct: 133 MGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNCGRQLDPADLINPKSKTTGAAPEF 192

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F  L A  + L S+ ++  ++   I + +  +      L+  +++R   DWGI+
Sbjct: 193 RETEHFFLDLPAVAESLTSWIDTRTDWRPNILKFSHNLL---EELRPRAITRD-LDWGIR 248

Query: 220 IP-----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDI 267
           +P     D+P   +YVW DA+  YL+ +             + +  D      + +GKD 
Sbjct: 249 VPVEGWRDNPMKSIYVWFDAVIGYLSASIEWARRIGRPDAWREFWNDEDARSYYFMGKDN 308

Query: 268 LRFHAIYWPAFLLSAN---------------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + FH++ WP  LL  N               L LP ++ S  F+   G K+S S G  I 
Sbjct: 309 IVFHSVIWPGILLGTNGRGDKGGEPSEKLGILDLPTEIVSSEFLTMSGSKVSNSRGATIF 368

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + + E G DALRYF+       +D  +  +   +RVN +LAN  GNLV+R +SM  K+
Sbjct: 369 VGDFLREFGPDALRYFIAIAGPENQDTDFTWEEFVRRVNFELANEWGNLVNRLISMAFKN 428

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
               IP  G  T++D  +L         + E + +     A+ + + +V   + Y  A++
Sbjct: 429 C-HGIPAAGELTDADRQLLDASVAGFDVVGELLAHAKFKAAITEAMRIVGLANAYISAEE 487

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K NP+R  TVL+V ++V+  +  +L  F+P  A KI++ L 
Sbjct: 488 PWKL-KDNPERRDTVLHVALQVVSDVNTMLTPFMPHSAQKIYEALG 532


>gi|115402065|ref|XP_001217109.1| methionyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114188955|gb|EAU30655.1| methionyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 636

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 121/553 (21%), Positives = 225/553 (40%), Gaps = 50/553 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    + +++A+ Y N  PH+G+    ++ ADV ARFH+  G   L+  GTDE+G     
Sbjct: 11  EGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARFHKACGHRTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    V+ +    + ++  +++ +  +I +D F RT   +H +  + L+K++ D G + 
Sbjct: 71  KALEEKVSPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTPKHTEISQSLFKRLYDNGYLA 130

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ----------- 158
           +      +     ++  D  V            +G          +P +           
Sbjct: 131 EKSAEQPFCETHGSFLADRFVEGECPKCHYDDARGDQCDKCGHLLDPFELIKPRCKLDGA 190

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E +     L   Q  +  +  +  E    P   R    S++K GLKD  ++R   
Sbjct: 191 TPVPRETKHIHLLLDKLQPDIEKWVHASIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P       ++YVW +A   Y + T    +      +  P ++     +GKD + 
Sbjct: 250 KWGVPVPLPGFENKVLYVWFEACIGYPSITANYTDDWELWWRN-PENVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L +N        + +  ++ ++G K SKS G  +      +  V  D  R
Sbjct: 309 FHSVIFPGCQLGSNDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKQTGVPADVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL++      D  ++        N++L   +GNLV+R + ++   YD  IP      ES
Sbjct: 369 YFLLKNRPETGDTQFEWRSFVDSNNSELLAKLGNLVNRIIKLMAAQYDSTIP-EFTVPES 427

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            +  L   + +L++  E M+   +   +A  + L    +    A +    L    P+RA+
Sbjct: 428 FQPNLDEITGLLRQYIEEMEGVHLRAGVATAMKLAEAGNGLIQANRLDNALIANEPERAA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--------QRLKPGF 497
            V+   + +I  LA +   ++P  +  I + L          SLD          LKPG 
Sbjct: 488 AVVGTVLNLIYLLASVFYPYLPATSKSINEQLNAP--FALIPSLDDIKDGWKPTALKPGH 545

Query: 498 MLHKTFDPIFPRF 510
            + K    +F R 
Sbjct: 546 KVGKA-KYLFSRI 557


>gi|306835647|ref|ZP_07468656.1| methionine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568491|gb|EFM44047.1| methionine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 610

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 149/529 (28%), Positives = 229/529 (43%), Gaps = 53/529 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E L ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 3   ESLVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +   D+ +R   +    L +SYD F RTT + H+   + L+K +++ G + K  
Sbjct: 63  KEGVSVRELADRYNRQIVNDLANLGLSYDLFTRTTTRNHYSVVQELFKGLNENGYMLKET 122

Query: 124 YSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYF 166
             G  S          Y        GADG   +   N            PV  +  E   
Sbjct: 123 TKGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPVDLIDPVSKINGETPQ 182

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP 221
           F  + +    L   +   +  L   R +   + +K  L  L   R        DWGI IP
Sbjct: 183 FVETEHFLLDLPSLKDELQKWL-STREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPIP 241

Query: 222 DDPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
            D         +YVW DA+  YL+ +    +        K +  D      +  GKD + 
Sbjct: 242 VDGWQDNNAKKLYVWFDAVVGYLSASIEWAHRTGQPEAWKEFWQDPETRHYYFQGKDNIT 301

Query: 270 FHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA                    L LP ++ S  ++   G K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYAGKGSKGGELHQYGELDLPTEIVSSEYLTMSGSKFSSSKGVVIYVKD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            + E G D LRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K++  
Sbjct: 362 FLAEFGPDPLRYFIAVAGPENNDADFTWDEFVRRINNELANGWGNLVNRTVSMAHKNFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P P A  E DE+IL +           ++     +A+  ++ +V E + Y  +Q+PW+
Sbjct: 421 EVPVPAALEERDEAILQLAEETFTTAGNLLEQSKFKQAIVSIMHVVGEANAYIASQEPWK 480

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           L K     +R +TVL+  ++V+    ++L  F+P  A K+ + L    E
Sbjct: 481 LAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETLGRTGE 529


>gi|325067299|ref|ZP_08125972.1| methionyl-tRNA synthetase [Actinomyces oris K20]
          Length = 615

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 141/549 (25%), Positives = 230/549 (41%), Gaps = 58/549 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA   G++ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADEEGLSA 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +        
Sbjct: 68  RELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVTRSAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         +  +G        Q +P               +++E   
Sbjct: 128 PSTGRTLPDRYIEGTCPICGADGARGDQCDTCGNQLDPTDLISPRSRINGETPEFVETTH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  L A    L ++ +             +    +   ++  +++R   DWGI +P   
Sbjct: 188 WFLDLPALAQALGAWLDEREASGTWRPNVIKFSQNLLGDIRPRAMTRD-IDWGIPVPGWE 246

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+  
Sbjct: 247 DQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRAWWNDPQALSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA LL  N              L LP +V S  F+  +G+K S S G VI   + +E  
Sbjct: 307 WPAELLGYNGQGAAGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLERY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +  + P P
Sbjct: 367 QADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKRFGRI-PEP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               + D ++L         + E +       AL + + LV E ++Y    +P++LK  +
Sbjct: 426 AELEDIDRALLDAVEAGFASVGELIAQHRQKAALGEAMRLVGEANKYVADTQPFKLKGED 485

Query: 441 P---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKP 495
           P    R +TVL+   + +  L ++L  F+P  AN +  +L  +        +++   L P
Sbjct: 486 PATQARLATVLHTLAQAVTDLNLMLSPFLPHAANDVDRVLGGSGRIAPMPRIEEVDELDP 545

Query: 496 GFMLHKTFD 504
              L + FD
Sbjct: 546 DH-LPEAFD 553


>gi|50290389|ref|XP_447626.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526936|emb|CAG60563.1| unnamed protein product [Candida glabrata]
          Length = 584

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 157/523 (30%), Positives = 263/523 (50%), Gaps = 48/523 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAKAAQNAGV 67
           ++T I YPNA+PH+GH Y  ++ D+  R+  L+G     FTTGTDEHG KI  AA+    
Sbjct: 33  VTTPIFYPNAKPHLGHLYSSLLCDIYHRWQVLNGDSAALFTTGTDEHGLKIQLAAEKNNC 92

Query: 68  -TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K FVD+    F ++    DISY  FIRTT+  H +  ++LW    + G IYKG + G
Sbjct: 93  ESPKAFVDKLYPEFVELDKTYDISYTRFIRTTDPDHIENVKLLWNLCLENGYIYKGKHEG 152

Query: 127 WYSLRDEAYYNDDEV---YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           WYS+ DE +Y   +V       +        N V    EE Y+F+LS++++KL+++    
Sbjct: 153 WYSISDETFYPSSKVIKDPNNPNKYINTESLNEVIHQSEENYYFKLSSFKEKLINHITEF 212

Query: 184 PEFILPIERRNEVISFVKS-----GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
           P+F+ P  +R++++  +K+         +S       WGI++P+DP   +YVW DAL NY
Sbjct: 213 PDFVHPPSKRDQILRDLKNDPNITKDISISRPATRLQWGIEVPNDPSQKVYVWFDALCNY 272

Query: 239 LTTTGYLDNPDGSK------------------AKFWPADLHVIGKDILRFHAIYWPAFLL 280
           +++ G ++    +K                     W   +HVIGKDI +FH I+WP+FLL
Sbjct: 273 ISSIGGIEAVKQNKRALSNHILGNSDITVYQPTNVWKDTVHVIGKDIEKFHIIFWPSFLL 332

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +ANLPLPK++  H   L  G K+SKSLGNV++P+++    G D +R+FL+      +DG 
Sbjct: 333 AANLPLPKQIVVHSHWLCNGFKMSKSLGNVVEPMKISSHYGTDMVRWFLMENSKVEEDGD 392

Query: 341 YDKDGLKKRVNADLANGIGNLVSRS--VSMILKDYDGMIPTPGAFTESD----------- 387
           + ++ L         +  GNL++R       ++              +D           
Sbjct: 393 FQEEKLFATTEL-FVSKWGNLINRCCGAKFNIERSVHKYARNSEEVLADFEKIYIDNDMI 451

Query: 388 ---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
               S++    +++    +  +    +  +  +  +++  +  F   +PW+      D  
Sbjct: 452 IQARSLIQDVDQLILNAGKYYEKFQYNLLIKDIWKIINSTNSLFQYAEPWKKLGEQQD-- 509

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
             ++++  ++ R LAIL Q  +P+L++K+ D L V  E R   
Sbjct: 510 -IIIFLCADISRVLAILTQPIIPQLSHKLLDHLKVDQERRTID 551


>gi|149914331|ref|ZP_01902862.1| methionyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811850|gb|EDM71683.1| methionyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 572

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/555 (19%), Positives = 212/555 (38%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYQRARGHEVMFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G     +  +  +   D+A+   +S+D F R++  ++H   +    ++   G I +   
Sbjct: 63  TGEPVSEYCARMHKVQSDLAEGFRLSFDHFGRSSSPQNHSLTQHFAGRLHAAGLIEEVTE 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D          G D    +   N                       +
Sbjct: 123 KQVYSKADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E    + R S  +D+L  + +S  ++ +              GL+D  ++R   DWGI
Sbjct: 183 VRETTHLYLRQSLMRDQLSDWIDSKSDWPILTTSIARKWLNDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD-------- 259
            +    +        + YVW DA   Y+                  ++W  +        
Sbjct: 242 PVKRGDEDWPGMDGKVFYVWFDAPIEYIACAAEWAEAHSLDDSAWERWWRTERGAEDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA +L +         + S  ++ + G + S S G  +   + +
Sbjct: 302 TQFMGKDNVPFHTLSFPATILGSGEDWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR        +   +
Sbjct: 362 EILPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRVTKFCRSKFGEAV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G     + +++      ++  + +M    + +A  ++ ++    + Y     PW   
Sbjct: 422 PDGGEMRARERALIDDLGDRIRTYQAHMDAIEVRKASQELRAIWVAGNEYLQEAAPWSTY 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           K +P++A+  + + + +IR  A+L   F+P  +  +   +   D             L+ 
Sbjct: 482 KEDPEQAAAQIRLALNLIRLYAVLSAPFIPDASESMLTAMHTTDTGWPDDVAQALAHLEA 541

Query: 496 GFMLHKTFDPIFPRF 510
           G       + +F + 
Sbjct: 542 GHAF-SVPEVLFTKI 555


>gi|269796329|ref|YP_003315784.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098514|gb|ACZ22950.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 536

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 174/557 (31%), Positives = 255/557 (45%), Gaps = 79/557 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           LYI+T+I Y N +PH+GHA E++  DVLAR  RL G  V   +GTD+H  K   AA  AG
Sbjct: 4   LYITTSIPYVNGRPHLGHALELVHVDVLARHRRLRGAQVRVQSGTDDHALKNVSAASLAG 63

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGCYS 125
           V     V  N   F ++ D L +  D+F+RT ++ RH      LW+     GD+Y+  Y+
Sbjct: 64  VPVADLVAANGDRFVELVDALGVRTDEFVRTSSDPRHAPGVVALWEACRAAGDLYQKDYT 123

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G Y    E +Y  DE+  G  G        PVQ + E  +FFRLS Y+D++ +   S   
Sbjct: 124 GLYCPGCEQFYAADELVDGLCG----EHGTPVQEVTETNWFFRLSRYRDQVAALVASGEV 179

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFD---WGIKIPDDPQYIMYVWIDALTNYLTTT 242
            + P +RRNEV+ F+   + D+S+SR       WG+ +P DP  ++YVW DAL NYLT  
Sbjct: 180 AVEPRQRRNEVLGFLAGEVHDISVSRPADRAGGWGVPVPGDPGQVVYVWFDALVNYLTGL 239

Query: 243 GYLDNP---------------------------------------DGSKAKFW---PADL 260
           GY                                           +   A++W       
Sbjct: 240 GYGSETGRGAAVGREADAVRGGRESVGAAGEAVEVSVAVDVGVGVEEPFARWWGGGAERT 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           HV+GK I RFHA+YW AFLLSA LPLP +V  H ++   G KI+KS     DP  V+   
Sbjct: 300 HVLGKGIARFHAVYWVAFLLSAGLPLPTRVLVHDYLTVDGAKIAKSGSQAADPATVVATY 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR++L R+ A      +  + L    + DLANG+GNLVSR++++  +D     P  
Sbjct: 360 GPDALRWWLARDPAPVGTTDFTVERLVGCYDRDLANGLGNLVSRTLTLARRDRSWSAPPT 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-- 438
                    + +    +   +   +    +  A   +  LV   +R+ + + PW L +  
Sbjct: 420 AEVGV---EVRAAARALPDAVDAALARYDLRSACEAITGLVEHGNRFIEGEAPWRLARAA 476

Query: 439 --TNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
              + + A+    V+   VE+ R     L+ FVP+ A ++   L                
Sbjct: 477 DAGDLEAAARFEGVVDALVELCRVATHELEPFVPEGAARLVAQLDAG------------- 523

Query: 494 KPGFMLHKTFDPIFPRF 510
                      P FPR 
Sbjct: 524 ------VGRPVPAFPRI 534


>gi|148994771|ref|ZP_01823842.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149013148|ref|ZP_01833965.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168488899|ref|ZP_02713098.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|182684197|ref|YP_001835944.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           CGSP14]
 gi|225858843|ref|YP_002740353.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|237650047|ref|ZP_04524299.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821801|ref|ZP_04597646.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|303256108|ref|ZP_07342128.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303263003|ref|ZP_07348936.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264851|ref|ZP_07350767.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS397]
 gi|303266930|ref|ZP_07352807.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS457]
 gi|303269096|ref|ZP_07354876.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS458]
 gi|238691163|sp|B2IQ55|SYM_STRPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782873|sp|C1C727|SYM_STRP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|31087940|gb|AAO25636.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae]
 gi|147762999|gb|EDK69943.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147927037|gb|EDK78079.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|182629531|gb|ACB90479.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           CGSP14]
 gi|183572547|gb|EDT93075.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|225721595|gb|ACO17449.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|301802052|emb|CBW34784.1| Drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           INV200]
 gi|302596955|gb|EFL64081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302635830|gb|EFL66332.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302641345|gb|EFL71712.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS458]
 gi|302643563|gb|EFL73833.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS457]
 gi|302645539|gb|EFL75770.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS397]
 gi|332073411|gb|EGI83890.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 545

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 121/502 (24%), Positives = 216/502 (43%), Gaps = 37/502 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   HIGHA  ++  D+LAR++R  G +VL+ +G+D +G  I+  A+   
Sbjct: 3   IFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D   + F++  + L  +YD + RT    HH+  + L+ ++ +K  +Y      
Sbjct: 63  KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWMEE 162
            Y   D  +  D  V                                 +   N  +  E 
Sbjct: 123 LYCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 182

Query: 163 EGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +++  S +Q+ L +Y               N    +++ GL D +++R   + GI +P
Sbjct: 183 EHFYYVFSEFQNLLETYLNDAEETVRWRKNAINLTKRYLREGLPDRAVTRDLPN-GIPVP 241

Query: 222 DDP--QYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            D      +YVW +A+  Y          L N             +V GKD + FH I W
Sbjct: 242 IDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTIIW 301

Query: 276 PAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA L      PLP+ + S  ++  + +KIS S    I   ++I++   D++RYFL     
Sbjct: 302 PAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTINAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +         N++L    GN ++R++  I K ++  IPT     E    IL   
Sbjct: 362 EMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPTKYLEGE----ILYNL 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   +   +++  + +AL ++   +   ++++D  KPW L++++ ++   VL   V +
Sbjct: 418 KELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCVII 477

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           I  L  +L  F+P    KI D+
Sbjct: 478 ILNLGQMLNPFIPFSGKKIEDM 499


>gi|254581556|ref|XP_002496763.1| ZYRO0D07568p [Zygosaccharomyces rouxii]
 gi|238939655|emb|CAR27830.1| ZYRO0D07568p [Zygosaccharomyces rouxii]
          Length = 751

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/546 (19%), Positives = 212/546 (38%), Gaps = 41/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  + + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G     
Sbjct: 192 KGEKNIIITSALPYVNNVPHLGNIVGSVLSADIFARYCKARNYNTLFICGTDEYGTATET 251

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT      +  +  +++ D   + +D F RTT     +  + ++ K++D G + 
Sbjct: 252 KALEEKVTPLELCTKYHKIHKEVYDWFQVGFDYFGRTTTPLQTEIAQDIFSKLNDNGFLE 311

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +      Y     ++  D           Y+ A G   +     +   E      +L   
Sbjct: 312 EQTMKQLYCPVHNSFLADRFVEGECPKCHYEDARGDQCDKCGGLLDPFELINPRCKLDNA 371

Query: 173 QDKLLSYYESHPEFILPIERRNEVIS------------------FVKSGLKDLSLSRKTF 214
           + ++               R  + ++                  ++K GL+   ++R   
Sbjct: 372 EPEVKYSDHIFLSLDKLEGRVADWVNKKSEEGFWSKNSKTITQSWLKDGLRPRCITRD-L 430

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + +      ++YVW DA   YL+ T           K  P D+     +GKD + 
Sbjct: 431 IWGTPVPLEKYKDKVLYVWFDATIGYLSITANYTKHWQKWWKN-PEDVNLYQFMGKDNVP 489

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH + +PA  +           + +  ++ ++G K SKS    +      +  V     R
Sbjct: 490 FHTVIFPASQIGTGDQWTMLHHLNTTEYLQYEGGKFSKSRNIGVFGNNAKDSGVSPSVWR 549

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-E 385
           Y+L        D  +  D    + N++L   +GN V+R V  +   Y+G++P        
Sbjct: 550 YYLTSVRPESSDSHFSWDDFVTKNNSELLANLGNFVNRLVKFVNAKYNGVVPDYDVKNLP 609

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
             +S+ S  S++L      M+     R L   +SL +  +++    +    L    P ++
Sbjct: 610 GFDSLKSDISQILGSYIAEMEPAHERRGLELAMSLSARGNQFLQENRLDNNLFSNFPAKS 669

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + ++  +A ++  F+P+ A KI+ +L               +  G  ++   +
Sbjct: 670 DAVVGVGLNIVYAVASVIGPFLPEAAEKIYRMLNAPPLKID-DEFHLAILKGHNIN-PAE 727

Query: 505 PIFPRF 510
            +F R 
Sbjct: 728 YLFQRI 733


>gi|83858613|ref|ZP_00952135.1| methionyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853436|gb|EAP91288.1| methionyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 568

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 123/554 (22%), Positives = 240/554 (43%), Gaps = 53/554 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF RL G DVL    TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFMRLQGHDVLAICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+     + + +   +S+D F RT+  ++ +  +   + +   G I +   
Sbjct: 63  AGQDVRAYCDEQHEIQKSIGEQFGLSWDYFGRTSSPQNAELTQHFAETLEKNGLIAEVVE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
              YS+ D  +  D  V            +G          +P++ +E            
Sbjct: 123 QQVYSIDDGRFLPDRYVEGTCPNCGFEKARGDQCDNCGKLLDPIELIEPYSAVSGSKNLE 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +    + +  ++++ ++ ++   +  P   ++    ++  GL+D +++R    WG+
Sbjct: 183 VRDTKHLQLKQTVMEERIRAWVDAADGW--PSFAKSIAYKWLDEGLRDRTITRD-LKWGV 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLT-TTGYLDNPDGSKAKFWPAD--------LHV 262
            +  +          + YVW DA   Y++ T  + +   G    +W  D        +  
Sbjct: 240 PVTKNGQPREGFEDKVFYVWFDAPIGYISATREWAEQNGGDWESWWRTDKGADDVRYVEF 299

Query: 263 IGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH + +PA LL +  P      + +  ++   G K S S    +   + +E +
Sbjct: 300 MGKDNVAFHTVSFPATLLGSEEPWKTVDALKAFNWLTWYGGKFSTSNKRGVFMDQALELL 359

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L      G D  +  D  +  VN DLA+ +GN V+R +      ++G+IP  
Sbjct: 360 PADYWRWYLTAYGPEGSDAQFTWDHFQSSVNKDLADVLGNFVNRILKFGASRFEGVIPEG 419

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E++  + +  +  L  I  + +     +A A+  +L +  + Y    +PW   KT+
Sbjct: 420 GTPGEAEAWLETEVATRLANIASHYEAMEFRKAAAETRALWAAGNEYLTRAEPWVHFKTD 479

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR----CFQSLDQRLKPG 496
            D+A+  + + + ++R  AI+ Q  +P+ A KI   L +           +++   L+PG
Sbjct: 480 KDQAALGVRMGINLVRLCAIVAQPVIPQAAGKILAALGLEGAQDWPTGDAKAMLSALEPG 539

Query: 497 FMLHKTFDPIFPRF 510
               +  D +F + 
Sbjct: 540 RSF-EPADILFAKI 552


>gi|321258022|ref|XP_003193784.1| methionyl-tRNA synthetase; Mes1p [Cryptococcus gattii WM276]
 gi|317460254|gb|ADV21997.1| Methionyl-tRNA synthetase, putative; Mes1p [Cryptococcus gattii
           WM276]
          Length = 724

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 121/569 (21%), Positives = 213/569 (37%), Gaps = 66/569 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+     + ADV AR++R   +  L+  GTDE+G      
Sbjct: 29  GQRNVLITSALPYVNNVPHLGNIIGSTLSADVFARYNRTLNVPTLYICGTDEYGTATETK 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT      +  +   ++ +   IS+D + RT+   H +  + ++K++ D G    
Sbjct: 89  ALEEGVTPYELCTKFHKLHTEIYEWFQISFDKWGRTSTPEHTEITQGIYKRLHDNGLFRL 148

Query: 122 GCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHN-------PVQWMEEEG----- 164
                 Y   DE +  D          G D    +           P Q +         
Sbjct: 149 ETSDQTYCEDDELFLADRFVEGTCPNCGYDDARGDQCDKCALTFSSPTQLINPRCKRNKA 208

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------------SFVKSGLKDL 207
                R S +    L   +      +   R                      +  GL+  
Sbjct: 209 HTLSVRPSTHACYRLDLLQPRLVEWMQDARVKGKWGTNAVITDKGEIVEPRMLGEGLRPS 268

Query: 208 SLSRKTFDWGIKIPD---------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           +++R    WG+++P              ++YVW DA   Y + T         K    P 
Sbjct: 269 AVTRD-LKWGVEVPKVGDEEEDKAMEGKVIYVWFDAPIGYPSITA-TYTDKWEKWWKNPD 326

Query: 259 DL---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDP 313
           ++     +GKD + FH + +PA LL    P      + S  ++ ++  K SKS    +  
Sbjct: 327 NVELYQFMGKDNVYFHTVLFPATLLGTKEPWTMLHTISSTQYLNYEDTKFSKSRNIGVFG 386

Query: 314 IEVIEEVGVDA-LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
               E        RY+L+ +     D  +         N +L   +GN V+R V  I   
Sbjct: 387 NNARETGQPPEVWRYYLLSQRPENSDSSFLWSKFIAANNNELLANLGNFVNRVVKFINAK 446

Query: 373 YDGMIPTPGAF---------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            D  +P P  F           SD   ++  +  L+E RE M +  +   LA  ++L + 
Sbjct: 447 LDSKVPGPEGFAGGEVVPPSDSSDFDFVTDVNTRLKEYREQMDDTKLRGGLATAMALSAR 506

Query: 424 VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++Y         L  + P+R + VL   V +I  L+++   F+P  +  I   L     
Sbjct: 507 GNQYLQENSLDNALLASKPERCAEVLLNAVNLIYILSVVFHPFMPNTSEGILRQLNAPAR 566

Query: 483 NRCFQ-SLDQRLKPGFMLHKTFDPIFPRF 510
           +   + S+D  + PG +L K  + +F + 
Sbjct: 567 SLPTKFSID--ILPGHVLGKA-EYLFKKI 592


>gi|254461141|ref|ZP_05074557.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677730|gb|EDZ42217.1| methionyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 572

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 110/527 (20%), Positives = 220/527 (41%), Gaps = 49/527 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ ARF R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARFQRARGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++ +++ D  +    +++D+G I +   
Sbjct: 63  AGKPVDEYCAEMWDVQGEIAKGFRMSFDHFGRSSSQQNRDLTQHFAGRLADEGLIEEVTE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  DE +  D  +            +G        Q +PV               +
Sbjct: 123 QQIYSNTDERFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPVDLINPYSTISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R S  +D+L  + +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 MRETKHLYLRQSQMKDQLSDWIDSKDDWPVLTTSIAKKWLHDGDGLQDRGITRD-LSWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPADL------- 260
            +             + YVW DA   Y+       + +G       ++W  D+       
Sbjct: 242 PVKRGTEDWPGMEGKVFYVWFDAPIEYIACAKEWADANGLSDADWQRWWRTDMGAEDVRY 301

Query: 261 -HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +P  +L +  P      +    ++ + G + S S G  +   + +
Sbjct: 302 TQFMGKDNIPFHTLSFPVTILGSGEPWKLVDYIKGLNYLNYDGGQFSTSRGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+  +    D  +  +  +  VN DLA+ +GN VSR        +  ++
Sbjct: 362 AILPSDYWRWWLLSHVPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGEVV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G +   +E++++  +  ++    +M    + ++ +++ ++    + Y  A  PW   
Sbjct: 422 PEGGTWGAQEEALIAELTTRVRAYEGHMDAMEVRKSASELRAIWVAGNEYLQAAAPWVTF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           K +P++A+  + + + +IR  A+L   F+P  A  +   +   D   
Sbjct: 482 KEDPEQAAAQIRLALNLIRLYAVLSAPFIPDAAEDLMKAMHTDDAQW 528


>gi|168483129|ref|ZP_02708081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043369|gb|EDT51415.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 545

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 121/502 (24%), Positives = 216/502 (43%), Gaps = 37/502 (7%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   HIGHA  ++  D+LAR++R  G +VL+ +G+D +G  I+  A+   
Sbjct: 3   IFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEEVLYVSGSDCNGTPISIRAKKEN 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
            + K   D   + F++  + L  +YD + RT    HH+  + L+ ++ +K  +Y      
Sbjct: 63  KSVKEIADFYHKEFKETFEKLGFTYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWMEE 162
            Y   D  +  D  V                                 +   N  +  E 
Sbjct: 123 LYCTFDNQFLPDRFVEGKCPNCGTHLRGDQCDNCSAILDPIDLVDKRCSICSNEPEVRET 182

Query: 163 EGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E +++  S +Q+ L +Y               N    +++ GL D +++R   + GI +P
Sbjct: 183 EHFYYVFSEFQNLLETYLNDAEETVRWRKNAINLTKRYLREGLPDRAVTRDLPN-GIPVP 241

Query: 222 DDP--QYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            D      +YVW +A+  Y          L N             +V GKD + FH I W
Sbjct: 242 IDGFRDKKIYVWFEAVAGYYTASVDWAQKLQNNITDFWNNRTKSYYVHGKDNIPFHTIIW 301

Query: 276 PAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA L      PLP+ + S  ++  + +KIS S    I   ++I++   D++RYFL     
Sbjct: 302 PAILSGLEIEPLPEYIISSEYLTLENKKISTSNNWAIWLNDIIKKYDADSIRYFLTINAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +         N++L    GN ++R++  I K ++  IPT     E    IL   
Sbjct: 362 EMKDANFSWREFIYSHNSELLGSYGNFINRTLKFIEKYFESEIPTKYLEGE----ILYNL 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   +   +++  + +AL ++   +   ++++D  KPW L++++ ++   VL   V +
Sbjct: 418 KELYTTVGNLVESGHMKQALEEIFEYIRSANKFYDDMKPWALRESDIEKCKEVLATCVII 477

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           I  L  +L  F+P    KI D+
Sbjct: 478 ILNLGQMLNPFIPFSGKKIEDM 499


>gi|84515258|ref|ZP_01002620.1| methionyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510541|gb|EAQ06996.1| methionyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 570

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 117/553 (21%), Positives = 223/553 (40%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRKRGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +AD   +S+D F R++  ++H   + +  ++++ G I +   
Sbjct: 63  AGKPVAAYCAEMHAVQARIADGFGLSFDHFGRSSSPQNHKLTQAMAGRLAEMGLIREVTE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS+ D  +  D  +            +G        Q +P                +
Sbjct: 123 DQVYSVTDGRFLPDRYIEGTCPNCGFDSARGDQCDNCTKQLDPTDLINPRSTISGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  + R S  +  L  + +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRTTKHLYLRQSELKAALADWIDSKKDWPILTTSIAKKWLNDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    Q        + YVW DA   Y+       +        ++W  D          
Sbjct: 242 PVRKGDQDWPGMEGKVFYVWFDAPIEYIACAQEWQDAGKGNDWERWWRTDKGAGDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++    P      + S  ++ + G + S S G  +   + ++ 
Sbjct: 302 FMGKDNVPFHTLSFPATIMGTQQPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALDI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  D  ++ VN DLA+ +GN VSR        +   IP 
Sbjct: 362 LPSDYWRWWLLSHAPETSDAEFTWDAFQQDVNKDLADVLGNFVSRITKFCRSKFSETIPA 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     + ++++  ++ L   + +M    + +A A++ ++    + Y  A  PW   KT
Sbjct: 422 GGEHGAPEHALIAALTQRLTAYQGHMDAIEVRKAAAELRAIWVLGNEYLQANAPWTTIKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +PD A+  + + + +IR  A+L   F+P  +  + + +   D +      +    L  G 
Sbjct: 482 DPDMAAMQVRLGLNLIRLYAVLSAPFIPDASKLLLEAMQTDDADWPDDIGAALTALPAGH 541

Query: 498 MLHKTFDPIFPRF 510
                 D +F + 
Sbjct: 542 AF-SVPDNLFRKI 553


>gi|237785129|ref|YP_002905834.1| methionyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259511557|sp|C4LHI6|SYM_CORK4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|237758041|gb|ACR17291.1| Methionyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 612

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 138/538 (25%), Positives = 229/538 (42%), Gaps = 53/538 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A+ 
Sbjct: 4   PILTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMRGRDVLMVSGTDEHGTPLLVQAEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D  ++   +    L +SYD F RTT + H+   + L+  +   G + K   
Sbjct: 64  EGVSVQQLADTYNKQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFTTLYSNGYMVKQTT 123

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP------VQWMEEEGYFF 167
            G  S        D  +            +G        Q +P      V  +  E   F
Sbjct: 124 LGAISPSTGRTLPDRYIEGTCPICGAPGARGDQCDTCGNQLDPADLIDSVSKINGETPKF 183

Query: 168 RLSAYQDKLLSYYESHPEFIL---PIERRN--EVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             + +    L          L      R N  +    +   +K  +++R   DWG+ +P 
Sbjct: 184 VETEHFLLDLPALADALGEWLESRQDWRPNVLKFSLNILKDIKPRAMTRD-IDWGVPVPL 242

Query: 223 DPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
           +         +YVW DA+  YL+ +    +   D    K W  +      + +GKD + F
Sbjct: 243 EGWADNKFKKLYVWFDAVVGYLSASIEWAHRIGDPDAWKKWWTNPEAKSYYFMGKDNITF 302

Query: 271 HAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WPA +L                +L LP +V S  ++   G K S S G VI   + 
Sbjct: 303 HSQIWPAEMLGYRGLGSRGGTEGKLGDLQLPTEVVSSEYLTMSGSKFSSSKGVVIYVQDF 362

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + E G D LRYF+        D  +  D   +R N +LAN  GNL++R+VSM  K++  +
Sbjct: 363 LREFGPDPLRYFIAVAGPENNDTDFTWDEFVRRNNNELANSWGNLINRTVSMAAKNFGEV 422

Query: 377 IPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
               G   T+ D ++L +  +    + +N+++      + + + +V E + Y  AQ+PW+
Sbjct: 423 PDISGLELTDDDNALLDLAEKTFDIVADNIEHSRFRAGINEAMHVVGEANAYIAAQEPWK 482

Query: 436 LKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           L K     DR + VL+  ++V+    +LL  ++P  A K+ + L    E      +D+
Sbjct: 483 LAKDEDQRDRLAVVLHTALQVVSDCNVLLTPYLPHAAQKVHETLGRTGEWAAMPRIDE 540


>gi|169829851|ref|YP_001700009.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168994339|gb|ACA41879.1| Methionyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 551

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 126/541 (23%), Positives = 220/541 (40%), Gaps = 47/541 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R  + I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I+  A 
Sbjct: 7   RMTIVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAA 66

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               TT+   +     F+   + L  +YD + RT  + HH++ + L+ ++     +YK  
Sbjct: 67  QENTTTEAIANHYHEEFKKCFNKLGFTYDLYTRTDAEHHHESVKGLFLQLLANHFLYKKK 126

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQY------------------------YNAQHNPVQW 159
               Y   D+ +  D  V                                     N    
Sbjct: 127 IEQAYCETDQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKSCKICGNEPVI 186

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
            E E ++F  S +Q KL S+      E             ++  G+ D +++R   +   
Sbjct: 187 RETEHFYFTFSQFQGKLESFLSEAKAEKRWRDNALGLTERYLAEGVPDRAVTRDLPNGID 246

Query: 218 IKIPDDPQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPA---DLHVIGKDILRFHAI 273
           + +P      +YVWI+A+  Y   +  +      +    W       +V GKD + FH +
Sbjct: 247 VPVPGFDGKKIYVWIEAVAGYLTASLEWAKQHHMAIEDLWNEETISYYVHGKDNIPFHTV 306

Query: 274 YWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            WPA L+   +  LP  + S+ ++  +  K+S S    +    ++     D++RYFL   
Sbjct: 307 IWPAILMGLGVQALPTHIVSNEYLTLEKRKLSTSQNWAVWVPYILSRYDADSIRYFLTTN 366

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +         N +L    GN V+R++  I K +   +P      E D +I  
Sbjct: 367 APENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFASQVPQA----EVDSTIRK 422

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              ++  E+   ++     +AL  +   +   +RYFD Q+PW   K N +  +  L   V
Sbjct: 423 QTIQLFNEVGILIEGGRFKQALETIFEYIRGANRYFDEQQPWLQVKENVEAGNCTLATCV 482

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPR 509
            +I  L  LLQ F+P  A K+ D+L + DE    + ++        L KT +   P+F R
Sbjct: 483 YIIANLGQLLQPFLPFSAAKVRDMLGI-DEIMWHEQVE--------LPKTIEDITPLFER 533

Query: 510 F 510
            
Sbjct: 534 L 534


>gi|169763032|ref|XP_001727416.1| methionyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238488877|ref|XP_002375676.1| methionyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|83770444|dbj|BAE60577.1| unnamed protein product [Aspergillus oryzae]
 gi|220698064|gb|EED54404.1| methionyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 625

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 111/539 (20%), Positives = 217/539 (40%), Gaps = 42/539 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +    +++A+ Y N  PH+G+     + ADV AR+ R  G + L+  GTDE+G     
Sbjct: 12  SGKRNFLVTSALPYVNNVPHLGNLIGSTLSADVFARYGRGRGANTLYVCGTDEYGTTSEA 71

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    +TTK   D+      ++    +IS+D F RTT +      + ++ K+ D G + 
Sbjct: 72  RAIQENMTTKELCDKYYALHAEVYKWFNISFDIFGRTTTELQTKITQDIFLKLHDNGFLS 131

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG----- 164
           +   +  Y    +++  D  +             G          +P+  ++        
Sbjct: 132 EHVTTQLYCEEHKSFLADRFIQGECPHCKYIDAYGDQCDLCGQLLDPLDLIKPRCKLDGA 191

Query: 165 -YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTF 214
               R + +    L   +   +                     S++  GL++ S++R   
Sbjct: 192 TPVKRDTKHIFLKLDKLQPEIQAFFDESSAKGGWSQNGKDITSSWLTKGLQERSITRD-I 250

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + +P   + ++Y W DA   Y++ T         K    P D+     IGKD + 
Sbjct: 251 KWGTQVPLPGYEEKVIYSWFDACIGYVSITA-NYTDQWEKWWRNPEDVELYQFIGKDNVA 309

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           +H++ +P   +       K   + +  ++ ++G K SKS G  +      +  +  D  R
Sbjct: 310 YHSVMFPGTEIGTREKWLKVHHLSTTEYLTYEGGKFSKSRGIGVFGDSAKKTGIPADVWR 369

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTE 385
           Y+L+       D  ++ D      N  L   +GN VSR V  +  K+YD ++P   A+TE
Sbjct: 370 YYLLSHRPETGDSEFNWDLFISSNNNILLKNLGNFVSRVVKFVNSKNYDNIVPDYTAYTE 429

Query: 386 --SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
              D       + +L +  + +    I  A+  V+++  + + +  +     +L +  P 
Sbjct: 430 PAFDAW-KEEVNELLTQYIQQLDAVKIRAAIDTVLTISQKGNLFLQSNSLDNKLAENEPA 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           + + V+ + + +I  L+ LL  ++P+ A  I +IL         +     +KP   + K
Sbjct: 489 KCAAVIGLALNLIHLLSALLAPYMPETAASINEILRTEAIQIPDRWNADTVKPNHEIGK 547


>gi|146304661|ref|YP_001191977.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|189083262|sp|A4YI01|SYM_METS5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|145702911|gb|ABP96053.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 568

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 137/543 (25%), Positives = 241/543 (44%), Gaps = 42/543 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y  + PH+G+    I+ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KILVASAWPYVQSVPHLGNLIGSILSADVFARYARLKYGKENVVFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              GV+ K   DQ     R +  +  +IS+D++ RT  + H    +     +S    + +
Sbjct: 62  IKRGVSPKSLTDQAHEYDRQLFLNTWNISFDNYTRTESEVHKSFVKEFLLGVSKYIKVEE 121

Query: 122 GCYSGW---------YSLRDEAYYNDDEVYKGADGQYYNA--------------QHNPVQ 158
                            ++    Y   E  +G                         P  
Sbjct: 122 EELPYCERDKLFLPDRFVKGTCPYCGFEDARGDQCDRCGRLLTPSLLINPKCAICGTPPV 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + + +FF L  + + +  +        +P   +   +S+V  GLK  SL+R    WGI
Sbjct: 182 LRKTKHWFFDLRPFSEPIREWIT--SSQDMPENVKGTALSWVNEGLKPRSLTRDN-SWGI 238

Query: 219 K--IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
               P      +YVW +AL  Y   T   +    +  + K +  +      + IGKD + 
Sbjct: 239 PAPFPGAEGKTIYVWFEALLGYLSATLEYFQGRGETERWKEFWENGKVRSYYFIGKDNIP 298

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FHA+  PA LL++  N  LP  + +  +++++G+K SKS    I   E    + VD  R+
Sbjct: 299 FHAVILPAMLLASEKNYALPTVIAATEYLMYEGQKFSKSRKIGIWIDEAPLIMEVDYWRF 358

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+R     KD  +      + VN++L + +GNLV+R ++M+ + + G IP P    E D
Sbjct: 359 LLIRMRPEEKDMNFTWTEAIRIVNSELNDDVGNLVNRVITMVNRYFQGKIPEPKNLKEVD 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +LS     L ++    +   +      V++L  E + Y + + PW+  K++ + AS  
Sbjct: 419 MRLLSRVGETLDQVSFMFEKGKLKGGTELVLTLARETNAYLNEKAPWDKVKSDVEDASNT 478

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           L+V    IR +A++L   +P+ A  I+D L +      + +  + LKPG ++ K   P+F
Sbjct: 479 LFVASSAIRAIALMLYPVIPEKAKLIYDQLGLDITQERWDNAKEPLKPGHVVGKPA-PVF 537

Query: 508 PRF 510
            + 
Sbjct: 538 KKL 540


>gi|70994984|ref|XP_752268.1| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849903|gb|EAL90230.1| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159131024|gb|EDP56137.1| methionyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 651

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 116/553 (20%), Positives = 228/553 (41%), Gaps = 50/553 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQQHTEISQAIFKRLYDNGYLT 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWME----------- 161
           +      +     ++              Y+ A G   +   + +   +           
Sbjct: 131 EKTAEQPFCEAHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190

Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                  +     L   Q ++ ++   +  +   P   R+   +++K GLKD  ++R   
Sbjct: 191 TPVRRSTKHIHLLLDKLQPEIENWVLPAMEKGNWPKNSRDITKAWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P       ++YVW +A   Y + T      D  K    P ++     +GKD + 
Sbjct: 250 KWGVPVPLPGFENKVLYVWFEACIGYPSITA-NYTADWEKWWRNPEEVELYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L           + +  ++ ++G K SKS G  +      +  V  D  R
Sbjct: 309 FHSVIFPGCELGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGNNARQTGVPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L++      D  ++     +  N++L   +GNLV+R V +I   Y+  IP      ES
Sbjct: 369 YYLLKNRPETGDTQFEWRSFVECNNSELLAKLGNLVNRVVKLIAASYNSTIP-EFTVPES 427

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            +  L   + +L++  E M+   +   +   + L    + +  A +    L    PDRA+
Sbjct: 428 FQPNLDEITSLLRQYIEEMEGVHLRPGINTAMRLAEAGNGFIQANRLDNALIANEPDRAA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--------RLKPGF 497
            V+   + +I  L+ +   ++P  +  I + L          SLD+         LK G 
Sbjct: 488 AVVGTVINLIHLLSSVFAPYLPATSKSILEQLNAP--FGVIPSLDELKDGWKPVALKGGH 545

Query: 498 MLHKTFDPIFPRF 510
            + K    +F R 
Sbjct: 546 KIGKA-KYLFSRI 557


>gi|312601349|gb|ADQ90604.1| Methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 513

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 157/513 (30%), Positives = 270/513 (52%), Gaps = 12/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ A  
Sbjct: 3   KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ G Y
Sbjct: 63  ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +   +P
Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGNYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182

Query: 185 EFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTTT 242
           +FI   +  NE   +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL+  
Sbjct: 183 KFIFDSKIANELRQNFLQKGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242

Query: 243 GYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               + +  K   +  D    + V+GK+I RFH IYWP FL S N  LP  + +HG+++ 
Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGWLIT 302

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   N  
Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362

Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL+SR++++I+K +D  ++        +D S        L E  +N     I +A   V
Sbjct: 363 GNLISRTIALIVKKFDQPLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFKTV 422

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           I L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I + L
Sbjct: 423 IELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILEFL 480

Query: 478 FVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
            +  +N      LD+  K  F   K   P FPR
Sbjct: 481 GIRQKNFLLITKLDKFDKINFK--KLEKPFFPR 511


>gi|72080730|ref|YP_287788.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71913854|gb|AAZ53765.1| methionyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 513

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 157/513 (30%), Positives = 270/513 (52%), Gaps = 12/513 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI+T I Y + + HIGH Y  ++A V+  F ++ G +    TG+DEHGQKI++ A  
Sbjct: 3   KKCYITTPIYYASGRLHIGHLYTTVLAWVIRNFKKMSGFEARLFTGSDEHGQKISQLAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A +  + FVD+N  NF+ + +  +I YD F RTT   H +  + ++ K+ +   I+ G Y
Sbjct: 63  ANLEPQEFVDKNVENFKFLWEKFEIDYDYFQRTTNLNHKNFIKKIFLKMYEDNHIFNGEY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G YS+ DE + +  +        ++      ++ + E+ YFF +  +Q  L  +   +P
Sbjct: 123 QGLYSISDEEFLSQSQAVYQNGSYFHPVSGAKMELISEKSYFFPIKKFQKWLEDFLLENP 182

Query: 185 EFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYLTTT 242
           +FI   +  NE   +F++ GL+DLS++RK   WGI +        +YVW+DAL +YL+  
Sbjct: 183 KFIFDSKIANELRQNFLQRGLEDLSVTRKNLKWGIFLDQKFENQTIYVWLDALFSYLSVF 242

Query: 243 GYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               + +  K   +  D    + V+GK+I RFH IYWP FL S N  LP  + +HG+++ 
Sbjct: 243 KDQIDLENPKKSNFWTDSAQIIQVVGKEIARFHCIYWPIFLKSLNFRLPSIILTHGWLIT 302

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS GNVI+P++++++   + ++++ V +I    D  +D++ L+   N+   N  
Sbjct: 303 PEGKMSKSKGNVINPLDLLKKFDPEIIKFYFVSQINTKNDSVFDENLLENFYNSFFVNTF 362

Query: 359 GNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL+SR++++I+K +D  ++        +D S        L E  +N     I +A   V
Sbjct: 363 GNLISRTIALIVKKFDQPLLFEIADLDWTDISFYEKILLSLDEFCDNFDQLEIEKAFKTV 422

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           I L   ++ +FD ++ W  K  N  + +  L + +  I  + + L   +PK  N+I + L
Sbjct: 423 IELTKNLNGFFDIKQLWNQK--NLKKLAQGLILVLNGIYAITVFLSIAMPKKTNEILEFL 480

Query: 478 FVADENRCF-QSLDQRLKPGFMLHKTFDPIFPR 509
            +  +N      LD+  K  F   K   P FPR
Sbjct: 481 GIRQKNFLLITKLDKFDKINFK--KLEKPFFPR 511


>gi|296118240|ref|ZP_06836821.1| methionine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968798|gb|EFG82042.1| methionine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 628

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 143/528 (27%), Positives = 229/528 (43%), Gaps = 59/528 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E L ++ A  Y N   HIGH     + +DV ARF R+ G +VL  +GTDEHG  +   A 
Sbjct: 17  ESLVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGRNVLMVSGTDEHGTPLLVQAD 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +   D+ +R   +    L +SYD F RTT + H+   + L+  + D G + K  
Sbjct: 77  KEGISVRELADRYNRQIVEDLAGLGLSYDMFTRTTTRNHYAVAQELFTGLYDNGYMIKET 136

Query: 124 YSG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------Q 158
             G              +  E      +  +G        Q +P+              +
Sbjct: 137 MQGAISPSTGRTLPDRYIEGECPICHADGARGDQCDNCGNQLDPIDLINPVSKINGETPE 196

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           ++E E +   L A  D L  + ++  ++     + +  +          +++R   DWGI
Sbjct: 197 FVETEHFLLDLPALADVLTEWLKTREDWRPNTLKFSLNLIKDMR---PRAMTRD-IDWGI 252

Query: 219 KIPDDPQ-----YIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPA----DLHVIGKD 266
            IP +         +YVW DA+  Y        Y      +   FW        + +GKD
Sbjct: 253 PIPIEGWENNDAKKLYVWFDAVIGYLSSSIEWAYRSGNPDAWKDFWQDPEVRHYYFMGKD 312

Query: 267 ILRFHAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WPA                    L LP ++ S  F+   G K S S G VI 
Sbjct: 313 NITFHSQIWPAELLGYAGKGAKGGELHKYGELNLPTEIVSSEFLTMSGSKFSSSKGVVIY 372

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + ++E G DALRYF+        D  +  D   +R+N +LANG GNLV+R+VSM  K+
Sbjct: 373 VKDFLKEFGPDALRYFIAVAGPENTDTDFTWDEFVRRINNELANGWGNLVNRTVSMANKN 432

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   +P P   TE+D  ILS+    L    E ++      A+   + +V E + Y   Q+
Sbjct: 433 FG-EVPVPATLTEADTKILSLAEETLATAAEYLEASKFKAAITAAMHVVGETNAYIADQE 491

Query: 433 PWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           PW+L K     +R +TVL+  ++V+    ++L  F+P  A K+ + L 
Sbjct: 492 PWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPHTAQKVHETLG 539


>gi|15618046|ref|NP_224330.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|4376385|gb|AAD18275.1| Methionyl-tRNA Synthetase [Chlamydophila pneumoniae CWL029]
          Length = 551

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 131/510 (25%), Positives = 225/510 (44%), Gaps = 42/510 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE G  I   A 
Sbjct: 3   QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + +VD   +  +D  + L  + D F RTT   H +  +  + ++   G I    
Sbjct: 63  REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP--------------------VQ 158
               YS +++ +  D          G D    +   +                     + 
Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIGPKSKISGVELV 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +F L   +D LLS+        LP   R  V+ +++  ++  +++R    WGI
Sbjct: 183 KKETEHSYFLLDRMKDALLSFI---QGCYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LHVIGKDILRFH 271
            +PD P  + YVW DA   Y++ T              +FW  D    +  IGKD L FH
Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWKRFWLEDGVEYVQFIGKDNLPFH 297

Query: 272 AIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++ +PA  L   L   K   +    F L +G + SKS GN +D  + +    +D LRY L
Sbjct: 298 SVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN ++R ++   K+ YD +        +SD 
Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSDR 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
           + L    +++++  +  +   + +A + ++SL +  + YF+ Q PW+L K    +R   +
Sbjct: 418 AFLEEARQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P+ A  I++++
Sbjct: 478 LFCACYCQKLLALISYPIIPESAVAIWEMI 507


>gi|126650518|ref|ZP_01722741.1| methionyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592674|gb|EAZ86673.1| methionyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 544

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 116/536 (21%), Positives = 215/536 (40%), Gaps = 41/536 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I+  A   
Sbjct: 2   TIVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAAQE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             TT+   +     F    + L  +YD + RT  + HH++ + L+ ++     +YK    
Sbjct: 62  NTTTEAIANHYHEEFTKCFNELGFTYDLYTRTDAEHHHESVKGLFLQLLANNFLYKKKIE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWME 161
             Y   D+ +  D  V                                     N     E
Sbjct: 122 QAYCEADQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKCCKICGNEPVIRE 181

Query: 162 EEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIK 219
            E ++F  S +Q +L ++      E             ++  G+ D +++R   +   + 
Sbjct: 182 TEHFYFTFSQFQGRLETFLSEAKAEKRWRDNALGLTERYLAEGVPDRAVTRDLPNGIDVP 241

Query: 220 IPDDPQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPA---DLHVIGKDILRFHAIYW 275
           +P      +YVWI+A+  Y   +  +      +    W       +V GKD + FH + W
Sbjct: 242 VPGFEGKKIYVWIEAVAGYLTASLEWAKQHHMAIEDLWNEETISYYVHGKDNIPFHTVIW 301

Query: 276 PAFLLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA L+      LP  + S+ ++  +  K+S SL   +    ++     D++RYFL     
Sbjct: 302 PAILMGLGAKALPTHIVSNEYLTLEKRKLSTSLNWAVWVPYILSRYDADSIRYFLTTNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N +L    GN V+R++  I K +   +P      E D +I    
Sbjct: 362 ENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFANQVPQA----EVDSTIRKQT 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++  E+   ++     +AL  +   +   +RYFD Q+PW   K + +  +  L   V +
Sbjct: 418 IQLFNEVGILIEGGHFKQALESIFEYIRGANRYFDEQQPWLQVKEHVEAGNCTLATCVYI 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I  L  LL  F+P  A K+ ++L + +         ++++    + +   P+F R 
Sbjct: 478 IANLGQLLHPFLPFSAEKVRNMLGIDE-----MMWHEQVELPKTI-QGVTPLFERL 527


>gi|326772382|ref|ZP_08231667.1| methionine--tRNA ligase [Actinomyces viscosus C505]
 gi|326638515|gb|EGE39416.1| methionine--tRNA ligase [Actinomyces viscosus C505]
          Length = 615

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 141/549 (25%), Positives = 230/549 (41%), Gaps = 58/549 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA   G++ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADEEGLSA 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +        
Sbjct: 68  RELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVTRSAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P               +++E   
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLISPRSRINGETPEFVETTH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  L A    L ++ +             +    +   ++  +++R   DWGI +P   
Sbjct: 188 WFLDLPALAQALGAWLDEREASGTWRPNVIKFSQNLLGDIRPRAMTRD-IDWGIPVPGWE 246

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+  
Sbjct: 247 DQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRAWWNDPQALSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA LL  N              L LP +V S  F+  +G+K S S G VI   + +E  
Sbjct: 307 WPAELLGYNGQGAAGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLERY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +  + P P
Sbjct: 367 QADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKRFGQI-PEP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
               + D ++L         + + +       AL + + LV E ++Y    +P++LK  +
Sbjct: 426 AELQDIDRTLLDAVEAGFASVGDLIAQHRQKAALGEAMRLVGEANKYVADTQPFKLKGED 485

Query: 441 P---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKP 495
           P    R +TVL+   + +  L ++L  F+P  AN +  +L  +        +++   L P
Sbjct: 486 PATQARLATVLHTLAQAVTDLNLMLSPFLPHAANDVDRVLGGSGRIAPMPRIEEVAELDP 545

Query: 496 GFMLHKTFD 504
              L + FD
Sbjct: 546 EH-LPEAFD 553


>gi|19112378|ref|NP_595586.1| cytoplasmic methionine-tRNA ligase Mrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|51702161|sp|Q9UUF2|SYMC_SCHPO RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|5679723|emb|CAB51763.1| cytoplasmic methionine-tRNA ligase Mrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 782

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 102/550 (18%), Positives = 209/550 (38%), Gaps = 45/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
                + I++A+ Y N  PH+G+     + ADV AR+HR    + L+  GTDE+G     
Sbjct: 219 SNERNILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATET 278

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GV+ K   D+     +++ D  +I +D F RTT  +     + ++ K+ +   + 
Sbjct: 279 KALEEGVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMA 338

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
               +  Y    + Y  D  V            +G          N  + ++ +    R 
Sbjct: 339 IDTMTQLYCEVHQGYLADRYVEGTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRA 398

Query: 170 SAYQDKLL---------------SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           +  + +                    +S  E       R+   S++K GL+   ++R   
Sbjct: 399 TPVKRETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRD-L 457

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P +     ++YVW DA   Y++ T      +  K    P  +     +GKD + 
Sbjct: 458 KWGTPVPLEEFKGKVLYVWFDATIGYISITA-NYTDEWEKWWRNPEQVKLYQFMGKDNVP 516

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           FH + +P+ LL           + +  ++ ++  K SKS G  +      +  +     R
Sbjct: 517 FHTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSVWR 576

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-- 384
           Y+L+       D  +       R N++L   +GN V+R++      Y+G++P        
Sbjct: 577 YYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAKYNGLVPHYLTDPSV 636

Query: 385 ---ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
              +     +   + +L +    ++   +   L   + + +  ++Y    +   +     
Sbjct: 637 GAGKLKADFVKDVNALLAKYNAALEASKLREGLRLAMEISARGNQYLQDNRIDNKCYLYE 696

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             + +  +   + +I  LA +   ++P  +  I+  L  A       + +  L PG  + 
Sbjct: 697 RQKCADAIGYALNLIYLLAAIFYPYMPSTSTSIYKQLN-APAAAIPDTWELCLLPGHRIG 755

Query: 501 KTFDPIFPRF 510
           +  + +F R 
Sbjct: 756 EP-EYLFTRI 764


>gi|330790515|ref|XP_003283342.1| methionyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325086767|gb|EGC40152.1| methionyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 720

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 112/547 (20%), Positives = 210/547 (38%), Gaps = 57/547 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
                + I++A+ Y N  PH+G+     + ADV AR+ RL   +V++  GTDE+G     
Sbjct: 13  TGERNILITSALPYVNNVPHLGNLVGSTLSADVYARYCRLKNYNVIYIWGTDEYGTATET 72

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T K   D+  +  +++ +  +IS+D F              ++KK++D G   
Sbjct: 73  KALQEKCTPKEICDKYHKIHKEIYEWFNISFDKF-------------DIFKKLNDNGYTL 119

Query: 121 KGCYSG-WYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQH 154
                  +     + +  D  V                                      
Sbjct: 120 TQEIEQLYCEQTCKMFLADRYVEGICPHCQYEDARGDQCDKCTKLLNPTDLINPRCKMCS 179

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKT 213
            P      +  F  L   Q  +  + + +  +            ++V   LK   ++R  
Sbjct: 180 KPPIIKSTKHIFIDLPQLQSSVQEFVKRNSADGNWSENSIQITKTWVDGELKPRCITRD- 238

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDIL 268
             WG  +P +   + + YVW DA   Y++ T           K  P D   +  +GKD +
Sbjct: 239 LKWGTPVPLEEFKEKVFYVWFDAPIGYISITAEYTKDWEKWWKN-PEDVKLVQFMGKDNV 297

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +PA  +       L   + +  ++ ++  K SKS G  +         +  +  
Sbjct: 298 PFHTVIFPASQIGTKDSYTLLNNLSTTEYLNYETGKFSKSRGTGVFGDGAKNTGIPSEVW 357

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AF 383
           R++L+       D  +  D    + N +L N  GNLV+R + MI   Y G +PT      
Sbjct: 358 RFYLLSNRPESSDSVFSWDDFNAK-NNELLNNFGNLVNRVLKMISTTYQGTVPTIDNTKL 416

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E+D   ++  ++ L +  ++++   +   L   +++    + Y    KPWE    + +R
Sbjct: 417 NEADHKFINEVNQNLDQYFKSLEEISLKEGLKITMAISKLGNSYMQENKPWE---GDKER 473

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           ++ VL V   +I+ LA L + ++P L ++I   L V       +     +  G  L K  
Sbjct: 474 SALVLAVLTNLIKLLATLFEPYIPSLTDRIHQQLNVEPTKYSTKFDLHAIPGGHELSKQI 533

Query: 504 DPIFPRF 510
           +P+  + 
Sbjct: 534 EPLVKKI 540


>gi|159899304|ref|YP_001545551.1| methionyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892343|gb|ABX05423.1| methionyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 574

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 140/512 (27%), Positives = 226/512 (44%), Gaps = 39/512 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + ++ A  Y +   H+GH     + +DV AR+ RL G +VL  +GTD+HG  I   A 
Sbjct: 3   KNILVAVAWPYASGARHLGHVAGFGVPSDVFARYQRLVGNNVLMVSGTDDHGTPITVRAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D  +   R+    L +SYD F RT+ + H+   +  + ++ +KG I+   
Sbjct: 63  REGKTPREVTDFYNAEIRNNLRDLGLSYDLFTRTSTENHYQITQAFFTRLQEKGYIFAQE 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGY------- 165
             G YS  D+ +  D  V            +G        Q +PV  +E           
Sbjct: 123 MIGTYSEADKRFLPDRYVEGTCPHCGYTKARGDQCDNCGKQLDPVDLIEPRSTLSGATPV 182

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFDWGIKIPD 222
           F   + +   L ++ E   E+I         +     GL D   +R   +   WG+ IP 
Sbjct: 183 FKPTTHFFLNLPAFVERLREWIESQNHWRPNVKRFSLGLLDDVPARAITRDLTWGVPIPV 242

Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWP-----ADLHVIGKDILRFH 271
           +        +YVW DA+  YL+               + W         + +GKD + FH
Sbjct: 243 EGDEFDSKRIYVWFDAVIGYLSAAVEWSIKVGRPEAWRDWWLNSDARHYYFMGKDNIVFH 302

Query: 272 AIYWPAFLL-SANLPLPKKVFSHGF-ILHKGEKISKSL--GNVI-DPIEVIEEVGVDALR 326
           ++ WPA L+    L LP +V S  F  L  GEKIS S   GN I    E + +   D LR
Sbjct: 303 SVIWPAMLIGHGELELPYEVVSSEFLTLAGGEKISSSRAEGNSIPFVGEFLAQYDPDPLR 362

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFLV       D  +      +R N +L    GNLV+R +S+  K++  + PTP A T  
Sbjct: 363 YFLVIAGPETSDTEWSLGEFIRRNNEELVATWGNLVNRVLSITHKNFGHV-PTPQALTAE 421

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           DE+ L+      + + + ++       L   ++    V+ Y  +Q+PW++ KT+ +R  T
Sbjct: 422 DEAALATVRAAFETVGKELEQAHFKAGLIATMAAARSVNEYLASQEPWKVLKTDRERGGT 481

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +LYV ++ I  L  L   F+P  + K+ ++L 
Sbjct: 482 ILYVALQAINNLRTLFTPFLPFTSQKLHELLG 513


>gi|219847897|ref|YP_002462330.1| methionyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782858|sp|B8G6F7|SYM_CHLAD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219542156|gb|ACL23894.1| methionyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 600

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 143/586 (24%), Positives = 246/586 (41%), Gaps = 85/586 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E + ++ A  Y N   HIGH     + AD+ AR+HRL G  VL  +GTDEHG  I   A 
Sbjct: 3   EHILVAVAWPYANGPRHIGHVAGFGVPADIFARYHRLRGNRVLMVSGTDEHGTPITLVAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +   D+ ++   D    L +SYD F RTT   H+   + +++ + ++G I +  
Sbjct: 63  KEGTTPQAIADRYNKIIGDDLYNLGLSYDTFTRTTTANHYAVTQDIFRTLYERGYIIRQE 122

Query: 124 YSG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE---------- 162
             G              +         +  +G       +Q +P   +            
Sbjct: 123 TLGAFSATTGRTLPDRYIEGTCPLCGYDEARGDQCDNCGSQLDPTDLINPRSKVDGQPPV 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E +F  L A+ ++L  +      +      RN  ++F+K  LK  +++R   +WG+
Sbjct: 183 FKPTEHFFLDLPAFAEQLHDWINRQDHWR--PNVRNFSLNFLKD-LKPRAITRD-LEWGV 238

Query: 219 KIP-----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKD 266
            IP     +     +YVW DA+  YL+ +             + W  +      + +GKD
Sbjct: 239 PIPLPEYANRDDKKIYVWFDAVIGYLSASIEWAQNSGQPDAWREWWQNPDARHFYFMGKD 298

Query: 267 ILRFHAIYWPAFLLSAN-----------------LPLPKKVFSHGFILHKGEKISKSLGN 309
            + FH + WPA LL                    L LP  V S  F+  +G+K S S G 
Sbjct: 299 NIVFHTVIWPAMLLGYGAGGQFGADPGGKYDGIPLQLPYNVVSSEFLTMEGKKFSSSRGI 358

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VI   + +     DALRYFL       +D  +      +R N +L    GNLV+R++S +
Sbjct: 359 VIYVNDFLSRYDADALRYFLTIAGPENQDTDFTWAEFVRRNNDELVATWGNLVNRTLSNV 418

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            K++   +P PG  T  DE +L+  +  ++ + E +       ALA+ + L ++V+ Y  
Sbjct: 419 YKNFG-SVPQPGPLTPVDEQVLAEVTGGIETVGELLAAARFKAALAEAMRLAAQVNIYLS 477

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF----------- 478
            Q+PW++ K++ +RA+T+ YV +  +  L I+   F+P  + ++ + L            
Sbjct: 478 EQEPWKVIKSDHERAATIWYVALRCVDTLKIIFTPFLPFSSQRLHEYLGYNGYIAGPLTF 537

Query: 479 --------------VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
                           D +R     +  + P   + +   P+F + 
Sbjct: 538 REVTEANGRTHRVLTGDYDRWVGRWEPSVLPVGQVLRQPQPLFKKL 583


>gi|156937943|ref|YP_001435739.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|187647728|sp|A8ABN0|SYM_IGNH4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|156566927|gb|ABU82332.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 561

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 123/540 (22%), Positives = 220/540 (40%), Gaps = 41/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  + +A  Y N  PH+G+    ++ ADV ARF RL G DV+F +G+DEHG  I   A+ 
Sbjct: 3   KWIVGSAWPYVNTVPHLGNLIGSVLSADVFARFLRLMGEDVVFVSGSDEHGTPIEVEARK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  K   D+     + + +   IS+D++ RT    H +  R  + KI + G I+    
Sbjct: 63  RGVEPKELTDKVHEYVKKLFEKYLISFDNYTRTHNPVHMEFVRETFMKIYENGYIFTQEM 122

Query: 125 SGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
              Y  +D+ +  D              A G         +   +           +   
Sbjct: 123 VMPYCPKDKMFLPDRFTVGTCPYCGAPDARGDQCERCGKLLDPPDLVNPRCAFCGSRPVW 182

Query: 177 LSYYESHPEFI--------------LPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KI 220
                   +                LP   +   +++VK GL   S++R    WGI    
Sbjct: 183 RKTLHWFFDLPKAAEGLVEWLERSELPNNVKKFTLNWVKEGLTPRSVTRDN-KWGIPAPF 241

Query: 221 PDDPQYIMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPA----DLHVIGKDILRFHAIY 274
           P      +YVW +A+  YL+      + N      +FW       ++ IGKD + FH+I 
Sbjct: 242 PGAEGKTIYVWFEAVLGYLSAVKELDVKNGTNLFEEFWKDINSRPVYFIGKDNIPFHSII 301

Query: 275 WPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-GVDALRYFLVR 331
            PA L +     PLP  + +  +++++G+K SK     +   E +E V   D  R+ L+R
Sbjct: 302 LPALLKATGEEYPLPYNISATEYLMYEGQKFSKRRRVGVWIDEALEVVPNPDYWRFALIR 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +D  +      + VN++L + IGN   R ++ + + + G           DE + 
Sbjct: 362 MRPEERDTNFTWREFYRIVNSELNDDIGNFAHRVLTFVERRFGGS-----VRGRVDEEVK 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
              + + ++  + M    +  A   V+ +    ++Y + ++PW L K    + A  V+Y 
Sbjct: 417 KSIAELHEKYVKAMYKVKLKEASGLVLEMARLGNKYLNEKEPWRLLKEGKEEEARDVMYT 476

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + ++R++A+ L  F P  A +++ ++           L           K   P+F + 
Sbjct: 477 CLFILREVALHLAPFAPSAAEELWKMIGEPGSVHERGKLLTSGSEPAGEVKEPKPLFQKL 536


>gi|227497764|ref|ZP_03927950.1| methionine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832819|gb|EEH65202.1| methionine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 613

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 146/531 (27%), Positives = 223/531 (41%), Gaps = 51/531 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA   G++ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADEEGISA 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC------ 123
           +   D+N+R   +    L +SYD F RTT   H+   + +++ + D G + +        
Sbjct: 68  RELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQEMFRTVRDNGYMVEQVTRSAIS 127

Query: 124 -----------YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                        G   +        D+     +        +P   +  E   F  S +
Sbjct: 128 PSTGRTLPDRYIEGTCPICGTPGARGDQCDACGNQLDPTDLIDPHSRINGEVPEFVESNH 187

Query: 173 QDKLLSYYESHPEFILPIE-----RRNEVISFVKSGLKDLSLSRKT--FDWGIKIP---D 222
               L          L         R  VI F K+ L+++     T   DWGI +P   D
Sbjct: 188 WFLDLPALAEALGAWLDEREASGTWRPNVIRFSKNILEEIRPRAMTRDIDWGIPVPGWED 247

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIYW 275
            P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+  W
Sbjct: 248 QPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWRQWWNDPQALSYYFMGKDNIVFHSQIW 307

Query: 276 PAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA LL  N              L LP +V S  F+  +G K S S G VI   + +    
Sbjct: 308 PAELLGYNGQGDKGGHSGELGVLNLPTEVVSSEFLTMEGRKFSSSHGIVIYVRDFLARYQ 367

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +   IP PG
Sbjct: 368 ADALRYFISAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKRFG-EIPEPG 426

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E D  +L         + E +++     ALA+ + LV E ++Y    +P++LK    
Sbjct: 427 ELEEIDRVLLDSIETGFTTVGELIRHHRQKAALAEAMRLVGEANKYVADTEPFKLKSEEQ 486

Query: 442 -DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             R +T+L+   + +  L ++L  F+P  AN +  IL  A E      +++
Sbjct: 487 LPRLATILHTLAQAVADLNLMLSPFLPHAANDVDRILGGAGEIAPMPHIEE 537


>gi|33241458|ref|NP_876399.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33235966|gb|AAP98056.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|269303003|gb|ACZ33103.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 551

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 131/510 (25%), Positives = 225/510 (44%), Gaps = 42/510 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE G  I   A 
Sbjct: 3   QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + +VD   +  +D  + L  + D F RTT   H +  +  + ++   G I    
Sbjct: 63  REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP--------------------VQ 158
               YS +++ +  D          G D    +   +                     + 
Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIDPKSKISGVELV 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +F L   +D LLS+        LP   R  V+ +++  ++  +++R    WGI
Sbjct: 183 KKETEHSYFLLDRMKDALLSFI---QGCYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LHVIGKDILRFH 271
            +PD P  + YVW DA   Y++ T              +FW  D    +  IGKD L FH
Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWKRFWLEDGVEYVQFIGKDNLPFH 297

Query: 272 AIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++ +PA  L   L   K   +    F L +G + SKS GN +D  + +    +D LRY L
Sbjct: 298 SVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN ++R ++   K+ YD +        +SD 
Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSDR 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
           + L    +++++  +  +   + +A + ++SL +  + YF+ Q PW+L K    +R   +
Sbjct: 418 AFLEEARQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P+ A  I++++
Sbjct: 478 LFCACYCQKLLALISYPIIPESAVAIWEMI 507


>gi|172040240|ref|YP_001799954.1| methionyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|229470714|sp|B1VFI1|SYM_CORU7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|171851544|emb|CAQ04520.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 611

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 146/598 (24%), Positives = 253/598 (42%), Gaps = 98/598 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++  S A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  +   A 
Sbjct: 3   KRVLTSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMIGNDVLMVSGTDEHGTPLLVQAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   D+ +R   +    L +SYD F RTT + H+   + L++ +++ G + K  
Sbjct: 63  KENTTVRELADRYNRIIVEDLVGLGLSYDLFTRTTTRNHYAIVQELFRGLNENGYMLKQT 122

Query: 124 YSG-----------WYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------Q 158
             G              +            +G        Q +P               +
Sbjct: 123 TRGAVSPSTGRTLPDRYIEGTCPLCGATDARGDQCDNCGNQLDPADLIDPRSKINGETPE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +++ E +   L A  + L  + +   ++   + + +  +      ++  ++SR   DWG+
Sbjct: 183 FVDTEHFMLDLPALAEALEEWLKGRNDWRPNVLKFSLNLL---KDIRPRAMSRD-IDWGV 238

Query: 219 KIPDDPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKD 266
            +P +         +YVW DA+  YL+ +        D    + W  D      + +GKD
Sbjct: 239 PVPIEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRTGDPEAWRKWWNDPEAVSYYFMGKD 298

Query: 267 ILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            + FH+  WP  +L                 L LP +V S  F+   G K S S G VI 
Sbjct: 299 NITFHSQIWPGEMLGYAGKGSKGGEQGELGELNLPTEVVSSEFLTMSGSKFSSSKGVVIY 358

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             + ++E G DALRYF+        D  +  D   +R+N++LAN  GNLV+R+ SM  K+
Sbjct: 359 VRDFLKEFGPDALRYFIAVAGPENTDTDFTWDEFVRRINSELANEWGNLVNRTASMAHKN 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +   IP PG FT  D+++L    +    + + +Q       + + + + +  ++Y  AQ+
Sbjct: 419 FG-EIPQPGEFTAEDQALLDEAKQAYTVVGDALQLSKFKAGMTEAMRIAARANQYIAAQE 477

Query: 433 PWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------------- 477
           PW+L K     +R +TVLYV ++V+  +  L+  ++P  A K+F+ L             
Sbjct: 478 PWKLAKDETQRERLATVLYVALQVVSDVNTLMTPYLPFSAQKVFETLGGEGIWAAQPEIV 537

Query: 478 -------------FVADENRCF----------QSLDQR--LKPGFMLHKTFDPIFPRF 510
                         + +E   +          +++ QR  L PG  L K   P+F + 
Sbjct: 538 EVKDESPYTPVGVGLPEEGSSYPVIMGNYTEQKAIWQRTELAPGTALSKP-KPLFQKL 594


>gi|45201428|ref|NP_986998.1| AGR332Cp [Ashbya gossypii ATCC 10895]
 gi|44986362|gb|AAS54822.1| AGR332Cp [Ashbya gossypii ATCC 10895]
          Length = 750

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 108/546 (19%), Positives = 216/546 (39%), Gaps = 41/546 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    + +++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G     
Sbjct: 191 EGERNVLVTSALPYVNNVPHLGNIVGSVLSADIYARYCKARNYNTLFICGTDEYGTATET 250

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++ +   D+  +   D+    +I +D F RTT     +  + ++ K+++ G + 
Sbjct: 251 KALEEGISPRELCDKFHKIHADVYKWFNIGFDYFGRTTTAAQTEIAQDIFNKLNENGYLE 310

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ---------HNPVQWMEEE 163
           +      Y     A+  D  V        Y+ A G   +            NP   ++  
Sbjct: 311 EKTMKQLYCSEHNAFLADRYVEGECPKCQYEDARGDQCDKCGALLDPFELVNPRCKLDNT 370

Query: 164 GYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R S +    L+  E                    R    S++K GL+   ++R   
Sbjct: 371 KPEPRTSDHIFLSLNKLEKDIAQWVAESSEKGNWSKNSRTITNSWLKEGLEPRCITRDLV 430

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + +    + ++YVW DA   Y + T           K  P ++     +GKD + 
Sbjct: 431 -WGTPVPLEKYKEKVLYVWFDATIGYSSITANYTKEWERWWKN-PENVSLYQFMGKDNVP 488

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH + +P   L           + +  ++ ++G K SKS G  +      +  +  D  R
Sbjct: 489 FHTVIYPGSQLGTGDKWTMLHHLNTTEYLQYEGGKFSKSRGVGVFGNNAKDTGIPPDVWR 548

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-E 385
           Y+L        D  +    +  + N++L   +GN V+R V  +   Y+ ++P+       
Sbjct: 549 YYLASVRPETSDSQFSWKDMVTKNNSELLANLGNFVNRLVKFVNAKYNRVVPSFNVDNLP 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
             + +    + +L      M+     R L   ++L +  +++    K    L   +PD++
Sbjct: 609 GFKQLTDDINHILSNYVAEMELAREKRGLELAMALSARGNQFLQENKLDNSLFSQSPDKS 668

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + +I  +A ++  F+P+ A  I  +L            +  ++ G  ++K  +
Sbjct: 669 DAVVGVGLNIIYAVASVIAPFMPQTAETINRMLNAPALAIA-GEFNLIIQGGHNINKA-E 726

Query: 505 PIFPRF 510
            +F R 
Sbjct: 727 YLFQRI 732


>gi|15835658|ref|NP_300182.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752922|ref|NP_445193.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|12644036|sp|Q9Z959|SYM_CHLPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|7189567|gb|AAF38466.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978496|dbj|BAA98333.1| methionyl-tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 551

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 131/510 (25%), Positives = 225/510 (44%), Gaps = 42/510 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+ I++A+ Y N   H GH A   + ADV ARF RL G DVL+  G+DE G  I   A 
Sbjct: 3   QKVLITSALPYANGPLHFGHIAGVYLPADVYARFRRLLGDDVLYICGSDEFGIAITLNAD 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+  + +VD   +  +D  + L  + D F RTT   H +  +  + ++   G I    
Sbjct: 63  REGLGYQEYVDMYHKLHKDTFEKLGFALDFFSRTTNPFHAELVQDFYSQLKASGLIENRI 122

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP--------------------VQ 158
               YS +++ +  D          G D    +   +                     + 
Sbjct: 123 SEQLYSEQEQRFLADRYVEGTCPRCGFDHARGDECQSCGADYEAIDLIDPKSKISGVELV 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +F L   +D LLS+        LP   R  V+ +++  ++  +++R    WGI
Sbjct: 183 KKETEHSYFLLDRMKDALLSFI---QGCYLPDHVRKFVVDYIEH-VRSRAITRD-LSWGI 237

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD----LHVIGKDILRFH 271
            +PD P  + YVW DA   Y++ T              +FW  D    +  IGKD L FH
Sbjct: 238 PVPDFPGKVFYVWFDAPIGYISGTMEWAASQGNPDEWKRFWLEDGVEYVQFIGKDNLPFH 297

Query: 272 AIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           ++ +PA  L   L   K   +    F L +G + SKS GN +D  + +    +D LRY L
Sbjct: 298 SVVFPAMELGQKLDYKKVDALVVSEFYLLEGRQFSKSEGNYVDMDKFLSSYSLDKLRYVL 357

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDE 388
                   D  +     K R N++L    GN ++R ++   K+ YD +        +SD 
Sbjct: 358 AATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNHYDKLSYHSVVLEDSDR 417

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTV 447
           + L    +++++  +  +   + +A + ++SL +  + YF+ Q PW+L K    +R   +
Sbjct: 418 AFLEEVRQLVRDAEKCYREYSLRKATSVIMSLAALGNVYFNQQAPWKLLKEGTRERVEAI 477

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L+      + LA++    +P+ A  I++++
Sbjct: 478 LFCACYCQKLLALISYPIIPESAVAIWEMI 507


>gi|70607280|ref|YP_256150.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363442|sp|Q4J8M3|SYM_SULAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68567928|gb|AAY80857.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 571

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 140/549 (25%), Positives = 254/549 (46%), Gaps = 50/549 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y NA PH+G+    I+ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KVLVTSAWPYVNAVPHLGNLIGSILSADVFARYARLKYGKENVVFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +   +  K   DQ     + +  D   IS+D++ RT  + H +  R    K+     + +
Sbjct: 62  RKRNIEPKKLTDQAHAYDKKLFIDTWKISFDNYSRTESEVHKEFVRNFLVKLEKYIKVEE 121

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNAQHNP 156
                 Y  +D+ +  D  +                                      NP
Sbjct: 122 DEIP--YCEKDKLFLPDRFIKGVCPYCGFEDARGDQCDNCGRLLTPRSLVNAKCALCGNP 179

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
             +   + +FF LS + DK+  +  S      P   ++  +S+VK GL+  S++R    W
Sbjct: 180 PVFKVTKHWFFDLSEFGDKIRDWISSSSTM--PDNVKSVALSWVKEGLRPRSITRDN-MW 236

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---W----PADLHVIGKDI 267
           GI  P        +YVW +AL  YL+ T       G +  +   W        + IGKD 
Sbjct: 237 GIPAPFAGAENKTIYVWFEALLGYLSATVEYFKNLGKEEMWKEFWLYNDTKTYYFIGKDN 296

Query: 268 LRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + FHA+  PA L+++N    LP  + +  ++L++G+K SKS    +   E  + + V+  
Sbjct: 297 IPFHAVILPAMLMASNEKYNLPSVIAATEYLLYEGQKFSKSRKIGVWIDEADKLMDVEYW 356

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--F 383
           R+ L+R     KD  +      + VN +L + IGN  +R +SM+ + YDG++P+P    F
Sbjct: 357 RFILIRLRPEEKDTNFTWREALRIVNTELNDDIGNYANRVLSMVKRYYDGVVPSPKEAIF 416

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            + D++++++     + + E  +   I     +++ L    + Y + + PW L KTN + 
Sbjct: 417 NDEDKNLITLIKESPKRMGELFELGKIKAGSEEILKLARSGNLYLNNRAPWSLVKTNKEE 476

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQ-RLKPGFMLHK 501
           A+ VLY++V  +R LAI+L   +P  ++ ++  L +++ E+  + S    ++ PG  + +
Sbjct: 477 ANNVLYISVNSLRTLAIMLYPIMPTYSSNLYQQLGLSNLESETWDSAGSLKIMPGHKIGE 536

Query: 502 TFDPIFPRF 510
               +F + 
Sbjct: 537 -IRSLFKKI 544


>gi|108805422|ref|YP_645359.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|122975770|sp|Q1AST1|SYM_RUBXD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|108766665|gb|ABG05547.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 577

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 124/559 (22%), Positives = 229/559 (40%), Gaps = 58/559 (10%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M ER E+  +++A+ Y N   H+GH     + AD+  R+ R+ G DV++  GTDEHG  I
Sbjct: 7   MSERSERYLVTSALPYANGPLHVGHMVGAYLPADIFVRYLRMRGEDVVYVCGTDEHGVPI 66

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G + +  VD    + ++      IS+D+F RT+   H    ++ ++K+ + G 
Sbjct: 67  TLTAEREGKSPREVVDYWYAHMKETFARFSISFDNFSRTSTPLHAQNTQLFYRKLKEGGY 126

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHN--------------- 155
           I +      YS  +  +  D  V             G   +   +               
Sbjct: 127 ISEAESKQMYSPTEGRFLPDRYVEGTCPVCGYKEARGDQCDNCGSWYEAYELIEPHSKIT 186

Query: 156 --PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             PV+       +  L  +  +L  +  S   +  P++  N +IS ++ GL+   ++R  
Sbjct: 187 GGPVEVRTTTHLYLDLPKFAGRLKDWISSQRHWREPVK--NFIISMIEGGLERRPITRD- 243

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIG 264
             WG+ +P+        YVW DA   Y+++T           + + +  D     +H IG
Sbjct: 244 ISWGVPVPEPGFEDKRFYVWFDAPIGYVSSTQEWAERTGEPDRWREYWQDPGTRLIHFIG 303

Query: 265 KDILRFHAIYWPAFLL----SANLPL--PKKVFSHGFILHK--------GEKISKSLGNV 310
           KD   FH   WPA L+        P   P  V ++ F+  +          ++S S    
Sbjct: 304 KDNTVFHTTMWPAMLMGVAEDGEEPYILPYDVPANEFMNLEVPVEGERRAVQMSTSRNLA 363

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +   E ++    D LR++L   +    D  +     + RVN+DL   +GN ++R +S   
Sbjct: 364 VWLHEALDRFPADPLRFYLASTLPETGDVVFSWREFQSRVNSDLIGNLGNYINRVLSFTE 423

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           + + G +  P     + +        + +     M ++    A A++++L    +R+FDA
Sbjct: 424 RYFGGTLERPSRLPAAAQEAFEDFRALEESYGRKMLDERPREAFAELLALGRRANRFFDA 483

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             PW+ +K +P+RA   LY    ++  +A     +VP+   ++             + + 
Sbjct: 484 AAPWKTRKEDPERARADLYACCALLGSIAYHASPYVPEAMERLQGFFEGP-----VERIT 538

Query: 491 QRLKPGFMLHKTFDPIFPR 509
               PG        P+F R
Sbjct: 539 DLKPPGAYRSAGARPLFSR 557


>gi|170289693|ref|YP_001736509.1| methionyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|229558153|sp|B1L7J9|SYM_KORCO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|170173773|gb|ACB06826.1| methionyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 559

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 136/516 (26%), Positives = 238/516 (46%), Gaps = 40/516 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  +++A  Y NA PH+G   +++ +DV ARF R  G +V+F +G+DEHG  I   A   
Sbjct: 2   RWIVASAWPYINAVPHLGTLVQVLSSDVFARFLRKMGEEVVFVSGSDEHGTPIEIEAIRK 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+  +   D+       + +   ISYD++ RT    H +  R  + K+ ++G I++    
Sbjct: 62  GIAPRDLTDKMHAYITWLFESFGISYDNYTRTESDVHKEFVRDFYLKVYNEGHIFERETE 121

Query: 126 GWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------QWM 160
             Y  +DE +  D  V             G          NP               +  
Sbjct: 122 QLYCPKDEMFLPDRFVTGTCPYCGYERAHGDQCDRCGRLLNPTDLIDPKCSICGSVPEMR 181

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI-- 218
             + +FF L  + ++L  Y E +    LP   +   +S ++ GL+  SL+R    WGI  
Sbjct: 182 RTKHWFFDLPKFSERLRKYIEENEN--LPENAKTLSLSMIEEGLRPRSLTRDN-KWGIPA 238

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPA----DLHVIGKDILRFH 271
             P      +YVW++A+  Y++         G      +FW +     ++ IGKD + FH
Sbjct: 239 PFPGSEGKTIYVWMEAVLGYVSAVKEYFLKRGEAERFEEFWKSGDTRSVYFIGKDNIPFH 298

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            I +PA L+++     LP  V S  F+L++GEK SKS    I   E ++ +  D  R+++
Sbjct: 299 TIIFPALLMASGEGYALPFSVASTEFLLYEGEKFSKSERRGIWMDEALQLLPADYWRFYM 358

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      KD  +  +  + +VN +L + IGNLV R +S I   Y G IP+     E    
Sbjct: 359 IYMRPELKDASFSWEDFESKVNDELNDTIGNLVHRILSFIASRYSGQIPSV-ELDEEASG 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            L     + +EI EN+    +  AL  +I +    +++F+ ++PW+  ++N  RA + + 
Sbjct: 418 FLMRVREIGREIEENLMKIKLRDALRSLIEMARLGNKFFNNREPWKDFESNRGRADSTIL 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            +  +++ LA  +  F+P  A K++ +L +  E   
Sbjct: 478 ASYILLKILAFYMHIFMPSSAEKLWKMLGLEGEPED 513


>gi|254282433|ref|ZP_04957401.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678636|gb|EED34985.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 523

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 121/519 (23%), Positives = 215/519 (41%), Gaps = 46/519 (8%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I  D+  RF R  G    +    D HG  I  +A+  GVT +V +D+   +    +
Sbjct: 1   MLEQIQTDIWVRFQRSRGHQCHYVCADDAHGTAIMLSAERQGVTPEVLIDRVRSDHMASS 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV--- 141
           +   + +D+F  T    +      +++ +   G I        +      + +D  +   
Sbjct: 61  EGFLVEFDNFYSTHSPENQQWSERIFRDLESGGHIAVREVIQAFDEEKGLFLSDRFIKGT 120

Query: 142 --------YKGADGQYYNAQHNPVQWMEE--------------EGYFFRLSAYQDKLLSY 179
                     G + +   A + P   ++               +  FF+LS +Q+ L  +
Sbjct: 121 CPTCKTAGQYGDNCEACGATYTPADLIDPVSALSGSVPIEKASDHIFFQLSHFQELLEGW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             +     L     N++  ++ +GL+D  +SR +  +G +IP  P    YVW+DA   Y+
Sbjct: 181 VATDA---LQSAIANKLREWIDAGLQDWDISRDSPYFGFEIPGHPGKYFYVWLDAPIGYI 237

Query: 240 TTTGYLDNPDGSKAKFW---PAD---LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
                     G     +   P D    H IGKDI+ FH ++WPA L  A L +P  +F H
Sbjct: 238 AAWENHCQRTGEDFDSYWKSPTDTELYHFIGKDIINFHGLFWPAMLHCAGLRMPSAIFVH 297

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNA 352
           GF+   G K+SKS G  I     ++ +  + LRY+   +++    D   +     +RVN+
Sbjct: 298 GFLTVDGTKMSKSRGTFIMARTYLDHLDPEYLRYYFAAKLSSGVDDIDLNLSDFVQRVNS 357

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           DL   + N+ SR    + K +D  +       E    +++        I E+ +N   +R
Sbjct: 358 DLVGKVVNIASRCAGFLRKRFDNQLADTCDEPE----LVADFINQGSSIAEHYENLEFNR 413

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+  +I+L    ++Y D +KPW + K          V  V + + R L   L+  +P +A
Sbjct: 414 AMRDIIALADRANQYIDEKKPWVMAKEEGRESEVQAVCSVGINLFRILMTYLKPVLPGMA 473

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            +  D + +   +  +  LD  L     L+  F P+  R
Sbjct: 474 ERAEDFMQL---SLDWHQLDGPLT-DHGLNN-FKPLLQR 507


>gi|190575365|ref|YP_001973210.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|226710936|sp|B2FPT0|SYM_STRMK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|190013287|emb|CAQ46921.1| putative methionyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 692

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 128/541 (23%), Positives = 205/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  R+ G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    +       + K+   G I +   
Sbjct: 63  AGVTPETFIANIQASHERDFAAFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
           + +Y      +  D  V             G + +   A + P               + 
Sbjct: 123 AQFYDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCGATYAPTDLKEPRSVISGATPEM 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF +  +   L  +            +  E ++  + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDAFLREWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL++   L    G   +            H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLSSFQTLCGRIGEDFEAHLRAGTSTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYYAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SGGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGQL----AAQLPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+   ++L  E +RY D  KPW + K      +   V  
Sbjct: 418 QRFVDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P  A +     F+A     +  L Q L  G  +   + P+F R
Sbjct: 478 QGLNLFRVLVTALKPVLPATAAQ--AEAFLAAPVNDWTELAQPLL-GHRIT-DYTPLFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|269219273|ref|ZP_06163127.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211420|gb|EEZ77760.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 604

 Score =  289 bits (739), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 141/582 (24%), Positives = 229/582 (39%), Gaps = 85/582 (14%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA+  G T 
Sbjct: 10  VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMRGEDVLMVSGTDEHGTPILVAAEAEGKTP 69

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG------- 122
           K   D+N+R   +    L +SYD F RTT   H    + +++   D G +          
Sbjct: 70  KQLADENNRIIVEDLVALGLSYDLFTRTTSVNHEHVVQSMFEVCRDNGYMIVQQQNVAID 129

Query: 123 ----CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE--------------EG 164
                      +         E  +G        Q +P   ++               + 
Sbjct: 130 PVTGNTLPDRYIEGTCPICGSEGARGDQCDVCGNQLDPQDLIDPVSKVSGQAPRFEVTDH 189

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           YF  + A  +KL  + +                  +   ++  +++R    WGI +P   
Sbjct: 190 YFLDVPALAEKLGEWLDDVEATGEWRPNVIVFSKHLLEDVRPRAMTRD-ISWGIPVPGWE 248

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPD-------GSKAKFWPAD-----LHVIGKDILR 269
           D P   +YVW DA+  YL+ +                  + W  D      + +GKD + 
Sbjct: 249 DQPNKRLYVWFDAVIGYLSASVEWARRRAAAGKGTAEDWRKWWNDPEALSYYFMGKDNIV 308

Query: 270 FHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL+                L LP +V +  F+  +G+K S S   VI   +
Sbjct: 309 FHSQIWPAELLAYNGEGSRGGEPGKLGRLNLPTQVVASEFLTMEGKKFSSSKNVVIYVRD 368

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+     DALRYF+        D  +      +R N++L  G GNLV+R+ +MI K++  
Sbjct: 369 VLSRYQPDALRYFISIAGPESSDADFTWAEFVRRNNSELVAGWGNLVNRTAAMIAKNFG- 427

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            IPTPG   E D  +L         + E++ N     AL +++ LV E + Y    +P++
Sbjct: 428 EIPTPGQPEEVDAELLDAVRNGFATVGESIANHGQRAALTEIMRLVGEANAYVAKTEPFK 487

Query: 436 LKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-- 492
           LK     +R +TVL+   + +  L  ++  F+P  +N I  +     +      L++   
Sbjct: 488 LKAPEQRERLATVLHTLAQAVWDLNTMMSVFLPHSSNAIDRVFGGKGDLAPMPRLEEAED 547

Query: 493 ------------------------LKPGFMLHKTFDPIFPRF 510
                                   + PG  + K   P+F + 
Sbjct: 548 LDGGDPYPIITGDYSSVRPWAPSEVAPGTPVAKP-TPVFAKL 588


>gi|164663049|ref|XP_001732646.1| hypothetical protein MGL_0421 [Malassezia globosa CBS 7966]
 gi|159106549|gb|EDP45432.1| hypothetical protein MGL_0421 [Malassezia globosa CBS 7966]
          Length = 712

 Score =  289 bits (739), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 104/553 (18%), Positives = 202/553 (36%), Gaps = 56/553 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + E + +++A+ Y N  PH+G+     + ADV AR+ R    + L+  GTDE+G      
Sbjct: 41  DEENVLVTSALPYVNNVPHLGNIIGSTLSADVFARYARTQNKNTLYICGTDEYGTATETK 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV+ +   D+       + +   I +D F RTT  R  +  + +++K+ + G   +
Sbjct: 101 ALEDGVSPQALCDKYHALHAQVYEWFQIGFDYFGRTTTPRQTEIAQDVFRKLYENGYFEE 160

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLS 170
                 Y    E +  D  V            +G          + V+  E +    + +
Sbjct: 161 RVMRQLYCASCERFLADRYVNGICPKCDYDDARGDQCDKCGQLLDAVELKEPKCKLCKGT 220

Query: 171 AYQDKLLSY-YESHPEFILPIERRNEV--------------ISFVKSGLKDLSLSRKTFD 215
             +                     +E+               S+ K GL+  S+SR    
Sbjct: 221 PQERDSKHMFLRIDALQPQTEAWASEMSKKGKWSSNGTFITESWFKEGLRPFSVSRD-LK 279

Query: 216 WGIKI--PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDILRF 270
           WG+ +        ++YVW DA   Y + T    +      K  P  +     +GKD +RF
Sbjct: 280 WGVPVPLQGYEDKVLYVWFDAPIGYPSITANYTSEWEKWWKN-PEHVRLYQFMGKDNVRF 338

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRY 327
           H + +P+ L+    P      + +  ++ ++G K SKS    +      +  V     RY
Sbjct: 339 HTVIFPSCLIGTKDPWTMLYHINTAEYLQYEGGKFSKSRNIGVFGDRAKDIGVSPSVWRY 398

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP------- 380
           +L+       D  +       R N++L   +GN V+R ++ + K    +   P       
Sbjct: 399 YLLSTRPESSDSQFVWHDFVTRNNSELLKNLGNFVNRILTFMKKYEGRLPEAPQGLRLGT 458

Query: 381 ----------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                       + +     ++  + +L +  + M    +   L  ++ L +  +     
Sbjct: 459 DGPLSTTGDGTVWGDLVAKFVADVNAILAKYVDFMDVGKLRAGLNTMMELSARGNLLLTE 518

Query: 431 Q-KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-FQS 488
                 L      +   V+ +   +I  L  L+  F+P  ++++ + L          Q+
Sbjct: 519 AGLDNTLFAEQRAKCDAVILLATNLIWVLTALVHPFMPLTSDQMLEQLNAPPRALPKEQA 578

Query: 489 LDQRLKPGFMLHK 501
               L PG M+ K
Sbjct: 579 FALDLLPGHMVGK 591


>gi|320095639|ref|ZP_08027299.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977434|gb|EFW09117.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 613

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 138/538 (25%), Positives = 225/538 (41%), Gaps = 53/538 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 3   RILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADG 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +   
Sbjct: 63  EGVSARELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQVT 122

Query: 125 S-----------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------W 159
                           +         E  +G        Q +P +              +
Sbjct: 123 RAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDNCGNQLDPTELIDPRSRINGETPEF 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +E   YF  L A    L  + +             +        ++  +++R   DWGI 
Sbjct: 183 VESTHYFLDLPALARALSDWLDERERSGTWRPNVIKFSKNFLEDIRPRAMTRD-IDWGIP 241

Query: 220 IP---DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILR 269
           +P   D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + 
Sbjct: 242 VPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWRKWWNDPDALSYYFMGKDNIV 301

Query: 270 FHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           FH+  WPA LL  N              L LP +V S  F+  +G+K S S G VI   +
Sbjct: 302 FHSQIWPAELLGYNGQGDRGGRPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVRD 361

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +E    DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +  
Sbjct: 362 FLERYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASMIAKKFG- 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            IP PG   + D ++L         +   +++     AL++ + LV E ++Y     P++
Sbjct: 421 EIPAPGELEDIDRALLDAIEAGFATVGGLIRHHRQKAALSEAMRLVGEANKYVTDTAPFK 480

Query: 436 LKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           LK     +R +TVL+   + +  L ++L  F+P  AN +  ++           +++ 
Sbjct: 481 LKAPEQRERLATVLWTLAQAVADLNLMLSPFLPHAANDVDRVMGGEGRIAPMPVIEEA 538


>gi|187918449|ref|YP_001884012.1| methionyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|226710894|sp|B2S0T6|SYM_BORHD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119861297|gb|AAX17092.1| methionyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 729

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 114/511 (22%), Positives = 218/511 (42%), Gaps = 37/511 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+ G++ L+  GTDE+G      A 
Sbjct: 2   KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT KRH +T + L+ K+   G   +  
Sbjct: 62  IEKTTPEELCNKYYEIHKSIYEWFNIKFDIFGRTTNKRHKETVQDLFLKLEKNGYTTEKE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              ++  +D+ +  D  V           KG   +  +   +P   +  +          
Sbjct: 122 SEQFFCKQDQMFLADRYVTGECPNCGNNAKGDQCENCSKLLSPTDLINPKCIICKNIPII 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   +      + I   N   +         F++ GLK+ +++R    WGI
Sbjct: 182 KTTKHIYIDLPKIKDELSHWMQITELNTNWNTNAIKITNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH + 
Sbjct: 241 PVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNEETNLVQFIGKDNILFHTVI 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P+  L +        K+ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPSIALGSKENWTMLSKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +  D   +RVN++L     NLV+R ++   K +   I       +  + I 
Sbjct: 361 NRPEKSDFQFMWDDFMERVNSELIGNFSNLVNRVLTFYKKFFGDQIDKIEIKEDFWQEIN 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + L       +   +  AL +++ +    ++ F  ++PW+ K + P +   +L   
Sbjct: 421 LKYDKTL----NFFKQVELKSALKEILDISRTGNKIFQDKEPWKTKDSTPQKTKELLLNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +IR L+IL+  F+P  ++KI      + E
Sbjct: 477 IYLIRDLSILISPFIPHTSDKIRRFFGNSYE 507


>gi|289582256|ref|YP_003480722.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531809|gb|ADD06160.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 717

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 117/546 (21%), Positives = 222/546 (40%), Gaps = 52/546 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++  + Y N   HIGH    I AD  +R     G +  + +G+D HG  +A  A+ 
Sbjct: 16  RPAVVTCGLPYANGDLHIGHLRGYIGADAFSRALETLGQETAYVSGSDMHGTPVAVNAEE 75

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+ + F  +    + +     ++ +D++  T ++ + +  + + + + D+G +Y+   
Sbjct: 76  EGVSPEEFAMEWHEQYEETFPKFNVDFDNYGHTHDETNTEFTQEIVRTLDDEGYVYEKEI 135

Query: 125 SGWYSLRDEAYYNDDEVYKGA-----------DGQYYNAQHNP--------------VQW 159
              Y    + Y  D  V                 +       P               ++
Sbjct: 136 QVAYDPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEVEDPTSTITGNAAEY 195

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    FF +S + D L  +             RN+   +++ GL+D  L+R   +WGI 
Sbjct: 196 RDRTHKFFEVSEFADYLTEFL---DGLEGTSNARNQPRQWIEEGLQDWCLTRD-MEWGID 251

Query: 220 IPD-----DPQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD---LHVIGKDI 267
            P+         ++YVW+DA   Y+         +   +    + W  D   +HVIG+DI
Sbjct: 252 YPNGDSETTEDIVLYVWVDAPVEYIASTKQYADRVGTDEYDWERVWKDDGDIVHVIGRDI 311

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           ++ H I+WPA L  A    P+ V + GFI   G+ +S S    I   E +EE    D LR
Sbjct: 312 IQHHTIFWPAMLEGAGYNKPRAVAATGFITINGKGLSTSRNRAIWAKEYLEEGFHPDLLR 371

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L       +D  +  D  +++VN +L   +GN   RS+    ++Y+G         E+
Sbjct: 372 YYLTTTGGLQQDVDFSWDAFQEKVNGELVGTVGNFWYRSLLFAYRNYEGTP-------EA 424

Query: 387 D--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           D  E +       + + RE + +  +         L    + Y    +PW+L   +P++A
Sbjct: 425 DVSEEVAERIKGAIGQTREAVNDYSLRGIGQAATQLAQFGNEYIQRNEPWKLTDDDPEQA 484

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           + V+   V++ + + +LL+   P  A  +++ L    +       D    P     +  +
Sbjct: 485 AQVIRDCVQIAKAVGVLLEPIAPDKAQALWEQLGEDGDVSDVHLEDALESPPRNFDEPGE 544

Query: 505 PIFPRF 510
            +F + 
Sbjct: 545 -LFEKI 549


>gi|254522917|ref|ZP_05134972.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720508|gb|EED39033.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 693

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 127/541 (23%), Positives = 204/541 (37%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  R+ G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T + F+               +++D +  T    +       + K+   G I +   
Sbjct: 63  AGITPETFIANIQAGHERDFAAFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
           + +Y      +  D  V             G + +   A + P               + 
Sbjct: 123 AQFYDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCGATYAPTDLKEPRSVISGATPEM 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF +  +   L  +            +  E ++  + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDAFLRDWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFQ 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLD------NPDGSKAKFWPADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL++   L            +A       H IGKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLSSFQTLCGKLGEDFESHLRAGTSTELHHFIGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYYAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG +    A    D +  
Sbjct: 362 SGGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGQL----AAQLPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+   ++L  E +RY D  KPW + K      +   V  
Sbjct: 418 QRFVDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P  A +     F+A     +  L Q L  G  +   + P+F R
Sbjct: 478 QGLNLFRVLVTALKPVLPATAAQ--AEAFLAAPVDDWTDLVQPLL-GHRIT-DYTPLFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|71018895|ref|XP_759678.1| hypothetical protein UM03531.1 [Ustilago maydis 521]
 gi|46099436|gb|EAK84669.1| hypothetical protein UM03531.1 [Ustilago maydis 521]
          Length = 834

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 109/555 (19%), Positives = 210/555 (37%), Gaps = 62/555 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + +++A+ Y N  PH+G+     + ADV AR+ R    + L+  GTDE+G      A 
Sbjct: 149 PNILVTSALPYVNNVPHLGNIIGSTLSADVYARYSRTRNRNTLYICGTDEYGTATETKAL 208

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+       + +   I +D F RTT  +  +  + ++ K+   G + +  
Sbjct: 209 EDGVTPQELCDKYHAQHAQVYEWFQIGFDHFGRTTTPKQTEIAQDVFLKLYKNGYLEERT 268

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +  +  +   +  D  V            +G         ++ V+ ++           
Sbjct: 269 MTQLFCQKCVRFLADRYVEGECPRCGYDDARGDQCDKCGQLYDAVELVKPRCKLCSSPPV 328

Query: 173 QDKLLSY-YESHPEFILPIERRNEV--------------ISFVKSGLKDLSLSRKTFDWG 217
           Q               L  +   E                S+ K GLK  SL+R    WG
Sbjct: 329 QKDSSHMFIRIDELQPLTEKWAREQAQKGGWSSNGKLITESWFKEGLKPFSLTRD-LKWG 387

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
           + +P       ++YVW DA   Y + T    +      K  P ++     +GKD +RFH 
Sbjct: 388 VPVPIKGMEDKVLYVWFDAPIGYPSITANYTDDWEKWWKN-PDNVKLYQFMGKDNVRFHT 446

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFL 329
           + +P+ L+ +  P      + +  ++ ++G K SKS    +   +  +  +     RY+L
Sbjct: 447 VIFPSCLIGSKDPYTLLHHINTTEYLQYEGGKFSKSRNIGVFGDKARDLGLSASVWRYYL 506

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--- 386
           +       D  +       R N++L   +GN  +R ++  +K YD +IP   + ++    
Sbjct: 507 LANRPETADSQFAWRDFIARNNSELLANLGNFCNRVLTF-MKKYDYVIPAIPSDSKLRSY 565

Query: 387 ---------------DESILSVCSR----VLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
                            S++S  +R    +L +   +M+   I   L  +++L +  + +
Sbjct: 566 KDGPVAAAAEGADDASSSVISRFARDVNLILGQYISSMEAVKIRSGLQHMMALSARGNLF 625

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                    L   +  R   V+ V + +I  L+ L+  F+P+ ++ I   L         
Sbjct: 626 LVESHFDNTLFTESRARCDEVMIVALNLIWLLSALIHPFMPETSDAILKQLDAPPRAVPE 685

Query: 487 Q-SLDQRLKPGFMLH 500
                  L PG  + 
Sbjct: 686 DGKFYLDLLPGHKIG 700


>gi|323308936|gb|EGA62167.1| Msm1p [Saccharomyces cerevisiae FostersO]
          Length = 575

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 167/523 (31%), Positives = 259/523 (49%), Gaps = 49/523 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G  
Sbjct: 17  VTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGFD 76

Query: 69  -TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + GW
Sbjct: 77  QPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHVENVVKLWELCLKNGYIYMGEHKGW 136

Query: 128 YSLRDEAYYNDDEVYKGA---DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           YS+ DE +Y + +V K     D        N V +  E  YFFRLS +  K++ +   +P
Sbjct: 137 YSISDETFYPESKVIKDPKNDDKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKNP 196

Query: 185 EFILPIERRNEVISFVKSG--LKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY-- 238
           +FI P  +R++++  +++G  L DLS+SR      WGI  P+DP   +YVW DAL NY  
Sbjct: 197 DFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYLS 256

Query: 239 ----------------LTTTGYLDNPDGSKAKFWP-----ADLHVIGKDILRFHAIYWPA 277
                                   N  G     +P       +HVIGKDI +FH +YWP+
Sbjct: 257 SIGGIPSILSNATEVVSRHHSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWPS 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           FLL+  LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      +
Sbjct: 317 FLLATGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLEE 376

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS--------------MILKDYDGMIPTPGAF 383
           DG + +  L +     L +  GNL++R                      +  +       
Sbjct: 377 DGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPTV 435

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +E  E++  + ++  +   E +      + L  V S++++ +      KPWE      D+
Sbjct: 436 SERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWER---ELDQ 492

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             T++++ +E  R L+IL Q+ +P L+    D + V+ E R  
Sbjct: 493 QDTIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKRTI 535


>gi|255261576|ref|ZP_05340918.1| methionyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255103911|gb|EET46585.1| methionyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 570

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 111/540 (20%), Positives = 217/540 (40%), Gaps = 49/540 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ ARF R    +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLFARFQRARRNEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++   +    +    +++D+G I +   
Sbjct: 63  AGKPVAEYCAEMWTLQAEIAQGFRLSFDHFGRSSSDENRTLTQHFAGRLADEGLIEETVE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP---------------VQ 158
           +  YS+ D  +  D  +            +G        Q +P               ++
Sbjct: 123 TQVYSIADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPADLINPYSTISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +    + S  +D+L ++  S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 PRETKHLHLKQSKVKDQLDNWISSKKDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +             + YVW DA   Y+  +             ++W  D          
Sbjct: 242 PVKRGADDWPGMEGKVFYVWFDAPIEYIACSQEWVAAGKGDDWERWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA ++ +N P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATIMGSNEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   IP 
Sbjct: 362 LPSDYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRVTKFTRSKFSEEIPD 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +ES++   +  ++     M+   I ++  ++ ++    + Y     PW   KT
Sbjct: 422 GGKNGPEEESLIQEITTRVRAYEGYMEAMEIRKSANELRAIWVAGNEYLQTVAPWSTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
            P++A+  + + + +IR  A+L   F+P  + ++   +   ++       +    L  G 
Sbjct: 482 APEQAAAQIRLALNLIRVYAVLSAPFIPDASAELMQAMQTDNDAWPDDVAAAMTALPAGH 541


>gi|227830547|ref|YP_002832327.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579360|ref|YP_002837758.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581880|ref|YP_002840279.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|238620010|ref|YP_002914836.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|227456995|gb|ACP35682.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010074|gb|ACP45836.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012596|gb|ACP48357.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|238381080|gb|ACR42168.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 631

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 132/546 (24%), Positives = 242/546 (44%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 60  KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    + +
Sbjct: 120 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 179

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYF 166
                    +             Y   E  +G                NP   +  +   
Sbjct: 180 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 239

Query: 167 FRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           F+ S +    LS +             +P   ++  + +V  GLK  S++R    WGI  
Sbjct: 240 FKKSKHWFFDLSEFNEKIRSWISSSNEMPDNVKSVALGWVSEGLKPRSITRDN-KWGIPA 298

Query: 221 PD--DPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADL---HVIGKDILRFH 271
           P        +YVW +AL  Y++               K  ++  D+   + IGKD + FH
Sbjct: 299 PFIGAEDKSIYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKDNIPFH 358

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +  PA L+++     LP  + +  ++L++G+K SKS    +   E  E + V+  R+ L
Sbjct: 359 VVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWIDEAPELMDVEYWRFVL 418

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P     A  ++D
Sbjct: 419 IRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRSDALDDND 478

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RAST 446
           + I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K   +   + 
Sbjct: 479 KKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAGKEVELNN 538

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR-LKPGFMLHKTFD 504
            LY+ V  ++ +AILL   +P  A +I+D+L + + EN  +    +  +  G  + K   
Sbjct: 539 TLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGNIENEKWDIASKLSINYGHKIGK-VK 597

Query: 505 PIFPRF 510
            +F + 
Sbjct: 598 VLFKKL 603


>gi|229585107|ref|YP_002843609.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228020157|gb|ACP55564.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 631

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 132/546 (24%), Positives = 242/546 (44%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 60  KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    + +
Sbjct: 120 IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYVKVSE 179

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYF 166
                    +             Y   E  +G                NP   +  +   
Sbjct: 180 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 239

Query: 167 FRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           F+ S +    LS +             +P   ++  + +V  GLK  S++R    WGI  
Sbjct: 240 FKKSKHWFFDLSEFNEKIRSWISSSNEMPDNVKSVALGWVSEGLKPRSITRDN-KWGIPA 298

Query: 221 PD--DPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADL---HVIGKDILRFH 271
           P        +YVW +AL  Y++               K  ++  D+   + IGKD + FH
Sbjct: 299 PFIGAEDKSIYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKDNIPFH 358

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +  PA L+++     LP  + +  ++L++G+K SKS    +   E  E + V+  R+ L
Sbjct: 359 VVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWIDEAPELMDVEYWRFVL 418

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P     A  ++D
Sbjct: 419 IRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRSDALDDND 478

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RAST 446
           + I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K   +   + 
Sbjct: 479 KKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAGKEVELNN 538

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR-LKPGFMLHKTFD 504
            LY+ V  ++ +AILL   +P  A +I+D+L + + EN  +    +  +  G  + K   
Sbjct: 539 TLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGNIENEKWDIASKLSINYGHKIGK-VK 597

Query: 505 PIFPRF 510
            +F + 
Sbjct: 598 VLFKKL 603


>gi|297572126|ref|YP_003697900.1| methionyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932473|gb|ADH93281.1| methionyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 601

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 149/587 (25%), Positives = 233/587 (39%), Gaps = 85/587 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+  + A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA  
Sbjct: 2   KILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+N+R   +    L +SYD F RTT + H D  + L++   D G +     
Sbjct: 62  EGVTPQQLADKNNRIIAEDLVNLGLSYDLFTRTTTQNHVDVVQHLFEGCRDNGYMIVEEQ 121

Query: 125 SGWYSLRDEAYYNDDEVY--------KGADGQYYNAQHNPVQWME--------------- 161
                 +      D  +          GA G   +A  N +   +               
Sbjct: 122 LVAIDPKTGNTLPDRFIEGTCPICGAAGARGDQCDACGNQLDPQDLIDPVSKVSGLAPNF 181

Query: 162 --EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E YF  L A  D L S+ +   E              +   ++  ++SR    WGI 
Sbjct: 182 TSTEHYFLDLPALADALGSWLDEVEEDGKWRPNVISFSKHLLDDVRPRAMSRD-ISWGIP 240

Query: 220 IP---DDPQYIMYVWIDALTNYLTTTGYLDNPD-------GSKAKFWPAD-----LHVIG 264
           +P   D P   +YVW DA+  YL+ +                  + W  +      + +G
Sbjct: 241 VPGWEDKPNKRLYVWFDAVVGYLSASIEWARRRAAAGEGSPEDWREWWTNPEALSYYFMG 300

Query: 265 KDILRFHAIYWPAFLL--------------SANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           KD + FH+  WPA LL                 L LP +V +  F+  +G+K S S   V
Sbjct: 301 KDNIVFHSQIWPAELLAYNGTGSKGGQARDFGTLNLPTQVVASEFLTMEGKKFSSSKNVV 360

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I   +V+     DALRYF+        D  +      +R N++L    GNLV+R+ +MI 
Sbjct: 361 IYVRDVLSRYQADALRYFISIAGPETSDSDFTWSEFVRRNNSELVAAWGNLVNRTGAMIA 420

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           K++   IPTPG   + D  +L         +   +       AL +++ LV E + Y   
Sbjct: 421 KNFG-EIPTPGESEQIDTDLLDAVRGGFDTVGGLIGAHQQRAALTEIMRLVGEANTYVTR 479

Query: 431 QKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +P++LK     +R +TVL   V+ +  L  ++  F+P  +N I  +L  A +      L
Sbjct: 480 TEPFKLKAPEQRERLATVLNTLVQAVSDLNTMMSVFLPHSSNAIDQVLGGAGDIAPMPHL 539

Query: 490 DQ--------------------------RLKPGFMLHKTFDPIFPRF 510
            +                           + PG  + K   P+F + 
Sbjct: 540 VEVTDLDTDYPYPIITGDYSSVRAWEPRDVVPGTPIAKP-KPVFAKL 585


>gi|85705165|ref|ZP_01036265.1| methionyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670487|gb|EAQ25348.1| methionyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 570

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 117/553 (21%), Positives = 227/553 (41%), Gaps = 50/553 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLFARYCRARGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++  ++H   +   K++ D+G I +   
Sbjct: 63  AGQPVAEYCAEMHTVQAEIARGFRLSFDHFGRSSSSQNHRLTQHFAKRLHDQGLIREVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
           +  YS  D  Y  D  +            +G        Q +PV               +
Sbjct: 123 TQMYSPTDGRYLPDRYIEGTCPNCGYDSARGDQCDNCTKQLDPVDLINPRSVISGATDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  +   S  +D+L  + +S   + +      +       GL+D  ++R   DWGI
Sbjct: 183 MRVTKHLYLCQSQMKDELEKWIDSKTGWPVLTTSIAKKWLNDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    +        + YVW DA   Y+       +        ++W  D          
Sbjct: 242 PVKRGDEDWPGMEGKVFYVWFDAPIEYIACAQEWVDAGKGTDWERWWRTDKGAEDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATILGSREPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P+
Sbjct: 362 LPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNFVSRVTKFCRSKFGETVPS 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
              +   + ++++  +  +++   +M+   + ++ A + ++  E + Y     PW   K 
Sbjct: 422 GATYGAQETALIARLTSRIRDYEGHMEAMEVRKSAAALRAIWVEGNEYLQEVAPWSTFKQ 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGF 497
           +P+RA+    + + +IR  A+L   F+P  A  +   +   D+N   ++    + L PG 
Sbjct: 482 DPERAAMQTRLALNLIRLYAVLSSPFIPDAAAAMLAAMQTNDDNWPDEASAALEILAPGH 541

Query: 498 MLHKTFDPIFPRF 510
                 + +F + 
Sbjct: 542 AF-SVPEVLFSKI 553


>gi|156844126|ref|XP_001645127.1| hypothetical protein Kpol_538p29 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115784|gb|EDO17269.1| hypothetical protein Kpol_538p29 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 570

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/522 (32%), Positives = 275/522 (52%), Gaps = 47/522 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I YPNA+PH+GH Y  ++ DV  R+    G   LFTTGTDEHG KI  A+Q AG +
Sbjct: 22  VTTPIFYPNAKPHLGHLYSSLLCDVQHRWQLAKGNQSLFTTGTDEHGIKIQTASQKAGFS 81

Query: 69  -TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             + FV+     F  +    DI +  FIRTT++ H +  ++LWK   D G IYKG + GW
Sbjct: 82  DPREFVNTLYPEFIKLNKNCDIEFTRFIRTTDQDHIENVKVLWKTCWDNGYIYKGEHKGW 141

Query: 128 YSLRDEAYYNDDEVYKGAD---GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           YS+ DE +Y + +V K  +          +N V    E  YFF+LSA++++L+ Y E HP
Sbjct: 142 YSISDETFYPESKVIKDPNNPGKYINTETNNEVVHQSESNYFFKLSAFRERLIDYIEKHP 201

Query: 185 EFILPIERRNEVISFVK--SGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           ++I P  +++++++ +K  +G++DLS+SR     +WGI++P+DP   +YVW DAL NY++
Sbjct: 202 QYIYPKSKKDQILNELKSSTGMQDLSISRPVSRLEWGIEVPNDPDQKIYVWFDALCNYMS 261

Query: 241 TTGYLDNPDG-------------------SKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           + G +++                         + W    HVIGKDI++FH IYWP+FL++
Sbjct: 262 SLGNIESIRNNIPVTSQHNLGGVNNVELKEPLELWKNTTHVIGKDIIKFHTIYWPSFLMA 321

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A+LP+ K+V  H   L  G K+SKSLGNV+DPI+++E  G D+LR+FL+      +DG +
Sbjct: 322 ASLPINKQVIVHSHWLCNGVKMSKSLGNVLDPIQMVEYYGADSLRWFLLENSQLEEDGDF 381

Query: 342 DKDGLKKRVNADLANGIGNLVSRS--VSMILKDYDGMIPTPGAFT---------ESD--- 387
            +D L   +     +  GNL++R       +K       +              E D   
Sbjct: 382 QEDKL-FMIRDMFVSKWGNLINRCCGTKFNIKRAVDEFSSKADVESSILQLFEDEQDMKI 440

Query: 388 --ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
             E+I      +   + E +      + L  + S++S+ +      KPW  +    D   
Sbjct: 441 QIENIFKNLKELPNLMDEKINKFEFAQLLRNIWSILSDANTLMQDAKPWTREGIKQD--- 497

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +++   E  R L+IL    +P+L+    + + V  E + ++
Sbjct: 498 AIIFTCTETSRILSILCAPLIPRLSISFLNRIDVPKECQTYK 539


>gi|319779090|ref|YP_004130003.1| Methionyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109114|gb|ADU91860.1| Methionyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 693

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 129/553 (23%), Positives = 225/553 (40%), Gaps = 59/553 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             ++ +TA+ Y N   HIGH  E I AD+  R  R+ G  V F    D HG  I   AQ 
Sbjct: 3   RTIFATTALPYANGSFHIGHIMEFIQADIWVRAMRMFGHKVYFMGADDAHGAPIMLKAQA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  V + +       +   I +D +  T    + +  + ++K +   G I     
Sbjct: 63  EGITPEELVSRIASERPQYLNGFQIKHDFWHSTHSTENIEVSQNIYKALKKNGFISTKTI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
             ++      +  D  +             G   +   A + P   +E            
Sbjct: 123 EQFFDPIKGMFLPDRYIKGECPKCHAKDQYGDSCEVCGAVYAPTDLIEPYSTLTKASPEL 182

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----------SFVKSGLKDLSL 209
              E +FF LS  +     +  ++    L        +          S   S L D  +
Sbjct: 183 RTSEHFFFNLSDPRCIQFLHDWTNNSGNLNKTHLQGEVLAKTKEWLGDSESDSKLGDWDI 242

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNY------LTTTGYLDNPDGSKAKFWPADLHVI 263
           SR    +GI IPD+     YVW+DA   Y       T    LD       K   + +H I
Sbjct: 243 SRDAPYFGIPIPDEKDKYFYVWLDAPAGYLAALKAYTKKEGLDYDSIVDPKGETSQIHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGV 322
           GKDI+ FHA++WPA L  ++  +P ++  HGFI  KGEK+SKS G  I P++     +  
Sbjct: 303 GKDIIYFHALFWPAMLKFSDRKVPDRIQVHGFITVKGEKMSKSRGTGISPLKYLSVGLNP 362

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
             LRY++  +++   +D  +  +    RVN+DL     N+ SR+ + I + +D      G
Sbjct: 363 AYLRYYIAAKLSAKVEDVDFTAEDFMVRVNSDLVGKYVNIASRASTFINRFFD------G 416

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--- 438
             +   E       ++  E++ +++N    +A+  +++   +V+  FD  KPW L K   
Sbjct: 417 HLSFKTEEQFEEIKKLTDEVKADIENFEYSKAVRAIMAFADKVNTAFDQAKPWVLAKGFS 476

Query: 439 ----TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-- 492
                   +   +    +   + +  LL    P+L+  I++ LF   ++  +    ++  
Sbjct: 477 EASDETKAQLQDICSQAIAGFKAICTLLYPITPELSTSIYEDLFDIKKDLVWDDAYEKPL 536

Query: 493 -LKPGFMLHKTFD 504
            +KP   L +  +
Sbjct: 537 LIKPFKHLLQRVE 549


>gi|329851532|ref|ZP_08266289.1| methionyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840378|gb|EGF89950.1| methionyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 571

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/554 (21%), Positives = 221/554 (39%), Gaps = 57/554 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G +VL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFMRARGHEVLYICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+     +   +   +SYD F R++  ++    ++  + +   G I +   
Sbjct: 63  AGQDVRTYCDEQHLIQKSAGESFGLSYDWFGRSSSPQNRQLTQMFCEALDRNGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP---------------------VQ 158
              +S+ D  +  D        + G +    +   N                      ++
Sbjct: 123 KMVFSIDDGRFLPDRYVEGTCPHCGYEKARGDQCDNCGRLLDPTDLKNPYSAVSGSTNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +  +D+L ++  SH  +  P   ++     +  GL D  ++R    WG+
Sbjct: 183 VRDTRHLYLLQTKVEDRLRAWIASHDNW--PHLAKSIANKHLDEGLIDRGITRD-LAWGV 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD--------L 260
            +  D          + YVW DA   Y+  T    +  G       +W  D        +
Sbjct: 240 PVTKDGQPRPGFENKVFYVWFDAPIEYIAATREFFDAKGKPDGWQTWWRLDQGAEDVSYV 299

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA +L +  P      + +  ++   G K S S+   +   + +E
Sbjct: 300 EFMGKDNVAFHTVSFPATILGSGEPWKMVDTLKAFNWLNWYGGKFSTSMNRGVFMDQALE 359

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R++L+       D  +  +  +  +N DL + +GN V+R          G +P
Sbjct: 360 LLPADYWRWYLIANSPESSDSSFTWEQFQATINKDLNDVLGNFVNRITKFTEGKLGGGVP 419

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G     +E +    +  L E  E ++   + +A   V  +    + Y     PW   K
Sbjct: 420 EGGEAGPIEEKLYGDVAEQLAEATEALETMEMRKAAQAVRRIWVLGNEYLQEAAPWTAIK 479

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-----QRL 493
           T+P RA  ++   + ++R  A+L Q F+P  A KI   +  A     + S D      +L
Sbjct: 480 TDPARAGVIVRHALNLVRLNAVLAQPFMPFSAEKIAATVG-ASLPLAWPSTDIRAELDKL 538

Query: 494 KPGFMLHKTFDPIF 507
             G  +    + +F
Sbjct: 539 VTGQTVAA-GEILF 551


>gi|294659967|ref|XP_462418.2| DEHA2G20130p [Debaryomyces hansenii CBS767]
 gi|199434368|emb|CAG90928.2| DEHA2G20130p [Debaryomyces hansenii]
          Length = 589

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 172/535 (32%), Positives = 277/535 (51%), Gaps = 56/535 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDV-LFTTGTDEHGQKIAKAAQ 63
           +  YI++ I Y NA+PH+GH Y M++ D   R+ +LD      F TGTDEHG KI  AA+
Sbjct: 23  KPFYITSPIFYVNARPHLGHLYSMLLCDTRNRWEKLDPNKSSFFLTGTDEHGLKIQTAAE 82

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T K   DQ S NF+++   ++I+YD FIRTT++ H  T +  W  + +KG +Y+G 
Sbjct: 83  KLGMTPKDLTDQVSTNFKNLGQKVNIAYDRFIRTTDEDHVKTVQYFWSVMEEKGFLYQGS 142

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG------QYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +SGWY++ DE +Y   ++ +  D              N V + EE  YFFRLS +QD+L+
Sbjct: 143 HSGWYAVSDETFYPATQIEEMVDPTTGEKKMISKETKNEVVYQEETNYFFRLSHFQDRLI 202

Query: 178 SYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDA 234
           ++ ES+P+FI P  +  E++    ++ L DLS+SR      WGI++P D    +YVW DA
Sbjct: 203 AFLESNPDFIKPKSKYTELLRELTENKLTDLSVSRPSSRLTWGIEVPGDSSQKIYVWFDA 262

Query: 235 LTNYLTTTGY-------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           L NY+T  G+        +      +  WPA  H+IGKDI+RFH IYWP FL++A + +P
Sbjct: 263 LLNYITACGFPEKFPIVNEKYQTEPSNMWPA-THIIGKDIIRFHCIYWPIFLMAAGIDMP 321

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           ++V  H   L  G K+SKSLGNV+DP+E ++  G DALR+FL        D  Y++    
Sbjct: 322 RQVVVHSHWLCDGFKMSKSLGNVVDPLETLDYYGEDALRFFLTEYSNIESDCNYNEQYFY 381

Query: 348 KRVNADLANGIGNLVSRSV-----------SMILKDYDGM------IPTPGAFTESDESI 390
                +L     NL++R             S    ++D +             T   + I
Sbjct: 382 -LTRENLIGKYANLITRCGGNAFNILESVKSFQAGEFDNIDVLIRDHCLNNEKTNESKQI 440

Query: 391 LS-------VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK----- 438
           ++       + + +   +  +M +    R + +  + + + ++ F   +PW   K     
Sbjct: 441 IALKNELSEILNNLYTSMDMSMSSFDQMRTIQKWWAPLEKANQLFQLGQPWLYTKSLKSD 500

Query: 439 --TNPDR------ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
             ++ D+       +  +++  E  R  +IL+   +P L++KI D L V+ +NR 
Sbjct: 501 TVSDDDKEIHKLIQNYYVFMAAETSRICSILINPIIPNLSSKILDRLAVSPQNRT 555


>gi|194366698|ref|YP_002029308.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|226710935|sp|B4SRG1|SYM_STRM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194349502|gb|ACF52625.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 693

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 127/541 (23%), Positives = 207/541 (38%), Gaps = 44/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               ++TA+ Y N   H+GH    I AD+  R  R+ G    F    D HG  I  AA+ 
Sbjct: 3   RTALVTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAWFVCADDTHGTPIMLAAEK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AGVT + F+     +         +++D +  T    +       + K+   G I +   
Sbjct: 63  AGVTPETFIANIQASHERDFAAFGVAFDHYDSTNSAANKALTEQFYLKLEAAGHISRRSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPV--------------QW 159
           + +Y      +  D  V             G + +   A + P               + 
Sbjct: 123 AQFYDPAKGMFLPDRYVKGICPNCGSADQYGDNCEVCGATYAPTDLKEPRSVVSGATPEM 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF +  +   L  +            +  E ++  + GL+   +SR    +G +
Sbjct: 183 RDSEHFFFEVGHFDGFLRDWLAGDVALPGVKAKLGEWLN-AEGGLRAWDISRDAPYFGFE 241

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW------PADLHVIGKDILRFHAI 273
           IP  P    YVW+DA   YL++   L +  G   +            H +GKDI+ FH +
Sbjct: 242 IPGQPGKYFYVWLDAPIGYLSSFQTLCSRIGEDFEAHLRAGTSTELHHFLGKDIVNFHGL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR- 331
           +WPA L       P ++  +G++   G K+SKS G  +     +   +  +ALRY+    
Sbjct: 302 FWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDAGLEPEALRYYFAAK 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D   +      RVNADL     NL SR    I K +DG++    A    D +  
Sbjct: 362 SGGGVDDLDLNLGDFIARVNADLVGKFVNLASRCAGFISKRFDGLL----AAQLPDAAQY 417

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
                 L  IRE  +      A+   ++L  E +RY D  KPW + K      +   V  
Sbjct: 418 QRFVDGLAPIREAYERNDPAAAIRLTMTLADEANRYIDDVKPWVIAKQEGADAQLQAVCS 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             + + R L   L+  +P  A +     F+A     +  L Q L  G  +   + P+F R
Sbjct: 478 QGLNLFRVLVTALKPVLPATAAQ--AEAFLAAPVNDWTELAQPLL-GHRIT-DYTPLFTR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|262195070|ref|YP_003266279.1| methionyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262078417|gb|ACY14386.1| methionyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 557

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 125/515 (24%), Positives = 218/515 (42%), Gaps = 36/515 (6%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I+  + Y N   H+G+    M+ ADV ARF R +G +VL+   TDEHG     AA  
Sbjct: 2   KTLITAGLPYINGIKHLGNLVGSMLPADVYARFLRQEGDEVLYVCATDEHGVPAELAAHE 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + F +   +   D+     I++D F R++   +H+  R ++ +++D G I K   
Sbjct: 62  AGQPVEAFCEAQHQIQADIYRRFGIAFDYFGRSSAPSNHELTREIFSQLADNGFIEKRAT 121

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              YSL D+ Y  D  V            +G   +      +P   +E        +  +
Sbjct: 122 QQVYSLDDQRYLPDRYVIGTCPRCGYEAARGDQCESCTTLLDPTDLIEPRSAVSGSTKLE 181

Query: 174 DKLLSYY-------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            +   +                  +   P   R     ++  GL+D  ++R    WG+ +
Sbjct: 182 VRSTEHLYLLLSKLEPTVKDWVEEQGQWPPLTRQVAGKWLGEGLRDRCITR-NLAWGVDV 240

Query: 221 PDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHA 272
           P + + + YVW DA   Y+  T      +      K +  D      +  +GKD L FH 
Sbjct: 241 PGEEELVFYVWFDAPIGYIAATRDWAESSGQPDAWKAYWQDATDVHYVQFMGKDNLPFHT 300

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I +PA L+ A+    LP ++    ++ + G K S S    +     +E    D  RY L+
Sbjct: 301 IMFPAMLMGASSSWNLPDQIKGLHWLNYYGGKFSTSQKRGVFSDAALELFPADYWRYALM 360

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +I    D  +  +     VN DLA+ +GN V+R +      +   +P  G+   ++ ++
Sbjct: 361 AQIPETSDSTFTWEMFASAVNKDLASVLGNFVNRVLRFTRSKFGETLPEGGSPGPAEAAL 420

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
              C   ++  R +M+     RA+  +  L +  + Y D + PW   KT+ DRA+ V+  
Sbjct: 421 QEECEAQVKLFRASMRALEFRRAMQALRKLWTIGNTYIDTEAPWAAIKTDRDRAAVVIRT 480

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
              ++R   +  Q  +P L+  + D L ++D  R 
Sbjct: 481 CFNLLRLYGVSAQPIMPTLSASVLDALQLSDAERS 515


>gi|87306777|ref|ZP_01088924.1| methionyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290956|gb|EAQ82843.1| methionyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 673

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 126/527 (23%), Positives = 206/527 (39%), Gaps = 41/527 (7%)

Query: 14  AYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV 73
            Y N   HIGH  E I  D+  RF RL G D  +    D HG  I  +A+   V+ + F+
Sbjct: 2   PYANGPIHIGHLVEYIQTDIWVRFQRLRGADCRYFCADDTHGTAITISAKRNEVSEEEFI 61

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
            + S   +       I +D++  T  + + + C   WK + D   + +      Y    +
Sbjct: 62  AKMSAEHQTDFAGFAIEFDNYGSTNSEENRELCAQFWKSLRDADLVIEKEIEQLYDPEAQ 121

Query: 134 AYYNDDEVYKGA----------DGQYYNAQHNPVQWMEEEG-------------YFFRLS 170
            +  D  V              D       + P   ++                + F   
Sbjct: 122 QFLADRFVRGTCPKCGRTNQPGDNCECGHTYTPADLIDPVSVLSGATPELRKATHLFVAL 181

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                 L  +    E +           F+   L+D  +SR    +G +IPD P    YV
Sbjct: 182 EKLHPFLEKWSQSGEHLQTEVANYLKGHFLHEELRDWDISRPGPYFGFEIPDSPGNYWYV 241

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLP 285
           W DA   Y+ +T      +G     W  D      H IGKDI  FH ++WP  L +A   
Sbjct: 242 WFDAPIGYIASTWEWCKRNGESLDKWWKDPETEVHHFIGKDITYFHTLFWPGMLQTAGFT 301

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKD 344
           LP KV  HGF+   GEK+SKS G  +   + +E +    LRY+   ++     D   +  
Sbjct: 302 LPTKVHIHGFLTVGGEKMSKSKGTFVKAAKYLEHLDPAYLRYYYATKLGPRLDDLDLNVA 361

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
              +++++DL   + N+ SR    +            A    D+      ++  +EI   
Sbjct: 362 EFAEKIDSDLVGKVVNIASRCAKFV------QTTGLSAAYPDDDGRFEYAAQAGEEIAAA 415

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILL 462
            +    +RA+  ++ L    + + +A KPWEL+K   N      V  V + + RQ+ I L
Sbjct: 416 YEACDYNRAMRLILELADRANPFIEANKPWELRKDPANAQALQDVCTVGINLFRQIIIYL 475

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
              +PKLA ++  +L   D    +      L  G  ++K F+ +  R
Sbjct: 476 SPVLPKLATEVGALLN--DPITSWDQSQTPL-AGTQINK-FEHLMKR 518


>gi|320534024|ref|ZP_08034576.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133763|gb|EFW26159.1| methionyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 615

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 140/549 (25%), Positives = 227/549 (41%), Gaps = 58/549 (10%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV +R+ R+ G DVL  +GTDEHG  I  AA   G++ 
Sbjct: 8   VAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAADEEGLSA 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+   + ++  + D G + +        
Sbjct: 68  RELADRNNRLIVEDLVALGLSYDLFTRTTAGNHYHVVQDMFTTVRDNGYMVQQVTRSAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------------QWMEEEG 164
                      +         E  +G        Q +P               +++E   
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDTCGNQLDPTDLISPRSRINGETPEFVETTH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           +F  L A    L ++ +             +    +   ++  +++R   DWGI +P   
Sbjct: 188 WFLDLPALAQALGAWLDEREASGTWRPNVIKFSQNLLDDIRPRAMTRD-IDWGIPVPGWE 246

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           D P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH+  
Sbjct: 247 DQPTKRLYVWFDAVIGYLSASVEWARRSGDPEAWRAWWNDPQALSYYFMGKDNIVFHSQI 306

Query: 275 WPAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           WPA LL  N              L LP +V S  F+  +G+K S S G VI   + ++  
Sbjct: 307 WPAELLGYNGQGESGGEPGRLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVRDFLQRY 366

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             DALRYF+        D  +      +R N +L  G GNLV+R+ SMI K +  + P P
Sbjct: 367 QADALRYFICAAGPETADADFTWAEFVRRTNGELVAGWGNLVNRTASMIHKRFGQI-PEP 425

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                 D  +L         + + +       AL + + LV E ++Y    +P++LK  +
Sbjct: 426 AELQAIDRVLLDAVEAGFASVGDLIAQHRQKAALGEAMRLVGEANKYVADTQPFKLKGED 485

Query: 441 P---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKP 495
           P    R +TVL+   + +  L ++L  F+P  AN +  +L           +++   L P
Sbjct: 486 PATQARLATVLHTLAQAVADLNLMLSPFLPHAANDVDRVLGGRGRIAPMPRIEEVDELDP 545

Query: 496 GFMLHKTFD 504
              L + FD
Sbjct: 546 EH-LPEAFD 553


>gi|256370611|ref|YP_003108436.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009403|gb|ACU52763.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 553

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 120/529 (22%), Positives = 239/529 (45%), Gaps = 38/529 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  ++ A+ Y N   HIGH     + AD+  R+ + +G +V+F +GTDEHG  I   A+
Sbjct: 4   KRYTVTAALPYANGPIHIGHLSGVYLPADIFVRYLKSNGKNVIFISGTDEHGVPITIKAK 63

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G++ +  V++     ++    + I +D+F RTT K H  T    +K +S K  +++  
Sbjct: 64  EEGLSPQELVNKYHSLIKNSLKKMGILFDNFSRTTSKIHFKTSIKFFKILSKKKILFEKE 123

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEEEGYF 166
              ++  + + +  D  +             G                NP  +   +   
Sbjct: 124 SEHYFDKKVKKFLPDRYIRGICPKCSYKAAYGDQCEKCGGSISPEELINPYSFFTGKKPI 183

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVIS-----FVKSGLKDLSLSRKTFDWGIK-- 219
            + + +    L+ Y++  E  +  ++  + +S     ++K GLK  +++R   +WGI   
Sbjct: 184 LKKTKHWYLPLNKYQNFLEKWIKTKKFKKNVSGQIKAWLKEGLKPRAITRD-LNWGIPLP 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
           I ++   ++YVW +A   Y+++T       G   + +  +     ++ IGKD + FH I 
Sbjct: 243 IKNNTGKVLYVWFEAPIGYISSTIEWGLKTGKNWEKYWKNKNTAIINFIGKDNIVFHGII 302

Query: 275 WPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVR 331
           +P    +     LP  V ++ F+  + +KIS S    +   E +E+       LRY L  
Sbjct: 303 FPIMLKVHGEYILPYNVPANEFLNIEKKKISTSKKWAVWLHEYLEDFPKKEDVLRYVLTS 362

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
            +   KD  +     KK+ N++L + +GN  +R V +  K ++G +P+P  F   D  IL
Sbjct: 363 NMPETKDTNFSWQNFKKKNNSELVSILGNYFNRVVVLTKKLFNGKVPSPEKFKTKDFFIL 422

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               +   +I   ++      AL   + L    ++Y   ++PW++ K    R  T++Y++
Sbjct: 423 KFLKKCPLKIGGFIEKYHFKDALMTFMELARLGNKYLTDEEPWKINK---KRVKTIIYIS 479

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKPGFML 499
            +++  +  L   F+P  ++KI  +L +   N       ++ + PG +L
Sbjct: 480 FQIMGVIGNLSNPFLPFTSSKILKMLSLKQLNWQLLLKTNEIVTPGLLL 528


>gi|58266864|ref|XP_570588.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110666|ref|XP_776160.1| hypothetical protein CNBD2070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258828|gb|EAL21513.1| hypothetical protein CNBD2070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226821|gb|AAW43281.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 724

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/569 (20%), Positives = 213/569 (37%), Gaps = 66/569 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+     + ADV AR++R   +  L+  GTDE+G      
Sbjct: 29  GQRNVLITSALPYVNNVPHLGNIIGSTLSADVFARYNRTLNVPTLYICGTDEYGTATETK 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT      +  +   ++ +   IS+D + RT+   H +  + +++++ D G    
Sbjct: 89  ALEEGVTPYELCTKFHKLHTEIYEWFQISFDKWGRTSSPEHTEITQGIYRRLHDNGLFRL 148

Query: 122 GCYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHN-------PVQWMEEEG----- 164
                 Y + D+ +  D          G D    +           P Q +         
Sbjct: 149 ETTDQTYCVDDKLFLADRFVEGICPNCGYDDARGDQCDKCSLTFSSPTQLLNPRCKRNKA 208

Query: 165 --YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------------SFVKSGLKDL 207
                R S +    L   +      +   R                      +  GL+  
Sbjct: 209 HTLSVRPSTHACYRLDLLQPRLVEWMQKARVKGKWGTNAVITEKGEIVEPRMLGEGLRPS 268

Query: 208 SLSRKTFDWGIKIPD---------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           +++R    WG+++P              ++YVW DA   Y + T      +  K    P 
Sbjct: 269 AVTRD-LKWGVEVPKVGDEEEDKAMEGKVIYVWFDAPIGYPSITA-TYTEEWEKWWKNPD 326

Query: 259 DL---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDP 313
           ++     +GKD + FH + +PA LL           + S  ++ ++  K SKS    +  
Sbjct: 327 NVELYQFMGKDNVYFHTVLFPAMLLGTEERWTMLHNISSTQYLNYEDTKFSKSRNVGVFG 386

Query: 314 IEVIEEVGVDA-LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
               E        RY+L+ +     D  +         N +L   +GN V+R V  I   
Sbjct: 387 NNARETGQPPEIWRYYLISQRPENSDSSFLWSKFIAANNNELLANLGNFVNRVVKFINAK 446

Query: 373 YDGMIPTPGAF---------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            D  +P P  F            D   ++  +  L+E RE M +  +   LA  ++L + 
Sbjct: 447 LDSKVPGPEDFAGGEVAPPADSLDVDFVTDVNTRLKEYREQMDDTKLRGGLATAMALSAR 506

Query: 424 VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++Y         L  +NP R + VL   V +I  L+++   F+P  +  I   L     
Sbjct: 507 GNQYLQENSLDNALLASNPKRCAEVLLNAVNLIYVLSVVFHPFMPNTSEGILRQLNAPAR 566

Query: 483 NRCFQ-SLDQRLKPGFMLHKTFDPIFPRF 510
           +   + S+D  + PG +L K  + +F + 
Sbjct: 567 SLPTKFSID--ILPGHVLGKA-EYLFKKI 592


>gi|119496181|ref|XP_001264864.1| methionyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413026|gb|EAW22967.1| methionyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 651

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 117/553 (21%), Positives = 226/553 (40%), Gaps = 50/553 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTQQHTEISQAIFKRLYDNGYLT 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWME----------- 161
           +      +     ++              Y+ A G   +   + +   +           
Sbjct: 131 EKTAEQPFCEAHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190

Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                  +     L   Q ++  +   +  +   P   R+   +++K GLKD  ++R   
Sbjct: 191 TPVRRSTKHIHLLLDKLQPEIEKWVLPAMEKGNWPKNSRDITKAWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P       ++YVW +A   Y + T      D  K    P ++     +GKD + 
Sbjct: 250 KWGVPVPLPGFENKVLYVWFEACIGYPSITA-NYTADWEKWWRNPEEVELYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L           + +  ++ ++G K SKS G  +      +  V  D  R
Sbjct: 309 FHSVIFPGCELGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGNNARQTGVPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L++      D  ++     +  N++L   +GNLV+R V +I   Y+  IP      ES
Sbjct: 369 YYLLKNRPETGDTQFEWRPFVECNNSELLAKLGNLVNRVVKLIAASYNSTIP-EFIVPES 427

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            +  L   + +L++  E M+   +   +   + L    +    A +    L    PDRA+
Sbjct: 428 FQPNLDEITSLLRQYIEEMEGVHLRAGVNTAMRLAEAGNGLIQANRLDNALIANEPDRAA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--------RLKPGF 497
            V+   + +I  L+ +   ++P  +  I + L          SLD+         LK G 
Sbjct: 488 AVVGTVINLIHLLSSVFAPYLPATSRSILEQLNAP--FGVIPSLDELKDGWKPVALKGGH 545

Query: 498 MLHKTFDPIFPRF 510
            + K    +F R 
Sbjct: 546 KIGKA-KYLFSRI 557


>gi|6321610|ref|NP_011687.1| Msm1p [Saccharomyces cerevisiae S288c]
 gi|1711640|sp|P22438|SYMM_YEAST RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1323302|emb|CAA97197.1| MSM1 [Saccharomyces cerevisiae]
 gi|285812366|tpg|DAA08266.1| TPA: Msm1p [Saccharomyces cerevisiae S288c]
          Length = 575

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 170/523 (32%), Positives = 264/523 (50%), Gaps = 49/523 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G  
Sbjct: 17  VTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGFD 76

Query: 69  -TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + GW
Sbjct: 77  QPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYIYMGEHKGW 136

Query: 128 YSLRDEAYYNDDEVYKG--ADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           YS+ DE +Y + +V K    DG+Y N +  N V +  E  YFFRLS +  K++ +   +P
Sbjct: 137 YSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKNP 196

Query: 185 EFILPIERRNEVISFVKSG--LKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY-- 238
           +FI P  +R++++  +++G  L DLS+SR      WGI  P+DP   +YVW DAL NY  
Sbjct: 197 DFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYLS 256

Query: 239 ----------------LTTTGYLDNPDGSKAKFWP-----ADLHVIGKDILRFHAIYWPA 277
                                   N  G     +P       +HVIGKDI +FH +YWP+
Sbjct: 257 SIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWPS 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           FLL+A LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      +
Sbjct: 317 FLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLEE 376

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS--------------MILKDYDGMIPTPGAF 383
           DG + +  L +     L +  GNL++R                      +  +       
Sbjct: 377 DGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPIV 435

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +E  E++  + ++  +   E +      + L  V S++++ +      KPWE      D+
Sbjct: 436 SERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWER---ELDQ 492

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              ++++ +E  R L+IL Q+ +P L+    D + V+ E R  
Sbjct: 493 QDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKRTI 535


>gi|284033605|ref|YP_003383536.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812898|gb|ADB34737.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 585

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 150/574 (26%), Positives = 233/574 (40%), Gaps = 75/574 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  + A  Y N   HIGH     + ADV +R+ R+ G DVL  +GTDEHG  I   A+  
Sbjct: 4   ILAAVAWPYANGPRHIGHVSGFGVPADVFSRYQRMAGNDVLMVSGTDEHGTPILVQAERE 63

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           GV+ +   D+ +R   +    L +SYD F RTT   H+   + L++ +   G +      
Sbjct: 64  GVSPRELADRYNRMIVEDLHGLGLSYDLFTRTTTGNHYAVAQELFRTVHRNGYLVPRTAM 123

Query: 126 GWYSLRDE-----AYYNDDEVYKGAD---GQYYNAQHN---------PVQWMEEEGYFFR 168
           G  S          Y        G D   G   +   N         P   +  E   F 
Sbjct: 124 GAISPSTGRTLPDRYIEGTCPICGYDAARGDQCDNCGNQLDAIDLREPRSRINGETPVFV 183

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKI--- 220
            + +    L          L   R +   + +K  L  L   R        DWGI +   
Sbjct: 184 ETEHFFLDLPALADALGSWLQT-RTDWRPNVLKFALNLLDDVRPRAITRDIDWGIPVPLP 242

Query: 221 --PDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271
              ++P   +YVW DA+  YL+ +        D    + W  D      + +GKD + FH
Sbjct: 243 GWQENPAKRLYVWFDAVIGYLSASIEWARRTGDPDAWRAWWCDPTALSYYFMGKDNITFH 302

Query: 272 AIYWPAFLLSANLP---------LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           A  WPA LL  N P         LP +V S  F+  +G K S S   VI    V+E  G 
Sbjct: 303 AQIWPAELLGYNTPNPGRYGALNLPTEVVSSEFLTMEGRKFSSSRSVVISVRHVLERYGP 362

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DALRYF+       +D  +      +R N +L    GNLV+R+ SMI K++   IP  G 
Sbjct: 363 DALRYFVAAAGPESQDTDFTWAEFVRRTNDELVGTWGNLVNRTASMIAKNFG-AIPAAGE 421

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            T +D  +L+        + E++++  + +A+   + + +E ++Y   Q PW+   ++P 
Sbjct: 422 LTTADHELLARSRAAFGTVGEHLEHHRLRQAVGAALRVATEANQYLSQQAPWKQ--SDPV 479

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA------DENRCFQSLDQR---- 492
           R  T+L+V  +V+    +LL  F+P  A ++ + L          E R    LD      
Sbjct: 480 RQGTILHVAAQVVADSNVLLTPFLPHSAQQVHETLGGTGAVTDRPEIRDVADLDGGPGYP 539

Query: 493 ----------------LKPGFMLHKTFDPIFPRF 510
                           + PG  +     P+F + 
Sbjct: 540 VITGNYGRAAAWRSRPVVPGTPV-APPRPVFAKL 572


>gi|126735051|ref|ZP_01750797.1| methionyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715606|gb|EBA12471.1| methionyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 572

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 117/528 (22%), Positives = 224/528 (42%), Gaps = 47/528 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRQRGHEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A      +  +       +AD   +S+D F R++  ++H   +    +++D G I +   
Sbjct: 63  ASKPVAEYCAEMHGIQAKIADGFRLSFDHFGRSSSPQNHKLTQAFAMRLADVGLIKEVTE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNP---------------VQ 158
              YS+ D  +  D  +            +G        Q +P               ++
Sbjct: 123 EQVYSVADGRFLPDRYIEGTCPNCGFESARGDQCDNCTKQLDPADLIDAHSTISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R S  +D L ++ +S  ++ +      +       GL+D  ++R   DWGI
Sbjct: 183 VRETKHLYLRQSELKDDLAAWIDSKTDWPILTTSIAKKWLTDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    Q        + YVW DA   Y+      ++       A++W  D          
Sbjct: 242 PVKQGDQTWPGMEGKVFYVWFDAPIEYIACAQEWEDAGKGTDWARWWRTDKGADDVTYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPATILGSQEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEL 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   +P 
Sbjct: 362 LPADYWRWWLLSHAPESSDAEFTWENFQTDVNKDLADVLGNFVSRITKFCRSKFSEAVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            GA+  ++E +++  +  ++    +M    + ++ A++ ++    + Y  A  PW   KT
Sbjct: 422 GGAYGPAEEQLIADLTTRIRAYEGHMDAMEVRKSAAELRAIWVLGNEYLQANAPWTTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +P+ A+  + + + +IR  A+L  AF+P  +  + D +   D++    
Sbjct: 482 DPETAAMQVRLALNLIRIYAVLSAAFIPDASKTMIDAMQTDDDSWPID 529


>gi|323451800|gb|EGB07676.1| hypothetical protein AURANDRAFT_71793 [Aureococcus anophagefferens]
          Length = 1349

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 170/409 (41%), Positives = 244/409 (59%), Gaps = 10/409 (2%)

Query: 106  CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM-EEEG 164
               LWK +   G IY G Y GWY +RDE YY + E+  G            V+W  +E  
Sbjct: 936  VEKLWKALEANGMIYLGSYEGWYCVRDECYYTESELVDGK-----APTGADVEWKAKEPS 990

Query: 165  YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDD 223
            YFF+LSA+++KL+  YE   + + P  RRNEV+SF+K   L+DLS+SR TF WG+ +P D
Sbjct: 991  YFFKLSAFREKLIDLYEGDEDALGPKSRRNEVLSFLKGEELRDLSISRTTFKWGLSVPGD 1050

Query: 224  PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
              +++YVW+DAL NYLT  GY D+ D      W    HV+GKDILRFHA+YWPA LL+A+
Sbjct: 1051 DDHVIYVWVDALANYLTALGYGDDDD-EWRDMWAGATHVVGKDILRFHAVYWPALLLAAD 1109

Query: 284  LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            LP PKK+F+HG+    G KISKSLGNV+ P E++ + GVDA RYFL+ E+  G DG + +
Sbjct: 1110 LPPPKKIFAHGWWTKDGAKISKSLGNVVVPAELLADYGVDATRYFLLSEVPFGGDGDFSR 1169

Query: 344  DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIR 402
              +    N  LAN +GNL  R  +MI K+  G  P  P   T+ D ++L+    +   +R
Sbjct: 1170 TAMLAAANGFLANAVGNLCQRCCAMIAKNCGGAAPALPDEPTDDDAALLAAARGLGDAMR 1229

Query: 403  ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +     +  AL++V ++V   +RYFD  +PW+L+K++P+R   VL V++E +R +AI  
Sbjct: 1230 PHADALRLDGALSEVEAVVRAANRYFDRAEPWKLRKSDPERMGDVLAVSLETLRCIAIAY 1289

Query: 463  QAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            Q F+P  A ++  +L VA+  +R   +L     P         P+FPR 
Sbjct: 1290 QPFMPDAAGRMLALLGVAEGPDRALAALPAGGVPAGAALPKPKPVFPRI 1338


>gi|3998|emb|CAA32778.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 575

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 170/523 (32%), Positives = 264/523 (50%), Gaps = 49/523 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G  
Sbjct: 17  VTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGFD 76

Query: 69  -TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + GW
Sbjct: 77  QPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYIYMGEHKGW 136

Query: 128 YSLRDEAYYNDDEVYKG--ADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           YS+ DE +Y + +V K    DG+Y N +  N V +  E  YFFRLS +  K++ +   +P
Sbjct: 137 YSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKNP 196

Query: 185 EFILPIERRNEVISFVKSG--LKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY-- 238
           +FI P  +R++++  +++G  L DLS+SR      WGI  P+DP   +YVW DAL NY  
Sbjct: 197 DFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYLS 256

Query: 239 ----------------LTTTGYLDNPDGSKAKFWP-----ADLHVIGKDILRFHAIYWPA 277
                                   N  G     +P       +HVIGKDI +FH +YWP+
Sbjct: 257 SIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWPS 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           FLL+A LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      +
Sbjct: 317 FLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLEE 376

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS--------------MILKDYDGMIPTPGAF 383
           DG + +  L +     L +  GNL++R                      +  +       
Sbjct: 377 DGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPIV 435

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +E  E++  + ++  +   E +      + L  V S++++ +      KPWE      D+
Sbjct: 436 SERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWER---ELDQ 492

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              ++++ +E  R L+IL Q+ +P L+    D + V+ E R  
Sbjct: 493 QDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKRTI 535


>gi|170099107|ref|XP_001880772.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164644297|gb|EDR08547.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 718

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/565 (20%), Positives = 222/565 (39%), Gaps = 60/565 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHR--LDGLDVLFTTGTDEHGQKI 58
           +  + + I++A+ Y N  PH+G+     + ADV +R++R        L+  GTDE+G   
Sbjct: 45  QGEKNILITSALPYCNNVPHLGNIIGSTLSADVFSRYNRAWTRNRRTLYICGTDEYGTAT 104

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A   G+T +   D+     ++  +  DI +D F RT+   H +  + ++  +   G 
Sbjct: 105 ETQALKEGITPRELCDKYHVLHKETYEWFDIGFDHFGRTSTPLHTEIAQEIYTNLGKNGV 164

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE---- 163
           + K      Y      +  D  V            +G      +   + ++ ++      
Sbjct: 165 LEKQEKEQTYCEGCPKFLADRFVEGICPHCGFEDARGDQCDGCSRTLDAIELIKPRCLVD 224

Query: 164 -----------GYFFRLSAYQDKLLSYYESHPE--FILPIERRN----EVISFVKSGLKD 206
                        + +L A Q +   + +   +     P    N     + + +K+GL  
Sbjct: 225 KTHVVTTKTSAHMYLKLDAIQPRTEEWIKKSWKAGKWSPNAVINGDGEIIDARLKNGLMP 284

Query: 207 LSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
             L+R    WG+ +P + +        ++YVW DA   Y + T     P+  +  F P D
Sbjct: 285 TPLTRD-LKWGVPVPIEGEDTFGMAGKVLYVWFDAPIGYPSITA-NYTPEWKQWWFNPRD 342

Query: 260 L---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVID-P 313
           +     +GKD + FH +YWP+  L       K   + +  ++ ++G K SKS    +  P
Sbjct: 343 VDLYQFMGKDNVYFHTVYWPSVQLGDGRDWTKLHHLSTTEYLNYEGGKFSKSKNRGVFGP 402

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                 +     RY+L+       D  +       R    +    GN V+R++  +   Y
Sbjct: 403 AAKETGIPSSVWRYYLLSTRPETADAMFSWPECVSREGRSILRSFGNFVNRALKFVSSQY 462

Query: 374 DGMIPTPGA-------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           DG+IP  G            D   +S+ + +L++  + M+   +   L  ++ + +  + 
Sbjct: 463 DGVIPESGDPPGPLSPNDPLDGEFISIVNNLLRDYIDAMEAVKLRLGLQIIMLISNRGNT 522

Query: 427 YFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           Y  +    + L   NP R + V+   V +I  L+ L+  F+P  ++ I   L V      
Sbjct: 523 YLQSSGLNKALMAENPTRCAQVISRAVNLIYVLSSLIYPFMPATSDSIIAQLNVPA-RVV 581

Query: 486 FQSLDQRLKPGFMLHKTFDPIFPRF 510
            + L   +  G  + K  + +F + 
Sbjct: 582 PEVLSTDILAGHTIGKP-EHLFKKI 605


>gi|126738818|ref|ZP_01754514.1| methionyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719999|gb|EBA16706.1| methionyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 581

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 119/564 (21%), Positives = 227/564 (40%), Gaps = 61/564 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ ARF R  G +VLF   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARFQRGIGNEVLFLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A      F  +      ++A    +S+D F R++   +H   +    K+ + G I +   
Sbjct: 63  AEKPVAEFCAEMHGVQSEIAKGFALSFDHFGRSSSPENHKLTQHFAGKLEEAGLIREVED 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
              YS+ D  +  D  V            +G   +    Q +P   +             
Sbjct: 123 RQVYSIADGRFLPDRYVEGTCPNCGFENARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F   S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 VRATKHLFLCQSQMKDQLDAWIDSKADWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            +             + YVW DA   Y+   G     +G       ++W  D        
Sbjct: 242 PVKKGGEDWPGMEGKVFYVWFDAPIEYIACAGEWAEANGKSDADWQRWWRTDKGAEDVKY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSAN-----------LPLPKKVFSHGFILHKGEKISKSLG 308
           +  +GKD + FH + +PA +L  N                 + S  ++ + G + S S G
Sbjct: 302 VQFMGKDNVPFHTLSFPATILGTNNYNEKSGDPERWKAVDYIKSFNYLNYDGGQFSTSKG 361

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             I   + +E +  D  R++L+       D  +  +  ++ VN DLA+ +GN VSR    
Sbjct: 362 RGIFMDQALEILPADYWRWWLLSHAPENSDAEFTWEDFQQSVNKDLADVLGNFVSRITKF 421

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               +   +P  G F   +++++   +  +Q    +M+   + ++  ++ ++    + Y 
Sbjct: 422 CRSKFGEEVPAAGEFGPEEDALIEELTNRIQAYEGHMEAMEVRKSAQELRAIWVAGNEYL 481

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCF 486
            +  PW   KT+PD+A+  + + + +I   A+L   F+P  A K+ D + V      +  
Sbjct: 482 QSTAPWSTFKTDPDKAAAQVRLGLNLIPLYAVLSAPFIPGSAAKMLDAMGVESPGWPKDV 541

Query: 487 QSLDQRLKPGFMLHKTFDPIFPRF 510
           ++    +  G       + +F + 
Sbjct: 542 KAALSVMPAGHGFT-VPEVLFAKI 564


>gi|171686138|ref|XP_001908010.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943030|emb|CAP68683.1| unnamed protein product [Podospora anserina S mat+]
          Length = 684

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 118/571 (20%), Positives = 219/571 (38%), Gaps = 71/571 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +E + I++A+ Y N  PH+G+    ++ ADV ARF R  GL  ++  G+DE+G    
Sbjct: 11  VPGKENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTIYICGSDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A + GV       +     +++ D   I +D F RT    H +  + ++K + + G I
Sbjct: 71  TKALSEGVDPATLCAKYHAIHKEIYDWFRIDFDTFGRTPTDEHTEIVQSVFKHLWNNGYI 130

Query: 120 YKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEE--------- 162
            +   +  Y    E++  D            KGA G   +A  N +  ME          
Sbjct: 131 EQRETTQAYCPEHESFLADRYVEGECSLCHDKGARGDQCDACGNLLDPMEPDLDASGNQE 190

Query: 163 ------------------------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
                                   +  + RL A Q ++ ++  S  +        +   S
Sbjct: 191 TKATGWLINPKCKLDGTTPIKRQTKHLYLRLDALQGEIETWIASAKK-DWSANCTSITYS 249

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQ---------YIMYVWIDALTNYLTTTGYLDN-- 247
           ++  GLK   ++R    WG+ IP              + YVW DA   Y + T    +  
Sbjct: 250 WLDQGLKPRGITRD-LKWGVPIPTGLDGLSEEDFAKKVFYVWFDACIGYPSITKTFTDAG 308

Query: 248 ----PDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILH 298
                +  K    P ++     +GKD + FH I WPA  + +     K   + +  ++ +
Sbjct: 309 NPSGTNWEKWWKNPEEVSLYQFMGKDNVPFHTIIWPASQIGSKENWTKVKTLSTTEYLNY 368

Query: 299 KGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           +G K SKS G  +      +  +  D  R++L+       D  +  +      N DL   
Sbjct: 369 EGGKFSKSKGVGVFGNNARDTGIDPDIWRFYLLSRRPETSDSEFKWEEFVDVNNNDLLKN 428

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           +GNL  R +         ++P        + +      +++L E    ++   +   L+ 
Sbjct: 429 LGNLCQRVIKFTQAKMGSVVPDFDLSKFPALQQHKDEVNKLLHEYNTTLRGLKLRHGLSV 488

Query: 417 VISLVSEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++++    ++     K   +L    P+R + V+ + +  I  LA +L  ++P  +  I  
Sbjct: 489 IMAISGLGNKLLQDNKLGNQLIAEEPERCNAVIGIALNHIHLLANVLAPYMPGKSQAILK 548

Query: 476 ILFVADENRCFQSLD----QRLKPGFMLHKT 502
            L    E +    LD      +KPG  L + 
Sbjct: 549 QLGFDGEGQTASILDVWEADAIKPGHKLGEP 579


>gi|322434798|ref|YP_004217010.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162525|gb|ADW68230.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 848

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 186/630 (29%), Positives = 271/630 (43%), Gaps = 135/630 (21%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y++T I Y NA+PHIGHAY  I+ADVLAR  R  G    F TGTDEHGQKI ++A  AG
Sbjct: 8   FYVTTPIYYVNARPHIGHAYTTIVADVLARRARAQGTPTWFLTGTDEHGQKIERSALAAG 67

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +  + F DQ S +FRD+   + I+ D +IRTT++ H    + L+  +  KG IY   Y+G
Sbjct: 68  IPPQTFTDQVSASFRDLWKRMGITNDQYIRTTDEAHKKGVQKLFADLHAKGQIYLSTYTG 127

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            YS+ +E +        G DG        P + + EE +FFRLS YQ  LL+  ES    
Sbjct: 128 QYSIGEEMFVEGPPGTIGPDG-------KPTETVTEENFFFRLSDYQLPLLNLIESDTLK 180

Query: 187 ILPIERRNEVISFVKSG------------------------------LKDLSLSRKTFDW 216
           I P  R+NEV+SF++                                LKDLS+SR +F W
Sbjct: 181 ITPEARKNEVLSFLRGNTSGAPGPDSGTWVSTDLKQSAKGILYLPGALKDLSVSRSSFTW 240

Query: 217 GIKIPD------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---------------- 254
           GI +P+        ++++YVW+DAL NY+T  GY  +      K                
Sbjct: 241 GIPVPEPAASEAKEKHVIYVWLDALANYITALGYGSDDTTQFEKFWPADIHLVGKEIIRF 300

Query: 255 ---FWPADLHVIGKDI-----LRFHAIYWPAFLLSAN----------------LPLPKKV 290
              +WPA L   G D+          ++  + +  +                 LP P  +
Sbjct: 301 HCVYWPAFLLAAGLDLPKAVTAHGWLLFDDSKMSKSKGNIVRTETILDAFGTLLPPPAAL 360

Query: 291 FSHGFIL-HKGEKISKSLGN--------------VIDPIEVIEEVGVDALRYFLVREIAC 335
            S    L  +G       G                    +  +    D LRYFL+REI  
Sbjct: 361 TSDALALGIRGGLQPPVNGTENEGALAPGSPTPPPEPTKQDQDLFAADVLRYFLLREIPF 420

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-------------GA 382
           G+DG +  + L  R NADLANG GNLVSR+++MI K +DG++P                 
Sbjct: 421 GQDGSFTFEALITRYNADLANGYGNLVSRTLNMIHKYFDGVVPPSWVSSNSVVLESSVKE 480

Query: 383 FTESDE---------SILSVCSRVLQ---EIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
               D           +  + S  +     +  N Q    ++AL     L+  +D    +
Sbjct: 481 SQLFDRFVNDNSSGTWVTRLPSEAVALSLAVGRNTQLLRFNKALEACSELIRLLDSDLTS 540

Query: 431 QKPWELK-----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           + PW++          ++ ++VLY   E IR +  LL   +P    K++  L + D    
Sbjct: 541 KAPWKVIVGLSDDEMQEKRASVLYTAAESIRIITALLHPILPYATAKVWHQLGLGDIELA 600

Query: 486 FQS------LDQRLKPGFMLHKTFDPIFPR 509
             +          L+PG  L     PIFPR
Sbjct: 601 AANGELKNLTWGGLQPGTKLG-PLSPIFPR 629


>gi|322710337|gb|EFZ01912.1| methionyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 644

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 112/550 (20%), Positives = 217/550 (39%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + +++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G    
Sbjct: 10  VEGKRNILVTSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G T +   D+     +++ D  +I +D F RTT ++  +  + ++ K+ + G +
Sbjct: 70  TKALETGQTPQQLCDEFHVKHKEVYDWFEIGFDHFGRTTTQKQTEIVQDIFLKLHENGFL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +   +  Y  + + Y  D  V        Y  A G   +     +   E      ++  
Sbjct: 130 EERTTTQPYCEKHDGYLADRFVEGTCPKCGYDDARGDQCDKCGGLLDPFELINPRCKVDG 189

Query: 172 YQDKL------------------LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            Q                       + E+H ++  P        S++  GL+  S++R  
Sbjct: 190 AQPIPRDTKHIFLKLDMLQSDIEKWFEEAHKKYGWPQNGVGITQSWLTKGLEGRSITRD- 248

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  I +P   + ++YVW DA   Y + T    +      K  P ++     +GKD +
Sbjct: 249 LKWGVPIPLPGYEKKVIYVWFDACIGYPSITANYTDEWEKWWKN-PDNVTLYQFMGKDNV 307

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P   +           + +  ++ ++  K SKS G  +   +V +  +     
Sbjct: 308 PFHTVIFPGSEIGTGYKWTMLNHLSTTEYLNYENGKFSKSRGVGVFGNQVKDIGISPSVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L+       D  ++        N++L    GN V+R V  +    DG +P   A   
Sbjct: 368 RYYLLSNRPESGDTQFEWQNFVLANNSELLANFGNFVNRIVKFVNAKCDGTVPEFSATYT 427

Query: 386 SDE-----SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            D       IL   + +L E  + M+   I   + +++ + +E +     +         
Sbjct: 428 DDTFDFAGWIL-RINALLSEYVDLMEKVHIRAGVKKLMEISTEGNMLLQYRLDNTNLVEK 486

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P+R  TV+ + + +   LA L   ++P  +  I   L             + LKPG  + 
Sbjct: 487 PERTKTVIGLALNLCHLLASLASPYMPSTSESICKQLNTTLAFIPDVWDPEILKPGHKIG 546

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 547 KAAY-LFTRI 555


>gi|151943449|gb|EDN61760.1| mitochondrial methionyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190406813|gb|EDV10080.1| methionine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207345027|gb|EDZ71977.1| YGR171Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272049|gb|EEU07062.1| Msm1p [Saccharomyces cerevisiae JAY291]
 gi|259146676|emb|CAY79933.1| Msm1p [Saccharomyces cerevisiae EC1118]
 gi|323337473|gb|EGA78721.1| Msm1p [Saccharomyces cerevisiae Vin13]
 gi|323348442|gb|EGA82687.1| Msm1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354852|gb|EGA86685.1| Msm1p [Saccharomyces cerevisiae VL3]
          Length = 575

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 170/523 (32%), Positives = 264/523 (50%), Gaps = 49/523 (9%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++T I YPNA+PH+GH Y  +++DV  R+    G    FTTGTDEHG KI  A+++ G  
Sbjct: 17  VTTPIFYPNAKPHLGHLYSSLLSDVYHRWQLFKGNLSFFTTGTDEHGLKIQCASESNGFD 76

Query: 69  -TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             K FVD+    F  +  +  I+Y  FIRTT+  H +    LW+     G IY G + GW
Sbjct: 77  QPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVVKLWELCLKNGYIYMGEHKGW 136

Query: 128 YSLRDEAYYNDDEVYKG--ADGQYYNAQ-HNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           YS+ DE +Y + +V K    DG+Y N +  N V +  E  YFFRLS +  K++ +   +P
Sbjct: 137 YSISDETFYPESKVIKDPKNDGKYLNTESKNEVVYQSETNYFFRLSLFNKKIVDHIRKNP 196

Query: 185 EFILPIERRNEVISFVKSG--LKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNY-- 238
           +FI P  +R++++  +++G  L DLS+SR      WGI  P+DP   +YVW DAL NY  
Sbjct: 197 DFIFPASKRDQILKELETGGTLPDLSISRPSARLKWGIPTPNDPSQKVYVWFDALCNYLS 256

Query: 239 ----------------LTTTGYLDNPDGSKAKFWP-----ADLHVIGKDILRFHAIYWPA 277
                                   N  G     +P       +HVIGKDI +FH +YWP+
Sbjct: 257 SIGGIPSILSNATEVVSRHYSDKSNVKGQLLIPYPKEVQRNTIHVIGKDIAKFHTVYWPS 316

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           FLL+A LPLP+++  HG  L  G K+SKSLGNV+DPI++    G D +R+FL+      +
Sbjct: 317 FLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGNVVDPIDMARYYGADIVRWFLLENSKLEE 376

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS--------------MILKDYDGMIPTPGAF 383
           DG + +  L +     L +  GNL++R                      +  +       
Sbjct: 377 DGDFQEAKLYE-TRELLVSKWGNLINRCCGSKFNIERAVMKFSDKANFQFQEIFQNEPIV 435

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +E  E++  + ++  +   E +      + L  V S++++ +      KPWE      D+
Sbjct: 436 SERIENLAKLLNKSQEVFDEKIAIFQYPQLLRHVWSIINDANTLVQNSKPWER---ELDQ 492

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              ++++ +E  R L+IL Q+ +P L+    D + V+ E R  
Sbjct: 493 QDNIIFLAMETSRILSILCQSIIPSLSQSFLDRIDVSKEKRTI 535


>gi|119384777|ref|YP_915833.1| methionyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|187647740|sp|A1B3P3|SYM_PARDP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119374544|gb|ABL70137.1| methionyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 572

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 118/557 (21%), Positives = 232/557 (41%), Gaps = 56/557 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R    +V+F   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRDNEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG    V+  +      ++A    +S+D F R++ +R+H   +    K+ + G I +   
Sbjct: 63  AGKPIAVYCAEMHEVQAEIARNFGLSFDHFGRSSSERNHVLTQHFAGKLDENGYIAEVEE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----------- 162
              YS+ D  +  D  +            +G   +    Q +P   +E            
Sbjct: 123 RQVYSIDDGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTNLE 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  + R  + +D++ ++ +S  ++ +              GL+D  ++R   DWGI
Sbjct: 183 VRATKHLYLRQRSLKDRIAAWIDSKTDWPILTTSIARKWLNDGDGLQDRGITRD-LDWGI 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD-------- 259
            +             + YVW DA   Y+  T    +  G       ++W  D        
Sbjct: 242 PVKKGDKPWPGMEGKVFYVWFDAPIEYIAATAEGADKRGEPDSAWRRWWRLDEGAEDVTY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 TQFMGKDNVPFHTLSFPATIIGSGEPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  D  ++ VN DLA+ +GN VSR        +   I
Sbjct: 362 SILPADYWRWWLLSHAPESGDSEFTWDNFQQSVNKDLADVLGNFVSRITKFCRSKFGETI 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G++   +E+++   +  ++     M +  + ++ A++ ++    + Y  +  PW   
Sbjct: 422 PQGGSYGPEEEALIQALTTRIRAYEGFMDHVEVRKSAAELRAIWVLGNEYLQSAAPWSTF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ----SLDQRL 493
           KT+PD+A+  + + + +IR  A+L   F+P  A+ +   +    ENR +     +  + L
Sbjct: 482 KTDPDKAAMQVRLGLNLIRLYAVLSAPFIPFAADAMLAAMQT--ENRDWPDDVRAALEAL 539

Query: 494 KPGFMLHKTFDPIFPRF 510
             G       + +F + 
Sbjct: 540 PAGHAFT-VPEVLFAKI 555


>gi|254468593|ref|ZP_05081999.1| methionyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087403|gb|EDZ64686.1| methionyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 675

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 125/518 (24%), Positives = 217/518 (41%), Gaps = 42/518 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++ I++A+ Y N   H+GH  E I  D+ +R+ +++G +V +    D HG  I   AQN
Sbjct: 2   RRILITSALPYANGSIHLGHLVEYIQTDIWSRYQKMNGHEVFYVCADDTHGTPIMIKAQN 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K  +    +          +++D+F  T  K +      ++K +     I     
Sbjct: 62  EGITPKQLIANVHKEHAQDFADFYVNFDNFYTTDSKENQLYSEEIFKSLDRNKKISTKEI 121

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------------W 159
             ++    + +  D  +             G   +   A ++P                 
Sbjct: 122 EQYFDEDKQMFLPDRFIKGECPKCNVKDQYGDSCEACGATYSPTDLVNPYSALSGTTPIK 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + + +FF LS  +  L  +  S     L  E  N++  + KSGL+D  ++R    +G  
Sbjct: 182 KKTKHFFFNLSECEQFLKDWTTSGT---LQFEAENKIQEWFKSGLQDWDITRDKPYFGFL 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGY--LDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +         + +   FW  D      H IGKDIL FHA
Sbjct: 239 IPGETDKYFYVWLDAPIGYMASFKNLIDQKGNINFDDFWSPDSSTELYHFIGKDILYFHA 298

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L  A    P K+F+HGF+   GEK+SKS G  I     +  +       +    
Sbjct: 299 LFWPATLNFAGFRKPTKIFAHGFLTVNGEKMSKSRGTFITARSFLNNINEPEFLRYYFAS 358

Query: 333 --IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE-- 388
                  D   + D L  +VN+DL   + N+ SR+   I K ++G I +        +  
Sbjct: 359 KLNDSMSDIDLNLDDLMSKVNSDLVGKLVNIPSRTFGFIHKLFNGKIKSIDQLASDSKYS 418

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT---NPDRAS 445
            ++     +  EI +  +++L  + + +V +LV EV+     ++PW L K    N  +  
Sbjct: 419 QLVIKSIDLKSEILDLYESRLYSQLVRKVFTLVEEVNELISDEQPWSLAKDLEQNKVQLH 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +L  +  V R   I L   +P L+ ++  +    D N
Sbjct: 479 NILTTSAIVFRNSIIYLSPILPNLSKEVASLFNETDFN 516


>gi|149179757|ref|ZP_01858262.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851949|gb|EDL66094.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 549

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 116/533 (21%), Positives = 211/533 (39%), Gaps = 37/533 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR+HRL G DVL+ +G+D +G  I   A   G
Sbjct: 12  VFIGGAWPYANGSLHVGHLAALLPGDILARYHRLKGEDVLYVSGSDCNGTPIEIRAHQEG 71

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V  +   D+  + F D    L  SYD + RT    HH   + ++  + D G +Y+     
Sbjct: 72  VKVRDIADRYHQEFLDCFQKLGFSYDQYGRTDSANHHQEVQKIFLTLKDNGFLYEKTTEE 131

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            + L  + +  D  V           +G          +P + ++             + 
Sbjct: 132 TFCLHCDRFLPDRFVEGTCPNCNEKARGDQCDGCGTILDPRELIDRHCKLCGNPPSLKET 191

Query: 177 LSYYESHP----------EFILPIERRNEVISFVKSGLKDLSLSRKTFDWG----IKIPD 222
             +Y +                   R N      +   + L     T D G    + +  
Sbjct: 192 AHFYLALSLLEEELKDYLNKNKGKWRENAEALTRRYINEGLHDRAATRDIGTGVDVPVEG 251

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIYWPAF 278
                +YVWI+A++ YLT +           + +        +V GKD + FH I WPA 
Sbjct: 252 YNDKKIYVWIEAVSGYLTGSIEWGEKHERDWRKFWDKEAVSYYVHGKDNIPFHTIIWPAI 311

Query: 279 LLSANLP-LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L   N   LP  + S  ++  + +KIS S    +   +V+++   D LRY+        +
Sbjct: 312 LKGLNSDGLPDWIVSSEYVTLEKKKISTSKDWAVWLPDVLKDYHPDTLRYYFSANYPDKR 371

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +       + N++L   +GN + R+V    K++             D  ++     V
Sbjct: 372 DADFSWREFILKHNSELVGSLGNFIQRTVKFYRKEFG----ESAVLETIDPIVVRELYTV 427

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            ++  E ++     +A  +   +V   ++YFD ++PW + K + + A  +L   + +   
Sbjct: 428 FRQTGELIEEGECRKAAKRAFEIVRWGNKYFDDKQPWRVIKEDRNEARFILESCLYISIN 487

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L+ LL  F+P  A +I     + +      S +  + P  +  +   P+F R 
Sbjct: 488 LSQLLSPFIPFSAEEILKQFQIKET----ASWEPFILPVEINTEGQKPLFTRI 536


>gi|310797897|gb|EFQ32790.1| methionyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 674

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 125/577 (21%), Positives = 223/577 (38%), Gaps = 72/577 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV AR+ R  G   ++  G+DE+G    
Sbjct: 9   VKGKNNVLITSALPYVNNVPHLGNIIGSVLSADVFARYSRARGNPTVYVCGSDEYGTATE 68

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT      +     + + D  DIS+D F RT   +  +  + ++ K+   G I
Sbjct: 69  TKALEEGVTPSELCAKYHALHKGIYDYFDISFDIFGRTPTPQQTEIVQDIFTKLWKNGFI 128

Query: 120 YKGCYSGWYSL--RDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEE------ 163
            +   +  +      +++  D  V        Y GA G   +   N +  +E E      
Sbjct: 129 EERETTQPFCPVEAHQSFLADRFVEGVCSICAYDGARGDQCDKCGNLLDPLEPEPEANAT 188

Query: 164 -----------------------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-- 198
                                      R + +    L               +    S  
Sbjct: 189 AEDDIAAKPTGFLIKPRCKLDGATPEKRKTKHLFLRLDSLRDELVKWFKESSKKGAWSNN 248

Query: 199 -------FVKSGLKDLSLSRKTFDWGIKIPDDP------QYIMYVWIDALTNYLTTTGYL 245
                  ++  GLK   ++R    WG+ IP         + + YVW DA   Y++ T   
Sbjct: 249 AEQITQAWIDKGLKPRGITRD-LKWGVPIPTHEVGQDYAKKVFYVWFDACIGYVSITKNY 307

Query: 246 DNPDGSKAKFW------PADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHG 294
            + D    K W      P D+     +GKD ++FH I +P  L+       K  K+ +  
Sbjct: 308 TDGDDLAGKKWEQWWKNPDDVKLYQFMGKDNVQFHTIIFPGSLIGTGENWTKLHKISTTE 367

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           ++ ++G K SKS G  +   +V +  V VD  RY+L+       D  +    +    N +
Sbjct: 368 YLNYEGGKFSKSRGVGVFGNQVQQTGVPVDVWRYYLLSRRPETSDSEFMWQEMVDGNNNE 427

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHR 412
           L   +GN   R         DG++P    +T+   +  +   + +L+E   NM+   +  
Sbjct: 428 LLKNLGNFCQRVNKFCQAKTDGVVPDYTKYTDDYLKKHIGEVNTLLKEYISNMEATKMRA 487

Query: 413 ALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            L  ++S+ +  ++     K    L    PDR + V+ + +  I  LA L+  ++P  + 
Sbjct: 488 GLQTIMSISALGNKLLQDNKLDNRLLTEEPDRCAAVVGLALNQIDLLASLVAPYLPNTST 547

Query: 472 KIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIF 507
            I   L V  +     +     +KPG  L  T + +F
Sbjct: 548 AILKQLGVEPKPFIPDTWVTDAIKPGHKLG-TPEHLF 583


>gi|110679753|ref|YP_682760.1| methionyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123361874|sp|Q166L9|SYM_ROSDO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109455869|gb|ABG32074.1| methionyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 572

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 118/556 (21%), Positives = 221/556 (39%), Gaps = 52/556 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA 
Sbjct: 2   ERHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG     +  +      ++A    +S+D F R++  ++H   +    K+ +   I +  
Sbjct: 62  KAGKPVDEYCAEMHAIQSEIAKGFRLSFDHFGRSSSAQNHRLTQHFAGKLDEANLIDEVI 121

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV--------------- 157
               YS  D  +  D  +            +G   +    Q +P                
Sbjct: 122 EKQVYSHADGRFLPDRYIEGTCPNCAYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +  E +  + + S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWG
Sbjct: 182 EVRETKHLYLKQSVLKDQLDAWIDSKTDWPVLTTSIAKKWLHDGDGLRDRGITRD-LDWG 240

Query: 218 IKIPDD-------PQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD------- 259
           I +             + YVW DA   Y+          +       ++W  D       
Sbjct: 241 IPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANNLEQSDWERWWRTDKGADDVR 300

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               +GKD + FH + +PA LL +  P      + S  ++ + G + S S G  I   + 
Sbjct: 301 YTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQA 360

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   
Sbjct: 361 LELLPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNFVSRITKFCAAKFGSE 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  GA+  ++  +L+     L   ++ M    + ++  ++ ++ +  + Y     PW +
Sbjct: 421 VPAGGAYGSAELELLTKLDESLTRYQDYMGAMEVRKSAQELRAIWASGNEYLQTVAPWSV 480

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLK 494
            KT+P+ A+    + + +     +L   FVP  + KI   L            D    +K
Sbjct: 481 FKTDPETAAMQTRLGLNLALLFGVLSSPFVPDASEKILKCLGHPSARWPDTCTDFVTSMK 540

Query: 495 PGFMLHKTFDPIFPRF 510
           PG    +  + +F + 
Sbjct: 541 PGDPF-EVPEVLFAKL 555


>gi|258568590|ref|XP_002585039.1| methionyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906485|gb|EEP80886.1| methionyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 657

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 118/543 (21%), Positives = 219/543 (40%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGQRNILITSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +   I +D F RT  ++H +  + ++K++ D G + 
Sbjct: 71  KALEEGVTPEQLCAKYNKIHQEVYEWFGIGFDIFGRTPTQKHTEISQRIFKRLYDNGFLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      Y  + E++              Y  A G   +   N +   +           
Sbjct: 131 EKTAEQPYCEKHESFLADRYVEGECPRCHYDDARGDQCDKCGNLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 191 TPVSRPTKHIHLLLDKLQPQIEEWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P +     ++YVW +A   Y + T    +      +  P D+     +GKD + 
Sbjct: 250 KWGVPVPLEGYENKVLYVWFEACIGYPSITANYTDDWELWWRS-PEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYESGKFSKSRGIGVFGNNAKDTGIPADVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 369 YYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSGVVPDFTVQE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           S   +L   + +L++  E M+   +   LA  + +    +    + K    L    P+RA
Sbjct: 429 SFNPVLDDITTILRQYIEEMETVHLRAGLATAMRVAEAGNNLIQSNKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKP-----GFM 498
           +TV+ + + +I   A +   ++P  +  I + L     N    + L    KP     G  
Sbjct: 489 ATVVGIVINLIHLCASVFSPYLPATSKSILEQLDAPFANIPSLEDLKDGWKPTAIKGGHK 548

Query: 499 LHK 501
           + K
Sbjct: 549 IGK 551


>gi|119953372|ref|YP_945581.1| methionyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782854|sp|A1R019|SYM_BORT9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119862143|gb|AAX17911.1| methionyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 726

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 114/511 (22%), Positives = 213/511 (41%), Gaps = 37/511 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+  +D L+  GTDE+G      A 
Sbjct: 2   KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMDIDTLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT K H  T + L+ K+   G I    
Sbjct: 62  IEKTTPEELCNRYYAIHKSIYEWFNIKFDIFGRTTNKSHKQTVQDLFLKLEKNGYITDKE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQ---------HNPVQWMEEEGYFF 167
              ++  +D+ +  D  V            G                NP   + +     
Sbjct: 122 SEQFFCQQDQMFLADRYVTGECPNCGNNAKGDQCENCSKLLAPIDLINPKCIICKNIPII 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++     +     N   +         F++ GLK+ +++R    WGI
Sbjct: 182 KTTKHLYINLPKIKNELIHWMQTTEHNTNWNTNAIKTTNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH + 
Sbjct: 241 PVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNKETNLVQFIGKDNILFHTVI 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +PA  L +        K+ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPAIKLGSKENWTMLGKLASSEYLNYEHLKFSKSAGIGIFGNDVITTGISADIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +  D   +R+N++L     NLV+R ++   K +   I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWDDFMERINSELIGNFSNLVNRVLTFYKKFFGDKIDTIEIKEDFWKEIN 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + L       +   +  AL +++ +    ++ F  ++PW+ K + P +   +L   
Sbjct: 421 LKYDKTL----NFFKQIELKSALKEILDISRIGNKIFQDKEPWKTKDSTPKKTKELLLNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + +IR L+IL+  F+P  ++KI      + E
Sbjct: 477 IYLIRDLSILISPFIPHTSDKIRRFFGESYE 507


>gi|15897480|ref|NP_342085.1| methionyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174797|ref|ZP_06388766.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|25009409|sp|Q9UWW2|SYM_SULSO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|6015914|emb|CAB57741.1| methionyl-trna synthetase [Sulfolobus solfataricus P2]
 gi|13813723|gb|AAK40875.1| Methionyl-tRNA synthetase (metS) [Sulfolobus solfataricus P2]
 gi|261602240|gb|ACX91843.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 573

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 139/549 (25%), Positives = 245/549 (44%), Gaps = 49/549 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ ++ A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 2   KVLVTAAWPYVNSVPHLGNLIGSILSADVFARYARLRYGKENVLFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               V  K   DQ     R +  +V  IS+D++ RT  + H    R    K++    + +
Sbjct: 62  IKRKVNPKELTDQAHEYDRHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYIKVSE 121

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYY---------------NAQHNPV 157
                  + +             Y   E  +G                          PV
Sbjct: 122 DEIPYCENDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKTPV 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            + + + +FF LS + DK+  +  S  E   P   ++  +S+V  GLK  S++R    WG
Sbjct: 182 -FKKTKHWFFDLSEFNDKIRGWISSSNEM--PDNVKSVALSWVGEGLKPRSITRDN-KWG 237

Query: 218 IKIPDD--PQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWP-----ADLHVIGKDIL 268
           I  P +      +YVW +AL  Y+      +    D  K K +         + IGKD +
Sbjct: 238 IPAPFEGAQDKSIYVWFEALLGYISAVIEYFERKGDQEKWKEYWFGPNIKSYYFIGKDNI 297

Query: 269 RFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FHA+  PA L+++     LP  + +  ++L++G+K SKS    +   E  E + V+  R
Sbjct: 298 PFHAVILPAMLMASEEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWIDEAPELMDVEYWR 357

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFT 384
           + L+R     KD  +      + VN +L + IGN V+R +SM+ + Y G++P        
Sbjct: 358 FVLIRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRVLSMVNRYYSGIVPEFKIDILD 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-R 443
           ++D  I+S+ +   + + +  +   +     +++  V E + Y + + PW+L K+  +  
Sbjct: 418 DNDRKIISLINETPKVVGDLFEKGKLKAGTEEMLKFVRECNAYLNMKAPWDLYKSGKEIE 477

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR-LKPGFMLHK 501
               LY+    ++ +AILL   +P  A KI+++L + + EN  +       + PG  + K
Sbjct: 478 LKNTLYIGTNSVKTIAILLYPLMPSHAQKIYEMLNMGNIENEKWDVASTLSVNPGHKIGK 537

Query: 502 TFDPIFPRF 510
             + +F + 
Sbjct: 538 -VNVLFKKL 545


>gi|303320629|ref|XP_003070314.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110000|gb|EER28169.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 657

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/543 (21%), Positives = 221/543 (40%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++   G + 
Sbjct: 71  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
           +      +  + +++              Y  A G   +            NP   ++  
Sbjct: 131 EKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 191 TPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDILR 269
            WG+ +P +     ++YVW +A   Y + T    +      +  P D+     +GKD + 
Sbjct: 250 KWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDDWELWWRN-PEDVRLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L    N  +   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 309 FHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 369 YYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPDFTIPE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           S   IL   + +L++  E M+   +   L   + +    +    + K    L    P+RA
Sbjct: 429 SFNPILDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKP-----GFM 498
           +TV+ +   +I   A +   ++P  +  I + L    +N    + L    KP     G  
Sbjct: 489 ATVVGIVTNLIHLCASVFSPYLPATSKSILEQLNAPFKNIPSLEDLKDGWKPTAIKAGHK 548

Query: 499 LHK 501
           + K
Sbjct: 549 IGK 551


>gi|322694565|gb|EFY86391.1| methionyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 643

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/550 (20%), Positives = 216/550 (39%), Gaps = 44/550 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + I++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G    
Sbjct: 10  VEGKRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G T +   D+     +++ D  +I +D F RTT ++  +  + ++ K+ + G +
Sbjct: 70  TKALETGQTPQQLCDEFHVKHKEVYDWFEIGFDHFGRTTTQKQTEIVQDIFLKLHENGFL 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +   +  Y  + + Y  D  V        Y  A G   +     +   E      ++  
Sbjct: 130 EERTTTQPYCEKHDGYLADRFVEGTCPKCGYDDARGDQCDKCGGLLDPFELINPRCKVDG 189

Query: 172 YQDKL------------------LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            Q                       + E+H ++  P        S++  GL+  S++R  
Sbjct: 190 AQPIPRDTKHIFLKLDRLQSDIEKWFEEAHKKYGWPQNGVGITQSWLTKGLEGRSITRD- 248

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  I +P   + ++YVW DA   Y + T    +      K  P ++     +GKD +
Sbjct: 249 LKWGVPIPLPGYEKKVIYVWFDACIGYPSITANYTDEWEKWWKN-PDNVTLYQFMGKDNV 307

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
            FH + +P   +           + +  ++ ++  K SKS G  +   +V +  +     
Sbjct: 308 PFHTVIFPGSEIGTGYKWTMLNHLSTTEYLNYENGKFSKSRGVGVFGNQVKDIGISPSVW 367

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RY+L+       D  ++        N++L    GN V+R V  +    DG +P   A   
Sbjct: 368 RYYLLSNRPESGDTQFEWQNFVLANNSELLANFGNFVNRIVKFVNAKCDGTVPEFSATYT 427

Query: 386 SDE-----SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            D       IL   + +L E  + M+   I   + +++ + +E +     +         
Sbjct: 428 DDTFDFAGWIL-RVNALLSEYVDLMEKVHIRAGVKKLMEISTEGNTLLQYRLDNTNLVEK 486

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           P+R  TV+ + + +   LA L   ++P  +  I   L             + LK G  + 
Sbjct: 487 PERTKTVIGLALNLCHLLASLASPYMPSTSESICKQLNTTLAFIPDVWDPEILKTGHKIG 546

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 547 KAAY-LFTRI 555


>gi|15921721|ref|NP_377390.1| methionyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|25009384|sp|Q971C1|SYM_SULTO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15622508|dbj|BAB66499.1| 571aa long hypothetical methionyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 571

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 136/546 (24%), Positives = 244/546 (44%), Gaps = 46/546 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLD--GLDVLFTTGTDEHGQKIAKAA 62
           K+++++A  Y NA PH+G+    ++ ADV AR+ RL     +V+F +G+DEHG  I   A
Sbjct: 2   KIFVASAWPYVNAVPHLGNLIGSVLSADVFARYARLKYGQENVVFVSGSDEHGTPIEVEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +   V  K   DQ     + +  DV +ISY+++ RT  + H    R    K+     I +
Sbjct: 62  KKRNVNPKELTDQAHEYDKKLFLDVWEISYNNYTRTESEIHKTFVRDFMLKLEKYIKIEE 121

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYYNAQHNPV--------------Q 158
                    +             Y   E  +G           P                
Sbjct: 122 DEIPYCEYDKIYLPDRFVKGTCPYCGFEDARGDQCDNCGRLLTPRLLVNPKCVLCGRTPV 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + + + +FF LSA+ DK+  +        LP   ++  +S+VK GLK  S++R    WGI
Sbjct: 182 FKKTKHWFFDLSAFNDKIEEWI--KNSQTLPENVKSVALSWVKEGLKPRSITRDN-AWGI 238

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADL---HVIGKDILR 269
             P +      +YVW +AL  Y++ T             K  ++  D+   + IGKD + 
Sbjct: 239 PAPFEGAEGKTIYVWFEALLGYISATIEYFKKIGKEEEWKKFWFGNDVKSYYFIGKDNIP 298

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FHA+  PA L+++  N  LP  + +  ++L++G+K SKS    +   E  + + ++  R+
Sbjct: 299 FHAVILPAMLMASGENYVLPTVIAATEYLLYEGQKFSKSRKIGVWIDEAPQLLDIEYWRF 358

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
            L+R     +D  +      + VN +L + IGN  +R +SM+ + ++G +P        +
Sbjct: 359 ILIRLRPEERDTNFTWREALRIVNTELNDDIGNYANRVLSMVRRYFNGEVPQIKYEKLKD 418

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            D   +S      +++ E  +   +     +++ L    + Y + + PW L K + + A 
Sbjct: 419 EDTKFISEIKEAPKKMSELFELGKLKAGSEEILKLARNGNSYLNIRAPWNLIKNDKEEAG 478

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL--KPGFMLHKTF 503
            VL + V  +R L+I+L   +PK A K++++L   D  R    L   L  K    +++  
Sbjct: 479 NVLNIAVNSLRTLSIMLYPLMPKSAEKLYNMLGFKDIEREKWDLAGELVIKSNHKINE-V 537

Query: 504 DPIFPR 509
             +F +
Sbjct: 538 SVLFKK 543


>gi|21672394|ref|NP_660461.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654289|sp|Q9ZHD7|SYM_BUCAP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21623001|gb|AAM67672.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 545

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 238/541 (43%), Gaps = 40/541 (7%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  + +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+   +V F +  D HG  I 
Sbjct: 1   MSNKFKKILVTCALPYANGPIHIGHMLEHIQADIWVRYQRMRNNEVWFISSDDAHGTAIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             ++  G+T    + +            +IS+D++  T    +    R ++  +S++  I
Sbjct: 61  LKSEKLGITPIKLIKKIKEEHIIDFSNFNISHDNYHSTHCVENLFLLRKIFLSLSEQKLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +     +Y    + +  D            K  +G       +  +  +       +S 
Sbjct: 121 NEKKIFQFYDNTKKMFLPDRFIKGTCPFCSSKNQNGDNCEICGSIYEPTDLVNPISVISN 180

Query: 172 YQDKLLSYYESHPEFILPIERRNEVI--------------SFVKSGLKDLSLSRKTFDWG 217
               L +    +    L     N+ I               ++KSGLK+  +SR    +G
Sbjct: 181 SVPILKNTTHLYFNLPLFTNMLNKWIHSGILEKSVAKKTEEWLKSGLKEWGISRDAPYFG 240

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRF 270
            KIP   +   YVW+DA   Y++        +      +FW  +      H IGKDI+ F
Sbjct: 241 FKIPKFDKKYFYVWLDAPVGYISAFKNFCTKNKKVDFNEFWKKESKCELYHFIGKDIIYF 300

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H ++WPA L +++   P  +F HG +   G K+SKS G +I   + I+    D+LRY+  
Sbjct: 301 HTLFWPAILEASSYRKPNGIFVHGHLTINGLKLSKSRGFLIKASDWIKCFDSDSLRYYYA 360

Query: 331 REIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            +++    D   + +   +++N+D+ N + NL SR+ S I K +DG +    A +  D +
Sbjct: 361 SKLSNNINDIEINLEDFIQKINSDIVNKLVNLASRNASFIHKYFDGYL----ADSLGDCN 416

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +      + ++I    +N+     + + + L+   ++Y + ++PW++K+ N ++  T+  
Sbjct: 417 LYQDFIDISKKIANFFENRQFSSVIRECMKLLDLANQYINQREPWKIKQDNFNKLHTICT 476

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           V + + R + I L+  +P LA K    L     +  ++ +D+ L     + K F  ++ R
Sbjct: 477 VGINLFRLVVIFLKPIIPDLAKKTEYFL---ISDLTWKGIDKPLLS-HKI-KKFKKLYNR 531

Query: 510 F 510
            
Sbjct: 532 I 532


>gi|2257528|dbj|BAA21422.1| methionyl-tRNA synthetase [Schizosaccharomyces pombe]
          Length = 577

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 102/550 (18%), Positives = 209/550 (38%), Gaps = 45/550 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
                + I++A+ Y N  PH+G+     + ADV AR+HR    + L+  GTDE+G     
Sbjct: 14  SNERNILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATET 73

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GV+ K   D+     +++ D  +I +D F RTT  +     + ++ K+ +   + 
Sbjct: 74  KALEEGVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMA 133

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRL 169
               +  Y    + Y  D  V            +G          N  + ++ +    R 
Sbjct: 134 IDTMTQLYCEVHQGYLADRYVEGTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRA 193

Query: 170 SAYQDKLL---------------SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           +  + +                    +S  E       R+   S++K GL+   ++R   
Sbjct: 194 TPVKRETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRD-L 252

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  +P +     ++YVW DA   Y++ T      +  K    P  +     +GKD + 
Sbjct: 253 KWGTPVPLEEFKGKVLYVWFDATIGYISITA-NYTDEWEKWWRNPEQVKLYQFMGKDNVP 311

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           FH + +P+ LL           + +  ++ ++  K SKS G  +      +  +     R
Sbjct: 312 FHTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSVWR 371

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-- 384
           Y+L+       D  +       R N++L   +GN V+R++      Y+G++P        
Sbjct: 372 YYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAKYNGLVPHYLTDPSV 431

Query: 385 ---ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTN 440
              +     +   + +L +    ++   +   L   + + +  ++Y    +   +     
Sbjct: 432 GAGKLKADFVKDVNALLAKYNAALEASKLREGLRLAMEISARGNQYLQDNRIDNKCYLYE 491

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             + +  +   + +I  LA +   ++P  +  I+  L  A       + +  L PG  + 
Sbjct: 492 RQKCADAIGYALNLIYLLAAIFYPYMPSTSTSIYKQLN-APAAAIPDTWELCLLPGHRIG 550

Query: 501 KTFDPIFPRF 510
           +  + +F R 
Sbjct: 551 EP-EYLFTRI 559


>gi|329765323|ref|ZP_08256903.1| methionyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138229|gb|EGG42485.1| methionyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 551

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 126/535 (23%), Positives = 240/535 (44%), Gaps = 39/535 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I++A+ Y N + H+GH A   + ADV  RF +L G++  +   +D+ G  I   ++ 
Sbjct: 4   KAIITSALPYANGEIHLGHVASTYLPADVTTRFLKLKGVEAYYFCASDDFGTPILIQSEK 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G T   +V   ++   D      I +D F +T+   +    + ++KK+++ G IY+   
Sbjct: 64  EGKTPSEYVAHWNKRDYDDFTAFGIDFDFFYKTSSSENIAFVQDVFKKLNNAGHIYEKEI 123

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQ---------YYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             +Y   D+ +  D  V                  +    P +  + +      +  ++K
Sbjct: 124 IQFYCKNDQKFLPDRYVKGVCPYCNASDQYSDLCESCGRVPEEISDPKCSICGQTPTKEK 183

Query: 176 LLSYYESHPEF------------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
              ++     F             L  + +  V +++KSGL D  ++R    WG+ +P D
Sbjct: 184 TTHFFFKLKNFGDALYKWLDENENLQKDVKKYVQNWIKSGLIDWDITRD-ISWGVPVPVD 242

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAF 278
                + Y W D    Y++T     +  G   K +       H IGKDI+  H ++ PA 
Sbjct: 243 NAKDKVFYGWFDNHLAYISTALKFLDNKGINGKEFWNSADIYHFIGKDIVYHHFLFLPAM 302

Query: 279 L--LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +++   LP  + + G +  + +KISKS    I   + +E    D LRY+L+      
Sbjct: 303 RLGINSEYKLPDFIPTRGHLTLQSKKISKSRNWYIGLKQFLEYYPADYLRYYLIAINPYS 362

Query: 337 KDG-FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D   +D D    R+N++L   +GN V+R++    K +DG+IP    + + D    +   
Sbjct: 363 QDDLNFDWDEFTNRINSELIGNLGNFVNRALGFTKKAFDGIIPETEPYDKKDIEAETKIK 422

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +  E+   M+   + RAL +++   S  ++YF  ++PW   K  P   + V  ++V   
Sbjct: 423 NLAGELNLLMEQNHLDRALKKIMEFSSYFNQYFQHKEPW---KKGPGTTNCVF-LSVNAA 478

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ-RLKPGFMLHKTFDPIF 507
           R +AI +  F+P+ + KI++ L  + +  +  +++L +  +K G +L     P+F
Sbjct: 479 RSMAIAIFPFIPESSQKIWEQLGFSGKVNDNKWETLSEIDVKSGHVLG-DATPLF 532


>gi|292654972|ref|YP_003534869.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371457|gb|ADE03684.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 740

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 115/576 (19%), Positives = 220/576 (38%), Gaps = 79/576 (13%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D+ +R  R  G    F +G+D HG  +A  A+  GVT
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDIYSRSLRTLGQQTAFVSGSDMHGTPVAVNAEKEGVT 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  ++   +       +I +D++  T ++ + +  + + + +  +G +Y+      Y
Sbjct: 74  PEEFALRHHEKYEATFPRFNIEFDNYGHTHDETNTELTQEIVRTLEAEGYVYEKEIPVAY 133

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
               + +  D  V            G   +                     NP ++ E E
Sbjct: 134 DPDADQWLPDRFVEGACPYCGAHARGDECDEGCGRHLEPGEIEDPTSTLTGNPAEYRERE 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD- 222
             FF +S  QD L  +             RN+   +++  L+D  ++R   DWGI  P  
Sbjct: 194 HKFFAVSDLQDYLQEFI---DRLEGTSNARNQPREWIEGELQDWCITRD-MDWGIDYPGV 249

Query: 223 ------------------------------DPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
                                             ++YVW+DA   Y+++T       G+ 
Sbjct: 250 SESAEDSEADQTESGRDEGDESDGSSSPSGTSDLVLYVWVDAPVEYVSSTKQYTERVGAD 309

Query: 253 AKFWPAD-------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              W          +H+IG+DI++ H ++WPA L  A    P+ V + GFI   G+  S 
Sbjct: 310 TFDWEVAWKDAGDIVHIIGRDIIQHHTVFWPAMLRGAGYVEPRAVMASGFITLNGKGFST 369

Query: 306 SLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           S    +   E ++E    D LRY+L       +D  +     K RVN++L   +GN + R
Sbjct: 370 SRNRAVWADEYLDEGFHPDLLRYYLATNGGFQQDVDFSWSKFKDRVNSELVGTVGNFLYR 429

Query: 365 SVSMILKDYDGMIPTPGAFTESDE----------SILSVCSRVLQEIRENMQNQLIHRAL 414
           S+    ++++G        +E+ E           + +     + E    + +  + ++ 
Sbjct: 430 SMLFAYRNFEGTPDVSELHSEASETGSRAAEVSEEVEARIEEAIDEFEAGINDYSVRKSG 489

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              + L    + Y    +PW+L   +P+ A+ V+   V++ + +A+L     P     ++
Sbjct: 490 NAAVRLAQFGNEYIQRNEPWKLTDEDPEAAAQVIRDCVQIAKAIAVLFFPVAPGKMQALW 549

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + L            D    P     +  + +F + 
Sbjct: 550 EQLGEDGSVADTGVDDAFEAPPASFGEP-EALFEKI 584


>gi|260575434|ref|ZP_05843433.1| methionyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022354|gb|EEW25651.1| methionyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 572

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/555 (20%), Positives = 229/555 (41%), Gaps = 52/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ AR+ R  G +V+F   TDEHG     AA  
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYCRARGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G   + +  +     +++A    +S+D F R++  R+H   +     ++D G I +   
Sbjct: 63  VGKPVEAYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALADNGLIEEVSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              +S+ D  +  D  +            +G   +    Q +P                +
Sbjct: 123 KQVFSITDNRFLPDRYIEGTCPNCGYTRARGDQCEECTKQLDPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  + R  A + KL ++ +S  ++ +      +       GL+D  ++R    WG+
Sbjct: 183 VRQTKHLYLRQRALRGKLEAWIDSKTDWPILTTSIAKKWLNDGDGLQDRGITRD-LHWGV 241

Query: 219 KIPDDP-------QYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD-------- 259
            +             + YVW DA   Y+  T    +  G       ++W  D        
Sbjct: 242 PVKRGEADWPGMEGKVFYVWFDAPIEYIAATAEWADAHGLPDAAWQRWWRTDLGADDVRY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ +  P      + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             +  D  R++L+       D  +  +  +  VN DLA+ +GNLVSR        +   +
Sbjct: 362 SILPADYWRWWLLSHAPESSDSEFTWENFQASVNKDLADVLGNLVSRVTKFARAKFGETV 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P  G+F   +++++   +  L+     MQ   + +A A++ +L    + Y     PW + 
Sbjct: 422 PAGGSFGPREQALIDDLTSGLRAYEACMQAMEVRKAAAELRALWVAGNEYLQNAAPWTVV 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKP 495
           KT+P+ A  ++ + + +IR  A++ Q F+P  A  +   +   D        +    L P
Sbjct: 482 KTDPEHAQAMVRLALNLIRVYAVISQPFIPDAAASMMAAMGSDDWAWPDDLAASLAALPP 541

Query: 496 GFMLHKTFDPIFPRF 510
           G       + +F + 
Sbjct: 542 GHAF-SVPEVLFAKI 555


>gi|163735330|ref|ZP_02142764.1| methionyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391339|gb|EDQ15674.1| methionyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 582

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/556 (20%), Positives = 219/556 (39%), Gaps = 52/556 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  I++AI Y N   H+G+     + AD+ AR+ R  G +VLF   TDEHG     AA 
Sbjct: 12  ERHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAA 71

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG     +  +      ++A    +S+D F R++  ++H   +    K+     I +  
Sbjct: 72  KAGKPVDQYCAEMHAIQSEIAKGFQLSFDHFGRSSSPQNHALTQHFAGKLDAANLIDEVV 131

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE---------- 162
               YS  D  +  D  +            +G   +    Q +P   +E           
Sbjct: 132 EKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 191

Query: 163 -----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                +  + + S  +D+L ++ +S  ++ +      +       GL+D  ++R   DWG
Sbjct: 192 EVRQTKHLYLKQSVLKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLRDRGITRD-LDWG 250

Query: 218 IKIPDD-------PQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPAD------- 259
           I +             + YVW DA   Y+                  ++W  D       
Sbjct: 251 IPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANGLEPSEWERWWRTDKGAEDVR 310

Query: 260 -LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               +GKD + FH + +PA LL +  P      + S  ++ + G + S S G  I   + 
Sbjct: 311 YTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQA 370

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++ +  D  R++L+       D  +  +  +  VN DLA+ +GN VSR        +   
Sbjct: 371 LDILPADYWRWWLLSHAPENSDAEFTWENFQTSVNKDLADVLGNFVSRITKFCSAKFGDQ 430

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G +  ++  +L+     L   ++NM    + ++  ++ ++ +  + Y     PW +
Sbjct: 431 VPAGGHYGPTELDLLNRLDESLTRYQDNMSAMEVRKSAQELRAIWASGNEYLQTVAPWTV 490

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLK 494
            KT+P+ A+    + + +     +L   FVP+ + KI + L           +     L 
Sbjct: 491 FKTDPETAAMQTRLGLNLALLFGVLSSPFVPEASEKILNCLGHPAAPWPNKCEDFLINLT 550

Query: 495 PGFMLHKTFDPIFPRF 510
            G    +  + +F + 
Sbjct: 551 AGEAF-EVPEVLFAKI 565


>gi|126731060|ref|ZP_01746868.1| methionyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126708362|gb|EBA07420.1| methionyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 570

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/541 (20%), Positives = 218/541 (40%), Gaps = 49/541 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++AI Y N   H+G+     + AD+ AR+ R  G +VL+   TDEHG     AA  
Sbjct: 3   RHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLYLCATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +       +A+   +S+D F R++   +    +   K + ++G I +   
Sbjct: 63  AGKPVADYCAEMHEVQAKIAEGFRLSFDHFGRSSSDANKRLTQHFAKVLDEQGLIRETSE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
           +  YS  D  +  D  +            +G        Q +PV               +
Sbjct: 123 TQMYSKADGRFLPDRYIEGTCPNCGFDSARGDQCDNCTKQLDPVDLINPHSTISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + R SA +D+L  + ++   + +      +       GL+D  ++R   DWG+
Sbjct: 183 MRETKHLYLRQSAMKDELEKWIDTREGWPVLTTSIAKKWLNDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDDPQ-------YIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +    Q        + YVW DA   Y+       +        ++W  D          
Sbjct: 242 PVMKGDQPWPGMEGKVFYVWFDAPIEYIACGQEWVDAGKGTDWERWWRTDKGADDVRYTQ 301

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +P  +L +  P      + S  ++ + G + S S G  +   + +E 
Sbjct: 302 FMGKDNVPFHTLSFPVTILGSGEPWKLVDYIKSFNYLNYDGGQFSTSRGRGVFMDQALEI 361

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L+  +    D  +  +  +  VN DLA+ +GN  SR        +   +P 
Sbjct: 362 LPADYWRWWLLSHVPETSDAEFTWESFQSGVNKDLADVLGNFASRVTKFCRSKFSEAVPE 421

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G    ++  +++  +  ++E   +M+   I +A A +       + Y     PW   KT
Sbjct: 422 GGTPGAAEAKLIADLTAKVREYETHMEAIEIRKAAAALRGAWVLGNEYLQEVAPWTTFKT 481

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGF 497
           +P++A+  + + + +IR  A++ + F+P     +   +   DE+      +  + L  G 
Sbjct: 482 DPEQAAMQIRLALNLIRLYAVISRPFIPDACADLLAAMQTDDESWPVDVPAALEMLPQGH 541

Query: 498 M 498
            
Sbjct: 542 T 542


>gi|299538180|ref|ZP_07051465.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726382|gb|EFI66972.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 544

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 120/536 (22%), Positives = 214/536 (39%), Gaps = 41/536 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + I  A  Y N   H+GH   ++  D+LAR++R  G  VL+ +G+D +G  I+  A   
Sbjct: 2   TIVIGGAWPYANGSLHLGHVAALLPGDILARYYRQKGEQVLYVSGSDCNGTPISIRAAQE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             TT+   +     F      L  +YD + RT  + HH++ + L+ ++     +YK    
Sbjct: 62  NTTTEAIANHYHDEFTRCFHDLGFTYDLYTRTDAEHHHESVKTLFLQLLANNFLYKKKIE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWME 161
             Y   D+ +  D  V                                     N     E
Sbjct: 122 QAYCETDKQFLPDRFVEGLCPNCGAKARGDQCDNCSEILDPLDLIDKRCKICGNEPVIRE 181

Query: 162 EEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIK 219
            E ++F  S +Q +L SY  ++  E             ++  G+ D +++R   +   + 
Sbjct: 182 TEHFYFTFSQFQGRLESYLAQAKVEKRWRDNALGLTERYLAEGVPDRAVTRDLPNGIDVP 241

Query: 220 IPDDPQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPA---DLHVIGKDILRFHAIYW 275
           +P      +YVWI+A+  Y   +  +      +    W       +V GKD + FH + W
Sbjct: 242 VPGFEGKKIYVWIEAVAGYLTASLKWAKEHQIAIEDLWNEETISYYVHGKDNIPFHTVIW 301

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA L+   +  LP  + S+ ++  +  K+S S    +    ++     D++RYFL     
Sbjct: 302 PAILMGIGSKALPTHIVSNEYLTLEKRKLSTSQNWAVWVPYILSRYDADSIRYFLTMNAP 361

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N +L    GN V+R++  I K +   +P      E D  I    
Sbjct: 362 ENRDTDFSWREFIYSHNGELLGAYGNFVNRTLKFIEKSFACQVPQA----EVDSDIRKQT 417

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++  E    ++     +AL  +   +   +RYFD Q+PW   K N +  +  L   V +
Sbjct: 418 VQLFNEAGVLIEGGHFKQALESIFEYIRRANRYFDEQQPWLQVKENVEAGNRTLATCVYI 477

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I  L  LL  F+P  A K+ ++L + +E    + +D        + +   P+F R 
Sbjct: 478 IANLGQLLHPFLPFSAKKVRNMLGI-NEMMWHEQVDLP-----KVIQEVTPLFERL 527


>gi|319411893|emb|CBQ73936.1| probable MES1-methionyl-tRNA synthetase [Sporisorium reilianum]
          Length = 735

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/555 (19%), Positives = 210/555 (37%), Gaps = 62/555 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + +++A+ Y N  PH+G+     + ADV AR+ R    + L+  GTDE+G      A  
Sbjct: 46  NILVTSALPYVNNVPHLGNIIGSTLSADVYARYSRSRNRNTLYICGTDEYGTATETKALE 105

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT +   D+      ++     I +D F RTT  +  +  + ++ K+ + G + +   
Sbjct: 106 DGVTPQQLCDKYHALHAEVYQWFQIGFDHFGRTTTPKQTEIAQDIFLKLHENGYLEERTM 165

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  +      +  D  V            +G         ++ V+ ++           Q
Sbjct: 166 TQLFCQNCVRFLADRYVEGECPRCGYDDARGDQCDKCGQLYDAVELVKPRCKLCSSPPVQ 225

Query: 174 DKLLSY-YESHPEFILPIERRNEV--------------ISFVKSGLKDLSLSRKTFDWGI 218
                          L  +   E                S+ K GLK  SL+R    WG+
Sbjct: 226 KDSRHMFIRIDELQPLTEKWAREQAQKGGWSSNGKLITESWFKEGLKPFSLTRD-LKWGV 284

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAI 273
            +P       ++YVW DA   Y + T    +      K  P ++     +GKD +RFH +
Sbjct: 285 PVPIKGMEDKVLYVWFDAPIGYPSITANYTDDWQKWWKN-PDNVKLYQFMGKDNVRFHTV 343

Query: 274 YWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLV 330
            +P+ L+ +  P      + +  ++ ++G K SKS    +   +  +  +     RY+L+
Sbjct: 344 IFPSCLIGSKDPYTLLHHINTTEYLQYEGGKFSKSRNIGVFGDKARDLGLSASVWRYYLL 403

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--- 387
                  D  +       R N++L   +GN  +R ++  +K YD ++P   A +E     
Sbjct: 404 ANRPETADSQFAWRDFIARNNSELLANLGNFCNRVLTF-MKKYDYVLPAIPADSELHSYK 462

Query: 388 ---------------ESILSVC----SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                           S++S      + +L +    M+   I   L  +++L +  + + 
Sbjct: 463 QGAVAAAADGADDASSSVISRFARDVNAILGQYISAMEAVKIRSGLQHMMALSARGNVFL 522

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
                   L   +  R   V+ V + +I  L+ L+  F+P+ ++ I   L          
Sbjct: 523 VESHFDNTLFTESRARCDEVMIVALNLIWLLSALIHPFMPETSDAILKQLDAPPRAVPED 582

Query: 488 S-LDQRLKPGFMLHK 501
           +     L PG  + K
Sbjct: 583 AQFYIDLLPGHKIGK 597


>gi|323348501|gb|EGA82746.1| Mes1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 751

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 109/546 (19%), Positives = 212/546 (38%), Gaps = 43/546 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      
Sbjct: 194 NERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETK 253

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +
Sbjct: 254 ALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEE 313

Query: 122 GCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEG 164
                 Y     +Y  D           Y  A G   +            NP   +++  
Sbjct: 314 QSMKQLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDAS 373

Query: 165 YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFD 215
              + S +    L   ES                   +    S++K GLK   ++R    
Sbjct: 374 PEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV- 432

Query: 216 WG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  + +      ++YVW DA   Y++ T              P  +     +GKD + F
Sbjct: 433 WGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNN-PEHVSLYQFMGKDNVPF 491

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +P   L           + +  ++ ++  K SKS G  +      +  +     RY
Sbjct: 492 HTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRY 551

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +L        D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   + 
Sbjct: 552 YLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSN 611

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
            D  ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++
Sbjct: 612 YDG-LVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKS 670

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + +I  ++ ++  ++P++  KI  +L               +  G  ++K  +
Sbjct: 671 DAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALKID-DRFHLAILEGHNINKA-E 728

Query: 505 PIFPRF 510
            +F R 
Sbjct: 729 YLFQRI 734


>gi|203288026|ref|YP_002223041.1| methionyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|226710895|sp|B5RPT6|SYM_BORRA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|201085246|gb|ACH94820.1| methionyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 726

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 116/539 (21%), Positives = 227/539 (42%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+ G++ L+  GTDE+G      A 
Sbjct: 2   QKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT K H +T + L+ K+   G I +  
Sbjct: 62  IEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKE 121

Query: 124 YSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFF--------- 167
              ++  +D+ +  D  V            G       N +   E               
Sbjct: 122 NEQFFCQQDQMFLADRYVTGECPNCGNNTKGDQCENCSNLLVTNELLNPRCIICKNIPII 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E  +    +N   +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNINAIKITNAFLRDGLKERTITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFHTIM 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVR 331
           +P+  L +        K+ S  ++ ++  K SKS G  I   +V   E+  D  R+++  
Sbjct: 301 FPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTEIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +  D   +R+N++L     NL++R ++   K +   I       E +E+  
Sbjct: 361 NRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDKI----ELNENFW 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + +   +      +   +  AL +++ +    ++ F  ++PW+ K + P     +L   
Sbjct: 417 QIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTTKELLLNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P  +++I      + E    + L   L  G    ++ + +F + 
Sbjct: 477 IYLIRDLSILISPFMPHTSDRIRSFFGKSYE-ISNKFLGTNL--GLTTIQSTEVLFTKL 532


>gi|3924|emb|CAA24627.1| tRNA synthetase [Saccharomyces cerevisiae]
 gi|151943538|gb|EDN61849.1| methionyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|323308896|gb|EGA62129.1| Mes1p [Saccharomyces cerevisiae FostersO]
          Length = 751

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/546 (19%), Positives = 212/546 (38%), Gaps = 43/546 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      
Sbjct: 194 NERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETK 253

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +
Sbjct: 254 ALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEE 313

Query: 122 GCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEG 164
                 Y     +Y  D           Y  A G   +            NP   +++  
Sbjct: 314 QSMKQLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDAS 373

Query: 165 YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFD 215
              + S +    L   ES                   +    S++K GLK   ++R    
Sbjct: 374 PEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV- 432

Query: 216 WG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  + +      ++YVW DA   Y++ T              P  +     +GKD + F
Sbjct: 433 WGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNN-PEHVSLYQFMGKDNVPF 491

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +P   L           + +  ++ ++  K SKS G  +      +  +     RY
Sbjct: 492 HTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRY 551

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +L        D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   + 
Sbjct: 552 YLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSN 611

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
            D  ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++
Sbjct: 612 YDG-LVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKS 670

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + +I  ++ ++  ++P++  KI  +L               +  G  ++K  +
Sbjct: 671 DAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALKID-DRFHLAILEGHNINKA-E 728

Query: 505 PIFPRF 510
            +F R 
Sbjct: 729 YLFQRI 734


>gi|295688954|ref|YP_003592647.1| methionyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430857|gb|ADG10029.1| methionyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 569

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 123/556 (22%), Positives = 224/556 (40%), Gaps = 56/556 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G + L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFQRARGHETLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A      +  +      D+     +S+D F R++  ++H   +   + + D G I +   
Sbjct: 63  ANQDVATYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP---------------------VQ 158
              YS+ D+ +  D        + G +    +   N                      ++
Sbjct: 123 QMVYSVDDKRFLPDRYVEGTCPHCGFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNIE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +   DK+ ++ +SH ++  P   R+     +  GL D  ++R    WGI
Sbjct: 183 VRDTRHLYLLQTKMADKIRAWVDSHADW--PQLARSIAYKHLDEGLIDRGITRD-LAWGI 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +  D          + YVW DA   Y+  T       PD    ++W  D        + 
Sbjct: 240 PVAKDGAPRPGFEDKVFYVWFDAPIEYIAATQEWAEASPDRDWKRWWRTDAGAEDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + +  ++   G K S S    +     ++ 
Sbjct: 300 FMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVFMDAALDI 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L      G D  +  +     VN DLA+ +GN V+R +      +DG++P 
Sbjct: 360 LPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTESKFDGVVPE 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +E + +  S  L ++ E M    I ++   + +L    + Y     PW   KT
Sbjct: 420 GGQPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEAAPWTAIKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-----QRLK 494
           + DRA+ ++   + +    A +   F+P  A KI +   + D    + S D      +L 
Sbjct: 480 DRDRAAVIVRTALNLAALYAKISAPFIPFAAEKISEAFGL-DFPAAWPSNDAAAELSKLA 538

Query: 495 PGFMLHKTFDPIFPRF 510
            G  +    + +F + 
Sbjct: 539 VGQAIT-VPEVLFKKI 553


>gi|203284492|ref|YP_002222232.1| methionyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|226710893|sp|B5RME0|SYM_BORDL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|201083935|gb|ACH93526.1| methionyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 726

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 116/539 (21%), Positives = 227/539 (42%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K  I+ A+ Y N  PH+G+  +++ AD  AR+ R+ G++ L+  GTDE+G      A 
Sbjct: 2   KKKNLITAALPYVNNIPHLGNLVQVLSADAFARYSRMMGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +   ++     + + +  +I +D F RTT K H +T + L+ K+   G I +  
Sbjct: 62  IEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKE 121

Query: 124 YSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFF--------- 167
              ++  +D+ +  D  V            G       N +   E               
Sbjct: 122 NEQFFCQQDKMFLADRYVTGECPNCGNNTKGDQCENCSNLLVTNELLNPRCIICKNIPII 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E  +    +N   +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNTNAIKITNAFLRDGLKERTITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFHTIM 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P+  L +        K+ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +  D   +R+N++L     NL++R ++   K +   I       E +E+  
Sbjct: 361 NRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDKI----ELNENFW 416

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + +   +      +   +  AL +++ +    ++ F  ++PW+ K + P     +L   
Sbjct: 417 QIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTTKELLLNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P  +++I      + E    + L   L  G    ++ + +F + 
Sbjct: 477 IYLIRDLSILISPFMPHTSDRIRSFFGKSYE-ISNKFLGTNL--GLTTIQSTEVLFTKI 532


>gi|16125727|ref|NP_420291.1| methionyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234484|ref|YP_002516920.1| methionyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|25009392|sp|Q9A884|SYM_CAUCR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782857|sp|B8H5U4|SYM_CAUCN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13422851|gb|AAK23459.1| methionyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220963656|gb|ACL95012.1| methionyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 569

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 123/555 (22%), Positives = 226/555 (40%), Gaps = 54/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G + L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++     +S+D F R++  ++H   +   + + D G I +   
Sbjct: 63  AGQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNP------------------VQ 158
              YS+ D+ +  D  V             G   +   N                   ++
Sbjct: 123 QMVYSVDDKRFLPDRYVEGTCPHCKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNIE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +  +   +  QDK+ ++ ++H ++  P   R+     +  GL D  ++R    WGI
Sbjct: 183 VRDTKHLYLLQTKMQDKIRAWVDAHADW--PPLARSIAYKHLDEGLIDRGITRD-LAWGI 239

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPAD--------LH 261
            +  D        + + YVW DA   Y+  T       PD    ++W  D        + 
Sbjct: 240 PVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + +  ++   G K S S    +     +E 
Sbjct: 300 FMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVFMDAALEI 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L      G D  +  +     VN DLA+ +GN V+R +      ++G++P 
Sbjct: 360 LPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESKFEGVVPA 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +E + +  S  L ++ E M    I ++   + +L    + Y     PW   KT
Sbjct: 420 GGEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEAAPWTAIKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + DRA+ ++   + +    A +   F+P  A KI D   + D    + S D + +   + 
Sbjct: 480 DRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGDAFGL-DFPASWPSNDAKAELNTLS 538

Query: 500 HKT----FDPIFPRF 510
                   + +F + 
Sbjct: 539 VGRPITVPEVLFKKI 553


>gi|6321704|ref|NP_011780.1| Mes1p [Saccharomyces cerevisiae S288c]
 gi|1711639|sp|P00958|SYMC_YEAST RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1323481|emb|CAA97293.1| MES1 [Saccharomyces cerevisiae]
 gi|1536956|emb|CAA69086.1| methionine--tRNA ligase [Saccharomyces cerevisiae]
 gi|190406732|gb|EDV09999.1| methionine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|259146765|emb|CAY80022.1| Mes1p [Saccharomyces cerevisiae EC1118]
 gi|285812454|tpg|DAA08354.1| TPA: Mes1p [Saccharomyces cerevisiae S288c]
          Length = 751

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/546 (19%), Positives = 212/546 (38%), Gaps = 43/546 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      
Sbjct: 194 NERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETK 253

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +
Sbjct: 254 ALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEE 313

Query: 122 GCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEG 164
                 Y     +Y  D           Y  A G   +            NP   +++  
Sbjct: 314 QSMKQLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDAS 373

Query: 165 YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFD 215
              + S +    L   ES                   +    S++K GLK   ++R    
Sbjct: 374 PEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV- 432

Query: 216 WG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  + +      ++YVW DA   Y++ T              P  +     +GKD + F
Sbjct: 433 WGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNN-PEHVSLYQFMGKDNVPF 491

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +P   L           + +  ++ ++  K SKS G  +      +  +     RY
Sbjct: 492 HTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRY 551

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +L        D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   + 
Sbjct: 552 YLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSN 611

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
            D  ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++
Sbjct: 612 YDG-LVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKS 670

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + +I  ++ ++  ++P++  KI  +L               +  G  ++K  +
Sbjct: 671 DAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALKID-DRFHLAILEGHNINKA-E 728

Query: 505 PIFPRF 510
            +F R 
Sbjct: 729 YLFQRI 734


>gi|305681838|ref|ZP_07404642.1| methionine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658311|gb|EFM47814.1| methionine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 630

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 149/543 (27%), Positives = 232/543 (42%), Gaps = 72/543 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 3   NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMTGANVLMVSGTDEHGTPLLVQADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+     D+ +R   +    L +SYD F RTT + H+   + L++ + D G + K   
Sbjct: 63  EGVSVTELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFRGLYDNGYMLKETT 122

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYFF 167
            G  S          Y        GADG   +   N            PV  +  E   F
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPKF 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP- 221
             + +    L          L   R +   + +K  L  LS  R        DWGI IP 
Sbjct: 183 VETEHFLLDLPALAEELTAWLQT-RNDWRPNVLKFSLNLLSDIRPRAMSRDIDWGIPIPV 241

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRF 270
               D+P   +YVW DA+  YL+ +    +   +    + +  D      + +GKD + F
Sbjct: 242 EGWEDNPGKKLYVWFDAVVGYLSASIEWAHRSGNPDAWRDFWTDPAATSYYFMGKDNITF 301

Query: 271 HAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WP                     L LP +V S  F+   G K S S G VI   + 
Sbjct: 302 HSQIWPGELLGYQGKGAKGGTLHRLGALNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKDF 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++E G D LRYF+       +D  +  D   +R+N +LANG GNLV+R VSM   ++   
Sbjct: 362 LKEFGPDPLRYFIAVAGPENQDTDFTWDEFVRRINNELANGWGNLVNRVVSMAANNFG-K 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +PTPG  TE+D+ IL +  +    + E +Q+    + +   + +V E + Y    +PW+L
Sbjct: 421 VPTPGELTEADQKILDLAEQAFDVVGEALQHSRFKQGITHAMHVVGEANAYVAEMQPWKL 480

Query: 437 KK----------TN-----------PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K          T+            DR +TVL+V ++V+     LL  ++P +A ++ +
Sbjct: 481 AKAIKTAKAGVETDSATNAADVAALEDRLATVLWVALQVVSDANTLLTPYIPNIAQQVHE 540

Query: 476 ILF 478
            L 
Sbjct: 541 TLG 543


>gi|320041417|gb|EFW23350.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 657

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/543 (21%), Positives = 221/543 (40%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++   G + 
Sbjct: 71  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
           +      +  + +++              Y  A G   +            NP   ++  
Sbjct: 131 EKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 191 TPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDILR 269
            WG+ +P +     ++YVW +A   Y + T    +      +  P D+     +GKD + 
Sbjct: 250 KWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDDWELWWRN-PEDVRLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L    N  +   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 309 FHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 369 YYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPDFTIPE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           S   +L   + +L++  E M+   +   L   + +    +    + K    L    P+RA
Sbjct: 429 SFNPVLDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKP-----GFM 498
           +TV+ +   +I   A +   ++P  +  I + L    +N    + L    KP     G  
Sbjct: 489 ATVVGIVTNLIHLCASVFSPYLPATSKSILEQLNAPFKNIPSLEDLKDGWKPTAIKAGHK 548

Query: 499 LHK 501
           + K
Sbjct: 549 IGK 551


>gi|256272650|gb|EEU07627.1| Mes1p [Saccharomyces cerevisiae JAY291]
          Length = 751

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/546 (19%), Positives = 211/546 (38%), Gaps = 43/546 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      
Sbjct: 194 NERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETK 253

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +
Sbjct: 254 ALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEE 313

Query: 122 GCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEG 164
                 Y     +Y  D           Y  A G   +            NP   +++  
Sbjct: 314 QSMKQLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDAS 373

Query: 165 YFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFD 215
              + S +    L   ES                   +    S++K GLK   ++R    
Sbjct: 374 PEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLV- 432

Query: 216 WG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           WG  + +      ++YVW DA   Y++ T              P  +     +GKD + F
Sbjct: 433 WGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNN-PEHVSLYQFMGKDNVPF 491

Query: 271 HAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           H + +P   L           + +  ++ ++  K SKS G  +      +  +     RY
Sbjct: 492 HTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRY 551

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +L        D  +  D    R N++L   +GN V+R +  +   Y+G++P   P   + 
Sbjct: 552 YLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSN 611

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
            D  ++   + +L    + M+     R L   +SL +  +++    K    L   +P+++
Sbjct: 612 YDG-LVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKS 670

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+ V + +I  ++ ++  ++P++  KI  +L               +  G  + K  +
Sbjct: 671 DAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALKID-DRFHLAILEGHNISKA-E 728

Query: 505 PIFPRF 510
            +F R 
Sbjct: 729 YLFQRI 734


>gi|284998042|ref|YP_003419809.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5]
 gi|284445937|gb|ADB87439.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5]
          Length = 585

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 132/546 (24%), Positives = 242/546 (44%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 14  KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    + +
Sbjct: 74  IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 133

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYF 166
                    +             Y   E  +G                NP   +  +   
Sbjct: 134 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 193

Query: 167 FRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           F+ S +    LS +             +P   ++  + +V  GLK  S++R    WGI  
Sbjct: 194 FKKSKHWFFDLSEFNEKIRSWISSSNEMPDNVKSVALGWVSEGLKPRSITRDN-KWGIPA 252

Query: 221 PD--DPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADL---HVIGKDILRFH 271
           P        +YVW +AL  Y++               K  ++  D+   + IGKD + FH
Sbjct: 253 PFIGAEDKSIYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKDNIPFH 312

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +  PA L+++     LP  + +  ++L++G+K SKS    +   E  E + V+  R+ L
Sbjct: 313 VVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWIDEAPELMDVEYWRFVL 372

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P     A  ++D
Sbjct: 373 IRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRSDALDDND 432

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RAST 446
           + I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K   +   + 
Sbjct: 433 KKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAGKEVELNN 492

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR-LKPGFMLHKTFD 504
            LY+ V  ++ +AILL   +P  A +I+D+L + + EN  +    +  +  G  + K   
Sbjct: 493 TLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGNIENEKWDIASKLSINYGHKIGK-VK 551

Query: 505 PIFPRF 510
            +F + 
Sbjct: 552 VLFKKL 557


>gi|225023038|ref|ZP_03712230.1| hypothetical protein CORMATOL_03086 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944261|gb|EEG25470.1| hypothetical protein CORMATOL_03086 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 633

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 150/546 (27%), Positives = 229/546 (41%), Gaps = 75/546 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + ++ A  Y N   HIGH     + +DV AR+ R+ G +VL  +GTDEHG  +   A  
Sbjct: 3   NVLVNVAWPYANGPRHIGHVAGFGVPSDVFARYQRMTGANVLMVSGTDEHGTPLLVQADK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV+     D+ +R   +    L +SYD F RTT + H+   + L++ + D G + K   
Sbjct: 63  EGVSVTELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAIVQELFRGLYDNGYMLKETT 122

Query: 125 SGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYFF 167
            G  S          Y        GADG   +   N            PV  +  E   F
Sbjct: 123 MGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPADLINPVSKINGETPKF 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-----FDWGIKIP- 221
             + +    L          L   R +   + +K  L  LS  R        DWGI IP 
Sbjct: 183 VETEHFLLDLPALAEELTAWLQT-RNDWRPNVLKFSLNLLSDIRPRAMSRDIDWGIPIPV 241

Query: 222 ----DDPQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRF 270
               D+P   +YVW DA+  Y        Y      +   FW        + +GKD + F
Sbjct: 242 EGWEDNPGKKLYVWFDAVVGYLSASIEWAYHSGNPDAWRDFWTDPAATSYYFMGKDNITF 301

Query: 271 HAIYWPAF--------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           H+  WP                     L LP +V S  F+   G K S S G VI   + 
Sbjct: 302 HSQIWPGELLGYQGKGAKGGTLHRLGELNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKDF 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++E G D LRYF+       +D  +  D   +R+N +LANG GNLV+R VSM   +++  
Sbjct: 362 LKEFGPDPLRYFIAVAGPENQDTDFTWDEFVRRINNELANGWGNLVNRVVSMAANNFE-K 420

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +PTPG  TE+D+ IL +  +    + E +Q+    + +   + +V E + Y    +PW+L
Sbjct: 421 VPTPGELTEADQKILDLAEQAFDVVGEALQHSRFKQGITHAMHVVGEANAYVAEMQPWKL 480

Query: 437 KK-----------------TN-------PDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            K                 T+        DR +TVL+V ++V+     LL  ++P +A +
Sbjct: 481 AKAIKTAKAGAAGAGADSATDAADVAALEDRLATVLWVALQVVSDANTLLTPYIPNIAQQ 540

Query: 473 IFDILF 478
           + + L 
Sbjct: 541 VHETLG 546


>gi|149174947|ref|ZP_01853571.1| methionyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148846284|gb|EDL60623.1| methionyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 681

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/540 (22%), Positives = 217/540 (40%), Gaps = 42/540 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + ++ ++ A+ Y N   HIGH  E I  D+  RF +L G    F    D HG  I   A
Sbjct: 2   TQRRILVTAALPYANGDIHIGHLVEYIQTDIWVRFQKLRGHACRFFCADDTHGTAIMIRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  G + +  +    +         +I +D++  T  +++   C  +W+ +     + + 
Sbjct: 62  RQEGRSEEALIADVQQKHITDFAGFNIEFDNYGSTNSEQNRKLCYEIWEALRTADLVVEK 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
             +  + +++  +  D  V             G +     + + P    +        + 
Sbjct: 122 EVTQLFDVQENTFLADRFVKGTCPKCKAPDQYGDNCDKCGSTYTPADLADPISTLSNTTP 181

Query: 172 ---YQDKLLSYYESHPEFILPIERRNEVISFVKSG----------LKDLSLSRKTFDWGI 218
                  L    E    F++   +  E +    +           L+D  +SR    +G 
Sbjct: 182 ELRTASHLFVRIEDLHGFLVEWTQSGEHLQSEVANYLKGHFLGDPLRDWDISRPAPYFGF 241

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAI 273
           +IPD P    YVW DA   Y+ +T       G     W  +      H IGKDI  FH +
Sbjct: 242 EIPDSPGNYWYVWFDAPIGYIASTLEWCEKHGEDFDQWWKNPETEVHHFIGKDITYFHTL 301

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +WPA L +A   LP+KV  HGF+   GEK+SKS G  +     +  +    LRY+   ++
Sbjct: 302 FWPAMLKTAGFNLPEKVHIHGFLTVDGEKMSKSKGTFVKAATYLNHLDPACLRYYYASKL 361

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D   + D   ++VN+DL   + NL SRS   + K          A    D  + +
Sbjct: 362 GPRLDDLDLNLDEFIQKVNSDLVGKVVNLASRSAKFVAK------TGLSAAYPEDGGLFA 415

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYV 450
             +     I    +    + A+ ++++L    ++++D +KPWE+KK          +  +
Sbjct: 416 HAASRSDAIAAAYEACDYNGAMREILALADRANKFWDDKKPWEVKKDGSRQAELQDICTI 475

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++ + +Q+ I L   +P+L+ +   +L   D    +      L  G  ++K F  +F R 
Sbjct: 476 SLNLYQQIVIYLTPVLPQLSEQTGALLN--DPIVNWDQAQTPL-AGTAVNK-FQHMFKRI 531


>gi|302417150|ref|XP_003006406.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354008|gb|EEY16436.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 679

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 117/571 (20%), Positives = 224/571 (39%), Gaps = 71/571 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + +++A+ Y N  PH+G+    ++ ADV ARF R  G   +F  G+DE+G    
Sbjct: 10  VKGKNNVLVTSALPYVNNTPHLGNVIGSVLSADVFARFSRARGNPTIFICGSDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GV  +    +     + + +  ++S+D F RT  ++  +  + +++K+   G I
Sbjct: 70  TKALEEGVDPETLCRKYHAVHKGIYEWFNLSFDIFGRTPTEQQTEIVQDIFRKLWQNGYI 129

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEE------GY 165
            +   +  +     ++  D  V        Y  A G   +   N +  +E E        
Sbjct: 130 EERETTQPFCPVHHSFLADRFVEGECSLCGYNDARGDQCDKCGNLLDPLEPEPEAGNAKP 189

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--------------------------- 198
              ++A     L       +   P +++ + +                            
Sbjct: 190 DDDIAAKATGWLINPRCKLDGAKPDKKQTKHLFLRLDALKEPLIDWFKKASTEGAWSTSA 249

Query: 199 ------FVKSGLKDLSLSRKTFDWGIKIPDDPQ------YIMYVWIDALTNYLTTTGYLD 246
                 ++  GLK   ++R    WG+ +P D         + YVW DA   Y++ T    
Sbjct: 250 QTITQAWIDKGLKPRGITRD-LKWGVPVPTDVTGEDYAAKVFYVWFDACIGYVSITKNYT 308

Query: 247 NPDG---SKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGF 295
           +       K + W  +         +GKD ++FH+  +PA  L  N    K  K+ +  +
Sbjct: 309 DGADLAGKKWEQWWKNPDEVKLYQFLGKDNVQFHSTVFPASQLGTNENWTKVHKISATEY 368

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + ++G K SKS G  +   +V E  V  D  RY+L+       D  +    L    N +L
Sbjct: 369 LNYEGGKFSKSRGVGVFGNQVQETGVPSDVWRYYLLSRRPETSDSEFMWQELVDGNNNEL 428

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHR 412
              +GN   R +       D  +P    F  +D  ++ +   +  L+E   NM+      
Sbjct: 429 LKNLGNFCQRVIKFAQAKLDTTVPDYTKFGLNDYLKNHVKEVNVNLKEYIANMEGTKFRD 488

Query: 413 ALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            L  ++S+ +  ++     K   +L    PDR + ++ + +  I  +A +L  ++P  + 
Sbjct: 489 GLRSILSISALGNKLLQDNKLDNKLLTEEPDRCAAIIGLALNQIALIASILNPYMPVTSK 548

Query: 472 KIFDILFVADENRCF-QSLDQRLKPGFMLHK 501
            IF+ L V        + +   +KPG  L +
Sbjct: 549 AIFEQLGVEPTPTIPDEWVTGAIKPGQKLGE 579


>gi|307128536|ref|YP_003880566.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482998|gb|ADM89868.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 549

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 123/506 (24%), Positives = 231/506 (45%), Gaps = 39/506 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK +++  ++ A+ Y N   HIGH     + AD+  R+ + +G  V+F +GTDEHG  I 
Sbjct: 1   MKNKKRYTVTAALPYANGPIHIGHLSGVYLPADIFVRYLKYNGKKVIFISGTDEHGVPIT 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+TTK  VD+     +     + I +D+F RTT K H+ T    +KK+  K   
Sbjct: 61  IKAKEEGLTTKKIVDKYHILIKKSLKKIGILFDNFSRTTSKIHYKTSISFFKKLYKKKKF 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE------ 162
            +     +Y  +   +  D  +             G   +      +P + ++       
Sbjct: 121 IERETEQYYDNKVNQFLPDRYILGICPKCNYNIAYGDQCEKCGFSISPEELIKPYSYFTG 180

Query: 163 --------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                   + ++  L+ YQ+ L    ++   F        ++ S++  GLK  +++R   
Sbjct: 181 VKPILKKTKHWYLPLNKYQNFLEKCIKNKKHFKK--NVYGQIKSWLNEGLKPRAITRD-L 237

Query: 215 DWGIKIP--DDPQYIMYVWIDALTNYL---TTTGYLDNPDGSKAKFWPAD--LHVIGKDI 267
           +WGI IP  ++   ++YVW +A   Y+       +    +  K   +P    ++ IGKD 
Sbjct: 238 NWGIPIPIPNNLGKVLYVWFEAPIGYISSTIEWSFKKGKNWEKYWKYPNTAIINFIGKDN 297

Query: 268 LRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA-- 324
           + FH I +P    +  N  LP  V ++ F+  + +KIS S    +   E +E+       
Sbjct: 298 IIFHCIIFPIMLKIHGNYILPDNVPANEFLNIENKKISTSKKWAVWLHEYLEDFTNKEDV 357

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LRY L+  +   KD  +     K++ N++L + +GN V+R V +  + ++G +P P   +
Sbjct: 358 LRYVLISNMPETKDTNFSWKDFKQKNNSELVSILGNFVNRVVVLTKRYFNGKVPYPDKLS 417

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           + D SIL    +   +I   ++      AL + ++L    ++Y   ++PW+  + N  R 
Sbjct: 418 KKDLSILDNIKKSPLKIGFFIEKYNFKYALLKFMNLARLGNKYLTLEEPWKKFQLNKKRV 477

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLA 470
            T++Y++ ++I  L  L   F+P  +
Sbjct: 478 KTIIYISFQIIGALGYLSNPFLPFTS 503


>gi|323474905|gb|ADX85511.1| methionyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477646|gb|ADX82884.1| methionyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 573

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 132/546 (24%), Positives = 242/546 (44%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 2   KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    + +
Sbjct: 62  IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 121

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYF 166
                    +             Y   E  +G                NP   +  +   
Sbjct: 122 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 181

Query: 167 FRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           F+ S +    LS +             +P   ++  + +V  GLK  S++R    WGI  
Sbjct: 182 FKKSKHWFFDLSEFNEKIRSWISSSNEMPDNVKSVALGWVSEGLKPRSITRDN-KWGIPA 240

Query: 221 PD--DPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADL---HVIGKDILRFH 271
           P        +YVW +AL  Y++               K  ++  D+   + IGKD + FH
Sbjct: 241 PFIGAEDKSIYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKDNIPFH 300

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +  PA L+++     LP  + +  ++L++G+K SKS    +   E  E + V+  R+ L
Sbjct: 301 VVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWIDEAPELMDVEYWRFVL 360

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P     A  ++D
Sbjct: 361 IRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRSDALDDND 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RAST 446
           + I+S+ + + + + +  +   +     +++  V E + Y + + PW+L K   +   + 
Sbjct: 421 KKIISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAGKEVELNN 480

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR-LKPGFMLHKTFD 504
            LY+ V  ++ +AILL   +P  A +I+D+L + + EN  +    +  +  G  + K   
Sbjct: 481 TLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGNIENEKWDIASKLSINYGHKIGK-VK 539

Query: 505 PIFPRF 510
            +F + 
Sbjct: 540 VLFKKL 545


>gi|119184836|ref|XP_001243278.1| hypothetical protein CIMG_07174 [Coccidioides immitis RS]
          Length = 657

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/543 (21%), Positives = 221/543 (40%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGQRNILVTSALPYVNNVPHLGNIVGSVLSADVFARYHKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT  ++H +  + ++K++   G + 
Sbjct: 71  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDFFGRTPTQKHTEISQSIFKRLYKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
           +      +  + +++              Y  A G   +            NP   ++  
Sbjct: 131 EKTAEQPFCEKHQSFLADRYVEGECPRCHYDDARGDQCDKCGSLLDPFDLINPRCKVDGA 190

Query: 164 GYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 191 TPVSRPTKHIHLLLDKLQPQIEDWVRPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDILR 269
            WG+ +P +     ++YVW +A   Y + T    +      +  P D+     +GKD + 
Sbjct: 250 KWGVPVPLEGYDNKVLYVWFEACIGYPSITANYTDDWELWWRN-PEDVRLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L    N  +   + +  ++ ++  K SKS G  +      +  +  D  R
Sbjct: 309 FHAVIFPGCQLGTKDNWTMLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 369 YYLLKNRPETGDTQFEWRSFIDANNGELLAKLGNLVNRVVKLIASPKAYSSVVPDFTIPE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           S   +L   + +L++  E M+   +   L   + +    +    + K    L    P+RA
Sbjct: 429 SFNPVLDDVTAILRQYIEEMEGVHLRAGLITAMRVAEAGNNLIQSNKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-CFQSLDQRLKP-----GFM 498
           +TV+ +   +I   A +   ++P  +  I + L    +N    + L    KP     G  
Sbjct: 489 ATVVGIVTNLIHLCASVFSPYLPATSKSILEQLNAPFKNIPSLEDLKDGWKPTAIKAGHK 548

Query: 499 LHK 501
           + K
Sbjct: 549 IGK 551


>gi|15789599|ref|NP_279423.1| methionyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235311|ref|YP_001688511.1| methionyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|25009397|sp|Q9HSA4|SYM_HALSA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10579953|gb|AAG18903.1| methionine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726377|emb|CAP13158.1| methionine--tRNA ligase [Halobacterium salinarum R1]
          Length = 689

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/538 (22%), Positives = 219/538 (40%), Gaps = 48/538 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + YP    HIGH    +  D  +R  R  G + +F +GTD HG  IA  A  AGV 
Sbjct: 14  VTCGLPYPTGDLHIGHLRTYVSGDAFSRALRKLGQETVFVSGTDMHGTPIAVQAIEAGVG 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY---- 124
                 +    + D  +   +++D +  T E+ + +  R       D   +Y+       
Sbjct: 74  PLDLGLERHEQYADTFEEFSVAFDTYGHTDEETNVELTREFVGAWEDNDHVYETEIQVAY 133

Query: 125 -------------SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV--------QWMEEE 163
                         G      E    D+                PV        ++ E  
Sbjct: 134 DPDADQWLPDRYVEGTCPYCGEHARGDECDEGCQRHLEPGEIEAPVSTITGNSAEYHERA 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F RLS +Q+ L  +             +N+   +++ GL+D  ++R   DWGI  P +
Sbjct: 194 HKFLRLSDFQEYLEGFINRMEGTN---NAKNQPREWIEGGLEDFCITRD-LDWGIDYPGE 249

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW---PAD-----LHVIGKDILRFHAI 273
                ++YVW+DA   Y+  T       G++   W     D     +HVIG+DI++ H +
Sbjct: 250 GGDDLVLYVWVDAPIEYVAATKQYSERVGTEEFDWASVWKDGDGEIIHVIGRDIIQHHTV 309

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVRE 332
           +WP+ L  A+   P+ V + GF+   G  +S S    I   E        D LRY+L   
Sbjct: 310 FWPSMLAGADYAEPRAVCATGFVNIDGRGLSTSKNRAIWAAEYLDAGFHPDLLRYYLATA 369

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +      +RVN +LA+ +GN   R++    +++DG   TP   + +D+ + +
Sbjct: 370 SGFERDVNFSWAEFAQRVNTELADAVGNFAYRALLFANRNFDG---TPQEVSLTDD-VET 425

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             ++ + +  + +    +  A  + ++L    + Y    +PW L   + + A+ V+   V
Sbjct: 426 EIAQAMDDYEDALNEYDLRTAGERAVALARFGNEYIQHNEPWNL---DSEAAAPVMRDCV 482

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           ++++ +A+LLQ F+P+    ++  L            D    P     +  + +F + 
Sbjct: 483 QLVKAVAVLLQPFLPEKTETLWAQLGEDGRVSDATIADCLQAPPAEFGEPAE-LFEKI 539


>gi|302023995|ref|ZP_07249206.1| methionyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 487

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 5/340 (1%)

Query: 176 LLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           ++ Y+ +HP+FI P  R NE++ +F++ GL+DL++SR +F WG+ +P +P++++YVWIDA
Sbjct: 1   MVEYFNAHPDFIQPDGRMNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDA 60

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           L NY T  GY      +  KFW   + H++GKDILRFH+IYWP  L+  ++ LP  +F+H
Sbjct: 61  LLNYATALGYGQEETINYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDLLFAH 120

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G+ + K  K+SKS GNV+ P  ++E  G+D LRY+L+R +  G DG +  +    R+N +
Sbjct: 121 GWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYE 180

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHR 412
           LAN +GNL++R+V+MI K + G +PT  A  T+ D  + +V +  L    + M+     R
Sbjct: 181 LANDLGNLLNRTVAMINKYFSGQVPTFVANVTDFDADLAAVVADNLASYHKYMEAVDYPR 240

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLA 470
           AL  V +++S  ++Y D   PW L K   DR   + V+      +R +A L+Q F+   +
Sbjct: 241 ALEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTS 300

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           N I + L +             L  G  +     PIFPR 
Sbjct: 301 NAIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRL 340


>gi|145605679|ref|XP_370452.2| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15]
 gi|145013476|gb|EDJ98117.1| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15]
          Length = 748

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 151/444 (34%), Positives = 238/444 (53%), Gaps = 22/444 (4%)

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           +T K   D NS  F D+A+   I  D FIRTT+  H +  +  W ++ D+G IY+  + G
Sbjct: 1   MTPKQLCDANSEVFLDLAEKAGIDNDFFIRTTDPDHKEAVQYFWDRLWDRGYIYEATHKG 60

Query: 127 WYSLRDEAYYNDDEVYKGADGQY------YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           WY + DE +Y +  + K  D              N V+WMEE+ Y FRL+A +D+LL ++
Sbjct: 61  WYCVSDETFYPESTIEKRKDPMTGEVFLASKETGNAVEWMEEKTYHFRLTALKDRLLKFF 120

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNY 238
           E +PE+I+P  R  EV+ +V++ L+DLS+SR T   DWGI++P+D    +YVWIDAL NY
Sbjct: 121 EENPEWIVPAPRMKEVVDWVENSLEDLSVSRPTSRLDWGIRVPNDESQTIYVWIDALVNY 180

Query: 239 LTTTGYLDNPDGSKAKF-WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T  GY      +  K  WPAD+H+IGKDI+RFH +YWPA L++ +LPLP+++ +H    
Sbjct: 181 VTKAGYPYWTPETVQKDGWPADIHIIGKDIVRFHCVYWPALLMALDLPLPRRILTHSHWT 240

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKSLGNV++P   ++  GV+ +RYFL+      +D  YD   L       L  G
Sbjct: 241 LGGKKMSKSLGNVVNPFLAMDRFGVEVIRYFLISNGRLLQDASYDNKILVDIYKRQLQGG 300

Query: 358 IGNLVSRSVSMILKDYDGM--------IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +GNL+ R +     +   +         PT         S      ++   + +      
Sbjct: 301 VGNLLGRVMRSKKWNVREIVERCSKEGRPTNSNVEPKYSSFEQRLFQLPGTVVDAFGELD 360

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIRQLAILLQA 464
              AL  +  + +E +++     PW +   N   A+     + +Y+  E +R + ILLQ 
Sbjct: 361 PGAALRSIADMATETNKFITDCAPWSVTNENDADAAELNVRSCIYLCAESLRIMGILLQP 420

Query: 465 FVPKLANKIFDILFVADENRCFQS 488
           FVP  ++++ D+L V + +R    
Sbjct: 421 FVPNKSSELLDMLGVKETHRDLSH 444


>gi|58697284|ref|ZP_00372656.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536361|gb|EAL59826.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 447

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 191/446 (42%), Positives = 265/446 (59%), Gaps = 44/446 (9%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           H      LW ++ ++G IY   YSGWYS+RDEA+Y + E+  G            VQW++
Sbjct: 1   HKKAVIALWNRLEERGQIYLDSYSGWYSVRDEAFYQESELIDGK-----APTGAEVQWIK 55

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE YFFRLS +QDKLL  Y++ P FI P  RRNEVISFV+SGL DLS+SR +F+WGIK+P
Sbjct: 56  EESYFFRLSNWQDKLLELYKNQPSFIFPESRRNEVISFVRSGLIDLSISRTSFNWGIKVP 115

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA----------------------- 258
            + ++++YVWIDALTNYLT+ G+         +FW                         
Sbjct: 116 GNDKHVIYVWIDALTNYLTSIGFPSTEGEEYKRFWAEPETQIPVSSTGMTPNQGKTQIPV 175

Query: 259 --------------DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                         ++HVIGKDILRFHA+YWPA LL+A+LPLPK++  HG+ L++GEKIS
Sbjct: 176 SSTGMTPNLADNSFNVHVIGKDILRFHAVYWPAILLAADLPLPKQIAVHGWWLNEGEKIS 235

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNVIDPI + +E GVD LRYFL+RE + G+DG + K  +  R+N++LAN IGNLV R
Sbjct: 236 KSLGNVIDPIGLAQEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQR 295

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++S + K   G++PT        E  L  C  +L ++  ++     +  +  +I++ SE 
Sbjct: 296 TISFLHKQCSGIVPTIDQILLKGEESLPGCKAILDQVMNHLSKYEFNHIILLIINISSEA 355

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           + Y D   PW L KT+ +R + V+Y  +E IR + ILLQ  VPK A  I + L +  E R
Sbjct: 356 NAYIDKSAPWTLSKTDRERVNLVIYKLLEYIRIIGILLQPIVPKSAEMILNQLQIPKEQR 415

Query: 485 CFQSL-DQRLKPGFMLHKTFDPIFPR 509
             +SL +  +  G  L K   P+F R
Sbjct: 416 DLKSLCNACVSLGITLPKP-TPVFLR 440


>gi|330945683|ref|XP_003306603.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1]
 gi|311315833|gb|EFQ85309.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1]
          Length = 637

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 114/543 (20%), Positives = 211/543 (38%), Gaps = 43/543 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G    
Sbjct: 11  VEGERNVLITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    V+ K   D+      ++    +IS+D F RT  ++  D  + ++ K+   G +
Sbjct: 71  TKAIEEKVSPKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGYL 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ---------- 158
            +   +  Y    +++  D  V            +G          +P++          
Sbjct: 131 EEQTTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDG 190

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E +  +  L   Q     +++    E            S++K GL+   ++R  
Sbjct: 191 ATPVPRETKHVYLCLDKLQPLEEEWFKKSSKEGNWSSNGVQITSSWLKEGLRPRGITRD- 249

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +      +MYVW DA   Y++ T      D  +    P  +     +GKD +
Sbjct: 250 LKWGTAVPLEGYEDKVMYVWFDACIGYVSITA-TYTEDWKQWWHNPEHVKLYQFMGKDNV 308

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   +           + +  ++ ++  K SKS    +      E  +  D  
Sbjct: 309 PFHTVVFPCSQIGTKDKWTMLNTISTTEYLNYEKGKFSKSRNIGVFGNNAKETGIPSDVW 368

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L+       D  ++ DG     N +L   +GN ++R +  +   K YD ++P    F
Sbjct: 369 RYYLLSHRPETGDTEFEWDGFIAANNNELLKNLGNFINRVIKFVNNAKIYDSVVPDYTKF 428

Query: 384 TESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
            +          + +L+     +++  I  ALA  + + S  +      K   +L    P
Sbjct: 429 DDPYFTEHRKKVNDLLKTYIAELEDVKIRAALATALHVSSLGNLLLQDNKLDNKLATEQP 488

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLH 500
           DR + V+ + +  I  LA L+Q F+P     I   L  A+      S + R L  G  + 
Sbjct: 489 DRCAAVVGLALSQIHLLASLIQPFMPDTTAAILSQLN-AEFLIIPDSWEARSLPVGHKIG 547

Query: 501 KTF 503
              
Sbjct: 548 TAG 550


>gi|255939616|ref|XP_002560577.1| Pc16g02040 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585200|emb|CAP92874.1| Pc16g02040 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 649

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/550 (20%), Positives = 220/550 (40%), Gaps = 50/550 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + +++A+ Y N  PH+G+    ++ ADV AR+H+  G   L+  GTDE+G      A 
Sbjct: 12  RNILVTSALPYVNNVPHLGNVVGSVLSADVFARYHKACGRRTLYICGTDEYGTATETKAL 71

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              ++ +    + ++  +D+ +  +I +D F RT  ++H D  + ++K++ + G + +  
Sbjct: 72  EEKMSPEDLCAKYNKIHQDVYEWFNIGFDHFGRTPTQKHTDISQSIFKRLHENGYLGERT 131

Query: 124 YSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF-------- 167
               +  +  ++              Y  A G   +   + +   +              
Sbjct: 132 AEQPFCEQHGSFLADRFVEGECPRCHYDDARGDQCDKCGHLLDPFDLINPRCKIDGAAPV 191

Query: 168 -RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            R + +   LL   +   E            P   R    S++K GLK   ++R    WG
Sbjct: 192 RRETKHIHILLDKLQPEIEKWAHPAIEKGNWPRNSRIITESWLKEGLKGRGITRD-LKWG 250

Query: 218 IKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHA 272
           + +P +     ++YVW +A   Y + T      D  K    P D+     +GKD + FH+
Sbjct: 251 VPVPLEGYENKVLYVWFEACIGYPSITA-NYTDDWEKWWRNPEDVQLWQFLGKDNVPFHS 309

Query: 273 IYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P   +           + +  ++ ++G K SKS G  +      E  V  D  RYFL
Sbjct: 310 VIFPGTQIGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGVGVFGTNARETGVPADVWRYFL 369

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           ++      D  ++        N +L   +GNLV+R + ++   Y  +IP      E+   
Sbjct: 370 LKNRPETGDTQFEWAPFVDSNNGELLAKLGNLVNRIIKLVTASYGSVIP-EFTVPETFNP 428

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVL 448
            L   +  L++  E+++   +   +   + +    +    A +    L    P+RA+ V+
Sbjct: 429 FLEEVTEHLRQYHEDLEGAHLRAGVQTAMRIAEAGNGLIQANRLDNALIANEPERAAAVV 488

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF--------VADENRCFQSLDQRLKPGFMLH 500
              + +I  L+ +   ++P  +  I + L         V +    ++     LK G  + 
Sbjct: 489 GTVLNLIHLLSSVFSPYMPATSKSILEQLNAPFLYLPSVEELQSGWK--PTSLKAGHKIG 546

Query: 501 KTFDPIFPRF 510
           K    +F R 
Sbjct: 547 KAAY-LFSRI 555


>gi|189196444|ref|XP_001934560.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980439|gb|EDU47065.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 637

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 114/543 (20%), Positives = 211/543 (38%), Gaps = 43/543 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G    
Sbjct: 11  VEGERNVLITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    V+ K   D+      ++    +IS+D F RT  ++  D  + ++ K+   G +
Sbjct: 71  TKAIEEKVSPKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGFL 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ---------- 158
            +   +  Y    +++  D  V            +G          +P++          
Sbjct: 131 EEQTTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDG 190

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E +  +  L   Q     +++    E            S++K GL+   ++R  
Sbjct: 191 ATPVPRETKHVYLCLDKLQPLEEEWFKKSSKEGNWSSNGVQITSSWLKEGLRPRGITRD- 249

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +      +MYVW DA   Y++ T      D  +    P  +     +GKD +
Sbjct: 250 LKWGTAVPLEGYEDKVMYVWFDACIGYVSITA-TYTEDWKQWWHNPEHVKLYQFMGKDNV 308

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   +           + +  ++ ++  K SKS    +      E  +  D  
Sbjct: 309 PFHTVVFPCSQIGTKDKWTMLNTISTTEYLNYEKGKFSKSRNIGVFGNNAKETGIPSDVW 368

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAF 383
           RY+L+       D  ++ DG     N +L   +GN ++R +  +   K YD ++P    F
Sbjct: 369 RYYLLSHRPETGDTEFEWDGFIAANNNELLKNLGNFINRVIKFVNNAKIYDSVVPDYTKF 428

Query: 384 TESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
            +          + +L+     +++  I  ALA  + + S  +      K   +L    P
Sbjct: 429 DDPYFTEHRKKVNDLLKTYIAELEDVKIRAALATALHVSSLGNLLLQDNKLDNKLATEQP 488

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLH 500
           DR + V+ + +  I  LA L+Q F+P     I   L  A+      S + R L  G  + 
Sbjct: 489 DRCAAVVGLALSQIHLLASLIQPFMPDTTAAILSQLN-AEFLIIPDSWEARSLPVGHKIG 547

Query: 501 KTF 503
              
Sbjct: 548 TAG 550


>gi|224532120|ref|ZP_03672752.1| methionyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511585|gb|EEF81991.1| methionyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 724

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H +  +  + K+   G I +  
Sbjct: 62  IEKTTPLELCNKYYEIHKSIYKWFNIDFDIFGRTTNKHHQEIVQNFFLKLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP+  +  +    +     
Sbjct: 122 TEQFFCNKDSIFLADRYVIGECPECQSIAKGDQCDNCSKLLNPIDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            K    Y                 +          N   SF++ GLK+ +++R    WGI
Sbjct: 182 KKTNHLYIDLPKIKTKLEKWIKNPNTSKNWNTNALNMTNSFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGYENKVFYVWFDAPIGYISITKNIVKNWKSWWKNNEQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +      +RVN +L +   NLV+R ++   K +  ++       +  + I 
Sbjct: 361 NRPEKSDFQFMWQDFMERVNTELIDNFSNLVNRVLTFQKKFFGDVVEPIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K + P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSFPQETKELILNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI   L     +  F +     K G    ++ + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQKFLG---NSYQFSTKILGTKSGIKKIESTEILFNKL 532


>gi|257389032|ref|YP_003178805.1| methionyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171339|gb|ACV49098.1| methionyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 708

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/528 (21%), Positives = 206/528 (39%), Gaps = 68/528 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    +  DV AR  R  G    F  G+D HG  I   A   GV 
Sbjct: 14  VTVGLPYANGDLHVGHLRGYVNGDVYARALRRVGQQTAFVCGSDMHGTPIVVNAGEEGVD 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + +  +    + +     ++ +D++  T +  + +  +   +   ++  +Y+      Y
Sbjct: 74  PEAYALEYHETYAETFPQFNVEFDNYGHTHDDTNQELTQEFVRSWVEQDHVYEKEIQVGY 133

Query: 129 SL-----------RDEAYYNDDEVYKGADGQYYNAQ--------------HNPVQWMEEE 163
                             Y  +        +                    NP ++   E
Sbjct: 134 DPEADQWLPDRLVEGTCPYCGERARGDECDEGCQRHLEPGEIEDPVSTRTGNPAEYRTRE 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F RL+ +Q+ L  +             +N+   +V+  L+DL ++R   DWG+  P D
Sbjct: 194 HKFLRLNDFQEYLQGFL---DRLDGTDNAQNQPREWVEGDLQDLCITRD-IDWGVDYPTD 249

Query: 224 PQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----------------- 259
                     ++YVW+DA   Y+ +T       G     W +                  
Sbjct: 250 ADDEETEEDLVLYVWVDAPIEYVASTKQYTERVGEDTYDWESVWKLGGEERHGTDWDDDW 309

Query: 260 -------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
                  +HVIG+DI++ HA++WPA L  A    P+ + + GF+   G  +S S    + 
Sbjct: 310 TDEAGEIVHVIGRDIIQHHAVFWPAMLRGAGYNEPRAILATGFVNIDGNSLSTSRNRAVW 369

Query: 313 PIEV-IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
             E        D  RY++V       D  +  D   +RVN +L   +GN + RS+    +
Sbjct: 370 ADEYLDAGFHPDLFRYYIVSGSGIETDVDFSWDRFAERVNGELVGNVGNFLYRSLLFAKR 429

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-ISLVSEVDRYFDA 430
           +Y G        TE  + +       ++   + + +  + RALA V + L    + Y   
Sbjct: 430 NYGGTPD-----TEISDDVRERIEDAIETFEDAVDDYEL-RALADVGVELADFGNEYIQR 483

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +PW L   +P+RA  V+   V++ + +A+LLQ  +P+ A +I+  L 
Sbjct: 484 NEPWNLVDDDPERAQQVIRDCVQLSKAVAVLLQPVLPEKAERIWGQLG 531


>gi|126725226|ref|ZP_01741069.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706390|gb|EBA05480.1| methionyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 572

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/557 (21%), Positives = 223/557 (40%), Gaps = 55/557 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++AI Y N   H+G+     + AD+ ARF R  G +V+F   TDEHG     AA  
Sbjct: 2   RVLITSAIPYINGIKHLGNLVGSQLPADLYARFMRARGHEVMFLCATDEHGTPAELAATK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     F  +       +A    +S+D F R++  ++ +  +    K+++   I +   
Sbjct: 62  AGKPVADFCAEMHEVQATIAKGFGMSFDHFGRSSSPQNRELTQYFAGKLAENDLIAEVTG 121

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  Y  D          G DG   +   N                       +
Sbjct: 122 KQVYSNADGRYLPDRYIEGTCPNCGYDGARGDQCENCTKQLDPTDLLEPRSAISGSTDLE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +    R S   D+L ++ +S  ++                GL+D  ++R   DWG+
Sbjct: 182 VRDTKHLHLRQSTMVDQLEAWIDSKKDWPTLTTSIARKWLRDGDGLQDRGITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDG----SKAKFWPAD-------- 259
            + +           + YVW DA   Y+         +G       ++W  D        
Sbjct: 241 PVKNGTEDWPGMEGKVFYVWFDAPIEYIACAAEWAEANGKSEADWQRWWRTDKGADDVKY 300

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +P  +L +N P      + S  F+ + G + S S G  I   + +
Sbjct: 301 VQFMGKDNVPFHTLSFPVTILGSNEPWKLVDYIKSFNFLNYDGGQFSTSKGRGIFMDQAL 360

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  R++L+       D  +  +  +  VN DLAN +GN +SR        +   +
Sbjct: 361 EILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLANVLGNFISRITKFCRSKFSEAV 420

Query: 378 PTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           P     A  +    + +  + +++E   +M+   + ++   + ++    + Y     PW 
Sbjct: 421 PAAPLDAIAQERAGLWASLAPLIKEYETHMEAMEVRKSANTLRAIWVVGNEYLQNTAPWT 480

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + KT+P+ A+ +++V++ +IR  A++   F+P  A ++ D +   D    +   +  L  
Sbjct: 481 VNKTDPEAAAAIVHVSLNLIRLFAVVSSPFIPHAAQQMMDDMHTDD--WSWPEDESALSA 538

Query: 496 GFMLHK--TFDPIFPRF 510
               H     + +F + 
Sbjct: 539 LSTDHAFTVPEVLFAKI 555


>gi|121702181|ref|XP_001269355.1| methionyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397498|gb|EAW07929.1| methionyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 651

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/553 (20%), Positives = 223/553 (40%), Gaps = 50/553 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD  AR+H+  G   L+  GTDE+G     
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADAFARYHKACGRQTLYICGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A    VT +    + ++  +++ +  +I +D F RT  K+H +  + ++K++ D G + 
Sbjct: 71  KALEEKVTPEELCAKYNKIHQEVYEWFEIGFDHFGRTPTKQHTEISQAIFKRLYDNGYLT 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWME----------- 161
           +      Y     ++              Y+ A G   +   + +   +           
Sbjct: 131 EKTAEQPYCETHGSFLADRYVEGECPRCHYEDARGDQCDKCGHLLDPFDLIKPRCKLDGA 190

Query: 162 ------EEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                  +     L   Q ++  +   +  E   P   R+   +++K GLKD  ++R   
Sbjct: 191 TPVRRPTKHIHLLLDKLQPEIEKWVLPAMEEGNWPKNSRDITKAWLKEGLKDRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P       ++YVW +A   Y + T    +      +  P ++     +GKD + 
Sbjct: 250 KWGVPVPLPGFENKVLYVWFEACIGYPSITANYTSEWEQWWRN-PEEVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   L           + +  ++ ++G K SKS G  +      +  V  D  R
Sbjct: 309 FHSVIFPGCELGTKDKWTMLHHLSTAEYLNYEGGKFSKSRGIGVFGNNAKQTGVPPDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L++      D  ++        N++L   +GNLV+R V ++   Y+ +IP      ES
Sbjct: 369 YYLLKNRPETGDTQFEWRAFVDCNNSELLAKLGNLVNRVVKLVAASYNSIIP-EFTVPES 427

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRAS 445
            +  L   +  L++  E M++  +   +   + L    +    A +    L    P+ A+
Sbjct: 428 FQPNLDEITSTLRQYIEEMEDVHLRAGVNTAMRLAEAGNGLIQANRLDNTLIANEPEHAA 487

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--------RLKPGF 497
            V+   + +I  L+ +   ++P  +  I + L          SLD          LK G 
Sbjct: 488 AVVGTVMNLIYLLSSVFAPYLPATSKSILEQLNAP--FAVIPSLDDIKDGWKPSALKGGH 545

Query: 498 MLHKTFDPIFPRF 510
            + K    +F R 
Sbjct: 546 KIGKA-KYLFSRI 557


>gi|294630424|ref|ZP_06708984.1| methionyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833757|gb|EFF92106.1| methionyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 571

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 124/555 (22%), Positives = 233/555 (41%), Gaps = 53/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    F  Q     + + D   +++D F R++ +++H+  + + +++   G I +   
Sbjct: 63  QGIPVAEFCAQAHDAQKAIYDGFSLAFDHFGRSSSRQNHEITQEIARELKANGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSNADGRFLPDRYIIGTCPHCGYDKARGDQCENCTRVLDPTDLIEPRSAISGSADLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S    ++ ++ +   +   P+   +    ++  GL D +++R   DWG+
Sbjct: 183 IRETKHLFLLQSTLAGEVEAWVDERAD-DWPVLASSIARKWLTEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD-----LHV 262
            +P D          + YVW DA   Y+ +T             ++ +W +D        
Sbjct: 241 PVPADTWPDLAAEGKVFYVWFDAPIEYIGSTKEWAELDPENRDWRSWWWESDADVRYTQF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           +GKD + FH++ +PA LL    P  K   + +  ++ + G K S S    +   + +E +
Sbjct: 301 MGKDNVPFHSVMFPATLLGTRAPWKKVDVIKAFNWLNYYGGKFSTSQHRGVFTHDALEIL 360

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYF++       D  +  +     VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 361 PADYWRYFMMANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPQG 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E++  + +  +R+L E  E M+     +A A + +L S  + Y + + PW   KT+
Sbjct: 421 GEPGEAEAKLGAEIARLLAEYEEQMEAIQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKP 495
            D A+  L   + +I   A++ + F+P  A  +     + D+   + S D+      +  
Sbjct: 481 KDGAALTLRTAMNLIHLYAVVSEPFIPTTAKAMRSAFALPDDTATWVSADEAKSLTAVPA 540

Query: 496 GFMLHKTFDPIFPRF 510
           G         +F + 
Sbjct: 541 GTPFTVPP-VLFAKL 554


>gi|302498134|ref|XP_003011065.1| hypothetical protein ARB_02587 [Arthroderma benhamiae CBS 112371]
 gi|291174613|gb|EFE30425.1| hypothetical protein ARB_02587 [Arthroderma benhamiae CBS 112371]
          Length = 650

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/543 (20%), Positives = 215/543 (39%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G     
Sbjct: 11  QGKRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + 
Sbjct: 71  KALEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   + +   +           
Sbjct: 131 EKTTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GL+   ++R   
Sbjct: 191 TPIRRKTKHIFLLLDKLQPEIENWVATAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T      +  K    P D+     +GKD + 
Sbjct: 250 KWGVPVPLDGFERKVLYVWFEACIGYPSITA-NYTSEWEKWWRNPEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V ++          P    +E
Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIPEFTVSE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
                L   + +L++    M+   +   +   + +    +    A K    L    P+RA
Sbjct: 429 PFYPALEEVTSLLRQYINEMEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD------ENRCFQSLDQRLKPGFM 498
           + V+ + V +I   + +   ++P  +  I D L          ++         +KPG  
Sbjct: 489 AAVVGIVVNLIHLCSSVFCPYLPATSASILDQLNAPAGLIPSLDDIKDGWKPTAIKPGHR 548

Query: 499 LHK 501
           + K
Sbjct: 549 VGK 551


>gi|13542051|ref|NP_111739.1| methionyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|25009385|sp|Q979B7|SYM_THEVO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14325482|dbj|BAB60386.1| tRNA synthetase Met [Thermoplasma volcanium GSS1]
          Length = 543

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 139/511 (27%), Positives = 241/511 (47%), Gaps = 43/511 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ ++ A+ Y N   H+GH A   + ADV  RF+RL G +VL+ +G+DE+G  I   A+ 
Sbjct: 5   KILVNCALPYANGPLHVGHIAGAYLGADVFVRFNRLIGNEVLYVSGSDEYGTPITVRAEK 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + +   D+      +    L I++D F+RTT   H    +  + K+ ++G I KG  
Sbjct: 65  EGKSPQEIADRYYAEHIETFKKLGINFDIFMRTTYPEHSSVAQEFFLKLLNEGVIEKGTM 124

Query: 125 SGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPV--------QW 159
              Y  +   +  D  +             G   +            NPV        ++
Sbjct: 125 IAPYCRKIGRFMPDRYIEGECPYCGYKKARGDQCDNCGRTLDPQELINPVCILSGETPEF 184

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            E E +F RL  ++++L  + ++   +           +F++ GLK  +++R   DWG+K
Sbjct: 185 RETEHFFLRLDLFEERLEEWLKTKTFWK--PNVLAYTRNFIQGGLKKRAITRD-IDWGVK 241

Query: 220 IPDD--PQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADL---HVIGKDILRF 270
           +P +      +YVW +AL  Y+      +  +  P+  K  ++  D+   + IGKD + F
Sbjct: 242 VPLEGYEHKRIYVWFEALIGYITGAKMFSEVIGKPNYWKEFYFDKDVKNYYFIGKDNIPF 301

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H+I WPA LL    L LP  + ++ ++  KGE+ SKS G      E++  +  D LRY++
Sbjct: 302 HSIIWPAMLLGYGELNLPYDIPANEYLTFKGEQFSKSRGIGYTVDELLRVIPPDYLRYYV 361

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
              +    D  +  + L K VN+DL +  GN V R++S I K YD  I  P +  +    
Sbjct: 362 ASILPETGDSDFSLEELVKTVNSDLIDKYGNFVHRTLSFINK-YDLKITKPNSLND---E 417

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                    +E  + +    I R+LA  ++L    + YF+  +PW L KT+ D+ +  LY
Sbjct: 418 AFEYAQNAFKEYCDELSQVHIKRSLAIWLNLAIYANSYFNKSEPWNLIKTDRDQCNYKLY 477

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V++++ + L  ++  F P  A  I++ L V 
Sbjct: 478 VSLKLAQYLTAMIYPFTPTSAKAIWEQLGVN 508


>gi|297201071|ref|ZP_06918468.1| methionyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712144|gb|EDY56178.1| methionyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 571

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 127/555 (22%), Positives = 230/555 (41%), Gaps = 53/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G +VL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHEVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    F  Q     + + D   +++D F R++ +++ +  +   +++++ G I +   
Sbjct: 63  QGLPVAEFCAQAHDAQKAVYDGFALAFDYFGRSSSEQNVEITQHFARRLNENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  +  +H E   P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQHEVEEWVAAHEE-EWPQLAASIARKWLTEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLH-------V 262
            +P D          + YVW DA   Y+  T    + D      K W  D+         
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWADLDPENRDWKSWWYDVDTTVRYTEF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + KD + FH + +PA  L    P  K   V +  ++ + G K S S    +   + ++ +
Sbjct: 301 MAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDQALDIL 360

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 361 PADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKKRFGEEVPAG 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
           G   E++  +    +R+L E    M+     +A A + +L S  + Y + + PW   KT+
Sbjct: 421 GEPGEAEAKLGEEIARLLAEYESQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKP 495
            D A+  L   + +I   A++ + F+P  A  + +   +AD+   + + D+      L P
Sbjct: 481 KDGAALTLRTAMNLIHLYAVVSEPFIPATAKTMREAFALADDTATWVTADEARALTALTP 540

Query: 496 GFMLHKTFDPIFPRF 510
           G         +F + 
Sbjct: 541 GIAFTVPP-VLFAKL 554


>gi|302667056|ref|XP_003025122.1| hypothetical protein TRV_00701 [Trichophyton verrucosum HKI 0517]
 gi|291189205|gb|EFE44511.1| hypothetical protein TRV_00701 [Trichophyton verrucosum HKI 0517]
          Length = 650

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/543 (20%), Positives = 215/543 (39%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G     
Sbjct: 11  QGKRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + 
Sbjct: 71  KALEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   + +   +           
Sbjct: 131 EKTTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GL+   ++R   
Sbjct: 191 TPIRRKTKHIFLLLDKLQPDIENWAATAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T      +  K    P D+     +GKD + 
Sbjct: 250 KWGVPVPLDGFERKVLYVWFEACIGYPSITA-NYTSEWEKWWRNPEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V ++          P    +E
Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIPEFTVSE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
                L   + +L++    M+   +   +   + +    +    A K    L    P+RA
Sbjct: 429 PFYPALEEVTSLLRQYINEMEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD------ENRCFQSLDQRLKPGFM 498
           + V+ + V +I   + +   ++P  +  I D L          ++         +KPG  
Sbjct: 489 AAVVGIVVNLIHLCSSVFCPYLPATSASILDQLNAPAGLIPSLDDIKDGWKPTAIKPGHR 548

Query: 499 LHK 501
           + K
Sbjct: 549 VGK 551


>gi|327301905|ref|XP_003235645.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326462997|gb|EGD88450.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 650

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/545 (20%), Positives = 219/545 (40%), Gaps = 49/545 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G     
Sbjct: 11  QGKRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + 
Sbjct: 71  KALEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   + +   +           
Sbjct: 131 EKTTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GL+   ++R   
Sbjct: 191 TPIRRKTKHIFLLLDKLQPDIESWAATASEKGDWPKNSRVITGSWLKEGLQPRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
           +WG+ +P D   + ++YVW +A   Y + T      +  K    P ++     +GKD + 
Sbjct: 250 NWGVPVPLDGFERKVLYVWFEACIGYPSITA-NYTSEWEKWWRSPEEVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V ++          P    +E
Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIPEFTVSE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           +    L   S +L++    M+   +   +   + +    +    A K    L    P+RA
Sbjct: 429 AFYPALEEVSSLLRQYINEMEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------VADENRCFQSLDQRLKPG 496
           + V+ + V +I   + +   ++P  +  I D L         + D    ++     +KPG
Sbjct: 489 AAVVGIVVNLIHLCSSVFCPYLPATSASILDQLNAPAGLIPSLNDIKDGWK--PTAIKPG 546

Query: 497 FMLHK 501
             + K
Sbjct: 547 HRVGK 551


>gi|225678255|gb|EEH16539.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 653

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 119/547 (21%), Positives = 225/547 (41%), Gaps = 53/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   LF  GTDE+G    
Sbjct: 10  VKGQRNILITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLFVCGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +D+ +  +I +D F RT   +H    + ++K++ + G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQDVYEWFEIGFDIFGRTPTAQHTQISQNIFKRLHENGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF---- 167
            +      +  + +++  D  V        Y  A G   +   + +   + +        
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 168 -----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +   LL   +   E            P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRPTKHIHLLLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD +
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNV 304

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   +       K   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 305 PFHSVIFPGTQIGTRDKWTKLYHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIPPDVW 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFT 384
           RY+L++      D  ++        N +L   +GNLV+R V +I          P    T
Sbjct: 365 RYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPEFTVT 424

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E  E  L   + +L++    M++  +   L   + +V   +    A K    L  T P+R
Sbjct: 425 EPFEPALEEITALLRQYISEMESVHLRAGLVTAMKIVEVGNGLIQANKLDNSLIATEPER 484

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---------RLK 494
           A+TV+ + V +I  ++ +   ++P  +  I   L V    R   SLD+          +K
Sbjct: 485 AATVVGIVVNLIYLISSIFSPYLPATSASILAQLNVP--FRNIPSLDELKEVGWRADLIK 542

Query: 495 PGFMLHK 501
           PG  + K
Sbjct: 543 PGHKIGK 549


>gi|316976357|gb|EFV59666.1| tRNA synthetase class I family protein [Trichinella spiralis]
          Length = 988

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 160/520 (30%), Positives = 247/520 (47%), Gaps = 54/520 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD--VLFTTGTDEHGQKIAKAAQN 64
            +++  I Y N+ PH+GH Y  +IAD   R+ +L       LF++GTDEHG K+  AA  
Sbjct: 10  YFVTAPIYYANSGPHLGHLYSSLIADAAHRWFKLKNPHQLTLFSSGTDEHGSKVENAALK 69

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           A            +N  ++     I   DFIRT E RHH + +  W+ +     IYKG Y
Sbjct: 70  AE-----------KNVDELFSKFGIETTDFIRTVEARHHQSVQQFWEVLRKNNFIYKGKY 118

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSYYE-- 181
           SGWY   DE +YN+ ++              + V+W+ EE Y F+LS +  ++  + +  
Sbjct: 119 SGWYCSADECFYNESDLCDDETKSCKTTTAGHTVEWVVEENYLFKLSEFLPEIQHWLQTS 178

Query: 182 -SHPEFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
               + + P +    VI+ +K      +S  R+   WGI +PDD    +YVW DAL NYL
Sbjct: 179 GMSDDVVQPAQYLPFVINQLKQLSDVSISRDRQRLSWGIPVPDDCSQTIYVWFDALVNYL 238

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY           WP D H+IGKDIL+FHAI WPA LL+AN PLPK++F HG  L  
Sbjct: 239 TVAGYPGQLCR-----WPPDCHIIGKDILKFHAILWPAMLLAANFPLPKQIFCHGHWLSD 293

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNV+DP    +++  + LR+  +          Y        +N +LAN IG
Sbjct: 294 GVKMSKSLGNVVDPTLEAQKLTCEGLRFQKLLP-------DYSTPLAISVLNDELANSIG 346

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDE------------SILSVCSRVLQEIRENMQN 407
           NL++R+ S  +   D        FT+ DE             +++    +   + +    
Sbjct: 347 NLINRTTSSRVLRGDC-------FTDFDESVINGPSIRQGPDLMTDLDNLPSIVGQQYDK 399

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAF 465
                 +  ++++V + + +     PW L K         TVL++  + +R   ILL+  
Sbjct: 400 MQFSNGINSIVTVVKKANAFVQHFSPWHLAKDKNANSLLDTVLHLAHQTLRTCGILLKPV 459

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           VP +A+++ + L V+ +   +       K      K   P
Sbjct: 460 VPNIADEMLNRLSVSSDESNYSDCA---KAASKSRKAPQP 496


>gi|15217129|gb|AAK92522.1|AF401043_1 methyonyl-tRNA synthetase [Lactobacillus sakei]
          Length = 395

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/295 (37%), Positives = 175/295 (59%), Gaps = 4/295 (1%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +  +P++++YVW+DAL+NY+T  GY  + D    K+WPAD+H++GK+I+RFHAIYWP FL
Sbjct: 1   VTGNPKHVVYVWLDALSNYITALGYGSDDDQLFNKYWPADVHLVGKEIVRFHAIYWPIFL 60

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++  LPLPK++F HG++L K  K+SKS GNV+ P  ++E  G+DALRY+L+R I  G DG
Sbjct: 61  MALGLPLPKQIFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLMRAIPFGNDG 120

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVL 398
            +  +    R+N DLAN +GNL++R+V+MI K  DG +P+     T  D  + +  ++ +
Sbjct: 121 VFTPEDFVSRINYDLANDLGNLLNRTVAMINKYDDGHVPSYQADVTAFDADLQATATQTI 180

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIR 456
            +    M       AL  +  L+S  ++Y D  +PW L K +  +A   +VL    E +R
Sbjct: 181 AQYSTLMDQLKFSDALDTIWQLISRANKYIDETEPWVLAKDDSRKAELDSVLAHLAESLR 240

Query: 457 QLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +A+LLQ  +     ++F  L +  D+    + +  R      +     PIFPR 
Sbjct: 241 IVALLLQPVMTHAPREMFAQLGLDFDQEAQREMVYGRFPSDIKVIAKGTPIFPRL 295


>gi|319760594|ref|YP_004124532.1| methionyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039308|gb|ADV33858.1| methionyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 549

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 132/542 (24%), Positives = 232/542 (42%), Gaps = 42/542 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K+ ++ A+ Y N   HIGH  E I AD+  R+ R+    V F    D HG  I  
Sbjct: 1   MSNK-KILVTCALPYANNSLHIGHMLEHIQADIWVRYQRMQNNTVYFICADDAHGTAIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ   +  K+ +    +         +ISYD++  T  K + +    ++ K+ + G I 
Sbjct: 60  KAQQLNINPKIMISNIQKEHYKNCYDFNISYDNYHSTHSKENRELLYEIYLKLKNNGLIK 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRL 169
               S  Y  + + +  D  +             G + +   A + P++ ++ +      
Sbjct: 120 TRFISQLYDSKKKIFLPDRFIIGTCPKCHTSNQYGDNCEQCGAIYTPMELIDPKSVISGT 179

Query: 170 SAYQDKLLSYYESHPEFILPIERR-----------NEVISFVKSGLKDLSLSRKTFDWGI 218
           +    K   ++ + P F   ++             N++  + K GLK+  +SR +  +G 
Sbjct: 180 TPITKKSKHFFFNLPIFTKMLQHWVYSGVLQQEILNKIEEWFKLGLKEWDISRDSPYFGF 239

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFW-----PADLHVIGKDILRFH 271
           KIP+      YVW+DA   Y+ T   L   N +     FW         H IGKDI+ FH
Sbjct: 240 KIPNTGSKYFYVWMDATIGYMGTFKNLCKKNKNIFFEDFWDIHSKNELYHFIGKDIIYFH 299

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +++WPA L  +    P  +F HG +   G KISKS G  I     +  +  D LRY+   
Sbjct: 300 SLFWPAILEGSQFRKPTGIFVHGHVTLNGLKISKSKGAFIKANTYLSYLHSDYLRYYYAT 359

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++    D   + +    ++N+D+ N I NL +RS S I +  DG + +       D ++
Sbjct: 360 KLSSKINDIDLNFNDFFNKINSDIINKILNLAARSASFINQYNDGQLSSK----IEDPNL 415

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL-- 448
            +        I +  +N+    A+  ++SL  E ++Y D   PW +     +  + V   
Sbjct: 416 YNFFINFKHSIGKAFKNREFSEAMRSIMSLADEANKYIDQHSPWHIIHQIGEIKNAVSIA 475

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            + +++ R L   L+  +P L+    D L     +  + +LD  L     ++K F+ IF 
Sbjct: 476 SMGIQLFRILMTYLKPVLPILSKYSEDFLNT---HLLWNTLDTPL-INHKINK-FEIIFR 530

Query: 509 RF 510
           R 
Sbjct: 531 RI 532


>gi|227827837|ref|YP_002829617.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|259511562|sp|C3MW97|SYM_SULIM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|227459633|gb|ACP38319.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 573

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 131/546 (23%), Positives = 241/546 (44%), Gaps = 43/546 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAA 62
           K+ +++A  Y N+ PH+G+    I+ ADV AR+ RL     +VLF +G+DEHG  I   A
Sbjct: 2   KVLVTSAWPYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSGSDEHGTPIEIEA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMA-DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
               V  K   DQ     + +  +V  IS+D++ RT  + H    R    K++    + +
Sbjct: 62  IKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVKVSE 121

Query: 122 GCYSGWYSLR---------DEAYYNDDEVYKGADGQYYNAQ------HNPVQWMEEEGYF 166
                    +             Y   E  +G                NP   +  +   
Sbjct: 122 DEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGKAPI 181

Query: 167 FRLSAYQDKLLSYYESHPEFI------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           F+ S +    LS +             +P   ++  + +V  GLK  S++R    WGI  
Sbjct: 182 FKKSKHWFFDLSEFNEKIRSWISSSNEMPDNVKSVALGWVSEGLKPRSITRDN-KWGIPA 240

Query: 221 PD--DPQYIMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADL---HVIGKDILRFH 271
           P        +YVW +AL  Y++               K  ++  D+   + IGKD + FH
Sbjct: 241 PFIGAEDKSIYVWFEALLGYISAVIEYFEKKGEVEKWKEYWFSNDIKSYYFIGKDNIPFH 300

Query: 272 AIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            +  PA L+++     LP  + +  ++L++G+K SKS    +   E  E + V+  R+ L
Sbjct: 301 VVILPAMLMASGEEYHLPDVIAATEYLLYEGQKFSKSRKIGVWIDEAPELMDVEYWRFVL 360

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +R     KD  +      + VN +L + IGN V+R +SM+ + Y+G++P     A  ++D
Sbjct: 361 IRLRPEEKDTNFTWRETVRIVNTELNDDIGNYVNRILSMLNRYYNGIVPEFRSDALDDND 420

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RAST 446
           +  +S+ + + + + +  +   +     +++  V E + Y + + PW+L K   +   + 
Sbjct: 421 KKTISLINEIPKIVGDLFEKGKLKAGTEEMLRFVRECNAYLNLKAPWDLYKAGKEVELNN 480

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR-LKPGFMLHKTFD 504
            LY+ V  ++ +AILL   +P  A +I+D+L + + EN  +    +  +  G  + K   
Sbjct: 481 TLYIGVNSVKTIAILLYPLMPSHAQEIYDMLNMGNIENEKWDIASKLSINYGHKIGK-VK 539

Query: 505 PIFPRF 510
            +F + 
Sbjct: 540 VLFKKL 545


>gi|227876335|ref|ZP_03994448.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976089|ref|ZP_06183088.1| methionyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|227843108|gb|EEJ53304.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935682|gb|EEZ92217.1| methionyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 604

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 138/531 (25%), Positives = 227/531 (42%), Gaps = 52/531 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     I +DV +R+ R+ G +VL  +GTDEHG  I   A+  G+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEKEGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+ T R +++ + D G +          
Sbjct: 68  RQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQTVRAMFEVVRDNGYMLVQTTRAAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEG 164
                      +         E  +G        Q +P                ++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKFVETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PD 222
           YF  L A  + L  + +             +        +K  +++R   DWGI I   +
Sbjct: 188 YFLDLPALAEALTKWLDEREATGTWRPNVIKFSKNFLKEIKPRAMTRD-IDWGIPIPGWE 246

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPA----DLHVIGKDILRFHAIYW 275
           D    +YVW DA+  YL+ +       G      K+W +      + +GKD + FH+  W
Sbjct: 247 DQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNIVFHSQIW 306

Query: 276 PAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA LL                +L LP +V S  F+  +G+K + S G VI   +++E   
Sbjct: 307 PAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVRDMLERYQ 366

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           VDALRYF+       +D  +      +R N +L    GNLV+R+ +MI K +  + P  G
Sbjct: 367 VDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRFGEIPPA-G 425

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTN 440
                D+ +L + +     +   ++      AL +V+ LV E +RY    +P++LK ++ 
Sbjct: 426 KLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPFKLKDESQ 485

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +R  T+L+V  +V+  L  ++  F+P   N I  +L           +++
Sbjct: 486 RNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVLGGEGNIAPMPRIEE 536


>gi|307701515|ref|ZP_07638533.1| methionine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613307|gb|EFN92558.1| methionine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 604

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 138/531 (25%), Positives = 227/531 (42%), Gaps = 52/531 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     I +DV +R+ R+ G +VL  +GTDEHG  I   A+  G+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEKEGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+ T R +++ + D G +          
Sbjct: 68  RQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQTVRAMFEVVRDNGYMLVQTTRAAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEG 164
                      +         E  +G        Q +P                ++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKFVETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PD 222
           YF  L A  + L  + +             +        +K  +++R   DWGI I   +
Sbjct: 188 YFLDLPALAEALTKWLDEREATGTWRPNVIKFSKNFLKEIKPRAMTRD-IDWGIPIPGWE 246

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPA----DLHVIGKDILRFHAIYW 275
           D    +YVW DA+  YL+ +       G      K+W +      + +GKD + FH+  W
Sbjct: 247 DQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNIVFHSQIW 306

Query: 276 PAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA LL                +L LP +V S  F+  +G+K + S G VI   +++E   
Sbjct: 307 PAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVRDMLERYQ 366

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           VDALRYF+       +D  +      +R N +L    GNLV+R+ +MI K +  + P  G
Sbjct: 367 VDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRFGEIPPA-G 425

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTN 440
                D+ +L + +     +   ++      AL +V+ LV E +RY    +P++LK ++ 
Sbjct: 426 KLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPFKLKDESQ 485

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +R  T+L+V  +V+  L  ++  F+P   N I  +L           +++
Sbjct: 486 RNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVLGGEGNIAPMPRIEE 536


>gi|15594932|ref|NP_212721.1| methionyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915073|sp|Q44951|SYM_BORBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2688510|gb|AAB91520.1| methionyl-tRNA synthetase (metG) [Borrelia burgdorferi B31]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +Y  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFYCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|221218149|ref|ZP_03589615.1| methionyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223889005|ref|ZP_03623596.1| methionyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|225549495|ref|ZP_03770461.1| methionyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192097|gb|EEE18318.1| methionyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223885821|gb|EEF56920.1| methionyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|225369772|gb|EEG99219.1| methionyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +Y  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFYCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|226321893|ref|ZP_03797419.1| methionyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226233082|gb|EEH31835.1| methionyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|216264496|ref|ZP_03436488.1| methionyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980969|gb|EEC21776.1| methionyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +Y  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFYCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|224532738|ref|ZP_03673355.1| methionine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512356|gb|EEF82740.1| methionine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|284164098|ref|YP_003402377.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284013753|gb|ADB59704.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 705

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/540 (21%), Positives = 218/540 (40%), Gaps = 48/540 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    I AD  +R     G +  +  G+D HG  +A  A+  GV 
Sbjct: 16  VTCGLPYANGDLHIGHLRGYIGADAFSRALETLGQETAYVCGSDMHGTPVAVNAEQQGVD 75

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F       + +     ++ +D++  T ++ + +  + + + + ++G IY+      Y
Sbjct: 76  PEDFALDWHEQYEETFPQFNVEFDNYGHTHDETNTELTQEIVRTLDEEGYIYEKEIQVAY 135

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
               + Y  D  V            G   +                     NP ++ E  
Sbjct: 136 DPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHLEPGEVEDPTSTITGNPAEYRERT 195

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             FF +S + D L  +             RN+   +++ GL+D  ++R   DWGI  P  
Sbjct: 196 HKFFEVSEFADFLTEFL---DGLEGTSNARNQPRQWIEDGLQDWCITRD-MDWGIDYPTA 251

Query: 224 P-----QYIMYVWIDALTNY----LTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFH 271
                 + ++YVW+DA   Y       +  +   +    + W  D   +H+IG+DI++ H
Sbjct: 252 EGEDESELVLYVWVDAPIEYVASTKQYSERVGTDEFDWEQVWKGDGEIMHIIGRDIIQHH 311

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLV 330
            I+WPA L       P+ + + GFI   G+ +S S    I   E ++E    D LRY+L 
Sbjct: 312 TIFWPAMLEGVGYNKPRGIAATGFITINGKGLSTSRNRAIWAKEYLDEGFHPDLLRYYLT 371

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +  D  +++VN +L   +GN   RS+    ++Y+G        T+  E +
Sbjct: 372 TTGGLQQDVDFSWDAFQEKVNGELVGTVGNFWYRSLLFAYRNYEGTP-----ETDVSEEV 426

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                  + + RE++ +  +         L    + Y    +PW+L    P++A+ V+  
Sbjct: 427 RERIEGAIGDARESVNDYDLRGIGGAATELAQFGNEYIQRNEPWKLTDDEPEKAAQVIRD 486

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            V++ + + +L++   P  A  +++ L            D    P     +  + +F + 
Sbjct: 487 CVQIAKAVGVLIEPIAPDKAQNLWEQLGEDGAVADAHLEDALEAPPRNFDEPGE-LFAKI 545


>gi|224533669|ref|ZP_03674258.1| methionyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513342|gb|EEF83704.1| methionyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|225548701|ref|ZP_03769748.1| methionyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370731|gb|EEH00167.1| methionyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 734

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAISTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|167645711|ref|YP_001683374.1| methionyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083257|sp|B0T3J0|SYM_CAUSK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167348141|gb|ABZ70876.1| methionyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 569

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 121/556 (21%), Positives = 221/556 (39%), Gaps = 56/556 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G D L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGVKHLGNLAGSMLPADVYARFQRARGNDTLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      D+     +S+D F R++  ++H   +   + + ++G I +   
Sbjct: 63  AGQDVAEYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCEVLEERGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP---------------------VQ 158
              YS+ D  +  D        + G D    +   N                      ++
Sbjct: 123 QMVYSIDDARFLPDRYIEGTCPHCGFDKARGDQCDNCGNLLDPTELKDPYSVISGSRNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +   DK+ ++ +SHP++ L    ++     +  GL D  ++R    WGI
Sbjct: 183 VRDTRHLYLLQTKMADKIRAWIDSHPDWQL--LAKSIAYKHLDEGLIDRGITRD-LAWGI 239

Query: 219 KIPDDP-------QYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD--------LH 261
            +             + YVW DA   Y+  T    +         +W  D        + 
Sbjct: 240 PVTKGEFPRPGFEDKVFYVWFDAPIEYIAATQEWADEGAGRDWKSWWRTDEGADDVRYVQ 299

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P      + +  ++   G K S S    +     +E 
Sbjct: 300 FMGKDNVAFHTVSFPATILGSQEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVFMDAALEI 359

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R++L        D  +  +     VN DLA+ +GN V+R +      +DG+IP 
Sbjct: 360 LPPDFWRWYLTSNAPESSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTEGKFDGVIPD 419

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            GA    +E + +  S  L ++ E M    + ++   + +L    + Y     PW   KT
Sbjct: 420 GGAPGPLEEKLYADVSARLADLTEQMDAVEVRKSAQALRALWVVGNEYLQEAAPWTAIKT 479

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-----LK 494
           + DRA+ ++   + +    A +   F+P  A KI +   +      + + D       L 
Sbjct: 480 DRDRAAVIVRTALNLAALYARISAPFIPFAAEKIGEAFQLP-WPPVWPTTDAAAELSSLP 538

Query: 495 PGFMLHKTFDPIFPRF 510
            G  +    + +F + 
Sbjct: 539 VGLSVRAP-EVLFKKI 553


>gi|313217418|emb|CBY38518.1| unnamed protein product [Oikopleura dioica]
          Length = 568

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 160/502 (31%), Positives = 259/502 (51%), Gaps = 23/502 (4%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++  I Y  + PHIGH +  +I D   R+++++ +   F+ GTDEHGQKI ++A   G 
Sbjct: 43  FVTCPIYYATSSPHIGHIHSSVIGDFYHRWNKINDVASKFSLGTDEHGQKIIRSAAQQGY 102

Query: 68  -TTKVFVDQNSRNFRDMADVLDIS---YDD--FIRTTEKRHHDTCRILWKKISDKGDIYK 121
              ++ V+  S  +R       IS    DD  F+RTT   HH   + LW ++  KG I  
Sbjct: 103 DHPEILVNNISDLYRRTFKKFSISVASLDDAIFMRTTTSEHHQAAQKLWTRLRSKGFIKM 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWYS  DEA+    E+ +     +     + ++W+ EE Y F    + +++ S+  
Sbjct: 163 QNYEGWYSTPDEAFVGAKEIIEKDGKHFSAVNGHKLEWVSEENYIFEFEPFLNEIQSWIV 222

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
                       +E+    K+G   LS+SR      WG+ +P+D  + MYVW +AL NYL
Sbjct: 223 KAVAPDAAKILIDELKDRRKTGNMSLSISRPRNRVPWGVAVPNDANHTMYVWFEALINYL 282

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + + +  +FWP  L VIG DI RFH I+WPA LL+A LPLPKKVF HG     
Sbjct: 283 TAAGYGKHGNNAL-EFWPPQLQVIGIDIARFHCIFWPAMLLAAELPLPKKVFVHGHWTRD 341

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDA-LRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G K+SKSL N + P E++E VG  +    +   + A  K+  +  + L+ + +ADLAN I
Sbjct: 342 GMKMSKSLDNFVTPKELLELVGNQSDAVRWFCLKHATLKNVDFQDELLRIQSDADLANKI 401

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES-------DESILSVCSRVLQEIRENMQNQLIH 411
            NL+SR+ S   K+ +     P  F +S       ++ ++     + +     +    + 
Sbjct: 402 ANLLSRTTS---KNLNPSGAYPTLFPDSLLNAPDGEKYLIETVQELPELYASFVNAGQLP 458

Query: 412 RALAQVISLVSEVDRYFDAQKPWEL---KKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A+  VI  + E  ++   +K ++L    K+   +  + L+   E++R  AILLQ  +P+
Sbjct: 459 NAMNCVIRAIEEGLQFMTNEKIFKLDRDIKSERMKKDSALHACYELLRVSAILLQPAIPQ 518

Query: 469 LANKIFDILFVADENRCFQSLD 490
           +++KI + L +  ENR F+  +
Sbjct: 519 ISSKILNRLGIPLENRYFEDAE 540


>gi|312149641|gb|ADQ29712.1| methionyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 734

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSQENWTMLNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|306817226|ref|ZP_07450973.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304650028|gb|EFM47306.1| methionine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 604

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 137/531 (25%), Positives = 226/531 (42%), Gaps = 52/531 (9%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     I +DV +R+ R+ G +VL  +GTDEHG  I   A+  G+T 
Sbjct: 8   VAWPYANGPRHIGHVAGFGIPSDVFSRYMRMKGHEVLMVSGTDEHGTPILVEAEKEGLTP 67

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS---- 125
           +   D+N+R   +    L +SYD F RTT   H+   R +++ + D G +          
Sbjct: 68  RQLADKNNRLIVEDLVQLGLSYDLFTRTTTGNHYQIVRAMFEVVRDNGYMLVQTTRAAIS 127

Query: 126 -------GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--------------WMEEEG 164
                      +         E  +G        Q +P                ++E E 
Sbjct: 128 PSTGRTLPDRYIEGTCPICGAEGARGDQCDACGNQLDPTDLVKPRSKINGETPKFVETEH 187

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PD 222
           YF  L A  + L  + +             +        +K  +++R   DWGI I   +
Sbjct: 188 YFLDLPALAEALTKWLDEREATGTWRPNVIKFSKNFLKEIKPRAMTRD-IDWGIPIPGWE 246

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPA----DLHVIGKDILRFHAIYW 275
           D    +YVW DA+  YL+ +       G      K+W +      + +GKD + FH+  W
Sbjct: 247 DQPKRLYVWFDAVVGYLSASIEWARRSGDPEAWRKWWNSPEALSYYFMGKDNIVFHSQIW 306

Query: 276 PAFLLS--------------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           PA LL                +L LP +V S  F+  +G+K + S G VI   +++E   
Sbjct: 307 PAELLGYNGEGSRGGDPGNLGHLNLPTEVVSSEFLTMEGKKFATSKGIVIYVRDMLERYQ 366

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           VDALRYF+       +D  +      +R N +L    GNLV+R+ +MI K +  + P  G
Sbjct: 367 VDALRYFISAAGPENQDADFTWAEFVRRTNGELVAAWGNLVNRTAAMISKRFGEIPPA-G 425

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTN 440
                D+ +L + +     +   ++      AL +V+ LV E +RY    +P++LK ++ 
Sbjct: 426 KLEGIDQELLDMVATGFDTVGGLIEAHHQKAALGEVMRLVGEANRYVAQTEPFKLKDESQ 485

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +R  T+L+V  +V+  L  ++  F+P   N I  +L           +++
Sbjct: 486 RNRLGTILHVLAQVVTDLNCMMSPFLPTSCNTIDRVLGGEGNIAPMPRIEE 536


>gi|290992262|ref|XP_002678753.1| methionyl-tRNA synthetase [Naegleria gruberi]
 gi|284092367|gb|EFC46009.1| methionyl-tRNA synthetase [Naegleria gruberi]
          Length = 636

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 156/552 (28%), Positives = 267/552 (48%), Gaps = 58/552 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRL--DGLDVLFTTGTDEHGQKIAKAAQNA 65
            I+T I Y N  PHIGH +  I++D +  +H+   +  D++F+TGTDEHG K+ + A   
Sbjct: 70  LITTPIYYVNGPPHIGHLFTTILSDSIYLYHKQLKNRHDMIFSTGTDEHGSKVQRTAIKN 129

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKK 112
                         +   F ++ S  F+ M    +I Y  ++RT+  R H +T   +WK+
Sbjct: 130 LPNQNTLDDETINKSCVEFCEKISETFKTMMKDFNIQYTHYLRTSATREHRETVERVWKE 189

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-------QHNPVQWMEEEGY 165
           +  +GDIY G Y GWY   DEA+  D E  K  + +             N  +++ E+ Y
Sbjct: 190 LEKRGDIYLGEYQGWYCTTDEAFTTDIEQVKITNEKGEEELVTLSKASGNRCEFVTEKNY 249

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--------LKDLSLSRKTFDWG 217
            FRLS Y D++  + E +P  + P ER NE++  +K             +S +R    WG
Sbjct: 250 KFRLSKYMDRIQQWLEENPNTVKPKERYNELMELIKKEKERSPESLDLSISRTRDRVQWG 309

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I +PDD ++ +YVW+DALTNYLT          +++  WP  + +IGKDIL+FH IYWPA
Sbjct: 310 IPVPDDSEHTIYVWLDALTNYLTAGS----TLANESLNWPPTVQIIGKDILKFHGIYWPA 365

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA--LRYFLVREIAC 335
           FL++    LP+ +  H + L    K+SKSLGNV+ P +++ + GV+   LRY+L+ E   
Sbjct: 366 FLMALGKELPETILVHSYWLVNDVKMSKSLGNVVSPYDLLNQTGVEHDLLRYYLLSEAVL 425

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----------DYDGMIPTPGAFT 384
             D  +       +VN +LA+  GNL++R+ +                +D          
Sbjct: 426 SNDSSFSMVRFPVKVN-ELADIFGNLLTRAFNKKFHAEEGEIQYRNLQFDCPNAEQNPNQ 484

Query: 385 ESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKT---N 440
            + + ++ + + + +++R   + +  +  A      ++ + ++ FD  KPW L K    N
Sbjct: 485 TA-QELIELLNDLQEQVRNAYEERCEVRFANLAATKILKKCNQLFDEVKPWILVKDAVAN 543

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             +   ++++  E +R  +I L   +P    K+   L   +++          K G  + 
Sbjct: 544 AQQIEELMFLVAETLRNCSIALYPVLPH---KMNQSLSFFNQSTPLLEDIGFCKKGTSIR 600

Query: 501 KTFDP--IFPRF 510
              +P  +F + 
Sbjct: 601 VKSNPEILFKKI 612


>gi|312147894|gb|ADQ30553.1| methionyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 734

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +Y  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFYCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTMLNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|315057065|ref|XP_003177907.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339753|gb|EFQ98955.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 650

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/546 (20%), Positives = 222/546 (40%), Gaps = 51/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G     
Sbjct: 11  QGQRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++    +I +D F RT    H +  + ++K++ + G + 
Sbjct: 71  KALEEGVTPEELCSKYNKIHQEVYSWFNIGFDIFGRTPTTAHTEISQSIFKRLYEHGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   + +   +           
Sbjct: 131 EKTTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GL+   ++R   
Sbjct: 191 TPVRRQTKHIFLLLDKLQPEIEKWSATAIEKGDWPKNSRVITGSWLKEGLQPRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T     P+  K    P D+     +GKD + 
Sbjct: 250 KWGVPVPLDGFEKKVLYVWFEACIGYPSITA-NYTPEWEKWWRNPEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFT 384
           Y+L++      D  ++        N +L   +GNLV+R V ++   K Y+ +IP     T
Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYNSVIPD-FTVT 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E     L   + +L++    M+   +   +   + +    +    A K    L    P+R
Sbjct: 428 EPFYPALEEVTGLLRQYINEMEGVHLRAGILTAMKIAEAGNGLIQANKLDNSLIANEPER 487

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--------FVADENRCFQSLDQRLKP 495
           A+ V+ + V +I   + +   ++P  +  I + L         + D    ++     +KP
Sbjct: 488 AAAVVGIVVNLIHLCSSVFCPYLPATSASILEQLDAPAGLIPSLDDIKDGWK--PTVIKP 545

Query: 496 GFMLHK 501
           G  + K
Sbjct: 546 GHRVGK 551


>gi|295698760|ref|YP_003603415.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157378|gb|ADD79823.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 543

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/524 (22%), Positives = 226/524 (43%), Gaps = 41/524 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++ + ++ A  Y N   H+GH  E I AD+  R+ ++ G +VLF +  D HG  I   A
Sbjct: 2   KKKTILVTCAFPYSNGPIHLGHLLEHIQADIWVRYRKMKGEEVLFMSSDDSHGAAIMLKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            +  +     + +  +  ++      IS+D +  T +  + +  + ++  +  +G I K 
Sbjct: 62  IDLDMDPSKMIQKMHKEHKEDLLKFSISHDIYCSTNDLENKNITQKIYLILKKRGYIKKK 121

Query: 123 CYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHN--------------PV 157
             S  Y    + +  D  V             G + +     +N              P+
Sbjct: 122 IVSQLYDSEKKFFLPDRFVKGNCPNCLSPDQYGDNCEICGVVYNSTDLLHPRSILSQSPL 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +  + +  F  LS +Q KL  +    P        +N+ I ++  GLKD  +SR    +G
Sbjct: 182 KIKKTKHIFLILSKFQKKLFEWINCMP---FSQSVKNKSIEWISKGLKDWDISRDDPYFG 238

Query: 218 IKIPDDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
            KIP++ +   YVW+DA   Y+ ++         S  +FW  +      H IGKDI+ FH
Sbjct: 239 FKIPEEKRKYFYVWLDATIGYIASSRTLFKKRKISFQRFWKNNSEDLLFHFIGKDIIYFH 298

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++WP+ L       P  +F HG +   G+K+SKS GN I     ++    D LRY+   
Sbjct: 299 TLFWPSILEGIKYRKPNNIFVHGHLTVDGQKMSKSKGNFISANSYLKHFDSDYLRYYFAS 358

Query: 332 EIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +++   +D  ++      ++N +L N I NL SR+ S I K +        +    +  +
Sbjct: 359 KLSSKFEDVNFNLTDFSNKINKELINKIINLASRNASFIKKYF----CNYLSKKLDNMFL 414

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLY 449
                +  ++I ++  +   + A+ ++  L    ++Y +   PW++  K    +   +  
Sbjct: 415 YQKFIKESKKIEQSFISLNFNSAVKRICFLSDLANKYVEMCSPWKIDPKLENKKMHEICS 474

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             + + + L   L   +PK+A +  + L  +  +  + SL+  L
Sbjct: 475 TGINLFKILMTYLSPILPKIAERSSNFLNYS-FHHDWNSLNNPL 517


>gi|219684348|ref|ZP_03539292.1| methionyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672337|gb|EED29390.1| methionyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 724

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 227/539 (42%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + K+   G I +  
Sbjct: 62  IEKTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              ++  +D  +  D  V           KG   +  +   NP+  +  +          
Sbjct: 122 TEQFFCNKDSIFLADRYVIGECPECQSIAKGDQCEKCSKLLNPIDLINPKCIICKSKPVL 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E  +     ++  +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTNHLYIDLPKIKTKLEEWIKNSTASKNWNTNALKMTNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH + 
Sbjct: 241 PVPKKGYENKVFYVWFDAPIGYISITKNIVKNWESWWKNNEQVNLIQFIGKDNILFHTVI 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPCIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I+
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQII 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K ++P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKRIEFIEILFNKL 532


>gi|32491285|ref|NP_871539.1| methionyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont
           of Glossina brevipalpis]
 gi|68566006|sp|Q8D219|SYM_WIGBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|25166492|dbj|BAC24682.1| metG [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 550

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 130/539 (24%), Positives = 243/539 (45%), Gaps = 41/539 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M+ R+K+  + A  Y N   HIGH  E I AD+  RF+R+ G ++ F    D HG  I  
Sbjct: 1   MQNRKKILTTCAFPYANGSLHIGHILEHIQADIWVRFNRMIGNEIYFICADDSHGTPIMI 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+   ++ +  V    +  ++     +ISYD++  T  K ++  C++++K +  K  I+
Sbjct: 61  KAKKNKISPEKMVFLFYKEHKNDLSKFNISYDNYYLTHSKENYRFCKLIYKLLKRKKLIF 120

Query: 121 KGCYSGWYSLRDEAYYND-----------------DEVYKGADGQYYNAQHNPVQWMEEE 163
               S +Y  +   + +D                 D               NP+  + + 
Sbjct: 121 SKYISQFYDCKINMFLSDRLIQGKCPECNSEKQYSDNCNICGANYCSTDVINPISILSKS 180

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-----SFVKSGLKDLSLSRKTFDWGI 218
               + S +    L  +E   +  +      +        + K+GLK   +SR    +G 
Sbjct: 181 VPIIKKSKHLFFDLPKFEKFLKKWIHSGVLKKENLRKVSEWFKNGLKPWDISRDAPYFGF 240

Query: 219 KIPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFH 271
           KIP++ +   YVW+DA   Y                ++FW  +        IGKD++ FH
Sbjct: 241 KIPNEKEKYFYVWLDAPIGYLSTFKNLCDKKEKIFFSEFWDVNSKSEIYQFIGKDVIYFH 300

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL-V 330
           +++WPA L   NL  P K+F HG +   GEK+SKS G VI     ++    D LRY+  +
Sbjct: 301 SLFWPAILHGINLKKPTKLFVHGHVTLNGEKMSKSNGFVIKAKTYLKYCDSDFLRYYFSM 360

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +  +C KD  +       +VN+++ N I NL SRS S I K ++G +    ++   +  +
Sbjct: 361 KISSCAKDIDFSLSDFMNKVNSNIINKIVNLASRSSSFIDKYFEGYL----SYKIENYEL 416

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL---KKTNPDRASTV 447
               + + ++I +  Q+  I   + ++I L    ++YF+ + PW+L    K   ++   +
Sbjct: 417 YCKFTSLKEKINKYFQSNNISFIIYEIIKLAELANQYFNKKSPWKLTEESKDKRNKLHEI 476

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
             + + +   + I L+  +P L+ K  D L +   +  ++++++ L    +++K F P+
Sbjct: 477 SSMGINMFYIIMIYLKPILPNLSKKTEDFLNI---SLKWENINKPLLYPHLINK-FKPL 531


>gi|295674507|ref|XP_002797799.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226280449|gb|EEH36015.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 653

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 115/547 (21%), Positives = 225/547 (41%), Gaps = 53/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   LF  GTDE+G    
Sbjct: 10  VKGQRNILITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLFVCGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ + G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQSIFKRLHENGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF---- 167
            +      +  + +++  D  V        Y  A G   +   + +   + +        
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 168 -----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +   LL   +   E            P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRPTKHIHILLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD +
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNV 304

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   +       K   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 305 PFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIPPDVW 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFT 384
           RY+L++      D  ++        N +L   +GNLV+R V +I          P    T
Sbjct: 365 RYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPEFTVT 424

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E  +  L   + +L++    M++  +   L   + +V   +    A K    L    P+R
Sbjct: 425 EPFKPALEEITALLRQYISEMESVHLRAGLVTAMKIVEVGNGLIQANKLDNSLIANEPER 484

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ---------RLK 494
           A++V+ + V +I  ++ +   ++P  +  I   L V    R   SLD+          +K
Sbjct: 485 AASVVGIVVNLIYLISSIFSPYLPATSASILAQLNVP--FRNIPSLDELKEGGWRADLIK 542

Query: 495 PGFMLHK 501
           PG  + K
Sbjct: 543 PGHKIGK 549


>gi|195941720|ref|ZP_03087102.1| methionyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 734

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDLMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|182420091|ref|ZP_02951325.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669544|ref|ZP_04529524.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376128|gb|EDT73715.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237654988|gb|EEP52548.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 542

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 126/537 (23%), Positives = 229/537 (42%), Gaps = 45/537 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + I  A  Y N + H+G    ++  DVLAR+HRL G DV+F +G+D HG  +   A+  
Sbjct: 2   NVIIGNAWPYANGELHLGRIAVLLPGDVLARYHRLMGDDVVFVSGSDSHGTPVTMKAKAE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G++ +          ++  + L  S+D F +T  + H        K++ DKG IY+    
Sbjct: 62  GMSPEEASLHYHEKIKECFEGLGFSFDIFTKTHTEYHSKKVSEFIKELYDKGYIYEKEVE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWME 161
             Y  +   Y  D  +                                     +     E
Sbjct: 122 QTYCPKCNEYLLDRYIEGKCPSCGSHAVGDQCDECSEIFESEELLEKKCIFCKSEPVIKE 181

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            +  FF LS  ++ +   Y     +      +     ++  GL+D +++R  F+WG+ +P
Sbjct: 182 TKHLFFALSKLENDVKRIYIRQNGWR--ENAQKITNRYLNEGLRDRAVTRD-FNWGVDVP 238

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
            +      +YVWI+A+  YLT +    +        +          V GKD + FH + 
Sbjct: 239 FEGFEDKKIYVWIEAVMGYLTASMKCLDERDEDYMEYWNGEDSRIYFVHGKDNIPFHTVI 298

Query: 275 WPAFLLSANLPLPK-KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +PA L    +  P  +  S  ++  +G+  S      I P  ++E+  VD +RY+L+   
Sbjct: 299 FPAILSGLGIKRPNIREISSEYMKLEGKNFSAVKNWAIWPDYLMEKYNVDLIRYYLISNG 358

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +         N +L    GNL++R ++ I K++DG IP        D++    
Sbjct: 359 PEVKDTDFTWKSFIHANNNELVGLFGNLINRVLAFIDKNFDGNIPKGS----VDKAFKDD 414

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++  ++ +N++     +AL  + S + + ++YFD +KPW   K + D+ S  +Y  ++
Sbjct: 415 MFKLYCDVGDNIEEGNFKKALEYIFSAIKKANKYFDDEKPWVNIKKDRDKCSECMYTCIQ 474

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +I  L+ L++ F+P  A KI   L    E +    +   +K G +    F+ +F R 
Sbjct: 475 IIANLSNLIEPFLPFAAKKIRGFL----EIKNPMWMPIEIKEGKI--NNFNILFDRI 525


>gi|242820726|ref|XP_002487564.1| methionyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218714029|gb|EED13453.1| methionyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 672

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 124/574 (21%), Positives = 223/574 (38%), Gaps = 80/574 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ ADV AR++R  G   L+  G+DE+G      A 
Sbjct: 14  RNILITSALPYVNNVPHLGNIIGSVLPADVFARYNRARGFPTLYICGSDEYGTATETKAL 73

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +    +     + + D  +I +D F RT         + +++ + + G I +  
Sbjct: 74  EEGVTPEELCAKYHAIHKGIYDWFNIEFDIFGRTPTAHQTKIVQDVFRGLWENGYIEERE 133

Query: 124 YSGWYSLRDEA--YYNDDEV--------YKGADGQYYNAQHNPVQWMEEE------GYFF 167
            +  Y   +    +  D  V          GA G   +   N +  +E +      G   
Sbjct: 134 TTQPYCPVEGHASFLADRFVEGECSICGDPGARGDQCDKCGNLLDPLEPDAKESGDGEEQ 193

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVI------------------------------ 197
            + A     L       +   P +R+ + +                              
Sbjct: 194 DVEARATGWLINPRCKLDGATPEKRKTKHLYLRLDALKDKIVPWFEKVSKENDWSINTTS 253

Query: 198 ---SFVKSGLKDLSLSRKTFDWGIKIPDD---------PQYIMYVWIDALTNYLTTTGYL 245
              S++  GLK  +++R    WG+ IP              + YVW DA   Y++ T   
Sbjct: 254 IVQSWIDRGLKPRAITRD-IKWGVPIPKGIKGLDEEAYKNKVFYVWFDACIGYVSITANY 312

Query: 246 DNPDG---SKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHG 294
            + D     K + W            +GKD + FH+I +P   L + +      K+ +  
Sbjct: 313 TDGDNLEGKKWEQWWKHPELVSLYQFMGKDNVPFHSIIFPGSQLGSGMTWTQVHKISATE 372

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           ++ ++G K SKS G  +      +  VG D  R++L+       D  +  D      N +
Sbjct: 373 YLNYEGGKFSKSKGVGVFGTSAKDTGVGPDIWRFYLLSRRPESSDTEFKWDEFVSTNNNE 432

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV----CSRVLQEIRENMQNQL 409
           L   +GNLV+R     +   +G++P   A  E+ +++L+      +  L+     M    
Sbjct: 433 LLKNLGNLVARVTKFCIAKMNGVVPEYSA--EAGKAVLTEHENQVNTHLKSYNTYMDATK 490

Query: 410 IHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           +  AL  ++ + S  ++     K    L    PDR + V+ + +  I  LA +L  F+P+
Sbjct: 491 MRPALNDIMHISSLGNKLLQDNKLDNRLFTEEPDRCAAVINIALNHIHLLASILSPFMPQ 550

Query: 469 LANKIFDILFVADENRCFQSL-DQRLKPGFMLHK 501
            +  IF+ L    E R  +      LKPG  L +
Sbjct: 551 TSKSIFEQLGAVPEARIPEKWVTDALKPGHKLGE 584


>gi|111115415|ref|YP_710033.1| methionyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263519|ref|ZP_03435514.1| methionyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|123145679|sp|Q0SMS1|SYM_BORAP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110890689|gb|ABH01857.1| methionyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215980363|gb|EEC21184.1| methionyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 724

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 118/539 (21%), Positives = 222/539 (41%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I+ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLITAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H +T +  + K+   G I +  
Sbjct: 62  IEKTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQETVQNFFLKLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDLIFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYYES--------HPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y                P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYIDLPKIKTKLEKWIKNPTTSKNWNTNALKMTNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP--ADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGYENKVFYVWFDAPIGYISITKNIVKNWESWWKNNKQVNLVQFIGKDNILFHTIM 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPCIKIGSKENWTTLNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  E I 
Sbjct: 361 NRPEKSDFQFIWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQHKFWEQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +N  +  AL +++ + S  ++ F   +PW+ K+++P     ++   
Sbjct: 421 PKYNKIL----NLFKNTELKSALKEILKISSFGNKIFQDNEPWKRKESSPQEIKELILNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFVEILFNKL 532


>gi|51598840|ref|YP_073028.1| methionyl-tRNA synthetase [Borrelia garinii PBi]
 gi|68565975|sp|Q660T5|SYM_BORGA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51573411|gb|AAU07436.1| methionyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 724

 Score =  279 bits (714), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 228/539 (42%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               +     ++  +  + +    +I +D F RTT K H D  +  + K+   G I +  
Sbjct: 62  IEKTSPLELCNKYYKIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              ++  +D  +  D  V           KG   +  +   NP+  +  +          
Sbjct: 122 TEQFFCNKDSIFLADRYVIGECPECQSIAKGDQCENCSKLLNPIDLINPKCIICKNKPVL 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   +   E  +     ++  +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTNHLYIDLPKIKRKLEKWIKNSTTSKNWNTNALKMTNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  L     S  K       +  IGKD + FH + 
Sbjct: 241 PVPKKGYENKVFYVWFDAPIGYISITKNLVKNWESWWKNNEQVNLVQFIGKDNILFHTVI 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P+  + +        ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPSIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I+
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQII 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K ++P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKRIEFTEILFNKL 532


>gi|218249303|ref|YP_002375095.1| methionyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226695276|sp|B7J2F0|SYM_BORBZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218164491|gb|ACK74552.1| methionyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 734

 Score =  279 bits (714), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 217/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G+  L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              ++  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|110803500|ref|YP_699779.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684001|gb|ABG87371.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 514

 Score =  279 bits (714), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 118/491 (24%), Positives = 220/491 (44%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + DKG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYDKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G +    N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCQKCCDTLDE----FGVEDGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            ++  GL+D  ++R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLDGGLRDKIVTRE-INWGIEVPVEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 KVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GN  +R ++ I K+++G I          ++I+    R    +    +N      + ++
Sbjct: 355 LGNFTNRVLTFIKKNFNGEIKRE-ELPLQWKNII---IRTYASVGNKFENGEFKSGVKEI 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICAQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDTKWSFEE 481


>gi|312211904|emb|CBX91988.1| hypothetical protein [Leptosphaeria maculans]
          Length = 738

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/518 (21%), Positives = 206/518 (39%), Gaps = 40/518 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G    
Sbjct: 11  VEGERNVLITSALPYVNNVPHLGNIVGSVLSADVFARFSRARGYNTLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    VT K   D+      ++    +IS+D F RT  ++  D  + ++ K+   G +
Sbjct: 71  TKAIEEKVTPKELCDKYYALHSEVYKWFNISFDHFGRTPTQQQTDIAQDIFTKLYKNGYL 130

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQ---------- 158
            +   +  Y    +++  D  V            +G          +P++          
Sbjct: 131 EEQVTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDG 190

Query: 159 ----WMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E +  +  L   Q  +  ++E   +             S++K GL+   ++R  
Sbjct: 191 ATPVPRETKHVYLGLDKLQPAVQKWFEEESKKGNWSSNGIQITASWLKEGLRPRGITRD- 249

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +      +MYVW DA   Y++ T      +  K    P  +     +GKD +
Sbjct: 250 LKWGTAVPLEGYEDKVMYVWFDACIGYVSITA-TYTDEWQKWWHNPEQVKLYQFMGKDNV 308

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH + +P   +    N  +   + +  ++ ++  K SKS    +      E  +  D  
Sbjct: 309 PFHTVVFPCSQIGTKDNWTMLNTISTTEYLNYENGKFSKSRNIGVFGNNAKETGISSDVW 368

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFT 384
           RY+L+       D  ++  G     N +L   +GN V+R +  +  K YD +IP    F 
Sbjct: 369 RYYLLSHRPETGDTEFEWAGFIAANNNELLKNLGNFVNRVIKFVNSKIYDSVIPDYTKFD 428

Query: 385 ESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
           +          + +L+     +++  I  AL+  + L S  ++     K   +L    PD
Sbjct: 429 DPYFTEHKKKVNDLLKRYISELEDVKIRAALSTALHLSSLGNQLLQDNKLDNKLATEQPD 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           R + V+ + +  I  LA L+Q ++P     I   L   
Sbjct: 489 RCAAVVGLALSHIHLLASLIQPYMPDTTTAILTQLNAP 526


>gi|219685229|ref|ZP_03540049.1| methionine--tRNA ligase [Borrelia garinii Far04]
 gi|219673325|gb|EED30344.1| methionine--tRNA ligase [Borrelia garinii Far04]
          Length = 724

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/539 (20%), Positives = 227/539 (42%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYICGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + K+   G I +  
Sbjct: 62  IEKTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              ++  +D  +  D  V           KG   +  +   NP+  +  +          
Sbjct: 122 TEQFFCNKDSIFLADRYVIGECPKCQSIAKGDQCENCSKLLNPIDLINPKCIICKSKPVL 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E  +     ++  +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTNHLYIDLPKIKTKLEEWIKNSTASKNWNTNALKMTNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH + 
Sbjct: 241 SVPKKGYENKVFYVWFDAPIGYISITKNIVKNWESWWKNNEQVNLVQFIGKDNILFHTVI 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   +VI   +  D  R+++  
Sbjct: 301 FPCIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I+
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDVIETIEIQNKFWKQII 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K ++P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKRIEFIEILFNKL 532


>gi|307595974|ref|YP_003902291.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551175|gb|ADN51240.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 584

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 127/544 (23%), Positives = 239/544 (43%), Gaps = 44/544 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R +  I +A  Y  A PH+G+    ++ ADV  R+ RL G DV+F +G+DEHG  I   A
Sbjct: 14  RRRWVIGSAWPYIYAVPHLGNLIGSVLSADVFTRYLRLRGDDVVFVSGSDEHGTPIEVEA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              GV  +   D+     + + ++ +IS+D++ RT    H +  +  + K+   G ++  
Sbjct: 74  LQLGVKPRELTDRMHEIVKRLFELWEISFDNYTRTESPVHREFVKEFFLKLYRNGYVFTR 133

Query: 123 CYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQ------------------- 158
                Y  +D  Y  D        Y G D    +   N  +                   
Sbjct: 134 EDEVPYCPKDRIYLPDRFIIGTCPYCGYDKARGDQCENCGRLLEPRLLINPRCAICGSKP 193

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            W++   ++  L+  +D++  Y E +    LP   +   +  +K GL+  +++R    WG
Sbjct: 194 IWVKTRHWYLDLTKLEDRVRKYVEGNTA--LPENAKQMSLGMLKEGLRPRAITRDN-KWG 250

Query: 218 I--KIPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           I    P      +YVW +A+  Y+  T   +    +  + K +  D     +  +GKD +
Sbjct: 251 IEAPFPGADNKTIYVWFEAVLGYISATIEYFRGKGNEDEWKRYWFDPNTRVVFFVGKDNI 310

Query: 269 RFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            FH I  PA L+++  P   P    S  ++L +G+K SKS    I   E +  + VD  R
Sbjct: 311 PFHVILLPAMLIASGDPYVMPYTTASTEYLLFEGKKFSKSQRIGIWIDEALALMPVDYWR 370

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + L+ +   G+D  +      + +N+ L + IGN + R ++ I   ++G +P+ G+  + 
Sbjct: 371 FVLIYQRPEGRDTSFAWHQALEVINSILNDVIGNFIHRVLTFISTRFNGEVPS-GSLRDV 429

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D           +   E+ +   +  AL +V+ +    +RY + ++PWEL K+N D A  
Sbjct: 430 DVKYRDEALSHFRSSEEHYEKIELKDALMEVVEIARVGNRYLNERQPWELIKSNRDEAGA 489

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V+   + +++ L+I L   +P+    ++ +         +    +  +PG  +     P+
Sbjct: 490 VILNALHMVKALSIGLWPVMPRSMEDLWSMAGFG--KLTWSDAYEPPRPGTRVSN-VRPL 546

Query: 507 FPRF 510
           F + 
Sbjct: 547 FRKI 550


>gi|225552399|ref|ZP_03773339.1| methionyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371397|gb|EEH00827.1| methionyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 734

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/539 (20%), Positives = 218/539 (40%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              +Y  +D  +  D  V           KG      +   NP   +  +    +     
Sbjct: 122 TEQFYCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 174 DKLLSYY--------ESHPEFILPIERRNEVISFVKS-------GLKDLSLSRKTFDWGI 218
            K    Y        +       P   +N   + +K        GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQRFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|327310210|ref|YP_004337107.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946689|gb|AEA11795.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 568

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 122/540 (22%), Positives = 226/540 (41%), Gaps = 40/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  I +A  Y  + PH+G+    ++ ADV AR+ RL G +V+F +G+D HG  I   A  
Sbjct: 3   KFVIGSAWPYVQSVPHLGNMIGSVLSADVYARYLRLRGHEVVFVSGSDMHGTPIEVEAIQ 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  + +  +      ++    +IS+D +  T    H +  +  +KKI + G ++    
Sbjct: 63  LGVDPQDYAMRMHGIVAELFRRWNISFDLYTHTHSNTHIEFTKDFFKKIYENGYVFTQED 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y   D+ +  D  V            +G   +       P   +E            
Sbjct: 123 ELPYCPNDKIFLPDRFVIGKCPYCGYERARGDQCERCGRLLEPRLLIEPRCAVCGAKPEW 182

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-- 219
            +   +Y                   LP   R   +  +K GL+  +++R    WGI   
Sbjct: 183 RRTKHWYLDLRKLEDAVRRYVEGNKELPQNAREMALGILKEGLRPRAITRDN-KWGIPAP 241

Query: 220 IPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
            P      +YVW +A+  Y+      +    +  + + +  D     +  +GKD + FH 
Sbjct: 242 FPGAEGKTIYVWFEAVLGYISAVKEYFEKRGEPDRWREFWLDPSTKAVFFVGKDNIPFHV 301

Query: 273 IYWPAFLLSANLPLPKKV--FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I  PA +++       ++   S  ++ ++G+K SKS    I   E ++ + VD  R+ LV
Sbjct: 302 IILPALIMANGGGYTTRLTTSSTEYLNYEGDKFSKSRRWGIWIDEALKLMPVDYWRFVLV 361

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +      + VN  L + +GN   R +S I   + G++P PG  T  D   
Sbjct: 362 YMRPENRDVDFTWQTAVEVVNKVLNDDVGNFAHRVLSFIKTRFGGVLPGPGPSTPPDAEF 421

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +   ++ ++    +     +  AL   + +  E ++Y + + PW+L K  P+ A TV+Y 
Sbjct: 422 VEAVAKYVKSAEAHYDRIELKEALMDAVEIAREGNKYLNLRAPWQLVKERPEEAGTVMYN 481

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + +  LA LL   +P  A K++ ++ +    R + + D    PG  L +  +P+F + 
Sbjct: 482 SYKALMALAALLYPVIPSSAEKLWSMMGLQPPVR-WPNADPA--PGIKLGE-VEPLFKKI 537


>gi|313127143|ref|YP_004037413.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293508|gb|ADQ67968.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 688

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/537 (20%), Positives = 217/537 (40%), Gaps = 47/537 (8%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D+ +R  +  G +  F +G+D HG  +A  A+  GVT
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDIYSRALKRLGQETAFVSGSDMHGTPVAVNAEKEGVT 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  ++   +++     +I +D++  T ++ + +  + L + + D+G +YK      Y
Sbjct: 74  PESFALRHHEKYKETFPKFEIEFDNYGHTHDETNTELTQELVRTLEDEGYVYKKQIPVAY 133

Query: 129 SLRDEAYYNDDEVYKGADGQYYN-------------------------AQHNPVQWMEEE 163
               + +  D  V         +                            NP ++ +  
Sbjct: 134 DPDADQWLPDRYVEGTCPYCGEHARGDECDEGCGRHLEPGEIEDPVSAITGNPAEYRDRN 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIP 221
             FFR++  Q+ L  +             +N+   +++  L+D  ++R   DWGI     
Sbjct: 194 HRFFRVTELQEYLQEFI---DRLEGTSNAQNQPREWIEGELQDWCITRD-MDWGIDYPGE 249

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPAD---LHVIGKDILRFHAIY 274
            +   ++YVW+DA   Y+++T               K W      +H+IG+DI++ H ++
Sbjct: 250 TEDDLVLYVWVDAPIEYISSTKQYTERAGADTFDWEKAWKESGDIVHIIGRDIIQHHTVF 309

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREI 333
           WPA L + +   P+ V + GFI   G+  S S    +   E ++E      +RY+L    
Sbjct: 310 WPAMLRATDHVEPRAVMASGFITLNGKGFSTSRNRAVWADEYLDEGFDPALIRYYLATNG 369

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +  +  + RVN +L   +GN + RS+    ++Y+G         +    +   
Sbjct: 370 GFQQDVDFSWEKFRNRVNNELVGTVGNFLYRSLLFAHREYEGTPDA-----DLSAEVKER 424

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               ++E    + +  +      V+ L    + Y    +PW+L   +      V+   V+
Sbjct: 425 IYDAIEEFEAGVNDYSVREVGNSVVRLAQFGNEYIQGHEPWKL--DDGAEKRQVIRDCVQ 482

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + + +A+L +   P  A K++D L    +            P     +  +P F + 
Sbjct: 483 IAKAIAVLFEPVAPGKAEKLWDDLNEDGDVHAVGVEAALDAPATTFDEPSEP-FEKI 538


>gi|296828372|ref|XP_002851320.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238838874|gb|EEQ28536.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 650

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/546 (21%), Positives = 224/546 (41%), Gaps = 51/546 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV AR+++  G   L+  GTDE+G     
Sbjct: 11  QGQRNILITSALPYVNNVPHLGNIVGSVLSADVFARYNKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +   ++ +R  +++    +I +D F RT  K H +  + ++K++ + G + 
Sbjct: 71  KALEEGVTPEELCEKYNRIHQEVYKWFNIGFDIFGRTPTKPHTEISQGIFKRLYENGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   + +   +           
Sbjct: 131 EKTTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   +            P   R    S++K GL+   ++R   
Sbjct: 191 TPVRRQTRHIFLLLDKLQPQIDSWASSAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T     P+  K    P D+     +GKD + 
Sbjct: 250 KWGVPVPLDGYEKKVLYVWFEACIGYPSITA-NYTPEWEKWWRNPEDVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFT 384
           Y+L++      D  ++        N +L   +GNLV+R + ++   K Y+ +IP     T
Sbjct: 369 YYLLKNRPESGDTQFEWKSFIDSNNGELLAKLGNLVNRVIKLVASPKAYNSVIP-EFTVT 427

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E     L   + +L++    M+   +   +   + +    +    A K    L    P+R
Sbjct: 428 EPFYPALEEVTSLLRQYINEMEGVHLRAGILTAMKIAEAGNGLIQANKLDNSLIANEPER 487

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--------RLKP 495
           A+TV+ + V +I   + +   ++P     I + L          SLD+         +KP
Sbjct: 488 AATVVGIVVNLIHLCSSIFCPYLPATCVSILEQL--DAPASLIPSLDEIKDGWKPTIIKP 545

Query: 496 GFMLHK 501
           G  + K
Sbjct: 546 GHRVGK 551


>gi|257076299|ref|ZP_05570660.1| methionyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 721

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 127/523 (24%), Positives = 224/523 (42%), Gaps = 38/523 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           EREK+ ++ A+ Y N   H+GH A   + AD+  RF+R+ G +VLF +G+DE+G  I  +
Sbjct: 22  EREKILVNCALPYANGPLHLGHIAGAYLGADIFVRFNRMSGNEVLFISGSDEYGTPITIS 81

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   V  +   D+      +  + LDI +D F RT++  H       +  + +KG + K
Sbjct: 82  AEKNHVPPQEIADKYHIEQINSFNSLDIIFDKFTRTSDPEHVKDVDEFFINLLEKGYLVK 141

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQ---------HNPVQWMEEEG 164
                 + +    +  D  +             G   +            NPV  M    
Sbjct: 142 RYMISPFCVEINKFMPDRYIEGECPYCGYKEARGDQCDNCGQTLDPIELINPVCKMTGNS 201

Query: 165 YFFRLSAYQDKLLSYYESH------PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             F+++ +    L   +         +            +F+  GL   +++R   DWG+
Sbjct: 202 PIFKVTDHFFLKLDSLQEKLSEFIDSKTYWRPNVLKFTQNFIGEGLHPRAITRD-LDWGV 260

Query: 219 KIPDD--PQYIMYVWIDALTNYLT--TTGYLDNPDGSKAKFWPAD-----LHVIGKDILR 269
           KIP        +YVW +AL  Y+T       +       K +  D      + IGKD + 
Sbjct: 261 KIPLKGYENKKIYVWFEALIGYITGARVYSEETGKPEYWKEFWMDKNIKSYYFIGKDNIP 320

Query: 270 FHAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           FH I WPA LL      LP  V ++ ++  +GEK SKS G      E+++ V  ++LRY+
Sbjct: 321 FHTIIWPAMLLAHGGFNLPYNVPANEYLRFEGEKFSKSRGIGFTVDEMLKFVDKNSLRYY 380

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           +   +    D  +  +  + +VN++L +  GN + R  S I K+       P      D 
Sbjct: 381 MASVLPETGDSDFSMNEFQLKVNSELIDKYGNYIYRVESFIKKN-GLSPHEPETMDTKDM 439

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            ++        E    +    I R ++  + +V   + YF    PW+L K + ++ +  L
Sbjct: 440 EMMKFLEDKFSEYSMEVSGIHIKRGISIWLEIVMAANNYFTESAPWKLIKEDTEKLNEKL 499

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSL 489
           YV++++ + L  +L  +VP  +  I+    V++  EN  F  +
Sbjct: 500 YVSLKIGQYLTAMLYPYVPSASESIWQTFGVSENLENATFNDV 542


>gi|226321211|ref|ZP_03796746.1| methionyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233379|gb|EEH32125.1| methionyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 708

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/539 (20%), Positives = 222/539 (41%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G++ L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIETLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T     ++     + +    +I +D F RTT K H D  +  + ++   G I +  
Sbjct: 62  IENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              ++  +D  +  D  V           KG      +   NP   +  +          
Sbjct: 122 TEQFFCNKDSMFLADRYVIGECPECQSMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E  +     ++  +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKSWNTNALKMTKAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DA   Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  +I T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRKFFGDVIETIEIQNKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K  +P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKELISNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQQFFG---NSYQFSTKILGTKSGIKKIEFTEILFNKL 532


>gi|254419987|ref|ZP_05033711.1| methionyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186164|gb|EDX81140.1| methionyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 572

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/557 (20%), Positives = 206/557 (36%), Gaps = 55/557 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLD------GLDVLFTTGTDEHGQKI 58
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R          +VL+   TDEHG   
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVWARFKRAQVLPDGSRHEVLYICATDEHGTPA 62

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
             AA  AG   + + D+     +       +SYD F R++  ++H   +   + +   G 
Sbjct: 63  ELAAAAAGQDVRTYCDEQHEIQKAAGQAFGLSYDWFGRSSNPQNHRLTQHFAEALEKNGL 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFF 167
           I +      YS+ D  +  D  V            +G          +P   ++      
Sbjct: 123 IEERVDRMIYSIDDARFLPDRYVEGTCPHCGHVGARGDQCDNCGRLLDPTDLIDPYSSVS 182

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRN-------------EVISFVKSGLKDLSLSRKTF 214
                + +   +       I P  R                    +  GL D  ++R   
Sbjct: 183 GSKNLEVRDTRHLYLLQTRIEPQIRAWVDSKTGWQVLAKSIAYKHLDEGLIDRGITRD-L 241

Query: 215 DWGIKIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP------ADLH 261
            WG+ +  D          + YVW DA   Y+  T       G   + W        D+ 
Sbjct: 242 AWGVPVLKDGFPRPGMEDKVFYVWFDAPIEYIAATEEWAEATGGSWRDWWRLDEGAEDVR 301

Query: 262 ---VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEV 316
               +GKD + FH + +PA ++ +  P     ++ +  ++   G K S S    +   + 
Sbjct: 302 YVQFMGKDNVAFHTVSFPATIIGSGEPWKTVDQLKAFNWLNWYGGKFSTSQKRGVFMDQA 361

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E +  D  R+ L        D  +  +  +   N DLA+ +GN V+R V      +DG+
Sbjct: 362 LELLPADYWRWRLTAYGPEHADSAFTWEDFQASTNKDLADVLGNFVNRIVKFAESKFDGV 421

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G     +  + +     + E  E  +     +A + + ++    + Y     PW  
Sbjct: 422 VPEGGEAGPVEIQLEADIKAGIAEATEQFEAMEFRKAASALRAVWVLGNEYLQVAAPWTA 481

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            KT+ DRA+  +   + ++   A L    +P  A KI   +  +D    +   D+ +   
Sbjct: 482 LKTDRDRAAVGVRTGLNLVALFARLAAPILPFSAEKIAASVGSSD--LSWPGADEDVLNS 539

Query: 497 FMLHKTFDP---IFPRF 510
             + +       +F + 
Sbjct: 540 LAVGQAVAAQGVLFAKI 556


>gi|329889121|ref|ZP_08267464.1| methionyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844422|gb|EGF93986.1| methionyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 569

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/534 (21%), Positives = 211/534 (39%), Gaps = 50/534 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G DVL+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGNLAGSMLPADVWARFMRARGHDVLYVCATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG   + + D+  +  +  AD   +S+D F R++   +    +   K + ++G I +   
Sbjct: 63  AGQDVRTYCDEQHQVQKKAADAFSLSFDIFGRSSNAPNTRLTQHFAKVLEERGLIEERVD 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS+ D  +  D  V            +G          +P                +
Sbjct: 123 RMIYSIDDARFLPDRYVEGTCPHCAYEKARGDQCDNCGRLLDPTDLINPYSAVSGSRNLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +    +   +   D + ++ ++      P+ R +     +  GL D  ++R    WG+
Sbjct: 183 VRDTRHLYLLQTKIADDVRAWVDARSPQWQPLAR-SIAYKHLDEGLIDRGITRD-LKWGV 240

Query: 219 KI--------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA---------DLH 261
            +        P     + YVW DA   Y+  T       G   + W            + 
Sbjct: 241 PVVGPDGGPRPGMEGKVFYVWFDAPIEYIGATEEWAEQTGGNWRSWWRLDEGAEDVRYVQ 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH + +PA +L +  P     ++ +  ++   G K S S+G  +   + +E 
Sbjct: 301 FMGKDNVAFHTVSFPATILGSGEPWKTVDQLKAFNWLNWYGGKFSTSMGRGVFMDQALEL 360

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  R+ L        D  +  +  +   N DLA+ +GN V+R V      +DG+ P 
Sbjct: 361 LPADYWRWHLTAYGPEHSDAAFTWEQFQSTTNKDLADVLGNFVNRIVKFTESKFDGVAPE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +E + +     L  +    +     +A     +L    + Y     PW   KT
Sbjct: 421 GGEPGALEEKLAADVKAALASLTYEFEAMEFRKAAQAARALWVLGNEYLQEAAPWTALKT 480

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           + +RA+ V+   + ++   A +   F+P+ A +I   +   D    +  ++  L
Sbjct: 481 DRERAAVVVRTGLSLVALFARVTAPFMPEAAARIAATVGATD--LSWPDVEGDL 532


>gi|169343242|ref|ZP_02864253.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298540|gb|EDS80621.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 514

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 118/491 (24%), Positives = 219/491 (44%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPAEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 KVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGA 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGN  +R ++ I K+++G I          ++I+    R    +    +       + ++
Sbjct: 355 IGNFTNRVLTFIKKNFNGEI-KGEELPLQWKNIIR---RTYASVGNKFEEGEFKSGVKEI 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDTKWSFKE 481


>gi|311087576|gb|ADP67655.1| methionyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 547

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   HIGH  E I AD+  R+HR+ G +V F +  D HG  I   AQ+
Sbjct: 6   RKILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFVSADDAHGTAIMLKAQD 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++    +       +       IS+D++  T    +    R ++  +++KG I +   
Sbjct: 66  LEISPNKLIKNIRIEHQIDFSNFKISHDNYYSTHSLENLYLSRKIFTCLNEKGLIKEKKI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y    + +  D  +             G + +  +A + P   +             
Sbjct: 126 FQLYDTVKKIFLPDRFIKGTCPICKSKNQYGDNCEICSATYEPTDLINPISVISGKKPIL 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              +  +F L ++ + L  +  S     L      +   + K GLK  ++SR    +G K
Sbjct: 186 KNTKHLYFDLPSFTNMLKKWIHSGV---LEESVIKKTEEWFKVGLKSWAISRDAPYFGFK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP+ P    YVW+DA   Y++    L       +  + W  +      H IGKDI+ FH 
Sbjct: 243 IPNHPNKYFYVWLDAPIGYISAFKNLCFKSKKLNFNELWNQNSNYELYHFIGKDIIYFHT 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L + +   P  +F HG +   G K+SKS G +I   + I+    D+LRY+   +
Sbjct: 303 LFWPAILEAVSFRQPSGIFVHGHLTMNGLKLSKSRGALIKASDWIQYFDSDSLRYYYASK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +++N+D+ N + NL +R+ S I K ++G +        S+  + 
Sbjct: 363 LSNKTHDIEINLEDFIQKINSDIVNKLVNLAARNASFINKYFNGYLSDK----LSNIKLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
                    I +  +N+     + + + L+   ++Y + +KPW++K+T  +      +  
Sbjct: 419 KYFVNTSSSIEDFFENREFSFIVKESMRLLDIANQYINEKKPWKIKRTEENIRELQNICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R + I L+  VP LA K    L        +  + + L     ++K F P++ R
Sbjct: 479 MGINLFRIIMIFLKPIVPDLAIKTESFL---ISKLTWDGIKKPLLS-HQINKFF-PLYKR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|301026438|ref|ZP_07189877.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299879675|gb|EFI87886.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 618

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 116/488 (23%), Positives = 214/488 (43%), Gaps = 48/488 (9%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              AQ  G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G 
Sbjct: 1   MLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGF 60

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----- 162
           I     S  Y      +  D  V             G + +   A ++P + +E      
Sbjct: 61  IKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVS 120

Query: 163 ---------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR  
Sbjct: 121 GATPVMRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDA 177

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGK 265
             +G +IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGK
Sbjct: 178 PYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGK 237

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI+ FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     +     D+L
Sbjct: 238 DIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSL 297

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+   +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A  
Sbjct: 298 RYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----ANE 353

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PD 442
            +D  +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K      
Sbjct: 354 LADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDA 413

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
               +  + + + R L   L+  +PKL  +    L  A     +  + Q L  G  ++  
Sbjct: 414 DLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTA---LTWDGIQQPLL-GHKVN-P 468

Query: 503 FDPIFPRF 510
           F  ++ R 
Sbjct: 469 FKALYNRI 476


>gi|15616730|ref|NP_239942.1| methionyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681485|ref|YP_002467870.1| methionyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682041|ref|YP_002468425.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471164|ref|ZP_05635163.1| methionyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11134932|sp|P57210|SYM_BUCAI RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782855|sp|B8D8R1|SYM_BUCA5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782856|sp|B8D715|SYM_BUCAT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|25293139|pir||D84942 methionine-tRNA ligase (EC 6.1.1.10) [imported] - Buchnera sp.
           (strain APS)
 gi|10038793|dbj|BAB12828.1| methionyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621774|gb|ACL29930.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624328|gb|ACL30483.1| methionyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311085852|gb|ADP65934.1| methionyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087005|gb|ADP67085.1| methionyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 547

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 124/541 (22%), Positives = 233/541 (43%), Gaps = 47/541 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K+ ++ A+ Y N   HIGH  E I AD+  R+HR+ G +V F +  D HG  I   AQ+
Sbjct: 6   RKILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFVSADDAHGTAIMLKAQD 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++    +       +       IS+D++  T    +    R ++  +++KG I +   
Sbjct: 66  LEISPNKLIKNIRIEHQIDFSNFKISHDNYYSTHSLENLYLSRKIFTCLNEKGLIKEKKI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
              Y    + +  D  +             G + +  +A + P   +             
Sbjct: 126 FQLYDTVKKIFLPDRFIKGTCPICKSKNQYGDNCEICSATYEPTDLINPISVISGKKPIL 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              +  +F L ++ + L  +  S     L      +   + K GLK  ++SR    +G K
Sbjct: 186 KNTKHLYFDLPSFTNMLKKWIHSGV---LEESVIKKTEEWFKVGLKSWAISRDAPYFGFK 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP+ P    YVW+DA   Y++    L       +  + W  +      H IGKDI+ FH 
Sbjct: 243 IPNYPNKYFYVWLDAPIGYISAFKNLCFKSKKLNFNELWNQNSNYELYHFIGKDIIYFHT 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L + +   P  +F HG +   G K+SKS G +I   + I+    D+LRY+   +
Sbjct: 303 LFWPAILEAVSFRQPSGIFVHGHLTMNGLKLSKSRGALIKASDWIQYFDSDSLRYYYASK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++    D   + +   +++N+D+ N + NL +R+ S I K ++G +        S+  + 
Sbjct: 363 LSNKTHDIEINLEDFIQKINSDIVNKLVNLAARNASFINKYFNGYLSDK----LSNIKLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
                    I +  +N+     + + + L+   ++Y + +KPW++K+T  +      +  
Sbjct: 419 KYFVNTSSSIEDFFENREFSFIVKESMRLLDVANQYINEKKPWKIKRTEENIRELQNICT 478

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           + + + R + I L+  VP LA K    L        +  + + L     ++K F P++ R
Sbjct: 479 MGINLFRIIMIFLKPIVPDLAIKTESFL---ISKLTWDGIKKPLLS-HQINKFF-PLYKR 533

Query: 510 F 510
            
Sbjct: 534 I 534


>gi|114771637|ref|ZP_01449041.1| methionyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114547709|gb|EAU50599.1| methionyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 570

 Score =  277 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 115/554 (20%), Positives = 226/554 (40%), Gaps = 51/554 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+     + +DV ARF R  G +V+F   TDEHG     AA  
Sbjct: 3   RTLITSALPYINGVKHLGNLIGSQLPSDVYARFCRAKGHEVMFICATDEHGTPAELAAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG     +  +      ++A    +S+D F R++ +++H   +    K+++ G I +   
Sbjct: 63  AGKNVADYCMEMHDVQFELARGFRLSFDHFGRSSSEQNHLLTQYFAGKLAENGLIEEISE 122

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPV---------------Q 158
              YS  D+ Y  D  +            +G   +    Q  P                +
Sbjct: 123 KQVYSNTDKRYLPDRYIEGECPNCGSPDARGDQCENCTKQLEPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  + + S  ++KL ++ +   ++ +      +       GL+D  ++R   DWG+
Sbjct: 183 VRETKHLYLKQSKMREKLDNWIKQKSDWPILTTSIAKKWLHDGDGLQDRGITRD-LDWGV 241

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD-------- 259
            +             + YVW DA   Y+  T       + P     ++W  D        
Sbjct: 242 PVKKGAVDWGGMEGKVFYVWFDAPIEYIAATAEWAAKNNKPKEEWERWWRTDKGAENVNY 301

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +  +GKD + FH + +PA ++ A  N  L   + S  ++ + G + S S G  +   + +
Sbjct: 302 VQFMGKDNVPFHTLSFPATIMGADDNWKLVDFIKSFNYLNYDGGQFSTSKGRGVFMNQAL 361

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           + +  D  R++L+  +    D  +  D  ++ VN DLA+ +GN VSR        +  +I
Sbjct: 362 DILPSDYWRWWLLSNVPESSDSEFTWDSFQQGVNKDLADVLGNFVSRITKFCRSKFGEII 421

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P    +   + ++++     +     NM    + ++ A + ++ S  + Y     PW L 
Sbjct: 422 PEGNEYGPREFTVINQLEERIASYENNMAKMEVRKSAADLRAIWSIGNEYLQDAAPWTLF 481

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKPG 496
           K +P  ++T++   + +I   A L + F+P   + +   + V         +    LK G
Sbjct: 482 KEDPQSSATIVRFALNLIPLYAALSEPFIPDATDTMVTAMNVDKLWPENISNSLTLLKAG 541

Query: 497 FMLHKTFDPIFPRF 510
                  + +F + 
Sbjct: 542 HKF-SVPEVMFAKI 554


>gi|307329475|ref|ZP_07608636.1| methionyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306884884|gb|EFN15909.1| methionyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 577

 Score =  277 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 124/555 (22%), Positives = 224/555 (40%), Gaps = 53/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYMRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F  Q     + + D   +++D F R++  ++    + + +++   G I +   
Sbjct: 63  AGLPVDEFCAQQHEAQKAIYDGFGLAFDYFGRSSSAQNVQITQTIARELKANGFIEERSI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSNADGRFLPDRYIEGTCPHCGYDKARGDQCENCTRVLDPTDLIDARSAISGSSDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S   +  ++ +        P    +    ++  GL+D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLAE-EVASWVDERGKDWPTLASSIARKWLNEGLQDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLH-------V 262
            +P D          + YVW DA   Y+  T    + D      K W  D+         
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWADLDPENRDWKSWWYDVDETVRYTEF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + KD + FH + +PA LL       K   V +  ++ + G K S S    +     +E +
Sbjct: 301 MAKDNVPFHTVMFPATLLGTRDAWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDAALEVL 360

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 361 PADYWRYFLMANAPESDDTSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAG 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  E++E +    +R+L E  E+M      +A A + +L S  + Y + + PW   KT+
Sbjct: 421 QAAGEAEERLGEEIARLLAEYEEHMDALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-----LKP 495
            + A+  L   + +I   AI+ + F+P  A  +     ++++   +   ++      +  
Sbjct: 481 QEAAALTLRTAMNLIHLYAIVSEPFIPSSARAMRSAFALSEDTAVWVGQEEAKALASVPA 540

Query: 496 GFMLHKTFDPIFPRF 510
           G         +F + 
Sbjct: 541 GTAFTVPP-VLFAKI 554


>gi|254390056|ref|ZP_05005277.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442082|ref|ZP_08216816.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197703764|gb|EDY49576.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 574

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 128/557 (22%), Positives = 227/557 (40%), Gaps = 55/557 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ AD  +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADAYSRYLRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++   F  Q     + + D  ++++D F R++ +++ +  +   +K+ + G I +   
Sbjct: 63  AGLSVAEFCAQAHVAQKAVYDGFELAFDYFGRSSSQQNSEITQHFARKLHENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        Y G D    +   N                       +
Sbjct: 123 RQVYSPADGRFLPDRYVVGTCPYCGYDKARGDQCENCTRVLDPTDLVNPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  + +S      P    +    ++  GL D +++R   DWGI
Sbjct: 183 VRETKHLFLLQSKLQREVEEWIDS-VSAQWPQLSTSIARKWLTEGLHDRAITRD-LDWGI 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN------PDGSKAKFWPADL----- 260
            +P D          + YVW DA   Y+  T    +          K+ ++ AD      
Sbjct: 241 PVPADTWPDLAAEGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWYEADDTVHYS 300

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             + KD + FH + +PA  L    P  K   V    ++ + G K S S    +     +E
Sbjct: 301 QFMAKDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTYYGGKFSTSQKRGVFTDAALE 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P
Sbjct: 361 TLPGDYWRYFLLANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 E++  +    +R+L E  E+M+     +A A + +L S  + Y + + PW   K
Sbjct: 421 EGNHAGEAEAKLGEELARLLAEYEEHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEIK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RL 493
           T+PD A+  L   + +I   AI+ + F+P  A  +     +  +   + + +Q      +
Sbjct: 481 TDPDGAALTLRTAMNLIHLYAIVSEPFIPATAAVMRGAFALEGDTATWVTAEQAKALSAV 540

Query: 494 KPGFMLHKTFDPIFPRF 510
             G         +F + 
Sbjct: 541 PAGTAFTVPP-VLFAKI 556


>gi|159487881|ref|XP_001701951.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158281170|gb|EDP06926.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 796

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 115/549 (20%), Positives = 221/549 (40%), Gaps = 50/549 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R  + I++A+ Y N  PH+G+    ++ ADV AR+ R  G + ++  GTDE+G      
Sbjct: 7   GRRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRARGHNCIYVCGTDEYGTATETK 66

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+       +    DI++D F RT  +      + ++K +  +G + +
Sbjct: 67  ALEEGLTCQQICDKYHAIHAGIYQWFDIAFDRFGRTPTRAQTKIAQDIFKSLQSRGQLVQ 126

Query: 122 GCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------ 164
                 YS     +  D  V            +G          NP + +  +       
Sbjct: 127 QEMQQLYSEAAGKFLADRFVTGTCPKCGYEDARGDQCDGCGNLLNPTELIRPKCKLTGTT 186

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFD 215
              R + +    L       +  +         S         +++ GLK   ++R    
Sbjct: 187 PVMRSTRHVFLDLPQLSPQLQEYITTTSAQGGWSANCVTLTNAWMRDGLKLRCITRD-LK 245

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRF 270
           WG  +P +   + + YVW DA   Y++ T        +  K  P D   +  +GKD + F
Sbjct: 246 WGTPVPLEGFEEKVFYVWFDAPIGYISITANYTPDWEAWWKS-PKDVELVQFMGKDNVPF 304

Query: 271 HAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE---VIEEVGVDAL 325
           H + +PA LL    +  + + +    ++ ++G K SKS G      E   ++  + V   
Sbjct: 305 HTVIFPATLLGTGGDWTMMRNISVTEYLNYEGGKFSKSRGTGEQEEEESRLLTTIIVPGT 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKR--VNADLANGIGNL--VSRSVSMILKDYDGMIPTPG 381
              L +              L+     ++ L   + NL    R++  + K +DG++P   
Sbjct: 365 PLCLFQTPPRRTPRRPFTHVLRSTLPNSSQLFPTLPNLPTAPRALMFVSKFFDGVVPGAT 424

Query: 382 AFTESDESILSVC----SRV-LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           A  +++   L        RV + E    M+   +   L  V+S+ ++ +++    KPW  
Sbjct: 425 AAGQAEAEELGKTVGPKVRVPVDEYIAAMERIKLKEGLRLVMSISADGNKFLQDTKPWVA 484

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            K + D+ +T++  +V ++R L+ L+  ++P L+ KI   L +  E+    +L   L  G
Sbjct: 485 VKEDKDKCATLVATSVGLVRLLSALMAPYMPSLSAKILQQLNLPYESSV--ALSDELVAG 542

Query: 497 FMLHKTFDP 505
               ++  P
Sbjct: 543 CRQPQSLVP 551


>gi|149912132|ref|ZP_01900718.1| methionyl-tRNA synthetase [Moritella sp. PE36]
 gi|149804780|gb|EDM64822.1| methionyl-tRNA synthetase [Moritella sp. PE36]
          Length = 458

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 112/460 (24%), Positives = 200/460 (43%), Gaps = 40/460 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M    K+ +++A+ Y N   H+GH  E I  D+  RF +  G    +    D HG  I  
Sbjct: 6   MTSERKILVTSALPYANGPIHLGHMLEYIQTDIWVRFQKQRGNTCTYVCADDAHGTPIML 65

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +  + Q            ++ +D++  T    + +   +++ ++ D G I 
Sbjct: 66  KAQERGITPEAMIAQTKIEHMADFADFNVDFDNYHSTHSDENRELATMIYTRLRDNGHIK 125

Query: 121 KGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM--------- 160
               S  +    E +  D            E   G +     A ++P   +         
Sbjct: 126 TRVISQLFDPEKEMFLPDRFVKGICPECKSEDQNGDNCDACGATYSPTDLISPRSVVSGA 185

Query: 161 -----EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E YFF L A+ D L ++  S     L  E  N++  + ++GLK   +SR    
Sbjct: 186 EPVLKDSEHYFFDLPAFSDMLQTWTRSGA---LQDEIANKLAEWFETGLKQWDISRDAPY 242

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDIL 268
           +G +IPD P    YVW+DA   Y+ +   L +        +++  D      H IGKDI+
Sbjct: 243 FGFEIPDAPGKFFYVWLDAPIGYMGSFKNLCDRRDDLDFDEYFKKDSTTELYHFIGKDIV 302

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L       P  VF+HGF+   G+K+SKS G  I     ++ +  + LRY+
Sbjct: 303 NFHSLFWPAMLEGTGFRKPTGVFAHGFVTVNGKKMSKSRGTFIMARTYLDNLNPEYLRYY 362

Query: 329 LVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
              +++    D   + +   +RVN+D+   + NL SR+   I K +D       A   S+
Sbjct: 363 YAAKLSSKIVDLDLNLEDFAQRVNSDVVGKVVNLASRTAGFIYKRFD----AKLASEISE 418

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
            ++L+        I +  + +   +A+ ++++L  + + Y
Sbjct: 419 PALLAEFVAAGDTIAQYYETREFSKAIKEIMALADKANAY 458


>gi|239609857|gb|EEQ86844.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 636

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 112/545 (20%), Positives = 226/545 (41%), Gaps = 49/545 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ ADV A +    G   L+  GTDE+G     
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADVFASYK-ACGRPTLYVCGTDEYGTTTET 69

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  R++ +  +I +D F RT   +H +  + ++K++ + G + 
Sbjct: 70  KALEEGVTPEELCAKYNKLHREVYEWFEIGFDVFGRTPTAQHTEISQEIFKRLYENGFLT 129

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   N +   E +         
Sbjct: 130 EKTAEHPFCEKHDSFLADRYVEGECPRCAYNDARGDQCDKCGNLLDPFELKNPRCKLDGA 189

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   +L   +   E            P   R    S++K GLKD  ++R   
Sbjct: 190 TPVLRNTRHIYLMLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRCITRD-V 248

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P +   + ++YVW +A   Y + T           +  P ++     +GKD + 
Sbjct: 249 KWGVPVPLEGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNVP 307

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  D  R
Sbjct: 308 FHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGDNAQETGVPADVWR 367

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFT 384
           Y+L++      D  ++        N++L   +GNLV+R V ++   K Y+ ++P     T
Sbjct: 368 YYLLKNRPETGDTQFEWRSFVDANNSELLAKLGNLVNRMVKLVASPKAYNSIVPD-FTVT 426

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
           E  +  L   + +L++    M++  +   +   + +V   +    + K    L    P+R
Sbjct: 427 EPFKPALEEITTLLRQYITEMESVHLRSGVGTAMKIVEAGNGLIQSNKLDNSLIANEPER 486

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-------DENRCFQSLDQRLKPG 496
           A+ V+ + V +I  ++ +   ++P  +  I + L V        D+ +      + +KPG
Sbjct: 487 AAAVVGIVVNLIYLISSIFSPYLPATSASILEQLNVPFTNIPSLDDLKDEGWEPELIKPG 546

Query: 497 FMLHK 501
             + K
Sbjct: 547 HKIGK 551


>gi|110799452|ref|YP_697210.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209761|ref|ZP_02635386.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|110674099|gb|ABG83086.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170712061|gb|EDT24243.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 514

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 118/491 (24%), Positives = 220/491 (44%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H +  + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEEQVKYIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPIEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 KVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGN  +R ++ I K+++G I          ++I+    R    +    +       + ++
Sbjct: 355 IGNFTNRVLTFIKKNFNGEI-KGEELPLQWKNIIR---RTYASVGNKFEEGEFKSGVKEI 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDIKWSFKE 481


>gi|326474779|gb|EGD98788.1| methionyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326484274|gb|EGE08284.1| methionyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 650

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 107/543 (19%), Positives = 215/543 (39%), Gaps = 45/543 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV +R+++  G   L+  GTDE+G     
Sbjct: 11  QGKRNILITSALPYVNNVPHLGNIVGSVLSADVFSRYNKACGRPTLYVCGTDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++    +I +D F RT  K H +  + ++K++ + G + 
Sbjct: 71  KALEEGVTPEGLCSKYNKIHQEVYSWFNIGFDIFGRTPTKAHTEISQSIFKRLYEHGYLE 130

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++              Y  A G   +   + +   +           
Sbjct: 131 EKTTEQPFCEKHDSFLADRFVEGECPRCHYDDARGDQCDKCQHLLDPFDLINPRCKVDGA 190

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GL+   ++R   
Sbjct: 191 TPIRRKTKHIFLLLDKLQPEIENWATAAFEKGDWPKNSRVITGSWLKEGLQPRGITRD-L 249

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T      +  K    P ++     +GKD + 
Sbjct: 250 KWGVPVPLDGFERKVLYVWFEACIGYPSITA-NYTSEWEKWWRNPEEVQLYQFLGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FHA+ +P   L           + +  ++ ++G K SKS G  +      E  V  D  R
Sbjct: 309 FHAVIFPGCQLGTKDKWTMLHHLSTTEYLNYEGGKFSKSRGIGVFGNNAKETGVSSDVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V ++          P    +E
Sbjct: 369 YYLLKNRPETGDTQFEWKSFIDSNNGELLAKLGNLVNRVVKLVASPKAYSSVIPEFTVSE 428

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
                L   + +L++    M+   +   +   + +    +    A K    L    P+RA
Sbjct: 429 PFYPALEEVTSLLRQYINEMEGVHLRAGIVTAMKIAEAGNGLIQANKLDNSLIANEPERA 488

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD------ENRCFQSLDQRLKPGFM 498
           + V+ + V +I   + +   ++P  +  I + L          ++         +KPG  
Sbjct: 489 AAVVGIVVNLIHLCSSVFCPYLPTTSASILEQLNAPAGLIPSLDDIKDGWKPTAIKPGHR 548

Query: 499 LHK 501
           + K
Sbjct: 549 VGK 551


>gi|212545893|ref|XP_002153100.1| methionyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210064620|gb|EEA18715.1| methionyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 677

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 123/575 (21%), Positives = 217/575 (37%), Gaps = 81/575 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+    ++ ADV AR++R  G   L+  G+DE+G      A 
Sbjct: 14  RNILITSALPYVNNVPHLGNIIGSVLPADVFARYNRARGFPTLYICGSDEYGTATETKAL 73

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV+ +    +     + + D  +I +D F RT         + +++ + + G I +  
Sbjct: 74  EEGVSPEELCAKYHTIHKGIYDWFNIEFDIFGRTPTAHQTKIVQDVFRGLWENGYIEERE 133

Query: 124 YSGWYSLRDEA--YYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFFRLSAY- 172
            +  Y   +    +  D  V          GA G   +   N +  +E +          
Sbjct: 134 TTQPYCPVEGHATFLADRFVEGECSICGDPGARGDQCDKCGNLLDPLEPDAKEGGEEGEE 193

Query: 173 ------QDKLLSYYESHPEFILPIERRNEVI----------------------------- 197
                     L       +   P +R+ + +                             
Sbjct: 194 QDVEARATGWLINPRCKLDGATPEKRKTKHLYLRLDALKDKIVPWFEKVSKENDWSINTS 253

Query: 198 ----SFVKSGLKDLSLSRKTFDWGIKIPDD---------PQYIMYVWIDALTNYLTTTGY 244
               S++  GLK  +++R    WG+ IP              + YVW DA   Y++ T  
Sbjct: 254 SIVQSWIDRGLKPRAITRD-IKWGVPIPTGIEGLDEEAYKNKVFYVWFDACIGYVSITAN 312

Query: 245 LDNPDGSKAKFW------PADL---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSH 293
             + D  + K W      P  +     +GKD + FH+I +P   L + +      K+ + 
Sbjct: 313 YTDGDNLEGKKWEQWWKHPEQVSLFQFMGKDNVPFHSIIFPGSQLGSGMKWTQVHKISAT 372

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
            ++ ++G K SKS G  +      +  VG D  R++L+       D  +  D      N 
Sbjct: 373 EYLNYEGGKFSKSKGVGVFGTSAKDTGVGPDIWRFYLLSRRPESSDTEFKWDEFVSTNNN 432

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV----CSRVLQEIRENMQNQ 408
           +L   +GNLV+R     +   DG +P      E+ +++L+      +  L      M   
Sbjct: 433 ELLKNLGNLVARVTKFCIAKMDGTVPAYSE--EAAKAVLTEHERQVNSYLTSYITFMDAT 490

Query: 409 LIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            +  AL  ++ + S  ++     K    L    PDR + V+ + +  I  LA LL  F+P
Sbjct: 491 KMRPALNDIMHISSLGNKLLQDNKLDNRLFTEEPDRCAAVINIALNHIHLLASLLSPFMP 550

Query: 468 KLANKIFDILFVADENRCFQSL-DQRLKPGFMLHK 501
             +  IF+ L    E R         LKPG  L +
Sbjct: 551 ATSKSIFEQLGAQPEARIPDKWVSDVLKPGHKLGE 585


>gi|224534740|ref|ZP_03675312.1| methionine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513988|gb|EEF84310.1| methionine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 724

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 110/539 (20%), Positives = 223/539 (41%), Gaps = 40/539 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   ++ A+ Y N  PH+G+  +++ AD  AR+ ++ G+  L+  GTDE+G      A 
Sbjct: 2   KKMNLVTAALPYVNNIPHLGNLVQVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKAL 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
                     ++     + +    +I +D F RTT K H +  +  + K+   G I +  
Sbjct: 62  IEKTAPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQEIVQNFFLKLEKNGYIKERE 121

Query: 124 YSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEG------YFF 167
              ++  +D  +  D  V           KG   +  +   NP+  +  +          
Sbjct: 122 TEQFFCNKDSIFLADRYVIGECPECQSTAKGDQCENCSKLLNPIDLINPKCIICKNKPIL 181

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDWGI 218
           + + +    L   ++  E  +     N+  +         F++ GLK+ +++R    WGI
Sbjct: 182 KKTNHLYIDLPKIKTKLEKWIKNSTTNKNWNTNALKMTNAFLRDGLKERAITRD-LKWGI 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFHAIY 274
            +P       + YVW DAL  Y++ T  +     S  K       +  IGKD + FH I 
Sbjct: 241 PVPKKGYENKVFYVWFDALIGYISITKNIVKNWESWWKNNEQVNLVQFIGKDNILFHTII 300

Query: 275 WPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVR 331
           +P   + +        ++ S  ++ ++  K SKS G  I   + +   +  D  R+++  
Sbjct: 301 FPCIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAISTGIPSDVWRFYIYY 360

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +    L +RVN +L +   NLV+R ++   K +  ++ T     +  + I 
Sbjct: 361 NRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKKFFGDILETIEIQHKFWKQIT 420

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++L       +   +  AL +++ + S  ++ F   +PW+ K + P     ++   
Sbjct: 421 PKYNKIL----NLFKKTELKSALKEILQISSFGNKIFQDNEPWKKKDSAPQETKELILNL 476

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +IR L+IL+  F+P+ + KI         +  F +     K G    +  + +F + 
Sbjct: 477 IYLIRDLSILMMPFIPETSKKIQKFFG---NSYQFSTKILGTKSGIKKIEFVEILFNKL 532


>gi|325095468|gb|EGC48778.1| methionyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 637

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 112/544 (20%), Positives = 224/544 (41%), Gaps = 49/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   L+  GTDE+G     
Sbjct: 11  KGQRNILITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLYICGTDEYGTATET 67

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G + 
Sbjct: 68  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFLE 127

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++  D  V        Y  A G   +   + +   + +         
Sbjct: 128 EKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDGA 187

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 188 TPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 246

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD + 
Sbjct: 247 KWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNVP 305

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  D  R
Sbjct: 306 FHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPADVWR 365

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 366 YYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPDFTVPE 425

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
             + +L   + +L++    M+   +   +A  + +V   +    + K    L  + P+RA
Sbjct: 426 PFKPVLGEVTTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLIASEPERA 485

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-------DENRCFQSLDQRLKPGF 497
           ++V+ + + +I  ++ +   ++P  +  I + L V        DE +        +KPG 
Sbjct: 486 ASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFANIPSLDELKDEGWKPALIKPGH 545

Query: 498 MLHK 501
            + K
Sbjct: 546 QIGK 549


>gi|168217640|ref|ZP_02643265.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380323|gb|EDT77802.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 514

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 116/491 (23%), Positives = 219/491 (44%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPVEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 IVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +GN  +R ++ I K+++G I          ++++    R    +    +       + ++
Sbjct: 355 LGNFTNRVLTFIKKNFNGEI-KGEELPLQWKNLIR---RTYASVGNKFEEGEFKSGVKEI 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDIKWSFKE 481


>gi|294813511|ref|ZP_06772154.1| Methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326110|gb|EFG07753.1| Methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 579

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 128/557 (22%), Positives = 227/557 (40%), Gaps = 55/557 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ AD  +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 8   RHLITSALPYINGIKHLGNMVGSMLPADAYSRYLRQRGHDVLYICATDEHGTPAELAAKE 67

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++   F  Q     + + D  ++++D F R++ +++ +  +   +K+ + G I +   
Sbjct: 68  AGLSVAEFCAQAHVAQKAVYDGFELAFDYFGRSSSQQNSEITQHFARKLHENGFIEERAI 127

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        Y G D    +   N                       +
Sbjct: 128 RQVYSPADGRFLPDRYVVGTCPYCGYDKARGDQCENCTRVLDPTDLVNPRSAISGSTDLE 187

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  + +S      P    +    ++  GL D +++R   DWGI
Sbjct: 188 VRETKHLFLLQSKLQREVEEWIDS-VSAQWPQLSTSIARKWLTEGLHDRAITRD-LDWGI 245

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN------PDGSKAKFWPADL----- 260
            +P D          + YVW DA   Y+  T    +          K+ ++ AD      
Sbjct: 246 PVPADTWPDLAAEGKVFYVWFDAPIEYIAATKEWSDAAPDGETRDWKSWWYEADDTVHYS 305

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             + KD + FH + +PA  L    P  K   V    ++ + G K S S    +     +E
Sbjct: 306 QFMAKDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTYYGGKFSTSQKRGVFTDAALE 365

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P
Sbjct: 366 TLPGDYWRYFLLANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVP 425

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 E++  +    +R+L E  E+M+     +A A + +L S  + Y + + PW   K
Sbjct: 426 EGNHAGEAEAKLGEELARLLAEYEEHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEIK 485

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RL 493
           T+PD A+  L   + +I   AI+ + F+P  A  +     +  +   + + +Q      +
Sbjct: 486 TDPDGAALTLRTAMNLIHLYAIVSEPFIPATAAVMRGAFALEGDTATWVTAEQAKALSAV 545

Query: 494 KPGFMLHKTFDPIFPRF 510
             G         +F + 
Sbjct: 546 PAGTAFTVPP-VLFAKI 561


>gi|182624277|ref|ZP_02952062.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910495|gb|EDT72868.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 514

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 116/491 (23%), Positives = 219/491 (44%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  +   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPVLNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S+D F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPVEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 IVIEEKGQSLEEYWNNEESRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGN  +R ++ I K+++G I          ++I+    R    +    +       + ++
Sbjct: 355 IGNFTNRVLTFIKKNFNGEI-KGEELPLQWKNIIR---RTYASVGNKFEEGEFKSGVKEM 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +F+  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFNKNKPWILINNNKKKCEEVLYICAQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDTKWSFEE 481


>gi|86157740|ref|YP_464525.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774251|gb|ABC81088.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 694

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 125/545 (22%), Positives = 204/545 (37%), Gaps = 51/545 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   H+GH  E +  DV  RF R  G DV +    D HG  I   A  
Sbjct: 3   QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDDVAYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FV++             + +  +  T    +      ++  +  KG +YK   
Sbjct: 63  VGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLVYKKSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
              Y   D  +  D  V             G   ++    ++P +  +            
Sbjct: 123 EQLYCETDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCAICRSAPVV 182

Query: 168 RLSAYQDKLLSYYESHPEFILP-------IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           R S +    L   + +                  E +    + L+D  ++R    +G  +
Sbjct: 183 RASDHAYVNLRKPDVNAVIHEWVNAEGHLEPAVREQVKGWLADLQDWCITRDAPYFGFPV 242

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDN---------PDGSKAKFW-----PADL-HVI 263
            D   P   +YVW+DA   YL++  +                  + +     PA L H I
Sbjct: 243 TDPEFPGKFLYVWVDAPIGYLSSAEHFFAAEAPEGARLAPAEFERRYLAVDSPARLEHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGV 322
           GKDILRFHA++WPA L +A L  P ++  HG +   GEK+SKS G  +         +  
Sbjct: 303 GKDILRFHAVFWPAMLWAAGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLDSGLDP 362

Query: 323 DALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRYF    +     D     D  + R+NADLAN + NL SR  +++           G
Sbjct: 363 ELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASRVAALL------QRLPGG 416

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                D  I +     ++  R   Q       +  V    S  +R     KPWE      
Sbjct: 417 VTAALDPEIAAATREAVKGARGAYQALEYRDVVRLVSQAASVCNRRVQETKPWEDPAGEA 476

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R  +VLY T + +  LA +L   +P+ + ++       +       LD        + +
Sbjct: 477 ER--SVLYTTGKALLGLARVLAPILPQFSARLSAAYGRPELPAWTADLDPFDGAPVQVVE 534

Query: 502 TFDPI 506
               I
Sbjct: 535 KPPQI 539


>gi|149238235|ref|XP_001524994.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
 gi|146451591|gb|EDK45847.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
          Length = 608

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 174/560 (31%), Positives = 267/560 (47%), Gaps = 76/560 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLF-TTGTDEHGQKIAK 60
           +  + LY++T I Y NA PHIGH Y M+IAD   ++ +LD     +  TGTDEHG KI  
Sbjct: 16  QSTKPLYVTTPIFYVNAAPHIGHLYSMLIADTRCKWEKLDPKKSSYMLTGTDEHGLKIQV 75

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA   G+  K  VD+ S NF+D+    D++YD FIRTT+  H    +  WK + +KG IY
Sbjct: 76  AAAKQGIDPKQLVDKVSGNFKDLCANSDVTYDRFIRTTDDDHVKVTKYFWKLMEEKGYIY 135

Query: 121 KGCYSGWYSLRDEAYYNDDEV----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           KG +SGWY + DE +Y +  +      G   +      N V + EE  YFF+LSA+QD+L
Sbjct: 136 KGSHSGWYCVSDETFYPETAIEEVERDGKIIKISTETKNEVVFEEETNYFFKLSAFQDQL 195

Query: 177 LSYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           + + + +P +I P  R + +++  + S L+DLS+SR      W I +P+D    +YVW D
Sbjct: 196 IQFLKENPNWIKPKHRYDFIMNELLNSPLEDLSISRPASRLSWSIAVPNDESQKIYVWFD 255

Query: 234 ALTNYLTTTGYLDNPDGS-------------------------------------KAKFW 256
           AL NYLT TG+                                                W
Sbjct: 256 ALLNYLTATGFPKQFQSDGVTKVGTSNNNGGSNNNENNENNENNENISSQSFQTPPLNIW 315

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PA  H+IGKDI+RFH IYWP FL++A + LPK+V  H   L  G K+SKSLGNVI P ++
Sbjct: 316 PA-THIIGKDIIRFHCIYWPIFLIAAGIELPKEVIVHSHWLSDGVKMSKSLGNVIKPKDI 374

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDG 375
           ++  G+D +R+F +       D  Y  + L  +    L N   NL++R  S         
Sbjct: 375 LDYYGIDPVRFFFMENSNISDDCKYSDE-LIHQSRGLLINKYCNLINRISSTRFDIRGGV 433

Query: 376 MIPTPGAFTESDE---------------SILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            +   G F + +E               S++S  +++   + + ++    +RA+    S 
Sbjct: 434 EMYHQGKFEDINEFVKQEAGNEVAAEIQSLISNLNQLYSVMNDEIKEYRYNRAIQAWWSA 493

Query: 421 VSEVDRYFDAQKPWEL-----KKTNPDRASTVLYVTV--------EVIRQLAILLQAFVP 467
           +++ ++ F    PW        +  P          +        E +R  +IL+Q  + 
Sbjct: 494 INQANQIFQLSHPWSYVSAIADEQTPQETRESYQKLINYYTFICSECVRIASILIQPVMH 553

Query: 468 KLANKIFDILFVADENRCFQ 487
           +L+  I D + V    R  +
Sbjct: 554 ELSGIILDRMNVDKTKRTSE 573


>gi|33519922|ref|NP_878754.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|68565996|sp|Q7VRX4|SYM_BLOFL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33504268|emb|CAD83160.1| methionyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 545

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 127/540 (23%), Positives = 226/540 (41%), Gaps = 43/540 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+   +V F    D HG  I   ++ 
Sbjct: 4   KKILVTCALPYANGPLHIGHMLEHIQADIWVRYQRMKNNEVYFICADDAHGTAIMLKSKQ 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +  ++ + +  +         +ISY+++  T  + +++    ++ K+   G I     
Sbjct: 64  LNINPEIMIAKIQQEHYQDCCDFNISYNNYHSTHSEENYELLNSIYTKLKKSGFIKSRFI 123

Query: 125 SGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEGYFF 167
           S  Y  ++  +  D               +G   +            NP   +  +    
Sbjct: 124 SQLYDAQNNIFLPDRFIIGTCPKCRAHNQNGDNCDQCGAIYTPLDLINPKSAISGKSPII 183

Query: 168 RLSAYQDKLLSY-----YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + S +    L       Y      +L  E  ++V  + K GLK+  +SR    +G KIP+
Sbjct: 184 KKSKHLFFDLPQFTKSLYTWIHSGVLQEETLHKVKEWFKLGLKEWDISRNEPYFGFKIPN 243

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAIYW 275
                 YVW+DA   Y+ T   L   + +     FW  +      H IGKDI  FH+++W
Sbjct: 244 TSSKYFYVWMDAPIGYMGTFKNLCKKNKNILFEDFWSINSKVELYHFIGKDITYFHSLFW 303

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           PA L S     P  +F HG +   G KISKS  N I+    +  +  D LRY+   +++ 
Sbjct: 304 PAILESCQYRKPTGIFVHGHVTLNGSKISKSKNNFINVRTYLSHLNSDYLRYYYATKLSS 363

Query: 336 -GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
              D   + +    +VNAD+ N I NL SR+ + I +   G +      +  + ++    
Sbjct: 364 KINDIDLNFNDFMLKVNADIINKILNLASRNSNFITQYNYGYLSN----SLENSNLYDFF 419

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
                 I +  Q +    A+ +++ L  + ++Y D Q PW + K     N + A  +  +
Sbjct: 420 IDAQYLIGKLFQQREFSEAMRKIMQLADKANQYIDKQAPWHIVKQHGIHNKNIALCIFSM 479

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +++ R L I L+  +P L+      L        + +++  L     ++K FD IF R 
Sbjct: 480 GIQLFRVLVIYLKPVLPILSQYSEKFLNT---RLSWNNINIPLT-NHKINK-FDIIFHRI 534


>gi|156538451|ref|XP_001606422.1| PREDICTED: similar to GH13807p [Nasonia vitripennis]
          Length = 522

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 161/493 (32%), Positives = 252/493 (51%), Gaps = 28/493 (5%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G   +  TGTDEHG K+ +AA++  V T  +    S+ FRDM D  D+ Y  FIRTT+  
Sbjct: 30  GHVTVLNTGTDEHGNKVQQAAKSFNVPTDQYCKITSQKFRDMCDTFDVDYATFIRTTDPA 89

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN-----DDEVYKGADGQYYNAQHNP 156
           H +T +  W+ + ++  IYKG Y+GWY + +EA+ +     + +   G   +      + 
Sbjct: 90  HQETVQNFWRLLEERNHIYKGKYAGWYCVSEEAFLSNQDLIEKKTASGETIRVSAESGHV 149

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTF 214
           V+W EEE Y FRLSA+QD  L ++    + + P      ++ +V+ G  + DLS+SR   
Sbjct: 150 VEWAEEENYKFRLSAFQD-DLKHWLKDEKVVQPSTFHKILLQWVEEGSCMADLSISRPAN 208

Query: 215 --DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
              WGI  P DP   +YVW+DAL NYLT  GY D         WP  + VIGKDIL+FH 
Sbjct: 209 RSPWGIPTPSDPNQTIYVWLDALVNYLTALGYPDQKFKEF---WPPTVQVIGKDILKFHG 265

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWPAFL++A L  PK +F H      GEK+SKS GNV+ P +  ++   + LRYFL+R+
Sbjct: 266 IYWPAFLIAAGLEPPKTLFCHSHWTVDGEKMSKSRGNVVSPFDAAQQFTTEGLRYFLLRD 325

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDE 388
                D  Y  + +   +N++LA+ +GNLVSR    ++     +           +E  E
Sbjct: 326 SVPHNDSNYSTERVLNILNSELADTLGNLVSRCTGKVVNPKSEIPSAAIYAKELKSEPAE 385

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-----R 443
           ++      + +  +++ ++  +H A+  V+S +   +   +  KPW L+K   +      
Sbjct: 386 TLRKSMESLGEITKQHYESFYVHHAIDAVMSTLRSANIMIEHHKPWVLRKEPDNEIAITE 445

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS-----LDQRLKPGF- 497
             +V+ + +E  R  AI L   VPKL+  + D L V +  R ++      L+      F 
Sbjct: 446 LKSVIALALEATRISAIALYPVVPKLSCNLLDFLNVPNNARLWKDTKPKYLESPPSADFE 505

Query: 498 MLHKTFDPIFPRF 510
                   +FP+ 
Sbjct: 506 HFGHKNTILFPKI 518


>gi|225557737|gb|EEH06022.1| methionyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 638

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/544 (20%), Positives = 224/544 (41%), Gaps = 49/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   L+  GTDE+G     
Sbjct: 11  KGQRNILITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLYICGTDEYGTATET 67

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G + 
Sbjct: 68  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFLE 127

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++  D  V        Y  A G   +   + +   + +         
Sbjct: 128 EKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDGA 187

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 188 TPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 246

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD + 
Sbjct: 247 KWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNVP 305

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  D  R
Sbjct: 306 FHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPADVWR 365

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 366 YYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPDFTVPE 425

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
             + +L   + +L++    M+   +   +A  + +V   +    + K    L  + P+RA
Sbjct: 426 PFKPVLGEITTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLIASEPERA 485

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-------DENRCFQSLDQRLKPGF 497
           ++V+ + + +I  ++ +   ++P  +  I + L V        DE +        +KPG 
Sbjct: 486 ASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFANIPSLDELKDGGWKPALIKPGH 545

Query: 498 MLHK 501
            + K
Sbjct: 546 QIGK 549


>gi|168213447|ref|ZP_02639072.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714987|gb|EDT27169.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 514

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 119/491 (24%), Positives = 221/491 (45%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     I  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWIAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S++ F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPIEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 KVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGN  +R ++ I K+++G I          ++I+    R    +    +N  +   + ++
Sbjct: 355 IGNFTNRVLTFIKKNFNGQI-KGEELPLQWKNIIR---RTYASVGNKFENGELKSGVKEM 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDTKWSFEE 481


>gi|154316456|ref|XP_001557549.1| hypothetical protein BC1G_04159 [Botryotinia fuckeliana B05.10]
 gi|150845959|gb|EDN21152.1| hypothetical protein BC1G_04159 [Botryotinia fuckeliana B05.10]
          Length = 642

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 116/548 (21%), Positives = 218/548 (39%), Gaps = 42/548 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G     
Sbjct: 11  KGKNNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATEV 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T K   D+  +  +D+ D  +I +D F RTT ++     + ++ K+   G + 
Sbjct: 71  KALETKQTPKELCDEFHKKHKDVYDWFEIGFDYFGRTTTEQQTIIAQDIFMKLHKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQ----- 158
           +   +  Y  + +++  D           Y  A G   +            NPV      
Sbjct: 131 ERTTTQPYCEKHQSFLADRFVEGTCPKCQYDDARGDQCDKCGSLLDALELINPVCKVDGA 190

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E +  F  L   Q  +  ++     E   P    +   S++K GL+  S++R   
Sbjct: 191 TPIPRETKHIFLLLDKAQPAIEEWFNKSSEEGGWPKNGISITNSWLKQGLQGRSITRD-L 249

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  I +P     ++YVW DA   Y + T           +  P ++     +GKD + 
Sbjct: 250 KWGTPIPLPGYENKVLYVWFDACIGYPSITANYTKDWELWWRD-PENVKLYQFMGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH + +P   L       K   + +  ++ ++  K SKS G  +      +  V     R
Sbjct: 309 FHTVIFPGSQLGTGDKWTKLNHLSTTEYLNYENGKFSKSRGVGVFGDTAKDTGVPPSVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           Y+L+       D  ++     +  N+ L N +GN V+R V  +    DG+IP      + 
Sbjct: 369 YYLLSNRPETADSQFEWANFIQLNNSVLLNNLGNFVNRVVKFVNAKMDGVIPEFSPEYKD 428

Query: 387 DE----SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           ++    + +   +  L++   +M+   I   L QV+ + +  +     +        +P+
Sbjct: 429 EKFDAPAFIEEINAQLKDYNSDMEAVKIRVGLDQVMKISTSGNNLLQYRLDNANLAEHPE 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           R  TV+ + + +   +A +   F+P  +  I   L     +   +     LK G  + K 
Sbjct: 489 RTHTVIGLALNLAYLIASITSPFMPSTSESIVSQLSAPLISIPDKWNPAVLKSGHKIGKP 548

Query: 503 FDPIFPRF 510
              +F R 
Sbjct: 549 AY-LFTRI 555


>gi|197122949|ref|YP_002134900.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196172798|gb|ACG73771.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 694

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/545 (22%), Positives = 200/545 (36%), Gaps = 51/545 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   H+GH  E +  DV  RF R  G +V +    D HG  I   A  
Sbjct: 3   QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDEVAYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FV++             + +  +  T    +      ++  +  KG IYK   
Sbjct: 63  VGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLIYKKSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLSA-- 171
              Y   D  +  D  V             G   ++    ++P +  +      R S   
Sbjct: 123 EQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCAICRSSPVV 182

Query: 172 ----YQDKLLSYYESHPEFILP-------IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +    L   + +                  E +    + L+D  ++R    +G  +
Sbjct: 183 RASDHAYVNLHKPDVNAVIHEWVNAEGHLEPAVREQVKGWLADLQDWCITRDAPYFGFPV 242

Query: 221 PDD--PQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPADL--------------HVI 263
            D   P   +YVW+DA   Y  +   Y         +  PA+               H I
Sbjct: 243 TDPEFPGKFLYVWVDAPIGYLSSAEHYFAAEAPDGERLAPAEFERRYLAAGAPARLEHFI 302

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGV 322
           GKDILRFHA++WPA L +  L  P ++  HG +   GEK+SKS G  +         +  
Sbjct: 303 GKDILRFHAVFWPAMLWATGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLESGLDP 362

Query: 323 DALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRYF    +     D     D  + R+NADLAN + NL SR  +++           G
Sbjct: 363 ELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASRVAALL------QRLPGG 416

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                D  I +     ++  R   Q       +  V    S  +R     KPWE    + 
Sbjct: 417 VTAPLDPEIAAATREAVKGARAAYQALETRDVVRLVSQAASVCNRRVQETKPWENPAGDA 476

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +R  +VLY T + +  LA +L   +P+ +  +       +       L+        + +
Sbjct: 477 ER--SVLYTTGKALLGLARVLAPILPRFSAALAAAYGRPELPAWTPDLEPFDGAPVQVVE 534

Query: 502 TFDPI 506
               I
Sbjct: 535 KPPQI 539


>gi|318059205|ref|ZP_07977928.1| methionyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318081093|ref|ZP_07988425.1| methionyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 570

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 123/554 (22%), Positives = 223/554 (40%), Gaps = 52/554 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AA  
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    F        + + D   +++D F R++  ++ +  +   +K+++ G I +   
Sbjct: 63  QGVPVAEFCATAHDAQKAVYDGFSLAFDYFGRSSSAQNREITQHFARKLNENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  +         P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQGEVEKWI-DATADSWPQLSSSIARKWLTEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD----LHVI 263
            +P D          + YVW DA   Y+  T             K+ ++ AD       +
Sbjct: 241 PVPADVWPELAAEGKVFYVWFDAPIEYIGATREWAETAPEGRDWKSWWYEADDVRYTEFM 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           GKD + FH++ +PA  +    P  +  F  S  ++ + G K S S    +   + +E + 
Sbjct: 301 GKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQRRGVFTHDALELLP 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  RYF++       D  +  +  +  VN DLA+ +GN V+R +S   K +   +P  G
Sbjct: 361 ADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPEGG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   KT+ 
Sbjct: 421 TAGEAETRLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDQ 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKPG 496
           + A+  L   + +I   A++ + FVP  A  +     +  +   + S  +      +  G
Sbjct: 481 EAAALTLRTAMNLIHLYAVVSEPFVPTTAKAMRTAFRLDADKATWTSAGEARSLDAVPAG 540

Query: 497 FMLHKTFDPIFPRF 510
                    +F + 
Sbjct: 541 TPFIVPP-VLFAKL 553


>gi|55378546|ref|YP_136396.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68565966|sp|Q5V1B3|SYM_HALMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55231271|gb|AAV46690.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 717

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/524 (21%), Positives = 207/524 (39%), Gaps = 63/524 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    +  D L+R  R  G    F +G+D HG  +A  A   GV 
Sbjct: 14  VTCGLPYANGDLHVGHLRTYVDGDALSRALRRIGQQTAFVSGSDMHGTPVAVNAAEEGVA 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F       + +     +I +D++  T ++ + +  +   +   +   +++      +
Sbjct: 74  PREFALDFHETYAETFPQFNIEFDNYGHTDDETNVELTQEFVRSWVENDHVHEKEIEVAW 133

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
              ++    D  V            G   +                     NP ++   E
Sbjct: 134 DTEEDQPLPDRYVEGTCPYCGEQARGDECDEGCQRHLEPGEIEAPVSTLTGNPAEYRTRE 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F RL+ +Q+ L  +             +N+   +++  L+DL ++R   DWG+  P+D
Sbjct: 194 HKFLRLADFQEYLQGFL---DRLEGTDNAQNQPREWIEGELQDLCITRD-MDWGVDYPED 249

Query: 224 PQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-------------------PAD- 259
                  ++YVW+DA   Y+ +T       G     W                    AD 
Sbjct: 250 VDGGDELVLYVWVDAPIEYVASTKQYTERVGDDEYDWEAVWKIDSEERHGTEWDDEWADD 309

Query: 260 ----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
               +HVIG+DI++ HA++WPA L  A    P+ + + GF+   G  +S S    +   E
Sbjct: 310 SGEIIHVIGRDIIQHHAVFWPAMLRGAGYNEPRSILATGFVGIDGNALSTSRNRAVWADE 369

Query: 316 V-IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
                   D  RY++        D  +  D  ++RVN +L   +GN + RS+    ++YD
Sbjct: 370 YLDAGFHPDLFRYYIATGAQIDTDVDFSWDRFQERVNGELVGNVGNFIYRSLLFAERNYD 429

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G   TP A    D  +       + +    ++   I       I L +  + Y    +PW
Sbjct: 430 G---TPDAAVSDD--VRGRIEDAIADFEAAVREYDIRELAEIAIELSNYGNEYIQRNEPW 484

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L   +P+ A  V+   V++ + +A+L+Q  +P  A +++  L 
Sbjct: 485 NLVDDDPEEAEQVIRDCVQLTKAVAVLMQPVLPGKAERLWGQLG 528


>gi|302520598|ref|ZP_07272940.1| methionyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302429493|gb|EFL01309.1| methionyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 570

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 123/554 (22%), Positives = 223/554 (40%), Gaps = 52/554 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AA  
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    F        + + D   +++D F R++  ++ +  +   +K+++ G I +   
Sbjct: 63  QGVPVAEFCATAHDAQKAVYDGFSLAFDYFGRSSSAQNREITQHFARKLNENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  +         P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQGEVEKWI-DATADSWPQLSSSIARKWLTEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPAD----LHVI 263
            +P D          + YVW DA   Y+  T             K+ ++ AD       +
Sbjct: 241 PVPADVWPELAAEGKVFYVWFDAPIEYIGATREWAETAPEGRDWKSWWYEADDVRYTEFM 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           GKD + FH++ +PA  +    P  +  F  S  ++ + G K S S    +   + +E + 
Sbjct: 301 GKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQRRGVFTHDALELLP 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  RYF++       D  +  +  +  VN DLA+ +GN V+R +S   K +   +P  G
Sbjct: 361 ADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPEGG 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   KT+ 
Sbjct: 421 TAGEAETRLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTDQ 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLKPG 496
           + A+  L   + +I   A++ + FVP  A  +     +  +   + S  +      +  G
Sbjct: 481 EAAALTLRTAMNLIHLYAVVSEPFVPTTAKAMRTAFRLDADKATWTSAAEARSLDAVPAG 540

Query: 497 FMLHKTFDPIFPRF 510
                    +F + 
Sbjct: 541 TPFIVPP-VLFAKL 553


>gi|261198955|ref|XP_002625879.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239595031|gb|EEQ77612.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|327350782|gb|EGE79639.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 646

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 112/554 (20%), Positives = 227/554 (40%), Gaps = 57/554 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARF---------HRLDGLDVLFTTGT 51
           K    + I++A+ Y N  PH+G+    ++ ADV A +          +  G   L+  GT
Sbjct: 11  KGERNILITSALPYVNNVPHLGNIVGSVLSADVFASYVALPYIKAKKKACGRPTLYVCGT 70

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           DE+G      A   GVT +    + ++  R++ +  +I +D F RT   +H +  + ++K
Sbjct: 71  DEYGTTTETKALEEGVTPEELCAKYNKLHREVYEWFEIGFDVFGRTPTAQHTEISQEIFK 130

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ + G + +      +  + +++              Y  A G   +   N +   E +
Sbjct: 131 RLYENGFLTEKTAEHPFCEKHDSFLADRYVEGECPRCAYNDARGDQCDKCGNLLDPFELK 190

Query: 164 GYFF---------RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLK 205
                        R + +   +L   +   E            P   R    S++K GLK
Sbjct: 191 NPRCKLDGATPVLRNTRHIYLMLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLK 250

Query: 206 DLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--- 260
           D  ++R    WG+ +P +   + ++YVW +A   Y + T           +  P ++   
Sbjct: 251 DRCITRD-VKWGVPVPLEGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLY 308

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH++ +P   +       K   + +  ++ ++  K SKS G  +      E
Sbjct: 309 QFLGKDNVPFHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGDNAQE 368

Query: 319 E-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDG 375
             V  D  RY+L++      D  ++        N++L   +GNLV+R V ++   K Y+ 
Sbjct: 369 TGVPADVWRYYLLKNRPETGDTQFEWRSFVDANNSELLAKLGNLVNRMVKLVASPKAYNS 428

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PW 434
           ++P     TE  +  L   + +L++    M++  +   +   + +V   +    + K   
Sbjct: 429 IVPD-FTVTEPFKPALEEITTLLRQYITEMESVHLRSGVGTAMKIVEAGNGLIQSNKLDN 487

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-------DENRCFQ 487
            L    P+RA+ V+ + V +I  ++ +   ++P  +  I + L V        D+ +   
Sbjct: 488 SLIANEPERAAAVVGIVVNLIYLISSIFSPYLPATSASILEQLNVPFTNIPSLDDLKDEG 547

Query: 488 SLDQRLKPGFMLHK 501
              + +KPG  + K
Sbjct: 548 WEPELIKPGHKIGK 561


>gi|257053975|ref|YP_003131808.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692738|gb|ACV13075.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 697

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 118/544 (21%), Positives = 213/544 (39%), Gaps = 56/544 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  DVL R     G    F +G+D HG  IA  A    + 
Sbjct: 14  VTCGLPYANGDLHIGHLRTYVGGDVLTRSLEKLGQQTAFVSGSDMHGTPIAVQAIEDDID 73

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  +    + +     D+ +D++  T ++ + +    + + +   G + +      +
Sbjct: 74  PEAFALEYHEQYEETFPEFDVDFDNYGHTHQETNRELTHEIVEALEAAGYVDEQEIKVAW 133

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
              D+    D  V            G   +                     NP ++ E  
Sbjct: 134 DPEDDQPLPDRYVVGTCPYCGETARGDECDEGCGRHLEPGEIEDPVSKISGNPAEYRERT 193

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-- 221
             FF +S   D L  +             +N+   +++ GL+D  ++R   DWG   P  
Sbjct: 194 HKFFEVSKLADYLSGFL---DRLEGTANAKNQPRQWIEEGLQDWCITRD-MDWGFDYPEV 249

Query: 222 ------DDPQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPAD---LHVIGKDIL 268
                      ++YVW+DA   Y+      T  +       A+ W      +HVIG+DI+
Sbjct: 250 DDTGDDTAEDLVLYVWVDAPIEYIASTKQYTDRVGPEAYDWAETWKESGEIIHVIGRDII 309

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
           + H I+WPA L  A    P+ V + GF+   G+  S S    I   E ++E    D LRY
Sbjct: 310 QHHTIFWPAMLHVAEFNEPRAVVASGFMSLDGDAFSTSRNRAIWAREYLDEGFHPDLLRY 369

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L        D  +  D  ++RVN +L   +GN   RS+    ++Y G      +    D
Sbjct: 370 YLTTVGGFQDDIDFSWDRFRERVNGELVGTVGNFAYRSLLFADRNYGGTPDADLSPDVED 429

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
                     +++    + +  I +A    + L S  + Y    +PW L   + D A+ +
Sbjct: 430 R-----IEDAIEDFEAGVNDYSIRKATQAAVELASFGNEYIQRHEPWNL---DDDEAAPI 481

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK-PGFMLHKTFDPI 506
           +   V++ + +A+LLQ   P  + +++  L   D +    +LD  L+ P     +  + +
Sbjct: 482 IRDCVQIAKAVAVLLQPTTPDTSRRLWAQLD-EDGSIADVTLDAALESPPAEFGEPTE-L 539

Query: 507 FPRF 510
           F + 
Sbjct: 540 FEKI 543


>gi|318604995|emb|CBY26493.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 616

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 118/487 (24%), Positives = 207/487 (42%), Gaps = 47/487 (9%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              AQ  G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G 
Sbjct: 1   MLKAQQLGIEPEEMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYSRLKANGY 60

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------- 158
           I     S  Y      +  D  V             G + +   A ++P +         
Sbjct: 61  IKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSAVS 120

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E E +FF L A+ D L ++  S     L  +  N++  + +SGL+   +SR  
Sbjct: 121 GATPVMRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDA 177

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKD 266
             +G +IPD P    YVW+DA   Y+     L +  G     +FW  D      H IGKD
Sbjct: 178 PYFGFEIPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWRKDSEADLYHFIGKD 237

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LR
Sbjct: 238 IVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKHLDADCLR 297

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +++    D   + +   +RVNAD+ N + NL SR+   I K + G +    A   
Sbjct: 298 YYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGKL----ADHL 353

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
           +D ++    +     I +   N+   +A+ ++++L    +RY D Q PW + K       
Sbjct: 354 ADPALYKTFTDAATSIADTYSNRESSKAIREIMALADIANRYVDEQAPWVVAKEEGRDAD 413

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
              +  + + + R L   L+  +P L  +    L        + S++Q L  G  ++  F
Sbjct: 414 LQAICSMGINLFRVLMTYLKPVLPALTERTEAFLNTE---LTWDSIEQPLL-GHQINA-F 468

Query: 504 DPIFPRF 510
             +F R 
Sbjct: 469 KALFNRI 475


>gi|315056245|ref|XP_003177497.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339343|gb|EFQ98545.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 609

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 108/546 (19%), Positives = 216/546 (39%), Gaps = 48/546 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ + N  PH+G+    ++  D  AR+ R  G++ L+  GTDE+G    
Sbjct: 14  VPGKRNILITSALPFVNNVPHLGNIIGSVLSGDAFARYCRGRGINTLYVGGTDEYGTTTE 73

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+      ++ +  +IS+D F RTT +   D  + ++ K+   G +
Sbjct: 74  AKAFVEKCTPQELCDKYHAIHAEVYEWFNISFDIFGRTTTQLQTDITQDIFLKLEKNGFL 133

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF---- 167
            +   +  Y     ++  D  V        Y  A G   +     ++ ++ +        
Sbjct: 134 KERMTTQLYCQEHHSFLADRFVEGECPVCGYTDARGDQCDLCGQLLESLQLKHPRCKIDG 193

Query: 168 -----RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKT 213
                + + +    L   +S+ E        +   S         ++K GLK  S++R  
Sbjct: 194 SKPITKDTKHIFLELDKLQSNIETFFRDSAASGAWSNNSTVITSAWLKEGLKPRSITRD- 252

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +P   + ++Y W DA   Y++ T    +  G   +  P D+     IGKD +
Sbjct: 253 IRWGTRVPLPGYEEKVIYSWFDACIGYVSITAQYTDQWGKWWRN-PEDVQLYQFIGKDNV 311

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRY 327
            FH+  W              + +  ++ ++G K SKS G  +      +  +  D  R 
Sbjct: 312 VFHSDTWTKLH---------HLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGISADIWRC 362

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTE- 385
            L+       D  +  D      N  L    GN VSR +  +  + Y+ ++P    + E 
Sbjct: 363 CLLSHRPEAGDSEFTWDAFINCNNNLLLKKFGNFVSRVLKFVNSRHYNNIVPNWTEYRED 422

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
           S ++     +++L +  +      I  A + V+ +    + +  + K    L +  P + 
Sbjct: 423 SFDTFKEEINKLLAQYIQEFDAVKIRPAWSTVLQISQLGNGFLQSNKLDNSLAENEPSKC 482

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           + V+ +    +  LA ++  ++P  A  I   L V       +     +KPG  + K+ +
Sbjct: 483 AAVIGIAANTVHLLASIIAPYMPDTAKSINSQLCVDPLPIPDRWNADSIKPGHQIGKS-E 541

Query: 505 PIFPRF 510
            +F R 
Sbjct: 542 HLFSRI 547


>gi|154288292|ref|XP_001544941.1| hypothetical protein HCAG_01988 [Ajellomyces capsulatus NAm1]
 gi|150408582|gb|EDN04123.1| hypothetical protein HCAG_01988 [Ajellomyces capsulatus NAm1]
          Length = 638

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 113/544 (20%), Positives = 224/544 (41%), Gaps = 49/544 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   L+  GTDE+G     
Sbjct: 11  KGQRNILITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLYICGTDEYGTATET 67

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G + 
Sbjct: 68  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFLE 127

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++  D  V        Y  A G   +   + +   + +         
Sbjct: 128 EKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDGA 187

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 188 TPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 246

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD + 
Sbjct: 247 KWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNVP 305

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  D  R
Sbjct: 306 FHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPADVWR 365

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P    TE
Sbjct: 366 YYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSIVPDFTVTE 425

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
               +L   + +L++    M+   +   +A  + +V   +    + K    L  + P+RA
Sbjct: 426 PFTPVLGEITTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLIASEPERA 485

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-------DENRCFQSLDQRLKPGF 497
           ++V+ + + +I  ++ +   ++P  +  I + L V        DE +        +KPG 
Sbjct: 486 ASVVGIVINLIHLISSIFSPYLPATSASILEQLNVPFANIPSLDELKDEGWKPALIKPGH 545

Query: 498 MLHK 501
            + K
Sbjct: 546 QIGK 549


>gi|168205783|ref|ZP_02631788.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662677|gb|EDT15360.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 514

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 118/491 (24%), Positives = 221/491 (45%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S++ F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPIEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 KVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAMLSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGN  +R ++ I K+++G I          ++I+    R    +    +N  +   + ++
Sbjct: 355 IGNFTNRVLTFIKKNFNGQI-KGEELPLQWKNIIR---RTYASVGNKFENGELKSGVKEM 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDTKWSFEE 481


>gi|46190591|ref|ZP_00121331.2| COG0143: Methionyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 595

 Score =  273 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 132/520 (25%), Positives = 220/520 (42%), Gaps = 52/520 (10%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
            +DV AR+ R+ G DVL  +GTDEHG  I   A+  G+T +   ++ +R        L +
Sbjct: 2   PSDVYARYERMKGNDVLMVSGTDEHGTPILVEAEKEGLTAQELANRYNRVIAKDLCDLGL 61

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG-----------WYSLRDEAYYND 138
           SYD F RTT   H    + ++K+  + G IYKG                  +  E     
Sbjct: 62  SYDLFTRTTTGNHEHVVQEMFKQCLENGYIYKGTQQVAISPSTGRTLPDRYIEGECPICH 121

Query: 139 DEVYKGADGQYYNAQ------HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
            E  +G        +       NPV  +  E   F  + +    L       +  L   +
Sbjct: 122 AEGARGDQCDACGNELDPDELINPVSKINGETPRFEQTEHYFLDLPALAEANKAWLETRK 181

Query: 193 -RNEVISFVKSGLKDLSLSR---KTFDWGIKIP-----DDPQYIMYVWIDALTNYLTTTG 243
                +     GL      R   +  DWGI +P     D+P   +YVW DA+  YL+ + 
Sbjct: 182 GWRTNVINFSLGLFKEVKPRAITRDIDWGIPVPVKDWIDNPNKKLYVWFDAVIGYLSASI 241

Query: 244 YLDNPD--GSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN------------- 283
                     K + W  D      + +GKD + FH+  WP+ +L+ N             
Sbjct: 242 EWARRQGDPEKWREWWNDPSCPAYYFMGKDNITFHSQIWPSEMLAYNGKGSKGGETGPMG 301

Query: 284 -LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            L LP++V +  F+  +G+K S S G VI   +++    VDA+RY++        D  + 
Sbjct: 302 PLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKDILARYPVDAVRYYISVAGPESSDSDFT 361

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEI 401
                +  N +LA+  GNLV+R  ++I K++  + P    + T  D  +L   S     +
Sbjct: 362 WAEFVRHNNEELASSWGNLVNRVANLINKNFGEIPPLDEDSMTNEDRGLLEEASAAFDVV 421

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             +++      AL++ + +V ++++Y  A +PW++ K +  R  TVL+V  + +     L
Sbjct: 422 GSSIETHHQKHALSEAMRVVGDINKYISATEPWKI-KDDQARLGTVLHVAAQAVSDANHL 480

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQ---RLKPGFM 498
           L  F+P  A K+++ L           L +     KPGF 
Sbjct: 481 LAPFLPHSAQKVWEALGGTGTFSPLPELKEVEDLDKPGFT 520


>gi|220917741|ref|YP_002493045.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955595|gb|ACL65979.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 694

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 124/547 (22%), Positives = 204/547 (37%), Gaps = 55/547 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++L +++A+ Y N   H+GH  E +  DV  RF R  G DV +    D HG  I   A  
Sbjct: 3   QRLLVTSALPYANGPIHLGHLVEYVQTDVYVRFRRACGDDVAYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T K FV++             + +  +  T    +      ++  +  KG IYK   
Sbjct: 63  VGMTPKAFVEKYRAEQHADFHAFGVEFSTYYTTDSDENRRWAYRVYDALKAKGLIYKKSV 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEGYFFRLS--- 170
              Y   D  +  D  V             G   ++    ++P +  +      R S   
Sbjct: 123 EQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCAICRSSPVV 182

Query: 171 ------------AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                          + ++  + +    + P  R  E +    + L+D  ++R    +G 
Sbjct: 183 RASDHAYVNLRKPDVNAVIHEWVNAEGHLEPAVR--EQVKGWLADLQDWCITRDAPYFGF 240

Query: 219 KIPDD--PQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPADL--------------H 261
            + D   P   +YVW+DA   Y  +   Y         +  PA+               H
Sbjct: 241 PVTDPEFPGKFLYVWVDAPIGYLSSAEHYFAAEAPDGERLAPAEFERRYLAVGAPARLEH 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEV 320
            IGKDILRFHA++WPA L +  L  P ++  HG +   GEK+SKS G  +         +
Sbjct: 301 FIGKDILRFHAVFWPAMLWATGLKRPDRMPVHGHLTVNGEKMSKSRGTFVTGRTYLESGL 360

Query: 321 GVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
             + LRYF    +     D     D  + R+NADLAN + NL SR  +++          
Sbjct: 361 DPELLRYFYAANLGSGVSDLDLSLDEFRNRINADLANNVANLASRVAALL------QRLP 414

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     D  I +     ++  R   Q       +  V    S  +R     KPWE    
Sbjct: 415 GGVTAPLDPEIAAATREAVKGARAAYQVLETRDVVRLVSQAASVCNRRVQETKPWENPAG 474

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + +R  +VLY T + +  LA +L   +P+ +  +       +       L+        +
Sbjct: 475 DAER--SVLYTTGKALLGLARVLAPILPRFSAALAAAYGRPELPAWTPDLEPFDGAPVQV 532

Query: 500 HKTFDPI 506
            +    I
Sbjct: 533 VEKPPQI 539


>gi|18311505|ref|NP_563439.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|18146189|dbj|BAB82229.1| probable methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 514

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 117/491 (23%), Positives = 219/491 (44%), Gaps = 19/491 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K+ I  A  Y N   HIG     +  D+LAR+HR  G +V+F +G+D HG  I   A+  
Sbjct: 2   KVIIGNAWPYANGSLHIGRVSSWMAGDILARYHRAKGDEVIFVSGSDCHGSPILNKAKEI 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  +++  R F    + L  S++ F RT  + H    + + K + +KG IY+    
Sbjct: 62  NKSPEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            +Y  +     ++     G      N  ++ V+       FF+LS +QD + +  +    
Sbjct: 122 EFYCPKCCDTLDE----FGIKEGLCNECNSKVEVRSSNNLFFKLSYFQDYIQNILDEEES 177

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTG 243
           +            +++ GL+D  L+R+  +WGI++P +      +YVWIDAL  Y+T + 
Sbjct: 178 WR--ENAIKITKRYLEGGLRDKILTRE-INWGIEVPIEGFEDKRVYVWIDALLAYVTASK 234

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPK-KVFSHGFIL 297
            +    G   + +  +       V GK+ + FH   +PA L    L   + ++FS  ++ 
Sbjct: 235 KVIEEKGQSLEEYWNNEDSRIYLVHGKENIPFHTTMFPAILSGIGLEKSEIRIFSSQYLT 294

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+  S +    I    ++E   +D++RY+L+   A  K+  +         N +L   
Sbjct: 295 LEGKTFSTNRNWAIWVPYIMERYNIDSIRYYLISRGAEEKNSDFTWRDFINANNNELVGE 354

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           IGN  +R ++ I K++ G I          ++++    R    +    +N      + ++
Sbjct: 355 IGNFTNRVLTFIKKNFSGEI-KGEELPLQWKNLIR---RTYASVGNKFENGEFKSGVKEM 410

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +L+ + + +FD  KPW L   N  +   VLY+  +++  L  L+   +P    KI   L
Sbjct: 411 FNLIKQGNDFFDKNKPWILINNNKKKCEEVLYICSQILVALTDLMNPIIPFTCEKIKMFL 470

Query: 478 FVADENRCFQS 488
            + D    F+ 
Sbjct: 471 GIKDTKWSFKE 481


>gi|156043243|ref|XP_001588178.1| hypothetical protein SS1G_10624 [Sclerotinia sclerotiorum 1980]
 gi|154695012|gb|EDN94750.1| hypothetical protein SS1G_10624 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 646

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/548 (20%), Positives = 212/548 (38%), Gaps = 42/548 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV +R+ +L     L+  GTDE+G     
Sbjct: 11  KGKNNILITSALPYVNNVPHLGNIVGSVLSADVFSRYSKLRDRPTLYICGTDEYGTATEV 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T K   D+  +  +D+ D  +I +D F RTT  +     + ++ K+   G + 
Sbjct: 71  KALETKQTPKELCDEFHKKHKDVYDWFEIGFDYFGRTTTDQQTVIAQDIFMKLHKNGYLE 130

Query: 121 KGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQ----- 158
           +   +  Y    +++  D           Y  A G   +            NPV      
Sbjct: 131 ERTTTQPYCEAHKSFLADRFVEGTCPKCQYDDARGDQCDKCGSLLDALELINPVCKVDGA 190

Query: 159 ---WMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                E +  F  L   Q  +  ++     E   P    +   S++K GL+  S++R   
Sbjct: 191 TPVPRETKHIFLLLDKAQPAIEEWFNKSSEEGGWPKNGISITNSWLKQGLQGRSITRD-L 249

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  I +P   + ++YVW DA   Y + T           +  P ++     +GKD + 
Sbjct: 250 KWGTPIPLPGFEEKVLYVWFDACIGYPSITANYTKDWELWWRN-PENVKLYQFMGKDNVP 308

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH + +P   L       K   + +  ++ ++  K SKS G  +      +  V     R
Sbjct: 309 FHTVIFPGSQLGTGDKWTKLNHLSTTEYLNYENGKFSKSRGVGVFGDTAKDTGVPPSVWR 368

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD----GMIPTPGA 382
           Y+L+       D  ++     +  N+ L N +GN V+R +  +    D       P    
Sbjct: 369 YYLLSNRPETADSQFEWSNFIQLNNSVLLNNLGNFVNRVIKFVNAKMDGVIPEFSPEYKD 428

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            +    + +   +  L++   +M+   I   L QV+ + +  +     +        +P+
Sbjct: 429 ESFDFPAFIEEINVQLKDYNNDMEAVKIRAGLDQVMKISTSGNNLLQYRLDNANLAEHPE 488

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           R  TV+ + + +   +A +   F+P  +  I   L     +   +     LK G  + K 
Sbjct: 489 RTHTVIGLALNLAYLIASITSPFMPSTSESIVAQLSAPLISIPDKWNPAVLKSGHKIGKP 548

Query: 503 FDPIFPRF 510
              +F R 
Sbjct: 549 AY-LFTRI 555


>gi|242006743|ref|XP_002424206.1| methionine-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212507555|gb|EEB11468.1| methionine-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 891

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 99/477 (20%), Positives = 198/477 (41%), Gaps = 42/477 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + I++A+ Y N  PH+G+    ++  DV ARF RL G + L+ +GTDE+G      A  
Sbjct: 249 NILITSALPYVNNVPHLGNIIGCVLSGDVFARFCRLRGYNTLYISGTDEYGTATETKALE 308

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +   D+  +    +     IS+D F RTT  +  + C++++KKI++   I     
Sbjct: 309 EGLTPREICDKYYKIHDAIYKWFGISFDYFGRTTTPQQTEICQLIFKKINENNYIISDVV 368

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                 + + Y  D  V            +G          N  + ++      + +   
Sbjct: 369 EQLLCEKCDRYLADRFVEGVCPRCSYEDARGDQCDGCGHLINAPELIKPRCKMCKQTPVL 428

Query: 174 DKL-------------LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            +              L  +            R    +++  GLK   ++R    WGI +
Sbjct: 429 RQSKQFFLDLPKIEPLLKEWIQQRWLDWSHNAREISKAWLNDGLKPRCITRD-LKWGIPV 487

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-------LHVIGKDILRFH 271
           P +     + YVW DA   Y++             K+W  D          + KD + FH
Sbjct: 488 PLEGFESKVFYVWFDAPIGYISI---TKGYTSEWKKWWMPDKNTKVNLYQFMAKDNVPFH 544

Query: 272 AIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           ++ +PA L+++         +F+  ++ ++  K SKS G  +   +  E  +  D  R++
Sbjct: 545 SVMFPASLIASKENYVTVSNIFATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWRFY 604

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+      +D  +    L  + N++L + +GN ++R++    K +D  IP     T+ + 
Sbjct: 605 LLYVRPESQDSSFSWSDLALKNNSELLSVLGNFINRALMFCEKTFDSKIPNMN-LTDENY 663

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            ++++ +R L E    ++   +   +  ++S+    +++  + +PW L K + D   
Sbjct: 664 ELVALVNRELHEYISVIEKGKLREGIRHLLSIARLGNQFMQSSQPWVLCKGSEDDKK 720


>gi|297669112|ref|XP_002812750.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2
           [Pongo abelii]
          Length = 542

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 153/539 (28%), Positives = 228/539 (42%), Gaps = 107/539 (19%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD---VLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL G       F+TGTDEHG KI +AA
Sbjct: 64  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      DQ S  F+ +     IS+                   ++          
Sbjct: 124 ATAGLAPTELCDQVSEQFQQLFQEAGISF---------------SWTKEENYIFRLSQFR 168

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   +      +  +              +QW++EE     +S     L      
Sbjct: 169 EPLQRWLRGNPQAITPEPFHHVV-----------LQWLDEELPDLSVSRRSSHLHW---- 213

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
                                             GI +P D    +YVW+DAL NYLT  
Sbjct: 214 ----------------------------------GIPVPGDDSQTIYVWLDALVNYLTVI 239

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H      G+K
Sbjct: 240 GY---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVCGQK 296

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G L+
Sbjct: 297 MSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALGGLL 356

Query: 363 SRSVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQ 408
           +R  +  +   +             PG           D +++S  + + +++ ++  N 
Sbjct: 357 NRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQVADHYDNF 416

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAF 465
            I++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    LLQ  
Sbjct: 417 QIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLLQPV 476

Query: 466 VPKLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFDPIFPRF 510
            P LA+K+   L V+   R    L               +RL P   L      +FPR 
Sbjct: 477 TPSLADKLLSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLGPETGL------LFPRL 529


>gi|326777757|ref|ZP_08237022.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658090|gb|EGE42936.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 574

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 123/557 (22%), Positives = 224/557 (40%), Gaps = 55/557 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLVTSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG++   F  Q     + + D  ++++D F R++ +++ +  +   +K+ + G I +   
Sbjct: 63  AGLSVAEFCAQAHDAQKAVYDGFELAFDYFGRSSSQQNVEITQHFARKLHENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  +  +      P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQHEVEEWIAT-VSAEWPHLSTSIARKWLTEGLNDRAVTRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN------PDGSKAKFWPAD-----L 260
            +P D          + YVW DA   Y+  T    +          K+ ++ AD      
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIAATKEWADASADGESRDWKSWWYEADDTVRYT 300

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             + KD + FH + +PA  L    P  K   V    ++   G K S S    +     +E
Sbjct: 301 QFMAKDNVPFHTVMFPATELGVREPWKKVDVVKGFNWLTFYGGKFSTSQKRGVFTDAALE 360

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P
Sbjct: 361 ILPGDYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVP 420

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   K
Sbjct: 421 AGRVAGEAEAKLGEEIARLLGEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIK 480

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RL 493
           T+ D A+  L   + +I   A++ + F+P  A  +     +  +   + + +Q      +
Sbjct: 481 TDADGAALTLRTAMNLIHLYAVVSEPFIPASAAAMRGAFALESDTATWVTAEQAKSLDAV 540

Query: 494 KPGFMLHKTFDPIFPRF 510
             G         +F + 
Sbjct: 541 PAGTAFTVPP-VLFAKI 556


>gi|76801248|ref|YP_326256.1| methionyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121724492|sp|Q3IT47|SYM_NATPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76557113|emb|CAI48687.1| methionine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 698

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/516 (21%), Positives = 206/516 (39%), Gaps = 55/516 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   H+GH    +  D  AR     G  V F +G+D HG  IA  A   GV 
Sbjct: 13  VTCGLPYANGDLHVGHLRTYVSGDAYARALESLGQSVAFVSGSDMHGTPIAVNAAEEGVD 72

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  +    + +     +I +D++  T ++ + +  R   +   D   + +      +
Sbjct: 73  PESFAVEYHEQYEETFPQFNIEFDNYGHTHDETNTEMTRSFVRSWIDDDHVVEKEIEVAW 132

Query: 129 SLRDEAYYNDDEVYKGAD-------GQYYNAQH------------------NPVQWMEEE 163
               +    D  V            G   +                     NP ++    
Sbjct: 133 DAEADQPLPDRFVEGTCPYCGEKARGDECDEGCQRHLEPGEIEAPVSTITGNPAEYRTRP 192

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F RLS +Q+ L  +             +N+   +++  L+DL ++R   DWGI  P D
Sbjct: 193 HKFLRLSDFQEYLRGFI---DRLEGTENAQNQPREWIEGELQDLCITRD-MDWGIDYPAD 248

Query: 224 -----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------------LHVI 263
                   ++YVW+DA   Y+++T       G     W A                +H+I
Sbjct: 249 GDESGEDLVLYVWVDAPIEYVSSTKQYSEQVGRDEYDWEAVWKNQVDGVPPEGGEIVHII 308

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           G DI++ H ++WPA L  A    P+ V + GF+   G+  S S    +   + IE  +  
Sbjct: 309 GHDIIQHHTVFWPAMLRGAGFNEPRAVMACGFVNLDGDAFSTSRNRAVWADDYIESGLHP 368

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  RY ++       D  +  DGL++R N++L   +GN + RS+    ++Y G      +
Sbjct: 369 DLYRYHIITGSEFTADVDFSWDGLQERTNSELVGTLGNFLYRSLLFAERNYGGTPDAAVS 428

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
                + + +     + + R  + +  +       + L +  + Y    +PW+L   +P+
Sbjct: 429 -----DEVRNEIEAAMADFRTAVNDYRVRGLGRAPVELATFGNEYIQRHEPWKLTDDDPE 483

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +A  V+   V++ + +A+L +  +P  A  ++D L 
Sbjct: 484 KARQVIRDCVQIAKAIAVLAEPVLPGKAAALWDQLG 519


>gi|302918143|ref|XP_003052595.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733535|gb|EEU46882.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 666

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 112/574 (19%), Positives = 204/574 (35%), Gaps = 74/574 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +  + I++A+ Y N  PH+G+    ++ ADV AR+ R  G + ++  G+DE+G     
Sbjct: 11  EGKRNILITSALPYVNNIPHLGNIIGSVLSADVFARYCRARGHNTIYICGSDEYGTATET 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G++      +     + + D   I +D F RT   +     + ++  +   G I 
Sbjct: 71  KALEEGLSPADLCAKYHALHKGVYDWFRIDFDIFGRTPTDQQTQIVQQIFSDLWKNGLIE 130

Query: 121 KGCYSGWYS--LRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           +   +  +        +  D             GA G   +A    +   E E       
Sbjct: 131 ERETTQPFCADPAHCKFLADRFVEGECSICHDLGARGDQCDACGGLLDPFEPEREPSNDD 190

Query: 171 A-----YQDKLLSYYESHPEFILPIERRNEVIS--------------------------- 198
                      L       +   P +RR + +                            
Sbjct: 191 DDHVEAKATGWLINPRCKVDGTAPEKRRTKHLYLRLDAIKDLLVPWFHKSSKEGDWSANC 250

Query: 199 ------FVKSGLKDLSLSRKTFDWGIKIPDDPQ---------YIMYVWIDALTNYLTTTG 243
                 ++  GL    ++R    WG+ IP              + YVW DA   Y++ T 
Sbjct: 251 ISITQAWIDKGLLPRGITRD-LKWGVPIPKGLDGLSDEEYAEKVFYVWFDACIGYVSITK 309

Query: 244 YLDNP------DGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFS 292
            L +P      +  K    P ++     +GKD + FH I +PA  L       K  K+ +
Sbjct: 310 NLTDPGNLDGTNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTGENWTKVHKMST 369

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
             ++ ++G K SKS G  +      E  V  D  RY+L+       D  +         N
Sbjct: 370 TEYLNYEGGKFSKSRGVGVFGNTAKETGVDPDVWRYYLLSRRPETADSEFKWPEFIDANN 429

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLI 410
            DL   +GNL  R +       DG++P    +T+   E+     +  LQ          +
Sbjct: 430 NDLLKNLGNLNQRILKFCQAKLDGVVPDYTKYTDERLEAHKKEVNEALQTYITQFDAIKL 489

Query: 411 HRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              LA V+ + +  ++     K    L    PDR + V+ + +  ++ LA ++  ++P  
Sbjct: 490 RAGLATVMHISALGNKLLQDSKLNNQLLAEEPDRCAAVIGLGINHLQLLASIIHPYMPST 549

Query: 470 ANKIFDILFVADENRCFQSLDQRL-KPGFMLHKT 502
              I + +         ++    L KPG  + + 
Sbjct: 550 GEAILEQIGSPGLISIPETWTGDLIKPGQKIGEP 583


>gi|29830946|ref|NP_825580.1| methionyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|68566000|sp|Q82F60|SYM_STRAW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29608059|dbj|BAC72115.1| putative methionyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 574

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 123/558 (22%), Positives = 226/558 (40%), Gaps = 56/558 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    F  Q     + + D  ++++D F R++ +++ +  +   +++++ G I +   
Sbjct: 63  RGLPVDEFCAQAHDAQKAVYDGFELAFDYFGRSSSEQNREITQHFARRLNENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++  +   H E   P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQHEVEEWVARHEE-EWPQLASSIARKWLNEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLH-------- 261
            +P D          + YVW DA   Y+  T    + D      K W  D          
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDLDPENRDWKSWWYDADSGENPVRY 300

Query: 262 --VIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              + KD + FH + +PA  L    P  K   V +  ++ + G K S S    +     +
Sbjct: 301 TEFMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDHAL 360

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +
Sbjct: 361 EILPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKKRFGEEV 420

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P      ES+  +    + +L E   +M+     +A A + +L S  + Y + + PW   
Sbjct: 421 PAGAPAGESETKLGEEIAALLAEYESHMETLQFRKAAAALRALWSAGNSYLEEKAPWLEI 480

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR----- 492
           KTNP+ A+  L   + +I   +++ + F+P  +  +     ++++   + + D+      
Sbjct: 481 KTNPEGAALTLRTAMNLIHLYSVVSEPFIPASSKAMRSAFALSEDTATWVTQDEAKSLDS 540

Query: 493 LKPGFMLHKTFDPIFPRF 510
           +  G         +F + 
Sbjct: 541 VPAGTPFTVPP-VLFAKI 557


>gi|302382698|ref|YP_003818521.1| methionyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193326|gb|ADL00898.1| methionyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 567

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 114/555 (20%), Positives = 218/555 (39%), Gaps = 54/555 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            ++ I++A+ Y N   H+G+ A  M+ ADV ARF R  G +VL+   TDEHG     AA 
Sbjct: 2   PRILITSALPYINGIKHLGNLAGSMLPADVFARFKRGQGHEVLYICATDEHGTPAELAAA 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            AG   + + D+     +       +SYD F R++ + +    +   K +   G I +  
Sbjct: 62  AAGQDVQTYCDEQHEIQKAAGQAFGLSYDWFGRSSREPNRRLTQHFAKVLEANGLIEERV 121

Query: 124 YSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNP---------------------V 157
               YS+ D  +  D        + G  G   +   N                      +
Sbjct: 122 DRMVYSVDDARFLPDRYVEGTCPHCGHVGARGDQCDNCGRLLDPTDLIAPYSAVSGSTNL 181

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +  +    +   +  +D++  + ES  ++      ++  +  +  GL D  ++R    WG
Sbjct: 182 EVRDTRHLYLLQTKIEDRIRGWIESKSDW--QTLAKSIALKHLDEGLIDRGITRD-LKWG 238

Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-----AD----L 260
           + +  D           + YVW DA   Y+  T      +G+  + W      AD    +
Sbjct: 239 VPVVGDDGGPRPGMEGKVFYVWFDAPIEYIGATEEWAEANGTTWRDWWRLDEGADDVRYV 298

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
             +GKD + FH + +PA +L +  P      + +  ++   G K S S    +   + +E
Sbjct: 299 QFMGKDNVAFHTVSFPATILGSGEPWKTVDTLKAFNWLNWYGGKFSTSQKRGVFMDQALE 358

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
            +  D  R+ L      G D  +  +  +   N DLA+ +GN V+R V      +DG++P
Sbjct: 359 ILPADYWRWHLTAYGPEGSDAAFTWEQFQSTTNKDLADVLGNFVNRIVKFAESKFDGVVP 418

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G     +  + +  +  + E     +     +A   + ++    + Y     PW   K
Sbjct: 419 DGGTPGPLEAKLEADVAAGIAEATAAFEAMEFRKACVALRAVWVLGNEYLQEAAPWTAYK 478

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL---KP 495
           T+ +R++  +   + ++   A L    +P  A  I     V + +  + + D+ L    P
Sbjct: 479 TDVERSAVGVRTGLNLVALFARLAAPVLPFTAPTIAAT--VGETDLSWPAADEALLDRLP 536

Query: 496 GFMLHKTFDPIFPRF 510
                 + + +F + 
Sbjct: 537 RGQKVASAEVLFRKI 551


>gi|297264627|ref|XP_002799060.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2
           [Macaca mulatta]
          Length = 522

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 152/537 (28%), Positives = 230/537 (42%), Gaps = 107/537 (19%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD---VLFTTGTDEHGQKIAKAAQN 64
           Y +T I Y NA PHIGH Y  ++AD L+R  RL G       F+TGTDEHG KI +AA  
Sbjct: 46  YFTTPIFYVNAAPHIGHLYSALLADALSRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+      D+ S++F+ +     IS+                   ++            
Sbjct: 106 AGLAPTELCDRVSKHFQQLFQEAGISF---------------SWTKEENYIFRLSQFREP 150

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
              +   +      +  +              +QW++EE     +S     L        
Sbjct: 151 LQRWLRGNPQAITPEPFHHVV-----------LQWLDEELPDLSVSRRSSHLHW------ 193

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
                                           GI +P D    +YVW+DAL NYLT  GY
Sbjct: 194 --------------------------------GIPVPGDDSQTIYVWLDALVNYLTVIGY 221

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
              P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H      G+K+S
Sbjct: 222 ---PNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVCGQKMS 278

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G L++R
Sbjct: 279 KSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALGGLLNR 338

Query: 365 SVSMILKDYD--------GMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQLI 410
             +  +   +             PG           D +++S  + + +++ ++  N  I
Sbjct: 339 CTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSSVATLPKQVADHYDNFQI 398

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVP 467
           ++AL  V S V + + +     PW+L   +P  A    TVL+V +E +R    LLQ   P
Sbjct: 399 YKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVLHVALECLRVFGTLLQPVTP 458

Query: 468 KLANKIFDILFVADENRCFQSL--------------DQRLKPGFMLHKTFDPIFPRF 510
            LA+K+   L V+   R    L               +RL P   L      +FPR 
Sbjct: 459 SLADKLLSRLGVSASERNLGELYFLPRFYGHPCPFEGRRLGPETGL------LFPRL 509


>gi|325967829|ref|YP_004244021.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707032|gb|ADY00519.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 584

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 126/542 (23%), Positives = 227/542 (41%), Gaps = 40/542 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R +  I +A  Y  A PH+G+    ++ ADV  R+ RL G DV+F +G+DEHG  I   A
Sbjct: 14  RRRWVIGSAWPYIYAVPHLGNLIGSVLSADVFVRYLRLKGDDVVFVSGSDEHGTPIEVEA 73

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+  +   D+     + + +  +I +D++ RT    H +  R  + K+ +   I+  
Sbjct: 74  LQLGIRPRELTDRMHEIIKKLFEFWEIGFDNYTRTESPVHREFVREFFMKLYNNSYIFTK 133

Query: 123 CYSGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQWMEEE------GYFFRLSA 171
                Y  +D+ Y  D        Y G D    +   N  + +E +              
Sbjct: 134 EDEVPYCPKDKIYLPDRFIIGTCPYCGYDKARGDQCENCGRLLEPKLLINPRCAICGSKP 193

Query: 172 YQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI- 218
              +   +Y                   LP   +   +  +K GLK  +++R    WGI 
Sbjct: 194 IWVRTAHWYLDLTRLEDRVKKYVEENTALPENAKQMSLGMLKEGLKPRAITRDN-KWGIE 252

Query: 219 -KIPDDPQYIMYVWIDALTNYL--TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
              P      +YVW +A+  Y+  T   + +  +  + K +  D     +  +GKD + F
Sbjct: 253 APFPGADNKTIYVWFEAVLGYISATIEYFRNRGNEDEWKRYWFDPNTRVVFFVGKDNIPF 312

Query: 271 HAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H I  PA L+++  P   P    S  ++L +G+K SKS    I   E +  + VD  R+ 
Sbjct: 313 HVILLPAMLIASGDPYVMPYTTASTEYLLFEGKKFSKSQRIGIWIDEALALMPVDYWRFV 372

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+ +    KD  +        +N+ L + IGN + R ++ I   ++G IP+ G+  + D 
Sbjct: 373 LIYQRPESKDTSFAWHQTLDVINSILNDIIGNFIHRVLTFISTRFNGEIPS-GSLRDIDI 431

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
                     +      +   +  AL + I +    +RY + ++PWEL K N D A  V+
Sbjct: 432 KYRDEALDHFKNSEGYYEKIELRDALLEAIEIARVGNRYLNERQPWELIKGNKDEAGAVI 491

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + +++ L+I L   +PK    ++ +   +  N  ++   +  K G  +     P+F 
Sbjct: 492 LNALHIVKILSIDLWPIMPKSMESLWTMAGFSKLN--WKDAYEPPKSGIRVSN-VRPLFK 548

Query: 509 RF 510
           + 
Sbjct: 549 KI 550


>gi|194324311|ref|ZP_03058085.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321758|gb|EDX19242.1| methionyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 652

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 113/519 (21%), Positives = 211/519 (40%), Gaps = 41/519 (7%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
               I +D+  RF +L G   +F  G+D HG  I   A++ G+T +  V + S       
Sbjct: 1   MLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              +I++D++  T    + +    ++ K+++K  I K   +  Y    + +  D      
Sbjct: 61  TDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY------------E 181
                 E   G   +   A ++P + +         S  Q     ++             
Sbjct: 121 CPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDW 180

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYL- 239
                +L  E  N++  + + GL+   +SR    +G  IP  + Q   YVW+DA   Y+ 
Sbjct: 181 IESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIPGTNEQKFFYVWLDAPMGYIA 240

Query: 240 TTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHG 294
           +   Y +  +     FW  +      H IGKDI+ FHA++WPA L S     P  VF++G
Sbjct: 241 SFKDYCNRNEIDFDDFWGDNSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFANG 300

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNAD 353
           F+   G+K+SKS G  I     ++ +    LRY+   R  +   D   + +    + N+D
Sbjct: 301 FLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNSD 360

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +   + N+ SR    I K +D  +    +    D  + S  S+    I +  + +    A
Sbjct: 361 IVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELESEFSKNHDAITQAFEKREFAHA 416

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           +  +++L  + +++ D  KPW+L K      +   V    + + + L   L+  +P +  
Sbjct: 417 VRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGINMFKVLIAYLKPIIPSIVA 476

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +    L +  +   +    + L     + K F P+  R 
Sbjct: 477 EAERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 511


>gi|326481166|gb|EGE05176.1| methionyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 617

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 110/548 (20%), Positives = 213/548 (38%), Gaps = 41/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ + N  PH+G+    ++  D  AR+ R  G++ L+  GTDE+G    
Sbjct: 14  VPGQRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTE 73

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G +
Sbjct: 74  AKALAEKCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLQKNGFL 133

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-----------------AQHNPVQWMEE 162
            +   +  Y     ++  D  V     G  Y                     NP   ++ 
Sbjct: 134 EERMTTQLYCEEHHSFLADRFVEGECPGCGYADARGDQCDLCGQLLESLQLRNPRCKIDG 193

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R + +    L   ++  E        N            S++K GLK  S++R  
Sbjct: 194 STPVTRDTKHIFLELDKLQAKVEDFFHDSAANGSWSNNGAVITGSWLKEGLKPRSITRD- 252

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +P     ++Y W DA   Y++ T    +      +  P D+     IGKD +
Sbjct: 253 ISWGTRVPLPGYEDKVIYSWFDACIGYVSITARYTDQWERWWRN-PKDVQLYQFIGKDNV 311

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +PA  +           + +  ++ ++G K SKS G  +      +  +  D  
Sbjct: 312 VFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADIW 371

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFT 384
           R FL+       D  +  D      N  L   +GN VSR +  +  + Y+ ++P    + 
Sbjct: 372 RCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIMPNWTQYH 431

Query: 385 E-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
           E S  +     +R+L +    +    I  A + V+ +  + + +    +    L +  P 
Sbjct: 432 ESSFSTFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAENEPA 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           + + V+ +    +  LA L+  ++P  AN I   L         +     +KPG  +   
Sbjct: 492 KCAAVIGIATNTVHLLASLVAPYMPDTANSINAQLRADPLLIPDRWNADSIKPGHEIG-R 550

Query: 503 FDPIFPRF 510
            + +F R 
Sbjct: 551 AEHLFTRI 558


>gi|16082174|ref|NP_394618.1| methionyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|25009396|sp|Q9HJ12|SYM_THEAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10640473|emb|CAC12287.1| probable methionyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 547

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 128/510 (25%), Positives = 224/510 (43%), Gaps = 41/510 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K+ ++ A+ Y N   HIGH A   + ADV  R++RL G  VL+ +G+DE+G  I   A+ 
Sbjct: 5   KILVNCALPYANGPLHIGHIAGAYLGADVFVRYNRLMGNQVLYVSGSDEYGTPITVRAEK 64

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G + K   D          + L IS+D F+RTT   H +  +  + K+ ++G I KG  
Sbjct: 65  EGRSPKEIADIYYEEHLRTFENLGISFDIFMRTTWPEHSENAQDFFIKLLNEGYIEKGTM 124

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG--------- 164
              +  +   +  D  +            +G          +P   ++ +          
Sbjct: 125 IAPFCRKIGRFMPDRYIEGTCPYCHYPKARGDQCDNCGRTLDPQDLIDPKCILSGETPEF 184

Query: 165 ----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +FF      +  L  + S   F  P        +F+  GLK   ++R   DWG+KI
Sbjct: 185 RETEHFFLRLDLLEDRLKSWISSKNFWKP-NVLAYTQNFISGGLKKRPITRD-IDWGVKI 242

Query: 221 PDD--PQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFH 271
           P D      +YVW +AL  Y+T          +    K +  D      + IGKD + FH
Sbjct: 243 PLDGYDSKRIYVWFEALIGYITGAKEYSKRTGNPDLWKEYYMDPEVRNYYFIGKDNIPFH 302

Query: 272 AIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           AI WPA L+      LP  + ++ ++  KG++ SKS G      ++++ V  D LRY++ 
Sbjct: 303 AIIWPAMLMGYGGFNLPYDIPANEYLTFKGQQFSKSRGIGYSVDDLLKAVPADYLRYYVA 362

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
             +    D  +  + L   VN+DL +  GNLV R +S +    D     P     S +  
Sbjct: 363 SILPETGDSDFSLEELVNTVNSDLIDKYGNLVYRILSFM----DRYSINPDPVDVSGDEE 418

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R  +   E++    + R L + + L    + +F+  +PW+  K +  + +  LY+
Sbjct: 419 FKYAQRSFELWSEDLSGVHVKRGLLRWLDLAIYANGFFNRSEPWKTIKNDRQKLNHDLYL 478

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++++   L +++  ++P  A KI+++L + 
Sbjct: 479 SLKITEVLTVMVYPYIPSSAEKIWNMLGIP 508


>gi|321309548|ref|YP_004191877.1| methionyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801392|emb|CBY92038.1| methionyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 519

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 147/521 (28%), Positives = 267/521 (51%), Gaps = 17/521 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +   +YI+T + YP+ +PH+GHA+ +++ADVL   ++  G       GTDEHG+K+  
Sbjct: 1   MAKDRSVYITTPLFYPSDKPHLGHAFTVVLADVLKLSYKQLGYGGYLVVGTDEHGEKMLA 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A    + FV+ N  +F+ + + L I YD F+RT++  H    + ++ ++     I+
Sbjct: 61  AADAAQTPVERFVESNVLHFKSLWETLGIKYDRFVRTSDHAHRALVKQVFLQLLSDNQIF 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              + GWY    E  ++D  + K +         +P+    E+ YF R++++++ L   +
Sbjct: 121 IDEWRGWYCTSCEESFSDRFIGKKSTCPI----GHPLTLRAEKTYFLRVTSFRNWLRREF 176

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY-- 238
           E++ + I P + + E+++   + L DLS++R+  DWGIK+P+D  + +YVW DAL  Y  
Sbjct: 177 EANKDLIYPDKYKTELMNNFINDLDDLSITREGLDWGIKVPEDEDHTIYVWFDALIAYLT 236

Query: 239 -LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
            L    Y      +   +W +     + +IGK++ RFHAIYWP  L +  + L   +  H
Sbjct: 237 ALNFGNYGRTNTTTFKNYWESSKCKVIQIIGKEVCRFHAIYWPIMLKNLKVRLFDNLLVH 296

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           G++L   EK+SKS  NVIDP E++  +  + LR++L R I+   D   + D +    N+ 
Sbjct: 297 GWLLMNNEKMSKSKKNVIDPKEILNLMPREGLRFYLAR-ISILGDANVNVDDIFSVYNSY 355

Query: 354 LANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           L N  GNL+SR   ++ + Y+  +P    P +F E D+  + +   +     + + N  I
Sbjct: 356 LVNTYGNLISRFYGIMGRKYENTLPNQWDPESFIEIDQLNIELDEFLNNGYEKEVLNNTI 415

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
              + +V  +     +  +  K WEL+K +     T++    +++      L   +   A
Sbjct: 416 SPIIEKVFEIFRSAGKLIEKNKAWELEKGDL-LLDTLMVFIYKLLCIGTWFLHPILIDTA 474

Query: 471 NKIFDILFVADENRCFQSL-DQRLKPGFMLHKTFDPIFPRF 510
            K++DIL ++ +    + L  QRL     ++   + +FPR 
Sbjct: 475 PKLYDILNISPKKVGIEYLQQQRLYFKKKINDLPENLFPRI 515


>gi|326470325|gb|EGD94334.1| methionyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 617

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 110/548 (20%), Positives = 213/548 (38%), Gaps = 41/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ + N  PH+G+    ++  D  AR+ R  G++ L+  GTDE+G    
Sbjct: 14  VPGQRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTE 73

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G +
Sbjct: 74  AKALAEKCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLQKNGFL 133

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-----------------AQHNPVQWMEE 162
            +   +  Y     ++  D  V     G  Y                     NP   ++ 
Sbjct: 134 EERMTTQLYCEEHHSFLADRFVEGECPGCGYADARGDQCDLCGQLLESLQLRNPRCTIDG 193

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R + +    L   ++  E        N            S++K GLK  S++R  
Sbjct: 194 STPVTRDTKHIFLELDKLQAKVEDFFHDSAANGSWSNSGAVITGSWLKEGLKPRSITRD- 252

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +P     ++Y W DA   Y++ T    +      +  P D+     IGKD +
Sbjct: 253 ISWGTRVPLPGYEDKVIYSWFDACIGYVSITARYTDQWERWWRN-PKDVQLYQFIGKDNV 311

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +PA  +           + +  ++ ++G K SKS G  +      +  +  D  
Sbjct: 312 VFHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADIW 371

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFT 384
           R FL+       D  +  D      N  L   +GN VSR +  +  + Y+ ++P    + 
Sbjct: 372 RCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIMPNWTQYH 431

Query: 385 E-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
           E S  +     +R+L +    +    I  A + V+ +  + + +    +    L +  P 
Sbjct: 432 ESSFSTFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAENEPS 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           + + V+ +    +  LA L+  ++P  AN I   L         +     +KPG  +   
Sbjct: 492 KCAAVIGIATNTVHLLASLVAPYMPDTANSINAQLRADPLLIPDRWNADSIKPGHEIG-R 550

Query: 503 FDPIFPRF 510
            + +F R 
Sbjct: 551 AEHLFTRI 558


>gi|167010078|ref|ZP_02275009.1| methionyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
          Length = 653

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/520 (21%), Positives = 211/520 (40%), Gaps = 42/520 (8%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
               I +D+  RF +L G   +F  G+D HG  I   A++ G+T +  V + S       
Sbjct: 1   MLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              +I++D++  T    + +    ++ K+++K  I K   +  Y    + +  D      
Sbjct: 61  TDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY------------E 181
                 E   G   +   A ++P + +         S  Q     ++             
Sbjct: 121 CPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDW 180

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYIMYVWIDALTNYL- 239
                +L  E  N++  + + GL+   +SR    +G  IP  + Q   YVW+DA   Y+ 
Sbjct: 181 IESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAIPGTNEQKFFYVWLDAPMGYIA 240

Query: 240 TTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +   Y +  + +   FW          H IGKDI+ FHA++WPA L S     P  VF++
Sbjct: 241 SFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFAN 300

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNA 352
           GF+   G+K+SKS G  I     ++ +    LRY+   R  +   D   + +    + N+
Sbjct: 301 GFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNS 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           D+   + N+ SR    I K +D  +    +    D  + S  S+    I +  + +    
Sbjct: 361 DIVGKVVNIASRCAGFIYKKFDATL----SGEIFDPELESEFSKNHDAITQAFEKREFAH 416

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+  +++L  + +++ D  KPW+L K      +   V    + + + L   L+  +P + 
Sbjct: 417 AVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGINMFKVLIAYLKPIIPSIV 476

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +    L +  +   +    + L     + K F P+  R 
Sbjct: 477 AETERFLNI--QFISWADAPKFL-INHKIDK-FKPLATRI 512


>gi|320167707|gb|EFW44606.1| methionyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 583

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 170/550 (30%), Positives = 255/550 (46%), Gaps = 81/550 (14%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G   +F+TGTDEHG KI +AA   G+T     D+ S  FR++ D+ DI Y DF+RTTE
Sbjct: 1   MLGHQTVFSTGTDEHGMKIQQAAAAEGLTPLELCDRTSTRFRELFDLCDIGYTDFVRTTE 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG---ADGQYYN---AQ 153
           +RH    R +W K++ +  IY G Y+GWYS+ DE +  + +   G    DG         
Sbjct: 61  ERHKAVARAVWTKLASEQLIYLGNYAGWYSVPDETFVPEAQTVAGVRKRDGAPCKLSLES 120

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-----FVKSGLKDLS 208
            + ++W+E+  Y F+L  +++KLL + +S P  + P  R    +         S   DLS
Sbjct: 121 GHELEWVEQPNYKFKLPLFKEKLLQWLDSQPATVAPQNRLAWTVQEVGQMKATSDADDLS 180

Query: 209 LSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF----------- 255
           +SR T    WGI  P+DP ++MYVW+DALTNYLT +    +      K            
Sbjct: 181 VSRLTQYLQWGIPTPNDPSHVMYVWLDALTNYLTVSQVPVHKLSEVKKTGAKPEFPALDG 240

Query: 256 -----WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
                WPAD H+IGKDIL+FHAIYWPAFLL A L  PK+V +HG     G+K+SKS GN 
Sbjct: 241 QVFSAWPADYHIIGKDILKFHAIYWPAFLLGAGLAPPKRVIAHGHWTVNGQKMSKSKGNG 300

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR------ 364
           +DP + +   GVDA+RYFL R+     D  Y    +    N +LA   GNL+SR      
Sbjct: 301 VDPFDRVAVHGVDAVRYFLFRDSQLDSDCDYSDTRVTDLFNGELAAAFGNLLSRVFARAL 360

Query: 365 -------------------------SVSMILKDYDGMIPTPGA----FTESDESILSVCS 395
                                    + + +    DG   T            + +    +
Sbjct: 361 LQPANQPSATLSSSPSSAQTADDLAAWAFVPSKLDGTAWTRSDAIQVLPPIAQELHDKLN 420

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD------------- 442
           ++   + E   +    R +  V+  +   +R F   +PW L KT  +             
Sbjct: 421 QLPSLVHEAYTDAQFARGITAVLFSIQCCNRAFTIVEPWTLAKTIREGALKNEPVNETAL 480

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-DQRLKPGFMLH 500
            +   +LY+T+E +R  ++ L   +P+      + L +  + R  Q +    L  G +L 
Sbjct: 481 TQLRAMLYLTLETLRIASLCLLPVLPRSMTAALNHLSIPADQRLAQHIFSSPLVSGTLLP 540

Query: 501 KTFD--PIFP 508
                  +FP
Sbjct: 541 AAGGSVVVFP 550


>gi|23012796|ref|ZP_00052797.1| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 297

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 131/294 (44%), Positives = 191/294 (64%), Gaps = 4/294 (1%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +P D  +IMYVW+DALTNY+T  GY D      A++WP  +H++GKDI+RFHA+YWPAFL
Sbjct: 1   MPGDDAHIMYVWLDALTNYITAVGYPDTTG-DFARYWPNVIHMVGKDIVRFHAVYWPAFL 59

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++A+LP P++VF+HG+  ++G+KISKS+GNVIDP+ +IE  G+D +RYFL+RE+  G DG
Sbjct: 60  MAADLPAPRRVFAHGWWTNEGQKISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDG 119

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +    +  R+N++LAN  GNLV RS+SMI K+  G+ P     T+ D+ +L     +L 
Sbjct: 120 DFSHRAMMGRMNSELANDYGNLVQRSLSMIGKNCSGVTPAHSPDTDDDKEMLGAAYAMLA 179

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           ++R++M  Q+ H A+  +  ++   + Y D Q PW LKKT+P R  TVL+V  E IR L 
Sbjct: 180 KVRDSMDRQMYHEAIEAIWVVIRAANGYVDKQAPWALKKTDPARMGTVLWVLAETIRCLG 239

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLD--QRLKPGFMLHKTFDPIFPRFL 511
           +L Q F+P  + +I D L V +  R F        LK G  L  T   +FPR++
Sbjct: 240 LLTQPFMPAASARILDQLMVPEAERSFAFFGPAHALKAGITLP-TPQGVFPRYV 292


>gi|295837687|ref|ZP_06824620.1| methionine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695943|gb|EDY42876.1| methionine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 572

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 124/556 (22%), Positives = 224/556 (40%), Gaps = 54/556 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV AR+ R  G +VL+   TDEHG     AA  
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYARYLRQRGHEVLYICATDEHGTPAELAAAA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV    F        + + D   +++D F R++  ++ +T +   +++ + G I +   
Sbjct: 63  QGVPVAEFCATAHDAQKAVYDGFSLAFDHFGRSSSAQNRETTQHFARRLHENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPVDGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q+++  +         P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQEEVERWI-DATADSWPQLSSSIARKWLTEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPA---DLH--- 261
            +P D          + YVW DA   Y+  T    +          K W     D+    
Sbjct: 241 PVPGDVWPELAAEGKVFYVWFDAPIEYIGATREWADEAPEGAGRDWKSWWYEAGDVRYTE 300

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVF--SHGFILHKGEKISKSLGNVIDPIEVIEE 319
            +GKD + FH++ +PA  +    P  +  F  S  ++ + G K S S    +   + +E 
Sbjct: 301 FMGKDNVPFHSVMFPATQIGTREPWKRVDFLKSFNWLNYYGGKFSTSQNRGVFTHDALEL 360

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +  D  RYF++       D  +  +  +  VN DLA+ +GN V+R +S   K +   +P 
Sbjct: 361 LPADYWRYFMMANAPESDDTSFTWEHFQATVNKDLADTLGNFVNRVLSFSRKRFGDAVPE 420

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            GA  E++  +    +R+L E  E M+     +A A + +L S  + Y + + PW   KT
Sbjct: 421 GGAPGEAEAKLGEEIARLLAEYEEQMEALQFRKAAAALRALWSAGNSYLEEKAPWLEIKT 480

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-----RLK 494
           +   A+  L   + +I   A++ + FVP  A  +     +  +   + + D+      + 
Sbjct: 481 DQAAAALTLRTAMNLIHLYAVVSEPFVPTTAKAMRTAFRLDADTAAWVAADEARALDAVP 540

Query: 495 PGFMLHKTFDPIFPRF 510
            G         +F + 
Sbjct: 541 AGTPFIVPP-VLFAKL 555


>gi|27904607|ref|NP_777733.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396632|sp|Q89AX4|SYM_BUCBP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|27904004|gb|AAO26838.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 545

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 123/524 (23%), Positives = 221/524 (42%), Gaps = 38/524 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++++ ++ A  Y N   HIGH  E I AD+  R+ ++ G +V F    D HG  I   +Q
Sbjct: 2   KKRILVTCAFPYANGSLHIGHFLEHIQADIWVRYKKMRGHEVWFICADDAHGTPIMLKSQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +  ++ + F+    ++  +  +  +I+YD++  T    +    + ++  +  KG I    
Sbjct: 62  SLKMSPESFISDIYKDHVNDLEKFNINYDNYYSTHSSENSYFLKKIYHILDKKGLIQTRN 121

Query: 124 YSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQ---------HNPVQWMEEEGYF 166
               +      +  D            K   G +               PV  +      
Sbjct: 122 IFQLFDNTKRVFLPDRFVKGACPICHTKDQYGDHCEVCGSSYSAVELIKPVSMLSGNCPI 181

Query: 167 FRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            + S +    L Y+ES          L      ++  + K GL++  +SR +  +G  IP
Sbjct: 182 LKKSLHFFFNLPYFESMLRSWVMSGVLQASVVKKLDEWFKLGLREWDISRDSPYFGFNIP 241

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHAIY 274
                  YVW+DA   Y++T   L       +   FW  +        IGKDI+ FH+++
Sbjct: 242 GFLDKYFYVWLDAPIGYISTFKNLCTQRNNLNFLDFWKKNSECELYQFIGKDIVYFHSLF 301

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WP+ L ++N   P K+F HG +   G K+SKS G+ I     I+ +  D+LRY+   +++
Sbjct: 302 WPSILEASNFRKPTKIFVHGHVTINGLKLSKSRGDCILAKNWIKNLDSDSLRYYYASKLS 361

Query: 335 C-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D   +      ++N+D+ N I NL SR  S I   ++  + +       D ++   
Sbjct: 362 SKIQDIEVNAKHFLYKINSDVVNKIVNLASRVSSFINIYFNNELSS----RIDDLALYKR 417

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
                  I + ++N   + A++ VISL    + Y D +KPW L K   N +    +    
Sbjct: 418 FVTSSSYIEKMLENCEFNSAISMVISLADIANSYVDNKKPWNLTKNIKNSNTLHDICTTV 477

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
           + + R L   L+  +P LA      L +  E  N C   L+ ++
Sbjct: 478 LNLFRILMTWLKPVMPDLAKNSEKFLNIKLEWANICIPLLNHKI 521


>gi|290958910|ref|YP_003490092.1| methionyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648436|emb|CBG71547.1| putative methionyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 577

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 123/560 (21%), Positives = 227/560 (40%), Gaps = 58/560 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    F  Q     + + D   +++D F R++  ++ +  +   +++ + G I +   
Sbjct: 63  RGLPVDEFCAQAHDAQKAVYDGFALAFDYFGRSSSPQNVEITQHFARRLKENGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIDPRSAISGSTDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++ ++  +H E   P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQHEVEAWVAAHEE-EWPHLSSSIARKWLNEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN------PDGSKAKFWPAD------ 259
            +P D          + YVW DA   Y+  T    +          K+ ++ AD      
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDAAPDGEKRDWKSWWYEADGGDHPV 300

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIE 315
                + KD + FH + +PA  L    P  K   V S  ++ + G K S S    +   +
Sbjct: 301 RYTQFMAKDNVPFHTVMFPATELGIREPWKKVDYVKSFNWLTYYGGKFSTSQKRGVFTDQ 360

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +E +  D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +  
Sbjct: 361 ALEILPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGD 420

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +P   A  E++  +    +R+L E    M+     +A A + +L S  + Y + + PW 
Sbjct: 421 EVPAGAAAGEAETRLGEEIARLLAEYEAQMEALQFRKAAAALRALWSAGNSYLEEKAPWL 480

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR--- 492
             KT+ D A+  L   + +I   +++ + F+P  +  +     + D+   + + ++    
Sbjct: 481 EIKTDQDAAALTLRTAMNLIHLYSVVSEPFIPASSAAMRAAFALKDDTAAWVTAEEARAL 540

Query: 493 --LKPGFMLHKTFDPIFPRF 510
             +  G         +F + 
Sbjct: 541 AFVPAGTPFTVPP-VLFAKL 559


>gi|294503497|ref|YP_003567559.1| methionyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|262361540|gb|ACY58261.1| methionyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365721|gb|ACY62278.1| methionyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294353956|gb|ADE64297.1| methionyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 616

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 115/487 (23%), Positives = 203/487 (41%), Gaps = 47/487 (9%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              AQ  G+  +  + + S+  +       ISYD++  T    + +   +++ ++   G 
Sbjct: 1   MLKAQQMGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANGY 60

Query: 119 IYKGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQ--------- 158
           I     S  Y      +  D  V             G + +   A ++P +         
Sbjct: 61  IKNRTISQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVS 120

Query: 159 -----WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                  E E +FF L A+ D L ++  S     L  +  N++  +  SGL+   ++R  
Sbjct: 121 GATPVMRESEHFFFDLPAFSDMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDITRDA 177

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKD 266
             +G ++PD P    YVW+DA   Y+     L +  G     +FW  D      H IGKD
Sbjct: 178 PYFGFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKD 237

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           I+ FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     ++ +  D LR
Sbjct: 238 IVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKYLDADCLR 297

Query: 327 YFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           Y+   +++    D   + +   +RVNAD+ N + NL SR+   I K + G +        
Sbjct: 298 YYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLADQ----L 353

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDR 443
           +D  +    +     I +   N+   +A+ ++++L    +RY D Q PW + K       
Sbjct: 354 ADPVLYKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDAD 413

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
              +  + + + R L   L+  +P L  +    L        + S++Q L  G  +   F
Sbjct: 414 LHAICSMGINLFRVLMTYLKPVLPSLTERTEAFLNTE---LTWDSIEQPLL-GHSITA-F 468

Query: 504 DPIFPRF 510
             +F R 
Sbjct: 469 KALFNRI 475


>gi|297158890|gb|ADI08602.1| methionyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 589

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 126/555 (22%), Positives = 226/555 (40%), Gaps = 53/555 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV AR+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYARYMRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F  Q     + + D   +++D F R++  ++ +  + + +++   G I +   
Sbjct: 63  AGLPVGEFCAQQHHAQKAVYDGFSLAFDYFGRSSSAQNVEITQTIARELKANGFIEERSI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSNADGRFLPDRYIEGTCPHCGYDKARGDQCENCTRVLDPTDLINPRSAISGSSDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S    ++ ++ + H +   P    +    ++  GL+D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLAGEVAAWVDEHGK-DWPTLASSIARKWLNEGLQDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPADLH-------V 262
            +P D          + YVW DA   Y+  T    +  P     K W  D+         
Sbjct: 241 PVPADTWPDLAAEGKVFYVWFDAPIEYIGATKEWSDLDPANRDWKSWWYDVDQTVRYTEF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + KD + FH + +PA LL       K   V +  ++ + G K S S    +     +E +
Sbjct: 301 MAKDNVPFHTVMFPATLLGTRDAWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDAALELL 360

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 361 PADYWRYFLMANAPESDDTSFTWEHFAATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAG 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  E++  +    +R+L E  E M      +A A + +L S  + Y + + PW   KT+
Sbjct: 421 KAAGEAEARLGEEIARLLAEYEEYMDALQFRKAAAALRALWSAGNSYLEEKAPWLEIKTD 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-----LKP 495
            + A+  L   + +I   A++ + F+P  A  +     +AD+   +   ++      +  
Sbjct: 481 QEGAALTLRTAMNLIHLYAVVSEPFIPASARAMRSAFALADDTAPWVGQEEAKALASVPA 540

Query: 496 GFMLHKTFDPIFPRF 510
           G         +F + 
Sbjct: 541 GTAFTVPP-VLFAKI 554


>gi|298345592|ref|YP_003718279.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298235653|gb|ADI66785.1| methionine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 570

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 133/504 (26%), Positives = 223/504 (44%), Gaps = 52/504 (10%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
            R+ G DVL  +GTDEHG  I  AA+ AG+T +   ++N+R   +    L +SYD F RT
Sbjct: 1   MRMRGHDVLMVSGTDEHGTPILVAAEAAGLTPRELANRNNRAIVEDLCQLGLSYDLFTRT 60

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSG-----------WYSLRDEAYYNDDEVYKGAD 146
           T   H+DT R ++K + D G +      G              +         E  +G  
Sbjct: 61  TTGNHYDTVRAMFKVVRDNGYMKVQTTRGAISPSTGRTLPDRYIEGTCPICGAEGARGDQ 120

Query: 147 GQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
                 Q +P               +++E + YF  L A    L  + +   +       
Sbjct: 121 CDACGNQLDPTDLIRPRSKINGETPEFVETDHYFLDLPALARALNEWLDDREKNGNWRPN 180

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKI--PDDPQYIMYVWIDALTNY---LTTTGYLDN 247
             +        +K  +++R   DWGI I   +D    +YVW DA+  Y            
Sbjct: 181 VIKFSKNFLKDIKPRAMTRD-IDWGIPIPGWEDQPKRLYVWFDAVIGYLSASIEWARRFG 239

Query: 248 PDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN--------------LPLPK 288
                 + W  +      + +GKD + FH+  WPA +L  N              L LP 
Sbjct: 240 QSPEGWRQWWNNPESLSYYFMGKDNIVFHSQIWPAEMLGYNGRGDFGGKPGDLGVLNLPT 299

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +V S  F+  +G+K + S G VI   +++    VDALRYF+       +D  +      +
Sbjct: 300 EVVSSEFLTMEGKKFASSRGIVIYVRDMLSRYQVDALRYFISAAGPENQDSDFTWSEFVR 359

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           R N++L    GNLV+R+ SMI K +  + P  G FT  D+++L   +   + + + +++ 
Sbjct: 360 RTNSELVAAWGNLVNRTASMIAKKFGEIPPA-GDFTAEDQALLDAVNAGFETVGDLIESH 418

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
               ALA+++ LV E +RY    +P++LK ++  DR  T+L+V  +V+  L +++  F+P
Sbjct: 419 HQKAALAEIMRLVGEANRYVTTTEPFKLKDESQRDRLGTILHVLAQVVTDLNLMMSPFLP 478

Query: 468 KLANKIFDILFVADENRCFQSLDQ 491
             AN I  +L  A +      +++
Sbjct: 479 TSANAIDKVLGGAGDVAPLPRIEE 502


>gi|169859193|ref|XP_001836237.1| methionyl tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116502714|gb|EAU85609.1| methionyl tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 718

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 111/578 (19%), Positives = 207/578 (35%), Gaps = 76/578 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G+     + ADV +R+ R      L+  GTDE+G      A 
Sbjct: 30  KNILITSALPYCNNVPHLGNIIGSTLSADVFSRYSRTRNQRTLYVCGTDEYGTATETQAL 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+     +   +  DI +D F RT+   H D  + ++  +   G + K  
Sbjct: 90  KEGITPRELCDKYYVLHKATYEWFDIGFDHFGRTSTPYHTDISQEIFLNLGKNGFLEKQE 149

Query: 124 YSGWYSLRDEAYY-----------------------------NDDEVYKGADGQYYNAQH 154
               Y      Y                                 E  +G      +   
Sbjct: 150 KEQVYCEGCPKYVYYTSCYGSFANVALDRFLADRYVEGVCPHCGYEDARGDQCDGCSRTL 209

Query: 155 NPVQWMEEEGYFFRLSA-------------YQDKLLSYYESHPEFILPIERRNEVIS--- 198
           + V+ ++      +                 + +  +       +       N VI+   
Sbjct: 210 DAVELIKPRCLVDKTHKVTTKLSSHMYLKLNEIQPKTEEWIKSSWKKGKWSPNAVINGDG 269

Query: 199 -----FVKSGLKDLSLSRKTFDWGIKIPDD-------PQYIMYVWIDALTNYLTTTGYLD 246
                 +K GL    L+R    WG+ +P +          ++YVW DA   Y + T  L 
Sbjct: 270 EIIDARLKMGLLPTPLTRD-LKWGVPVPIEGEDVHGMKDKVLYVWFDAPIGYPSITANLT 328

Query: 247 NPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGE 301
                     P ++     +GKD + FH +YWP+  +       K   + +  ++ ++G 
Sbjct: 329 PEWKQWWLN-PENVDLYQFMGKDNVYFHTVYWPSVQIGDGRNWTKLHHLSTTEYLNYEGG 387

Query: 302 KISKSLGNVID-PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           K SKS    +  P      +     RY+L+       D  +         N  L N  GN
Sbjct: 388 KFSKSKNRGVFGPAAKDTGIPASVWRYYLLSTRPETADAMFSWSDCVAANNNVLLNNFGN 447

Query: 361 LVSRSVSMILKDYDGMIPT----PGAFTESDE---SILSVCSRVLQEIRENMQNQLIHRA 413
            V+R++  I   Y G+IP     PG ++ +DE      +  + +L++  + M    +   
Sbjct: 448 FVNRALKFISSQYGGVIPDSEDAPGPYSPNDEVDGEFFTHVNSLLKDYIDAMDAVKLRLG 507

Query: 414 LAQVISLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           L  V+ + ++ + Y  +    + L  + P R + V+     +I  L++L+  F+P     
Sbjct: 508 LQTVMLISAQGNNYLQSSGLNKALMTSKPKRCAQVVSRAANLIYLLSVLIHPFMPATGAA 567

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           I   L               +  G  +  T + +F + 
Sbjct: 568 IERQLNAPPRAVP-DVFSNDILAGHTIG-TPEHLFKKI 603


>gi|296813921|ref|XP_002847298.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842554|gb|EEQ32216.1| methionyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 615

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 110/548 (20%), Positives = 217/548 (39%), Gaps = 41/548 (7%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ + N  PH+G+    ++  D  AR+ R  G++ L+  GTDE+G    
Sbjct: 14  VPGKRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGTDEYGTTTE 73

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+      ++    +IS+D F RTT +   D  + ++ K+   G +
Sbjct: 74  AKALVDKCTPQELCDKYHAIHAEIYKWFNISFDIFGRTTTQLQTDITQDIFLKLKQNGFL 133

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHN---------PVQWMEE 162
            +   +  Y     ++  D  V        Y  A G   +             P   ++ 
Sbjct: 134 TERMTTQLYCQEHHSFLADRFVEGECPVCGYTDARGDQCDLCGQLLESLQLKYPRCKIDG 193

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKT 213
                + + +    L   + + E          V S         ++K GLK  S++R  
Sbjct: 194 SKPITKDTKHIFLELDKLQPNIESFFRDSAAAGVWSNNGTVITSAWLKEGLKPRSITRD- 252

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
            +WG  + +P   + ++Y W DA   Y++ T         K    P D+     IGKD +
Sbjct: 253 INWGTRVPLPGYEEKVIYSWFDACIGYVSITA-QYTDQWEKWWRNPEDVQLYQFIGKDNV 311

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   +       K   + +  ++ ++G K SKS G  +      +  +  D  
Sbjct: 312 VFHSVIFPGSQIGTGDTWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADIW 371

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFT 384
           R FL+       D  +  D      N  L    GN V+R +  +  + Y+ ++P    + 
Sbjct: 372 RCFLLSHRPEAGDSEFTWDAFINCNNNLLLKNFGNFVNRVLKFVNSRHYNNIVPNWAEYR 431

Query: 385 E-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
           E S ++     +++L +  + +    I  A + V+ +  + + +    K    L +  P 
Sbjct: 432 EDSFDTFKKEINKLLSQYIQELDTVKIRSAWSIVLQISQQGNGFLQLNKLDNNLAENEPF 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           R + V+ + + ++  LA ++  ++P  A  I   L               +KPG  + K+
Sbjct: 492 RCAAVIGIAINMVHLLASIIAPYMPDTAKSINSQLRADPLPIPDHWNADSIKPGHEIGKS 551

Query: 503 FDPIFPRF 510
            + +F R 
Sbjct: 552 -EHLFSRI 558


>gi|302684777|ref|XP_003032069.1| hypothetical protein SCHCODRAFT_67821 [Schizophyllum commune H4-8]
 gi|300105762|gb|EFI97166.1| hypothetical protein SCHCODRAFT_67821 [Schizophyllum commune H4-8]
          Length = 700

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 114/563 (20%), Positives = 216/563 (38%), Gaps = 58/563 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    + I++A+ Y N  PH+G+     + ADV +R++R      L+  GTDE+G     
Sbjct: 30  EGERNILITSALPYCNNVPHLGNIIGSTLSADVFSRYNRTRNRRTLYVCGTDEYGTATET 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   G+T K   D+         +  ++ +D F RT+   H    + ++  +   G + 
Sbjct: 90  QALKEGITPKELCDKYHALHVATYEWFNLGFDYFGRTSTPWHTTISQEIFTNLYKNGYLE 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGY---- 165
           K      Y      +  D  V            +G      +   +P+  ++        
Sbjct: 150 KQDKEQTYCEGCPKFLADRFVEGTCPHCGYDDARGDQCDGCSRTLDPIDLIKPRCLVDKT 209

Query: 166 ---FFRLSAYQDKLLSYYESHPEFILPIERRNEVISF--------------VKSGLKDLS 208
                ++S++    L+  +   E  +    +    S               +K+GL   +
Sbjct: 210 HVVTRKISSHMYLKLNAIQPKTEEWIKATWKKGKWSPNAVINSEGEIIDPRLKNGLVPTA 269

Query: 209 LSRKTFDWGIKIPD-------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL- 260
           ++R    WG+ +P            ++YVW DA   Y + T              P  + 
Sbjct: 270 ITRD-LTWGVPVPVVDEALEGMKDKVLYVWFDAPIGYPSITANYTPEWRQWWFN-PEHVN 327

Query: 261 --HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVID-PIE 315
               +GKD + FH +Y+P+  L           + +  F+ ++  K SKS    +  P  
Sbjct: 328 LYQFMGKDNVYFHTVYFPSVELGDGRNWTMLHHLSTTEFLNYENGKFSKSKNRGVFGPAA 387

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
               V  D  RY+L+       D  +         N  L N  GN V+R++  +   YD 
Sbjct: 388 KETGVPSDVWRYYLLSTRPETGDAMFSWSEFIAANNNVLLNNFGNFVNRALKFVTSQYDS 447

Query: 376 MIPT----PGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           ++P     PG ++    +D   ++  + +L E   NM+   +   L  +++L +  + Y 
Sbjct: 448 IVPDGGDAPGPYSPNDVNDADFIADVNNLLAEYTANMEAVKLRAGLQTIMALAARGNGYL 507

Query: 429 DAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            A K  + L   +P R + VL   V +I  L++L+  ++P  +N +   L  A      +
Sbjct: 508 QASKLGKALMIEDPTRCAQVLARAVNLIYVLSVLVYPYMPATSNAMLAQLN-APARVVPE 566

Query: 488 SLDQRLKPGFMLHKTFDPIFPRF 510
           +    +  G +L  T + +F R 
Sbjct: 567 AFGNDILAGHVLG-TPEHLFKRI 588


>gi|39973615|ref|XP_368198.1| hypothetical protein MGG_01046 [Magnaporthe oryzae 70-15]
 gi|145018000|gb|EDK02279.1| hypothetical protein MGG_01046 [Magnaporthe oryzae 70-15]
          Length = 700

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 118/580 (20%), Positives = 210/580 (36%), Gaps = 78/580 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +E + +++A+ Y N  PH+G+    ++ ADV AR+ R  GL  L+  G+DE+G      
Sbjct: 13  GQENILVTSALPYVNNVPHLGNIIGSVLSADVFARYCRAKGLQTLYVCGSDEYGTATETK 72

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GV       +     +++ D   I +D F RT    H    + ++ K+   G I +
Sbjct: 73  ALEEGVDPATLCAKYHAVHKEIYDWFRIEFDVFGRTPTPEHTQIVQDIFSKLWKNGFIEQ 132

Query: 122 GCYSGWYSLRDEA--YYNDD--------EVYKGADGQYYNAQHNPVQWMEEEG------- 164
                 +  R E   +  D           Y GA G   +A  N +  ME +        
Sbjct: 133 QETVQAFCARPEHNTFLADRFVEGECSLCHYTGARGDQCDACGNLLDPMEPDKDSSAPAE 192

Query: 165 ----------------------------YFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
                                       + F         +  +    E        +  
Sbjct: 193 DDAQKATGWLINPKCKVDGSTPEKRRTRHLFLRLDALKDEIVSWLKETETGWSSNCVSIT 252

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQ---------YIMYVWIDALTNYLTTTGYLDN 247
            S++  GLK   +SR    WG+ IP              + YVW DA   Y + T    +
Sbjct: 253 HSWIDKGLKPRGISRD-LKWGVPIPKGLDGLDEEEYARKVFYVWFDACIGYPSITKTYTD 311

Query: 248 ------PDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFI 296
                  +  K    P ++     +GKD + FH I +PA  L    P  K   + +  ++
Sbjct: 312 KDNLDGNNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTRQPWTKVNHLSTTEYL 371

Query: 297 LHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
            ++G K SKS G  +         +  D  RY+L+       D  +  +      N DL 
Sbjct: 372 NYEGGKFSKSKGVGVFGNTAQSTGIDPDVWRYYLLSRRPESSDSEFKWEEFIDANNNDLL 431

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             +GNLV R V          +P        + +   +  +++LQ+   N++   +   L
Sbjct: 432 KNLGNLVQRVVKFAHAKMGAKVPEYAKKEVPTFDQHKAEVNKLLQDYISNLKATKLRAGL 491

Query: 415 AQVISLVSEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           A  + + +  ++     K   +L   +P+  + ++ + ++ +  +A LL  ++P  A  I
Sbjct: 492 ATTMLISALGNKLLQDHKLGNQLLDEDPELCNGLIALALDHLYLIASLLFPYMPGTARSI 551

Query: 474 FDILFVADENRCFQSL--------DQRLKPGFMLHKTFDP 505
              + +A  +    S            L PG  L +   P
Sbjct: 552 LRQIGLAKGDESQDSAFRIPEVWKGDSLTPGTPLGEPERP 591


>gi|327292537|ref|XP_003230967.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466904|gb|EGD92357.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 599

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 108/546 (19%), Positives = 204/546 (37%), Gaps = 50/546 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ + N  PH+G+    ++  D  AR+ R  G++ L+  G DE+G    
Sbjct: 9   VPGQRNILITSALPFVNNVPHLGNIIGCVLSGDAFARYCRGRGINTLYVGGADEYGTTTE 68

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G +
Sbjct: 69  AKALADNCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLEKNGFL 128

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN-----------------AQHNPVQWMEE 162
            +   +  Y     ++  D  V     G  Y                     NP   ++ 
Sbjct: 129 EERMTTQLYCEEHHSFLADRFVEGECPGCGYTDARGDQCDLCGQLLESLQLRNPRCKIDG 188

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
                R + +    L   ++  E        N            S++K GLK  S++R  
Sbjct: 189 STPVTRDTKHIFLELDKLQAKVENFFRDSTTNGSWSNNGAIITASWLKEGLKPRSITRD- 247

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  + +      ++Y W DA   Y++ T    +      +  P D+     IGKD +
Sbjct: 248 ISWGTRVPLSGYEDKVIYSWFDACIGYVSITARYTDQWKRWWRN-PKDVQLYQFIGKDNV 306

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +PA  +       K   + +  ++ +KG K SKS G  +      +  +  D  
Sbjct: 307 IFHSVIFPASQIGTEDTWTKLHHLSTTDYLTYKGGKFSKSRGIGVFGDSAQKTGIPADIW 366

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R FL+       D  +  D      N  L   +GN VSR +  +    D      G    
Sbjct: 367 RCFLLSHRPETGDSEFTWDAFVNCNNNLLLKNLGNFVSRVLKFVNSRRDSFATFKGE--- 423

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
                    +R+L +    +    I  A + V+ +  + + +    +    L +  P + 
Sbjct: 424 --------INRLLTQYNRELDAVKIRSAWSTVLQISQQSNGFLQLNRLDNSLAENEPSKC 475

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           + V+ +    +  LA L+  ++P  AN I   L         +     +KPG  +    +
Sbjct: 476 AAVIGIATNTVHLLASLIAPYMPDTANSINAQLRADPLLIPDRWNADSIKPGHEIG-RAE 534

Query: 505 PIFPRF 510
            +F R 
Sbjct: 535 HLFTRI 540


>gi|301166247|emb|CBW25822.1| putative methionyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 569

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 125/555 (22%), Positives = 232/555 (41%), Gaps = 47/555 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E+ K  I+ A+ Y N   H GH A   + +DV  R  +L G   LF +G+DEHG  I 
Sbjct: 1   MQEK-KYLITAALPYANGPIHFGHMAGAYLSSDVYNRHRKLQGHKTLFISGSDEHGVAIM 59

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+      + +V++  R   ++     I +D F +T+   H +     +K + +KG I
Sbjct: 60  LNAKKVSEPYQEYVNKWHREHSELFKDFGIGFDFFGQTSADYHKEEVIKWFKVLHEKGYI 119

Query: 120 YKGCYSGWYSLRD-----------EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
                   Y                 Y  D E  +G +        +PV+          
Sbjct: 120 EPKDSQQLYCNDCHNHLPDRFVEGTCYKCDYEHARGDECPNCGEFIDPVKLTNTVCKICA 179

Query: 169 LSAYQDKLLSYYESHPEFILPIERRN--------------EVISFVKSGLKDLSLSRKTF 214
                +  ++ Y        P  R+                V S  K  L D +++R   
Sbjct: 180 SQNISEVTVTQYYICLSKYHPEYRKWLETKSDEWRKTVYPYVDSLTKENLHDRAITRD-I 238

Query: 215 DWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPAD----LHVIG 264
           DWGI   +P+     +YVW DA   Y++ T        S       +W +D     H IG
Sbjct: 239 DWGIDVPLPNTEGKKLYVWFDAPIGYVSNTKKYLEQVESSEDYINDWWNSDDVELTHFIG 298

Query: 265 KDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           KD + FH + +P   +++ +  P  +V ++ F+  +G++ SKS G+ +D  + + + G +
Sbjct: 299 KDNIIFHTVIFPTMSMASGICKPANQVPANQFLNLEGKQFSKSTGHYVDAAKAVAKFGQN 358

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALRY+L+  +    D  +  + L+ +VN +LAN IGN ++R +    K+++  +P     
Sbjct: 359 ALRYYLLSILPEQTDSSFSWEQLQAKVNNELANNIGNFLNRCLKFTQKNWNEGMPAKYYE 418

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             +  S     S  ++ + E +    I + + +V+ +    + +F    PW   K + D 
Sbjct: 419 GFTGSSACESLSADIKALNELVDGYNIKKGIEKVMFIGQSANNFFSDNAPWAQIKEDKDL 478

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKI---FDILFVADENR-----CFQSLDQRLKP 495
           A   L  +      L ++++ F+P L++ I   ++ +   +  R         +D+    
Sbjct: 479 AGKTLAHSSIYALCLGVIMKPFLPALSDSILKHYENILTEEHQRKIYSGDLSVIDEIFSK 538

Query: 496 GFMLHKTFDPIFPRF 510
           G +L +    + P+ 
Sbjct: 539 GHVLSEEVVALVPKI 553


>gi|296205178|ref|XP_002749648.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 2
           [Callithrix jacchus]
          Length = 522

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 149/533 (27%), Positives = 225/533 (42%), Gaps = 95/533 (17%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD---VLFTTGTDEHGQKIAKAA 62
           + Y +T I Y NA PHIGH Y  ++AD L R  RL         F+TGTDEHG KI +AA
Sbjct: 44  RAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRSPSTAATRFSTGTDEHGLKIQQAA 103

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             AG+      D+ S  F+ +     IS+                   ++          
Sbjct: 104 ATAGLAPTELCDRISEQFQQLFQEAGISF---------------SWTKEENYIFRLSQFR 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   +      +  +              +QW++EE     +S     L      
Sbjct: 149 EPLQRWLRGNPQAITPEPFHHVV-----------LQWLDEELPDLSVSRRSSHLHW---- 193

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
                                             GI +P D    +YVW+DAL NYLT  
Sbjct: 194 ----------------------------------GIPVPGDDSQTIYVWLDALVNYLTVI 219

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           GY   P+     +WPA  H+IGKDIL+FHAIYWPAFLL A +  P++++ H      G+K
Sbjct: 220 GY---PNAEFKFWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRIYVHSHWTVCGQK 276

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + + K +N++LA+ +G L+
Sbjct: 277 MSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEKVVKLLNSELADALGGLL 336

Query: 363 SRSVSMILKD--------YDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQ 408
           +R  +  +           +     PG           D +++S  + + + + ++  N 
Sbjct: 337 NRCTAKRINPSETYPAFCTNCFPSEPGLMGPSVRAQAEDYALVSAVATLPKRVADHYDNF 396

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAF 465
            I++AL  V S V + + +     PW+L   +P  A   STVL+V +E +R    LLQ  
Sbjct: 397 QIYKALEAVSSCVRQTNGFVQRHAPWKLNWDSPVDAPWLSTVLHVALECLRVFGTLLQPV 456

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLK--------PGFMLHKTFDPIFPRF 510
            P LA+K+   L V+   R    L    +         G  L      +FP+ 
Sbjct: 457 TPSLADKLLSRLGVSVSERSLGKLYFLPRFYGHPCPFEGRRLGPETGVLFPKL 509


>gi|118399643|ref|XP_001032146.1| methionyl-tRNA synthetase [Tetrahymena thermophila]
 gi|89286484|gb|EAR84483.1| methionyl-tRNA synthetase [Tetrahymena thermophila SB210]
          Length = 540

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 145/517 (28%), Positives = 248/517 (47%), Gaps = 41/517 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
              +++ I+T I Y N+QPHIGH Y +I++D   ++  +D  +  F TGTDEHGQKI  +
Sbjct: 14  SSNKQISITTPIFYVNSQPHIGHLYTLILSDAYHKWKLIDNYESYFQTGTDEHGQKIQNS 73

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+ A    + FVDQ S+ F D+A    ISYD F RT+++                     
Sbjct: 74  AKQAQKDPQQFVDQVSQKFVDLASQYSISYDKFNRTSDE--------------------- 112

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y GWY   DE +  + ++ K + G++      PV W+ EE + F L   ++ ++ Y E
Sbjct: 113 -KYEGWYHTSDETFVGEKDLVKDSSGKFVTQSGQPVDWVSEETHIFVLDKIREAVIKYLE 171

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           +           + +    +     +S  +    WGI +P + +Y +YVW+DALTNYLT 
Sbjct: 172 NEKPVYPEHYNNSMIKQLEELKDISISRPKSRLTWGITVPSNEKYTIYVWLDALTNYLTG 231

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            GY  N + +K        H++GKDIL+FH+I+WPAFLL+A    P+K+  H   +   +
Sbjct: 232 LGY-PNNNINKIHLSNNFFHIMGKDILKFHSIFWPAFLLAAGYSTPQKILIHHHWIKDNQ 290

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL------- 354
           K+SKSLGNV+DP+E+  + G+D++R + + E     D  +D+  L K  N  +       
Sbjct: 291 KMSKSLGNVVDPVELGNKYGIDSVRLYFLSEGPQDFDANFDEVDLTKTYNLFIEGFSNLN 350

Query: 355 ----------ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
                        + NL+SR  +  +     +        E D   +S  + +  +I+E+
Sbjct: 351 SIKIINAKHNIQFLVNLMSRVFNKKIIKDGKITEISWVLNEQDLEYISKFTTISNKIQEH 410

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +      R    +  L    ++      PW+   +  ++  +  Y+ +E +R L+I L  
Sbjct: 411 LDKCDFRRGYFAMSELWGMTNKLMTDHAPWQKDISEVEKQKS-SYLILESVRVLSIFLYP 469

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           F+P+    ++ ++ + ++      L  R+     L K
Sbjct: 470 FIPQYIQNVYQLMNIKNDRINTNYLQFRIVDKNNLPK 506


>gi|48477614|ref|YP_023320.1| methionyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|68565981|sp|Q6L1M5|SYM_PICTO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|48430262|gb|AAT43127.1| methionyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 690

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 125/521 (23%), Positives = 220/521 (42%), Gaps = 47/521 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E++ ++ A+ Y N   H+GH A   + AD+  RF+RL+G +VLF +G+DE+G  I   A+
Sbjct: 3   ERILVNCALPYANGPLHLGHIAGAYLAADIFVRFNRLNGNEVLFVSGSDEYGTPITITAE 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               + +   D   R        LDI +D F RTT+  H       +  + +K  + K  
Sbjct: 63  KNKTSPQNVADIYHREHEQTFKNLDIVFDIFTRTTDPEHVKDVDEFFINLLNKNYLEKRY 122

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG-------- 164
               Y      +  D  ++           +G          +P++ +            
Sbjct: 123 MVSPYCKSTGKFMPDRYIHGTCPYCGFNDARGDQCDECGRTLDPIELINPRCTSSNEEPL 182

Query: 165 -----YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                +FF         L  Y +  E   P    N   S +  GL+   ++R   DWG+ 
Sbjct: 183 FIATEHFFLRLDLLSDELLNYLNTRENWKP-NVINFTRSIINEGLRPRPITRD-IDWGVP 240

Query: 220 IPDD--PQYIMYVWIDALTNYLT--TTGYLDNPDGSKAKFWPAD-----LHVIGKDILRF 270
           IP +      +YVW +AL  Y+T       +  D    K +  D      + IGKD + F
Sbjct: 241 IPLNGFEGKRIYVWFEALIGYITGARVYSKNIKDDDYWKKFWLDKNVKSYYFIGKDNIPF 300

Query: 271 HAIYWPAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H I WPA L+   +  LP  V ++ ++  +G + SKS G      E +  V  + LRY++
Sbjct: 301 HTIIWPAMLIAHGDYNLPYNVPANEYLRFEGAQFSKSRGIGYTVNEALSLVNKNYLRYYM 360

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDE 388
              +    D  +  + L  RVN++L +  GN + R +  I  +  +     P +      
Sbjct: 361 ASIMPETGDSSFSLNELVSRVNSELIDKYGNFIYRVLGFISNRKINIKKCEPDS------ 414

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            I++   R   E  E+++N  I   L   +  V+  + YF+++ PW +   + +R + VL
Sbjct: 415 -IINEFKRFFDEYSESIKNIKIKNGLQIWLEAVTLANNYFNSEAPWNI--NDHERLNQVL 471

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           + ++++   L  +L  +VP  +++I   L     N  F  +
Sbjct: 472 FTSLKISMYLTAMLYPYVPSASSEILSSLGFKTVNYKFDDM 512


>gi|303391413|ref|XP_003073936.1| methionyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303303085|gb|ADM12576.1| methionyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 543

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 114/536 (21%), Positives = 215/536 (40%), Gaps = 45/536 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K +I++A+ Y N QPH+G+    ++  DV +++ +  G   L+  GTDE+G  I   A +
Sbjct: 2   KKFITSALPYVNNQPHLGNVIGSVLSGDVYSKYCKKKGETCLYICGTDEYGTAIEMEAVS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G       ++N R  + + D  +I +D F  T+   H +  + L+ K+ + G   +   
Sbjct: 62  QGRPPLEICEENRRLHKQVYDWFNIDFDYFGFTSTPEHTEMVQSLFMKMYNNGHFKELEI 121

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQW-------------- 159
             +Y      +  D  V            KG         +N ++               
Sbjct: 122 EQFYCGNCGIFLADRYVVGECKFCGDLGAKGDQCDACGQTYNFLELLSPKCSICSTVPII 181

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGI 218
                 FF L  ++  LL  Y+ +         +N    ++        ++R   F WG+
Sbjct: 182 RSTCHLFFDLEMFRPHLLETYKENGHLWSQ-NAQNIFNQWISMEFHPRCMTRDLKFRWGV 240

Query: 219 KIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            +P +   + + YVW DA   YLT    L   D S+       +  +GKD + FH I +P
Sbjct: 241 PVPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFSEWCKDSELVQFMGKDNVAFHTIIFP 300

Query: 277 AFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--VGVDALRYFLVRE 332
           A + +     P  K++ +  ++  + +K SKS  + I  +++++         RY+L++ 
Sbjct: 301 AMIYATGEKYPIIKRLSATEYLQFENQKFSKSRRHGIFGLDLVKGNLGKPCIWRYYLMKI 360

Query: 333 IAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD  +     ++ V ADL N +GN V+R +  I    +    +     E D+  +
Sbjct: 361 RPESTKDSNFTFYDFQQSVTADLINNLGNFVNRVLKYIESRCN-SRVSLLELDEKDKEFV 419

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              + + +     M    +   L  V+ +    + Y            N  R S    + 
Sbjct: 420 EDINGLYRRYITKMDEIKLREGLQVVMEISRRGNEYIQEGVR------NKARKSHFFCLG 473

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V+  LA LL  F+P  + +I  +  + +E    +S+  ++  G M+     P+F
Sbjct: 474 FSVVGFLATLLYPFMPVASVEILRMCNL-EETGLPESI--QIIDGHMIGGRICPLF 526


>gi|312377089|gb|EFR24006.1| hypothetical protein AND_11736 [Anopheles darlingi]
          Length = 495

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 149/515 (28%), Positives = 239/515 (46%), Gaps = 66/515 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL----DGLDVLFTTGTDEHGQKIAK 60
           +  +++T I Y NA PHIGH Y  +IAD + RF+R+           +TGTDEHG KI +
Sbjct: 15  KNSFVTTPIFYVNAAPHIGHLYSAVIADAVHRFNRIATPEKSRSCFLSTGTDEHGMKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA     +T+ + +  S  +R++     + Y  FIRTTE  H    +  W+ +   G IY
Sbjct: 75  AAVLHSTSTEDYCNSISARYRELFRQFRVDYSRFIRTTETDHRRAVQTFWRTLEASGSIY 134

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSAYQDKLLSY 179
              Y+GWY + DE +  + ++ +   G+  + +  +PV+W EE+ Y FRLS YQD++  +
Sbjct: 135 SANYAGWYCVPDETFLTESQLKENERGEKCSLESGHPVEWTEEQNYMFRLSQYQDEVRYW 194

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTN 237
            +S  + + P + R  ++ ++   L D+S+SR      WGI +P DP   +YVW+DAL N
Sbjct: 195 VKSSEDRVQPEKFRRILLDYLDEPLPDISISRPIGRVSWGIPVPTDPSQSVYVWLDALVN 254

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           YLT  GY        A  WP  + V+GKDIL+FH IYWPAFLL+A L  P+++  H    
Sbjct: 255 YLTVVGYPKEG---FAAQWPPSVQVLGKDILKFHGIYWPAFLLAAKLEPPRQLLVHSHWT 311

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              +K+SKS  NV+DP E  E    + LRYFL+RE     DG       +K     + + 
Sbjct: 312 VDNQKMSKSKFNVVDPAERAELYTHEGLRYFLLREGVAHSDGNKTLHHYQKNNFYLVVDT 371

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + +L+  + +              + +  D ++L+    +  E+                
Sbjct: 372 VMHLLHTTNNFFETT--TPWKLKKSESPDDRAMLNAILTITMEV---------------- 413

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                                                +RQ AI++Q  +P L  ++ D L
Sbjct: 414 -------------------------------------LRQTAIVMQPIIPVLTERLLDKL 436

Query: 478 FVADENRCFQSLDQRLKPGFM-LHKTFDPIFPRFL 511
            +    R +++     +     L      +F R +
Sbjct: 437 NIPTSARTWENTKLSFRTKDASLGNQDSILFRRIV 471


>gi|302543872|ref|ZP_07296214.1| methionine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461490|gb|EFL24583.1| methionine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 584

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 122/507 (24%), Positives = 216/507 (42%), Gaps = 47/507 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYMRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+   VF  Q     + + D   +++D F R++  ++ +  + + +++   G I +   
Sbjct: 63  AGLPVDVFCAQQHDAQKAIYDGFGLAFDYFGRSSSAQNVEITQRIARELKGHGFIEERSI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSNADGRFLPDRYIEGTCPHCGYDRARGDQCENCTRVLDPTDLIDARSAISGSSDLE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S   +++ ++ E + +   P    +    ++  GL+D +++R   DWG+
Sbjct: 183 IRETKHLFLLQSKLAEEVGTWVEENGKQW-PTLASSIARKWLTEGLQDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFWPADLH-------V 262
            +P D          + YVW DA   Y+  T    + D      K W  D+         
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWADRDPENRDWKSWWYDVDTTVRYTEF 300

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKK--VFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           + KD + FH + +PA LL       K   V +  ++ + G K S S    +     +E +
Sbjct: 301 MAKDNVPFHTVMFPATLLGTRDVWKKVDFVKAFNWLTYYGGKFSTSQKRGVFTDAALEVL 360

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  RYFL+       D  +  +     VN DLA+ +GN V+R +S   K +   +P  
Sbjct: 361 PADYWRYFLMANAPESDDTSFTWEHFTATVNKDLADTLGNFVNRVLSFSRKRFGDEVPAG 420

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
            A  E++E +    +R+L E  E+M      +A A + +L S  + Y + + PW   K++
Sbjct: 421 KAAGEAEERLGEEIARLLAEYEEHMDTLQFRKAAAALRALWSAGNSYLEEKAPWLEIKSD 480

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A+  L   + +I   AI+ + F+P
Sbjct: 481 QEAAALTLRTAMNLIHLYAIVSEPFIP 507


>gi|302537896|ref|ZP_07290238.1| methionyl-tRNA synthetase [Streptomyces sp. C]
 gi|302446791|gb|EFL18607.1| methionyl-tRNA synthetase [Streptomyces sp. C]
          Length = 571

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 120/554 (21%), Positives = 224/554 (40%), Gaps = 52/554 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  I++A+ Y N   H+G+    M+ ADV +R+ R  G DVL+   TDEHG     AA+ 
Sbjct: 3   RHLITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+    F  Q     + + D  ++S+D F R++  ++ +  +   +++   G I +   
Sbjct: 63  NGLPVSEFCAQAHDAQKAVYDGFELSFDYFGRSSSAQNVEITQHFARQLQANGFIEERAI 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPV---------------------Q 158
              YS  D  +  D        + G D    +   N                       +
Sbjct: 123 RQVYSPADGRFLPDRYVEGTCPHCGYDKARGDQCENCTRVLDPTDLIEPRSAISGSTELE 182

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E +  F   S  Q ++ ++   H +   P    +    ++  GL D +++R   DWG+
Sbjct: 183 VRETKHLFLLQSKLQHEVEAWVARHED-EWPQLASSIARKWLTEGLHDRAITRD-LDWGV 240

Query: 219 KIPDD-------PQYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPAD----LHVI 263
            +P D          + YVW DA   Y+ +T    + D +    K+ ++ A+       +
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIASTKEWADADPANRDYKSWWYEAEDVRYTQFM 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            KD + FH + +PA  L    P      V +  ++ + G K S S    +   + +E + 
Sbjct: 301 AKDNVPFHTVMFPATELGTREPWKMVDYVKAFNWLTYYGGKFSTSQKRGVFTDQALEILP 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  RYFL+       D  +  +     VN DL   +GN V+R ++   K +   +P   
Sbjct: 361 ADFWRYFLIANAPESDDSSFTWEHFAATVNKDLGGTLGNFVNRVLTFSRKKFGDEVPAGN 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
              E++  +    + +L E   +M+     +A A + +L S  + Y D + PW   KT+ 
Sbjct: 421 PAGEAESRLGEQIAELLAEYEGHMETLQYRKAAAALRALWSAGNAYLDEKAPWLEVKTDL 480

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-----LKPG 496
           D A+  L   + +I   +++ + F+P  A  +     +  +   + + +Q      +  G
Sbjct: 481 DAAALTLRTAMNLIHLYSVVSEPFIPASARAMRSSFELPGDTAAWVTPEQAKALDTVPAG 540

Query: 497 FMLHKTFDPIFPRF 510
                    +F R 
Sbjct: 541 TPFTVPP-VLFARI 553


>gi|189218093|ref|YP_001938735.1| Methionyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189184951|gb|ACD82136.1| Methionyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 444

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 152/447 (34%), Positives = 236/447 (52%), Gaps = 17/447 (3%)

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           K F D  +  F  + + L I YD F RTT+  H    R   +K++DKG IY   + G+YS
Sbjct: 4   KKFCDIQAEKFLQLWEKLQIHYDAFARTTQPSHVQYVRHALQKLADKGLIYFKEHEGYYS 63

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LR E +  + ++  G     +   +  V   +E  YFFRLSA+ + L SY   +  + +P
Sbjct: 64  LRQEQFVTEKDLVDGK----WPEIYGEVIKTKEPNYFFRLSAFSEWLKSYVRDNENWFIP 119

Query: 190 IERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
             +R E++  ++  L DL +SR      WGI +P D  Y+ YVW DAL NY++       
Sbjct: 120 QSKRKELLGALERPLADLCISRPVSRLSWGIPLPFDENYVTYVWFDALLNYVSFAR---- 175

Query: 248 PDGSKAKFWPADLHVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
            +G    +WPA LHVIGKDI +  HAIYWP  L +  L  P+    HG+ ++KG K+SKS
Sbjct: 176 KEGDNQGWWPAQLHVIGKDIFIPAHAIYWPIILKALELEQPRHFLIHGWWMNKGAKMSKS 235

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+  +E  G DALRY+L+RE+A G+D  +  D +  R N+DL N +GNLV R  
Sbjct: 236 LGNFIDPLPYLEIFGADALRYYLLREMAFGQDADFADDKIWARYNSDLCNDLGNLVQRIT 295

Query: 367 SMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            MI K   G+IP+       E+++ +L     + ++   + +   I +AL ++   + ++
Sbjct: 296 VMIHKYRSGVIPSCSETMMEENEKELLDR--DLFEKYCLSFEKYDIAQALQEIWQHIKKL 353

Query: 425 DRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +RY +   PW L K +    R   +L  +   +++ A+L+   +P+ ANKI  +L +  +
Sbjct: 354 NRYIENNAPWSLAKNSKQSQRLDCILLASSICLKRYALLIDPVMPQTANKILSLLNIETQ 413

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPR 509
                 L   +           P+FPR
Sbjct: 414 PWKLDDLFFAMDLAGKEISAPSPLFPR 440


>gi|110667531|ref|YP_657342.1| methionyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689847|sp|Q18JV4|SYM_HALWD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109625278|emb|CAJ51700.1| methionine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 741

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 110/561 (19%), Positives = 218/561 (38%), Gaps = 70/561 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++  + Y N   HIGH    +  D+ +R  +  G +  F +G+D HG  +A  A   GVT
Sbjct: 31  VTCGLPYANGDLHIGHLRTYVGGDIFSRALKRLGQETAFVSGSDMHGTPVAVNAAEEGVT 90

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            + F  ++   +        I +D++  T ++ + +  R + + +   G +Y+      Y
Sbjct: 91  PESFALRHHEQYETTFPQFGIEFDNYGHTHDETNVEMTREIVEALIQAGYVYEREIPVAY 150

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPV-------------------------QWMEEE 163
               + +  D  V         +A+ +                           ++   E
Sbjct: 151 DPAADQWLPDRFVNGTCPYCGAHARGDECDEGCGRHLEPGEIETPVSTITGNDAEYRRRE 210

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             FF +S  Q  L S+             +N+   +V+  L+D  ++R   DWG+  PDD
Sbjct: 211 HQFFAVSELQSYLSSFL---DRLEGTTNAQNQPREWVEGELQDWCITRD-MDWGVDYPDD 266

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--------------------------P 257
              ++YVW+DA   Y+++T       G+ +  W                          P
Sbjct: 267 NDLVLYVWVDAPIEYISSTKQYAERVGTDSFDWKNAWRDIPGVRSHSSSSAKDSSEGNSP 326

Query: 258 ADLHVIGK-------DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           ++++  G+       DI++ H ++WPA L +A    P+ V + GFI  +G+  S S    
Sbjct: 327 SNINNGGEIIHIIGRDIIQHHTVFWPAMLHAAGYTEPRAVMASGFITLEGKGFSTSRNRA 386

Query: 311 IDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +   E + E    D LRY+L       +D  +     ++RVN +L   +GN + RS+   
Sbjct: 387 VWADEYLAEGFHPDLLRYYLATNGGFQQDVDFSWSRFRERVNNELVGTVGNFIYRSLLFA 446

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            +++DG          SD S+       +      +    +       + L    + Y  
Sbjct: 447 AREFDGTP----DVALSD-SVEERIETAIDAFTAGVNEYSVRAVGDAAVKLAQFGNEYIQ 501

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +PW+L   +P +   V+   +++ + +A+L +   P  A +++  L  + +       
Sbjct: 502 HHEPWKLSNDDPQK-QQVMRDCIQLAKAIAVLFEPVTPAAAERVWADLGESGDIHTVGIE 560

Query: 490 DQRLKPGFMLHKTFDPIFPRF 510
              + P     +  + +F + 
Sbjct: 561 SALVAPPQTFDEPTE-LFEKI 580


>gi|291456978|ref|ZP_06596368.1| methionine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381389|gb|EFE88907.1| methionine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 584

 Score =  263 bits (672), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 131/548 (23%), Positives = 219/548 (39%), Gaps = 78/548 (14%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DVL  +GTDEHG  I   A+  G+T +   ++ +R        L +SYD F RTT 
Sbjct: 1   MKGNDVLMVSGTDEHGTPILVEAEKEGLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSG-----------WYSLRDEAYYNDDEVYKGADGQ 148
             H    + ++K+  + G IYKG                  +  E      E  +G    
Sbjct: 61  GNHEHVVQEMFKQCLENGYIYKGTQQVAISPSTGRTLPDRYIEGECPICHAEGARGDQCD 120

Query: 149 YYNAQ------HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-RNEVISFVK 201
               +       NPV  +  E   F  + +    L       +  L   +     +    
Sbjct: 121 ACGNELDPDELINPVSKINGETPRFEQTEHYFLDLPALAEANKAWLETRKGWRTNVINFS 180

Query: 202 SGLKDLSLSR---KTFDWGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPD--GS 251
            GL      R   +  DWGI +P     D+P   +YVW DA+  YL+ +           
Sbjct: 181 LGLFKEVKPRAITRDIDWGIPVPVKGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPE 240

Query: 252 KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFS 292
           K + W  D      + +GKD + FH+  WP+ +L+ N              L LP++V +
Sbjct: 241 KWREWWNDPKCPAYYFMGKDNITFHSQIWPSEMLAYNGKGSKGGETGPMGPLNLPEQVVA 300

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             F+  +G+K S S G VI   +++    VDA+RY++        D  +      +  N 
Sbjct: 301 SEFMTMEGKKFSSSRGIVIYVKDILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNE 360

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +LA+  GNLV+R  ++I K++  + P    + T  D  +L   S     +  +++     
Sbjct: 361 ELASSWGNLVNRVANLINKNFGEIPPLDEDSMTNEDRGLLEETSAAFDVVGSSIETHHQK 420

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            AL++ + +V ++++Y  A +PW++ K +  R  TVL+V  + +     LL  F+P  A 
Sbjct: 421 HALSEAMRVVGDINKYISATEPWKI-KDDQARLGTVLHVAAQAVADANHLLAPFLPHSAQ 479

Query: 472 KIFDILFVADENRCFQSLDQ---RLKPGFM--------------------------LHKT 502
           K+++ L  A        L +     KPGF                           +   
Sbjct: 480 KVWEALGGAGTFSPLPELKEVEDLDKPGFTYPIITGNYELGVNVHPWKSEAIEVGAVVPK 539

Query: 503 FDPIFPRF 510
             PIF + 
Sbjct: 540 PTPIFAKI 547


>gi|197104673|ref|YP_002130050.1| methionyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478093|gb|ACG77621.1| methionyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 606

 Score =  263 bits (672), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 117/586 (19%), Positives = 221/586 (37%), Gaps = 84/586 (14%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ I++A+ Y N   H+G  A  M+ ADV ARF R  G + L+   TDEHG     AA  
Sbjct: 3   RILITSALPYINGIKHLGTLAGSMLPADVYARFQRARGRETLYICATDEHGTPTELAAAE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+    F  Q       +     +S+D F R++  ++H   +   + + + G I +   
Sbjct: 63  AGLDPATFCAQQHEVQHRLGRAFGLSWDHFGRSSSPQNHRLTQRFAQTLWEAGFIEERVT 122

Query: 125 SGWYSLRDEAYYNDD-----EVYKGADGQYYNAQHNPVQWMEE----------------- 162
              YS  D  +  D        + G +    +   N  + ++                  
Sbjct: 123 QQVYSNADRRFLPDRYVIGTCPHCGYEAARGDQCENCTRVLDPADLLHPRSAVSGSTDIE 182

Query: 163 ----EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +  F R S +    L  +        P    +  + ++  GL+D  ++R   +WG+
Sbjct: 183 IRGSKHLFLRQSLFAG-KLRDWIEAKRGRWPHLVTSIALKWLDEGLQDRGITRD-LEWGV 240

Query: 219 KIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDN-----------PDGS 251
            +                      + YVW DA   Y+  T                 D  
Sbjct: 241 PVNAFEWGPNPDGKLPDVEGLAGKVFYVWFDAPIEYIGATWEWAESRAVEAGRPGADDIE 300

Query: 252 KAKFWP-------ADLHVIGKDILRFHAIYWPAFLLSAN----------------LPLPK 288
             ++W          +  +GKD + FH + +P  L+  N                  L  
Sbjct: 301 WERWWRGPEASDVTYVEFMGKDNVPFHTVGFPCTLIGVNERLGAGGAWRVAEARPWKLVD 360

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +    ++ + G K S S G  +     +E +  D  R++++       D  +  +  + 
Sbjct: 361 DLKGFNWLDYYGGKFSTSQGRGVFMDHALELLPADYWRWWIMANAPETSDATFAWEQFRD 420

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +VNADLA+ +GN V+R        ++G +P  G   E + ++ +     L+E+  +++++
Sbjct: 421 QVNADLADVLGNFVNRICKFAESRFEGQVPEGGEPGELETALEADVLMKLRELTGHLEDR 480

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              +A   +  L    ++Y     PW   KT+ DRA+  +   + +    A + + F+P 
Sbjct: 481 EFRKATTALRQLWVLGNQYLTEAAPWTAIKTDRDRAAVAVRYGLNLAALFAKVSEPFIPF 540

Query: 469 LANKIFDILF----VADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            A K+   L      A   +  + L   L+PG  +    + +F + 
Sbjct: 541 AAEKVSLALGEPFPAAWPAQDGEGLLTALEPGRRIAAP-EVLFRKI 585


>gi|85114097|ref|XP_964638.1| hypothetical protein NCU07451 [Neurospora crassa OR74A]
 gi|28926427|gb|EAA35402.1| hypothetical protein NCU07451 [Neurospora crassa OR74A]
          Length = 663

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/543 (20%), Positives = 201/543 (37%), Gaps = 67/543 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +E + I++A+ Y N  PH+G+    ++ ADV ARF R  GL  L+  G+DE+G      
Sbjct: 13  GKENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTLYICGSDEYGTATETK 72

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A + GV       +     +D+ D   IS+D F RT    H    + ++ ++   G I +
Sbjct: 73  ALSEGVDPATLCAKYHALHKDVYDWFRISFDKFGRTPTDEHTGITQEIFAQLWKNGFIEE 132

Query: 122 GCYSGWYSLRDEA------YYNDDEVYKGAD----GQYYNAQHNPVQWMEEEG------- 164
              +  +    E        Y + E     D    G   +A  N +  M+ +        
Sbjct: 133 RETTQAFCAVPEHNTFLADRYVEGECSICHDLGARGDQCDACGNLLDPMQPDKNAAGEDE 192

Query: 165 ------------------YFFRLSAYQDKLLSYYESHPEFI-------LPIERRNEVISF 199
                                R + +    L                           S+
Sbjct: 193 SKGTGWLINPRCKLDGSTPERRKTKHLYIRLDELNKEITAWLDRVENGWSANCVAITRSW 252

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQ---------YIMYVWIDALTNYLTTTGYLDN--- 247
           + +GLK   ++R    WG+ IP   +          + YVW DA   Y + T    +   
Sbjct: 253 INNGLKPRGITRD-LKWGVPIPKGLEGLSDEEYANKVFYVWFDACIGYASITKCYTDEGN 311

Query: 248 ---PDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHK 299
               +  K    P ++     +GKD + FH I +P   L           + +  ++ ++
Sbjct: 312 LEGRNWEKWWKNPDNVTLYQFMGKDNVPFHTIIFPGTQLGTKEKWTQVNHLSTTEYLNYE 371

Query: 300 GEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G K SKS G  +      +  +  D  RY+L+       D  +  +      N DL   +
Sbjct: 372 GGKFSKSKGVGVFGNNARDTGIDPDVWRYYLLSRRPESGDSEFKWEEFIDSNNNDLLKNL 431

Query: 359 GNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GNL  R V       D  +P  P     S +      +++L+E  E ++   +   LA V
Sbjct: 432 GNLCQRVVKFCQAKLDAKVPEYPKTPIASLDEYKEEINKLLKEYNEQVKGTKLRAGLATV 491

Query: 418 ISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +S+ +  ++     K   +L    P+R + V+   + ++  +A +L  ++P  A  I   
Sbjct: 492 LSISAVGNKLLQDNKLSNQLLTEEPERCNAVINFALNLLHLIAGVLSPYMPGTAQSILRQ 551

Query: 477 LFV 479
           + +
Sbjct: 552 VGL 554


>gi|315426202|dbj|BAJ47845.1| methionyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315426284|dbj|BAJ47926.1| methionyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 514

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 136/502 (27%), Positives = 225/502 (44%), Gaps = 41/502 (8%)

Query: 46  LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
           +F +G+DEHG  I   A   GV  +   D+N     ++ +   +S+D++ RT    H   
Sbjct: 1   MFVSGSDEHGTPIEVEAAKRGVDPREITDKNHALVVELFNKFHLSFDNYTRTHNPTHIAF 60

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQH 154
           C+  + KI + G IY+   +  Y      +  D  V            +G   +      
Sbjct: 61  CQNFFMKIYENGYIYEQDVNQLYCKNCGRFLPDRFVTGVCPSCGYQRARGDQCEACGKVL 120

Query: 155 NPVQWMEEE--------------GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +P+  +E                 +FF L  + DKL ++  ++    L  + RN  +S++
Sbjct: 121 DPLDLLEPRCSICGEKPVVESSRHWFFDLPQFSDKLRTWLTTNTT--LSEKVRNFSLSWI 178

Query: 201 KSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKF 255
           + GLK  +++R    WGI    P      +YVW +A+  Y + T       G      +F
Sbjct: 179 REGLKPRAVTRDNL-WGIPAPFPGAGNKTIYVWFEAVLGYPSATVEWAEKKGEPALWREF 237

Query: 256 W----PADLHVIGKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGN 309
           W        + IGKD + FH +  PA LL+ + P   P  V +  ++  +G+K SKSLG 
Sbjct: 238 WLSPDTKSAYFIGKDNIPFHTVILPALLLATHEPYILPHIVSATEYLTFEGKKFSKSLGV 297

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            I   + I  +  D  RY+LV+      D  +  DGL   VN+DL N +GN + R ++ I
Sbjct: 298 GIWLDQAIALLEADIWRYYLVKIRPETGDTNFSYDGLMAVVNSDLNNDLGNFIHRVLTFI 357

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
             ++D  IP     TE D  +L+   +   E+   +      +AL  VI L  E + YF+
Sbjct: 358 NNNFDAKIPPATHLTEEDREMLAAIEKTFTEVDSLLSEAREKQALETVIQLAREGNVYFN 417

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QS 488
            ++PW L K   + A+TVLYV  +V++ LA+LL  F P    +I +++   +E   +   
Sbjct: 418 RREPWRLVKARKEEAATVLYVAAQVLKALALLLAPFTPATTRRILELIGQGEEAVTWLGE 477

Query: 489 LDQRLKPGFMLHKTFDPIFPRF 510
               L  G  + K   P+F + 
Sbjct: 478 KPWHLPAGAPIAKPI-PLFEKL 498


>gi|46128473|ref|XP_388790.1| hypothetical protein FG08614.1 [Gibberella zeae PH-1]
          Length = 673

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 108/575 (18%), Positives = 213/575 (37%), Gaps = 74/575 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++ +  + +++A+ Y N  PH+G+    ++ ADV +R+ +  G + ++  G+DE+G    
Sbjct: 10  VEGKRNILVTSALPYVNNIPHLGNIIGSVLSADVFSRYCKARGYNTIYICGSDEYGTATE 69

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G++      +     + + D   I +D F RT  ++     + ++K++   G I
Sbjct: 70  TKALEEGLSPADLCAKYHALHKGVYDWFRIDFDIFGRTPTQQQTQIVQQIFKELWKNGYI 129

Query: 120 YKGCYSGWYSLRDEA--YYNDD--------EVYKGADGQYYNAQHNPVQWMEEE-----G 164
            +   +  +        +  D             GA G   +A    +   E E      
Sbjct: 130 EERETTQPFCTHANHGKFLADRFVEGECSICHDLGARGDQCDACGGLLDPFEPEREPSAS 189

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--------------------------- 197
               + A     L       +   P +R+ + +                           
Sbjct: 190 EDDHVEAKATGFLINPRCKVDGTTPEKRKTKHLFLRLDAVKDLLVPWFHKSSKEGDWSAN 249

Query: 198 ------SFVKSGLKDLSLSRKTFDWGIKIPDDP---------QYIMYVWIDALTNYLTTT 242
                 S++  GL    ++R    WG+ IP D          + + YVW DA   Y++ T
Sbjct: 250 CISITQSWIDKGLLPRGITRD-LKWGVPIPQDLEGLSNEEYAEKVFYVWFDACIGYVSIT 308

Query: 243 GYLDN------PDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLPK--KVF 291
             L +       +  K    P ++     +GKD + FH I +PA  L       K  K+ 
Sbjct: 309 KNLVDGDNLDGTNWEKWWKNPENVKLYQFMGKDNVPFHTIIFPASQLGTGENWTKVHKMS 368

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           +  ++ ++G K SKS G  +      E  V  D  RY+L+       D  +         
Sbjct: 369 TTEYLNYEGGKFSKSRGVGVFGNTAKETGVDPDVWRYYLLSRRPETADSEFKWQEFIDCN 428

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQL 409
           N DL   +GNL  R +       DG++P    +T+   E      +  L+          
Sbjct: 429 NNDLLKNLGNLNQRILKFAQLKLDGVVPDYTKYTDERLEEHKKEVNEALKTFIAQFDAIK 488

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           +   LA V+ + +  ++     K    L    P+R + V+ + +  ++ LA ++  ++P 
Sbjct: 489 LRAGLASVMHISALGNKLLQDSKLNNQLLAEEPERCAAVIGLGINHLQLLASIVYPYMPS 548

Query: 469 LANKIFDILFVADENRCFQSLDQRL-KPGFMLHKT 502
            ++ I + +         ++    + KPG  + + 
Sbjct: 549 TSDAILEQIGSPGLVSIPETWTGDIVKPGQKIGEP 583


>gi|322800514|gb|EFZ21518.1| hypothetical protein SINV_15365 [Solenopsis invicta]
          Length = 1016

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 118/592 (19%), Positives = 220/592 (37%), Gaps = 100/592 (16%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K    + I++A+ Y N  PH+G+    ++ AD+             F +GTDE+G     
Sbjct: 260 KGERNILITSALPYVNNVPHLGNIIGCVLSADI-------------FASGTDEYGTATEA 306

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      D+     I +D F RTT     +  +  + KI  +G + 
Sbjct: 307 KALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTTTPEQTEIVQAFFLKIKSQGYVL 366

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQ-----------YYNAQHNPVQWMEEEG----- 164
                  +    + +  D  V     G                  N V+ +         
Sbjct: 367 TETVEQLHCEFCDRFLADRFVEGTCPGCKYEDARGDQCDGCGHLVNAVELINPRCKICNT 426

Query: 165 --------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                    FF      ++ L  Y +          +    ++++ GLK   ++R    W
Sbjct: 427 RPVVKNSVQFFLDLPKLEEKLKEYSATVYKGWSNVAKVVSKTWLRDGLKPRCITRD-LKW 485

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-----HVIGKDILR 269
           GI +P +     + YVW DA   Y++ T           +  P D        + KD + 
Sbjct: 486 GIPVPVEGFENKVFYVWFDAPFGYISITKRYTKEYKKWWQP-PQDTKVDLCQFMAKDNVP 544

Query: 270 FHAIYWPAFLL--SANLPLPKKVFSH--------------------------------GF 295
           FHAI +PA LL  + N  L + + +                                  +
Sbjct: 545 FHAIMFPACLLAVNQNYTLTRNILATGTISKECKSLGCIYFMTVFVSYFLCHLFRNISEY 604

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           + ++ +K SKS G  +   +  +  +  D  R++L       +D  ++   L  + N++L
Sbjct: 605 LNYEDKKFSKSRGIGVFGTDARDTGIPADVWRFYLAYIRPETQDSTFNWVDLATKNNSEL 664

Query: 355 ANGIGNLVSRSV-----------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            N +GN V+R V               K +D  +P P    E+D ++L++  R L     
Sbjct: 665 LNNLGNFVNRFVVSQKLVMSRALVFCEKFFDSNVP-PLEAEEADWTVLALAQRELSSYIN 723

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAI 460
            M+   +   L  ++++    ++Y   Q+PW   K N D   +A TV+ +   +   L+ 
Sbjct: 724 AMEQAKLRDGLRHILAISKHGNQYMQFQQPWVKIKGNDDDKKKAGTVVAICCNLACLLSA 783

Query: 461 LLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTFDPIFPRF 510
           LL  F+P +A ++   L ++++N  +  + +   L     + K   P+F + 
Sbjct: 784 LLAPFMPNVAKQLRSQLGLSNKNYGYIPEKITNMLPTWHKIGKP-SPLFTKI 834


>gi|289616526|emb|CBI56691.1| unnamed protein product [Sordaria macrospora]
          Length = 671

 Score =  260 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 115/569 (20%), Positives = 207/569 (36%), Gaps = 64/569 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +E + I++A+ Y N  PH+G+    ++ ADV ARF R  GL  L+  G+DE+G     
Sbjct: 12  EGKENILITSALPYVNNVPHLGNIIGSVLSADVFARFCRARGLPTLYVCGSDEYGTATET 71

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A + GV       +     +D+ D   IS+D F RT    H    + ++ ++   G I 
Sbjct: 72  KALSEGVDPATLCAKYHALHKDVYDWFRISFDKFGRTPTDEHTGITQEIFAQLWKNGFIE 131

Query: 121 KGCYSGWYSLRDEA------YYNDDEVYKGAD----GQYYNAQHNPVQWMEE-EGYFFRL 169
           +   +  +    E        Y + E     D    G   +A  N +  M+  +      
Sbjct: 132 ERETTQAFCAVPEHNTFLADRYVEGECSICHDLGARGDQCDACGNLLDPMQPDKNAAGED 191

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL------------------------- 204
            +     L       +   P  R+ + +      L                         
Sbjct: 192 ESKGTGWLINPRCKLDGSTPERRKTKHLYIRLDELNKEITAWLDRVENGWSANCVAITRS 251

Query: 205 ---------KDLSLSRKTFDWGIKIPDDPQY---IMYVWIDALTNYLTTTGYLDN----- 247
                         S+  F  G++   D +Y   + YVW DA   Y + T    +     
Sbjct: 252 WINNGLKPPWYHERSQVGFPKGLEGLSDEEYANKVFYVWFDACIGYASITKCYTDEGNLE 311

Query: 248 -PDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGE 301
             +  K    P ++     +GKD + FH I +P   L           + +  ++ ++G 
Sbjct: 312 GRNWEKWWKNPNNVTLYQFMGKDNVPFHTIIFPGTQLGTKEKWTQVNHLSTTEYLNYEGG 371

Query: 302 KISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           K SKS G  +      +  +  D  RY+L+       D  +  +      N DL   +GN
Sbjct: 372 KFSKSKGVGVFGNNARDTGIDPDVWRYYLLSRRPESGDSEFKWEEFIDSNNNDLLKNLGN 431

Query: 361 LVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L  R V       D  +P  P     S +      +++L+E  E ++   +   LA V+S
Sbjct: 432 LCQRVVKFCQAKLDAKVPAYPATPIASLDEYKEEINKLLKEYNEQVKGTKLRAGLATVLS 491

Query: 420 LVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +    ++     K   +L    P+R + V+   + ++  +A +L  ++P  A  I   + 
Sbjct: 492 ISGVGNKLLQDNKLSNQLLTEEPERCNAVINFALNLLHLIAGVLTPYMPGTAQSILRQIG 551

Query: 479 V-ADENRCFQSLDQRLKPGFMLHKTFDPI 506
           + A E      +         + K  +PI
Sbjct: 552 LKAAEGETDIPVVIPDTWNPDILKAGEPI 580


>gi|255513959|gb|EET90224.1| methionyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 552

 Score =  260 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 112/549 (20%), Positives = 219/549 (39%), Gaps = 50/549 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + +K  +++A+ Y  A PH+G+    ++ ADV  ++ ++ G D +F  G+D+HG  I 
Sbjct: 1   MNKTQKFIVTSALPYAEAVPHLGNFVGSILPADVYFKYLKMKGEDAIFICGSDQHGTPIE 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A  AG+T     ++     + + +    ++  + +T  + +  T   +++ +   G I
Sbjct: 61  LKAIKAGITPDRLSNEVHEKIKKVMERSGCTFTYYGKTHSESNKLTVYEIFESLRKNGYI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +   +  Y   D+ + +D  +            +G   +      +P + +E       
Sbjct: 121 IETEDTQAYCSVDDRFLSDRFIIGTCPYCGYSDARGDQCENCGHLLSPQELIEPYCAVCG 180

Query: 169 LSAYQDKLLSYY---------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
               + +                    ESH          N+ +S+++ GLK   ++R  
Sbjct: 181 NKKLEFRKTKNLALDLEALSGEIKAFVESHKHNNWTKNAINKTLSYLEQGLKPRDITR-N 239

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
             WG  +P         YVW DA+  Y+  T              P    +  +GKD L 
Sbjct: 240 IKWGFPVPLKGFEDKAFYVWFDAVIGYIGITREWSESQYLNYWKDPDTKLIQFMGKDNLE 299

Query: 270 FHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           FH + WP  L+ A      P  +    ++  KG K SKS G  ++    +E +  D  R+
Sbjct: 300 FHTMMWPGILIGAGREYVLPHTIKVFEYLNAKGVKFSKSKGVGLNMEGAVELLPSDYWRF 359

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+  +    D  +  +   + VN  + + IGNLV+R +++   +   +     +  E D
Sbjct: 360 ALMYLLPETSDTDFSIEEFIEIVNKVMNDKIGNLVNRVLTIYGANRGII-----SGEEDD 414

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK----TNPDR 443
            + +S    ++ E         +  AL +VI L    +    + +PW+L K     +   
Sbjct: 415 AASISKARSIISEYIAEFDAINMRNALHKVIELSELGNEVMSSTEPWKLAKAGDANSKRE 474

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSLDQRLKPGFMLHK 501
            S ++    +++  L I+L  F P  A+KI D   +    E +  +++     P    +K
Sbjct: 475 FSKIMVSLRQIVYDLGIMLWPFAPDAASKILDYFGMDGQPEIKMLENV-----PDIDTNK 529

Query: 502 TFDPIFPRF 510
               IF + 
Sbjct: 530 PPKAIFSKI 538


>gi|297605899|ref|NP_001057729.2| Os06g0508700 [Oryza sativa Japonica Group]
 gi|255677088|dbj|BAF19643.2| Os06g0508700 [Oryza sativa Japonica Group]
          Length = 727

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 91/498 (18%), Positives = 197/498 (39%), Gaps = 56/498 (11%)

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + K   D+      ++    DI +D F RT+  +  + C+ +++K+ +   + + 
Sbjct: 1   MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN 60

Query: 123 CYSGWYSLRDEAYYNDD-------------EVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                Y    + +  D              E  +G   +  +   NP + ++ +    + 
Sbjct: 61  TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN 120

Query: 170 SA-------------YQDKLLSYYESHPEF--ILPIERRNEVISFVKSGLKDLSLSRKTF 214
           +                   L  Y +      +          +++K GLK   ++R   
Sbjct: 121 TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRD-L 179

Query: 215 DWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P +     + YVW DA   Y++ T           K  P ++     +GKD + 
Sbjct: 180 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKD-PDNVELFQFMGKDNVP 238

Query: 270 FHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALR 326
           FH + +P+ LL         K +    ++ ++  K SKS G  +   +  +  +  +  R
Sbjct: 239 FHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVWR 298

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT--P 380
           Y+L+       D  +    L+ ++N++L N +GN ++R +S + K     YD ++P    
Sbjct: 299 YYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPN 358

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                  ++++   ++ +++  E M+   + + L   + + S+ + Y    + W+L K +
Sbjct: 359 AESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKED 418

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLK----- 494
           P   + V+  +V V+  LA LL+ F+P  +N++   L +  +E+  F      +      
Sbjct: 419 PAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKRP 478

Query: 495 -----PGFMLHKTFDPIF 507
                 G  + K   P+F
Sbjct: 479 WDFVSAGHKIGKP-SPLF 495


>gi|153005309|ref|YP_001379634.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028882|gb|ABS26650.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 694

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 127/552 (23%), Positives = 207/552 (37%), Gaps = 58/552 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+L +++A+ Y N   H+GH  E I  DV  R+ R  G  V +    D HG  I   A  
Sbjct: 3   ERLLVTSALPYANGSIHLGHLVEYIQTDVYVRYRRACGDHVTYVCAADSHGTPIEVNAAK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           AG+T K FV++      D      + +  +  T    +      ++  +  KG IYK   
Sbjct: 63  AGMTPKAFVEKYRGEQHDDFRRFGVEFSTYYTTDSPENARWAYRIYDALKAKGLIYKRSI 122

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEEEG------YFF 167
              Y   D  +  D  V             G   +     ++P    +            
Sbjct: 123 EQLYCEHDRRFLPDRFVKGTCPKCGARDQYGDVCEVCGTTYDPRDLKDPRCAICGSAPVV 182

Query: 168 RLSAYQDKLLSY-------YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           R S +    L         +      + P  R  E +    + L+D  ++R    +G  +
Sbjct: 183 RSSDHAYVDLKKAEEVIRGWVEAEGHLEPAVR--EQVKGWLADLQDWCITRDAPYFGFPV 240

Query: 221 PDD--PQYIMYVWIDALTNY-LTTTGYLDNPDGSKAKFWPADL--------------HVI 263
            D   P   +YVW+DA   Y  +   Y      +  +  PA+               H I
Sbjct: 241 KDPDFPGKFLYVWVDAPIGYLSSAEHYFAEEAPAGERLSPAEFERRYLAEGAGARLEHFI 300

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGV 322
           GKDILRFHA++WPA L +A L  P ++  HG +   GEK+SK+ G+ I         +  
Sbjct: 301 GKDILRFHAVFWPAMLWAAGLKRPDRMPVHGHLTVNGEKMSKTRGSFITARTYLDAGLDP 360

Query: 323 DALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           + LRYF         +D     D  + RVNADLAN + NL SR  +++ +    +   P 
Sbjct: 361 ELLRYFYAANLGPSVQDLDLALDEFRNRVNADLANNVANLASRVAALVPRAGAPLAERPE 420

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                  +++ V    L   R   +       +     +    ++     KPWE   +  
Sbjct: 421 P------ALVEVARSALAAARLAYRALEYREVVRAANQVADRCNKRMQEAKPWEDPASPA 474

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            RA  +L+   + +R +A +L   +P+    +          R  +  D     G ++  
Sbjct: 475 SRA--LLFSCAKSLRAIATILWPVMPRFCGDLAAAFGQERPERWDEDFD-PFAGGPVVVA 531

Query: 502 TFDP----IFPR 509
              P    + PR
Sbjct: 532 AKPPQIARLDPR 543


>gi|297625905|ref|YP_003687668.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921670|emb|CBL56227.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 559

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 128/487 (26%), Positives = 199/487 (40%), Gaps = 54/487 (11%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G DVL  +G+DEHG  I   A   G+T +   D+  R   +    L +SYD + RTT   
Sbjct: 3   GNDVLLVSGSDEHGTAIQVKADAEGLTAQETADKYHRIIVEDLQGLGLSYDLYTRTTTLN 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYSG-----------WYSLRDEAYYNDDEVYKGADGQYY 150
           H    + +++ + D G I +    G              +         E  +G      
Sbjct: 63  HEAVTQEVFRTLYDNGYIIEKTQLGAISPSTGRTLADRYIEGTCPICGYEFARGDQCDNC 122

Query: 151 NAQHNPVQWMEE------------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
             Q +P+  +              E   F L             +          N   +
Sbjct: 123 GNQLDPIDLINPHSRIDGEVPDFVETTHFFLDLPALAEELMTWLNSRKDWRPNVLNFSYN 182

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNP--DGS 251
           F K  LK  +++R   DWGI IP     +D    +YVW DA+  YL+ +        D  
Sbjct: 183 FAKE-LKPRAITRD-LDWGIPIPVEGWENDDMKRIYVWFDAVIGYLSGSIEWARRTGDPD 240

Query: 252 KAKFWPAD-----LHVIGKDILRFHAIYWPAF---------------LLSANLPLPKKVF 291
             K W  D      + +GKD + FH++ WP+                     L LP +V 
Sbjct: 241 AWKAWWQDPEARSYYFMGKDNIVFHSVIWPSMLLGLNGEGSRGGTPSKWLGKLDLPTEVV 300

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           S  F+  KG K+  S G VI   + + E G D LRY++       KD  +  D   +R N
Sbjct: 301 SSEFLTMKGSKVDTSHGVVIYVGDFLREFGPDTLRYYIAVAGPENKDTDFTWDEFVRRNN 360

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            +LAN  GNLV+RS+SM  K+ +G IP        D  +L+        + + ++     
Sbjct: 361 NELANEWGNLVNRSLSMAFKN-NGEIPPAHELLNVDAELLASSKAAFITVGKLIEECKFK 419

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+ + + +V+  ++Y   Q+PW+L   + DR  TVL   ++V+     LL  F+P  A 
Sbjct: 420 AAITEAMRVVATANQYISQQEPWKL-GDDTDRRDTVLNTALQVVSDANTLLTPFMPHSAQ 478

Query: 472 KIFDILF 478
           KIF++L 
Sbjct: 479 KIFEMLG 485


>gi|296421294|ref|XP_002840200.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636414|emb|CAZ84391.1| unnamed protein product [Tuber melanosporum]
          Length = 817

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 103/548 (18%), Positives = 202/548 (36%), Gaps = 65/548 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I+ A+ Y N  PH+G+    ++ AD  +R+ +    + L+  GTDE+G    
Sbjct: 230 VPGERNVLITAALPYVNNVPHLGNIVGSVLSADAFSRYAKARNYNTLYICGTDEYGTATE 289

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +                            +K + +  + ++  +     +
Sbjct: 290 TKALEEGITPRAL-------------------------CDKYNTEIAQDIFLNLQKNDLL 324

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQ---------HNPVQWMEE 162
            +   +  +  + + +  D  V        Y+ A G   +            NP   ++ 
Sbjct: 325 VEESMTQLFCEKHQGFLADRFVEGTCPKCGYEDARGDQCDTCGLLLDPFELINPRCKLDG 384

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKT 213
            G   R S +    L   +   E  +                  S++K+GLK   ++R  
Sbjct: 385 TGPIKRDSKHIFIQLDKLQPEIEEWVSKASEEGQWSKNGRIITESWLKTGLKPRCITRD- 443

Query: 214 FDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--LHVIGKDILR 269
             WG  + +P     +MYVW DA   Y++ T           K          +GKD + 
Sbjct: 444 LTWGTPVPVPGYEDKVMYVWFDACIGYVSITANYTKEWEKWWKNKDEVKLYQFMGKDNVP 503

Query: 270 FHAIYWPAFLL---SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
           FH + +P   +     N  +   + +  ++ ++G K SKS G  +      +  V     
Sbjct: 504 FHTVVFPGSEIGTREGNWTMLHHISTTEYLQYEGGKFSKSRGVGVFGNNARDTGVPPSVW 563

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAF 383
           RY+L+       D  +       + N++L   +GN V+R +  I   Y G++P    G  
Sbjct: 564 RYYLLSSRPETGDTQFVWQDFATKNNSELLANLGNFVNRLIKFINAKYAGVVPDYTIGIN 623

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPD 442
             S        + +L+   E ++N  I   L + +++  E +R+    K    L   +P 
Sbjct: 624 DISFGQYKESVNALLKSYIEELENVHIRAGLERAMAISGEGNRFLQDNKLDNALFTNSPK 683

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           +A+ V+   + +I  L+ L+  ++P  +  I   L     +         L PG ++   
Sbjct: 684 KAAAVVGFGINLIYLLSALIYPYMPATSESIVKQLNAPHRSIPDVWDVDGLLPGHVIG-R 742

Query: 503 FDPIFPRF 510
            + +F R 
Sbjct: 743 AEYLFSRI 750


>gi|313793399|gb|EFS41457.1| methionyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313810333|gb|EFS48049.1| methionyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313814707|gb|EFS52421.1| methionyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313838090|gb|EFS75804.1| methionyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314914475|gb|EFS78306.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314917799|gb|EFS81630.1| methionyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314957045|gb|EFT01151.1| methionyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957660|gb|EFT01763.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314972967|gb|EFT17063.1| methionyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314975484|gb|EFT19579.1| methionyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314986026|gb|EFT30118.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314988809|gb|EFT32900.1| methionyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315086970|gb|EFT58946.1| methionyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089895|gb|EFT61871.1| methionyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327325339|gb|EGE67144.1| methionine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327443770|gb|EGE90424.1| methionyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327449166|gb|EGE95820.1| methionyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327451348|gb|EGE98002.1| methionyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|328755046|gb|EGF68662.1| methionyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328755907|gb|EGF69523.1| methionyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328761055|gb|EGF74606.1| methionine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 554

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 123/489 (25%), Positives = 212/489 (43%), Gaps = 58/489 (11%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G  VL  +G+D HG  I+  A   GVT +   ++  R        L +SYD +  T    
Sbjct: 3   GHRVLMVSGSDCHGTAISVKADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDN 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNP 156
           H D  + ++ ++ + G + K    G +           Y        G D    +   N 
Sbjct: 63  HADVTQEIFTRLHENGYVVKRSEMGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNC 122

Query: 157 V--------------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
                                ++ E E +F  L A  + L S+ ++  ++   + + +  
Sbjct: 123 GRQLDPADLIDPRSKTTGAAPEFRETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHN 182

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKI-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--D 249
           +      L+  +++R   DWGI++      D+P   +YVW DA+  YL+ +         
Sbjct: 183 LL---EELRPRAITRD-LDWGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGR 238

Query: 250 GSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN---------------LPLPKK 289
               + +  D      + +GKD + FH++ WP  LL  N               L LP +
Sbjct: 239 PDAWREFWNDEDARSYYFMGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTE 298

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + S  F+   G K+S S G  I   + + E G DALRYF+       +D  +  +   +R
Sbjct: 299 IVSSEFLTMSGSKVSNSRGATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRR 358

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           VN +LAN  GNLV+RS+SM  K+    IP  G  T++D  +L   +     +   + +  
Sbjct: 359 VNFELANEWGNLVNRSISMAFKNC-HEIPAAGELTDADRELLDAAATGFDTVGGLLAHAR 417

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              A+ + + +V   + Y  A++PW+L K NP+R  TVL+V ++V+  +  ++  F+P  
Sbjct: 418 FKAAITEAMRIVGLANAYISAEEPWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHS 476

Query: 470 ANKIFDILF 478
           A KI++ L 
Sbjct: 477 AQKIYEALG 485


>gi|313828253|gb|EFS65967.1| methionyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 554

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 123/489 (25%), Positives = 212/489 (43%), Gaps = 58/489 (11%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G  VL  +G+D HG  I+  A   GVT +   ++  R        L +SYD +  T    
Sbjct: 3   GHRVLMVSGSDCHGTAISVKADQEGVTAQECAEKYHRIIAAGLQGLGLSYDLYTSTLTDN 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNP 156
           H D  + ++ ++ + G + K    G +           Y        G D    +   N 
Sbjct: 63  HADVTQEIFTRLHENGYVVKRSEMGAFEPSTGRTLPDRYIEGTCPVCGYDDARGDQCDNC 122

Query: 157 V--------------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
                                ++ E E +F  L A  + L S+ ++  ++   + + +  
Sbjct: 123 GRQLDPADLIDPRSKTTGAAPEFRETEHFFLDLPALAESLASWIDTRTDWRPNVLKFSHN 182

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKI-----PDDPQYIMYVWIDALTNYLTTTGYLDNP--D 249
           +      L+  +++R   DWGI++      D+P   +YVW DA+  YL+ +         
Sbjct: 183 LL---EELRPRAITRD-LDWGIRVPVEGWQDNPMKSIYVWFDAVIGYLSASIEWARRIGR 238

Query: 250 GSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN---------------LPLPKK 289
               + +  D      + +GKD + FH++ WP  LL  N               L LP +
Sbjct: 239 PDAWREFWNDEDARSYYFMGKDNIVFHSVIWPGILLGTNGRGDKGGEPSEELGTLNLPTE 298

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + S  F+   G K+S S G  I   + + E G DALRYF+       +D  +  +   +R
Sbjct: 299 IVSSEFLTMSGSKVSNSRGATIFVGDFLHEFGPDALRYFIAVAGPENQDTDFTWEEFVRR 358

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           VN +LAN  GNLV+RS+SM  K+    IP  G  T++D  +L   +     +   + +  
Sbjct: 359 VNFELANEWGNLVNRSISMAFKNC-HEIPAAGELTDADRELLDAAATGFDTVGGLLAHAR 417

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              A+ + + +V   + Y  A++PW+L K NP+R  TVL+V ++V+  +  ++  F+P  
Sbjct: 418 FKAAITEAMRIVGLANAYISAEEPWKL-KDNPERRDTVLHVALQVVSDVNTMMTPFMPHS 476

Query: 470 ANKIFDILF 478
           A KI++ L 
Sbjct: 477 AQKIYEALG 485


>gi|260577804|ref|ZP_05845738.1| methionine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258604031|gb|EEW17274.1| methionine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 574

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 139/558 (24%), Positives = 227/558 (40%), Gaps = 91/558 (16%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G +VL  +GTDEHG  +   A+  G T +   D+ +R   +    L +SYD F RTT + 
Sbjct: 3   GNEVLMVSGTDEHGTPLLVQAEKEGTTVQELADRYNRIIVEDLASLGLSYDLFTRTTTRN 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQHNP 156
           H+   + L+  + + G +      G  S          Y        GA+    +   N 
Sbjct: 63  HYAVVQELFTGLYNNGYMVTQTTRGAISSSTGRTLPDRYIEGTCPICGANDARGDQCDNC 122

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----------ILPIERRNEVISFVKSGLK 205
              ++ E      S    +   + ++                    R +   + +K  L 
Sbjct: 123 GNQLDPEDLIDPRSKINGETPEFIDTEHFMLDLPALAEALTTWLKGRTDWRPNVLKFSLN 182

Query: 206 DLSLSRKT-----FDWGIKIPDDPQ-----YIMYVWIDALTNYLTTTGYLDNP--DGSKA 253
            L   R        DWG+ IP +         +YVW DA+  YL+ +        D    
Sbjct: 183 LLEDIRPRAMSRDIDWGVPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAWRIGDPDAW 242

Query: 254 KFWPAD-----LHVIGKDILRFHAIYWPAFLLSAN----------------LPLPKKVFS 292
           + W  D      + +GKD + FH+  WPA LL                   L LP +V S
Sbjct: 243 RKWWNDPEALSYYFMGKDNITFHSQIWPAELLGYGGQGSKGGEAGDLADPALNLPTEVVS 302

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             F+   G K S S G VI   + ++E G DALRYF+        D  +  D   +R+N+
Sbjct: 303 SEFLTMSGSKFSSSKGVVIYVRDFLKEFGPDALRYFIATAGPETTDTDFTWDEFVRRINS 362

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +LAN  GNLV+R+VSM  K++   +PTPG  T  DE++L+  ++  + + +N+       
Sbjct: 363 ELANEWGNLVNRTVSMAHKNFG-EVPTPGPLTAEDEALLAESAKAFEVVGDNINLSRFKA 421

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            + + + +    ++Y  A +PW+L K     +R +TVLY  ++V+  +  LL  ++P  A
Sbjct: 422 GITEAMRIAGRANQYIAAMEPWKLAKDEDQRERLATVLYTALQVVSDVNTLLTPYLPFSA 481

Query: 471 NKIFDILF--------------------------VADENRCFQSLD------------QR 492
            KIF+ L                           + +E R +  +             Q 
Sbjct: 482 QKIFETLGGEGIWAAQPEVVEVKDESPRQPVGMGLPEEGRTYPVIMGDYTKQKATWARQE 541

Query: 493 LKPGFMLHKTFDPIFPRF 510
           ++PG  L K   P+FP+ 
Sbjct: 542 IQPGTKLSKP-KPLFPKL 558


>gi|218461098|ref|ZP_03501189.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 272

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 166/272 (61%), Positives = 218/272 (80%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M ++   YI+TAI+YPN +PHIGHAYE+I  D +AR+ RLDG DV F TGTDEHGQK+ +
Sbjct: 1   MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARYQRLDGKDVFFLTGTDEHGQKMQQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+  G+  +   D+NS  F+ MA +L+ S DDFIRTT++RHH+T R +WK ++D GDIY
Sbjct: 61  TARAEGIEPQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K  Y+GWYS+RDEAYY ++E    ADG  Y  Q  PV+W+EE  YFF+LS YQ+KLL++Y
Sbjct: 121 KDSYAGWYSVRDEAYYQENETELRADGVRYGPQGTPVEWVEEASYFFKLSEYQEKLLAHY 180

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E++P+FI P ERRNEVISFVKSGLKDLS+SR TFDWGIK+P+DP ++MYVW+DALTNY+T
Sbjct: 181 EANPDFIGPAERRNEVISFVKSGLKDLSVSRTTFDWGIKVPNDPSHVMYVWVDALTNYIT 240

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
            TGY+++ +G +AK+WPAD+H+IGKDI+RFHA
Sbjct: 241 ATGYIEDRNGPRAKYWPADVHIIGKDIIRFHA 272


>gi|311978039|ref|YP_003987159.1| methionyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|82000411|sp|Q5UR82|SYM_MIMIV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55417250|gb|AAV50900.1| methyonyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204961|gb|ADO18762.1| methionyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 550

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 108/522 (20%), Positives = 211/522 (40%), Gaps = 54/522 (10%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +K ++++A+ YPN   PH+G+    ++  DV ARF R  G +V++  GTDE+G      A
Sbjct: 2   QKFFVTSALPYPNNSSPHLGNLVGALLSGDVYARFKRNQGHEVIYLCGTDEYGTTTMIRA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +  GVT +   D+     + + D  +I +D F RT+  +  +    ++  + + G I + 
Sbjct: 62  RKEGVTCRELCDKYFELHKKVYDWFNIEFDVFGRTSTTKQTEITWEIFNGLYNNGYIEEK 121

Query: 123 CYSGWYSLRDEAYYND------------DEVYKGADGQYYNAQHNPVQWMEEEGYFF--- 167
                +  + + Y  D             E    ++G         +   +    F    
Sbjct: 122 TTVQAFCEKCDMYLADTYLKGYCYHDGCRENRVISNGDQCEICQKMIDVNKLINPFCSIC 181

Query: 168 ------RLSAYQDKLLSYYESHPEFILPIERRNEVIS-----FVKSGLKDLSLSRKTFDW 216
                 + + +    L       +  L     +  I      +++ GL    ++R   +W
Sbjct: 182 LTPPIQKSTDHLYLSLDKLTPLVQQYLDRVEFDSRIMAISKAWLEIGLNPRCITRD-LEW 240

Query: 217 G--IKIPDDP------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           G  I I  DP        + YVW DA   Y +      +            +    KD +
Sbjct: 241 GTPIPINLDPKLEKYADKVFYVWFDAPIGYYSILANERDDWREWLNSGVTWVSTQAKDNV 300

Query: 269 RFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIE-----EVG 321
            FH+I +PA ++ +N+ LP   ++    ++L++G+K SKS G  +   +V E      + 
Sbjct: 301 PFHSIVFPASVIGSNIELPLIDRICGTDYLLYEGQKFSKSQGVGLFGDKVAEISPKLGIN 360

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R++L++     +D  ++ +   + V  DL N IGN ++R  S++ K          
Sbjct: 361 EDYWRFYLMKIRPETQDSSFNLEEFVRIVKTDLVNNIGNFINRVFSLLEK---------T 411

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            + + +  I       +++   +M        L   + + S  +++  + KPW + K   
Sbjct: 412 PYRDLNYQISPEYIEFIKKYEVSMDEFKFRDGLKICLEMSSRGNKFVQSTKPWTMIKDGL 471

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           D    ++   V +   L  LL+  +PK A  +   L   ++N
Sbjct: 472 D-TQEIMTEAVGICWILLNLLKPIIPKSACDMLSNLDTDNQN 512


>gi|19074889|ref|NP_586395.1| METHIONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697495|sp|Q8SQW5|SYMC_ENCCU RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
 gi|19069614|emb|CAD25999.1| METHIONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 550

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/535 (19%), Positives = 205/535 (38%), Gaps = 43/535 (8%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K +I++A+ Y N QPH+G+    ++  DV +R+ +  G   ++  GTDE+G  I   A +
Sbjct: 2   KKFITSALPYVNNQPHLGNIIGSVLSGDVYSRYCKKKGEVSVYICGTDEYGTAIEMEAIS 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GVT     ++N +  + + D  +I +D F  T+   H    + L+ K+ D G   +   
Sbjct: 62  QGVTPLEICEKNRKLHKQVYDWFNIDFDYFGFTSSATHTGLVQDLFMKMYDNGHFSEVEI 121

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             +Y      +  D  +            +G         +N ++ +         S   
Sbjct: 122 EQFYCEHCGLFLADRFIVGECKFCGDGRARGDQCDSCGHTYNSLELLSPRCSICSSSPVV 181

Query: 174 -------------DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-TFDWGIK 219
                           L         +     +N    ++        ++R   F+WG+ 
Sbjct: 182 RATTHLFFDLEAFRPSLEELYRTNGHLWSQNAQNIFRQWISMEFYPRCMTRDLKFNWGVP 241

Query: 220 IPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +P +   + + YVW DA   YLT    L   D  +       +  +GKD + FH + +PA
Sbjct: 242 VPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFGEWCKDAELVQFMGKDNVAFHTVIFPA 301

Query: 278 FLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD--ALRYFLVREI 333
            L +     P  +++ +  ++  + EK SKS  + I  ++++          RY+L++  
Sbjct: 302 MLYATGEKYPVVRRLSATEYLQFENEKFSKSRRHGIFGLDLVGGGLGKSCMWRYYLLKIR 361

Query: 334 AC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               KD  +     ++ V ADL N +GN V+R +  I    +    +       D+  + 
Sbjct: 362 PESTKDSNFTFSDFRQSVTADLINNLGNFVNRVLKYIQSKCN-SRVSLLELDSGDKKCIE 420

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + +  + +  M+   +  AL  V+ +    + Y            + DR      +  
Sbjct: 421 DVNELYCKYKAKMEEIKLREALQVVMEICRRGNEYIQEGVR------SRDRKGHFFCLGF 474

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
            +I  +  LL  F+P  + +I  +  + +          R+  G  +     P+F
Sbjct: 475 SIIGLVGTLLHPFIPVTSLEILRMCNLEETMFPESM---RIVDGHTMGSDIRPLF 526


>gi|256078304|ref|XP_002575436.1| methionine-tRNA synthetase [Schistosoma mansoni]
 gi|238660675|emb|CAZ31669.1| methionine-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 593

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 116/556 (20%), Positives = 215/556 (38%), Gaps = 88/556 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + I++A+ Y N  PH+G+     + A+V A +  L G +VL   GTDE+G      A 
Sbjct: 49  RNVMITSALPYVNNVPHLGNMIGSTLSANVFALYCDLAGYNVLSICGTDEYGTATEAKAV 108

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           +  +T +   D+  +   D+     I +D F RTT  +H +  + ++K++ DKG I +  
Sbjct: 109 SENMTPRQICDKFHKLHCDIYKWFQIEFDYFGRTTTDQHTEIVQEVFKRLWDKGFITEDS 168

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFF----- 167
               Y  +   +  D  V            +G          N V+ +E           
Sbjct: 169 VEQLYCEKCSKFLADRFVEGVCPLCKYHDARGDQCDKCGRLMNAVELIEPRCKMCSQKPV 228

Query: 168 -RLSAYQDKLLSYYESHPE-----------FILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            R S +    L   E+               +          S+++ GLK   ++R    
Sbjct: 229 VRSSRHLFLDLPKIENKLNTFVEQRINDSSCVWTSNACTISSSWLRDGLKPRCITRD-LH 287

Query: 216 WGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDI 267
           WG+ +P +     + YVW DA   Y++ T         K  + P+D         + KD 
Sbjct: 288 WGVPVPLEAYKDKVFYVWFDATIGYMSITANYTKHW--KQWWQPSDNNEIELFQFMAKDN 345

Query: 268 LRFHAIYWPAFLL--SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDA 324
           + FHAI +PA LL   A   L K + S  ++ ++  K SKS G  +   + ++  V  D 
Sbjct: 346 VPFHAIVFPACLLAADAGYTLVKHLLSTEYMNYENTKFSKSRGIGVFGDDAMKSGVISDV 405

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R++L+                                  S+S + + ++ +IP+     
Sbjct: 406 WRFYLL----------------------------------SLSFVSRFFNSIIPSITKLE 431

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPD 442
             D   L+  +++      NM++  +  A+  V+++    + YF A +PW   K     +
Sbjct: 432 PVDTEFLARINKLFATYIHNMESCHLRDAIRNVLTIARLGNGYFQANQPWVAVKKPETKE 491

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQR-------LK 494
           R+  V+ V   +   L  ++  F+P +  +I+ +   +      F  + +        L 
Sbjct: 492 RSGVVISVAANIACLLGAMIYPFMPTIGKQIWIEQCDLPISQMSFVQIIKNEFTVTRLLP 551

Query: 495 PGFMLHKTFDPIFPRF 510
            G  + K   P+F + 
Sbjct: 552 DGHHIGKPV-PLFRKI 566


>gi|227494721|ref|ZP_03925037.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831721|gb|EEH64104.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 564

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 127/500 (25%), Positives = 212/500 (42%), Gaps = 52/500 (10%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G DVL  +GTDEHG  I  AA   G+T +   D+N+R   +    L +SYD F RTT 
Sbjct: 1   MQGHDVLMVSGTDEHGTPILVAADGKGITPRQLADENNRLIVEDLVQLGLSYDLFTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSG-----------WYSLRDEAYYNDDEVYKGADGQ 148
             H+   + +++ + D G +      G              +        D   +G    
Sbjct: 61  GNHYQVVQAMFEVVRDNGYMLVQTTHGAISPSTGRTLPDRYIEGTCPICGDPGARGDQCD 120

Query: 149 YYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
               Q +P                ++E + YF  L      L ++ +   +         
Sbjct: 121 SCGNQLDPTDLINPVSRINGETPKFIETDHYFLDLPGLAGALSAWLDDREKSGTWRPNVI 180

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNP--D 249
           +        ++  +++R   DWGI +P   D P   +YVW DA+  YL+ +        D
Sbjct: 181 KFSQNFLEDIRPRAMTRD-IDWGIPVPGWEDQPSKRLYVWFDAVVGYLSASIEWARRSGD 239

Query: 250 GSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLL--------------SANLPLPKKV 290
               + W  D      + +GKD + FH+  WPA +L                 L LP +V
Sbjct: 240 PEAWRKWWNDPEALSYYFMGKDNIVFHSQIWPAEILGYNGGGDKGGEPGPFGQLNLPTEV 299

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            S  F+  +G K + S G VI   +++     DALRYF+        D  +      +R 
Sbjct: 300 VSSEFLTMEGRKFASSRGIVIYVRDMLSRYQADALRYFISAAGPESSDADFTWAEFVRRT 359

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N++L  G GNLV+R+ SMI K +   IP PG   E D+++L+  +    E+ + +     
Sbjct: 360 NSELVAGWGNLVNRAASMINKRFG-EIPQPGQLEEIDQALLNQLADGFAEVGQLIGTHRQ 418

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
             A+A V+ LV E ++Y    +P++LK  +  +R +T+L+   + +  L  ++  F+P  
Sbjct: 419 KAAIAAVMRLVGEANKYVADTEPFKLKDPSQEERLATILWTLAQAVSDLNTMMSPFLPHS 478

Query: 470 ANKIFDILFVADENRCFQSL 489
           AN I  ++    E     S+
Sbjct: 479 ANAIDLVMGGTGELAPMPSI 498


>gi|319787562|ref|YP_004147037.1| methionyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466074|gb|ADV27806.1| methionyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 708

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 120/555 (21%), Positives = 199/555 (35%), Gaps = 59/555 (10%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++ A+ Y N   H+GH    I AD+  R  R  G  V +    D HG  I  AA+ AGV
Sbjct: 6   LVTNALPYANGPLHLGHLVGYIQADIWVRARRERGQTVHYVCADDTHGTPIMLAAEKAGV 65

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + F+               + +D +  T    +       +  +  +G I +      
Sbjct: 66  TPEAFIAATKAGHERDFQDFGVHFDWYHSTHSDENRALTERFYAALDARGSIERRSIEQL 125

Query: 128 YSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE-------------- 162
           Y      +  D  V             G + +   A + P   ++               
Sbjct: 126 YDPVKAMFLPDRYVKGTCPKCKSPDQYGDNCEACGATYGPTDLIDPRSAVSGATPELRAS 185

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E +FF+L  Y + L  +            +  E I   + GL+D  +SR    +G +IP 
Sbjct: 186 EHFFFKLGQYTEGLREWLRGDVALPGVKAKLAEWIE-GEGGLRDWDISRDAPYFGFEIPG 244

Query: 223 DPQYIMYVWIDALTNYLTT--------TGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
            P    YVW+DA   Y ++             +    +    P D     H IGKDI+ F
Sbjct: 245 HPGKYFYVWLDAPIGYFSSLLALARSGNKAGFDEAAMERLLQPGDHAELHHFIGKDIVNF 304

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFL 329
           H ++WPA L    L  P ++  +G++   G K+SKS G  I         +  DALRY+ 
Sbjct: 305 HGLFWPAVLEGNGLRKPDRLHVNGYLTVDGAKMSKSRGTFIMARTYLDVGLEPDALRYYF 364

Query: 330 V-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD- 387
             +      D   +      RVN+DL     N+ SR   ++   +  ++ TP A  +   
Sbjct: 365 ACKSSGGVDDLDLNLSDFVARVNSDLVGKFANIASRCARLLDVHFGNVLATPPALVDETG 424

Query: 388 ----------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                       +L+     ++   E              ++     + Y  A  PW L 
Sbjct: 425 DLSEGWAETARQLLANVRGRIETAPELYTEDNFAAVTRNAMAAADMANEYIAATAPWALA 484

Query: 438 KTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           K    RA    VL   ++    +A +L+  VP +  +    L          ++D+R+  
Sbjct: 485 KDPARRADLHLVLSTAIQAFADIAGVLKPIVPGIIARAEAWLGTT------LAVDRRIDL 538

Query: 496 GFMLHKTFDPIFPRF 510
                  + P+F R 
Sbjct: 539 AGRTVAAYTPLFTRI 553


>gi|256071351|ref|XP_002572004.1| methionine-tRNA synthetase [Schistosoma mansoni]
 gi|238657154|emb|CAZ28234.1| methionine-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 589

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 151/512 (29%), Positives = 242/512 (47%), Gaps = 40/512 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +  +I+  I Y NA+PH+GHAY   +AD  AR+  L     +      ++       
Sbjct: 52  RSEKPFFITCPIFYVNAKPHLGHAYTTCLADAWARYSCLR-NQPILKPFQQDYIASTYSP 110

Query: 62  AQNAGVTTKVFVDQNSRNF--RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             +     K F+   +     + +     + Y+DFIRTTE RH       W +++  G++
Sbjct: 111 VFDYCNLNKTFLSCGTDEHGSKTLCHATHVKYNDFIRTTETRHVKAVHEFWNRLNASGNV 170

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NPVQWMEEEGYFFRLSAYQDKLL 177
           Y+  YSGWY + DEA+Y   E+ + +      ++   NPV+W+EEE Y F+LS++++ L 
Sbjct: 171 YRSKYSGWYCVSDEAFYTPWEIDETSLSGVPVSKETGNPVEWIEEENYMFKLSSFKNDLH 230

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKD---LSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            + +S        +     ++    G      +S  +   DWGI +P D + I+YVW DA
Sbjct: 231 KWLDSGVFPKSSNQSVWCNMAHNMVGNSQDISISRPKSRSDWGIHVPGDNEQIVYVWFDA 290

Query: 235 LTNYLTTTGYLDNPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
           L NYLT TG+  +       K   WP D+  +GKDI+RFHA+ WPA L++ NLPLP+ + 
Sbjct: 291 LINYLTVTGFPWSNVNDGSFKQSLWPPDVQFLGKDIIRFHAVLWPALLMAVNLPLPRLLI 350

Query: 292 SHGFILHKGEKISKSLGNVIDP-------------IEVIEEVGVDALRYFLVREIACGKD 338
            H  +L    K+SKS GN +DP               VI     D LRY L+R      D
Sbjct: 351 CHHHVLVDNVKMSKSRGNQVDPIVEQSALLSDELNSNVITPAESDLLRYVLLRLPLLTYD 410

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD----YDGMIPTPGAFTESDESILSVC 394
           G Y ++  +K +N +L N IGNL+SR +S  L                   +D+S +   
Sbjct: 411 GTYSREMARKMINTELVNWIGNLLSRIISESLNPEQSIIQINRQQVDDMFYNDDSDMEFF 470

Query: 395 SRVLQEIRENMQNQ-----LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTV 447
              L  I  +           H+A+ +V+ ++ + + +     PW    T  +  R   +
Sbjct: 471 DN-LDNISHHFDKLWWYEAQPHKAIEEVLGIIRQTNEFITRHSPW----TERELLRRQFI 525

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L V  E +R  A+LLQ  +P L+ ++   L +
Sbjct: 526 LSVVSESLRICALLLQPVIPNLSIRLLHRLGI 557


>gi|159040724|ref|YP_001539976.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|187647711|sp|A8MA54|SYM_CALMQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157919559|gb|ABW00986.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 582

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 113/540 (20%), Positives = 226/540 (41%), Gaps = 42/540 (7%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  + +A  Y  A PH+G+    ++ ADV  R+ +L G DV+F TG+DEHG  I   A  
Sbjct: 16  RWVVGSAWPYIYAVPHLGNLIGSLLSADVFTRYLKLKGYDVVFVTGSDEHGTPIEVEAIK 75

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+  +   D+       +  +  I  D++ RT  + H    R  + KI + G I+    
Sbjct: 76  LGIEPRQLTDRMHEIIVKLLKLWGIEPDNYTRTESEVHKWYVRDAFTKIYNNGYIFTKDD 135

Query: 125 SGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              Y  RD+ +  D  V            +G   +       P   +  +      +   
Sbjct: 136 ELPYCPRDKIFLPDRFVIGTCPYCGYPYARGDQCENCGRLLEPRMLINPKCAICGSTPEW 195

Query: 174 DKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--K 219
                +Y                   LP   +   +  +K GL+  +++R    WGI   
Sbjct: 196 RLTRHWYLDLRRLEDRIRSYIEGNSALPDNAKQMSLGILKEGLRPRAITRDN-KWGIPAP 254

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPAD-----LHVIGKDILRFHA 272
            P      +YVW +A+  Y++ T             + +  +     +  IGKD + FH 
Sbjct: 255 FPGAEGKTIYVWFEAVLGYVSATIEYFRRLGREDDWRRFWFNKGTRVVFFIGKDNIPFHT 314

Query: 273 IYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I +PA L++      +P    S  +++ +G+K SKS    I   E I  +  D  R++L+
Sbjct: 315 IIFPALLMATGEDYVMPWTTSSTEYLIFEGKKFSKSQRVGIWADEAIALLPADYWRFYLI 374

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +  D     VN+ + + +GN + R +++  + +  + P      E D+ I
Sbjct: 375 YNRPEQRDSNFTWDSFLDVVNSIMNDTVGNFIHRVLTLAKRRWGTV-PGDVKMIEQDQEI 433

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                 +L  + E+ +  ++  A++Q I +    ++Y + ++PW L   +    ++ +Y+
Sbjct: 434 YGKVLEILNTVEEDYERIMLKDAVSQSIEIARIGNKYLNERQPWRL---SEVEFNSAIYM 490

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            + +++ L+I L   +P   N+++ ++  ++  R +    + ++ G  L +   P+F + 
Sbjct: 491 LMSIVKTLSITLAPVIPFSINELWRMMGYSNGLR-WGDARKPIEQGLRLSEP-KPLFRKI 548


>gi|226290706|gb|EEH46190.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 637

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 113/546 (20%), Positives = 220/546 (40%), Gaps = 67/546 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   LF  GTDE+G    
Sbjct: 10  VKGQRNILITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLFVCGTDEYGTATE 66

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   GVT +    + ++  +D+ +  +I +D F RT   +H    + ++K++ + G +
Sbjct: 67  TKALEEGVTPEELCAKYNKIHQDVYEWFEIGFDIFGRTPTAQHTQISQNIFKRLHENGFL 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF---- 167
            +      +  + +++  D  V        Y  A G   +   + +   + +        
Sbjct: 127 EEKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDG 186

Query: 168 -----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                R + +   LL   +   E            P   R    S++K GLKD  ++R  
Sbjct: 187 ATPVRRPTKHIHLLLDKLQPEIEEWVHPAIEKGNWPKNSRVITESWLKEGLKDRGITRD- 245

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD +
Sbjct: 246 LKWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNV 304

Query: 269 RFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDAL 325
            FH++ +P   +       K   + +  ++ ++  K SKS G  +      +  +  D  
Sbjct: 305 PFHSVIFPGTQIGTRDKWTKLYHLSTTEYLNYENGKFSKSRGIGVFGNNAKDTGIPPDVW 364

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFT 384
           RY+L++      D  ++        N +L   +GNLV+R V +I          P    T
Sbjct: 365 RYYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSVVPEFTVT 424

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E  E  L   + +L++    M++  +   L   + +V          +P      +P+  
Sbjct: 425 EQFEPALEEITALLRQYISEMESVHLRAGLVTAMKIV----------EP-----PSPNAQ 469

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR---------LKP 495
             V+ + V +I  ++ +   ++P  +  I   L V    R   SLD++         +KP
Sbjct: 470 PPVVGIVVNLIYLISSIFSPYLPATSASILAQLNVP--FRNIPSLDEQKEVGWRADLIKP 527

Query: 496 GFMLHK 501
           G  + K
Sbjct: 528 GHKIGK 533


>gi|299748517|ref|XP_001839197.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298408008|gb|EAU82630.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 516

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 142/491 (28%), Positives = 234/491 (47%), Gaps = 43/491 (8%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    GTDEHG KI +AA  A      F ++ S+ F+D++   +ISY  F RTT   H +
Sbjct: 15  VKLLVGTDEHGLKIQQAAAKASTEVLTFCNELSQVFKDLSKKANISYTTFSRTTGDNHKE 74

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQ 158
               +W+ + DKG IYKG Y GWYS+ DE +Y   ++ +                 + V+
Sbjct: 75  LVAQVWRTLLDKGYIYKGEYEGWYSITDECFYTSAQIVQSPTSTAENPEYVSKETGSKVE 134

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFI--------LPIERRNEVISFVKSGLKDLSLS 210
           W +E  Y FRLS ++D L+ +Y               L +    E  S V+     +S  
Sbjct: 135 WSKEYNYMFRLSMFRDALVKHYSDRSVVQPSQYNSVVLQMLGATEDSSGVELADISISRP 194

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
           R    WGI +P+DP++ +YVW DAL  YL+  GY  +   +    WP +L VIGKDILRF
Sbjct: 195 RSRLTWGIPVPNDPEHTVYVWFDALLIYLSGVGYQVSGPPA-VTGWPPNLQVIGKDILRF 253

Query: 271 HAIYWPAFLLSANLP-------------------LPKKVFSHGFILHKGEKISKSLGNVI 311
           HA+Y PA L++   P                   LPK + +H       +K+SKS+GNV+
Sbjct: 254 HALYLPAILMALGAPSHAALKDLSATQILEKSVGLPKTLLTHAHWTVSQQKMSKSVGNVV 313

Query: 312 DPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS--- 367
           DP++ +++ G+D +R++L R       D  +  + L+K  + +L + +GN + R  S   
Sbjct: 314 DPMQSVDKYGLDIVRFYLARVGGRFRDDVDWSFEQLEK-HSKELQSLLGNYLLRITSARI 372

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
                      +  +    +  +      + + ++E M N  +  AL+ ++ ++   ++ 
Sbjct: 373 TAAAAAGYEQQSEASPHALNLELAREVDALPRRVQELMNNLEVADALSSILDVLKLANKV 432

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
                PW  K  +P          ++ +R   I LQ FVP+ + ++ D L +A E+R ++
Sbjct: 433 ITDIAPWS-KTCSPALVYETRRTALDTLRVTGICLQPFVPETSERLLDALGLAPEDRTWR 491

Query: 488 SLDQRLKPGFM 498
           S+   L+P   
Sbjct: 492 SI---LEPAGK 499


>gi|323651382|gb|ADX97537.1| methionyl-tRNA synthetase [Courdo11 virus]
          Length = 546

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 116/509 (22%), Positives = 207/509 (40%), Gaps = 53/509 (10%)

Query: 6   KLYISTAIAYPNA-QPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K +I++A+ YPN   PH+G+    ++  DV ARF R    +V++ +GTDE+G      A+
Sbjct: 2   KYFITSALPYPNNASPHLGNLIGALLSGDVYARFKREQHHEVIYLSGTDEYGTTTMIKAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+     + + D  +I +D F RT+ ++  +    ++  +   G I +  
Sbjct: 62  QEGVTCRELCDKYFELHKKVYDWFNIQFDIFGRTSTEKQTEITHEIFTGLYHNGFIEEKN 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH---------------------NPVQWMEE 162
            +  Y    + Y  D  V       Y   ++                     NP   + +
Sbjct: 122 STQMYCDTCQLYLADTYVKGTCYHDYCQGKNIITNGDQCEICQHMIEVTKLINPFCSICK 181

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-----FVKSGLKDLSLSRKTFDWG 217
                R + +    L    +  E  L        ++     ++ +GL    ++R    WG
Sbjct: 182 TTPVIRNTQHLYLQLDKLTNQIENYLDKTNFKSSVNSVAKAWLNTGLTSRCITRD-LSWG 240

Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
             IP+            + YVW DA   Y +                   +   GKD + 
Sbjct: 241 TPIPNGIDDVIDKYSDKVFYVWFDAPIGYYSILANAKPDWREWLNSDVNWISTQGKDNIP 300

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-----EVGV 322
           FH I +PA +L +   LPL  ++ S  ++L++GEK SKS    +   +V++     ++  
Sbjct: 301 FHTIMFPASILGSGVKLPLINEICSTDYLLYEGEKFSKSNNCGLFGDQVMKISSELDITE 360

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L++     +D  ++       + +DL N IGNL++R  S++ K  D    T   
Sbjct: 361 DYWRFYLMKIRPETQDSSFNLKDFVTCIKSDLVNNIGNLINRYFSLV-KKLDVNEFTVDI 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             +  E I         E  + M N     AL   + +    ++Y    +PW+L  T+  
Sbjct: 420 PVDIIEYI--------TEYVDLMNNFKFREALKLCLKISDYGNKYIQTNRPWKLLSTDIK 471

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A  VL +   +   L  LL+ F+PK + 
Sbjct: 472 TAEHVLSIAGMICWILLSLLKPFIPKTSE 500


>gi|323651384|gb|ADX97538.1| methionyl-tRNA synthetase [Terra1 virus]
          Length = 546

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 116/509 (22%), Positives = 207/509 (40%), Gaps = 53/509 (10%)

Query: 6   KLYISTAIAYPNA-QPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           K +I++A+ YPN   PH+G+    ++  DV ARF R    +V++ +GTDE+G      A+
Sbjct: 2   KYFITSALPYPNNASPHLGNLIGALLSGDVYARFKREQHHEVIYLSGTDEYGTTTMIKAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GVT +   D+     + + D  +I +D F RT+ ++  +    ++  +   G I +  
Sbjct: 62  QEGVTCRELCDKYFELHKKVYDWFNIQFDIFGRTSTEKQTEITHEIFTGLYHNGFIEEKN 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH---------------------NPVQWMEE 162
            +  Y    + Y  D  V       Y   ++                     NP   + +
Sbjct: 122 STQMYCDTCQLYLADTYVKGTCYYDYCQGKNIITNGDQCEICQHMIEVTKLINPFCSICK 181

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-----FVKSGLKDLSLSRKTFDWG 217
                R + +    L    +  E  L        ++     ++ +GL    ++R    WG
Sbjct: 182 TTPVIRNTQHLYLQLDKLTNQIENYLDKTNFKSSVNSVAKAWLNTGLTSRCITRD-LSWG 240

Query: 218 IKIPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
             IP+            + YVW DA   Y +                   +   GKD + 
Sbjct: 241 TPIPNGIDDVIDKYSDKVFYVWFDAPIGYYSILANAKPDWREWLNSDVNWISTQGKDNIP 300

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-----EVGV 322
           FH I +PA +L +   LPL  ++ S  ++L++GEK SKS    +   +V++     ++  
Sbjct: 301 FHTIMFPASILGSGVKLPLINEICSTDYLLYEGEKFSKSNNCGLFGDQVMKISSELDITE 360

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L++     +D  ++       + +DL N IGNL++R  S++ K  D    T   
Sbjct: 361 DYWRFYLMKIRPETQDSSFNLKDFVTCIKSDLVNNIGNLINRYFSLV-KKLDINEFTVDI 419

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
             +  E I         E  + M N     AL   + +    ++Y    +PW+L  T+  
Sbjct: 420 PVDIIEYI--------TEYVDLMNNFKFREALKLCLKISDYGNKYIQTNRPWKLLSTDIK 471

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A  VL +   +   L  LL+ F+PK + 
Sbjct: 472 TAEHVLSIAGMICWILLSLLKPFIPKTSE 500


>gi|293189064|ref|ZP_06607793.1| methionine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292822011|gb|EFF80941.1| methionine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 576

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 137/521 (26%), Positives = 218/521 (41%), Gaps = 58/521 (11%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G DVL  +GTDEHG  I  AA  AGV+ +   DQN+R   +    L +SYD F RTT   
Sbjct: 3   GHDVLMVSGTDEHGTPILVAADGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTAGN 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYS-----------GWYSLRDEAYYNDDEVYKGADGQYY 150
           H+   + ++  + D G + +                   +         E  +G      
Sbjct: 63  HYRVVQDMFATVRDNGYMIEKVTRAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDNC 122

Query: 151 NAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
             Q +P +              ++E   YF  L A  D L ++ +   +         + 
Sbjct: 123 GNQMDPTELINPHSRINGETPNFVESTHYFLDLPALADALSAWLDEREKSGTWRPNVIKF 182

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNP--DGS 251
                  ++  +++R   DWGI +P   D P   +YVW DA+  YL+ +        D  
Sbjct: 183 SQNFLEDIRPRAMTRD-IDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPE 241

Query: 252 KAKFWPAD-----LHVIGKDILRFHAIYWPAFLL-------SANLP-------LPKKVFS 292
             + W  D      + +GKD + FH+  WPA LL           P       LP +V S
Sbjct: 242 AWRKWWNDPEALTYYFMGKDNIVFHSQIWPAELLGYNGQGAKGGAPGDLGVLNLPTEVVS 301

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             F+  +G+K S S G VI   + +     DALRYF+        D  +      +R N 
Sbjct: 302 SEFLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEFVRRTNG 361

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L  G GNLV+R+ SMI K +   IPTPG   + D ++L       + +   +++     
Sbjct: 362 ELVAGWGNLVNRTASMIAKKFG-EIPTPGELEDIDRALLDAVEAGFETVGNLIRHHRQKA 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL++ + LV E ++Y    +P++LK      R +TVL+   + +  L ++L  F+P  AN
Sbjct: 421 ALSEAMRLVGEANKYVTDTEPFKLKAPEQQQRLATVLWTLAQAVTDLNLMLSPFLPHAAN 480

Query: 472 KIFDILFVADE------NRCFQSLDQRLKPGFMLHKTFDPI 506
            I  ++  A E          + LD ++ P     +   PI
Sbjct: 481 DIDRVMGGAGEIAPMPYIEDVEELDPQVLPADFEGRDGYPI 521


>gi|154509672|ref|ZP_02045314.1| hypothetical protein ACTODO_02205 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799306|gb|EDN81726.1| hypothetical protein ACTODO_02205 [Actinomyces odontolyticus ATCC
           17982]
          Length = 576

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 136/521 (26%), Positives = 218/521 (41%), Gaps = 58/521 (11%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G DVL  +GTDEHG  I  AA  AGV+ +   DQN+R   +    L +SYD F RTT   
Sbjct: 3   GHDVLMVSGTDEHGTPILVAADGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTAGN 62

Query: 102 HHDTCRILWKKISDKGDIYKGCYS-----------GWYSLRDEAYYNDDEVYKGADGQYY 150
           H+   + ++  + D G + +                   +         E  +G      
Sbjct: 63  HYRVVQDMFATVRDNGYMIEKVTRAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDNC 122

Query: 151 NAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
             Q +P +              ++E   YF  L A  + L ++ +   +         + 
Sbjct: 123 GNQMDPTELINPHSRINGETPNFVESTHYFLDLPALAEALSAWLDEREKSGTWRPNVIKF 182

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNP--DGS 251
                  ++  +++R   DWGI +P   D P   +YVW DA+  YL+ +        D  
Sbjct: 183 SQNFLEDIRPRAMTRD-IDWGIPVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPE 241

Query: 252 KAKFWPAD-----LHVIGKDILRFHAIYWPAFLL-------SANLP-------LPKKVFS 292
             + W  D      + +GKD + FH+  WPA LL           P       LP +V S
Sbjct: 242 AWRKWWNDPEALTYYFMGKDNIVFHSQIWPAELLGYNGQGAKGGAPGDLGVLNLPTEVVS 301

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             F+  +G+K S S G VI   + +     DALRYF+        D  +      +R N 
Sbjct: 302 SEFLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEFVRRTNG 361

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +L  G GNLV+R+ SMI K +   IPTPG   + D ++L       + +   +++     
Sbjct: 362 ELVAGWGNLVNRTASMIAKKFG-EIPTPGELEDIDRTLLDAVETGFETVGNLIRHHRQKA 420

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           AL++ + LV E ++Y    +P++LK      R +TVL+   + +  L ++L  F+P  AN
Sbjct: 421 ALSEAMRLVGEANKYVTDTEPFKLKAPEQQQRLATVLWTLAQAVTDLNLMLSPFLPHAAN 480

Query: 472 KIFDILFVADE------NRCFQSLDQRLKPGFMLHKTFDPI 506
            I  ++  A E          + LD ++ P     +   PI
Sbjct: 481 DIDRVMGGAGEIAPMPYIEDVEELDPQVLPADFEGRDGYPI 521


>gi|227501490|ref|ZP_03931539.1| methionyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077515|gb|EEI15478.1| methionyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 572

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 131/493 (26%), Positives = 210/493 (42%), Gaps = 52/493 (10%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
           + G +VL  +GTDEHG  +   A   GV+ +   D+ +R   +    L +SYD F RTT 
Sbjct: 1   MRGRNVLMVSGTDEHGTPLLVQADKEGVSVRELADRYNRQIVNDLANLGLSYDLFTRTTT 60

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSG-----------WYSLRDEAYYNDDEVYKGADGQ 148
           + H+   + L+K +++ G + K    G              +       D +  +G    
Sbjct: 61  RNHYSVVQELFKGLNENGYMLKETTKGAISPSTGRTLPDRYIEGTCPICDADGARGDQCD 120

Query: 149 YYNAQHNPVQWMEE------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
               Q +PV  ++       E   F  + +    L   +   +  L   R +   + +K 
Sbjct: 121 NCGNQLDPVDLIDPVSKINGETPQFVETEHFLLDLPSLKDELQKWL-STREDWRPNVLKF 179

Query: 203 GLKDLSLSRKT-----FDWGIKIPDDPQ-----YIMYVWIDALTNYLTTTGYLDNP--DG 250
            L  L   R        DWGI IP D         +YVW DA+  YL+ +    +     
Sbjct: 180 SLNLLEDMRPRTMTRDIDWGIPIPVDGWQDNNAKKLYVWFDAVVGYLSASIEWAHRTGQP 239

Query: 251 SKAKFWPAD-----LHVIGKDILRFHAIYWPAF--------------LLSANLPLPKKVF 291
              K +  D      +  GKD + FH+  WPA                    L LP ++ 
Sbjct: 240 EAWKEFWQDPETRHYYFQGKDNITFHSQIWPAELLGYAGKGSKGGELHQYGELDLPTEIV 299

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           S  ++   G K S S G VI   + + E G D LRYF+        D  +  D   +RVN
Sbjct: 300 SSEYLTMSGSKFSSSKGVVIYVKDFLAEFGPDPLRYFIAVAGPENNDADFTWDEFVRRVN 359

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            +LANG GNLV+R+VSM  K++   +P P A  E DE+IL +           ++     
Sbjct: 360 NELANGWGNLVNRTVSMAHKNFG-EVPVPAALEERDEAILQLAEETFTTAGNLLEQSKFK 418

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +A+  ++ +V E + Y  +Q+PW+L K     +R +TVL+  ++V+    ++L  F+P  
Sbjct: 419 QAIVSIMHVVGEANAYIASQEPWKLAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFT 478

Query: 470 ANKIFDILFVADE 482
           A K+ + L    E
Sbjct: 479 AQKVHETLGRTGE 491


>gi|312069747|ref|XP_003137826.1| methionyl-tRNA synthetase [Loa loa]
 gi|307767008|gb|EFO26242.1| methionyl-tRNA synthetase [Loa loa]
          Length = 500

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 152/537 (28%), Positives = 230/537 (42%), Gaps = 89/537 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD-GL----DVLFTTGTDEHGQKIAK 60
           K +I+T I Y N  PHIGH Y  ++AD   R+  L  G     D LFTTGTDEHG KI +
Sbjct: 16  KHFITTPIFYANGPPHIGHLYTALLADASNRWRLLRDGNADLDDSLFTTGTDEHGLKIQQ 75

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A  AG   + + D  S  F+D+     I  +DFIRTTE RH +      +++  +G I 
Sbjct: 76  TATAAGCDPQSYCDNMSDKFKDLFCAFGIQPNDFIRTTETRHKE------EELDKRGQIQ 129

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN------------------PVQWMEE 162
           +G + GWYS  DE +Y  DEV K ++       +                    V+W++E
Sbjct: 130 QGKHEGWYSTTDECFYASDEVEKLSEQNSMIKMNRYVHYIVEDKNLVSKITGSVVEWVQE 189

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E Y F LS Y  K+ S+  S       +                +S  RK   WGI +P+
Sbjct: 190 ENYVFPLSKYLGKVRSWLSSCDIIRPKVYFPEAFQQASIERNLSMSRDRKRVTWGIAVPN 249

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           D    +YVW DAL +YLT                               ++ WPAFL++ 
Sbjct: 250 DESQTIYVWFDALISYLTV------------------------------SVIWPAFLIAL 279

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           +LPLPK++F H   L  G K+SKS+GNV+DP    + +  + LRYFL+R+     D  + 
Sbjct: 280 DLPLPKRIFVHSHWLVNGAKMSKSVGNVVDPFIASKSLSEEGLRYFLLRQGTPQNDANFT 339

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPT--PGAFTESDESILSVCSRV 397
                  +N DL N +GNL+ RS    L     Y    P     +  E  E ++   + +
Sbjct: 340 MLKAINVINTDLINNVGNLLQRSTIEKLNPSQRYPAFYPDSFHNSLLELGEPLVHSVNSL 399

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +   E     +I++AL  ++ ++ + + +F   +PW       DR              
Sbjct: 400 AELYEEQFDELMIYKALELLMEVMRQANGFFQFYEPWN---ELDDRK------------- 443

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLD---QRLKPGFMLHKTFDPIFPRFL 511
                   VP  A+ + + L +    R   ++         G  L +   P+  R +
Sbjct: 444 ------PAVPHYADHLLNRLGIKKNERGLGNVKLITDSKYFGRPLGEYSGPLMERIV 494


>gi|227871837|ref|ZP_03990239.1| methionine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842338|gb|EEJ52566.1| methionine--tRNA ligase [Oribacterium sinus F0268]
          Length = 468

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +  D + ++YVW+DAL+NY+T  GY  +        K+WPADLH+IGKDI+RFH IYWP 
Sbjct: 1   MDFDEKNVVYVWLDALSNYITGIGYDVDGEHQERFKKYWPADLHLIGKDIVRFHTIYWPI 60

Query: 278 FLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           FL+S N+PLPK+VF H ++L       +G K+SKS GNVI   +++   GVDA+R+F++ 
Sbjct: 61  FLMSLNVPLPKQVFGHPWLLTATAKSDEGTKMSKSRGNVIYADDLVRLFGVDAVRFFVMH 120

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           E+    DG    + + +R N+ LAN +GNLV R++SM  K +DG++   G     D+ + 
Sbjct: 121 EMPFENDGVISWELMVERFNSQLANILGNLVKRTISMSNKYFDGIVEDKGVTEPVDQDLK 180

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLY 449
           +      +     M    +  AL  +  +    ++Y D  +PW L K     DR  TVLY
Sbjct: 181 NTVLEQAKLAASKMDELKVADALTAIFEIFRRSNKYIDETEPWVLAKEESKADRLRTVLY 240

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
              E I   A LL++F+P    +I + L   + +    S       G  +      +F R
Sbjct: 241 NLTESIVIGASLLKSFMPSTGAEILEQLSTTERDFASLSAFGLYPSGNKVVADPKTLFER 300


>gi|240274148|gb|EER37666.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 616

 Score =  249 bits (636), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 110/537 (20%), Positives = 221/537 (41%), Gaps = 45/537 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +  + I++A+ Y N  PH+G+    ++ ADV   + +  G   L+  GTDE+G     
Sbjct: 11  KGQRNVLITSALPYVNNVPHLGNIVGSVLSADV---YQKACGRPTLYICGTDEYGTATET 67

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A   GVT +    + ++  +++ +  +I +D F RT   +H +  + ++K++ D G + 
Sbjct: 68  KALEEGVTPEELCAKYNKIHQEVYEWFEIGFDIFGRTPTAQHTEISQAIFKRLYDNGFLE 127

Query: 121 KGCYSGWYSLRDEAYYNDDEV--------YKGADGQYYNAQHNPVQWMEEEGYFF----- 167
           +      +  + +++  D  V        Y  A G   +   + +   + +         
Sbjct: 128 EKTAEQPFCEKHDSFLADRYVEGECPRCGYDDARGDQCDKCGHLLDPFDLKNPRCKLDGA 187

Query: 168 ----RLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKTF 214
               R + +   LL   +   E            P   R    S++K GLKD  ++R   
Sbjct: 188 TPVRRNTKHIHLLLDKLQPEIEAWVHPAIEKGDWPKNSRVITESWLKEGLKDRGITRD-L 246

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG+ +P D   + ++YVW +A   Y + T           +  P ++     +GKD + 
Sbjct: 247 KWGVPVPLDGYEKKVLYVWFEACIGYPSITANYTPDWELWWRD-PDNVQLYQFLGKDNVP 305

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +P   +       K   + +  ++ ++  K SKS G  +      E  V  D  R
Sbjct: 306 FHSVIFPGTQIGTRDKWTKLHHLSTTEYLNYENGKFSKSRGIGVFGNNAKETGVPADVWR 365

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           Y+L++      D  ++        N +L   +GNLV+R V +I          P     E
Sbjct: 366 YYLLKNRPETGDTQFEWRSFVDANNGELLAKLGNLVNRMVKLIASPKAYSSTVPDFTVPE 425

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDRA 444
             + +L   + +L++    M+   +   +A  + +V   +    + K    L  + P+RA
Sbjct: 426 PFKPVLGEVTTLLRQYITEMEGVHLRAGVATAMRIVEVGNGLIQSNKLDNSLIASEPERA 485

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           ++V+ + ++ +    +   +  P+ A+  F  +   DE +        +KPG  + K
Sbjct: 486 ASVVGIHLQPVPAGHV---SVDPRTAHVPFANIPSLDELKDEGWKPALIKPGHQIGK 539


>gi|116203381|ref|XP_001227502.1| hypothetical protein CHGG_09575 [Chaetomium globosum CBS 148.51]
 gi|88178093|gb|EAQ85561.1| hypothetical protein CHGG_09575 [Chaetomium globosum CBS 148.51]
          Length = 570

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 116/544 (21%), Positives = 214/544 (39%), Gaps = 63/544 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFT--------------- 48
             + +++A+ Y N  PH+G+    ++ ADV AR+ R  G++ L+                
Sbjct: 15  RNVLVTSALPYVNNVPHLGNIIGSVLSADVFARYCRGRGINTLYVGGEQRPSFRQVRADL 74

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +GTDE+G      AQ    + +   D+       +    +IS+D F RTT ++H D    
Sbjct: 75  SGTDEYGTSTETRAQKEKCSPRELCDKFHAVHAQVYKWFNISFDVFGRTTTQQHTDITHH 134

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQW- 159
           ++ K+   G + +      Y     ++  D           +  A G   +     ++  
Sbjct: 135 IFHKLEKHGFLEERPTPQPYCNTHGSFLADRLIEGQCPLCKFPDARGDQCDGCSQLLEPI 194

Query: 160 ----------------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                            E    FF+L   Q ++ S    + E   P   R+   +++K G
Sbjct: 195 NLVGPRCKLDGTMPVTHETRHVFFKLDKLQPQVESMLH-NVEKRWPTNARSATATWLKQG 253

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH-V 262
           LK  +++R    WG+ +P     + Y W DA   Y++ T    +      +     L+  
Sbjct: 254 LKPFTITRD-IRWGVPVPGY-DKVFYSWFDACIGYVSITACYTDQWERWWRNPDVQLYQF 311

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-E 319
           IGKD + FH++ +PA  +       K   + +  F+ ++G K SKS G  +    V + +
Sbjct: 312 IGKDNVVFHSVVFPATQIGTGDVWTKVHHLSTTDFLTYEGGKFSKSRGVGVFGDSVQQTD 371

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           V  D  R++L+       D  +  +GL +  N  L NG+G  VSR + +++ +Y  ++P 
Sbjct: 372 VPPDVWRFYLLSCRPETGDTEFRWEGLIEVNNNLLFNGVGGFVSRVLRLVVDEYSSVVPR 431

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                  D   + V + +L    + M    +   L   + +    D          L   
Sbjct: 432 WSE----DYGFVKVTNDLLNRYIKEMDGVELRAGLLTALEISRCGD---------TLLSG 478

Query: 440 N--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           +      ++V+ +TV ++  LA LL  ++P  A  I   L  A            +K G 
Sbjct: 479 DLHTQERASVVGLTVNLVHLLASLLAPYMPDTAAAINTQLQAAPLPLPKCWCADSIKMGH 538

Query: 498 MLHK 501
            +  
Sbjct: 539 RVAA 542


>gi|71034183|ref|XP_766733.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353690|gb|EAN34450.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 563

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 142/480 (29%), Positives = 234/480 (48%), Gaps = 18/480 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +    K  I+T + Y N  PH+GHAY ++ +DVL RF  L G D     GTDEHG KI  
Sbjct: 67  VSSGNKYLITTPLFYLNGPPHLGHAYTLVSSDVLKRFLILSGHDCKLLAGTDEHGSKIKT 126

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A N G + K +V      F  +    DI+ +  + T+E  H    + ++    + G IY
Sbjct: 127 TAANFGYSPKEYVISMRNQFFKLYKAYDITPEIVVHTSENEHKSKVKRVFDNFLESGHIY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +G + G++S +++ YY + ++  G     ++     V  ++E  YFF+L  ++   L  +
Sbjct: 187 RGLHRGYFSPKEDLYYTESKLINGKSPLGFD-----VTLVDEPAYFFKLDIWKR-KLVEF 240

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
               E ILP    NEV   ++S + D++++R   DWGI I +     +YVW DAL  YLT
Sbjct: 241 FKDSEVILPQHSLNEVRKLLQSEINDIAITRSNCDWGIPITNSGNETVYVWFDALLGYLT 300

Query: 241 TTGYLDNPDGSKAK-FWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
                   + S +       +HVIGKDIL FH I WPA L++  L +  +   HG++L+K
Sbjct: 301 HLHSFPPLEQSNSNLNGLKIIHVIGKDILTFHTILWPAILMALKLDIKLRFLVHGWLLNK 360

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEKISKSL N I P  +   V  D  R+ L+       D  +D       +   L N   
Sbjct: 361 GEKISKSLNNSISP--LNTSVPSDVSRFALMNLGDFSYDFEFDPSMFDNAL-KTLRNKFA 417

Query: 360 NLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           N   R  S++  +  D + P      + D  +L   ++  +EIR ++Q+  + R +  ++
Sbjct: 418 NTFYRVTSILQMNKVDTVQPC-----DCDHKLLEKFNKYSEEIRNSVQSFRLDRYIQILV 472

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + SEV+++ +  + W +  ++        ++   ++  ++I L    PKLAN +   L 
Sbjct: 473 EMSSEVNKFIELTQFWTM--SSQSELLNTSWICCTLLLYISIYLAPITPKLANDMILRLG 530


>gi|302507468|ref|XP_003015695.1| hypothetical protein ARB_06006 [Arthroderma benhamiae CBS 112371]
 gi|291179263|gb|EFE35050.1| hypothetical protein ARB_06006 [Arthroderma benhamiae CBS 112371]
          Length = 710

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 110/547 (20%), Positives = 209/547 (38%), Gaps = 44/547 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +  + I++A+ + N  PH+G+    II         +   D   + GTDE+G     
Sbjct: 111 VPGQRNILITSALPFVNNVPHLGN----IIGGRGINTLYVGAPDYQLSLGTDEYGTTTEA 166

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      ++ +  +IS+D F RTT +   +  + ++ K+   G + 
Sbjct: 167 KALAENCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITQDIFLKLEKNGFLE 226

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
           +   +  Y     ++           D  Y  A G   +            NP   ++  
Sbjct: 227 ERMTTQLYCEEHHSFLADRFVEGECPDCGYANARGDQCDLCGQLLESLQLRNPRCKIDGS 286

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTF 214
               R + +    L   ++  E        N            S++K GLK  S++R   
Sbjct: 287 TPVTRDTKHIFLELDKLQTKVENFFQDSTANGSWSNNGAVITTSWLKEGLKPRSITRD-I 345

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + +P     ++Y W DA   Y++ T    +      +  P D+     IGKD + 
Sbjct: 346 SWGTRVPLPGYEDKVIYSWFDACIGYVSITARYTDQWERWWRS-PKDVQLYQFIGKDNVV 404

Query: 270 FHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +PA  +       K   + +  ++ ++G K SKS G  +      +  +  D  R
Sbjct: 405 FHSVIFPASQIGTEDTWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPTDIWR 464

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTE 385
            FL+       D  +  D L    N  L   +GN VSR +  +  + Y+ ++P    + E
Sbjct: 465 CFLLSHRPETGDSEFTWDALVNCNNNLLLKNLGNFVSRVLKFVNSRHYNNIVPNWTQYYE 524

Query: 386 -SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
            S  +     +R+L +    +    I  A + V+ +  + + +    +    L K  P +
Sbjct: 525 GSFATFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAKNEPSK 584

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
            + V+ +    +  LA L+  ++P  AN I   L         +     +KPG  +    
Sbjct: 585 CAAVIGIATNTVHLLASLVAPYMPDTANSINTQLRANLLLIPDRWNADSIKPGHEIG-RA 643

Query: 504 DPIFPRF 510
           + +F R 
Sbjct: 644 EHLFTRI 650


>gi|41615241|ref|NP_963739.1| hypothetical protein NEQ457 [Nanoarchaeum equitans Kin4-M]
 gi|68565990|sp|Q74MZ1|SYM_NANEQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|40068965|gb|AAR39300.1| NEQ457 [Nanoarchaeum equitans Kin4-M]
          Length = 776

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 107/574 (18%), Positives = 215/574 (37%), Gaps = 84/574 (14%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++ ++ A+ Y N   H+GH A   + AD+  RF +L G + L+  G+D++G  I   A  
Sbjct: 2   RILVTAALPYSNGPIHLGHIAGAYLPADIFYRFVKLKGYNALYICGSDQYGSPIELNAIK 61

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT-CRILWKKISDKGDIYKGC 123
             +  K +     +   ++    +I +D +  T E   H    +  +  +   G + +  
Sbjct: 62  LNIDPKDYASFYRKIQEEIFKKFNIKFDIYSGTAESNIHPIIVKEFFLSLFSAGLLIEKE 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGAD--------GQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
               Y  + + +  D  V             G         ++  E       ++  +  
Sbjct: 122 QELPYDPKIKRFLPDRFVVGQCPYCGYEKAYGDQCEKCGRLLEPKELINPKSAITGEKVI 181

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--------------KTFDWGIKIP 221
                          ++  + I   K    D + S               +   WG+K+P
Sbjct: 182 FKKTRHLFFNIPKLKDKLKQYIESKKDVWNDFTYSWSLALLDNFKERAITRDNKWGVKVP 241

Query: 222 DDPQ--------------------------------------YIMYVWIDALTNYLTTTG 243
                                                      ++YVW DA   Y++ T 
Sbjct: 242 AKEMLEILKKALKEGKTPKDFGLLIDSTNEKDLENHIKEYENKVLYVWFDAPIGYISFTF 301

Query: 244 Y--LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA-------------FLLSANLPLPK 288
               +       K  P  +H IGKD + FH I+WPA              +L  ++ LP 
Sbjct: 302 ETSPEYRYYWDEKEKPYIVHFIGKDNIPFHTIFWPALIIGRNLGYKNINHILDFDIALPY 361

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD-ALRYFLVREIACGKDGFYDKDGLK 347
           +VF + ++ + G+K SKS    +    + +        R++L       KD  ++ D  K
Sbjct: 362 QVFGNPYLNYYGKKFSKSKRWGVFLDNIDKIDIDIDYFRFYLAYIHTVSKDMSFEWDQFK 421

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           + +N +L + IGN + R ++ I   ++G+ P      + D+ +L    ++ +++   +  
Sbjct: 422 EVINKELVDNIGNFIHRVLTFIYNRFNGIPPKIEHLDDKDKELLDKIKQLPEKVFNFIWK 481

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I  AL ++++  +  ++YF  ++PW+    N       + +  E ++   ILL  F+P
Sbjct: 482 GEIGNALREIVNTSNLANKYFQEKEPWKTNDPN------TIAIAFEAVKTFIILLYPFIP 535

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           + A  +  I  +  +    Q +++  KP  + HK
Sbjct: 536 EKAKLLASIANIDIKWDFNQKVEKINKPFIVFHK 569


>gi|145629338|ref|ZP_01785137.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
 gi|144978841|gb|EDJ88564.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
          Length = 548

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 22/406 (5%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             KG   K      Y    E   +        + +   +   PV   E E +FF L A++
Sbjct: 7   FVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPVVK-ESEHFFFDLPAFE 65

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L  +  S     L  E  N++  + +SGL+   +SR    +G +IP       YVW+D
Sbjct: 66  GMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLD 122

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLP 287
           A   Y+ +   L + +G     + A+       H IGKDI+ FH+++WPA L  +    P
Sbjct: 123 APIGYMASFKNLCDREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKP 182

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGL 346
             VF+HG++   G K+SKS G  I     +  +  + LRY+   ++    +D  ++ D  
Sbjct: 183 TNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLDDF 242

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +RVN D+ N + NL SR+   I K ++G +         DE++ +  +   ++I    +
Sbjct: 243 VQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LEDEALFAEFTAQAEQIAAYYE 298

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQA 464
           ++  ++A+ ++++L  + ++Y D + PW + K          V  + +E+ R L   L+ 
Sbjct: 299 SREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKP 358

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +PKLA +    L        + ++ Q L  G  L   F  +F R 
Sbjct: 359 VLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTL-APFKALFSRL 399


>gi|258566610|ref|XP_002584049.1| methionine-tRNA ligase [Uncinocarpus reesii 1704]
 gi|237905495|gb|EEP79896.1| methionine-tRNA ligase [Uncinocarpus reesii 1704]
          Length = 445

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 148/405 (36%), Positives = 212/405 (52%), Gaps = 24/405 (5%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY------KGADGQYYN 151
           +E    DT    +     +G IY   + GWYS+ DE +Y    V+       G       
Sbjct: 5   SEPPTRDTVMQ-FSTSGHRGHIYTAKHEGWYSVSDETFYPSSAVHATLDPATGRKIMSAI 63

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                V+W  E  Y FRLSA++D+LL +Y  +P+FI P    ++V+  V SGL DLS+SR
Sbjct: 64  ETGKEVEWSSETNYHFRLSAFKDQLLDFYNENPKFIRPQRYMDDVVETVSSGLSDLSISR 123

Query: 212 K--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                 WGI++P D    +YVW+DAL NYLT  GY   P       WPADLHV+GKDILR
Sbjct: 124 PVQRLTWGIRVPGDETQTIYVWLDALVNYLTYAGYPFTPGKENKSIWPADLHVVGKDILR 183

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH +YWPAFL++ +LPLP+++ SH       EK+SKS GNV++PI  I   GVD LR++L
Sbjct: 184 FHGVYWPAFLMALDLPLPRQILSHAHWTIGREKMSKSTGNVVNPIYAITRFGVDPLRFYL 243

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS--------MILKDYDGMIPTPG 381
            R+     D  Y+   + +R    L   +GNL SR V          I + + G +  P 
Sbjct: 244 ARDGGLSDDADYENAFVTERYKKTLQWALGNLASRLVRSKKWSVRQSIERSFGGELSKP- 302

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK---- 437
             +E+D     +   V    +  M +    +A   V+ ++ E ++YF    PW L     
Sbjct: 303 --SEADRKHQELLEEVRDVTKTWMDDVNPRKAAESVVGIIYETNKYFQDSSPWSLATQSE 360

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +P+R   V+Y T E +R   ILLQ F+P+ A ++ D+L VA +
Sbjct: 361 MGSPNRLDRVVYNTAESLRIAGILLQPFMPEKAARLLDMLGVAGD 405


>gi|145642100|ref|ZP_01797670.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
 gi|145273179|gb|EDK13055.1| tellurite resistance protein TehB [Haemophilus influenzae 22.4-21]
          Length = 548

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 101/406 (24%), Positives = 181/406 (44%), Gaps = 22/406 (5%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             KG   K      Y    E   +        + +   +   P+   E E +FF L A++
Sbjct: 7   FVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPIVK-ESEHFFFDLPAFE 65

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L  +  S     L  E  N++  + +SGL+   +SR    +G +IP       YVW+D
Sbjct: 66  GMLKEWTRSGS---LQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLD 122

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPAD------LHVIGKDILRFHAIYWPAFLLSANLPLP 287
           A   Y+ +   L   +G     + A+       H IGKDI+ FH+++WPA L  +    P
Sbjct: 123 APIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKP 182

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGL 346
             VF+HG++   G K+SKS G  I     +  +  + LRY+   ++    +D  ++ +  
Sbjct: 183 TNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLEDF 242

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            +RVN D+ N + NL SR+   I K ++G +         DE++ +  +   ++I    +
Sbjct: 243 VQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK----LEDEALFAEFTAQAEQIAAYYE 298

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQA 464
           ++  ++A+ ++++L  + ++Y D + PW + K          V  + +E+ R L   L+ 
Sbjct: 299 SREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKP 358

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
            +PKLA +    L        + ++ Q L  G  L   F  +F R 
Sbjct: 359 VLPKLAERAEAFLQAE---LRWDNIHQPLL-GHTLT-PFKALFSRL 399


>gi|260825349|ref|XP_002607629.1| hypothetical protein BRAFLDRAFT_123956 [Branchiostoma floridae]
 gi|229292977|gb|EEN63639.1| hypothetical protein BRAFLDRAFT_123956 [Branchiostoma floridae]
          Length = 784

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 107/486 (22%), Positives = 195/486 (40%), Gaps = 53/486 (10%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F RL   + L+  GTDE+G      A   G+T +   D+ ++   ++    +I +D F R
Sbjct: 229 FCRLRNWNTLYICGTDEYGTATETKALEEGLTPQQICDKYNKIHSEIYQWFEIGFDFFGR 288

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           TT  +  +     +                   +       + +  +G          N 
Sbjct: 289 TTTPQQTEFLADRF-------------------VEGTCPLCNYDDARGDQCDKCGKLINA 329

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            +         +L       L+      ++    +      S+V+ GLK   ++R    W
Sbjct: 330 TE--------LKLEPALSAFLNTIYPTDDWSNNAKV--ITRSWVRDGLKPRCITRD-LKW 378

Query: 217 GIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFH 271
           G  +P +   + + YVW DA   YL+ T         K    P  +   + + KD + FH
Sbjct: 379 GTPVPLEGFTEKVFYVWFDAPIGYLSITA-NYTDQWEKWWKNPQQVTLYNFMAKDNVPFH 437

Query: 272 AIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYF 328
           ++ +P  LL A  N  L   + +  ++ ++  K SKS G  +      +  +  D  R++
Sbjct: 438 SVVFPCSLLGAEDNYTLVNHLQATEYLNYEDGKFSKSRGVGVFGNNAKDTGIPADIYRFY 497

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+      +D  +  +    + N++L N +GN V+R++  +   + G+IP     TE D 
Sbjct: 498 LLFVRPESQDSTFSWEDFMTKNNSELLNNLGNFVNRALMFVSNFFQGVIPAVD-VTEDDG 556

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRAS 445
            +L+  +R LQ   + ++              V   ++Y   QKPW L K NP    RA 
Sbjct: 557 QLLAQVNRELQAFIQCLEKVS--------WGGVGGGNQYIQGQKPWVLVKGNPGEKARAG 608

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKPGFMLHKTFD 504
           TV+ +   V   L++++Q ++P  +N I   L    E N    +   RL+ G  + K   
Sbjct: 609 TVIGLAANVACLLSVMVQPYMPATSNTIQQQLQAPAEVNILTDTFVCRLQAGHKIGKP-S 667

Query: 505 PIFPRF 510
           P+F + 
Sbjct: 668 PLFQKI 673


>gi|226330823|ref|ZP_03806341.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198]
 gi|225201618|gb|EEG83972.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198]
          Length = 541

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 107/407 (26%), Positives = 182/407 (44%), Gaps = 23/407 (5%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             KG   K      Y    E   +     +  + +   +   PV   E E YFF L A+ 
Sbjct: 7   FVKGTCPKCKAQDQYGDNCEVCGSTYSPTELINPRSVVSGSTPV-MRETEHYFFDLPAFS 65

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           + L  +  S     L  +  N++  +  SGL+   ++R    +G +IPD P    YVW+D
Sbjct: 66  NMLQEWIRSGA---LQEQVANKMQEWFDSGLQQWDITRDAPYFGFEIPDAPGKYFYVWLD 122

Query: 234 ALTNYLTTTGYLDNPDGS--KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPL 286
           A   Y+++   L    G     +FW  D      H IGKDI+ FH+++WPA L  +    
Sbjct: 123 APIGYMSSFLNLCEKRGDLSFDEFWNKDSKADLYHFIGKDIVYFHSLFWPAMLEGSEYRK 182

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDG 345
           P  +F HG++   G K+SKS G  I     ++    D LRY+   +++    D   + + 
Sbjct: 183 PTNLFVHGYVTVNGAKMSKSRGTFITARAYLDHFDADCLRYYYAAKLSSRIDDIDLNLED 242

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
             +RVN+D+ N + NL SR+   I K +DG +    A +  D  +      + + I ++ 
Sbjct: 243 FVQRVNSDIVNKVVNLASRTAGFISKRFDGKL----ADSLDDAKLYQHFVDMKETIAQSF 298

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIRQLAILLQ 463
           +N+   +A+ ++++L  E +RY D + PW + K     A    +  + + + R L   L+
Sbjct: 299 ENREFGKAVREIMALADEANRYIDEKAPWVVAKQEGQDAQLQAICTMGINLFRVLMTYLK 358

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             +P L  +    L        + +L+Q L  G  + K F  +F R 
Sbjct: 359 PVLPSLTERSEAFLQT---QLTWDALEQPLL-GQEITK-FKALFNRI 400


>gi|153873508|ref|ZP_02002069.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152070026|gb|EDN67931.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 398

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 102/400 (25%), Positives = 164/400 (41%), Gaps = 36/400 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R+ + +++A+ Y N   HIGH  E I  D+  RF +L G    +    D HG  I  
Sbjct: 1   MTTRQ-ILVTSALPYANGPIHIGHLVEYIQTDIWVRFQKLRGHTCYYVCADDAHGTPIML 59

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            AQ  G+T +  + + S   +       I +D++  T    +    +++++ +   G I 
Sbjct: 60  KAQKEGITPEELITRYSTEHQADFADFAIGFDNYYSTHSSENEHFSQLIYQGLKTAGHIE 119

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQW---------- 159
           +     +Y    E +  D  +             G   +  +  +NP +           
Sbjct: 120 RRTIRQFYDPIKEMFLPDRFIRGECPNCGAKDQYGDSCEVCSKTYNPTELKNPVSAVSGA 179

Query: 160 ----MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                E E  F  LS ++  L  +  S+        + NE      SGL+   +SR    
Sbjct: 180 TPVEKESEHLFVNLSDFETMLQEWIGSNALQPAVRHKLNEWF---DSGLQAWDISRDAPY 236

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD-----LHVIGKDILR 269
           +G +IPD+P    YVW+DA   Y+ +     D        FW  D      H IGKDI  
Sbjct: 237 FGFEIPDEPGKYFYVWLDAPIGYMASFKQLCDQKQIDFNAFWQKDSQAEVYHFIGKDIQY 296

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH ++WPA L +     P  VF HGF+   G+K+SK+ G  I     +  +  + LRY+ 
Sbjct: 297 FHCLFWPAMLTAGGFRKPTAVFVHGFLKVDGQKMSKTRGTFISARTYLNHLQPEYLRYYF 356

Query: 330 VREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
             ++     D   + +   +RVNADL     N+ SR    
Sbjct: 357 AAKLGDGVDDIDLNLEDFVQRVNADLVGKFVNIASRCARF 396


>gi|255575064|ref|XP_002528437.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223532113|gb|EEF33920.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 523

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 130/296 (43%), Positives = 173/296 (58%), Gaps = 6/296 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   ++T + Y NA PH+G AY  I AD +ARF RL G  V+F TGTDEHG+KIA AA  
Sbjct: 79  ETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFVTGTDEHGEKIAAAAAA 138

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G +     D  S+++R +   L+ISYD FIRTT+ +H    +  + ++   GDIY+  Y
Sbjct: 139 CGSSPSEHCDVISQDYRTLWKDLEISYDKFIRTTDPKHEAIVKEFYSRVLANGDIYRADY 198

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            G Y +  E Y +  E+    D         P    +E+ YFF LS YQ  L      +P
Sbjct: 199 EGLYCVNCEEYKDAKEL---LDNNCCPMHLKPCIERKEDNYFFALSKYQKLLEETLTENP 255

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+ P  R NEV S++KSGLKD S+SR + DWGI +P+D +  +YVW DAL  Y++    
Sbjct: 256 NFVQPSFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIYVWFDALLGYISALSE 315

Query: 245 LDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
                  +   +  WPA LH+IGKDILRFHA+YWPA L+SA L LPK VF HGF+ 
Sbjct: 316 DKEQPNLQNAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLGLPKMVFGHGFLT 371



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEV 454
           + + + + +N  +  A   V+ + +  + Y D + PW L K      + A+  L + +E 
Sbjct: 373 VDKAQIHYENLALSVACEAVLEIGNAGNAYMDERAPWSLFKQGGAASEAAAKDLVIILEA 432

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENR---CFQSLDQRLKPGFMLHKTFDPIFPRF 510
           +R +AI L    P L  +I+  L  + ++     +         G  +     P+F R 
Sbjct: 433 MRIIAIALSPVSPSLCWRIYAQLGYSKDHFNTLTWSETKWGGLKGGQVMAQPKPVFARI 491


>gi|263514338|sp|C4V943|SYMC_NOSCE RecName: Full=Probable methionyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Methionine--tRNA ligase; Short=MetRS
          Length = 560

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 117/558 (20%), Positives = 215/558 (38%), Gaps = 59/558 (10%)

Query: 1   MKER--EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQK 57
           MK++   K  I++A+ Y N QPH+G+    ++ AD+ ARF R +  DV+F +GTDE+G  
Sbjct: 1   MKKKFLVKKIITSALPYVNNQPHLGNIIGCVLSADMYARFCRKNNEDVVFLSGTDEYGTA 60

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I  AA     T     ++N    + + D  +I +D F  TT   H    +  + KI + G
Sbjct: 61  IEMAAFAQNKTPLQICEENRIIHKKIYDWFNIDFDFFGHTTSTAHTKNVQDFFNKIHNNG 120

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------------YYNA 152
              +     ++  + + +  D  V                                    
Sbjct: 121 FFTEQEIEQFFCDKCQIFLADRYVVGTCKFCKYTDAKGDQCDGCGHTYKSLDLIDAKCTL 180

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
            H+          FF  + ++D  L    +          +    S++   L    ++R 
Sbjct: 181 CHSFPNIKSTRHLFFDFNNFKD-KLQKLFNTNSQYWSENGKQITKSWLDQELLPRCMTRD 239

Query: 213 -TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL-----DNPDGSKAKFWPAD----- 259
               WG+ +P     + + YVW DA+  Y T          ++ +  K   +  D     
Sbjct: 240 LKNRWGVPVPLKDFEEKVFYVWFDAVIGYFTFYKEYVAARSESKELDKNNVFATDNILQD 299

Query: 260 ---LHVIGKDILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
              +  +GKD + FH I +P+ + + N   PL KK+    F+L + EK SKS G+ I  +
Sbjct: 300 CELVQFMGKDNVFFHTIVFPSLIFATNDSYPLIKKLSVTEFLLFENEKFSKSRGHGIFGL 359

Query: 315 E-VIEEVGVDA-LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           + V   +G     RY+L +      D  +        ++ADL N IGN  +R +  I K+
Sbjct: 360 DLVDNTMGQSCLWRYYLAKIRPEKCDSNFSFTHFTNVIDADLNNNIGNFCNRVLKYI-KN 418

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
            +  + +       D+ ++    ++ +E   +     I  AL +++ +    + Y     
Sbjct: 419 KNDKLISIDKLEHRDDLMVQTIDKIYKEYLTSFSAIRIREALEKILEISKVGNEYVQQV- 477

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                K    +      V   ++  +  LL+ F+P  + K+  +     EN C       
Sbjct: 478 --VSSKIEVPKG---FQVAFSIVVLIGQLLEPFIPVSSEKLLKMCNRKKENFCES---FY 529

Query: 493 LKPGFMLHKTFDPIFPRF 510
           +     +     P+F + 
Sbjct: 530 IIKSAEIGDDIKPLFNKL 547


>gi|320325842|gb|EFW81903.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327240|gb|EFW83254.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 547

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 110/493 (22%), Positives = 199/493 (40%), Gaps = 38/493 (7%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
           A  ++ AD+ ARF R  G DV+F  GTDEHG     AAQNA +  K + +      R + 
Sbjct: 2   AGSLLPADIYARFLRQQGHDVMFICGTDEHGTPAEIAAQNANMDVKSYCNHMYEVQRRIY 61

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-- 142
               +S++ F R++  ++ +  +  + K+ D G I++   S +YS  +  +  D  +   
Sbjct: 62  ANFGLSFNFFGRSSCDQNVEITQEFFFKLQDAGYIFEDVISQYYSAVEGRFLPDRFINGQ 121

Query: 143 ---------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY------------- 180
                     G       A  NP + +  +         + +  S+              
Sbjct: 122 CPRCGFLSATGDQCDGCGALLNPEELINPKSSISGDEKLELRRTSHLFLDLEKTVPLLQK 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNY 238
                    + R          GLK   ++R    WGI +P       + YVW DA   Y
Sbjct: 182 WHDSNRWGNLTRGIISKWMDNEGLKARCITRDN-KWGIPVPLLHLTPKVFYVWFDAPYAY 240

Query: 239 LTTTGYLDNPDGSKA----KFWPAD----LHVIGKDILRFHAIYWPAFLLSA--NLPLPK 288
           +  T    +  G       K+W +D       + KD + FHAI+WPA LL++  N+ L  
Sbjct: 241 IAITKAYGDTLGDAETILKKWWYSDSVEYTQFMAKDNVPFHAIFWPAQLLASRDNVKLVD 300

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +    ++ + G K S S    +   + +E    D  RY+L        D  +      +
Sbjct: 301 DIKGFNWLTYDGGKFSTSRLRGVFLDQALELFPADYWRYYLAARAPESSDSDFSFQDFAQ 360

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQN 407
            VN++L  G+GN V R   +   +Y+    +        DE+++   + +   ++  M  
Sbjct: 361 VVNSELVGGLGNFVRRVFKLASNNYEETNVSFNTREVMLDEALVVEITELFSNLQSLMYK 420

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           + + +++ ++  L S  +RY    +PW   K++P +A  V+      I   ++ +   +P
Sbjct: 421 KEVRKSIEKIRLLWSIANRYIAEAQPWTTIKSDPHQALQVIKNCFYFIYLFSLSVAPVIP 480

Query: 468 KLANKIFDILFVA 480
             A K+   L + 
Sbjct: 481 FTAEKLRRSLGLD 493


>gi|194376120|dbj|BAG62819.1| unnamed protein product [Homo sapiens]
          Length = 520

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 195/387 (50%), Gaps = 42/387 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--F 214
           + W +EE Y FRLS ++  L  +   +P+ I P    + V+ ++   L DLS+SR++   
Sbjct: 130 ISWTKEENYIFRLSQFRKPLQRWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHL 189

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
            WGI +P D    +YVW+DAL NYLT  GY +        +WPA  H+IGKDIL+FHAIY
Sbjct: 190 HWGIPVPGDDSQTIYVWLDALVNYLTVIGYPNA---EFKSWWPATSHIIGKDILKFHAIY 246

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           WPAFLL A +  P+++  H      G+K+SKSLGNV+DP   +    VD  RYFL+R+  
Sbjct: 247 WPAFLLGAGMSPPQRICVHSHWTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGV 306

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE- 385
              D  Y  + + K +N++LA+ +G L++R  +  +   +             PG     
Sbjct: 307 PNWDCDYYDEKVVKLLNSELADALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPS 366

Query: 386 -----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                 D +++S  + + +++ ++  N  I++AL  V S V + + +     PW+L   +
Sbjct: 367 VRAQAEDYALVSAVATLPKQVADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWES 426

Query: 441 PDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL-------- 489
           P  A    TVL+V +E +R    LLQ   P LA+K+   L V+   R    L        
Sbjct: 427 PVDAPWLGTVLHVALECLRVFGTLLQPVTPSLADKLLSRLGVSASERSLGELYFLPRFYG 486

Query: 490 ------DQRLKPGFMLHKTFDPIFPRF 510
                  +RL P   L      +FPR 
Sbjct: 487 HPCPFEGRRLGPETGL------LFPRL 507


>gi|116515014|ref|YP_802643.1| hypothetical protein BCc_072 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256868|gb|ABJ90550.1| methionyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 547

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 113/529 (21%), Positives = 216/529 (40%), Gaps = 51/529 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A  Y N   H+GH  E I AD+  R+HR+    V+F    D HG  I   ++N
Sbjct: 6   DKILVTCAFPYANGDIHLGHLLEQIQADIWVRYHRMKHRSVVFICSDDTHGTAIMLKSKN 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             ++++  +       +       I +D +  T  + + D C  ++K +  K  I +   
Sbjct: 66  MNISSEKLIHDIGIKHKSDFLKFSIIHDYYSSTHSQVNKDLCCNIFKILKKKKFIKEKII 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y  +   +  D  +             G +  Y  A +N ++ +             
Sbjct: 126 SQLYDKKLNMFLPDRFIKGICPKCKSNNQYGDNCDYCGAFYNAIELLNPISELSKTKPII 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 FF+LS ++  L ++  S           N++   +   L   ++SR    +G +
Sbjct: 186 KQSNHLFFKLSYFKKFLKTWINSGIT---QKSILNKLNDLLSKKLCSWNISRDKPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP       YVW+DA   Y++      N +   +   FW         H IGKDI+ FH 
Sbjct: 243 IPGYIDKFFYVWMDAPIGYISCIQEFCNINKTVNFNDFWSKHSKYQLFHFIGKDIIYFHC 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++WPA L       P  +F HG++     K+SKS G++I   + +     D+LRY+   +
Sbjct: 303 LFWPAILEGCEYRKPTNIFVHGYVTLNKLKLSKSKGSIITANQWLSYFDSDSLRYYFASK 362

Query: 333 IACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           ++   +D   +      R+N+D+ N + NL SRS   + K +     +  +     E + 
Sbjct: 363 LSNNIEDIEINLYDYAYRINSDIVNNVINLASRSYFFLKKYF----FSILSNNLLKEKLY 418

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLY 449
                 +++I    + +     + ++  L  + ++YF+ QKPW L K      +   +  
Sbjct: 419 KKFVSSIKDIENFFEKRKFSLIIQKIRFLSQKANKYFNDQKPWVLIKNIIYKSKVHDICS 478

Query: 450 VTVEVIRQLAILLQAFVPKLANK---------IFDILFVADENRCFQSL 489
           +++ + R L   L+  +P L  K         +++ + +   N    + 
Sbjct: 479 LSINLFRILMTFLKPIMPTLVKKSEFFLNKKLLWEKIKIPLTNHKLNNF 527


>gi|167043416|gb|ABZ08118.1| putative tRNA binding domain protein [uncultured marine
           microorganism HF4000_APKG1C9]
          Length = 729

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 130/591 (21%), Positives = 230/591 (38%), Gaps = 97/591 (16%)

Query: 12  AIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           A  Y N   H+GH A   + AD+  R+ R  G  VL  +G+DEHG  I   A+  G   +
Sbjct: 2   AWPYANGPLHLGHVAGNCLPADIQFRYERARGRRVLMCSGSDEHGTPITLTAEEEGAHPQ 61

Query: 71  VFVDQNSRNFRDMADVLDISYDD-------------FIRTTEKRHHDTCRILWKKISDKG 117
             VD   +  +     +  S+               + RT++ RH +  R L+  + +  
Sbjct: 62  EIVDHFHQINKKALIDMGCSWAMDVDPRGPEYGGALYNRTSDPRHKELVRDLFTLMLEAK 121

Query: 118 DIYKGCYSGWYSLRDE--------AYYNDDEVYKGADGQYYNAQHNP------------- 156
            + +     + S+  +         Y   D       G   +   +              
Sbjct: 122 MLERKTMQQYCSVSKDGSIRFLPDRYVEGDCPVCSFSGARGDQCDDCGATYETHELINPI 181

Query: 157 --------VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   ++    +  FFRL  +QD L S+Y    E   P  R +   +++  GL+  +
Sbjct: 182 SKLDADANIEVRNTDHLFFRLDLFQDSLNSHYLERKEVWKPNVR-SMTKNWLDMGLRPRA 240

Query: 209 LSRKTFDWGIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNPDGSK---------AKF 255
           ++R   DWGI++P          +YVW +A+  Y T           +          + 
Sbjct: 241 VTRD-IDWGIELPLSGSEWDSKRVYVWFEAVQGYYTCARIWAERFADEAGHPDGVDAWRN 299

Query: 256 W---------PADLHVIGKDILRFHAIYWPAFLLSANL----------PLPK------KV 290
           W         P  L+ +GKD + FH I WPA L+  N           PLP        V
Sbjct: 300 WWTVSGDGYVPKHLYFMGKDNIPFHTIIWPAILMGINSAQSGNPVSHTPLPNDLVLEANV 359

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            ++ +++ +G + SKS  + I     +E    D LRY+L   +  G D  +  D    RV
Sbjct: 360 PANQYLMLQGGQFSKSRKHAIWLPSFLERFDPDTLRYYLSINMPEGHDTDFRWDEFVDRV 419

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQ 408
           N +L     N V R +++  +  D        F   DE     S+ SR L++   +M+ Q
Sbjct: 420 NNELIGTYANFVHRVMTLSHRLSDDGSNPLSDFDSPDEHTEAQSIISRHLEDAIHSMERQ 479

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWE-LKKTN-PDRASTVLYV--TVEVIRQLAILLQA 464
               AL  ++++    +       PW+ L   + P+   ++  +  T  + R LA+ L+ 
Sbjct: 480 RFKEALRCIMNIAQLGNSILQEAAPWKHLDGDDTPEARKSLSSLAFTWRMCRGLAVTLRP 539

Query: 465 FVPKLANKIFDILFVADENRCFQ-----SLDQRLKPGFMLHKTFDPIFPRF 510
           F+P  +++++ +L    +          S D RL+  + + +   P+F + 
Sbjct: 540 FIPYQSDRLWAMLNEPSDIDSILWDDAFSYDSRLE--WNVDEPV-PLFEKL 587


>gi|313611383|gb|EFR86078.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 380

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 96/237 (40%), Positives = 145/237 (61%), Gaps = 6/237 (2%)

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++ +LPLPK VF HG+IL K  K+SKS GNV+DP  +I+  G+DALRY+L+RE+  G DG
Sbjct: 4   MALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDG 63

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVL 398
            +  +    RVN DLAN +GNL++R+V+MI K +DG IP   G  TE D++++   + V+
Sbjct: 64  LFTPEDFVDRVNYDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTEFDQTLVDFKNNVV 123

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA--STVLYVTVEVIR 456
           +E   +M++     AL Q+ SLVS  ++Y D   PW L K    RA  ++V+    E +R
Sbjct: 124 KEYEASMEHMQFSVALNQLWSLVSRTNKYIDETAPWALAKEEEKRAELASVMTHLAENLR 183

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN-RCFQSL--DQRLKPGFMLHKTFDPIFPRF 510
            +A+LLQ F+ +   +IF  L + +EN + + S+     +  G  + K   PIFPR 
Sbjct: 184 IIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEIPAGTTVVKKGTPIFPRL 240


>gi|302662778|ref|XP_003023040.1| hypothetical protein TRV_02862 [Trichophyton verrucosum HKI 0517]
 gi|291187016|gb|EFE42422.1| hypothetical protein TRV_02862 [Trichophyton verrucosum HKI 0517]
          Length = 474

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 183/342 (53%), Gaps = 15/342 (4%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-- 212
             V++ +E  Y F+LSA+QD+LL +Y  +P+FI P    + ++  V SGL+DLS+SR   
Sbjct: 92  KEVKFSQETNYHFKLSAFQDRLLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVD 151

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
              WGI +P D    +YVW+DAL NY+T  GY   P   +   WPAD+HV+GKDI RFH 
Sbjct: 152 RLSWGIPVPGDTTQTIYVWLDALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRFHC 211

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWPAFL++ +LPLP+ + +H        K+SKS GNV++P+  +   GVD +R++L   
Sbjct: 212 IYWPAFLMALDLPLPRTILTHAHWTMNHSKMSKSTGNVVNPMFAMARYGVDPMRFYLAMN 271

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-------AFTE 385
                D  YD   + +     L  G+GNL SR +     +    +           A   
Sbjct: 272 GGLASDTDYDNSYIVRDYKNILQGGLGNLCSRVMRGKGWNVRESVVKMTNGQGSRRAKDP 331

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---TNP- 441
           S+   +    +V   +   M      RAL +++ ++ + +RY  +  PW L K   T+P 
Sbjct: 332 SEIEHMEFLEKVPGLVSNQMNELNPRRALEEIVKIIDQTNRYVQSTGPWNLAKEAGTDPT 391

Query: 442 --DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             D+   V+Y   E +R   ILLQ F+P+ A K+ D+L V +
Sbjct: 392 AHDQLVGVIYNATESLRIAGILLQPFMPEKAKKLLDMLGVEE 433


>gi|307104320|gb|EFN52574.1| hypothetical protein CHLNCDRAFT_58789 [Chlorella variabilis]
          Length = 979

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 86/523 (16%), Positives = 184/523 (35%), Gaps = 64/523 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV ARF R  G +V++  GTDE G      
Sbjct: 208 GQRNILITSALPYVNNVPHLGNIIGCVLSADVYARFCRARGYNVVYVCGTDEFGTATETK 267

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   D+     +                           +++      D + 
Sbjct: 268 ALEEGLTCQQICDKYHAIHKARGGGS---------------------IYEWFDIGFDKFG 306

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +   +   ++      +++  + +    +    Q   E    F    +        +
Sbjct: 307 RTPTRAQTEIGQS------IFRTLEQRGCLVEQTMEQLFSEPLGKFLADRFVTGTCPKCK 360

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                    +    +++  +       L+  T    I              D  +     
Sbjct: 361 YEDARGDQCDACGSLLNPTELIDPKCKLTGSTPVAYI--------------DRASALGGW 406

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHK 299
           +                 +  +GKD + FH + +PA LL    P    + +    ++ ++
Sbjct: 407 SSNCVQDVEL--------VQFMGKDNVPFHTVIFPATLLGTRDPWTMMRSISVTEYLNYE 458

Query: 300 GEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             K SKS G  +   +  E  + V+  RY+L+       D  +  D    + NA+L + +
Sbjct: 459 DGKFSKSRGVGVFGNDAKETGIPVEVWRYYLLALRPETSDSAFQWDDFATKNNAELNDNL 518

Query: 359 GNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           GN ++R++      +D  +P     GA  E+   +    + ++++  + ++   +  AL 
Sbjct: 519 GNFINRTLKFCWARFDKTVPGASAGGAGMEAVRGLGEKVAALVEQYIQALEGLRMKEALK 578

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +      + +F   + W   K + +  ++ +     ++  LA LLQ F+P    K+  
Sbjct: 579 CAMLASKAGNAFFQETEIWVAYKQDKEACASYISACAGIVLLLAALLQPFMPSFTAKLLQ 638

Query: 476 ILFVADENRCFQSL-------DQRLKPGFMLHKT-FDPIFPRF 510
            L  ++       L          L+PG  +      P+F + 
Sbjct: 639 QLGASEAPLLTDDLVKAAANPAALLRPGHPIGAAEPTPLFRKI 681


>gi|84997678|ref|XP_953560.1| methionyl-tRNA synthetase [Theileria annulata]
 gi|65304557|emb|CAI72882.1| methionyl-tRNA synthetase, putative [Theileria annulata]
          Length = 573

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 136/499 (27%), Positives = 237/499 (47%), Gaps = 43/499 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++  I++ + Y N  PH+GHAY ++ +DVL RF  L G +     GTDEHG KI   
Sbjct: 64  KTDQRYLITSPLFYLNGPPHLGHAYTLVSSDVLKRFLILSGYECKLLVGTDEHGSKIKLT 123

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + N G + K +V+    ++ ++    DIS D  + T+E  H    + ++      G IY+
Sbjct: 124 SSNLGYSPKQYVNLMRNHYYELYKQYDISPDIVVHTSENDHKSKVKDVFNSFVRSGFIYR 183

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G + G++S +++ YY + ++  G     +      V  + E  YFF+LS++++KL+ ++ 
Sbjct: 184 GLHKGYFSPKEDLYYTESKLIDGKSPLGF-----EVSQVNEPAYFFKLSSWREKLIDFF- 237

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY--------------- 226
                I P     EV   ++S L D+++SR   DWGI I                     
Sbjct: 238 -KESVIKPNHSLIEVRKSLESDLNDIAISRSNCDWGIPINIMNNGETDQNETVCNETVCN 296

Query: 227 ------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
                  +YVW DAL  YLT           + K     +HVIGKDIL FH++ WP+ L+
Sbjct: 297 ETVSNETVYVWFDALLGYLTHFNSFPQLQDQELKNLKL-IHVIGKDILTFHSLLWPSILM 355

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + ++ +P K+  HG++L+KGEKISKSLGNV +    + +V     R+ L+       D  
Sbjct: 356 ALDIQVPIKLLVHGWLLNKGEKISKSLGNVSNLEPQLSDVS----RFALMSLGDFSSDFE 411

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQ 399
           +D       +   L N   N   R  S++     D ++P     T +D  +++       
Sbjct: 412 FDSSIFDNSI-KILRNKFANTFYRITSLLHNHKLDSVLP-----TNTDHELINKFHLYTV 465

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            I + M++  I + +  ++ + SEV+R+ +  + W +          + ++   ++  ++
Sbjct: 466 NITKYMESFRIDKYIQVLMEMSSEVNRFIELNQIWTM---GTCELLQISWLLCTLLFYIS 522

Query: 460 ILLQAFVPKLANKIFDILF 478
           + L    PKL+N +   L 
Sbjct: 523 VYLSPITPKLSNDMISRLN 541


>gi|326437155|gb|EGD82725.1| hypothetical protein PTSG_03376 [Salpingoeca sp. ATCC 50818]
          Length = 436

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 144/435 (33%), Positives = 222/435 (51%), Gaps = 28/435 (6%)

Query: 83  MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
           M  V ++    FIRTT   H       W+ I  KG I  G Y GWYS+ DEA+Y+  +V 
Sbjct: 1   MNGVCNVQPSRFIRTTSPEHKRAVDQFWRTIESKGHIRLGKYKGWYSVVDEAFYSAHQVE 60

Query: 143 KGADG---QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
                          + V+   E+ Y F L+A + K+  +  S P  + P   R++V+SF
Sbjct: 61  PDPGNPANMRAVETGSAVEEYTEDNYMFNLNAMKGKVREWLLSSPTTVYPSVYRHQVLSF 120

Query: 200 -VKSGLKDLSLSR--KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
              + L DLS+SR   +  WGI +P +  + +YVW+DAL NYLT  GY D   G+     
Sbjct: 121 LDDADLPDLSVSRLRSSLAWGIPVPTNENHTIYVWMDALVNYLTALGYPDQLTGTL---- 176

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
             D HVIGKDIL+FHA+YWPAFLL+A L  P+++  HG     G K+SKS+GNV+DP+  
Sbjct: 177 --DTHVIGKDILKFHAVYWPAFLLAAGLNPPRRILVHGHWTVAGAKMSKSVGNVVDPLVE 234

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            ++VG D LR++L++E   G D  +     +    ++LAN  GNL+SRS    +   +  
Sbjct: 235 ADDVGSDLLRFYLLKEARLGSDADFSHKR-RDAAISELANNFGNLLSRSTGKRVNPTNTY 293

Query: 377 IPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            P      T+ ++ +  V +   + ++E   +  +   + +++  + E ++YF   +PW+
Sbjct: 294 PPLADVKLTQREQHVADVINNTQRRVQELYASGDVGLGIEEILHCLREGNKYFQEMEPWK 353

Query: 436 LKKTNPDRAS-----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------- 483
           L K   D A+       LY T E++R +++LL    P ++    D L VA  N       
Sbjct: 354 LAKLKDDAAAQHRRLACLYTTYELLRVVSLLLCPVTPAISAACLDKLAVAPSNGSAFCQS 413

Query: 484 --RCFQSLDQRLKPG 496
               +      LKPG
Sbjct: 414 LAFSYNKGGHALKPG 428


>gi|225680905|gb|EEH19189.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 487

 Score =  236 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 134/392 (34%), Positives = 209/392 (53%), Gaps = 12/392 (3%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA------QHNPVQWM 160
           +  +   +    +    + GW+S+ + A+Y    V    D                VQW 
Sbjct: 51  KKPFYITTPIFYVNAAKHEGWFSVSERAFYPPSAVQPILDPSTGRKIIASIETGKEVQWT 110

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGI 218
            EE Y FRLSA+++ LL +Y +HP FI P    +++++ + +GL+DLS+SR     +WGI
Sbjct: 111 SEENYHFRLSAFKEPLLEHYRNHPNFITPKHYMDDMMNAISAGLQDLSISRPASRLNWGI 170

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            +P D   ++YVW+DAL NY+T  GY   P       WPAD+ V+GKDILRFH IYWPAF
Sbjct: 171 PVPYDESQVIYVWLDALVNYITYAGYPFPP--DAKSIWPADVQVVGKDILRFHCIYWPAF 228

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L++  LPLP+++ +H       EK+SKS GNV++P   IE  GVD +R+FLV + A   D
Sbjct: 229 LMALGLPLPRQIMAHAHWTINNEKMSKSTGNVVNPYFAIERFGVDTVRFFLVIDGAQVSD 288

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y+   + +R    L  G+GNL SR +          +   G               + 
Sbjct: 289 SGYENSYIVERYKKGLQRGLGNLASRVLRGKKWIVRSSVVMAGEGRFPRTEHQDFLESIP 348

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++ R+ M+     +AL  ++ ++ + ++YF   KPW L  +N    ++V+Y T E +R  
Sbjct: 349 EKARDEMRQLDPRKALNSIMEIIIQTNKYFHQMKPWILAMSNVVMLNSVIYSTAESLRIA 408

Query: 459 AILLQAFVPKLANKIFDILFV--ADENRCFQS 488
            ILLQ F+P+ ++++ D+L V  A E R F +
Sbjct: 409 GILLQPFMPQKSSELLDMLGVARAAEKRNFDA 440



 Score = 37.1 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 3  EREKLYISTAIAYPNAQPHIG 23
          +++  YI+T I Y NA  H G
Sbjct: 50 DKKPFYITTPIFYVNAAKHEG 70


>gi|74186218|dbj|BAE42903.1| unnamed protein product [Mus musculus]
          Length = 394

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 123/383 (32%), Positives = 193/383 (50%), Gaps = 30/383 (7%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT- 213
           +PV W +EE Y F+LS +++ L  +  ++P+ I P      V+ +++  L DLS+SR++ 
Sbjct: 2   HPVSWTKEENYIFKLSQFREPLQRWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSS 61

Query: 214 -FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
              WGI +P D    +YVW+DAL NYLT  GY D        +WPA  H+IGKDIL+FHA
Sbjct: 62  HLHWGIPVPGDDSQTIYVWLDALVNYLTVVGYPDA---DFKSWWPATSHIIGKDILKFHA 118

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWPA LL A L  P +++ H      G+K+SKSLGNV+DP   ++   VD  RYFL+R+
Sbjct: 119 IYWPALLLGAGLRPPHRIYVHSHWTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQ 178

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---------- 382
                D  Y  + + K ++++LA+ +G L++R  +  +           A          
Sbjct: 179 GVPNWDCDYYDEKVVKLLDSELADALGGLLNRCTAYRINPSGTYPSFCAACFPSEPGLTG 238

Query: 383 ----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                   D ++++  + + + +     +  I++AL  V S V + + +     PW+L  
Sbjct: 239 PSVRVQAEDYALVTAVATLPKLVAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNW 298

Query: 439 TNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK- 494
            +P+ A    TVL+V +E +R    LLQ   P LA+K+   L V+   R    L    + 
Sbjct: 299 ESPEDAPWLGTVLHVALECLRVFGTLLQPVTPNLADKLLSRLGVSTTERGLGELYFLPRF 358

Query: 495 -------PGFMLHKTFDPIFPRF 510
                   G  L      +FPR 
Sbjct: 359 YGHPCPFEGRKLGPDTGLLFPRL 381


>gi|171695362|ref|XP_001912605.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947923|emb|CAP60087.1| unnamed protein product [Podospora anserina S mat+]
          Length = 623

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 113/574 (19%), Positives = 223/574 (38%), Gaps = 69/574 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             + +++A+ Y N  PH+G+    ++ ADV ARF R  G +VLF  GTDE G   +  A+
Sbjct: 17  RNILVTSALPYVNNVPHLGNIIGSVLSADVFARFWRGRGGNVLFVGGTDEFGTTTSLRAR 76

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             GV  +   D+  +  +D+ +  +IS+D F RTT  RH +    ++K++  +G I    
Sbjct: 77  EEGVAPQELCDKYHKIHKDVYEWFNISFDIFGRTTNDRHTEITHDIFKELWGEGLIEIRD 136

Query: 124 YSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG------YF 166
               +    + +  D            E  +G      +   +  + +E +         
Sbjct: 137 SEQLWCEECKGFVFDRLVEGTCPECGSEEARGDQCGECDWVFDITELVEPKCKIHGGRPA 196

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDD-- 223
            R S +    L  +    E     +  + +++  + +G   + ++R   DWG  +P    
Sbjct: 197 LRPSKHLFLKLDNHGPLLENQAKEQGEDWLVNAKEINGNSSICITRDGLDWGTPVPGRLA 256

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD---------------------- 259
                + Y W DAL  Y++ T      +  +A + P+                       
Sbjct: 257 GFDGKVFYPWWDALLGYISITASGMEGESWRAWWRPSTPIAMKSHDDNDSSFYKPGDNTP 316

Query: 260 --------LHVIGKDILRFHAIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGN 309
                      +G D + FH I +PA LL  + P   P+ + S  F+ ++G + SKSLG 
Sbjct: 317 KSDVGVRLSQFLGADNIFFHGILFPATLLPLDPPYTAPRHIASTRFLTYQGGRFSKSLGV 376

Query: 310 VIDPIEVIEE-VGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            +      +  +  D  R+FL++      +D  +  D L +  N      IG LV + ++
Sbjct: 377 GVFGDNAQQTGLSADVFRFFLLQSRPEGMEDTDFTWDRLVEVHNELFVGKIGKLVHKVLT 436

Query: 368 MILKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +             P   +  ++ +       ++L +    ++N  +   L   + L  
Sbjct: 437 DLNGVVPHSHDHINGPLLSSVGQTIKRFKGGVHKLLVQYVTQLKNSELRGGLMTTLELTC 496

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                 D      +  T+      VL V + ++  +  +L+ ++PK    ++++L V   
Sbjct: 497 GGIALLDLVSNRVML-TDTCERQAVLEVGINLVYLVVRMLEPYIPKTVESLYEVLGVERP 555

Query: 483 ----NRCFQSLDQRLKPGFMLHKT--FDPIFPRF 510
                + +      ++PG  + K    + +F R 
Sbjct: 556 TGRLEKDWLGDQGPIEPGHEVGKWEEVEALFERI 589


>gi|171680540|ref|XP_001905215.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939897|emb|CAP65123.1| unnamed protein product [Podospora anserina S mat+]
          Length = 663

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 113/534 (21%), Positives = 208/534 (38%), Gaps = 58/534 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  + I++A+ Y N  PH+G+    ++ AD  AR+ R  G + L+  GTDE+G      A
Sbjct: 73  KRNILITSALPYINNVPHLGNIIGSVLSADTFARYSRARGFNSLYIGGTDEYGTTTEARA 132

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                T +   D+       +     IS+D F RTT     +  + ++ K+ D G + + 
Sbjct: 133 LVENCTLQELCDKYYAIHAAVYKWFSISFDIFGRTTTPLQTEITQDIFLKLKDNGFLEER 192

Query: 123 CYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF------- 167
             +  Y  +   +           D  Y  A G   +     ++ +E             
Sbjct: 193 MTTQLYCEQHHLFLADRFVEGECPDCGYVDARGDQCDLCGKLLESLELIRPRCKVDGSVP 252

Query: 168 --RLSAYQDKLLSYYESHPEFILPIERRNEVIS---------FVKSGLKDLSLSRKTFDW 216
             + + +    L   +   E            S         ++K GL+  S++R    W
Sbjct: 253 VTKETKHIFLELDKLQPEVEAFFQESAAKGAWSSNGTSITAAWLKEGLQPRSITRD-LKW 311

Query: 217 GIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL---HVIGKDI 267
           G  +P       + ++Y W DA   +     +  N      K+W  P D+     +GKD 
Sbjct: 312 GTPVPTSLEGYEEKVIYSWFDA---WQVEILFHSNYTDQWEKWWRSPDDVQLYQFMGKDN 368

Query: 268 LRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDA 324
           + +H+I +PA  +  + P  K   + +  ++ ++G K SKS G  +      E EV  D 
Sbjct: 369 VVYHSIIFPATKIGTHEPWTKLHHLSTTDYLTYEGGKFSKSRGIGVFGDSARETEVPSDI 428

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAF 383
            R++L+       D  +  DG     N  L   +GN VSR V  I  + ++ ++P    +
Sbjct: 429 WRFYLLYCRPETGDSEFTWDGFISANNNLLLKNLGNFVSRVVKFINSRHFNNVVPDWTQY 488

Query: 384 TE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNP 441
            E S ++  +  +++L +  + +    +   L   + +    + +  A K    L +T P
Sbjct: 489 GEPSFDAFKADINQLLAQYIQELDGVKLRAGLLTALQISQRGNGFLQASKLDNSLYETQP 548

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            + + V      ++R  A      +P L     D +    E    Q L  R+KP
Sbjct: 549 AKCAAV------ILRANA------LPILEEWTADSIRPGHEISLSQHLFSRIKP 590


>gi|208780529|ref|ZP_03247869.1| methionyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743675|gb|EDZ89979.1| methionyl-tRNA synthetase [Francisella novicida FTG]
          Length = 619

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 101/486 (20%), Positives = 195/486 (40%), Gaps = 42/486 (8%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A++ G+T +  V + S          +I++D++  T    + +    ++ K+++K  
Sbjct: 1   MLKAKSLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNL 60

Query: 119 IYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFF 167
           I K   +  Y    + +  D            E   G   +   A ++P + +       
Sbjct: 61  ISKKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVIS 120

Query: 168 RLSAYQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             S  Q     ++                  +L  E  N++  + + GL+   +SR    
Sbjct: 121 GQSPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPY 180

Query: 216 WGIKIP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDI 267
           +G  IP  + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI
Sbjct: 181 FGFAIPGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDI 240

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY
Sbjct: 241 IYFHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRY 300

Query: 328 FLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   R  +   D   + +    + N+D+   + N+ SR    I K +D  +    +    
Sbjct: 301 YFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIF 356

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           D+ + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      + 
Sbjct: 357 DQELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKV 416

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V    + + + L   L+  +P +  +    L +  +   +    + L     + K F 
Sbjct: 417 HQVCSQGINMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFLT-NHKIDK-FK 472

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 473 PLATRI 478


>gi|328675609|gb|AEB28284.1| Methionyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 619

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 104/486 (21%), Positives = 198/486 (40%), Gaps = 42/486 (8%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A++ G+T +  V + S N +      +I++D++  T    + +    ++ K+++K  
Sbjct: 1   MLKAKSLGITPEELVAKYSNNHQRDFADFEINFDNYHSTHNTLNKEIVEDIYSKLNNKNL 60

Query: 119 IYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFF 167
           I K   +  Y    + +  D            E   G   +   A ++P + +  +    
Sbjct: 61  ISKKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPKSVVS 120

Query: 168 RLSAYQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +  Q     ++                  +L  E  N++  + + GL+   +SR    
Sbjct: 121 GKTPIQKNSEHFFFDLPALEKNIKDWIESNKLLQPEVANKLAEWFEQGLQSWDISRDAPY 180

Query: 216 WGIKIPDD-PQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDI 267
           +G  IPD   Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI
Sbjct: 181 FGFAIPDTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFDDFWGDSSSESELYHFIGKDI 240

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L S     P  +F++GF+   G+K+SKS G  I     +  +    LRY
Sbjct: 241 IYFHALFWPAILSSTGYKTPTSIFANGFLTVNGKKMSKSRGTFIQARTYLNNLKPSYLRY 300

Query: 328 FLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   R  +   D   + +    + N+D+   + N+ SR    I K +DG +         
Sbjct: 301 YFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIHKKFDGTLSN----EIF 356

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           D  + S  S+    I +  + +   +A+  ++SL  + +++ D  KPW+L K      + 
Sbjct: 357 DPKLESEFSKNHNSITQAFEKREFAQAVRLIMSLADKANQFIDYHKPWQLAKEEGQEQKV 416

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V    + + + L   L+  +P +  +    L +  E   +    + L     ++K F 
Sbjct: 417 HQVCSQGINMFKVLVNYLKPIIPSIVAEAERFLNI--EFISWDDAPRFLM-NHKINK-FK 472

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 473 PLATRI 478


>gi|328676534|gb|AEB27404.1| Methionyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 619

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 101/486 (20%), Positives = 194/486 (39%), Gaps = 42/486 (8%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A++ G+T +  V + S          +I++D++  T    + +    ++ K+++K  
Sbjct: 1   MLKAKSLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNL 60

Query: 119 IYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFF 167
           I K   +  Y    + +  D            E   G   +   A ++P + +       
Sbjct: 61  ISKKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVIS 120

Query: 168 RLSAYQDKLLSYY------------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             S  Q     ++                  +L  E  N++  + + GL+   +SR    
Sbjct: 121 GQSPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPY 180

Query: 216 WGIKIP-DDPQYIMYVWIDALTNYL-TTTGYLDNPDGSKAKFWPAD------LHVIGKDI 267
           +G  IP  + Q   YVW+DA   Y+ +   Y +  + +   FW          H IGKDI
Sbjct: 181 FGFAIPATNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGNSSSESELYHFIGKDI 240

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           + FHA++WPA L S     P  VF++GF+   G+K+SKS G  I     ++ +    LRY
Sbjct: 241 IYFHALFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRY 300

Query: 328 FLV-REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +   R  +   D   + +    + N+D+   + N+ SR    I K +D  +    +    
Sbjct: 301 YFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATL----SGEIF 356

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRA 444
           D  + S  S+    I +  + +    A+  +++L  + +++ D  KPW+L K      + 
Sbjct: 357 DPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKV 416

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V    + + + L   L+  +P +  +    L +  +   +    + L     + K F 
Sbjct: 417 HQVCSQGINMFKVLIAYLKPIIPSIVAEAERFLNI--QFISWADAPKFL-INHKIDK-FK 472

Query: 505 PIFPRF 510
           P+  R 
Sbjct: 473 PLATRI 478


>gi|145630903|ref|ZP_01786680.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983563|gb|EDJ91031.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 464

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 18/324 (5%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +  + +S L+   +SR    +G +IP       YVW+DA   Y+ +   L   +G     
Sbjct: 1   MQEWFESSLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNE 60

Query: 256 WPAD------LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
           + A+       H IGKDI+ FH+++WPA L  +    P  VF+HG++   G K+SKS G 
Sbjct: 61  FWAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFTHGYVTVDGAKMSKSRGT 120

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
            I     +  +  + LRY+   ++    +D  ++ D   +RVN D+ N + NL SR+   
Sbjct: 121 FIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNTDIVNKLVNLASRNAGF 180

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           I K ++G +         DE++ +  +   ++I    +++  ++A+ ++++L  + ++Y 
Sbjct: 181 IAKRFEGKLADK----LEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYI 236

Query: 429 DAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D + PW + K          V  + +E+ R L   L+  +PKLA +    L        +
Sbjct: 237 DEKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAE---LRW 293

Query: 487 QSLDQRLKPGFMLHKTFDPIFPRF 510
            ++ Q L  G  L   F  +F R 
Sbjct: 294 DNIHQPLL-GHTL-APFKALFSRL 315


>gi|302655666|ref|XP_003019618.1| hypothetical protein TRV_06336 [Trichophyton verrucosum HKI 0517]
 gi|291183353|gb|EFE38973.1| hypothetical protein TRV_06336 [Trichophyton verrucosum HKI 0517]
          Length = 600

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 105/547 (19%), Positives = 206/547 (37%), Gaps = 52/547 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +  + I++A+ + N  PH+G+                 G++ L+  GT E+G     
Sbjct: 9   VPGQRNILITSALPFVNNVPHLGNIIG------------GRGINTLYVGGTGEYGTTTEA 56

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A     T +   D+      ++ +  +IS+D F RTT +   +    ++ K+   G + 
Sbjct: 57  KALAENCTPQELCDKYHAIHAEIYEWFNISFDIFGRTTTQLQTEITLDIFLKLEKNGFLE 116

Query: 121 KGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQ---------HNPVQWMEEE 163
           +   +  Y     ++           D  Y  A G   +            NP   ++  
Sbjct: 117 ERMTTQLYCEEHHSFLADRFVEGECPDCGYANARGDQCDLCGQLLESLQLRNPRCKIDGS 176

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTF 214
               R + +    L   ++  E        N            S++K GLK  S++R   
Sbjct: 177 TPVTRDTKHIFLELDKLQAKVENFFQDSTANGSWSNNGAVITASWLKEGLKPRSITRD-I 235

Query: 215 DWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILR 269
            WG  + +P     ++Y W DA   Y++ T    +      +  P D+     IGKD + 
Sbjct: 236 SWGTRVPLPGYEDKVIYSWFDACIGYVSITARYTDQWERWWRS-PKDVQLYQFIGKDNVV 294

Query: 270 FHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALR 326
           FH++ +PA  +           + +  ++ ++G K SKS G  +      +  +  D  R
Sbjct: 295 FHSVIFPASQIGTEDTWTRLHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQKTGIPADIWR 354

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTE 385
            FL+       D  +  D      N  L   +GN VSR +  +  + Y+ ++P    + E
Sbjct: 355 CFLLSHRPETGDSEFTWDAFINCNNNLLLKNLGNFVSRVLKFVNSRHYNNIVPNWTQYLE 414

Query: 386 -SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK-PWELKKTNPDR 443
            S  +     +R+L +    +    I  A + V+ +  + + +    +    L +  P +
Sbjct: 415 GSFATFKEEINRLLAQYIRELDAVKIRSAWSTVLQISQQGNGFLQLNRLDNSLAENEPSK 474

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
            + V+ + +  +  LA L+  ++P  AN I   L         +     +KPG  +    
Sbjct: 475 CAAVIGIAINTVHLLASLVAPYMPDTANSINTQLRANLLLIPDRWNADSIKPGHEIG-RA 533

Query: 504 DPIFPRF 510
           + +F R 
Sbjct: 534 EHLFTRI 540


>gi|302501698|ref|XP_003012841.1| hypothetical protein ARB_01092 [Arthroderma benhamiae CBS 112371]
 gi|291176401|gb|EFE32201.1| hypothetical protein ARB_01092 [Arthroderma benhamiae CBS 112371]
          Length = 418

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 127/399 (31%), Positives = 193/399 (48%), Gaps = 42/399 (10%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-- 212
             V++ +E  Y F+LSA+QD+LL +Y  +P+FI P    + ++  V SGL+DLS+SR   
Sbjct: 17  KEVKFSQETNYHFKLSAFQDRLLEHYRKNPKFIQPKVYMDSIVQNVASGLQDLSISRPVD 76

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR--- 269
              WGI +P D    +YVW+DAL NY+T  GY   P   +   WPAD+HV+GKDI R   
Sbjct: 77  RLSWGIPVPGDTTQTIYVWLDALVNYITYAGYPFTPGREQESIWPADVHVVGKDITRCAI 136

Query: 270 ----------------FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
                           FH IYWPAFL++ +LPLP+ + +H        K+SKS GNV++P
Sbjct: 137 RMKAFNTHRYQLIPFRFHCIYWPAFLMALDLPLPRTILTHAHWTMNHSKMSKSTGNVVNP 196

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +  +   GVD +R++L        D  YD   + +     L  G+GNL SR +     + 
Sbjct: 197 MFAMARYGVDPMRFYLAMNGGLASDTDYDNSYIVRDYKNVLQGGLGNLCSRVMRGKGWNV 256

Query: 374 DGMIPTPG-------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
              +           A   S+   +    +V   +   M      RAL +++ ++ + +R
Sbjct: 257 RESVVKMTNGQGSRRAKDPSEIEHMEFLEKVPGLVSNQMDELNPRRALEEIVKIIDQTNR 316

Query: 427 YFDAQKPWELKK---TNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           Y  +  PW L K   T+P   D+   V+Y   E +R   ILLQ F+P+ A K+ D+L V 
Sbjct: 317 YVQSTGPWNLAKEAGTDPTAHDQLVGVIYNATESLRIAGILLQPFMPEKAKKLLDMLGVE 376

Query: 481 DE--NRCFQSLDQRLKP--GFMLHKTFDP----IFPRFL 511
           ++   R + +      P  G             +FP  L
Sbjct: 377 EDLSKRSYAAAKYGADPDYGTPRVPLGKGQAGTLFPPLL 415


>gi|116207612|ref|XP_001229615.1| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51]
 gi|88183696|gb|EAQ91164.1| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51]
          Length = 1117

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 96/504 (19%), Positives = 181/504 (35%), Gaps = 40/504 (7%)

Query: 31   ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS 90
            ADV ARF R  GL  ++  G+D++G      A + GV       +     +D+ D   + 
Sbjct: 524  ADVFARFCRARGLPTIYVCGSDQYGTATETKALSEGVDPATLCAKYHAIHKDIYDWFRLD 583

Query: 91   YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD--------EVY 142
            +D F RT    H    + ++ ++ + G I +   +  Y     ++  D            
Sbjct: 584  FDVFGRTPTDEHTAIVQDIFTRLWNNGYIEQRETTQAYCPTHSSFLADRYVEGECSLCHD 643

Query: 143  KGADGQYYNAQHNPVQWMEEEG-YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
            KGA G   +A  N +  +E E              L       +   P +R+ + +    
Sbjct: 644  KGARGDQCDACGNLLDPLEPERDASGNQETKATGWLINPRCKLDGTAPEKRQTKHLYLR- 702

Query: 202  SGLKDLSLSRKTFDWGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
              L  L    + +   ++     +   I + W+D               D       P  
Sbjct: 703  --LDALQGEIEEWLKTVEKAWSANCVSITHSWLDQGLKPR-----GITRDLKWGVPIPTG 755

Query: 260  LHVIGKD-------ILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHKGEKISKSLGNV 310
            L  +  +        + FH I +PA  L         K V +  ++ ++G K SKS G  
Sbjct: 756  LDGLSDEDYAKKVFYVWFHTIIFPASQLGTKENWTKIKAVSTCEYLNYEGGKFSKSKGVG 815

Query: 311  IDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            +      +  +  D  RY+L+       D  +  +      N DL   +GNL  R +   
Sbjct: 816  VFGTNARDTGIDADIWRYYLLSRRPETSDSEFKWEEFVDANNNDLLKNLGNLCQRIIKFC 875

Query: 370  LKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                DG++P        + +       ++LQ+   +++   +   L+ V+++    ++  
Sbjct: 876  QAKMDGVVPEYDLSKFPALQQHREEVEKLLQDYVAHLKAVKLRAGLSIVMNISGLGNKLL 935

Query: 429  DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
               K   +L    P+R   V+ + +  I  +A LL  ++P+ +  I   L V       Q
Sbjct: 936  QDNKLSNQLIAEEPERCRAVIGIALNHIHLVAHLLSPYMPEKSQSILRQLGVKGPGGDGQ 995

Query: 488  SLDQR---------LKPGFMLHKT 502
             +  +         LKPG  + + 
Sbjct: 996  DIPAQIPDTWEANDLKPGHAVGEP 1019


>gi|325973668|ref|YP_004250732.1| methionyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323652270|gb|ADX98352.1| methionyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 507

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 251/486 (51%), Gaps = 14/486 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ + I+T + Y +  PHIGHAY +II D++ ++H L  +      G DEHG+KI   A 
Sbjct: 2   KKDVLITTPLFYSSGDPHIGHAYTLIIGDLIKKYHELVNIKANLLAGVDEHGEKILTKAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T + FV+QNS  F++++  L+IS D F+RTT   H +  + ++K++ + G IYK  
Sbjct: 62  EVGLTVEEFVEQNSSKFKNLSSTLEISPDYFVRTTNDFHKEYAKKVFKELLELGKIYKSS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +SG+  +  E  Y++    +    +      + +   EE+ YFF+++ +    L  +  +
Sbjct: 122 WSGYKCINCETNYSNKYYSQKNKCEL----GHELIKKEEDTYFFKITEF-VSWLKEHYKN 176

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            + I P     ++       L+DLS++R   DWGIK+ D P++ +YVW +AL  Y++T  
Sbjct: 177 KDIIFPARYLKDLHEGFFPSLEDLSITRSKLDWGIKLDDSPEFTLYVWFEALLGYISTDS 236

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             +    + +      + +IGK+I RFH+IY PA L    L  P K+  HG++L+   KI
Sbjct: 237 VREKHWLTSSDT--KIIQIIGKEIFRFHSIYCPAILSLKKLKTPDKLLVHGWLLNDNRKI 294

Query: 304 SKSLGN--VIDPIE-VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           SKS  N   I P+  +I++  +++++++ +  +   +D  + +D LK+  N  L N +GN
Sbjct: 295 SKSDPNSKAIPPLNSLIKQYNLESIKWYFL-SLNWEEDHPFSEDLLKQSYNKYLVNLLGN 353

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R   +I K +Y           E  +  + + +  L +  + + N  I   +++   
Sbjct: 354 LINRFKGIISKQEYITSSINSEFKNEQIKKEVELSNEFLTKFTDLVINIKIPEIISRAKQ 413

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA-FVPKLANKIFDILF 478
           L++  + + +  +PW+L K + D    +       +  ++ LL   F  K   +I + L 
Sbjct: 414 LLNSANFFLNHLEPWKLPKDSQDY-KEINVFLYRQLILISFLLSPIFTEKKWEEIKNSLS 472

Query: 479 VADENR 484
           +  E +
Sbjct: 473 INWERK 478


>gi|325990111|ref|YP_004249810.1| methionyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323575196|emb|CBZ40861.1| Methionyl-tRNA synthetase [Mycoplasma suis]
          Length = 507

 Score =  226 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 252/486 (51%), Gaps = 14/486 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ + I+T + Y +  PHIGHAY +II D++ ++H L  +      G DEHG+KI   A 
Sbjct: 2   KKDVLITTPLFYSSGDPHIGHAYTLIIGDLIKKYHELVNIKANLLAGVDEHGEKILTKAT 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T + FV++NS  F++++  L+IS D F+RTT   H +  + ++K++ + G IYK  
Sbjct: 62  EVGLTVEEFVEKNSSKFKNLSSTLEISPDYFVRTTNDFHKEYAKKVFKELLELGKIYKSS 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           +SG+  +  E  Y++    +    +      + +   EE+ YFF+++ +    L  + ++
Sbjct: 122 WSGYKCINCETNYSNKYYSQKNKCEL----GHELIKKEEDTYFFKITEF-VSWLKEHYAN 176

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
              I P     ++       L+DLS++R   DWGIK+ D P++ +YVW +AL  Y++T  
Sbjct: 177 KNIIFPARYLKDLHEGFFPSLEDLSITRSKLDWGIKLDDSPEFTLYVWFEALLGYISTDS 236

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
             +    + +      + +IGK+I RFH+IY+PA L    L  P K+  HG++L+   KI
Sbjct: 237 VREKHWLTSSDT--KIIQIIGKEIFRFHSIYYPAILSLKKLKTPDKLLVHGWLLNDNRKI 294

Query: 304 SKSLGN--VIDPIE-VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           SKS  N   I P+  +IE+  +++++++ +  +   +D  + +D LK+  N  L N +GN
Sbjct: 295 SKSDPNSKAIPPLNSLIEQYNLESIKWYFL-SLNWEEDHPFSEDLLKQSYNKYLVNLLGN 353

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           L++R   +I K +Y           E  +  + + +  L ++ + + N  I   +++   
Sbjct: 354 LINRFKGIISKQEYITSSINSEFKNEQIKKEIELSNEFLTKLTDLVINIKIPEIISRAKQ 413

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA-FVPKLANKIFDILF 478
           L++  +   +  +PW+L K + D    +       +  ++ LL   F  K   +I + L 
Sbjct: 414 LLNSANFLLNHLEPWKLPKDSQDY-KEINVFLYRQLILISFLLSPIFTEKKWEEIKNSLS 472

Query: 479 VADENR 484
           +  E +
Sbjct: 473 INWERK 478


>gi|72026470|ref|XP_798583.1| PREDICTED: similar to MGC69150 protein, partial [Strongylocentrotus
           purpuratus]
 gi|115925072|ref|XP_001197290.1| PREDICTED: similar to MGC69150 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 549

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 89/440 (20%), Positives = 168/440 (38%), Gaps = 40/440 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + I++A+ Y N  PH+G     ++  DV +RF RL   + L+  GTDE+G      A 
Sbjct: 112 KNILITSALPYVNNVPHLGTIIGCVLSGDVFSRFCRLRNYNTLYICGTDEYGTATETKAL 171

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+T +   D+     RD+    +I +D F RTT ++  +  + ++ ++   G I +  
Sbjct: 172 EEGLTPQQICDKYHALHRDIYKWFNIDFDHFGRTTTQKQTEIAQDIFHRLHAAGHILEDT 231

Query: 124 YSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEG------YF 166
                  +   +  D  V            +G          N     +           
Sbjct: 232 VEQLQCQKCNRFLADRFVEGICPLCSYEDARGDQCDKCGKLINATDLKKPRCKVCSNTPV 291

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI---------SFVKSGLKDLSLSRKTFDWG 217
            + S +    L       E  L                  S+V+ GLK   ++R    WG
Sbjct: 292 IKTSRHLFLDLPKLAPALEVFLQKSTSEGNWSANAKLITNSWVRDGLKPRCITRD-LKWG 350

Query: 218 --IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH---VIGKDILRFHA 272
             + +      + YVW DA   Y + T    +      K  P  +     + KD + FH+
Sbjct: 351 TPVPLKGYTDKVFYVWYDAPIGYPSITANYTDQWEKWWKN-PQQVQLYNFMAKDNVPFHS 409

Query: 273 IYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFL 329
           + +P+ L+ A  N  +   + +  ++ ++  K SKS G  +         +  D  R++L
Sbjct: 410 VIFPSCLIGANDNYTMVNHLIATEYLNYEDTKFSKSRGIGVFGDNAQSTGIPADIWRFYL 469

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS--MILKDYDGMIPTPGAFTESD 387
           +      +D  +       + N++L N +GN ++RSV    +   +  +IP        D
Sbjct: 470 LYIRPETQDSAFSWADFVWKNNSELLNNLGNFINRSVGLTFLENSFGSVIPEI-RLESED 528

Query: 388 ESILSVCSRVLQEIRENMQN 407
           E +++  +R L+      + 
Sbjct: 529 ERLIAEINRELKSYIALQEK 548


>gi|148977648|ref|ZP_01814224.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963163|gb|EDK28431.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 486

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 19/333 (5%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+ +   L +
Sbjct: 11  LQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCD 70

Query: 248 PDGS--KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
                   ++W  D      H IGKDI+ FH+++WPA L  +    P  VF HG++   G
Sbjct: 71  KRDDLDFNEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSGFRKPNNVFVHGYVTVNG 130

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIG 359
            K+SKS G  I     +  +  + LRY+   +  +   D   + +   +RVNAD+ N I 
Sbjct: 131 AKMSKSKGTFIKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQRVNADVVNKIV 190

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           NL SR+   I K ++G +    A  E    + +      + I E  + +   RA+ ++ +
Sbjct: 191 NLASRNAGFITKRFEGKLAAEFAEPE----LYNEFVAAAERIGELYETREFSRAIREITA 246

Query: 420 LVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L  + ++Y D + PW L K          V  V + + R L   L+  +P+LA +    L
Sbjct: 247 LADKANQYIDEKAPWVLAKEEGKEKELQEVSSVGINLFRVLMAYLKPVMPELAARTEAFL 306

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               E   ++ +   L     + K F  +F R 
Sbjct: 307 N---EELTWEGVATPLT-DHEITK-FKALFSRI 334


>gi|169604544|ref|XP_001795693.1| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15]
 gi|160706593|gb|EAT87677.2| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15]
          Length = 559

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 95/522 (18%), Positives = 181/522 (34%), Gaps = 77/522 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ ADV ARF R  G + L+  GTDE+G    
Sbjct: 11  VEGERNVLITSALPYVNNVPHLGNIIGSVLSADVFARFARARGYNTLYVCGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A    VT +   D+      ++ +  +IS+D F RT  +   D  + ++KK+   G +
Sbjct: 71  TKAIEEKVTPQQLCDKYFALHSEVYEWFNISFDHFGRTPTQHQTDIAQDIFKKLYKNGYL 130

Query: 120 YKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +   +  Y    +++  D           Y+ A G   +   + +  +E +    +L  
Sbjct: 131 EEQTTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLLDPLELKNPRCKLDG 190

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
                +     H    L   +  E   F K+  +    S      GI+I          W
Sbjct: 191 --ATPVPRETKHVYLCLDKLQPKEEEWFKKASQEGNWSSN-----GIQITAS-------W 236

Query: 232 IDALTNYLTTTG---YLDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLP 285
           +         T    +       K    P  +     +GKD + FH + +P   +     
Sbjct: 237 LKEGLRPRGITRDLKWGTAVPLEKWWHNPEQVKLYQFMGKDNVPFHTVVFPCSQIGTGDK 296

Query: 286 LP--KKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYD 342
                 + +  ++ ++  K SKS    +      +  +  D  RY+L+       D  ++
Sbjct: 297 WTMLNTISTTEYLNYEKGKFSKSRNIGVFGNNAKDTGIPSDVWRYYLLSHRPETGDTEFE 356

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            DG     N +L   +GN V+R +  +   +           + +               
Sbjct: 357 WDGFIAANNNELLKNLGNFVNRVIKFVNSKHFTSRAKETQLLQDNR-------------- 402

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             + N                           +L   +P+R + V+ + +  I  LA L+
Sbjct: 403 --LDN---------------------------KLATEHPERCAAVVGLALSHIHLLASLI 433

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTF 503
           Q ++P     I   L  A+        + R L  G  +    
Sbjct: 434 QPYMPDTTASILSQLN-AEFLIIPDDWEARSLPVGHKIGTAG 474


>gi|326429852|gb|EGD75422.1| methionyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 494

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 94/454 (20%), Positives = 187/454 (41%), Gaps = 41/454 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K +  + I++A+ Y N  PH+G+    ++ ADV ARF RL   + LF  GTDE+G    
Sbjct: 11  IKGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARFCRLRDYNTLFICGTDEYGTATE 70

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+  K   D+     +++ D  +IS+D F RT+ ++  +  + ++      G I
Sbjct: 71  TKAIAEGLEPKQICDKYHAIHKEVYDWFNISFDYFGRTSTEKQTEVTQEIFWACHKNGFI 130

Query: 120 YKGCYSGWYSLRDEAYY--------NDDEVYKGADGQYYNAQHNPVQWMEE--------- 162
            +     WY    +++           D  Y  A G   +   +P+   +          
Sbjct: 131 TQKDEEQWYCESCDSFLADRFVEGTCPDCGYTDARGDQCDECGHPLHAHQLKDPRCKYRK 190

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLS 210
              +    R S +    L   +   +                ++   S+   GL+  +++
Sbjct: 191 DCGKTPQLRTSTHLYLCLDKLQPEMQAYFAQAVEKGVWSANAQDITQSWFDRGLEPRAIT 250

Query: 211 RKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGK 265
           R    WG  +P +     + YVW DA   Y++ T    +      +  P D+     + K
Sbjct: 251 RD-LKWGTPVPLEGFTDKVFYVWFDATIGYISITANYTDEWQQWWRN-PDDVQLYQFMAK 308

Query: 266 DILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGV 322
           D + FH+I +P+ L+       K   + +  ++ ++  + SKS G  +      E  +  
Sbjct: 309 DNVLFHSIIFPSSLIGTRETWTKVNHLSATEYLNYEDRQFSKSRGVGVFGNNAQESGIPA 368

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+       D  +D   L  + N +L N +GN V R+++   K +D  + T   
Sbjct: 369 DVYRFYLLYIRPETADTHFDWADLIAKHNNELLNNLGNFVHRALTFSAKFFDSKM-TQVV 427

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            T+ D+  ++  +  + +  + +++  +  A  +
Sbjct: 428 LTDEDKESIAAINEEVGQQAKALRDLRVANASEE 461


>gi|121534137|ref|ZP_01665962.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307240|gb|EAX48157.1| valyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 884

 Score =  220 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 90/419 (21%), Positives = 158/419 (37%), Gaps = 38/419 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L+++ Y    + +  + G         V+ +  + +F R+    
Sbjct: 313 YAGMDRYECRQVLVRDLKEQGYLVRIDEHVHSVGH-CQRCSTVVEPLISKQWFVRMKPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
           +  +    S     +P       I++++  ++D  +SR+ +                   
Sbjct: 372 EPAIEAVASGKIKFVPERFTKIYINWLE-NIRDWCISRQIWWGHRIPAWYCECGETIVSR 430

Query: 216 --------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                    G K+  DP  ++  W  +     +T G+ +      A F+P  + V G DI
Sbjct: 431 EDVSCCPKCGGKVEQDPD-VLDTWFSSALWPFSTMGWPEKTA-ELAHFYPTSVLVTGYDI 488

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN IDP+EVIE+ G D L
Sbjct: 489 IFFWVARMVFMAMEFQREIPFRYVFIHGLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTL 548

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFT 384
           R+ LV     G D  +  + ++   N   AN I N  SR V M L  +D    P P  F 
Sbjct: 549 RFTLVTGNTPGNDMRFYWERVESSRN--FANKIWN-ASRFVLMNLDGFDAAAQPDPARFA 605

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
            +D  ILS  ++ + ++  N++   +  A   +   +     D Y +  K    +K N  
Sbjct: 606 LADRWILSRYAQTVADVTANLEKFELGEAARLLYEFIWNEYCDWYIELTKGRLYRKENAQ 665

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
              T  YV   V+R    LL  F+P +   I+  L    ++       +       +  
Sbjct: 666 DRETAQYVLWYVLRGTLELLHPFMPFITEAIWQALPHDGKSIVVAPWPKEQPELIDVEA 724



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I         Q H+GHA +  + D+L RF R+ G + L+  GTD  G       
Sbjct: 36  DKEPFSIVIPPPNVTGQLHMGHALDNTLQDILIRFKRMQGYNTLWMPGTDHAGIATQIKV 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        +  Q           L  S D      T ++    
Sbjct: 96  EEMLAKEGLTRYDLGREKFIDRVWEWKRQYGSRIIKQLKSLGASCDWVRERFTMDEGCSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             R ++  + +KG IY+G     +  R +   +D EV       +      PV+ M+ E
Sbjct: 156 AVREVFVSLYEKGLIYQGNRITNWCPRCKTALSDIEVEHEEKSGHLYHVRYPVEGMDGE 214


>gi|167933048|ref|ZP_02520135.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7b]
          Length = 336

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 125/354 (35%), Positives = 189/354 (53%), Gaps = 38/354 (10%)

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIP 221
            Y+FRL+ +  ++ +  E++   I P  R+ EV++ +  G++DLS+SR      WG+ +P
Sbjct: 1   NYYFRLTHFVPQIRNAIENNEIKIFPESRKKEVLNLLNDGIEDLSVSRPRKNLAWGVSVP 60

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            D   ++YVWIDAL+NY+T  GY D+       +WPA++ V+GKDILRFHAI WPA L++
Sbjct: 61  GDDNQVIYVWIDALSNYITVLGYPDDESWRD--YWPANVQVVGKDILRFHAIIWPAILMA 118

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             LPLPK++  HG I   G+K+SKSLGNV+ P EVI+  G DA RY+  R+I    DG +
Sbjct: 119 LGLPLPKQILVHGHIGFDGKKMSKSLGNVVSPNEVIDTYGADAFRYYFRRQIPTLDDGDF 178

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             +  +K  N +L N +GNLV R   M+L+   G++             L+     +Q  
Sbjct: 179 TWEKFEKAYNNELGNDLGNLVQRVAKMVLRYQAGVVGE-----------LNRGEHDIQLY 227

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEVIR 456
           R+ M       A+ QV   +   ++Y +  KPWE+ K   D       S +L   V  I 
Sbjct: 228 RDAMDEMRFSDAIDQVWGKIRATNQYLEQVKPWEVAKNKDDPESTEHLSDILQDAVGSIM 287

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           Q+A LL  F+P+ ++KI   +F                    +  + DPIFP+ 
Sbjct: 288 QIADLLVPFLPEASSKI-KAIFAEG-----------------VVSSSDPIFPKI 323


>gi|149513066|ref|XP_001515174.1| PREDICTED: similar to Methionine-tRNA synthetase, partial
           [Ornithorhynchus anatinus]
          Length = 761

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 87/398 (21%), Positives = 160/398 (40%), Gaps = 37/398 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 366 VPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYARLRQWNTLYVCGTDEYGTATE 425

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+       +     IS+D F RTT  +     + +++++  +G +
Sbjct: 426 TKAMEEGLTPQQICDKYHALHATIYRWFAISFDHFGRTTTPQQTTIAQDIFQRLLARGFL 485

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
           +    +     R   +  D  V            +G          N V+  + +    R
Sbjct: 486 HTATVAQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKICR 545

Query: 169 LSA------YQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
            +       +    L   E   E                R    S+++ GLK   ++R  
Sbjct: 546 STPEVKSSRHLFLDLPQLEKRLEPWLTKTLAASDWTPNARFITRSWLRDGLKPRCITRD- 604

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDIL 268
             WG  +P +   + + YVW DA   YL+ T    +      K  P  +     + KD +
Sbjct: 605 LQWGTPVPLEDFQEKVFYVWFDAPIGYLSITATYTDQWERWWKN-PEQVELYQFMAKDNV 663

Query: 269 RFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDAL 325
            FH++ +P  LL A  N  L   + +  ++ ++  K SKS G  +         +  D  
Sbjct: 664 PFHSVVFPCSLLGAEDNYTLVNHLIATEYLNYEDGKFSKSRGVGVFGDMAQGTGIPADIW 723

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           R++L+     G+D  +    L+ + N++L N +GN ++
Sbjct: 724 RFYLLFVRPEGQDSAFSWADLQLKNNSELLNNLGNFIN 761


>gi|313235831|emb|CBY19815.1| unnamed protein product [Oikopleura dioica]
          Length = 479

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 136/448 (30%), Positives = 217/448 (48%), Gaps = 43/448 (9%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++  I Y  + PHIGH +  +I D   R+++++ +   F+ GTDEHGQKI ++A   G 
Sbjct: 43  FVTCPIYYATSSPHIGHIHSSVIGDFYHRWNKINDVASKFSLGTDEHGQKIIRSAAQQGY 102

Query: 68  -TTKVFVDQNSRNFRDMADVLDIS---YDD--FIRTTEKRHHDTCRILWKKISDKGDIYK 121
              ++ V+  S  +R       IS    DD  F+RTT   HH   + LW ++  KG I  
Sbjct: 103 DHPEILVNNISDLYRRTFKKFSISVASLDDAIFMRTTTSEHHQAAQKLWTRLRSKGFIKM 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G                            + ++W+ EE Y F    + +++ S+  
Sbjct: 163 QNYEG-----------------------CAVNGHKLEWVSEENYIFEFEPFLNEIESWIV 199

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYL 239
                       +E+    K+G   LS+SR      WG+ +P+D  + MYVW +AL NYL
Sbjct: 200 KAVAPDAAKILIDELKDRRKTGNMSLSISRPRNRVPWGVAVPNDANHTMYVWFEALINYL 259

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           T  GY  + + +  +FWP  L VIG DI RFH I+WPA LL+A LPLPKKVF HG     
Sbjct: 260 TAAGYGKHDNNAL-EFWPPQLQVIGIDIARFHCIFWPAMLLAAELPLPKKVFVHGHWTRD 318

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDA-LRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G K+SKSL N + P E++E VG  +    +   + A  K+  +  + L+ + +ADLAN I
Sbjct: 319 GMKMSKSLDNFVTPKELLELVGNQSDAVRWFCLKHATLKNVDFQDELLRIQSDADLANKI 378

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES-------DESILSVCSRVLQEIRENMQNQLIH 411
            NL+SR+ S   K+ +     P  F +S       ++ ++     + +     +    + 
Sbjct: 379 ANLLSRTTS---KNLNPSGAYPTLFPDSLLNAPDGEKYLIETVQGLPELYASFVNAGQLP 435

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKT 439
            A+  VI  + E  ++   +K ++L + 
Sbjct: 436 NAMNCVIRAIEEGLQFMTNEKIFKLDRD 463


>gi|212638460|ref|YP_002314980.1| valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|254783550|sp|B7GH39|SYV_ANOFW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|212559940|gb|ACJ32995.1| Valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 875

 Score =  216 bits (549), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 141/364 (38%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   ++  +     ER  +        ++D  +SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAEAAIEQQKTEGKVNFVPERFEKTYLHWMENIRDWCISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  Q ++  W  +     +T G+ D       
Sbjct: 410 GHRIPAWYHKETGEVYVDHEPPADIENWEQDQDVLDTWFSSALWPFSTMGWPDKTSADYN 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + + A   +   P    +        +G K+SKSLGN +
Sbjct: 470 RYYPTDVLVTGYDIIFFWVSRMIFQALEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N    N I N  SR   M ++
Sbjct: 530 DPMDVIDQYGADSLRYFLATGSSPGQDLRFSTEKVEATWN--FVNKIWN-ASRFALMNME 586

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            +        G  + +D  IL+  +  ++ + +             + + + +   D Y 
Sbjct: 587 GFTYEDIDLHGEKSVADHWILTRLNETIETVTKLADKYEFGEVGRVLYNFIWDDLCDWYI 646

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V   V+ Q   LL  F+P +  +I+  L    E+    
Sbjct: 647 EMAKLP--LYGDDEQAKKTTRSVLAYVLDQTMRLLHPFMPFVTEEIWQQLPHEGESITVA 704

Query: 488 SLDQ 491
           S  Q
Sbjct: 705 SWPQ 708



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 32  ETKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAK 91

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            +                     T  + ++ + + R       L + Y     T ++   
Sbjct: 92  VEEKLRNEGKTRYDLGREKFVEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 152 KAVREVFVSLYKKGLIYRGEYIINWDPVTKTALSDIEVVY 191


>gi|89895934|ref|YP_519421.1| valyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89335382|dbj|BAE84977.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 881

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 148/374 (39%), Gaps = 40/374 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+ M  + +F ++       +          +P  R  ++       ++D  +
Sbjct: 348 CYRCSTVVEPMVSKQWFVKMEPLAKPAMEVVREGIMEFVPE-RFAKIYLGWLENIRDWCI 406

Query: 210 SRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDALTNYLTT 241
           SR+   WG  I +                                ++  W  +     +T
Sbjct: 407 SRQ-LWWGHRIPVWYCEDCGAEICAKEDPETCPECGSKHIVQDPDVLDTWFSSGLWPFST 465

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +     K +F+P  + V G+DI+ F    + +       ++P  K +     +  +
Sbjct: 466 MGWPEETPELK-QFYPTSVLVTGRDIIFFWVARMVFMGLEFMKDMPFQKVMIHGLVLDAQ 524

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN +DP+EVI++ G D LR+ L+     G D  +  + L+   N   AN I 
Sbjct: 525 GRKMSKSLGNGVDPLEVIDQYGADTLRFMLITGNTPGNDLRFHPERLEATRN--FANKIW 582

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V + L+DY+      G     D  ILS   +   E+ E ++   +  A   +  
Sbjct: 583 N-ASRFVLLNLQDYEEGPR--GQLKLEDRWILSRYEKTAGEVTEALEKFDLGEAARLLYE 639

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     D Y +  K     K +P+   TV  + +EV+     LL  ++P +  +I+  L
Sbjct: 640 FIWNEFCDWYIELAKGRLYDKEHPEARHTVQSILLEVLEGTMRLLHPYMPFITEEIWHNL 699

Query: 478 FVADENRCFQSLDQ 491
            ++ E+   QS  +
Sbjct: 700 PISGESIMIQSWPK 713



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 22/179 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E   I           H+GHA +  I D+L RF R+ G + L+  GTD  G       +
Sbjct: 38  KEPFSIVMPPPNVTGALHLGHAIDSTIQDILTRFKRMQGYNTLWLPGTDHAGIATQAKVE 97

Query: 64  NAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                     K +  + ++  R +    D S + F  T ++   
Sbjct: 98  EQLAKEGTNRHALGREKFLDRVWDWKKEYGGRITQQLRRLGASCDWSRERF--TMDEGCS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  R ++  +  KG IY+G Y   +        +D EV       +      PV+  +E
Sbjct: 156 EAVREVFVDLYHKGLIYRGNYIVNWCPHCHTTISDIEVEHVDREGHLWHLRYPVKDSDE 214


>gi|219670367|ref|YP_002460802.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219540627|gb|ACL22366.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 881

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 148/374 (39%), Gaps = 40/374 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+ M  + +F ++       +          +P  R  ++       ++D  +
Sbjct: 348 CYRCSTVVEPMVSKQWFVKMEPLAKPAMEVVREGIMEFVPE-RFAKIYLGWLENIRDWCI 406

Query: 210 SRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDALTNYLTT 241
           SR+   WG  I +                                ++  W  +     +T
Sbjct: 407 SRQ-LWWGHRIPVWYCEDCGAEICAKEDPETCPECGSKHIVQDPDVLDTWFSSGLWPFST 465

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +     K +F+P  + V G+DI+ F    + +       ++P  K +     +  +
Sbjct: 466 MGWPEETPELK-QFYPTSVLVTGRDIIFFWVARMVFMGLEFMKDVPFQKVMIHGLVLDAQ 524

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN +DP+EVI++ G D LR+ L+     G D  +  + L+   N   AN I 
Sbjct: 525 GRKMSKSLGNGVDPLEVIDQYGADTLRFMLITGNTPGNDLRFHPERLEATRN--FANKIW 582

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V + L+DY+      G     D  ILS   +   E+ E ++   +  A   +  
Sbjct: 583 N-ASRFVLLNLQDYEEGPR--GQLKLEDRWILSRYEKTAGEVTEALEQFDLGEAARLLYE 639

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     D Y +  K     K +P+   TV  + +EV+     LL  ++P +  +I+  L
Sbjct: 640 FIWNEFCDWYIELAKGCLYDKEHPEARHTVQSILLEVLEGTMRLLHPYMPFITEEIWHNL 699

Query: 478 FVADENRCFQSLDQ 491
            ++ E+   QS  +
Sbjct: 700 PISGESIMIQSWPK 713



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 22/179 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E   I           H+GHA +  I D+L RF R+ G + L+  GTD  G       +
Sbjct: 38  KEPFSIVMPPPNVTGALHLGHAIDSTIQDILTRFKRMQGYNTLWLPGTDHAGIATQAKVE 97

Query: 64  NAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                     K +  + ++  R +    D S + F  T ++   
Sbjct: 98  EQLAKEGTNRQALGREKFLDRVWDWKKEYGGRITQQLRRLGASCDWSRERF--TMDEGCS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  R ++  +  KG IY+G Y   +        +D EV       +      PV+  +E
Sbjct: 156 EAVREVFVDLYHKGLIYRGNYIVNWCPHCHTTISDIEVEHVDREGHLWHLRYPVKDSDE 214


>gi|261418346|ref|YP_003252028.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767695|ref|YP_004133196.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374803|gb|ACX77546.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112561|gb|ADU95053.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 880

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 140/365 (38%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   ++  +     ER  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPFSTMGWPDVESPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  ++ + +  +      A   + + + +   D Y
Sbjct: 591 GGMTYEELDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGEAGRTLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITV 708

Query: 487 QSLDQ 491
               Q
Sbjct: 709 APWPQ 713



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  NKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRQQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVY 196


>gi|156086356|ref|XP_001610587.1| methionyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797840|gb|EDO07019.1| methionyl-tRNA synthetase, putative [Babesia bovis]
          Length = 522

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 27/467 (5%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            ++T + Y N   H+GHAY ++ AD + ++++L G  +L  +GTDEHG KIA AAQ  G 
Sbjct: 37  LLTTPLFYLNDPLHVGHAYTLVSADAIKKYYKLLGRTILILSGTDEHGTKIANAAQTNGE 96

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
             ++F+++  +++ D+ +  D+S D  + T+ ++H +  +  +  + +KGDIY+G + G+
Sbjct: 97  KPEIFIERMRQHYTDVYEAYDVSVDINVHTSLEQHKEKVKKTFGYLLEKGDIYEGVHKGY 156

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           +S  +E YY + ++  G     ++     V  + E+ YFFRLS Y+D  L        FI
Sbjct: 157 FSPTEETYYTEFQLINGKSPLGFD-----VYPVAEKAYFFRLSKYKD-ALLQLIKREGFI 210

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYL 245
           +P ER+NE I  +   L D++++R    WG+ +       + +YVW+DAL  Y       
Sbjct: 211 VPKERQNEAIGLLSGNLPDIAITRSNTTWGVPVGQPGFEGHTIYVWLDALLGYCIDRNQY 270

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                         L + GKDILRF  + WPA L++  +P+P+++  HG+++   EKISK
Sbjct: 271 GVGT--------ETLMLFGKDILRFMTLVWPALLMALEMPMPQQMVCHGWLMSNDEKISK 322

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S G+ +    +      D  R+ L+   A G+D  Y+   ++   N  + +   NL  R 
Sbjct: 323 SKGDKVFA--LPPIGTSDVSRFVLMNLGAFGEDIQYNPKRVEDMKNI-VRDKYANLTYRL 379

Query: 366 VSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             MI K    +             E I       LQ I   M++  I + + +V  +   
Sbjct: 380 TGMIDKRGILEINHRDTECINHFVEGITKKW-ECLQNI---MEHHRIDKYVNEVTEVAGC 435

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++ Y   ++ W+L   + D   +      + +  L+  +   +P+L 
Sbjct: 436 INSYITHKQVWDLH--DEDEFQSHALAICQSLLVLSAYIYPIMPQLT 480


>gi|229543663|ref|ZP_04432723.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328083|gb|EEN93758.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 881

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/371 (21%), Positives = 142/371 (38%), Gaps = 40/371 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D  +    S  +     ER  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADAAVKLQASEGKVHFVPERFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEVYVDTEPPRDIENWEQDPD-VLDTWFSSALWPFSTMGWPDEEAKDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D  V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDTLVTGYDIIFFWVSRMIFQGLAFTGKRPFKDVLIHGLVRDEQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVI++ G D+LRYFL    A G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMEVIDKYGADSLRYFLTTGSAPGQDLRFSYEKVEAVWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  + +D+ IL+  +  ++ + +         A   + + + +   D Y
Sbjct: 591 NGLKYEEMDLSGEKSVADKWILTRLNETIETVTKLADKYEFGEAGRALYNFIWDDFCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC- 485
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYSEDEAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHQGESITT 708

Query: 486 --FQSLDQRLK 494
             +  +D+ L 
Sbjct: 709 AAWPEVDESLT 719



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           E++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 38  EKKPYTIVIPPPNVTGKLHLGHAWDTALQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 59  ----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                            K  + A      +     + +  +   LD S + F  T ++  
Sbjct: 98  EAKLREEGKSRYDLGREKFTEEAWKWKAEYAQFIRKQWAKLGLGLDYSRERF--TLDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 156 SKAVKEVFVSLYKKGLIYRGEYIINWDPETKTALSDIEVVY 196


>gi|194017123|ref|ZP_03055735.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010991|gb|EDW20561.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 880

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 151/407 (37%), Gaps = 36/407 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L++E      E +  + G    +    V+      +F ++    
Sbjct: 314 YKGMDRFECRKQLVKDLQEEGILFKIEDHMHSVGHSERSGA-VVEPYLSTQWFVKMQPLA 372

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
           D+ ++      +     +R  +        ++D  +SR+   WG +I             
Sbjct: 373 DEAINLQNGDDQVQFVPDRFEKTYLHWMENIRDWCISRQ-LWWGHRIPAWYHKETKEVYV 431

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +    ++  W  +     +T G+ D       +++P +L V G DI+ F
Sbjct: 432 GLEAPEDIENWEQDNDVLDTWFSSALWPFSTMGWPDADSEDFKRYYPTNLLVTGYDIIFF 491

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +        +G K+SKSLGN IDP+EVI++ G D+LRYF
Sbjct: 492 WVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADSLRYF 551

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G+D  +  + ++   N   AN I N  SR   M +           G  + +D
Sbjct: 552 LATGSSPGQDLRFSFEKVESTWN--FANKIWN-ASRFALMNMDGLTYDELDLTGEKSVAD 608

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+  +  ++ + +             + + + +   D Y +  K P  L   +    
Sbjct: 609 QWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAKLP--LYGEDEAAK 666

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            T   +   V+ Q   LL  F+P L  +I+  L    E+    +  +
Sbjct: 667 KTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITVAAWPE 713



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  KTKDPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     + +  D      T ++  +
Sbjct: 97  VEAKLREEGVSRYDLGREKFVEGTWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLN 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVRQVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|71992781|ref|NP_740948.2| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
 gi|31442025|emb|CAD21672.2| C. elegans protein Y105E8A.20a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 406

 Score =  213 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 129/402 (32%), Positives = 208/402 (51%), Gaps = 22/402 (5%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-----GADGQYYNAQHNPVQWMEEEGYFF 167
           I D G IYK  YSG+YS+ DE +  +++V K     GA+     +   PV+W+EEE Y F
Sbjct: 3   IQDNGYIYKSTYSGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMF 62

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-GLKDLSLSRKTFDWGIKIPDDPQY 226
           RLS +++K+  +       + P + ++  ++ ++      +S SR    WGI +P+DP  
Sbjct: 63  RLSEFREKVAEWINRENIVVHPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQ 122

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
            +YVW+DAL NYLT TG+ +         WP    VIGKDI +FH  YWPAFL++A L L
Sbjct: 123 TIYVWLDALVNYLTVTGFPNAQSV-----WPPTCQVIGKDITKFHLYYWPAFLMAAGLSL 177

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+KVF HG  L    K+SKSLGNV++P E I +   + LRYFL++      D  ++ +  
Sbjct: 178 PQKVFIHGHWLIDNVKMSKSLGNVVNPSEAITKFTAEGLRYFLLKHGNPSYDCSFNWNSC 237

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE--- 403
            + +N+DL N +GNL++RS   + K     +       + +  I     ++++ + E   
Sbjct: 238 LQTINSDLVNNVGNLLNRST--VEKINKEGMYPKMEIEDIEAEIRENAKKLMEMVEESRE 295

Query: 404 ----NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
                       + +  ++  + E +R F + +PW+  + +  R  ++L+VT + IR + 
Sbjct: 296 NCVDLYDEMSYFKIIENLMLTMKEANRLFQSSQPWK--EIDEKRLKSLLFVTYDTIRVVT 353

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           ILLQ   PK+A    + L V    R  ++       G  L  
Sbjct: 354 ILLQPITPKMAEFCLNRLGVPKNERNLENSRFGSYSGGKLGA 395


>gi|157693210|ref|YP_001487672.1| valyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681968|gb|ABV63112.1| valine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 880

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 152/407 (37%), Gaps = 36/407 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             + D ++        L++E      E +  + G    +    V+      +F ++    
Sbjct: 314 YKEMDRFECRKQLVKDLQEEGILFKIEDHMHSVGHSERSGA-VVEPYLSTQWFVKMQPLA 372

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
           D+ ++      +     +R  +        ++D  +SR+   WG +I             
Sbjct: 373 DEAINLQNGDDQVQFVPDRFEKTYLHWMENIRDWCISRQ-LWWGHRIPAWYHKETKEVYV 431

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +    ++  W  +     +T G+ D       +++P +L V G DI+ F
Sbjct: 432 GLEAPEDIENWEQDNDVLDTWFSSALWPFSTMGWPDAESEDFKRYYPTNLLVTGYDIIFF 491

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +        +G K+SKSLGN IDP+EVI++ G D+LRYF
Sbjct: 492 WVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADSLRYF 551

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESD 387
           L    + G+D  +  + ++   N   AN I N  SR   M +           G  + +D
Sbjct: 552 LATGSSPGQDLRFSFEKVESTWN--FANKIWN-ASRFALMNMDGLTYDELDLIGEKSVAD 608

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+  +  ++ + +             + + + +   D Y +  K P  L   +    
Sbjct: 609 QWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAKLP--LYGEDEAAK 666

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            T   +   V+ Q   LL  F+P L  +I+  L    E+    +  +
Sbjct: 667 KTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITVAAWPE 713



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  KTKDPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     + +  D      T ++  +
Sbjct: 97  VEAKLREEGVSRYDLGREKFVEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLN 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVRQVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 882

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 160/414 (38%), Gaps = 43/414 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L+ +      E ++ + GQ Y      ++ +  + +F ++    
Sbjct: 310 YAGLDRYECREKVVEDLKKQGLLEKIEDHQHSVGQCYR-CDTVIEPLVSKQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ------ 225
           +  +   +      +P  R ++V       ++D  +SR+   WG  I +           
Sbjct: 369 EPAIRIVKEGKVRFVPE-RFSKVYLNWMENIQDWCISRQ-LWWGHRIPVWYCQDCGETIV 426

Query: 226 ---------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                                 ++  W  +     +T G+ D  +     F+P D+ V G
Sbjct: 427 SKEEEVKVCPGCGSENLKQDEDVLDTWFSSALWPFSTMGWPDRTE-DLDYFYPTDVLVTG 485

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +DI+ F    + + A       P              G K+SKSLGN IDP+EV+E+ G 
Sbjct: 486 RDIIFFWVARMIFMALEFMDEPPFKDVYIHGLIRDALGRKMSKSLGNGIDPLEVVEKYGA 545

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DALR+ L+     G D  + ++ L+   N   AN I N  +R + M   D D        
Sbjct: 546 DALRFMLITGNTPGNDMRFREERLEASRN--FANKIWN-AARFILMNTDDLDPSEIDEND 602

Query: 383 F--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              T +D+ +LS   +V++E+ +  +      A   +   +     D Y +  KP   + 
Sbjct: 603 LKLTLADKWMLSRLQKVIEEVDKAFEKYYFGEAAKVLYDFIWSEFCDWYIELIKPRLYQD 662

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQ 491
            +     T  Y  ++V+ ++  LL   +P +  +I+  L +++ E+    S  +
Sbjct: 663 KDVMEKRTAQYTGLKVLEKILRLLHPVMPFITEEIWQQLSISNGESIMISSWPE 716



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD          
Sbjct: 34  DRESFSIVMPPPNITGQLHLGHALDNTLQDILTRWKRMKGYNTLWLPGTDHASIATEVKV 93

Query: 63  QNAGVTT--------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            +                         + +  + +   R +    D S + F  T ++  
Sbjct: 94  VDKIRDEGLDKDSLGRDGFLKRAWEWKEEYGGRITSQLRKLGSSCDWSRERF--TMDEGC 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++  +G IY+G Y   +        +D EV  
Sbjct: 152 SRAVREVFVELYKRGLIYQGDYIVNWCPDCHTTLSDIEVEH 192


>gi|292669954|ref|ZP_06603380.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648425|gb|EFF66397.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 904

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/368 (22%), Positives = 144/368 (39%), Gaps = 39/368 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +  H  ++ +  + +F R+       ++         +P  R  ++       ++D  
Sbjct: 366 HCSRCHATIEPLVSKQWFVRMEDLAKPAIAAVRDGRIRFVPE-RFTKIYENWLENIRDWC 424

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 425 ISRQ-LWWGHRIPAWHCADCGETSVSREDLAACMHCGSSRIHQDEDVLDTWFSSALWPFE 483

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +     +  F+P    V G DI+ F    +         ++P             
Sbjct: 484 TLGWPEETKDLR-HFYPTSTLVTGYDIIFFWVARMVMMGLRFGGDVPFRDVFIHGLVRDS 542

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN I
Sbjct: 543 EGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--FANKI 600

Query: 359 GNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR + M L+  D    P     T +D  ILS  ++   ++  N++N  +  A   +
Sbjct: 601 WN-ASRYMLMNLEGTDDSFVPEESDCTLADRWILSRAAQTAHDVTANLENYELGEAGRMI 659

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K     K NP   +T LYV   V+ +   LL  F+P L  +I+ 
Sbjct: 660 YEFLWSEFCDWYIELTKARLYDKENPRARNTALYVLRTVLERTMRLLHPFMPFLTEEIWQ 719

Query: 476 ILFVADEN 483
            L  A E+
Sbjct: 720 KLPHAGES 727



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 55  ESRTPYSVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAK 114

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + +                      +  Q          +L  S  +D    T ++   
Sbjct: 115 VEESLRAEGTNRFELGREKFLERVWDWKQQYGDRIMYQLRMLGASCDWDRERFTMDEGCS 174

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++  + ++G IY+G     +        +D EV    +      
Sbjct: 175 RAVREVFVSLYEQGLIYQGTRITNWCPHCTTAISDIEVEHETEEGNLWH 223


>gi|304439719|ref|ZP_07399618.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371794|gb|EFM25401.1| valine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 896

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 89/413 (21%), Positives = 160/413 (38%), Gaps = 43/413 (10%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G   K           E  Y   E                ++ +  + +F ++       
Sbjct: 329 GLTIKEARKKIIEDFKELGYFSKEEKHDHAVGVCERCKTTIEPLISKQWFVKMEPLAKPA 388

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--------------------- 215
           L  Y+      +P  R  +V       ++D  +SR+ +                      
Sbjct: 389 LEAYKRGEVNFIPE-RFAKVYVNWLENIRDWCISRQLWWGHRLPVYYVEETGETIVSRTD 447

Query: 216 -------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                   G+ I  D    +  W  +     +T G+ D        F+P D+ + G DI+
Sbjct: 448 PSLDEKYKGLTIKHDED-TLDTWFSSALWPFSTLGWPDKTA-DLDYFFPTDVLITGYDII 505

Query: 269 RFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            F    + + +      +P    +F+      +G K+SKSLGN IDP+EVI++ G DALR
Sbjct: 506 FFWVSRMIFSSLEQMGEVPFKDVLFTGLVNDAQGRKMSKSLGNGIDPLEVIDKYGADALR 565

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTE 385
           + LV   + G D  +  + ++   N + AN + N  SR V M L+D D        AFT+
Sbjct: 566 FTLVTGNSPGNDMRFYYERVEA--NRNFANKLWN-ASRFVLMNLEDSDQEKVLVVNAFTQ 622

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
            D+ IL+     + E+  ++    I  A  ++   +     D Y +  KP  L   +   
Sbjct: 623 EDKWILTKLQETIDEVTTHLDKYEIGLAANEIYDFIWNEYCDWYIEMVKP-RLYGEDSPS 681

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRL 493
            +    V ++V++ +  LL  F+P +  +I+  L   ++      F  +D++L
Sbjct: 682 KTAAKEVLLKVLKDILKLLHPFMPFITEEIYSHLPGVEKAIIVEDFPVVDKKL 734



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 53/161 (32%), Gaps = 20/161 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I           H+GHA    + D+L R  R+ G   L+  GTD         
Sbjct: 49  KNKKPFTIMMPPPNVTGNLHMGHALNNTLQDILIRTKRMQGYSALWVPGTDHASISTEAK 108

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
                                     +  +   N ++    L +S D + R   T ++  
Sbjct: 109 VVEKMKKEGKTKEMIGREGFLEEAWDWTHKYGGNIKNQLKKLGVSCD-WTRDSFTLDEHL 167

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 ++ ++ +KG IY+G     +    +   +D EV  
Sbjct: 168 SKAVEEVFIRLYEKGLIYRGDRIINWCPSCKTAISDTEVEH 208


>gi|52081291|ref|YP_080082.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786670|ref|YP_092499.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647204|ref|ZP_08001426.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825234|sp|Q65GK8|SYV_BACLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52004502|gb|AAU24444.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349172|gb|AAU41806.1| ValS [Bacillus licheniformis ATCC 14580]
 gi|317390551|gb|EFV71356.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 880

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 154/410 (37%), Gaps = 36/410 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L++E      E +  + G    +    V+      +F ++    
Sbjct: 314 YKGMDRFECRKQIVKDLQEEGVLFKIEEHTHSVGHSERSGA-VVEPYLSTQWFVQMQPLA 372

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
           D  +   +S  +     +R  +        ++D  +SR+   WG +I             
Sbjct: 373 DAAIELQKSEGKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWWGHRIPAWYHKETGEIYV 431

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +  + ++  W  +     +T G+ D  +    +++P ++ V G DI+ F
Sbjct: 432 GVEAPEDAENWEQDKDVLDTWFSSALWPFSTMGWPDIDEEDFKRYYPTNVLVTGYDIIFF 491

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +        +G K+SKSLGN +DP++VI++ G D+LRYF
Sbjct: 492 WVSRMIFQGIEFTGERPFKDVLIHGLIRDDQGRKMSKSLGNGVDPMDVIDKYGADSLRYF 551

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G+D  +  + ++   N   AN I N  SR   M +           G  + +D
Sbjct: 552 LATGSSPGQDLRFSFEKVESTWN--FANKIWN-ASRFALMNMDGMTYEELDLSGEKSVAD 608

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+  +  ++ + +             + + + +   D Y +  K P  L   +    
Sbjct: 609 KWILTRLNETIETVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAKLP--LYGEDEAAK 666

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            T   +   V+ Q   LL  F+P L  +I+  L    E+       + +K
Sbjct: 667 KTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITVAKWPEAVK 716



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  EKEPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  Q-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                         K  + D     +  +   LD S + F  T ++  
Sbjct: 98  EAKLREEGKTRYDLGREKFLEETWNWKEEYADFIRSQWAKLGLGLDYSRERF--TLDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 156 SKAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|313893131|ref|ZP_07826708.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442484|gb|EFR60899.1| valine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 885

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 156/411 (37%), Gaps = 38/411 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +   E    +          + +  +  ++ M  + +F  +    + 
Sbjct: 315 NGLPREQARKQVVAELQELGLLEKIDDHDHAVGHCSRCNTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   + H    +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDHEVEFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+ D     K +++P  + V G DI
Sbjct: 433 EDITECPHCHGRVTQDPD-VLDTWFSSGLWPFATMGWPDQTPELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P++VI++ G DAL
Sbjct: 491 IFFWVARMIFMALEFEDEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIDQFGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTADDLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +Q +  N+    +  A + V   +     D Y +  KP    ++N   
Sbjct: 609 ADQWIIQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESNERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             TV Y+ V ++R +  LL  F+P +   I+  L    ++       + LK
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVAKWPEALK 719



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D + + F  T + 
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWTRERF--TLDD 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++ K+ +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVKLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 EEE 163
           +  
Sbjct: 213 DNR 215


>gi|256005887|ref|ZP_05430834.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990156|gb|EEU00291.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316940919|gb|ADU74953.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 884

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 150/380 (39%), Gaps = 40/380 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +          ++ +  + +F ++    +  +   ++     +P  R +++      
Sbjct: 340 HTHNVGTCYRCATVIEPLISKQWFVKMKPLAEPAIEVVKNGTIKFVPE-RFSKIYFNWME 398

Query: 203 GLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWID 233
            ++D  +SR+   WG +IP                              DP   +  W  
Sbjct: 399 NIQDWCISRQ-LWWGHRIPAYYCQECGYMMVENEMPDVCPKCGSSRIEQDPD-TLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  +  K  F+P D+ V G DI+ F    + + A   +   P      
Sbjct: 457 SALWPFSTLGWPDETEDLK-YFYPTDVLVTGYDIIFFWVARMIFSALEHTGKEPFKYVFI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G K+SKSLGN IDP+E+I++ G DALR+ L    + G D  + ++  +   N
Sbjct: 516 HGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +     + D     P  FT SD+ ILS  + + +E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVLMNFDDNLDFSKVDPNKFTTSDKWILSRVNNLTREVTENMEKFELG 633

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL ++   + E   D Y +  KP    K +  R     YV   V+     LL  ++P +
Sbjct: 634 IALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QYVLNYVLGTAMKLLHPYMPFI 692

Query: 470 ANKIFDILFVADENRCFQSL 489
             +I+  L V DE+      
Sbjct: 693 TEEIYRHLVVDDESIMISKW 712



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 35  KEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEAK 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              A                      +         +    L  S D      T ++   
Sbjct: 95  IVEAMAKEGITKEDIGREKFLERAWEWKRHYGGRIVEQLKKLGCSCDWQRERFTMDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                ++ ++  KG IY+G     +  +     +D EV       ++     PV+  +E
Sbjct: 155 RAVIEVFVRLYKKGLIYRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPVKDSDE 213


>gi|125972845|ref|YP_001036755.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125713070|gb|ABN51562.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 884

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 150/380 (39%), Gaps = 40/380 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +          ++ +  + +F ++    +  +   ++     +P  R +++      
Sbjct: 340 HTHNVGTCYRCATVIEPLISKQWFVKMKPLAEPAIEVVKNGTIKFVPE-RFSKIYFNWME 398

Query: 203 GLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWID 233
            ++D  +SR+   WG +IP                              DP   +  W  
Sbjct: 399 NIQDWCISRQ-LWWGHRIPAYYCQECGYMMVENEMPDVCPKCGSSRIEQDPD-TLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  +  K  F+P D+ V G DI+ F    + + A   +   P      
Sbjct: 457 SALWPFSTLGWPDETEDLK-YFYPTDVLVTGYDIIFFWVARMIFSALEHTGKEPFKYVFI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G K+SKSLGN IDP+E+I++ G DALR+ L    + G D  + ++  +   N
Sbjct: 516 HGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +     + D     P  FT SD+ ILS  + + +E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVLMNFDDNLDFSKVDPNKFTTSDKWILSRVNNLTREVTENMEKFELG 633

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL ++   + E   D Y +  KP    K +  R     YV   V+     LL  ++P +
Sbjct: 634 IALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QYVLNYVLGTAMKLLHPYMPFI 692

Query: 470 ANKIFDILFVADENRCFQSL 489
             +I+  L V DE+      
Sbjct: 693 TEEIYRHLVVDDESIMISKW 712



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 35  KEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEAK 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              A                      +         +    L  S D      T ++   
Sbjct: 95  IVEAMAKEGITKEDIGREKFLERAWEWKRHYGGRIVEQLKKLGCSCDWQRERFTMDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                ++ ++  KG I++G     +  +     +D EV       ++     PV+  +E
Sbjct: 155 RAVIEVFVRLYKKGLIHRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPVKDSDE 213


>gi|281417043|ref|ZP_06248063.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281408445|gb|EFB38703.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 875

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 150/380 (39%), Gaps = 40/380 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +          ++ +  + +F ++    +  +   ++     +P  R +++      
Sbjct: 331 HTHNVGTCYRCATVIEPLISKQWFVKMKPLAEPAIEVVKNGTIKFVPE-RFSKIYFNWME 389

Query: 203 GLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWID 233
            ++D  +SR+   WG +IP                              DP   +  W  
Sbjct: 390 NIQDWCISRQ-LWWGHRIPAYYCQECGYMMVENEMPDVCPKCGSSRIEQDPD-TLDTWFS 447

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  +  K  F+P D+ V G DI+ F    + + A   +   P      
Sbjct: 448 SALWPFSTLGWPDETEDLK-YFYPTDVLVTGYDIIFFWVARMIFSALEHTGKEPFKYVFI 506

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G K+SKSLGN IDP+E+I++ G DALR+ L    + G D  + ++  +   N
Sbjct: 507 HGIVRDALGRKMSKSLGNGIDPLEIIDKYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 566

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +     + D     P  FT SD+ ILS  + + +E+ ENM+   + 
Sbjct: 567 --FANKIWNASRFVLMNFDDNLDFSKVDPNKFTTSDKWILSRVNNLTREVTENMEKFELG 624

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL ++   + E   D Y +  KP    K +  R     YV   V+     LL  ++P +
Sbjct: 625 IALQKIYEFIWEEFCDWYIELVKPRLYDKDDETRLEA-QYVLNYVLGTAMKLLHPYMPFI 683

Query: 470 ANKIFDILFVADENRCFQSL 489
             +I+  L V DE+      
Sbjct: 684 TEEIYRHLVVDDESIMISKW 703



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 26  KEKTPFTIVIPPPNITGQLHMGHALDETLQDILIRWKRMQGYCTLWLPGTDHASIATEAK 85

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              A                      +         +    L  S D      T ++   
Sbjct: 86  IVEAMAKEGITKEDIGREKFLERAWEWKRHYGGRIVEQLKKLGCSCDWQRERFTMDEGLS 145

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                ++ ++  KG IY+G     +  +     +D EV       ++     PV+  +E
Sbjct: 146 RAVIEVFVRLYKKGLIYRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPVKDSDE 204


>gi|284047776|ref|YP_003398115.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283951997|gb|ADB46800.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 884

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 138/407 (33%), Gaps = 38/407 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+        L+D       E    + G      H+ V+ M    +F ++    
Sbjct: 315 YEGEDRYECRKHIVQDLKDMGLLVKIEDAPHSVGH-CQRCHHVVEPMVSTQWFVKMKPLA 373

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
           +  +          +P  R  +        + D  +SR+ +                   
Sbjct: 374 EAAIKCVTEGHTEFVPS-RFTKTYLQWMENIHDWCISRQIWWGHRIPVWYCDDCGEVAAS 432

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ D  +     ++P  + V G D
Sbjct: 433 RTDLTACPKCGSTHIHQEEDCLDTWFSSGLWPFSTFGWPDKTE-ELEHWYPTSVLVTGYD 491

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    +           P             +G K+SKSLGN IDP+EV+ + G D 
Sbjct: 492 IIFFWVARMITMGEEFMGKEPFKHVFIHGLVRDEQGRKMSKSLGNGIDPVEVVNQYGADT 551

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L+     G D  +  + ++   N   AN I N  SR   M L  YD         T
Sbjct: 552 LRFMLITGNTPGNDMRFYWNRIESTRN--FANKIWN-ASRFALMNLDGYD-KDAEKAPLT 607

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPD 442
            +D+ ILS     +Q++   ++   +  A   +   +     D Y +  KP    + N  
Sbjct: 608 LADKWILSRLQHTIQDVSTYLEKFELGEAGRLIYDFIWGEVCDWYIELAKPRLYDRENAP 667

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +T   V   V+     LL  ++P +  +I+  L    ++      
Sbjct: 668 ARATAQTVLCRVLGDAMKLLHPYMPFITEEIWQHLPHEGQSIMIAPW 714



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+   +         + H+GHA +  + D+L R+HR+ G +  +  G D  G      
Sbjct: 36  KSRKPFSVVIPPPNITGKLHMGHALDNTLQDILVRWHRMMGDNTCWLPGYDHAGLATQIK 95

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
                             +        + +            L IS  +D    T ++  
Sbjct: 96  VEEELKKKEGLTRYDLGREEFVKRVWKWKEAYGDEIVRQLKSLGISCDWDRQRFTMDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R  +  + +KG IYKG     + +      +D EV    D       + P+
Sbjct: 156 SRAVREAFVSLYEKGLIYKGTRMINWCVNCRTALSDVEVEHQDDAGALWHINYPI 210


>gi|152976875|ref|YP_001376392.1| valyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025627|gb|ABS23397.1| valyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 881

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWEQDNDVLDTWFSSALWPFSTLGWPNEDAKDFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VI++ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEDIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           V   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 VLAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVSAWPT 714



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEAKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVKKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|167630790|ref|YP_001681289.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167593530|gb|ABZ85278.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 894

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/418 (22%), Positives = 156/418 (37%), Gaps = 47/418 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  + +      +  A GQ Y      V+ M    +F R+    
Sbjct: 315 YVGQDRYECRKRIVKDLEAKGFLVKVNDHVHAVGQCYR-CDTVVEPMVSPQWFVRMKPLA 373

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY--- 226
           +  +   ++     +P  R  ++       ++D  +SR+   WG +I     DD  Y   
Sbjct: 374 EPAMEVVKNGRLKFVPE-RFTKIYLGWLENIRDWCISRQ-LWWGHRIPVWYCDDCDYIYC 431

Query: 227 -----------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
                                  ++  W  +     +T G+ +       K++P  + V 
Sbjct: 432 GRAEELPEVCPKCGASHFEQDPDVLDTWFSSGLWPFSTLGWPEKTP-ELVKYYPTSVLVT 490

Query: 264 GKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           G+DI+ F    + +       ++P  +       +  +G K+SKSLGN +DPIE+I++ G
Sbjct: 491 GRDIIFFWVARMVFMGLEFMGDVPFREVFIHGLILDAQGRKMSKSLGNGVDPIEIIDQYG 550

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR+ LV     G D  +  + L+   N   AN I N  SR V M L+ +    P  G
Sbjct: 551 ADTLRFMLVTGNTPGNDIRFHFERLEGIRN--FANKIWN-ASRFVLMNLEGFAIHQPW-G 606

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             T +D  ILS  +R++ E    ++   +  A   +   +     D Y +  KP    K 
Sbjct: 607 ELTLADRWILSRYNRLIGETTAALERYDLGEAARLLYEFLWNEYCDWYIELAKPRLYGKE 666

Query: 440 -----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                      T   V   V+R    LL  F+P L  +I+  L    E+       + 
Sbjct: 667 VGVADAAASRQTAQQVLTYVLRGTLQLLHPFMPFLTEEIWQQLPHHGESIMVAPWPEA 724



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 18/177 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA +  + D+L+RF R+ G  VL+  GTD  G       + 
Sbjct: 41  KAFSVVMPPPNVTGSLHLGHAMDNTLQDILSRFKRMQGYHVLWVPGTDHAGIATQAKVEE 100

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
           A                      +  Q           L  S D      T ++   +  
Sbjct: 101 ALAKEGLSKYDLGREAFLERVWDWKHQYGTRITTQLRTLGTSCDWTRERFTMDEGCSEAV 160

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           + ++ ++ +KG IY+G     +  + +   +D EV     G +      PVQ  + E
Sbjct: 161 QEVFIRLYEKGLIYRGNRIINWCPKCQTTISDIEVEHEERGGHLWHIRYPVQDGDGE 217


>gi|229105097|ref|ZP_04235748.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678278|gb|EEL32504.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 867

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       KF+  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAIDFKKFYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|240281239|gb|EER44742.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 325

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 117/276 (42%), Positives = 161/276 (58%), Gaps = 11/276 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 52  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 111

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN + F+++A   ++ YD FIRTT+  H +  R  W  ++ +G IY 
Sbjct: 112 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYT 171

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V        G            VQW  EE Y FRLSA+Q+ 
Sbjct: 172 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSAFQEP 231

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P+F+ P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 232 LLEHFRKNPDFVTPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 291

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           AL NY+T  GY   P       WPAD+ V+GKDILR
Sbjct: 292 ALVNYITYAGYPFPPGA--QSIWPADVQVVGKDILR 325


>gi|239827910|ref|YP_002950534.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808203|gb|ACS25268.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 880

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 146/378 (38%), Gaps = 38/378 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   ++  +     ER  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMKPLAEAAIQLQKTEGKVHFVPERFEKTYLHWLENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPFSTMGWPDTEAPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G D+LR+FL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  ++ + +  +          + + + +   D Y
Sbjct: 591 GGMTYDQLDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGEVGRVLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQHLPHEGESITV 708

Query: 487 QSLDQRLKPGFMLHKTFD 504
               + ++PG   H+  +
Sbjct: 709 AKWPE-VRPGLSNHEAAE 725



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  DKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRKQGLSRYDLGREKFLEETWKWKEEYASHIRQQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVIY 196


>gi|228902987|ref|ZP_04067127.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967560|ref|ZP_04128586.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792139|gb|EEM39715.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856663|gb|EEN01183.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/342 (22%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ D       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|229032112|ref|ZP_04188090.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729202|gb|EEL80200.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEE 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 423 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|225175195|ref|ZP_03729191.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169371|gb|EEG78169.1| valyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 881

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 147/379 (38%), Gaps = 46/379 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ +  + +F R+       +   ++     +P  R  +V       ++D  
Sbjct: 346 HCQRCSTVIEPLLSKQWFVRMKPLAKPAIERVKNGDIRFVPE-RFTKVYLNWVENIRDWC 404

Query: 209 LSRKTFDWGIKIP---------------------------DDPQYIMYVWIDALTNYLTT 241
           +SR+   WG +IP                                ++  W  +     +T
Sbjct: 405 ISRQ-IWWGHRIPAWYCDCGETIVSREEPQSCKQCGSSSLVQDDDVLDTWFSSALWPFST 463

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--- 298
            G+ D     K  F+P D+ V G DI+ F    W A ++   L   +++  H   +H   
Sbjct: 464 LGWPDETKDLK-HFYPTDVLVTGYDIIYF----WVARMIFMGLEFMEEIPFHTVYIHGLV 518

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN +DP+++I+E G D LR+ L+     G D  + ++ ++   N   A
Sbjct: 519 RDAQGRKMSKSLGNGVDPLQIIDEYGADTLRFTLITGQGPGNDQRFRQESVENSRN--FA 576

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N I N  SR V M L D+        +  T++D  IL   ++ ++E+   M    +  A 
Sbjct: 577 NKIWN-ASRFVLMNLDDFTVDQVDLSSGLTDADRWILHRYNKTVREVNRLMDAYELGEAA 635

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  K       +    + V  V   V+ +   LL  F+P +  +
Sbjct: 636 RTIYEFLWSDFCDWYIEMAKIPLYNAESEAEKNAVRSVLTYVLDRTLRLLHPFMPFITEE 695

Query: 473 IFDILFVADENRCFQSLDQ 491
           I+  L    E        +
Sbjct: 696 IWQKLPHEGETIVLALFPE 714



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I           H+GHA +  I D+L R  R+   D L+  GTD  G       
Sbjct: 36  DKEPFTIVIPPPNVTGTLHMGHALDNTIQDILIRRKRMQDFDTLWLPGTDHAGIATQIKV 95

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + ++           L +S D      T ++    
Sbjct: 96  EEHLAADGVSRYDLGREAFLDKVWDWKEEYHARIIRQLQKLGVSCDWSRERFTMDEGCSH 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G IY+G Y   +  R     +D EV  
Sbjct: 156 AVREVFVTLYERGLIYRGDYIINWCPRCLTALSDIEVEH 194


>gi|229098932|ref|ZP_04229867.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229117961|ref|ZP_04247321.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665410|gb|EEL20892.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684430|gb|EEL38373.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       KF+  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAVDFKKFYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|228960734|ref|ZP_04122373.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229129750|ref|ZP_04258717.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147028|ref|ZP_04275388.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180734|ref|ZP_04308072.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602712|gb|EEK60195.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636416|gb|EEK92886.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653666|gb|EEL09537.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798950|gb|EEM45925.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|229025922|ref|ZP_04182314.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735368|gb|EEL85971.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTDA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ D       +++  D  V G DI+ F    
Sbjct: 423 PADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|228917096|ref|ZP_04080654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935777|ref|ZP_04098589.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823834|gb|EEM69654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842514|gb|EEM87604.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 423 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|228941625|ref|ZP_04104172.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974554|ref|ZP_04135120.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981149|ref|ZP_04141449.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778349|gb|EEM26616.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784957|gb|EEM32970.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228817837|gb|EEM63915.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 881

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|75759956|ref|ZP_00740025.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218899626|ref|YP_002448037.1| valyl-tRNA synthetase [Bacillus cereus G9842]
 gi|74492553|gb|EAO55700.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218541207|gb|ACK93601.1| valyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 881

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/342 (22%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ D       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|303231399|ref|ZP_07318133.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513995|gb|EFL56003.1| valine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 885

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 150/410 (36%), Gaps = 38/410 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +  DE    +          + +     ++ M  + +F  +    + 
Sbjct: 315 NGMTREEARKQVVAELDELGLLEKIEDHDHAVGHCSRCKTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   +      +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDGEVQFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+  +    K +++P  + V G DI
Sbjct: 433 EDITECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPKDTAELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P++VI E G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTEADLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +  I  N+    +  A + V   +     D Y +  KP      N   
Sbjct: 609 ADKWIVEKYNETVASITANLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSDANERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             TV Y+ V ++R +  LL  F+P +   I+  L    E+       + L
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGESIVIAKWPEAL 718



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 23/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TDKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D   + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWGRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 E 161
           E
Sbjct: 213 E 213


>gi|238927599|ref|ZP_04659359.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884524|gb|EEQ48162.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 887

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/368 (22%), Positives = 144/368 (39%), Gaps = 39/368 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++ +  + +F R+ +     +          +P  R  ++       ++D  
Sbjct: 349 HCSRCRTTIEPLVSKQWFVRMESLAKPAIEAVRDGRIRFVPE-RFTKIYENWLENIRDWC 407

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 408 ISRQ-LWWGHRIPAWHCAHCGETSVSRDDLTACPHCGSTDLHQDEDVLDTWFSSALWPFE 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +     +  F+P  + V G DI+ F    +         ++P             
Sbjct: 467 TLGWPEQTVDLR-HFYPTSVLVTGYDIIFFWVARMVMMGLRFGGDVPFRDVFIHGLVRDS 525

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN I
Sbjct: 526 EGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--FANKI 583

Query: 359 GNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR + M L+  D    PT   +T +D  ILS      +++  N+++  +  A   +
Sbjct: 584 WN-ASRYMLMNLEGSDASFVPTAEDYTLADRWILSRAEETTRDVTANLEHYELGEAGRTI 642

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K     K N    +T LYV   V+ +   LL  F+P L  +I+ 
Sbjct: 643 YEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTMRLLHPFMPFLTEEIWQ 702

Query: 476 ILFVADEN 483
            L  A E+
Sbjct: 703 KLPHAGES 710



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 56/169 (33%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 38  ESRTPYSVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAK 97

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + A                      +  Q          +L  S  +D    T ++   
Sbjct: 98  VEAALREEGTTRFDLGREKFLTRVWDWKQQYGDRIMYQLRMLGASCDWDRERFTMDEGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++  + ++G IY+G     +        +D EV    +  +   
Sbjct: 158 RAVREVFVSLYEQGLIYQGTRITNWCPSCMTAISDIEVEHETEAGHLWH 206


>gi|228954741|ref|ZP_04116763.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229192669|ref|ZP_04319628.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590759|gb|EEK48619.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228804939|gb|EEM51536.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 867

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|269798312|ref|YP_003312212.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094941|gb|ACZ24932.1| valyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 885

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 155/411 (37%), Gaps = 38/411 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +   E    +          + +  +  ++ M  + +F  +    + 
Sbjct: 315 NGLPREEARKQVVAELKELGLLEKIDDHDHAVGHCSRCNTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   + H    +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDHEVEFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+       K +++P  + V G DI
Sbjct: 433 EDITECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPKQTPELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P+EVI++ G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTADDLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +Q +  N+    +  A + V   +     D Y +  KP    ++N   
Sbjct: 609 ADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESNERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             TV Y+ V ++R +  LL  F+P +   I+  L    ++       + LK
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVTKWPEALK 719



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D + + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWTRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 EEE 163
           +  
Sbjct: 213 DNR 215


>gi|229019683|ref|ZP_04176490.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229175140|ref|ZP_04302656.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608276|gb|EEK65582.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228741590|gb|EEL91783.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTDA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ D       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|313227339|emb|CBY22485.1| unnamed protein product [Oikopleura dioica]
          Length = 535

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/521 (18%), Positives = 197/521 (37%), Gaps = 52/521 (9%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNA---------GVTTKVFVDQNSRNFRDMADVLD 88
            + +  + L+  GTDE+G      A                K   D+     +++     
Sbjct: 1   MKNNRKNTLYICGTDEYGTATETKAYQDFKELYDKDVRQACKAVCDKYHALHKEVYQWFQ 60

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           IS D F RT+ +   D    ++  +  +G   +      +S + + +  D  V       
Sbjct: 61  ISTDHFGRTSTQHQDDVVHEIFNDLDKRGMWLEKDVDQLFSPKLDKFLADRFVEGTCPKP 120

Query: 149 YYNAQH-------------------NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-- 187
               +                    NP           R S +    L   ES  +    
Sbjct: 121 ECAYEDARGDQCDKCGGLLNAIDLVNPRCKFTGCTPEIRTSRHLFINLPKIESDLKLWLN 180

Query: 188 -----LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLT 240
                     +    S++K GL+   ++R    WG+K+P D     + YVW DA   Y +
Sbjct: 181 EVTSEWSNNAKQIFDSWIKKGLEPRCMTRD-LKWGVKVPKDGYDHKVFYVWFDAPIGYPS 239

Query: 241 TTGYLDNPDGSKAKFWPAD----LHVIGKDILRFHAIYWPAFLLSANLPL--PKKVFSHG 294
            T                        +GKD + FH++ +P++LL    P      + +  
Sbjct: 240 ITAEYTPKWRDWWLAKDGQEVKYYQFMGKDNVPFHSVLFPSYLLGTGKPWNLVNVINATE 299

Query: 295 FILHKGEKISKSLGNVIDPIEV-IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           ++ ++  K SKS G  +   +     +  D  R++L+      +D  +     + + N++
Sbjct: 300 YLNYENGKFSKSRGVGVFGNQASETNIPADVWRFYLIYMRPEVQDTEFQWTDFQMKNNSE 359

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L N +GN V+R +S ++K YDG +P+           ++  + +L++  E M+N      
Sbjct: 360 LLNNLGNFVNRGLSFVVKFYDGKVPSAEINGNMRAW-VAEVNELLKQYIECMENNHQREG 418

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKL 469
           L +V+++    ++     +PW   K+      + AS  + ++  ++  L+ LL+ F+P  
Sbjct: 419 LRRVLAISKLGNKLIQTWQPWVKVKSKDPALRNEASACVMLSANLVFLLSSLLEPFMPMT 478

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           + +I   + VA   +        L+    ++++  P+F + 
Sbjct: 479 SFEIARQVGVA-RAQIPAKFGAFLEKDHKIYESR-PLFRKI 517


>gi|304438334|ref|ZP_07398275.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368700|gb|EFM22384.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 887

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/368 (22%), Positives = 144/368 (39%), Gaps = 39/368 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++ +  + +F R+ +     +          +P  R  ++       ++D  
Sbjct: 349 HCSRCRTTIEPLVSKQWFVRMESLAKPAIEAVRDGRIRFVPE-RFTKIYENWLENIRDWC 407

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 408 ISRQ-LWWGHRIPAWHCAHCGETSVSRDDLTACPHCGSTDLHQDEDVLDTWFSSALWPFE 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +     +  F+P  + V G DI+ F    +         ++P             
Sbjct: 467 TLGWPEQTVDLR-HFYPTSVLVTGYDIIFFWVARMVMMGLRFGGDVPFRDVFIHGLVRDS 525

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN I
Sbjct: 526 EGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--FANKI 583

Query: 359 GNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR + M L+  D    PT   +T +D  ILS      +++  N+++  +  A   +
Sbjct: 584 WN-ASRYMLMNLEGSDASFVPTAEDYTLADRWILSRAEETTRDVTANLEHYELGEAGRTI 642

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K     K N    +T LYV   V+ +   LL  F+P L  +I+ 
Sbjct: 643 YEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTMRLLHPFMPFLTEEIWQ 702

Query: 476 ILFVADEN 483
            L  A E+
Sbjct: 703 KLPHAGES 710



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 38  ESRTPYSVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVVWIPGCDHAGIATQAK 97

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + A                      +  Q          +L  S  +D    T ++   
Sbjct: 98  VEAALREEGTTRFDLGREKFLTRVWDWKQQYGDRIMYQLRMLGASCDWDRERFTMDEGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R ++  + ++G IY+G     +        +D EV    +  +      P++  +
Sbjct: 158 RAVREVFVSLYEQGLIYQGTRITNWCPSCMTAISDIEVEHETEAGHLWHLRYPIEGTD 215


>gi|30022546|ref|NP_834177.1| valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048175|ref|ZP_04193744.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111929|ref|ZP_04241473.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504949|ref|YP_003666649.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433513|sp|Q817R6|SYV_BACCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29898104|gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228671493|gb|EEL26793.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723162|gb|EEL74538.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326001|gb|ADH08929.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|254757634|ref|ZP_05209661.1| valyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPREGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|229081723|ref|ZP_04214216.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701568|gb|EEL54061.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 867

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|30264526|ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529989|ref|YP_021338.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187350|ref|YP_030602.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321827|ref|ZP_00394786.1| COG0525: Valyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872012|ref|ZP_02216653.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640706|ref|ZP_02398966.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708361|ref|ZP_02898805.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653987|ref|ZP_02936028.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567025|ref|ZP_03019941.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218905660|ref|YP_002453494.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817238|ref|YP_002817247.1| valyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229093554|ref|ZP_04224656.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229600610|ref|YP_002868742.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724614|ref|ZP_05186397.1| valyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736562|ref|ZP_05194268.1| valyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754802|ref|ZP_05206837.1| valyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|81581271|sp|Q81LD3|SYV_BACAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30259184|gb|AAP28389.1| valine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505137|gb|AAT33813.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181277|gb|AAT56653.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712302|gb|EDR17838.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511278|gb|EDR86664.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126736|gb|EDS95619.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172081042|gb|EDT66120.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562016|gb|EDV15985.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218536093|gb|ACK88491.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227005238|gb|ACP14981.1| valine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228689884|gb|EEL43689.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229265018|gb|ACQ46655.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|196039248|ref|ZP_03106554.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029875|gb|EDX68476.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|206969837|ref|ZP_03230791.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218233729|ref|YP_002369265.1| valyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229071967|ref|ZP_04205177.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206735525|gb|EDZ52693.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218161686|gb|ACK61678.1| valine--tRNA ligase [Bacillus cereus B4264]
 gi|228711126|gb|EEL63091.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|311069301|ref|YP_003974224.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869818|gb|ADP33293.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 880

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 137/362 (37%), Gaps = 35/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +    D  ++  E   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVHMQPLADAAINLQEKEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGEVYVGLEAPKDSENWEQDNDVLDTWFSSALWPFSTMGWPDITAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDQYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  T +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKTVADKWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITVS 709

Query: 488 SL 489
           + 
Sbjct: 710 AW 711



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  ETKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     + +  D      T ++  +
Sbjct: 97  VEAKLREEGTSRYDLGREKFLEETWKWKEEYAEFIRSQWAKMGLGLDYSRERFTLDEGLN 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|196034490|ref|ZP_03101899.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228948172|ref|ZP_04110456.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993032|gb|EDX56991.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228811530|gb|EEM57867.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + +         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDNMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|138896204|ref|YP_001126657.1| valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196250160|ref|ZP_03148854.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267717|gb|ABO67912.1| Valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210344|gb|EDY05109.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 880

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 138/365 (37%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   ++  +     ER  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMKPLAEAAIKMQQTEGKVQFVPERFEKTYLHWLENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPFSTMGWPDTEAPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  +  + +             + + + +   D Y
Sbjct: 591 GGMTYEELDLSGEKTVADHWILTRLNETIDTVTKLADKYEFGEVGRTLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGDDETAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHDGESITV 708

Query: 487 QSLDQ 491
            S  Q
Sbjct: 709 ASWPQ 713



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  DKQPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRQQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|229123998|ref|ZP_04253190.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228659300|gb|EEL14948.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPREGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|301055965|ref|YP_003794176.1| valyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378134|gb|ADK07038.1| valyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVAFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|228987710|ref|ZP_04147821.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771984|gb|EEM20439.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 867

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|229198587|ref|ZP_04325289.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584869|gb|EEK42985.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 867

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|229141196|ref|ZP_04269735.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228642237|gb|EEK98529.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 867

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|228923211|ref|ZP_04086501.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836417|gb|EEM81768.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|308174506|ref|YP_003921211.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607370|emb|CBI43741.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554425|gb|AEB24917.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912829|gb|AEB64425.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 880

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 149/410 (36%), Gaps = 36/410 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++        L++       E +  + G    +    V+      +F ++    
Sbjct: 314 YNGMDRFECRKKLVKDLQETGVLFKIEDHMHSVGHSERSGA-VVEPYLSTQWFVKMQPLA 372

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
           D  +       +     +R  +        ++D  +SR+   WG +I             
Sbjct: 373 DAAVDLQSKEEKVHFVPDRFEKTYLHWMENIRDWCISRQ-LWWGHRIPAWYHKETKEVYV 431

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +    ++  W  +     +T G+ D       +++  D+ V G DI+ F
Sbjct: 432 GLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFKRYYSTDVLVTGYDIIFF 491

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +        +G K+SKSLGN +DP++VI++ G D+LRYF
Sbjct: 492 WVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRYF 551

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G+D  +  + ++   N   AN I N  SR   M +           G  + +D
Sbjct: 552 LATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMDGMTYDELDLSGEKSVAD 608

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+  +  ++++ +             + + + +   D Y +  K P  L   +    
Sbjct: 609 KWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWYIEMAKLP--LYGEDEAAK 666

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            T   V   V+ Q   LL  F+P L  +I+  L    E+    S    + 
Sbjct: 667 KTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITISSWPVPVP 716



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKQPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     + +  D      T ++  +
Sbjct: 97  VEAKLREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLN 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|154686944|ref|YP_001422105.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154352795|gb|ABS74874.1| ValS [Bacillus amyloliquefaciens FZB42]
          Length = 880

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 138/377 (36%), Gaps = 35/377 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D  +       +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADAAVDLQSKEEKVHFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETKEVYVGLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++  D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYSTDVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++++ +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKSVADKWILTRLNETIEDVTQLADRYEFGEVGRHLYNFIWDDVCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSVLAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITIS 709

Query: 488 SLDQRLKPGFMLHKTFD 504
           S    +          D
Sbjct: 710 SWPVPVPEHTDKEAAAD 726



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKQPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     + +  D      T ++  +
Sbjct: 97  VEAKLREQGTSRYDLGREKFLEETWKWKEEYADFIRSQWAKMGLGLDYSRERFTLDEGLN 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+  KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYKKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|118479624|ref|YP_896775.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044847|ref|ZP_03112081.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866439|ref|YP_002751817.1| valyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186699|ref|ZP_04313858.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118418849|gb|ABK87268.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024335|gb|EDX63008.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789413|gb|ACO29630.1| valine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596802|gb|EEK54463.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKFEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|229163414|ref|ZP_04291365.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619983|gb|EEK76858.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 867

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ D       +++  D  V G DI+ F    
Sbjct: 423 PADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|47566648|ref|ZP_00237470.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|229158076|ref|ZP_04286146.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|47556678|gb|EAL15010.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228625395|gb|EEK82152.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|326942237|gb|AEA18133.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 881

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 135/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  ++    +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSVLWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|303229381|ref|ZP_07316171.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515917|gb|EFL57869.1| valine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 885

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 150/410 (36%), Gaps = 38/410 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +  DE    +          + +     ++ M  + +F  +    + 
Sbjct: 315 NGMTREEARKQVVAELDELGLLEKIEDHDHAVGHCSRCKTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   +      +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDGEVQFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+  +    K +++P  + V G DI
Sbjct: 433 EDITECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPKDTAELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P++VI E G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLDVIGEYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTEADLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +  I  N+    +  A + V   +     D Y +  KP      N   
Sbjct: 609 ADKWIVEKYNETVASITANLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSDANERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             TV Y+ V ++R +  LL  F+P +   I+  L    E+       + L
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGESIVIAKWPEAL 718



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 23/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TDKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D S + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWKWKKEYGDTIVKQIRSLGASCDWSRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 E 161
           E
Sbjct: 213 E 213


>gi|229152660|ref|ZP_04280848.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630806|gb|EEK87447.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 867

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 424 VDIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|42783595|ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409029|sp|Q72ZW8|SYV_BACC1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42739524|gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 881

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|297529198|ref|YP_003670473.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252450|gb|ADI25896.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 880

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 139/365 (38%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    +  +   ++  +     ER  +        ++D  +SR+   W
Sbjct: 356 IEPYLSTQWFVKMKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDVESPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  +  + +  +      A   + + + +   D Y
Sbjct: 591 GGMTYEELDLSGEKTVADHWILTRLNETIDTVTKLAEKYEFGEAGRTLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITV 708

Query: 487 QSLDQ 491
               Q
Sbjct: 709 APWPQ 713



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  NKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRQQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVY 196


>gi|324328361|gb|ADY23621.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 881

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGMSRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|206975955|ref|ZP_03236865.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961947|ref|YP_002340517.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097904|ref|YP_002531961.1| valyl-tRNA synthetase [Bacillus cereus Q1]
 gi|206745707|gb|EDZ57104.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067118|gb|ACJ81368.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241962|gb|ACM14672.1| valyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 881

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|294792176|ref|ZP_06757324.1| valine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457406|gb|EFG25768.1| valine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 885

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 82/411 (19%), Positives = 155/411 (37%), Gaps = 38/411 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +   E    +          + +  +  ++ M  + +F  +    + 
Sbjct: 315 NGLPREEARKQVLAELKELGLLEKIDDHDHAVGHCSRCNTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   + H    +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDHEVEFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+       K +++P  + V G DI
Sbjct: 433 EDITECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPKQTPELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P+EVI++ G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTADDLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +Q +  N+    +  A + V   +     D Y +  KP    +++   
Sbjct: 609 ADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESDERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             TV Y+ V ++R +  LL  F+P +   I+  L    ++       + LK
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVTKWPKALK 719



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D + + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWTRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 EEE 163
           +  
Sbjct: 213 DNR 215


>gi|295399400|ref|ZP_06809382.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110041|ref|YP_003988357.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978866|gb|EFG54462.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215142|gb|ADP73746.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 880

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 140/365 (38%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   ++  +     ER  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMKPLAEAAIEMQKTEGKVHFVPERFEKTYLHWLENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPADIENWEQDPD-VLDTWFSSALWPFSTMGWPDTEAPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 QRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G D+LR+FL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADSLRFFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  ++ + +  +          + + + +   D Y
Sbjct: 591 GGMTYDQLDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGEVGRVLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   + +   T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGDDEEAKKTTRSVLAYVLDHTMRLLHPFMPFITEEIWQHLPHEGESITV 708

Query: 487 QSLDQ 491
               +
Sbjct: 709 AKWPE 713



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  DKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRKQGLSRYDLGREKFLEETWKWKEEYANHIRQQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVY 196


>gi|167037935|ref|YP_001665513.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040834|ref|YP_001663819.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914869|ref|ZP_07132185.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723897|ref|YP_003903648.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320116350|ref|YP_004186509.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855074|gb|ABY93483.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856769|gb|ABY95177.1| valyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889804|gb|EFK84950.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580958|gb|ADN54357.1| valyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319929441|gb|ADV80126.1| valyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 879

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 152/380 (40%), Gaps = 38/380 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +       V+ +  + +F ++       L   +      +P  R  ++ +    
Sbjct: 339 HVHNVGHCYRCDTVVEPLLSKQWFVKMEPLAKPALEVVKEGKIKFVPE-RFEKIYTNWLE 397

Query: 203 GLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDAL 235
            +KD  +SR+ +                             G       + ++  W  + 
Sbjct: 398 NIKDWCISRQLWWGHRIPAWYCDDCGHITVSRKDPQKCEACGSPHIHQDEDVLDTWFSSA 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +T G+ +  +     F+P D+ V G DI+ F    + + +      +P    +   
Sbjct: 458 LWPFSTMGWPEGTE-DLQYFYPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKHVLIHG 516

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN IDP+EVIEE G D LR+ LV   A G D  + +D ++  ++ +
Sbjct: 517 LVRDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNAPGNDMRFSQDKVE--LSRN 574

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++   +  A
Sbjct: 575 FANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNNIVKEVTENLEKFELGIA 632

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             ++   V     D Y +  KP  L   N +       V   V+     LL  F+P +  
Sbjct: 633 ATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPFMPFITE 691

Query: 472 KIFDILFVADENRCFQSLDQ 491
           +I+  L    E+       +
Sbjct: 692 EIWQNLPHEGESIMIAEWPK 711



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         Q H+GHA +  + D+L R+ R+ G   L+  G+D          
Sbjct: 34  EKQPFTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGYAALWIPGSDHASIATEIKV 93

Query: 62  ----AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                +  G+T K             + D+           L  S D     F  T ++ 
Sbjct: 94  LDTIREETGLTKKEIGREEFLKRAWAWKDKYENRILSQLKKLGSSCDWTRTRF--TMDEV 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++  + +KG IY+G     +        +D EV       +      P+
Sbjct: 152 CSRAVREVFVSLYEKGLIYRGDRIINWCPDCNTALSDAEVEHKEQKGHLWYIKYPI 207


>gi|56421173|ref|YP_148491.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819656|sp|Q5KWL3|SYV_GEOKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56381015|dbj|BAD76923.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 880

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/365 (20%), Positives = 139/365 (38%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   ++  +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMKPLAEAAIKLQQTDEKVQFVPDRFEKTYLHWLENIRDWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTESPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  ++ + +  +          + + + +   D Y
Sbjct: 591 GGMTYEELDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGEVGRTLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGADEAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITV 708

Query: 487 QSLDQ 491
               Q
Sbjct: 709 APWPQ 713



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  NKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRQQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVY 196


>gi|311031449|ref|ZP_07709539.1| valyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 882

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 134/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK +       +      R           ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADKAIDLQSEEDKVNFVPNRFENTYMRWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ +       
Sbjct: 415 GHRIPAWYNKETGEIHVDHNPPEDIENWEQDTDVLDTWFSSALWPFSTMGWPETESLDYQ 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTSTLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVIE+ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMEVIEKYGADSLRYFLSTGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D         G  + +D+ IL+  +  ++ + +  +          + + + +   D Y 
Sbjct: 592 DMKFEDIDLSGEKSVADKWILTRLNETIETVTKLAEKYEFGEVGRALYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+     LL  F+P +  +I+  L    E+    
Sbjct: 652 EMAKIP--LYSEDEAAKKTTRSILAYVLDNTMRLLHPFMPFITEEIWQQLPHEGESITTA 709

Query: 488 SLDQ 491
              +
Sbjct: 710 KWPE 713



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QDKTPYTIVIPPPNVTGRLHLGHAWDTTLQDIITRMKRMQGFDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     + D+ +++ R+    L +  D      T ++   
Sbjct: 97  VDEKLRNQGINRYDLGREKFMEEAWKWKDEYAKHIREQWSKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVNEVFVSLYKKGLIYRGEYIINWDPATKTALSDIEVIH 196


>gi|297616869|ref|YP_003702028.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144706|gb|ADI01463.1| valyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 884

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/412 (21%), Positives = 159/412 (38%), Gaps = 41/412 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  + +    E ++ A GQ Y      V+ +  + +F ++    
Sbjct: 313 YQGLDRYECRQRLVADLEQKGFLVKVEEHEHAVGQCYR-CETVVEPLVSKQWFVKMKPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +  +          +P  R  +V       ++D  +SR+   WG +IP            
Sbjct: 372 EPAIKAVVEGRIRFVPS-RFTKVYLNWMENIRDWCISRQ-LWWGHRIPVWYCQDCGQEIC 429

Query: 222 -----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                             DP  ++  W  +     +T G+          F+P D+ V G
Sbjct: 430 AKEEPQRCTNCGQSNLVQDPD-VLDTWFSSALWPFSTLGWPAPTS-DLEYFYPTDVLVTG 487

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +DI+ F    + +        +P    +     +   G K+SKSLGN IDPI+VI++ G 
Sbjct: 488 RDIIFFWVARMIFSGLEFMREVPFYDVLIHGLILDALGRKMSKSLGNGIDPIDVIDKYGA 547

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LR+ L+     G D  +  + ++   N   AN I N  +R V M L D++ +      
Sbjct: 548 DTLRFSLITGSTPGNDIRFHWEKVENTRN--FANKIWN-AARFVVMNLDDFEHITLEEKD 604

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           +T +D  ILS     ++++ E +Q+  +  A   +   V +   D Y +  KP   +  N
Sbjct: 605 YTLADRWILSRLQEKIEQVTELLQSYDLGEAARVLYDFVWDEFCDWYIELAKPRLYQNAN 664

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                 V  V   V+     LL  F+P +  +++  L    E+    S  Q+
Sbjct: 665 QRDKKVVQNVLHRVLADQMRLLHPFMPFVTEEVYQHLPRTAESIMVDSWPQK 716



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 22/179 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  +           H+GHA    + D+LAR+ R+ G + L+  GTD  G       
Sbjct: 37  SRPRFSMVIPPPNVTGSLHLGHALNNTLQDILARWRRMQGYNTLWLPGTDHAGIATQARV 96

Query: 63  QN--------------AGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    +V+  +N          + +    D S + F  T ++  
Sbjct: 97  EESLAQEGLSKYDLGRERFLERVWAWKNTYGDKIISQLKMLGCSCDWSRERF--TMDEGC 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            +  + ++ ++ +KG IY+G Y   +  + +   +D EV              P++  E
Sbjct: 155 SEAVKEVFVRLYEKGLIYRGDYIINWCPKCQTTISDIEVEHEDRSGNLWYIRYPIEGSE 213


>gi|294794041|ref|ZP_06759178.1| valine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455611|gb|EFG23983.1| valine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 885

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 154/411 (37%), Gaps = 38/411 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +   E    +          + +  +  ++ M  + +F  +    + 
Sbjct: 315 NGLPREEARKQVLAELKELGLLEKIDDHDHAVGHCSRCNTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   + H    +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDHEVEFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+       K +++P  + V G DI
Sbjct: 433 EDITECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPKQTPELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P+EVI++ G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTADDLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +Q +  N+    +  A + V   +     D Y +  KP    ++N   
Sbjct: 609 ADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESNERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             TV Y+ V ++R +  LL  F+P +   I+  L    ++         LK
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVTKWPGALK 719



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D + + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWNRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 EEE 163
           +  
Sbjct: 213 DNR 215


>gi|325290585|ref|YP_004266766.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965986|gb|ADY56765.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 892

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 141/372 (37%), Gaps = 42/372 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+ +    +F +++      +          +P  R   + +     ++D  +
Sbjct: 360 CYRCSTVVEPLVSRQWFVKMAPLAGPAMEVVRDGRLKFVPD-RFARIYTGWLENIRDWCI 418

Query: 210 SRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTNYLT 240
           SR+   WG +IP                              DP  ++  W  +     +
Sbjct: 419 SRQ-LWWGHRIPVWYCQDCGAEICVREDPAACPKCGGKNLEQDPD-VLDTWFSSALWPFS 476

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+  + +  K KF+P  + V G+DI+ F    + +        +P  + +     +  
Sbjct: 477 TMGWPKDAEDLK-KFYPTSVLVTGRDIIFFWVARMIFMGMEFMGEVPFHQVMIHGLILDA 535

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN +DP+EVI+  G D LR+ L+     G D  +  + L+   N    N I
Sbjct: 536 QGRKMSKSLGNGVDPLEVIDRYGADTLRFTLITGNTPGNDLRFHSEKLEASRN--FVNKI 593

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR V M L+D+       G  T +D+ ILS     ++ +   +    +  A   + 
Sbjct: 594 WN-ASRFVLMNLEDFAATP--GGELTLADKWILSRYDGTVKAVTTALDRFDLGEAARLLY 650

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     D Y +  K     + N +   T   +  EV+     LL  F+P L  +I+  
Sbjct: 651 EFIWNEFCDWYIELSKRRLYDRENSEGRHTAQRILREVLEGTMRLLHPFMPFLTEEIWQH 710

Query: 477 LFVADENRCFQS 488
           L V       Q 
Sbjct: 711 LNVPGRTIMLQD 722



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 22/174 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GHA +  + D+LAR+ R+ G D L+  GTD  G       
Sbjct: 49  NREAFSIVMPPPNVTGFLHLGHAMDSTLQDILARYKRMQGYDTLWLPGTDHAGIATQAKV 108

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                          + +  + ++  R +    D S + F  T +   
Sbjct: 109 EEKLAEEGTSRQELGREKFLERVWQWKEQYGGKITQQLRRLGASCDWSRERF--TMDAGC 166

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            +  R ++ K+ ++G IY+G Y   +  +     +D EV              P
Sbjct: 167 SEAVREVFVKLYEQGLIYRGNYIVNWCSKCHTTISDIEVEHVERDGNLWHIRYP 220


>gi|229087021|ref|ZP_04219175.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696284|gb|EEL49115.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 881

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 135/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +  D    +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNENDEDFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ +   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDRTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 38  EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHD 104
                           +        + ++ + + R+    +   + Y     T ++   D
Sbjct: 98  EGKLREEGISRYDLGREKFLEKAWEWKEEYASHIREQWGKVGLGLDYTRERFTLDEGLSD 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 158 AVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|296331646|ref|ZP_06874115.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675395|ref|YP_003867067.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151241|gb|EFG92121.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413639|gb|ADM38758.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 880

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 137/362 (37%), Gaps = 35/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+    D+ +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVRMQPLADEAIELQKKEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGELYVGLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDITAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHQGESITVS 709

Query: 488 SL 489
             
Sbjct: 710 QW 711



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +  D      T ++   
Sbjct: 97  VEAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|297544234|ref|YP_003676536.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842009|gb|ADH60525.1| valyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 879

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/381 (22%), Positives = 155/381 (40%), Gaps = 40/381 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +       V+ +  + +F ++       L   +      +P  R  ++ +    
Sbjct: 339 HVHNVGHCYRCDTVVEPLLSKQWFVKMEPLAKPALEVVKEGKIKFVPE-RFEKIYTNWLE 397

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            ++D  +SR+   WG +IP                               + ++  W  +
Sbjct: 398 NIRDWCISRQ-LWWGHRIPAWYCDDCGHITVSRKDPQKCEACGSSHIHQDEDVLDTWFSS 456

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +     K  F+P D+ V G DI+ F    + + +      +P    +  
Sbjct: 457 ALWPFSTMGWPEETQDLK-YFYPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKHVLIH 515

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G D  + +D ++  ++ 
Sbjct: 516 GLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQDKVE--LSR 573

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++   +  
Sbjct: 574 NFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNNIVKEVTENLEKFELGI 631

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   V     D Y +  KP  L   N +       V   V+     LL  F+P + 
Sbjct: 632 AATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPFMPFIT 690

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L    E+       +
Sbjct: 691 EEIWQNLPHEGESIMIAEWPK 711



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         Q H+GHA +  + D+L R+ R+ G   L+  G+D          
Sbjct: 34  EKQPFTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGYAALWIPGSDHASIATEVKV 93

Query: 62  ----AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                +  G+T K             + D+           L  S D     F  T ++ 
Sbjct: 94  LDTIREETGLTKKEIGREEFLKRAWAWKDKYENRILSQLKKLGSSCDWTRTRF--TMDEV 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++  + +KG IY+G     +        +D EV       +      P+
Sbjct: 152 CSRAVREVFVSLYEKGLIYRGDRIINWCPDCNTALSDAEVEHKEHKGHLWYIKYPI 207


>gi|228929504|ref|ZP_04092524.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830184|gb|EEM75801.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 867

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 423 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGHKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|167636213|ref|ZP_02394517.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688689|ref|ZP_02879894.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254687052|ref|ZP_05150910.1| valyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741600|ref|ZP_05199287.1| valyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528434|gb|EDR91202.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667375|gb|EDT18133.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 881

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKS GN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSFGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q  +LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMLLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|229006794|ref|ZP_04164427.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754416|gb|EEM03828.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 867

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 423 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAEDFKRYYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VI++ G DA+R+FL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEDIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEVAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 24  EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKV 83

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + ++ + + R     + +  D      T ++   D
Sbjct: 84  EGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSD 143

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 144 AVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|52141048|ref|YP_085781.1| valyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824177|sp|Q633Y6|SYV_BACCZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51974517|gb|AAU16067.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 881

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  +EE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 378 LQQKDEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 437

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    +
Sbjct: 438 ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSRM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP+EVIE+ G DA+R+FL    
Sbjct: 498 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIEKYGADAMRFFLSTGS 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 558 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 614

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 615 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 672

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 673 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|221310749|ref|ZP_03592596.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315074|ref|ZP_03596879.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319993|ref|ZP_03601287.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324275|ref|ZP_03605569.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767644|ref|NP_390687.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|251757438|sp|Q05873|SYV_BACSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|225185272|emb|CAB14769.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 137/367 (37%), Gaps = 35/367 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+    D  +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVRMQPLADAAIELQKKEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGELYVGLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHQGESITVS 709

Query: 488 SLDQRLK 494
                + 
Sbjct: 710 QWPAVVP 716



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +  D      T ++   
Sbjct: 97  VEAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|163942206|ref|YP_001647090.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864403|gb|ABY45462.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 881

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 133/343 (38%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
               +  +    ++  W  +     +T G+ +       KF+  D  V G DI+ F    
Sbjct: 437 PADFENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ +K  IY+G Y   +        +D EV  
Sbjct: 157 NAVNKVFVQLYEKDLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|238018913|ref|ZP_04599339.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748]
 gi|237864397|gb|EEP65687.1| hypothetical protein VEIDISOL_00773 [Veillonella dispar ATCC 17748]
          Length = 885

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 154/411 (37%), Gaps = 38/411 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +   E    +          + +  +  ++ M  + +F  +    + 
Sbjct: 315 NGMTREEARKQVVAELKELGLLEKIDDHDHAVGHCSRCNTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   + H    +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDHEVEFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDDCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+ +     K +++P  + V G DI
Sbjct: 433 EDINECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPEQTPELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P+EVI++ G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLEVIDQYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTADDLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+   +  +Q +  N+    +  A + V   +     D Y +  KP      N   
Sbjct: 609 ADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYNDGNERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             TV Y+ V ++R +  LL  F+P +   I+  L    ++       + LK
Sbjct: 669 RRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVTKWPEALK 719



 Score = 84.1 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D S + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWSRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 EEE 163
           E  
Sbjct: 213 ENR 215


>gi|49478642|ref|YP_038508.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394711|sp|Q6HD68|SYV_BACHK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49330198|gb|AAT60844.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 881

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKFEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILSYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T +K   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 157 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|289577959|ref|YP_003476586.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527672|gb|ADD02024.1| valyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 879

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 155/381 (40%), Gaps = 40/381 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +       V+ +  + +F ++       L   +      +P  R  ++ +    
Sbjct: 339 HVHNVGHCYRCDTVVEPLLSKQWFVKMEPLAKPALEVVKEGKIKFVPE-RFEKIYTNWLE 397

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            +KD  +SR+   WG +IP                               + ++  W  +
Sbjct: 398 NIKDWCISRQ-LWWGHRIPAWYCDDCGHITVSRKDPQKCEACGSTNIHQDEDVLDTWFSS 456

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +     K  F+P D+ V G DI+ F    + + +      +P    +  
Sbjct: 457 ALWPFSTMGWPEETQDLK-YFYPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKHVLIH 515

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVIEE G D LR+ LV   A G D  + +D ++  ++ 
Sbjct: 516 GLVRDAQGRKMSKSLGNGIDPLEVIEEYGADTLRFTLVIGNAPGNDMRFSQDKVE--LSR 573

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++   +  
Sbjct: 574 NFANKLWN-ASRYVLLNLTDNDTNLYTDG-LTIADKWILTRYNSIVKEVTENLEKFELGI 631

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   V     D Y +  KP  L   N +       V   V+     LL  F+P + 
Sbjct: 632 AATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPFMPFIT 690

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L    E+       +
Sbjct: 691 EEIWQNLPHEGESIMAAEWPK 711



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E++   I         Q H+GHA +  + D+L R+ R+ G   L+  G+D         
Sbjct: 33  SEKQPFTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGYSALWIPGSDHASIATEVK 92

Query: 62  -----AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
                 +  G+T K             + D+           L  S D     F  T ++
Sbjct: 93  VLDTIREETGLTKKEIGREEFLKRAWAWKDKYENRILSQLKKLGSSCDWTRTRF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 R ++  + +KG IY+G     +        +D EV       +      P+
Sbjct: 151 VCSRAVREVFVSLYEKGLIYRGDRIINWCPDCNTALSDAEVEHKEHKGHLWYIKYPI 207


>gi|228993197|ref|ZP_04153118.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999247|ref|ZP_04158827.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760444|gb|EEM09410.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766523|gb|EEM15165.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 881

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              I+  +    ++  W  +     +T G+ +       +++  D  V G DI+ F    
Sbjct: 437 PADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAEDFKRYYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VI++ G DA+R+FL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIDKYGADAMRFFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEDIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEVAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 38  EKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + ++ + + R     + +  D      T ++   D
Sbjct: 98  EGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSD 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 158 AVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|229062152|ref|ZP_04199476.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717135|gb|EEL68811.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 867

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              ++  +    ++  W  +     +T G+ +       KF+  D  V G DI+ F    
Sbjct: 423 PADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ +K  IY+G Y   +        +D EV  
Sbjct: 143 NAVNKVFVQLYEKDLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|282600751|ref|ZP_05979667.2| valine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571616|gb|EFB77151.1| valine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 926

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 149/383 (38%), Gaps = 39/383 (10%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            D       H+ ++ M  + +F ++       +   E      +P       I+++K G 
Sbjct: 389 HDVGTCYRCHSVIEPMVSKQWFVKMEPLAGPAIEAVEKGDIKFVPERFTKNYINWMKGG- 447

Query: 205 KDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWIDAL 235
           +D  +SR+   WG +IP                              DP   +  W  + 
Sbjct: 448 RDWCISRQ-LWWGHQIPAWYCDDCGETVVAKEAPSVCPKCGSTHLTQDPD-TLDTWFSSA 505

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +T G+ D        F+P +  V G DI+ F    + +     +   P    +   
Sbjct: 506 LWPFSTLGWPDENAPDYNYFYPTNTLVTGYDIIGFWVSRMIFSGLAYTGKAPFDTVLIHG 565

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN IDP+EVI++ G DALR  L+     G D  Y  + +    N  
Sbjct: 566 IVRDSQGRKMSKSLGNGIDPLEVIDQYGADALRMMLIVGSTAGNDMRYSDEKVTASRN-- 623

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            AN + N     +  + +D+   +P       SD+ +LS  ++V  E   N+    +  A
Sbjct: 624 FANKLWNAARFVLMNLPEDFQPGMPEESLLDMSDKWVLSELAKVTAEATANLDKYELGLA 683

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             +V + + E   D Y +  K   L   +  +A T   V V V+ +   LL  F+P +  
Sbjct: 684 AEKVENFIWEVYCDWYIEICKS-RLNSDDAVQADTARKVLVYVLDKALKLLHPFMPFITE 742

Query: 472 KIFDILFVADENRCFQSLDQRLK 494
           +I+  L  + E    ++    L+
Sbjct: 743 EIYQALPGSGETIMLETWPGNLE 765



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 23/182 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +    D+L R+ R+ G   L+  GTD         
Sbjct: 58  RSKKPFTIVMPPPNVTGQLHMGHAMDETWQDILTRYKRMQGYAALWVPGTDHASIATEAK 117

Query: 62  AQNAGVT--------------TKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKR 101
                                 + +  +N+         + +    D   + F  T ++ 
Sbjct: 118 VVAKMREEGLTKEMVGRDGFLERAWAWKNTYGNRIVSQLKKLGCSCDWQRERF--TMDEG 175

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPVQWM 160
             D  + ++ ++ +KG IY+G     +        +D EV     +G +++  +   +  
Sbjct: 176 CSDAVKEVFVRLYNKGLIYRGNRMVNWCPHCNTSISDAEVEYEAKEGSFWHLLYKVKETG 235

Query: 161 EE 162
           E 
Sbjct: 236 EM 237


>gi|239623672|ref|ZP_04666703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521703|gb|EEQ61569.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 880

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 153/381 (40%), Gaps = 38/381 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M ++ +F R+       +   ++     +P       + ++
Sbjct: 336 VPHSHNVGTHDRCKTTVEPMVKQQWFVRMEEMAKPAIEALKNGTLRFVPESFGKTYLHWL 395

Query: 201 KSGLKDLSLSRKTFDWGIKI----PDDPQYI------------------------MYVWI 232
           + G++D  +SR+   WG +I      D   I                        +  W 
Sbjct: 396 E-GIRDWCISRQ-LWWGHRIPAYYCQDCGKIVVSREEPHTCPQCGGASFKQDEDTLDTWF 453

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ ++ +     F+P D+ V G DI+ F    + +     +   P    +
Sbjct: 454 SSALWPFSTLGWPEHTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGIEQTGKTPFHTVL 512

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   
Sbjct: 513 IHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLITGNAPGNDMRFYWERVENSR 572

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N     +  I K  D    +  + T +D  ILS  + + +++ EN+    +
Sbjct: 573 N--FANKVWNASRFIMMNIGKAPDVTTVSLDSLTMADRWILSKVNTLTKDVTENLDKYEL 630

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             AL +V   + E   D Y +  KP    + +  +A+ +      V+ Q   LL  F+P 
Sbjct: 631 GIALQKVYDFIWEEFCDWYIEMVKPRLYNEDDTTKAAAIW-TLRTVLIQALKLLHPFMPF 689

Query: 469 LANKIFDILFVADENRCFQSL 489
           L  +IF  L   +E       
Sbjct: 690 LTEEIFCNLQEEEETIMVSQW 710



 Score = 76.4 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +                       + D+           L  S  +D    T ++   
Sbjct: 93  VIDKLKKEGIDKADLGRDGFLKECWKWRDEYGTRIVKQLHKLGSSADWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           D    ++ K+ +KG IYKG     +    +   +D EV       ++   + PV
Sbjct: 153 DAVLEVFVKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVEQDGFFWHINYPV 206


>gi|229013673|ref|ZP_04170802.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135303|ref|ZP_04264098.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648172|gb|EEL04212.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747595|gb|EEL97469.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 867

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 363 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 422

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              ++  +    ++  W  +     +T G+ +       KF+  D  V G DI+ F    
Sbjct: 423 PADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTDALVTGYDIIFFWVSR 482

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 483 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 542

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 543 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 599

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 600 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTR 657

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 658 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 700



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ +K  IY+G Y   +        +D EV  
Sbjct: 143 NAVNKVFVQLYEKDLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|228910293|ref|ZP_04074110.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849353|gb|EEM94190.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 867

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 12/342 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFD 215
           +Q  EEE   F    +++  L + E+  ++ +  +      I                  
Sbjct: 364 LQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEAP 423

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             I+  +    ++  W  +     +T G+ D       +++  D  V G DI+ F    +
Sbjct: 424 ADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRYYSTDALVTGYDIIFFWVSRM 483

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL    
Sbjct: 484 IFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTGS 543

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILS 392
           A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL+
Sbjct: 544 APGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWILT 600

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
             +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T   
Sbjct: 601 RLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEAAKKTTRS 658

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   V+ Q   LL  F+P +  KI+  L    ++    +   
Sbjct: 659 ILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGKSITVAAWPT 700



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 23  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 82

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 83  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 142

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D    ++ ++ +KG IY+G Y   +        +D EV  
Sbjct: 143 DAVNKVFVQLYEKGLIYRGEYIINWDPATRTALSDIEVIH 182


>gi|452309|emb|CAA54458.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 137/367 (37%), Gaps = 35/367 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+    D  +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVRMQPLADAAIELEKKEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGELYVGLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHQGESITVS 709

Query: 488 SLDQRLK 494
                + 
Sbjct: 710 QWPAVVP 716



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +  D      T ++   
Sbjct: 97  VEAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|291485223|dbj|BAI86298.1| valyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 880

 Score =  210 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 139/377 (36%), Gaps = 35/377 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+    D  +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVRMQPLADAAIELQKKEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGELYVGLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHQGESITVS 709

Query: 488 SLDQRLKPGFMLHKTFD 504
                +        T D
Sbjct: 710 QWPVVVPEHTDTEATAD 726



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +  D      T ++   
Sbjct: 97  VEAKLREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|325571587|ref|ZP_08147087.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156063|gb|EGC68259.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 943

 Score =  210 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 138/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 417 VEPRLSTQWFVKMEPLAKQAIDNQETDDAVDFYPPRFNQTFLRWMENVHDWVISRQ-LWW 475

Query: 217 GIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +I                          DP  ++  W  +     +T G+ D  +   
Sbjct: 476 GHQIPAWYHKETGEMYVGLEAPANAENWQQDPD-VLDTWFSSALWPFSTMGWPDENNEDF 534

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 535 QRYFPTNTLVTGYDIIAFWVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNG 594

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  + 
Sbjct: 595 IDPMEVIEQYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWNASRFVLMNVS 652

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +  +  I   G  + +D  IL+  +  ++++ +  +      A  Q+ + + +   D Y 
Sbjct: 653 EMTEEDIDFSGEKSVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYI 712

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   L   N         + V V+ Q+  LL   +P +  +I+  L    E+
Sbjct: 713 EMSK-ETLYGDNEAAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKLPHTGES 766



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 98  KEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAK 157

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    L +S D      T +    
Sbjct: 158 VEEKLREQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKLGLSLDYSRERFTLDDGLS 217

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 218 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 257


>gi|321312340|ref|YP_004204627.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018614|gb|ADV93600.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 880

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 136/362 (37%), Gaps = 35/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+    D  +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVRMQPLADAAIELQKKEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGELYVGLEAPEDSENWEQDTDVLDTWFSSALWPFSTMGWPDVTAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVESTWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GMTYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+ Q   LL  F+P L  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHQGESITVS 709

Query: 488 SL 489
             
Sbjct: 710 QW 711



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  QTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +  D      T ++   
Sbjct: 97  VEAKLREEGKPRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|257413958|ref|ZP_05591858.1| valine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201722|gb|EEV00007.1| valine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 651

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 86/414 (20%), Positives = 159/414 (38%), Gaps = 46/414 (11%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---------ADGQYYNAQHNPVQWMEEEGYFFRL 169
            Y G Y G           +D   +G          +   ++     V+ M ++ +F ++
Sbjct: 75  HYAGKYEGMDRYECRKALVEDLEKQGLLVKVEPHSHNVGTHDRCGTTVEPMVKQQWFVKM 134

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------- 215
                  +   ++    +LP  R  +        ++D  +SR+ +               
Sbjct: 135 DELIKPAVEAVKNGDIQLLPK-RMEKTYFNWTDNIRDWCISRQLWWGHRIPAYYCPDCGE 193

Query: 216 -------------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                         G    +     +  W  +     +T G+ D  +     F+P D+ V
Sbjct: 194 MVVAKAAPEKCPKCGCDHMEQDPDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTDVLV 252

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G DI+ F    + +  +      P    +F       +G K+SKSLGN IDP+EVI++ 
Sbjct: 253 TGYDIIFFWVIRMIFSGYEQMGKAPFHTVLFHGLVRDSQGRKMSKSLGNGIDPLEVIDKY 312

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR  L+   A G D  +  + ++   N   AN + N  SR + M L+  +   P+ 
Sbjct: 313 GADALRLTLITGNAPGNDMRFYWERVEASRN--FANKVWN-ASRFIMMNLEGSEIKEPSL 369

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
           G    +D+ ILS  + + +++ ENM    +  A+ +V   + +   D Y +  K     K
Sbjct: 370 GELKPADKWILSKVNTLAKDVTENMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNK 429

Query: 439 T-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +P  A+   +    V+ +   LL  F+P +  +IF  L   ++        +
Sbjct: 430 ENDPASANAAFWTLKTVLTEALKLLHPFMPFITEEIFCTLHPEEDTIMLAKWPE 483


>gi|254478609|ref|ZP_05091982.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214035463|gb|EEB76164.1| valyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 879

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 88/410 (21%), Positives = 161/410 (39%), Gaps = 41/410 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+        L ++      E +    G  Y      V+ +  E +F ++    
Sbjct: 311 YEGLDRYEAREKIVKDLEEQGLLLKVEEHVHNVGHCYR-CDTVVEPLLSEQWFVKMEPLA 369

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              L   +      +P  R  ++ +     +KD  +SR+   WG +IP            
Sbjct: 370 KPALQVVKEGKIKFVPE-RFEKIYTNWLENIKDWCISRQ-LWWGHRIPAWYCEDCGHVTV 427

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              + ++  W  +     +T G+ +  +  K  F+P D+ V G 
Sbjct: 428 SREDPVKCEACGSTNIHQDENVLDTWFSSALWPFSTMGWPEETEDLK-YFYPTDVLVTGY 486

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + + +      +P    +         G K+SKSLGN IDP+EVIE+ G D
Sbjct: 487 DIIFFWVARMIFMSLEFMKEIPFKYVLIHGLVRDALGRKMSKSLGNGIDPLEVIEKYGAD 546

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR+ LV   A G D  +  + ++   + + AN + N  SR V + L + D  +      
Sbjct: 547 TLRFTLVIGNAPGNDMRFSWEKVE--HSRNFANKLWN-ASRYVLLNLDENDTNLYI-DNL 602

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T +D+ IL+  + +++E+ +N++   +  A +++   V     D Y +  KP  L   N 
Sbjct: 603 TLADKWILTRYNNIVKEVTDNLEKFELGVAASKLYDFVWSEFCDWYIELSKP-VLYSDNE 661

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +       V   V+     LL  F+P +  +I+  L    E+       +
Sbjct: 662 EAKKVTKSVLRYVLDNTLRLLHPFMPFITEEIWQNLPHEGESIMVAEWPK 711



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 19/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           ++   I         + H+GHA +  + D+L R+ R+ G   L+  GTD           
Sbjct: 35  KKPFTIVIPPPNVTGELHMGHALDNTLQDILIRWRRMQGYAALWIPGTDHASIATEIKVL 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + D+           L  S D      T +++   
Sbjct: 95  DKIREETGKTKKDLTREEFLEKAWEWKDKYENRILSQLKKLGSSCDWTRTAFTMDEKRSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             R ++  + +KG IYKG     +        +D EV       +      PV+  E
Sbjct: 155 AVREVFVSLYEKGLIYKGNRIINWCPSCNTALSDAEVEHKEHKGHLWYIKYPVKGEE 211


>gi|229829588|ref|ZP_04455657.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM
           14600]
 gi|229791577|gb|EEP27691.1| hypothetical protein GCWU000342_01685 [Shuttleworthia satelles DSM
           14600]
          Length = 888

 Score =  209 bits (532), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 144/374 (38%), Gaps = 40/374 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           ++  H  V+ M +  +F R+     + L  +       +P     +        +KD  +
Sbjct: 347 HDRCHTTVEPMIKPQWFVRMKEMGKEALDSFHRGEMRFVPENY-GKTYEHWLENIKDWCI 405

Query: 210 SRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYLT 240
           SR+   WG +I                                 +  +  W  +      
Sbjct: 406 SRQ-LWWGHRIPAYYCQDCGRIVVRRGGAPEICPQCKGRHFVQDEDTLDTWFSSALWPFA 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+          F+P D+ V G DI+ F    + + A   +   P    +        
Sbjct: 465 TLGWPKETP-ELDYFYPTDVLVTGYDIIFFWVIRMMFSALEQTGKAPFHHVLIHGLVRDD 523

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+E+I+  G DALR  L+   A G D  +  + ++   N   AN +
Sbjct: 524 QGRKMSKSLGNGIDPLEIIDRYGADALRLTLITGNAPGNDMRFYIERVENSRN--FANKV 581

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR + M L       P        D  I S  + V++E+ +NM+   +  A+ +V 
Sbjct: 582 WN-ASRFILMNLDGVSLHEPASSELKIEDRWIKSRLNTVVKELTDNMERYELGIAVQKVF 640

Query: 419 SLVSE--VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + +   D Y +  KP    K  +PD A+  LY    V+ +   LL  F+P +  +I+ 
Sbjct: 641 DFIWDEFCDWYIEIVKPRMYHKEQDPDSANAALYTLKGVLAEALKLLHPFMPFITEEIYC 700

Query: 476 ILFVADENRCFQSL 489
            L   +++      
Sbjct: 701 SLRPEEKSIMIADW 714



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA +  + D+L R+ R+ G + L+  G D         
Sbjct: 34  RDKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRYKRMQGYEALWQPGMDHAAIATEVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             NA                      + ++  R   +    L  S  ++    T ++   
Sbjct: 94  VTNALKGKGIDKLAIGREKFLEYCWDWREEYGRAIINQLKKLGSSADWERERFTMDRGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +    ++ ++ +KG IY+G     +    +   +D EV        +     P++  E
Sbjct: 154 EAVEEVFCRLYEKGYIYRGSRIINWCPSCQTSLSDAEVEHEEQEGSFWHIKYPIEGEE 211


>gi|326390738|ref|ZP_08212292.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993275|gb|EGD51713.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 879

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 157/381 (41%), Gaps = 40/381 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +       V+ +  + +F ++       L   +      +P  R  ++      
Sbjct: 339 HVHNVGHCYRCDTVVEPLLSKQWFVKMEPLAKPALEVVKEGKIKFVPE-RFEKIYINWLE 397

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDA 234
            +KD  +SR+   WG +IP               DP+               ++  W  +
Sbjct: 398 NIKDWCISRQ-LWWGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFSS 456

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +  +  F+P D+ V G DI+ F    + + +      +P    +  
Sbjct: 457 ALWPFSTMGWPEETEDLR-YFYPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKHVLIH 515

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G D  + +D ++  ++ 
Sbjct: 516 GLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQDKVE--LSR 573

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++   +  
Sbjct: 574 NFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEKFELGI 631

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   V     D Y +  KP  L   N +       V   V+     LL  F+P + 
Sbjct: 632 AATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPFMPFIT 690

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L    E+       +
Sbjct: 691 EEIWQNLPHEGESIMIAEWPK 711



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         Q H+GHA +  + D+L R+ R+ G  VL+  G+D          
Sbjct: 34  EKQPFTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGYAVLWIPGSDHASIATEIKV 93

Query: 62  ----AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                +  G+T K             + D+           L  S D     F  T ++ 
Sbjct: 94  LDTIREETGLTKKEIGREEFLKRAWAWKDKYENRILSQLKKLGSSCDWTRTRF--TMDEV 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++  + +KG IY+G     +        +D EV       +      P+
Sbjct: 152 CSRAVREVFVSLYEKGLIYRGDRIINWCPDCNTALSDAEVEHKEQKGHLWYIKYPI 207


>gi|256751768|ref|ZP_05492641.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749296|gb|EEU62327.1| valyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 879

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 40/381 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +       V+ +  + +F ++       L   +      +P  R  ++ +    
Sbjct: 339 HVHNVGHCYRCDTVVEPLLSKQWFVKMEPLAKPALEVVKEGKIKFVPE-RFEKIYTNWLE 397

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            +KD  +SR+   WG +IP                               + ++  W  +
Sbjct: 398 NIKDWCISRQ-LWWGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFSS 456

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +  +  F+P D+ V G DI+ F    + + +      +P    +  
Sbjct: 457 ALWPFSTMGWPEETEDLR-YFYPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKHVLIH 515

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G D  + +D ++  ++ 
Sbjct: 516 GLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQDKVE--LSR 573

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++   +  
Sbjct: 574 NFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEKFELGI 631

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   V     D Y +  KP  L   N +       V   V+     LL  F+P + 
Sbjct: 632 AATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPFMPFIT 690

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L    E+       +
Sbjct: 691 EEIWQNLPHEGESIMIAEWPK 711



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 23/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         Q H+GHA +  + D+L R+ R+ G   L+  G+D          
Sbjct: 34  EKQPFTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGYAALWIPGSDHASIATEIKV 93

Query: 62  ----AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                +  G+T K             + D+           L  S D     F  T ++ 
Sbjct: 94  LDTIREETGLTKKEIGREEFLKRAWAWKDKYENRILSQLKKLGSSCDWTRTRF--TMDEV 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R ++  + +KG IY+G     +        +D EV       +      P++  E
Sbjct: 152 CSRAVREVFVSLYEKGLIYRGDRIINWCPDCNTALSDAEVEHKEHKGHLWYIKYPIKGEE 211


>gi|296134048|ref|YP_003641295.1| valyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032626|gb|ADG83394.1| valyl-tRNA synthetase [Thermincola potens JR]
          Length = 883

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 88/412 (21%), Positives = 159/412 (38%), Gaps = 42/412 (10%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           I    D Y+        L    +    E +  + G  Y      ++ +  + +F ++   
Sbjct: 312 IYRGLDRYECRKRIVEDLEKGGFLVKVEDHTHSVGHCYR-CGTVIEPLVSKQWFVKMKPL 370

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------- 221
            +  +   +      +P  R  ++       ++D  +SR+   WG +IP           
Sbjct: 371 AEPAIQAAKEERVRFIPE-RFTKIYLNWMENIRDWCISRQ-LWWGHRIPVWYCQDCGEVI 428

Query: 222 ------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
                              DP  ++  W  +     +T G+ +        F+P  + V 
Sbjct: 429 CELDPPEKCPKCGSARLEQDPD-VLDTWFSSGLWPFSTLGWPERKP-ELEYFYPTSVLVT 486

Query: 264 GKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           G+DI+ F    + + A      +P  +       +  +G K+SKSLGN +DPIEVIE+ G
Sbjct: 487 GRDIIFFWVARMIFMAMEFMKEVPFREVFIHGLVLDAQGRKMSKSLGNGVDPIEVIEKYG 546

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR+ L+     G D  +  + L    N   AN I N  SR V M L+D+    P P 
Sbjct: 547 ADTLRFMLITGNTPGNDLRFHFERLDNTRN--FANKIWN-ASRFVLMNLEDFKPGEP-PK 602

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT 439
            ++ +D+ I S  ++ ++ + + ++   +  A   +   +     D Y +  KP    K 
Sbjct: 603 DYSPADKWIKSRFNKTVKTVTDALEAYNLGEAAQSLYEFIWNEFCDWYIELVKPVLYGKE 662

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +P    T  YV   V+     LL  F+P +  +I+  L    +    Q   +
Sbjct: 663 SPAARYTAQYVLWSVLEGTMRLLHPFMPFITEEIWQHLPHEGKTIMTQQWPE 714



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++   I           H+GHA +  + D+L R+ R+ G + L+  GTD  G       
Sbjct: 37  EKKPFAIVMPPPNVTGALHMGHAIDNTLQDILTRWRRMQGYNALWLPGTDHAGIATQAKV 96

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + +            L  S D      T ++    
Sbjct: 97  EEQLAKEGLSKYDLGRDKFLERVWQWKEFYHNRIATQLRSLGSSCDWERERFTMDEGCSR 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             + ++  +  KG IY+  Y   +        +D EV       ++     PV+  +E
Sbjct: 157 AVQKVFVDLYKKGLIYRDNYIINWCTNCRTTISDIEVEHTDQAGHFWHIRYPVKDSDE 214


>gi|320530417|ref|ZP_08031475.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137250|gb|EFW29174.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 887

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 143/374 (38%), Gaps = 39/374 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++ +  + +F R+    +  ++         +P  R  ++       ++D  
Sbjct: 349 HCSRCGTTIEPLVSKQWFVRMEELAEPAIAAVRDGRIRFVPD-RFTKIYENWLENIRDWC 407

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 408 ISRQ-LWWGHRIPAWHCDDCGETSVSREDLTACAHCGSTKIRQDEDVLDTWFSSGLWPFE 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ D+    +  F+P    V G DI+ F    +         ++P             
Sbjct: 467 TMGWPDDTKDLR-HFYPTAALVTGYDIIFFWVARMVMMGLRFGGDVPFRDVFIHGLVRDS 525

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN I
Sbjct: 526 EGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--FANKI 583

Query: 359 GNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR + M  +  D    P    +T +D  ILS C+   +++  N++   +  A   +
Sbjct: 584 WN-ASRYMLMNFEGADTSFVPAAEDYTLADRWILSRCAVTARDVTANLEKYELGEAGRTI 642

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K     K N    +T LYV   V+ +   LL  F+P L  +I+ 
Sbjct: 643 YEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTLRLLHPFMPFLTEEIWQ 702

Query: 476 ILFVADENRCFQSL 489
            L    E+      
Sbjct: 703 KLPHEGESIMTAHW 716



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + RE   +         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 38  ESREPYSVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVIWVPGCDHAGIATQAK 97

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            + +                      + +Q          +L  S D      T +    
Sbjct: 98  VEESLRAEGTTRFDLGREKFLERVWAWKEQYGDRIMYQLRMLGSSCDWARERFTMDGGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R  +  + ++G IY+G     +        +D EV    +  +       ++  +E
Sbjct: 158 RAVREAFVSLYEQGLIYQGTRITNWCPSCTTAISDIEVNHETEEGHLWHLRYAIEGTDE 216


>gi|225376843|ref|ZP_03754064.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM
           16841]
 gi|225211339|gb|EEG93693.1| hypothetical protein ROSEINA2194_02485 [Roseburia inulinivorans DSM
           16841]
          Length = 891

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/383 (21%), Positives = 148/383 (38%), Gaps = 14/383 (3%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G   +   +    ++ + +   DE+ K A     N +   +     E  +F  +   
Sbjct: 351 HNVGTHDRCGTTVEPMIKQQWFVKMDEMIKPAVEGVKNGEIQLL-PKRMEKTYFNWTDNI 409

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                  +      +P    +E    V +         K    G          +  W  
Sbjct: 410 RDWCISRQLWWGHRIPAYYCDECGEMVVAK----EAPHKCPKCGCTHMTQDPDTLDTWFS 465

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +  +      P    +F
Sbjct: 466 SALWPFSTLGWPEKTE-DLDYFYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF 524

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 525 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN 584

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  SR + M L+  +   P       +D+ ILS  + + +++ ENM    + 
Sbjct: 585 --FANKVWN-ASRFIMMNLEGAEIKTPALDELKAADKWILSRVNTLAKDVTENMDKFEMG 641

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A+ +V   + +   D Y +  K     K  +P  A+   +    V+ +   LL  F+P 
Sbjct: 642 IAVQKVYDFIWDEFCDWYIEITKVRTYNKENDPASANAAFWTLKTVLTEALKLLHPFMPF 701

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +  +IF  L   ++        +
Sbjct: 702 ITEEIFCTLHPEEDTIMLAKWPE 724



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 43  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEVK 102

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              +                      + ++      +    +  S D      T +K   
Sbjct: 103 VIQSLKEKGIDKADLGREGFLEKCWEWREEYGNRIINQLKKMGSSADWQRERFTMDKGCS 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           D  + ++ K+ +KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 163 DAVQEVFIKLYEKGYIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 220


>gi|307265322|ref|ZP_07546879.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919606|gb|EFN49823.1| valyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 879

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/381 (22%), Positives = 155/381 (40%), Gaps = 40/381 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +       V+ +  + +F ++       L   +      +P  R  ++      
Sbjct: 339 HVHNVGHCYRCDTVVEPLLSKQWFVKMEPLAKPALEVVKEGKIKFVPE-RFEKIYINWLE 397

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            +KD  +SR+   WG +IP                               + ++  W  +
Sbjct: 398 NIKDWCISRQ-LWWGHRIPAWYCDDCGHITVSRKDPEKCEACGSTNIHQDEDVLDTWFSS 456

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +  +  F+P D+ V G DI+ F    + + +      +P    +  
Sbjct: 457 ALWPFSTMGWPEETEDLR-YFYPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKHVLIH 515

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVIE+ G D LR+ LV   A G D  + +D ++  ++ 
Sbjct: 516 GLVRDAQGRKMSKSLGNGIDPLEVIEKYGADTLRFTLVIGNAPGNDMRFSQDKVE--LSR 573

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           + AN + N  SR V + L D D  + T G  T +D+ IL+  + +++E+ EN++   +  
Sbjct: 574 NFANKLWN-ASRYVLLNLTDNDTNLYTEG-LTIADKWILTRYNNIVKEVTENLEKFELGI 631

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   V     D Y +  KP  L   N +       V   V+     LL  F+P + 
Sbjct: 632 AATKLYDFVWSEFCDWYIELSKP-VLYSDNLEAKKVTKSVLRYVLDNTLRLLHPFMPFIT 690

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L    E+       +
Sbjct: 691 EEIWQNLPHEGESIMIAEWPK 711



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         Q H+GHA +  + D+L R+ R+ G   L+  G+D          
Sbjct: 34  EKQPFTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGYAALWIPGSDHASIATEIKV 93

Query: 62  ----AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                +  G T K             + D+           L  S D     F  T ++ 
Sbjct: 94  LDTIREETGFTKKEIGREEFLKRAWAWKDKYENRILSQLKKLGSSCDWTRTRF--TMDEV 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++  + +KG IY+G     +        +D EV       +      P+
Sbjct: 152 CSRAVREVFVSLYEKGLIYRGDRIINWCPDCNTALSDAEVEHKEQKGHLWYIKYPI 207


>gi|153852712|ref|ZP_01994149.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
 gi|149754354|gb|EDM64285.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
          Length = 886

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 94/490 (19%), Positives = 185/490 (37%), Gaps = 49/490 (10%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY 91
           D++ +  +L   D       D +  K         +T     +      R     ++I  
Sbjct: 241 DIVGKMCKLPLTDREIPIVADYYVDK-EFGTGAVKITPAHDPNDFEVGKRHNLPEINIMN 299

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           DD           T    +       D Y+   +    L ++ Y     V    +   ++
Sbjct: 300 DD----------ATINEQYGGKYAGMDRYEARKAMVADLEEQGYLV-KVVPHSHNVGTHD 348

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
             H  V+ M ++ +F ++       +   ++     +P  R N++       ++D  +SR
Sbjct: 349 RCHTTVEPMIKQQWFVKMEELAKPAIEAIKNGDLRFVPE-RFNKIYLHWLENIRDWCISR 407

Query: 212 KTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           + +                             G       +  +  W  +     +T G+
Sbjct: 408 QIWWGHRIPAYYCDECGEVVVGHGAPEKCPKCGCTHFTQDEDTLDTWFSSALWPFSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            D  +     F+P D+ V G DI+ F    + +  +  +   P             +G K
Sbjct: 468 PDQTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYAHTGKAPFHTVFIHGLVRDSQGRK 526

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN IDP+E+I++ G DALR  L+   A G D  +  + ++   N   AN + N  
Sbjct: 527 MSKSLGNGIDPLEIIDQYGADALRMTLMTGNAPGNDMRFYNERVEASRN--FANKVWN-A 583

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR + M L + +   P       +D  I+S C+ +++++ ENM    +  AL+++   + 
Sbjct: 584 SRFIMMNLDEKELKKPANFEKRPADCWIMSKCNSLVKDVTENMDKFELGIALSKIYDFMW 643

Query: 423 E--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   D Y +  K P      + + A+  L+   EV+++   LL  ++P +  +I+  L  
Sbjct: 644 DEFCDWYIEMAKYPIYHADEDQEAANAALWTLREVLKKSLKLLHPYMPFVTEEIYSKLVP 703

Query: 480 ADENRCFQSL 489
            +E+      
Sbjct: 704 EEESLMMSDW 713



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +         L +S  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKELGREKFLERTWQWKEEYAGTIEGQLKKLGVSCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ K+ ++G IYKG     +    +   +D EV       ++     P+
Sbjct: 153 SKAVEEVFIKLYNEGYIYKGSRIINWCPVCKTSLSDAEVEHEEQDGFFWHIKYPI 207


>gi|291536702|emb|CBL09814.1| valyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 887

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/414 (20%), Positives = 158/414 (38%), Gaps = 46/414 (11%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---------ADGQYYNAQHNPVQWMEEEGYFFRL 169
            Y G Y G           +D   +G          +   ++     V+ M ++ +F R+
Sbjct: 311 HYAGKYEGMDRYECRKALVEDLEKQGLLVKVEPHSHNVGTHDRCGTTVEPMVKQQWFVRM 370

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------- 215
                  +   ++    +LP  R  +        ++D  +SR+ +               
Sbjct: 371 DELIKPAVEAVKNGDIQLLPK-RMEKTYFNWTDNIRDWCISRQLWWGHRIPAYYCPDCGE 429

Query: 216 -------------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                         G    +     +  W  +     +T G+ D  +     F+P D+ V
Sbjct: 430 MVVAKAAPEKCPKCGCDHMEQDPDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTDVLV 488

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G DI+ F    + +  +      P    +F       +G K+SKSLGN IDP+EVI++ 
Sbjct: 489 TGYDIIFFWVIRMIFSGYEQMGKAPFHTVLFHGLVRDSQGRKMSKSLGNGIDPLEVIDKY 548

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR  L+   A G D  +  + ++   N   AN + N  SR + M L+  +   P+ 
Sbjct: 549 GADALRLTLITGNAPGNDMRFYWERVEASRN--FANKVWN-ASRFIMMNLEGSEIKEPSL 605

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                +D+ ILS  + + +++ ENM    +  A+ +V   + +   D Y +  K     K
Sbjct: 606 DELKPADKWILSKVNTLAKDVTENMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNK 665

Query: 439 T-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +P  A+   +    V+ +   LL  F+P +  +IF  L   ++        +
Sbjct: 666 ENDPASANAAFWTLKTVLTEALKLLHPFMPFITEEIFCTLHPEEDTIMLAKWPE 719



 Score = 77.1 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 61/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 38  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRYKRMQGYNALWQPGTDHASIATEVK 97

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + D+      +    +  S  ++    T +K   
Sbjct: 98  VIENLKKQGIDKRDLGREGFLEKCWEWRDEYGSRIINQLKKMGSSADWERERFTMDKGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +    ++ K+ +KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 158 EAVLEVFVKLYEKGLIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 215


>gi|169831629|ref|YP_001717611.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638473|gb|ACA59979.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 881

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 141/380 (37%), Gaps = 42/380 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+      +F R+    +  +          +P  R  ++       ++D  
Sbjct: 346 HCYRCQTMVEPTLSRQWFVRMKPLAEPAIKAVREGRIRFVPE-RFTKIYLDWLENIRDWC 404

Query: 209 LSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDALTNYLT 240
           +SR+   WG  I +                                ++  W  +     +
Sbjct: 405 ISRQ-LWWGHRIPVWYCDDCGETVASGTDLSACPACGRENIEQDPDVLDTWFSSALWPFS 463

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+         +F+P  + V G+DI+ F    + +         P  +       +  
Sbjct: 464 TLGWPGKTA-DLDRFYPTSVLVTGRDIIFFWVARMIFSGLKFMDREPFAEVFIHGLVLDA 522

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN +DPIEVIE+ G D+LR+ LV     G D  +  + L+   N   AN +
Sbjct: 523 LGRKMSKSLGNGVDPIEVIEKYGADSLRFMLVTGNTPGNDLRFHFEKLESSRN--FANKL 580

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR V + L DY      PG    +D  ILS     L      ++   +  A   + 
Sbjct: 581 WN-ASRFVLLNLGDYRPDKAAPGTLELADRWILSRFGAALARTTAGLEAYELGEAARALY 639

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + +   D Y +  KP   + T+ +RA    YV V V+R    LL  F+P +  +++  
Sbjct: 640 EFIWDEFCDWYIELVKPRLYQGTDEERA-VAQYVLVRVLRSTLELLHPFMPFITEELWQH 698

Query: 477 LFVADEN---RCFQSLDQRL 493
           L    E      + + +  L
Sbjct: 699 LPHEGETIMRTAWPTAEHGL 718



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I         + H+GHA    + DVL R+ R+ G + L+  GTD  G      
Sbjct: 35  TGREPYSIVMPPPNVTGELHMGHALNNTLQDVLTRWRRMQGFETLWLPGTDHAGIATQAR 94

Query: 62  AQ-------------------NAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +  + +   R +    D S + F  T ++ 
Sbjct: 95  VEGQLAQEGLTKYDLGREKFLERVWEWKANYGHRITTQLRRLGASCDWSRERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++ ++G IY+  Y   +  R     +D EV  
Sbjct: 153 CSAAVREVFLRLYEEGLIYRDYYIVNWCPRCSTTISDIEVEH 194


>gi|291537986|emb|CBL11097.1| valyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 887

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/414 (20%), Positives = 158/414 (38%), Gaps = 46/414 (11%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG---------ADGQYYNAQHNPVQWMEEEGYFFRL 169
            Y G Y G           +D   +G          +   ++     V+ M ++ +F ++
Sbjct: 311 HYAGKYEGMDRYECRKALVEDLEKQGLLVKVEPHSHNVGTHDRCGTTVEPMVKQQWFVKM 370

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------- 215
                  +   ++    +LP  R  +        ++D  +SR+ +               
Sbjct: 371 DELIKPAVEAVKNGDIQLLPK-RMEKTYFNWTDNIRDWCISRQLWWGHRIPAYYCPDCGE 429

Query: 216 -------------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                         G    +     +  W  +     +T G+ D  +     F+P D+ V
Sbjct: 430 MVVAKTAPEKCPKCGCDHMEQDPDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTDVLV 488

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G DI+ F    + +  +      P    +F       +G K+SKSLGN IDP+EVI++ 
Sbjct: 489 TGYDIIFFWVIRMIFSGYEQMGKAPFHTVLFHGLVRDSQGRKMSKSLGNGIDPLEVIDKY 548

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR  L+   A G D  +  + ++   N   AN + N  SR + M L+  +   P+ 
Sbjct: 549 GADALRLTLITGNAPGNDMRFYWERVEASRN--FANKVWN-ASRFIMMNLEGSEIKEPSL 605

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                +D+ ILS  + + +++ ENM    +  A+ +V   + +   D Y +  K     K
Sbjct: 606 DELKPADKWILSKVNTLAKDVTENMDKYEMGIAVQKVYDFIWDEFCDWYIEITKTRTYNK 665

Query: 439 T-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +P  A+   +    V+ +   LL  F+P +  +IF  L   ++        +
Sbjct: 666 ENDPASANAAFWTLKTVLTEALKLLHPFMPFITEEIFCTLHPEEDTIMLAKWPE 719



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 61/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 38  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRYKRMQGYNALWQPGTDHASIATEVK 97

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + D+      +    +  S  ++    T +K   
Sbjct: 98  VIENLKKQGIDKRDLGREGFLEKCWEWRDEYGSRIINQLKKMGSSADWERERFTMDKGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +    ++ K+ +KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 158 EAVLEVFVKLYEKGLIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 215


>gi|188585735|ref|YP_001917280.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350422|gb|ACB84692.1| valyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 885

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 157/412 (38%), Gaps = 41/412 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   S    L+D+ Y  + E +  + G   +     V+ +  + +F ++    
Sbjct: 312 YSGMDRYECRKSVIQDLKDQGYLLEIEDHNHSIGH-CHRCDTVVEPLVSKQWFVKMKPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              +   +      +P  R  ++       ++D  +SR+   WG +IP            
Sbjct: 371 GPAIDVVDKGDVKFVPA-RFEKIYRNWMENIRDWCISRQ-IWWGHRIPAWYCQCGEIIVS 428

Query: 222 -DDPQ--------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
             DP                ++  W  +     +T G+ D  D    KF+P D+ V G D
Sbjct: 429 RKDPDSCPSCGESGLEQDPDVLDTWFSSALWPFSTMGWPDETD-DLQKFYPTDVLVTGYD 487

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + +         P              G K+SKSLGN IDP+E+I+E G D 
Sbjct: 488 IIFFWVARMIFMGLEFMKERPFDDVFIHGLVRDAHGRKMSKSLGNGIDPLEIIDEYGADT 547

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGA 382
           LRY LV  I  G D  +  D ++   N   AN I N  SR   M L +Y  M   P    
Sbjct: 548 LRYTLVTGITPGNDMRFSYDKVEASRN--FANKIWN-ASRFAIMNLDNYQPMELSPEDDR 604

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            + +D+ IL   + V+ ++   M    +  A   +   +     D Y +  K   L + +
Sbjct: 605 LSLADKWILHRMNEVIDDVTRLMDKYELGEASKTLYEFIWSEFCDWYIEMAK-IRLYQGS 663

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            +  S    + V  +  +  LL  F+P L+ +I   L   DE        ++
Sbjct: 664 EEEKSLTQEILVRGLDTILRLLHPFMPFLSEEIRSHLPHTDELLVTSKWPEK 715



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 19/173 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K  +           H+GHA +  + DV+ RF R+ G D L+  GTD  G       +
Sbjct: 36  RDKFSVVIPPPNVTGSLHMGHALDNTLQDVIVRFKRMQGYDTLWMPGTDHAGIATQTKVE 95

Query: 64  NA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                                    + +    +  +    L +S D      T ++    
Sbjct: 96  EHLAQEDGVSKYDLGREKFLEKVWAWKETYHDSITNQLKKLGVSVDWSRERFTMDEGCSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++  + +KG IY+G Y   +  R     +D EV    D         P+
Sbjct: 156 AVREVFVSLYEKGLIYQGDYIINWCPRCYTALSDIEVEHMEDQGTLTHIKYPL 208


>gi|282850551|ref|ZP_06259930.1| valine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580044|gb|EFB85448.1| valine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 885

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/411 (20%), Positives = 155/411 (37%), Gaps = 38/411 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   +       +   E    +          + +  +  ++ M  + +F  +    + 
Sbjct: 315 NGLPREEARKQVVAELKELGLLEKIDDHDHAVGHCSRCNTIIEPMVSKQWFVDMKPLAEP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L   + H    +P  R  +        ++D ++SR+   WG +IP              
Sbjct: 375 ALKVVKDHEVEFVPE-RFTKTYVNWLENIRDWTISRQ-LWWGHRIPAWYCDNCGETIVSR 432

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                          DP  ++  W  +      T G+       K +++P  + V G DI
Sbjct: 433 EDITECPHCHGHVTQDPD-VLDTWFSSGLWPFATMGWPKQTPELK-QWYPTSVLVTGYDI 490

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + + A      +P             +G K+SKSLGN I+P+EVI++ G DAL
Sbjct: 491 IFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGHKMSKSLGNGINPLEVIDQYGADAL 550

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV     G D  +  + ++   N + AN I N     +  +    +  +PT    T 
Sbjct: 551 RFTLVTGNTPGNDMRFYMERVEA--NRNFANKIWNASKFVLMNLTNYDESFVPTADDLTL 608

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           SD+ I+   +  +Q +  N+    +  A + V   +     D Y +  KP    ++N   
Sbjct: 609 SDQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRLYSESNERD 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             TV Y+ V ++R +  LL  F+P +   I+  L    ++       + LK
Sbjct: 669 RRTVQYLLVIILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVTKWPEALK 719



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA +  + D+L RF R+ G +VL+  GTD  G      
Sbjct: 35  TNKEPFSIVLPPPNVTGMLHMGHALDNTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIK 94

Query: 62  AQNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                           K + D   +  R +    D + + F  T ++
Sbjct: 95  VEEMLAKEEGKSRYDLGREKFVERVWEWKKEYGDTIVKQIRSLGASCDWNRERF--TLDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   R ++  + +KG IY+G     +  R     +D EV    +  +      PV+  
Sbjct: 153 GYYHAVREVFVSLYEKGLIYRGERIINWCPRCATALSDVEVEHEDEHGHLWHIKYPVKGE 212

Query: 161 EEE 163
           +  
Sbjct: 213 DNR 215


>gi|70941249|ref|XP_740936.1| methionine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56518992|emb|CAH87109.1| methionine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 504

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 199/345 (57%), Gaps = 9/345 (2%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           +S YQD+LL +   +P++I P + RNE++  +K  L+DLS SR  F WGI +P+DP+++M
Sbjct: 1   MSKYQDRLLQHIHDNPDYIQPEKNRNEILQRLKEPLEDLSCSRTKFSWGIPVPNDPKHVM 60

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK 288
           YVW+DAL NY +        D  K K+WP D+ +IGKDI+ FHA+ +P  L+S N+ LPK
Sbjct: 61  YVWMDALINYYSN---CFINDQEKMKYWPPDIQIIGKDIVWFHAVIFPTILMSVNIELPK 117

Query: 289 KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            VFSHGF+L   G+K+SKSL NVIDP E+IE  G DA R+ +V+E   G D  +D D L 
Sbjct: 118 CVFSHGFVLASDGKKMSKSLKNVIDPKEIIEAYGSDAFRFHVVKESKTGYDMRFDIDNLV 177

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              N+DLA+ IGNLV R++S+     +  IP    + + D  +       +  I   M+N
Sbjct: 178 DMCNSDLADTIGNLVQRTLSLCFLSNNAKIPPL--YDDIDIELPFCMLHFINRIEYYMKN 235

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +H+   + +++  +++++     PW+ K ++  ++   ++ + +E I  +A  +   V
Sbjct: 236 FRVHKFCEKTVNVCKDLNKFLTDLAPWKYKQESEQNKKLHIIRLMLESIYFIAHYIDIVV 295

Query: 467 PKLANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           P +A++IF  L     +          L+ G +++     +F +F
Sbjct: 296 PTIASQIFSQLNTPKRKIVDLNPWLNNLEEGVIINNDH-VLFKKF 339


>gi|134300393|ref|YP_001113889.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134053093|gb|ABO51064.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 879

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 162/411 (39%), Gaps = 41/411 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L    Y    E    A G  Y   +  ++    + +F ++    
Sbjct: 313 YQGLDRFECRKQIVRDLEAMGYLVKVEDISHAVGHCYR-CNTAIEPALSKQWFVKMKPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +  +   +      +P  R  ++       ++D  +SR+   WG +IP            
Sbjct: 372 EPAIQAAKDGRIKFIPE-RFTKIYLNWMENIRDWCISRQ-LWWGHRIPVYYCQDCEEMVA 429

Query: 222 ---------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                          +    ++  W  +     +T G+ +  +     F+P  + V G+D
Sbjct: 430 SITPITKCSKCGGKVEQDNDVLDTWFSSALWPFSTLGWPEKTE-ELEHFYPTSVLVTGRD 488

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVD 323
           I+ F    + +         P  K+VF HG +L   G K+SKSLGN +DP+++IE  G D
Sbjct: 489 IIFFWVARMIFSGLRFMEEEPF-KEVFIHGLVLDSLGRKMSKSLGNGVDPLDIIESHGAD 547

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +LR+ L+     G D  +  + L    N   AN + N  SR V M L DYD      G +
Sbjct: 548 SLRFMLITGNTPGNDLRFHFERLDGARN--FANKLWN-ASRFVMMNLGDYDPT-SQGGQY 603

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T +D  ILS      +++ + ++   +  A   +   +     D Y +  KP    KT P
Sbjct: 604 TLADRWILSRLQGTAKDVTDFLERYELGEAARVLYEFIWSEFCDWYIELAKPRLFGKTTP 663

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           +   T  +V V+V+RQ+  +L  F+P +  +I+  L    E        + 
Sbjct: 664 EDRVTAQHVLVQVLRQVLEMLHPFMPFITEEIWQKLPHQGETIMLAQWPKA 714



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 18/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++    I         Q H+GHA +  + D+L R+ R+ G + L+  GTD  G      
Sbjct: 35  KDKTPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWRRMQGYNALWIPGTDHAGIATQAK 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +Q           L  S  +D    T ++   
Sbjct: 95  VEEQLAKECQSKYDLGREKFLERVWAWKEQYGNRITTQLRHLGASCDWDRERFTMDEGCS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++ K+ ++G IY+  Y   +    +   +D EV              P +   EE
Sbjct: 155 KAVLEVFVKLFEQGLIYRDYYITNWCPHCQTTISDIEVEHQDKPGQLYYIKYPAKETPEE 214


>gi|313894948|ref|ZP_07828507.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976401|gb|EFR41857.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 887

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 143/374 (38%), Gaps = 39/374 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++ +  + +F R+    +  ++         +P  R  ++       ++D  
Sbjct: 349 HCSRCGTTIEPLVSKQWFVRMEELAEPAIAAVRDGRIRFVPD-RFTKIYENWLENIRDWC 407

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 408 ISRQ-LWWGHRIPAWHCDDCGETSVSREDLTACAHCGSTKIRQDEDVLDTWFSSGLWPFE 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ D+    +  F+P    V G DI+ F    +         ++P             
Sbjct: 467 TMGWPDDTKDLR-HFYPTAALVTGYDIIFFWVARMVMMGLRFGGDVPFRDIFIHGLVRDS 525

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   AN I
Sbjct: 526 EGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--FANKI 583

Query: 359 GNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR + M  +  D    P    +T +D  ILS C+   +++  N++   +  A   +
Sbjct: 584 WN-ASRYMLMNFEGADTSFVPAAEDYTLADRWILSRCAVTARDVTANLEKYELGEAGRTI 642

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K     K N    +T LYV   V+ +   LL  F+P L  +I+ 
Sbjct: 643 YEFLWSEFCDWYIELTKARLYDKENVRAKNTALYVLRTVLERTLRLLHPFMPFLTEEIWQ 702

Query: 476 ILFVADENRCFQSL 489
            L    E+      
Sbjct: 703 KLPHEGESIMTAHW 716



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + RE   +         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 38  ESREPYSVVIPPPNVTGQLHMGHALDNTLQDILVRYQRMRGKNVIWVPGCDHAGIATQAK 97

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            + +                      + +Q          +L  S D      T +    
Sbjct: 98  VEESLRAEGTTRFDLGREKFLERVWAWKEQYGDRIMYQLRMLGSSCDWARERFTMDGGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R  +  + ++G IY+G     +        +D EV    +  +       ++  +E
Sbjct: 158 RAVREAFVSLYEQGLIYQGTRITNWCPSCTTAISDIEVNHETEEGHLWHLRYAIEGTDE 216


>gi|291333221|gb|ADD92931.1| putative tRNA binding domain protein [uncultured archaeon
           MedDCM-OCT-S04-C14]
          Length = 723

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 120/569 (21%), Positives = 207/569 (36%), Gaps = 93/569 (16%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY 91
           D+  RF R  G  VL  +G+DEHG  I   A+  G+T +  VD+           L  S+
Sbjct: 4   DIQFRFERALGNRVLMVSGSDEHGTPITVTAETQGITPQQVVDEYHEINLKALLDLGCSW 63

Query: 92  DD-------------FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD---EAY 135
                          F RTT+  H    +  ++ +   G   +     ++ L +     +
Sbjct: 64  STTLDPRGPEFGGALFNRTTDSEHKRMVQENFQSLEKAGFFERKTTEQYFELNEDGSGRF 123

Query: 136 YNDDEVYKGAD--------GQYYNAQ---------HNPVQWM---------EEEGYFFRL 169
             D  V             G   +A           NPV  M         E E  F+RL
Sbjct: 124 LPDRYVEGTCPSCEATDARGDQCDACGATYEAVELKNPVSKMNPSAKVVIRETEHLFYRL 183

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ---- 225
             +Q+  L  +  H E +  +  R     ++  GL   +++R    WGI +P        
Sbjct: 184 DLFQN-ALEEHAQHQEKVWKVNVREMTKQWLDMGLHPRAVTRD-LSWGIPVPLSGDSWDG 241

Query: 226 YIMYVWIDALTNYLTT----------------TGYLDNPDGSKAKFWPADLHVIGKDILR 269
             +YVW +A+  Y T                   +    + ++    P  L+ +GKD + 
Sbjct: 242 KCVYVWFEAVQGYSTCARIWAQRQADALPDGADTWKRWWNVAEDGTKPRHLYFLGKDNIP 301

Query: 270 FHAIYWPAFLL-------------------SANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           FH I WPA +L                      L L   V +  +++  G + SKS  + 
Sbjct: 302 FHTIIWPALILGLNHAHKGLSSTDPIALPGPGELALESDVPAMQYLMLAGGQFSKSRKHA 361

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +     +E    D+LRY+L   +    D  ++      ++N +L    GN V R +++  
Sbjct: 362 VWLPSFLERYHPDSLRYYLSIVMPEFSDSDFNWPDFVAKINTELNANYGNFVHRVLTLGA 421

Query: 371 KDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +       +P    +     +S      R   +I  ++Q      AL Q++S+    ++ 
Sbjct: 422 RLPQHERKSPFEPHDGHACVQSHKDHVERAFNDITASLQRHRYKEALQQIMSVSQYGNQI 481

Query: 428 FDAQKPWE-LKKTNPDRASTVLYV--TVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
             A  PW+ L         ++  +     + R LAI  Q F+P  A ++++ L    E  
Sbjct: 482 LQAAAPWKHLNGPQEGYEDSIATLAFCWRISRFLAITTQPFMPTSAQQLWENLAQPSE-V 540

Query: 485 CFQSLDQRL---KPGFMLHKTFDPIFPRF 510
              + D+ +    P   L  T  P+F R 
Sbjct: 541 SLSAWDEAINWQSPLTWLEDTPQPLFDRL 569


>gi|323703627|ref|ZP_08115270.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531399|gb|EGB21295.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 882

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 152/376 (40%), Gaps = 40/376 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    +  ++ M  + +F ++    +  +   +      +P  R  ++       ++D  
Sbjct: 350 HCYRCNTAIEPMLSKQWFVKMKPLAEPAIEVVKDGRIKFIPE-RFTKIYLNWMENIRDWC 408

Query: 209 LSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           +SR+ +                             G K+  DP  ++  W  +     +T
Sbjct: 409 ISRQLWWGHRIPVYYCQDCDEMAASTTPVTKCSKCGGKMEQDPD-VLDTWFSSALWPFST 467

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH- 298
            G+ +        F+P  + V G+DI+ F    + +         P  K+VF HG +L  
Sbjct: 468 LGWPEKTA-ELEHFYPTSVLVTGRDIIFFWVARMIFSGMYNMHEEPF-KEVFIHGLVLDA 525

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN +DP+EVI+  G D+LR+ L+     G D  +  + L        AN +
Sbjct: 526 QGRKMSKSLGNGVDPLEVIDSHGADSLRFMLITGNTPGNDLRFHFERLDGA--RSFANKL 583

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR V M L DYD      G +T +D  ILS     + ++ + ++   +  A   + 
Sbjct: 584 WN-ASRFVMMNLTDYDPA-AQGGPYTLADRWILSRLQGTVADVTDFLERYELGEAARVLY 641

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     D Y +  KP    KT P+   T   V V+V+R+   LL  F+P +  +I+  
Sbjct: 642 DFIWSEFCDWYIELAKPRLFGKTTPEDRITTQQVLVQVLRKTLELLHPFMPFITEEIWQK 701

Query: 477 LFVADENRCFQSLDQR 492
           L    E        Q 
Sbjct: 702 LPHQGETIMLAPWPQA 717



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 23/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G + ++  GTD  G      
Sbjct: 38  KDKKPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWRRMQGYNAMWVPGTDHAGIATQAK 97

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +Q           L  S  +D    T ++   
Sbjct: 98  VEEQLAKEGLTKYDLGREKFLERVWAWKEQYGNRITTQLRRLGASCDWDRERFTMDEGCS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQ 158
              + ++ ++ ++G IY+  Y   +    +   +D EV             Y  + NP +
Sbjct: 158 KAVQEVFIRLFEQGLIYRDYYITNWCPHCQTTISDIEVEHQDKPGQLYYIKYPCKDNPDE 217

Query: 159 W 159
           +
Sbjct: 218 Y 218


>gi|291532689|emb|CBL05802.1| valyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 841

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/411 (21%), Positives = 157/411 (38%), Gaps = 38/411 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L+ + Y    E ++ A G   +     V+ +  + +F ++ +  
Sbjct: 269 YAGLDRYECRKQLIEDLKQQGYLISIEEHEHAVGH-CSRCSTTVEPLVSKQWFVKMESLA 327

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
                  +S     +P  R +++       ++D  +SR+ +                   
Sbjct: 328 KPAAEAVKSGKIKFVPE-RFSKIYCNWLDNIRDWCISRQLWWGHRIPAWYCDDCGATIVE 386

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G K     + ++  W  +      T G+ +     K +F+P  + V G D
Sbjct: 387 NEDVTVCPHCGSKHVHQDEDVLDTWFSSGLWPFETMGWPEQTAELK-QFYPTSVLVTGYD 445

Query: 267 ILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F         L     +P K VF HG +   +G K+SKSLGN IDP+EVIE+ G D 
Sbjct: 446 IIFFWVARMVMMGLEFGKDIPFKHVFIHGLVRDSQGRKMSKSLGNGIDPVEVIEKYGADT 505

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAF 383
           LR+ L+     G D  +  + ++   N   AN + N  SR + M L+ +D    P    +
Sbjct: 506 LRFMLITGNTPGNDMRFYWERVESARN--FANKLWN-ASRFMLMNLEGFDKTFVPEASDY 562

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T +D+ ILS  ++    I EN++   +  A   +   +     D Y +  K     K N 
Sbjct: 563 TLADKWILSRYAKTAISITENLEKFELGEAGRSLYDFIWNEFCDWYIELSKARLYDKENV 622

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                  YV   V+     LL  F+P +  +I+  +    ++         
Sbjct: 623 RPRKVAQYVLGYVLEHTLRLLHPFMPFITEEIWQHIPHEGKSIMVADWPTG 673



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 18/165 (10%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA---------- 61
                  Q H+GHA +  + D+L RF R+ G + L+  GTD  G                
Sbjct: 2   PPPNVTGQLHMGHAMDNTLQDILIRFRRMQGYNTLWMPGTDHAGIATQAKVDAQLREQGV 61

Query: 62  ------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKI 113
                  +        + ++     +     L  S  +D    T ++      R ++ ++
Sbjct: 62  SRYDIGREKFLEHAWAWKEKYGNRIKYQIRTLGSSCDWDRERFTMDEGCSHAVREVFVQL 121

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             KG IY+G     +        +D EV    +  +       V+
Sbjct: 122 YKKGLIYQGKRITNWCPHCNTALSDIEVEHQNEQGHLYHLKYQVE 166


>gi|227824227|ref|ZP_03989059.1| valyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904726|gb|EEH90644.1| valyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 885

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 144/373 (38%), Gaps = 39/373 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H+ V+ +    +F ++       +   E      +P  R  +  +     + D  
Sbjct: 349 HCQRCHHVVEPLISTQWFVKMKPLVKAAVECVEDGRIQFVP-NRFTKTYTNWMDNIHDWC 407

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               +  +  W  +     +
Sbjct: 408 ISRQ-IWWGHRIPVWYCDDCGKQMASRTDLTECPHCHSHNIHQDEDALDTWFSSGLWPFS 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK 299
           T G+ D  D    +F+P  + V G DI+ F         +     +P K VF HG +  +
Sbjct: 467 TFGWPDKTD-ELQQFYPTSVLVTGYDIIFFWVARMITMGMEFMKEIPFKHVFIHGLVRDE 525

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP+EV+++ G D LR+ L+     G D  +  + ++   N   AN I
Sbjct: 526 QGRKMSKSLGNGIDPLEVVDKYGADTLRFMLITGNTPGNDMRFYWNRIEATRN--FANKI 583

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR   M L  YD         T +D  ILS     ++++   ++   +  A   + 
Sbjct: 584 WN-ASRFALMNLDGYDAS-AKRAPLTLADRWILSRLQHTIKDVSSFLEKFELGEAGRLIY 641

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     D Y +  KP    K +P+  ST  +V   V+     LL  ++P +  +I+  
Sbjct: 642 DFIWGEVCDWYIELIKPRLYDKEHPEERSTAQFVLCRVLGDAMKLLHPYMPFITEEIWQH 701

Query: 477 LFVADENRCFQSL 489
           L    E+      
Sbjct: 702 LPHEGESIMIAPW 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 19/176 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+   +         + H+GHA +  + D+L R+HR+ G +  +  G D  G      
Sbjct: 36  KSRKPFSVVIPPPNITGKLHMGHALDNTLQDILVRWHRMMGDNTCWLPGYDHAGLATQIK 95

Query: 62  AQNAGVT-----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                         + ++           L IS  +D    T ++  
Sbjct: 96  VEEELKKKENLTRYDLGREKFLERVWQWKEEYGDRIVTQLKSLGISCDWDRQRFTMDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               R  +  + +KG IYKG     + +      +D EV    D  +    + P++
Sbjct: 156 SRAVREAFVSLYEKGLIYKGTRIINWCVNCRTALSDVEVEHQDDEGHLWYVNYPIE 211


>gi|229169200|ref|ZP_04296914.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614266|gb|EEK71377.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 881

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 12/343 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF 214
            +Q  EEE   F    +++  L + E+  ++ +  +      I                 
Sbjct: 377 ELQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPAWYHKETGEVYVGTEA 436

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
              ++  +    ++  W  +     +T G+ +       KF+  D  V G DI+ F    
Sbjct: 437 PADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKFYSTDALVTGYDIIFFWVSR 496

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +     +   P    +        +G K+SKSLGN IDP++VIE+ G DA+RYFL   
Sbjct: 497 MIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIEKYGADAMRYFLSTG 556

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESIL 391
            A G+D  +  + ++   N    N I N  SR V M + D         G  + +D+ IL
Sbjct: 557 SAPGQDLRFSMEKVESTWN--FINKIWN-ASRFVLMNMDDMKYEEIDLTGEKSVADKWIL 613

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVL 448
           +  +  ++ +  NM       A   + + + +   D Y +  K P  L   +     T  
Sbjct: 614 TRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAKLP--LYGEDEVAKKTTR 671

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   V+ Q   LL  F+P +  KI+  L    E+    +   
Sbjct: 672 SILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPT 714



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  EKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + ++ + + R     + +  D      T ++   
Sbjct: 97  VEGKLREEGISRYDLGREKFLEKAWEWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ +K  IY+G Y   +        +D EV  
Sbjct: 157 NAVNKVFVQLYEKDLIYRGEYIINWDPATRTALSDIEVIH 196


>gi|294501414|ref|YP_003565114.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351351|gb|ADE71680.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 880

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 137/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADKAVDLQKQEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGEVYVDHEAPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P ++ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTNVLVTGYDIIFFWVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVIE+ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMEVIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GITFEELDLSGEKSVADKWILTRLNETIEHVTKLADKYEFGEVGRILYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+     LL  F+P +  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDNTMRLLHPFMPFITEEIWQSLPHEGESITVA 709

Query: 488 SLDQ 491
              +
Sbjct: 710 KWPE 713



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 38  EKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                T  + ++ +   R     L +  D      T ++    
Sbjct: 98  EEKLRSEGKSRYDLGRENFVAETWKWKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVTLYKKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|154499847|ref|ZP_02037885.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
 gi|150271445|gb|EDM98702.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
          Length = 896

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 138/374 (36%), Gaps = 40/374 (10%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +       +          V+ +    +F ++    ++ L          +P  R ++
Sbjct: 334 LLEKVEPHAHNVGTCYRCGTDVEPIISAQWFVKMGPLAEEALRVVNDGEVKFVPD-RFSK 392

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYI 227
             +     + D  +SR+   WG +IP                                 +
Sbjct: 393 TYTNWMENVHDWCISRQ-LWWGHRIPAWTCEECGHITVSETDPTECEHCHSKHIKQEDDV 451

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ D        F+P D+ V G DI+ F    + + A   +   P
Sbjct: 452 LDTWFSSALWPFSTLGWPDENSEDYKYFYPTDVLVTGYDIIFFWVARMIFSACEHTGKPP 511

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                        KG K+SKSLGN IDP+E+ E+ G DALR+ LV   + G D  +  + 
Sbjct: 512 FHTVFIHGLVRDDKGRKMSKSLGNGIDPLEIAEKYGADALRFNLVTGNSPGNDMRFYTER 571

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +   N   AN I N  SR + M L         P      D  ILS  + ++ E+ ENM
Sbjct: 572 CEAMRN--FANKIWN-ASRFLMMNL--TIDKCELPEKLEMEDRWILSKLNSLIPEMTENM 626

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
               +  A  ++   + +   D Y +  K   L+  + +       V   V+ Q+  LL 
Sbjct: 627 DKYELGVAAQKIYDFIWDSYCDWYIELTKA-RLQGDDEEAKVNAQKVLCYVLTQILKLLH 685

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 686 PFMPFITEEIWQAL 699



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 23/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L RF R++G   L+  GTD  G       
Sbjct: 35  DKKPFTIVMPPPNVTGQLHMGHAMDSTLQDILIRFKRMEGYAALWVPGTDHAGIATQIKV 94

Query: 63  QNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +                             + D+  +  + +    D S   F  T ++ 
Sbjct: 95  EEELRKNEGLTRYDLGRDKFLERVWDWKHKYGDRIVQQQKKLGASCDWSRARF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +  R ++  +  KG IYKG     +        +D EV              P++  E
Sbjct: 153 LSNAVRHVFVSLYKKGLIYKGSRIINWCPHCVTALSDAEVEYKDKPGNLWHLKYPIKGEE 212


>gi|56964386|ref|YP_176117.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822070|sp|Q5WEQ4|SYV_BACSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56910629|dbj|BAD65156.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 880

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 34/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLS-YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    ++ L     +  +     +R  +        ++D  +SR+   
Sbjct: 355 VEPYLSTQWFVKMRPLAEEALKLQEYADTKVTFVPQRFEQTYIRWMENIRDWCISRQ-LW 413

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D      
Sbjct: 414 WGHQIPAWYHKETNEIYVGKEPPRDSENWRQDEDVLDTWFSSALWPFSTMGWPDEEAPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P ++ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTNVLVTGYDIIAFWVSRMIFQGKAFTGQRPFKDVLIHGLIRDAEGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP EVI++ G D+LR+FL      G D  +  + ++   N    N I N  SR   M +
Sbjct: 534 VDPQEVIDKYGADSLRFFLATGSTPGNDLRFYWEKVESTWN--FGNKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
             +           + +D+ IL+     ++ +   +       A   + S + +   D Y
Sbjct: 591 DGFSYSDIDINQEKSIADKWILTRLQETVESVTRLIDAYEFGEAGRVLYSFIWDDVCDWY 650

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +  K   L   N         V   V+ Q   +L  F+P +  +I+  L    E+    
Sbjct: 651 IEMAK-LALYGENEQAKQATRSVLAHVLDQTMRMLHPFMPFITEEIWQHLPHEGESITVA 709

Query: 488 SL 489
           + 
Sbjct: 710 NW 711



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         + H+GHA++  I D+LAR  R+ G D L+  G D  G       
Sbjct: 37  DKQPYSIVIPPPNVTGKLHLGHAWDATIQDILARTKRMQGYDTLWLPGMDHAGIATQAKV 96

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     +  + D+ ++  R+    + IS D      T ++   D
Sbjct: 97  EGKLREQGISKYDLGREAFLEKSWEWKDEYAKFIREQWAKVGISVDYSRERFTLDQGLSD 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++  + +KG IY+G Y   +  + +   +D EV  
Sbjct: 157 AVKEVFVSLYNKGLIYRGEYIINWDPQTKTALSDIEVIY 195


>gi|330838350|ref|YP_004412930.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746114|gb|AEB99470.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 886

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 158/389 (40%), Gaps = 56/389 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +  H  V+ +  + +F ++ +     +   +      +P       +++++  ++D  
Sbjct: 346 HCSRCHTTVEPLVSKQWFVKMESLAKPAIEAVQDGRIKFVPERFTKIYVNWLE-NIRDWC 404

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 405 ISRQ-LWWGHRIPAWYCTDCKETIVSREDVETCPKCGGHHLHQDEDVLDTWFSSGLWPFE 463

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-- 298
           T G+ +     K +F+P  + V G DI+ F    W A ++   L   K +  H   +H  
Sbjct: 464 TMGWPEETPELK-QFYPTSVLVTGYDIIFF----WVARMVMMGLEFGKDIPFHHVFIHGL 518

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               +G K+SKSLGN IDP+EVI++ G D LR+ L+     G D  +  + ++   N   
Sbjct: 519 VRDSEGRKMSKSLGNGIDPVEVIDKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--F 576

Query: 355 ANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN + N  SR + M L+D+D G  PT   +T +D  ILS C +    + +N++   +  A
Sbjct: 577 ANKLWN-ASRFMLMNLEDFDAGFTPTAEDYTLADRWILSRCQKTAAGVTQNLEKFELGEA 635

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              +   +     D Y +  K     K         T  YV   V+ +   LL  F+P L
Sbjct: 636 GRMIYEFIWSEFCDWYIELAKARLYDKDAAGERSKKTAQYVLSYVLERTLRLLHPFMPFL 695

Query: 470 ANKIFDILFVADENRC-----FQSLDQRL 493
             +I+    V  E R      +   D+ L
Sbjct: 696 TEEIWQR--VPHEGRSIMVAPWPEADESL 722



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  G D  G      
Sbjct: 35  EGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWRRMQGYNTLWMPGCDHAGIATQAK 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            + A                      + ++           L  S D      T ++   
Sbjct: 95  VEAALRAEGTNRYELGREKFTERVWQWKEEYGSRIMYQLRTLGSSCDWARERFTMDEGCS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++  + +KG IY+G     +        +D EV    +  +   
Sbjct: 155 HAVREVFVSLYEKGLIYQGTRITNWCPSCNTALSDIEVEHETEAGHLWH 203


>gi|135181|sp|P11931|SYV_BACST RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|143797|gb|AAA22879.1| valyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 880

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 138/365 (37%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    +  +   ++  +     ER  +        ++   +SR+   W
Sbjct: 356 IEPYLSTQWFVKMKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRHWCISRQ-LWW 414

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDSPDY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI++ G DALRYFL    + G+D  +  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKVEATWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  T +D  IL+  +  ++ + +  +          + + + +   D Y
Sbjct: 591 GGMTYEELDLSGEKTVADHWILTRLNETIETVTKLAEKYEFGERGRTLYNFIWDDLCDWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   V   V+     LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGDDEAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITV 708

Query: 487 QSLDQ 491
               Q
Sbjct: 709 APWPQ 713



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I         + H+GHA++  + D++ R  R+ G DVL+  G D  G       
Sbjct: 38  NKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHD 104
           +                     T  + ++ + + R       L + Y     T ++    
Sbjct: 98  EEKLRQQGLSRYDLGREKFLEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVSLYRKGLIYRGEYIINWDPVTKTALSDIEVVY 196


>gi|260888326|ref|ZP_05899589.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861862|gb|EEX76362.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 892

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 158/389 (40%), Gaps = 56/389 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +  H  V+ +  + +F ++ +     +   +      +P       +++++  ++D  
Sbjct: 352 HCSRCHTTVEPLVSKQWFVKMESLAKPAIEAVQDGRIKFVPERFTKIYVNWLE-NIRDWC 410

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +      
Sbjct: 411 ISRQ-LWWGHRIPAWYCTDCKETIVSREDVETCPKCGGHHLHQDEDVLDTWFSSGLWPFE 469

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-- 298
           T G+ +     K +F+P  + V G DI+ F    W A ++   L   K +  H   +H  
Sbjct: 470 TMGWPEETPELK-QFYPTSVLVTGYDIIFF----WVARMVMMGLEFGKDIPFHHVFIHGL 524

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               +G K+SKSLGN IDP+EVI++ G D LR+ L+     G D  +  + ++   N   
Sbjct: 525 VRDSEGRKMSKSLGNGIDPVEVIDKYGADTLRFMLITGNTPGNDMRFYWERVEAARN--F 582

Query: 355 ANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN + N  SR + M L+D+D G  PT   +T +D  ILS C +    + +N++   +  A
Sbjct: 583 ANKLWN-ASRFMLMNLEDFDAGFTPTAEDYTLADRWILSRCQKTAAGVTQNLEKFELGEA 641

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
              +   +     D Y +  K     K         T  YV   V+ +   LL  F+P L
Sbjct: 642 GRMIYEFIWSEFCDWYIELAKARLYDKDAAGERSKKTAQYVLSYVLERTLRLLHPFMPFL 701

Query: 470 ANKIFDILFVADENRC-----FQSLDQRL 493
             +I+    V  E R      +   D+ L
Sbjct: 702 TEEIWQR--VPHEGRSIMVAPWPEADESL 728



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  G D  G      
Sbjct: 41  EGKKPFSIVIPPPNVTGQLHMGHALDNTLQDILIRWRRMQGYNTLWMPGCDHAGIATQAK 100

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            + A                      + ++           L  S D      T ++   
Sbjct: 101 VEAALRAEGTNRYELGREKFTERVWQWKEEYGSRIMYQLRTLGSSCDWARERFTMDEGCS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++  + +KG IY+G     +        +D EV    +  +   
Sbjct: 161 HAVREVFVSLYEKGLIYQGTRITNWCPSCNTALSDIEVEHETEAGHLWH 209


>gi|255505616|ref|ZP_05347190.3| valine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266928|gb|EET60133.1| valine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 889

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 82/385 (21%), Positives = 152/385 (39%), Gaps = 39/385 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M ++ +F R+     + +   E      +P  R ++     
Sbjct: 344 VPHMHAVGTHDRCKTTVEPMVKQQWFVRMDEMAKEAIRALEDGELTFVPE-RFDKTYLHW 402

Query: 201 KSGLKDLSLSRKTFD----------------------------WGIKIPDDPQYIMYVWI 232
              ++D  +SR+ +                              G       +  +  W 
Sbjct: 403 LENIRDWCISRQLWWGHRIPAYYCDECGEVVVRRGGAPEKCPKCGCTHFTQDEDTLDTWF 462

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ D        F+P D+ V G DI+ F    + +     +   P    +
Sbjct: 463 SSALWPFSTLGWPDKTP-ELEYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKAPFHHVL 521

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   
Sbjct: 522 IHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERVEASR 581

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQL 409
           N   AN I N  SR + M L+  +     P    T++D+ ILS  + + +++ +NM+   
Sbjct: 582 N--FANKIWN-ASRFIMMNLEKAEIPEQMPKESLTQADKWILSKVNALAKDVTDNMEKFE 638

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  A+ +V   + E   D Y +  KP     T+  +A+ +      V+     LL  ++P
Sbjct: 639 LGIAVQKVYDFIWEEFCDWYIEMVKPRLYSDTDTTKAAALW-TLKAVLGNALKLLHPYMP 697

Query: 468 KLANKIFDILFVADENRCFQSLDQR 492
            +  +I+  L   +E+    S  + 
Sbjct: 698 FITEEIYCTLNPQEESIMIASWPEW 722



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D++ RF R+ G + L+  GTD          
Sbjct: 41  DKKPFTIVMPPPNVTGQLHMGHALDNTMQDIIIRFKRMQGYEALWQPGTDHAAIATEVKV 100

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + ++      +    L  S  ++    T ++    
Sbjct: 101 IEKLKEQGIDKDEIGREEFLKHAWAWKEEYGSRIINQLKKLGSSADWERERFTMDEGCSK 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               ++ K+ +KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 161 AVEEVFVKLYEKGYIYKGSRIINWCPVCQTSISDAEVLHEDQEGHFWHINYPVVGEE 217


>gi|86158812|ref|YP_465597.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775323|gb|ABC82160.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 1052

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 138/362 (38%), Gaps = 40/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   ++ +  + ++ R+       +   E      +P +  N  +++++  + D  
Sbjct: 359 RCQRSATILEPLISDQWYVRIEPLARPAIEAVEQGKTRFIPEQWTNTYMAWMR-NIHDWC 417

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I     P                           ++  W  +     +T
Sbjct: 418 ISRQ-LWWGHQIPAWYCPDGHVTVARETPEACSTCGKRELRQDEDVLDTWFSSGLWPFST 476

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +  D  +  F+P  +   G DI+ F    +          +P             K
Sbjct: 477 MGWPEQTDTLRT-FYPTSVMETGHDIIFFWVARMMMMGLHFMGEVPFRTVYLHPMVRDEK 535

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SK+ GNVIDP+ + E+ G DALR+ L    A G+D    K+ ++       AN + 
Sbjct: 536 GQKMSKTKGNVIDPLVITEQYGADALRFTLAALTAQGRDIKLAKERIEG--YRAFANKLW 593

Query: 360 NLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  SR   M L  Y+     P   A T +D  IL+   R + E  E +     + A   V
Sbjct: 594 N-ASRFALMNLAGYEERGEDPARAARTPADRWILARLQRTVNETVEALDAFRFNDAANAV 652

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + V     D Y +  K   L   +P+   +V  V V  ++    LL  F+P +  +++ 
Sbjct: 653 YAFVWHELCDWYIELSK-EALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWH 711

Query: 476 IL 477
           +L
Sbjct: 712 VL 713



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R    I           H+GHA    + DVL R+ R+ G + L+  GTD  G      
Sbjct: 45  RTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAGIATQMI 104

Query: 60  ------------------KAAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                             +A        K  +  +     + +   LD   + F  T ++
Sbjct: 105 VEKELKKAEKKSRHDLGREAFLERVWAWKEQYGSRIGEQHKALGASLDWQRERF--TMDE 162

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 R ++ ++ ++G IY+      +        +D EV  
Sbjct: 163 GLSRAVREVFVRLHEEGLIYREKKLINWCPDCRTALSDLEVEH 205


>gi|158321063|ref|YP_001513570.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141262|gb|ABW19574.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 884

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/367 (22%), Positives = 148/367 (40%), Gaps = 38/367 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +          V+ +  + +F ++ +     +   ++     +P  R  +       
Sbjct: 340 HSHNVGQCYRCDTVVEPITSDQWFVKMESLAAPAIDAGKNGDIKFIPD-RFTKTYLHWLE 398

Query: 203 GLKDLSLSRKTFDWGIKI----PDDPQY------------------------IMYVWIDA 234
            ++D  +SR+   WG +I      D  +                        ++  W  +
Sbjct: 399 NIRDWCISRQ-LWWGHRIPAYYCQDCGHIVVAKEAPTTCEKCNSTNFKQDEDVLDTWFSS 457

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSH 293
                +T G+ +        F+P D+ V G DI+ F  +      L     +P K VF H
Sbjct: 458 ALWPFSTLGWPEATK-ELEYFYPTDVLVTGYDIIFFWVVRMAFSGLEFMENVPFKHVFLH 516

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           G +   +G K+SKSLGN IDP+E+I++ G DALR+ LV   + G D  +  + L+   N 
Sbjct: 517 GLVRDAEGRKMSKSLGNGIDPLEIIDQYGADALRFTLVTGNSPGNDMRFHMEKLESSRN- 575

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN + N     +  +  D+         FT +D+ I+S  ++V +E+ ENM    +  
Sbjct: 576 -FANKLWNATRFVLMNLEVDHIEKSSVESNFTIADKWIISRMNKVAKEMTENMDKFELGI 634

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ ++   +     D Y +  KP  L   + +      Y    V+  +  LL  F+P + 
Sbjct: 635 AVQKLYDFIWSEYCDWYIELVKP-RLYGEDTEAKRAAQYTLTYVLENILKLLHPFMPFIT 693

Query: 471 NKIFDIL 477
            +I+  L
Sbjct: 694 EEIWQNL 700



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 23/181 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+ G + L+  G+D          
Sbjct: 35  DKKPFCIVLPPPNITGQLHMGHALDHTLQDILIRWKRMQGYETLWQPGSDHASIATEVKV 94

Query: 63  QNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                       + +  +     + + D  D S + F  T ++ 
Sbjct: 95  VEKIKAEEGLSKLEVGREGFLERAWKWKEEYGGRIVDQMKKLGDSCDWSRERF--TLDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +    ++ K+ +KG IY+G     +    +   +D EV       ++     P++  +
Sbjct: 153 LSNAVTEVFIKLYEKGLIYRGNRIINWCPDCKTSLSDAEVEHEEKVGHFWHISYPIKDSD 212

Query: 162 E 162
           E
Sbjct: 213 E 213


>gi|323140721|ref|ZP_08075640.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322414739|gb|EFY05539.1| valine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 911

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 144/412 (34%), Gaps = 21/412 (5%)

Query: 93  DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN--DDEVYKGADGQYY 150
               T E+            +   G + K           +   +  + +V      +  
Sbjct: 342 YEGMTREECRKAIV----ADLKADGYLVKVEEHSHAVGHCQRCGHAVESQVSTQWFVKME 397

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV----ISFVKSGLKD 206
                 V  +E+    F    +      + ++  ++ +  +               G   
Sbjct: 398 PLVKAAVDCVEDGRTQFVPERFTKTYTGWMDNIRDWCISRQIWWGHRIPVWYCDDCGEMS 457

Query: 207 LSLSRKTF--DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            S +  T     G       +  +  W  +     +T G+ D     K +F+P  + V G
Sbjct: 458 ASRTDLTVCPKCGSAHIHQDEDALDTWFSSALWPFSTMGWPDKTPLLK-QFYPTSVLVTG 516

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+ F    +          +P  K          +G K+SKSLGN IDP+EVI++ G 
Sbjct: 517 YDIIFFWVARMLIMGMEFMHEIPFDKVFIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGA 576

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D LR+ L+     G D  +  + ++   N   AN I N  SR   M ++ YD        
Sbjct: 577 DTLRFMLITGNTPGNDMRFYWERVEATRN--FANKIWN-ASRFALMNMEGYD-ANAKLAP 632

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
           +T +D+ ILS      + + E ++   +  A   +   +     D Y +  KP    K N
Sbjct: 633 YTLADKWILSRLQHTAKSVTEMLEKFELGEAGRMIYDFIWGEVCDWYIELAKPRLYNKEN 692

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            +  +T  +V   V+     LL  ++P +  +I+  L    E+       + 
Sbjct: 693 AEERATAQHVLATVLTSAMQLLHPYMPFITEEIYQCLPHEAESIMISKWPEA 744



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+HR+ G + L+  G D  G      
Sbjct: 63  EGKDAFSIVIPPPNITGQLHMGHALDNTLQDILIRWHRMMGHNTLWMPGYDHAGLATQIK 122

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
            +                         + +Q      +    L +S D   +  T ++  
Sbjct: 123 VEEVIKKEEGKTRYDLGREEFLKRVWEWKEQYGDRIINQLKHLGVSCDWERKRFTMDEGC 182

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               R ++  + +KG IYKG     + +      +D EV    D  +    + PV   E 
Sbjct: 183 SKAVREVFCTLFEKGLIYKGTRITNWCVNCNTALSDIEVEHKDDPGHLWYINYPVVEEEG 242

Query: 163 EGYFFRLS 170
                  +
Sbjct: 243 RSLMIATT 250


>gi|20807263|ref|NP_622434.1| valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81482270|sp|Q8RBN5|SYV_THETN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|20515771|gb|AAM24038.1| Valyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 879

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 88/410 (21%), Positives = 160/410 (39%), Gaps = 41/410 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+        L ++      E +    G  Y      V+ +  E +F ++    
Sbjct: 311 YEGLDRYEAREKIVKDLEEQGLLLKVEEHVHNVGHCYR-CDTVVEPLLSEQWFVKMEPLA 369

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              L   +      +P  R  ++ +     +KD  +SR+   WG +IP            
Sbjct: 370 KPALQVVKEGKIKFVPE-RFEKIYTNWLENIKDWCISRQ-LWWGHRIPAWYCEDCGHVTV 427

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              + ++  W  +     +T G+ +  +  K  F+P D+ V G 
Sbjct: 428 SREDPVKCEVCGSTNIHQDENVLDTWFSSALWPFSTMGWPEETEDLK-YFYPTDVLVTGY 486

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + + +      +P    +         G K+SKSLGN IDP+EVIE+ G D
Sbjct: 487 DIIFFWVARMIFMSLEFMKEIPFKYVLIHGLVRDALGRKMSKSLGNGIDPLEVIEKYGAD 546

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR+ LV   A G D  +  + ++   + + AN + N  SR V + L + D  +      
Sbjct: 547 TLRFTLVIGNAPGNDMRFSWEKVE--HSRNFANKLWN-ASRYVLLNLDENDTNLYL-DNL 602

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
             +D+ IL+  + +++EI +N++   +  A +++   V     D Y +  KP  L   N 
Sbjct: 603 ALADKWILTRYNNIVKEITDNLEKFELGVAASKLYDFVWSEFCDWYIELSKP-VLYSDNE 661

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +       V   V+     LL  F+P +  +I+  L    E+       +
Sbjct: 662 EAKKVTKSVLRYVLDNTLRLLHPFMPFITEEIWQNLPHEGESIMVAEWPK 711



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 57/178 (32%), Gaps = 19/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E++   I         + H+GHA +  + D+L R+ R+ G   L+  GTD          
Sbjct: 34  EKKPFTIVIPPPNVTGELHMGHALDNTLQDILIRWRRMQGYAALWIPGTDHASIATEIKV 93

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        + D+           L  S D      T +++  
Sbjct: 94  LDKIREETGKTKKDLTREEFLEKAWEWKDKYENRILSQLKKLGSSCDWTRTAFTMDEKRS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R ++  + +KG IYKG     +        +D EV       +      PV+  E
Sbjct: 154 KAVREVFVSLYEKGLIYKGNRIINWCPSCNTALSDAEVEHKEHKGHLWYIKYPVKGEE 211


>gi|220916675|ref|YP_002491979.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954529|gb|ACL64913.1| valyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 1051

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 136/362 (37%), Gaps = 40/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   ++ +  + ++ R+       +   E      +P +  N  +++++  + D  
Sbjct: 359 RCQRSATILEPLLSDQWYVRIEPLARPAIEAVEQGRTRFIPEQWTNTYMAWMR-NIHDWC 417

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I     P                           ++  W  +     +T
Sbjct: 418 ISRQ-LWWGHQIPAWYCPDGHVTVARQTPEACSTCGKGELRQDEDVLDTWFSSGLWPFST 476

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +  +  +  F+P  +   G DI+ F    +          +P             K
Sbjct: 477 MGWPEQTETLRT-FYPTSVMETGHDIIFFWVARMMMMGLHFMGEVPFRTVYLHPMVRDEK 535

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SK+ GNVIDP+ + ++ G DALR+ L    A G+D    K+ ++       AN + 
Sbjct: 536 GQKMSKTKGNVIDPLVITDQYGADALRFTLAALTAQGRDIKLAKERIEG--YRAFANKLW 593

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  SR   M L  Y      P     T +D  IL+   R + E  E +     + A   V
Sbjct: 594 N-ASRFALMNLSGYQERGEDPARLARTPADRWILARLQRAVNETVEALDAFRFNDAANAV 652

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + V     D Y +  K   L   +P+   +V  V V  ++    LL  F+P +  +++ 
Sbjct: 653 YAFVWHELCDWYIELAK-EALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWH 711

Query: 476 IL 477
           +L
Sbjct: 712 VL 713



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R    I           H+GHA    + DVL R+ R+ G + L+  GTD  G      
Sbjct: 45  RTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAGIATQMI 104

Query: 60  ------------------KAAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                             +A        K  +  +     + +   LD   + F  T ++
Sbjct: 105 VEKELKKTEKKSRHDLGREAFLERVWAWKEQYGSRIGEQHKALGASLDWQRERF--TMDE 162

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 R ++ ++ ++G IY+      +        +D EV  
Sbjct: 163 GLSRAVREVFVRLHEEGLIYREKKLINWCPDCRTALSDLEVEH 205


>gi|238924929|ref|YP_002938445.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876604|gb|ACR76311.1| valyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|291527316|emb|CBK92902.1| valyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 882

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 150/383 (39%), Gaps = 14/383 (3%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G   +   +    ++ + +   DE+ K A     N +   +     +  +F  +   
Sbjct: 342 HNVGVHDRCHTTVEPMIKQQWFVKMDEMIKPAVEGVKNGEIKLL-PSRMDKTYFNWTDNI 400

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                  +      +P    ++    V      +    K    G +        +  W  
Sbjct: 401 RDWCISRQLWWGHRIPAWYCDDCGEMV----VSIEKPGKCPKCGKEHWTQDPDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +  +      P    +F
Sbjct: 457 SALWPFSTLGWPEKTE-DLDYFYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVEASRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  SR + M L+  +   P       +D+ ILS  + + ++  ENM    + 
Sbjct: 576 --FANKVWN-ASRFIMMNLEGVELREPKLDELHAADKWILSRVNTLAKDATENMDKFELG 632

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A+ +V   + +   D Y +  K    KK  NP+ A+  L+    V+     LL  ++P 
Sbjct: 633 IAVQKVYDFIWDEFCDWYIEIAKVRTYKKDENPESANAALWTLKTVLVNALKLLHPYMPF 692

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +  +IF  L   +E        +
Sbjct: 693 ITEEIFCTLQSDEETIMLSKWPE 715



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 34  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEVK 93

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              A                        K +  +  +  R +    D   + F  T ++ 
Sbjct: 94  VIQALKEQGINKADLTREEFLEKCWDWRKEYGGRIVKQLRKLGSSADWQRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                + ++ K+  KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 152 CSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 211


>gi|315150958|gb|EFT94974.1| valyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 880

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/354 (20%), Positives = 132/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
             D  I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTDADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|291563752|emb|CBL42568.1| valyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 883

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 83/389 (21%), Positives = 148/389 (38%), Gaps = 37/389 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E       V    +   ++     V+ M +  +F ++       +   +S     +P  
Sbjct: 331 KEMGLLVKIVPHSHNVGTHDRCGTTVEPMVKPQWFVKMDEMAKPAIEALKSGKLRFVPES 390

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
                + +++ G++D  +SR+ +                             G       
Sbjct: 391 FGKTYLHWLE-GIRDWCISRQLWWGHRIPAYYCEECGEMTVAKMMPEKCPKCGCTHLKQD 449

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+    D     F+P D+ V G DI+ F    + +     + 
Sbjct: 450 EDTLDTWFSSALWPFSTLGWPKETD-EMKYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTG 508

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +        +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  + 
Sbjct: 509 ECPFNTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFY 568

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + ++   N   AN + N  SR + M ++            T +D+ ILS  + + +E+ 
Sbjct: 569 WERVEASRN--FANKVWN-ASRFIMMNIEKAPAGEAKLTDLTAADKWILSKVNDLAKEVT 625

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ENM    +  AL +V   V E   D Y +  KP      +  +A+ +      V+     
Sbjct: 626 ENMDKYELGIALQKVYDFVWEEFCDWYIEMVKPRLWNDEDRTKAAAIW-TLKTVLINSLK 684

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSL 489
           LL  F+P +  +IF  L   + +    S 
Sbjct: 685 LLHPFMPFITEEIFCNLQDEEPSIMISSW 713



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 37  EGKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +                       + D+           L  S  +D    T +    
Sbjct: 97  VIDKLKKEGINKNDLGREGFLKEAWKWKDEYGTRIIKQLHKLGSSADWDRERFTMDAGCS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +    ++ ++ +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 157 EAVLEVFTRLYEKGYIYKGSRIINWCPVCKTSISDAEVEHKEQDGFFWHINYPIVGEE 214


>gi|291525950|emb|CBK91537.1| valyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 882

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 150/383 (39%), Gaps = 14/383 (3%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G   +   +    ++ + +   DE+ K A     N +   +     +  +F  +   
Sbjct: 342 HNVGVHDRCHTTVEPMIKQQWFVKMDEMIKPAVEGVKNGEIKLL-PSRMDKTYFNWTDNI 400

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                  +      +P    ++    V      +    K    G +        +  W  
Sbjct: 401 RDWCISRQLWWGHRIPAWYCDDCGEMV----VSIEKPGKCPKCGKEHWTQDPDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +  +      P    +F
Sbjct: 457 SALWPFSTLGWPEKTE-DLDYFYPNDVLVTGYDIIFFWVIRMIFSGYEQMGKAPFHTVLF 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVEASRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  SR + M L+  +   P       +D+ ILS  + + ++  ENM    + 
Sbjct: 576 --FANKVWN-ASRFIMMNLEGVELREPKLDELHAADKWILSRVNTLAKDATENMDKFELG 632

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A+ +V   + +   D Y +  K    KK  NP+ A+  L+    V+     LL  ++P 
Sbjct: 633 IAVQKVYDFIWDEFCDWYIEIAKVRTYKKDENPESANAALWTLKTVLVNALKLLHPYMPF 692

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +  +IF  L   +E        +
Sbjct: 693 ITEEIFCTLQSDEETIMLSKWPE 715



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 34  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYNALWQPGTDHASIATEVK 93

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              A                        K +  +  +  R +    D   + F  T ++ 
Sbjct: 94  VIQALKEQGINKADLTREEFLEKCWDWRKEYGGRIVKQLRKLGSSADWQRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                + ++ K+  KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 152 CSHAVQEVFTKLYKKGWIYKGSRIVNWCPVCKTSISDAEVEHEEQDGFFWHINYPVVGEE 211


>gi|331269097|ref|YP_004395589.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125647|gb|AEB75592.1| valyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 879

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 83/383 (21%), Positives = 151/383 (39%), Gaps = 38/383 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE  Y         +   ++   + ++ M  E ++ ++    +  +          +P  
Sbjct: 329 DEQGYLVKIKDHAHNVGTHDRCGSTIEPMTSEQWYVKMKPLAEPAIKVVREGEIKFVPE- 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ------------------------ 225
           R ++        ++D  +SR+   WG  I +                             
Sbjct: 388 RFSKTYYNWMENIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVSTEDPTKCSKCGSEHLEQ 446

Query: 226 --YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
              ++  W  +     +T GY +  +     F+P +  V G DI+ F    + +      
Sbjct: 447 DKDVLDTWFSSALWPFSTLGYPEKTE-DLEYFYPTNTLVTGYDIIFFWVARMIFSGLHSM 505

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P    +        +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  Y
Sbjct: 506 KKIPFNTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIRY 565

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            ++ ++   N   AN I N     +  + KD          +T +D+ ILS  + V++E+
Sbjct: 566 YEEKVEAARN--FANKIWNASRFVMMNLDKDLMDKYKDSKEYTLADKWILSRINTVVKEV 623

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            EN++   +  A  +    +     D Y +  KP  L   +      VL V  EV+++  
Sbjct: 624 TENIEKFEVGIAAQKTYDFMWNEFCDWYIELVKP-VLYGEDEKAKGIVLNVLNEVLKKGL 682

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            LL   +P +  +I+  L  A+E
Sbjct: 683 KLLHPVMPFITEEIYTNLPNAEE 705



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +         Q H+GHA +  + D L R  R+ G   L+  G D         
Sbjct: 35  KTKKPYTVMMPPPNITGQLHLGHALDGTLQDFLIRTKRMQGYSTLWLPGEDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + +                      +  +     +     L IS  Y     T ++  +
Sbjct: 95  VEKSLLEQGLHKKEMGRDAFLEKVWDWAYKYRDRIKTQYQKLGISADYTRERFTMDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ ++ ++G IYKG     +  + +   +D E+       ++     PV   +E
Sbjct: 155 KAVRKVFVELYNEGLIYKGNRIVNWCPKCQTAISDAEIEYEEQNGHFWHIKYPVVGSDE 213


>gi|317129810|ref|YP_004096092.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474758|gb|ADU31361.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 880

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 73/408 (17%), Positives = 154/408 (37%), Gaps = 36/408 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L++E      E +  + G    +    V+      +F ++    
Sbjct: 314 YQGMDRFECRKQIVKDLQEEGILFKIEDHMHSVGHSERSGA-VVEPYLSTQWFVKMKPLA 372

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
           ++ +   +S  +     +R  +        ++D  +SR+   WG +I             
Sbjct: 373 EEAIKLQQSEGKVDFVPDRFEKTYLHWIENIRDWCISRQ-LWWGHRIPAWFHKETGELYV 431

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +  + ++  W  +     +T G+ +       +++  D+ V G DI+ F
Sbjct: 432 GRTAPEDIENWEQDEDVLDTWFSSALWPFSTMGWPNQEAPDFKRYYSTDVLVTGYDIIYF 491

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +        +G K+SKSLGN +DP++VI++ G DALR+F
Sbjct: 492 WVARMIFQGLHFTNERPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDVIDKYGADALRFF 551

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G+D  +  + ++   N +  N I N  SR   M ++          G  + +D
Sbjct: 552 LSTGSSPGQDLRFYWEKVES--NWNFGNKIWN-ASRFALMNMEGLKYEEIDLTGKKSIAD 608

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+     + ++ + +           + + + +   D Y +  K P  L   + +  
Sbjct: 609 KWILTRLQDTITQVTKLIDTYEFGEVGRALYNFIWDDFCDWYIEMAKLP--LNGDDEEAK 666

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            T   V   V+ Q   LL  F+P +  +++  L    E+    +   R
Sbjct: 667 LTTRSVLAYVLDQTMRLLHPFMPFITEEVWQYLPHEGESITVAAWPTR 714



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 37  ENKKPYTIVIPPPNVTGKLHLGHAWDTTLQDILIRVKRMQGYDALWLPGMDHAGIATQAK 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +S D      T ++   
Sbjct: 97  VEGKLREEGVSRYDLGREKFIEKSWEWKEEYAETIRQQWSKLGLSLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++ ++ ++G IY+G Y   +  + +   +D EV  
Sbjct: 157 DAVKEVFVRLYEEGLIYRGEYIINWDPQTKTALSDIEVIY 196


>gi|218678320|ref|ZP_03526217.1| methionyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 229

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 112/202 (55%), Positives = 159/202 (78%)

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           Y+++ +G +AK+WPAD+H+IGKDI+RFHA+YWPAFL+SA LPLPK+VF+HGF+L+KGEK+
Sbjct: 2   YIEDKNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVFAHGFLLNKGEKM 61

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP+ ++   G+D +RYF +RE++ G+DG Y ++ +  R+N+DLANGIGNL S
Sbjct: 62  SKSLGNVVDPVNLVNHFGLDQVRYFFLREVSFGQDGSYSEEAIGIRINSDLANGIGNLAS 121

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           RS+SMI+K+ DG IP  G  ++ D+++L+    +     E+M  Q IHRALA +I++VSE
Sbjct: 122 RSLSMIVKNCDGKIPECGPLSDEDKAMLAQADALHASTCEDMGKQQIHRALASIIAVVSE 181

Query: 424 VDRYFDAQKPWELKKTNPDRAS 445
            DRYF  Q PW LKKT+P+R  
Sbjct: 182 TDRYFAGQAPWALKKTDPERMG 203


>gi|295706762|ref|YP_003599837.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804421|gb|ADF41487.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 880

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 137/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK +   +   +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADKAVDLQKQEEKVNFVPDRFEKTYLHWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGEVYVDHETPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P ++ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTNVLVTGYDIIFFWVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVIE+ G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMEVIEKYGADSLRYFLSTGSSPGQDLRFSFEKVEATWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GITFEELDLSGGKSVADKWILTRLNETIEHVTKLADKYEFGEVGRILYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+     LL  F+P +  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDNTMRLLHPFMPFITEEIWQSLPHEGESITVA 709

Query: 488 SLDQ 491
              +
Sbjct: 710 KWPE 713



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 38  EKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAKV 97

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                T  + ++ +   R     L +  D      T ++    
Sbjct: 98  EEKLRSEGKSRYDLGRENFVAETWKWKEEYASFIRQQWSKLGLGLDYSRERFTLDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 158 AVREVFVTLYKKGLIYRGEYIINWDPATKTALSDIEVIY 196


>gi|225389238|ref|ZP_03758962.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme
           DSM 15981]
 gi|225044699|gb|EEG54945.1| hypothetical protein CLOSTASPAR_02984 [Clostridium asparagiforme
           DSM 15981]
          Length = 880

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 149/381 (39%), Gaps = 38/381 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M ++ +F ++       +   ++     +P       + ++
Sbjct: 336 VPHSHNVGTHDRCKTTVEPMVKQQWFVKMEEMAKPAIEALKTGELKFVPESFGKTYLHWL 395

Query: 201 KSGLKDLSLSRKTFDWGIKI----------------------------PDDPQYIMYVWI 232
           +  ++D  +SR+   WG +I                                +  +  W 
Sbjct: 396 E-NIRDWCISRQ-LWWGHRIPAYYCQDCGEIVVAKEAPCKCPKCGKTSFVQDEDTLDTWF 453

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +  +     F+P D+ V G DI+ F    + +     +   P    +
Sbjct: 454 SSALWPFSTLGWPEKTE-DLEYFYPTDVLVTGYDIILFWVIRMVFSGLEQTGKCPFHTVL 512

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   
Sbjct: 513 IHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLLTGNAPGNDMRFYWERVENSR 572

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N     +  I K  D    TP + T +D  ILS  + +  ++ EN+    +
Sbjct: 573 N--FANKVWNASRFIMMNIEKAPDVSGVTPDSLTMADRWILSKVNTLAGDVTENLDRYEL 630

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             AL +V   + E   D Y +  KP    + +  +A+ V      V+     LL  F+P 
Sbjct: 631 GIALQKVYDFIWEEFCDWYIEMVKPRLYNEDDATKAAAVW-TLKTVLINALKLLHPFMPF 689

Query: 469 LANKIFDILFVADENRCFQSL 489
           +  +IF  L   ++       
Sbjct: 690 ITEEIFCNLQEEEQTIMVSQW 710



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +                       +  +      +    +  S  +D    T ++   
Sbjct: 93  VIDKLKQEGIDKHDLGRDGFLEKCWEWKKEYGTRIVNQLHKMGSSADWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           D    ++ K+ +KG IYKG     +    +   +D EV        +   + PV
Sbjct: 153 DAVLEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVEQEGKFWHINYPV 206


>gi|164686738|ref|ZP_02210766.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
 gi|164604128|gb|EDQ97593.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
          Length = 889

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 90/413 (21%), Positives = 159/413 (38%), Gaps = 41/413 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L +E +      +  A G  Y   H  V+    E +F ++    
Sbjct: 313 YAGMDRYECRKELIKDLEEEGFLIKIVPHPHAVGTCYR-CHTVVEPRLSEQWFVKMDELA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   ++     +P              ++D  +SR+ +                   
Sbjct: 372 KPAIDILKNEELKFVPERYGTGTYLQWLENIRDWCISRQLWWGHQIPAYYCQECGEVVVA 431

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       + ++  W  +     +T G+  N +     ++P ++ V G D
Sbjct: 432 KEAPHKCEKCGCTEFKQDEDVLDTWFSSALWPFSTLGWPHNTE-ELEYYYPTNVLVTGYD 490

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F  +    A +   N    + V  HG +   +G K+SKSLGN I+P+EVI+E G DA
Sbjct: 491 IIFFWVVRMAFAGMFCMNETPFEHVLIHGLVRDSQGRKMSKSLGNGINPLEVIDEYGADA 550

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+ L+   + G D  +  + ++   N   AN + N  SR + M + D      T     
Sbjct: 551 LRFMLITGNSPGNDMRFYFERVEASRN--FANKLWN-ASRFIFMNIDDEIMNGVTRESVE 607

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             FT +D+ I+S  +RV +E+ ENM    +  A  +V         D Y +  KP  L  
Sbjct: 608 ANFTLADKWIISRANRVAKEVTENMDKFDLGIAATKVEDFAWSEFCDWYIEIVKP-RLYG 666

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            + +   T LYV   V+ ++  LL  ++P +  +I+  L   + +        
Sbjct: 667 EDKEAKQTALYVLTYVLEKILKLLHPYMPFITEEIYSCLPTVEGSIMVSEWPH 719



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + DVL R+ R+DG + L+  GTD          
Sbjct: 36  DKKPFCIVLPPPNITGQLHMGHALDHTLQDVLIRWKRMDGYEALWQPGTDHASIATEVKV 95

Query: 63  QNAGVTTK-----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                  +                  + D+  R   D    L  S  +D    T ++  +
Sbjct: 96  VEKIRKEEGKSKYELGREEFLKRAMDWKDEYGRVIVDQMKQLGSSCDWDRERFTMDQGCN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     + K+ +KG IY+G     +    +   +D EV  
Sbjct: 156 EAVTEFFVKLYEKGHIYRGNRIINWCPDCKTTLSDAEVEH 195


>gi|297242583|ref|ZP_06926522.1| methionyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889392|gb|EFH28125.1| methionyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 520

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 104/482 (21%), Positives = 182/482 (37%), Gaps = 80/482 (16%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEA-----YYNDDEVYKGADGQYYNAQH------- 154
           + ++++    G IYKG      S          Y        GADG   +          
Sbjct: 2   QEMFRQCLKNGYIYKGTQKVAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDACGNELD 61

Query: 155 -----NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLS 208
                NPV  +  E   F  + +    L          L         +     GL +  
Sbjct: 62  PDELINPVSKINGETPRFEETEHYFLDLPALAEANVNWLHSREGWRTNVINFSLGLFNEV 121

Query: 209 LSR---KTFDWGIKIP-----DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPA 258
             R   +  DWGI +P     D+P   +YVW DA+  YL+ +             + W  
Sbjct: 122 KPRAITRDIDWGIPVPVEGWIDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWC 181

Query: 259 D-----LHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           D      + +GKD + FH+  WP+ +L+ N              L +P++V +  F+  +
Sbjct: 182 DPKSPGYYFMGKDNITFHSQIWPSEMLAYNGAGSKGGEAGVYGPLNMPEQVVASEFMTME 241

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K S S G VI   +++    VDA+RY++        D  +      +  N +LA   G
Sbjct: 242 GKKFSSSRGIVIYVKDILARYPVDAVRYYISIAGPENSDADFTWAEFARHNNEELAASWG 301

Query: 360 NLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NLV+R  ++I K++  + P    + T  D ++L   S     +   ++      AL + +
Sbjct: 302 NLVNRVANLINKNFGVIPPLDEDSMTAMDRALLDQTSDAFALVGSLIERHRQKNALTEAM 361

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +V+++++Y  A +PW++ K +  R  TVL+V  + +     LL  F+P  A K+++ L 
Sbjct: 362 RVVADINKYISATEPWKI-KDDEARLGTVLHVAAQAVSDANHLLAPFLPHAAQKVWEALG 420

Query: 479 VADENRCFQSLD------------------------------QRLKPGFMLHKTFDPIFP 508
                     ++                              + L  G  + K   PIF 
Sbjct: 421 GTGVFSPLPHIEEVEDLDNPDFKYPIITGDYRLGETVHPWESEELVAGTPVPKP-SPIFA 479

Query: 509 RF 510
           + 
Sbjct: 480 KI 481


>gi|154503249|ref|ZP_02040309.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149]
 gi|153796243|gb|EDN78663.1| hypothetical protein RUMGNA_01073 [Ruminococcus gnavus ATCC 29149]
          Length = 882

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 100/494 (20%), Positives = 190/494 (38%), Gaps = 55/494 (11%)

Query: 36  RFHRLDGLDVLFT------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           R+  + G +VL            ++            +T     +      R   + ++I
Sbjct: 238 RYKDIVGKNVLLPLVNKEIPVVADYYVDKEFGTGAVKITPAHDPNDFEVGKRHNLEEINI 297

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             DD   T  ++                D Y+   +    L+++ Y  + E +    G  
Sbjct: 298 MNDD--ATINEKGGK---------YAGMDRYEARKAIVEDLKEQGYLVEIEPHSHNVGT- 345

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           ++     V+ + ++ +F ++       +   ++     +P  R N++       +KD  +
Sbjct: 346 HDRCGTTVEPLIKQQWFVKMEELAKPAIEALKTGELKFVPE-RFNKIYLHWLENIKDWCI 404

Query: 210 SRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTT 242
           SR+ +                             G       +  +  W  +     +T 
Sbjct: 405 SRQIWWGHRIPAYYCDECGDFVVAREMPETCPHCGCTHFTQDEDTLDTWFSSALWPFSTL 464

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+ D  +     F+P D+ V G DI+ F    + +  +  +   P    +        +G
Sbjct: 465 GWPDKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYEHTGKSPFHTVLIHGLVRDSQG 523

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN IDP+EVI++ G DALR  LV   A G D  +  + ++   N   AN + N
Sbjct: 524 RKMSKSLGNGIDPLEVIDQYGCDALRLTLVTGNAPGNDMRFYHERVESSRN--FANKVWN 581

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             SR + M +++     P      E+D+ ILS  +R+ +++ ENM    +  A+ +V   
Sbjct: 582 -ASRFIMMNMEENVVAEPDASLLNEADKWILSRVNRLAKDVTENMDKFELGIAVQKVYDF 640

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +   D Y +  K     K     A+  VL+V   V++Q   LL  F+P +  +I+ +L
Sbjct: 641 IWDEFCDWYVETAKYRIYHKEEEKAAADCVLWVLKTVLKQALKLLHPFMPFITEEIYSVL 700

Query: 478 FVADENRCFQSLDQ 491
              +E+       Q
Sbjct: 701 VPEEESLMMSEWPQ 714



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R +   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +    +    L IS  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKELGREGFLERTWQWKEEYAGTIENQLKKLGISCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ K+ +KG IYKG     +  + +   +D EV        +     P+
Sbjct: 153 SKAVEEVFIKLYEKGYIYKGSRIINWCPKCKTSLSDAEVEHEEQAGNFWHIKYPI 207


>gi|210617648|ref|ZP_03291679.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
 gi|210149195|gb|EEA80204.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
          Length = 923

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 90/410 (21%), Positives = 167/410 (40%), Gaps = 38/410 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L ++ Y    E +    G  ++  H  V+ + ++ +F ++    
Sbjct: 352 YAGMDRYEARKAIVADLEEQGYLVKIEDHTHNVGT-HDRCHTTVEPLIKQQWFVKMEELA 410

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              ++  ++     +P  R +++       ++D  +SR+ +                   
Sbjct: 411 KPAINALKTGELKFVPE-RFDKIYLHWLENIRDWCISRQIWWGHRIPAYYCDECGEFVVA 469

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ D+ +     F+P D+ V G D
Sbjct: 470 REMPEVCPHCGCTHFTQDEDTLDTWFSSALWPFSTLGWPDSTE-ELDYFYPTDVLVTGYD 528

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + + AF  +   P             +G K+SKSLGN IDP+EVIE+ G DA
Sbjct: 529 IIFFWVIRMVFSAFAHTGKSPFHTVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEQYGADA 588

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR  LV   A G D  +  + ++   N + AN + N  SR + M ++D     P  G  T
Sbjct: 589 LRMTLVTGNAPGNDMRFYDERVEA--NRNFANKVWN-ASRFILMNMEDKTITTPDLGELT 645

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
            +D+ ILS  + + +++ ENM    +  AL +V   + +   D Y +  K        + 
Sbjct: 646 PTDKWILSKVNTLAKDVTENMDKFELGIALQKVYDFIWDEFCDWYIELAKYRMYHADEDA 705

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             A+  L+    V+     LL  F+P ++ +I+  L   +E+    +  Q
Sbjct: 706 KAANATLWTLKTVLANGLKLLHPFMPFVSEEIYSALVPEEESLMMSTWPQ 755



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 75  RSKKPFTIVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTDHAAISTEVK 134

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                    T  + ++           L  S  +D    T ++   
Sbjct: 135 VTNQLKEEGIDKKELGREGFLKRTWEWKEEYGGTITQQLKKLGTSCDWDRERFTMDEGCS 194

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                ++ K+ ++G IYKG     +    +   +D EV       ++     P+
Sbjct: 195 KAVEEVFIKLYEEGYIYKGSRIINWCPVCKTSLSDAEVEHEEQAGHFWHIKYPI 248


>gi|257865153|ref|ZP_05644806.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257871477|ref|ZP_05651130.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799087|gb|EEV28139.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257805641|gb|EEV34463.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 881

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 137/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMEPLAKQAIDNQETDDAVDFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +I                          DP  ++  W  +     +T G+ D  +   
Sbjct: 414 GHQIPAWYHKETGEMYVGLEAPADAENWQQDPD-VLDTWFSSALWPFSTMGWPDETNEDF 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 QRYFPTNTLVTGYDIIAFWVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  + 
Sbjct: 533 IDPMEVIEQYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWNASRFVLMNVS 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +     I   G  + +D  IL+  +  ++++ +  +      A  Q+ + + +   D Y 
Sbjct: 591 EMTAEDIDFSGEKSVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   L   N         + V V+ Q+  LL   +P +  +I+  L    E+
Sbjct: 651 EMSK-ETLYGDNEAAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKLPHTGES 704



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    L +S D      T +    
Sbjct: 96  VEEKLREQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKLGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|197121883|ref|YP_002133834.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196171732|gb|ACG72705.1| valyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 1051

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 137/362 (37%), Gaps = 40/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   ++ +  + ++ R+       +   E      +P +  N  +++++  + D  
Sbjct: 359 RCQRSATILEPLLSDQWYVRIEPLARPAIEAVEQGRTRFIPEQWTNTYMAWMR-NIHDWC 417

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I     P                           ++  W  +     +T
Sbjct: 418 ISRQ-LWWGHQIPAWYCPDGHVTVARQTPEACSTCGKRELRQDEDVLDTWFSSGLWPFST 476

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +  +  +  F+P  +   G DI+ F    +          +P             K
Sbjct: 477 MGWPEQTETLRT-FYPTSVMETGHDIIFFWVARMMMMGLHFMGEVPFRTVYLHPMVRDEK 535

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SK+ GNVIDP+ + ++ G DALR+ L    A G+D    K+ ++       AN + 
Sbjct: 536 GQKMSKTKGNVIDPLVITDQYGADALRFTLAALTAQGRDIKLAKERIEG--YRAFANKLW 593

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  SR   M L  Y      P     T +D  IL+   R + E  E ++    + A   V
Sbjct: 594 N-ASRFALMNLSGYQERGEDPARLARTPADRWILARLQRAVNETVEALEAFRFNDAANAV 652

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + V     D Y +  K   L   +P+   +V  V V  ++    LL  F+P +  +++ 
Sbjct: 653 YAFVWHELCDWYIELSK-EALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWH 711

Query: 476 IL 477
           +L
Sbjct: 712 VL 713



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    I           H+GHA    + DVL R+ R+ G + L+  GTD  G      
Sbjct: 45  RTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAGIATQMI 104

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     + +  +     + +   LD   + F  T ++
Sbjct: 105 VEKELKKTERKSRHDLGREAFLERVWAWKEQYGSRIGEQHKALGASLDWQRERF--TMDE 162

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 R ++ ++ ++G IY+      +        +D EV  
Sbjct: 163 GLSRAVREVFVRLHEEGLIYREKKLINWCPDCRTALSDLEVEH 205


>gi|114567165|ref|YP_754319.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338100|gb|ABI68948.1| valyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 883

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 85/410 (20%), Positives = 156/410 (38%), Gaps = 39/410 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y         L  + Y    E ++ A G         ++ +    +F ++    
Sbjct: 313 YQGLDRYACRLQVVKDLEAQGYLLKVEEHRHAVGH-CQRCDTVIEPLVSTQWFVKMKPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +  +          +P       I++++  ++D  +SR+   WG +IP            
Sbjct: 372 EPAIQKVLDGEIKFIPERFTRIYINWME-NIRDWCISRQ-LWWGHRIPVWYCQECGEIIC 429

Query: 222 --DDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
             +DP +              ++  W  +     +T G+ D        F+P  + V G+
Sbjct: 430 SKEDPNHCPNCESAELKQDEDVLDTWFSSALWPFSTLGWPDKTR-DLDFFYPTTVLVTGR 488

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + +        +P          +  +G K+SKSL N IDPIEVIE+ G D
Sbjct: 489 DIIFFWVARMIFSGIEHMGEVPFYDVNIHGLILDAQGRKMSKSLNNGIDPIEVIEKFGAD 548

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR+ L+  +  G D  +  D ++   N   AN I N  SR V M ++ ++ + P     
Sbjct: 549 TLRFSLITGVTPGNDVRFHWDKVENTRN--FANKIWN-ASRFVLMNMEGFEAIKPGLEEL 605

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           + +D  ILS     + E+   +    +  A  ++   + +   D Y +  KP  + + NP
Sbjct: 606 SLADRWILSRLQLTIAEVTNLLDKYDLGEAARRLYEFIWDEFCDWYIELAKPRLVNQDNP 665

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                V  V  +V+  +  LL  F+P +  +I+  L             +
Sbjct: 666 RERLVVQNVLRDVLVDILRLLHPFMPFITEEIYQFLPAHSATIMLDPWPE 715



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I           H+GHA +  + D+L R+ R+ G + L+  GTD  G       
Sbjct: 37  EGKAFSIVMPPPNVTGSLHLGHALDNTLQDILTRWRRMQGYNALWLPGTDHAGIATQARV 96

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           + A                      +             ++  S D      T ++    
Sbjct: 97  EEALAREGLNKYELGREKFLERVWEWKHLYGNRITQQLSLMGSSCDWSRERFTMDEGCSR 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R ++  + +KG IY+G Y   +  R     +D EV       +      P++  +E
Sbjct: 157 AVREVFVNLYEKGLIYQGDYIINWCPRCHTAISDIEVEHEDSDGHLWHIRYPLEGEDE 214


>gi|291542091|emb|CBL15201.1| valyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 897

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 142/374 (37%), Gaps = 38/374 (10%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            D       H  ++ M  + +F +++      +          +P  R  +V       +
Sbjct: 365 HDVGTCYRCHTTIEPMVSKQWFVKMAPLAKPAIDVVRKGNTKFIPE-RFEKVYFHWMENI 423

Query: 205 KDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTN 237
           KD  +SR+ +                             G       +  +  W  +   
Sbjct: 424 KDWCISRQLWWGHRIPAWYCEECGEVMVAKDAPEKCCKCGSTHIHQDEDTLDTWFSSALW 483

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
             +T G+ D        F+P    V G DI+ F    + + A     + P          
Sbjct: 484 PFSTLGWPDKTP-ELEYFYPTSTLVTGYDIIFFWVARMIFSACENMGSAPFKTVFMHGIV 542

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G K+SKSLGN IDP+EVI++ G DALR+FL      G D  Y    ++    A+ A
Sbjct: 543 RDENGIKMSKSLGNGIDPLEVIDKYGADALRFFLATGNTPGNDMRYSDKRVEA--CANFA 600

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N + N  SR V M + D+D     P   T  D+ I+S  + V +E+ EN++   +  A+ 
Sbjct: 601 NKLWN-ASRYVHMNIDDHDVKNELPKTLTTEDKWIVSTLNTVAKEVNENLEKFELGIAVQ 659

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++   + +   D Y +  K      ++ + A     V + V+ Q+  LL  F+P +  +I
Sbjct: 660 KIYEFIWDCYCDWYIELVKTRL--SSDGEDAQNARQVLLYVLDQILRLLHPFMPYITEEI 717

Query: 474 FDILFVADENRCFQ 487
           +  +    E     
Sbjct: 718 WQTIPHEGETVMLA 731



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 34  KDKKPYTIVMPPPNITGQLHMGHALDETLQDILIRWRRMQGYSALWLPGTDHASIATEAK 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              A                      +              L  S D      T ++   
Sbjct: 94  IVEAMRKEGITKEDIGREEFLKRAWEWKKVYGGRITSQLKKLGSSCDWERERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              + ++ ++ + G IY+G     +        +D EV       ++  
Sbjct: 154 KAVKEVFVRLYNDGKIYRGNRMVNWCPHCCTSISDAEVEYKEQNGHFWH 202


>gi|227486662|ref|ZP_03916978.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235374|gb|EEI85389.1| valine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 878

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 78/366 (21%), Positives = 158/366 (43%), Gaps = 38/366 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++  +    +  Y S    ++P       +++++  ++D ++SR+   W
Sbjct: 349 IEPLISKQWFVKMDEFAKMCIDAYNSGELKLIPENLSKTYMNWLE-NIRDWTISRQ-LWW 406

Query: 217 GIKIP---------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           G ++P                              +  +  W  +      T G+ +  +
Sbjct: 407 GHRLPVFYTEDGEIIVSEDEPDEEGKLEGKKVTQEEDTLDTWFSSALWPFATLGWPEENE 466

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                F+P D+ + G DI+ F    + + +   +  +P    +F+      +G K+SKSL
Sbjct: 467 -EFDYFFPTDILITGYDIIFFWVIRMVFASLYTTGKVPFSHVLFTGLIRDSQGRKMSKSL 525

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DPI+V+ + G DALR+ L+   + G D  YD+D L    N   AN + N  SR V 
Sbjct: 526 GNGVDPIDVVNKYGADALRFTLITGNSPGNDMRYDEDRLLASRN--FANKLWN-ASRFVL 582

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           M + + D +       T  D+ IL   ++V++++ +N+    I  A  ++   +     D
Sbjct: 583 MNIDESDDLDFDGKNLTLEDKWILKRLNQVIEDVSKNLDKYEIGMAADRIEDFIWNEYCD 642

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   + D  + V  V + V++ + ILL  F+P +  +I+  L    +   
Sbjct: 643 WYIEFAK-IRLYGDDEDAKANVKKVLLYVLKSMLILLHPFMPFITEEIYSSLPNKKDMLI 701

Query: 486 FQSLDQ 491
            +   +
Sbjct: 702 VEEWPE 707



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 18/168 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA    + D++ R+ R+ G + L+  GTD          
Sbjct: 31  DKKPFTIVMPPPNVTGQLHLGHALNNTLQDIVIRYKRMAGFEALWIPGTDHASISTEAKV 90

Query: 63  QNAG----------------VTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  +     +     + +S  +D    T ++    
Sbjct: 91  VGKIAGEGKTKADLGRDGFLKEAWDWTHKYGGTIKKQLRTIGVSCDWDHDSFTMDENLTR 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++KK+ D G IY+G     +    E   +D EVY          
Sbjct: 151 AVKRVFKKMYDDGLIYRGDRIVNWDPMAETAISDAEVYHKDQKGKLWY 198


>gi|257874768|ref|ZP_05654421.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257808934|gb|EEV37754.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 881

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 137/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMEPLAKQAIDNQETDDAVDFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +I                          DP  ++  W  +     +T G+ D  +   
Sbjct: 414 GHQIPAWYHKETGEMYVGLEAPADAENWQQDPD-VLDTWFSSALWPFSTMGWPDETNEDF 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 QRYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  + 
Sbjct: 533 IDPMEVIEQYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWNASRFVLMNVS 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +     I   G  + +D  IL+  +  ++++ +  +      A  Q+ + + +   D Y 
Sbjct: 591 EMTAEDIDFSGEKSVADRWILTRLNETIEKVTDLFERFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   L   N         + V V+ Q+  LL   +P +  +I+  L    E+
Sbjct: 651 EMSK-ETLYGDNEAAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKLPHTGES 704



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEEKLREQGISRYDLGREKFVEQVWDWKEEYAGHIREQWAKIGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|83589396|ref|YP_429405.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83572310|gb|ABC18862.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 880

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 85/397 (21%), Positives = 155/397 (39%), Gaps = 42/397 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + + +    E +  A G  Y      ++ +    +F R++   +  +   +      +P 
Sbjct: 328 KAQGFLVKVEEHTHAVGHCYRCGTT-IEPLVSPQWFVRMAPLAEPAIQAAKEGRVRFVPE 386

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------- 221
                 +++++  ++D  +SR+   WG +IP                             
Sbjct: 387 RFTKIYLNWLE-NIRDWCISRQ-LWWGHRIPVWYCQQCGEEICSREDPEECPACGSTALE 444

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     +T G+ D     +A F+P  + V G+DI+ F    + +    
Sbjct: 445 QDPD-VLDTWFSSALWPFSTLGWPDRTPELEA-FYPTSVLVTGRDIIFFWVARMLFMGLE 502

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               +P  + +     +  +G K+SKSLGN +DP+EVIE+ G D LR  LV     G D 
Sbjct: 503 FMGEVPFREVLIHGLVLDAQGRKMSKSLGNGVDPMEVIEKYGADTLRLMLVTGNTPGNDL 562

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  + L+   N   AN I N  +R   M L+DY+         T +D  ILS  ++++ 
Sbjct: 563 RFHPERLEGTRN--FANKIWN-AARFALMNLEDYEPAPLERENLTLADRWILSRLNKLVL 619

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+   ++   I      +         D Y +  KP  L   N         V V V+ +
Sbjct: 620 EVNACLEAYEIGEVARMLYEFFWGEFCDWYIELIKP-RLYGENRRERQVAQEVLVTVLGK 678

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
              LL  F+P +  +I+  L     +    S  + + 
Sbjct: 679 SLQLLHPFMPFITEEIWQHLPGERGSIMLSSWPRPVP 715



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 57/173 (32%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I           H+GHA +  + D+L R+HR+ G   L+  GTD  G      
Sbjct: 34  KGQPAFSIVMPPPNVTGSLHLGHALDNTLQDILTRWHRMRGDATLWIPGTDHAGIATQAR 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  Q          +L  S D      T ++   
Sbjct: 94  VEEELAKEGLSKYDLGRDRFLERVWEWKHQYGDRITRQLRLLGSSCDWSRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
              R ++ ++ +KG IY+G Y   +  R     +D EV    +  +      P
Sbjct: 154 RAVREVFVRLYEKGLIYRGSYIINWCPRCRTTISDIEVEHIEEAGHLWYIRYP 206


>gi|23099516|ref|NP_692982.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746073|sp|Q8EPN2|SYV_OCEIH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22777745|dbj|BAC14017.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 883

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 138/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++       L    ++  +     +R           ++D  +SR+   
Sbjct: 359 VEPYLSTQWFVKMDPLAKSALDMQADADEKVNFVPDRFERTYFNWMDNIRDWCISRQ-LW 417

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                        +  + ++  W  +     +T G+ +      
Sbjct: 418 WGHRIPAWYHKETKEIYVGKEAPADIENWEQDEDVLDTWFSSALWPFSTMGWPNEDSADL 477

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P ++ V G DI+ F    + + +       P    +         G K+SKSLGN 
Sbjct: 478 KRYFPTNVLVTGYDIIFFWVSRMIFQSKEFMNEKPFEDTLLHGLIRDADGRKMSKSLGNG 537

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VIE+ G D+LRYFL+     G+D  +  + ++   N   AN + N  SR   M +
Sbjct: 538 VDPMDVIEKYGADSLRYFLMTGSTPGQDLRFHWEKVESTWN--FANKVWN-ASRFSIMNM 594

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           + +        G  +  D  IL+  +  ++++  N        A   + + + +   D Y
Sbjct: 595 EGFTYEDIDLTGELSLPDRWILARLNETIEQVTRNSNKYEFGEAGRHLYNFIWDEFCDWY 654

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +  K   L   + ++  T   V   V+ Q   +L  F+P +  +I+  L     +    
Sbjct: 655 IEMAK-LSLYGEDENKKKTTRSVLAHVLDQTMRMLHPFMPFITEEIWQQLPHEGPSITVS 713

Query: 488 SLDQ 491
              +
Sbjct: 714 KWPE 717



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I         + H+GHA++  + D + R  R+ G DVL+  G D  G       
Sbjct: 41  DKEPYSIVIPPPNVTGRLHLGHAWDTSMQDTITRMKRMQGYDVLWLPGMDHAGIATQAKV 100

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + ++ +   R   + L +  D      T ++   D
Sbjct: 101 EARLKESGTNRYELGREKFLEKAWEWKEEYAAFIRSQWEKLGLGLDYSRERFTLDEGLSD 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             R ++ K+ +KG IY+G Y   +    +   +D EV        +     P++  +E 
Sbjct: 161 AVREVFVKLYEKGLIYRGEYIINWDPSTKTALSDIEVIYEEIQGKFYHMRYPIKGSDET 219


>gi|168187608|ref|ZP_02622243.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294536|gb|EDS76669.1| valyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 879

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 82/372 (22%), Positives = 149/372 (40%), Gaps = 38/372 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++   + ++ M  E ++ ++    +  +          +P  R ++       
Sbjct: 340 HAHNVGTHDRCGSTLEPMTSEQWYVKMKPLAEPAIKVVREGEIKFVPE-RFSKTYYNWME 398

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDA 234
            ++D  +SR+   WG +IP              +DP                ++  W  +
Sbjct: 399 NIQDWCISRQ-LWWGHRIPVWYCKNCGEVIVSTEDPTKCPKCGSEHLEQDKDVLDTWFSS 457

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T GY +  +     F+P    V G DI+ F    + +        +P    +  
Sbjct: 458 ALWPFSTLGYPERTE-DLEYFYPTSTLVTGYDIIFFWVARMIFSGLHSMKKIPFDTVLIH 516

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  Y ++ ++   N 
Sbjct: 517 GIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIRYYEEKVEAARN- 575

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + KD          +T +D+ ILS  + V++E  EN+    +  
Sbjct: 576 -FANKIWNASRFVMMNLDKDLMEKYKDCKEYTLADKWILSRINTVVKEATENIDKFELGI 634

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   +     D Y +  KP  L   +      VL V  EV+++   LL   +P + 
Sbjct: 635 AAQKIYDFMWNEFCDWYIELVKP-ALYGDDEKAKGVVLNVLNEVLKKGLKLLHPVMPFIT 693

Query: 471 NKIFDILFVADE 482
            +I+  L   +E
Sbjct: 694 EEIYTNLPNTEE 705



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + DVL R  R+ G   L+  G D         
Sbjct: 35  KSKKPYTIMMPPPNITGQLHLGHALDGTLQDVLIRTKRMQGYSTLWLPGEDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + +                      +  +     +     L IS  Y     T ++  +
Sbjct: 95  VEKSLLEQGLHKKEMGREAFLEKVWDWAYKYRDRIKTQYQKLGISADYTRERFTMDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ ++ ++G IYKG     +  + +   +D E+       ++     PV   +E
Sbjct: 155 KAVRKVFVELYNEGLIYKGNRIVNWCPKCQTAISDAEIEYQEQNGHFWHIKYPVVGTDE 213


>gi|160939307|ref|ZP_02086658.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438270|gb|EDP16030.1| hypothetical protein CLOBOL_04201 [Clostridium bolteae ATCC
           BAA-613]
          Length = 879

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 149/380 (39%), Gaps = 36/380 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M ++ +F ++       +   ++     +P       + ++
Sbjct: 336 VPHSHNVGTHDRCKTTVEPMVKQQWFVKMEEMAKPAIEALKNGSLTFVPESFGKTYLHWL 395

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           + G++D  +SR+ +                             G       +  +  W  
Sbjct: 396 E-GIRDWCISRQLWWGHRIPAYYCQECGEIVVSKEAPHACPKCGCTSLKQDEDTLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +     +  LP    + 
Sbjct: 455 SALWPFSTLGWPEKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKLPFHTVLI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 514 HGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMTLITGNAPGNDMRFYWERVENSRN 573

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N     +  I K            T +D+ I+S  + + +E+ EN+    + 
Sbjct: 574 --FANKVWNASRFIMMNIEKAAQSGEVALDRLTMADKWIVSKVNTLTREVTENLDKYELG 631

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   + E   D Y +  KP    + +  +A+ +      V+ Q   LL  F+P +
Sbjct: 632 IALQKVYDFIWEEFCDWYIEMVKPRLYNEEDDTKAAAIW-TLKHVLIQALKLLHPFMPFI 690

Query: 470 ANKIFDILFVADENRCFQSL 489
           + +IF  L   +E       
Sbjct: 691 SEEIFCNLQEEEETIMISQW 710



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +                       + D+      +    L  S  +D    T +    
Sbjct: 93  VIDKLKKEGVDKADLGRDGFLKECWKWRDEYGTRIVNQLHKLGSSADWDRERFTMDHGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           D    ++ K+ +KG IYKG     +    +   +D EV       ++   + PV
Sbjct: 153 DAVLEVFVKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVEQNGFFWHINYPV 206


>gi|328957160|ref|YP_004374546.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673484|gb|AEB29530.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 881

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 136/356 (38%), Gaps = 35/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  ++    + +    +  +     ER           + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVNMAPLAKEAIESQGTEEKVNFVPERFENTYMRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHRIPAWYHKTSGELYVGMEAPEDNENWVQDPD-VLDTWFSSALWPFSTMGWPDEDSEDF 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    +         G K+SKSLGN 
Sbjct: 473 KRYFPTNTLVTGYDIIFFWVSRMMFQSLEFTGKRPFNNVLIHGLIRDTDGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VIE+ G DALR+FL    A G+D  +  D +    N    N I N  SR   M +
Sbjct: 533 IDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-ASRFTLMNM 589

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +++        G  T +D  IL+  +  ++++ +  +      A   +   + +   D Y
Sbjct: 590 ENFTVDQIDLTGEKTVADRWILTKLNETVEKVTDLFERFEFGEAGRHLYHFIWDDFCDWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   +     T   +   V+ Q   LL   +P +  +I++ +    E+
Sbjct: 650 IEMSK-EVLFGEDEKAKQTTRSILAYVLDQTLRLLHPIMPFVTEEIWENIPHEGES 704



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   +         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KTKEAYSVVIPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                    T   + ++ +   R+    + IS D      T +    
Sbjct: 96  VEAKLAEDGISRYDLGREKFIDTVWDWKEEYASVIREQWAKVGISVDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVTMYNKKLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|253575687|ref|ZP_04853023.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845025|gb|EES73037.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 891

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 138/372 (37%), Gaps = 38/372 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   +S        +R  ++       ++D  +SR+   W
Sbjct: 362 VEPYLSTQWFVKMKPLAEKAIEAQKSGNGVNFVPDRFEKIYLNWIENVRDWCVSRQ-LWW 420

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +     +T G+ D  
Sbjct: 421 GHRIPAWYCDETGEMVVARSEEEARAKLGRDDIRQDEDVLDTWFSSALWPFSTLGWPDED 480

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                +++P  +   G DI+ F    + + +   +  +P    +        +G K+SKS
Sbjct: 481 SADLKRYFPTSVLSTGYDIIYFWVARMIFTSLEFTGQVPFKDVLIHGLVRDSEGRKMSKS 540

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DPIEVIE+ G DA+RY L      G+D  +  + +++  N   AN I N  SR  
Sbjct: 541 LGNGVDPIEVIEKYGADAMRYMLSTSNTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 597

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+          G  + +D  IL   +   +EI   +           + + + +  
Sbjct: 598 LMNLEGVKYEDIDISGELSTADRWILHRMNETAKEITRLIDAYEFGETGRLLYNFIWDDL 657

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   +         V   V+ +   ++  F+P ++ +I+  L  + E 
Sbjct: 658 CDWYIEFAK-LSLYGEDAAAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHSGET 716

Query: 484 RCFQSLDQRLKP 495
               +  +    
Sbjct: 717 ITLAAWPEYDPA 728



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +   I           HIGHA ++ + D+L R  R+ G D L+  G D  G       
Sbjct: 44  DAKPYTIVIPPPNVTGMLHIGHALDLTLQDILTRTKRMQGYDALWLPGMDHAGIATQTRV 103

Query: 63  QN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    +V+  +          +  M   LD S + F  T ++  
Sbjct: 104 EQRLREQGVSRYDLGREKFLEQVWAWKDQYAGTIHEQWAKMGASLDYSRERF--TLDEGL 161

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ K+ +KG IY+G Y   +        +D EV  
Sbjct: 162 SQAVREVFVKLYEKGLIYRGKYIINWDPAARTALSDIEVEY 202


>gi|218290828|ref|ZP_03494897.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239186|gb|EED06387.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 881

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 140/379 (36%), Gaps = 39/379 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           R+E Y   +E    A G   +     V+    E +F R+       L          LP 
Sbjct: 329 REEGYLVKEETLDHAVGH-CDRCGTVVEPYLSEQWFVRMEPLARDALERARRGELRFLPD 387

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
            R  +V     + ++D  +SR+   WG +IP                             
Sbjct: 388 -RFMKVFEQWLTNVRDWCISRQ-LWWGHRIPAWYCASCGQVSVSRDDLDHCLHCGSADVK 445

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ ++     A+F+P  L V G DIL F    + +     
Sbjct: 446 QDEDVLDTWFSSALWPFSTMGWPEHTP-DLARFYPTSLLVTGYDILFFWVARMVFMGVHF 504

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  +P    +        KG+K+SKS GN IDP++VI++ G DALR+ L      G D  
Sbjct: 505 TGKMPFQTVLLHGLLRDAKGQKMSKSKGNGIDPMDVIDKYGADALRFMLASNTVLGNDLR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + ++   N    N + N     +  +   +        +   +D  IL      ++ 
Sbjct: 565 FSWEKVEGARN--FLNKLWNAARFVLMNVEDGFSPQPLEAQSLDLADRFILHRLGETIRR 622

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   ++   +  A   V     +   D Y +  K   L     ++      V + V+ ++
Sbjct: 623 VTSALEEYDVGEAARAVYEFTWDEFCDWYIEFAK-INLYGDREEKKRQTQSVLLTVLSRV 681

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  ++P +  +I+  L
Sbjct: 682 LALLHPYIPFVTEEIWQAL 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 23/176 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R    I           H+GHA +  + D+  RF R+ G   L+  GTD  G        
Sbjct: 36  RGTFSIVMPPPNVTGVLHLGHALDTTLQDIATRFRRMQGYSTLWVPGTDHAGIATQARVE 95

Query: 60  ----------------KAAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +A        K  +    +   R +    D S + F  T +   
Sbjct: 96  QALREEEGKSRYDLGREAFVKRVWAWKEQYGGTITSQIRSLGASCDWSRERF--TMDPGL 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               R ++ ++ ++G IY+G     +  R     +D EV    +         P++
Sbjct: 154 SRAVREVFVRLYEEGLIYRGNRIINWCPRCRTALSDIEVEHVEEPGVLYHVRYPLE 209


>gi|167523457|ref|XP_001746065.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775336|gb|EDQ88960.1| predicted protein [Monosiga brevicollis MX1]
          Length = 445

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 130/445 (29%), Positives = 208/445 (46%), Gaps = 61/445 (13%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV--YKGADG---QYYNAQHNPVQWMEEEGYFF 167
           + ++G IYKG Y+GWY   DEAY    ++    G DG   +  +   +PV+ +EEE Y F
Sbjct: 1   MLERGYIYKGSYAGWYCRSDEAYLTSTQIEDRIGPDGTLVKVSSESGHPVELVEEENYMF 60

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQ 225
           +L A     +  +      I P  R+ E+++ + S L DLS+SR      WGI +P DP+
Sbjct: 61  KLGAL-VPDVRRWVETSNVIWPPNRKAEILNMLDSKLPDLSISRPRRKLQWGIPVPHDPE 119

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
             +YVW+DALTNYLT  G+      +        LHVIGKDI++FH +YWPAFLL+A L 
Sbjct: 120 QTIYVWVDALTNYLTAQGFPTQGAPTHPM-----LHVIGKDIVKFHCVYWPAFLLAAGLE 174

Query: 286 LPKKVFSHGFILHKGEK---------------------------ISKSLGNVIDPIEVIE 318
           LP++V  HG     G K                           +SKSLGNV+DP+++++
Sbjct: 175 LPQQVLVHGHWTMDGRKYSLRPPLVCPALQPTALPIHAIVALDPMSKSLGNVVDPVQLLD 234

Query: 319 EVG--VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DY 373
           +     D +RY+L++E     DG +    L   V  +LA+ +GNL+SR  +  +    ++
Sbjct: 235 QADGVPDLVRYYLLKESRLDTDGDFSYRRL-NAVTKELADTVGNLLSRISNQRVNSALEF 293

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G+           + ++++ S V +E+R           +  ++ L    +   +  +P
Sbjct: 294 PGLSVDDAPPPSPCQELITLGSSVAEEVRACYDRHDFGAGIEALLPLARRCNALINELEP 353

Query: 434 WELKKTNPDRASTVLYVTV----EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           W+L + +   A   L   +    E +R  A LL    P L+  +   L   +++      
Sbjct: 354 WKLARDDSPAAQATLKSLLGGAFESLRVTAALLYPVTPALSLALIHRLGCDEQDL----- 408

Query: 490 DQRLKPGFMLHKTF-----DPIFPR 509
            Q L P              P+ PR
Sbjct: 409 -QCLTPAVPTTARELRVDKQPLIPR 432


>gi|172058142|ref|YP_001814602.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990663|gb|ACB61585.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 878

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 134/365 (36%), Gaps = 35/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K L   +   +     +R           ++D  +SR+   W
Sbjct: 354 VEPYLSLQWFVKMEPLAEKALQEQQGEDKINFIPQRFENTYVRWMENIRDWCVSRQ-LWW 412

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ +       
Sbjct: 413 GHRIPAWYHKETGEVYVGKEAPADLENWEQDNDVLDTWFSSALWPFSTMGWPNEGAADYQ 472

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           K++P    V G DI+ F    + + ++  +   P    +        +G K+SKSLGN I
Sbjct: 473 KYFPTSTLVTGYDIIAFWVSRMIFQSYEFTGERPFNDVLIHGLIRDSEGRKMSKSLGNGI 532

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G D+LR+FL      G D  +  + ++   N   +N + N  SR   M + 
Sbjct: 533 DPMDVIEKYGADSLRWFLTTGSTPGNDLRFYWEKIEATWN--FSNKLWN-ASRFALMNMD 589

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  + ++           A   +   + E   + Y 
Sbjct: 590 RLTHEQIDLSGEKSLADQWILTRLNTTIDDVTRLSDKYEFGEAGRVLYHFIWEDFCNWYI 649

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +    + Q+  L+  F+P +  +I+  L    E     
Sbjct: 650 EMAKLP--LNGEDEAAKLTTRSILAYTLDQIMRLMHPFMPFITEEIWQHLPHEGETVTRA 707

Query: 488 SLDQR 492
           +   R
Sbjct: 708 AWPTR 712



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 36  EKAPYTIVIPPPNVTGKLHLGHAWDTTLQDMLTRMKRMQGFDVLYLPGMDHAGIATQAKV 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + ++ +   R+    L +  D      T ++   +
Sbjct: 96  EQKLRAEGKSRLEMGREKFLEQSWAWKEEYASTIREQWSKLGLGLDYSRERFTLDEGLSE 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 156 AVQEVFVKLYEKGLIYRGEYIVNWDPATKTAISDIEVIY 194


>gi|313903077|ref|ZP_07836471.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466579|gb|EFR62099.1| valyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 929

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/396 (20%), Positives = 146/396 (36%), Gaps = 65/396 (16%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +          ++ +    +F R+    +  +    S    I+P  R   V     
Sbjct: 350 PHRHNVGVCYRCGTVIEPLISRQWFVRMKPLAEPAMEAVRSGRTRIVPE-RFTRVYLHWL 408

Query: 202 SGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWID 233
             ++D  +SR+   WG +IP                               + ++  W  
Sbjct: 409 ENIRDWCISRQ-IWWGHRIPAWYCRQCGETVVAREDPDRCPRCGSDALHQDEDVLDTWFS 467

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D       +F+P  + V G DIL F    +         ++P    + 
Sbjct: 468 SALWPFSTLGWPDADSPDLRRFYPTSVLVTGYDILFFWVARMMVMGLEFMGDVPFRTVLL 527

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G+K+SKS GNV+DP+EVI++ G DALR+ LV  +A G D  +  +  +   N
Sbjct: 528 HGLVRDAQGQKMSKSRGNVVDPLEVIDKYGADALRFTLVTGLAPGNDARFSWERAEASRN 587

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  +R V M L+D+D     P     +D  IL+    V  +++  ++   + 
Sbjct: 588 --FANKLWN-AARFVLMNLQDFDPSRGEPRRENAADRWILARLEAVTADVQRLLEAFELG 644

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELK-------------------------KTNPDRA 444
            A   + + + +   D Y +  KP                             + +P  A
Sbjct: 645 EAARALYNFIWDEFCDWYIELVKPRLAAPAATGAEVAAAQDAAVQPEAPAGAGEGDPGAA 704

Query: 445 S---TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           S      Y   +V+ Q   LL  F+P ++  I+  L
Sbjct: 705 SSRYAAQYTLWQVLEQTLRLLHPFMPFISEAIWQKL 740



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 19/151 (12%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-------- 63
                    HIGHA    + D+LAR+HR+ G   L+  GTD  G       +        
Sbjct: 54  PPPNVTGNLHIGHALNNTMQDILARWHRMQGDVTLWVPGTDHAGIATQHVVEVRLAREEG 113

Query: 64  -------NAGVTTKVFVDQNSRNFRDMAD----VLDISYDDFIRTTEKRHHDTCRILWKK 112
                        +V+  +N      +         + +D    T ++      R ++ +
Sbjct: 114 LRRQDLGRERFLERVWAWKNQYEANILGQLRRLGASVDWDRVRFTMDEGCSRAVREVFVR 173

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +KG IY+G Y   +         D EV  
Sbjct: 174 LYEKGLIYRGDYMVNWCPECHTALADIEVEH 204


>gi|116872981|ref|YP_849762.1| valyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741859|emb|CAK20983.1| valyl-tRNA synthetase, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 882

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 137/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 357 VEPYLSLQWFVKMEPLASEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 415

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 416 GHRIPAWYHKETGEIYVGEKEPENSSEWEQDEDVLDTWFSSALWPFSTMGWPDTENQDFQ 475

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 476 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 536 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVESTWN--FINKIWN-ASRFVLMNLN 592

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D           +E SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 593 DMKYSEIDLTKVSEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 652

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   + D   T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 653 EIAKIP--LYGEDEDAKQTTRSVLAYTLNTTMRLLHPFMPFVTEEIWQNLPHEGESITIA 710

Query: 488 SLDQ 491
              +
Sbjct: 711 EWPK 714



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 98  VEAKLKENNISRYDLGREKFIDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDDGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 158 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 197


>gi|325660697|ref|ZP_08149326.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085577|ref|ZP_08334661.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325473004|gb|EGC76213.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330407464|gb|EGG86966.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 882

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/381 (21%), Positives = 155/381 (40%), Gaps = 37/381 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   +      V+ + ++ +F R+       +    +    ++P  R N+      S
Sbjct: 339 HSHNVGTHERCGTTVEPLVKQQWFVRMEELAKPAIEAISNGDLKLIPE-RMNKTYMNWLS 397

Query: 203 GLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDAL 235
            ++D  +SR+ +                             G       +  +  W  + 
Sbjct: 398 NIRDWCVSRQIWWGHRIPAYYCQECGKVVVAREMPEVCPDCGCTHFVQDEDTLDTWFSSA 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +T G+ +  +     F+P D+ V G DI+ F    + +  +  +   P    +F  
Sbjct: 458 LWPFSTLGWPEKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYAYTGKAPFHTVLFHG 516

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN IDP+E+IE+ G DALR  LV   A G D  +  + ++   N +
Sbjct: 517 LIRDSQGRKMSKSLGNGIDPLEIIEKYGADALRITLVTGNAPGNDMRFYDERVEA--NRN 574

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            AN + N  SR + M ++  +  +P     +  D+ I+S  + + +++ ENM    +  A
Sbjct: 575 FANKVWN-ASRFILMNMEGKEITVPNESDLSAVDQWIISKMNTLTKDVTENMDKFELGIA 633

Query: 414 LAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + +V   + +   D Y +  K      + NP  A++ LY    V+     LL  F+P + 
Sbjct: 634 VQKVYDFIWDEFCDWYIELAKYRIYHAEENPAAANSALYTLKTVLGDALKLLHPFMPFVT 693

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L   +E+    S  +
Sbjct: 694 EEIYGALVPEEESLMMSSWPE 714



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +T +  PN   + H+GHA++  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSKKPFTTVMPPPNITGKLHMGHAFDNTLQDILIRYKRMQGYNALWIPGTDHAAIATEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
                                   T  + D+ +         L +S  +D    T ++  
Sbjct: 93  KVTEQLKAEGIDKKELGREKFLERTWQWKDEYAGTIEGQLKKLGVSCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ K+ ++G IYKG     +    +   +D EV       ++     P+
Sbjct: 153 SKAVEEVFIKLYEEGYIYKGSRIVNWCPVCKTALSDAEVDHEEQAGHFWHIKYPI 207


>gi|261405376|ref|YP_003241617.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281839|gb|ACX63810.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 889

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 133/368 (36%), Gaps = 38/368 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   +S        +R           ++D  +SR+   W
Sbjct: 360 VEPYLSTQWFVKMQPLAEAAVDAQKSGKGVNFVPDRFERTYLHWMENVRDWCISRQ-LWW 418

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +     +T G+ D  
Sbjct: 419 GHRIPAWYSESTGEVVVAMNEEEARAKLGKDDLRQDEDVLDTWFSSALWPFSTMGWPDLD 478

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                +++P  + V G DI+ F    + +     +  +P    +        +G K+SKS
Sbjct: 479 SEDFKRYYPTSVLVTGYDIIPFWVSRMIFQGLEFTGQMPFKDTLIHGLVRDSEGRKMSKS 538

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+EVIE+ G DA+RY +      G+D  +  + +++  N   AN I N  SR  
Sbjct: 539 LGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 595

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+ +        G    +D  IL   +   ++I   +           + + + +  
Sbjct: 596 LMNLEGFTAADIDISGELGTADRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDL 655

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   +         V   V+ +   L+  F+P ++ +I+  L    E 
Sbjct: 656 CDWYIEFAK-LSLYGEDQAAKKKTQSVLAYVLDRTMRLIHPFMPFISEEIWQHLPHEGET 714

Query: 484 RCFQSLDQ 491
               S   
Sbjct: 715 VMLASWPT 722



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           + E   I           HIGHA +  + D+L R  R+ G D L+  G+D  G     K+
Sbjct: 42  DAEPYTIVIPPPNVTGMLHIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKV 101

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +  +  GVT               + D  +   RD    + +S D      T ++   +
Sbjct: 102 EQKLREEGVTRYDLGREKFLEKVWEWKDLYANTIRDQWSKIGLSLDYSRERFTLDEGLSE 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+ DKG IY+G     +        +D EV  
Sbjct: 162 AVREVFVKLYDKGLIYRGKRIINWDPAARTALSDIEVEY 200


>gi|253681583|ref|ZP_04862380.1| valine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561295|gb|EES90747.1| valine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 879

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/383 (21%), Positives = 150/383 (39%), Gaps = 38/383 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE  Y         +   ++   + ++ M  E ++ ++    +  +          +P  
Sbjct: 329 DEQGYLVKIKDHAHNVGTHDRCGSTIEPMTSEQWYVKMKPLAEPAIKVVREGEIKFVPE- 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ------------------------ 225
           R ++        ++D  +SR+   WG  I +                             
Sbjct: 388 RFSKTYYNWMENIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVSTEDPTKCSKCGSEHLEQ 446

Query: 226 --YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
              ++  W  +     +T GY +  +     F+P +  V G DI+ F    + +      
Sbjct: 447 DKDVLDTWFSSALWPFSTLGYPEKTE-DLEYFYPTNTLVTGYDIIFFWVARMIFSGLHSM 505

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P    +        +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  Y
Sbjct: 506 KKIPFNTVLIHGIVRDSQGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIRY 565

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            ++ ++   N   AN I N     +  + KD          +T +D+ ILS  + V++E+
Sbjct: 566 YEEKVEAARN--FANKIWNASRFVMMNLDKDLMDKYKDSKEYTLADKWILSRINTVVKEV 623

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            EN+    +  A  +    +     D Y +  KP  L   +      VL V  EV+++  
Sbjct: 624 TENIDKFEVGIAAQKTYDFMWNEFCDWYIELVKP-VLYGEDEKAKGIVLNVLNEVLKKGL 682

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            LL   +P +  +I+  L  A+E
Sbjct: 683 KLLHPVMPFITEEIYTNLPNAEE 705



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D L R  R+ G   L+  G D         
Sbjct: 35  KTKKPYTIMMPPPNITGQLHLGHALDGTLQDFLIRTKRMQGYSTLWLPGEDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + +                      +  +     +     L IS  Y     T ++  +
Sbjct: 95  VEKSLLEQGLHKKEMGREAFLEKVWDWAYKYRDRIKTQYQKLGISADYTRERFTMDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  + ++G IYKG     +  + +   +D E+       ++     PV   +E
Sbjct: 155 KAVRKVFVDLYNEGLIYKGNRIVNWCPKCQTAISDAEIEYEEQNGHFWHIKYPVVDSDE 213


>gi|283796427|ref|ZP_06345580.1| valine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075837|gb|EFE13201.1| valine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091426|emb|CBK77533.1| valyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 883

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/401 (19%), Positives = 154/401 (38%), Gaps = 17/401 (4%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQ 158
             ++  + + + + ++G + K           +      E            +     V+
Sbjct: 318 DRYEARKAMVEDLKEQGLLVKTVPHSHNVGTHDRCKTTVEPMVKPQWFVKMDEMAKPAVE 377

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV----ISFVKSGLKDLS--LSRK 212
            ++     F   ++    L + E   ++ +  +             + G   ++  +  K
Sbjct: 378 ALKSGRLKFVPESFGKTYLHWLEGIRDWCISRQLWWGHRIPAYYCDECGEMTVAKKMPEK 437

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G       +  +  W  +     +T G+ ++       F+P D+ V G DI+ F  
Sbjct: 438 CPKCGCTHLTQDEDTLDTWFSSALWPFSTLGWPESTP-EYEYFYPTDVLVTGYDIIFFWV 496

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +     +   P    +        +G K+SKSLGN IDP+EVI++ G DALR  L+
Sbjct: 497 IRMVFSGLEQTGKEPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLM 556

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G D  +  + ++   N   AN + N  SR + M ++     + +    T +D  I
Sbjct: 557 TGNAPGNDMRFYWERVEASRN--FANKVWN-ASRFIMMNIEKAPKALASLSELTMADRWI 613

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS  + + +++ ENM    +  AL +V   + E   D Y +  KP      +  +A+ + 
Sbjct: 614 LSKVNTLAKDVTENMDKYELGIALQKVYDFIWEEFCDWYIEMVKPRLYSDEDTTKAAAIW 673

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                V+ Q   LL  ++P +  +IF  L   + +    S 
Sbjct: 674 -TLKTVLIQSLKLLHPYMPFITEEIFCNLQDEEPSIMISSW 713



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 37  EGKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +   +                   + ++           L  S  +D    T ++   
Sbjct: 97  VIDKLKSEGIDKHDLGREGFLEKAWEWKEEYGNRIVKQLHKLGSSADWDRERFTMDEGCS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           D    ++ K+ +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 157 DAVLEVFTKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEEQDGFFWHINYPIVGEE 214


>gi|299144490|ref|ZP_07037569.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517578|gb|EFI41318.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 883

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 149/412 (36%), Gaps = 39/412 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y          +    +  +E +  A G         ++ M  + +F ++    
Sbjct: 311 YNGMDRYAARKQIIEDFKALNLFAGEEHHHNAVGH-CERCKTIIEPMISKQWFVKMEPLA 369

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
              L  Y       +P  R  +V       +KD  +SR+   WG ++             
Sbjct: 370 KPALQAYYDGKLNFVPE-RFAKVYVNWLENIKDWCISRQ-LWWGHRLPVFYCVETGEVVV 427

Query: 221 ---------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              +  +  W  +     +T G+ +  +  K  F+P D+ V G 
Sbjct: 428 SRTDPTGSPGYENKTFKQDEDTLDTWFSSALWPFSTLGWPEQTEDLK-YFYPTDVLVTGY 486

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + + A      +P     F+      +G K+SKSLGN IDP+E+I+  G D
Sbjct: 487 DIIFFWVIRMVFSALEDMGEVPFKDVFFTGLVRDSQGRKMSKSLGNGIDPLEIIDNYGAD 546

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ L+     G D  +  + ++   N + AN + N     +  +  +         + 
Sbjct: 547 ALRFTLISGNTPGNDMRFYNERVEA--NRNFANKLWNATRFVLMNLDDEKSEYKLNIDSL 604

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
              D+ ILS    ++ ++   +    +  A  ++   +     D Y +  KP  L   + 
Sbjct: 605 KNEDKWILSKLQNLIADVTIKLDKYDMGLAAQEIYDFIWSDYCDWYIEMVKP-RLYGEDN 663

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
               +   V + V++ +  LL  F+P +  +I+  L   +         + +
Sbjct: 664 KYKESAKAVLLYVLKDILKLLHPFMPYITEEIWQHLPGTETALIVSKWPKEV 715



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA    I D+L R  R+ G   L+  GTD         
Sbjct: 33  SSKKPFTIVMPPPNVTGNLHMGHALNNTIQDILIRTKRMQGYSALWLPGTDHASISTEAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                 +                   + D+   N ++    L +S D      T +    
Sbjct: 93  VVEKIKSDGKSKDELGREKFLEEAWKWTDKYGGNIKNQLKKLGVSCDWSRERFTLDDMLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++ ++ +KG IY+G     +        +D EV       +      P++
Sbjct: 153 HAVEEVFIRLYEKGLIYRGDRIINWCPNCRTAISDAEVEHEESDGHIWHFRYPLE 207


>gi|302386726|ref|YP_003822548.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197354|gb|ADL04925.1| valyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 879

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 154/403 (38%), Gaps = 17/403 (4%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQ 158
             ++  + + K + + G + K           +      E            +     ++
Sbjct: 315 ERYEARKAMVKDLEELGLLVKVAPHTHAVGTHDRCKTTVEPMVKQQWFVKMEEMAKPAIE 374

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV----ISFVKSGLKDLSLSRKTF 214
            ++ E   F    +    L + E+  ++ +  +             + G   +S    T 
Sbjct: 375 ALKTEKLKFVPERFDKIYLHWLENIRDWCISRQLWWGHRIPAYYCDQCGEIIVSKEVPTV 434

Query: 215 --DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G       +  +  W  +     +T G+ +  +     F+P D+ V G DI+ F  
Sbjct: 435 CPKCGGTHLTQDEDTLDTWFSSALWPFSTLGWPEKTE-DLEYFYPTDVLVTGYDIIFFWV 493

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +     +  LP    +        +G K+SKSLGN IDP+EVIE+ G DALR  L+
Sbjct: 494 IRMVFSGIEQTGKLPFHTVLIHGLVRDSEGRKMSKSLGNGIDPLEVIEKYGADALRMTLI 553

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G D  +  + ++   N   AN + N  SR + M ++            T +D+ I
Sbjct: 554 TGNAPGNDMRFYWERVEASRN--FANKVWN-ASRFIMMNIEKAPDAKAELKELTIADKWI 610

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS  + + +++ EN+    +  AL +V   + E   D Y +  KP      +  +A+ + 
Sbjct: 611 LSKANTLAKDVTENLDKYELGIALQKVYDFIWEEFCDWYIEMVKPRLWDDEDKTKAAAIW 670

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                V+     LL  ++P L  +IF  L   +E+    S  +
Sbjct: 671 -TLKTVLINSLKLLHPYMPFLTEEIFCNLQEEEESIMISSWPE 712



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
              +                      +  +      +    +  S  +D    T ++   
Sbjct: 93  VIESLKKQGIDKEELGRDGFLEKCWDWRKEYGGRIINQLHKMGSSADWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +  + ++ ++ +KG IYKG     +    +   +D EV       ++     P+   E
Sbjct: 153 EAVQEVFIRLYEKGYIYKGSRIVNWCPVCQTSISDAEVEHEDQNGFFWHIKYPIAGEE 210


>gi|260437219|ref|ZP_05791035.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810532|gb|EFF69737.1| valine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 877

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/367 (21%), Positives = 144/367 (39%), Gaps = 38/367 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +       H  V+    + +F ++       +   +S     +P         +++
Sbjct: 337 PHDHNVGTCYRCHTTVEPRVSKQWFVKMEELAGPAIEAVKSGKTRFVPEHFDKTYYHWLE 396

Query: 202 SGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDA 234
             +KD  +SR+ +                             G ++  DP   +  W  +
Sbjct: 397 -NIKDWCISRQLWWGHRIPAFYCDCCNEVVVTKENKAVCPKCGKEMRQDPD-TLDTWFSS 454

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +     F+P    V G DI+ F    + +     +   P    +  
Sbjct: 455 ALWPFSTLGWPDKTE-ELDYFYPTSTLVTGYDIIFFWVIRMMFSGIEHTGKAPFNTILIH 513

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N 
Sbjct: 514 GLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN- 572

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN + N  SR + M L   +         T++D+ ILS  + + +++ +NM+N  +  
Sbjct: 573 -FANKVWN-ASRFIMMNLDKAEVRDVDVTELTDADKWILSKVNTLAKDVTDNMENYDLGV 630

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ ++   + E   D Y +  KP  L   +    +  LY    V+     LL  ++P + 
Sbjct: 631 AVQKIYDFIWEEFCDWYIEMVKP-RLWNDDDTTKAAALYTLKTVLINSLKLLHPYMPFIT 689

Query: 471 NKIFDIL 477
            +IF  L
Sbjct: 690 EEIFCNL 696



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 54/174 (31%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L RF R+ G   L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRFKRMQGYSALWVPGTDHASIATEAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     +  +           +  S  +D    T ++  +
Sbjct: 93  VVEKIAKEGLTKESLGREKFLDRVWDWKKEYGGRIVKQLKKIGSSADWDRERFTMDEGCN 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++  + +KG IY+G     +        +D EV        +     P+
Sbjct: 153 KAVKEVFVNLYNKGLIYRGERIINWCPCCLTSISDAEVEYEDQAGSFWHLRYPL 206


>gi|239637538|ref|ZP_04678510.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596756|gb|EEQ79281.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 876

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 143/369 (38%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRALDNQKTDDRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHNETGEVYVGENAPEDIENWTQDEDVLDTWFSSALWPFSTLGWPDVDAEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYFPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    A G+D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSAPGQDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D++       G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFNVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   + D+  T   V   V+ ++  +L  F+P +  KI+  L    E     
Sbjct: 648 EMSKIP--MNGEDEDQKQTTRSVLSYVLDRIMRMLHPFMPFVTEKIWQSLPHEGETIVQA 705

Query: 485 CFQSLDQRL 493
            + ++D+ L
Sbjct: 706 SWPTVDKEL 714



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  TNKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +     + +  +   LD S + F  T +  
Sbjct: 92  VEAKLNEQGISRHDIGREKFLEQAWDWKEEYASFIRKQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPQARTALSDIEVIH 191


>gi|297584302|ref|YP_003700082.1| valyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142759|gb|ADH99516.1| valyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 879

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 137/365 (37%), Gaps = 35/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ +   +   +     ER  +        ++D  +SR+   W
Sbjct: 355 VEPYLSTQWFVKMGPLAEQAIELQKGEDKVHFVPERFEKTYLHWIENIRDWCISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ +       
Sbjct: 414 GHRIPAWFHKETGELYVGRTAPEDAENWEQDEDVLDTWFSSALWPFSTMGWPNEEAEDFN 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D  V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 474 RYYPTDALVTGYDIIYFWVARMIFQGQHFTERRPFKDVLIHGLVRDSEGRKMSKSLGNGV 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL      G D  +  + ++   N +  N I N  SR   M + 
Sbjct: 534 DPMDVIDKYGADALRFFLSTGSTPGNDLRFFWEKVEA--NWNFGNKIWN-ASRFALMNIG 590

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D         G  T +DE IL+     +    + +           + + + +   D Y 
Sbjct: 591 DMTYEEIDITGRKTIADEWILTRLHDTIAHTTKFIDAYEFGEVGRALYNFIWDDFCDWYI 650

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   + ++  T   V   V+ +   LL  F+P +  +++  L    ++    
Sbjct: 651 EMAKLP--LNGDDEEQKKTTRSVLAYVLDRTMRLLHPFMPFITEEVWQHLPHEGDSISIA 708

Query: 488 SLDQR 492
              + 
Sbjct: 709 PWPEA 713



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KNKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILIRVKRMQGYDALWLPGMDHAGIATQAK 95

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R     + +S D      T +    
Sbjct: 96  VEGKLREEGVSRHDLGREKFLEQSWAWKEEYAGFIRSQWAKMGLSLDYSKERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  + ++ ++ ++G IY+G Y   +    +   +D EV  
Sbjct: 156 EAVKEVFVRLYEEGLIYRGEYIINWDPDTKTALSDIEVIY 195


>gi|302389257|ref|YP_003825078.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199885|gb|ADL07455.1| valyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 882

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 85/375 (22%), Positives = 145/375 (38%), Gaps = 41/375 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
               H  V+ M  + +F R+    +  +   +      +P       I++++  + D  +
Sbjct: 347 CYRCHTVVEPMVSKQWFVRMKPLAEPAIEVVKQGRVKFVPDRFTKIYINWLE-NIHDWCI 405

Query: 210 SRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTNYLT 240
           SR+   WG +IP                              DP  ++  W  +     +
Sbjct: 406 SRQ-LWWGHRIPAWYCQDCGETIVARETPVKCSKCGGSSLEQDPD-VLDTWFSSALWPFS 463

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ D+ +  +  F+P    V G DI+ F    + + A       P      +      
Sbjct: 464 TLGWPDDTEDLR-YFYPTSALVTGYDIIFFWVARMIFMAMEFMKEEPFEYVAITGLVRDA 522

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EVIE+ G D LR+ L      G D  +  +  K   + + AN I
Sbjct: 523 QGRKMSKSLGNGIDPLEVIEKYGADTLRFALCTGNTPGNDIRFSWE--KAEHSRNFANKI 580

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR V M L+ ++   P     +  D  ILS  + V  E+ E +    +  A  +V 
Sbjct: 581 WN-ASRFVMMNLEGFEPGEPELENLSLKDRWILSRLNDVTSEVTEFLDKFEVGIAAQKVY 639

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K  +L   + +       V   V+ ++  LL  FVP +  +I+  
Sbjct: 640 DFFWSEFCDWYIEMAK-IDLYGDDENAKKRTQRVLYTVLERVLRLLHPFVPFITEEIWQH 698

Query: 477 LFVADENRCFQSLDQ 491
           L    E+    +  +
Sbjct: 699 LPHEGESIMVSAWPE 713



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E   I           HIGHA    I D+L R+ R+ G   L+  GTD  G       
Sbjct: 36  EKEPFTIVIPPPNVTGHLHIGHALNNTIQDILIRYKRMQGYPTLWLPGTDHAGIATEAKV 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + ++      +    L  S D   F  T ++    
Sbjct: 96  KEQLAEEGLSKYDLGREKFLERVWAWKEKYGDTIVNQLKKLGASCDWSRFRFTLDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G Y   +    +   +D EV  
Sbjct: 156 AVREVFVRLYEKGLIYRGDYIVNWCPTCKTTLSDIEVEH 194


>gi|147677147|ref|YP_001211362.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273244|dbj|BAF58993.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 886

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 165/420 (39%), Gaps = 53/420 (12%)

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           D   R +E+                 D Y+        L    Y    E +  A G  Y 
Sbjct: 302 DREGRMSEEAGPR---------YQGLDRYECRKKIVRDLEAGGYLLKTEDHVHAVGHCYR 352

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
             +  ++ M  + +F R+    +  +   +      +P  R  ++       ++D  +SR
Sbjct: 353 -CNTVIEPMLSKQWFVRMKPLAEPAIEAVKEGRIRFIPE-RFAKIYLNWMENIRDWCISR 410

Query: 212 KTFDWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTT 242
           +   WG +IP                              DP  ++  W  +     +T 
Sbjct: 411 Q-LWWGHRIPVWYCGDCGEMTVSKKAVTHCAKCGSAEVEQDPD-VLDTWFSSALWPFSTL 468

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK- 299
           G+        A ++P  + V G+DI+ F    + +       ++P  ++VF HG +L   
Sbjct: 469 GWPKKTL-DLAYYYPNSVLVTGRDIIFFWVARMIFSGLAFMNDVPF-REVFIHGLVLDAL 526

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN +DPI+VIE  G D+LR+ L+     G D  +  + L    N   AN + 
Sbjct: 527 GRKMSKSLGNGVDPIDVIESHGADSLRFMLITGNTPGNDLRFHFERLDGARN--FANKLW 584

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V M L+D+D     PG ++ +D  I+S     +  +   ++   +  A   +  
Sbjct: 585 N-ASRFVLMNLEDFDPEG-RPGPYSLADRWIISRLQAAIAGVSRYLEAYELGEAARVLYD 642

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     D Y +  KP    KT P+   T  +V   V++    LL  F+P +  +I+  L
Sbjct: 643 FIWSEFCDWYIELAKPRLYGKTTPEDRYTAQHVLSSVLKCTLELLHPFMPFITEEIWQHL 702



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD  G       
Sbjct: 38  EQEPFCIVMPPPNVTGQLHMGHALDNTLQDILTRWKRMKGYNTLWLPGTDHAGIATQARV 97

Query: 63  QN-------------------AGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                         K  + ++ +   R +    D   + F  T ++  
Sbjct: 98  EEQLAKEGLSRHDLGREEFLKRVWAWKEKYGNRITTQLRRLGASCDWQRERF--TMDEGC 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +    ++ K+  +G IY+  Y   +  +     +D EV  
Sbjct: 156 SEAVLEVFIKLFQRGLIYRDYYITNWCPKCHTTISDIEVEH 196


>gi|118443167|ref|YP_877806.1| valyl-tRNA synthetase [Clostridium novyi NT]
 gi|118133623|gb|ABK60667.1| valyl-tRNA synthetase [Clostridium novyi NT]
          Length = 879

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 150/383 (39%), Gaps = 38/383 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DEA +         +   ++   + ++ M  E ++ ++    +  +          +P  
Sbjct: 329 DEAGFLVKIKEHAHNVGTHDRCGSTLEPMTSEQWYVKMKPLAEPAIKVVREGEIKFVPE- 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ------------------------ 225
           R ++        ++D  +SR+   WG  I +                             
Sbjct: 388 RFSKTYYNWMENIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVSTEDPTKCPKCGSEHLEQ 446

Query: 226 --YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
              ++  W  +     +T GY +  +     F+P +  V G DI+ F    + +      
Sbjct: 447 DKDVLDTWFSSALWPFSTLGYPEKTE-DLEYFYPTNTLVTGYDIIFFWVARMIFSGLHSM 505

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P    +        +G K+SKSLGN +DP+EVIE+ G DALR+ L+   A G D  Y
Sbjct: 506 KKIPFNTVLIHGIVRDSEGRKMSKSLGNGVDPLEVIEKYGADALRFMLITGNAPGNDIRY 565

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            ++ ++   N   AN I N     +  + KD          +T +D+ ILS  + V++E 
Sbjct: 566 YEEKVEAARN--FANKIWNASRFVMMNLDKDLMEKYKDCKEYTLADKWILSRINTVVKEA 623

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            EN+    +  A  ++   +     D Y +  KP  L   +      VL V  EV+++  
Sbjct: 624 TENIDKFELGIAAQKIYDFMWNEFCDWYIELVKP-ALYGDDEKAKGVVLNVLNEVLKKGL 682

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            LL   +P +  +I+  L   +E
Sbjct: 683 KLLHPVMPFITEEIYTNLPNTEE 705



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D L R  R+ G   L+  G D         
Sbjct: 35  KTKKPYTIMMPPPNITGQLHLGHALDGTLQDFLIRTKRMQGYSTLWLPGEDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            + +                      +  +     +     L IS  Y     T ++  +
Sbjct: 95  VEKSLLEQGLHKKEMGREAFLEKVWDWAYKYRDRIKTQYQKLGISADYTRERFTMDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ ++ ++G IYKG     +  + +   +D E+       ++     PV   +E
Sbjct: 155 KAVRKVFVELYNEGLIYKGNRIVNWCPKCQTAISDAEIEYEEQNGHFWHIKYPVVGSDE 213


>gi|163813949|ref|ZP_02205343.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
 gi|158450819|gb|EDP27814.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
          Length = 920

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 151/382 (39%), Gaps = 37/382 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F R+       L   ++     +P +     I ++
Sbjct: 377 VPHSHNVGTHDRCKTTVEPMIKPQWFVRMKEMGQAALDIIKTDELSFVPEQFDKTYIHWL 436

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           +  ++D  +SR+ +                             G       +  +  W  
Sbjct: 437 E-NIRDWCISRQLWWGHRIPAWYCDECGETIVSRETPTVCPKCGCTHLTQDEDTLDTWFS 495

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D        F+P  + V G DI+ F    + + A   +   P    + 
Sbjct: 496 SALWPFSTLGWPDKTP-EYEYFYPTSVLVTGYDIIFFWVIRMVFSALEQTGKSPFKHVLI 554

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 555 HGLVRDDQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN 614

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N  +R + M ++  D         T +D  ILS  + + +E+ +NM+   + 
Sbjct: 615 --FANKIWN-ATRFIMMNMEKADFSAVKLSDLTIADRWILSKVNTLAKEMTDNMEKFELG 671

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A+++V   + E   D Y +  KP  L     +  +  L+    V+ Q   LL  ++P +
Sbjct: 672 IAVSKVYDFIWEEFCDWYIEMVKP-RLYNDEDETKAAALWTLKTVLIQALKLLHPYMPFI 730

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +IF  +   +E+       +
Sbjct: 731 TEEIFCNIQDEEESIMISKWPE 752



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L RF R+ G   L+  GTD         
Sbjct: 73  RSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDHAAIATEVK 132

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++           +  S  +D    T ++   
Sbjct: 133 VTEKLKEQGIDKKEIGREEFLKHAWAWKEEYGNRIVSQLKKMGSSADWDRERFTMDEGCS 192

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++ DKG IYKG     +    +   +D EV       Y+   + PV
Sbjct: 193 RAVKEVFVRLYDKGYIYKGSRIINWCPVCKTSISDAEVIHEEQDGYFWHINYPV 246


>gi|315641423|ref|ZP_07896496.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
 gi|315482810|gb|EFU73333.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
          Length = 898

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 130/359 (36%), Gaps = 31/359 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 373 VEPRLSTQWFVKMQPLAKQAMDNQETEDAVEFFPPRFNQTFMRWMENVHDWVISRQ-LWW 431

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 432 GHRIPAWYHNETGEVYVGMTEPSDPENWHQDNDVLDTWFSSALWPFSTMGWPDTDSADFK 491

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 492 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTDRRPFKNVLMHGLIRDEQGRKMSKSLGNGI 551

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +     
Sbjct: 552 DPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWNASRFVLMNCEG 609

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                +   G  + +D  IL+  +  + ++ +         A  Q+ + + +   D Y +
Sbjct: 610 MTAAELQINGEKSVADRWILARLNETVAKVTDLFDRFEFGEAGRQLYNFIWDDFCDWYIE 669

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             K   L   N     T   V V V+ Q   LL   +P +  +I+  L     +    S
Sbjct: 670 MSK-ETLYGENEAAKQTNKAVLVYVLDQSLRLLHPIMPFVTEEIWSKLPYEGTSLVVAS 727



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       + 
Sbjct: 57  KPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEE 116

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + ++ + + R+    L +S D      T ++   +  
Sbjct: 117 KLREQGISRYDLGREKFVDQVWEWKEEYAGHIREQWSKLGLSLDYSRERFTLDEGLSEAV 176

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 177 RKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 213


>gi|258511798|ref|YP_003185232.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478524|gb|ACV58843.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 881

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 140/379 (36%), Gaps = 39/379 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           R+E Y   +E    A G   +     V+    E +F R+       L          LP 
Sbjct: 329 REEGYLVKEEPLDHAVGH-CDRCGTVVEPYLSEQWFVRMEPLARDALERARRGELQFLP- 386

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
            R  +V     + ++D  +SR+   WG +IP                             
Sbjct: 387 GRFMKVFEQWLTNVRDWCISRQ-LWWGHRIPAWYCASCGQVSVSRDDLDHCLHCGSADVK 445

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ ++     A+F+P  L V G DIL F    + +     
Sbjct: 446 QDEDVLDTWFSSALWPFSTMGWPEHTP-DLARFYPTSLLVTGYDILFFWVARMVFMGVHF 504

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  +P    +        KG+K+SKS GN IDP++VI++ G DALR+ L      G D  
Sbjct: 505 TGKMPFQTVLLHGLLRDAKGQKMSKSKGNGIDPMDVIDKYGADALRFMLASNTVLGNDLR 564

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  + ++   N    N + N     +  +   +        +   +D  IL      ++ 
Sbjct: 565 FSWEKVEGARN--FLNKLWNAARFVLMNVEDGFSPQPLEAQSLDLADRFILHRLGETIRR 622

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   ++   +  A   V     +   D Y +  K   L     ++      V + V+ ++
Sbjct: 623 VTSALEEYDVGEAARAVYEFTWDEFCDWYIEFAK-INLYGDREEKKRQTQSVLLTVLSRV 681

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  ++P +  +I+  L
Sbjct: 682 LALLHPYIPFVTEEIWQAL 700



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 23/176 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R    I           H+GHA +  + D+  RF R+ G   L+  GTD  G        
Sbjct: 36  RGTFSIVMPPPNVTGVLHLGHALDTTLQDIATRFRRMQGYSTLWVPGTDHAGIATQARVE 95

Query: 60  ----------------KAAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +A        K  +    +   R +    D S + F  T +   
Sbjct: 96  QALREEEGKSRYDLGREAFVKRVWAWKEQYGGTITSQIRSLGASCDWSRERF--TMDPGL 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               R ++ ++ ++G IY+G     +  R     +D EV    +         P++
Sbjct: 154 SRAVREVFVRLYEEGLIYRGNRIINWCPRCRTALSDIEVEHVEEQGVLYHVRYPLE 209


>gi|225026786|ref|ZP_03715978.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
 gi|224955905|gb|EEG37114.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
          Length = 880

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/389 (20%), Positives = 159/389 (40%), Gaps = 37/389 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           +E  Y         +   ++  H  V+ M ++ +F +++      +   ++     +P  
Sbjct: 328 EEGGYLVRIENHEHNVGTHDRCHTTVEPMVKKQWFVKMNEMAKPAIEAVKNGDLRFVPGH 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
                + +++  ++D  +SR+ +                             G       
Sbjct: 388 FDRTYLHWLE-NIRDWCISRQLWWGHRIPAYYCDDCGEIVVAKETPSVCPKCGCTHFTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+ D  +     F+P ++ V G DI+ F    + +  +  + 
Sbjct: 447 EDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTNVLVTGYDIIFFWVIRMVFSGYEQTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +        +G K+SKSLGN IDP+E+I++ G DALR  LV   A G D  Y 
Sbjct: 506 KCPFSDVLIHGLVRDEQGRKMSKSLGNGIDPLEIIDQYGADALRLTLVTGNAPGNDMRYS 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           +  +    N   AN + N  SR + M ++  D    +    T +D+ ILS  + +++E+ 
Sbjct: 566 EKKIIASRN--FANKVWN-ASRFMLMNIEKADLSNVSLDDLTPADKWILSKANSLVKEVT 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +NM+N     A++++   + E   D Y +  KP    + +  +A+ +     +V+     
Sbjct: 623 DNMENYDFGVAVSKLNDFIWEEFCDWYIEMVKPRLYNEEDTTKAAALF-TLKKVLTISLK 681

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSL 489
           LL  ++P +  +IF  L   +E+      
Sbjct: 682 LLHPYMPFITEEIFCSLQDEEESIMVSDW 710



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 18/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 34  RSKKPFTIVMPPPNITGQLHMGHALDNTLQDILIRFKRMQGYNALWQPGTDHASIATEVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                    T  + ++           L  S  +D    T ++   
Sbjct: 94  VTNKLREEGIDKEELGREGFLKRTWEWREEYGGRIVSQLKKLGSSADWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              + ++ ++ +KG IY+G     +    +   +D EV       ++   + P+   ++ 
Sbjct: 154 KAVQEVFIRLYEKGYIYQGSRIINWCPVCQTSISDAEVEYEDQAGHFWHINYPIVGTDKC 213


>gi|160933630|ref|ZP_02081018.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
 gi|156867507|gb|EDO60879.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
          Length = 874

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/399 (21%), Positives = 151/399 (37%), Gaps = 40/399 (10%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G   +          DE  Y         +          V+    + +F ++      
Sbjct: 312 QGMTREEARKAIVKDLDEGGYLVKVEPIKHNVGSCYRCGTVVEPRVSKQWFVKMEPLAKP 371

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            +         ++P  R  ++       +KD  +SR+   WG +IP              
Sbjct: 372 AIDVVREGKIRLIPE-RMEKIYYNWMENIKDWCISRQ-LWWGHRIPAWYCEDCGETIVAK 429

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                            +  +  W  +     +T G+ +      + F+P D  V G DI
Sbjct: 430 ETPEKCPKCGGSHLHQDEDTLDTWFSSALWPFSTLGWPEKTP-ELSYFYPTDTLVTGYDI 488

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + +       ++P     F       +G K+SKSLGN IDPIEVIE+ G DAL
Sbjct: 489 IFFWVARMIFSGLEHMGDIPFKTVFFHGLVRDAQGRKMSKSLGNGIDPIEVIEKYGADAL 548

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ LV   + G D  + ++ L+   N   AN I N  +R + M +  +D     P + T 
Sbjct: 549 RFTLVTGNSPGNDMRFTEEKLESSRN--FANKIWN-AARFIHMNIDGFDVKNELPESLTL 605

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
            D+ I+S  + V +E+ EN++   +  A+ ++   + +   D Y +  K   + K     
Sbjct: 606 EDQWIVSALNTVTKEVTENLEKYELGIAVQKLYDFIWDQFCDWYIELAKTRLMAKDETSV 665

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +    V V     +  L+  F+P +  +I+  +    E
Sbjct: 666 GA--RQVLVWTFTSILKLMHPFMPYITEEIWQTMPHEGE 702



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++   I         Q H+GHA +  I D+L RF R+ G   L+  GTD          
Sbjct: 35  EKKPYTIVIPPPNITGQLHMGHALDETIQDILIRFKRMQGYSALWLPGTDHASIATEAKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      +  +      +    L  S D      T ++   +
Sbjct: 95  VEAMKKEGLTKEDVGREGFLERAWDWKAKFGGRIVEQLKKLGSSCDWERERFTLDEGCSE 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ +KG IY+G     +    +   +D EV        +     P+
Sbjct: 155 AVKEVFVRLYEKGLIYRGERIINWCPHCKTSISDAEVEFDEHDGNFWHLRYPL 207


>gi|255659387|ref|ZP_05404796.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848348|gb|EEX68355.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 892

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/387 (21%), Positives = 152/387 (39%), Gaps = 50/387 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +  H+ ++ +  + +F ++       +   +      +P  R  +        ++D  
Sbjct: 352 HCSRCHSTIEPLVSKQWFVKMEGLAKPAIEAVKDGRIQFVPE-RFTKTYINWLENIRDWC 410

Query: 209 LSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           +SR+ +                             G       + ++  W  +      T
Sbjct: 411 ISRQLWWGHRIPAWYCDDCGATSVSRTDLTKCPHCGSHHIHQDEDVLDTWFSSGLWPFET 470

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--- 298
            G+ D       +F+P    V G DI+ F    W A ++   L   K +  H   +H   
Sbjct: 471 FGWPDKTP-ELEQFYPTATLVTGYDIIFF----WVARMVMMGLEFGKDIPFHHVFIHGLV 525

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN IDP+EVIE+ G D LR+ L+     G D  +  + ++   N   A
Sbjct: 526 RDSQGRKMSKSLGNGIDPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARN--FA 583

Query: 356 NGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N I N  SR + M  + +D    P    FT +D+ ILS  ++  + + +++ N  +  A 
Sbjct: 584 NKIWN-ASRYMLMNFEGFDKSFKPEAADFTLADKWILSRYAKTAEGVTKSLDNFELGEAG 642

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  K     K N    +T LYV   V+     LL  F+P L  +
Sbjct: 643 RMIYEFIWNEFCDWYIELTKARLYDKENERAKNTALYVLSYVLEHTLRLLHPFMPFLTEE 702

Query: 473 IFDILFVADENRC-----FQSLDQRLK 494
           I+  +    + +      + + D+ L+
Sbjct: 703 IWQKVPHDAQWKSIMIADWPTADEALR 729



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +         Q H+GHA +  + D+L R+HR+ G + ++  G D  G      
Sbjct: 40  KSKKPYSMVIPPPNVTGQLHMGHALDNTLQDILIRYHRMQGYNTVWIPGCDHAGIATQAK 99

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
            + A                      + ++           L   + +D    T ++   
Sbjct: 100 VEGALRKEGTNRYELGREKFLERVWDWKEKFGSRIMFQLRSLGSSLDWDRERFTMDEGCS 159

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + +KG IY+G     +        +D EV    +  +       V+
Sbjct: 160 RAVREVFVSLYEKGLIYQGTRITNWCPSCNTAISDIEVEHETEQGHLWHLRYEVE 214


>gi|329928481|ref|ZP_08282349.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937740|gb|EGG34148.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 889

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 133/368 (36%), Gaps = 38/368 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  +   +S        +R           ++D  +SR+   W
Sbjct: 360 VEPYLSTQWFVKMQPLAEAAVDAQKSGKGVNFVPDRFERTYLHWMENVRDWCISRQ-LWW 418

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +     +T G+ D  
Sbjct: 419 GHRIPAWYSESTGEVVVAMNEEEARAKLGKDDLRQDEDVLDTWFSSALWPFSTMGWPDLD 478

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                +++P  + V G DI+ F    + +     +  +P    +        +G K+SKS
Sbjct: 479 SEDFKRYYPTSVLVTGYDIIPFWVSRMIFQGLEFTGQMPFKDTLIHGLVRDSEGRKMSKS 538

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+EVIE+ G DA+RY +      G+D  +  + +++  N   AN I N  SR  
Sbjct: 539 LGNGIDPLEVIEQYGADAMRYMISTGSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 595

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+ +        G    +D  IL   +   ++I   +           + + + +  
Sbjct: 596 LMNLEGFTVADIDISGELGTADRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDL 655

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   +         V   V+ +   L+  F+P ++ +I+  L    E 
Sbjct: 656 CDWYIEFAK-LSLYGEDQTAKKKTQSVLAYVLDRTMRLIHPFMPFISEEIWQHLPHEGET 714

Query: 484 RCFQSLDQ 491
               S   
Sbjct: 715 VMLASWPT 722



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           + E   I           HIGHA +  + D+L R  R+ G D L+  G+D  G     K+
Sbjct: 42  DAEPYTIVIPPPNVTGMLHIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKV 101

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +  +  GVT               + D  +   RD    + +S D      T ++   +
Sbjct: 102 EQKLREEGVTRYDLGREKFLEKVWEWKDLYANTIRDQWSKIGLSLDYSRERFTLDEGLSE 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+ DKG IY+G     +        +D EV  
Sbjct: 162 AVREVFVKLYDKGLIYRGKRIINWDPAARTALSDIEVEY 200


>gi|295094145|emb|CBK83236.1| valyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 880

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 151/382 (39%), Gaps = 37/382 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F R+       L   ++     +P +     I ++
Sbjct: 337 VPHSHNVGTHDRCKTTVEPMIKPQWFVRMKEMGQAALDIIKTDELSFVPEQFDKTYIHWL 396

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           +  ++D  +SR+ +                             G       +  +  W  
Sbjct: 397 E-NIRDWCISRQLWWGHRIPAWYCDECGETIVSRETPTVCPKCGCTHLTQDEDTLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D        F+P  + V G DI+ F    + + A   +   P    + 
Sbjct: 456 SALWPFSTLGWPDKTP-EYEYFYPTSVLVTGYDIIFFWVIRMVFSALEQTGKSPFKHVLI 514

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 515 HGLVRDDQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN 574

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N  +R + M ++  D         T +D  ILS  + + +E+ +NM+   + 
Sbjct: 575 --FANKIWN-ATRFIMMNMEKADFSDVKLSDLTIADRWILSKVNTLAKEMTDNMEKFELG 631

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A+++V   + E   D Y +  KP  L     +  +  L+    V+ Q   LL  ++P +
Sbjct: 632 IAVSKVYDFIWEEFCDWYIEMVKP-RLYNDEDETKAAALWTLKTVLIQALKLLHPYMPFI 690

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +IF  +   +E+       +
Sbjct: 691 TEEIFCNIQDEEESIMISKWPE 712



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L RF R+ G   L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDHAAIATEVK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++           +  S  +D    T ++   
Sbjct: 93  VTEKLKEQGIDKKEIGREEFLKHAWAWKEEYGNRIVSQLKKMGSSADWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++ +KG IYKG     +    +   +D EV       ++   + PV
Sbjct: 153 KAVKEVFVRLYEKGYIYKGSRIINWCPVCKTSISDAEVIHEEQDGFFWHINYPV 206


>gi|315148803|gb|EFT92819.1| valyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 880

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   ++         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQKTEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|257083370|ref|ZP_05577731.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256991400|gb|EEU78702.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315171826|gb|EFU15843.1| valyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327536084|gb|AEA94918.1| valine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 880

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   ++         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQKTEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|293382180|ref|ZP_06628123.1| valine--tRNA ligase [Enterococcus faecalis R712]
 gi|291080463|gb|EFE17827.1| valine--tRNA ligase [Enterococcus faecalis R712]
          Length = 880

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDSSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|256618285|ref|ZP_05475131.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597812|gb|EEU16988.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|315032301|gb|EFT44233.1| valyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315145977|gb|EFT89993.1| valyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 880

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|227499878|ref|ZP_03929971.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217987|gb|EEI83260.1| valine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 879

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 38/366 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++  +    +  Y+     ++P    ++      + ++D ++SR+ +  
Sbjct: 349 IEPLISKQWFVKMDDFAKMCIEAYDKGEVKLIPDS-LSKTYMNWLNNIRDWTISRQLWWG 407

Query: 217 ---------------------------GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
                                      GI +  D    +  W  +      T G+ +  +
Sbjct: 408 HRLPVFYTDDGEVIVSEDEPDENGMLNGIHVTQDED-TLDTWFSSALWPFATLGWPNENE 466

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                F+P D+ V G DI+ F    + + +   +  +P    +F+      +G K+SKSL
Sbjct: 467 -EYDYFFPTDILVTGYDIIFFWVIRMIFSSVYNTGEVPFSHVLFTGLIRDSQGRKMSKSL 525

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DPI+V+ E G DALR+ L+   + G D  YD+  +    N   AN + N  SR V 
Sbjct: 526 GNGVDPIDVVNEYGADALRFTLITGNSPGNDMRYDEKRILASRN--FANKLWN-ASRFVL 582

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           M ++D D +  T       D+ IL   + V+ ++ +N++   I  A  ++   +     D
Sbjct: 583 MNIEDGDDLEFTGENLELEDKWILKRLNDVIVDVTKNLEKYEIGLAADRIEDFIWNEYCD 642

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   + +    V  V + V++ + ILL  F+P +  +I+  L    +   
Sbjct: 643 WYIEFAK-IRLYGDDKEAKKNVKKVLLYVLKNMLILLHPFMPFITEEIYASLPNKKDLLI 701

Query: 486 FQSLDQ 491
            ++  +
Sbjct: 702 VEAWPE 707



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 18/168 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I           H+GHA    I D++ R+ RL G + L+  GTD          
Sbjct: 31  DKKPFSIVMPPPNVTGYLHLGHALNNTIQDIIIRYKRLAGFEALWIPGTDHASISTESKV 90

Query: 63  QNAG----------------VTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  +     ++    + +S  +D    T ++    
Sbjct: 91  VEKIAGEGKTKQDLGREGFLEEAWDWTHKYGGRIKEQLRTIGVSCDWDHDSFTMDENLTR 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++KK+ D G IY+G     +    E   +D EVY      +   
Sbjct: 151 AVKKVFKKMYDDGYIYRGDRIVNWDPLAETAISDAEVYHEDQVGHLWY 198


>gi|257417098|ref|ZP_05594092.1| valyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158926|gb|EEU88886.1| valyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 880

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|257869995|ref|ZP_05649648.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804159|gb|EEV32981.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 879

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 137/356 (38%), Gaps = 35/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +    +         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMGPLAKEAIDNQSTDQAVEFFPPRFNQTFLRWMENIHDWVISRQ-LWW 411

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 412 GHQIPAWYHNETGEMYVGLEAPADAENWTQDPD-VLDTWFSSALWPFSTMGWPDENSADY 470

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 471 QRYFPTNTLVTGYDIIAFWVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNG 530

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N  SR V M +
Sbjct: 531 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ASRFVLMNV 587

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +          G  + +D  IL+  +  ++++ E         A  Q+ + + +   D Y
Sbjct: 588 EGMTVTDIDFSGEKSVADRWILTRLNETIEKVTELFDRFEFGEAGRQLYNFIWDDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   N         + V V+ Q+  LL   +P +  +I+  L    ++
Sbjct: 648 IEMSK-ETLYGENEAAKQVNKSILVHVLDQILRLLHPIMPFVTEEIWSKLPHTGDS 702



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    L +S D      T ++   
Sbjct: 94  VEEKLREQGISRYDLGREKFVDQVWEWKEEYAGHIREQWAKLGLSLDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  R ++  + +K  IY+G Y   +  +     +D EV  
Sbjct: 154 DAVRKVFVTLYEKDLIYRGEYIINWDPQARTALSDIEVIH 193


>gi|256962803|ref|ZP_05566974.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272656|ref|ZP_07553904.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256953299|gb|EEU69931.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510651|gb|EFM79673.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 880

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   ++         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQKTEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|225569430|ref|ZP_03778455.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
 gi|225161638|gb|EEG74257.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
          Length = 885

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/392 (21%), Positives = 158/392 (40%), Gaps = 37/392 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           +E  Y    V    +   ++  H  V+ + ++ +F ++       +   ++     +P  
Sbjct: 328 EEQGYLVKVVPHSHNVGTHDRCHTTVEPLIKQQWFVKMEELAKPAIEAVKTGELKFVPE- 386

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
           R +++       ++D  +SR+ +                             G       
Sbjct: 387 RFDKIYLHWLENIRDWCISRQIWWGHRIPAYYCDECGEFVVARQMPETCPHCGCTHFTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+    +     F+P D+ V G DI+ F    + +  +  + 
Sbjct: 447 EDTLDTWFSSALWPFSTLGWPKQNE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYAHTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P              G K+SKSLGN IDP+E+IE+ G DALR  LV   A G D  + 
Sbjct: 506 KSPFHTVFIHGLVRDSLGRKMSKSLGNGIDPLEIIEQYGADALRMTLVTGNAPGNDMRFY 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + ++   N   AN + N  SR + M ++  +   P        D  ILS C+R+++E+ 
Sbjct: 566 NERVEASRN--FANKVWN-ASRFILMNIEGKEITEPEASELLPGDRWILSKCNRLIREMT 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLA 459
           ENM    +  AL +V   + +   D Y +  K      +  P+ A+  L+V   V++   
Sbjct: 623 ENMDKFELGIALQKVYDFIWDEFCDWYIEIAKQRIYRAEEEPESANAALWVLKTVLKDAL 682

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            LL  F+P ++ +I+  L   +E+    +  +
Sbjct: 683 KLLHPFMPFVSEEIYGKLVPEEESLMMSAWPK 714



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 20/179 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R +   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSRKPFTTVMPPPNITGRLHMGHALDNTLQDILIRYKRMQGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +         L +S  +D    T +   
Sbjct: 93  KVTNQLKEEGIDKKELGREKFLERTWQWKEEYAGTIEGQLKKLGVSCDWDRERFTMDDGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            +    ++ K+ ++G IYKG     +    +   +D EV        +     P+   E
Sbjct: 153 SEAVEEVFIKLYEEGYIYKGSRIINWCPVCKTSLSDAEVEHEEQDGSFWHVKYPIVGTE 211


>gi|256960312|ref|ZP_05564483.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293388509|ref|ZP_06633013.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|312905725|ref|ZP_07764747.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909080|ref|ZP_07767940.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256950808|gb|EEU67440.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291082113|gb|EFE19076.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|310628204|gb|EFQ11487.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290642|gb|EFQ69198.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 880

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|255974415|ref|ZP_05425001.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|307281862|ref|ZP_07562078.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|255967287|gb|EET97909.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|306503893|gb|EFM73114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
          Length = 880

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|160894055|ref|ZP_02074834.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50]
 gi|156864433|gb|EDO57864.1| hypothetical protein CLOL250_01610 [Clostridium sp. L2-50]
          Length = 923

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 37/380 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F R+       L   ++     +P +     I ++
Sbjct: 380 VPHTHNVGTHDRCKTTVEPMIKPQWFVRMKEMGQAALDLIKTDELEFVPEQFDKTYIHWL 439

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           +  ++D  +SR+ +                             G       +  +  W  
Sbjct: 440 E-NIRDWCISRQLWWGHRIPAYYCDECHETIVSREVPTVCPKCGCTHLTQDEDTLDTWFS 498

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+          F+P D+ V G DI+ F    + + A   +   P    + 
Sbjct: 499 SALWPFSTLGWPKKTP-EYEYFYPTDVLVTGYDIIFFWVIRMVFSALEQTGKSPFKHVLI 557

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 558 HGLVRDDQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVENSRN 617

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N  SR + M ++  D         T +D  ILS  + +  E+ +NM+   + 
Sbjct: 618 --FANKIWN-ASRFIMMNMEKADFSNVKLSDLTIADRWILSKVNDLAVEMTDNMEKYELG 674

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A+++V   + E   D Y +  KP      +  +A+ +  +   +IR L  LL  ++P +
Sbjct: 675 IAVSKVYDFIWEEFCDWYIEMVKPRLYNDADETKAAALWTLKTVLIRAL-KLLHPYMPFI 733

Query: 470 ANKIFDILFVADENRCFQSL 489
             +IF  +   +E+      
Sbjct: 734 TEEIFCNIQDEEESIMISDW 753



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L RF R+ G   L+  GTD         
Sbjct: 76  RSKKPFTIVMPPPNVTGQLHMGHALDNTMQDILIRFKRMQGYSALWQPGTDHAAIATEVK 135

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++      +    L  S  +D    T ++   
Sbjct: 136 VTEKLKAEGIDKKEIGREAFLQHAWKWKEEYGGRIVNQLKKLGSSADWDRERFTMDEGCS 195

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +  + ++  + +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 196 EAVKEVFVNLYEKGYIYKGSRIINWCPVCKTSISDAEVEHVEQEGHFWHINYPIVGEE 253


>gi|307692585|ref|ZP_07634822.1| valyl-tRNA synthetase [Ruminococcaceae bacterium D16]
          Length = 876

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/411 (22%), Positives = 156/411 (37%), Gaps = 44/411 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L ++ Y    E ++   G  Y   H+ V+ +    +F +++   
Sbjct: 313 YSGMDRYEARKAIVADLEEQGYLVKVEPHQHNVGTCYR-CHSDVEPIISAQWFVKMAPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
            + +   E      +P  R ++        + D  +SR+   WG +I             
Sbjct: 372 KEAIRVVEEGETKFVPD-RFSKTYLNWMENVHDWCISRQ-LWWGHQIPVWYCDDCGHMTV 429

Query: 221 ----------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                             DP  ++  W  +     +T G+ +  +  K  F+P D+ V G
Sbjct: 430 SREDACECEKCHSKNIHRDPD-VLDTWFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTG 487

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+ F    + + A   +   P             KG K+SKSLGN IDP+E+ E+ G 
Sbjct: 488 YDIIFFWVARMIFSACEQTKQPPFHTVFIHGLVRDDKGRKMSKSLGNGIDPLEIAEKYGA 547

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DALR+ LV   + G D  +  +  +   N   AN I N  SR + M L         P  
Sbjct: 548 DALRFNLVTGNSPGNDMRFYTERCEAMRN--FANKIWN-ASRFLMMNL--TIDKCELPEK 602

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
               D+ ILS  +R + EI ENM    +  A  ++   + +   D Y +  K   L+  +
Sbjct: 603 LELEDKWILSKLNRAIGEITENMDKYELGVAAQKIYDFIWDDYCDWYIELTKT-RLQGDD 661

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            D       V   V+  +  LL  F+P +  +I+  L    +        Q
Sbjct: 662 EDSKVRAQQVLCYVLTDMLKLLHPFMPFITEEIWQALPHEGDFLMLSQWPQ 712



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 60/178 (33%), Gaps = 19/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+   I         Q H+GHA +  + D+L RF R++G   L+  G D  G       
Sbjct: 35  ERKPFTIVMPPPNVTGQLHMGHAMDCALQDILIRFKRMEGYAALWVPGMDHAGIATQIKV 94

Query: 63  QNAGVT-----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
           +    T                    +  +           + +S  +D    T ++   
Sbjct: 95  EEELRTKEGLTRYDLGREKFLERVWDWKHKYGDRIVKQQKKMGVSCDWDRARFTMDEGCS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R ++  + +KG IYKG     +        +D EV       Y+     P+Q  E
Sbjct: 155 KAVREVFCSLYEKGLIYKGSRIINWCPHCVTALSDAEVEYQDKPGYFWHIRYPIQGEE 212


>gi|313885106|ref|ZP_07818858.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619797|gb|EFR31234.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 877

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/367 (21%), Positives = 136/367 (37%), Gaps = 35/367 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   S        +R N+        + D  +SR+   W
Sbjct: 353 VEPYLSTQWFVKMQPLAQAAINNQASDRRVDFFPDRFNDTFISWMENVHDWVISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 412 GHQIPAWYHKETGEVYVGEEAPADEENWDRDSDVLDTWFSSALWPFSTMGWPDKSQNDYQ 471

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 472 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGQRPFKNVLLHGLIRDEEGRKMSKSLGNGI 531

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIEE GVDALR+FL    A G+D  Y  + L    N    N I N  SR V M + 
Sbjct: 532 DPMDVIEEYGVDALRWFLANGSAPGQDVRYSPEKLAAAWN--FINKIWN-ASRYVLMKVG 588

Query: 372 DYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D        G+ T  +D+ ILS     ++ +           A   +   + +   D Y 
Sbjct: 589 DMTLADVEIGSDTSLADQWILSRLQETIETVTRLFDKFEFGEAGRALYHFIWDDYCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K       N     T   + + V+ +   LL   +P +  +I+      DE+    +
Sbjct: 649 EMTK---ESLQNDQDNKTTKSILIYVLDKFLRLLHPIMPFVTEEIWQQFNPEDESIVVAA 705

Query: 489 LDQRLKP 495
               ++P
Sbjct: 706 YPTVVEP 712



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         + H+GHA+++ + D+L R  R+ G D L+  G D  G      
Sbjct: 34  TEAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMLIRQKRMLGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++ ++  R     + +S  Y+    T ++  +
Sbjct: 94  VEAKLKEEGLSRYDLGREKFLEKTWEWKEEYAQTIRQQWAKMGVSVDYNRERFTLDEGLN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +   ++  + +KG IY+G Y   +    +   +D EV        +   + PV   +E
Sbjct: 154 KSVNKVFVDLYNKGLIYRGEYIINWDPAAQTALSDIEVIHKDVKGAFYHINYPVVGSDE 212


>gi|312143436|ref|YP_003994882.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904087|gb|ADQ14528.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 884

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/425 (20%), Positives = 163/425 (38%), Gaps = 43/425 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  E      E ++   G+ Y      ++ +  + +F ++    
Sbjct: 313 YSGLDRYEARKKVVADLDKENLLIKTEDHQHNVGECYR-CDTVIEPLVSKQWFVKMQPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +  +          +P  R ++V     + ++D  +SR+   WG +IP            
Sbjct: 372 EPAIEAVAEGDINFVPD-RFSKVYMNWMNNIRDWCISRQ-LWWGHRIPVYYCDDCGEVMV 429

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              + ++  W  +     +T G+ +  +     F+P D+ V G+
Sbjct: 430 SRERPENCSNCESNNLHQDEDVLDTWFSSALWPFSTLGWPEQSE-DLISFYPTDVLVTGR 488

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + +         P             +G K+SKSLGN IDP+EV+++ G D
Sbjct: 489 DIIFFWVARMIFMGLKFQDEKPFSDIYIHGLIRDAQGRKMSKSLGNGIDPLEVVDKYGAD 548

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ L+     G D  + ++ L+   N   AN I N  SR V M L+D+D         
Sbjct: 549 ALRFTLITGNTPGNDMRFREERLEASRN--FANKIWN-ASRFVLMNLEDFDLEALDKSDL 605

Query: 384 --TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT 439
             T +D+ + S  + V+ EI + +++       + +   +     D Y +  K    ++ 
Sbjct: 606 KETLADKWMQSRLNTVIAEIDDALEDYNFGEMASSLYDFIWNEFCDWYIELLKARLYQEE 665

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +P    T  Y  +  +  L  LL   +P +  +I+  L   + +       ++ K    L
Sbjct: 666 DPAAKLTAQYYALNTLESLLRLLHPVMPFITEEIWQKLPGTEGSIMRAPWPEKDK--TKL 723

Query: 500 HKTFD 504
           +K  +
Sbjct: 724 NKDAE 728



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 35  TEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQGYRSLWLPGTDHASIATEVK 94

Query: 62  A--------------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                + A    + + ++ +   + M    D S + F  T ++ 
Sbjct: 95  VVDKLKDQGIEKDEIGREGFLEKAWEWKEEYGNRITNQLKKMGSSCDWSRERF--TLDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +    ++ ++ ++G IY+G Y   +        +D EV        +     P +  E
Sbjct: 153 CSEAVEEVFIQLYNEGLIYQGDYIVNWCPSCHTTLSDIEVEHKETEGKFYHMKYPYKNKE 212


>gi|302391303|ref|YP_003827123.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203380|gb|ADL12058.1| valyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 883

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/401 (21%), Positives = 150/401 (37%), Gaps = 39/401 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+        L++     + E +  + G  Y      ++ +  + +F ++    
Sbjct: 313 YEGMDRYECREQLVEDLKETGQLIEIEEHDHSVGHCYR-CDTVIEPLVSKQWFVKMDPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ------ 225
              +   E      +P  R  +V       ++D  +SR+   WG  I +           
Sbjct: 372 KPAIEAVEESETDFVPD-RFTKVYRNWMENIRDWCISRQ-LWWGHRIPVWYCQDCEEEIV 429

Query: 226 --------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ +  +  +  + P  + V G+
Sbjct: 430 AREEPASCPECGGDDLKQDEDVLDTWFSSGLWPFSTLGWPEETEELEYYY-PTSVLVTGR 488

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + +         P    +        +G K+SKSLGN IDPIE I+E G D
Sbjct: 489 DIIFFWVARMIFSGLEFMEETPFSDVLVHGLVRDAQGRKMSKSLGNGIDPIEFIDEYGAD 548

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR+ LV     G D  + ++ ++   N    N I N  SR V M L+D+D        +
Sbjct: 549 TLRFTLVTGNTPGNDMRFRQEKVEASRN--FVNKIWN-ASRFVLMNLEDFDPEEVEELDY 605

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T +D+ I+S  +   QE+   +    I  A   +   +     D Y +  KP   +  + 
Sbjct: 606 TLADKWIISRLNETAQEVTRTLDKYQIGNAAQTLYDFIWNEFCDWYIELIKPRLYQDEDQ 665

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
               T  YV   V+ Q   LL  F+P +  +I+  L    E
Sbjct: 666 VVKETAQYVVSSVLEQSLRLLHPFMPFVTEEIWQKLPYEGE 706



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++E   I         Q HIGHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 35  EDKESFTIVMPPPNVTGQLHIGHALDNTLQDILIRWKRMQGYSALWIPGTDHASIATEVK 94

Query: 62  AQNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             N                          + +  + +   + +    D S + F  T ++
Sbjct: 95  VVNKLREEEGLEKDDVGREGFLKRAWDWKEEYGGRITDQLKKLGTSCDWSRERF--TMDE 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 +  + ++ +K  IY+G Y   +        +D EV  
Sbjct: 153 GCSKAVKEAFIQLYEKDLIYRGDYIINWCPDCGTTLSDIEVEH 195


>gi|257420570|ref|ZP_05597560.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257162394|gb|EEU92354.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156411|gb|EFU00428.1| valyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENIHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEADKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|307288317|ref|ZP_07568312.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306500703|gb|EFM70025.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165976|gb|EFU09993.1| valyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGENEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|256761215|ref|ZP_05501795.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256682466|gb|EEU22161.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAAYIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|29377395|ref|NP_816549.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554378|ref|ZP_03984425.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|75541540|sp|Q82ZW6|SYV_ENTFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29344862|gb|AAO82619.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176497|gb|EEI57469.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315576283|gb|EFU88474.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582775|gb|EFU94966.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ +       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|229547604|ref|ZP_04436329.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548188|ref|ZP_04436913.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|256852478|ref|ZP_05557854.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257091151|ref|ZP_05585512.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902616|ref|ZP_07761821.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229306667|gb|EEN72663.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307294|gb|EEN73281.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256712332|gb|EEU27364.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256999963|gb|EEU86483.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633954|gb|EFQ17237.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315030884|gb|EFT42816.1| valyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315163283|gb|EFU07300.1| valyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578975|gb|EFU91166.1| valyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAIENQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|228475237|ref|ZP_04059963.1| valine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270848|gb|EEK12250.1| valine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 876

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 135/355 (38%), Gaps = 34/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQQALDNQKTDNRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 410 GHQIPAWYHNETGEVYVGEEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPNEEAKDYQ 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P ++ V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNVLVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIEKYGADSLRYFLATGSSPGNDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  ++ +    +          + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIETVTNLSEKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +  K P  +   +  +  T   V    + Q+  +L  F+P +  KI+  L    E
Sbjct: 648 EMSKIP--MNGEDEAQKQTTRSVLSYTLDQIMRMLHPFMPFVTEKIWQSLPHEGE 700



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + RE   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  ESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 60  -----------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +       + K  +     + +  +   LD S + F  T +  
Sbjct: 92  VDAKLKEQGISRHDIGREKFLEHAWSWKEEYASFIRKQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
                R ++  + +KG IY+G     +        +D EV      G +Y+ ++
Sbjct: 150 LSKAVRKVFVDLYNKGIIYRGERIINWDPVARTALSDIEVIHEDVQGHFYHFKY 203


>gi|323478896|gb|ADX78335.1| valyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEVPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|255970840|ref|ZP_05421426.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256958166|ref|ZP_05562337.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860819|ref|ZP_07106906.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307275085|ref|ZP_07556239.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899334|ref|ZP_07758668.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312952220|ref|ZP_07771097.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|255961858|gb|EET94334.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256948662|gb|EEU65294.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849858|gb|EFK77608.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306508203|gb|EFM77319.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310629807|gb|EFQ13090.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293536|gb|EFQ72092.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315036220|gb|EFT48152.1| valyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315154542|gb|EFT98558.1| valyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315160097|gb|EFU04114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315169319|gb|EFU13336.1| valyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315174736|gb|EFU18753.1| valyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|295397317|ref|ZP_06807409.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974391|gb|EFG50126.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 887

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 134/369 (36%), Gaps = 38/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D  L   ++         R             D  +SR+   W
Sbjct: 363 VEPRLSTQWFVKMRPLADNSLENQDTEDRVDFYPPRFENTFKTWMENAHDWVISRQ-LWW 421

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 422 GHQIPAWYHKETGEMYVGMEAPADSENWEQDPD-VLDTWFSSALWPFSTMGWPDTDAEDF 480

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 481 KRYYPTSTLVTGYDIIFFWVARMIFQGLEFTGRRPFKNVLIHGLIRDSQGRKMSKSLGNG 540

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+ E G DALR+FL      G+D  Y+++ L+   N    N I N  SR   M L
Sbjct: 541 VDPMDVVNEYGADALRWFLATGSTPGQDIRYNEEKLEAAWN--FINKIWN-ASRYAIMNL 597

Query: 371 KDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            D            E  D+ IL+  +  +  +  N        A   +   + +   + Y
Sbjct: 598 DDLTYDEIDLSNVNEIKDQWILTRLNETIASVTANFDKFEFGEAGRSLYHFIWDEFCNWY 657

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---R 484
            +  K   L+  +    +T   V    +  +  L+   +P +  +I+  +   + +    
Sbjct: 658 IEMAK-ETLQGEDEAAKATTRSVLAYTLNNILRLMHPIMPFVTEEIWAHIPHKEASIVTA 716

Query: 485 CFQSLDQRL 493
            + ++D+ L
Sbjct: 717 AYPTVDENL 725



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I         + H+GHA+++ + D+  R  R+ G D L+  G D  G      
Sbjct: 44  KTAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMSIRQKRMQGYDTLWLPGMDHAGIATQAK 103

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     + IS D      T +    
Sbjct: 104 VEAKLAEEGISRYDLGREKFIDQVWDWKEEYAETIRQQWGKMGISVDYSRERFTLDDGLS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  R ++  + +K  IY+G Y   +  + +   +D EV    D
Sbjct: 164 EAVRKVFVDLYNKDLIYRGEYIINWDPKAQTALSDMEVIYSDD 206


>gi|323694557|ref|ZP_08108723.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323501325|gb|EGB17221.1| valine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 879

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 147/380 (38%), Gaps = 37/380 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F ++       +   +S     +P       + ++
Sbjct: 336 VPHAHNVGTHDRCGTTVEPMVKPQWFVKMDEMAKPAIEALQSGRLKFVPESFGKTYLHWL 395

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           + G++D  +SR+ +                             G       +  +  W  
Sbjct: 396 E-GIRDWCISRQLWWGHRIPAYYCEECGEMTVAKTTPAVCPKCGSTHLHQDEDTLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        F+P D+ V G DI+ F    + +     +   P    + 
Sbjct: 455 SALWPFSTLGWPEKTP-EFEYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKEPFHTVLI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 514 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFYWERVEASRN 573

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  +R + M ++       +    T +D  ILS  + + +++ ENM    + 
Sbjct: 574 --FANKVWN-ATRFIMMNIEKAPDADVSLSDLTMADRWILSKVNTLAKDVTENMDRYELG 630

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   + E   D Y +  KP  L   N    +  L+    V+     LL  ++P +
Sbjct: 631 IALQKVYDFIWEEFCDWYIEMVKP-RLWDDNDTTKAAALWTLKTVLINSLKLLHPYMPFI 689

Query: 470 ANKIFDILFVADENRCFQSL 489
             +IF  L   + +    S 
Sbjct: 690 TEEIFCNLQDEEPSIMISSW 709



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 18/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KNKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGFEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +   +                   + +            L  S  +D    T ++   
Sbjct: 93  VIDKLKSEGIDKHDLGRDKFLEKAWEWKEDYGSRIVKQLHKLGSSADWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           D    ++ K+ +KG IYKG     +    +   +D EV       ++   + P+   E+ 
Sbjct: 153 DAVLEVFTKLYEKGYIYKGSRIINWCPICQTSISDAEVEHEEQDGFFWHINYPIVGEEDR 212


>gi|303239683|ref|ZP_07326208.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592854|gb|EFL62577.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 883

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 146/382 (38%), Gaps = 40/382 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +          ++ +  + +F ++    +  +   ++     +P  R +++      
Sbjct: 341 HTHNVGTCYRCSTVIEPIISKQWFVKMKPLAEPAIEVVKNGTIKFVPE-RFSKIYFNWME 399

Query: 203 GLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWID 233
            ++D  +SR+   WG +IP                              DP   +  W  
Sbjct: 400 NIQDWCISRQ-LWWGHRIPAYYCKECGNMMVDNDMPDVCPKCGSSRIEQDPD-TLDTWFS 457

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+    +  K  F+P D+ V G DI+ F    + +         P      
Sbjct: 458 SALWPFSTLGWPQQTEDLK-YFYPTDVLVTGYDIIFFWVARMIFSGLEHMEKEPFKYVFI 516

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVIE+ G DALR+ L    + G D  +  + ++   N
Sbjct: 517 HGIVRDSQGRKMSKSLGNGIDPLEVIEQYGTDALRFALTIGTSPGNDLRFSSEKVESSRN 576

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +    ++ D        F  +D+ ILS  + + +E+ ENM    + 
Sbjct: 577 --FANKIWNASRFVLMNFDENIDFSKVDSTKFNSADKWILSRVNSLTKEVTENMDKFELG 634

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL ++   + E   D Y +  KP    + +  R     YV   V+     LL  ++P +
Sbjct: 635 IALQKIYEFIWEEFCDWYIELVKPRLYDREDSSRLEA-QYVLNYVLGSAMKLLHPYMPFI 693

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L   D++       Q
Sbjct: 694 TEEIYTHLINDDDSIMISKWPQ 715



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 36  KNKTPYTIVIPPPNITGQLHMGHALDNTLQDILIRWKRMQGFSALWLPGTDHASIATEAK 95

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
              A                        KV+  +     + +    D   + F  T ++ 
Sbjct: 96  IVEAMAKEGIKKEDLGREKFLDRAWDWKKVYGGRIVEQLKKLGSSCDWKRERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +  + ++ ++  K  IY+G     +  +     +D EV       ++     P++   
Sbjct: 154 LSEAVKEVFIRLYKKDLIYRGERIINWCPKCNTSISDAEVEYEEKAGHFWHIKYPIKDSN 213

Query: 162 E 162
           E
Sbjct: 214 E 214


>gi|257080637|ref|ZP_05574998.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|307290155|ref|ZP_07570074.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|256988667|gb|EEU75969.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|306498783|gb|EFM68281.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
          Length = 880

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|257088072|ref|ZP_05582433.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256996102|gb|EEU83404.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315028135|gb|EFT40067.1| valyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 880

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|170759549|ref|YP_001788482.1| valyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406538|gb|ACA54949.1| valine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 881

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y +  R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-EETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R  +        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMDELAKPAIEVVKNKNVKFVPE-RFEKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVATEEPTKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIAISKWPE 715



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  EDKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N  +                    + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLGKVWEWTDEYRGKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|254518604|ref|ZP_05130660.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912353|gb|EEH97554.1| valyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 880

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/388 (19%), Positives = 151/388 (38%), Gaps = 36/388 (9%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
               S  DE            +   ++     V+ +  + ++ ++ +     +   +++ 
Sbjct: 323 KQMVSDLDEQGLLVKVKPHTHNVGTHDRCGTVVEPIISKQWYVKMESLAKPAIEAVKNNE 382

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFD---------------------------WG 217
              +P  R +++       ++D  +SR+ +                             G
Sbjct: 383 TKFVPE-RFDKIYFNWMENIQDWCISRQLWWGHRIPVWYCNDCREIIVQVDAPETCPKCG 441

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            K     + ++  W  +     +T G+ +  +     F+P ++ V G DI+ F    + +
Sbjct: 442 SKHMHQDEDVLDTWFSSALWPFSTLGWPNETE-DLEYFYPTNVLVTGYDIIFFWVARMIF 500

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                    P    +        +G K+SKSLGN +DP+EVI+E G DALR+ LV   + 
Sbjct: 501 SGIHNMDKTPFDTVLIHGIIRDSQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNSP 560

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  Y  + ++   N   AN + N     +  + K+          ++ +D+ ILS  +
Sbjct: 561 GNDIRYIPERVEAARN--FANKMWNASRFVMMNLDKEVMDKYADCKEYSLADKWILSRMN 618

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            +++E+ ENM+   +  AL +V   +     D Y +  K   L   +  +   V  V  +
Sbjct: 619 TLVKEVTENMEKYELGIALQKVYDFMWTEFCDWYIELVK-GVLYGDDEKQKGIVYNVLND 677

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD 481
           V++    LL   +P +  +I+  L   D
Sbjct: 678 VLKTGLKLLHPVMPFITEEIYTTLTDGD 705



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 36  KNKKPFSIVMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +N                       + D+     R     + +S D      T ++  +
Sbjct: 96  VENELLKEGLIKKEMGREAFLEKVWEWADEYRDTIRTQLKKMGVSCDFSREAFTMDENLN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G     +  +     +D E+        +   + P+
Sbjct: 156 KAVRTVFVKLYNEGLIYQGNRITNWCPKCTTALSDAEIEYEEKEGSFWHINYPL 209


>gi|330684035|gb|EGG95792.1| valine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 142/369 (38%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 131 VEPYLSTQWFVKMKPLAKRALDNQKTDDRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 189

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 190 GHQIPAWYHNETGEVYVGENAPEDIENWTQDEDVLDTWFSSALWPFSTLGWPDVEAEDFK 249

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 250 RYFPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 309

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    A G+D  Y  + ++   N    N I N    S+  I +
Sbjct: 310 DPMDVIDEYGADSLRYFLATGSAPGQDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 367

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 368 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDEFCDWYI 427

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   + D+  T   V   V+ ++  +L  F+P +  KI+  L    E     
Sbjct: 428 EMSKIP--MNGEDEDQKQTTRSVLSYVLDRIMRMLHPFMPFVTEKIWQSLPHDGETIVQA 485

Query: 485 CFQSLDQRL 493
            + ++++ L
Sbjct: 486 SWPTVNEEL 494


>gi|149181773|ref|ZP_01860264.1| valyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850514|gb|EDL64673.1| valyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 881

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 35/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK +       +     +R            +D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADKAIELQNGEEKVNFVPDRFETSYLRWMENTRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGEIHVGKEEPADIENWRQEEDVLDTWFSSALWPFSTMGWPDTEAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 475 RYYPTDALVTGYDIIGFWVSRMIFQGLEFTGTRPFNDVLIHGLVRAEDGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALRY L    + G+D  Y  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMEVIDQYGADALRYMLSTGSSPGQDLRYSTEKVESVWN--FANKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 592 GLKYEEIDLTGEKSAADKWILTRLNETIETVTKLADRYEFGEVGRILYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+     LL  F+P +  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITTA 709

Query: 488 SL 489
           + 
Sbjct: 710 AW 711



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+E   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  KEKEPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    +                T  + ++ +++ R     L +  D      T ++   
Sbjct: 97  VEEKLRSEGTTRYDLGREKFLEETWKWKEEYAKHIRAQWSKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 157 DAVKEVFVTLYEKGLIYRGEYIINWDPATKTALSDIEVIH 196


>gi|295114302|emb|CBL32939.1| valyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 880

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIEFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|300707442|ref|XP_002995928.1| hypothetical protein NCER_101052 [Nosema ceranae BRL01]
 gi|239605171|gb|EEQ82257.1| hypothetical protein NCER_101052 [Nosema ceranae BRL01]
          Length = 525

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 104/523 (19%), Positives = 193/523 (36%), Gaps = 56/523 (10%)

Query: 33  VLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           + ARF R +  DV+F +GTDE+G  I  AA     T     ++N    + + D  +I +D
Sbjct: 1   MYARFCRKNNEDVVFLSGTDEYGTAIEMAAFAQNKTPLQICEENRIIHKKIYDWFNIDFD 60

Query: 93  DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ---- 148
            F  TT   H    +  + KI + G   +     ++  + + +  D  V           
Sbjct: 61  FFGHTTSTAHTKNVQDFFNKIHNNGFFTEQEIEQFFCDKCQIFLADRYVVGTCKFCKYTD 120

Query: 149 ---------------------YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
                                     H+          FF  + ++D  L    +     
Sbjct: 121 AKGDQCDGCGHTYKSLDLIDAKCTLCHSFPNIKSTRHLFFDFNNFKD-KLQKLFNTNSQY 179

Query: 188 LPIERRNEVISFVKSGLKDLSLSRK-TFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGY 244
                +    S++   L    ++R     WG+ +P     + + YVW DA+  Y T    
Sbjct: 180 WSENGKQITKSWLDQELLPRCMTRDLKNRWGVPVPLKDFEEKVFYVWFDAVIGYFTFYKE 239

Query: 245 L-----DNPDGSKAKFWPAD--------LHVIGKDILRFHAIYWPAFLLSAN--LPLPKK 289
                 ++ +  K   +  D        +  +GKD + FH I +P+ + + N   PL KK
Sbjct: 240 YVAARSESKELDKNNVFATDNILQDCELVQFMGKDNVFFHTIVFPSLIFATNDSYPLIKK 299

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDA-LRYFLVREIACGKDGFYDKDGLK 347
           +    F+L + EK SKS G+ I  ++ V   +G     RY+L +      D  +      
Sbjct: 300 LSVTEFLLFENEKFSKSRGHGIFGLDLVDNTMGQSCLWRYYLAKIRPEKCDSNFSFTHFT 359

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
             ++ADL N IGN  +R +  I K+ +  + +       D+ ++    ++ +E   +   
Sbjct: 360 NVIDADLNNNIGNFCNRVLKYI-KNKNDKLISIDKLEHRDDLMVQTIDKIYKEYLTSFSA 418

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             I  AL +++ +    + Y          K    +      V   ++  +  LL+ F+P
Sbjct: 419 IRIREALEKILEISKVGNEYVQQV---VSSKIEVPKG---FQVAFSIVVLIGQLLEPFIP 472

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             + K+  +     EN C       +     +     P+F + 
Sbjct: 473 VSSEKLLKMCNRKKENFCES---FYIIKSAEIGDDIKPLFNKL 512


>gi|167997889|ref|XP_001751651.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697632|gb|EDQ83968.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 753

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 92/535 (17%), Positives = 171/535 (31%), Gaps = 86/535 (16%)

Query: 29  IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           + ADV AR+ R  G +V++  GTDE G      A   G+T +   D+      D+ +  D
Sbjct: 21  LSADVYARYCRRQGYNVVYMCGTDEFGTATKTKAMEEGLTPREICDKYHAIHEDIYEWFD 80

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           I +D F RT   +  +  + ++  + +K  + +      Y      +  D  V       
Sbjct: 81  IDFDKFGRTATPQQTEIAQSIFMSLYEKKRLNENTMIQPYCTTCSRFLADRLVEGTCPTP 140

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
               +       +  G            L           P +R  + +     GL D  
Sbjct: 141 GCGYEDARGDQCDLCGKLLNADD-----LISPRCKVGGNTPEKRPTDHLFLDLPGLND-- 193

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL--DNPDGSKAKFWPADLHVIGKD 266
                    I            W                     ++   W   + +    
Sbjct: 194 ----QLQQYITNTLKTGG----WSSNSIQQTNAWIRDGLKERCITRDLKWGVPVPLEKYK 245

Query: 267 ILRFHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVD 323
                 + +P  LL       L K +    ++ ++  K SKS G  +   +V    + V+
Sbjct: 246 Q----KVIFPCTLLGTEDSWTLMKAISVTEYLNYESGKFSKSRGVGVFGNDVKSTNIPVE 301

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK------------ 371
             RY+L+       D  +    L+ + N +L   +GN V R++S + K            
Sbjct: 302 VWRYYLLINRPEVSDTLFTWVDLQAKQNNELLKNLGNFVHRTLSFLAKPSVFVSYKIVSG 361

Query: 372 ---------------------------DYDGMIPTPGAFTESD--ESILSVCSRVLQEIR 402
                                       Y  +IP  G   E +  + +       + E  
Sbjct: 362 ISIRSGGFASLTTYISKMTVEYVCREGGYRKVIPEVGNPEEYELTKKLALKVKGTIDEYI 421

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           + M+   +   L   +          +  + W+L K +    S +L  ++ ++  LAILL
Sbjct: 422 KCMEAVKLKTGLKAAM----------EESQFWKLYKKDKPACSILLKTSIGLVHLLAILL 471

Query: 463 QAFVPKLANKIFDILFVADENRCF----QSLDQRLKP------GFMLHKTFDPIF 507
           + F+P  ++K+   L +             L++  KP      G  +    +PIF
Sbjct: 472 EPFMPSFSHKVLLQLNLPASTLSLVDEDGDLERACKPWMLVESGHTIGNP-EPIF 525


>gi|167465172|ref|ZP_02330261.1| valyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 853

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 144/375 (38%), Gaps = 42/375 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   +S        +R  ++       ++D  +SR+   W
Sbjct: 325 VEPYLSTQWFVKMKPLAEKAIEVQKSDKGVHFVPDRFEKIYLHWIENIRDWCISRQ-LWW 383

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +     +T G+ +  
Sbjct: 384 GHRIPAWYCNSCGEVTVSGEDVTCCQHCQSNDIRQDEDVLDTWFSSALWPFSTLGWPEQT 443

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D  K +++P ++ V G DI+ F    + + +   +  +P    +        +G K+SKS
Sbjct: 444 DDLK-RYFPTNVLVTGYDIIYFWVARMIFSSLEFTGQIPFKDVLVHGLVRDAEGRKMSKS 502

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+EVI++ G DA+RY L      G+D  +  + +++  N   AN I N  SR  
Sbjct: 503 LGNGIDPLEVIKQYGADAMRYMLSTSSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 559

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+ ++       G    SD  IL   +   +++   +           + + + +  
Sbjct: 560 LMNLEGFNMEDLDFGGELGTSDRWILHRFNETARDVTRLLDQYEFGETGRLLYNFIWDDL 619

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   +         V V V+     L+  F+P ++ +I+  L    E 
Sbjct: 620 CDWYIEFSK-LSLYGDDEQAKKKTQSVLVYVLDHTMRLIHPFMPFISEEIWQHLPHEGET 678

Query: 484 RC---FQSLDQRLKP 495
                +   D R + 
Sbjct: 679 ITRTAWPHPDDRFEA 693



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           HIGHA +  + D++ R  R+ G D L+  G+D  G       
Sbjct: 7   EREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGSDHAGIATQTKV 66

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
           +                        + +  +   R+    + +S D F R   T ++   
Sbjct: 67  EQKLREEGVSRYDLGREAFLEKVWDWKELYAGTIREQWGKMGLSLD-FSRERFTLDEGLS 125

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ DKG IY+G Y   +        +D EV  
Sbjct: 126 KAVRKVFVKLYDKGLIYRGKYIINWDPAARTALSDIEVEY 165


>gi|150389212|ref|YP_001319261.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949074|gb|ABR47602.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 884

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 83/378 (21%), Positives = 148/378 (39%), Gaps = 46/378 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
               +  V+ +  + +F ++       +   +      +P  R ++  +     ++D  +
Sbjct: 347 CYRCNTIVEPLTSDQWFVKMEPLAKPAIEAVKEKEIQFVPE-RFSKTYTQWLENIRDWCI 405

Query: 210 SRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTT 241
           SR+   WG +IP                               + ++  W  +     +T
Sbjct: 406 SRQ-LWWGHRIPAYYCQDCGEVIVSKTTPTVCGKCQGNQLKQDEDVLDTWFSSALWPFST 464

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-K 299
            G+ +        F+P D+ V G DI+ F  +      L     +P K VF HG +    
Sbjct: 465 LGWPEKTA-ELDYFYPTDVLVTGYDIIFFWVVRMAFSGLEFMDEIPFKHVFIHGLVRDAD 523

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+ +I++ G DALR+ LV   + G D  +  + L+   N   AN + 
Sbjct: 524 GRKMSKSLGNGIDPLNIIDQYGADALRFTLVTGNSPGNDMRFHMEKLESSRN--FANKLW 581

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N    +   +L + D    T     E    +D  I+S  ++V +E+ ENM    +  A  
Sbjct: 582 N----ATRFVLMNLDEKEITEEEVKEHLNTADRWIISRVNQVTKEVTENMDKFELGMAAQ 637

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++   +     D Y +  K   L   N D+     Y    V+  +  LL  F+P +  +I
Sbjct: 638 KIYDFIWSEYCDWYIELTKT-RLYGENEDKRKAAQYTLTSVLADILKLLHPFMPFITEEI 696

Query: 474 FDILFVADENRCFQSLDQ 491
           +  L   D +    +   
Sbjct: 697 WQHLPTVDGSVIIAAWPT 714



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 23/181 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD          
Sbjct: 35  DKESYSIVLPPPNITGQLHMGHALDHTLQDILIRWKRMQGFETLWQPGTDHASIATEVKV 94

Query: 63  QNAGVTT-----------------KVFVDQNSR----NFRDMADVLDISYDDFIRTTEKR 101
                                     + D++ R      + M D  D S + F  T ++ 
Sbjct: 95  VEKIKREEGLSKLDIGRDGFLQRAWEWRDEHGRTIVNQMKRMGDSCDWSRERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            ++    ++ K+ +KG IY+G     +    +   +D EV       ++     P++  +
Sbjct: 153 CNEAVTEVFIKLYEKGLIYRGNRIINWCPECKTSLSDAEVEHEDKAGHFWHIQYPIKDTD 212

Query: 162 E 162
           E
Sbjct: 213 E 213


>gi|89098946|ref|ZP_01171826.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086350|gb|EAR65471.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 880

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 134/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D+ ++  +   +     +R           ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADEAVALQQKEDKVNFIPDRFENTYLRWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D  +    
Sbjct: 415 GHRIPAWYHKETGEVYVDSEPPADAENWTQDNDVLDTWFSSALWPFSTMGWPDEENPDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RYYPTASLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI + G D+LRYFL    + G+D  +  + ++   N   AN I N  SR   M + 
Sbjct: 535 DPMDVIAQYGADSLRYFLSTGSSPGQDLRFSMEKVEATWN--FANKIWN-ASRFALMNMA 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+  +  ++ +               + + + +   D Y 
Sbjct: 592 GLKFEDIDLTGEKSVADKWILTRLNETIETVTRLSDRYEFGEVGRVLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   +   V+     LL  F+P +  +I+  L  + E+    
Sbjct: 652 EMAKLP--LYGEDEAAKKTTRSILAYVLDNTMRLLHPFMPFITEEIWQNLPHSGESITIA 709

Query: 488 SLDQ 491
              +
Sbjct: 710 EWPK 713



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  QSKEPYTIVIPPPNVTGRLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    +                T  + ++ + + R     L +  D      T ++   
Sbjct: 97  VEQKLKSEGKSRYDLGREAFVQETWKWKEEYADHIRQQWSKLGLGLDYSRERFTMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                ++  +  KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVNKVFVSLYKKGLIYRGEYIINWDPATKTALSDIEVIH 196


>gi|154279182|ref|XP_001540404.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
 gi|150412347|gb|EDN07734.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
          Length = 324

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 116/276 (42%), Positives = 158/276 (57%), Gaps = 16/276 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 56  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 115

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +   DQN + F+++A   ++ YD FIRTT+  H +        ++ +G IY 
Sbjct: 116 AAALGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEA-----DMLNHRGYIYT 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYK------GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             + GWYS+ DEA+Y    V        G            VQW  EE Y FRLS +Q+ 
Sbjct: 171 SKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIITSIETGKEVQWASEENYHFRLSTFQEP 230

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           LL ++  +P FI P    + ++S V SGL+DLS+SR      WGI +P D   ++YVW+D
Sbjct: 231 LLEHFRKNPNFITPRNYMDGIVSAVTSGLQDLSISRPASRLKWGIPVPYDESQVIYVWLD 290

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           AL NY+T  GY   P       WPAD+HV+GKDILR
Sbjct: 291 ALVNYITYAGYPFPPGA--QSIWPADVHVVGKDILR 324


>gi|315645746|ref|ZP_07898870.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279224|gb|EFU42534.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 889

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 74/413 (17%), Positives = 139/413 (33%), Gaps = 38/413 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G     C     +   E+              +       V+      +F  +      
Sbjct: 319 QGLDRSECRKQIVNDMKESGVLLRVEDHVHQVGHSERTGAVVEPYLSTQWFVNMQPLAQA 378

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            +   +S        +R           ++D  +SR+   WG +IP              
Sbjct: 379 AVEAQKSGKGVNFVPDRFERTYLHWMENVRDWCISRQ-LWWGHRIPAWYSESTGEVVVAM 437

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                            + ++  W  +     +T G+ D       +++P ++ V G DI
Sbjct: 438 NEEEARAKLGKDDLRQDEDVLDTWFSSALWPFSTMGWPDLDSEDFKRYYPTNVLVTGYDI 497

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    + +     +  +P    +        +G K+SKSLGN IDP+EVIE+ G DA+
Sbjct: 498 IPFWVSRMIFQGLEFTDQMPFKDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIEQYGADAM 557

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFT 384
           RY +      G+D  +  + +++  N   AN I N  SR   M L+ +        G   
Sbjct: 558 RYMISTGSTPGQDLRFRWERVEQARN--FANKIWN-ASRFALMNLEGFTAADIDISGELG 614

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
            +D  IL   +   ++I   +           + + + +   D Y +  K   L   +  
Sbjct: 615 TADRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDLCDWYIEFAK-LSLYGEDQA 673

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  V   V+ +   L+  F+P ++ +I+  L    E     S       
Sbjct: 674 AKKKTQSVLAYVLDRTMRLIHPFMPFISEEIWQHLPHEGETVMLASWPTYDPA 726



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           + E   I           HIGHA +  + D+L R  R+ G D L+  G+D  G     K+
Sbjct: 42  DAEPYTIVIPPPNVTGMLHIGHALDFTLQDILIRVKRMQGYDALWLPGSDHAGIATQTKV 101

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +  +  GVT               + D  +   RD    + +S D      T ++   +
Sbjct: 102 EQKLREEGVTRYDLGREKFLEKVWEWKDLYANTIRDQWSKIGLSLDYSRERFTLDEGLSE 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+ DKG IY+G     +        +D EV  
Sbjct: 162 AVREVFVKLYDKGLIYRGKRIINWDPAARTALSDIEVEY 200


>gi|315303316|ref|ZP_07873947.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628314|gb|EFR96816.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 882

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 75/363 (20%), Positives = 135/363 (37%), Gaps = 33/363 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 357 VEPYLSLQWFVKMEPLASEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 415

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 416 GHRIPAWYHKETGEIYVGEKAPENISDWEQDEDVLDTWFSSALWPFSTMGWPDTENPDYK 475

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 476 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDAEGRKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 536 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVESTWN--FINKIWN-ASRFVLMNLN 592

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D           TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 593 DMKYNEIDLTNVTEVSDKWILTRLNETIQSVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 652

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +     T   V    +     LL  F+P +  +I+  L    E+     
Sbjct: 653 EIAK-ISLYGEDEVAKQTTRSVLAYTLNNTMRLLHPFMPFVTEEIWQNLPHEGESITVSE 711

Query: 489 LDQ 491
             Q
Sbjct: 712 WPQ 714



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  TDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 98  VEAKLKEDNISRYDLGRDNFIKKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDDGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 158 DAVKKVFVKLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 197


>gi|260589301|ref|ZP_05855214.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540382|gb|EEX20951.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 881

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 149/383 (38%), Gaps = 38/383 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M +  +F R+    +  +   ++     +P  R ++     
Sbjct: 338 VPHSHSVGTHDRCKTTVEPMIKPQWFVRMKEMGEAAIETLKNGELQFVPE-RFDKTYMHW 396

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
              ++D  +SR+ +                             G       +  +  W  
Sbjct: 397 LENIRDWCISRQLWWGHRIPAYYCDECGETVVAREMPEKCPKCGCTHLHQDEDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +     +   P    + 
Sbjct: 457 SALWPFSTLGWPEKTE-EMEYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKTPFHHVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERIEASRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
              AN + N  SR + M L+  D          T +D+ ILS  + + +E+ EN+    +
Sbjct: 576 --FANKVWN-ASRFIMMNLEKADIPKNIDLQTLTGADKWILSKVNTLAKEVTENLDKYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A+ +V   + E   D Y +  KP      +  +A+ +      V+     LL  ++P 
Sbjct: 633 GIAVQKVYDFIWEEFCDWYIEMVKPRLYNDEDTTKAAALW-TLKTVLSNALKLLHPYMPF 691

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +  +I+  L   +E+    +  +
Sbjct: 692 ITEEIYCTLCPEEESIMISAWPE 714



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 34  RDKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTDHAAIATEVK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++      +    L  S  +D    T ++   
Sbjct: 94  VIEKLKEQGIDKNEIGREEFLKHAWEWKEEYGGKIINQLKKLGASADWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              + ++ K+ +KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 154 KAVQEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPVAGEE 211


>gi|304316504|ref|YP_003851649.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778006|gb|ADL68565.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 878

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 146/374 (39%), Gaps = 38/374 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H  V+    + +F ++       L    +     +P  R  ++     + +KD  
Sbjct: 344 HCYRCHTTVEPFLSKQWFVKMEPLAKPALEAVRTGKIEFIPE-RFEKIYFNWLNNIKDWC 402

Query: 209 LSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           +SR+ +                             G K     + ++  W  +     +T
Sbjct: 403 ISRQLWWGHRIPAWYCDDCGYVTVSKDDPTCCEQCGSKNIHQDEDVLDTWFSSALWPFST 462

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D+ +  K  F+P D+ V G DI+ F    + + +      +P  + +        +
Sbjct: 463 MGWPDDTEDLK-YFFPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFKRVLIHGLVRDSQ 521

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+E+IE+ G D LR+ L+   A G D  +  D L+   N   AN + 
Sbjct: 522 GRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGNDMRFSDDKLEASRN--FANKLW 579

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V + L   D           +D+ IL+  + V++E+ EN++   +  A  ++  
Sbjct: 580 N-ASRYVMLNLTS-DDTTLYLENLNIADKWILTRLNNVVKEVTENLEKYELGIAAGKLYD 637

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     D Y +  KP  L   + +       V   V+     LL  F+P +  +IF  +
Sbjct: 638 FLWSEFCDWYIELSKP-VLYGDDLEAKKKTKSVLRYVLDNTLRLLHPFMPFITEEIFKNI 696

Query: 478 FVADENRCFQSLDQ 491
               E        +
Sbjct: 697 PHDGETIMLSKWPE 710



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            ++   I         Q H+GHA +  + D++ R+ R+ G   L+  G+D          
Sbjct: 33  SKKPFTIVIPPPNITGQLHMGHALDNTMQDIIIRWKRMQGYVALWIPGSDHASIATEVKV 92

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                            +        + ++      D    L  S D     F  T ++ 
Sbjct: 93  LDKIKEETGLTKRDIGREKFLEKAWQWKEKYENRILDQLKKLGSSCDWTRKRF--TMDEA 150

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++  +  KG IY+G     +    +   +D EV    +  +      P+
Sbjct: 151 LSKAVREVFVALYKKGLIYRGDRIINWCPSCKTALSDAEVEHEDESGHLWYIKYPI 206


>gi|319651731|ref|ZP_08005857.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396550|gb|EFV77262.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 881

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 75/405 (18%), Positives = 147/405 (36%), Gaps = 36/405 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L+DE      E +  + G    +    V+      +F ++    
Sbjct: 314 YQGMDRFECRKQIVKDLQDEGVLFKIEEHMHSVGHSERSGA-VVEPYLSTQWFVKMQPLA 372

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
           D+ ++      +     ER  +        ++D  +SR+   WG +I             
Sbjct: 373 DEAIALQTKEEKVNFVPERFEKTYLRWMENIRDWCISRQ-LWWGHRIPAWYHKETGEVFV 431

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +  + ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 432 GHEAPEDIENWEQDKDVLDTWFSSALWPFSTMGWPDTDSSDFKRYYPTAALVTGYDIIFF 491

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +        +G K+SKSLGN +DP++VI++ G D+LRYF
Sbjct: 492 WVSRMIFQGLEFTGERPFQDVLIHGLVRDSQGRKMSKSLGNGVDPMDVIDQYGADSLRYF 551

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G+D  +  + ++   N   AN I N  SR   M +           G  + +D
Sbjct: 552 LSTGSSPGQDLRFSMEKVEATWN--FANKIWN-ASRFALMNMDGLTYEEIDLSGEKSVAD 608

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+  +  ++ +               + + + +   D Y +  K P  L   +    
Sbjct: 609 KWILTRLNETIETVTRLSDRYEFGEVGRVLYNFIWDDFCDWYIEMAKLP--LYGEDEAAK 666

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            T   +   V+     LL  F+P +  +I+  L  + E+      
Sbjct: 667 KTTRSILAYVLDNTMRLLHPFMPFITEEIWQNLPHSGESITAAQW 711



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G      
Sbjct: 37  ETKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ + + R     L +  D      T ++   
Sbjct: 97  VEEKLRNDGKSRYDLGREKFVEETWKWKEEYASHIRQQWSKLGLGLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 157 KAVREVFVSLYNKGLIYRGEYIINWDPSTKTALSDIEVIY 196


>gi|323489964|ref|ZP_08095185.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396260|gb|EGA89085.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 877

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 149/407 (36%), Gaps = 37/407 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++        L+D     + E +  + G    +    V+      +F  +    
Sbjct: 311 YEGLDRFECRKQIVKDLQDMDVLFEIEEHIHSVGHSERSGA-VVEPYLSTQWFVDMQPLA 369

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
              +   ++        +R  +        ++D  +SR+   WG +I             
Sbjct: 370 AASVEAQKNGDGVNFVPDRFEKTYLHWMENIRDWCISRQ-LWWGHQIPAWYHNETNEIYV 428

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                         + ++  W  +     +T G+ +  D   ++++P D  V G DI+ F
Sbjct: 429 GHEAPADAENWTQDEDVLDTWFSSALWPFSTLGWPEEND-DLSRYYPTDALVTGYDIINF 487

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + + A   +   P    +        +G K+SKSLGN +DP++VI + G D+LRYF
Sbjct: 488 WVSRMIFQALEFTGEKPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDVISQYGADSLRYF 547

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G+D  Y  D ++   N   AN I N  SR   M ++          G  + +D
Sbjct: 548 LATASSPGQDLRYSNDKVESVWN--FANKIWN-ASRFALMNMEGMTYDQIDLSGKKSVAD 604

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
             IL+  +  ++++ E  +          + + + +   D Y +  K P  L   +    
Sbjct: 605 SWILTRLNETIEQVTELAERYEFGEVGRSLYNFIWDDFCDWYIEMSKLP--LYGEDERAK 662

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                V   V+     LL  F+P +  +I+  L    E+    +   
Sbjct: 663 KMTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITLAAWPT 709



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  SGKTPYTIVIPPPNVTGKLHLGHAWDTTLQDIMTRMKRMQGFDALWLPGMDHAGIATQAK 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + DQ + + R+    L +  D      T +    
Sbjct: 94  VEGKLKEEGRSRYDLGREAFLEESWKWKDQYAGHIREQWAKLGLGLDYSRERFTLDDGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ +K  IY+G Y   +    +   +D EV  
Sbjct: 154 KAVREVFVKLYEKKLIYRGKYIINWDPNTQTAISDIEVIH 193


>gi|327439439|dbj|BAK15804.1| valyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 880

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 145/408 (35%), Gaps = 37/408 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L++     + E +    G      +  V+    + +F +++   
Sbjct: 312 YAGMDRFECRKQIVADLQEAGVLIEIEPHVHQVGHS-ERTNAVVEPYLSKQWFVKMAPLA 370

Query: 174 DKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------ 220
           ++ L    + + +      R     +     + D  +SR+   WG +I            
Sbjct: 371 EEALKMQADENEKVNFVPNRFENTYNRWMENIHDWCISRQ-LWWGHQIPAWYNKETGELY 429

Query: 221 -----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                          + ++  W  +     +T  + +       +++P +  V G DI+ 
Sbjct: 430 VGKEAPEDAENWTQDEDVLDTWFSSALWPFSTMDWPNEESEMFKRYYPTNTLVTGYDIIF 489

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    + +     +   P    +        +G K+SKSLGN +DP++VI++ G D+LRY
Sbjct: 490 FWVSRMIFQGKEFTGERPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDVIDQYGADSLRY 549

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES 386
           FL    + G+D  Y  + ++   N    N I N  SR   M ++          G  + +
Sbjct: 550 FLATGSSPGQDLRYSTEKVESTWN--FVNKIWN-ASRFALMNMEGLTFEQIDLTGNLSTA 606

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDR 443
           D+ ILS  +  +  +              ++ + + +     Y +  K P  L   +   
Sbjct: 607 DKWILSRLNETIDRVTTLSDKYEFGEVGRELYNFIWDDFCSWYIEMAKLP--LYGEDEAA 664

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             T   V   V+     LL  F+P +  +I+  L    E+    +   
Sbjct: 665 KLTTRSVLAYVLDNTMRLLHPFMPFVTEEIWQHLPHEGESITVAAWPT 712



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 35  SDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAGIATQAK 94

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                     T  + ++ + + R     L +  D      T ++   
Sbjct: 95  VEEKLRGEGITRYDLGREKFLEKTWEWKEEYASHIRAQWSKLGLGLDYSKERFTLDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++ K+ +KG IY+G     +    +   +D EV  
Sbjct: 155 DAVKEVFVKLYEKGYIYRGERIINWDPAAKTALSDIEVIH 194


>gi|323487048|ref|ZP_08092357.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum
           WAL-14163]
 gi|323399639|gb|EGA92028.1| hypothetical protein HMPREF9474_04108 [Clostridium symbiosum
           WAL-14163]
          Length = 879

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 150/381 (39%), Gaps = 39/381 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F ++       +   +S     +P       + ++
Sbjct: 336 VPHAHNVGTHDRCGTTVEPMVKPQWFVKMDEIAKPAIEALQSGRLKFVPESFGKTYLHWL 395

Query: 201 KSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWI 232
           + G++D  +SR+   WG +IP                               +  +  W 
Sbjct: 396 E-GIRDWCISRQ-LWWGHRIPAYYCEECGEMTVAKTTPAVCAKCGSTHLHQDEDTLDTWF 453

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +        F+P D+ V G DI+ F    + +     +   P    +
Sbjct: 454 SSALWPFSTLGWPEKTP-EFEYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKEPFHTVL 512

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   
Sbjct: 513 IHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRMTLMTGNAPGNDMRFYWERVEASR 572

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N  +R + M ++       +    T +D  ILS  + + +++ ENM    +
Sbjct: 573 N--FANKVWN-ATRFIMMNIEKAPDADVSLSDLTMADRWILSKVNTLAKDVTENMDRYEL 629

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             AL +V   + E   D Y +  KP  L   N    +  L+    V+     LL  ++P 
Sbjct: 630 GIALQKVYDFIWEEFCDWYIEMVKP-RLWDDNDTTKAAALWTLKTVLINSLKLLHPYMPF 688

Query: 469 LANKIFDILFVADENRCFQSL 489
           +  +IF  L   + +    S 
Sbjct: 689 ITEEIFCNLQDEEPSIMISSW 709



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 18/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KNKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGFEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +   +                   + +            L  S  +D    T ++   
Sbjct: 93  VIDKLKSEGIDKHDLGRDKFLEKAWEWKEDYGSRIVKQLHKLGSSADWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           D    ++ K+ +KG IYKG     +    +   +D EV       ++   + P+   E+ 
Sbjct: 153 DAVLEVFTKLYEKGYIYKGSRIINWCPICQTSISDAEVEHEEQDGFFWHINYPIVGEEDR 212


>gi|283470931|emb|CAQ50142.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 876

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 136/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P ++ V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNVLVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    E     
Sbjct: 648 EMSKIP--MNGNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHQGETIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|257440904|ref|ZP_05616659.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257196684|gb|EEU94968.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 901

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/394 (21%), Positives = 159/394 (40%), Gaps = 40/394 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +  + E  K   G  Y   H+ ++ M  + +F ++       +   E      +P 
Sbjct: 351 KEGGFLKEIEPLKHEVGTCYR-CHSTIEPMVSKQWFVKMEPLAKPAIESVEKGEIKFVPE 409

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------- 221
                 ++++K G +D  +SR+   WG +IP                             
Sbjct: 410 RFTKNYLNWMK-GTRDWCISRQ-LWWGHQIPAFYCNDCGETVVAKEMPCTCPKCGGSHFT 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP   +  W  +     +T G+ +        F+P +  V G DI+ F    + +    
Sbjct: 468 QDPD-TLDTWFSSALWPFSTLGWPNEDSADLKYFYPTNTLVTGYDIIGFWVSRMIFSGLA 526

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P             +G K+SKSLGN IDP+EVI + G DALR+ L+     G D 
Sbjct: 527 YTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLLDGSTPGNDM 586

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            Y +  ++   N   AN + N     +  + +D+   +P       SD+ +L+  ++V  
Sbjct: 587 RYSEKKVEAARN--FANKLWNATRFVLMNLPEDFQPGLPEESKLDMSDKWVLTKLNQVAG 644

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            + +N+ +  +  A A++ S + +   D + +  KP  L   + ++A T   V V V+ +
Sbjct: 645 AMTDNLDHFEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTARRVLVYVLDK 703

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              LL  F+P +  +++  L  + E    QS   
Sbjct: 704 ALKLLHPFMPFITEELYQALPGSAETIMTQSWPT 737



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + DVL R  R+ G   L+  GTD          
Sbjct: 34  DKKPYTIVMPPPNVTGQLHMGHALDNTMQDVLIRTKRMQGYAALWVPGTDHASIATEAKV 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      +  +           L  S D      T ++   D
Sbjct: 94  VEAMRAEGLTKEMVGRDGFLERAWDWKTKYGNRIVSQLKKLGTSCDWQRERFTMDEGCSD 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ DKG IY+G     +        +D EV        +     PV
Sbjct: 154 AVKEVFVRLYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGNFWHLLYPV 206


>gi|314936231|ref|ZP_07843578.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654850|gb|EFS18595.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 876

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 134/355 (37%), Gaps = 34/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQQALDNQKTDNRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 410 GHQIPAWYHNETGEVYVGEEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPNEEAKDYQ 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++P ++ V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 HYYPTNVLVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIEKYGADSLRYFLATGSSPGNDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  ++ +    +          + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIETVTNLSEKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +  K P  +   +  +  T   V    + Q+  +L  F+P +  KI+  L    E
Sbjct: 648 EMSKIP--MNGEDESQKQTTRSVLSYTLDQIMRMLHPFMPFVTEKIWQSLPHEGE 700



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + RE   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  ESREAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 60  -----------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +       + K  +     + +  +   LD S + F  T +  
Sbjct: 92  VDAKLKEQGISRHDIGREKFLEHAWSWKEEYASFIRKQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
                R ++  + +KG IY+G     +        +D EV      G +Y+ ++
Sbjct: 150 LSKAVRKVFVDLYNKGIIYRGERIINWDPVARTALSDIEVIHEDVQGHFYHFKY 203


>gi|242373956|ref|ZP_04819530.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348310|gb|EES39912.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 887

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 362 VEPYLSTQWFVKMKPLAQRALDNQKTDDRIDFFPGRFENTFNRWMEEIRDWTISRQ-LWW 420

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 421 GHQIPAWYHKETNEIYVGEEAPKDIENWVQDEDVLDTWFSSALWPFSTLGWPDTDSEDFK 480

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 481 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 540

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 541 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 598

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  ++ + E             + + + +   D Y 
Sbjct: 599 DFKVEDIDLSGELSLADKWILTRLNETIKTVTELSDKYEFGEVGRALYNFIWDEFCDWYI 658

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   +  +  T   V   V+ ++  +L  F+P +   I+  L    E     
Sbjct: 659 EMSKIP--MNSDDETQKQTTRSVLSYVLDKIMKMLHPFMPFVTETIWQSLPHEGETIVNA 716

Query: 488 SLDQ 491
           S   
Sbjct: 717 SWPT 720



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 43  KSKDTYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 102

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +     + +  +   LD S + F  T ++ 
Sbjct: 103 VEAKLNEQGISRHDLGRDKFLEQAWDWKEEYASFIRQQWAKLGLGLDYSRERF--TLDEG 160

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + +KG IY+G     +  +     +D EV  
Sbjct: 161 LSKAVRKVFVDLYNKGIIYRGERIINWDPQARTALSDIEVIH 202


>gi|227518203|ref|ZP_03948252.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074359|gb|EEI12322.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 880

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEVAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGVSRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|168183482|ref|ZP_02618146.1| valine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796619|ref|YP_002864171.1| valyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673388|gb|EDT85349.1| valine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262502|gb|ACQ53535.1| valine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 881

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 93/480 (19%), Positives = 177/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIEVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPTKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFAGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   N +       V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGENEEAKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|257417812|ref|ZP_05594806.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257159640|gb|EEU89600.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 880

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 131/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ +       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I++ +    E+
Sbjct: 652 MSK-EILYGDNEVAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGES 704



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|254993780|ref|ZP_05275970.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 885

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 134/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 417 GHRIPAWYHKETGEIYVGESEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|46907782|ref|YP_014171.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|47093088|ref|ZP_00230865.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224153|ref|YP_002758260.1| valyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824389|ref|ZP_05229390.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852176|ref|ZP_05241524.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931492|ref|ZP_05264851.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255521286|ref|ZP_05388523.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764782|ref|ZP_07074772.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403272|sp|Q71ZB6|SYV_LISMF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46881051|gb|AAT04348.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018528|gb|EAL09284.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876615|emb|CAS05324.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258605480|gb|EEW18088.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583044|gb|EFF95076.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593624|gb|EFG01385.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514458|gb|EFK41515.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328465587|gb|EGF36816.1| valyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 883

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 134/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 417 GHRIPAWYHKETGEIYVGESEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|260220414|emb|CBA27928.1| Methionyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 547

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 99/363 (27%), Positives = 156/363 (42%), Gaps = 21/363 (5%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           +     F  +  QD  L    ++        R N        GL D  +SR    +GI+I
Sbjct: 22  DPRCVEFLENWTQDGKLQPEVANKIKEWFSVRTN-PDGTQSEGLGDWDISRDAPYFGIEI 80

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-------------PADLHVIGKDI 267
           PD P    YVW+DA   YL +     +  G KAK                   H IGKDI
Sbjct: 81  PDAPGKYFYVWLDAPVGYLASLKNWFDKGGPKAKHGDTRSFDEYMAASDTEQYHFIGKDI 140

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIE-EVGVDAL 325
           + FH ++WPA L  +    P  VF HGF+  + GEK+SKS G  +DP++ +   +  + L
Sbjct: 141 VTFHTLFWPAMLKFSGRKTPNNVFVHGFLTVNNGEKMSKSRGTGLDPLKYLSLGMNAEWL 200

Query: 326 RYFLVREIAC-GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           RY+L  +++   +D  ++ D    RVN+DL     N+ SR+   I K +DG +     F 
Sbjct: 201 RYYLAAKLSARNEDIDFNADDFMARVNSDLIGKYVNIASRAAGFITKRFDGKLT--SDFG 258

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPD 442
            +  ++L+        + +  + +   +A  +++ L  +V+ Y D  KPW+L K   N  
Sbjct: 259 PTGAALLAEVRGASDALAQMYEAREYGKATREIMLLADKVNAYVDQNKPWDLAKDVANNQ 318

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
               V  V +     L   L   +P LA  +   L V  +        Q ++P   L + 
Sbjct: 319 ALHQVCSVLINTFATLTRYLSPVLPGLAQAVQGFLGVDMQQWNVAGDVQAIQPYQHLMQR 378

Query: 503 FDP 505
             P
Sbjct: 379 VTP 381


>gi|291547952|emb|CBL21060.1| valyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 884

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 84/383 (21%), Positives = 148/383 (38%), Gaps = 40/383 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M +  +F ++       +   +      +P  R ++     
Sbjct: 338 VPHSHSVGTHDRCGTTVEPMIKPQWFVKMDEMAKAAIKTLDDGKLQFVPA-RFDKTYLHW 396

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
              ++D  +SR+ +                             G       +  +  W  
Sbjct: 397 LENIRDWCISRQLWWGHRIPAYYCDECGEMVVGREMPEKCPKCGCTHMHQDEDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D        F+P D+ V G DI+ F    + + A   +   P    + 
Sbjct: 457 SALWPFSTLGWPDKTP-ELEYFYPTDVLVTGYDIIFFWVIRMVFSALEQTGETPFHHVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERVESSRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLI 410
              AN I N  SR + M L+      P    A    D+ ILS  + V++++ ENM    +
Sbjct: 576 --FANKIWN-ASRFIMMNLEGKTVTAPEDLNALCNEDKWILSRLNTVIRDVTENMDKYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             A+ +V   + +   D Y +  K   W+  + NP  A+  L+     + Q   LL  F+
Sbjct: 633 GIAVQKVYDFLWDELCDWYIEMAKVRLWK-AEENPAAANDALWTLRTALTQGLKLLHPFM 691

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +  +I+  L   +E+      
Sbjct: 692 PFITEEIYCTLLPEEESIMISDW 714



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD          
Sbjct: 35  DKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTDHAAIATEVKV 94

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + ++      +    L  S  ++    T ++    
Sbjct: 95  TEKLRKEGIDKNEIGRDEFMKHAWAWKEEYGGKIINQLKKLGASADWERERFTMDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             + ++ ++ +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 155 AVQEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVVHEDQDGFFWHINYPIVGEE 211


>gi|313618762|gb|EFR90666.1| valyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 882

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 136/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 357 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 415

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 416 GHRIPAWYHKETGEIYVGENEPENLDQWEQDEDVLDTWFSSALWPFSTMGWPDTENPDYK 475

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 476 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 536 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVESTWN--FINKIWN-ASRFVLMNLD 592

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 593 GMKYDEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 652

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 653 EIAKIP--LYGEDEVAKQTTRSVLAYTLNTTMRLLHPFMPFVTEEIWQNLPHEGESITIS 710

Query: 488 SLDQ 491
           +  +
Sbjct: 711 NWPE 714



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  SDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 98  VEAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 158 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 197


>gi|16800655|ref|NP_470923.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526882|sp|Q92BG2|SYV_LISIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16414074|emb|CAC96818.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 882

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 136/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 357 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 415

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 416 GHRIPAWYHKETGEIYVGENEPENLDQWEQDEDVLDTWFSSALWPFSTMGWPDTENPDYK 475

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 476 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 536 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVESTWN--FINKIWN-ASRFVLMNLD 592

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 593 GMKYDEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 652

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 653 EIAKIP--LYGEDEVAKQTTRSVLAYTLNTTMRLLHPFMPFVTEEIWQNLPHEGESITIS 710

Query: 488 SLDQ 491
           +  +
Sbjct: 711 NWPE 714



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  SDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 98  VEAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 158 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 197


>gi|187776915|ref|ZP_02993388.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC
           15579]
 gi|187775574|gb|EDU39376.1| hypothetical protein CLOSPO_00454 [Clostridium sporogenes ATCC
           15579]
          Length = 881

 Score =  203 bits (515), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 94/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y +  R      +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPQINVMFDDGRINY-EETRYHGMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   +      +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEPLAKPAIEVVKEKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTKEPTKCPKCNSEKLEQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVIEE G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIEEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   N +       V  +V+     LL   +P +  +I+  L+   E+       Q
Sbjct: 657 KP-VLYGENEEAKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPQ 715



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKTPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGFSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRGKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|226950593|ref|YP_002805684.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841749|gb|ACO84415.1| valine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 881

 Score =  203 bits (515), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 175/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++     ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCDTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIDVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPKKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLNKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|331092376|ref|ZP_08341202.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401400|gb|EGG80986.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 882

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 156/381 (40%), Gaps = 37/381 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++  H  V+ + ++ +F ++       ++  ++     +P  R N+       
Sbjct: 339 HTHNVGTHDRCHTTVEPLIKQQWFVKMEELAKPAINALKTGELKFVPE-RFNKTYLHWLE 397

Query: 203 GLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDAL 235
            ++D  +SR+ +                             G       +  +  W  + 
Sbjct: 398 NIRDWCISRQIWWGHRIPAYYCDECGEFVVAREMPEKCEHCGCTHFTQDEDTLDTWFSSA 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +T G+ D+ +     F+P D+ V G DI+ F    + +  F  +   P        
Sbjct: 458 LWPFSTLGWPDSTE-ELDYFYPTDVLVTGYDIIFFWVIRMVFSGFAHTGKSPFHTVFIHG 516

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN IDP+E+IE+ G DALR  LV   A G D  +  + ++   N +
Sbjct: 517 LVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRMTLVTGNAPGNDMRFYDERVEA--NRN 574

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            AN + N  SR + M +++ +   P+    T +D+ ILS  + + +++ ENM    +  A
Sbjct: 575 FANKVWN-ASRFIMMNMEEKEITTPSESDLTATDKWILSKVNTLAKDVTENMDKFELGIA 633

Query: 414 LAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           L +V   + +   D Y +  K        +   A+  L+    V+     +L  ++P ++
Sbjct: 634 LQKVYDFIWDEFCDWYIELAKYRIYHADDDAVSANAALWTLKTVLANGLKMLHPYMPFVS 693

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L   +E+    S  +
Sbjct: 694 EEIYSALVPEEESLMMSSWPE 714



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   I         + H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 34  RSRKPFTIVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWIPGTDHAAISTEVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                    T  + ++           L  S  +D    T ++   
Sbjct: 94  VTNQLKEEGIDKKELGREGFLKRTWEWKEEYGGTITSQLKKLGTSCDWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                ++ K+ ++G IYKG     +    +   +D EV       ++     P+
Sbjct: 154 KAVEEVFIKLYEEGYIYKGSRIINWCPVCKTSLSDAEVEHEEQAGHFWHIKYPI 207


>gi|241894967|ref|ZP_04782263.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871685|gb|EER75436.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 888

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 136/368 (36%), Gaps = 35/368 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L+  +S         R     +     + D  +SR+   W
Sbjct: 360 VESRLSTQWFVKMKPLAEQALAMQKSDDRVDFYPPRFEGTFTRWMDDIHDWVISRQ-LWW 418

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 419 GHQIPAWYHKETGEMYVGMEAPADAENWEQDSDVLDTWFSSALWPFSTMGWPDTDAEDFK 478

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 479 RYFPTDTLVTGYDIIFFWVARMMFQSKEFTGRRPFKNVLIHGLIRDEQGRKMSKSLGNGI 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL      G+D  +    +    N    N I N     +  +  
Sbjct: 539 DPMDVIEKYGADALRWFLATGSTPGQDVRFSYTKMDSAWN--FINKIWNASRYVLMNLSD 596

Query: 372 DYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D    +P      + +D+ ILS  +  +  + +N        A   + + +     D Y 
Sbjct: 597 DTKAELPADRTKLSLADQWILSRLNATIAAVTKNFDKFEFGEAGRALYNFIWNDFADWYI 656

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NRC 485
           +  K   L   + D  +TV  +   V+     LL   +P +   I+  +    E      
Sbjct: 657 EMTK-ETLNGDDADAQTTVQSILAYVLDNTLRLLHPIMPFVTEAIWQEMPHEGETIVTAT 715

Query: 486 FQSLDQRL 493
           + ++D+ L
Sbjct: 716 YPTVDETL 723



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  KKARPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + ++ +   +     L +S  YD    T ++   
Sbjct: 95  VEQRLAEDGISRYDLGREKFVEQVWDWKNEYAATIKSQWGKLGLSLDYDRERFTLDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 155 EAVRKVFVTLYEKGLIYRGEYIINWDPKARTALSDIEVIHQDD 197


>gi|16803592|ref|NP_465077.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501508|ref|ZP_03669815.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508987|sp|Q8Y6X9|SYV_LISMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16410981|emb|CAC99630.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 883

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|47096717|ref|ZP_00234302.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898281|ref|ZP_05258205.1| valyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912226|ref|ZP_05262238.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936554|ref|ZP_05268251.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014901|gb|EAL05849.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609148|gb|EEW21756.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590201|gb|EFF98535.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 883

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|290893953|ref|ZP_06556929.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556491|gb|EFD90029.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 883

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 135/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENPDFK 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYSEIDLTKVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIS 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPE 715



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKEENISRYDLGREKFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|217964301|ref|YP_002349979.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333571|gb|ACK39365.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571133|emb|CAR84312.1| valyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 884

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 135/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 359 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 418 GHRIPAWYHKETGEIYVGENEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTENPDFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 478 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 538 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 594

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 595 GMKYSEIDLTKVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 654

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 655 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIS 712

Query: 488 SLDQ 491
              +
Sbjct: 713 EWPE 716



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 40  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 99

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 100 VEAKLKEENISRYDLGREKFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 159

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 160 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 199


>gi|257077439|ref|ZP_05571800.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779640|ref|ZP_06745031.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307269913|ref|ZP_07551239.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256985469|gb|EEU72771.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453297|gb|EFG21708.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306513703|gb|EFM82309.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
          Length = 880

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 130/354 (36%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ D       
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 534 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 591

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 592 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 651

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I+  +    E+
Sbjct: 652 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWGKIPHQGES 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T ++   
Sbjct: 96  VEEKLAQQGISRYDLGREKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 156 EAVRKVFVSLYEKDLIYRGEYIINWDPKAKTALSDIEVIH 195


>gi|254831953|ref|ZP_05236608.1| valyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 883

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|295695330|ref|YP_003588568.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410932|gb|ADG05424.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 890

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/386 (20%), Positives = 146/386 (37%), Gaps = 39/386 (10%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           Y +          +    H  V+    E +F ++    +  +   ++     +P  R  +
Sbjct: 341 YLERVEPHRHAVGHCQRCHTVVEPFLSEQWFVKMKPLAEPAIEAVKAGRVRFVPE-RFEK 399

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------I 227
           +       ++D  +SR+   WG +IP              +DP++              +
Sbjct: 400 LYLHWVDNVRDWCISRQ-LWWGHRIPAWYCEGCGETIVAAEDPEHCPRCGSRQLRQEEDV 458

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +  +  + +++P D+ V G DI+ F    + + +   +  +P
Sbjct: 459 LDTWFSSALWPFSTMGWPEETEDLR-RYFPTDVLVTGFDIIYFWVARMIFMSLAFTGEVP 517

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                        +G K+SKSLGN IDP++V+ + G DALR+ L    A G D  +  + 
Sbjct: 518 FHTVYIHGLVRDSQGRKMSKSLGNGIDPLDVVNKYGADALRFMLASGTAPGNDQRFYWEK 577

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           ++       AN I N     +  + K+  G +         +  IL   +  ++++ E +
Sbjct: 578 VESA--RHFANKIWNAARFVLLNVDKEVGGDL-KGAVLGRPEHWILHRLNETVRDVTEAL 634

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +N     A       V     D Y +  K   L   NP  A     V V V+ +   LL 
Sbjct: 635 ENFDFGGAAKVAYDFVWGEFCDWYIEFSKA-ALYGENPLAARGTRQVLVHVLDRALRLLH 693

Query: 464 AFVPKLANKIFDILFVADENRCFQSL 489
            F+P L  +I+  L    E       
Sbjct: 694 PFMPFLTEEIWQKLPGHGEALVVAEW 719



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + +   I           H+GHA +  + D+L RF R+ G D L+  GTD  G     
Sbjct: 41  VPDGKPFTIVIPPPNVTGALHMGHALDFTLQDILIRFRRMQGRDALWLPGTDHAGIATQN 100

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         +  Q           L  S D      T ++ 
Sbjct: 101 RVEAMLLKETGQSRHDIGRDAFVEKVWEWKRQYGSIITTQIQALGFSCDWSRERFTMDEG 160

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++ ++G IY+G Y   +  R     +D EV  
Sbjct: 161 LSRAVREVFVRLYERGLIYRGKYIINWCPRCRTALSDIEVEH 202


>gi|257425780|ref|ZP_05602204.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428446|ref|ZP_05604844.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431080|ref|ZP_05607457.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433763|ref|ZP_05610121.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436679|ref|ZP_05612723.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282904236|ref|ZP_06312124.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906061|ref|ZP_06313916.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908976|ref|ZP_06316794.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282914461|ref|ZP_06322247.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919430|ref|ZP_06327165.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924807|ref|ZP_06332473.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958416|ref|ZP_06375867.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503539|ref|ZP_06667386.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510553|ref|ZP_06669258.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537096|ref|ZP_06671776.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428236|ref|ZP_06820865.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590801|ref|ZP_06949439.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|257271474|gb|EEV03620.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275287|gb|EEV06774.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278028|gb|EEV08676.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281856|gb|EEV11993.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284030|gb|EEV14153.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313173|gb|EFB43569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317240|gb|EFB47614.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321642|gb|EFB51967.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282327240|gb|EFB57535.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331353|gb|EFB60867.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595854|gb|EFC00818.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790565|gb|EFC29382.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919941|gb|EFD97009.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095205|gb|EFE25470.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466444|gb|EFF08965.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295127636|gb|EFG57273.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575687|gb|EFH94403.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|315195567|gb|EFU25954.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 876

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    E     
Sbjct: 648 EMSKIP--MNGNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGETIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|229918362|ref|YP_002887008.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469791|gb|ACQ71563.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 883

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 119/326 (36%), Gaps = 18/326 (5%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           EG + R            +      +P    NE                       +   
Sbjct: 396 EGTYLRWMENIRDWCISRQLWWGHRIPAWYHNETGEVYVGKEAPADS---------ENWT 446

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ D       +++P    V G DI+ F    + + +   
Sbjct: 447 QDEDVLDTWFSSALWPFSTMGWPDADAPDFNRYFPTSALVTGYDIIFFWVSRMIFQSLEF 506

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +        +G K+SKSLGN +DP+EVI++ G D+LR+FL+     G D  
Sbjct: 507 TGKQPFNDVLIHGLIRDSEGRKMSKSLGNGVDPMEVIDQYGADSLRWFLLTGSTPGNDLR 566

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQ 399
           +  + ++   N   AN I N  SR   M +           G  T +D+ IL+  +  + 
Sbjct: 567 FYWEKIESTWN--FANKIWN-ASRFALMNMDGLKVEDIDLTGEKTLADKWILTRLNDTID 623

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++   +       A   + + + E   + Y +  K   L   +     T   V    +  
Sbjct: 624 QVTRLVDKYEFGEAGRYLYNFIWEEFCNWYIEMAK-LTLYGEDEAAKHTTRSVLAHTLDS 682

Query: 458 LAILLQAFVPKLANKIFDILFVADEN 483
           +  L+  F+P L  +I+  L    ++
Sbjct: 683 IMRLMHPFMPFLTEEIWQHLPHEGDS 708



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 40  SKQPYTIVIPPPNVTGKLHLGHAWDTTLQDLLTRLKRMQGYDVLWLPGMDHAGIATQAKV 99

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     T  + D+ ++  RD    L +  D      T ++    
Sbjct: 100 EQKLREEGVMRYDLGREKFLEKTWEWKDEYAKTIRDQWSKLGLGLDYSRERFTLDEGLSK 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IY+G Y   +    +   +D EV  
Sbjct: 160 AVQEVFVRLYEKGLIYRGEYIVNWDPAQKTAVSDIEVIY 198


>gi|313623634|gb|EFR93795.1| valyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 874

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 136/364 (37%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 349 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 407

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 408 GHRIPAWYHKETGEIYVGENEPENLDQWEQDEDVLDTWFSSALWPFSTMGWPDTENPDYK 467

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 468 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 527

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 528 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVESTWN--FINKIWN-ASRFVLMNLD 584

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 585 GMKYDEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 644

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 645 EIAKIP--LYGEDEVAKQTTRSVLAYTLNTTMRLLHPFMPFVTEEIWQNLPHEGESITIS 702

Query: 488 SLDQ 491
           +  +
Sbjct: 703 NWPE 706



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 30  TDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 90  VEAKLKEENISRYDLGREKFVDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 150 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 189


>gi|224499788|ref|ZP_03668137.1| valyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 883

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|163791284|ref|ZP_02185698.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873425|gb|EDP67515.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 877

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 135/356 (37%), Gaps = 35/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  ++    + +    +  +     ER           + D  +SR+   W
Sbjct: 351 VEPRLSTQWFVNMAPLAKEAIESQGTEDKVNFVPERFENTYMRWMENVHDWVISRQ-LWW 409

Query: 217 GIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +I                          DP  ++  W  +     +T G+ D      
Sbjct: 410 GHRIPAWYHKTSGELYVGMEAPEDSENWMQDPD-VLDTWFSSALWPFSTMGWPDEESEDF 468

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 469 KRYFPTNTLVTGYDIIFFWVSRMMFQSLEFTGKRPFNNVLIHGLIRDTEGRKMSKSLGNG 528

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VIE+ G DALR+FL    A G+D  +  D +    N    N I N  SR   M +
Sbjct: 529 IDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-ASRFALMNM 585

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +D+        G  T +D  IL+  +  ++++ +  +      A   +   + +   D Y
Sbjct: 586 EDFTVDQIDLTGEKTVADRWILTKLNETVEKVTDLFERFEFGEAGRHLYHFIWDDFCDWY 645

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   +         +   V+ Q   LL   +P +  +I++ +    E+
Sbjct: 646 IEMSK-EVLFGEDETAKQMTRSILAYVLDQTLRLLHPIMPFVTEEIWENIPHEGES 700



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   +         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KTKEPYSVVIPPPNVTGKLHLGHAWDTTLQDIIVRQKRMQGYDTLWLPGMDHAGIATQAK 91

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                    T   + ++ +   R+    + IS D      T +    
Sbjct: 92  VEAKLAEDGISRYDLGREKFIDTVWDWKEEYASVIREQWAKVGISVDYSRERFTLDDGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +K  IY+G Y   +  + +   +D EV  
Sbjct: 152 EAVRKVFVTMYNKKLIYRGEYIINWDPKAKTALSDIEVIH 191


>gi|85859788|ref|YP_461990.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722879|gb|ABC77822.1| valyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 887

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 94/415 (22%), Positives = 156/415 (37%), Gaps = 44/415 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L+++ Y    E Y    G+ Y  + + ++    + +F R+    
Sbjct: 312 YQGQDRYECRKNIVADLKEQGYLVSVEPYMHNVGKCYRCKTD-IEPYVSKQWFVRIKPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              +S        I+P         ++   ++D  +SR+   WG +IP            
Sbjct: 371 KAAISAVVKGKTRIIPPMWEATYYEWMN-NIRDWCISRQ-IWWGHRIPVWTCESCGRMIV 428

Query: 222 --DDPQ--------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
              DP                ++  W  +     +T G+ D     K  F+P  L + G 
Sbjct: 429 STQDPDACPDCGSNELRQEEDVLDTWFSSALWPFSTLGWPDRTPALKT-FYPTSLLITGF 487

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DIL F    +      +  ++P             KGEK+SKS GN IDP+++I++ G D
Sbjct: 488 DILFFWVARMMMMGKYIMKDVPFRDVYLHALVRDEKGEKMSKSKGNSIDPLDMIDKYGTD 547

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-- 381
           A R+ L    A G+D    ++ ++        N I N    S+ M L+DY       G  
Sbjct: 548 AFRFTLAAFSAQGRDVRMSEERIEG--YKFFVNKIWNAARFSL-MNLEDYPAEGAAAGRE 604

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  ILS   R   E+  ++     + A A V S       D Y +  KP    K 
Sbjct: 605 EKSLKDRWILSRLQRTTAEVVRSLDEYRFNDAAAAVYSFFWHEFCDWYLELIKPTLYGKE 664

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQ 491
            P+          EV++    LL  F+P +  +I+  L     +     F SLD+
Sbjct: 665 TPEERMAAQLTLKEVLKNGLKLLHPFMPFITEEIWQKLTQDGTSIMVSPFPSLDE 719



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I           H+GHA    + D++ RF R+ G + L+  G D  G       
Sbjct: 36  EKPPFSIVIPPPNVTGILHMGHALNNTLQDIIVRFKRMQGYNTLWMPGMDHAGIATQNVV 95

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
           +                        +  +      +    L  S D   +  T ++    
Sbjct: 96  EKELAREGLTRHDLGREKFIERVWEWKAKYGGVIINQLKRLGCSCDWERQRFTMDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ ++     IY+G Y   +  R     +D EV    +         P+
Sbjct: 156 AVREVFVRLYQDDLIYQGDYIVNWCPRCHTAISDLEVEYKEEAGSLWNIRYPL 208


>gi|49483906|ref|YP_041130.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|81650951|sp|Q6GG42|SYV_STAAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49242035|emb|CAG40734.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
          Length = 876

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    E     
Sbjct: 648 EMSKIP--MNGNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGETIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|284801943|ref|YP_003413808.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995085|ref|YP_003416853.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057505|gb|ADB68446.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060552|gb|ADB71491.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 883

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|166031702|ref|ZP_02234531.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC
           27755]
 gi|166028679|gb|EDR47436.1| hypothetical protein DORFOR_01402 [Dorea formicigenerans ATCC
           27755]
          Length = 884

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/490 (18%), Positives = 184/490 (37%), Gaps = 49/490 (10%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY 91
           D++ +  +L   D       D +  K         +T     +      R     L+I  
Sbjct: 241 DIVGKMCKLPLTDREIPIVADYYVDK-EFGTGAVKITPAHDPNDFEVGKRHNLPELNIMN 299

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           DD           T    +       D Y+   +    L+++ Y     V    +   ++
Sbjct: 300 DD----------ATINEKYGGKYAGMDRYEARKAMVEDLKEQGYLV-KVVPHSHNVGTHD 348

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
             H  V+ M ++ +F ++       +   ++     +P  R +++       ++D  +SR
Sbjct: 349 RCHTTVEPMIKQQWFVKMEELAKPAIEAIKNGELKFVPE-RFDKIYLHWLENIRDWCISR 407

Query: 212 KTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           + +                             G       +  +  W  +     +T G+
Sbjct: 408 QIWWGHRIPAYYCQDCGEVVVASEAPEKCPHCGCTHFKQDEDTLDTWFSSALWPFSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
               +     F+P ++ V G DI+ F    + +  +  +   P    +        +G K
Sbjct: 468 PHETE-DLDYFYPTNVLVTGYDIIFFWVIRMVFSGYAHTGKAPFNTVLIHGLVRDSQGRK 526

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN IDP+++I++ G DALR  L+   A G D  +  + ++   N   AN + N  
Sbjct: 527 MSKSLGNGIDPLDIIDQYGADALRMTLITGNAPGNDMRFYNERVEASRN--FANKVWN-A 583

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR + M ++  +   P       +D  ILS C+ V++++ EN+    +  AL+++   + 
Sbjct: 584 SRYILMNMEGKEITEPQAEDLGPADRWILSACNNVVKDVTENLDKFELGIALSKIYDFIW 643

Query: 423 E--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +   D Y +  K        NP  A+  L+   +V+     LL  ++P +  +I+  L  
Sbjct: 644 DEFCDWYIELSKYAIYHADENPKSANAALWTLKKVLGDALKLLHPYMPFVTEEIYSKLVP 703

Query: 480 ADENRCFQSL 489
            +E+    S 
Sbjct: 704 EEESLMMSSW 713



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 34  RSKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRYKRMQGYNALWIPGTDHAAISTEVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                    T  + ++           + +S  +D    T ++   
Sbjct: 94  VTNQLKDEGIDKKELGREKFLERTWQWKEEYGGTITSQLKKMGVSCDWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +    ++  +  KG IY+G     +    +   +D EV       ++     P+
Sbjct: 154 EAVEKVFLNLHKKGFIYRGSRIINWCPVCKTSLSDAEVEHEEQDGFFWHIKYPI 207


>gi|168179187|ref|ZP_02613851.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670164|gb|EDT82140.1| valyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 881

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIEVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPTKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|145480273|ref|XP_001426159.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393232|emb|CAK58761.1| unnamed protein product [Paramecium tetraurelia]
          Length = 842

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 46/431 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+T + Y NAQPHIGH Y MI AD +A++       V   TGTDEHG K+ ++A+N 
Sbjct: 393 KQIITTPLFYVNAQPHIGHLYSMIYADAIAKYK-----SVKLLTGTDEHGLKVYRSAKNQ 447

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +  + + D  S  F+ +A+   I YD F+RTT+ +H    +  W  + + G I K  Y 
Sbjct: 448 PI--QQYCDSISNQFQQLANSF-IKYDHFVRTTDPQHIMKVQKNWNLLQNNGFILKDTYK 504

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           G+Y   +E++ N                H   Q++EEE YFF+           Y     
Sbjct: 505 GYYCQVEESFVN----------------HKTDQYLEEENYFFKFDK-------DYLETCI 541

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
              P   +NE +  +      +S  ++ + WGI++P+D   ++YVW+DAL  YL    + 
Sbjct: 542 TKAPSRYQNE-LKQLIINSICISRPKQRYYWGIEVPNDANQLIYVWLDALLGYLQEEQHH 600

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                         +HVIGKDI+RFHA+YWP+FL   N     ++  H   +    K+SK
Sbjct: 601 Y-------------MHVIGKDIVRFHALYWPSFLKGINNQSTTELIVHNHWIRNNMKMSK 647

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNVIDP ++++    + +R + + +     D  +++  L+K  N    +   N++ R 
Sbjct: 648 SLGNVIDPFQLLKTYNQNQIRLYFLTQGPQNMDVSFEEQKLEKCWNT-YIDQFNNILFRL 706

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
               +   + ++       +           + +  +  +   L      ++  +   ++
Sbjct: 707 FRPKIISPNLLLLQQHLLDDQLLQSKQTFLELHKNTKALLDKNLFIEGYLELQKIFVLIN 766

Query: 426 RYFDAQKPWEL 436
              D  +PW++
Sbjct: 767 TLIDKYQPWKM 777


>gi|290969030|ref|ZP_06560565.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780986|gb|EFD93579.1| valine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 886

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 148/377 (39%), Gaps = 41/377 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +  H  ++    + +F ++       L+   +     +P  R  ++ +     L D  
Sbjct: 348 HCSRCHTTIEPFSTKQWFVKMKPLTAAALNAVTTGKTQFVPD-RFAKIYNHWLENLHDWC 406

Query: 209 LSRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTNYL 239
           +SR+   WG +IP                              DP  ++  W  +     
Sbjct: 407 ISRQ-LWWGHQIPAWYCDDCGQTTVSREDVGTCAHCGSTHITRDPD-VLDTWFSSALWPF 464

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+         KF+P  + V G DI+ F    + +       ++P  K VF HG + 
Sbjct: 465 STQGWPKKTA-DIQKFFPTSVLVTGYDIIFFWVARMMFMTCEFMKDIPF-KHVFIHGLVR 522

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN IDP+ V EE G DALR+ LV     G D  +  + ++   N + AN
Sbjct: 523 DSLGRKMSKSLGNGIDPLGVCEEYGADALRFTLVTGNTPGNDMRFYMERVEA--NRNFAN 580

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N     +  + +  D  +P     T +D  IL++ +  +Q++  ++    +  A   
Sbjct: 581 KIWNASKFVIMNLTEYDDAFVPEAADLTLADRWILTMLNETVQKVTRDLDRFELGEAADT 640

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V + +     D Y +  K      T+     T  +V V V+ +   LL  F+P +   ++
Sbjct: 641 VYNFIWNLYCDWYIELTKKRLYTSTDERNRRTAQFVLVHVLTRTLELLHPFMPFVTEHLW 700

Query: 475 DILFVADENRCFQSLDQ 491
             L    E+       Q
Sbjct: 701 QHLPHTGESIMLAPWPQ 717



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E   I         Q H+GHA +  + D+L RF R+ G    +  GTD  G       
Sbjct: 37  EKEAFSIVMPPPNVTGQLHMGHALDNTLQDILIRFKRMQGYHTAWIPGTDHAGIATQVKV 96

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                          + + D+  +  R +    D     F  T ++  
Sbjct: 97  EQQLAKEGKTRYDIGREAFLERVWAWKQQYGDRIEQQIRRLGSSCDWRRKRF--TMDETC 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++  + +KG IY+G     +        +D EV    +  +      PV
Sbjct: 155 AAAVREVFVSLYEKGLIYQGERITNWCPHCHTALSDIEVDHEEENGHLWYIKYPV 209


>gi|293567619|ref|ZP_06678963.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291589720|gb|EFF21524.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 133/349 (38%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|322807474|emb|CBZ05048.1| valyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIDVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPKKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|315282473|ref|ZP_07870879.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613881|gb|EFR87619.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 883

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLAEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFK 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDXEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 594 GMKYSEIDLTNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
               
Sbjct: 712 EWPT 715



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   +         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSVVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKEANISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|254828213|ref|ZP_05232900.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600602|gb|EEW13927.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 883

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 133/364 (36%), Gaps = 35/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++  +      R  +        + D  +SR+   W
Sbjct: 358 VEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 477 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 537 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSYEKVESTWN--FINKIWN-ASRFVLMNLD 593

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                       TE SD+ IL+  +  +Q +    +          + S + +   D Y 
Sbjct: 594 GMKYNEIDLSNVTEVSDKWILTRLNETIQAVTSLGEKYEFGEVGRTLYSFIWDDFCDWYI 653

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V    +     LL  F+P +  +I+  L    E+    
Sbjct: 654 EIAKIP--LYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITIA 711

Query: 488 SLDQ 491
              +
Sbjct: 712 EWPK 715



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 39  TDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 98

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 99  VEAKLKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +KG IY+G Y   +    +   +D EV  
Sbjct: 159 DAVKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 198


>gi|69246247|ref|ZP_00603860.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879526|ref|ZP_05659179.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883460|ref|ZP_05663113.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890246|ref|ZP_05669899.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894823|ref|ZP_05674476.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258616812|ref|ZP_05714582.1| valyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559758|ref|ZP_05831938.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293559745|ref|ZP_06676266.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622457|ref|ZP_06701479.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938905|ref|ZP_07846172.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943091|ref|ZP_07849892.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948112|ref|ZP_07851513.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951622|ref|ZP_07854667.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993873|ref|ZP_07859207.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996714|ref|ZP_07861737.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195348|gb|EAN09797.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813754|gb|EEV42512.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819118|gb|EEV46446.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826606|gb|EEV53232.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257831202|gb|EEV57809.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074426|gb|EEW62748.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291598004|gb|EFF29114.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291606293|gb|EFF35706.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589152|gb|EFR67997.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591683|gb|EFR70528.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596218|gb|EFR75063.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598193|gb|EFR77038.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641779|gb|EFS06359.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645448|gb|EFS10028.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 133/349 (38%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|257885020|ref|ZP_05664673.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820872|gb|EEV48006.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 133/349 (38%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|261209049|ref|ZP_05923453.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566557|ref|ZP_06446979.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293557231|ref|ZP_06675779.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|294615719|ref|ZP_06695572.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617315|ref|ZP_06696955.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260076961|gb|EEW64684.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161656|gb|EFD09534.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591439|gb|EFF23095.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596424|gb|EFF27677.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291600595|gb|EFF30899.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 133/349 (38%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  ++ + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETIERVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|167745430|ref|ZP_02417557.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662]
 gi|167655151|gb|EDR99280.1| hypothetical protein ANACAC_00121 [Anaerostipes caccae DSM 14662]
          Length = 879

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 155/403 (38%), Gaps = 18/403 (4%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQ 158
             ++  + + K + ++G + K           +      E            +     ++
Sbjct: 315 ERYEARKAIVKDLEEQGYLVKIKEHEHNVGTHDRCKATIEPMVKPQWFVKMDELAKPAIE 374

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV----ISFVKSGLKDLSLSRKTF 214
            ++     F    Y    L + E+  ++ +  +             + G   ++  +   
Sbjct: 375 AVKNGDIKFVPERYTKTYLHWLENIRDWCISRQLWWGHRIPAYYCDECGETVVAKEKPEV 434

Query: 215 --DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G       +  +  W  +     +T G+ +  +     F+P ++ V G DI+ F  
Sbjct: 435 CPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEQTE-ELDYFYPTNVLVTGYDIIFFWV 493

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +  +  +   P    +        KG K+SKSLGN IDP+EVI + G DALR+ LV
Sbjct: 494 VRMVFSGYEHTGKAPFDTVLIHGLVRDDKGRKMSKSLGNGIDPLEVISQYGADALRFTLV 553

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G D  +  + ++   N   AN + N  SR + M  +  D         T +D  I
Sbjct: 554 TGNAPGNDMRFYMERVEASRN--FANKVWN-ASRFMMMNFEQADFSHVELSDLTSADRWI 610

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS  + + +++ +NM    +  A+ ++   + E   D Y +  KP  L     +  +  L
Sbjct: 611 LSKFNTLAKDVTDNMDKYELGIAVQKLNDFIWEEFCDWYIEMVKP-RLYNDEDNTKAAAL 669

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   +V+ +   LL  F+P +  +I+  L   +E+    S  +
Sbjct: 670 WTLKKVLSESLKLLHPFMPFITEEIYCNL-TGEESIMLASWPE 711



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA +  + D+L RF ++ G + L+  GTD          
Sbjct: 35  SKKPFTIVIPPPNITGKLHMGHALDETLQDILIRFKKMQGYNTLWQPGTDHASIATEVKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
             A                      + ++           L     +D    T ++    
Sbjct: 95  IEALKEEGIEKEDLGREKFLERAWEWKEEYGGTIVSQLKKLGSACDWDRERFTMDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ K+ +KG IYKG     +    +   +D EV       ++     PV
Sbjct: 155 AVEEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVDQAGHFWHIKYPV 207


>gi|170755423|ref|YP_001782798.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120635|gb|ACA44471.1| valyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIEVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPTKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|148381112|ref|YP_001255653.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153934142|ref|YP_001385486.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935830|ref|YP_001388892.1| valyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290596|emb|CAL84725.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152930186|gb|ABS35686.1| valyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931744|gb|ABS37243.1| valine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIDVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPKKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|312875830|ref|ZP_07735820.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797311|gb|EFR13650.1| valyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 882

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/386 (21%), Positives = 153/386 (39%), Gaps = 39/386 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++    +  +   +      +P  R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIRVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKVCSKCGSSNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + +         P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSGLEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R + M L       P    FT ++  ILS    +++E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFMLMNLDIDTSFKPDESKFTFTERWILSRLDTLIREVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-ILYNKEAENNKEVQYVLLTVLTNVLKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQR 492
           P +  +I+  L   +E+       + 
Sbjct: 684 PFVTEEIYLNLPHDEESLVISKWPEA 709



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCTLWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|153940722|ref|YP_001392440.1| valyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152936618|gb|ABS42116.1| valine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320426|gb|ADG00804.1| valine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/480 (19%), Positives = 176/480 (36%), Gaps = 63/480 (13%)

Query: 44  DVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
           D+ F TG       +     +     +V    N      M D   I+Y    R  E   +
Sbjct: 267 DMEFGTG------AVKITPAHDPNDYQVGKRHNLPEINVMFDDGRINY-KETRYHEMDRY 319

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + + + + ++G + K                        +   ++  +  ++ +  +
Sbjct: 320 EARKAIVEDLKNEGFLVKIK------------------EHNHNVSCHDRCNTVIEPIISK 361

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++       +   ++     +P  R ++        ++D  +SR+   WG  I + 
Sbjct: 362 QWFVKMEELAKPAIDVVKNKKVKFVPE-RFDKTYFNWMENIQDWCISRQ-LWWGHRIPVW 419

Query: 222 DDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                                          ++  W  +     +T G+ D     K  F
Sbjct: 420 YCKDCGEVIVVTEEPKKCPKCNSEKLQQDNDVLDTWFSSALWPFSTLGWPDKTPDLK-YF 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P +  V G DI+ F    + +       ++P    +        +G+K+SKSLGN +DP
Sbjct: 479 YPNNTLVTGYDIIFFWVARMVFSGLYCMDDIPFDTVLIHGIVRDSEGKKMSKSLGNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           IEVI+E G DALR+ LV   A G D  Y  + ++   N   AN I N     +  + KD 
Sbjct: 539 IEVIDEYGADALRFTLVTGNAPGNDIRYYPERVEAARN--FANKIWNASRFVLMNLDKDL 596

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                    +T +D+ ILS  + V++E+ EN++   +  A  ++   +     D Y +  
Sbjct: 597 MDKYKDNKNYTIADKWILSRLNTVVKEVTENIEKFELGIASQKIYDFIWGEFCDWYIELV 656

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           KP  L   +         V  +V+     LL   +P +  +I+  L+   E+       +
Sbjct: 657 KP-VLYGEDEQSKGIAFNVLHKVLETSLQLLHPIMPFITEEIYTHLYTEYESIVISKWPE 715



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTLQDILMRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +N                       + D+     R+    L  S D F R   T +++ 
Sbjct: 96  VENELLKEGIVKKEIGREAFLEKVWEWTDEYRNKIRNQIKKLGCSLD-FTRERFTMDEQL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 155 DKAVKHFFVKLYNEGLIYQGNRITNWCPKCKTALSDAEIEYSEHEGHFWHVKYPVVGSDE 214


>gi|297250681|ref|ZP_06934199.1| methionine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838302|gb|EFH22240.1| methionine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 462

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +             +++ A    
Sbjct: 13  LSDWDISRDAPYFGFEIPDSPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAGSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +        SD ++L+  +   + I E  +N+   +AL  +++L   V+ Y DA KPWE
Sbjct: 193 KLKDV-----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K     +R   V    +     L   L   +P+ A      L +          + R+
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTILTAYLAPVLPQTAANAARFLNLD----AITWANTRV 303

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 304 TLGEHTINKYEHLMQR 319


>gi|289434832|ref|YP_003464704.1| hypothetical protein lse_1467 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171076|emb|CBH27618.1| valS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 882

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 134/363 (36%), Gaps = 33/363 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L+  ++  +      R  +        + D  +SR+   W
Sbjct: 357 VEPYLSLQWFVKMEPLAAEALALQKTEDKVNFVPARFEKTYETWMDNIHDWCISRQ-LWW 415

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 416 GHRIPAWYHKETGEIYVGEKAPENISEWEQDEDVLDTWFSSALWPFSTMGWPDTESEDYK 475

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 476 HFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR V M L 
Sbjct: 536 DPIEVIDKYGADSLRYTLATGSSPGQDLKFSFEKVESTWN--FINKIWN-ASRFVLMNLN 592

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +           TE SD+ IL+  +  +Q +    +          + + + +   D Y 
Sbjct: 593 EMKYSEIDLSNVTEVSDKWILTRLNETIQSVTSLGEKYEFGEVGRTLYNFIWDDFCDWYI 652

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +     T   V    +     LL  F+P +  +I+  L    E+     
Sbjct: 653 EIAK-ISLYGEDEVAKQTTRSVLAYTLNATMRLLHPFMPFVTEEIWQNLPHEGESITISE 711

Query: 489 LDQ 491
             +
Sbjct: 712 WPK 714



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  TDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R+  + L +  D      T +    
Sbjct: 98  VEAKLKEENISRYDLGRENFIDKTWEWKEEYADFIREQWEKLGLGLDYSRERFTLDAGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++ K+ +KG IY+G Y   +    +   +D EV  
Sbjct: 158 DAVKKVFVKLYNKGLIYRGQYIINWDPEAKTALSDIEVIH 197


>gi|154484613|ref|ZP_02027061.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC
           27560]
 gi|149734461|gb|EDM50378.1| hypothetical protein EUBVEN_02329 [Eubacterium ventriosum ATCC
           27560]
          Length = 879

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 158/409 (38%), Gaps = 38/409 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L  E Y    E ++   G  Y   H  ++    + +F ++    
Sbjct: 310 YAGMDRYEARKAIVEDLDKEGYLVKIEDHEHNVGTCYR-CHTTIEPRVSKQWFVKMEEIA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   ++     +P     +        ++D  +SR+ +                   
Sbjct: 369 KPAIEAVKNGDTKFVPPHFD-KTYFHWLENIRDWCISRQLWWGHRIPAFYCDDCGEMVVT 427

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G ++  DP   +  W  +     +T G+ DN +     F+P ++ V G D
Sbjct: 428 KEDHAVCPKCGKEMRQDPD-TLDTWFSSALWPFSTLGWPDNTE-ELDYFYPTNVLVTGYD 485

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + +     +  +P    +        +G K+SKSLGN IDP+EVI++ G DA
Sbjct: 486 IIFFWVIRMMFSGLEHTGKVPFDTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADA 545

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L+   A G D  +  + ++   N   AN + N        + ++   +   P   T
Sbjct: 546 LRFTLITGNAPGNDMRFYWERVEASRN--FANKVWNASRFIQMNMPEEGIDVKNKPENLT 603

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
           ++D+ ILS  + + +++ EN+    +  A  ++   + E   D Y +  KP  L   + D
Sbjct: 604 DADKWILSKVNTLAKDVTENLDKFELGIAADKIYEFIWEEFCDWYIEMVKP-RLYNDDDD 662

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                L+   +V+     LL  ++P +  +IF  L   +E        +
Sbjct: 663 TKKAALWTLKKVLIDALKLLHPYMPFITEEIFCNLQDEEETIMLSKWPE 711



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 54/174 (31%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILTRFKRMQGYEALWLPGTDHASIATEAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     +  Q           +  S  +D    T ++   
Sbjct: 93  IVEKMREEGITKEDLGREKFLDRAWQWKAQYGGRIVSQLKKIGSSCDWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++  + +KG IY+G     +        +D EV        +     P+
Sbjct: 153 KAVKEVFVNLYNKGQIYRGERIINWCPHCLTSISDAEVEYEDQAGKFWHLRYPL 206


>gi|331082707|ref|ZP_08331830.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400326|gb|EGG79968.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 881

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 148/383 (38%), Gaps = 38/383 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M +  +F R+    +  +   ++     +P  R ++     
Sbjct: 338 VPHSHSVGTHDRCKTTVEPMIKPQWFVRMKEMGEAAIETLKNGELQFVPE-RFDKTYMHW 396

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
              ++D  +SR+ +                             G       +  +  W  
Sbjct: 397 LENIRDWCISRQLWWGHRIPAYYCDECGETVVAREMPEKCPKCGCTHLHQDEDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +     +   P    + 
Sbjct: 457 SALWPFSTLGWPEKTE-EMEYFYPTDVLVTGYDIIFFWVIRMVFSGLEQTGKTPFHHVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERIEASRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
              AN + N  SR + M L+  D          T +D+ ILS  + + +E  EN+    +
Sbjct: 576 --FANKVWN-ASRFIMMNLEKADIPKNIDLQTLTGADKWILSKVNTLAKEATENLDKYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A+ +V   + E   D Y +  KP      +  +A+ +      V+     LL  ++P 
Sbjct: 633 GIAVQKVYDFIWEEFCDWYIEMVKPRLYNDEDTTKAAALW-TLKTVLSNALKLLHPYMPF 691

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +  +I+  L   +E+    +  +
Sbjct: 692 ITEEIYCTLCPEEESIMISAWPE 714



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 34  RDKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTDHAAIATEVK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++      +    L  S  +D    T ++   
Sbjct: 94  VIEKLKEQGIDKNEIGREEFLKHAWEWKEEYGGKIINQLKKLGASADWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              + ++ K+ +KG IYKG     +    +   +D EV       ++   + PV   E
Sbjct: 154 KAVQEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPVAGEE 211


>gi|282911292|ref|ZP_06319094.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324987|gb|EFB55297.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312437877|gb|ADQ76948.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 876

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRTLYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    E     
Sbjct: 648 EMSKIP--MNGNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGETIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|299822786|ref|ZP_07054672.1| valine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816315|gb|EFI83553.1| valine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 884

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++     + L + ++  +      R  +        + D  +SR+   W
Sbjct: 359 VEPYLSKQWFVKMEPLAKQALDFQKTEEKINFVPPRFEKTYENWMDNIHDWCISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D  +    
Sbjct: 418 GHRIPAWYHKKTGELYVGTEAPADLENWEQDEDVLDTWFSSGLWPFSTMGWPDTENEDYK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P ++ V G DI+ F    + + +   + + P    +        +G K+SKSLGN +
Sbjct: 478 HFFPTNVLVTGYDIIFFWVSRMIFQSLEFTGHKPFNDTLLHGLVRDAEGRKMSKSLGNGV 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DPIEVI++ G D+LRY L    + G+D  +  + ++   N    N I N  SR   M + 
Sbjct: 538 DPIEVIDKYGADSLRYMLSTGTSPGQDLKFSFEKIEASWN--FINKIWN-ASRFALMNMD 594

Query: 372 DYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                        E SD+ IL+  +  ++ + +  +          + + + +   D Y 
Sbjct: 595 GMTFEEIDLSHVKEVSDKWILTRLNETIEAVTKLAERYEFGEVGRVLYNFIWDDLCDWYI 654

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +     T   V    + Q   LL  F+P +  +I+  L     +     
Sbjct: 655 EIAK-ISLYGEDEIAKKTTKSVLAYTLDQTMRLLHPFMPFVTEEIWQNLPHEGTSITVAE 713

Query: 489 L 489
            
Sbjct: 714 W 714



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   +         + HIGHA+++ + D++AR  R+ G D L+  G D  G      
Sbjct: 40  KDKQAFSVVIPPPNVTGKLHIGHAWDVTLQDIIARIKRMQGFDTLYLPGMDHAGIATQAK 99

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +S D      T ++   
Sbjct: 100 VEEKLREEGISRYDLGREKFIDQVWDWKEEYAGEIRKQWGKLGLSLDYSRERFTLDEGLS 159

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++  + +K  IY+G Y   +    +   +D EV  
Sbjct: 160 DAVKKVFVTLYEKELIYRGEYIINWDPVAKTALSDIEVIH 199


>gi|313888188|ref|ZP_07821862.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845878|gb|EFR33265.1| valine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 883

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 148/389 (38%), Gaps = 39/389 (10%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y   + +  A G      H  ++ +  + +F +++      L  Y      I+P  R  
Sbjct: 332 FYIGKKHHHNAVGH-CERCHTVIEPLISKQWFVKMAPLAKPALEEYRKGNLNIIPE-RFG 389

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKI----------------------------PDDPQY 226
           ++       ++D ++SR+   WG ++                                Q 
Sbjct: 390 KIYENWLENIRDWNISRQ-LWWGHRLPVWYSDSDDEIVISREDPSNTEGHEGKTYTQDQD 448

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
            +  W  +     +T G+ +        F+P ++ V G DI+ F    + + A   +  L
Sbjct: 449 TLDTWFSSALWPFSTLGWPEKTP-EYDYFYPTNVLVTGYDIIFFWVIRMVFSALEQTGKL 507

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      +      +G K+SKSLGN IDP+++I + G DALR+ LV     G D  +   
Sbjct: 508 PFKDVFLNGLVRDDQGRKMSKSLGNGIDPLDIIRDYGADALRFTLVTGNTPGNDMRFYIK 567

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++   N + AN + N     +  +  + +            D+ I+S   +V++ I E 
Sbjct: 568 RVEA--NRNFANKLWNATRFLMMNMSDEIEDSNFDVNKLHYQDKWIISKLQKVIKSITEK 625

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +    I  A   +   +     D Y +  KP  L   + +  +  + V + V+  +  LL
Sbjct: 626 IDKYDIGLAADDIYDFIWSDFCDWYIEIVKP-VLYSDDVEEKTNTVKVLLYVLENILKLL 684

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
             F+P +  +I+  L    E     +  +
Sbjct: 685 HPFMPYITEEIWQALPNRKEALIVAAWPE 713



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 50/173 (28%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I           H+GHA    I DVL R  R+ G   L+  GTD         
Sbjct: 33  ENKKPYSIVMPPPNVTGNLHMGHALNNTIQDVLIRTKRMQGYSALWLPGTDHASISTEAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     +  +   N  +    L IS D      T +    
Sbjct: 93  VVEKLRNEGFNKEDIGREKFLEHAWEWTHEYGGNIVNQLKKLGISCDWSRQSFTLDDNLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                ++ ++ +KG IY+G     +    E   +D EV              P
Sbjct: 153 HAVEEVFIELYEKGLIYRGNRIINWCPSCETSISDAEVEHEESDGNIWYFKYP 205


>gi|229825433|ref|ZP_04451502.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC
           49176]
 gi|229789996|gb|EEP26110.1| hypothetical protein GCWU000182_00792 [Abiotrophia defectiva ATCC
           49176]
          Length = 897

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/389 (20%), Positives = 152/389 (39%), Gaps = 15/389 (3%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            +     + G  Y+        ++++ +   DE+ K A       +   +     +  +F
Sbjct: 340 KIEDHSHNVGTCYRCHSVVEPLIKEQWFVKMDEMIKPASEAVKKGELKLI-PERMDKIYF 398

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
             +          +      +P     +    + +        +     G       +  
Sbjct: 399 NWTDNIRDWCISRQLWWGHRIPAWYCGDCGEVIVAK----EEPKVCPKCGKAHLRQDEDT 454

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +        F+P D+ V G DI+ F    + + AF  +   P
Sbjct: 455 LDTWFSSALWPFSTLGWPNETP-EYKYFYPTDVLVTGYDIIFFWVIRMVFSAFEHTGKAP 513

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +F        G K+SKSLGN IDP+E+I++ G DALR+ L+   A G D  +  + 
Sbjct: 514 FNTVMFHGLVRDSLGRKMSKSLGNGIDPLEIIDKYGADALRFTLITGNAPGNDMRFYNER 573

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIREN 404
           ++   N   AN + N  SR + M L   +          T +D+ ILS  +++  E+ EN
Sbjct: 574 VEASRN--FANKVWN-ASRFIMMNLDAAEVPANIELSDLTPADKWILSRANKLSAEMTEN 630

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M    +  A+ +V   + E   D Y +  KP     T+  +A+ +      V+  +  LL
Sbjct: 631 MDAFELGIAVQKVYDFIWEEFCDWYIEMVKPRLYSDTDKTKAAALF-TLKTVLINMLKLL 689

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
             F+P +  +I+  L   + N   ++  +
Sbjct: 690 HPFMPFVTEEIYQALRENEPNEAVKAAME 718



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD          
Sbjct: 35  NKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRFKRMQGFEALWQAGTDHASIATEAKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                                    + ++           L  S D      T ++   +
Sbjct: 95  VEKLKEEGTSKEELGREGFLKRAWEWKEEYGGRIISQLKKLGSSCDWERERFTMDEGCSE 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ K+ DK  IYKG     +        +D EV       ++     PV
Sbjct: 155 AVKEVFVKLYDKKLIYKGSRLVNWCPVCNTSISDAEVEHEEKAGHFWHIKYPV 207


>gi|257888392|ref|ZP_05668045.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293570381|ref|ZP_06681438.1| valyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257824446|gb|EEV51378.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|291609559|gb|EFF38824.1| valyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 881

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 132/349 (37%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  +  + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|227550359|ref|ZP_03980408.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897234|ref|ZP_05676887.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378006|ref|ZP_06624184.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227180498|gb|EEI61470.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833799|gb|EEV60220.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643371|gb|EFF61503.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 881

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 132/349 (37%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  +  + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|319400980|gb|EFV89199.1| valyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 876

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 138/369 (37%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L    +         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRALDNQNTKDRIDFFPGRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKDTGEVFVGEEAPEDIENWIQDEDVLDTWFSSALWPFSTLGWPDTNADDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + E             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADQWILTRLNETISTVTELSDKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   +  +  T   V   V+ ++  +L  F+P +   I+  L    E     
Sbjct: 648 EMSKIP--MNDEDESQKQTTRSVLSYVLDKIMKMLHPFMPFVTETIWQSLPHHGETIVKA 705

Query: 485 CFQSLDQRL 493
            + ++DQ L
Sbjct: 706 NWPTVDQAL 714



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  Q A    + +     + +  +   LD S + F  T +  
Sbjct: 92  VEVKLNEQGISRHDLGREKFLQQAWDWKEEYATFIRQQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVRKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|317055676|ref|YP_004104143.1| valyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447945|gb|ADU21509.1| valyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 897

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 141/380 (37%), Gaps = 42/380 (11%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            D       H+ ++ M  + +F ++    +  +   E      +P  R  +      +  
Sbjct: 364 HDVGTCYRCHSTIEPMISKQWFVKMKPLAEPAIKAVEDGKIKFVPE-RFTKTYLNWMNNT 422

Query: 205 KDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALT 236
           +D  +SR+   WG +IP                               +  +  W  +  
Sbjct: 423 RDWCISRQ-LWWGHRIPAWYCADCGEINVAKEAPCKCKKCGSTNLTQDEDSLDTWFSSAL 481

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +  G+ D        F+P    V G DI+ F    + +     +   P    +    
Sbjct: 482 WPFSILGWPDKQSDDFNYFYPTSTLVTGYDIIGFWVSRMIFSGLAYTGKAPFDTVLIHGI 541

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               +G K+SKSLGN IDP+EVI++ G DALR+ LV+  + G D  Y ++ +    N   
Sbjct: 542 VRDSQGRKMSKSLGNGIDPLEVIDQYGADALRFMLVQGSSPGNDMRYSEEKIVAMRN--- 598

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                N +  +   +L +        P   T  D+ ILS  ++V++E+  N+++  +  A
Sbjct: 599 ---FTNKIWNASRFLLMNMTIDKIELPKELTLEDKWILSSLNKVIKEVTYNLEHFEMGVA 655

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             +V   +     D Y +  K       +      V  V   V+  +  +L  F+P +  
Sbjct: 656 AQKVYDFIWNSFCDWYIELAK-NRFNGEDAQAKKNVENVLAYVLTDILKMLHPFMPFITE 714

Query: 472 KIFDILFVADENRCFQSLDQ 491
           +I+  L   +     QS  +
Sbjct: 715 EIYQALPHDEGYLMMQSWPE 734



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 19/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I+        Q H+GHA +  + D+L RF R+ G   L+  GTD          
Sbjct: 34  KKKPYSIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALWIPGTDHAAIATEAKI 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      + ++      +    L  S D      T + +   
Sbjct: 94  VEAMRQEGITKADLGRDKFMERAWAWKEKFGGRIVEQLRTLGTSCDWEREHFTMDDQCSK 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQWME 161
               ++ K+ ++G IY+G     +  + +   +D EV     DG +++  +   +  E
Sbjct: 154 AVLEVFVKLYEEGLIYRGNRMVNWCPKCQTSISDAEVEYDNKDGNFWHILYKVKETGE 211


>gi|322383210|ref|ZP_08057021.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152479|gb|EFX45265.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 906

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 144/375 (38%), Gaps = 42/375 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   +S        +R  ++       ++D  +SR+   W
Sbjct: 378 VEPYLSTQWFVKMKPLAEKAIEVQKSDKGVHFVPDRFEKIYLHWIENIRDWCISRQ-LWW 436

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +     +T G+ +  
Sbjct: 437 GHRIPAWYCNSCGEVTVSGEDVTCCQHCQSNDIRQDEDVLDTWFSSALWPFSTLGWPEQT 496

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D  K +++P ++ V G DI+ F    + + +   +  +P    +        +G K+SKS
Sbjct: 497 DDLK-RYFPTNVLVTGYDIIYFWVARMIFSSLEFTGQIPFKDVLVHGLVRDAEGRKMSKS 555

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+EVI++ G DA+RY L      G+D  +  + +++  N   AN I N  SR  
Sbjct: 556 LGNGIDPLEVIKQYGADAMRYMLSTSSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 612

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+ ++       G    SD  IL   +   +++   +           + + + +  
Sbjct: 613 LMNLEGFNMEDLDFGGELGTSDRWILHRFNETARDVTRLLDQYEFGETGRLLYNFIWDDL 672

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   +         V V V+     L+  F+P ++ +I+  L    E 
Sbjct: 673 CDWYIEFSK-LSLYGDDEQAKKKTQSVLVYVLDHTMRLIHPFMPFISEEIWQHLPHEGET 731

Query: 484 RC---FQSLDQRLKP 495
                +   D R + 
Sbjct: 732 ITRTAWPHPDDRFEA 746



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           HIGHA +  + D++ R  R+ G D L+  G+D  G       
Sbjct: 60  EREPYMIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGSDHAGIATQTKV 119

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
           +                        + +  +   R+    + +S D F R   T ++   
Sbjct: 120 EQKLREEGVSRYDLGREAFLEKVWDWKELYAGTIREQWGKMGLSLD-FSRERFTLDEGLS 178

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ K+ DKG IY+G Y   +        +D EV  
Sbjct: 179 KAVRKVFVKLYDKGLIYRGKYIINWDPAARTALSDIEVEY 218


>gi|257899235|ref|ZP_05678888.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837147|gb|EEV62221.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 881

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 132/349 (37%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    K +   E+         R N+        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKKAIDNQETDQAVEFFPPRFNQTFLRWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDPD-VLDTWFSSALWPFSTMGWPDTESEDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  I 
Sbjct: 533 IDPMEVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNIE 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                 I   G  + +D  IL+  +  +  + E         A  Q+ + + +   D Y 
Sbjct: 591 GMTVEEIDLSGEKSVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYI 650

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   L   +     T   + V  + Q+  LL   +P +  +I++ +
Sbjct: 651 EMSK-EVLYGDDAVSKQTTRSILVHTLDQILRLLHPIMPFVTEEIWEHI 698



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ + + R+    + +S D      T +    
Sbjct: 96  VEAKLREQGISRYDLGREKFIDQVWEWKEEYANHIREQWAKMGLSLDYSRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++  + +KG IY+G Y   +  +     +D EV  
Sbjct: 156 EAVRKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVIH 195


>gi|168208620|ref|ZP_02634245.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170713145|gb|EDT25327.1| valyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 880

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCQDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   +E
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSDE 213


>gi|169343619|ref|ZP_02864618.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298179|gb|EDS80269.1| valyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 880

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCQDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   EE
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSEE 213


>gi|329724727|gb|EGG61233.1| valine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 876

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 138/369 (37%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L    +         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRALDNQNTKDRIDFFPGRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKDTGEVFVGEEAPEDIENWIQDEDVLDTWFSSALWPFSTLGWPDTNADDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + E             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADQWILTRLNETISTVTELSDKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   +  +  T   V   V+ ++  +L  F+P +   I+  L    E     
Sbjct: 648 EMSKIP--MNGEDESQKQTTRSVLSYVLDKIMKMLHPFMPFVTETIWQSLPHHGETIVKA 705

Query: 485 CFQSLDQRL 493
            + ++DQ L
Sbjct: 706 NWPTVDQAL 714



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  Q A    + +     + +  +   LD S + F  T +  
Sbjct: 92  VEAKLNEQGISRHDLGREKFLQQAWDWKEEYATFIRQQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVRKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|110801210|ref|YP_696599.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675857|gb|ABG84844.1| valyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 880

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCKDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +      V   EE
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYQVVGSEE 213


>gi|27468257|ref|NP_764894.1| valyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867133|ref|YP_188802.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875919|ref|ZP_06284786.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366387|ref|ZP_06613066.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81819377|sp|Q5HNN9|SYV_STAEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81843675|sp|Q8CS83|SYV_STAES RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27315803|gb|AAO04938.1|AE016748_172 valine-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637791|gb|AAW54579.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294944|gb|EFA87471.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319512|gb|EFE59879.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733785|gb|EGG70111.1| valine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737114|gb|EGG73368.1| valine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 876

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/369 (19%), Positives = 138/369 (37%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L    +         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRALDNQNTKDRIDFFPGRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKDTGEVFVGEEAPEDIENWIQDEDVLDTWFSSALWPFSTLGWPDTNADDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + E             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADQWILTRLNETISTVTELSDKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   +  +  T   V   V+ ++  +L  F+P +   I+  L    E     
Sbjct: 648 EMSKIP--MNGEDESQKQTTRSVLSYVLDKIMKMLHPFMPFVTETIWQSLPHHGETIVKA 705

Query: 485 CFQSLDQRL 493
            + ++DQ L
Sbjct: 706 NWPTVDQAL 714



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  Q A    + +     + +  +   LD S + F  T +  
Sbjct: 92  VEAKLNEQGISRHDLGREKFLQQAWDWKEEYATFIRQQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVRKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|168215545|ref|ZP_02641170.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182624398|ref|ZP_02952182.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910401|gb|EDT72778.1| valyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182382320|gb|EDT79799.1| valyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 880

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCKDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   EE
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSEE 213


>gi|269215053|ref|ZP_06159011.1| methionine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208418|gb|EEZ74873.1| methionine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 462

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +             +++ A    
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCGRIGIDFDEYFKAGSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRSPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +        SD ++L+  +   + I E  +N+   +AL  +++L   V+ Y DA KPWE
Sbjct: 193 KLKDV-----SDSALLAKLTAQSEAIAECYENREYAKALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K     +R   V    +     L   L   +P+ A      L +          + R+
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTILTAYLAPVLPQTAANAARFLNLD----AITWANTRV 303

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 304 TLGEHTINKYEHLMQR 319


>gi|110802251|ref|YP_699196.1| valyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110682752|gb|ABG86122.1| valine--tRNA ligase [Clostridium perfringens SM101]
          Length = 880

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCKDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADKWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   +E
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSDE 213


>gi|225076782|ref|ZP_03719981.1| hypothetical protein NEIFLAOT_01833 [Neisseria flavescens
           NRL30031/H210]
 gi|224951880|gb|EEG33089.1| hypothetical protein NEIFLAOT_01833 [Neisseria flavescens
           NRL30031/H210]
          Length = 463

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ A    
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKAGSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +         D  +L+  +   + I E  +N+   RAL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKDVT-----DSELLAKLAAESETIAEQYENREYARALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K     +R   V    +     L   L   +P+ A      L +          + R+
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD----AITWANTRV 303

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 304 TLGEHAINKYEHLMQR 319


>gi|312898925|ref|ZP_07758313.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620087|gb|EFQ03659.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 887

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 44/382 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+ +  + +F ++    ++ L+  +      +P  R  ++       ++D  
Sbjct: 349 HCSRCKTTVEPLSTKQWFVKMKPLAEEALAAVDRGDTKFIP-GRFTKIYDHWLENIQDWC 407

Query: 209 LSRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYL 239
           +SR+   WG +I                               DP  ++  W  +     
Sbjct: 408 ISRQ-LWWGHQIPVWYCDDCGEVSASRTDLTECPHCHSKHIHQDPD-VLDTWFSSALWPF 465

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ D        F+P  + V G DI+ F    + +        +P            
Sbjct: 466 STMGWPDKTP-DLQHFFPTSVLVTGYDIIFFWVARMMFATCEFMKEVPFKDVFIHGLVRD 524

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN IDP+EV +  G DALR+ LV     G D  +  + ++   N + AN 
Sbjct: 525 SQGRKMSKSLGNGIDPLEVSDMYGADALRFTLVTGNTPGNDMRFYMERVEA--NRNFANK 582

Query: 358 IGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           I N  S+ V M L+DYD    PT   FT +D  IL+  ++V++++ + + +  +  A A 
Sbjct: 583 IWN-ASKFVIMNLEDYDPEFVPTTDDFTLADRWILTSFNQVVRQVTKGLDSYELGDAAAT 641

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V         D Y +  K    K  +     T  YV V V+     LL  F+P +   ++
Sbjct: 642 VYDFTWNSFCDWYIELAKQRLYKSDDKRSRQTAQYVLVRVLTGALALLHPFMPFVTEHLW 701

Query: 475 DILFVADENRC---FQSLDQRL 493
             L    E+     + ++D+ L
Sbjct: 702 QHLPHEGESLIVAPWPTVDEAL 723



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I         Q H+GHA +  + D+L RF R+ G +V++  GTD  G      
Sbjct: 36  SSREPYSIVMPPPNVTGQLHMGHALDNTLQDILIRFKRMSGYNVVWIPGTDHAGIATQVK 95

Query: 62  AQN--------------------AGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                          K  + ++  +  R +    D S   F  T + 
Sbjct: 96  VEEQLAKEEGKTRYDIGREEFLKRVWAWKEKYGNRIEQQVRRLGSSCDWSRKRF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 R ++  + +KG IY+G     +        +D EV    +  +      PV
Sbjct: 154 ICARAVREVFVALYEKGLIYQGHRITNWCPHCHTALSDIEVDHKDEAGHLWYVKYPV 210


>gi|329727331|gb|EGG63787.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 876

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNSNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|167759909|ref|ZP_02432036.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
 gi|167662528|gb|EDS06658.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
          Length = 883

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/392 (20%), Positives = 161/392 (41%), Gaps = 37/392 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           +E  Y    V    +   ++  H  V+ M ++ +F R+       +   ++     +P  
Sbjct: 328 EEQGYLVKVVPHSHNVGTHDRCHTTVEPMVKQQWFVRMEELAKPAIEAVKNGDLKFVPE- 386

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
           R +++       ++D  +SR+ +                             G       
Sbjct: 387 RFDKIYLHWLENIRDWCISRQIWWGHRIPAYYCDECGDIVVSCDVPEKCPKCGCTHFTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+ +  +     F+P D+ V G DI+ F    + +  +  + 
Sbjct: 447 EDTLDTWFSSALWPFSTLGWPEKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYAHTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P             +G K+SKSLGN IDP+E+IE+ G DALR  L+   A G D  + 
Sbjct: 506 KTPFHTVFIHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRMTLITGNAPGNDMRFY 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + ++   N   AN + N  SR + M ++D +   P       +D  I+S C+ +++++ 
Sbjct: 566 NERVEASRN--FANKVWN-ASRFIMMNIEDKEITEPADFKLRPADRWIMSKCNNLVKDVT 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLA 459
           ENM    +  AL+++   + +   D Y +  K      + +   A+  ++   EV+++  
Sbjct: 623 ENMDKYELGIALSKIYDFMWDEFCDWYIEIAKYRIYHVEEDQKSANDAMWTLREVLKKSL 682

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            LL  ++P ++ +I+  L   +E+       +
Sbjct: 683 KLLHPYMPFVSEEIYGKLVPEEESLMMSEWPK 714



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R +   +T +  PN   + H+GHA +  + D+L R+ R+ G + L+  GTD        
Sbjct: 33  DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMQGYNALWVPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +    D    L +S  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKELGREKFLERTWQWKEEYAGTIEDQLKKLGVSCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ K+ ++G IY+G     +    +   +D EV        +     P+
Sbjct: 153 SKAVEEVFIKLYEEGYIYRGSRIINWCPVCKTSLSDAEVEHEEQDGDFWHIKYPI 207


>gi|168214160|ref|ZP_02639785.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714391|gb|EDT26573.1| valyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 880

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCKDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADQWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   +E
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSDE 213


>gi|168204897|ref|ZP_02630902.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170663625|gb|EDT16308.1| valyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 880

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCKDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCKEYSLADQWILSRMNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   EE
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSEE 213


>gi|329733231|gb|EGG69568.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 876

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNSNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|15927242|ref|NP_374775.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283336|ref|NP_646424.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486490|ref|YP_043711.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57650536|ref|YP_186549.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160762|ref|YP_494306.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195468|ref|YP_500272.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268144|ref|YP_001247087.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394211|ref|YP_001316886.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221770|ref|YP_001332592.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509882|ref|YP_001575541.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142585|ref|ZP_03567078.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317192|ref|ZP_04840405.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732314|ref|ZP_04866479.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257794050|ref|ZP_05643029.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415754|ref|ZP_05682025.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258422009|ref|ZP_05684929.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438233|ref|ZP_05689517.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443691|ref|ZP_05692030.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258444929|ref|ZP_05693249.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258447983|ref|ZP_05696115.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451821|ref|ZP_05699843.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454309|ref|ZP_05702278.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262052238|ref|ZP_06024443.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203281|ref|YP_003282550.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893160|ref|ZP_06301394.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920205|ref|ZP_06327930.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929338|ref|ZP_06336905.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024713|ref|ZP_06379111.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848686|ref|ZP_06789432.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405975|ref|ZP_06815783.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274908|ref|ZP_06857415.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207622|ref|ZP_06924057.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245099|ref|ZP_06928976.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911704|ref|ZP_07129148.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380744|ref|ZP_07363413.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649185|sp|Q6G8R2|SYV_STAAS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81704362|sp|Q7A0P4|SYV_STAAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81781461|sp|Q99TJ8|SYV_STAAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81859571|sp|Q5HFA8|SYV_STAAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|122539344|sp|Q2FXR8|SYV_STAA8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|123485492|sp|Q2FG72|SYV_STAA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|172048932|sp|A6QHJ8|SYV_STAAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083635|sp|A6U2D1|SYV_STAA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083636|sp|A5ITI8|SYV_STAA9 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083637|sp|A8Z2I4|SYV_STAAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13701460|dbj|BAB42754.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|21204776|dbj|BAB95472.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244933|emb|CAG43394.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57284722|gb|AAW36816.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126736|gb|ABD21250.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203026|gb|ABD30836.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741213|gb|ABQ49511.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946663|gb|ABR52599.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374570|dbj|BAF67830.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368691|gb|ABX29662.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723952|gb|EES92681.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788022|gb|EEV26362.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839347|gb|EEV63820.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842053|gb|EEV66482.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848277|gb|EEV72268.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851097|gb|EEV75040.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257856137|gb|EEV79052.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858744|gb|EEV81615.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860533|gb|EEV83359.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863539|gb|EEV86298.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259159839|gb|EEW44878.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|262075571|gb|ACY11544.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941145|emb|CBI49532.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282589070|gb|EFB94171.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594553|gb|EFB99538.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764478|gb|EFC04604.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817346|gb|ADC37833.1| Valyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824712|gb|EFG41135.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968972|gb|EFG44993.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887639|gb|EFH26537.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178179|gb|EFH37427.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300887125|gb|EFK82326.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302751490|gb|ADL65667.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340743|gb|EFM06674.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830042|emb|CBX34884.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130705|gb|EFT86691.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315198642|gb|EFU28970.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140457|gb|EFW32311.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143996|gb|EFW35765.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329314337|gb|AEB88750.1| Valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728349|gb|EGG64786.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 876

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNSNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|329573413|gb|EGG55023.1| valine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 829

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 129/354 (36%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K +   E+         R N+        + D  +SR+   W
Sbjct: 304 VEPRLSTQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQ-LWW 362

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +                              ++  W  +     +T G+ D       
Sbjct: 363 GHQTPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 422

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 423 RYFPTSTLVTGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGI 482

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL    A G+D  +  + +    N    N I N     +  +  
Sbjct: 483 DPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWNASRFVIMNVEG 540

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                I   G  T +D  IL+  +  +  + E         A  Q+ + + +   D Y +
Sbjct: 541 MTAADIDFSGEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIE 600

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K   L   N     T   + V  + Q+  LL   +P +  +I+  +    E+
Sbjct: 601 MSK-EILYGDNEAAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWGKIPHQGES 653



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 18/144 (12%)

Query: 18  AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------------ 65
            + H+GHA++  + D++ R  R+ G D L+  G D  G       +              
Sbjct: 1   GKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLAQQGISRYDLG 60

Query: 66  ----GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
                     + ++ + + R+    + +S D      T ++   +  R ++  + +K  I
Sbjct: 61  REKFVDQVWEWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLSEAVRKVFVSLYEKDLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYK 143
           Y+G Y   +  + +   +D EV  
Sbjct: 121 YRGEYIINWDPKAKTALSDIEVIH 144


>gi|18310901|ref|NP_562835.1| valyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|81766834|sp|Q8XJ42|SYV_CLOPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18145583|dbj|BAB81625.1| valine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 880

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++     V+ +  + ++ ++ +  D  +    +     +P  R  +      
Sbjct: 339 PHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPE-RFEKTYFNWM 397

Query: 202 SGLKDLSLSRKTFDWGIKIP--------------DDPQY--------------IMYVWID 233
             ++D  +SR+   WG +IP              +DP                ++  W  
Sbjct: 398 ENIQDWCISRQ-LWWGHRIPVFYCKDCGEIMVELEDPTKCCKCGSENIEQDKDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  D     F+P    V G DI+ F    + +         P    + 
Sbjct: 457 SALWPFSTLGWPDRTD-DLEFFYPTSTLVTGYDIIFFWVARMIFSGIHNMGETPFDTVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN +DP+EVI+E G DALR+ LV   A G D  Y  + ++   N
Sbjct: 516 HGIIRDAQGRKMSKSLGNGVDPLEVIDEYGADALRFMLVTGNAPGNDIRYIPERVEAARN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  + ++          ++ +D+ ILS  + +++E+ ENM+   + 
Sbjct: 576 --FANKIWNASRFVMMNLDRELMDKYKDCQEYSLADQWILSRTNSLIKEVTENMEKYELG 633

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL +V   +     D Y +  KP  L   +      V  V   V+     LL   +P +
Sbjct: 634 IALQKVHDFLWTEFCDYYIELVKP-VLYGDDEKAKGVVFNVLYTVLNTGLKLLHPVMPFI 692

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    E+    +   
Sbjct: 693 TEEIYTHLSTETESITIATWPT 714



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D+L RF R+ G   L+  G D         
Sbjct: 35  KSKKPYTIIMPPPNITGKLHLGHALDNTLQDMLIRFKRMQGYCTLWLPGQDHASIATEVK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N                       + D+     R+    +  S  +     T ++   
Sbjct: 95  VENELLKEGLYKKEMGREAFLEKVWEWTDEYRERIREQLKKMGCSADFTREAFTMDENLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+  +G IY+G     +  + +   +D E+        +     PV   EE
Sbjct: 155 KAVRHVFVKLYKEGLIYQGNRITNWCPKCQTALSDAEIEYEEKEGNFWHIKYPVVGSEE 213


>gi|15615600|ref|NP_243904.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|12585349|sp|Q9K8G8|SYV_BACHD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10175660|dbj|BAB06757.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 880

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 133/362 (36%), Gaps = 35/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ +    +  +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMKPLAEQAIELQTTENKVNFVPDRFEKTYLRWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGEVYVGHEAPQDIDNWKQDEDVLDTWFSSALWPFSTMGWPDEEAPDYK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++  D  V G DI+ F    + +     +   P    +        +G+K+SKSLGN +
Sbjct: 475 RYYSTDALVTGYDIIFFWVSRMIFQGLEFTGQPPFKDVLIHGLVRDAEGQKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVI++ G DALR+FL    + G D  +  + ++   N    N I N  SR   M + 
Sbjct: 535 DPMEVIDKYGADALRFFLATGSSPGNDLRFYWEKVESTWN--FGNKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+     ++ +   +           + + + +   D Y 
Sbjct: 592 GMSYDEIDLTGEKSIADQWILTRLQETIETVTRLIDAYEFGEVGRHLYNFIWDDLCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   +     T   V   V+ Q   LL   +P +  +I+  L    E+    
Sbjct: 652 EMAKLP--LYGEDEVAKKTTRSVLAYVLDQTMRLLHPLMPFITEEIWQHLPHEGESITVA 709

Query: 488 SL 489
           S 
Sbjct: 710 SW 711



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA++  + D+L+R  R+ G D L+  G D  G      
Sbjct: 37  ETKKPYTIVIPPPNVTGKLHLGHAWDTALQDILSRLKRMQGYDTLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +S D      T ++   
Sbjct: 97  VEAKLREEGKSRYDLGREAFVEKTWEWKEEYADFIRQQWAKLGLSLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ +KG IY+G Y   +    +   +D EV       Y+     P+
Sbjct: 157 KAVREVFVKLYEKGLIYRGEYIINWDPVTKTALSDIEVIYKDVQGYFYHMKYPL 210


>gi|197303308|ref|ZP_03168348.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
 gi|197297592|gb|EDY32152.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
          Length = 882

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/391 (21%), Positives = 158/391 (40%), Gaps = 39/391 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE  Y    V        ++     V+ + ++ +F ++       ++  ++     +P  
Sbjct: 328 DEQGYLVKVVPHMHAVGTHDRCGTTVEPLIKQQWFVKMDELAKPAINALKTGELRFVPE- 386

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
           R +++       +KD  +SR+ +                             G       
Sbjct: 387 RFDKIYLHWLENIKDWCISRQIWWGHRIPAYYCDECGEFVVAREMPEKCPHCGCTHFTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+ D  +     F+P D+ V G DI+ F    + +  +  + 
Sbjct: 447 EDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYAHTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +        +G K+SKSLGN IDP+E+I++ G DALR  L+   A G D  + 
Sbjct: 506 KAPFNTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQYGADALRLTLITGNAPGNDMRFY 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + ++   N   AN + N  SR + M +K+     P     T +D  ILS  + + +++ 
Sbjct: 566 NERVEASRN--FANKVWN-ASRFILMNMKENVVEKPEDALLTPADRWILSAVNTLAKDVT 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQL 458
           ENM    +  A+ +V   + +   D Y +  K   W   + +   A+ VL+V   V+ Q 
Sbjct: 623 ENMDKFELGIAVQKVYDFIWDEFCDWYVELAKYRIWH-AEEDQAAANCVLWVLKTVLGQA 681

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LL  F+P +  +I+  L   +E+    S 
Sbjct: 682 LKLLHPFMPFITEEIYLALVPEEESLMMSSW 712



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 67/175 (38%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD        
Sbjct: 33  DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +    +    L IS  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKELGREGFLERTWQWKEEYAGTIENQLKKLGISCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++  + +KG IYKG     +  + +   +D EV       ++     P+
Sbjct: 153 SKAVEEVFISLYEKGYIYKGSRIINWCPKCKTSLSDAEVEHEDQDGHFWHIKYPI 207


>gi|325263634|ref|ZP_08130368.1| valine--tRNA ligase [Clostridium sp. D5]
 gi|324031343|gb|EGB92624.1| valine--tRNA ligase [Clostridium sp. D5]
          Length = 882

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/391 (21%), Positives = 159/391 (40%), Gaps = 38/391 (9%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            ++ +    E +    G  ++     V+ + ++ +F ++       ++  ++     +P 
Sbjct: 328 EEQGFLVKIEPHSHNVGT-HDRCGTTVEPLIKQQWFVKMEELAKPAINALKTGELKFVPE 386

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDD 223
            R +++       +KD  +SR+ +                             G      
Sbjct: 387 -RFDKIYLHWLENIKDWCISRQIWWGHRIPAYYCDKCGEFVVAKEMPETCPHCGGTHFTQ 445

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            +  +  W  +     +T G+ D  +     F+P D+ V G DI+ F    + +  F  +
Sbjct: 446 DEDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGFEHT 504

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P    +        +G K+SKSLGN IDP+E+I++ G DALR  LV   A G D  +
Sbjct: 505 GKSPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQYGADALRLTLVTGNAPGNDMRF 564

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             + ++   N   AN + N  SR + M +++     P      E+D+ ILS  + + +++
Sbjct: 565 YNERVESSRN--FANKVWN-ASRFILMNIENETLTQPETTELAEADKWILSKVNTLAKDV 621

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQL 458
            ENM    +  A+ +V   V +   D Y +  K     K  NP  A+  L+    V+ Q 
Sbjct: 622 TENMDKFELGIAVQKVYDFVWDEFCDWYIEMAKYRIYHKEENPQAANCALWTLKTVLGQA 681

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +L  F+P +  +I+  L   +E+    + 
Sbjct: 682 LKMLHPFMPFVTEEIYKALVPEEESLMMSNW 712



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD        
Sbjct: 33  DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +    +    L IS  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKTLGREGFLERTWQWKEEYAGTIENQLKKLGISCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ K+ +KG IYKG     +    +   +D EV       ++     P+
Sbjct: 153 SKAVEEVFIKLYEKGYIYKGSRIINWCPVCKTSLSDAEVEHEEQDGFFWHIKYPI 207


>gi|302333330|gb|ADL23523.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 876

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNDEEQKQITRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|295102463|emb|CBL00008.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 901

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/393 (21%), Positives = 155/393 (39%), Gaps = 38/393 (9%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +  + E  K   G  Y   H+ ++ M  + +F ++       +   E      +P 
Sbjct: 351 KEGGFLKEIEPLKHEVGTCYR-CHSTIEPMVSKQWFVKMEPLAKPAIESVEKGDIKFVPE 409

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFD------W----------------------GIKIPD 222
            R  +         +D  +SR+ +       W                      G ++  
Sbjct: 410 -RFTKNYMNWMKNTRDWCISRQLWWGHQIPAWYCDDCGETVVAKSAPCTCPKCGGTRLTQ 468

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           DP   +  W  +     +T G+ +        F+P +  V G DI+ F    + +     
Sbjct: 469 DPD-TLDTWFSSALWPFSTLGWPNEESEDLKYFYPTNTLVTGYDIIGFWVSRMIFSGLAY 527

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P             +G K+SKSLGN IDP+EVI + G DALR+ LV     G D  
Sbjct: 528 TGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDGSTPGNDMR 587

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           Y +  ++   N   AN + N     +  + +D+   +P       SD+ +L+  ++V   
Sbjct: 588 YSEKKVEAARN--FANKLWNATRFVLMNLPEDFQPGLPGEEKLDMSDKWVLTKLNQVAGA 645

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + +N+ +  +  A A++ S + +   D + +  KP  L   + ++A T   V V V+ + 
Sbjct: 646 MSDNLDHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTARRVLVYVLDKA 704

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             LL  F+P +  +++  L  + E    QS   
Sbjct: 705 LKLLHPFMPFITEELYQALPGSAETIMTQSWPT 737



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R  R+ G   L+  GTD          
Sbjct: 34  DKKPYTIVMPPPNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKV 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      +  +           L  S D      T ++   +
Sbjct: 94  VEAMRAEGLTKEMVGRDGFLERAWAWKTKYGNRIVSQLKKLGSSCDWERERFTMDEGCSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ DKG IY+G     +        +D EV        +     PV
Sbjct: 154 AVKEVFVRLYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLYPV 206


>gi|323440792|gb|EGA98501.1| valyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442947|gb|EGB00570.1| valyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 876

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMDDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNDEEQKQITRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|15924653|ref|NP_372187.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156979981|ref|YP_001442240.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006449|ref|ZP_05145050.2| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|81774901|sp|Q931Q1|SYV_STAAM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|166225533|sp|A7X383|SYV_STAA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14247435|dbj|BAB57825.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722116|dbj|BAF78533.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 876

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNSNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|222056164|ref|YP_002538526.1| valyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565453|gb|ACM21425.1| valyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 886

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 80/362 (22%), Positives = 138/362 (38%), Gaps = 41/362 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ ++    ++ L+  +     I+P +  N    +++  ++D  +
Sbjct: 347 CYRCKTVVEPYMSLQWYVKVGPLAERALAAVKEGKTRIVPQQWENTYYEWME-NIRDWCI 405

Query: 210 SRKTFDWGIKIP--------------DDPQY--------------IMYVWIDALTNYLTT 241
           SR+   WG +IP               DP                ++  W  +     +T
Sbjct: 406 SRQ-IWWGHRIPAWYCDHCGEITVAKVDPVKCSKCGSDEIRQETDVLDTWFSSALWPFST 464

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D      A F+P    + G DIL F    +          +P             +
Sbjct: 465 MGWPDRTP-ELATFYPTSCLITGFDILFFWVARMMMMGLHFMEEVPFVDVYIHALVRDAQ 523

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNVIDP+ VI+  G DA R+ L    A G+D    ++ +      + AN I 
Sbjct: 524 GQKMSKSKGNVIDPLTVIDSYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFANKIW 581

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  SR   M L+ +D             +D  IL   +    E+ E++     + A A +
Sbjct: 582 N-ASRFAMMNLEGFDPDAVKADELELSNADRWILYRLNETAGEVEESLNAYRFNDAAAAL 640

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +  K  +L K +  R +T  Y+   V+  L  LL  F+P +  +I+ 
Sbjct: 641 YRFTWSEFCDWYIELVKD-DLYKGDSTRQTTARYILWMVLEHLLRLLHPFMPFITEEIWQ 699

Query: 476 IL 477
            L
Sbjct: 700 AL 701



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 35  SAKPAYSIVIPPPNITGVLHMGHALNNTLQDILCRWKRMQGFNVLWMPGTDHAGIATQNV 94

Query: 62  AQ--------------NAGVTTKVFVD------QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                  T +V+        Q     + +    D   + F  T ++ 
Sbjct: 95  VERQLAAEGKDRHELGREAFTERVWQWKSESGGQIIGQLKRLGASCDWGRERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++ ++ ++G IY+      +  R     +D EV       +      PV
Sbjct: 153 LSKAVREVFVRLYEEGLIYRDNRLINWCPRCHTALSDIEVEHEEKEGHLWHLRYPV 208


>gi|82751253|ref|YP_416994.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123547885|sp|Q2YTA0|SYV_STAAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|82656784|emb|CAI81213.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 876

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNDEEQKQITRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEKGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|323704372|ref|ZP_08115951.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536438|gb|EGB26210.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 878

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/374 (20%), Positives = 144/374 (38%), Gaps = 38/374 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H  V+    + +F ++       L    +     +P  R  ++       +KD  
Sbjct: 344 HCYRCHTTVEPFLSKQWFVKMEPLAKPALEAVRTGKIEFIPE-RFEKIYFNWLENIKDWC 402

Query: 209 LSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           +SR+ +                             G K     + ++  W  +     +T
Sbjct: 403 ISRQLWWGHRIPAWYCDDCGHVNVSKNDPVCCEKCGSKNIHQDEDVLDTWFSSALWPFST 462

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +  +  K  F+P D+ V G DI+ F    + + +      +P  + +        +
Sbjct: 463 MGWPEETEDLK-YFFPTDVLVTGYDIIFFWVARMIFMSLEFMKEVPFRRVLIHGLVRDSQ 521

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+E+IE+ G D LR+ L+   A G D  +  D ++   N   AN + 
Sbjct: 522 GRKMSKSLGNGIDPLEIIEKYGADTLRFTLITGNAPGNDMRFSDDKVEASRN--FANKLW 579

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V + L   D           +D+ IL+  + V++E+ EN++   +  A  ++  
Sbjct: 580 N-ASRYVMLNLTS-DDTTLYLENLNIADKWILTRLNDVVKEVTENLEKYELGIAAGKLYD 637

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     D Y +  KP  L   + +       V   V+     LL  F+P +  +IF  +
Sbjct: 638 FLWSEFCDWYIELSKP-VLYGDDFEAKKITKSVLRYVLDNTLRLLHPFMPFITEEIFKNI 696

Query: 478 FVADENRCFQSLDQ 491
               +        +
Sbjct: 697 PHEGDTIMLSKWPE 710



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 23/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA +  + D++ R+ R+ G   L+  G+D          
Sbjct: 33  NKKPFTIVIPPPNITGQLHMGHALDNTMQDIIIRWKRMQGFVTLWIPGSDHASIATEVKV 92

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        + ++      D    L  S D     F  T ++ 
Sbjct: 93  LDQIREETGLTKRDIGREKFLERAWQWKEKYENRILDQLKKLGSSCDWTRKRF--TMDEA 150

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R ++  + +KG IY+G     +    +   +D EV    +  +      PV+  E
Sbjct: 151 LSKAVREVFVSLYEKGLIYRGDRIINWCPSCKTALSDAEVEHEDESGHLWYIKYPVKGEE 210


>gi|258424081|ref|ZP_05686963.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845702|gb|EEV69734.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 876

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 134/362 (37%), Gaps = 34/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SL 489
           S 
Sbjct: 706 SW 707



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|298694934|gb|ADI98156.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 876

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNDEEQKQITRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|253734551|ref|ZP_04868716.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253727492|gb|EES96221.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
          Length = 876

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   + ++      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNSNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKG 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|153814976|ref|ZP_01967644.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|317501588|ref|ZP_07959782.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088546|ref|ZP_08337459.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847544|gb|EDK24462.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|316897005|gb|EFV19082.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407808|gb|EGG87302.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 881

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 84/392 (21%), Positives = 157/392 (40%), Gaps = 37/392 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           +E  Y    V        ++     V+ + ++ +F ++       +   +S     +P  
Sbjct: 328 EEQGYLVKVVPHTHAVGTHDRCGTTVEPLIKQQWFVKMEELAKPAIEALKSGELKFVPE- 386

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
           R +++       +KD  +SR+ +                             G       
Sbjct: 387 RFDKIYLHWLENIKDWCISRQIWWGHRIPAYYCDECGEFVVDRHAPEKCPHCGCTHFTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+ D  +     F+P D+ V G DI+ F    + +  +  + 
Sbjct: 447 EDTLDTWFSSALWPFSTLGWPDKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYEHTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +        +G K+SKSLGN IDP+E+I++ G DALR  LV   A G D  + 
Sbjct: 506 KSPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDKYGADALRLTLVTGNAPGNDMRFY 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + ++   N   AN + N  SR + M + +     P+   FT +D  ILS  + + +++ 
Sbjct: 566 NERVEASRN--FANKVWN-ASRFIMMNMDENIIDEPSHDLFTPADRWILSAANTLAKDVT 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLA 459
           +NM    +  A+ +V   + +   D Y +  K     K   P+ A+  L+V   V+ Q  
Sbjct: 623 DNMDKFELGIAVQKVYDFIWDEFCDWYVEMAKFRIYHKEEAPEAANCALWVLKTVLAQGL 682

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            LL  F+P +  +I+  L   +E+       +
Sbjct: 683 KLLHPFMPFITEEIYGALVPEEESLMMSEWPK 714



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R +   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD        
Sbjct: 33  DRSRKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +    +    L IS  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKELGREGFLERTWQWKEEYAGTIENQLKKLGISCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ K+ +KG IYKG     +  + +   +D EV       ++     P+
Sbjct: 153 SKAVEEVFIKLYEKGYIYKGSRIINWCPKCKTSLSDAEVEHEEQEGHFWHIKYPI 207


>gi|312793668|ref|YP_004026591.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180808|gb|ADQ40978.1| valyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 874

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 153/385 (39%), Gaps = 39/385 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++    +  +   +      +P  R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIRVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKVCSKCGSSNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + +         P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSGLEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    +++E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLIREVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L          V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L   +E+    +  +
Sbjct: 684 PFVTEEIYLNLPHVEESLVIATWPK 708



 Score = 77.1 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCTLWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|228968149|ref|ZP_04129152.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791541|gb|EEM39140.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 425

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 172/419 (41%), Gaps = 25/419 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +  TC         +G I   C+      + +A     +     +         P    E
Sbjct: 5   YCKTCTQFLPDRYVEG-ICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTP-SVEE 62

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTF-DWGIK 219
            E ++F L  +Q ++    E   E              +VK GL+D ++SR       I 
Sbjct: 63  TEHFYFALHTFQQQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRAVSRDLPIGVPIP 122

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPD-GSKAKFWPAD---LHVIGKDILRFHAIYW 275
           +       +YVWI+A+  Y + + Y          +FW +D    +V GKD + FH+I W
Sbjct: 123 VKGYEDKKIYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIW 182

Query: 276 PAFLL-SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           PA LL      +P+ + S+ ++  +  K+S S    +   +++E    D++RYFL     
Sbjct: 183 PAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAP 242

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +         N++L    GN V+R++  I K YDG++P      E    +    
Sbjct: 243 ENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVE----LKDKV 298

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + + + E ++      AL  +   V   ++YFD ++PW+ ++ NP      +Y  + +
Sbjct: 299 EGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIYNCIYL 358

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
           I   A LL+ F+P  + ++   L +   NR ++       P   L    D   P+F R 
Sbjct: 359 IANFANLLEPFLPFSSERVRSTLSIV--NRNWE-------PQNTLPNRIDSVQPLFERI 408


>gi|325478556|gb|EGC81668.1| valine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 879

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 158/369 (42%), Gaps = 38/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++  +    +  Y++    ++P    ++      + ++D ++SR+   W
Sbjct: 349 IEPLISKQWFVKMDEFAQMCIDAYDNGEVTLIPDS-LSKTYMNWLNNIRDWTISRQ-LWW 406

Query: 217 GIKIP---------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           G ++P                              +  +  W  +      T G+ D  +
Sbjct: 407 GHRLPVFYTDDGEIIVSEDEPDENGMLNGVHVTQEEDTLDTWFSSALWPFATLGWPDENE 466

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                F+P D+ V G DI+ F    + + +   ++ +P    +F+      +G K+SKSL
Sbjct: 467 -EFDYFFPTDILVTGYDIIFFWVIRMIFSSMYNTSKVPFHHVLFTGLIRDPQGRKMSKSL 525

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DPI+V+ E G DALR+ L+   + G D  YD+  +    N   AN + N  SR V 
Sbjct: 526 GNGVDPIDVVNEYGADALRFTLITGNSPGNDMRYDEKRILASRN--FANKLWN-ASRFVL 582

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           M +++ D +  +       D+ IL   + V+ ++ +N+    I  A  ++   +     D
Sbjct: 583 MNIEEGDDLNFSGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRIEDFIWNEYCD 642

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   + D  + V  V + V+R++  LL  F+P +  +IF  L    +   
Sbjct: 643 WYIEFAK-IRLYGEDEDAKANVKKVLLYVLRKMLALLHPFMPFITEEIFAALPDTKDLLI 701

Query: 486 FQSLDQRLK 494
            +   + ++
Sbjct: 702 VEEWPEFVE 710



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 18/168 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I           H+GHA    I D++ R  R+ G + L+  GTD          
Sbjct: 31  DKKPFTIVMPPPNVTGYLHLGHALNNTIQDIIIRHKRMAGYEALWIPGTDHASISTESKV 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            +                       +  +     +     + +S  +D    T +     
Sbjct: 91  VDKISKEGKTKADLGRDGFLEEAWDWTHKYGGTIKQQLRTIGVSCDWDHDSFTMDDNLTK 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++KK+ D G IY+G     +  + E   +D EVY      +   
Sbjct: 151 AVKRVFKKMYDDGLIYRGNRIVNWDPKAETAISDAEVYHEDQTGHLWY 198


>gi|169829404|ref|YP_001699562.1| valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168993892|gb|ACA41432.1| Valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 881

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 136/365 (37%), Gaps = 36/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    D  L   +    +      R     S     ++D  +SR+   
Sbjct: 355 VEPYLSAQWFVKMQPLADSSLELQKDQEGKVNFVPARFENTYSRWMENIRDWCISRQ-LW 413

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D  +   
Sbjct: 414 WGHQIPAWYHNETGEIYVGKEAPVDAENWTQDEDVLDTWFSSALWPFSTMGWPDEANEEY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTNTLVTGYDIIFFWVSRMIFQGLEFTEQRPFKDVLIHGLVRDGEGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VIE+ G D+LRYFL    + G+D  Y  + ++   N   +N I N  SR   M +
Sbjct: 534 VDPMDVIEQYGADSLRYFLATGSSPGQDLRYTTEKVEAVWN--FSNKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  + +D+ IL+  +  ++ +    +         ++ + + +     Y
Sbjct: 591 DGMTYDEIDLTGEKSVADKWILTRLNETIERVTSLAERYEFGEVGRELYNFIWDDFCSWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   +   V+ Q   LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFITEEIWQHLPHDGESITV 708

Query: 487 QSLDQ 491
            +   
Sbjct: 709 AAWPT 713



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  SGKKPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAGIATQAK 95

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            +                     T  + ++ + + RD      L + Y     T +K   
Sbjct: 96  VEAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGLDYTRERFTLDKGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ +KG IY+G     +    +   +D EV  
Sbjct: 156 EAVNTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIY 195


>gi|116491375|ref|YP_810919.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116092100|gb|ABJ57254.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 902

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/361 (21%), Positives = 137/361 (37%), Gaps = 36/361 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    ++ L    + + +      R  +      + + D  +SR+   
Sbjct: 370 VEARLSTQWFVKMKPLAEQALKMQKQQNDKVDFWPVRFEDTYQTWMNNIHDWVISRQ-LW 428

Query: 216 WGIKIP--------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           WG +IP                           DP  ++  W  +     +T G+ D  +
Sbjct: 429 WGHRIPAWYRDTKEGEKETYVGLTAPKGDGWTQDPD-VLDTWFSSALWPFSTLGWPDTNN 487

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               +F+P    V G DI+ F    + + A   +   P    +        KG K+SKSL
Sbjct: 488 SDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEFTGTRPFKNVLIHGLIRDSKGRKMSKSL 547

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP++VI + G DALR+FL      G+D  +  D +    N    N I N+    + 
Sbjct: 548 GNGIDPMDVINKYGTDALRWFLSTGSTPGQDLNFSNDKMDSAWN--FINKIWNVSRYVLM 605

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            +  D    +P     T +D+ ILS  +  ++ + +N        A  Q+ + + +   D
Sbjct: 606 NLETDTKIELPDRNLLTLADKWILSRLNSTIENVTKNFDKFEFGEAGRQLYNFIWDDFAD 665

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   +      V  V   V+ Q   LL   +P +   I+  L    +N+ 
Sbjct: 666 WYIEMTK-ETLNDDSALNKRPVQQVLAYVLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQS 724

Query: 486 F 486
            
Sbjct: 725 L 725



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G       + 
Sbjct: 48  EAYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEA 107

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + D+ +   ++    + +S D      T +K  ++  
Sbjct: 108 RLREDGISRYDLGREKFVDKVWQWKDEYASIIKEQWAKMGLSLDFSRERFTLDKGLNEAV 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 168 RKVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDD 207


>gi|312127460|ref|YP_003992334.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777479|gb|ADQ06965.1| valyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 874

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/385 (22%), Positives = 154/385 (40%), Gaps = 39/385 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            EV    +  +       ++ +  + +F ++    +  +   +      +P  R  ++  
Sbjct: 331 KEVDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIRVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKVCSKCGSSNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + +         P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSGLEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    +++E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVLMNLDIDTSFKPDASKFTFTERWILSRLDTLVREVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L          V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDVLKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L   +E+    +  +
Sbjct: 684 PFVTEEIYLNLPHVEESLVIATWPK 708



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCTLWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|70726264|ref|YP_253178.1| valyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|90108438|sp|Q4L703|SYV_STAHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68446988|dbj|BAE04572.1| valine-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 876

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 134/364 (36%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRSLDNQKTDDRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPKDIDNWVQDEDVLDTWFSSALWPFSTLGWPNIDADDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIEE G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I  
Sbjct: 530 DPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGD 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           ++        G  + +D+ IL+  +  ++ +    +          + + + +   D Y 
Sbjct: 588 EFKFEDIDLTGNLSLADKWILTRLNETIETVTNLSEKYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   +  +  T   V    + Q+  +L  F+P +  KI+  L    E     
Sbjct: 648 EMSKIP--MNGEDEAQKQTTRSVLSYTLDQIMRMLHPFMPFVTEKIWQSLPHEGETIVKA 705

Query: 488 SLDQ 491
           S   
Sbjct: 706 SWPT 709



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 60  -----------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +       + K  +     + +  +   LD S + F  T +  
Sbjct: 92  VDAKLKEQGISRHDIGREKFLEHAWSWKEEYASFIRQQWAKLGLGLDYSRERF--TLDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
                R ++  + +KG IY+G     +        +D EV      G +Y+ ++
Sbjct: 150 LSKAVRKVFVDLYNKGIIYRGERIINWDPEARTALSDIEVIHEDVQGHFYHFKY 203


>gi|225562391|gb|EEH10670.1| methionine-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 355

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 119/302 (39%), Positives = 161/302 (53%), Gaps = 37/302 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGL-DVLFTTGTDEHGQKIAKA 61
           +++  Y++T I Y NA PH+GH Y MI+ADVL R+  L G  D    TGTDEHG KI +A
Sbjct: 56  DKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTDAKLLTGTDEHGLKIQQA 115

Query: 62  AQNAGVTTKVFVDQNSRNF--------------------------RDMADVLDISYDDFI 95
           A   GVT +   DQN + F                          +++A   ++ YD FI
Sbjct: 116 AAALGVTPQALCDQNCKTFQVCVIRRSGDGLLWQLGRADAQDLDLKNLARKGNVGYDHFI 175

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK------GADGQY 149
           RTT+  H +  R  W  ++ +G IY   + GWYS+ DEA+Y    V        G     
Sbjct: 176 RTTDAEHKEAVRYFWDMLNHRGYIYTSKHEGWYSVSDEAFYPPSAVQPTLDPSTGRKIIT 235

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  VQW  EE Y FRLSA+Q+ LL ++  +P+FI P    + ++S V SGL+DLS+
Sbjct: 236 SIETGKEVQWASEENYHFRLSAFQEPLLEHFRKNPDFITPRNYMDGIVSAVTSGLQDLSI 295

Query: 210 SRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           SR      WGI +P D   ++YVW+DAL NY+T  GY   P       WPAD+ V+GKDI
Sbjct: 296 SRPASRLKWGIPVPYDESQVIYVWLDALVNYITYAGYPFPPGA--QSIWPADVQVVGKDI 353

Query: 268 LR 269
           LR
Sbjct: 354 LR 355


>gi|146297043|ref|YP_001180814.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410619|gb|ABP67623.1| valyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 874

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 39/385 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++    +  +   +      +   R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIRVVKEGKIKFILE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKI----PDDPQYIM------------------------YV 230
                +KD  +SR+   WG +I      D   +M                          
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCKDCDNMMVSRQEVKVCSKCGSTNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + + A       P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSAVEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+E+IE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEIIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    +++E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVIMNLDIDTNYKPDESKFTFTERWILSRLDTLIKEVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-ILYNKEAENNKEVQYVLLTVLTNILKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L  ++E+       +
Sbjct: 684 PFVTEEIYLNLPHSEESLVIAKWPE 708



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 52/172 (30%), Gaps = 18/172 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWVPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
             + ++ ++ +KG IYKG     +    +   +D EV              P
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCKTTISDAEVEYEEKKGKLWYIKYP 202


>gi|242242928|ref|ZP_04797373.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233643|gb|EES35955.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 886

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 137/369 (37%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L    +         R     +     ++D ++SR+   W
Sbjct: 361 VEPYLSTQWFVKMKPLAQRALDNQNTKDRIDFFPGRFENTFNRWMEEIRDWTISRQ-LWW 419

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 420 GHQIPAWYHKDTGEVFVGEEAPEDIENWIQDEDVLDTWFSSALWPFSTLGWPDTNADDFK 479

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 480 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 539

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 540 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGE 597

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            +        G  + +D+ IL+  +  +  + E             + + + +   D Y 
Sbjct: 598 GFKVEDIDLSGNLSLADQWILTRLNETISTVTELSDKYEFGEVGRALYNFIWDEFCDWYI 657

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   +  +  T   V   V+ ++  +L  F+P +   I+  L    E     
Sbjct: 658 EMSKIP--MNGEDESQKQTTRSVLSYVLDKIMKMLHPFMPFVTETIWQSLPHHGETIVKA 715

Query: 485 CFQSLDQRL 493
            + ++DQ L
Sbjct: 716 NWPTVDQAL 724



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 42  KSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 101

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  Q A    + +     + +  +   LD S + F  T +  
Sbjct: 102 VEAKLNEQGISRHDLGREKFLQQAWDWKEEYATFIRQQWAKLGLGLDYSRERF--TLDDG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + +KG IY+G     +  +     +D EV  
Sbjct: 160 LSKAVRKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 201


>gi|284799512|ref|ZP_06390190.1| methionine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284798091|gb|EFC53438.1| methionine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 463

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ AD   
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +        +D ++L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKDV-----ADSALLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K      R   V    +     L   L   +PK+A      L +  E   + +  + L
Sbjct: 248 LAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL 305

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 306 --GEHAINKYEHLMQR 319


>gi|260584693|ref|ZP_05852439.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157716|gb|EEW92786.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 881

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 130/349 (37%), Gaps = 35/349 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           V+    + +F ++    ++ +                R N+        + D  +SR+  
Sbjct: 353 VEPRLSKQWFVKMGPLAEQAIQAQRAEEDNTVNFYPPRFNDAYLRWMENIHDWVISRQ-L 411

Query: 215 DWGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
            WG +I                             ++  W  +     +T G+ D     
Sbjct: 412 WWGHQIPAWYHNETGEVYVGMEAPADAENWTQDVDVLDTWFSSALWPFSTMGWPDVEASD 471

Query: 252 KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
             +++P    V G DIL F    + +     +   P    +        +G K+SKSLGN
Sbjct: 472 YKRYYPTSTLVTGYDILTFWVSRMMFQGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGN 531

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            +DP+EVIE+ G DALR+FL    A G+D  Y  D +    N    N I N  SR   M 
Sbjct: 532 GVDPMEVIEQYGADALRWFLANGSAPGQDVRYSTDKMDAAWN--FINKIWN-ASRYALMN 588

Query: 370 LKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
           + D         G  T +D+ IL+  ++V+ ++ E  +      A   +   + +   D 
Sbjct: 589 IGDLTVDQLDITGEKTLADKWILTRLNQVIAKVTELFEKFEFGEAGRLLYRFIWDDFCDW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K   L   +     T   + V V+ Q   LL   +P +  +I+ 
Sbjct: 649 YIEMSK-ETLAGNDEAAKLTTRSILVYVLDQTLRLLHPIMPFVTEEIWQ 696



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + H+GHA+++ + D++ R  R+ G D L+  G D  G       + 
Sbjct: 37  EPYSIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGYDTLWLPGMDHAGIATQAKVEE 96

Query: 65  AGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                               T  + ++ + + R+    + IS D      T ++   D  
Sbjct: 97  KLRGEGLSRYDLGREKFLEQTWEWKEEYASHIREQWAKMGISVDYRRERFTLDQGLSDAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + ++  + +KG IY+G Y   +  + +   +D EV  
Sbjct: 157 KKVFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIH 193


>gi|239618105|ref|YP_002941427.1| valyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506936|gb|ACR80423.1| valyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 867

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 152/414 (36%), Gaps = 42/414 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L ++ Y    E    A G+ Y   H  V+    + ++ ++    
Sbjct: 308 YAGMDRYEARKAIVKDLEEQGYLEKIESMTHAVGKCYR-CHTVVEPSLSDQWYVKIGPLA 366

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
           ++     E       P  R  +V     + ++D  +SR+ +                   
Sbjct: 367 ERAKKAVEDGEVVFFPE-RWKKVYLNWMNEIRDWCISRQLWWGHRIPVWYCNDCGEIIVE 425

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G K     + ++  W  +     TT G+    +  K  F+P  + V G D
Sbjct: 426 EDDPTSCPKCGSKSLRQDEDVLDTWFSSQLWPFTTLGWPGETEDLKT-FYPTSVLVTGFD 484

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    +    +  +   P              G K+SKSLGN IDP++VIEE G D 
Sbjct: 485 IIFFWVARMIMAGYHFTGEKPFSDVYIHQLVRDKHGRKMSKSLGNGIDPLDVIEEYGADP 544

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +R+ L    A G+D   D            AN I N  SR   M L +Y  +  T     
Sbjct: 545 MRFTLSMLAAQGRDIKLDPRFFD--TYKRFANKIWN-ASRFAIMNLDNYVPIELTEETLE 601

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPD 442
             D  ILS   R ++++ + M+N   + A   + S       D Y +  KP    + N  
Sbjct: 602 LEDRWILSRLQRTIEQVTDAMENYDFNIAAKAIYSFFWNEFCDWYIETVKPRL--RENGM 659

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRL 493
                  V V+V+ Q   LL  F+P +  +++  L V  E      + ++D  L
Sbjct: 660 TKHVAQNVLVKVLDQSLRLLHPFMPFITEELWQKLPVGGEAIIISDWPAVDDSL 713



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 22/176 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA  + + D+L R+ R+ G + L+  G D  G     A + + 
Sbjct: 36  FTIVIPPPNITGSIHMGHALNLTLQDILIRYKRMRGFNTLWVPGEDHAGIATQNAVERSL 95

Query: 67  VT----------------TKVFVDQNSR----NFRDMADVLDISYDDFIRTTEKRHHDTC 106
            +                   +V+   +      + +    D S + F  T ++      
Sbjct: 96  ASKGINREELGREKFLEEVWDWVNTYRKRIVTQIKAIGASCDWSRERF--TLDEGLSKAV 153

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           R  +  +  +G IY+G Y   +  R +   +D+EV    +   +     P++  E 
Sbjct: 154 RKAFVTLYKEGLIYRGKYIVNWCPRCKTVLSDEEVEHEDEKGAFYYIRYPLKDEES 209


>gi|300769703|ref|ZP_07079586.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181105|ref|YP_003925233.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300492746|gb|EFK27931.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046596|gb|ADN99139.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 889

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 76/346 (21%), Positives = 137/346 (39%), Gaps = 33/346 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L   ++  +     +R  +  +     + D  +SR+   W
Sbjct: 363 VEARLSTQWFVKMKPLAEQALKNQKTDNKVEFVPDRFEDTFNQWMENVHDWVISRQ-LWW 421

Query: 217 GIKIP-----------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +IP                  DP+       ++  W  +     +T G+ +       
Sbjct: 422 GHRIPAWYNKTTGETYVGVDGPKDPENWEQDPDVLDTWFSSALWPFSTMGWPNTDAEDFK 481

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 482 RYFPTDTLVTGYDIIFFWVSRMMFQSLEFTGKRPFKHVLLHGLIRDEQGRKMSKSLGNGI 541

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL      G+D  +    +    N    N I N  SR V M L 
Sbjct: 542 DPMDVIEKYGADALRWFLSNGSTAGQDVRFSYTKMDAAWN--FINKIWN-ASRYVIMNLG 598

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
             D   +P    +T +D+ ILS  +  ++++           A   + + +     D Y 
Sbjct: 599 TMDKPELPAASDWTLADKWILSRLNATVKQVTTTFDKFDFGEAGRALYNFIWNDFCDWYI 658

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  K   L   +    +    V   V+ Q+  LL   +P +  KI+
Sbjct: 659 EMSK-EVLTGDDAQAKANTQNVLAYVLDQILRLLHPIMPFVTEKIW 703



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 98  VEAKLREQGISRYDLGREKFVQQVWDWKDEYASIIKQQWAKMGLSLDYSRERFTMDDGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           D  + ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 158 DAVKKVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDD 200


>gi|73662410|ref|YP_301191.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|90108439|sp|Q49Y96|SYV_STAS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72494925|dbj|BAE18246.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 876

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 140/369 (37%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L+  ++         R  +  +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAEQALNNQKTDDRIDFVPARFEKTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIFVGEHEPEDIENWVQDEDVLDTWFSSALWPFSTLGWPDVEADDFQ 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYFPTNALVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESIWN--FINKIWNAARFSIMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  ++ + E             + + + +   D Y 
Sbjct: 588 DFTVEQVDLSGDLSLADKWILTRLNETIENVTELSDKYEFGEVGRTLYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NR 484
           +  K P  +   +  +      V   V+     +L  F+P +  +I+  L    E     
Sbjct: 648 EMSKIP--MNGEDEAQKQITRSVLTYVLDNTMRMLHPFMPFVTEQIWQNLPHEGETIVKA 705

Query: 485 CFQSLDQRL 493
            +  +++ L
Sbjct: 706 AWPKVNEAL 714



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 32  QSKETYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  + +   + +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGLSRHDLGREKFLEQAWDWKEEYANFIRQQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G Y   +        +D EV  
Sbjct: 150 LSKAVKKVFVDMYNKGLIYRGEYIINWDPIARTALSDIEVIH 191


>gi|257066730|ref|YP_003152986.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798610|gb|ACV29265.1| valyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 879

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/369 (20%), Positives = 153/369 (41%), Gaps = 38/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++  +    +  Y+     ++P    ++      + ++D ++SR+ +  
Sbjct: 349 IEPLISKQWFVKMDEFAKMCIDAYDKGEVKLIPDS-LSKTYMNWLNNIRDWTISRQLWWG 407

Query: 217 ---------------------------GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
                                      G+ +  D    +  W  +      T G+ D  +
Sbjct: 408 HRLPVFYTDDGEIIVSEDEPDENGMLNGVHVTQDED-TLDTWFSSALWPFATLGWPDENE 466

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                F+P D+ V G DI+ F    + + +   +  +P    +F+      +G K+SKSL
Sbjct: 467 -ELDYFFPTDILVTGYDIIFFWVIRMIFSSIYNTGKVPFHHVLFTGLIRDPQGRKMSKSL 525

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DPI+V+ E G DALR+ L+   + G D  YD+  +    N   AN + N  SR V 
Sbjct: 526 GNGVDPIDVVNEYGADALRFTLITGNSPGNDMRYDEKRILASRN--FANKLWN-ASRFVL 582

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           M +++ D +          D+ IL   + V+ ++ +N+    I  A  ++   +     D
Sbjct: 583 MNIEEGDDLDFKGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRIEDFIWNEYCD 642

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   + +  + V  V + V++ + +LL  F+P +  +I+  L    +   
Sbjct: 643 WYIEFAK-IRLYGDDKEAKANVKKVLLYVLKNMLVLLHPFMPFITEEIYSSLPNKKDLLI 701

Query: 486 FQSLDQRLK 494
            +   +  K
Sbjct: 702 VEDWPEFNK 710



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 18/168 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I           H+GHA    I D++ R+ R+ G + L+  GTD          
Sbjct: 31  DKKPYTIVMPPPNVTGYLHLGHALNNTIQDIIIRYKRMAGFEALWIPGTDHASISTESKV 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            +   +                   + ++     ++    + +S  +D    T ++    
Sbjct: 91  VDKIYSEGKTKADLGREGFLEEAWDWTNKYGGRIKEQLRTIGVSCDWDHDSFTMDENLTK 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++KK+ D G IY+G     +  + E   +D EVY      +   
Sbjct: 151 AVKRVFKKMYDDGLIYRGNRIVNWDPKAETAISDAEVYHEDQVGHLWY 198


>gi|312622286|ref|YP_004023899.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202753|gb|ADQ46080.1| valyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 874

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 153/385 (39%), Gaps = 39/385 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++    +  +   +      +P  R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIKVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKVCSKCGSTNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + +         P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSGLEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVIMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-ILYNKEAENNKEVQYVLLTVLTNVLKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L   +E+    +  +
Sbjct: 684 PFVTEEIYLNLPHVEESLVIATWPK 708



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VENMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|222529480|ref|YP_002573362.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456327|gb|ACM60589.1| valyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 874

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 153/385 (39%), Gaps = 39/385 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++    +  +   +      +P  R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIKVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKVCSKCGSTNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + +         P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSGLEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVIMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L     +    V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-ILYNKEAENNKEVQYVLLTVLTNVLKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L   +E+    +  +
Sbjct: 684 PFVTEEIYLNLPHVEESLVIATWPK 708



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|288553603|ref|YP_003425538.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544763|gb|ADC48646.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 880

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 134/365 (36%), Gaps = 35/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D  +   +S  +     +R  +        ++D  +SR+   W
Sbjct: 356 VEPYLSTQWFVKMQPLADAAIELQKSEDKVNFVPDRFEKTYLRWMENIRDWCISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYHKETGEVYVGHEAPKDPENWKQDEDVLDTWFSSALWPFSTMGWPDTNAADYE 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +F+  ++ V G DI+ F    + +     +   P    +        +G K+SKSLGN +
Sbjct: 475 RFYTTNVLVTGYDIIFFWVSRMIFQGLEFTGKRPFNDVLIHGLVRDSEGRKMSKSLGNGV 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL    + G D  +  + ++   N    N I N  SR   M + 
Sbjct: 535 DPMDVIDKYGADALRFFLSTGSSPGNDLRFYWEKVESTWN--FGNKIWN-ASRFALMNMD 591

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
                     G  + +D+ IL+      +++   +           + + + +   D Y 
Sbjct: 592 GLTYDEIDLSGEKSIADKWILTRLQETTEDVTRLIDAYEFGEVGRLLYNFIWDDFCDWYI 651

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  L   N +   T   V   V+ Q   LL   +P +  +I+  L    ++    
Sbjct: 652 EMAKLP--LNSDNEEAKRTTRSVLAYVLDQTMRLLHPIMPFITEEIWQHLPHQGDSITVA 709

Query: 488 SLDQR 492
               R
Sbjct: 710 EWPVR 714



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA++  + D+L+R  R+ G D L+  G D  G      
Sbjct: 37  SKKQPYSIVIPPPNVTGKLHLGHAWDTTLQDILSRVKRMQGYDTLWLPGMDHAGIATQAK 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R+    L +S D      T ++   
Sbjct: 97  VEGKLREEGVSRYDLGREKFLEKSWEWKEEYADFIRNQWSKLGLSLDYSRERFTLDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                ++ K+ +KG IY+G Y   +  + +   +D EV  
Sbjct: 157 KAVNEVFVKLYEKGLIYRGEYIINWDPQTKTALSDIEVIY 196


>gi|291519933|emb|CBK75154.1| valyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 848

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 147/394 (37%), Gaps = 38/394 (9%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE            +   ++  +  V+ M +  +F  +       +   ++     +P 
Sbjct: 327 MDEMGLLVKIEDHTHNVGTHDRCNTTVEPMVKPQWFVAMEELAKPAIEAIKTGELQFVPK 386

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFD-----------------------------WGIKIP 221
                 + +++  ++D  +SR+ +                               G    
Sbjct: 387 NYDKTYLHWLE-NIRDWCISRQLWWGHRIPAYYCEKCGETVVAPASEAPTVCPKCGHTHM 445

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
              +  +  W  +     +T G+ +  +     F+P ++ V G DI+ F    + +  + 
Sbjct: 446 KQDEDTLDTWFSSALWPFSTLGWPEKTE-ELDYFYPTNVLVTGYDIIFFWVIRMVFSGYA 504

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP+E+I++ G DALR  L+   A G D 
Sbjct: 505 HTGKSPFNTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDKYGADALRLTLITGNAPGNDM 564

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  + ++   N   AN + N  SR + M L D +   P        D+ I+S  + + +
Sbjct: 565 RFYNERVENSRN--FANKVWN-ASRFIMMNLADNEVTEPAESELATEDKWIISAVNTLAK 621

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ ENM    +  A+ +V   + +   D Y +  KP           +  L+     +  
Sbjct: 622 DVTENMDKYELGIAVQKVYDFIWDQFCDWYIEIVKPRMYSTEYTASKNAALWTAKFALTN 681

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              +L  F+P +  +IF  L   +E     +  +
Sbjct: 682 ALKMLHPFMPFITEEIFCTLQSEEETIMLSAWPE 715



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 33  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRYKRMQGYSALWQPGTDHAAIATEVK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + D+      +    +  S  ++    T ++   
Sbjct: 93  VIEHLKKQGIEKDSLGREGFLEKCWEWKDEYGTRIINQLKKMGSSADWERERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPV 157
                ++ K+  +G IYKG     +    +   +D EV      G +++ ++  V
Sbjct: 153 KAVENVFVKLYKEGYIYKGNRIINWCPVCQTSISDAEVEHEEQAGHFWHMKYEIV 207


>gi|225574666|ref|ZP_03783276.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038134|gb|EEG48380.1| hypothetical protein RUMHYD_02743 [Blautia hydrogenotrophica DSM
           10507]
          Length = 739

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 82/384 (21%), Positives = 149/384 (38%), Gaps = 40/384 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F ++       +       +F+    R +++    
Sbjct: 338 VPHSHNVGTHDRCGTTVEPMIKPQWFVKMDEMAKAAIEVLNKDLKFV--PSRFDKIYLHW 395

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
              ++D  +SR+ +                             G       +  +  W  
Sbjct: 396 LENIRDWCISRQLWWGHRIPAYYCDECGQVEVAHEMPKKCSKCGCTHFTQDEDTLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        F+P D+ V G DI+ F    + + A   +   P    + 
Sbjct: 456 SALWPFSTLGWPEKTP-ELEYFYPTDVLVTGYDIIFFWVIRMVFSALEQTGKTPFHHVLI 514

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  LV   A G D  +  + ++   N
Sbjct: 515 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLVTGNAPGNDMRFYWEKVEASRN 574

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  SR + M L+      P        D  ILS  + V QE+ ENM+   + 
Sbjct: 575 --FANKVWN-ASRFILMNLEGKTVTEPDLAQLNPEDRWILSKLNTVAQEVTENMEKYELG 631

Query: 412 RALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            A+ ++   + +   D Y +  K   W+  +  P  A+  L+    V+ +   LL  F+P
Sbjct: 632 IAVQKIYDFLWDVFCDWYIEMAKVRIWK-AEEAPKEANDALWTLRTVLTEGLKLLHPFMP 690

Query: 468 KLANKIFDILFVADENRCFQSLDQ 491
            +  +I+  L   +E+       +
Sbjct: 691 FITEEIYCALLPQEESVMISQWPE 714



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 61/177 (34%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D++ RF R+ G + L+  GTD          
Sbjct: 35  DKKPFTIVMPPPNITGQLHMGHALDNTLQDIMIRFKRMQGYETLWQPGTDHAAIATEVKV 94

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + ++      +    + +S  +D    T ++    
Sbjct: 95  IEKLKEQGIDKNEIGREEFLKHAWAWKEEYGGRINNQLKKMGVSADWDRERFTMDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             + ++ ++ +KG IYKG     +    +   +D EV       ++     P+   E
Sbjct: 155 AVQEVFIRMYNKGYIYKGSRIINWCPVCKTSISDAEVEHEDQNGFFWHIKYPIVGEE 211


>gi|269214174|ref|ZP_06158403.1| methionine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144326|gb|EEZ70744.1| methionine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 463

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ AD   
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPSKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +        +D  +L+  +   + I E  +++   +AL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKDV-----ADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K      R   V    +     L   L   +PK+A      L +  E   + +  + L
Sbjct: 248 LAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPKVAENAAKFLNL--EAITWANTRETL 305

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 306 --GEHAINKYEHLMQR 319


>gi|182416784|ref|ZP_02948179.1| valyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667221|ref|ZP_04527205.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379364|gb|EDT76861.1| valyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655569|gb|EEP53125.1| valine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 880

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 147/385 (38%), Gaps = 40/385 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     V+ +  + ++ ++       +   ++     +P  R ++       
Sbjct: 341 HAHNVGTHDRCGTTVEPIISKQWYVKMDQLAKPAVEVVKNGETKFVPE-RFDKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            ++D  +SR+   WG +IP                            +    ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVYYCQDCGEMMVLEDAPSKCTKCGSTNVEQDNDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +     F+P  + V G DI+ F    + +         P    +  
Sbjct: 459 ALWPFSTLGWPNKTE-DLDYFYPNSVLVTGHDIIFFWVARMIFSGLHCMGETPFHTVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DP+EVI++ G DALR+ +    A G D  Y  + ++   N 
Sbjct: 518 GLIRDSQGRKMSKSLGNGVDPLEVIDQYGADALRFMIATGNAPGNDMRYYPERVESSRN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          ++ +D+ ILS  + +++E+ ENM+   +  
Sbjct: 577 -FANKIWNASRFVMMNLDKEIMNKYKDCKEYSLADKWILSEMNTLVKEVTENMEKYELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+++V   +     D Y +  KP      +         V   V+     LL   +P + 
Sbjct: 636 AMSKVYDFMWTEFCDWYIELIKP-VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFIT 694

Query: 471 NKIFDILFVADE--NRCFQSLDQRL 493
            +I+  L   +   N  +   D+ L
Sbjct: 695 EEIYTHLTEEETIVNAAWPEFDEAL 719



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA++  + D+L RF R+ G   L+  G D         
Sbjct: 36  KSKKPFTIVMPPPNITGQLHLGHAFDDTLQDILIRFKRMQGYCTLWLPGEDHASIATEVK 95

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + D+     R+    L +S  +     T ++   
Sbjct: 96  VANMLSDQGYDKKEMGREAFLEKVWEWSDKYRATIRNQVKKLGVSADFTREAFTMDENLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ K+ ++  IY+G     +    +   +D E+       ++   + P+
Sbjct: 156 AAVKHVFVKLYNEDLIYQGNRITNWCTHCQTALSDAEIEYEEQAGHFWHINYPL 209


>gi|255527336|ref|ZP_05394214.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184931|ref|ZP_06853342.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508983|gb|EET85345.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050713|gb|EFG90136.1| valyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 882

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 144/381 (37%), Gaps = 38/381 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++   + ++ M  + +F ++ +     L    +     +P  R  +       
Sbjct: 341 HAHNVGCHDRCGSTIEPMISKQWFVKMESLAKPALDVVRTKKVKFIPE-RFEKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVSVDEVTKCTKCGSDKLEQDKDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +        F+P    V G DI+ F    + +     + ++P    +  
Sbjct: 459 ALWPFSTLGWPEKTP-DFKYFYPNSTLVTGYDIIFFWVARMVFSGLYCADDIPFENVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DP++VI++ G DALR+ L+   A G D  Y  + ++   N 
Sbjct: 518 GIVRDSEGRKMSKSLGNGVDPLDVIDQYGADALRFTLITGNAPGNDIRYYPERVESSRN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  +  +          ++ +D+ ILS  + +++E+ +N++   +  
Sbjct: 577 -FANKIWNASRFVLMNLDGEIMNKYKDCKNYSSADKWILSRMNTLIKEVTDNIEKFELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  +V   +     D Y +  KP  +   + +       V   V+     LL   +P + 
Sbjct: 636 AAQKVYDFIWGEFCDWYIELVKP-VMYGDDEEAKGVAFNVLNNVLSTSLQLLHPIMPFIT 694

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L+   E+       +
Sbjct: 695 EEIYTHLYTDYESIVISKWPE 715



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  I D++ R  R+ G   L+  G D         
Sbjct: 36  ENKKPYTIVLPPPNITGKLHLGHALDDTIQDIIIRTKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +N                       + ++     R+    L  S D      T E++ +
Sbjct: 96  VENELLKQGLKKKEMGREAFLEKVWDWANEYRERIRNQVKQLGSSVDSTRECFTMEEKAN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R  + K+ ++G IY+G     +  + +   +D E+       ++     PV   +E
Sbjct: 156 KAVRTFFVKLYNEGLIYQGNRIINWCPKCQTAISDAEIEYSEQEGHFWHIKYPVVGSDE 214


>gi|217077950|ref|YP_002335668.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037805|gb|ACJ76327.1| valyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 864

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 105/496 (21%), Positives = 178/496 (35%), Gaps = 66/496 (13%)

Query: 36  RFHRLDGLDVLFT-------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  L G +V+            D H            VT     +      R   + ++
Sbjct: 236 RYKELIGKEVIVPLVGRKIKIIADMHADP-EFGTGALKVTPAHDPNDYLIGQRHNLEFIN 294

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           I  DD   T  +                 D Y+        L  E Y    E  K + G 
Sbjct: 295 IFKDDM--TINENGGK---------YKGLDRYQAREKIVEDLEKEGYLVKIEDIKHSVGH 343

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
            Y   +  ++ M  + +F ++    +K +   E       P  R  +V       ++D  
Sbjct: 344 CYR-CNTVIEPMLMDQWFVKMKPLAEKAIEAVEKGEVKFYPD-RWKKVYLNWMYEIRDWC 401

Query: 209 LSRKTFDWGIKI----PDDPQY------------------------IMYVWIDALTNYLT 240
           +SR+   WG +I      D  +                        ++  W  +     +
Sbjct: 402 ISRQ-LWWGHRIPIWYCQDCGHINVSEEEVKKCEKCGSTNLKQEEDVLDTWFSSALWPFS 460

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +N    K +F+P D+ V G DI+ F    +    +      P    V+ H  +  
Sbjct: 461 TLGWPENTSDLK-EFYPTDVLVTGFDIIFFWVARMVMMGYEFMGKKPF-NDVYIHQLVRD 518

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D   D   +        AN 
Sbjct: 519 KFGRKMSKSLGNGIDPLEVIQEYGADPMRFTLALLAAQGRDIKLDIKNIDTS--KKFANK 576

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N  +R + M L+DY            SD+ ILS   + ++ +   ++    + A  ++
Sbjct: 577 IWN-ATRFIIMNLEDY--KEIPLENLNLSDKWILSRLQKTIKNVTNAIEQYEFNLAAREI 633

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +   +   D Y +  KP        +    V  V V V+     LL  F+P +  +++ 
Sbjct: 634 YNFFWDEFCDWYIEVSKPRL----KTEEKHLVQNVLVTVLDNSLKLLHPFMPFITEELWQ 689

Query: 476 ILFVADENRCFQSLDQ 491
            L  + E+       +
Sbjct: 690 KLPTSGESITVSEWPK 705



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K  I         + H+GHA  + + D+L RF R++G   L+  G D  G     A
Sbjct: 32  KDGPKYSIVIPPPNITGKIHMGHALNITLQDILVRFKRMNGFKTLWVPGEDHAGIATQTA 91

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            + A                      + +      ++    +  S D      T ++   
Sbjct: 92  VEKAIEKEGKKREELGREKFLEIVWDWANTYRNTIKNQIMAIGASVDWTRERFTLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++  +  KG IYKG Y   +  R +   +D+EV  
Sbjct: 152 KAVKKVFVSLYKKGLIYKGKYIVNWCPRCKTVLSDEEVEY 191


>gi|118586620|ref|ZP_01544060.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|118432935|gb|EAV39661.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 918

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 78/361 (21%), Positives = 137/361 (37%), Gaps = 36/361 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    ++ L    + + +      R  +      + + D  +SR+   
Sbjct: 386 VEARLSTQWFVKMKPLAEQALKMQKQQNDKVDFWPIRFEDTYQTWMNNIHDWVISRQ-LW 444

Query: 216 WGIKIP--------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           WG +IP                           DP  ++  W  +     +T G+ D  +
Sbjct: 445 WGHRIPAWYRDTKEGEKETYVGLTAPKGDGWTQDPD-VLDTWFSSALWPFSTLGWPDTNN 503

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               +F+P    V G DI+ F    + + A   +   P    +        KG K+SKSL
Sbjct: 504 SDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEFTGTRPFKNVLIHGLIRDSKGRKMSKSL 563

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP++VI + G DALR+FL      G+D  +  D +    N    N I N+    + 
Sbjct: 564 GNGIDPMDVINKYGTDALRWFLSTGSTPGQDLNFSNDKMDSAWN--FINKIWNVSRYVLM 621

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            +  D    +P     T +D+ ILS  +  ++ + +N        A  Q+ + + +   D
Sbjct: 622 NLETDTKIELPDRNLLTLADKWILSRLNSTIENVTKNFDKFEFGEAGRQLYNFIWDDFAD 681

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   +      V  V   V+ Q   LL   +P +   I+  L    +N+ 
Sbjct: 682 WYIEMTK-ETLNNDSALNKRPVQQVLAYVLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQS 740

Query: 486 F 486
            
Sbjct: 741 L 741



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G       + 
Sbjct: 64  EAYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAKVEA 123

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + D+ +   ++    + +S D      T +K  ++  
Sbjct: 124 RLREDGISRYDLGREKFVDKVWQWKDEYASIIKEQWAKMGLSLDFSRERFTLDKGLNEAV 183

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 184 RKVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDD 223


>gi|78044410|ref|YP_359197.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|90103530|sp|Q3AF87|SYV_CARHZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77996525|gb|ABB15424.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 878

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 150/412 (36%), Gaps = 43/412 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L+D      +E    + G  Y      ++    + +F ++    
Sbjct: 310 YRGLDRYEARKKIVEDLKDLGLLVKEEEITHSVGHCYR-CDTVIEPRLSKQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--------------- 218
           +  +    +     +P  R  ++       ++D  +SR+   WG                
Sbjct: 369 EPAIEAALTGKVKFVPE-RFTKIYLNWLYNIRDWCISRQ-LWWGHRIPVWYCDECGEVIP 426

Query: 219 --------------KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                         K+  DP  ++  W  +     +T G+  N +  K  ++P  + V G
Sbjct: 427 SREEVKSCPKCQSTKVHQDPD-VLDTWFSSALWPFSTLGWPQNTEELK-YYYPTSVLVTG 484

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +DI+ F    + +        +P  + +     +  +G K+SKSLGN +DP+EVI   G 
Sbjct: 485 RDIIFFWVARMLFMGLEFMKEVPFKEVLIHGLVLDAQGRKMSKSLGNGVDPVEVIASHGA 544

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D+LR+ LV     G D  +  + L    N   AN + N  SR V M L+ +         
Sbjct: 545 DSLRFMLVTGNTPGNDLRFHFERLDGARN--FANKLWN-ASRFVLMNLEGFTPQGIKQEE 601

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
            T +D  IL+  + V+  +   +    +  A  ++   + +   D Y +  KP    K  
Sbjct: 602 LTLADRWILARLNAVIDRVTAFLDEYELGEAARELYEFIWDEFCDWYVELTKPRLYGKMP 661

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                T   V   V++    LL  F+P +  +I+  L    +        + 
Sbjct: 662 GG--DTAREVLYAVLKTTLELLHPFMPFITEEIWQRLPHEGKTIMLAPWPKG 711



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I         Q H+GHA +  + D+LAR+ R+ G + L+  GTD  G       
Sbjct: 34  EREPFCIVMPPPNVTGQLHMGHALDNTMQDILARYKRMQGFNTLWLPGTDHAGIATQAKV 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + +       +    L  S D      T ++   +
Sbjct: 94  EEELRKEGLTKDDLGREKFLERVWAWKENYGNRITEQLRTLGASCDWKRERFTLDEGCSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IY+  Y   +    +   +D EV  
Sbjct: 154 AVKEVFLRLYEKGLIYRDYYITNWCPHCKTTISDIEVEH 192


>gi|325678885|ref|ZP_08158483.1| valine--tRNA ligase [Ruminococcus albus 8]
 gi|324109389|gb|EGC03607.1| valine--tRNA ligase [Ruminococcus albus 8]
          Length = 897

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 139/378 (36%), Gaps = 42/378 (11%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            D       H+ ++ M  + +F ++    +  +   E      +P  R  +       G 
Sbjct: 364 HDVGTCYRCHSTIEPMISKQWFVKMKPLAEPAIQAVEEGKIKFVPE-RFTKTYLNWMRGT 422

Query: 205 KDLSLSRKTFDWGIKI----PDDPQYI------------------------MYVWIDALT 236
           +D  +SR+   WG +I     DD   I                        +  W  +  
Sbjct: 423 RDWCISRQ-LWWGHRIPAWYCDDCGEINVAKSAPCKCKKCGSTNLTQDEDSLDTWFSSAL 481

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +  G+ D        F+P    V G DI+ F    + +     +   P    +    
Sbjct: 482 WPFSILGWPDKQSDDFNYFYPTSTLVTGYDIIGFWVSRMIFSGLAYTGKAPFDTVLIHGI 541

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               +G K+SKSLGN IDP+ VI++ G DALR+ LV+  + G D  Y ++ +    N   
Sbjct: 542 VRDSQGRKMSKSLGNGIDPLVVIDQYGADALRFMLVQGSSPGNDMRYSEEKIVAMRN--- 598

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                N +  +   +L +        P   T  D+ ILS  ++V +E+  N+++  +  A
Sbjct: 599 ---FTNKIWNASRFLLMNMTIDKIELPKELTLEDKWILSSLNKVAKEVTYNLEHFEMGVA 655

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             +V   +     D Y +  K       +      V  V   V+  +  LL  F+P +  
Sbjct: 656 AQKVYDFIWNSFCDWYIELAK-NRFNGDDAQAKKNVENVLAYVLTDILKLLHPFMPFITE 714

Query: 472 KIFDILFVADENRCFQSL 489
           +I+  L   +     QS 
Sbjct: 715 EIYQALPHEEGFLMMQSW 732



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 19/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I+        Q H+GHA +  + D+L RF R+ G   L+  GTD          
Sbjct: 34  KKKPYSIAMPPPNVTGQLHMGHAVDNTMQDILTRFKRMQGYAALWIPGTDHAAIATEAKI 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      + ++      +    L  S D      T +++   
Sbjct: 94  VEAMRQEGLTKADLGREKFMERAWAWKEKFGGRIVEQLRTLGTSCDWEREHFTMDEQCSK 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWME 161
               ++ K+ ++G IY+G     +  + +   +D EV Y+  DG +++  +   +  E
Sbjct: 154 AVLEVFVKLYEEGLIYRGNRMVNWCPKCQTSISDAEVEYENKDGNFWHILYKVKETGE 211


>gi|290890940|ref|ZP_06554004.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
 gi|290479339|gb|EFD87999.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
          Length = 902

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 136/361 (37%), Gaps = 36/361 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    ++ L    + + +      R  +      + + D  +SR+   
Sbjct: 370 VEARLSTQWFVKMKPLAEQALKMQKQQNDKVDFWPVRFEDTYQTWMNNIHDWVISRQ-LW 428

Query: 216 WGIKIP--------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           WG +IP                           DP  ++  W  +     +T G+ D  +
Sbjct: 429 WGHRIPAWYRDTKEGEKETYVGLTAPKGDGWTQDPD-VLDTWFSSALWPFSTLGWPDTNN 487

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               +F+P    V G DI+ F    + + A   +   P    +        KG K+SKSL
Sbjct: 488 SDYKRFYPTSTMVTGYDIIFFWISRMIFQAKEFTGTRPFKNVLIHGLIRDSKGRKMSKSL 547

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP++VI + G DALR+FL      G+D  +  D +    N    N I N+    + 
Sbjct: 548 GNGIDPMDVINKYGTDALRWFLSTGSTPGQDLNFSNDKMDSAWN--FINKIWNVSRYVLM 605

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            +  D    +P       +D+ ILS  +  ++ + +N        A  Q+ + + +   D
Sbjct: 606 NLETDTKIELPDRNLLALADKWILSRLNSTIENVTKNFDKFEFGEAGRQLYNFIWDDFAD 665

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   +      V  V   V+ Q   LL   +P +   I+  L    +N+ 
Sbjct: 666 WYIEMTK-ETLNDDSALNKRPVQQVLAYVLDQTLRLLHPIMPFVTEAIWQQLPQHQDNQS 724

Query: 486 F 486
            
Sbjct: 725 L 725



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 20/161 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G       + 
Sbjct: 48  EAYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGLDHAGIATQAKVEA 107

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDT 105
                                  + D+ +   ++    + +S D F R   T +K  ++ 
Sbjct: 108 RLREDGISRYDLGREKFVDKVLQWKDEYASIIKEQWAKMGLSLD-FSRERFTLDKGLNEA 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 167 VRKVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDD 207


>gi|302871712|ref|YP_003840348.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574571|gb|ADL42362.1| valyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 874

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 151/383 (39%), Gaps = 39/383 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++       +   +      +P  R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAKPAIRVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKVCSKCGSSNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K  F+P D+ V   DI+ F    + + A       P   
Sbjct: 449 WFSSALWPFSTLGWPEETEDLK-YFYPTDVLVTAYDIIFFWVARMIFSALEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L          V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +  +I+  L   +E+    + 
Sbjct: 684 PFVTEEIYLNLPHVEESLVIATW 706



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|299535625|ref|ZP_07048946.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728825|gb|EFI69379.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 881

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 136/365 (37%), Gaps = 36/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    D  L   +    +      R     S     ++D  +SR+   
Sbjct: 355 VEPYLSAQWFVKMQPLADASLELQKDEEGKVNFVPARFENTYSRWMENIRDWCISRQ-LW 413

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D  +   
Sbjct: 414 WGHQIPAWYHNETGEIYVGKEAPADAENWTQDEDVLDTWFSSALWPFSTMGWPDEANEEY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTNTLVTGYDIIFFWVSRMIFQGLEFTDQRPFKDVLIHGLVRDGEGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VIE+ G D+LRYFL    + G+D  Y  + ++   N   AN I N  SR   M +
Sbjct: 534 VDPMDVIEQYGADSLRYFLATGSSPGQDLRYTTEKVEAVWN--FANKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  + +D+ IL+  +  ++ +    +         ++ + + +     Y
Sbjct: 591 DGMTYDEIDLTGEKSVADKWILTRLNETIERVTSLAERYEFGEVGRELYNFIWDDFCSWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   +   V+ Q   LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGEDDVAKKTTRSILAYVLDQTMRLLHPFMPFITEEIWQHLPHEGESITV 708

Query: 487 QSLDQ 491
            +   
Sbjct: 709 AAWPT 713



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  SGKKPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAGIATQAK 95

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            +                     T  + ++ + + RD      L + Y     T +K   
Sbjct: 96  VEAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGLDYTRERFTLDKGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D  + ++ ++ +KG IY+G     +    +   +D EV  
Sbjct: 156 DAVKTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIY 195


>gi|288574913|ref|ZP_06393270.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570654|gb|EFC92211.1| valyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 887

 Score =  199 bits (507), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 83/388 (21%), Positives = 147/388 (37%), Gaps = 47/388 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            ++ Y    E      G  Y   +  V+    E +F +     D+ +   E+     LP 
Sbjct: 332 EEQGYLKKVEDLPHQVGHCYR-CNTVVEPYLSEQWFVKAKPLADRGVQSVENGEIRWLPE 390

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY-------------------- 226
                   +++  ++D  +SR+   WG +I      D  +                    
Sbjct: 391 HWTKTYYQWME-NIRDWCISRQ-LWWGHRIPAWTCQDCGHIVVAEEDPTGCPKCGSSDLI 448

Query: 227 ----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
               ++  W  +     +T G+ D  +     F+P  L V G DI+ F    W + ++  
Sbjct: 449 QDEDVLDTWFSSALWPFSTLGWPDKTE-ELEHFYPTSLMVTGFDIIFF----WVSRMIMM 503

Query: 283 NLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    ++  +   +       +G+K+SKS GNVIDP+ +I++ G DALR+ +      G
Sbjct: 504 GLEFMDEIPFNDVYIHALVRDEQGQKMSKSKGNVIDPLIMIDQFGADALRFTVAALTMPG 563

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D       ++        N I N  SR   M L D D   P        D+ I+   S+
Sbjct: 564 RDILLSPSKIEN--YRHFLNKIWN-ASRFALMNLGDSDPSRPDEKDLRLHDKWIMDRLSK 620

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           V  ++ + +   LI  A   +   +     D Y +  KP        DR    L+V ++V
Sbjct: 621 VNSQVTDYLDEYLIGDAARLLYDFIWGDLCDWYVEMSKPALWGDEGEDRKEATLWVLLDV 680

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE 482
            ++   LL  F+P L  +++       E
Sbjct: 681 FKETLSLLHPFIPFLTEELWQAFGFGQE 708



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+E   I           H+GHA+     D++ R+ R+ G +VL+  GTD  G      
Sbjct: 37  KEKEAFSIVIPPPNVTGSLHMGHAFNNTFQDIICRYKRMRGYNVLWLPGTDHAGIATQNV 96

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + + ++     + + +  D     F  T ++ 
Sbjct: 97  VERELAKEGISRHDMSREDFIDRVWAWKEEYGNRIINQQKKLGNSCDWRRLRF--TMDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++ +KG IY+G Y   +  R +   +D EV  
Sbjct: 155 LSKAVRAVFVRLYEKGLIYRGKYIINWCPRCQTALSDLEVEH 196


>gi|222151545|ref|YP_002560701.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120670|dbj|BAH18005.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 875

 Score =  199 bits (507), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 137/362 (37%), Gaps = 34/362 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++   ++ L+  ++         R     +    G+ D  +SR+   W
Sbjct: 349 VEPYLSTQWFVKMAPLAEQALNNQKTEGRIEFVPNRFEGTFNRWMEGIHDWCISRQ-LWW 407

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 408 GHQIPAWYHKETGELYVGKEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPDTETIDYK 467

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            F+P ++ V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 468 TFYPTNVLVTGYDIIFFWVARMIFQGLEFTGKRPFDDVLIHGLVRAEDGRKMSKSLGNGV 527

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G+D  Y  + ++   N    N I N    S+  I +
Sbjct: 528 DPMDVIDQYGADSLRYFLATGSSPGQDLRYSTEKVEAAWN--FINKIWNASRFSLMNIGE 585

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +DE IL+  +  + ++    +          + + + +   D Y 
Sbjct: 586 DFKAEHIDLSGKKSLADEWILTRLNETIADVTRLAEKYEFGEVGRVLYNFIWDEFCDWYI 645

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   +  +      V    +  +  +L  F+P +   I+  L V  ++    
Sbjct: 646 EMSKIP--MNGEDEVQKQMTRSVLAYTLDSIMRMLHPFMPFVTEHIWQNLPVTGDSIVTA 703

Query: 488 SL 489
           S 
Sbjct: 704 SW 705



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + HIGHA++  + D++ R  R+ G + L+  G D  G      
Sbjct: 30  SDKKPYTIVIPPPNVTGKLHIGHAWDTTLQDIITRMKRMQGYNTLYLPGMDHAGIATQAK 89

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T  + ++ +   R     L +  D      T ++   
Sbjct: 90  VEAKLREEGVSRHDIGRTKFLEHTMEWKEEYAGFIRQQWAKLGLGLDYSRERFTLDEGLS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  + ++ K+ +KG IY+G     +        +D EV  
Sbjct: 150 EAVKEVFVKMYEKGLIYRGERIINWDPVARTALSDIEVIH 189


>gi|307719496|ref|YP_003875028.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533221|gb|ADN02755.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 882

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 82/375 (21%), Positives = 143/375 (38%), Gaps = 39/375 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E        +    H PV+    E +F R+     K L  +E       P +  N   +
Sbjct: 338 KEEPHVHQVGHCYRTHVPVEPYLSEQWFVRMDTMAQKALKAWEEGKIQFFPRKWENT-YT 396

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYV 230
                ++D  +SR+   WG  I +                                ++  
Sbjct: 397 HWLRNIRDWCISRQ-LWWGHRIPVWYCDDCGAQMVLREDPTSCTSCGSTKIRQDEDVLDT 455

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K +F+P    V   DI+ F    +   +      +P   
Sbjct: 456 WFSSWLWPFSTLGWPEETEDLK-RFFPTTTLVTAYDIIFFWVARMIMASLEFMHEVPFRD 514

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              +      +G K+SKSLGN IDP+E++EE G DALR+ L    A G+D   DK+  + 
Sbjct: 515 IYITGLVRDKQGRKMSKSLGNGIDPLEIVEEYGADALRFTLAFLAAQGQDVLLDKETFQ- 573

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            V A  AN I N  SR + M L+    +       T+ D  IL   ++ ++ +R+ ++  
Sbjct: 574 -VGAHFANKIWN-ASRFILMNLEGRTLIPFEEIETTDVDRWILHRLNQTIRTVRDALETY 631

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             + A             D Y ++ K   L   +      V+ + + V+ Q   LL  F+
Sbjct: 632 RFNEAAQTAYEFFWSDFCDWYIESAK-RSLNGDDEREKDRVVSLLLFVLEQALKLLHPFL 690

Query: 467 PKLANKIFDILFVAD 481
           P +  +++  L   +
Sbjct: 691 PFVTEELYQKLPTTE 705



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 22/179 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GH     + D+L R+HR+ G   L+  GTD  G       + 
Sbjct: 39  KPFVIVIPPPNVTGVLHMGHGLNNSLQDILIRYHRMKGEPTLWLPGTDHAGIATQSVVER 98

Query: 65  AGV----TTK--------VFVDQNSRNFRD--------MADVLDISYDDFIRTTEKRHHD 104
                    +            Q++   ++        +    D S + F  T ++    
Sbjct: 99  KLWAQGVDPRSLGREKFVEITWQHALEHKEIIINQLKKIGASCDWSRERF--TLDEGLSR 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             R ++  + +KG IY+G Y   +S   +    DDEV              PV   EE+
Sbjct: 157 AVREVFVSLYEKGLIYRGTYLVNWSPGLKTALADDEVEYKEVQGKLYYILYPVADSEEK 215


>gi|282916924|ref|ZP_06324682.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319411|gb|EFB49763.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 876

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 134/364 (36%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   +  +      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNDEAQKQITRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|258404389|ref|YP_003197131.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796616|gb|ACV67553.1| valyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 886

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 77/388 (19%), Positives = 140/388 (36%), Gaps = 23/388 (5%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K + + G  Y+       ++  + +     + K A     + +   V     +  +F   
Sbjct: 342 KYLHNVGHCYRCDTPIEPTVSKQWFVAVGPLAKRARDAVADGKTRIV-PGNWDKTYFEWL 400

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                     +      +P     E        +          D G       + ++  
Sbjct: 401 DNIRDWCISRQIWWGHRIPAWTCQECGKL----IVSREDPTVCPDCGHTSLHQDEDVLDT 456

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
           W  +     +T G+ D      A F+P  + V G DIL F    W A ++   L    +V
Sbjct: 457 WFSSALWPFSTLGWPDETQ-ELATFYPTSVLVTGFDILFF----WVARMMMMGLHFKDEV 511

Query: 291 FSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             H   +        G K+SKS GNVIDP++++ + G DALR+ L    A G+D    + 
Sbjct: 512 PFHDVYIHALVRDEDGRKMSKSTGNVIDPLDMVAKYGTDALRFTLTAFAAMGRDIKLSEK 571

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++        N I N    ++  +  D     P P   +     IL     V Q +   
Sbjct: 572 RIEG--YRHFMNKIWNAARFALMHLPGDMGEPEPDPSD-SLVHRWILHRLEEVKQAVGAA 628

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++    + A  ++   V     D Y +  KP EL   +    +    V   V+R++ +LL
Sbjct: 629 LEEYRFNDAAQELYQFVWHEVCDWYLEMVKP-ELYGEDEAAKNRARSVLHTVLREVLVLL 687

Query: 463 QAFVPKLANKIFDIL-FVADENRCFQSL 489
              +P +  +I++ L  V + +   + L
Sbjct: 688 HPTIPFITAEIWNSLPGVGERDLAVEPL 715



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA  + + D+L R++R  G  VL+  GTD  G       
Sbjct: 38  GQPPYSIVIPPPNVTGTLHMGHALNLTLQDILCRYNRQKGKKVLWVPGTDHAGIATQNVV 97

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           + A                        + +  +     + M   +D S   F  T ++  
Sbjct: 98  EKALAQEGTTRQELGREAFVERVWQWKEEYGGKILNQIQRMGASVDWSRLRF--TMDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++ + G IY+G Y   +  R      D EV  
Sbjct: 156 SRAVREVFVQLYEDGLIYQGNYIINWCPRCHTALADLEVEY 196


>gi|170288799|ref|YP_001739037.1| valyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176302|gb|ACB09354.1| valyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 865

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 159/411 (38%), Gaps = 47/411 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L ++ +    E Y  + G  Y      ++    + +F       
Sbjct: 309 YKGLDRYEAREKIVKDLEEQGFLVKIEDYTHSVGHCYR-CDTVIEPKLSDQWFVSTKPLA 367

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY--- 226
            + +   E+      P  R  +V       ++D  +SR+   WG +I      D  +   
Sbjct: 368 KRAIEAVENGEIRFFPE-RWTKVYLNWMYEIRDWCISRQ-LWWGHRIPVWYCQDCGHLNV 425

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ +  +  K +++P DL V G 
Sbjct: 426 SEEDVEKCEKCGSTNLKQDEDVLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGF 484

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGV 322
           DI+ F    +    +    + P    V+ H  +  K G K+SKSLGN IDP+EVI+E G 
Sbjct: 485 DIIFFWVARMIMMGYEFMNDKPF-SHVYIHQLVRDKYGRKMSKSLGNGIDPLEVIDEYGA 543

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D +R+ L    A G+D   D            AN I N  +R V M L+DY         
Sbjct: 544 DPMRFTLAILAAQGRDIKLDPRYFDA--YKKFANKIWN-ATRFVLMNLEDY--KEVPLEN 598

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
               D+ IL+  ++ ++E+   ++N   + A   + +   +   D Y +A KP       
Sbjct: 599 LKTVDKWILTRLNKTVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKPRL----K 654

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +  + V  V V+V+     LL  F+P L  +++  L VA E+       +
Sbjct: 655 TEERNLVQTVLVKVLDASLRLLHPFMPFLTEELWQKLPVAGESITIAKWPE 705



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 19/177 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  I         + H+GHA  + + D++ R+ R+ G DVL+  G D  G     A + 
Sbjct: 34  EKFSIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEK 93

Query: 65  AGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             + T+                  + ++  R  R+    L  S D      T ++     
Sbjct: 94  FLLQTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASVDWTRERFTLDEGLSRA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            R ++ ++  KG IY+G Y   +  R +   +D+EV              PV+  +E
Sbjct: 154 VRKVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEEVEHKEHKSKLYYVKYPVKDSDE 210


>gi|220928627|ref|YP_002505536.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998955|gb|ACL75556.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 883

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 77/369 (20%), Positives = 142/369 (38%), Gaps = 40/369 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +          V+ +  + ++ R+    +  +    +     +P  R +++     
Sbjct: 340 PHSHNVGTCQRCRTVVEPLISKQWYVRMKPLAEPAIDVVRNGTIKFVPE-RFSKIYFNWM 398

Query: 202 SGLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWI 232
             ++D  +SR+   WG +IP                              DP   +  W 
Sbjct: 399 ENIQDWCISRQ-LWWGHRIPAYYCQECGHMMVQGTAPDTCSKCGSNRIEQDPD-TLDTWF 456

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +  +     F+P D+ V G DI+ F    + +         P     
Sbjct: 457 SSALWPFSTLGWPEKTE-DLEYFYPTDVLVTGYDIIFFWVARMIFSGVEHMKQEPFKYVF 515

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI + G DALR+ L    + G D  +  + ++   
Sbjct: 516 IHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGTDALRFALTIGNSPGNDLRFSPEKVESAR 575

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N     +    ++ D        F+ +D+ I+S  + V +E+ EN++   +
Sbjct: 576 N--FANKVWNASRFVLMNFDENLDFSKVDKKKFSIADKWIMSRINTVTKEVSENIEKFEL 633

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              L +V   + E   D Y +  KP +L     +      YV   V+R    LL  ++P 
Sbjct: 634 GLGLQKVYDFIWEEFCDWYIEMVKP-KLYDRESEGRLEAQYVLNFVLRNAMKLLHPYMPF 692

Query: 469 LANKIFDIL 477
           +  +I+  L
Sbjct: 693 VTEEIYTHL 701



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D+L R  R+ G   L+  GTD         
Sbjct: 36  KNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRTKRMQGYSALWLPGTDHASIATEAK 95

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
             +A                        KV+  +     + +    D   + F  T ++ 
Sbjct: 96  IVDAMAKEGISKDMLGREKFLEKAWEWKKVYGGRIVEQLKKLGSSCDWERERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                + ++ K+ DKG IYKG     +  +     +D EV        +     PV+  +
Sbjct: 154 LSRAVQEVFLKLYDKGLIYKGERITNWCPKCNTSISDIEVEYEEQAGNFWHIKYPVKDSD 213

Query: 162 E 162
           E
Sbjct: 214 E 214


>gi|238917219|ref|YP_002930736.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872579|gb|ACR72289.1| valyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 920

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 78/384 (20%), Positives = 146/384 (38%), Gaps = 16/384 (4%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
              + G   +   +    ++ + +   DE+ K A  +        +     +  ++  + 
Sbjct: 377 HTHNVGTHDRCKTTVEPMIKQQWFVKMDELIKPAV-EGVKNGDIELIPASMDKTYYNWTD 435

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
                    +      +P     +                     G    +     +  W
Sbjct: 436 NIRDWCISRQLWWGHRIPAYYCKDCGEMT----VSRDKVCTCPKCGSANVEQDPDTLDTW 491

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
             +     +T G+ D        F+P D+ V G DI+ F    + +  +      P  K 
Sbjct: 492 FSSALWPFSTLGWPDKTP-ELDYFYPTDVLVTGYDIIFFWVIRMIFSGYEHMGKKPFGKV 550

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F       +G K+SKSLGN IDP+EVI++ G DALRY L+   A G D  +    ++  
Sbjct: 551 LFHGLVRDDQGRKMSKSLGNGIDPLEVIDKYGADALRYTLITGNAPGNDMRFYWSRVEAS 610

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQN 407
            N   AN + N  SR + M   D         P   T++D+ ILS  + +++E+ +NM+ 
Sbjct: 611 RN--FANKVWN-ASRFIMMNDPDNKIKATDARPANLTDADKWILSKMNGLIKEVTDNMEK 667

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  A+A++   + E   D Y +  KP      +  + + +      V+     LL  +
Sbjct: 668 YELGIAVAKLNDFIWEEFCDWYIEMVKPRLYNDADETKTAAIW-TLKTVLIDALKLLHPY 726

Query: 466 VPKLANKIFDILFVADENRCFQSL 489
           +P +  +IF  +   +E+    S 
Sbjct: 727 MPFITEEIFCNIQDEEESIMISSW 750



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA +  + D++ RF R+ G + L+  GTD         
Sbjct: 71  RDKKPFTIVMPPPNITGKLHMGHALDNTMQDIIIRFKRMQGYEALWIPGTDHASISTEVK 130

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             NA                   T  +  +           +  S  +D    T ++   
Sbjct: 131 VTNALKEEGIDKHELGREGFLKRTWEWKKEYGGTITSQLKKIGSSCDWDRERFTMDEGCS 190

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ K+ +KG IYKG     +        +D EV       ++   + PV
Sbjct: 191 KAVQEVFIKLYEKGLIYKGSRIVNWCPVCNTSISDAEVEHEEQAGHFWHINYPV 244


>gi|15644561|ref|NP_229614.1| valyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|148270232|ref|YP_001244692.1| valyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281412433|ref|YP_003346512.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|12585357|sp|Q9X2D7|SYV_THEMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4982399|gb|AAD36880.1|AE001819_3 valyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|147735776|gb|ABQ47116.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281373536|gb|ADA67098.1| valyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 865

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 159/411 (38%), Gaps = 47/411 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L ++ +    E Y  + G  Y      ++    + +F       
Sbjct: 309 YKGLDRYEAREKIVKDLEEQGFLVKIEDYTHSVGHCYR-CDTVIEPKLSDQWFVSTKPLA 367

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY--- 226
            + +   E+      P  R  +V       ++D  +SR+   WG +I      D  +   
Sbjct: 368 KRAIEAVENGEIRFFPE-RWTKVYLNWMYEIRDWCISRQ-LWWGHRIPVWYCQDCGHLNV 425

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ +  +  K +++P DL V G 
Sbjct: 426 SEEDVEKCEKCGSTNLKQDEDVLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGF 484

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGV 322
           DI+ F    +    +    + P    V+ H  +  K G K+SKSLGN IDP+EVI+E G 
Sbjct: 485 DIIFFWVARMIMMGYEFMNDKPF-SHVYIHQLVRDKYGRKMSKSLGNGIDPLEVIDEYGA 543

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D +R+ L    A G+D   D            AN I N  +R V M L+DY         
Sbjct: 544 DPMRFTLAILAAQGRDIKLDPRYFDA--YKKFANKIWN-ATRFVLMNLEDY--KEVPLEN 598

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
               D+ IL+  ++ ++E+   ++N   + A   + +   +   D Y +A KP       
Sbjct: 599 LKTVDKWILTRLNKTVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKPRL----K 654

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +  + V  V V+V+     LL  F+P L  +++  L VA E+       +
Sbjct: 655 TEERNLVQTVLVKVLDASLRLLHPFMPFLTEELWQKLPVAGESITIAKWPE 705



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 19/177 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  I         + H+GHA  + + D++ R+ R+ G DVL+  G D  G     A + 
Sbjct: 34  EKFSIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEK 93

Query: 65  AGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             + T+                  + ++  R  R+    L  S D      T ++     
Sbjct: 94  FLLQTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASVDWTRERFTLDEGLSRA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            R ++ ++  KG IY+G Y   +  R +   +D+EV              PV+  +E
Sbjct: 154 VRKVFVELYRKGLIYRGKYIVNWCPRCKTVLSDEEVEHKEHKSKLYYVKYPVKDSDE 210


>gi|126653698|ref|ZP_01725617.1| valyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589735|gb|EAZ83870.1| valyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 881

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 136/365 (37%), Gaps = 36/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++    D  L   +    +      R     S     ++D  +SR+   
Sbjct: 355 VEPYLSAQWFVKMQPLADSSLELQKDQEGKVNFVPARFENTYSRWMENIRDWCISRQ-LW 413

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D  +   
Sbjct: 414 WGHQIPAWYHNETGEIYVGKEAPADADNWTQDEDVLDTWFSSALWPFSTMGWPDEANEEY 473

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 474 KRYYPTNTLVTGYDIIFFWVSRMIFQGLEFTEQRPFKDVLIHGLVRDGEGRKMSKSLGNG 533

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VIE+ G D+LRYFL    + G+D  Y  + ++   N   +N I N  SR   M +
Sbjct: 534 VDPMDVIEQYGADSLRYFLATGSSPGQDLRYTTEKVEAVWN--FSNKIWN-ASRFALMNM 590

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                      G  + +D+ IL+  +  ++ +    +         ++ + + +     Y
Sbjct: 591 DGMTYDEIDLTGEKSVADKWILTRLNETIERVTSLAERYEFGEVGRELYNFIWDDFCSWY 650

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L   +     T   +   V+ Q   LL  F+P +  +I+  L    E+   
Sbjct: 651 IEMAKLP--LYGEDETAKKTTRSILAYVLDQTMRLLHPFMPFITEEIWQHLPHDGESITV 708

Query: 487 QSLDQ 491
            +   
Sbjct: 709 AAWPT 713



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  SGKEPYSIVIPPPNVTGKLHLGHAWDTTLQDILIRMKRMQGYDALWLPGMDHAGIATQAK 95

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            +                     T  + ++ + + RD      L + Y     T +K   
Sbjct: 96  VEAKLREDNITRYDLGREKFLEKTWEWKEEYAGHIRDQWAKLGLGLDYTRERFTLDKGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ +KG IY+G     +    +   +D EV  
Sbjct: 156 EAVNTVFVQLYEKGLIYRGERIINWDPAAKTALSDIEVIY 195


>gi|150016655|ref|YP_001308909.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903120|gb|ABR33953.1| valyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 881

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/385 (19%), Positives = 145/385 (37%), Gaps = 40/385 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     V+ +  + ++ ++ +     +   ++     +P  R +++      
Sbjct: 342 HAHNVGTHDRCGTTVEPIISKQWYVKMESLAKPAVEVVKNGKTKFVPE-RFDKIYFNWME 400

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            ++D  +SR+   WG +IP                                 ++  W  +
Sbjct: 401 NIQDWCISRQ-LWWGHRIPVYYCQDCGEMMVLEDAPKACTKCGSSNIKQDNDVLDTWFSS 459

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +     F+P    V G DI+ F    + +         P    +  
Sbjct: 460 ALWPFSTLGWPNKTE-DLEYFYPTSTLVTGHDIIFFWVARMIFSGLHCMGETPFNTVLIH 518

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DP+EVIE  G DALR+ +    A G D  Y  + ++   N 
Sbjct: 519 GLIRDSQGRKMSKSLGNGVDPLEVIETYGADALRFMIATGNAPGNDMRYYPERVESSRN- 577

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          ++ +D+ ILS  + +++E+ ENM+   +  
Sbjct: 578 -FANKIWNASRFVMMNLDKEVMNKYKDCKEYSLADKWILSEMNTLIKEVTENMEKYELGI 636

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V   +     D Y +  KP      +      V  V   V+     LL   +P + 
Sbjct: 637 AMQKVYDFMWTEFCDWYIELVKP-VFYGEDEKAKGIVYNVLNTVLITGLKLLHPAMPFIT 695

Query: 471 NKIFDILFVADENRC--FQSLDQRL 493
            +IF  L   +      +   D+ L
Sbjct: 696 EEIFTHLSDEETITTSAWPEFDEAL 720



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA++  + D+L RF R+ G   L+  G D         
Sbjct: 37  KNKKPYTIIMPPPNITGQLHLGHAFDDTLQDMLIRFKRMQGYCTLWLPGEDHASIATEVK 96

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + D+     R+    L +S  +     T ++   
Sbjct: 97  VANQLAEQGYDKKEMGREAFLEKVWEWSDKYRATIRNQVKKLGVSADFTREAFTMDENLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ K+ ++G IY+G     +    +   +D E+       ++   + P+
Sbjct: 157 AAVKHVFVKLYNEGLIYQGNRITNWCTHCQTALSDAEIEYEEQAGHFWHINYPL 210


>gi|258516479|ref|YP_003192701.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780184|gb|ACV64078.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 881

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 146/374 (39%), Gaps = 39/374 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    +  ++ M  + +F R+    +  +          +P  R  ++       ++D  
Sbjct: 346 HCYRCNTVIEPMLSKQWFVRMRPLAEPAIKAAVDGSVKFIPE-RFTKIYLNWMENIRDWC 404

Query: 209 LSRKTFD------W----------------------GIKIPDDPQYIMYVWIDALTNYLT 240
           +SR+ +       W                      G ++  DP  ++  W  +     +
Sbjct: 405 ISRQLWWGHRIPVWYCRACDELVASKTPVTVCPKCGGTQLEQDPD-VLDTWFSSALWPFS 463

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK 299
           T G+       K  F+P  + V G+DI+ F         L     +P ++VF HG +L  
Sbjct: 464 TLGWPSETAELK-HFYPTSVLVTGRDIIFFWVARMIFSGLEFMEEVPFREVFIHGLVLDA 522

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDPI++IE  G D+LR+ LV     G D  +  + L    N   AN +
Sbjct: 523 LGRKMSKSLGNGIDPIDLIESHGADSLRFMLVTGNTPGNDLRFHFERLDGARN--FANKL 580

Query: 359 GNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR   M L DYD   P     ++ +D  ++S     ++ + +N++   +  A   +
Sbjct: 581 WN-ASRFSLMNLSDYDPEKPVDSQDYSLADRWMISRYQATVKSVTKNLEAYELGEAARSL 639

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP    K       T   V   V++    LL  F+P +  +I+ 
Sbjct: 640 YEFIWGEFCDWYLELIKPRVYGKEGEKARHTAQRVLASVLKGTLELLHPFMPFITEEIWQ 699

Query: 476 ILFVADENRCFQSL 489
            L    +     + 
Sbjct: 700 HLPHDGQTVMHAAW 713



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I         Q H GHA +  + D+L RF R+ G + L+  GTD  G       + 
Sbjct: 38  KPFCIVMPPPNVTGQLHGGHALDNTLQDILTRFRRMQGCNTLWLPGTDHAGIATQAKVEE 97

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + ++           L  S D      T ++      
Sbjct: 98  QLAQEGTTKHELGREKFLERVWAWKERYGGRITHQLRRLGASCDWERERFTMDEGCSSAV 157

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           R ++ ++ +KG IY+G Y   +  +     +D EV  
Sbjct: 158 REVFIRLYEKGLIYRGNYITNWCPKCHTTISDIEVEH 194


>gi|313115499|ref|ZP_07800964.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622209|gb|EFQ05699.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 922

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/390 (21%), Positives = 153/390 (39%), Gaps = 40/390 (10%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +  + E  K   G  Y   H+ ++ M  + +F ++       +   E      +P  R  
Sbjct: 376 FLKEIEPLKHEVGTCYR-CHSTIEPMVSKQWFVKMEPLAKPAIESVEKGEIKFVPE-RFT 433

Query: 195 EVISFVKSGLKDLSLSRKTFDWGI-----------------------------KIPDDPQ 225
           +         +D  +SR+   WG                              K+  DP 
Sbjct: 434 KNYMNWMKNTRDWCISRQ-LWWGHQIPAWYCDDCGETVVAKSAPCACPKCGSAKLTQDPD 492

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
             +  W  +     +T G+ +        F+P +  V G DI+ F    + +     +  
Sbjct: 493 -TLDTWFSSALWPFSTLGWPNEESEDLKYFYPTNTLVTGYDIIGFWVSRMIFSGLAYTGK 551

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P             +G K+SKSLGN IDP+EVI + G DALR+ LV     G D  Y +
Sbjct: 552 APFSTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDGSTPGNDMRYIE 611

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             ++   N   AN + N     +  + +D+   +P+      SD+ +L+  ++V   + +
Sbjct: 612 KKVEAARN--FANKLWNATRFVLMNLPEDFTPGLPSEDKLDMSDKWVLTKLNQVAGAMTD 669

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           N+ +  +  A A++ S + +   D + +  KP  L   + ++A T   V V V+ +   L
Sbjct: 670 NLDHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAEQADTARRVLVYVLDKALKL 728

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           L  F+P +  +++  L  + E    QS   
Sbjct: 729 LHPFMPFITEELYQALPGSAETIMTQSWPT 758



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R  R+ G   L+  GTD          
Sbjct: 55  DKKPYTIVMPPPNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKV 114

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
             A                      +  +           L  S  +D    T ++   +
Sbjct: 115 VEAMRAEGLTKEMVGRDGFLDRAWAWKTKYGNRIVSQLKKLGSSCDWDRERFTMDEGCSE 174

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ DKG IY+G     +        +D EV        +     PV
Sbjct: 175 AVKEVFVRLYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLYPV 227


>gi|283770729|ref|ZP_06343621.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460876|gb|EFC07966.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 876

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 134/364 (36%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+     + L   ++        +R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 DFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   N  +      V    +  +  +L  F+P +  KI+  L    +     
Sbjct: 648 EMSKIP--MNGNNEAQKQITRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKA 705

Query: 488 SLDQ 491
           S  +
Sbjct: 706 SWPE 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +       +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++  + +KG IY+G     +  +     +D EV  
Sbjct: 150 LSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIH 191


>gi|227544234|ref|ZP_03974283.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908230|ref|ZP_07125696.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185787|gb|EEI65858.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894657|gb|EFK88013.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 907

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 134/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   ++        ER     +     + D  +SR+   W
Sbjct: 382 VEARLSTQWFVKMKPLAEAALKNQDTDDRVNFVPERFEHTFTQWMENIHDWVISRQ-LWW 440

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ +       
Sbjct: 441 GHRIPAWYNKQTGEVYVGMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFK 500

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 501 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGQAPFKNVLLHGLIRDEQGRKMSKSLGNGI 560

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ GVDALR+FL+     G+D  +    +    N    N I N     +  + +
Sbjct: 561 DPMDVIKKYGVDALRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWNASRYVIMNLGE 618

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
               ++P    +  +D  ILS  +  ++++ E         A   + + +     D Y +
Sbjct: 619 MPAPVLPDKSKWDLADRWILSRLNATVKQVNEQFDKFEFGEAGRALYNFIWNDFCDWYIE 678

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K  +L     +  +    +   V+ Q   +L   +P +  K++  +    E+
Sbjct: 679 MTK-EKLNNGTDEEKNDTKNILGYVLDQTLKMLHPIMPFVTEKLWQSMPHDGES 731



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 58  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAK 117

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 118 VEARLRKQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDHERFTLDEGLN 177

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 178 KAVRKVFVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDD 220


>gi|330718899|ref|ZP_08313499.1| valyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 873

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 140/352 (39%), Gaps = 36/352 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           PV+      +F +++   +++L+  +    +     ER  +  +     ++D  +SR+  
Sbjct: 342 PVESRLSTQWFVKMAPLAEQILAMQQKPDEKVNFVPERFEDTFTHWMENIRDWVISRQ-L 400

Query: 215 DWGIKI-------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
            WG +I                          +  + ++  W  +     +T G+ +  D
Sbjct: 401 WWGHQIPAWYKNKNTDQEEIYVGQEAPEGEGWERDEDVLDTWFSSALWPFSTMGWPEKTD 460

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
           G  A+++P +  V G DI+ F    + +     +   P    +        +G K+SKSL
Sbjct: 461 GDFARYYPTNTLVTGYDIIFFWVARMMFQGKEFTGERPFKNVLIHGLIRDGEGRKMSKSL 520

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP++VIE+ G DALR+FL      G+D  +  + +    N    N I N     + 
Sbjct: 521 GNGVDPMDVIEKYGADALRWFLATGSTPGQDTRFTYEKMDASWN--FINKIWNASRYVIM 578

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
            + +D    +P     T +D+ ILS  +  +  +  N        A  ++ + +     D
Sbjct: 579 NLAEDTPTKLPDFDKLTLADKWILSRLNTTIANVTRNFDKFEFGEAGRELYNFIWSDFAD 638

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  K  E    + D+   V      V+ Q   LLQ  +P +   I+  +
Sbjct: 639 WYIEMTK--ETLNGDGDK-QPVQQTLAYVLDQTLKLLQPIMPFVTEAIWQEM 687



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 19/181 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 19  EPEPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWVPGMDHAGIATQAKV 78

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+ +   +     + +S D      T +   + 
Sbjct: 79  EQRLRQDGVTRYDLGREKFVEQVWQWKDEYAAVIKQQWGKMGLSLDFERERFTLDDGLNK 138

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEE 163
               ++  +  KG IY+G Y   +  +     +D EV    D G +Y+ ++  V   +  
Sbjct: 139 AVNKVFVDLYKKGLIYRGEYIINWDPQARTALSDIEVIYHDDEGAFYHVKYPFVNPNDTY 198

Query: 164 G 164
            
Sbjct: 199 N 199


>gi|154249040|ref|YP_001409865.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769323|sp|A7HJX5|SYV_FERNB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|154152976|gb|ABS60208.1| valyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 867

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 148/376 (39%), Gaps = 44/376 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   V+    + +F  +     + +   E+     +P  R  +V       ++D  
Sbjct: 341 RCYRCDTVVEPRLMDQWFVSMKPLAKRAIEAVENGEVTFIPD-RWKKVYLNWMYEIRDWC 399

Query: 209 LSRKTFDWGIKI----PDDPQY------------------------IMYVWIDALTNYLT 240
           +SR+   WG +I      D  +                        ++  W  +     +
Sbjct: 400 ISRQ-LWWGHRIPVWQCQDCGHYNVSENEPVKCEKCGSTNLKQDEDVLDTWFSSALWPFS 458

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +       +++P D+ V G DI+ F    +    +      P  K+V+ H  +  
Sbjct: 459 TMGWPEKTP-DLERYYPTDVLVTGFDIIFFWVARMIMMGYEFMDEKPF-KEVYIHQLVRD 516

Query: 299 K-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           K G K+SKSLGN IDP+EVI+E G D +R+ L    A G+D   D            AN 
Sbjct: 517 KYGRKMSKSLGNGIDPLEVIDEYGADPMRFTLAILAAQGRDLKLDVRFFD--TYKKFANK 574

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N  +R V M L+D++ +         SD+ ILS   + +Q+I E + +   + A  ++
Sbjct: 575 IWN-ATRFVLMNLEDFEKVDIKLSKLKLSDKWILSRLQKTIQKISEALDSYDFNIAANEI 633

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +   +   D Y +A K     +   +    V  V V V+     LL  F+P L  +++ 
Sbjct: 634 YNFFWDELCDWYIEAVK----NRLKTEERKVVQNVLVYVLDMSLRLLHPFMPFLTEELWT 689

Query: 476 ILFVADENRCFQSLDQ 491
            L  + E+       +
Sbjct: 690 KLPTSGESIVVAQWPE 705



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 18/160 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  I         + H+GHA  + I D+L+R+ R+ G DVL+  G D  G     A + 
Sbjct: 33  PKYSIVIPPPNITGKIHMGHALNITIQDILSRYKRMKGFDVLWLPGEDHAGIATQTAVER 92

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
              T                   + ++  +  ++    +  S D      T ++      
Sbjct: 93  YLSTQGKSRRDFSRDEFLNIVWNWANKYRQEIKNQIMSIGASVDWTRERFTLDEGLSKAV 152

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           R ++  +  KG IYKG Y   +  R     +D+EV    +
Sbjct: 153 RKVFVDMYKKGLIYKGKYIVNWCHRCGTVLSDEEVDYHEE 192


>gi|312135290|ref|YP_004002628.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775341|gb|ADQ04828.1| valyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 874

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/385 (21%), Positives = 151/385 (39%), Gaps = 39/385 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E     +  +       ++ +  + +F ++    +  +   +      +P  R  ++  
Sbjct: 331 KEEDYTHNVGHCYRCSTVIEPLVSKQWFVKMKPLAEPAIRVVKEGKIKFIPE-RFEKIYF 389

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYV 230
                +KD  +SR+   WG +IP                               +  +  
Sbjct: 390 NWMENIKDWCISRQ-LWWGHRIPAYYCRDCENMMVSREEVKICSKCGSSNVYQDEDTLDT 448

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+    +  +  F+P D+ V   DI+ F    + +         P   
Sbjct: 449 WFSSALWPFSTLGWPKETEDLR-YFYPTDVLVTAYDIIFFWVARMIFSGLEHMGKEPFKY 507

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+EVIE+ G DALR+ LV  I+ G D  +  + ++ 
Sbjct: 508 VLIHGIVRDAQGRKMSKSLGNGIDPLEVIEKYGADALRFTLVTGISPGNDTRFHMEKVEA 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             N + AN I N  +R V M L       P    FT ++  ILS    ++ E+ EN++  
Sbjct: 568 --NRNFANKIWN-AARFVLMNLDIDTSFKPDESKFTFTERWILSRLDTLISEVTENLEKF 624

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            I  A  ++   + +   D Y +  KP  L          V YV + V+  +  LL  F+
Sbjct: 625 EIGIAAQKLYDFIWDEFCDWYIEMSKP-TLYNKEASNNKEVQYVLLTVLTDILKLLHPFM 683

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L   +E+    +  +
Sbjct: 684 PFVTEEIYLNLPHVEESLVIATWPK 708



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA    I D+L RF R+ G   L+  GTD          
Sbjct: 31  SKKPFTIVIPPPNITGQLHMGHALNNTIQDILIRFKRMQGYCALWLPGTDHASIATEAKI 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +         +    L  S  +D    T ++   +
Sbjct: 91  VEKMKEEGLTKEMIGREKFLERAWEWKRVYGGRIIEQLKKLGASCDWDRERFTMDEGLSN 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ +KG IYKG     +        +D EV  
Sbjct: 151 AVKEVFVRLYEKGLIYKGERMINWCPTCHTTISDAEVEY 189


>gi|160944580|ref|ZP_02091808.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444362|gb|EDP21366.1| hypothetical protein FAEPRAM212_02094 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103338|emb|CBL00882.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 901

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/394 (21%), Positives = 155/394 (39%), Gaps = 40/394 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +  + E  K   G  Y   H+ ++ M  + +F ++       +   E      +P 
Sbjct: 351 KEGGFLKEIEPLKHEVGTCYR-CHSTIEPMISKQWFVKMEPLAKPAIESVEKGEIKFVPE 409

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGI-----------------------------KIP 221
            R  +         +D  +SR+   WG                              K+ 
Sbjct: 410 -RFTKNYMNWMKNTRDWCISRQ-LWWGHQIPAWYCDDCGETVVAKSAPCTCPKCGSAKLT 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP   +  W  +     +T G+ +        F+P +  V G DI+ F    + +    
Sbjct: 468 RDPD-TLDTWFSSALWPFSTLGWPNEDSADLKYFYPTNTLVTGYDIIGFWVSRMIFSGLA 526

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P             +G K+SKSLGN IDP+EVI + G DALR+ LV     G D 
Sbjct: 527 YTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIAQYGADALRFMLVDGSTPGNDM 586

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            Y +  ++   N   AN + N     +  + +D++  +P       SD+ +L+  ++V  
Sbjct: 587 RYIEKKVEAARN--FANKLWNATRFVLMNLPEDFEPGLPCEELLDMSDKWVLTKLNQVAG 644

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            + +N+++  +  A A++ S + +   D + +  KP  L   +  +A T   V V V+ +
Sbjct: 645 AMTDNLEHYEMGLAAAKINSFIWDVYCDWFIEIAKP-RLNSGDAQQADTARRVLVYVLDK 703

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              LL  F+P +  +++  L  + E    Q+   
Sbjct: 704 ALKLLHPFMPFITEELYQALPGSAETIMTQAWPT 737



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R  R+ G   L+  GTD          
Sbjct: 34  DKKPYTIVMPPPNVTGQLHMGHAVDNTMQDILIRTKRMQGYAALWVPGTDHASIATEAKV 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      +  +           L  S D      T ++   +
Sbjct: 94  VEAMRAEGLTKEMVGRDGFLERAWAWKTKYGNRIVSQLKKLGSSCDWERERFTMDEGCSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ DKG IY+G     +        +D EV        +     PV
Sbjct: 154 AVKEVFVRLYDKGLIYRGNRMVNWCPHCNTSISDAEVEYEEKDGSFWHLLYPV 206


>gi|258645848|ref|ZP_05733317.1| valine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403221|gb|EEW96768.1| valine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 883

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 90/416 (21%), Positives = 160/416 (38%), Gaps = 42/416 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+          D   +   E  + A G   +  H  V+ +  + +F ++    
Sbjct: 312 YNGMDRYECRKEIIKDFTDMGLFVKSEEKEHAVGH-CSRCHTVVEPLTTKQWFVKMKPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   +S     +P    +  I +++  + D  +SR+ +                   
Sbjct: 371 GPAMEAVQSGKTKFVPERFSSTYIQWLE-NIHDWCISRQLWWGHRIPVWYCDDCGEVIAS 429

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G K       ++  W  +     +T G+ D       +++P    V G D
Sbjct: 430 RTDLEACPKCGSKHIRQDPDVLDTWFSSALWPFSTMGWPDRTPVLN-QWYPTSTMVTGYD 488

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + + +      +P             +G K+SKSLGN IDP+EVIE+ G DA
Sbjct: 489 IIFFWVARMMFMSMEFMKEIPFRYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGADA 548

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAF 383
           LR+ LV     G D  +  + ++   N + AN + N  S+   M L DYD   IP    +
Sbjct: 549 LRFTLVTGNTPGNDMRFYYERVEG--NRNFANKLWN-ASKFTLMNLDDYDPRFIPEESQY 605

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T +D+ IL   ++  + + EN+    +  A   +         D Y +  K       N 
Sbjct: 606 TLADKWILEGLAQTEEHVSENLDKYELGAAADSIYDFAWNSFCDWYIETAKGRLYGAHNA 665

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQRLK 494
           DR     YV V V+ ++  LL  F+P +   ++  L  + E      + + D+RL+
Sbjct: 666 DR-QVTQYVLVYVLTRIMALLHPFMPFITEHLWQHLHHSGETLARAPWPAADERLR 720



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I         Q H+GHA +  + D+L R+ R+ G +VL+  G D  G      
Sbjct: 35  EGKEPYSIVLPPPNVTGQLHMGHALDNTLQDILIRYKRMQGYNVLWLPGKDHAGIATQVK 94

Query: 62  AQ-------------------NAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  + +   +  R +    D S + F  T +  
Sbjct: 95  VEKQIAEEGLTKYDLGREKFLERVWEWKEKYGNTIGKQIRRLGSSCDWSRERF--TMDDV 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R ++  + +KG IY+G     +  R +   +D EV    D  +      P+   E
Sbjct: 153 CARAVREVFVSLYEKGLIYQGFRITNWCPRCQTALSDIEVEHENDMGHLWYFDYPLADEE 212


>gi|167770372|ref|ZP_02442425.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
 gi|167667694|gb|EDS11824.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
          Length = 879

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 149/395 (37%), Gaps = 44/395 (11%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            D  +    E YK   G  Y    + ++    + +F ++       +    S     +P 
Sbjct: 335 EDGGFLKAVEPYKHNVGSCYR-CGSVIEPRVSKQWFVKMEPLAKPAVEAVRSGRTRFIPE 393

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------- 221
            R +++       +KD  +SR+   WG +IP                             
Sbjct: 394 -RFDKIYFNWMENIKDWCISRQ-LWWGHRIPAWYCTGCGEMIVSRETPQTCPKCGSHRLE 451

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP   +  W  +     +T G+ D+       F+P D  V G DI+ F    + +    
Sbjct: 452 QDPD-TLDTWFSSALWPFSTLGWPDDTP-ELRYFYPTDTLVTGYDIIFFWVARMIFSGLA 509

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                P    +        +G K+SKSLGN IDP+E+I+  G DALR+ L    + G D 
Sbjct: 510 HMDEAPFKTVLIHGLVRDAQGRKMSKSLGNGIDPLEIIDRYGADALRFTLATGNSPGNDM 569

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  + +    N   AN I N  SR + M L D D     P      D+ +LS    +++
Sbjct: 570 RFSDEKVNASRN--FANKIWN-ASRFILMNLSD-DVEPGLPETLNIEDKWVLSKYRTLVR 625

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+ +N++   +  A+ ++   + +   D Y +  K           A+    V V V+  
Sbjct: 626 EVTDNLEKFELGLAVQKLYDFIWDILCDWYIELCKSRLQAGGETSEAA--QRVLVYVMTG 683

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
              LL  F+P +  +I+  L    E+    +  Q 
Sbjct: 684 TLKLLHPFMPFITEEIWQALPHDGESIMVATWPQA 718



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         + H+GHA +  + D+L R+ R+ G + L+  GTD          
Sbjct: 42  DKKPYTIVIPPPNITGRLHMGHALDETLQDILIRWRRMQGYEALWLPGTDHASIATEAKI 101

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      +  +   +  D    L  S D      T ++    
Sbjct: 102 VEAMRQEGVTKEQLGREGFLERAWAWKREYGGHILDQLKKLGSSCDWQRERFTLDEGCSR 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ +  ++G IY+G     +     +  +D EV       ++   + P+
Sbjct: 162 AVREVFVRFFEQGLIYRGERIVNWCPHCLSTISDIEVEYEEKDGFFWHINYPI 214


>gi|282883323|ref|ZP_06291917.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281296827|gb|EFA89329.1| valine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 879

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 147/380 (38%), Gaps = 40/380 (10%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
             +++ +Y   + +  A G   +  ++ ++ +  + +F ++       L  Y +    I+
Sbjct: 326 DFKEKGFYIGKKKHHNAVGH-CSRCNSVIEPLISKQWFVKMEPLAKPALEAYRNGELNIV 384

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQY-------------------- 226
           P +R  ++       ++D ++SR+   WG    +  D                       
Sbjct: 385 P-QRFGKIYENWLLNIRDWNISRQ-LWWGHRLPVWYDQDGNYIVSLEDPNGKEEYNKKTF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                 +  W  +     +T G+    +     F+P D+ V G DI+ F    + + +  
Sbjct: 443 TQDEDTLDTWFSSALWPFSTLGWPQKTE-DLDYFFPTDVLVTGYDIIFFWVIRMVFSSLE 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               LP    + +       G K+SKSLGN IDP++VI+E G DALR+ LV     G D 
Sbjct: 502 QMGQLPFKDVLLNGLVRDELGRKMSKSLGNGIDPLDVIDEYGADALRFTLVTGNTPGNDM 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +    ++   N   AN + N     +  +  D            + D+ I+S   + ++
Sbjct: 562 RFYIKRVESSRN--FANKLWNATRFIMMNLSDDISDSNFLIDELQDQDKWIISKLEKTIK 619

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            I E +    I  A A +   +     D Y +  KP  L      + +    V + V+  
Sbjct: 620 SITEKIDKYEIGLAAADIYDFIWSDFCDWYIEMVKP-VLYSEG--QKTNTQKVLLFVLEN 676

Query: 458 LAILLQAFVPKLANKIFDIL 477
           +  LL  F+P +  +I+  L
Sbjct: 677 ILKLLHPFMPFITEEIWQTL 696



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I           H+GHA    I D+L R  R+ G   L+  GTD         
Sbjct: 33  KDKKPYSIVMPPPNVTGNLHMGHALNGTIQDILIRAKRMQGYSALWLPGTDHASISTEAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                 +                   +  +   N +     L  S D      T ++   
Sbjct: 93  VVAKIRSEGKEKEDLGREKFLDEAWAWTHEYGGNIKKQFRKLGASCDWTRERFTLDETLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++ ++ +KG IY+G     +    +   +D EV              P +
Sbjct: 153 KAVGQVFVELYNKGLIYRGSRIINWCPSCKTSISDAEVDHIEHDGEIWYFTYPFE 207


>gi|259047289|ref|ZP_05737690.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036065|gb|EEW37320.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 880

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/381 (19%), Positives = 136/381 (35%), Gaps = 16/381 (4%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +   G   +        L  + +     + + A         N V +        
Sbjct: 335 KIEKHLHSVGHSERTDVVVEPRLSKQWFVKMGPLAQQAINAQRAEGDNTVNFYPPRFNDA 394

Query: 168 RLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
            L   ++           +        ++    V  G++  S S            DP  
Sbjct: 395 YLRWMENIHDWVISRQLWWGHQIPAWYHKETGEVFVGMEAPSDSENW-------TQDPD- 446

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +     +T G+ D       +++P +  V G DIL F    + +     +   
Sbjct: 447 VLDTWFSSALWPFSTMGWPDEDAADYKRYYPTNTLVTGYDILTFWVSRMMFQGLEFTGKR 506

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +        +G K+SKSLGN +DP+EVIE+ G DALR+FL    A G+D  Y  D
Sbjct: 507 PFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIEQYGADALRWFLANGSAPGQDVRYSTD 566

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +    N    N I N    ++  +       +   G  T +D+ IL+  ++ + ++ E 
Sbjct: 567 KMDAAWN--FINKIWNASRYALMNVGDLTADQVDITGEKTLADKWILTRLNQTIGKVTEL 624

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +      A   +   + +   D Y +  K   L   +     T   + V V+     LL
Sbjct: 625 FEKFEFGEAGRLLYRFIWDDFCDWYIEMSK-ETLAGDDEAAKLTTRSILVYVLDNTLRLL 683

Query: 463 QAFVPKLANKIFDILFVADEN 483
              +P +  +I+  +    E+
Sbjct: 684 HPIMPFVTEEIWQSVPHVGES 704



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + H+GHA+++ + D++ R  R+ G D L+  G D  G       + 
Sbjct: 37  EPYSIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEE 96

Query: 65  AGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                               T  + ++ + + R+    + IS D      T +    D  
Sbjct: 97  KLRGEGLSRYDLGREKFLEQTWKWKEEYASHIREQWAKMGISVDYRRERFTLDNGLSDAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + ++  + +KG IY+G Y   +  + +   +D EV  
Sbjct: 157 KKVFVTLYEKGLIYRGEYIINWDPKAKTSLSDIEVIH 193


>gi|294670986|ref|ZP_06735842.1| hypothetical protein NEIELOOT_02692 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307473|gb|EFE48716.1| hypothetical protein NEIELOOT_02692 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 463

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ AD   
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++V +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EKGLNPEWMRYYIVAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +           ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKDVSGS-----ALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K     +R   V    +     L   L   +P+ A      L +  +   + +  + L
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWANTRETL 305

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 306 --GEHAINKYEHLMQR 319


>gi|314933819|ref|ZP_07841184.1| valine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653969|gb|EFS17726.1| valine--tRNA ligase [Staphylococcus caprae C87]
          Length = 876

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 145/407 (35%), Gaps = 35/407 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++        L+D+      E +  + G         V+      +F ++    
Sbjct: 309 YEGMDRFECRKQLVQDLKDQDLVIKIEEHTHSVGHSERTGA-IVEPYLSTQWFVKMKPLA 367

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
            + L   ++         R     +     ++D ++SR+   WG +I             
Sbjct: 368 QRALDNQKTDDRIDFFPGRFENTFNRWMEEIRDWTISRQ-LWWGHQIPAWYHKETGEIYV 426

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +    ++  W  +     +T G+ D       +++P +  V G DI+ F
Sbjct: 427 GEEAPSDIDNWEQDADVLDTWFSSALWPFSTLGWPDTESEDFKRYYPTNALVTGYDIIFF 486

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + +     +   P    +         G K+SKSLGN +DP++VI+E G D+LRYF
Sbjct: 487 WVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYF 546

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
           L    + G D  Y  + ++   N    N I N    S+  I +++        G  + +D
Sbjct: 547 LATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGEEFKVEDIDLSGNLSLAD 604

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRA 444
           + IL+  +  ++ + +             + + + +   D Y +  K P  +   +  + 
Sbjct: 605 KWILTRLNETIKTVTDLSDKYEFGEVGRALYNFIWDEFCDWYIEMSKIP--MNGDDEAQK 662

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                V   V+ ++  +L  F+P +   I+  L    E         
Sbjct: 663 QNTRSVLSYVLDKIMKMLHPFMPFVTETIWQSLPHEGETIVNADWPT 709



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKDTYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +     + +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGISRHELGREKFLEQAWDWKEEYASFIRQQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + +K  IY+G     +  +     +D EV  
Sbjct: 150 LSKAVRKVFVDLYNKDIIYRGERIINWDPQARTALSDIEVIH 191


>gi|153812839|ref|ZP_01965507.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174]
 gi|149831051|gb|EDM86140.1| hypothetical protein RUMOBE_03246 [Ruminococcus obeum ATCC 29174]
          Length = 895

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 148/383 (38%), Gaps = 40/383 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M +  +F R+       +          +P       + ++
Sbjct: 349 VPHNHSVGTHDRCGTTVEPMIKPQWFVRMDEMAKAAMESLRPGELEFVPASFGKTYLHWL 408

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           +  ++D  +SR+ +                             G       +  +  W  
Sbjct: 409 E-NIRDWCISRQLWWGHRIPAYYCDECGEVVVAREMPEKCPKCGCTHFHQDEDTLDTWFS 467

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D        F+P D+ V G DI+ F    + + A   +  +P    + 
Sbjct: 468 SALWPFSTLGWPDKTP-ELEYFYPTDVLVTGYDIIFFWVIRMVFSALEQTGEVPFHHVLI 526

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 527 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN 586

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLI 410
              AN I N  SR + M L+      P         D+ ILS  + V++E+ +NM    +
Sbjct: 587 --FANKIWN-ASRFIMMNLEGKTVTEPADLNELCLEDKWILSKLNTVIREVTDNMDKYEL 643

Query: 411 HRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             A+ +V   + +   D Y +  K   W+  + +P  A+  L+     + +   LL  ++
Sbjct: 644 GIAVQKVYDFLWDELCDWYIEMAKVRLWK-AEEDPKAANNALWTLRTALTEGLKLLHPYM 702

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +  +I+  L   +E+      
Sbjct: 703 PFITEEIYCTLLPEEESIMISDW 725



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           +++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD          
Sbjct: 46  DKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTDHAAIATEVKV 105

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  ++    T ++    
Sbjct: 106 IDKLKKEGIDKLDIGREEFLKHAWAWKEEYGGKIINQLKKLGASADWERERFTMDEGCSK 165

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             + ++ ++ +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 166 AVQEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPIVGEE 222


>gi|255065400|ref|ZP_05317255.1| methionine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255050225|gb|EET45689.1| methionine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 462

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ AD   
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +           ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKDVSGS-----ALLAKLAAESSAIAEQYENREYARALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K     +R   V    +     L   L   +P+ A      L +  +   + +  + L
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWANTRETL 305

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 306 --GEHAINKYEHLMQR 319


>gi|148543739|ref|YP_001271109.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153145|ref|YP_001841486.1| valyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363281|ref|ZP_03847413.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682111|ref|ZP_08161629.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530773|gb|ABQ82772.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224489|dbj|BAG25006.1| valyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071737|gb|EEI10028.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978755|gb|EGC15704.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 884

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 134/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   ++        ER     +     + D  +SR+   W
Sbjct: 359 VEARLSTQWFVKMKPLAEAALKNQDTDDRVNFVPERFEHTFTQWMENIHDWVISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ +       
Sbjct: 418 GHRIPAWYNKQTGEVYVGMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 478 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGRAPFKNVLLHGLIRDEQGRKMSKSLGNGI 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ GVDALR+FL+     G+D  +    +    N    N I N     +  + +
Sbjct: 538 DPMDVIKKYGVDALRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWNASRYVIMNLGE 595

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
               ++P    +  +D  ILS  +  ++++ E         A   + + +     D Y +
Sbjct: 596 MPAPVLPDKSKWDLADRWILSRLNATVKQVNEQFDKFEFGEAGRALYNFIWNDFCDWYIE 655

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K  +L     +  +    +   V+ Q   +L   +P +  K++  +    E+
Sbjct: 656 MTK-EKLNNGTDEEKNNTKNILGYVLDQTLKMLHPIMPFVTEKLWQSMPHDGES 708



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 35  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 95  VEARLRKQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 155 KAVRKVFVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDD 197


>gi|288575952|ref|ZP_06394074.1| methionine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566634|gb|EFC88194.1| methionine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 462

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 19/316 (6%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ AD   
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRTPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKHFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +           ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKDVSGS-----ALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L K     +R   V    +     L   L   +P+ A      L +  +   + +  + L
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNL--DAITWANTRETL 305

Query: 494 KPGFMLHKTFDPIFPR 509
             G      ++ +  R
Sbjct: 306 --GEHAINKYEHLMQR 319


>gi|240273433|gb|EER36953.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 541

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/494 (18%), Positives = 185/494 (37%), Gaps = 56/494 (11%)

Query: 46  LFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
              +GTDE+G            T +   D+      ++    DI +D F RTT     D 
Sbjct: 26  HTLSGTDEYGTTTEAKGLIEKCTPQELCDKYHAIHAEIYQRFDIGFDIFGRTTTPLQTDI 85

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
            + +++K+ + G + +   +          Y ++  Y  A G   +     ++ ++ +  
Sbjct: 86  TQDIFRKLYNNGFLKERMTTQ--------LYCEEHHYADARGDQCDMCGQLLEPLQLKNP 137

Query: 166 FFRLSAYQDKLL------------------SYYESHPEFILPIERRNEVISFVKSGLKDL 207
             ++  +                        + ++      P   ++  ++++K GL+  
Sbjct: 138 RCKIDGFAPITKDTKHIFLELDKLQPEVEDYFQKASTNGAWPNNGKSITLAWLKEGLQPR 197

Query: 208 SLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HV 262
           S++R    WG  +  P     ++Y W DA   Y++ T         K    P D+     
Sbjct: 198 SITRD-MKWGTQVPFPGYEDKVIYSWFDACIGYVSITA-KYTDQWEKWWRNPEDVQLYQF 255

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
           IGKD + FH++ +PA  +    P  K   + +  ++ ++G K SKS G  +      +  
Sbjct: 256 IGKDNVVFHSVIFPASQIGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQQTG 315

Query: 321 G-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIP 378
           G  D  RY+L+       D  +  D      N+ L N +GN  SR +  +   + + ++P
Sbjct: 316 GSADVWRYYLLSRRPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRFYNNIVP 375

Query: 379 TPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-EL 436
               + E S E+     +R+L +  E +    +   LA  + +  + + +    K   +L
Sbjct: 376 NWTRYHEPSFETWKEEINRLLTKYVEVLNTVKLRAGLATALHISQQGNLFLQTNKLNDKL 435

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            ++ P + + V+ +T           +         I   L V             +KP 
Sbjct: 436 HESEPAKCTAVISLT-----------KPL-----KSICTQLRVEPLAIPDHWSADSIKPS 479

Query: 497 FMLHKTFDPIFPRF 510
             + K+ + +F R 
Sbjct: 480 HEIGKS-EHLFRRI 492


>gi|268609037|ref|ZP_06142764.1| valyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 872

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/396 (20%), Positives = 150/396 (37%), Gaps = 40/396 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  E    + E Y    G  Y      V+      +F ++    
Sbjct: 311 YAGMDRYEARKKIVEDLEKEGALVEIEDYSHNVGTCYRCGTT-VEPKVSTQWFVKMKPLA 369

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   ++     +P  R +++       ++D  +SR+ +                   
Sbjct: 370 QPAIDAVKNGDTKFVPE-RFDKIYFHWLDNIRDWCISRQIWWGHQIPAFYCDECGEMTVT 428

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G  +  DP   +  W  +     +T G+ +N +  K  F+P +  V G D
Sbjct: 429 KESSCNCPKCGKPMRQDPD-TLDTWFSSALWPFSTLGWPENTEDLK-YFYPTNTLVTGYD 486

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + +        +P    +        +G K+SKSLGN IDP+EVI E G DA
Sbjct: 487 IIFFWVIRMMFSGLENMGKVPFDTVLIHGLVRDAQGRKMSKSLGNGIDPLEVINEYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L    + G D  Y  D +K   N   AN + N     +  + +D++     P    
Sbjct: 547 LRFMLATGNSPGNDMRYIDDKVKAARN--FANKLWNASRFIMMNLPEDFEFKG-LPSDLE 603

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D+ +++  +++ +E+ EN+    +  A  ++   + +   D Y +  KP        +
Sbjct: 604 LEDKWLVNKFNQLAKEVNENLDKYELGVASQKIYDFIWDVYCDWYIELTKPRIQAGG--E 661

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +    V V  ++ +  LL  F+P +  +I+ +L 
Sbjct: 662 TMAKAQAVLVWAMQGMLKLLHPFMPFITEEIWQVLN 697



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 22/170 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD          
Sbjct: 35  KKTPYTIVIPPPNITGQLHMGHALDETLQDILIRWKRMSGYSALWLPGTDHAAIATEAKI 94

Query: 63  QNAGV--------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
             A                        K +  +     + +    D S + F  T ++  
Sbjct: 95  VEAMRKEGVTKEDLGREGFMKRAWEWKKQYGGRIVEQLKKLGSSCDWSRERF--TMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
               + ++ K  +KG IY+G     +  + +   +D EV       ++  
Sbjct: 153 SKAVKEVFVKYYEKGLIYRGERIINWCPKCKTSLSDAEVTYEDQAGHFWH 202


>gi|51891504|ref|YP_074195.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826240|sp|Q67SJ2|SYV_SYMTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51855193|dbj|BAD39351.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 911

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/434 (20%), Positives = 160/434 (36%), Gaps = 51/434 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+           E +    E ++ A G         ++ +    ++ ++    
Sbjct: 319 YAGLDRYECRRRIVADAEAEGWLVKVEEHQHAVG-CCARCGTVIEPLISRQWYVKMKPLA 377

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYI-- 227
           +  +   ES    I+P  R  +V       ++D  +SR+   WG +I     DD  ++  
Sbjct: 378 EPAIRAVESGQIKIVPE-RFTKVYLHWMENIQDWCISRQ-IWWGHRIPVWYCDDCGHLTV 435

Query: 228 ----------------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                 +  W  +     +T G+ D+    +  F+P D+ V G 
Sbjct: 436 SETDPTRCEKCGSANIRQDEDALDTWFSSALWPFSTLGWPDDTADLR-YFFPTDVLVTGY 494

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DIL F    + + +  L+  +P    V        +G K+SKSLGN +DPI+VI++ G D
Sbjct: 495 DILFFWVARMIFSSLELTGKIPFHTVVLHGLVRDAQGRKMSKSLGNGVDPIDVIDQYGTD 554

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA- 382
           ALR+ LV   + G D  +  + ++   N   AN + N  SR V M L   D      GA 
Sbjct: 555 ALRFMLVTGSSPGNDIRFHTERVENARN--FANKLWN-ASRFVLMNLA--DWQPAAEGAA 609

Query: 383 --FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             +  +D  I    +   + + E +       A   +   +     D Y +  KP     
Sbjct: 610 LQYDVADRWIRHRFNEAARAVNELLGEYQYGEAARTIYDFIWSEFCDWYIELVKPRLYNP 669

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLD-----QR 492
            +P RA+        V+     LL  F+P +   I+  L + + +      +        
Sbjct: 670 ADPTRAAA-QETLARVLEGTLRLLHPFMPYITEAIWQKLPLRSPQVETAPEIARAAGRDA 728

Query: 493 LKPGFMLHKTFDPI 506
           L P   +     P+
Sbjct: 729 LPPSISVTAYPTPV 742



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 58/176 (32%), Gaps = 19/176 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++   I           H+GHA    + D+L R+ R+ G   L+  GTD  G     
Sbjct: 40  VEGKQPYTIVIPPPNVTGTLHLGHALNNTMIDILIRWKRMQGHPTLYLPGTDHAGLATQI 99

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         + ++           L +S D      T ++R
Sbjct: 100 RVEEDLRKSGGPTRHELGREAFVAKVWDWKERYHATITSQLRKLGVSVDWSREAFTMDER 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R  + ++  KG IY+G     +  +D+   +D EV       +      P+
Sbjct: 160 LSRAVRAFFVQLYKKGLIYQGTRITHWCPKDQTALSDIEVEYEERQGHMWHFRYPL 215


>gi|804996|emb|CAA89153.1| orf [Homo sapiens]
          Length = 478

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 155/375 (41%), Gaps = 18/375 (4%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH-PEFILPIERRNEVISFVKSGLKDLS 208
                +       +  F  L   + +L  +     P        +    S+++ GLK   
Sbjct: 13  CKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRC 72

Query: 209 LSRKTFDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVI 263
           ++R    WG  +P +     + YVW DA   YL+ T    +      K  P  +     +
Sbjct: 73  ITRD-LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN-PEQVDLYQFM 130

Query: 264 GKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-V 320
            KD + FH++ +P   L A  N  L   + +  ++ ++  K SKS G  +      +  +
Sbjct: 131 AKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGI 190

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
             D  R++L+     G+D  +    L  + N++L N +GN ++R+   + K + G +P  
Sbjct: 191 PADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVP-E 249

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT- 439
              T  D+ +L   +  LQ   + ++   I  AL  ++++    ++Y    +PW+  K  
Sbjct: 250 MVLTPDDQRLLGHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGS 309

Query: 440 --NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKP 495
             +  RA TV  + V +   L+++LQ ++P ++  I   L +     +    +    L  
Sbjct: 310 EADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCTLPA 369

Query: 496 GFMLHKTFDPIFPRF 510
           G  +  T  P+F + 
Sbjct: 370 GHQIG-TVSPLFQKL 383


>gi|150021444|ref|YP_001306798.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793965|gb|ABR31413.1| valyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 866

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 107/499 (21%), Positives = 182/499 (36%), Gaps = 72/499 (14%)

Query: 36  RFHRLDGLDVLFT-------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  + G +V+            D H            VT     +      R   + ++
Sbjct: 238 RYKDVVGKEVILPLVGRKIKIIADIHADP-KFGTGALKVTPAHDPNDYLIGQRHNLEFIN 296

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           I  DD   T  +                 D Y+        L  E +    E  K + G 
Sbjct: 297 IFNDDM--TINENGGK---------YKGLDRYEAREKIVEDLEKEGFLVKIENLKHSVGH 345

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
            Y      ++ M    +F ++     K +   E+      P +R  +V       ++D  
Sbjct: 346 CYR-CDTVIEPMLMNQWFVKMEPLAKKAIDAVENEHIKFYP-QRWKKVYLNWMYNIRDWC 403

Query: 209 LSRKTFDWGIKI----PDDPQY------------------------IMYVWIDALTNYLT 240
           +SR+   WG +I      D  +                        ++  W  +     +
Sbjct: 404 ISRQ-LWWGHRIPIWYCQDCGHINVSEDKVTKCEKCGSTNLRQEEDVLDTWFSSALWPFS 462

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295
           T G+ +     K +F+P D+ V G DI+ F    W A ++        +     V+ H  
Sbjct: 463 TLGWPNETKDLK-EFYPTDVLVTGFDIIFF----WVARMIMMGYEFMDEKPFSDVYIHQL 517

Query: 296 ILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           +  K G K+SKSLGN IDPIEVIEE G D +R+ L    A G+D   D   ++       
Sbjct: 518 VRDKFGRKMSKSLGNGIDPIEVIEEYGADPMRFSLSTLAAQGRDIKLDLKHIETS--KKF 575

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN I N  +R V + L+D+            SD+ ILS   + ++ +   ++N   + A 
Sbjct: 576 ANKIWN-ATRFVILNLEDFQKQ--DLDNLNLSDKWILSRLQKTIKNVTHAIENYEFNVAA 632

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++ +   +   D Y +  KP    KTN      V  V V V+     LL   +P +  +
Sbjct: 633 KEIYNFFWDELCDWYIEISKPRL--KTNERSL--VQNVLVYVLDNSLKLLHPIMPFITEE 688

Query: 473 IFDILFVADENRCFQSLDQ 491
           ++  L  + E+    +  +
Sbjct: 689 LWQKLPTSGESITISNWPK 707



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  I         + H+GHA  + + D+L R+ R++G   L+  G D  G     A 
Sbjct: 35  SRPKYSIVIPPPNITGKIHMGHALNITLQDILTRYKRMNGFKTLWLPGEDHAGIATQTAV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        +     +  +     +  S D      T ++    
Sbjct: 95  EKKIEKEGKKREDLGRKKFLEIVWDWASTYRKTIKQQIMAIGASVDWSRERFTLDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             + ++  +  KG IYKG Y   +  R +   +D+EV   
Sbjct: 155 AVKKVFVSLYKKGLIYKGKYIVNWCPRCKTVLSDEEVEYH 194


>gi|326692181|ref|ZP_08229186.1| valyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 894

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 131/333 (39%), Gaps = 17/333 (5%)

Query: 152 AQHNPVQWMEEEGYFFRLS---AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
            Q NP + +E     F  +     ++           +   I    +     +  +   +
Sbjct: 386 MQQNPDEKVEFVPARFEDTFTRWMENIRDWVISRQLWWGHQIPAWYKHKGTDQEEIYVGT 445

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            + +   W      DP  ++  W  +     +T G+ ++  G  A+++P +  V G DI+
Sbjct: 446 EAPEGEGW----ERDPD-VLDTWFSSALWPFSTMGWPEDTTGDYARYYPTNTLVTGYDII 500

Query: 269 RFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            F    + +     +   P    +        +G K+SKSLGN +DP++VIE+ G DALR
Sbjct: 501 FFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALR 560

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +FL      G+D  +  D +    N    N I N     +  + +D    +P     T +
Sbjct: 561 WFLATGSTPGQDVRFTYDKMDAAWN--FINKIWNASRYVIMNLSEDTPSTLPDLDKLTLA 618

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D+ ILS  +  ++ +  N        A  ++ + +     D Y +  K  E    + D+A
Sbjct: 619 DQWILSRLNTTVENVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDGDKA 676

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V      V+ Q   LLQ  +P +   I+  +
Sbjct: 677 -PVQQTLAYVLDQTLRLLQPIMPFVTEAIWQEM 708



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E   I         + H+GHA++  + D++ R  ++ G+DVL+  G D  G      
Sbjct: 40  QEPEPYAIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAK 99

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + ++ +   +     + +S  +D    T ++  +
Sbjct: 100 VEQRLRGEGVSRYDLGREKFVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERFTLDEGLN 159

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 160 KAVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIEVIYQDD 202


>gi|226311411|ref|YP_002771305.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094359|dbj|BAH42801.1| valyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 890

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 82/369 (22%), Positives = 139/369 (37%), Gaps = 41/369 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D+ L+   S        ER           ++D  +SR+   W
Sbjct: 361 VEPYLSTQWFVKMQPLADEALANANSPESVKFVPERFKTNYLRWIENIRDWCISRQ-LWW 419

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                            +    ++  W  +     +T G+ +  
Sbjct: 420 GHRIPAWYCGDCNETIVSRADVTECPSCHSHKLEQDNDVLDTWFSSGLWPFSTLGWPEES 479

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +  K  F+P ++ V G DI+ F    + +     +   P    +        +G K+SKS
Sbjct: 480 EDMK-YFYPTNVLVTGYDIIFFWVARMMFSGLEFTGKSPFESVLIHGIIRDSEGRKMSKS 538

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP+EVIE+ G DALRY L    + G D  +  + ++   N + AN I N  SR  
Sbjct: 539 LGNGVDPMEVIEKYGADALRYTLATGNSPGNDQRFYWEKVEA--NRNFANKIWN-ASRFA 595

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L D+        G  +  D+ ILS     + ++           +   + + + +  
Sbjct: 596 LMNLTDFKYEEIDLSGELSTPDKWILSRLQATIADVTRLSDAFEFGESGRVLYNFIWDDL 655

Query: 424 VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            D Y +  K P  L  T+     T   V V V+ Q   LL  F+P +  +I+  L    E
Sbjct: 656 CDWYIEMAKLP--LYGTDEAAKKTTQSVLVTVLDQTLKLLHPFMPFITEEIWQALPHQGE 713

Query: 483 NRCFQSLDQ 491
           +        
Sbjct: 714 SITVAPWPT 722



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            +    I         + H+GHA +  + D++ R  R+ G   LF  G D  G       
Sbjct: 43  NKRPFTIVIPPPNVTGKLHLGHALDTTLQDIITRTKRMQGYSALFLPGMDHAGIATQARV 102

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        +    + + R+  + L ++ D      T ++    
Sbjct: 103 EATLREEGISRHDLGREKFVEKVWEWKHIYASHIREQWEKLGLALDYSRERFTMDEGLSQ 162

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +        +D EV  
Sbjct: 163 AVREVFVRLYEKGLIYRGNRIINWDPAARTALSDIEVIY 201


>gi|218133173|ref|ZP_03461977.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992046|gb|EEC58050.1| hypothetical protein BACPEC_01035 [Bacteroides pectinophilus ATCC
           43243]
          Length = 893

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 82/402 (20%), Positives = 154/402 (38%), Gaps = 30/402 (7%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            + + G   +   +    ++ + +   DE+ K A     N     +     E  +F  + 
Sbjct: 339 HVHNVGTHDRCKTTVEPMIKQQWFVKMDELIKPAADAVKNGDIK-LMPERMEKTYFNWTD 397

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
                    +      +P    ++    V S     + +      G  +  DP   +  W
Sbjct: 398 NIRDWCISRQLWWGHRIPAYYCDDCGEMVVSD----TETTVCPKCGGHMTQDPD-TLDTW 452

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
             +     +T G+ +  +   + F+P D+ V G DI+ F    + +  +      P  K 
Sbjct: 453 FSSALWPFSTLGWPEKTE-ELSYFYPTDVLVTGYDIIFFWVIRMIFSGYEHMGEKPFGKV 511

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F       +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++  
Sbjct: 512 LFHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVEAS 571

Query: 350 VNADLANGIGNLVSRSVSMI---------------LKDYDGMIPTPGAFTESDESILSVC 394
            N   AN + N  +R + M                          P   T +D+ ILS  
Sbjct: 572 RN--FANKVWN-ATRFIMMNDPEGRIKPGNIKVNGNGGSSSAYKLPENLTAADKWILSRM 628

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           ++V+ E+ ENM+   +  A++++   + +   D Y +  KP      +  + + V     
Sbjct: 629 NKVVAEVTENMEKYELGIAVSKLQDFIWDEFCDWYIEMVKPRLYNDEDTTKDAAVW-TLK 687

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            V+     +L  ++P +  +IF  L   +E+          K
Sbjct: 688 TVLVDALKMLHPYMPFVTEEIFCNLQDDEESIMISDWPAYKK 729



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 34  RSKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRFKRMQGYEALWIPGTDHASISTEVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             NA                   T  +  Q           +  S  +D    T ++   
Sbjct: 94  VINALKEEGIDKNELGREGFLKRTWEWKKQYGGTITSQLKKMGSSCDWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++  +  KG IYKG     +    +   +D EV       ++     P+
Sbjct: 154 KAVQTVFINLYKKGLIYKGSRIINWCPVCKTSISDAEVEYEEQAGHFWHIKYPI 207


>gi|153004343|ref|YP_001378668.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027916|gb|ABS25684.1| valyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 1052

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 136/362 (37%), Gaps = 40/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   ++ +  + ++ R+       +   E      +P +  N  +++++  + D  
Sbjct: 356 RCQRSQTVLEPLLSDQWYVRIEPLARPAIEAVEQGRTRFIPEQWTNTYMAWMR-NIHDWC 414

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I     P                           ++  W  +     +T
Sbjct: 415 ISRQ-LWWGHQIPAWYCPDGHVTVARETPSACRICASAELRQDEDVLDTWFSSALWPFST 473

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ ++ D  +  F+P  +   G DI+ F    +          +P             K
Sbjct: 474 MGWPEDTDTLRT-FYPTSVMETGHDIIFFWVARMMMMGIHFMGEVPFRTVYLHPMVRDEK 532

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SK+ GNVIDP+ + E+ G DALR+ L    A G+D    KD ++       AN + 
Sbjct: 533 GQKMSKTKGNVIDPLVITEQYGADALRFTLAALTAQGRDIKLAKDRIEG--YRAFANKLW 590

Query: 360 NLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  +R   M L+ +      PT  A T +D  IL+   R + +    ++    + A   V
Sbjct: 591 N-ATRFALMNLEGHVHQAVDPTKLAMTPADRWILARTQRAVNDTVTALEGLRFNEAANTV 649

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              V     D Y +  K   L   +  + +         ++   +LL  F+P +  +++ 
Sbjct: 650 YQFVWGELCDWYIELAK-EALYGDDAGKKAAAQATLTHALKTALLLLHPFMPFITEELWH 708

Query: 476 IL 477
           +L
Sbjct: 709 VL 710



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 53/161 (32%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    I           H+GHA    + DVL R+ R+ G + L+  GTD  G      
Sbjct: 39  RSRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAGIATQMI 98

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +     T                   + ++      +    L  S D      T ++R 
Sbjct: 99  VEKELRKTEKLSRHDLGREEFLKRVWAWKERYGSRIGEQHQALGASLDWERERFTMDERS 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++ ++G +Y+      +        +D EV  
Sbjct: 159 SRAVREVFVRLHEEGLVYREKKLINWCPDCHTALSDLEVEH 199


>gi|28211899|ref|NP_782843.1| valyl-tRNA synthetase [Clostridium tetani E88]
 gi|75541792|sp|Q891R5|SYV_CLOTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28204342|gb|AAO36780.1| valyl-tRNA synthetase [Clostridium tetani E88]
          Length = 880

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 149/389 (38%), Gaps = 45/389 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++  +  ++ M  + ++ ++       +   +S     +P  R ++       
Sbjct: 341 HIHNVSCHDRCNTIIEPMISKQWYVKMKELAKPAIEVVKSGEIKFVPE-RFDKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVWYCKDCGETIVSLEEAKKCSKCSSENLIQDEDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +     F+P D+   G DI+ F    + +        +P    +  
Sbjct: 459 ALWPFSTLGWPDKTE-DLEYFYPTDVLATGYDIIFFWVARMIFSGLHNMKEIPFKTVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G+K+SKSLGN +DP+EVI++ G DALR+ L+   A G D  + ++ ++   N 
Sbjct: 518 GIVRDSEGKKMSKSLGNGVDPLEVIDKYGADALRFMLITGNAPGNDIRFYEERVESARN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          +  +D  ILS  + V++E+ +N++   +  
Sbjct: 577 -FANKIWNASRYVMMNLDKNLMEKYKDCKDYNIADTWILSRLNEVIKEVTDNIEKFELGM 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  +V   +     D Y +  KP  L   +         V   V+     LL   +P + 
Sbjct: 636 ASQKVYDFMWNEFCDWYIELSKP-VLYGEDEKAKGVTFNVLFNVLTSGLKLLHPIMPFIT 694

Query: 471 NKIFDILFVADENRC-----FQSLDQRLK 494
            +IF  + + +E +      +    + LK
Sbjct: 695 EEIF--INIQEEEKTITTSKWPEFKEELK 721



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         + H+GHA +  + D L R  R+ G   L+  G D         
Sbjct: 36  KDKKPYTIVMPPPNITGKLHLGHALDNSMQDFLIRVKRMQGYSTLWLPGQDHASIATEVK 95

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +N  + T                  + ++     RD    L  S  +     T +    
Sbjct: 96  VENELLKTGLKKKEMGREAFLERVWEWSEEYRGRIRDQLKKLGSSADFTRESFTMDDNLD 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+ ++G IYKG     +  +     +D E+    +   +     P+   EE
Sbjct: 156 KAVRAVFVKLYEEGLIYKGNRIVNWCPKCMTALSDAEIEYEENYGNFWHVKYPLVDSEE 214


>gi|167766367|ref|ZP_02438420.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|317496795|ref|ZP_07955125.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711958|gb|EDS22537.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|291559231|emb|CBL38031.1| valyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316895807|gb|EFV17959.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 879

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 148/380 (38%), Gaps = 38/380 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     V+ M +  +F ++       +   ++     +P  R  +       
Sbjct: 340 HEHNVGTHDRCGTTVEPMIKPQWFVKMEELAKPAIEAVKNGDLKFVPE-RYTKTYLHWLE 398

Query: 203 GLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDAL 235
            ++D  +SR+ +                             G K     +  +  W  + 
Sbjct: 399 NIRDWCISRQLWWGHRIPAYYCDECGEVVVARETPEVCPKCGCKHFTQDEDTLDTWFSSA 458

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +T G+ +        F+P +  V G DI+ F    + +  +  +   P    +   
Sbjct: 459 LWPFSTLGWPEKTK-ELDYFYPTNTLVTGYDIIFFWVVRMVFSGYEQTGKSPFDTVLIHG 517

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN I+P++VI + G DALR+ L+   A G D  Y +  +    N  
Sbjct: 518 LVRDEQGRKMSKSLGNGINPLDVIAQYGADALRFTLITGNAPGNDMRYTEKRVIASRN-- 575

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            AN I N  SR + M L+  D    T    T +D+ ILS  + + +++ +NM+   +  A
Sbjct: 576 FANKIWN-ASRFIMMNLEQADFSDVTLEDLTSADKWILSKLNTLAKDVTDNMEKYELGIA 634

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + ++   + E   D Y +  KP      +  +A+ +      V+ +   LL  ++P +  
Sbjct: 635 VQKLNDFLWEEFCDWYIEMVKPRLYNDEDQTKAAALW-TLNTVLTEALKLLHPYMPFITE 693

Query: 472 KIFDILFVADENRCFQSLDQ 491
           +I+  L   +E+       +
Sbjct: 694 EIYCNL-TDEESIMLAKWPE 712



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 22/182 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L RF ++ G + L+  GTD         
Sbjct: 34  ETKQPYTIVIPPPNITGKLHMGHALDETLQDILIRFKKMQGYNALWIPGTDHASIATEVK 93

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
             NA                        + +        + +    D   + F  T ++ 
Sbjct: 94  IINALKEEGIEKEDLGREKFLERAWDWKEEYGGTIIEQMKKLGSSCDWDRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +  + ++ K+ +KG IY+G     +    +   +D EV       ++     PV   E
Sbjct: 152 CSEAVKEVFIKLYEKGYIYRGSRIINWCPVCQTSISDAEVEYEDQAGHFWHIKYPVVGSE 211

Query: 162 EE 163
            E
Sbjct: 212 GE 213


>gi|326201136|ref|ZP_08191008.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988704|gb|EGD49528.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 883

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 138/367 (37%), Gaps = 36/367 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +          V+ +  + ++ R+    +  +          +P  R +++     
Sbjct: 340 PHTHNVGTCQRCRTVVEPLISKQWYVRMKPLAEPAIDVVRDGTTKFVPE-RFSKIYFNWM 398

Query: 202 SGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDA 234
             ++D  +SR+ +                             G K  +  Q  +  W  +
Sbjct: 399 ENIQDWCISRQLWWGHRIPAYYCQECGHMMVQGTAPDTCSKCGSKRIEQDQDTLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +     F+P D+ V G DI+ F    + +         P       
Sbjct: 459 ALWPFSTLGWPDKTE-DLEYFYPTDVLVTGYDIIFFWVARMIFSGMEHMKQEPFKYVFIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP+EVI + G DALR+ L    + G D  Y  + ++   N 
Sbjct: 518 GIVRDSQGRKMSKSLGNGIDPLEVIAQYGTDALRFALTIGNSPGNDLRYSPEKVEAARN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN + N     +    +D D        F+ +D+ I+S  + V +E+ EN++   +  
Sbjct: 577 -FANKVWNASRFVLMNFDEDLDFSKVDKKKFSIADKWIMSRINTVTKEVTENIEKFELGL 635

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            L +V   + E   D Y +  KP +L     +      YV   V+     LL  ++P + 
Sbjct: 636 GLQKVYDFIWEEFCDWYIEMVKP-KLYDRESEGRLEAQYVLNFVLGNAMKLLHPYMPFVT 694

Query: 471 NKIFDIL 477
            +I+  L
Sbjct: 695 EEIYTHL 701



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K ++   I         Q H+GHA +  + D+L R  R+ G   L+  GTD         
Sbjct: 36  KNKKPFTIVIPPPNITGQLHMGHALDNTLQDILIRTKRMQGYSALWLPGTDHASIATEAK 95

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  + A    K++  +     + +    D   + F  T ++ 
Sbjct: 96  IVDALAKDGISKDMLGREKFLEKAWEWRKIYGGRIVEQLKKLGSSCDWERERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                + ++ K+ DKG IYKG     +  +     +D EV        +     PV+  +
Sbjct: 154 LSKAVQEVFLKLYDKGLIYKGERITNWCPKCNTSISDIEVEYEEQAGNFWHIKYPVKDSD 213

Query: 162 E 162
           E
Sbjct: 214 E 214


>gi|225024824|ref|ZP_03714016.1| hypothetical protein EIKCOROL_01711 [Eikenella corrodens ATCC
           23834]
 gi|224942427|gb|EEG23636.1| hypothetical protein EIKCOROL_01711 [Eikenella corrodens ATCC
           23834]
          Length = 463

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 83/287 (28%), Positives = 133/287 (46%), Gaps = 15/287 (5%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPAD--- 259
           L D  +SR    +G +IPD P    YVW+DA   Y+ +     D       +++ AD   
Sbjct: 13  LSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQT 72

Query: 260 --LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              H IGKDIL FHA++WPA L  +    P  V++HGF+   G+K+SKS G  I     +
Sbjct: 73  EMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYL 132

Query: 318 EE-VGVDALRYFLVRE-IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ +  + +RY++  +  +  +D   +      RVN+DL     N+ +R+   I K ++G
Sbjct: 133 EQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEG 192

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +           ++L+  +     I E  +N+   RAL  +++L   V+ Y DA KPWE
Sbjct: 193 RLKNVSGS-----ALLAKLAAESDNIAEQYENREYARALRDIMALADAVNEYVDANKPWE 247

Query: 436 LKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           L K     +R   V    +     L   L   +P+ A      L + 
Sbjct: 248 LAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLD 294


>gi|218778354|ref|YP_002429672.1| valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218759738|gb|ACL02204.1| Valyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 888

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 143/381 (37%), Gaps = 36/381 (9%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE                       V+    + +F +     +K +   E+    I+P  
Sbjct: 328 DEMGLLKKVESHDHGVGQCYRCKTTVEPNLSKQWFVKAGPLAEKAIKAVETKKTRIVPEV 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKI--------------PDDPQY----------- 226
                  ++   ++D  +SR+   WG +I               +DP             
Sbjct: 388 WEKTYFEWL-YNIRDWCISRQ-IWWGHRIPAWTCQDCGEIMVRMEDPDKCTCGSTNLEQE 445

Query: 227 --IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+ D     KA ++P  + + G DIL F    +         
Sbjct: 446 SDVLDTWFSSALWPFSTMGWPDQTQLLKA-YYPTSVLITGFDILFFWVARMMMMGLQFMD 504

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++P             +G+K+SKS GNVIDP+EVIE  G DA R+ L    A G+D    
Sbjct: 505 DVPFKDVYIHALVRDEEGKKMSKSKGNVIDPLEVIESQGTDAFRFTLASFAAMGRDIKLS 564

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              ++        N + N    +++ +  + D       +    D  ILS  ++V+ ++ 
Sbjct: 565 VKRIEG--YRHFINKLWNAARFTLTNVENNPDAAAKASKSRAIPDRWILSRLNQVILQVE 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           E+++    + A   +   V     D Y +A KP   ++   +  +  +     V++   +
Sbjct: 623 ESLEAYQFNEAANILYKFVWHEFCDWYLEAIKPILYREGAQEERNATVATLQRVLKDAIV 682

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL  F+P +  +I+  +  A+
Sbjct: 683 LLHPFIPFVTEEIWHHMPGAE 703



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA  + + D+L R+ R  G +VL+  GTD  G       +  
Sbjct: 38  TYSIVIPPPNVTGVLHMGHALNVTLQDILCRYRRSKGDNVLWMPGTDHAGIATQNVVERQ 97

Query: 66  GVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
             +                   +  Q      +    L  S  +D    T ++      R
Sbjct: 98  LASEGTDRHQVGREAFIERVWEWRKQYGGAIINQLKRLGASCDWDRERFTMDEGLSRAVR 157

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  + D+G IY+G Y   +  R      D EV  
Sbjct: 158 KVFVDLYDQGLIYRGDYIINWCPRCHTALADLEVEH 193


>gi|313905014|ref|ZP_07838384.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470084|gb|EFR65416.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 884

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 141/375 (37%), Gaps = 39/375 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           ++  H  V+ M +  +F R+       L    +     +P     +        +KD  +
Sbjct: 347 HDRCHTTVEPMIKPQWFVRMKEMGQAALDALHTGDLTFVPENY-GKTYEHWLENIKDWCI 405

Query: 210 SRKTFD----------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           SR+ +                              G       +  +  W  +     +T
Sbjct: 406 SRQLWWGHRIPAYYCEECGELVVQRGGAPEKCPKCGCTHFSQEEDTLDTWFSSALWPFST 465

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +        F+P D+ V G DI+ F    + +     +   P    +        +
Sbjct: 466 LGWPEKTP-EMDYFYPTDVLVTGYDIIFFWVIRMMFSGIEQTGKSPFHHVLIHGLVRDSQ 524

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N   AN + 
Sbjct: 525 GRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWERVEASRN--FANKVW 582

Query: 360 NLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           N  SR + M ++  +              + IL   + + +++ ENM    +  A+ +V 
Sbjct: 583 N-ASRFIMMNMEGKEIPESVDVQTLPAPSKWILHKVNELAKDVTENMDKYELGIAVQKVH 641

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + +   D + +  KP  L     +    +L+   EV+     LL  F+P +  +I+  
Sbjct: 642 DFIWDEFCDWFIEMTKP-TLYNGTEEEKGRLLWTLREVLSTALKLLHPFMPFITEEIYCT 700

Query: 477 LFVADENRCFQSLDQ 491
           L   +E+    +  +
Sbjct: 701 LNPEEESVMVSAWPE 715



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I         + H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 34  RDKKPFTIVMPPPNITGKLHMGHALDNTMQDILIRYKRMQGYEALWQPGTDHAAIATEVK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
             N                       + D+  R   +    L  S D      T ++   
Sbjct: 94  VTNMLKDKGIDKHEIGREKFLEHCWAWRDEYGRTIINQLKKLGSSADWSRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                ++ ++ +KG IYKG     +  + +   +D EV       ++   + P+   E
Sbjct: 154 KAVEEVFCRLYEKGWIYKGSRIINWCPKCQTSLSDAEVEHEDQNGFFWHINYPIVGEE 211


>gi|212697050|ref|ZP_03305178.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675825|gb|EEB35432.1| hypothetical protein ANHYDRO_01615 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 875

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 86/409 (21%), Positives = 172/409 (42%), Gaps = 39/409 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  E      E  + A G Y    +  ++ +  + +F ++    
Sbjct: 307 YSGLDRYEARKIMIEDLEKENLLVKTETIEHAVG-YSERTNVVIEPLISKQWFVKMGDLA 365

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              +  Y++    ++P       +++++  ++D  +SR+   WG ++P            
Sbjct: 366 KDAIEVYKNGDLNLIPESLGKTYLNWLE-NIRDWCISRQ-LWWGHRLPVFYTEDGEIIVS 423

Query: 222 -DDPQ--------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
            +DP                 +  W  +      T G+ +  +     F+P D+ V G D
Sbjct: 424 EEDPDENGYLNGKKVTQEEDTLDTWFSSALWPFATLGWPEETE-DYKYFFPTDILVTGYD 482

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + + +   +   P    +F+      +G K+SKSLGN +DPI+V+ + G DA
Sbjct: 483 IIFFWVIRMVFSSLYNTNKTPFDHVLFTGLIRDPQGRKMSKSLGNGVDPIDVVNKYGADA 542

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ ++   + G D  YD+  +    N   AN + N  +R V M + + D +       +
Sbjct: 543 LRFTIITGNSPGNDMRYDEKRIVASRN--FANKLWN-ATRFVLMNIDESDDLEFKDLDLS 599

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D+ IL   + V++E+ +N+    I  A +++   + E   D Y +  K   L   + +
Sbjct: 600 LEDKWILKRLNNVVEEVSKNLDKYEIGLAASRIEDFIWEEFCDWYIEFAK-ERLNSDDEN 658

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           + STV  V + V++ +  LL  F+P +  +I+  L   ++    +S  +
Sbjct: 659 KKSTVKKVLLYVLKDMISLLHPFMPFITEEIYKQLPNKNDMLIVESWPE 707



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         + H+GHA    I D++ R+ R+ G +  +  GTD         
Sbjct: 30  KDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDHASISTEAK 89

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                 +                   + ++     +     + +S  +D    T +K   
Sbjct: 90  VVGKIKSEGKSKDELGRDKFLKECWDWTEEYGGTIKKQLRTVGVSCDWDRDSFTMDKNLT 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++KK+ D G IY+G     +    +   +D EVY      +   
Sbjct: 150 RAVRKVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWY 198


>gi|315924479|ref|ZP_07920700.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622183|gb|EFV02143.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 880

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 88/412 (21%), Positives = 156/412 (37%), Gaps = 42/412 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L  + Y    E +    G  Y   H  V+ M  E +F  +    
Sbjct: 312 YAGMDRYECREAILKDLDAQGYLVKTEDHVHNVGHCYR-CHTTVETMTSEQWFVDMKPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +  ++  +      +P  R  ++       ++D  +SR+   WG +IP            
Sbjct: 371 EPAIAAVQQSKTRFIPE-RFEKIYFNWMENVRDWCISRQ-LWWGHRIPAWTCDDCGELIV 428

Query: 222 -----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                             DP  ++  W  +     +T G+ ++ D  K KF+P D+ V G
Sbjct: 429 AEETPAVCPKCGHTHLTQDPD-VLDTWFSSALWPFSTIGWPEDTDDLK-KFYPNDVLVTG 486

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+ F    + +        +P             +G K+SKSLGN IDP+EVIE+   
Sbjct: 487 YDIIFFWVARMIFMGIDAMGEVPFSDVYIHGLIRDAQGRKMSKSLGNGIDPLEVIEDYSA 546

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DALR+ ++   + G D  + +D ++   N    N I N  SR V M + +   +      
Sbjct: 547 DALRFAIITGNSAGNDIRWTQDKIESSRN--FLNKIWN-ASRFVLMNMTEDTDLDVKNVR 603

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
              +D+ ILS  ++ + E   NM+   +  A +++         D Y +  KP      +
Sbjct: 604 LELTDKWILSRLNQTIAEATANMEKYELGIAASKIYDFTWSEFCDWYIEMVKP-RFNSDD 662

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                  L     V++ +  LL    P +  +I+  L  +D+        + 
Sbjct: 663 AVSKKAALTTLNYVLQNILKLLHPVTPFITEEIYHYLPASDKAIIVAPWPKA 714



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 53/178 (29%), Gaps = 19/178 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         Q H+GHA++  + D L RF R+ G   L+  G D           N
Sbjct: 37  EAYTIIMPPPNITGQLHMGHAFDNTLQDALIRFKRMQGYAALWVPGMDHASIATEVKVLN 96

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
                                   +        R     L  S  +D    T ++     
Sbjct: 97  QIKEEENRSKSDLTREEFLEYAWDWAKFYRNRIRQQITKLGASCDWDRERFTMDEGCSKA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
            +  + ++ + G IYKG     +    +   +D EV    +  +      P    E E
Sbjct: 157 VKSTFVRLYEAGLIYKGSRIINWCPDCQTALSDAEVEYEEENGHLWHLRYPYADGEGE 214


>gi|226325482|ref|ZP_03801000.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758]
 gi|225206225|gb|EEG88579.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758]
          Length = 731

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 161/411 (39%), Gaps = 40/411 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L  E Y    E +    G  ++     V+ M +  +F ++    
Sbjct: 158 YSGMDRYEARKAIVEDLEKEGYLVSIEEHVHNVGT-HDRCKTTVEPMIKPQWFVKMDELA 216

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              ++  ++     +P  R  ++       ++D  +SR+ +                   
Sbjct: 217 KPAINAIKTGELKFVPE-RFGKIYLNWLENIRDWCISRQIWWGHRIPAYYCDECGEVVVA 275

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ +  +     F+P D+ V G D
Sbjct: 276 REMPEKCPHCGCTHLTQDEDTLDTWFSSALWPFSTLGWPEETE-DFKYFYPTDVLVTGYD 334

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + +  +  +   P    +        +G K+SKSLGN IDP+EVI+E G DA
Sbjct: 335 IIFFWVIRMVFSGYAHTGKAPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDEYGADA 394

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR  L+   A G D  +  + ++   N   AN + N  SR + M ++D     P    F 
Sbjct: 395 LRLTLITGNAPGNDMRFYNERVESSRN--FANKVWN-ASRFIMMNMEDKVISKPDEADFE 451

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP- 441
            +D+ ILS  + + +++ ENM    +  A+ +V   + +   D Y +  K + +  ++  
Sbjct: 452 VTDKWILSKVNTLAKDVTENMDKFELGIAVQKVYDFIWDEFCDWYIELVK-YRIYHSDEN 510

Query: 442 -DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              A+  L+    V+     +L  F+P +  +I+  L   +++       Q
Sbjct: 511 YKSANAALWTLKTVLGNALKMLHPFMPFVTEEIYSALVPEEKSLMMSDWPQ 561


>gi|326803842|ref|YP_004321660.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650187|gb|AEA00370.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 881

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 130/350 (37%), Gaps = 35/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++    + L    +         R  +        + D  +SR+   W
Sbjct: 355 VEPRLSTQWFVKMAPLAKQALDNQNTENRVDFYPPRFEQTFVSWMENVHDWVISRQ-LWW 413

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 414 GHQIPAWYHKDSGEVYVGMEAPEDEENWVQDPD-VLDTWFSSALWPFSTMGWPDEEASDY 472

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 473 KRYFPTDTLVTGYDIIFFWVSRMIFQSLEFTGERPFKNVLIHGLIRDSQGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL      G+D  Y  + L+   N    N I N  SR   M L
Sbjct: 533 VDPMDVVDQYGADALRWFLATGSTPGQDIRYYPEKLEAAWN--FINKIWN-ASRYALMNL 589

Query: 371 KDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                        T   D+ IL+  +  + ++ +         A   +   +     D Y
Sbjct: 590 DGMTYDDIDLNNVTSIVDQWILTRLNETIAKVTDRFDAFEFGEAGRALYHFIWNDFCDWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L+  + D   T   V   V+ Q+  LL   +P +  +I+  +
Sbjct: 650 IEMSK-EVLQGDDEDAKHTTRSVLSYVLGQMLALLHPIMPFVTEEIWQHI 698



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +         + H+GHA+++ + D++ R  R+ G D L+  G D  G       + 
Sbjct: 38  EAYSVVIPPPNVTGKLHLGHAWDVTLQDMIVRQKRMQGYDTLWLPGMDHAGIATQAKVEE 97

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                T  + ++ ++  R+    + IS D      T +    + 
Sbjct: 98  KLRKEENLSRYDLGREKFIDKTWEWKEEYAQTIRNQWAKMGISVDYKRERFTLDDGLSEA 157

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            R ++  + +KG IY+G Y   +    +   +D EV    D
Sbjct: 158 VRKVFVTLYEKGLIYRGEYIINWDPVFQTALSDIEVVYKDD 198


>gi|188587843|ref|YP_001921655.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498124|gb|ACD51260.1| valyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 880

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 144/385 (37%), Gaps = 40/385 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     V+ +  + ++ ++       +   ++     +P  R ++       
Sbjct: 341 HAHNVGTHDRCGTTVEPIISKQWYVKMEGLAKPAIEVVKNGKTKFVPE-RFDKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            ++D  +SR+   WG +IP                            +    ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVYYCKDCGEMMVLEEAPTKCCKCGSNNIEQDNDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +     F+P ++ V G DI+ F    + +         P    +  
Sbjct: 459 ALWPFSTLGWPNKTE-DLEYFYPNNVLVTGHDIIFFWVARMIFSGLHCMGETPFNTVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN ++P++VI E G DALR+ +    A G D  Y  + ++   N 
Sbjct: 518 GLIRDSQGRKMSKSLGNGVNPLDVINEYGADALRFMIATGNAPGNDMRYYPERVEASRN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          ++ +D+ ILS  + +++E+ ENM    +  
Sbjct: 577 -FANKIWNASRFVMMNLDKEIMNKYKDCKEYSLADKWILSKMNTLVKEVTENMDKYELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V   +     D Y +  KP      +         V   V+     LL   +P + 
Sbjct: 636 AMQKVYDFMWTEFCDWYIELVKP-VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFIT 694

Query: 471 NKIFDILFVADENRC--FQSLDQRL 493
            +IF  L   +      +   D+ L
Sbjct: 695 EEIFTHLTDEETITTSVWPVFDEAL 719



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D+L RF R+ G   L+  G D         
Sbjct: 36  KNKKPFTIIMPPPNITGELHLGHAFDDTLQDMLIRFKRMQGYAALWLPGEDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + D      R+    L +S  +     T ++   
Sbjct: 96  VANELAKQGYNKKEMGREAFLEKVWEWSDDYRARIRNQVKKLGVSADFTREAFTMDENLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ K+ ++G IY+G     +    +   +D E+       ++   + P+
Sbjct: 156 AAVKHVFVKLYNEGLIYQGNRITNWCTHCQTALSDAEIEYEEQAGHFWHINYPL 209


>gi|325849754|ref|ZP_08170901.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325479983|gb|EGC83063.1| valine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 875

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 87/409 (21%), Positives = 172/409 (42%), Gaps = 39/409 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  E      E  + A G Y    +  ++ +  + +F ++    
Sbjct: 307 YSGLDRYEARKIMIEDLEKENLLVKTETIEHAVG-YSERTNVVIEPLISKQWFVKMEDLA 365

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              +  Y++    ++P       +++++  ++D  +SR+   WG ++P            
Sbjct: 366 KDAIEVYKNGDLNLIPDSLGKTYLNWLE-NIRDWCISRQ-LWWGHRLPVFYTEDGEIIVS 423

Query: 222 -DDPQ--------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
            DDP                 +  W  +      T G+ +  +     F+P D+ V G D
Sbjct: 424 EDDPDENGYLNGKKVTQEEDTLDTWFSSALWPFATLGWPEETE-DYKYFFPTDILVTGYD 482

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + + +   +   P    +F+      +G K+SKSLGN +DPI+V+ + G DA
Sbjct: 483 IIFFWVIRMVFSSLYNTNKTPFDHVLFTGLIRDPQGRKMSKSLGNGVDPIDVVNKYGADA 542

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ ++   + G D  YD+  +    N   AN + N  +R V M + + D +       +
Sbjct: 543 LRFTIITGNSPGNDMRYDEKRIVASRN--FANKLWN-ATRFVLMNIDESDDLEFNNLDLS 599

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D+ IL   + V++E+ +N+    I  A +++   + E   D Y +  K   L  ++ +
Sbjct: 600 LEDKWILKRLNNVVEEVSKNLDKYEIGLAASRIEDFIWEEFCDWYIEFAK-ERLNSSDEN 658

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           + STV  V + V++ +  LL  F+P +  +I+  L    +    +S  +
Sbjct: 659 KKSTVKKVLLYVLKDMISLLHPFMPFITEEIYKQLPNKKDMLIVESWPE 707



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         + H+GHA    I D++ R+ R+ G +  +  GTD         
Sbjct: 30  KDKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDHASISTEAK 89

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                 +                   + ++     +     + +S  +D    T +K   
Sbjct: 90  VVGKIKSEGKSKDELGRDKFLEECWDWTEEYGGTIKKQLRTVGVSCDWDRDSFTMDKNLT 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++KK+ D G IY+G     +    +   +D EVY      +   
Sbjct: 150 RAVRKVFKKMYDDGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWY 198


>gi|81428459|ref|YP_395459.1| valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|90101528|sp|Q38XD1|SYV_LACSS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|78610101|emb|CAI55150.1| Valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 882

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 134/356 (37%), Gaps = 34/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   E+  +     ER     +     + D  +SR+   W
Sbjct: 355 VEARLSTQWFVKMKPLAEMALKNQETDQKVNFVPERFENTFTQWMENVHDWVISRQ-LWW 413

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                             ++  W  +     +T G+ +       
Sbjct: 414 GHQIPAWYHKQTGEMYVGEEAPEDIENWTQDSDVLDTWFSSALWPFSTMGWPNTEAPDFK 473

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 474 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTEQRPFEHVLIHGLIRDEQGRKMSKSLGNGI 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+EVIE+ G DALR+FL      G+D  +    +    N    N I N  SR V M L+
Sbjct: 534 DPMEVIEKYGADALRWFLTSGSTPGQDVRFSYTKMDAAWN--FINKIWN-ASRFVIMNLE 590

Query: 372 DY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           D      +P       +D+ ILS  ++ + ++    +      A   + + +     D Y
Sbjct: 591 DTPAPTKVPEAANLDLTDKWILSQLNQTVADVTRLYEGFEFGEAGRTLYNFIWNDFCDWY 650

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   + +  +   Y    V+ Q   LL   +P +  +I+  +    E+
Sbjct: 651 IEMAK-EVLYGDDQEAIANKRYNLAYVLDQTLRLLHPVMPFVTEEIWQSMPHTGES 705



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +   I         + H+GHA++  + D+L R  R+ G DVL+  G D  G       
Sbjct: 37  DAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDVLWLPGMDHAGIATQAKV 96

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+ +    D    + +S D      T +    D
Sbjct: 97  EAKLAEQGISRYDLGREKFIDQVWEWKDEYAATIHDQWAKMGLSLDYSRERFTLDDGLSD 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 157 AVRKVFVNLYNKGLIYRGEYIINWDPKARTALSDIEVLHQDD 198


>gi|315186220|gb|EFU19981.1| valyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 882

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 82/388 (21%), Positives = 141/388 (36%), Gaps = 39/388 (10%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E        +    H PV+    E +F R+     K L  +E       P +  N   +
Sbjct: 338 KEEPHVHQVGHCYRTHVPVEPYLSEQWFVRMDTMAQKALKAWEEGKIQFFPRKWENT-YT 396

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYV 230
                ++D  +SR+   WG  I +                                ++  
Sbjct: 397 HWLRNIRDWCISRQ-LWWGHRIPVWYCDDCGAQMVLREDPTACTSCGSTNIRQDEDVLDT 455

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +  +  K +F+P    V   DI+ F    +   +      +P   
Sbjct: 456 WFSSWLWPFSTLGWPEETEDLK-RFFPTTTLVTAYDIIFFWVARMIMASLEFMHEVPFRD 514

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              +      +G K+SKSLGN IDP+E++   G DALR+ L    A G+D   DKD  + 
Sbjct: 515 IYITGLVRDKQGRKMSKSLGNGIDPLEIVNVYGADALRFTLAFLAAQGQDVLLDKDTFQ- 573

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            V A  AN I N  SR + M L+    +       T+ D  IL   +R    + + ++  
Sbjct: 574 -VGAHFANKIWN-ASRFILMNLEGRRLIPFEKIEKTDIDRWILHRLNRAAAAVSDALETY 631

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             + A             D Y ++ K   L   +      ++ + + V+ Q   LL  F+
Sbjct: 632 RFNEAAQTAYEFFWSDFCDWYIESAK-LSLNGDDEQEKDRIVSLLLFVLEQALKLLHPFL 690

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLK 494
           P +  +++  L   +      S  +  K
Sbjct: 691 PFVTEELYQKLPTTEGLLILASFPEPRK 718



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 18/177 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GH     + D+L R+HR+ G   L+  GTD  G       + 
Sbjct: 39  KPFVIVIPPPNVTGVLHMGHGLNNSLQDILIRYHRMKGEPTLWIPGTDHAGIATQSVVER 98

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
              +                T     ++ +   +    +  S D      T ++      
Sbjct: 99  KLWSQGVDPRSLGREKFVEITWQHALEHKKIIINQLKKIGASCDWSRERFTLDEGLSKAV 158

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           R ++  + +KG IY+G Y   +S   +    DDEV              PV   +E+
Sbjct: 159 REVFVSLYEKGLIYRGTYLVNWSPGLKTALADDEVEYREVQGRLYYILYPVADSDEK 215


>gi|302343431|ref|YP_003807960.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640044|gb|ADK85366.1| valyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 881

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 80/378 (21%), Positives = 141/378 (37%), Gaps = 40/378 (10%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +       +  +    H  V+ +  + +F ++    ++ L   +     I+P      
Sbjct: 333 LLERRDEHMHNVGHCYRCHTMVEPILSKQWFVKVGPLAEEALKAVQDGRTRIVPEVWTKT 392

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP-------------DDP--------------QYIM 228
              ++ +G++D  +SR+   WG +IP              DP                ++
Sbjct: 393 YYDWM-TGIRDWCISRQ-IWWGHRIPAWYCQCGQVIVSRQDPTVCPACGADQLRRESDVL 450

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPL 286
             W  +     +T G+ D     K KF+P    V   DIL F    +           P 
Sbjct: 451 DTWFSSALWPFSTMGWPDQTAELK-KFYPTSCLVTAFDILFFWVARMMMMGLKFMGEAPF 509

Query: 287 PKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K V+ H  +  + G+K+SKS GNVIDP+ V+++ G DA+R+ L    A G+D    ++ 
Sbjct: 510 -KDVYIHALVRDEHGQKMSKSKGNVIDPLVVMDQFGTDAVRFTLAAFAAQGRDVKLSEER 568

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +      +  N I N    ++  +  + D   P        D  ILS   RV  E    +
Sbjct: 569 IAG--YRNFVNKIWNAARFTLMHL--EGDHQRPEGLEPLLEDRWILSRVGRVADEAALAI 624

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
                + A   V         D Y +  K       +P R +       +V  +L  LL 
Sbjct: 625 DEYRFNDAAGAVYQFAWHEFCDWYLELIKGPLYNDADPARQAATRATLRQVFSRLIRLLH 684

Query: 464 AFVPKLANKIFDILFVAD 481
            F+P +  +++  L  A+
Sbjct: 685 PFMPFVTEELWQRLPGAE 702



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 22/156 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I         Q HIGHA    + D+L RF R++G +VL+  GTD  G       + 
Sbjct: 38  PAYSIVIPPPNVTGQLHIGHALNNTLQDILCRFKRMNGWEVLWMPGTDHAGIATQNVVER 97

Query: 65  AGVTT---------KVFVDQNSRNF-----------RDMADVLDISYDDFIRTTEKRHHD 104
                         + F+++  R             + +    D S + F  T ++    
Sbjct: 98  QLAQEGLNRHDLGREKFIERVWRWRAESGGQIINQLKRLGASCDWSRERF--TMDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
             R ++ ++ ++G IY+G Y   +  R     +D E
Sbjct: 156 AVREVFVRLYEEGLIYRGDYIINWCPRCHTALSDLE 191


>gi|229823987|ref|ZP_04450056.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
 gi|229786341|gb|EEP22455.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
          Length = 880

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 78/358 (21%), Positives = 141/358 (39%), Gaps = 38/358 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           V+      +F R+    ++ ++  ++           R N+        + D  +SR+  
Sbjct: 353 VEPRLSTQWFVRMGPLAEQAIAAQKAQGENTVNFYPPRFNDAYIRWMENIHDWVVSRQ-L 411

Query: 215 DWGIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
            WG +IP                         DP  ++  W  +     +T G+ D    
Sbjct: 412 WWGHQIPAWYHNETGEVYVGMEAPADSQNWTQDPD-VLDTWFSSALWPFSTMGWPDEESA 470

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
              +++P +  V G DIL F    + + +   +   P    +        +G K+SKSLG
Sbjct: 471 DFKRYFPNNTLVTGYDILTFWVSRMMFQSLEFTGRRPFQNVLIHGLIRDAEGRKMSKSLG 530

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP+++IE+ GVD+LR+FL    A G+D  +  D +    N    N I N  SR V M
Sbjct: 531 NGVDPMDIIEQYGVDSLRWFLANGSAPGQDVRFSTDKMDAAWN--FINKIWN-ASRYVLM 587

Query: 369 ILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
            + D      + G   T +D  IL+     + ++    +      A   + S + +   D
Sbjct: 588 NVGDLTLDNLSIGQDLTLADRWILARLQTTIADVTRLFERFEFGEAGRILYSFIWDDYCD 647

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y +  K  E  +      +T   + V V+ Q   LL   +P +  +I+  +   D++
Sbjct: 648 WYIEMTK--EQLQDKEAANTTTKSILVFVLDQFLRLLHPIMPFVTEEIWQQIGGQDKS 703



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA+++ + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAEPYSIVIPPPNVTGKLHLGHAWDVTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     T  + ++ + + R     + IS D      T ++   +
Sbjct: 95  EEKLRGQGLSRYDLGREKFLEQTWAWKEEYAGHIRQQWAKMGISVDYSRERFTLDEGLSE 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
             + ++  + +K  +Y+G Y   +    +   +D EV     +G +Y+ ++
Sbjct: 155 AVKKVFVTLYEKDLLYRGEYIINWDPAAKTSLSDIEVIHKDVEGAFYHMKY 205


>gi|187933633|ref|YP_001886694.1| valyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721786|gb|ACD23007.1| valine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 880

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 144/385 (37%), Gaps = 40/385 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     V+ +  + ++ ++       +   ++     +P  R ++       
Sbjct: 341 HAHNVGTHDRCGTTVEPIISKQWYVKMEGLAKPAIEVVKNGKTKFVPE-RFDKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            ++D  +SR+   WG +IP                            +    ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVYYCKDCGEMMVLEEAPTKCCKCGSNNIEQDNDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +     F+P ++ V G DI+ F    + +         P    +  
Sbjct: 459 ALWPFSTLGWPNKTE-DLEYFYPNNVLVTGHDIIFFWVARMIFSGLHCMGETPFNTVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN ++P++VI E G DALR+ +    A G D  Y  + ++   N 
Sbjct: 518 GLIRDSQGRKMSKSLGNGVNPLDVINEYGADALRFMIATGNAPGNDMRYYPERVEASRN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          ++ +D+ ILS  + +++E+ ENM    +  
Sbjct: 577 -FANKIWNASRFVMMNLDKEIMNKYKDCKEYSLADKWILSKMNTLVKEVTENMDKYELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V   +     D Y +  KP      +         V   V+     LL   +P + 
Sbjct: 636 AMQKVYDFMWTEFCDWYIELVKP-VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFIT 694

Query: 471 NKIFDILFVADENRC--FQSLDQRL 493
            +IF  L   +      +   D+ L
Sbjct: 695 EEIFTHLTDEETITTSVWPVFDEAL 719



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         + H+GHA++  + D+L RF R+ G   L+  G D         
Sbjct: 36  KKKKPFTIIMPPPNITGELHLGHAFDDTLQDMLIRFKRMQGYAALWLPGEDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + D      R+    L +S  +     T ++   
Sbjct: 96  VANELAKQGYNKKEMGREAFLEKVWEWSDDYRARIRNQVKKLGVSADFTREAFTMDENLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ K+ ++G IY+G     +    +   +D E+       ++   + P+
Sbjct: 156 AAVKHVFVKLYNEGLIYQGNRITNWCTHCQTALSDAEIEYEEQAGHFWHINYPL 209


>gi|194468301|ref|ZP_03074287.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453154|gb|EDX42052.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 884

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 135/354 (38%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   ++        ER     +     + D  +SR+   W
Sbjct: 359 VEARLSTQWFVKMKPLAEAALKNQDTDDRVNFVPERFEHTFTQWMENIHDWVISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ +       
Sbjct: 418 GHRIPAWYNKQTGEVYVGMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 478 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGRAPFKNVLLHGLIRDEQGRKMSKSLGNGI 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ GVDALR+FL+     G+D  +    +    N    N I N     +  + +
Sbjct: 538 DPMDVIKKYGVDALRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWNASRYVIMNLGE 595

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
               ++P    +  +D+ ILS  +  ++++ E         A   + + +     D Y +
Sbjct: 596 MPAPVLPDKSKWDLADQWILSRLNATVKQVNEQFDKFEFGEAGRALYNFIWNDFCDWYIE 655

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K  +L     +  +    +   V+ Q   +L   +P +  K++  +    E+
Sbjct: 656 MTK-EKLNNGTNEEKNNTKNILGYVLDQTLKMLHPIMPFVTEKLWQSMPHDGES 708



 Score = 79.8 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 35  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWVPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 95  VEARLRKQGISRYDLGRDKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 155 KAVRKVFVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDD 197


>gi|210621752|ref|ZP_03292801.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275]
 gi|210154634|gb|EEA85640.1| hypothetical protein CLOHIR_00746 [Clostridium hiranonis DSM 13275]
          Length = 887

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/406 (18%), Positives = 156/406 (38%), Gaps = 48/406 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   S    L++E +    + +  A G  Y   H  ++    E +F ++    
Sbjct: 312 YAGMDRYECRKSIIDDLKEEGFLIKIKEHDHAVGTCYR-CHTTIEPRLSEQWFVKMDKLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
           +  +          +P +     + +++  ++D  +SR+ +                   
Sbjct: 371 EPAIKILNDKELQFVPDKFDKTYLQWLE-NIRDWCISRQLWWGHQIPAYYCQECGEVVVA 429

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       + ++  W  +     +T G+ +N +     ++P ++ V G D
Sbjct: 430 REMPEKCPKCGCTHFKQDEDVLDTWFSSALWPFSTLGWPNNTE-ELNYYYPTNVLVTGYD 488

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + + A       P    +        +G K+SKSLGN IDP+E+I++ G DA
Sbjct: 489 IIFFWVVRMAFAAMFCMNEKPFSHVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDQFGADA 548

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----- 379
           LR+ L+   + G D  +  + +      + A    N +  +   +  ++D  +       
Sbjct: 549 LRFTLITGNSPGNDMRFYMERV------EFARNFANKLWNASRFVFMNWDEEMMNGVTRS 602

Query: 380 --PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWE 435
                 T +D+ I+S  + +++++  NM    +  AL +          D Y +  KP  
Sbjct: 603 DVEANLTLADKWIISRANNIVKDVTHNMDKFELGMALQKAYDFTWSEYCDWYIEMVKP-R 661

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           L   + +     LY    V+  +  LL  F+P +  +IFD L  A+
Sbjct: 662 LYGDDVEAKKAALYTLTYVLETILKLLHPFIPFITEEIFDHLPTAN 707



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + DVL R+ R+ G + L+  GTD         
Sbjct: 34  KDKKPFTIMMPPPNITGQLHMGHALDHTLQDVLIRWKRMQGCETLWLPGTDHASIATEVK 93

Query: 62  AQNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                        + F  +     + + D  D     F  T ++
Sbjct: 94  VVERIKKEEGKTKYELGRDEFMKRAWAWKEEFGGKIENQLKKLGDSCDWDRQRF--TMDQ 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +D  +  + K+ ++G IY+G     +    +   +D EV  
Sbjct: 152 GCNDAVKEFFIKLYEEGHIYRGHRIINWCPNCKTTLSDAEVEH 194


>gi|169601246|ref|XP_001794045.1| hypothetical protein SNOG_03483 [Phaeosphaeria nodorum SN15]
 gi|160705892|gb|EAT88688.2| hypothetical protein SNOG_03483 [Phaeosphaeria nodorum SN15]
          Length = 1177

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 167/340 (49%), Gaps = 20/340 (5%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-- 212
           + V+W  E  Y FRLS ++DKLL +Y+++P +I P  R  EV+  V++GL+DLS+SR   
Sbjct: 9   SEVEWSSETNYHFRLSFFRDKLLDFYKANPTWIAPEHRMKEVVQAVEAGLEDLSISRPYE 68

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
              WGI++P D    +YVW+DAL NY+T  GY   P       WPAD  VIGKDI+RFH 
Sbjct: 69  RLSWGIRVPSDDTQTIYVWLDALVNYITAAGYPWAPGRETVGGWPADCQVIGKDIVRFHC 128

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           IYWPAFL++ +LPLPK + +H      G K+SKS G V+DP   I+  G D +R+++  E
Sbjct: 129 IYWPAFLMALSLPLPKHILTHAHWTLGGSKMSKSTGRVVDPFHAIDRFGPDVMRFYMGHE 188

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-------ILKDYDGMIPTPGAFTE 385
                D  YD   + +  N  L N +GN+ SR +          ++              
Sbjct: 189 GGIQDDASYDNIRIIQLYNKFLLNQLGNMASRVLRNKKWSVKGAVERVGNRPAEEWQEGP 248

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK-----KTN 440
                 +  + +   + +  Q     +A+  +   V           PW           
Sbjct: 249 GSRFWKNSLTTIASNVDQAFQLNDPRKAVRILADFVRGT------SSPWAKILPFGPGEP 302

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +    +++   E +R + ILLQ ++P  AN + D L + 
Sbjct: 303 GEDVDKIIFEAAEALRMVGILLQPWMPNKANLLLDQLGIP 342


>gi|319937416|ref|ZP_08011823.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807782|gb|EFW04375.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 876

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 146/405 (36%), Gaps = 32/405 (7%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++   +           +  E +    G      H  V+    + +F ++    
Sbjct: 309 YANMDRFECRTALLEDFEKAGVVDHIETHMHQVGHS-ERSHAIVEPYLSKQWFVKMKPLA 367

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG---------------- 217
           +  L+  E   +      R  +        ++D  +SR+   WG                
Sbjct: 368 EAALANQEKDSQVNFVPGRFEKTFKQWMENIEDWCISRQ-LWWGHQVPAWYHKETGEVYV 426

Query: 218 -------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                  I      + ++  W  +     +T G+ +       +++P D  V G DI+ F
Sbjct: 427 GKTAPEDIDNWKQDEDVLDTWFSSALWPFSTMGWPNTESEMFKRYFPTDTLVTGYDIIFF 486

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + + +   +   P    +        +G K+SKSLGN +DP++VI+E G D LR+F
Sbjct: 487 WVSRMIFQSLEFTHERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDEYGADTLRFF 546

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L    A G D  Y  + L+   N    N I N     +  I +D      +      SD+
Sbjct: 547 LTTNSAPGMDLRYIPEKLEASWN--FINKIWNSARFVLMNIDEDMKYEDLSFTYLNLSDQ 604

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            IL+  + V++ + ENM         +++ + + +     Y +  K   L   N      
Sbjct: 605 WILNRLNDVIRSVDENMDKFEFVNVGSELYNFIWDDFCSWYIELSKA-HLNSDNDTEKRA 663

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                V V+  +  LL  F+P +  +I+  +   +E+ C     +
Sbjct: 664 TQETLVYVLNAIVRLLHPFMPFVTEEIYQSIPHLEESICIAKWPE 708



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 70/179 (39%), Gaps = 19/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA++  + D++ R+ R+ G D L+  G D  G       
Sbjct: 33  SKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGFDALWLPGMDHAGIATQAKV 92

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
           +                        + ++ +   R+  + L +S D      T ++   +
Sbjct: 93  EARMREDGLSRYDLGREKFLEKAWSWKEEYASIIRNQWEKLGLSLDYSKERFTLDEGLSE 152

Query: 105 TCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             + ++  + +KG IY+G     W  ++  A  N + ++K  +G  Y  ++  V+  E 
Sbjct: 153 AVKTVFITLYEKGLIYQGERIINWDPVQRTALSNIEVIHKEIEGHMYYFKYKVVENDET 211


>gi|297520080|ref|ZP_06938466.1| methionyl-tRNA synthetase [Escherichia coli OP50]
          Length = 390

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 12/254 (4%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SKS G  I     +  
Sbjct: 4   YHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNH 63

Query: 320 VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
              D+LRY+   +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++ 
Sbjct: 64  FDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL- 122

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              A   +D  +    +   + I E  +++   +A+ ++++L    +RY D Q PW + K
Sbjct: 123 ---ANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAK 179

Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
                     +  + + + R L   L+  +PKL  +    L  A     +  + Q L  G
Sbjct: 180 QEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTA---LTWDGIQQPLL-G 235

Query: 497 FMLHKTFDPIFPRF 510
             ++  F  ++ R 
Sbjct: 236 HKVN-PFKALYNRI 248


>gi|300856628|ref|YP_003781612.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436743|gb|ADK16510.1| valyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 882

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 144/381 (37%), Gaps = 38/381 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     ++ M  + +F ++ +  +  +          +P  R  +       
Sbjct: 341 HAHNVGCHDRCGTTIEPMLSKQWFVKMKSLAEPAIKVVRDKKVKFVPE-RFEKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVTDGEATKCTKCGSTNLEQDKDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +  K  F+P +  V G DI+ F    + +       ++P    +  
Sbjct: 459 ALWPFSTLGWPDKTEDLK-CFYPNNTLVTGYDIIFFWVARMIFSGLYCMDDIPFENVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DPIEVI+E G DALR+ L+   A G D  Y  + ++   N 
Sbjct: 518 GIVRDSQGRKMSKSLGNGVDPIEVIDEYGADALRFTLITGNAPGNDIRYYPERVEASRN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  I +D          ++ +D  I+S  + +++E+ +N++   +  
Sbjct: 577 -FANKIWNASRFVLMNIDEDLMSKYKDCKDYSGADRWIMSKLNTLVKEVTDNIEKFELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   +     D Y +  KP  +   +         V   V+     LL   +P + 
Sbjct: 636 ASQKLYDFIWGELCDWYIELVKP-VMYGEDEKAKGVAYNVLNNVLSTSLQLLHPVMPFIT 694

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L+   E+       +
Sbjct: 695 EEIYTHLYTEYESITISKWPE 715



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  I D++ R  R+ G   L+  G D         
Sbjct: 36  KNKKSYTIVIPPPNITGKLHLGHALDDTIQDIIIRTKRMQGYSTLWLPGEDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +                     T  + ++     R+    L  S D F R   T ++  
Sbjct: 96  VEKELLKNGIEKKKIGREKFLEKTWDWSNEYRGRIRNQVKKLGCSTD-FTRERFTMDEGL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV 157
           +   +  + K+ + G IY+G     +  + +   +D E+ Y+   G +++ ++  V
Sbjct: 155 NKAVKKFFVKLYNDGLIYQGNRIINWCPKCQTAISDAEIEYEEQQGHFWHIKYKIV 210


>gi|125625212|ref|YP_001033695.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124494020|emb|CAL99020.1| ValS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300072022|gb|ADJ61422.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 880

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKNAIANQATEDAVEFYPPRFNDTFMQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGEMYVGEEAPEGEGWTQDEDVLDTWFSSALWPFSTMGWPDENSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  D +    N    N I N VSR + M  +D 
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-VSRYILMNAEDV 588

Query: 374 D--------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                      +    A   +D  IL+  +  ++ + E M       A   + + + +  
Sbjct: 589 SADAVSSALTKVANKTAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   +   +         V + V+ Q+  LL   +P    +IF+ L
Sbjct: 649 ANWYLELTK-EVMFGEDEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           + E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  DAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + D+ +   ++    + IS D      T ++    
Sbjct: 95  AARLAEDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +  +     +D EV  
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIH 193


>gi|323339480|ref|ZP_08079759.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093094|gb|EFZ35687.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 887

 Score =  196 bits (499), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 69/345 (20%), Positives = 129/345 (37%), Gaps = 31/345 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   E+        ER  +  +     + D  +SR+   W
Sbjct: 361 VEARLSTQWFVKMKPLAEAALKNQETDDAVKFVPERFEKTFTQWMENVHDWVISRQ-LWW 419

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 420 GHQIPAWYNKKTGETYVGEEAPEDIENWEQDTDVLDTWFSSALWPFSTMGWPDTESEDFK 479

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 480 RYFPTDTLVTGYDIIFFWVSRMIFQSLEFTGRRPFKHVLLHGLIRDEQGRKMSKSLGNGI 539

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL      G+D  +    +    N    N I N     +  +  
Sbjct: 540 DPMDVIDKYGADALRWFLSTGSTPGQDVRFSYTKMDAAWN--FINKIWNASRFVIMNLDD 597

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
           D    +P    +  SD+ ILS  ++ ++E+           A   + + +     D Y +
Sbjct: 598 DTKAELPEKSEWQLSDKWILSRLNKTVKEVARLFDGFEFGEAGRALYNFIWNDFCDWYIE 657

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K  +L  ++         +   V+ Q   L+   +P +  KI+
Sbjct: 658 MAK-EDLNGSDEKLKHNTQNILCYVLDQTLRLMHPIMPFVTEKIW 701



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +   +     L +S  YD    T ++   
Sbjct: 96  VEARLAEQGISRYDLGREKFVDKVWEWKDEYASIIKQQWAKLGLSLDYDRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVSLYKKGLIYRGEYIINWDPKARTALSDIEVIHQDD 198


>gi|315658074|ref|ZP_07910946.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496403|gb|EFU84726.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 876

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 135/355 (38%), Gaps = 34/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRALDNQKTTDRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ +       
Sbjct: 410 GHQIPAWYHKETGEIYVAEQAPKDIENWEQDEDVLDTWFSSALWPFSTLGWPNESADDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  + G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALITGYDIIFFWVARMIFQGLEFTERRPFQDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIEE G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 588 DFAVEDIDLSGNLSLADKWILTRLNETIETVTDLSDKYEFGEVGRVLYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +  K P  +   +  +  T   V    + Q+  +L  F+P +  +I+  L    +
Sbjct: 648 EMSKIP--MNGADEAQKQTTRSVLSYTLDQMMRMLHPFMPFVTEEIWQSLPHEGD 700



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K ++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKKPYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  + A    + +     + +  +   LD S + F  T ++ 
Sbjct: 92  VEAKLNEQGISRHDIGREKFLEQAWKWKEEYASFIRQQWAKLGLGLDYSRERF--TLDEG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
                + ++  + +KG IY+G     +  +     +D EV      G +Y+ ++
Sbjct: 150 LSQAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGHFYHFKY 203


>gi|281492830|ref|YP_003354810.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376482|gb|ADA65968.1| Valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 880

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKNAIANQTTEDAVEFYPPRFNDTFMQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                           ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGEMYVGEEAPEGEGWTQDADVLDTWFSSALWPFSTMGWPDENAEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P  + +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKRALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  D +    N    N I N VSR + M  +D 
Sbjct: 532 MDVIEKYGTDALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-VSRYILMNAEDV 588

Query: 374 D--------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                      +    A   +D  IL+  +  ++ + E M       A   + + + +  
Sbjct: 589 SADAVSSALTKVANKTAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   +   +         V + V+ Q+  LL   +P    +IF+ L
Sbjct: 649 ANWYLELTK-EVMFGEDEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           + E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  DAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + D+ +   ++    + IS D      T ++    
Sbjct: 95  AARLAEDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +  +     +D EV  
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIH 193


>gi|289550579|ref|YP_003471483.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180111|gb|ADC87356.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 876

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 135/355 (38%), Gaps = 34/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + L   ++         R     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMKPLAQRALDNQKTTDRIDFYPPRFENTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ +       
Sbjct: 410 GHQIPAWYHKETGEIYVAEQAPKDIENWEQDEDVLDTWFSSALWPFSTLGWPNESADDFK 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  + G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALITGYDIIFFWVARMIFQGLEFTERRPFQDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIEE G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVIEEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNGARFSLMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D+        G  + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 588 DFAVEDIDLSGNLSLADKWILTRLNETIETVTDLSDKYEFGEVGRVLYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +  K P  +   +  +  T   V    + Q+  +L  F+P +  +I+  L    +
Sbjct: 648 EMSKIP--MNGADEAQKQTTRSVLSYTLDQMMRMLHPFMPFVTEEIWQSLPHEGD 700



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 32  KSKKPYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +  D      T ++   
Sbjct: 92  VEAKLNEQGISRHDIGREKFLEQAWEWKEEYASFIRQQWAKLGLGLDYSRERFTLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
              + ++  + +KG IY+G     +  +     +D EV      G +Y+ ++
Sbjct: 152 QAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGHFYHFKY 203


>gi|320546286|ref|ZP_08040606.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449063|gb|EFW89786.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 883

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 134/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  E      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +D
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNED 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +      +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLEQASANVEKVAAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVQLYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|15674155|ref|NP_268330.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537370|sp|Q9CDP6|SYV_LACLA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12725235|gb|AAK06271.1|AE006446_3 valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 880

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKNAIANQTTEDAVEFYPPRFNDTFMQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGEMYVGEEAPEGEGWTQDEDVLDTWFSSALWPFSTMGWPDENSADFIRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  D +    N    N I N VSR + M  +D 
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-VSRYILMNAEDI 588

Query: 374 D--------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                      +    A   +D  IL+  +  ++ + E M       A   + + + +  
Sbjct: 589 SADAVSSALTKVANKTAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   +   +         V + V+ Q+  LL   +P    +IF+ L
Sbjct: 649 ANWYLELTK-EVMFGEDEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           + E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  DAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + D+ +   ++    + IS D      T ++    
Sbjct: 95  AARLAEDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +  +     +D EV  
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIH 193


>gi|308070408|ref|YP_003872013.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305859687|gb|ADM71475.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 888

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 135/366 (36%), Gaps = 39/366 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +     K +   ++        +R           ++D  +SR+   W
Sbjct: 360 VEPYLSTQWFVEMKPLAAKAIEVQKAGNGVNFVPDRFERTYLHWIENVRDWCISRQ-LWW 418

Query: 217 G--IKIPDDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNP 248
           G  I    D +                           ++  W  +     +T G+ +  
Sbjct: 419 GHRIPAWYDEETGEVIVSAEDPTTLPEYAGRKLKQDEDVLDTWFSSALWPFSTLGWPEQT 478

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +  K +++P ++ V G DI+ F    + + A   +  +P    +         G K+SKS
Sbjct: 479 EDLK-RYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKS 537

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP++VI++ G DA+RY +      G+D  +  + +++  N   AN I N  SR  
Sbjct: 538 LGNGVDPLDVIDQYGTDAMRYMISTSSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 594

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+          G  + +D  IL   +   ++I   +           + + + +  
Sbjct: 595 LMNLEGVTSADIDITGDLSTADRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDL 654

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   N +       V   V+ +   ++  F+P ++ +I+  L    E 
Sbjct: 655 CDWYIEFAK-LSLYGDNAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGET 713

Query: 484 RCFQSL 489
               + 
Sbjct: 714 ITLAAW 719



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           E E   I           HIGHA +  + D++ R  R+ G D L+  G D  G     K+
Sbjct: 42  EAEPFTIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKV 101

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +  +  G+T               + D    N  +  + +  S D      T ++    
Sbjct: 102 EQKLREEGLTRYDLGREKFLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSQ 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+  KG IY+G     +        +D EV  
Sbjct: 162 AVREVFVKLYKKGLIYRGKRIINWDPAARTALSDIEVEY 200


>gi|302671511|ref|YP_003831471.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316]
 gi|302395984|gb|ADL34889.1| valyl-tRNA synthetase ValS [Butyrivibrio proteoclasticus B316]
          Length = 890

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 78/389 (20%), Positives = 144/389 (37%), Gaps = 16/389 (4%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            +     + G   +   +    ++ + +   DE+ K A       +   +    E+ Y F
Sbjct: 341 EIEDYSHNVGTHDRCHTTVEPMIKAQWFVKMDELIKPAVKAVKEGEIKLIPPRMEKTY-F 399

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
             +          +      +P    ++    V S              G          
Sbjct: 400 NWTDNIRDWCISRQLWWGHRIPAYYCDKCGEVVVSKTTP----TVCPKCGETHFTQDPDT 455

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +      T G+  +    K  F+P D+ V G DI+ F    + + ++      P
Sbjct: 456 LDTWFSSALWPFETLGWPHDTKELK-YFFPTDVLVTGYDIIFFWVIRMIFSSYENMGTYP 514

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +F       +G K+SKSLGN IDP+++IE  G DALR  L+   A G D  +  + 
Sbjct: 515 FHTVLFHGLVRDSQGRKMSKSLGNGIDPLDIIENYGADALRLTLITGNAPGNDMRFYNER 574

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           ++   N   AN + N  SR + M + +          P      D+ ILS  +  ++E+ 
Sbjct: 575 VENSRN--FANKVWN-ASRFIMMNMAEDAKSAIHQDMPEGLEPVDKWILSKLNNTVKEVT 631

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ENM++  +  A+ +V   + +   D Y +  KP      +       L+    V+     
Sbjct: 632 ENMEHYELGIAVQKVYDFIWDEFCDWYIEMVKPRLYNSDDAVSHEAALWTLQTVLLNALK 691

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSL 489
           LL  ++P +  +IF  +   +E+      
Sbjct: 692 LLHPYMPFITEEIFCTMQDEEESIMISDW 720



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 34  ETKKPFTIVIPPPNITGKLHMGHALDNTMQDILIRFKRMQGYNALWQPGTDHASIATEVK 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             +A                      +  +           +  S  +D    T ++  +
Sbjct: 94  IIDALKAEGIDKRDLGREKFLERAWEWKKEYGGTIIQQLKKMGSSCDWDRERFTMDEGCN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +    ++ K+ +KG IYKG     +    +   +D EV       +      PV
Sbjct: 154 EAVTEVFCKMHEKGYIYKGSRIVNWCPVCKTSISDAEVEYEEQAGHLWHIKYPV 207


>gi|266625215|ref|ZP_06118150.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862886|gb|EFC95184.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 464

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 9/283 (3%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G       +  +  W  +     +T G+    +  K  F+P D+ V G DI+ F  
Sbjct: 23  CPKCGCTHLTQDEDTLDTWFSSALWPFSTLGWPKETEDLK-YFYPTDVLVTGYDIIFFWV 81

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +     +  LP    +        +G K+SKSLGN IDP+EVI++ G DALR  L+
Sbjct: 82  IRMVFSGIEHTGQLPFNTVLMHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMTLI 141

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G D  +  + ++   N   AN + N  SR + M ++            T +D+ I
Sbjct: 142 TGNAPGNDMRFYWERVEASRN--FANKVWN-ASRFIMMNIEKAPDSRAELSDLTMADKWI 198

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS  + + +++ +N+    +  AL +V   + E   D Y +  KP    + +  +A+ + 
Sbjct: 199 LSKANSLARDVTDNLDKFELGIALQKVYDFIWEEFCDWYIEMVKPRLWNEEDTTKAAAIW 258

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                V+     LL  ++P L  +IF  L   +E+    +  +
Sbjct: 259 -TLKTVLINSLKLLHPYMPFLTEEIFCNLQDEEESIMVSAWPE 300


>gi|331002328|ref|ZP_08325846.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330410144|gb|EGG89578.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 880

 Score =  196 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 152/381 (39%), Gaps = 39/381 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ + +  +F  ++      +   E+     +P       + ++
Sbjct: 337 VPHSHNVGRHDRCKTVVEPLIKPQWFVSMNEMAKPAIKAIETGELKFVPESYAKTYLHWL 396

Query: 201 KSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWI 232
           +  ++D  +SR+   WG +IP                               +  +  W 
Sbjct: 397 E-NIRDWCISRQ-LWWGHQIPAYTCSKCAELVVARQKPDCCPKCGCNELVQDEDTLDTWF 454

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ DN +     F+P D+ V G DI+ F    + +  +  +   P    +
Sbjct: 455 SSALWPFSTLGWPDNTE-EMDYFYPTDVLVTGYDIIFFWVVRMVFSGYEQTGKTPFHTVL 513

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   
Sbjct: 514 IHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMMLMTGNAPGNDMRFYYERVESAR 573

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN I N  +R + M + +             SD+ ILS  +R+++E+  N+    +
Sbjct: 574 N--FANKIWN-AARLIMMNIGESKPEAIDSSKLMISDKWILSKSNRLVKEVTTNLDKYEL 630

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             ALA++     E   D Y +  K     K +  R  T L V   V+  +  LL  F+P 
Sbjct: 631 GIALAKIYDFAWEEFCDWYIEMVKVRLWNKEDESR-DTALSVLTYVLNIILKLLHPFMPF 689

Query: 469 LANKIFDILFVADENRCFQSL 489
           +  +I+  +    +    +  
Sbjct: 690 ITEEIYCTINEDAKTVMIEPW 710



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KDKKPFTIIMPPPNITGQLHMGHALDNTMQDILIRYKRMAGYEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + +       +    L  S  +D    T ++   
Sbjct: 93  VIEKLKAEGKDKHELGREGFLKEAWDWKNDYGTRIINQLQRLGSSADWDRERFTMDEHGQ 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              + ++ ++ +KG IYKG     +    +   +D EV        +     PV   E
Sbjct: 153 KAVKEVFVRLYEKGYIYKGNRIINWCPVCKTSISDAEVEHIEMDGNFWHIKYPVAGEE 210


>gi|251780852|ref|ZP_04823772.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085167|gb|EES51057.1| valine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 880

 Score =  196 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 144/385 (37%), Gaps = 40/385 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     V+ +  + ++ ++       +   +S     +P  R ++       
Sbjct: 341 HSHNVGTHDRCGTTVEPIISKQWYVKMEGLAKPAIEVVKSGKTKFVPD-RFDKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDA 234
            ++D  +SR+   WG +IP                            +    ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVYYCKDCGEMMVLEEVPTKCCKCGSNNIEQDNDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +     F+P ++ V G DI+ F    + +         P    +  
Sbjct: 459 ALWPFSTLGWPNKTE-DLEYFYPNNVLVTGHDIIFFWVARMIFSGLHCMGETPFNTVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN ++P++VI E G DALR+ +    A G D  Y  + ++   N 
Sbjct: 518 GLIRDSQGRKMSKSLGNGVNPLDVISEYGADALRFMIATGNAPGNDMRYYPERVEASRN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          ++ +D+ ILS  + +++E+ ENM    +  
Sbjct: 577 -FANKIWNASRFVMMNLDKEIMNKYKDCVEYSLADKWILSKMNTLVKEVTENMDKYELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V   +     D Y +  KP      +         V   V+     LL   +P + 
Sbjct: 636 AMQKVYDFMWTEFCDWYIELVKP-VFYGEDEKAKGVAYNVLNTVLVTGLKLLHPAMPFIT 694

Query: 471 NKIFDILFVADENRC--FQSLDQRL 493
            +IF  L   +      +   D+ L
Sbjct: 695 EEIFTHLTDEETITTSVWPVFDEAL 719



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D+L RF R+ G   L+  G D         
Sbjct: 36  KNKKPFTIIMPPPNITGELHLGHAFDDTLQDMLIRFKRMQGYAALWLPGEDHASIATEVK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + D      R+    L +S  +     T ++   
Sbjct: 96  VANELAKQGYNKKEMGREAFLEKVWEWSDDYRARIRNQVKKLGVSADFTREAFTMDENLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ K+ ++G IY+G     +    +   +D E+       ++   + P+
Sbjct: 156 AAVKHVFVKLYNEGLIYQGNRITNWCTHCQTALSDAEIEYEEQAGHFWHINYPL 209


>gi|304407500|ref|ZP_07389152.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343451|gb|EFM09293.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 886

 Score =  196 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 131/365 (35%), Gaps = 37/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +    D+ +             +R           ++D  +SR+   W
Sbjct: 358 VEPYLSTQWFVAMKPLADRAIEAQREGKGVNFVPDRFERTYLQWIENVRDWCISRQ-LWW 416

Query: 217 GIKI---------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           G +I                               + ++  W  +     +T G+ D   
Sbjct: 417 GHRIPAWHHAETGEIYVGTEAPEGADAEGSPWKQDEDVLDTWFSSALWPFSTLGWPDEDH 476

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               +F+P DL V G DI+ F    + + A   +  +P    +          +K+SKSL
Sbjct: 477 EDFKRFYPTDLLVTGYDIIYFWVARMIFTALEFTDQIPFKDVLMHGLVRDENNQKMSKSL 536

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP++VIE+ G DA+R+ L      G+D  +  + +++  N   AN I N  SR   
Sbjct: 537 GNGIDPLDVIEKYGADAMRFMLSTNNTPGQDLRFRWEKVEQARN--FANKIWN-ASRFAL 593

Query: 368 MILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           M L+               +D  IL   +   +++   + +         + + + +   
Sbjct: 594 MNLEGVSAADIDITVPLGTADRWILHRLNETSRDVTRMIDSYDFGETGRLLYNFIWDDLC 653

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           D Y +  K   L  ++         V   V+ +   L+  F+P ++ +I+  L    E  
Sbjct: 654 DWYIEFAK-LNLYGSDAAAKKATQSVLAYVLDRTQRLIHPFMPFISEEIWQHLPHEGETI 712

Query: 485 CFQSL 489
              + 
Sbjct: 713 TLAAW 717



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K  I           HIGHA +  + D++ R  R+ G D L+  G+D  G       
Sbjct: 40  DAPKYTIVIPPPNVTGMLHIGHALDFTLQDIMTRTKRMQGFDALWLPGSDHAGIATQTKV 99

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + +  +   R+    +    D      T ++    
Sbjct: 100 EQKLREQGLSRYDLGREKFLEKVWEWKETYNNTIREQWAKMGFGLDYSRERFTLDEGLSR 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+ +KG IY+G     +        +D EV  
Sbjct: 160 AVRQVFVKLYEKGLIYRGKKIINWDPAARTALSDIEVEY 198


>gi|291531784|emb|CBK97369.1| valyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 882

 Score =  196 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 79/388 (20%), Positives = 148/388 (38%), Gaps = 42/388 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +          V+      +F  +       +   +S     +P    N  + +++
Sbjct: 339 PHKHNVGCCQRCGTTVEPRASYQWFVSMKQLAQPAIDVVKSGELRYIPQRFENGYLYWME 398

Query: 202 SGLKDLSLSRKTFDWGIKI-----------------------------PDDPQYIMYVWI 232
             ++D  +SR+   WG +I                                 +  +  W 
Sbjct: 399 -NIRDWCISRQ-LWWGHRIPAYYCQNKECGHTEITLDGIDTCPKCGAPMKQDEDTLDTWF 456

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +        F+P +  V G DI+ F    + +     +   P    +
Sbjct: 457 SSALWPFSTLGWPEKTA-DLEYFYPTNTLVTGYDIIPFWVARMIFSGLEHTGQKPFKDVL 515

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                    G K+SKSLGN +DP+EVI++ G DALR  LV   A G D  + +  +    
Sbjct: 516 IHGLVRDELGRKMSKSLGNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSR 575

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N  SR + M L +       P      D+ ILS+ + +++ +  N+ +  +
Sbjct: 576 N--FANKLWN-ASRYILMNLPEDMQGAVLPENLPIEDKWILSLYNDLIKNVTSNLDSYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A+  +   + +   D Y +  KP   +     RA+    V V V++ +  LL  F+P 
Sbjct: 633 GVAVQNLFDFIWDVYCDWYIELTKPRIAEGGETARAA--QNVLVYVMQGILKLLHPFMPF 690

Query: 469 LANKIFDILF-VADENRCFQSLDQRLKP 495
           +  +I+  +  VAD++   +S+     P
Sbjct: 691 ITEEIWQSMPIVADKDNNPESIMISAWP 718



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I  +      Q H GHA +  + D+L R+ R+ G   L+  GTD          
Sbjct: 35  KKKPYTIVISPPNITGQLHTGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            NA                      +              L  S  +D    T ++    
Sbjct: 95  VNAMKEEGLTKDDVGREGFLERAWEWKKVYGGRIVQQLKKLGSSCDWDRERFTLDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  + +KG IY G     +    +   +D E        ++   + P+
Sbjct: 155 AVQKVFIDLYNKGLIYHGERIINWCPNCKTSISDIECEYEEQDGFFWHINYPL 207


>gi|295112120|emb|CBL28870.1| valyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 883

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/367 (21%), Positives = 130/367 (35%), Gaps = 39/367 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+    E +F R     ++ +   +       P +   +        ++D  
Sbjct: 347 HCQRCGTTVEPYLSEQWFVRTKPLAERGVQAVKDGRITWTPEQW-EKTYFHWMENIRDWC 405

Query: 209 LSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDALTNYLT 240
           +SR+   WG +IP               DP              + ++  W  +     +
Sbjct: 406 ISRQ-LWWGHRIPAWTCADCRHVTVAETDPAECEKCGSRNIAQDEDVLDTWFSSALWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +        F+P  L V G DI+ F    +          +P             
Sbjct: 465 TMGWPERTPTLD-YFYPTSLMVTGFDIIFFWVARMIMMGLEFMDEVPFKDVYIHSLIRDE 523

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG+K+SKS GNVIDP+ +I++ G DALR  L      G+D     D ++        N +
Sbjct: 524 KGDKMSKSKGNVIDPLVMIDQYGADALRMALAALSTQGRDILLSSDKIE--TYRHFMNKL 581

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M L D +            D  IL+ C  V Q+I + +    I  A   + 
Sbjct: 582 WN-AARFALMNLDD-EPQPIDRARLRLQDRWILTRCQEVTQKITKCIDGYDIGEAARSLY 639

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  KP       P+R  T   V  EV + L  LL  F+P +  +++  
Sbjct: 640 DFTWGDVCDWYIEMSKPALRGDEGPERRRTAQGVLDEVFKTLLPLLHPFIPFVTEELWAA 699

Query: 477 LFVADEN 483
               D +
Sbjct: 700 FGWGDTS 706



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 55/162 (33%), Gaps = 22/162 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-- 60
            +E   I           H+GHA+     D+L R  R+ G  VL+  GTD  G       
Sbjct: 37  SKEAFSIVIPPPNVTGSLHMGHAFNNTFQDILCRTKRMQGYSVLWLPGTDHAGIATQNVV 96

Query: 61  -----------------AAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                            A        K  + D+  +  + + +  D   + F  T ++  
Sbjct: 97  EKDLAKKGLTRHDLGREAFVKKVWEWKEVYGDRIIKQMKRLGNSCDWRRERF--TFDEGL 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
               R ++ ++  K  IYKG Y   +  R     +D EV   
Sbjct: 155 SRAVRAVFVRLYKKDLIYKGKYIINWCSRCHTALSDLEVEYR 196


>gi|307243608|ref|ZP_07525751.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492977|gb|EFM64987.1| valine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 883

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 91/453 (20%), Positives = 163/453 (35%), Gaps = 56/453 (12%)

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
            +T     +      R   + +++  DD                        D Y+    
Sbjct: 275 KMTPAHDPNDFEVGQRHQLEEINVMNDD-----------ATMNDLAGKYAGMDRYECRKV 323

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
               L +  Y    E +  A G  Y   H  V+      +F ++       +   +    
Sbjct: 324 LLADLEEAGYLIKVEKHDHAVGTCYR-CHTTVEPRLSLQWFVKMDELAKPAIDILKKGEL 382

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIM------------- 228
             +P +     + +++  ++D  +SR+   WG +I      D  +IM             
Sbjct: 383 KFVPDKFDKTYLQWLE-NIRDWCVSRQ-LWWGHQIPAYYCQDCGHIMVSEETPHECPKCK 440

Query: 229 -----------YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
                        W  +      T G+ D  D     ++P  + V G DI+ F    + +
Sbjct: 441 SSNIKQDEDVLDTWFSSGLWPFETMGWPDQTDMLD-YYYPTSVLVTGYDIIFFWVVRMAF 499

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A       P    +        +G K+SKSLGN IDP+E+I++ G DALR+ L    + 
Sbjct: 500 SAMFCMNEKPFEHVLIHGLVRDSEGRKMSKSLGNGIDPLEIIDQYGADALRFTLTTGNSP 559

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-----GMIPTPGAFTESDESI 390
           G D  +  + ++     +  N + N  SR V M L+D                T +D+ I
Sbjct: 560 GNDMRFYMERVE--FARNFNNKLWN-ASRFVFMNLEDESLLDNLTRESVEANLTLADKWI 616

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVL 448
           +S  +R+++E+  NM    +  AL +          D Y +  KP  L   + +     L
Sbjct: 617 ISRANRLVKEVNYNMDQFDLGIALQKAYDFTWSEYCDWYIEIVKP-RLYGDDREAKRAAL 675

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           Y    V+ ++  LL  F+P +  +I+  L   +
Sbjct: 676 YTLTYVLEKILKLLHPFIPFITEEIYSYLPTVE 708



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 23/182 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D+L R+ R+DG + L+  GTD         
Sbjct: 34  KTKKSFSIVMPPPNITGQLHMGHALDDTLQDILTRWKRMDGYEALWIPGTDHASIATEVK 93

Query: 62  A---------------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                 ++A    + F  +     + +    D   + F  T ++
Sbjct: 94  VVDKIKKETGKSKYEIGREEFLEHAWAWKEEFGGKIVNQVKKLGASCDWDLERF--TMDE 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             +      + K+ ++G IY+G     +    +   +D EV        +     P++  
Sbjct: 152 GCNKAVTKFFVKLYEEGHIYRGNRIINWCPDCKTTLSDAEVEHEDQEGNFWHIKYPIKDS 211

Query: 161 EE 162
           EE
Sbjct: 212 EE 213


>gi|148992322|ref|ZP_01822045.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488257|ref|ZP_02712456.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147928948|gb|EDK79960.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183573136|gb|EDT93664.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332074380|gb|EGI84856.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 883

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 133/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNEAGEIYVGEEAPAGDGWKQDEDVLDTWFSSALWPFSTMGWPNTETTDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPNSTLVTGYDIIPFWVSRMIFQGIEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDARFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 --DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             D      T  A  E+    D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|256545439|ref|ZP_05472801.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398835|gb|EEU12450.1| valine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 875

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/366 (21%), Positives = 160/366 (43%), Gaps = 38/366 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++       +  Y++    ++P       +++++  ++D  +SR+   W
Sbjct: 349 IEPLISKQWFVKMEDLAKDAIEVYKNGDLNLIPDSLGKTYMNWLE-NIRDWCISRQ-LWW 406

Query: 217 GIKIP-------------DDPQY--------------IMYVWIDALTNYLTTTGYLDNPD 249
           G ++P             DDP                 +  W  +      T G+ +  +
Sbjct: 407 GHRLPVFYTEDGEIIVSEDDPDENGYLDGKKVTQEEDTLDTWFSSALWPFATLGWPEETE 466

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                F+P D+ V G DI+ F    + + +   +   P    +F+      +G K+SKSL
Sbjct: 467 -DYKYFFPTDILVTGYDIIFFWVIRMVFSSLYNTNKTPFDHVLFTGLIRDPQGRKMSKSL 525

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DPI+V+ + G DALR+ ++   + G D  YD+  +    N   AN + N  +R V 
Sbjct: 526 GNGVDPIDVVNKYGADALRFTIITGNSPGNDMRYDEKRIVASRN--FANKLWN-ATRFVL 582

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           M + + D +       +  D+ IL   + V++E+ +N+    I  A +++   + E   D
Sbjct: 583 MNVDENDDIEFKNLDLSLEDKWILKRLNNVVEEVSKNLDKYEIGLAASRIEDFIWEEFCD 642

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K   L   + ++ +TV  V + V++ +  LL  F+P +  +I+  L    +   
Sbjct: 643 WYIEFAK-ERLNSDDDNKKATVKKVLLYVLKDMISLLHPFMPFITEEIYKQLPNKKDMLI 701

Query: 486 FQSLDQ 491
            ++  Q
Sbjct: 702 VETWPQ 707



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA    I D++ R+ R+ G +  +  GTD         
Sbjct: 30  ENKKPFTIVMPPPNITGKLHLGHALNNTIQDIIIRYKRMQGYEACWIPGTDHASISTEAK 89

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++     +     + +S  +D    T +K   
Sbjct: 90  VVEKIKNEGKSKDDLGRDKFLEECWDWTEEYGGTIKRQLRTVGVSCDWDRDSFTMDKNLT 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              R ++KK+ D+G IY+G     +    +   +D EVY      +   
Sbjct: 150 RAVRKVFKKMYDEGLIYRGNRIVNWDPEAKTALSDAEVYHKDQEGHLWY 198


>gi|301793771|emb|CBW36159.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 883

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 133/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNEAGEIYVGEEAPAGDGWKQDEDVLDTWFSSALWPFSTMGWPNTETTDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPNSTLVTGYDIIPFWVSRMIFQGIEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 --DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             D      T  A  E+    D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ S   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYSTTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|224540962|ref|ZP_03681501.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526113|gb|EEF95218.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
          Length = 874

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 140/365 (38%), Gaps = 31/365 (8%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H  V+    + +F ++    +  L   E+        ER  +  S   + ++D  +SR+ 
Sbjct: 349 HAIVEPYLSKQWFVKMKPLAENALKNQETDDRVDFVPERFEKTFSNWMNNIEDWCISRQ- 407

Query: 214 FDWGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
             WG +I                           + ++  W  +     +T G+ +  D 
Sbjct: 408 VWWGHRIPAWYNNETGELYVGREAPEDIENWTQDEDVLDTWFSSALWPFSTMGWPNTEDP 467

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
              +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLG
Sbjct: 468 MFKRYFPTDTLVTGYDIIFFWVSRMMFQSIEFTGRRPFKNVLIHGLIRDEQGRKMSKSLG 527

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP++VI+E G D+LR+FL+   + G D  Y    LK   N    N I N     +  
Sbjct: 528 NGVDPMDVIDEYGADSLRWFLLNNSSPGADMRYVPAKLKSTWN--FINKIWNSARYVLMN 585

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
           I +D             +D+ IL+  + V++ + ENM          ++   + +     
Sbjct: 586 IDEDQQLEELDYATLNLADKWILNRLNEVIRNVDENMDKFEFINVGTELYRFIWDDFCSW 645

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y +  K   L   +     + L   V V+  +  LL   +P +  +I+  +   +E+   
Sbjct: 646 YIELSK-LHLTGDDEVAKKSALNTLVYVLNTIVRLLHPIMPFVTEEIYQAIPHNEESIVI 704

Query: 487 QSLDQ 491
               +
Sbjct: 705 SKWPE 709



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            ++   I         + H+GHA++  + D++ R+ R+ G D L+  G D  G       
Sbjct: 34  TKKPYSIVIPPPNVTGKLHLGHAWDTTMQDMIIRYKRMQGYDALWLPGMDHAGLATQAKV 93

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
                           +        + ++ +   R     L +S D      T ++   D
Sbjct: 94  EARLREQGISRYDLGREKLVDKIWEWKEEYADIIRAQWAKLGLSLDYSKERFTFDEGLSD 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPV 157
             R ++ ++ +KG IY+G     +        ++ EVY    +G  Y   ++ V
Sbjct: 154 AVREVFVRLYEKGLIYQGEKIINWDPVQRTALSNIEVYHEDIEGHMYYFNYHIV 207


>gi|310827210|ref|YP_003959567.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
 gi|308738944|gb|ADO36604.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
          Length = 882

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/411 (19%), Positives = 149/411 (36%), Gaps = 40/411 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L++       E +    G+ Y      V+ M  E +F ++    
Sbjct: 312 YAGMDRYECRKAVVEDLKELGLLEKIEDHVHNVGECYRCGTT-VETMTSEQWFVKMEPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
              +    +     +P  R +++       ++D  +SR+   WG +I             
Sbjct: 371 KPAIEAVRNRDTQFVPD-RFSKIYFNWMENIRDWCISRQ-LWWGHQIPAYYCDDCGEMVV 428

Query: 221 ---------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              +  +  W  +     +T G+ +       KF+P D+ V G 
Sbjct: 429 AKEMPAVCPKCGGTHFTQDENALDTWFSSALWPFSTLGWPEKTP-DLEKFYPNDVLVTGY 487

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + +        +P             +G K+SKSLGN IDP+E+IE+   D
Sbjct: 488 DIIFFWVARMIFMGLYNMGEVPFADVYIHGLIRDSQGRKMSKSLGNGIDPLEIIEQFSAD 547

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGA 382
           ALR+ ++   + G D  +  + L+   N    N I N     +  + ++  D        
Sbjct: 548 ALRFSIITGNSAGNDIRWQDEKLEASRN--FLNKIWNAARFVLMNLDENIMDQQDAALAN 605

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
              +D+ ILS  + V++++ +NM    +  A  +V         D Y +  KP  L   +
Sbjct: 606 LENTDKWILSRMNDVVRDVTQNMDKYELGIAAQKVYDFAWNEYCDWYIELVKP-RLYGDD 664

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
               +   Y    V+  +  LL   +P +  +I+  L  A E        +
Sbjct: 665 ETTKAAAQYTLNLVLTNILKLLHPVIPFITEEIYGYLPGAGEAIIVSEWPE 715



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 54/172 (31%), Gaps = 19/172 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I         Q H+GHA++  + DVL RF R+ G   L+  G D            
Sbjct: 37  KSFTIVMPPPNITGQLHMGHAFDDTLQDVLTRFKRMQGYAALWVPGMDHASIATEVKVVE 96

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
                                   +        R+    L  S  +D    T ++   + 
Sbjct: 97  KIRNEEGKTKEELGREEFLKRAWDWALTYKDRIREQVKKLGASCDWDRERFTMDEGCSEA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++G IYKG     +    +   +D EV       +      P+
Sbjct: 157 VKETFVRLYEEGLIYKGSRIINWCPDCKTALSDAEVEYAEQAGHLWHIRYPI 208


>gi|259502839|ref|ZP_05745741.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169206|gb|EEW53701.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 883

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 132/354 (37%), Gaps = 31/354 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   ++        ER     +     + D  +SR+   W
Sbjct: 358 VEARLSTQWFVKMKPLAEMALKNQQTDDRVNFIPERFEHTFTQWMENIHDWVISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYNKQTGEVYVGMEAPQDAENWEQDSDVLDTWFSSALWPFSTMGWPDTDSADFK 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 477 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGKAPFKNVLLHGLIRDEQGRKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ GVDALR+FL+     G+D  +    +    N    N I N     +  + +
Sbjct: 537 DPMDVIKKYGVDALRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWNASRYVIMNLGE 594

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
                +P    +  +D  ILS  +  ++++ E  +          + + +     D Y +
Sbjct: 595 MPAPQLPAKDKWDLADRWILSRLNATIEQVTEMSEKFEFGEVGRALYNFIWNDFCDWYIE 654

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             K  +L     +  +    +   V+ Q   LL   +P +  K++  +    E+
Sbjct: 655 MTK-EKLNNGTDEEKADTKNILGYVLDQTLKLLHPIMPFVTEKLWQSMPHDGES 707



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWVPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         L IS  YD    T ++  +
Sbjct: 94  VEARLRKQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKLGISVDYDRERFTLDEGLN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 154 KAVRKVFVDLYKKGLIYRGTYIINWDPQARTALSDIEVVHKDD 196


>gi|219856195|ref|YP_002473317.1| hypothetical protein CKR_2852 [Clostridium kluyveri NBRC 12016]
 gi|219569919|dbj|BAH07903.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 898

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 146/381 (38%), Gaps = 38/381 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     ++ M  + +F ++ +     +   ++     +P  R  +       
Sbjct: 357 HVHNVGCHDRCETTIEPMLSKQWFVKMESLAKPAVDVVKNKKVKFIPE-RFEKTYFNWME 415

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 416 NIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVSDRDPSKCSKCNSSNIEQDKDVLDTWFSS 474

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +N +  K  F+P +  V G DI+ F    + +       ++P    +  
Sbjct: 475 ALWPFSTLGWPENTEDLK-CFYPNNTLVTGYDIIFFWVARMIFSGLYCMDDIPFENVLIH 533

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DPIEVI E G DALR+ L+   A G D  Y  + ++   N 
Sbjct: 534 GIVRDSEGRKMSKSLGNGVDPIEVIGEYGADALRFALITGNAPGNDIRYYPERVESARN- 592

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + ++          ++++D+ ILS  + + +E+ +N++   +  
Sbjct: 593 -FANKIWNASRFVLMNLDENIMDKYKACREYSDADKWILSRLNTLAKEVTDNIEKFELGI 651

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   +     D Y +  KP  +   +         V   V+     L    +P + 
Sbjct: 652 AAQKMYDFIWGEFCDWYIELVKP-VMYGGSEKEKGVAYNVLNNVLVTSLQLFHPIMPFIT 710

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L+   E+    S  +
Sbjct: 711 EEIYSHLYTDCESITVSSWPE 731



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 20/179 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA +  I D++ R  R+ G + L+  G D          
Sbjct: 53  TKKSYTIVIPPPNITGKLHLGHALDDTIQDIIIRTKRMQGYNTLWVPGEDHASIATEVKV 112

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
           +   +                 T  + D+     R+    L  S D F R   T ++  +
Sbjct: 113 EKELLKDGVVKKEIGREAFLKRTWEWTDEYRARIREQIKKLGCSVD-FTRERFTMDEGLN 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R  + K+ ++G IY+G     +  +     +D E+  G    ++      V   +E
Sbjct: 172 KAVRKFFVKLYEEGFIYQGNRIINWCPKCHTAISDAEIEYGEQQGHFWHIKYKVIDSDE 230


>gi|116513122|ref|YP_812029.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108776|gb|ABJ73916.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 880

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKNAIANQATEDAVEFYPPRFNDTFMQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGEMYVGEEAPEGEGWTQYEDVLDTWFSSALWPFSTMGWPDENSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  D +    N    N I N VSR + M  +D 
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-VSRYILMNAEDV 588

Query: 374 D--------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                      +    A   +D  IL+  +  ++ + E M       A   + + + +  
Sbjct: 589 SADAVSSALTKVANKTAGNVTDRWILTRLNDTVERVTEQMDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   +   +         V + V+ Q+  LL   +P    +IF+ L
Sbjct: 649 ANWYLELTK-EVMFGEDEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           + +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  DAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + D+ +   ++    + IS D      T ++    
Sbjct: 95  AARLAEDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +  +     +D EV  
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIH 193


>gi|222099723|ref|YP_002534291.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572113|gb|ACM22925.1| Valyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 868

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 89/414 (21%), Positives = 155/414 (37%), Gaps = 53/414 (12%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L ++ +    E Y  + G  Y      ++    + +F       
Sbjct: 312 YRGLDRYEAREKIVKDLEEQGFLVKIEDYTHSVGHCYR-CDTVIEPKLSDQWFVATKPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY--- 226
            + +   E       P  R  ++       ++D  +SR+   WG +I      D  +   
Sbjct: 371 KRGIEAVEKGEIKFFPE-RWTKIYLNWMYEIRDWCISRQ-LWWGHRIPVWYCQDCGHINV 428

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ +  +  K +++P DL V G 
Sbjct: 429 SEEDVEKCEKCGSTNLKQDEDVLDTWFSSALWPFSTLGWPEETEDLK-RYYPTDLLVTGF 487

Query: 266 DILRFHAIYWPAFLLSANLPLPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEE 319
           DI+ F    W A ++              V+ H  +  K G K+SKSLGN IDP+EVI+E
Sbjct: 488 DIIFF----WVARMIMMGYEFMNEKPFSHVYIHQLVRDKYGRKMSKSLGNGIDPLEVIDE 543

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D +R+ L    A G+D   D            AN I N  +R V M L+DY      
Sbjct: 544 YGADPMRFTLAILAAQGRDIKLDPRYFDA--YKKFANKIWN-ATRFVLMNLEDY--KEVP 598

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
                  D+ IL+  ++ ++E+   ++N   + A   + +   +   D Y +A KP    
Sbjct: 599 LENLKTVDKWILTRLNKTVKEVTSALENYDFNIAARTIYNFFWDEFCDWYIEASKPRL-- 656

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
               +    V  + V+ +     LL  F+P L  +++  L V  E+       +
Sbjct: 657 --KTEERHLVQTLLVKTLDTSLRLLHPFMPFLTEELWQKLPVDGESITIAKWPE 708



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 19/177 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  I         + H+GHA  + + D++ R+ R+ G DVL+  G D  G     A + 
Sbjct: 37  EKFSIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEK 96

Query: 65  AGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             + T+                  + ++  R  R+    L  S D      T ++     
Sbjct: 97  FLLQTQGKTREEIGREKFLEITWEWANKYRREIREQIKALGASVDWTRERFTLDEGLSRA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            R ++ ++  KG IY+G Y   +  R +   +D+EV              PV+  +E
Sbjct: 157 VRKVFVELYKKGLIYRGKYIVNWCPRCKTVLSDEEVEHKEHQSKLYYVKYPVKDSDE 213


>gi|227431198|ref|ZP_03913252.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352960|gb|EEJ43132.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 894

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 132/363 (36%), Gaps = 14/363 (3%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +       S     ++   E                V+++            ++    
Sbjct: 356 HSERTGVQVESRLSTQWFVKMEPLAKQILDMQKNDDEKVEFVPARFEDTFSRWMENIRDW 415

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
                  +   I    +     +  L   + +     W      DP  ++  W  +    
Sbjct: 416 VISRQLWWGHQIPAWYKNKGTDQEKLYVGTEAPAGDGW----ERDPD-VLDTWFSSALWP 470

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
            +T G+ +  DG  A+++P +  V G DI+ F    + +     +   P    +      
Sbjct: 471 FSTMGWPEKLDGDFARYYPTNTLVTGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIR 530

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN +DP++VIE+ G DALR+FLV     G+D  +  + +    N    N
Sbjct: 531 DGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLVTGSTPGQDLRFTYEKMDSAWN--FIN 588

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N     +  + +D    +P     T +D+ ILS  + V+  +  N        A  +
Sbjct: 589 KIWNASRYVIMNLDEDTPSTLPDMSQLTLADQWILSRLNTVVTNVTRNFDKFEFGEAGRE 648

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +     D Y +  K  E    + D+A  V      V+ Q   LLQ  +P +   I+
Sbjct: 649 LYNFIWSDFADWYIEMTK--ETLNGDQDKA-PVQQTLAYVLDQTLRLLQPIMPFVTEAIW 705

Query: 475 DIL 477
             +
Sbjct: 706 QEM 708



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 41  EPEPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKV 100

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + ++ +   +     + +S  +D    T ++  + 
Sbjct: 101 EQRLRGEGVSRYDLGREKFVEQVWDWKNEYATTIKQQWGKMGLSLDFDRERFTLDEGLNK 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
               ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 161 AVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIEVIYQDD 202


>gi|310643589|ref|YP_003948347.1| valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
 gi|309248539|gb|ADO58106.1| Valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
          Length = 888

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 134/372 (36%), Gaps = 39/372 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +     K +   ++        +R           ++D  +SR+   W
Sbjct: 360 VEPYLSTQWFVEMKPLAAKAIEAQKAGNGVNFVPDRFERTYLHWIENVRDWCISRQ-LWW 418

Query: 217 G--IKIPDDPQ--------------------------YIMYVWIDALTNYLTTTGYLDNP 248
           G  I    D +                           ++  W  +     +T G+ +  
Sbjct: 419 GHRIPAWYDEETGEVIVSAEDPTTLPEYAGRKLKQDEDVLDTWFSSALWPFSTLGWPEQT 478

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +  K +++P ++ V G DI+ F    + + A   +  +P    +         G K+SKS
Sbjct: 479 EDLK-RYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKS 537

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP++VIE+ G DA+RY +      G+D  +  + +++  N   AN I N  SR  
Sbjct: 538 LGNGVDPLDVIEQYGTDAMRYMISTSSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 594

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+          G  +  D  IL   +   ++I   +           + + + +  
Sbjct: 595 LMNLEGVTAADIDITGDLSTVDRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDL 654

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   N +       V   V+ +   ++  F+P ++ +I+  L    E 
Sbjct: 655 CDWYIEFAK-LSLYGDNAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGET 713

Query: 484 RCFQSLDQRLKP 495
               +       
Sbjct: 714 ITLAAWPAYDPA 725



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           E E   I           HIGHA +  + D++ R  R+ G D L+  G D  G     K+
Sbjct: 42  EAEPFTIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKV 101

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +  +  G+T               + D    N  +  + +  S D      T ++    
Sbjct: 102 EQKLREEGLTRYDLGREKFLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSK 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+  KG IY+G     +        +D EV  
Sbjct: 162 AVREVFVKLYKKGLIYRGKRIINWDPAARTALSDIEVEY 200


>gi|291556681|emb|CBL33798.1| valyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 882

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/388 (20%), Positives = 147/388 (37%), Gaps = 42/388 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                          V+      +F  +       +   +S     +P    N  + +++
Sbjct: 339 PHKHKVGCCQRCGTTVEPRASYQWFVSMKQLAQPAIDVVKSGELRYIPQRFENGYLYWME 398

Query: 202 SGLKDLSLSRKTFDWGIKI-----------------------------PDDPQYIMYVWI 232
             ++D  +SR+   WG +I                                 +  +  W 
Sbjct: 399 -NIRDWCISRQ-LWWGHRIPAYYCQNKECGHTEITLDGIDTCPKCGAPMKQDEDTLDTWF 456

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +        F+P +  V G DI+ F    + +     +   P    +
Sbjct: 457 SSALWPFSTLGWPEKTA-DLEYFYPTNTLVTGYDIIPFWVARMIFSGLEHTGQKPFKDVL 515

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                    G K+SKSLGN +DP+EVI++ G DALR  LV   A G D  + +  +    
Sbjct: 516 IHGLVRDELGRKMSKSLGNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSR 575

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N  SR + M L +       P      D+ ILS+ + +++ +  N+ +  +
Sbjct: 576 N--FANKLWN-ASRYILMNLPEDMQGAVLPENLPIEDKWILSLYNDLIKNVTSNLDSYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A+  +   + +   D Y +  KP   +     RA+    V V V++ +  LL  F+P 
Sbjct: 633 GVAVQNLFDFIWDVYCDWYIELTKPRIAEGGETARAA--QNVLVYVMQGILKLLHPFMPF 690

Query: 469 LANKIFDILF-VADENRCFQSLDQRLKP 495
           +  +I+  +  VAD++   +S+     P
Sbjct: 691 ITEEIWQSMPIVADKDNNPESIMISAWP 718



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+ G   L+  GTD          
Sbjct: 35  KKKPYTIVIPPPNITGQLHMGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            NA                      +              L  S  +D    T ++    
Sbjct: 95  VNAMKEEGLTKDDVGRDGFLERAWEWKKVYGGRIVQQLKKLGSSCDWDRERFTLDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  + +KG IY G     +    +   +D E        ++   + P+
Sbjct: 155 AVQKVFIDLYNKGLIYHGERIINWCPNCKTSISDIECEYEEQDSFFWHINYPL 207


>gi|227529668|ref|ZP_03959717.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350458|gb|EEJ40749.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 885

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/349 (20%), Positives = 135/349 (38%), Gaps = 33/349 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   E+         R     +     + D  +SR+   W
Sbjct: 360 VEARLSTQWFVKMKPLAEAALKNQETDDRVNFIPGRFEHTFTQWMENIHDWVISRQ-LWW 418

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     +T G+ D       
Sbjct: 419 GHRIPAWYNKKTGEVYVGMEAPKDAENWEQDKDVLDTWFSSALWPFSTMGWPDTDSADFK 478

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 479 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGI 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ GVDALR+FL+     G+D  +    +    N    N I N  SR V M L 
Sbjct: 539 DPMDVIKKYGVDALRWFLITGSTPGQDIRFSYTKMDAAWN--FINKIWN-ASRYVIMNLG 595

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D    ++P    +  +D  ILS  +  ++++    +      A   + + +     D Y 
Sbjct: 596 DMPAPVLPEKSKWDLADRWILSRLNATVKQVNAQFEKFEFGEAGRALYNFIWNDFCDWYI 655

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K  +L     +  +    +   V+ Q+  L+   +P +  K++  +
Sbjct: 656 EMTK-EKLNNGTAEEQANTKNILGYVLDQILKLMHPIMPFVTEKLWQSM 703



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 36  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T +K  +
Sbjct: 96  VEARLRKQGISRYDLGREKFVQQVWDWKDEYADIIHKQWAKMGISVDYDRERFTLDKGLN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDD 198


>gi|153955828|ref|YP_001396593.1| valyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146348686|gb|EDK35222.1| ValS [Clostridium kluyveri DSM 555]
          Length = 882

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 146/381 (38%), Gaps = 38/381 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++     ++ M  + +F ++ +     +   ++     +P  R  +       
Sbjct: 341 HVHNVGCHDRCETTIEPMLSKQWFVKMESLAKPAVDVVKNKKVKFIPE-RFEKTYFNWME 399

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVWYCKDCGEVIVSDRDPSKCSKCNSSNIEQDKDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +N +  K  F+P +  V G DI+ F    + +       ++P    +  
Sbjct: 459 ALWPFSTLGWPENTEDLK-CFYPNNTLVTGYDIIFFWVARMIFSGLYCMDDIPFENVLIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DPIEVI E G DALR+ L+   A G D  Y  + ++   N 
Sbjct: 518 GIVRDSEGRKMSKSLGNGVDPIEVIGEYGADALRFALITGNAPGNDIRYYPERVESARN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + ++          ++++D+ ILS  + + +E+ +N++   +  
Sbjct: 577 -FANKIWNASRFVLMNLDENIMDKYKACREYSDADKWILSRLNTLAKEVTDNIEKFELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  ++   +     D Y +  KP  +   +         V   V+     L    +P + 
Sbjct: 636 AAQKMYDFIWGEFCDWYIELVKP-VMYGGSEKEKGVAYNVLNNVLVTSLQLFHPIMPFIT 694

Query: 471 NKIFDILFVADENRCFQSLDQ 491
            +I+  L+   E+    S  +
Sbjct: 695 EEIYSHLYTDCESITVSSWPE 715



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 20/179 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA +  I D++ R  R+ G + L+  G D          
Sbjct: 37  TKKSYTIVIPPPNITGKLHLGHALDDTIQDIIIRTKRMQGYNTLWVPGEDHASIATEVKV 96

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
           +   +                 T  + D+     R+    L  S D F R   T ++  +
Sbjct: 97  EKELLKDGVVKKEIGREAFLKRTWEWTDEYRARIREQIKKLGCSVD-FTRERFTMDEGLN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R  + K+ ++G IY+G     +  +     +D E+  G    ++      V   +E
Sbjct: 156 KAVRKFFVKLYEEGFIYQGNRIINWCPKCHTAISDAEIEYGEQQGHFWHIKYKVIDSDE 214


>gi|306832917|ref|ZP_07466049.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424816|gb|EFM27950.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 883

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 135/355 (38%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  E      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +D
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNED 587

Query: 373 YDGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +          A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDQASANVDKVVAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|325977658|ref|YP_004287374.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177586|emb|CBZ47630.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 883

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 135/355 (38%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  E      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +D
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNED 587

Query: 373 YDGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +          A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDQASANVDKVVAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|297588484|ref|ZP_06947127.1| valine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573857|gb|EFH92578.1| valine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 872

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 151/369 (40%), Gaps = 34/369 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H  V+ +  + +F ++       L  Y++     +P  R  +V       ++D  
Sbjct: 344 HCERCHTTVEPLISKQWFVKMDKLAKLALDAYKNEEIRFIPK-RFEKVYVNWLENIRDWC 402

Query: 209 LSRKTFDWGIKI----------------PDDPQY------IMYVWIDALTNYLTTTGYLD 246
           +SR+   WG ++                  DP+        +  W  +     +T G+ +
Sbjct: 403 ISRQ-LWWGHRLPVYYHNETGEVVVARKNPDPEKYTQDPDTLDTWFSSALWPFSTLGWPN 461

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  K  F+P ++ V G DI+ F    + + +      +P      +      +G K+S
Sbjct: 462 ETEDLK-YFFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPFKDVYLTGLVKDSQGRKMS 520

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDPIEVI++ G DALR+ L+     G D  +  + ++   N +  N + N  SR
Sbjct: 521 KSLGNGIDPIEVIDQYGADALRFALITGNTPGNDSRFYMEKVEA--NRNFCNKLWN-ASR 577

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-- 422
            V M ++D +            D+ I+S  + V+ E+  N+    I  A  ++       
Sbjct: 578 FVFMNVED-EVKNIDDVELQIEDKWIISSLNDVIDEVSTNLNKYEIGIAAEKIYDFTWNV 636

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  KP  L   + +   + + V +  +  +  LL  F+P +  +I+  L   ++
Sbjct: 637 FCDWYIELVKP-RLYGDDSNLKESAISVLIYTLTNVIKLLHPFMPYITEEIYSYLPNKND 695

Query: 483 NRCFQSLDQ 491
               ++  +
Sbjct: 696 MLINETWPK 704



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I           H+GHA    I D+L R +R+DG   L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNVTGNLHLGHALNNTIQDILIRKNRMDGYSALWVPGTDHASIATEAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
             +                       +  +   N ++    L +S D      T +    
Sbjct: 93  VVSKLKEEGKSKESLGRDGFLEASWDWTHEYGGNIKNQLKKLGVSCDWSREAFTLDDNLT 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +    ++ K+ +   IY+G     +        +D EV    +  Y+  
Sbjct: 153 EAVEEVFIKMYNDDLIYQGDRIVNWCPNCHTAISDIEVVHEDESGYFWN 201


>gi|28378904|ref|NP_785796.1| valyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254557109|ref|YP_003063526.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|81631055|sp|Q88UX7|SYV_LACPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28271741|emb|CAD64647.1| valine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254046036|gb|ACT62829.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 889

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/346 (22%), Positives = 133/346 (38%), Gaps = 33/346 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L   E         +R  +        + D  +SR+   W
Sbjct: 363 VEARLSTQWFVKMKPLAEQALKNQEGDDAVDFIPKRFEDAFKQWMENIHDWVISRQ-LWW 421

Query: 217 GIKIP-----------------DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +IP                  DP+       ++  W  +     +T G+ +       
Sbjct: 422 GHRIPAWYNKTTGETYVGVDGPKDPENWEQDPDVLDTWFSSALWPFSTMGWPNTDAEDFK 481

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DIL F    + + +   +   P    +         G K+SKSLGN I
Sbjct: 482 RYFPTNTLVTGYDILPFWVSRMIFQSLEFTGRRPFKNVLLHGLIRDEHGVKMSKSLGNGI 541

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G DALR+FL      G+D  +    +    N    N I N  SR V M L 
Sbjct: 542 DPMDVIEKYGADALRWFLSNGSTAGQDVRFSYTKMDAAWN--FINKIWN-ASRYVIMNLG 598

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
             D   +P    +T +D+ ILS  +  ++++           A   + + +     D Y 
Sbjct: 599 TMDKPELPAASDWTLADKWILSRLNATVKQVTTTFDKFDFGEAGRALYNFIWNDFCDWYI 658

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  K   L   +    +    V   V+ Q+  LL   +P +  KI+
Sbjct: 659 EMSK-EVLTGDDAQAKANTQNVLAYVLDQILRLLHPIMPFVTEKIW 703



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 98  VEAKLREQGISRYDLGREKFIQQVWDWKDEYASIIKQQWAKMGLSLDYSRERFTMDDGLS 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           D  + ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 158 DAVKKVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDD 200


>gi|116617448|ref|YP_817819.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096295|gb|ABJ61446.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 894

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 132/363 (36%), Gaps = 14/363 (3%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +       S     ++   E                V+++            ++    
Sbjct: 356 HSERTGVQVESRLSTQWFVKMEPLAKQILDMQKNDDEKVEFVPARFEDTFSRWMENIRDW 415

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
                  +   I    +     +  L   + +     W      DP  ++  W  +    
Sbjct: 416 VISRQLWWGHQIPAWYKNKGTDQEELYVGTEAPAGDGW----ERDPD-VLDTWFSSALWP 470

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
            +T G+ +  DG  A+++P +  V G DI+ F    + +     +   P    +      
Sbjct: 471 FSTMGWPEKLDGDFARYYPTNTLVTGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIR 530

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN +DP++VIE+ G DALR+FLV     G+D  +  + +    N    N
Sbjct: 531 DGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLVTGSTPGQDLRFTYEKMDSAWN--FIN 588

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N     +  + +D    +P     T +D+ ILS  + V+  +  N        A  +
Sbjct: 589 KIWNASRYVIMNLDEDTPSTLPDMSQLTLADQWILSRLNTVVTNVTRNFDKFEFGEAGRE 648

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + + +     D Y +  K  E    + D+A  V      V+ Q   LLQ  +P +   I+
Sbjct: 649 LYNFIWSDFADWYIEMTK--ETLNGDQDKA-PVQQTLAYVLDQTLRLLQPIMPFVTEAIW 705

Query: 475 DIL 477
             +
Sbjct: 706 QEM 708



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 41  EPEPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKV 100

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + ++ +   +     + +S  +D    T ++  + 
Sbjct: 101 EQRLRGEGVSRYDLGREKFVEQVWDWKNEYATTIKQQWGKMGLSLDFDRERFTLDEGLNK 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
               ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 161 AVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIEVIYQDD 202


>gi|306830739|ref|ZP_07463903.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304427086|gb|EFM30194.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 883

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 135/355 (38%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  E      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +D
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNED 587

Query: 373 YDGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +          A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDQASANVDKVVAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|293376478|ref|ZP_06622707.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842048|ref|ZP_08167585.1| valine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644900|gb|EFF62981.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489770|gb|EGC92126.1| valine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 878

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 146/376 (38%), Gaps = 37/376 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + ++   +  +     ER           + D  +SR+   W
Sbjct: 353 VEPYLSTQWFVKMEELAARSVTNQGTDNKVNFVPERFENTFLRWMENIHDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +  + ++  W  +     TT G+ D       
Sbjct: 412 GHQIPAWYHKETGEMYVGEEAPADIENWNQDEDVLDTWFSSALWPFTTLGWPDVECEDFK 471

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 472 AYFPTDTLVTGYDIIFFWVSRMIFQSLEFTDERPFKNVLIHGLVRDAEGRKMSKSLGNGV 531

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE+ G D+LRYFL    A G+D  Y ++ ++   N    N I N  SR V M L+
Sbjct: 532 DPMDVIEKYGADSLRYFLTTNSAPGQDLRYIEEKVESTWN--FINKIWN-ASRFVIMNLE 588

Query: 372 DY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
               + +         +D+ IL   +  ++ I  N            + + + E   + Y
Sbjct: 589 GMTVEDVCLQAATLNVADKWILGRLNETIEAINYNADKFEFGEVGRHLYNFIWEDFCNWY 648

Query: 428 FDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K P  L+  + +   +   V   V+  +  LL  F+P +  +I+ ++   +   C 
Sbjct: 649 IEMAKLP--LQGEDEEAKRSTRMVLTYVLESIVKLLHPFMPFVTEEIYQMI-TRENTACA 705

Query: 487 QSLDQRLKPGFMLHKT 502
            +    +KP F   KT
Sbjct: 706 VAAWPVVKPEFNDAKT 721



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  SNKPKYTIVIPPPNVTGKLHLGHAWDTSLQDIIIRMKRMQGYDALWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     + ++ +   R   + + +S D      T ++   
Sbjct: 94  VDARLKEQGLSRYDIGREAFLEKAWEWKEEYAGFIRQQWEKMGLSLDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++ +KG IY+G     +        +D EV  
Sbjct: 154 KAVRRVFVQLYEKGLIYRGERIINWDPAARTALSDIEVIH 193


>gi|167751126|ref|ZP_02423253.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702]
 gi|167655841|gb|EDR99970.1| hypothetical protein EUBSIR_02111 [Eubacterium siraeum DSM 15702]
          Length = 882

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/388 (20%), Positives = 147/388 (37%), Gaps = 42/388 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                          V+      +F  +       +   +S     +P    N  + +++
Sbjct: 339 PHKHKVGCCQRCGTTVEPRASYQWFVSMKQLAQPAIDVVKSGELRYIPQRFENGYLYWME 398

Query: 202 SGLKDLSLSRKTFDWGIKI-----------------------------PDDPQYIMYVWI 232
             ++D  +SR+   WG +I                                 +  +  W 
Sbjct: 399 -NIRDWCISRQ-LWWGHRIPAYYCQNKECGHTEITLDGIDTCPKCGAPMKQDEDTLDTWF 456

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +        F+P +  V G DI+ F    + +     +   P    +
Sbjct: 457 SSALWPFSTLGWPEKTA-DLEYFYPTNTLVTGYDIIPFWVARMIFSGLEHTGQKPFKDVL 515

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                    G K+SKSLGN +DP+EVI++ G DALR  LV   A G D  + +  +    
Sbjct: 516 IHGLVRDELGRKMSKSLGNGVDPLEVIDKYGADALRLTLVTGNAPGNDMRWTETKVTNSR 575

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN + N  SR + M L +       P      D+ ILS+ + +++ +  N+ +  +
Sbjct: 576 N--FANKLWN-ASRYILMNLPEDMQGAVLPENLPIEDKWILSLYNDLIKNVTSNLDSYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A+  +   + +   D Y +  KP   +     RA+    V V V++ +  LL  F+P 
Sbjct: 633 GVAVQNLFDFIWDVYCDWYIELTKPRIAEGGETARAA--QNVLVYVMQGILKLLHPFMPF 690

Query: 469 LANKIFDILF-VADENRCFQSLDQRLKP 495
           +  +I+  +  VAD++   +S+     P
Sbjct: 691 ITEEIWQSMPIVADKDNNPESIMISAWP 718



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+ G   L+  GTD          
Sbjct: 35  KKKPYTIVIPPPNITGQLHMGHALDNTLQDILIRYKRMQGYSALWLPGTDHASIATEAKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            NA                      +              L  S  +D    T ++    
Sbjct: 95  VNAMKEEGLTKDDVGRDGFLERAWEWKKVYGGRIVQQLKKLGSSCDWDRERFTLDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  + +KG IY G     +    +   +D E        ++   + P+
Sbjct: 155 AVQKVFIDLYNKGLIYHGERIINWCPNCKTSISDIECEYEEQDSFFWHINYPL 207


>gi|189425595|ref|YP_001952772.1| valyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421854|gb|ACD96252.1| valyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 897

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/404 (21%), Positives = 145/404 (35%), Gaps = 42/404 (10%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +     G            V+      ++ ++    ++ L   +     ILP +  N 
Sbjct: 334 LLEKIDDHGLSVGGCYRCKTVVEPYLSLQWYVKVGPLAERALQAVKDGRTRILPKQWENT 393

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI--------------PDDPQ--------------YI 227
              +++  ++D  +SR+   WG +I               +DP                +
Sbjct: 394 YYDWME-NIRDWCISRQ-IWWGHRIPAWFCDHCGKITVSMEDPTSCSQCGSDELRQETDV 451

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ D     K +F+P    V G DIL F    +          +P
Sbjct: 452 LDTWFSSALWPFSTMGWPDQTAELK-RFYPTATLVTGFDILFFWVARMMMMGLHFMDEVP 510

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                         G+K+SKS GNVIDP+ VI++ G DA R+ L    A G+D    ++ 
Sbjct: 511 FKDVYIHALVRDAHGQKMSKSKGNVIDPLTVIDQYGTDAFRFTLAAFAAQGRDIKLAEER 570

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +      +  N + N  +R   M L+ +  D ++      TESDE IL   +   +   +
Sbjct: 571 I--SGYRNFCNKVWN-AARFTMMNLEGFEPDQLVFEDLRLTESDEWILHRLNETARATNQ 627

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +     + A   +         D Y +  K  EL   +P R  T  YV   V+  L  L
Sbjct: 628 ALDEYRFNEAAMTLYQFTWSEFCDWYLELSKQ-ELYGDDPLRRRTTQYVLWSVLEHLLRL 686

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           L   +P +  +I+  L   D      S      P  ML     P
Sbjct: 687 LHPIMPFITEEIWQTLPKGDRCNLRGS-GGDWPPSIMLAPYPQP 729



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 51/174 (29%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA    + D+L R+ R+ G  VL+  GTD  G       +
Sbjct: 37  RRPYSIVIPPPNVTGALHMGHALNNTLQDILCRWKRMTGHSVLWMPGTDHAGIATQNVVE 96

Query: 64  NAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                          Q     + +    D   + F  T +    
Sbjct: 97  RQLAAEGKDRHDLGREAFIERVWQWKAESGGQIIGQLKRLGASCDWERERF--TMDAGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ + G IY+      +  R     +D EV       +      PV
Sbjct: 155 KAVRTVFVKLYEDGLIYRDNRLINWCPRCHTALSDIEVEHEEKKGHLWHIRYPV 208


>gi|169824504|ref|YP_001692115.1| valyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831309|dbj|BAG08225.1| valyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 872

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/369 (21%), Positives = 150/369 (40%), Gaps = 34/369 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H+ V+ +  + +F ++       L  Y+      +P  R  +V       ++D  
Sbjct: 344 HCERCHSTVEPLISKQWFVKMDKLAKLALDAYKKEEIRFIPK-RFEKVYVNWLENIRDWC 402

Query: 209 LSRKTFDWGIKI----------------PDDPQY------IMYVWIDALTNYLTTTGYLD 246
           +SR+   WG ++                  DPQ        +  W  +     +T G+ +
Sbjct: 403 ISRQ-LWWGHRLPVYYHNETGEVVVARENPDPQKYTQDPDTLDTWFSSALWPFSTLGWPN 461

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  K  F+P ++ V G DI+ F    + + +      +P      +      +G K+S
Sbjct: 462 ETEDLK-YFFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPFKDVYLTGLVKDSQGRKMS 520

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN IDPIEVI++ G DALR+ L+     G D  +  + ++   N +  N + N  SR
Sbjct: 521 KSLGNGIDPIEVIDQYGADALRFALITGNTPGNDSRFYMEKVEA--NRNFCNKLWN-ASR 577

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-- 422
            V M ++D +            D+ I+S  + V+ E+  N+    I  A  ++       
Sbjct: 578 FVFMNVED-NVKNIDEVELQIEDKWIISSLNNVIDEVSTNLNKYEIGIAAEKIYDFTWNV 636

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  KP  L   N     + + V +  +  +  LL  F+P +  +I+  L   ++
Sbjct: 637 FCDWYIELVKP-RLYGDNAKLKDSAISVLIYTLTNVIKLLHPFMPYITEEIYSYLPNKND 695

Query: 483 NRCFQSLDQ 491
               ++  +
Sbjct: 696 MLINETWPK 704



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I           H+GHA    I D+L R +R+DG   L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNVTGNLHLGHALNNTIQDILIRKNRMDGYSALWVPGTDHASIATEAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
             N                       +  +   N ++    L +S D      T +    
Sbjct: 93  VVNKLKEEGKSKESLGRDGFLEASWDWTREYGGNIKNQLKKLGVSCDWSREAFTLDDNLT 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +    ++ K+ +   IY+G     +        +D EV    +  ++  
Sbjct: 153 EAVEEVFIKMYNDDLIYQGDRIVNWCPNCHTAISDIEVVHEDESGHFWN 201


>gi|253580599|ref|ZP_04857863.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847970|gb|EES75936.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 884

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 148/383 (38%), Gaps = 40/383 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M +  +F ++       +   +      +P  R ++     
Sbjct: 338 VPHNHSVGTHDRCGTTVEPMIKPQWFVKMDEMAKAAIKALDDGDLKFVPS-RFDKTYLHW 396

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
              ++D  +SR+ +                             G       +  +  W  
Sbjct: 397 LENIRDWCISRQLWWGHRIPAYYCDECGEVVVAREMPEKCPKCGCTHLHQDEDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        F+P D+ V G DI+ F    + + A   +  +P    + 
Sbjct: 457 SALWPFSTLGWPEKTP-ELEYFYPTDVLVTGYDIIFFWVIRMVFSALEQTDQVPFHHVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLMTGNAPGNDMRFYWEKVEASRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLI 410
              AN I N  SR + M L+      P         D+ ILS  + V++E  ENM+   +
Sbjct: 576 --FANKIWN-ASRFIMMNLEGKTVTEPENLNDLCAEDKWILSHLNTVIREATENMEKYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             A+ +V   + +   D Y +  K   W+  + +P  A+  L+     + +   LL  ++
Sbjct: 633 GIAVQKVYDFLWDELCDWYIEMAKVRLWK-AEEDPKAANDALWTLRTALTEGLKLLHPYM 691

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +  +I+  L   +E+      
Sbjct: 692 PFITEEIYCTLLPEEESIMISEW 714



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           +++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD          
Sbjct: 35  DKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTDHAAIATEVKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  ++    T ++    
Sbjct: 95  IDKLKKEGIDKHDIGREEFLKHAWAWKEEYGGKIINQLKKLGASADWERERFTMDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             + ++ K+ +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 155 AVQEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPIVGEE 211


>gi|310657932|ref|YP_003935653.1| valyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824710|emb|CBH20748.1| valyl-tRNA synthetase [Clostridium sticklandii]
          Length = 884

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 148/382 (38%), Gaps = 43/382 (11%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE            +  +    HN V+ +    +F ++           E+    ++P  
Sbjct: 328 DEMGLLVKVKEHNHNVGHCYRCHNVVEPLVSRQWFVKMKDLAAPATLALETGDLKLVPD- 386

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------DD 223
           R ++      + ++D  +SR+   WG +IP                              
Sbjct: 387 RFDKTYLNWLNNIRDWCISRQ-LWWGHRIPAYYCQDCDEIMVADSKPHICPKCKSNNIKQ 445

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+         KF+P  + V G DI+ F    + + A  + 
Sbjct: 446 DEDVLDTWFSSALWPFSTLGWPQQTA-EMLKFYPTSVLVTGYDIIFFWVIRMVFSALYVL 504

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P             +G K+SKSLGN IDP+E+I+  G DALR+ L    + G D  +
Sbjct: 505 DEVPFSHVFIHGLVRDSEGRKMSKSLGNGIDPLEIIDTYGADALRFTLATGNSPGNDMRF 564

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRV 397
             + ++   N   AN I N  SR + M L++            E+    D+ I+S  + +
Sbjct: 565 YMERVEASRN--FANKIWN-ASRFIFMNLENSQKKEFKREDVNEALELSDKWIISRVNSL 621

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+ ENM    +  A+++V         D Y +  K   L   +     + +Y    V+
Sbjct: 622 SKEMTENMDKFELGIAVSKVYDFAWSEFCDWYIELVKQ-RLYSEDSISKDSAVYTLTYVL 680

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
            ++  LL  F+P +  +I+  +
Sbjct: 681 EKILKLLHPFMPFITEEIWSYM 702



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 24/166 (14%)

Query: 1   MK-EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK  +    I         Q H+GHA +  + D+L R+ R+ G + L+  GTD       
Sbjct: 31  MKAGQPSYSIVLPPPNITGQLHMGHALDHTLQDILIRWKRMQGFNTLWQPGTDHASIATE 90

Query: 60  KAAQNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                                          + F  +     + + D  D   + F  T 
Sbjct: 91  VKVVERIKEQEGLSKEELGRDEFLKRAWVWKEEFGGKIVEQMKKLGDSCDWERERF--TM 148

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++  +      + ++ + G IY+G     + +  +   +D EV   
Sbjct: 149 DEGCNKAVTEFFVRLYNDGYIYRGNRIINWCVDCKTSLSDAEVEHD 194


>gi|310830393|ref|YP_003965494.1| Valyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309249860|gb|ADO59426.1| Valyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 888

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 134/366 (36%), Gaps = 39/366 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +     K +   ++        +R           ++D  +SR+   W
Sbjct: 360 VEPYLSTQWFVEMKPLAAKAIEAQKAGKGVNFVPDRFERTYLHWIENVRDWCISRQ-LWW 418

Query: 217 G--IKIPDD--------------------------PQYIMYVWIDALTNYLTTTGYLDNP 248
           G  I    D                           + ++  W  +     +T G+ +  
Sbjct: 419 GHRIPAWYDQESGEVIVSAEDPTTLPEYAGRKLIQDEDVLDTWFSSALWPFSTLGWPEQT 478

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +  K +++P ++ V G DI+ F    + + A   +  +P    +         G K+SKS
Sbjct: 479 EDLK-RYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKS 537

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP++VI++ G DA+RY +      G+D  +  + +++  N   AN I N  SR  
Sbjct: 538 LGNGVDPLDVIDQYGTDAMRYMISTSSTPGQDLRFRWERVEQARN--FANKIWN-ASRFA 594

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+          G  +  D  IL   +   ++I   +           + + + +  
Sbjct: 595 LMNLEGITASDINIEGNLSTVDRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDL 654

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L   N +       V   V+ +   ++  F+P ++ +I+  L    E 
Sbjct: 655 CDWYIEFAK-LSLYGENAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGET 713

Query: 484 RCFQSL 489
               + 
Sbjct: 714 ITLAAW 719



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKI 58
           E E   I           HIGHA +  + D++ R  R+ G D L+  G D  G     K+
Sbjct: 42  EAEPFTIVIPPPNVTGMLHIGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKV 101

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +  +  G+T               + D    N  +  + +  S D      T ++    
Sbjct: 102 EQKLREEGLTRYDLGREKFLEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSK 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ K+  KG IY+G     +        +D EV  
Sbjct: 162 AVREVFVKLYQKGLIYRGKRIINWDPAARTALSDIEVEY 200


>gi|320334772|ref|YP_004171483.1| Valyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756061|gb|ADV67818.1| Valyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 884

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/359 (23%), Positives = 149/359 (41%), Gaps = 50/359 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F R+    D +L+  +     ++P  R  +V       ++D ++SR+   
Sbjct: 370 PVEPIISTQWFVRMKPMADAVLAGLDRGDMQLVPD-RYTKVNRDWLENIRDWNISRQ-LW 427

Query: 216 WGIKIP----------------------DDPQY----------IMYVWIDALTNYLTTTG 243
           WG +IP                       DP+Y          +   W  +     +T G
Sbjct: 428 WGHRIPAWYDDAGNVYVPDLENPDLDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 487

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D       KF+P  + V G DIL F    +   A+  +   P    +    ++  KG+
Sbjct: 488 WPDEASEDYRKFYPTQVLVTGYDILFFWVARMQMAAYHFTGRAPFSTIMLHGLYLDAKGQ 547

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP+E+ E+ GVDA R+        G+D  +D    ++    + AN + N 
Sbjct: 548 KMSKSKGNGVDPLELFEQYGVDAARFAFTYLSTGGQDIKHDPRRFEQ--GRNFANKLWN- 604

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M L+      P  G  T +D  I S  +  ++E+  ++    I  A+    +  
Sbjct: 605 AARFAFMNLEG----EPEAGEATLADRWIRSRLNDTVREVTAHLDAFDIGAAIRTAYAFT 660

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +   D Y +A KP  L+     R +       +V+  +  LL  F+P + ++I++ L 
Sbjct: 661 WDEFCDWYIEAAKP-ALR----ARNAATRATLKDVLEGILKLLHPFMPFITSEIYEALN 714



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ R+ G + L+  GTD  G      
Sbjct: 42  SSKPPFTIVIPPPNVTGNLHLGHALDNTLIDTLIRYKRMAGFEALYLPGTDHAGISTQVV 101

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++     +    L +S D      T ++   
Sbjct: 102 VERQLKVEGKTRFDLGRDAFLERVWAWKQESGGTILNQLQRLGVSADWTRERFTMDEGLS 161

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + ++  +G  Y+G     +    +   +D E+
Sbjct: 162 RAVRHEFVRLYHEGLAYRGERMVNWDPASQTTLSDLEI 199


>gi|325295640|ref|YP_004282154.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066088|gb|ADY74095.1| Valyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 875

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/383 (21%), Positives = 151/383 (39%), Gaps = 42/383 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++E +    E +  + G  Y      V+    + +F +     ++ +   ++     +P 
Sbjct: 327 KEEGFLEKVESHVHSVGHCYR-CKTVVEPYLSDQWFVKTKPLAERAIKAVKTGEIRFVPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
           +  N    ++   ++D  +SR+   WG +IP                             
Sbjct: 386 QWENTFFDWM-YNIRDWCISRQ-IWWGHRIPAWYCKDCGHINVSEEVPEKCENCGSTNLY 443

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +      T G+    D  K  F+P DL V G DI+ F    +    +  
Sbjct: 444 QDEDVLDTWFSSAMWPFGTLGWPKRTDDLKV-FYPTDLLVTGFDIIFFWVSRMMMMGYYF 502

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P             KG+K+SK+ GNVIDP+E++E+ G D LR+ L    A G+D  
Sbjct: 503 MKEKPFSDVYVHALVRDEKGQKMSKTKGNVIDPLEMVEKYGADTLRFTLAALAAQGRDIR 562

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             +  ++       AN I N+     S +    +  +    ++   D+ ILS  S+ ++ 
Sbjct: 563 LSEKIIEG--YRHFANKIWNIARFIFSALE---NVEMKEAVSYAPEDKWILSKLSKTVEI 617

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + + ++N   + A   +   +     D Y +  K    K T  ++  TVL+V + V+R  
Sbjct: 618 VDKELENYRFNDAAKAIYQFLWSEFADWYIEFSKQRVYKGTEEEK-RTVLHVLLTVLRDA 676

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             LL   +P L  +I+  L   D
Sbjct: 677 MKLLHPIMPFLTEEIYQKLPNKD 699



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           E+ K  +           H+GHA    + D++ R+ R+ G +V +  GTD  G       
Sbjct: 36  EKPKFSVVLPPPNVTGVLHVGHALNSTLQDIICRWKRMKGFEVCWIPGTDHAGIATQWVV 95

Query: 60  ----------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K  +  +     + +    D S + F  T ++  
Sbjct: 96  ERELAKEGLTRHDIGREEFLERVWKWKDQYGSRIINQLKKLGTSCDWSRERF--TMDEGF 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               +  +  +  +G IY+G     +  R     +D EV    +         P+
Sbjct: 154 SKAVKKAFVTLYKEGLIYRGKRLINWCPRCHTALSDLEVEHEEEQGNLWYIKYPI 208


>gi|291544503|emb|CBL17612.1| valyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 873

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 149/405 (36%), Gaps = 40/405 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L    Y    E +    G  Y      V+      +F ++    
Sbjct: 311 YAGMDRYEARKAIVADLEAGGYLIQVEPHAHNVGTCYRCGTT-VEPRVSLQWFVKMEELA 369

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +    S     +P  R ++        ++D  +SR+ +                   
Sbjct: 370 KPAIDVVRSGKIKFVPE-RFDKNYFNWMEDIRDWCISRQLWWGHQIPAFYCDDCGELVVT 428

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G  +  DP   +  W  +     +T G+ D+ +     F+P    V G D
Sbjct: 429 KEDTAVCPKCGKPMRQDPD-TLDTWFSSALWPFSTLGWPDHTE-ELDYFYPTSTLVTGYD 486

Query: 267 ILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F               +P    +        +G K+SKSLGN IDP+EVI++ G DA
Sbjct: 487 IITFWVSRMIVAGMAHMKEIPFDTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDQYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L    A G D  Y  + +K   N   AN + N  SR + M L +   +   P + T
Sbjct: 547 LRFMLATGNAPGNDMRYMDEKVKASRN--FANKLWN-ASRFIMMNLPEDYELTGLPESLT 603

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D+ IL+  + + + + EN+    +  A++++   + +   D Y +  KP  +      
Sbjct: 604 IEDKWILTRFNDLCKAVTENLDKFELGIAVSKLYDFIWDVYCDWYIELTKPRIMAGGATK 663

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
              +   V V V++ +  LL  F+P +  +I+  L         +
Sbjct: 664 E--SAQAVLVWVMQGMLKLLHPFMPFITEEIWQALTGGKTPIMLE 706



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 34  RTKNPYTIVIPPPNITGQLHMGHALDETLQDILIRYRRMQGYCTLWLPGTDHASIATEAK 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
              A                      + +Q      +    L  S D      T ++  +
Sbjct: 94  IVEAMRKEGITKDDIGRDGFLKRAWAWKEQYGGRIVEQLKKLGSSCDWERERFTMDEGCN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ +  ++G IY+G     +        ++ EV       ++     P+
Sbjct: 154 RAVREVFVRYYEEGLIYRGERIINWCPHCHTSISNAEVEFEEQDGFFWHLRYPL 207


>gi|227877308|ref|ZP_03995381.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256848756|ref|ZP_05554190.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|227863164|gb|EEJ70610.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256714295|gb|EEU29282.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 879

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 151/401 (37%), Gaps = 37/401 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++   +    L++E Y    E    + G    +    V+    + +F ++    
Sbjct: 310 YAGMDRFECREALVKDLKEEGYLIKIEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           DK+L   ++  +     ER  + +      + D  +SR+   WG +IP            
Sbjct: 369 DKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQ-LWWGHRIPAWYNKKTGETYV 427

Query: 222 ------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                        DP  ++  W  +     +T G+ D       +++P +  V G DI+ 
Sbjct: 428 GEETPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNALVTGYDIIF 486

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    + + +   +   P    V        +G K+SKSLGN +DP++V+++ G DALR+
Sbjct: 487 FWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRW 546

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+   A G+D  YD   L    N    N I N     +  +  D     +P    F  S
Sbjct: 547 FLLNGTAPGQDTRYDPKKLSAAWN--FINKIWNASRFVIMNLPADAKPAHMPDASKFDLS 604

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D  I    +  + E+           A  +  + +     D Y +  K   L   + +  
Sbjct: 605 DRWIFDRLNHTVSEVTRLFDEYQFGEAGREAYNFIWNDFCDWYIEISKV-ALNGDDEELK 663

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +      + ++ Q+  LL   +P +  K++  L +  E + 
Sbjct: 664 ARKQENLIWILDQILRLLHPIMPFVTEKLW--LSMPHEGKS 702



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|256842870|ref|ZP_05548358.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262045836|ref|ZP_06018800.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381704|ref|ZP_06627685.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977611|ref|ZP_07789358.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256614290|gb|EEU19491.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260573795|gb|EEX30351.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921751|gb|EFD98772.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895350|gb|EFQ44417.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 879

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 151/401 (37%), Gaps = 37/401 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++   +    L++E Y    E    + G    +    V+    + +F ++    
Sbjct: 310 YAGMDRFECREALVKDLKEEGYLIKIEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           DK+L   ++  +     ER  + +      + D  +SR+   WG +IP            
Sbjct: 369 DKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQ-LWWGHRIPAWYNKKTGETYV 427

Query: 222 ------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                        DP  ++  W  +     +T G+ D       +++P +  V G DI+ 
Sbjct: 428 GEETPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDFKRYFPTNALVTGYDIIF 486

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    + + +   +   P    V        +G K+SKSLGN +DP++V+++ G DALR+
Sbjct: 487 FWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRW 546

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+   A G+D  YD   L    N    N I N     +  +  D     +P    F  S
Sbjct: 547 FLLNGTAPGQDTRYDPKKLSAAWN--FINKIWNASRFVIMNLPADAKPAHMPDASKFDLS 604

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D  I    +  + E+           A  +  + +     D Y +  K   L   + +  
Sbjct: 605 DRWIFDRLNHTVSEVTRLFDEYQFGEAGREAYNFIWNDFCDWYIEISKV-ALNGDDEELK 663

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +      + ++ Q+  LL   +P +  K++  L +  E + 
Sbjct: 664 ARKQENLIWILDQILRLLHPIMPFVTEKLW--LSMPHEGKS 702



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|224476754|ref|YP_002634360.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783557|sp|B9DND4|SYV_STACT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|222421361|emb|CAL28175.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 876

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 133/364 (36%), Gaps = 34/364 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +     + L   ++        ER     +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVNMEPLAKQALDNQKTDNRINFVPERFEHTFNQWMENIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 410 GHQIPAWYHKETGEIYVGETEPEDAENWVQDEDVLDTWFSSGLWPFSTLGWPDVESEDYQ 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNALVTGYDIIFFWVARMIFQGLEFTGERPFDDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI E G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I +
Sbjct: 530 DPMDVINEYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSIMNIGE 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           ++           + +D+ IL+  +  ++ + +             + + + +   D Y 
Sbjct: 588 EFKFEDIDLSKNLSLADKWILTRLNETIKTVTDLSDRYEFGEVGRALYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K P  +   +  +      V   V+ +   +L  ++P +  +I+  L    E     
Sbjct: 648 EMSKIP--MNGEDEAQKQVTRSVLSYVLERTMRMLHPYMPFVTEEIWQNLPHVGETIVTS 705

Query: 488 SLDQ 491
           +  +
Sbjct: 706 AWPE 709



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 32  KSKETYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDTLYLPGMDHAGIATQAK 91

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            +                        + D+ +   R       L + YD    T ++   
Sbjct: 92  VEAKLNEQGISRHDIGREKFLEEVWSWKDEYASFIRQQWAKLGLGLDYDRERFTLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G     +        +D EV  
Sbjct: 152 KAVRKVFVDMYNKGLIYRGERIINWDPEARTALSDIEVVH 191


>gi|291521943|emb|CBK80236.1| valyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 883

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/414 (19%), Positives = 158/414 (38%), Gaps = 43/414 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L  + Y    E    A G  ++     V+ M +  +F  +    
Sbjct: 310 YAGLDRYEARKQIVADLDAQGYLCGIEDITHAVGT-HDRCKTTVEPMIKPQWFVAMEEMA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              ++  ++     +P       + +++  ++D  +SR+ +                   
Sbjct: 369 KPAINAIKTGELKFVPESYSKTYLHWLE-NIRDWCISRQLWWGHRIPAYYCDECGEIVVS 427

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G          +  W  +     +T G+ +  +     F+P D+ V G D
Sbjct: 428 KGMPSVCPKCGCTHFTQDPDTLDTWFSSALWPFSTLGWPEKTE-ELDYFYPTDVLVTGYD 486

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + +  +  +   P    +        +G K+SKSLGN IDP+EVI++ G DA
Sbjct: 487 IIFFWVIRMVFSGYEQTGKAPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADA 546

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-----KDYDGMIPT 379
           LR  L+   A G D  +  + ++   N   AN + N  SR + M       K       +
Sbjct: 547 LRLTLITGNAPGNDMRFYWERVESSRN--FANKVWN-ASRFMLMNFEQAAEKGISIDGVS 603

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
               T++D+ ILS  +R+ +++ EN+    +  A++++   + E   D Y +  KP    
Sbjct: 604 LADLTQADKWILSKMNRLTKDVTENIDKYELGIAVSKIYDFIWEEFCDWYIEMVKPRLYN 663

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +  +A+ +      V+     LL  ++P +  +IF  +   +E+       +
Sbjct: 664 DEDKTKAAALW-TLKTVLINALKLLHPYMPFITEEIFCNVQNEEESIMISKWPE 716



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         Q H+GHA +  + D+L R  R+ G + L+  GTD         
Sbjct: 32  RSKKPFTIVMPPPNITGQLHMGHALDNTMQDILIRCKRMQGYEALWQPGTDHASIATEVK 91

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + ++           L  S  +D    T ++   
Sbjct: 92  IINKLKEEGISKEELGREGFLEKAWEWKEEYGGRIIKQLKKLGSSADWDRERFTMDEGCS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                ++ K+ +KG IYKG     +    +   +D EV       ++     PV
Sbjct: 152 KAVEEVFCKLHEKGYIYKGSRIINWCPVCKTSISDAEVEHVEQVGHFWHIKYPV 205


>gi|168485679|ref|ZP_02710187.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571212|gb|EDT91740.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 883

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 133/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNEAGEIYVGEEAPAGDGWKQDEDVLDTWFSSALWPFSTMGWPNTETTDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPNSTLVTGYDIIPFWVSRMIFQGIEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 ------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                 D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVVHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|228478388|ref|ZP_04062996.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250067|gb|EEK09337.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 883

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDAARENVTKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +I+  +
Sbjct: 648 FADWYIELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|251798405|ref|YP_003013136.1| valyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546031|gb|ACT03050.1| valyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 883

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 139/366 (37%), Gaps = 39/366 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F  +    ++ +   +S        +R  ++       ++D  +SR+   W
Sbjct: 355 VEPYLSTQWFVAMKPLAERAIEAQKSGNGVNFVPDRFEKIYLNWIENVRDWCISRQ-LWW 413

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +     +T G+ +  
Sbjct: 414 GHRIPAWYCESCGEMHVAREDVTACAACGSASLRQDEDVLDTWFSSGLWPFSTLGWPEET 473

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +    +++P D+ V G DI+ F    + + A   +  +P    +        +G K+SKS
Sbjct: 474 E-DFKRYYPTDVLVTGYDIVYFWVARMIFTALEFTDQIPFKDVLMHGLVRDAEGRKMSKS 532

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN +DP++VIE  G DA+RY +      G+D  +  + +++  N   AN I N  SR  
Sbjct: 533 LGNGVDPLDVIENYGADAMRYMISTGSTPGQDLRFRIEKVEQARN--FANKIWN-ASRFA 589

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M L+ +             ++  IL   +  ++E    + +         + + + +  
Sbjct: 590 LMNLEGFTSSDIDIKSNLGTAERWILHRLNETVREATRLIDSYEFGETGRILYNFIWDDL 649

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   L  T+         V   V+ +   L+  F+P ++ +I+  L    E+
Sbjct: 650 CDWYIEFAK-LNLYGTDEQAKRATQSVLAYVLDRTQRLIHPFMPYISEEIWQHLPHEGES 708

Query: 484 RCFQSL 489
               + 
Sbjct: 709 ITLAAW 714



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +   I           HIGHA +  + D++ R  R+ G D L+  GTD  G       
Sbjct: 37  DAKPFTIVIPPPNVTGMLHIGHALDFTLQDIIIRTKRMQGFDTLWLPGTDHAGIATQTKV 96

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + +  +   R+    + +S D      T ++    
Sbjct: 97  EQKLREQGLSRYDLGREKFLEQVWDWKELYAGTIREQWGKMGLSLDYSRERFTLDEGLSK 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +        +D EV  
Sbjct: 157 AVREVFVRLHEKGLIYRGKKIINWDPAARTALSDIEVEY 195


>gi|291549332|emb|CBL25594.1| valyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 881

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 159/412 (38%), Gaps = 42/412 (10%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE  Y    V        ++     V+ + ++ +F ++       ++  ++     +P  
Sbjct: 328 DEQGYLVKVVPHMHAVGTHDRCGTTVEPLIKQQWFVKMDELAKPAINALKTGELRFVPE- 386

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD---------------------------WGIKIPDDP 224
           R +++       +KD  +SR+ +                             G       
Sbjct: 387 RFDKIYLHWLENIKDWCISRQIWWGHRIPAYYCDECGEFVVAKEAPEKCPHCGCTHFTQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           +  +  W  +     +T G+ +  +     F+P D+ V G DI+ F    + +  +  + 
Sbjct: 447 EDTLDTWFSSALWPFSTLGWPEKTE-DLDYFYPTDVLVTGYDIIFFWVIRMVFSGYEHTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +        +G K+SKSLGN IDP+E+I++ G DALR  L+   A G D  + 
Sbjct: 506 KAPFNTVLIHGLVRDSQGRKMSKSLGNGIDPLEIIDKYGADALRLTLITGNAPGNDMRFY 565

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + ++   N   AN + N  SR + M ++      P       +D  ILS  + + +E+ 
Sbjct: 566 NERVEASRN--FANKVWN-ASRFILMNMEKNVVEEPEDFLLKPADRWILSKVNSLTKEMT 622

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLA 459
           ENM    +  A+ +V   + +   D Y +  K      + +   A+  L+V   V+ Q  
Sbjct: 623 ENMDKFELGIAVQKVHDFIWDEFCDWYVEIAKYRIYHAEEDSQSANCALWVLKTVLGQAL 682

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSL-----DQRLKPGFMLHKTFDPI 506
            LL  F+P +  +I+  L   +E+    S      D +      + +    I
Sbjct: 683 KLLHPFMPFITEEIYGALVPEEESLMMSSWPIYREDWKFPYATEVIEHVKAI 734



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 20/175 (11%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +R K   +T +  PN   + H+GHA +  + D+L R+ R++G + L+  GTD        
Sbjct: 33  DRSKKPFTTVMPPPNITGKLHMGHALDNTLQDILIRYKRMEGYNALWIPGTDHAAISTEV 92

Query: 61  AAQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
              N                    T  + ++ +    +    L IS  +D    T ++  
Sbjct: 93  KVTNQLKEEGIDKKELGREGFLERTWQWKEEYAGTIENQLKKLGISCDWDRERFTMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++  + +KG IYKG     +  + +   +D EV        +     P+
Sbjct: 153 SKAVEEVFINLYNKGYIYKGSRIINWCPKCKTSLSDAEVEHEDQDGNFWHIKYPI 207


>gi|169837595|ref|ZP_02870783.1| Methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 257

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 99/239 (41%), Positives = 150/239 (62%), Gaps = 3/239 (1%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +++F+K GL+DLS+SR TFDWGI +  +  +++YVW DALTNYLT  G+  +P+   A  
Sbjct: 1   MVAFIKQGLQDLSISRTTFDWGIPLELEEGHVIYVWFDALTNYLTGAGFAKDPE-EFANV 59

Query: 256 WPADL--HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W      HV+GKDILRFHAI WPA L+SA + LP  + +HG+   +GEK+SKSLGNV++P
Sbjct: 60  WTNGTVNHVVGKDILRFHAIIWPAMLMSAGIKLPDTIAAHGWWTVEGEKMSKSLGNVVNP 119

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E +E+ G+DA RY+L+RE   G+D  Y K  + +R+NADLAN +GNL++R++ M  K +
Sbjct: 120 EEEVEKYGLDAFRYYLMREATFGQDADYSKKAMIQRINADLANDLGNLLNRTIGMQKKYF 179

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           +  +         D  I       L ++ +++ N      L  +   +S +++Y D  K
Sbjct: 180 NSEVVLNETEESFDAEIKEFWENTLADLDKHINNYQFSEGLKDIWKFISRMNKYIDELK 238


>gi|227514511|ref|ZP_03944560.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087068|gb|EEI22380.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 884

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 135/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L+  ++        ER     +     + D  +SR+   W
Sbjct: 359 VESRLSTQWFVKMKPLAERALANQKTDDRVNFIPERFEHTFNQWMENVHDWVISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 418 GHQIPAWYHKETGEMYVGMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 478 RYFPTTTLVTGYDIIFFWVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGI 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++V+E+ GVDALR+FLV     G+D  +    +    N    N I N  SR V M L 
Sbjct: 538 DPMDVVEKYGVDALRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLG 594

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D     +P    +  +D  ILS  +  ++++    +      A   + + +     D Y 
Sbjct: 595 DMPAPQLPDQSKWDLADRWILSRLNTTVKDVTAKFEKFEFGEAGRDLYNFIWNDFCDWYI 654

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K  +L     +       +   V+ Q   L+   +P +  K++  +    ++
Sbjct: 655 EMTK-EKLNNGTDEEKDATKNILGYVLDQTLKLIHPIMPFVTEKLWQAMPHDGQS 708



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 35  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 95  VEARLAKQGVSRYDLGREKFVKQVWDWKDEYAAIIHQQWAKMGISVDYDRERFTLDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+  Y   +  +     +D EV    D
Sbjct: 155 KAVRKVFVDLYNKGLIYRATYIINWDPKARTALSDIEVEHKDD 197


>gi|315651962|ref|ZP_07904964.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485791|gb|EFU76171.1| valine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 880

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/366 (22%), Positives = 147/366 (40%), Gaps = 39/366 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ + +  +F  +S      +   E+     +P       + ++
Sbjct: 337 VPHIHNVGRHDRCKTVVEPLIKPQWFVSMSEMAKPAIRAIETGELKFVPESYSKTYLHWL 396

Query: 201 KSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWI 232
           +  +KD  +SR+   WG +IP                               +  +  W 
Sbjct: 397 E-NIKDWCISRQ-LWWGHQIPAYTCTECGEITVAKEKPDACPKCRCHELIQDEDTLDTWF 454

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ D+       F+P D+ V G DI+ F    + +  +  +   P    +
Sbjct: 455 SSALWPFSTLGWPDDTP-EMKYFYPTDVLVTGYDIIFFWVVRMVFSGYEQTGKSPFKTVL 513

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   
Sbjct: 514 IHGLVRDSEGRKMSKSLGNGIDPLEVIDKYGADALRMMLITGNAPGNDMRFYYEKVESAR 573

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           N   AN I N  +R + M + +             SD+ ILS  ++++ E+  N+    +
Sbjct: 574 N--FANKIWN-AARLIMMNIGESKPEAIDGSKLMLSDKWILSKTNKLINEVSTNLDKFEL 630

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             AL+++     E   D Y +  K   L     D   T L V + V+  +  LL  F+P 
Sbjct: 631 GIALSKIYDFAWEEFCDWYIEMVK-LRLWNKEDDTKDTALAVLIYVLNTILKLLHPFMPF 689

Query: 469 LANKIF 474
           +  +I+
Sbjct: 690 ITEEIY 695



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KDKKPFTIIMPPPNITGQLHMGHALDNTMQDILIRYKRMAGYEALWQPGTDHAAIATEVK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + +       +    L  S  +D    T ++   
Sbjct: 93  VIEKIKAEGKNKHELGREKFLKEAWAWKNDYGTRIINQLQRLGSSADWDRERFTMDEHGQ 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              + ++ K+ +KG IYKG     +    +   +D EV        +     P+   E
Sbjct: 153 RAVKEVFVKLYEKGYIYKGNRIINWCPVCKTSISDAEVEHIETEGNFWHIRYPIAGEE 210


>gi|146318113|ref|YP_001197825.1| valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320294|ref|YP_001200005.1| valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751303|ref|YP_003024444.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753204|ref|YP_003026344.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755027|ref|YP_003028167.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|145688919|gb|ABP89425.1| Valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691100|gb|ABP91605.1| Valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815592|emb|CAZ51175.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817491|emb|CAZ55232.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819449|emb|CAR44947.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557873|gb|ADE30874.1| Valyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
 gi|319757585|gb|ADV69527.1| valyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 883

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTADKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNESGEMYVGEEAPAGDGWVQDEDVLDTWFSSALWPFSTMGWPDENAADFQRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIPFWVSRMIFQGIEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDAARENVAKVAAGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEAEKVMTRSVLLYTLDQILRLLHPIMPFVTEEIFAQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKRH 102
           +                        + D+ +   R+    L +S     D F  T ++  
Sbjct: 95  EERLREQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSLDYQRDRF--TLDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 153 SKAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|55736545|gb|AAV60187.1| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 901

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 133/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 370 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 428

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 429 WGHQIPAWYNAEGEIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 488

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 489 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 548

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 549 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 605

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  ++++ EN        A   + + + + 
Sbjct: 606 LTLDVARENVAKVAAGQAGNVTDRWILHNLNETIRKVTENFDKFEFGVAGHILYNFIWDE 665

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 666 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 719



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 52  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 111

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 112 VEARLAESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 172 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 211


>gi|221231401|ref|YP_002510553.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|220673861|emb|CAR68364.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 883

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYIFMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|260892210|ref|YP_003238307.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864351|gb|ACX51457.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 882

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/389 (21%), Positives = 152/389 (39%), Gaps = 44/389 (11%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             + E        +       V+ M  + +F R+    +  ++  +      +P      
Sbjct: 333 LLEKEEDIVHAVGHCYRCGEVVEPMISKQWFVRMKPLAEPAIAAVKEGRIRFIPERFTKI 392

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP-----------------------------DDPQY 226
            +++V+  +KD  +SR+   WG +IP                              DP  
Sbjct: 393 YLNWVE-NIKDWCISRQ-LWWGHRIPVWHCADCGQSTAARNGLDRCPHCGSSRVEQDPD- 449

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +     +T G+ +     K  F+P  + V G+DI+ F    + +       ++
Sbjct: 450 VLDTWFSSALWPFSTLGWPEATPELKF-FYPTSVLVTGRDIIFFWVARMIFMGLKFMGDV 508

Query: 285 PLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           P  ++VF HG +L   G K+SKSLGN +DP+EVIE  G D+LR+ LV     G D  +  
Sbjct: 509 PF-REVFIHGLVLDALGRKMSKSLGNGVDPLEVIESHGADSLRFMLVTGNTPGNDLRFHF 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIR 402
           + L    N    N + N  SR V M L + + +           D  I+S    V++ + 
Sbjct: 568 ERLDGARN--FINKLWN-ASRFVLMNLDEGESLPRLGEVRLELVDRWIISRLQDVVERVT 624

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             ++   +  A   +   + +   D Y +  K   L  ++P+   T   V   V+     
Sbjct: 625 AYLEEYELGEAARLLYEFIWDEFCDWYIEMAK-LRLYGSDPEARRTAQVVLKSVLGTCLK 683

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSL 489
           LL  F+P +  +++  L         QS 
Sbjct: 684 LLHPFIPFVTEEMWHQLEPESAPLIVQSW 712



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I         + H+GHA +  + DVL R+ R+ G   L+  GTD  G       
Sbjct: 36  SRRPFCIVMPPPNVTGELHMGHALDNTLQDVLIRWRRMQGYTTLWVPGTDHAGIATQARV 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + ++           L  S  +D    T ++    
Sbjct: 96  EAELAKEGLSRHDLGREKFLERVWQWKEKYGNTITMQLRRLGASCDWDRERFTMDEGCSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++ ++ ++G IY+G Y   +    +   +D EV  
Sbjct: 156 AVKEVFIRLYEEGLIYRGDYIVNWCPHCQTVISDIEVEH 194


>gi|330832310|ref|YP_004401135.1| valyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306533|gb|AEB80949.1| valyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 883

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTADKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNESGEMYVGEEAPAGDGWVQDEDVLDTWFSSALWPFSTMGWPDENAADFQRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   + + P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGSQPFKNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDAARENVAKVAAGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEAEKVMTRSVLLYTLDQILRLLHPIMPFVTEEIFAQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKRH 102
           +                        + D+ +   R+    L +S     D F  T ++  
Sbjct: 95  EERLREQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSLDYQRDRF--TLDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 153 SKAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|300173956|ref|YP_003773122.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888335|emb|CBL92303.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 894

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/352 (21%), Positives = 134/352 (38%), Gaps = 36/352 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F +++    + L   ++  E +  +  R E             +  +   
Sbjct: 363 PVESRLSTQWFVKMAPLAKQALDMQKNADEKVEFVPARFEDTFTRWMDNIRDWVISRQLW 422

Query: 216 WGIKI--------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           WG +I                            DP  ++  W  +     +T G+ DN  
Sbjct: 423 WGHQIPAWYKNKGTDQEEIYVGTDEPEGEGWQRDPD-VLDTWFSSALWPFSTMGWPDNKA 481

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              AK++P +  V G DI+ F    + +     +   P    +        +G K+SKSL
Sbjct: 482 DDFAKYYPTNTLVTGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSL 541

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP++VIE+ G DALR+FL      G+D  +  D +    N    N I N     + 
Sbjct: 542 GNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKMDAAWN--FINKIWNASRYVIM 599

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
            + +     +P     + SD+ ILS  +  ++++  N        A  ++ + +     D
Sbjct: 600 NLDEKTPSTLPDLDKLSLSDKWILSRLNTTIEDVTRNFDRFEFGEAGRELYNFIWSDFAD 659

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  K  E    + D+A  V      V+ Q   LLQ  +P +   I+  +
Sbjct: 660 WYIEMTK--ETLNGDADKA-PVQQTLAYVLDQTLRLLQPIMPFVTESIWQEM 708



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA++  + D++ R  ++ G+DVL+  G D  G       
Sbjct: 41  EPEPYAIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAKV 100

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + ++ +   +     + +S  +D    T +   + 
Sbjct: 101 EQRLRAEGISRYDLGREKFVEQVWDWKNEYAATIKKQWGKMGLSLDFDRERFTLDDGLNK 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
               ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 161 AVNKVFIDLYKKGLIYRGEYIINWDPQARTALSDIEVIYQDD 202


>gi|326407749|gb|ADZ64820.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 880

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKNAIANQTTEDAVEFYPPRFNDTFMQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                           ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGEMYVGEEAPEGEGWTQDADVLDTWFSSALWPFSTMGWPDENSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  D +    N    N I N VSR + M  +D 
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYDKMDAAWN--FINKIWN-VSRYILMNAEDV 588

Query: 374 D--------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                      +    A   +D  IL+  +   + + E M       A   + + + +  
Sbjct: 589 SADAVSSALTKVANKTAGNVTDRWILTRLNDTARRVTEQMDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   +   +         V + V+ Q+  LL   +P    +IF+ L
Sbjct: 649 ANWYLELTK-EVMFGEDEAEKDITRAVLLHVLDQVLRLLHPIMPFFTEEIFEKL 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           + E   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  DAEPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + D+ +   ++    + IS D      T ++    
Sbjct: 95  AARLAEDGILPQDLGREKFLDKVWEWKDEYATTIKEQWGKMGISVDYSRERFTLDEGLSQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ +KG IY+G     +  +     +D EV  
Sbjct: 155 AVRKVFVQLYNKGWIYRGEKLINWDPKAMTALSDIEVIH 193


>gi|295692675|ref|YP_003601285.1| valyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030781|emb|CBL50260.1| Valyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 879

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 138/358 (38%), Gaps = 36/358 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    DK+L   ++  +     ER  + +      + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLADKVLENQKTDGKVNFVPERFEQTLDHWMEDVHDWCISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNAEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNALVTGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N     +  + 
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
            D     +P    F  SD  I    +  + E+           A  +  + +     D Y
Sbjct: 588 ADAKPAHMPDASKFDLSDRWIFDRLNHTVSEVTRLFDEYQFGEAGREAYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            +  K   L   + +  +      + ++ Q+  LL   +P +  K++  L +  E + 
Sbjct: 648 IEISKV-ALNGDDEELKARKQENLIWILDQILRLLHPIMPFVTEKLW--LSMPHEGKS 702



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|161611294|ref|YP_139002.2| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|90108443|sp|Q5M5J8|SYV_STRT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 133/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  ++++ EN        A   + + + + 
Sbjct: 588 LTLDVARENVAKVAAGQAGNVTDRWILHNLNETIRKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEARLAESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|158521740|ref|YP_001529610.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510566|gb|ABW67533.1| valyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 884

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 132/364 (36%), Gaps = 47/364 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++    + +F  +    +K +         I+P         ++   ++D  +
Sbjct: 349 CYRCQTVIEPNLSKQWFVAVKPLAEKAIEAVAQGRTRIVPDTWTKTYYEWMN-NIRDWCV 407

Query: 210 SRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTT 241
           SR+   WG +IP                                 ++  W  +     +T
Sbjct: 408 SRQ-IWWGHQIPAWYCQACGEVIVAEETPTACTACNSTDLVQESDVLDTWFSSALWPFST 466

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL---- 297
            G+ D     +  F+P  + V G DIL F    W A +L   L   K++  H   +    
Sbjct: 467 LGWPDRTRLLET-FYPTSVLVTGFDILFF----WVARMLMMGLHFMKEIPFHDVYIHALV 521

Query: 298 --HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G+K+SKS GNVIDPI++I   G DALR+ L    A G+D    +  ++        
Sbjct: 522 RDEEGKKMSKSTGNVIDPIDIINTYGADALRFTLTAFAAQGRDIKLSESRIEG--YRHFI 579

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N + N    +  M+  D     P P     +D  ILS      +   + +     + A  
Sbjct: 580 NKLWNAARFA--MMHVDRGYEEPPPANAGLADRWILSRLDNARKSTADALDTYRFNDAAG 637

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   V     D Y +A KP    K   ++      V   V+R   +LL   +P +  +I
Sbjct: 638 ALYQFVWHELCDWYLEAAKPDLYGKNGEEQKEKTKQVLWHVLRDTLVLLHPIIPFVTEEI 697

Query: 474 FDIL 477
           +  L
Sbjct: 698 WHAL 701



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA  + + D+L R+ RL G +VL+  GTD  G       
Sbjct: 37  GRPGYSIVIPPPNVTGMLHMGHALNITLQDILCRYRRLCGDNVLWVPGTDHAGIATQNVV 96

Query: 63  QNAGVTT---------KVFVDQNSRNFRD-------MADVLDIS--YDDFIRTTEKRHHD 104
           +   +           + F+D+     ++           L  S  +D    T +     
Sbjct: 97  EKKLMAEGTDRHALGRQAFIDRVWAWRKEYGGTIIRQLKRLGASCDWDRERFTMDDGLSR 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             R ++ ++  +G IY+G Y   +  R      D EV            H P +
Sbjct: 157 AVREVFVRLHREGLIYRGEYLINWCPRCHTAIADIEVTYDERQGALYHIHYPFE 210


>gi|291296614|ref|YP_003508012.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471573|gb|ADD28992.1| valyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 868

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 92/394 (23%), Positives = 157/394 (39%), Gaps = 49/394 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y +    PV+ +  E +F R+    +K+L   +      +P  R  +V       +KD +
Sbjct: 349 YSDRTKAPVEPLLLEQWFVRMKPVAEKVLEGLDKGEMRFVPE-RWEKVNRDWLENIKDWA 407

Query: 209 LSRKTFDWG--IKIPDDPQYIMYV------------------------------WIDALT 236
           ++R+   WG  I    D +  +YV                              W  +  
Sbjct: 408 IARQ-LWWGHQIPAWYDEEGNIYVPDPDNPDLDCDQDPRYAHLKLRRDEDVFDTWFSSAL 466

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +T G+ D     K K++P D+ V G DI+ F    +    +  +   P    V    
Sbjct: 467 WPFSTLGWPDATPDLK-KYYPTDVLVTGYDIIFFWVARMQMSGYQFTGRAPFHTIVLHGL 525

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           ++  KG+K+SKS GN IDP+E+I++ G DA R+        G+D  +D+   ++    + 
Sbjct: 526 YLDAKGQKMSKSKGNGIDPLELIDKYGADACRFAWDYLATGGQDIRHDERRYEQ--GRNF 583

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN + N  +R V M      G    P   T +D  ++S  +R + EI E  +   + RA 
Sbjct: 584 ANKLYN-ATRFVLMN--KQAGRSSAPATPTLADRWMVSRLNRGIAEITEAYEAFDLGRAA 640

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  LV     D Y +A KP  L++ N       L+     +  L  LL   +P + ++
Sbjct: 641 RLVYELVWSEFCDWYLEAAKP-ALREGN----QATLHTLESTLATLLKLLHPIMPFITSE 695

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +++ L         Q   Q         K F+ +
Sbjct: 696 LYEALTGDTTQLALQDWPQVGARDLEAEKAFETL 729



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I           H+GHA +  I D + RF R+ G + L+  GTD  G      
Sbjct: 37  KGKGPFTIVIPPPNVTGNLHLGHALDNTIIDTIIRFKRMQGYEALYLPGTDHAGITTQVL 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        F ++N          +  S D      T ++   
Sbjct: 97  VERELAQEGLSRHDLGREKFLERVWAFKEKNGGAILHQLRRIGASCDWSRERFTMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
              R  + +   +G  Y+G     +    +   +D EV 
Sbjct: 157 RAVRRAFIEYYHQGLAYRGKRIVNWDPVAQTVVSDLEVN 195


>gi|223932581|ref|ZP_03624581.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898691|gb|EEF65052.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 883

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTADKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNESGEMYVGEEAPAGDGWVQDEDVLDTWFSSALWPFSTMGWPDENAADFQRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   + + P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGSQPFKNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDAARENVAKVAAGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEAEKVMTRSVLLYTLDQILRLLHPIMPFVTEEIFAQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKRH 102
           +                        + D+ +   R+    L +S     D F  T ++  
Sbjct: 95  EERLREQGVTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSLDYQRDRF--TLDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 153 SKAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|291303435|ref|YP_003514713.1| valyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572655|gb|ADD45620.1| valyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 874

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 135/361 (37%), Gaps = 35/361 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F ++                 ILP+E + +        L D  
Sbjct: 351 HCDRCKTTVEPRLSLQWFVKVDPLAKAAGDAVREGKVRILPLE-QEKRYFSWVDNLHDWC 409

Query: 209 LSRKTFDWG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLD 246
           +SR+   WG  I I   P                      ++  W  +     +T G+ +
Sbjct: 410 ISRQ-LWWGHRIPIWYGPGGEQICVGPGETAPEGYTQDEDVLDTWFSSALWPFSTMGWPE 468

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                + KF+P  + V G DI+ F     + +  + +    P    V         G+K+
Sbjct: 469 QTKALE-KFYPTSVLVTGYDIIFFWVVRMMLFGLYAMDGQPPFKDVVLHGLIRDQFGKKM 527

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DPIE ++  G DA+R+ L R    G D    +D ++   N    N + N  +
Sbjct: 528 SKSAGNGVDPIEWMDAYGSDAVRFTLARGSNPGADPAIGEDWVQGSRN--FCNKLWN-AT 584

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   M     +G +P P   +  D  ILS  S  + E+   M+   + +A   +     +
Sbjct: 585 RFALMSGATTEGPLPQPEQLSTIDRWILSRLSHTVTEVDAQMEAYQLGKASDTLYHFAWD 644

Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D Y +  KP  +     + A++   V   V+  L  LL    P +  +++  L   +
Sbjct: 645 EVCDWYLELSKPVLMAGG--EAATSTRRVLGHVLDTLLRLLHPMTPYVTEELWLALTGGE 702

Query: 482 E 482
           E
Sbjct: 703 E 703



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 22/164 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I           H+GHA +  I D L R  R+ G + L+  G D  G       
Sbjct: 43  DKPAYSIVIPPPNVTGSLHLGHAMDHTIIDTLIRRKRMQGFEALWMPGMDHAGISTQNVV 102

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                            +  + S   R + D +D   + F  T ++  
Sbjct: 103 ERQLAEEGLSRHDLGREAFVDRVWQWKSEYGGKISGQMRRLGDSVDWDRERF--TMDEGL 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D  + ++KK+ D G IY+      +  R     +D EV    D
Sbjct: 161 SDAVQTIFKKLYDDGLIYRAERIINWCPRCMTALSDIEVNHSDD 204


>gi|288904741|ref|YP_003429962.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731466|emb|CBI13020.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 883

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 135/355 (38%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  E      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  ++
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNEE 587

Query: 373 YDGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +          A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDQASANVDKVVAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|171778747|ref|ZP_02919843.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282704|gb|EDT48128.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 883

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 134/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  E      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAITNQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGKMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +D
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNED 587

Query: 373 YDGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +              +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDQASANVDKVVAGTGGNVTDRWILHNLNETIAKVTENFDKFEFGVAGYILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|302869352|ref|YP_003837989.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572211|gb|ADL48413.1| valyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 872

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 129/362 (35%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F   +                I P E   +        + D  
Sbjct: 350 HCSRCKTTVEPRLSLQWFVNTAPLAKAAGDAVRDGRVKIEPAE-LAKRYFAWVDNMHDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 409 ISRQ-LWWGHRIPVWYGPDGEIVCVGPDEEPPSGEGWRQDEDVLDTWFSSGLWPFSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 468 PERTP-DLAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGEQPFDVVALHGMVRDEHGK 526

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ I+  G DA R+ L R    G+D    ++  +   N    N + N 
Sbjct: 527 KMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGQDVPVSEEWCQGSRN--FCNKLWN- 583

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   +     DG +P  G  +  D  ILS  + V  E+ E  +     +    +    
Sbjct: 584 ATRFALLNGAHTDGPLPAAGDLSTVDRWILSRLAHVTAEVDEQFEAYEFAKVCDLLYHFA 643

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  KP  L +  P  A     V   V+ QL  LL   +P + ++++  L  
Sbjct: 644 WDDVCDWYVELSKP-VLAEGGPA-ADATRRVLGHVLDQLLRLLHPVIPFVTDELWAALSG 701

Query: 480 AD 481
            +
Sbjct: 702 GE 703



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+E  + D L R  ++ G + L+  G D  G      
Sbjct: 44  SEKPPFTIVIPPPNVTGSLHMGHAFEHTLMDALTRRKKMQGYEALWLPGMDHAGIATQNL 103

Query: 62  AQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            +               + FV++  +             R + D +D   + F  T ++ 
Sbjct: 104 VERQLAGEGLSRHDLGREKFVERVWQWKAESGGAILGQMRRLGDAVDWDRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D G IY+      +  R     +D EV    D
Sbjct: 162 LSRAVQTMFKKLFDDGLIYRANRIINWCPRCLTALSDIEVEHTDD 206


>gi|148990086|ref|ZP_01821340.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924612|gb|EDK75699.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 883

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|291166072|gb|EFE28118.1| valine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 885

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 86/363 (23%), Positives = 154/363 (42%), Gaps = 43/363 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    HN V+ M  + +F ++       L   E+    ++P  R +++ +     ++D  
Sbjct: 349 HCYRCHNVVEPMVSKQWFVKMKDLAQPALEALETKKLNLVPD-RFDKIYNMWLENIRDWC 407

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                            +  + ++  W  +    ++
Sbjct: 408 ISRQ-LWWGHRIPAYYCEDCGEMIVAKQKPERCYKCHSANLEQDEDVLDTWFSSALWPMS 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK 299
           T G+ +       +F+P    V G DI+ F  I      L     +P K VF HG +   
Sbjct: 467 TLGWPEETP-EMFRFFPTSTLVTGYDIIFFWVIRMVFSSLYLKKEVPFKDVFIHGLVRDD 525

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP+E+I+  G DALR+ L      G D  +  + ++   N   AN +
Sbjct: 526 QGRKMSKSLGNGIDPLEIIDHYGADALRFMLASSNTPGNDMRFYMERVESARN--FANKL 583

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRAL 414
            N  SR + M L++Y  ++ T           D+ I+S+ ++V +E+ +N+    +  A 
Sbjct: 584 WN-ASRFILMNLEEYQPVLTTREEVEPYFELGDKWIISLSNKVAKEVSDNLDKYELSLAA 642

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++         D Y +  KP  L         T LY    V++++  LL  F+P +  +
Sbjct: 643 DKIYDFTWSNFCDWYIEMVKP-RLYGEAGSEKDTALYTLQYVLKKILKLLHPFMPFITEE 701

Query: 473 IFD 475
           I+ 
Sbjct: 702 IYS 704



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 23/172 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E   I         Q H+GHA +  + D+L R+ R+ G D L+  GTD         
Sbjct: 37  KKGEAFSIVLPPPNITGQLHMGHALDHTLQDILIRYKRMQGYDTLWQPGTDHASIATEVK 96

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                  T                     + F D+     + + D  D S + F  T ++
Sbjct: 97  VVERIRQTLGKTKEEIGREEFLKHAWAWKEEFGDRIVEQMKKLGDSCDWSRERF--TMDE 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             ++     + K+ ++G IY+G     + +  +   +D EV    +  ++  
Sbjct: 155 GCNEAVLEFFVKLYEEGYIYRGNRIINWCVDCKTSLSDAEVDHEDNNGHFWH 206


>gi|47459374|ref|YP_016236.1| leucyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458704|gb|AAT28025.1| leucyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 630

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 97/568 (17%), Positives = 204/568 (35%), Gaps = 111/568 (19%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+    H+GH       D+++R+ RL G DVL   G D  G    +
Sbjct: 26  KSKDKFYALDMFPYPSGSGLHVGHPEGYTATDIISRYKRLKGFDVLHPIGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGD 118
            A ++G   + F  +N  NFR     L  S+D    + TT+  ++   + ++K+I  KG 
Sbjct: 86  YALSSGKHPQPFTLKNIENFRRQLKSLGFSFDYEKEVNTTDPSYYRWTQWIFKQIYKKGL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+ +   G+  + + + PV     + +  +++ Y D+LL
Sbjct: 146 AEIREVDVNWCPGLGTVLANEEIVENDKGEMVSERGSFPVYKKPMKQWVLKITNYADRLL 205

Query: 178 SYYESHPEFILPIERRNEVISFVK------SGLKDLSLSRKTFDWG--IKIPDDPQYIMY 229
                        + +   I   +        L+D   +R+   WG    +  D    +Y
Sbjct: 206 EDLNLLDWPDSLKKLQTNWIGKEEIDGKITYKLQDWIFARQR-YWGEPFPVYFDEDNNVY 264

Query: 230 ------------------------------------------------VWIDALTNYLTT 241
                                                            W  +   YL  
Sbjct: 265 LIDELVELPHMENIMPSGTGEGPLATNTEWVQYKKNNKIFKRDTNTMPQWAGSCWYYLAY 324

Query: 242 TGYLDNPDGS----------KAKFWPADLHVIGKDILRFHAIYWPAFL--------LSAN 283
               ++               +K+ P DL++ G++    H +Y   +         +   
Sbjct: 325 IMKQEDGTYLPIDSKKAYEAFSKWLPVDLYIGGQEHAVLHLLYARFWHKILYDLKIVPTK 384

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K +     +   G+K+SKSLGNV++P E+I+  G D LR + +          +++
Sbjct: 385 EPFQKLINQGMILGKDGQKMSKSLGNVVNPDEIIQNFGADTLRVYEMFMGPLTDTKKWNE 444

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             ++      L       V R   + ++D   +          D+  +S  + +++EI +
Sbjct: 445 STVEATYKWILR------VKRIFQIFIEDKSKINSLHK-----DDQFISEHNLLIKEITQ 493

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++++   +  +++++  V+             L K            +++ ++  AI+  
Sbjct: 494 DIEDLKFNIMISKLMIFVN------------SLYKKEK-------IYSLKPLKDFAIMFS 534

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491
              P ++ ++ + L   ++   FQS   
Sbjct: 535 TIAPHISEELLESLG--EKEIMFQSWPT 560


>gi|299782988|gb|ADJ40986.1| Valine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 886

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 135/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L+  ++        ER     +     + D  +SR+   W
Sbjct: 359 VESRLSTQWFVKMKPLAERALANQKTDDRVNFIPERFEHTFNQWMENVHDWVISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 418 GHQIPAWYHKETGEMYVGMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 478 RYFPTTTLVTGYDIIFFWVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGI 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++V+E+ GVDALR+FLV     G+D  +    +    N    N I N  SR V M L 
Sbjct: 538 DPMDVVEKYGVDALRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLG 594

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D     +P    +  +D  ILS  +  ++++    +      A   + + +     D Y 
Sbjct: 595 DMPAPQLPDQSKWDLADRWILSRLNTTVKDVTAKFEKFEFGEAGRDLYNFIWNDFCDWYI 654

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K  +L     +       +   V+ Q   L+   +P +  K++  +    ++
Sbjct: 655 EMTK-EKLNNGTDEEKDATKNILGYVLDQTLKLIHPIMPFVTEKLWQAMPHDGQS 708



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 35  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 95  VEARLAKQGVSRYDLGREKFVKQVWDWKDEYAAIIHQQWAKMGISVDYDRERFTLDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+  Y   +  +     +D EV    D
Sbjct: 155 KAVRKVFVDLYNKGLIYRATYIINWDPKARTALSDIEVEHKDD 197


>gi|169832567|ref|YP_001694056.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995069|gb|ACA35681.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 883

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IFD 
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFDQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|168492725|ref|ZP_02716868.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225854110|ref|YP_002735622.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|183577078|gb|EDT97606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225723634|gb|ACO19487.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 883

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|194398081|ref|YP_002037231.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357748|gb|ACF56196.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 883

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|55738435|gb|AAV62076.1| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 901

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 132/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 370 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 428

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 429 WGHQIPAWYNAEGEIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 488

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 489 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 548

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 549 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 605

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 606 LTLDVARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 665

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 666 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 719



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 52  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 111

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 112 VEARLAESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 172 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 211


>gi|256396396|ref|YP_003117960.1| valyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362622|gb|ACU76119.1| valyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 882

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 135/361 (37%), Gaps = 39/361 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E      ++V   + D +
Sbjct: 357 HCSRCETVVEPRLSMQWWVKVEPLAKAAGDAVRDGRVQIHPKEMEPRYFAWVD-NMHDWT 415

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I I   P                        ++  W  +     +T G+
Sbjct: 416 ISRQ-LWWGHRIPIWYGPDGEVVCVGPDEEPPAGAGWQQDSDVLDTWFSSGLWPFSTLGW 474

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+P  +   G DI+ F     + +  + +    P  K V S       G+
Sbjct: 475 PERTA-DLAKFYPTSVLHTGYDIIFFWVARMMMFGLYAMDGKQPFDKVVLSGLVRDQFGK 533

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP+E +++ G DA+R+ L+R    G D    +D +    N   A  I N 
Sbjct: 534 KMSKSKGNGVDPLEWMDKFGSDAVRFGLLRGANPGSDQAVAEDWIAGARN--FATKIWN- 590

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M        +P+    T  D  ILS  + V+ E+    ++    +A+  +    
Sbjct: 591 ATRFAMMNGAYVPAELPSADRLTVEDRWILSRLNEVVAEVDALYEDFQFAKAMEALYHFA 650

Query: 422 SE--VDRYFDAQK---PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +   D Y +  K   P  +   +PD A T   V   V+  +  LL   VP +   ++  
Sbjct: 651 WDEVCDWYIELSKLRLPIGVAPDDPD-AQTARAVLGHVLDVMLRLLHPAVPYVTETLWTA 709

Query: 477 L 477
           L
Sbjct: 710 L 710



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I           H+GHA    I D + R  R+ G + L+  G D  G     A
Sbjct: 49  SDKEPFTIVIPPPNVTGSLHVGHALNQSIQDAIIRRKRMQGFEALYLPGMDHAGIATQNA 108

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                            +  +     R +   +D S + F  T ++ 
Sbjct: 109 VERELAKEGLSRHDLGREAFVRKVWDWKAEYGGKILGQQRRLGISVDWSRERF--TMDEG 166

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ + G IY+      +  R     +D EV    +
Sbjct: 167 LSKAVQTIFKKLYEDGLIYRAERIINWCPRCLTALSDIEVDHYDE 211


>gi|326791024|ref|YP_004308845.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541788|gb|ADZ83647.1| valyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 880

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 155/380 (40%), Gaps = 17/380 (4%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
              + G   +        ++ + +   +E+ K A     + + N V    E+ Y+  L  
Sbjct: 338 HTHNVGTHDRCKCVIEPMIKAQWFVKMEEMAKPAIEAVKSGELNLVPKRMEKTYYNWLEN 397

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            +D  +S         +P     +    + +  K  + S+ +   G     D    +  W
Sbjct: 398 IRDWCISRQLWWGHR-IPAYYCQDCGEIIIAREKPHTCSKCS---GSNFVQDED-TLDTW 452

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
             +     +T G+ +N +  K  F+P  + V G DI+ F    + +        +P    
Sbjct: 453 FSSALWPFSTLGWPENTEELK-HFYPTSVLVTGYDIIFFWVIRMVFSGIEQMGEIPFKDV 511

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +F        G K+SKSLGN +DP+EVIE+ G DALR  LV   A G D  +  + ++  
Sbjct: 512 LFHGLVRAADGRKMSKSLGNGVDPLEVIEKYGADALRLTLVTGNAPGNDMRFYYERVEA- 570

Query: 350 VNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            N +  N + N  +R + M  +  D  +         +D+ ILS  + + +E+ +NM   
Sbjct: 571 -NRNFGNKLWN-AARFIMMNYEGEDINLTVDLKDLIPADKWILSKVNTLAKEVTDNMDKY 628

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            +  A+ ++     E   D Y +  KP    K +  R + +      V+ Q+  +L  ++
Sbjct: 629 DLGVAVQKLYDFAWEEFCDWYIEMVKPRLYNKEDVTRPAALW-TLKTVMTQILKMLHPYM 687

Query: 467 PKLANKIFDILFVADENRCF 486
           P +  +IF  L + D+    
Sbjct: 688 PFITEEIF--LGLQDQEDSI 705



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNITGQLHMGHALDNTLQDILTRYKRMQGFNTLWVPGTDHASIATEVK 92

Query: 62  AQNAG----------------VTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + +Q      +    L  S  +D    T ++   
Sbjct: 93  VVEKIAAEGLTKEDLGREGFLEKVWEWKEQYGGRIVEQLKKLGSSCDWDRERFTMDEGCS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  + ++ ++ +KG IY+G     +        +D EV       ++     PV   +E
Sbjct: 153 EAVQEVFIRLYEKGYIYRGSRIINWCPVCGTSISDAEVEHEEKEGHFWHLRYPVVGSDE 211


>gi|184154973|ref|YP_001843313.1| valyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|183226317|dbj|BAG26833.1| valyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 884

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 135/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L+  ++        ER     +     + D  +SR+   W
Sbjct: 359 VESRLSTQWFVKMKPLAERALANQKTDDRVNFIPERFEHTFNQWMENVHDWVISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 418 GHQIPAWYHKETGEMYVGMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 478 RYFPTTTLVTGYDIIFFWVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGI 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++V+E+ GVDALR+FLV     G+D  +    +    N    N I N  SR V M L 
Sbjct: 538 DPMDVVEKYGVDALRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLG 594

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D     +P    +  +D  ILS  +  ++++    +      A   + + +     D Y 
Sbjct: 595 DMPAPQLPDQSKWDLADRWILSRLNTTVKDVTAKFEKFEFGEAGRDLYNFIWNDFCDWYI 654

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K  +L     +       +   V+ Q   L+   +P +  K++  +    ++
Sbjct: 655 EMTK-EKLTNGTDEEKDATKNILGYVLDQTLKLIHPIMPFVTEKLWQAMPHDGQS 708



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 35  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 95  VEARLAKQGVSRYDLGREKFVKQVWDWKDEYAAIIHQQWAKMGISVDYDRERFTLDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+  Y   +  +     +D EV    D
Sbjct: 155 KAVRKVFVDLYNKGLIYRATYIINWDPKARTALSDIEVEHKDD 197


>gi|302380657|ref|ZP_07269122.1| valine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303233692|ref|ZP_07320346.1| valine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311600|gb|EFK93616.1| valine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302495126|gb|EFL54878.1| valine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 872

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 79/370 (21%), Positives = 148/370 (40%), Gaps = 36/370 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H  V+ +  + +F ++       L  Y+      +P  R  +V       ++D  
Sbjct: 344 HCERCHTTVEPLISKQWFVKMDKLAKLALDAYKKEEIRFIPK-RFEKVYVNWLENIRDWC 402

Query: 209 LSRKTFDWGIKIP-----------------------DDPQYIMYVWIDALTNYLTTTGYL 245
           +SR+   WG ++P                        DP   +  W  +     +T G+ 
Sbjct: 403 ISRQ-LWWGHRLPVYYHNETGEVVVARENPDQQKYTQDPD-TLDTWFSSALWPFSTLGWP 460

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
              +  K  F+P ++ V G DI+ F    + + +      +P      +      +G K+
Sbjct: 461 HETEDLK-YFFPTNVLVTGYDIIFFWVIRMVFSSLYNLGEVPFKDVYLTGLVKDSQGRKM 519

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDPIEVI++ G DALR+ L+     G D  +  + ++   N +  N + N  S
Sbjct: 520 SKSLGNGIDPIEVIDQYGADALRFALITGNTPGNDSRFYMEKVEA--NRNFCNKLWN-AS 576

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           R V M +++ +            D+ I+S  + V+ E+  N+    I  A  ++      
Sbjct: 577 RFVFMNVEE-NVKNIDEVELQIEDKWIISSLNNVIDEVSTNLNKYEIGIAAEKIYDFTWN 635

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D Y +  KP  L   N     + + V +  +  +  LL  F+P +  +I+  L   +
Sbjct: 636 VFCDWYIELVKP-RLYGDNAKLKESAISVLIYTLTNVIKLLHPFMPYITEEIYSYLPNKN 694

Query: 482 ENRCFQSLDQ 491
           +    ++  +
Sbjct: 695 DMLINETWPK 704



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I           H+GHA    I D+L R +R+DG   L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNVTGNLHLGHALNNTIQDILIRKNRMDGYSALWVPGTDHASIATEAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
             N                       +  +   N ++    L +S D      T +    
Sbjct: 93  VVNKLKEEGKSKESLGRDGFLEASWDWTREYGGNIKNQLKKLGVSCDWSREAFTLDDNLT 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +    ++ K+ +   IY+G     +        +D EV    +  ++  
Sbjct: 153 EAVEEVFIKMYNDDLIYQGDRIVNWCPNCHTAISDIEVIHEDESGHFWN 201


>gi|300123023|emb|CBK24030.2| Methionyl-tRNA synthetase [Blastocystis hominis]
          Length = 358

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 158/317 (49%), Gaps = 15/317 (4%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +ST I Y N +PH+GH Y   +AD + R+ ++ G     TTGTDEHGQK+ K A+   + 
Sbjct: 32  VSTPIYYVNGEPHLGHIYSTALADAICRWEQMKGKSTFLTTGTDEHGQKVQKEAEKKHME 91

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            K + D  +  F+      D+    FIRTT+  H D    +W ++   GD+Y+  Y G+Y
Sbjct: 92  VKNYCDSIASVFQSELSHYDLQLGRFIRTTDPDHVDLVHQVWNELQRNGDLYEASYRGYY 151

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-----H 183
              DEA+  + ++Y+    ++     NPV+ +EE  + FR   ++               
Sbjct: 152 CRSDEAFLTESQIYEENGQKFSKESRNPVELVEERNWMFRRLYWRFCAPIATGWSSARSS 211

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
              I+P    N +I  ++   +DLS+SR        I  D +  +YVWIDALTNY     
Sbjct: 212 HAQIVPSSCFNSMIRTIEESAQDLSVSRPLSRVPWAIDVDGRDGVYVWIDALTNY----- 266

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                  S+ + + + LHV GKDI +FH  ++P  LL+ +  LP ++  H      G K+
Sbjct: 267 ----LTTSETRSFDSVLHVFGKDIAKFHCYFYPCLLLALHRKLPDRMICHSHWTVNGTKM 322

Query: 304 SKSLGNVIDPIEVIEEV 320
           SKS GN + P++ +   
Sbjct: 323 SKSKGNYV-PLQALRRF 338


>gi|15900480|ref|NP_345084.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657453|ref|ZP_01408202.1| hypothetical protein SpneT_02001347 [Streptococcus pneumoniae
           TIGR4]
 gi|81532202|sp|Q97S45|SYV_STRPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14972043|gb|AAK74724.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 883

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 --DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             D      T  A  E+    D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|312277882|gb|ADQ62539.1| Valyl-tRNA synthetase, putative [Streptococcus thermophilus ND03]
          Length = 883

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 132/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDVARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEARLAESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|322372403|ref|ZP_08046939.1| valine--tRNA ligase [Streptococcus sp. C150]
 gi|321277445|gb|EFX54514.1| valine--tRNA ligase [Streptococcus sp. C150]
          Length = 883

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDAARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +I+  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 701



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAESGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|161936377|ref|YP_140891.2| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|90108442|sp|Q5M111|SYV_STRT1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 132/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDVARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEARLAESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|116627368|ref|YP_819987.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100645|gb|ABJ65791.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 883

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 132/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNTEGEIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDVARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEARLAESGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|319892709|ref|YP_004149584.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162405|gb|ADV05948.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464257|gb|ADX76410.1| valyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 876

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 141/369 (38%), Gaps = 37/369 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++   ++ L+  +++        R  +  +     ++D ++SR+   W
Sbjct: 351 VEPYLSTQWFVKMAPLAEQALNNQKTNGRIEFVPPRFEKTFNRWMEEIRDWTISRQ-LWW 409

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 410 GHQIPAWYHNETGELYVGEEAPVDIENWTQDEDVLDTWFSSALWPFSTLGWPNEDAADYQ 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +F+P ++ V G DI+ F    + +     +   P    +         G K+SKSLGN +
Sbjct: 470 RFYPTNVLVTGYDIIFFWVARMIFQGLEFTGQKPFNDVLLHGLVRAEDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G D+LRYFL    + G D  Y  + ++   N    N I N    S+  I  
Sbjct: 530 DPMDVIDQYGADSLRYFLATGSSPGHDLRYSTEKVESVWN--FINKIWNAARFSLMNIGD 587

Query: 372 DYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            +           + +D+ IL+  +  +  + +             + + + +   D Y 
Sbjct: 588 SFKFEDINLSSDLSVADQWILTRLNETIDTVTQLSDKYEFGEVGRVLYNFIWDEFCDWYI 647

Query: 429 DAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---R 484
           +  K P  +   +  + +    V    + ++  LL  F+P +   I+  L    E+    
Sbjct: 648 EMSKIP--MNGDDEVQKNVTRSVLSYALDRIMRLLHPFMPFVTEHIWQNLPHEGESIVTS 705

Query: 485 CFQSLDQRL 493
            + ++D  L
Sbjct: 706 AWPTVDASL 714



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         + H+GHA++  + D+L R  R+ G + L+  G D  G      
Sbjct: 32  SDKPTYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYETLYLPGMDHAGIATQAK 91

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +  D      T +    
Sbjct: 92  VEAKMREEGISRHDIGREKFLEKAWEWKEEYASFIRQQWAKLGLGLDYSRERFTLDSGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQH 154
              R ++  + +KG IY+G     +        +D E V++  +G++Y+ ++
Sbjct: 152 QAVRKVFVDMYNKGLIYRGERIINWDPAARTALSDIEVVHEDVNGKFYHFKY 203


>gi|312864725|ref|ZP_07724956.1| valine--tRNA ligase [Streptococcus downei F0415]
 gi|311099852|gb|EFQ58065.1| valine--tRNA ligase [Streptococcus downei F0415]
          Length = 883

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 135/355 (38%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK- 371
           P++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 372 ---DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
              D         A +E+    D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LSLDEATTNVAKVAASEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N  +      V +  + ++  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEAKKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYAATIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|296111094|ref|YP_003621475.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832625|gb|ADG40506.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 894

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 70/352 (19%), Positives = 131/352 (37%), Gaps = 36/352 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F +++   ++ L   ++  E +  +  R E             +  +   
Sbjct: 363 PVESRLSTQWFVKMAPLAEQALDMQKNADEKVTFVPARFEDTFTRWMDNIRDWVISRQLW 422

Query: 216 WGIKI--------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           WG +I                            DP  ++  W  +     +T G+ +N  
Sbjct: 423 WGHQIPAWYKNKGTAQEEIYVGETVPEGNGWQRDPD-VLDTWFSSALWPFSTMGWPENQT 481

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              A+++P +  V G DI+ F    + +     +   P    +        +G K+SKSL
Sbjct: 482 DDFARYYPTNTLVTGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSL 541

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN +DP++VIE+ G DALR+FL      G+D  +  D +    N    N I N     + 
Sbjct: 542 GNGVDPMDVIEKYGADALRWFLATGSTPGQDVRFTYDKMDAAWN--FINKIWNASRYVIM 599

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
            +  D    +P     +  D+ ILS  ++ +  +  N        A  ++ + +     D
Sbjct: 600 NLDDDTPSTLPDVDKLSLGDKWILSRLNKTIAHVTRNFDKFEFGEAGRELYNFIWSDFAD 659

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  K     + +    + V      V+ Q   LLQ  +P +   I+  +
Sbjct: 660 WYIEMTKETLNGRGDK---APVQQTLAYVLDQTLRLLQPIMPFVTEAIWQEM 708



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 68/188 (36%), Gaps = 22/188 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA++  + D++ R  ++ GLDVL+  G D  G       
Sbjct: 41  EPEPYAIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGLDVLWLPGMDHAGIATQAKV 100

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +    +                   + ++ +   +     + +S  +D    T +   + 
Sbjct: 101 EQRLRSEGVSRYDLGREKFVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERFTLDDGLNK 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
               ++  + +KG IY+G Y   +  +     +D EV    D   +      VQ+   +G
Sbjct: 161 AVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIEVIYQDDPGAFYH----VQYPFTDG 216

Query: 165 YFFRLSAY 172
             F    Y
Sbjct: 217 TTFNGKNY 224


>gi|302874832|ref|YP_003843465.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690548|ref|ZP_07632994.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577689|gb|ADL51701.1| valyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 880

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 72/382 (18%), Positives = 145/382 (37%), Gaps = 38/382 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +   ++   + ++ M  + ++ ++ +     L          +P  R +++     
Sbjct: 340 PHTHNVSIHDRCSDVIEPMISKQWYVKMESLAKPALDAVRGGKTKFVPE-RFDKIYYNWM 398

Query: 202 SGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWID 233
             ++D  +SR+   WG +IP                               + ++  W  
Sbjct: 399 ENIQDWCISRQ-LWWGHRIPVWYCQDCGEITCSVEAPTHCTKCQSSNLRQDEDVLDTWFS 457

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  +     ++P D+ V G DI+ F    + +         P    + 
Sbjct: 458 SALWPFSTLGWPDKTE-DLEYYYPTDVLVTGYDIIFFWVARMIFSGIHNMDETPFHTVLI 516

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G K+SKSLGN +DP+EVI+  G DALR+ L+   + G D  +  D ++   N
Sbjct: 517 HGLVRAEDGRKMSKSLGNGVDPLEVIDTYGADALRFMLITGNSPGNDIRFKMDKVESARN 576

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN I N     +  +  D          ++ +D+ ILS  + +++E+ EN+    + 
Sbjct: 577 --FANKIWNASRFVMMNLDMDLVNKYKDSTKYSVADKWILSRFNTLVKEVTENIDKYELG 634

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A  ++   +     D Y +  KP  L   + +    V  V  +V+     LL   +P +
Sbjct: 635 IAGQKIYDFMWTEFCDWYIELTKP-VLWSEDEEAKGVVYNVLRKVLIGGLQLLHPIMPYI 693

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  L    ++       +
Sbjct: 694 TEEIYLHLEPEYKSITISKWPE 715



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I           H+GHA +  + DVL R  R+ G   L+  G D         
Sbjct: 36  KNKKPFTIMMPPPNITGHLHLGHALDNTLQDVLIRTKRMQGFSTLWLPGEDHASIATEVR 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D      +     + +S  +     T ++  +
Sbjct: 96  VETELLKQGLKKKEMGREAFLEKVWEWSDTYRERIKTQLKKVGVSADFTREAFTMDENLN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+ ++G IY+G     +  + +   +D E+        +     PV+  +E
Sbjct: 156 KAVRTVFVKLYEEGLIYQGNRITNWCPKCQTAISDAEIIYEEKEGNFWHIKYPVKDSDE 214


>gi|116493039|ref|YP_804774.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116103189|gb|ABJ68332.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 888

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 131/347 (37%), Gaps = 35/347 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       L   ++  +     ER     +       D  +SR+   W
Sbjct: 361 VESRLSTQWFVKMDKLAQMALDNQKTDDKVNFIPERFEHTFNQWMENAHDWVISRQ-LWW 419

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     TT G+ D      
Sbjct: 420 GHQIPAWYNKQTGEVYVGEEAPQDVENWEQDPD-VLDTWFSSALWPFTTMGWPDENSADF 478

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 479 KRYFPTSTLVTGYDIIFFWVARMIFQSLEFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNG 538

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +  D +    N    N I N  SR V M L
Sbjct: 539 IDPMDVIDKYGADALRWFLSNGSTAGQDLRFSYDKMDSAWN--FINKIWN-ASRYVIMNL 595

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
              +   +P     T +D+ ILS  ++ ++++           A   + + + +   D Y
Sbjct: 596 DQVEQPKLPELSQLTLADKWILSRLNKTVEQVTHFFDVYDFGEAGRAMYTFIWDDFCDWY 655

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L   +         V   V+ Q   LL   +P +  KI+
Sbjct: 656 IEMSK-EILNGEDEQAKVNTQNVLAYVLDQTLRLLHPVMPFVTEKIW 701



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D+L R  R+ G D ++  G D  G      
Sbjct: 36  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMLGYDTVWIPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + +S  YD    T ++   
Sbjct: 96  VEAKLREQGVSRYDLGREKFVDQVWEWKDEYADTIHQQWAKMGLSLDYDRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVKKVFVTLYEKGLIYRGEYIINWDPQARTALSDIEVEHQDD 198


>gi|322517283|ref|ZP_08070160.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124113|gb|EFX95652.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 901

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 133/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 370 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 428

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 429 WGHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKR 488

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 489 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 548

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  K 
Sbjct: 549 PMDVIEKYGADALRWFLSNGSAPGQDMRFSYEKMDASWN--FINKIWN-ISRYILMNNKG 605

Query: 373 YDGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +            A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 606 LTLDVARENVAKVVAGQAGNVTDHWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 665

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +I+  +
Sbjct: 666 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 719



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 52  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 111

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 112 VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGLSVDYSRERFTLDEGLS 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 172 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 211


>gi|225856278|ref|YP_002737789.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225724382|gb|ACO20234.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 883

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 --DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             D      T  A  E+    D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|15895665|ref|NP_349014.1| valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81529863|sp|Q97GG8|SYV_CLOAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15025413|gb|AAK80354.1|AE007740_1 Valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509815|gb|ADZ21451.1| valyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 881

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/387 (18%), Positives = 150/387 (38%), Gaps = 41/387 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +   ++   N ++ M  + ++ ++ +     +   ++     +P  R +++      
Sbjct: 341 HVHNVGTHDRCGNIIEPMVSKQWYVKMESLAKPAIEAVKAGKTKFVPE-RFDKIYFNWME 399

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 400 NIQDWCISRQ-LWWGHRIPVWYCKDCGEIIVSEKEPKACSKCNSENLEQDKDVLDTWFSS 458

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +     F+P D  V G DI+ F    + +        +P       
Sbjct: 459 ALWPFSTLGWPDKNE-DLEYFYPTDTLVTGYDIIFFWVARMVFSGIYNMGEVPFKHVYIH 517

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN +DP++VI+  G DALR+ L+   A G D  Y  + ++   N 
Sbjct: 518 GLVRDAEGRKMSKSLGNGVDPLDVIDTFGADALRFMLITGNAPGNDIRYKTEKVEAARN- 576

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             AN I N     +  + K+          ++ +D  ILS C+ +++E+ +N++   +  
Sbjct: 577 -FANKIWNASRFVLMNLDKEIMDKYKDLEEYSLADRWILSRCNSLVREVTDNIEKFELGI 635

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A  +V   +     D Y +  KP  +   +         V  +V+     LL   +P + 
Sbjct: 636 ASQKVYDFMWNEFCDWYIELVKP-VMYGEDEKAKGIAYNVLYKVLTVGLQLLHPVMPYIT 694

Query: 471 NKIFDILFVADEN---RCFQSLDQRLK 494
            +I+  L    +      + + +++LK
Sbjct: 695 EEIYQHLGGEYKAIAISAWPTYEEKLK 721



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 62/179 (34%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA +  + D + R  R+ G + L+  G D         
Sbjct: 36  KNKKPYTIMMPPPNITGKLHLGHALDCALQDFMIRAKRMQGYEALWLPGQDHASIATEVR 95

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +   +                    +  +     +     L +S  +     T +++ +
Sbjct: 96  VEKEILKEGLNKKEMGREKFLERVWDWTKEYRERIKGQQKKLGVSADFTRESFTMDEKLN 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ K+ + G IY+G     +  + +   +D E+    D  ++     PV+  + 
Sbjct: 156 KAVRTVFVKLYEDGLIYQGNRITNWCPKCQTALSDAEIEYKEDQGFFWHIKYPVEGEDS 214


>gi|282856769|ref|ZP_06266030.1| valine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585392|gb|EFB90699.1| valine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 901

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 84/439 (19%), Positives = 152/439 (34%), Gaps = 48/439 (10%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGC--------YSGWYSLRDEAYYNDDEVYKGAD 146
            RT +             I+      +                +++E      E      
Sbjct: 301 GRTHDLEPIQVIDEDGHMINMTEAAKEMEGMSVAEARVKSVEIMQNEGALEKIEELPHQV 360

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G  Y      V+    E +F +++   ++ ++  ++     +P +       ++  G++D
Sbjct: 361 GHCYRCGTT-VEPYLSEQWFVKVAPLAERGVAESKAGHMHWIPSQWDKTYYQWMD-GVRD 418

Query: 207 LSLSRKTFDWGIKIP--------------DDPQ--------------YIMYVWIDALTNY 238
             +SR+   WG +IP               DP                ++  W  +    
Sbjct: 419 WCISRQ-LWWGHRIPAWTCEDCGHIVVAEHDPDCCPKCGSRKLKQDEDVLDTWFSSALWP 477

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
            +T G+ ++ +     F+P  + V G DI+ F    +          +P           
Sbjct: 478 FSTMGWPEDTE-ELRYFYPTSVMVTGFDIIFFWVSRMIMMGLEFMDEVPFRDIFIHALVR 536

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             KG K+SKSLGN IDPI++I   G DALR+ +      G+D       ++        N
Sbjct: 537 DEKGRKMSKSLGNGIDPIDMINLYGADALRFTVAALTVQGRDILLGPAKIES--YKRFIN 594

Query: 357 GIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            I N  SR   M L D D    P P      D  IL    R+   + +++    I  A  
Sbjct: 595 KIWN-ASRFALMNLGDEDHEGQPDPKRMRLHDRWILERLRRLDDVVTKDIDGYFIGEAAR 653

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++   +     D Y +  KP       P+R  T   V + V R +  LL  F P +  ++
Sbjct: 654 ELYEFMWGDFCDWYIELSKPALYGDEGPERQKTTKRVLLCVFRDVLRLLHPFTPFVTEEL 713

Query: 474 FDILFVADENRCFQSLDQR 492
           +      ++    ++  + 
Sbjct: 714 WHAFAFGEKPMELEAWPEA 732



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 22/168 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++   I           H+GHAY+    D+LAR+ R  G  VL+  GTD  G       
Sbjct: 38  EKKAFSIVLPPPNVTGALHMGHAYDHTFQDILARYKRARGYSVLWLPGTDHAGIATQNVV 97

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                          + + D+     + + D  D   + F  T ++  
Sbjct: 98  ERRLAKEGTSRRALGREAFVKRTWEWKEEYRDRIVNQMKSLGDSCDWKRERF--TMDEGL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               R ++ ++ +KG IYKG Y   +  R     +D EV    +  + 
Sbjct: 156 SKAVRTVFCRLYEKGLIYKGKYIVNWCPRCHTALSDIEVEHSEEMGHM 203


>gi|260663368|ref|ZP_05864259.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552220|gb|EEX25272.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 884

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 135/355 (38%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ L+  ++        ER     +     + D  +SR+   W
Sbjct: 359 VESRLSTQWFVKMKPLAERALANQKTDDRVNFIPERFEHTFNQWMENVHDWVISRQ-LWW 417

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +       
Sbjct: 418 GHQIPAWYHKETGEMYVGMEAPADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFK 477

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 478 RYFPTTTLVTGYDIIFFWVSRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGI 537

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++V+E+ GVDALR+FLV     G+D  +    +    N    N I N  SR V M L 
Sbjct: 538 DPMDVVEKYGVDALRWFLVTGSTPGQDIRFSYKKMDASWN--FINKIWN-ASRYVIMNLG 594

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D     +P    +  +D  ILS  +  ++++    +      A   + + +     D Y 
Sbjct: 595 DMPAPQLPDQSKWDLADRWILSRLNTTVKDVTTKFEKFEFGEAGRDLYNFIWNDFCDWYI 654

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K  +L     +       +   V+ Q   L+   +P +  K++  +    ++
Sbjct: 655 EMTK-EKLNNGTDEEKDATKNILGYVLDQTLKLIHPIMPFVTEKLWQAMPHDGQS 708



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 35  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 95  VEARLAKQGVSRYDLGREKFVKQVWDWKDEYAAIIHQQWAKMGISVDYDRERFTLDEGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+  Y   +  +     +D EV    D
Sbjct: 155 KAVRKVFVDLYNKGLIYRATYIINWDPKARTALSDIEVEHKDD 197


>gi|159039402|ref|YP_001538655.1| valyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918237|gb|ABV99664.1| valyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 872

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 90/473 (19%), Positives = 162/473 (34%), Gaps = 47/473 (9%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDF 94
           R+  L G +V         G++I          T    + + +         +   +D  
Sbjct: 243 RYRHLIGTEVELPL----TGRRIPIVGDEHVDPTFGTGMVKVTPAHDPNDFEIGQRHDLP 298

Query: 95  IRT-TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
            RT  ++R   T    ++ +    D ++   +   +LR++     ++        + +  
Sbjct: 299 SRTIMDERGVITAHGPFQGL----DRFEARPAIVAALREQGLVVAEKRPYAHAVGHCSRC 354

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              V+      +F   S                I P E       +V   + D  +SR+ 
Sbjct: 355 RTTVEPRLSLQWFVNTSPLAKAAGDAVRDGRVKIEPAELAKRYFGWVD-NMHDWCISRQ- 412

Query: 214 FDWGIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
             WG +I                            + ++  W  +     +T G+ +   
Sbjct: 413 LWWGHRIPVWYGPAGEVVCVGPDEEPPAGDGWHQDEDVLDTWFSSALWPFSTLGWPEQTP 472

Query: 250 GSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
              AKF+P  + V G DIL F     + +  + +    P              G+K+SKS
Sbjct: 473 -DLAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGRQPFDVVALHGMVRDEHGKKMSKS 531

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP++ I+  G DA R+ L R    G D    ++  +   N    N + N  +R  
Sbjct: 532 FGNVVDPLDWIDRFGADATRFTLARGANPGGDVSVSEEWCQGSRN--FCNKLWN-ATRFA 588

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
            +      G +P+    +  D  ILS  + V  E  E  +     +    +     +   
Sbjct: 589 LLNGAHTQGAMPSATELSTVDRWILSRLAHVTAEADEQFEAYEFGKVCELLYHFAWDEVC 648

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D Y +  KP  L    P  A T   V   V+ QL  LL   +P +  +++  L
Sbjct: 649 DWYVELTKP-TLAGGGPA-ADTTRRVLGHVLDQLLRLLHPVIPFVTEELWIAL 699



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 50/165 (30%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +    DVL R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPFTIVLPPPNVTGSLHMGHALDHTTQDVLIRRKRMQGYEALWLPGVDHAGIATQNV 103

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                                     R + D +D   + F  T ++ 
Sbjct: 104 VERQLGAQGLSRHDLGRDAFVERVWRWKAESGGAILGQMRRLGDSVDWERERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K + D G IY+      +  R     +D EV    D
Sbjct: 162 LSRAVQTMFKALYDDGLIYRAERIINWCPRCLTALSDIEVEHTDD 206


>gi|170016586|ref|YP_001727505.1| valyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803443|gb|ACA82061.1| Valyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 894

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/326 (22%), Positives = 126/326 (38%), Gaps = 16/326 (4%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+++            ++           +   I    +     +  +   + +     W
Sbjct: 394 VEFVPARFEDTFTRWMENIRDWVISRQLWWGHQIPAWYKNKGTDQEEIFVGTQAPDGDGW 453

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                 DP  ++  W  +     +T G+ +N  G  AK++P +  V G DI+ F    + 
Sbjct: 454 ----ERDPD-VLDTWFSSALWPFSTMGWPENTTGDFAKYYPTNTLVTGYDIIFFWVARMM 508

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +     +   P    +        +G K+SKSLGN +DP++VIE+ G DALR+FL     
Sbjct: 509 FQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIEKYGADALRWFLATGST 568

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSV 393
            G+D  +  D +    N    N I N  SR V M L D+     P     T +D+ ILS 
Sbjct: 569 PGQDVRFTYDKMDAAWN--FINKIWN-ASRYVIMNLDDHTPSTLPDLTQLTLADKWILSR 625

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  +  +  N        A  ++ + +     D Y +  K  E    + D+   V    
Sbjct: 626 LNTTIDNVTRNFDKFEFGEAGRELYNFIWSDFADWYIEMTK--ETLNGDGDKT-PVQQTL 682

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
             V+ Q   LLQ  +P +   I+  +
Sbjct: 683 AYVLDQTLRLLQPIMPFVTEAIWQEM 708



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E     I         + H+GHA++  + D++ R  ++ G+DVL+  G D  G       
Sbjct: 41  EPAPYAIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKKMQGMDVLWLPGMDHAGIATQAKV 100

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + ++ +   +     + +S  +D    T ++  + 
Sbjct: 101 EQRLRAEGVSRYDLGREKFVEQVWDWKNEYAATIKQQWGKMGLSLDFDRERFTLDEGLNK 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
               ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 161 AVNKVFIDLYNKGLIYRGEYIINWDPQARTALSDIEVIYQDD 202


>gi|169350153|ref|ZP_02867091.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
 gi|169292936|gb|EDS75069.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
          Length = 878

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 135/362 (37%), Gaps = 31/362 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++       L       +     ER  +  +     ++D  +SR+   W
Sbjct: 357 VEPYLSKQWFVKMKPLAKMALDNQLKDSKVNFVPERFEKTFNQWMENIEDWCISRQ-LWW 415

Query: 217 G-----------------------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G                       I+     + ++  W  +     +T G+ +       
Sbjct: 416 GHQVPAWYHKETGEVYVGKQPPKDIENWKQDEDVLDTWFSSALWPFSTLGWPNEDSELFK 475

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 476 RYFPTNTLVTGYDIIFFWVSRMIFQSLHFTDQRPFENVLIHGLIRDEQGRKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D LR+FL    A G D  Y  + L+   N    N I N     +  I +
Sbjct: 536 DPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLESSWN--FINKIWNSARFVLMNIDE 593

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                  T       D+ IL+  + V++E+  NM          ++   + +     Y +
Sbjct: 594 SMKYEDLTFDNLNLCDKWILNRLNEVIREVDINMDKFEFVNVGTELYKFIWDDFCSWYIE 653

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             K   L   N       L   V V+  +  +L  F+P +  +IF  +   +E+ C  S 
Sbjct: 654 LTKV-HLNSENEVEKQASLNTLVYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESICIASW 712

Query: 490 DQ 491
            +
Sbjct: 713 PE 714



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 70/180 (38%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I         + H+GHA++  + D++ R+ R+ G D L+  G D  G      
Sbjct: 38  TSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMDHAGIATQAK 97

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R   + L +S D      T ++   
Sbjct: 98  VEARMQEEGVSRYDLGREGFLKKAWSWKEEYASIIRSQWEKLGLSLDYSKERFTLDEGLS 157

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  + ++ K+ ++G IY+G     W  ++  A  N + ++K  +G  Y  ++  V   EE
Sbjct: 158 EAVKEVFVKLYNEGLIYQGKRIINWDPMQRTALSNIEVIHKEIEGAMYYFKYKIVDSDEE 217


>gi|323127776|gb|ADX25073.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 882

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|227891066|ref|ZP_04008871.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300900|ref|ZP_07207072.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|227867155|gb|EEJ74576.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851499|gb|EFK79211.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 886

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 128/345 (37%), Gaps = 31/345 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   E+         R     +     + D  +SR+   W
Sbjct: 360 VESRLSTQWFVKMKPLAEAALKNQETDDRVDFVPPRFEHTFTQWMENVHDWVISRQ-LWW 418

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 419 GHQIPAWYHKETGEIYVGEEAPEDIENWEQDSDVLDTWFSSALWPFSTMGWPDTESPDFK 478

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 479 RYFPTNTLVTGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGNGI 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL    A G+D  +    +    N    N I N     +  +  
Sbjct: 539 DPMDVIDKYGADALRWFLSNGSAPGQDVRFSYTKMDAAWN--FINKIWNASRFVIMNLDS 596

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
           D +  +P    +  +D+ ILS  +  ++++     +     A   + + +     D Y +
Sbjct: 597 DVELSLPEASEWQLADKWILSRLNDTVRDVTRLFDSFEFGEAGRALYNFIWNDFCDWYIE 656

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K   L   +         +   V+ Q+  L+   +P +  KI+
Sbjct: 657 MAK-ENLTGEDEKLKKNTQRILRYVLDQILRLMHPIMPFVTEKIW 700



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +  + +         L +S  YD    T +    
Sbjct: 96  VEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDD 198


>gi|56807922|ref|ZP_00365746.1| COG0525: Valyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 882

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEQAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|313892624|ref|ZP_07826211.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119021|gb|EFR42226.1| valine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 883

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 84/412 (20%), Positives = 155/412 (37%), Gaps = 45/412 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+        L ++      E  + A G   +     ++ +    +F ++    
Sbjct: 312 YNGMDRYEARKQIIKDLEEQGLLVKTETKEHAVGH-CSRCETVIEPLTTRQWFVKMKPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--------------- 218
              +    S     +P    N  I +++  + D  +SR+   WG                
Sbjct: 371 KPAMDAVTSGKTKFVPERFTNIYIQWLE-NIHDWCISRQ-LWWGHRIPVWYCEECKETIA 428

Query: 219 --------------KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                         KI  DP  ++  W  +     +T G+ +  +  K +++P    V G
Sbjct: 429 SRTDITECTNCGSKKINQDPD-VLDTWFSSALWPFSTMGWPEKTETLK-QWYPTSTMVTG 486

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+ F    + + +      +P             +G K+SKSLGN IDP+EVIE+ G 
Sbjct: 487 YDIIFFWVARMMFMSMEFMHEIPFKYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGA 546

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPG 381
           DALR+ LV     G D  +  + ++   N + AN + N  ++   M L +YD    P   
Sbjct: 547 DALRFTLVTGNTPGNDMRFYYERVEG--NRNFANKLWN-ATKFTLMNLDNYDKNFTPEEK 603

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT 439
            +T +D+ IL   ++  + +  N+    +  A   + +       D Y +  K     + 
Sbjct: 604 DYTLADKWILEKLAKTEEFVSRNLDKYELGEAADSIYNFAWNCFCDWYIETAKSRLYAEH 663

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             DR     YV V  + ++  LL  F+P +   ++  L    E +     + 
Sbjct: 664 CRDR-QVTQYVLVYTLTRMLALLHPFMPFITEHLWQHL--PHEGKTLARAEW 712



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 35  SSKEPYSIVLPPPNVTGQLHMGHALDGTLQDILIRYKRMQGYNVMWLPGKDHAGIATQVK 94

Query: 62  AQ-------------------NAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  + +   +  R +    D + + F  T +  
Sbjct: 95  VEKQIAKEGLTKYDLGREKFLERVWQWKEKYGNTIGKQIRKLGSSCDWTRERF--TMDDV 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R ++  + +KG IY+G     +  R +   +D EV    +       + P+   +
Sbjct: 153 CAKAVREVFIALYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLYYVNYPIVGSD 212

Query: 162 E 162
           E
Sbjct: 213 E 213


>gi|315504173|ref|YP_004083060.1| valyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410792|gb|ADU08909.1| valyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 872

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 129/362 (35%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F   +                I P E   +        + D  
Sbjct: 350 HCSRCKTTVEPRLSLQWFVNTAPLAKAAGDAVRDGRVKIEPAE-LAKRYFAWVDNMHDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 409 ISRQ-LWWGHRIPVWYGPDGEIVCVGPDEEPPSGEGWRQDEDVLDTWFSSGLWPFSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 468 PERTP-DLAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGVQPFDVVALHGMVRDEHGK 526

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ I+  G DA R+ L R    G+D    ++  +   N    N + N 
Sbjct: 527 KMSKSFGNVVDPLDWIDRFGADATRFTLARGANPGQDVPVSEEWCQGSRN--FCNKLWN- 583

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   +     DG +P  G  +  D  ILS  + V  E+ E  +     +    +    
Sbjct: 584 ATRFALLNGAHTDGPLPAAGDLSTVDRWILSRLAHVTAEVDEQFEAYEFAKVCDLLYHFA 643

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  KP  L +  P  A     V   V+ QL  LL   +P + ++++  L  
Sbjct: 644 WDDVCDWYVELSKP-VLAEGGPA-ADATRRVLGHVLDQLLRLLHPVIPFVTDELWAALSG 701

Query: 480 AD 481
            +
Sbjct: 702 GE 703



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+E  + D L R  ++ G + L+  G D  G      
Sbjct: 44  SEKPPFTIVIPPPNVTGSLHMGHAFEHTLMDALTRRKKMQGYEALWLPGMDHAGIATQNL 103

Query: 62  AQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            +               + FV++  +             R + D +D   + F  T ++ 
Sbjct: 104 VERQLAGEGLSRHDLGREKFVERVWQWKAESGGAILGQMRRLGDAVDWDRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D G IY+      +  R     +D EV    D
Sbjct: 162 LSRAVQTMFKKLFDDGLIYRANRIINWCPRCLTALSDIEVEHTDD 206


>gi|256847984|ref|ZP_05553428.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715044|gb|EEU30021.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 887

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 130/356 (36%), Gaps = 34/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   ++         R     +     + D  +SR+   W
Sbjct: 361 VEARLSTQWFVKMKPLAEAALKNQKTADRVNFIPGRFENTFTQWMENIHDWVISRQ-LWW 419

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 420 GHRIPAWYNKQTGEMYVGMEAPKDAENWEQDHDVLDTWFSSALWPFSTMGWPDTDAPDYK 479

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 480 RYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGKAPFKNVLLHGLIRDEQGRKMSKSLGNGI 539

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI + GVDALR+FLV     G+D  +    +    N    N I N  SR V M L 
Sbjct: 540 DPMDVIAKYGVDALRWFLVTGSTPGQDIRFSYKKMDAAWN--FINKIWN-ASRYVIMNLD 596

Query: 372 DYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
             +     P    +  +D  IL+  +  +Q++    +      A   + + +     D Y
Sbjct: 597 GMEHAPQLPDKSKWDLADRWILAKLNATVQQVNAQFEKFEFGEAGRALYNFIWNDFCDWY 656

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K  +L    P        +   V+ Q   L+   +P +  K++  +    E+
Sbjct: 657 IEMSK-EKLTNGTPTEKEDTKNILAYVLDQTLKLIHPIMPFVTEKLWLSMPHDGES 711



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 37  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGYDVLWLPGMDHAGIATQAK 96

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 97  VEARLRKQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLN 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 157 KAVRKVFVDLYNKGLIYRGTYIINWDPQARTALSDIEVIHKDD 199


>gi|322392565|ref|ZP_08066025.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144557|gb|EFX39958.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 883

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/355 (20%), Positives = 133/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 T          A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLEQATANVEKVIKKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAESGISRYDLGREKFLEKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|251782968|ref|YP_002997271.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391598|dbj|BAH82057.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 882

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDNRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLRGQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|296879657|ref|ZP_06903634.1| valine--tRNA ligase [Clostridium difficile NAP07]
 gi|296429370|gb|EFH15240.1| valine--tRNA ligase [Clostridium difficile NAP07]
          Length = 834

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 158/403 (39%), Gaps = 42/403 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++   +    L+++ Y    + +    G  Y   H  V+    E +F ++    
Sbjct: 259 YEGMDRFECRKAIVADLKEQGYLIKIKEHNHNVGTCYR-CHTVVEPRLSEQWFVKMEELA 317

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   +      +P +     + +++  ++D  +SR+ +                   
Sbjct: 318 KPAIDILKKGELEFVPEKFDKTYLQWLE-NIRDWCISRQLWWGHQIPAYYCQECGEIVVA 376

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ +  +     ++P  + V G D
Sbjct: 377 RKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALD-YYYPTSVLVTGYD 435

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F  +    A +   N      V  HG +   +G K+SKSLGN IDP+E+IE+ G DA
Sbjct: 436 IIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADA 495

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+ L    + G D  +  + ++     + AN + N  SR V M + +      T     
Sbjct: 496 LRFTLTTGNSPGNDMRFYMERVE--FARNFANKLWN-ASRFVFMNIDEDIIKNMTRESVK 552

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              T +D+ I+S  + +++E   NM    +  AL ++         D Y +  KP  L  
Sbjct: 553 EDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYG 611

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  S  LY    V+ ++  LL  ++P +  +I+  L   +
Sbjct: 612 EDTNAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVE 654



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 58/155 (37%), Gaps = 24/155 (15%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-------------- 67
           +GHA +  + D+L R+ R+DG +  +  GTD                             
Sbjct: 1   MGHALDHTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKVVERIKKQEGKTKYEIGREE 60

Query: 68  -------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                      F  + S   + + D  D   + F  T ++  ++     +  + +KG IY
Sbjct: 61  FLKRAWEWKDEFGGKISNQLKQLGDSCDWDKERF--TMDEGCNEAVIEFFVSLYEKGHIY 118

Query: 121 KGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +G     +    +   +D EV ++  DG +Y+ ++
Sbjct: 119 RGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKY 153


>gi|238761088|ref|ZP_04622065.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238761341|ref|ZP_04622317.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700315|gb|EEP93056.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700568|gb|EEP93308.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 415

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 17/268 (6%)

Query: 251 SKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              +FW  D      H IGKDI+ FH+++WPA L  +N   P  +F HG++   G K+SK
Sbjct: 15  DFDEFWRKDSTTDLYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSK 74

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSR 364
           S G  I     ++ +  D LRY+   +++    D   + +   +RVNAD+ N + NL SR
Sbjct: 75  SRGTFIKAGTYLKHLDADCLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASR 134

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   I K + G +    A  E    +    +     I +   ++   +A+ ++++L    
Sbjct: 135 NAGFISKRFAGKLADHLASPE----LYKTFTDAAVSIADAYNSRESSKAIREIMALADVA 190

Query: 425 DRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +RY D Q PW + K +        +  + + + R L   L+  +P L  +    L     
Sbjct: 191 NRYVDEQAPWVVAKEDGRDADLQAICSMGINLFRVLMTYLKPVLPALTARTEAFLNTE-- 248

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              + S++Q L  G  ++ TF  +F R 
Sbjct: 249 -LTWDSIEQPLL-GHQIN-TFKALFNRI 273


>gi|209559725|ref|YP_002286197.1| valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540926|gb|ACI61502.1| Valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 882

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|94990882|ref|YP_598982.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544390|gb|ABF34438.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 882

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|75909191|ref|YP_323487.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702916|gb|ABA22592.1| valyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 1002

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 134/358 (37%), Gaps = 19/358 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
            + V +     Y +   N   W      ++         +S               N   
Sbjct: 385 PEFVPQRWTKVYRDWLVNLRDWCISRQLWWGHQIPAWYAVSETNGQIT-------DNTPF 437

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              KS  +    ++  F   +++  DP  ++  W  +     +T G+ +      AK++P
Sbjct: 438 VVAKSTNEAWEKAKAQFGENVQLEQDPD-VLDTWFSSGLWPFSTLGWPEQTP-DLAKYYP 495

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
               V G DI+ F    +   A   +  +P               +K+SKS  N IDP+ 
Sbjct: 496 TTTLVTGFDIIFFWVARMTMMAGHFTGQMPFQTVYIHGLVRDENNKKMSKSANNGIDPLL 555

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDY 373
           +I++ G DALRY LVRE+A  G+D   + D  K +  + + +    N +  +   ++ + 
Sbjct: 556 LIDKYGTDALRYTLVREVAGAGQDIRLEYDRKKDESPSVEASRNFANKLWNAARFVMMNL 615

Query: 374 DGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           DG  P     P A   SD  I+S   +V+++    + N  +  A   +   +     D Y
Sbjct: 616 DGQTPGQLGQPNATELSDRWIISRYHQVIKQTTNYIDNYGLGEAAKGIYEFIWGDFCDWY 675

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            +  K    K  +P            V+  +  LL  F+P +  +I+  L    EN  
Sbjct: 676 IELVKSRLQKDADPLSRKAAQQTLAYVLEGILKLLHPFMPHITEEIWQTLTQQPENSS 733



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 22/160 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K+ E   +           H+GHA+E  + D L R+HR+ G + L+  GTD     +   
Sbjct: 37  KDGEPYCVVIPPPNVTGSLHMGHAFESALIDTLVRYHRMQGRNTLWLPGTDHASIAVHTI 96

Query: 59  -AKAAQNAGVTTKVFVDQNSRNFRDMADV----------------LDISYDDFIRTTEKR 101
             K  +  G T +                                +D S + F  T ++ 
Sbjct: 97  LEKQLKAEGKTRQELGRDKFLERSWQWKAESGGTIVNQLRRLGVSVDWSRERF--TLDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                   +  + ++G IY+G Y   +    ++  +D EV
Sbjct: 155 LSKAVAEAFVSLYEEGLIYRGEYLVNWCPATQSAVSDVEV 194


>gi|90962047|ref|YP_535963.1| valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|90821241|gb|ABD99880.1| Valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 886

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 128/345 (37%), Gaps = 31/345 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   E+         R     +     + D  +SR+   W
Sbjct: 360 VESRLSTQWFVKMKPLAEAALKNQETDDRVDFVPPRFEHTFTQWMENVHDWVISRQ-LWW 418

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 419 GHQIPAWYHKETGEIYVGEEAPEDIENWEQDSDVLDTWFSSALWPFSTMGWPDTESPDFK 478

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 479 RYFPTNTLVTGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGNGI 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL    A G+D  +    +    N    N I N     +  +  
Sbjct: 539 DPMDVIDKYGADALRWFLSNGSAPGQDVRFSYTKMDAAWN--FINKIWNASRFVIMNLDS 596

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
           D +  +P    +  +D+ ILS  +  ++++     +     A   + + +     D Y +
Sbjct: 597 DVELSLPEASEWQLADKWILSRLNDTVRDVTRLFDSFEFGEAGRALYNFIWNDFCDWYIE 656

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K   L   +         +   V+ Q+  L+   +P +  KI+
Sbjct: 657 MAK-ENLTGEDEKLKKNTQRILRYVLDQILRLMHPIMPFVTEKIW 700



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +  + +         L +S  YD    T +    
Sbjct: 96  VEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDD 198


>gi|94988916|ref|YP_597017.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992808|ref|YP_600907.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542424|gb|ABF32473.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546316|gb|ABF36363.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 882

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|312864262|ref|ZP_07724496.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100263|gb|EFQ58472.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 883

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 133/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PVEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  K 
Sbjct: 531 PMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNKG 587

Query: 373 YDGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +            A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDVARENVAKVVAGQAGNVTDHWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +I+  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|170077832|ref|YP_001734470.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169885501|gb|ACA99214.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 912

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 83/383 (21%), Positives = 141/383 (36%), Gaps = 61/383 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L++ +   +     ER  +V       L D  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIDPLAQKTLAFLDEENQPNYVPERWRKVYRDWLVKLNDWCISRQ-LW 413

Query: 216 WGIKIP------------------------------------------DDPQYIMYVWID 233
           WG +IP                                           DP  ++  W  
Sbjct: 414 WGHQIPAWYVVSETNGEIQDHTPFIVAHDEAEAKQKAIAAYGADCQLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ DN +    K++P  + V G DI+ F    +   +   +  +P      
Sbjct: 473 SGLWPFSTLGWPDNSE-DFQKYFPNSVLVTGFDIIFFWVARMTMMSSHFTGKIPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                   G+K+SKS  N IDP+ + +  G DALRY L+RE+A        +      + 
Sbjct: 532 HGLVRDENGKKMSKSANNGIDPLLMCDRYGTDALRYTLIREVAGAGQDISLQYDRKTDES 591

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R V M L      D   P        D  ILS   +V+ +  
Sbjct: 592 QSVEASRNFANKLWN-AARFVMMNLDGKTPTDLGRPAMADLELGDRWILSRLHQVIADTH 650

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQL 458
           +N++   +  A   +   +     D Y +  KP    K   D+AS      +   V+  +
Sbjct: 651 KNLEGYGLGEAAKALYEFIWGDFCDWYIELVKPRLYAKEAQDQASRTVAQQILAWVLEDI 710

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             LL  F+P +  +I+  L  AD
Sbjct: 711 LKLLHPFMPHITEEIWQTLTQAD 733



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA+   + D + R+HR+ G +VL   GTD     +   
Sbjct: 37  KKGDPFCIVIPPPNVTGKLHMGHAFNTSLIDTVVRYHRMKGENVLCLPGTDHASIAVQTL 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++     +    L +S D      T ++   
Sbjct: 97  VEKQIKAEGKTRYDLGREKFLEKAWEWKAESGGAIINQLKRLGLSADWTRERFTLDENLC 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
           +  +  +  + ++G IY+G Y   +    ++  +D EV  K  DG  ++ ++
Sbjct: 157 EAVKKAFITLYEEGLIYRGNYLVNWCPESQSAVSDLEVENKEIDGHLWHFRY 208


>gi|317123025|ref|YP_004103028.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593005|gb|ADU52301.1| valyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 973

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 142/403 (35%), Gaps = 72/403 (17%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                          ++ +    +F R+    +  +    +    I+P  R   V     
Sbjct: 385 PHHHSVGVCYRCGTVIEPLVSRQWFIRMKPLAEPAMEAVRTGRTRIVPE-RFTRVYLHWL 443

Query: 202 SGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWID 233
             ++D  +SR+   WG +IP                               + ++  W  
Sbjct: 444 ENVRDWCISRQ-IWWGHRIPAWYCQRCGETVVAREDPERCPRCGSAELHQDEDVLDTWFS 502

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D       +F+P  + V G DIL F    +         ++P    + 
Sbjct: 503 SALWPFSTLGWPDKDSPDLRRFYPTSVLVTGYDILFFWVARMMVMGLEFMGDVPFRTVLL 562

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  KG+K+SKS GNV+DP+EVI++ G DALR+ LV  +A G D  +  +  +   N
Sbjct: 563 HGLVRDAKGQKMSKSRGNVVDPLEVIDKYGADALRFTLVTGLAPGNDARFSWERAEASRN 622

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              AN + N  +R V M L+D+D     P     +D  IL+    V  E++  ++   + 
Sbjct: 623 --FANKLWN-AARFVLMNLQDFDPARGEPERDNAADRWILARLDAVTAEVQRLLEAFELG 679

Query: 412 RALAQVISLVSE--VDRYFDAQKPW------ELKKTNPDRAS------------------ 445
            A   + + + +   D Y +  KP        L  T                        
Sbjct: 680 EAARALYNFIWDEFCDWYIELVKPRLAGAAGRLDPTGGVHRQAEPAHAEAAATGGNAAGA 739

Query: 446 -----------TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                         Y   +V+ Q   LL  F+P ++  ++  L
Sbjct: 740 RAGADAAASRYAAQYTLWQVLEQTLRLLHPFMPFISETVWQKL 782



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 51/151 (33%), Gaps = 19/151 (12%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT-- 69
                    HIGHA    + D+LAR+HR+ G   L+  GTD  G       +        
Sbjct: 89  PPPNVTGNLHIGHALNNTMQDILARWHRMQGDVTLWVPGTDHAGIATQHVVEVRLAKEEG 148

Query: 70  ---------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKK 112
                            + +Q   N       L   + +D    T ++      R ++ +
Sbjct: 149 LRRQDLGRERFLERVWAWKNQYEANILGQLRRLGASVDWDRLRFTMDEGCSRAVREVFVR 208

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +KG IY+G Y   +         D EV  
Sbjct: 209 LYEKGLIYRGDYMVNWCPVCHTALADIEVEH 239


>gi|76786857|ref|YP_329179.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|90108440|sp|Q3K2S4|SYV_STRA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76561914|gb|ABA44498.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 884

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVVTRSVLLYTLDQILRLLHPIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+ +   +     + +S D      T ++    
Sbjct: 95  EERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G IY+G +   +        +D EV  
Sbjct: 155 AVRKVFVDLYNRGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|319744516|gb|EFV96871.1| valine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 883

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVVTRSVLLYTLDQILRLLHPIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  TEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDDGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|139473421|ref|YP_001128137.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271668|emb|CAM29901.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 882

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVVH 192


>gi|71911105|ref|YP_282655.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71853887|gb|AAZ51910.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 801

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 271 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 329

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 330 GHQIPAWYNAEGEIYVGEEAPEGDDWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 389

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 390 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 449

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 450 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 506

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 507 TLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 566

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 567 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 618


>gi|15675460|ref|NP_269634.1| valyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533485|sp|Q99YS1|SYV_STRP1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13622652|gb|AAK34355.1| putative valine-tRNA ligase [Streptococcus pyogenes M1 GAS]
          Length = 882

 Score =  193 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDDWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|77406180|ref|ZP_00783251.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175220|gb|EAO78018.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 883

 Score =  193 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQ 700



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+ +   +     + +S D      T ++    
Sbjct: 95  EERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G IY+G +   +        +D EV  
Sbjct: 155 AVRKVFVDLYNRGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|255308304|ref|ZP_05352475.1| valyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 888

 Score =  192 bits (488), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 158/403 (39%), Gaps = 42/403 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++   +    L+++ Y    + +    G  Y   H  V+    E +F ++    
Sbjct: 313 YEGMDRFECRKAIVVDLKEQGYLIKIKEHNHNVGTCYR-CHTVVEPRLSEQWFVKMEELA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   +      +P +     + +++  ++D  +SR+ +                   
Sbjct: 372 KPAIDILKKGELEFVPDKFDKTYLQWLE-NIRDWCISRQLWWGHQIPAYYCQECGEIVVA 430

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ +  +     ++P  + V G D
Sbjct: 431 RKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALD-YYYPTSVLVTGYD 489

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F  +    A +   N      V  HG +   +G K+SKSLGN IDP+E+IE+ G DA
Sbjct: 490 IIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADA 549

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+ L    + G D  +  + ++     + AN + N  SR V M + +      T     
Sbjct: 550 LRFTLTTGNSPGNDMRFYMERVE--FARNFANKLWN-ASRFVFMNIDEDIIKNMTRESVK 606

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              T +D+ I+S  + +++E   NM    +  AL ++         D Y +  KP  L  
Sbjct: 607 EDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  S  LY    V+ ++  LL  ++P +  +I+  L   +
Sbjct: 666 EDANAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVE 708



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 24/174 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+DG +  +  GTD          
Sbjct: 36  DKKPFTIMMPPPNITGQLHMGHALDHTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKV 95

Query: 63  QNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                         F  + S   + + D  D   + F  T ++ 
Sbjct: 96  VERIKKQEGKTKYEIGREEFLKRAWEWKDEFGGKISNQLKQLGDSCDWDKERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++     +  + +KG IY+G     +    +   +D EV ++  DG +Y+ ++
Sbjct: 154 CNEAVIEFFVSLYEKGHIYRGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKY 207


>gi|22536625|ref|NP_687476.1| valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76797752|ref|ZP_00780019.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|81455031|sp|Q8E1B5|SYV_STRA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22533463|gb|AAM99348.1|AE014212_7 valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586900|gb|EAO63391.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 883

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQ 700



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  TEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|116878593|ref|YP_357724.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|114843229|gb|ABA89554.2| valyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 885

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 137/373 (36%), Gaps = 16/373 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + ++  G+ Y+        +  + Y N   + + A       Q   +    E+ YF  + 
Sbjct: 338 EHLNAVGECYRCKTVIEPYMSLQWYVNVQPLAEKAIEAVQTGQTRIIPQQWEKTYFEWMF 397

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +D  +S         +P            S     + S      G         ++  
Sbjct: 398 NIRDWCISRQIWWGHR-IPAWFCAACNEVTVSREDPTACS----HCGATELRQETDVLDT 452

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D     + KF+P    V G DIL F    +          +P   
Sbjct: 453 WFSSALWPFSTMGWPDKTVALE-KFYPTSCLVTGFDILFFWVARMMMMGLKFMGQVPFKD 511

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                     +G+K+SKS GNVIDP+ VI+E G DA R+ L    A G+D     D +  
Sbjct: 512 VYIHALVRDAQGQKMSKSKGNVIDPLTVIDEYGTDAFRFTLAAFAAQGRDVKLSVDRIAG 571

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQ 406
               +  N + N  SR   M L+D+D           T ++  IL+    V  E  + ++
Sbjct: 572 --YRNFVNKLWN-ASRFALMNLEDFDPSGIDLDDCQLTLAERWILTRLIDVAAETGKALE 628

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A + + +       D Y +  K  +L   +  R +T   V   V+ QL  LL  
Sbjct: 629 EYKFNEAASVLYAFTWHEFCDWYIELSKD-DLYGEDAARKATSQAVLYTVLEQLLRLLHP 687

Query: 465 FVPKLANKIFDIL 477
            +P +  +I+  L
Sbjct: 688 LMPFVTEEIWQAL 700



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 18/172 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA    + D+LAR+ R+DG +VL+  GTD  G       +
Sbjct: 36  KNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAGIATQNVVE 95

Query: 64  NAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   +  ++     +    L  S D      T ++     
Sbjct: 96  KQLAAEGSSRHDLGREGFVDRVWQWRTESGGQIINQLKRLGASCDWERERFTMDEGLSRA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            R ++  + ++G IY+      +  R     +D EV              PV
Sbjct: 156 VREVFVTLYEEGLIYRDNRLINWCPRCHTALSDLEVEHQDQKGNLWHLRYPV 207


>gi|260654939|ref|ZP_05860427.1| valine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630254|gb|EEX48448.1| valine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 891

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 140/396 (35%), Gaps = 41/396 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            +  +    E      G  Y   +  V+    E +F +++    K +   +      +P 
Sbjct: 334 EEGGFLEKIEDLPHQVGHCYR-CNTVVEPYLSEQWFVKVAPLAQKGVQASKEGRIRWIPN 392

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
           +       ++  G++D  +SR+   WG +IP                             
Sbjct: 393 QWDKTYYQWMD-GVRDWCISRQ-LWWGHRIPAWTCGDCGHLTVSETDPTVCPKCGSHHLH 450

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ ++    K +++P  + V   DI+ F    +       
Sbjct: 451 QDEDVLDTWFSSALWPFSTLGWPEDTKELK-RYYPTSVLVTAFDIIFFWVSRMIMMGLEF 509

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                  K V+ H  +  + G+K+SKS GN IDP+++I + G DALR+ +      G+D 
Sbjct: 510 MDGREPFKDVYIHALVRDEHGQKMSKSKGNGIDPLDMIGKFGADALRFTVAYLTVQGRDI 569

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVL 398
              +  ++        N + N  SR   M L D D    P        D  +LS  ++V 
Sbjct: 570 LLGESRIE--TCKRFINKLWN-ASRFALMNLGDEDCEGLPQLSKMRLHDRWLLSRLAQVE 626

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + + E M    +  A   +   V     D Y +  KP         R+     V     +
Sbjct: 627 KSVAELMDEYDVGEAARMIYDFVWADLCDWYIEMAKPALYGDEGDGRSKASRQVLNRAFK 686

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            +  LL  F P +  +++      +     +S    
Sbjct: 687 DVLRLLHPFTPFVTEELWHAFAFGERPMELESWPDG 722



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GHAY+  + DVL R+ R  G +VL+  GTD  G       
Sbjct: 39  TRETFTIVLPPPNVTGALHVGHAYDHTLQDVLCRYKRARGYNVLWLPGTDHAGIATQNVV 98

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           + A                        K +  +     + + D  D   + F  T ++  
Sbjct: 99  ERALAKQGLKRQDLGREAFIEKVWEWKKEYGGRIVSQMKRLGDSCDWDRERF--TMDEGL 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++ ++ +KG IY+G Y   +  R     +D EV  
Sbjct: 157 SKAVRAVFARLYEKGLIYRGKYIVNWCPRCHTALSDIEVEH 197


>gi|254976852|ref|ZP_05273324.1| valyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094239|ref|ZP_05323717.1| valyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315992|ref|ZP_05357575.1| valyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518649|ref|ZP_05386325.1| valyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651771|ref|ZP_05398673.1| valyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684797|ref|YP_003216082.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688455|ref|YP_003219589.1| valyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260210960|emb|CBA66224.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214472|emb|CBE06944.1| valyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 888

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 145/374 (38%), Gaps = 41/374 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +       H  V+    E +F ++       +   +      +P +     + +++ 
Sbjct: 341 HNHNVGTCYRCHTVVEPRLSEQWFVKMEELAKPAIDILKKGELEFVPDKFDKTYLQWLE- 399

Query: 203 GLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDAL 235
            ++D  +SR+ +                             G       +  +  W  + 
Sbjct: 400 NIRDWCISRQLWWGHQIPAYYCQECGEIVVARKMPDKCPKCGSTHFKQDEDALDTWFSSA 459

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP-AFLLSANLPLPKKVFSHG 294
               +T G+ +  +     ++P  + V G DI+ F  +    A +   N      V  HG
Sbjct: 460 LWPFSTLGWPNKTEALD-YYYPTSVLVTGYDIIFFWVVRMAFAGMFCMNEKPFDHVLVHG 518

Query: 295 FILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +   +G K+SKSLGN IDP+E+IE+ G DALR+ L    + G D  +  + ++     +
Sbjct: 519 LVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSPGNDMRFYMERVE--FARN 576

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQL 409
            AN + N  SR V M + +      T        T +D+ I+S  + +++E   NM    
Sbjct: 577 FANKLWN-ASRFVFMNIDEDIIKNMTRESVKEDLTLADKWIISRANNIVKEATNNMDKFD 635

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  AL ++         D Y +  KP  L   + +  S  LY    V+ ++  LL  ++P
Sbjct: 636 LGIALQKIYDFTWSEYCDWYIEMVKP-RLYGEDANAKSAALYTLTYVLEKILKLLHPYMP 694

Query: 468 KLANKIFDILFVAD 481
            +  +I+  L   +
Sbjct: 695 FITEEIYTHLPTVE 708



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 24/174 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+DG +  +  GTD          
Sbjct: 36  DKKPFTIMMPPPNITGQLHMGHALDHTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKV 95

Query: 63  QNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                         F  + S   + + D  D   + F  T ++ 
Sbjct: 96  VERIKKQEGKTKYEIGREEFLKRAWEWKDEFGGKISNQLKQLGDSCDWDKERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++     +  + +KG IY+G     +    +   +D EV ++  DG +Y+ ++
Sbjct: 154 CNEAVIEFFVSLYEKGHIYRGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKY 207


>gi|225019373|ref|ZP_03708565.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
 gi|224948004|gb|EEG29213.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
          Length = 883

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/410 (20%), Positives = 148/410 (36%), Gaps = 41/410 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   +    L    +  + E +    GQ Y      V+    + +F ++    
Sbjct: 321 YSGMDRYEARKAIVADLEAGGFLVETEDHAHNVGQCYRCGTT-VEPRVSKQWFVKMEPLA 379

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------- 220
              +    S     +P  R +++       +KD  +SR+   WG +I             
Sbjct: 380 KPSIEAVRSGETKFVPE-RFDKIFYHWMENIKDWCISRQ-LWWGHRIPAYYCDDCGELIV 437

Query: 221 ---------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              +  +  W  +     +T G+ +  +  K  F+P    V G 
Sbjct: 438 SKTAPETCPHCGGHSFKQDEDTLDTWFSSALWPFSTLGWPNQTEDLK-YFYPTSTLVTGY 496

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + + A   +   P             +G K+SKSLGN IDP+EVI E G D
Sbjct: 497 DIIFFWVCRMIFSAVEHTGQAPFEHVFIHGLVRDSEGRKMSKSLGNGIDPLEVIGEYGAD 556

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ L      G D  Y  + +K   N   AN + N  +R + M + D    +  P   
Sbjct: 557 ALRFMLANGTNAGNDMRYSDEKVKAARN--FANKLWN-ATRFIMMNISDEVDTVELPSTL 613

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T  D+ +L+  + +++E+ +N++   +     ++   +     D Y +  K         
Sbjct: 614 TIEDKWVLTQLNDLVKEMTDNLEKFELSVTSQKIYDFIWNILCDWYIELTKTRLQAGGET 673

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                   V V V+     LL  F+P +  +I+  +    E+       +
Sbjct: 674 SL--NAQKVLVYVMANTLKLLHPFMPFITEEIWQAIPHDAESIMVSRWPE 721



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 18/172 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++   I         Q H+GHA +  + D+L R+ R+ G   L+  GTD          
Sbjct: 45  EKKPYTIVIPPPNITGQLHMGHALDETLQDILIRWRRMQGYAALWVPGTDHASIATEAKI 104

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      + ++      +    L  S D      T ++   +
Sbjct: 105 VEAMKQEGLTKEDLGRDGFLKRAWEWKEKYGGRIVEQLKKLGSSCDWSRERFTLDEGCSE 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
             + ++  + +KG IY+G     +        +D EV       ++     P
Sbjct: 165 AVQEVFINLYNKGLIYRGERIINWCPHCCTSISDAEVEYAEQQGHFWHLRYP 216


>gi|255102404|ref|ZP_05331381.1| valyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 888

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 158/403 (39%), Gaps = 42/403 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++   +    L+++ Y    + +    G  Y   H  V+    E +F ++    
Sbjct: 313 YEGMDRFECRKAIVADLKEQGYLIKIKEHNHNVGTCYR-CHTVVEPRLSEQWFVKMEELA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   +      +P +     + +++  ++D  +SR+ +                   
Sbjct: 372 KPAIDILKKGELEFVPDKFDKTYLQWLE-NIRDWCISRQLWWGHQIPAYYCQECGEIVVA 430

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ +  +     ++P  + V G D
Sbjct: 431 RKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALD-YYYPTSVLVTGYD 489

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F  +    A +   N      V  HG +   +G K+SKSLGN IDP+E+IE+ G DA
Sbjct: 490 IIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADA 549

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+ L    + G D  +  + ++     + AN + N  SR V M + +      T     
Sbjct: 550 LRFTLTTGNSPGNDMRFYMERVE--FARNFANKLWN-ASRFVFMNIDEDIIKNMTRESVK 606

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              T +D+ I+S  + +++E   NM    +  AL ++         D Y +  KP  L  
Sbjct: 607 EDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  S  LY    V+ ++  LL  ++P +  +I+  L   +
Sbjct: 666 EDANAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVE 708



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 24/174 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+DG +  +  GTD          
Sbjct: 36  DKKPFTIMMPPPNITGQLHMGHALDHTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKV 95

Query: 63  QNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                         F  + S   + + D  D   + F  T ++ 
Sbjct: 96  VERIKKQEGKTKYEIGREEFLKRAWEWKDEFGGKISNQLKQLGDSCDWDKERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++     +  + +KG IY+G     +    +   +D EV ++  DG +Y+ ++
Sbjct: 154 CNEAVIEFFVSLYEKGHIYRGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKY 207


>gi|317132442|ref|YP_004091756.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470421|gb|ADU27025.1| valyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 872

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 141/379 (37%), Gaps = 42/379 (11%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           Y         +       H  ++    + +F R+       +          +P  R  +
Sbjct: 332 YLVRVEPHTHNVGTCYRCHTTIEPWISKQWFVRMKELAAPAIEAVRKGETRFVPE-RFEK 390

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYI 227
           +       ++D  +SR+   WG +IP                               +  
Sbjct: 391 IYFHWMENIRDWCVSRQ-LWWGHRIPAWYCADCGETVVSRETPTVCPKCGGTHLSQDEDT 449

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
              W  +     +T G+ +      A F+P  + V G DI+ F    + +     +   P
Sbjct: 450 FDTWFSSALWPFSTLGWPEKTP-ELAYFYPTSVLVTGYDIIFFWVARMIFSGIAQTGQTP 508

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +        KG K+SKSLGN +DP+EVI+  G DALR+ L    + G D  +  + 
Sbjct: 509 FHTVLIHGLVRDAKGRKMSKSLGNGVDPLEVIKSSGADALRFTLATGNSPGNDTRFLPER 568

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           ++   N   AN I N  +R + M +   +  +PT       D+ ILS  + +++++ EN+
Sbjct: 569 VESSRN--FANKIWN-AARFILMNISGSETGLPT--ELEIEDKWILSKLNTLIRDVTENL 623

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +   +  A+ ++   + +   D Y +  K         + A+    V V V+     LL 
Sbjct: 624 ERFELGVAVQKLYDFLWDSFCDWYIELSKSRLQAGG--ENAAAACRVLVWVMEHTLRLLH 681

Query: 464 AFVPKLANKIFDILFVADE 482
             +P +  +I+  L    E
Sbjct: 682 PVMPFITEEIWQTLPHEGE 700



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I         + H+GHA+E    D+L RF R+ G + L+  GTD          
Sbjct: 35  DKTPFTIVMPPPNITGKLHMGHAFEDTQQDILIRFKRMQGFEALWLPGTDHASIATEAKI 94

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
             A                        + +        + +    D + + F  T ++  
Sbjct: 95  VAAMAKEGLSKQDTGRDGFLERAWKWKEEYGGNIVAQLKKLGASCDWARERF--TMDEGC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++ ++ ++G IY+G     +    +   +D+EV        +     P+
Sbjct: 153 STAVREVFVRLYEQGLIYRGERIVNWCPHCKTTISDEEVEYEEQQGSFWHLRYPL 207


>gi|90101539|sp|Q3A253|SYV_PELCD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 899

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 137/373 (36%), Gaps = 16/373 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + ++  G+ Y+        +  + Y N   + + A       Q   +    E+ YF  + 
Sbjct: 352 EHLNAVGECYRCKTVIEPYMSLQWYVNVQPLAEKAIEAVQTGQTRIIPQQWEKTYFEWMF 411

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +D  +S         +P            S     + S      G         ++  
Sbjct: 412 NIRDWCISRQIWWGHR-IPAWFCAACNEVTVSREDPTACS----HCGATELRQETDVLDT 466

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D     + KF+P    V G DIL F    +          +P   
Sbjct: 467 WFSSALWPFSTMGWPDKTVALE-KFYPTSCLVTGFDILFFWVARMMMMGLKFMGQVPFKD 525

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                     +G+K+SKS GNVIDP+ VI+E G DA R+ L    A G+D     D +  
Sbjct: 526 VYIHALVRDAQGQKMSKSKGNVIDPLTVIDEYGTDAFRFTLAAFAAQGRDVKLSVDRIAG 585

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQ 406
               +  N + N  SR   M L+D+D           T ++  IL+    V  E  + ++
Sbjct: 586 --YRNFVNKLWN-ASRFALMNLEDFDPSGIDLDDCQLTLAERWILTRLIDVAAETGKALE 642

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A + + +       D Y +  K  +L   +  R +T   V   V+ QL  LL  
Sbjct: 643 EYKFNEAASVLYAFTWHEFCDWYIELSKD-DLYGEDAARKATSQAVLYTVLEQLLRLLHP 701

Query: 465 FVPKLANKIFDIL 477
            +P +  +I+  L
Sbjct: 702 LMPFVTEEIWQAL 714



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 18/172 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA    + D+LAR+ R+DG +VL+  GTD  G       +
Sbjct: 50  KNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAGIATQNVVE 109

Query: 64  NAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   +  ++     +    L  S D      T ++     
Sbjct: 110 KQLAAEGSSRHDLGREGFVDRVWQWRTESGGQIINQLKRLGASCDWERERFTMDEGLSRA 169

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            R ++  + ++G IY+      +  R     +D EV              PV
Sbjct: 170 VREVFVTLYEEGLIYRDNRLINWCPRCHTALSDLEVEHQDQKGNLWHLRYPV 221


>gi|116333862|ref|YP_795389.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099209|gb|ABJ64358.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 888

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 130/355 (36%), Gaps = 33/355 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    D+ +   +         ER     +     + D  +SR+   W
Sbjct: 362 VEARLSTQWFVKMKPLADEAIKNQQGDDAVNFVPERFENTFTQWMDNVHDWVISRQ-LWW 420

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 421 GHRIPAWYNKQTGEVYVDTKAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDEDSADF 479

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 480 KRYFPTSTLVTGYDIIFFWVSRMMFQSLEFTGKRPFKNVLLHGLIRDEEGRKMSKSLGNG 539

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVI++ G DALR+FL      G+D  +    +    N    N I N     +  + 
Sbjct: 540 IDPMEVIDKYGADALRWFLSTGSTAGQDVRFSYTKMDAAWN--FINKIWNASRFVIMNLG 597

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
                ++P    +  +D+ ILS  +  ++ + E         A   + + +     D Y 
Sbjct: 598 DKTQPVLPAAETWDLTDKWILSRLNDTVKHVTEMFDKFEFGEAGRALYNFIWNDFCDWYI 657

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  K   L   +    +    +   V+ Q   LLQ  +P +   I+  +    ++
Sbjct: 658 EMSK-EVLTGDDETAKANKQDLLAYVLDQTLRLLQPIMPFVTEAIWQAMPHDGQS 711



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D+L R  R+ G D L+  G D  G      
Sbjct: 37  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +         + +S D      T +    
Sbjct: 97  VEAKLREQGISRYDLGREKFVEKVWEWKDEYADTIHKQWAKMGLSLDYSRERFTLDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           D  + ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 157 DAVKKVFVTLYKKGLIYRGEYIINWDPQARTALSDIEVIHKDD 199


>gi|304385268|ref|ZP_07367613.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328475|gb|EFL95696.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 887

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 78/359 (21%), Positives = 129/359 (35%), Gaps = 37/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       L+  ++  +     ER             D  +SR+   W
Sbjct: 361 VESRLSTQWFVKMDKLAKMSLANQDTDDKVNFIPERFEHTFKQWMENAHDWVISRQ-LWW 419

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     TT G+ D      
Sbjct: 420 GHQIPAWYHKETGEVYVGEEAPKDVENWEQDPD-VLDTWFSSALWPFTTMGWPDENAADF 478

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 479 KRYFPTSTLVTGYDIIFFWVARMIFQSLKFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNG 538

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +    +    N    N I N  SR V M L
Sbjct: 539 IDPMDVIDKYGADALRWFLSNGSTAGQDLRFSYTKMDAAWN--FINKIWN-ASRYVIMNL 595

Query: 371 KDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
              D    P       +D  ILS  +  ++++           A   + + + +   D Y
Sbjct: 596 DQVDKPQLPALNELNLADRWILSRLNHTVEQVTHFFDVYDFGEAGRALYTFIWDDFCDWY 655

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   +         V   V+ Q   LL   +P +  KI+  L +  E    
Sbjct: 656 IEMSK-EILNGDDQTAQVNTQNVLAYVLDQTLRLLHPVMPFVTEKIW--LSMPHEGESL 711



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D ++  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTVWVPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +         + +S D      T ++   
Sbjct: 96  VEAKLREQGVSRYDLGRDKFIDKVWEWKDEYADTIHQQWAKMGLSLDYGRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVTLYNEGLIYRGEYIINWDPQARTALSDIEVEHQDD 198


>gi|126700875|ref|YP_001089772.1| valyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252312|emb|CAJ70153.1| valyl-tRNA synthetase [Clostridium difficile]
          Length = 888

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 157/403 (38%), Gaps = 42/403 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++   +    L+++ Y    + +    G  Y   H  V+    E +F ++    
Sbjct: 313 YEGMDRFECRKAIVADLKEQGYLIKIKEHNHNVGTCYR-CHTVVEPRLSEQWFVKMEELA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   +      +P +     + +++  ++D  +SR+ +                   
Sbjct: 372 KPAIDILKKGELEFVPDKFDKTYLQWLE-NIRDWCISRQLWWGHQIPAYYCQECGEIVVA 430

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ +  +     ++P  + V G D
Sbjct: 431 RKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALD-YYYPTSVLVTGYD 489

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F  +    A +   N      V  HG +   +G K+SKSLGN IDP+E+IE+ G DA
Sbjct: 490 IIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADA 549

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+ L    +   D  +  + ++     + AN + N  SR V M + +      T     
Sbjct: 550 LRFTLTTGNSPENDMRFYMERVE--FARNFANKLWN-ASRFVFMNIDEDIIKNMTRESVK 606

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              T +D+ I+S  + +++E   NM    +  AL ++         D Y +  KP  L  
Sbjct: 607 EDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  S  LY    V+ ++  LL  ++P +  +I+  L   +
Sbjct: 666 EDANAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVE 708



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 24/174 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+DG +  +  GTD          
Sbjct: 36  DKKPFTIMMPPPNITGQLHMGHALDHTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKV 95

Query: 63  QNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                         F  + S   + + D  D   + F  T ++ 
Sbjct: 96  VERIKKQEGKTKYEIGREEFLKRAWEWKDEFGGKISNQLKQLGDSCDWDKERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++     +  + +KG IY+G     +    +   +D EV ++  DG +Y+ ++
Sbjct: 154 CNEAVIEFFVSLYEKGHIYRGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKY 207


>gi|19746507|ref|NP_607643.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632599|sp|Q8P040|SYV_STRP8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19748714|gb|AAL98142.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 882

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 SLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|149005678|ref|ZP_01829417.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762618|gb|EDK69578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332077000|gb|EGI87462.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 883

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 133/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|306819650|ref|ZP_07453313.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552295|gb|EFM40223.1| valine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 882

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 141/372 (37%), Gaps = 36/372 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +    +  V+ M  + +F ++ A     +   +     ++P       +++++ 
Sbjct: 338 HSHNVGHCYRCNTVVEPMTSKQWFVKMDALAKPAIEVLKDKELNLVPSRFDKIYVNWLE- 396

Query: 203 GLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDAL 235
            ++D  +SR+ +                             G K     + ++  W  + 
Sbjct: 397 NIRDWCISRQLWWGHQIPAYYCDDCGHMQVSKSKVEVCEKCGSKHIHQDEDVLDTWFSSA 456

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              ++T GY +  +     F+P    V G DI+ F    + + +  ++   P        
Sbjct: 457 LWPMSTLGYPEKTE-EFEHFFPTSTLVTGYDIIFFWVIRMVFSSLYITDKSPFKDVFIHG 515

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                +G K+SKSLGN IDP+EVI+  G DALR+ L    + G D  Y  + +    N  
Sbjct: 516 LVRDSQGRKMSKSLGNGIDPLEVIDSFGADALRFTLATGNSPGNDMRYYDERVTASRN-- 573

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            AN I N     +  + +               +D+ ILS  + V +E+ ENM    +  
Sbjct: 574 FANKIWNSARFILMNLDEGIALSQEEIEKNLEIADKWILSRANSVAREMTENMDKYELGI 633

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+ +V         D Y +  K       +       LY   +V++ +  LL  F+P + 
Sbjct: 634 AVQKVYDFAWNEFCDWYIEMVKSRLYNYEDKTSKQVALYTLKKVLKDILKLLHPFMPFVT 693

Query: 471 NKIFDILFVADE 482
            +I++     +E
Sbjct: 694 EEIWEKFEDKEE 705



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 26/175 (14%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M   +K Y    +  PN   Q H+GHA +  + D+L RF R+ G D L+  GTD      
Sbjct: 30  MTNPDKTYCIV-LPPPNITGQLHMGHALDHTLQDILIRFKRMQGYDTLWQPGTDHASIAT 88

Query: 59  AKAAQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRT 97
                                           + F  +     + + D  D S + F  T
Sbjct: 89  EVKVVEKIKNEEGKSKEEIGREEFLKRAWAWKEEFGGKIVSQMKKLGDSCDWSRERF--T 146

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
            ++  ++     + K+ + G IY+G     +    +   +D EV     G ++  
Sbjct: 147 MDEGCNEAVNEFFVKLYEDGYIYRGNRIINWCPDCKTSLSDAEVDHEETGGHFYH 201


>gi|225858409|ref|YP_002739919.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225720884|gb|ACO16738.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 883

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQGEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGCKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 --DYDGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             D      T  A  E+    D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|300214744|gb|ADJ79160.1| Valyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 886

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 128/345 (37%), Gaps = 31/345 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   E+         R     +     + D  +SR+   W
Sbjct: 360 VESRLSTQWFVKMKPLAEAALKNQETDDRVDFVPPRFEHTFTQWMENVHDWVISRQ-LWW 418

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 419 GHQIPAWYHKETGEIYVGEEAPEDIENWEQDSDVLDTWFSSALWSFSTMGWPDTESPDFK 478

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 479 RYFPTNTLVTGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGNGI 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL    A G+D  +    +    N    N I N     +  +  
Sbjct: 539 DPMDVIDKYGADALRWFLSNGSAPGQDVRFSYTKMDAAWN--FINKIWNASRFVIMNLDS 596

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
           D +  +P    +  +D+ ILS  +  ++++     +     A   + + +     D Y +
Sbjct: 597 DVELSLPEASEWQLADKWILSRLNDTVRDVTRLFDSFEFGEAGRALYNFIWNDFCDWYIE 656

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             K   L   +         +   V+ Q+  L+   +P +  KI+
Sbjct: 657 MAK-ENLTGEDEKLKKNTQCILRYVLDQILRLMHPIMPFVTEKIW 700



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 36  KEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +  + +         L +S  YD    T +    
Sbjct: 96  VEARLAEDGISRYDLGREKFVEKVWEWKGEYADIIHQQWAKLGLSLDYDRERFTLDDGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVTLYKKGLIYRGEYIINWDPKARTALSDIEVIHKDD 198


>gi|71903958|ref|YP_280761.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|90108441|sp|Q48SA4|SYV_STRPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71803053|gb|AAX72406.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 882

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDNRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKIVRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|195978584|ref|YP_002123828.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975289|gb|ACG62815.1| valyl-tRNA synthetase ValS [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 883

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 131/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGDMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ E+        A   + + + E  
Sbjct: 589 TLEQATANVEQVVSGAAGNVTDRWILHNLNETIGKVTESFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKR 101
            +                        + D+ +   ++    L +S     D F  T ++ 
Sbjct: 94  VEERLREQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSLDYARDRF--TLDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 152 LSKAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|94994796|ref|YP_602894.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548304|gb|ABF38350.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 882

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKIVRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLRGQGITRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|255657212|ref|ZP_05402621.1| valyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451948|ref|ZP_06893663.1| valine--tRNA ligase [Clostridium difficile NAP08]
 gi|296259139|gb|EFH06019.1| valine--tRNA ligase [Clostridium difficile NAP08]
          Length = 888

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 158/403 (39%), Gaps = 42/403 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D ++   +    L+++ Y    + +    G  Y   H  V+    E +F ++    
Sbjct: 313 YEGMDRFECRKAIVADLKEQGYLIKIKEHNHNVGTCYR-CHTVVEPRLSEQWFVKMEELA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
              +   +      +P +     + +++  ++D  +SR+ +                   
Sbjct: 372 KPAIDILKKGELEFVPEKFDKTYLQWLE-NIRDWCISRQLWWGHQIPAYYCQECGEIVVA 430

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G       +  +  W  +     +T G+ +  +     ++P  + V G D
Sbjct: 431 RKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALD-YYYPTSVLVTGYD 489

Query: 267 ILRFHAIYWP-AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F  +    A +   N      V  HG +   +G K+SKSLGN IDP+E+IE+ G DA
Sbjct: 490 IIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADA 549

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----P 380
           LR+ L    + G D  +  + ++     + AN + N  SR V M + +      T     
Sbjct: 550 LRFTLTTGNSPGNDMRFYMERVE--FARNFANKLWN-ASRFVFMNIDEDIIKNMTRESVK 606

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              T +D+ I+S  + +++E   NM    +  AL ++         D Y +  KP  L  
Sbjct: 607 EDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVKP-RLYG 665

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  S  LY    V+ ++  LL  ++P +  +I+  L   +
Sbjct: 666 EDTNAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVE 708



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 24/174 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D+L R+ R+DG +  +  GTD          
Sbjct: 36  DKKPFTIMMPPPNITGQLHMGHALDHTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKV 95

Query: 63  QNAGV---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                         F  + S   + + D  D   + F  T ++ 
Sbjct: 96  VERIKKQEGKTKYEIGREEFLKRAWEWKDEFGGKISNQLKQLGDSCDWDKERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
            ++     +  + +KG IY+G     +    +   +D EV ++  DG +Y+ ++
Sbjct: 154 CNEAVIEFFVSLYEKGHIYRGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKY 207


>gi|77412415|ref|ZP_00788722.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161529|gb|EAO72533.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 884

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N +       V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEEEKVVTRSVLLYTLDQILRLLHPIMPFVTEEIFGQ 700



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  TEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|21910809|ref|NP_665077.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895501|ref|NP_801851.1| valyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759036|sp|Q8K6M9|SYV_STRP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21905014|gb|AAM79880.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810747|dbj|BAC63684.1| putative valine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 882

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 127/353 (35%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQTLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLRGQGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|312870463|ref|ZP_07730583.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094020|gb|EFQ52344.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 883

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 131/348 (37%), Gaps = 31/348 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +  L   ++        ER     +     + D  +SR+   W
Sbjct: 358 VEARLSTQWFVKMKPLAEMALKNQQTDDRVNFIPERFEHTFTQWMENIHDWVISRQ-LWW 416

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        +    ++  W  +     +T G+ D       
Sbjct: 417 GHRIPAWYNKQTGEVYVGMEAPKDAENWEQDNDVLDTWFSSALWPFSTMGWPDTDSADFK 476

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN I
Sbjct: 477 RYFPTNTLVTGYDIIFFWVSRMIFQSLEFTGKAPFKNVLLHGLIRDEQGRKMSKSLGNGI 536

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ GVDALR+FL+     G+D  +    +    N    N I N     +  + +
Sbjct: 537 DPMDVIKKYGVDALRWFLITGSTPGQDIRFSYIKMDAAWN--FINKIWNASRYVIMNLGE 594

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
               ++P    +  +D  ILS  +  ++++ E  +          + + +     D Y +
Sbjct: 595 MPAPVLPAKEKWDLADRWILSRLNATIEQVTEMSEKFEFGEVGRALYNFIWNDFCDWYIE 654

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K  +L     +  +    +   V+ Q   LL   +P +  K++  +
Sbjct: 655 MTK-EKLNNGTAEEKADTKNILGYVLDQTLKLLHPIMPFVTEKLWQSM 701



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G DVL+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGYDVLWIPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + D+ +         + IS  YD    T ++  +
Sbjct: 94  VEARLRKQGISRYDLGREKFVQQVWDWKDEYADIIHQQWAKMGISVDYDRERFTLDEGLN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  +  KG IY+G Y   +  +     +D EV    D
Sbjct: 154 KAVRKVFVDLYKKGLIYRGTYIINWDPQARTALSDIEVVHKDD 196


>gi|322388969|ref|ZP_08062540.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144338|gb|EFX39745.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 1218

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157  VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 688  VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 746

Query: 217  GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 747  GHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 806

Query: 256  WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 807  FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 866

Query: 314  IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 867  MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 923

Query: 374  DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
               +        +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 924  TLDVARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 983

Query: 424  VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N +       V +  + Q+  LL   +P +  +I+  +
Sbjct: 984  ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 1036



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 369 KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 428

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 429 VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 488

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 489 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 528


>gi|160947447|ref|ZP_02094614.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270]
 gi|158446581|gb|EDP23576.1| hypothetical protein PEPMIC_01381 [Parvimonas micra ATCC 33270]
          Length = 875

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 83/357 (23%), Positives = 142/357 (39%), Gaps = 35/357 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ +  + +F R+          Y      I+P  R  +V       +KD  
Sbjct: 344 HCERCKTIIEPIISKQWFVRMEELAKPAKQAYLDGKLNIIPE-RFGKVYINWLDNIKDWC 402

Query: 209 LSRKTFDWGIKI------------------------PDDPQYIMYVWIDALTNYLTTTGY 244
           +SR+   WG ++                            +  +  W  +     +T G+
Sbjct: 403 ISRQ-LWWGHRLPVYYCKETGEVVVSKKEPKEEGKTFIRDEDTLDTWFSSALWPFSTLGW 461

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            D  +  K  F+P +  V G DIL F    + + +      +P     F+       G K
Sbjct: 462 PDKTEDLK-YFFPTNTLVTGYDILFFWVIRMVFSSLYNLNEVPFRNVYFTGLIRDELGRK 520

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN IDPIE+I++ G DALR+ LV     G D  + +  ++   N + AN + N  
Sbjct: 521 MSKSLGNGIDPIEIIDKYGADALRFTLVGGNTPGNDMRFYEKRVES--NRNFANKLWN-A 577

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR V M L D +            D+ IL+  +R ++E+ EN+       A +++   + 
Sbjct: 578 SRFVLMNLNDEEIYDIDLNKIEIEDKWILTRLNRTIEELTENLSKFEFGLASSKIYDFIW 637

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +  K   L   N  +   V  V V V+  +  LL  F+P +  +I+  +
Sbjct: 638 NEFCDWYIEFSKT-RLYGDNLGKKIVVKSVLVYVLNNILKLLHPFMPFITEEIYSFM 693



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 23/173 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I           H+GHA    I D+L R+ R+ G + L+  GTD          
Sbjct: 34  DKVPYTIVMPPPNVTGNLHLGHALNNTIQDILIRWKRMSGYEALWVPGTDHASISTEAKV 93

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMAD----VLDISYDDFIRTTEKRH 102
                                    + ++   N ++         D S D F  T ++  
Sbjct: 94  VEKIKKDGNSKEKLGRDGFLEEAWDWTEKYGGNIKNQLKTLGVSCDWSRDAF--TLDENL 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
                 ++ K+ + G IY+G     +        +D EV +   DG +Y+ ++
Sbjct: 152 SKAVEEVFIKMYNDGLIYRGDRIVNWCCNCGTAISDAEVEHNDEDGNFYHIKY 204


>gi|270290996|ref|ZP_06197219.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280392|gb|EFA26227.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 887

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/359 (21%), Positives = 127/359 (35%), Gaps = 37/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       L   ++  +     ER             D  +SR+   W
Sbjct: 361 VESRLSTQWFVKMDKLAKMALVNQDTDDKVNFIPERFEHTFKQWMENAHDWVISRQ-LWW 419

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     TT G+ D      
Sbjct: 420 GHQIPAWYHKETGEVYVGEEAPKDVENWEQDPD-VLDTWFSSALWPFTTMGWPDENAADF 478

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 479 KRYFPTSTLVTGYDIIFFWVARMIFQSLKFTGKRPFKDVLLHGLIRDEQGRKMSKSLGNG 538

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +    +    N    N I N  SR V M L
Sbjct: 539 IDPMDVIDKYGADALRWFLSNGSTAGQDLRFSYTKMDAAWN--FINKIWN-ASRYVIMNL 595

Query: 371 KDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
              D    P       +D  ILS  +  ++++           A   + + + +   D Y
Sbjct: 596 DQVDKPQLPALNELNLADRWILSRLNHTVEQVTHFFDVYDFGEAGRALYTFIWDDFCDWY 655

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   +         V   V+ Q   LL   +P    KI+  L +  E    
Sbjct: 656 IEMSK-EILNGDDQTAQVNTQNVLAYVLDQTLRLLHPVMPFATEKIW--LSMPHEGESL 711



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D+L R  R+ G D ++  G D  G      
Sbjct: 36  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDTVWVPGMDHAGIATQAK 95

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +         + +S D      T ++   
Sbjct: 96  VEAKLREQGVSRYDLGRDKFIDKVWEWKDEYADTIHQQWAKMGLSLDYGRERFTLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 156 KAVRKVFVTLYNEGLIYRGEYIINWDPQARTALSDIEVEHQDD 198


>gi|224369188|ref|YP_002603352.1| ValS [Desulfobacterium autotrophicum HRM2]
 gi|223691905|gb|ACN15188.1| ValS [Desulfobacterium autotrophicum HRM2]
          Length = 886

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/373 (20%), Positives = 147/373 (39%), Gaps = 41/373 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+    + +F +      +      +    I+P    ++        ++D  +
Sbjct: 347 CYRCRTVVEPSLSKQWFVKAGPLAKEAADAVRNGQTRIVPENW-SKTYFDWLDNIRDWCI 405

Query: 210 SRKTFDWGIKIP--------------DDPQ--------------YIMYVWIDALTNYLTT 241
           SR+   WG +IP               DP                ++  W  +     +T
Sbjct: 406 SRQ-IWWGHRIPVWKCAACNGVIVEEQDPDCCTFCGSKDIIQETDVLDTWFSSALWPFST 464

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +N D  K  F+P +  V G DIL F    +          +P  K V+ H  +  +
Sbjct: 465 MGWPENTDLLKT-FYPTNALVTGFDILFFWVARMMMMGIHFMGEVPF-KDVYIHALVRDE 522

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GNVIDP++VI+  G DA R+ L    A G+D    ++ ++        N +
Sbjct: 523 HGKKMSKSKGNVIDPLKVIDTYGADAFRFTLAAFAAQGRDVKMSEERVEG--YRHFVNKL 580

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR   M + +    IP     +  +  I+   +   + ++E ++    + A + + 
Sbjct: 581 WN-ASRFALMHVDEQSKTIPLEN-LSPMESWIMERSTATARAVKEGIEEYRFNEAASAIY 638

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V     D + +A+KP   +K   DR +T   V   V++   ++L  F+P +  +I+ +
Sbjct: 639 QFVWHEFCDWFLEAEKPALYEKEGLDRRNTARAVLARVLQDTVVMLHPFMPFVTEEIWHM 698

Query: 477 LFVADENRCFQSL 489
           L   + +      
Sbjct: 699 LPTVENSIMAAHF 711



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA  + + D++ RF RL G +VL+  GTD  G      
Sbjct: 35  SEKRPYSIVIPPPNVTGVLHMGHALNITVQDIMCRFRRLMGDNVLWMPGTDHAGIATQNV 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++     +    +  S  +D    T ++   
Sbjct: 95  VERNLAQKGITRDQLGRETFIEEVWKWRNESGGAIINQLKRIGASCDWDRERFTMDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  R ++ ++  +G IY+G Y   +  R +    D EV       +      P +   E
Sbjct: 155 EAVRKVFVRLYKEGLIYEGNYITNWCPRCKTALADLEVEYEEQDSFLYYIKYPFEDGNE 213


>gi|330469644|ref|YP_004407387.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812615|gb|AEB46787.1| valyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 872

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 125/362 (34%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F   S                I P +   +        + D  
Sbjct: 350 HCSRCRTTVEPRLSLQWFVNTSPLAKAAGDAVRDGRVAIEPAD-LAKRYFAWVDNMHDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 409 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEQPPTGEGWHQDEDVLDTWFSSGLWPFSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 468 PEQTP-ELAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGKQPFDVIALHGMVRDEHGK 526

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ I+  G DA R+ L R    G D    +D  +   N    N + N 
Sbjct: 527 KMSKSFGNVVDPLDWIDRYGADATRFTLARGANPGGDVPVSEDWCQGSRN--FCNKLWN- 583

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   +      G +P     +  D  ILS  ++V  E+ E  +     +    +    
Sbjct: 584 ATRFALLNGAHTAGALPGAAELSTVDRWILSRLAQVTAEVDEQFEAYEFAKVCDLLYHFA 643

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  KP  L       A T   V   V+ QL  LL   +P +  +++  L  
Sbjct: 644 WDDVCDWYVELSKP-VLAAGG-AAADTSRRVLGHVLDQLLRLLHPVIPFVTEELWTALTG 701

Query: 480 AD 481
            +
Sbjct: 702 GE 703



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPFTIVIPPPNVTGSLHMGHALDHTVQDALVRRKRMQGFEALWLPGMDHAGIATQNV 103

Query: 62  AQ---------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            +            +  + FV++  +             R + D +D   + F  T ++ 
Sbjct: 104 VERQLAAQGLSRHDLGREKFVERVWQWKAESGGAILGQMRRLGDSVDWDRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                  ++KK+ D G IY+      +  R     +D EV    D
Sbjct: 162 LSRAVLTMFKKLYDDGLIYRANRIINWCPRCLTALSDIEVEHSDD 206


>gi|307126771|ref|YP_003878802.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483833|gb|ADM90702.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 883

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 133/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|327490058|gb|EGF21846.1| valine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 883

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQATDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNADGEIYVSEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                           A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDAARENVAQVTAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNDDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|241889659|ref|ZP_04776957.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863281|gb|EER67665.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 880

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 137/356 (38%), Gaps = 34/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F  +    DK+L   +           R    ++     ++D  +SR+   
Sbjct: 353 VEPYLSKQWFVDMKPLADKVLENQKDADRKVNFYPPRFENTLNTWMENIQDWCISRQ-LW 411

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D      
Sbjct: 412 WGHRIPAWYHKETGEVYVDVNPPKDIENYVQDEDVLDTWYSSALFPFSTLGWPDLESEDF 471

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 472 KRYYPNSCLVTGYDIIFFWVARMVFQGLEFTGTRPFEDCLIHGLVRDEQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVIE+ G D+LRYFL      G+D  Y  + ++   N    N I N  SR V M L
Sbjct: 532 VDPMEVIEQYGADSLRYFLATNSTPGQDLRYSTEKIEASWN--YINKIWN-ASRFVIMNL 588

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           + ++       G  T +D+ IL+  ++ +++     +      A   + + V E     Y
Sbjct: 589 EGFEYSDIDLTGEKTLADKYILTKLAKTIEDFERLFEKYEFGEASRILYNFVWEEFCSWY 648

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   +     T   + V V+     +L  F+P +  +I+  +    ++
Sbjct: 649 IEIAK-ISLNGEDEAAKKTTKSILVYVLDASLKMLHPFMPFVTEEIWQHIPHTGDS 703



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         + HIGHA++  + D+L R+ RL G DVL+  G D  G      
Sbjct: 33  SKKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMDHAGISTQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +  D      T ++  +
Sbjct: 93  VEAKMREEGLSRYDLGREKFLERAWEWKEEYAGYIRAQWAKLGLGLDYSRERFTLDEGLN 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                ++    + G IY+G     W  ++  A  N + ++K  +G +Y+ ++
Sbjct: 153 KAVTKIFVDHYNNGTIYRGEKIINWDPVQRTALSNIEVIHKDVEGAFYHLKY 204


>gi|325690919|gb|EGD32919.1| valine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 882

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T      +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVANKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKARPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|324993629|gb|EGC25548.1| valine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995059|gb|EGC26972.1| valine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 882

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 131/355 (36%), Gaps = 40/355 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKIP----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G +IP                       DP  ++  W  +     +T G+ D       +
Sbjct: 412 GHQIPAWYNAGGEIYVGEEAPKGDEWIQDPD-VLDTWFSSALWPFSTMGWPDIDSADFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN ID
Sbjct: 471 YYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDAARENVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|322412300|gb|EFY03208.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 883

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 131/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTIGWPDTDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 ----DGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       A +E+    D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 589 ILEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 649 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGQGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|306826992|ref|ZP_07460290.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430738|gb|EFM33749.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 882

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDNRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTIGWPDTDVEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKIVRLLHPIMPFVTEEIYAQ 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|25010562|ref|NP_734957.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457458|sp|Q8E6S0|SYV_STRA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23094915|emb|CAD46136.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 884

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ E+        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTESFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVVTRSVLLYTLDQILRLLHPIMPFVTEEIFGQ 700



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  TEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|77414609|ref|ZP_00790750.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159348|gb|EAO70518.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 883

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/353 (19%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ E+        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTESFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVVTRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  TEAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  + +KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|289523084|ref|ZP_06439938.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503627|gb|EFD24791.1| valine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 895

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 139/383 (36%), Gaps = 45/383 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    +  ++    E +F R      + +   +      +P    N    +++  ++D  
Sbjct: 348 HCYRCNTILEPYLSEQWFVRTEPLAKRAIEVVKEGKIRWIPERWVNTYYQWME-NIRDWC 406

Query: 209 LSRKTFDWGIKI----PDDPQY------------------------IMYVWIDALTNYLT 240
           +SR+   WG +I      D  +                        ++  W  +     +
Sbjct: 407 ISRQ-LWWGHRIPAWTCLDCNHITVSEIDPVECENCGSRAIVQDEDVLDTWFSSALWPFS 465

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +        F+P  L V G DI+ F    +         ++P             
Sbjct: 466 TMGWPEQTP-ELTYFYPTSLLVTGFDIIFFWVARMIMMGLKFMDDVPFKDVYIHALVRDE 524

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG+K+SKS GNVIDP+++I + G D+LR+ L      G+D F     ++        N I
Sbjct: 525 KGQKMSKSKGNVIDPVDIINQYGADSLRFTLSSLTVQGRDIFLSTQKIES--CRHFMNKI 582

Query: 359 GNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            N  +R   M L D+D         +    D  I+   ++V +E+ + ++      A   
Sbjct: 583 WN-AARFALMNLGDFDESRTMEFDDSLRLHDRWIVMRVNQVTKEVTDLIEGYFFGEASKM 641

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   V     D Y +  KP         R      V   V +++ +LL  F+P +  +++
Sbjct: 642 LYDFVWGELCDWYIEMSKPALRGDEGSKRKIASQKVLYYVFKKVLLLLHPFIPFITEELW 701

Query: 475 DILFVADENRCFQSLDQRLKPGF 497
                +       S+++   PG 
Sbjct: 702 HSFGFSQ-----MSIEEEPWPGT 719



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA    + D++ R+ R+ G +V++  GTD  G      
Sbjct: 37  ETKEPFSIVIPPPNVTGSLHMGHALNNTLQDIVCRYKRMKGFNVMWIPGTDHAGIATQNV 96

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +  +           L  S  +D    T ++   
Sbjct: 97  VERELAKKGIDRKDMTREAFLEKVWEWKSEYGGRIISQLKRLGASCDWDRERFTMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++  +G IYKG Y   +  R     +D EV    +
Sbjct: 157 KAVRAVFVRLYKEGLIYKGKYIINWCPRCHTALSDLEVEHTTE 199


>gi|309389514|gb|ADO77394.1| valyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 884

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/425 (20%), Positives = 155/425 (36%), Gaps = 42/425 (9%)

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            D  I T             +      D Y+        L  E      E ++   G+ Y
Sbjct: 291 NDLEIVTVIDEDAKMTEAAGEA-YAGLDRYQARKKVIKDLEKEGLLVKIEDHQHNVGECY 349

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                 ++ +  + +F ++    +  ++  E      +P  R ++V     + ++D  +S
Sbjct: 350 R-CDTVIEPLISKQWFVKMQPLAEPAIAAVEESDINFVPD-RFSKVYMNWMNNIRDWCIS 407

Query: 211 RKTFDWGIKI----PDDPQYIM------------------------YVWIDALTNYLTTT 242
           R+   WG +I     +D   +M                          W  +     +T 
Sbjct: 408 RQ-LWWGHRIPVYYCNDCDEVMVSKTEPETCSNCGSSNLRQDEDVLDTWFSSALWPFSTL 466

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+ +        F+P D+ V G+DI+ F    + +         P             +G
Sbjct: 467 GWPEETA-DLESFYPTDVLVTGRDIIFFWVARMIFMGLKFQDQKPFSDIYIHGLIRDAQG 525

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN IDP+++I++ G DALR+ L+     G D  + ++ L+   N   AN I N
Sbjct: 526 RKMSKSLGNGIDPLDIIDQFGTDALRFTLITGNTPGNDMRFREERLEASRN--FANKIWN 583

Query: 361 LVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             SR V M L+D++           T +D  + S  + V  EI + +         + + 
Sbjct: 584 -ASRFVLMNLEDFELASVQKEDLKPTLADNWMQSRLNTVAGEIDKTLARYDFGEMASSLY 642

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     D Y +  K    +  +P    T  Y  +  +  L  LL   +P +  +I+  
Sbjct: 643 DFIWNEFCDWYIELLKARLYQDQDPKAKLTAQYYALNTLESLLRLLHPVMPFITEEIWQK 702

Query: 477 LFVAD 481
           L   +
Sbjct: 703 LPGTE 707



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I         Q H+GHA +  + D+L R+ R+ G   L+  GTD         
Sbjct: 35  TEKGTFSIVMPPPNITGQLHMGHALDNTLQDILTRWKRMQGYRSLWLPGTDHASIATEVK 94

Query: 62  AQNAGV--------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
             N                         + +  + +   + M    D S + F  T ++ 
Sbjct: 95  VVNKLREEGIAKEDITREEFLEKAWEWKEEYGTRITNQLKKMGSSCDWSRERF--TLDQG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             D    ++ K+ ++G IY+G Y   +        +D EV  
Sbjct: 153 CSDAVEEVFIKLYEEGLIYQGDYIVNWCPSCHTTLSDIEVEH 194


>gi|16332082|ref|NP_442810.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501067|sp|Q55522|SYV_SYNY3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1001391|dbj|BAA10881.1| valyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 910

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/384 (21%), Positives = 144/384 (37%), Gaps = 61/384 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++ +     L+  +         ER  +V       LKD  +SR+   
Sbjct: 352 PVEPLLSTQWFVKIESLAQNALACLDEDNSPNFVPERWGKVYRDWLVKLKDWCISRQ-LW 410

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +++  DP  ++  W  
Sbjct: 411 WGHQIPAWYVISETNGAITDHTPFIVAYDEAEALAKAKAEYGPTVQLQQDPD-VLDTWFS 469

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  D   AK++P    V G DI+ F    +   A   +  +P      
Sbjct: 470 SGLWPFSTMGWPEQTD-DLAKYYPTSTLVTGFDIIFFWVARMTMMAGHFTGQIPFKDVYI 528

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
                   G+K+SKS  N IDP+ +I + G DALRY L+RE+A  G+D     D  K + 
Sbjct: 529 HGLVRDENGKKMSKSANNGIDPLLLINKYGTDALRYTLIREVAGAGQDISLQYDRQKDES 588

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIRE 403
            + + +    N +  +   ++ + DG  P             +D  ILS  ++V+Q+ RE
Sbjct: 589 ESVEASRNFANKLWNAARFVMMNLDGQTPQQLGLAPGEDLELADRWILSRLNQVIQQTRE 648

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPD----RASTVLYVTVEVIRQ 457
            +++  +  A   +   +     D Y +  KP    K   D    R      V    +  
Sbjct: 649 QIEDYGLGEAAKGLYEFIWGDFCDWYIELAKPRLWNKEGGDVGTQRQLVARQVLAHTLDS 708

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           +  LL  F+P +  +++  L  A+
Sbjct: 709 IIKLLHPFMPHITEELWQTLHQAE 732



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+E  + D L R+HR+ G + L+  GTD     +    + 
Sbjct: 37  EPYCVVIPPPNVTGSLHMGHAFESSLIDTLVRYHRMRGDNTLWLPGTDHASIAVQTILER 96

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++     +    L +S D      T ++      
Sbjct: 97  QLKAEGKTRDDLGREKFLERAWQWKAESGSTIVNQLRRLGVSVDWTRERFTMDEGLSQAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + K+ ++G IY+G Y   +    ++  +D EV       +      P+
Sbjct: 157 KTAFIKLYEEGLIYRGNYLVNWCPASQSAVSDLEVENQEVDGHLWYFRYPL 207


>gi|254431649|ref|ZP_05045352.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626102|gb|EDY38661.1| valyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 929

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 143/420 (34%), Gaps = 68/420 (16%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                    +    PV+ +    +F +      +     +      +P  R  +V     
Sbjct: 357 PHRHSVPCSDRGKVPVEPLLSTQWFVKAEPLAARCREALDQGQPRFVPE-RWAKVYRDWL 415

Query: 202 SGLKDLSLSRKTFDWGIKIP---------------------------------------- 221
           + ++D  +SR+   WG +IP                                        
Sbjct: 416 TDIRDWCISRQ-LWWGHRIPAWFVVSETGGVITDATPYVVARDAAEAEAKAEAQYGAASR 474

Query: 222 ---------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
                     DP  ++  W  +     +T G+ D+     A ++P  + V G DI+ F  
Sbjct: 475 AAGRQLQLEQDPD-VLDTWFSSGLWPFSTLGWPDDTSVDLAAWYPTSVLVTGFDIIFFWV 533

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +   A   +  +P                K+SKS GN IDP+ +IE  G DALR+ LV
Sbjct: 534 ARMTMMAGAFTGRMPFRDVYIHGLVRDENNRKMSKSAGNGIDPLPLIERYGADALRFALV 593

Query: 331 REIA-CGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTP------GA 382
           RE+A  G+D   D D         + A    N +  +    L +  G  P+         
Sbjct: 594 REVAGAGQDIRLDYDRNDGSSGTVETARNFANKLWNATRFALMNLGGETPSSLGRPLTAE 653

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
               D  ILS  +R  ++  E   +  +  A   +         D+Y +  KP  L   +
Sbjct: 654 LESEDRWILSRLARTAEQAAELYGSYRLGEAAKLLYEFAWNDLCDQYIEWAKP-RLAGED 712

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFM 498
           P   +    V    +  L ++L   +P L  +++  +  A+  E    Q+  + L  G++
Sbjct: 713 PAARTAARRVLAHSLEALLVMLHPLMPHLTEELWHAVTRAEATEFLALQAWPE-LDAGWI 771



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           E   +           H+GH +E  + D + RF RL G +VL   GTD     +      
Sbjct: 51  EPFSVVIPPPNVTGSLHMGHGFETALIDTIVRFQRLRGRNVLCLPGTDHASIAVQTILEK 110

Query: 61  ---------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                          A      + K           R +   +D   + F  T +     
Sbjct: 111 QIQAEGGSKDDLGRDAFLERAWSWKAESGGTIVGQLRRLGYSVDWGRERF--TLDPGLSA 168

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
                + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 169 AVAEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVETKEVDGHLWHFRY 219


>gi|327183314|gb|AEA31761.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 879

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/448 (18%), Positives = 160/448 (35%), Gaps = 48/448 (10%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     +      R     +++  DD   T  +                 D +       
Sbjct: 275 TPAHDPNDFQVGNRHNLKRINVMNDD--GTMNEECGK---------YAGMDRFDCREQLV 323

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
             L++E Y    E    + G    +    V+    + +F ++    DK+L   ++  +  
Sbjct: 324 KDLKEEGYLIKIEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLADKVLENQKTAGKVN 382

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------DD 223
              ER    +      + D  +SR+   WG +IP                         D
Sbjct: 383 FVPERFEGTLDHWMEDVHDWCISRQ-LWWGHRIPAWYNKKTGETYVGVDAPKDAENWEQD 441

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+ D       +++P +  V G DI+ F    + + +   +
Sbjct: 442 PD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNALVTGYDIIFFWVSRMMFQSLHFT 500

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P    V        +G K+SKSLGN +DP++V+++ G DALR+FL+   A G+D  Y
Sbjct: 501 GKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRY 560

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQE 400
           D   L    N    N I N     +  + +D     +P    F  SD  I    +  + E
Sbjct: 561 DPKKLSAAWN--FINKIWNASRFVIMNLPEDAKPAHMPEVSKFDLSDRWIFDRLNHTVSE 618

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +           A  ++ + +     D Y +  K   L   + +  +      + ++ Q+
Sbjct: 619 VTRLFDEYKFGEAGRELYNFIWNDFCDWYIEISKV-ALNGDDEELKARKQENLIWILDQI 677

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF 486
             L+   +P +  K++  L +  E +  
Sbjct: 678 LRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|161507301|ref|YP_001577255.1| valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348290|gb|ABX26964.1| Valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 879

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 139/360 (38%), Gaps = 38/360 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    DK+L   ++  +     ER    +      + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNALVTGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNL 586

Query: 371 --KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDR 426
                   +P    F  SD  I    +  + E+           A  +  + +     D 
Sbjct: 587 PSDAKPAHMPDVSKFDLSDRWIFDRLNHTVSEVTRLFDEYQFGEAGREAYNFIWNDFCDW 646

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 647 YIEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++  +G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYKEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|322376122|ref|ZP_08050631.1| valine--tRNA ligase [Streptococcus sp. C300]
 gi|321278890|gb|EFX55934.1| valine--tRNA ligase [Streptococcus sp. C300]
          Length = 883

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDMDSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|297566936|ref|YP_003685908.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851385|gb|ADH64400.1| valyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 872

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/387 (21%), Positives = 146/387 (37%), Gaps = 46/387 (11%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M    +F R+     K+L   E      +P  R  +V       ++D ++ R+   
Sbjct: 357 PIEPMLLTQWFVRMKPVAQKVLEGLERGEMRFVPE-RWEKVNRDWLENIRDWAIGRQ-LW 414

Query: 216 WG--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG  I    D +  +YV                              W  +     +T G
Sbjct: 415 WGHQIPAWYDEEGNIYVPDPENPDLDCDQDPRYAHLRLRRDEDVFDTWFSSALWPFSTLG 474

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D+ +  K KF+P D+ V G DI+ F    +    +  +   P    V    ++  KG+
Sbjct: 475 WPDDTEDLK-KFYPTDVLVTGYDIIFFWVARMQMSGYQFTGQAPFHTIVLHGLYLDEKGQ 533

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP+E+I+  G DA R+        G+D  +D    ++    + AN + N 
Sbjct: 534 KMSKSKGNGIDPLELIDRYGADACRFAWDYLATGGQDIRHDPRRYEQ--GRNFANKLWNA 591

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
               +                 T +D  + S  SR + EI E  +   + RA   +  LV
Sbjct: 592 ARFVLMNKDAIRQTQDAKREDLTLADRWMTSRLSRGIAEITEAYEAYDLGRAARLIYDLV 651

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D Y +A KP  L++ N     T+ +        L  LL   +P + ++++  L  
Sbjct: 652 WSEFCDWYLEAAKP-ALREGNTATLHTLEHTLA----ALLKLLHPIMPFITSELYQALTD 706

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFDPI 506
             +    Q      +      K F+ +
Sbjct: 707 DPQQLALQEWPTASERDLAAEKAFETL 733



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 51/175 (29%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I           H+GHA +  I D L RF R+ G + L+  GTD  G      
Sbjct: 37  KGKGPFTIVIPPPNVTGNLHLGHALDNTIIDTLIRFKRMQGYEALYLPGTDHAGITTQVL 96

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        F ++N          +  S D      T +    
Sbjct: 97  VERELAKEGKSRHDLGREKFLERVWEFKEKNGGTILYQLRRIGASCDWSRERFTMDPGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R  + +   +G  Y+G     +    +   +D EV +            P +
Sbjct: 157 RAVRRAFVEYYHQGLAYRGARIVNWDPVAQTVLSDLEVDREERQSQLWVLEYPFE 211


>gi|323466819|gb|ADX70506.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 879

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 139/360 (38%), Gaps = 38/360 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    DK+L   ++  +     ER    +      + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNALVTGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNL 586

Query: 371 --KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDR 426
                   +P    F  SD  I    +  + E+           A  +  + +     D 
Sbjct: 587 PSDAKPAHMPDVSKFDLSDRWIFDRLNHTVSEVTRLFDEYQFGEAGREAYNFIWNDFCDW 646

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 647 YIEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I         + H+GHA++  I D L RF R+ G D L+  G D  G       +  
Sbjct: 37  PYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAKVEAK 96

Query: 66  GVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + D+ +   +     + +S D      T +K      +
Sbjct: 97  LRKQGKDRHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++ ++  +G IY+G Y   +    +   +D EV    D
Sbjct: 157 KVFVQLYKEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|317495673|ref|ZP_07954038.1| valyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914126|gb|EFV35607.1| valyl-tRNA synthetase [Gemella moribillum M424]
          Length = 880

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 138/356 (38%), Gaps = 34/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F  +    DK+L   +    +      R    ++     ++D  +SR+   
Sbjct: 353 VEPYLSKQWFVDMKPLADKVLENQKDEDGKVNFYPPRFEHTLNTWMENIQDWCISRQ-LW 411

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D      
Sbjct: 412 WGHRIPAWYHKETGEVYVDVNPPKDIENYVQDEDVLDTWYSSALFPFSTLGWPDLESEDF 471

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 472 KRYYPNSCLVTGYDIIFFWVARMVFQGLEFTGTRPFEDCLIHGLVRDEQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVIE+ G D+LRYFL      G+D  Y  + ++   N    N I N  SR V M L
Sbjct: 532 VDPMEVIEQYGADSLRYFLATNSTPGQDLRYSTEKIEASWN--YINKIWN-ASRFVIMNL 588

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           + ++       G  T +D+ IL+  ++ +++     +      A   + + V E     Y
Sbjct: 589 EGFEYSDIDLSGEKTLADKYILTKLAKTIEDFERLFEKYEFGEASRILYNFVWEEFCSWY 648

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   +     T   + V V+     +L  F+P +  +I+  +    ++
Sbjct: 649 IEIAK-ISLNGEDEAAKKTTKSILVYVLDASLKMLHPFMPFVTEEIWQHIPHTGDS 703



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         + HIGHA++  + D+L R+ RL G DVL+  G D  G      
Sbjct: 33  SNKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMDHAGISTQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +  D      T ++  +
Sbjct: 93  VEAKMREEGISRYDLGREKFLERAWEWKEEYAGYIRAQWAKLGLGLDYSRERFTLDEGLN 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                ++    + G IY+G     W  ++  A  N + ++K  +G +Y+ ++
Sbjct: 153 KAVTKIFVDHYNNGTIYRGEKIINWDPVQRTALSNIEVIHKDVEGAFYHLKY 204


>gi|315221983|ref|ZP_07863894.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188949|gb|EFU22653.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 890

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 133/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F R+       ++  ++  E      R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVRMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDIEAEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                +          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 588 TLDQASTNVEKVVAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF+ +
Sbjct: 648 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 700



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEARLAEDGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 153 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 192


>gi|260102647|ref|ZP_05752884.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083552|gb|EEW67672.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 879

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 139/360 (38%), Gaps = 38/360 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    DK+L   ++  +     ER    +      + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTNSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNALVTGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N  SR V M L
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWN-ASRFVIMNL 586

Query: 371 --KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDR 426
                   +P    F  SD  I    +  + E+           A  +  + +     D 
Sbjct: 587 PSDAKPAHMPDVSKFDLSDRWIFDRLNHTVSEVTRLFDEYQFGEAGREAYNFIWNDFCDW 646

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 647 YIEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I         + H+GHA++  I D L RF R+ G D L+  G D  G       +  
Sbjct: 37  PYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYIPGMDHAGIATQAKVEAK 96

Query: 66  GVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + D+ +   +     + +S D      T +K      +
Sbjct: 97  LRKQGKDHHQMGREAFVKQVWDWKDEYASIIKGQWAKMGLSLDYSRERFTLDKGLSKAVK 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++ ++  +G IY+G Y   +    +   +D EV    D
Sbjct: 157 KVFVQLYKEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|324991274|gb|EGC23207.1| valine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 883

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDAARENVAQVAASQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNDDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|315038034|ref|YP_004031602.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276167|gb|ADQ58807.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 879

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/448 (18%), Positives = 160/448 (35%), Gaps = 48/448 (10%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     +      R     +++  DD   T  +                 D +       
Sbjct: 275 TPAHDPNDFQVGNRHNLKRINVMNDD--GTMNEECGK---------YAGMDRFDCREQLV 323

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
             L++E Y    E    + G    +    V+    + +F ++    DK+L   ++  +  
Sbjct: 324 KDLKEEGYLIKIEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLADKVLENQKTAGKVN 382

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------DD 223
              ER    +      + D  +SR+   WG +IP                         D
Sbjct: 383 FVPERFEGTLDHWMEDVHDWCISRQ-LWWGHRIPAWYNKKTGETYVGVDAPKDAENWEQD 441

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+ D       +++P +  V G DI+ F    + + +   +
Sbjct: 442 PD-VLDTWFSSALWPFSTLGWPDTDSEDFKRYFPTNALVTGYDIIFFWVSRMMFQSLHFT 500

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P    V        +G K+SKSLGN +DP++V+++ G DALR+FL+   A G+D  Y
Sbjct: 501 GKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRY 560

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQE 400
           D   L    N    N I N     +  + +D     +P    F  SD  I    +  + E
Sbjct: 561 DPKKLSAAWN--FINKIWNASRFVIMNLPEDAKPAHMPEVSKFDLSDRWIFDRLNHTVSE 618

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +           A  ++ + +     D Y +  K   L   + +  +      + ++ Q+
Sbjct: 619 VTRLFDEYKFGEAGRELYNFIWNDFCDWYIEISKV-ALNGDDEELKARKQENLIWILDQI 677

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF 486
             L+   +P +  K++  L +  E +  
Sbjct: 678 LRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|290579895|ref|YP_003484287.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996794|dbj|BAH87395.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 882

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 133/355 (37%), Gaps = 38/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PIEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNADGDMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFQNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++V+++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVVDKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNKEG 587

Query: 373 YDGMIP--------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                            A   +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LSLDQASANVDLVVNSKAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + ++  LL   +P +A +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVAEEIFGQI 701



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKTPPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|323350983|ref|ZP_08086640.1| valine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122707|gb|EFX94416.1| valine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 882

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +        +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDVARENVAQVAAGQAGNVTDRWILHNLNETISKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNDDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|160878630|ref|YP_001557598.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427296|gb|ABX40859.1| valyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 892

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 147/375 (39%), Gaps = 22/375 (5%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G   +   +    ++ + +   DE+ K A     N     V     E  +F  +   
Sbjct: 341 HNVGTHDRCNTTIEPLIKQQWFVKMDELIKPAVEAVKNKDIELV-PERMEKVYFNWTDNI 399

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                  +      +P    ++    V S       +  T + G          +  W  
Sbjct: 400 RDWCISRQLWWGHRIPAYYCDKCGKVVVSK-----TTPTTCECGHDHFTQDPDTLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +     F+P D+ V G DI+ F    + +  +      P    +F
Sbjct: 455 SALWPFSTLGWPEKTE-DLEYFYPTDVLVTGYDIIFFWVIRMIFSGYEQMNEKPFKTVLF 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+E+IE+ G DALR+ L+   A G D  +  + ++   N
Sbjct: 514 HGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFMLITGNATGNDMRFYMERVEAARN 573

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-------GAFTESDESILSVCSRVLQEIREN 404
              AN + N  SR + M ++  +                T++D+ I+S  + + +++ E+
Sbjct: 574 --FANKVWN-ASRFIMMNMQQMEEAGMDAKVDSVDMSTLTDADKWIISKVNTLTKDVTEH 630

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++   +  A  +V   + E   D Y +  KP  L   +    +  +Y    V+     LL
Sbjct: 631 LEKFDLGIAAQKVYDFIWEEFCDWYIEMVKP-RLYGDDQATKTAAIYTLRTVLDSALKLL 689

Query: 463 QAFVPKLANKIFDIL 477
             ++P +  +IF  L
Sbjct: 690 HPYMPFITEEIFCTL 704



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD         
Sbjct: 34  KTKKPFTIVIPPPNITGQLHMGHALDNTMQDILIRFKRMQGFNALWQPGTDHASIATEVK 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
              A                      + D+           L  S  +D    T ++   
Sbjct: 94  IIEALKKEGIDKDQLGREGFLKRAWEWKDEYGGRIIGQLKKLGSSCDWDRERFTMDEGCS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                ++ K+ +KG IYKG     +        +D EV       ++     PV   +E
Sbjct: 154 KAVEEVFVKMYEKGMIYKGSRIINWCPVCHTSISDAEVEYEDQAGHFWHIKYPVVGTDE 212


>gi|327474501|gb|EGF19906.1| valine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 883

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +        +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDVARENVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDRFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|322377722|ref|ZP_08052212.1| valine--tRNA ligase [Streptococcus sp. M334]
 gi|321281487|gb|EFX58497.1| valine--tRNA ligase [Streptococcus sp. M334]
          Length = 883

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|325956486|ref|YP_004291898.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333051|gb|ADZ06959.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 879

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 139/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    DK+L   ++  +     ER    +      + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLADKVLENQKTDGKVNFVPERFEGTLDHWMEDVHDWCISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGVDAPKDAENWEQDPD-VLDTWFSSALWPFSTLGWPDTDSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNALVTGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N     +  + 
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           ++     +P    F  SD  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 ENAKPAHMPEVSKFDLSDRWIFDRLNHTVSEVTRLFDEYKFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 648 IEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|329121233|ref|ZP_08249860.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327470167|gb|EGF15630.1| valine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 906

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/412 (20%), Positives = 155/412 (37%), Gaps = 45/412 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            +  D Y+        L ++      E  + A G   +     ++ +    +F ++    
Sbjct: 335 YNGMDRYEARKQIIKDLEEQGLLVKTETKEHAVGH-CSRCETVIEPLTTRQWFVKMKPLA 393

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--------------- 218
              +    S     +P    N  I +++  + D  +SR+   WG                
Sbjct: 394 KPAMDAVTSGKTKFVPERFTNIYIQWLE-NIHDWCISRQ-LWWGHRIPVWYCEECKETIA 451

Query: 219 --------------KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                         KI  DP  ++  W  +     +T G+ +  +  K +++P    V G
Sbjct: 452 SRTDITECTNCGSKKINQDPD-VLDTWFSSALWPFSTMGWPEKTETLK-QWYPTSTMVTG 509

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+ F    + + +      +P             +G K+SKSLGN IDP+EVIE+ G 
Sbjct: 510 YDIIFFWVARMMFMSMEFMHEIPFKYVFIHGLVRDSQGRKMSKSLGNGIDPLEVIEKYGA 569

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPG 381
           DALR+ LV     G D  +  + ++   N + AN + N  ++   M L +YD   IP   
Sbjct: 570 DALRFTLVTGNTPGNDMRFYYERVEG--NRNFANKLWN-ATKFTLMNLDNYDKNFIPEEK 626

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT 439
            +  +D+ IL   ++  + +  N+    +  A   + +       D Y +  K     + 
Sbjct: 627 DYALADKWILEKLAKTEEFVSRNLDKYELGEAADSIYNFAWNCFCDWYIETAKSRLYAEH 686

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             DR     YV V  + ++  LL  F+P +   ++  L    E +     + 
Sbjct: 687 CRDR-QVTQYVLVYTLTRMLALLHPFMPFITEHLWQHL--PHEGKTLARAEW 735



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I         Q H+GHA +  + D+L R+ R+ G +V++  G D  G      
Sbjct: 58  SSKEPYSIVLPPPNVTGQLHMGHALDGTLQDILIRYKRMQGYNVMWLPGKDHAGIATQVK 117

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + + +   +  R +    D + + F  T +  
Sbjct: 118 VEKQIAKEGLTKYDLGREKFLERVWQWKEKYGNTIGKQIRKLGSSCDWTRERF--TMDDV 175

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R ++  + +KG IY+G     +  R +   +D EV    +       + P+   +
Sbjct: 176 CAKAVREVFITLYEKGLIYRGFRITNWCPRCQTALSDIEVEHENEDGKLYYVNYPIVGSD 235

Query: 162 E 162
           E
Sbjct: 236 E 236


>gi|328953118|ref|YP_004370452.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453442|gb|AEB09271.1| Valyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 886

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 140/381 (36%), Gaps = 23/381 (6%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             + K +   G  Y+        L  + +     + + A           +  M E+ +F
Sbjct: 334 EKVEKYVHGVGHCYRCRAVVEPMLSKQWFVAVKPLAEAAVAAVTEGSIRIIPPMWEKTFF 393

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
             +   +D  +S        I                +            G       + 
Sbjct: 394 EWMDNIRDWCISRQIWWGHRI-----PAWNCPACGEIIVVRETPTHCPKCGGTELVQEED 448

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ +        F+P  + V   DIL F    W A ++   L  
Sbjct: 449 VLDTWFSSALWPFSTLGWPEQTR-ELTLFYPTSVLVTAFDILFF----WVARMMMMGLYF 503

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            K+V      +H      +G+K+SKS GNV+DP+EV+EE G DA R+ L    A G+D  
Sbjct: 504 MKEVPFREVYIHALVRDAEGQKMSKSKGNVVDPLEVMEEYGTDAFRFSLAAFAAMGRDVR 563

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVL 398
             ++ +      +  N I N  SR   M L DYD         A +  +  I+S   +V 
Sbjct: 564 LSEERIAG--YRNFVNKIWN-ASRFTLMNLADYDYAAAAHDTVALSLEERWIVSRLQQVC 620

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           Q + E + +    +A  Q+         D Y +  KP     T+P R      V  E++ 
Sbjct: 621 QAVTEALDSYNFDQAANQLYQFAWHEFCDWYLELIKPALYDNTDPVRRRHTQRVLQEILS 680

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  LL  F+P +  +I+  L
Sbjct: 681 ALLRLLHPFMPFVTEEIWHKL 701



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 51/162 (31%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R    I           H+GHA    + D+L R  R+ G + L+  GTD  G      
Sbjct: 34  SDRHPYSIVIPPPNITGSLHMGHALNNTLQDILCRCKRMQGYNTLWMPGTDHAGIATQNV 93

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          K          + +    D S + F  T +  
Sbjct: 94  VERMLAAEGKDRHTVGREAFIERVWQWKKESGGHIINQLKRLGCSCDWSRERF--TMDAG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++ + G IYKG Y   +  R +    D EV  
Sbjct: 152 LSAAVREVFVRLYEDGLIYKGDYIINWCPRCQTALADLEVEH 193


>gi|306830047|ref|ZP_07463233.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427760|gb|EFM30854.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 883

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|262282776|ref|ZP_06060544.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262067|gb|EEY80765.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 882

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 471 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T      +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 588 TLEQATANVEKVANKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 648 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 700



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 93  VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKQQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 153 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 192


>gi|225870967|ref|YP_002746914.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700371|emb|CAW94709.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 883

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/353 (19%), Positives = 130/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGDMYVGEEAPAGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFQRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRKPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                +      +        D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLEQASANVEQVASGAAGNVTDCWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYAIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKR 101
            +                        + D+ +   ++    L +S     D F  T ++ 
Sbjct: 94  VEERLREQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSLDYARDRF--TLDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 152 LSKAVRKVFVELYKKGWIYRGEFIINWDSAARTALSDIEVIH 193


>gi|327470389|gb|EGF15845.1| valine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 883

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNGNGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDAAREDVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|329767449|ref|ZP_08258974.1| valyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836138|gb|EGF85829.1| valyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 880

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 74/350 (21%), Positives = 135/350 (38%), Gaps = 34/350 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F  +    DK+L   +           R    ++     ++D  +SR+   
Sbjct: 353 VEPYLSKQWFVDMKPLADKVLENQKDADRKVNFYPPRFENTLNTWMENIQDWCISRQ-LW 411

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D      
Sbjct: 412 WGHRIPAWYHKETGEVYVDVNPPKDIENYVQDEDVLDTWYSSALFPFSTLGWPDLESEDF 471

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 472 KRYYPNSCLVTGYDIIFFWVARMVFQGLEFTGTRPFEDCLIHGLVRDEQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVIE+ G D+LRYFL      G+D  Y  + ++   N    N I N  SR V M L
Sbjct: 532 VDPMEVIEQYGADSLRYFLATNSTPGQDLRYSTEKIEASWN--YINKIWN-ASRFVIMNL 588

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           + ++       G  T +D+ IL+  ++ +++     +      A   + + V E     Y
Sbjct: 589 EGFEYSDIDLTGEKTLADKYILTKLAKTIEDFERLFEKYEFGEASRILYNFVWEEFCSWY 648

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L   +     T   + V V+     +L  F+P +  +I+  +
Sbjct: 649 IEIAK-ISLNGEDEAAKKTTKSILVYVLDASLKMLHPFMPFVTEEIWQHI 697



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         + HIGHA++  + D+L R+ RL G DVL+  G D  G      
Sbjct: 33  SKKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMDHAGISTQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +  D      T ++  +
Sbjct: 93  VEAKMREEGLSRYDLGREKFLERAWEWKEEYAGYIRAQWAKLGLGLDYSRERFTLDEGLN 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                ++    + G IY+G     W  ++  A  N + ++K  +G +Y+ ++
Sbjct: 153 KAVTKIFVDHYNNGTIYRGEKIINWDPVQRTALSNIEVIHKDVEGAFYHLKY 204


>gi|322385938|ref|ZP_08059579.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270053|gb|EFX52972.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 883

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|312867069|ref|ZP_07727279.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097198|gb|EFQ55432.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 883

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVNSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDAARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +I+  +
Sbjct: 649 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|315274509|ref|ZP_07869421.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615859|gb|EFR89075.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 330

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 6/190 (3%)

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           Y+L+RE+  G DG +  +    RVN DLAN +GNL++R+V+MI K +DG IP   G  TE
Sbjct: 1   YYLLREVPFGSDGLFTPEDFVDRVNYDLANDLGNLLNRTVAMINKYFDGEIPAYQGNVTE 60

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA- 444
            D++++   + V++E   +M +     AL Q+ SLVS  ++Y D   PW L K    RA 
Sbjct: 61  FDQTLVDFKNNVVKEYESSMDHMQFSVALNQLWSLVSRTNKYIDETAPWALAKDEDKRAE 120

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-RCFQSL--DQRLKPGFMLH 500
            ++V+    E +R +A+LLQ F+ +   +IF  L + +EN + + S+     +  G  + 
Sbjct: 121 LASVMTHLAETLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEIPAGTTVV 180

Query: 501 KTFDPIFPRF 510
           K   PIFPR 
Sbjct: 181 KKGTPIFPRL 190


>gi|322388625|ref|ZP_08062225.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140545|gb|EFX36050.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|315611716|ref|ZP_07886638.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315316131|gb|EFU64161.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 882

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 471 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 588 TLDQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 648 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLRGEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|270292202|ref|ZP_06198417.1| valine--tRNA ligase [Streptococcus sp. M143]
 gi|270279730|gb|EFA25572.1| valine--tRNA ligase [Streptococcus sp. M143]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGNGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVSNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|319790640|ref|YP_004152273.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317115142|gb|ADU97632.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 879

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 134/364 (36%), Gaps = 37/364 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++    E +F +      + +   +S     +P +  N    ++   ++D  
Sbjct: 345 HCYRCKTVIEPYLTEQWFVKTKPLAQRPIEAVKSGEVKFIPKQWENTFFDWM-YNIRDWC 403

Query: 209 LSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           +SR+ +                             G +     + ++  W  +       
Sbjct: 404 ISRQIWWGHRIPAWYCADCGHVNVAEEAPERCESCGSRNLKQDEDVLDTWFSSALWPFGV 463

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D  D  KA F+P DL V G DI+ F    +    +  +   P             K
Sbjct: 464 FGWPDETDDLKA-FYPTDLLVTGFDIIFFWVARMMMMGYHFTGKRPFADVYVHALVRDEK 522

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SK+ GNVIDP+E++E+ G D LR+ L    A G+D    +  ++       AN + 
Sbjct: 523 GQKMSKTKGNVIDPLEMVEKYGADTLRFTLTALAAQGRDIRLSERIIEG--YRHFANKVW 580

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N V+R V                +   D  IL+  S   QE+   ++    + A   V  
Sbjct: 581 N-VARFVLNAADAAAVEGGASTNYAPEDLWILTKLSETAQEVDRALEGYRFNDAAKAVYQ 639

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     D Y +  K    K T  +R  T   V + V+R+   LL   +P +  +I+  L
Sbjct: 640 FIWNELADWYVEFTKHRLYKGTEQER-RTASQVLLRVLREAMKLLHPIMPFITEEIYQKL 698

Query: 478 FVAD 481
              D
Sbjct: 699 PNKD 702



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           E+ K  +           H+GHA    + DV+ R+ R++G +V +  GTD  G       
Sbjct: 37  EKPKFSVVLPPPNVTGVLHVGHALNSTLQDVICRWKRMNGYEVCWVPGTDHAGIATQWVV 96

Query: 60  -------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        + +Q      +    L  S D      T ++    
Sbjct: 97  ERELAKEGLTRHDVGREEFLKRVWKWKEQYGSRIINQLKKLGTSCDWERERFTMDEGFSR 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             R  +  +  +G IY+G     +  R     +D EV    +         P+   E
Sbjct: 157 AVRRAFVTLYKEGLIYRGKRLINWCPRCHTALSDLEVEHEEEQGNLWYIRYPLVGEE 213


>gi|319939650|ref|ZP_08014009.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811239|gb|EFW07545.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 134/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  E      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVEGDMYVGEEAPEGDGCTQDEDVLDTWFSSALWSFSTMGWPDTDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  ++ 
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDATWN--FINKIWN-ISRYILMNNEEL 588

Query: 374 DGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                +          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDQASENVAKVVAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + ++  LL   +P +  +IF+ +
Sbjct: 649 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQI 701



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAHPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYASTIKQQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|327461992|gb|EGF08321.1| valine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQATDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDAARENVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNDDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|325695108|gb|EGD37010.1| valine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 881

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +  +      R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDQLAKNAIANQATDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNADGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 588 TLDAARENVAQVAVGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 700



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|222153465|ref|YP_002562642.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114278|emb|CAR42908.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 132/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAMANQDTDNKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGDIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDENAEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD- 372
           +EV+E+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MEVVEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNEGL 588

Query: 373 -------YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                  Y   +    A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLAEAESYVAKVAASDAGNVTDRWILHNLNETIVKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVMTRSVLLYTLDKILRLLHPIMPFVTEEIFAQ 700



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T ++   
Sbjct: 94  VEERLRGQGISRYDLGREKFLEKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 QAVKKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|295109458|emb|CBL23411.1| valyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 884

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 148/383 (38%), Gaps = 40/383 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V        ++     V+ M +  +F R+       +   +      +P       + ++
Sbjct: 338 VPHNHSVGTHDRCGTTVEPMIKPQWFVRMDKMAKAAMDALKPGELEFVPPSFGKTYLHWL 397

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           +  ++D  +SR+ +                             G       +  +  W  
Sbjct: 398 E-NIRDWCISRQLWWGHRIPAYYCDECGEVVVAKEMPEKCPKCGCTHLHQDEDTLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        F+P D+ V G DI+ F    + + A   +  +P    + 
Sbjct: 457 SALWPFSTLGWPEKTP-ELEYFYPTDVLVTGYDIIFFWVIRMVFSALEQTGEVPFHHVLI 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI++ G DALR  L+   A G D  +  + ++   N
Sbjct: 516 HGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADALRLTLITGNAPGNDMRFYWERVESSRN 575

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLI 410
              AN I N  SR + M L+      P         D+ ILS  + V++++ +NM    +
Sbjct: 576 --FANKIWN-ASRFIMMNLEGKTVTEPADLNDLCFEDKWILSKLNTVIRDVTDNMDKYEL 632

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFV 466
             A+ +V   + +   D Y +  K   L K + D   A+  L+     + +   LL  ++
Sbjct: 633 GIAVQKVYDFLWDELCDWYIEMAKV-RLWKADEDLKAANDALWTLRTALTEGLKLLHPYM 691

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +  +I+  L    E+    + 
Sbjct: 692 PFITEEIYCTLLPEQESVMISNW 714



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           +++   I         Q H+GHA +  + D+L RF R+ G + L+  GTD          
Sbjct: 35  DKKPFTIVMPPPNVTGQLHMGHALDETMQDILIRFKRMQGYEALWQPGTDHAAIATEVKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  ++    T ++    
Sbjct: 95  IDKLKKEGIDKHDIGREEFLKHAWAWKEEYGGKIINQLKKLGASADWERERFTMDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             + ++ ++ +KG IYKG     +    +   +D EV       ++   + P+   E
Sbjct: 155 AVQEVFIRLYEKGYIYKGSRIINWCPVCQTSISDAEVEHEDQDGFFWHINYPIAGEE 211


>gi|296876999|ref|ZP_06901043.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432034|gb|EFH17837.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLDAARENVAKVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +I+  +
Sbjct: 649 ADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYATTIKQQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|50914656|ref|YP_060628.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822714|sp|Q5XAW8|SYV_STRP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50903730|gb|AAT87445.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 882

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + +   E+         R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDSEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTERQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D+ IL   +  + ++ EN        A   + + + E  
Sbjct: 588 TLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N         V +  + ++  LL   +P +  +I+  
Sbjct: 648 ANWYVELTK-EVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 699



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVVH 192


>gi|225868079|ref|YP_002744027.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701355|emb|CAW98405.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 883

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 131/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNEAGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +++IE  G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDIIETYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   + ++ ++ E+        A   + + + E  
Sbjct: 589 TLEQATANVEQVVSGAAGNVTDRWILHNLNEMIGKVTESFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYAIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKR 101
            +                        + D+ +   ++    L +S     D F  T ++ 
Sbjct: 94  VEERLREQGISRYDLGRDKFLDKVWEWKDEYAATIKEQWGKLGLSLDYARDRF--TLDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 152 LSKAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|238855288|ref|ZP_04645607.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664646|ref|ZP_05865498.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932419|ref|ZP_06337844.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238832180|gb|EEQ24498.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561711|gb|EEX27683.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303368|gb|EFA95545.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 138/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K L   ++  +     ER ++        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  +D+ I    +  ++E+           A  ++ + +     D Y
Sbjct: 588 SDAKPAHMPDVAKFDLADKWIFDRLNHTVKEVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 648 IEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L R  R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEAKLRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHKDD 195


>gi|167755851|ref|ZP_02427978.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
 gi|167704790|gb|EDS19369.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
          Length = 873

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 136/362 (37%), Gaps = 31/362 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++       L       +     ER  +  +     ++D  +SR+   W
Sbjct: 352 VEPYLSKQWFVKMEPLAKAALENQLKDSKVNFVPERFEKTFNQWMENIEDWCISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G ++                           + ++  W  +     +T G+ +       
Sbjct: 411 GHQVPAWYHKETGEVYVGKNPPADLENWKQDEDVLDTWFSSALWPFSTLGWPNTDSELFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 471 RYFPTNTLVTGYDIIFFWVSRMIFQSLHFTEERPFEHVLIHGLIRDEQGRKMSKSLGNGV 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D LR+FL    A G D  Y  + L+   N    N I N     +  I  
Sbjct: 531 DPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLEASWN--FINKIWNSARFVLMNIDD 588

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +      +       D+ IL+  + V++E+  NM         +++   + +     Y +
Sbjct: 589 EMKFEELSFDNLNLCDKWILNRLNEVIREVDINMDKFEFVNVGSELYKFIWDDFCSWYIE 648

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             K   L  TN       L   V V+  +  +L  F+P +  +IF  +   +E+ C    
Sbjct: 649 LTKV-HLNSTNDTEKQASLNTLVYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESICIAIW 707

Query: 490 DQ 491
            +
Sbjct: 708 PE 709



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I         + H+GHA++  + D++ R+ R+ G D L+  G D  G      
Sbjct: 33  TSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMDHAGIATQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R   + L +S D      T +    
Sbjct: 93  VEARMREEGISRYDLGRDGFLEKAWSWKEEYASIIRAQWEKLGLSLDYSKERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  + ++ K+ ++G IY+G     W  ++  A  N + ++K  +G  Y  ++  V   E+
Sbjct: 153 EAVKEVFVKLYNEGLIYQGKRIINWDPVQRTALSNIEVIHKEIEGAMYYFKYQIVDSDEQ 212


>gi|328946814|gb|EGG40951.1| valine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 883

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLYAAREHVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNDDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|289449837|ref|YP_003474971.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184384|gb|ADC90809.1| valine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 885

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 92/385 (23%), Positives = 148/385 (38%), Gaps = 42/385 (10%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E Y  A G  Y    N V+      +F ++    +  L          +P  R +++   
Sbjct: 341 EDYTHAVGTCYRCHTN-VEPKVSLQWFVKMPPLAEPALQAVRDGSIKFVPE-RFSKIYYN 398

Query: 200 VKSGLKDLSLSRKTFDWGIKI-----------------------------PDDPQYIMYV 230
               +KD  +SR+   WG +I                               DP   +  
Sbjct: 399 WMENIKDWCISRQ-LWWGHRIPAWYCAACGKTTVSETEPKVCAHCGATELHQDPD-TLDT 456

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +        G+ +  D  K  F+  D+ V   DI+ F    + + A   +   P   
Sbjct: 457 WFSSALWPFAGFGWPEKTDDLK-YFYQTDVLVTAYDIIFFWVARMIFSALAQTEQPPFHT 515

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGN IDP+ VI+  G DALRY L++  + G D  Y ++ ++ 
Sbjct: 516 VLIHGLVRDSQGRKMSKSLGNGIDPLGVIDRYGADALRYSLIQGNSQGNDFRYQEEKVEA 575

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                  N I N     +    KDY G    P  F   D  ILS   +V+ EI +N+   
Sbjct: 576 --GRAFVNKIWNATRFVLMNFPKDYTGKH-DPSKFLPEDAWILSRLQQVIGEINQNLDKY 632

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            +  ALA++ + + E   D Y +  KP       P R     YV  EV+  +  LL  F+
Sbjct: 633 ELGIALAKIYNFIWEEFCDWYIEMVKPRMNDAAAPSR-DEAFYVLNEVVTAVLKLLHPFM 691

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +++  L +++         Q
Sbjct: 692 PFVTEELYKSLPLSEPTIMLSKWPQ 716



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 50/173 (28%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+   I         Q H+GHA    + D++ R+ R+ G    +  GTD          
Sbjct: 39  ERQPFTIVMPPPNITGQLHLGHALNNTMQDIIIRYKRMQGYAACWMPGTDHASIATEAKI 98

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             A                      +  +      +    L +S D      T +     
Sbjct: 99  VEAMAKEGISKADLSREQFLERAWQWKKEYGGCIVNQLRRLGVSCDWERERFTMDDGMSA 158

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++  + +KG IY+G     Y        +D EV              P+
Sbjct: 159 AVNRVFVNLYNKGLIYRGERMVNYCPYCTTSISDAEVEYEDQATKLCHVRYPL 211


>gi|229100082|ref|ZP_04230989.1| Methionine--tRNA ligase [Bacillus cereus Rock3-29]
 gi|228683331|gb|EEL37302.1| Methionine--tRNA ligase [Bacillus cereus Rock3-29]
          Length = 671

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 84/533 (15%), Positives = 190/533 (35%), Gaps = 36/533 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K  I+     PN   H+GH       AD+L R+ +L G +V + +G D+H   +  
Sbjct: 121 SGKKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPF 180

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDI 119
            A     + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +
Sbjct: 181 KAGQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKL 240

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +      +  + + +  +  V           DG        P   ++      +    
Sbjct: 241 VEKEVDILFCKQCDKHLYEAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCCGS 300

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------WGIK 219
           + +     +          +  +    +K G    +L  +  D             WGI 
Sbjct: 301 EPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCERMLDEDLPDIPISHVSDWGIP 360

Query: 220 IPDD--PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           +P +      +YVW +    Y           N   +   FW       ++  G D   F
Sbjct: 361 VPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWNNQDTTIINFFGYDNGYF 420

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L+   ++ LPK + ++ F   +G K S S G+ +   E++E    D +RY+
Sbjct: 421 HSVLFPAIWLAYSEDITLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLENASHDVVRYY 480

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L        +  +  +     V+ +L     + +      +  ++    P     + +  
Sbjct: 481 LSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLKAEFPNGAPELETLSGNYL 540

Query: 389 SILSVCSRVLQEIRENMQNQLIH--RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                 +R++ EI    +       + +  +  LV    ++   ++   + K N  R +T
Sbjct: 541 MYYQHVNRIVNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVLKNNQQRRNT 600

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            + + +   + LA+     +P     ++  L    + +  + +   L  G  +
Sbjct: 601 AIALELYTAKILALFSSPIMPTFGKMLWGDLGFNVDMQLDEEV-SFLPAGQKV 652


>gi|327462898|gb|EGF09219.1| valine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 882

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 130/355 (36%), Gaps = 40/355 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++      +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQAKDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKIP----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G +IP                       DP  ++  W  +     +T G+ D       +
Sbjct: 412 GHQIPAWYNADGEIYVGEEAPEGDGWTQDPD-VLDTWFSSALWPFSTMGWPDVDSADFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDAARENVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSENEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   +         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSVVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|313471900|ref|ZP_07812392.1| valine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|313449025|gb|EEQ68181.2| valine--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 883

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 138/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K L   ++  +     ER ++        + D  +SR+   W
Sbjct: 356 VEPRLSTQWFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYNKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 475 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 535 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 591

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  +D+ I    +  ++E+           A  ++ + +     D Y
Sbjct: 592 SDAKPAHMPDVAKFDLADKWIFDRLNHTVKEVTRLFDEFQFGEAGREMYNFIWNDFCDWY 651

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 652 IEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 707



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L R  R+ G D L+  G D  G      
Sbjct: 37  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAGIATQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 97  VEAKLRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 157 KAVRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHKDD 199


>gi|237734819|ref|ZP_04565300.1| valyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382147|gb|EEO32238.1| valyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 874

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 136/362 (37%), Gaps = 31/362 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++       L       +     ER  +  +     ++D  +SR+   W
Sbjct: 353 VEPYLSKQWFVKMEPLAKAALENQLKDSKVNFVPERFEKTFNQWMENIEDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G ++                           + ++  W  +     +T G+ +       
Sbjct: 412 GHQVPAWYHKETGEVYVGKNPPADLENWKQDEDVLDTWFSSALWPFSTLGWPNTDSELFK 471

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    +        +G K+SKSLGN +
Sbjct: 472 RYFPTNTLVTGYDIIFFWVSRMIFQSLHFTEERPFEHVLIHGLIRDEQGRKMSKSLGNGV 531

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI+E G D LR+FL    A G D  Y  + L+   N    N I N     +  I  
Sbjct: 532 DPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLEASWN--FINKIWNSARFVLMNIDD 589

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +      +       D+ IL+  + V++E+  NM         +++   + +     Y +
Sbjct: 590 EMKFEELSFDNLNLCDKWILNRLNEVIREVDINMDKFEFVNVGSELYKFIWDDFCSWYIE 649

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             K   L  TN       L   V V+  +  +L  F+P +  +IF  +   +E+ C    
Sbjct: 650 LTKV-HLNSTNDTEKQASLNTLVYVLNAIVKMLHPFMPFVTEEIFQAIPHLEESICIAIW 708

Query: 490 DQ 491
            +
Sbjct: 709 PE 710



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I         + H+GHA++  + D++ R+ R+ G D L+  G D  G      
Sbjct: 34  TSKKPYSIVIPPPNVTGKLHLGHAWDTTLQDMIIRYKRMQGYDALWLPGMDHAGIATQAK 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R   + L +S D      T +    
Sbjct: 94  VEARMREEGISRYDLGRDGFLEKAWSWKEEYASIIRAQWEKLGLSLDYSKERFTLDDGLS 153

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  + ++ K+ ++G IY+G     W  ++  A  N + ++K  +G  Y  ++  V   E+
Sbjct: 154 EAVKEVFVKLYNEGLIYQGKRIINWDPVQRTALSNIEVIHKEIEGAMYYFKYQIVDSDEQ 213


>gi|293364162|ref|ZP_06610889.1| valine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702483|ref|ZP_07639438.1| valyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317340|gb|EFE57766.1| valine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623977|gb|EFO02959.1| valyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 883

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T      +        D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVANKEAGNVTDRWILHNLNGTIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|327382286|gb|AEA53762.1| Valyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385481|gb|AEA56955.1| Valyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 880

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 128/327 (39%), Gaps = 10/327 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 382 KKVTFVPDRFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 441

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ D       +++P D  V G DI+ F    + +    
Sbjct: 442 QQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 502 FTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +  +
Sbjct: 562 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLNETI 618

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +  +          + +       D Y +  K   L   +    +         + 
Sbjct: 619 KQVTDLSERFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEKAKAAKRVNLAYALD 677

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
           Q+  LL   +P +  K++  L  A ++
Sbjct: 678 QILRLLHPVMPFVTEKLWLALPHAGQS 704



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  QKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 95  VEAKLRKEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERFTLDKGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  R ++ ++  +G IY+G Y   +  +     +D EV    D
Sbjct: 155 EAVRKVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDD 197


>gi|70949093|ref|XP_743989.1| tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56523747|emb|CAH77597.1| tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 559

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 128/548 (23%), Positives = 229/548 (41%), Gaps = 70/548 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD----VLFTTGTDEHGQKIAKAAQN 64
           I+T I Y N +PHIGHAY  ++ DV+ RF ++   +    ++F +G DEHG KI    + 
Sbjct: 3   ITTPIYYGNDKPHIGHAYCNVLVDVIYRFEKIKDNENKKKIIFFSGMDEHGLKIDSKTKK 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
             +    +++  S  ++ M  +L +  + F RT+   H    + +WK +  KG IYK  Y
Sbjct: 63  LNMDKTNYLNNISEYYKKMNKMLSVDINLFYRTSNVFHKTFVQHVWKYLLSKGYIYKDVY 122

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR---------------- 168
            G+YS+ +E Y +D EV K    +   A +  +   EE  YFF                 
Sbjct: 123 KGYYSISEERYLSDREVEKMKSEENNTAANRIIYIEEENSYFFDVNKFKDFLINFYKTNE 182

Query: 169 ---LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG---------------------- 203
                +Y  K + Y+  +    + I R N        G                      
Sbjct: 183 SIIFPSYLKKEIEYHIENDFKNVCISRYNTEWGIKIPGEEKGTIYVWFEALLSYISSILY 242

Query: 204 -LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT----------------TGYLD 246
            +K    S+ +         +   I+  + D L+   +                      
Sbjct: 243 VIKKYESSKISSTLPQSKTQEEDNIVCSYEDVLSLVNSCTSVDSRENDAYLENPIMDDKI 302

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  K W   + VIGKDIL+FH I +   L S  + +P+ +  HG I  +  KISKS
Sbjct: 303 CSRKLFEKLWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKIENIKISKS 362

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           L N++ P  ++E+   D +R + +      +D  + +  L +     L N +GNL+ R+V
Sbjct: 363 LNNIVSPFTLLEKYDKDVIRLYFIGSGNIYEDKNFKESNL-ETFELFLRNSVGNLLYRTV 421

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S+ +++   +I     F  +   IL+        + +  +N      L +++ LV ++++
Sbjct: 422 SLCIENNYKIIKKHYLFNFT---ILNEFKSDKTNLIKLFENMEYPLLLEKLMILVKKINK 478

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---EN 483
           YF   +PW  K  +    + ++Y T E I+  +I +  F+P ++  I   +   +   E+
Sbjct: 479 YFVHNEPWN-KLNDSKNFNLIIYETFECIKFFSIFMYPFIPNISLSILKNIGFEEIDHES 537

Query: 484 RCFQSLDQ 491
                L++
Sbjct: 538 VSIDMLNE 545


>gi|302528931|ref|ZP_07281273.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437826|gb|EFL09642.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 875

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 128/362 (35%), Gaps = 36/362 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ +++                I P E   +        + D +
Sbjct: 350 HCSRCDTVVEPRLSLQWWVKVAELAKAAGDAVRDGRTKIHPAE-LEKRYFDWVDNMHDWT 408

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +    ++T G+
Sbjct: 409 ISRQ-LWWGHRIPVWYGPDGEVVCVGPDEQPPSGEGWTQDPDVLDTWFSSGLWPMSTMGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF---LLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+P  +   G DIL F  +    F    +    P              G+
Sbjct: 468 PEETA-DLAKFYPTSVLSTGYDILFFWVVRMMMFGVQEMDGKQPFDHVYLHGLIRDANGK 526

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+E ++  G DA R+ L R    G D     +      + +    + N 
Sbjct: 527 KMSKSRGNVIDPLEWMDAYGADATRFTLARGANPGADMALADEW--AAGSRNFCTKLWN- 583

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            S+   M     DG +P     TESD  IL   + ++ E+    ++    +    +    
Sbjct: 584 ASKFAMMNGATADGELPPAAELTESDRWILGRLAALVSEVDGLFEDFQFAKVANALYQFT 643

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D Y +  K  +L + +  R      V  +V+  +  LL  F+P +  K++  L  
Sbjct: 644 WNELCDWYLELAKV-QLYQGDSARVEATRKVLGQVLDTVLRLLHPFIPFVTEKLWTALTG 702

Query: 480 AD 481
            +
Sbjct: 703 GE 704



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    I           H+GHA    + D ++R  R+ G +VL+  G D  G      
Sbjct: 41  SDKPPFSIVLPPPNVTGSLHMGHALNHTLMDAMSRRRRMQGYEVLWLPGMDHAGIATQNV 100

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                      K  +  +     + + D +D S + F  T ++ 
Sbjct: 101 VERQLAGEGLSRHDLGREKFVERVWEWKAEYGGKILGQMKRLGDGVDWSRERF--TMDEN 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K   D G IY+      +  R +   +D EV    D
Sbjct: 159 LSKAVQTVFKNFYDAGLIYRAERIINWCPRCQTALSDIEVDHSDD 203


>gi|229076690|ref|ZP_04209622.1| Methionine--tRNA ligase [Bacillus cereus Rock4-18]
 gi|228706432|gb|EEL58673.1| Methionine--tRNA ligase [Bacillus cereus Rock4-18]
          Length = 671

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 86/533 (16%), Positives = 192/533 (36%), Gaps = 36/533 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K  I+     PN   H+GH       AD+L R+ +L G +V + +G D+H   +  
Sbjct: 121 SGKKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPF 180

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDI 119
            A     + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +
Sbjct: 181 KAGQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKL 240

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +      +  + + +  +  V           DG        P   ++      +    
Sbjct: 241 VEKEVDILFCKQCDKHLYEAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPSCKCCGS 300

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------WGIK 219
           + +     +          +  +    +K G    +L  +  D             WGI 
Sbjct: 301 EPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCERMLDEDLPDIPISHVSDWGIP 360

Query: 220 IPDD--PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           +P +      +YVW +    Y           N   + + FW       ++  G D   F
Sbjct: 361 VPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLSDFWNNQDTTIINFFGYDNGYF 420

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L+   ++ LPK + ++ F   +G K S S G+ +   E++E    D +RY+
Sbjct: 421 HSVLFPAIWLAYSEDITLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLENASHDVVRYY 480

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L        +  +  +     V+ +L    G+ +      +  ++    P     + +  
Sbjct: 481 LSYSRPETVETNFTMEEFNHIVDTNLNQEWGSWLHDLKCKLEAEFPNGAPELETLSGNYL 540

Query: 389 SILSVCSRVLQEIRENMQNQLIH--RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                 +R++ EI    +       + +  +  LV    ++   ++   + K N  R +T
Sbjct: 541 MYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVLKNNQQRRNT 600

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            + + +   + LAI     +P     ++  L    + +  + +   L  G  +
Sbjct: 601 AIALELYTAKILAIFSSPIMPTFGKMLWGDLGFNVDMQLDEEV-SFLPAGQKV 652


>gi|116494743|ref|YP_806477.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191638254|ref|YP_001987420.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|301066302|ref|YP_003788325.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116104893|gb|ABJ70035.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712556|emb|CAQ66562.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|300438709|gb|ADK18475.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 880

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 128/327 (39%), Gaps = 10/327 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 382 KKVTFVPDRFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 441

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ D       +++P D  V G DI+ F    + +    
Sbjct: 442 QQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 502 FTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +  +
Sbjct: 562 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLNETI 618

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +  +          + +       D Y +  K   L   +    +         + 
Sbjct: 619 KQVTDLSERFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEKAKAAKRVNLAYALD 677

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
           Q+  LL   +P +  K++  L  A ++
Sbjct: 678 QILRLLHPVMPFVTEKLWLALPHAGQS 704



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  QKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 95  VEAKLRKEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERFTLDKGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  R ++ ++  +G IY+G Y   +  +     +D EV    D
Sbjct: 155 EAVRKVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDD 197


>gi|24380137|ref|NP_722092.1| valyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81450887|sp|Q8DSL1|SYV_STRMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24378137|gb|AAN59398.1|AE015005_4 putative valyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 883

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       ++  ++  +      R N+        + D  +SR+   
Sbjct: 352 PIEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LW 410

Query: 216 WGIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           WG +I                         + ++  W  +     +T G+ D       +
Sbjct: 411 WGHQIPAWYNADGDMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTDSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGCRPFQNVLIHGLIRDEQGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++V+++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVVDKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                 +              +D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LSLDQASKNVVLVTNGKAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             D Y +  K   L   +         V +  + ++  LL   +P +  +IF  
Sbjct: 648 FADWYVELTK-EVLYSEDEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLPDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T ++   
Sbjct: 94  VEARLAEDGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +  +     +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIH 193


>gi|309799540|ref|ZP_07693769.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116816|gb|EFO54263.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 883

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + +   N        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +  +    V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKAITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|302338655|ref|YP_003803861.1| valyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635840|gb|ADK81267.1| valyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 881

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 142/373 (38%), Gaps = 18/373 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + +   G  Y+        + ++ +     +   AD      + + V++  ++      S
Sbjct: 339 EHLHQVGHCYRCDTVIEPYMSEQWFV---RMKSLADKALAAWEKDEVRFYPKKWENTYTS 395

Query: 171 AYQDKLLSYYESHPEF--ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
             ++           +   +P+   N+    +       + S         +  DP  ++
Sbjct: 396 WLKNIRDWCISRQLWWGHRIPVWYCNDCGQMMVCREDPSTCSACGSS---SLRQDPD-VL 451

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPL 286
             W  +     +T G+ +  +  K +F+P    V G DI+ F    +   +      +P 
Sbjct: 452 DTWFSSWLWPFSTLGWPEKSEDLK-RFFPTSSLVTGYDIIFFWVARMIMSSLEFLGEVPF 510

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                +      +G K+SKSLGN +DP+E+++E G DA+++ L    A G+D    KD  
Sbjct: 511 RDIYITGLVRDKQGRKMSKSLGNGMDPLEIVDEFGADAMKFTLAFLAAQGQDILLAKDDF 570

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           K    +  AN I N  +R + M L+  + + P        D  I    +     + + M+
Sbjct: 571 K--FGSKFANKIWN-ATRFLLMNLEGRELLDPESVERKPLDRWIFHRLNEASAAVAKAME 627

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +   + A   V         D Y +A K   L   + D  +  + + ++V+ +   L   
Sbjct: 628 SYRFNDAANAVYEFFWSDFCDWYIEASK-LSLYSDDDDEKNRAVTLLMQVLEESMRLAHP 686

Query: 465 FVPKLANKIFDIL 477
           F+  +  +I+  L
Sbjct: 687 FLSFITEEIYQKL 699



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GH     + D+L R++R+ G   L+  GTD  G       + 
Sbjct: 37  KPFVIVIPPPNVTGVLHMGHGLNNSLQDILIRYYRMTGRPTLWLPGTDHAGIATQNVVEK 96

Query: 65  AGVTT------------KVFVDQNSRNF--------RDMADVLDISYDDFIRTTEKRHHD 104
                                 +             + +    D S + F  T ++    
Sbjct: 97  RLRAKGTSRRELGREKFLEETWKVKEEHHAVIIRQLKKIGASCDWSRERF--TLDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G IY+G Y   +        +DDEV  
Sbjct: 155 AVREVFVSLYERGLIYRGNYLVNWCPSCGTALSDDEVDH 193


>gi|329768992|ref|ZP_08260415.1| valyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328835799|gb|EGF85522.1| valyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 879

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/356 (21%), Positives = 139/356 (39%), Gaps = 34/356 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHP-EFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F  +    DK+L   +    +      R    ++     ++D  +SR+   
Sbjct: 353 VEPYLSKQWFVAMKPLADKVLENQKDKDGKVNFYPPRFEHTLNTWMENIQDWCISRQ-LW 411

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ D      
Sbjct: 412 WGHRIPAWYHKETGEVYVDVNPPKDIENYVQDEDVLDTWYSSALFPFSTLGWPDLESEDF 471

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN 
Sbjct: 472 KRYYPNSCLVTGYDIIFFWVARMVFQGLEFTGVRPFEDCLIHGLVRDEQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP+EVIEE G D+LRYFL      G+D  Y  + ++   N    N I N  SR V M L
Sbjct: 532 VDPMEVIEEYGADSLRYFLATNSTPGQDLRYSTEKIEASWN--YINKIWN-ASRFVIMNL 588

Query: 371 KDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           + ++       G  T +D+ IL+  ++ +++     +      A   + + V E     Y
Sbjct: 589 EGFEYSDIDLSGEKTLADKYILTKLAKTIEDFERLFEKYEFGEASRILYNFVWEEFCSWY 648

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  K   L   +    +T   + V V+     +L  F+P +  +I+  +    ++
Sbjct: 649 IEIAK-ISLNGEDEAAKNTTKSILVYVLDASLKMLHPFMPFVTEEIWQHIPHEGDS 703



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         + HIGHA++  + D+L R+ RL G DVL+  G D  G      
Sbjct: 33  SKKNPYTIVIPPPNVTGKLHIGHAWDTTLQDMLTRYKRLKGFDVLYLPGMDHAGISTQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            +                        + ++ +   R+      L + Y     T ++  +
Sbjct: 93  VEAKMREEGISRYDLGREKFLERAWDWKEEYAGYIREQWAKLGLGLDYTRERFTLDEGLN 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                ++      G IY+G     W  ++  A  N + ++K  +G +Y+ ++
Sbjct: 153 KAVTKIFVDHYKNGTIYRGERIINWDPVQKTALSNIEVIHKDVEGAFYHLKY 204


>gi|227535262|ref|ZP_03965311.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187146|gb|EEI67213.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 880

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 128/327 (39%), Gaps = 10/327 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 382 KKVTFVPDRFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 441

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ D       +++P D  V G DI+ F    + +    
Sbjct: 442 QQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 502 FTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +  +
Sbjct: 562 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLNETI 618

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +  +          + +       D Y +  K   L   +    +         + 
Sbjct: 619 KQVTDLSERFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEKAKAAKRVNLAYALD 677

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
           Q+  LL   +P +  K++  L  A ++
Sbjct: 678 QILRLLHPVMPFVTEKLWLALPHAGQS 704



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  QKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +   +
Sbjct: 95  VEAKLRKEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERFTLDTGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  R ++ ++  +G IY+G Y   +  +     +D EV    D
Sbjct: 155 EAVRKVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDD 197


>gi|239631662|ref|ZP_04674693.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526127|gb|EEQ65128.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 883

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 128/327 (39%), Gaps = 10/327 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 385 KKVTFVPDRFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 444

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ D       +++P D  V G DI+ F    + +    
Sbjct: 445 QQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 504

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 505 FTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 564

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D +    P P  F  SD+ + +  +  +
Sbjct: 565 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLEKPQQPDPSTFDLSDKWLFAQLNETI 621

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +  +          + +       D Y +  K   L   +    +         + 
Sbjct: 622 KQVTDLSERFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEKAKAAKRVNLAYALD 680

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN 483
           Q+  LL   +P +  K++  L  A ++
Sbjct: 681 QILRLLHPVMPFVTEKLWLALPHAGQS 707



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 38  QKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIREKRMQGFDTLWLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 98  VEAKLRKEGISRYDLGRDKFVQKVWEWKDEFAKTIHSQWAKMGLSLDYSRERFTLDKGLN 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  R ++ ++  +G IY+G Y   +  +     +D EV    D
Sbjct: 158 EAVRKVFVELYKQGLIYRGEYIVNWDPQARTALSDIEVIHEDD 200


>gi|325687152|gb|EGD29175.1| valine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 882

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 40/355 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKIP----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G +IP                       DP  ++  W  +     +T G+ D       +
Sbjct: 412 GHQIPAWYNAGGEIYVGEEAPKGDEWIQDPD-VLDTWFSSALWPFSTMGWPDIDSADFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + +     +   P    +        +G K+SKSLGN ID
Sbjct: 471 YYPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
                        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDAARENVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LLQ  +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLQPIMPFVTEEIFGQI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   +         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSVVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|300788561|ref|YP_003768852.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299798075|gb|ADJ48450.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 873

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 128/362 (35%), Gaps = 36/362 (9%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E   +        + D +
Sbjct: 350 HCSRCDTVVEPRLSLQWWVKVEELAKLAGDAVRDGRTKIHPPE-LGKRYFDWVDNMHDWT 408

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +    ++T G+
Sbjct: 409 ISRQ-LWWGHRIPVYYGPDGEVVCVGPDEQPPSGEGWTQDPDVLDTWFSSGLWPMSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA---FLLSANLPLPKKVFSHGFILHKGE 301
             + +   AKF+P  +   G DIL F  +         +    P             +G+
Sbjct: 468 PSSSE-DLAKFYPTSVLSTGYDILFFWVVRMMMFGVHQMDGKQPFDHVYLHGLIRDAQGK 526

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+E ++  G DA R+ L R    G D     +      + +    + N 
Sbjct: 527 KMSKSRGNVIDPLEWMDAYGADATRFTLARGANPGADMALADEW--AAGSRNFCTKLWN- 583

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            ++   M        +P+ G  TE+D  IL     ++ E+    ++    +    +    
Sbjct: 584 ATKFAMMNGASVAAPLPSAGELTEADRWILGRLGALVSEVDGLFEDFQFAKVAGALYQFT 643

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D Y +  K  +L + +  RA+    V   V+  +  LL  F+P +  K++  L  
Sbjct: 644 WNELCDWYLELAKV-QLYQGDDARAAATRSVLGHVLDTVLRLLHPFIPFITEKLWTALTG 702

Query: 480 AD 481
            +
Sbjct: 703 GE 704



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
             +    I           H+GHA    + D ++R  R+ G +VL+  G D  G      
Sbjct: 41  SGKPPFSIVLPPPNVTGSLHMGHALNHTLMDAMSRRRRMQGYEVLWLPGMDHAGIATQNV 100

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                      K  +  +     + + D +D S + F  T ++ 
Sbjct: 101 VERQLAGEGLSRHDLGREKFVERVWEWKAEYGGKILGQMKRLGDGVDWSRERF--TMDEN 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K   D+G IY+      +  R +   +D EV    D
Sbjct: 159 LSKAVQTVFKNFFDEGLIYRAERIINWCPRCQTALSDIEVDHNDD 203


>gi|227889741|ref|ZP_04007546.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849605|gb|EEJ59691.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 879

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/347 (20%), Positives = 136/347 (39%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +K+L   ++  +     ER    +    S + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDEDSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNTLVTGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V++E G DALR+FL+   A G+D  YD   +    N    N I N     +  + 
Sbjct: 530 VDPMDVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           +D     +P    F  +D  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 EDAKPAHMPDTSKFDLADSWIFDRLNHTVSEVTRLFDEYQFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L   + +  +      + ++ Q+  LL   +P +  K++
Sbjct: 648 IEISKV-ALNGDDEELKARKQENLIWILDQILRLLHPIMPFVTEKLW 693



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    T                   + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRTQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDD 195


>gi|58337105|ref|YP_193690.1| valyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311486|sp|Q5FKW5|SYV_LACAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58254422|gb|AAV42659.1| valine-tRNA ligase [Lactobacillus acidophilus NCFM]
          Length = 879

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 80/402 (19%), Positives = 155/402 (38%), Gaps = 37/402 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++   +    L++E Y    E    + G    +    V+    + +F ++    
Sbjct: 310 YAGMDRFECREALVKDLKEEGYLIKVEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           DK+L   +S  +     ER  + ++     + D  +SR+   WG +IP            
Sbjct: 369 DKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQ-LWWGHRIPAWYNKKTGETYV 427

Query: 222 ------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                        DP  ++  W  +     +T G+ D  +    +++P +  V G DI+ 
Sbjct: 428 GEEAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDNPDFKRYFPTNALVTGYDIIF 486

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    + + +   +   P    V        +G K+SKSLGN IDP++VI++ G DALR+
Sbjct: 487 FWVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRW 546

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+   A G+D  +    +    N    N I N+    +  + +D     +P    F  S
Sbjct: 547 FLLNGTAPGQDTRFSYTKMDAAWN--FINKIWNVSRFVIMNLPEDAKPAHMPDTSKFDLS 604

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D+ I    +  + E+           A  +  + +     D Y +  K   L   + +  
Sbjct: 605 DKWIFDRLNHTIGEVTRLFGEYQFGEAGREAYNFIWNDFCDWYIEISKV-ALNGDDEELK 663

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 664 ARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R++G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHEMGREAFVKQVWDWKDEYANIIKSQWSKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    E   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPTLETALSDIEVIHKDD 195


>gi|313889902|ref|ZP_07823543.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121750|gb|EFR44848.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 883

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 67/353 (18%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++     + ++  ++         R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDELAKQAMANQDTENRVDFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGDIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++V+E+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVVEKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLAEAESNVAKVAASEAGNVTDRWILHNLNETIVKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N +       V +  + ++  LL   +P +  +I+  
Sbjct: 649 ANWYVELTK-EVLYSNNEEEKVMTRSVLLYTLDKILRLLHPIMPFVTEEIYAQ 700



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T ++   
Sbjct: 94  VEERLREQGITRYDLGREKFLEKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|325696381|gb|EGD38272.1| valine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 883

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 40/355 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQATDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKIP----------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G +IP                       DP  ++  W  +     +T G+ D       +
Sbjct: 412 GHQIPAWYNANGEIYVGEEAPEGDEWIQDPD-VLDTWFSSALWPFSTMGWPDVNSEDFKR 470

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN ID
Sbjct: 471 YFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGID 530

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P++VI++ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  + 
Sbjct: 531 PMDVIDKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEG 587

Query: 373 YDGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
               +        +        D  IL   +  + ++ EN        A   + + + + 
Sbjct: 588 LTLDVAREHVAQVAAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDE 647

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 648 FADWYVELTK-EVLYSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLREQGISRYDLGREKFLNKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|269792560|ref|YP_003317464.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100195|gb|ACZ19182.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 883

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 134/377 (35%), Gaps = 46/377 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V       +       V+    E +F R     +  +          +P    N    ++
Sbjct: 338 VEHSHSVGHCYRCQTVVEPYLSEQWFVRAKPLAEVGVRAVREGKIKWIPESWVNVYYQWM 397

Query: 201 KSGLKDLSLSRKTFDWGIKIP-------------DDPQY--------------IMYVWID 233
           +  ++D  +SR+   WG +IP              DP +              ++  W  
Sbjct: 398 E-NIRDWCISRQ-LWWGHRIPAWYCSCGHVIVDEVDPTHCPECGSSNLVQDEDVLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +     +T G+ ++    ++ F+P  L V G DI+ F    W A ++   L     V  H
Sbjct: 456 SALWPFSTMGWPEDTKELRS-FYPTGLLVTGFDIIFF----WVARMIMMGLEFMGDVPFH 510

Query: 294 GFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +       +G+K+SKS GNVIDP+++IE+ G DALR  L      G+D       ++
Sbjct: 511 HVYIHALVRDERGQKMSKSKGNVIDPLDLIEKYGADALRMTLAALTVQGRDICLSASRVE 570

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQ 406
                   N + N  SR   M L   D   P         D  IL    +V  ++ + + 
Sbjct: 571 --TYRFFLNKLWN-ASRFALMNLDGVDPGSPIDLKNLRIHDRWILRRLDQVKAQLADLLD 627

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 +   +         D Y +  KP         R S    V +EV R L  ++  
Sbjct: 628 GYFFGESARLLYDFTWSELCDWYLEMAKPALRGDEGEPRRSATQRVLLEVFRDLLRMMHP 687

Query: 465 FVPKLANKIFDILFVAD 481
           F+P +  +++       
Sbjct: 688 FIPFVTEELWHHFPFGG 704



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  +           H+GHA    + D++ R+ R+ G +VL+  GTD  G       +
Sbjct: 37  KPKFGVVIPPPNVTGSLHMGHALNNTLQDIICRYKRMRGHEVLWLPGTDHAGIATQNVVE 96

Query: 64  NAGVT----------------TKVFVDQNSRNF----RDMADVLDISYDDFIRTTEKRHH 103
               +                   + +Q         + +    D S + F  T ++   
Sbjct: 97  RHLASQGISRHDLGREAFVEKVWEWKEQYGSRIIGQLKKLGASCDWSRERF--TMDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  K  IY+G Y   +  R     +D EV  
Sbjct: 155 RAVRKVFVELYKKDLIYRGKYLINWCPRCRTALSDLEVEH 194


>gi|227903677|ref|ZP_04021482.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868564|gb|EEJ75985.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 879

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 80/402 (19%), Positives = 154/402 (38%), Gaps = 37/402 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++   +    L++E Y    E    + G    +    V+    + +F ++    
Sbjct: 310 YAGMDRFECREALVKDLKEEGYLIKVEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           DK+L   +S  +     ER  + ++     + D  +SR+   WG +IP            
Sbjct: 369 DKVLENQKSEGKVNFVPERFEQTLNHWMENVHDWVISRQ-LWWGHRIPAWYNKKTGETYV 427

Query: 222 ------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                        DP  ++  W  +     +T G+ D  +    +++P +  V G DI+ 
Sbjct: 428 GEEAPKDIENWEQDPD-VLDTWFSSALWPFSTMGWPDTDNPDFKRYFPTNALVTGYDIIF 486

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    + + +   +   P    V        +G K+SKSLGN IDP++VI++ G DALR+
Sbjct: 487 FWVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPMDVIDKYGADALRW 546

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
           FL+   A G+D  +    +    N    N I N     +  + +D     +P    F  S
Sbjct: 547 FLLNGTAPGQDTRFSYTKMDAAWN--FINKIWNASRFVIMNLPEDAKPAHMPDTSKFDLS 604

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D+ I    +  + E+           A  +  + +     D Y +  K   L   + +  
Sbjct: 605 DKWIFDRLNHTIGEVTRLFGEYQFGEAGREAYNFIWNDFCDWYIEISKV-ALNGDDEELK 663

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 664 ARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R++G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHEMGREAFVKQVWDWKDEYANIIKSQWSKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    E   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPTLETALSDIEVIHKDD 195


>gi|306824631|ref|ZP_07457976.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304433199|gb|EFM36170.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 882

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVDFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEMYVGEEAPKGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNECL 587

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 588 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 648 ADWYVELTK-EVLYSDNEEEKFITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLRGEGISRYDLGREKFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|118580003|ref|YP_901253.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502713|gb|ABK99195.1| valyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 886

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/361 (19%), Positives = 132/361 (36%), Gaps = 39/361 (10%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ ++    ++ L   +     ILP +  N    +++  ++D  +
Sbjct: 347 CYRCKTVVEPYLSLQWYVKVGPLAERALQAVKEGKTRILPKQWENTYYDWME-NIRDWCI 405

Query: 210 SRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTT 242
           SR+ +                             G         ++  W  +     +T 
Sbjct: 406 SRQIWWGHRIPAWFCDHCGGVTVAMEDPTSCSACGSDEIHQETDVLDTWFSSALWPFSTM 465

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+ D       +F+P    V G DIL F    +          +P              G
Sbjct: 466 GWPDKTP-ELERFYPTSCLVTGFDILFFWVARMMMMGLHFMDQVPFTDVYIHALVRDAHG 524

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNVIDP+ +I++ G DA R+ L    A G+D    ++ +      +  N + N
Sbjct: 525 QKMSKSKGNVIDPLTIIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFCNKVWN 582

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             +R   M L  +D    T G  + S  D+ IL   +   + + E++     + + + + 
Sbjct: 583 -AARFTLMNLDGFDPDGITLGELSLSAGDKWILHRLNETARLVDESLTGYRYNESASALY 641

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K  +L    P+R  T  YV    +  L  LL  F+P +  +I+  
Sbjct: 642 QFTWSEFCDWYLELSKQ-DLYNGTPERKKTSQYVLWYTLDHLLRLLHPFMPFITEEIWQA 700

Query: 477 L 477
           L
Sbjct: 701 L 701



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 34  SDNKPYSIVIPPPNVTGALHMGHALNNTMQDILCRWKRMQGHNVLWMPGTDHAGIATQNV 93

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                               Q     + +    D   + F  T +  
Sbjct: 94  VERQLAAEGMDRHDLGRDAFIQRVWKWKAESGGQIIGQLKRLGASCDWERERF--TMDAG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++ K+   G IY+      +  R     +D EV       ++     PV
Sbjct: 152 LSKAVRTVFVKLHQDGLIYRDNRLINWCPRCHTALSDIEVEHEEQKGHFWHIRYPV 207


>gi|256850916|ref|ZP_05556305.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661130|ref|ZP_05862044.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934172|ref|ZP_06339450.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615978|gb|EEU21166.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548067|gb|EEX24043.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301786|gb|EFA94052.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 138/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K L   ++  +     ER ++        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  +D+ I    +  ++E+           A  ++ + +     D Y
Sbjct: 588 SDAKPAHMPDVAKFDLADKWIFDRLNHTVKEVNRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + D  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 648 IEISKV-ALNGDDEDLKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L R  R+ G D L+  G D  G  +   
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAGIAMQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEAKLRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHQDD 195


>gi|329116643|ref|ZP_08245360.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907048|gb|EGE53962.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 883

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  E+  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQETDGKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEIYVGEEEPDGDEWVQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTDQRPFQNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAFTES--------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                       +        D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLEEAERNVAKIAKSEAGNVTDRWILHNLNETIVKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + Y +  K   L   N         V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ANWYVELTK-EVLYSENEAEKVMTRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  KTAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + IS D      T +    
Sbjct: 94  VEERLREQGISRYDLGREKFLEKVWDWKDEYASTIKEQWGKMGISVDYSRERFTLDDGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|297205794|ref|ZP_06923189.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148920|gb|EFH29218.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 883

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 138/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    +K L   ++  +     ER ++        + D  +SR+   W
Sbjct: 356 VEPRLSTQWFVKMKPLAEKALENQKTAGKIDFVPERFSQTFEQWMENVHDWVISRQ-LWW 414

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ D       
Sbjct: 415 GHRIPAWYNKETGEMYVGEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFK 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 475 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGI 534

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 535 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 591

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  +D+ I    +  ++E+           A  ++ + +     D Y
Sbjct: 592 SDAKPAHMPDVAKFDLADKWIFDRLNHTVKEVNRLFDEFQFGEAGREMYNFIWNDFCDWY 651

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + D  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 652 IEISKV-ALNGDDEDLKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 707



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L R  R+ G D L+  G D  G  +   
Sbjct: 37  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRLKRMQGYDTLYLPGMDHAGIAMQAK 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 97  VEAKLRKQGLDRHQMGREKFVKQVWDWKDEYANIIKSQWAKLGLSLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 157 KAVRKVFVQLYNEGLIYRGQYIINWDPKLETALSDIEVIHQDD 199


>gi|307710823|ref|ZP_07647251.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617429|gb|EFN96601.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 883

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEIYVGEEAPEGEGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + +   N        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITSSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLKKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|331265790|ref|YP_004325420.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682462|emb|CBZ00079.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 883

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTDRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 589 TLEQATANVEKVINKEAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRERFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|269125779|ref|YP_003299149.1| valyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310737|gb|ACY97111.1| valyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 883

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/357 (20%), Positives = 130/357 (36%), Gaps = 41/357 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+      +F +++                I P E       +V   + D  
Sbjct: 368 HCQRCSTVVEPRVSLQWFVKVAPLAKAAGDAVRDGRVRIHPPEMAARYFEWVD-NMHDWC 426

Query: 209 LSRKTFDWG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLD 246
           +SR+   WG  I +   P                      ++  W  +    L+T G+ D
Sbjct: 427 ISRQ-LWWGHRIPVWYGPNGEVCCPGPDEEPPAGWTQDPDVLDTWFSSALWPLSTLGWPD 485

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                  +F+P  + V G DIL F     + +  + +    P              G+K+
Sbjct: 486 RTA-DLERFYPTSVLVTGYDILFFWVARMMMFGLYAMDGVEPFKVIALHGMVRDQYGKKM 544

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP+E IE  G DA R+ L+R    G D    ++  +   N        N + 
Sbjct: 545 SKSFGNVVDPLEWIERYGADATRFTLLRGANPGGDVPIAEEWAQGSRN------FCNKLW 598

Query: 364 RSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +    L +   +    P   +++D  ILS    V+ E+  +M++    +A   +     
Sbjct: 599 NATRFALMNGAHVRGELPQELSDADAWILSRLQHVIAEVDRHMEDFEFAKACEALYHFAW 658

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   D Y +  K     +   +RA     V  EV+ +L  LL   VP +  +++  L
Sbjct: 659 DEVCDWYVELAK----VQLQDERAEATRRVLGEVLDKLLRLLHPIVPFVTEELWTSL 711



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 52/160 (32%), Gaps = 22/160 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA +  I D L R  R+ G + L+  GTD  G       +
Sbjct: 61  RPAFSIVIPPPNVTGSLHVGHALDHSIQDALIRRRRMQGYETLWLPGTDHAGIATQNVVE 120

Query: 64  NAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                          +     R + D +D + + F  T ++   
Sbjct: 121 RELAKEGLSRHDLGREAFVERVWQWKAESGGKILGQMRRLGDSVDWTREAF--TMDEPRA 178

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++K++ D G IY+      +  R     +D EV  
Sbjct: 179 RAVRTIFKRLFDDGLIYRAERIINWCPRCLTALSDIEVEH 218


>gi|229107186|ref|ZP_04237171.1| Methionine--tRNA ligase [Bacillus cereus Rock3-28]
 gi|228676257|gb|EEL31117.1| Methionine--tRNA ligase [Bacillus cereus Rock3-28]
          Length = 671

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/533 (16%), Positives = 190/533 (35%), Gaps = 36/533 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K  I+     PN   H+GH       AD+L R+ +L G +V + +G D+H   +  
Sbjct: 121 SGKKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVFYMSGADDHQSYVPF 180

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDI 119
            A     + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +
Sbjct: 181 KAGQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKL 240

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +      +  + + +  +  V           DG        P   ++      +    
Sbjct: 241 VEKEVDILFCKQCDKHLYEAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCCGS 300

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------WGIK 219
           + +     +          +  +    +K G    +L  +  D             WGI 
Sbjct: 301 EPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCERMLDEDLPDIPISHVSDWGIP 360

Query: 220 IPDD--PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           +P +      +YVW +    Y           N   +   FW       ++  G D   F
Sbjct: 361 VPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWKNKDTTIINFFGYDNGYF 420

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L+   ++ LPK + ++ F   +G K S S G+ +   E++E    D +RY+
Sbjct: 421 HSVLFPAIWLAYSEDINLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLENASHDVVRYY 480

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L        +  +  +     V+ +L     + +      +  ++    P     + +  
Sbjct: 481 LSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLEAEFPNGAPELETLSGNYL 540

Query: 389 SILSVCSRVLQEIRENMQNQLIH--RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                 +R++ EI    +       + +  +  LV    ++   ++   + K N  R +T
Sbjct: 541 MYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVLKNNQQRRNT 600

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            + + +   + LAI     +P     ++  L    E +  + +   L  G  +
Sbjct: 601 AIALELYTAKILAIFSSPIMPTFGKMLWGDLGFNVEMQLDEEV-SFLPAGQKV 652


>gi|227892642|ref|ZP_04010447.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865513|gb|EEJ72934.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 879

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/448 (18%), Positives = 161/448 (35%), Gaps = 48/448 (10%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     +      R     +++  DD   T  +                 D +       
Sbjct: 275 TPAHDPNDFQVGNRHNLKRINVMNDD--GTMNEECGK---------YAGMDRFDCREQLV 323

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
             L++E Y    E    + G    +    V+    + +F ++    DK+L   ++  +  
Sbjct: 324 KDLKEEGYLIKIEPIVHSVGHSERSGVQ-VEPRLSKQWFVKMKPLADKVLENQKTAGKVN 382

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------DD 223
              ER    +      + D  +SR+   WG +IP                         D
Sbjct: 383 FVPERFEGTLDHWMEDVHDWCISRQ-LWWGHRIPAWYNKKTGETYVGVEAPKDAENWEQD 441

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+ D       +++P +  V G DI+ F    + + +   +
Sbjct: 442 PD-VLDTWFSSALWPFSTLGWPDTDSADFKRYFPTNALVTGYDIIFFWVSRMMFQSLHFT 500

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P    V        +G K+SKSLGN +DP++V+++ G DALR+FL+   A G+D  Y
Sbjct: 501 GKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVDKYGADALRWFLLNGTAPGQDTRY 560

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQE 400
           D   L    N    N I N     +  + +D     +P    F  +D  I    + V+ E
Sbjct: 561 DPKKLSAAWN--FINKIWNASRFVIMNLPEDAKPAHMPDVSKFDLADSWIFDRLNHVVGE 618

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +           A  ++ + +     D Y +  K   L   + +  +      + ++ Q+
Sbjct: 619 VIRLFDEYKFGEAGRELYNFIWNDFCDWYIEISK-IALNGDDEELKARKQDNLIWILDQI 677

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF 486
             L+   +P +  K++  L +  E +  
Sbjct: 678 LRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYAAIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVKKVFVQLYNEGLIYRGEYIINWDPALQTALSDIEVIHKDD 195


>gi|206900916|ref|YP_002250812.1| valyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740019|gb|ACI19077.1| valyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 881

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 142/383 (37%), Gaps = 37/383 (9%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               D    +    P++ +  + +F R+       +   E      +P  R  +V     
Sbjct: 338 PYIHDLATCDRCGTPIEPLISKQWFMRMENIAKPAIEVVEKGEVKFVPD-RWKKVYFDWM 396

Query: 202 SGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWIDA 234
             +KD  LSR+ +                             G K     + ++  W  +
Sbjct: 397 YNIKDWCLSRQLWWGHRIPAWYCEDCGHINVEEKQPEKCEKCGSKNLKQDEDVLDTWFSS 456

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
               L T G+ ++ +     F+P  +    +DI+      +         ++P       
Sbjct: 457 ALWPLGTLGWPEDTE-DLNYFYPTSVLSTARDIINLWVARMIMMGLEFKGDIPFYYVYVH 515

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  +G+++SKS G  +DP+E+I + G D  R+ L  +    +D  + ++  +   N 
Sbjct: 516 PTVLTREGKRMSKSKGTGVDPLELINKYGADVTRFGLAIQCTEMQDLRFHEENFENTKN- 574

Query: 353 DLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
              N I N     +S +    +Y+ +  +  + + SD+ IL+   +V++E+ E+++N   
Sbjct: 575 -FTNKIWNAARFVISNLDFNLNYNEVDLSKHSLSLSDKWILTRLQKVIREVTEHLENFRF 633

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              +  + +       D Y +  KP      +P+       +   V+++   LL   +P 
Sbjct: 634 SEYVKTIYNFFWSEFCDWYIELSKPRLSSTEDPESKLIAQVILWRVLKESMQLLHPVMPF 693

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +  +I+  L   DE+       +
Sbjct: 694 ITEEIWQKLPSTDESIMISKWPE 716



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 61/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I           H+GHA    I D+L R+ R+ G + L+  GTD  G      
Sbjct: 34  KNKKPYSIVLPPPNITGSLHMGHALNATIQDILIRWRRMQGFNALWIPGTDHAGIATQMV 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +   +                    + ++      +    L +S D   F  T ++ + 
Sbjct: 94  VERELLKEGKTRWDLGREKFLERVWQWKEKYGNTIVEQLKRLGVSCDWKRFRFTMDEVYS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                 + ++  KG IYKG     +  R +   +D E+    +  +      P+   +
Sbjct: 154 RAVIKAFVELYKKGYIYKGERIINWCPRCKTALSDLEIKYVEENSFLWHIKYPLHNED 211


>gi|320187431|gb|EFW62121.1| Methionyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 326

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/313 (25%), Positives = 141/313 (45%), Gaps = 36/313 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T  + +     +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +G +
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDILRFH 271
           IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+ FH
Sbjct: 243 IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFH 302

Query: 272 AIYWPAFLLSANL 284
           +++WPA L  +N 
Sbjct: 303 SLFWPAMLEGSNF 315


>gi|182683501|ref|YP_001835248.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303255236|ref|ZP_07341309.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260058|ref|ZP_07346031.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261242|ref|ZP_07347190.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263907|ref|ZP_07349828.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267057|ref|ZP_07352928.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269272|ref|ZP_07355046.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|182628835|gb|ACB89783.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301801447|emb|CBW34135.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597777|gb|EFL64850.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637376|gb|EFL67863.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638753|gb|EFL69215.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641169|gb|EFL71542.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643385|gb|EFL73661.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646312|gb|EFL76538.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|149012557|ref|ZP_01833554.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763362|gb|EDK70299.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|168490541|ref|ZP_02714684.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574795|gb|EDT95323.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|148983947|ref|ZP_01817266.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147924094|gb|EDK75206.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799625|emb|CBW32180.1| valyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 131/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 ------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                 D    + T  A   +D  IL   +  + +   N        A   + + + E  
Sbjct: 589 TLDVVHDNVTKVATGEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|168482808|ref|ZP_02707760.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043865|gb|EDT51911.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|15902536|ref|NP_358086.1| valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516342|ref|YP_816000.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81450080|sp|Q8DQU7|SYV_STRR6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15458063|gb|AAK99296.1| Valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076918|gb|ABJ54638.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|149021523|ref|ZP_01835578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930219|gb|EDK81204.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 883

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|116629854|ref|YP_815026.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853954|ref|ZP_04644311.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851633|ref|ZP_06260998.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110508|ref|ZP_07711905.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116095436|gb|ABJ60588.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238833399|gb|EEQ25679.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557601|gb|EFB63198.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065662|gb|EFQ46002.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 879

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 140/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +++L   ++  +     ER    ++     + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D  +   
Sbjct: 411 GHRIPAWYNKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTDNPDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + +     +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNTLVTGYDIIFFWVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N     +  + 
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLAAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           +D     +P    F  +D  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 EDAKPAHMPDTTKFDLADSWIFDRLNHTVSEVTRLFDEYKFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 648 IEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R++G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYANIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGEYIINWDPELQTALSDIEVIHKDD 195


>gi|300361442|ref|ZP_07057619.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354061|gb|EFJ69932.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 901

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 140/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +++L   ++  +     ER    ++     + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLAEEVLKNQKTDGKVNFVPERFEGTLNHWMEDVHDWVISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D  +   
Sbjct: 411 GHRIPAWYNKKTGETYVGEEAPKDIENWEQDPD-VLDTWFSSALWPFSTLGWPDTDNPDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + +     +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNTLVTGYDIIFFWVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+++ G DALR+FL+   A G+D  YD   L    N    N I N     +  + 
Sbjct: 530 VDPMDVVDKYGADALRWFLLNGTAPGQDTRYDPKKLAAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           +D     +P    F  +D  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 EDAKPAHMPDTTQFDLADSWIFDRLNHTVSEVTRLFDEYKFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 648 IEISKV-ALNGDDEELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R++G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMEGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRKQGKDRHQMGREAFVKQVWDWKDEYANIIKGQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +    +   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGEYIINWDPELQTALSDIEVIHKDD 195


>gi|289548809|ref|YP_003473797.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182426|gb|ADC89670.1| valyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 1144

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 112/301 (37%), Gaps = 18/301 (5%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
            R N      +  L+      +   W        + ++  W  +        GY +    
Sbjct: 679 YRYNPSTKKFRFVLRCKRCGSENLRW-------EEDVLDTWFSSALWPFGVWGYPEKTK- 730

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
             ++ +P DL V G DI+ F    +         ++P             KG+K+SK+ G
Sbjct: 731 DLSELYPTDLLVTGFDIIFFWVARMVMMGMHFMKDIPFRDVYIHALVRDEKGQKMSKTKG 790

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVIDP+++IE+ G DALR+ L      G+D    +   +       AN + N     +  
Sbjct: 791 NVIDPLDIIEKYGADALRFTLSILTQQGRDIKLSEKRFEG--YKHFANKLWNAARFVLMN 848

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDR 426
           + +D    +P        D  I ++ +  ++E+ E ++     RA  ++   V     D 
Sbjct: 849 LQEDLLANLPMCAPPRWEDLWITTLLNETVKEVNEALERYDFSRACQKIYDFVWSEFCDW 908

Query: 427 YFDAQKPWELKKTN----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           Y +  K     +           T     + V+  +  LL  F+P +  +++  L  A +
Sbjct: 909 YIEMSKIRLYAEGEDPSVKGEKLTAQATLLRVLDTVLRLLHPFMPFITEELWRHLPTAHK 968

Query: 483 N 483
            
Sbjct: 969 E 969



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           +  ++  +           H+GHA  + + DVL R++R+ G  V++  G D  G      
Sbjct: 30  ESSQRFSVVIPPPNVTGSLHMGHALNVTLQDVLCRWNRMRGKRVVWVPGFDHAGIATQYV 89

Query: 59  -------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        +V  +  + ++    +  S D      T ++   
Sbjct: 90  VDRQLQQEGKSRFQIGREEFLKKVWEWVPISRDSIKNQLIRMGASVDWRRERFTLDEGFS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R  ++K+ ++G IY+G Y   +   D    +D EV    +         P++
Sbjct: 150 RLVRYAFRKLYEEGLIYRGEYIVNWCPSDLTALSDLEVEHEEEDGKLYYIRYPLE 204


>gi|148998241|ref|ZP_01825710.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576529|ref|ZP_02722403.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067188|ref|YP_003876154.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147755884|gb|EDK62928.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577726|gb|EDT98254.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408725|gb|ADM84152.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 883

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNEAGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|237650162|ref|ZP_04524414.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821761|ref|ZP_04597606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 883

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|283769125|ref|ZP_06342030.1| valine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104311|gb|EFC05689.1| valine--tRNA ligase [Bulleidia extructa W1219]
          Length = 871

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 143/366 (39%), Gaps = 36/366 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    E +F ++      +L    + + +      R  +  +     ++D  +SR+   
Sbjct: 352 VEPYLSEQWFVKMKPLAQDVLKTQADENEKMTFYPPRFEKTFNNWLENIEDWCISRQ-LW 410

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+    +   
Sbjct: 411 WGHRIPAWYHKDTKEIYVGQEAPQDIENWRQDEDVLDTWFSSALWPFSTLGWPKETE-DF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P  +   G DI+ F    + + A   +   P    V        KG K+SKSLGN 
Sbjct: 470 KRYYPNSMMGTGYDIIFFWVARMAFQARHFTGQAPFKDVVLHGLIRDAKGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+EVI++ GVDALRYFL      G+D  Y  + ++   N    N I N  SR V M L
Sbjct: 530 IDPMEVIDQYGVDALRYFLTTNSTPGQDLRYIPEKVEAAWN--FINKIWN-ASRFVLMNL 586

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +D         +    D  IL+  ++ ++++  NM       A +++   V +     Y 
Sbjct: 587 EDTTDFRLENKSLNSIDRWILTKLNKTIEQVTLNMDKYEFGLAGSELYGFVWDDFCSWYL 646

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L+  + +  +        V++ +  LL  ++P +  +I+  L + +     Q 
Sbjct: 647 ELAKS-NLRSEHHEIQAATKATLAYVLKAVVCLLHPYMPFVTEEIY--LNLPEHLESIQQ 703

Query: 489 LDQRLK 494
               + 
Sbjct: 704 ESWPIP 709



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I           HIGHA++  I D++AR+ R+ G DVL+  G D  G      
Sbjct: 33  KHKEPFTIVIPPPNVTGILHIGHAFDTTIQDMIARYKRMQGYDVLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++ +   R     L +S D      T ++  +
Sbjct: 93  VEARLKKQGLNRYDLGREKFLERAWAWKEEYAATIRSQWAKLGLSLDYTRERFTMDEGLN 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +  R ++ ++  +G IY+G     +  + +   ++ EV    D      
Sbjct: 153 EAVRKVFVQLYHEGLIYRGKRIINWDPQAKTALSNIEVVYQDDPGKMFY 201


>gi|254423093|ref|ZP_05036811.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190582|gb|EDX85546.1| valyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 1130

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/387 (20%), Positives = 137/387 (35%), Gaps = 59/387 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F ++    ++ L+  +   +     ER  +V       L D  +SR+   
Sbjct: 362 PIEPLISTQWFVKIEPLAEQALAALDQQSDPQFVPERWTKVYRDWLVNLNDWCISRQ-LW 420

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I++  DP  ++  W  
Sbjct: 421 WGHQIPAWYVVTATEDEICDDTPFVVAKNETEAWEKAKAKYGDDIQLKQDPD-VLDTWFS 479

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +    ++T G+ +        ++P    V G DI+ F    +   A   +  +P      
Sbjct: 480 SGLWPMSTLGWPNTSTPDYQFYYPTQTLVTGFDIIFFWVARMTLMAGHFTGKMPFDTVYI 539

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKKRV 350
                    +K+SKS GN IDP+ +I++ G DALRY LVRE+A  G+D   D D      
Sbjct: 540 HGLVRDENNQKMSKSKGNGIDPLVLIDKYGTDALRYTLVREVAGAGQDIRLDYDRQTDES 599

Query: 351 NA-DLANGIGNLVSRSVSMILKDYDGMIP-------TPGAFTESDESILSVCSRVLQEIR 402
           +A + +    N +  +   ++ +  G  P       T G    +DE ILS   +     R
Sbjct: 600 SAVEASRNFTNKLWNASRFVMMNLGGQSPSGLGMPGTAGPLELADEWILSKFHQAAGRSR 659

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +    +  A  ++         D Y +  KP    +    R  T       V+     
Sbjct: 660 TYLDKYGLGEAAKELYDFTRGDFCDWYIELVKPRLYGEGETKR--TAQQTLAYVLEGTLK 717

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQ 487
           LL  F+P +  +++  L    E  C  
Sbjct: 718 LLHPFMPHITEELWHTLTGVGEEDCLA 744



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 18/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +           HIGHA+E  + D + R+ R+ G + L+  GTD     +   
Sbjct: 43  KGGEPFCVMIPPPNVTGSLHIGHAFEQALIDTVVRYQRMKGKNTLYLPGTDHASIAVQTI 102

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  Q+          L IS D      T ++   
Sbjct: 103 LEEQFADEGQTRESVGREKFLERAWEWKAQSGGTIVGQLTKLGISADWSRERFTMDEGLS 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                 + ++ ++G IY+G Y   +    ++  +D EV K            P+   E E
Sbjct: 163 TAVLTAFNQLYEEGLIYRGSYMVNWCPASQSAVSDLEVEKKEVDGKLWHFRYPLVGEEGE 222


>gi|157364834|ref|YP_001471601.1| valyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166987328|sp|A8F8Q3|SYV_THELT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157315438|gb|ABV34537.1| valyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 861

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 138/375 (36%), Gaps = 44/375 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +     + ++    + +F  + +   + +   E+     +P  R  +V       ++D  
Sbjct: 341 HCYRCDSVIEPRIMDQWFVSMKSLSKRAIEAVENEEIRFVPE-RWKKVYLHWMYNIRDWC 399

Query: 209 LSRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTT 241
           +SR+ +                             G K  +  + ++  W  +     +T
Sbjct: 400 ISRQLWWGHRVPVWYCKNCNETIVSEIDIEECPKCGSKSIEQDEDVLDTWFSSALWPFST 459

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +  +    K++P  + V G DI+ F    +    +      P              
Sbjct: 460 LGWPEKTE-DLEKYYPTSVLVTGFDIIFFWVARMIIMGYQFMQKKPFTDVYIHQLIRDKH 518

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDPI++ E+ G D +R+ L    A G D   D+         D      
Sbjct: 519 GRKMSKSLGNGIDPIDMSEKYGTDPVRFTLAIFAAQGSDIKLDERYF------DTYRKFA 572

Query: 360 NLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           N +  +   +L + D   P P    + +D  ILS   +V+  + + ++    + A   + 
Sbjct: 573 NKIWNAARFVLINLDNYKPQPLNELSLADRWILSKLQKVISVVSDAIEKYEFNIAARSLY 632

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y ++ K   L   N ++ +    V V+V+     LL  F+P L+ +++  
Sbjct: 633 EFFWNEFCDWYIESSK-LVL---NSEKKAITQNVLVKVLDTSLRLLHPFMPFLSEELWQN 688

Query: 477 LFVADENRCFQSLDQ 491
           L V  E+       +
Sbjct: 689 LPVHGESIVISDWPE 703



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I         + H+GHA  + + D+L R+ R+ G D L+  G D  G     A +  
Sbjct: 34  PFVIVIPPPNITGRIHMGHALNITLQDILVRYKRMRGFDTLWVPGEDHAGIATQNAVERY 93

Query: 66  GVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
             +                   +  +  +  R   + L  S D      T +       R
Sbjct: 94  LESQGKSREQLGREKFIEIVWEWAKKYRKEIRQQIETLGASVDWSRERFTLDDGLSKAVR 153

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++  + ++G IY+G Y   +  R +   +D+EV    +
Sbjct: 154 KVFVDLYNRGLIYRGKYMVNWCPRCQTVLSDEEVEHIEE 192


>gi|225860574|ref|YP_002742083.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229933|ref|ZP_06963614.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255643|ref|ZP_06979229.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502363|ref|YP_003724303.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|225728073|gb|ACO23924.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237958|gb|ADI69089.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390309|gb|EGE88650.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 883

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 131/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-- 371
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 372 ------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                 D    + T  A   +D  IL   +  + +   N        A   + + + E  
Sbjct: 589 TLDVVHDNVTKVATGEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL   +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|315928497|gb|EFV07803.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 399

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 94/267 (35%), Positives = 148/267 (55%), Gaps = 6/267 (2%)

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
               G  AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+SK
Sbjct: 9   FQNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSK 68

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R 
Sbjct: 69  SKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRI 128

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  +
Sbjct: 129 IGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVAN 187

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                 +PW L K N  ++A+ ++ +   ++ + ++LL   +PK + K+   L     + 
Sbjct: 188 LAISKYEPWSLIKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKVALALNFEISSA 247

Query: 485 CFQS--LDQRLKPGFMLHKTFDPIFPR 509
            +    LD  L          + +FP+
Sbjct: 248 NYTKMILDNELL--DFKANPCEALFPK 272


>gi|149002240|ref|ZP_01827182.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759555|gb|EDK66546.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 883

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 134/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|110289055|gb|ABG66070.1| methionyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 471

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/436 (19%), Positives = 165/436 (37%), Gaps = 33/436 (7%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                      L +              G    +     N  E+             +  
Sbjct: 6   CNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVN----PKCKVCGSTP 61

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
              + +  F  L   ++KL  Y +             +   +++K GLK   ++R    W
Sbjct: 62  CVRDTDHLFLELPLLREKLEKYIDETSLTGSWSQNAIHATNAWLKEGLKPRCITRD-LKW 120

Query: 217 GIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFH 271
           G+ +P +     + YVW DA   Y++ T     P+  K    P ++     +GKD + FH
Sbjct: 121 GVPVPHEKYKDKVFYVWFDAPIGYISITA-CYTPEWEKWWKNPENVELYQFMGKDNVPFH 179

Query: 272 AIYWPAFLLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVI-EEVGVDALRYF 328
            + +P+ LL         K +    ++ ++  K SK+ G  +   +     +  +  RY+
Sbjct: 180 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPEVWRYY 239

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAFT 384
           L+       D  +    L+ + N +L N +GN ++R +S I K     Y  ++P      
Sbjct: 240 LLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVVPDSPDVD 299

Query: 385 --ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
                +S+     +++ +  + M    I + L   +++ SE + Y    + W+L K +P 
Sbjct: 300 SHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWKLYKQDPA 359

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCF----------QSLDQ 491
             +TV+  +V ++  LA LL+ F+P  +  +   L +  +E+  F          +    
Sbjct: 360 SCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCDEKGEVEKAKRPWD 419

Query: 492 RLKPGFMLHKTFDPIF 507
            +  G  + K   P+F
Sbjct: 420 LIPSGHRIGKPA-PLF 434


>gi|329667571|gb|AEB93519.1| valyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 879

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/347 (20%), Positives = 136/347 (39%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +K+L   ++  +     ER    +    S + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDENSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNTLVTGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V++E G DALR+FL+   A G+D  YD   +    N    N I N     +  + 
Sbjct: 530 VDPMDVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           +D     +P    F  +D  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 EDAQPAHMPDTSKFDLADSWIFDRLNHTVSEVTRLFDEYQFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L   + +  +      + ++ Q+  LL   +P +  K++
Sbjct: 648 IEISKV-ALNGDDEELKTRKQENLIWILDQILRLLHPIMPFVTEKLW 693



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    T                   + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRTQGKDRHEMGREAFVKQVWDWKDEYAAIIKSQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDD 195


>gi|257457527|ref|ZP_05622694.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444913|gb|EEV19989.1| valyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 900

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 143/384 (37%), Gaps = 42/384 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    HN V+    E +F ++    +K L+ ++       P +  N   S     ++D  
Sbjct: 358 HCYRCHNVVEPYLSEQWFVKMHPLAEKALAAWKKGELVFYPQKWENT-YSHWMENIRDWC 416

Query: 209 LSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDALTNYLT 240
           +SR+   WG  I +                                ++  W  +     +
Sbjct: 417 ISRQ-LWWGHRIPVWYCQDCGKMTVSVEDVTECPHCKSTALKQDNDVLDTWFSSWLWPFS 475

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +  +    +++P    + G DI+ F    +   A   +  +P             
Sbjct: 476 TLGWPEKTE-DFKRYYPTSAVITGHDIIFFWVSRMIMAALEFTGTVPFRDIYLHGLVRDK 534

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+ +I+E G DAL++ L      G+D   D +  K  + +  AN I
Sbjct: 535 QGRKMSKSLGNGIDPLNIIDEYGADALKFTLTFMCTQGQDILIDNESFK--LGSRFANKI 592

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR +   L+    +  +    TE D  I    +  ++ +R   +    +     V 
Sbjct: 593 WN-ASRYILGNLEGRRIVSVSSSELTELDRWIYHTLNETVKNVRAAFEGYRYNEVGQSVY 651

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    K  +    + +  V + V+ +   LL   +P +  +I+  
Sbjct: 652 EFFWNNFCDWYVEGTK-LSYKNGDEAEKNRITSVLLAVLEESLRLLHPVLPFVTEEIYRK 710

Query: 477 LF---VADENRCFQSLDQRLKPGF 497
           L    VA  +R  ++L     P +
Sbjct: 711 LPENCVAGASRRAEALITADYPAY 734



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  ++          HIGH    ++ DV+ R+HR+ G + L+  GTD  G       +  
Sbjct: 44  RYVVAIPPPNVTGVLHIGHGLNNVLQDVVIRYHRMKGDETLWLPGTDHAGIATQNVVERQ 103

Query: 66  GVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                              T    +++     +    +  S D      T ++      R
Sbjct: 104 LKAEGKTRHDLGREAFLKRTWEVKEKHHAIITNQLRKIGASVDWSRERFTMDEGLSHAVR 163

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  + ++G IY+G Y   +         DDEV  
Sbjct: 164 TVFVSLYERGLIYRGNYLVNWCPSCGTALADDEVDH 199


>gi|307704026|ref|ZP_07640958.1| valyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622417|gb|EFO01422.1| valyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 883

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEIYVGEEAPEGEGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 472 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDSSWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + +   N        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|169334634|ref|ZP_02861827.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259351|gb|EDS73317.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
          Length = 882

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 149/399 (37%), Gaps = 38/399 (9%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G   K          +E    +       +       H  V+ +    +F ++      
Sbjct: 315 QGLTTKQARKEIVKDLEELGLLEKIEDHMHNVGTCYRCHATVEPLTSLQWFVKMEPLAKP 374

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------------- 215
            +          +P  R  ++       +KD  +SR+ +                     
Sbjct: 375 AIDAVNEKEVNFVPD-RFKKIYFNWMENIKDWCISRQLWWGHRIPAYYCEECGEMVVSKE 433

Query: 216 -------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                   G       +  +  W  +     +T G+    +  K KF+P D+ V G DI+
Sbjct: 434 MPAKCEKCGCTSFKQDEDALDTWFSSALWPFSTLGWPKETEDLK-KFYPNDVLVTGFDII 492

Query: 269 RFHAIYWPAFLL-SANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALR 326
            F         +     P    V+ HG +   +G K+SKSLGN IDP+EVI++ G D LR
Sbjct: 493 FFWVARMVFSGIEQMGEPPFHHVYIHGLVRDSQGRKMSKSLGNGIDPLEVIDKYGADVLR 552

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTE 385
           + LV     G D  + +  ++   N + AN I N  +R + M L+D+D            
Sbjct: 553 FSLVTGNKAGNDTRWQESKVEA--NRNFANKINN-AARFILMNLEDFDENKKADLPKLHN 609

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDR 443
           +D+ I+S  +++++E+  N++      A  ++ + +     D Y +  KP  L   N + 
Sbjct: 610 TDKWIISRTNQMVKEVTANIEKYEFGIAAEKLYTFIWNEFCDLYIEFAKP-SLNSDNKED 668

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                Y    V   +  +L  ++P +   I+  +   ++
Sbjct: 669 RFNTQYTLNLVFMNILKMLHPYMPFITEHIYSFMPGRED 707



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 23/182 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + HIGHA++  + D+L R+ R+ G   L+  G D         
Sbjct: 36  KDGKPFTIIMPPPNITGKLHIGHAFDDTLQDILIRYKRMKGYAALWVPGEDHASIATEVK 95

Query: 62  A---------------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                 + A    K +  + +   R +    D S + F  T ++
Sbjct: 96  VVDKIKEETGKTKQDLGREKFLKEAWNWAKTYRKEIANQVRKLGSSCDWSRERF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
              +  +  + ++  KG IY+G     +    +   +D EV       +      P++  
Sbjct: 154 GVSEAVKETFIRLYKKGLIYRGNRIINWCPSCKTALSDAEVEYEEQAGHLWHIKYPIKDS 213

Query: 161 EE 162
           +E
Sbjct: 214 DE 215


>gi|223984583|ref|ZP_03634710.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
 gi|223963430|gb|EEF67815.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
          Length = 889

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 145/366 (39%), Gaps = 33/366 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+ M  + +F R+    + +L + E +  +      R  +  +     ++D  +SR+   
Sbjct: 371 VEPMLSKQWFVRMKPLAEDVLKHQELAEEKINFYPPRFEKTFTQWLENIEDWCISRQ-LW 429

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                        +  + ++  W  +     +T G+ D      
Sbjct: 430 WGHRIPAWYHKETGEIYVGTEAPQDLENWNQDEDVLDTWFSSALWPFSTLGWPDKTP-DL 488

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + + A   + + P    +        +G K+SKSLGN 
Sbjct: 489 ERYYPNDVLVTGYDIIFFWVARMAFQARYFTKSRPFKDVLIHGLIRDAQGRKMSKSLGNG 548

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI + GVD+LR+FL      G+D  Y ++ L+   N    N I N     +  + 
Sbjct: 549 VDPMDVIAKHGVDSLRFFLTTNSTPGQDMRYIEEKLEASWN--FINKIWNASRFVMMNMP 606

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +D+          + +D  IL+  +  +  +  NM          ++ S + +     Y 
Sbjct: 607 EDFTLEDIDLSTLSITDTWILNRLNETIASVTANMDKYEFALVGNELYSFIWDDFCSWYI 666

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +           +  +R +  LL  F+P +  +I+ +L   ++  C  +
Sbjct: 667 ELSKA-GLNSEDAQVKRATQSTLIVCLRAIIRLLHPFMPFVTEEIYSVLPHTEKACCLAA 725

Query: 489 LDQRLK 494
               ++
Sbjct: 726 WPTPVE 731



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 19/176 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I         + H+GHA++  + D++AR+ R+ G D+L+  G D  G      
Sbjct: 52  QSKDPFCIVIPPPNVTGKLHLGHAWDTTLQDIIARYKRMQGYDMLWVPGMDHAGIATQAK 111

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     + ++ + + R     + +S D      T ++   
Sbjct: 112 VDERLKKEGVSRYDLGREKFLERAWDWKEEYAGHIRQQWAKMGLSLDYTRERFTLDEGLS 171

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++    + G IY+G     W      A  N + ++K  +G  Y   +  V+
Sbjct: 172 KAVAKVFVDYYNDGLIYQGERIINWDPAAKTALSNIEVIHKETEGAMYTFNYKVVE 227


>gi|289422687|ref|ZP_06424527.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156866|gb|EFD05491.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 883

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/369 (20%), Positives = 144/369 (39%), Gaps = 44/369 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
               H  ++      +F ++       +   ++     +P +     + +++  ++D  +
Sbjct: 346 CYRCHTTIEPRLSLQWFVKMDELAKPAIEILKNKELKFVPEKFDKTYLQWLE-NIRDWCV 404

Query: 210 SRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTT 241
           SR+   WG +IP                               + ++  W  +      T
Sbjct: 405 SRQ-LWWGHQIPAYYCQDCGELIVAEEAPHECPKCHSNNIKQDEDVLDTWFSSGLWPFET 463

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +  +     ++P  + V G DI+ F    + + +     + P    +        +
Sbjct: 464 LGWPEKSE-ELDYYFPTSVLVTGYDIIFFWVVRMAFSSMFCMNDKPFEHVLIHGLVRDSE 522

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGN IDP+E+I++ G DALR+ L+   + G D  +  + ++     +  N + 
Sbjct: 523 GRKMSKSLGNGIDPLEIIDQFGADALRFTLITGNSPGNDMRFYMERVE--FARNFNNKLW 580

Query: 360 NLVSRSVSMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N  SR V M L+D                T +D+ I+S  +R++ E+  NM    +  AL
Sbjct: 581 N-ASRFVFMNLEDESLLDGLTREAVEKDLTLADKWIISRANRIVDEVNTNMDKFELGIAL 639

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +          D Y +  KP  L   + D     LY    V+ ++  LL  F+P +  +
Sbjct: 640 QKSYEFTWSEYCDWYIEIVKP-RLYGDDRDAKRAALYTLTYVLEKILKLLHPFIPFITEE 698

Query: 473 IFDILFVAD 481
           I+  L   +
Sbjct: 699 IYSYLPTVE 707



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 23/182 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   I         Q H+GHA +  + D L R+ R+DG + L+  GTD         
Sbjct: 33  KDKKPFTIVMPPPNITGQLHMGHALDDTLQDTLIRWKRMDGFESLWIPGTDHASIATEVK 92

Query: 62  AQ--------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                       K  F  +     + +    D   + F  T ++
Sbjct: 93  VVDRIKKETGKSKYEFGRQEFLKEAWKWKDEFGGKIVNQVKKLGASCDWDRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             +      + K+ ++G IY+G     +    +   +D EV        +     P++  
Sbjct: 151 GCNRAVTKFFVKLYEEGHIYRGNRIINWCPSCKTTLSDAEVEHEDQEGNFWHIKYPIKDS 210

Query: 161 EE 162
           +E
Sbjct: 211 DE 212


>gi|312880132|ref|ZP_07739932.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783423|gb|EFQ23821.1| valyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 888

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 80/385 (20%), Positives = 137/385 (35%), Gaps = 39/385 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V       +       V+    E +F R     D  +          +P    N    ++
Sbjct: 342 VEHRHSVGHCYRCQTLVEPYLSEQWFVRAKPLADAGVKAVREGRIRWVPENWVNVYYQWM 401

Query: 201 KSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWI 232
           +  ++D  +SR+   WG +IP                               + ++  W 
Sbjct: 402 E-NIRDWCISRQ-LWWGHRIPAWYCEDCGAVMVEETPPQRCEKCDSSRLRQDEDVLDTWF 459

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVF 291
            +     +T G+ +      A+F+P  L   G DI+ F         L     +P + V+
Sbjct: 460 SSALWPFSTMGWPEKTP-ELARFYPTGLLTTGFDIIFFWVARMVMMGLEFMEEVPFRNVY 518

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            H  +   KG+K+SKS GNVIDP++VI+  G DALR  L      G+D +   + ++   
Sbjct: 519 IHALVRDEKGQKMSKSKGNVIDPLDVIDRFGADALRLTLASLTVQGRDIYLSTNKIES-- 576

Query: 351 NADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                N + N  SR   + L+  D             D  IL+    V++E+   ++   
Sbjct: 577 YRFFLNKLWN-ASRFALLNLEGTDPNGTFREEDLRLHDRWILTRRGEVIEEMGRLLEGYF 635

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              A   +   V     D Y +  KP         R +    V + V R + +LL  FVP
Sbjct: 636 FGEAARLMYDFVWTELCDWYLELSKPALRGDEGESRKAATQGVLLSVFRDVLLLLHPFVP 695

Query: 468 KLANKIFDILFVADENRCFQSLDQR 492
            +  +++       E    Q   + 
Sbjct: 696 FVTEELWRSFPFDQEFLIRQPWPEA 720



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA    + D + R+ R+ G +VL+  GTD  G       +
Sbjct: 39  KPPFSIVIPPPNVTGSLHMGHALNNTLQDAICRYKRMKGFEVLWLPGTDHAGIATQNVVE 98

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
            +  T                   + +Q           L  S  +D    T ++     
Sbjct: 99  RSLATQGVSRHDLGREAFVEKVWEWKEQYGSRIISQLKKLGASCDWDRERFTMDEGLSQA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            R ++ ++  K  IY+G Y   +  R     +D EV   
Sbjct: 159 VRQVFVELYRKDLIYRGKYLINWCPRCRTALSDLEVEHH 197


>gi|302037068|ref|YP_003797390.1| valyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605132|emb|CBK41465.1| Valyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 920

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 137/382 (35%), Gaps = 65/382 (17%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+    + +F ++    +  +   E     I+P   +N  + +++  +KD  +
Sbjct: 357 CYRCKTVVEPFLSDQWFVKIKPLAEPAIQAVEDGRVRIIPEAWKNNYLGWMRD-IKDWCI 415

Query: 210 SRKTFDWGIKIP------------------------------------------------ 221
           SR+   WG +IP                                                
Sbjct: 416 SRQ-IWWGHQIPAWYCETCYGSPFLRRSSDGAPLIPSDAAVIVAKTKPATCPKGHSGALV 474

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     +T G+       K  F+P    V G DIL F    +      
Sbjct: 475 QDPD-VLDTWFSSALWPFSTLGWPKQTADLKT-FYPTSTLVTGLDILFFWVARMIMMGLK 532

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               +P             +G+K+SKS GNVIDP+ V+E+ G DALR+ +    + G+D 
Sbjct: 533 FMGEVPFRDVYIHALVRDAEGQKMSKSKGNVIDPLHVMEQFGTDALRFTMAAMASPGRDV 592

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRV 397
              ++ ++   N        N +  +   +L   DG      A   +  D  ILS  +  
Sbjct: 593 KLAEERIEGYRN------FTNKIWNAARFLLMHLDGERAEVPAAQRSFPDRWILSRLNAA 646

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +  +   ++     RA + +   +     D+Y +  KP  LK    ++A T      E  
Sbjct: 647 ISTVTHELEQYRFDRASSAIYQFIWHEYCDKYIEMIKP-ALKDQASEQAKTTRQTLAETF 705

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  LL  F+P ++ +I+  L
Sbjct: 706 ETMMRLLHPFMPFISEEIWQTL 727



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 18/150 (12%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT-- 69
                    H+GHA    + D+L R+ R+ G +VL+  GTD  G       +        
Sbjct: 45  PPPNVTGSLHVGHALNNTLQDILIRWRRMQGRNVLWMPGTDHAGIATQNVVERQLQAEGT 104

Query: 70  --------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKI 113
                           + +++          L  S D      T ++   +  R ++ ++
Sbjct: 105 TREALGREEFLKRVWQWKEKSGGTIISQLKRLGASCDWERERFTMDEGLSEAVREVFVRL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              G +Y+G     +  R     +D EV  
Sbjct: 165 HADGLLYRGERLINWCPRCLTALSDIEVEH 194


>gi|218675110|ref|ZP_03524779.1| putative methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 348

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 32/345 (9%)

Query: 186 FILPIERRNEVISFVKSGLKDLSLSRKTFD---WGIKIP----DDPQYIMYVWIDALTNY 238
            I+P  RRNE+++ V+ GL D+S+SR       WG+ +P     D   ++YVW DAL NY
Sbjct: 9   RIVPAHRRNEMLALVRRGLTDISVSRSAERARGWGVPVPDGGGPDADDVVYVWFDALANY 68

Query: 239 LTTTGYLDNPDGSKAKFWP--ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
           LT  G   +      ++W     +H++GK I +FHAIYWPA LLSA LP P  +  HG++
Sbjct: 69  LTGLG-HGSDQTLLQRYWNGGERIHIVGKGISKFHAIYWPAILLSAGLPPPSSILVHGYV 127

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVG-VDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              G KI KS GN IDP  +I+  G  DALRY+L+R I  G DG +  + L+   + +LA
Sbjct: 128 TVDGRKIGKSAGNGIDPESIIDAYGTPDALRYYLLRHIRSGDDGDFSGERLEAAWSGELA 187

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             +GNL +R ++++ + + G++P            +    R+  ++        +H  LA
Sbjct: 188 GQLGNLANRVLALLYQSFGGIVPPVPE-----NEFVLEAHRLPGKVARAFDTYELHVGLA 242

Query: 416 QVISLVSEVDRYFDAQKPWELKKT------NPDRASTVLYVT------VEVIRQLAILLQ 463
            +   V E +R F    PW   KT      + DR +T   +       +  +  +A  L 
Sbjct: 243 DIFEFVGEANRRFTKGAPWADAKTLLADPASEDRKATTERLGACLAEQIYGLATVARCLL 302

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            F+P  A  +   L +    R ++  D  +  G         +FP
Sbjct: 303 PFLPGSAATLHSRLGIPS-PRLYR--DPLIVAGVK-AAPQAVLFP 343


>gi|269926588|ref|YP_003323211.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790248|gb|ACZ42389.1| valyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 891

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/383 (18%), Positives = 145/383 (37%), Gaps = 46/383 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + ++ +  E +F R+       L    +    ++P   +   I++V++   D  +
Sbjct: 349 CDRCESVIEPIISEQWFLRMDRLNKPALEVVRNEIVRMIPDRFKQIYINWVENE-HDWCI 407

Query: 210 SRKTFDWGIKI----PDDPQY-------------------------IMYVWIDALTNYLT 240
           SR+   WG +I      D  +                         ++  W  +    ++
Sbjct: 408 SRQ-LWWGHRIPIWYCHDCGHTMATDQEMLERCEKCGSTHIEQDPDVLDTWFSSALWPMS 466

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ ++ D  +  F+P  +   G DI+    H + +        +P     F       
Sbjct: 467 TLGWPEDTDDLR-YFYPTSVMETGYDIIFLWVHRMIFMGLHFMGEVPFFDVYFHGTVRDE 525

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG+++SK+ GNV+DP E+ E+ G DALR+ L+     G D       ++   N   AN I
Sbjct: 526 KGQRMSKTKGNVLDPTEITEQYGSDALRFALITSAPAGSDMKLGIQRVEAMRN--FANKI 583

Query: 359 GNLVSRSVSMILK-------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            N     +            D D +  +    T +D+ I+S   R ++++   M+   +H
Sbjct: 584 WNATRYVIRACEDSQIETGPDGDPLPTSSEDATLADKWIISRLHRTIRDVTNMMERYQLH 643

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A  ++   +     D Y ++ K   L   N           V V+ +   LL  ++P +
Sbjct: 644 EAGRRLYDFIWSEYCDWYIESTKV-VLAGDNEPAKRAARQTLVYVLERALRLLHPYMPFV 702

Query: 470 ANKIFDILFVADENRCFQSLDQR 492
             +++  L    E+    +  + 
Sbjct: 703 TEELWHYLPHKGESIMIANWPEG 725



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I         + H+GHA  + + D+L R+ R+ G   L+  G D  G       
Sbjct: 38  TRKPFTIIMPPPNVTGELHMGHALFVTVEDILTRWRRMQGYPTLWLPGADHAGIAGQWVV 97

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     T  ++++     R+   +L  S D   F  T +     
Sbjct: 98  EKELAAEGLTRHDLGREKFLERTWDWMNRYRGRIREQLRILGASCDWSRFKFTMDPEPSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R  +K++ D+G IY+G     +  R     +D EV       +      P+   ++
Sbjct: 158 AVRTAFKRLYDEGLIYRGKRMINWCPRCMTALSDLEVDHEEVKSHLWTLRYPIDGTDQ 215


>gi|257463901|ref|ZP_05628287.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061430|ref|ZP_07925915.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687106|gb|EFS23941.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 887

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 144/376 (38%), Gaps = 11/376 (2%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + +   + G  Y+        +  + +     + + A     N Q   +    E+ Y+ 
Sbjct: 334 KIEELNHNVGQCYRCSTVVEPRVSKQWFVKTKPLAEKAIDVVRNGQVKIMPKRMEKIYYS 393

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
            +   +D  +S        I      +E I       + LS ++  +   +++  +   +
Sbjct: 394 WMENIRDWCISRQLWWGHRIPAWYGPDEHIFVAMDETEALSQAKLHYGKEVELRQEED-V 452

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +        ++P    V G DI+ F    +         ++P
Sbjct: 453 LDTWFSSALWPFSTMGWPEKTK-ELELYYPTSTLVTGADIIFFWVARMIMFGLYEMKDIP 511

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                F        G K+SKSLGN  DP+++IE+ G DA+R+ ++   + G+D  + +  
Sbjct: 512 FRNVFFHGIVRDDLGRKMSKSLGNSPDPLDLIEQYGADAIRFSMIYNTSQGQDVRFSEKL 571

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRE 403
           L+  +  + AN I N  SR V M L+D+D          +   DE ILS      + +  
Sbjct: 572 LE--MGRNFANKIWN-ASRFVMMNLEDFDINTFDEKEVKYELVDEWILSRLQETAKAVET 628

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            + N  +  A   V   +     D Y +  K       +     T  YV   ++     L
Sbjct: 629 RLSNFQLDEAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLWSMLEAGLRL 688

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P ++ +I+  +
Sbjct: 689 LHPFMPYISEEIWQSI 704



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GH     I D L R+ R+ G + L+  G D  G      
Sbjct: 33  EGKENYSIVIPPPNVTGILHMGHVLNNSIQDTLVRYQRMTGKNTLWLPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + +++          L  S  +D    T ++   
Sbjct: 93  VERKLKEEGLTKEDLGREEFLRRTWEWKEEHGGIITTQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 HAVRKIFVDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEESHGHLWHLKYPVKNSDE 211


>gi|42518883|ref|NP_964813.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81667980|sp|Q74JZ8|SYV_LACJO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41583169|gb|AAS08779.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 879

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/347 (20%), Positives = 136/347 (39%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +K+L   ++  +     ER    +    S + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGETYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDENSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNTLVTGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V++E G DALR+FL+   A G+D  YD   +    N    N I N     +  + 
Sbjct: 530 VDPMDVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           +D     +P    F  +D  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 EDAKPAHMPDTSKFDLADSWIFDRLNHTVSEVTRLFDEYQFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L   + +  +      + ++ Q+  LL   +P +  K++
Sbjct: 648 IEISKV-ALNGDDEELKTRKQENLIWILDQILRLLHPIMPFVTEKLW 693



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    T                   + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRTQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDD 195


>gi|157151226|ref|YP_001449942.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076020|gb|ABV10703.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 882

 Score =  188 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 410

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 411 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 471 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 531 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 587

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 588 TLEQATANVEKVVNKEAGNVTDCWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 647

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 648 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 700



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 33  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 93  VEERLRGEGISRYDLGREKFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 153 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 192


>gi|145596005|ref|YP_001160302.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305342|gb|ABP55924.1| valyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 872

 Score =  188 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 131/376 (34%), Gaps = 39/376 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F   S                I P E   +        + D  
Sbjct: 350 HCSRCRTSVEPRLSLQWFINTSPLAKAAGDAVRDGRVRIEPAE-LAKRYFAWVDNMHDWC 408

Query: 209 LSRKTFDWG--IKIPDDP----------------------QYIMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                      + ++  W  +     +T G+
Sbjct: 409 ISRQ-LWWGHRIPVWYGPAGEVVCVGPDETPPAGAGWRQDEDVLDTWFSSGLWPFSTLGW 467

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 468 PEQTP-ELAKFYPTSVLVTGYDILFFWVARMMMFGLYAMDGRQPFDVVALHGMVRDEHGK 526

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+  I+  G DA R+ L R    G D    ++  +   N    N + N 
Sbjct: 527 KMSKSFGNVIDPLNWIDRFGADATRFTLTRGANPGGDVAVSEEWCQGSRN--FCNKLWN- 583

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   +      G +P+       D  +LS  +RV  E  E  +     +A   +    
Sbjct: 584 ATRFALLNGAHTQGALPSATELAPVDRWVLSRLARVTAEAEEQFEAYEFAKACDLLYHFA 643

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-- 477
            +   D Y +  KP  L    P  A T   V   V+ QL  LL   +P + ++++  L  
Sbjct: 644 WDEVCDWYVELTKP-LLAAGGPA-ADTTRRVLGHVLDQLLRLLHPVIPFVTDELWIALTG 701

Query: 478 FVADENRCFQSLDQRL 493
                   + + D+ L
Sbjct: 702 GQTIMTAAWPAADRAL 717



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
            ++    I           H+GHA +  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPYTIVIPPPNVTGSLHMGHALDHTMQDALVRRKRMQGYEALWVPGMDHAGIATQNV 103

Query: 59  ------AKAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
                  +      +  + FV++                R + D +D   + F  T +  
Sbjct: 104 VERQLGEQGLSRHDLGREAFVERVWEWKAESGGAILGQMRRLGDSVDWERERF--TMDAG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K + D G IY+      +  R     +D EV    D
Sbjct: 162 LSRAVQTMFKALYDDGLIYRAERIINWCPRCLTALSDIEVEHTDD 206


>gi|125718618|ref|YP_001035751.1| valyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498535|gb|ABN45201.1| Valyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 890

 Score =  188 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 129/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++   +  +      R N+        + D  +SR+   W
Sbjct: 361 VEPRLSTQWFVKMDQLAKNAIANQATDDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 419

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 420 GHQIPAWYNAEGEIYVGEEAPECDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 479

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + +     +   P    +        +G K+SKSLGN IDP
Sbjct: 480 YPTSTLVTGYDIIPFWVSRMIFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDP 539

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++V+++ G D+LR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 540 MDVVDKYGTDSLRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 596

Query: 374 DGMIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                           A   +D  IL   +  + ++ EN        A   + + + +  
Sbjct: 597 TLDAARENVAQVTAGQAGNVTDRWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEF 656

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N D       V +  + Q+  LL   +P +  +IF  +
Sbjct: 657 ADWYVELTK-EVLYSDNDDEKVITRSVLLYTLDQILRLLYPIMPFVTEEIFGQI 709



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 42  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 101

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 102 VEERLREQGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 161

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  KG IY+G +   +        +D EV  
Sbjct: 162 KAVRKVFVELYKKGWIYRGEFIINWDPAARTALSDIEVIH 201


>gi|268319720|ref|YP_003293376.1| hypothetical protein FI9785_1249 [Lactobacillus johnsonii FI9785]
 gi|262398095|emb|CAX67109.1| valS [Lactobacillus johnsonii FI9785]
          Length = 879

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 72/347 (20%), Positives = 136/347 (39%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +K+L   ++  +     ER    +    S + D  +SR+   W
Sbjct: 352 VEPRLSKQWFVKMKPLAEKVLENQKTDDKVNFVPERFEHTLEQWMSDVHDWVISRQ-LWW 410

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 411 GHRIPAWYNKKTGEIYVGLEAPKDSENWEQDPD-VLDTWFSSALWPFSTLGWPDEDSEDF 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 470 KRYFPTNTLVTGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDPQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V++E G DALR+FL+   A G+D  YD   +    N    N I N     +  + 
Sbjct: 530 VDPMDVVDEYGADALRWFLLNGTAPGQDTRYDPKKMGAAWN--FINKIWNASRFVIMNLP 587

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
           +D     +P    F  +D  I    +  + E+           A  ++ + +     D Y
Sbjct: 588 EDAKPAHMPDTSKFDLADSWIFDRLNHTVSEVTRLFDEYQFGEAGRELYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L   + +  +      + ++ Q+  LL   +P +  K++
Sbjct: 648 IEISKV-ALNGDDEELKTRKQENLIWILDQILRLLHPIMPFVTEKLW 693



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    T                   + D+ +   +     + +S D      T +K   
Sbjct: 93  VEAKLRTQGKDRHEMGREAFVKQVWDWKDEYASIIKSQWAKMGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 153 KAVRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDD 195


>gi|168333858|ref|ZP_02692101.1| valyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 877

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 80/387 (20%), Positives = 151/387 (39%), Gaps = 38/387 (9%)

Query: 139 DEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D++         + + N V + M +E +F ++ A  +  +   +S     +P  R  +  
Sbjct: 331 DKIEPHVHNVGIHDRCNCVIEPMIKEQWFVKMKAMAEPAIEALKSGELNFVPE-RFGKTY 389

Query: 198 SFVKSGLKDLSLSRKTFD--------------------------WGIKIPDDPQYIMYVW 231
                 ++D  +SR+ +                            G       +  +  W
Sbjct: 390 LRWLENIRDWXISRQLWWGHRIPAYYCQKCGEVIVSSTKPSQCKCGHTEFVQDKDTLDTW 449

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
             +     +T G+ +      A F+P  + V G DI+ F    + +        +P    
Sbjct: 450 FSSALWPFSTLGWPETTA-ELAHFYPTSVLVTGYDIIFFWVVRMVFSGIEQMGEVPFKDV 508

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +        +G K+SKSLGN IDP++VI++ G DALR  LV   A G D  +  + ++  
Sbjct: 509 LIHGLIRDSEGRKMSKSLGNGIDPLDVIKQYGADALRLTLVTGNAPGNDMRFYFERVEG- 567

Query: 350 VNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            N +  N + N  +R + M  ++ D  +   P   T +D+ ILS  + +   + EN+   
Sbjct: 568 -NRNFLNKLWN-ATRFILMNCENEDIDLCTMPKNLTTTDKWILSKANNLTTIVTENLDKY 625

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            +  A+ +V     E   D Y +  KP      +  R + + Y    V+  +  +L  F+
Sbjct: 626 ELGMAVGKVYDFAWEEFCDWYIEMVKPRLYDNDDLTRPAAL-YTLKTVMIDILKMLHPFI 684

Query: 467 PKLANKIFDILFVADENRCFQSLDQRL 493
           P +  +IF  L   + +    S    +
Sbjct: 685 PFVTEEIFMGLQNTENSIMISSWPTFI 711



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 60/175 (34%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         Q H+GHA +  + D+L R+ R+ G + L+  GTD         
Sbjct: 31  KSKKPFTIMMPPPNITGQLHMGHALDNTLQDILTRYKRMXGYNTLWMPGTDHASIATEVK 90

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
             N                       + D+           L  S  +D    T +    
Sbjct: 91  IVNKLKEEGIDKNDLGRDEFLKRAWQWKDEYGGLITQQLRKLGSSCDWDRERFTMDAGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPV 157
                ++ K+ +KG IYKG     +    +   +D EV     +G +Y+  +  V
Sbjct: 151 AAVEAVFIKLYEKGYIYKGSRIINWCPVCKTSISDAEVIHEEREGNFYHLNYKIV 205


>gi|229118537|ref|ZP_04247890.1| Methionine--tRNA ligase [Bacillus cereus Rock1-3]
 gi|228664918|gb|EEL20407.1| Methionine--tRNA ligase [Bacillus cereus Rock1-3]
          Length = 671

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 85/533 (15%), Positives = 191/533 (35%), Gaps = 36/533 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K  I+     PN   H+GH       AD+L R+ +L G +VL+ +G D+H   +  
Sbjct: 121 SGKKKYLITATPPTPNGDLHVGHLSGPYTGADILTRYLKLKGNEVLYMSGADDHQSYVPF 180

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDI 119
            A     + +   D  +        + +I+ D F++      H +  +  ++K+ ++G +
Sbjct: 181 KAGQLEKSPRETADHFANEIEKTLRLAEINPDIFVKPHFSTFHIEFVKEFFEKLWNEGKL 240

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            +      +  + + +  +  V           DG        P   ++      +    
Sbjct: 241 VEKEVDILFCKQCDKHLYEAYVRGNCPHCDELSDGNACEKCGRPNLCIDLLNPTCKCCGS 300

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-------------WGIK 219
           + +     +          +  +    +K G    +L  +  D             WGI 
Sbjct: 301 EPEKSKIKQLFFPLSNYKTQLKQYYKELKIGPHLTALCERMLDEDLPDIPISHVSDWGIP 360

Query: 220 IPDD--PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFWPAD----LHVIGKDILRF 270
           +P +      +YVW +    Y           N   +   FW       ++  G D   F
Sbjct: 361 VPVEGYENQTIYVWFEMAPGYLSATNELIQDKNLSYTLRDFWNNQDTTIINFFGYDNGYF 420

Query: 271 HAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
           H++ +PA  L+   ++ LPK + ++ F   +G K S S G+ +   E++E    D +RY+
Sbjct: 421 HSVLFPAIWLAYSEDINLPKTMITNEFYQLEGLKFSTSRGHAVWGKELLENASHDVVRYY 480

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L        +  +  +     V+ +L     + +      +  ++    P     + +  
Sbjct: 481 LSYSRPETVETNFTMEEFNHIVDTNLNQEWESWLHDLKCKLEAEFANGAPELETLSGNYL 540

Query: 389 SILSVCSRVLQEIRENMQNQLIH--RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                 +R++ EI    +       + +  +  LV    ++   ++   + K N  R +T
Sbjct: 541 MYYQHVNRIMNEIMNAYEPNTFSPQKVVRLLNELVRIAKKFSAGEEFLTVLKNNQQRRNT 600

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            + + +   + LA+     +P     ++  L    + +  + +   L  G  +
Sbjct: 601 AIALELYTAKILALFSSPIMPTFGKMLWGDLGFNVDMQLDEEV-SFLPAGQKV 652


>gi|289167262|ref|YP_003445529.1| valyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288906827|emb|CBJ21661.1| valyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 883

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + +   N        A   + + + +  
Sbjct: 589 TLEQATANVERVVNKEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++     I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKANPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|319947518|ref|ZP_08021750.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746458|gb|EFV98719.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 883

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 130/354 (36%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + +   N        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGREKFLEKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|237736668|ref|ZP_04567149.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420530|gb|EEO35577.1| valyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 886

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 84/385 (21%), Positives = 144/385 (37%), Gaps = 46/385 (11%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +       V+    + +F ++     K L    +    I+P  R  ++       +
Sbjct: 340 HNVGHCYRCSTVVEPRVSKQWFVKMEPLAKKALEVVRNGEIKIIPK-RMEKIYFNWLENI 398

Query: 205 KDLSLSRKTFDWG--IKIPDDPQY------------------------------IMYVWI 232
           +D  +SR+   WG  I     P                                ++  W 
Sbjct: 399 RDWCISRQ-LWWGHRIPAWYGPDNHMFVAMTEEEAYAQAKAHYGKDVELVQEEDVLDTWF 457

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVF 291
            +     +T G+ +        F+P    V G DI+ F       F L     +P K VF
Sbjct: 458 SSALWPFSTMGWPEKTK-ELETFYPTSTLVTGADIIFFWVARMIMFGLYEMKEIPFKNVF 516

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            HG +  + G K+SKSLGN  DP+ +IEE G DA+R+ ++   + G+D ++ +  L+  +
Sbjct: 517 FHGIVRDELGRKMSKSLGNSPDPLNLIEEYGADAIRFSMLYNTSQGQDVYFSEKLLE--M 574

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQ 408
             + AN I N V+R V M L+ +D              DE I S  +   +E+ + +   
Sbjct: 575 GRNFANKIWN-VARFVIMNLEGFDVKSVNKDELKFELVDEWIFSRLNETTKEVHDCLDKF 633

Query: 409 LIHRALAQVISLV--SEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQA 464
           L+  A   V   +     D Y +  K           +  +T  YV   V+     LL  
Sbjct: 634 LLDDAAKAVYEFLRGDFCDWYVELAKVRLYNNEESGKESKTTAQYVLWTVLEAGLKLLHP 693

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
           F+P +  +I+  + V  E       
Sbjct: 694 FMPFITEEIWQKIKVEGETIMLSQF 718



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GH  +  I D L R+ R+ GL+ L+  G D  G      
Sbjct: 33  EGKESYSIVIPPPNVTGILHMGHILDNSIQDTLVRYKRMCGLNTLWVPGCDHAGIATQNK 92

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                            +     T  + ++      +    +  S  +D    T ++   
Sbjct: 93  VERMLAEQGIKKEDLGREKFLEETWKWKEKYGGIITNQLRKIGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  + + G IY+G Y   +  R      DDEV              PV+  +E
Sbjct: 153 KAVRKIFVDLYNDGLIYQGEYMVNWCPRCGTALADDEVDHAEKDGNLWHLKYPVKDSDE 211


>gi|313123426|ref|YP_004033685.1| valyl-tRNA synthetase (valine--tRNA ligase) (valrs) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279989|gb|ADQ60708.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 879

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 132/358 (36%), Gaps = 34/358 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK+L   +         +R    +      + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D  Q ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N + N     +  + +
Sbjct: 531 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKLWNASRFVIMNLPE 588

Query: 372 DYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D      P    F  +D  I    +  ++E            A  ++ + +     D Y 
Sbjct: 589 DAKPAQKPDTSKFDLADAWIFDRLNHTVKETNRLFDEFQFGEAGREMYNFIWNDFCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K   L   + +  +        ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 649 EISKV-ALYGDDAELKARKQANLTWILDQILRLIHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  I D L R+ R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEARLREQGVSRYDLGRKKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  +     +D EV    D
Sbjct: 153 KAVRRVFVQLYNEGLIYRGEYIINWDPKLRTALSDIEVVHQDD 195


>gi|307710391|ref|ZP_07646831.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618868|gb|EFN98004.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 883

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 131/354 (37%), Gaps = 38/354 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F +++      ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMNQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNAEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGFAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPT--------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                T          A   +D  IL   +  + +   N        A   + + + +  
Sbjct: 589 TLEQATANVEKVVNKEAGNVTDRWILHNLNETIGKATANFDKFEFGVAGHILYNFIWDEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L   N +       V +  + ++  LL   +P +  +IF  +
Sbjct: 649 ADWYVELTK-EVLYSDNEEEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQI 701



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGITRYDLGREKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|295105821|emb|CBL03364.1| valyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 896

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 133/384 (34%), Gaps = 40/384 (10%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    D               H  ++  E E +F  +   +       E       P  
Sbjct: 341 DELGLLDHVEDHDHSVMTCYRCHTKLEPWESEQWFVAVDGLKRDAARVVEDGSIQFHPE- 399

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---------------------------DP 224
           R  +V       LKD  +SR+   WG +IP                              
Sbjct: 400 RWRQVYLDWLENLKDWCISRQ-LWWGHRIPMFYCDECGWEDASVEDIEACPVCGKPVRQD 458

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDILRFH--AIYWPAFLL 280
           + ++  W  +      T G+ +    +      +P  +    +DI+      +   +   
Sbjct: 459 EDVLDTWFSSQLWPFATMGWTEEGVDAPEMRAAYPTQVLSTARDIMGLWVARMVMASMYC 518

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  +P    +     +   G+ +SKS GN +DP+ ++E+ G D +R+ L+ ++   +D  
Sbjct: 519 TEQIPFEHVIIHPTVMAADGKPMSKSRGNGVDPLRLMEDYGADGMRFGLLMQVTGAQDLK 578

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +++  L+   N   AN I N  +R V M L  Y+   P P   T +D  I S  + ++  
Sbjct: 579 FNEAKLESSRN--FANKIRN-AARFVMMNLDGYEPGEPAPS--TPADRWIFSRLAGLVAR 633

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +           A  ++ +       D Y +  K       +P          V V+ Q 
Sbjct: 634 LDAAFDGFEFGEATRELYAFFWNEFCDWYIEFSKARLGAGADPADRLACQRNLVFVLDQA 693

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
             LL   +P +  +I+  L +  E
Sbjct: 694 LRLLHPIMPFVTEEIYQELPIDRE 717



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 48/178 (26%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I           H+GHA    I D   R  R+ G    +  GTD  G      
Sbjct: 44  KKGQPYTIVIPPPNITGVLHMGHALNDTIQDTCIRRARMQGRPARWILGTDHAGISTQTK 103

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     +  +      +    +  S  YDD   T E  + 
Sbjct: 104 VDKKLADQGISRLEIGREAFVEACYDWYKEYGTTIVNQIKGMGCSCDYDDEHFTLEPAYV 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R L+        IYKG     +        +DDE     +  +      P+   E
Sbjct: 164 KAVRKLFVDWYHDDLIYKGKRIVNWCPHCTTSISDDEAEYVDEAGHLWYLRYPLTEPE 221


>gi|295425100|ref|ZP_06817805.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065159|gb|EFG56062.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 890

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 138/359 (38%), Gaps = 36/359 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    +K+L   ++  +     ER    +      + D  +SR+   W
Sbjct: 363 VEPRLSKQWFVKMKPLAEKVLENQKTEGKVNFVPERFEHTLEQWMGDVHDWCISRQ-LWW 421

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D      
Sbjct: 422 GHRIPAWYNKKTGETYVGEEAPKDIENWDQDPD-VLDTWFSSALWPFSTLGWPDTNADDF 480

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN 
Sbjct: 481 KRYFPTNALVTGYDIIFFWVSRMIFQSLHFTHERPFKDVVLHGLMRDPQGRKMSKSLGNG 540

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++V+ + G DALR+FL+   A G+D  YD   L    N    N I N     +  + 
Sbjct: 541 VDPMDVVNKYGCDALRWFLLNGTAPGQDTRYDPKKLSAAWN--FINKIWNASRFVIMNLP 598

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
            D     +P    F  +D  I    + V+ E+           A  ++ + +     D Y
Sbjct: 599 ADAKPAHMPDTSKFDLADSWIFDRLNHVVGEVIRLFDEYKFGEAGRELYNFIWNDFCDWY 658

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +  K   L   + +  +      + ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 659 IEISKV-ALNGDDQELKARKQENLIWILDQILRLMHPIMPFVTEKLW--LSMPHEGKSI 714



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 44  KKAHPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 103

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +K   
Sbjct: 104 VEARLREQGIDRHQLGREKFLKQVWEWKDEYANIIKGQWAKMGLSLDYSRERFTLDKGLS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  + E   +D EV    D
Sbjct: 164 KAVRKVFVQLYNEGLIYRGEYIINWDPKLETALSDIEVIHKDD 206


>gi|300811354|ref|ZP_07091851.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497718|gb|EFK32743.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 879

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 132/358 (36%), Gaps = 34/358 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK+L   +         +R    +      + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D  Q ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+++I++ G DALR+FL+   A G+D  +    +    N    N + N     +  + +
Sbjct: 531 DPMDIIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKLWNASRFVIMNLPE 588

Query: 372 DYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D      P    F  +D  I    +  ++E            A  ++ + +     D Y 
Sbjct: 589 DAKPAQKPDTSKFDLADAWIFDRLNHTVKETNRLFDEFQFGEAGREMYNFIWNDFCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K   L   + +  +        ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 649 EISKV-ALYGDDAELKARKQANLTWILDQILRLIHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  I D L R+ R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEARLREQGVSRYDLGREKFMEKVWEWKDEYANIIKSQWQKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  +     +D EV    D
Sbjct: 153 KAVRRVFVQLYNEGLIYRGEYIINWDPKLRTALSDIEVVHQDD 195


>gi|217967477|ref|YP_002352983.1| valyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336576|gb|ACK42369.1| valyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 881

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 148/385 (38%), Gaps = 47/385 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            D    +    P++ +  E +F R+       +   E      +P  R  +V       +
Sbjct: 341 HDLATCDRCGTPIEPLISEQWFMRMENLAKPAIEVVEKGEVKFIPD-RWKKVYFDWMYNI 399

Query: 205 KDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALT 236
           KD  LSR+   WG +IP                               + ++  W  +  
Sbjct: 400 KDWCLSRQ-LWWGHRIPAWYCENCGHVNVEEQKPEKCERCGSENLRQDEDVLDTWFSSAL 458

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
             L T G+ ++ +     F+P  +    +DI+      W A ++   L   K+V  +   
Sbjct: 459 WPLGTLGWPEDTE-DLNYFYPTSVLSTARDIIN----LWVARMIMMGLEFRKEVPFYYVY 513

Query: 297 LH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           +H      +G+++SKS G  +DP+E+I + G D  R+ L  +    +D  + ++  +   
Sbjct: 514 VHPTVLTREGKRMSKSKGTGVDPLELINKYGADVTRFGLAIQCTEMQDLRFHEENFENTK 573

Query: 351 NADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           N    N I N     +S +    DY+ +  T  + + SD+ ILS   + + E+ ++++N 
Sbjct: 574 N--FTNKIWNAARFVISNLDFNIDYNEVDLTKHSLSLSDKWILSRLQKTVYEVTDHLENF 631

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
                +  + +       D Y +  KP      +P+       +  +V+++   LL   +
Sbjct: 632 RFSEYVKTIYTFFWSEFCDWYIELSKPRLSNTEDPESRLIAQVILWKVLKESMQLLHPVM 691

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  L    E+       +
Sbjct: 692 PFITEEIWQKLPSTHESIMISKWPE 716



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I           H+GHA    I D+L R+ R+ G + L+  GTD  G      
Sbjct: 34  RSKKNYSIVLPPPNITGSLHMGHALNATIQDILIRWRRMQGFNALWIPGTDHAGIATQMV 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +   +                    + +       +    L +S D   F  T ++ + 
Sbjct: 94  VERELLKEGKTRWDLGREKFLERVWQWKENYGNTIVEQLKKLGVSCDWKRFRFTMDEVYS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                 + ++  KG IYKG     +  R +   +D EV    +  +      P+   +
Sbjct: 154 RAVIKAFVELYKKGYIYKGERIINWCPRCKTALSDLEVRYVEENSFLWYIKYPLYQED 211


>gi|104773811|ref|YP_618791.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|103422892|emb|CAI97554.1| Valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 879

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 131/358 (36%), Gaps = 34/358 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK+L   +         +R    +      + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D  Q ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +       P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFIGERPFDNVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N + N     +  + +
Sbjct: 531 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKLWNASRFVIMNLPE 588

Query: 372 DYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D      P    F  +D  I    +  ++E            A  ++ + +     D Y 
Sbjct: 589 DAKPAQKPDISKFDLADAWIFDRLNHTVKETNRLFDEFQFGEAGREMYNFIWNDFCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K   L   + +  +        ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 649 EISKV-ALYGDDAELKARKQANLTWILDQILRLIHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  I D L R+ R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEARLREQGVSRYDLGREKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  +     +D EV    D
Sbjct: 153 KAVRRVFVQLYNEGLIYRGEYIINWDPKLRTALSDIEVVHQDD 195


>gi|116513817|ref|YP_812723.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093132|gb|ABJ58285.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 879

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 131/358 (36%), Gaps = 34/358 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK+L   +         +R    +      + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D  Q ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI + G DALR+FL+   A G+D  +    +    N    N + N     +  + +
Sbjct: 531 DPMDVIAKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKLWNASRFVIMNLPE 588

Query: 372 DYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D      P    F  +D  I    +  ++E            A  ++ + +     D Y 
Sbjct: 589 DAKPAQKPDISKFDLADAWIFDRLNHTVKETNRLFDEFQFGEAGREMYNFIWNDFCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K   L   + +  +        ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 649 EISKV-ALYGDDAELKARKQANLTWILDQILRLIHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  I D L R+ R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEARLREQGVSRYDLGREKFVEKVWEWKDEYANIIKRQWQKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  +     +D EV    D
Sbjct: 153 KAVRRVFVQLYNEGLIYRGEYIINWDPKLRTALSDIEVVHQDD 195


>gi|325125475|gb|ADY84805.1| Valine-tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 879

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 132/358 (36%), Gaps = 34/358 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK+L   +         +R    +      + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D  Q ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N + N     +  + +
Sbjct: 531 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKLWNASRFVIMNLPE 588

Query: 372 DYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D      P    F  +D  I    +  ++E            A  ++ + +     D Y 
Sbjct: 589 DAKPAQKPDISKFDLADAWIFDRLNHTVKETNRLFDEFQFGEAGREMYNFIWNDFCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K   L   + +  +        ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 649 EISKV-ALYGDDAELKARKQANLTWILDQILRLIHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  I D L R+ R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEARLREQGVSRYDLGREKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  +     +D EV    D
Sbjct: 153 KAVRRVFVQLYNEGLIYRGEYIINWDPKLRTALSDIEVVHQDD 195


>gi|56750945|ref|YP_171646.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81299398|ref|YP_399606.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820674|sp|Q5N3J4|SYV_SYNP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56685904|dbj|BAD79126.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168279|gb|ABB56619.1| valyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 909

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 138/394 (35%), Gaps = 59/394 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     + L             ER  +V       L+D  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIEPLAQRALEALNGEEGPRFVPERWTKVYRDWLENLRDWCISRQ-LW 413

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                            + ++  W  +
Sbjct: 414 WGHQIPAWYAVSETNGVVTDSTPFVVAKSAEEAQQQAIAQFGPDVVLQQDEDVLDTWFSS 473

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +  +     F+P    V G DI+ F    +   A   +  +P       
Sbjct: 474 GLWPFSTLGWPNQTE-DLETFYPTSTLVTGFDIIFFWVARMTMMAGHFTGKMPFKDVYIH 532

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI-ACGKDGFYD-----KDGL 346
                   +K+SKS GN IDP+ +I+  G DALRY L+RE+   G+D   D      +  
Sbjct: 533 GLVRDENNKKMSKSAGNGIDPLILIDRYGTDALRYALIREVVGAGQDIRLDYNRKTDESA 592

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  SR V + L D       +        +D  ILS      + +  
Sbjct: 593 TVETSRNFANKVWN-ASRFVMLNLDDKTPEQLGMAATADLELADRWILSRYHATTEALIN 651

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++   +  A  Q+   +     D Y +  KP  L   +            +++  +  L
Sbjct: 652 QIEAYDLGAAAKQLYEFIWGDFCDWYIELVKP-RLYGEDAQSRLVAQQTLAQILEGILRL 710

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           L  F+P +  +I+  L    E++ F +L    +P
Sbjct: 711 LHPFMPHVTEEIWHTLNQVGEDQ-FLALQSFPQP 743



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----K 60
           E   I           H+GHA+E  + DVL RF R+ G + L+  GTD     +     +
Sbjct: 40  EPYCIVIPPPNVTGSLHMGHAFEASLIDVLIRFQRMRGKNALWLPGTDHASIAVQTILDR 99

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADV----------------LDISYDDFIRTTEKRHHD 104
             +  G++      +                           +D S + F  T ++    
Sbjct: 100 QLREEGLSRYDLGREKFLERAWQWKAESGGTIVGQLRRLGVSVDWSRERF--TMDEGLSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ ++G IY+G Y   +    ++  +D EV  
Sbjct: 158 AVLEAFIQLYEEGLIYRGQYLVNWCPASQSAVSDLEVEM 196


>gi|330836357|ref|YP_004410998.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748260|gb|AEC01616.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 884

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 141/368 (38%), Gaps = 39/368 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +  +    +  ++    + +F R+    DK L  ++       P    N   S   
Sbjct: 339 PYVHEVGHCYRCNTIIEPYLSDQWFVRMRGMADKALKAWKDGEVTFYPRRWENT-YSSWL 397

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
             ++D  +SR+   WG  I +                                ++  W  
Sbjct: 398 ENIRDWCISRQ-LWWGHRIPVWYCEDCGEMIVSRNDVTVCPKCGSSHLRQEEDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ ++    K +F+P    + G DI+ F    +   +   +  +P      
Sbjct: 457 SWLWPFSTLGWPEDTPDLK-EFFPTQTLITGYDIIFFWVARMIMASLEFTGKVPFKDVYM 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G K+SKSLGN IDP+EV++  G DA+++ L    A G+D   D D  K  + 
Sbjct: 516 TGLVRDRQGRKMSKSLGNGIDPLEVVDLYGADAMKFTLAYMAAQGQDVLLDMDSFK--MG 573

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +  AN I N  SR + M L+    +       +  D+ I +  +    ++R  ++    +
Sbjct: 574 SRFANKIWN-ASRFLLMRLEGRTKVTVEEKDLSVMDKWIFAELNHAAGKVRAALEGYRFN 632

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +A K   L+  +P      + + ++++ +   LL  F+P +
Sbjct: 633 EASQTVYDFFWNDFCDWYIEASKH-NLESNDPVVQDRAVSLLLDILEESLRLLHPFLPFI 691

Query: 470 ANKIFDIL 477
             +I+  L
Sbjct: 692 TQEIYSKL 699



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D + R+ R+ G   L+  GTD  G       + 
Sbjct: 37  KPFTIVMPPPNVTGILHMGHALNNSLPDTIIRYQRMAGRKTLWVPGTDHAGIATQNVVER 96

Query: 65  A------------GVTTKVFVDQNSRNFR----DMADVLDISYDDFIR--TTEKRHHDTC 106
                                 Q  +          + +  S D      T ++      
Sbjct: 97  QLAREGLSRHDLGREKFLERTWQVKKKHHSVIVKQLEKIGCSCDWEHERFTMDEGLSRAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           R  +  + ++G IYKG Y   Y         DDEV  
Sbjct: 157 REAFVTLYERGLIYKGKYLINYCPHCGTALADDEVEY 193


>gi|227524312|ref|ZP_03954361.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088543|gb|EEI23855.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 893

 Score =  186 bits (472), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 79/350 (22%), Positives = 138/350 (39%), Gaps = 36/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ +   ++  +      R  E  +     + D  +SR+   W
Sbjct: 368 VEARLSTQWFVKMKPLAEQAVKNQDTDDKVSFFPPRFEETFTQWMDNVHDWVISRQ-LWW 426

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D+ D  K
Sbjct: 427 GHQIPAWYNKDTGETYVGMEAPKDAENWEQDPD-VLDTWFSSALWPFSTMGWPDDTDDMK 485

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 486 -RYFPTDTLVTGYDIIFFWVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNG 544

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +  D +    N    N I N  SR V M L
Sbjct: 545 IDPMDVIDKYGADALRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL 601

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
              +   +P    +  SD+ ILS  +  + E+ E         A  ++   +     D Y
Sbjct: 602 DGIEKPKLPDKSEWQLSDKWILSRLNTTISEVSELFDKYNFGEADRKLYDFIWNDFCDWY 661

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L   N         V   V+ ++  LLQ  +P +   ++  +
Sbjct: 662 IEMSK-EALTGDNEKLKKNTQNVLAYVLDKILRLLQPIMPFVTEYLWQKM 710



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R++G D L+  G D  G      
Sbjct: 44  KKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAK 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D  +   ++    L +S D      T +K   
Sbjct: 104 VEAKLREQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERFTLDKGLS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 164 KAVRRVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDD 206


>gi|308273079|emb|CBX29683.1| Valyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 896

 Score =  186 bits (472), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 71/395 (17%), Positives = 140/395 (35%), Gaps = 38/395 (9%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           D ++   +   +L++E      E  K   G  Y      ++    + +F ++     K +
Sbjct: 324 DRFECRKAVIKALKEEGLLIKIEPIKHNVGHCYR-CKTIIEPNLSKQWFVKVKPLAQKAI 382

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD---------------------- 215
              +     I+P    +    ++   ++D  +SR+ +                       
Sbjct: 383 EAVKDKKTRIVPEMWASTYYDWMN-NIRDWCISRQIWWGHQIPAWTCEECLHLVVAMESP 441

Query: 216 -----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                 G         ++  W  +     +T G+ +  D  K+ F+P  + V G DIL F
Sbjct: 442 ATCPGCGCSRLVQETDVLDTWFSSALWPFSTMGWPEETDLLKS-FYPTSVLVTGFDILFF 500

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +         ++P              G+K+SKS GNVIDP+ +I++ G D+ R  
Sbjct: 501 WVARMMMMGIHFMGDVPFKDVYVHALVRDEDGKKMSKSKGNVIDPLNIIDKYGTDSFRMT 560

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L    A G+D    +  ++        N   N    ++  + ++         + +  D+
Sbjct: 561 LAVFAAQGRDIKMSEKRVEG--YRHFINKFWNAARFALMHLTEN--HSDLKFDSISLPDK 616

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            IL+    V   + + +     + A + +   V     D Y +A KP        ++   
Sbjct: 617 WILARLKNVSGIVADAIDGYRFNDAASALYKFVWHELCDWYLEAIKPCLYGNMGEEKKDA 676

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           VL V   V   + ILL    P +  +I+  L   +
Sbjct: 677 VLGVLQRVFHDVLILLHPITPFVTEEIWHKLPGTE 711



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 19/173 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +++   I           H+GHA  + + D+L R+ RL G +VL+  GTD  G     
Sbjct: 42  LSDKKSYSIVIPPPNVTGVLHMGHALNITMQDILCRYRRLRGDNVLWMPGTDHAGIATQN 101

Query: 61  AAQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
             +    +                   + +Q      +    L  S D  +   T ++  
Sbjct: 102 VVEKKLASENTDRHKLGREKFIEAVWEWRNQYGSAIINQLKRLGASCDWKLERFTMDEGL 161

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
               R ++ ++  +  IY+G Y   +  R      D EV     DG  Y+ ++
Sbjct: 162 SVAVRKVFVQLYKEDLIYRGNYIINWCHRCHTALADLEVEYEELDGHLYHIRY 214


>gi|313673271|ref|YP_004051382.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940027|gb|ADR19219.1| valyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 874

 Score =  186 bits (472), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 82/415 (19%), Positives = 148/415 (35%), Gaps = 25/415 (6%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
            +D F                K +    +I+K  +      R +         +      
Sbjct: 314 GFDRF------EARKLIVEELKNLGLLENIHKHIHKVGGCYRCKTVVEPRISMQWFVKIK 367

Query: 150 YNAQ--HNPVQWMEEEGYFFRL--SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
             A+     V+    + +      + Y+             I    R           L 
Sbjct: 368 PLAEEAIKAVENGSIKIFPQNWEKTYYEWMYNIRDWCISRQIWWGHRIPVWYCNECGHLT 427

Query: 206 -DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            D+         G K       ++  W  +     +T G+ +    +  KF+P    V G
Sbjct: 428 VDIEDPDSCEKCGSKNIIQDNDVLDTWFSSALWPFSTMGWPEKNK-TIEKFYPTSCLVTG 486

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVG 321
            DIL F    +           P  K V+ H  +  + G+K+SKS GNVIDP+ +I++ G
Sbjct: 487 FDILFFWVARMIMMGQKFMKKEPF-KHVYIHALVRDQYGQKMSKSKGNVIDPLVIIDKYG 545

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+ R+ L    A G+D    +D ++     +  N I N  SR + M L  Y    P   
Sbjct: 546 ADSFRFTLASLAAQGRDIKLSEDRIEG--YRNFVNKIWN-ASRFILMNLGGYKPKDPVLE 602

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT 439
              + D+ ILS+      ++ + +++   + A  ++         D Y +  K    K  
Sbjct: 603 KLNKEDKWILSMLKDTADDVAKAIESYNFNEAALKIYHFFWLNFCDWYIEFIKIRIFKNE 662

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           N D A   L   V V+++  I+L  F+P +   I+ ++    E+   ++  + L 
Sbjct: 663 NKDEA---LDTAVYVLKKSLIILHPFMPFVTEYIYKLIG-EKESIMLENYPKGLP 713



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+L R+H+L G + ++  GTD  G      
Sbjct: 35  SQKPSYSIVIPPPNVTGSLHMGHALNNTLQDILIRYHKLIGFETMWIPGTDHAGIATQNV 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
            +    +                   + +++          L     +D    T ++   
Sbjct: 95  VEKMLHSEGLTRHDLGREKFIERVWKWKEESGGTIIRQLKRLGSACDWDRERFTMDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              RI++  +  +G IY+  Y   +  R     +D EV  
Sbjct: 155 RAVRIVFVTLYKEGLIYRSNYIVNWCPRCHTALSDLEVEH 194


>gi|298243616|ref|ZP_06967423.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556670|gb|EFH90534.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 900

 Score =  186 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 138/371 (37%), Gaps = 43/371 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+ +  + +F ++       +   +     I+P  R N+        + D  
Sbjct: 356 HCQRCDTVVEPLISKQWFVKMKPLATPAIGAVKHGLIRIVPE-RFNKTYMDWLENIHDWC 414

Query: 209 LSRKTFDWG--IKIPDDP--------------------------QYIMYVWIDALTNYLT 240
           +SR+   WG  I +                              + ++  W  +     +
Sbjct: 415 ISRQ-LWWGHRIPVWYCETCGEMSVSREDVTACLHCHSTAVRQDEDVLDTWFSSWLWPFS 473

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+  +    + +++P  +   G DI+ F    +          +P             
Sbjct: 474 TLGWPGDSADLR-RYYPTAVMETGYDIIFFWVARMVMAGIHFMGTVPFSTIYLHGLVRDA 532

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KGEK+SKS  NVIDP+EV+++ G DALR+ L      G D    ++ +    N + AN I
Sbjct: 533 KGEKMSKSKNNVIDPLEVMDKFGTDALRFTLATSSTPGNDMKLIEERIVG--NRNFANKI 590

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            N  SR V M   +  G +P   A    T +D  IL   +R+ Q +   + +  +  A  
Sbjct: 591 WN-ASRFVLMSTAEVGGGVPDISAVKPRTLADRWILQRLNRLAQSVTRLINDFQLGEAGR 649

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           Q+         D Y ++ K     + +     +   +   V+ Q   LL  F+P +  ++
Sbjct: 650 QINDFFWSDYCDWYVESAK--VQMQGDEAMRQSTTAILRAVLDQSLRLLHPFMPFVTEEV 707

Query: 474 FDILFVADENR 484
           +  L+   E+ 
Sbjct: 708 WQHLYRLTESD 718



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 22/182 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+   IS          H+GH     + D+L R+HR+ G + L+  G D  G       
Sbjct: 39  ERKPFVISMPPPNVTGALHLGHGITSTVEDILIRYHRMLGDETLWVPGEDHAGIATQTVV 98

Query: 63  QNAGVTT----------------KVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRH 102
           +                        +V Q         R +    D S + F  T ++  
Sbjct: 99  ERLIAKEGTDRHKLGREAFLERVWQWVHQYKGRIQDQHRRLGASCDWSRERF--TLDEGL 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               R ++  + ++G IY+G     +  R  +  +D EV              P++ +E 
Sbjct: 157 SHAVREVFVSLYEEGLIYRGERIINWCPRCMSALSDLEVNHVDTPGKLTYVRYPLKPVEG 216

Query: 163 EG 164
           E 
Sbjct: 217 ES 218


>gi|227513097|ref|ZP_03943146.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083672|gb|EEI18984.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 893

 Score =  186 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 79/350 (22%), Positives = 137/350 (39%), Gaps = 36/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ +   ++  +      R  E  +     + D  +SR+   W
Sbjct: 368 VEARLSTQWFVKMKPLAEQAVKNQDTDDKVSFFPPRFEETFTQWMDNVHDWVISRQ-LWW 426

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D+ D  K
Sbjct: 427 GHQIPAWYNKDTGETYVGMEAPKDAENWEQDPD-VLDTWFSSALWPFSTMGWPDDTDDMK 485

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 486 -RYFPTDTLVTGYDIIFFWVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNG 544

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +  D +    N    N I N  SR V M L
Sbjct: 545 IDPMDVIDKYGADALRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL 601

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
              +   +P       SD+ ILS  +  + E+ E         A  ++   +     D Y
Sbjct: 602 DGIEKPKLPDKSECQLSDKWILSRLNTTISEVSELFDKYNFGEADRKLYDFIWNDFCDWY 661

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L   N         V   V+ ++  LLQ  +P +   ++  +
Sbjct: 662 IEMSK-EALTGDNEKLKKNTQNVLAYVLDKILRLLQPIMPFVTEYLWQKM 710



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R++G D L+  G D  G      
Sbjct: 44  KKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAK 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D  +   ++    L +S D      T +K   
Sbjct: 104 VEAKLREQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERFTLDKGLS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 164 KAVRRVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDD 206


>gi|124024602|ref|YP_001018909.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964888|gb|ABM79644.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9303]
          Length = 947

 Score =  186 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 76/398 (19%), Positives = 134/398 (33%), Gaps = 27/398 (6%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + +       +             +     V       Y +   +   W      ++   
Sbjct: 390 EPLLSTQWFVRMEPLAARCHECLDHGAPRFVPNRWQKVYRDWLTDIRDWCISRQLWWGHR 449

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                ++S  +       P           +S  +    +R  F   + I  D   ++  
Sbjct: 450 IPAWFVVSETDDQLTDATP-------YLVARSEEEAWQQARDQFGEAVVIQQDED-VLDT 501

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D        ++P    V G DI+ F    +   A   +  +P   
Sbjct: 502 WFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIFFWVARMTMMAGAFTGRMPFAD 561

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK 347
                     +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D   
Sbjct: 562 VYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKS 621

Query: 348 K-RVNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQE 400
                 + A    N +  +    L +  G  P       P +   +D  ILS  +R+ ++
Sbjct: 622 DTSATVEAARNFANKLWNATRFALMNLGGETPASLGEPDPASLQLADRWILSRLARMTRD 681

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVE 453
           + E   +  +  A   +         D Y +  K       +P         T   V  +
Sbjct: 682 VAERYDSYRLGEAAKCLYEFAWNDICDWYLELSKRRLHPGEDPSDEVLADQCTARQVLAK 741

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSL 489
           V+  L ++L   +P L+ +++  L  A  D     QS 
Sbjct: 742 VLADLLVMLHPLMPHLSEELWHGLTGAPKDTFLALQSW 779



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 68  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTILEK 127

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  + +++     D    L  S D     F  T ++    
Sbjct: 128 QLKAEAISRYDLGREAFLERAWAWKEESGGRIVDQLRRLGYSVDWQRQRF--TLDEGLSA 185

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R  + ++ ++G IY+G Y   +     +  +D EV       +      P+
Sbjct: 186 AVREAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHLRYPL 238


>gi|300813517|ref|ZP_07093854.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512371|gb|EFK39534.1| valine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 372

 Score =  186 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 10/263 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
           K     +  +  W  +     +T G+    +     F+P D+ V G DI+ F    + + 
Sbjct: 11  KTFTQDEDTLDTWFSSALWPFSTLGWPQKTE-DLDYFFPTDVLVTGYDIIFFWVIRMVFS 69

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +      LP    + +       G K+SKSLGN IDP+++I+E G DALR+ LV     G
Sbjct: 70  SLEQMGQLPFKDVLLNGLVRDELGRKMSKSLGNGIDPLDIIDEYGADALRFTLVTGNTPG 129

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  +    ++   N   AN + N     +  +  D            + D+ I+S   +
Sbjct: 130 NDMRFYIKRVESSRN--FANKLWNATRFIMMNLSDDISDSNFLIDELQDQDKWIISKLEK 187

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++ I E +    I  A A +   +     D Y +  KP  L      + +    V + V
Sbjct: 188 TIKSITEKIDKYEIGLAAADIYDFIWSDFCDWYIEMVKP-VLYSEG--QKTNTQKVLLFV 244

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  +  LL  F+P +  +I+  L
Sbjct: 245 LENILKLLHPFMPFITEEIWQTL 267


>gi|258508256|ref|YP_003171007.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148183|emb|CAR87156.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 880

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 382 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 441

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 442 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 502 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 562 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 618

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 619 KQVTDLSARFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 677

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 678 QILRLLHPVMPFVTEKLWLAL 698



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 95  VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 155 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 197


>gi|258539468|ref|YP_003173967.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151144|emb|CAR90116.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 880

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 382 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 441

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 442 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 502 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 562 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 618

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 619 KQVTDLSARFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 677

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 678 QILRLLHPVMPFVTEKLWLAL 698



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 95  VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 155 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 197


>gi|199597497|ref|ZP_03210926.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199591520|gb|EDY99597.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 880

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 382 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 441

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 442 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 502 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 562 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 618

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 619 KQVTDLSARFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 677

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 678 QILRLLHPVMPFVTEKLWLAL 698



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 35  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAK 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 95  VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 155 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 197


>gi|320528328|ref|ZP_08029490.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131242|gb|EFW23810.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 870

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 33/380 (8%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVK 201
              +  +    H  V+    + +F ++    + +L +  +   +     ER  +  +   
Sbjct: 338 MTHNVAHSERTHCVVEQYLSQQWFVKMKPLAEDVLKHQADEETKINFYPERFEKTFNGWL 397

Query: 202 SGLKDLSLSRKTFDWGIKI-----------------------PDDPQYIMYVWIDALTNY 238
             ++D  +SR+   WG +I                           + ++  W  +    
Sbjct: 398 ENIEDWCISRQ-LWWGHRIPAWYNTVTGETYVGETDPEDTTNWVQDEDVLDTWFSSALWP 456

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
             T G+ +  +   A+++P +  V G DI+ F    + + A   + N P    +      
Sbjct: 457 FATLGWPEETE-DLARYYPTNTMVTGYDIIFFWVARMAFQARHFTKNRPFKDVLIHGLLR 515

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN IDP++VIEE G+DALR+FL      G+D  Y  + ++   N    N
Sbjct: 516 DAQGRKMSKSLGNGIDPMKVIEEYGIDALRFFLTTNSTPGQDMRYIPEKVEAAGN--FIN 573

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N        + +            + +D  I++  +  +  + ENM+         +
Sbjct: 574 KIWNASRFVFMNLPEGMKVEDVDLTHLSLADAWIINRLNETITHVTENMEKYEFALVGNE 633

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + S V +     Y +  K   L  T+              ++ +  LLQ F+P +  +I+
Sbjct: 634 LYSFVWDDFCSWYVEMSKT-ALNGTDEVAKRAAQSTLYVCLKAIVGLLQPFMPFVTEEIY 692

Query: 475 DILFVADENRCFQSLDQRLK 494
           D+L  A E+   +S    ++
Sbjct: 693 DLLPGAKESINLESWPTMIE 712



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I           HIGHA++  + D+++R+ R+ G D+LF  G D  G      
Sbjct: 33  KSKDPFTIVIPPPNVTGILHIGHAWDNTLQDIISRYKRMQGYDMLFLPGMDHAGIATQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                 +                   +  + ++  R     L  S D      T +   +
Sbjct: 93  VDARLKSEGISRYDLGREKFLERAWEWKAEYAKTIRTQWGKLGNSLDYSRERFTMDDGFN 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEE 162
           D  R ++ K+ ++G IY+G     +        ++ EVY   D G+ Y+ ++   +  EE
Sbjct: 153 DAVRHVFVKLYNEGLIYRGWRIINWDPEARTALSNIEVYYQDDPGKMYHFKYVVKETGEE 212


>gi|310778382|ref|YP_003966715.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747705|gb|ADO82367.1| valyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 884

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/385 (19%), Positives = 134/385 (34%), Gaps = 44/385 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                         V+    + +F ++    +K L    +    I+P  R  +V      
Sbjct: 338 HIHKVGGCYRCDTVVEPRVSKQWFVKMKPLAEKALEVVRNGQVKIVPK-RWEKVYYNWLE 396

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQY------------------------------IMYV 230
            ++D  +SR+   WG  I     P                                ++  
Sbjct: 397 NIRDWCISRQ-IWWGHRIPAYYGPDNHMFVARNPEEAAQQAEAHYGEKVNLTQETDVLDT 455

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D        F+P    V G DIL F    +          +P   
Sbjct: 456 WFSSALWPFSTLGWPDKTK-ELEMFYPTATLVTGADILFFWVARMIMMGLYEMEEIPFET 514

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                      G+K+SKSLGN  DP+++I+E G DA+R+ ++   + G+D  + +  ++ 
Sbjct: 515 VYLHGIVRDENGKKMSKSLGNSPDPLKLIDEYGADAIRFTMLYNTSQGQDVHFSEKLIE- 573

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQ 406
            +  + AN   N VSR V M L+ +D              D+ I S  ++  +++   + 
Sbjct: 574 -MGRNFANKTWN-VSRFVLMNLEGFDIKSVGKNELKLELVDKWIFSKFNKTAKDVAAKLD 631

Query: 407 NQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
              +  A   V   +     D Y +  K       +     T  YV   ++     LL  
Sbjct: 632 KNTLDEAAKSVYEFLRGDFCDWYVEMAKVRLYNAEDEVSKKTAQYVLWTILESSLRLLHP 691

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
           F+P L  +I+  L    +    +S 
Sbjct: 692 FMPFLTEEIWQKLGAEGKTIMLESF 716



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+    I           H+GH     I D + RF R+ G + L+  GTD  G      
Sbjct: 33  EEKPNYSIVIPPPNVTGILHMGHVLNNTIQDTIIRFKRMSGYNTLWQPGTDHAGIATQNK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D++     +    L  S D      T ++   
Sbjct: 93  VERKLAEQGLKKEDLGREKFLEKVWEWKDEHGGLITNQLRKLGASLDWERERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           D+ + ++ K+ +   IY+G Y   +  R      DDEV              P++  +E
Sbjct: 153 DSVKEIFVKLYNDDLIYQGEYMVNWCPRCGTALADDEVDHEEKKGSLWHIKYPIKDSDE 211


>gi|227510169|ref|ZP_03940218.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190374|gb|EEI70441.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 893

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/350 (22%), Positives = 138/350 (39%), Gaps = 36/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ +   ++  +      R  E  +     + D  +SR+   W
Sbjct: 368 VEARLSTQWFVKMKPLAEQAVKNQDTDDKVSFFPPRFEETFTQWMDNVHDWVISRQ-LWW 426

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D+ D  K
Sbjct: 427 GHQIPAWYNKDTGETYVGMEAPKDAENWEQDPD-VLDTWFSSALWPFSTMGWPDDTDDMK 485

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 486 -RYFPTDTLVTGYDIIFFWVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNG 544

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +  D +    N    N I N  SR V M L
Sbjct: 545 IDPMDVIDKYGADALRWFLSVGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL 601

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
              +   +P    +  SD+ ILS  +  + E+ E         A  ++   +     D Y
Sbjct: 602 DGIEKPKLPDKFEWQLSDKWILSRLNTTISEVSELFDKYNFGEADRKLYDFIWNDFCDWY 661

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L   N         V   V+ ++  LLQ  +P +   ++  +
Sbjct: 662 IEMSK-EALTGDNEKLKKNTQNVLAYVLDKILRLLQPIMPFVTEYLWQKM 710



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R++G D L+  G D  G      
Sbjct: 44  KKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRKKRMEGYDTLWLPGMDHAGIATQAK 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D  +   ++    L +S D      T +K   
Sbjct: 104 VEAKLREQGISRYDLGREKFVEKVWEWKDTFAATIKEQWAKLGLSLDYERERFTLDKGLS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 164 KAVRRVFVDLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDD 206


>gi|259649574|dbj|BAI41736.1| valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 901

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 403 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 463 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 522

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 523 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 582

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 583 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 639

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 640 KQVTDLSARFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 698

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 699 QILRLLHPVMPFVTEKLWLAL 719



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 56  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAK 115

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 116 VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 175

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 176 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 218


>gi|317473020|ref|ZP_07932321.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899503|gb|EFV21516.1| valyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 756

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 145/380 (38%), Gaps = 17/380 (4%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQ 158
             ++  + + K + ++G + K           +      E            +     ++
Sbjct: 315 ERYEARKAIVKDLEEQGYLVKIKEHEHNVGTHDRCKATIEPMVKPQWFVKMDELAKPAIE 374

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV----ISFVKSGLKDLSLSRKTF 214
            ++     F    Y    L + E+  ++ +  +             + G   ++  +   
Sbjct: 375 AVKNGDIKFVPERYTKTYLHWLENIRDWCISRQLWWGHRIPAYYCDECGETVVAKEKPEV 434

Query: 215 --DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G       +  +  W  +     +T G+ +  +     F+P ++ V G DI+ F  
Sbjct: 435 CPKCGCTHFTQDEDTLDTWFSSALWPFSTLGWPEQTE-ELDYFYPTNVLVTGYDIIFFWV 493

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             + +  +  +   P    +        KG K+SKSLGN IDP+EVI + G DALR+ LV
Sbjct: 494 VRMVFSGYEHTGKAPFDTVLIHGLVRDDKGRKMSKSLGNGIDPLEVISQYGADALRFTLV 553

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G D  +  + ++   N   AN + N  SR + M  +  D         T +D  I
Sbjct: 554 TGNAPGNDMRFYMERVEASRN--FANKVWN-ASRFMMMNFEQADFSHVELSDLTSADRWI 610

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS  + + +++ +NM    +  A+ ++   + E   D Y +  KP  L     +  +  L
Sbjct: 611 LSKFNTLAKDVTDNMDKYELGIAVQKLNDFIWEEFCDWYIEMVKP-RLYNDEDNTKAAAL 669

Query: 449 YVTVEVIRQLAILLQAFVPK 468
           +   +V+ +   LL  F+P 
Sbjct: 670 WTLKKVLSESLKLLHPFMPF 689



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA +  + D+L RF ++ G + L+  GTD          
Sbjct: 35  SKKPFTIVIPPPNITGKLHMGHALDETLQDILIRFKKMQGYNTLWQPGTDHASIATEVKI 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
             A                      + ++           L     +D    T ++    
Sbjct: 95  IEALKEEGIEKEDLGREKFLERAWEWKEEYGGTIVSQLKKLGSACDWDRERFTMDEGCSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ K+ +KG IYKG     +    +   +D EV       ++     PV
Sbjct: 155 AVEEVFIKLYEKGYIYKGSRIINWCPVCQTSISDAEVEHVDQAGHFWHIKYPV 207


>gi|115625231|ref|XP_001204341.1| PREDICTED: similar to putative methionyl tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
 gi|115634863|ref|XP_782491.2| PREDICTED: similar to putative methionyl tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 305

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 121/291 (41%), Positives = 170/291 (58%), Gaps = 14/291 (4%)

Query: 20  PHIGHAYEMIIADVLARFHRL-DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSR 78
           PHIGH Y   +AD   R+ R+    D +F TGTDEHG K+ KAA+ AG     F ++ S 
Sbjct: 21  PHIGHLYSACLADAAHRWQRILKAPDSIFATGTDEHGLKVQKAARTAGKEPLTFCNEVSH 80

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
            FR + ++ +I Y DFIRTTE+RHH      W  + +KG IYKG Y GWYS+ DE++   
Sbjct: 81  EFRRLFEMCNIGYTDFIRTTEERHHTAVHEFWTSLREKGFIYKGEYEGWYSVTDESFLTT 140

Query: 139 DEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
            ++ +   G     +      N V+W  E  Y FRLSA++DKLL + + +P  + P +  
Sbjct: 141 SQIQEIDRGDGTTIKVSLESGNVVEWTSETNYMFRLSAFRDKLLRWLDDNPSAVQPAKFH 200

Query: 194 NEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           + V  ++  G++DLS+SR+     WGI +PDDP   +YVW+DAL NYLT +GY       
Sbjct: 201 SIVRHWLNEGIQDLSVSRQRDRLGWGIPVPDDPSQTIYVWMDALVNYLTVSGY-----PD 255

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
           +   WP   H++GKDIL+FHAIYWPAFL++A++  P  V  H        K
Sbjct: 256 RTHLWPP-THIVGKDILKFHAIYWPAFLMAADISPPASVICHSHWTRDSFK 305


>gi|229552054|ref|ZP_04440779.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229314571|gb|EEN80544.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 901

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 403 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 463 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 522

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 523 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 582

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 583 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 639

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 640 KQVTDLSARFEFGEMGRTLYNFTWNVFADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 698

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 699 QILRLLHPVMPFVTEKLWLAL 719



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 56  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRMQGFDTLWLPGMDHAGIATQAK 115

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 116 VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 175

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 176 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 218


>gi|260495113|ref|ZP_05815242.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197556|gb|EEW95074.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 887

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 86/399 (21%), Positives = 156/399 (39%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++ ++   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KEQGFFIKTEHLHHAVGQCYR-CGTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDKHVFVAMDEAEAKEQAKKHYGHD 443

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   V+ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 678 YMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKENIGREKFIEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHVEKDGHLWEIKYPVKNSDE 211


>gi|237739887|ref|ZP_04570368.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423495|gb|EEO38542.1| valyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 887

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 86/399 (21%), Positives = 156/399 (39%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++ ++   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KEQGFFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P +  V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTNTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++ + ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  E    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQ 716



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMRGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEEGLKKEDIGREKFLEMTWDWKEKYGGIITQQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|298492495|ref|YP_003722672.1| valyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234413|gb|ADI65549.1| valyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 1006

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 141/374 (37%), Gaps = 55/374 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    DK L + +         +R  +V       L+D  +SR+   
Sbjct: 355 PVEPLLSTQWFVKVRPLADKTLEFLDQQNSPEFVPQRWTKVYRDWLVNLRDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +K+  DP  ++  W  
Sbjct: 414 WGHQIPAWYAVSETGGEITDTTPHFVARNEAEALEKAKSQFGEEVKLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPEQTQ-DVETYYPTTTLVTGFDIIFFWVARMTMMAGHFTGEMPFKTVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
                    +K+SKS  N IDP+ ++++ G DALRY LV+E+A  G+D   + D  K + 
Sbjct: 532 HGLVRDENNKKMSKSANNGIDPLLLMDKYGTDALRYTLVKEVAGAGQDIRLEYDRKKDES 591

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENM 405
           ++ + +    N +  +   ++ + DG  P     P     SD+ I+S   +V+++    +
Sbjct: 592 ISVEASRNFANKLWNAARFVMMNLDGQTPVQLGKPALTELSDKWIISRYHQVVRQTNNYI 651

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            N  +  A   +   +     D Y +  K    K  +P        +  E++  +  LL 
Sbjct: 652 DNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQKDADPASRKVAQQILAEILEGVLKLLH 711

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 712 PFMPHITEEIWQTL 725



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           HIGHA+E  + D L R+HR+ G + L+  GTD     +    +N
Sbjct: 40  EPFCVVIPPPNVTGSLHIGHAFESALIDTLVRYHRMKGHNTLWVPGTDHASIAVQTILEN 99

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + +++     +    L +S D      T ++      
Sbjct: 100 QLKAEGKTRHDVGREKFLERAWQWKNESGGTIVNQLRRLGVSVDWSRERFTLDEGLSKAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++G IY+  Y   +    ++  +D EV              P+
Sbjct: 160 LEAFIRLYEEGLIYRSNYLVNWCPASQSAVSDLEVEPKEVNGNLWHFRYPL 210


>gi|294784265|ref|ZP_06749560.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294488131|gb|EFG35482.1| valine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 887

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/400 (21%), Positives = 157/400 (39%), Gaps = 51/400 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++ ++   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KEQGFFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELNQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           Y+   V+ Q   LL  F+P +  +I+  + V  +    Q+
Sbjct: 678 YMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEEGKKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|86605229|ref|YP_473992.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86553771|gb|ABC98729.1| valyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 912

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 150/412 (36%), Gaps = 58/412 (14%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
               E    +          Y +    P++ +    +F  +S    + L     H     
Sbjct: 331 QWFAEHGLLEKVEEYTHSVPYSDRGGVPIEPLLSIQWFCDVSGMAARCLQEEREHHNPRF 390

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------------- 221
             ER  +V +     L+   +SR+   WG +IP                           
Sbjct: 391 IPERWTKVYTGWLEKLRPWCISRQ-LWWGHQIPAWYPVIDGQLPEDPQAFVVARNAEEAW 449

Query: 222 ---------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                           DP  ++  W  +     +T G+ +  +    +++P  L   G D
Sbjct: 450 AKAREKFGPDVERLERDPD-VLDTWFSSALWPFSTLGWPEETE-DFKRYYPTSLMSTGFD 507

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    +       +  +P      +       G K+SKS GN IDPIE++++ G DA
Sbjct: 508 IIFFWVARMAMMGVQFTGQIPFKDVYINGLVRDEHGAKMSKSKGNGIDPIELLDKYGTDA 567

Query: 325 LRYFLVREI-ACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--- 379
           LRY LV+E+   G+D     D    +  + + A    N +  +   +L + +G  P    
Sbjct: 568 LRYALVKEVVGAGQDIRLAYDRKTGESASVEAARNFANKIWNASRFVLLNLEGQTPAQLG 627

Query: 380 ---PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
              P A   +D  ILS       ++ E ++   +      + SL+ +   D Y +  KP 
Sbjct: 628 SPAPEALELADRWILSRLHSTATQVIEELEAYGLGEGARLLYSLIWDDFCDWYIELVKP- 686

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            L++ +P    T   V   V+  +  LL  ++P +  +++ +L  A++    
Sbjct: 687 RLRREDPTSKRTAQQVLASVLETILRLLHPWMPHITEEVWQLLTQANQATSI 738



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 22/166 (13%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT-- 69
                    H+GHA+   + DV+ R+ R+ G +VL+  GTD     +    +N       
Sbjct: 49  PPPNVTGSLHMGHAFAFTLPDVVVRYKRMRGYNVLWLPGTDHASIAVHTILENQLRQEGK 108

Query: 70  --------------KVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKRHHDTCRILWK 111
                           + +Q+    +     L +S     D F  T ++         + 
Sbjct: 109 SRFDLGREAFLERAWAWKEQSQGTIKSQLRRLGLSLDWTRDRF--TLDEGLSRAVTEAFV 166

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ + G IY+G Y   +    ++  +D EV       +      P+
Sbjct: 167 RLYEAGLIYRGEYLVNWCPATQSAVSDIEVDNKEVKGHLWHFRYPL 212


>gi|209522637|ref|ZP_03271195.1| valyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496686|gb|EDZ96983.1| valyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 908

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 140/385 (36%), Gaps = 56/385 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    D+ L   ++        +R  +V       L+D  +SR+ + 
Sbjct: 355 PVEPLLSTQWFVKIRPLADRALVSLDNQHSPNFVPQRWQKVYRDWLVKLEDWCISRQLWW 414

Query: 216 ------W-----------------------------------GIKIPDDPQYIMYVWIDA 234
                 W                                   G+K+  DP  ++  W  +
Sbjct: 415 GHQIPAWYAVSETGGEITDHTPFLVARTAAEAQEKAIASFGEGVKLQQDPD-VLDTWFSS 473

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +        ++P +    G DI+ F    +       +  +P       
Sbjct: 474 GLWPFSTLGWPEKTP-DLQTYYPTNTLSTGFDIIFFWVARMTMMGGYFTDQMPFQTVYIH 532

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK-KRV 350
              +   G+K+SKS GN IDP+ +I++ G DALRY L+RE I  G+D   + D  K +  
Sbjct: 533 GLILDENGKKMSKSAGNGIDPLLLIDKYGTDALRYTLMREVIGAGQDIRLEYDRSKDESP 592

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIREN 404
           + + +    N +  +   +L +  G  P             SD  ILS  ++ +++  + 
Sbjct: 593 SVEASRNFTNKLWNAARFVLMNLKGQTPAQLGTPNLEELELSDRWILSRFNQTVKQTCDY 652

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M    +  A   +   +     D Y +  K + L+            V   ++  +  LL
Sbjct: 653 MNAYSLGEAAKGLYEFIWGDFCDWYIELAK-YRLQGDGGVSQKVAQQVLAYILEGILKLL 711

Query: 463 QAFVPKLANKIFDILFVADENRCFQ 487
             F+P +  +I+  L    E  C  
Sbjct: 712 HPFMPHITEEIWHTLTQTGEQDCLA 736



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D L R+HR+ G + L+  GTD     +    + 
Sbjct: 40  EPYCIMIPPPNVTGSLHMGHAFNNSLIDALIRYHRMRGYNTLYLPGTDHASIAVQTILER 99

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++     +    L +S D      T ++      
Sbjct: 100 QLREEGKTRYDLGRDKFLDRAWQWKQESGGTIVNQLRRLGVSCDWTRERFTLDEGLSKAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ + G IY+G Y   +    E+  +D EV              P+
Sbjct: 160 IEAFVRLYEDGLIYRGEYLVNWCPASESAVSDLEVENKEVNGNLWHFRYPL 210


>gi|294783024|ref|ZP_06748348.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479902|gb|EFG27679.1| valine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 887

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/399 (22%), Positives = 157/399 (39%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++A++   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KEQAFFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P +  V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTNTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++ + ++   +  A   V   +     D Y +  K   L   N D+     T  
Sbjct: 619 LNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDNEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  E    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQ 716



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMRGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEEGLKKEDIGREKFLEMTWEWKEKYGGIITQQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              + ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVKKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|170743946|ref|YP_001772601.1| valyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198220|gb|ACA20167.1| valyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 903

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 120/354 (33%), Gaps = 43/354 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  +    D+ +          +P         +++  ++   +SR+   W
Sbjct: 372 IEPYLTDQWYLDVKPLADRAMQAVRDGRTRFVPEAYEKTYFQWLEH-IEPWCISRQ-LWW 429

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I    DP                                ++  W  +     +T G+
Sbjct: 430 GHQIPAWYDPDGNVFVAGSEEEALEKAAARHGRPVALRRDEDVLDTWFSSGLWPFSTLGW 489

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      A+++P    V G DI+ F    +          +P             KG K
Sbjct: 490 PEATP-ELARYYPTSTLVTGFDIIFFWVARMMMMGLHALGEVPFRTVYIHALVRDEKGAK 548

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+++++  G DALR+ L    A G+D       ++     + A  + N  
Sbjct: 549 MSKSKGNVVDPLDLVDRYGADALRFTLAAMAAQGRDIKLSVQRVEG--YRNFATKLWN-A 605

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M             A    +   L   +R + E+   +     + A A     V 
Sbjct: 606 ARFAEMNGCRIAPDFRPEAARETLNAWALGEAARAVAEVTAALDAFRFNDAAAAAYRFVW 665

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               D Y +  KP  L+                +I Q+ ILL  F+P L  +++
Sbjct: 666 NVFCDWYLELAKP-VLQGEAGPAQDETRATVAFLIDQICILLHPFMPFLTEELW 718



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 25/173 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA    + DVLARF RL G DVL+  GTD  G       +      
Sbjct: 41  MIPPPNVTGSLHMGHALNNTLQDVLARFERLRGKDVLWQPGTDHAGIATQMVVERRLAEH 100

Query: 70  K----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +           FV +                + +    D S + F  T ++        
Sbjct: 101 QQPDRRALGRAEFVRRVWAWKAESGGTIVNQLKRLGASCDWSRERF--TMDEGLSKAVVK 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           ++  +   G IY+      +  R +   +D EV +     +      PV   E
Sbjct: 159 VFVDLHAAGLIYRDKRLVNWDPRFQTAISDLEVQQVEVKGHLWHFAYPVVDQE 211


>gi|332076405|gb|EGI86868.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 883

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 133/353 (37%), Gaps = 38/353 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ +       ++
Sbjct: 412 GHQIPAWYNADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----- 368
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M     
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNGGL 588

Query: 369 ---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
              +  D    + T  A   +D  IL   +  + ++ EN            + + + E  
Sbjct: 589 TLDVAHDNVTKVATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVTGHILYNFIWEEF 648

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + Y +  K   L   N D       V +  + ++  LL + +P +  +IF  
Sbjct: 649 ANWYVELTK-EVLYSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQ 700



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 34  QKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   ++    + +S D      T ++   
Sbjct: 94  VEERLRGEGISRYDLGRESFLTKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++  +  KG IY+G +   +        +D EV  
Sbjct: 154 KAVRKVFVNLYKKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|284053184|ref|ZP_06383394.1| valyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291568160|dbj|BAI90432.1| valyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 908

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 139/385 (36%), Gaps = 56/385 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    D  L   ++        +R  +V       L+D  +SR+ + 
Sbjct: 355 PVEPLLSTQWFVKIRPLADGALVCLDNDHSPNFVPQRWQKVYRDWLVKLEDWCISRQLWW 414

Query: 216 ------W-----------------------------------GIKIPDDPQYIMYVWIDA 234
                 W                                   G+K+  DP  ++  W  +
Sbjct: 415 GHQIPAWYAVSETGGEITDDTPFIVARTAAEAQEKAIASFGEGVKLQQDPD-VLDTWFSS 473

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +        ++P +    G DI+ F    +       +  +P       
Sbjct: 474 GLWPFSTLGWPEKTA-DLQTYYPTNTLSTGFDIIFFWVARMTMMGGYFTDKMPFQTVYIH 532

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLK-KRV 350
              +   G+K+SKS GN IDP+ +I++ G DALRY L+RE I  G+D   + D  K +  
Sbjct: 533 GLILDENGKKMSKSAGNGIDPLLLIDKYGTDALRYTLMREVIGAGQDIRLEYDRSKDESP 592

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIREN 404
           + + +    N +  +   +L +  G  P             SD  ILS  ++ +++  + 
Sbjct: 593 SVEASRNFTNKLWNAARFVLMNLKGQTPAQLGTPNLEELELSDRWILSRFNQTVKQTCDY 652

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           M    +  A   +   +     D Y +  K + L+            V   ++  +  LL
Sbjct: 653 MNAYSLGEAAKGLYEFIWGDFCDWYIELAK-YRLQGDGGVSQKVAQQVLAYILEGILKLL 711

Query: 463 QAFVPKLANKIFDILFVADENRCFQ 487
             F+P +  +I+  L    E  C  
Sbjct: 712 HPFMPHITEEIWHTLTQTGEQDCLA 736



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D L R+HR+ G + L+  GTD     +    + 
Sbjct: 40  EPYCIMIPPPNVTGSLHMGHAFNNSLIDALIRYHRMRGYNTLYLPGTDHASIAVQTILER 99

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++     +    L +S D      T ++      
Sbjct: 100 QLREEGKTRYDLGRDKFLDRAWQWKQESGGKIVNQLRRLGVSCDWTRERFTLDEGLSKAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ + G IY+G Y   +    E+  +D EV              P+
Sbjct: 160 IEAFVRLYEDGLIYRGEYLVNWCPASESAVSDLEVENKEVNGKLWHFRYPL 210


>gi|325684336|gb|EGD26505.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 879

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 132/358 (36%), Gaps = 34/358 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    DK+L   +         +R    +      + D  +SR+   W
Sbjct: 352 VEPRLSTQWFVKMKPLADKVLENQKGEGRVNFVPDRFEGTLERWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D  Q ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VI++ G DALR+FL+   A G+D  +    +    N    N + N     +  + +
Sbjct: 531 DPMDVIDKYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN--FINKLWNASRFVIMNLPE 588

Query: 372 DYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           D      P    F  +D  I    +  ++E            A  ++ + +     D Y 
Sbjct: 589 DAKPAQKPDTSKFDLADAWIFDRLNHTVKETNRLFDEFQFGEAGREMCNFIWNDFCDWYI 648

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +  K   L   + +  +        ++ Q+  L+   +P +  K++  L +  E +  
Sbjct: 649 EISKV-ALYGDDAELKARKQANLTWILDQILRLIHPIMPFVTEKLW--LSMPHEGKSI 703



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  I D L R+ R+ G D L+  G D  G      
Sbjct: 33  KKAKPYSIVIPPPNVTGKLHLGHAWDTAIQDTLIRYKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     L +S D      T +K   
Sbjct: 93  VEARLREQGVSRYDLGRKKFVEKVWEWKDEYANIIKSQWQKLGLSLDYSRERFTLDKGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++ ++G IY+G Y   +  +     +D EV    D
Sbjct: 153 KAVRRVFVQLYNEGLIYRGEYIINWDPKLRTALSDIEVVHQDD 195


>gi|320538067|ref|ZP_08037966.1| valyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145076|gb|EFW36793.1| valyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 900

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 135/361 (37%), Gaps = 41/361 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
               H  ++    E +F ++    +K LS ++       P +  N   +     ++D  +
Sbjct: 359 CYRCHTTIEPYLSEQWFVKMKPLAEKALSAWQKGEITFYPKKWENT-YAHWMENIRDWCI 417

Query: 210 SRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYLT 240
           SR+   WG +I                               DP  ++  W  +     +
Sbjct: 418 SRQ-LWWGHRIPAWYCDDCKQMTVSREDLSACTHCGSKNIHQDPD-VLDTWFSSWLWPFS 475

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+    +  KA F+P    V   DI+ F    +       +  +P             
Sbjct: 476 TLGWPSKTEDLKA-FYPTTALVTAYDIIFFWVSRMIMAGLEFTGEVPFKDIYIHGLVRDR 534

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGN IDP+EV++  G DAL++ L    A G+D   D +  K  + +  AN I
Sbjct: 535 QGRKMSKSLGNGIDPLEVVKSYGADALKFTLAFMCAQGQDVLVDMESFK--LGSRFANKI 592

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  SR +   L+  +         TE D  I    ++     R+ ++    + A   + 
Sbjct: 593 WN-ASRYILGNLEGREIRPVKKSELTELDRWIYHALNKAADNSRKALEAYRFNEAAQVLY 651

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +A K    K  + +  +    V + V+ +   LL  F+P +  +I+  
Sbjct: 652 EFFWNNFCDWYVEATK-LSFKTNDENEMNRAASVLLAVLEESLRLLHPFLPFVTEEIYGR 710

Query: 477 L 477
           L
Sbjct: 711 L 711



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E   +           H+GH     + D++ R+HR+ G + L+  GTD  G       
Sbjct: 41  TKENYVVVIPPPNVTGVLHMGHGLNNTLQDIVVRYHRMKGDETLWVPGTDHAGIATQNVV 100

Query: 63  Q---------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +            +T + F+ +  +             + +    D S + F  T ++  
Sbjct: 101 ERQLKKEGRSRHDLTREEFLQRTWQVKDAHHAIIVNQLKKIGASADWSRERF--TLDEGL 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R ++  + ++G +Y+G Y   +  R      DDEV  
Sbjct: 159 SAAVREVFVTLYERGLLYRGNYLVNWCTRCGTALADDEVEY 199


>gi|237743264|ref|ZP_04573745.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433043|gb|EEO43255.1| valyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 887

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 156/399 (39%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++ ++   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KEQGFFIKTEHLHHAVGQCYR-CGTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDKHVFVAMDGAEAKEQAKKHYGHD 443

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFIEMTWDWKEKYGGIITRQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHVEKDGHLWQIKYPVKNSDE 211


>gi|34762740|ref|ZP_00143729.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887590|gb|EAA24670.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 887

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/426 (20%), Positives = 161/426 (37%), Gaps = 53/426 (12%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              +          D ++        L+++ ++   E    A GQ Y      ++     
Sbjct: 302 KIVQD--YPKYAGLDRFEARKKIVEDLKEQGFFIKTEHLHHAVGQCYR-CQTVIEPRVSP 358

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIP 221
            +F ++    +K L    +    ILP  R  ++       ++D  +SR+   WG  I   
Sbjct: 359 QWFVKMKPLAEKALEVVRNGEVKILPK-RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAW 416

Query: 222 DDPQ------------------------------YIMYVWIDALTNYLTTTGYLDNPDGS 251
             P                                ++  W  +     +T G+ +     
Sbjct: 417 YGPDRHVFVAMDEAEAKEQAKKHYGHDVELNQEEDVLDTWFSSALWPFSTMGWPEKTK-E 475

Query: 252 KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
              F+P    V G DI+ F    +          +P  K VF HG +  + G K+SKSLG
Sbjct: 476 LDLFYPTSTLVTGADIIFFWVARMIMFGMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLG 534

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N  DP+++I+E GVDA+R+ ++   + G+D  +  D L   +  + AN I N  +R V M
Sbjct: 535 NSPDPLDLIKEYGVDAIRFSMIYNTSQGQDVHFSTDLL--GMGRNFANKIWN-AARFVIM 591

Query: 369 ILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424
            L+ +D              D+ I+S  +   +++++ ++   +  A   V   +     
Sbjct: 592 NLEGFDVKSVDKTKLDYELVDKWIISRLNETAKDVKDCLEKFELDNAAKAVYEFLRGDFC 651

Query: 425 DRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           D Y +  K   L   + D+     T  Y+   V+ Q   LL  F+P +  +I+  + V  
Sbjct: 652 DWYVEIAKI-RLYNNDEDKKISKLTAQYMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDG 710

Query: 482 ENRCFQ 487
           +    Q
Sbjct: 711 DTIMLQ 716



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKNSDE 211


>gi|257791673|ref|YP_003182279.1| valyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317487862|ref|ZP_07946454.1| valyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325830576|ref|ZP_08163997.1| valine--tRNA ligase [Eggerthella sp. HGA1]
 gi|257475570|gb|ACV55890.1| valyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316912988|gb|EFV34505.1| valyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325487322|gb|EGC89764.1| valine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 893

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 136/382 (35%), Gaps = 42/382 (10%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    +               H  ++  E E +F  +   +       E       P  
Sbjct: 340 DELGLLEKVEDHDHSVMTCYRCHTKLEPWESEQWFVAVDGLKQDAARVVEDGSIQFHPE- 398

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---------------------------DP 224
           R  +V       LKD  +SR+   WG +IP                              
Sbjct: 399 RWKQVYLDWLDNLKDWCISRQ-LWWGHRIPMFYCDECGWEDASVEDVETCPVCGKPVRQD 457

Query: 225 QYIMYVWIDALTNYLTTTGYLD--NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           + ++  W  +      T G+ +         + +P  +    +DI+      +   +   
Sbjct: 458 EDVLDTWFSSQLWPFATMGWTEEGMDAPQMKQAYPTQVLSTARDIMGLWVARMVMASMYC 517

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  +P    +     +   G+ +SKS GN +DP+ ++E+ G D +R+ L+ ++   +D  
Sbjct: 518 TDRIPFEHVIIHPTVMAADGKPMSKSRGNGVDPLRLMEDYGADGMRFGLLMQVTGAQDLK 577

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +++  L+   N   AN I N  +R V+M L DY    P P   T +D  I S  + ++  
Sbjct: 578 FNEAKLESSRN--FANKIRN-AARFVTMNLDDYVPGAPEP--VTPADRWIFSRLAGLVAR 632

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E   N        ++ S       D Y +  K       +P+  +      V V+ Q 
Sbjct: 633 VDEAYGNFEFGEITRELFSFFWNEFCDWYIEFSKARL--NGSPEDRAACQRNLVFVLDQA 690

Query: 459 AILLQAFVPKLANKIFDILFVA 480
             LL   +P +  +I+  L + 
Sbjct: 691 LRLLHPIMPFVTEEIYQQLPID 712



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 45/175 (25%), Gaps = 18/175 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    I D   R  R+ G    +  GTD  G         
Sbjct: 46  QPYTIVIPPPNITGVLHMGHALNDTIQDTCIRRARMQGRPTRWILGTDHAGISTQTKVDK 105

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    +  S D  D   T E  +    
Sbjct: 106 KLADQGISRLEIGREAFIEACYDWYKEYGTTIVNQIKGMGCSCDYADEHFTLEPAYVKAV 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           R L+        IYKG     +        +DDE     +  +      P+   E
Sbjct: 166 RKLFVDWYHDDLIYKGKRIVNWCPHCTTSISDDEAEYVDEAGHLWYLRYPLTEPE 220


>gi|325087332|gb|EGC40642.1| methionyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 512

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 86/481 (17%), Positives = 178/481 (37%), Gaps = 56/481 (11%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                    T +   D+      ++    DI +D F RTT     D  + +++K+ + G 
Sbjct: 10  EAKGLIEKCTPQELCDKYHAIHAEIYQRFDIGFDIFGRTTTPLQTDITQDIFRKLYNNGF 69

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL- 177
           + +   +          Y ++  Y  A G   +     ++ ++ +    ++  +      
Sbjct: 70  LKERMTTQ--------LYCEEHHYADARGDQCDMCGQLLEPLQLKNPRCKIDGFAPITKD 121

Query: 178 -----------------SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--I 218
                             + ++      P   ++  ++++K GL+  S++R    WG  +
Sbjct: 122 TKHIFLELDKLQPEVEDYFQKASTNGAWPNNGKSITLAWLKEGLQPRSITRD-MKWGTQV 180

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL---HVIGKDILRFHAIYW 275
             P     ++Y W DA   Y++ T         K    P D+     IGKD + FH++ +
Sbjct: 181 PFPGYEDKVIYSWFDACIGYVSITA-KYTDQWEKWWRNPEDVQLYQFIGKDNVVFHSVIF 239

Query: 276 PAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG-VDALRYFLVRE 332
           PA  +    P  K   + +  ++ ++G K SKS G  +      +  G  D  RY+L+  
Sbjct: 240 PASQIGTRGPWTKVHHLSTTDYLTYEGGKFSKSRGIGVFGDSAQQTGGSADVWRYYLLSR 299

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTE-SDESI 390
                D  +  D      N+ L N +GN  SR +  +   + + ++P    + E S E+ 
Sbjct: 300 RPETGDTEFSWDSFISANNSILLNNLGNFASRVLKFVNSRFYNNIVPNWTRYHEPSFETW 359

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLY 449
               +R+L +  E +    +   LA  + +  + + +    K   +L ++ P + + V+ 
Sbjct: 360 KEEINRLLTKYVEVLNTVKLRAGLATALHISQQGNLFLQTNKLNDKLHESEPAKCTAVIS 419

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           +T           +         I   L V             +KP   + K+ + +F R
Sbjct: 420 LT-----------KPL-----KSICTQLRVEPLAIPDHWSADSIKPSHEIGKS-EHLFRR 462

Query: 510 F 510
            
Sbjct: 463 I 463


>gi|257465980|ref|ZP_05630291.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917136|ref|ZP_07913376.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691011|gb|EFS27846.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 887

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 144/385 (37%), Gaps = 11/385 (2%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + +   + G  Y+        +  + +     + + A     N Q   +    E+ Y+ 
Sbjct: 334 KIEELNHNVGQCYRCSTVVEPRVSKQWFVKTKPLAEKAIEVVRNGQVKIMPKRMEKIYYS 393

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
            +   +D  +S        I      +E +       +    ++  +   +++  +   +
Sbjct: 394 WMENIRDWCISRQLWWGHRIPAWYGPDEHLFVAMDEAEAKEQAKLHYGKEVELRQEED-V 452

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +        ++P    V G DI+ F    +         ++P
Sbjct: 453 LDTWFSSALWPFSTMGWPEKTK-ELELYYPTSTLVTGADIIFFWVARMIMFGLYEMKDIP 511

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                F        G K+SKSLGN  +P+++I++ G DA+R+ ++   + G+D  + +  
Sbjct: 512 FHNVFFHGIVRDDLGRKMSKSLGNSPNPLDLIDQYGADAIRFSMIYNTSQGQDVRFSEKL 571

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRE 403
           L+  +  + AN I N  SR V M L+D+D          +   DE I+S      + +  
Sbjct: 572 LE--MGRNFANKIWN-ASRFVMMNLEDFDINTFDVKEVKYELVDEWIISRLQETAKAVET 628

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++N  +  A   V   +     D Y +  K       +     T  YV   ++     L
Sbjct: 629 RLENFQLDDAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLWSMLESGLRL 688

Query: 462 LQAFVPKLANKIFDILFVADENRCF 486
           L  F+P ++ +I+  +   D     
Sbjct: 689 LHPFMPYISEEIWQSIKKEDAGETI 713



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GH     I D L R+ R+ G + L+  G D  G      
Sbjct: 33  EGKENYSIVIPPPNVTGILHMGHVLNNSIQDTLVRYQRMTGKNTLWLPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + +++          L  S  +D    T ++   
Sbjct: 93  VERKLKEEGLTKEDLGREEFLKRTWEWKEEHGGIITTQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  EE
Sbjct: 153 HAVRKIFVDLYKDGLIYQGEYMVNWCPSCGTALADDEVDHEESHGHLWHLKYPVKDSEE 211


>gi|42522066|ref|NP_967446.1| hypothetical protein Bd0458 [Bdellovibrio bacteriovorus HD100]
 gi|81618454|sp|Q6MQK8|SYV_BDEBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39574597|emb|CAE78439.1| valS [Bdellovibrio bacteriovorus HD100]
          Length = 894

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 141/382 (36%), Gaps = 45/382 (11%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             + E        + +     V+    E +F ++ A         E+      P     +
Sbjct: 334 LLEKEEPHVHSVGHCSRSGAVVEPYLSEQWFVKMEALAVPAKRVAENGTIRFEPESWT-K 392

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYI 227
           V     + ++D  +SR+   WG +IP                                 +
Sbjct: 393 VYLHWLNNIEDWCISRQ-LWWGHRIPVWYCEDCNHQTVAETDVTACEKCGSTKLHQDDDV 451

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +  +  K  F+P    V G DI+ F    +         ++P
Sbjct: 452 LDTWFSSALWPFSTMGWPNETETLKT-FYPTSYLVTGHDIIFFWVARMIMMGLEFQRDVP 510

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                        +G K+SKSLGN IDP+E+IE+ G DALR+     +  GKD  + +  
Sbjct: 511 FRTVYIHGLVRDSQGRKMSKSLGNSIDPVEMIEKHGADALRFTFAAHLYSGKDFKFSEQR 570

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYD------GMIPTPGAFTESDESILSVCSRVLQ 399
           L+     +  N + N    ++S  L D+         +P     +  D+ I++    V +
Sbjct: 571 LEG--YRNFMNKVWNAARFALS-NLSDFKAPTEGVKALPNKVHISVFDQWIITKLEEVTK 627

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            + E M+ +    A   +   +     D Y +  KP  L   N +  +    V  +V+ +
Sbjct: 628 TVEEAMEQERFSDASTALYQFIWNQFCDWYIEFTKP-ILNGNNAEEKAATQLVIAQVLNR 686

Query: 458 LAILLQAFVPKLANKIFDILFV 479
           +  LL  F P ++ +I+  L +
Sbjct: 687 IMRLLHPFAPFISEEIYQKLPI 708



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 22/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
             +    I           H+GHA +  I D++ R+ R++G + ++  GTD  G      
Sbjct: 36  STKPPFSIILPPPNVTGFLHMGHALDHTIQDMMIRWKRMNGYNTMWLPGTDHAGIATQSV 95

Query: 60  -----------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K  + ++     R + D  D  +D  + T ++ 
Sbjct: 96  VERELKKDGVTRHDLGREKFVEKVWDWKHQYGNRIYGQMRRLGDSCD--WDRAVFTLDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                R ++  +  KG IY+G     +S   E   +D EV              P++
Sbjct: 154 VSKAVRKVFVSLHKKGLIYRGQRLVNWSGPLETAISDLEVEHKQIKGSLYHVKYPLE 210


>gi|116747642|ref|YP_844329.1| valyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696706|gb|ABK15894.1| valyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 892

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 79/396 (19%), Positives = 143/396 (36%), Gaps = 39/396 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L    +    E Y    G  Y    + V+ M+   +F       
Sbjct: 312 YAGMDRYECRRKILKELEHGGFLVKVENYHHRVGHCYR-CKSVVEPMQSLQWFVSTRPLA 370

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           D+ +         I+P +   +        L+D  +SR+   WG +IP            
Sbjct: 371 DRAMKAVRDGSTAIVPAKW-EKDYFIWLENLEDWCVSRQ-IWWGHRIPAWYCRDCGELIV 428

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                           +    ++  W  +     +T G+ D       KF+P  + V   
Sbjct: 429 AREEPRECSMCKGTRLEQDSDVLDTWFSSGLWPFSTLGWPDRTP-ELDKFYPTSVLVTAF 487

Query: 266 DILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVD 323
           DIL F         + A   +P ++V+ H  +   +G+K+SKS GNVIDP+ ++E  G D
Sbjct: 488 DILFFWVARMMMMGIHAMHEVPFREVYIHALVRDAQGQKMSKSKGNVIDPLVMMERYGTD 547

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           A R+ L      G+D    ++ ++        N I N     +  +  +           
Sbjct: 548 AFRFTLAAFAVQGRDVKLSEERIEG--YKHFVNKIWNAARLLLMNLQGEASLEEIPSKPV 605

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
                 ILS   RV+ E+   ++N   ++    +   +     D Y +  KP +L   + 
Sbjct: 606 QLMHRWILSRLQRVVGEVDSALENYHFNQYANVLYQFLWREYCDWYLEMIKP-DLYGEDE 664

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   ++V V+ Q+ +LL   +P +  +I+  L
Sbjct: 665 AAGRLAKSISVRVLEQILVLLHPVMPFVTEEIYQKL 700



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
             +    I         Q H+GHA    + D+L+R+ RL G +VL+  GTD  G      
Sbjct: 35  SSKPPFCIVIPPPNVTGQLHMGHALNNTLQDILSRYKRLKGFEVLWLPGTDHAGIATQNV 94

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A Q    T K  +        + +    D   + F  T ++ 
Sbjct: 95  VERQLAAEGLNRYELGRDAFQERVWTWKAKYGGIIINQLKRLGASCDWERERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                R ++ K+ ++G IY+G     +  R      + EV
Sbjct: 153 LSRAVREVFVKLYEEGLIYRGKRMINWCPRCMTALANIEV 192


>gi|302534400|ref|ZP_07286742.1| valyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443295|gb|EFL15111.1| valyl-tRNA synthetase [Streptomyces sp. C]
          Length = 873

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 134/362 (37%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P+E   +        L D  
Sbjct: 353 HCSRCSTTVEPRLSLQWWVKVETLAKAAGDAVRDGRVAIHPVE-MEKRYFDWVDNLNDWC 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPDGEVVCVGPDEEAPSGGGWTQDTDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +      AKF+  D+ V G DI+ F     + +  + +   +P      +      +G+
Sbjct: 471 PEKTP-DLAKFYSTDVLVTGHDIIFFWVARMMMFGLYAMDGEVPFKTIALTGLVRDERGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ +++ G DA+R+ L +    G D    +D ++    +  AN I N 
Sbjct: 530 KMSKSFGNVVDPLDWMDKYGSDAVRFTLAKGANPGTDVPIGEDWVQAS--SKFANKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  ++ + ++    ++    +    +    
Sbjct: 587 ATRFALMNGATIEGELPPAEQLSATDRWILSRLNKTVAQVDGYYEDFQFSKLSEALYHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K          + S+   V  EVI  +  LL   VP +   ++  L  
Sbjct: 647 WDEVFDWYVELSKTTFFAGGEQAKVSS--RVLGEVIDVMLRLLHPVVPFVTETLWTTLTG 704

Query: 480 AD 481
            +
Sbjct: 705 GE 706



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA++  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SEKPAYTIVIPPPNVTGSLHLGHAFQHTLMDALTRRKRMQGFESLWLPGMDHAGIATQNK 103

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + +  +     R + D +D S + F  T ++ 
Sbjct: 104 VEQQLAEEGKSRHDLGREEFVERVWQWKEEYGGKILGQMRRLGDGVDWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 162 LSKAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQED 206


>gi|325283253|ref|YP_004255794.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315062|gb|ADY26177.1| Valyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 895

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/390 (21%), Positives = 150/390 (38%), Gaps = 58/390 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +  E +F  +    +++L   +     + P  R  ++       ++D ++SR+   
Sbjct: 367 PVEPIISEQWFVNVKPMAERVLKGLDDGDMRLTPA-RHEKINRDWLENIRDWNISRQ-LW 424

Query: 216 WG--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG  I    D +  +YV                              W  +     +T G
Sbjct: 425 WGHQIPAWYDEEGNVYVPDRDNPDLDCDQDPRYAHLKLTRDPDVFDTWFSSNLWPFSTLG 484

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D       KF+P  + V G DIL F    +   A+  +   P    +    ++  KG+
Sbjct: 485 WPDTDAPDYRKFYPTSVLVTGYDILFFWVARMQMAAYEHTGQAPFKDIMLHGLYLDSKGQ 544

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP+E+ ++ GVDA R+        G+D  +D    ++    + AN + N 
Sbjct: 545 KMSKSKGNGIDPLELFDQYGVDACRFAFTFLSTGGQDIRHDDRRFEQ--GRNFANKLWNA 602

Query: 362 VSRSVSMILKDYDGMIPTPGAFTE---------SDESILSVCSRVLQEIRENMQNQLIHR 412
              ++  +   Y       GA  E         +D  I+S  S V  E    +    I  
Sbjct: 603 TRFALLRLDGVYLPQEDPAGALRELAASGKLSLADRWIISRLSAVSAEASAQLDELDIGA 662

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A+  + +   +   D Y +A KP  L+  +         V   V+ Q+  LL  F+P + 
Sbjct: 663 AIRTLYAFAWDEFCDWYIEASKP-ALEAGDVQ----TGRVLKAVLAQILGLLHPFMPFIT 717

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           ++++  L    +     +L +  K    LH
Sbjct: 718 SELYAALGYEGQL----ALTEWPKADDTLH 743



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA +  + D L R+ R+ G + L+  G D  G       +
Sbjct: 41  KPPFTIVIPPPNVTGNLHLGHALDNTLIDTLTRYKRMAGFEALYLPGMDHAGISTQVMVE 100

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   + +Q      +    L +S D      T ++     
Sbjct: 101 RELKAQGTDRHELGREKFLEKVWEWKEQYGGAILNQLTRLGVSADWTRERFTMDEGLSRA 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            R  +  +   G  Y+G     +    +   ++ E+
Sbjct: 161 VRKQFVDLYHDGLAYRGERMVNWDPVSQTTLSELEI 196


>gi|209964474|ref|YP_002297389.1| valyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957940|gb|ACI98576.1| valyl-tRNA synthetase ValS [Rhodospirillum centenum SW]
          Length = 898

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 129/347 (37%), Gaps = 13/347 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P QW  E  YF  +   Q   +S        I         I   ++     + +   F 
Sbjct: 402 PRQW--ENTYFEWMRNIQPWCISRQLWWGHQIPAWYGPEGSIFVAETEEDARAQAVARFG 459

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
            G++I  D   ++  W  +     +T G+ +       +++P D+ V G DI+ F    +
Sbjct: 460 EGVEITRDAD-VLDTWFSSALWPFSTLGWPEKTP-ELDRYYPGDVLVTGFDIIFFWVARM 517

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                    ++P             KG+K+SKS GN+IDP+ V+++ G DALR+ L    
Sbjct: 518 MMMGLHFMGDVPFRTVYIHALVRDEKGQKMSKSKGNIIDPLTVVDKYGADALRFTLAAMA 577

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           A G+D       ++     + A  + N    +    +    G  P     T  ++ ++  
Sbjct: 578 AQGRDIKLAVSRVEG--YRNFATKLWNAARYAQMNEVAPAPGFDPAAVTLT-VNKWVIGA 634

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
             +    + + ++    + A   +         D Y +  KP  L   +    +     T
Sbjct: 635 AQQAAARVTDALEGYKFNEAAGAIYQFAWNTFCDWYLEFTKP-ILNGEDEAAKAETRATT 693

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
             V+  +  LL   +P L  ++ + L   DE     +  +  +PG +
Sbjct: 694 AWVLDHILHLLHPIMPFLTEELNEKLGGKDELLISAAWPEP-QPGLV 739



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 52/178 (29%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA    + DVL RFHR+ G D L+  G D  G      
Sbjct: 31  SNQRPYTIMMPPPNVTGSLHMGHALTFTLQDVLVRFHRMRGQDALWQPGQDHAGIATQMV 90

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++          L  S D      T ++  +
Sbjct: 91  VERNLAKEGVSRLDLGREKFVEKVWEWKAESGGTITHQLRHLGASADWARERFTLDEGLN 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R ++  +  +G IY+      +  +     +D EV              P+   E
Sbjct: 151 RAVRKVFVDLYRQGLIYRDKRLVNWDPKLHTAISDLEVEPKPVKGNLWHFRYPIDGEE 208


>gi|78222176|ref|YP_383923.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193431|gb|ABB31198.1| valyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 887

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 81/362 (22%), Positives = 141/362 (38%), Gaps = 41/362 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ ++    ++ L+  +     I+P +  N    +++  ++D  +
Sbjct: 348 CYRCKTVVEPYLSLQWYVKVGPLAEEALAAVKDGRTRIVPQQWENTYYDWME-NIRDWCI 406

Query: 210 SRKTFDWGIKIP--------------DDPQY--------------IMYVWIDALTNYLTT 241
           SR+   WG +IP               DP                ++  W  +     +T
Sbjct: 407 SRQ-IWWGHRIPAWYCDHCGETTVAKVDPTKCSKCGSDEIRQETDVLDTWFSSALWPFST 465

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D     K  F+P    V G DIL F    +          +P             +
Sbjct: 466 LGWPDQTSELKT-FYPTSCLVTGFDILFFWVARMMMMGLHFMGEVPFRDVYIHALVRDAQ 524

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNVIDP+ VI++ G DA R+ L    A G+D    ++ +      + AN I 
Sbjct: 525 GQKMSKSKGNVIDPLVVIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFANKIW 582

Query: 360 NLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N  SR   M L+ +D     P    F+ +D  IL   +    +++E ++    + A   +
Sbjct: 583 N-ASRFALMNLEGFDPDAVDPAGLEFSNADRWILYRFNAAAADVQEALEAYRYNDAATAL 641

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +  K  +L + +  R  T  YV   V+  L  LL  F+P +  +I+ 
Sbjct: 642 YRFTWSEFCDWYIELVKD-DLYRGDETRQRTARYVLWLVLEHLLRLLHPFMPFITEEIWQ 700

Query: 476 IL 477
            L
Sbjct: 701 AL 702



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 22/177 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++    I           H+GHA    + DVL R+ R+ G +VL+  GTD  G     
Sbjct: 34  VSDKPSYSIVIPPPNVTGALHMGHALNNTLQDVLCRWKRMSGHNVLWMPGTDHAGIATQN 93

Query: 61  -------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                              A        K     Q     + +    D   + F  T ++
Sbjct: 94  VVERQLAAEGKSRHELGRDAFIERVWKWKAESGGQIIGQLKRLGASCDWERERF--TMDE 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 R ++ ++ ++G IY+      +  R     +D EV              PV
Sbjct: 152 GLSRAVREVFVRLYEEGLIYRDNRLINWCPRCHTALSDIEVEHEEKAGNLWHLRYPV 208


>gi|95930108|ref|ZP_01312847.1| valyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133802|gb|EAT15462.1| valyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 886

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 136/373 (36%), Gaps = 17/373 (4%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            ++  G+ Y+        +  + Y +   + K A     + Q   V    E+ Y+  +  
Sbjct: 339 HLNSVGECYRCKTVIEPYMSLQWYVDVQPLAKEAIKAVESGQTRIVPAQWEKTYYEWMYN 398

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            QD  +S         +P    ++      S       ++               ++  W
Sbjct: 399 IQDWCISRQIWWGHR-IPAWFCDDCGEITVSRDDATCCAKCQ----STNIHQETDVLDTW 453

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
             +     +T G+ +  D    KF+P    + G DIL F    +          +P    
Sbjct: 454 FSSGLWPFSTMGWPEKTDALN-KFYPTSCLITGFDILFFWVARMMMMGLKFMGEVPFKDV 512

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                    +G+K+SKS GNVIDP+ VI+E G DA R+ L    A G+D     + +   
Sbjct: 513 YIHALVRDAQGQKMSKSKGNVIDPLTVIDEFGTDAFRFTLTAFAAQGRDVKLSTERI--G 570

Query: 350 VNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
              +  N + N  SR   M L+ +   D       + + +D  IL+  + V +E  + ++
Sbjct: 571 GYRNFCNKLWN-ASRFTLMNLEGFEPVDTPNWDELSLSMADRWILTRLTEVEKEANKALE 629

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A + + +       D Y +  K   L   +     +   V   V+ +L  LL  
Sbjct: 630 EYRFNEAASTLYTFTWHEFCDWYIELIK-GALYGDDAAAKLSAQTVVYTVLERLLRLLHP 688

Query: 465 FVPKLANKIFDIL 477
             P +  +I+  L
Sbjct: 689 ITPFITEEIWQNL 701



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+LAR+ R+ G +VL+  GTD  G      
Sbjct: 34  SDKPPYSIVIPPPNVTGVLHMGHALNNTMQDILARWKRMTGHEVLWMPGTDHAGIATQNV 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    +                   + +++     +    L  S D      T +    
Sbjct: 94  VEKQLASEDKDRHDVGRDAFIERVWQWREESGGQIINQLKRLGASCDWQRERFTMDDGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  + ++G IY+      +  R     +D EV              PV+  ++
Sbjct: 154 KAVREVFVSLYEEGLIYRDNRLINWCPRCHTALSDLEVEHDDKKGNLWHLRYPVKGTDQ 212


>gi|148263856|ref|YP_001230562.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146397356|gb|ABQ25989.1| valyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 886

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 139/365 (38%), Gaps = 47/365 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ ++    ++ L+        I+P +  N    +++  ++D  +
Sbjct: 347 CYRCKTVVEPYMSLQWYVKVGPLAEEALAAVRDGKTRIVPQQWENTYYEWME-NIRDWCI 405

Query: 210 SRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTT 242
           SR+ +                             G +       ++  W  +     +T 
Sbjct: 406 SRQIWWGHRIPAWYCDHCGEITVAKVDPTACAKCGSEEIRQETDVLDTWFSSALWPFSTM 465

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298
           G+ D      A F+P    V G DIL F    W A ++   L   ++V      +H    
Sbjct: 466 GWPDKTQ-ELASFYPTSCLVTGFDILFF----WVARMMMMGLHFMEEVPFRDVYIHALVR 520

Query: 299 --KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K+SKS GNVIDP+ VIE  G DA R+ L    A G+D    ++ +      + AN
Sbjct: 521 DAQGQKMSKSKGNVIDPLTVIEAYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFAN 578

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N  SR   M L+ +D           + +D  IL   +    E+ E +     + A 
Sbjct: 579 KIWN-ASRFAMMNLEGFDPDAVDADSLELSNADRWILFRLNETAGEVDEALAAYRFNDAA 637

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A +         D Y +  K  +L K +  R  T  YV   V+  L  LL  F+P +  +
Sbjct: 638 AALYRFTWSEFCDWYIELVKD-DLYKGDSRRQVTARYVLWLVLEHLLRLLHPFMPFITEE 696

Query: 473 IFDIL 477
           I+  L
Sbjct: 697 IWQTL 701



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 22/181 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G     
Sbjct: 34  VSAKPSYSIVIPPPNITGVLHMGHALNNTLQDILCRWKRMSGFNVLWMPGTDHAGIATQN 93

Query: 61  AAQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +                               Q     + +    D   + F  T ++
Sbjct: 94  VVERQLSAEGKDRHDVGREAFIERVWQWKAESGGQIIGQLKRLGASCDWERERF--TMDE 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                 R ++ ++ D+G IY+      +  R     +D EV       +      PV   
Sbjct: 152 GLSRAVREVFVRLYDEGLIYRDNRLINWCPRCHTALSDIEVEHEEKAGHLWHLRYPVVGT 211

Query: 161 E 161
           E
Sbjct: 212 E 212


>gi|308125798|ref|ZP_07663527.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308113929|gb|EFO51469.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 330

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/306 (25%), Positives = 127/306 (41%), Gaps = 35/306 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   AQ 
Sbjct: 11  RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 70

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  +   S   +      DIS+D++  T  + + +    ++ ++   G I     
Sbjct: 71  MGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTI 130

Query: 125 SGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ--------------W 159
           S  +    E +  D            E   G +       ++P +               
Sbjct: 131 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVM 190

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + E +FF L  ++  L  +  S     L  E  N++  + +SGL+   +SR    +G +
Sbjct: 191 KDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFE 247

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPAD-----LHVIGKDILRFHA 272
           IP +     YVW+DA   Y+ +   L N        ++W  D      H IGKDI+ FH+
Sbjct: 248 IPGEKDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHS 307

Query: 273 IYWPAF 278
           ++WPA 
Sbjct: 308 LFWPAM 313


>gi|331701260|ref|YP_004398219.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128603|gb|AEB73156.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 886

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 76/350 (21%), Positives = 137/350 (39%), Gaps = 36/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++    ++ +   +++ +     +R           + D  +SR+   W
Sbjct: 361 VEARLSTQWFVKMKPLAEQAIKNQDTNNKVNFFPDRFEGTFEQWMENVHDWVISRQ-LWW 419

Query: 217 GIKIP------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +IP                         DP  ++  W  +     +T G+ D+ +  K
Sbjct: 420 GHQIPAWYNKQTGEIYVGMEAPKDAENWEQDPD-VLDTWFSSALWPFSTMGWPDDTEDMK 478

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D  V G DI+ F    + + +   +   P    +        +G K+SKSLGN 
Sbjct: 479 -RYFPTDTLVTGYDIIFFWVSRMIFQSLEFTHERPFKDVLLHGLIRDSQGRKMSKSLGNG 537

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI++ G DALR+FL      G+D  +  D +    N    N I N  SR V M L
Sbjct: 538 IDPMDVIDKYGADALRWFLSIGGTPGQDLKFSYDKMDSAWN--FINKIWN-ASRYVIMNL 594

Query: 371 KDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
              D   +P    +  SD+ ILS  +  +  + +  +      A   +   +     D Y
Sbjct: 595 DGIDKPELPDKSEWQLSDKWILSRLNATVNHVSDLFEKYNFGEADRYLYDFIWNDFCDWY 654

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   L   +         +   V+ Q   LLQ  +P +   I+ ++
Sbjct: 655 IEMSK-EALNSDDEKLKKNTQNILAYVLDQTLRLLQPIMPFVTEYIWQMM 703



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G      
Sbjct: 37  KKAKPFSIVLPPPNVTGKLHLGHAWDTTLQDMIIRRKRMQGYDTLWLPGMDHAGIATQAK 96

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D  +R  ++    L +S D      T +K   
Sbjct: 97  VEAKLRKQGISRYDLGREKFVEKVWEWKDDFARTIKEQWAKLGLSLDYSRERFTLDKGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + +KG IY+G Y   +  +     +D EV    D
Sbjct: 157 KAVRKVFVTLYNKGLIYRGEYIINWDPQARTALSDIEVIHKDD 199


>gi|320010826|gb|ADW05676.1| valyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 884

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 130/358 (36%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E   +        L D  
Sbjct: 364 HCSRCRTTVEPRLSLQWWVKVETLAKAAGDAVRDGRVAIHPKE-MEKRYFDWVDNLNDWC 422

Query: 209 LSRKTFDWG--IKIPDDP----------------------QYIMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 423 ISRQ-LWWGHRIPVWYGPAGEVVCVGPDEQPPTGEGWTQDNDVLDTWFSSGLWPFSTLGW 481

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +     K KF+P D+ + G DI+ F     + +  +++    P      +      +G+
Sbjct: 482 PEETPDLK-KFYPTDVLLTGHDIIFFWVARMMMFGLYVMDGEAPFKTIALTGLVRDERGK 540

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ ++  G DA+R+ L +    G D    +D ++   N   AN I N 
Sbjct: 541 KMSKSFGNVVDPLDWMDTYGSDAVRFTLAKGANPGTDVPIGEDWVQASRN--FANKIWN- 597

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  ++ + +     ++    +    +    
Sbjct: 598 ATRFAMMNGATVEGELPPVEQLSATDRWILSRLNKTVADADAFYEDFQFAKLSDALYHFA 657

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K          + S    V  EV+     LL   VP +  +++  L
Sbjct: 658 WDEVFDWYVELSKTTFFAGGEQAKVSA--RVLGEVLDVTLRLLHPIVPFVTEQLWTTL 713



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA++  + D L R  R+ G + L+  G D  G      
Sbjct: 55  SEKPPYTIVIPPPNVTGSLHLGHAFQHTLMDALTRRKRMQGYEALWLPGMDHAGIATQNK 114

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + +  +     R + D +D S + F  T ++ 
Sbjct: 115 VEQQLGEEGKSRHDLGREAFVERVWQWKEEYGGKILGQMRRLGDGVDWSRERF--TMDEG 172

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 173 LSAAVQTVFKKMYDDELIYRAERIINWCPRCLTAISDIEVDYQDD 217


>gi|1000351|gb|AAC44094.1| methionyl-tRNA synthetase [Mycoplasma pulmonis]
          Length = 281

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 4/276 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ +YI+T I YP+   H+GH Y   IA VL  + ++ G +  F+TG+DEHGQKI   AQ
Sbjct: 2   KKTIYITTPIYYPSGDLHLGHIYSTNIAWVLRNYKKIQGYETFFSTGSDEHGQKIFNKAQ 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
              + T+ +VD+ +  F D     +I YD F RTT K H +  R ++ K+ +K  IY   
Sbjct: 62  ELKLETQDYVDRQANKFIDFWKKANIDYDFFARTTNKEHKEVVREIFHKLKEKNIIYLDK 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
           Y G YS+ DE +  + +  K  +  ++   ++ +  +EEE YFF L+ + D +  + +  
Sbjct: 122 YVGLYSVSDEEFLTETQALKKDNKFFHPVSNHELIKIEEESYFFNLNLFIDWIKEFLDQD 181

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                         +F+  GL++LS++R   DWG+KI    ++++YVW+DAL  YLT  G
Sbjct: 182 IISSK-AIVNELKSNFINKGLENLSVTRIKLDWGMKIDQSSKHVIYVWLDALFQYLTNLG 240

Query: 244 YLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWP 276
           Y         KFW      +HV+GK+I RFH IYWP
Sbjct: 241 YGSKNQSLYEKFWKNGDERVHVVGKEITRFHCIYWP 276


>gi|19705307|ref|NP_602802.1| valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81485170|sp|Q8RHK3|SYV_FUSNN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19713276|gb|AAL94101.1| Valyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 887

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 86/399 (21%), Positives = 155/399 (38%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + +  +   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KAQDLFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P +  V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTNTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M LK +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-ATRFVIMNLKGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|254382766|ref|ZP_04998123.1| valyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341668|gb|EDX22634.1| valyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 792

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 131/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 272 HCSRCRTTIEPRLSLQWWVKVETLAKAAGDAVRDGRVAIHPQE-MEKRYFDWVDNLNDWC 330

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 331 ISRQ-LWWGHRIPVWYGPDGEVVCVGPDDEVPTGEGWTQDTDVLDTWFSSGLWPFSTLGW 389

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
                   AKF+  D+ V G DI+ F     + +  + +   +P      +      +G+
Sbjct: 390 PRKTP-DLAKFYSTDVLVTGHDIIFFWVARMMMFGLYAMDGEVPFKTIALTGLVRDERGK 448

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ +++ G DA+R+ L +    G D    +D ++   N   AN I N 
Sbjct: 449 KMSKSFGNVVDPLDWMDKYGSDAVRFTLAKGANPGTDVPIGEDWVQASRN--FANKIWN- 505

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P P   + +D  ILS  ++ + ++    ++    +    +    
Sbjct: 506 ATRFALMNGATVEGELPAPEEMSATDRWILSRLNKTVSQVDSYYEDFQFSKLSEALYHFA 565

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K          + S    V  EV+     LL   VP +   ++  L  
Sbjct: 566 WDEVFDWYVELSKTTFFAGGEGAKVS--GRVLGEVLDTTLRLLHPVVPFVTETLWTTLTG 623

Query: 480 AD 481
            +
Sbjct: 624 GE 625



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 22/127 (17%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAG--------------------VTTKVFVDQNSRN 79
           + G + L+  G D  G       +                          + +  +    
Sbjct: 1   MQGYEALWLPGMDHAGIATQNKVEQQLAEEGKSRHDLGREEFVERVWQWKEEYGGKILGQ 60

Query: 80  FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
            R + D +D S + F  T ++      + ++KK+ D   IY+      +  R     +D 
Sbjct: 61  MRRLGDGVDWSRERF--TMDEGLSKAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDI 118

Query: 140 EVYKGAD 146
           EV    D
Sbjct: 119 EVEYQED 125


>gi|328950389|ref|YP_004367724.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450713|gb|AEB11614.1| Valyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 867

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 149/379 (39%), Gaps = 51/379 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +    P++      ++  +    +K+++  E      +P   R   + +++  ++D ++
Sbjct: 346 CDRCGTPIEPALFPQWWLSMKPLAEKVIAGIERGEIQFVPERWRKVNLDWLR-NIRDWNI 404

Query: 210 SRKTFDWGIKI-------------------PDDPQ--------------YIMYVWIDALT 236
           SR+   WG +I                    +DPQ               +   W  +  
Sbjct: 405 SRQ-LWWGHQIPAWHCKACGEITVPPVERYMEDPQACAHCGSPEIERDPDVFDTWFSSAL 463

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHG 294
             L+T G+ +  +  KA F+P D+ V G DIL           +      P    +    
Sbjct: 464 WPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFKGERPFKTVLLHGL 522

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +  KG+K+SKS GNV+DP+E++E  G DALR+ LV     G+D  +D      R   ++
Sbjct: 523 VLDEKGQKMSKSKGNVVDPLELVEAYGADALRFALVHLATGGQDIRFD------RRWVEM 576

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +   +L + +G        T +D  + +  ++ ++EI    +   +  A 
Sbjct: 577 GRNFANKLWNAARFVLMNREGFEAKRDELTLADRWMQARLAQGVREITALYERYDLALAA 636

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +V  LV     D Y +A KP  L++ N    +  L      +  L  LL   +P + ++
Sbjct: 637 REVYQLVWSEFCDWYIEAAKP-ALREGN----AATLKGLENALETLLKLLHPLMPFVTSE 691

Query: 473 IFDILFVADENRCFQSLDQ 491
           I+  L    +        +
Sbjct: 692 IYAALKGEGQELALAPWPE 710



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 48/162 (29%), Gaps = 18/162 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA +  + D L R+ R+ G + L+  GTD  G      
Sbjct: 33  SGKKPFVIFMPPPNVTGNLHMGHALDNALQDALIRYKRMRGYEALWLPGTDHAGIATQVV 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + + +          L  S D      T ++   
Sbjct: 93  VERLLAKEGTTRHALGREAFLKRVWEWKETSGGAIIRQLKRLGASPDWSREAFTMDEARS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
              R  + +   +G  Y+      +  R E   +D EV    
Sbjct: 153 RAVRYAFVRYYHEGLAYRAGRIVNWCPRCETTLSDLEVNTEH 194


>gi|145223217|ref|YP_001133895.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315443675|ref|YP_004076554.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215703|gb|ABP45107.1| valyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261978|gb|ADT98719.1| valyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 900

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 82/367 (22%), Positives = 134/367 (36%), Gaps = 50/367 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+            +    I P        ++V   + D  +SR+   
Sbjct: 369 PIEPRLSLQWWVRVETLAKAAGDAVRNGDTVIHPASLEPRWFAWVD-NMHDWCISRQ-LW 426

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D+     A
Sbjct: 427 WGHRIPIWHGPNGETVCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTMGWPDHTP-ELA 485

Query: 254 KFWPADLHVIGKDILRFH-AIYWPAFLLSANLP---------------LPKKVFSHGFIL 297
           KF+P  + V G DIL F  A            P                 K VF HG I 
Sbjct: 486 KFYPTTVLVTGYDILFFWVARMMMFGTFVGGDPAIIGDGAAKKSSPQVPFKNVFLHGLIR 545

Query: 298 HK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            + G K+SKS GN IDP++ +E  G DALR+ L R  + G D    +D    R + + A 
Sbjct: 546 DEFGRKMSKSRGNGIDPLDWVETFGADALRFTLARGASPGGDLAIGEDH--ARASRNFAT 603

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + N    ++  +       +P     T++D  IL     V  ++   + N   +RA   
Sbjct: 604 KLFNATRFAL--LNGASPAPLPPTAELTDADRWILGRLEEVRADVDAALDNYEFNRACEA 661

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +     +   D Y +  K  +L + +P  A T   V   V+  L  LL   +P +   ++
Sbjct: 662 LYHFAWDEFCDWYLELAKV-QLGQEDPQTARTT-AVLATVLDVLLKLLHPVMPFVTEVLW 719

Query: 475 DILFVAD 481
             L   +
Sbjct: 720 KTLTGGE 726



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 49  SDKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQSV 108

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T +  
Sbjct: 109 VEKQLAADGKTKEDFGRELFIDKVWDWKRESGGTIGAQMRRIGDGVDWSRDRF--TMDDT 166

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   E   +D EV  
Sbjct: 167 LSRAVRTIFKRLFDAGLIYQAERLVNWSPVLETAISDLEVKY 208


>gi|228917670|ref|ZP_04081211.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228841907|gb|EEM87013.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 288

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 20/280 (7%)

Query: 238 YLTTTGYLDNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAFLL-SANLPLPKKVFSH 293
           Y  +  + +       +FW ++    +V GKD + FH++ WPA LL      +P+ + S+
Sbjct: 5   YSASKHWAEETGKDDREFWDSEAKTYYVHGKDNIPFHSVIWPAVLLGIGEGAIPRHIVSN 64

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            ++  +  K+S S    +   +++E    D++RYFL       +D  +         N++
Sbjct: 65  EYLTVEKRKLSTSKNWAVWVPDILERYDPDSIRYFLTVNAPENRDTDFSWREFIYSHNSE 124

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           L    GN V+R++  I K Y G++P        D  +     R+ + + E ++      A
Sbjct: 125 LLGAYGNFVNRTLKFIEKYYGGIMPKGS----IDVELKDKIERLYKHVGEAIEQTKFKVA 180

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L  +   V   ++YFD ++PW+ ++ +P      +Y  V +I   A LL+ F+P  + +I
Sbjct: 181 LESIFDAVRFANKYFDERQPWKEREDDPVSCEETIYNCVYLIANFANLLEPFLPFSSERI 240

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFD---PIFPRF 510
            + L +   NR ++       P   L    D   P+F R 
Sbjct: 241 RNTLSIV--NRNWE-------PQHTLPSRIDSVQPLFERI 271


>gi|218463182|ref|ZP_03503273.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 203

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 86/184 (46%), Positives = 122/184 (66%), Gaps = 3/184 (1%)

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             +   G+DG Y ++ +  R+N+DLANGIGNL SRS+SMI+K+ DG IP  G  T+ D++
Sbjct: 17  CAKCPSGQDGSYSEEAIGIRINSDLANGIGNLASRSLSMIVKNCDGKIPECGPLTDEDKA 76

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +L+    +    RE+M  Q IHRALA +I++VS+ DRYF  Q PW LKKT+P+R  TVLY
Sbjct: 77  MLAQVDALHASTREDMGKQQIHRALASIIAVVSDTDRYFAGQAPWALKKTDPERMGTVLY 136

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ--RLKPGFMLHKTFDPIF 507
           VT EV+RQ+AILLQ F+P  + K+ D++    + R F +L +  RL  G  L     P+F
Sbjct: 137 VTAEVVRQIAILLQPFMPDSSGKLLDLVAAPADKRDFAALGEAGRLIAGTPLEAP-TPVF 195

Query: 508 PRFL 511
           PR++
Sbjct: 196 PRYV 199


>gi|163848199|ref|YP_001636243.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526104|ref|YP_002570575.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669488|gb|ABY35854.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449983|gb|ACM54249.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 923

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 75/354 (21%), Positives = 130/354 (36%), Gaps = 40/354 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  E +F R     D  ++        I+P  R  +V       ++D  +SR+   W
Sbjct: 378 IEPLLSEQWFVRTRPLADLAIAAVRDGRVRIVPE-RFEKVYFHWLENIEDWCISRQ-LWW 435

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I +   P                      ++  W  +     +T G+ D  D    +
Sbjct: 436 GHRIPVWYMPDGSIVVPGPDEPPPAEGVQDPDVLDTWFSSGLWPFSTLGWPDETD-DYRR 494

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F+P  +   G DIL F    +       +   P              G K+SKS GNV++
Sbjct: 495 FYPTSVMETGYDILFFWVARMMMMGCYFTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVN 554

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK- 371
           P+++IE+ G DALRY LV     G+D   +   ++   N   AN I N+    +S +   
Sbjct: 555 PLDIIEQYGADALRYTLVTSGTPGQDVNLNPQRIESARN--FANKIWNITRFVISKLGNL 612

Query: 372 ------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
                            +T +D  ILS  + ++ E+   M+      A  Q+   +    
Sbjct: 613 PRTESSKVTAESLQTAGYTLADRWILSRYAHLVAEVDRLMEGYNFGEAGRQIHDFLWGEF 672

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K     + +  R      V   V+     LL  F+P +  +++  L
Sbjct: 673 ADWYVEIAK--VQLEGDEQRNELTRRVLFTVLDGSLRLLHPFMPFVTEEVWQYL 724



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 65/191 (34%), Gaps = 22/191 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    IS        + H+GHA  + I D+L R+ R+ G   L+  GTD  G       +
Sbjct: 43  RPPFVISIPPPNVTGELHLGHAMFVAIEDLLIRWRRMQGYQTLWVPGTDHAGIATQTQVE 102

Query: 64  N-------------------AGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                    K  +  + +R  R +    D S + F  T +    
Sbjct: 103 KLLEREGTSRQAVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWSRERF--TLDPGLS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                 +K++ D G IY+G Y   +S + +   +D EV              PV+  +  
Sbjct: 161 RAVHTAFKRLYDDGLIYRGTYLVNWSPKLQTAVSDLEVEYEERNVSIWYVRYPVRTADWA 220

Query: 164 GYFFRLSAYQD 174
           G      + Q 
Sbjct: 221 GPTAPWGSGQW 231


>gi|311896027|dbj|BAJ28435.1| putative valyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 879

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E       +V   + D  
Sbjct: 359 HCSRCRTVVEPRLSLQWWVKVEPLAKAAGDAVRDGRVEIHPKELERRYFDWVD-NMHDWC 417

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 418 ISRQ-LWWGHQIPVWYGPDGEVVCVGPDEQPPAGEGWHQDPDVLDTWFSSGLWPFSTLGW 476

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +       KF+P D+ + G DI+ F     + +  + +   +P      +       G+
Sbjct: 477 PEKTP-ELEKFYPTDVLLTGHDIIFFWVARMMMFGLYAMDGEIPFKTVALTGLVRDQFGK 535

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++ ++  G DA+R+ L R    G D    +D +K   N    N I N 
Sbjct: 536 KMSKSTGNAVDPLDWMDAYGADAVRFTLARGANPGADVPIGEDWVKGSRN--FCNKIWN- 592

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M      G +P P   T +D  ILS  +  + E+    ++    +    +    
Sbjct: 593 ATRFALMNGATVRGPLPAPEELTAADRWILSRLNSTVTEVDALYEDFEFAKVSDTLFHFA 652

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K   L K    +A     +  EV+     LL   VP + + ++  L  
Sbjct: 653 WDEVFDWYVELSKT-TLNKGG-AQADHARRILGEVLDVTLRLLHPIVPFVTDALWTALTG 710

Query: 480 AD 481
           A+
Sbjct: 711 AE 712



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA++  + D L R  R+ G + L+  G D  G      
Sbjct: 50  SEKPAYTIVIPPPNVTGALHLGHAFQHTLMDALTRRKRMLGFEALWLPGMDHAGIATQNK 109

Query: 62  AQN-------------------AGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +  +     R + D +D S + F  T ++ 
Sbjct: 110 VEQQLAEAGLSRHDLGRAAFVDKVWEWKENYGGRILGQMRRLGDGVDWSRERF--TMDEG 167

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++KK+ D G IY+      +  R     +D EV  
Sbjct: 168 LSQAVQTIFKKLFDDGLIYRAERIINWCPRCLTALSDAEVDH 209


>gi|254302263|ref|ZP_04969621.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322455|gb|EDK87705.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 887

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 87/416 (20%), Positives = 159/416 (38%), Gaps = 51/416 (12%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L+ + ++   E    A GQ Y      ++      +F ++    
Sbjct: 310 YAGLDRFEARKKIIEDLKAQDFFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLA 368

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ------ 225
           +K L    +    ILP  R  ++       ++D  +SR+   WG  I     P       
Sbjct: 369 EKALEVVRNGEVKILPK-RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVA 426

Query: 226 ------------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                                    ++  W  +     +T G+ +        F+P    
Sbjct: 427 MDEAEAKEQAKKHYGHDVELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTL 485

Query: 262 VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
           V G DI+ F    +          +P  K VF HG +  + G K+SKSLGN  DP+++I+
Sbjct: 486 VTGADIIFFWVARMIMFGMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIK 544

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E GVDA+R+ ++   + G+D  +  D L   +  + AN I N  +R V M L+ +D    
Sbjct: 545 EFGVDAIRFSMIYNTSQGQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSV 601

Query: 379 TPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW 434
                     D+ I+S  +   +++++ ++   +  A   V   +     D Y +  K  
Sbjct: 602 DKTKLDYELVDKWIISRLNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI- 660

Query: 435 ELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            L   + D+     T  Y+   ++ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 661 RLYNDDEDKKISKLTAQYMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 55/179 (30%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+   E
Sbjct: 153 YAVRKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSNE 211


>gi|17228813|ref|NP_485361.1| valyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81772420|sp|Q8YX97|SYV_ANASP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|17130665|dbj|BAB73275.1| valyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 1014

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 142/392 (36%), Gaps = 67/392 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    DK L++ +         +R  +V       L+D  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIRPLADKSLAFLDEKNSPEFVPQRWTKVYRDWLVNLRDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +++  DP  ++  W  
Sbjct: 414 WGHQIPAWYAVSETNGQITDNTPFVVAKSTNEAWEKAKSQFGENVQLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +      AK++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPEQTP-DLAKYYPTTTLVTGFDIIFFWVARMTMMAGHFTGQMPFQTVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
                    +K+SKS  N IDP+ +I++ G DALRY LVRE+A  G+D   + D  K + 
Sbjct: 532 HGLVRDENNKKMSKSANNGIDPLLLIDKYGTDALRYTLVREVAGAGQDIRLEYDRKKDES 591

Query: 350 VNADLANGIGNLVSRSVSMILKDYDG----------------MIPTPGAFTESDESILSV 393
            + + +    N +  +   ++ + DG                 +      + +D  I+S 
Sbjct: 592 PSVEASRNFANKLWNAARFVMMNLDGLSTGDLGLGTGNSQSLELSDGVPPSLADRWIISR 651

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
             +V+++    + N  +  A   +   +     D Y +  K    K  +P          
Sbjct: 652 YHQVIKQTTHYIDNYGLGEAAKGIYEFIWGDFCDWYIELVKSRLQKDADPLSRKAAQQTL 711

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             V+  +  LL  F+P +  +I+  L    E+
Sbjct: 712 AYVLEGILKLLHPFMPHITEEIWQTLTQQPED 743



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 22/160 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   +           H+GHA+E  + D L R+HR+ G + L+  GTD     +   
Sbjct: 37  KGGEPYCVVIPPPNVTGSLHMGHAFESALIDTLVRYHRMQGRNTLWLPGTDHASIAVHTI 96

Query: 59  -AKAAQNAGVTTKVFVDQNSRNFRDMADV----------------LDISYDDFIRTTEKR 101
             K  +  G T +    +                           +D S + F  T ++ 
Sbjct: 97  LEKQLKAEGKTRQELGREKFLERSWQWKAESGGTIVNQLRRLGVSVDWSRERF--TLDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                   +  + D+G IY+G Y   +    ++  +D EV
Sbjct: 155 LSKAVAEAFVSLYDEGLIYRGEYLVNWCPATQSAVSDVEV 194


>gi|301062444|ref|ZP_07203096.1| valine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443444|gb|EFK07557.1| valine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 884

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 139/400 (34%), Gaps = 40/400 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        L  E      E Y+ A G  Y      ++ +  + +F + +   
Sbjct: 313 YQGMDRFECREKIIKDLEAEGLLEKIEPYQNAVGHCYR-CKTMIEPILSKQWFVKTAPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +       S    I P      V       +KD  +SR+   WG +IP            
Sbjct: 372 EAAADAVRSGKTRIYPSNWEA-VYFDWMDNIKDWCISRQ-IWWGHRIPAWYCDTCGEITV 429

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ D     K  F+P    + G 
Sbjct: 430 AKTTPSQCGHCSGHDLHQETDVLDTWFSSALWPFSTLGWPDETPELKT-FYPTSALITGF 488

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DIL F    +         ++P             +G+K+SKS GNVIDP+ V++E G D
Sbjct: 489 DILFFWVARMMMMGIHFMGDVPFRDVYIHALVRDAEGKKMSKSKGNVIDPLVVMDEFGTD 548

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           A R+ L    A G+D    ++ +         N I N  +R   M L D +       + 
Sbjct: 549 AFRFTLAALAAQGRDIKLSEERILG--YRHFVNKIWN-AARFAFMNLDDEELPGSETVSS 605

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T +D  IL+   +V   + + +++   + A       V     D Y +  K  +L   + 
Sbjct: 606 TLADRWILTRIGQVSGIVAQALEDYQFNEAAGLCYQFVWHEFCDWYLEMAKQ-DLYGEDQ 664

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R         E +     LL  F+P +  +I+  L  AD
Sbjct: 665 ARKHATRRTMREALAASLKLLHPFMPFVTEEIWQRLPGAD 704



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R    I           H+GHA    + D+L R+ ++ G +VL+  GTD  G      
Sbjct: 36  SDRSPYCIVIPPPNVTGTLHMGHALNNTLQDILCRYKKMAGDNVLWQPGTDHAGIATQNV 95

Query: 62  AQNAGVT----------------TKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKR 101
            +                        +  +         R +    D S + F  T ++ 
Sbjct: 96  VERDLAAQGTDRHAVGREKFIDLVWEWRKKYGGLIINQLRRLGCCCDWSRERF--TMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ ++ ++G IY+G Y   +  R      D EV  
Sbjct: 154 LSRAVKEVFVRLHEEGLIYRGDYIINWCPRCHTALADLEVEH 195


>gi|170751800|ref|YP_001758060.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658322|gb|ACB27377.1| valyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 905

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 135/371 (36%), Gaps = 45/371 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  +    ++ L          +P         ++ + ++   +SR+   W
Sbjct: 372 IEPYLTDQWYVNVKPLAERALQAVRDGQTKFVPENYEKIFFQWL-TNIEPWCISRQ-LWW 429

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I +  D +                               ++  W  +     +T G+
Sbjct: 430 GHQIPVWYDDEGGIFVAESEEEARAAAEAQRGRPVALTRDADVLDTWFSSALWPFSTLGW 489

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            D+     A+++P +  V GKDIL F    +      L+   P              G K
Sbjct: 490 PDSTQ-ELARYYPTNTLVTGKDILFFWVARMMMMGLHLTDRAPFETVYLHTLVRDASGAK 548

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+E+I++VG D LR+ L      G+D     D ++     + A  + N  
Sbjct: 549 MSKSKGNVVDPLELIDQVGADVLRFTLCALAVQGRDIKLSTDRVQG--YRNFATKLWN-A 605

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   +     D       A    +   L+  +R + E+   ++    + A A     V 
Sbjct: 606 ARFAELNGCRLDPAFDPRSATGAINRWALTEAARAVDEVTGALEAFRFNDAAAAAYRFVW 665

Query: 423 --EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               D Y +  KP  L+    +P   +        +I Q+A LL  F+P L  +++ I  
Sbjct: 666 NIFCDWYLELAKP-VLQGEGVDPAIRAETQASVAFLIDQVAKLLHPFMPFLTEELWAIKG 724

Query: 479 VADENRCFQSL 489
                R   +L
Sbjct: 725 ADLPERGLLTL 735



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA    + D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  PPYCIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGKDVLWQPGTDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             +  +                +  +           + +    D S + F  T ++   
Sbjct: 96  RMMERQEPGRREIGRAAFVEKVWAWKAESGGAIVNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  +  +G IY+      +  + +   +D EV +     +      PV
Sbjct: 154 RAVLKTFVDLHRQGLIYRDKRLVNWDPKFQTAISDLEVQQIETRGHLWHFDYPV 207


>gi|262066120|ref|ZP_06025732.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380215|gb|EFE87733.1| valine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 887

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 155/399 (38%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + + ++   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KAQDFFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEIKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEVEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPERTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEFGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEEGKKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              + ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVKKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|256846924|ref|ZP_05552378.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717722|gb|EEU31281.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 887

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 86/400 (21%), Positives = 155/400 (38%), Gaps = 51/400 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + +  +   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KAQGLFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           Y+   V+ Q   LL  F+P +  +I+  + V  +    Q+
Sbjct: 678 YMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEEGKKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|53747884|emb|CAF05629.1| hypothetical protein [Angiococcus disciformis]
          Length = 1103

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 118/371 (31%), Gaps = 36/371 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----EFILPIERRNE 195
           V +     +++   N   W      ++          S               P  +   
Sbjct: 365 VPESWTNTFFHWMRNIHDWCVSRQLWWGHQIPAYYCTSCSPRQGDDTDLPLDAPTVKVGG 424

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           V       +      +     G         ++  W  +     +T G+       K  F
Sbjct: 425 VDFARAEPIVAREQPKSCPKCGGASFIQDPDVLDTWFSSGLWPFSTLGWPRETPELKT-F 483

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  +   G DI+ F    +         ++P             KG+K+SK+ GNVIDP
Sbjct: 484 YPTSVMETGHDIIFFWVARMMMMGIHFMGDVPFRTVYLHAMVRDEKGQKMSKTKGNVIDP 543

Query: 314 IEV--------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
           +++                    +   G DALR+ L      G+D     D L+      
Sbjct: 544 LDIVLGAPADKLQPTLKNRFPQGMPPFGADALRFTLASLTQQGRDIKLSMDRLEG--YKA 601

Query: 354 LANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
             N + N  SR   M + D+            T +D  ILS   R   E R  +++    
Sbjct: 602 FGNKLWN-ASRFALMNMGDFRMEAGPLDRSTLTLADRWILSRLQRATTEARALLESYSFG 660

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A + +   +     D Y +  K   L   +     +   V V  + ++  LL  F+P +
Sbjct: 661 EAASTLYQFLWAEFCDWYIELAK-GSLYGEDAAAKDSTRRVLVYCLDRILRLLHPFMPFI 719

Query: 470 ANKIFDILFVA 480
             +I+  L +A
Sbjct: 720 TEEIWQKLPMA 730



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 19/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           HIGHA    I D+LAR+ R+ G + L+  GTD  G      
Sbjct: 12  SDKPAFSIVLPPPNVTGSLHIGHALTATIQDILARWKRMSGFNTLWLPGTDHAGIATQMV 71

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +     T                   +  +      +    L  S D      T +++ 
Sbjct: 72  VEKELKKTEGKSRHDLGRAAFLERVWEWKGKYGARIGEQHRFLGASLDWSRERFTMDEQS 131

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
               R ++ ++ ++G +Y+      +        +D EV      +       
Sbjct: 132 SAAVREVFVRLYEEGLMYRAQKLINWCPSCRTALSDLEVEHEESKKGSIWHIR 184


>gi|168024570|ref|XP_001764809.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684103|gb|EDQ70508.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 906

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 78/390 (20%), Positives = 131/390 (33%), Gaps = 55/390 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + +F  +    DK L   E     I+P  R  ++ +F  S +KD  +SR+   W
Sbjct: 349 VEPLVSKQWFVIMQPLADKALKALEDGELRIIPD-RFEKIYNFWLSNIKDWCVSRQ-LWW 406

Query: 217 GIKIP-----------------------------------DDPQYIMYVWIDALTNYLTT 241
           G +IP                                        ++  W  +     +T
Sbjct: 407 GHRIPVWYVEGSDESDYIVARSEEDAYKAARAKHGEDVKLTQESDVLDTWFSSGLWPFST 466

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +       +F+P  +   G DIL F    +       +  LP             +
Sbjct: 467 LGWPNTSADDYQRFYPTAVLETGHDILFFWVARMIMMGIEFTGKLPFSTVYLHGLVRDAQ 526

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKSLGNVIDP++ IEE G DALR+ L      G+D     + L    N    N + 
Sbjct: 527 GRKMSKSLGNVIDPLDTIEEYGTDALRFTLATGTTPGQDVNLSMERLTS--NKAFTNKLW 584

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESD------------ESILSVCSRVLQEIRENMQN 407
           N     +  +    D          E D              ++S    ++  +  + + 
Sbjct: 585 NAGKFILLNLPPTSDTSAWEHIREHEFDTEAGVASLPLSERWVVSKLHELVDSVTTDYEK 644

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   +         D Y +A K    K  +    S    V   V   +  LL  F
Sbjct: 645 YFFNEAGRAIYDFFWSDFADWYIEASKTRLYKNEDVTSLSRTRAVLSYVFETVLRLLHPF 704

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +P +  +++  +          S   R +P
Sbjct: 705 MPFVTEELWQGMPHEGVALIVSSWPNRGRP 734



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 61/181 (33%), Gaps = 22/181 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E   I           H+GHA  + + D++ARF R+ G   L+  GTD  G         
Sbjct: 34  EPFVIPMPPPNVTGALHMGHAMFVTLEDIMARFWRMRGRPTLWMPGTDHAGIATQLVVEK 93

Query: 60  --------------KAAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                         +A        K  +    +   R +    D S + F  T + +   
Sbjct: 94  MLTAQGIKRTELGREAFVERVWEWKEKYGGTITNQMRRLGASCDWSREHF--TLDDQLSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                + ++ +KG IY+G Y   +S   +   +D EV    +         PV     E 
Sbjct: 152 AVLEAFCRLHEKGLIYRGSYMVNWSPHLQTAVSDLEVEYSEEPGKLYYFKYPVAGGSSED 211

Query: 165 Y 165
           Y
Sbjct: 212 Y 212


>gi|227874318|ref|ZP_03992503.1| valine--tRNA ligase [Oribacterium sinus F0268]
 gi|227839806|gb|EEJ50251.1| valine--tRNA ligase [Oribacterium sinus F0268]
          Length = 900

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 151/395 (38%), Gaps = 59/395 (14%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F ++       +          +P       + ++
Sbjct: 337 VPHSHNVGVHDRCGTTVEPMVKPQWFVKMEELAKPAIEALNKGDLEFVPENYGKTYLHWL 396

Query: 201 KSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMYVWI 232
           +  +KD  +SR+   WG +IP                               +  +  W 
Sbjct: 397 E-NIKDWCISRQ-LWWGHRIPAYYCEDCGELIVSLEKPECCPKCKSASLRQDEDTLDTWF 454

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +      T G+ +  +     F+P D+ V G DI+ F    + +     +   P  K +
Sbjct: 455 SSALWPFETLGWPEETE-DYKYFYPTDVLVTGYDIIFFWVVRMVFSGIEQTGKTPFKKVL 513

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +G K+SKSLGN IDP+E+I   G DALR  L+   A G D  +    ++   
Sbjct: 514 IHGLVRDDQGRKMSKSLGNGIDPLEIIGTYGADALRMTLLTGNAPGNDMRFYHSRVEASR 573

Query: 351 NADLANGIGNLVSRSVSMILKDYDGM-----------------IPTPGAFTESDESILSV 393
           N    N + N  SR + M +K+ +                      P     +D+ ILS 
Sbjct: 574 N--FMNKVWN-ASRFLFMNVKEEEKEALLSLVGKKEASLEEVLSVIPKNLALADQWILSK 630

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
           C+  + E+  N+++  +  AL ++ + + E   D Y +  KP  L     +  +  L+  
Sbjct: 631 CNHTVSEVTRNLESFDLGIALDKIQNFIWEEFCDWYIEMVKP-RLYSEGGESKTLALWTL 689

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI---LFVADEN 483
           ++V++    LL  F P +  +I+D    LF  +E 
Sbjct: 690 LKVLKTSLSLLHPFCPFITEEIYDTEKSLFPGEEK 724



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 54/177 (30%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         Q H+GHA +  + D L RF R+ G + L+  GTD          
Sbjct: 34  NKKPFTIMMPPPNVTGQLHMGHALDNALQDTLIRFKRMQGFEALWQPGTDHAAIATEVKV 93

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + ++      +    +  S  +D    T ++    
Sbjct: 94  INKLKDMGIDKWELGREGFLKEAWKWKEEYEDRIVNQLHKMGSSADWDRLRFTMDEGCSH 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                + ++  KG IY+G     +        +D EV        +     PV   E
Sbjct: 154 AVLETFVRLYKKGLIYRGSRMINWCPVCNTSISDAEVLHEEQEGSFWHILYPVVGEE 210


>gi|256028619|ref|ZP_05442453.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766537|ref|ZP_06525915.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718092|gb|EFD82104.1| valyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 887

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 155/399 (38%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++  +   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KEQGLFIKTEHLHHAVGQCYR-CGTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDKHVFVAMDEVEAKEQAKKHYGHD 443

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLESFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYRDGLIYQGEYMVNWCPSCGTALADDEVDHVEKDGHLWQIKYPVKDSDE 211


>gi|237742952|ref|ZP_04573433.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430600|gb|EEO40812.1| valyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 887

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 86/400 (21%), Positives = 155/400 (38%), Gaps = 51/400 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + +  +   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KAQGLFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEVEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P    V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTSTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNNDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           Y+   V+ Q   LL  F+P +  +I+  + V  +    Q+
Sbjct: 678 YMLWTVLEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQA 717



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++K +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFKDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|317486342|ref|ZP_07945172.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922412|gb|EFV43668.1| valyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 882

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 138/397 (34%), Gaps = 25/397 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAY 172
              G  Y+        + ++ +    ++   A           P  WM+    +      
Sbjct: 342 HSVGHCYRCKTVVEPHMSEQWFVASTKLAPRARAAVPEMTQIFPENWMKTYYNWLDNIRD 401

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                  +  H        +  ++I   +             D G         ++  W 
Sbjct: 402 WCISRQIWWGHRIPAWTCPQCGKLIVSEEDPTSC-------PDCGSTELVQESDVLDTWF 454

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +     +T G+ D      A F+P  + V G DIL F    W A ++   L    +V  
Sbjct: 455 SSALWPFSTMGWPDKTK-DLATFYPTSVLVTGFDILFF----WVARMMMMGLHFMDQVPF 509

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
               LH      +G K+SKS GNVIDP+ +IE+ G DALR+ L    A G+D    +D +
Sbjct: 510 KHVYLHALVRDAQGRKMSKSTGNVIDPLVMIEKYGTDALRFTLTAFAAMGRDIRLSEDRI 569

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +        N + N    ++  + +D    +          + +L     V +++   ++
Sbjct: 570 EG--YRHFVNKLWNASRFALMNLPEDVPAAVELDKVQGLHHQWLLHRLEEVKKDVDGAIE 627

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A   +   +     D Y +  KP    K    R +   YV    +R+  IL+  
Sbjct: 628 AYRFNDAAQTLYKFLWNEFCDWYLELIKP--DMKEEGPRKTEAQYVLWTALREFLILMHP 685

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
            +P +  +I+  L     +     L    +PG +  +
Sbjct: 686 IMPFVTAEIWQALPGGAGSDAAVQLLPEARPGCLKPE 722



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           E   I           HIGHA    + DVL R  R  G  VL+  GTD  G         
Sbjct: 38  EPFSIVIPPPNVTGALHIGHALNHTLIDVLCRHARQKGKKVLWLPGTDHAGIATQNVVER 97

Query: 61  ---------------AAQNAGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                          A        K  + ++     R + D +D + + F  T ++    
Sbjct: 98  ALAKEGKTRHDLGREAFVERVWQWKEDYGNRILNQIRMLGDSVDWTRERF--TMDEGLSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             R ++ ++  +G IYKG Y   +  R      DDEV    +  +
Sbjct: 156 AVRKVFVELYKEGYIYKGKYIINWCSRCHTALADDEVDHMPEKGH 200


>gi|325911674|ref|ZP_08174081.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476440|gb|EGC79599.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 879

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDAAAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRYQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|282900149|ref|ZP_06308106.1| Valyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195031|gb|EFA69971.1| Valyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1051

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 146/398 (36%), Gaps = 58/398 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    DK L + +         +R  +V       L+D  +SR+   
Sbjct: 370 PVEPLLSTQWFVKIRPLADKTLEFLDQENSPEFVPQRWGKVYRDWLVNLRDWCISRQ-LW 428

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +++  DP  ++  W  
Sbjct: 429 WGHQIPAWYAVSETGGEITDSTPYFVAHNEMEALEKARALGCENVQLIQDPD-VLDTWFS 487

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        ++P    V G DI+ F    +   A   +  +P      
Sbjct: 488 SGLWPFSTLGWPEKTQDLDT-YYPTTTLVTGFDIIFFWVARMTMMAGHFTGKMPFQTVYI 546

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI-ACGKDGFYDKDG----- 345
                    +K+SKS  N IDP+ +I++ G DALRY LV+E+   G+D   + D      
Sbjct: 547 HGLVRDENNKKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDRKKDES 606

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIREN 404
           +    + + AN + N  SR V M L+         P     SD  ILS   +V+++   +
Sbjct: 607 VSVEASRNFANKLWN-ASRFVMMNLEGQTPEQLGEPQGIELSDRWILSRYHQVVKQTNNH 665

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           + N  +  A   +   +     D Y +  K    K  +P    T   +   V+  +  LL
Sbjct: 666 IDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQKDADPVFRKTAQQILALVLSGVLKLL 725

Query: 463 QAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFML 499
             F+P +  +I+  L     +NR F +L    +    L
Sbjct: 726 HPFMPHITEEIWQTLTQQPIDNRQFLALQSYPEADDKL 763



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 19/172 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              +           H+GHA+E  + D L R+HR+ G + L+  GTD     +    +  
Sbjct: 56  PYCVVIPPPNVTGSLHMGHAFESALIDALVRYHRMKGRNTLWLPGTDHASIAVQTILEKK 115

Query: 66  GVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
             +                   +  ++     +    L +S D      T ++       
Sbjct: 116 LKSEGKNRYELGRDKFLERAWQWKAESGGTIINQLRRLGVSVDWSRERFTLDEGLSKAVL 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQ 158
             + K+ ++G IY+  Y   +    ++  +D EV     +G  ++ +++   
Sbjct: 176 EAFIKLYEEGLIYRSNYLVNWCPASQSAVSDLEVEPKEVNGNLWHFRYHLTD 227


>gi|309804780|ref|ZP_07698844.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165890|gb|EFO68109.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 879

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDATAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|312871640|ref|ZP_07731732.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311092865|gb|EFQ51217.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 879

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDAAAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|312873260|ref|ZP_07733316.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091271|gb|EFQ49659.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 879

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDAAAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|160902902|ref|YP_001568483.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083631|sp|A9BIJ7|SYV_PETMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|160360546|gb|ABX32160.1| valyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 874

 Score =  183 bits (463), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 79/388 (20%), Positives = 145/388 (37%), Gaps = 40/388 (10%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             + E        +       ++ +  + +F ++    +K +   E+      P  R  +
Sbjct: 329 LLEKEEDYTHSVGHCYRCDTVIEPLLLDQWFVKMKPLAEKAIQVVENDEIKFYPE-RWKK 387

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYI 227
           V       ++D  +SR+   WG +IP                               + +
Sbjct: 388 VYLNWMYEIRDWCISRQ-LWWGHRIPVWYCQNCGHVNVSVEDVKKCEKCGSTDLKQDEDV 446

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +  +  K K++P DL V G DI+ F    +           P
Sbjct: 447 LDTWFSSALWPFSTLGWPEETEDLK-KYYPTDLLVTGFDIIFFWVARMIMMGEKFMGEKP 505

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                         G K+SKSLGN +DP+EVI E G D +R+ L    A G+D   D   
Sbjct: 506 FHDVYLHQLVRDKYGRKMSKSLGNGVDPLEVINEYGTDPVRFTLSVLAAQGRDIKLDVGS 565

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                    AN I N  +R V + ++DY+  +         D+ IL+  +  + EI +++
Sbjct: 566 FDA--YRKFANKIWN-AARFVLLNMEDYEKTVLKDEDLKIEDKWILTRLNSTILEISKDL 622

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +     +A  ++         D Y +A K   L     D+   V  V ++V      LL 
Sbjct: 623 EVYNYDQAARKLYDFFWNELCDWYIEASK-NRLNSIGKDKL-VVQNVILQVFDSSLRLLH 680

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491
            F+P ++ +++  L +  ++    S   
Sbjct: 681 PFMPYISEELWQKLPIEKDSELLISAKW 708



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I         + HIGHA  +++ D+  R++R+ G + ++  G D  G       +  
Sbjct: 34  KFSIVIPPPNITGRIHIGHALNIVLQDISVRYNRMKGKETVWIPGEDHAGIATQHVVEKY 93

Query: 66  GVT-----------------TKVFVDQNSRNFRDMADV----LDISYDDFIRTTEKRHHD 104
            +                  T  + ++   + R+        +D S + F  T ++  + 
Sbjct: 94  LLKEEGKRREDYTREEFLKITWDWANKYRNHIREQIKALAASVDWSRERF--TLDEGLNQ 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             R ++  + ++G IYKG Y   +         DDEV    +         P++
Sbjct: 152 AVRKVFVSLYNEGLIYKGKYIVNWCPSCGTVLADDEVEHSEEKGKLWYIKYPLE 205


>gi|218296345|ref|ZP_03497088.1| valyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243139|gb|EED09670.1| valyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 718

 Score =  183 bits (463), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 87/394 (22%), Positives = 155/394 (39%), Gaps = 52/394 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +    P+++     ++ R+    +++L   E      +P  R  +V       ++D ++
Sbjct: 200 CSRCGTPLEYAIFPQWWLRMKPLAEEVLKGLERDEIAFVPE-RWKKVNMDWLRNVRDWNI 258

Query: 210 SRKTFDWGIKIP-------------------DDP--------------QYIMYVWIDALT 236
           SR+   WG +IP                   +DP              + +   W  +  
Sbjct: 259 SRQ-LWWGHQIPAWYCQDCGAVNVPKPESYLEDPTACEACGSQSLKRDEDVFDTWFSSAL 317

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHG 294
             L+T G+ +  +  KA F+P D+ V G DIL           +      P    +    
Sbjct: 318 WPLSTLGWPEKTEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGL 376

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +  KG+K+SKS GNVIDP+E++E  G DALR+ L      G+D   D   L      ++
Sbjct: 377 VLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLATGGQDIRLDLRWL------EM 430

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           A    N +  +   +L   +G  P   A T +D  + S  +R ++EI    +   + +A 
Sbjct: 431 ARNFANKLYNAARFVLLSREGFSPKEDAPTLADRFMKSRLARGVEEITALYEALDLAQAA 490

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +V  L+     D Y +A KP  LK  N    +  L    E +  L  LL   +P + ++
Sbjct: 491 REVYELIWSEFCDWYLEASKP-ALKAGN----AHTLRTLEESLATLLKLLHPIMPFITSE 545

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           ++  L    E    ++  +           F+ +
Sbjct: 546 LYQAL-TGREELTLEAWPEPGPQDPEAEARFEVL 578


>gi|309803196|ref|ZP_07697293.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164704|gb|EFO66954.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 879

 Score =  183 bits (463), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDAAAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|315653725|ref|ZP_07906645.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325913051|ref|ZP_08175424.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|315489087|gb|EFU78729.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325477731|gb|EGC80870.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 879

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDAAAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|259501662|ref|ZP_05744564.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191130|ref|ZP_07267384.1| valyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806332|ref|ZP_07700345.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309807726|ref|ZP_07701660.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809959|ref|ZP_07703807.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871976|ref|ZP_07732058.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874665|ref|ZP_07734689.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921098|ref|ZP_08277621.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259166947|gb|EEW51442.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167316|gb|EFO69482.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308168986|gb|EFO71070.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169747|gb|EFO71792.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089895|gb|EFQ48315.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311092553|gb|EFQ50915.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935005|gb|EGG31494.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 879

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    DK+LS  +   +     ER    +      + D  +SR+   W
Sbjct: 352 IEPRLSTQWFVKMKPLADKVLSNQKEDDKVNFVPERFEGTLEHWMENVHDWVISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                        D    ++  W  +     +T G+ D       
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P +  V G DI+ F    + + +   +   P    V        +G K+SKSLGN I
Sbjct: 471 RYFPTNALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGNGI 530

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
           DP++V+E+ G D+LR+FL+   A G+D  +    +    N    N I N  SR V M L 
Sbjct: 531 DPMDVVEKYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWN--FINKIWN-ASRFVIMNLP 587

Query: 371 -KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                  +P    F  SD+ I    +RV++++           A  ++ + +     D Y
Sbjct: 588 EDAAAAHMPDVDTFDLSDKWIFDKLNRVVKKVTRLFDEFQFGEAGREMYNFIWNDFCDWY 647

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   L  T+           V ++ Q+  L+   +P +  K++
Sbjct: 648 IEISKV-ALNGTDEILKKHKQDNLVWILDQILRLIHPIMPFVTEKLW 693



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     I         + H+GHA++  I D L RF R+ G D L+  G D  G      
Sbjct: 33  KKAHPYSIVIPPPNVTGKLHLGHAWDTSIQDTLIRFKRMQGYDTLYLPGMDHAGIATQAK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ +   +     + +S D      T +    
Sbjct: 93  VEEKLRKQGQDRHQLGREKFIKQVWDWKDEYASIIKSQWGKMGLSLDYSRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G Y   +  + E   +D EV    D   +   + P+
Sbjct: 153 KAVRKVFVKLYEEGLIYRGQYIINWDPKLETALSDIEVIHKDDNGAFYHINYPL 206


>gi|163782286|ref|ZP_02177284.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882319|gb|EDP75825.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 1171

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 122/322 (37%), Gaps = 31/322 (9%)

Query: 206  DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
               +  K    G +     + ++  W  +        G+ ++ +  K   +P DL V G 
Sbjct: 705  KWRILLKCKKCGSERLKQEEDVLDTWFSSALWPFGVFGWPESSEDLK-NLYPTDLLVTGF 763

Query: 266  DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
            DI+ F    +         ++P             KG+K+SK+ GNVIDP++VI++ G D
Sbjct: 764  DIIFFWVARMIMMGTYFMEDIPFHDVYVHALVRDEKGQKMSKTKGNVIDPLDVIKDYGAD 823

Query: 324  ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            ALR+ L      G+D    K   +       AN I N     +     D+  M+P     
Sbjct: 824  ALRFTLAILTVQGRDIKLSKKRFEG--YKHFANKIWNATRFVLMNTPDDFATMLPYMAPL 881

Query: 384  TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP---WELKK 438
               D  I+++ +   +++   +++    RA   +         D Y +  K     EL +
Sbjct: 882  KPEDRWIMTLLNETAEKVNRALESYDFSRASQAIYDFFWSDFCDWYIEFTKERIYRELPE 941

Query: 439  TNPDRAS-----------TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCF 486
               + A            T LY    V+ +   +L  F+P +  +++  L  +D E+   
Sbjct: 942  GEDEAAQKERATILSEKTTALYTLHYVLEKALRILHPFMPYITEELWHKLPSSDGESISL 1001

Query: 487  QSLDQRLKPGFMLHKTFDPIFP 508
            +   +         K  + +FP
Sbjct: 1002 KDFPE---------KKQEEMFP 1014



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 18/173 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----- 58
           R+K  +           H+GHA    + D++AR+ R+ G  V++  G D  G        
Sbjct: 34  RKKFSVVIPPPNVTGSLHMGHALNSTLQDIVARWQRMKGRQVVWVPGFDHAGIATQYVVD 93

Query: 59  -----------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                          Q        +V ++    R   + L +S D      T ++     
Sbjct: 94  KQLQEEGKSRLELGRQEFIRKVWEWVPKSRNAIRTQLEKLGVSVDWKRERFTLDEGFSRA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            R  ++++ + G IY+  Y   +  +D    +D EV    +         P++
Sbjct: 154 VRKAFRELYENGLIYRSEYIVNWCPKDLTALSDLEVEHEEEKGKLWYIKYPLE 206


>gi|307150723|ref|YP_003886107.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980951|gb|ADN12832.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 908

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/383 (21%), Positives = 137/383 (35%), Gaps = 60/383 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L+  +         ER  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIDPLAKKALTCLDEDNSPRFIPERWTKVYRDWLVKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I++  DP  ++  W  
Sbjct: 414 WGHQIPAWYVVSETGGQITDHTPFIVAYSPEEALEKAQQQYGDKIQLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +      A ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTMGWPEQTL-DLATYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQMPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                   G+K+SKS  N IDP+ +I + G DALRY L+RE+A        +      + 
Sbjct: 532 HGLVRDENGKKMSKSANNGIDPLLLIRKYGSDALRYTLIREVAGAGQDISLQYNRQTDES 591

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R V M L          PT  A   SD  ILS  +  +Q+ R
Sbjct: 592 ESVEASRNFANKLWN-AARFVMMNLDGKTPQALGEPTSEALEASDRWILSRFALTVQQTR 650

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             + N  +  A   +   +     D Y +  K     K++P R          V+  +  
Sbjct: 651 NYIDNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLFDKSSPSRL-VAQKTLAFVLEGILK 709

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
           LL  F+P +  +I+ IL    + 
Sbjct: 710 LLHPFMPHITEEIWHILTQNADQ 732



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 23/164 (14%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT-- 69
                    H+GHA++  + D L R+ R+ G + L   G D     +    +        
Sbjct: 47  PPPNVTGSLHLGHAFDTALMDTLVRYKRMCGFNTLCLPGIDHASIAVQTILEKQLKAEGK 106

Query: 70  --------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHDTCRILWK 111
                           +  Q+     +    L +S D     F  T ++      R  + 
Sbjct: 107 TRYDIGREKFLEKAWEWKQQSGGTIVNQLKRLGLSADWSRQRF--TLDESLSKAVRRAFV 164

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
           ++ + G IY+G Y   +    ++  +D EV     DG  ++ ++
Sbjct: 165 QLYEAGLIYRGNYLVNWCPESQSAVSDLEVENKEVDGHLWHFRY 208


>gi|296328555|ref|ZP_06871074.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154364|gb|EFG95163.1| valine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 887

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 155/399 (38%), Gaps = 51/399 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + +  +   E    A GQ Y      ++      +F ++    +K L    +    ILP 
Sbjct: 327 KAQDLFIKTEHLHHAVGQCYR-CQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
            R  ++       ++D  +SR+   WG  I     P                        
Sbjct: 386 -RMEKIYYNWLENIRDWCISRQ-IWWGHRIPAWYGPDRHVFVAMDEAEAKEQAKKHYGHD 443

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                   ++  W  +     +T G+ +        F+P +  V G DI+ F    +   
Sbjct: 444 VELSQEEDVLDTWFSSALWPFSTMGWPEKTK-ELDLFYPTNTLVTGADIIFFWVARMIMF 502

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +P  K VF HG +  + G K+SKSLGN  DP+++I+E GVDA+R+ ++   + 
Sbjct: 503 GMYELKKIPF-KNVFFHGIVRDEIGRKMSKSLGNSPDPLDLIKEYGVDAIRFSMIYNTSQ 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
           G+D  +  D L   +  + AN I N  +R V M L+ +D              D+ I+S 
Sbjct: 562 GQDVHFSTDLL--GMGRNFANKIWN-AARFVIMNLEGFDVKSVDKTKLDYELVDKWIISR 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA---STVL 448
            +   +++++ ++   +  A   V   +     D Y +  K   L   + D+     T  
Sbjct: 619 LNETAKDVKDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI-RLYNDDEDKKISKLTAQ 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Y+   ++ Q   LL  F+P +  +I+  + V  +    Q
Sbjct: 678 YMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGDTIMLQ 716



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     I D L R++R+ G + L+  G D  G      
Sbjct: 33  SEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + ++           L  S  +D    T ++   
Sbjct: 93  VERKLAEDGLKKEDIGREKFLEMTWDWKEKYGGIITKQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  +E
Sbjct: 153 YAVRKIFNDLYHDGLIYQGEYMVNWCPSCGTALADDEVDHEEKDGHLWQIKYPVKDSDE 211


>gi|291458879|ref|ZP_06598269.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418133|gb|EFE91852.1| valine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 904

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 139/383 (36%), Gaps = 52/383 (13%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    +   ++     V+ M +  +F R+       +   +S     +P       + ++
Sbjct: 337 VPHRHNVGTHDRCGTTVEPMVKPQWFVRMEELAKPAIEALKSGELRFIPENYGKTYLHWL 396

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
           +  ++D  +SR+ +                             G       +  +  W  
Sbjct: 397 E-NIRDWCISRQLWWGHRIPAYYCDDCGELIVSEEAPKCCEKCGSTHFHQDEDTLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +      T G+ +      + F+P D+ V   DI+ F    + +     +  LP    + 
Sbjct: 456 SALWPFETLGWPEKTA-ELSYFYPTDVLVTAYDIIFFWVVRMVFSGIEQTGKLPFRHVLI 514

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP+EVI + G DALR  L+   A G D  +     +    
Sbjct: 515 HGLVRDDQGRKMSKSLGNGIDPLEVIRKYGADALRMTLLSGNAPGNDMRFYWSKAEA--G 572

Query: 352 ADLANGIGNLVSRSVSMILK---------------DYDGMIPTPGAFTESDESILSVCSR 396
            +  N + N  SR + M L                D       P     +D  ILS  + 
Sbjct: 573 RNFMNKVWN-ASRFIMMNLDEESLSVLRGEGGGELDAILERSRPKELYAADRWILSRMNH 631

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             QEI  N+ +  +  AL ++ S + E   D + +  KP  L   + +     L+   EV
Sbjct: 632 TAQEIERNLSSYDLGIALDKIQSFLWEEFCDWFIEMVKP-RLHGEDRESRIAALWTLCEV 690

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     LL  F P +  +I+D L
Sbjct: 691 LMCSLKLLHPFCPFITEEIYDTL 713



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 18/177 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA +  + D L R+ R++G + L+  G D          
Sbjct: 34  KKKPYTIMMPPPNITGQLHMGHALDNTLQDSLIRWKRMEGYEALWQPGCDHAAIATEVRV 93

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + ++  +   +    +  S  +D    T ++    
Sbjct: 94  TNELKARGIDKHALGREGFLKEAWSWKEEYEKRIVNQLHKIGSSADWDRLRFTMDEGCSR 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +  +  +  KG IY+G     Y        +D EV       ++   + P+   E
Sbjct: 154 AVQTAFLSLYRKGYIYRGSRIVNYCPHCRTSLSDAEVVHEEQDGFFWHINYPIVGEE 210


>gi|257468336|ref|ZP_05632430.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062610|ref|ZP_07927095.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688286|gb|EFS25121.1| valyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 886

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/383 (21%), Positives = 143/383 (37%), Gaps = 46/383 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +          V+    + +F +      K L    +    I+P  R  ++       +
Sbjct: 340 HNVGQCYRCQTVVEPRVSKQWFVKTETLAQKALEVVRNGEIKIMPK-RMEKIYYNWLENI 398

Query: 205 KDLSLSRKTFDWG--IKIPDDPQY------------------------------IMYVWI 232
           +D  +SR+   WG  I     P                                ++  W 
Sbjct: 399 RDWCISRQ-LWWGHRIPAWYGPDKYIFVARDENEAKEMAVKHYGKEMELIQEEDVLDTWF 457

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVF 291
            +     +T G+ +        F+P    V G DI+ F       F L     +P K VF
Sbjct: 458 SSALWPFSTMGWPEKTK-ELETFYPTSTLVTGADIIFFWVARMIMFGLYEMKEIPFKDVF 516

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            HG +  + G K+SKSLGN  DP+ +IEE G DA+R+ ++   + G+D  + +  L+  +
Sbjct: 517 FHGIVRDELGRKMSKSLGNSPDPLNLIEEFGADAIRFSMIYNTSQGQDVHFSEKLLE--M 574

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQ 408
             + AN I N V+R V M L+ +D              D+ I S  +   +E+ + +   
Sbjct: 575 GRNFANKIWN-VARFVIMNLEGFDVKSVNKEELKLELVDKWIFSRMNETSKEVADYIDKF 633

Query: 409 LIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQA 464
            +  A   V   +     D Y +  K          +AS  T  YV   V+     +L  
Sbjct: 634 QLDDAAKAVYEFLRGDFCDWYVELAKVRLYNDDEAGKASKTTAQYVLWTVLEAGLRMLHP 693

Query: 465 FVPKLANKIFDILFVADENRCFQ 487
           F+P +  +I+  + V  ++   Q
Sbjct: 694 FMPFITEEIWQKIKVEGDSIMIQ 716



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GH     I D L R+ R+ G + L+  G D  G      
Sbjct: 33  EGKESYSIVIPPPNVTGILHMGHILNNSIQDTLVRYKRMCGYNTLWLPGCDHAGIATQNK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + +++          +  S  +D    T ++   
Sbjct: 93  VERKLAEEGLKKEDLGREKFIEETWKWKEKHGGIITTQLRKIGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  + + G IY+G Y   +  R      DDEV       +      PV+  +E
Sbjct: 153 KAVREIFVHLYNDGLIYQGEYMVNWCPRCGTALADDEVEHVEKDGHLWHVKYPVKDSDE 211


>gi|218441136|ref|YP_002379465.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218173864|gb|ACK72597.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 909

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 136/376 (36%), Gaps = 57/376 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L++ +         ER  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIDPMAKKALAFLDEQNSPQFIPERWTKVYRDWLVKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I++  DP  ++  W  
Sbjct: 414 WGHQIPAWYVVNLTDGKITDDTPFVVAYSEEEALKTAKQQYGDNIQLSQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +     K  ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTMGWPEETTDLKT-YYPTSTLVTGFDIIFFWVARMTMMAGYFTGQMPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
                   G+K+SKS  N IDP+ +IE+ G DALRY L+RE+A  G+D     D    + 
Sbjct: 532 HGLVRDENGKKMSKSANNGIDPLILIEKYGADALRYTLIREVAGAGQDISLQYDRTSDQS 591

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIRE 403
            + + +    N +  +   ++ + DG  P              D  ILS  ++V+Q+ R 
Sbjct: 592 ESVEASRNFANKLWNAARFVMMNLDGKTPQELGNPSLDELELCDRWILSRFNQVVQQTRN 651

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            + +  +  A   +   +     D Y +  K     K               V+  +  L
Sbjct: 652 YIDHYGLGEAAKGLYEFIWGDFCDWYIELVKSRLFNKELSSSRIVAQQTLAFVLDGILKL 711

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+ IL
Sbjct: 712 LHPFMPHITEEIWQIL 727



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 23/173 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    +           H+GHA+   + D L R+HR+ G D L   G D     +    
Sbjct: 38  KKPAYSLVIPPPNVTGSLHMGHAFNTALIDTLVRYHRMCGYDTLCLPGIDHASIAVQTIL 97

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRH 102
           +                        +  Q+     +    L +S D     F  T ++  
Sbjct: 98  EKQLKAEGKTRYDIGREKFLERAWQWKQQSGGTIINQLKRLGLSADWSRQRF--TLDESL 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQH 154
               +  +  + + G IY+G Y   +    ++  +D EV  K  DG  ++ ++
Sbjct: 156 SKAVKTAFVTLYEAGLIYRGNYLVNWCPETQSAVSDLEVESKEVDGHLWHFRY 208


>gi|282896678|ref|ZP_06304686.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Raphidiopsis
           brookii D9]
 gi|281198396|gb|EFA73284.1| Valyl-tRNA synthetase  (Valine--tRNA ligase) (ValRS) [Raphidiopsis
           brookii D9]
          Length = 1045

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 148/396 (37%), Gaps = 54/396 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    DK L + +         +R  +V       L+D  +SR+ + 
Sbjct: 370 PVEPLLSTQWFVKIRPLADKTLEFLDQENSPEFVPQRWGKVYRDWLVNLRDWCISRQLWW 429

Query: 216 ---------------------------------------WG--IKIPDDPQYIMYVWIDA 234
                                                  WG  +++  DP  ++  W  +
Sbjct: 430 GHQIPAWYAVSETGGEITDSTPYFVAHNETEALEKARSQWGENVQLIQDPD-VLDTWFSS 488

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ +        ++P    V G DI+ F    +   A   +  +P       
Sbjct: 489 GLWPFSTLGWPEKTP-DFDAYYPTTTLVTGFDIIFFWVARMTMMAGHFTGKMPFQTVYIH 547

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI-ACGKDGFYDKDGLK-KRV 350
                   +K+SKS  N IDP+ +I++ G DALRY LV+E+   G+D   + D  K + V
Sbjct: 548 GLVRDENKQKMSKSANNGIDPLLLIDKYGTDALRYTLVKEVVGAGQDIRLEYDRKKDESV 607

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQ 406
           + + +    N +  +   ++ + DG  P     P     SD  ILS   +V+++    + 
Sbjct: 608 SVEASRNFANKLWNAARFVMMNLDGQTPEQLGEPQGIELSDRWILSRYHQVVKQTNNYID 667

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           N  +  A   +   +     D Y +  K       +P    T   +   ++  +  LL  
Sbjct: 668 NYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQNNADPVSRKTAQQILASILSGVLKLLHP 727

Query: 465 FVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFML 499
           F+P +  +I+  L   + +N+ F +L    +    L
Sbjct: 728 FMPHITEEIWQTLTQQSIDNQQFLALQSYPEADDKL 763



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 18/154 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              +           H+GHA+E  + D L R+HR+ G + L+  GTD     +    +  
Sbjct: 56  PYCVVIPPPNVTGSLHMGHAFESALIDALVRYHRMKGRNTLWLPGTDHASIAVQTILEKQ 115

Query: 66  GVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
             +                   +  ++     +    L +S D      T ++       
Sbjct: 116 LKSEGKNRYELGRDKFLERAWQWKAESGGTIINQLRRLGVSVDWSRERFTLDEGLSKAVL 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + K+ ++G IY+  Y   +    ++  +D EV
Sbjct: 176 EAFIKLYEEGLIYRSNYLVNWCPASQSAVSDLEV 209


>gi|253581500|ref|ZP_04858725.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836570|gb|EES65105.1| valyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 886

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/388 (20%), Positives = 153/388 (39%), Gaps = 13/388 (3%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            +     + G  Y+        +  + +   + + + A     N +   +    E+ Y+ 
Sbjct: 334 KIENIKHNVGQCYRCQTVVEPRVSKQWFVKTETLAQKALEVVKNGEIKIMPKRMEKIYYN 393

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
            L   +D  +S        I      ++ I   +   +   ++ K +   + +  +   +
Sbjct: 394 WLENIRDWCISRQLWWGHRIPAWYGPDKYIFVARDENEAKEMAVKHYGKEVDLIQEED-V 452

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           +  W  +     +T G+ +        F+P    V G DI+ F       F L     +P
Sbjct: 453 LDTWFSSALWPFSTMGWPEKTK-ELETFYPTSTLVTGADIIFFWVARMIMFGLYEMKEIP 511

Query: 288 -KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            K VF HG +  + G K+SKSLGN  DP+ +I+E G DA+R+ ++   + G+D  + +  
Sbjct: 512 FKDVFFHGIVRDEIGRKMSKSLGNSPDPLNLIDEFGADAIRFSMIYNTSQGQDVHFSEKL 571

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRE 403
           L+  +  + AN I N V+R V M L+ +D              D+ I S  +   +E+ +
Sbjct: 572 LE--MGRNFANKIWN-VARFVIMNLEGFDVKSVNKEELKLELVDKWIFSRMNETSKEVAD 628

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
            +    +  A   V   +     D Y +  K          +AS  T  YV   V+    
Sbjct: 629 YIDKFQLDDAAKAVYEFLRGDFCDWYVELAKVRLYNDDEAGKASKVTAQYVLWTVLESGL 688

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQ 487
            +L  F+P +  +I+  + V  ++   Q
Sbjct: 689 RMLHPFMPFITEEIWQKIKVKGDSIMIQ 716



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GH     I D L R+ R+ G + L+  G D  G      
Sbjct: 33  EGKESYSIVIPPPNVTGILHMGHILNNSIQDTLVRYKRMCGYNTLWLPGCDHAGIATQNK 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + +++          +  S  +D    T ++   
Sbjct: 93  VERKLAEEGLKKEDLGRDKFIEETWKWKEKHGGIITTQLRKIGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  + + G IY+G Y   +  R      DDEV       +      PV+  +E
Sbjct: 153 KAVREIFVHLYNDGLIYQGEYMVNWCPRCGTALADDEVEHVEKDGHLWHVKYPVKDSDE 211


>gi|282866707|ref|ZP_06275747.1| valyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282558406|gb|EFB63968.1| valyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 809

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/378 (19%), Positives = 138/378 (36%), Gaps = 39/378 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E   +        L+D  
Sbjct: 364 HCSRCSTTVEPRLSLQWWVKVETLAKAAGDAVRDGRVAIHPKE-MEQRYFDWVDNLRDWC 422

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P+                       ++  W  +     +T G+
Sbjct: 423 ISRQ-LWWGHRIPVWYGPEGEVVCVGPDEQPPSGEGWTQDTDVLDTWFSSGLWPFSTLGW 481

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +     K KF+P D+ + G DI+ F     + +  +++    P      +      +G+
Sbjct: 482 PEQTPDLK-KFYPTDVLLTGHDIIFFWVARMMMFGLYVMDGEAPFKTIALTGLVRDERGK 540

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP++ ++  G DA+R+ L +    G D    +D ++   N   AN I N 
Sbjct: 541 KMSKSFGNVVDPLDWMDTYGSDAVRFTLAKGANPGTDVPIGEDWVQASRN--FANKIWN- 597

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M      G +P     + +D  ILS  ++ + E      +    +    +    
Sbjct: 598 ATRFALMNGATVKGELPPVEQLSATDRWILSRLNKTVAEADAYYDDFQFAKLSEALYHFA 657

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K         ++A     V  EV+  +  LL   VP +   ++  L  
Sbjct: 658 WDEVFDWYVELSKTTFFAGG--EQAKVSGRVLGEVLDVMLRLLHPIVPFVTETLWTTL-T 714

Query: 480 ADENRCFQSLDQRLK-PG 496
            +E+       + +  PG
Sbjct: 715 GEESVVVADWPKAVTVPG 732



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA++  + D L R  R+ G + L+  G D  G      
Sbjct: 55  SEKPPYTIVIPPPNVTGSLHLGHAFQHTLMDALTRRKRMQGYESLWLPGMDHAGIATQNK 114

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + +  +     R + D +D S + F  T ++ 
Sbjct: 115 VEQQLGEEGKSRHDLGREEFVERVWQWKEEYGGKILGQMRRLGDGVDWSRERF--TMDEG 172

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D G IY+      +  R     +D EV    D
Sbjct: 173 LSAAVQTVFKKMYDDGLIYRAERIINWCPRCLTAISDIEVDYQDD 217


>gi|257452225|ref|ZP_05617524.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058768|ref|ZP_07923253.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684444|gb|EFS21279.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 887

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 143/385 (37%), Gaps = 11/385 (2%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + +   + G  Y+        +  + +     + + A     N Q   +    E+ Y+ 
Sbjct: 334 KIEELNHNVGQCYRCSTVVEPRVSKQWFVKTKPLAEKAIEVVRNGQVKIMPKRMEKIYYS 393

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
            +   +D  +S        I      +E +       +    ++  +   +++  +   +
Sbjct: 394 WMENIRDWCISRQLWWGHRIPAWYGPDEHLFVAMDEAEAKEQAKLHYGKEVELRQEED-V 452

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ +        ++P    V G DI+ F    +         ++P
Sbjct: 453 LDTWFSSALWPFSTMGWPEKTK-ELELYYPTSTLVTGADIIFFWVARMIMFGLYEMKDIP 511

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                F        G K+SKSLGN  +P+++I++ G DA+R+ ++   + G+D  + +  
Sbjct: 512 FHNVFFHGIVRDDLGRKMSKSLGNSPNPLDLIDQYGADAIRFSMIYNTSQGQDVRFSEKL 571

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRE 403
           L+  +  + AN I N  SR V M L+D+D          +   DE I+S      + +  
Sbjct: 572 LE--MGRNFANKIWN-ASRFVMMNLEDFDINTFDVKEVKYELVDEWIISRLQETAKAVET 628

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            + N  +  A   V   +     D Y +  K       +     T  YV   ++     L
Sbjct: 629 RLANFQLDDAAKAVYEFLRGDFCDWYVEIAKIRLYNLEDVQSKRTAQYVLWSMLESGLRL 688

Query: 462 LQAFVPKLANKIFDILFVADENRCF 486
           L  F+P ++ +I+  +   D     
Sbjct: 689 LHPFMPYISEEIWQSIKKEDAGETI 713



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GH     I D L R+ R+ G + L+  G D  G      
Sbjct: 33  EGKENYSIVIPPPNVTGILHMGHVLNNSIQDTLVRYQRMTGKNTLWLPGCDHAGIATQNK 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T  + +++          L  S  +D    T ++   
Sbjct: 93  VERKLKEEGLTKEDLGREEFLKRTWEWKEEHGGIITTQLRKLGASLDWDRERFTMDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  +   G IY+G Y   +         DDEV       +      PV+  EE
Sbjct: 153 HAVRKIFVDLYKDGLIYQGEYMVNWCPSCGTALADDEVDHEESHGHLWHLKYPVKDSEE 211


>gi|257125348|ref|YP_003163462.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049287|gb|ACV38471.1| valyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 881

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/390 (19%), Positives = 145/390 (37%), Gaps = 44/390 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    ++ ++      +F ++     + L   ++    I P  R  +V       ++D +
Sbjct: 345 HCYRCNSVIEPRVSTQWFVKMEPLAKRALEVVKNGKIQITPK-RWEKVYYNWLENIRDWT 403

Query: 209 LSRKTFDWGIKIP--------------------------------DDPQYIMYVWIDALT 236
           +SR+   WG +IP                                 +   ++  W  +  
Sbjct: 404 ISRQ-IWWGHRIPAYYSEDGTVFVAKSLEEAKIQAREKFGKDVNLTEETDVLDTWFSSAL 462

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +T G+ +  +  K KF+P +  V G DIL F    +   +  +   +P         
Sbjct: 463 WPFSTLGWPNETEDLK-KFFPTNALVTGADILFFWVARMVMMSLYIKDEIPFNYVYLHGI 521

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               KG K+SKSLGN  DP+++I + G DA+R+  +   + G+D  + +  L+  + +  
Sbjct: 522 IRDEKGRKMSKSLGNSPDPLDLIAKYGADAIRFSFLYNTSQGQDIHFSEKLLE--MGSAF 579

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN + N  SR V   L+D+D             D+ ILS      + I ENM+   +  A
Sbjct: 580 ANKVWN-ASRFVLSNLEDFDVSTTVDKSELKLEDKWILSKLQTASKLINENMEKYELDAA 638

Query: 414 LAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
                        D Y +  K     +   D+     +V   V+ +   +L  F+P +  
Sbjct: 639 AKLTYEFFRGDFCDWYVEIAKTRVYGQEGSDKV-VAQWVLRHVLDKGLKMLHPFMPFITE 697

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +I+  L   +E        +  K    +  
Sbjct: 698 EIWQKLQTGEETIMLSDFPKEEKEFINIEA 727



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I+          H+GH     I D + R+ R+ G D L+  G D  G       
Sbjct: 35  EKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRYKRMSGFDTLWIPGMDHAGIATQNKV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     T  + +++          L +S D      T ++   +
Sbjct: 95  ERMLADEGTSKEEIGYDEFLRRTWEWKEKHGGLITKQLRKLGVSLDWTRERFTMDEGLSE 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             + ++ K+ + G IY+G Y   +   D+    DDEV              P++  +EE
Sbjct: 155 AVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHEDKNGKIWEIRYPIKDSDEE 213


>gi|307328450|ref|ZP_07607625.1| valyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306885862|gb|EFN16873.1| valyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 877

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/358 (19%), Positives = 130/358 (36%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P +  ++        L D  
Sbjct: 357 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPED-MSKRYFDWVDNLHDWC 415

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 416 ISRQ-LWWGHRIPVWYGPNGEVVCVGPNEEPPSGEGWHQDSDVLDTWFSSGLWPFSTLGW 474

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S  KF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 475 PEQTE-SMEKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 533

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ ++  G DA+R+ L R    G D    +D ++   N   AN I N 
Sbjct: 534 KMSKSFGNAVNPLDWMDTYGSDAVRFTLARGANPGVDVPIGEDWVQASRN--FANKIWN- 590

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P P   + +D  ILS  + V+ E+    ++    +    +    
Sbjct: 591 ATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVAEVDAYYEDYQFAKLSDVLYHFA 650

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K     K   + A     V  EV+     LL   VP +  K++  L
Sbjct: 651 WDEVFDWYVELSKT-TFAKGGAE-ADAARRVLGEVLDVTLRLLHPVVPFVTEKLWTSL 706



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++E   I           H+GHA+E  I D L R  R+ G + L+  G D  G      
Sbjct: 48  SDKEPYAIVIPPPNVTGSLHLGHAFEHTIIDALTRRKRMQGFETLWQPGMDHAGIATQNV 107

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  + + F  T ++ 
Sbjct: 108 VERELAKEGVSRHDLGREAFVERVWQWKGESGGQISGQMRRLGDGVAWNRERF--TMDEG 165

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ +   IY+      +  R     +D EV    D
Sbjct: 166 LSKAVQTIFKRLYEDELIYRAERIINWCPRCLTAISDIEVEYDDD 210


>gi|258591433|emb|CBE67734.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [NC10 bacterium 'Dutch
           sediment']
          Length = 938

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 138/421 (32%), Gaps = 40/421 (9%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYN----------------DDEVYKGADGQYYNAQHN 155
            +   G  Y+        L  + +                     V +  +  Y++   N
Sbjct: 358 HLHALGKCYRCRSVVEPFLSTQWFVKVKPLAEPAIRAVEEGKTRFVPEHWENTYFSWMRN 417

Query: 156 PVQWMEEEG---------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
              W              ++ +     + L    E       P       +         
Sbjct: 418 IKDWCISRQLWWGHQIPAWYCKGCDKGNILRGRIEVGVGTRPPTSSDEAFVFIAPEAQPI 477

Query: 207 LSLSRKT--FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +S  R       G         ++  W  +     +T G+ +  +  + +F+P    V  
Sbjct: 478 VSAERPAGCPRCGHHELVQDPDVLDTWFSSALWPFSTMGWPEQTELLR-RFYPTSTLVTS 536

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+ F    +         ++P  +          +G+K+SKS GNVIDP+E+I+  G 
Sbjct: 537 FDIIFFWVARMMMMGLKFMGDVPFREVYIHALVRDAEGQKMSKSKGNVIDPLEIIDRYGA 596

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPT 379
           DA R+ L    A G+D    ++ ++        N + N    ++R + ++      +   
Sbjct: 597 DAFRFTLAALAAQGRDIRLSEERIEG--YRHFCNKLWNAHQFLNRYLPLLEGPLPPVNSL 654

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
               T  D  +L     ++  + + ++    + A + +   V     D Y +  K     
Sbjct: 655 SLDLT--DRWLLHRLHALIGSVTKALEEYRFNEAASALYQFVWHEYCDWYLEIVKSRLTS 712

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           +++ ++  T + +    +     LL  F+P +  +I+  L     +       +   PG+
Sbjct: 713 ESSLEQRRTGVALLCLGLDTALRLLHPFMPFITEEIWQQLPQHGTSLMVAEWPKA-DPGW 771

Query: 498 M 498
            
Sbjct: 772 Q 772



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 18/158 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           HIGHA    + D+L R+ R+ G + L+  GTD  G       +
Sbjct: 41  RPPYAIVIPPPNITGFLHIGHAMNNTLQDILIRWRRMQGYNALWLPGTDHAGIATQNVVE 100

Query: 64  NAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   +  ++          L  S D      T ++   + 
Sbjct: 101 RQLQGEGRRREDLGRTGFVDRVWRWKAESGGTIIRQLKRLGASCDWERECFTMDEDRQEA 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            R ++ ++ D+G IY+G     +  R +   +D EV  
Sbjct: 161 VREVFVRLYDEGLIYRGERLINWCPRCQTALSDIEVEY 198


>gi|262039366|ref|ZP_06012679.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746628|gb|EEY34154.1| valine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 883

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 137/382 (35%), Gaps = 42/382 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +     + ++      +F ++    ++ L   ++    I P +R  +V       ++D +
Sbjct: 345 HCYRCDSVIEPRVSTQWFVKMQPLAERALEVVKNGQVKITP-QRWEKVYYNWLENIRDWT 403

Query: 209 LSRKTFDWGIKIP--------------------------------DDPQYIMYVWIDALT 236
           +SR+   WG +IP                                 +   ++  W  +  
Sbjct: 404 ISRQ-IWWGHRIPAYYAEDGTVFVARDIEEAKAQARKKFGKDVDLREETDVLDTWFSSAL 462

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +T G+ +       KF+P D  V G DIL F    +   +  +   +P         
Sbjct: 463 WPFSTMGWPEKTK-DLEKFFPTDTLVTGADILFFWVARMIMMSLYIMDEIPFNYVYLHGL 521

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DP+ +I++ G DA+RY  +   + G+D  + +  ++  + +  
Sbjct: 522 IRDEIGRKMSKSLGNSPDPLNLIDKYGADAIRYSFLYNTSQGQDIHFSEKLME--MGSTF 579

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           AN I N+    +S +         T   F   D  ILS       +I E M    +  A 
Sbjct: 580 ANKIWNVSKFVLSNLEDFNTETSVTDLEFKLEDTWILSKLQSAAAKINEYMNGYELDNAA 639

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y +  K         D+  T  +V   V+     +L  F+P +  +
Sbjct: 640 KAVYEFFRGEFCDWYVEIAKTRVYGGEGTDKV-TAQWVLRHVLDSGLKMLHPFMPFITEE 698

Query: 473 IFDILFVADENRCFQSLDQRLK 494
           I+  L   +E        +  K
Sbjct: 699 IWQKLDFDEETVMLSDFPKEDK 720



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 18/167 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I           H+GH  +  I D + R+ R+ G D L+  GTD  G       
Sbjct: 35  EKPGYSIVIPPPNVTGILHMGHMLDNAIQDTIIRYKRMSGFDTLWVPGTDHAGIATQNKV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     T  + +++          L +S D      T ++    
Sbjct: 95  ERMLKDEGTSKEEIGREEFLKRTWEWKEKHGGLITKQLRRLGVSLDWSRERFTMDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
             + ++ K+ + G IY+G Y   +   D+    DDEV          
Sbjct: 155 AVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHVEKNGKIW 201


>gi|290960375|ref|YP_003491557.1| valyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260649901|emb|CBG73017.1| valyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 876

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 136/374 (36%), Gaps = 40/374 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P +  ++        + D  
Sbjct: 354 HCSRCKTTVEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPED-MSKRYFDWVDNMYDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY------------------------IMYVWIDALTNYLTTT 242
           +SR+   WG  I +   P                          ++  W  +     +T 
Sbjct: 413 ISRQ-LWWGHRIPVWYGPDGETVCVGPDEQPPGTEAEGWTQDTDVLDTWFSSGLWPFSTL 471

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHK 299
           G+ +  +  + KF+  D+ + G DI+ F     + +  + +   +P      +      +
Sbjct: 472 GWPEQTEDLR-KFYSTDVLLTGHDIIFFWVARMMMFGLYAMDGEVPFKTIALTGLVRDER 530

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GNV+DP++ +++ G DALR+ L R    G D    ++ ++   N   AN I 
Sbjct: 531 GKKMSKSFGNVVDPLDWMDKYGSDALRFTLARGANPGTDVPIGEEWVQASRN--FANKIW 588

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M     +G +P     + +D  IL+  +  ++++    ++    +    +  
Sbjct: 589 N-ATRFALMNGATVEGPLPEASKLSATDRWILARLNETVEQVDAYYEDYQFAKLSDALFH 647

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   D Y +  K        P   S    V  EV+     LL   VP + + ++  L
Sbjct: 648 FAWDEVFDWYVELSKTTFQAGGEPAEVS--KRVLGEVLDVTLRLLHPVVPFVTDTLWTTL 705

Query: 478 FVADENRCFQSLDQ 491
               E+       Q
Sbjct: 706 -TGGESLVIADWPQ 718



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA++  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPAYTIVIPPPNVTGSLHLGHAFQHTLMDALTRRKRMQGYESLWLPGMDHAGIATQNK 104

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + +  +     R + D +D   + F  T ++ 
Sbjct: 105 VEQQLAEEGKSRHDLGREEFVERVWQWKEEYGGKILGQMRRLGDGVDWDRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSKAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEHQED 207


>gi|300865838|ref|ZP_07110584.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300336162|emb|CBN55742.1| valyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 912

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 136/385 (35%), Gaps = 56/385 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    +  L + +   +      R  +V       +KD  +SR+   
Sbjct: 352 PVEPLLSTQWFVKIQPLSETALEFLDKENQPEFIPARWTKVYRDWLVKIKDWCISRQ-LW 410

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +KI  DP  ++  W  
Sbjct: 411 WGHQIPAWYAISETGGEITDSTPFVVARNQAEAEEKAQAKFGENVKIEQDPD-VLDTWFS 469

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +      A+++P      G DI+ F    +   A   +  +P      
Sbjct: 470 SGLWPFSTMGWPEETQ-DLARYYPNTTLSTGFDIIFFWVARMTMMAGHFTGKMPFKTVYI 528

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG-LKKR 349
               +   G+K +K+ GN IDP+ +I + G DALRY L+RE A  G+D   D +   ++ 
Sbjct: 529 HGLMLDENGKKQAKTAGNGIDPLILINKYGTDALRYALMRETAGAGQDVRLDYNRKTQES 588

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIREN 404
              + +    N +  +   ++   +G  P             D  ILS   + ++  R  
Sbjct: 589 ATVEASRNFTNKMWNAARFVMISLEGKTPQQLGAPVEGLELCDGWILSRYHQTVEATRNY 648

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++N  +  A   +   +     D Y +  K   L   +P     V      V+  +  LL
Sbjct: 649 IENYGLGEAAKGLYEFIWGDFCDWYIELVKSRLLPDADPTSKQVVQQTLAYVLEGILKLL 708

Query: 463 QAFVPKLANKIFDILFVADENRCFQ 487
             F+P +  +I+  L    E  C  
Sbjct: 709 HPFMPHITEEIWHTLTQKGEEECLA 733



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I           H+GHA+   + D L R+HR+ G + L   GTD     +   
Sbjct: 34  KGGEPYCIIIPPPNVTGSLHMGHAFNNSLIDALIRYHRMKGDNTLCLPGTDHASIAVQTI 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++     +    L +S D      T ++   
Sbjct: 94  LEKQLKAEGKTRYDLGREKFLEKAWQWRAESGGTIVNQLRRLGLSADWSRERFTMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 + ++ ++G IY+G Y   +    ++  +D EV              P+
Sbjct: 154 KAVLEAFIRLYEEGLIYRGNYLVNWCPASQSAVSDLEVENKEVNGNLWHFRYPL 207


>gi|33864455|ref|NP_896015.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33641235|emb|CAE22365.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 947

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 132/398 (33%), Gaps = 27/398 (6%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + +       +             +     V       Y +       W      ++   
Sbjct: 390 EPLLSTQWFVRMEPLAARCHECLDHGAPRFVPNRWQKVYRDWLTEIRDWCISRQLWWGHR 449

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                ++S  +       P           +S  +    +R  F   + I  D   ++  
Sbjct: 450 IPAWFVVSETDDQLTDATP-------YLVARSEEEAWQQARDQFGEAVVIQQDED-VLDT 501

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D        ++P    V G DI+ F    +   A   +  +P   
Sbjct: 502 WFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIFFWVARMTMMAGAFTGRMPFAD 561

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK 347
                     +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D   
Sbjct: 562 VYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKS 621

Query: 348 K-RVNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQE 400
                 + A    N +  +    L +  G  P       P +   +D  ILS  +R+ ++
Sbjct: 622 DTSATVEAARNFANKLWNATRFALMNLGGETPASLGEPDPASLQLADRWILSRLARMNRD 681

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVE 453
           + E   +  +  A   +         D Y +  K       +          T   V  +
Sbjct: 682 VVERYDSYRLGEAAKCLYEFAWNDICDWYLELSKRRLHPGEDASGEVLADQCTARQVLAK 741

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSL 489
           V+  L ++L   +P L+ +++  L  A  D     QS 
Sbjct: 742 VLADLLVMLHPLMPHLSEELWHGLTGAPKDTFLALQSW 779



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 68  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTILEK 127

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  + +++     D    L  S D     F  T ++    
Sbjct: 128 QLKAEAISRYDLGREAFLERAWAWKEESGGRIVDQLRRLGYSVDWQRQRF--TLDEGLSA 185

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R  + ++ ++G IY+G Y   +     +  +D EV       +      P+
Sbjct: 186 AVREAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHLRYPL 238


>gi|114707214|ref|ZP_01440112.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Fulvimarina
           pelagi HTCC2506]
 gi|114537410|gb|EAU40536.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Fulvimarina
           pelagi HTCC2506]
          Length = 965

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 131/355 (36%), Gaps = 45/355 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          ++  +      +P +  N    +++  ++   +SR+   W
Sbjct: 438 IEPMLTDQWFVDAETLAKPAITSVKEERTKFVPKQWENTYFRWMED-IQPWCISRQ-LWW 495

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 496 GHRIPAWYGPDGKVFVARTEADAIRAAEGHYGSQVELVRDEDVLDTWFSSALWPFSTMGW 555

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GE 301
                    K++P  +     DI+ F    +       +   P    V+ H  +  K G+
Sbjct: 556 PHETP-EMEKYYPTSVLSTAFDIIFFWVARMMMMGLHFTGKEPF-HTVYMHPLVRDKFGQ 613

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP+++IEEVG DALR+ L      G+D   D   +      +    + N 
Sbjct: 614 KMSKSKGNGIDPLDLIEEVGADALRFTLAALAVQGRDVKLDPARVAG--YRNFCTKLWN- 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M    +   I         +  I++  S+  +E    ++    + A A +   V
Sbjct: 671 ATRFAQMNEAKHGVDIEPASLQLPINRWIVTELSKAEKEATAALEAYRFNDAAAILYRFV 730

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                D Y +  KP  L   + D A  V  VT  V+ ++ +LL  F+P +  +++
Sbjct: 731 WNLFCDWYVELTKP-TLNGEDADAAGEVRVVTGFVLDRIFVLLHPFMPFITEELW 784



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 24/189 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA    + D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  PAFSIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGTDHAGIATQMVVER 95

Query: 65  AG----------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                                           + S   + +   LD S + F  T ++  
Sbjct: 96  QMAASGESQTRREMGREKFVERIWQWKAESGGKISEQLKRLGASLDWSRERF--TMDEGL 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +    ++ ++ ++G IY+      +    +   +D EV       +      P+   E 
Sbjct: 154 SEAVLEVFVRLYEEGLIYRDKRLVNWDPHFQTSISDLEVESREVEGHMWHFKYPLAGGET 213

Query: 163 EGYFFRLSA 171
             Y  +   
Sbjct: 214 YEYVEKDED 222


>gi|90101542|sp|Q7TUI9|SYV_PROMM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 929

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 132/398 (33%), Gaps = 27/398 (6%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + +       +             +     V       Y +       W      ++   
Sbjct: 372 EPLLSTQWFVRMEPLAARCHECLDHGAPRFVPNRWQKVYRDWLTEIRDWCISRQLWWGHR 431

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                ++S  +       P           +S  +    +R  F   + I  D   ++  
Sbjct: 432 IPAWFVVSETDDQLTDATP-------YLVARSEEEAWQQARDQFGEAVVIQQDED-VLDT 483

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D        ++P    V G DI+ F    +   A   +  +P   
Sbjct: 484 WFSSGLWPFSTMGWPDQESADLECWYPTSTLVTGFDIIFFWVARMTMMAGAFTGRMPFAD 543

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK 347
                     +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D   
Sbjct: 544 VYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKS 603

Query: 348 K-RVNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQE 400
                 + A    N +  +    L +  G  P       P +   +D  ILS  +R+ ++
Sbjct: 604 DTSATVEAARNFANKLWNATRFALMNLGGETPASLGEPDPASLQLADRWILSRLARMNRD 663

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVE 453
           + E   +  +  A   +         D Y +  K       +          T   V  +
Sbjct: 664 VVERYDSYRLGEAAKCLYEFAWNDICDWYLELSKRRLHPGEDASGEVLADQCTARQVLAK 723

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSL 489
           V+  L ++L   +P L+ +++  L  A  D     QS 
Sbjct: 724 VLADLLVMLHPLMPHLSEELWHGLTGAPKDTFLALQSW 761



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 50  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTILEK 109

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  + +++     D    L  S D     F  T ++    
Sbjct: 110 QLKAEAISRYDLGREAFLERAWAWKEESGGRIVDQLRRLGYSVDWQRQRF--TLDEGLSA 167

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R  + ++ ++G IY+G Y   +     +  +D EV       +      P+
Sbjct: 168 AVREAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHLRYPL 220


>gi|15606596|ref|NP_213976.1| valyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226195|sp|O67411|SYV_AQUAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
            ligase; Short=ValRS
 gi|2983819|gb|AAC07375.1| valyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 1165

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/332 (21%), Positives = 130/332 (39%), Gaps = 20/332 (6%)

Query: 177  LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            L   + +P  +L        I    S  K   +  +    G +  +  + ++  W  +  
Sbjct: 674  LFTQDMNPMAMLTPGVSTRNIYKYDSQKKKWKMVLRCKKCGSENLEQERDVLDTWFSSAL 733

Query: 237  NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
                  G+ ++ +  K   +P DL V G DI+ F    +         ++P    V+ H 
Sbjct: 734  WPFGVFGWPESTEDLK-NLYPTDLLVTGFDIIFFWVARMIMMGTHFMKDIPFYD-VYVHA 791

Query: 295  FILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +  K G K+SK++GNVIDP+++IE  G DALR+ L      G+D    ++  +      
Sbjct: 792  LVRDKYGRKMSKTIGNVIDPLDIIERYGADALRFTLAILTVQGRDIKLAEEKFEG--YKH 849

Query: 354  LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             AN I N     +    +D+   IP        D+ I++  +   +E+ + ++N    +A
Sbjct: 850  FANKIWNAARYVLMNTPEDFIARIPYMAPLKPEDKWIITKLNETAEEVNKALENYQYSQA 909

Query: 414  LAQVISLVS--EVDRYFDAQKPWELKK----TNPDRAS------TVLYVTVEVIRQLAIL 461
               +         D Y +  K    KK       ++A       T LY    V+ +   +
Sbjct: 910  AHAIYEFFWSDYCDWYIEFTKERIYKKAPEDNEEEKAKVENERTTALYTLHYVLEKALRI 969

Query: 462  LQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
            L  F+P +  +++  L     E+       Q+
Sbjct: 970  LHPFMPYITEELWHKLPNAEGESISLAEFPQK 1001



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           +R+K  +           H+GHA    + DV+ R+ R+ G + ++  G D  G       
Sbjct: 32  KRKKFSVVIPPPNVTGSLHMGHALNATLQDVIVRWQRMRGRECVWVPGFDHAGIATQYVV 91

Query: 59  ------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        +V ++    R     L +S D      T ++    
Sbjct: 92  EKQLAKEGKSRLELGREEFLKKVWEWVPKSRNAIRTQLTKLGVSVDWKRERFTLDEGFSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  ++ + ++G IY+  Y   +   D    +D EV    +         P+     + 
Sbjct: 152 AVRKAFRTLFEEGLIYRAEYIVNWCPNDRTALSDLEVEYEEEKGSLWYIKYPIVDENGKD 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               ++    +  +        + P + R + +   ++ L  ++  RK   
Sbjct: 212 TGEFITVATTRPETMLGDTAVAVNPNDDRYKHLVGKRARLPLVNWERKDLR 262


>gi|253701290|ref|YP_003022479.1| valyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776140|gb|ACT18721.1| valyl-tRNA synthetase [Geobacter sp. M21]
          Length = 888

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 140/365 (38%), Gaps = 47/365 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ +++   ++ L   +     I+P +  N    +++  ++D  +
Sbjct: 347 CYRCKTVVEPYMSLQWYVKVAPLAERALGAVKDGRTKIVPQQWENTYYDWME-NIRDWCI 405

Query: 210 SRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTT 242
           SR+ +                             G         ++  W  +     +T 
Sbjct: 406 SRQIWWGHRIPAWYCDHCGHITVAKDDPTCCDECGSDEIRQETDVLDTWFSSALWPFSTM 465

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298
           G+ +      A F+P    V G DIL F    W A ++   L    +V      +H    
Sbjct: 466 GWPEKTP-ELASFYPTSCLVTGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVR 520

Query: 299 --KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K+SKS GNVIDP+ VI+  G DA R+ L    A G+D    ++ +      + AN
Sbjct: 521 DAQGQKMSKSKGNVIDPLTVIDAYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFAN 578

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N  SR   M L+ +D     P     + +D  IL   ++    +   + +   + A 
Sbjct: 579 KIWN-ASRFAMMNLEGFDPNAVDPASLKLSNADRWILYRLNQTTVSVDAALASFRFNEAA 637

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +         D Y +  K  +L K + DR ++  YV   V+  L  LL  F+P +  +
Sbjct: 638 NDLYRFTWSEFCDWYIELAKD-DLYKGDADRQASAKYVLWLVLENLLRLLHPFMPFITEE 696

Query: 473 IFDIL 477
           I+  L
Sbjct: 697 IWQAL 701



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 35  SDKPGYSIVIPPPNITGVLHMGHALNNTLQDILCRWKRMAGYNVLWMPGTDHAGIATQNV 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++          L  S D      T +    
Sbjct: 95  VERQLAAEGKDRFELGREAFIERVWQWKGESGGQIIGQLKRLGASCDWERERFTMDAGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ ++  +  IY+      +  R     +D EV       +      PV
Sbjct: 155 KAVREVFVRLYQEKLIYRDNRLINWCPRCHTALSDIEVEHEEKAGHLWHLRYPV 208


>gi|219846966|ref|YP_002461399.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541225|gb|ACL22963.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 922

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/354 (22%), Positives = 138/354 (38%), Gaps = 40/354 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  E +F R     +  ++        I+P  R  +V       ++D  +SR+   W
Sbjct: 378 IEPLLSEQWFVRTKPLAELAIAAVRDGRVRIVPE-RFEKVYFHWLEHIEDWCISRQ-LWW 435

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I +   P                      ++  W  +     +T G+ D+ D    +
Sbjct: 436 GHRIPVWYLPDGSIVVPGSDEPPPAEGVQDPDVLDTWFSSGLWPFSTLGWPDDTD-DYRR 494

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F+P  +   G DIL F    +      L+   P              G K+SKS GNV++
Sbjct: 495 FYPTSVMETGYDILFFWVARMMMMGCYLTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVN 554

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--L 370
           P+EV+E+ G DALRY LV     G+D   +   ++   N   AN I N+    +  +  L
Sbjct: 555 PLEVVEQYGSDALRYTLVTSGTPGQDVNLNPQRIEAARN--FANKIWNITRFVIGKLGDL 612

Query: 371 KDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
              D +  TP       FT +D  ILS  + ++ E+   M+      A  Q+   +    
Sbjct: 613 PRTDSVKITPEILHREEFTLADRWILSRYAYLVAEVDRLMEGYNFGEAGRQMHDFLWGEF 672

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K     + +  RA+    V   V+     LL  F+P +  +++  L
Sbjct: 673 ADWYVEIAK--VQLEGDAQRANLTRRVLFTVLDGSLRLLHPFMPFVTEEVWQYL 724



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 22/191 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    IS        + H+GHA  + I D++ R+ R+ G   L+  GTD  G       +
Sbjct: 43  RPPFVISIPPPNVTGELHLGHAMFVAIEDLMIRWRRMQGYQTLWVPGTDHAGIATQTQVE 102

Query: 64  N-------------------AGVTTKV-FVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                    K  +  + +R  R +    D S + F  T +    
Sbjct: 103 KLLEREGTSRQAVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWSRERF--TLDPGLS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                 +K++ D G IY+G Y   +S + +   +D EV              P++     
Sbjct: 161 RAVHTAFKRLYDDGLIYRGIYLVNWSPKLQTAVSDLEVEYEERNVSIWYVCYPIRTATWT 220

Query: 164 GYFFRLSAYQD 174
           G      + Q 
Sbjct: 221 GPTAPWGSGQW 231


>gi|197117918|ref|YP_002138345.1| valyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197087278|gb|ACH38549.1| valyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 888

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 141/369 (38%), Gaps = 47/369 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ +++   ++ L   +     I+P +  N    +++  ++D  +
Sbjct: 347 CYRCKTVVEPYMSLQWYVKVAPLAERALGAVKDGRTKIVPQQWENTYYDWME-NIRDWCI 405

Query: 210 SRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTT 242
           SR+ +                             G         ++  W  +     +T 
Sbjct: 406 SRQIWWGHRIPAWYCDHCGHITVAKEDPTCCDECGSDEIRQETDVLDTWFSSALWPFSTM 465

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298
           G+ +      A F+P    + G DIL F    W A ++   L    +V      +H    
Sbjct: 466 GWPEKTP-ELASFYPTSCLITGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVR 520

Query: 299 --KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K+SKS GNVIDP+ VI+  G DA R+ L    A G+D    ++ +      + AN
Sbjct: 521 DAQGQKMSKSKGNVIDPLTVIDAYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFAN 578

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N  SR   M L+ +D     P     + +D  IL   ++    +   + +   + A 
Sbjct: 579 KIWN-ASRFAMMNLEGFDPNRVDPASLKLSNADRWILYRLNQTAVSVDAALGSFRFNEAA 637

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +         D Y +  K  +L K + DR ++  YV   V+  L  LL  F+P +  +
Sbjct: 638 NDLYRFTWSEFCDWYIELAKD-DLYKGDADRQASAKYVLWLVLENLLRLLHPFMPFITEE 696

Query: 473 IFDILFVAD 481
           I+  L   D
Sbjct: 697 IWQALPKKD 705



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 35  SDKPGYSIVIPPPNITGVLHMGHALNNTLQDILCRWKRMAGYNVLWMPGTDHAGIATQNV 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++          L  S D      T +    
Sbjct: 95  VERQLAAEGKDRFELGREAFIERVWQWKGESGGQIIGQLKRLGASCDWERERFTMDAGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ ++  +  IY+      +  R     +D EV       +      PV
Sbjct: 155 KAVREVFVRLYQEKLIYRDNRLINWCPRCHTALSDIEVEHEEKAGHLWHLRYPV 208


>gi|186684785|ref|YP_001867981.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186467237|gb|ACC83038.1| valyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 994

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 141/374 (37%), Gaps = 55/374 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F ++    D  L + +         +R  +V       LKD  +SR+   
Sbjct: 355 PIEPLLSTQWFVKIRPLADNTLEFLDQQTSPEFVPQRWTKVYRDWLVKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +K+  DP  ++  W  
Sbjct: 414 WGHQIPAWYAISETDGQITDNTPFVVAKSETEAWEKAKSQFGENVKLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +      A ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPEQTQ-DLATYYPTTTLVTGFDIIFFWVARMTMMAGHFTQQMPFQTVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
               +  KG+K+SK+ GN IDP+ +I++ G DALRY L+RE+A  G+D   + D  K + 
Sbjct: 532 HGLVLDEKGQKMSKTKGNGIDPLLLIDKYGTDALRYTLIREVAGAGQDIRLEYDRKKDES 591

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENM 405
            + + +    N +  +   ++ + DG  P     P A   SD  I+S   +V+++    +
Sbjct: 592 ASVEASRNFANKLWNAARFVMMNLDGQTPQQLGNPVATELSDRWIISRYHQVIKQTSNYI 651

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            N  +  A   +   +     D+Y +  K       +P            ++  +  LL 
Sbjct: 652 DNYGLGEAAKGLYEFIWGDFCDQYIELVKSRLQADADPVSRRVAQQTLGYILEGILKLLH 711

Query: 464 AFVPKLANKIFDIL 477
             +P +  +I+  L
Sbjct: 712 PLMPHITEEIWQTL 725



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K  E   I           H+GHA+E  + D L R+HR+ G + L+  GTD     +   
Sbjct: 37  KGGEPYCIVIPPPNVTGSLHMGHAFESALIDTLVRYHRMQGRNTLWLPGTDHASIAVHSM 96

Query: 59  -AKAAQNAGVTTKVFVDQNSRNFRDMADV----------------LDISYDDFIRTTEKR 101
             K  +  G T      +                           +D S + F  T ++ 
Sbjct: 97  LEKQLKKEGKTRYELGREKFLERAWQWKAESEGTILNQLRRLGVSVDWSRERF--TLDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
                   + ++ ++G IY+G Y   +    ++  +D EV  +  +G  ++ ++
Sbjct: 155 LSKAVVEAFTRLYEEGLIYRGEYLVNWCPASQSAVSDVEVENQEVNGNLWHFRY 208


>gi|322418887|ref|YP_004198110.1| valyl-tRNA synthetase [Geobacter sp. M18]
 gi|320125274|gb|ADW12834.1| valyl-tRNA synthetase [Geobacter sp. M18]
          Length = 888

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 139/369 (37%), Gaps = 47/369 (12%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ ++    ++ L+  +     I+P +  N    +++  ++D  +
Sbjct: 347 CYRCKTVVEPYMSLQWYVKVGPLAERALAAVKDGRTRIVPQQWENTYYDWME-NIRDWCI 405

Query: 210 SRKTFD---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTT 242
           SR+ +                             G         ++  W  +     +T 
Sbjct: 406 SRQIWWGHRIPAWYCDHCGHITVAKEDPTSCDQCGSDEIRQETDVLDTWFSSALWPFSTM 465

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH---- 298
           G+ +      A F+P    V G DIL F    W A ++   L    +V      +H    
Sbjct: 466 GWPEKTP-ELASFYPTSCLVTGFDILFF----WVARMMMMGLHFMDEVPFTDVYIHALVR 520

Query: 299 --KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G+K+SKS GNVIDP+ VIE  G DA R+ L    A G+D    ++ +      + AN
Sbjct: 521 DAQGQKMSKSKGNVIDPLTVIEAYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFAN 578

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I N  SR   M L+ +D           + +D  IL   +     +   +     + A 
Sbjct: 579 KIWN-ASRFAMMNLEGFDPNQVDAASLKLSNADRWILYRLNEAATSVDSALTGFRYNEAA 637

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +++         D Y +  K  +L K + +R +   YV   V+  L  LL  F+P +  +
Sbjct: 638 SELYRFTWSEFCDWYIELAKD-DLYKGDAERQAAAKYVLWLVLENLLRLLHPFMPFITEE 696

Query: 473 IFDILFVAD 481
           I+  L   D
Sbjct: 697 IWQALPKKD 705



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 53/179 (29%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 35  SDKPSYSIVIPPPNITGVLHMGHALNNTLQDILCRWKRMSGYNVLWMPGTDHAGIATQNV 94

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++          L  S D      T +    
Sbjct: 95  VERQLAAEGKDRFELGREGFIERVWQWKGESGGQIIGQLKRLGASCDWERERFTMDAGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++ ++  +  IY+      +  R     +D EV              PV   +E
Sbjct: 155 TAVREVFVRLYQEKLIYRDNRLINWCPRCHTALSDIEVEHEEKAGNLWHLRYPVVGTDE 213


>gi|171910094|ref|ZP_02925564.1| valyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 887

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/351 (19%), Positives = 129/351 (36%), Gaps = 33/351 (9%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E +F +  +          +        +R  +V      G++D  +SR+   
Sbjct: 361 PIEPRLSEQWFLKYPS--VPASQAVVAEGRMRFFPDRWAKVYDHWMGGIQDWCISRQ-IW 417

Query: 216 WGIKI--------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           WG ++                          ++  W  +      T G+    +  KA F
Sbjct: 418 WGHRVPVWYREGEVYCGETAPEGDGWTQDADVLDTWFSSWLWPFATMGWPKETNDLKA-F 476

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    +    +     +P     F+      +G K+SKSLGN  DP
Sbjct: 477 YPTTDLVTGPDIIFFWVARMIMAGYEWMGEMPFKNVYFTGIIRDKQGRKMSKSLGNSPDP 536

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +E+I + G DALR+ ++R    G D  +D+  ++  +  +    + N        +    
Sbjct: 537 LELISKFGADALRFGIMRSAPLGADVLFDEKNVE--LGRNFCTKLWNAAR--FRQMQGGA 592

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                 P   +  D+ IL+  S  +QE+   ++      A A +         D Y +A 
Sbjct: 593 SEGEIKPELLSSDDKWILARLSDAIQEVTTALEEYRFSDAAATLYRFFWSEYCDWYVEAT 652

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           K   L  ++  R +  L V   V+     L   F+P +  +++  +    E
Sbjct: 653 KA-VLNGSDEARKANTLAVMDFVLGHTLRLFHPFLPFITEELWQGMGFNKE 702



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 27/190 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++   Y I            +GH     I D+LAR  R+ G +VL+  GTD  G    
Sbjct: 34  VSDKRPAYSIVIPPPNVTGILTLGHVLNNTIQDILARRARMLGKEVLWLPGTDHAGIATQ 93

Query: 60  KAAQN----------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRT 97
              +                   +  K++  +        +  R +    D S   F  T
Sbjct: 94  NVVEKTLKKDGAIKHRDDLGREKMVEKIWEWKEKFGGIILKQLRALGASCDWSRTRF--T 151

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +      ++  + +KG IY+G     +        +D+EV       +       V
Sbjct: 152 MDEEYSKCVTKVFVDLYNKGLIYRGKRMVNWCPSALTALSDEEVEMRQQNGHLYYFK--V 209

Query: 158 QWMEEEGYFF 167
           + +EE G + 
Sbjct: 210 EVVEEPGTWL 219


>gi|323342873|ref|ZP_08083105.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463985|gb|EFY09179.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 861

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 146/360 (40%), Gaps = 34/360 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++    D++L++ +   +     ER     +     ++D  +SR+   W
Sbjct: 352 VEPYLSKQWFVKMKPLADEVLAHQQGDDKINFYPERFENTFTRWLDNIEDWCISRQ-LWW 410

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           + ++  W  +     +T G+ +N +    
Sbjct: 411 GHRIPAWFHKETEEIYVGLEAPEDIENWRQDEDVLDTWFSSALWPFSTLGWPENTE-DLE 469

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           +++P ++ V G DI+ F    + + A   + + P    +         G K+SKSLGN +
Sbjct: 470 RYYPTNVLVTGYDIIFFWVARMAFQARYFTNSRPFEDVLIHGLIRDQDGRKMSKSLGNGV 529

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP++VIE  GVDALRYFL      G+D  Y  + ++   N    N I N  SR V M ++
Sbjct: 530 DPMDVIETYGVDALRYFLTTNSTPGQDMRYMPEKVEASWN--FINKIWN-ASRFVLMHIE 586

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           D D         ++ D  I+   ++ L+E+  NM           +   V +     Y +
Sbjct: 587 D-DVYEIDKAQLSQVDRHIIHKFNQTLEEVSRNMDKYEFALVGNTLSRFVWDDFCSWYIE 645

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             K   L+  +             +++ + ILL  F+P +  +I+  L    E+   +S 
Sbjct: 646 LSKS-GLQSDDAQVVYATKATLSHMLKNILILLHPFMPFVTEEIYCALPNHLESINIESW 704



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    +         + H+GHA++  + D++ R+ RL G D L+  G D  G      
Sbjct: 33  TSKAPYSLVIPPPNVTGKLHLGHAWDNTLQDIIIRYQRLLGKDALYLPGMDHAGIATQAK 92

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     +  + D+ + + R+    L IS D      T ++  +
Sbjct: 93  VEQKMREQGISRYDLGREAFLDKSWEWKDEYAGHIREQWSKLGISVDYSRERFTLDEGLN 152

Query: 104 DTCRILWKKISDKGDIYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                ++  + + G I++      W      A  N + ++K  +G +Y   +  V+  E 
Sbjct: 153 QAVNKVFVDLYNDGLIFQGYRIINWDVEAQTALSNIEVIHKEVEGNFYTFDYTVVETGET 212


>gi|315927701|gb|EFV07030.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni DFVF1099]
          Length = 380

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 89/256 (34%), Positives = 143/256 (55%), Gaps = 6/256 (2%)

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+SKS GNV+ P EV
Sbjct: 1   PAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEV 60

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R + M  K   G 
Sbjct: 61  VDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMSTKYSQGN 120

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           I   G     +   L+     L    E ++N   +R L ++   +S  +      +PW L
Sbjct: 121 ISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAISKYEPWSL 179

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRL 493
            K N  ++A+ ++ +   ++ + ++LL   +PK + K+   L     +  +    LD  L
Sbjct: 180 IKENKHEQANALVALCANILAKTSLLLSPTLPKSSQKVALALNFEISSANYTKMILDNEL 239

Query: 494 KPGFMLHKTFDPIFPR 509
                     + +FP+
Sbjct: 240 L--DFKANPCEALFPK 253


>gi|256827322|ref|YP_003151281.1| valyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583465|gb|ACU94599.1| valyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 888

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/381 (16%), Positives = 129/381 (33%), Gaps = 43/381 (11%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             D               HN ++    E +F  +   +       E       P  R  +
Sbjct: 338 LLDHVEDHTHSVMTCYRCHNKLEPWLSEQWFVAVDGLKKDAARVVEDGSITFHPA-RWKQ 396

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPD---------------------------DPQYIM 228
           V     + LKD  +SR+   WG +IP                              + ++
Sbjct: 397 VYLDWLANLKDWCISRQ-LWWGHRIPMFYCDACGWQDACVEDISTCPECGSVVRQDEDVL 455

Query: 229 YVWIDALTNYLTTTGYLDN--PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
             W  +      T G+           + +P  +    +DI+      +          +
Sbjct: 456 DTWFSSQLWPFATLGWTGKGSQTEELERAYPTQVLATARDIMGLWVARMVMAGEYCMKEI 515

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   G+ +SKS GN +DP++++++ G D +R+ L+ ++   +D  +++D
Sbjct: 516 PFQDVIIYPTVMGSDGKPMSKSRGNGVDPLKLMQDYGADGMRFGLLMQVTGAQDLRFNED 575

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRE 403
            L+   N   AN I N    +   +L + +G  P  P A    D  ILS  + +++ + +
Sbjct: 576 KLENSRN--FANKIRN----AARFVLMNMEGYTPGAPEAKLPVDRWILSRLAGLVERVDK 629

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
                       ++ +       D Y +  K   L   +           + ++     L
Sbjct: 630 AFDAYEFAEVTRELYAFFWNEFCDWYIEFSKS-RLAGDDAAGRLACQRNLIFLLDTSLRL 688

Query: 462 LQAFVPKLANKIFDILFVADE 482
           L   +P +  +I+  L    +
Sbjct: 689 LHPIMPFVTEEIYQQLPGEKD 709



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 54/183 (29%), Gaps = 19/183 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I+          H+GHA +  I D   R  R+ G    +  GTD  G           
Sbjct: 42  YTITIPPPNITGVLHMGHALDDTIQDACIRRARMQGYQARWVLGTDHAGIATQTKVDKKL 101

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                                +  +      +    +  S D  D   T +  +    R 
Sbjct: 102 AEEGISRFDIGREKFIEACYEWRAEYGATIVNQIKGMGCSCDYSDEHFTLDPDYIQAVRH 161

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPVQWMEEEGYFF 167
           L+      G IY+G     +         DDEV     DG  +  ++  V+ ++ + Y  
Sbjct: 162 LFVDWYHDGLIYRGKRIVNWCPHCTTAIADDEVEYVEEDGHLWYLRYPLVEPVDGQDYIV 221

Query: 168 RLS 170
             +
Sbjct: 222 VAT 224


>gi|86607800|ref|YP_476562.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556342|gb|ABD01299.1| valyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 912

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 80/413 (19%), Positives = 144/413 (34%), Gaps = 60/413 (14%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
               E    +          + +    P++ +    +F  +S    + L           
Sbjct: 331 QWFAEHGLLEKVEDYTHTVPHSDRGGVPIEPLLSIQWFCDVSGMGARCLEEEYQRNSPRF 390

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------------- 221
             ER  +V +     L+   +SR+   WG +IP                           
Sbjct: 391 IPERWTKVYTGWLEKLRPWCISRQ-LWWGHQIPAWYPVLNGQLLEDPQAFVVARNGEEAL 449

Query: 222 ---------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                           DP  ++  W  +     +T G+ +  +    +++P  L   G D
Sbjct: 450 LKAREKFGPEVERVEQDPD-VLDTWFSSALWPFSTLGWPEETE-DFKRYYPNSLMSTGFD 507

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    +       +  +P      +       G K+SK+ GN IDP+E++++ G DA
Sbjct: 508 IIFFWVARMAMMGSQFTGQIPFKDVYINGLVRDEHGAKMSKTKGNGIDPLELLDKYGTDA 567

Query: 325 LRYFLVREI-ACGKDGFYDKDG-----LKKRVNADLANGIGNLVSRSVSMILKDYDGMI- 377
           LRY LV+E+   G+D     D             + AN I N  SR V M L+       
Sbjct: 568 LRYALVKEVVGAGQDIRLAYDRKTGESASVEAARNFANKIWN-ASRFVLMNLEGQTPAQL 626

Query: 378 --PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
             P P A   +D  ILS       ++   ++   +      + SL+ +   D Y +  KP
Sbjct: 627 GSPAPEALELADRWILSRLHSTATQVIAELEAYGLGEGARLLYSLIWDDFCDWYIELVKP 686

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             L+  +         V   V+  +  LL  ++P +  +I+ +L  A++    
Sbjct: 687 -RLRGEDLASKRAAQKVLATVLETILKLLHPWMPHITEEIWQLLTQANQTTSI 738



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 22/166 (13%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT-- 69
                    H+GHA+   + DV+ R+ R+ G +VL+  GTD     +    +N       
Sbjct: 49  PPPNVTGNLHMGHAFAFTLPDVVTRYKRMRGYNVLWLPGTDHASIAVHTILENQLRQEGK 108

Query: 70  --------------KVFVDQNSRNFRDMADVLDIS----YDDFIRTTEKRHHDTCRILWK 111
                           + +Q+    +     L +S     D F  T ++         + 
Sbjct: 109 TRFDLGREAFLERAWAWKEQSQGAIKSQLRRLGLSLDWTRDRF--TLDEGLSRAVTEAFV 166

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ + G IY+G Y   +    ++  +D E+       +      P+
Sbjct: 167 RLYEAGLIYRGEYLVNWCPATQSAVSDIELDDKEVKGHLWHFRYPL 212


>gi|154253446|ref|YP_001414270.1| valyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157396|gb|ABS64613.1| valyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 909

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 18/323 (5%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E+ YF  +   Q   +S        I      +  +    S  +  + + K +   +++ 
Sbjct: 412 EKTYFEWMRNIQPWCISRQLWWGHRIPAWYGPDGHVFVAYSDEEAAAEAEKHYGKSVELT 471

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            D   ++  W  +     +T G+ D      A+++  D+ V G DI+ F    W A ++ 
Sbjct: 472 RDED-VLDTWFSSGLWPFSTLGWPDKTP-ELARYYKTDVLVTGFDIIFF----WVARMMM 525

Query: 282 ANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L   ++V  H   +       KG+K+SK+ GNVIDP+++I+E G DALR+ L    A 
Sbjct: 526 MGLHFMQEVPFHTVYIHALVRDEKGQKMSKTKGNVIDPLKLIDEYGADALRFTLAAMAAQ 585

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D       ++     +    + N             +G  P   + T  ++ I+   +
Sbjct: 586 GRDIKLATSRVEG--YRNFGTKLWNAARFCEMNECARVEGFDPAKLSQT-VNKWIVGEVA 642

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R   EI E ++    + A       V     D Y +  KP  L   N +  +        
Sbjct: 643 RTAAEITEAIEAYRFNDAANAAYKFVWNVFCDWYLEFIKP-LLMGDNEEAKAETRATAAW 701

Query: 454 VIRQLAILLQAFVPKLANKIFDI 476
           V+ Q+ ++L  F+P +  +++  
Sbjct: 702 VLDQILLMLHPFMPFVTEELWQR 724



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 53/174 (30%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           +   I           H+GHA    + DVL RF R+ G DVL+  G D  G         
Sbjct: 38  KPYCIVIPPPNVTGSLHMGHALNNTLQDVLIRFERMRGKDVLWQPGLDHAGIATQMIVER 97

Query: 61  ----------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                           A        K           R +    D S + F  T ++   
Sbjct: 98  QLEGEGNIRRRDMGRDAFIERIWKWKGESGGTIIGQLRRLGASCDWSRERF--TLDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                ++ ++  +G IY+      +    +   +D EV       ++     P+
Sbjct: 156 KAVLKVFVELYREGLIYRDKRLVNWHPELQTAVSDLEVENIEVKGHFWHFRYPL 209


>gi|293401447|ref|ZP_06645590.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305085|gb|EFE46331.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 874

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 144/365 (39%), Gaps = 33/365 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F ++     ++L   E   +      +R  +        ++D  +SR+   
Sbjct: 352 VEPYLSKQWFVKMKPLAQEVLKNQEIAEQRINFYPKRFEKTFHQWLENIEDWCISRQ-LW 410

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ +N D   
Sbjct: 411 WGHRIPAWYHKETNEIYVGMEDPQDQENWKQDEDVLDTWFSSALWPFSTLGWPENTD-DL 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           A+++P DL V G DI+ F    + +       N P    +        +G K+SKSLGN 
Sbjct: 470 ARYFPNDLLVTGYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVRDPQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI+  GVDALR+FL      G+D  Y  + ++   N    N I N    ++  + 
Sbjct: 530 IDPMDVIDHFGVDALRFFLTTNSTPGQDLRYSDEKVEASWN--FINKIWNASRFALMQLG 587

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             +          +  D+ IL   + VL  + ENM+         ++ + V +     Y 
Sbjct: 588 DAFHLEDIDVSNASMIDKWILKRFNEVLGNVTENMEKYEFALVGNELYNFVWDDFCSWYI 647

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L+  +    +      V V+R +  +L  F+P ++ +I+  L     +   +S
Sbjct: 648 ELSKA-GLQSADATVVTAARSTLVIVLRGIVRMLHPFMPFVSEEIYLSLPHEKASINLES 706

Query: 489 LDQRL 493
              ++
Sbjct: 707 WPTKV 711



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D++AR+ RL G D+L+  G D  G      
Sbjct: 33  KTKDPFCIVIPPPNVTGKLHLGHAWDTTLQDIVARYKRLQGYDMLWLPGMDHAGIATQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     + ++ +   R     + +S D      T +    
Sbjct: 93  VDERLKGEGISRYDIGREKFLDRAWDWKEEYASTIRKQWAKMGLSLDYTRERFTLDDGLS 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              R ++  + + G IY+G     W      A  N + ++K  +G  Y  ++  V+  +E
Sbjct: 153 HAVRKVFVDLYNDGLIYQGERIINWDPEAMTALSNIEVIHKEIEGAMYYFKYKVVETGKE 212


>gi|296270438|ref|YP_003653070.1| valyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093225|gb|ADG89177.1| valyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 891

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 120/356 (33%), Gaps = 36/356 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F +++                I P +   +        + D  
Sbjct: 374 HCSRCGTVVEPRLSLQWFVKVAPLAKAAGDAVRDGRTRIHPPD-MAKRYFDWVDDMHDWC 432

Query: 209 LSRKTFDWG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLD 246
           +SR+   WG  I +   P                      ++  W  +     +T G+ D
Sbjct: 433 ISRQ-LWWGHRIPVWYGPDGDMVCVGPDEEPPAGYTQDPDVLDTWFSSALWPFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                 A+F+P  + V G DIL F     + +  + +    P    V         G+K+
Sbjct: 492 ETP-DLARFYPTTVLVTGYDILFFWVARMMMFGLYAMDGRPPFRTVVLHGMVRDQFGKKM 550

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK  GNV+DP++ I   G DA R+ L+R    G D    ++      + +  N I N   
Sbjct: 551 SKFFGNVVDPLDWIARYGADATRFTLLRGAHPGSDVAISEEW--AAGSRNFCNKIWNATR 608

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            ++  +       +P     T +D  ILS    V+  +    +     +    +     +
Sbjct: 609 FAL--LNGAVSTGLPERERLTTADRWILSRLQTVIAAVDAAFEEFEFAKVCDALYHFAWD 666

Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D Y +  K         + A     V   V+  L  LL   +P +  +++  L
Sbjct: 667 EVCDWYVELAK--TQLAAGGEVAENTKRVLGHVLDALLRLLHPLIPFVTEELWRAL 720



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 53/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I           H+GHA +  I D L R  R+ G + L+  G D  G      
Sbjct: 65  SGREPYCIVLPPPNVTGSLHVGHALDHSIQDALVRRARMRGFETLWLPGLDHAGIATQNV 124

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          +    +     R + D +D + + F  T +  
Sbjct: 125 VEREIAKEGLSRHDLGREAFVERVWRWKEESGGKILAQMRKLGDSVDWTRERF--TMDPG 182

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D G IY+      +  R     +D EV    D
Sbjct: 183 LSRAVQTIFKRLFDDGLIYRAERIINWCPRCLTALSDIEVTHTED 227


>gi|240170920|ref|ZP_04749579.1| valyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 886

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 127/384 (33%), Gaps = 54/384 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        ++V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASLEPRWFTWVDD-MHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 419 WGHRIPIWYGPDGEKVCVGPDETPPEGWDQDPDVLDTWFSSALWPFSTLGWPEKTP-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGGDDVITLDGRRGPQVPFTDVFLHGLIRDEF 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP+E ++  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 538 GRKMSKSKGNVIDPLEWMDTFGADALRFTLARGASPGGDLAIGEDAV--RASRNFTTKLF 595

Query: 360 NLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           N    ++     K  +  +P P   T++D  IL     V  E+     +    RA   + 
Sbjct: 596 NATRYALLNGATKPSEAPLPAPAELTDADRWILGRLEEVRAEVDSAFDSYEFSRACEALY 655

Query: 419 SLVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +   D Y +      L KT   +  S    V    +  L  LL   +P +   ++ 
Sbjct: 656 HFAWDEFCDWYVE------LAKTQLAEGLSHTTAVLAAALDTLLRLLHPVIPFITEALWQ 709

Query: 476 ILFVADENRCFQSLDQRLKPGFML 499
            L   +        D     G  L
Sbjct: 710 ALTREE---SLVVADWPRPSGITL 730



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 41  SSKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 101 VEKQLAVDGKTKEDFGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 159 LSRAVRTIFKRLYDAGLIYQAERLVNWSPVLQTAISDLEVNY 200


>gi|320162142|ref|YP_004175367.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995996|dbj|BAJ64767.1| valyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 902

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 90/428 (21%), Positives = 156/428 (36%), Gaps = 49/428 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++     W  ++ +      E Y   +         PV+ M    +F R+    
Sbjct: 320 YAGMDRFECRKKIWADMQAQGLTIKTEPYL-MNVPRSQRGGEPVEPMVSTQWFVRIQPLA 378

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
           +  L         I+P  R  +V       ++D  +SR+   WG +IP            
Sbjct: 379 EAALQAVRDGRIKIVPE-RFTKVYYNWLENIQDWCISRQ-LWWGHRIPVWYCADCSQMTV 436

Query: 222 --DDPQ--------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
              DP                ++  W  +     +T G+ +N    +  F+P  +   G 
Sbjct: 437 SRQDPDRCAHCGSLRIEQDPDVLDTWFSSGLWPFSTLGWPENTPDLR-YFYPTSVLETGY 495

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEE 319
           DIL F    W A ++   L    +V  H   L        G+K+SKS GNV+DP+ V+ E
Sbjct: 496 DILFF----WVARMIMMGLEFTGEVPFHTVYLHGLIRDEHGQKMSKSKGNVVDPLIVMNE 551

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +G DALR+ L+     G D       ++   N + AN + N+    +S  L         
Sbjct: 552 MGTDALRFTLLVGSTPGNDVNLSLKKVEA--NRNFANKLWNIGRFVLS-ALDQAPTQAEK 608

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
           P  +T +D  I +    +++E+    Q+     A  Q+         D Y +  K  +  
Sbjct: 609 PAEWTLADSWIWARLQNLIREVERLFQSYQYGEAGRQIYEFTWGEFADWYLEIAK--QQL 666

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
               DRA    Y    V+     LL  F P +  +++  L  A E +   +     +   
Sbjct: 667 AQGGDRAYWTAYTLTRVLDACLRLLHPFTPFVTEELWGYLKRACEEKPIYTPAGGWEKAL 726

Query: 498 MLHKTFDP 505
           ++ +  +P
Sbjct: 727 IVAQFPEP 734



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 18/137 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   IS        + H+GHA  + + D++ R+HR+ G+  L+  GTD  G       
Sbjct: 43  SKKPFVISIPPPNVTGELHLGHAMFVSMEDLMIRYHRMKGVPTLWVPGTDHAGIATQLQV 102

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +    +                   + ++           L  S  +D    T ++    
Sbjct: 103 EKMLASEGLTRDMLGREGFLKRAWEWKNKYGGIITRQIRRLGASCDWDRERFTLDEGLSR 162

Query: 105 TCRILWKKISDKGDIYK 121
             R  + ++ +KG IY+
Sbjct: 163 AVREAFVRLYEKGLIYR 179


>gi|226355541|ref|YP_002785281.1| valyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317531|gb|ACO45527.1| putative valine--tRNA ligase (Valyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 920

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 151/406 (37%), Gaps = 77/406 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F R+  + D++L   +     + P  R  +V       ++D ++SR+   
Sbjct: 371 PVEPIVSTQWFVRMKPFADQVLEGLDKGEIKLTPE-RYTKVNRDWLENIRDWNISRQ-LW 428

Query: 216 WG--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG  I    D +  +YV                              W  +     +T G
Sbjct: 429 WGHQIPAWYDDEGNIYVPDPEKPDLDCDKDPRYAHLNLRRDQDVFDTWFSSNLWPFSTLG 488

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D       KF+P  + V G DIL F    +    + L+   P    +    ++  KG+
Sbjct: 489 WPDTDAEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTGRAPFSTVMLHGLYLDAKGQ 548

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP+E+ ++ GVDA R+        G+D  +D    ++    + AN + N 
Sbjct: 549 KMSKSKGNGVDPLELFDQYGVDACRFAFTFLSTGGQDIKHDPRRFEQ--GRNFANKLWNA 606

Query: 362 VSRSVSMILKDYDGMIPTP------------------------------GAFTESDESIL 391
              ++  + +    M                                     T +D  I+
Sbjct: 607 TRFALMRLGEAAPNMTDDENLSAYVRRAVVPGNADLLRSQAVLGVLRTRDDLTLADRWII 666

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + V QE    ++   I  A+  + S   +   D Y +A KP      +  R  T+  
Sbjct: 667 SRLNAVTQEATAQLEAFDIGAAIRTLYSFTWDEFCDWYIEAAKP----ALSEGRLGTL-G 721

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
               V+  +  LL  F+P + +++++ L    +   R +   D+ L
Sbjct: 722 TLKAVLEHILKLLHPFMPFVTSELYEALGHRRQLALRIWPQADETL 767



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I           H+GHA +  + D L RF R+ G + LF  GTD  G      
Sbjct: 43  SGREPFTIVIPPPNVTGSLHLGHALDNTLIDTLIRFKRMRGFEALFLPGTDHAGISTQVV 102

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + +++     +    L +S D      T ++   
Sbjct: 103 VERQLKEQGLSRFDLGREAFLEKVWAWKEESGGTILNQLTRLGVSADWTRERFTMDEGLS 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + ++  +G  Y+G     +    +   ++ E+
Sbjct: 163 KAVRHQFVRLYHEGAAYRGERIVNWDPASQTTLSELEI 200


>gi|260890419|ref|ZP_05901682.1| valine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860039|gb|EEX74539.1| valine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 881

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 144/380 (37%), Gaps = 44/380 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    ++ ++      +F ++     + L   ++    I P  R  +V       ++D +
Sbjct: 345 HCYRCNSVIEPRVSTQWFVKMEPLAKRALEVVKNGKIQITPK-RWEKVYYNWLENIRDWT 403

Query: 209 LSRKTFDWGIKIP--------------------------------DDPQYIMYVWIDALT 236
           +SR+   WG +IP                                 +   ++  W  +  
Sbjct: 404 ISRQ-IWWGHRIPAYYSEDGTVFVAKSLEEAKIQAREKFGKDVNLTEETDVLDTWFSSAL 462

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +T G+ +  +  K KF+P +  V G DIL F    +   +  +   +P         
Sbjct: 463 WPFSTLGWPNETEDLK-KFFPTNALVTGADILFFWVARMVMMSLYIKDEIPFNYVYLHGI 521

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               KG K+SKSLGN  DP+++I + G DA+R+  +   + G+D  + +  L+  + +  
Sbjct: 522 IRDEKGRKMSKSLGNSPDPLDLIAKYGADAIRFSFLYNTSQGQDIHFSEKLLE--MGSAF 579

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           AN + N  SR V   L+D+D         F   D+ ILS      + I ENM+   +  A
Sbjct: 580 ANKVWN-ASRFVLSNLEDFDVSTTVDNSEFKLEDKWILSKLQTASKLINENMEKYELDAA 638

Query: 414 LAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
                        D Y +  K     +   D+     +V   V+ +   +L  F+P +  
Sbjct: 639 AKLAYEFFRGDFCDWYVEIAKTRVYGQEGSDKV-VAQWVLRHVLDKGLKMLHPFMPFITE 697

Query: 472 KIFDILFVADENRCFQSLDQ 491
           +I+  L   +E        +
Sbjct: 698 EIWQKLQTGEETIMLSDFPK 717



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I+          H+GH     I D + R+ R+ G D L+  G D  G       
Sbjct: 35  EKPGYSIAIPPPNVTGILHMGHMLNNSIQDTIIRYKRMSGFDTLWIPGMDHAGIATQNKV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                     T  + +++          L +S D      T ++   +
Sbjct: 95  ERMLADEGTSKEEIGYDEFLRRTWEWKEKHGGLITKQLRKLGVSLDWTRERFTMDEGLSE 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             + ++ K+ + G IY+G Y   +   D+    DDEV              PV+  +EE
Sbjct: 155 AVKEVFIKLYNDGLIYRGEYIVNWCPHDKTALADDEVNHEDKNGKIWEIRYPVKDSDEE 213


>gi|300721316|ref|YP_003710587.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
           [Xenorhabdus nematophila ATCC 19061]
 gi|297627804|emb|CBJ88335.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
           [Xenorhabdus nematophila ATCC 19061]
          Length = 670

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 104/538 (19%), Positives = 189/538 (35%), Gaps = 46/538 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +    I +    PN   H+GH     +  DVL R     G  V   TG D++   +  
Sbjct: 118 SGQRNTLIFSTPPTPNGDLHLGHLSGPYLAGDVLKRVLLQSGTSVHHGTGRDDNQTYVVT 177

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK-RHHDTCRILWKKISDKGDI 119
           +A           D  +    +      I +D FI    +  + D      + +  K  I
Sbjct: 178 SAAKEQRQPTESADFYASAINETWQGFGIDFDLFITPDNQGEYADFVHHYIELLYKKDFI 237

Query: 120 YKGCYSGWYSLRDEAYYN------DDEVYKGADGQYYNAQHNPVQWMEEEGY-------- 165
           Y+   + +        +            + +DG    A   P +  + +          
Sbjct: 238 YEKETTAYVDHHGNTLHEAYIHGLCPYCEESSDGNACEACGRPNECTDLKQPQVKADGNQ 297

Query: 166 ---------FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                    +FRLSA+  +L  Y ++      P          +   L D+ +S  +  W
Sbjct: 298 PLSRKEFRLYFRLSAFAHQLAQYVQTANM---PAHVHQLCHDMLSQQLPDICISHASH-W 353

Query: 217 GIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL--------HVIGKD 266
           GIK  +P+  Q ++YVW +    YL          G+      AD+        H  G D
Sbjct: 354 GIKHRLPNYEQQVVYVWFEMAMGYLWAASEYPTSRGNNRMEKAADVYSGDTNIVHCYGFD 413

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              +H + +PA   +  L  P+    +  +  +G K S S  ++I   + ++  G D  R
Sbjct: 414 NAYYHTLLFPAIYFALGLTPPQTHIVNELLDLEGSKFSTSRRHLIWGKDFLKLAGADYAR 473

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
             L+     G    +  + +   +NA     + + +S S+   +  Y G IP  GA+   
Sbjct: 474 MALILMRPEGIRENFSVERVAATMNALFPQRLSHWLS-SLQECVMRYGGKIPESGAWLAD 532

Query: 387 DESILSVCSRVLQEIRENM---QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-- 441
            ++       V+    ++    +N    R    V  L+    R+  +Q+    + +N   
Sbjct: 533 QKNHYYELLHVMTSY-QHFSQTENFSPRRMAEHVTKLIDMAYRFNASQRHLFPRNSNALS 591

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + A T L + V   R L   L+  +P L+  I  +L +      +Q     L    M+
Sbjct: 592 NYARTALALDVLAARMLVYALKPLMPALSADIAALLRINATEETWQQATTFLASQHMI 649


>gi|166368993|ref|YP_001661266.1| valyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166091366|dbj|BAG06074.1| valyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 906

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 139/407 (34%), Gaps = 59/407 (14%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE  +            Y +    PV+ +    +F ++     K L+  +         E
Sbjct: 328 DEDGFLVKIEAYRHSVPYSDRGKVPVEPLLSTQWFVKIEPLATKALTCLDQENSPRFVPE 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG---------------------------------- 217
           R  +V       LKD  +SR+   WG                                  
Sbjct: 388 RWTKVYRDWLVKLKDWCISRQ-LWWGHQIPAWYIISETNNEITNHTPFVVAQDETSALAK 446

Query: 218 --------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                   I I  DP  ++  W  +     +T G+ +        ++P    V G DI+ 
Sbjct: 447 AKQEYGEDIIIQQDPD-VLDTWFSSGLWPFSTMGWPEKTLDLDT-YYPTTTLVTGFDIIF 504

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +   A   +  +P              G+K+SKS  N IDP+ +I++ G DALRY
Sbjct: 505 FWVARMTMMAGYFTGQMPFKDVYIHGLVRDENGKKMSKSANNGIDPLILIDKYGTDALRY 564

Query: 328 FLVREIA------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIP 378
            L+RE+A        +      +        + AN I N  SR V M L+     +   P
Sbjct: 565 TLIREVAGAGQDISLQYNRKTDESESVEAARNFANKIWN-ASRFVMMNLEGKTPEELGEP 623

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                  +D  ILS   + +Q+ R+ ++N  +  A   +   +     D Y +  K    
Sbjct: 624 VLENLELADRWILSRYHQTVQKTRDYLENYGMGEAAKGLYEFIWRDFCDWYIELVKTRLW 683

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           K       +T       ++     LL  F+P +  +I+  L   ++ 
Sbjct: 684 KDKESVSCATARQTLAFILAGTLKLLHPFMPHITEEIWHHLTQENQQ 730



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I           H+GHA+E  + D L R+ R+ G + L+  GTD     +   
Sbjct: 34  KGGETYCIVIPPPNVTGSLHMGHAFESSLIDTLVRYKRMTGKNTLWLPGTDHASIAVQAI 93

Query: 62  AQNAGVTTK------------VFVDQNSRN----FRDMADVLDISYD--DFIRTTEKRHH 103
                   K                Q          +    L +S D      T ++   
Sbjct: 94  LDRQLKAEKTDRYQLGREKFLERAWQWKEESGSTIVNQLRRLGVSVDWTRERFTMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + K+ + G IY+G Y   +     +  +D EV
Sbjct: 154 HAVRTAFIKLYEDGLIYRGQYLVNWCPESRSAVSDLEV 191


>gi|297194378|ref|ZP_06911776.1| valyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720964|gb|EDY64872.1| valyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 873

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 131/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 353 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPQE-MEKRYFDWVDNLHDWC 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPNGEIVCVGPDEEPPGGDGWTQETDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  D S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 471 PEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 530 KMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  ++ + E+    ++    +    +    
Sbjct: 587 ATRFALMNGATVEGPLPAAEEMSSTDRWILSRLNKTVAEVDAYYEDYQFAKLSETLFHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K        P R S    V  EV+  +  LL   VP +   ++  L  
Sbjct: 647 WDEVFDWYVELSKTTFFAGGEPARVSA--RVLGEVLDVMLRLLHPVVPFVTETLWTALTG 704

Query: 480 AD 481
            +
Sbjct: 705 KE 706



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPFTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 103

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 104 VERELGKEGKSRHDLGREAFIERVWQWKGESGGQISGQMRRLGDGVAWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 162 LSQAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 206


>gi|297160520|gb|ADI10232.1| valyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 877

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 133/375 (35%), Gaps = 38/375 (10%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D     +   Y  + G   +     ++      ++ ++                 I P +
Sbjct: 341 DGRIVAEKRPYVHSVGH-CSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPED 399

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY----------------------I 227
              +        L D  +SR+   WG  I +   P                        +
Sbjct: 400 -MAKRYFDWVDNLHDWCISRQ-LWWGHRIPVWYGPGGEVVCVGPDEQPPSGEGWHQDSDV 457

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANL 284
           +  W  +     +T G+ ++    + KF+P  + V G DIL F     + +  + +    
Sbjct: 458 LDTWFSSGLWPFSTLGWPEDTGSLR-KFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTP 516

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P              G+K+SKS GN ++P++ +++ G DA+R+ L R    G D    +D
Sbjct: 517 PFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDQYGSDAVRFTLARGANPGVDVPIGED 576

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++   N   AN I N  +R   M     +G +P     + +D  ILS  + V+ E+   
Sbjct: 577 WVQASRN--FANKIWN-ATRFALMNGATVEGELPAAERLSAADRWILSRLNTVVAEVDAY 633

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            ++    +    +     +   D Y +  K         + A     V  EV+  +  LL
Sbjct: 634 YEDYQFAKLSDVLYHFAWDEVFDWYVELSK--TTFAQGGEAADASRRVLGEVLDVMLRLL 691

Query: 463 QAFVPKLANKIFDIL 477
              VP +  K++  L
Sbjct: 692 HPVVPFVTEKLWTAL 706



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA+E  I D L R  R+ G + L+  G D  G      
Sbjct: 48  SGKEPYTIVIPPPNVTGSLHLGHAFEHTIIDALTRRKRMQGYETLWQPGMDHAGIATQNV 107

Query: 62  AQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            +               + FV++  +             R + D +  + + F  T ++ 
Sbjct: 108 VERELAKEGVSRHDLGREAFVERVWQWKATSGGQISGQMRRLGDGVAWNRERF--TMDEG 165

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 166 LSKAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 210


>gi|294101891|ref|YP_003553749.1| valyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616871|gb|ADE57025.1| valyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 888

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 137/368 (37%), Gaps = 38/368 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    H  V+    E +F +     D  +   E      +P + +     +++  ++D  
Sbjct: 348 HCYRCHTVVEPYLSEQWFVKAKPLADAGIEAVEKGDITWIPEQWQKIYYQWME-NIRDWC 406

Query: 209 LSRKTFDWGIKIP--------------DDPQY--------------IMYVWIDALTNYLT 240
           +SR+   WG +IP              +DP +              ++  W  +     +
Sbjct: 407 ISRQ-LWWGHRIPAWTCAECGHITVSEEDPTHCEKCGSARIQQDEDVLDTWFSSALWPFS 465

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +  +     F+P  L V   DI+ F    +         N P  +          
Sbjct: 466 TLGWPEKTE-ELNYFYPTSLLVTAFDIIFFWVARMIMMGLEFMENEPFKEVYIHALIRDE 524

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G+K+SKS GNVIDP+ +I++ G DALR  L      G+D     + ++        N +
Sbjct: 525 EGQKMSKSKGNVIDPLTMIDKYGADALRLTLAALTVQGRDILLSTNKIE--TYRLFMNKL 582

Query: 359 GNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N    ++  + ++  +  +P  G     D+ IL+   +V ++I   +    I  A   +
Sbjct: 583 WNASRFALINLEENCSEKPLPDKGELRLHDQWILTRTQQVTEQITRLLDGYFIGEAARML 642

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP         R      +   V + +  L+  F+P    +++ 
Sbjct: 643 YDFIWGDLCDWYLEMSKPALKGDEGESRVKNTQAIVEYVFKTVLKLIHPFIPFATEELWH 702

Query: 476 ILFVADEN 483
               +D++
Sbjct: 703 TFGFSDDS 710



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 22/168 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA+     D++ R+ R++G +VL+  GTD  G      
Sbjct: 37  TTKEAFSIVIPPPNVTGSLHMGHAFNNTFQDIVCRYKRMNGFNVLWLPGTDHAGIATQNV 96

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + +  +     + + +  D   + F  T ++ 
Sbjct: 97  VERELAKDGISRHDLGREEFVNKVWEWKEEYGSRIIEQMKKLGNSCDWERERF--TLDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
                R ++ ++  KG IYKG Y   +  R     +D EV        
Sbjct: 155 LSQAVRTVFVRLYKKGLIYKGRYIINWCPRCHTALSDIEVEHEDLKGC 202


>gi|319949127|ref|ZP_08023219.1| valyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437199|gb|EFV92227.1| valyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 878

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 125/381 (32%), Gaps = 49/381 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+                 I P  +      +V   + D  +SR+   
Sbjct: 342 PIEPRLSLQWWVRVEELAKMAGDAVRDGDTVIHPTSQEPRWFDWVDD-MHDWCISRQ-LW 399

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 400 WGHRIPIWYGPDGEVVCVGPDEEPPAGYTQEADVLDTWFSSALWPFSTMGWPERTA-DLE 458

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLL------------SANLPLPKKVFSHGFILHKGE 301
           +F+P  + V G DIL F       F                 +P              G+
Sbjct: 459 RFYPTSVLVTGYDILFFWVARMMMFGTFVGRRLGGDKAAPGTVPFTDVFLHGLVRDEHGQ 518

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP++ ++  G DALR+ L R    G D     D  +   N   A  + N 
Sbjct: 519 KMSKSKGNGIDPLDWVDRFGADALRFTLARGAHPGGDLSVGDDSAQASRN--FATKLFN- 575

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M       + P     T++D  IL    +V + + E ++     +A   +    
Sbjct: 576 ATRFALMNGAKVGPV-PDAADLTDADRWILHRLGQVRETVDEALERYEFSKACEALYHFA 634

Query: 422 SE--VDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +   D Y +  K  +    +     +RA     V   V+  L  +L   +P +   ++ 
Sbjct: 635 WDEVCDWYLELAKV-QFGNDDESRASERAERTRLVLGHVLDVLLRMLHPVIPFVTETLWT 693

Query: 476 ILFVADENRCFQSLDQRLKPG 496
            L    E+         + P 
Sbjct: 694 AL-TGGESLVIAPWPTDVVPA 713



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    +           H+GHA +  + DVL R  R+ G +VL+  G D  G      
Sbjct: 21  SGKPAYSVVLPPPNVTGSLHMGHALDHTLMDVLTRRRRMQGYEVLWLPGMDHAGIATQTL 80

Query: 62  AQNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
                                 KV+  +           R + D +D S + F  T +  
Sbjct: 81  VDRKLRDEGIDRHEIGREAFIEKVWEWKRESGGTIGEQMRRLGDGVDWSRERF--TLDDG 138

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D+G IY+      +S   +   +D EV  
Sbjct: 139 LSRAVQTIFKELYDQGLIYRAERLVNWSPTLQTAISDIEVKY 180


>gi|312140349|ref|YP_004007685.1| valine-tRNA ligase vals [Rhodococcus equi 103S]
 gi|325677074|ref|ZP_08156743.1| valine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311889688|emb|CBH49005.1| valine-tRNA ligase ValS [Rhodococcus equi 103S]
 gi|325552059|gb|EGD21752.1| valine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 886

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 124/358 (34%), Gaps = 42/358 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++ A               I P  +     ++V   + D  +SR+   W
Sbjct: 365 IEPRLSMQWWVKVDALAKAAGDAVRGGDTVIHPASQEPRWFAWVD-NMHDWCISRQ-LWW 422

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +       K
Sbjct: 423 GHRIPIWYGPNGEVQCFGPDETAPEGWEQDPDVLDTWFSSGLWPFSTMGWPEKTA-EIEK 481

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS---------ANLPLPKKVFSHGFILHKGEKISK 305
           F+P  + V G DIL F       F              +P              G+K+SK
Sbjct: 482 FYPTSVLVTGYDILFFWVARMMMFGTYVAGDDAVQGGKVPFKDLFLHGLVRDQFGKKMSK 541

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN IDP++ ++  G DALR+ L R    G D    +D  +   N   AN + N    +
Sbjct: 542 SRGNGIDPLDWVDRFGADALRFTLARGANPGSDLAVGEDHAQSSRN--FANKLFNATKFA 599

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           +       D   P   A T++D  IL    +V  E+ E  +     +A   +     +  
Sbjct: 600 LMNGAVVADL--PARDALTDADRWILDRLEQVRGEVDEAFEKFEFSKACEALYHFAWDEV 657

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            D Y +  KP +L       A     V   V+  L  +L   +P +   ++ +L   +
Sbjct: 658 CDWYLELAKP-QLA-EGSVYADGTKAVLGNVLDTLLRMLHPVIPFVTETLWKVLTGGE 713



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 44  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALCRRKRMQGFEVLWLPGMDHAGIATQTI 103

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 104 VEKQLAADGKKKEDFGREAFIEKVWDWKRESGGTIQGQMRRIGDGVDWSRDRF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D G IY+      +S   +   +D EV  
Sbjct: 162 LSRAVQTIFKRLYDDGLIYRAERLVNWSPVLQTAISDIEVKF 203


>gi|183219675|ref|YP_001837671.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909811|ref|YP_001961366.1| valyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774487|gb|ABZ92788.1| Valine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167778097|gb|ABZ96395.1| Valyl-tRNA synthetase (Valine--tRNA ligase; ValRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 896

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 131/355 (36%), Gaps = 43/355 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +    +F ++ +     +   +S      P         +++  ++D  +SR+   W
Sbjct: 362 IEPLLSTQWFVKIESLAKPAIEVVKSGKVQFQPKMWEKTYFEWME-NIRDWCISRQ-LWW 419

Query: 217 GIKIP----------------------------------DDPQYIMYVWIDALTNYLTTT 242
           G +IP                                     + ++  W  +     +  
Sbjct: 420 GHRIPAYYAPNGDMVVAESLEEAISLFEKKGISVTKDTIKQDEDVLDTWFSSGLWPFSVF 479

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+ +  +  K +++P  + V G DI+ F    +         ++P  K +         G
Sbjct: 480 GWPEKTEELK-QYYPTSVLVTGFDIIFFWVARMIMNGLKFMGDVPFQKVLIHGLVRDKDG 538

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K SKSLGNV+DP++++ + G D+ R+FL   +  GKD  +D+  L         N I N
Sbjct: 539 KKFSKSLGNVVDPLDMMSKYGTDSFRFFLAAVLPEGKDILFDESRLDG--YRSFCNKIWN 596

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
                   + +D+  + P   +  ++D  IL    ++L    +     L       +   
Sbjct: 597 SSRFIFMNLPEDFSPIEPNLDSLEDTDLWILHEFDQMLGRYEKAYSGYLFFEMANAIYDF 656

Query: 421 VS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           V     D Y +  K        P+ A     V V V+++   LL  F+P +  +I
Sbjct: 657 VWGSFCDWYLELTKARVYGNVTPESAEKARQVLVSVLKKSLGLLHPFMPFITEEI 711



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           HIGHA    I D++ R  R  G +V++  G D  G      
Sbjct: 33  SRKETFSIVIPPPNVTGNLHIGHALNHTIQDIIIRIERKKGKNVVWVPGMDHAGIATQVV 92

Query: 62  AQNA---------GVTTKVFVDQNSRNFRD-----------MADVLDISYDDFIRTTEKR 101
            +             T + F+++     +            + + +D S + F  T ++ 
Sbjct: 93  VERELAKEGKSRTDFTREEFIEKVWEWKKHSGGMISKQQRLLGESVDWSKERF--TFDEG 150

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  +++ + D+G IY+G     +    +   +D EV  
Sbjct: 151 LSKAVIKVFRTLFDEGLIYRGERIINWCPVTKTAISDIEVEY 192


>gi|239979443|ref|ZP_04701967.1| valyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291451313|ref|ZP_06590703.1| valyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291354262|gb|EFE81164.1| valyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 873

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 74/358 (20%), Positives = 129/358 (36%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E   +        L+D  
Sbjct: 353 HCSRCKTTVEPRLSMQWWVKVGPLAQAAGDAVRDGQVKIHPQE-MEKRYFDWVDDLRDWC 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I I   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPIWYGPDGEIVCVGPDEEPPGGEGWHQETDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  D S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 471 PEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ ++  G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 530 KMSKSFGNAVNPLDWMDAYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  + V+ E+    ++    +    +    
Sbjct: 587 ATRFALMNGATVEGELPAAEELSATDRWILSRLNTVVAEVDAYYEDYQFAKVSDALFHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K   +    P   S    V  EV+     LL   +P +   ++  L
Sbjct: 647 WDEVFDWYVELSKTTFMGGGRPAEVSA--RVLGEVLDTTLRLLHPVMPFVTETLWTTL 702



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E  +  I  +        H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SENPRYAIVISPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 103

Query: 62  AQ--------------NAGVTTKVFVDQNSR------NFRDMADVLDISYDDFIRTTEKR 101
            +                    +V+  +N          R + D +  S + F  T ++ 
Sbjct: 104 VERELAKEGKSRHDLGREAFIERVWKWKNESGGQISGQMRRLGDGVAWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ +   IY+      +  R     +D EV    D
Sbjct: 162 LSRAVQTVFKKMYEDELIYRAERIINWCPRCLTAISDIEVEYSDD 206


>gi|270013433|gb|EFA09881.1| hypothetical protein TcasGA2_TC012029 [Tribolium castaneum]
          Length = 287

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 95/275 (34%), Positives = 144/275 (52%), Gaps = 11/275 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +   K +++T I Y NA PHIGH Y  +IAD L R+ ++ G     F+TGTDEHG KI +
Sbjct: 15  QSNSKFFVTTPIYYVNASPHIGHLYSSVIADALYRWQQVLGAGKFKFSTGTDEHGSKIQQ 74

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA         +  + S +++ +++V  ISY DF+RT+++ H       W  + +KG I+
Sbjct: 75  AAHKNNTNPSDYCTRVSSDYKRLSEVFSISYTDFVRTSDEEHKKCVHKFWNVLKNKGKIF 134

Query: 121 KGCYSGWYSLRDEAYYNDDEV-----YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
              Y+GWY + DE++  + ++       G          +PV+W+EE  Y F L + QD 
Sbjct: 135 SSKYAGWYCISDESFLTESQLKEKVGPDGRKTIISGESGHPVEWIEEVNYMFPLGSLQDD 194

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMYVWID 233
           +  +  S         ++  +    K  L D+S+SR      WGI++PDD    +YVW+D
Sbjct: 195 VKYWLRSENAVRPAKFQKILLDMVSKGPLPDISISRPASRVHWGIQVPDDETQTVYVWLD 254

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           AL NYLT  GY         + WP  + VIGKDIL
Sbjct: 255 ALVNYLTAAGYSHASLH---QIWPPSVQVIGKDIL 286


>gi|119510813|ref|ZP_01629939.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119464576|gb|EAW45487.1| valyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 1010

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 139/374 (37%), Gaps = 55/374 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    DK L + ++        +R  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIRPMADKALKFLDNQNTPEFVPQRWTKVYRDWLVKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +K+  DP  ++  W  
Sbjct: 414 WGHQIPAWYAVSETDGQITDTTPFVVAKSADEAWEKAKSQFGADVKLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +        ++P    V G DI+ F    +       +  +P      
Sbjct: 473 SGLWPFSTLGWPEQTP-DLETYYPNSTLVTGFDIIFFWVARMTMMGGHFTGKMPFNDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLK-KR 349
               +   G+K+SK+ GN IDP+ +I++ G DALRY L++E+A  G++   + D  K + 
Sbjct: 532 HGLVLDENGQKMSKTKGNGIDPLLLIDKYGTDALRYTLIKEVAGAGQNIRLEYDRKKDES 591

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENM 405
            + + +    N +  +   ++ + DG  P     P     SD  ILS   +V+ +    +
Sbjct: 592 ASVEASRNFANKLWNAARFVMMNLDGQTPAQLGEPIPTELSDTWILSRYHQVINQTSNYI 651

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            N  +  A   +   +     D Y +  K    K  +P        +   V+  +  LL 
Sbjct: 652 DNYGLGEAAKGLYEFIWGDFCDWYIELVKSRLQKDADPASRKVAQQILGYVLEGILKLLH 711

Query: 464 AFVPKLANKIFDIL 477
             +P +  +I+  L
Sbjct: 712 PLMPHITEEIWQTL 725



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 19/169 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAK 60
           E   I           H+GHA+E  + D L R+HR+ G + L+  GTD         + K
Sbjct: 40  EPYCIVIPPPNVTGSLHMGHAFESALIDTLIRYHRMKGRNTLWVPGTDHASIAVHTMLEK 99

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADV--------------LDISYDDFIRTTEKRHHDTC 106
             +  G T      +                         + + +     T +       
Sbjct: 100 QLKKEGKTRYELGREQFLERAWQWKADSEGTIVNQLKRLGVSVDWTRERFTLDAGLSQAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQH 154
              +  + + G IY+G Y   +    ++  +D EV  +  DG  ++ ++
Sbjct: 160 LEAFVSLYESGLIYRGEYLVNWCPASQSAVSDVEVDNQEVDGNLWHFRY 208


>gi|317051233|ref|YP_004112349.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946317|gb|ADU65793.1| valyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 884

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/387 (20%), Positives = 147/387 (37%), Gaps = 14/387 (3%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K +   G   +        L D+ Y N + + + A       +   V    E+ YF  + 
Sbjct: 338 KHLHSVGKAERSGAIVEPYLSDQWYVNVEVMAQKASDAVRTKEVRFVPENWEKTYFHWMD 397

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +D  +S         +P     E      +   ++    K     I+  DD   ++  
Sbjct: 398 NIRDWCISRQLWWGHR-IPAWYCEECGHITVTVEMEVQRCEKCSSAHIRQDDD---VLDT 453

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW-PAFLLSANLPLPKK 289
           W  +      T G+  +    + KF+P  + V   DI+ F       A     +    ++
Sbjct: 454 WFSSQLWPFATMGWPGSTATLE-KFYPTSVLVTAFDIIFFWVARMIMAGYTFTDQKPFQE 512

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           V+ H  +  K G K+SKS+GNVIDP+ +I++ G DALR+ L+ +   G+D   D D ++ 
Sbjct: 513 VYIHALVRDKYGRKMSKSVGNVIDPLGIIDQYGADALRFTLISQAGQGRDIKLDIDRIEG 572

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                  N + N +  ++  + +        P     SD  IL   +  + E+R  +   
Sbjct: 573 --YTTFVNKMWNALRFTLHTMPEH--PSSQLPENLAISDAWILGRLNATIAEVRRGLDGY 628

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             + A A +   + +   D Y +  K    K ++ ++A     V    +     LL  F+
Sbjct: 629 QFNEASAAIYRFIWQELCDWYIELAKHRLYKGSDEEKAGA-SAVLCHCLLTSMKLLHPFM 687

Query: 467 PKLANKIFDILFVADENRCFQSLDQRL 493
           P +  +I+  L    E+         L
Sbjct: 688 PFVTEEIYQQLPGHGESVVIDHFPVEL 714



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           HIGHA  M + DVL R+ R+DG + L+  GTD         
Sbjct: 33  SQKPAYSIVIPPPNVTGYLHIGHALCMTLQDVLIRYKRMDGYEALWLPGTDHASIATQIV 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + + +     +    L  S D      T +++ +
Sbjct: 93  VEKQLAEKGIDRVQLGREAFLEKVWEWKEHSGSMIVEQLKRLGCSCDWERERFTMDEQCN 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 + ++  +G IY+G     +    +   +D EV              PV+  +E
Sbjct: 153 RGVMEAFVRLYHEGIIYRGKRLVNWCPVQQTSLSDLEVIHEDVEGAMYYIRYPVEGSDE 211


>gi|213618743|ref|ZP_03372569.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 239

 Score =  179 bits (455), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 10/233 (4%)

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           GKDI+ FH+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D
Sbjct: 1   GKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDAD 60

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           +LRY+   +++    D   + +   +RVNAD+ N + NL SR+   I K +DG++    A
Sbjct: 61  SLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVL----A 116

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-- 440
              +D  +    +     I E  +++   +A+ ++++L    +RY D Q PW + K    
Sbjct: 117 AELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGR 176

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                 +  + + + R L   L+  +P L+ ++   L        + +++Q L
Sbjct: 177 DADLQAICSMGINLFRVLMTYLKPVLPTLSERVEAFLN---SELNWDAIEQPL 226


>gi|15805185|ref|NP_293872.1| valyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|12585355|sp|Q9RY06|SYV_DEIRA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|6457813|gb|AAF09735.1|AE001877_2 valyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 913

 Score =  179 bits (455), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 82/387 (21%), Positives = 145/387 (37%), Gaps = 73/387 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +  E +F ++  + D++L   +     ++P  R  +V       ++D ++SR+   
Sbjct: 366 PVEPIISEQWFVKMKPFADQVLEGLDKGEIKLVPE-RYTKVNRDWLENIRDWNISRQ-LW 423

Query: 216 WG--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG  I    D +  +YV                              W  +     +T G
Sbjct: 424 WGHQIPAWYDKEGNIYVPDPENPELDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 483

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D       KF+P  + V G DIL F    +    + L+   P    +    ++  KG+
Sbjct: 484 WPDTDSEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTGQAPFSTVMLHGLYLDAKGQ 543

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP+E+  + GVDA R+        G+D  +D    ++    + AN + N 
Sbjct: 544 KMSKSKGNGIDPLELFGQYGVDACRFAFTFLSTGGQDIKHDARRFEQ--GRNFANKLWNA 601

Query: 362 VSRSVSMI----------------------------LKDYDGMIPTPGAFTESDESILSV 393
              ++  +                             KD    +      T +D  I+S 
Sbjct: 602 TRFALMRLGEARIEGSDDLSAYVRAAVTLPDGVLLRSKDVLAQLKERDDLTLADRWIISR 661

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + V  E    +    I  A+  + S   +   D Y +A KP EL   N    +T     
Sbjct: 662 LNDVTAEASAQLDAFDIGAAIRTLYSFTWDEFCDWYIEAAKP-ELASGNLGTMAT----L 716

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +  LL  F+P + ++++  L 
Sbjct: 717 KVVLEHVLKLLHPFMPFITSELYAALG 743



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA +  + D L R+ R+ G + L+  G D  G      
Sbjct: 37  SGKDPFTIVIPPPNVTGNLHLGHALDNTLIDTLIRYKRMAGFEALYLPGMDHAGISTQVV 96

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  ++     D    L +S D      T ++   
Sbjct: 97  VERQLKDAGTSRHDLGREAFLEKVWEWKGKSGGMILDQLTRLGVSADWTRERFTMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + K+   G  Y+G     +    +   ++ E+
Sbjct: 157 RAVRTQFVKLYHDGLAYRGERIVNWDPASQTTLSELEI 194


>gi|49475806|ref|YP_033847.1| valyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647788|sp|Q6G2V3|SYV_BARHE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49238613|emb|CAF27854.1| Valyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 907

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 132/367 (35%), Gaps = 46/367 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++   +      +          +P     +        ++   +SR+   
Sbjct: 377 PIEPFLTDQWYVNAAELAKPAIEAVHQGKTQFIPDSW-QKTYFNWMQNIQPWCVSRQ-LW 434

Query: 216 WG--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTG 243
           WG  I     P                                ++  W  +     +T G
Sbjct: 435 WGHQIPAWYGPDGRVFVEKSEEEALNSALSHYGEVVNLTRDPDVLDTWFSSALWPFSTLG 494

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +      A F+P  L V G DI+ F    +          +P P           KG 
Sbjct: 495 WPNKTP-ELATFYPTSLSVTGFDIIFFWVARMMMMGLHFMGEVPFPTVYVHALVRDQKGA 553

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN+IDP+E+I++   D+LR+ L    A G+D   D   +      + A  + N 
Sbjct: 554 KMSKSKGNIIDPLELIDQYSADSLRFTLAIMAAQGRDVKLDPSRIAG--YRNFATKLWN- 610

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M    +D       A    +  IL+  S+ +  +   ++N   + + + +   +
Sbjct: 611 ATRFAQMNGVKHDPDFKPEKAKLALNRWILTELSKTVVAVTTGIENYKFNESASALYRFI 670

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DI 476
                D Y +  KP   + +N D  + V   T  V+ ++  LL  F+P +  +++   + 
Sbjct: 671 WNTLCDWYLELLKP-IFQGSNEDAKNEVQACTAWVLDEVYKLLHPFMPHMTEELWSLTET 729

Query: 477 LFVADEN 483
           L +  E+
Sbjct: 730 LGMKRED 736



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 21/170 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--- 64
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNTTIQDIVVRFQRMRGKNVLWQPGMDHAGIATQMVVERQLA 98

Query: 65  AGVTT--------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                                +  +      +    L +S D      T +    +  R 
Sbjct: 99  ERQEPTRQEMGREKFVERIWEWRYETGGVIANQLRRLGVSCDWSRERFTMDDGLSEAVRE 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++  +  +G IY+      +  +     +D EV +     +      P++
Sbjct: 159 VFVTLYKQGLIYRDKRLVNWDPKLLTAISDLEVEQKEVKGHLWHFRYPLE 208


>gi|220926267|ref|YP_002501569.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219950874|gb|ACL61266.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 903

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 125/354 (35%), Gaps = 43/354 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  +    ++ +          +P         +++  ++   +SR+   W
Sbjct: 372 IEPYLTDQWYVNVKPLAERAMRAVRDGKTRFVPEAYEKTYFQWLE-NIEPWCISRQ-LWW 429

Query: 217 G--IKIPDD------------------------------PQYIMYVWIDALTNYLTTTGY 244
           G  I    D                               + ++  W  +     +T G+
Sbjct: 430 GHQIPAWYDAEGQVFVAGSEEEALAKAAAHHGRPVALRRDEDVLDTWFSSGLWPFSTLGW 489

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEK 302
            +      A+++P    V G DI+ F         L A   +P + V+ H  +   KG K
Sbjct: 490 PEATP-ELARYYPTSTLVTGFDIIFFWVARMMMLSLHAMDEVPFRTVYIHALVRDEKGAK 548

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+++++  G DALR+ L    A G+D       ++     + A  + N  
Sbjct: 549 MSKSKGNVVDPLDLVDRYGADALRFTLAAMAAQGRDIKLSIQRVEG--YRNFATKLWN-A 605

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M     D            +   L   +R + E+   +     + A       V 
Sbjct: 606 ARFAEMNGCRIDPAFRPEALRETLNAWALGEAARAVAEVTAALDAFRFNDAANAAYRFVW 665

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               D Y +  KP  L+                +I Q+ ILL  F+P L  +++
Sbjct: 666 NVFCDWYLELAKP-VLQGEAGTAQDETRATVAFLIDQICILLHPFMPFLTEELW 718



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 25/169 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA    + DVLARF RL G DVL+  GTD  G       +      
Sbjct: 41  MIPPPNVTGSLHMGHALNNTLQDVLARFERLRGKDVLWQPGTDHAGIATQMVVERRLAEH 100

Query: 70  K----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +           FV +                + +    D S + F  T ++        
Sbjct: 101 QEPDRRTLGRPEFVRRVWEWKAESGGTIVNQLKRLGASCDWSRERF--TMDEGLSRAVIK 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +  +G IY+      +  + +   +D EV +     +      PV
Sbjct: 159 VFVDLHAEGLIYRDKRLVNWDPKFQTAISDLEVQQVEVKGHLWHFAYPV 207


>gi|302545422|ref|ZP_07297764.1| valine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463040|gb|EFL26133.1| valine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 877

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 80/414 (19%), Positives = 144/414 (34%), Gaps = 66/414 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++     +           I P +  ++        L D  
Sbjct: 357 HCSRCKTTIEPRLSMQWWVKVGPLAKEAGDAVRDGRVKIHPED-MSKRYFDWVDNLHDWC 415

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 416 ISRQ-LWWGHRIPVWYGPDGEVVCVGPDEEPPSGEGWTQDSDVLDTWFSSGLWPFSTLGW 474

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  D S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 475 PEQTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 533

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ ++  G DA+R+ L R    G D    +D ++   N   AN I N 
Sbjct: 534 KMSKSFGNAVNPLDWMDAYGSDAVRFTLARGANPGVDVPIGEDWVQASRN--FANKIWN- 590

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P P   + +D  ILS  + V+ ++     +    +    +    
Sbjct: 591 ATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVADVDAFYDDYQFAKLSDTLFHFA 650

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-- 477
            +   D Y +  K     +     A     V  EV+     LL   VP +  K++  L  
Sbjct: 651 WDEVFDWYVELSK--TTFQKGGAEADASRRVLGEVLDVTLRLLHPVVPFVTEKLWTALTG 708

Query: 478 -------------FVADE--NRCFQSL------------DQRLKPGFMLHKTFD 504
                           DE   R  ++L            DQ L+PG  +    +
Sbjct: 709 QESVVIADWPKDSGFRDEAAEREIENLQQVVTEVRRFRADQGLQPGQKVPARLE 762



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 53/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
             ++   +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 48  SGKDPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGFETLWQPGMDHAGIATQNV 107

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  + + F  T +  
Sbjct: 108 VERELAKEGVSRHDLGREAFVERVWQWKGESGGQISGQMRRLGDGVAWNRERF--TMDDG 165

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 166 LSKAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 210


>gi|118472696|ref|YP_888893.1| valyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118173983|gb|ABK74879.1| valyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 872

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 128/364 (35%), Gaps = 47/364 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++ +          +    I P        ++V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVKVESLAKAAGDAVRNGDTVIHPPSLEPRWFAWVD-NMHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D+     A
Sbjct: 419 WGHRIPIWHGPDGETVCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTMGWPDHTP-ELA 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS-------------ANLPLPKKVFSHGFILHK- 299
           KF+P  + V G DIL F       F                      + VF HG I  + 
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDPAVTLEGARGRQVPFENVFLHGLIRDEF 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN IDP++ +E+ G DALR+ L R  + G D    +D    R + + A  + 
Sbjct: 538 GRKMSKSRGNGIDPLDWVEKFGADALRFTLARGASPGGDLSIGEDH--ARASRNFATKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P     T++D  IL     V  E+     N   +RA   +  
Sbjct: 596 NATRFAL--MNGAAPAPLPAASELTDADRWILGRLEEVRAEVDSAFDNYEFNRACEALYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   D Y +  K            +    V   V+  L  LL   +P +   ++  L
Sbjct: 654 FAWDEFCDWYVELAK--VQLGQEEVHTARTTAVLAAVLDTLLKLLHPVMPFVTETLWKTL 711

Query: 478 FVAD 481
              +
Sbjct: 712 TGGE 715



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + DVL R  R+ G +VL+  G D  G      
Sbjct: 41  SDKPPYSIVLPPPNVTGSLHMGHALDHTLMDVLTRRKRMQGYEVLWLPGMDHAGIATQTV 100

Query: 62  AQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            +               + FV +                R + D +D S D F  T ++ 
Sbjct: 101 VEKQLAADGKTKEDLGREEFVAKVWDWKRESGGTIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   E   +D EV  
Sbjct: 159 LSRAVRTIFKRLFDAGLIYQAERLVNWSPVLETAISDLEVKY 200


>gi|300022772|ref|YP_003755383.1| valyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524593|gb|ADJ23062.1| valyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 939

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 127/374 (33%), Gaps = 60/374 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + ++   +      ++  E+     +P         +++  ++   +SR+   W
Sbjct: 389 VEPWLTDQWYVNAAELAKPAMAAVENGKTVFVPKNWEKTYFEWMR-NIQPWCISRQ-LWW 446

Query: 217 G--IKIPDDPQY-----------------------------------------------I 227
           G  I     P                                                 +
Sbjct: 447 GHQIPAWYGPDGKYFVAATEDEAQALAQAYYAKSPTPNPSPQGGGETSGSHVVLKRDEDV 506

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+ D       +++P  + V G DI+ F    +          +P
Sbjct: 507 LDTWFSSALWPFSTLGWPDETP-ELGRYYPTSVLVTGFDIIFFWVARMMMMGLHFMDEVP 565

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                        +G+K+SKS GNV+DP+ +I+E G DALR+ L    A G+D    K  
Sbjct: 566 FKDVYIHALVRDERGQKMSKSKGNVMDPLVLIDEFGADALRFTLAAMAAQGRDIKLAKSR 625

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           ++     + A  + N  SR   M             A    ++ I+       + + E +
Sbjct: 626 VEG--YRNFATKLWN-ASRFAEMNECVRQRNFDPKSATQIFNKWIIGEAELTAKAVTEAL 682

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +    + A A +   V     D Y +  KP  L   + D  S    VT   + Q+  +L 
Sbjct: 683 EGYKFNEAAAAIYEFVWGEFCDWYLELIKP-LLAGDDEDAKSETRAVTAWTLDQILKMLH 741

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +++  +
Sbjct: 742 PFMPFITEELWAHM 755



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 59/176 (33%), Gaps = 23/176 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +   
Sbjct: 39  YSIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGRDVLWQPGTDHAGIATQMVVERQL 98

Query: 67  VTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
              K                +  +           + +    D S + F  T ++     
Sbjct: 99  AAGKQPSRRELGREEFLKRVWAWKEESGGTIINQLKRLGASCDWSRERF--TMDEGLSKA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              ++ ++ ++G IYK      +  + +   +D EV +      ++   +  +  +
Sbjct: 157 VVKVFVQLYNEGLIYKDKRLVNWDPKFQTAISDLEVVQVEARGKFSWSKDGGEPFD 212


>gi|221633490|ref|YP_002522715.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221157072|gb|ACM06199.1| valyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 892

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 80/401 (19%), Positives = 141/401 (35%), Gaps = 49/401 (12%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D   Y    +       +       V+ +  + +F ++       +    +     +P  
Sbjct: 333 DRQGYLVRTMPHRYSLGHCQRCGAVVEPLISKQWFVKMMPLAQPAIEVARNGTLQFIPE- 391

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
           R   V       ++D  +SR+   WG +IP                              
Sbjct: 392 RFRAVYLHWLENVRDWCISRQ-LWWGHRIPVWYCQDCGQLTVTAEETIERCEHCGSTRIE 450

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     +T G+ D+ D  +  F+P  +   G DIL F    + +    
Sbjct: 451 QDPD-VLDTWFSSGLWPFSTLGWPDDTDDLR-YFYPGSVMETGYDILFFWVARMVFLGLE 508

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               +P             +G+++SK+ GNVIDP EV ++ G DALR+ LV     G D 
Sbjct: 509 FMGEVPFYTVYLHGTVRDERGQRMSKTKGNVIDPTEVTQQYGADALRFTLVTMAGPGTDM 568

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-------DYDGMIPTPGAFTESDESILS 392
               + ++   N   AN I N    ++ ++         D   + P   A + +D  ILS
Sbjct: 569 KLSLNRVEASRN--FANKIWNATRYTLRVLAGGEIEQAPDGSVVSPERSAMSLADRWILS 626

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
              RV  E+ + ++    H A   +   +     D Y +A K           A      
Sbjct: 627 RLERVTTEVTDQLERYQFHEAGHLLYDFLWSQFCDWYIEASK--VAINAGDPGARAARQT 684

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              V+ +   LL  F+P +  +++  L  A E+       Q
Sbjct: 685 LAYVLERALRLLHPFMPFVTEELWQRLPHAGESIMVAPWPQ 725



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
            R+   I         + H+GHA  + I D++ R+ R+ G   L+  G D  G      +
Sbjct: 40  NRKPFVIIMPPPNVTGELHMGHALFVAIEDLMIRWRRMQGYPTLWLPGADHAGIAGQWVV 99

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            +     G+T               ++++     R+   +L  S D   F  T +     
Sbjct: 100 ERELLKEGLTRHDLGREKFLERVWDWMNRYRGRIREQLRILGASCDWTRFRFTMDPGPSR 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R  +K++ DKG IY+G     +  R     +D EV  
Sbjct: 160 AVRTAFKRLYDKGLIYRGERLINWCPRCMTALSDLEVDH 198


>gi|269120241|ref|YP_003308418.1| valyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614119|gb|ACZ08487.1| valyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 883

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 72/386 (18%), Positives = 139/386 (36%), Gaps = 44/386 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 +       ++      +F R+     K L    +    I P        ++++ 
Sbjct: 338 HHHSVGHCYRCGTVIEPRVSNQWFVRMQPLAKKALEVVRNGEITISPQRWIKVYYNWLE- 396

Query: 203 GLKDLSLSRKTFDWGIKIP--------------------------------DDPQYIMYV 230
            ++D  +SR+   WG +IP                                 +   ++  
Sbjct: 397 NIRDWCISRQ-LWWGHRIPAYYSEDGTIFVAKSLEEAKQQAKEKYGKEVELREETDVLDT 455

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +       KF+P D  V   DI+ F    +   +  L   +P   
Sbjct: 456 WFSSQLWPFSTMGWPEKTK-DFEKFFPTDALVTAADIIFFWVSRMIMISEYLFDEIPFKY 514

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              +      KG K+SK+LGN  DP+++I++ G DA+R+ L+   + G+D F+ +  L+ 
Sbjct: 515 VYLNGIVRDEKGRKMSKTLGNSPDPLDLIDKYGADAIRFSLLYNTSQGQDIFFSEKLLE- 573

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQN 407
            + A+ +N + N  S+ V   L+D+D         F   D  ILS      + +   +  
Sbjct: 574 -MGANFSNKVWN-ASKFVLQNLEDFDYKTSISDLEFKLEDRWILSKLQNAAKGVNNALDG 631

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  A             D Y +A K         D+  T  +V   ++     LL  F
Sbjct: 632 YELDMAAKTAYEFFRGEFCDWYVEAAKTRVYGGDEQDK-KTAQWVLRHILDNGLKLLHPF 690

Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491
           +P +  +++  + +  E        +
Sbjct: 691 MPFITEELWQKVKLDGETIMLSDFPK 716



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I           H+GH     I D + R+ R+ G D L+  GTD  G       
Sbjct: 34  EKPGYSIVIPPPNVTGILHMGHILNNSIQDTMIRWKRMSGFDALWMPGTDHAGIATQNKV 93

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +   +                 T  + +++          L  S D      T ++   D
Sbjct: 94  EKWLMEEGTTKEEIGREKFLERTWEWKEKHGGIITKQLRRLGSSLDWKRERFTMDEGLSD 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             + ++ ++ +   IYKG Y   +  +D+    DDE+              PV+  +E
Sbjct: 154 AVKDVFIRLYNDDLIYKGEYIVNWCPKDKTALADDEIEHEEVTGKIWQIKYPVKDSDE 211


>gi|76664782|emb|CAJ17829.1| methionyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 280

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 118/283 (41%), Positives = 176/283 (62%), Gaps = 6/283 (2%)

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           + NS   + + D++ +SYD FI+TT+K H  + + ++ K+  +GDIY G Y G YS+ +E
Sbjct: 2   NHNSSEIKRIYDLMQVSYDYFIKTTDKAHQASVQAIFDKLHQQGDIYLGRYQGLYSVAEE 61

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           AY ++ ++  G           P+  + E+ YFF+LS YQ KLL Y ES+P+ I P  +R
Sbjct: 62  AYISEKDLVDGKT----FNGETPI-LITEKTYFFKLSKYQSKLLDYLESNPDLIKPKTQR 116

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD-GSK 252
            E+++ +K  L DLS+SR +F WGI +  + ++++YVWIDAL+NYLT  GY  N      
Sbjct: 117 KELLNLLKEPLDDLSISRTSFKWGIPVSFEQKHVIYVWIDALSNYLTGLGYHPNETSQQF 176

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             +WP DLHVIGKDILRFH IYWP  L++  + LPK+   H +IL    K+SKS GNV+ 
Sbjct: 177 LHYWPCDLHVIGKDILRFHLIYWPILLMALKIKLPKQFLIHPWILFDKNKMSKSKGNVLY 236

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
             ++++   VD +RYF++ EI    DG    + L +R N+DL 
Sbjct: 237 VDDLLKIFSVDTIRYFVLHEIPYANDGNITYELLAERHNSDLV 279


>gi|163747198|ref|ZP_02154553.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379473|gb|EDQ03887.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 977

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 141/386 (36%), Gaps = 19/386 (4%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
            +RT E+          K +   GD  K       +  D+ +   D++ + A     + +
Sbjct: 423 EMRTEEENLVPLIEAK-KIMQPFGDRSKVVIEPMLT--DQWFVATDKIVQPAIDAVRSGE 479

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              +   + + Y F      +      +      +P+   +E   +            + 
Sbjct: 480 VTILPEQDRKVY-FHWLENIEPWCISRQLWWGHQIPVWFDDEGNEYC----APTEAEAQA 534

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
              G  +  DP  ++  W  +    + T G+ +       K++P  + V G DI+ F   
Sbjct: 535 MAPGKTLRRDPD-VLDTWFSSGLWPIGTLGWPEQTA-ELEKYFPTSVLVTGFDIIFFWVA 592

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +    + +    P             KG+K+SKSLGNV+DP+E+I++ G DA+R+ L  
Sbjct: 593 RMMMMQYAVVDQKPFDTVYVHALVRDEKGKKMSKSLGNVLDPLELIDDYGADAVRFTLTS 652

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D       +      +    + N   R   M           P      ++ I+
Sbjct: 653 MAAMGRDLKLSTQRIAG--YRNFGTKLWN-AHRFAEMNNVFDSMPAAMPQPQATLNKWIV 709

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
              +R+ +E+   + N   + A   + + V     D Y +  KP  L + +   A+    
Sbjct: 710 GETARIREEVDAALGNFRFNDAANALYAFVWGKVCDWYVELSKP--LLQDDAPEAAETRA 767

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
               V+ Q  +LL   +P +  +++ 
Sbjct: 768 TMAWVLEQCLVLLHPIMPFITEELWQ 793



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 30/180 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   +           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  EHFSVMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMQGFDTLWQPGQDHAGIATQMVVER 95

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK--- 100
                             T KV+  +           R +    D S + F  +      
Sbjct: 96  ELAATGQPGRRELGREAFTAKVWEQKQKSGGTIIDQLRRLGASCDWSRNAFTMSGAPGAP 155

Query: 101 -----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQH 154
                  HD    ++  + +KG IY+G     +    E   +D EV     DG  ++ ++
Sbjct: 156 EGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVESTEVDGHMWHFKY 215


>gi|313611386|gb|EFR86080.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 242

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 112/242 (46%), Positives = 169/242 (69%), Gaps = 7/242 (2%)

Query: 34  LARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +AR+ RL G DV + TGTDEHGQKI   A+  G++ + +VD+ +  F+++   L+IS  D
Sbjct: 1   MARYKRLKGYDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTD 60

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND---DEVYKGADGQYY 150
           FIRTT+ RH  +   +++++ ++GDIY G Y GWYS+ DE Y+ +   +EVYK  +G+  
Sbjct: 61  FIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVI 120

Query: 151 NAQ---HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-KSGLKD 206
             +    N V+ ++EE   FR+S Y D+L+ YY SHPEFILP  R+NE+I+   K GL+D
Sbjct: 121 GGKAPSGNEVELVKEESXXFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLED 180

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L++SR TFDWGIK+P +P++++YVWIDAL+NY+T  GY  + D    K+WPAD+ ++GK+
Sbjct: 181 LAVSRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKE 240

Query: 267 IL 268
           I+
Sbjct: 241 IV 242


>gi|255994058|ref|ZP_05427193.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993726|gb|EEU03815.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 897

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 88/422 (20%), Positives = 164/422 (38%), Gaps = 52/422 (12%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L DE Y  + E    +  + Y   HN V+ +  E +F ++    
Sbjct: 322 YAGLDRYECRKRWVKRLDDEGYLVETEDMNISASECYR-CHNTVEPLISEQWFVKMKDLA 380

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              L   +S     +P +     + +++  ++D  +SR+   WG +IP            
Sbjct: 381 KPALDAAKSGKLKHIPKKYEKTYLEWLE-NIRDWCISRQ-LWWGHRIPAYTCTECGELVV 438

Query: 222 ---------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                             + ++  W  +    L+T G+ +  +     F+P ++ V G D
Sbjct: 439 SKEEVCECPSCKGKVVQDEDVLDTWFSSALWPLSTLGWPEKSE-DFDYFYPTNVLVTGYD 497

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    + + A  L   LP              G+K+SKSLGN IDP+++I+E G DA
Sbjct: 498 IIFFWVVRMVFTALELDGRLPFDNVYIHGLVRDKDGQKMSKSLGNGIDPLKIIDEYGADA 557

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-------- 376
           LR+ L+  I+ G D  Y ++ +    N   AN + N  +R + M L   +          
Sbjct: 558 LRFMLLTGISAGSDIRYQEEKIIAARN--FANKLWN-AARFIFMSLGQIENEGIDIKKID 614

Query: 377 -IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
                      D  ++    R +  ++ NM    I  A  ++  L+     D Y +  K 
Sbjct: 615 VKNEESLLGTEDRWMIESIHRAMDYMKNNMDKYEIALAGQKIYDLIWNEYCDWYIEVIK- 673

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF----DILFVADENRCFQSL 489
             +  ++    +  + V +E +  +  LL  F+P +  +I+    +     DE+    S+
Sbjct: 674 GRIFGSDTADKAVAISVAIECMANMLKLLHPFMPYITEEIWSYIPEQFKEDDEDMLVSSV 733

Query: 490 DQ 491
            +
Sbjct: 734 WE 735



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 22/171 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   +           H+GHA +  + D + R+ R+ G + L+  GTD         
Sbjct: 45  TKKQPFTVVMPPPNITGVLHMGHALDQSLQDAIIRYKRMRGFEALWIPGTDHASIATEVK 104

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
             N                       + ++      +    L +S D     F  T ++ 
Sbjct: 105 ILNEVKEEGLSKEELGRERFLERAWQWNERYGNKIVEQCKKLGVSADWSRKRF--TMDEV 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
                +  +  + +KG IYKG     Y        +D EV        Y  
Sbjct: 163 CSKAVKEYFVHLYEKGYIYKGKKIINYCPVCRTSLSDAEVEHEEKNGKYWY 213


>gi|307299268|ref|ZP_07579069.1| valyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915064|gb|EFN45450.1| valyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 867

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 140/399 (35%), Gaps = 39/399 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+        L ++ +    E    A G+ Y      V+    + ++ ++    
Sbjct: 308 YKGLDRYEARKQIVKDLEEQGFLIKVEPMVHAVGRCYR-CETVVEPCLSDQWYVKVGPLA 366

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD------------------ 215
           +K +   E       P     +V     + ++D  +SR+ +                   
Sbjct: 367 EKAIEAVEEGSVTFFPETW-KKVYLNWMNEIRDWCISRQLWWGHRVPVWYCDDCNEVIVE 425

Query: 216 ---------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                     G K     + ++  W  +     TT G+ +  +     F+P  + V   D
Sbjct: 426 EQDPSVCPKCGSKNIRQDEDVLDTWFSSQLWPFTTLGWPEKTE-DLESFYPTSVLVTAFD 484

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    +    +      P      +       G K+SKSLGN IDP++VI E G DA
Sbjct: 485 IIFFWVARMIMAGYHFMGEKPFNHVYITRLIRDKNGRKMSKSLGNGIDPLDVIRENGTDA 544

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +R+ L    A   D   D       +    AN I N  +R   + ++ ++ +        
Sbjct: 545 MRFTLAILAAQNHDIKLDVRFFD--IYKKFANKIWN-AARFALLNMEGFEKVNLDEEELA 601

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPD 442
             D  ILS  ++ ++ + E++       A   + S       D Y ++ KP  L +    
Sbjct: 602 IEDRWILSRLAKSVKAVEESIDGYDFPSASKMIYSFFWNEFCDWYIESTKP-RLNREGRS 660

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           R      V V  +     +L  F+P +  +++  L  +D
Sbjct: 661 RI-VAQNVLVRTLDASLRMLHPFMPYITEELWQNLPGSD 698



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 20/173 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
           +  I  PN  A  H+GHA  ++I D++ RF R+ G   L+  G D  G     A +    
Sbjct: 37  TIMIPPPNITAPLHMGHALNLVIQDIIIRFKRMKGYRALWVPGEDHAGIATQNAVEKDLA 96

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
                           TT  +  +  +  R+  + +  S D      T ++   +  R  
Sbjct: 97  KKGTNRKELGRERFLETTWNWAKEYRQRIREQIEAMGCSVDWSRERFTMDEGLSEAVRKA 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  +  +G IY+G Y   +  R     +D+EV    +   +     P++  +E
Sbjct: 157 FVMLYKEGLIYRGKYIVNWCPRCSTVLSDEEVEHEDEKGAFYHIKYPIKDSDE 209


>gi|149915811|ref|ZP_01904336.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810393|gb|EDM70238.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 975

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 14/312 (4%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS---RKTFDWGIKIPDDPQYIMYV 230
              L   E               + + + G +  + S         G  +  D   ++  
Sbjct: 490 FHWLENIEPWCISRQLWWGHQIPVWYDEDGTQYCAASEEEAIAMAGGKALTRDED-VLDT 548

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +    + T G+ D+ +  K K++P  + + G DI+ F    +    + +    P   
Sbjct: 549 WFSSGLWPIGTLGWPDDTEELK-KYFPTSVLITGFDIIFFWVARMMMMQYAVVGQKPFSH 607

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                     KG+K+SKSLGNV+DP+++I++ G DA+R+ L    A G+D    KD +  
Sbjct: 608 VYVHALVRDEKGKKMSKSLGNVLDPLDLIDDYGADAVRFTLTAMAAMGRDLKLSKDRIAG 667

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
               +    + N    +        DG IP P A    ++ I+   ++V + + E +   
Sbjct: 668 --YRNFTTKLWNAARFAEMNGATSSDGTIPQPDAT--VNKWIIGETAKVRETVDEALAAF 723

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             + A   + + V     D Y +  KP  L   +  RA T       VI Q  ILL   +
Sbjct: 724 RFNDAANALYAFVWGKVCDWYVEFSKPLLLDGDDATRAET-QATMAWVIDQCLILLHPIM 782

Query: 467 PKLANKIFDILF 478
           P +  +++  L 
Sbjct: 783 PFVTEELWGTLG 794



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 61/196 (31%), Gaps = 29/196 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 37  EPFCIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGDDTLWQPGQDHAGIATQMVVER 96

Query: 65  AGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK--- 100
                               KV+  +           + +    D S + F  +      
Sbjct: 97  KLAAEGQPGRRELGRDKFLEKVWEWKTESGGTIINQLKRLGASCDWSRNAFTMSGAPGAP 156

Query: 101 -----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  + +KG IY+G     +    E   +D EV    +  +      
Sbjct: 157 AGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIENPGHMWHFKY 216

Query: 156 PVQWMEEEGYFFRLSA 171
           P+   E   Y  R   
Sbjct: 217 PLAGGETYTYVERDED 232


>gi|220906506|ref|YP_002481817.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219863117|gb|ACL43456.1| valyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 1242

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/389 (20%), Positives = 141/389 (36%), Gaps = 62/389 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     + L+  +         ER  +V       LKD  +SR+   
Sbjct: 364 PVEPLLSTQWFVKIEPLAQQALADLDQQNSPQFVPERWAKVYRDWLVNLKDWCISRQ-LW 422

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +++  DP  ++  W  
Sbjct: 423 WGHQIPAWYAISETGGDITDHTPFIVAGNEREAREQAIAQFGPEVQLEQDPD-VLDTWFS 481

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D  +     ++P    V G DI+ F    +       +  +P      
Sbjct: 482 SGLWPFSTLGWPDRTE-DLDFYYPTSTMVTGFDIIFFWVARMTMMGKHFTGTMPFGDVYI 540

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                    +K+SK+ GN IDP+ +I++ G DALRY L+RE+A        +      + 
Sbjct: 541 HGLVRDENNKKMSKTAGNGIDPLLLIDKYGADALRYTLIREVAGAGQDIRMEYNRKTDES 600

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  SR V + L  +       P       +D  ILS   +V+Q+ R
Sbjct: 601 ATVEASRNFANKLWN-ASRFVMLNLDGHTPAQLGFPNLADLELADRWILSRYQQVVQQTR 659

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           E ++   +  A   +   +     D Y +  K   L++    R      V   V+     
Sbjct: 660 EQIETYGLGEAAKGLYEFIWGDFCDWYIELVKA-RLREEGTSR-RVAQQVLAHVLEGTLK 717

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSL 489
           LL  F+P +  +++  L  AD +  F SL
Sbjct: 718 LLHPFMPHITEELWQTLTQAD-SETFLSL 745



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA+E  + DVL R+HR+ G + L+  GTD     ++   + 
Sbjct: 49  QPYCIVIPPPNVTGSLHMGHAFESALTDVLIRYHRMKGDNTLWLPGTDHASIAVSTILEK 108

Query: 65  AGVTT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              + +  +       +   R +   LD S + F  T ++    
Sbjct: 109 QLKAEGKTRRDLSREEYLQRAWAWKAESGGTIANQLRRLGASLDWSRERF--TMDEGLSR 166

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + ++  +G IY+G Y   +    ++  +D EV       +      P+
Sbjct: 167 AVIEAFIRLYREGLIYRGNYLVNWCPASQSAVSDLEVENQEVNGHLWHFRYPL 219


>gi|228991196|ref|ZP_04151154.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228768420|gb|EEM17025.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 1033

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 152/409 (37%), Gaps = 34/409 (8%)

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
              R    +      S+  FIRTTE R         +      D            R   
Sbjct: 386 HCWRCDSPLLYYAGESW--FIRTTEIR---------ETFLKNNDAVTWYPDHMKHGRFGK 434

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +    E     +         P+   E +        +  K +     H           
Sbjct: 435 FL---ENMVDWNISRKRYWGTPLNVWECKNC---DHQFAPKSIDELRKHSVGHT-----A 483

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   K  + ++ +  +    G  +   P+ ++ VW D+ +       Y         +
Sbjct: 484 ENLELHKPYVDEVKVCCEK--CGSSMTRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEE 540

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PAD+   G D     F+++   A L +  +P  + +     +  +G+K+SKS GN +D
Sbjct: 541 QFPADVIAEGVDQTRGWFYSLLAVAALYTGKVPYKRVLSLGHVLDEQGQKMSKSKGNALD 600

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILK 371
           P+E++E+ G DALR+ L+ + A      +  +   +   + L + + N+ S   +   L 
Sbjct: 601 PVELVEKFGADALRWALLVDSAPWNAKRFS-ERTVQEAKSKLVDTLVNVYSFYVLYTNLD 659

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF-- 428
            Y+         T+ DE +LS     ++++R  +       A  ++  LV EV + Y   
Sbjct: 660 KYNPKEKYEVKRTKLDEWVLSRLHSTVKQVRNALDEYQFTNAAREIAVLVDEVSNWYVRR 719

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + WE    NP++A+       EV+  L+ LL  F P +A  I   L
Sbjct: 720 SRNRFWE-SGMNPEKAAA-YETLHEVLVTLSKLLAPFTPFVAEDIHLNL 766



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +    D      T E  + ++   +   I
Sbjct: 106 EIEEYGIVPFIQKCKESVFTYEKQWREFTESIGYWVDMEAPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|323136665|ref|ZP_08071746.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397982|gb|EFY00503.1| valyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 905

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/337 (20%), Positives = 122/337 (36%), Gaps = 20/337 (5%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W +    +             +  H       E  N  +   +      + SR    
Sbjct: 409 PKNWEKTYFEWLENIQPWCVSRQLWWGHRIPAWYDEDGNVYVEETEEAAHVAARSRT--G 466

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
             + +  D   ++  W  +     +T G+ D      ++F+P ++ V G DI+ F    W
Sbjct: 467 ADVMLTRDED-VLDTWFSSALWPFSTLGWPDETP-ELSRFYPTNVLVTGFDIIFF----W 520

Query: 276 PAFLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++   L   K++      +       KG K+SKS GNVIDP+ +I+E G DALR+ L
Sbjct: 521 VARMMMMGLHFKKEIPFKDVYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTL 580

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
               A G+D       ++     + A  + N    +        D   P     T  +  
Sbjct: 581 AAMAAQGRDIKLSTQRVEG--YRNFATKLWNASRFAEMNGCARVDSYDPRANKVT-LNRW 637

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTV 447
           I+   +R ++E+   +     + A       V     D Y +  KP  L   +       
Sbjct: 638 IVGEAARTVREVSAAIDAYRFNEAAGAAYRFVWNVFCDWYVELTKP-LLTGPDGAEKDET 696

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
              T  V+ Q+  LL  F+P +  +++ I       R
Sbjct: 697 RATTAFVLDQIYALLHPFMPFITEELWAIKGAEGPKR 733



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 24/184 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L R+HR+ G DVL+  GTD  G       +  
Sbjct: 38  PYSIVIPPPNVTGSLHMGHALNNTLQDILVRYHRMKGEDVLWQPGTDHAGIATQMVVERQ 97

Query: 66  GVTTKV---------------FVD------QNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +                +        +     + +    D S + F  T ++    
Sbjct: 98  LMERQEPGRREMGREKFLERVWEWKAESGGKIVEQLKRLGASCDWSRERF--TLDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEE 163
               ++ ++   G +YK      +        +D EV  +   G  +  ++  V    EE
Sbjct: 156 AVAKVFVQLYRDGLLYKDKRLVNWDPVLHTAISDLEVLQQEVKGHLWRFKYPVVDDAGEE 215

Query: 164 GYFF 167
              F
Sbjct: 216 TGEF 219


>gi|256375306|ref|YP_003098966.1| valyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919609|gb|ACU35120.1| valyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 877

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 120/362 (33%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 351 HCSRCDTVIEPRLSMQWWVKVEPLARAAAEAVRDGRTTIHPPE-LAKRYFDWVENLNDWC 409

Query: 209 LSRKTFDWG--IKIPDDP----------------------QYIMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                      + ++  W  +     +T G+
Sbjct: 410 ISRQ-LWWGHRIPVWYGPNDEIVCVGPDEEPPSGEGWTRDEDVLDTWFSSGLWPFSTLGW 468

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA---FLLSANLPLPKKVFSHGFILHKGE 301
                   AKF+P  +   G DIL F  +       + +    P              G+
Sbjct: 469 PARTA-DLAKFYPTSVLSTGYDILFFWVVRMMMFGLYAMDGKQPFDHVFLHGLIRDAHGK 527

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP++ ++  G DA R+ L+R    G D    ++      + +    + N 
Sbjct: 528 KMSKSRGNGIDPLDWMDSYGADATRFTLLRGANPGSDLALAEEW--AAGSRNFTTKLWN- 584

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R       + +  +P     T+ D  +L +   ++ E+    +     R    +    
Sbjct: 585 ATRFALGNGANVERPLPDRSELTDVDRWVLDLLDGLITEVDAQFEAFQFSRISDALYKFT 644

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K         +RA +   V   V+ +L  LL    P +   ++  L  
Sbjct: 645 WDEFCDWYLELAK--VQIAEGGERAESTRLVLGHVLDKLLRLLHPLTPFVTEVLWTTLTG 702

Query: 480 AD 481
            +
Sbjct: 703 GE 704



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I       N   H+GHA    + D L+R  R+ G +VL+  GTD  G     A
Sbjct: 42  SDKPPFSIVLPPPNVNGSLHMGHALNHSVMDALSRRRRMQGYEVLWLPGTDHAGIATQTA 101

Query: 62  AQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            + A  +          + FV++                R + D +D S   F  T ++ 
Sbjct: 102 VERALASEGVSRHDLGREKFVERVWEWREEVGGRILGQMRRLGDGVDWSRVRF--TMDEG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + + ++KK+ D G IY+      +  R +   +D EV    D
Sbjct: 160 LSRSVQTIFKKLFDDGLIYRAERIINWCPRCQTALSDIEVDHSDD 204


>gi|45656371|ref|YP_000457.1| valyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81407853|sp|Q72V30|SYV_LEPIC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|45599605|gb|AAS69094.1| valyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 882

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/323 (20%), Positives = 122/323 (37%), Gaps = 12/323 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIK 219
           E         + + + +  +      L    R       K    ++S +  T     G +
Sbjct: 382 EFIPKMWEKTFFEWMNNIRDWCISRQLWWGHRIPAYHCKKCKHFEVSETAVTVCTSCGSQ 441

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
             +    ++  W  +     +T G+ D  +  K +++P  + V G DI+ F    +    
Sbjct: 442 EVEPDPDVLDTWFSSQLWPFSTLGWPDQTEDLK-RYYPTSVLVTGFDIIFFWVSRMIMMG 500

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P  K +         G+K SKS+GNVIDP+ ++++ G D+ R+FL   +  GK
Sbjct: 501 MKFMQAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMDKYGTDSFRFFLAATLPEGK 560

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVC 394
           D  +D+  L         N I N     +  + + +  +  TP         D+ ILS  
Sbjct: 561 DILFDESRLDG--YRSFCNKIWNSSRFILMNLEESFVPIGITPDIEKDLEPMDQWILSRF 618

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  L+E  +       +   A +   +     D Y +  KP    K +P  A     V  
Sbjct: 619 NHCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVSPRSAEVAKQVLS 678

Query: 453 EVIRQLAILLQAFVPKLANKIFD 475
           +V+ +   LL  F+P L  ++  
Sbjct: 679 DVLIRALGLLHPFMPFLTEEVHS 701



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 22/161 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE   I           HIGHA    I D+L R  R  G   L+  G D  G       +
Sbjct: 35  RESFSIVIPPPNVTGSLHIGHALNHTIQDILVRIERKKGKSTLWLPGMDHAGIATQMVVE 94

Query: 64  NA---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                        T + F+ +                + + + +D S + F  T ++   
Sbjct: 95  RELAKESKKRTDFTREEFIHKVWEWKNHSGGMITKQQKLLGESVDWSRERF--TLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                ++K + D+G IY+G     +    +   +D EV   
Sbjct: 153 KAVFKVFKSLYDEGLIYRGERIINWCPASQTAISDLEVEFR 193


>gi|161484946|ref|NP_713943.2| valyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|90101529|sp|Q8EZT8|SYV_LEPIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|293386243|gb|AAN50961.2| valyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 882

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/323 (20%), Positives = 122/323 (37%), Gaps = 12/323 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIK 219
           E         + + + +  +      L    R       K    ++S +  T     G +
Sbjct: 382 EFIPKMWEKTFFEWMNNIRDWCISRQLWWGHRIPAYHCKKCKHFEVSETAVTVCTSCGSQ 441

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
             +    ++  W  +     +T G+ D  +  K +++P  + V G DI+ F    +    
Sbjct: 442 EVEPDPDVLDTWFSSQLWPFSTLGWPDQTEDLK-RYYPTSVLVTGFDIIFFWVSRMIMMG 500

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P  K +         G+K SKS+GNVIDP+ ++++ G D+ R+FL   +  GK
Sbjct: 501 MKFMQAPPFHKVLIHGLVRDKDGKKFSKSVGNVIDPLVMMDKYGTDSFRFFLAATLPEGK 560

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVC 394
           D  +D+  L         N I N     +  + + +  +  TP         D+ ILS  
Sbjct: 561 DILFDESRLDG--YRSFCNKIWNSSRFILMNLEESFVPIGITPDIEKDLEPMDQWILSRF 618

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  L+E  +       +   A +   +     D Y +  KP    K +P  A     V  
Sbjct: 619 NHCLEEYNKAHSKFHFYEMAAAIYEFIWGDFCDWYIELVKPRAYGKVSPRSAEVAKQVLS 678

Query: 453 EVIRQLAILLQAFVPKLANKIFD 475
           +V+ +   LL  F+P L  ++  
Sbjct: 679 DVLIRALGLLHPFMPFLTEEVHS 701



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 22/161 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE   I           HIGHA    I D+L R  R  G   L+  G D  G       +
Sbjct: 35  RESFSIVIPPPNVTGSLHIGHALNHTIQDILVRIERKKGKSTLWLPGMDHAGIATQMVVE 94

Query: 64  NA---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                        T + F+ +                + + + +D S + F  T ++   
Sbjct: 95  RELAKESKKRTDFTREEFIHKVWEWKNHSGGMITKQQKLLGESVDWSRERF--TLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                ++K + D+G IY+G     +    +   +D EV   
Sbjct: 153 KAVFKVFKSLYDEGLIYRGERIINWCPASQTAISDLEVEFR 193


>gi|315927239|gb|EFV06585.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 249

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 108/252 (42%), Positives = 163/252 (64%), Gaps = 6/252 (2%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGY 244
           +P  ++NE+I+FV++GLKDLS++R +FDWGIK+P    D ++I+YVW+DAL  Y+++  +
Sbjct: 1   MPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYVSSLDF 60

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +      AKFWPA +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+S
Sbjct: 61  QNKG--ENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 118

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P EV++  G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R
Sbjct: 119 KSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNR 178

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            + M  K   G I   G     +   L+     L    E ++N   +R L ++   +S  
Sbjct: 179 IIGMSTKYSQGNISKEGVLKFYNAE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVA 237

Query: 425 DRYFDAQKPWEL 436
           +      +PW L
Sbjct: 238 NLAISKYEPWSL 249


>gi|297624909|ref|YP_003706343.1| valyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297166089|gb|ADI15800.1| valyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 925

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 87/362 (24%), Positives = 144/362 (39%), Gaps = 49/362 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +FF++S    K+L+  ++    + P  R  +V       L+D ++SR+   
Sbjct: 359 PVEPILSTQWFFKMSEVAPKVLAALDAGEMRLTPE-RYTKVNRDWLLSLRDWNISRQ-LW 416

Query: 216 WG--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG  I    DP+  +YV                              W  +     +T G
Sbjct: 417 WGHQIPAWYDPEGNIYVPDPQNPDLDPPDDPRYAHLTLTQDPDVFDTWFSSNLWPFSTLG 476

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D  D    KF+P  + V G DIL F    +   ++ L    P    V     +   G+
Sbjct: 477 WPDTEDPFFKKFFPTSVLVTGYDILFFWVTKMQLASYALLDQKPFSDIVLHGLVLDEHGQ 536

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K SKS GN IDP++VI E G DALR+ +       +D  +D   ++  +  +  N + N 
Sbjct: 537 KQSKSKGNGIDPLDVIAEAGADALRFAMAYASTGAQDIRWDPRRVE--MGRNFGNKLWNA 594

Query: 362 VSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           V R   M L D          P A   +   I S   R +QE+  +++   +  A     
Sbjct: 595 V-RFAMMHLGDPPLPPLQGGVPEAGGLTSRWITSRLQRAIQEVTRHLEAFDLGGASRAAY 653

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V     D Y +A KP EL+  N +       V    +  +  LL   +P + +++++ 
Sbjct: 654 DFVWSEFCDWYLEAAKP-ELRAGNQE----TRVVLRRTLTDILKLLHPLMPFITSELYEA 708

Query: 477 LF 478
           L 
Sbjct: 709 LG 710



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 22/160 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA++  + D L RF R+ G + LF  GTD  G      
Sbjct: 40  SDKPGFCIVIPPPNVTGSLHLGHAFDNTLIDTLIRFKRMRGFEALFQPGTDHAGISTQVQ 99

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            + A  +                   + ++           L IS D     F  T ++ 
Sbjct: 100 VERALQSEGLTKHDLGREAFLARMWAWKERYGGIILGQLQRLGISADWTRTRF--TMDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                R  + ++  +G IY+G     +    +   +D EV
Sbjct: 158 LSRAVRKQFVELYHRGLIYRGERIVNWDPVSQTTLSDLEV 197


>gi|158335764|ref|YP_001516936.1| valyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306005|gb|ABW27622.1| valyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 1123

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/406 (19%), Positives = 138/406 (33%), Gaps = 60/406 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      + L++ +         ER  +V       L+D  +SR+   
Sbjct: 355 PVEPLISTQWFVKTEPLAKRTLAFLDDQNSPEFIPERWTKVYRDWLVNLRDWCISRQ-LW 413

Query: 216 WGIKIP------------------------------------------DDPQYIMYVWID 233
           WG +IP                                           DP  ++  W  
Sbjct: 414 WGHQIPAWYAISETEGEIREDTPFVVAENAESAQQKAVEQFGPDVQLLQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +      + ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPEETA-DLSTYYPTATLVTGFDIIFFWVARMTLMAGHFTGEMPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFY-----DKDG 345
                    +K+SKS  N IDP+ +I++ G DALRY L+RE+A  G+D          + 
Sbjct: 532 HGLVRDENNKKMSKSSNNGIDPLILIDKYGTDALRYTLIREVAGAGQDIRLEYNRTTDES 591

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  SR V M LK         P       +D  ILS   R++Q+ R
Sbjct: 592 TSVEASRNFANKLWN-ASRFVLMNLKGQTPEQLGQPAIADLELADRWILSRYHRLVQQTR 650

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +    +  A   +   +     D Y +  KP  L++               V+     
Sbjct: 651 NQVDAYGLGEAAKGLYEFIWGDFCDWYIELVKP-RLRQEGTTSQRVAQQTLAYVLEGTLK 709

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           L   F+P +  +I+  L      +   S          L     P+
Sbjct: 710 LFHPFMPHITEEIWQTLTQPTSEQYLASQPYPEAADIQLVTETVPL 755



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 19/169 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA+E  + DVL R+HR+ G + L+  GTD     +    + 
Sbjct: 40  DPYCIVIPPPNVTGSLHMGHAFEAALIDVLIRYHRMIGDNTLWLPGTDHASIAVHTILEK 99

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                K +  ++          L +S D      T ++      
Sbjct: 100 QLQAEGKTRYDIGRDEFLERAKRWKAESGGKIVHQQRRLGVSVDWTRERFTMDEGLSKAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
              + ++ ++G IY+G Y   +    ++  +D EV     DG  ++ ++
Sbjct: 160 NKAFVQMHEEGLIYRGNYMVNWCPASQSAVSDQEVENKEVDGHLWHFRY 208


>gi|218533035|ref|YP_002423851.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218525338|gb|ACK85923.1| valyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 906

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 129/340 (37%), Gaps = 17/340 (5%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIP 221
           E  FF+     +      +      +P+    E  I   +S    ++ ++      + + 
Sbjct: 408 EKIFFQWLENIEPWCVSRQLWWGHQIPVWYDAEGGIFVTESEADAVAQAKAKHGREVALT 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+ F    +      
Sbjct: 468 RDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDIIFFWVARMMMMGLH 525

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+   P             KG K+SKS GNV+DP+++I+  G DALR+ L    A G+D 
Sbjct: 526 LTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAALAAPGRDI 585

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                 ++     + A  + N  +R   M   +              +   L+  ++ + 
Sbjct: 586 KLGPQRVEG--YRNFATKLWN-AARFAEMNGCELKADFRPEAVRETLNAWALTEAAKAVT 642

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVI 455
           E+ + +     + A A     V     D Y +  KP  L+    +P   +        +I
Sbjct: 643 EVAQGITVYRFNDAAAAAYRFVWNVFCDWYLELAKP-VLQGEGVDPAARAETQATVAFLI 701

Query: 456 RQLAILLQAFVPKLANKIF----DILFVADENRCFQSLDQ 491
            Q+A LL  F+P L  +++     +L         +S  +
Sbjct: 702 DQIAKLLHPFMPFLTEELWAIKGQVLPTPRGLLALESWPE 741



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    I D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  EPFSIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             + T+                +  +           + +    D S + F  T ++   
Sbjct: 96  KLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  +  +G IY+      +  + +   +D EV +     +      PV
Sbjct: 154 RAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPV 207


>gi|320450562|ref|YP_004202658.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150731|gb|ADW22109.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 891

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 148/404 (36%), Gaps = 50/404 (12%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E          +    P+++     ++  +    +K++   E      +P   +   + 
Sbjct: 362 KEEDYTIQMATCSRCGTPLEYAIFPQWWLSMKPLAEKVIRGLERDEIAFVPERWKKVNLD 421

Query: 199 FVKSGLKDLSLSRKTFD--------------------------------WGIKIPDDPQY 226
           ++K  ++D ++SR+ +                                  G       + 
Sbjct: 422 WLK-NVRDWNISRQLWWGHQIPAWYCQDCQAVNVPHPERYLEDPSTCEACGSPNLKRDED 480

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           +   W  +    L+T G+ +  +  KA F+P D+ V G DIL           +      
Sbjct: 481 VFDTWFSSALWPLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFRGER 539

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  KG+K+SKS GNVIDP+E++E  G DALR+ L      G+D   D  
Sbjct: 540 PFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLTTGGQDIRLDLR 599

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            L      ++A    N +  +   +L   +         T +D  + S  SR + EI   
Sbjct: 600 WL------EMARNFANKLYNAARFVLLSREAFQAKADEPTLADRFMQSRLSRGVAEITRL 653

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +   + +A  +V  LV     D Y +A KP  LK  N    +  L    E +  L  LL
Sbjct: 654 YEALDLAQAAREVYELVWSEFCDWYLEASKP-ALKAGN----AFTLRTLEETLATLLKLL 708

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
              +P L ++++  L    E   F++  Q           F+ +
Sbjct: 709 HPIMPFLTSELYQAL-TGKEELAFEAWPQPKATDEEAEARFEAL 751



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ R+ G + ++  GTD  G      
Sbjct: 60  SGKTPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMQGYEAVWLPGTDHAGIATQVV 119

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +   +                    + +++          L  S D      T ++   
Sbjct: 120 VERLLLKEGKTRHDLGREAFLKRVWEWKEESGGTILKQLKRLGASADWSREAFTMDEARS 179

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + +   +G  Y+      +  R E   +D EV
Sbjct: 180 KAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEV 217


>gi|254821843|ref|ZP_05226844.1| valyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 882

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 128/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F R+ +          +    I P        ++V   ++D ++SR+   
Sbjct: 360 PIEPRLSLQWFVRVESLAKAAGDAVRNGDTVIHPASLEPRWFAWVDD-MRDWTISRQ-LW 417

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 418 WGHRIPIWYGPNGEQVCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTLGWPDKTP-ELE 476

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 477 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDES 536

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 537 GRKMSKSKGNVIDPLDWVELFGADALRFTLARGASPGGDLAIGEDHV--RASRNFCTKLF 594

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   +        +P P   T++D  IL     V  E+     N    RA   +  
Sbjct: 595 N-ATRYALLNGAQL-ASLPPPAELTDADRWILGRLEEVRAEVDSAFDNYEFSRACEALYH 652

Query: 420 LVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  +    V    +  L  LL   +P +   ++  
Sbjct: 653 FAWDEFCDWYVE------LAKTQLAEGVAHTTAVLAATLDTLLRLLHPVIPFITEALWQA 706

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L     N      D     G  L
Sbjct: 707 L---THNETLVIADWPQPSGIAL 726



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA E  + D L R  R+ G +VL+  G D  G       +
Sbjct: 42  KPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSVVE 101

Query: 64  N--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +           R + D +D S D F  T ++   
Sbjct: 102 KQLAVDGKTKEDFGRELFVEKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEGLS 159

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 160 RAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDIEVDY 199


>gi|183983752|ref|YP_001852043.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M]
 gi|183177078|gb|ACC42188.1| valyl-tRNA synthetase protein ValS [Mycobacterium marinum M]
          Length = 886

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 128/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        ++V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASLEPRWFAWVDD-MHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 419 WGHRIPIWYGPNGEKVCVGPDETPPQGWEQDSDVLDTWFSSALWPFSTLGWPELTP-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                 A +P              
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGGDEVITLDGRRGAQVPFTDVFLHGLIRDEF 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ I+  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 538 GRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGSDLAVGEDAV--RASRNFGTKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   +       + P  G  T++D  IL     V  E+     +    RA   +  
Sbjct: 596 N-ATRYALLNGAALAPLPPL-GELTDADRWILGRLEEVRAEVDSAFDSYEFSRACEALYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  S    V    +  L  LL   +P +   ++  
Sbjct: 654 FAWDEFCDWYVE------LAKTQLAEGLSATTAVLAAGLDTLLRLLHPVIPFITEALWQA 707

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L    E+       Q    G  L
Sbjct: 708 L-TGQESLVIADWPQ--PSGITL 727



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 41  SSKPPYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQTV 100

Query: 62  AQNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 101 VEKQLAADGKTKEDFGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 159 LSRAVRTIFKRLYDAGLIYQAERLVNWSPVLQTAISDLEVNY 200


>gi|257063884|ref|YP_003143556.1| valyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791537|gb|ACV22207.1| valyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 889

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/422 (18%), Positives = 146/422 (34%), Gaps = 54/422 (12%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           C        ++    D          +     + ++    E +F  +   +   L    +
Sbjct: 319 CRVAIVKWFEDHGLLDHVDDHDHSVMHCYRCDSTLEPWLSEQWFVGVDKLKGPALDVVNN 378

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------- 221
                 P  R  +  +     LKD  +SR+   WG +IP                     
Sbjct: 379 GQVKFHPD-RWTQTYTTWMENLKDWCISRQ-LWWGHRIPVFYCDECGWEDALMEDVDTCP 436

Query: 222 ------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
                    + ++  W  +      T G+ DN D  +    P  + V  +DI+      +
Sbjct: 437 KCGGHVHQDEDVLDTWFSSQLWTFATQGWPDNLDELEGHH-PTKVLVTARDIIALWVARM 495

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +   +  +P          +   G ++SKS GN +DP+++I   G DA+RY L+  +
Sbjct: 496 VMSSLYFTGQIPFEDVFIYATILAKDGSRMSKSKGNGVDPMDLINMYGADAMRYNLLTLV 555

Query: 334 ACGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTES 386
              +D  +D D       L      D A G    +  +   ++ + DG  P  P A T +
Sbjct: 556 TGSQDVKFDADIDPKTHELLGSPRTDAARGFVTKIWNASRFVMMNLDGYTPGEPVAATAA 615

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D  I S  +++ + I + ++         ++         D Y +  K   L+    +RA
Sbjct: 616 DAWIFSRLAKLTKSITDGIEAYEFGDVSRELYDFFWNEFCDWYIEMTKD-RLRGEGEERA 674

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                  V V+     LL   +P +   I++ L VA+            +P  M+ +  D
Sbjct: 675 -VAQRNLVYVLDTALRLLHPVMPFVTEAIWEHLPVAE-----------GQPALMVAQWPD 722

Query: 505 PI 506
           P+
Sbjct: 723 PV 724



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA +  I D   R+ R+ G    +  GTD  G            
Sbjct: 37  TVVIPPPNVTGMLHMGHALDDTIQDTFIRYCRMRGYSTRWILGTDHAGIATQTKVDKKLK 96

Query: 68  ----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                             + +  Q      +    +  S  +DD   T    +    R +
Sbjct: 97  AEGISRLEIGREKFLEACQDWRVQYGGIIVEQIKRMGCSVDFDDEKFTMSPEYAKAVRKV 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +        IY+G     +        +DDE     +  +      P+
Sbjct: 157 FVDWYHDDLIYRGKRIVNWCPNCTTAISDDEAEYQDEHGHLWHLRYPL 204


>gi|55981138|ref|YP_144435.1| valyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|14286172|sp|P96142|SYV_THETH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|66773799|sp|Q5SJ45|SYV_THET8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12084715|pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|12084716|pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|28948386|pdb|1IVS|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|28948387|pdb|1IVS|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|33357071|pdb|1IYW|A Chain A, Preliminary Structure Of Thermus Thermophilus Ligand-Free
           Valyl-Trna Synthetase
 gi|33357072|pdb|1IYW|B Chain B, Preliminary Structure Of Thermus Thermophilus Ligand-Free
           Valyl-Trna Synthetase
 gi|18844753|dbj|BAB85225.1| valyl-tRNA synthetase [Thermus thermophilus]
 gi|55772551|dbj|BAD70992.1| valyl-tRNA synthetase (valine--tRNA ligase) (ValRS) [Thermus
           thermophilus HB8]
          Length = 862

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/378 (21%), Positives = 145/378 (38%), Gaps = 50/378 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +    P+++     ++ R+    +++L          +P  R  +V       +KD ++
Sbjct: 344 CSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPE-RWKKVNMDWLENVKDWNI 402

Query: 210 SRKTFD--------------------------------WGIKIPDDPQYIMYVWIDALTN 237
           SR+ +                                  G       + +   W  +   
Sbjct: 403 SRQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALW 462

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGF 295
            L+T G+ +  +  KA F+P D+ V G DIL           +      P    +     
Sbjct: 463 PLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLV 521

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  KG+K+SKS GNVIDP+E++E  G DALR+ L+     G+D   D   L      ++A
Sbjct: 522 LDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWL------EMA 575

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
               N +  +   +L   +G        T +D  + S  SR ++EI    +   + +A  
Sbjct: 576 RNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAR 635

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V  LV     D Y +A KP  LK  N    +  L    EV+  L  LL   +P L +++
Sbjct: 636 EVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHPMMPFLTSEL 690

Query: 474 FDILFVADENRCFQSLDQ 491
           +  L    E    ++  +
Sbjct: 691 YQAL-TGKEELALEAWPE 707



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ R+ G + ++  GTD  G      
Sbjct: 31  SGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVV 90

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +   +                    + +++          L  S D      T +++  
Sbjct: 91  VERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + +   +G  Y+      +  R E   +D EV
Sbjct: 151 RAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEV 188


>gi|159030421|emb|CAO91322.1| valS [Microcystis aeruginosa PCC 7806]
          Length = 906

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 139/407 (34%), Gaps = 59/407 (14%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE  +            Y +    PV+ +    +F ++     K L+  +         E
Sbjct: 328 DEDGFLVKIEAYRHSVPYSDRGKVPVEPLLSTQWFVKIEPLATKALTCLDQENSPRFVPE 387

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG---------------------------------- 217
           R  +V       LKD  +SR+   WG                                  
Sbjct: 388 RWTKVYRDWLVKLKDWCISRQ-LWWGHQIPAWYIISETNNEITNHTPFVVAWDETSALAK 446

Query: 218 --------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                   I I  DP  ++  W  +     +T G+ +        ++P    V G DI+ 
Sbjct: 447 AKQEYGEDIIIQQDPD-VLDTWFSSGLWPFSTMGWPEKTLDLDT-YYPTTTLVTGFDIIF 504

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +   A   +  +P              G+K+SKS  N IDP+ +I++ G DALRY
Sbjct: 505 FWVARMTMMAGYFTRQMPFKDVYIHGLVRDENGKKMSKSANNGIDPLILIDKYGTDALRY 564

Query: 328 FLVREIA------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIP 378
            L+RE+A        +      +        + AN I N  SR V M L+     +   P
Sbjct: 565 TLIREVAGAGQDISLQYNRKTDESESVEAARNFANKIWN-ASRFVMMNLEGKTPEELGEP 623

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                  +D  ILS   + +Q+ R+ ++N  +  A   +   +     D Y +  K    
Sbjct: 624 VLENLELADRWILSRYHQTVQKTRDYLENYGMGEAAKGLYEFIWRDFCDWYIELVKTRLW 683

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           K       +T       ++     LL  F+P +  +I+  L   ++ 
Sbjct: 684 KDKESVSCATARQTLAFILAGTLKLLHPFMPHITEEIWHNLTQENQQ 730



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I           H+GHA+E  + D L R+ R+ G + L+  GTD     +   
Sbjct: 34  KGGETYCIVIPPPNVTGSLHMGHAFESALIDTLVRYKRMTGKNTLWLPGTDHASIAVQAI 93

Query: 62  AQNAGVTTK------------VFVDQNSRN----FRDMADVLDISYD--DFIRTTEKRHH 103
                   K                Q          +    L +S D      T ++   
Sbjct: 94  LDRQLKAEKTDRYQLGREKFLERAWQWKEESGSTIVNQLRRLGVSVDWTRERFTMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + K+ + G IY+G Y   +     +  +D EV
Sbjct: 154 HAVRTAFIKLYEDGLIYRGQYLVNWCPESRSAVSDLEV 191


>gi|126656563|ref|ZP_01727824.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622249|gb|EAZ92956.1| valyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 907

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 84/383 (21%), Positives = 144/383 (37%), Gaps = 61/383 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L + + +       +R  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIDPLSQKALKFLDENNSPNFVPKRWEKVYRDWLIKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I++  DP  ++  W  
Sbjct: 414 WGHQIPAWYVISETNGEIADNTPFIVAHSEEEALEKAKKEYGNDIQLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +N +     ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPENTEDLNT-YYPTSTLVTGFDIIFFWVARMTMMAGYFTDQMPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKKRV 350
                   G+K+SKS  N IDP+ +IE+ G DALRY L+RE+A  G+D     D    + 
Sbjct: 532 HGLVRDENGKKMSKSANNGIDPLILIEKYGTDALRYTLIREVAGAGQDISLQYDRKTDQS 591

Query: 351 -----NADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R V M LK         P       SD+ ILS   + +Q+ R
Sbjct: 592 ESVEASRNFANKLWN-AARFVMMHLKGETPQSLGTPEIDKLELSDKWILSRFHQTVQQTR 650

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           E+++   +  A   +   +     D Y +  K   L +  P R          V+     
Sbjct: 651 EDIEAYGLGEAAKGLYEFIWGDFCDWYIELVKT-RLWEETPSR-DVARQTLAYVLDGTLK 708

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
           LL  F+P +  +I+  L  +++ 
Sbjct: 709 LLHPFMPHITEEIWQTLTQSNDQ 731



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 22/149 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           KE +   I           H+GHA+   + DVL R+HR+ G + L   GTD     +   
Sbjct: 37  KEGKTYCIVIPPPNVTGTLHMGHAFGDCLMDVLVRYHRMCGYNTLCLPGTDHASIAVHTI 96

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                                + A    +    +     + +    D S + F  T ++ 
Sbjct: 97  LDKQLKAEGITRKDIGRETFLEKAWQWKQESGGKIVNQMKRIGLSADWSRERF--TLDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSL 130
                R  + K+ + G IY+G Y   +  
Sbjct: 155 LSKAVRTAFVKLYEAGLIYRGNYLVNWCP 183


>gi|94269498|ref|ZP_01291478.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451195|gb|EAT02106.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 889

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 135/370 (36%), Gaps = 51/370 (13%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+      +F  +     +  +   +    +LP    N    +++  ++D  
Sbjct: 347 HCYRCQTVVEPSLSPQWFVAVKPLAQRATAAVRAGEIQLLPKMWHNTFYDWME-NIRDWC 405

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                                 ++  W  +     +
Sbjct: 406 ISRQ-IWWGHRIPAWSCQACGELVVAEESPDICPACGSANLSRESDVLDTWFSSALWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-- 298
           T G+ +     K  F+P  + +   DIL F    W A ++   L    +V      LH  
Sbjct: 465 TLGWPEQTRELK-MFYPTSVLITSFDILFF----WVARMMMMGLHFMDEVPFRHVYLHAL 519

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS GNV+DP+E+++  G DALR+ +    A G++    ++ ++       
Sbjct: 520 VRDKHGQKMSKSKGNVLDPLELMDRYGTDALRFTMAAFAAQGREIKLAEERIEG--YRHF 577

Query: 355 ANGIGNLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N + N    ++  +  +      D +       +  D  ILS  SRV   +   + +  
Sbjct: 578 INKLWNAARFTLMQLDDEGRSATEDALASDSATLSLPDRWILSRSSRVAAAVGGALDDFR 637

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A +     V     D Y +  KP EL    P        V + V+  +  +L   +P
Sbjct: 638 FNDAASAAYQFVWKEFCDWYLEWIKP-ELYGDEPAAVERSRRVLLTVLEDILKMLHPMIP 696

Query: 468 KLANKIFDIL 477
            +  +I+  L
Sbjct: 697 FVTEEIWHAL 706



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 36  EDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAGIATQNV 95

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++     +    L  S  +D    T +    
Sbjct: 96  VERQLADQGQSRHKLGREQFIERVWQWKEESGGQIINQLKRLGCSCDWDRERFTLDAGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++  +G IYKG Y   +  R      D EV     
Sbjct: 156 AAVKKVFVQLYREGLIYKGNYIINWCPRCLTALADIEVEHEEC 198


>gi|329934565|ref|ZP_08284606.1| valyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329305387|gb|EGG49243.1| valyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 874

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCRTTIEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEEPPSGEGWRQDSDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +    S AKF+P  + V G D+L F     + +  + +    P              G+
Sbjct: 472 PEQTG-SLAKFYPNSVLVTGYDLLFFWIARMMMFGLYAMDGAPPFRTIALHGMVRDQNGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNVINPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M      G +P     + +D  ILS  + V+ E+  + ++    +    +    
Sbjct: 588 ATRFALMNGATVQGPLPDASEMSSTDRWILSRLNSVVAEVDAHYEDYQFAKVSDALFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K     +   + A     V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSK--TTFQAGGEAAKVSGRVLGEVLDVTLRLLHPIVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SEKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 104

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                               Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELAKEGKSRHDLGREAFVERVWQWKAESGGQISGQMRRLGDGVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSQAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVDYQDD 207


>gi|21221073|ref|NP_626852.1| valyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|12643416|sp|O06851|SYV_STRCO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|6983757|emb|CAB75396.1| valyl tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 874

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGKVKIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P+                       ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPEGEVVCVGPGEEPPSGEGWYQDSDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 472 PEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQNGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  + V+ E+    ++    +    +    
Sbjct: 588 ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEVDAYYEDYQFAKLSDALFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K     +   + A     V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSK--TTFQAGGEAAEVSKRVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 104

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELGKEGKSRHDLGREAFVERVWQWKSESGGQISGQMRRLGDAVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSQAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 207


>gi|118618980|ref|YP_907312.1| valyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571090|gb|ABL05841.1| valyl-tRNA synthetase protein ValS [Mycobacterium ulcerans Agy99]
          Length = 886

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P +      ++ R+ +          +    I P        ++V   + D  +SR+   
Sbjct: 361 PFEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASLEPRWFAWVDD-MHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 419 WGHRIPIWYGPDGEKVCVGPDETPPQGWEQDSDVLDTWFSSALWPFSTLGWPELTP-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                 A +P              
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGGDEVITLDGRRGAQVPFTDVFLHGLIRDEF 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ I+  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 538 GRKMSKSKGNVIDPLDWIDTFGADALRFTLARGASPGSDLAVGEDAV--RASRNFGTKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   +       + P  G  T++D  IL     V  E+     +    RA   +  
Sbjct: 596 N-ATRYALLNGAALAPLPPL-GELTDADRWILGRLEEVRAEVDSAFDSYEFSRACEALYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  S    V    +  L  LL   +P +   ++  
Sbjct: 654 FAWDEFCDWYVE------LAKTQLAEGLSATTAVLAAGLDTLLRLLHPVIPFITEALWQA 707

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L    E+       Q    G  L
Sbjct: 708 L-TGQESLVIADWPQ--PSGITL 727



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 41  SSKPPYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQTV 100

Query: 62  AQNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 101 VEKQLAADGKTKEDFGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 159 LSRAVRTIFKRLYDAGLIYQAERLVNWSPVLQTAISDLEVNY 200


>gi|46199111|ref|YP_004778.1| valyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|81405885|sp|Q72JG7|SYV_THET2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46196735|gb|AAS81151.1| valyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 862

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/378 (21%), Positives = 144/378 (38%), Gaps = 50/378 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +    P+++     ++ R+    +++L          +P  R  +V       +KD ++
Sbjct: 344 CSRCGTPIEYAIFPQWWLRMKPLAEEVLKGLRRGDIAFVPE-RWKKVNIDWLENVKDWNI 402

Query: 210 SRKTFD--------------------------------WGIKIPDDPQYIMYVWIDALTN 237
           SR+ +                                  G       + +   W  +   
Sbjct: 403 SRQLWWGHQIPAWYCEDCQAVNVPKPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALW 462

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGF 295
            L+T G+ +  +  KA F+P D+ V G DIL           +      P    +     
Sbjct: 463 PLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLV 521

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  KG+K+SKS GNVIDP+E++E  G DALR+ L      G+D   D   L      ++A
Sbjct: 522 LDEKGQKMSKSKGNVIDPLEMVERYGADALRFALTYLATGGQDIRLDLRWL------EMA 575

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
               N +  +   +L   +G        T +D  + S  S+ ++EI    +   + +A  
Sbjct: 576 RNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSQGVEEITALYEALDLAQAAR 635

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V  LV     D Y +A KP  LK  N    +  L    EV+  L  LL   +P L +++
Sbjct: 636 EVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHPMMPFLTSEL 690

Query: 474 FDILFVADENRCFQSLDQ 491
           +  L    E    ++  +
Sbjct: 691 YQAL-TGKEELALEAWPE 707



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ R+ G + ++  GTD  G      
Sbjct: 31  SGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVV 90

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +   +                    + +++          L  S D      T +++  
Sbjct: 91  VERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + +   +G  Y+      +  R E   +D EV
Sbjct: 151 RAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEV 188


>gi|119489561|ref|ZP_01622321.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119454473|gb|EAW35621.1| valyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 912

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/387 (20%), Positives = 141/387 (36%), Gaps = 60/387 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F ++    DK L+  ++        ER  +V       L+D  +SR+   
Sbjct: 355 PIEPLLSTQWFVKIRPLADKALNCLDNEDNPGFVPERWMKVYRDWLVKLEDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +K+  +P  ++  W  
Sbjct: 414 WGHQIPAWYAVSETDGEITDNTPFVVAKTEAEAVKKATEKFGKDVKLQQEPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+        A ++P +    G DI+ F    +   A      +P      
Sbjct: 473 SGLWPFSTLGWPQETA-DLATYFPTNTLSTGFDIIFFWVARMTMMAGYFMDKMPFKTVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKKRV 350
               +   G+K+SK+ GN IDP+ +I + G DA+RY L++E I  G+D   + +  K   
Sbjct: 532 HGLILDENGKKMSKTAGNGIDPLLLINKYGTDAVRYTLIKEVIGAGQDIRLEYNREKDES 591

Query: 351 -----NADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIR 402
                + +  N I N  SR V M L+         P        D+ ILS   + +++  
Sbjct: 592 ASVEASRNFTNKIWN-ASRFVMMNLEGKTPQQLGKPDSEKLELCDQWILSRFHKTVKQTC 650

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           E +++  +  A  +    +     D Y +  KP  L+  N +           V+  +  
Sbjct: 651 EYLESYGLGEAAREQYEFIWGDFCDWYIELVKP-RLQGENTESKLVAQQTLAYVLEGIMK 709

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQ 487
           LL  F+P +  +I+  L    E  C  
Sbjct: 710 LLHPFMPHITEEIWHTLTQTGEETCLA 736



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 18/155 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAK 60
           E   I           H+GHA+   + D L R+HR+ G + L+  GTD         I +
Sbjct: 40  EPYCIMIPPPNVTGSLHMGHAFNNSLIDTLIRYHRMKGDNTLYLPGTDHASIAVHSVIER 99

Query: 61  AAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
             +  G T               + +Q+S         L IS D      T ++   +  
Sbjct: 100 QLKEEGKTRFDLGRDKFLERAWEWKEQSSGTITGQLRRLGISADWTRERFTLDEGLANAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ + G IY+G Y   +    E+  +D EV
Sbjct: 160 IEAFVRLYEDGLIYRGQYMVNWCPASESAVSDVEV 194


>gi|1814011|emb|CAA71837.1| valyl-tRNA synthetase [Thermus thermophilus]
          Length = 854

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 50/378 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +    P+++     ++ R+    +++L          +P  R  +V       +KD ++
Sbjct: 336 CSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPE-RWKKVNMDWLENVKDWNI 394

Query: 210 SRKTFD--------------------------------WGIKIPDDPQYIMYVWIDALTN 237
           SR+ +                                  G       + +   W  +   
Sbjct: 395 SRQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALW 454

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGF 295
            L+T G+ +  +  KA F+P D+ V G DIL           +      P    +     
Sbjct: 455 PLSTLGWPEETEDLKA-FYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLV 513

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  KG+K+SKS GNVIDP+E++E  G DALR+ L+     G+D   D   L      ++A
Sbjct: 514 LDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWL------EMA 567

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
               N +  +   +L   +G        T +D  + +  SR ++EI    +   + +A  
Sbjct: 568 RNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRTRLSRGVEEITALYEALDLAQAAR 627

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V  LV     D Y +A KP  LK  N    +  L    EV+  L  LL   +P L +++
Sbjct: 628 EVYELVWSEFCDWYLEAAKP-ALKAGN----AHTLRTLEEVLAVLLKLLHPMMPFLTSEL 682

Query: 474 FDILFVADENRCFQSLDQ 491
           +  L    E    ++  +
Sbjct: 683 YQAL-TGKEELALEAWPE 699



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ R+ G + ++  GTD  G      
Sbjct: 31  SGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVV 90

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K        +  + +    D S + F   T   
Sbjct: 91  VERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAF---TMDE 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +       + +   +G  Y+      +  R E   +D EV
Sbjct: 148 NAPAVPYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEV 187


>gi|90101527|sp|P36420|SYV_LACCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 385 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 444

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 445 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 504

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 505 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 564

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 565 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 621

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 622 KQVMDLSARFEFGEMGRTLYNFTWNVLADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 680

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 681 QILRLLHPVMPFVHGKLWLAL 701



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R++G D L+  G D  G      
Sbjct: 38  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAK 97

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 98  VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 158 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 200


>gi|73671043|ref|YP_307058.1| isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121725567|sp|Q465G4|SYI_METBF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7648799|gb|AAF65673.1|AF208389_1 isoleucyl-tRNA synthetase [Methanosarcina barkeri]
 gi|72398205|gb|AAZ72478.1| Isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 1058

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 152/407 (37%), Gaps = 68/407 (16%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ ++  E +F +++  +DK+L   +       P    +        G +D  
Sbjct: 396 HCWRCKTPIIYLATEQWFLKVTDIKDKMLEAID--AVDWYPEWAGSARFRTWVEGARDWC 453

Query: 209 LSRKTFDWGIKIPDDP-------------------------------------------- 224
           +SR+   WG+ IP                                               
Sbjct: 454 ISRQR-YWGMPIPVWKCKKCGKLEVIGTKAELLEKSGAGSDVELHRPYVDKLTIPCECGG 512

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                + +  VW D+      T  +    +    ++WPAD    G D     F++    +
Sbjct: 513 EKKRVEDVFDVWFDSAVASWATLKFPQTREQ-FDEWWPADFITEGHDQTRGWFYSQLGAS 571

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +     P    +     +   G+K+SKSLGNV+ PI+VI++ G D LR +++   A   
Sbjct: 572 MVGFGRAPYKSVLMHGFTLDAGGKKMSKSLGNVVSPIDVIDKYGADTLRAYVLSSSAPWD 631

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT----PGAFTESDESILS 392
           D  ++++ ++    +   N + N+    +  M L ++D +  +      A  E D  ILS
Sbjct: 632 DLKFNQEEVENVHRS--INILWNVFRFPLPYMALDNFDPLKVSLDSVKDALREEDRWILS 689

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVL 448
               V++ + E M    +H+A+ +++          Y    +P  W     +PD+ +   
Sbjct: 690 RIQSVVKAVDEAMSGYFLHKAVREILEFTLEDLSRWYIQLIRPRTWTEA-DDPDKLAA-Y 747

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            V  EV   L  L+  F+P LA +++  L    +    +S+     P
Sbjct: 748 RVLYEVYVTLTKLISPFMPYLAEEMYQNLIRNVDPNALESVHMCDWP 794



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++L+      Y     H+G A+  II D + R++ ++  ++L   G D HG  I   
Sbjct: 36  KTGKRLFFVDGPPYTTGHIHLGTAWNKIIKDSILRYYSMNNRNILERPGWDMHGLPIEVK 95

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
                             +N     K F     +   +    L +   ++    T +  +
Sbjct: 96  VEGVLGFKSKKDIESFGVENFIEKCKEFAINQKQEMTEQFQRLGVWMQWEAPYMTLKDDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      K+ S+K  +  G  S  +  R E    D EV  
Sbjct: 156 IEAAWWTLKQASEKNLLDVGKRSVNWCPRCETAIADSEVEY 196


>gi|323699457|ref|ZP_08111369.1| valyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459389|gb|EGB15254.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 888

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 134/403 (33%), Gaps = 23/403 (5%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                   + +     G  Y+        +  + + +   + + A     +      +  
Sbjct: 330 EAEGRVVEVVEHDHSVGVCYRCKSVIEPHVSTQWFVSMKPLAEKARAAVPDKTQIFPEHW 389

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            +  Y +        +           +P     E    + +              G   
Sbjct: 390 TKTYYQWLDEIRDWCISRQIWWGHR--IPAWTCEECGELIVAK----EDPTVCPKCGSSR 443

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
               + ++  W  +     +T G+ D+     AK++P    V G DIL F    W A ++
Sbjct: 444 LVQDEDVLDTWFSSALWPFSTMGWPDDTK-ELAKYYPTSCLVTGFDILFF----WVARMM 498

Query: 281 SANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              L    +V  H   +       +G+K+SKS GNVIDP+++I + G DALR+ L    A
Sbjct: 499 MMGLQFMGEVPFHHVYIHALVRDEQGKKMSKSTGNVIDPLDMIGKYGADALRFTLTSFAA 558

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D    +  ++        N + N  +R   M L D         A   +D  IL   
Sbjct: 559 MGRDIKLSEQRIEG--YKHFMNKVWN-ATRFAMMNLPDVIPDADVHEASDLADRWILHRL 615

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             V + +     +   +     +   +     D Y +  KP  L   +         V  
Sbjct: 616 EEVKETVASATNDYRFNEIAQTLYKFIWSEFCDWYLEMIKP-ALYGEDERAKEATQRVLW 674

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            V+ +  ILL    P +  +I+++L     +   + +     P
Sbjct: 675 TVLSETMILLHPVTPFITQEIWNVLPRPAGDDRSEDIATLPFP 717



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 18/166 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D+L RF+R  G +VL+  GTD  G       + 
Sbjct: 38  DPYSIVIPPPNVTGVLHMGHALNLTLQDILCRFNRQQGRNVLWVPGTDHAGIATQNVVER 97

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +   +       +  S D      T +++     
Sbjct: 98  QLKAEGLTRDDLGRDKFIERVWEWKKEKGDHILSQIRRMGASVDWTRECFTFDEQRAKAV 157

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           R ++  + ++G IYKG Y   +  R      DDEV       + + 
Sbjct: 158 REVFVALYEQGLIYKGDYIINWCNRCHTALADDEVEHENKPGHLHH 203


>gi|148243515|ref|YP_001228672.1| valyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851825|emb|CAK29319.1| Valyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 918

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 85/415 (20%), Positives = 144/415 (34%), Gaps = 67/415 (16%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                  Y +    PV+ +    +F +      +     +      +P  R ++V     
Sbjct: 346 PHRHSVPYSDRGKVPVEPLLSTQWFVKAEPLAARCREALDQAKPQFVPE-RWSKVYRDWL 404

Query: 202 SGLKDLSLSRKTFDWGIKIP---------------------------------------- 221
           + ++D  +SR+   WG +IP                                        
Sbjct: 405 TDIRDWCISRQ-LWWGHRIPAWFVISESDGRYTDTTPYVVARNEAEALEKARAQFGAEAQ 463

Query: 222 -DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
            +  +  +  W  +     +T G+ D       +++P  L V G DI+ F    +   A 
Sbjct: 464 IEQDEDALDTWFSSGLWPFSTLGWPDQNAADLQRWYPTSLLVTGFDIIFFWVARMTMMAG 523

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGK 337
             +   P                K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+
Sbjct: 524 AFTGKTPFADVYIHGLVRDENNRKMSKSAGNGIDPLLLIDRYGADALRFALVREVAGAGQ 583

Query: 338 DGFYDKDGLKK-----RVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDES 389
           D   D D           + + AN + N  +R   M L          P P A   +D  
Sbjct: 584 DIRLDYDRKSDTSGTVEASRNFANKLWN-ATRFALMNLGGETPASLGKPDPAALQLADRW 642

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----D 442
           ILS  +RV +E      +  +  A   +         D Y +  K       NP      
Sbjct: 643 ILSRLARVNRETAARYSSYGLGEAAKGLYEFAWNEVCDWYLELSKRRLNPGENPSAEALA 702

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQR 492
              T   V  +V+ +L  +L   +P L+ +++  L  AD+      + +  LD+ 
Sbjct: 703 DQRTARQVLAQVMEELQRMLHPLMPHLSEELWHALTGADDATYLALQSWPELDEA 757



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 19/169 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   + T         H+GHA+   + D + RF R+ G +VL   GTD     +    + 
Sbjct: 45  EPFSLVTPPPNVTGSLHMGHAFNTALIDTIVRFQRMQGKNVLCLPGTDHASIAVQTILEK 104

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++          L  S D      T +       
Sbjct: 105 QLKAEGSSKEELGREGFLERCWAWKGESGGRIVSQLRRLGFSVDWQRERFTLDAGCSQAV 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
              +  + ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 165 IEAFVSLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 213


>gi|148654314|ref|YP_001274519.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566424|gb|ABQ88569.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 73/349 (20%), Positives = 130/349 (37%), Gaps = 38/349 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  E +F R     D  L+        I+P  R  +V       ++D  +SR+   W
Sbjct: 376 VEPLLSEQWFVRARPLADLALAAVREGRTRIVPE-RFEKVFFHWLENIQDWCISRQ-LWW 433

Query: 217 G--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           G  I +   P                        ++  W  +     +T G+ D+     
Sbjct: 434 GHRIPVWYTPDGQMIVPGPDDPDPQGEGLVQDPDVLDTWFSSALWPFSTLGWPDDTP-DM 492

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +F+P  +   G DIL F    +      L+   P              G K+SK+ GNV
Sbjct: 493 RRFYPTSVMETGYDILFFWVARMMMMGCYLTGKTPFHTVYLHGLVRDKDGRKMSKTYGNV 552

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P++VIE+ G DALR+ L    + G+D   + + ++   N   AN   N+    +S + 
Sbjct: 553 VNPLDVIEQHGADALRFMLATSSSPGQDLNLNPERIEAARN--FANKTWNIARFVLSKLD 610

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
                  P P   T +D  ILS   R++ ++   M++     A   +   +     D Y 
Sbjct: 611 AHTPPGDPRPA--TLADRWILSRYHRLVTDVDRLMRSYNFGEAGRSIQEFLWSEFADWYV 668

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  K   ++        +   V    +     LL  F+P +  + +  L
Sbjct: 669 EVAK---VQFEQDALQESTRAVLYTTLEGALRLLHPFMPFVTEETWQYL 714



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    IS        + H+GHA  + I DVL R+HR+ G   L+  GTD  G       
Sbjct: 42  DRPPFVISMPPPNVTGELHMGHAMFVAIEDVLTRWHRMLGDPTLWLPGTDHAGIATQLQV 101

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                T  + ++           L  S D      T +     
Sbjct: 102 ERLLQSEGVTRQQIGREAFLRRTWEWKEKYGGEITRQLRRLGASCDWTRERFTLDPMLSR 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R  +K++ D G IY+G     +S   +   +D EV  
Sbjct: 162 AVRAAFKRLYDDGLIYRGYRMVNWSPNLQTAVSDLEVEY 200


>gi|308807252|ref|XP_003080937.1| tRNA synthetase class I (ISS) [Ostreococcus tauri]
 gi|116059398|emb|CAL55105.1| tRNA synthetase class I (ISS) [Ostreococcus tauri]
          Length = 985

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 99/536 (18%), Positives = 163/536 (30%), Gaps = 70/536 (13%)

Query: 27  EMIIADVLA-------RFHRLDGLD--VLFTTGTD-----------EHGQKIAKAAQNAG 66
           E I+ D          RF +  G    V FT G             E G    K      
Sbjct: 279 ETILGDTAVAVNPDDARFKKFIGRRCVVPFTGGRTVPIIGDSYVDMEFGTGALKITPGHD 338

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
                   +   +  ++ +       +  + T     D  + LW  +  +G   K     
Sbjct: 339 PNDYEIGKRVGLDMINILNKDGTMNANCGKYTGIDRADCRKQLWADMEAEGLAIKAEAYT 398

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               R +      E                     V+  E      R        L+   
Sbjct: 399 NRVPRSQRGGEVIEPIVSEQWFCKMDSMAEPSLKAVETGELTIVPQRFEKIYKSWLTDIR 458

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG------------------------ 217
                          + +V    +DL+ +R+    G                        
Sbjct: 459 DWCISRQLWWGHQIPVWYVHDSAEDLARAREGEGKGTNKRYVVARDDAEAEQKAKAQYGD 518

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
             I    + ++  W  +     +T G+ +        F+PA +   G DIL F    +  
Sbjct: 519 HVILYREEDVLDTWFSSGLWPFSTCGWPNEEAPDMKNFFPASVLETGHDILFFWVARMIM 578

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            ++ ++  LP             +G K+SKSLGNV+DP+ VI E G DALR+ L    A 
Sbjct: 579 MSYGMTGKLPFHTVYLHGLVRDAQGRKMSKSLGNVVDPLGVISEQGCDALRFTLATGTAP 638

Query: 336 GKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSMILKDYDGMIPTPGA---------- 382
           G+D   + + L    N +  N I N    V  S+  I  D    +   GA          
Sbjct: 639 GQDLNLNLERLAS--NRNFTNKIWNAGKFVLYSLEEITHDERVALVDEGAALCADAASIA 696

Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
               ++  I+S  +  +  +  +        A     S   +   D + +  K   L   
Sbjct: 697 KLPLAERWIVSKLNATVDHVTASQDRYDFGEAGRATYSFFYDSIADWFIEGAKS-RLYGG 755

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + D A     VT+ V+ +   LL  FVP +  +++  L    E    Q       P
Sbjct: 756 DADAARVTKAVTLYVLDRTLRLLHPFVPYVTEEVWQALPHRGEALIGQEWPAVQAP 811



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 22/170 (12%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT------ 69
                H+GHA  + + DV+ R  R+ G   L+  GTD  G       +    +       
Sbjct: 103 VTGALHMGHAMFVTLQDVMTRSARMRGRKTLWLPGTDHAGIATQLVVERKLESEGKKRTD 162

Query: 70  --------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
                           +  +  +  + +    D S + F  T ++   ++    +  + +
Sbjct: 163 MTREEFVERVWEWKAEYGGRIQQQIKRLGASCDWSRERF--TLDEGLSESVIEAFISLHE 220

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
           +G IYKG Y   ++ + +   +D EV    +         P++    + Y
Sbjct: 221 RGLIYKGTYMVNWAPKLQTAVSDLEVEYSEEPGTLFYFKYPLEGGGPDDY 270


>gi|315931152|gb|EFV10125.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 377

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 87/253 (34%), Positives = 140/253 (55%), Gaps = 6/253 (2%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +H++GKDILRFHAIYWPAFL+S +LPLPK + +HG+   +GEK+SKS GNV+ P EV++ 
Sbjct: 1   MHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDA 60

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G +A RYFL+RE+  G DG + ++ L  R+NA+L+N  GNL++R + M  K   G I  
Sbjct: 61  YGSEAFRYFLLREVPFGNDGDFSENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNILK 120

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
            G     +   L+     L    E ++N   +R L ++   +S  +      +PW L K 
Sbjct: 121 EGVLKYYNTE-LNQAKEHLNLAVEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKE 179

Query: 440 NP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPG 496
           N  ++A+ ++ +   ++ + ++LL   +PK   K+   L     +  +    LD  L   
Sbjct: 180 NKHEQANALVALCANILAKTSLLLSPTLPKSCEKVALALNFEISSTNYAKMILDNELL-- 237

Query: 497 FMLHKTFDPIFPR 509
                  + +FP+
Sbjct: 238 DFKANPCEALFPK 250


>gi|37522488|ref|NP_925865.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708049|sp|Q7NCQ9|SYV_GLOVI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|35213489|dbj|BAC90860.1| valyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 897

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 83/386 (21%), Positives = 148/386 (38%), Gaps = 51/386 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  Y      P++    + +F  +S    ++L  ++S  +     ER  +V      
Sbjct: 339 HVHNVPYSERGGVPIEPYLSDQWFLDVSGMATRVLEAFDSQNQPAFVPERWGKVYRDWLV 398

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------------DDPQYIM 228
            ++  ++SR+   WG +IP                                     Q ++
Sbjct: 399 RIRPWNISRQ-LWWGHRIPAWFVAGSEGEYVVAHDEAEAFAVARERYGPDVQLQRDQDVL 457

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPL 286
             W  +     TT G+ D  +     F+P  L   G DI+ F    +   A   +  +P 
Sbjct: 458 DTWFSSSLWPFTTLGWPDQTE-DLGVFYPNALMSTGFDIIFFWVARMAMMAGEFTGQIPF 516

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG 345
                +      KG+K+SK+ GN IDPIE++++ G DALRY LVRE+   G+D  +D + 
Sbjct: 517 ETVYINGLVRDEKGQKMSKTKGNGIDPIEMMDKYGTDALRYTLVREVTGAGQDVRFDYNR 576

Query: 346 LK-KRVNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVL 398
              +    D +    N +  +   +L + D + P       PG+ T  D  IL    +  
Sbjct: 577 KTGESGAVDASKRFANKIWNASRFVLMNLDELTPAALGAADPGSLTLEDRWILGRLGQTA 636

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++I E +    +  A   +   + +   D Y +  KP          A  V      V+ 
Sbjct: 637 RQIDELLGRYALGEAARSLYEFIWDDFCDWYVELAKPRLEALETRRGAQQV---LAAVLD 693

Query: 457 QLAILLQAFVPKLANKIFDILFVADE 482
           +   LL  ++P L+ +I+ +L    E
Sbjct: 694 RTLRLLHPWMPHLSEEIWQLLHQPLE 719



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 59/176 (33%), Gaps = 18/176 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    + DV+ R+ R+ G   L+  GTD     +    + 
Sbjct: 37  KPFSLVLPPPNVTGSLHMGHALCFTLPDVVVRYRRMKGFKTLWLPGTDHASIAVHTVLEK 96

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + +++    R     L +S D      T +++ +   
Sbjct: 97  QLRQEGKTRFDLGREAFLERAWAWKERSQDTIRGQLRRLGLSLDWTRESFTLDEKRNRAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             ++  +  KG IY+G Y   +    +   +D EV    +  +      PV   +E
Sbjct: 157 VKVFVDLHRKGLIYRGKYLVNWCPASQTAVSDLEVDDKEEKGHLWQLRYPVADSDE 212


>gi|116329125|ref|YP_798845.1| valyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116121869|gb|ABJ79912.1| Valine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 882

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/356 (22%), Positives = 135/356 (37%), Gaps = 44/356 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    D  +   ++     +P         +    ++D  +SR+   W
Sbjct: 353 IEPYLSTQWFVKIKPLADLAVEAVQTGQVEFIPKMWEKTFFEW-MHNIRDWCISRQ-LWW 410

Query: 217 GIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYLDN 247
           G +IP                              DP  ++  W  +     +T G+ + 
Sbjct: 411 GHRIPAYHCKTCKHVEVSETPVTACPSCNSKEVEPDPD-VLDTWFSSQLWPFSTMGWPEQ 469

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHK-GEKISK 305
               K K++P  + V G DI+ F         +     P   KV  HG +  K G+K SK
Sbjct: 470 TPDLK-KYYPTSVLVTGFDIIFFWVSRMIMMGMKFLKAPPFHKVLIHGLVRDKDGKKFSK 528

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNVIDP+ ++E+ G D+ R+FL   +  GKD  +D+  L         N I N  SR 
Sbjct: 529 SVGNVIDPLVMMEKYGTDSFRFFLAATLPEGKDILFDESRLDG--YRSFCNKIWNS-SRF 585

Query: 366 VSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + M LK+                  D+ ILS  +R L+E  +       +   A +   +
Sbjct: 586 ILMNLKESFVPTGITSEIEKDLEPMDQWILSRFNRCLEEYNKAHSKFHFYEMAAAIYEFI 645

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP    K +P        V  +V+ +   LL  F+P L  ++  
Sbjct: 646 WGDFCDWYIELVKPRAYGKVSPRSTEVAKQVLSDVLIRALGLLHPFMPFLTEEVHS 701



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 22/162 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E   +           HIGHA    I D+L R  R  G   L+  G D  G       
Sbjct: 34  SKESFSMVIPPPNVTGSLHIGHALNHTIQDILIRIERKKGKSTLWLPGMDHAGIATQMVV 93

Query: 63  QNA---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +             T + FV++                + + + +D S + F  T ++  
Sbjct: 94  ERELAKEGKKRTDFTREEFVNRIWEWKDHSGGMITRQQKLLGESVDWSRERF--TLDEGL 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                 ++K + D+G IY+G     +        +D EV   
Sbjct: 152 SKAVFKVFKSLYDEGLIYRGERIINWCPASRTAISDLEVEFR 193


>gi|116330266|ref|YP_799984.1| valyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123955|gb|ABJ75226.1| Valine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 882

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/356 (22%), Positives = 137/356 (38%), Gaps = 44/356 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++    D  +   ++     +P         +++  ++D  +SR+   W
Sbjct: 353 IEPYLSTQWFVKIKPLADLAVEAVQTGQVEFIPKMWEKTFFEWMR-NIRDWCISRQ-LWW 410

Query: 217 GIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYLDN 247
           G +IP                              DP  ++  W  +     +T G+ + 
Sbjct: 411 GHRIPAYHCKTCKHVEVSETPVTACPSCNSKEVEPDPD-VLDTWFSSQLWPFSTMGWPEQ 469

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHK-GEKISK 305
               K K++P  + V G DI+ F         +     P   KV  HG +  K G+K SK
Sbjct: 470 TPDLK-KYYPTSVLVTGFDIIFFWVSRMIMMGMKFLKAPPFHKVLIHGLVRDKDGKKFSK 528

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNVIDP+ ++E+ G D+ R+FL   +  GKD  +D+  L         N I N  SR 
Sbjct: 529 SVGNVIDPLVMMEKYGTDSFRFFLAATLPEGKDILFDESRLDG--YRSFCNKIWNS-SRF 585

Query: 366 VSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + M LK+                  D+ ILS  +R L+E  +       +   A +   +
Sbjct: 586 ILMNLKESFVPTGITSEIEKDLEPMDQWILSRFNRCLEEYNKAHSKFHFYEMAAAIYEFI 645

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP    K +P        V  +V+ +   LL  F+P L  ++  
Sbjct: 646 WGDFCDWYIELVKPRAYGKVSPRSTEVAKQVLSDVLIRALGLLHPFMPFLTEEVHS 701



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 22/162 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E   +           HIGHA    I D+L R  R  G   L+  G D  G       
Sbjct: 34  SKESFSMVIPPPNVTGSLHIGHALNHTIQDILIRIERKKGKSTLWLPGMDHAGIATQMVV 93

Query: 63  QNA---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +             T + FV++                + + + +D S + F  T ++  
Sbjct: 94  ERELAKEGKKRTDFTREEFVNRIWEWKDHSGGMITRQQKLLGESVDWSRERF--TLDEGL 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                 ++K + D+G IY+G     +        +D EV   
Sbjct: 152 SKAVFKVFKSLYDEGLIYRGERIINWCPASRTAISDLEVEFR 193


>gi|283852443|ref|ZP_06369712.1| valyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283572181|gb|EFC20172.1| valyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 889

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 143/386 (37%), Gaps = 42/386 (10%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              DD      +          ++    + +F +            E     ILP +   
Sbjct: 333 MLLDDIRDYEHNVGECYRCRTVIEPYVSKQWFVKTGPLAKVARQAVEDGRTTILPDQWTK 392

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIP-----------------------------DDPQ 225
               ++   ++D  +SR+   WG +IP                              DP 
Sbjct: 393 TYYDWLD-NIRDWCVSRQ-IWWGHRIPAWTCDACGELIVSREDPTTCPACGGSALTRDPD 450

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
            ++  W  +     +T G+ D     KA F+P  + V   DIL F         L     
Sbjct: 451 -VLDTWFSSALWPFSTLGWPDETKELKA-FYPTSVLVTAFDILFFWVARMMMMGLHFRHE 508

Query: 286 LP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +P K+V+ H  +   +G+K+SKSLGNVIDP+ ++E  G DALR+ L    A G+D    +
Sbjct: 509 VPFKQVYIHALVRDAEGKKMSKSLGNVIDPLIMMERYGTDALRFTLAAFAAMGRDIKLSE 568

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIR 402
           D ++        N + N    ++  +      M     A      + ILS   R+ Q + 
Sbjct: 569 DRIEG--YRHFVNKLWNAARFALMHVSGGAPEMELAEAAKAGLGHAMILSRLERLKQTVG 626

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +++   + A  ++         D Y +  K  +L   +  +      V + V+  +  
Sbjct: 627 AAIESYQFNEAAQELYGFFWREFCDWYLEMAKV-DLGGEDEAKKGAAKRVLLTVLSDVLT 685

Query: 461 LLQAFVPKLANKIFDIL-FVADENRC 485
           L+  F+P +  +I+  L  VA+ N  
Sbjct: 686 LMHPFMPFVTQEIWSKLPGVAEPNLA 711



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 22/178 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           E   I           H+GHA  + I D+L R+HR  G +VL+  GTD  G         
Sbjct: 38  EPYSIVIPPPNVTGALHMGHALNVTIQDILCRYHRQRGRNVLWVPGTDHAGIATQNVVER 97

Query: 61  ---------------AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                          A         + +  +     R +   +D + + F  T ++    
Sbjct: 98  SLAAEGVSREELGREAFVERVWKWREEYGGKILNQIRCLGASVDWTRERF--TFDEGLSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R ++ ++ D+G IY+G Y   +  R      D EV              PV+  ++
Sbjct: 156 AVREVFVRLYDEGLIYRGDYIINWCPRCHTALADLEVEYAPHIGKLYHIRYPVEGTDQ 213


>gi|85707659|ref|ZP_01038725.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689193|gb|EAQ29196.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 917

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 131/354 (37%), Gaps = 39/354 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           ++    + ++   +   +K +         I+P        ++++  ++   +SR+ +  
Sbjct: 386 IEPWLTDQWYVDAAKLAEKPIEQVRDGTIEIVPKSWEKTFFNWME-NIQPWCVSRQLWWG 444

Query: 216 -----W----------------------GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
                W                      G+++  DP  ++  W  +      T G+ +  
Sbjct: 445 HRIPAWFDADGNVFVAESEDAAQAEAGEGVELTQDPD-VLDTWFSSALWPFATLGWPEEN 503

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                K +P  L + G DIL F    +           P P+           G K+SKS
Sbjct: 504 APLLDKHFPNSLLISGFDILFFWDARMMMMGQYNMGEAPWPRLYLHGLVRAADGSKMSKS 563

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I++ G DALR+F+    + G+D   D+  ++     + A  + N  +R  
Sbjct: 564 KGNVVDPLGLIDQFGADALRFFMAAMESQGRDIKMDEKRVEG--YRNFATKLWN-ATRFC 620

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
                     +  P A   +++ I+       +EI   M +     A   +         
Sbjct: 621 QSNGIGASTTLKAPTARLAANQWIIGEVQAACEEIEAAMADLRFDAAANAIYQFTWSKFC 680

Query: 425 DRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           D Y +  KP   + ++PD   A     V    + Q+ ++L  F+P +  +++  
Sbjct: 681 DWYLELIKPVFAEGSDPDAMPAKETREVAGWALDQILVMLHPFMPFITEELWHA 734



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I           HIGHA +  + D++ R+ RL G D L+  GTD  G       
Sbjct: 34  DAEPFTIVNPPPNVTGSLHIGHALDNTLQDIVIRYERLRGKDALWVVGTDHAGIATQMVV 93

Query: 63  QNAG----------------VTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        +  ++     +    L  S D      T ++    
Sbjct: 94  ERQMEERQDKRTNYSREGFVEKVWEWKHESGGTITNQLRRLGCSMDWSREQFTMDEHFTK 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  +   G IY+      +  + +   +D EV +     ++     P+
Sbjct: 154 AVLKTFVDLYQDGLIYRDKRLVNWDPKLKTAISDLEVEQQTIAGHFWHFKYPL 206


>gi|409360|gb|AAA57558.1| valyl-tRNA synthetase [Lactobacillus casei]
          Length = 901

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 10/321 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +   F    ++   L + E+  ++++  +      I    +     +         I+  
Sbjct: 403 KKVTFVPERFEHTYLQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEAPKDIENW 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +T G+ +       +++P D  V G DI+ F    + +    
Sbjct: 463 KQDPDVLDTWFSSALWPFSTMGWPNTDAPDYKRYYPTDTLVTGYDIIPFWVARMIFQGLH 522

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P    +        +G K+SKSLGN IDP++VIE+ G DALR+FL+     G+D 
Sbjct: 523 FTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADALRWFLITGNKPGQDT 582

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
            +    ++   N    N I N +SR V M L D D    P P  F  SD+ + +  +  +
Sbjct: 583 RFSYKQVEAAWN--FINKIWN-ISRFVMMNLGDLDTPQQPDPSTFDLSDKWLFAQLNETI 639

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ +             + +       D Y +  K   L   +    +         + 
Sbjct: 640 KQVMDLSARFEFGEMGRTLYNFTWNVLADWYVEMSK-EVLYGDDEQAKAAKRVNLAYALD 698

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q+  LL   +P +  K++  L
Sbjct: 699 QILRLLHPVMPFVHGKLWLAL 719



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I         + H+GHA++  + D++ R  R++G D L+  G D  G      
Sbjct: 56  KKAKPYSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAK 115

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+ ++        + +S D      T +K  +
Sbjct: 116 VEAKLRKEGISRYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLN 175

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++  + ++G IY+G Y   +  +     +D EV    D
Sbjct: 176 QAVRRVFVDLYNQGLIYRGEYIVNWDPQARTALSDIEVIHKDD 218


>gi|108757924|ref|YP_632631.1| valyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461804|gb|ABF86989.1| valyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 1306

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 105/290 (36%), Gaps = 32/290 (11%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
           G     DP  ++  W  +     +T G+  N       F+P  +   G DI+ F    + 
Sbjct: 470 GATFIQDPD-VLDTWFSSALWPFSTLGWPRNTP-ELQTFYPTSVMETGHDIIFFWVARMM 527

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV------------------ 316
                   ++P             KGEK+SK+  NVIDP++V                  
Sbjct: 528 MMGLHFMGDVPFRTVYLHAMVRDEKGEKMSKTKKNVIDPLDVILGAPADKLEPTLRNKFP 587

Query: 317 --IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY- 373
             +   G DALR+ L      G+D     D +         N + N  SR   M + ++ 
Sbjct: 588 QGMPAFGADALRFTLASLTQQGRDIKLSMDRMAG--YKAFCNKLWN-ASRFALMNMGEFT 644

Query: 374 -DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
            D         T +D  ILS   R   E R +++      A + +   +     D Y + 
Sbjct: 645 LDERPLKERPLTLADRWILSRLQRATTEARASLETYGFAEAASTLYQFLWAEFCDWYIEL 704

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            K   L  T+     +   V V  + ++  LL  F+P +  +I+  L ++
Sbjct: 705 AK-GSLYGTDEQAKDSARAVLVYSLDRILRLLHPFMPFITEEIWQKLPMS 753



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    +           HIGHA    I D+L R+ R+ G + L+  GTD  G      
Sbjct: 36  SDKPPFSMVLPPPNVTGSLHIGHALTATIQDILIRWKRMSGFNALWLPGTDHAGIATQMV 95

Query: 62  AQNAGVTTK---------------------VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T+                      F  +     R +   LD S + F  T ++
Sbjct: 96  VERELKQTEGKSRHDLGREAFLERVWEWKGKFGARIGEQHRYLGASLDWSRERF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +     R ++ ++ ++G +Y+      +        +D EV              PV
Sbjct: 154 QSSAAVREVFVRLYEEGLMYRAQKLINWCPSCHTALSDLEVEHQEKNGSIWHIRYPV 210


>gi|22299046|ref|NP_682293.1| valyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81742953|sp|Q8DIS8|SYV_THEEB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22295228|dbj|BAC09055.1| valyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 913

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 135/386 (34%), Gaps = 58/386 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F ++    D  L   +         +R  +V       L+D  +SR+   
Sbjct: 354 PIEPLLSTQWFVKIRPLADAALKALDRQHSPRFIPDRWAKVYRDWLVNLRDWCISRQ-LW 412

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                            Q ++  W  +
Sbjct: 413 WGHQIPAWYVVSETNGEVRDDTPFVVAMDETAARAKAIAQFGEDIELQQDQDVLDTWFSS 472

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D+      +++P    V G DI+ F    +       +  +P       
Sbjct: 473 GLWPFSTLGWPDDTP-DYRRYYPNTTLVTGFDIIFFWVARMTMMGQYFTGKIPFRDVYIH 531

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI-ACGKDGFY-----DKDGL 346
                   +K+SKS  N IDP+ +IE+ G DALRY LV+E+   G+D          +  
Sbjct: 532 GLVRDENNKKMSKSANNGIDPLILIEKYGTDALRYSLVKEVVGAGQDIRLAYNRKTDESA 591

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRE 403
                 + AN + N  SR V + L+         P     T SD  ILS     +Q  RE
Sbjct: 592 TVEAARNFANKLWN-ASRFVLLNLEGQTPGQLGTPRRQDLTASDRWILSRYHTAIQTTRE 650

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +++  +  A   +   +     D Y +  KP  L+  N     T   V   V+     L
Sbjct: 651 RIESYGLGEAAKGLYEFIWGDFCDWYIELVKP-RLQGENAKAKRTAQQVLATVLDGTLKL 709

Query: 462 LQAFVPKLANKIFDILFVADENRCFQ 487
           L  F+P +  +I+  L    +N    
Sbjct: 710 LHPFMPHITEEIWHTLHQVADNEVLA 735



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           +   I           H+GHA+E  + DVL R+HR+ G +VL+  GTD     ++     
Sbjct: 39  KPYCIVIPPPNVTGSLHMGHAFEHALIDVLIRYHRMIGRNVLWLPGTDHASIAVSTILDQ 98

Query: 61  ----------AAQNAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                     A        + +  +           R +   +D S + F  T ++    
Sbjct: 99  QLQAEGTNRFALGREAYLKRAWAWKESSGKTIVGQIRRLGLSVDWSRERF--TMDEGLSR 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + ++ + G IY+G Y   +    ++  +D EV       +      P+
Sbjct: 157 AVLTAFNRLYEAGLIYRGQYLVNWCPASQSAVSDLEVENREVQGHLWYLRYPL 209


>gi|313897678|ref|ZP_07831220.1| valine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957630|gb|EFR39256.1| valine--tRNA ligase [Clostridium sp. HGF2]
          Length = 874

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 72/361 (19%), Positives = 137/361 (37%), Gaps = 33/361 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYY-ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F R+    +++L        +     +R  +        ++D  +SR+   
Sbjct: 352 VEPYLSKQWFVRMEPLAEEVLKNQEIEEQKIHFYPQRFEKTFHQWLENIEDWCISRQ-LW 410

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+    D   
Sbjct: 411 WGHRIPAWYHKETGEIYVGMEDPQDLENWIQDEDVLDTWFSSALWPFSTLGWPKETD-DL 469

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +       N P    +        +G K+SKSLGN 
Sbjct: 470 NRYFPNDVLVTGYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVRDAQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI + GVDALR+FL      G+D  Y  + ++   N    N I N     +  I 
Sbjct: 530 IDPMDVIADHGVDALRFFLTTNSTPGQDLRYIDEKVEASAN--FINKIWNASRFVLMQIP 587

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +D +         +  D+ IL   + VL+ +  NM+         ++ S + +     Y 
Sbjct: 588 EDMEVSDIDLSNASMIDKWILKRFNEVLENVTANMEKYEYALVGNELYSFIWDDFCSWYI 647

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +           V V+  +  +L  F+P +  +I+  +    E+   ++
Sbjct: 648 ELSKA-GLSSDDETLRRATQSTLVTVLSGIVRMLHPFMPFVTEEIYLAIPHTQESINLEA 706

Query: 489 L 489
            
Sbjct: 707 W 707



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D+++R+ R+ G D+L+  G D  G      
Sbjct: 33  KSKDPFCIVIPPPNVTGKLHLGHAWDTTLQDIVSRYKRMQGYDMLWLPGMDHAGIATQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                 +                   + ++ +   R     + +S D      T ++   
Sbjct: 93  VDERLKSEGISRYDIGREKFLERAWEWKEEYASTIRKQWAKMGLSLDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           D  R ++  + + G IY+G     W      A  N + ++K  +G  Y  ++  V+  +E
Sbjct: 153 DAVRRVFVDLYNDGLIYQGERIINWDPQAKTALSNIEVIHKEIEGAMYYFKYKVVETGKE 212


>gi|115376535|ref|ZP_01463768.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822062|ref|YP_003954420.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115366468|gb|EAU65470.1| valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395134|gb|ADO72593.1| Valyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 1176

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 123/372 (33%), Gaps = 38/372 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISF 199
           V +     Y+    N   W      ++          +       +  LP +     +  
Sbjct: 388 VPETWTNTYFQWMRNIHDWCISRQLWWGHQVPAYYCNACSPRVGDDTDLPEDAPTVRVGG 447

Query: 200 VKSGLKDLSLSRKTFDW-----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           +        ++R+         G     DP  ++  W  +     +T G+ +     K  
Sbjct: 448 IDYARATPIVARQQPTACPQCAGHAFTQDPD-VLDTWFSSALWPFSTLGWPEKTPELKT- 505

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F+P  +   G DI+ F    +         ++P             KGEK+SK+ GNVID
Sbjct: 506 FYPTSVMETGHDIIFFWVARMMMMGLHFMGDVPFRTVYLHAMVRDEKGEKMSKTKGNVID 565

Query: 313 PIEVIEE--------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           P+++I                       G DALR+ L      G+D     + +      
Sbjct: 566 PLDIIHGATLETLSPTLRNKFPQGMPAFGADALRFTLASLTQQGRDIRLSMERV--GGYK 623

Query: 353 DLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
              N + N  SR   M L  +  D         T +D  IL+   R + + R+ ++    
Sbjct: 624 AFCNKLWN-ASRFALMNLGGFQLDTRPIKQRELTLADRWILARLQRAIVDTRQALEAFAF 682

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A + +   +     D Y +  K   L   +     +   V +  + ++  LL   +P 
Sbjct: 683 SEAASTLYQFLWSEFCDWYIELSK-GALYGDDERAKDSTRAVLIFCLDRILRLLHPIMPF 741

Query: 469 LANKIFDILFVA 480
           +  +I+  L + 
Sbjct: 742 ITEEIWQKLPLP 753



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    I D+L R+ R+ G + L+  G D  G      
Sbjct: 36  SDKPPFSIVLPPTNVTGSLHLGHALTATIEDILIRWKRMSGYNALWMPGIDHAGIATQMV 95

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
                             Q        + D+  R   D    L  S  +D    T +++ 
Sbjct: 96  VEKELKKTEKKSRHDLGRQEFLKRVWQWKDKYGRRIGDQHKFLGASLDWDRERFTMDEKS 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++ ++ ++G IY+      +        +D EV              PV
Sbjct: 156 SAAVREVFVRLHEEGLIYRAQKLINWCPSCHTALSDLEVEHEEKKGSIWHIRYPV 210


>gi|134097970|ref|YP_001103631.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008560|ref|ZP_06566533.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910593|emb|CAM00706.1| valyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 877

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 127/355 (35%), Gaps = 37/355 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++                 + P E   +        L D ++SR+   
Sbjct: 358 PIEPRLSLQWYVKVGPLAKAAGDAVRDGRVEVHPPE-MAKRYFDWVDNLHDWNISRQ-LW 415

Query: 216 WGIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           WG +I                            + ++  W  +     +T G+ D+    
Sbjct: 416 WGHRIPVWYGPGGEVVCVGPDEEPPSGEGWHQDEDVLDTWFSSGLWPFSTMGWPDDTADL 475

Query: 252 KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLG 308
           + K++P  + V G DIL F    +           P  + +  HG +    G+K+SKS G
Sbjct: 476 R-KYYPTSVLVTGYDILFFWVARMMMMGLYAMDGEPPFRVIALHGMVRDPHGKKMSKSAG 534

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +DP+E ++  G DALR+ L R    G D    ++ +           + N  ++   M
Sbjct: 535 NTVDPLEWMDNYGTDALRFTLARGANPGADSPISEEWVAGS--RSFCTKLFN-ATKFAMM 591

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                   +P     T++D  IL    RV+ E+ E +++    +A   +     +   D 
Sbjct: 592 NGARVPAALPPRDELTDADRWILDRADRVVSEVDELLEDFQFAKATEALYHFTWDEFCDW 651

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           Y +  K         DRA     V   V+  L  LL   +P +   ++  L   D
Sbjct: 652 YLELSK--VQLDEQGDRAERTRDVLGHVLDVLLRLLHPTIPYITETLWTTLTGRD 704



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I           HIGHA+E  + DVL R  R+ G D L+  G D     +    
Sbjct: 42  DKPPFSIVIPPPNVTGSLHIGHAFEHTLMDVLTRRRRMQGYDALWLPGMDHASIAVQAMV 101

Query: 63  QNAGVTT----------------KVFVDQNS----RNFRDMADVLDISYDDFIRTTEKRH 102
           +                        + +++        R + D +D + + F  T +   
Sbjct: 102 EKQLRDEGIDHRELGREGFLARVWEWKEKHGGAILSQMRRLGDSVDWTRERF--TMDDGL 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++KK+ D G IY+      +S    +  +D EV  
Sbjct: 160 SRAVQTIFKKLYDDGLIYRAERLVNWSPEMRSAISDIEVEH 200


>gi|229085157|ref|ZP_04217404.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228698138|gb|EEL50876.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 1035

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 155/409 (37%), Gaps = 34/409 (8%)

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
              R    +      S+  FIRTTE         + +      D            R   
Sbjct: 386 HCWRCDSPLLYYAGESW--FIRTTE---------IKETFLKNNDEVTWYPDHMKHGRFGK 434

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +    E     +         P+   E E        +  K +     H      + R  
Sbjct: 435 FL---ENMVDWNISRKRYWGTPLNVWECESC---DHQFAPKSIEGLRKHS-----VGRVA 483

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   K  + ++ +  +    G  +    + ++ VW D+ +       Y         +
Sbjct: 484 ENLELHKPYVDEVKVCCEK--CGSSMNRTLE-VIDVWFDSGSMPFAQYHYPFENKELFEE 540

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PAD+   G D     F+++   + L +  +P  + +     +  +G+K+SKS GN +D
Sbjct: 541 QFPADVIAEGVDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEQGQKMSKSKGNALD 600

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILK 371
           P+E++E+ G DALR+ L+ + A      +  +   +   + L + + N+ S   +   L 
Sbjct: 601 PVELVEKFGADALRWALLVDSAPWNAKRFS-ERTVQEAKSKLVDTLVNVYSFYVLYANLD 659

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF-- 428
            YD         T+ DE +LS      +++R  +++     A  ++ +LV E+ + Y   
Sbjct: 660 GYDPKGKYEVKRTKLDEWVLSRLHSTTKKVRTALEDYQFTNAAREIAALVDELSNWYVRR 719

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + WE    NP++A+       EV+  ++ LL  F P +A  I   L
Sbjct: 720 SRNRFWE-SGMNPEKAAA-YETLHEVLVTVSKLLAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  D+   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDNPYVTLQNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|269837640|ref|YP_003319868.1| valyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786903|gb|ACZ39046.1| valyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 894

 Score =  176 bits (447), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 138/408 (33%), Gaps = 49/408 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++E Y    E +  + G   +     V+ +    ++ R+       +          +P 
Sbjct: 333 QEEGYLVRVEEHAHSVGH-CDRCDTVVEPIISLQWWLRMEPLAKPAIQVARDETVRFIPE 391

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------------------------ 220
            R   +       + D  LSR+   WG +I                              
Sbjct: 392 -RFKGIYLHWMENVHDWCLSRQ-LWWGHRIPVWYCDACGEVTVTAEESIDRCEHCGSTDI 449

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             DP  ++  W  +     +T G+ D+ +  +  F+P  +   G DI+      + +   
Sbjct: 450 HQDPD-VLDTWFSSGLWPFSTLGWPDDTEDLR-YFYPGTVMETGYDIIFLWVARMIFLGL 507

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                +P     F        G+++SK+ GNV+DP E+    G DALR+ L+   A G D
Sbjct: 508 EFMGEVPFTHVYFHGTVRDEAGQRMSKTKGNVLDPTEITARYGSDALRFALITAGAPGAD 567

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-------DYDGMIPTPGAFTESDESIL 391
                  ++   N   AN I N     +  I         D   + P       +D  +L
Sbjct: 568 LKLSVQRVEAARN--FANKIWNATRYVLRAIDGHEIATGPDGAPLRPQAEHLGLADRWML 625

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           S    V  E+ + +    +  A  ++   +     D Y ++ KP  L+  +    +    
Sbjct: 626 SRLEAVTAEVTDLLHAFQLGEAGRRLYEFLWSEYCDWYIESSKP-VLQGNDAVAKAATRQ 684

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             V V+ +   LL   +P +  +++  L  A ++       +      
Sbjct: 685 TLVYVLERSLRLLHPIMPFVTEELWQHLPHAGDSIMVAPWPEADTAAI 732



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
            R+   I         + H+GHA  + + D+L R+HR+ G   L+  G D  G      +
Sbjct: 40  GRKPFVIIMPPPNVTGELHMGHALFVTVEDILTRWHRMLGEPTLWLPGADHAGIAGQWVV 99

Query: 59  AKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            K     G++               ++D+     R+   +L  S D   F  T +     
Sbjct: 100 EKEIAKEGLSRHDLGREKFLERVWDWMDRYRGRIREQLRILGASCDWTRFRFTMDPGPSR 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R  +K + DKG IY+G     +  R     +D EV       +      P++  ++
Sbjct: 160 AVRTAFKHLYDKGLIYRGERMINWCPRCMTALSDLEVNHVEIQSHIWTIRYPIEGTDQ 217


>gi|225848404|ref|YP_002728567.1| valyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644293|gb|ACN99343.1| valyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 973

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 9/273 (3%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
             G +     + ++  W  +      T G+       K  F+P  L + G DI+ F    
Sbjct: 530 KCGSENLHQDEDVLDTWFSSGLWPFGTLGWPVETQDLKT-FYPTSLLITGFDIIFFWVAR 588

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +       + N+P             KGEK+SK+ GNVIDP+E+ E+ G DALR+ L   
Sbjct: 589 MIMMGTKFTDNIPFHDVYIHALVRDEKGEKMSKTKGNVIDPLEMAEKYGADALRFTLTAL 648

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D    +  ++       +N I N  S+ V    ++ +         +  D+ IL+
Sbjct: 649 AAQGRDIRLSEKRIEG--YKHFSNKIWN-ASKFVLTNSQNIEVKDVKQLNLSTEDKWILT 705

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
              + +++    ++N   +     +         D Y +  K   + K + +   T + V
Sbjct: 706 ALMKTVKKSSNELENYRYNEYANTIYDFFWHDYCDWYIEFTK-ERIYKGSQEEKQTAVSV 764

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              V+R+   LL   +P +  +I+  L + + +
Sbjct: 765 LNFVLRESLKLLHPIMPFITEEIYQYLPIKETD 797



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K  EK Y    +  PN     HIGHA    + D++ R+ R+ G + L+  G D  G    
Sbjct: 27  KTGEKPYFCVVLPPPNVTGSLHIGHALNATLQDIIVRYKRMKGFNTLWLPGFDHAGIATQ 86

Query: 60  ----------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTE 99
                              +N       +V ++  + ++    L  S D     F  T +
Sbjct: 87  WVVVRELQKQGISRFDLGRENFIKKVWEWVPKSRDSIKNQLIRLGASCDWSRQRF--TLD 144

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +    + R  + ++  +G I+K  Y   +  ++    +D EV    +         P++
Sbjct: 145 EGFSRSVREAFVRLYKEGLIFKAPYIVNWDPKERTAISDLEVEYYEEKGKLWHIKYPLE 203


>gi|94269042|ref|ZP_01291356.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451369|gb|EAT02231.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 889

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 135/370 (36%), Gaps = 51/370 (13%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+      +F  +     +  +   +    +LP    N    +++  ++D  
Sbjct: 347 HCYRCQTVVEPSLSPQWFVAVKPLAQRATAAVRAGEIQLLPKMWHNTFYDWME-NIRDWC 405

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                                 ++  W  +     +
Sbjct: 406 ISRQ-IWWGHRIPAWSCQACGELVVAEESPDLCPACGSANLSRESDVLDTWFSSALWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-- 298
           T G+ +     K  F+P  + +   DIL F    W A ++   L    +V      LH  
Sbjct: 465 TLGWPEQTRELK-MFYPTSVLITSFDILFF----WVARMMMMGLHFMDEVPFRHVYLHAL 519

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS GNV+DP+E+++  G DALR+ +    A G++    ++ ++       
Sbjct: 520 VRDKHGQKMSKSKGNVLDPLELMDRYGTDALRFTMAAFAAQGREIKLAEERIEG--YRHF 577

Query: 355 ANGIGNLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N + N    ++  +  +      + +       +  D  ILS  SRV   +   + +  
Sbjct: 578 INKLWNAARFTLMQLDDEGRSATEEALASDSATLSLPDRWILSRSSRVAAAVGGALDDFR 637

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A +     V     D Y +  KP EL    P        V + V+  +  +L   +P
Sbjct: 638 FNDAASAAYQFVWKEFCDWYLEWIKP-ELYGDEPAARERSRRVLLTVLEDILKMLHPMIP 696

Query: 468 KLANKIFDIL 477
            +  +I+  L
Sbjct: 697 FVTEEIWHAL 706



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 36  EDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAGIATQNV 95

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++     +    L  S  +D    T +    
Sbjct: 96  VERQLADQGQSRHKLGREQFIERVWQWKEESGGQIINQLKRLGCSCDWDRERFTLDAGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++  +G IYKG Y   +  R      D EV     
Sbjct: 156 AAVKKVFVQLYREGLIYKGNYIINWCPRCLTALADIEVEHEEC 198


>gi|21229069|ref|NP_634991.1| isoleucyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74522709|sp|Q8PSV9|SYI_METMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20907621|gb|AAM32663.1| Isoleucyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 1058

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 151/407 (37%), Gaps = 68/407 (16%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ ++  E +F +++  ++K+L   +       P    +        G +D  
Sbjct: 396 HCWRCKTPIIYLATEQWFLKVTEIKEKMLEEID--AVDWYPDWAGSARFRTWVEGARDWC 453

Query: 209 LSRKTFDWGIKIPDDP-------------------------------------------- 224
           +SR+   WGI IP                                               
Sbjct: 454 ISRQR-YWGIPIPVWKCKKCGKLEVIGTKAELLEKAGLNGDIELHRPYVDRVTVPCECGG 512

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                + +  VW D+      T  +    D    ++WPAD    G D     F++    +
Sbjct: 513 EKKRVEDVFDVWFDSAVASWATLKFPQTRDQ-FDEWWPADFITEGHDQTRGWFYSQLGAS 571

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +     P    +     +   G+K+SKSLGNVI P+++I   G D LR +++   A   
Sbjct: 572 MVGFGRAPYKSVLMHGFTLDAGGKKMSKSLGNVISPLDIIGRFGADTLRAYVLSSSAPWD 631

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT----PGAFTESDESILS 392
           D  ++ + ++    +   N + N+    +  M L ++D M  +      A  E D  ILS
Sbjct: 632 DLKFNLEEVETIHRS--INILWNVFRFPLPYMALDNFDPMQVSLDSVRDALREEDRWILS 689

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVL 448
               V++ + E M   L+H+A+ +++          Y    +P  W     +PD+ +   
Sbjct: 690 RAQSVVKSVDEAMSGYLLHKAVREILDFTLEDLSRWYIQLIRPRTWTEA-DDPDKLAA-Y 747

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            V  EV   +  L+  F+P LA +++  L    + +  +S+     P
Sbjct: 748 CVLYEVYVTITKLISPFMPYLAEEMYQNLIRNVDPKAPESVHMCDWP 794



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++L+      Y     H+G A+  II D + R++ ++   +L   G D HG  I   
Sbjct: 36  KSGKRLFFVDGPPYTTGHIHLGTAWNKIIKDSILRYYSMNNRYILERPGWDMHGLPIEVK 95

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
                             +N     K F  +  +   +    L +   + D   T +  +
Sbjct: 96  VEGVLGFKSKKDIESFGVENFIEKCKEFAIKQKQAMTEQFQRLGVWLQWPDPYMTLKDEY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      K+ S+K  +  G  S  +  R E    D EV  
Sbjct: 156 IEAAWWTLKQASEKDLLEVGKRSVNWCPRCETAIADSEVEY 196


>gi|330837436|ref|YP_004412077.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329749339|gb|AEC02695.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 884

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 138/368 (37%), Gaps = 39/368 (10%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +  +    +  ++    + +F R+    DK L  ++       P    N   S   
Sbjct: 339 PYVHEVGHCYRCNTIIEPYLSDQWFVRMRGMADKALKAWKDGEVTFYPRRWENT-YSSWL 397

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
             ++D  +SR+   WG  I +                                ++  W  
Sbjct: 398 ENIRDWCISRQ-LWWGHRIPVWYCEDCGEMIVSRNDVTVCPKCGSSHLRQEEDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ ++    K +F+P    + G DI+ F    +   +   +  +P      
Sbjct: 457 SWLWPFSTLGWPEDTPDLK-EFFPTQTLITGYDIIFFWVSRMIMASLEFTGKVPFKDVYL 515

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G K+SKSLGN IDP+EV++  G DA+++ L       +D   D    K  + 
Sbjct: 516 TGLVRDRQGRKMSKSLGNGIDPLEVVDLYGADAMKFTLAHLTVQSQDVLIDMGLFK--MG 573

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +  AN I N  SR + M L+    +       +  D+ I +  ++    ++  ++    +
Sbjct: 574 SRFANKIWN-ASRFLLMKLEGRTKVSVPETELSIMDKWIYAELNQAAGRVQSTLEGYRFN 632

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +A K   L+  +P      + + ++++ +   LL  F+P +
Sbjct: 633 EASQTVYDFFWNDFCDWYIEASKH-NLESNDPVVQDRAVSLLLDILEESLRLLYPFLPFI 691

Query: 470 ANKIFDIL 477
             +I+  L
Sbjct: 692 TQEIYSKL 699



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 48/157 (30%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    ++D + R+ R+ G   L+  GTD  G       + 
Sbjct: 37  KPFTIVMPPPNVTGILHMGHALNNSLSDTIIRYQRMSGRKALWVPGTDHAGIATQNVVER 96

Query: 65  AGVTT------------KVFVDQNSRNFR----DMADVLDISYDDFIR--TTEKRHHDTC 106
                                 Q  +          + +  S D      T ++      
Sbjct: 97  QLAKEGLSRHDLGREKFLERTWQVKKKHHSVIVKQLEKIGCSCDWEHERFTMDEGLSRAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           R  +  + ++G IYKG Y   Y         DDEV  
Sbjct: 157 REAFVTLYERGLIYKGKYLINYCPHCGTALADDEVEY 193


>gi|303249052|ref|ZP_07335296.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489575|gb|EFL49516.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 889

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 148/406 (36%), Gaps = 51/406 (12%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    DD      +          ++    + +F +            E     ILP +
Sbjct: 331 KEQKLLDDIRDYEHNVGECYRCRTVIEPYVSKQWFVKTGPLAKAAREAVEHGRTAILPDQ 390

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----------------------------D 222
                  ++   ++D  +SR+   WG +IP                              
Sbjct: 391 WTKTYYDWLD-NIRDWCVSRQ-IWWGHRIPAWTCDACGELIVSREDPTACPKCGATTLTR 448

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           DP  ++  W  +     +T G+ D     K  F+P  +     DIL F    W A ++  
Sbjct: 449 DPD-VLDTWFSSALWPFSTLGWPDETKELKT-FYPTTVLSTAFDILFF----WVARMMMM 502

Query: 283 NLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L   K+V      +H      +G K+SKSLGN IDP+ ++++ G DALR+ L    A G
Sbjct: 503 GLHFMKEVPFKEVYIHALVRDAEGRKMSKSLGNGIDPLAMMDQYGTDALRFTLAAFAAMG 562

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCS 395
           +D    ++ ++        N I N    ++  I +    +     A      + ILS   
Sbjct: 563 RDIKLSEERIEG--YRHFVNKIWNAARFALMHIGEGAPDIPLEEAAKAGLCHAVILSRLE 620

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R+ +++   ++    + A  ++         D Y +  K  +L   +  +      V   
Sbjct: 621 RLKEKVAGAIEGYQFNDAAQELYGFFWREFCDWYLEMAKV-DLGGEDAAKKGAAKRVLFT 679

Query: 454 VIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFM 498
           V+ ++  L+  F+P +  +I+  L  VAD N    S     +PG +
Sbjct: 680 VLSEVLTLMHPFMPFVTQEIWSKLPGVADPNLARMSFPGA-RPGLV 724



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           E   I           H+GHA  + I D+L R+HR  G +VL+  GTD  G         
Sbjct: 38  EPYSIVIPPPNVTGALHMGHALNITIQDILCRYHRQRGRNVLWVPGTDHAGIATQNVVER 97

Query: 61  ---------------AAQNAGVTT-KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                          A           +  +     R +   +D + + F  T ++    
Sbjct: 98  SLAAKGVSREAIGREAFIEEVWKWRAEYGGKILNQIRRLGASVDWTRERF--TFDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             R ++ ++ ++G IY+G Y   +  R      D EV              PV+ M
Sbjct: 156 AVREVFVRLYEEGLIYRGDYIINWCPRCHTALADLEVEYAPHIGKLYHIRYPVEEM 211


>gi|114798244|ref|YP_760384.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738418|gb|ABI76543.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 906

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 124/352 (35%), Gaps = 39/352 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +   +      +P        +++   ++   +SR+   W
Sbjct: 378 IEPWLTDQWYVDAHTLAQPAIKAVQDGATRFVPENWSKTYYNWMD-NIQPWCVSRQ-LWW 435

Query: 217 G--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLDNP 248
           G  I    D                             ++  W  +     +T G+ D  
Sbjct: 436 GHRIPAWYDEDGNVFVAATEQEAQAAAGKGKKLVQDEDVLDTWFSSALWPFSTQGWPDET 495

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D  K  F+P    V   DI+ F    +       +  +P          +  KG+K+SKS
Sbjct: 496 DALKT-FYPTATLVTAFDIIFFWVARMMMMGMEFTGQVPFKDVYIHALVLDEKGQKMSKS 554

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+++I E G DALR+ + R    G++    K  ++   N + +  + N V R  
Sbjct: 555 KGNVMDPLDLINEYGADALRFAMSRLAGQGRNIRLSKQVVEG--NRNFSTKLWNAV-RFA 611

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
            M      G I         +  ILS     + ++   ++    + A   +   +     
Sbjct: 612 EMNECGAPGPIDPSTIERPVNRWILSELDACVADVTRGLEEYRFNEAAGALYRFIWNTLC 671

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           D Y +  KP  L   +    S    V   VI +   LL  F+P +  ++++ 
Sbjct: 672 DWYLELIKP-LLAGMDDGAKSETRMVCGYVIDEALKLLHPFMPFVTEELWER 722



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 53/172 (30%), Gaps = 23/172 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             I           H+GHA    + DVL RF R+ G +VL+  GTD  G           
Sbjct: 36  YSIVIPPPNVTGVLHMGHALNNTLQDVLIRFERMRGKNVLWQPGTDHAGIATQMVVERQL 95

Query: 60  -------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                        +A        K           + +    D S + F  T ++     
Sbjct: 96  AQEGNTDRRSMGREAFVERVWKWKEESGGAIVGQLKRLGASCDWSVERF--TMDEGLSKA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              ++  +  K  +Y+      +    +   +D EV +     +Y     P+
Sbjct: 154 VTKVFVDLYRKKLLYRDKRLVNWDPHFQTAISDLEVEQKEVDGHYWHLRYPL 205


>gi|20091262|ref|NP_617337.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74530882|sp|Q8TN62|SYI_METAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19916383|gb|AAM05817.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 1058

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 153/407 (37%), Gaps = 68/407 (16%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ ++  E +F +++  ++K+L   +       P    +        G +D  
Sbjct: 396 HCWRCKTPIIYLATEQWFLKITEIKEKMLEEID--AVDWYPDWAGSARFRTWVEGARDWC 453

Query: 209 LSRKTFDWGIKIPDDP-------------------------------------------- 224
           +SR+   WGI +P                                               
Sbjct: 454 ISRQR-YWGIPLPVWKCKKCGKLEVIGTKAELLEKAGLSGDIELHRPYVDRVTVPCECGG 512

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                + +  VW D+      T  +    D    ++WPAD    G D     F++    +
Sbjct: 513 EKKRVEDVFDVWFDSAVASWATLKFPQTHDQ-FDEWWPADFVTEGHDQTRGWFYSQLGAS 571

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +     P    +     +   G+K+SKSLGNV+ P+++I+ +G D LR +++   A  +
Sbjct: 572 MVGFGRAPYKSVLMHGFTLDAGGKKMSKSLGNVVSPLDIIDRLGADTLRAYVLSSSAPWE 631

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT----PGAFTESDESILS 392
           D  Y+ + ++    +   N + N+    +  M L ++D M  +      A  E D  ILS
Sbjct: 632 DLKYNLEEVETVHRS--INILWNVFRFPLPYMALDNFDPMQVSLDSVKDALREEDRWILS 689

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVL 448
               V++ + E M   L+H+A+ +++          Y    +P  W     +PD+ +   
Sbjct: 690 RAQSVIKAVNEAMSGYLLHKAVREILEFALEDLSRWYIQLIRPRTWTEA-DDPDKLAA-Y 747

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            V  EV   +  L+  F+P LA +++  L    +    +S+     P
Sbjct: 748 CVLYEVYVTITKLISPFMPYLAEEMYQNLIRNVDPNAPESVHMCDWP 794



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++L+      Y     H+G A+  II D + R++ ++   +L   G D HG  I   
Sbjct: 36  KTGKRLFFVDGPPYTTGHIHLGTAWNKIIKDTILRYYSMNNRYILERPGWDMHGLPIEVR 95

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
                             +N     K F     +   +    L +   + +   T +  +
Sbjct: 96  VEGVLGFKSKKDIESFGVENFIEKCKEFAITQKQAMTEQFQRLGVWMQWPEPYMTLKDDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      K+  +K  +  G  S  +  R E    D EV  
Sbjct: 156 IEAAWWTLKQAHEKDLLEVGKRSVNWCPRCETAIADSEVEY 196


>gi|326382834|ref|ZP_08204524.1| valyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198424|gb|EGD55608.1| valyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 891

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 83/419 (19%), Positives = 134/419 (31%), Gaps = 78/419 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++  +                 I P  +     ++V   + D ++SR+   
Sbjct: 365 PIEPRLSMQWWVSVEGLAKAAGDAVRGGDTVIHPKSQEPRWFAWVDD-MHDWTISRQ-LW 422

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 423 WGHRIPIWYGPDGEVECFGPDETAPEGWVQDPDVLDTWFSSGLWPFSTMGWPERTA-ELD 481

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS-------------ANLPLPKKVFSHGFILHKG 300
           KF+P  + V G DIL F       F                A +P              G
Sbjct: 482 KFYPTSVLVTGYDILFFWVARMMMFGTYVGTLDAGGFAGRDARVPFHDVFLHGLVRDDHG 541

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN IDP++ ++  G DALR+ L R    G D    +   +   N   A  + N
Sbjct: 542 RKMSKSKGNGIDPLDWVDRFGADALRFTLARGANPGSDISVGESHAQSSRN--FATKLFN 599

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
               ++       D   P     T +D  ILS    VL ++     +    +A   +   
Sbjct: 600 ATKFALMNGAVVADL--PPRDELTVADRWILSRLDEVLADVDAGFDSYEFSKACEALYHF 657

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +   D Y +  K         +RA     V   V+ +L   LQ  +P +   ++  L 
Sbjct: 658 AWDEVCDWYLELSK--VQVAEGGERADRTAAVLGTVLDKLLRALQPVMPFVTEVLWKALT 715

Query: 479 VAD-------------------------------ENRCFQSLDQRLKPGFMLHKTFDPI 506
             +                               E R F+S DQ LKPG  +  T D +
Sbjct: 716 GGESVVVAPWPTASGAPADTEAAQRVEDLQKLITEVRRFRS-DQGLKPGQRVAATVDGL 773



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    +           H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 45  SDKPAYSVVLPPPNVTGSLHMGHALDHTLMDTLTRRKRMQGYEVLWLPGMDHAGIATQTI 104

Query: 62  AQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
            +                 F+D+  +             R + D +D S D F  T ++ 
Sbjct: 105 VEKQLAAEGTGREELGRDEFIDRVWKWKAESGGTIQGQMRRLGDGVDWSRDRF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D G IY+      +S   +   +D EV  
Sbjct: 163 LSRAVQTIFKRMYDDGLIYRAERLVNWSPAQQTAISDIEVKY 204


>gi|294629342|ref|ZP_06707902.1| valyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292832675|gb|EFF91024.1| valyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 874

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 131/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVREGKVTIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDDEAPTGEGWHQDTDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 472 PERTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     DG +P P A + +D  ILS  + V+ E+     +    +    +    
Sbjct: 588 ATRFALMNGATVDGPLPEPSAMSATDRWILSRLNSVVAEVDAYYDDFQFAKLSDTLFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K     +   + A     V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSK--TTFQAGGEAAEVSQRVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 104

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                               Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELAKEGKSRHDLGREAFVDRVWQWKSESGGQISGQMRRLGDGVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSQAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 207


>gi|145350050|ref|XP_001419436.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579667|gb|ABO97729.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 924

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 137/394 (34%), Gaps = 62/394 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  E +F ++    +  L   E+    I+P +R  ++     + ++D  +SR+   W
Sbjct: 363 IEPIVSEQWFCKMETMAEPSLKAVETGELTIIP-QRFEKIYKSWLTDIRDWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY----------------------------------IMYVWIDALTNYLT 240
           G  I +                                        ++  W  +     +
Sbjct: 421 GHQIPVWYGEGKGTNKRYVVARNDADAAEKAKAQYGENVVLYREEDVLDTWFSSGLWPFS 480

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +        F+PA +   G DIL F    +   ++ ++  LP             
Sbjct: 481 TCGWPNEEAPDMKNFFPASVLETGHDILFFWVARMIMMSYGMTGKLPFHTVFLHGLVRDS 540

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           +G K+SKSLGNV+DP+ VI E G DALR+ L      G+D   + + L    N +  N I
Sbjct: 541 QGRKMSKSLGNVVDPLGVIAEQGCDALRFTLATGTTPGQDLNLNLERLAS--NRNFTNKI 598

Query: 359 GNLVSRSVSMILKDYDGMIPTP--------------GAFTESDESILSVCSRVLQEIREN 404
            N     +  +    D                         ++  I+S  +  +  +   
Sbjct: 599 WNAGKFVLYSMEDMTDDERMALVDEGAALCADEASIAELPLAERWIVSKLNATVDHVTAA 658

Query: 405 MQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
                   A     +    S  D + +  K       + D A     VT+ V+ Q   LL
Sbjct: 659 QDKYDFGEAGRSTYTFFYDSFADWFIEGAKSRT-YGDDADAARVTKAVTLYVLDQTLRLL 717

Query: 463 QAFVPKLANKIFDILFVADEN---RCFQSLDQRL 493
             FVP +  +++  L    E    + + +L+  +
Sbjct: 718 HPFVPYVTEEVWQALPHRGEALIGQDWPALEAYV 751



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 22/163 (13%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT------ 69
                H+GHA  + + DV+ R  R+ G   L+  GTD  G       +    +       
Sbjct: 55  VTGALHMGHAMFVTLQDVMTRSARMRGRKTLWLPGTDHAGIATQLVVERKLESEGVKRTD 114

Query: 70  --------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
                           +  +  +  + +    D S + F  T ++   ++    +  + D
Sbjct: 115 MTRDEFVERVWEWKAEYGGRIQQQIKRLGASCDWSRERF--TLDEGLSESVLEAFITLHD 172

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +G IYKG Y   ++ + +   +D EV    +         PV+
Sbjct: 173 RGLIYKGTYMVNWAPKLQTAVSDLEVEYTEEPGTLYFFKYPVE 215


>gi|54023315|ref|YP_117557.1| valyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81823205|sp|Q5Z048|SYV_NOCFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|54014823|dbj|BAD56193.1| putative valyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 893

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 121/365 (33%), Gaps = 48/365 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++ A          +    I P  +      +V   + D ++SR+   
Sbjct: 365 PIEPRLSMQWWVKVEALAKAAGDAVRNGQVVIHPASQEPRWFEWVD-NMHDWTISRQ-LW 422

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 423 WGHRIPIWYGPDGEVVCLGPGETPPEGWVQDPDVLDTWFSSGLWPFSTMGWPDATP-ELT 481

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSA---------------NLPLPKKVFSHGFILH 298
           KF+P  + V G DIL F       F +                  +P             
Sbjct: 482 KFYPTSVLVTGYDILFFWVARMMMFGMYVAEDPALTAGKDPGQVQVPFKDIFLHGLIRDQ 541

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GN IDP++ I   G DALR+ L R    G D    +              +
Sbjct: 542 HGKKMSKSRGNGIDPLDWIRSYGADALRFTLARGAQPGGDLSVGEPHALAS--RSFVTKL 599

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N    ++  +     G +P  G+ T++D  IL     VL E+          +A   + 
Sbjct: 600 FNATKFAL--LNGAAPGELPDRGSLTDADRWILDRLDEVLAEVDAAFDAYEFGKACEALY 657

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               +   D Y +  K       +  RA +   V   V+  +  LL   +P +   ++  
Sbjct: 658 HFAWDELCDWYLELAK--VQFAADGARAESTRTVLGTVLDAVLRLLHPVIPFVTESLWKA 715

Query: 477 LFVAD 481
           L   +
Sbjct: 716 LTGGE 720



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 45  SGKPAYSIVLPPPNVTGTLHMGHALDHTLMDTLARRKRMQGYEVLWLPGMDHAGIATQTV 104

Query: 62  AQN--------------AGVTTKVFVDQNSR------NFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 105 VEKQLAVDGKTKEDFGRELFVEKVWDWKRESGGAIQWQMRALGDGVDWSRDRF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D G IY+      +S       +D EV  
Sbjct: 163 LSRAVQTMFKRLYDAGLIYRAERLVNWSPELRTAISDIEVKH 204


>gi|148255338|ref|YP_001239923.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407511|gb|ABQ36017.1| valyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 955

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 17/260 (6%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
            + ++  W  +     +T G+ D+    K +++P ++ V G DI+ F    W A ++   
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDDTPEVK-RYYPTNVLVTGFDIIFF----WVARMMMMG 546

Query: 284 LPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L   K+V      +       KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+
Sbjct: 547 LHFMKEVPFSTVYIHALVRDEKGAKMSKSKGNVIDPLALIDEHGADALRFTLAAMAAQGR 606

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       +        AN + N  SR   M             A    +  I    +  
Sbjct: 607 DIKLSTQRVDG--YRKFANKLWN-ASRFAEMNGCTVPVGFDPASAKETLNRWIAHEAAAA 663

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+ E ++    + A   +   V +   D Y +  KP  L + +P +A T   +     
Sbjct: 664 TREVTEALEAYRFNDAANAIYRFVWDVYCDWYVELAKPTLLGEDSPAKAET-RAMVAWAR 722

Query: 456 RQLAILLQAFVPKLANKIFD 475
            ++  LL  F+P +   +++
Sbjct: 723 DEILKLLHPFMPFITEALWE 742



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 19/176 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           H+GHA    + D+L RF R+ G DVL+  GTD  G      
Sbjct: 33  RDADPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + D++     +    L  S D      T ++  
Sbjct: 93  VERQLMERQQPGRREMGREKFLARVWQWKDESGGTIINQLKRLGASCDWGRERFTMDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                 ++ ++   G IYK      +  +     +D EV +            P++
Sbjct: 153 SKAVVKVFVELHRAGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGNLWYLRYPIE 208


>gi|317968252|ref|ZP_07969642.1| valyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 915

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 84/400 (21%), Positives = 143/400 (35%), Gaps = 69/400 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E+     +P  R ++V     + ++D  +SR+   
Sbjct: 352 PVEPLLSTQWFVKTEPLAARCREALENADPRFVPE-RWSKVYRDWLTDIRDWCISRQ-LW 409

Query: 216 WGIKIP------------------------------------------DDPQYIMYVWID 233
           WG +IP                                           DP   +  W  
Sbjct: 410 WGHRIPAWFVVSETGGVITDSTPYVVARDEAEAQSKADAQFGAGAVLEQDPDA-LDTWFS 468

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +       +++P  + V G DI+ F    +   A   +  +P      
Sbjct: 469 SGLWPFSTMGWPNPEAADLQRWYPTSVLVTGFDIIFFWVARMTMMAGAFTGQMPFQDVYI 528

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-- 348
                     K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D      
Sbjct: 529 HGLVRDENNRKMSKSAGNGIDPLLLIERYGADALRFALVREVAGAGQDIRLDYDRKSDTS 588

Query: 349 ---RVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R   M L          P P A   +D  ILS  +RV ++  
Sbjct: 589 ATVEASRNFANKLWN-ATRFALMNLGGETPSSLGEPDPAALQLADRWILSRLARVNRDSA 647

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVI 455
           E   +  +  A   +         D Y +  K       NP         T   V  + +
Sbjct: 648 ERYGSYGLGEAAKGLYEFAWNEVCDWYVELIKRRLNPGENPSAEALADQRTARQVLAKAL 707

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLD 490
            +L ++L   +P L+ +++  L    E      + + +LD
Sbjct: 708 NELLVMLHPLMPHLSEELWHGLNGEPEETFLALQPWPALD 747



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 19/169 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 37  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTILEK 96

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  Q+          L  S D      T +    +  
Sbjct: 97  QLKADGKRKEDLGREAFLEKAWEWKAQSGGTIVGQLRRLGYSVDWRRERFTLDAGCSEAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
              + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 157 IEAFNRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 205


>gi|196229356|ref|ZP_03128221.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196226588|gb|EDY21093.1| valyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 893

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 130/353 (36%), Gaps = 36/353 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E +F +  +  +      +   +F    ER  +V      G++D  +SR+   
Sbjct: 364 PIEPRLSEQWFLKYPSVAEAKACVADGKMKFF--PERWAKVYDHWLEGIQDWCISRQ-LW 420

Query: 216 WGIKI--------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           WG +I                          ++  W  +      T G+ +  D   AKF
Sbjct: 421 WGHRIPVWYRGDEIHCDITAPEGDGWKQDSDVLDTWFSSWLWPFATMGWPEKTDTL-AKF 479

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    +    +    +LP     F+      +G K+SKSLGN  DP
Sbjct: 480 YPTTDLVTGPDIIFFWVARMIMAGYEWMGDLPFKNVYFTGIIRDKQGRKMSKSLGNSPDP 539

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILK 371
           +++I + G DALR+ ++R    G D  +D+       N +L       +  +     +  
Sbjct: 540 LDLIAKYGADALRFGVMRSAPLGADILFDEK------NVELGRNFCTKLWNATRFRQMQG 593

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
                   P   T  D  IL+  S  + ++  ++       A + +         D Y +
Sbjct: 594 GASEGEIRPDLLTSDDRWILARLSDAIGDVSTSLDEYRFSDATSTLYRFFWNEFCDWYLE 653

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           A K       +  R +  L V   V+     +   F+P +  +I++ L    +
Sbjct: 654 ACKAVFFHSGDEARKANTLAVIDFVLAHTLRIFHPFLPFITEEIWNSLGFNSD 706



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 24/186 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    I            +GH     I D+L+R  R+ G +VL+  GTD  G       
Sbjct: 37  QRPAYSIVIPPPNVTGVLTLGHVLNNTIQDILSRRARMQGKEVLWLPGTDHAGIATQNVV 96

Query: 63  QNAGVTT------------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
           +                          + ++           L  S D      T +  +
Sbjct: 97  EKTLRKEGAMKHRDDLGREALVAKIWEWKEKYGGIIIQQLKKLGASCDWSRERFTMDPEY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPVQWME 161
                 ++  +  KG IY+G     +        +D+EV     +G  Y+ +   V+  E
Sbjct: 157 SKCVSRVFVDLYKKGLIYRGKRMVNWCPASLTALSDEEVEMKPQNGFMYHFK---VEVAE 213

Query: 162 EEGYFF 167
             G + 
Sbjct: 214 APGTWL 219


>gi|82753356|ref|XP_727645.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483588|gb|EAA19210.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 655

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 121/568 (21%), Positives = 240/568 (42%), Gaps = 82/568 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL----FTTGTDEHGQK 57
           + ++ + I+T I Y N +PHIGHAY  ++ D + RF ++   +      F +G DEHG K
Sbjct: 80  ENKKGIIITTPIYYGNDKPHIGHAYCNVLVDTIYRFEKIKNEENKKKIIFFSGMDEHGLK 139

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           I    +   +    +++  S  ++ M ++L++  + F RT+   H    + +WK + +KG
Sbjct: 140 IDNKTKELNMDKNKYLNNISNFYKKMNEMLNVDINLFYRTSNLFHKTFVQNIWKYLLNKG 199

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA-----------QHNPVQWMEEEGYF 166
            IYK  Y G+YS+ +E Y ++ EV K  + +                 N +   EE  YF
Sbjct: 200 YIYKDVYRGYYSINEERYLSEMEVEKMENQKKEKKEKGEKDEKNIATSNIIYIEEENSYF 259

Query: 167 FR--------------------------------LSAYQDKLLSYYESHPEFILPIERRN 194
           F                                  + +++  +S Y +     +P E++ 
Sbjct: 260 FNINKFKGFLINFYKSNENIISPSYLKKEIMYHIQNDFKNICISRYNTEWGIPIPDEQKG 319

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIK----------IPDDPQYIMYVWIDAL---TNYLTT 241
            +  + ++ L  +S                     I  + + I+  + D L     Y   
Sbjct: 320 TIYVWFEALLSYISSIAYVIKLYYNSKDENFDLKNITQNEEGILCTYNDILNLVDTYNDL 379

Query: 242 TGY--------------LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
             +               +N      K W   + VIGKDIL+FH I +   L S  + +P
Sbjct: 380 NNFENNKINLSNSKMDDKNNIRNLFKKIWNPYIQVIGKDILKFHGILYICLLNSLGIKIP 439

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + +  HG I ++ +K+SKSL N+I P  ++E+   D +R + +       D  + +  L+
Sbjct: 440 ENILCHGLIKNENKKMSKSLNNIISPFTLLEKYNKDVIRLYFIGSGNIYDDRNFKEKNLE 499

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                 L N +GNL+ R VS+ +++   +I     +  +   IL+        + +   N
Sbjct: 500 N-FEFFLRNSVGNLLYRIVSLCIENNYKIIKKNNLYNFT---ILNEFKNSKTYLIKLFNN 555

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                 L ++I  + ++++++   +PW++   N  + + ++Y   E I+  +I +  F+P
Sbjct: 556 MEYPLLLEKLIMFIKKINKFYTYNEPWKII-NNSTKFNFIIYEIFESIKFFSIFMYPFIP 614

Query: 468 KLANKIFDILF---VADENRCFQSLDQR 492
            ++  I   +    + +++     LD +
Sbjct: 615 NISLSILKNIGFESIDNDSISINMLDNQ 642


>gi|268317598|ref|YP_003291317.1| isoleucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335132|gb|ACY48929.1| isoleucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 1077

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 67/410 (16%), Positives = 134/410 (32%), Gaps = 23/410 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            HD  +            +    +    + +             +G++     N V W  
Sbjct: 396 PHDWRKGTPLMNYPVESWFIRTTAVKDRMIELNQTIHWHPPSIGEGRFGEWLRNNVDWAL 455

Query: 162 EEG--YFFRLSAYQDKLLSYYES------HPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                +   L  +Q      Y             L      E  +     L         
Sbjct: 456 SRQRYWGTPLPIWQSDRNPDYIEVIGSIEELRQKLGGTFPPEAYNPETGELDLHRPFVDR 515

Query: 214 FDWGIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
             W        + +   + VW D+         Y      +  + +PAD    G D    
Sbjct: 516 LTWPAPDGGTMRRVPDLIDVWFDSGAMPFAQWHYPFENQEAFRRTFPADFIAEGVDQTRG 575

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ ++  A ++  ++     V +   +  KGEK+SKS GNV+DP +V+E  G D +R++
Sbjct: 576 WFYTLHAIATMVMDSVAFRHVVVNGLVLDEKGEKMSKSKGNVVDPFDVVERYGADPVRWY 635

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTE 385
           ++      ++  + +  L+        N + N+ +   +    D   Y       G  TE
Sbjct: 636 MISNAPPWENIRFSERELEA-TRRRFFNTLENVYAFFATYANVDGFVYPAERMPVGERTE 694

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPD 442
            D  I+S  +  L E+    ++    RA   +   V E+ + Y     ++ W  +    +
Sbjct: 695 LDRWIISRLNSTLAEVDAAYEDYHPTRAARAIERFVDELSNWYIRRSRRRFWSARTGEQE 754

Query: 443 ---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                        E +   A+++    P  +  ++  L    E +  +S+
Sbjct: 755 NERDKQAAYQTVYECLETTALMMAPIAPFFSEWLYRALQEGSEVKGPESV 804



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 51/163 (31%), Gaps = 19/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N +P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 37  ENGPTFSFYEGPPTANGKPGIHHVLARTIKDIFCRYKTMKGFRVERKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
            +                       +  V +    +  + + +    D      T E  +
Sbjct: 97  VEKELGLEGRAQVEAFGIEKYNAACRRSVLRYKELWDQLTERIGYWVDLEHPYITFENTY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            +T   L K+I +KG +YKG    WYS       +  EV  G 
Sbjct: 157 IETVWWLIKQIYEKGLLYKGYKIQWYSPGSGTVLSSHEVSLGY 199


>gi|296535500|ref|ZP_06897687.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264170|gb|EFH10608.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 898

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 118/330 (35%), Gaps = 10/330 (3%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V    E  +F  +   Q   +S        I      +  +   ++  + L+ +R+    
Sbjct: 399 VPKHFENIFFSWMRDIQPWCISRQLWWGHQIPAWYAPDGSVFVARTEEEALAQARQKLGA 458

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
            + +  D   ++  W  +     +T G+ +       K++P D+ V G DI+ F    + 
Sbjct: 459 DVTLTRDED-VLDTWFSSALWPFSTLGWPNKTA-ELEKYYPGDVLVTGWDIIFFWVARMM 516

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                   ++P             KG+K+SKS GNVIDP+E+++  G DALR+ +     
Sbjct: 517 MMGIHFMGDVPFKTVYIHGLVRDEKGQKMSKSKGNVIDPLELVDSFGADALRFAIASLAT 576

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D    +  ++          I N  +R   M     D         T     IL   
Sbjct: 577 PGRDVKLGRKRVED--FRSFGTKIWN-AARFCEMNGIGPDAGFDPAKVRTPLARWILDAS 633

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +  + E    ++   +    +     V     D + +  KP  L   +    + V     
Sbjct: 634 NTAIAEANAALEAYRMDDYASACYRFVWNSFCDWFLEFAKP-ALNGPDSAEKAEVKGAAQ 692

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482
            V+  +  LL   +P L  +++D      E
Sbjct: 693 YVLGTILKLLHPVMPYLTEELWDRFGYGPE 722



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 20/169 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--------- 58
           +  I  PN     HIGHA    I D L R+ R+ G D L+  GTD  G            
Sbjct: 37  TIMIPPPNVTGSLHIGHALTFTIQDTLIRWRRMQGRDALWQPGTDHAGIATQMVVERLLA 96

Query: 59  -------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
                      +        +  ++  +       L  S D      T ++      R +
Sbjct: 97  GQGVQRREIGREKFLEHVWAWKGESGGSITRQLRRLGASLDWPRERFTMDEGLSQAVREV 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +  + ++G IY+      +  + +   +D EV              PV+
Sbjct: 157 FVTLHEQGLIYRDRRLVNWDPKFQTAISDLEVESRDVKGSLWHLRYPVE 205


>gi|319408777|emb|CBI82434.1| Valyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 907

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 43/356 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++   +      +          +P        ++++  ++   +SR+   
Sbjct: 377 PIEPFLTDQWYVNAAELAKPAVEAVRQGKTQFVPASWEKTYFNWME-NIQPWCISRQ-LW 434

Query: 216 WG--IKIPDDPQYIM------------------------------YVWIDALTNYLTTTG 243
           WG  I     P  ++                                W  +     +T G
Sbjct: 435 WGHQIPAWYGPDGVIFVEKSEEEALVSALSHYGKEVQLTRDQDVLDTWFSSALWPFSTLG 494

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +     K  F+P  L V G DI+ F    +          +P P          H G 
Sbjct: 495 WPEKTTELKT-FYPTSLSVTGFDIIFFWVARMMMMGIHFIGEVPFPTVYVHALVRDHTGA 553

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+E+I++   DALR+ L    A G+D   D   +      + A  + N 
Sbjct: 554 KMSKSKGNVIDPLELIDQYSADALRFTLAIMAAQGRDVKLDPSRVAG--YRNFATKLWN- 610

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M    +        A    +  I++  S+ +  +   +++   + A + +   V
Sbjct: 611 ATRFAEMNGVRHGLPFKPEEAKLTFNRWIVTELSKTVSAVTAGIESYKFNEAASALYRFV 670

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP   + ++ D        T  V+ ++  LL  F+P +  K++ 
Sbjct: 671 WNTLCDWYLEFLKP-VFQGSDEDSKKEAQACTAWVLDEVYKLLHPFMPHMTEKLWS 725



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 25/172 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNTTIQDIMVRFQRMRGKNVLWQPGLDHAGIATQMVVERQLA 98

Query: 68  TTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +    Q                          R +    D S + F  T ++      
Sbjct: 99  EHQEPTRQEMGREKFVERVWKWRRETGGIIVNQLRRLGVSCDWSRERF--TMDEGLSQAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             ++  +  +G IYK      +  +     +D EV       +      P++
Sbjct: 157 CEVFVTLYKQGLIYKDKRLVNWDPKLLTAISDLEVDSKEVKGHLWHFRYPLE 208


>gi|300088135|ref|YP_003758657.1| valyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527868|gb|ADJ26336.1| valyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 880

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 130/362 (35%), Gaps = 44/362 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +        +      +F ++       +    S    ILP  R   V       ++D  
Sbjct: 351 HCQRCATVAEPTASRQWFVKMEPLAAPAIKAVTSGEIKILPE-RFTRVYLNWMENIRDWC 409

Query: 209 LSRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTNYL 239
           +SR+   WG +IP                              DP  ++  W  +     
Sbjct: 410 VSRQ-LWWGHRIPVWYCQACGETIVAIETPDSCHKCSSADIEQDPD-VLDTWFSSGLWPH 467

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ ++ D  + +F+P  +   G DIL F    +       +  +P            
Sbjct: 468 STLGWPNDSDDLR-RFYPTGVMETGYDILFFWVARMITMGLHNTGKIPFHTVYLHGLIRD 526

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KGEK+SK  GNV++P+++I++ G DALR+ +    + G D     + L+     + AN 
Sbjct: 527 EKGEKMSKVKGNVLNPLKLIDQYGTDALRFGITTGNSPGNDIKLSLNRLEA--GRNFANK 584

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N  SR V   L                D  ILS  +RV+ ++   M+      A   +
Sbjct: 585 LFN-ASRFVIGHLNRTAPGQLNTAVLPAEDRWILSRLNRVIGQVNAFMEEYQFGEAERAI 643

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K             + L V ++V+     LL  F+P +  +I+ 
Sbjct: 644 HDFIWGEFCDWYIELSKVRLQSGDG----QSPLPVLLKVLDTSLRLLHPFMPFVTEEIWQ 699

Query: 476 IL 477
            L
Sbjct: 700 YL 701



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK---- 57
            ++    +         + H+GHA    + D++ R+HR+ G   L+  G D  G      
Sbjct: 39  SDKPPFTVIMPPPNVTGELHLGHALTAALEDIMTRWHRMKGEPALWLPGVDHAGIAAQVV 98

Query: 58  IAKAAQNAGVTT------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
           + +       T               + +      R     L  S  +D  + T +    
Sbjct: 99  VERMLAKENKTKYDLGREAFTERMWQWANSCRDTIRRQHMKLGASCDWDREVFTLDDGPS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R  +K + D+G IY+G     +  R     +D EV       +      P+
Sbjct: 159 LAVRTTFKNLYDQGLIYRGERIINWCPRCHTAISDLEVDHKDLAGHLWHIKYPL 212


>gi|228997294|ref|ZP_04156916.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|229004919|ref|ZP_04162646.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228756267|gb|EEM05585.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228762386|gb|EEM11311.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 1033

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 151/409 (36%), Gaps = 34/409 (8%)

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
              R    +      S+  FIRTTE         + +      D            R   
Sbjct: 386 HCWRCDSPLLYYAGESW--FIRTTE---------IKETFLKNNDAVTWYPDHMKHGRFGK 434

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +    E     +         P+   E +        +  K +     H           
Sbjct: 435 FL---ENMVDWNISRKRYWGTPLNVWECKNC---DHQFAPKSIDELRKHSVGHT-----A 483

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   K  + ++ +  +    G  +   P+ ++ VW D+ +       Y         +
Sbjct: 484 ENLELHKPYVDEVKVCCEK--CGSSMTRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEE 540

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PAD+   G D     F+++   A L +  +P  + +     +  +G+K+SKS GN +D
Sbjct: 541 QFPADVIAEGVDQTRGWFYSLLAVAALYTGKVPYKRVLSLGHVLDEQGQKMSKSKGNALD 600

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILK 371
           P+E++E+ G DALR+ L+ + A      +  +   +   + L + + N+ S   +   L 
Sbjct: 601 PVELVEKFGADALRWALLVDSAPWNAKRFS-ERTVQEAKSKLVDTLVNVYSFYVLYTNLD 659

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF-- 428
            Y+         T+ DE +LS     ++++R  +       A  ++  LV EV + Y   
Sbjct: 660 KYNPKEKYEVKRTKLDEWVLSRLHSTVKQVRNALDEYQFTNAAREIAVLVDEVSNWYVRR 719

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + WE    N ++A+       EV+  L+ LL  F P +A  I   L
Sbjct: 720 SRNRFWE-SGMNLEKAAA-YETLHEVLVTLSKLLAPFTPFVAEDIHLNL 766



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMTGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +    D      T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMEAPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|110004402|emb|CAK98740.1| probable valyl-trna synthetase protein [Spiroplasma citri]
          Length = 888

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 136/362 (37%), Gaps = 42/362 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++  + +K++ +  S  +      R N  +      ++D  +SR+   W
Sbjct: 355 VEPYLSDQWFVKMEYFAEKIIKFQSSTNKIQFYPPRFNITLINWMKNVQDWCISRQ-LWW 413

Query: 217 GIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +I                              ++  W  +    +T+ G+  +     
Sbjct: 414 GHQIPAWYYKDDSTKIHVGLTPPDNSKNWIQDADVLDTWFSSALWPMTSLGWNWDKK-LF 472

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSA--NLPLPKKVFSHGFILHKGEKISKSLGNV 310
             ++P ++ V G DI+ F         L      P    +        +G K+SKSLGN 
Sbjct: 473 QHYFPTNVLVTGYDIIFFWVSRMMFESLEFTKEKPFNDVLIHGLIRDEEGRKMSKSLGNG 532

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP++VI+E G D LRYFLV   A G+D  +  + +    N    N + N        + 
Sbjct: 533 VDPMDVIKEYGADTLRYFLVTNSAPGQDLRFSLEKVNSAWN--FINKLWNAARYVEMNLT 590

Query: 371 KDYDGMIPTPGAF---------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            ++  ++                  D+ ILS  ++ + +++ NM+          +   V
Sbjct: 591 NNFKPLVNFEIEIKNLLLNHQENAIDQWILSELAKTITKVQTNMEKYEFVLVGKDLYDFV 650

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                  Y +  K   L+  N             V++Q+ I+L  F+P +  +I+  L +
Sbjct: 651 WNKLCSWYIELTKV-NLQSNNATIKMVSTQTLFYVLKQILIMLHPFIPFVTEEIYQKLNL 709

Query: 480 AD 481
            +
Sbjct: 710 KE 711



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         + H+GHA++  + D++ R+ +L G D L+  G D  G      
Sbjct: 34  SKQPSFSIVIPPPNVTGKLHLGHAWDTTLQDLIIRYKKLLGFDTLYLPGMDHAGIATQAK 93

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +     TK                  + ++ +   R+    L ++ D      T     
Sbjct: 94  VEERLCVTKNILRHDLGREKFIEQVWAWKEEYAEIIREQWAKLGLALDYSREQFTLNNNL 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++  +  KG IY+G     +    +   ++ EV  
Sbjct: 154 SAAVQKVFIDLYQKGLIYRGKRIISWDPVQKTALSNIEVIY 194


>gi|257058592|ref|YP_003136480.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588758|gb|ACU99644.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 909

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 134/376 (35%), Gaps = 57/376 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L++ + +       +R  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIEPLSKKALTFLDEYNSPRFVPDRWTKVYRDWLIKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I +  DP  ++  W  
Sbjct: 414 WGHQIPAWYVISETNNEITDHTPFIVADNEDEAIKKAQEQYGENITLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +N +    +++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPENTE-DLTRYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQIPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                   G+K+SKS  N IDP+ +IE  G DALRY L++E+A        +      + 
Sbjct: 532 HGLVRDENGKKMSKSANNGIDPLILIENYGTDALRYTLIKEVAGAGQDISLQYNRKTDES 591

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRE 403
                + + AN + N     +  +  +      +P        D  ILS   +++Q+ R 
Sbjct: 592 ESVEASRNFANKLWNAARFVMMNLQGNTPKTLGVPDREKLELCDRWILSRFHQLVQQTRN 651

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++N  +  A   +   +     D Y +  K    K +N +           V+     L
Sbjct: 652 YVENYGLGEAAKGLYEFIWGDFCDWYIELVKTRLWKDSNTESRLVAQQTLAYVLDNTLRL 711

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 712 LHPFMPHITEEIWQTL 727



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 23/170 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------- 58
              I           H+GHA+E  + DVL R+HR+ G + L   GTD     +       
Sbjct: 41  PYSIVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMCGHNTLCLPGTDHASIAVHTILDRQ 100

Query: 59  -------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                         K  + A    +          + M    D S + F  T ++     
Sbjct: 101 LKAEGKTRYDIGREKFLEKAWQWKEESGGTIVNQLKRMGLSADWSRERF--TLDEGLSKA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQH 154
            R  + ++ + G IY+G Y   +     +  +D EV  K  DG  ++ ++
Sbjct: 159 VRKAFIQLYEAGLIYRGNYLVNWCPASLSAVSDLEVESKEVDGHLWHFRY 208


>gi|239931291|ref|ZP_04688244.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291439664|ref|ZP_06579054.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291342559|gb|EFE69515.1| valyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 883

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 128/362 (35%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGRVTIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPDGEVVCVGPDEEPPGGEGWHQDTDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 472 PERTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  + V+ E+     +    +    +    
Sbjct: 588 ATRFALMNGATVEGPLPDASRMSPTDRWILSRLNSVVAEVDAYYDDFQFAKLSDALFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K        P   S    V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSKTTFQAGGEPAEVS--QRVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGHETLWQPGMDHAGIATQNV 104

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELAKEGKSRHDLGREAFVERVWQWKGESGGQISGQMRRLGDGVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSKAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 207


>gi|327400640|ref|YP_004341479.1| Valyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316148|gb|AEA46764.1| Valyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 866

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 84/443 (18%), Positives = 161/443 (36%), Gaps = 31/443 (6%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 ++      D  G+   KA + AG+TTK   ++   + +    ++          
Sbjct: 277 KWWKKHNLELRMVLDRTGRLNEKAGKYAGLTTKEAREKIIEDLKAEGRLIK--------- 327

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++       + W+               +  +  E    +    K       +     V
Sbjct: 328 -QEDVEQNVGVCWRC--KTPVEIIAEEQWFVKIDKERILKEARKIKWFPEHMLSRLEGWV 384

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           + ME +    R   +   +  +Y  +   I+  +     +   K      +        G
Sbjct: 385 EGMEWDWVISRQRIFATPIPVWYCKNCGAIVVAKEEWLPVDPTKD-----APKEPCPQCG 439

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--W 275
               +    ++  W+D+    L  TG+         K +P  L   G DI+R  A Y   
Sbjct: 440 STEFEGEDDVLDTWMDSSITPLAITGWPY-----DWKEYPTHLRPQGHDIIRTWAFYTIL 494

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L+  +P  + V +   +   G K+SKSLGN+I P EV+E+ G DALR +    +  
Sbjct: 495 RSLALANKIPWYEIVINGMVLGEDGRKMSKSLGNIISPEEVLEKYGADALRQWAATGVV- 553

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +    +     +       +++  ++S I KDY            +D  ILS  +
Sbjct: 554 GSDVIFTWKEVIAA--SRFQQKFWSILRFTMSHI-KDYTPSEDDEKLLRIADRWILSKLN 610

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R+++++ E+M+N   + AL  + S       D Y +  K   L   + +      +V   
Sbjct: 611 RLIKDVDEHMENYRFNEALKAIRSFTWYEYADNYLEIVK-NRLYSGSDEEKRAAKFVLYN 669

Query: 454 VIRQLAILLQAFVPKLANKIFDI 476
            +  L  LL    P +A + ++I
Sbjct: 670 AMDALIRLLAPITPFIAEECWNI 692



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I T   YP    HIG+       D +AR+ R+ G +V+F  G D HG      
Sbjct: 31  SEKPHYIIDTPPPYPTGSFHIGNTLNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     +K              F ++N    R     L  S D      T    ++   
Sbjct: 91  VEEMHGISKNDVPREEFRRLCVEFTEKNIEKMRSAMRRLGFSIDWSKEYITMYPEYYTKT 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ + ++ ++G IYKG +   +  R E      E+  
Sbjct: 151 QVSFVRMYNQGLIYKGYHPVIFCPRCETTIALAEIEY 187


>gi|218245548|ref|YP_002370919.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166026|gb|ACK64763.1| valyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 909

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 134/376 (35%), Gaps = 57/376 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L++ + +       +R  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIEPLSKKALTFLDEYNSPRFVPDRWTKVYRDWLIKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I +  DP  ++  W  
Sbjct: 414 WGHQIPAWYVISETNNEITDHTPFIVADNEDEAIKKAQEQYGENITLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +N +    +++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPENTE-DLTRYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQIPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                   G+K+SKS  N IDP+ +I+  G DALRY L++E+A        +      + 
Sbjct: 532 HGLVRDENGKKMSKSANNGIDPLILIKNYGTDALRYTLIKEVAGAGQDISLQYNRKTDES 591

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRE 403
                + + AN + N     +  +  +      +P        D  ILS   +++Q+ R 
Sbjct: 592 ESVEASRNFANKLWNAARFVMMNLQGNTPKTLGVPDREKLELCDRWILSRFHQLVQQTRN 651

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++N  +  A   +   +     D Y +  K    K +N +           V+     L
Sbjct: 652 YVENYGLGEAAKGLYEFIWGDFCDWYIELVKTRLWKDSNTESRLVAQQTLAYVLDNTLRL 711

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 712 LHPFMPHITEEIWQTL 727



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 23/170 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------- 58
              I           H+GHA+E  + DVL R+HR+ G + L   GTD     +       
Sbjct: 41  PYSIVIPPPNVTGSLHMGHAFEDCLMDVLMRYHRMCGHNTLCLPGTDHASIAVHTILDRQ 100

Query: 59  -------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                         K  + A    +          + M    D S + F  T ++     
Sbjct: 101 LKAEGKTRYDMGREKFLEKAWQWKEESGGTIVNQLKRMGLSADWSRERF--TLDEGLSKA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQH 154
            R  + ++ + G IY+G Y   +     +  +D EV  K  DG  ++ ++
Sbjct: 159 VRKAFIQLYEAGLIYRGNYLVNWCPASLSAVSDLEVESKEVDGHLWHFRY 208


>gi|319899110|ref|YP_004159203.1| Valyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403074|emb|CBI76629.1| Valyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 907

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 142/392 (36%), Gaps = 14/392 (3%)

Query: 92  DDFIR----TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           D F+      +     D C  +   +       +        L D+ Y N  ++ + A  
Sbjct: 340 DRFVARNRIVSWMEERDYCVTIQDHLHAVPHGDRSGVPIEPLLTDQWYVNAAKLAEPAIE 399

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                +   +    E+ YF  +   Q   +S        I      + +I   KS  + L
Sbjct: 400 AVRQGKTKFIPASWEKTYFNWMQNIQPWCISRQLWWGHQIPAWYGPDGMIFVEKSEKEAL 459

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
             +   +   +++  D   ++  W  +     +T G+ D        F+P  L V G DI
Sbjct: 460 DSALSYYGKTVQLTRDQD-VLDTWFSSALWPFSTLGWPDKTM-ELTNFYPTSLSVTGFDI 517

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    +          +P P            G K+SKS GN++DP+E+I++   DAL
Sbjct: 518 IFFWVARMMMMGIHFMGEVPFPTVYVHALVRDQHGAKMSKSKGNIVDPLELIDQYSADAL 577

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ L    A G+D   +   +      +    + N  +R   M    +D           
Sbjct: 578 RFTLAIMAAQGRDVKLNPSRVAG--YRNFITKLWN-ATRFAEMNGVRHDLSFKPEKTKLA 634

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
            +  IL+  S+ +  + + ++N   + A   +   +     D Y +  KP   + ++ D 
Sbjct: 635 FNRWILTELSKTVSAVTKGIENYKFNDAAHALYRFIWNALCDWYLELLKP-VFQGSDEDS 693

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                  T  V+ ++  LL  F+P +  +++ 
Sbjct: 694 KKEAQACTAWVLDEVYKLLHPFMPHVTEELWS 725



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 25/172 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNATIQDIMVRFQRMRGKNVLWQPGMDHAGIATQMVVERQLA 98

Query: 68  TTKV---------------FVDQNSR------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +                +  +N          + +    D S + F  T ++      
Sbjct: 99  ERQEPARQEMGREKFIERVWKWRNEAGGIITNQLKRLGVSCDWSRERF--TMDEGLSQAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             ++  +  +G IYK      +  R     +D EV       Y      P++
Sbjct: 157 LEVFVTLYKQGLIYKDKRLVNWDPRLLTAISDLEVELKEIKGYLWHFRYPLE 208


>gi|120404905|ref|YP_954734.1| valyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957723|gb|ABM14728.1| valyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 897

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/402 (18%), Positives = 133/402 (33%), Gaps = 47/402 (11%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           D ++  ++   +L DE    +++        +      P++      ++ ++ +      
Sbjct: 331 DRFEARFAVRQALADEGRIVEEKRPYLHSVGHSERSGEPIEPRLSLQWWVKVESLAKAAG 390

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY--------- 226
               +    I P         +V   + D  +SR+   WG  I I   P           
Sbjct: 391 DAVRNGRTVIHPASLEPRWFGWVD-NMHDWCISRQ-LWWGHRIPIWHGPNGETVCVGPDE 448

Query: 227 -----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
                      ++  W  +     +T G+ D+     AKF+P  + V G DIL F     
Sbjct: 449 TPPEGWEQDPDVLDTWFSSALWPFSTMGWPDHTA-ELAKFYPTTVLVTGYDILFFWVARM 507

Query: 276 PAFLLSAN--------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
             F                   +P              G K+SKS GN IDP++ +E  G
Sbjct: 508 MMFGTFVGDDPAITGGGARGPQVPFENVFLHGLIRDEHGRKMSKSRGNGIDPLDWVEMFG 567

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L R  + G D    +D    R + + A  + N    ++  +       +P   
Sbjct: 568 ADALRFTLARGASPGGDLAIGEDH--ARASRNFATKLFNATRFAL--LNGASPAPLPPSD 623

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             T++D  IL     V  E+   + N    RA   +     +   D Y +  K       
Sbjct: 624 QLTDADRWILGRLEEVRIEVDAALDNYEFSRACESLYHFAWDEFCDWYLELAK--VQLGQ 681

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                +    V    +  L  LL   +P +   ++  L   +
Sbjct: 682 EEAHTARTTAVLAFALDVLLKLLHPVMPFVTEVLWKALTGGE 723



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA +  + D L R  R+ G +VL+  G D  G       +
Sbjct: 51  KPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQTVVE 110

Query: 64  N--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +           R + D +D S D F  T ++   
Sbjct: 111 KQLSADGKTKEDFGRELFIDKVWDWKRESGGTIGGQMRRLGDGVDWSRDRF--TMDEGLS 168

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++K++ D G IY+      +S   E   +D EV  
Sbjct: 169 RAVRTIFKRLFDAGLIYQAERLVNWSPVLETAISDLEVKY 208


>gi|297569024|ref|YP_003690368.1| valyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924939|gb|ADH85749.1| valyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 917

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/388 (19%), Positives = 135/388 (34%), Gaps = 66/388 (17%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+      +F  +     +           +LP    N    ++   ++D  
Sbjct: 360 HCYRCQTVVETALSRQWFVAVKPLAQRAADTVRQGEINLLPKMWHNTFYEWMD-NIRDWC 418

Query: 209 LSRKTFDWGIKIP--------------DDPQ--------------YIMYVWIDALTNYLT 240
           +SR+   WG +IP               DP                ++  W  +     +
Sbjct: 419 ISRQ-IWWGHRIPAWTCEACGELIVEEHDPDLCPKCGSSSLHREEDVLDTWFSSALWPFS 477

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-- 298
           T G+ +        F+P  + +   DIL F    W A ++   L    +V      LH  
Sbjct: 478 TLGWPEKTK-ELQMFYPTSVLITSFDILFF----WVARMMMMGLHFMDQVPFRDVYLHAL 532

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS GNV+DP+E++++ G DALR+ +    A G+D    ++ ++       
Sbjct: 533 VRDKHGKKMSKSKGNVLDPLELMDQYGTDALRFTMAAFAAQGRDIKLAEERIEG--YRHF 590

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPG--------------------AFTESDESILSVC 394
            N + N    ++  I       +  PG                      +     ILS  
Sbjct: 591 INKLWNAARFTLMQISDHQAPHLAAPGDRLSREQSLAQGGKADGTTDELSLPHRWILSRA 650

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            +V  E+   + +   + A       V     D Y +  KP EL   +P   +    V +
Sbjct: 651 GKVAGEVGRALDDYRFNDAANAAYQFVWKEFCDWYLEWIKP-ELYGDDPALKARSRAVLL 709

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVA 480
            V+  +  +L   +P +  +I+  L  A
Sbjct: 710 RVLEDILKILHPMIPFVTEEIWHALPGA 737



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 49  ESRPSFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAGIATQNV 108

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + +++     +    L  S D      T ++   
Sbjct: 109 VERQLAAKGVSRQELGRDKFIERVWQWKEESGGQIINQLKRLGCSCDWERERFTMDEGLS 168

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              R ++ ++  +G IY+G Y   +  R      D EV  
Sbjct: 169 QAVRTVFVRLYKEGLIYRGNYIINWCPRCHTALADVEVEH 208


>gi|298530509|ref|ZP_07017911.1| valyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509883|gb|EFI33787.1| valyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 884

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 135/379 (35%), Gaps = 39/379 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 +       ++      +F ++     K      S    I+P +       ++  
Sbjct: 340 HRHSVGHCYRCSAVLEPYVSRQWFVKVGPLASKARDAVSSGDTRIVPGQWAKTYFEWMD- 398

Query: 203 GLKDLSLSRKTFDWGIKIP--------------DDP--------------QYIMYVWIDA 234
            ++D  +SR+   WG +IP              +DP              Q ++  W  +
Sbjct: 399 NIRDWCISRQ-IWWGHRIPAWTCLDCGELMVTKEDPTVCTRCESSRLEQDQDVLDTWFSS 457

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D+      KF+P  + V   DIL F    +          +P       
Sbjct: 458 ALWPFSTLGWPDDTR-DLQKFYPTSVLVTAFDILFFWVARMMMMGVHFMEQVPFRDVYIH 516

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                  G+K+SKS GNVIDP+ ++++ G DA R+ L    A G+D    +D ++     
Sbjct: 517 ALVRDASGQKMSKSKGNVIDPLLMMDKYGTDAFRFTLTSLAAMGRDIKMSEDRVEG--YR 574

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              N I N    S+ M L++             + + IL     V   +R+ ++N   + 
Sbjct: 575 HFINKIWNAARFSL-MHLQEPPRRFHASAVDGLAHQWILHRLEEVKDRVRDAVENYRFND 633

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A   +   V     D Y +  KP EL   +            +V+ ++ ILL   +P   
Sbjct: 634 AAQTMYQFVWHSFCDWYLELIKP-ELYGEDEAAKEQARSNLSQVLSEIIILLHPMIPFAT 692

Query: 471 NKIFDILFVADENRCFQSL 489
            +I+  L   +     + L
Sbjct: 693 QEIWSRLPGRENQDLSREL 711



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 22/174 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D+L R+HR  G DVL+  GTD  G       + 
Sbjct: 37  KSYSIVIPPPNVTGTLHMGHALNLTLQDILCRYHRQQGYDVLWVPGTDHAGIATQNVVEK 96

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           +                        + +  +       +   +D S   F  T +     
Sbjct: 97  SLAAQGTTRQDLGREEFVRQVWQWKEEYGGKILNQISRIGASVDWSRLRF--TMDDGLSR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             R ++ K+ ++G IY+G Y   + +R     +D E+              P++
Sbjct: 155 AVREVFVKLYEQGLIYQGDYIINWCIRCHTALSDLEMEYSEVDGGLYHLRYPLE 208


>gi|296170485|ref|ZP_06852072.1| valine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894837|gb|EFG74559.1| valine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 885

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/361 (20%), Positives = 121/361 (33%), Gaps = 52/361 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+            +    I P        ++V   + D  +SR+   
Sbjct: 360 PIEPRLSLQWWVRVETLAKAAGDAVRNGDTVIHPASLEPRWFAWVDD-MHDWCISRQ-LW 417

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 418 WGHRIPIWYGPGGEQVCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTLGWPETTP-ELE 476

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL--------------PLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                    P              
Sbjct: 477 KFYPTSVLVTGYDILFFWVARMMMFGTFVGADDAITLDGRRGPQVPFTDVFLHGLIRDEF 536

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 537 GRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFCTKLF 594

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   +       + P  G  T++D  IL     V  E+   +      RA   +  
Sbjct: 595 N-ATRYALLNGAQLAPL-PGHGELTDADRWILGRLEEVRTEVDAALDGYEFSRACEALYH 652

Query: 420 LVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   D  +    V   V+  L  LL   +P L   ++  
Sbjct: 653 FAWDEFCDWYVE------LAKTQLADGNAHTTAVLAAVLDTLLRLLHPVIPFLTEALWQA 706

Query: 477 L 477
           L
Sbjct: 707 L 707



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 55/162 (33%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 40  SNKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSV 99

Query: 62  AQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +  S D F  T ++ 
Sbjct: 100 VERQLAVDGKTKEDFGRELFVEKVWDWKRESGGAIGGQMRRLGDGVAWSRDRF--TMDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 158 LSRAVRTIFKRLYDAGLIYRAERLVNWSTVLQTALSDIEVTY 199


>gi|310826172|ref|YP_003958529.1| isoleucyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308737906|gb|ADO35566.1| isoleucyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 1039

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/441 (17%), Positives = 154/441 (34%), Gaps = 72/441 (16%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                 WK      D        W     + +  +  ++   +  +      P+ +  + 
Sbjct: 348 KYTETPWKGRFVMEDGLDIEIITWLKENGKLFKKEKVLH---NYPHCWRCKTPLLYYAKP 404

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG------ 217
            ++  ++  +D+L+    ++     P     +        L D ++SR    WG      
Sbjct: 405 SWYIEMTKIKDRLIEN--NNGVDWYPEFVGEKRFGNWLENLNDWAISRSR-YWGTPLPIW 461

Query: 218 --------------------------------------------IKIPDDPQ----YIMY 229
                                                             P      ++ 
Sbjct: 462 RCDDENCGELASVGSRAELAERAIEDISEDIELHRPYVDDVHLRCPKCGKPMTRVKDVID 521

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLP 287
            W D+ +       Y           +PAD    G D     F+++   +  ++   P  
Sbjct: 522 CWFDSGSMPFAQYHYPFENKELWESQYPADFICEGIDQTRGWFYSLLAISSFVTGKSPYK 581

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K + +   +  +G+K+SKS GN +DP E+ ++ G DALR++L+          +D +GLK
Sbjct: 582 KVLVNDLILDAEGQKMSKSRGNTVDPFELFDQYGADALRWYLLYVSPAWTPTRFDVEGLK 641

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIR 402
           +   +   N + N  +     +  + DG+ P           E D  ILS  +R++QE+R
Sbjct: 642 EVQ-SKFFNTLKNTYNFFT--LYANTDGIDPRTFFVDYHKRPEIDRWILSKYNRLVQEVR 698

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             M+   + +A+ ++ + V+E   + Y    +         +    V   T EV+  LA 
Sbjct: 699 GEMEIYDLTKAVRKIQNFVNEDLSNWYIRRNRRRFWGSELTEDKKAVFNTTFEVLEGLAR 758

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           L+  F P ++ +I+  L  A+
Sbjct: 759 LVAPFAPYISEEIYTKLTGAE 779



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E           N +P I H     + D + ++  + G  VL   G D HG  +    
Sbjct: 38  DAENFVFYEGPPTANGKPGIHHVIARTLKDSVCKYQTMKGYRVLRKAGWDTHGLPVEIEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       K  V    + +R+M+  +   I  ++   T +  + 
Sbjct: 98  EKQLGISSKPEIEAYGIAEFNKKCKDSVFSYEKQWREMSKRMGYFIDLENPYITLDNNYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   +  K  ++G IY+G     Y  R        EV +G  
Sbjct: 158 ESVWWILNKFFNEGFIYEGHKILPYCPRCGTGLASHEVAQGYQ 200


>gi|94263446|ref|ZP_01287259.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456176|gb|EAT06315.1| Valyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 898

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 134/379 (35%), Gaps = 60/379 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       V+      +F  +     +  +   +    +LP    N    +++  ++D  
Sbjct: 347 HCYRCQTVVEPSLSPQWFVAVKPLAQRATAAVRAGEIQLLPKMWHNTFYDWME-NIRDWC 405

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                                 ++  W  +     +
Sbjct: 406 ISRQ-IWWGHRIPAWSCQACGELVVAEESPDLCPACGSANLSRESDVLDTWFSSALWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-- 298
           T G+ +     K  F+P  + +   DIL F    W A ++   L    +V      LH  
Sbjct: 465 TLGWPEQTRELK-MFYPTSVLITSFDILFF----WVARMMMMGLHFMDEVPFRHVYLHAL 519

Query: 299 ----KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS GNV+DP+E+++  G DALR+ +    A G++    ++ ++       
Sbjct: 520 VRDKHGQKMSKSKGNVLDPLELMDRYGTDALRFTMAAFAAQGREIKLAEERIEG--YRHF 577

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP--------------TPGAFTESDESILSVCSRVLQE 400
            N + N    ++  +  +     P                   +  D  ILS  SRV   
Sbjct: 578 INKLWNAARFTLMQLDDEVSEQPPHTLRRPVTEGSLSSDSATLSLPDRWILSRSSRVAAA 637

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   + +   + A +     V     D Y +  KP EL    P        V + V+  +
Sbjct: 638 VGGALDDFRFNDAASAAYQFVWKEFCDWYLEWIKP-ELYGDEPAARERSRRVLLTVLEDI 696

Query: 459 AILLQAFVPKLANKIFDIL 477
             +L   +P +  +I+  L
Sbjct: 697 LKMLHPMIPFVTEEIWHAL 715



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I           H+GHA    + D+L R+ R+ G +VL+  GTD  G      
Sbjct: 36  EDKPGFSIVIPPPNVTGVLHVGHALNNTLQDILVRYRRMQGYNVLWLPGTDHAGIATQNV 95

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++     +    L  S  +D    T +    
Sbjct: 96  VERQLADQGQSRHKLGREQFIERVWQWKEESGGQIINQLKRLGCSCDWDRERFTLDAGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + ++ ++  +G IYKG Y   +  R      D EV     
Sbjct: 156 AAVKKVFVQLYREGLIYKGNYIINWCPRCLTALADIEVEHEEC 198


>gi|172039171|ref|YP_001805672.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700625|gb|ACB53606.1| valyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 909

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 139/383 (36%), Gaps = 61/383 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L + + +       ER  +V       LKD  +SR+   
Sbjct: 357 PVEPLLSTQWFVKIDPLSQKALKFLDENNSPNFVPERWKKVYRDWLVKLKDWCISRQ-LW 415

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I++  DP  ++  W  
Sbjct: 416 WGHQIPAWYVISETNGEITDNTPFIVAHSEQEALEKAKKDYGDTIQLEQDPD-VLDTWFS 474

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ DN    K  ++P    V G DI+ F    +   A   +  +P      
Sbjct: 475 SGLWPFSTLGWPDNTQDLKT-YYPTSTLVTGFDIIFFWVARMTMMAGYFTDKMPFQDVYI 533

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                   G+K+SKS  N IDP+ +IE+ G DALRY L++E+A        +      + 
Sbjct: 534 HGLVRDENGKKMSKSSNNGIDPLILIEKYGTDALRYTLIKEVAGAGQDISLQYDRKTDES 593

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R V M LK         P       SD  ILS   + +Q+ R
Sbjct: 594 ESVEASRNFANKLWN-AARFVMMHLKGETPQSLGTPEIDKLELSDRWILSRFHQTVQQTR 652

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++++   +  A   +   +     D Y +  K   L    P R          V+     
Sbjct: 653 DDIKAYGLGEAAKGLYEFIWGDFCDWYIELVKT-RLWDETPSR-EVARQTLAYVLDGTLK 710

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
           LL  F+P +  +I+  L  +++ 
Sbjct: 711 LLHPFMPHITEEIWQTLTQSNDQ 733



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 53/149 (35%), Gaps = 22/149 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           KE E   I           H+GHA+E  + DVL R+HR+ G + L   GTD     +   
Sbjct: 39  KEGETYSIVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMCGYNTLCLPGTDHASIAVHTV 98

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  + A    +    +     + M    D S + F  T ++ 
Sbjct: 99  LDRQLKAEGITRYDIGREKFLEKAWEWKQESGGKIVNQLKKMGLSADWSRERF--TLDEG 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSL 130
                R  + K+ + G IY+G Y   +  
Sbjct: 157 LSKAVRTAFVKLYEAGLIYRGNYLVNWCP 185


>gi|160915954|ref|ZP_02078162.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
 gi|158432430|gb|EDP10719.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
          Length = 874

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/342 (19%), Positives = 132/342 (38%), Gaps = 9/342 (2%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTFDW 216
           Q  EEE   F    ++     + E+  ++ +  +      I        +          
Sbjct: 375 QGNEEERINFYPKRFEKTFQQWLENIEDWCISRQLWWGHRIPAWYHKDSNEIYVGMEEPK 434

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
            I+     + ++  W  +     +T G+ +       +++P D+ V G DI+ F    + 
Sbjct: 435 DIENWVQDEDVLDTWFSSALWPFSTLGWPEQTA-DLERYFPNDVLVTGYDIIFFWVARMA 493

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +       + P    +        +G K+SKSLGN +DP++VI + GVD+LR+FL     
Sbjct: 494 FQTRYCMKSRPFKDVLIHGLVRDSQGRKMSKSLGNGVDPMDVIAKSGVDSLRFFLTTNST 553

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G+D  Y ++ ++   N    N I N     +    +D           +  D+ IL   
Sbjct: 554 PGQDLRYSEEKVEASAN--FINKIWNAARFVLMHTKEDMCMSDVDLTHASMIDKWILRRF 611

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + VL+ +  NM+         ++ S V +     Y +  K          R ++V    V
Sbjct: 612 NEVLENVTANMEKYEYALVGNELYSFVWDDFCSWYIELSKAGLFSDDETTRHASV-STLV 670

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            V+  +  +L  F+P +  +I+  +    E+   +    +++
Sbjct: 671 TVLSGILRMLHPFMPFVTEEIYLAIPHDYESINLEVWPSKVE 712



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 66/176 (37%), Gaps = 19/176 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +         + H+GHA++  + D++AR+ R+ G D+L+  G D  G      
Sbjct: 33  KSKDPFCVVIPPPNVTGKLHLGHAWDTTLQDIVARYKRMRGFDMLWLPGMDHAGIATQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     + ++ +   R     + +S D      T ++   
Sbjct: 93  VDERLKNEGISRYDIGRENFLKRAWEWKEEYASTIRKQWAKMGLSLDYSRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + ++G IY+G     W      A  N + ++K  +G  Y  ++  V+
Sbjct: 153 QAVRKVFVDLYNEGLIYQGERIINWDPQAKTALSNIEVIHKEVEGAMYYFKYKIVE 208


>gi|121602503|ref|YP_988986.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|121602738|ref|YP_988955.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614680|gb|ABM45281.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614915|gb|ABM45516.1| valyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 908

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 141/377 (37%), Gaps = 10/377 (2%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +       +        L D+ Y N  E+ K A    +  + + V    ++ YF  +  
Sbjct: 364 HLHTVPHGDRSGVPIEPLLTDQWYVNAAELAKPAIEAVHQGKMHFVPDSWKKTYFNWMEN 423

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
            Q   +S        I      +  I   K+  + L+ +   +   +K+  D   ++  W
Sbjct: 424 IQPWCISRQLWWGHQIPAWYGPDGTIFVEKNEEEALASALSYYGTEVKLTRDQD-VLDTW 482

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
             +     +T G+    +     F+P  L V G DI+ F    +          +P P  
Sbjct: 483 FSSALWPFSTLGWPHKTN-ELTTFYPTSLSVTGFDIIFFWVARMMMMGIHFMGEVPFPIV 541

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                     G K+SKS GN++DP+E+I++   DALR+ L    A G+D   D   +   
Sbjct: 542 YVHALVRDAHGAKMSKSKGNIVDPLELIDQYSADALRFTLAIMAAQGRDVKLDPSRIAG- 600

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
              + A  + N  +R   +    +D            +  IL+  S+ +  +  +++N  
Sbjct: 601 -YRNFATKLWN-AARFAEINNVKHDLAFKPEQTKLAFNRWILTELSKTVSIVTSSIENYK 658

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A + +   +     D Y +  KP   +  + D        T  V+ ++  LL  F+P
Sbjct: 659 FNEAASALYRFIWNALCDWYLEFLKP-IFQGGDEDSKKEAQACTAWVLDEVYKLLHPFMP 717

Query: 468 KLANKIFDILFVADENR 484
            +  +++ +  +    R
Sbjct: 718 HITEELWSLTAMPGTKR 734



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 25/172 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNATIQDIMVRFQRMHGKNVLWQPGMDHAGIATQMVVERQLA 98

Query: 68  TTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +    Q                      S   R +    D S + F  T ++   +  
Sbjct: 99  ERQEPTRQEMGREKFIERVWKWRHEAGNVISSQLRRLGVSCDWSRERF--TMDEGLSEAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           R ++ ++  +G IYK      +  +     +D EV       +      P++
Sbjct: 157 REVFVRLYKQGLIYKDKRLVNWDPKLLTAISDLEVESKEIQGHLWHFRYPLE 208


>gi|189485558|ref|YP_001956499.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287517|dbj|BAG14038.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 883

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 148/384 (38%), Gaps = 26/384 (6%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYN-----DDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
            +   G  Y+        + ++ + N     +  V    DG+       P  W +    +
Sbjct: 335 YVHSVGKCYRCSAKIESLMSEQWFLNVKKMSEKAVEAVNDGRMSFY---PQSWKKPYVLW 391

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
                        +  H   +          +           +  +   G K   D   
Sbjct: 392 LENLKDWCLSRQIWWGHKIPVYYCVDEKGKRTNCSPVASLDRPAVCSCCKGRKFIQDED- 450

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIGKDILRFHAIYWPAFLLSANLP 285
           ++  W  +    ++   + ++ +    ++ +PA +   G +I+      W A ++   L 
Sbjct: 451 VLDTWFSSALWPMSIFDWGEDENNEDLRYFYPASVLATGHEIIY----LWVARMVQFGLE 506

Query: 286 LPK-----KVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
             K      VF HG +  K G+K+SKSLGNV++P +++++ G DALR+ L +  A G+D 
Sbjct: 507 FMKDVPYSNVFIHGIVRDKNGKKMSKSLGNVVNPGDIMDKYGTDALRFALAQVAAPGRDM 566

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
              ++      N   AN I N  SR + +  +D   +      F  +DE I++  +    
Sbjct: 567 QISEESFLAARN--FANKIWN-ASRFIIINSQDISELDKNIQTFELADEWIIAEFAATAS 623

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +++ + ++  I  A  ++         D Y +  K   +   + +    VL + V V++ 
Sbjct: 624 KVKADYESYNIDSAAREIYDFFWTKYCDWYVELSK-IRIMSADLNVKKRVLSILVYVLKS 682

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
              L+   +P +A +I+ IL   +
Sbjct: 683 TLQLVSPVMPFIAEEIWRILNKGE 706



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            R+    +  I   N     H+GHA  + + D++ RF +L G + L+  GTD  G     
Sbjct: 31  NRKPF--TMFIPPANITGSLHMGHALNVTLQDIIIRFKKLKGYNTLWVPGTDHGGIATQN 88

Query: 61  AAQNAGVTT----------------KVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRH 102
             +                      + +  +      D        + +D    T ++  
Sbjct: 89  VVEKLLKKEGRTKYDLGRDKFLEKMQQWKTETGSAILDQLKKLGCGLDWDRLAFTMDESR 148

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               +  + K+ +KG IY+G     +  R     +D EV    +         P++   E
Sbjct: 149 SKAVKKAFIKLFNKGLIYRGKRLVNWCSRCATALSDIEVEYEDERSNLWYIKYPLRDCGE 208


>gi|289758580|ref|ZP_06517958.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85]
 gi|289714144|gb|EFD78156.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T85]
          Length = 699

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 174 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 231

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 232 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 290

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 291 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 350

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 351 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 408

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 409 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 466

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 467 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 520

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 521 LTGRE---SLVSADWPEPSGISV 540


>gi|307109913|gb|EFN58150.1| hypothetical protein CHLNCDRAFT_141931 [Chlorella variabilis]
          Length = 1150

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/585 (14%), Positives = 164/585 (28%), Gaps = 129/585 (22%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK----- 70
                HIGHA    I D + R+ R+ G + L+  GTD  G       +      +     
Sbjct: 376 VTGSLHIGHALTNAIEDTVVRWRRMSGYNTLWVPGTDHAGIATQTVVEKKIAREQGKTRH 435

Query: 71  ------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDK 116
                        +V +           +   + +D    T ++      +    ++ + 
Sbjct: 436 DIGREGFLAEVWEWVGEYGDRICSQLRRMGSSVDWDRKTFTMDENLSAAVKEADNRLVNW 495

Query: 117 GDIYKGCY------SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
               +                 E       +         +   + ++ + +  ++    
Sbjct: 496 CCKLRTAVSDIEARVTVVEYLKERGLFRGTLDNPMRLGLCSRSKDVIEPVLKPQWWVNCQ 555

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG------------- 217
                  +        I+P E       +++  ++D  +SR+   WG             
Sbjct: 556 QMAADACAVVRDGRLEIIPREFEATWFRWME-NIRDWCVSRQ-LWWGHRIPAYYVALEDE 613

Query: 218 ---------------------------------------IKIPDDPQYIMYVWIDALTNY 238
                                                  +K+  D   ++  W  +    
Sbjct: 614 AEEQRGNPGAPSEHMDRWVVGRDEGEALAAARHRFPGRPVKVVQDED-VLDTWFSSGLFP 672

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
            +   +        A+F+P  L   G DIL F    +      L+  +P  +        
Sbjct: 673 FSVFQWPQQTP-ELARFYPTSLLETGHDILFFWVARMVMMGMKLTGEVPFKQVFLHSLVR 731

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
              G K+SKSLGNVIDPI VIE                                     E
Sbjct: 732 DAHGRKMSKSLGNVIDPINVIEGITLDGLHQTLLGGNLDPKEVEKAASGQRADFPDGIEE 791

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
            G DALR+ LV   + G+D   D   +         N + N +  ++  +  ++      
Sbjct: 792 CGTDALRFALVAYTSQGRDINLDIKRVVS--YRHWCNKLWNAIRFAMINLGSEFQPSEAL 849

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP--- 433
              +F  +   ILS  +  +      M+      A + V +       D + +  KP   
Sbjct: 850 DVPSFPFASRWILSKLNGAVGTTIRGMEAYEFSIATSAVYNFWQYELCDVFIELMKPVMA 909

Query: 434 -WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +  +                +     LL  F+P +  +++  L
Sbjct: 910 LDDAAEGAAAAKQATRDTLWVCLEAGLRLLHPFMPFVTEELWQRL 954


>gi|108800524|ref|YP_640721.1| valyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869663|ref|YP_939615.1| valyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108770943|gb|ABG09665.1| valyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695752|gb|ABL92825.1| valyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 883

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 124/361 (34%), Gaps = 52/361 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++ +          +    I P        ++V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVKVESLAKAAGDAVRNGHTVIHPPSLEPRWFAWVD-NMHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D      A
Sbjct: 419 WGHRIPIWHGPNGETVCVGPDETPPDGWEQDPDVLDTWFSSALWPFSTMGWPDRTP-ELA 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                 A++P              
Sbjct: 478 KFYPTTVLVTGYDILFFWVARMMMFGTFVADDPALTLDGQRTADVPFENVFLHGLIRDEH 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN IDP++ +E  G DALR+ L R  + G D    +D    R + + A  + 
Sbjct: 538 GRKMSKSRGNGIDPLDWVETFGADALRFTLARGASPGGDLAIGEDH--ARASRNFATKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M        +P   A T++D  IL     V  E+    +     RA   +  
Sbjct: 596 N-ATRFALMNGAA-PAPLPDVAALTDADRWILGRLEEVRAEVDAAFEAYEFSRACESLYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L K    +  S    V   V+  L  LL   +P +   ++  
Sbjct: 654 FAWDEFCDWYVE------LAKVQLGEGVSHTTAVLAAVLDTLLKLLHPVMPFVTEVLWKT 707

Query: 477 L 477
           L
Sbjct: 708 L 708



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 41  SDKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRRKRMQGFEVLWLPGMDHAGIATQTL 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T +  
Sbjct: 101 VEKQLAVDGKTKEDFGRELFIDKVWDWKRESGGTIGAQMRRLGDGVDWSRDRF--TMDDG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 159 LSRAVRTIFKKLYDAGLIYQAERLVNWSPVLETAISDLEVKY 200


>gi|302551406|ref|ZP_07303748.1| valyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302469024|gb|EFL32117.1| valyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 880

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 131/364 (35%), Gaps = 39/364 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY------------------------IMYVWIDALTNYLTTT 242
           +SR+   WG  I +   P                          ++  W  +     +T 
Sbjct: 413 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEQPPGTEAEGWRQDTDVLDTWFSSGLWPFSTL 471

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHK 299
           G+ +  + S AKF+P  + V G DIL F     + +  + +    P              
Sbjct: 472 GWPEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQF 530

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN ++P++ +++ G DALR+ L R    G D    +D ++   N   AN I 
Sbjct: 531 GKKMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIW 588

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M     DG +P P   + +D  ILS  + V+ E+    ++    +    +  
Sbjct: 589 N-ATRFAMMNGATVDGPLPDPSKMSATDRWILSRLNTVVAEVDAFYEDFQFAKLSDALFH 647

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   D Y +  K     +   + A     V  EV+     LL   VP +   ++  L
Sbjct: 648 FAWDEVFDWYVELSK--TTFQAGGEAAEVSKRVLGEVLDVTLKLLHPVVPFVTETLWTTL 705

Query: 478 FVAD 481
              +
Sbjct: 706 TGGE 709



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGHETLWQPGMDHAGIATQNV 104

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELAKEGKSRHDLGREAFVERVWQWKGESGGQISGQMRRLGDGVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSQAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 207


>gi|215446695|ref|ZP_03433447.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 714

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 189 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 246

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 247 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 305

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 306 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 365

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 366 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 423

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 424 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 481

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 482 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 535

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 536 LTGRE---SLVSADWPEPSGISV 555


>gi|325971491|ref|YP_004247682.1| valyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026729|gb|ADY13488.1| Valyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 882

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 138/378 (36%), Gaps = 39/378 (10%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E  +   EV    D  +    +  ++      +F  +    +K L  +        P  
Sbjct: 329 KEQGFLVKEVAHNHDVGHCYRCNTIIEPYLSNQWFVSMKGMAEKALQAWRDEKVVFYPKR 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQYIM------------------- 228
             N   +     + D  +SR+   WG +I      D + ++                   
Sbjct: 389 WENT-YTHWLENIHDWCISRQ-LWWGHRIPVWECQDCKQVIVARQDPTECPNCHSANLVQ 446

Query: 229 -----YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
                  W  +     +T G+        A ++P    V   DI+ F    +   +  L 
Sbjct: 447 ETDVLDTWFSSWLWPFSTLGWPQKTA-DLATYFPTSTLVTAYDIIFFWVSRMIMASLELM 505

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P      +      +G K+SKSLGN IDP+EVI++ G DA+++ L      G+D   
Sbjct: 506 GEVPFRDIYITGLVRDKQGRKMSKSLGNGIDPLEVIDQYGADAMKFTLSYMATQGQDILI 565

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D D    R+ +  AN + N  +R + M L+  + +  +    T  D  I +  +   Q +
Sbjct: 566 DMDSF--RLGSRFANKVWN-AARFLLMNLEGVNLIPVSMVTLTTMDTWIYNQLNVAAQNV 622

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  ++N   +     V         D Y ++ K   L   +P      + + ++++ +  
Sbjct: 623 QIALENYKFNDGAQAVYDFFWNDFCDWYVESAK-RGLYSDDPAVKERQVSLLLDLLAESM 681

Query: 460 ILLQAFVPKLANKIFDIL 477
            L+  F   ++ +I+  L
Sbjct: 682 RLMHPFASFISEEIYQKL 699



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    +           H+GHA    + D+L R++R+ G   L+  GTD  G       
Sbjct: 35  EQSPFTVVMPPPNVTGILHMGHALNNSLQDILTRYYRMTGRPTLWVPGTDHAGIATQNIV 94

Query: 63  QNAGVTT------------KVFVDQNSRNF----RDMADVLDIS--YDDFIRTTEKRHHD 104
           +                       Q         +     +  S  +D    T ++    
Sbjct: 95  ERQLAKEGLRRQDLGRDRFIERTWQVKEKHHGIIKQQLQKIGSSCDWDHERFTMDEGLSQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R  +  + ++G IYKG Y   Y  +      DDEV  
Sbjct: 155 AVRESFVTLYERGLIYKGEYLVNYCPKCGTALADDEVEY 193


>gi|330507469|ref|YP_004383897.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928277|gb|AEB68079.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 1053

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/386 (18%), Positives = 138/386 (35%), Gaps = 63/386 (16%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ ++    +F R+S  +DK+L           P    +   +   S  +D  
Sbjct: 396 HCWRCKTPIIFIATSQWFLRISDLRDKMLDEISR--VKWYPEWAGSARFADWISNARDWC 453

Query: 209 LSRKTFDWGIKI----PDDPQY-------------------------------------- 226
           +SR+   WGI +      D  +                                      
Sbjct: 454 ISRQR-YWGIPLPIWTCPDCGHMEVIGTASELEERSGKKIADLHRPDVDAIVLDCPCGGK 512

Query: 227 ------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 +  VW D+      T  +  + +    ++WPAD    G D     F++    + 
Sbjct: 513 MLRSPDVFDVWFDSAVASWATLRFPSHEE-EFGEWWPADFITEGHDQTRGWFYSQLGASM 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P    +     +  +G K+SKS+GN++ P EV+E  G D LR++++   A  +D
Sbjct: 572 VSFGRAPYKSVLMHGFTLDDQGRKMSKSIGNIVQPEEVVERFGADILRFYVLGANAPWED 631

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT----PGAFTESDESILSV 393
             +  + ++    + + N   N    ++  M+L D+D           +    D  ILS 
Sbjct: 632 LHFSWEAVEN--TSRMINIFWNAYRFALPYMVLDDFDLKRADLDLYKSSLRPEDRWILSR 689

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + + +EI   M+   +HR +  +   +       Y    +P    + +           
Sbjct: 690 VNSLAEEITAEMEGYQLHRIVRSISDFILEDLSRWYIQLVRPRTWIEQDDPDKLAAYATI 749

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
            EV+ +LA L+  F P +A  I+  L
Sbjct: 750 YEVLTKLARLMAPFTPFIAESIYQNL 775



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 19/176 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K +      Y   + H+G A+  +I D + R+  ++G +V    G D HG  I    + 
Sbjct: 39  KKFFFVDGPPYTTGRIHLGTAWNKVIKDAVLRYRSMNGFEVKDRAGWDMHGLPIEVKVEE 98

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
           +                     K F  +   +      +L   + +DD   T +  + + 
Sbjct: 99  SFGFRNKKDIEAYGVDKFIQRCKEFALRQKDDMTAQFKILGAWMDWDDPYMTLKNEYLEA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                KK  +   + +G     +  R +    D EV    +  Y      PV   E
Sbjct: 159 AWWTLKKAHEHNLLERGSRVVNWCPRCQTAIADSEVEYWDETDYSIYVKFPVIGEE 214


>gi|116251795|ref|YP_767633.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256443|emb|CAK07527.1| putative valyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 947

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/360 (20%), Positives = 137/360 (38%), Gaps = 38/360 (10%)

Query: 132 DEAYYNDDEVYKGADGQYY-NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           D+ YY   E  +           H    W   +G  F     ++ L +  + +     P+
Sbjct: 427 DKTYYEWMENIQPWCISRQLWWGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYLSHEGPM 486

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           +   E +              + F  G  +  D   ++  W  +     +T G+ D    
Sbjct: 487 KAYVEDLL-------------ENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPDETP- 531

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK 299
             A+++P ++ V G DI+ F    W A ++   L   K            V+ H  +  K
Sbjct: 532 ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHFMKDEDGEPVEPFQTVYVHALVRDK 587

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +      +    +
Sbjct: 588 NGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKL 645

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M     D       A    +  IL+  +R  +++ E ++    + A   + 
Sbjct: 646 WN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTELARTERDVTEALEAFRFNDAAGALY 704

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V     D Y +  KP      +    +     +  ++ ++  LL  F+P +  +++  
Sbjct: 705 RFVWNEVCDWYLELLKP-VFNGEDEGAKAEAQACSAYILEEIYKLLHPFMPFMTEELWAH 763



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 23/183 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRRDMGREAFIDKVWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++  +  +G IYK      +  +     +D EV +            P++     
Sbjct: 154 KAVLEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDIEVEQHEVKGNLWHLRYPLEKGVTY 213

Query: 164 GYF 166
            Y 
Sbjct: 214 QYP 216


>gi|126436140|ref|YP_001071831.1| valyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126235940|gb|ABN99340.1| valyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 883

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 124/361 (34%), Gaps = 52/361 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++ +          +    I P        ++V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVKVESLAKAAGDAVRNGHTVIHPPSLEPRWFAWVD-NMHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D      A
Sbjct: 419 WGHRIPIWHGPNGETVCVGPDETPPDGWEQDPDVLDTWFSSALWPFSTMGWPDRTP-ELA 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS--------------ANLPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                 A++P              
Sbjct: 478 KFYPTTVLVTGYDILFFWVARMMMFGTFVADDPALTLDGQRTADVPFENVFLHGLIRDEH 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN IDP++ +E  G DALR+ L R  + G D    +D    R + + A  + 
Sbjct: 538 GRKMSKSRGNGIDPLDWVETFGADALRFTLARGASPGGDLAIGEDH--ARASRNFATKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M        +P   A T++D  IL     V  E+    +     RA   +  
Sbjct: 596 N-ATRFALMNGAA-PAPLPDVAALTDADRWILGRLEEVRAEVDAAFEAYEFSRACESLYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L K    +  S    V   V+  L  LL   +P +   ++  
Sbjct: 654 FAWDEFCDWYVE------LAKVQLGEGVSHTTAVLAAVLDTLLKLLHPVMPFVTEVLWKT 707

Query: 477 L 477
           L
Sbjct: 708 L 708



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 41  SDKPAYSIVLPPPNVTGSLHMGHALDHTLMDALTRRKRMQGFEVLWLPGMDHAGIATQTL 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T +  
Sbjct: 101 VEKQLAVDGKTKEDFGRELFIDKVWDWKRESGGTIGAQMRRLGDGVDWSRDRF--TMDDG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 159 LSRAVRTIFKKLYDAGLIYQAERLVNWSPVLETAISDLEVKY 200


>gi|20804107|emb|CAD31310.1| HYPOTHETICAL, FUSION OF HYPOTHETICAL PROTEIN & ONE WITH PARTIAL
           SIMILARITY TO MET-TRNA SYNTHETASES [Mesorhizobium loti
           R7A]
          Length = 684

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 100/528 (18%), Positives = 176/528 (33%), Gaps = 36/528 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  +++ +    PN   H+GH       ADV  RF R+ G++    TG+D++   +A  A
Sbjct: 137 RGPIFVFSTPPTPNGDLHLGHLSGPYFGADVYTRFLRMKGVEAYHLTGSDDYQSYVATRA 196

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYK 121
                T        +   R    +LD     F+ T  +  + +     ++ +     +  
Sbjct: 197 DADQSTPAKVARNYADEIRATLALLDCEVHSFLPTLGDSAYAEFQAACFRSLLSSTAVDL 256

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +      Y  + +V         +A  N  +          L A + +  +   
Sbjct: 257 RRSPALFDAVTGDYLYEPDVIGLCPYCGSSAGGNICEECGAPNLCHDLGAVRSRHSAEAP 316

Query: 182 SHPEFILPIERRNEVISFVKSGL------------KDLSLSRKTF--------DWGIKIP 221
                  P          +   L                  R  F        DWG+   
Sbjct: 317 VVGSVRRPELALERCYDTIDRHLRASGAPVRIMDLFARLRQRGDFSVPITHPSDWGLPAE 376

Query: 222 DDPQYIMYVWIDALTNYLTTTG------YLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
             P  +++VW +    +L            D      +K W   +H  G D   +HA+ +
Sbjct: 377 GLPGQVIWVWPEMAFGFLYNIQALATSLGRDWNAALPSKDWQI-VHFFGFDNSFYHALLY 435

Query: 276 PAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA           ++  H   F L  G+K S S G+ +   EV+    VD +R  L    
Sbjct: 436 PALYAEVFSHWTPRIRYHVNEFYLLDGQKFSTSRGHAVWGKEVLGPKTVDVVRLHLGLTR 495

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G+   +  D L++  N        N +      I +D+ G +P  G +  +D +  + 
Sbjct: 496 PEGERTNFTLDALRRTKNEVFQGIWLNWLDALHREIKQDFGGCVPDAGDWAPADRAFFAR 555

Query: 394 CSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                  +          + RA AQ    VS+   Y  AQ     ++  P R  T L + 
Sbjct: 556 IEIHRAAMERAYSDDGFSVRRAAAQACDFVSDCVVYRQAQDYEAARRLYPARTRTSLALQ 615

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFM 498
                 LA  L   +P+ A+ +   +  V+ E   + +  +RL PG  
Sbjct: 616 TTAAAILAQTLAPLMPRFASTLARAIDGVSTE--TWPTSVRRLAPGTT 661


>gi|156740388|ref|YP_001430517.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231716|gb|ABU56499.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 907

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 130/350 (37%), Gaps = 37/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  E +F R     +  L+        I+P  R  +V       ++D  +SR+   W
Sbjct: 376 VEPLLSEQWFVRAGPLAELALAAVREGRTRIVPE-RFEKVFFHWLENIQDWCISRQ-LWW 433

Query: 217 G--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           G  I +   P                        ++  W  +     +T G+ D+     
Sbjct: 434 GHRIPVWYTPDGQMIVPGPDDPDPQGQGLVQDPDVLDTWFSSALWPFSTLGWPDDTP-DM 492

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +F+P  +   G DIL F    +      L+   P              G K+SK+ GNV
Sbjct: 493 RRFYPTSVMETGYDILFFWVARMMMMGCYLTGEPPFHTVYLHGLVRDKDGRKMSKTYGNV 552

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P++VI++ G DALR+ L    + G+D   + + ++   N   AN + N+    +S + 
Sbjct: 553 VNPLDVIDQYGADALRFTLATSSSPGQDLNLNPERIESARN--FANKLWNMTRFVLSKLD 610

Query: 371 KD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
            D        P   T +D  ILS   R+  ++   M+      A   +   +     D Y
Sbjct: 611 DDSLREARRDPQPATLADRWILSRYHRLALDVDRLMRAYNFGEAGRSIQEFLWSEFADWY 670

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   ++        +   +   V+     +L  F+P +  + +  L
Sbjct: 671 VEVAK---VQFEQESLRPSTRVMLFTVLEGALRMLHPFMPFVTEEAWQYL 717



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 59/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R    +S        + H+GHA  + I DV+ R+HR+ G   L+  GTD  G      
Sbjct: 41  SDRPPFVVSMPPPNVTGELHMGHAMFVTIEDVMVRWHRMLGEPTLWLPGTDHAGIATQLQ 100

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    +                T  + ++           L  S D      T +    
Sbjct: 101 VERLLQSEGLSRQQVGREEFLRRTWEWKEKYGGEITRQLRRLGASCDWTRERFTLDPMLS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R  +K++ D G IY+G     +S   +   +D EV       Y      P+
Sbjct: 161 RAVRAAFKRLYDDGLIYRGYRLVNWSPNLQTAVSDLEVEYEERDMYLYHVRYPI 214


>gi|94986050|ref|YP_605414.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94556331|gb|ABF46245.1| valyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 925

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 81/389 (20%), Positives = 146/389 (37%), Gaps = 75/389 (19%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F  +    +++L+  ++    I P  R  +V      G++D ++SR+   
Sbjct: 377 PVEPIVSTQWFVHMKPLAERVLAGLDAGEIHITPE-RYTKVNRDWLLGIRDWNISRQ-LW 434

Query: 216 WG--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTG 243
           WG  I    D +  +YV                              W  +     +T G
Sbjct: 435 WGHQIPAWYDEEGNVYVPDLENPDLDCDQDPRYAHLNLRRDPDVFDTWFSSNLWPFSTLG 494

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D       KF+P  + V G DIL F    +    + L+   P    +    ++  KG+
Sbjct: 495 WPDTDSEDYRKFYPTQVLVTGYDILFFWVARMEMAGYALTGEAPFSTVMLHGLYLDAKGQ 554

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP+E+ +E GVDA R+        G+D  +D    ++    + AN + N 
Sbjct: 555 KMSKSKGNGIDPLELFDEYGVDACRFAFTSLATGGQDIRHDPRRFEQ--GRNFANKLWNA 612

Query: 362 VSRSVSMILK-------------------DYDGMIP-----------TPGAFTESDESIL 391
              ++  + +                   +     P           T    T +D  I+
Sbjct: 613 ARFALLRLAEAAPKLSGEDELTRYVRSAVNAGEAEPLRSREVLARLRTRADLTLADRWII 672

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + V  E+   +    I  A+  + S   +   D Y +A KP  L        +T+  
Sbjct: 673 SRLNAVTAEVSAQLDAFDIGAAIRTLYSFTWDEFCDWYIEAAKP-ALSSGQLGTLATLKA 731

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF 478
               V+  +  LL  F+P + ++++  L 
Sbjct: 732 ----VLEHILKLLHPFMPFVTSELYAALG 756



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ R+ G + L+  GTD  G      
Sbjct: 49  SGKPPFTIVIPPPNVTGNLHLGHALDNTLIDTLIRYKRMQGFEALYLPGTDHAGISTQVV 108

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        +  Q+     +    L +S D      T ++   
Sbjct: 109 VERQLKELGQTRFDLGREAFLERVWAWKAQSGGQILNQLTRLGVSADWTRERFTMDEGLS 168

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + ++  +G  Y+G     +    +   +D E+
Sbjct: 169 KAVRYQFIRLYHEGLAYRGERIVNWDPAAQTTLSDLEI 206


>gi|167969772|ref|ZP_02552049.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
          Length = 808

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 283 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 340

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 341 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 399

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 400 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 459

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 460 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 517

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 518 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 575

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 576 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 629

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 630 LTGRE---SLVSADWPEPSGISV 649



 Score = 40.5 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 22/125 (17%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQN--------------AGVTTKVFVDQ------NSRN 79
           + G +VL+  GTD  G       +                    KV+  +          
Sbjct: 1   MQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQ 60

Query: 80  FRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
            R + D +D S D F  T ++      R ++K++ D G IY+      +S   +   +D 
Sbjct: 61  MRRLGDGVDWSRDRF--TMDEGLSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDL 118

Query: 140 EVYKG 144
           EV   
Sbjct: 119 EVNYR 123


>gi|262201990|ref|YP_003273198.1| valyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085337|gb|ACY21305.1| valyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 884

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 140/414 (33%), Gaps = 72/414 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++ +          +    I P        ++V   + D  +SR+   
Sbjct: 362 PIEPRLSMQWWVKVESLAKASGDAVRAGDTVIHPTSMEPRFFAWVDD-MHDWCISRQ-LW 419

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 420 WGHRIPIWYGPDGEIVCTGPDEQAPDGYVQETDVLDTWFSSGLWPFSTLGWPDQTA-DLE 478

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILHKGEKISK 305
           KF+P  + V G DIL F       F           A +P              G K+SK
Sbjct: 479 KFYPTSVLVTGYDILFFWVARMMMFGTYVGNDLGPDAKVPFGNLFLHGLVRDEHGRKMSK 538

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN IDP++ ++  G DALR+ L R    G D    +D      + + A  + N  ++ 
Sbjct: 539 SKGNGIDPLDWVQRFGADALRFTLARGANPGSDISVGEDH--ASSSRNFATKLFN-ATKF 595

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             M       + P+    T  D  IL     VL E+    ++    +A   +     +  
Sbjct: 596 ALMNGARVGDL-PSADELTAVDRWILGRLDEVLAEVDAGFESYEFSKACESLYHFAWDEV 654

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL------ 477
            D Y +  K  +  + +  R+ T   V   V+  L   L   +P +   ++  L      
Sbjct: 655 CDWYLELAKV-QFAEGDEKRSETTRLVLGAVLDPLLRALSPVMPFVTEVLWKALTGGPSL 713

Query: 478 ----------FVADEN---------------RCFQSLDQRLKPGFMLHKTFDPI 506
                      V DE                R F+S DQ L+PG  +  TF+ +
Sbjct: 714 VVADWPAVSARVGDEQATAVVDDLQRLITEIRRFRS-DQGLQPGQRVAATFEQL 766



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I       N   H+GHAYE ++ D L+R  R+ G +VL+  G D     +   
Sbjct: 42  SDKPAFSIVIPPPNVNGSLHMGHAYEHVLMDALSRRRRMQGYEVLWLPGMDHAAIAMQTM 101

Query: 62  AQNAGVTT--------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                                     R + D +D S + F  T ++ 
Sbjct: 102 VERKLADEGKTRDDLGREAFIERVWAEKAEIGGNIGEQMRRLGDGVDWSRERF--TMDEG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++KK+ D G IY+      +S   +   +D EV  
Sbjct: 160 LSRAVQTVFKKMFDDGLIYRAERLVNWSPVLKTAVSDIEVNY 201


>gi|327399172|ref|YP_004340041.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181801|gb|AEA33982.1| Valyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 873

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 81/422 (19%), Positives = 162/422 (38%), Gaps = 62/422 (14%)

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           DD+ + T++  H              D ++        L  + +  +    K A GQ Y 
Sbjct: 295 DDYGKMTDEALH----------FKGMDRFECRSKLVAELEGKGFIKNVAEIKHAVGQCYR 344

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
             H  ++    E +F +     +  +   ++     +P     +        +KD  +SR
Sbjct: 345 -CHTTIEPYVSEQWFVKTKPLAEPAIEAVKNGDTRFVPKNWE-KTYFEWMYNIKDWCISR 402

Query: 212 KTFDWGIKIPD----------------------------DPQYIMYVWIDALTNYLTTTG 243
           +   WG +IP                               + ++  W  +    ++T G
Sbjct: 403 Q-LWWGHRIPVWKCEDCGKYTVSEDEPKACEHCGSDKLVQEEDVLDTWFSSALWPMSTLG 461

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH----- 298
           + +  D  K +F+P  L V G DI+ F    W A ++   L   K V      +H     
Sbjct: 462 WPNQTDDLK-RFYPTSLLVTGFDIIFF----WVARMMMMGLHFMKDVPFRDVYIHALVRD 516

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SK+ GNVIDP+EV+E+ G D++R+ L    A G+D    +D ++        N 
Sbjct: 517 QYGQKMSKTKGNVIDPLEVVEKYGADSMRFTLAILAAQGRDIKLSEDKIEG--YKRFMNK 574

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N   R + +  +  +     P   + +   I S  ++ ++++ +++     + A + +
Sbjct: 575 IWN-AYRFIKINTEGMELKE-KPKKLSPASIWIKSRLAKTIRKVEQSLSEYKFNEAASAI 632

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  K       + + + ++ +  +EV      LL  F P +  +++ 
Sbjct: 633 YQFIWHEFCDYYIEMSK----VHMDDEFSYSIKFTLLEVFEATLRLLHPFTPFITEELWQ 688

Query: 476 IL 477
            L
Sbjct: 689 KL 690



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           HIGHA    + D++ R+ R+ G +VL+  GTD  G      
Sbjct: 30  EGKENFSIVIPPPNVTGALHIGHALNGTLQDIMVRYKRMKGYNVLWVPGTDHAGIATQNM 89

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +    +                   + ++      +    L +S D     F  T +++
Sbjct: 90  VEKDLASKGIKKEDLGREKFVEKVWEWKEKYGNRIINQIKRLGLSCDWSRLRF--TMDEQ 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                R ++ ++  +G IYK  Y   +  R     +D EV    +
Sbjct: 148 LSKAVRKVFVQLYKEGLIYKDKYIINWCPRCHTALSDLEVEHKDE 192


>gi|317152459|ref|YP_004120507.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942710|gb|ADU61761.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 888

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 138/394 (35%), Gaps = 27/394 (6%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
                G  Y+        +  + + +   + + A            +   +  Y +  + 
Sbjct: 341 HDHSVGACYRCKSVIEPHVSTQWFVSMKPLAEKARAAVPAQTKIHPEHWTKTYYEWLDNI 400

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQYIMY 229
               +                     +  K G   +S++  +     G +     + ++ 
Sbjct: 401 RDWCISRQIWWGHRIPA--------WTCEKCGALTVSITDPSACESCGSRNIIQDEDVLD 452

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W  +     +T G+ D      A+++P    V G DIL F    W A ++   L   ++
Sbjct: 453 TWFSSALWPFSTLGWPDKTP-ELARYYPTSCLVTGFDILFF----WVARMMMMGLQFMER 507

Query: 290 VFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           V  H   +       KG+K+SKS GNVIDP+++IE+ G DALR+ L    A G+D    +
Sbjct: 508 VPFHDVYIHALVRDEKGKKMSKSTGNVIDPLDMIEKYGADALRFTLTSFAAMGRDIKLSE 567

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             ++        N I N  +R   M L D    +P     + +D  IL     V   + E
Sbjct: 568 QRIEG--YKHFMNKIWN-AARFAMMNLPDEIPAVPLDQTSSLADTWILHRLEEVKTTVAE 624

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
                  +     +   +     D Y +  KP  L   +    +        V+ +  +L
Sbjct: 625 ATAAYRFNEVAQTLYKFIWSEFCDWYLEMIKP-ALYGEDEAAKAATQKALWTVLSETMVL 683

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           L    P ++ +I+ +L     +   + +     P
Sbjct: 684 LHPVAPFISQEIWSVLPRPAGDDRSEDIATLPFP 717



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D+L RFHR  G +VL+  GTD  G       + 
Sbjct: 38  DPYSIVIPPPNVTGVLHMGHALNLTLQDILCRFHRQQGRNVLWVPGTDHAGIATQNVVER 97

Query: 65  AGVTT---------KVFVDQNSRNFRDMADVL---------DISYDDFIRTTEKRHHDTC 106
                         + F+++     ++  D +          + +     T + +     
Sbjct: 98  QLKEEGKSRHDLGREKFIERVWEWKQEKGDRILGQIRRMGASVDWTRECFTFDDQRARAV 157

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           R ++ ++  +G IYKG Y   +  R      DDEV       +      P+
Sbjct: 158 REVFVELYRQGLIYKGDYIINWCNRCHTALADDEVEHEPKPGHLYHIQYPL 208


>gi|159468872|ref|XP_001692598.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158278311|gb|EDP04076.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 962

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 128/408 (31%), Gaps = 65/408 (15%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                    V+ +  E +F R+    +  L+        I+P  R  +  +     +KD 
Sbjct: 414 PRCQRSGGVVEPLVSEQWFVRMQPLAEPALAAVAKGDITIMPE-RFAKTYNNWLENIKDW 472

Query: 208 SLSRKTFDWG--IKIPD------------------------------------------- 222
            +SR+   WG  I +                                             
Sbjct: 473 CISRQ-LWWGHRIPVWYVFPSAEAAAASLEGRSEHYVVARSAEEAQRLAEAKHGAGVVLK 531

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ +       KF+P  +   G DIL F    +       
Sbjct: 532 QEEDVLDTWFSSGLWPFSTLGWPNTQAPDFQKFYPTQVLETGHDILFFWVARMIMMGIEF 591

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P             KG K+SKSLGNVIDP++ I + G DALR+ L    A G+D  
Sbjct: 592 TGKAPFNTVYLHGLVRDEKGRKMSKSLGNVIDPLDTIGQYGTDALRFTLATGTAVGQDLN 651

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----------PTPGAFTESDES 389
              + +    N    N + N     +  + +  +                      ++  
Sbjct: 652 LSSERVTAARN--FTNKLWNAGKFVLFNLAQVSEAEWESLRGVSLSSPADLQRLPLTERW 709

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           I+S+  + + E+ E       + A     + + +   D   +A K       +    +  
Sbjct: 710 IISLLHKTVDEVSERYDKYDYNTAGIAAYNFLWDEFADWAIEASKTRT-YGGDAAAQAAS 768

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
               V V   +  LL  F+P +  +++  +    +         R  P
Sbjct: 769 RATLVYVFESVLRLLHPFMPFVTEELWQAIPHKGDALIVAPWPARSCP 816



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + H+GHA    + D++ R+ R++G   L+  GTD  G       + 
Sbjct: 118 EPFTIPMPPPNVTGKLHMGHAMFATLQDIMTRYARMNGRPALWLPGTDHAGIATQSVVEK 177

Query: 65  AGV 67
              
Sbjct: 178 MLH 180


>gi|162447403|ref|YP_001620535.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985510|gb|ABX81159.1| valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 859

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/337 (20%), Positives = 142/337 (42%), Gaps = 32/337 (9%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E           +       + +    +P   +N   +++   ++D ++SR+   WG +I
Sbjct: 354 EPRLSLQWFVDMKGLTEQTLKMNQVNFVPERFKNTFENWLN-NIQDWTISRQ-LWWGHRI 411

Query: 221 -------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                                  + ++  W  +     +T G+ +  D +  +++P D+ 
Sbjct: 412 PAWFKGDEVKVQVESPGVDWTQDEDVLDTWFSSALWPFSTLGWPNEDDPNFKRYYPTDVL 471

Query: 262 VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           V G DI+ F    + +     +   P    +        +G K+SKSL N +DP++VI++
Sbjct: 472 VTGYDIIFFWVARMMFQGLEFTKKDPFKTVLLHGLIRDEQGRKMSKSLNNGVDPMDVIDK 531

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            GVDALR+F+V   A G+D  YD   ++   N    N + N ++R VS+ +KD   ++  
Sbjct: 532 YGVDALRFFIVSNAAPGQDTRYDITKIESSWN--FINKLWN-ITRFVSLNIKD-KSLVID 587

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
                  D+ IL+  S  + E  +  +    + A   + + + E   + Y +  K   + 
Sbjct: 588 EDRLNVFDKWILTRLSETITEADKYYERFEFNEASRVLTNFIWEEFANWYLEISK---VS 644

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +P        V + V++ +  LL  F+P + +K++
Sbjct: 645 LQDPKIEQNTQAVLIYVLKDILKLLHPFLPFVTDKLY 681



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +         + H+GHA++  I D++ R  R+ G D L+  G D  G       
Sbjct: 35  NKTPFTVVIPPPNVTGKLHLGHAWDTAIQDIIIRRKRMQGFDALYLPGMDHAGIATQARI 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
            +   +                   + ++ S + R     L +S D      T +++ ++
Sbjct: 95  DDRLKSQGISRYDLGREKYLVKAWEWKEEYSLHIRAQWKALGLSLDYTKERFTLDEKLNE 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++  + +KG IY+G     +  + +   ++ EV  
Sbjct: 155 AVNKVFITLYNKGWIYRGYRIINWDCQAKTALSNIEVEY 193


>gi|254520461|ref|ZP_05132517.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914210|gb|EEH99411.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 358

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/359 (21%), Positives = 145/359 (40%), Gaps = 35/359 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
            + +  A  Y N   H+G    ++  D++AR+HRL G +V+F +GTD HG  +   A+  
Sbjct: 2   NIIVGNAWPYANGPLHLGRIAVLLPGDIIARYHRLMGDEVVFLSGTDCHGTPVTMKAKEE 61

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           G+T      +    F+   D L  S+D F +T    H +  +    ++ + G IY+    
Sbjct: 62  GITPLEATIKYHDEFKRCFDSLGFSFDVFEKTHSDYHEEKVKKFILELYNNGYIYEKEIE 121

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ------------------------YYNAQHNPVQWME 161
             Y      + +D  +                                     N     E
Sbjct: 122 QTYCENCHEFLSDRYIEGKCPHCGEIVSGDQCESCLEIIDSEELLDKRCKLCGNETILKE 181

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            +  FF LS++++ +         +      +  V  ++  GL+D +++R  F+WG+ +P
Sbjct: 182 TKHLFFSLSSFENDVRRLLIRQKGWR--ENAQKIVKRYLDEGLRDRAVTRD-FNWGVDVP 238

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVI-GKDILRFHAIY 274
            +      ++VWI+A+  YLT +           K +     + ++ + GKD + FH + 
Sbjct: 239 LEGYDDKKIFVWIEAVMGYLTASMKCLEERNEDWKEYWQGEDSRVYFVHGKDNIPFHTVI 298

Query: 275 WPAFLLSANLPLPK-KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +PA L    +  P  +V S  ++  +G+  S      I    +++   VD  RY+L   
Sbjct: 299 FPAILAGIGIKNPNLRVISSEYMKLEGKNFSSVKNWAIWGDYIVDNYDVDEFRYYLALN 357


>gi|67922817|ref|ZP_00516316.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67855310|gb|EAM50570.1| Valyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 907

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 140/381 (36%), Gaps = 61/381 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++     K L   + +       +R  +V       LKD  +SR+   
Sbjct: 355 PVEPLLSTQWFVKMEPLAKKALKCLDENNSPNFVPQRWKKVYRDWLVKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          IK+  DP  ++  W  
Sbjct: 414 WGHQIPAWYVISETNGEITDNTPFIVANSEVEALEKAKQEYGDNIKLEQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +N +  K  ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPENTEDLKT-YYPTSTLVTGFDIIFFWVARMTMMAGYFTDEMPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKKRV 350
                   G+K+SK+  N IDP+ +I++ G DALRY L+R++A  G+D     D    + 
Sbjct: 532 HGLVRDENGKKMSKTANNGIDPLILIDKYGTDALRYTLIRDVAGAGQDISLQYDRKTDQS 591

Query: 351 -----NADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R V M LK         P        D  ILS   + +Q+ +
Sbjct: 592 ESVEASRNFANKLWN-AARFVMMHLKGETPQSLGTPEIDKLELCDRWILSRFHQTVQQTK 650

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++   +  A   +   +     D Y +  K   L +  P R          ++     
Sbjct: 651 KQIEAYGLGEAAKGLYEFIWGDFCDWYIELVKT-RLWQETPSR-DVARQTLAYILDGTLK 708

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL  F+P +  +I+  L  ++
Sbjct: 709 LLHPFMPHITEEIWQTLSQSE 729



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K+ E   I           H+GHA+   + DVL R+HR+ G + L   GTD     +   
Sbjct: 37  KDGETYCIVIPPPNVTGTLHMGHAFGDCLMDVLIRYHRMCGHNTLCLPGTDHASIAVHTI 96

Query: 59  -----------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             K  + A    +    Q     + +    D S + F  T ++ 
Sbjct: 97  LDKQLKAEGLTRQDIGREKFLEKAWQWKQESGGQIVNQMKRIGLSADWSRERF--TLDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQH 154
                +  + K+ + G IY+G Y   +     +  +D EV  K  DG  ++ ++
Sbjct: 155 LSKAVKTAFIKLYEAGLIYRGNYLVNWCPASLSAVSDVEVESKEVDGHLWHFRY 208


>gi|146340820|ref|YP_001205868.1| valyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193626|emb|CAL77643.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Bradyrhizobium sp.
           ORS278]
          Length = 985

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 17/278 (6%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
            + ++  W  +     +T G+ D+    K +++P ++ V G DI+ F    W A ++   
Sbjct: 523 DEDVLDTWFSSALWPFSTLGWPDDTPEVK-RYYPTNVLVTGFDIIFF----WVARMMMMG 577

Query: 284 LPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +   K+V      +       KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+
Sbjct: 578 IHFMKEVPFSTVYIHALVRDEKGAKMSKSKGNVIDPLALIDEHGADALRFTLAAMAAQGR 637

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       ++       AN + N  SR   M             A    +  I    +  
Sbjct: 638 DIKLSTQRVEG--YRKFANKLWN-ASRFAEMNGCTVTEGFDPASAKETLNRWIAHEAAAA 694

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+ E ++    + A   +   V +   D Y +  KP  L    P +  T   +     
Sbjct: 695 TREVTEALEAYRFNDAANAIYRFVWDVYCDWYVELSKPTLLGDEGPAKDET-KAMVAWAR 753

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            ++  LL  F+P +   +++     D          R+
Sbjct: 754 DEILKLLHPFMPFITEALWESTAKRDSLLTLSPWPHRV 791



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 56/176 (31%), Gaps = 19/176 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +   I           H+GHA    + D+L RF R+ G DVL+  GTD  G      
Sbjct: 64  RNADPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMV 123

Query: 62  AQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + D++     +    L  S D      T ++  
Sbjct: 124 VERQLMERQQPGRREMGREKFLERVWQWKDESGGTIINQLKRLGASCDWGRERFTMDEGL 183

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                 ++ ++   G IYK      +  +     +D EV +            P++
Sbjct: 184 SKAVVKVFVELHRAGLIYKDKRLVNWDPKLLTAISDLEVQQLEVKGNLWYLRYPIE 239


>gi|229133026|ref|ZP_04261867.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228650444|gb|EEL06438.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 1033

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 151/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTTE         + +      D  K         R   +    E     +        
Sbjct: 404 IRTTE---------IKETFLRNNDSVKWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKEKYEVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    NP++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR   + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARHKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|113476946|ref|YP_723007.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110167994|gb|ABG52534.1| valyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 911

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 139/386 (36%), Gaps = 58/386 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++    +K L   + H +     ER  +V       ++D  +SR+   
Sbjct: 355 PVEPLLSTQWFVKIKPLAEKTLELLDRHNQPKFVPERWTKVYRDWLVKIQDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +KI  DP  ++  W  
Sbjct: 414 WGHQIPAWYVISETNGEIADNTPFVVARFEAEALEVAKKKFGDHVKIQQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +N      K++P      G DI+ F    +      L+  +P      
Sbjct: 473 SSLWPFSTLGWPENTP-DLEKYYPTSTLSTGFDIIFFWVARMTMMGVHLTGKMPFETVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGL-KKR 349
               +   G+K SKS GN I+P+ +IE+ G DALRY L+RE A  G+D   D +    + 
Sbjct: 532 HGLMLDENGKKQSKSAGNGINPLLLIEKYGTDALRYTLMRETAGAGQDVRMDYNRETDES 591

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTP------GAFTESDESILSVCSRVLQEIRE 403
            + + +    N +  +   ++   +G  P              D  ILS   + +Q+  +
Sbjct: 592 ASVEASRNFTNKIWNAARFVMMKLEGKTPEELGKPEVDKLELVDRWILSHFYQTVQQTCD 651

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            + N  +  A   +   +     D Y +  K   L+  + +           V+  +  L
Sbjct: 652 YLDNYGLGEAAKGLYEFIWGYFCDWYLELVKS-RLQGEDENSRLVAQQTLAYVLDGILRL 710

Query: 462 LQAFVPKLANKIFDILFVADENRCFQ 487
           L  F+P +  +I+  L    E  C  
Sbjct: 711 LHPFMPHITEEIWHTLNQVGEENCLA 736



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H GHA+   + D L R+HR+ G + L+  GTD     +    + 
Sbjct: 40  DPYCIVIPPPNVTGSLHAGHAFNNSLIDALIRYHRMRGDNTLYLPGTDHASIAVQTILER 99

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++     +    L +S D      T ++      
Sbjct: 100 KLKADGQTRYDVGREKFLKLAWEWKAESGGTIVNQLRRLGVSTDWTRERFTLDEGLSKAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++G IY+G Y   +    ++  +D EV              P+
Sbjct: 160 IEAFMRLYEQGLIYRGNYLVNWCPASQSAVSDLEVENKEVNGNLWHFRYPL 210


>gi|149202271|ref|ZP_01879244.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144369|gb|EDM32400.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 1039

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 11/265 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ +N      K++P  + + G DI+ F    +   
Sbjct: 603 PVWRDPD-VLDTWFSSGLWPIGTLGWPENTA-ELQKYFPTSVLITGFDIIFFWVARMMMM 660

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + +    P             KG+K+SKSLGNV+DP+++IE+ G DA+R+ L    A G
Sbjct: 661 QYAVVGQKPFAHVYVHALVRDEKGKKMSKSLGNVLDPLDLIEDYGTDAVRFTLTSMAAMG 720

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D    K+ +      +    + N    +         G +P P A    ++ I+   ++
Sbjct: 721 RDLKLSKERIAG--YRNFTTKLWNAARFAEMNGAVGSAGTVPAPTAT--VNKWIIGETAK 776

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
               + E ++N   + A   + + V     D Y +  KP  L      +A T       V
Sbjct: 777 TRATVDEALENFRFNDAANALYAFVWGTVCDWYVEFSKPLLLDGDAATKAET-QATMAWV 835

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           I Q  ILL   +P +  +++  L  
Sbjct: 836 IDQCLILLHPIMPFVTEELWGTLGT 860



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 29/182 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 37  ETFSIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGHDTLWQPGQDHAGIATQMVVER 96

Query: 65  AGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK--- 100
              T           + F+ +                + +    D S + F  +      
Sbjct: 97  KLATEGAPTRREMGREEFLKKVWEWKTQSGGTIINQLKRLGASCDWSRNAFTMSGAPGAP 156

Query: 101 -----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  + +KG IY+G     +    E   +D EV       +      
Sbjct: 157 AGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 216

Query: 156 PV 157
           P+
Sbjct: 217 PL 218


>gi|222085774|ref|YP_002544304.1| valyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|221723222|gb|ACM26378.1| valyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 947

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 138/360 (38%), Gaps = 38/360 (10%)

Query: 132 DEAYYNDDE-VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           D+ YY+  E +      +     H    W   +G  F     ++ L +  + +     P+
Sbjct: 427 DKTYYDWMENIQPWCVSRQLWWGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYLSHEGPM 486

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           +   E +              + F  G  +  D   ++  W  +     +T G+ D    
Sbjct: 487 KAYVEDLL-------------ENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPDETP- 531

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK 299
             A+++P ++ V G DI+ F    W A ++   L   K            V+ H  +  K
Sbjct: 532 ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHFMKDKNGDPVEPFNTVYVHALVRDK 587

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D   D   +      +    +
Sbjct: 588 NGQKMSKSKGNVIDPLELIDQYGADSLRFTLAIMAAQGRDVKLDPSRIAG--YRNFGTKL 645

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M     D       A    +  IL+  +R  +++ E ++    + A   + 
Sbjct: 646 WN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTELARTERDVTEAIEAYRFNDAAGTLY 704

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     D Y +  KP      + +  +        V+ +   LL  F+P +  +++  
Sbjct: 705 RFIWNQFCDWYLELLKP-VFSGDDENAKAEAQSCAAYVLEETYKLLHPFMPFMTEELWAH 763



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 23/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E   I           H+GHA    + D++ RF R+ G DVL+  G D  G         
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 60  -----KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                +      +  + F+D+                + +    D S + F  T ++   
Sbjct: 96  RLAERQQPSRHVMGREAFIDKVWEWKEESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++  +  +G IY+      +  +     +D EV +     +      P++
Sbjct: 154 KAVLEVFVTLYKEGLIYRDKRLVNWDPKMLTAISDIEVEQHEINGHLWHLRYPLE 208


>gi|29831994|ref|NP_826628.1| valyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81717646|sp|Q82CA3|SYV_STRAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29609112|dbj|BAC73163.1| putative valyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 874

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 127/362 (35%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVREGKVKIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDDEVPTGEGWSQDTDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 472 PEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  +  + E+     +    +    +    
Sbjct: 588 ATRFALMNGATVEGELPPVEQQSATDRWILSRLNATVAEVDALYDDYQFAKLSDALFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K         + A     V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSK--TTFMGGGEAAKVSGRVLGEVLDVTLRLLHPIVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPFTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 104

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                               Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELGKEGKSRHDLGRAAFVERVWQWKAESGGQISGQMRRLGDGVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 163 LSQAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 207


>gi|213966169|ref|ZP_03394355.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951184|gb|EEB62580.1| valyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 911

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 125/377 (33%), Gaps = 57/377 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F ++                 I P  +      +V   + D  +SR+   
Sbjct: 362 PIEPLLSLQWFVKVDELAKMSGDAVREGDTVIHPASQEPRWFDWVDD-MHDWCISRQ-LW 419

Query: 216 WG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGS 251
           WG  I I   P                        ++  W  +     +T G+ +     
Sbjct: 420 WGHRIPIWYGPNGEVVCVGPDDEAPTGEGWTQDPDVLDTWFSSALWPFSTMGWPEATP-E 478

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGF 295
             KF+P  + V G DIL F       F   A                 +P          
Sbjct: 479 LEKFYPTSVLVTGYDILFFWVARMMMFSTFAANLPDSPLGKGRDGRPQVPFKDVFLHGLV 538

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN IDP++ + + G DALR+ L R    G D     D  +   N   A
Sbjct: 539 RDEQGRKMSKSLGNGIDPLDWVRDYGADALRFTLARGANPGSDLPVGNDAAQSSRN--FA 596

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             + N  +R   M       + P     T++D  IL    +V  E+   +      +A  
Sbjct: 597 TKLFN-ATRFALMNGAHMGEL-PDRDQLTDTDRWILDRLEQVRAEVDSALDRYEFSKANE 654

Query: 416 QVISLVSE--VDRYFDAQK---PW-----ELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +     +   D Y +  K   P       + +    RA++   V   V+  L  LL   
Sbjct: 655 ALYHFAWDEVCDWYLEMTKVDFPRLNDGETMTEEQAARAASTRLVLGRVLDTLLRLLHPS 714

Query: 466 VPKLANKIFDILFVADE 482
           +P +   ++  L    E
Sbjct: 715 MPFVTETLWKALTDGAE 731



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         Q H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 43  SSKPAYSIVLPPPNVTGQLHMGHALDHTLMDALVRRKRMQGYEVLWLPGMDHAGIATQTK 102

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     +          + FV++                R + D LD S + F  T ++
Sbjct: 103 VEAMLKDSEGKDRFDYGREEFVEKVWEWKHDYGGRIGNQMRQIGDSLDWSRERF--TLDE 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D+G IY+      +S   +   +D EV  
Sbjct: 161 GLSRAVQTIFKELFDRGLIYRAKRMVNWSPVLQTAISDIEVKY 203


>gi|288930565|ref|YP_003434625.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892813|gb|ADC64350.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 864

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 86/447 (19%), Positives = 162/447 (36%), Gaps = 32/447 (7%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
           R+ +  GL++      D  G+   KA + AG+T     ++   +F+    ++ +      
Sbjct: 272 RWWKKHGLELRQVLTRD--GKLNEKAGKYAGLTVSEAREKIIEDFKKEGRLIKV------ 323

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
               +       + W+               +  +  E         K      Y    +
Sbjct: 324 ----EEVDHKVGVCWRC--KTPVEIIPEEQWFVKVDKERVLEAARKIKWIPEHMYLRLED 377

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            V+ ME +    R   +   +  +Y  +    +  +     +   K   K+         
Sbjct: 378 WVESMEWDWVISRQRVFATPIPVWYCENCGETIVAKEEWLPVDPTKDQPKE-----PCPK 432

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G         ++  W+D+    L   G+       + K +P  L   G DI+R  A Y 
Sbjct: 433 CGSTKFRGEDDVLDTWMDSSITPLAIVGWP-----EELKEYPTHLRPQGHDIIRTWAFYT 487

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  L   +P  + V +   +   G K+SKSLGN ++  EVIE+ G D LR +     
Sbjct: 488 ILRSIYLVNQIPWYEIVINGMVLGEDGRKMSKSLGNYVEAEEVIEKYGADCLRQWAAIGG 547

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G D  +    +K    +         ++R  +M L++Y+          ++D  ILS 
Sbjct: 548 VVGSDVAFSWKEIKSA--SRFQQKFW-SLTRFSAMHLENYEPKDEHEQYLRDADRWILSK 604

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++++E+ E M+N     AL  +         D Y +  K   L   +        Y  
Sbjct: 605 LNKLVKEVDEAMENYSFSEALKLIRGFTWYEFADNYVELVK-NRLYSGDEKEKLAARYTL 663

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
            +V+  L  LL  F P L+ + +++LF
Sbjct: 664 YKVMNALIRLLAPFTPFLSEECWNVLF 690



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG      
Sbjct: 29  SKKPHFIIDTPPPYPTGSFHIGNALNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVK 88

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +      K              F ++N +  ++    L +S D      T    ++   
Sbjct: 89  VEELYGIKKNDVPREKFRELCVEFTERNIKRMKETMKKLGLSIDWSKEYVTMYPEYYRKT 148

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ + ++ +KG IYKG +      R E      E+  
Sbjct: 149 QVSFVRLYEKGWIYKGYHPVIVCPRCETTIALAEIEY 185


>gi|328948525|ref|YP_004365862.1| valyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448849|gb|AEB14565.1| Valyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 912

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 149/398 (37%), Gaps = 49/398 (12%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            Y  +E  K + G  Y      V+    + +F ++    DK L+ +++      P +  N
Sbjct: 349 LYKGEEKIKHSVGHCYR-CSTVVEPYLSDQWFVKMKPLADKALAAWKNEEFVFYPRKWEN 407

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------DDP 224
              +     ++D  +SR+   WG +IP                               DP
Sbjct: 408 T-FTHWMENIRDWCISRQ-LWWGHRIPVWYCECGETIVSREDPVKCPKCGADASHLKQDP 465

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+ +        F+P    V   DI+ F    +       + 
Sbjct: 466 D-VLDTWFSSWLWPFSTLGWPEKTS-DLEHFYPTTAIVTAYDIIFFWVSRMIMAGLEFTG 523

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P             +G K+SKSLGN IDP+E+I+  G DAL++ L    A G+D   D
Sbjct: 524 KSPFHDIYIHGLVRDKQGRKMSKSLGNGIDPLEIIDLYGADALKFTLSYMCAQGQDVLVD 583

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           KD  K  + +   N + N  SR +   L+D   +        E D+ I +     ++  R
Sbjct: 584 KDSFK--MGSRFCNKVWN-ASRYILGNLEDRTLIPVADSDLNELDKWIYTCLDNAVKNAR 640

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
              ++   +   + +         D Y +A K       + ++   V  V + V+ +   
Sbjct: 641 AAFESYRYNDGASAIYEYFWNDFCDWYVEATKLSFKNGDDHEKDRAV-SVLLNVLEESLR 699

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           LL  ++P +  +I+  L +A      Q ++ R K G  
Sbjct: 700 LLHPYIPFVTEEIYSKLPLA------QIVENRKKAGGQ 731



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 25/165 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GH     + D++ R+HR+ G D L+  GTD  G       +    
Sbjct: 56  TVVIPPPNVTGVLHMGHGLNNTLQDIVVRYHRMKGDDTLWIPGTDHAGIATQNVVEKQLK 115

Query: 68  TT------------KVFVDQNSRNF--------RDMADVLDISYDDFIRTTEKRHHDTCR 107
                              +   +         R + + +D + + F  T ++      R
Sbjct: 116 KEGKTRNDLGREKFLERTWKVKEDHHNTIVKQQRKLGNSVDWNRERF--TMDEGLSKAVR 173

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYN 151
            ++  + ++G IYKG Y   +  R      DDEV +   DG  Y+
Sbjct: 174 NVFVTLYERGLIYKGHYLVNWCPRCGTALADDEVEHTDTDGFMYH 218


>gi|163759464|ref|ZP_02166549.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283061|gb|EDQ33347.1| valyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 947

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 127/344 (36%), Gaps = 27/344 (7%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE--------VISFVKS 202
           N +    +WME    +                 P+  + +E+  E             + 
Sbjct: 434 NWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGQVFVEKDEETALEAAIQHYIAHEG 493

Query: 203 GLKDLSLSR-KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
             K     + + F  G  +  D   ++  W  +     +T G+ D     K +++  D+ 
Sbjct: 494 PWKAWVEDKLENFKPGEILIRDED-VLDTWFSSALWPFSTLGWPDKTPELK-RYYQTDVL 551

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIE 315
           V G DI+ F    W A ++   L    +   H   +H       G K+SKS GNVIDP+E
Sbjct: 552 VTGFDIIFF----WVARMMMMGLHFMDEEPFHTVYVHALVRDKNGAKMSKSKGNVIDPLE 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I+E G DALR+ L    A G+D   D   +      +    + N  +R   M     D 
Sbjct: 608 LIDEYGADALRFTLAIMAAQGRDVKLDPSRIAG--YRNFGTKLWN-ATRFADMNGAVLDP 664

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
                 A    +  IL+  +R   E+RE ++    + A A +   V     D Y +  KP
Sbjct: 665 AFDPASAKLTINRWILTELTRTAAEVREAIEGYKFNEASAALYRFVWNQLCDWYLELLKP 724

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +             V+ +   LL  F+P +  +++  L
Sbjct: 725 -VFNGEDEAAKVEARACAAYVLAESVKLLHPFMPFMTEELWAHL 767



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 18/143 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA    + D++ R+ R+ G DVL+  G D  G       +   
Sbjct: 38  YAIVIPPPNVTGSLHMGHALNNTLQDIMVRYQRMRGRDVLWQPGMDHAGIATQMVVERQL 97

Query: 67  VTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
              +                 + DQ+     +    L  S D      T ++        
Sbjct: 98  AEKQIHRRDIGREAFVEKIWEWKDQSGGMIFNQLRRLGASCDWSRERFTMDEGLSKAVLE 157

Query: 109 LWKKISDKGDIYKGCYSGWYSLR 131
           ++  +  +G IYK      +  +
Sbjct: 158 VFVTLYKQGLIYKDKRLVNWDPK 180


>gi|163868662|ref|YP_001609871.1| valyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161018318|emb|CAK01876.1| Valyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 910

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 126/356 (35%), Gaps = 43/356 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++   +      +   +      +P     +        ++   +SR+   
Sbjct: 380 PIEPFLTDQWYVHAAELAKPAIEAVQQGKTQFVPDNW-KKTYFNWMQNIQPWCISRQ-LW 437

Query: 216 WG--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTG 243
           WG  I     P                                ++  W  +     +T G
Sbjct: 438 WGHQIPAWYGPDGTVFVEKSEKEALDSAFSHYGEMVELIRDADVLDTWFSSALWPFSTLG 497

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + D      + F+P  L V G DI+ F    +          +P P           KG 
Sbjct: 498 WPDKTT-ELSTFYPTSLSVTGFDIIFFWVARMMMMGLHFMGEVPFPTVYVHALVRDQKGA 556

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN+IDP+E+I++   DALR+ L    A G+D   D   +      + A  + N 
Sbjct: 557 KMSKSKGNIIDPLELIDQYSADALRFTLAIMAAQGRDVKLDTSRIAG--YRNFATKLWN- 613

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M    +D       A    +  IL+  S+ +  +   +++   + + A +   +
Sbjct: 614 ATRFAQMNGVRHDPTFKPGQAKLALNRWILTELSKTISAVTAGIEHYKFNESAATLYRFI 673

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP   +  N D  S     T  V+ ++  LL  F+P +  +++ 
Sbjct: 674 WNTFCDWYLELLKP-IFQGENEDAKSEAQACTAWVLDEVYKLLHPFMPHMTEELWS 728



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 21/170 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--- 64
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 42  CVMLPPPNVTGSLHMGHALNTTIQDIMVRFQRMRGRNVLWQPGMDHAGIATQMVVERQLA 101

Query: 65  AGVTT--------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                                +  +      +    L +S D      T ++      R 
Sbjct: 102 ERQEPTRQEMGREKFIERIWEWRHETGGIIANQLRRLGVSCDWSRERFTMDEGLSQAVRE 161

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++  +  +G IY+      +  +     +D EV +     +      P++
Sbjct: 162 VFVTLYKQGLIYRDKRLVNWDPKLLTAISDLEVEQKEVQGHLWHFRYPLE 211


>gi|289771644|ref|ZP_06531022.1| valyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289701843|gb|EFD69272.1| valyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 780

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 357 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGKVKIHPQE-MEKRYFDWVDNLHDWC 415

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P+                       ++  W  +     +T G+
Sbjct: 416 ISRQ-LWWGHRIPVWYGPEGEVVCVGPGEEPPSGEGWYQDSDVLDTWFSSGLWPFSTLGW 474

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 475 PEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQNGK 533

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 534 KMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 590

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  + V+ E+    ++    +    +    
Sbjct: 591 ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEVDAYYEDYQFAKLSDALFHFA 650

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K     +   + A     V  EV+     LL   VP +   ++  L  
Sbjct: 651 WDEVFDWYVELSK--TTFQAGGEAAEVSKRVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 708

Query: 480 AD 481
            +
Sbjct: 709 GE 710



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 48  SDKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 107

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 108 VERELGKEGKSRHDLGREAFVERVWQWKSESGGQISGQMRRLGDAVAWSRERF--TMDEG 165

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 166 LSQAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 210


>gi|114777967|ref|ZP_01452881.1| Valyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
 gi|114551754|gb|EAU54306.1| Valyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
          Length = 882

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 113/323 (34%), Gaps = 10/323 (3%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
             Y+ +      + +  +    +            S         +        G     
Sbjct: 389 PQYWEKTYFEWMRNIQDWCISRQLWWGHRIPAWYCSDCDHITVSRATPECCEGCGSASVR 448

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ D       +F+P ++ V G DI+ F    +       
Sbjct: 449 QDEDVLDTWFSSGLWPFSTLGWPDKTP-EMDQFYPTNVLVTGFDIIFFWVARMIMMGMKF 507

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  +P             +G+K+SKS GNVIDP+E+  + G DALR+ L      G+D  
Sbjct: 508 TGQVPFRDIYIHALIRDAEGQKMSKSKGNVIDPLEMTGKYGADALRFTLAHMATPGRDVK 567

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D+  ++   N +  N I N  +R V M   D            +++  IL+       E
Sbjct: 568 LDETRIES--NRNFMNKIWN-AARFVFMNRADAVPDASLRPQL-DANRWILAELDTTAAE 623

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + + ++    + A   + S +     D Y +A K   L   +    S      +  +   
Sbjct: 624 VHKALEEYRFNEAAGALYSFIWGTYCDWYVEAAKV-ALWSDDETMISETRTAMLTALEGW 682

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             LL    P +   ++  L  AD
Sbjct: 683 LKLLHPICPYITETLWQELHGAD 705



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 22/190 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I           H+GHA+   I D L R+ R+ G   L+  GTD  G       +   
Sbjct: 39  YCIVIPPPNVTGSLHMGHAFTFTIQDTLIRWQRMQGKSTLWQPGTDHAGIATQMVVERIL 98

Query: 65  -----------------AGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                                 K           + +    D S + F  T ++    + 
Sbjct: 99  DKEGVHRRDLGRERFLDRVWEWKEHSGGTIVNQLKQLGASCDWSRERF--TMDEGLSHSV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           R ++ ++ ++G IY+G     +    E   +D EV    +  ++     P      +   
Sbjct: 157 REVFVRLYEEGLIYRGKRLVNWDPVLETAVSDLEVEHVEEQGHFWHMCYPYADDPSKHVI 216

Query: 167 FRLSAYQDKL 176
              +  +   
Sbjct: 217 VATTRPETMF 226


>gi|242277727|ref|YP_002989856.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242120621|gb|ACS78317.1| valyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 884

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 128/346 (36%), Gaps = 18/346 (5%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P +       + ++       +  +    +                  +       K   
Sbjct: 379 PSETKIFPSNWEKVYYEWLDNIRDWCISRQIWWGHRIPAWTCEDCGELIVANEDPTKCTK 438

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            G       + ++  W  +     +T G+ D      AK++P  + + G DIL F    W
Sbjct: 439 CGSSKLIQEEDVLDTWFSSALWPFSTLGWPDETP-ELAKYYPTSVLITGFDILFF----W 493

Query: 276 PAFLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++   +    ++  H   +        G+K+SKS GNVIDP+E+ ++ G DALR+ L
Sbjct: 494 VARMMMMGIHFQDQIPFHHVYIHALVRDEHGKKMSKSTGNVIDPLEMSDKYGTDALRFTL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
               A G+D    +  ++        N I N   R   M L           A   ++E 
Sbjct: 554 TSFAAMGRDIKLSEQRIEG--YRHFVNKIWNSA-RFALMNLDGKKPEAALEDASGLANEW 610

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTV 447
           IL     V   +RE +++   +     +   +     D Y +  KP +L   +  R    
Sbjct: 611 ILHRLEEVKDTMREAVESYRFNEVAQTMYKFIWNEFCDWYLEMIKP-DLYSDDETRKGAT 669

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
           L V   V+ +  +LL   +P +  +++ +L  + + +   ++  ++
Sbjct: 670 LKVLWTVLSETMVLLHPVMPFVTQEVWSVLPGIENGDIATEAFPEK 715



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +   I           H+GHA  + + D+L R+ R  G +VL+  GTD  G       
Sbjct: 36  DGDPYSIVIPPPNVTGVLHMGHALNITLQDILCRYQRQQGKNVLWVPGTDHAGIATQNVV 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +    T                   + ++   +       +   + +D    T + +   
Sbjct: 96  ERQLKTEGKTRDDLGREKFIERVWEWKEEKGGHILKQIRRMGASVDWDRECFTFDDQRAK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ ++G IYKG Y   +  R      DDEV  
Sbjct: 156 AVRKVFVQLYEEGLIYKGNYIINWCNRCHTALADDEVEH 194


>gi|256787757|ref|ZP_05526188.1| valyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 777

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSMQWWVKVGPLAKAAGDAVRDGKVKIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P+                       ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPEGEVVCVGPGEEPPSGEGWYQDSDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 472 PEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQNGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  + V+ E+    ++    +    +    
Sbjct: 588 ATRFALMNGATVEGPLPDASRMSSTDRWILSRLNSVVAEVDAYYEDYQFAKLSDALFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K     +   + A     V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSK--TTFQAGGEAAEVSKRVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNV 104

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELGKEGKSRHDLGREAFVERVWQWKSESGGQISGQMRRLGDAVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSQAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 207


>gi|147669052|ref|YP_001213870.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270000|gb|ABQ16992.1| valyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 880

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 80/361 (22%), Positives = 135/361 (37%), Gaps = 44/361 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ M  + +F ++       L    S    ILP  R N+V       ++D  
Sbjct: 350 HCQRCSAVIEPMVSKQWFVKMEPLAKPALEAVNSGRIQILPE-RFNKVYQNWMENIRDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I +   P                           ++  W  +     +T
Sbjct: 409 ISRQ-LWWGHRIPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPDVLDTWFSSGLWPHST 467

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D  +  K +F+P  +     DI+ F    +          +P             K
Sbjct: 468 LGWPDQTEDLK-RFYPGTVMETAYDIIFFWVARMIVMGMEDMNEVPFRTVYLHGLIRDDK 526

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SK+ GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + 
Sbjct: 527 GEKMSKTKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLW 584

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V M L +   + P        D  I+S  +RV  ++   M+      A   +  
Sbjct: 585 N-ASRFVIMNLGEAKELTP-EAELPLEDRWIISRMNRVTADVTRLMEEFQFGEAQRVLQD 642

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDI 476
            +     D Y +  K         D AS     V V V+  +  LL  ++P +  +++  
Sbjct: 643 FIWGEFCDWYIELAKVRL-----RDEASVSPRPVLVRVLSSILRLLHPYMPFITEELWSY 697

Query: 477 L 477
           L
Sbjct: 698 L 698



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA    + D++ R+HR+ G   L+  G D  G      
Sbjct: 39  SDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQGEPTLWLPGVDHAGIAAQVV 98

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +V+      R     L  S  +D    T +    
Sbjct: 99  VERELAKQGKTRQQLGRELFLEKMWEWVNPCREKIRHQHMRLGASCDWDRETFTLDAGPV 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + +KG IYKG     +  R     +D EV       +      P++
Sbjct: 159 KAVREIFTNLYEKGLIYKGERIINWCPRCGTAVSDLEVDHKDLAGHIWHLRYPLE 213


>gi|260168670|ref|ZP_05755481.1| valyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261758145|ref|ZP_06001854.1| valyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261738129|gb|EEY26125.1| valyl-tRNA synthetase [Brucella sp. F5/99]
          Length = 910

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 133/352 (37%), Gaps = 18/352 (5%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y N  E+ K A     + +   V    E+ YF  +   Q   +S        I    
Sbjct: 384 DQWYVNAGELAKPAMAAVRDGRTQIVPKNWEKTYFDWMENIQPWCVSRQLWWGHQIPAWY 443

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
             +      KS  +  + +R  +   + +  D   ++  W  +     +T G+ D     
Sbjct: 444 GPDGHCFVEKSEAEAKASARAHYGEDVALERDTD-VLDTWFSSALWPFSTLGWPDKTP-E 501

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISK 305
            A ++P  + V G DIL F    W A ++   L   +++  H   LH       G K+SK
Sbjct: 502 LATYYPTSVLVTGFDILFF----WVARMMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSK 557

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNVIDP+E+++E G DALR+ L    A G+D   D   +      +    + N  +R 
Sbjct: 558 SKGNVIDPLELMDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRF 614

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
             M             A    +  IL+  +R  + + E +     + A       V    
Sbjct: 615 AQMNGVKLAPDFRPENAKLAVNRWILTELTRATRAVTEGIATYRFNEAAGAAYRFVWNQF 674

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            D Y +  KP      +    + V       + Q+  LL  F+P +  +++ 
Sbjct: 675 CDWYLEFLKP-IFMGDDEAAKAEVQATAAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|169628693|ref|YP_001702342.1| valyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240660|emb|CAM61688.1| Valyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 879

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 78/353 (22%), Positives = 126/353 (35%), Gaps = 45/353 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++ +   K      S    I P        ++V   + D  +SR+   
Sbjct: 362 PIEPRLSMQWWVKVESLARKAGDAVRSGDTVIHPASLEPRWFAWVDD-MHDWCISRQ-LW 419

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 420 WGHRIPIWHGPGGEIVCLGPDEAAPEGYEQDPDVLDTWFSSALWPFSTMGWPEATP-ELE 478

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK-GEKIS 304
           KF+P  + V G DIL F       F         L         VF HG I  + G+K+S
Sbjct: 479 KFYPTSVLVTGYDILFFWVARMMMFGTFVADGPALHGGKVPFDNVFLHGLIRDQFGQKMS 538

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN IDP++ +E  G DALR+ L R  + G D    +D    R + +    + N  +R
Sbjct: 539 KSKGNGIDPLDWVEMFGADALRFTLARGASPGGDLSIGEDA--ARASRNFTTKLFN-ATR 595

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
              M       + P     T++D  IL    +V  E+   +       A   +     + 
Sbjct: 596 FALMNGAALGEL-PDVAELTDADRWILGRLEQVRAEVDGALDRYEFSVACEGLYHFAWDE 654

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             D Y +  K         DRA +   V   V+  L  LL   +P +   ++ 
Sbjct: 655 FCDWYLELAKV-----QMVDRAESTRVVLATVLDTLLRLLHPVIPFVTEVLWK 702



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 42  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALTRRKRMQGYEVLWLPGMDHAGIATQSV 101

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 102 VEKQLAADGKTKEDFGRELFIEKVWDWKRESGGTIGGQMRRLGDGVDWSRDRF--TMDEG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++KK+ D G IY+      +S   +   +D EV  
Sbjct: 160 LSRAVRTIFKKLFDAGLIYRAERLVNWSPELKTAISDLEVKY 201


>gi|282882605|ref|ZP_06291224.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297580|gb|EFA90057.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 1033

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 149/406 (36%), Gaps = 65/406 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +    H P+ +     ++  ++ ++DKL+    ++     P     +        L
Sbjct: 384 HNYPHCWRCHTPLIYYAHPSWYIEVTKFKDKLVDN--NNGVTWFPPFVGEKRFGNWLENL 441

Query: 205 KDLSLSRKTFDWGIK--------------------------------------------- 219
            D ++SR    WG                                               
Sbjct: 442 NDWAISRSR-YWGTPLPIWRCKCGHVESIGSRKELKEKALEDIDENVELHRPYVDNIHLK 500

Query: 220 ------IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                 I    + ++ VW D+ +       Y      +  + +PAD    G D     F+
Sbjct: 501 CPKCGDIMTREKDVIDVWFDSGSMPFAQWHYPFENKDNFDELFPADFICEGIDQTRGWFY 560

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   +  ++   P    + +   +  +G+K+SKS GN + P E+ ++ G D +R++L+ 
Sbjct: 561 SLLAISTYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVAPFELFDKYGADVVRWYLLY 620

Query: 332 EIACGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                    +D+DGL++  +        I N  S   +    D            E D+ 
Sbjct: 621 VSPPWNPTKFDEDGLREMESKFFRSLRNIYNFFSLYANTDDIDPRTFQVKYEDRDEIDKW 680

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF--DAQKPWELKKTNPDRAS 445
           +LS  +R+++ +R++M    + + + ++   V E   + Y   + ++ W+  K +   A 
Sbjct: 681 LLSKYNRLVKVVRDDMDKFELTKVVREISDFVIEELSNWYIRRNRRRFWKTDKDDSKFA- 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            V   T EV+  ++ L+   VP ++ ++F  L   +E+       Q
Sbjct: 740 -VYSTTYEVLLGISKLIAPIVPFISEELFRSL-TDEESVHLADFPQ 783



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K          N +P I H     + D+  R+H + G  V    G D HG  +   
Sbjct: 37  EGNKKYIFYEGPPTANGKPGIHHVMARTLKDLTCRYHTMLGYKVNRKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       KV V +  + +R++   +   I  D    T E  +
Sbjct: 97  VEKKLGLHNKQDIEKYGIEKFNEKCKVSVFEYEKEWRELTKRMGYLIDLDHPYVTLENDY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   +     IY+G     Y  R        EV +G +
Sbjct: 157 IESVWNILNNMFKDDLIYEGHKILPYCARCGTGLASHEVAQGYE 200


>gi|289432321|ref|YP_003462194.1| valyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946041|gb|ADC73738.1| valyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 880

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 80/361 (22%), Positives = 135/361 (37%), Gaps = 44/361 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ M  + +F ++       L    S    ILP  R N+V       ++D  
Sbjct: 350 HCQRCSAVIEPMVSKQWFVKMEPLAKPALEAVNSGRIQILPE-RFNKVYQNWMENIRDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I +   P                           ++  W  +     +T
Sbjct: 409 ISRQ-LWWGHRIPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPDVLDTWFSSGLWPHST 467

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D  +  K +F+P  +     DI+ F    +          +P             K
Sbjct: 468 LGWPDQTEDLK-RFYPGTVMETAYDIIFFWVARMIVMGMEDMNEVPFRTVYLHGLIRDDK 526

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SK+ GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + 
Sbjct: 527 GEKMSKTKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLW 584

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V M L +   + P        D  I+S  +RV  ++   M+      A   +  
Sbjct: 585 N-ASRFVIMNLGEAKELTP-EAELPLEDRWIISRMNRVTADVTRLMEEFQFGEAQRVLQD 642

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDI 476
            +     D Y +  K         D AS     V V V+  +  LL  ++P +  +++  
Sbjct: 643 FIWGEFCDWYIELAKVRL-----RDEASVSPRPVLVRVLSSILRLLHPYMPFITEELWSY 697

Query: 477 L 477
           L
Sbjct: 698 L 698



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA    + D++ R+HR+ G   L+  G D  G      
Sbjct: 39  SDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQGEPTLWLPGVDHAGIAAQVV 98

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +V+      R     L  S  +D    T +    
Sbjct: 99  VERELAKQGKTRQQLGRELFLEKMWEWVNPCREKIRHQHMRLGASCDWDRETFTLDAGPV 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + +KG IYKG     +  R     +D EV       +      P++
Sbjct: 159 KAVREIFTNLYEKGLIYKGERIINWCPRCGTAVSDLEVDHKDLAGHIWHLRYPLE 213


>gi|73748272|ref|YP_307511.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|90103541|sp|Q3ZZG9|SYV_DEHSC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|73659988|emb|CAI82595.1| valyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 880

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 80/361 (22%), Positives = 135/361 (37%), Gaps = 44/361 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ M  + +F ++       L    S    ILP  R N+V       ++D  
Sbjct: 350 HCQRCSAVIEPMVSKQWFVKMEPLAKPALEAVNSGRIQILPE-RFNKVYQNWMENIRDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I +   P                           ++  W  +     +T
Sbjct: 409 ISRQ-LWWGHRIPVWYCPCGEMIVAKVDPTVCPKCGGTELEQDPDVLDTWFSSGLWPHST 467

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D  +  K +F+P  +     DI+ F    +          +P             K
Sbjct: 468 LGWPDQTEDLK-RFYPGTVMETAYDIIFFWVARMIVMGMEDMNEVPFRTVYLHGLIRDDK 526

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+SK+ GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   AN + 
Sbjct: 527 GEKMSKTKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FANKLW 584

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR V M L +   + P        D  I+S  +RV  ++   M+      A   +  
Sbjct: 585 N-ASRFVIMNLGEAKELTP-EAELPLEDRWIISRMNRVTADVTRLMEEFQFGEAQRVLQD 642

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDI 476
            +     D Y +  K         D AS     V V V+  +  LL  ++P +  +++  
Sbjct: 643 FIWGEFCDWYIELAKVRL-----RDEASVSPRPVLVRVLSSILRLLHPYMPFITEELWSY 697

Query: 477 L 477
           L
Sbjct: 698 L 698



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA    + D++ R+HR+ G   L+  G D  G      
Sbjct: 39  SDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQGEPTLWLPGVDHAGIAAQVV 98

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +V+      R     L  S  +D    T +    
Sbjct: 99  VERELAKQGKTRQQLGRELFLEKMWEWVNPCREKIRHQHMRLGASCDWDRETFTLDAGPV 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + +KG IYKG     +  R     +D EV       +      P++
Sbjct: 159 KAVREIFTNLYEKGLIYKGERIINWCPRCGTAVSDLEVDHKDLAGHIWHLRYPLE 213


>gi|241204404|ref|YP_002975500.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858294|gb|ACS55961.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 947

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 38/360 (10%)

Query: 132 DEAYYNDDE-VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           D+ YY   E +      +     H    W   +G  F     ++ L +  + +     P+
Sbjct: 427 DKTYYEWMENIQPWCVSRQLWWGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYLSHEGPM 486

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           +   E +              + F  G  +  D   ++  W  +     +T G+ D    
Sbjct: 487 KAYVEDLL-------------ENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPDETP- 531

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK 299
             A+++P ++ V G DI+ F    W A ++   L L K            V+ H  +  K
Sbjct: 532 ELARYYPTNVLVTGFDIIFF----WVARMMMMGLHLMKDEDGEPVEPFETVYVHALVRDK 587

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +      +    +
Sbjct: 588 NGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKL 645

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M     D       A    +  IL+  +R  +++ E ++    + A   + 
Sbjct: 646 WN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTELARTERDVTEALEAFRFNDAAGALY 704

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V     D Y +  KP      +    +     +  ++ ++  LL  F+P +  +++  
Sbjct: 705 RFVWNEVCDWYLELLKP-VFNGEDEGAKAEAQACSAYILEEIYKLLHPFMPFMTEELWAH 763



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 23/183 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFAIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRRDMGREAFIDKIWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++  +  +G IYK      +  +     +D EV +            P++     
Sbjct: 154 KAVIEVFVTLYKEGLIYKDNRLVNWDPKLLTAISDIEVEQHEVKGNLWHLRYPLEKGVTY 213

Query: 164 GYF 166
            Y 
Sbjct: 214 QYP 216


>gi|229011487|ref|ZP_04168675.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228749778|gb|EEL99615.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 1033

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 144/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTTE         + +      D  K         R   +    E     +        
Sbjct: 404 IRTTE---------IKETFLRNNDSVKWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFSPKSIAELRKHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPEEKYEVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    NP++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|300813634|ref|ZP_07093962.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300512270|gb|EFK39442.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 1033

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 149/406 (36%), Gaps = 65/406 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +    H P+ +     ++  ++ ++DKL+    ++     P     +        L
Sbjct: 384 HNYPHCWRCHTPLIYYAHPSWYIEVTKFKDKLVDN--NNGVTWFPPFVGEKRFGNWLENL 441

Query: 205 KDLSLSRKTFDWGIK--------------------------------------------- 219
            D ++SR    WG                                               
Sbjct: 442 NDWAISRSR-YWGTPLPIWRCKCGHVESIGSRKELKEKALEDIDENVELHRPYVDNIHLK 500

Query: 220 ------IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                 I    + ++ VW D+ +       Y      +  + +PAD    G D     F+
Sbjct: 501 CPKCGDIMTREKDVIDVWFDSGSMPFAQWHYPFENKDNFDELFPADFICEGIDQTRGWFY 560

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   +  ++   P    + +   +  +G+K+SKS GN + P E+ ++ G D +R++L+ 
Sbjct: 561 SLLAISTYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVAPFELFDKYGADVVRWYLLY 620

Query: 332 EIACGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                    +D+DGL++  +        I N  S   +    D            E D+ 
Sbjct: 621 VSPPWNPTKFDEDGLREMESKFFRSLRNIYNFFSLYANTDDIDPRTFQVKYEDRDEIDKW 680

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF--DAQKPWELKKTNPDRAS 445
           +LS  +R+++ +R++M    + + + ++   V E   + Y   + ++ W+  K +   A 
Sbjct: 681 LLSKYNRLVKVVRDDMDKFELTKVVREISDFVIEELSNWYIRRNRRRFWKTDKDDSKFA- 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            V   T EV+  ++ L+   VP ++ ++F  L   +E+       Q
Sbjct: 740 -VYATTYEVLLGISKLIAPIVPFISEELFRSL-TDEESVHLADFPQ 783



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K          N +P I H     + D+  R+H + G  V    G D HG  +   
Sbjct: 37  EGNKKYIFYEGPPTANGKPGIHHVMARTLKDLTCRYHTMLGYKVNRKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       KV V +  + +R++   +   I  D    T E  +
Sbjct: 97  VEKKLGLHNKQDIEKYGIEKFNEKCKVSVFEYEKEWRELTKRMGYLIDLDHPYVTLENDY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   +     IY+G     Y  R        EV +G +
Sbjct: 157 IESVWNILNNMFKDDLIYEGHKILPYCARCGTGLASHEVAQGYE 200


>gi|332180370|gb|AEE16058.1| Valyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 938

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 81/381 (21%), Positives = 147/381 (38%), Gaps = 42/381 (11%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            + ++E    + G  Y   +  V+    + +F ++    DK L+ +++      P +  N
Sbjct: 365 LFKEEEKITHSVGHCYR-CNTVVEPYLSDQWFVKMKPLADKALAAWKNGEIVFYPRKWEN 423

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIP--------------DDPQ--------------- 225
              S     ++D  +SR+   WG +IP               DP                
Sbjct: 424 T-YSHWMENIRDWCISRQ-LWWGHRIPVWYCKKCGEMIVSRTDPDSCPKCGAAAADLAQD 481

Query: 226 -YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+ +N      +F+P    V   DI+ F    +       + 
Sbjct: 482 PDVLDTWFSSWLWPFSTLGWPENTG-DLQRFYPTTALVTAYDIIFFWVSRMIMAGLEFTG 540

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P             +G K+SKSLGN +DP+E+I E G DAL++ L    A G+D   D
Sbjct: 541 KAPFRDIYIHGLVRDKQGRKMSKSLGNGLDPLEIIAEYGSDALKFTLGFMCAQGQDVLVD 600

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           K+  K  + +  AN + N  SR +   L+  + +  T    TE D  I        +  R
Sbjct: 601 KESFK--LGSRFANKVWN-ASRYILGNLEGRELVPVTDSDLTELDVWIYGRLDAAARSAR 657

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +++   + A   +         D Y +A K       + ++   V  V + V+ +   
Sbjct: 658 SALESYRYNDAAQTLYEFFWNDFCDWYVEATKLSFRSGDDAEKDRAV-SVLLNVLEESLR 716

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL  ++P +  +I+  L  A+
Sbjct: 717 LLHPYLPFVTEEIYAKLPRAE 737



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +   +           H+GH     + D++ R+HR+ G D L+  GTD  G      
Sbjct: 50  QNAQPYTVVIPPPNVTGVLHMGHGLNNTLQDIVVRYHRMKGDDTLWLPGTDHAGIATQNV 109

Query: 62  AQNAGVTT--------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          K   D   +  R + + +D + + F  T ++ 
Sbjct: 110 VERRLKKEGLSRRDLGREKFLERTWAVKKEHHDIIVKQQRKLGNSVDWTRERF--TMDEG 167

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++  + ++G +Y+G Y   +         DDEV  
Sbjct: 168 LSKAVRDVFVTLYERGLVYRGNYLVNWCPSCGTALADDEVDH 209


>gi|163939986|ref|YP_001644870.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862183|gb|ABY43242.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 1033

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 151/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTTE         + +      D  K         R   +    E     +        
Sbjct: 404 IRTTE---------IKETFLRNNDSVKWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFSPKSIAELRKHSTKETP-----EDLELHKPYVDEVKVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKEKYEVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    NP++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|226360454|ref|YP_002778232.1| valyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238939|dbj|BAH49287.1| valyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 891

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 121/364 (33%), Gaps = 50/364 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++ +          +    I P  +     ++V   + D  +SR+   W
Sbjct: 366 IEPRLSLQWWVKVESLAKAAGDAVRNGDTVIHPASQEPRWFAWVDD-MHDWCISRQ-LWW 423

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +       K
Sbjct: 424 GHRIPIWYGPDGEVACFGPDETAPEGWVQDPDVLDTWFSSGLWPFSTMGWPEKTP-ELEK 482

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA-------------NLPLPKKVFSHGFILHKGE 301
           F+P  + V G DIL F       F                  +P              G+
Sbjct: 483 FYPTSVLVTGYDILFFWVARMMMFGTYVSEDDAISGGKSGPQMPFDDVFLHGLVRDQFGK 542

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  + N 
Sbjct: 543 KMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGEDHAQSSRN--FATKLFN- 599

Query: 362 VSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
              +    L +     P PG    T++D  IL    +V  ++          +A   +  
Sbjct: 600 ---ATKFALMNGAAPAPLPGRGELTDADRWILDRLDQVRGDVDTAFDRYEFSKACEALFH 656

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   D Y +  K       N   A+    V   V+  L  LL   +P +   ++  L
Sbjct: 657 FAWDEVCDWYLELAK--VQFAENDTVAANTRAVLGNVLDALLRLLHPVIPFVTETLWKAL 714

Query: 478 FVAD 481
              +
Sbjct: 715 TGGE 718



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L+R  R+ G +VL+  G D  G      
Sbjct: 45  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALSRRKRMQGYEVLWLPGMDHAGIATQTV 104

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T +  
Sbjct: 105 VEKQLAVDGKTKEDFGRELFIDKVWDWKRESGGTIGGQMRRIGDSVDWSRDRF--TMDDG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D G IY+      +S   +   +D EV  
Sbjct: 163 LSRAVQTIFKRMYDDGLIYRAERLVNWSPVLQTAISDIEVKF 204


>gi|226307287|ref|YP_002767247.1| valyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226186404|dbj|BAH34508.1| valyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 894

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 120/366 (32%), Gaps = 52/366 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++            +    I P  +      +V   + D  +SR+   W
Sbjct: 367 IEPRLSLQWWVKVETLAKAAGDAVRNGDTVIHPASQEPRWFDWVD-NMHDWCISRQ-LWW 424

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I +   P+                     ++  W  +     +T G+ DN      K
Sbjct: 425 GHRIPVWYGPEGEVACFGPDETAPEGWVQDPDVLDTWFSSGLWPFSTMGWPDNTP-ELEK 483

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS---------------ANLPLPKKVFSHGFILHK 299
           F+P  + V G DIL F       F                  A +P              
Sbjct: 484 FYPTSVLVTGYDILFFWVARMMMFGTYVSEDESITAGPGKSGAQMPFKDVFLHGLVRDQY 543

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  + 
Sbjct: 544 GKKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGEDSAQSSRN--FATKLF 601

Query: 360 NLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N    +    L +     P P     T++D  IL     V  E           +A   +
Sbjct: 602 N----ATKFALMNGAAPAPLPARSELTDADRWILDRLDTVQAEADAAFDRYEFSKACEGL 657

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +   D Y +  K       +   A+    V   V+  L  LL   +P +   ++ 
Sbjct: 658 FHFAWDEVCDWYLELAK--VQFAADEAVAANTRAVLGNVLDALLRLLHPVIPFVTETLWK 715

Query: 476 ILFVAD 481
           +L   +
Sbjct: 716 VLTGGE 721



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + DVL+R  R+ G +VL+  G D  G      
Sbjct: 46  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDVLSRRKRMQGYEVLWLPGMDHAGIATQSV 105

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 106 VEKQLAADGKTKEDFGRELFIDKVWDWKRESGGTIGGQMRRIGDGVDWSRDRF--TMDEG 163

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D+G IY+      +S   +   +D EV  
Sbjct: 164 LSRAVQTVFKRMFDEGLIYRAERLVNWSPVLQTAISDIEVKF 205


>gi|206889812|ref|YP_002248722.1| valyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741750|gb|ACI20807.1| valyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 943

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 139/408 (34%), Gaps = 26/408 (6%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG----QYYNAQHNPVQWM 160
                +  + D  D        W       Y  + +   G +     +    +   +   
Sbjct: 392 WVNNYYAWMRDIKDWCISRQLWWGHRIPVWYCAECKTIDGKEQGDLIEILFYKPITLNGK 451

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E  G  F             E   + I   +      +  +        S+       ++
Sbjct: 452 EIWGGSFNELKKLGVSKEEIEQRAKMIKIPKEIKHFANREEPKTCPYCGSK-------EL 504

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             DP  ++  W  +     +T G+ +  +  K +F+P ++ V G DI+ F    +     
Sbjct: 505 IQDPD-VLDTWFSSALWPFSTLGWPEETEDLK-RFYPTNVLVTGFDIIFFWVARMIMMGM 562

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               ++P             KG+K+SKS GNVIDPI +IE+ G DA R+ L    A G+D
Sbjct: 563 KFMKDVPFRDVYIHALVRDSKGQKMSKSKGNVIDPIVMIEKYGADAFRFTLAAFAAQGRD 622

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             + ++ ++        N I N +   +S         +      +  D  ILS  S  +
Sbjct: 623 IKFSEERVEG--YRHFINKIWNAMKFIMSFAHLRTKEEVKLEDVKSLKDRWILSKLSDAI 680

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            E    +     + A   V   +     D Y +  K   L     ++  TV      V  
Sbjct: 681 YETNRALDAYRFNDAAGTVYQFLWHEFCDWYIELSKV-VLYSDTEEKDETVNC-LFYVFE 738

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
            +  LL  F+P +  +I+  L +  +    +SL   L P   L    +
Sbjct: 739 NILKLLHPFMPYVTEEIW--LNILGKE---KSLMISLYPTHDLINKDE 781



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D+L R+ R+ G   L+  GTD  G      
Sbjct: 37  SEKPSYCIVIPPPNVTGTLHMGHALNATLQDILIRWKRMLGYAALWIPGTDHAGIATQNV 96

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K     +     + +    D S   F  T ++ 
Sbjct: 97  VERQLLQEGIDRYQLGRTAFLERVWQWKESCGGRIIEQLKRIGASCDWSRLRF--TMDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ ++ ++G IY+      +  R     +D EV  
Sbjct: 155 LSQAVKEVFLRLFEEGLIYRDLRLINWCPRCHTALSDLEVEH 196


>gi|297199667|ref|ZP_06917064.1| valyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713963|gb|EDY57997.1| valyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 876

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 125/364 (34%), Gaps = 39/364 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P +  ++        + D  
Sbjct: 354 HCSRCKTTVEPRLSLQWWVKVGPLAKAAGDAVRDGRVKIHPED-MSKRYFDWVDNMHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY------------------------IMYVWIDALTNYLTTT 242
           +SR+   WG  I I   P                          ++  W  +     +T 
Sbjct: 413 ISRQ-LWWGHRIPIWYGPDGEVVCVGPDEEPPGTEAEGWTQDSDVLDTWFSSGLWPFSTL 471

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHK 299
           G+ +  +  + KF+P D+ + G DI+ F     + +  + +    P      +       
Sbjct: 472 GWPEQTEDLR-KFYPTDVLLTGHDIIFFWVARMMMFGLYAMDGQAPFHTIALTGLVRDEF 530

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS  N +DP+  ++  G DA+R+ L      G D    +D +K   N    N + 
Sbjct: 531 GKKMSKSNPNAVDPLVWMDAYGSDAVRFTLANGANPGADVPIGEDWVKASRN--FTNKLW 588

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M     +G +P     + +D  ILS  +  + ++     +    +    +  
Sbjct: 589 N-ATRFALMNGATVEGPLPDASEMSATDRWILSRLNTTVAQVDAYYDDYQFAKLADALYH 647

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   D Y +  K          R S    V  EV+     LL   +P + + ++  L
Sbjct: 648 FAWDEVFDWYVELSKTTFFAGGEQARVS--GRVLGEVLDVTLRLLHPVIPFVTDALWTTL 705

Query: 478 FVAD 481
              +
Sbjct: 706 TGGE 709



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA++  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTIVIPPPNVTGSLHLGHAFQHTLMDALTRRKRMQGYEALWLPGMDHAGIATQNK 104

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + +  +     R + D +D S + F  T ++ 
Sbjct: 105 VEQQLAEEGKSRHDLGREEFVERVWQWKEEYGGRILGQMRRLGDGVDWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                  ++K++ +   IY+      +  R     +D EV    D
Sbjct: 163 LSKAVLTIFKRLYEDELIYRAERIINWCPRCLTAISDIEVEYQED 207


>gi|257055270|ref|YP_003133102.1| valyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585142|gb|ACU96275.1| valyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 882

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 128/367 (34%), Gaps = 44/367 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E   +        + D +
Sbjct: 349 HCSRCDTVIEPRLSLQWWVKVEPLAKAAGDAVRDGRVKIHPPE-MAKRYFDWVDNMHDWT 407

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +    ++T G+
Sbjct: 408 ISRQ-LWWGHRIPVWYGPNGETVCVGPDEEPPSGEGWTQDPDVLDTWFSSGLWPMSTLGW 466

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI 296
            +  D   AKF+P  +   G DIL F       F L           +P           
Sbjct: 467 PEPTD-DLAKFYPTSVLSTGYDILFFWVARMMMFGLYGMRDNGPERSIPFEHVYLHGLIR 525

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+K+SKS GNVIDP++ ++  G DA R+ L R    G D    ++      + +   
Sbjct: 526 DAHGKKMSKSRGNVIDPLDWMDRFGADATRFTLARGANPGADMALAEEW--AAGSRNFCT 583

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + N  +R            +P     TE+D  IL   S V  E+   +++    +A   
Sbjct: 584 KLWN-ATRFAVANGATVATSVPEADELTEADRWILGRLSAVASEVDSLLEDFQFAKATNL 642

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +     +   D Y +  K     + + ++A +   V   V+  +  LL  F+P +  +++
Sbjct: 643 LYHFTWDELCDWYLELAK----VQLSGEKADSTRVVLGRVLDVVLRLLHPFIPFITERLW 698

Query: 475 DILFVAD 481
             L   +
Sbjct: 699 TTLTGGE 705



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D + R  R+ G +VL+  G D  G      
Sbjct: 40  SDKPPFSIVLPPPNVTGSLHMGHALNHTLMDAMTRRRRMQGYEVLWLPGMDHAGIATQNV 99

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                            +  +     + + D +D S + F  T ++ 
Sbjct: 100 VEREIAKEGLSRHDLGRERFVERVWEWKAEYGGKILDQMKRLGDGVDWSRERF--TMDES 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D G +Y+      +  R     +D EV    D
Sbjct: 158 LSRAVQTMFKRLYDDGLVYRAERIINWCPRCMTALSDIEVDHSDD 202


>gi|215427833|ref|ZP_03425752.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|218754182|ref|ZP_03532978.1| valyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|253798472|ref|YP_003031473.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435]
 gi|254551498|ref|ZP_05141945.1| valyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|294994442|ref|ZP_06800133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635056|ref|ZP_06952836.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|306776719|ref|ZP_07415056.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001]
 gi|306780493|ref|ZP_07418830.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002]
 gi|306785245|ref|ZP_07423567.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003]
 gi|306789604|ref|ZP_07427926.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004]
 gi|306793931|ref|ZP_07432233.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005]
 gi|306798325|ref|ZP_07436627.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006]
 gi|306804200|ref|ZP_07440868.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008]
 gi|306808771|ref|ZP_07445439.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007]
 gi|307080535|ref|ZP_07489705.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011]
 gi|307085135|ref|ZP_07494248.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012]
 gi|308378018|ref|ZP_07668650.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009]
 gi|313659383|ref|ZP_07816263.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|253319975|gb|ACT24578.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 1435]
 gi|308214880|gb|EFO74279.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu001]
 gi|308326642|gb|EFP15493.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu002]
 gi|308330067|gb|EFP18918.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu003]
 gi|308333907|gb|EFP22758.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu004]
 gi|308337710|gb|EFP26561.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu005]
 gi|308341391|gb|EFP30242.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu006]
 gi|308344878|gb|EFP33729.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu007]
 gi|308349188|gb|EFP38039.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu008]
 gi|308353809|gb|EFP42660.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu009]
 gi|308361703|gb|EFP50554.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu011]
 gi|308365313|gb|EFP54164.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis SUMu012]
 gi|323718956|gb|EGB28106.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CDC1551A]
          Length = 886

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 419 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 538 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 596 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 654 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 707

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 708 LTGRE---SLVSADWPEPSGISV 727



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 41  STKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 101 VEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R ++K++ D G IY+      +S   +   +D EV   
Sbjct: 159 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLEVNYR 201


>gi|15609585|ref|NP_216964.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841972|ref|NP_337009.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793629|ref|NP_856122.1| valyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638331|ref|YP_978555.1| valyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662283|ref|YP_001283806.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823649|ref|YP_001288403.1| valyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|215404386|ref|ZP_03416567.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412207|ref|ZP_03420969.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215431396|ref|ZP_03429315.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|224990825|ref|YP_002645512.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254232583|ref|ZP_04925910.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis C]
 gi|254365225|ref|ZP_04981271.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|260201576|ref|ZP_05769067.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205754|ref|ZP_05773245.1| valyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443974|ref|ZP_06433718.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289575143|ref|ZP_06455370.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85]
 gi|289746231|ref|ZP_06505609.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289751055|ref|ZP_06510433.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92]
 gi|289754557|ref|ZP_06513935.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762618|ref|ZP_06521996.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis GM 1503]
 gi|297732047|ref|ZP_06961165.1| valyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525927|ref|ZP_07013336.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|54039701|sp|P67600|SYV_MYCBO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|54042057|sp|P67599|SYV_MYCTU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2791488|emb|CAA16025.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE)
           (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13882245|gb|AAK46823.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619222|emb|CAD97336.1| PROBABLE VALYL-tRNA SYNTHASE PROTEIN VALS (VALYL-tRNA SYNTHETASE)
           (VALINE--tRNA LIGASE) (VALINE TRANSLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121493979|emb|CAL72456.1| Probable valyl-tRNA synthase protein valS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601642|gb|EAY60652.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis C]
 gi|134150739|gb|EBA42784.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506435|gb|ABQ74244.1| valyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722176|gb|ABR06801.1| valyl-tRNA synthase valS (valyl-tRNA synthetase) [Mycobacterium
           tuberculosis F11]
 gi|224773938|dbj|BAH26744.1| valyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289416893|gb|EFD14133.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289539574|gb|EFD44152.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis K85]
 gi|289686759|gb|EFD54247.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289691642|gb|EFD59071.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis T92]
 gi|289695144|gb|EFD62573.1| valyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710124|gb|EFD74140.1| valyl-tRNA synthase protein valS (valyl-tRNA synthetase)
           [Mycobacterium tuberculosis GM 1503]
 gi|298495721|gb|EFI31015.1| valyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|326904063|gb|EGE50996.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis W-148]
 gi|328458240|gb|AEB03663.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 4207]
          Length = 876

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 351 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 408

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 409 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 467

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 468 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 527

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 528 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 585

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 586 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 643

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 644 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 697

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 698 LTGRE---SLVSADWPEPSGISV 717



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 31  STKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 90

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 91  VEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R ++K++ D G IY+      +S   +   +D EV   
Sbjct: 149 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLEVNYR 191


>gi|120603281|ref|YP_967681.1| valyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120563510|gb|ABM29254.1| valyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 884

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 136/400 (34%), Gaps = 25/400 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAY 172
              G  Y+        + ++ +    ++   A           P  WM+    +F     
Sbjct: 342 HSVGHCYRCKTVVEPHMSEQWFVASTKLAPRARAAVPQMTQIFPESWMKT---YFNWLDN 398

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                   +      +P     +    + S     +           +  DP  ++  W 
Sbjct: 399 IRDWCISRQIWWGHRIPAWTCGKCGKLIVSEQDPTACPDCGCT---DLTQDPD-VLDTWF 454

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +     +T G+        A F+P  + V G DIL F    W A ++   +    +V  
Sbjct: 455 SSALWPFSTMGWPGKTK-DLATFYPTSVLVTGFDILFF----WVARMMMLGMHFMDEVPF 509

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
               LH      +G K+SKS GNVIDP+ +I++ G D+LR+ L    A G+D    +D +
Sbjct: 510 KHVYLHALVRDGEGRKMSKSTGNVIDPLAMIDKYGTDSLRFTLAAFAAMGRDIKLSEDRI 569

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +        N + N    S+  + ++    +          + IL     +       + 
Sbjct: 570 EG--YRHFVNKVWNAARFSLMNLPEEAPVSLDLDNVKGMHHKWILHRLEELKASQAAGID 627

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               +     +         D Y +  KP        +R +T  YV   V+R+  +LL  
Sbjct: 628 GYRFNEVAQGLYRFWWNEFCDWYLELIKPDMQAGG--ERQATAQYVLWTVLREALLLLHP 685

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           F+P +  +++  L     +     L    +PG    K  +
Sbjct: 686 FMPFVTAEVWQALPGHAGDDIATKLYPAARPGCRDVKDAE 725



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA   ++ DVL R  R  G  VL+  GTD  G       + 
Sbjct: 38  EPYSIVIPPPNVTGALHIGHALNHVLIDVLCRNARQQGKKVLWLPGTDHAGIATQNVVER 97

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A                        + + ++     R + D +D + + F  T ++    
Sbjct: 98  ALAKEGLSRHDLGREAFIERVWQWKEEYGNRILNQIRMLGDSVDWTRERF--TMDEGLSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             R ++  + + G IY+G Y   +  R      DDEV    +
Sbjct: 156 AVRKVFVDLYNGGYIYRGNYIINWCNRCHTALADDEVDHMPE 197


>gi|289553760|ref|ZP_06442970.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605]
 gi|289438392|gb|EFD20885.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis KZN 605]
          Length = 875

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 350 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 407

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 408 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 466

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 467 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 526

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 527 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 584

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 585 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 642

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 643 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 696

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 697 LTGRE---SLVSADWPEPSGISV 716



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 30  STKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 89

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 90  VEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R ++K++ D G IY+      +S   +   +D EV   
Sbjct: 148 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLEVNYR 190


>gi|325048883|dbj|BAJ79309.1| putative valyl-tRNA synthetase [Rhodococcus erythropolis]
          Length = 894

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 120/366 (32%), Gaps = 52/366 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++            +    I P  +      +V   + D  +SR+   W
Sbjct: 367 IEPRLSLQWWVKVETLAKAAGDAVRNGDTVIHPASQEPRWFDWVD-NMHDWCISRQ-LWW 424

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I +   P+                     ++  W  +     +T G+ DN      K
Sbjct: 425 GHRIPVWYGPEGEVACFGPDETAPEGWVQDPDVLDTWFSSGLWPFSTMGWPDNTP-ELEK 483

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS---------------ANLPLPKKVFSHGFILHK 299
           F+P  + V G DIL F       F                  A +P              
Sbjct: 484 FYPTSVLVTGYDILFFWVARMMMFGTYVSEDESITAGPGKSGAQMPFKDVFLHGLVRDQY 543

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  + 
Sbjct: 544 GKKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGEDSAQSSRN--FATKLF 601

Query: 360 NLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N    +    L +     P P     T++D  IL     V  E           +A   +
Sbjct: 602 N----ATKFALMNGAAPAPLPARSELTDADRWILDRLDTVQAEADAAFDRYEFSKACEGL 657

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +   D Y +  K       +   A+    V   V+  L  LL   +P +   ++ 
Sbjct: 658 FHFAWDEVCDWYLELAK--VQFAADEAVAANTRAVLGNVLDALLRLLHPVIPFVTETLWK 715

Query: 476 ILFVAD 481
           +L   +
Sbjct: 716 VLTGGE 721



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + DVL+R  R+ G +VL+  G D  G      
Sbjct: 46  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDVLSRRKRMQGYEVLWLPGMDHAGIATQSV 105

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 106 VEKQLAADGKTKEDFGRELFIDKVWDWKRESGGTIGGQMRRIGDGVDWSRDRF--TMDEG 163

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D+G IY+      +S   +   +D EV  
Sbjct: 164 LSRAVQTVFKRMFDEGLIYRAERLVNWSPVLQTAISDIEVKF 205


>gi|240850847|ref|YP_002972247.1| valyl-tRNA synthetase ValS [Bartonella grahamii as4aup]
 gi|240267970|gb|ACS51558.1| valyl-tRNA synthetase ValS [Bartonella grahamii as4aup]
          Length = 907

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 132/356 (37%), Gaps = 43/356 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++   +      +   +      +P   +    ++++  ++   +SR+   
Sbjct: 377 PIEPFLTDQWYVHAAELAKPAIEAVQQGKTRFVPDSWKKTYFNWME-NIQPWCISRQ-LW 434

Query: 216 WG--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTG 243
           WG  I     P                                ++  W  +     +T G
Sbjct: 435 WGHQIPAWYGPDGTVFVEKSEKEALDSAFAHYGEVVELIRDPDVLDTWFSSALWPFSTLG 494

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +      + F+P+ L V G DI+ F    +         ++P P           KG 
Sbjct: 495 WPNKTT-ELSTFYPSSLSVTGFDIIFFWVARMMMMGLHFMGDVPFPTVYVHALVRDQKGA 553

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN+IDP+E+I++   DALR+ L    A G+D   D   +      + A  + N 
Sbjct: 554 KMSKSKGNIIDPLELIDQYSADALRFTLAIMAAQGRDVKLDASRIAG--YRNFATKLWN- 610

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M    +D       A    +  IL+  S+ +  +   +++   + + A +   +
Sbjct: 611 ATRFAQMNGVKHDPTFKPEQAKLALNRWILTELSKTISAVTTGIEHYKFNESAATLYRFI 670

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP   +  N D  +     T  V+ ++  LL  F+P +  +++ 
Sbjct: 671 WNTLCDWYLELLKP-IFQGENEDAKNEAQACTAWVLDEVYKLLHPFMPHMTEELWS 725



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 21/170 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--- 64
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNTTIQDIIVRFQRMRGRNVLWQPGMDHAGIATQMVVERQLA 98

Query: 65  AGVTT--------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                                +  +      +    L +S D      T ++      R 
Sbjct: 99  ERQEPTRQEMGREKFIERIWEWRYETGGVIANQLRRLGVSCDWSRERFTMDEGLSQAVRE 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++  +  +G IY+      +  +     +D EV +     +      P++
Sbjct: 159 VFVTLYKQGLIYRDKRLVNWDPKLLTAISDLEVEQKEVQGHLWHFRYPLE 208


>gi|296127588|ref|YP_003634840.1| valyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296019404|gb|ADG72641.1| valyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 884

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 135/362 (37%), Gaps = 41/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    HN V+    + +F ++    +K           I P    N   +   + ++D  
Sbjct: 347 HCYRCHNVVEPYYSDQWFVKMKPLAEKAYKAVNDGNTKIYPERWINT-YNHWMTDIRDWC 405

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +     +
Sbjct: 406 ISRQ-LWWGHRIPVWYCDDCGEMMVSKTDITECSKCKSKNIHQDEDVLDTWFSSWLWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +  +  K  F+P    V G DIL F    +         ++P      +      
Sbjct: 465 TFGWPEVNEELK-YFYPTTALVTGYDILFFWVARMIMAGTHFMNDVPFKDVYLNGLIRDK 523

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANG 357
            G K+SKSLGN IDPIE+I+E G DA R+ L    + G +D + D++  K  +    AN 
Sbjct: 524 IGRKMSKSLGNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFK--MGGKFANK 581

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N        I  + D            D+ ILS   + + +  + ++      A   +
Sbjct: 582 IYNSAKYIFGSIEDNADIKDLDNYTLENKDKWILSRLQKAIDDTTKKLKEYRFDEASQTI 641

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +  K ++LK  +  +    + V + V+ +   ++  F+P +  +I+ 
Sbjct: 642 YKFYWNEFCDWYIEISK-FDLK--DESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYS 698

Query: 476 IL 477
            L
Sbjct: 699 NL 700



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I           H+GH     + D+L RFHR+ G   L+  GTD  G      
Sbjct: 34  KNKEPYSIVIPPPNVTGVLHMGHGLNNTLQDILIRFHRMLGKCTLWMPGTDHAGIATQNV 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T    +++        + +  S D      T ++   
Sbjct: 94  VERRLKAEGKNKYDLGREAFVKKTWEVANEHHSIIVKQLEKIGCSCDWERERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++ ++ ++G IY+G Y   Y         +DEV  
Sbjct: 154 NAVREVFVELYNQGLIYRGKYLINYCPSCGTALANDEVEH 193


>gi|206895183|ref|YP_002246881.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737800|gb|ACI16878.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 866

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 85/412 (20%), Positives = 160/412 (38%), Gaps = 50/412 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
                  +E  Y +          +    H  V+ M  + +F +L+A  D+     E+  
Sbjct: 321 KQIVQALEEQGYLEKVEPYKHAVGHCQRCHTVVEPMLSDQWFVKLTAMADEAKRVVETGE 380

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------- 221
             I+P  R  +V       ++D  +SR+   WG +IP                       
Sbjct: 381 VQIIPE-RWIKVYQDWMDNIRDWCISRQ-IWWGHRIPVYTCEECGYVFASEEETVEQCPK 438

Query: 222 -----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                     ++  W  +        G+ +  +  K  ++P  L + G DIL F    + 
Sbjct: 439 CGGPVKQEDDVLDTWFSSSLWPFEVFGWPEETEDLK-YYYPTSLLITGYDILFFWVARMI 497

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           + A  L+  +P  +       +   G+K+SKS GN +DP+++I+E   DALRY LV  ++
Sbjct: 498 FMATTLTGQIPFEEVFLHGLVLDEHGQKMSKSKGNTVDPMDMIDEYSADALRYALVSAMS 557

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
            G +D  + +  ++     +L N I N     +S++      +  TP  F+ +D  ILS 
Sbjct: 558 LGGQDVNFSESRVE--HGKNLTNKIWNSARYVLSVLEGK--QLDTTPNQFSIADRYILSR 613

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
             +  Q + E  +      AL ++ S       D Y +        K +P+   +  +  
Sbjct: 614 LEQTKQFVSECFEAYDFGAALREIESFYWSEYCDWYIEMS------KVDPNY--STYWTL 665

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHK 501
            EV+ Q   L   F+P +  +I+D +  ++      +  L + +     + K
Sbjct: 666 KEVLEQSLKLFHPFLPFVTQEIWDRMGHSNYLVEESWPKLSEHVVDEEAIEK 717



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + +  I           HIGHA ++ + D + R+ +++G +V +  GTD  G      
Sbjct: 34  KAKPRFSIVIPPPNVTGSLHIGHALDLSLQDAIVRYKKMNGFNVCWVPGTDHAGIATQNV 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHH 103
            + A                      + ++      D        + +D    T +    
Sbjct: 94  VERALLQQGIRRQDLGREVFLEKVWEWKERYGNTILDQITRLGCGVDWDRLRFTMDPVCA 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R  +K++ D+G IYKG Y   +  R     +D EV    +  +      P +  +
Sbjct: 154 RAVRRAFKELFDRGLIYKGHYMINWCPRCGTAISDLEVTYEEEDSHLWFIRYPFEDQK 211


>gi|229493187|ref|ZP_04386979.1| valyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229319918|gb|EEN85747.1| valyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 894

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 120/366 (32%), Gaps = 52/366 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++            +    I P  +      +V   + D  +SR+   W
Sbjct: 367 IEPRLSLQWWVKVETLAKAAGDAVRNGDTVIHPASQEPRWFDWVD-NMHDWCISRQ-LWW 424

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I +   P+                     ++  W  +     +T G+ DN      K
Sbjct: 425 GHRIPVWYGPEGEVACFGPDETAPEGWVQDPDVLDTWFSSGLWPFSTMGWPDNTP-ELEK 483

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLS---------------ANLPLPKKVFSHGFILHK 299
           F+P  + V G DIL F       F                  A +P              
Sbjct: 484 FYPTSVLVTGYDILFFWVARMMMFGTYVSEDESITAGPGKSGAQMPFKDVFLHGLVRDQY 543

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  + 
Sbjct: 544 GKKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGEDSAQSSRN--FATKLF 601

Query: 360 NLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           N    +    L +     P P     T++D  IL     V  E           +A   +
Sbjct: 602 N----ATKFALMNGAAPAPLPARSELTDADRWILDRLDTVQAEADAAFDRYEFSKACEGL 657

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +   D Y +  K       +   A+    V   V+  L  LL   +P +   ++ 
Sbjct: 658 FHFAWDEVCDWYLELAK--VQFAADEAVAANTRAVLGNVLDALLRLLHPVIPFVTETLWK 715

Query: 476 ILFVAD 481
           +L   +
Sbjct: 716 VLTGGE 721



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + DVL+R  R+ G +VL+  G D  G      
Sbjct: 46  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDVLSRRKRMQGYEVLWLPGMDHAGIATQSV 105

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 106 VEKQLAADGKTKEDFGRELFIDKVWDWKRESGGTIGGQMRRIGDGVDWSRDRF--TMDEG 163

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D+G IY+      +S   +   +D EV  
Sbjct: 164 LSRAVQTVFKRMFDEGLIYRAERLVNWSPVLQTAISDIEVKF 205


>gi|222636480|gb|EEE66612.1| hypothetical protein OsJ_23192 [Oryza sativa Japonica Group]
          Length = 960

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 127/364 (34%), Gaps = 27/364 (7%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  ++  E     +S  + L+ +++ 
Sbjct: 438 PERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARSAEEALAKAQEK 497

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
           +   ++I  DP  ++  W  +     +T G+ D        F+PA +   G DIL F   
Sbjct: 498 YGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSSEDFKHFYPATVLETGHDILFFWVA 556

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +       +  +P             +G K+SK+LGNVIDP++ I+E G DALR+ L  
Sbjct: 557 RMVMMGIEFTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTIKEYGTDALRFTL-S 615

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---- 387
               G+D     + L    N    N + N     +  +    D          + D    
Sbjct: 616 MGTAGQDLNLSTERLTS--NKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDTEAS 673

Query: 388 --------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                     +++    ++  +  +        A  ++         D Y +A K     
Sbjct: 674 LQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREIYDFFWGDFADWYIEASKTRLYH 733

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             +   +S    V + V   +  LL  F+P +  +++  L    +            P  
Sbjct: 734 SGDDSASSMAQSVLLYVFENILKLLHPFMPFVTEELWQALPYRKQAIIVAHW-----PAT 788

Query: 498 MLHK 501
            L K
Sbjct: 789 DLPK 792



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 24/161 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIA--DVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   I           H+GHA  + ++  D++ R+ R+ G   L+  GTD  G       
Sbjct: 85  DPFVIPMPPPNVTGSLHMGHAMFVTLSTQDIMVRYFRMKGRPALWLPGTDHAGIATQLVV 144

Query: 63  QN---------AGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +            +T + F  +                + +    D S + F  T +++ 
Sbjct: 145 EKMLAAEGIKRTDLTREEFTKRVWEWKEKYGSTITNQIKRLGASCDWSRERF--TLDEQL 202

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++ +KG IY+G Y   +S   +   +D EV  
Sbjct: 203 SRAVIEAFVRLHEKGLIYQGSYLVNWSPNLQTAVSDLEVEY 243


>gi|260426547|ref|ZP_05780526.1| valyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260421039|gb|EEX14290.1| valyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 1025

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 19/270 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I +  DP  ++  W  +    + T G+ +       K++P D+ V G+DIL F    W A
Sbjct: 587 IPVFRDPD-VLDTWFSSGLWPIGTLGWPEKTR-ELEKYFPTDVLVTGQDILFF----WVA 640

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L +  ++  H   LH      KG+K+SKSLGNV+DP+E+I+E G DALR+    
Sbjct: 641 RMMMMQLAVVDEIPFHTVYLHGLVRDAKGKKMSKSLGNVVDPLEIIDEYGADALRFTNAA 700

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G     D   +      +    + N    +         G +P P A    +  IL
Sbjct: 701 MASLGGVLKLDMQRIAG--YRNFGTKLWNAARFAEMNGAVGLGGGVPAPQAT--VNRWIL 756

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
              +RV + +   M     + A   + + V     D Y +  KP  L+  +    +    
Sbjct: 757 GETARVREAVDAAMAEYRFNDAAQALYAFVWGVVCDWYVEFSKP-LLQGEDAAAKAETQA 815

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV 479
               VI Q  ILL   +P +  +++  L  
Sbjct: 816 TMSWVIDQCLILLHPIMPFITEELWATLGT 845



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 58/183 (31%), Gaps = 30/183 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFSIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGYDTLWQPGQDHAGIATQMVVER 95

Query: 64  ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDF---IRTTE 99
                              T K++  +           + +    D S + F      + 
Sbjct: 96  ELAKDPSNATRREMGREAFTAKIWEWKQQSGGTIINQLKRLGASCDWSRNAFTMSGAESA 155

Query: 100 K-----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++  + +KG IY+G     +    E   +D EV       +     
Sbjct: 156 PAGEDGNFHDAVIKVFVDMYEKGLIYRGKRLVNWDPHFETAISDLEVENLEVAGHMWHFK 215

Query: 155 NPV 157
            P+
Sbjct: 216 YPL 218


>gi|218282236|ref|ZP_03488535.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
 gi|218216774|gb|EEC90312.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
          Length = 870

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 149/376 (39%), Gaps = 35/376 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F ++    +++L   E   +       R N+        ++D  +SR+   
Sbjct: 350 VEPYLSKQWFVKMKPLAEEVLKNQEIEDQRINFVPSRFNKTFEQWLENIEDWCISRQ-LW 408

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+ +      
Sbjct: 409 WGHRIPAWTNKETGEIYVGMEDPKDIENWKQDEDVLDTWFSSALWPFSTLGWPETTA-DL 467

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +       N P    +        +G K+SKSLGN 
Sbjct: 468 ERYFPNDVLVTGYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVRDTQGRKMSKSLGNG 527

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI+E G DALR+FL      G+D  +D+  +    N    N I N  +R V M +
Sbjct: 528 IDPMDVIQEKGADALRFFLTTNSTPGQDLRFDETKMDASWN--FINKIWN-AARYVQMQI 584

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            D    +    A +  D+ IL+  + VL  +  NM    +     ++ S V +     Y 
Sbjct: 585 GDTKPELDMTKANS-VDKWILARFNEVLDHVSTNMDKYELAIVGNELYSFVWDDFCSWYI 643

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +    +    V   V+  +  +L  F+P +  +I+  L    E+   ++
Sbjct: 644 ELSKA-TLYSEDESLVANTKAVLYTVMMGILKVLSPFMPFVTEEIYLNLPHDKESLNVET 702

Query: 489 LDQRLKPGFMLHKTFD 504
             ++++  +   +  +
Sbjct: 703 WPEKVEFEYADAEKDE 718



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 19/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I         + H+GHA++  + D+L R+ RL G DV +  G D  G       
Sbjct: 32  SKRPYCIVIPPPNVTGKLHLGHAWDTTLQDILCRYKRLKGYDVCWVAGMDHAGIATQAKV 91

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                +                   + ++ +   R     L +S D      T +     
Sbjct: 92  DARLKSEGISRYDIGREKFLERAWEWKEEYASTIRSQWAKLGLSLDYSRERFTLDDGLSH 151

Query: 105 TCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R ++  +   G IY+G     W      A  N + V+K   G  Y  ++  V+  +E
Sbjct: 152 AVRKVFVDLYKDGLIYQGERIINWDPEAKTALSNIEVVHKEIMGHMYYFKYKVVETGQE 210


>gi|296444651|ref|ZP_06886615.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257919|gb|EFH04982.1| valyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 904

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 129/368 (35%), Gaps = 51/368 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L+         +P         +++  ++   +SR+   W
Sbjct: 374 LEPRLTDQWYVDAKTLAQPALAAVREGRTHFVPKNWEKTYFDWLE-NIQPWCVSRQ-LWW 431

Query: 217 G--IKIPDD------------------------------PQYIMYVWIDALTNYLTTTGY 244
           G  I    D                               + ++  W  +     +T G+
Sbjct: 432 GHRIPAWYDADGNVFVEESEEEALAAARARLGRDVALTRDEDVLDTWFSSALWPFSTLGW 491

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL------H 298
            D       +F+P ++ V G DI+ F    W A ++   L   K+V  H   +       
Sbjct: 492 PDETK-ELERFYPTNVLVTGFDIIFF----WVARMMMMGLYFKKEVPFHDVYIHALVRDE 546

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K+SKS GNVIDP+ +I + G DALR+ L    A G+D       ++     + A  +
Sbjct: 547 KGAKMSKSKGNVIDPLHLINDYGADALRFTLAAMAAQGRDIKLATQRVEG--YRNFATKL 604

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N    +         G  P     T  +  I+S  +R  +EI   ++    + A     
Sbjct: 605 WNASRFAEINGCARVPGYDPARNEIT-LNRWIVSEAARAAEEIGAAIEAYRFNDAAGAAY 663

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             V     D Y +  KP  L+  +              + Q+  LL  F+P L  +++ +
Sbjct: 664 RFVWNVFCDWYLELAKP-LLQGEDGAAKDETRAAAAFTLDQIYALLHPFMPFLTEELWGV 722

Query: 477 LFVADENR 484
             +    R
Sbjct: 723 KGLEGPPR 730



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 22/177 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+LAR+ R+ G DVL+  GTD  G       + 
Sbjct: 35  EPFSIVIPPPNVTGSLHMGHALNNTLQDILARYQRMRGRDVLWQPGTDHAGIATQMVVER 94

Query: 65  AGVTTKV--------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
             +  +               +  +           + +    D S + F  T ++    
Sbjct: 95  KLMERQQHRRELGREKFLEEVWAWKAESGGVIVEQLKRLGASCDWSRERF--TLDEGLSR 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               ++ ++   G IYK      +  +     +D EV +     +      P+ + +
Sbjct: 153 AVAKVFVQLHRDGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGHLWHFRYPIVYQD 209


>gi|83593131|ref|YP_426883.1| valyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83576045|gb|ABC22596.1| Valyl-tRNA synthetase, class Ia [Rhodospirillum rubrum ATCC 11170]
          Length = 879

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 127/357 (35%), Gaps = 43/357 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F   +    + +   E      +P    N    +++  ++   +SR+   W
Sbjct: 352 IEPWLTDQWFVDAAKLAVEPIRAVEEGRTRFVPKHWENTFFEWMR-NIQPWCISRQ-IWW 409

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  +     P                                ++  W  +     +T G+
Sbjct: 410 GHQVPAWYGPDGTIFVEETEDEARTAAHDHYGVATELTRDTDVLDTWFSSALWPFSTLGW 469

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            D      A+++P D+ V G DI+ F    +      +  ++P             KG+K
Sbjct: 470 PDQTP-ELARYYPGDVLVTGFDIIFFWVARMMMMGHYVMGDVPFRDVYIHALVRDEKGQK 528

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP+++ ++ G DALR+ L+   A G+D    +  +      +    + N  
Sbjct: 529 MSKSKGNVIDPLDMTDQYGTDALRFTLIAMAAQGRDIKMSEQRVAG--YRNFCTKLWN-A 585

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M       +     A    +  I +       ++ E ++    + A       V 
Sbjct: 586 ARFCQMNDCLPQPVFDPTTARHTLNRWIGAKTEDCAAKVAEAIEAYRFNDAAQVAYGFVW 645

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +  KP  L+  +    +    +   V+  +  +L   +P +  ++++ +
Sbjct: 646 NTFCDWYLEMAKP-ILQGEDGVTKAETQAMAAWVLDTILHILHPMMPFITEELWEKI 701



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 50/175 (28%), Gaps = 18/175 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D L R+HR+ G D L+  G+D  G       + 
Sbjct: 34  QPYTIMMPPPNVTGSLHMGHALTFTLQDTLIRYHRMSGRDALWQPGSDHAGIATQMVVER 93

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +   +    +     L  S D      T +       
Sbjct: 94  QLAGKGITRHDLGREAFISKVWEWKAHSGGTIQRQLRRLGASPDWPRERFTMDDGLSKAV 153

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           R ++ ++   G IY+      +        +D EV +            PV   +
Sbjct: 154 RKVFVRLHKDGLIYRDKRLVNWDPVLHTAISDLEVEQRETKGKLWHLRYPVDGQK 208


>gi|46579145|ref|YP_009953.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81405042|sp|Q72E47|SYV_DESVH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46448558|gb|AAS95212.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232983|gb|ADP85837.1| valyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 884

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 137/400 (34%), Gaps = 25/400 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAY 172
              G  Y+        + ++ +    ++   A           P  WM+    +F     
Sbjct: 342 HSVGHCYRCKTVVEPHMSEQWFVASTKLAPRARAAVPQMTQIFPESWMKT---YFNWLDN 398

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                   +      +P     +    + S     +           +  DP  ++  W 
Sbjct: 399 IRDWCISRQIWWGHRIPAWTCGKCGKLIVSEQDPTACPDCGCT---DLTQDPD-VLDTWF 454

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +     +T G+ D      A F+P  + V G DIL F    W A ++   +    +V  
Sbjct: 455 SSALWPFSTMGWPDKTK-DLATFYPTSVLVTGFDILFF----WVARMMMLGMHFMDEVPF 509

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
               LH      +G K+SKS GNVIDP+ +I++ G D+LR+ L    A G+D    +D +
Sbjct: 510 KHVYLHALVRDGEGRKMSKSTGNVIDPLAMIDKYGTDSLRFTLAAFAAMGRDIKLSEDRI 569

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +        N + N    S+  + ++    +          + IL     +       + 
Sbjct: 570 EG--YRHFVNKVWNAARFSLMNLPEEAPAALDLDNVKGMHHKWILHRLEELKASQAAGID 627

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               +     +         D Y +  KP        +R +T  YV   V+R+  +LL  
Sbjct: 628 GYRFNEVAQGLYRFWWNEFCDWYLELIKPDMQAGG--ERQATAQYVLWTVLREALLLLHP 685

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           F+P +  +++  L     +     L    +PG    K  +
Sbjct: 686 FMPFVTAEVWQALPGHAGDDIATKLYPAARPGCRDVKDAE 725



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA   ++ DVL R  R  G  VL+  GTD  G       + 
Sbjct: 38  EPYSIVIPPPNVTGALHIGHALNHVLIDVLCRNARQQGKKVLWLPGTDHAGIATQNVVER 97

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A                        + + ++     R + D +D + + F  T ++    
Sbjct: 98  ALAKEGLSRHDLGREAFIERVWQWKEEYGNRILNQIRMLGDSVDWTRERF--TMDEGLSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             R ++  + + G IY+G Y   +  R      DDEV    +
Sbjct: 156 AVRKVFVDLYNGGYIYRGNYIINWCNRCHTALADDEVDHMPE 197


>gi|83854681|ref|ZP_00948211.1| valyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842524|gb|EAP81691.1| valyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 978

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 139/355 (39%), Gaps = 44/355 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F   S      +    +    ILP + R    +++K  ++   +SR+   W
Sbjct: 448 IEPMLTDQWFVETSKIVQPAIDAVRNGEVQILPEQDRKVYFNWLK-NIEPWCISRQ-LWW 505

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I +  D +                          ++  W  +    + T G+ +  D
Sbjct: 506 GHQIPVWFDDEGKEYCAATEAEAQAMAPGKTLTRDPDVLDTWFSSGLWPIGTLGWPEQTD 565

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              AK++P  + + G DI+ F    +    + +    P             KG+K+SKSL
Sbjct: 566 -ELAKYFPTSVLITGFDIIFFWVARMMMMQYAVVDQKPFDTVYVHALVRDEKGKKMSKSL 624

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+DP+++I+E G DA+R+ L    A G+D       +      +    + N   R   
Sbjct: 625 GNVLDPLDLIDEYGADAVRFTLTAMAAMGRDLKLSTARIAG--YRNFGTKLWN-AHRFAE 681

Query: 368 MILKDYDGMIP-TPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           M     D +   T  + T+ D    + I+   +RV +E+   + N   + A   + + V 
Sbjct: 682 MNGVFEDSVAAVTYTSHTQVDHTLNKWIIGETARVREEVDAALDNYRFNDAANALYAFVW 741

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               D Y +  KP  L + +   A+        V+ Q  +LL   +P +  +++ 
Sbjct: 742 GKVCDWYVELSKP--LLQDDAPEAAETRQTLKWVLDQCLVLLHPIMPYITEELWQ 794



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 29/182 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   +           H+GHA+   + D+L R+HR+ G D L+  G D  G      
Sbjct: 33  SRKETFSVMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMV 92

Query: 62  AQNA---------GVTTKVFVDQNSRNF-----------RDMADVLDISYDDFIRTTEK- 100
            +             T + F  +                + +   LD S + F  +    
Sbjct: 93  VERELAKDGKRRTDFTREDFTAKVWEQKQKSGGTIIGQLKRLGTSLDWSRNAFTMSGAPG 152

Query: 101 -------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNA 152
                    HD    ++  + +KG IY+G     +    E   +D EV     DG  ++ 
Sbjct: 153 APAGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVESTEVDGHMWHF 212

Query: 153 QH 154
           ++
Sbjct: 213 KY 214


>gi|229167050|ref|ZP_04294794.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228616403|gb|EEK73484.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 1033

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 144/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTTE         + +      D  K         R   +    E     +        
Sbjct: 404 IRTTE---------IKETFLRNNDSVKWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFSPKSIAELRKHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    NP++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|317127808|ref|YP_004094090.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315472756|gb|ADU29359.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 1030

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 72/452 (15%), Positives = 159/452 (35%), Gaps = 17/452 (3%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTK--VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +G D       K      +      F          +     + +          H   C
Sbjct: 331 SGLDFVNIVDEKGCYTDDIKPLAGEFTKDCDVKIIKLLSDEGLLFSKEKYEHSYPHCWRC 390

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                  + +G   +       ++       +       DG++     N V W      +
Sbjct: 391 DSPLIYYAMEGWFIR-TTEIKETILKNNQTVEWHPDHMKDGRFGKFLENMVDWNLGRNRY 449

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNE---VISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +               +    +   + N    ++  ++     +           K    
Sbjct: 450 WGTPLNVWVCEECNHQYVPGSIQDLKVNAKSGMVENLELHKPYVDEVIVECPCCSKDMRR 509

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
            + ++ VW D+ +       Y         K +PAD+   G D     F+++   + L +
Sbjct: 510 TKEVIDVWFDSGSMPFAQYHYPFENKQMFHKQFPADVIAEGVDQTRGWFYSLLTVSSLFT 569

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  + +     +   G K+SKS GNVIDPI++++  G DALR+ L+ + A   +  +
Sbjct: 570 GKAPYKRVLSLGHILDEDGRKMSKSKGNVIDPIDLVKNYGADALRWALLADSAPWNNKRF 629

Query: 342 DKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             + +  +  + L + + ++ S  ++   +  +D      G  +  D+ +LS  + V + 
Sbjct: 630 S-ENVVSQAKSKLVDTLNHVHSFYTLYAEIDGFDPNKHEQGERSLLDKWVLSRLNTVTKN 688

Query: 401 IRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++E++ N        ++  LV +V + Y     ++ W  +  N D+ +   +   +V+ +
Sbjct: 689 VKEHLDNYDFTAGAREISLLVDQVSNWYIRRSRERFWS-EGLNDDKLAA-YHTLFKVLVR 746

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           ++ LL  F P +A  I   L +  E+      
Sbjct: 747 ISRLLAPFTPFIAEDI--HLNLTSESVHLSDF 776



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+           N  PH GH    +I D +AR+  + G  V+   G D HG  +   
Sbjct: 35  EGRKTFVFYEGPPTANGLPHAGHVLGRVIKDFVARYQTMRGHQVIRKAGWDTHGLPVELG 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +R   + +   +  D+   T    +
Sbjct: 95  VEKKIGVSGKQEIEEYGVENFINECKKSVFDYEKQWRKFTEAIGYWVDMDNPYVTLNNDY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +  KI +KG +Y+G     Y    +   +  EV +G  
Sbjct: 155 IESVWYVLSKIHEKGLLYRGHRVTPYCPSCQTSLSSHEVAQGYK 198


>gi|90424069|ref|YP_532439.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106083|gb|ABD88120.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 952

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D+    K +++P ++ V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDDDTDCK-RYYPTNVLVTGFDIIFFWVARMMMMGLHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D   
Sbjct: 551 DDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N  SR   M             A    +  I     R ++E+
Sbjct: 611 ASSRVEG--YRNFATKLWNS-SRFAEMNACALPADFDPTAAKQTLNRWIAHETVRAVREV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E ++    + A       V     D Y +  KP  L + +P +A T   +      ++ 
Sbjct: 668 TEAIEAYRFNDAAGAAYRFVWNVYCDWYLELAKPVLLGEDSPAKAET-RAMVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P +  +++
Sbjct: 727 KLLHPFMPFITEELW 741



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 23/177 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +  
Sbjct: 37  PFSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQ 96

Query: 66  GVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +               V Q             + +    D S + F  T ++    
Sbjct: 97  LMERQEPSRRDMGREKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDEGLSR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               ++ ++  +G IYK      +  +     +D EV +            P+  +E
Sbjct: 155 AVAKVFVELHRQGLIYKDKRLVNWDPKLLTAISDLEVQQVEVKGNLWHLRYPLDGVE 211


>gi|218199135|gb|EEC81562.1| hypothetical protein OsI_25003 [Oryza sativa Indica Group]
          Length = 958

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 127/364 (34%), Gaps = 27/364 (7%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  ++  E     +S  + L+ +++ 
Sbjct: 436 PERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARSAEEALAKAQEK 495

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
           +   ++I  DP  ++  W  +     +T G+ D        F+PA +   G DIL F   
Sbjct: 496 YGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSSEDFKHFYPATVLETGHDILFFWVA 554

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +       +  +P             +G K+SK+LGNVIDP++ I+E G DALR+ L  
Sbjct: 555 RMVMMGIEFTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTIKEYGTDALRFTL-S 613

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---- 387
               G+D     + L    N    N + N     +  +    D          + D    
Sbjct: 614 MGTAGQDLNLSTERLTS--NKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDTEAS 671

Query: 388 --------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                     +++    ++  +  +        A  ++         D Y +A K     
Sbjct: 672 LQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREIYDFFWGDFADWYIEASKTRLYH 731

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             +   +S    V + V   +  LL  F+P +  +++  L    +            P  
Sbjct: 732 SGDDSASSMAQSVLLYVFENILKLLHPFMPFVTEELWQALPYRKQAIIVAHW-----PAT 786

Query: 498 MLHK 501
            L K
Sbjct: 787 DLPK 790



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D++ R+ R+ G   L+  GTD  G       + 
Sbjct: 85  DPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYFRMKGRPALWLPGTDHAGIATQLVVEK 144

Query: 65  ---------AGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                      +T + F  +                + +    D S + F  T +++   
Sbjct: 145 MLAAEGIKRTDLTREEFTKRVWEWKEKYGSTITNQIKRLGASCDWSRERF--TLDEQLSR 202

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ +KG IY+G Y   +S   +   +D EV  
Sbjct: 203 AVIEAFVRLHEKGLIYQGSYLVNWSPNLQTAVSDLEVEY 241


>gi|254714044|ref|ZP_05175855.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716899|ref|ZP_05178710.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261218703|ref|ZP_05932984.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261321799|ref|ZP_05960996.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260923792|gb|EEX90360.1| valyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294489|gb|EEX97985.1| valyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 910

 Score =  173 bits (438), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 130/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALIRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    + V   
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEVQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|318040771|ref|ZP_07972727.1| valyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 935

 Score =  173 bits (438), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 89/411 (21%), Positives = 148/411 (36%), Gaps = 78/411 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E+     +P  R ++V     + ++D  +SR+   
Sbjct: 363 PVEPLLSTQWFVKTEPLAARCREALENADPRFVPE-RWSKVYRDWLTDIRDWCISRQ-LW 420

Query: 216 WGIKIP-----------------------------------------------DDPQYIM 228
           WG +IP                                                DP   +
Sbjct: 421 WGHRIPAWFVVSETGGAITDTTPYVVARNEAEARQKAEAQFSGGTHAHPVVLEQDPDA-L 479

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPL 286
             W  +     +T G+ +       +++P  + V G DI+ F    +   A   +  +P 
Sbjct: 480 DTWFSSGLWPFSTLGWPNAEAADLQRWYPTSVLVTGFDIIFFWVARMTMMAGAFTGQMPF 539

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG 345
                          K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D 
Sbjct: 540 QDVYIHGLVRDENNRKMSKSAGNGIDPLLLIDRYGADALRFALVREVAGAGQDIRLDYDR 599

Query: 346 LKK-----RVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRV 397
                     + + AN + N V+R   M L          P P A   +D  ILS  +RV
Sbjct: 600 KSDTSATVEASRNFANKLWN-VTRFALMNLDGETPASLGEPDPAALQLADRWILSRLARV 658

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-----PWELKKTNPDRA----ST 446
            +E  E   N  +  A   +         D Y +  K     P +L     + A     T
Sbjct: 659 NRETAERYGNYGLGEAAKGLYEFAWNEVCDWYVELIKRRLQVPADLDGAAREAALADQRT 718

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQR 492
              V  + + +L ++LQ  +P L  +++  L  A E      + +  LD+ 
Sbjct: 719 ARQVLAKALNELLVMLQPLMPHLTEELWHGLTGAGEETFLALQPWPQLDEA 769



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 19/169 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 43  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLRGKNVLCLPGTDHASIAVQTILEK 102

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  Q+          L  S D      T +    +  
Sbjct: 103 QLKADGKRKEDLGREAFLEKAWEWKAQSGGTIVGQLRRLGYSVDWQRERFTLDAGCSEAV 162

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
              + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 163 IEAFNRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 211


>gi|288958149|ref|YP_003448490.1| valyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910457|dbj|BAI71946.1| valyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 884

 Score =  173 bits (438), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 138/372 (37%), Gaps = 51/372 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++   +      +   E+     +P +  N    +++  ++   +SR+   W
Sbjct: 354 IEPWLTDQWYVDAATLAKPAIEAVETGKTVFVPKQWENTYFEWMR-NIQPWCISRQ-IWW 411

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 412 GHQIPAWYGPDGAFFVEETEEEARAAAAKHYGKDVELTRDADVLDTWFSSALWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL------H 298
            D       +++P D+ V G DI+ F    W A ++   L   K V      +       
Sbjct: 472 PDQTP-ELDRYYPTDVLVTGFDIIFF----WVARMMMMGLHFMKDVPFRTVYIHALVRDE 526

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG+K+SKS GNVIDP+E+I++ G DALR+ L    A G+D     + ++     + A  +
Sbjct: 527 KGQKMSKSKGNVIDPLEIIDQYGTDALRFTLSAMAAQGRDIKLAVNRVEG--YRNFATKL 584

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M   +        G     +  I+   +   +++ +++     + A     
Sbjct: 585 WN-AARYCQMNGCEPVAGYRPVGLTQTVNRWIVGALADAAKKVADSVDAYKFNEAAGAAY 643

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  KP  L  T+    +     T  V+ Q+  +L   +P +  ++++ 
Sbjct: 644 QFTWGTFCDWYMEFTKP-ILAGTDEAAKAETRATTAWVLDQILHILHPLMPFITEELWEQ 702

Query: 477 LFVADENRCFQS 488
           L  A  NR   +
Sbjct: 703 LSPARGNRLISA 714



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 52/172 (30%), Gaps = 18/172 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    I DVL R++R+ G D L+  GTD  G       + 
Sbjct: 36  KPYTIMMPPPNVTGSLHMGHALTFTIQDVLTRYNRMRGRDALWQPGTDHAGIATQMVVER 95

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++          L  S D      T +       
Sbjct: 96  NLAKDGKTRHDFGRDAFIDKVWEWKAESGGTITRQLRRLGASPDWPRERFTMDDGLSRAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           R ++ ++  +G IYK      +  +     +D EV +            P+ 
Sbjct: 156 RKVFVELHRQGLIYKDKRLVNWDPKLHTAISDLEVEQKEIKGNLWHFRYPID 207


>gi|289448092|ref|ZP_06437836.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A]
 gi|289421050|gb|EFD18251.1| valyl-tRNA synthase valS [Mycobacterium tuberculosis CPHL_A]
          Length = 876

 Score =  173 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 351 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 408

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 409 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 467

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 468 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 527

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 528 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 585

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 586 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEDVRAEVDSAFDGYEFSRACESLYH 643

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 644 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 697

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 698 LTGRE---SLVSADWPEPSGISV 717



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 31  STKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 90

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 91  VEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R ++K++ D G IY+      +S   +   +D EV   
Sbjct: 149 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLEVNYR 191


>gi|260187457|ref|ZP_05764931.1| valyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 886

 Score =  173 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 127/383 (33%), Gaps = 55/383 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 419 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 538 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 596 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEDVRAEVDSAFDGYEFSRACESLYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 654 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 707

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           L   +      S D     G  +
Sbjct: 708 LTGRE---SLVSADWPEPSGISV 727



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 41  STKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 101 VEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R ++K++ D G IY+      +S   +   +D EV   
Sbjct: 159 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLEVNYR 201


>gi|254706849|ref|ZP_05168677.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710043|ref|ZP_05171854.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031538|ref|ZP_05445152.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159673|ref|ZP_05457426.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254941|ref|ZP_05460477.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222125|ref|ZP_05936406.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314312|ref|ZP_05953509.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317591|ref|ZP_05956788.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|265988625|ref|ZP_06101182.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998090|ref|ZP_06110647.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920709|gb|EEX87362.1| valyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261296814|gb|EEY00311.1| valyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303338|gb|EEY06835.1| valyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|262552558|gb|EEZ08548.1| valyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660822|gb|EEZ31083.1| valyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 910

 Score =  173 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 130/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    + V   
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEVQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|302560654|ref|ZP_07312996.1| valyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302478272|gb|EFL41365.1| valyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 874

 Score =  173 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 129/362 (35%), Gaps = 37/362 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ +++                I P E   +        L D  
Sbjct: 354 HCSRCKTTIEPRLSLQWWVKVAPLAKAAGDAVRDGRVKIHPQE-MEKRYFDWVDNLHDWC 412

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 413 ISRQ-LWWGHRIPVWYGPNGEIVCVGPDDEAPTGEGWHQDTDVLDTWFSSGLWPFSTLGW 471

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  + S AKF+P  + V G DIL F     + +  + +    P              G+
Sbjct: 472 PEQTE-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGK 530

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN ++P++ +++ G DALR+ L R    G D    +D ++   N   AN I N 
Sbjct: 531 KMSKSFGNAVNPLDWMDKYGSDALRFTLARGANPGVDVPIGEDWVQGSRN--FANKIWN- 587

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M      G +P   A + +D  ILS  + V+ E+     +    +    +    
Sbjct: 588 ATRFALMNGATVQGPLPDASAMSSTDRWILSRLNSVVAEVDAYYDDFQFAKLSDALFHFA 647

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K        P   S    V  EV+     LL   VP +   ++  L  
Sbjct: 648 WDEVFDWYVELSKTTFQAGGEPAEVS--KRVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 705

Query: 480 AD 481
            +
Sbjct: 706 GE 707



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    +           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 45  SDKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGFETLWQPGMDHAGIATQNV 104

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + D +  S + F  T ++ 
Sbjct: 105 VERELGKEGKSRHDLGREAFIERVWQWKGESGGQISGQMRRLGDGVAWSRERF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D   IY+      +  R     +D EV    D
Sbjct: 163 LSTAVQTIFKRLYDDELIYRAERIINWCPRCLTAISDIEVDYQED 207


>gi|237756572|ref|ZP_04585094.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691272|gb|EEP60358.1| valyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 768

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 74/350 (21%), Positives = 139/350 (39%), Gaps = 21/350 (6%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           + +  +D +    D  + + +   +++ E+  +  + S ++ K  S  +         + 
Sbjct: 241 QIFCVEDVLSILKDKNFTHPEKTNLEFYEKIVFGEKTSQFESKD-SLIKLLENSDKFEKV 299

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
            NE                     G +     + ++  W  +      T G+    D   
Sbjct: 300 YNERYKIKLK----------CEKCGSENLHQEEDVLDTWFSSALWPFGTLGWPSRKD-DL 348

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           A F+P  L V G DI+ F    +       + ++P             KGEK+SK+ GNV
Sbjct: 349 AVFYPTSLLVTGFDIIFFWVARMIMMGTKFTNDVPFKDVYIHALVRDEKGEKMSKTKGNV 408

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+E+ E+ G DALR+ L    A G+D    +  ++       +N I N  S+ V +  
Sbjct: 409 IDPLEMAEKYGSDALRFTLASLAAQGRDIRLSEKRIEG--YKHFSNKIWN-ASKFVLINS 465

Query: 371 KDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +DYDG       + +  D  IL+  ++ ++   + ++N   +     +         D Y
Sbjct: 466 EDYDGKANLESLSLSIEDYWILTKLNKTIENSTKELENYRYNEYANILYDFFWHDYCDWY 525

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   + K +P+   T L V   V+R+   LL   +P +  +I+  L
Sbjct: 526 IELSK-ERIYKGSPEEKKTALTVLNFVLRESLKLLHPIMPYITEEIYGYL 574


>gi|271968521|ref|YP_003342717.1| valyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270511696|gb|ACZ89974.1| valyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 861

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 119/360 (33%), Gaps = 40/360 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      +F  +S                I P E   +        + D  
Sbjct: 347 HCSRCKTVVEPRLSLQWFVNVSPLAKAAGDAVRDGQTRIHPPE-LAKRYFDWVDDMHDWC 405

Query: 209 LSRKTFDWG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLD 246
           +SR+   WG  I +   P                      ++  W  +     +T G+ D
Sbjct: 406 ISRQ-LWWGHRIPVWYGPAGEVVCVGPDEESPAGYVQDPDVLDTWFSSGLWPFSTLGWPD 464

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                 AKF+P  + V G DIL F     + +  + +    P              G+K+
Sbjct: 465 KTP-ELAKFYPTSVLVTGYDILFFWVARMMMFGIYAMDGRPPFRTVALHGMVRDQYGKKM 523

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP++ +E  G DA R+ L+R    G D    ++      + +  N I N  +
Sbjct: 524 SKSFGNVVDPLDWVERFGADATRFTLLRGANPGSDVAISEEW--AGGSRNFCNKIWN-AT 580

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   M       +       T +D  ILS    V+  +    ++    +    +     +
Sbjct: 581 RFALMNGAAVGELPV--EELTAADRWILSRLQEVVASVDAAFEDFEFAKVSDLLYHFAWD 638

Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D Y +  K          R      V   V   L  LL   VP +  +++  +   +
Sbjct: 639 EVCDWYVELAKIQIASGQEHTRL-----VLGHVFDSLLRLLHPLVPFVTEELWRAVTGGE 693



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ERE   I           HIGHA +  I D L R  R+ G + L+  G D  G      
Sbjct: 38  SEREPYSIVLPPPNVTGVLHIGHALDHSIQDALTRRARMRGQETLWLPGMDHAGIATQNV 97

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          +    +     R + D +D S + F  T +  
Sbjct: 98  VEREIAKDGLSRHDLGREAFVERVWQWKEESGGRILGQMRKLGDGVDWSRERF--TMDPG 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D G IY+      +  R     +D EV    D
Sbjct: 156 LSRAVQTIFKKLFDDGLIYRAERIINWCPRCLTALSDIEVEHSED 200


>gi|229043950|ref|ZP_04191644.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228725390|gb|EEL76653.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 607

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 139/344 (40%), Gaps = 20/344 (5%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E     +         P+   E E        +  K ++    +     P     E +  
Sbjct: 11  ENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIAELRKNSTKETP-----EDLEL 62

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            K  + ++ +       G  +   P+ ++ VW D+ +       Y         + +PAD
Sbjct: 63  HKPYVDEVQVCCGK--CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPAD 119

Query: 260 LHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +   G D     F+++   + L +  +P  + +     +  +G+K+SKS GN +DP++++
Sbjct: 120 VIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLV 179

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGM 376
           ++ G DALR+ L+ + A      + +  + +   +   + + N+ S   +   L +Y+  
Sbjct: 180 DKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPK 238

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKP 433
                  T+ DE +LS      +++R  + +     A  ++ +LV EV + Y      + 
Sbjct: 239 ETYDVKLTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRF 298

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           WE    N ++A+       EV+  ++ L+  F P +A  I   L
Sbjct: 299 WE-SGMNAEKAAA-YETLHEVLVTISKLIAPFTPFVAEDIHLNL 340


>gi|270307798|ref|YP_003329856.1| valyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153690|gb|ACZ61528.1| valyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 880

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 85/365 (23%), Positives = 143/365 (39%), Gaps = 52/365 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ M  + +F ++       L    S    ILP  R  +V       ++D  
Sbjct: 350 HCQRCSAVIEPMVSKQWFVKMEPLAKPALEAVNSGRIQILPE-RFTKVYQNWMENIRDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I +   P                           ++  W  +     +T
Sbjct: 409 ISRQ-LWWGHRIPVWYCPCGEMIVSKEDPTACPKCGCTQLEQDPDVLDTWFSSGLWPHST 467

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--- 298
            G+ D  +  K +F+P  +     DI+ F    W A ++   +   K+V      LH   
Sbjct: 468 LGWPDQTEDLK-RFYPGSVLETAYDIIFF----WVARMIVMGIEDMKEVPFRTVYLHGLI 522

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              KGEK+SK+ GNVIDP++VI++ G DALR+ +    + G D    +  L+   N   A
Sbjct: 523 RDDKGEKMSKTKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FA 580

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N + N  SR V M L +   ++P        D  ILS  +RV  ++   M+      A  
Sbjct: 581 NKLWN-ASRFVIMNLGEGKELLP-EAELPLEDRWILSRMNRVTADVTRLMEEFQFGEAQR 638

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANK 472
            +   +     D Y +  K         D AS     V V+V+  +  LL  ++P +  +
Sbjct: 639 ILQDFIWGEFCDWYIELAKVRL-----RDEASVSPRPVLVKVLSTILRLLHPYMPFITEE 693

Query: 473 IFDIL 477
           ++  L
Sbjct: 694 LWSYL 698



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I         + H+GHA    + D++ R+HR+ G   L+  G D  G      
Sbjct: 39  SDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMLGEPALWLPGADHAGIAAQVV 98

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        +V+      R     L  S  +D    T ++   
Sbjct: 99  VERELAKQGKTRQELGRELFLEKMWEWVNPCRERIRHQHMRLGASCDWDRETFTLDEGPV 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + +KG IY+G     +  R     +D EV       +      P++
Sbjct: 159 KAVREIFTNLYEKGLIYRGERIINWCPRCATAVSDLEVDHKDLAGHIWHLRYPLE 213


>gi|83951105|ref|ZP_00959838.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83839004|gb|EAP78300.1| valyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 964

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 70/316 (22%), Positives = 119/316 (37%), Gaps = 15/316 (4%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW----GIKIPDDPQYIMY 229
              L   E               + F + G +  + +          G+ +  DP  ++ 
Sbjct: 479 YHWLENIEPWCISRQLWWGHQIPVWFDEEGHQYCAPTEAEAQAQAGEGVTLTRDPD-VLD 537

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +    + T G+ +  +    +++P    V G+DIL F    +      +   +P  
Sbjct: 538 TWFSSGLWPIGTLGWPEETE-EYKRYFPTSTLVTGQDILFFWVARMMMMQLAVVDQVPFD 596

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                      KG+K+SKS GNVIDP+E+I+E G DALR+      + G     D   + 
Sbjct: 597 TVYLHGLVRDAKGKKMSKSTGNVIDPLEIIDEYGADALRFTNAAMASLGGVLKLDMQRIA 656

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                +    + N    +        DG IPTP A    +  I+   ++V Q + E ++ 
Sbjct: 657 G--YRNFGTKLWNAARFAEMNGATGSDGQIPTPEAT--VNRWIIGETAKVRQVVDEALET 712

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   +   V     D Y +  KP  L   +  +A T       VI Q  ILL   
Sbjct: 713 FRFNDAAQALYGFVWGKVCDWYVEFSKPLLLDGDDATKAET-QATMAWVIDQCLILLHPI 771

Query: 466 VPKLANKIFDILFVAD 481
           +P +  +++  L   D
Sbjct: 772 MPFITEELWGTLGRRD 787



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 59/187 (31%), Gaps = 33/187 (17%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GHA+   + D+L R+ R+ G D L+  GTD  G       
Sbjct: 35  GRDSYSIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTT-------- 98
           +                        + +Q+     +    L  S D F RT         
Sbjct: 95  ERELAKEGKKRTDFSRDEFLSRIWAWKEQSGGTIINQLKRLGASCD-FDRTAFTMAGAAG 153

Query: 99  --------EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
                       HD    ++ ++ +KG IY+G     +    E   +D EV       + 
Sbjct: 154 DTSTGHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENVEVAGHM 213

Query: 151 NAQHNPV 157
                P+
Sbjct: 214 WHFKYPL 220


>gi|114570478|ref|YP_757158.1| valyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114340940|gb|ABI66220.1| valyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 893

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 133/364 (36%), Gaps = 9/364 (2%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y N  E+ K A     + +        E+ YF  +   Q   +S        +    
Sbjct: 370 DQWYVNAGELAKDAIAAVEDGRTTFHPKTWEKTYFEWMRNIQPWCISRQLWWGHRVPAWY 429

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
             +  +   +S       +R      + +  D   ++  W  +     +T G+ D+    
Sbjct: 430 DEDGNVFVAESEEAAAEQARAKLGKDVALTQDED-VLDTWFSSALWPFSTLGWPDDTPEM 488

Query: 252 KAKFWPADLHVIGKDILRFH-AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
             +++P  + +   DI+ F  A      L    +   K V+ H  +  + G+K+SKS GN
Sbjct: 489 VERYYPTSVLITAFDIIFFWVARMMMQGLHFMKVAPFKDVYIHALVRDENGQKMSKSKGN 548

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VIDP+E+I+E G DA+R+ L  +   G+D    K+ ++     +    + N  +R   M 
Sbjct: 549 VIDPLELIDEYGADAVRFTLAAQAGQGRDIRMSKERVEG--YRNFGTKLWN-AARFAEMN 605

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                            ++ I+S  ++ ++ I   +     + A A     V     D +
Sbjct: 606 ECVVPDGYDPKSVTQTVNKWIISEAAQAVEAINAGLDGYRFNDAAAAAYRFVWNVFCDWH 665

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +  KP      +    +     T  V+ Q   +L  F+P +   ++      D      
Sbjct: 666 LEFAKP-LFNGEDEAAKAETRATTAYVLDQALKMLHPFMPFVTEALWAETGTRDTQLIVA 724

Query: 488 SLDQ 491
              Q
Sbjct: 725 EWPQ 728



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I         + HIGHA    + DVL R+ R+ G  VL+  GTD  G       + 
Sbjct: 37  EAFSIVIPPPNVTGRLHIGHALNNTLQDVLVRYKRMLGCSVLWQPGTDHAGIATQMVVER 96

Query: 65  AGVTT-----------------KVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   + ++      +  R +    D S + F  T ++   
Sbjct: 97  QLAQEGNISRADMGREAFIKRVWEWKEESGGAIMQQLRRLGATCDWSRERF--TLDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                ++ ++  +G IY+      +    +   +D EV       ++     P+
Sbjct: 155 KAVLKVFVELHQQGLIYRDKRLVNWDPHFQTAISDLEVENRETQGHFWHFAYPL 208


>gi|294812614|ref|ZP_06771257.1| Valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294325213|gb|EFG06856.1| Valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 875

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 126/369 (34%), Gaps = 37/369 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E  ++        + D  
Sbjct: 355 HCSRCFTTIEPRLSLQWWVKVGPLARAAGDAVRDGKVAIHPAE-LSKRYFDWVDNMHDWC 413

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 414 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEQPPTGEGWTQDEDVLDTWFSSGLWPFSTLGW 472

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +       KF+  D+ + G DI+ F     + +  + +    P      +       G+
Sbjct: 473 PEQTP-DLEKFYATDVLLTGHDIIFFWVARMMMFGLYAMDGEPPFHTIALTGLVRDEHGK 531

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N +DP++ ++  G DA+R+ L R    G D    +D ++   N   AN I N 
Sbjct: 532 KMSKSNPNSVDPLDWMDAYGSDAVRFTLARGANPGADVPIGEDWVQASRN--FANKIWN- 588

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  +R + E      +    +    +    
Sbjct: 589 ATRFALMNGATVEGELPPAEKMSAADRWILSRLNRTVAEADAFYDDYQFAKVSDSLYHFA 648

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K         ++A     V  EV+     LL   VP +   ++  L  
Sbjct: 649 WDEVFDWYVELSK--TTYFEGGEQAQVSARVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 706

Query: 480 ADENRCFQS 488
            +     + 
Sbjct: 707 KETLVTAEW 715



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+++ + D L R  R+ G + L+  G D  G      
Sbjct: 46  SEKPPYTIVIPPPNVTGALHLGHAFQVTLMDALTRRKRMQGFETLWLPGMDHAGIATQNK 105

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +  +     R +   LD S + F  T ++ 
Sbjct: 106 VEQQLAEEGKSRHDLGRDAFTERVWQWKDEYGGRILGQLRRLGAGLDWSRERF--TMDEG 163

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K + D   IY+      +  R     +D EV    D
Sbjct: 164 LSRAVQTIFKNLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 208


>gi|241762486|ref|ZP_04760563.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241372988|gb|EER62655.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 884

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 134/368 (36%), Gaps = 40/368 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++          L    S    I+P        ++++  ++   +SR+   
Sbjct: 357 PIEPWLTDQWYVDAEKLAQPALEAVRSGKIKIIPESWTKTYYNWLE-NIQPWCISRQ-LW 414

Query: 216 WG--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLDN 247
           WG  I +                                ++  W  +      T G+ D 
Sbjct: 415 WGHQIPVWYTDDGQAIVAENEESAQEKAGQGVNLRRDPDVLDTWFSSALWPFATLGWPDT 474

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              S  + +P D+ + G DIL F    +         ++P PK           G K+SK
Sbjct: 475 DPKSLGR-YPNDVLISGFDILFFWDARMIMQGLHFMKDVPFPKLYLHGLVRAADGSKMSK 533

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN +DP+ +I++ G DALR+ L    + G+D   D+  ++     + A  + N V  +
Sbjct: 534 SKGNTVDPLGLIDKYGADALRFTLCAMESQGRDIKLDEKRVEG--YRNFATKLWNAVRFA 591

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
            +          P     T ++  I++  ++V + + +++++         +   V    
Sbjct: 592 QNNNCAVNTSKQPPEATLT-TNRWIIAETAKVARALDQHIEDMRYDELANSLYHFVWNDF 650

Query: 424 VDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            D Y +  KP     +  N       L V   VI Q+ I+L   +P +  +++  L   D
Sbjct: 651 CDWYLELIKPILTSTEDQNQGELQETLAVLGWVIDQILIMLHPIMPFITEELWHALGDRD 710

Query: 482 ENRCFQSL 489
            +    + 
Sbjct: 711 HDLIVAAW 718



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 22/174 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           HIGHA +  + D+L R  RL G D L+  GTD  G       + 
Sbjct: 34  DPFTLVIPPPNVTGSLHIGHALDDTLQDILVRHARLKGKDALWVVGTDHAGIATQMVVER 93

Query: 65  A---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                      +  + FV++                R +    D +++ F  T ++    
Sbjct: 94  NLAKIGQKRTDMDRETFVNKVWEWKAESGGTITRQLRRLGASCDWAHERF--TMDEGFSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++  + ++G IY+      +        +D EV       ++     P++
Sbjct: 152 AVIKVFVSLYNEGLIYRDKRLVNWDPHLGTAISDLEVENREVQGHFWHFRYPLE 205


>gi|294499492|ref|YP_003563192.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294349429|gb|ADE69758.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 1031

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 137/390 (35%), Gaps = 12/390 (3%)

Query: 100 KRHHDTCRILWKKISD--KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           K  H+       +          +  +    +L+++   N++ V    D   +    N +
Sbjct: 377 KEKHEHSYPFCWRCDSPLLYYANESWFIQTTALKEQFLKNNESVTWYPDHIKHGRFGNFL 436

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK---TF 214
           + M +     +        +         + P   +        S    + L +      
Sbjct: 437 ENMVDWNISRKRYWGTPLNVWECGECQHQVAPKSIKELQKHASHSVDDSIELHKPYVDDV 496

Query: 215 DWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                           ++ VW D+ +       Y    +    K +PAD+   G D    
Sbjct: 497 QLTCPACSGEMKRTPEVIDVWFDSGSMPFAQYHYPFENNELFQKQFPADVIAEGIDQTRG 556

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L +   P  + +     +   G+K+SKS GN +DP+++I   G DALR+ 
Sbjct: 557 WFYSLMAVSTLFTGKAPYKRVLSLGHVLDENGQKMSKSKGNALDPVDLIHTFGADALRWA 616

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+ + A      + +  +++  +  +   +       +   L  YD         T+ DE
Sbjct: 617 LLADSAPWNPKKFSERVVQEAKSKVIDTLVNVYGFYVLYAKLDGYDPEQTYELKKTKLDE 676

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
            ILS     ++ +  ++++     A  ++   + E+ + Y    +     +      +  
Sbjct: 677 WILSRLHSTVKRVTAHLEDYGFTSAAREIAVFIEELSNWYVRRSRDRFWSEGMDGEKAAA 736

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                EV+  L+ LL  F P +A+ I + L
Sbjct: 737 YDTLHEVLVTLSQLLAPFTPFVADDIHENL 766



 Score = 63.6 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  PH+GHA    I DV+AR+  + G  V+   G D HG  +   
Sbjct: 35  EGHPSFVFYEGPPTANGLPHVGHALGRTIKDVVARYKTMTGHQVIRKAGWDTHGLPVELG 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +R   + L   +  +D   T E  +
Sbjct: 95  VEKQLGISGKHDIEKYGVEAFINKCKESVFVYEKQWRTFTEQLGYWVGMEDPYITLENSY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   I DKG +YKG     Y    +   +  EV +G  
Sbjct: 155 IESVWNVLGTIHDKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|239941124|ref|ZP_04693061.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239987602|ref|ZP_04708266.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291444565|ref|ZP_06583955.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291347512|gb|EFE74416.1| valyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 873

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ +++   +            I P E   +        L D  
Sbjct: 353 HCSRCKTTIEPRLSLQWWVKVAPLAEAAGDAVRDGKVKIHPQE-MEKRYFDWVDNLHDWC 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDDEAPTGEGWTQDNDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN---LPLPKKVFSHGFILHKGE 301
            +  D S AKF+P  + V G DIL F       F L  N    P    V         G+
Sbjct: 471 PERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGVPPFGTIVLHGMVRDEHGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +++ G DALR+ L R    G D    +D ++    A  +N I N 
Sbjct: 530 KMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGEDWVQGS--AKFSNKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P+    + +D  ILS  ++ + ++     +    +    +    
Sbjct: 587 ATRFALMNGATIEGELPSAEEMSVTDRWILSRLNKTVADVDAFYDDFQFAKISEALRHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K        P   S    V  EV+  +  LL   VP +   ++  L
Sbjct: 647 WDEVFDWYVELSKTTFFAGGRPAEVS--GRVLGEVLDVMLRLLHPIVPFVTEALWTAL 702



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPYSIVIPPPNVTGSLHLGHAFEHTLIDALVRRKRMQGFEALYQPGMDHAGIATQNV 103

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + + +  S + F  T ++ 
Sbjct: 104 VERELGKEGKSRHDLGREAFVERVWQWKNESGGQISGQMRRLGEGVAWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D G IY+      +  R     +D EV    D
Sbjct: 162 LSKAVQTVFKQMYDDGLIYRAERIINWCPRCLTAISDIEVEYQED 206


>gi|254392444|ref|ZP_05007625.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440938|ref|ZP_08215672.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197706112|gb|EDY51924.1| valyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 873

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 126/369 (34%), Gaps = 37/369 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ ++                 I P E  ++        + D  
Sbjct: 353 HCSRCFTTIEPRLSLQWWVKVGPLARAAGDAVRDGKVAIHPAE-LSKRYFDWVDNMHDWC 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEQPPTGEGWTQDEDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +       KF+  D+ + G DI+ F     + +  + +    P      +       G+
Sbjct: 471 PEQTP-DLEKFYATDVLLTGHDIIFFWVARMMMFGLYAMDGEPPFHTIALTGLVRDEHGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N +DP++ ++  G DA+R+ L R    G D    +D ++   N   AN I N 
Sbjct: 530 KMSKSNPNSVDPLDWMDAYGSDAVRFTLARGANPGADVPIGEDWVQASRN--FANKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  +R + E      +    +    +    
Sbjct: 587 ATRFALMNGATVEGELPPAEKMSAADRWILSRLNRTVAEADAFYDDYQFAKVSDSLYHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D Y +  K         ++A     V  EV+     LL   VP +   ++  L  
Sbjct: 647 WDEVFDWYVELSK--TTYFEGGEQAQVSARVLGEVLDVTLRLLHPVVPFVTETLWTTLTG 704

Query: 480 ADENRCFQS 488
            +     + 
Sbjct: 705 KETLVTAEW 713



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+++ + D L R  R+ G + L+  G D  G      
Sbjct: 44  SEKPPYTIVIPPPNVTGALHLGHAFQVTLMDALTRRKRMQGFETLWLPGMDHAGIATQNK 103

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +  +     R +   LD S + F  T ++ 
Sbjct: 104 VEQQLAEEGKSRHDLGRDAFTERVWQWKDEYGGRILGQLRRLGAGLDWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K + D   IY+      +  R     +D EV    D
Sbjct: 162 LSRAVQTIFKNLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 206


>gi|225619103|ref|YP_002720329.1| valyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225213922|gb|ACN82656.1| valyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 884

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 135/362 (37%), Gaps = 41/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    HN V+    + +F ++    +K           I P    N   +   + ++D  
Sbjct: 347 HCYRCHNVVEPYYSDQWFVKMKPLAEKAYKAVNDGNTKIYPERWINT-YNHWMTDIRDWC 405

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +     +
Sbjct: 406 ISRQ-LWWGHRIPVWYCDDCGEMMVSKTDITECTKCKSKNIHQDEDVLDTWFSSWLWPFS 464

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +  +  K  F+P    V G DIL F    +         ++P      +      
Sbjct: 465 TFGWPEVNEELK-YFYPTTALVTGYDILFFWVARMIMAGTHFMNDVPFKDVYLNGLIRDK 523

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANG 357
            G K+SKSLGN IDPIE+I+E G DA R+ L    + G +D + D++  K  +    AN 
Sbjct: 524 IGRKMSKSLGNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFK--MGGKFANK 581

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N        I  + +            D+ ILS   + ++   + ++      A   +
Sbjct: 582 IYNSAKYIFGNIDDNANIKDLDSYTLENKDKWILSRLQKAIESTTQKLKEYRFDEASQTI 641

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +  K ++LK  +  +    + V + V+ +   ++  F+P +  +I+ 
Sbjct: 642 YKFYWNEFCDWYIEISK-FDLK--DESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYS 698

Query: 476 IL 477
            L
Sbjct: 699 NL 700



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I           H+GH     + D+L RFHR+ G   L+  GTD  G      
Sbjct: 34  KNKEPYSIVIPPPNVTGVLHMGHGLNNTLQDILIRFHRMLGKCTLWMPGTDHAGIATQNV 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                     T    +++        + +  S  +D    T ++   
Sbjct: 94  VERRLKAEGKNKHDLGREAFVKKTWEVANEHHSIIVKQLEKIGCSCDWDRERFTLDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++ ++ ++G IY+G Y   Y         +DEV  
Sbjct: 154 NAVREVFVELYNQGLIYRGKYLINYCPSCGTALANDEVEH 193


>gi|78357880|ref|YP_389329.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220285|gb|ABB39634.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 883

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 129/372 (34%), Gaps = 24/372 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G  Y+        +  + +    ++   A            +  E+       + Y 
Sbjct: 343 HNVGHCYRCKTVVEPYVSTQWFVAMTKLAPRARAAVPAQTQIYPENWEK-------TYYN 395

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                        I    R           L     + +    G       + ++  W  
Sbjct: 396 WLDNIRDWCISRQIWWGHRIPAWTCEDCGELIVAMDAPQACKCGSTRLTQDEDVLDTWFS 455

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +     +T G+ D+ +  K +F+P  + V G DIL F    W A ++   L    ++  H
Sbjct: 456 SALWPFSTLGWPDSTEELK-QFYPTSVLVTGFDILFF----WVARMMMMGLQFMDEIPFH 510

Query: 294 GFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +        G+K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D    +  ++
Sbjct: 511 HVYIHALVRDEHGKKMSKSTGNVIDPVEMIDKYGTDSLRFTLTAFAAMGRDIKLSEARIE 570

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                   N I N    ++  + ++                 IL     V   +      
Sbjct: 571 G--YRHFINKIWNAARFALMNLPEEQPAPCDLAAVQELHHRWILHRLEEVKSSVDSAFTG 628

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   +         D Y +  KP        +R +   +V   V++++ +L+   
Sbjct: 629 YRFNEAAQTLYKFFWNELCDWYLELSKPDMQAGG--ERRARAQFVLWTVLKEVLVLMHPV 686

Query: 466 VPKLANKIFDIL 477
           +P +  +I+++L
Sbjct: 687 MPFVTAEIWNVL 698



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 22/174 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA  + + D+L RFHR  G  VL+  GTD  G       + 
Sbjct: 38  EPYSIVIPPPNVTGALHMGHALNLTLQDILCRFHRQKGRKVLWVPGTDHAGIATQNVVER 97

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                                    + + ++     R M   +D + + F  T ++    
Sbjct: 98  QLAREGKGRHDLGREKFIERVWQWREEYGNRILSQIRKMGASVDWTRERF--TMDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             R ++ K+ + G IYKG Y   +  R      DDEV   A+    +    P++
Sbjct: 156 AVRQVFVKLYEDGLIYKGNYIINWCPRCHTALADDEVDHSAEKGALHYVRYPLE 209


>gi|300871449|ref|YP_003786322.1| valyl tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689150|gb|ADK31821.1| valyl tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 892

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 135/362 (37%), Gaps = 41/362 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +    HN V+    + +F ++    +K           I P    N   +   + ++D  
Sbjct: 355 HCYRCHNVVEPYYSDQWFVKMKPLAEKAYKAVNDGNTKIYPERWINT-YNHWMTDIRDWC 413

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +     +
Sbjct: 414 ISRQ-LWWGHRIPVWYCDDCGEMMVSKTDVTECSKCKSKNIHQDEDVLDTWFSSWLWPFS 472

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ +  +  K  F+P    V G DIL F    +         ++P      +      
Sbjct: 473 TFGWPEVNEELK-YFYPTTALVTGYDILFFWVARMIMAGTHFMNDVPFKDVYLNGLIRDK 531

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANG 357
            G K+SKSLGN IDPIE+I+E G DA R+ L    + G +D + D++  K  +    AN 
Sbjct: 532 IGRKMSKSLGNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFK--MGGKFANK 589

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N        I  + +            D+ ILS   + ++   + ++      A   +
Sbjct: 590 IYNSAKYIFGNIEDNANIKDLDTYTLENKDKWILSRLQKAIESTTQKLKEYRFDEASQTI 649

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +  K ++LK  +  +    + V + V+ +   ++  F+P +  +I+ 
Sbjct: 650 YKFYWNEFCDWYIEISK-FDLK--DESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYS 706

Query: 476 IL 477
            L
Sbjct: 707 NL 708



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I           H+GH     + D+L RFHR+ G   L+  GTD  G      
Sbjct: 42  KNKEPYSIVIPPPNVTGVLHMGHGLNNTLQDILIRFHRMLGKCTLWMPGTDHAGIATQNV 101

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                     T    +++        + +  S D      T ++   
Sbjct: 102 VERRLKAEGKNKHDLGREAFVKKTWEVANEHHSIIVKQLEKIGCSCDWERERFTLDEGLS 161

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  R ++ ++ ++G IY+G Y   Y         +DEV  
Sbjct: 162 NAVREVFVELYNQGLIYRGKYLINYCPSCGTALANDEVEH 201


>gi|242043012|ref|XP_002459377.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
 gi|241922754|gb|EER95898.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
          Length = 977

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 129/358 (36%), Gaps = 22/358 (6%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  ++  E     ++  + L+ +++ 
Sbjct: 455 PERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARTEEEALAKAQEK 514

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
           +   ++I  DP  ++  W  +     +T G+ D        F+P+ +   G DIL F   
Sbjct: 515 YGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSKEDYKHFYPSTVLETGHDILFFWVA 573

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +       + ++P             +G K+SK+LGNVIDP++ I++ G DALR+ L  
Sbjct: 574 RMVMMGIEFTGSVPFSYVYLHGLIRDAEGRKMSKTLGNVIDPLDTIKDYGTDALRFTLSL 633

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE--- 388
             A G+D     + L    N    N + N     +  +    D          + D    
Sbjct: 634 GTA-GQDLNLSIERLTS--NKAFTNKLWNAGKFLLQNLPDKSDVSAWDVLLANKFDSEAS 690

Query: 389 ---------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                     +++    ++ ++  +        A  ++         D Y +A K     
Sbjct: 691 LQKLPLPECWVVTGLHELIDKVSRSYDKFFFGDAAREIYDFFWGDFADWYIEASKTRLYH 750

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            ++   A+T   V V V   +  LL  F+P +  +++       +            P
Sbjct: 751 SSDKFAAATAQSVLVYVFENILKLLHPFMPFVTEELWQAFPYRKQALMVTPWPTTGLP 808



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D++ R+ R+ G   L+  GTD  G       + 
Sbjct: 91  DPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYFRMKGRPALWIPGTDHAGIATQLVVEK 150

Query: 65  ---------AGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                      +T + F  +                R +    D S + F  T +++   
Sbjct: 151 MLAAEGVKRTDMTREEFTKKVWEWKEKYGGTITNQIRRLGASCDWSRERF--TLDEQLSR 208

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ DKG IY+G Y   +S   +   +D EV  
Sbjct: 209 AVVEAFVRLHDKGLIYQGSYLVNWSPNLQTAVSDLEVEY 247


>gi|283856570|ref|YP_163613.2| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|292495062|sp|Q5NLA8|SYV_ZYMMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|283775579|gb|AAV90502.2| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 884

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 134/368 (36%), Gaps = 40/368 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++          L    S    I+P        ++++  ++   +SR+   
Sbjct: 357 PIEPWLTDQWYVDAEKLAQPALEAVRSGKIKIIPESWTKTYYNWLE-NIQPWCISRQ-LW 414

Query: 216 WG--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLDN 247
           WG  I +                                ++  W  +      T G+ D 
Sbjct: 415 WGHQIPVWYTDDGQAIVAENEESAQEKAGQGVNLRRDPDVLDTWFSSALWPFATLGWPDT 474

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              +  + +P D+ + G DIL F    +         ++P PK           G K+SK
Sbjct: 475 DPKALGR-YPNDVLISGFDILFFWDARMIMQGLHFMKDVPFPKLYLHGLVRAADGSKMSK 533

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN +DP+ +I++ G DALR+ L    + G+D   D+  ++     + A  + N V  +
Sbjct: 534 SKGNTVDPLGLIDKYGADALRFTLCAMESQGRDIKLDEKRVEG--YRNFATKLWNAVRFA 591

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
            +          P     T ++  I++  ++V + + +++++         +   V    
Sbjct: 592 QNNNCAVNTSKQPPEATLT-TNRWIIAETAKVARALDQHIEDMRYDELANSLYHFVWNDF 650

Query: 424 VDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            D Y +  KP     +  N       L V   VI Q+ I+L   +P +  +++  L   D
Sbjct: 651 CDWYLELIKPILTSTEDQNQGELQETLAVLGWVIDQILIMLHPIMPFITEELWHALGDRD 710

Query: 482 ENRCFQSL 489
            +    + 
Sbjct: 711 HDLIVAAW 718



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 22/174 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           HIGHA +  + D+L R  RL G D L+  GTD  G       + 
Sbjct: 34  DPFTLVIPPPNVTGSLHIGHALDDTLQDILVRHARLKGKDALWVVGTDHAGIATQMVVER 93

Query: 65  A---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                      +  + FV++                R +    D +++ F  T ++    
Sbjct: 94  NLAKIGQKRTDMDRETFVNKVWEWKAESGGTITRQLRRLGASCDWAHERF--TMDEGFSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++  + ++G IY+      +        +D EV       ++     P++
Sbjct: 152 AVIKVFVSLYNEGLIYRDKRLVNWDPHLGTAISDLEVENREVQGHFWHFRYPLE 205


>gi|24372757|ref|NP_716799.1| leucyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|32171553|sp|Q8EHP4|SYL_SHEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24346832|gb|AAN54244.1|AE015561_4 leucyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 859

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     A
Sbjct: 30  QNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AINNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+ 
Sbjct: 150 YKKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G      ++ S K+FD     PD    + YV I A 
Sbjct: 206 IDTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 109/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y               +KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQAEQMLDPTKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
                  K++ + G +L                            KG             
Sbjct: 552 VNTNEPAKQLLTQGMVLADAFYYTNDKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASEYVAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALSAVVRLLYPIIPHVSFTLW 772

Query: 475 DILFVAD--ENRCFQSLDQ 491
           + L   +  E+  +  +D+
Sbjct: 773 NELGNTNSIEDSQWPVVDE 791


>gi|260753496|ref|YP_003226389.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552859|gb|ACV75805.1| valyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 884

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 134/368 (36%), Gaps = 40/368 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++          L    S    I+P        ++++  ++   +SR+   
Sbjct: 357 PIEPWLTDQWYVDAEKLAQPALEAVRSGKIKIIPESWTKTYYNWLE-NIQPWCISRQ-LW 414

Query: 216 WG--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLDN 247
           WG  I +                                ++  W  +      T G+ D 
Sbjct: 415 WGHQIPVWYTDDGQAIVAENEESAQEKAGQGVNLRRDPDVLDTWFSSALWPFATLGWPDT 474

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
              +  + +P D+ + G DIL F    +         ++P PK           G K+SK
Sbjct: 475 DPKALGR-YPNDVLISGFDILFFWDARMIMQGLHFMKDVPFPKLYLHGLVRAADGSKMSK 533

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN +DP+ +I++ G DALR+ L    + G+D   D+  ++     + A  + N V  +
Sbjct: 534 SKGNTVDPLGLIDKYGADALRFTLCAMESQGRDIKLDEKRVEG--YRNFATKLWNAVRFA 591

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
            +          P     T ++  I++  ++V + + +++++         +   V    
Sbjct: 592 QNNNCAVNTSKQPPEATLT-TNRWIIAETAKVARALDQHIEDMRYDELANSLYHFVWNDF 650

Query: 424 VDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            D Y +  KP     +  N       L V   VI Q+ I+L   +P +  +++  L   D
Sbjct: 651 CDWYLELIKPILTSTEDQNQGELQETLAVLGWVIDQILIMLHPIMPFITEELWHALGDRD 710

Query: 482 ENRCFQSL 489
            +    + 
Sbjct: 711 HDLIVAAW 718



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 22/174 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           HIGHA +  + D+L R  RL G D L+  GTD  G       + 
Sbjct: 34  DPFTLVIPPPNVTGSLHIGHALDDTLQDILVRHARLKGKDALWVVGTDHAGIATQMVVER 93

Query: 65  A---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                      +  + FV++                R +    D +++ F  T ++    
Sbjct: 94  NLAKIGQKRTDMDRETFVNKVWEWKAESGGTITRQLRRLGASCDWAHERF--TMDEGFSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++  + ++G IY+      +        +D EV       ++     P++
Sbjct: 152 AVIKVFVSLYNEGLIYRDKRLVNWDPHLGTAISDLEVENREVQGHFWHFRYPLE 205


>gi|331695815|ref|YP_004332054.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950504|gb|AEA24201.1| Valyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 874

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 35/353 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+ A          +    I P +       +V   + D  +SR+   W
Sbjct: 360 IEPRLSLQWFVRVEALAKAAGDAVRNGDTTIHPADMSARFFDWVD-NMHDWCISRQ-LWW 417

Query: 217 G--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           G  I +   P                        ++  W  +     +T G+ D  +   
Sbjct: 418 GHRIPVWYGPDGETVCVGPDEEPPTGEGWARDEDVLDTWFSSGLWPFSTLGWPDKTE-DL 476

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSA-NLPLPKKVFSHGFILHK-GEKISKSLGNV 310
            +++P    V G DIL F  +    F   A      + V+ HG I  + G K+SKS GNV
Sbjct: 477 ERYYPTSALVTGYDILFFWVVRMMMFGTYAMGATPFRHVYLHGLIRDEHGRKMSKSKGNV 536

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+E+I+  G DALR+ + R    G D     + +    N      + N  +R      
Sbjct: 537 IDPLELIDAYGADALRFTIARGSNPGTDMSLSDEWVAASRN--FTTKLWN-ATRFAIANG 593

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
            D    +P   + T++D  IL    +V Q+    +++    +A   +     +   D Y 
Sbjct: 594 ADAAAGLPATESLTDADRWILGRLHQVRQQTDALLEDFQFAKATEGLFHFTWDELCDWYI 653

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  KP +L       A+    V   V+  L  LL   VP +   ++  L   +
Sbjct: 654 ELAKP-QLADPASTTAANTRAVLGHVLDALLRLLHPIVPFVTEALWTGLTGGE 705



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R    I+          H+GHA +  + D+L R  R+ G D L+  G D  G      
Sbjct: 41  SDRPPYCIAIPPPNVTGSLHLGHAMDHTLIDILTRRRRMQGYDTLWLPGMDHAGIATQSV 100

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + FV +                + + D +D S + F  T ++
Sbjct: 101 VERRLADAGEPTRRELGREEFVRRVWEWKAESGGAILGQMKRLGDGVDWSRERF--TLDE 158

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D G IY+      +S   ++  +D EV  
Sbjct: 159 GLSRAVQTVFKRMFDDGLIYRAERLVNWSPALQSAISDIEVDH 201


>gi|114046568|ref|YP_737118.1| leucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123131668|sp|Q0HXU4|SYL_SHESR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113888010|gb|ABI42061.1| leucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 859

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++ S K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 110/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y               +KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQADQMLDPTKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYTNDKGARVWVSPLDVVTTEKDDKGRVTKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASDYVAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALTAVVRLLYPIIPHVSFTLW 772

Query: 475 DILFVAD--ENRCFQSLDQ 491
           + L   +  E+  +  +D+
Sbjct: 773 NELGNTNSIEDSQWPVVDE 791


>gi|104780203|ref|YP_606701.1| methionine--tRNA ligase [Pseudomonas entomophila L48]
 gi|95109190|emb|CAK13887.1| putative Methionine--tRNA ligase [Pseudomonas entomophila L48]
          Length = 662

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 107/539 (19%), Positives = 192/539 (35%), Gaps = 40/539 (7%)

Query: 8   YISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            I      PN   H+GH     I  DVL R     G  V + +G D++   +   A   G
Sbjct: 114 LIFATPPTPNGDLHLGHLSGPYIAGDVLKRVLAGAGAQVFYGSGRDDNQTYVVTCAAREG 173

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK-RHHDTCRILWKKISDKGDIYKGCYS 125
            +     D  +   R+      I  D FI    +  + D      +++ D+G IY     
Sbjct: 174 FSPSECADHYAEAIRETWQGYGIDMDFFITPDNQGEYADFVHHYLQRLYDQGLIYAKDTP 233

Query: 126 GWYSLR----DEAYYNDDEVYKGA--DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +   +     EA+ +    + G   DG    A   P Q ++      +    Q +L   
Sbjct: 234 VFVDNQGNALHEAFIHGGCPHCGESSDGNACEACGQPNQCVDLTQPRVKQDGRQPQLKIE 293

Query: 180 YESHPEF--------------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDD 223
                                 +P        + +  GL D+ +S ++ DWGI+  +P  
Sbjct: 294 TRLFFRLSALADELASYVQTANMPAHVYQLCHTMLSQGLPDICISHRS-DWGIRHRLPGM 352

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPAD---LHVIGKDILRFHAIYWP 276
              ++YVW +    YL     L   +G +    A+ +      +H  G D   +H + +P
Sbjct: 353 QDQVVYVWFEMAFGYLWAASELPGAEGDRVARAAQRYAGAMDIVHCYGFDNAYYHTLLFP 412

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A  L+  L  P+    +  +   G K S S  ++I   + + E G D  R  L+     G
Sbjct: 413 AVYLALGLTPPRHHVVNELLDLNGSKFSTSRRHLIWGKDFLTEAGADYARMALMLTRPEG 472

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCS 395
               +  D + +R+N   A+ + + V R +   +    G +P  GA+  SD+ I      
Sbjct: 473 VRTNFTVDQVCERINDLFADKLTHWVQR-LQQHVARQGGQVPESGAW-LSDQKIYHGELM 530

Query: 396 RVLQEIRENMQNQLI--HRALAQVISLVSEVDRYFDAQKPWELKKTNP--DRASTVLYVT 451
           + +   R+    Q     R   QV  ++      F   +   L    P  + A T + + 
Sbjct: 531 QWMAGYRQAAATQTFSPRRMAEQVAQVIDRA-WRFGLAQEHLLAPGQPLSNHARTAVALL 589

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
               R LA      +P L+ ++ ++L +  +               +L +      P+ 
Sbjct: 590 ALTARWLAHATTPLMPGLSRQLNEVLNIEAQANDAAQACTFFAGNHVLAQGATLALPKL 648


>gi|113969341|ref|YP_733134.1| leucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123029885|sp|Q0HLJ0|SYL_SHESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113884025|gb|ABI38077.1| leucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 859

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++ S K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 110/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y               +KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQADQMLDPTKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYNNDKGARVWVSPLDVVTTEKDDKGRVTKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASDYVAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALTAVVRLLYPIIPHVSFTLW 772

Query: 475 DILFVAD--ENRCFQSLDQ 491
           + L   +  E+  +  +D+
Sbjct: 773 NELGNTNSIEDSQWPVVDE 791


>gi|309776468|ref|ZP_07671454.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915859|gb|EFP61613.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 875

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/366 (19%), Positives = 142/366 (38%), Gaps = 33/366 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+    + +F ++    +++L   E+  +      +R  +        ++D  +SR+   
Sbjct: 352 VEPYLSKQWFVKMEPLAEEVLKNQETEDQKIHFYPQRFEKTFHQWLENIEDWCISRQ-LW 410

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +     +T G+       K
Sbjct: 411 WGHRIPAWYHKETGEIYVGMQAPADIDNWVQDEDVLDTWFSSALWPFSTLGWPQETADLK 470

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P D+ V G DI+ F    + +       + P    +        +G K+SKSLGN 
Sbjct: 471 -RYFPNDVLVTGYDIIFFWVARMAFQTRYCMNSRPFKDVLIHGLVRDAQGRKMSKSLGNG 529

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI E GVDALR+FL      G+D  Y  + +    N    N I N     +  I 
Sbjct: 530 IDPMDVIAEHGVDALRFFLTTNSTPGQDLRYIDEKVAASAN--FINKIWNASRFVLMQIP 587

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +D +         +  D+ IL   + VL+ +  NM+         ++ S + +     Y 
Sbjct: 588 EDMEVPDIDLSNASMIDKWILKRFNEVLESVTANMEKYEYALVGNELYSFIWDDFCSWYI 647

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   L   +           V V+  +  +LQ F+P +  +I+  +   +E+   + 
Sbjct: 648 ELSKA-GLSSDDDMVRKAAQSTLVTVLSGIVRMLQPFMPFVTEEIYLSIPHTEESINLEV 706

Query: 489 LDQRLK 494
             + ++
Sbjct: 707 WPRAVE 712



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 19/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   I         + H+GHA++  + D+++R+ R+ G D+L+  G D  G      
Sbjct: 33  KSKDPFCIVIPPPNVTGKLHLGHAWDTTLQDIVSRYKRMQGYDMLWLPGMDHAGIATQAK 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                                     + ++ +   R     + +S D      T ++   
Sbjct: 93  VDERLKNEGISRYDIGREKFLDRAWEWKEEYAATIRKQWAKMGLSLDYTRERFTLDEGLS 152

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +  R ++  +   G IY+G     W      A  N + ++K  +G  Y  ++  V+  +E
Sbjct: 153 EAVRKVFVDLYHDGLIYQGERIINWDPQAKTALSNIEVIHKEIEGAMYYFKYKVVETGKE 212


>gi|163784806|ref|ZP_02179595.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879925|gb|EDP73640.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 629

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 112/276 (40%), Gaps = 12/276 (4%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
             G ++    + ++  W  +      T G+ +       K++P  L V G DI+ F    
Sbjct: 217 KCGSRVLAQEEDVLDTWFSSALWPFGTLGWPEKTP-ELQKYYPTSLLVTGFDIIFFWVAR 275

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +       +   P             KGEK+SK+ GNVIDP+++ E+ G D+LR+ L   
Sbjct: 276 MIMMGLYFTKEKPFSDVYIHALVRDEKGEKMSKTKGNVIDPLDMAEKYGADSLRFTLAAL 335

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDES 389
            A G+D    +  ++     + AN I N  S+ V   +K+++       T    +  D+ 
Sbjct: 336 AAQGRDIRLSEKRIEG--YRNFANKIWN-ASKYVLQNVKNFNGNIIQDITSLELSAEDKW 392

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           I+S   +++  +   + +   +               D Y +  K    K ++ D+    
Sbjct: 393 IVSKLQKIISNLENAINSYRYNDYANGAYDFFWHEYCDWYLEFTKERVYKGSDKDK-QVA 451

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           L   + V+ +   +L   +P +  +I+  L   D++
Sbjct: 452 LSTLIYVLDKSLRILHPVMPFITEEIWQQLPTKDKD 487


>gi|222873365|gb|EEF10496.1| predicted protein [Populus trichocarpa]
          Length = 371

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 158/374 (42%), Gaps = 36/374 (9%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           D HG  I   A   GV  +  +    +         +IS+D++  T    + +    ++ 
Sbjct: 1   DAHGTPIMLKADQMGVKPEQLIADVQQKHMADFSGFNISFDNYHSTHSDENRELVEAIYH 60

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWM 160
           K+   G I     S  +      +  D            E   G + +  +A ++P++ +
Sbjct: 61  KLKQNGFIKTRIISQLFDPEKAMFLPDRFVKGTCPKCKAEDQYGDNCEVCSATYSPIELI 120

Query: 161 --------------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                         E E +FF L A++  L  +  S     L  E  N++  + ++GL+ 
Sbjct: 121 SPRSTVSGATPVLKESEHFFFDLPAFESMLTEWIRSGS---LQQEVANKMQEWFEAGLQQ 177

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD----- 259
             +SR    +G KIP+      YVW+DA   Y+ +   L           FW  +     
Sbjct: 178 WDISRDAPYFGFKIPNTDNKYFYVWLDAPIGYMASFKNLCGKKSGIDFDSFWSKESHAEL 237

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
            H IGKDI+ FH+++WPA L  A+L  P  +F HG++   GEK+SKS G  I     ++ 
Sbjct: 238 YHFIGKDIMYFHSLFWPAMLDGASLRKPNNIFVHGYVTVNGEKMSKSRGTFIQAATYLKY 297

Query: 320 VGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           +  + LRY+   ++     D   + D   +RVN DL N + NL SR+ S I K +DG + 
Sbjct: 298 LDPECLRYYYAAKLGSRIDDLDLNLDDFVQRVNTDLVNKLVNLASRNASFIQKRFDGKLA 357

Query: 379 TPGAFTESDESILS 392
                    +  ++
Sbjct: 358 DKLDDKMLFDEFIA 371


>gi|117919450|ref|YP_868642.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166231644|sp|A0KTW7|SYL_SHESA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117611782|gb|ABK47236.1| leucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 859

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  QN    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++ S K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 110/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y               +KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQADQMLDPTKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYTNDKGARVWVSPLDVVTTEKDDKGRVTKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASDYVAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALTAVVRLLYPIIPHVSFTLW 772

Query: 475 DILFVAD--ENRCFQSLDQ 491
           + L   +  E+  +  +D+
Sbjct: 773 NELGNTNSIEDSQWPVVDE 791


>gi|225851466|ref|YP_002731700.1| valyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646482|gb|ACO04668.1| valyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 1098

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 12/275 (4%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
             G         ++  W  +      T G+ ++    K+ F+P  L + G DI+ F    
Sbjct: 645 KCGSHNLKQEDDVLDTWFSSALWPFGTLGWPEDLKDLKS-FYPTSLLITGFDIIFFWVAR 703

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +           P             KGEK+SK+ GNVIDP+++IE+ G D+LR+ L   
Sbjct: 704 MIMMGMHFMKEKPFSDVYIHALVRDEKGEKMSKTKGNVIDPLDMIEKYGADSLRFTLAAL 763

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDE 388
            A G+D    +  ++       AN I N     ++ + K            T      D 
Sbjct: 764 AAQGRDIRLSEKRIEG--YKHFANKIWNASKFVLTNLEKYMVNSNIINEVKTLSLSYEDR 821

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            IL++    + +  + +++   +     +         D Y +  K    K T+ ++  T
Sbjct: 822 WILTLLQETIDKATKALEDYRYNDYANILYDFFWHEYCDWYLEFTKERIYKGTDQEK-KT 880

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            L V V V+ +   +L   +P L  +I+  L   D
Sbjct: 881 ALSVLVYVLDKTLRMLHPVMPFLTEEIWQKLPYKD 915



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 22/234 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            ++    +           HIGHA  M + D+  R+ R+ G + L+  G D  G      
Sbjct: 31  SDKPYFSVVMPPPNVTGSLHIGHALNMTLQDITVRYKRMKGFNTLWLPGFDHAGIATQWV 90

Query: 60  --------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
                            +        +V +     +   + L  S D     F  T ++ 
Sbjct: 91  VTRQLEAEGINKFDLGREKFIEKVWEWVPKARDTIKKQIESLGASCDWTRQRF--TLDEG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R  + ++  +G I+K  Y   +  +D    +D EV    +         PV   E
Sbjct: 149 FARAVREAFFRLYREGLIFKAPYIVNWDPKDRTAISDLEVEYKEERGNLWYIRYPVVDQE 208

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  ++    +  +        + P + R + +   +  L      R T+D
Sbjct: 209 GNETGEFITVATTRPETMLGDTAVAVNPEDERYKDLIGKRVRLPLAPEKRTTWD 262


>gi|237809562|ref|YP_002894002.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501823|gb|ACQ94416.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 861

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 34  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L +SY  D  + T   +++   +  + ++  KG +Y
Sbjct: 94  IKNNSAPAKWTYENIEYMKGQLKMLGLSYDWDRELATCTPQYYRWEQWFFTELYKKGLVY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 154 KKTSSVNWCPNDQTVLANEQVQDG----CCWRCDTPVEQKEIPQWFVKITAYAEELLTDL 209

Query: 181 ESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYV 230
           +    +   ++           GL     +  S ++FD     PD    + YV
Sbjct: 210 DKLDGWPEMVKTMQRNWIGRSEGLTMTFHVENSEQSFDIYTTRPDTLMGVTYV 262



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 103/296 (34%), Gaps = 71/296 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPK 288
           Y          D  +A  W P D ++ G +    H +Y          + ++ ++ P  +
Sbjct: 506 YCCPDYEQGMLDTDRANHWLPVDQYIGGIEHACMHLLYARFFHKLLRDSGMVKSDEPFTR 565

Query: 289 -------------------KVFSHGF-----ILHKGE------------------KISKS 306
                              +V+            KG                   K+SKS
Sbjct: 566 LLCQGMVLADAFYYTEHGARVWVSPTDVKVERDEKGRIIKAVDNEGREVIHAGMTKMSKS 625

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
             N IDP  ++E  G D +R F++          + + G+      D A      + ++V
Sbjct: 626 KNNGIDPQLMVERYGADTVRLFMMFASPADMTLEWQESGV------DGAQRFLKRLWKAV 679

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVD 425
           +              + +   +++     + + +  +++  +   + A+A V+ L++ V 
Sbjct: 680 AEHTAKGAAPELDVASLSNEQKTLRRELHKTIAKFSDDIGRRQTFNTAIAAVMELMNRV- 738

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               A+ P   ++++ DRA     +  EV+  + ++L    P +   ++  L  AD
Sbjct: 739 ----AKAP---QESDQDRA-----LVQEVLTNVVLMLYPITPHVCFHLWQALGNAD 782


>gi|182438720|ref|YP_001826439.1| valyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178467236|dbj|BAG21756.1| putative valyl-tRNA synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 873

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/358 (20%), Positives = 131/358 (36%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ +++                I P E   +        L D +
Sbjct: 353 HCSRCKTTIEPRLSLQWWVKVAPLAQAAGDAVRDGSVKIHPQE-MEKRYFDWVDNLHDWT 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEAPPTGEGWTQDSDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN---LPLPKKVFSHGFILHKGE 301
            +  D S AKF+P  + V G DIL F       F L  N    P    V         G+
Sbjct: 471 PERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGVPPFSTIVLHGMVRDEHGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +++ G DALR+ L R    G D    ++ ++    A  +N I N 
Sbjct: 530 KMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGEEWVQGS--AKFSNKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  ++ + ++     +    +    +    
Sbjct: 587 ATRFALMNGATIEGDLPPVEEMSVTDRWILSRLNKTVADVDAFYDDFQFAKISEALRHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K        P   S    V  EV+  +  LL   VP +   ++  L
Sbjct: 647 WDEVFDWYVELSKTTFFAGGRPAEVS--GRVLGEVLDVMLRLLHPIVPFVTEALWTAL 702



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPYSIVIPPPNVTGSLHLGHAFEHTLIDALVRRKRMQGFEALYQPGMDHAGIATQNV 103

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + + +  S + F  T ++ 
Sbjct: 104 VERELGKEGKSRHDLGREAFVERVWQWKNESGGQISGQMRRLGEGVAWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D G IY+      +  R     +D EV    D
Sbjct: 162 LSKAVQTVFKQMYDDGLIYRAERIINWCPRCLTAISDIEVEYQED 206


>gi|302335574|ref|YP_003800781.1| valyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319414|gb|ADK67901.1| valyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 900

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 84/430 (19%), Positives = 147/430 (34%), Gaps = 49/430 (11%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
           C     S  DE    D          +       ++    E +F  +   + +      S
Sbjct: 316 CREAIVSWFDEHGLLDHVEELDHSVMHCYRCDTALEPWLSEQWFVAVDKLKGRATEVVRS 375

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------- 221
                 P  R  +       GLKD  +SR+   WG +IP                     
Sbjct: 376 GEVKFHPA-RWTDTYLTWMDGLKDWCISRQ-LWWGHRIPVFYCEDCGWQDALMEDTGTCP 433

Query: 222 -------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
                     + ++  W  +      T G+ D+     A+  P  + V  +DI+      
Sbjct: 434 NCGGHHVHQDEDVLDTWFSSQLWTFATQGWPDDAT-ELAQHHPTKVLVTARDIIALWVAR 492

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   +   +  +P          +   G ++SKS GN ++P++++E  G DA+R+ L+  
Sbjct: 493 MIMSSLYFTGEIPFRDVYIYATILAKDGSRMSKSKGNGVNPMDLMERYGADAMRFNLLTL 552

Query: 333 IACGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTE 385
           I   +D  +D +       L      + A      +  +   +  + DG  P  P A T 
Sbjct: 553 ITNNQDVKFDANIDKKTHALIDSPRTEQARSFVTKIWNASRFVQMNLDGYAPGEPKAETP 612

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
            D  +LS  +R++ E  E ++          + S       D Y +  K   L  T  +R
Sbjct: 613 EDAWMLSRLARIVDEATEALEGYAFGDYARDMQSFFWNEVCDWYIELCKGRLLGGTPEER 672

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFMLHK 501
                   V V+     LL   +P +  K++D L  +   R   +  +D R     ML  
Sbjct: 673 LQA-QRNLVFVLDTSLRLLHPVMPFVTEKVWDALPASALGRMSATGEVDSRF---LMLAS 728

Query: 502 TFDPI-FPRF 510
             +P  F RF
Sbjct: 729 WPEPADFARF 738



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV- 67
           ++          H+GHA +  I D   R+ R+ G    +  GTD  G             
Sbjct: 35  VTIPPPNVTGILHMGHAMDDTIQDAYVRYSRMRGRSTRWILGTDHAGIATQTKVDKKLKE 94

Query: 68  ---------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILW 110
                              +  +           +   I +DD   T    +    R ++
Sbjct: 95  EGVSRLQIGREKFLEACWDWRREYGGTIVSQIKRMGCSIDFDDEKFTMSPEYARAVRKVF 154

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNPVQW 159
                +G IY+G     +    +   +DDE  Y+G +G  +  ++  V+ 
Sbjct: 155 CDWYHEGLIYRGKRIVNWCPSCKTAISDDEAEYRGEEGHLWYLRYPLVEP 204


>gi|218887851|ref|YP_002437172.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758805|gb|ACL09704.1| valyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 883

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 124/373 (33%), Gaps = 25/373 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G  Y+        +  + +    ++   A      A        E+       + Y 
Sbjct: 342 HSVGHCYRCKSVIEPHVSTQWFVAASKMAPRARTAVPAATQIFPDNWEK-------TYYN 394

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                        I    R           L     + +    G       + ++  W  
Sbjct: 395 WLDNIRDWCISRQIWWGHRIPAWTCGDCGKLIVAVDAPERCACGSANLTQDEDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
           +     +T G+ D     K  F+P  + V G DIL F    W A ++   L    +V   
Sbjct: 455 SALWPFSTMGWPDETRELKT-FYPTSVLVTGFDILFF----WVARMMMMGLHFMDEVPFR 509

Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +H      +G K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D    ++ ++
Sbjct: 510 HVYIHALVRDAEGRKMSKSTGNVIDPLEMIDKYGTDSLRFTLAAFAAMGRDIKLSEERIE 569

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQ 406
                   N + N    ++  +  D                  IL     + +     + 
Sbjct: 570 G--YRHFVNKLWNAARFALMNLPDDEVPAPVDLDTVQGLHHRWILHRLEEMKESTDAAIV 627

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A   +   +     D Y +  KP        +R +   +V + V+R+   LL  
Sbjct: 628 GYRFNDAAQGMYRFIWNEFCDWYLELIKPDMQAGG--ERKAAAQHVLLTVLRETLTLLHP 685

Query: 465 FVPKLANKIFDIL 477
            +P +  +I+  L
Sbjct: 686 IMPFITCEIWAAL 698



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA  + I D+L R  R  G  VL+  GTD  G       + 
Sbjct: 38  EPFSIVIPPPNVTGALHMGHALNLTIQDILCRHARQKGKKVLWVPGTDHAGIATQNVVER 97

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                                    + +  +     R M   +D + + F  T ++    
Sbjct: 98  GLAKEGKGRHDLGREKFIERVWEWREEYGTRILNQIRAMGASVDWTRERF--TMDEGLSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ K+ D G IYKG Y   +  R      DDEV       +      P+
Sbjct: 156 AVRQVFVKLYDDGLIYKGDYIINWCNRCHTALADDEVDHLPRKDHLWQLRYPL 208


>gi|144899871|emb|CAM76735.1| Valyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 888

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 122/358 (34%), Gaps = 43/358 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++   +      L   E+      P    N    +++  ++   +SR+   W
Sbjct: 352 IEPWLTDQWYVDAATLAKPALEAVETGKTKFHPKHWENTYYEWMR-NIQPWCVSRQ-IWW 409

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  +     P                                ++  W  +     +T G+
Sbjct: 410 GHQVPAWYGPDGHVFVEEVEAEANAAASAHYGHSVELVRDTDVLDTWFSSALWPFSTLGW 469

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      A+++P D+ V G DI+ F    +         ++P             KG+K
Sbjct: 470 PEQTP-ELARYYPTDVLVTGFDIIFFWVARMMMMGIHFMGDVPFKDIYIHALVRDEKGQK 528

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP++++++ G DA+R+ L    A G+D    +  ++     + A  + N  
Sbjct: 529 MSKSKGNVIDPLDLMDKYGCDAVRFTLAALAAQGRDIKLAEGRVEG--YRNFATKLWNAA 586

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                      DG  P  G     +  ++   +    ++ + +       A       V 
Sbjct: 587 RFCQMNECAPVDGFDPR-GVTEIVNRWVIGKVAETADKVAQALSGYRYDAAAGAAYQFVW 645

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               D Y +  KP     ++    +        V   +  +L  F+P +  +++  + 
Sbjct: 646 GTFCDWYLEFAKP-IFSGSDEAAKAETRATAAWVFDTILHILHPFMPFITEELWAQMG 702



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 22/179 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA    + DVL R+HR+ G D L+  GTD  G      
Sbjct: 31  SNQSPYTIMMPPPNVTGSLHMGHALTFTLQDVLIRYHRMAGRDALWQPGTDHAGIATQMV 90

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        +  ++          L  S D     F  T ++ 
Sbjct: 91  VERQLEAKGITRHDLGRDKFIERVWEWKGESGGTITRQLRRLGASPDWAKERF--TMDEG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                R ++  +  +G IY+      +  +     +D EV +     +      PV+ M
Sbjct: 149 LSVAVRKVFVTLYKQGLIYRDKRLVNWDPKLHTAISDLEVEQREVKGHMWHFKYPVEGM 207


>gi|156311420|ref|XP_001617781.1| hypothetical protein NEMVEDRAFT_v1g156733 [Nematostella vectensis]
 gi|156195775|gb|EDO25681.1| predicted protein [Nematostella vectensis]
          Length = 311

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/311 (26%), Positives = 136/311 (43%), Gaps = 34/311 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++  ++  I+ A+ Y N   HIGH A   + +D+ AR+ RL G DV F  G+DEHG  I+
Sbjct: 2   LENPKRYTITAALPYTNGPIHIGHLAGVYVPSDIYARYLRLQGKDVAFMCGSDEHGVAIS 61

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A+  G+T +  +D+     R       IS+D++ RT+ K HHDT +  ++K+ + G  
Sbjct: 62  MKAKKEGITPQEVIDKYDGIIRQSFLDFGISFDNYSRTSSKIHHDTAQEFFRKLYENGKF 121

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +      Y  + + +  D  V             G   +   +  N    +        
Sbjct: 122 IEQTTEQLYDAKADQFLADRFVTGTCPKCGNEEAYGDQCEKCGSSLNATDLINPKSTITG 181

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 E + +F  L+ Y   L  +     +         +V S+V  GL+  +++R   
Sbjct: 182 ETPVLKETKHWFLPLNEYDTFLREWVLEGHKNDWKSNVYGQVKSWVDGGLEPRAVTRD-L 240

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDI 267
           DWGI +P +      +YVW DA   Y++ T      +G   + +  D     +H IGKD 
Sbjct: 241 DWGIDVPVEGAEGKKLYVWFDAPIGYISATKEWAAKEGKDWEPYWKDQDTKLVHFIGKDN 300

Query: 268 LRFHAIYWPAF 278
           + FH I +PA 
Sbjct: 301 IVFHCIIFPAM 311


>gi|326779369|ref|ZP_08238634.1| Valyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326659702|gb|EGE44548.1| Valyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 873

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/358 (20%), Positives = 131/358 (36%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      ++ +++                I P E   +        L D +
Sbjct: 353 HCSRCKTTIEPRLSLQWWVKVAPLARAAGDAVRDGSVKIHPQE-MEKRYFDWVDNLHDWT 411

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPNGEVVCVGPDEAPPTGEGWSQDSDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN---LPLPKKVFSHGFILHKGE 301
            +  D S AKF+P  + V G DIL F       F L  N    P    V         G+
Sbjct: 471 PERTD-SLAKFYPNSVLVTGYDILFFWVARMMMFGLYVNDGVPPFSTIVLHGMVRDEHGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P++ +++ G DALR+ L R    G D    ++ ++    A  +N I N 
Sbjct: 530 KMSKSFGNVVNPLDWMDKYGSDALRFTLARGANPGTDVPIGEEWVQGS--AKFSNKIWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS  ++ + ++     +    +    +    
Sbjct: 587 ATRFALMNGATIEGDLPPVEEMSVTDRWILSRLNKTVADVDAFYDDFQFAKISEALRHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K        P   S    V  EV+  +  LL   VP +   ++  L
Sbjct: 647 WDEVFDWYVELSKTTFFAGGRPAEVS--GRVLGEVLDVMLRLLHPIVPFVTEALWTAL 702



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ++    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SDKPPYSIVIPPPNVTGSLHLGHAFEHTLIDALVRRKRMQGFEALYQPGMDHAGIATQNV 103

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q S   R + + +  S + F  T ++ 
Sbjct: 104 VERELGKEGKSRHDLGREAFVERVWQWKNESGGQISGQMRRLGEGVAWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K++ D G IY+      +  R     +D EV    D
Sbjct: 162 LSKAVQTVFKQMYDDGLIYRAERIINWCPRCLTAISDIEVEYQED 206


>gi|159899374|ref|YP_001545621.1| valyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892413|gb|ABX05493.1| valyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 921

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 130/377 (34%), Gaps = 48/377 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   ++ +    +F +     +  ++        I+P  R N++       ++D  
Sbjct: 369 RCERCDTIIEPLISTQWFVKTQPLAEPAMAAVREGRTKIVPE-RFNKIYFHWMENIQDWC 427

Query: 209 LSRKTFDWG--IKIPDDPQY------------------------------IMYVWIDALT 236
           +SR+   WG  I +   P                                ++  W  +  
Sbjct: 428 ISRQ-LWWGHRIPVWYGPDNQMFVELNAADAMAAATAHYGQVVELRQDEDVLDTWFSSGL 486

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +  G+ D  +    +F+P  L   G DIL F    +      L+   P         
Sbjct: 487 WPFSILGWPDVENPDFKQFYPTTLLETGYDILFFWVARMMMLGLYLTGKEPFEWVYLHGL 546

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN +DP+++IE+ G DALR+        G+D       L        
Sbjct: 547 VRDEHGRKMSKSLGNQVDPMDLIEQYGTDALRFTFATSSTPGQDFALQPTRLDSA--RSF 604

Query: 355 ANGIGNLVSRSVSMILK-------DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           AN I N     +S +           D       A+T +D  ILS  +R+  ++   M +
Sbjct: 605 ANKIWNATRFVISKLGDLPRTAESKVDAERLNAQAYTVADRWILSRFNRLAGDVERLMNS 664

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             +  A  Q+ +   +   D Y +  K  ++   +  +          V+     LL  F
Sbjct: 665 FNLGEAGRQIQTFFWDEFADWYIETAK-IQIDTGDEQQQLRTRETLYSVLEGTLRLLHPF 723

Query: 466 VPKLANKIFDILFVADE 482
           +P ++   +  L  +++
Sbjct: 724 MPFVSEAAWQKLHNSEQ 740



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I+          H GH     I D+L R+HR+ G   L+  GTD  G       
Sbjct: 46  TKAPFVIAIPPPNVTGVLHTGHGLTNTIEDILTRWHRMLGQPTLWVPGTDHAGIATQNVV 105

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        +  ++     +    L  S D      T ++    
Sbjct: 106 EKQLAKVGKTRHDLGREDFLDAVWEWKGRSHSTITNQIRRLGSSVDWQRERFTLDEGLSQ 165

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + +K++ D G IY+G     +  R  +  +D EV    +
Sbjct: 166 AVVVAFKRLYDDGLIYRGTRLVNWCPRCLSAISDLEVVYRDE 207


>gi|197104810|ref|YP_002130187.1| valyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478230|gb|ACG77758.1| valyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 893

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 118/356 (33%), Gaps = 43/356 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + ++          +   E      +P         +++  ++   +SR+   W
Sbjct: 352 VEPYLTDQWYVNAEVLAKPAIKAVEQGDTVFVPKAWEKTYFEWMR-NIQPWCISRQ-LWW 409

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 410 GHRIPAWYGPDGKVFVAESEAEARRQAAELYGRDVDLRQDEDVLDTWFSSGLWPFSTMGW 469

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +  +   A+F+P    V G DI+ F    +       +  +P  +   +       G K
Sbjct: 470 PEQTE-DLARFYPTHTLVTGFDIIFFWVARMMMQGLHFTGQVPFQRVFINALVRDATGAK 528

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+E+++E G DALR+ L       +D    K  ++     +    + N  
Sbjct: 529 MSKSKGNVMDPLELVDEFGADALRFTLTAMSGQARDIKLSKQRIEG--YRNFGTKLWN-A 585

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M                  +  I+   +R  + + + + +     A  Q+   + 
Sbjct: 586 TRFCQMNGCARAEGFDPAAVQAPLNRWIVGETARTARAVTDALADCGFDEAATQLYRFIW 645

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP  L   +    +        V+  +  LL   +P +  +++  
Sbjct: 646 NRFCDWYVELAKP-LLNGEDAAAKAETQATAAWVLDVILKLLHPVMPFITEELWGQ 700



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 23/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           HIGHA    + DVL RF R+ G   L+  GTD  G       + 
Sbjct: 34  EPFSIVIPPPNVTGSLHIGHALNNTLQDVLIRFERMRGKAALWLPGTDHAGIATQMVVER 93

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +           R +    D S + F  T ++   
Sbjct: 94  QLAQEGNQSRRDMGREAFVEKVWEWKAKSGGTIVNQLRRLGASCDWSRERF--TLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++ ++  +  IY+      +    +   +D EV       +Y     P++
Sbjct: 152 AAVRKVFVQLYREKLIYRDKRLVNWDPHFQTAISDLEVEPREVDGHYWHFAYPLE 206


>gi|228965178|ref|ZP_04126272.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794412|gb|EEM41924.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 1033

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTNETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYNVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKN 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|229079379|ref|ZP_04211921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228703912|gb|EEL56356.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 1033

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|228920925|ref|ZP_04084263.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838714|gb|EEM84017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 1033

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|57234777|ref|YP_181174.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|90103540|sp|Q3Z9C5|SYV_DEHE1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57225225|gb|AAW40282.1| valyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 880

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 52/365 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++ M  + +F ++       L    S    ILP  R  +V       ++D  
Sbjct: 350 HCQRCSAVIEPMVSKQWFVKMEPLAKPALEAVNSGRIQILPE-RFTKVYQNWMENIRDWC 408

Query: 209 LSRKTFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTT 241
           +SR+   WG  I +   P                           ++  W  +     +T
Sbjct: 409 ISRQ-LWWGHRIPVWYCPCGEMIVSKEDPTACPKCGSTKLEQDPDVLDTWFSSGLWPHST 467

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--- 298
            G+ D  +  K +F+P  +     DI+ F    W A ++   +   K+V      LH   
Sbjct: 468 LGWPDQTEDLK-RFYPGSVLETAYDIIFF----WVARMIVMGIEDMKEVPFRTVYLHGLI 522

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              KGEK+SK+ GNVIDP++VI++ G DALR+ +    + G D    +  L+   N    
Sbjct: 523 RDDKGEKMSKTKGNVIDPLKVIDQYGTDALRFAVTFGTSPGNDSKLGQTKLEAARN--FV 580

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N + N  SR V M L +   ++P  G     D  ILS  +RV  ++   M+      A  
Sbjct: 581 NKLWN-ASRFVIMNLGEEKELLPEAG-LPLEDRWILSRMNRVTADVIRLMEEFQFGEAQR 638

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANK 472
            +   V     D Y +  K         D AS     V V+V+  +  LL  ++P +  +
Sbjct: 639 VLQDFVWGEFCDWYIELAKVRL-----RDEASVSPRPVLVKVLSTILRLLHPYMPFITEE 693

Query: 473 IFDIL 477
           ++  L
Sbjct: 694 LWSYL 698



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK---- 57
            +++   I         + H+GHA    + D++ R+HR+ G   L+  G D  G      
Sbjct: 39  SDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMLGEPALWLPGADHAGIAAQVV 98

Query: 58  IAKAAQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
           + +     G T +             +V+      R     L  S  +D    T +    
Sbjct: 99  VERMLAKQGKTRQELGRELFLEKMWEWVNPCRERIRHQHMRLGASCDWDRETFTLDPGPV 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  +  KG IY+G     +  R     +D EV       +      P++
Sbjct: 159 KAVREIFTNLYQKGLIYRGERIINWCPRCATAVSDLEVDHKDLAGHIWHLRYPLE 213


>gi|229069741|ref|ZP_04203026.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228713362|gb|EEL65252.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 1033

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|242214731|ref|XP_002473186.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727688|gb|EED81599.1| predicted protein [Postia placenta Mad-698-R]
          Length = 397

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 130/394 (32%), Gaps = 51/394 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAY-EMIIADVLARFHR------LDGLDVLFTTGTDEH 54
           +  E + I++A+ Y N  PH+G+     + AD+ AR HR            L+  GTDE+
Sbjct: 4   EGEENVLITSALPYCNNVPHLGNIIGSTLSADIFARAHRSHRMLGTRNRRTLYICGTDEY 63

Query: 55  GQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
           G      A   G+T K   D+ +    +      +S+D F RT+   H + C+ ++  + 
Sbjct: 64  GTATETQALKEGITPKELCDKYNALHVETYKWFQLSFDHFGRTSTPLHTEICQEIYLNLL 123

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEE 163
             G + K      Y      +  D  V            +G      +   + V  +   
Sbjct: 124 KNGYLDKQIKEQTYCEGCSKFLADRFVEGTCPHCGADDARGDQCDVCSRTLDAVDLINPR 183

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL------------------- 204
               +      +  ++     + + P        S+                        
Sbjct: 184 CLISKAHTVTTRSSAHMYVKLDALQPKVEEWIRKSWKDGKWSPNAVINAEGELIDARLKA 243

Query: 205 -KDLSLSRKTFDWGIKI--------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
               S   +   WG+ +              ++YVW DA   Y + T    +        
Sbjct: 244 GMRPSPVTRDLTWGVPVPVVEGEDDQGMKGKVLYVWFDAPIGYPSITANYTSEWKQWWFN 303

Query: 256 WPAD--LHVIGKDILRFHAIYWPAFLLSANLPLPK--KVFSHGFILHKGEKISKSLGNVI 311
            P       +GKD + FH I+WP+  +    P      + +  ++ ++G K SKS    +
Sbjct: 304 KPDVRLYQFMGKDNVYFHTIFWPSIQIGDGRPWTTLYHLSTTEYLNYEGGKFSKSHNRGV 363

Query: 312 D-PIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             P      +     RY+L+       D  +   
Sbjct: 364 FGPAARETGIPPSVWRYYLISTRPETADAMFSWS 397


>gi|86357439|ref|YP_469331.1| valyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281541|gb|ABC90604.1| valyl-tRNA synthetase (valine-tRNA ligase) protein [Rhizobium etli
           CFN 42]
          Length = 947

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 134/358 (37%), Gaps = 29/358 (8%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +  +  +   + +      +     H    W   +G  F     ++ L +  + +     
Sbjct: 425 NWENTYFNWLENIEPWCISRQLWWGHRIPAWYGPDGQVFVEKTEEEALQAAIQHYLSHEG 484

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P++   E +              + F  G  +  D   ++  W  +     +T G+ D  
Sbjct: 485 PMKAYVEDLL-------------ENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPDET 530

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHK-G 300
               A+++P ++ V G DI+ F  +      L          +     ++ H  +  K G
Sbjct: 531 P-ELARYYPTNVLVTGFDIIPFWVVRMMQMGLHFMKDENGDPVEPFHTIYIHALVRDKNG 589

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +      +    + N
Sbjct: 590 QKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN 647

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R   M     D       A    +  IL+  +R  +++ E ++    + A   +   
Sbjct: 648 -ATRFAEMNGAKSDPHFVPEAAELTINRWILTELARTERDVTEALEAFRFNDAAGALYRF 706

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V     D Y +  KP      +    +     +  ++ ++  LL  F+P +  +++  
Sbjct: 707 VWNEVCDWYLELLKP-VFSGDDEGAKAEAQACSAYILEEIYKLLHPFMPFMTEELWAH 763



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 23/183 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D++ RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRREMGREAFIDKIWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++  +  +G IYK      +  +     +D EV +     +      P++     
Sbjct: 154 QAVLEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDMEVEQHEVKGHLWHLRYPLEPGVTY 213

Query: 164 GYF 166
            Y 
Sbjct: 214 QYP 216


>gi|229127608|ref|ZP_04256597.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|84029507|sp|Q81E30|SYI2_BACCR RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|228655685|gb|EEL11534.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 1033

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|239831824|ref|ZP_04680153.1| valyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824091|gb|EEQ95659.1| valyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 910

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 132/384 (34%), Gaps = 51/384 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++   +      ++        I+P 
Sbjct: 352 MDERGYLEKIEDHTHAVPHGDRGGVPIEPYLTDQWYVNAAELAKPAMAAVRDGTTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGKCFVEKSEEEAKASARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VVLERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M     D       A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLDAGFKPENARLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             ++  + + E + N   + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTKATRAVTEGIDNYRFNEAAGAAYRFVWNQFCDWYLELLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
               + Q+  LL  F+P +  +++
Sbjct: 701 AAYCLDQIYKLLHPFMPFMTEELW 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                +           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERQEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVSLYKQGLIYRDKRLVNWDPKLLTAISDIEVESRETKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|229059882|ref|ZP_04197257.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719427|gb|EEL71030.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 1033

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 143/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTTE         + +      D            R   +    E     +        
Sbjct: 404 IRTTE---------IKETFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFSPKSIAELRKHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    NP++A+   
Sbjct: 680 SRLHSTTRKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNPEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWNILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|309791315|ref|ZP_07685838.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226625|gb|EFO80330.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 905

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 131/347 (37%), Gaps = 34/347 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  E +F +     D  L+        I+P  R  +V       ++D  +SR+   W
Sbjct: 380 IEPLLSEQWFVKTRPLADLALAAVREGRTKIIPE-RFEKVYYHWMENIEDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I +   P                      ++  W  +     +T G+ +      A 
Sbjct: 438 GHRIPVWYMPDGTMLVLGPDETPPEGAVQDPDVLDTWFSSGLWPFSTLGWPEQTP-DLAT 496

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P  +   G DI+ F    +      L+   P              G K+SKS GNV++
Sbjct: 497 YYPTSVMETGYDIIFFWVARMMMLGCYLTGTEPFHTIYLHGLVRDEHGRKMSKSYGNVVN 556

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+EV++  G DALRY L      G+D   +   ++   N   AN I N+    +S  ++ 
Sbjct: 557 PLEVMDAQGTDALRYTLATSGTPGQDLNLNPQRIEAARN--FANKIWNITRFVISKGVRS 614

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDA 430
            D   P     + +D  ILS   R+  +    ++      A  Q+   +     D Y + 
Sbjct: 615 SDANNPLTM-LSLADRWILSRYHRLCLDSDRLLEGYNFGEAGRQMHDFLWGEFADWYVEI 673

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            K     + + ++ +T   V   V+     LL  ++P +  +++  L
Sbjct: 674 AK--VQLEGSAEQQATTRAVLYTVLEGTLRLLHPYIPFITEEVWQYL 718



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 63/184 (34%), Gaps = 21/184 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    IS        + H+GHA  + I D++ R+ R+ G   L+  GTD  G       +
Sbjct: 45  KPPFVISIPPPNVTGELHLGHAMFVTIEDLMIRWRRMQGYQTLWVPGTDHAGIATQTLVE 104

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
               +                T  +  +     ++    L  S D      T ++    +
Sbjct: 105 KLLRSEGTSREQVGREEFLRRTWEWKAKYGGEIQNQLRRLGASCDWERERFTLDEGLSRS 164

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV---QWMEE 162
            +  +K++ D G IYKG Y   +S   +   +D EV              PV    W   
Sbjct: 165 VQTAFKRLYDDGLIYKGTYLVNWSPNLQTAVSDLEVEFETRQVSIWHVRYPVINADWAGP 224

Query: 163 EGYF 166
           +  +
Sbjct: 225 QHPW 228


>gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 875

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 144/382 (37%), Gaps = 43/382 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +       ++    E +F + +    K +   +S      P  R  ++       +KD  
Sbjct: 342 HCYRCKTVIEPYVSEQWFVKSAPLAKKAIDAVKSDIIQFFPE-RWEKIYFDWLENIKDWC 400

Query: 209 LSRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLT 240
           +SR+   WG +IP                               + ++  W  +     +
Sbjct: 401 ISRQ-IWWGHRIPAWYCNNCNEIIVSEDEPKKCPKCNSSDLRQDEDVLDTWFSSSLWPFS 459

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           T G+ DN    K KF+P  + V G DI+ F    +   +  L+   P    +        
Sbjct: 460 TMGWPDNTPELK-KFFPTSVLVTGFDIIYFWVARMIMMSIALTGKEPFKNVIIHGLVRDS 518

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIACGKDGFYDKDGLKKRVNADLANG 357
           +G K+SKS+GNVIDP+++IEE G DALR+ L       G+D    K+ +K   N   AN 
Sbjct: 519 QGRKMSKSVGNVIDPMDIIEESGADALRFSLASLSNPAGQDIKMSKEKVKGARN--FANK 576

Query: 358 IGNLVSRSVS--MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           + N     +       +Y+  I         D  ILS    V++ + + +       A  
Sbjct: 577 LWNTARFVLGYEKYFTNYNISIEDINDMEPEDIWILSRSISVIKNLCQKLDEYNFSAAST 636

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +V + + +   D Y +  K       N      +  V   V +Q  I+L  F+P +   +
Sbjct: 637 EVYNFIWDEFCDWYIELTKFR--INNNFKSVLAIK-VLFYVFKQSLIMLHPFMPFITEDL 693

Query: 474 FDILFVADENRCFQSLDQRLKP 495
           +  L     +  F++L +   P
Sbjct: 694 YRRLPENKGSITFETLKKFDYP 715



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I           H+GHA +  + D++ R+ RL G +VL+  GTD  G      
Sbjct: 30  SDKKAFSIVIPPPNVTGSLHLGHALDDTLQDIICRYKRLRGYEVLWLPGTDHAGIATQNV 89

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +Q  +   +    L  S  +D    T ++   
Sbjct: 90  VEKMLQKKGITRHQLGREKFVEKVWEWKEQYGQRIINQLKSLGASCDWDRERFTMDEVLS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            + +  +  + + G IYKG     +  R      D EV  
Sbjct: 150 KSVKKAFVTLYNMGLIYKGTRIINWCPRCSTALADLEVEH 189


>gi|229017502|ref|ZP_04174403.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229023717|ref|ZP_04180208.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228737578|gb|EEL88083.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228743826|gb|EEL93927.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 1033

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 142/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTTE         + +      D            R   +    E     +        
Sbjct: 404 IRTTE---------IKETFLRNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|229144806|ref|ZP_04273203.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296502780|ref|YP_003664480.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228638528|gb|EEK94961.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296323832|gb|ADH06760.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 1033

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 141/361 (39%), Gaps = 18/361 (4%)

Query: 131 RDEAYYNDDEVYKGADGQYY----NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           +D    N+D V    D   +        N V W      ++       +  S        
Sbjct: 410 KDTFLQNNDSVTWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESCDHQFAPK 469

Query: 187 ILPIERRNEVISFVK----SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
            +   R+N      +           +       G  +   P+ ++ VW D+ +      
Sbjct: 470 SIAELRKNSTKETPEDLELHKPYVDEVQVCCGKCGGTMNRTPE-VIDVWFDSGSMPFAQY 528

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G
Sbjct: 529 HYPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEG 588

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN +DP++++++ G DALR+ L+ + A      + +  + +   +   + + N
Sbjct: 589 QKMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVN 647

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +
Sbjct: 648 VYSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAA 707

Query: 420 LVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           LV EV + Y      + WE    N ++A+       EV+  ++ L+  F P +A  I   
Sbjct: 708 LVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHEVLVTISKLIAPFTPFVAEDIHLN 765

Query: 477 L 477
           L
Sbjct: 766 L 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|116626598|ref|YP_828754.1| valyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122251483|sp|Q01PF1|SYV_SOLUE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|116229760|gb|ABJ88469.1| valyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 855

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 125/360 (34%), Gaps = 51/360 (14%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +    PV+ +    +F +     +K ++  ES     +P         ++   ++D  +
Sbjct: 345 CDRCKTPVEPLISTQWFVKTKPLAEKAIAVVESGEIGFVPQNWTKTYYEWM-YNIRDWCV 403

Query: 210 SRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTT 241
           SR+   WG +IP                                 ++  W  +     +T
Sbjct: 404 SRQ-LWWGHRIPAWHCGECKEIIVAREAPKACPRCASENLTQDTDVLDTWFSSGLWPFST 462

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ D      AK++P  L + G DIL F    +          +P  +           
Sbjct: 463 LGWPDQTA-DLAKYYPTTLLITGFDILFFWVARMVMFGLEFMGEVPFKQVYIHGLVRDAD 521

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            +K+SK+ GNVIDP+ V E+ G DA+R  L++  A G D    ++ ++       AN I 
Sbjct: 522 RQKMSKTKGNVIDPLVVTEKYGTDAVRMALLQGAAPGTDIVLTEERMESS--RAFANKIW 579

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    +   +  + D     P   T  D  I+S  +   +     ++    H    ++  
Sbjct: 580 N----AARFLFMNADQSAAAPAEPTIEDRWIVSRLNAAAETANRAIEQYRYHELAQELWK 635

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  D Y + +K           ++T     V        LL   +P L  +++  L
Sbjct: 636 FFWHEFCDWYLELKKV----------SATGWGNAVAAFETALRLLHPAMPFLTEELWQRL 685



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 52/166 (31%), Gaps = 22/166 (13%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----KAAQNAGV 67
                    HIGH  E    DV  R+HR+ G + L+  GTD  G        +  +  G+
Sbjct: 42  PPPNVTGVLHIGHMLEHTEIDVSTRWHRMLGDNTLWLPGTDHAGIATQMVVARQLKEEGI 101

Query: 68  TTKVFVDQNSRNFRDMADV----------------LDISYDDFIRTTEKRHHDTCRILWK 111
             +    +                            D S + F  T +       R ++ 
Sbjct: 102 NYRDLGREKFEERVWQWKAQSGDTIKRQMVRLGASCDWSRERF--TLDPGLSRAVREVFV 159

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            + ++G +Y+G Y   +        +D EV       +      PV
Sbjct: 160 SLYERGLLYRGEYMTNWCPSCNTAISDLEVAHADVAGHLWHIRYPV 205


>gi|229178578|ref|ZP_04305942.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228604736|gb|EEK62193.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 1033

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 141/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|15827774|ref|NP_302037.1| valyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230251|ref|YP_002503667.1| valyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|81537016|sp|Q9CBY7|SYV_MYCLE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13093326|emb|CAC30422.1| valyl-tRNA synthase [Mycobacterium leprae]
 gi|219933358|emb|CAR71566.1| valyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 886

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 119/360 (33%), Gaps = 52/360 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ R+ +          +    I P    +   ++V   ++D  +SR+   W
Sbjct: 362 IEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMESRWFAWVDD-MRDWCISRQ-LWW 419

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+         K
Sbjct: 420 GHRIPIWYGPNGEQVCVGPDETPPEGWQQDPDVLDTWFSSALWPFSTLGWPQMTP-ELEK 478

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHKG 300
           F+P  + V G DIL F                           +P              G
Sbjct: 479 FYPTSILVTGYDILFFWVARMMMLGTFVGGDDAITLGGCRGPQVPFTDVFLHGLIRDEFG 538

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVIDP+  ++  G DALR+ L R  + G D    +D +  R + +    + N
Sbjct: 539 RKMSKSRGNVIDPLAWMDMFGADALRFTLARGSSPGGDLAIGEDHV--RASRNFGTKLFN 596

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R   +        +P   A T++D  IL    +V  E+          RA   +   
Sbjct: 597 -ATRYALLNGAAL-VPLPALTALTDADRWILGRLEQVRAEVDSAFDGYEFSRACEALYHF 654

Query: 421 VSE--VDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   D Y +      L K    D  +    V    +  L  LL   +P +   ++  L
Sbjct: 655 AWDEFCDWYLE------LAKAQLADGLTHTTAVLAAALDTLLRLLHPVMPFITETLWQAL 708



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 56/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 41  STKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSV 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +       +   R + D +D S D F  T +  
Sbjct: 101 VEKQLAINGKIKEDFGRELFVDKVWDWKRESGGAIAGQMRRLGDGVDWSRDRF--TMDDG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R+++K++ D G IY+      +S       +D EV   
Sbjct: 159 LSRAVRMIFKRLYDAGLIYRAERLVNWSPVLRTALSDIEVIYD 201


>gi|254482596|ref|ZP_05095835.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037287|gb|EEB77955.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 819

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y      YP+ + H+GH     IADV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  SREKFYCLAMFPYPSGKLHMGHVRNYTIADVIARYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  QN    R+    L  +Y  D  I T +  ++   +  + ++ +KG  Y
Sbjct: 91  IKNNVPPAHWTAQNIDYMREQLRQLGFAYDWDREIATCDPDYYRWEQWFFTRLFEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G          NPV+  E + +F +++ Y ++LL+  
Sbjct: 151 KKKAEVNWCETDQTVLANEQVVDG----CCWRCDNPVERREIDQWFIKITDYAEQLLTDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   +            G
Sbjct: 207 DKLDQWPEQVRTMQRNWIGRSEG 229



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 100/266 (37%), Gaps = 32/266 (12%)

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKK 289
           Y          DG    + P D +V G +    H +Y   +         +S++ P   +
Sbjct: 508 YGCAKNDQAMLDGEADYWTPVDQYVGGIEHAILHLLYSRFYHKLLRDEGLVSSDEPFI-R 566

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + + G +L  G K+SKS GN +DP  +I++ G D +R F +      +   +   G++  
Sbjct: 567 LLTQGMVLKDGAKMSKSKGNTVDPQSLIDQYGADTVRLFSMFAAPPEQSLEWSDSGVEGA 626

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                   +  LV R     L      +      T+  ++        + ++ ++   + 
Sbjct: 627 NR--FLKRLWKLVHR----HLAAEPAPVLDTATLTDQQKNARRKTHETIGKVNDDYGRRQ 680

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A ++ L +E+                 D ++    V  E +R + ++L    P 
Sbjct: 681 TFNTAIAAIMELCNEL--------------GKLDDSAQSRAVMDEALRAVVLMLGPITPH 726

Query: 469 LANKIFDILFVADE--NRCFQSLDQR 492
           + + ++ +L    +  N  +   D+ 
Sbjct: 727 VCHTLWPMLGGEGDVLNAAWPVADEA 752


>gi|47570085|ref|ZP_00240744.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553246|gb|EAL11638.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 1033

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 79/456 (17%), Positives = 157/456 (34%), Gaps = 29/456 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA-----DVLDISY 91
           +  +    V F    DE G+         G   K       R           +  + SY
Sbjct: 325 YRVVQSEGVSFLHVVDEKGEYTEAVPFLKGKFVKDCDVDIVRYLAKEGLLYHKEKYEHSY 384

Query: 92  DDFIRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWY-SLRDEAYYNDDEVYKGADG 147
               R      +            I D         + +   ++   +    E     + 
Sbjct: 385 PHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDTVTWYPDHMKHGRFGKFLENMVDWNI 444

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   E E        +  K ++    H     P                  
Sbjct: 445 SRNRYWGTPLNVWECESC---DHQFAPKSIADLRKHSMKETPE-------DLELHKPYVD 494

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            +       G  +   P+ ++ VW D+ +       Y         + +PAD+   G D 
Sbjct: 495 EVQVCCEKCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQ 553

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+++   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DAL
Sbjct: 554 TRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADAL 613

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFT 384
           R+ L+ + A      + +  + +   +   + + N+ S   +   L +Y+         T
Sbjct: 614 RWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKQT 672

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNP 441
           + DE +LS      +++R  + +     A  ++ +LV EV + Y      + WE    N 
Sbjct: 673 KLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNA 731

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++A+       EV+  ++ L+  F P +A  I   L
Sbjct: 732 EKAAA-YETLHEVLVTISKLIAPFAPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|223939187|ref|ZP_03631069.1| valyl-tRNA synthetase [bacterium Ellin514]
 gi|223892140|gb|EEF58619.1| valyl-tRNA synthetase [bacterium Ellin514]
          Length = 882

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/351 (20%), Positives = 131/351 (37%), Gaps = 38/351 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E +F +  + Q            F    ER  +V       ++D  +SR+   
Sbjct: 360 PIEPRLSEQWFLKYPSTQPAREVASSGEMRFF--PERWGKVYDHWMQNIQDWCISRQ-LW 416

Query: 216 WGIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           WG +IP                     DP  ++  W  +         +    + +KAKF
Sbjct: 417 WGHQIPVWYRGHEVKCQVDSPGADWKQDPD-VLDTWFSSWLWP-----FATMDEATKAKF 470

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  + V G DI+ F    +    F  +   P      +      +G K+SK+LGN  DP
Sbjct: 471 YPTSVLVTGPDIIFFWVARMIMAGFEYTGKKPFSDVYLTGIIRDKQGRKLSKTLGNSPDP 530

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +E+I + G D LR+ ++R    G+D  +D+  ++  +  +  N + N        +    
Sbjct: 531 LELIGKYGADGLRFGIMRSAPLGQDVLFDEKDVE--LGRNFCNKLWNACR--FRQMQDGE 586

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                 P   T  D+ IL   +  ++E+  ++       A   +         D Y +A 
Sbjct: 587 VQGEINPSKLTGDDKWILLRLNTAIEELNTSLAEYKFSEATQTLYRFFWSEYCDWYVEAS 646

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           K   L  T+    +  L V   V+     L   FVP +  +++  +  + E
Sbjct: 647 KA-VLHGTDEAAKANTLAVLDFVLSHTLRLFHPFVPFITEELWHDMGYSSE 696



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GH     I D+L+R  R++G +VL+  GTD  G      
Sbjct: 33  SKKPAYSIVIPPPNVTGILHLGHVLNNTIQDILSRKARMEGKEVLWLPGTDHAGIATQTM 92

Query: 62  AQNAGVTTK-------------VFVDQNSRNF--------RDMADVLDISYDDFIRTTEK 100
            +      +               V +             + +    D S + F  T + 
Sbjct: 93  VERKIKKEEGLKRYDLGREKFLERVWEWKEKHGGIIISQLKKLGCSCDWSRERF--TMDP 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +       +  + +KG IYKG     +        +D+EV  
Sbjct: 151 EYSRRVAETFVDLYNKGLIYKGKRMVNWCPVSLTALSDEEVIM 193


>gi|30020298|ref|NP_831929.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29895848|gb|AAP09130.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus cereus
           ATCC 14579]
          Length = 1035

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 406 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 453

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 454 TPLNVWECESC---DHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCGK- 504

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 505 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 562

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 563 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 622

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 623 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 681

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 682 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 739

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 740 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 768



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 48  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 107

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 108 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 167

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 168 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 200


>gi|190891500|ref|YP_001978042.1| valyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|190696779|gb|ACE90864.1| valyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 947

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 131/381 (34%), Gaps = 67/381 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E +F          L          +P    N   ++++  ++   +SR+   
Sbjct: 390 PIEPRLTEQWFVDNKTLGQPALDSVREGRTRFIPRNWENTYFNWLE-NIEPWCISRQ-LW 447

Query: 216 WG--IKIPDDPQY----------------------------------------------- 226
           WG  I     P                                                 
Sbjct: 448 WGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYLSHEGPMKAYVEDLLENFKPGEILTRDE 507

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN-- 283
            ++  W  +     +T G+ D      A+++P ++ V G DI+ F  +      L     
Sbjct: 508 DVLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIPFWVVRMMQMGLHFMKD 566

Query: 284 -----LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                +     V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A G+
Sbjct: 567 DNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGR 626

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D   D   +      +    + N  +R   M     D       A    +  IL+  +R 
Sbjct: 627 DVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTELART 683

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +++ E ++    + A   +   V     D Y +  KP      +    +     +  ++
Sbjct: 684 ERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDAGAKAEAQACSAYIL 742

Query: 456 RQLAILLQAFVPKLANKIFDI 476
            ++  LL  F+P +  +++  
Sbjct: 743 EEIYKLLHPFMPFMTEELWAH 763



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 23/176 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRREMGREAFIDKIWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                ++  +  +G IYK      +  +     +D EV +     +      P++ 
Sbjct: 154 QAVLEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDMEVEQHEVKGHLWHLRYPLEP 209


>gi|209549076|ref|YP_002280993.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534832|gb|ACI54767.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 947

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/381 (18%), Positives = 130/381 (34%), Gaps = 67/381 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E +F          L          +P    N   ++++  ++   +SR+   
Sbjct: 390 PIEPRLTEQWFVDNKTLGQPALESVREGKTRFIPRNWENTYFNWLE-NIEPWCISRQ-LW 447

Query: 216 WG--IKIPDDPQY----------------------------------------------- 226
           WG  I     P                                                 
Sbjct: 448 WGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYLSHEGPMKAYVEDLLENFKPGEILTRDE 507

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN-- 283
            ++  W  +     +T G+ D      A+++P  + V G DI+ F  +      L     
Sbjct: 508 DVLDTWFSSALWPFSTLGWPDQTP-ELARYYPTSVLVTGFDIIPFWVVRMMQMGLHFMKD 566

Query: 284 -----LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                +     ++ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A G+
Sbjct: 567 ENGDPVEPFHTIYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGR 626

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D   D   +      +    + N  +R   M     D       A    +  IL+  +R 
Sbjct: 627 DVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTELART 683

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +++ E ++    + A   +   V     D Y +  KP      +    +     +  ++
Sbjct: 684 ERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDEGAKAEAQACSAYIL 742

Query: 456 RQLAILLQAFVPKLANKIFDI 476
            ++  LL  F+P +  +++  
Sbjct: 743 EEIYKLLHPFMPFMTEELWAH 763



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 23/183 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D++ RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRREMGREAFIDKIWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++  +  +G IYK      +  +     +D EV +     +      P++     
Sbjct: 154 QAVLEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDMEVEQHEMKGHLWHLRYPLEPGVTY 213

Query: 164 GYF 166
            Y 
Sbjct: 214 QYP 216


>gi|316934221|ref|YP_004109203.1| valyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601935|gb|ADU44470.1| valyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 957

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 99/255 (38%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D       +++P D+ V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDETP-ELDRYYPTDVLVTGFDIIFFWVARMMMMGLHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D   
Sbjct: 551 DDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLNLIDQYGADALRFTLAAMAAQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N   R   M             A    +  I     R ++E+
Sbjct: 611 ATSRVEG--YRNFATKLWN-ACRFAEMNGCAAAKDFDFTAAKDTLNRWIAHETVRAVREV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E +++   + A       V     D Y +  KP  L   +    +    +      ++ 
Sbjct: 668 TEAIESYRFNDAAEAAYRFVWNVYCDWYLELAKP-VLMGEDGAAKTETRAMVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+P +  +++
Sbjct: 727 KILHPFMPFITEELW 741



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 23/174 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +  
Sbjct: 37  PYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQ 96

Query: 66  GVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +               V Q             + +    D S + F  T ++    
Sbjct: 97  LMERQEPSRRDMGRAKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDEGLSR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++ ++  +G IYK      +  +     +D EV +            P++
Sbjct: 155 AVAKVFVELHRQGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGSLWHLRYPIE 208


>gi|91792159|ref|YP_561810.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91714161|gb|ABE54087.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 872

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 39  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 99  AINNKTSPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGMV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G           PV   E   +F +++ Y ++LL+ 
Sbjct: 159 YKKTSSVNWCPNDETVLANEQVQDG----CCWRCDTPVIQKEIPQWFIKITDYAEELLND 214

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G+     +  S ++FD     PD    + YV I A 
Sbjct: 215 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFKVKDSEQSFDIYTTRPDTLMGVTYVAIAAG 273



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 106/320 (33%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 505 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 564

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 565 VNSNEPAKRLLTQGMVLADAYYYTNDKGARVWVSPLEAEVVEKDDKGRVVKAVDSQGNEL 624

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 625 VYTGMSKMSKSKNNGIDPQTMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 682

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  V                 + S +++     + + ++ +++  +   + A+
Sbjct: 683 KRLWKLASDHV----AAGPTEALDVSKLSSSQKALRRELHKTIAKVSDDIGRRQMFNTAV 738

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P  ++    +  E +  +  LL   +P ++  ++
Sbjct: 739 AAVMELMNHLSK-------------APQDSAQDRALLAEALSAVTRLLYPIIPHMSFTLW 785

Query: 475 DILFVAD--ENRCFQSLDQR 492
             L  ++  E+  +  +D+ 
Sbjct: 786 HELGNSNNIEDSRWPDVDEA 805


>gi|224065184|ref|XP_002301705.1| predicted protein [Populus trichocarpa]
 gi|222843431|gb|EEE80978.1| predicted protein [Populus trichocarpa]
          Length = 951

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 125/358 (34%), Gaps = 22/358 (6%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  +   E     ++  + L  +R+ 
Sbjct: 416 PERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKNCEEDYIVARNADEALEKAREK 475

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
           +   ++I  DP  ++  W  +     +T G+ D       KF+P  +   G DIL F   
Sbjct: 476 YGKNVEIYQDPD-VLDTWFSSALWPFSTLGWPDVSAEDFKKFYPTTMLETGHDILFFWVA 534

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +       +  +P             +G K+SK+LGNVIDP++ I+E G DALR+ +  
Sbjct: 535 RMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPLDTIKEFGTDALRFTISL 594

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE--- 388
             A G+D     + L    N    N + N     +  +    D          + D+   
Sbjct: 595 GTA-GQDLNLSTERLTA--NKAFTNKLWNAGKFVLQNMPSQTDVSAWEAIRNCKFDKEES 651

Query: 389 ---------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                     ++S    ++  +  +           ++         D Y +A K    +
Sbjct: 652 VLRLPLPECWVVSELHVLIDMVTASYDKFFFGDVGREIYDFFWSDFADWYIEASKARLYQ 711

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  S    V + V + +  LL  F+P +  +++  L    E        Q   P
Sbjct: 712 SGANSACSEAQAVLLYVFKNVLKLLHPFMPFVTEELWQALPDPKEALIVSPWPQTSLP 769



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +S          H+GHA  + + D++ R++R+ G   L+  GTD  G       + 
Sbjct: 67  DPFVVSMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVEK 126

Query: 65  AGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
              +            F  +                + +    D + + F  T +++   
Sbjct: 127 MLASEGIKRTDLSRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTRERF--TLDEQLSQ 184

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    + K+ +KG IY+G Y   +S   +   +D EV  
Sbjct: 185 SVIEAFIKLHEKGLIYQGSYLVNWSPNLQTAVSDLEVEY 223


>gi|298291906|ref|YP_003693845.1| valyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928417|gb|ADH89226.1| valyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 945

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 10/258 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D     K +++P  + + G DI+ F    +        
Sbjct: 508 DEDVLDTWFSSALWPFSTLGWPDETPELK-RYYPTSVLITGFDIIFFWVARMMMMGLHFM 566

Query: 282 ANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            ++   K V+ H  +   KG K+SKS GNVIDP++++E+ G DALR+ L    A G+D  
Sbjct: 567 DDVVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADALRFTLAAMAAQGRDIK 626

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                ++     + A  + N  +R   M     D         +     IL    +  +E
Sbjct: 627 LATSRVEG--YRNFATKLWN-AARFAEMNGCGRDAAFDPRKVESTLARWILGETQKAGEE 683

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           I E +     + A       V     D Y +  KP      +    +     T  V+ ++
Sbjct: 684 ITEAIGAYRFNEAAGAAYRFVWNIFCDWYLELAKP-VFTGVDEALKAETRATTAFVLDEI 742

Query: 459 AILLQAFVPKLANKIFDI 476
             LL  F+P L  +++  
Sbjct: 743 LKLLHPFMPFLTEELWAR 760



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           + E   I           H+GHA    + D+L RF R+ G DVL+  GTD  G       
Sbjct: 34  DAEPYCIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGKDVLWQVGTDHAGIATQMVV 93

Query: 60  -----------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +A      T K           + +    D S + F  T ++ 
Sbjct: 94  ERQLAERQLPGRREMGREAFVERVWTWKEESGGTIINQLKKLGASCDWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  ++ ++  +G IYK      +  + ++  +D EV +     +      P+
Sbjct: 152 LSRAVLKVFVRLYKEGLIYKDKRLVNWDPKFQSAISDLEVLQVEMKGHLWHFRYPL 207


>gi|86750009|ref|YP_486505.1| valyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86573037|gb|ABD07594.1| valyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 972

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 118/338 (34%), Gaps = 20/338 (5%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +    +WME    +                 P+  + +    E       G   +   
Sbjct: 426 NWEKTYYEWMENIQPWCISRQLWWGHQIPAWYGPDGRVFVAETEEEAVGNALG-YYVEQE 484

Query: 211 RKTFDWGIKIPDDP----------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
             T +    + +DP          + ++  W  +     +T G+ D       +++P ++
Sbjct: 485 VLTPEQAHDMAEDPLKREGFITRDEDVLDTWFSSALWPFSTLGWPDETP-ELDRYYPTNV 543

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            V G DI+ F    +        +++P P           KG K+SKS GNVIDP+ +I+
Sbjct: 544 LVTGFDIIFFWVARMMMMGLHFKSDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLNLID 603

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G DALR+ L    A G+D       ++     + A  + N   R   M          
Sbjct: 604 QYGADALRFTLAAMAAQGRDIKLASSRVEG--YRNFATKLWN-ACRFAEMNGCAAPKEFD 660

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
              A    +  I     R  +E+ E +++   + A       V     D Y +  KP  L
Sbjct: 661 YTAAKETLNRWIAHEAVRATREVTEAIESYRFNDAAGAAYRFVWNVYCDWYLELAKP-VL 719

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                   +    +      ++  LL  F+P +  +++
Sbjct: 720 MGEESAAKAETRAMVAWARDEILKLLHPFMPFITEELW 757



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GHA    + D+L RF R+ G DVL+  GTD  G      
Sbjct: 49  RDAEPYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMV 108

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +   +  +               V Q             + +    D S + F  T ++
Sbjct: 109 VERQLMERQEPGRREMGRAKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDE 166

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++ ++  +G IYK      +  +     +D EV +     +      P++
Sbjct: 167 GLSRAVVKVFVELHRQGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGHLWHLRYPLE 224


>gi|229109652|ref|ZP_04239238.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228673693|gb|EEL28951.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 141/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVRLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|228958483|ref|ZP_04120203.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801110|gb|EEM48007.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|228985290|ref|ZP_04145453.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774445|gb|EEM22848.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|229155782|ref|ZP_04283888.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228627768|gb|EEK84489.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|218232538|ref|YP_002366903.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218160495|gb|ACK60487.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEGYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWYILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|148554014|ref|YP_001261596.1| valyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|166225532|sp|A5V592|SYV_SPHWW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|148499204|gb|ABQ67458.1| valyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 896

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 126/371 (33%), Gaps = 51/371 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +    S    ++P        +++   ++   +SR+   W
Sbjct: 358 IEPWLTDQWYVDAETLAKPAIEAVRSGAIRVVPESWTKTYYNWLD-NIQPWCVSRQ-LWW 415

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +      T G+ D   
Sbjct: 416 GHQIPAWYDADGQVYVAEDEAAASALAGGKALTRDSDVLDTWFSSALWPFGTIGWPDQAG 475

Query: 250 G---------------SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                              + +P D+ + G DIL F    +          +P       
Sbjct: 476 QQPPEAYQAGAAGKASKLQRHYPNDVLISGFDILFFWDARMIMQGLHFMGEVPFRTLYLH 535

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                  G K+SKS GN +DP+ +I++ G DALR+ L    + G+D   D+  ++     
Sbjct: 536 GLVRAADGSKMSKSKGNTVDPLGLIDKYGADALRFTLTAMESQGRDIKLDEKRVEG--YR 593

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           + A  + N    +    +     + P P A    +  I++   R +Q +   + +     
Sbjct: 594 NFATKLWNAARFAQGNGIGASTTIEP-PAAELAVNRWIIAETVRTVQALDLAIADLRYDE 652

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +   +   V     D Y +  KP   +  +  +A+    V   V+ Q+ ++L  F+P + 
Sbjct: 653 SANTIYQFVWASFCDWYLELIKPVLAEGADQGQAAETRAVAGWVLDQILVMLHPFMPFIT 712

Query: 471 NKIFDILFVAD 481
            +++  L   D
Sbjct: 713 EELWHALGRRD 723



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 22/159 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I           HIGHA +  + DVL R  RL G D L+  GTD  G       
Sbjct: 32  EAEPYTIVIPPPNVTGSLHIGHALDDTLQDVLIRHARLKGKDALWVVGTDHAGIATQMVV 91

Query: 63  QNA---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +             T + F+ +                R +    D + + F  T ++  
Sbjct: 92  ERQLDAKGQKRTDFTREQFIAKVWEWKEESGGTITRQLRRLGASCDWANERF--TMDEGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 ++  + ++G +Y+      +    +   +D EV
Sbjct: 150 SKAVLKVFVDLYNQGLLYRDKRLVNWDPGLKTAISDLEV 188


>gi|219122368|ref|XP_002181518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406794|gb|EEC46732.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1035

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 138/420 (32%), Gaps = 41/420 (9%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----N 155
              +  + LW  +  +G + K         R +      E    +               
Sbjct: 424 DRFECRQQLWTDMETEGLVIKADPHTQRVPRSQRGGEIIEPLVSSQWFVKTEGMGAKALK 483

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV-----------KSGL 204
            V+  + +    R     +  L+                  + +V           ++  
Sbjct: 484 AVEDGDIKIVPQRFDKIWNNWLTDIHDWCVSRQLWWGHRIPVWYVGETGEDEFIVARNEK 543

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPADLH 261
           +    +         +    + ++  W  +      T G+  N         +F+PA   
Sbjct: 544 EAREKAVANGHSADVVLRQEEDVLDTWFSSGLWPFATVGWPQNEGVKGSDFDRFFPASCL 603

Query: 262 VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
             G DI+ F    +      L+   P              G K+SK+ GNV+DP++ + E
Sbjct: 604 ETGYDIIFFWVARMVMMGIELTGKSPFSVVYLHGLVRAADGSKMSKTKGNVLDPLDTVAE 663

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D+LRY LV  +  G+D   + + ++   N + AN + N         LKD       
Sbjct: 664 FGADSLRYSLVTGVTPGQDIPLNMEKIEA--NRNFANKLWNCCKFVTGNALKDLSDEDLA 721

Query: 380 ------PGAFTESD------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
                 P    E D        I+S C  ++  + ++++   +  A ++V   + +   D
Sbjct: 722 SLAVSGPIEQEEFDSLLLPERYIISKCHTLVASVTQDIEKYQLGAAGSKVYEFLWDQFAD 781

Query: 426 RYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            Y +  K    +      N + A     V V V+     LL  ++P +  +++  L  AD
Sbjct: 782 WYIEISKTRLYEGAGGGDNIEEAQAARRVLVYVLDTSLRLLHPYMPYVTEQLWHHLPRAD 841



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 66/177 (37%), Gaps = 25/177 (14%)

Query: 8   YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN- 64
           Y+      PN   + H+GHA  + + DVLARFHR+ G  VL+  GTD  G       +  
Sbjct: 147 YVLPMPP-PNVTGRLHMGHAIFVALQDVLARFHRMRGRPVLWLPGTDHAGIATQLQVEKL 205

Query: 65  --AGVTTKV---------FVDQNSRNF--------RDMADVLDISYDDFIRTTEKRHHDT 105
             A  TT+           V               R +    D S + F  T +      
Sbjct: 206 LIAEGTTREEVGRDEFLRRVWMYKEEQGGFITSQLRSLGASADWSRERF--TMDDDLSQA 263

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ +KG +Y+G Y   ++   +   +D EV    +          V+  EE
Sbjct: 264 VVEAFCRLHEKGLVYRGEYMVNWAPLLQTAVSDLEVEYSEEEGKLYYFKYMVEGSEE 320


>gi|116754239|ref|YP_843357.1| isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121692931|sp|A0B7P3|SYI_METTP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116665690|gb|ABK14717.1| Isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 1049

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 132/389 (33%), Gaps = 15/389 (3%)

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADG----QYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            +  + G   LRD+     + V    D     ++ +   N   W      ++ +      
Sbjct: 410 TRQWFIGISELRDQMLKEIERVSWYPDWAGSARFKDWISNARDWCISRQRYWGIPLPIWI 469

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
             S                            +   R     G  +   P  +  VW D+ 
Sbjct: 470 CRSCGAMDVIGTAAELEARAGRPVEDLHRPAVDDVRLRCSCGGAMERVPD-VFDVWFDSA 528

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSH 293
                T  +  + +     +WPAD    G D     F++    + +     P    +   
Sbjct: 529 VASWATLNFPRDEE-EFRVWWPADFITEGHDQTRGWFYSQLGASMVAFGRAPYKSVLMHG 587

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +  +G K+SKS+GNV+ P +V+E  G D LR++++   A  +D  +  +G        
Sbjct: 588 FTLDEQGRKMSKSIGNVVHPEDVVERYGADTLRFYVLSSNAPWEDLHFSWEG--AMNVNR 645

Query: 354 LANGIGNLVSRSV-SMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLI 410
           + N + N     +  M+L  +D              D  I+S  + + +EI ENM   ++
Sbjct: 646 MLNILWNAYRFPLPYMVLDRFDISKADTSKYDLRPEDRWIISRVNSLAKEIEENMSGYML 705

Query: 411 HRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           HRA   +   V       Y    +P    +T              V+  L  L+  F P 
Sbjct: 706 HRATRSLQEFVLEDLSRWYIQLVRPRTWIETEDPDKLAAYATLYNVMSTLVKLMAPFTPF 765

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGF 497
           LA  I+  L    +    +S+     PG+
Sbjct: 766 LAESIYQNLVRGLDPSAPESVHMCDWPGY 794



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 20/221 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + +      Y   + H+G A+  +I D + R+  + G D+    G D HG  I    + 
Sbjct: 39  RRFFFVDGPPYTTGRIHLGTAWNKVIKDSILRYMSMRGYDLKDRAGWDMHGLPIEVKVEE 98

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 K F  +      +    L +   +D+   T +  + + 
Sbjct: 99  HLGFRSKRDIESYGVDRFIEQCKSFALRQKDEMTEQFKSLGVWLDWDNPYMTLKNEYIEA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE-G 164
                K+  ++G + +G     +  R +    D EV    +         PV+  +    
Sbjct: 159 AWWTLKRAHERGLLERGLRVVNWCPRCQTAIADSEVEYWDESDPSIYVKFPVEGEDNTYI 218

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
             +  + +          H +F+    R        +  + 
Sbjct: 219 VIWTTTPWTIPANVAVAVHKDFMYSKVRAWRRDGTYEILIM 259


>gi|229096714|ref|ZP_04227685.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228686920|gb|EEL40827.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 139/360 (38%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIAELRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            +   P     E +   K  + ++ +       G  +   P+ ++ VW D+ +       
Sbjct: 478 SKKETP-----EDLELHKPYVDEVQVCCGK--CGGTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++E+ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  +       A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKKVRTALDEYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE         ++      EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWESGMN--AEKASAYETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGFKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|229102814|ref|ZP_04233510.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228680599|gb|EEL34780.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 139/360 (38%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIAELRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            +   P     E +   K  + ++ +       G  +   P+ ++ VW D+ +       
Sbjct: 478 SKKETP-----EDLELHKPYVDEVQVCCGK--CGGTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++E+ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  +       A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKKVRTALDEYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE         ++      EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWESGMN--AEKASAYETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|229115692|ref|ZP_04245097.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228667834|gb|EEL23271.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 1033

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 139/360 (38%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIAELRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            +   P     E +   K  + ++ +       G  +   P+ ++ VW D+ +       
Sbjct: 478 SKKETP-----EDLELHKPYVDEVQVCCGK--CGGTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++E+ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  +       A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKKVRTALDEYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE         ++      EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWESGMN--AEKASAYETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGFKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|189083231|sp|Q12R39|SYL_SHEDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 863

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AINNKTSPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G           PV   E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVQDG----CCWRCDTPVIQKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G+     +  S ++FD     PD    + YV I A 
Sbjct: 206 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFKVKDSEQSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 106/320 (33%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 496 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 555

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 556 VNSNEPAKRLLTQGMVLADAYYYTNDKGARVWVSPLEAEVVEKDDKGRVVKAVDSQGNEL 615

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 616 VYTGMSKMSKSKNNGIDPQTMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 673

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  V                 + S +++     + + ++ +++  +   + A+
Sbjct: 674 KRLWKLASDHV----AAGPTEALDVSKLSSSQKALRRELHKTIAKVSDDIGRRQMFNTAV 729

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P  ++    +  E +  +  LL   +P ++  ++
Sbjct: 730 AAVMELMNHLSK-------------APQDSAQDRALLAEALSAVTRLLYPIIPHMSFTLW 776

Query: 475 DILFVAD--ENRCFQSLDQR 492
             L  ++  E+  +  +D+ 
Sbjct: 777 HELGNSNNIEDSRWPDVDEA 796


>gi|298675785|ref|YP_003727535.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288773|gb|ADI74739.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 1065

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 145/397 (36%), Gaps = 66/397 (16%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E        +      P  ++    +F ++S  +  +LS          P          
Sbjct: 387 EESINHRYGHCWRCKTPNIYLATVQWFLKISDIKQNMLSEI--QKVDWYPEWAGTSRFKD 444

Query: 200 VKSGLKDLSLSRKTFDWGIKI--------------------------------------- 220
              G +D  +SR+   WGI I                                       
Sbjct: 445 WVEGARDWCISRQR-YWGIPIPVWKCSGCGSIDVVGTKQELINKSNADKHIELHRPYVDD 503

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                         + +  VW D+      T GY  +      ++WPAD    G D    
Sbjct: 504 LTMECDCGGSMSRVEDVFDVWFDSAVASWATLGYPQSEK-DFHRWWPADFITEGHDQTRG 562

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    + +     P    +     +   G+K+SKS GNV+DP+EV+++ G D LR +
Sbjct: 563 WFYSQLGASMVAFEQSPYKSVMMHGFTLDKYGKKMSKSQGNVVDPLEVVDKYGADTLRAY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGA----F 383
           ++   A   D  ++ +G+ +  +    N + N+    +  M+L ++D    +  +     
Sbjct: 623 VLSTSAPWDDLKFNWEGVNQVYSN--LNILWNVYRFPIPYMVLDNFDPKQVSMDSISKHL 680

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWE-LKKTN 440
            + D+ ILS    V++++   M +  +H+A+  +   V       Y    +P   ++  +
Sbjct: 681 RKEDKWILSRMQSVIKDVDYAMSDYQLHKAIRAINEFVLEDLSRWYIQLIRPRTWVESED 740

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PD+ +    V  +V   L+ L+  F P +A +++  L
Sbjct: 741 PDKLAA-YRVLYDVFVTLSKLIAPFTPHIAEEMYQNL 776



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 19/157 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
           K +      Y     H+G A+  +I D + R+  ++  D+    G D HG  I    +  
Sbjct: 40  KFFFVDGPPYTTGHIHLGTAWNKVIKDSILRYFSMNNYDIHERAGWDMHGLPIEVKVEGI 99

Query: 64  ---------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                          N     K F  +   N  +    L +   +++   T    + +  
Sbjct: 100 LGFQSKKDIETYGVGNFINKCKNFAIEQKDNMTEQFKSLGVWLDWENPYMTLRDEYIEAA 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+  DK  + +G     +  R E    D EV  
Sbjct: 160 WWTLKQAYDKDLLEEGQRVVNWCPRCETAIADSEVDY 196


>gi|91772253|ref|YP_564945.1| isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684526|sp|Q12ZD1|SYI_METBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91711268|gb|ABE51195.1| Isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 1058

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 146/397 (36%), Gaps = 66/397 (16%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E        +       + ++  E +F ++   ++ +L           P    +     
Sbjct: 387 ERMISHRYGHCWRCKTAIIYLATEQWFLKIGELKEDMLEEI--KKVNWTPEWAGSARFKD 444

Query: 200 VKSGLKDLSLSRKTFDWGIKIPD------------------------DP----------- 224
              G +D  +SR+   WGI IP                         DP           
Sbjct: 445 WIEGARDWCISRQR-YWGIPIPVWKCSSCNSLTVVGTRKELIERSGADPHIELHRPYVDK 503

Query: 225 --------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                         + +  VW D+      T  +    +    ++WPAD    G D    
Sbjct: 504 VTIPCECGGTMKRVEDVFDVWFDSAVASWATLRFPHQKE-KFNEWWPADFITEGHDQTRG 562

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    + +     P    +     +   G+K+SKS+GNVI P EVI++ G D LR +
Sbjct: 563 WFYSQLGASMVAFGKAPYKNVLMHGFTLDGSGKKMSKSIGNVIQPAEVIDKFGADTLRSY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTE-- 385
           ++   A  +D  ++ D L      +  N + N+    +  M L D+D    +  +     
Sbjct: 623 VLSASAPWEDLKFNWDELATVHRTN--NILWNVYRFPLPYMALDDFDPQKVSYESVEAYL 680

Query: 386 --SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWE-LKKTN 440
              D+ ILS    V+ E+ + M  +L+H+A+  +   V       Y    +P   ++  N
Sbjct: 681 RSEDKWILSRMQTVIAEVNKAMDARLLHKAMRSINEFVLEDLSRWYIQLIRPRTWVEADN 740

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           PD+ + V  V  +V    A L+  F+P LA +++  L
Sbjct: 741 PDKLA-VYRVLYDVFVTTAKLIAPFMPHLAEEMYQNL 776



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K Y      Y     H+G A+  II D + R+  ++  D+L   G D HG  I   
Sbjct: 36  KGAKKFYFVDGPPYTTGHIHLGTAWNKIIKDSILRYMSMNDHDILDRAGWDMHGLPIEVK 95

Query: 62  AQ-----------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                 N     K F  +   +  +    L +   ++D   T +  +
Sbjct: 96  VEGALGFESKKDIETYGVGNFIEKCKEFALRQKDDMTEQFQTLGVWLDWEDPYMTLKDEY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      K+  DK  +  G     +  R E    D EV  
Sbjct: 156 IEAAWWTLKQAQDKNLLETGKRVVNWCPRCETAIADAEVEY 196


>gi|291287646|ref|YP_003504462.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884806|gb|ADD68506.1| valyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 874

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 80/384 (20%), Positives = 138/384 (35%), Gaps = 45/384 (11%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V       +       ++    + +F ++    D+ +   E+    ILP        +++
Sbjct: 338 VDHKHQVGHCYRCKTIIEPKLSDQWFIKIKPMADEAVKAVETGQIKILPETWHKTYYNWM 397

Query: 201 KSGLKDLSLSRKTFD---------------------------WGIKIPDDPQYIMYVWID 233
              ++D  +SR+ +                             G K       ++  W  
Sbjct: 398 NE-IRDWCISRQIWWGHRIPAWYCDDCGEIVVEMEDPTECTKCGSKNLRQETDVLDTWFS 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +  +  K KF+P    + G DIL F    +          +   K+V+
Sbjct: 457 SGLWPFSTQGWPEETETLK-KFYPTSCLITGFDILFFWVARMMMFGLKFRDGVEPFKEVY 515

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            H  I  K G K+SKS GNVIDP+ +I++ G DA R+ L    A G+D   D+  +    
Sbjct: 516 LHALIRDKDGHKMSKSKGNVIDPLTMIDKYGADAFRFTLAAFAAQGRDIKLDEARI---- 571

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQL 409
             D      N +  +   IL  Y+G            D+ IL       Q+I +  +N  
Sbjct: 572 --DGYRNFVNKIWNASRFILSGYNGQKLESFNNLEIEDKWILQNLKEAEQKISKATRNYD 629

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A   +         D Y +  KP      + +R    L V   V+ +  ILL  F+P
Sbjct: 630 FNEAAGSIYQFFWHKFCDWYIELIKPRIY---DDERKEKALAVASYVLEKSLILLHPFMP 686

Query: 468 KLANKIFDILFVADENRCFQSLDQ 491
            L   I+  L    E+      + 
Sbjct: 687 FLTEYIY-RLVTEKESIMLAEWET 709



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D++ RFH+L+G + ++  G D  G      
Sbjct: 34  SDKPPYSIVIPPPNVTGSLHMGHALNNTLQDIMIRFHKLNGYETMWMPGMDHAGIATQNV 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +    +                   + +++     +    L  S  +D    T ++   
Sbjct: 94  VERLLASEGKSRHELGREEFIERVWEWKEESGGKIINQLKRLGCSCDWDRERFTMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYK 143
              R ++  +  +G IY+   Y   +  R     +D EV  
Sbjct: 154 KAVRKVFVTLYKEGLIYRSKNYLVNWCPRCHTALSDLEVEH 194


>gi|87123441|ref|ZP_01079292.1| valyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86169161|gb|EAQ70417.1| valyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 914

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 142/411 (34%), Gaps = 65/411 (15%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 Y +    PV+ +    +F +      +            +P  R  +V     +
Sbjct: 338 HRHSVPYSDRGKVPVEPLLSTQWFVKTEPLAARCREALAQQAPRFIPE-RWEKVYRDWLT 396

Query: 203 GLKDLSLSRKTFDWGIKIP----------------------------------------- 221
            ++D  +SR+   WG +IP                                         
Sbjct: 397 DIRDWCISRQ-LWWGHRIPAWFVISETGGNYTDTTPYVVARNDAEALEKAKAEFGPAAQI 455

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           +  + ++  W  +     +T G+ +       +++P    V G DI+ F    +   A  
Sbjct: 456 EQDEDVLDTWFSSGLWPFSTLGWPETGSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGA 515

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKD 338
            +  +P             +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D
Sbjct: 516 FTGEMPFKDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQD 575

Query: 339 GFYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESIL 391
              D D         + A    N +  +    L +  G  P       P A   +D  IL
Sbjct: 576 IRLDYDRKTDTSATVEAARNFANKLWNATRFALMNLGGETPASLGEPEPAALQLADRWIL 635

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRA 444
           S  +RV +E  E   +  +  A   +         D Y +  K        P        
Sbjct: 636 SRLARVNRETAERYSSYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGEAPSPEALADQ 695

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLD 490
            T   V V+VI Q+ ++L   +P L  +++  +  A E      + + +LD
Sbjct: 696 RTARQVLVKVISQMHLMLHPLMPHLTEELWHSVTGAGETTFLALQPWPALD 746



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 36  DPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGRNVLCLPGTDHASIAVQTLLEK 95

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  +  ++     D    L  S D     F  T ++   +
Sbjct: 96  QLKEEGKTRHDLGREAFLERAWQWKAESGGRIVDQLRRLGYSVDWQRQRF--TLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|229029917|ref|ZP_04185986.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228731425|gb|EEL82338.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 1033

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 142/360 (39%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIADLRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P     E +   K  + ++ +  +    G  +   P+ ++ VW D+ +       
Sbjct: 478 STKETP-----EDLELHKPYVDEVQVCCEK--CGSTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++ + G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+        +T+ DE +LS      +++R  +       A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDVKWTKLDEWVLSRLHSTTKKVRTALDEYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|222095809|ref|YP_002529866.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221239867|gb|ACM12577.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 1033

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 141/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMSGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|153001820|ref|YP_001367501.1| leucyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151366438|gb|ABS09438.1| leucyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 874

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 46  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 106 INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 166 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 221

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 222 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 279



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 110/320 (34%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 507 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 566

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 567 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 626

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 627 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 684

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 685 KRLWKLANEHVNQA----NSEALDVSTLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 740

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 741 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALSAIVRLLYPIIPHVSFNLW 787

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 788 NELGNASNIEDSQWPVVDEA 807


>gi|85706318|ref|ZP_01037412.1| valyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85669091|gb|EAQ23958.1| valyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 1033

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 11/264 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ ++    K +++P  + + G DI+ F    +   
Sbjct: 597 PVWRDPD-VLDTWFSSGLWPIGTLGWPEDTAELK-RYFPTSVLITGFDIIFFWVARMMMM 654

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + +    P             KG+K+SKSLGNV+DP+++I + G DA+R+ L    A G
Sbjct: 655 QYAVVGQKPFSHVYVHALVRDEKGKKMSKSLGNVLDPLDLIADYGTDAVRFTLTSMAAMG 714

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D    K+ +      +    + N    +         GM+PTP A    ++ I+   ++
Sbjct: 715 RDLKLSKERIAG--YRNFTTKLWNAARFAEMNGAVGSTGMVPTPTAT--VNKWIIGETAK 770

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
               + E ++N   + A   + + V     D Y +  KP  L      +A T       V
Sbjct: 771 TRATVDEALENFRFNDAAGALYAFVWGTVCDWYVEFSKPLLLDGDAATKAET-QATMAWV 829

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           I Q  ILL    P +  +++  L 
Sbjct: 830 IDQGLILLHPITPFITEELWGTLG 853



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 58/190 (30%), Gaps = 29/190 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 43  ETFSIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGHDTLWQPGQDHAGIATQMVVER 102

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK--- 100
                               KV+  +           + +    D S + F  +      
Sbjct: 103 KLAAEGAPSRREMGREAFLEKVWEWKTQSGDTIINQLKRLGASCDWSRNAFTMSGAPGAP 162

Query: 101 -----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  +  KG IY+G     +    E   +D EV       +      
Sbjct: 163 AGEEGNFHDAVIKVFVDMHAKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 222

Query: 156 PVQWMEEEGY 165
           P+   E   Y
Sbjct: 223 PLAGGETYDY 232


>gi|320355122|ref|YP_004196461.1| valyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123624|gb|ADW19170.1| valyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 894

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 150/401 (37%), Gaps = 52/401 (12%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++ + +  E Y+ A G+ Y      V+    + +F  +    DK ++  +     + P 
Sbjct: 337 QEQGFLDKIEDYQHAVGKCYR-CSTVVEPTTSKQWFVSVRPLADKAVAAVQEGRIKLYPN 395

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
                  ++++  ++D  +SR+   WG +IP                             
Sbjct: 396 TWYRTFYAWME-NIRDWCISRQ-IWWGHRIPAWTCEGCGQLVVEVSAPDACPFCGSTTLH 453

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
               ++  W  +     +T G+ +N     A F+P  + +   DIL F    W A ++  
Sbjct: 454 QENDVLDTWFSSALWPFSTLGWPENTK-ELATFYPTSVLITSFDILFF----WVARMMMM 508

Query: 283 NLPLPKKVFSHGFILHK------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L    +V  H   LH       G+K+SKS GNVIDP+ +I + G DA R+ L    A G
Sbjct: 509 GLHFMDEVPFHDVYLHALVRDKFGKKMSKSTGNVIDPLVMIGQYGTDAFRFTLTAFAAQG 568

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESILS 392
           ++   D++ +         N + N  +R   M LK+ D  I      P     +   ILS
Sbjct: 569 REIRMDEERIDG--YRRFINKLWN-AARFAQMHLKEADPAITALAADPEKLALAHRWILS 625

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  + E+R  +     +   +     V     D Y +  K  +L   +         V
Sbjct: 626 RINGTIAEVRAALDGYNFNEVASASYQFVWHEFCDWYLEWIKA-DLFSDDATARDQAKAV 684

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            + V+ Q+  L+    P +  +I+  L         +   +
Sbjct: 685 LLTVLEQVLKLMHPICPFVTEEIWSQLPGERRTIMLEPFPE 725



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 18/162 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    I           HIGHA    + D+L R+HR+ G + L+  GTD  G      
Sbjct: 43  EGRPSFSIVIPPPNVTGVLHIGHALNNTLQDLLVRYHRMKGDNTLWVPGTDHAGIATQNV 102

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +    + +                 + ++      +    +  S  +D    T ++   
Sbjct: 103 VERQLASEQLSRHDLGRERFIERVWAWKEEKGGTIINQLKRMGASCDWDRERFTMDEGLS 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
              R ++ ++  +G IYKG Y   +  R      DDEV    
Sbjct: 163 KAVREVFVRLYKEGLIYKGDYIVNWCPRCHTALADDEVEHDP 204


>gi|149184145|ref|ZP_01862472.1| methionine--tRNA ligase [Bacillus sp. SG-1]
 gi|148848146|gb|EDL62469.1| methionine--tRNA ligase [Bacillus sp. SG-1]
          Length = 299

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 5/160 (3%)

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N +GNL++R+V+MI K +DG IP   G+    D+ +LSV    + +  E M+      AL
Sbjct: 1   NDLGNLLNRTVAMINKYFDGEIPMYKGSEGPFDKELLSVNKATVAQYEEAMEKMEFSVAL 60

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + +  L+S  ++Y D  +PW L K    D    V+    E +R+ A++LQ F+ +   KI
Sbjct: 61  SSLWQLISRTNKYIDETQPWVLAKEEKKDELGNVMVHLAETLRRAAVMLQPFLTRTPKKI 120

Query: 474 FDILFVA-DENRCFQSLDQR--LKPGFMLHKTFDPIFPRF 510
           F  L V  +E   ++SL++   +  G  + K  +PIFPR 
Sbjct: 121 FQQLNVDQEELTTWESLEEFGMIPAGTQVVKKGEPIFPRL 160


>gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 757

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 153/423 (36%), Gaps = 36/423 (8%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
                   D ++   +     +     +  E +    G         V+    + +F ++
Sbjct: 306 MCHKYAGMDRFECREALVEDFKKAGVVDHIEEHMHQVGHSERTGV-IVEPYLSKQWFVKM 364

Query: 170 SAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-------- 220
               +++L   +   +       R  +        ++D  +SR+   WG +I        
Sbjct: 365 KPLAEEVLRNQKIEDQKIHFVPSRFEKTFEQWLENIEDWCISRQ-LWWGHRIPAWTNKET 423

Query: 221 ---------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                              + ++  W  +     +T G+ ++ D   A+++P D+ V G 
Sbjct: 424 GEMYIGMEDPKDKENWIQDEDVLDTWFSSALWPFSTLGWPESTD-DLARYFPNDVLVTGY 482

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+ F    + +       N P    +        +G K+SKSLGN IDP++VIE  G D
Sbjct: 483 DIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVRDSQGRKMSKSLGNGIDPMDVIENHGAD 542

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+FL      G D  +D+  ++   N    N I N  +R V M + D    +      
Sbjct: 543 ALRFFLTTNSTPGLDLRFDEKKMESSWN--FINKIWN-AARYVQMQIGDTKPTL-DVDCL 598

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           +  D+ ILS    VL  +  NM+         ++ S +       Y +  K   L   + 
Sbjct: 599 SSVDKWILSRMDEVLNHVSMNMEKYEFAMIGNELYSFIWNDFCSWYIELSKA-TLYSEDQ 657

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                   V   V+  +  +L  F+P +  +I+  L    E+   ++   ++   +   +
Sbjct: 658 AVVQNTKAVLYTVLEAILKMLSPFMPFVTEEIYLDLPHDKESMNLETWPGKVNFTYTNEE 717

Query: 502 TFD 504
             +
Sbjct: 718 KDE 720



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 19/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA++  + D+L R+ RL G DVL+ +G D  G       
Sbjct: 34  TKKPYCIVIPPPNVTGKLHLGHAWDTTLQDILCRYKRLKGYDVLWVSGMDHAGIATQAKV 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                                    + ++ +   R     L +S D      T ++    
Sbjct: 94  DERLKNEGISRYDIGREKFLDRAWEWKEEYASTIRSQWAKLGLSLDYTRERFTLDEGLSK 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEE 162
             R ++  + + G IY+G     +    +   ++ EV +K   G  Y  ++  V+  +E
Sbjct: 154 AVRKVFVDLYNDGLIYQGERIINWDPEAKTALSNIEVEHKEILGHMYYFKYKVVENGQE 212


>gi|206975087|ref|ZP_03236001.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217959724|ref|YP_002338276.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229138915|ref|ZP_04267494.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|206746508|gb|EDZ57901.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067167|gb|ACJ81417.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228644540|gb|EEL00793.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 1033

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 139/389 (35%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K +     H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIVDLRKHSMKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|116074155|ref|ZP_01471417.1| valyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069460|gb|EAU75212.1| valyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 914

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 84/400 (21%), Positives = 142/400 (35%), Gaps = 67/400 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E      +P  R  +V     + ++D  +SR+   
Sbjct: 351 PVEPLLSTQWFVKTEPLAARCREALEKQDPRFIPE-RWEKVYRDWLTDIRDWCISRQ-LW 408

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 409 WGHRIPAWFVISETGGKYTDTTPYVVARNEAEALEKAKAEYGAGAEIEQDEDVLDTWFSS 468

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    V G DI+ F    +   A   +  +P       
Sbjct: 469 GLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 528

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK--- 348
                 +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D  K    
Sbjct: 529 GLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKKDTSA 588

Query: 349 --RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  +R   M L          P P A   +D  ILS  +RV +E  E
Sbjct: 589 TVEASRNFANKLWN-ATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLARVNRETAE 647

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIR 456
              +  +  A   +         D Y +  K       NP             V  +VI 
Sbjct: 648 RYSSYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVAKQVLAKVIS 707

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQ 491
           Q+ ++L   +P L  +++  +    E      + +  LD+
Sbjct: 708 QMHLMLHPLMPHLTEELWHSVTGEPETTFLALQPWPELDE 747



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 36  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTILEK 95

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  +  ++          L  S D     F  T ++   +
Sbjct: 96  QLKEEGKTRHDLGREAFLERAWQWKAESGGRIVGQLRRLGYSVDWKRQRF--TLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|228907943|ref|ZP_04071794.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228851702|gb|EEM96505.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 1033

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 142/360 (39%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 IWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESCDN---QFAPKSIAELRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P     E +   K  + ++ +       G  +   P+ ++ VW D+ +       
Sbjct: 478 STKETP-----EDLELHKPYVDEVQVCCGK--CGSTMDRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++++ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|307103633|gb|EFN51891.1| hypothetical protein CHLNCDRAFT_56341 [Chlorella variabilis]
          Length = 905

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 131/402 (32%), Gaps = 64/402 (15%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           +  + D E                V+ +  E +F R+       L    S    ILP  R
Sbjct: 319 KQLWADMEQQGLMRVPRSQRGGEIVEPLVREQWFVRMEPLAKPALEAVASGAIRILPD-R 377

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------- 221
             +V +F    +KD  +SR+   WG +IP                               
Sbjct: 378 FEKVYNFWLDNIKDWCISRQ-LWWGHRIPVWYVFDDEAAAAAAASSERYVVAKSEGEARD 436

Query: 222 ------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                            ++  W  +     +T G+ +       +++P  +   G DIL 
Sbjct: 437 RAVQQYGPDVVLKQESDVLDTWFSSGLWPFSTLGWPNATP-DLERYYPTAVMETGHDILF 495

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +       +   P             KG K+SKSLGNV+DP+E I++ G DALR+
Sbjct: 496 FWVARMIMMGLECTGRPPFHTVYLHGLVRDEKGRKMSKSLGNVVDPVETIQQYGADALRF 555

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----- 382
            L    + G+D     D +    N    N + N     +  + +  D             
Sbjct: 556 TLATGTSPGQDLNLSLDRVNASRN--FTNKLWNAGKFVLFNLGEADDAEWQRLATADLSS 613

Query: 383 ------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPW 434
                     +  ++S   R +++I    +      A   +   V     D Y +A K  
Sbjct: 614 SAATAGLALPERWVVSALHRAVRDITAAHERFDFGEAGRLLYDFVWSDFADWYIEAAKA- 672

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            L   +   A+    V V V  ++  L   F+P +  +++  
Sbjct: 673 RLYGEDAAAAAQTRAVLVYVYDKVLKLAHPFMPFITEEMWQA 714



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 24/180 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHA--YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E   IS        + H+GHA    +  +D++ R+ R+ G   L+  GTD  G       
Sbjct: 33  EPYVISMPPPNVTGKLHMGHAMFVTLQASDIMTRYQRMRGRPTLWLPGTDHAGIATQMVV 92

Query: 63  QN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    +V+  +       ++  R +    D S + F  T ++  
Sbjct: 93  EKQLAAEGRDRRSLGREAFEAEVWAWKAQYGGFITQQLRRLGASCDWSRERF--TLDEGL 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +     + ++ DKG +Y+G Y   +S   +   +D EV    +         PV   EE
Sbjct: 151 SEAVLEAFVRLHDKGLVYRGSYMVNWSPGLQTAVSDLEVEYSEEAGTLYYFKYPVADSEE 210


>gi|194476850|ref|YP_002049029.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora]
 gi|171191857|gb|ACB42819.1| t-RNA synthetase, class Ia:Valyl-tRNA [Paulinella chromatophora]
          Length = 916

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 18/320 (5%)

Query: 173 QDKLLSYYESHPEFILPIERRNEV--ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           Q                  + NE       ++ ++ L  +R+ +   I I  D   ++  
Sbjct: 416 QLWWGHQIPVWFVISETNSQLNEHTPYIVARTSVEALEQARECYGDKIVINQDED-VLDT 474

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ D+       ++P    V G DI+ F    +   A   +  +P  +
Sbjct: 475 WFSSGLWPFSTLGWPDSNSADFQCWYPNSTLVTGFDIIFFWVARMTMMASSFTKKMPFKE 534

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG-- 345
                        K+SKS+GN IDP+ +I+  G DALR+ LV E+A  G+D   D +   
Sbjct: 535 VYIHGLVRDENNCKMSKSMGNGIDPLVLIDRYGADALRFALVWEVAGAGQDIRLDYNRNE 594

Query: 346 ---LKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQ 399
              LK   + + AN I N   R   M L D +      P P     SD  ILS  ++V  
Sbjct: 595 NTSLKVESSRNFANKIWN-ACRFTLMNLNDQNTNNLGTPDPRQLKLSDRWILSRLAQVNI 653

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+ E   +  +  A   +         D + +  K   +   +     T   V + V+ Q
Sbjct: 654 EMSEYYSSYNLGEAAKAIYEFTWNDLCDWFIELAK-RRINSDDYTLRQTTFQVLMIVLEQ 712

Query: 458 LAILLQAFVPKLANKIFDIL 477
           + ++L   +P +  +++  L
Sbjct: 713 ILVMLHPLMPHITEELWHGL 732



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI----AK 60
           E   +           H+GHA+   + D + RF RL G + L   GTD     +     +
Sbjct: 46  EPFSVVIPPPNVTGSLHMGHAFNSALIDTIVRFQRLLGKNTLCLPGTDHASIAVQTILER 105

Query: 61  AAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
             +  G + +    +                     R +    D   + F  T +K  +D
Sbjct: 106 QLKEQGKSKEDLGRKGFLDLAWRWKVQSGGIIVNQMRRLGYSADWQRERF--TLDKGLND 163

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  + ++G IY+G Y   +     +  +D EV              P+
Sbjct: 164 AVIEAFVLLHEQGLIYRGEYLVNWCPASNSAVSDLEVETRDVKGSLWYFRYPL 216


>gi|188997245|ref|YP_001931496.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932312|gb|ACD66942.1| valyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 977

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 137/350 (39%), Gaps = 21/350 (6%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           + +  DD +    D  + + +   +++ E+  +  + S ++ K  S  +         + 
Sbjct: 459 QIFCVDDVLNILKDKNFTHPEKTNLEFYEKIVFGEKTSQFESKD-SLIKLLENSNKFEKV 517

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
            NE                     G +     + ++  W  +      T G+    D   
Sbjct: 518 YNERYKIKLK----------CEKCGSENLHQEEDVLDTWFSSALWPFGTLGWPSRKD-DL 566

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
             F+P  L V G DI+ F    +       + ++P             KGEK+SK+ GNV
Sbjct: 567 ETFYPTSLLVTGFDIIFFWVARMIMMGTKFTNDVPFKDVYIHALVRDEKGEKMSKTKGNV 626

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP+E+ E+ G DALR+ L    A G+D    +  ++       +N I N  S+ V +  
Sbjct: 627 IDPLEMAEKYGSDALRFTLASLAAQGRDIRLSEKRIEG--YKHFSNKIWN-ASKFVLINS 683

Query: 371 KDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +DYDG       + +  D  IL+  ++ ++   + ++N   +     +         D Y
Sbjct: 684 EDYDGKTNLESLSLSIEDYWILTKLNKTIESSTKELENYRYNEYANILYDFFWHDYCDWY 743

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  K   + K + +   T L V   V+R+   LL   +P +  +I+  L
Sbjct: 744 IELSK-ERIYKGSSEEKKTALTVLNFVLRESLKLLHPIMPYITEEIYSYL 792



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 22/176 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    +           HIGHA  + + D++ R+ R+ G +VL+  G D  G       
Sbjct: 30  KKPYFSVVMPPPNVTGSLHIGHALNVTLQDIMVRYKRMQGYNVLWLPGFDHAGIATQWVV 89

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRH 102
                                    +V ++  + ++    +  S D     F  T ++  
Sbjct: 90  VRELQKEGISRFDLGRERFIEKVWQWVPKSRDSIKNQLIRIGASCDWSRQRF--TLDEGF 147

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               R  +  +  +G I+K  Y   +  +++   +D EV              P++
Sbjct: 148 SRAVRYAFVNLYKEGLIFKAPYIVNWDPKEKTAISDLEVEYQEHKGKIWHIKYPLE 203


>gi|229172908|ref|ZP_04300462.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228610653|gb|EEK67921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 1033

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 142/360 (39%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIADLREH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P     E +   K  + ++ +  +    G  +   P+ ++ VW D+ +       
Sbjct: 478 STKETP-----EDLELHKPYVDEVQVCCEK--CGSTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++ + G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVNQFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDAKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|75760445|ref|ZP_00740486.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74492070|gb|EAO55245.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 1033

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAKLRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|228900803|ref|ZP_04065018.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|228858729|gb|EEN03174.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 1033

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAKLRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|196045992|ref|ZP_03113220.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023047|gb|EDX61726.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 1033

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMTRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +   P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKAPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLINVYSFYVLYANLDEYNPHETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHVNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|229074897|ref|ZP_04207906.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228708234|gb|EEL60398.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 1033

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 139/360 (38%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIAELRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            +   P     E +   K  + ++ +       G  +   P+ ++ VW D+ +       
Sbjct: 478 SKKETP-----EDLELHKPYVDEVQVCCGK--CGGTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++E+ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  +       A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKETYDVKLTKLDEWVLSRLHSTTKKVRTALDEYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE         ++      EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWESGMN--AEKASAYETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDVVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|113954820|ref|YP_732013.1| valyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113882171|gb|ABI47129.1| valyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 914

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 143/401 (35%), Gaps = 67/401 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +            +P  R  +V     + ++D  +SR+   
Sbjct: 351 PVEPLLSTQWFIKTEPLAARCREALAQQDPRFIPE-RWEKVYRDWLTDIRDWCISRQ-LW 408

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 409 WGHRIPAWFVISETGGKYTDTTPYVVARDEAEALAKAQEQFGAEARIEQDEDVLDTWFSS 468

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    + G DI+ F    +   A   +  +P       
Sbjct: 469 GLWPFSTLGWPDANAADLQRWYPTSTLITGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 528

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK--- 348
                 +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D  K    
Sbjct: 529 GLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKKDTSA 588

Query: 349 --RVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  +R   M L      +   P   A   +D  ILS  +RV QE   
Sbjct: 589 TVEASRNFANKLWN-ATRFALMNLGGATPAELGEPEVSALRLADRWILSRLARVNQETAG 647

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIR 456
              +  +  A   +         D Y +  K        P  A+     T   V  +VI 
Sbjct: 648 RYSSYALGEAAKGLYEFAWNDVCDWYLELSKRRLNPGEEPSAAALADQHTAKQVLAKVIS 707

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQR 492
           Q+ ++L   +P L  +++  +    E      + + S+D+ 
Sbjct: 708 QMHLMLHPLMPHLTEELWHSVTAEPEITFLALQPWPSIDEG 748



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 23/173 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    
Sbjct: 34  EGEPFAVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTIL 93

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRH 102
           +                        +  ++     D    L  S D     F  T ++  
Sbjct: 94  EKQLKEEGKTRHDLGREAFLERAWQWKAESGGRIVDQLRRLGYSVDWQRQRF--TLDEGL 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
            +  +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 152 SEAVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|116071913|ref|ZP_01469181.1| valyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065536|gb|EAU71294.1| valyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 914

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 85/400 (21%), Positives = 142/400 (35%), Gaps = 67/400 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +            LP  R  +V     + ++D  +SR+   
Sbjct: 351 PVEPLLSTQWFVKTEPLAARCREALAQQDPRFLPD-RWEKVYRDWLTDIRDWCISRQ-LW 408

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 409 WGHRIPAWFVISETDGKYTDTTPYVVARDEAEALEKAKAEYGAAAQIEQDEDVLDTWFSS 468

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    V G DI+ F    +   A   +  +P       
Sbjct: 469 GLWPFSTLGWPDADAPDLNRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 528

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK--- 348
                 +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D  K    
Sbjct: 529 GLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKKDTSA 588

Query: 349 --RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  +R   M L          P   A   +D  ILS  +RV +E  +
Sbjct: 589 TVEASRNFANKLWN-ATRFALMNLGGETPAQLGEPDSAALQLADRWILSRLARVNRETAD 647

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-----TVLYVTVEVIR 456
              N  +  A   +         D Y +  K       NP  A+         V  +VI 
Sbjct: 648 RYSNYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAAALADQRVAKQVLAKVIS 707

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQ 491
           Q+ ++L   +P L  +++  +    E      + +  LD+
Sbjct: 708 QMHLMLHPLMPHLTEELWHSVTGEPETTFLALQPWPVLDE 747



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 19/171 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           E E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    
Sbjct: 34  EGEPFAVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQSIL 93

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADV--------------LDISYDDFIRTTEKRHHD 104
            K  +  G T      +                           + +     T ++   +
Sbjct: 94  EKQLKEEGKTRHDLGREAFLERAWQWKAESGGRIVGQLRRLGYSVDWKRQRFTLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|160876553|ref|YP_001555869.1| leucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160862075|gb|ABX50609.1| leucyl-tRNA synthetase [Shewanella baltica OS195]
          Length = 874

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 46  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 106 INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 166 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 221

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 222 DTLDGWPDQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 279



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 507 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 566

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 567 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 626

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 627 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 684

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 685 KRLWKLANEHVNQD----NSEALDASKLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 740

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P        +  E +  +  LL   +P ++  ++
Sbjct: 741 AAVMELMNHLQK-------------APQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLW 787

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 788 NELGNASNIEDSQWPVVDEA 807


>gi|228955959|ref|ZP_04117895.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228803739|gb|EEM50422.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 1033

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    +     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKYSTKETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T    + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLRNPYIESVWNILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|319427333|gb|ADV55407.1| leucyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 859

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   KTFD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGHDKTFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  ++      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASEYIAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALSAVVRLLYPIIPHVSFTLW 772

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    + E+  +  +D+
Sbjct: 773 NDLGNTGSIEDSQWPVVDE 791


>gi|34395208|dbj|BAC83606.1| putative valyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 945

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 131/373 (35%), Gaps = 40/373 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  ++  E     +S  + L+ +++ 
Sbjct: 418 PERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARSAEEALAKAQEK 477

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           +   ++I  DP  ++  W  +     +T G+ D        F+PA +   G DIL F   
Sbjct: 478 YGKSVEIYQDPD-VLDTWFSSALWPFSTLGWPDLSSEDFKHFYPATVLETGHDILFF--- 533

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH-----------KGEKISKSLGNVIDPIEVIEEVGV 322
            W A ++   +     V      LH           +G K+SK+LGNVIDP++ I+E G 
Sbjct: 534 -WVARMVMMGIEFTGTVPFSYVYLHGLIRDSEQVNFQGRKMSKTLGNVIDPLDTIKEYGT 592

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DALR+ L      G+D     + L    N    N + N     +  +    D        
Sbjct: 593 DALRFTL-SMGTAGQDLNLSTERLTS--NKAFTNKLWNAGKFLLQNLPDRSDATAWDVLL 649

Query: 383 FTESD------------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
             + D              +++    ++  +  +        A  ++         D Y 
Sbjct: 650 ANKFDTEASLQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREIYDFFWGDFADWYI 709

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +A K       +   +S    V + V   +  LL  F+P +  +++  L    +      
Sbjct: 710 EASKTRLYHSGDDSASSMAQSVLLYVFENILKLLHPFMPFVTEELWQALPYRKQAIIVAH 769

Query: 489 LDQRLKPGFMLHK 501
                 P   L K
Sbjct: 770 W-----PATDLPK 777



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 20/110 (18%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D++ R+ R+ G   L+  GTD  G       + 
Sbjct: 85  DPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYFRMKGRPALWLPGTDHAGIATQLVVEK 144

Query: 65  ---------AGVTTKVFVDQNSR-----------NFRDMADVLDISYDDF 94
                      +T + F  +                + +    D S + F
Sbjct: 145 MLAAEGIKRTDLTREEFTKRVWEWKEKYGSTITNQIKRLGASCDWSRERF 194


>gi|295838904|ref|ZP_06825837.1| valine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695457|gb|EDY42390.1| valine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 873

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 129/376 (34%), Gaps = 38/376 (10%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            D     +   Y  + G   +     V+      ++ ++    +            I P 
Sbjct: 336 EDGRIVAEKRPYVHSVGH-CSRCATAVEPRLSMQWWVKVGPLAEAASGAVRDGRVKIHPQ 394

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
           E   +        L D  +SR+   WG  I +   P+                       
Sbjct: 395 E-MEKRYFDWVDNLHDWCISRQ-LWWGHRIPVWYGPEGQTVCVGPGEEPPAGEGWHQETD 452

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA---FLLSAN 283
           ++  W  +     +T G+ +  + S AKF+P    V G DIL F  +       + +   
Sbjct: 453 VLDTWFSSALWPFSTLGWPERTE-SVAKFYPNSTLVTGYDILFFWVVRMMMFGLYAMDGT 511

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  + V         G+K+SKS GN +DP++ +++ G DALR+ L R    G D    +
Sbjct: 512 PPFSEIVLHGMVRDQNGKKMSKSFGNAVDPLDWMDKYGSDALRFTLARGANPGVDVPIGE 571

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + ++   N    N + N  +R   M     +G +P     + +D  ILS    V  +   
Sbjct: 572 EWVQGSRN--FTNKLWN-ATRFALMNGATVEGGLPPAERLSATDRWILSRLGEVTAQADA 628

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              +    +    +     +   D Y +  K        P  A     V  EV+     L
Sbjct: 629 LYDDYQFAKLSDLLFHFAWDEVFDWYVELSKSVFQAGGQP--AEDARRVLGEVLDVTLRL 686

Query: 462 LQAFVPKLANKIFDIL 477
           L   VP +   ++  L
Sbjct: 687 LHPIVPFVTETLWTTL 702



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SEKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGHETLWQPGMDHAGIATQNK 103

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + F  +     R + D +D S + F  T ++ 
Sbjct: 104 VEQQLAGEGKSRHDLGREAFIARVWQWKEEFGGKILGQMRRLGDGVDWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 162 LSQAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 206


>gi|327191807|gb|EGE58807.1| valyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 947

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 133/358 (37%), Gaps = 29/358 (8%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +     +   + +      +     H    W   +G  F     ++ L +  + +     
Sbjct: 425 NWETTYFNWLENIEPWCISRQLWWGHQIPAWYGPDGQVFVERTEEEALQAAIQHYLSHEG 484

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           P++   E +              + F  G  +  D   ++  W  +     +T G+ D  
Sbjct: 485 PMKAYVEDLL-------------ENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPDET 530

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHK-G 300
               A+++P ++ V G DI+ F  +      L          +     V+ H  +  K G
Sbjct: 531 P-ELARYYPTNVLVTGFDIIPFWVVRMMQMGLHFMKDDNGDPVEPFHTVYIHALVRDKNG 589

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +      +    + N
Sbjct: 590 QKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN 647

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R   M     D       A    +  IL+  +R  +++ E ++    + A   +   
Sbjct: 648 -ATRFAEMNGAKSDPHFVPEAAELTINRWILTELARTERDVTEALEAFRFNDAAGALYRF 706

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V     D Y +  KP      +    +     +  ++ ++  LL  F+P +  +++  
Sbjct: 707 VWNEVCDWYLELLKP-VFSGEDAGAKAEAQACSAYILEEIYKLLHPFMPFMTEELWAH 763



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 23/183 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRREMGREAFIDKIWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++  +  +G IYK      +  +     +D EV +     +      P++     
Sbjct: 154 QAVLEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDMEVEQHEVKGHLWHLRYPLEPGVTY 213

Query: 164 GYF 166
            Y 
Sbjct: 214 QYP 216


>gi|49474415|ref|YP_032457.1| valyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81646962|sp|Q6FZB1|SYV_BARQU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49239919|emb|CAF26318.1| Valyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 907

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 125/355 (35%), Gaps = 43/355 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++          +          +P   +    ++++  ++   +SR+   
Sbjct: 377 PIEPFLTDQWYVCAEQLAKPAVEAVRQGRTQFVPDSWKKTYFNWME-NIQPWCISRQ-LW 434

Query: 216 WG--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTG 243
           WG  I     P                                ++  W  +     +T G
Sbjct: 435 WGHQIPAWYGPDGMVFVEKSEEEALAAAFSHYGEEVELTRDQDVLDTWFSSALWPFSTLG 494

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +        F+P  L V G DI+ F    +          +P P           KG 
Sbjct: 495 WPNKTT-ELDTFYPTSLSVTGFDIIFFWVARMMMMGLHFMGEVPFPTVYVHALVRDQKGA 553

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN+IDP+E+I++   D+LR+ L    A G+D   D   +      + A  + N 
Sbjct: 554 KMSKSKGNIIDPLELIDQYSADSLRFTLAVMAAQGRDVKLDPSRIAG--YRNFATKLWN- 610

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   +    ++            +  IL+  S+ +  +   ++N   + +   +   +
Sbjct: 611 ATRFAKINGVKHNPAFKPEKVKLALNRWILTELSKTVSAVTTGIENYKFNESADALYRFI 670

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                D Y +  KP   +  N +  +     T  V+ ++  LL  F+P +  +++
Sbjct: 671 WNTLCDWYLELLKP-VFQSFNEEAKNEAQACTAWVLDEVYKLLHPFMPHMTEELW 724



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 21/170 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNTTIQDIVVRFERMRGKNVLWQPGMDHAGIATQTVVERQLA 98

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
             +                  +  +      +    L +S D      T ++      R 
Sbjct: 99  ECQEPTRQEMGRERFVERIWEWRHETGGVIANQLRRLGVSCDWSRERFTMDEGLSHAVRE 158

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++  +  +G IYK      +  +     +D EV +     +      P++
Sbjct: 159 VFVTLYKQGLIYKDKRLVNWDPKLLTAISDLEVEQREIKGHLWHFRYPLE 208


>gi|33866926|ref|NP_898485.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81573695|sp|Q7U3N4|SYV_SYNPX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33639527|emb|CAE08911.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 914

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 86/403 (21%), Positives = 138/403 (34%), Gaps = 62/403 (15%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE               Y +    PV+ +    +F R      +     E      +P  
Sbjct: 327 DELGLLVKVEDYRHSVPYSDRGKVPVEPLLSTQWFVRTEPLAARCREALEKQDPRFIPE- 385

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
           R  +V     + ++D  +SR+   WG +IP                              
Sbjct: 386 RWEKVYRDWLTDIRDWCISRQ-LWWGHRIPAWFVISETGGKYTDTTPYVVARNEVEALEK 444

Query: 222 -----------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                      +  + ++  W  +     +T G+ D       +++P    V G DI+ F
Sbjct: 445 AKAKYGAAAVIEQDEDVLDTWFSSGLWPFSTLGWPDAESADLQRWYPTSTLVTGFDIIFF 504

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +   A   +  +P             +  K+SKS GN IDP+ +I+  G DALR+ 
Sbjct: 505 WVARMTMMAGAFTGEMPFQDVYIHGLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFA 564

Query: 329 LVREIA-CGKDGFYDKDG-----LKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PT 379
           LVRE+A  G+D   D D           + + AN + N  +R   M L D        P 
Sbjct: 565 LVREVAGAGQDIRLDYDRKTDTSATVEASRNFANKLWN-ATRFALMNLGDETPAQLGDPD 623

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
           P A   +D  ILS  +RV +E  E   N  +  A   +         D Y +  K     
Sbjct: 624 PAALQLADRWILSRLARVNRETAERYSNYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNP 683

Query: 438 KTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             NP             V  +VI Q+  +L   +P L  +++ 
Sbjct: 684 GENPSAEALADQRVAKQVLAKVISQMHQMLHPLMPHLTEELWH 726



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 36  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTILEK 95

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                                         +     R +   +D     F  T ++   +
Sbjct: 96  QLKQEGKTRHHLGRDGFLERAWQWKAESGGRIVGQLRRLGYSVDWQRQRF--TLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|229196425|ref|ZP_04323172.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228587062|gb|EEK45133.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 1033

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 141/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMSGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|167855810|ref|ZP_02478563.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853089|gb|EDS24350.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 861

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  ESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++          +D  + T    ++   +  + ++  KG +
Sbjct: 90  AVKNKTAPAKWTYENIEYMKNQLKALGFGFDWDREVTTCRPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++           G
Sbjct: 206 LDRLPLWPDQVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 74/178 (41%), Gaps = 20/178 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++          + NL
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNL 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
                    +    +   P A ++  + +     + + ++ +++  +   + A+A ++ L
Sbjct: 677 AYEYA----QSPATVALDPTALSKEQKDLRRDVHKTITKVSDDIGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++++ +      P      + D+A     V  E +  +  +L    P +  +++  L 
Sbjct: 733 MNKLTK-----APLV---NDQDKA-----VMAEALNAVIRMLYPITPHICFELWQALG 777


>gi|313888048|ref|ZP_07821726.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846003|gb|EFR33386.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 1033

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 76/458 (16%), Positives = 158/458 (34%), Gaps = 33/458 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +    G D+      D+ G+      +   V        +     D+         ++  
Sbjct: 330 YQTARGYDLPMLKPVDDDGKFTDTPWKGQFVIDADHDVLHYLMDHDLLFAKQKMLHNYP- 388

Query: 97  TTEKRHHDTCRILWKKISDK-GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                        W+  +      +   Y      +D+   N++ V    D        N
Sbjct: 389 -----------HCWRCHTPLIYYAHPSWYIEVTKFKDKLIENNNGVNWFPDFVGEKRFGN 437

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSR 211
            ++      +    S Y    L  +              + RN+ I  V   ++      
Sbjct: 438 WLE--NLNDWAISRSRYWGTPLPIWRCECGHTESVGSIEDLRNKAIEDVAEDVELHRPYV 495

Query: 212 KTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                       P      ++ VW D+         Y      +  + +PAD    G D 
Sbjct: 496 DDIHIKCPKCGKPMTREADVIDVWFDSGAMPFAQWHYPFENKDNFDELFPADFICEGIDQ 555

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+++   +  ++   P    + +   +  +G+K+SKS GN + P E+ ++ G D +
Sbjct: 556 TRGWFYSLIAISTYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVAPFELFDKYGADVV 615

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           R++L+          +D+DGL++  +          N  S   +    D   +  +    
Sbjct: 616 RWYLLYVSPPWTPTKFDEDGLREIESKFFRSLRNTYNFFSLYANTDKIDPREVKVSYDDL 675

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT 439
            E D+ +LS   R+++ +RE+M+   + + + ++   V     + Y   + ++ W+  K 
Sbjct: 676 EEIDKWLLSKYHRLVKNVREDMEAFELTKVVREIQDFVIEDVSNWYIRRNRRRFWKTDKD 735

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   A  V   T EV+  +  L+   VP L+ ++F  L
Sbjct: 736 NTKIA--VYKTTYEVLLGVTKLIAPMVPFLSEELFKSL 771



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +P I H     + D+  R+H + G  V    G D HG  +   
Sbjct: 37  KDGENYIFYEGPPTANGKPGIHHVMARTLKDLTCRYHTMLGYQVKRKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V +  + +R +   +   I  D    T +  +
Sbjct: 97  VEKRLDLHNKQDIESYGVEAFNKKCKESVFEYEKEWRTLTRRMGYLIDLDHPYITLQNSY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   +  K+   G IY+G     Y  R        EV +G +           +  ++
Sbjct: 157 IESVWHILDKMFKDGLIYEGHKIVPYCPRCGTGLASHEVAQGYEEIKTTTATCRFKLKDK 216

Query: 163 EGYFF 167
           E  +F
Sbjct: 217 ENEYF 221


>gi|120597870|ref|YP_962444.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166231645|sp|A1RGU5|SYL_SHESW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120557963|gb|ABM23890.1| leucyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 859

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   KTFD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGHDKTFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  ++      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASEYIAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALSAVVRLLYPIIPHVSFTLW 772

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    + E+  +  +D+
Sbjct: 773 NDLGNTGSIEDSQWPVVDE 791


>gi|146293957|ref|YP_001184381.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166231643|sp|A4Y9E9|SYL_SHEPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145565647|gb|ABP76582.1| leucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 859

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   KTFD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGHDKTFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPQADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMCKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L S  ++      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLASEYIAQD----NSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALSAVMRLLYPIIPHVSFTLW 772

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    + E+  +  +D+
Sbjct: 773 NDLGNTGSIEDSQWPVVDE 791


>gi|126175469|ref|YP_001051618.1| leucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|307301993|ref|ZP_07581751.1| leucyl-tRNA synthetase [Shewanella baltica BA175]
 gi|125998674|gb|ABN62749.1| leucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|306914031|gb|EFN44452.1| leucyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 874

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 46  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 106 INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 166 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 221

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 222 DTLDGWPDQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 279



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 507 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 566

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 567 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 626

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 627 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 684

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 685 KRLWKLANEHVNQD----NSEALDVSTLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 740

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P        +  E +  +  LL   +P ++  ++
Sbjct: 741 AAVMELMNHLQK-------------APQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLW 787

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 788 NELGNASNIEDSQWPVVDEA 807


>gi|189083229|sp|A6WRJ9|SYL_SHEB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 110/320 (34%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLANEHVNQA----NSEALDVSTLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P   + T  DRA     +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-----AP---QTTGQDRA-----IIGEALSAIVRLLYPIIPHVSFNLW 772

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 773 NELGNASNIEDSQWPVVDEA 792


>gi|218960598|ref|YP_001740373.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729255|emb|CAO80166.1| valyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 882

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 143/390 (36%), Gaps = 38/390 (9%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           D Y         L ++      E++  + G  Y      ++    + +F +++   +K +
Sbjct: 314 DRYACREKVLKMLTEQGLLEKTEIHSYSVGHCYR-CDTVIEPYLSDQWFVKMAPLAEKAI 372

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD---------------------- 215
              E+      P  R  +V     + ++D  +SR+ +                       
Sbjct: 373 EVVENGEIKFQPE-RWTKVYMHWMNNIRDWCISRQIWWGHRIPVYYCDHCSYMIVAKEIP 431

Query: 216 -----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                 G         ++  W  +     +T G+ D     K ++ P+++ +   +I+  
Sbjct: 432 EKCPKCGGTKFTQDSDVLDTWFSSWLWPFSTMGWPDETADLK-RYLPSNVLITAPEIIYL 490

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +          +P    +         G K+SKSLGN  DPI++I  VG DALR+ 
Sbjct: 491 WVARMIMSTLHFVDKIPFDTVLLHGTVRDEIGRKMSKSLGNSPDPIDLINTVGADALRFS 550

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESD 387
           ++     G D  + +  L+     + AN + N   R + M  ++ +G+          +D
Sbjct: 551 MIFGTPKGADVIFSESILE--TGRNFANKMWN-AYRFIMMNAENIEGLPAENELQLELAD 607

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
           + I+S    V+  +R + +N   + A  ++   + +     Y +  K      +      
Sbjct: 608 KWIISRLQEVIIAVRAHYENLRFNDAATEIFKFMWDEFCSWYIELSKDRLNPSSALSSRL 667

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T  Y+ + V++    LL   +P +  +I+ 
Sbjct: 668 TAKYILLYVMQTGMRLLHPIMPFITEEIWQ 697



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +           HIGH     + DV+ R+HR+ G   L+  G D  G      
Sbjct: 32  TAQKPFTVLMPPPNVTGILHIGHVLNNTLQDVVVRYHRMKGEPTLWLPGVDHAGIATQNM 91

Query: 62  AQN--------------AGVTTKVFVDQNSR--NFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                 +  K++  +N +     D   +L  S  +D    T ++   
Sbjct: 92  VEKELAKQGITRQELGREKMVEKIWQWKNEKGNIIIDQLKLLGASCDWDRLRFTMDEMLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
              + ++  + ++G IYKG Y   +  R      +DEV    +  +    H P
Sbjct: 152 RAVKEVFVALYEEGLIYKGKYIINWCPRCVTALANDEVEHTDENGHLWYIHYP 204


>gi|15965269|ref|NP_385622.1| valyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307309292|ref|ZP_07588960.1| valyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|81634651|sp|Q92Q37|SYV_RHIME RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15074449|emb|CAC46095.1| Probable valyl-tRNA synthetase (valine--tRNA ligase) [Sinorhizobium
           meliloti 1021]
 gi|306900293|gb|EFN30910.1| valyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 947

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 126/348 (36%), Gaps = 33/348 (9%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +    +WME    +                 P+  + +ER  E               
Sbjct: 425 NWEKTFFEWMENIQPWCISRQLWWGHQIPAWYGPDGQIFVERNEEEALHAAIQHYIAHEG 484

Query: 211 RK---------TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                       F  G  +  D   ++  W  +     +T G+         K++  D+ 
Sbjct: 485 PMKAYVEDLLENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPKETP-ELDKYYQTDVL 542

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEKISKSLGN 309
           V G DI+ F    W A ++   L   K            V+ H  +  K G+K+SKS GN
Sbjct: 543 VTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQKMSKSKGN 598

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VIDP+E+I+E G DALR+ L    A G+D   D   +      +    + N  +R   M 
Sbjct: 599 VIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMN 655

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                       A    +  IL+  SR ++++ E +++   + A   +   V     D Y
Sbjct: 656 GAISSEGFIPEAASLTINRWILTELSRTIRDVSEAIEDYRFNEAAGALYRFVWNQFCDWY 715

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  KP      +          T  V+ ++  LL  F+P +  ++++
Sbjct: 716 LELLKP-VFNGDDEAAKRESQACTAYVLDEIYKLLHPFMPFMTEELWE 762



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I           H+GHA    + D++ RF R+ G DVL+  G D  G       
Sbjct: 34  DAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPGMDHAGIATQMVV 93

Query: 63  QNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
           +   +  +           F+++                + +    D S + F  T ++ 
Sbjct: 94  ERQLMERQLPSRRDMGREAFIERVWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             +    ++  +  +G IY+      +  + +   +D EV       +      P++
Sbjct: 152 LSEAVIEVFVSLYKEGLIYRDTRLVNWDPKLQTAISDIEVEPVEVNGHLWHLRYPLE 208


>gi|332186042|ref|ZP_08387788.1| valyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332013857|gb|EGI55916.1| valyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 890

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 134/365 (36%), Gaps = 39/365 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           ++    + ++          +    S    I+P        ++++  ++   +SR+ +  
Sbjct: 369 IEPWLTDQWYVDAKTLAQPAIEAVRSGKIKIVPQAWEKTFFNWME-NIQPWCVSRQLWWG 427

Query: 216 ---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
                                       G+ +  DP  ++  W  +      T G+ DN 
Sbjct: 428 HQIPAWFAEDGRVFVAESEEEAQAEAGEGVTLTRDPD-VLDTWFSSALWPFATLGWPDNG 486

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D + A  +P D+ + G DIL F    +         ++P              G K+SKS
Sbjct: 487 DKTLAGRYPNDVLISGFDILFFWDARMMMQGIHFMEDVPFKTLYLHGLVRAADGSKMSKS 546

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN +DP+ +I++ G DALR+F+    + G+D   D+  ++     + A  + N  +R  
Sbjct: 547 KGNTVDPLGLIDQYGADALRFFMAAMESQGRDIKMDERRVEG--YRNFATKLWN-AARFA 603

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
                    M+  P A    ++ I++   + +Q +   + +     A   +   V     
Sbjct: 604 QANGIGASTMLEAPNATLAVNKWIIAETVKTVQAVDLALADYRFDGAANAIYQFVWSRFC 663

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           D Y +  KP  + +   +       V   V+ Q+ +LL  F+P +  +++  +   D + 
Sbjct: 664 DWYLELIKP--VLQGGEEGGEETRAVAGWVLDQILVLLHPFMPFITEELWHAMGARDHDL 721

Query: 485 CFQSL 489
                
Sbjct: 722 IVAHW 726



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 48/145 (33%), Gaps = 22/145 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA +  + D+L R  RL G D L+  GTD  G       + 
Sbjct: 35  EPWTIVNPPPNVTGNLHIGHALDNTLQDILVRHARLKGKDALWVVGTDHAGIATQMVVER 94

Query: 65  AGVT--------------TKVFVD------QNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+        Q +   R +   +D + + F  T ++    
Sbjct: 95  QMNARGEKRTDFTRDQFLEKVWTWKAESGGQITGQLRRLGCSMDWANERF--TMDEGFSK 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYS 129
               ++  +  +G +Y+      + 
Sbjct: 153 AVLKVFVDLYRQGLLYRDKRLVNWD 177


>gi|307317033|ref|ZP_07596474.1| valyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897121|gb|EFN27866.1| valyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 947

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 126/348 (36%), Gaps = 33/348 (9%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +    +WME    +                 P+  + +ER  E               
Sbjct: 425 NWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGQIFVERNEEEALHAAIQHYIAHEG 484

Query: 211 RK---------TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                       F  G  +  D   ++  W  +     +T G+         K++  D+ 
Sbjct: 485 PMKAYVEDLLENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPKETP-ELDKYYQTDVL 542

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEKISKSLGN 309
           V G DI+ F    W A ++   L   K            V+ H  +  K G+K+SKS GN
Sbjct: 543 VTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQKMSKSKGN 598

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VIDP+E+I+E G DALR+ L    A G+D   D   +      +    + N  +R   M 
Sbjct: 599 VIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMN 655

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                       A    +  IL+  SR ++++ E +++   + A   +   V     D Y
Sbjct: 656 GAISSEGFIPEAASLTINRWILTELSRTIRDVSEAIEDYRFNEAAGALYRFVWNQFCDWY 715

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  KP      +          T  V+ ++  LL  F+P +  ++++
Sbjct: 716 LELLKP-VFNGDDEAAKRESQACTAYVLDEIYKLLHPFMPFMTEELWE 762



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I           H+GHA    + D++ RF R+ G DVL+  G D  G       
Sbjct: 34  DAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPGMDHAGIATQMVV 93

Query: 63  QNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
           +   +  +           F+++                + +    D S + F  T ++ 
Sbjct: 94  ERQLMERQLPSRRDMGREAFIERVWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             +    ++  +  +G IY+      +  + +   +D EV       +      P++
Sbjct: 152 LSEAVIEVFVSLYKEGLIYRDTRLVNWDPKLQTAISDIEVEPVEVNGHLWHLRYPLE 208


>gi|219871152|ref|YP_002475527.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691356|gb|ACL32579.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 862

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 31  ESKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++          +D  + T    ++   +  + ++  KG +
Sbjct: 91  AVKNKTAPAKWTYENIEYMKNQLKALGFGFDWDREVTTCRPEYYKWEQWFFTELYKKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+ 
Sbjct: 151 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLND 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++           G
Sbjct: 207 LDRLPLWPDQVKTMQRNWIGRSEG 230



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 74/178 (41%), Gaps = 20/178 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++          + NL
Sbjct: 620 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNL 677

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
                    +    +   P A ++  + +     + + ++ +++  +   + A+A ++ L
Sbjct: 678 AYEYA----QSPATVALDPTALSKEQKDLRRDVHKTIAKVSDDIGRRQTFNTAIAAIMEL 733

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++++ +      P      + D+A     V  E +  +  +L    P +  +++  L 
Sbjct: 734 MNKLTK-----APLV---NDQDKA-----VMAEALNAVIRMLYPITPHICFELWQALG 778


>gi|111018328|ref|YP_701300.1| valyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817858|gb|ABG93142.1| valine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 902

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 120/371 (32%), Gaps = 61/371 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++ +          +    I P  +     ++V   + D  +SR+   W
Sbjct: 366 IEPRLSLQWWVKVESLAKAAGDAVRNGDTVIHPASQEPRWFAWVDD-MHDWCISRQ-LWW 423

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +       K
Sbjct: 424 GHRIPIWYGPDGEVACFGPDETAPEGWVQDPDVLDTWFSSGLWPFSTMGWPEKTP-ELEK 482

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA------------------------NLPLPKKV 290
           F+P  + V G DIL F       F                             +P     
Sbjct: 483 FYPTSVLVTGYDILFFWVARMMMFGTYVSEDDAIAGRGERSDGVFSEGKSGPQVPFEDVF 542

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                    G+K+SKS GN IDP++ ++  G DALR+ L R    G D    +D  +   
Sbjct: 543 LHGLVRDQFGKKMSKSRGNGIDPLDWVDRFGADALRFTLARGANPGSDLSVGEDHAQSSR 602

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQ 408
           N   A  + N    +    L +     P PG    T++D  IL    +V  E+       
Sbjct: 603 N--FATKLFN----ATKFALMNGAAPAPLPGRDQLTDADRWILDRLEQVRGEVDAAFDRY 656

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
              +A   +     +   D Y +  K       N   A+    V   V+  L  LL   +
Sbjct: 657 EFSKACEALFHFAWDEVCDWYLELAK--VQFAENDTIAANTRAVLGNVLDALLRLLHPVI 714

Query: 467 PKLANKIFDIL 477
           P +   ++  L
Sbjct: 715 PFVTETLWKAL 725



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA +  + D L+R  R+ G +VL+  G D  G      
Sbjct: 45  SDKPGYSIVLPPPNVTGSLHMGHALDHTLMDALSRRKRMQGYEVLWLPGMDHAGIATQTV 104

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T +  
Sbjct: 105 VEKQLAVDGKTKEDFGRELFIEKVWDWKRESGGTIGGQMRRIGDSVDWSRDRF--TMDDG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D G IY+      +S   +   +D EV  
Sbjct: 163 LSRAVQTIFKRMYDDGLIYRAERLVNWSPVLQTAISDIEVKF 204


>gi|20094860|ref|NP_614707.1| valyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74559149|sp|Q8TVG5|SYV_METKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19888087|gb|AAM02637.1| Valyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 914

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 94/464 (20%), Positives = 167/464 (35%), Gaps = 37/464 (7%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
            +   D+      DE G+    A + AG+  +          ++   ++           
Sbjct: 306 WVKRHDLPIVRAIDEQGKMTEVAGEFAGMEVEEARAAIVEALKEEGYLVK---------- 355

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++      + W+  +    + K  +        E                     +  +
Sbjct: 356 REKITQNVGVCWRCKTPIEILVKEQWFVKVRELAEDVKEAARKMVWIPEHMRKRLEDWTE 415

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            M+ +    R   +   +  +Y      ++P E+    +   +               G 
Sbjct: 416 SMDWDWCISRQRIFATPIPVWYCKECGEVIPAEKDQLPVDPTRDDPPVDEC----PKCGC 471

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--P 276
              +    +M  W+D+    L  TG+       +    P DL   G DI+R    Y    
Sbjct: 472 SEFEPETDVMDTWMDSSITPLVITGWP-----DEEPDLPVDLRPQGHDIIRTWLYYTTVR 526

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A + +   P  + + +       G K+SKS GNV++P EVIEE G DALRY+ V   A G
Sbjct: 527 ALVHADTEPFKEILINGMVFGEDGYKMSKSRGNVVEPTEVIEEYGADALRYWAVSSGAPG 586

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  Y    +K+      A  I N V R     + D   +    G  T +D  ILS   R
Sbjct: 587 SDVQYMTKTIKRGYR--FAKKIWN-VCRLAKDHIDDAPSVEEVEGDLTPADRWILSKFHR 643

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSE--VDRYFDAQK-----PWELKKTNPDRASTVL 448
           ++ E+ E++++    + A+  +     E   D Y +  K     P EL + + + A  V 
Sbjct: 644 LVDEVTEHLESGYRFNDAIKAIEEFAWEELADDYLEMAKLRLYRPEELGEGSREAARAV- 702

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                V+  L  LL  F+P +  +++  LF  DE+   Q+  + 
Sbjct: 703 --LRHVLDGLLRLLAPFMPFVTEELYYRLF--DESVHDQAWPEA 742



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 62/185 (33%), Gaps = 29/185 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       DV+AR+ R+ G DV F  G D HG      
Sbjct: 35  EDRPAFVIDTPPPYPTGELHMGHVLNWTYMDVVARYKRMCGYDVFFPQGWDCHGLPTEVK 94

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYDDF-------------- 94
            +     TK                 +N R  R+    L  S D +              
Sbjct: 95  VEEIHGITKRDAPRREFRKLCEELTLENIRKMREQLIQLGCSIDWWTDCIDYENEELKEL 154

Query: 95  --IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
               T +  +    +  + ++ +KG  Y+  +   +  R E      EV       Y N 
Sbjct: 155 GSYVTMDPDYIRRSQYGFLELLEKGYAYREEHPVNWCPRCETAIAFAEVEYVTRETYLNY 214

Query: 153 QHNPV 157
              PV
Sbjct: 215 IEFPV 219


>gi|78185780|ref|YP_378214.1| valyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78170074|gb|ABB27171.1| Valyl-tRNA synthetase, class Ia [Synechococcus sp. CC9902]
          Length = 925

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 83/391 (21%), Positives = 136/391 (34%), Gaps = 62/391 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +            LP  R  +V     + ++D  +SR+   
Sbjct: 362 PVEPLLSTQWFVKTEPLAARCREALAEQDPRFLPD-RWEKVYRDWLTDIRDWCISRQ-LW 419

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 420 WGHRIPAWFVISETDGKYTDTTPYVVARDEAEALQKAKAEYGAAAQIEQDEDVLDTWFSS 479

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    V G DI+ F    +   A   +  +P       
Sbjct: 480 GLWPFSTLGWPDANAPDLNRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEMPFKDVYIH 539

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK--- 348
                 +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D  K    
Sbjct: 540 GLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDYDRKKDTSA 599

Query: 349 --RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  +R   M L          P P A   +D  ILS  +RV +E   
Sbjct: 600 TVEASRNFANKLWN-ATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLARVNRETAG 658

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIR 456
              +  +  A   +         D Y +  K       NP         T   V  +VI 
Sbjct: 659 RYGSYALGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRTAKQVLAKVIS 718

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           Q+ ++L   +P L  +++  +    E     
Sbjct: 719 QMHLMLHPLMPHLTEELWHSVTAEGEATLLA 749



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 19/171 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           E E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    
Sbjct: 45  EGEPFAVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQSIL 104

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADV--------------LDISYDDFIRTTEKRHHD 104
            K  +  G T      +                           + +     T ++   +
Sbjct: 105 EKQLKEEGKTRHDLGREAFLERAWQWKAESGGRIVGQLRRLGYSVDWKRQRFTLDEGLSE 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 165 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 215


>gi|295704836|ref|YP_003597911.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294802495|gb|ADF39561.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 1032

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/390 (15%), Positives = 139/390 (35%), Gaps = 12/390 (3%)

Query: 100 KRHHDTCRILWKKISD--KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           K  H+       +          +  +    +L+++   N++ V    D   +    N +
Sbjct: 377 KEKHEHSYPFCWRCDSPLLYYANESWFIQTTALKEQFLKNNESVTWYPDHIKHGRFGNFL 436

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER---RNEVISFVKSGLKDLSLSRKTF 214
           + M +     +        +   E     + P      +     +V   ++         
Sbjct: 437 ENMVDWNISRKRYWGTPLNVWECEGCQHQVAPKSIKELQKHASHYVDDSIELHKPYVDDV 496

Query: 215 DWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                +          ++ VW D+ +       Y    +    K +PAD+   G D    
Sbjct: 497 QLTCPVCSGEMKRTPEVIDVWFDSGSMPFAQYHYPFENNELFRKQFPADVIAEGIDQTRG 556

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L +   P  + +     +   G+K+SKS GN +DP+E+I   G DALR+ 
Sbjct: 557 WFYSLMAVSTLFTGKAPYKRVLSLGHVLDENGQKMSKSKGNALDPVELIHTFGADALRWA 616

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           ++ + A      + +  +++  +  +   +       +   L  YD         T+ DE
Sbjct: 617 ILADSAPWNPKKFSERVVQEAKSKVIDTLVNVYGFYVLYAKLDGYDPKQTYELKKTKLDE 676

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
            ILS     ++    ++++     A  ++ + + E+ + Y    +     +      +  
Sbjct: 677 WILSRLHSTVKRATVHLEDYGFTNAAREIAAFIEELSNWYVRRSRDRFWSEGMDGEKAAA 736

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                EV+  L+ LL  F P +A+ + + L
Sbjct: 737 YDTLHEVLVTLSQLLAPFTPFVADDVHENL 766



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  PH+GHA    I DV+AR+  + G  V+   G D HG  +   
Sbjct: 35  EGHPSFVFYEGPPTANGLPHVGHALGRTIKDVVARYKTMTGHQVIRKAGWDTHGLPVELG 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +R   + L   +  +D   T +  +
Sbjct: 95  VEKQLGISGKHDIEKYGVEAFINKCKESVFVYEKQWRTFTEQLGYWVDMEDPYITLKNSY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   I DKG +YKG     Y    +   +  EV +G  
Sbjct: 155 IESVWNVLGTIHDKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|15889025|ref|NP_354706.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493741|sp|Q8UEN6|SYV_AGRT5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15156816|gb|AAK87491.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 947

 Score =  169 bits (429), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 133/394 (33%), Gaps = 75/394 (19%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++          ++         +P    N    +++  ++   +SR+   
Sbjct: 390 PIEPRLTDQWWVDNKTLAQPAIASVREGRTNFVPKNWENTYFQWME-NIQPWCISRQ-LW 447

Query: 216 WG--IKIPDDPQY----------------------------------------------- 226
           WG  I     P                                                 
Sbjct: 448 WGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYIAHEGPWKAWVEEKLENFAPGEILTRDE 507

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
            ++  W  +     +T G+ +      A+++P ++ V G DI+ F    W   ++   L 
Sbjct: 508 DVLDTWFSSALWPFSTLGWPEQTP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLH 562

Query: 286 LPKK-----------VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    
Sbjct: 563 FMKDDAGNPVEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMA 622

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           A G+D   D   +      +    + N  +R   M     D       A    +  IL+ 
Sbjct: 623 AQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGVKRDPHFLAETASLTINRWILTE 679

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +   +++   ++N   + A   +   V     D Y +  KP      + +         
Sbjct: 680 LANTARDVTAALENFRFNDASGILYRFVWNQFCDWYLELLKP-VFSGEDEEAKRESQACA 738

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
             V+ ++  LL  F+P +  +++       E R 
Sbjct: 739 AYVLEEIYKLLHPFMPFMTEELWAHTAGEGEERD 772



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 23/176 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             +                 KV+  +           + +    D S + F  T ++   
Sbjct: 96  KLMENQLPGRREMGREAFVEKVWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +    ++  +  +  IYK      +  + +   +D EV +            P++ 
Sbjct: 154 EAVLEVFVTLYKQNLIYKAKRLVNWDPKLQTAISDMEVEQIEVKGNLWHFRYPLEK 209


>gi|90416857|ref|ZP_01224786.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331204|gb|EAS46448.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 867

 Score =  169 bits (429), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  DREKFYCLAMFPYPSGKLHMGHVRNYTITDVIARYQRMQGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +         I +   + T +  ++   +  + K+ +KG +Y
Sbjct: 91  IQNKTAPAKWTHENIAYMKAQLKSLGFGIDWSRELATCDPDYYKWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G          +PV+  E   +F R++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDATVLANEQVIDG----CCWRCDSPVERKEIPQWFIRITDYAEQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DELEHWPEQVKTMQRNWIGKSRG 229



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 18/193 (9%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N +DP   I++ G D +R F +      +   +  DG+           +  +
Sbjct: 622 KMSKSKNNGVDPQTAIDKHGADTVRLFTMFAAPPEQTLEWSDDGVSGAHR--FLRKLWTM 679

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V   +             P +  ES + +       + ++ ++   +   + A+A V+ L
Sbjct: 680 VHSHLDQAAAGGKPAQIHPESLNESHKDLRRKTHETINKVNDDYGRRNTFNTAIAAVMEL 739

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++EV             K + + A +V  V  E +    +LL    P + + ++  L  +
Sbjct: 740 LNEV------------AKHSDNDAQSV-AVRQEALNSAVLLLAPIAPHICHSLWSALGNS 786

Query: 481 D--ENRCFQSLDQ 491
           +   +  +  LD+
Sbjct: 787 EAVADAAWPKLDE 799


>gi|228914790|ref|ZP_04078399.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845109|gb|EEM90151.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 1033

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K +     H     P     E +   K  + ++ +S +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIDDLRKHSTKETP-----EDLELHKPYVDEVQVSCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSAMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|189083230|sp|A9L001|SYL_SHEB9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|315268747|gb|ADT95600.1| leucyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 859

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPDQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLANEHVNQD----NSEALDASKLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P        +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-------------APQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLW 772

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 773 NELGNASNIEDSQWPVVDEA 792


>gi|118477612|ref|YP_894763.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|166200197|sp|A0RDG3|SYI_BACAH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118416837|gb|ABK85256.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 1033

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMTRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +   P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKAPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLINVYSFYVLYANLDEYNPHETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHVNL 766



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMVGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            +KG +YKG     Y    +   +  EV +G       +     +  + E  +F
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYKTVKDLSATVKFEVKDSENEYF 219


>gi|42781306|ref|NP_978553.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81569209|sp|Q739A1|SYI2_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|42737228|gb|AAS41161.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 1033

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +S +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSTKETP-----EDLELHKPYVDEVQVSCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y           +PAD+   G D     F++
Sbjct: 503 -CGGAMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEDQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPDETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|124026858|ref|YP_001015973.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961926|gb|ABM76709.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 933

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 83/389 (21%), Positives = 141/389 (36%), Gaps = 64/389 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++         ++E      +P  R ++V     + ++D  +SR+   
Sbjct: 370 PVEPLLSTQWFVKMDPLSSSCSEFFEKGQPKFIP-NRWSKVYRDWLTDIRDWCISRQ-LW 427

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +KI  D   ++  W  
Sbjct: 428 WGHRIPAWFVISQTDNKVVNETPYIVARTEDEAKKLAREKYGDSVKIEQDED-VLDTWFS 486

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D       +++P +  V G DI+ F    +   A + +  +P      
Sbjct: 487 SGLWPFSTLGWPDETHPDFQRWYPTNTLVTGFDIIFFWVARMTMMAGVFTERMPFADVYI 546

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-- 348
                  +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D   +  
Sbjct: 547 HGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDFDRKNQTS 606

Query: 349 ---RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R   + L+D D              SD  ILS  +RV  E  
Sbjct: 607 ATVEASRNFANKLWN-ATRFALINLEDQDYENLESYDSSKLQLSDRWILSRLARVNHETA 665

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPW-----ELKKTNPDRASTVLYVTVEVI 455
              +N  +  A   +         D Y +  K        L             V  +V+
Sbjct: 666 NRYENYALGEAAKGLYEFAWNDFCDWYLELIKRRLNNSENLSSDELLDRKIAKSVLYKVL 725

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
             L I+L   +P L  +++  L   DE++
Sbjct: 726 SDLLIMLHPLMPHLTEELWHGLTGLDEDQ 754



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 19/172 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 48  DPFSVVIPPPNVTGSLHMGHAFNTALIDTVVRYKRLKGNNVLCLPGTDHASIAVQTILER 107

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + +++     D    L  S D      T ++      
Sbjct: 108 QLKEEGKNRRDLGRASFLEKAWEWKEKSGGRIVDQLKRLGYSVDWSRERFTLDEGLSKAV 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPV 157
              + ++ +KG IY+G Y   +     +  +D EV     DG  ++ ++  V
Sbjct: 168 SEAFVRLHEKGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRYPLV 219


>gi|72383119|ref|YP_292474.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|90101543|sp|Q46IA7|SYV_PROMT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72002969|gb|AAZ58771.1| valyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 933

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 83/389 (21%), Positives = 141/389 (36%), Gaps = 64/389 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F ++         ++E      +P  R ++V     + ++D  +SR+   
Sbjct: 370 PVEPLLSTQWFVKMDPLSSSCSEFFEKGQPKFIP-NRWSKVYRDWLTDIRDWCISRQ-LW 427

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          +KI  D   ++  W  
Sbjct: 428 WGHRIPAWFVISQTDNKVVNETPYIVARTEDEAKKLAREKYGDSVKIEQDED-VLDTWFS 486

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ D       +++P +  V G DI+ F    +   A + +  +P      
Sbjct: 487 SGLWPFSTLGWPDETHPDFQRWYPTNTLVTGFDIIFFWVARMTMMAGVFTERMPFADVYI 546

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-- 348
                  +  K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D D   +  
Sbjct: 547 HGLVRDEQNRKMSKSAGNGIDPLLLIERYGTDALRFALVREVAGAGQDIRLDFDRKNQTS 606

Query: 349 ---RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIR 402
                + + AN + N  +R   + L+D D              SD  ILS  +RV  E  
Sbjct: 607 ATVEASRNFANKLWN-ATRFALINLEDQDYENLESYDSSKLQLSDRWILSRLARVNHETA 665

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPW-----ELKKTNPDRASTVLYVTVEVI 455
              +N  +  A   +         D Y +  K        L             V  +V+
Sbjct: 666 NRYENYALGEAAKGLYEFAWNDFCDWYLELIKRRLNNSENLSSDELLDRKIAKSVLYKVL 725

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENR 484
             L I+L   +P L  +++  L   DE++
Sbjct: 726 SDLLIMLHPLMPHLTEELWHGLTGLDEDQ 754



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 19/172 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 48  DPFSVVIPPPNVTGSLHMGHAFNTALIDTVVRYKRLKGNNVLCLPGTDHASIAVQTILER 107

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + +++     D    L  S D      T ++      
Sbjct: 108 QLKEEGKNRRDLGRASFLEKAWEWKEKSGGRIVDQLKRLGYSVDWSRERFTLDEGLSKAV 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPV 157
              + ++ +KG IY+G Y   +     +  +D EV     DG  ++ ++  V
Sbjct: 168 SEAFVRLHEKGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRYPLV 219


>gi|254500225|ref|ZP_05112376.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222436296|gb|EEE42975.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 979

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 134/387 (34%), Gaps = 58/387 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F       +  L   +      +P        +++   ++   +SR+   W
Sbjct: 451 IEPMLTDQWFVDAKTLAEPALKAVQDGDTKFVPGNWDKTYYNWLND-IQPWCISRQ-LWW 508

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I +  D                            ++  W  +     +T G+     
Sbjct: 509 GHQIPVWYDEDGNEYCAMSEDEAVEMSGGKTLMRDEDVLDTWFSSALWPFSTLGWPHQTP 568

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKI 303
               +++  D+ + G DI+ F    W A ++   +   K+V  H   ++       G+K+
Sbjct: 569 -ELERYYKTDVLITGFDIIFF----WVARMMMQGIHFMKEVPFHTVYINSIVVDKNGKKM 623

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGNV+DP+E+I   G DA RY L  +   G+                 A  + N   
Sbjct: 624 SKSLGNVLDPLEMIASYGADATRYALASQEVQGRRT-LRMSDQAAEGGQRFATKLWNAAR 682

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
            +        +G  P+  + T  +  I +   + + E+ + + +   + A   +      
Sbjct: 683 FAEMNGCGRVEGFDPSTASHT-LNRWIATEMGKCIAEVTQALDDYRFNDASGGIYRFTWN 741

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D Y +  KP      +    +         I ++  +L  F+P L  ++++ L    
Sbjct: 742 TFCDWYLELAKP-IFNGDDEAAKAETRATAAWAIDEILKVLHPFMPFLTEELWERLG--- 797

Query: 482 ENRCFQSLDQRLKPG--FMLHKTFDPI 506
                   D+  K G   ML     P+
Sbjct: 798 --------DEGQKAGELLMLSAWPKPL 816



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 23/186 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             I           H+GHA    + D+L R+ R+ G DVL+  GTD  G           
Sbjct: 41  FTIVIPPPNVTGSLHMGHALNNTLQDILVRWKRMQGYDVLWQPGTDHAGIATQMVVEREL 100

Query: 60  ---KAAQNAGVTTKVFVDQNSRNF-----------RDMADVLDISYDDFIRTTEKRHHDT 105
                     +  + F+++                + +    D S  +F  T      D 
Sbjct: 101 AADNKPGRRDMGREAFIERVWEQKRKSEGTILGQLKRLGASCDWSRTEF--TMSPNLSDA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              ++  +  +G IY+      +  + E   +D EV       +      P+   E   Y
Sbjct: 159 VLKVFVDLYKEGLIYRSKRLVNWDPKFETAISDLEVENIETDGHMWHFKYPLAGGETYEY 218

Query: 166 FFRLSA 171
             +   
Sbjct: 219 VEKDED 224


>gi|49477540|ref|YP_036324.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81396231|sp|Q6HJF2|SYI2_BACHK RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|49329096|gb|AAT59742.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 1033

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +S +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSTKETP-----EDLELHKPYVDEVQVSCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSAMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFTKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|196039843|ref|ZP_03107147.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029546|gb|EDX68149.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 1033

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 143/360 (39%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K +     H
Sbjct: 421 TWYPNHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---DHQFAPKSIDDLRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P     E +   K  + ++ +S +    G  +   P+ ++ VW D+ +       
Sbjct: 478 STKETP-----EDLELHKPYVDEVQVSCEK--CGSAMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++E+ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       +V+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|228927261|ref|ZP_04090323.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832408|gb|EEM77983.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 1033

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 74/389 (19%), Positives = 149/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +S +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSTKETP-----EDLELHKPYVDEVQVSCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSAMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|304410296|ref|ZP_07391915.1| leucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|189083228|sp|A3D7N6|SYL_SHEB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|304351705|gb|EFM16104.1| leucyl-tRNA synthetase [Shewanella baltica OS183]
          Length = 859

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPDQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLANEHVNQD----NSEALDVSTLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P        +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-------------APQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLW 772

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 773 NELGNASNIEDSQWPVVDEA 792


>gi|254414971|ref|ZP_05028734.1| valyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196178118|gb|EDX73119.1| valyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 917

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 144/423 (34%), Gaps = 65/423 (15%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 Y +    PV+ +    +F ++    DK L   + H       +R  +V      
Sbjct: 342 YHHTVPYSDRGKVPVEPLLSTQWFVKIRPLADKALESLDQHHSPNFVPDRWTKVYRDWLV 401

Query: 203 GLKDLSLSRKTFDWG------------------------------------------IKI 220
            L+D  +SR+   WG                                          +K+
Sbjct: 402 KLEDWCISRQ-LWWGHQIPAWYAVSETGGQITDNTPFIVAHSEAEALEKAKSQFGESVKL 460

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             DP  ++  W  +     +T G+          ++P  + V G DI+ F    +     
Sbjct: 461 IQDPD-VLDTWFSSGLWPFSTMGWPQQTP-DLETYYPTTVLVTGFDIIFFWVARMTMMGG 518

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGK 337
             +  +P               +K+SKS  N IDP+ +IE+ G DALRY L+RE+A  G+
Sbjct: 519 YFTDQMPFQTVYIHGLVRDENNKKMSKSANNGIDPLLLIEKYGTDALRYTLIREVAGAGQ 578

Query: 338 DGFYDKDGL-KKRVNADLANGIGNLVSRSVSMILKDYDGMIP---------TPGAFTESD 387
           D   + +    +  + + +    N +  +   ++ + DG  P                 D
Sbjct: 579 DIRLEYNRQTDESASVEASRNFANKLWNAARFVMMNLDGKSPQVLGSPLAQERDTLELCD 638

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
             ILS   +V+ + R++     +  A   +   +     D Y +  K   L++       
Sbjct: 639 RWILSRFYQVVTQTRQDFDQYGLGEAAKGLYDFIWGDFCDWYIELVKQ-RLRQQGTQSRH 697

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
                   V+  +  LL  F+P +  +I+  L      +  + L  +  P     +T   
Sbjct: 698 IAQQTLAHVLDGILKLLHPFMPHITEEIWHTL----TQKTDECLALQPYPALPDSETEPG 753

Query: 506 IFP 508
            FP
Sbjct: 754 AFP 756



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 22/166 (13%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----KAAQNAGV 67
                    H+GHA    I D+L R++R+ G + L+  GTD     ++    +  +  G 
Sbjct: 47  PPPNVTGSLHMGHALGQTIMDILVRYNRMKGFNTLWVPGTDHASIAVSTILDRQLKAEGK 106

Query: 68  TTKVFVDQNSRNFRDMAD----------------VLDISYDDFIRTTEKRHHDTCRILWK 111
           T +    +   N                       +D S + F  T ++   +     + 
Sbjct: 107 TRQEVGRETYLNRAWQWKEESGGWIVNQLRRLGVSVDWSRERF--TMDEGLSNAVLEAFV 164

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ D G IY+G Y   +  + ++  +D EV       +      P+
Sbjct: 165 QLYDAGLIYRGEYMVNWCPQSQSAVSDLEVENKEVNGHLWHFRYPL 210


>gi|193215275|ref|YP_001996474.1| valyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193088752|gb|ACF14027.1| valyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 904

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 130/394 (32%), Gaps = 60/394 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F ++    +  L   E       P    N         ++D  +SR+   W
Sbjct: 364 VEPFLSEQWFVKMKPLAEPALKAVEDGEIHFHPERWINT-YRHWMENIQDWCISRQ-LWW 421

Query: 217 G--IKIPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPD 249
           G  I    D +  +YV                         W  +    LTT  +    D
Sbjct: 422 GHRIPAWYDEEGNIYVAHNEEEAEKLSGKKNLRQDEDVLDTWFSSWLWPLTTLRWEKPGD 481

Query: 250 GS--KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                  F+P    V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 482 DGEVFEAFYPTSTLVTGPDIIFFWVARMIMAGLYFKGDVPFRDVYFTSIIRDMKGRKLSK 541

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP+ V++E G DALR+ ++     G+D  +  +  ++    + A  I N  +R 
Sbjct: 542 SLGNSPDPLAVMDEYGTDALRFTVIYLAPLGQDVLFGAEKCEQ--GRNFATKIWN-ATRF 598

Query: 366 VSMI-----------LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           + M             K Y      P    E+++ I S  +  L+     M    I+   
Sbjct: 599 LFMNRNELFENEADFAKKYAETDFAPDPNDEAEKWIFSRLNSTLKSYHGAMAQFRINDLT 658

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D + +  K    K     +   +L   + +       L   +P +  +
Sbjct: 659 KILYDFIWGDYCDWFLEMMKVRLQKAETAAQKQAILCKAIFIFESAVKALHPIMPFVTEE 718

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           I+  +   +E                  K  +P+
Sbjct: 719 IWQNILQRNEGESISE-----------VKIPEPL 741



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +            IGH     + D+  R+HR+ G + L+  GTD  G      
Sbjct: 45  SGKKPYTVLMPPPNVTGSLTIGHVLNHTLQDIFIRYHRMMGHEALWLPGTDHAGIATQTV 104

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++           L +S D    + T ++   
Sbjct: 105 VERRLRKENVTRHDLGREKFLEHVWQWREEYGGLIVKQLQRLGVSCDWRRNLFTMDETAS 164

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                ++ K+ + G IYKG     +    +   +D+EV  
Sbjct: 165 RAVVNVFVKLYNDGLIYKGKRIINWCPVSQTALSDEEVIM 204


>gi|159036691|ref|YP_001535944.1| methionine--tRNA ligase [Salinispora arenicola CNS-205]
 gi|157915526|gb|ABV96953.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 671

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 98/532 (18%), Positives = 189/532 (35%), Gaps = 42/532 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             +++ +    PN   H+GH     + AD   RF R++G +    TG+D++   +   A+
Sbjct: 121 RPVFVFSTPPTPNGDLHLGHLSGPYLGADAFVRFQRMNGTEAWHLTGSDDYQSYVVNTAR 180

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG 122
             G        + S        ++DI+ D +  T TE  +    R  + ++   G     
Sbjct: 181 REGRAPAETAARYSAEIAQTLAMMDINPDQYTVTDTEPGYRQGLRNFFSQVIASGRATVT 240

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +      Y  + +V  G  G   +   N  +   E      L   +         
Sbjct: 241 ERDALFDGESGRYLYEADVRGGCPGCGESTSGNICEECGEPNTVVDLRQPRSNESDAEPR 300

Query: 183 HPE---FILPIERRNEVISFVK---------SGLKDLSLSRKTFD--------WGIKIPD 222
                 + LP+ +  + +S              L D   +R   D        WG+   +
Sbjct: 301 RAPLARWSLPLHQFRDEVSTHHSLGRVPARLRELGDRLFARPVLDIPLSHPADWGVPPAE 360

Query: 223 DP--QYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDILRFH 271
                 +++VW +    +L             +         K     +H  G D   +H
Sbjct: 361 KDVDDQVIWVWPEMSYGFLHGIEALGARLGRGWQAAVPEQDWKI----VHFFGYDNSFYH 416

Query: 272 AIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A+ +P     A+      +  H   F L +GEK S S  + I   E+++E  VDA+RYFL
Sbjct: 417 AVLYPVLYRLAHPGWQPDIDYHVNEFYLLEGEKFSTSRRHAIWGKEILDEDTVDAVRYFL 476

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
            R     +   + +   +  ++  L       ++   + I + YDG  P  G +T    +
Sbjct: 477 SRTRPEAERTNFRRADFRSVLHDTLIGTWQRWLNDLGARIARHYDGKAPDAGIWTPEHSA 536

Query: 390 ILSVCSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            L+     L  +   +      +++A A++ +LV+E  R+   +          D A T 
Sbjct: 537 FLARLGGRLDAVTGCLRADGFSLNQAAAELDALVAETLRFVGREARTARSAGWQDEARTA 596

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + + +   R LA +    +P+ A  +   L +      +    + + PG  +
Sbjct: 597 VALELAAARLLASVATPLMPRFAGHLATALGLPK-PTVWPQAVELVPPGSAV 647


>gi|39997143|ref|NP_953094.1| valyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81702023|sp|Q74BJ6|SYV_GEOSL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39984033|gb|AAR35421.1| valyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506156|gb|ADI84879.1| valyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 887

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 143/369 (38%), Gaps = 49/369 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      ++ ++    ++ L+  +     I+P +  N    +++  +KD  +
Sbjct: 348 CYRCKTVVEPYLSLQWYVKVGPLAERALAAVKDGRTRIVPQQWENTYYDWME-NIKDWCI 406

Query: 210 SRKTFDWGIKIP----------------------------DDPQYIMYVWIDALTNYLTT 241
           SR+   WG +IP                                 ++  W  +     +T
Sbjct: 407 SRQ-IWWGHRIPAWYCDHCGETTVAKIDPTVCAACGSDEIRQETDVLDTWFSSALWPFST 465

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH--- 298
            G+ D      A F+P    V G DIL F    W A ++   L    +V      +H   
Sbjct: 466 MGWPDRTP-ELAAFYPTSCLVTGFDILFF----WVARMMMMGLHFMNEVPFSDVYIHALV 520

Query: 299 ---KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G+K+SKS GNVIDP+ VI++ G DA R+ L    A G+D    ++ +      +  
Sbjct: 521 RDAQGQKMSKSKGNVIDPLVVIDQYGTDAFRFTLAAFAAQGRDIKLAEERIAG--YRNFV 578

Query: 356 NGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           N I N  SR   M L+ +  D + P     + +D  IL   +    E  E ++    + A
Sbjct: 579 NKIWN-ASRFALMNLEGFEPDTVDPATLDLSNADRWILHRLNSAAAETAEALEAYRFNDA 637

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +         D Y +  K  +L + +  R  T  YV   V+  L  LL  F+P +  
Sbjct: 638 AGTLYRFTWSEFCDWYIELAKD-DLYRGDDARKETARYVLWLVLENLLRLLHPFMPFITE 696

Query: 472 KIFDILFVA 480
           +I+  L  A
Sbjct: 697 EIWQTLPGA 705



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 55/176 (31%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
             +    I           H+GHA    + D+L R+ R++G +VL+  GTD  G      
Sbjct: 35  SGKPSYSIVIPPPNVTGALHMGHALNNTLQDILCRWKRMNGYEVLWMPGTDHAGIATQNV 94

Query: 61  ------------------AAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q     + +    D   + F  T ++ 
Sbjct: 95  VERQLAGEGTSRHELGREAFIERVWKWKAESGGQIIGQLKRLGASCDWGRERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R ++ ++ ++G IY+      +  R     +D EV              PV
Sbjct: 153 LSRAVREVFVRLYEEGLIYRDNRLINWCPRCHTALSDIEVEHEDKAGNLWHIRYPV 208


>gi|115524756|ref|YP_781667.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518703|gb|ABJ06687.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 965

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/339 (19%), Positives = 119/339 (35%), Gaps = 20/339 (5%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +    +WME    +                 P+  + +    E       G   +   
Sbjct: 423 NWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGKVFVAETEEEAVGHALG-YYVEQE 481

Query: 211 RKTFDWGIKIPDDP----------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
             T +    +  DP          + ++  W  +     +T G+ D+    K +++P ++
Sbjct: 482 VITPEQAHDMAVDPIKREGFITRDEDVLDTWFSSALWPFSTLGWPDDDTDVK-RYYPTNV 540

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            V G DI+ F    +         ++P P           KG K+SKS GNVIDP+ +I+
Sbjct: 541 LVTGFDIIFFWVARMMMMGLHFMKDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLHLID 600

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G DALR+ L    A G+D       ++     + A  + N   R   M          
Sbjct: 601 DYGADALRFTLAAMAAQGRDIKLASSRVEG--YRNFATKLWN-ACRFAEMNSCALPTGFD 657

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
              A    +  I     R ++E+ E ++    + A       V     D Y +  KP  L
Sbjct: 658 PTAAKATLNRWIAHETVRAVREVSEAIEAYRFNDAAGSAYRFVWNVYCDWYLELAKP-VL 716

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +    +    +      ++  LL  F+P +  +++ 
Sbjct: 717 MGEDSAAKAETRAMVAWARDEILKLLHPFMPFITEELWS 755



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +  
Sbjct: 50  PYTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQ 109

Query: 66  GVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +               V Q             + +    D S + F  T ++    
Sbjct: 110 LMERQEPSRREMGREKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDEGLSR 167

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++ ++  +G IYK      +  +     +D EV +     +      P++
Sbjct: 168 AVVKVFVQLHREGLIYKAKRLVNWDPKLLTAISDLEVQQIEVRGHLWHLRYPLE 221


>gi|217972285|ref|YP_002357036.1| leucyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782513|sp|B8E4X7|SYL_SHEB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217497420|gb|ACK45613.1| leucyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 859

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  INNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 151 KKTASVNWCPNDETVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++   K+FD     PD    + YV I A 
Sbjct: 207 DTLDGWPDQVKTMQRNWIGRSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 78/320 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 612 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L +  V+      +         T   +++     + + ++ +++  +   + A+
Sbjct: 670 KRLWKLANEHVNQD----NSEALDVSTLTSDQKALRREVHKTIAKVTDDIGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +              P        +  E +  +  LL   +P ++  ++
Sbjct: 726 AAVMELMNHLQK-------------APQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLW 772

Query: 475 DILFVAD--ENRCFQSLDQR 492
           + L  A   E+  +  +D+ 
Sbjct: 773 NELGNASNIEDSQWPVVDEA 792


>gi|229150434|ref|ZP_04278650.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228632927|gb|EEK89540.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 1033

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|78214062|ref|YP_382841.1| valyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78198521|gb|ABB36286.1| valyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 914

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 143/401 (35%), Gaps = 67/401 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E      +P  R  +V     + ++D  +SR+   
Sbjct: 351 PVEPLLSTQWFVKTEPLAARCREALEKQDPRFIPE-RWEKVYRDWLTDIRDWCISRQ-LW 408

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 409 WGHRIPAWFVISETGGKYTDTTPYVVARNEAEALEKAKAAFGAAAEIEQDEDVLDTWFSS 468

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    V G DI+ F    +   A   +  +P       
Sbjct: 469 GLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 528

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK--- 348
                 +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D  K    
Sbjct: 529 GLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKKDTSA 588

Query: 349 --RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  +R   M L          P P A   +D  ILS  +RV +E  E
Sbjct: 589 TVEASRNFANKLWN-ATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLARVSRETAE 647

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIR 456
              +  +  A   +         D Y +  K       NP             V  +VI 
Sbjct: 648 RYSSYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVAKQVLAKVIS 707

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQR 492
           Q+ ++L   +P L  +++  +    E      + + ++D+ 
Sbjct: 708 QMHLMLHPLMPHLTEELWHSVTGEPETTFLALQPWPAVDEA 748



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 36  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTILEK 95

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  +  ++          L  S D     F  T ++   +
Sbjct: 96  QLKEEGKTRHDLGREAFLERAWQWKAESGGRIVGQLRRLGYSVDWKRQRF--TLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|229190296|ref|ZP_04317297.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228593080|gb|EEK50898.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 1033

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 142/360 (39%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPNHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESC---NHQFAPKSIAELRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P     E +   K  + ++ +       G  +   P+ ++ VW D+ +       
Sbjct: 478 STKETP-----EDLELHKPYVDEVQVCCGK--CGGTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++++ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVDKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPKEKYDVKLTKLDEWVLSRLHSTTKKVRTGLDDYQFTNAAREIATL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       EV+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|324326229|gb|ADY21489.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 1033

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/389 (19%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S  V    L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYAKLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|206972102|ref|ZP_03233050.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206733025|gb|EDZ50199.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 1033

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +     
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTKETP-----EDLELHKPYVDEVQVCCGK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKEKYDVKLTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTGLDDYQFTNAAREIATLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T +  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|118589091|ref|ZP_01546498.1| valyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118438420|gb|EAV45054.1| valyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 976

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 110/315 (34%), Gaps = 18/315 (5%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIKIPDDPQYIMYVW 231
              L+  +               + + + G +  + S +      G K+    + ++  W
Sbjct: 488 FNWLNDIQPWCISRQLWWGHQIPVWYDEDGKEYCAHSEEEAVAMAGGKVLTRDEDVLDTW 547

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
             +     +T G+ +       +++  D+ + G DI+ F    W A ++   L    +V 
Sbjct: 548 FSSALWPFSTLGWPNKTP-ELERYYKTDVLITGLDIIFF----WVARMMMQGLHFMDEVP 602

Query: 292 SHGFI------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            H           KG+K+SKS GNVIDP+++I   G DA R+ L  +    +        
Sbjct: 603 FHTVYFNSIVVDGKGKKMSKSTGNVIDPLDLIGRFGADATRFALASQEVQARRM-LRMSD 661

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                    A  + N    +        D   P   + T  +  I +   R + E+   +
Sbjct: 662 QAAEGGQRFATKLWNAARFAEMNGCARADSFDPAATSHT-LNRWIATETGRCITEVTAAL 720

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++   + A   V         D Y +  KP      +    +         + ++  +L 
Sbjct: 721 EDFRFNDACGAVYRFTWNTFCDWYLELAKP-IFNGDDEAAKAETRATAAWALDEILKVLH 779

Query: 464 AFVPKLANKIFDILF 478
             +P L  ++++ L 
Sbjct: 780 PIMPFLTEELWERLG 794



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I       N   H+GHA    + D+L R+ R+ G D L+  GTD  G  +  A +   
Sbjct: 38  FSIVIPPPNVNGSLHMGHALNNTLQDILIRWKRMQGFDTLWQPGTDHAGIALQIAVERQM 97

Query: 67  VTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                               +  +           + +    D S + F  T ++   + 
Sbjct: 98  AERNEPSRTEIGRKAFVERAWRYKGEVGSAIIAQLKRLGASCDWSRERF--TMDEGLSEA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQH 154
            R ++  + ++G IYK      +  + E   +D EV     DG  ++ ++
Sbjct: 156 VRKVFVDLYNEGLIYKSKRLVNWDPKMETAISDLEVENVETDGHMWHFRY 205


>gi|152978421|ref|YP_001344050.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704228|sp|A6VMB8|SYL_ACTSZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150840144|gb|ABR74115.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 860

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TNKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   VL  SYD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAKWTYENIEYMKNQLKVLGFSYDWEREVTTCRPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSVVNWCPNDETVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ PE+   ++           G
Sbjct: 206 LDTLPEWPEMVKTMQRNWIGRSEG 229



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 108/319 (33%), Gaps = 73/319 (22%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKK 289
           Y     +    D  +A +W P D ++ G +    H +Y+  F        L +     KK
Sbjct: 503 YTCPQYHEGMLDSEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGLVSTDEPTKK 562

Query: 290 VFSHGFIL--------------------------HKGE------------------KISK 305
           +   G +L                           KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTKVTLERDEKGRIVKALDDEGRELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++          + NLV   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNLVFEY 680

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
                K+       P A +   +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 681 ----NKNPAKTALNPTALSGVQKALRRGVHKTIAKVSDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            R               DRA     +  E +  +  +L    P +  +++  L   ++  
Sbjct: 737 TR--------ASLAGEQDRA-----IMGEALSAVVRMLYPITPHVCFQLWKELG-NEDVI 782

Query: 485 CFQSLDQRLKPGFMLHKTF 503
            F    Q  +   +  +  
Sbjct: 783 DFAPWVQADEAAMVEEEKL 801


>gi|240949589|ref|ZP_04753924.1| leucyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295847|gb|EER46523.1| leucyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 862

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLNCL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 102/294 (34%), Gaps = 72/294 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++          + NLV   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRVWNLVYEY 680

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
                K    +     + T++ + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 681 A----KSPATVALDVASLTKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +      P E   T  DRA     V  E +  +  +L    P +  +++  L 
Sbjct: 737 TK-----APLE---TEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALG 777


>gi|257464816|ref|ZP_05629187.1| leucyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450476|gb|EEV24519.1| leucyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 862

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLNCL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 102/294 (34%), Gaps = 72/294 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++          + NLV   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRVWNLVYEY 680

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
                ++         A +++ + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 681 A----QNPATAALDVNALSKAQKDLRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +      P E   T  DRA     V  E +  +  +L    P +  +++  L 
Sbjct: 737 TK-----APLE---TEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALG 777


>gi|189083227|sp|A1S8S8|SYL_SHEAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 9/237 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 92  KNATAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V  G           PV+  E   +F +++AY ++LL+  +
Sbjct: 152 KTSAVNWCPNDQTVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDID 207

Query: 182 SHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +   +   ++           G      +  S  +FD     PD    + YV I A 
Sbjct: 208 NLEGWPEQVKTMQRNWIGRSEGVEMTFKVKDSDDSFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 102/319 (31%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPKANEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 551

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 552 VNSNEPAKRLLTQGMVLADAFYYNNEKGARVWVSPLDVTVVEKDDKGRILKAVDTEGHEL 611

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++       A
Sbjct: 612 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEG------A 665

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + +  S              A     +++     + + ++ +++  +   + A+
Sbjct: 666 HRFIKRLWKLASEYSAAPATEALDVSALNADQKTLRRELHKTIAKVTDDLGRRQMFNTAV 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P    +           +  E +  +  LL    P +   ++
Sbjct: 726 AAVMELMNHLQK-----APLASAQDKA--------LMNEALSAVVRLLYPIAPHVCFNLW 772

Query: 475 DILF--VADENRCFQSLDQ 491
             L    A E+  + + D+
Sbjct: 773 RELGNSGAIEDAGWPATDE 791


>gi|254447166|ref|ZP_05060633.1| valyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263305|gb|EDY87583.1| valyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 968

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 136/396 (34%), Gaps = 83/396 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F R        +   ES     +P + +N   S+++  ++D  +SR+   W
Sbjct: 395 IEPLLTDQWFVRAEPLAKPAIEAVESGRIRFVPEQYQNMFFSWMRD-IQDWCISRQ-LWW 452

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 453 GHRIPAWYDEQGGVYVGHSEAEVRREHGLSDDIALQQDDDVLDTWFSSALWPFSTLGWPD 512

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                + K++P  + V G DI+ F     +      +   +P      +       G+K+
Sbjct: 513 QTAALE-KWYPTSVLVTGFDIIFFWVARMMMMGLHFMDGEVPFKDVYITGLVRDENGDKM 571

Query: 304 SKSLGNVIDPIEVIEE-------------------------------------VGVDALR 326
           SKS GNV+DP+++I+                                       G DALR
Sbjct: 572 SKSKGNVLDPLDLIDGIDLDALVEKRTQGLMQPQMAKKIEAATRKSFPNGIPAFGTDALR 631

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FT 384
           + L    + G+D  +D   ++     +  N + N  SR V M  +D D       A   +
Sbjct: 632 FTLASLASTGRDIKFDLSRMEG--YRNFCNKLWN-ASRFVLMNTQDQDTGADDNAAVELS 688

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-- 440
            +D  I+S   +V  E+  +M+      A  ++         D Y +  KP  L      
Sbjct: 689 LADRWIVSRLQQVEAEVSRHMETYRFDLASKEIYEFTWHDYCDWYIELAKP-VLNNDQAS 747

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++        V V+  L  L    +P +  +I+  
Sbjct: 748 AEQQRGTRRTLVRVLEALLRLAHPTMPFITEEIWQQ 783



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
              +  PN     H+GHA++  I D L R++R+ G + L+  GTD  G       +    
Sbjct: 58  CIMLPPPNVTGTLHMGHAFQQTIMDALTRYYRMKGHNTLWQPGTDHAGIATQMVVERQLA 117

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      A    KV+  +       +R  R M    D   + F  T +        
Sbjct: 118 AEGQNRHDLGRAPFLEKVWEWKEQSGGTITRQMRRMGTSPDWQRERF--TMDDGLSKAVS 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  +G +Y+G     +  +     +D EV    +         P+
Sbjct: 176 DTFVRLYKEGLLYRGKRLVNWDPKLHTAISDLEVENKDEKGKLWQFRYPL 225


>gi|119775714|ref|YP_928454.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119768214|gb|ABM00785.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 864

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 9/237 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 37  KEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDAFGLPAENAAI 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +YK
Sbjct: 97  KNATAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V  G           PV+  E   +F +++AY ++LL+  +
Sbjct: 157 KTSAVNWCPNDQTVLANEQVQDG----CCWRCDTPVEQKEIPQWFIKITAYAEELLNDID 212

Query: 182 SHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +   +   ++           G      +  S  +FD     PD    + YV I A 
Sbjct: 213 NLEGWPEQVKTMQRNWIGRSEGVEMTFKVKDSDDSFDIYTTRPDTVMGVTYVAIAAG 269



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 102/319 (31%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 497 FMESSWYYARYCSPKANEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 556

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 557 VNSNEPAKRLLTQGMVLADAFYYNNEKGARVWVSPLDVTVVEKDDKGRILKAVDTEGHEL 616

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++       A
Sbjct: 617 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEG------A 670

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + +  S              A     +++     + + ++ +++  +   + A+
Sbjct: 671 HRFIKRLWKLASEYSAAPATEALDVSALNADQKTLRRELHKTIAKVTDDLGRRQMFNTAV 730

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P    +           +  E +  +  LL    P +   ++
Sbjct: 731 AAVMELMNHLQK-----APLASAQDKA--------LMNEALSAVVRLLYPIAPHVCFNLW 777

Query: 475 DILF--VADENRCFQSLDQ 491
             L    A E+  + + D+
Sbjct: 778 RELGNSGAIEDAGWPATDE 796


>gi|114561888|ref|YP_749401.1| leucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114333181|gb|ABI70563.1| leucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 872

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 39  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + ++  KG +
Sbjct: 99  AINNKASPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTQLYAKGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V   E   +F +++ Y ++LL+ 
Sbjct: 159 YKKTSSVNWCPNDETVLANEQVQDG----CCWRCDTEVIQKEIPQWFIKITDYAEELLND 214

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G+     ++ S  +FD     PD    + YV I A 
Sbjct: 215 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFAVADSDASFDIYTTRPDTLMGVTYVAIAAG 273



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 100/319 (31%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 505 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 564

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 565 VNSDEPAKQLLTQGMVLADAYYYTNEKGARVWVSPLEVTVVEKDDKGRIIKAIDNQGHEL 624

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 625 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 682

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
                L S  V                     +++     + + ++ +++  +   + A+
Sbjct: 683 KRFWKLASDHV----AAGKTEALDTSKLNADQKALRRELHKTIAKVSDDIARRQMFNTAV 738

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++             L K + + A     +  E +  +  LL   VP +   ++
Sbjct: 739 ASVMELMNH------------LLKASQETAQD-RALLAEALSAVTRLLYPIVPHMTFTLW 785

Query: 475 DILFVAD--ENRCFQSLDQ 491
           + L      E+  +  +D+
Sbjct: 786 NELGNEGDIEDSRWPEVDE 804


>gi|319405909|emb|CBI79541.1| Valyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 907

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 12/328 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E+ YF  +   Q   +S        I      + +I   K+  + L  +   +   +++ 
Sbjct: 414 EKTYFNWMQNIQPWCISRQLWWGHQIPAWYGPDGMIFVEKNEKEALDSALSYYGKTVQLT 473

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     +T G+ D        F+P  L V G DI+ F    +      
Sbjct: 474 RDQD-VLDTWFSSALWPFSTLGWPDKTI-ELTTFYPTSLSVTGFDIIFFWVARMMMMGMH 531

Query: 280 LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               +P P  V+ H  +  + G K+SKS GN++DP+E+I++ G DALR+ L    A G+D
Sbjct: 532 FMGEVPFPT-VYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMAAQGRD 590

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
              D   +      +    + N  +R   M    +D            +  IL+  S+ +
Sbjct: 591 VKLDPSRVAG--YRNFVTKLWN-ATRFAEMNGVRHDLSFKPEKTKLAINRWILTELSKTV 647

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
             + + ++N   + A   +   +     D Y +  KP   + ++ D        T  V+ 
Sbjct: 648 SAVTKGIENYKFNDAAQALYRFIWHALCDWYLELLKP-IFQGSDEDSKKEAQACTAWVLD 706

Query: 457 QLAILLQAFVPKLANKIFDILFVADENR 484
           ++  LL  F+P +  +++ +  + D  R
Sbjct: 707 EVYKLLHPFMPHVTEELWSLTAMQDLKR 734



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 19/175 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +           H+GHA    I D++ RF R+ G +VL+  G D  G       
Sbjct: 34  DAETFCVMLPPPNVTGSLHMGHALNTTIQDIIVRFQRMQGKNVLWQPGMDHAGIATQMVV 93

Query: 63  QNAGVTTKV----------FVDQNSRNFRD-------MADVLDISYD--DFIRTTEKRHH 103
           +      +           F+++  +   +           L +S D      T ++   
Sbjct: 94  ERQLAERQEPARQEMGREKFIERVWKWRHEAGGIITNQLKRLGVSCDWSRERFTMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  +  +G IYK      +  +     +D EV       Y      P++
Sbjct: 154 QAVREVFVTLYKQGLIYKDKRLVNWDPKLLTAISDLEVELKEVKGYLWYFRYPLE 208


>gi|88809487|ref|ZP_01124995.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786706|gb|EAR17865.1| valyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 979

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 141/410 (34%), Gaps = 70/410 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E      +P  R  +V     + ++D  +SR+   
Sbjct: 416 PVEPLLSTQWFVKTEPLAARCREALEKQDPRFIPE-RWEKVYRDWLTDIRDWCISRQ-LW 473

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 474 WGHRIPAWFVISETGGQYTDTTPYVVARNEAEALEKAKAEYGAAAEIEQDEDVLDTWFSS 533

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    V G DI+ F    +   A   +  +P       
Sbjct: 534 GLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 593

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG-LKKRV 350
                 +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D       
Sbjct: 594 GLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKTDTSA 653

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT------PGAFTESDESILSVCSRVLQEIREN 404
             + +    N +  +    L +  G  P       P A   +D  ILS  +RV +E  E 
Sbjct: 654 TVEASRNFANKLWNATRFALMNLGGETPAQLGEPIPEALQLADRWILSRLARVNRETAER 713

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIRQ 457
             +  +  A   +         D Y +  K       NP             V  +VI Q
Sbjct: 714 YSSYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVAKQVLAKVISQ 773

Query: 458 LAILLQAFVPKLANKIFDILFVADEN----------RCFQSLDQRLKPGF 497
           + ++L   +P L  +++  +    E           R   +LD  L+  F
Sbjct: 774 MHLMLHPLMPHLTEELWHSVTGEPETSFLALQSWPARDESALDDALEASF 823



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 101 EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTILEK 160

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  +  ++          L  S D     F  T ++   +
Sbjct: 161 QLKEEGKTRHDLGRDAFLERAWQWKAESGGRIVGQLRRLGYSVDWKRQRF--TLDEGLSE 218

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 219 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 269


>gi|302519062|ref|ZP_07271404.1| valyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427957|gb|EFK99772.1| valyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 873

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/358 (19%), Positives = 123/358 (34%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E   +        L D  
Sbjct: 353 HCSRCGTAVEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPQE-MEKRYFDWVDNLHDWC 411

Query: 209 LSRKTFDWGIKI------------------------PDDPQYIMYVWIDALTNYLTTTGY 244
           +SR+   WG +I                              ++  W  +     +T G+
Sbjct: 412 ISRQ-LWWGHRIPVWYGPAGEIVCVGPGEEPPSGEGWHQETDVLDTWFSSGLWPFSTLGW 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  D S AKF+P    V G DIL F     + +  + +    P  + V         G+
Sbjct: 471 PEQTD-SVAKFYPNSTLVTGYDILFFWVARMMMFGLYAMDGTPPFSEIVLHGMVRDQNGK 529

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++ +++ G DALR+ L R    G D    ++ ++   N    N + N 
Sbjct: 530 KMSKSFGNAVDPLDWMDKYGSDALRFTLARGANPGVDVPIGEEWIQGSRN--FTNKLWN- 586

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS    V  +      +    +    +    
Sbjct: 587 ATRFALMNGATVEGALPPAERLSATDRWILSRLGEVTAQADALYDDYQFAKLSDLLFHFA 646

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K        P  A     V  EV+     LL   VP +   ++  L
Sbjct: 647 WDEVFDWYVELSKSVFQAAGRP--AEDARRVLGEVLDVTLRLLHPIVPFVTETLWTTL 702



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 44  SEKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGFETLWQPGMDHAGIATQNK 103

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + F  +     R + D +D S + F  T ++ 
Sbjct: 104 VEQQLAGEGKSRHDLGREAFIARVWQWKEEFGGKILGQMRRLGDGVDWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 162 LSQAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 206


>gi|251793862|ref|YP_003008594.1| leucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535261|gb|ACS98507.1| leucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 862

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMKGKNVLQPFGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +           +D  I T +  ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIAYMKKQLQILGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLNCL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   ++           G
Sbjct: 207 DDLPQWPDQVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 100/297 (33%), Gaps = 72/297 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          +  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQQGMLNSEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGLVNSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTKVTLERDEKGRIVKAVDDEGHELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLARVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    K+       P A + S +++     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VFEYNKNPTKTAVNPTALSASQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R      P        DRA     +  E +  +  +L    P +  +++  L   D
Sbjct: 737 TR-----AP---LDDEQDRA-----IMAEALSAVVRMLYPITPHICFRLWQELGNQD 780


>gi|192291231|ref|YP_001991836.1| valyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192284980|gb|ACF01361.1| valyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 957

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D       +++P ++ V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDETP-ELDRYYPTNVLVTGFDIIFFWVARMMMMGLHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D   
Sbjct: 551 DDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLNLIDEYGADALRFTLAAMAAQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N   R   M             A    +  I     R ++E+
Sbjct: 611 ATSRVEG--YRNFATKLWN-ACRFAEMNGCVAPVGFDYTAAKETLNRWIAHETVRAVREV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E +++   + A       V     D Y +  KP  L        +    +      ++ 
Sbjct: 668 TEAIESYRFNDAAEAAYRFVWNVYCDWYLELAKP-VLMGEEGAAKTETRAMVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+P +  +++
Sbjct: 727 KILHPFMPFITEELW 741



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 23/174 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +  
Sbjct: 37  PYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQ 96

Query: 66  GVTTKV-------------FVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +               V Q             + +    D S + F  T ++    
Sbjct: 97  LMERQEPSRRDMGRAKFLGRVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDEGLSR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++ ++  +G IYK      +  +     +D EV +            P++
Sbjct: 155 AVAKVFVELHRQGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGNLWHLRYPIE 208


>gi|301154877|emb|CBW14340.1| leucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 862

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   Y  D  I T    ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIEYMKNQLKMLGFGYDWDREIATCSPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P++   ++           G
Sbjct: 206 LDQLPQWPDMVKTMQRNWIGRSEG 229



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 76/181 (41%), Gaps = 26/181 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++         G    
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRF 669

Query: 362 VSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           + R  +++ +       T     A +   +++     + + ++ +++  +   + A+A V
Sbjct: 670 LGRVWNLVYEYSQNPAKTALDVTALSADQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAV 729

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++++ R      P     +  DRA     V  E +  +  +L    P +  +++  L
Sbjct: 730 MELMNKLTR-----AP---LDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWKAL 776

Query: 478 F 478
            
Sbjct: 777 G 777


>gi|153009571|ref|YP_001370786.1| valyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561459|gb|ABS14957.1| valyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 910

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/351 (21%), Positives = 131/351 (37%), Gaps = 18/351 (5%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y N  E+ K A       +   V    E+ YF  +   Q   +S        I    
Sbjct: 384 DQWYVNAGELAKPAMAAVREGKTKIVPTNWEKTYFDWMENIQPWAVSRQLWWGHQIPAWY 443

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
             +      KS  +  + +R  +   + +  D   ++  W  +     +T G+ D     
Sbjct: 444 GPDGQYFVEKSEEEAKAAARAHYGEDVALERDTD-VLDTWFSSALWPFSTLGWPDKTP-E 501

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISK 305
            A ++P  + V G DIL F    W A ++   L    ++  H   LH       G K+SK
Sbjct: 502 LATYYPTSVLVTGFDILFF----WVARMMMMGLHFMDEIPFHTVYLHALVRDKHGAKMSK 557

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNVIDP+E+++E G DALR+ L    A G+D   D   +      +    + N  +R 
Sbjct: 558 SKGNVIDPLELMDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRF 614

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
             M     D       A    +  IL+  ++  + + E +     + A       V    
Sbjct: 615 AQMNGVKLDAGFKPENAKLAVNRWILTELTKATRAVTEGIDTYRFNEAAGAAYRFVWNQF 674

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            D Y +  KP      +    +         + Q+  LL  F+P +  +++
Sbjct: 675 CDWYLELLKP-IFMGDDEAAKAEAQATAAYCLDQVYKLLHPFMPFMTEELW 724



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  ---AGVTTKVFVDQNSRNFRDMADV------------------LDISYDDFIRTTEKRHH 103
                           +    +                      D S + F  T ++   
Sbjct: 96  QLAERQEPNRHTMGREKFIERVWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVSLYKQGLIYRDKRLVNWDPKLLTAISDIEVESRETKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|71027023|ref|XP_763155.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350108|gb|EAN30872.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 691

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 88/244 (36%), Positives = 138/244 (56%), Gaps = 4/244 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++++AIAY N  PH+GHAYE +I DV++R++R+ G  V+F+TGTDEHG K+  
Sbjct: 93  LENKKPYHLASAIAYTNGLPHVGHAYEAVICDVISRYYRMFGRRVIFSTGTDEHGIKVLT 152

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T     D  S  F+   + L + YD FIRTT + H    + +W+ +  KGDIY
Sbjct: 153 TAKQQNKTPIEVCDYYSNEFKKFYERLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIY 212

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+R+E +  + E               P   M E  YFF +  Y+  L+ Y 
Sbjct: 213 LGEYNGYYSMREERFIPNTEAKLTD--FKDPVSGKPYDLMSESSYFFTMERYRTPLVEYI 270

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM--YVWIDALTNY 238
            ++ +FI P + RNE+++ +K  L DLS+SR +FDWGI++P     ++  YV  D    Y
Sbjct: 271 STNQDFIYPKKVRNEILTRLKDQLDDLSISRTSFDWGIEVPSTDDIVITEYVNNDVNLGY 330

Query: 239 LTTT 242
               
Sbjct: 331 NHDN 334



 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 83/273 (30%), Positives = 143/273 (52%), Gaps = 15/273 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K  +  +++MYVW DAL+ Y+T++G       S+  +WP DL VIGKDI  F ++     
Sbjct: 398 KKTEREKHVMYVWFDALSFYMTSSG--LGESLSEMTYWPTDLQVIGKDISWFQSVILATM 455

Query: 279 LLSANLPLPKKVFSH-GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             S  LPL +K+ +H       G K+SKSLGNV++  E+++EVGV++ RY+L++    G 
Sbjct: 456 CFSMGLPLTRKILAHGFIQGSDGRKMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVMGS 515

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCS 395
           D  +D++ LK+  N+DLA+ +GNLV R  S++ K  +G++P       +  D        
Sbjct: 516 DVNFDQNQLKEMHNSDLADNVGNLVHRLTSLVTKYNEGVLPSYKSKVKSPFD------FV 569

Query: 396 RVLQEIRENMQNQLIHRALAQV-ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             ++E  + +    I+  L    +    +++ Y     PW   + N D+  +VL V +E 
Sbjct: 570 EFMKECSDYVLKLDIYNVLMLTNMKF-KDLNNYLTVTTPW--AEKNQDKRDSVLRVLLES 626

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  LA  L   +P+   ++F  L    +   ++
Sbjct: 627 VYFLAHFLYPVLPQSMERLFLKLGTPKKQNVWE 659


>gi|158424439|ref|YP_001525731.1| valyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158331328|dbj|BAF88813.1| Valyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 926

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 118/376 (31%), Gaps = 63/376 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L+         +P         +++  ++   +SR+   W
Sbjct: 376 IEPWLTDQWYVDAKTLAQPALAAVREGRTTFVPKNWEKTYFEWLE-NIQPWCVSRQ-LWW 433

Query: 217 G--IKIPDDP-------------------------------------------------Q 225
           G  I    DP                                                 +
Sbjct: 434 GHQIPAWYDPFGNVFVELDEDAAFEAAIAKNVAAENLTPDEAQALIDDADKRAQFLTRDE 493

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSA 282
            ++  W  +     +T G+ D     K KF+P  + V G DI+ F     +      +  
Sbjct: 494 DVLDTWFSSALWPFSTMGWPDETAELK-KFYPTSVLVTGFDIIFFWVARMMMMGLEFMDG 552

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P             KG K+SKS GNVIDP+++I + G DALR+ L    A G+D    
Sbjct: 553 EVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLINQYGADALRFTLAAMAAQGRDIKLA 612

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              ++     + A  + N  +R   M                  +  IL   +R   E+ 
Sbjct: 613 TSRVEG--YRNFATKLWN-ATRFAEMNGCVRAEGFDPAKVNGTLNRWILGEATRAANEVT 669

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             ++    + A       +     D + +  KP  L   +          T  V+     
Sbjct: 670 AAIEAYRFNEAAGAAYRFIWNVLCDWHLELAKP-VLSGPDGAAKDETRATTAFVLDVALS 728

Query: 461 LLQAFVPKLANKIFDI 476
           LL  F+P L  +++  
Sbjct: 729 LLHPFMPFLTEELWAR 744



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 57/177 (32%), Gaps = 23/177 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +     I           H+GHA    + D+LARF R+ G DVL+  GTD  G       
Sbjct: 34  DAPGFSIVIPPPNVTGSLHMGHALNNTLQDILARFERMRGKDVLWQPGTDHAGIATQMVV 93

Query: 63  QNAGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
           +   +  K                +  +           + +    D S + F  T ++ 
Sbjct: 94  ERQLMERKEPGRRDMGRAAFVERVWAWKAESGGTIVNQLKRLGASCDWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                  ++  +  KG IYK      +  +     +D EV +            PV+
Sbjct: 152 LSRAVLKVFVDLHRKGLIYKDKRLVNWDPKLLTAISDLEVQQVEVKGNLWHLRYPVE 208


>gi|117927949|ref|YP_872500.1| valyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648412|gb|ABK52514.1| valyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 888

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 129/368 (35%), Gaps = 45/368 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++      +F ++ +               I P E       +V   + D  
Sbjct: 347 HCSRCDTVIEPRLSLQWFVKVESLAKAAGDAVRDGRVVIHPPEMARMYFDWVD-NMHDWC 405

Query: 209 LSRKTFDWGIKI------------------------PDDPQYIMYVWIDALTNYLTTTGY 244
           +SR+   WG +I                            + ++  W  +     +T G+
Sbjct: 406 ISRQ-LWWGHRIPVWYGPGGEMVVVGPDETPPAGDGWHQDEDVLDTWFSSALWPFSTLGW 464

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI 296
            +      AKF+P  + V G DI+ F       F L A         +P      +    
Sbjct: 465 PEETA-DLAKFYPTSVLVTGYDIIFFWVARMMMFGLYAMKHRGPRDAVPFRIVALTGLIR 523

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKS GN IDPI+ I+  G DA R+ L+R  + G D     +  +   N    N
Sbjct: 524 DERGRKMSKSAGNGIDPIDWIDRYGADATRFTLLRNASPGTDVSVGDEWAQASRN--FVN 581

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N    +  M+              T +D  ILS    V++++   +      +A   
Sbjct: 582 KIWNAARFA--MLNGATTQGPIPVDELTTADRWILSRLGSVVRDVDAFLDAFEFAKACDT 639

Query: 417 VISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +     +   D Y +  K P  L++   D A T   +   V+  L  L    +P +  ++
Sbjct: 640 LFHFTWDEFCDWYVELSKLP--LERGGADAART-RRILGHVLDVLLRLWHPIIPFVTEEL 696

Query: 474 FDILFVAD 481
           +  L  A+
Sbjct: 697 WTTLTGAE 704



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R    I         Q H+GHA    + DVL R  R+ G + L+  G D  G      
Sbjct: 42  SSRPAYCIVLPPPNVTGQLHMGHALNHSLMDVLTRRRRMQGYETLWLPGMDHAGIATQNV 101

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                            +  +     R + + +D + + F  T +  
Sbjct: 102 VERELAREGISRHDLGREKFVERVWQWKAEYGGKILDQMRRLGEGVDWTRERF--TMDDG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + +++++   G IY+      +  R     +D EV    D
Sbjct: 160 LSRAVQEIFRRLYADGLIYRAERIINWCPRCLTALSDIEVEHSDD 204


>gi|301165609|emb|CBW25180.1| valyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 888

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/383 (18%), Positives = 139/383 (36%), Gaps = 24/383 (6%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEEEGYFFR 168
           +     G   +        +  + + N  ++ K A     N + N  P QW      + R
Sbjct: 343 EHTHQVGHGDRSKSVIEPMVSKQWFLNVQDMSKQALECVENGETNFFPKQWENTYFSWLR 402

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                      +  H   +      +   +      K    S +       +  DP  ++
Sbjct: 403 EPKNWCLSRQLWWGHQIPVFNCSDCSHQWASEVDETKCSKCSSEN------VTQDPD-VL 455

Query: 229 YVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
             W  +    ++T G+ +     +    KF+P    V G DI+ F    +   +  ++  
Sbjct: 456 DTWFSSGLWPMSTLGWPNPERMKERGYDKFFPTTCLVTGFDIIFFWVARMMMMSLKVTGE 515

Query: 284 LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P    ++ H  +  K G K+SKSLGN +DP+E +EE G DA R+ L       +    D
Sbjct: 516 KPFSD-IYIHALVRDKLGRKMSKSLGNGLDPLETVEEYGADAFRFTLAAGSGYNRGLNLD 574

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            + +      +  N I N        + K     I  P    + ++ I+S  + V + + 
Sbjct: 575 PERIAG--YRNFINKIWNAFRFISPFLEKG---DITLPKNLDQQEKWIISELNEVTKVMN 629

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++M+      + A + + V +     + +  K   L   + + A     V     RQ+  
Sbjct: 630 DSMEEYRFDDSCAAIYAFVYDKFCSWFIELSK-NILHGEDQEAAQRRSTVLKYTFRQIVT 688

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
           LL    P +  +++  L  ++E+
Sbjct: 689 LLHPITPFITEELWSYLKDSEED 711



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I         + H GHA ++   D L R+ R+ G + L+  G D  G      
Sbjct: 38  KTGESYCIIMPPPNVTGRLHAGHALDVTNQDTLIRWKRMKGFEALWLPGMDHAGIATQSV 97

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                         + ++           +  S  +D  + T +   
Sbjct: 98  VEKQVQAEEGKTRHDFSREEFLEKIWKWKEEYGGIIAQQQKTMGASPDWDYSMFTMDPEA 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++  R ++  + ++G IY+  Y   +    ++  +D EV  
Sbjct: 158 NEAVRKVFVMLYNEGLIYQSDYIINWDTVLQSAISDAEVEH 198


>gi|301053711|ref|YP_003791922.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300375880|gb|ADK04784.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 1033

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H          +E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKET-----SEDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|39935649|ref|NP_947925.1| valyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562628|sp|Q6N6N1|SYV_RHOPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39649502|emb|CAE28024.1| valyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 957

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D       +++P ++ V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDETP-ELDRYYPTNVLVTGFDIIFFWVARMMMMGLHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D   
Sbjct: 551 DDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLNLIDEYGADALRFTLAAMAAQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N   R   M             A    +  I     R ++E+
Sbjct: 611 ATSRVEG--YRNFATKLWN-ACRFAEMNGCVAPAGFDYTAAKETLNRWIAHETVRAVREV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E +++   + A       V     D Y +  KP  L        +    +      ++ 
Sbjct: 668 TEAIESYRFNDAAEAAYRFVWNVYCDWYLELAKP-VLMGEEGAAKTETRAMVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+P +  +++
Sbjct: 727 KILHPFMPFITEELW 741



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 23/174 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +  
Sbjct: 37  PYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQ 96

Query: 66  GVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +               V Q             + +    D S + F  T ++    
Sbjct: 97  LMERQEPSRRDMGRAKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDEGLSR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++ ++  +G IYK      +  +     +D EV +            P++
Sbjct: 155 AVAKVFVELHRQGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGNLWHLRYPIE 208


>gi|227821920|ref|YP_002825890.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340919|gb|ACP25137.1| valyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 947

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 131/367 (35%), Gaps = 37/367 (10%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                 +     +   + +      +     H    W   +G  F     ++ L +  + 
Sbjct: 419 TTFVPRNWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGQVFVEKTEEEALHAAIQH 478

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +     P++   E +              + F  G  +  D   ++  W  +     +T 
Sbjct: 479 YIAHEGPMKAYVEDLL-------------ENFKPGEILTRDED-VLDTWFSSALWPFSTL 524

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VF 291
           G+         K++  D+ V G DI+ F    W A ++   L   K            V+
Sbjct: 525 GWPTETP-ELEKYYQTDVLVTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVY 579

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A G+D   D   +    
Sbjct: 580 VHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG-- 637

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             +    + N  +R   M             A    +  IL+  SR ++++ E ++    
Sbjct: 638 YRNFGTKLWN-ATRFAEMNGATSSDGFIPEAASLTVNRWILTELSRTIRDVTEAVEGYRF 696

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           + A   +   +     D Y +  KP      +             V+ +   LL  F+P 
Sbjct: 697 NDAAGSLYRFIWNQFCDWYLELLKP-VFGGEDEAAKRESQACVAYVLDETYKLLHPFMPF 755

Query: 469 LANKIFD 475
           +  +++D
Sbjct: 756 MTEELWD 762



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 23/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   +           H+GHA    + DV+ RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFCVVIPPPNVTGSLHMGHALNNTLQDVMVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +           + +    D S + F  T ++   
Sbjct: 96  QLAQRKLPGRREMGREAFIDKVWEWKGESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +    ++  +  +G IY+      +  + +   +D EV +     +      P++
Sbjct: 154 EAVIEVFVSLYKEGLIYRDTRLVNWDPKLQTAISDIEVEQVEVNGHLWHLRYPLE 208


>gi|90419373|ref|ZP_01227283.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336310|gb|EAS50051.1| valyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 947

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 17/262 (6%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +     +T G+ D      A ++P  + V G DI+ F    W A ++ 
Sbjct: 515 HRDEDVLDTWFSSALWPFSTLGWPDQTP-ELATYYPTSVLVTGFDIIFF----WVARMMM 569

Query: 282 ANLPLPKK-----VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L    +     V+ H  +  K G K+SKS GNV+DP+++I+E G DALR+ L    A 
Sbjct: 570 MGLEFMDEEPFHTVYVHALVRDKTGAKMSKSKGNVVDPLDLIDEFGADALRFTLAIMAAQ 629

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   D   +      +    + N  +R   M    + G +         +  I++   
Sbjct: 630 GRDVKLDPQRIAG--YRNFGTKLWN-ATRFAEMNGAVHGGTLDPSQLSLPLNRWIVTELG 686

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R + E    +     + A A +   V     D Y +  KP  L  ++   A+ V +V   
Sbjct: 687 RTIAETETAIAAYRFNEAAATLYRFVWNLFCDWYVELAKP-ALMGSDEAAANEVRHVMGS 745

Query: 454 VIRQLAILLQAFVPKLANKIFD 475
           V+ ++  LL  F+P +  +++ 
Sbjct: 746 VLDRIYALLHPFMPFITEELWQ 767



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 23/146 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA    + DVL RF R+ G  VL+  G D  G       +   
Sbjct: 38  FSIVIPPPNVTGSLHMGHALNDTLQDVLVRFERMRGKKVLWQPGLDHAGIATQMVVERQL 97

Query: 67  VTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
              K           F+++  +             R +    D S + F  T ++     
Sbjct: 98  AERKEPGRRDMGRDAFIERVWQWKGESGGAILGQLRRLGASCDWSRERF--TMDEGLSKA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
              ++ ++  KG IYK      +  +
Sbjct: 156 VLHVFVELYRKGLIYKDKRLVNWDPK 181


>gi|318060128|ref|ZP_07978851.1| valyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318076386|ref|ZP_07983718.1| valyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 841

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/358 (19%), Positives = 123/358 (34%), Gaps = 37/358 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E   +        L D  
Sbjct: 321 HCSRCGTAVEPRLSMQWWVKVGPLAKAAGDAVRDGRVKIHPQE-MEKRYFDWVDNLHDWC 379

Query: 209 LSRKTFDWGIKI------------------------PDDPQYIMYVWIDALTNYLTTTGY 244
           +SR+   WG +I                              ++  W  +     +T G+
Sbjct: 380 ISRQ-LWWGHRIPVWYGPAGEIVCVGPGEEPPSGEGWHQETDVLDTWFSSGLWPFSTLGW 438

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            +  D S AKF+P    V G DIL F     + +  + +    P  + V         G+
Sbjct: 439 PEQTD-SVAKFYPNSTLVTGYDILFFWVARMMMFGLYAMDGTPPFSEIVLHGMVRDQNGK 497

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++ +++ G DALR+ L R    G D    ++ ++   N    N + N 
Sbjct: 498 KMSKSFGNAVDPLDWMDKYGSDALRFTLARGANPGVDVPIGEEWVQGSRN--FTNKLWN- 554

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +R   M     +G +P     + +D  ILS    V  +      +    +    +    
Sbjct: 555 ATRFALMNGATVEGALPPAERLSATDRWILSRLGEVTAQADALYDDYQFAKLSDLLFHFA 614

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K        P  A     V  EV+     LL   VP +   ++  L
Sbjct: 615 WDEVFDWYVELSKSVFQAAGRP--AEDARRVLGEVLDVTLRLLHPIVPFVTETLWTTL 670



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+E  + D L R  R+ G + L+  G D  G      
Sbjct: 12  SEKPPYTIVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGFETLWQPGMDHAGIATQNK 71

Query: 62  AQNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                          + F  +     R + D +D S + F  T ++ 
Sbjct: 72  VEQQLAGEGKSRHDLGREAFIARVWQWKEEFGGKILGQMRRLGDGVDWSRERF--TMDEG 129

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++KK+ D   IY+      +  R     +D EV    D
Sbjct: 130 LSQAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDD 174


>gi|189083232|sp|Q087K2|SYL_SHEFN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 863

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N   +   +  +N    ++   +L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AINNKASPAPWTYENIDYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTQLYAKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V   E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVQDG----CCWRCDTEVIQKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G+     ++ S  +FD     PD    + YV I A 
Sbjct: 206 IDTLDGWPEQVKAMQRNWIGRSEGIEMTFAVADSDASFDIYTTRPDTLMGVTYVAIAAG 264



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 100/319 (31%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 496 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGL 555

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 556 VNSDEPAKQLLTQGMVLADAYYYTNEKGARVWVSPLEVTVVEKDDKGRIIKAIDNQGHEL 615

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++E+ G D +R F++          + + G++        
Sbjct: 616 VYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHR--FI 673

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
                L S  V                     +++     + + ++ +++  +   + A+
Sbjct: 674 KRFWKLASDHV----AAGKTEALDTSKLNADQKALRRELHKTIAKVSDDIARRQMFNTAV 729

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++             L K + + A     +  E +  +  LL   VP +   ++
Sbjct: 730 ASVMELMNH------------LLKASQETAQD-RALLAEALSAVTRLLYPIVPHMTFTLW 776

Query: 475 DILFVAD--ENRCFQSLDQ 491
           + L      E+  +  +D+
Sbjct: 777 NELGNEGDIEDSRWPEVDE 795


>gi|167625140|ref|YP_001675434.1| leucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167355162|gb|ABZ77775.1| leucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 868

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     AA
Sbjct: 40  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 100 IKNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 160 KKTSSVNWCPNDETVLANEQVIDG----CCWRCDTTVEQKEIPQWFIKITEYAEELLNDL 215

Query: 181 ESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +   E+   ++           G+     ++ S ++FD     PD    + YV I A 
Sbjct: 216 DQLDEWPEQVKTMQRNWIGRSEGIEMTFQVADSDQSFDIYTTRPDTVMGVTYVAIAAG 273



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 107/319 (33%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y                KA +W P D ++ G +    H +Y+  F        L
Sbjct: 501 FMESSWYYARYCSPHADQMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDSGL 560

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 561 VNSDEPAKRLLTQGMVLADAYYYNNEKGARVWVAPSDVTVLETDDKGRTVKAVDSEGNEL 620

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++       A
Sbjct: 621 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAAPPELTLEWQESSVEG------A 674

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + ++    +           +   + + +     + + ++ ++++ +   + A+
Sbjct: 675 HRFIKRLWKTAHDHIATGPTAELDVKSLNAAQKELRRELHKTIAKVGDDIERRQMFNTAI 734

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P    +T  D+A     +  E +  +  LL   +P     ++
Sbjct: 735 ASVMELMNRLQK-----AP---SETEQDKA-----LMQEALNAVVRLLYPIIPHTCFVLW 781

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    A E+  +  +D+
Sbjct: 782 NDLGNQGAIEDVLWPEVDE 800


>gi|260435463|ref|ZP_05789433.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413337|gb|EEX06633.1| valyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 914

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/399 (20%), Positives = 141/399 (35%), Gaps = 65/399 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E H    +P  R  +V     + ++D  +SR+   
Sbjct: 351 PVEPLLSTQWFVKTEPLAARCREALEKHDPRFIP-GRWEKVYRDWLTDIRDWCISRQ-LW 408

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 409 WGHRIPAWFVISETGGTYTDTTPYVVARNEAEALAKAKAEYGAAAEIEQDEDVLDTWFSS 468

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P    V G DI+ F    +   A   +  +P       
Sbjct: 469 GLWPFSTLGWPDADSADLQRWYPTSTLVTGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 528

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-RV 350
                 +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D  K    
Sbjct: 529 GLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKKDTSA 588

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIREN 404
             + +    N +  +    L +     P       P A   +D  ILS  +RV +E  + 
Sbjct: 589 TVEASRNFANKLWNATRFALMNLGSETPTQLGESDPAALQLADRWILSRLARVNRETAQR 648

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIRQ 457
             +  +  A   +         D Y +  K       NP             V  +VI Q
Sbjct: 649 YSSYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVAKQVLAKVISQ 708

Query: 458 LAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQ 491
           + ++L   +P L  +++  +    E      + + +LD+
Sbjct: 709 MHLMLHPLMPHLTEELWHSVTGEPETTFLALQPWPALDE 747



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 36  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTILEK 95

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
                                  +  ++          L  S D     F  T ++   +
Sbjct: 96  QLKQEGKTRHDLGRDAFLERAWDWKAESGGRIVGQLRRLGYSVDWKRQRF--TLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|256830217|ref|YP_003158945.1| valyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579393|gb|ACU90529.1| valyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 887

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/374 (20%), Positives = 138/374 (36%), Gaps = 40/374 (10%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E                ++    E +F  +    +K  +  E     I P +  N+    
Sbjct: 342 EEPYENKVNQCYRCKTNIEPFVSEQWFVSVKPLAEKARAAVEDGRTTIWPAQW-NKTYFN 400

Query: 200 VKSGLKDLSLSRKTFDWGIKIP--------------DDP-------------QYIMYVWI 232
               ++D  +SR+   WG +IP              +DP             + ++  W 
Sbjct: 401 WLDNIRDWCISRQ-LWWGHRIPVWTCQDCGELIVAREDPTACACGSTRLLQDEDVLDTWF 459

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ +  +  KA F+P  L V G DIL F    +         N+P  K V
Sbjct: 460 SSALWPFSTMGWPEQTNELKA-FYPTSLLVTGFDILFFWVARMMMMGLQFMDNVPF-KDV 517

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + H  +  + G+K+SKS GNVIDP+ +I++ G D+LR+ L    A G+D    +  ++  
Sbjct: 518 YIHALVRDEHGKKMSKSTGNVIDPLAMIDKYGCDSLRFTLTSFAAMGRDIKLSEARIEG- 576

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 N I N  +R   M +   +               IL     + +E    ++   
Sbjct: 577 -YRHFINKIWN-AARFALMHVDGTEPEFDPKALSGLHHTWILHRLETLKKEHSAQIEGYR 634

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A   +   V     D Y +  KP EL   +    +        V+ ++ I+    +P
Sbjct: 635 FNEAAQGLYGFVWREFCDWYLELIKP-ELYGEDEAAKAAARSCLKHVLSEIMIIAHPVIP 693

Query: 468 KLANKIFDILFVAD 481
            +  +I+  +   D
Sbjct: 694 FVTQEIWSCIPTLD 707



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA  + + D++ R+ R  G  VL+  GTD  G       + 
Sbjct: 42  DNYSIVIPPPNVTGALHMGHALNLTLQDIMCRYMRQRGKTVLWVPGTDHAGIATQNVVER 101

Query: 65  AGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
             +           + F+ +                R M   +D S + F  T ++    
Sbjct: 102 KLLAEGTKREDLGREEFISRVWEWKEDYGGRILNQIRRMGASVDWSRERF--TMDEGLSK 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G +Y+G Y   +  R      DDEV  
Sbjct: 160 AVREVFVSLYEQGLVYRGKYIINWCTRCHTALADDEVEY 198


>gi|228933508|ref|ZP_04096361.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826237|gb|EEM72017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 1033

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 141/389 (36%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLRKHSMKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++E+ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVEKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|218903317|ref|YP_002451151.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218534804|gb|ACK87202.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 1033

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 146/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K +     H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIDDLRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|329897211|ref|ZP_08271951.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921366|gb|EGG28760.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 810

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y      YP+ + H+GH     IADV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  KREKFYCLAMFPYPSGKLHMGHVRNYTIADVIARFQRMLGKNVLQPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    RD    L  +YD    + T E  ++   +  + ++ +KG  Y
Sbjct: 89  IKNNVPPAAWTADNINYMRDQLKRLGFAYDWTREVTTCEPDYYRWEQWFFTRLFEKGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D     +++V  G          NPV+    + +F +++ Y ++LL+  
Sbjct: 149 KKQAEVNWCETDNTVLANEQVVDG----CCWRCDNPVERRNIDQWFIKITDYAEQLLNDI 204

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 205 DQLDGWPEQVKTMQRNWIGRSEG 227



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 103/276 (37%), Gaps = 39/276 (14%)

Query: 232 IDALTNYLTTT---GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y                 A +W P D +V G +    H +Y   F         
Sbjct: 492 FMESSWYYARYASATNGKAMLDDDANYWLPVDQYVGGIEHAILHLLYARFFHKLLRDEGL 551

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++++ P  K++ + G +L  G K+SKS GN +DP  +I+  G D +R F +      +  
Sbjct: 552 VNSDEPF-KRLLTQGMVLKDGAKMSKSKGNTVDPQALIDSYGADTVRLFSMFAAPPEQSL 610

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +   G+         +G    + R   M  +  DG   TP     + + +       + 
Sbjct: 611 EWSDAGV---------DGAHRFLKRLWRMAFEHIDGTADTPEKPLTA-KDVRRKLHETIA 660

Query: 400 EIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++ ++   +   + A+A V+ L +E+           ++    D AS    V  E +   
Sbjct: 661 KVTDDYGRRQTFNTAIAAVMELCNEL-----------VRLDQSDSAS--REVMREGLSVA 707

Query: 459 AILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
             LL   VP + + ++  L    +  N  +  +DQ 
Sbjct: 708 VRLLAPIVPHVCHSLWQALGYKSDIANEAWPEVDQA 743


>gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 965

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/309 (21%), Positives = 119/309 (38%), Gaps = 15/309 (4%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW----GIKIPDDPQYIMY 229
              L   E            +  + F  +G +  + S          G+K+  DP  ++ 
Sbjct: 480 YHWLENIEPWCISRQLWWGHHIPVWFDANGNQYCAASEAEAQAQAGVGVKLTRDPD-VLD 538

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +    + T G+ D  D  + K++P D+ + G+DIL F    +      +    P  
Sbjct: 539 TWFSSGLWPIGTLGWPDQTDALE-KYFPTDVLITGQDILFFWVARMMMMQQAVVDKDPFH 597

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                      KG K+SK+ GNVIDP+E+++E G DALR+ + +  A G       D +K
Sbjct: 598 TVYLHQLVRDEKGHKMSKTKGNVIDPLEIVDEFGADALRFTMTQMAAIGGVLKLSVDRIK 657

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                +    + N  +R   M    + G    P A    +  I+   ++V +E+   +  
Sbjct: 658 G--YRNFGTKLWN-AARFAEMNHA-FGGDGRIPAAQATVNRWIIGETAKVREEVDAALAA 713

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   +   V     D Y +  KP  L   +    +        VI Q  ++L   
Sbjct: 714 YRFNDAANALYVFVWGKVCDWYVEFSKP-LLSGEDAATKAETQATMAWVIDQCLLMLHPI 772

Query: 466 VPKLANKIF 474
           +P +  +++
Sbjct: 773 MPFITEELW 781



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 54/193 (27%), Gaps = 32/193 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + DVL R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMIPPPNVTGALHVGHAFNNTLQDVLTRWHRMRGFDTLWQPGQDHAGIATQLQVEK 95

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--------------- 92
                                   +  Q      +    L  S D               
Sbjct: 96  MLAGQGQPGRRDLGREKFLAKIWEWKGQYGGTIVNQLKRLGASCDWSRNAFTMAGASGDP 155

Query: 93  DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
                     HD    ++  + +KG IY+G     +    E   +D EV       +   
Sbjct: 156 RTGHENSANFHDAVLKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENTEVDGHMWH 215

Query: 153 QHNPVQWMEEEGY 165
              P+   E   Y
Sbjct: 216 FKYPLAGGESYTY 228


>gi|157962960|ref|YP_001502994.1| leucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157847960|gb|ABV88459.1| leucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 868

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     A
Sbjct: 39  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 99  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 159 YKKTSSVNWCPNDETVLANEQVIDG----CCWRCDTTVEQKEIPQWFIKITEYAEELLND 214

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++  E+   ++           G+     ++ S ++FD     PD    + YV I A 
Sbjct: 215 IDTLEEWPEQVKTMQRNWIGRSEGIEMTFQVAGSDQSFDIYTTRPDTVMGVTYVAIAAG 273



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 109/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 501 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDTGL 560

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 561 VNSNEPAKRLLTQGMVLADAYYYNNEKGARVWVAPSDVTVQETDDKGRTVKAVDSEGHEL 620

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++       A
Sbjct: 621 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAAPPELTLEWQESSVEG------A 674

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + ++    + +         +   + + +     + + ++ ++++ +   + A+
Sbjct: 675 HRFIKRLWKTAHDHIANGTTAELDVKSLNAAQKELRRELHKTIAKVGDDIERRQMFNTAI 734

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++ + +      P    +T+ D+A     +  E +  +  LL   +P     ++
Sbjct: 735 ASIMELMNRLQK-----AP---SETDQDKA-----LMQEALNAVIRLLYPIIPHTCFVLW 781

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    A E   +  +D+
Sbjct: 782 NELGNQGAIEEVLWPEVDE 800


>gi|71281480|ref|YP_267488.1| valyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|90103531|sp|Q488M6|SYV_COLP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71147220|gb|AAZ27693.1| valyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 973

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 134/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R+       +   +      +P +  N   S++   ++D  +SR+   W
Sbjct: 389 IEPLLTDQWYVRVEKLAGPAVDAVKDGQIEFVPKQYENMYFSWMN-NIQDWCISRQ-LWW 446

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 447 GHRIPAWYDENEKVYVGRTEEEVRANNDIAADMKLRQDDDVLDTWFSSALWTFSTLGWPK 506

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILH 298
           + +  K    P D+ V G DI+ F         +  N        +P  K   +      
Sbjct: 507 DTEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFNKDENGKAQIPFKKIYMTGLIRDE 565

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 566 NGDKMSKSKGNVVDPLDMIDGISLEDLLQKRTGNMMQPKLAKKIEKLTRKEYPEGIEAHG 625

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L      G+D  +D   L+     +  N + N  SR V M  +++D    +P 
Sbjct: 626 TDALRFTLTSVATTGRDISWDMKRLEG--YRNFTNKLWN-ASRYVMMNTEEFDCGQSSPE 682

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+    + ++ + E         A   +         D Y +  KP
Sbjct: 683 GKAGDMELSLADRWIIGQFEQTVKTVHEAFDTYRFDLASQALYEFTWNQFCDWYLELTKP 742

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L K N  +     +  V V+  L  L+   +P +   I+  
Sbjct: 743 -VLFKENEAQQRGTRHTLVNVLEALLRLMHPIMPFITETIWQR 784



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 25/169 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           AI  PN     H+GHA++  I D L R+ R+ G + L+ TG D  G       +      
Sbjct: 53  AIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQTGCDHAGIATQMVVERKIAAE 112

Query: 70  KVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +                            +  R + + +D S + F  T +    +  + 
Sbjct: 113 EDKTRHDYGREGFIDKIWEWKEESGGTIGKQMRRLGNSIDWSRERF--TMDDGMSEAVQE 170

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 171 VFVRLFEDDLIYRGKRLVNWDPKFHTAISDLEVENKDKKGHMWHLRYPL 219


>gi|150396370|ref|YP_001326837.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027885|gb|ABR60002.1| valyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 947

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 126/348 (36%), Gaps = 33/348 (9%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +    +WME    +                 P+  + +ER  E               
Sbjct: 425 NWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGQIFVERTEEEALHAAIQHYIAHEG 484

Query: 211 RK---------TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                       F  G  +  D   ++  W  +     +T G+         K++  D+ 
Sbjct: 485 PMKAYVEDLLENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPKETP-ELDKYYQTDVL 542

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEKISKSLGN 309
           V G DI+ F    W A ++   L   K            V+ H  +  K G+K+SKS GN
Sbjct: 543 VTGFDIIFF----WVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQKMSKSKGN 598

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           VIDP+E+I+E G DALR+ L    A G+D   D   +      +    + N  +R   M 
Sbjct: 599 VIDPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMN 655

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                       A   ++  IL+  SR ++++ E +++   + A   +   V     D Y
Sbjct: 656 GATSSEGFIPEAASLTTNRWILTELSRTIRDVSEAIEDYRFNDAAGTLYRFVWNQFCDWY 715

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  KP      +          T  V+ +   LL  F+P +  +++D
Sbjct: 716 LELLKP-VFNGDDEAAKRESQACTAYVLDETYKLLHPFMPFMTEELWD 762



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 23/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA    + D++ RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDLMVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +           + +    D S + F  T ++   
Sbjct: 96  QLRERQLPGRREMGREAFIEKVWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           D    ++  +  +G IY+      +  + +   +D EV +     +      P++
Sbjct: 154 DAVIEVFVSLYKEGLIYRDKRLVNWDPKLQTAISDIEVEQVEINGHLWHLRYPLE 208


>gi|322514586|ref|ZP_08067619.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119525|gb|EFX91612.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 861

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTKLYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL++ 
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLNHL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 106/297 (35%), Gaps = 78/297 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPK 288
           Y     +    D  +A +W P D ++ G +    H +Y+  F         L+++ P+ K
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDVGILNSDEPVTK 562

Query: 289 --------------------KVFSHGFIL-----HKGE------------------KISK 305
                               +++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +             A  ++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVYEYSQNSATAALDVTALNKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +++ +      P E      D+A     V  E +  +  +L    P +  +++  L 
Sbjct: 734 NKLTK-----APLE---NEQDKA-----VMAEALSAVVRMLYPITPHICFELWQALG 777


>gi|113461693|ref|YP_719762.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945429|sp|Q0I5C5|SYL_HAES1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112823736|gb|ABI25825.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 860

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++          +D  I T +  ++   +  + ++  KG +Y
Sbjct: 91  IKNKTAPAKWTYENIEYMKNQLKVLGFGFDWDREITTCKPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LLS  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLSDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  PE+   ++           G
Sbjct: 207 DQLPEWPDMVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 73/178 (41%), Gaps = 20/178 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++       AN     
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLRR 672

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           +   V    ++       P A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 673 LWNLVFEYNQNPAQTALDPTALSVEQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++++ +               DRA     V  E +  +  +L    P +  +++  L 
Sbjct: 733 MNKLTK--------ASLSNEQDRA-----VMAEALNAVVRMLYPITPHICFQLWQDLG 777


>gi|254361090|ref|ZP_04977235.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153092576|gb|EDN73631.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 861

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLNQL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 101/297 (34%), Gaps = 78/297 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++         T       D   + +     + + ++ +++  +   + A+A V+ L+
Sbjct: 674 WNLVYSYAQNPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +++ +      P E   T  D+A     V  E +  +  +L    P +  +++ +L 
Sbjct: 734 NKLTK-----APLE---TEQDKA-----VMAEALSAVVRMLYPITPHICFELWQVLG 777


>gi|228939323|ref|ZP_04101915.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228972201|ref|ZP_04132816.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978816|ref|ZP_04139185.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228780892|gb|EEM29101.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228787514|gb|EEM35478.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820347|gb|EEM66380.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326939899|gb|AEA15795.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 1033

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---NHQFAPKSIAELRKHSTNETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++  LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAVLVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|148240776|ref|YP_001226163.1| valyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147849315|emb|CAK24866.1| Valyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 914

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 142/400 (35%), Gaps = 67/400 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F +      +     E      +P  R  +V     + ++D  +SR+   
Sbjct: 351 PVEPLLSTQWFVKTEPLAARCREALEKQDPRFIPE-RWEKVYRDWLTDIRDWCISRQ-LW 408

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +  + ++  W  +
Sbjct: 409 WGHRIPAWFVISETGGNYTDTTPYVVARNEAEALEKAKAEYGAAAEIEQDEDVLDTWFSS 468

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D       +++P +  V G DI+ F    +   A   +  +P       
Sbjct: 469 GLWPFSTLGWPDADSADLQRWYPTNTLVTGFDIIFFWVARMTMMAGAFTGEMPFQDVYIH 528

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG-----L 346
                 +  K+SKS GN IDP+ +I+  G DALR+ LVRE+A  G+D   D D       
Sbjct: 529 GLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVREVAGAGQDIRLDYDRKTDTSA 588

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRE 403
               + + AN + N  +R   M L          P P A   +D  ILS  +RV +E  E
Sbjct: 589 TVEASRNFANKLWN-ATRFALMNLGGETPAQLGDPDPAALQLADRWILSRLARVNRETAE 647

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIR 456
              +  +  A   +         D Y +  K       NP             V  +VI 
Sbjct: 648 RYSSYGLGEAAKGLYEFAWNDVCDWYLELSKRRLNPGENPSAEALADQRVAKQVLAKVIS 707

Query: 457 QLAILLQAFVPKLANKIFDILFVADEN-----RCFQSLDQ 491
           Q+ ++L   +P L  +++  +    E      + +  LD+
Sbjct: 708 QMHLMLHPLMPHLTEELWHSVTGEPETTFLALQPWPVLDE 747



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + R+ RL G +VL   GTD     +    + 
Sbjct: 36  EPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRYQRLAGKNVLCLPGTDHASIAVQTILEK 95

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                                         +     R +   +D     F  T ++   +
Sbjct: 96  QLKEEGKTRHDLGREAFLERAWQWKAESGGRIVGQLRRLGYSVDWQRQRF--TLDEGLSE 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
             +  + ++ ++G I +G Y   +     +  +D EV     DG  ++ ++
Sbjct: 154 AVKEAFVRLHEQGLIVRGEYLVNWCPASGSAVSDLEVEMKEVDGHLWHFRY 204


>gi|315180776|gb|ADT87690.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 376

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 12/232 (5%)

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGF 340
           +    P  VF HG++   G K+SKS G  +     +  +  + LRY+   +  +   D  
Sbjct: 5   SGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAKLNSRIDDLD 64

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            + +   +RVNAD+ N I NL SR+   I K +DG +    A  E     ++   R    
Sbjct: 65  LNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSDRFAEPELYNEFVAAADR---- 120

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQL 458
           I E  + +   RA+ ++ +L  + ++Y D + PW + K          +  V + + R L
Sbjct: 121 IAELYEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGINLFRVL 180

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
              L+  +P LA +    L    +   +  + Q L  G  +   F  +F R 
Sbjct: 181 LTYLKPVMPGLAARTEAFLN---QELTWDGVAQPLT-GHTISA-FKALFNRI 227


>gi|83941191|ref|ZP_00953653.1| valyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83847011|gb|EAP84886.1| valyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 1013

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 14/266 (5%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           ++I  DP  ++  W  +    + T G+ +  D   AK++P  + + G DI+ F    +  
Sbjct: 570 VEIRRDPD-VLDTWFSSGLWPIGTLGWPEQTD-ELAKYFPTSVLITGFDIIFFWVARMMM 627

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             + +    P             KG+K+SKSLGNV+DP+++I+E G DA+R+ L    A 
Sbjct: 628 MQYAVVDQKPFDTVYVHALVRDEKGKKMSKSLGNVLDPLDLIDEYGADAVRFTLTAMAAM 687

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESIL 391
           G+D       +      +    + N    +    + +      T  + T+ D    + I+
Sbjct: 688 GRDLKLSTARIAG--YRNFGTKLWNAHRFAEMNSVFEDSVAAVTYTSHTQVDHTLNKWII 745

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
              +RV +E+   + N   + A   + + V     D Y +  KP  L + +   A+    
Sbjct: 746 GETARVREEVDAALDNYRFNDAANALYAFVWGKVCDWYVELSKP--LLQDDAPEAAETRQ 803

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
               V+ Q  +LL   +P +  +++ 
Sbjct: 804 TLKWVLDQCLVLLHPIMPYITEELWQ 829



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 29/182 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   +           H+GHA+   + D+L R+HR+ G D L+  G D  G      
Sbjct: 33  SRKETFSVMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMV 92

Query: 62  AQNA---------GVTTKVFVDQNSRNF-----------RDMADVLDISYDDFIRTTEK- 100
            +             T + F  +                + +   LD S + F  +    
Sbjct: 93  VERELAKDGKRRTDFTREDFTAKVWEQKQKSGGTIIGQLKRLGTSLDWSRNAFTMSGAPG 152

Query: 101 -------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNA 152
                    HD    ++  + +KG IY+G     +    E   +D EV     DG  ++ 
Sbjct: 153 APAGEEGNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVESTEVDGHMWHF 212

Query: 153 QH 154
           ++
Sbjct: 213 KY 214


>gi|163734025|ref|ZP_02141466.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161392561|gb|EDQ16889.1| valyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 1038

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 111/284 (39%), Gaps = 19/284 (6%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGY-----LDNPDGSKAKFWPADLHVIGKDILR 269
            + + +  DP  ++  W  +    + T G+      D  + +  K++P    + G DI+ 
Sbjct: 579 KFVVILDRDPD-VLDTWFSSGLWPIGTLGWTGDAEADAANEALQKYFPTSTLITGFDIIF 637

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +    + ++   P             KG+K+SKSLGNVIDP+++I+E G DA+R+
Sbjct: 638 FWVARMMMMQYAVTGQKPFSTVYVHALVRDEKGKKMSKSLGNVIDPLDMIDEFGADAVRF 697

Query: 328 FLVREIACGKDGFYDKDGLKKRVN--------ADLANGIGNLVSRSVSMILKDYDGMIPT 379
            L    A G+D       +    N           A        R+    +       P 
Sbjct: 698 TLTAMAAMGRDLKLSTQRIAGYRNFGTKLWNACRFAEMNEVFAQRAARTDVIPTQNRPPA 757

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                  ++ I+   ++V QEI   ++N   + A     + V     D Y +  KP    
Sbjct: 758 -DVEQAVNKWIIGETAKVRQEIDAALENYRFNDAANAAYAFVWGKVCDWYVELSKPLLQD 816

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +TN + A+        V+ Q  ILL   +P +  +++      +
Sbjct: 817 ETNAEYAAETRATMAWVLDQCMILLHPVMPFITEELWAATGTRE 860



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 31/181 (17%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  GTD  G       + 
Sbjct: 37  ETFSIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTDHAGIATQMVTER 96

Query: 65  AGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDF---IRTTEK 100
                     +                          + +    D S + F       + 
Sbjct: 97  EMAANGEPTRREMGREKFLDRVWQQKVASRGTIIGQLKRLGASCDWSREAFTMGGAPGDP 156

Query: 101 R------HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQ 153
                   HD    ++  + +KG IY+G     +    E   +D EV     DG  ++ +
Sbjct: 157 DAGNGPNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFK 216

Query: 154 H 154
           +
Sbjct: 217 Y 217


>gi|189083233|sp|B0TR44|SYL_SHEHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 91  IKNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   DE    +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDETVLANEQVIDG----CCWRCDTTVEQKEIPQWFIKITEYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +   E+   ++           G+     ++ S ++FD     PD    + YV I A 
Sbjct: 207 DQLDEWPEQVKTMQRNWIGRSEGIEMTFQVADSDQSFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 107/319 (33%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y                KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADQMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDSGL 551

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 552 VNSDEPAKRLLTQGMVLADAYYYNNEKGARVWVAPSDVTVLETDDKGRTVKAVDSEGNEL 611

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++       A
Sbjct: 612 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAAPPELTLEWQESSVEG------A 665

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + ++    +           +   + + +     + + ++ ++++ +   + A+
Sbjct: 666 HRFIKRLWKTAHDHIATGPTAELDVKSLNAAQKELRRELHKTIAKVGDDIERRQMFNTAI 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P    +T  D+A     +  E +  +  LL   +P     ++
Sbjct: 726 ASVMELMNRLQK-----AP---SETEQDKA-----LMQEALNAVVRLLYPIIPHTCFVLW 772

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    A E+  +  +D+
Sbjct: 773 NDLGNQGAIEDVLWPEVDE 791


>gi|219558447|ref|ZP_03537523.1| valyl-tRNA synthetase [Mycobacterium tuberculosis T17]
          Length = 757

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 128/383 (33%), Gaps = 58/383 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        S+V   + D  +SR+   
Sbjct: 361 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDD-MHDWCISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D       
Sbjct: 419 WGHRIPIWYGPDGEQVCVGPDETPPQGWEQDPDVLDTWFSSALWPFSTLGWPDKTA-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 478 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAITLDGRRGPQVPFTDVFLHGLIRDES 537

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ +E  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 538 GRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASPGGDLAVSEDAV--RASRNFGTKLF 595

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P+P   T++D  IL     V  E+          RA   +  
Sbjct: 596 NATRYAL--LNGAAPAPLPSPNELTDADRWILGRLEEVRAEVDSAFDGYEFSRACESLYH 653

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIF-- 474
              +   D Y +      L KT   +  T    V    +  L  LL   +P L   ++  
Sbjct: 654 FAWDEFCDWYLE------LAKTQLAQGLTHTTAVLAAGLDTLLRLLHPVIPFLTEALWLA 707

Query: 475 ----DILFVADENRCFQSLDQRL 493
               + L  A+    F  L   L
Sbjct: 708 LTGRESLVSANWTEPFPGLAWTL 730



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA E  + D L R  R+ G +VL+  GTD  G      
Sbjct: 41  STKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSV 100

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 101 VEQQLAVDGKTKEDLGRELFVDKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                R ++K++ D G IY+      +S   +   +D EV   
Sbjct: 159 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTAISDLEVNYR 201


>gi|261493583|ref|ZP_05990103.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495421|ref|ZP_05991869.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308926|gb|EEY10181.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310765|gb|EEY11948.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 861

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLNQL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 101/297 (34%), Gaps = 78/297 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQRRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++         T       D   + +     + + ++ +++  +   + A+A V+ L+
Sbjct: 674 WNLVYSYAQNPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +++ +      P E   T  D+A     V  E +  +  +L    P +  +++ +L 
Sbjct: 734 NKLTK-----APLE---TEQDKA-----VMAEALSAVVRMLYPITPHICFELWQVLG 777


>gi|294495458|ref|YP_003541951.1| isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666457|gb|ADE36306.1| Isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 1056

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 82/390 (21%), Positives = 143/390 (36%), Gaps = 37/390 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY- 172
              G  ++      Y    + +     +  G   +   A+   V+W  +     R   + 
Sbjct: 391 HRYGHCWRCKTPIIYLATKQWF-----IKIGDLKEDMLAEIKKVEWHPDWAGSARFRDWI 445

Query: 173 --QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------WGIKI 220
                     + +    LP+ R  E  S    G +         D            IK+
Sbjct: 446 EGARDWCISRQRYWGIPLPVWRCEECESLKVVGTRKELQEIADVDPNTELHRPYVDDIKL 505

Query: 221 PDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
             D          +  VW D+      T  Y    D  K ++WPAD    G D     F+
Sbjct: 506 TCDCGGRMSRIEDVFDVWFDSAVASWATLNYPHRQDQFK-EWWPADFITEGHDQTRGWFY 564

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    + +     P    +     +   G+K+SKSLGNV+ P EVIE+ G D+LR +++ 
Sbjct: 565 SQLGASMVAFGQAPYKSVLMHGFTLDSTGKKMSKSLGNVVQPHEVIEKYGADSLRCYVLS 624

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTE----S 386
             A  +D  +++D L         N + N+    +  M L ++D    +  A        
Sbjct: 625 SSAPWEDLKFNQDELATIHRT--INILWNVYRFPLPYMALDEFDPQEVSFEAVEPYLRKE 682

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D  ILS    V++E+  +M+  L+HRA+  +   V       Y    +P    + +    
Sbjct: 683 DRWILSRMQSVIEEVDRSMEQYLLHRAIRTINEFVLEDLSRWYIQLIRPRTWNEADDPDK 742

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V  V  +V   L  ++  F+P LA +++
Sbjct: 743 LAVYRVLYDVFVTLCKVIAPFMPHLAEEMY 772



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  ++ +      Y     H+G A+  II D + R+  ++G D++   G D HG  I   
Sbjct: 36  RGEKRFFFVDGPPYTTGHIHLGTAWNKIIKDSILRYKSMNGHDIVDRAGWDMHGLPIEVK 95

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     K F  +      D    L   + ++D   T +  +
Sbjct: 96  VEGVLGFESKKDIESYGVENFVDKCKEFALKQKDAMTDQFRTLGTWLDWEDPYMTLKDEY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      K+  +K  +  G     +  R E    D EV  
Sbjct: 156 IEAAWWTLKQAYEKDLLEVGKRVVNWCPRCETAIADSEVEY 196


>gi|159904351|ref|YP_001551695.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159889527|gb|ABX09741.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 933

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 83/415 (20%), Positives = 149/415 (35%), Gaps = 65/415 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F R+    D+  ++         P  R  +V     +G++D  +SR+   
Sbjct: 369 PVEPLLSTQWFVRMEPMADRCRAHLVKGEPQFFPT-RWEKVYRDWLTGIRDWCISRQ-LW 426

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                         +    ++  W  +
Sbjct: 427 WGHRIPAWFVVSETDSIVTDHTPYIVALSEEEALLQAREKFGDDVAIEQDADVLDTWFSS 486

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  D     ++P +  V G DI+ F    +   A   +  +P       
Sbjct: 487 GLWPFSTLGWPDEDDSDFNCWYPTNTLVTGFDIIFFWVARMTMMAGAFTGQMPFKDVYIH 546

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDG-LKKRV 350
                 +  K+SKSLGN IDP+ +I+  G DALR+ LV+E+A  G+D   D D      V
Sbjct: 547 GLVRDEQNRKMSKSLGNGIDPLVLIDRYGTDALRFALVKEVAGAGQDIRLDYDRKTDTSV 606

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTP-------GAFTESDESILSVCSRVLQEIRE 403
             + A    N +  +    L +                    SD+ ILS  +R+  E  +
Sbjct: 607 TVEAARNFANKLWNATRFALINLGTTTFDETFEELNFSDLQLSDKWILSRLARINSETSK 666

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPW-----ELKKTNPDRASTVLYVTVEVIR 456
              +  +  A   +         D Y +  K        L ++          V  +V+R
Sbjct: 667 KFTSYALGEAAKGLYEFSWNDFCDWYLELIKRRLNPGDSLTQSQLKDRRIAQQVMFKVLR 726

Query: 457 QLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFM---LHKTFDPIF 507
           +L ++L   +P L  +++  +    D+     +L    + GF+   L  +F  +F
Sbjct: 727 ELLVMLHPLMPHLTEELWHGITGFPDQKMLALNLWPACQEGFLDEELESSFSALF 781



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA+   + D + RF RL G +VL   GTD     +    + 
Sbjct: 49  EPFSLVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTILEK 108

Query: 65  --------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              + +  +       +   R +   +D   + F  T ++R   
Sbjct: 109 QFKEEGINRDDLGREEFLQRAWAWKSESGGRIAAQLRRLGYSVDWQRERF--TMDERLSK 166

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + ++  +G IY+G Y   +     +  +D EV       Y      P+
Sbjct: 167 AVVEAFVRLHQQGLIYRGEYLVNWCPASGSAVSDLEVEMKEVDGYLWHFQYPL 219


>gi|269123021|ref|YP_003305598.1| valyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314347|gb|ACZ00721.1| valyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 879

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 136/372 (36%), Gaps = 9/372 (2%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K     G  Y+        + D+ +     + K A     N +        E+ Y+  L 
Sbjct: 333 KHNHAVGHCYRCKTIVEPRISDQWFVKMQPLAKRALDVVKNGEVKLTPKRMEKRYYNWLE 392

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +D  +S        I      N  +   K+  +   +  + F   + + ++   ++  
Sbjct: 393 NIRDWTISRQIWWGHRIPAYYTPNNELIVAKNIEEAKKICVEKFGEELPLREETD-VLDT 451

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           W  +     +T G+ +       +++P DL V G DI+ F    +   +      +P  +
Sbjct: 452 WFSSALWPFSTMGWPEKTR-DLERYFPTDLLVTGDDIIFFWVARMIMMSLHFLDTIPFKE 510

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
             F+       G K+SKSLGN  D + ++++ G DA+R+  +   + G+D  + +  ++ 
Sbjct: 511 VYFTGIIRDEIGRKMSKSLGNAPDTLAILDKYGSDAVRFSFMYNTSQGQDILFSEKLIE- 569

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            +    AN I N     +S +    + +      F   D+ ILS      + I + M+  
Sbjct: 570 -MGHTFANKIWNASKFVISNLEGFKEDISILDLDFKLEDQWILSKLQLASRNINKEMEEY 628

Query: 409 LIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAF 465
            I  +             D Y +  K        N     T  ++   V+     LL  F
Sbjct: 629 NIDTSAKIAYEFFRNDFCDWYLEIAKTRIYGVDENDIDRQTAQWILRHVLDNGLRLLHPF 688

Query: 466 VPKLANKIFDIL 477
           +P +  +I+  +
Sbjct: 689 MPFVTEEIWQKI 700



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 22/179 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I           H+GH     I DV+ R+ R+ G D L+ TGTD  G       
Sbjct: 30  KKPAYTIVIPPPNVTGVLHMGHVLNNTIQDVVIRYKRMKGYDTLWQTGTDHAGIATQNVV 89

Query: 63  Q---------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +            +  + F+ +                R + + +D   + F  T ++  
Sbjct: 90  ERKLAESNLRKEDLGREEFIKKVWEWKEKHGGIITKQQRRIGNSVDWERERF--TMDEGL 147

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            +  + ++  + ++G IYKG Y   +  R      DDE+              P++  E
Sbjct: 148 SEAVKEVFVTLYNQGLIYKGEYMVNWCPRCTTALADDEINHIDKEGNIWEIKYPLKDEE 206


>gi|71083652|ref|YP_266372.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|90101540|sp|Q4FM20|SYV_PELUB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71062765|gb|AAZ21768.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 875

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 130/379 (34%), Gaps = 43/379 (11%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E  +   E        Y +  ++ ++    E +F        K      S      P  
Sbjct: 324 KEKEFFVKEENIKNKVPYGDRSNSIIEPFLTEQWFVDAKKLSIKAKDIVNSKKTNFFPAN 383

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY----------------------- 226
             ++      + ++   +SR+   WG  I     P                         
Sbjct: 384 W-SKTYFQWMNNIEPWCISRQ-LWWGHQIPAWYGPDKKIFVAINEEEAKLDAKKFYNKDV 441

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                  ++  W  +      T G+ DN +    KF+P  + V G DI+ F    +    
Sbjct: 442 DLIRDPDVLDTWFSSGLWPFATLGWPDNKEYVD-KFYPTSVLVTGFDIIFFWVARMIMFG 500

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P             KG+K+SKS GNVI+P+++IE+   DALR+ L+   + G 
Sbjct: 501 MEFLDKEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIEKYSADALRFTLLSMASPGT 560

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D    +D +K     +  N + N  +  +     D+  +   P      ++ I +     
Sbjct: 561 DVKLSEDRVKG--YRNFLNKLWN-ANNFLITNNCDFSKIDEKPILSININKWIYAELIET 617

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             +I +N+++     A             D Y +  K   L   +      V  V+  V 
Sbjct: 618 KNKIEKNLKDYRFDEAAKNAYQFTWHSYCDWYLELSKT-ILFSEDEKAKDEVRQVSAYVF 676

Query: 456 RQLAILLQAFVPKLANKIF 474
           +Q+ ILL  F+P +  +I+
Sbjct: 677 KQILILLHPFIPFVTEEIW 695



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 20/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++  +           H+GHA    I D+L R+HR++  + L+  GTD  G      
Sbjct: 29  KNKKQFSVVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTDHAGIATQAL 88

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +                        + +++     +    L  S D + R   T ++  
Sbjct: 89  VEKKLTADGIDKNEIGREKFIEKVWEWKEEHGDIILNQLKKLGCSCD-WSRNAFTMDENL 147

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             +   ++ ++  KG IYK      +    +   +D EV +            P++
Sbjct: 148 SKSVLKVFVELHKKGLIYKDKKLVNWDTVLKTAISDLEVDQREVNSKIYYIQYPIE 203


>gi|15603079|ref|NP_246151.1| leucyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431887|sp|P57923|SYL_PASMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12721568|gb|AAK03298.1| LeuS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 860

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 9/234 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  TNKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++          +D  + T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMKNQLKILGFGFDWDREVTTCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +  P +   ++           G      L+ S          PD    + YV
Sbjct: 206 LDHLPLWPDQVKTMQRNWIGRSEGVEITFQLANSEDNLTVYTTRPDTFFGVSYV 259



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 75/181 (41%), Gaps = 20/181 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++          + NL
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNL 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V        K        P A + + +++     + + ++ +++  +   + A+A ++ L
Sbjct: 677 VFEY----NKHPAETTVEPTALSSAQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++++ +      P        DRA     +  E +  +  +L    P +  +++  L   
Sbjct: 733 MNKLTK-----APLV---EVQDRA-----IMAEALSAVVRMLYPITPHICFQLWKDLGNT 779

Query: 481 D 481
           +
Sbjct: 780 E 780


>gi|315635076|ref|ZP_07890356.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476197|gb|EFU66949.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 862

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDKTVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLNCL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   ++           G
Sbjct: 207 DDLPQWPDQVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 103/300 (34%), Gaps = 78/300 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          +  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQQGMLNSEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGLVSSDEPANK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTKVTLERDDKGRIVKAVDDEGHELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    ++R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLARV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +           P A + + +++     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVFEYSKHPTKAAVNPTALSSAQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ R      P        DRA     V  E +  +  +L    P +  +++  L   D
Sbjct: 734 NKLTR-----AP---LDDEQDRA-----VMAEALSAVVRMLYPITPHICFRLWQELGNQD 780


>gi|52424393|ref|YP_087530.1| leucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|60390681|sp|Q65VR5|SYL_MANSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52306445|gb|AAU36945.1| LeuS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 860

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+ + H+GH     IADV++R+ R++G +VL   G D  G     A
Sbjct: 30  SSKEKYYCLSMFPYPSGRLHMGHVRNYTIADVVSRYQRMNGKNVLQPVGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L  SY  D  I T +  ++   +  + ++  KG +
Sbjct: 90  AVKNKTAPAKWTYENIDYMKNQLKMLGFSYDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   DE    +++V++G           PV+  E   +F +++ Y ++LLS 
Sbjct: 150 YKKTSVVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLSG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ PE+   ++           G
Sbjct: 206 LDTLPEWPDMVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 106/297 (35%), Gaps = 72/297 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKK 289
           Y +   +    D  +A +W P D ++ G +    H +Y+  F        L +     KK
Sbjct: 503 YTSPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGLVSTDEPTKK 562

Query: 290 VFSHGFIL--------------------------HKGE------------------KISK 305
           +   G +L                           KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTKVMLERDEKGRILKATDDEGHELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++          + NLV   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNLVFEY 680

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
                K+     P P A + + +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 681 ----NKNPVKTAPNPTALSSAQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R      P        DRA     V  E +  +  +L    P +  +++  L   D
Sbjct: 737 TR-----APLT---DEQDRA-----VMGEALSAVVRMLYPITPHICFQLWKDLGNED 780


>gi|16125569|ref|NP_420133.1| valyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234318|ref|YP_002516754.1| valyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81535578|sp|Q9A8N3|SYV_CAUCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13422663|gb|AAK23301.1| valyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220963490|gb|ACL94846.1| valyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 906

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 112/323 (34%), Gaps = 11/323 (3%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDW 216
           +    E  +F      +      +      +P     E  I   +S     + +R  F  
Sbjct: 403 EPKHWEKTYFEWLRNIEPWCVSRQLWWGHRIPAWFGPEGSIFVEESEEAAYAAARAQFGA 462

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
            +++  D   ++  W  +     +T G+ +       +F+P    V G DI+ F    + 
Sbjct: 463 DVQLTQDED-VLDTWFSSALWPFSTLGWPEKTS-DLERFYPTSTLVTGFDIIFFWVARMM 520

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                     P  +   +      KG K+SKS GNV+DP+ +I+E+G DA+R+ L     
Sbjct: 521 MMGIHFMGEAPFKQVFINALVRDEKGAKMSKSKGNVMDPLILIDELGCDAVRFTLTAMSG 580

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D    K  ++     +    + N  SR   M                  ++ I    
Sbjct: 581 QARDIKLSKQRIEG--YRNFGTKLWN-ASRFAQMNECVRVEGFDPSTVQQPINKWIRGET 637

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            + + E+ + ++      A   +   V     D Y +  KP  L   +    +       
Sbjct: 638 VKTVAEVTKALEAPSFDEAAGALYRFVWNVFCDWYLELAKP-ILNGDDAAAKAETRATAA 696

Query: 453 EVIRQLAILLQAFVPKLANKIFD 475
             +  +  LL   +P +  ++++
Sbjct: 697 WALDVILKLLHPVMPFITEELWE 719



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           HIGHA    + DVL RFHR+ G   L+  GTD  G       + 
Sbjct: 34  EPFVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTDHAGIATQMVVER 93

Query: 64  ---------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                       +  + FVD+                R +    D S + F  T ++   
Sbjct: 94  QLAAAGNIGRRDMGREAFVDKVWEWKAESGGAITNQLRRLGASCDWSRERF--TLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNA 152
              R ++ ++  +  +Y+      +  + +   +D EV +   DG Y++ 
Sbjct: 152 AAVRKVFVQLYKQNLLYRDKRLVNWDPQFQTAISDLEVEQKEVDGAYWHF 201


>gi|87301458|ref|ZP_01084298.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp.
           WH 5701]
 gi|87283675|gb|EAQ75629.1| t-RNA synthetase, class Ia:Valyl-tRNA synthetase [Synechococcus sp.
           WH 5701]
          Length = 938

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 85/398 (21%), Positives = 139/398 (34%), Gaps = 74/398 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+ +    +F R      +     +      +P +R  +V     + ++D  +SR+   
Sbjct: 366 PVEPLLSTQWFARAEPLAARCREALDRGEPRFVP-QRWEKVYRDWLTDIRDWCISRQ-LW 423

Query: 216 WGIKIP-------------------------------------------------DDPQY 226
           WG +IP                                                  DP  
Sbjct: 424 WGHRIPAWFVVSETGGVITEATPYVVARDDAEARRKAEQQFGEGSRAAGRELQLEQDPD- 482

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +     +T G+ D      A ++P  + V G DI+ F    +   A   +  +
Sbjct: 483 VLDTWFSSGLWPFSTLGWPDESAADLATWYPTSVLVTGFDIIFFWVARMTMLAGAFTGRM 542

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDK 343
           P    +           K+SKS GN IDP+ +IE  G DALR+ LVRE+A  G+D   D 
Sbjct: 543 PFADVMIHGLVRDENNRKMSKSAGNGIDPLPLIERYGADALRFALVREVAGAGQDIRLDY 602

Query: 344 DGLK-KRVNADLANGIGNLVSRSVSMILKDYDGM------IPTPGAFTESDESILSVCSR 396
           D         + A    N +  +    L +  G        P P A T +D  ILS  +R
Sbjct: 603 DRASGSSATVEAARNFANKLWNATRFALLNLGGETPASLGDPDPAALTLADRWILSRLAR 662

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK----PWELKKTNP------DRA 444
           V +E  E   +  +  A   +         D   +  K    P    +  P         
Sbjct: 663 VNRETAERYGSYGLGEAAKGLYEFAWNEVCDWTIELLKRRLNPRPAAEGEPLSNEALADQ 722

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                V  +V+ +L +LL   +P L+ +++  L  A E
Sbjct: 723 RVARQVLAKVLGELLVLLHPLMPHLSEELWHGLTGAPE 760



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GH +E  + D + RF RL G +VL   GTD     +    + 
Sbjct: 46  EPFSVVIPPPNVTGSLHMGHGFETALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTILEK 105

Query: 65  AGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              + +  +           R +   +D S + F  T +   + 
Sbjct: 106 QIKAEGGSKDDLGRDAFLERAWAWKAGSGGTIVGQLRRLGYSVDWSRERF--TLDPGLNK 163

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
                + ++ + G IY+G Y   +     +  +D EV     DG  ++ ++
Sbjct: 164 AVVEAFVRLHEHGLIYRGEYLVNWCPASGSAVSDLEVEMKELDGHLWHFRY 214


>gi|325293103|ref|YP_004278967.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060956|gb|ADY64647.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 947

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 133/394 (33%), Gaps = 75/394 (19%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++          ++         +P    N    +++  ++   +SR+   
Sbjct: 390 PIEPRLTDQWWVDNKTLAQPAIASVREGRTNFVPKNWENTYFQWME-NIQPWCISRQ-LW 447

Query: 216 WG--IKIPDDPQY----------------------------------------------- 226
           WG  I     P                                                 
Sbjct: 448 WGHQIPAWYGPDGQVFVEKTEEEALQAAIQHYIAHEGPWKAWVEEKLENFKPGEILTRDE 507

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
            ++  W  +     +T G+ +      A+++P ++ V G DI+ F    W   ++   L 
Sbjct: 508 DVLDTWFSSALWPFSTLGWPEKTP-ELARYYPTNVLVTGFDIIPF----WVVRMMQMGLH 562

Query: 286 LPKK-----------VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             K            V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    
Sbjct: 563 FMKDDAGNPVEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMA 622

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           A G+D   D   +      +    + N  +R   M     D       A    +  IL+ 
Sbjct: 623 AQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGVKRDLHFLAETASLTINRWILTE 679

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +   +++   ++N   + A   +   V     D Y +  KP      +    +      
Sbjct: 680 LANTARDVTAALENFRFNDASGILYRFVWNQFCDWYLELLKP-VFGGEDEAAKAESQACA 738

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
             V+ ++  LL  F+P +  +++       E R 
Sbjct: 739 AYVLDEIYKLLHPFMPFMTEELWAHTAGEGEERA 772



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 23/176 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  ETFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             +                 KV+  +           + +    D S + F  T ++   
Sbjct: 96  KLMEQQLPGRREMGREAFVDKVWEWKAESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +    ++  +  +  IYK      +  + +   +D EV +            P++ 
Sbjct: 154 EAVLEVFVTLYKQNLIYKDKRLVNWDPKLQTAISDMEVEQLEVKGNLWHFRYPLEK 209


>gi|187734802|ref|YP_001876914.1| valyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424854|gb|ACD04133.1| valyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 890

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 91/533 (17%), Positives = 175/533 (32%), Gaps = 57/533 (10%)

Query: 17  NAQPHIGHAY-EMIIADVLA-------RFHRLDGLDVLFTTG------TDEHGQKIAKAA 62
           +   H+     E I+ADV         R+  L G +V+            +   +I    
Sbjct: 211 SGALHVATTRPETIMADVAVAVNPKDPRYAHLIGKNVMRPLNPTPIPIIGDEYVEIEFGT 270

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK-------RHHDTCRILWKKISD 115
               +T            +   +++DI   D      +          D  R   + +  
Sbjct: 271 GALKITPAHDKADFEIGRKFNLEIIDILTPDGHINCPEVPELHGMDRFDARRKSVEMLEA 330

Query: 116 KGDIYKGC-------------YSGWYSLRDEAYYNDDEVYKGADGQ-YYNAQHNPVQWME 161
            G +                       L  + +     V + AD     +    P +W +
Sbjct: 331 SGLMVNVEDYDNKVGFSERANVPIEPRLSMQWFLKYPCVKEAADAVAGGDITFRPTRWAK 390

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              ++             +  H   +   + + E +      L   +L +     G + P
Sbjct: 391 TYAHWLENIQDWCISRQLWWGHRIPVWYRKDKAEELRNA-PALDASALEQGFLYVGTEPP 449

Query: 222 DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
            DP        +M  W  +         +    + ++AKF+P    V G DI+ F    +
Sbjct: 450 QDPDNWIQDNDVMDTWFSSWLWP-----FSTMDEETRAKFYPTTDLVTGPDIIFFWVARM 504

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
               +    + P     F+       G K+SKSLGN  DP+++I   G D LR+ L+R  
Sbjct: 505 IMAGYRFQHDKPFSNVFFTSIIRDKIGRKMSKSLGNSPDPLDLIANYGADGLRFGLMRIA 564

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G D  +D++ + +    + AN + N    +    L   D    T   ++    SI+S 
Sbjct: 565 PTGTDVRFDENQISE--GRNFANKLYN----ATRFRLMQGDARGETAPHYSSVHISIISK 618

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             ++  ++ + + +   +  +  +         DR+ +A K       +P   +  L   
Sbjct: 619 LKQLHADVEKALADYEFNALIQTLYQFFWNEYCDRFLEAVKGDLKDGADPAAQAATLTTM 678

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             V+R    LL   +P +  +++  L  A+ N     +   L     L    D
Sbjct: 679 DTVLRHYLALLHPVMPHITEELWASLGFAESNGGLPLMRTPLPSAENLLAGLD 731



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    +           H+GH     I D+L R  R  G + L+  GTD  G      
Sbjct: 33  SEKPAYSVVIPPPNVTGVLHLGHVLNNTIQDILVRRARQKGYEALWLPGTDHAGIATQVR 92

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +     T                   + +++     +    L  S  +D    T ++ +
Sbjct: 93  VEKDLKQTTGRSRHDLGREAFLEKVWEWKEKHGGIIINQLHKLGCSCDWDRERFTMDEEY 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 ++ ++  +G IY+G     +        +D+EV  
Sbjct: 153 TKAVGQVFIELFKEGLIYRGRRMVNWCPVSLTALSDEEVIM 193


>gi|254469825|ref|ZP_05083230.1| valyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961660|gb|EEA96855.1| valyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 945

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 68/343 (19%), Positives = 112/343 (32%), Gaps = 12/343 (3%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V    D  YY    N   W      ++                 +               
Sbjct: 423 VPANWDKTYYEWMENIQPWCISRQLWWGHRIPAWYGPDGKFFVEKSEEEALAAAAEFYGK 482

Query: 201 KSGLKDLSLSRKTFDWG---IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              L + + +    D G          + ++  W  +     +T G+ D      A+++P
Sbjct: 483 PVKLMEQNDALAAHDAGEADFVAMYRDEDVLDTWFSSALWPFSTMGWPDKTA-ELARYYP 541

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V G DI+ F    +           P             KG K+SKS GNVIDP+ 
Sbjct: 542 TSVLVTGFDIIFFWVARMMMMGNHYMKTEPFDTVYIHALVRDEKGAKMSKSKGNVIDPLA 601

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IEE G DALR+ L    A G+D       +      + A  + N V R   M       
Sbjct: 602 LIEEYGADALRFTLSAMAAQGRDIKLATSRVAG--YRNFATKLWN-VCRFAEMNECHAVE 658

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                      +  I++  SR ++E+ E +     + A       V     D Y +  KP
Sbjct: 659 GFDPALVKQTVNRWIVTETSRAIREVSEAIDTYRFNDAAGGAYRFVWNTFCDWYVELTKP 718

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                 + +    V   T  V  ++  LL  F+P +  +++  
Sbjct: 719 -IFYSDDEEAKEEVRATTAWVRDEILKLLHPFMPFITEELWQR 760



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 24/148 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------ 59
              I           H+GHA    + D++ R+ R+ G DVL+  G D  G          
Sbjct: 37  TYSIVIPPPNVTGSLHMGHALNNTLQDIMVRYQRMRGRDVLWQPGMDHAGIATQMVVERQ 96

Query: 60  ---------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                          +A        K           + +    D S + F  T ++   
Sbjct: 97  MAADGGNISRRDLGREAFVERVWKWKGESGGMIFNQLKRLGASCDWSRERF--TMDEGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
                ++  +  +  IYK      +  +
Sbjct: 155 KAVLEVFVSLYKENLIYKDKRLVNWDPK 182


>gi|189083234|sp|A8H7C2|SYL_SHEPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVIDG----CCWRCDTTVEQKEIPQWFIKITEYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++  E+   ++           G+     ++ S ++FD     PD    + YV I A 
Sbjct: 206 IDTLEEWPEQVKTMQRNWIGRSEGIEMTFQVAGSDQSFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 109/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDTGL 551

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 552 VNSNEPAKRLLTQGMVLADAYYYNNEKGARVWVAPSDVTVQETDDKGRTVKAVDSEGHEL 611

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++       A
Sbjct: 612 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAAPPELTLEWQESSVEG------A 665

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + ++    + +         +   + + +     + + ++ ++++ +   + A+
Sbjct: 666 HRFIKRLWKTAHDHIANGTTAELDVKSLNAAQKELRRELHKTIAKVGDDIERRQMFNTAI 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++ + +      P    +T+ D+A     +  E +  +  LL   +P     ++
Sbjct: 726 ASIMELMNRLQK-----AP---SETDQDKA-----LMQEALNAVIRLLYPIIPHTCFVLW 772

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    A E   +  +D+
Sbjct: 773 NELGNQGAIEEVLWPEVDE 791


>gi|33152252|ref|NP_873605.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|48428533|sp|Q7VM66|SYL_HAEDU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33148474|gb|AAP95994.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 861

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   VL  SY  D  I T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKNQLKVLGFSYDWDREITTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V++G           PV+  +   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQRDIPQWFIKITDYAEELLTQL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++  ++   ++           G
Sbjct: 207 DNLTQWPDQVKTMQRNWIGRSEG 229



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 103/297 (34%), Gaps = 78/297 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHQGMLDADEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILTSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVSLERDEKGRIINATDPAGHKLVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +                ++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVYEYVQQPATQALNALELNKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +++++      P E   ++ D+A     V  E +  +  +L    P +  +++  L 
Sbjct: 734 NKLNK-----APLE---SDQDKA-----VMAEALSAVVRMLYPITPHICFELWQALG 777


>gi|47570792|ref|ZP_00241355.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47552540|gb|EAL11028.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 183

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/177 (42%), Positives = 109/177 (61%), Gaps = 6/177 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GDIY 
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAY 172
             Y GWYS++DE +Y + + V    +G       +P     V+ + EE YFFR+  Y
Sbjct: 123 DEYEGWYSVQDETFYTEHQLVDPIMEGDKVVGGKSPDSGHDVELVREEIYFFRMGKY 179


>gi|301169639|emb|CBW29240.1| leucyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 861

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDALPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +            +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|212636651|ref|YP_002313176.1| leucyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212558135|gb|ACJ30589.1| Leucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 865

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     AA
Sbjct: 37  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +Y
Sbjct: 97  IKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 157 KKTANVNWCPNDETVLANEQVIDG----CCWRCDTTVEQKEIPQWFIKITEYADELLKDI 212

Query: 181 ESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYV 230
           +   E+   ++           G+     ++ S ++FD     PD    + YV
Sbjct: 213 DQLDEWPEQVKTMQRNWIGRSEGIEMTFQVADSDQSFDIYTTRPDTVMGVTYV 265



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 109/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y       D  +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 498 FMESSWYYARYCSPDADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDTGL 557

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 558 VNSDEPAKRLLTQGMVLADAYYYNNEKGARVWVAPSDVTVLETDDKGRTVKAVDSEGNEL 617

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++       A
Sbjct: 618 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAAPPELTLEWQESSVEG------A 671

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + ++    +     +     +     + +     + + ++ ++++ +   + A+
Sbjct: 672 HRFIKRLWKTAHDHIAAGPTVALDIKSLNAGQKELRRELHKTIAKVGDDIERRQMFNTAI 731

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P     +  DRA     +  E +  +  LL   +P  +  ++
Sbjct: 732 ASVMELMNRLQK-----AP---TDSEQDRA-----LMQEALSAVTRLLYPIIPHTSFSLW 778

Query: 475 DILF--VADENRCFQSLDQ 491
           + L    A E+  +  +D+
Sbjct: 779 NELGNTGAIEDVLWPEVDE 797


>gi|11499806|ref|NP_071049.1| valyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122909|sp|O28059|SYV_ARCFU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2648303|gb|AAB89032.1| valyl-tRNA synthetase (valS) [Archaeoglobus fulgidus DSM 4304]
          Length = 863

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 127/393 (32%), Gaps = 31/393 (7%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ----- 158
           +    + + +  +G + K                  E+           +   ++     
Sbjct: 307 EAREAILEDLKKEGKLLKQVEIDHNVGTCWRCKTPVEIIPAEQWFVKVEKEKILEAAKRI 366

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL-------- 209
            W+ E  Y    S  Q     +  S               +  +  +             
Sbjct: 367 KWVPEHMYSRLESWVQSMEWDWVISRQRIFATPIPAWYCKNCGEVVVAKEEWLPVDPTAT 426

Query: 210 --SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                    G         ++  W+D+    L   G+         K +P  L   G DI
Sbjct: 427 QPPEPCPKCGSTEFRGETDVLDTWMDSSITPLMICGWPS------LKEYPTHLRPQGHDI 480

Query: 268 LRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +R  A Y    +  L   +P  + V +       G K+SKSLGNVI P EV+E+ GVDAL
Sbjct: 481 IRTWAFYTILRSLALEGQIPWYEIVINGMVFGEDGRKMSKSLGNVIVPEEVVEKYGVDAL 540

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R +       G D  ++   +     +         ++R   M + DY           +
Sbjct: 541 RQW-AASGVIGDDIIFNWKDVIAA--SRFQQKFW-SITRFTLMHISDYTPSEEDKKLLRD 596

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDR 443
           +D  ILS  +R++ E+R++M       A+  + +       D Y +  K   L   + + 
Sbjct: 597 ADRWILSKLNRLVGEVRKHMDEYRFDEAIKAIRTFTWYEYADNYLEIVK-NRLYSGSEEE 655

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                +V    +  L  LL    P +A + +  
Sbjct: 656 KRAAKFVLSYALDVLTRLLAPITPFMAEECWSH 688



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 15/159 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I T   YP    HIGHA    I D +AR+ R++G +V+F  G D HG      
Sbjct: 31  SEKPHYIIDTPPPYPTGSFHIGHALNWCIIDFIARYKRMNGYEVMFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +      K              F ++N    R+ A  +  S D      T    ++   
Sbjct: 91  VEEKYGIKKGDIPRDEFRRLCVEFTEENIAKMRETARRMGYSIDWSKEYITMYPEYYSKT 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           ++ + ++ +KG IY+  +   +  R E      E+    
Sbjct: 151 QLSFVRMYNKGLIYRDYHPVVFCPRCETTIALAEIEYRQ 189


>gi|229091176|ref|ZP_04222399.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228692307|gb|EEL46043.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 1033

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 148/389 (38%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K +     H     P     E +   K  + ++ +S +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIDDLRKHSTKETP-----EDLELHKPYVDEVQVSCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSAMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +  +  A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQLTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|328882446|emb|CCA55685.1| Valyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 875

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 128/364 (35%), Gaps = 39/364 (10%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     V+      ++ ++                 I P E  +         + D  
Sbjct: 353 HCSRCKTTVEPRLSMQWWVKVGPLAQAAGDAVRDGSVEIHPKE-LSRRYFDWVDNMHDWC 411

Query: 209 LSRKTFDWG--IKIPDDPQY------------------------IMYVWIDALTNYLTTT 242
           +SR+   WG  I I   P+                         ++  W  +     +T 
Sbjct: 412 ISRQ-LWWGHRIPIWYGPEGQVVCVGPDEEPPGTEAEGWTQDPDVLDTWFSSGLWPFSTL 470

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHK 299
           G+ +      AKF+  D+ + G DI+ F     + +  + +   +P      +       
Sbjct: 471 GWPEKTP-DLAKFYSTDVLLTGHDIIFFWVARMMMFGLYAMDGEVPFKTVALTGLVRDEF 529

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS  N +DP++ ++  G DA+R+ L +    G D    +D ++   N   AN I 
Sbjct: 530 GKKMSKSNPNAVDPLDWMDAYGSDAVRFTLAKGANPGADVPIGEDWVQASRN--FANKIW 587

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M     +G +P     + +D  ILS  +  + ++    ++    +    +  
Sbjct: 588 N-ATRFAMMNGATIEGPLPDASEMSATDRWILSRLNETVAQVDAYYEDFQFAKLSESLYH 646

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +     Y +  K          + S    V  EV+  +  LL   VP + + ++  L
Sbjct: 647 FAWDEVFAWYVELSKTTFFAGGEGAKVS--GRVLGEVLDVMLRLLHPIVPFVTDTLWTTL 704

Query: 478 FVAD 481
              +
Sbjct: 705 TGGE 708



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 22/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA+++ + D L R  R+ G + L+  G D  G      
Sbjct: 44  SEKPPYTIVIPPPNVTGALHLGHAFQVTLMDALTRRKRMQGFETLWLPGMDHAGIATQNK 103

Query: 62  AQ-------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  +  +     R +   LD S + F  T ++ 
Sbjct: 104 VEQQLAEEGKSRHDLGRDAFVERVWQWKDEYGGRILGQLRRLGAGLDWSRERF--TMDEG 161

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                + ++K + +   IY+      +  R     +D EV    D
Sbjct: 162 LSKAVQKIFKDLYEDDLIYRAERIINWCPRCLTAISDIEVEYQDD 206


>gi|325577505|ref|ZP_08147867.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160609|gb|EGC72733.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 862

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   Y  D  I T    ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIEYMKNQLKMLGFGYDWDREIATCRPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P++   ++           G
Sbjct: 206 LDQLPQWPDMVKTMQHNWIGRSEG 229



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 77/181 (42%), Gaps = 26/181 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++         G    
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRF 669

Query: 362 VSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           + R  +++ +       T     A +   +++     + + ++ +++  +   + A+A V
Sbjct: 670 LGRVWNLVYEYSQNPAKTALDVTALSADQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAV 729

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++++ R      P E   +  DRA     V  E +  +  +L    P +  +++  L
Sbjct: 730 MELMNKLTR-----APLE---SEQDRA-----VMAEALSAVVRMLYPITPHICFELWKAL 776

Query: 478 F 478
            
Sbjct: 777 G 777


>gi|260912720|ref|ZP_05919206.1| leucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260633098|gb|EEX51263.1| leucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 860

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  TNKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++          +D  + T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMKNQLKILGFGFDWDREVTTCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P +   ++           G
Sbjct: 206 LDNLPLWPDQVKTMQRNWIGRSEG 229



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 21/189 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++          + NL
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNL 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V        K+       P A + + +S+     + + ++ +++  +   + A+A ++ L
Sbjct: 677 VFEY----NKNPAETAVEPTALSANQKSLRRDVHKTIAKVSDDIGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++++ +      P E    + DRA     +  E +  +  +L    P +  +++  L   
Sbjct: 733 MNKLTK-----APLE---NDQDRA-----IMAEALSSVIRMLYPITPHICFQLWKELG-N 778

Query: 481 DENRCFQSL 489
            E   F   
Sbjct: 779 KEAIDFAPW 787


>gi|127513857|ref|YP_001095054.1| leucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166231642|sp|A3QH47|SYL_SHELP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126639152|gb|ABO24795.1| leucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 863

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ESKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AINNKTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V   E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTASVNWCPNDETVLANEQVQDG----CCWRCDTQVVQKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +   E+   ++           G+     +  S ++FD     PD    + YV I A 
Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMTFQVEGSDQSFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 108/319 (33%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y                KA +W P D ++ G +    H +Y+  F        L
Sbjct: 496 FMESSWYYARYCSPKADQMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDIGL 555

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 556 VNSDEPAKRLLTQGMVLADAFYYTDDKGARVWVSPNDAKVTETDDKGRIVKAVDSQGHEL 615

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++        
Sbjct: 616 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPPELTLEWQESSVEGAHR--FI 673

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             +  L    VS        +     +   + + +     + + ++ ++++ +   + A+
Sbjct: 674 KRLWKLAHDHVS----QGPTVALNVASLDSAQKELRRELHKTIAKVGDDIERRQMFNTAI 729

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P    ++  DRA     +  E +  +  LL   +P  + +++
Sbjct: 730 ASVMELMNRLQK-----AP---MESEQDRA-----LMQEALCAVVRLLYPIIPHTSFELW 776

Query: 475 DILFVAD--ENRCFQSLDQ 491
             L   +  EN  +  +D+
Sbjct: 777 QALGHEETIENVLWPVVDE 795


>gi|218897179|ref|YP_002445590.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218541652|gb|ACK94046.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 1033

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIAKLRKHSTKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++++ G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVDKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPKETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +        ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNVAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHEVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I D++AR+  + G  V+   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIQKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|85000239|ref|XP_954838.1| methionyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302984|emb|CAI75362.1| methionyl-tRNA synthetase, putative [Theileria annulata]
          Length = 884

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 139/242 (57%), Gaps = 4/242 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++  ++++AIAY N  PH+GHAYE ++ DV++R++R+ G  V+F+TGTDEHG K+  
Sbjct: 288 LENKKPYHLASAIAYTNGLPHVGHAYEAVVCDVISRYYRMFGRRVIFSTGTDEHGIKVLT 347

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            A+    T     +  S  F+     L + YD FIRTT + H    + +W+ +  KGDIY
Sbjct: 348 TAKQQNKTPIEVCNYYSNEFKKFYKRLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIY 407

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
            G Y+G+YS+R+E +  + E               P   M E  YFF++  Y+ +L+ Y 
Sbjct: 408 LGEYNGYYSMREERFIPNTEAKLTD--FKDPVSGKPYDLMSESSYFFKMERYRTQLVDYI 465

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM--YVWIDALTNY 238
            ++ +FI P + +NE+++ +K  L DLS+SR +FDWGI++P     I+  YV  D    Y
Sbjct: 466 NTNQDFIYPKKVKNEILTRLKDQLDDLSISRTSFDWGIEVPSTDDIIITEYVNNDVNVGY 525

Query: 239 LT 240
             
Sbjct: 526 NH 527



 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 9/270 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K  ++ +++MYVW DAL+ Y+T++G       S+  +WP DL VIGKDI  F ++     
Sbjct: 591 KKQENEKHVMYVWFDALSFYMTSSG--LGESLSEMMYWPTDLQVIGKDISWFQSVILATM 648

Query: 279 LLSANLPLPKKVFSH-GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             S  LPL +K+ +H       G K+SKSLGNV++  E+++EVGV++ RY+L++    G 
Sbjct: 649 CFSMGLPLTRKILAHGFIQGSDGRKMSKSLGNVLNLDELLQEVGVESFRYYLLKSTVMGS 708

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +D++ LK+  N+DLA+ +GNLV R  S++ K  +G++P+  +  +S   ++      
Sbjct: 709 DVNFDQNQLKEMHNSDLADNVGNLVHRLTSLVTKYNEGVVPSYKSKVKSPFDLVEFMKDC 768

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
              + + +    I   +   +    +++ Y     PW   + N D+  +VL V +E +  
Sbjct: 769 SDNVLK-LDVYNIL--ILTNMKF-KDLNNYLTVTSPW--AEKNQDKRDSVLRVLLECVYF 822

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQ 487
           LA  L   +P+    +F  L    +   ++
Sbjct: 823 LAHFLYPVLPQSMEHLFSKLGTPQKQNVWE 852


>gi|27379586|ref|NP_771115.1| valyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81737134|sp|Q89LR8|SYV_BRAJA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27352738|dbj|BAC49740.1| valyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 958

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 19/281 (6%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
            + ++  W  +     +T G+ ++      +++P +  V G DI+ F    W A ++   
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPEDAP-EVQRYYPTNALVTGFDIIFF----WVARMMMMG 546

Query: 284 LPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L   K+V      +       KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+
Sbjct: 547 LHFMKEVPFSTIYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTLAAMAAQGR 606

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       ++     + A  + N  SR   M             A    +  I    +  
Sbjct: 607 DIKLATSRVEG--YRNFATKLWN-ASRFAEMNHCAVPEGFEPAKAKETLNRWIAHESAHT 663

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+ E ++    + A   +   V     D Y +  KP  L   +P +  T   +     
Sbjct: 664 TREVTEAIEAYRFNDAAGAIYRFVWNVYCDWYVELAKPVLLGPDSPAKDET-RAMVAWAR 722

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            ++  LL  F+P +  +++++   A  +         LKP 
Sbjct: 723 DEILKLLHPFMPFITEELWEV--TAKRDGLLALAAWPLKPA 761



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 23/174 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L RF R+ G DVL+  GTD  G       +  
Sbjct: 37  PFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQ 96

Query: 66  GVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
            +  +               V Q             + +    D S + F  T ++    
Sbjct: 97  LMERQQPGRREMGREKFLERVWQWKAESGDTIINQLKRLGASCDWSRERF--TMDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++ ++   G IYK      +  +     +D EV +            P++
Sbjct: 155 AVIKVFVELHRDGLIYKDKRLVNWDTKLLTAISDLEVQQTEVKGSLWYLRYPIE 208


>gi|145638258|ref|ZP_01793868.1| leucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272587|gb|EDK12494.1| leucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751412|gb|ADO81396.1| Leucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 861

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P++   ++           G
Sbjct: 206 LDPLPQWPDMVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 100/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADR 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +           +++ DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLESDQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|260578308|ref|ZP_05846224.1| valine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603610|gb|EEW16871.1| valine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 932

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 78/425 (18%), Positives = 137/425 (32%), Gaps = 39/425 (9%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IR   +         +  +   G   +   +    L ++ +   +E+ K   G    +  
Sbjct: 355 IRLALEEQGRIVARKFPYVHSVGHSERSKEAVEPRLSEQWFVKVEELAK-MSGDAIRSGD 413

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + +    +E  +F             +      +PI               +        
Sbjct: 414 SVIHPSSQEPRWFDWVDDMHDWCISRQLWWGHRIPIWYGPNGEIVCCGPDDEAPTGEG-- 471

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                     + ++  W  +     +T G+ +       KF+P  + V G DIL F    
Sbjct: 472 ------WYQDEDVLDTWFSSALWPFSTMGWPEKTP-ELEKFYPTSVLVTGYDILFFWVAR 524

Query: 275 WPAFLLSANLPLP---------------KKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
              F   A+   P               K +F HG +  + G K+SKSLGN IDP++ + 
Sbjct: 525 MMMFATFASKHTPEILGTGKDGRPQIPFKDIFLHGLVRDEHGRKMSKSLGNGIDPMDWVR 584

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G DALR+ L R    G D    +D  +   N   A  + N  ++   M       + P
Sbjct: 585 DYGADALRFTLARGANPGSDLPVGEDAAQSSRN--FATKLYN-ATKFALMNGARVGEL-P 640

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK---- 432
                T++D  IL     V Q + + +       A   +         D Y +  K    
Sbjct: 641 ARETLTDADRWILDRLEEVRQLVDDALDRYEFSLANENLYRFAWGEFCDWYLEIAKVQIP 700

Query: 433 -PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             W+        R      V   V+  +  LL   +P +   ++  L   +E    +SL 
Sbjct: 701 RDWDSATEEQVQRGIRTQIVLGRVLDSVLRLLHPAMPFVTETLWKALTDGEEGYS-ESLV 759

Query: 491 QRLKP 495
               P
Sbjct: 760 TADWP 764



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D +AR  R+ G +VL+  G+D  G      
Sbjct: 63  SDKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRKRMQGFEVLWLPGSDHAGIATQTK 122

Query: 62  AQNAGVTT-----------------KVFVDQN----SRNFRDMADVLDISYDDFIRTTEK 100
            +     T                   + DQ      R  R + D +D S + F  T + 
Sbjct: 123 VEANLKETEGKDRFDYGRDAFVGKVWEWKDQYGGVIQRQMRAIGDSVDWSRERF--TLDD 180

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 + ++K++ D G IY+      +S   +   +D EV    D
Sbjct: 181 GLSRAVQTMFKELFDAGLIYRANRMVNWSPVLQTAISDIEVVYSDD 226


>gi|170728031|ref|YP_001762057.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688645|sp|B1KDW0|SYL_SHEWM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169813378|gb|ACA87962.1| leucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 859

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNSSAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V   E   +F +++ Y D+LLS 
Sbjct: 150 YKKTASVNWCPNDETVLANEQVQDG----CCWRCDTEVVQKEIPQWFIKITDYADELLSD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +   E+   ++           G+     ++ S ++FD     PD    + YV I A 
Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMTFQVADSDESFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 106/319 (33%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 492 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDIGL 551

Query: 281 SANLPLPKKVFS--------HGFILHKG-------------------------------- 300
             +    K++ +        + +   KG                                
Sbjct: 552 VNSDEPAKRLLTQGMVLADAYYYTNEKGARVWVSPADVTVQETDDKGRTVKAVDSHGNEL 611

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++       A
Sbjct: 612 VYTGMSKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAAPPELTLEWQESSVEG------A 665

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           +     + +     +     +     +     + +     + + ++ ++++ +   + A+
Sbjct: 666 HRFIKRLWKVAHDHVAKGTTVSLDVKSLDAKQKELRRELHKTIAKVGDDIERRQMFNTAI 725

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++ + +      P    +T  DRA     +  E +  +  LL   +P  +  ++
Sbjct: 726 ASVMELMNRLQK-----AP---TETEQDRA-----LMQEALSAVVRLLYPIIPHTSFSLW 772

Query: 475 DILFVAD--ENRCFQSLDQ 491
             L   +  E+  +   D+
Sbjct: 773 KELGNEENIEDVRWPEADE 791


>gi|289804263|ref|ZP_06534892.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 259

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 13/254 (5%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           L  +  N++  + +SGL+   +SR    +G +IP+ P    YVW+DA   Y+ +   L +
Sbjct: 10  LQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCD 69

Query: 248 PDGS---KAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
             G      ++W  D      H IGKDI+ FH+++WPA L  ++   P  +F HG++   
Sbjct: 70  KRGDTTSFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVN 129

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGI 358
           G K+SKS G  I     ++    D+LRY+   +++    D   + +   +RVNAD+ N +
Sbjct: 130 GAKMSKSRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKV 189

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            NL SR+   I K +DG++    A   +D  +    +     I E  +++   +A+ +++
Sbjct: 190 VNLASRNAGFINKRFDGVL----AAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIM 245

Query: 419 SLVSEVDRYFDAQK 432
           +L    +RY D Q 
Sbjct: 246 ALADVANRYVDEQA 259


>gi|259907081|ref|YP_002647437.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96]
 gi|224962703|emb|CAX54158.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96]
 gi|283476882|emb|CAY72733.1| metG [Erwinia pyrifoliae DSM 12163]
          Length = 658

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 94/511 (18%), Positives = 181/511 (35%), Gaps = 31/511 (6%)

Query: 4   REKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ L IST    PN   H+GH     + AD+  R+  L G+     TG D++   +   A
Sbjct: 114 KDTLIISTP-PTPNGDLHLGHLSGPYLGADIYRRYLTLKGVSARHLTGRDDNQTYVKCIA 172

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYK 121
                  +   +  +          DI+ D F    T K ++     +  ++ D+G I+ 
Sbjct: 173 TKEQRPPEEVANDYADKIYQTWAKADIALDFFSSPQTTKNYYSRVNSIIGRLYDRGFIFA 232

Query: 122 GC----------------YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
                             Y         +  + +   +           NPV  + E   
Sbjct: 233 KEVDELYDLNTGFSLHEGYIKGVCPHCHSASDGNACEQCGRPNDCADLINPVASLPETRV 292

Query: 166 FFRLSAYQDKLLSYYESH-----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI-- 218
             R +      LS              +    R      +  GL D+ +S ++ DWGI  
Sbjct: 293 GTRTTTKLYFRLSALAPQLTELTFRSNMSARARELTQGMLSDGLPDICISHRS-DWGISV 351

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            IP     ++YVW +    YL     L   D          +H  G D   +H + +PA 
Sbjct: 352 DIPGFEDQVLYVWFEMAAGYLAADEDLHPQDPFFKNKNCDIIHFYGFDNTYYHTLLFPAI 411

Query: 279 LLSANLPL--PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             + +     P     +  +  +GEK S S  ++I   +++ ++ VD +R+ L R     
Sbjct: 412 YYALDEEYNVPVNHVINELLYLRGEKFSTSRRHLIWASKLLSKIPVDYVRWGLARSRPEM 471

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            +  +  +     +N    + +   ++ S   +   + G +P PGA+T    +       
Sbjct: 472 TNENFSLEPFVDAINDFFVSTLQQHLTTSCRELSLQFQGKVPEPGAWTSQHAAFYQRIRN 531

Query: 397 VLQEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           + +++             A A++  +     ++F+AQ   E +    D   T   +    
Sbjct: 532 LARDVEHAYHIDAFSPQTATAKLEEMGILTRKFFNAQSKHETQPMLRDYQRTTFALNFWA 591

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRC 485
           I+Q ++L Q  + + +  I  +L +  E   
Sbjct: 592 IKQFSLLSQPIMLEGSEYILKLLGLNFEGWD 622


>gi|91977051|ref|YP_569710.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683507|gb|ABE39809.1| valyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 968

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 9/262 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D       +++P ++ V G DI+ F    +        
Sbjct: 508 DEDVLDTWFSSALWPFSTLGWPDETS-ELERYYPTNVLVTGFDIIFFWVARMMMMGLHFK 566

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D   
Sbjct: 567 NDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDIKL 626

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N   R   M             A    +  I     R ++++
Sbjct: 627 ASSRVEG--YRNFATKLWN-ACRFAEMNACAAPIGFDYTTAKETLNRWIAHETVRAVRDV 683

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E +++   + A       V     D Y +  KP  L   +    +    +      ++ 
Sbjct: 684 TEAIESYRFNDAAGAAYRFVWNVYCDWYLELAKP-VLMGEDSTAKTETRAMVAWARDEIL 742

Query: 460 ILLQAFVPKLANKIFDILFVAD 481
            LL  F+P +  +++ +    D
Sbjct: 743 KLLHPFMPFITEELWAVTGQRD 764



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GHA    + D+L RF R+ G DVL+  GTD  G      
Sbjct: 49  RDAEPYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMV 108

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +   +  +               V Q             + +    D S + F  T ++
Sbjct: 109 VERQLMERQEPGRREMGRAKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDE 166

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++ ++  +G IYK      +  +     +D EV +            P++
Sbjct: 167 GLSRAVVKVFVELHRQGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGNLWHLRYPIE 224


>gi|295689026|ref|YP_003592719.1| valyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430929|gb|ADG10101.1| valyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 907

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 114/355 (32%), Gaps = 43/355 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L   ES      P         +++  ++   +SR+   W
Sbjct: 372 IEPFLTDQWYVDAKTLAQPALKAVESGETVFEPKHWEKTYFEWLR-NIEPWCVSRQ-LWW 429

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 430 GHRIPAWFGPDGAIFVEETEEAAYAAAKAQFGENVVLTQDEDVLDTWFSSALWPFSTLGW 489

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      AKF+P    V G DI+ F    +           P  +   +      KG K
Sbjct: 490 PEKTA-DLAKFYPTSTLVTGFDIIFFWVARMMMMGIHFMGEAPFKQVFINALVRDEKGAK 548

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +I+E+G DA+R+ L       +D    K  ++     +    + N  
Sbjct: 549 MSKSKGNVMDPLILIDELGCDAVRFTLTAMSGQARDIKLSKQRIEG--YRNFGTKLWN-A 605

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           SR   M                  ++ I     + + E+ + ++      A   +   V 
Sbjct: 606 SRFAQMNECVRVEGFDPATVQQPINKWIRGETVKTVAEVTKALEAPSFDEAAGALYRFVW 665

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               D Y +  KP  L   +    +         +  +  LL   +P +  +++ 
Sbjct: 666 NVFCDWYLELAKP-ILNGDDAAAKAETRATAAWALDVILKLLHPVMPFITEELWQ 719



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 24/170 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA    + DVL RFHR+ G   L+  GTD  G       + 
Sbjct: 34  EPFVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTDHAGIATQMVVER 93

Query: 65  AGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +       +   R +    D S + F  T ++   
Sbjct: 94  QLAAAGNIGRRDMGRDAFVAKVWEWKAESGGAITNQLRRLGASCDWSRERF--TLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNA 152
              R ++ ++  +  +Y+      +  + +   +D EV +   DG Y++ 
Sbjct: 152 AAVRKVFVQLYKQNLLYRDKRLVNWDPQFQTAISDLEVEQKEVDGAYWHF 201


>gi|326388332|ref|ZP_08209928.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207064|gb|EGD57885.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 954

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/379 (20%), Positives = 139/379 (36%), Gaps = 56/379 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +    S    I+P        ++++  ++   +SR+   W
Sbjct: 438 IEPWLTDQWYVDAETLAKAPIEAVRSGAIEIVPKSWEKTYFNWME-NIQPWCVSRQ-LWW 495

Query: 217 G--IKIPDDPQYIMYV--------------------------WIDALTNYLTTTGYLDNP 248
           G  I    D +  +YV                          W  +      T G+ D  
Sbjct: 496 GHRIPAWYDDKGGIYVAETEEEAQALAGEGVVLSRDEDVLDTWFSSALWPFATLGWPDED 555

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEK 302
               A+ +P DL V G DIL F    W A +    L   K+V      LH       G+K
Sbjct: 556 APLLARHYPNDLLVSGFDILFF----WCARMAMQGLHFMKEVPWRRLYLHGLVRAADGQK 611

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP+ +I++ G DALR+F+    + G+D   D+  ++     + A  + N  
Sbjct: 612 MSKSKGNVVDPLGLIDKYGADALRFFMCAMESQGRDVKMDERRVEG--YRNFATKLWN-A 668

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R            +  P A +  +  I+      L  + + M +     A   V     
Sbjct: 669 ARFCQSNGIGASSSLAAPVATSAVNRWIIGEVVETLATLDQAMTDLRFDAAAQAVYRFAW 728

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +   D Y +        K N D  +    V   V+ Q+ ++L  F+P +  +++  L   
Sbjct: 729 DTFCDWYIE------FIKGNFD--AETKAVAGWVLDQILVMLHPFMPFVTEELWHALGER 780

Query: 481 DENRCFQSLDQRLKPGFML 499
           + +       +   PG  +
Sbjct: 781 ETDLILARWPE---PGAAV 796



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 18/170 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------ 59
              I           HIGHA +  + DV+ R+ RL G D L+  GTD  G          
Sbjct: 99  PFTIVNPPPNVTGSLHIGHALDNTLQDVVIRYERLRGKDALWVVGTDHAGIATQMVVERQ 158

Query: 60  ---KAAQNAGVTTKVFVDQNSRN-------FRDMADVLDISYD--DFIRTTEKRHHDTCR 107
              +  +    + + FV +                  L  S D      T +        
Sbjct: 159 MEAQQDKRTNYSREDFVAKVWEWKAQSGGTITRQLRRLGCSMDWSREQFTMDPHFTRGVV 218

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  + ++G IY+      +  R +   +D EV        +     P+
Sbjct: 219 KVFVDLYNEGLIYRDKRLVNWDPRLKTAISDLEVETREVKGGFWHFRYPL 268


>gi|319897592|ref|YP_004135789.1| leucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433098|emb|CBY81472.1| leucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 861

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++    ++      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTLVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +            +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|260581747|ref|ZP_05849544.1| leucyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095340|gb|EEW79231.1| leucyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 861

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 100/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSEEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++    ++      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTLVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +      P     +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK-----AP---LDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|153864441|ref|ZP_01997343.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS]
 gi|152146065|gb|EDN72658.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS]
          Length = 407

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 19/273 (6%)

Query: 245 LDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
            D        FW  D      H IGKDI  FH ++WPA L +     P  VF HGF+   
Sbjct: 31  CDREHLDFESFWGKDSQAELYHFIGKDIQYFHCLFWPAMLTAGGFRNPTAVFVHGFLKVD 90

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDKDGLKKRVNADLANGI 358
           GEK+SKS G  I+    +  +  + LRY+   ++     D   + D    RVNADL    
Sbjct: 91  GEKMSKSRGTFINARTYLNYLKPEYLRYYFAAKLGYGVDDVDLNLDDFLHRVNADLVGKF 150

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N+ SR    I   ++G + +        +  +   +     I E  + +  ++A+  ++
Sbjct: 151 VNIASRCAKFITNRFEGQLASELVEPALYQHFIDEGNA----IAEAYETRDYNKAVRHIM 206

Query: 419 SLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +L    ++Y +  KPW + K          V    + + R L   L   +P L +K+ D 
Sbjct: 207 ALADRANQYIEEHKPWVIAKQAGQEAELQGVCSQGLNLFRVLMGYLAPILPLLTSKVEDF 266

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           L      +    L   +KP       F P+  R
Sbjct: 267 LAAPITWQPEPLLAHTIKP-------FKPLMLR 292


>gi|148828098|ref|YP_001292851.1| leucyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166231612|sp|A5UI62|SYL_HAEIG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148719340|gb|ABR00468.1| leucyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 861

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSEEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +      P     +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK-----AP---LDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|145632299|ref|ZP_01788034.1| leucyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229844024|ref|ZP_04464165.1| leucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|144987206|gb|EDJ93736.1| leucyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229813018|gb|EEP48706.1| leucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 861

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDALPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSEEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWISPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +            +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|145641886|ref|ZP_01797460.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273365|gb|EDK13237.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 861

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +      P     +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK-----AP---LDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|78186274|ref|YP_374317.1| valyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|78166176|gb|ABB23274.1| valyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 901

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 77/389 (19%), Positives = 140/389 (35%), Gaps = 49/389 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F ++    +K L           P    N         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVKMQPLAEKALQVVNDGEIRFHPPHWINT-YRHWMENIQDWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I     P                           ++  W  +    LTT G+     
Sbjct: 421 GHRIPAWYGPDGQVWVADSYDEACRLAGTDKLVQDEDVLDTWFSSWLWPLTTLGWTGPKS 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            ++    F+P D  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 481 DNEDLRAFYPTDTLVTGPDIIFFWVARMIMAGMYFKGDVPFRDVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ ++     G+D  + ++  +  +  + A  I N  SR 
Sbjct: 541 SLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEEKCE--LGRNFATKIWN-ASRL 597

Query: 366 VSM-----------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           V M             + Y+G  P+  +F  +   ILS  + +L+          ++  +
Sbjct: 598 VFMQREKHFEGPEDFARYYEGFDPSLESFDMAGRWILSSYNAMLERYHAAFAQFRMNDIV 657

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y +A K    +  +P  A   + + V V+      L   +P + ++
Sbjct: 658 KTVYEFFWGDYCDWYLEALKVTLAEGCSPVDARKAVALAVHVLEGSLKALHPVMPFITDE 717

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHK 501
           I+  +      +   S +  +     + +
Sbjct: 718 IWHSVLPRPATQSIASSEMPVPAAAPVAE 746



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   +            +GH     + D+  R+ R+ G + L+  GTD  G      
Sbjct: 44  EGRKPYSVLMPPPNVTGSLTLGHVLNHTLQDIFIRYSRMTGKEALWLPGTDHAGIATQTV 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++           L IS D    + T ++R  
Sbjct: 104 VERKLRKDGISRHDLGRKDFLTHVWQWREEYGGLILKQLRRLGISCDWRRNLFTMDERAS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     +  +   G IY+G     +    +   +D+EV  
Sbjct: 164 EAVINAFIALYRDGLIYRGKRIINWCPVSQTALSDEEVIM 203


>gi|152996926|ref|YP_001341761.1| leucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189030284|sp|A6VZE7|SYL_MARMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150837850|gb|ABR71826.1| leucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 815

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  SSKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +     L   Y  D  I T    ++   +  + ++ +KG  
Sbjct: 90  AIKHKTAPAKWTTENIAYMKGQLKELGFGYDWDREIATCTPEYYKWEQWFFTQLVEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F R++ Y ++LL+ 
Sbjct: 150 YKKTAAVNWCPEDQTVLANEQVEDG----CCWRCGTNVEKKEISQWFIRITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 206 LDQLDGWPEKVKAMQRNWIGRSEGL 230



 Score =  119 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 115/278 (41%), Gaps = 41/278 (14%)

Query: 232 IDALTNYLTTTGYLDN---PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y       D+       +A +W P D +V G +    H +Y   F         
Sbjct: 493 FMESSWYFARYCCPDSTDAMLTEEANYWLPVDQYVGGVEHAILHLLYSRFFHKLLRDAGL 552

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++++ P  K++ + G +   G K+SKS GN +DP E+IE+ G D +R F++      +  
Sbjct: 553 VNSDEPF-KRLLTQGMVNKDGTKMSKSKGNTVDPQEMIEKYGADTVRLFMMFSAPPEQSL 611

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSR 396
            ++  G+         +G    + R  ++  +  +              + +++      
Sbjct: 612 EWNDAGV---------DGASRFLRRLWALSYRHTNAGKVGELNIAELNGAQKALRRKTHE 662

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +Q++ ++++ +   + A+A V+ L +E+ ++            +       L V  E +
Sbjct: 663 TIQKVSDDIERRQTFNTAIAAVMELCNEISKF-----------EDSSELG--LAVEQEAL 709

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
               +LL   VP +A++++  L  +D   N  + +LD+
Sbjct: 710 EAATLLLSPIVPHIAHQLWSELGHSDNIVNTPWPTLDE 747


>gi|68249507|ref|YP_248619.1| leucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336066|sp|Q4QLY8|SYL_HAEI8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68057706|gb|AAX87959.1| Leucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 861

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDALPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++    ++      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTLVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +            +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|154248157|ref|YP_001419115.1| valyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154162242|gb|ABS69458.1| valyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 930

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 125/385 (32%), Gaps = 63/385 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L+         +P         +++  ++   +SR+   W
Sbjct: 376 IEPWLTDQWYVDAKTLAQPALAAVREGRTAFVPKNWEKTYFEWLE-NIQPWCISRQ-LWW 433

Query: 217 G--IKIPDDP-------------------------------------------------Q 225
           G  I    DP                                                 +
Sbjct: 434 GHQIPAWYDPFGNVFVAMDEDEAFEQAIAHNVGNETLSPEGAQALIDDADRRAGFLTRDE 493

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSA 282
            ++  W  +     +T G+ D     K KF+P  + V G DI+ F     +      +  
Sbjct: 494 DVLDTWFSSALWPFSTMGWPDETAELK-KFYPTSVLVTGFDIIFFWVARMMMMGLHFMDG 552

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            +P             KG K+SKS GNVIDP++++E+ G DALR+ L    A G+D    
Sbjct: 553 EVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADALRFTLAAMAAQGRDIKLA 612

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              ++     + A  + N V  +        +G  P     T  +  I+   +R   E+ 
Sbjct: 613 TSRVEG--YRNFATKLWNAVRFAQMNGCVRVEGFDPAKVEGT-LNRWIIGEAARATAEVS 669

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           E +     + A A +   +     D + +  KP  L   +          T  V+     
Sbjct: 670 EAILAYRFNEAAAAIYRFLWNVFCDWHLELAKP-LLSGPDGPAKDETRATTAYVLDVAMA 728

Query: 461 LLQAFVPKLANKIFDILFVADENRC 485
           LL  F+P L  +++         R 
Sbjct: 729 LLHPFMPFLTEELWAETGKDGPART 753



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E   I           H+GHA    + DVLARF R+ G DVL+  GTD  G      
Sbjct: 33  KDAEGFSIVIPPPNVTGSLHMGHALNNTLQDVLARFERMRGKDVLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     KV+  +           + +    D S + F  T ++
Sbjct: 93  VERQLSAQKLPGRRDMGRVAFVEKVWAWKAESGGTIVNQLKKLGASCDWSRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                   ++ ++  +G IYK      +  + ++  +D EV              P++  
Sbjct: 151 GLSRAVLKVFVQLYREGLIYKDKRLVNWDPKFQSAISDLEVLPVEVKGNLWHLRYPIEGE 210

Query: 161 EEE 163
           ++ 
Sbjct: 211 KDR 213


>gi|229121748|ref|ZP_04250969.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228661664|gb|EEL17283.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
          Length = 1033

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 136/360 (37%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDYMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECERC---DHQFAPKSIADLRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P                   +       G  +   P+ ++ VW D+ +       
Sbjct: 478 SMKETPE-------DLELHKPYVDEVQVCCEKCGSTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++E+ G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVEKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       +V+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|196033846|ref|ZP_03101257.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|228945806|ref|ZP_04108152.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|195993526|gb|EDX57483.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|228813871|gb|EEM60146.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 1033

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 135/360 (37%), Gaps = 20/360 (5%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                 ++   +    E     +         P+   E E        +  K ++    H
Sbjct: 421 TWYPDYMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECERC---DHQFAPKSIADLRKH 477

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
                P                   +       G  +   P+ ++ VW D+ +       
Sbjct: 478 SMKETPE-------DLELHKPYVDEVQVCCEKCGSTMNRTPE-VIDVWFDSGSMPFAQYH 529

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD+   G D     F+++   + L +  +P  + +     +  +G+
Sbjct: 530 YPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQ 589

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN +DP++++ + G DALR+ L+ + A      + +  + +   +   + + N+
Sbjct: 590 KMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SKFVDTLVNV 648

Query: 362 VSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            S   +   L +Y+         T+ DE +LS      +++R  + +     A  ++ +L
Sbjct: 649 YSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAAL 708

Query: 421 VSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V EV + Y      + WE    N ++A+       +V+  ++ L+  F P +A  I   L
Sbjct: 709 VDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|16272858|ref|NP_439081.1| leucyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580010|ref|ZP_05847840.1| leucyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174531|sp|P43827|SYL_HAEIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1573943|gb|AAC22581.1| leucyl-tRNA synthetase (leuS) [Haemophilus influenzae Rd KW20]
 gi|260093294|gb|EEW77227.1| leucyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 861

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSEEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +            +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|210622352|ref|ZP_03293121.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
 gi|210154340|gb|EEA85346.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
          Length = 1039

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 155/411 (37%), Gaps = 32/411 (7%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  Y     L+D+   N++ V    +        N ++  E + +    S Y    
Sbjct: 402 YYAKPSWYIEMTKLKDQLIANNNTVNWYPEFVGQGRFGNWLE--ELKDWAISRSRYWGTP 459

Query: 177 LSYYESHPEFILPIERRNE--VISFVKSGLKDLSLSRKTF---DWGIKIPDDPQ----YI 227
           L  +         +  R E   ++  +     + L R               P      +
Sbjct: 460 LPMWRCECGNTESVGSRQELADMAVEEVDPATVELHRPYVDEIHLKCPKCGKPMTRVKDV 519

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           +  W D+ +       Y      +  + +PAD    G D     F+++   +  +    P
Sbjct: 520 IDCWFDSGSMPFAQHHYPFENKENFDQLFPADYICEGIDQTRGWFYSLLAISTFVMGKAP 579

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               + +   +   G+K+SKS GN ++P E+ ++ G DALR++L+          +D++G
Sbjct: 580 YKNVLVNDLVLDKDGKKMSKSRGNTVNPFELFDKYGADALRWYLLYVSPPWTPIRFDEEG 639

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           LK+   +     + N+ +     +  + D + P          +E D  ILS  + +  E
Sbjct: 640 LKEVQ-SKFVGTMKNVYNFFT--LYANTDNINPGDFFVEYKDRSELDRWILSKFNNLKAE 696

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           I EN++   +++ + ++   +++   + Y    +    +    +    V   T E++ +L
Sbjct: 697 IEENLEIFEVNKTIRRIQEFINDDLSNWYIRRSRRRFWEPELTEDKKAVYNTTYELLTEL 756

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQS--------LDQRLKPGFMLHK 501
             ++  F P L+ +++  L   +E+    S        LD++L+    L K
Sbjct: 757 CRVVAPFAPYLSEEMYRNL-TGEESVHLASYPRCNKELLDEKLEEKMDLVK 806



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           +              N  P I H     + D + R+  + G  V    G D HG  +  +
Sbjct: 37  QNDPSFVFFEGPPTANGNPGIHHVVARTLKDWVCRYKTMSGYQVKRKAGWDTHGLPVEIQ 96

Query: 61  AAQNAGVTTKVFVDQN-SRNFRDMADVLDISY-----------------DDFIRTTEKRH 102
             +  G++ K  ++      F D       S+                 D+   T +  +
Sbjct: 97  VEKELGLSDKQAIEDYGIAEFCDKCRDSVFSFEKQWRNMTERMAYEVDLDNPYITLDNNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +  K + +G +Y+G     Y  R        EV +G  
Sbjct: 157 IESVWWILNKFNKEGYMYEGHKILPYCPRCGTGLASHEVAQGYK 200


>gi|91763307|ref|ZP_01265271.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717720|gb|EAS84371.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 875

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 130/379 (34%), Gaps = 43/379 (11%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E  +   E        Y +  ++ ++    E +F        K      S      P  
Sbjct: 324 KEKEFFVKEENIKNKVPYGDRSNSIIEPFLTEQWFVDAKKLSIKAKDIVNSKKTNFFPAN 383

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY----------------------- 226
             ++      + ++   +SR+   WG  I     P                         
Sbjct: 384 W-SKTYFQWMNNIEPWCISRQ-LWWGHQIPAWYGPDKKIFVAINEEEAKLDAKKFYNKDV 441

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                  ++  W  +      T G+ DN +    KF+P  + V G DI+ F    +    
Sbjct: 442 DLIRDPDVLDTWFSSGLWPFATLGWPDNKEYVD-KFYPTSVLVTGFDIIFFWVARMIMFG 500

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P             KG+K+SKS GNVI+P+++IE+   DALR+ L+   + G 
Sbjct: 501 MEFLDKEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIEKYSADALRFTLLSMASPGT 560

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D    +D +K     +  N + N  +  +     D+  +   P      ++ I +     
Sbjct: 561 DVKLSEDRVKG--YRNFLNKLWN-ANNFLITNNCDFSKIDEKPILSININKWIYAELIET 617

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             +I +N+++     A             D Y +  K   L   +      +  V+  V 
Sbjct: 618 KNKIEKNLKDYRFDEAAKNAYQFTWHSYCDWYLELSKT-ILFSEDEKAKDEIRQVSAYVF 676

Query: 456 RQLAILLQAFVPKLANKIF 474
           +Q+ ILL  F+P +  +I+
Sbjct: 677 KQILILLHPFIPFVTEEIW 695



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 20/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++  +           H+GHA    I D+L R+HR++  + L+  GTD  G      
Sbjct: 29  KNKKQFSVVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTDHAGIATQAL 88

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRH 102
            +                        + +++     +    L  S D + R   T ++  
Sbjct: 89  VEKKLTADGIDKNEIGREKFIEKVWEWKEEHGDIILNQLKKLGCSCD-WSRNAFTMDENL 147

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             +   ++ ++  KG IYK      +    +   +D EV +            P++
Sbjct: 148 SKSVLKVFVELHKKGLIYKDKKLVNWDTVLKTAISDLEVDQREVNSKIYYIQYPIE 203


>gi|322834559|ref|YP_004214586.1| valyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169760|gb|ADW75459.1| valyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 951

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 78/417 (18%), Positives = 143/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGNVFVGRDEAEVRSENNLGADVVLTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                KA   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPDLKAFH-PSSVVVSGFDIIFFWIARMIMMTMHFVKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D  +    
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGLNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE M N     A + +         D Y +  KP  +  
Sbjct: 668 LELSLADRWILAEYNRTVKSYREAMDNYRFDLAASILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +     +  VEV+  L  L    +P +   I+  +     +  E    Q   +
Sbjct: 727 GNEAQLRGTRHTLVEVLEGLLRLAHPIIPFITETIWQRVKSLKGITAETIMLQPFPE 783



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFAIMIPPPNVTGSLHMGHAFQQTIMDAMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + D +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFINKIWDWKAESGGTITRQMRRLGDSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              D  R ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSDAVREVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 204


>gi|315500119|ref|YP_004088922.1| valyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418131|gb|ADU14771.1| valyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 938

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 10/274 (3%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                      +++  D   ++  W  +     +T G+ +       +F+P    V G D
Sbjct: 489 WKDGTNNILERVELRQDED-VLDTWFSSALWPFSTMGWPEQTR-DLERFYPTHTLVTGFD 546

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+ F    +       +   P  +   +      KG+K+SKS GNV+DP+ +I+E G DA
Sbjct: 547 IIFFWVARMMMMGLHFTGKAPFQRVFINALVRDEKGQKMSKSKGNVMDPLVLIDEFGADA 606

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L      G+D    K  ++     +    + N    +         G  P+    T
Sbjct: 607 LRFTLSAMSGQGRDIKLAKQRIEG--YRNFGTKLWNAHRFAQMNECAAVAGFDPSSVKLT 664

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
            S   I     + ++ + E ++      A   +   V     D Y +  KP  L   + +
Sbjct: 665 LS-RWIRGETHKTVKIVTEALEACAFDDAANALYKFVWNVVCDWYVELSKP-ILNGEDAE 722

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + +  +T  V+ Q  ILL   +P +  +++  
Sbjct: 723 AKAEIRAMTAWVLDQCLILLHPVMPFITEELWAA 756



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 55/169 (32%), Gaps = 24/169 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------ 59
              I           HIGHA    + DVL RF R+ G   L+  GTD  G          
Sbjct: 35  PFSIVIPPPNVTGSLHIGHALNNTLQDVLMRFERMRGKAALWLPGTDHAGIATQMVVERQ 94

Query: 60  --------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                         +A        K           R +    D S + F  T ++    
Sbjct: 95  LAAAGNVGRRDMGREAFVEKVWQWKAESSGTIQGQLRRLGASCDWSRERF--TLDEGLSA 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNA 152
             R ++ ++  +G IY+      +    +   +D EV +   DG Y++ 
Sbjct: 153 AVRKVFVQLYKEGLIYRDKRLVNWDPHFQTAISDLEVEQKEVDGHYWHF 201


>gi|296394167|ref|YP_003659051.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181314|gb|ADG98220.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 902

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 132/380 (34%), Gaps = 48/380 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F +  +          S    I+P         +    ++D  +SR+   
Sbjct: 355 PVEPRLSLQWFVKTESLAKAAGEQVRSGAMPIVPEGLAARWFEWTD-NMRDWCVSRQ-LW 412

Query: 216 WG--IKIPDDP--------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I +   P                    + ++  W  +      T G+ +      A
Sbjct: 413 WGHRIPVWYGPAGEVRCFGHDEEIPEGWTQEEDVLDTWFSSGLWAFATLGWPEETP-ELA 471

Query: 254 KFWPADLHVIGKDILRFHAIYW---------------PAFLLSANLPLPKKVFSHGFILH 298
            F+P  L V G DIL F A+                  A    A  P  +  F       
Sbjct: 472 AFYPVSLLVTGYDILFFWAVRMAMFGGWASRAGQSAAQAQRPLAQAPFRQLWFHGLVRDE 531

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG+K+SK+ GNVI+P++ ++  G DA R+ L+R +  G D    +       N      +
Sbjct: 532 KGQKMSKTKGNVINPLDWLDRFGADATRFALLRGVVPGSDVPLGESNAIAARN--FVTKL 589

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N    ++     D  G  P   + TE+D  IL     V  E    ++     +A   + 
Sbjct: 590 FNATRFALLSGASDGFGSDPAHASLTEADRWILGRLEAVRAETDSALEAGEFAKAAQALY 649

Query: 419 SLVSE--VDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               +   D Y +  K  +L       D A     V   V+  L  LL   +P + + ++
Sbjct: 650 QFTWDEFCDWYLEIAK-LQLSGAVGAGDNAHGTRAVLARVLDTLLRLLHPIMPFVTDMLW 708

Query: 475 DILFVADENRCFQSLDQRLK 494
             L  + E    Q+  ++L 
Sbjct: 709 RSL-ASGETLATQAWPEQLP 727



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K  I           H+GHA E  + D + R  R+ G +VL+  G D        A
Sbjct: 35  SEKPKFSIVVPPPNVTGNLHVGHAMEHAVMDAVCRRKRMQGFEVLYLPGFDHASIATQAA 94

Query: 62  AQN-------------------AGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKR 101
            +                         K  V  N     R + D +D S + F  T +  
Sbjct: 95  IERQLADEGTNRHELGREAFLARAFAWKEEVRGNISAQMRRLGDSVDWSRERF--TMDDG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G +Y+      +S +     +D EV  
Sbjct: 153 MVKAVRTIFKQLFDAGLVYQAERLVNWSPKQRTAISDAEVVH 194


>gi|126697211|ref|YP_001092097.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126544254|gb|ABO18496.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 918

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 137/368 (37%), Gaps = 21/368 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              +    +  Y +   N   W      ++        +L   +   E   P        
Sbjct: 390 PSFIPPRWEKVYKDWLENINDWCISRQLWWGHQIPAWYVLDESQDSIEQNTP-------Y 442

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++    L  + K F   IK+  D   ++  W  +     +T G+ +  D    K++P
Sbjct: 443 IVARNEEDALIEANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYP 501

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V G DI+ F    +       + N+P               +K+SKS GN IDPI 
Sbjct: 502 NSVLVTGFDIIFFWVARMTMMGNTFTNNIPFKDVYIHGLVRDENNKKMSKSSGNGIDPIL 561

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSV--S 367
           +I++ G DALR+ L+RE+A  G+D   D D  K        + + AN + N     +   
Sbjct: 562 LIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVLINK 621

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
               +Y        +    D+ ILS  ++V  ++   ++   +  +   +         D
Sbjct: 622 TSNNNYSFNESDENSLELCDKWILSKLNQVNIKVTALLKEYKLGESAKLLYEFTWNDFCD 681

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K     K   +R      V ++V+  + +++  F+P +  +++ +L +  +N  
Sbjct: 682 WYVEFAKQRFNNKETKNR-QISEKVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNAL 740

Query: 486 FQSLDQRL 493
                  +
Sbjct: 741 LSLQKWPI 748



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +           H+GHA+   + DV+ RF RL G +VL   GTD     +    
Sbjct: 39  DGESFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTIL 98

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                   + +Q+          +  S D      T +++ ++
Sbjct: 99  EKQLKSEGKTSEDIGRDEFLKRAWNWKEQSGGRIVSQLKRIGYSVDWTRERFTLDQKLNE 158

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  +  K  IY+G Y   +    ++  +D EV       +      P+
Sbjct: 159 AVIEAFNILYKKNLIYRGEYLVNWCPESQSAVSDLEVEMQEVNGHLWHFKYPL 211


>gi|145634089|ref|ZP_01789800.1| leucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|148826435|ref|YP_001291188.1| leucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845972|ref|ZP_04466084.1| leucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166231611|sp|A5UDF4|SYL_HAEIE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145268533|gb|EDK08526.1| leucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|148716595|gb|ABQ98805.1| leucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810976|gb|EEP46693.1| leucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|309973583|gb|ADO96784.1| Leucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 861

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A +   + +     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +            +  DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLDSEQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESAID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|299133850|ref|ZP_07027044.1| valyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591686|gb|EFI51887.1| valyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 956

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D+      +++P  + V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDDEK-DVRRYYPTSVLVTGFDIIFFWVARMMMMGLHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I++ G DALR+ L    A G+D   
Sbjct: 551 NDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLHLIDDYGADALRFTLAAMAAQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N  SR   M   +              +  I    SR   E+
Sbjct: 611 STQRVEG--YRNFATKLWN-ASRFAEMNGCELAKGFDATQCKETLNRWIAHETSRATHEV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E ++    + A   +   V     D Y +  KP  L   + +              ++ 
Sbjct: 668 TEAIRAYRFNDAAGAIYRFVWNVYCDWYLELAKP-ALTGPDSEAKRETQAAVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P +  +++
Sbjct: 727 KLLHPFMPYITEELW 741



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 55/178 (30%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GHA    + D+L RF R+ G DVL+  GTD  G      
Sbjct: 33  RDAEPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +      K               V Q             + +    D S + F  T ++
Sbjct: 93  VERQLAERKEPSRRDMGREKFLERVWQWKAESGGIIVNQLKRLGASCDWSRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++  +   G IYK      +  +     +D EV +            P +
Sbjct: 151 GLSRAVAKVFVALHRDGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGNLWHLRYPYE 208


>gi|254448566|ref|ZP_05062025.1| leucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261755|gb|EDY86041.1| leucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 860

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     A
Sbjct: 28  TSKESYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L  +YD      T +  ++   +  + ++ +KG +
Sbjct: 88  AIKNQTAPAKWTYENIDYMRGQLKRLGFAYDWKREFATCDPDYYRWEQWFFTQLYEKGLV 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V +G           PV+  +   +F +++ Y  +LL  
Sbjct: 148 YKKTSAVNWCPHDQTVLANEQVIEG----CCWRCDTPVERRKIPQWFIKITDYAQQLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 204 LDQLDGWPDQVKAMQRNWIGRSEG 227



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 78/194 (40%), Gaps = 22/194 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N +DP  +IE+ G D +R F++ ++   +   +   G+K       AN   N
Sbjct: 618 SKMSKSKNNGVDPQSMIEQYGADTVRLFMMSDVPPEQSLAWSDQGVKG------ANRFVN 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
              + +   L   D          ++ +S+  +  + + ++  ++ +    + ALA    
Sbjct: 672 RFWQVIQEHLAKGDVSALKTDQLDKNQQSLYQLLHQTIDKVSNDVSERYAFNTALAANRE 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + + R+            + ++   V      V+  +  +L   +P LA  +++ +  
Sbjct: 732 LFNALTRF----------DDDSEQGLAVQRA---VVDAMLRMLSPIIPHLAQALWEQMGY 778

Query: 480 ADE--NRCFQSLDQ 491
                +  +  +D+
Sbjct: 779 EGWIVDAAWPQVDE 792


>gi|319775147|ref|YP_004137635.1| leucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329122935|ref|ZP_08251506.1| leucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317449738|emb|CBY85945.1| leucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471866|gb|EGF17306.1| leucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 861

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDNLPQWPDMVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 102/305 (33%), Gaps = 72/305 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLGRVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    ++         A + + +++     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 VYQYQQNPAKTSLDITALSATQKALRREVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +           +++ DRA     V  E +  +  +L    P +  +++  L       
Sbjct: 737 TK--------ASLESDQDRA-----VMAEALSAVVRMLYPITPHICFELWQALGNESNID 783

Query: 485 CFQSL 489
             + +
Sbjct: 784 TAEWV 788


>gi|325000617|ref|ZP_08121729.1| valyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 878

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/359 (20%), Positives = 132/359 (36%), Gaps = 41/359 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +    P++      +F                    + P E+      +V   + D +
Sbjct: 352 HCSRTQVPIEPRLSLQWFVSTGPLARAAGDAVREGRTVLHPKEQEKRFFDWVD-NMHDWT 410

Query: 209 LSRKTFDWG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGY 244
           +SR+   WG  I +   P                        ++  W  +     +T G+
Sbjct: 411 ISRQ-LWWGHRIPVWYGPAGEVVCVGPDEEPPTGEGWRQDSDVLDTWFSSGLWPFSTLGW 469

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEK 302
            D        ++P  + V G DIL F  +    F   A    P + V+ HG I  + G+K
Sbjct: 470 PDETP-DLEHYYPNSVLVTGYDILFFWVVRMMMFGTYAMGETPFRDVYLHGLIRDEHGKK 528

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP++++E+ G DALR+ + R    G D     + +    N      + N+ 
Sbjct: 529 MSKSKGNVIDPLDLMEDYGADALRFTIARGSNPGTDMSLSPEWVAASRN--FTTKLWNIT 586

Query: 363 SRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++S   K  D  +P P     T++D  IL   + V  +  E +      +A   +   
Sbjct: 587 RFALS---KGADPHLPLPAEADRTDADRWILGRLAEVRGQTDELLDGYQFAKATEGLYHF 643

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   D Y +  K    +  +P  A     +   V+  L  +L    P +   ++  L
Sbjct: 644 AWDELADWYVELCK---TQLDDPATAPGTRALLGHVLDALLRMLHPIAPFVTEALWTAL 699



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R    I           H+GHA +  + DVL R  R+ G D L+  G D  G      
Sbjct: 41  SGRPAFSIVIPPPNVTGSLHLGHAMDHTLIDVLTRRRRMQGYDALWLPGMDHAGIATQSV 100

Query: 62  AQNAGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                  FV++                  + D +D S + F  T ++
Sbjct: 101 VERRMAAAGEPDRHTIGRERFVEKVWEWKAESGGSILGQMERLGDGVDWSRERF--TLDE 158

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                   ++K++ D G IY+      +S    +  +D EV  
Sbjct: 159 GLSRAVATVFKRMFDDGLIYRAERLVNWSPALRSAISDIEVDH 201


>gi|255082165|ref|XP_002508301.1| predicted protein [Micromonas sp. RCC299]
 gi|226523577|gb|ACO69559.1| predicted protein [Micromonas sp. RCC299]
          Length = 941

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 67/295 (22%), Positives = 110/295 (37%), Gaps = 21/295 (7%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +    + ++  W  +     +T G+ +      AKF+P  +   G DIL F    +   +
Sbjct: 480 VLYQEEDVLDTWFSSGLWPFSTLGWPNEEAADLAKFFPTQVMETGHDILFFWVARMVMMS 539

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           + ++  LP             KG K+SKSLGNV+DP+ VI+E G DALR+ L    A G+
Sbjct: 540 YGMTGKLPFHTVFLHGLVRDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQ 599

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----------AFTES 386
           D   + D L    N +  N I N     +  +    D                      +
Sbjct: 600 DLNLNMDRLAS--NRNFTNKIWNSGKFVLYSLEGMSDDERVELVDAAAAVPSSLPDLPLA 657

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           +  I+S    V+  +           A     S       D + +  K   L   +P  A
Sbjct: 658 ERWIVSRLHAVVDHVTSAHDRYDFGEAGRAAYSFFYDDFADWFIEGAKS-RLYGDDPAAA 716

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NRCFQSLDQRLKPG 496
            T   V + V+     +L  FVP +  +++  L    +   N+ +  LD     G
Sbjct: 717 KTTKAVALYVLDNTLRVLHPFVPYVTEEVWRSLPHRGDSIMNQSWPRLDAERDAG 771



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 22/184 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I+          H+GHA  + + D++AR  R+ G   L+  GTD  G       + 
Sbjct: 50  EPFTIAMPPPNVTGALHMGHAMFVTLQDIMARNARMRGRPTLWLPGTDHAGIATQLVVER 109

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           +                        K +  +     R +    D S + F  T ++   +
Sbjct: 110 SLEADGLTREGVGREEFERRTWEWKKEYGGRIGNQIRRLGASCDWSRERF--TLDEGLSE 167

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  + D+G IYKG Y   ++ + +   +D EV    +         PV+  E +G
Sbjct: 168 AVLEAFVSLHDRGLIYKGTYMVNWAPKLQTAVSDLEVEYADEPGTLYYFKYPVEGGEGDG 227

Query: 165 YFFR 168
            +  
Sbjct: 228 AYLP 231


>gi|75675628|ref|YP_318049.1| valyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|90101537|sp|Q3SSP4|SYV_NITWN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|74420498|gb|ABA04697.1| valyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 952

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 100/255 (39%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D       +++P ++ V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDETP-EVRRYYPTNVLVTGFDIIFFWVARMMMMGIHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P             KG K+SKS GNVIDP+ ++++ G DALR+ L      G+D   
Sbjct: 551 KEAPFSTVYIHALVRDEKGAKMSKSKGNVIDPLNLVDKYGADALRFTLAAMAVQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A    N   R   M             A    +  I+   +R   E+
Sbjct: 611 SPQRVEG--YRNFATKFWN-ACRFAEMNDCVVPARFDPTAATETLNRWIVHETARTACEV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E +++   + A + +   V     D Y +  KP  L + +P ++ T   +      ++ 
Sbjct: 668 TEAIESSRFNDAASAIYRFVWNVYCDWYLELAKPVILGEDSPAKSET-RAMVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P +  +++
Sbjct: 727 KLLHPFMPFITEELW 741



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 58/178 (32%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E   I           H+GHA    + DVL RF R+ G DVL+  GTD  G      
Sbjct: 33  REAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +   +  K               V Q             + +    D S + F  T ++
Sbjct: 93  VERQLMERKEPGRREMGRARFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++ ++   G IYK      +  +     +D EV +            P++
Sbjct: 151 GLSRAVAKVFVELHRAGLIYKDKRLVNWDPKLLTAISDLEVKQVEVKGSLWHLRYPIE 208


>gi|219847645|ref|YP_002462078.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541904|gb|ACL23642.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 1066

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 133/406 (32%), Gaps = 19/406 (4%)

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYY-----NDDEVYKGADGQYYNAQHNPVQWM 160
            R  +      G          + +R  A+      N+ +++   +        N ++  
Sbjct: 399 VRHYYPFCWRCGTPLLYYAKRSWYIRTTAFKADLVANNQQIHWVPEHIRDGRFGNWLE-N 457

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             +    R   +   +  +  +    ++ I    E+   V   L+DL L R   D    +
Sbjct: 458 NIDWAISRERYWGTPIPIWTNADGSHMVCIGSLAELEEKVGRSLRDLDLHRPYIDE--VV 515

Query: 221 PDDPQY--------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            +DP +        +   W D+ +  +    Y            PAD      D     F
Sbjct: 516 WEDPDHGLMRRIPDVADCWFDSGSMPVAQWHYPFENRDVFEMSHPADYICEAVDQTRGWF 575

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + ++  + LL         +     +   G+K+SKS GNVI+P EVI   GVDALR++L 
Sbjct: 576 YTLHAVSTLLFDRPAFKNVICLGHILDKDGQKMSKSRGNVIEPQEVINAYGVDALRWYLF 635

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G    +  D + + +   L               L  +             D   
Sbjct: 636 TAAPPGNARRFSMDLVSESMRKFLLTLWNTYAFFVTYANLDRWQPNSGRTAELQPIDRWA 695

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           L+  ++++Q      +   ++ A   +   V E+ + Y    +    K            
Sbjct: 696 LAALNQLVQTATAAFEEYDVYSAANAIEHFVDELSNWYVRRNRRRFWKSEGDADKEAAYQ 755

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                +  +A L   F+P ++ +I+  L    +    +S+     P
Sbjct: 756 TLYTCLVTVAKLAAPFIPFVSEEIYRNLVAERDASAPESVHLARWP 801



 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 21/160 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAKAAQ 63
           +           N +P + H       DV+ R+  + G  ++    G D HG  +    +
Sbjct: 37  KPFVFYEGPPTANGRPGLHHTISRSFKDVILRYRSMQGYRIIGRREGWDTHGLPVEIEIE 96

Query: 64  NA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  +  V +  + ++     +    S D +I T E  + +
Sbjct: 97  KKLGFSGKPDIERFGIAEFNRLCRESVWEYIQEWKAFTKRIAFWLSEDAYI-TYENDYIE 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           +   +++++ D+G +++      +  R     +D EV  G
Sbjct: 156 STWWIFRQLWDRGLLFRDYKVTMHCPRCGTSLSDHEVSLG 195


>gi|319407437|emb|CBI81088.1| Valyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 907

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 66/317 (20%), Positives = 118/317 (37%), Gaps = 9/317 (2%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E  +F             +      +P     + + FV+   K+   S  +    I    
Sbjct: 414 EKTYFNWMQNIQPWCISRQLWWGHQIPAWYGPDGMIFVEKSEKEALDSALSHYGKIVQLT 473

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             Q ++  W  +     +T G+ D        F+P  L V G DI+ F    +       
Sbjct: 474 RDQDVLDTWFSSALWPFSTLGWPDKTI-ELTTFYPTSLSVTGFDIIFFWVARMMMMGMHF 532

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P P            G K+SKS GN++DP+E+I++ G DALR+ L    A G+D  
Sbjct: 533 MGEVPFPTVYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMAAQGRDVK 592

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D   ++     +    + N  +R   M     D            +  IL+  S+ +  
Sbjct: 593 LDPSRVEG--YRNFVTKLWN-ATRFAKMNGVRRDVAFKPEKTKLAINRWILTELSKTVLA 649

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + + ++N   + A   +   V     D Y +  KP   + +N D        T  V+ ++
Sbjct: 650 VTKGIENYKFNDAAHALYRFVWNALCDWYLELLKP-VFQGSNEDSKKEAQACTAWVLDEV 708

Query: 459 AILLQAFVPKLANKIFD 475
             LL  F+P +  +++ 
Sbjct: 709 YKLLHPFMPHVTEELWS 725



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 25/172 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNTTIQDIMVRFQRMQGKNVLWQPGMDHAGIATQMVVERQLA 98

Query: 68  TTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +    Q                      +   + +    D S + F  T ++      
Sbjct: 99  ERQEPTRQEMGREKFIERVWKWRHEAGGMITNQLKRLGVSCDWSRERF--TMDEGLSQAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           R ++ K+  +G IYK      +  +     +D EV       Y      P++
Sbjct: 157 REVFVKLYKQGLIYKDKRLVNWDPKLLTAISDLEVEPKEVKGYLWHFRYPLE 208


>gi|319404436|emb|CBI78039.1| Valyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 907

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 125/318 (39%), Gaps = 10/318 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E+ YF  +   Q   +S        I      + +I   KS  + L  +   +   +++ 
Sbjct: 414 EKTYFNWMENIQPWCISRQLWWGHQIPAWYGPDGMIFVEKSEKEALDSALSHYGKTVQLT 473

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     +T G+ D        F+P  L V G DI+ F    +      
Sbjct: 474 RDQD-VLDTWFSSALWPFSTLGWPDKTI-ELTTFYPTSLSVTGFDIIFFWVARMMMMGMH 531

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               +P P            G K+SKS GN++DP+E+I++ G DALR+ L   +A G+D 
Sbjct: 532 FMGEVPFPTVYVHALVRDQYGAKMSKSKGNIVDPLELIDQYGADALRFTLAIMVAQGRDV 591

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             D   ++     +    + N  +R   M    +D            +  IL+  S+ + 
Sbjct: 592 KLDPSRVEG--YRNFVTKLWN-ATRFAEMNGVRHDLAFKPEKTKLAINRWILTELSKTVL 648

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            + + ++N   + A   +   V     D Y +  KP   + +N D        T  V+ +
Sbjct: 649 AVTKGIENYKFNDAAHALYRFVWNALCDWYLELLKP-VFQGSNEDSKKEAQACTAWVLDE 707

Query: 458 LAILLQAFVPKLANKIFD 475
           +  LL  F+P +  +++ 
Sbjct: 708 VYKLLHPFMPHVTEELWS 725



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 25/172 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA    I D++ RF R+ G +VL+  G D  G       +    
Sbjct: 39  CVMLPPPNVTGSLHMGHALNTTIQDIMVRFQRMQGKNVLWQPGMDHAGIATQMVVERQLA 98

Query: 68  TTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +    Q                      +   + +    D S + F  T ++      
Sbjct: 99  ERRELTRQEMGREKFIECVWKWRHEAGGIITNQLKRLGVSCDWSRERF--TMDEGLSQAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           R ++ K+  +G IYK      +  +     +D EV       Y      P++
Sbjct: 157 REVFVKLYKQGLIYKDKRLVNWDPKLLTAISDLEVEPKEVKGYLWHFRYPLE 208


>gi|222148981|ref|YP_002549938.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735967|gb|ACM36930.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 947

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 127/352 (36%), Gaps = 26/352 (7%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V K  D  YY    N   W      ++                 +               
Sbjct: 422 VPKNWDKTYYEWMENIQPWCVSRQLWWGHQIPAWYGPDGQVFVEKDEETALHAAIQHYLS 481

Query: 201 KSGLKD--LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
             G     +    + F  G  +  D   ++  W  +     +T G+ +      A+++P 
Sbjct: 482 HEGPMKAFVEDKIENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPEKTP-EVARYYPT 539

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEKISKS 306
           ++ V G DI+ F    W A ++  +L   K            V+ H  +  K G+K+SKS
Sbjct: 540 NVLVTGFDIIFF----WVARMMMMSLHFMKDEAGNPVEPFETVYVHALVRDKNGQKMSKS 595

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVI+P+E+I+E G DALR+ L    A G+D   D   +      +    + N  +R  
Sbjct: 596 KGNVINPLELIDEYGADALRFTLTIMAAQGRDVKLDTARVAG--YRNFGTKLWN-ATRFA 652

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
            M     D       A    +  IL+  +R  +E+ E + +   + A + +   V     
Sbjct: 653 GMNGVKSDPSFLPEAATLAINRWILTELTRAEREVTEAIAHFRFNDAASALYRFVWNQFC 712

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           D Y +  KP      +    +        V+ Q   LL  F+P +  +++  
Sbjct: 713 DWYLELLKP-VFAGEDEVAKTEAQACAAYVLEQTYKLLHPFMPFMTEELWAH 763



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 23/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D++ RF R+ G DVL+  G D  G       + 
Sbjct: 36  ESFTIVIPPPNVTGSLHMGHALNNTLQDIMIRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           F+D+                + +    D S + F  T ++   
Sbjct: 96  QLMEKQLPGRREMGRDAFIDKVWEWKDESGGLIFNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +    ++  +  +G IYK      +  +     +D EV +            P++
Sbjct: 154 EAVLEVFVTLYKQGLIYKDKRLVNWDPKLLTAISDLEVEQHEVNGNLWHLRYPLE 208


>gi|68535622|ref|YP_250327.1| valyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|90103534|sp|Q4JWU8|SYV_CORJK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68263221|emb|CAI36709.1| valS [Corynebacterium jeikeium K411]
          Length = 932

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 137/433 (31%), Gaps = 39/433 (9%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IR   +         +  +   G   +   +    L ++ +   +E+ K   G    +  
Sbjct: 355 IRLALEEQGRIVARKFPYVHSVGHSERSKEAVEPRLSEQWFVKVEELAK-MSGDAIRSGD 413

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + +    +E  +F             +      +PI               +        
Sbjct: 414 SVIHPSSQEPRWFDWVDDMHDWCISRQLWWGHRIPIWYGPNGEIVCCGPDDEAPTGEG-- 471

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                     + ++  W  +     +T G+ +       KF+P  + V G DIL F    
Sbjct: 472 ------WYQDEDVLDTWFSSALWPFSTMGWPEKTP-ELEKFYPTSVLVTGYDILFFWVAR 524

Query: 275 WPAFLLSANLPLP---------------KKVFSHGFILHK-GEKISKSLGNVIDPIEVIE 318
              F   A+   P                 +F HG +  + G K+SKSLGN IDP++ + 
Sbjct: 525 MMMFATFASKHTPEILGTGKDGRPQIPFNDIFLHGLVRDEHGRKMSKSLGNGIDPMDWVR 584

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G DALR+ L R    G D    +D  +   N   A  + N  ++   M       + P
Sbjct: 585 DYGADALRFTLARGANPGSDLPVGEDAAQSSRN--FATKLYN-ATKFALMNGARVGEL-P 640

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK---- 432
                T++D  IL     V Q + + +       A   +         D Y +  K    
Sbjct: 641 ARETLTDADRWILDRLEEVRQLVDDALDRYEFSLANENLYRFAWGEFCDWYLEIAKVQIP 700

Query: 433 -PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             W+        R      V   V+  +  LL   +P +   ++  L   +E    +SL 
Sbjct: 701 RDWDSATEEQVQRGIRTQIVLGRVLDSVLRLLHPAMPFVTETLWKALTDGEEGYS-ESLV 759

Query: 491 QRLKPGFMLHKTF 503
               P   L    
Sbjct: 760 TADWPTADLTNGG 772



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D +AR  R+ G +VL+  G+D  G      
Sbjct: 63  SDKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRKRMQGFEVLWLPGSDHAGIATQTK 122

Query: 62  AQNAGVTT-----------------KVFVDQN----SRNFRDMADVLDISYDDFIRTTEK 100
            +     T                   + D+      R  R + D +D S + F  T + 
Sbjct: 123 VEANLKETEGKDRFDYGRDAFVGKVWEWKDRYGGVIQRQMRAIGDSVDWSRERF--TLDD 180

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 + ++K++ D G IY+      +S   +   +D EV    D
Sbjct: 181 GLSRAVQTMFKELFDAGLIYRANRMVNWSPVLQTAISDIEVVYSDD 226


>gi|254456291|ref|ZP_05069720.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083293|gb|EDZ60719.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 875

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 130/372 (34%), Gaps = 43/372 (11%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E        Y +  ++ ++    E +F        K      S      P    ++   
Sbjct: 331 KEENIKNKVPYGDRSNSIIEPFLTEQWFVDAEKLSVKAKEVVNSKKTNFFPENW-SKTYF 389

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQY------------------------------ 226
              + ++   +SR+   WG  I     P                                
Sbjct: 390 QWMNNIEPWCISRQ-LWWGHQIPAWYGPDKKIFVANNQEEVKELANKHYGKDVELIRDPD 448

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +      T G+ DN D  + KF+P  + V G DI+ F    +           
Sbjct: 449 VLDTWFSSGLWPFATLGWPDNKDYVE-KFYPTSVLVTGFDIIFFWVARMIMFGTEFLNKE 507

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P             KG+K+SKS GNVIDP+++IE+   DALR+ L+   + G D    +D
Sbjct: 508 PFKDIYVHALVRDEKGQKMSKSKGNVIDPLDLIEKYSADALRFTLLSMASPGTDVKLSED 567

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K     +  N + N  +  +     D+  +          ++ I +       +I +N
Sbjct: 568 RVKG--YRNFLNKLWN-ANNFLITNECDFTNIDKISNLSININKWIYAELIDAKSKIEKN 624

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +++     A             D Y +  K   L   N +  S V  V+  + +Q+ ILL
Sbjct: 625 LEDYRFDEAAKNAYQFAWHSYCDWYLELSKT-ILFSDNEEAKSEVKKVSSYIFKQILILL 683

Query: 463 QAFVPKLANKIF 474
             F+P +  +I+
Sbjct: 684 HPFIPFVTEEIW 695



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 20/177 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  I           H+GHA    I D+L R+HR++  + L+  GTD  G       + 
Sbjct: 32  KKFSIVIPPPNVTGSLHMGHALNNSIQDLLVRYHRMNNYETLWQPGTDHAGIATQALVER 91

Query: 65  AGVTTK----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDT 105
              T K                 + +Q      +    L  S D + R   T ++    +
Sbjct: 92  KLTTEKIDKNEIGREKFIEKVWEWKEQYGDIIINQLKKLGCSCD-WSRNAFTMDENLSKS 150

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              ++  + +K  IYK      +    +   +D EV +            P+   +E
Sbjct: 151 VIKVFVDLYNKDLIYKDKKLINWDTVLKTAISDLEVDQREVNSKIYYIRYPIDGTDE 207


>gi|218671833|ref|ZP_03521502.1| valyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 341

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 16/274 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
            F  G  +  D   ++  W  +     +T G+ +      A+++P ++ V G DI+ F  
Sbjct: 25  NFKPGEIVTRDED-VLDTWFSSALWPFSTLGWPEQTP-ELARYYPTNVLVTGFDIIPFWV 82

Query: 273 IYWPAFLLSAN-------LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDA 324
           +      L          +     V+ H  +  K G+K+SKS GNVIDP+E+I+E G DA
Sbjct: 83  VRMMQMGLHFMKDDNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADA 142

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR+ L    A G+D   D   +      +    + N  +R   M     D       A  
Sbjct: 143 LRFTLAIMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGAKSDPHFVPEAAEL 199

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             +  IL+  +R  +++ E ++    + A   +   V     D Y +  KP      +  
Sbjct: 200 TINRWILTELARTERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDAG 258

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     +  ++ ++  LL  F+P +  +++  
Sbjct: 259 AKAEAQACSAYILEEIYKLLHPFMPFMTEELWAH 292


>gi|330432437|gb|AEC17496.1| leucyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 860

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L  SY  D  I T + +++   +  + ++  KG IY
Sbjct: 91  IKNKAAPATWTYDNIEYMKNQLKMLGFSYDWDREIATCKPQYYKWEQWFFTELYKKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G           PV+  E   +F +++ Y ++LL   
Sbjct: 151 KKTSTVNWCPNDQTVLANEQVNDG----CCWRCDTPVEQKEIPQWFVKITDYAEQLLQGL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  PE+   ++           G
Sbjct: 207 DQLPEWPDQVKAMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 72/298 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKK 289
           Y          +  +A +W P D ++ G +    H +Y+  +        L A      K
Sbjct: 503 YTCPQYQQGMLNSEEANYWLPVDQYIGGIEHATMHLLYFRFYHKLLRDAGLLACDEPATK 562

Query: 290 VFSHGFIL--------------------------HKGE------------------KISK 305
           +   G +L                           KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSETNERIWVSPTKVTITRDEKGRIIKAVDPEGHELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       AN     + + 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLRRLWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
               L+    +   P A +   +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 TYDYLQQPATVELDPKALSADQKALRRDLHKTIAKVSDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +      P        DRA     V  E +  +  +L    P +  +++  L   D+
Sbjct: 737 TK-----APLV---QEQDRA-----VMKEALNAVIKMLYPITPHICFQLWQDLGNEDD 781


>gi|302382931|ref|YP_003818754.1| valyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193559|gb|ADL01131.1| valyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 904

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 127/371 (34%), Gaps = 39/371 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L   E       P         +++  ++   +SR+   W
Sbjct: 376 IEPWLTDQWYVDAQTLAQPALKAVEQGDTVFEPKSYEKIYFEWLR-NIEPWCISRQ-LWW 433

Query: 217 G--IKIPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPD 249
           G  I    D    +YV                         W  +     +T G+ +  D
Sbjct: 434 GHRIPAWYDADGQIYVAETEAEAVAQSGGKALTQDEDVLDTWFSSALWPFSTMGWPEKTD 493

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              A+F+P    V   DI+ F    +          +P  + + +      KG+K+SKS 
Sbjct: 494 -DLARFYPTSDLVTAADIIFFWVARMMMMGLHFMDEVPFKRVIINGLVRDEKGQKMSKSK 552

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVIDP+ +I+E+G D LR+ +       +D    +  ++     +    + N    S  
Sbjct: 553 GNVIDPLVIIDELGADPLRFTMAILSG-TRDIKLSRQRIEG--YRNFGTKLWNAARFSQM 609

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
                 +G  P+    T  +  +    ++  + + E ++      A + +   V     D
Sbjct: 610 NEALRVEGFDPSTVDQT-INRWVRGELTKTERAVSEAIEGGRFDDAASALYRFVWNVFCD 668

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  KP   + ++    +    +T   + Q   LL   +P +  +++D L      R 
Sbjct: 669 WYLELAKP-VFQGSDAAAKAETRAMTAWTLDQTLKLLHPVMPFITEELWDELGKDGAARE 727

Query: 486 FQSLDQRLKPG 496
              L     P 
Sbjct: 728 EPMLIGAQWPA 738



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 62/174 (35%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA    + D+LAR+HR+ G  VL+  GTD  G       + 
Sbjct: 34  EAYSIVIPPPNVTGSLHIGHALNNTLQDILARYHRMRGKAVLWLPGTDHAGIATQMVVER 93

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +        +  R +    D S + F  T ++  +
Sbjct: 94  QLAAAGNVGRRDMGREAFVQKVWDWKAESGGTIVQQLRRLGASCDWSRERF--TLDEGLN 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ ++  +G IY+      +  + +   +D EV +      Y     P+
Sbjct: 152 AAVRKVFVQLHQQGLIYRDKRLVNWDPQFQTAISDLEVEQREVEGAYWHFAYPL 205


>gi|149911110|ref|ZP_01899737.1| leucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805860|gb|EDM65849.1| leucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 864

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 30  ETKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRMQGKNVLQPIGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +     L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKGQLTSLGFGYDWKREIATCTPEYYRWEQEFFTKLFNKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G           PV+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVNDG----CCWRCDTPVEQKEIPQWFIKITEYADELLTS 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           G+
Sbjct: 206 IDDLDGWPEQVKTMQRNWIGRSEGI 230



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 76/304 (25%)

Query: 232 IDALTNYLTTTG----YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y           +  +   A  W P D +V G +    H +Y   F        
Sbjct: 497 FMESSWYYARYCSATSETEMLNREDANHWLPVDQYVGGIEHACMHLLYARFFHKLLRDEQ 556

Query: 280 -LSANLPLPKKVF-------SHGFILHKGE------------------------------ 301
            + +N P  + +        ++ +    G                               
Sbjct: 557 MVDSNEPFKRLLCQGMVLADAYYYTNENGGRVWVSPLDVTAERDEKGQATKYIDNEGNEL 616

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  +I+  G D +R F++      +   +    ++        
Sbjct: 617 VHTGMTKMSKSKNNGIDPQTMIDRFGADTVRLFMMFAAPADQTLEWQDSAVEGAHR--FL 674

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
             I  L    +S      D       A     + +     + + ++ +++  +   + A+
Sbjct: 675 RRIWTLAYNHIS----KGDVADLDVAALNGKQKELRREVHKTIAKVSDDIDRRQTFNTAI 730

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++++ +              P  A     +  E +  +  LL    P ++ +++
Sbjct: 731 ASVMELMNKLTK-------------APQEAEQDRALLQEALVAVVRLLAPITPHISFELW 777

Query: 475 DILF 478
             L 
Sbjct: 778 GKLG 781


>gi|42526872|ref|NP_971970.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81412332|sp|Q73MZ2|SYV_TREDE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41817187|gb|AAS11881.1| valyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 909

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 137/398 (34%), Gaps = 42/398 (10%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G   +          +E     +E             H  ++    + +F ++     K
Sbjct: 329 RGLSTEKARKAVIEDLEELGLFKNEEKIKHAVGCCYRCHTSIEPYVSKQWFVKMQPLAQK 388

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L  ++       P +  N   +   + ++D  +SR+   WG +IP              
Sbjct: 389 ALDAWKKGDVVFYPQKWENT-YAHWMNNIRDWCISRQ-LWWGHRIPVWYCADCGKTIVSR 446

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                            + ++  W  +     +T G+ +  +   A+F+P    V G DI
Sbjct: 447 TDITECPHCKSKNIKQDEDVLDTWFSSWLWPFSTLGWPEKTE-DLARFFPTSALVTGHDI 505

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    +   +   +   P             +G K+SKSLGN IDP+  IEE G DA+
Sbjct: 506 IFFWVARMIMASLQFTGKAPFKDIFIHGLVRDKQGRKMSKSLGNGIDPLVAIEEFGADAM 565

Query: 326 RYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           ++ L     +  +D   D +  K  + +  AN + N     +  +       +   G+  
Sbjct: 566 KFTLTFMCGSQSQDFLIDMESFK--LGSKFANKVWNASRYILGNLAGRTIVPVGRDGSLN 623

Query: 385 ---ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT 439
              E D  I    +   Q +R ++ +   + A  +V         D Y +  K    K  
Sbjct: 624 SLKELDRWIYHELNEAAQTVRSSLDSYRYNEAAQKVYEFFWNNFCDWYVEGTK-LSFKYG 682

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +         V + V+ +   LL  F+  +  +I+  L
Sbjct: 683 DEKEKDRAASVLLAVLEESLRLLHPFLAFVTEEIYSKL 720



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +           H+GHA +  + DV+ R+HR+ G + L+  GTD  G       
Sbjct: 41  TKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTDHAGIATQSVV 100

Query: 63  QN--------------AGVTTKVFVDQNSRN--FRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                    KV+  +N  +         + +S  +D    T ++    
Sbjct: 101 EKKLKAEGKNRRDLGREAFIEKVWEVKNEHHSIITKQLRKMGVSVDWDRERFTLDEGLSQ 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G IY+G Y   +        +DDEV  
Sbjct: 161 AVREVFVSLYEQGLIYQGNYLVNWCPSCGTAISDDEVEH 199


>gi|189347262|ref|YP_001943791.1| isoleucyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341409|gb|ACD90812.1| isoleucyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 1084

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 110/281 (39%), Gaps = 11/281 (3%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G +    P+ +  VW D+ +       Y         K +PAD    G D     F+ ++
Sbjct: 539 GRRFNRTPELV-DVWFDSGSMPFAQLHYPFENRDVFEKTFPADFIAEGVDQTRGWFYTMH 597

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A L+   +     + +   +  +G+K+SKS GNV+DP E ++  G DALR++L+    
Sbjct: 598 AIATLIFDTVAYKNLIVNGHILDREGQKMSKSKGNVVDPFETMQRYGADALRWYLLVSSP 657

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILS 392
             +   ++   +++         I +     +   +  +    P       +E D  +LS
Sbjct: 658 PWRPKSFNTAEIEEEQRRFFRAFINSYNFFVLYANVDGFTYAEPDIAVQERSELDRWVLS 717

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVL 448
             + ++  +   M+   +  A+  +         + Y     ++ W+  +   D+ +   
Sbjct: 718 CLNTLVAGVTRRMEQYDLTGAVRLINDFTVDDLSNWYIRRSRKRFWK-SEMGTDKLAA-Y 775

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 +  +A LL  F P +A KI+  L        ++S+
Sbjct: 776 QTLYTALMTIAELLAPFTPFIAEKIYQNLNGISRKASWESV 816



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--------- 63
               N +P + H +   I DV+ R+  + G  V    G D HG  +  A +         
Sbjct: 50  PPTVNGKPGVHHVFSRTIKDVVCRYKTMQGYLVPRKAGWDTHGLPVEIAVEKKLGLKNKS 109

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
                        A       +D N   +  + + +   +  DD   T    + ++    
Sbjct: 110 QVVEYGEGEFNTEARELVYHHIDDNREGWGKLTEQMGYWVDMDDPYITCTNNYIESVWWG 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 170 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 206


>gi|240141544|ref|YP_002966024.1| valine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240011521|gb|ACS42747.1| valine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 906

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 129/340 (37%), Gaps = 17/340 (5%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIP 221
           E  FF+     +      +      +P+    E  I   +S    ++ ++      + + 
Sbjct: 408 EKIFFQWLENIEPWCVSRQLWWGHQIPVWYDAEGGIFVAESEADAVAQAKAKHGREVALT 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+ F    +      
Sbjct: 468 RDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDIIFFWVARMMMMGLH 525

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+   P             KG K+SKS GNV+DP+++I+  G DALR+ L    A G+D 
Sbjct: 526 LTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAALAAPGRDI 585

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                 ++     + A  + N  +R   M   +              +   L+  ++ + 
Sbjct: 586 KLGPQRVEG--YRNFATKLWN-AARFAEMNGCELKADFRPEAVRETLNAWALTEAAKAVA 642

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVI 455
           E+ + +     + A A     V     D Y +  KP  L+    +P   +        +I
Sbjct: 643 EVAQGITVYRFNDAAAAAYRFVWNVFCDWYLELAKP-VLQGEGVDPAARAETQATVAFLI 701

Query: 456 RQLAILLQAFVPKLANKIF----DILFVADENRCFQSLDQ 491
            Q+A LL  F+P L  +++     +L         +S  +
Sbjct: 702 DQIAKLLHPFMPFLTEELWAIKGQVLPTPRGLLALESWPE 741



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    I D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  EPFSIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGRDVLWQPGTDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             + T+                +  +           + +    D S + F  T ++   
Sbjct: 96  KLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  +  +G IY+      +  + +   +D EV +     +      PV
Sbjct: 154 RAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPV 207


>gi|261867173|ref|YP_003255095.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412505|gb|ACX81876.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 862

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIAYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDKTVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLNCL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   ++           G
Sbjct: 207 DELPQWPETVKTMQRNWIGRSEG 229



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 99/297 (33%), Gaps = 72/297 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          +  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPEYQQGMLNSEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPANK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTNVTLERDDKGRIVKATDDEGHELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++          + NLV   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLARLWNLVFEY 680

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
                K+       P   + + +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 681 ----NKNPAKTPLNPTVLSAAQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R      P        DRA     +  E +  +  +L    P +   ++  L   D
Sbjct: 737 TR-----AP---LDDEQDRA-----MMAEALSAVVRMLYPITPHICFHLWQELGNQD 780


>gi|293391011|ref|ZP_06635345.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951545|gb|EFE01664.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 862

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIAYMKNQLQLLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V++G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSTVNWCPNDKTVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLNCL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   ++           G
Sbjct: 207 DELPQWPETVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 100/297 (33%), Gaps = 72/297 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          +  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPEYQQGMLNSEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSDEPANK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTKVTLERDDKGRIVKATDDEGHELVHAGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++       A      V   
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------AKRFLARVWNL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    K+       P A + + +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VFEYNKNPAKTPLNPTALSAAQKALCRDVHKTIAKVSDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            R      P        DRA     +  E +  +  +L    P +  +++  L   D
Sbjct: 737 TR-----AP---LDDEQDRA-----MMAEALSAVVRMLYPITPHICFRLWQELGNQD 780


>gi|225864163|ref|YP_002749541.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229184419|ref|ZP_04311626.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|225787752|gb|ACO27969.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228599215|gb|EEK56828.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 1033

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECERC---DHQFAPKSIADLRKHSTKETP-----EDLELHKPYVDEVQVYCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMTRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|182413823|ref|YP_001818889.1| valyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841037|gb|ACB75289.1| valyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 910

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 83/390 (21%), Positives = 143/390 (36%), Gaps = 63/390 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E ++ R    ++   +  + H +F    ER ++V       ++D  +SR+   
Sbjct: 354 PIEPRLTEQWWLRYPKIEEAKAAVRDGHIKFH--PERWSKVYLHWLENIQDWCISRQ-LW 410

Query: 216 WGIKI----------------------------PDDPQYIMYVWIDALTNYLTTTGYLDN 247
           WG +I                             +    ++  W  +      T G+ D 
Sbjct: 411 WGHRIPVWYRKGADRSDPKNWHVSVDGPADPQNWEQEDDVLDTWASSWLWPFATMGWPDQ 470

Query: 248 PDGS---KAKFWPADLHVIGKDILRFHAIYW---------PAFLLSANLPLPKKVFSHGF 295
            +        F+P    V G DI+ F              P   L   +P     F+   
Sbjct: 471 AEMKQAGFDYFYPTSTLVTGPDIIFFWVARMIMAGLEFVRPGESLERRIPFRDVYFTGII 530

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN  DP+ +I++ G D LR+ ++     G+D  + +D ++   N    
Sbjct: 531 RDQQGRKMSKSLGNSPDPLVLIDKYGADGLRFGIISIAPQGQDIRFQEDRIEGGKN--FC 588

Query: 356 NGIGNLVSRSVSMILKDYDG-------MIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           N + N   R   M  +  D            P  F   D +IL   S    E+    +  
Sbjct: 589 NKLWN-ACRFRQMSGEAGDNASLAAIAARLEPAKFDADDHAILDRLSATTAELERCFREF 647

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               A+  + S       D Y +  K    K    +  +  L +   V+RQ  +LL  FV
Sbjct: 648 EFSAAVQALYSFFWGDFCDWYVEVSK---AKMQAAETKANCLAIQDVVLRQTLLLLHPFV 704

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPG 496
           P +  +++ +L  A      +S+D R KPG
Sbjct: 705 PFITEELWGLLGYAGN----ESVDAR-KPG 729



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 19/174 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I            +GH     I D+L R  RL+G   ++  GTD  G       +
Sbjct: 35  RPAYSIVIPPPNVTGVLTMGHVLNNSIQDILIRRARLEGKSPVWVPGTDHAGIATQTVVE 94

Query: 64  NAGVTTK----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
                 K                 +  +      +    L  S  +D    T +  +   
Sbjct: 95  RELRKQKKTRHDFGREKFLEKVWEWRHEKGGIILEQLRRLGASCDWDRTAFTMDPAYSKR 154

Query: 106 CRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              ++ ++ ++G IY+G     W  +   A  +++ + K  +G  Y  ++  V 
Sbjct: 155 VLHVFVELFNRGYIYRGKRMVNWCPVSLTALSDEEVIMKPVNGALYRVRYELVD 208


>gi|15640019|ref|NP_219472.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026258|ref|YP_001934030.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094417|sp|O83998|SYV_TREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3323365|gb|AAC26589.1| valyl-tRNA synthetase (valS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018833|gb|ACD71451.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 956

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 139/376 (36%), Gaps = 49/376 (13%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E                ++      +F ++     + L+ ++       P +  N  + 
Sbjct: 376 REERIVHSVGVCYRCEAVIEPYLSLQWFVKMKPLASQALAAWKRADVQFHPKKWENTYVR 435

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMY 229
           +++  ++D  +SR+   WG +IP                              DP  ++ 
Sbjct: 436 WLEH-IRDWCISRQ-LWWGHRIPVWYCAQCAQQTVSRVDVQRCAHCGSADITQDPD-VLD 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W  +     +T G+       +A F+P    +   DI+ F    W A ++ A L   + 
Sbjct: 493 TWFSSWLWPFSTLGWPQETQKLRA-FYPTSAVITAYDIIFF----WVARMIMAGLEFTQT 547

Query: 290 VFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           V      LH      +G K+SKSL N +DP+ +I   G DALR+ L    A G+D   + 
Sbjct: 548 VPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMCAQGQDVLIEM 607

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D  K  + +  AN + N  SR +   L+          + TE D  I    +  +Q++R 
Sbjct: 608 DSFK--MGSRFANKVWN-ASRYILGNLEGRRVYAIAHVSLTELDRWIFHTFNETVQQVRT 664

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++    + A   V         D Y +A K    +K +         V   ++ +   L
Sbjct: 665 ALEAYRFNDAAQAVYEFFWNSFCDWYVEASK-CSFQKPDEQEKDRAASVLCTLLEETLRL 723

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 724 LHPFLPFVTEEIYRSL 739



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 23/187 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAK 60
               I+          H+GH    ++ D++ R+ R+ G   L+  GTD  G      + +
Sbjct: 60  RTFVIAIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVER 119

Query: 61  AAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A +  G+  +    +                     R M    D + + F  T +     
Sbjct: 120 ALRKEGIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERF--TLDAGMSA 177

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPVQWMEEE 163
           + R  +  + ++G +Y+  Y   +  R     +DDEV+    DG  Y  ++  +   EEE
Sbjct: 178 SVREAFVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEE 237

Query: 164 GYFFRLS 170
           G      
Sbjct: 238 GNGVPPP 244


>gi|157376611|ref|YP_001475211.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083149|sp|A8FZ10|SYL_SHESH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157318985|gb|ABV38083.1| leucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 863

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V+  E   +F +++ Y D+LL  
Sbjct: 150 YKKTASVNWCPNDETVLANEQVIDG----CCWRCDTTVEQKEIPQWFIKITEYADELLKD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +   E+   ++           G+     +  S +TFD     PD    + YV I A 
Sbjct: 206 IDQLDEWPEQVKTMQRNWIGRSEGIEMTFGVVDSEETFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 106/322 (32%), Gaps = 84/322 (26%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y          +     KA +W P D ++ G +    H +Y+  F        L
Sbjct: 496 FMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDIGL 555

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 556 VNSDEPAKRLLTQGMVLADAFYYNNEKGARVWVAPSDVTVQETDEKGRIQKAVDSEGHEL 615

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP  ++++ G D +R F++          + +  ++        
Sbjct: 616 VYTGMSKMSKSKNNGIDPQVMVDKYGADTVRLFMMFAAPPELTLEWQESSVE-------- 667

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQL-IH 411
            G    + R   +           P      D   + +     + + ++ ++++ +   +
Sbjct: 668 -GAHRFIKRLWKVAHDHVAKGATAPLDVKTLDTKQKELRRELHKTIVKVGDDIERRQMFN 726

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A V+ L++ + +      P    +T  DRA     +  E +  +  LL   +P  + 
Sbjct: 727 TAIASVMELMNRLQK-----AP---TETQQDRA-----LMQEALSAVVRLLYPIIPHTSF 773

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            +++ L   +  E+  +   DQ
Sbjct: 774 SLWNDLGNEENIEDVRWPEADQ 795


>gi|325473922|gb|EGC77110.1| valyl-tRNA synthetase [Treponema denticola F0402]
          Length = 909

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 138/399 (34%), Gaps = 44/399 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +G   +          +E     +E             H  ++    + +F ++     K
Sbjct: 329 RGLSTEKARKAVIEDLEELGLFKNEEKIKHAVGCCYRCHTSIEPYVSKQWFVKMQPLAQK 388

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L  ++       P +  N   +   + ++D  +SR+   WG +IP              
Sbjct: 389 ALDAWKKGDVVFYPQKWENT-YAHWMNNIRDWCISRQ-LWWGHRIPVWYCTDCGKTNVSR 446

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                            + ++  W  +     +T G+    +   A+F+P    V G DI
Sbjct: 447 TDITECPHCKSKNIKRDEDVLDTWFSSWLWPFSTLGWPKKTE-DLARFFPTSALVTGHDI 505

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           + F    +   +   +   P             +G K+SKSLGN IDP+  IEE G DA+
Sbjct: 506 IFFWVARMIMASLQFTGKAPFKDIFIHGLVRDKQGRKMSKSLGNGIDPLVAIEEFGADAM 565

Query: 326 RYFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TP 380
           ++ L     +  +D   D +  K  + +  AN + N  SR +   L     +      + 
Sbjct: 566 KFTLTFMCGSQSQDFLIDMESFK--LGSKFANKVWN-ASRYILGNLAGRTIVPVVRDGSQ 622

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            +  E D  I    +   Q +R ++ +   + A  +V         D Y +  K    K 
Sbjct: 623 NSLKELDRWIYHELNEAAQTVRSSLDSYRYNEAAQKVYEFFWNNFCDWYVEGTK-LSFKY 681

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +         V + V+ +   LL  F+  +  +I+  L
Sbjct: 682 GDEKEKDRAASVLLAVLEESLRLLHPFLAFVTEEIYSKL 720



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +           H+GHA +  + DV+ R+HR+ G + L+  GTD  G       
Sbjct: 41  TKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTDHAGIATQSVV 100

Query: 63  QN--------------AGVTTKVFVDQNSRN--FRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                    KV+  +N  +         + +S  +D    T ++    
Sbjct: 101 EKKLKAEGKNRRDLGREAFIEKVWEVKNEHHSIITKQLRKMGVSVDWDRERFTLDEGLSQ 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + ++G IY+G Y   +        +DDEV  
Sbjct: 161 AVREVFVSLYEQGLIYQGNYLVNWCPSCGTAISDDEVEH 199


>gi|282162890|ref|YP_003355275.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155204|dbj|BAI60292.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 1105

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 81/400 (20%), Positives = 143/400 (35%), Gaps = 68/400 (17%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ +M  + +F  +S  ++ +L+          P    +       SG +D  
Sbjct: 446 HCWRCKTPIIFMTTDQWFIAVSKIKEPMLAEVSR--VNWYPPWAGSSRFHDWVSGARDWC 503

Query: 209 LSRKTFDWGIKI------------------------------------------------ 220
           +SR+   WGI I                                                
Sbjct: 504 ISRQR-YWGIPIPIWKCENCGSMDVIGTKEELEHKTGVRVNDLHRPFVDSVYMECECGGR 562

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I  VW D+      T  +          +WPAD  V G D     F++      
Sbjct: 563 MKRVEDIFDVWFDSAVASWATLRFPQRK--DLMDWWPADFIVEGHDQTRGWFYSQLGAGM 620

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P          +  +G K+SKSLGNV+ P EV+E+ G DALR +++ + A  +D
Sbjct: 621 VGFGKAPYNSVCMHGFTLDDQGRKMSKSLGNVVAPEEVLEKFGADALRLYVLSQSAPWED 680

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTE----SDESILSV 393
             +  D           N   N+    +  M+L  +D    T G+  E     D  ILS 
Sbjct: 681 LSFSWDECGNVYRT--LNIFWNVYRFPLPYMVLDKFDPTKTTYGSVKEHLRVEDRWILSR 738

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD--AQKPWELKKTNPDRASTVLY 449
              V++E+ E M    +HR+   +I+ +       Y     ++ W     +PD+ +   +
Sbjct: 739 LQAVIKEVNEGMATYELHRSTRALINFILEDLSRWYVQLSRERTWVEA-NDPDKLAA-YW 796

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           V   V+     L+  + P +A +++  L    E   ++S+
Sbjct: 797 VLYHVLSNTVKLMAPYTPYMAERMYQNLVRNSEPSAWESV 836



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K Y      Y   + H+G A+  II D + R+  ++G D++   G D HG  I   
Sbjct: 36  KGNKKFYFVDGPPYTTGRIHLGTAWNKIIKDSVLRYRSMNGFDLMDRAGWDMHGLPIEVK 95

Query: 62  AQ-----------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K F  +N R        L +   +DD   T +  +
Sbjct: 96  VESLLGFKTKKDIENYGVAQFTEKCKAFAIENMREMTGQFKKLGVWLDWDDPYMTLKNEY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      K+  +K  + +G  +  +  R E    D EV  
Sbjct: 156 IEAAWWTIKQAHEKKLLERGLRNVNWCPRCETAIADSEVEY 196


>gi|238790771|ref|ZP_04634530.1| Leucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238721129|gb|EEQ12810.1| Leucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 860

 Score =  166 bits (420), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G           PV+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDQTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDTLESWPEQVKTMQRNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                 + TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAFDHTAKGATAPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LLQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|90019097|gb|ABD84202.1| methionyl-tRNA synthetase-like [Yersinia sp. MH-1]
          Length = 276

 Score =  166 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 28/274 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +KL ++ A+ Y N   H+GH  E I AD+  RF R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKLLVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNEVHFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            GV  +  + + S+  +       ISYD++  T    + +   ++++++ + G I     
Sbjct: 66  LGVEPEQMIAEMSQEHQQDFAGFGISYDNYHSTHSDENRELSSLIYRRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKAPDQYGDNCEVCGATYSPTELIEPKSAVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E +FF L A+ + L ++  S     L  +  N++  +  SGL+   +SR    +G +
Sbjct: 186 RESEHFFFDLPAFSEMLQAWTRSGA---LQEQVANKMQEWFDSGLQQWDISRDAPYFGFE 242

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           +PD P    YVW+DA   Y+ +   L +  G   
Sbjct: 243 VPDAPGKYFYVWLDAPIGYMGSFKNLCDKRGDLD 276


>gi|307256925|ref|ZP_07538703.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306864659|gb|EFM96564.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 916

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 86  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 145

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 146 VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 205

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V++G           PV+  E   +F +++ Y ++LL++ 
Sbjct: 206 KKTSTVNWCPNDATVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLTHL 261

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 262 DNLPQWPDQVKTMQRNWIGRSEG 284



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 78/300 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 558 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 617

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 618 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 677

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 678 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 728

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +             A +++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 729 WNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 788

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +      P E      D+A     V  E +  +  +L    P +  +++  L   D
Sbjct: 789 NKLTK-----APLE---NEQDKA-----VMAEALSAVVRMLYPITPHICFELWQALGNND 835


>gi|83311346|ref|YP_421610.1| valyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946187|dbj|BAE51051.1| Valyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 889

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/483 (15%), Positives = 155/483 (32%), Gaps = 58/483 (12%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           DE+     K      +T     +      R     ++I +D   RT ++         ++
Sbjct: 261 DEYSDPT-KGTGAVKITPAHDFNDFQVGVRHDLPQINI-FDRDARTIDE-----VPEGYR 313

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +       K                D          Y +     ++    + +F   + 
Sbjct: 314 GLDRYDARKKVVEEFEALG-----LLDKIEPHTHMVPYGDRSGVVIEPWLTDQWFVDAAT 368

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY--- 226
                +   E+     +P    N    +++  ++   +SR+   WG  +     P     
Sbjct: 369 LAKPAIEAVETGKTRFVPKHWENTYFEWMR-NIQPWCISRQ-IWWGHQVPAWYGPDGAFF 426

Query: 227 ---------------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                                      ++  W  +     +T G+ +       +++P D
Sbjct: 427 VEETEDEARAAAAAHYGKDVELTRDSDVLDTWFSSALWPFSTLGWPEKTP-ELDRYYPGD 485

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           + V G DI+ F    +         ++P             KG+K+SKS GN+IDP+++I
Sbjct: 486 VLVTGFDIIFFWVARMMMMGIHFMGDVPFRDIYIHALVRDEKGQKMSKSKGNIIDPLDLI 545

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G DALR+ L    A G+D    +  ++     + A  + N  +R   M         
Sbjct: 546 EKYGCDALRFTLSALAAQGRDVKLAESRVEG--YRNFATKLWN-AARFCQMNECRPVAGF 602

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWE 435
                    +  I++  + +  ++   ++      A       V     D Y +  KP  
Sbjct: 603 DPKAVKETVNRWIVAKTAELAAKVGTAIEGYRYDAAAGGAYQFVWGTFCDWYLEFAKP-I 661

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQR 492
               +    +        V+ Q+  +L   +P +  +++  +   D +   R + +LD  
Sbjct: 662 FNGGDEAAKAETRATAAWVLDQILHVLHPLMPFITEELWGQIAERDGDLMLRSWPALDGL 721

Query: 493 LKP 495
             P
Sbjct: 722 AAP 724



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 22/175 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + DVL R+ R+ G D L+  GTD  G       +  
Sbjct: 37  PYTIMMPPPNVTGSLHMGHALTFTLQDVLIRYRRMTGKDALWQPGTDHAGIATQMVVERQ 96

Query: 66  GVTTK----------------VFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHDT 105
               K                 +  ++          L  S D     F  T ++     
Sbjct: 97  LEAQKVTRHDLGRDNFIKRVWEWKAESGGTITRQLRRLGASPDWAKERF--TMDEGLSAA 154

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            R ++  +  +G IY+      +  +     +D EV +     +      PV+ M
Sbjct: 155 VRKVFVTLHRQGLIYRAKRLVNWDPKLHTAISDLEVEQREVKGHMWHFRYPVEGM 209


>gi|291278922|ref|YP_003495757.1| valyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753624|dbj|BAI80001.1| valyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 872

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 137/382 (35%), Gaps = 50/382 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           Y +          +       V+      +F ++    +K +   E     I P     +
Sbjct: 332 YLEKIEKHDHSVGHCYRCKTVVEPRISMQWFVKIKPLAEKAIEAVEQGKIKIFPEMWT-K 390

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI--------------PDDPQY--------------I 227
                   ++D  +SR+   WG +I                DP+               +
Sbjct: 391 TYFEWMYNIRDWCISRQ-IWWGHRIPAWYCEKCGHINVDFKDPEKCEKCGSTELTQETDV 449

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP 287
           +  W  +     +T G+ +     + KF+P    V G DIL F    W A ++   L   
Sbjct: 450 LDTWFSSALWPFSTMGWPEKTKTLE-KFYPTSCLVTGFDILFF----WVARMIMMGLKFM 504

Query: 288 KKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             V  +   +H       G+K+SKS GNVIDP+ +IE+ G DA R+ L    A G+D   
Sbjct: 505 NDVPFYHVYIHALVRDQYGQKMSKSKGNVIDPLIMIEKYGADAFRFTLAAFAAQGRDIKL 564

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            +D +    N    N I N  SR + M L D +            D+ IL    +  + +
Sbjct: 565 SEDRIVGYKN--FVNKIWN-ASRFLMMNL-DENISEIDFDNLEMEDKWILHNLYQTAKNV 620

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + +++   + A  ++         D Y +  K       N   A  V   T+E   +  
Sbjct: 621 EKFIKSYDFNEAANEIYQFFWHIFCDWYIEFIKHRIYNNINKTNALAVAKYTLE---ESL 677

Query: 460 ILLQAFVPKLANKIFDILFVAD 481
            +L  F+P +   I+  L   +
Sbjct: 678 KILHPFMPFITEFIYKKLSGKE 699



 Score = 77.1 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 18/180 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+L R+HR+ G +VL+  GTD  G      
Sbjct: 34  SDKPPYSIVIPPPNVTGSLHMGHALNNTLQDILIRYHRMKGFEVLWLPGTDHAGIATQNV 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + +++     +    L  S D      T ++   
Sbjct: 94  VERMLAQEGLSRHDLGREKFIERVWQWREESGGQIINQLKRLGASCDWNRERFTMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  R ++  +  +G IY+  Y   +  R     +D EV            + P++  +E+
Sbjct: 154 NAVRTVFVTLYKEGLIYRSNYIINWCPRCHTALSDLEVEHEDKEGALYYIYYPIENSDEK 213


>gi|307947205|ref|ZP_07662540.1| valyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770869|gb|EFO30095.1| valyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 977

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 124/357 (34%), Gaps = 45/357 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          L   ++     +P        +++   ++   +SR+   W
Sbjct: 449 IEPMLTDQWFADAKKLAQPALKAVQNGSTKFVPGNWDKTYYNWLND-IQPWCISRQ-LWW 506

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I +  D                            ++  W  +     +T G+ D   
Sbjct: 507 GHQIPVWYDEDGTEYCAETEEEAVKLAGGKTLTRDPDVLDTWFSSGLWSFSTLGWPDKTA 566

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKI 303
               +++  D+ + G DI+ F    W A ++   +    +V  H   ++       G+K+
Sbjct: 567 -ELERYYKTDVLITGFDIIFF----WVARMMMQGIHFMDEVPFHTVYINSIVVDKNGKKM 621

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS+GNV+DP+++I+  G DA R+ LV +   G+                 A  + N  +
Sbjct: 622 SKSVGNVLDPLDLIDRFGADATRFALVSQEVQGRRT-LRMSDQAAEGGQRFATKLWN-AA 679

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           R   M   +              +  I +   + +QE+ + +     + A       +  
Sbjct: 680 RFAEMNGCERVSGFDPSTTKHTLNRWIATETGKAIQEVTKALDEYRFNDASGGAYKFIWN 739

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              D Y +  KP      +              + ++  +L  F+P L  ++++ L 
Sbjct: 740 TFCDWYLELAKP-IFNGDDEAAKEETRATAAWALDEILKILHPFMPFLTEELWERLG 795



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--- 63
             I       N   H+GHA    + D+L R+ R+ G D L+  GTD  G  +  A +   
Sbjct: 38  FTIVIPPPNVNGSLHMGHALNNTLQDILIRWKRMQGFDTLWQPGTDHAGIALQIAVERQM 97

Query: 64  -----------------NAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                                T K  +        + +    D S + F  T ++     
Sbjct: 98  AERNEPTRREIGREAFIKRAWTYKEEIGSAIINQLKRLGSSCDWSRERF--TMDEGLSAA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQH 154
            R ++ ++ ++G IYK      +  + E   +D EV     DG  ++ ++
Sbjct: 156 VRKVFVELYNEGLIYKSKRLVNWDPKMETAISDLEVENIETDGHMWHFKY 205


>gi|188584421|ref|YP_001927866.1| valyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347919|gb|ACB83331.1| valyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 906

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 139/370 (37%), Gaps = 16/370 (4%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y N   + + A     + +   V    E+ +F  L   +   +S        I    
Sbjct: 378 DQWYVNVKPLAERALQAVRDGKTRFVPDNYEKIFFQWLENIEPWCVSRQLWWGHQIPVWY 437

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
                I   +S  + L+ ++      + +  DP  ++  W  +     +T G+ D     
Sbjct: 438 DGGGGIFVAESEAEALAQAKAKHGADVALTRDPD-VLDTWFSSALWPFSTLGWPDKTP-E 495

Query: 252 KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            A+F+P +  V GKDI+ F    +      L+   P             KG K+SKS GN
Sbjct: 496 LARFYPTNTLVTGKDIIFFWVARMMMMGLHLTDQAPFDTVYLHTLVRDEKGAKMSKSKGN 555

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+DP+++I+  G DALR+ L    A G+D       ++     + A  + N  +R   M 
Sbjct: 556 VVDPVDLIDRFGADALRFTLAALAAPGRDIKLGPQRVEG--YRNFATKLWN-AARFAEMN 612

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
             +              +   L+  ++ + E+ + +     + A A     V     D Y
Sbjct: 613 GCELKADFRPDAVRETLNAWALTEAAKAVAEVAQAITVYRFNDAAAAAYRFVWNVFCDWY 672

Query: 428 FDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF----DILFVAD 481
            +  KP  L+    +P   +        +I Q+A LL  F+P L  +++      L  + 
Sbjct: 673 LELAKP-VLQGEGVDPAARAETQATVAFLIDQIAKLLHPFMPFLTEELWAIKGQALPTSR 731

Query: 482 ENRCFQSLDQ 491
                +S  +
Sbjct: 732 GLLALESWPE 741



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    I D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  EPFSIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGRDVLWQPGTDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             + T+                +  +           + +    D S + F  T ++   
Sbjct: 96  KLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  +  +G IY+      +  + +   +D EV +            PV
Sbjct: 154 RAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGKLWHFDYPV 207


>gi|260431038|ref|ZP_05785009.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414866|gb|EEX08125.1| valyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 1053

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 22/293 (7%)

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           +E I      L   ++ R        +  DP  ++  W  +    + T G+ +  +    
Sbjct: 586 HEAIHRFAESLAQYAIDRDPTKLVYPVWRDPD-VLDTWFSSGLWPIGTLGWPEQTE-ELQ 643

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL------HKGEKISKSL 307
           +++P D+ + G DIL F    W A ++   L +  ++  H   L       KG+K+SK+ 
Sbjct: 644 RYFPTDVLITGFDILFF----WVARMMMMQLAVVNEIPFHTVYLHQLVRDEKGKKMSKTT 699

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVIDP+E+++E G DALR+      A G      ++ +      +    + N V R   
Sbjct: 700 GNVIDPLEIVDEFGADALRFTNASMAAIGGVLKLSRERI--TGYRNFGTKLWNAV-RFAE 756

Query: 368 MILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           M     D +     A        +  I+   +RV +E+   +++   + A   + + V  
Sbjct: 757 MNEVFTDAVPQLDVADLQPKAAVNRWIIGETARVREEVDAALESYRFNDAANALYAFVWG 816

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              D Y +  KP  L+  + +  +        V+ Q  ILL   +P +  +++
Sbjct: 817 KVCDWYVELSKP-LLQGDDAEAQAETRATMRWVLDQCLILLHPIMPFITEELW 868



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 56/199 (28%), Gaps = 32/199 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ESFCIMIPPPNVTGALHVGHAFNNTLQDILIRWHRMRGFDTLWQPGQDHAGIATQMQVEK 95

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--------------- 92
             +                     +  +      +    L  S D               
Sbjct: 96  KLMAEEGKKRTDYTREEFLAKVWEWKGEYGGTIIEQLKRLGSSCDWSRNAFTMAGAAGDP 155

Query: 93  DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
                     HD    ++  + DKG IY+G     +    E   +D EV       +   
Sbjct: 156 RTGHENSPNFHDAVIKVFVDMYDKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWH 215

Query: 153 QHNPVQWMEEEGYFFRLSA 171
              P+   E   Y  +   
Sbjct: 216 FKYPLAGGETYTYVEKDED 234


>gi|32033514|ref|ZP_00133841.1| COG0495: Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208348|ref|YP_001053573.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976293|ref|YP_001651886.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251268|ref|ZP_07337446.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303252870|ref|ZP_07339029.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247860|ref|ZP_07529896.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307252499|ref|ZP_07534395.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307261357|ref|ZP_07543032.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|166230605|sp|A3N0N2|SYL_ACTP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687565|sp|B0BPF7|SYL_ACTPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126097140|gb|ABN73968.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876394|gb|ABY69442.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648300|gb|EFL78497.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302649810|gb|EFL79988.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306855662|gb|EFM87829.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306860091|gb|EFM92108.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306869088|gb|EFN00890.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 861

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V++G           PV+  E   +F +++ Y ++LL++ 
Sbjct: 151 KKTSTVNWCPNDATVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLTHL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 78/300 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +             A +++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +      P E      D+A     V  E +  +  +L    P +  +++  L   D
Sbjct: 734 NKLTK-----APLE---NEQDKA-----VMAEALSAVVRMLYPITPHICFELWQALGNND 780


>gi|288817614|ref|YP_003431961.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787013|dbj|BAI68760.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751212|gb|ADO44695.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 1008

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 102/285 (35%), Gaps = 22/285 (7%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
             G +     + ++  W  +        G+ +     K   +P DL V G DI+ F    
Sbjct: 547 HCGSERLRQEEDVLDTWFSSALWPFGVFGWPEEAQDLK-NLYPTDLLVTGFDIIFFWVAR 605

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +       + ++P             KG+K+SK+ GNVIDP++++E  G DALR+ L   
Sbjct: 606 MIMMGTYFTGDVPFVDVYIHALVRDEKGQKMSKTKGNVIDPLDIVERYGADALRFTLAIL 665

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G+D    +   +       AN + N     +  + +D    +P        D  I +
Sbjct: 666 TQQGRDIKLSEKRFEG--YKHFANKLWNAGRFILMNLDQDLLANLPYAAPPRSEDLWITT 723

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK--TN-------- 440
             ++ ++++ E +       A   +   V     D Y +  K     K   N        
Sbjct: 724 KLNQTVRKVNEALSQYEFSEAAQALYEFVWSEFCDWYLEMSKLRLYAKPTENLPEEERQK 783

Query: 441 -----PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                     T     +++   +  LL  F+  +  +++  L  +
Sbjct: 784 EEQRIKAERITAQATLLKIFDSVLKLLHPFMCYITEELYSHLPTS 828



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 18/246 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           +  EK  +           H+GHA    + D++ R+ R+ G  V++  G D  G      
Sbjct: 32  QREEKFSVVIPPPNVTGSLHMGHALNATLQDMVCRWQRMMGKKVVWVPGFDHAGIATQYV 91

Query: 59  -------------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
                            +        +V  +    R+  + L +S D      T ++   
Sbjct: 92  VDKKLQQEGKDRLEVGREEFLKEVWKWVPISRGAIREQLEKLGVSVDWKRERFTLDEGFS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              R  ++K+ + G IY+G Y   +   D    +D EV    +         P++     
Sbjct: 152 RAVRYAFRKLYEDGLIYRGEYIVNWCPNDLTALSDLEVEHEEEDGKLYYIKYPLEDASGY 211

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
                         +    HP+         + +       K  ++S +     I I  D
Sbjct: 212 ITVATTRPETMLGDTAVAVHPQDERYKHLVGKRVRLPLVSWKRKAMSGEEVSEYIPIVAD 271

Query: 224 PQYIMY 229
              +  
Sbjct: 272 ESVLSD 277


>gi|307245736|ref|ZP_07527822.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307254707|ref|ZP_07536535.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259149|ref|ZP_07540879.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306853438|gb|EFM85657.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306862380|gb|EFM94346.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866816|gb|EFM98674.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 861

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V++G           PV+  E   +F +++ Y ++LL++ 
Sbjct: 151 KKTSTVNWCPNDATVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLTHL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 78/300 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +             A +++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +      P E      D+A     V  E +  +  +L    P +  +++  L   D
Sbjct: 734 NKLTK-----APLE---NEQDKA-----VMAEALSAVVRMLYPITPHICFELWQALGNND 780


>gi|170718612|ref|YP_001783813.1| leucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189030281|sp|B0URM9|SYL_HAES2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168826741|gb|ACA32112.1| leucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 860

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAEGAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    ++          +D  I T +  ++   +  + ++  KG +YK
Sbjct: 92  KNKTAPAKWTYENIEYMKNQLKVLGFGFDWDREITTCKPEYYKWEQWFFTELYKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   DE    +++V++G           PV+  E   +F +++ Y ++LLS  +
Sbjct: 152 KTSTVNWCPNDETVLANEQVHEG----GCWRCDTPVEQKEIPQWFIKITDYAEQLLSDLD 207

Query: 182 SHPEFILPIERRNEVISFVKSG 203
             PE+   ++           G
Sbjct: 208 QLPEWPDMVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 73/178 (41%), Gaps = 20/178 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++       AN     
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLRR 672

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           +   V    ++       P A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 673 LWNLVFEYNQNPAQTALDPTALSVEQKALRREVHKTIAKVSDDIGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++++ +               DRA     V  E +  +  +L    P +  +++  L 
Sbjct: 733 MNKLTK--------ASLSNEQDRA-----VMAEALNAVVRMLYPITPHICFQLWQDLG 777


>gi|229161182|ref|ZP_04289169.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228622278|gb|EEK79117.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 1033

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 138/389 (35%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P                   +     
Sbjct: 452 TPLNVWECESC---DHQFAPKSIADLREHSTKETPE-------DLELHKPYVDEVQVCCE 501

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 502 KCGGTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L  Y+          + DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDKYNPNETYDVKRMKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               EV+  ++ L+  F P +A  +   L
Sbjct: 738 DTLHEVLVTISKLIAPFTPFVAEDVHLNL 766



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMVGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|329850466|ref|ZP_08265311.1| valyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840781|gb|EGF90352.1| valyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 901

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/319 (18%), Positives = 115/319 (36%), Gaps = 10/319 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E+ YF  +   +   +S        I      +  I    S    L  ++  +     + 
Sbjct: 403 EKTYFEWMRNIEPWCVSRQLWWGHRIPAWYGPDGTIFVEMSEADALKAAQAHYGKATPLK 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     +T G+ D  D  K +F+P    + G DI+ F    +      
Sbjct: 463 QDED-VLDTWFSSALWPFSTMGWPDKTDDLK-RFYPTHTLITGFDIIFFWVARMMMMGLH 520

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +   P  +   +      KG+K+SKS  NV+DP+ +I+E G DALR+ +      G+D 
Sbjct: 521 FTGEAPFKRVFINALVRDEKGQKMSKSKNNVMDPLVLIDEFGADALRFTMTAMSGQGRDI 580

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
              K  ++     +    + N    +        DG  P     T S   I     +   
Sbjct: 581 KLSKQRIEG--YRNFGTKLWNATRFAQMNECARVDGFDPASARLTLS-RWIRGEVQKTQA 637

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +   ++      A   +   +     D Y +  KP  L   +    + +  +T  V+ Q
Sbjct: 638 ALTAALEACAFDDAANVLYRFIWNVFCDWYLELAKP-ILNGDDEVATTEIRAMTAWVLDQ 696

Query: 458 LAILLQAFVPKLANKIFDI 476
             ++L   +P +  +++  
Sbjct: 697 AMVMLHPVMPFITEELWQQ 715



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 59/170 (34%), Gaps = 24/170 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA    + DVL RF R+ G   L+  GTD  G       + 
Sbjct: 34  ETFSIVIPPPNVTGNLHVGHALNNTLQDVLTRFERMRGKAALWLPGTDHAGIATQMVVER 93

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +        R  R +    D S + F  T ++   
Sbjct: 94  QLAAAGNIGRRDMGREAFVAKVWEWKAESGGNIVRQLRRLGASCDWSRERF--TLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNA 152
              R ++ ++   G +Y+      +  + +   +D EV +   DG Y++ 
Sbjct: 152 AAVRKVFVQLHRDGLMYRDKRLVNWDPQFQTAISDLEVEQKEVDGHYWHF 201


>gi|83589432|ref|YP_429441.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725764|sp|Q2RKZ1|SYL_MOOTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83572346|gb|ABC18898.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 829

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 31  DKPKFYCLEMFPYPSGNLHMGHVRNYSIGDVVARVKRMRGYNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+    +   N  N R     + ISY  D  + T    ++   + L+ ++   G  Y
Sbjct: 91  IHRGIPPAEWTWSNIANMRRQLHAMGISYDWDREVATCHPNYYRWTQWLFLQMYKHGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +         +++V  GA        H PV   + E +FFR++ Y D+LL   
Sbjct: 151 RKKAAVNWCPSCATVLANEQVVDGA----CERCHTPVMRKDLEQWFFRITDYADRLLEDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++   E      SG
Sbjct: 207 KKLPGWPDKVKIMQENWIGKSSG 229



 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 105/271 (38%), Gaps = 31/271 (11%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY------- 274
           D              Y +        +  K  +W   D ++ G +    H +Y       
Sbjct: 495 DTMDTFVCSSWYFLRYTSPHSQDRAFERDKVDYWMNVDQYIGGVEHAILHLMYARFFTKA 554

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              F L       + + + G +L  G K+SKS GN++ P E+I   G D  R F++    
Sbjct: 555 LHDFGLVGVEEPFQNLLTQGMVLKDGSKMSKSKGNIVSPEEIINRYGADTARLFILFAAP 614

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---TESDESIL 391
             +D  +   G++         G    ++R   ++    D +    G+    + +D  + 
Sbjct: 615 PERDLEWSDQGVE---------GCYRFLNRVWRLVGSYADAVRRAGGSLEIRSHADRELW 665

Query: 392 SVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +    ++++ E+++     + A++ ++ LV+   RY D           P+    ++ +
Sbjct: 666 RLLHATIKKVTEDVEERFNFNTAISAIMELVNGCYRYQDTV---------PEEEQNLVLM 716

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             EV+R+L  LL  F P +  +++  L   +
Sbjct: 717 G-EVLRKLVTLLAPFAPHITEELWQGLGGQE 746


>gi|254787750|ref|YP_003075179.1| leucyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237683615|gb|ACR10879.1| leucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 834

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y      YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 45  TSKEKFYCLAMFPYPSGRLHMGHVRNYTITDVIARFQRMQGKNVLHPMGWDAFGLPAENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N+   R     L   +D    + T +  ++   +  + ++ +KG  
Sbjct: 105 AIKNNTAPAKWTYANTDYMRSQLKELGFGFDWTREVTTCKPDYYRWEQWFFTRLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V +G           PV+  E   +F R++ Y ++LL  
Sbjct: 165 YKKVSAVNWCPNDQTVLANEQVVEG----CCWRCDTPVERKEIPQWFIRITDYAEELLKD 220

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   +    +       G
Sbjct: 221 LDKLPHWPEQVRTMQKNWIGKSKG 244



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 105/275 (38%), Gaps = 34/275 (12%)

Query: 232 IDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY-------WPAFLL 280
               + Y             D  KA +W P D +V G +    H +Y            L
Sbjct: 511 FMESSWYYARYAGPSSESMIDSDKANYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGL 570

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            A     +++   G +L  G K+SKS GN +DP E+I + G D +R F +      +   
Sbjct: 571 VACDEPFERLLCQGMVLKDGTKMSKSKGNTVDPAELIGQYGADTVRLFTMFAAPPEQSLE 630

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +   G++       A      + ++V   L   +     P    ++ + +       + +
Sbjct: 631 WTDSGVEG------AFRFLKKLWKTVQTHLAAGEPGELNPAELNDTQKDLRRKTHETIAK 684

Query: 401 IRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL-YVTVEVIRQL 458
           + ++   +   + A+A V+ L++EV R             N DRA+     V  E +   
Sbjct: 685 VTDDYGRRQTFNTAIAAVMELLNEVGR-------------NADRANEQGLSVEREALEAA 731

Query: 459 AILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
             +L   VP + ++++  L  ++   +  + + D+
Sbjct: 732 VQVLAPIVPHICHELWLALGHSEPVLDVTWPAADE 766


>gi|85715502|ref|ZP_01046483.1| valyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85697697|gb|EAQ35573.1| valyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 938

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 134/389 (34%), Gaps = 29/389 (7%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
             +  +   GD           L D+ Y +  E+ + A     + +   V    E+ YF 
Sbjct: 346 EPYAHMVPHGDRSNAVIE--PYLTDQWYVDAKELARPAMAAVRSGETTFVPKNWEKTYFE 403

Query: 168 RLSAYQDKLLSYYESHPE----FILPIER----RNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   Q   +S           +  P  +      E  +   +    +     T + G +
Sbjct: 404 WMENIQPWCISRQLWWGHQIPAWYGPDGKVFVAETEAEAIGHALGYYVEQGVITAEQGAE 463

Query: 220 IPDDP----------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
           +  DP          + ++  W  +     +T G+ D       +++P ++ V G DI+ 
Sbjct: 464 MARDPAKRDGFITRDEDVLDTWFSSALWPFSTLGWPDKTP-ELNRYYPTNVLVTGFDIIF 522

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +           P             KG K+SKS GNVIDP+ ++++ G DALR+
Sbjct: 523 FWVARMMMMGIHFMQQAPFSTVYIHALVRDEKGAKMSKSKGNVIDPLHLVDKYGADALRF 582

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L      G+D       ++     + A  + N   R   M             A    +
Sbjct: 583 TLAAMAVQGRDIKLSPQRVEG--YRNFATKLWN-ACRFAEMNECVLPPDFDATAAKETLN 639

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
             I+   +R   E+ E +++   + A   +   V     D Y +  KP  +   +    S
Sbjct: 640 RWIVHETARATCEVTEAIESSRFNDAAGALYRFVWNVYCDWYLELAKP-VISGEDGPAKS 698

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               +      ++  LL  F+P +  +++
Sbjct: 699 ETRAMVAWARDEILKLLHPFMPFITEELW 727



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 57/178 (32%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E   I           H+GHA    + DVL RF R+ G DVL+  GTD  G      
Sbjct: 19  REAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTDHAGIATQMV 78

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +      +               V Q             + +    D S + F  T ++
Sbjct: 79  VERQLAERQEPGRRDMGRARFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDE 136

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++ ++   G IYK      +  +     +D EV +            P++
Sbjct: 137 GLSRAVAKVFVELHRAGLIYKDKRLVNWDPKLLTAISDLEVKQVEVKGSLWHLRYPIE 194


>gi|291060395|gb|ADD73130.1| valyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 984

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 139/376 (36%), Gaps = 49/376 (13%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E                ++      +F ++     + L+ ++       P +  N  + 
Sbjct: 404 REERIVHSVGVCYRCEAVIEPYLSLQWFVKMKPLASQALAAWKRADVQFHPKKWENTYVR 463

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMY 229
           +++  ++D  +SR+   WG +IP                              DP  ++ 
Sbjct: 464 WLEH-IRDWCISRQ-LWWGHRIPVWYCAQCAQQTVSRVDVQRCAHCGSADITQDPD-VLD 520

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
            W  +     +T G+       +A F+P    +   DI+ F    W A ++ A L   + 
Sbjct: 521 TWFSSWLWPFSTLGWPQETQKLRA-FYPTSAVITAYDIIFF----WVARMIMAGLEFTQT 575

Query: 290 VFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           V      LH      +G K+SKSL N +DP+ +I   G DALR+ L    A G+D   + 
Sbjct: 576 VPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMCAQGQDVLIEM 635

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D  K  + +  AN + N  SR +   L+          + TE D  I    +  +Q++R 
Sbjct: 636 DSFK--MGSRFANKVWN-ASRYILGNLEGRRVYAIAHVSLTELDRWIFHTFNETVQQVRT 692

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++    + A   V         D Y +A K    +K +         V   ++ +   L
Sbjct: 693 ALEAYRFNDAAQAVYEFFWNSFCDWYVEASK-CSFQKPDEQEKDRAASVLCTLLEETLRL 751

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 752 LHPFLPFVTEEIYRSL 767



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 23/187 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAK 60
               I+          H+GH    ++ D++ R+ R+ G   L+  GTD  G      + +
Sbjct: 88  RTFVIAIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVER 147

Query: 61  AAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A +  G+  +    +                     R M    D + + F  T +     
Sbjct: 148 ALRKEGIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERF--TLDAGMSA 205

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG-ADGQYYNAQHNPVQWMEEE 163
           + R  +  + ++G +Y+  Y   +  R     +DDEV+    DG  Y  ++  +   EEE
Sbjct: 206 SVREAFVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEE 265

Query: 164 GYFFRLS 170
           G      
Sbjct: 266 GNGVPPP 272


>gi|87200859|ref|YP_498116.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136540|gb|ABD27282.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 904

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 132/367 (35%), Gaps = 45/367 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +    S    I+P        ++++  ++   +SR+   W
Sbjct: 388 IEPWLTDQWYVDAETLAKAPMEAVRSGAIEIVPKTWEKTFFNWME-NIQPWCVSRQ-LWW 445

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +      T G+ D  
Sbjct: 446 GHRIPAWYGSDGQCYVAESEEEAQAKAGADVTLTRDEDVLDTWFSSALWPFATLGWPDED 505

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                K +P DL V G DIL F    +          +P  K           G K+SKS
Sbjct: 506 APLLKKHYPNDLLVSGFDILFFWDARMAMQGLHFMKEVPWKKLYLHGLVRAADGAKMSKS 565

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I++ G DALR+F+    + G+D   D+  ++     + A  + N      
Sbjct: 566 KGNVVDPLGLIDKYGADALRFFMCAMESQGRDVKMDEKRVEG--YRNFATKLWNAARFCQ 623

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           S  +      +  P A +  ++ I+      +  + + M +     A   +   V +   
Sbjct: 624 SNGITG-STSVAAPAATSAVNKWIIGEVVETVAALDQAMADLRFDAAANAIYHFVWDQFC 682

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           D Y +      L K + D  +    V   V+ Q+ ++L  F+P +  +++  L   D   
Sbjct: 683 DWYIE------LIKGSFD--TETKAVAGWVLDQILVMLHPFMPFVTEELWHALGERDGEL 734

Query: 485 CFQSLDQ 491
              +  +
Sbjct: 735 IVAAWPK 741



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           + +   I           HIGHA +  + DV  R+ RL G D L+  G D  G       
Sbjct: 42  DAQPYTIVNPPPNVTGSLHIGHALDNTLQDVAIRYERLRGKDALWVVGMDHAGIATQMVV 101

Query: 60  ------KAAQNAGVTTKVFVDQNSRNFRD-------MADVLDISYD--DFIRTTEKRHHD 104
                 +  +    T + FV++      +           L  S D      T +     
Sbjct: 102 ERQMEARQDKRTNYTREQFVEKVWEWKAESGGAITGQLRRLGCSMDWSREQFTMDPHFTR 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++  + ++G IY+      +  + +   +D EV        +     P+
Sbjct: 162 AVVKVFVDLYNQGLIYRDKRLVNWDPKLKTAISDLEVETREVQGGFWHFKYPL 214


>gi|281358130|ref|ZP_06244614.1| valyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315503|gb|EFA99532.1| valyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 886

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 133/391 (34%), Gaps = 39/391 (9%)

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
              + +E    +          Y      P++ +    +F  +       +   +S    
Sbjct: 327 CVKMMEEQGLLEKVEEIRHAVGYSERGDVPIETLVSYQWFCNMKELAKPAIEAVKSGRIK 386

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-----------------------PDD 223
             P  R ++        ++D  +SR+   WG +I                          
Sbjct: 387 FYPE-RWSKTYFHWMENIQDWCISRQ-IWWGHRIPAWYNDENGEVYVGLEAPTAPGKWRQ 444

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +  G+       K  F+P    V G DI+ F    +        
Sbjct: 445 EEDVLDTWFSSWLWPFSIMGWPKETPELK-YFYPTCDLVTGPDIIFFWVARMIMAGCEFM 503

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P     F+      +G K+SKSLGN  DP++VI   G DALR+ +V     G D  Y
Sbjct: 504 KEIPFRNVYFTSIIRDEQGRKLSKSLGNSPDPLDVIATYGADALRFTIVYIAPVGMDIRY 563

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGA-FTESDESILSVCSRVL 398
             +  +  +    AN + N          + K++  +     A  +  +  +L+     +
Sbjct: 564 SNEKCE--IGKTFANKLWNACRFRQMQGEVSKEFRELPADVAANLSGDERWMLARLDATI 621

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVI 455
           + I   +     H A  ++  LV     D + +A+K P        +RA TV       +
Sbjct: 622 ESINAALAEFRFHSAAHELYELVWTSFCDWFIEAEKVPMRAGGAEKERALTV---LDYAL 678

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCF 486
            ++  LL  F+P +  ++   +    E    
Sbjct: 679 FRILRLLHPFMPFITEELAHQMGFVAEGDSI 709



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 61/174 (35%), Gaps = 19/174 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I            +GH     + D+L R+HR+ G +V +  GTD  G       
Sbjct: 37  DKKPYSIVIPPPNVTGILTLGHVLNNTLQDILCRYHRMKGEEVCWFPGTDHAGIATEARV 96

Query: 63  QNAGVTT----------KVFVDQNSRNFRDMADV---------LDISYDDFIRTTEKRHH 103
           +                + F+ +  +   +                 ++    T ++   
Sbjct: 97  EKYLRKEENTGRDELGREEFIRRVWQWKGEFGGKIIRQLRTLGCSCDWERERFTMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ +KG IY+G     +    ++  +D+EV       ++     P+
Sbjct: 157 EAVKKVFVELYNKGYIYRGQRMINWCPVAKSALSDEEVIYKDVAGHFWHFRYPL 210


>gi|308125801|ref|ZP_07663528.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308113950|gb|EFO51490.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 364

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 12/224 (5%)

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE-IACGKDGFYDKDGLKK 348
           +F HG++   G K+SKS G  +     ++ +  + LRY+   +  +   D   + +   +
Sbjct: 1   MFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLNSRIDDLDLNLEDFTQ 60

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           RVNAD+ N I NL SR+   I K ++G +    A  E     ++   R    I E  + +
Sbjct: 61  RVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAAADR----IAELFEAR 116

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFV 466
              RA+ ++ +L  + ++Y D + PW + K          +  V + + R L   L+  +
Sbjct: 117 EFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVLMTYLKPVM 176

Query: 467 PKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           P LA +    L    +   ++ + Q L  G  + K F  +F R 
Sbjct: 177 PALAARTEAFLN---QELTWEGIAQPLT-GHEITK-FKALFNRI 215


>gi|217977850|ref|YP_002361997.1| valyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217503226|gb|ACK50635.1| valyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 902

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 129/361 (35%), Gaps = 57/361 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L    S     +P         +++  ++   +SR+   W
Sbjct: 372 IEPWLTDQWYVNAKVLAQPALEAIRSGKAQFIPKNWEKTYFDWLE-NIEPWCVSRQ-LWW 429

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 430 GHQIPAWYGPDGAIFVAADEAEASEAARAHYGAPTPLQRDPDVLDTWFSSALWPFSTLGW 489

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------ 298
            D+    K +++P  + + G DI+ F    W A ++   L    +V      LH      
Sbjct: 490 PDDASELK-RYYPTSVLITGFDIIFF----WVARMMMMGLHFMGEVPFRDIYLHALVRDQ 544

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D       ++     + A  I
Sbjct: 545 KGAKMSKSKGNVIDPLELIDQYGADSLRFTLAAMAAQGRDVKLATQRVEG--YRNFATKI 602

Query: 359 GNLVSRSV---SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            N    +     + +K +D            +  I+   ++ + E+   ++    + A  
Sbjct: 603 WNAARFAEINGCVRVKGFDPKSVKIA----LNAWIIGEAAKAVGEVTAAIKTYRFNDAAN 658

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                V     D + +  KP  L+  +          T  V  ++  LL  F+P L  ++
Sbjct: 659 AAYRFVWNIFCDWHLELAKP-LLQGPDGAAKDETRAATAFVFDEILKLLHPFMPFLTEEL 717

Query: 474 F 474
           +
Sbjct: 718 W 718



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I           H+GHA    + D+LARF R+ G DVL+  GTD  G      
Sbjct: 33  KAAEPFAIVIPPPNVTGALHMGHALNATLQDILARFERMRGKDVLWQPGTDHAGIATQTV 92

Query: 62  AQNAGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +   +  +                +  +           + +    D S + F  T ++
Sbjct: 93  VERQLMERQEPGRREMGREKFLERVWAWKTASGGAIVEQLQRIGASCDWSRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                   ++ ++  +G IYK      +        +D EV +     +    + PV
Sbjct: 151 GLSRAVVKVFVQLFREGLIYKDKRLVNWDPALLTAVSDLEVVQVETKGHLWHFNYPV 207


>gi|163854090|ref|YP_001642133.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665695|gb|ABY33062.1| valyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 906

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/321 (21%), Positives = 125/321 (38%), Gaps = 13/321 (4%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIP 221
           E  FF+     +      +      +P+    E  I   +S    ++ ++      + + 
Sbjct: 408 EKIFFQWLENIEPWCVSRQLWWGHQIPVWYDAEGGIFVAESEADAVAQAKAKHGREVALT 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     +T G+ D      A+F+P +  V GKDI+ F    +      
Sbjct: 468 RDPD-VLDTWFSSALWPFSTLGWPDKTP-ELARFYPTNTLVTGKDIIFFWVARMMMMGLH 525

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+   P             KG K+SKS GNV+DP+++I+  G DALR+ L    A G+D 
Sbjct: 526 LTDQAPFETVYLHTLVRDEKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAALAAPGRDI 585

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                 ++     + A  + N  +R   M   +              +   L+  ++ + 
Sbjct: 586 KLGPQRVEG--YRNFATKLWN-AARFAEMNGCELKADFRPEAVRETLNAWALTEAAKAVA 642

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVI 455
           E+ + +     + A A     V     D Y +  KP  L+    +P   +        +I
Sbjct: 643 EVAQGITVYRFNDAAAAAYRFVWNVFCDWYLELAKP-VLQGEGVDPAARAETQATVAFLI 701

Query: 456 RQLAILLQAFVPKLANKIFDI 476
            Q+A LL  F+P L  +++ I
Sbjct: 702 DQIAKLLHPFMPFLTEELWAI 722



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    I D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  EPFSIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             + T+                +  +           + +    D S + F  T ++   
Sbjct: 96  KLMETQQPGRRELGREEFLRRVWAWKEESGGTIIGQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  +  +G IY+      +  + +   +D EV +     +      PV
Sbjct: 154 RAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPV 207


>gi|110679054|ref|YP_682061.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|109455170|gb|ABG31375.1| valyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 1031

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 108/289 (37%), Gaps = 19/289 (6%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFH- 271
           + +  DP  ++  W  +    + T G+  +      + +  K++P    + G DI+ F  
Sbjct: 575 VSLRRDPD-VLDTWFSSGLWPIGTLGWTGDAELDAQNDALQKYFPTSTLITGFDIIFFWV 633

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +    + ++   P             KG+K+SKSLGNVIDP+++I+E G DA+R+ L 
Sbjct: 634 ARMMMMQYAVTGQKPFSTVYVHALVRDEKGKKMSKSLGNVIDPLDMIDEFGADAVRFTLT 693

Query: 331 REIACGKDGFYDKDGLKKRVN--------ADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
              A G+D       +    N           A        R+    +       P    
Sbjct: 694 AMAAMGRDLKLSTQRIAGYRNFGTKLWNACRFAEMNEVFAQRAARTDVIPTQNRPPA-DV 752

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
               ++ I+   ++V +EI   ++N   + A     + V     D Y +  KP      N
Sbjct: 753 EQAVNKWIIGETAKVREEIDAALENYRFNDAANAAYAFVWGKVCDWYVELSKPLLQDAAN 812

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            + A+        V+ Q  ILL   +P +   ++      DE       
Sbjct: 813 AEFAAETRATMAWVLDQCMILLHPIMPFITEDLWAQTGRRDEMLVLTDW 861



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 31/181 (17%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  GTD  G       + 
Sbjct: 37  ETFSIMIPPPNVTGSLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTDHAGIATQMVTER 96

Query: 65  AG----------VTTKVFVDQNSRNF-----------RDMADVLDISYDDF---IRTTEK 100
                       +T   FV +  +             + +    D S + F       + 
Sbjct: 97  EMAANGEGRRQDMTRDDFVARVWQQKVKSRGTIIGQLKRLGASCDWSREAFTMGGAPGDP 156

Query: 101 R------HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQ 153
                   HD    ++  + +KG IY+G     +    E   +D EV     DG  ++ +
Sbjct: 157 DAGNGPNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFK 216

Query: 154 H 154
           +
Sbjct: 217 Y 217


>gi|145630005|ref|ZP_01785787.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144984286|gb|EDJ91709.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 703

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229



 Score = 40.9 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 54/178 (30%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGFVTSEEPADK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++    ++      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTLVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           S  N IDP E++E+ G D +R F++          + + G++          + NLV 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRVWNLVY 678


>gi|268316289|ref|YP_003290008.1| valyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333823|gb|ACY47620.1| valyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 895

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 131/368 (35%), Gaps = 48/368 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M    +F R+    +  +           P    NE   +++  ++D  +SR+   W
Sbjct: 361 IEPMLSRQWFVRMKPLAEPAIEAVRRGEIRFYPERWANEYFRWME-NIRDWCISRQ-IWW 418

Query: 217 GIKI----------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +I                                + ++  W  +      T G+ D  
Sbjct: 419 GHRIPVWYYTDENGQIDESKGFVVSIEQPEPGMVQDEDVLDTWFSSWLWPFATLGWPDQT 478

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                 F+P  + V G DIL F    +       +  +P      +       G  +SKS
Sbjct: 479 P-DLEYFYPTTVLVSGYDILFFWIARMIMAGIHFTGKIPFRDVFITGMVKDKYGRWMSKS 537

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+E+I++ G DA+RY L      G+D   D    +  +  + AN I N  +   
Sbjct: 538 LGNGIDPLEMIDQYGADAVRYSLTVLCTQGQDIKLDPSKFE--MGRNFANKIWNAFNVFG 595

Query: 367 SMILKDYD-------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +  D +                +  +  +++  ++ +  + E +    ++ AL  +  
Sbjct: 596 QFMETDDEGRPLRDYRRQRRFEELSLVERWMVTRLNQTIATVNEAIDRYRLNEALLTIYD 655

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L      D Y +  KP   +  + +     + + VE+  ++  LL  F+P +   ++  L
Sbjct: 656 LFWGDYCDWYLELIKPPRGQAMDDE----TIALAVELYEKMIQLLHPFMPFITEALWWRL 711

Query: 478 FVADENRC 485
               E   
Sbjct: 712 RPRGEREA 719



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    I         + H+GHA +  I D L R  R+ G + L+  G D  G       
Sbjct: 42  DRTPFVIMMPPPNVTGRLHMGHALQDTIQDALTRIRRMQGYEALWLPGIDHAGIATQNVV 101

Query: 63  QNAG---------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +                           + + D   +  R + D  D S   F  T ++ 
Sbjct: 102 ERELREKEGKTRHDLGREAFLQRVWQWKEEYGDIILQQKRRLGDSCDWSRTRF--TMDEG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  + ++ ++G IY+G Y   +   D+   +D+EV       +      P+
Sbjct: 160 FTRAVQEAFIRLYNEGLIYRGDYLVNWCPVDQTALSDEEVDNVEQDGHLWYIRYPL 215


>gi|92117373|ref|YP_577102.1| valyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800267|gb|ABE62642.1| valyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 954

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/342 (19%), Positives = 123/342 (35%), Gaps = 28/342 (8%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +    +WME    +                 P+  + +    E  +   +        
Sbjct: 410 NWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGKVFVA-ETEDEAVGHALGYYAEQG 468

Query: 211 RKTFDWGIKIPDDP----------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
             + D G ++  DP          + ++  W  +     +T G+ D     K +++P + 
Sbjct: 469 VISVDEGAEMARDPAKREGFITRDEDVLDTWFSSGLWPFSTLGWPDETPELK-RYYPTNA 527

Query: 261 HVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPI 314
            V G DI+ F    W A ++   +   ++V      +        G K+SKS GNVIDP+
Sbjct: 528 LVTGFDIIFF----WVARMMMMGIYFMREVPFSTVYIHALVRDENGAKMSKSKGNVIDPL 583

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            ++++ G DALR+ L    A G+D       ++     + A  + N   R   M      
Sbjct: 584 HLVDKYGADALRFTLAAMAAQGRDIKLSPQRVEG--YRNFATKLWN-ACRFAEMNDCVVP 640

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
                  A    +  I+   +R   EI E ++    + A   +   V     D Y +  K
Sbjct: 641 AQFDPTVAKETLNRWIVHETARATCEITEAIEAYRFNDAAGAIYRFVWNVYCDWYLELAK 700

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           P  +   +    S    +      ++  LL  F+P L  +++
Sbjct: 701 P-VMMGEDGPAKSETRAMVAWARDEILKLLHPFMPFLTEELW 741



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 58/178 (32%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GHA    + DVL RF R+ G DVL+  GTD  G      
Sbjct: 33  RDAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +   +  K               V Q             + +    D S + F  T ++
Sbjct: 93  VERQLMERKEPGRREMGRARFLERVWQWKAESGGVIVNQLKRLGASCDWSRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++ ++   G IYK      +  +     +D EV +            P++
Sbjct: 151 GLSRAVAKVFVELHRAGLIYKDKRLVNWDPKLLTAISDLEVKQIEVKGSLWHLRYPIE 208


>gi|154148039|ref|YP_001406781.1| valyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804048|gb|ABS51055.1| valyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 874

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/404 (19%), Positives = 151/404 (37%), Gaps = 58/404 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + + F      ++ +    +      P    N   +     LKD  
Sbjct: 345 YCYRCKNVVEPYISKQW-FVKKEIANEAIKAVNNGGAEFFPTHWIN-SFNAWMRELKDWC 402

Query: 209 LSRKTFDWGI------------------------------KIPDDPQYIMYVWIDALTNY 238
           +SR+   WG                               K+  DP  ++  W  +    
Sbjct: 403 ISRQ-LWWGHQIPVFYCDECGFEWASEEEMPEICPKCGSKKLHQDPD-VLDTWFSSGLWP 460

Query: 239 LTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
           ++T G+ +          +    +F+P  + + G DIL F    +++     +  LP   
Sbjct: 461 ISTLGWGNGDELKNEKWFENDLKEFYPNTMLITGFDILFFWVARMFFQCEEATKKLPFHD 520

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                      G+K+SKS GNVIDPI+ I E   D LR+ L      G+D    ++ L  
Sbjct: 521 VYLHALVKTSDGKKMSKSSGNVIDPIDKINEYSADILRFTLALLCIQGRDIRLSEEKLI- 579

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
            +  +  N + N   + + +    +D +       TE  + +LS  +  ++ +REN++N 
Sbjct: 580 -LVRNFTNKLYN-AHKFLLLNASKFDDL-SQCEIKTELGKYLLSRFNECVKCVRENLENY 636

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A  ++   +       D    W ++ +  ++  + +     + ++   LL  F+P 
Sbjct: 637 RFNDAATEIYKFLW------DEFCDWGIELSKAEK--SAITELGAIFKEAMKLLNPFMPF 688

Query: 469 LANKIFDILFVAD-ENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           L+  ++  L   D EN     +D+  + G +  KT   IF   +
Sbjct: 689 LSEYLYQNLSGTDLENTTSIMIDKYPQAGEINEKTEK-IFSLII 731



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 22/169 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I           HIGHA    + D++ R+ R+DG   L+  G D  G      
Sbjct: 34  KKGKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGFKCLYQPGMDHAGIATQNV 93

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    K++  +        +  R +      S   F  T ++ 
Sbjct: 94  VEKRLLAQGIKKEELGREKFLEKIWEWKEQSGGTILKQMRLLGITPAWSRTRF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
                +  +  + DKG I +G Y   +   D A  + +  +K   G+ Y
Sbjct: 152 LKKAVKKAFVHLYDKGLIVRGNYMVNWCTHDGALSDVEVEHKEHKGKLY 200


>gi|269961555|ref|ZP_06175917.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833596|gb|EEZ87693.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 857

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 113/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFIL------------------------------------HKGE-- 301
           ++++ P  K++   G +L                                    ++G   
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVKVERDGKGRITSATDNEGRNV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 EHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V+              A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVNTHASKGAAESVDTAALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  +D +N  + + D++
Sbjct: 772 TALGESDIDNAVWPTFDEK 790


>gi|331247157|ref|XP_003336208.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309315198|gb|EFP91789.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 291

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 79/256 (30%), Positives = 138/256 (53%), Gaps = 13/256 (5%)

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            + FHAIYWPA L++A +PLPK + +HG      EK+SKS+GNV+DP + ++E GVD +R
Sbjct: 33  QIIFHAIYWPAILMAAGIPLPKHIIAHGHWKIDEEKMSKSIGNVVDPFKAMDEWGVDGVR 92

Query: 327 YFLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--------DGMI 377
           Y+L+R   +   D  +  + L +    DL   +GNL++R  +  L +           ++
Sbjct: 93  YYLMRAPGSLWGDSDWAPNRLDEHYRKDLLGQLGNLLARISAPKLWNRLPPGRRSGASIL 152

Query: 378 PTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
             PG+ TE +  +S+  +  ++  E+  +M++  I +AL  +  +++  +R      PW 
Sbjct: 153 FPPGSKTEIEGADSLQRLLLQLPGELDGHMKSFEIPKALKSIFDVLAGANRLIQDTAPWH 212

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            + T PD A   ++++ E +R   ILLQ F+P  A ++ D L VA + R +  L   L  
Sbjct: 213 -ESTTPDDAYQAIHLSAEALRISGILLQPFIPAKAAQLLDSLGVAQDGRTWSHLALGLGT 271

Query: 496 GFMLHKTFDP-IFPRF 510
           G ++ +     +FP+ 
Sbjct: 272 GSVVREGGGGLLFPQL 287


>gi|308233828|ref|ZP_07664565.1| valyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943802|ref|ZP_08241267.1| valine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491771|gb|EGF23545.1| valine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 895

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 135/391 (34%), Gaps = 43/391 (10%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             ++    D          +       ++    + +F  +   +        S      P
Sbjct: 326 WFEDHGLLDHIEDLNHSVMHCYRCDTALEPWLSQQWFVAVDKLKTPAKEAVTSQEIKFHP 385

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY------------------- 226
             R  +        LKD  +SR+   WG +I      D  +                   
Sbjct: 386 S-RWTQTYLTWMDNLKDWCISRQ-LWWGHRIPVFTCADCGWEDACLEDVAVCPHCSSSHV 443

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +      T G+  + D  KA   P  + V  +DI+      +   +  
Sbjct: 444 SQDENVLDTWFSSQLWTFATQGWPFSSDELKAHH-PTKVLVTARDIIALWVARMIMSSLY 502

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +  +P          +   G ++SKS GN ++P+++I++ G DA+RY L+  I   +D 
Sbjct: 503 FTHEIPFKDVYIYATILAKDGSRMSKSKGNGVNPMDLIDKYGADAMRYNLLTLITTNQDV 562

Query: 340 FYD------KDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILS 392
            +D         LK+    D A      +  +   +  +  D +   P A T  D  +LS
Sbjct: 563 KFDAVIDKKTKQLKESPRTDQARSFITKIWNASRFVHMNLQDYVPGKPCAQTMEDAWMLS 622

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             + V+++  E ++          + S       D Y +  K   L  T  ++   V   
Sbjct: 623 RLAAVVKKTTEQLETYAFGDYARDIQSFFWNEVCDWYIELCKGRLLNGTADEKLQ-VQRN 681

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            V V+     LL   +P +  +I+D+L V+ 
Sbjct: 682 LVFVLDTALRLLHPVIPFVTEEIWDMLPVSG 712



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 48/169 (28%), Gaps = 20/169 (11%)

Query: 9   ISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +  I  PN     H+GHA +  I D   R++R+ G    +  GTD  G           
Sbjct: 36  CTVVIPPPNVTGILHMGHAMDDTIQDTYIRYNRMRGRSTRWILGTDHAGIATQTKVDKKL 95

Query: 67  VT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
            +                   +  +           +  S D  D   T    +    R 
Sbjct: 96  KSQGISRLALGREKFLDACWDWTREYGGTIVSQIKRMGCSIDLSDPKFTMSDEYAHAVRK 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++        IY+G     +        +DDE     +  +      P+
Sbjct: 156 VFVDWYHDKLIYRGKRIVNWCPVCTTAISDDEAEYRDEKGHLWYMRYPL 204


>gi|156973531|ref|YP_001444438.1| leucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166231652|sp|A7MY86|SYL_VIBHB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156525125|gb|ABU70211.1| hypothetical protein VIBHAR_01222 [Vibrio harveyi ATCC BAA-1116]
          Length = 862

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 112/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 497 FMESSWYYARYCSPQADDILAPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 556

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 557 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRITSAKDTEGRDV 615

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 616 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 669

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V+              A +   +++     + + ++ +++  +   + A+
Sbjct: 670 NRFLKRVWKLVNEHTSKGAAEAVDAAALSGDQKALRRDVHKTIAKVTDDIDRRQTFNTAI 729

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 730 AAIMELMN------------KLAKAPQESAQD-RVILDEALKAVVAMLYPITPHISYELW 776

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  AD +N  + + D++
Sbjct: 777 AALGEADIDNAAWPTFDEK 795


>gi|78044545|ref|YP_359254.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123729620|sp|Q3AF30|SYL_CARHZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77996660|gb|ABB15559.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 821

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+ + H+GH     I DV+AR+ R+ G  VL   G D  G     A
Sbjct: 30  SEKPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARYKRMRGYAVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGV-TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G      +   N  N R     L ISYD    I T    ++   + L+ +   KG 
Sbjct: 90  AIKHGNVHPADWTWDNIANMRRQLKELGISYDWRREIATCHPEYYRWTQWLFLQFYKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    +++V  G         H+ V+  E E +FF+++AY ++LL 
Sbjct: 150 AYKKKAPVNWCPGCQTVLANEQVIDGE----CERCHSRVEKKELEQWFFKITAYAERLLQ 205

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             +    +   ++   E       G
Sbjct: 206 DIKKLTGWPEKVKIMQENWIGRSEG 230



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 107/266 (40%), Gaps = 34/266 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y +           K + W P D ++ G +    H +Y   F   
Sbjct: 496 DTMDTFICSSWYYYRYTSPRDKQQPWSKEKVERWLPVDQYIGGVEHAILHLLYSRFFTKV 555

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +  + P    + + G +L  G K+SKS GNV+ P E++E+ G D  R F++   
Sbjct: 556 LYDLGLVHVDEPFT-NLLTQGMVLKDGAKMSKSKGNVVSPEEIVEKYGADTARLFILFAA 614

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +   G++              ++R   +I +  D +      F+  D+ +  +
Sbjct: 615 PPERDLEWSDQGVEGS---------FRFLNRVWRLIYQTKDRISDELREFSAKDKELNRL 665

Query: 394 CSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               ++++ E+++     + A++ ++ LV+ + +Y       +  + NP        +  
Sbjct: 666 LHATIKKVTEDIEERFNFNTAISAIMELVNGLYQY-------KEGEINP-------GLLK 711

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E + +L ILL  F P +A ++++ L 
Sbjct: 712 EALNKLVILLAPFAPHIAEELWEALG 737


>gi|302526675|ref|ZP_07279017.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302435570|gb|EFL07386.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 359

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           +HV+GK ILRFHA+YWPA LLSA   LP  +F H ++   G KISKS GN + P ++I++
Sbjct: 137 VHVLGKGILRFHAVYWPALLLSAGERLPDTIFVHDYLTVYGAKISKSAGNTVRPTDLIDQ 196

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DA+R++L+RE+A   D  + +D L  R + +LANG+GNLV R +S+  +    +   
Sbjct: 197 YGADAVRWWLLREVAPLGDTDFTEDRLIARADDELANGLGNLVHRVLSLARRTGRIVPAG 256

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P          L     +   I   + +     A   ++ ++++ +RY +  +PW L+  
Sbjct: 257 P----------LRTVHSLADRIDAALADFDFRSATGALVQVIADANRYVEQTRPWALRGD 306

Query: 440 NPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
             D+A  TV+       R+LA  L  F+P  A ++   L   +  R +  L Q+
Sbjct: 307 ELDQALGTVVSTC----RELATELSPFLPDRAARLHAQLDRGEPARLYPRLRQQ 356


>gi|300780637|ref|ZP_07090492.1| valine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533623|gb|EFK54683.1| valine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 917

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 132/432 (30%), Gaps = 45/432 (10%)

Query: 92  DDF-----IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           D F     +R          + +   +   G   +        L  + +   DE+     
Sbjct: 335 DRFDARVKVREALDAQGRIVKEVRPYVHSVGHSERTGEPIEPRLSLQWFVKVDELA-RMS 393

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G    +    +        +F             +      +PI    E  +  +     
Sbjct: 394 GDAVRSGDTEIHPESLSKRYFDWVDNMHDWTISRQLWWGHRIPIWYGPEDENGERD--IV 451

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                +    G +   D   ++  W  +     +T G+ +       KF+P  + V   D
Sbjct: 452 CCGPDEEPPAGYEQDPD---VLDTWFSSALWPFSTMGWPEKTP-ELEKFYPTTVLVTAYD 507

Query: 267 ILRFHAIYWPAFLLSAN----------------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           IL F       F   A                 +P             KG K+SKSLGN 
Sbjct: 508 ILFFWVARMMMFGTFAGTQTPDVLGSGADGRPQIPFEHIFLHGLVRDEKGRKMSKSLGNG 567

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++ + + G DALR+ L R    G D     D      NA  A      +  +    L
Sbjct: 568 IDPMDWVRDYGADALRFALARGANPGIDLPIGDD------NAASARNFATKLYNATKFAL 621

Query: 371 KDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            +   + P P     T++D  IL     V   + E + +    +A  ++     +   D 
Sbjct: 622 MNGAALGPLPPREQLTDADRWILDRLETVRSHVDELLDDYQFSKANEELYHFAWDELCDW 681

Query: 427 YFDAQK---PW---ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           Y +  K   P       + +  R      V   V+  +  LL   +P +   ++  L   
Sbjct: 682 YLEIAKTQIPRDTDSASEADRARGRNTQIVLGRVLDVVLRLLHPTMPFVTEVLWKAL-TE 740

Query: 481 DENRCFQSLDQR 492
           +E+ C       
Sbjct: 741 EESLCLAQWPTA 752



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D L+R  R+ G +VL+  G D  G      
Sbjct: 51  SDKPAYSIVLPPPNVTGQLHMGHALDHTLMDSLSRRKRMQGFEVLWLPGMDHAGIATQTK 110

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T+           F+ +                R + D +D S + F  T + 
Sbjct: 111 VEAMLKETEGKDRYDYGRDEFISRVWEWKEKYGGTITSQMRAIGDSVDWSRERF--TLDD 168

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +     ++K++ D G IY+      +S   E   +D EV  
Sbjct: 169 GLNRAVVTIFKQLYDAGMIYRDYRLVNWSPVLETAVSDIEVVY 211


>gi|91228820|ref|ZP_01262727.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187625|gb|EAS73950.1| leucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 857

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 111/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRITSAKDTEGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V               A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHTAKGAAEAVDTAALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ + ++L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAIVVMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L   D +N  + + D++
Sbjct: 772 AALGETDIDNSAWPTFDEK 790


>gi|221194428|ref|ZP_03567485.1| valyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185332|gb|EEE17722.1| valyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 895

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 138/391 (35%), Gaps = 51/391 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             +E    D          +       ++    E +F  +   ++              P
Sbjct: 326 WFEEHGLLDHIEDLEHSVMHCYRCGTTLEPWLSEQWFVAVDKLKEPAAQAVRKGDVTFHP 385

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY------------------- 226
             R  +        L+D ++SR+   WG +I     DD  +                   
Sbjct: 386 E-RWTQTYLTWMDNLRDWNISRQ-LWWGHRIPVFYCDDCGWQDALMEDTDVCPKCGGHHV 443

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +      T G+ ++P+  +    P  + V  +DI+      W A ++ 
Sbjct: 444 RQDEDVLDTWFSSQLWTFATQGWPEHPEQLEGHH-PTKVLVTARDIIA----LWVARMIM 498

Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           ++L   K++  H   ++       G ++SKS GN ++P+++I + G DA+RY L+  I  
Sbjct: 499 SSLYFTKEIPFHDVFIYATILAKDGSRMSKSKGNGVNPMDLIAKYGADAMRYNLLTLITN 558

Query: 336 GKDGFYD------KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDE 388
            +D  +D         L +    D A      +  +   +  + DG  P  P A T  D 
Sbjct: 559 NQDVKFDAVLDKKTKELLESPRTDQARSFVTKIWNASRFVQMNLDGYTPGEPKAKTPEDA 618

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            + S  +RV  E  E +++         + +       D Y +  K   L     +R   
Sbjct: 619 WMFSRLARVTAETTEQLESYGFGDYARNIQTFFWNDVCDWYIELCKSRLLNGDTEERLQ- 677

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V    V V+     LL   +P +   ++D L
Sbjct: 678 VQRNLVFVLDVSMRLLHPVMPFVTESVWDAL 708



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA +  I D   R+ R+ G    +  GTD  G            
Sbjct: 37  TVVIPPPNVTGILHMGHAMDDTIQDTYIRYSRMRGYSTRWILGTDHAGIATQTKVDKKLK 96

Query: 68  T----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
           +                   +  +      +    +   I +DD   T    +    R +
Sbjct: 97  SEGVSRLEIGREKFIEACWDWTREYGGTIVEQIKRMGCSIDFDDEKFTMSPEYTRAVRKV 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +        IY+G     +    E   +DDE     +  +      P+
Sbjct: 157 FVDWYHHDLIYRGKRIVNWCPHCETSISDDEAEYADEKGHLWYLRYPL 204


>gi|269965469|ref|ZP_06179588.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829948|gb|EEZ84178.1| leucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 857

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 111/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRITSAKDTEGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V               A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHTAKGAAEAVDTSALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ + ++L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAIVVMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L   D +N  + + D++
Sbjct: 772 AALGETDIDNAAWPTFDEK 790


>gi|328543659|ref|YP_004303768.1| Valyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
 gi|326413403|gb|ADZ70466.1| Valyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 945

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 119/347 (34%), Gaps = 20/347 (5%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK----- 205
           N +    +WME    +                 P+  L +E+                  
Sbjct: 425 NWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGHLFVEKDEATALAAAQAHYGTPVR 484

Query: 206 --DLSLSRKTFDWGI----KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
              +  +   ++ G      +    + ++  W  +     +T G+ D      A+++P  
Sbjct: 485 VVAMEQALAAWEKGTATTETLLYRDEDVLDTWFSSALWPFSTLGWPDKTP-ELARYFPTS 543

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           + + G DI+ F    +   +       P             KG+K+SKS GNVIDP+ ++
Sbjct: 544 VLITGFDIIFFWVARMMMMSLHFMKTEPFETVYIHALVRDEKGQKMSKSKGNVIDPLSLV 603

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           EE G DALR+ L    A G+D       +      + A  + N  +R   M         
Sbjct: 604 EEFGADALRFTLTAMAAQGRDIKLATSRV--GGYRNFATKLWN-AARFAEMNGCRRVAGF 660

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
              G     +  I +   R  +E+   +++   + A   V   V     D + +  KP  
Sbjct: 661 DPNGVTHTLNRWIATETGRCAEEVTAALESYRFNDAANVVYRFVWNTYCDWFLELAKP-V 719

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              ++    +         + ++  +L  F+P L  +++  L    E
Sbjct: 720 FNGSDEAVKAETRATAAWALDEILKILHPFMPFLTEELWARLGDGAE 766



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 23/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA    + DVL RF R+ G DVL+  G D  G       + 
Sbjct: 36  PSYTIVIPPPNVTGSLHMGHALNNTLQDVLVRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
             +  +           FV +                + +    D S + F  T ++   
Sbjct: 96  QLMERQEPGRRDMGRDAFVQRVWEWKAESGGMILNQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++  +   G IYK      +  +     +D EV +            P++
Sbjct: 154 AAVLEVFVSLYRDGLIYKDKRLVNWDPKLLTAISDLEVQQVELKGNLWHFRYPLE 208


>gi|28897501|ref|NP_797106.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839855|ref|ZP_01992522.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|31077000|sp|Q87RQ0|SYL_VIBPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28805713|dbj|BAC58990.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746627|gb|EDM57615.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 857

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 113/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFIL------------------------------------HKGE-- 301
           ++++ P  K++   G +L                                    ++G   
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRIISAKDNEGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V    +          A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHAEKGAAEAVDTAALSGEQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVTMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  +D +N  + + D++
Sbjct: 772 TALGESDIDNAAWPTFDEK 790


>gi|262394986|ref|YP_003286840.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338580|gb|ACY52375.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 857

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 111/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRITSAKDTEGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V               A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHTAKGAAEAVDTAALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ + ++L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAIVVMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L   D +N  + + D++
Sbjct: 772 AALGETDIDNAAWPTFDEK 790


>gi|220905335|ref|YP_002480647.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869634|gb|ACL49969.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 888

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/376 (15%), Positives = 126/376 (33%), Gaps = 14/376 (3%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G  Y+        +  + +    ++   A            +       + +   + 
Sbjct: 341 HAVGHCYRCHTVVEPHVSTQWFVAATKMAPAARDAVPGMTRILPE------SWLKTYYHW 394

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
              +  +    +                  +            G       + ++  W  
Sbjct: 395 LDNIRDWCISRQIWWGHRIPAWTCEACSQLIVAEEAPDVCPHCGSTALKQDEDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+  +      +++P  + V G DIL F    +           P      
Sbjct: 455 SALWPFSTMGWPADTR-EMHRWYPTSVLVTGFDILFFWVARMMMMGIHFMGKPPFADVYL 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G K+SKS GNVI+P+E+I++ G DALR+ L    A G+D    +D ++    
Sbjct: 514 HALVRDASGRKMSKSTGNVINPLEMIDKYGCDALRFTLTAFAAMGRDIRLSEDRIEG--Y 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
               N + N    ++  + ++    +          + +L     V Q++ + +++   +
Sbjct: 572 RHFVNKLWNAARFTLMNLPEEAPARVDLAAIQGLHHQWLLHRLEMVKQDMDQALEDYRFN 631

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A       +     D Y +  KP +++  +  R +   YV    +R++ +LL   +P +
Sbjct: 632 DAAQLGYKFLWNEFCDWYLELVKP-DMQSEDEQRKAAAQYVLWLALREILLLLHPVMPFV 690

Query: 470 ANKIFDILFVADENRC 485
             +I+  L V    + 
Sbjct: 691 TAEIWAALPVPAGEKS 706



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA  + + DVL R  R  G +VL+  GTD  G       + 
Sbjct: 37  EPFSIVIPPPNVTGALHIGHALNLTLIDVLCRHARQKGKNVLWVPGTDHAGIATQNVVER 96

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A                        + +  +     R M   +D S   F  T ++    
Sbjct: 97  ALAAEGKGRKDLGREAFIDRVWEWREDYGHRILDQIRAMGASVDWSRLRF--TMDEGLSA 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ + G IYKG Y   +  R      DDEV  
Sbjct: 155 AVRKVFVQLYNDGLIYKGDYIINWCSRCHTALADDEVEH 193


>gi|239904844|ref|YP_002951582.1| valyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794707|dbj|BAH73696.1| valyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 888

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 136/392 (34%), Gaps = 48/392 (12%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    DD      +          ++    + +F +            E     ILP +
Sbjct: 330 KELTLLDDIRDYEHNVGECYRCRTVIEPFVSKQWFVKTGPLAKVARKAVEDGRTIILPDQ 389

Query: 192 RRNEVISFVKSGLKDLSLSRKTFD------W----------------------GIKIPDD 223
                  ++   ++D  +SR+ +       W                      G ++  D
Sbjct: 390 WTKTYYDWLD-NIRDWCVSRQIWWGHRIPAWTCDSCGELIVSRETPTACPACGGSRLTQD 448

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
           P  ++  W  +     TT G+ D      A F+P  +     DIL F    W A ++   
Sbjct: 449 PD-VLDTWFSSALWPFTTMGWPDQTK-ELATFYPTSVLSTAFDILFF----WVARMMMMG 502

Query: 284 LPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           L    +V      +H      +G K+SKSLGN IDP+ ++E  G DALR+ L    A G+
Sbjct: 503 LHFMDEVPFRHVYIHALVRDAEGRKMSKSLGNGIDPLAMMERYGTDALRFTLAAFAAMGR 562

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSR 396
           D    ++ ++        N + N    ++  +     +  +            ILS   R
Sbjct: 563 DIKLAEERIEG--YRHFINKLWNAARFALMHVADGAPEMELSQAAKAGLCHAMILSRLER 620

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           +   +   ++    + A  ++         D Y +  K  +L   +  +      V + V
Sbjct: 621 LKGTVSRAIEGYQFNEAAQELYGFFWREFCDWYLEMAKV-DLGGEDEFKKGAAKRVLLTV 679

Query: 455 IRQLAILLQAFVPKLANKIFDIL-FVADENRC 485
           + +   L+   VP +  +I+  L  +A+ N  
Sbjct: 680 LSETLTLMHPIVPFVTQEIWSKLPGMAEPNLA 711



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 22/178 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA  + I D+L R+HR  G  VL+  GTD  G       + 
Sbjct: 38  EPYSIVIPPPNVTGALHMGHALNITIQDILCRYHRQLGRKVLWVPGTDHAGIATQNVVER 97

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           +                        + +  +       +   +D S + F  T ++    
Sbjct: 98  SLAAAGTSREELGREAFIERVWKWREEYGGKILNQISRLGASVDWSRERF--TMDEGLSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R ++ ++ + G IY+G Y   +  R      D EV              PV+  ++
Sbjct: 156 AVREVFVRLYEDGLIYQGDYIINWCPRCHTALADLEVEYAPHIGKLYHIRYPVEGTDQ 213


>gi|13027666|gb|AAG15586.1| leucyl-tRNA synthetase-like protein [Pasteurella multocida]
          Length = 700

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 9/234 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+ + H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 30  TNKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMNGKNVLQPMGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++          +D  + T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMKNQLKILGFGFDWDREVTTCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +  P +   ++           G      L+ S          PD    + YV
Sbjct: 206 LDHLPLWPDQVKTMQRNWIGRSEGVEITFQLANSEDNLTVYTTRPDTFFGVSYV 259



 Score = 40.5 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++          + NL
Sbjct: 619 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGA--KRFLGRLWNL 676

Query: 362 V 362
           V
Sbjct: 677 V 677


>gi|119503290|ref|ZP_01625374.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119460936|gb|EAW42027.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 920

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/396 (17%), Positives = 137/396 (34%), Gaps = 85/396 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      ++          ++  E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 348 VEPWLTPQWYVDAKKLAAPAIAAVEDETIKFVPKQWENTYYAWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 406 GHRIPAWYDDGGNVFVGHDEAAVRAAHKIDDNITLTQDDDVLDTWFSSALWTFSTLGWPN 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 +KF PA + V G DI+ F    +   +      +P             +G+K+S
Sbjct: 466 KTP-EMSKFHPASVLVTGFDIIFFWVARMIMMSLHFCDEVPFHTVYVHGLVRDGEGQKMS 524

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNVIDPI++I                                     +  G DALR+
Sbjct: 525 KSKGNVIDPIDLIDGIDLESLVAKRTGGMMQPQMAARIAKQTRKHFPEGIQGYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTE 385
                 + G+D  +D   ++   N        N +  +   +L + +G    P     + 
Sbjct: 585 TFYSLASTGRDIKFDMHRMEGYRN------FCNKLWNAARYVLGNCEGLATSPAHAEPSL 638

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP--WELKKTNP 441
           +D  ILS  +   ++  + ++      A   +   V     D Y +  KP  W+ ++ NP
Sbjct: 639 ADRWILSRLASAAKDCEQAIEQYRFDLASQALYDFVWNEFCDWYLELSKPILWD-EEANP 697

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D+A    +  V V+  +  LL   +P +  +I+  +
Sbjct: 698 DQAMVTRHTLVRVLENILRLLHPMMPFITEEIWQSI 733



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 24/168 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT- 68
            I  PN     H+GH ++  I D L R+ R+ G D L+  GTD  G       +      
Sbjct: 36  PIPPPNVTGSLHMGHGFQQAIMDALIRYQRMKGADTLWQVGTDHAGIATQMLVERQLEAE 95

Query: 69  -------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         KV+  +       +R  R +    D S + F  T ++   +  + +
Sbjct: 96  GIKREDIGRDAFIEKVWEWKEQSGGTITRQLRRLGASADWSRERF--TMDEGLSEAVQQV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ D+G IY+G     +  +     +D EV    +  +      P+
Sbjct: 154 FIQLYDQGLIYRGQRLVNWDPKLHTAISDLEVVSEEEQGFMWHLRYPL 201


>gi|269102010|ref|ZP_06154707.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161908|gb|EEZ40404.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 858

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DQLDGWPDMVKTMQRNWIGRSEG 229



 Score = 90.2 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 110/318 (34%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFFYTNEKGGKEWVAPTEVTVERDGKGRITKAVNTEGREVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++E+ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V  +  D         A T   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHELTADGAIEALDVAALTGDQKALRRDVHKTIAKVSDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K + + A     +  E ++ +  +L    P +   +++
Sbjct: 727 AIMELMN------------KLTKASLESAQD-RALMDEALKAIVRMLYPITPHVCFTMWE 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  +D ++  +   D++
Sbjct: 774 ALGESDIDHAVWPQADEK 791


>gi|30262197|ref|NP_844574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527474|ref|YP_018823.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185038|ref|YP_028290.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872242|ref|ZP_02216880.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641057|ref|ZP_02399313.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708428|ref|ZP_02898871.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650879|ref|ZP_02933776.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567931|ref|ZP_03020842.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227815003|ref|YP_002815012.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229603474|ref|YP_002866548.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254721058|ref|ZP_05182849.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737212|ref|ZP_05194916.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751527|ref|ZP_05203564.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759042|ref|ZP_05211069.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81582455|sp|Q81R75|SYI2_BACAN RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|30256828|gb|AAP26060.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502622|gb|AAT31298.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178965|gb|AAT54341.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712035|gb|EDR17574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510955|gb|EDR86345.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126667|gb|EDS95551.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172083340|gb|EDT68401.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560986|gb|EDV14960.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004720|gb|ACP14463.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229267882|gb|ACQ49519.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 1033

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECERC---DHQFAPKSIADLRKHSMKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SALWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  +   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDVHLNL 766



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|262274725|ref|ZP_06052536.1| leucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221288|gb|EEY72602.1| leucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 857

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  SKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++          +D    T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWDREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLDGWPEQVKTMQRNWIGRSEG 229



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 78/192 (40%), Gaps = 21/192 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++++ G D +R F++          + + G++       AN     
Sbjct: 617 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKR 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V + V       D       A     +++     + + ++ +++  +   + A+A V+ L
Sbjct: 671 VWKLVYEHTSKGDVAALDTTALNADQKTLRREVHKTIAKVSDDIGRRQTFNTAIAAVMEL 730

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ + +              P    T   +  E ++ + ++L    P ++ +++  L   
Sbjct: 731 MNRLTK-------------APQDTETDRAILDEALKAIVVMLYPITPHISTELWAALGQT 777

Query: 481 D-ENRCFQSLDQ 491
           D +N  +   D+
Sbjct: 778 DIDNTEWPVADK 789


>gi|167632914|ref|ZP_02391240.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170686512|ref|ZP_02877733.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254684765|ref|ZP_05148625.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254743603|ref|ZP_05201288.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167531726|gb|EDR94391.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170669588|gb|EDT20330.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 1033

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECERC---DHQFAPKSIADLRKHSMKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SALWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  +   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDVHLNL 766



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|197117146|ref|YP_002137573.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690875|sp|B5EE39|SYL_GEOBB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197086506|gb|ACH37777.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 824

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  SRKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     L +SY  D  + T +  ++   + ++ ++  KG  Y
Sbjct: 91  IQHKSHPAKWTYENIAYMRGQLKTLGLSYDWDRELATCDLDYYKWEQRIFLEMYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +  + E    +++V  G          +PVQ  E E + FR++ Y  +LL   
Sbjct: 151 KKSSAVNWCPKCETVLANEQVEDG----CCWRCDSPVQQKELEQWSFRITNYAQELLDDT 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
                +   +           +G
Sbjct: 207 YKLTGWPERVLTMQRNWIGRSTG 229



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 28/268 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y +        D  K + W P D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFVQSSWYFLRYCSPKFSAGPLDREKVEAWMPVDQYIGGIEHAVLHLLYARFFTKV 553

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                  + + P    + + G ++  G K+SKS GNV+DP  +IE  G D  R F +   
Sbjct: 554 LRDLGYCNVDEPF-SNLLTQGMVIKDGAKMSKSKGNVVDPNALIERYGADTARLFSLFAA 612

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +   G+         N +  LV   + +I    D     PG      + +   
Sbjct: 613 PPEKDLDWSDQGVDGSYR--FLNRVWRLVYDVLPVIG---DAGAVNPGELGAEAKKLRRA 667

Query: 394 CSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + ++++ E+++     + A+A V+ LV+       A       K  P+  + V     
Sbjct: 668 VHKTIKKVSEDVEERFHFNTAIAAVMELVNA----IQAFS----AKDAPENVAVVR---- 715

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVA 480
           E +  +  LL  FVP  A +++  L  A
Sbjct: 716 EAVESVVRLLAPFVPNFAEELWFQLGHA 743


>gi|294142171|ref|YP_003558149.1| leucyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328640|dbj|BAJ03371.1| leucyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 864

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 31  ENKEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQRLQGKNVLQPIGWDSFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 91  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 151 YKKTSSVNWCPNDETVLANEQVIDG----CCWRCDTVVEQKEIPQWFIKITEYADELLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +   E+   ++           G+     +  S ++FD     PD    + YV I A 
Sbjct: 207 LDQLDEWPEQVKTMQRNWIGRSEGIEMTFKVVDSEESFDIYTTRPDTVMGVTYVAIAAG 265



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 106/322 (32%), Gaps = 84/322 (26%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y                KA +W P D ++ G +    H +Y+  F        L
Sbjct: 497 FMESSWYYARYCSPHADQMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDIGL 556

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
             +    K++ + G +L                            KG             
Sbjct: 557 VDSDEPAKRLLTQGMVLADAFYYNNERGARVWVAPSDVTVQETDDKGRILKAIDKDGNEL 616

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + +  ++        
Sbjct: 617 VYTGMSKMSKSKNNGIDPQEMVDKFGADTVRLFMMFAAPPELTLEWQESSVE-------- 668

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQL-IH 411
            G    + R   +                  D   + +     + + ++ ++++ +   +
Sbjct: 669 -GAHRFIKRLWKLAHDHIAKGPTAELDIKSLDAKQKELRRELHKTIVKVTDDIERRQMFN 727

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++ +      + P   +++  DRA     +  E +  +  LL   +P  + 
Sbjct: 728 TAIASIMELMNRL-----LKAP---QESEQDRA-----LLNEALSAVVRLLYPIIPHTSF 774

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            +++ L   +  E+  +   D+
Sbjct: 775 SLWNELGNPEAIEDVLWPKADE 796


>gi|257784424|ref|YP_003179641.1| valyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472931|gb|ACV51050.1| valyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 895

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 137/391 (35%), Gaps = 51/391 (13%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             +E    D          +       ++    E +F  +   ++      +       P
Sbjct: 326 WFEEHGLLDHIEDLDHSVMHCYRCGTTLEPWLSEQWFVAVDKLKEPAAQVVKDGQVAFHP 385

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
             R  +        L+D ++SR+   WG +IP                            
Sbjct: 386 K-RWTQTYLTWMENLRDWNISRQ-LWWGHRIPVFYCDDCGWQDALMEDTDVCPKCGGHHV 443

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ ++PD  +    P  + V  +DI+      W A ++ 
Sbjct: 444 HQDEDVLDTWFSSQLWTFATQGWPNHPDQLEGHH-PTQVLVTARDIIA----LWVARMIM 498

Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           ++L   K++  H   ++       G ++SKS GN +DP+++I + G DA+RY L+  I  
Sbjct: 499 SSLYFTKEIPFHDVYIYATILAKDGSRMSKSKGNGVDPMDLIAKYGADAMRYNLLTLITN 558

Query: 336 GKDGFYD------KDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDE 388
            +D  +D         L +    D A      +  +   +  + D      P A T  D 
Sbjct: 559 NQDVKFDAVLDKKTRELVESPRTDQARSFVTKIWNASRFVQMNLDGYTAGMPKAETPEDA 618

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            + S  ++V+ E  E ++          + S       D Y +  K   L  T  +R   
Sbjct: 619 WMFSRLAKVVAETTEQLETYGFGEYARNIQSFFWNDVCDWYIELCKGRLLDGTPEERLQ- 677

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V    V V+     LL   +P +   ++D L
Sbjct: 678 VQRNLVFVLDVSMRLLHPAMPFVTESVWDAL 708



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA +  I D   R+ R+ G    +  GTD  G            
Sbjct: 37  TVVIPPPNVTGILHMGHAMDDTIQDTYIRYSRMRGYSTRWILGTDHAGIATQTKVDKKLK 96

Query: 68  T----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
           +                   +  +           +   I ++D   T    +    R +
Sbjct: 97  SEGISRLEIGREKFVDACWDWTREYGGTIVSQIKRMGCSIDFNDEKFTMSPEYTQAVRKV 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +        IY+G     +    E   +DDE     +  +      P+
Sbjct: 157 FVDWYHDQLIYRGKRIVNWCPHCETSISDDEAEYADEKGHLWYLRYPL 204


>gi|37528304|ref|NP_931649.1| valyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81418134|sp|Q7MZ25|SYV_PHOLL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|36787742|emb|CAE16855.1| valyl-tRNA synthetase (valine--tRNA ligase) (VALRS) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 965

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 138/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGDIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDTNGNVYVGRSEEEVRRENNLGTDISLNQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 506 QTDALKTFH-PTDVLVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDE 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPAGIETHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLQG--YRNFCNKLWN-ASRFVLMNTEGQDCGQHGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            A + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 682 MALSLADRWILAEFNQTVKAYREALDTYRFDMAANILYEFTWNQFCDWYLELSKP-AINK 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  +EV+  L  L    +P +   I+  + +
Sbjct: 741 GSEAEVRGARHTLIEVLEGLLRLAHPIIPFITETIWQRVKI 781



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I           H+GHA++  I D + R+ R+ G + L+ +GTD  G      
Sbjct: 44  TSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQSGTDHAGIATQMV 103

Query: 62  AQ----------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+D+  +             R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITNQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEAFVRLYQENLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 218


>gi|260893645|ref|YP_003239742.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865786|gb|ACX52892.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 824

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++ K Y      YP+ + H+GH     I DV+ARF R+ G  VL   G D  G     A
Sbjct: 30  EDKPKYYCLEMFPYPSGKLHMGHVRNYAIGDVVARFKRMQGYSVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  QN    R+    L  SYD    I T    ++   + L+ +   +G  
Sbjct: 90  AIKHGIHPHDWTWQNISFMREQLKQLGFSYDWHREIATCHPDYYRWTQWLFLQFFHRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V     G        PV   E E +F R++AY ++LL  
Sbjct: 150 YRKKAPVNWCPSCATVLANEQVV----GGVCERCKTPVVPRELEQWFLRITAYAERLLQD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLTGWPEKVKVMQRNWIGKSEG 229



 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 112/289 (38%), Gaps = 28/289 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y +        D +K  +W P D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFICSSWYYFRYTSPKEDKAPWDKTKVDYWLPVDQYIGGVEHAILHLLYSRFFTKF 553

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +S + P    + + G +L  G K+SKS GN++ P E+IE  G D  R F++   
Sbjct: 554 LYDIGLVSCDEPFT-NLLTQGMVLKDGAKMSKSKGNIVSPEEIIEHYGADTTRLFILFAA 612

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +  +G++            N V R V  ++    G      + +  +  +  +
Sbjct: 613 PPERDLEWSDEGVEG------CARFLNRVWRLVRSLIPVVQGAGEPAESLSPPNRELRRL 666

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             R ++ +  +++   ++ A++ ++   + + RY +  +P        D          E
Sbjct: 667 THRTIERVTRDIEEFGLNTAVSAIMEFTNGLARYCEEVRP-----EERD-----PGTLRE 716

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLH 500
            +  L +LL  F P +A ++++ L   +    + + + D +L     + 
Sbjct: 717 AVETLILLLAPFAPYMAEELWEQLGKKESVHRQSWPTYDPKLTVADQVE 765


>gi|330836390|ref|YP_004411031.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748293|gb|AEC01649.1| valyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 879

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 136/367 (37%), Gaps = 39/367 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              D  +    H  ++    + +F ++     K L   + +     P    N    ++++
Sbjct: 336 HVHDVGHCYRCHTVIEPYLSDQWFVKMKGLAKKALGALKRNDIVFYPRRWENTYCHWLET 395

Query: 203 GLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWIDA 234
            ++D  +SR+   WG  I +                                ++  W  +
Sbjct: 396 -IRDWCISRQ-LWWGHRIPVWYCKDCGKVIVSREDPSCCPKCHKTNLLQDNDVLDTWFSS 453

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D        F+P    V   DI+ F    +   +      +P    V +
Sbjct: 454 WLWPFSTLGWPDKTA-DLDNFFPTSTLVSAYDIIFFWISRMIMSSKEFLGKVPFRDIVIT 512

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 KG K++KSLGN IDP E+I++ G DA+++ L      G+D   +K+     + +
Sbjct: 513 GLVRDIKGRKMAKSLGNGIDPNEIIDQYGADAMKFTLCYVTTLGQDLLIEKNLF--NLGS 570

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              N I N  +R + + L+  +        ++  D  I    +   Q+I  +++N     
Sbjct: 571 RFTNKIWN-AARFLLLNLEGRNIRTIDESEYSIMDRWIYGRFNYACQKISYSIENYKFSD 629

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A   + S       D Y ++ K   L  T  ++   +  + ++++     L+  F+  + 
Sbjct: 630 AAQCIYSFFWNDFCDWYIESSKQKLLHGTKEEKDKAI-SILMDMLEASMRLMHPFLSFIT 688

Query: 471 NKIFDIL 477
            +I+  L
Sbjct: 689 EEIYQKL 695



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 54/159 (33%), Gaps = 18/159 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +E   +           H+GHA    + DV+ R+HR+ G+ VL+  GTD  G       +
Sbjct: 32  KETFSMVMPPPNVTGILHMGHALNNSLQDVIVRYHRMKGMAVLWLPGTDHAGIATQNVVE 91

Query: 64  NAGVTT------------KVFVDQNSRNF----RDMADVLDISYDDFIR--TTEKRHHDT 105
                                      N     +   + +  S D      T ++     
Sbjct: 92  RQLNNEGLGRHDIGREKFLERTWLVKENHHNIIKSQLEKMGCSCDWEHERFTMDEGASRA 151

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            R  +  + +KG IYKG Y   Y  +     +DDEV   
Sbjct: 152 VREAFVTLYEKGLIYKGKYLVNYCYKCGTALSDDEVEYD 190


>gi|65319480|ref|ZP_00392439.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 1033

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 147/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDTVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K ++    H     P     E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECERC---DHQFAPKSIADLRKHSMKETP-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGSTMNRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SALWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  +   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDVHLNL 766



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|52143260|ref|YP_083569.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81688177|sp|Q63BZ8|SYI2_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 2; AltName: Full=IleRS 2;
           AltName: Full=Isoleucine--tRNA ligase
 gi|51976729|gb|AAU18279.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 1033

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 145/389 (37%), Gaps = 32/389 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IRTT          +        D            R   +    E     +        
Sbjct: 404 IRTT---------AIKDTFLQNNDSVTWYPDHMKHGRFGKFL---ENMVDWNISRNRYWG 451

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
            P+   E E        +  K +     H           E +   K  + ++ +  +  
Sbjct: 452 TPLNVWECESC---DHQFAPKSIDDLRKHSTKETQ-----EDLELHKPYVDEVQVCCEK- 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +   P+ ++ VW D+ +       Y         + +PAD+   G D     F++
Sbjct: 503 -CGGTMTRTPE-VIDVWFDSGSMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYS 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L +  +P  + +     +  +G+K+SKS GN +DP++++ + G DALR+ L+ +
Sbjct: 561 LLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNALDPVDLVNQFGADALRWALLVD 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESIL 391
            A      + +  + +   +   + + N+ S   +   L +Y+         T+ DE +L
Sbjct: 621 SAPWNAKRFSERTVLEAK-SKFVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVL 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVL 448
           S      +++R  + +     A  ++ +LV EV + Y      + WE    N ++A+   
Sbjct: 680 SRLHSTTKKVRIALDDYQFTNAAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-Y 737

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +V+  ++ L+  F P +A  I   L
Sbjct: 738 ETLHDVLVTISKLIAPFTPFVAEDIHLNL 766



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  PH+GHA    I DV+AR+  + G  VL   G D HG  +    +         
Sbjct: 46  PPTANGLPHVGHALGRTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKH 105

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V    + +R+  + +   +  DD   T E  + ++   +   I
Sbjct: 106 EIEEYGIEPFIKKCKESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTI 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y    +   +  EV +G  
Sbjct: 166 HEKGLLYKGHRVSPYCPSCQTSLSSHEVAQGYK 198


>gi|126740704|ref|ZP_01756390.1| valyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126718219|gb|EBA14935.1| valyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 1023

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 12/263 (4%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           + +  DP  ++  W  +    + T G+ ++      K++P    V G+DIL F    +  
Sbjct: 583 VPVWRDPD-VLDTWFSSGLWPIGTLGWPEDTA-EMQKYFPTSTLVTGQDILFFWVARMMM 640

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   +P             KG+K+SKS GNV+DP+E+I+E G DALR+      A 
Sbjct: 641 MQLAVVDQIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEFGADALRFSSAAMAAL 700

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVC 394
           G     D + LK     +    + N V+ +    + D D      P A    ++ I+   
Sbjct: 701 GGVLKLDMERLKG--YRNFGTKLWNAVNFAHFNKVYDADVPAYTCPDAQAAVNQWIIGET 758

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA-STVLYVT 451
           ++V  E+   ++    + A   + +       D Y +  KP  L  ++ +   +      
Sbjct: 759 AKVRVEVDAALEAYRFNDAANALYAFTWGKVCDWYIELSKP--LFNSDDEAVIAETRQTL 816

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
             V+ Q  ILL   +P +  +++
Sbjct: 817 GWVLDQCMILLHPIMPFITEELW 839



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 59/183 (32%), Gaps = 36/183 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G       +    
Sbjct: 40  CIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMVVERELA 99

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT------------ 98
                                + +Q+     +    L  S D F RT             
Sbjct: 100 KSQQPSRAELGREKFLEKVWEWKEQSGGTIVEQLKRLGASCD-FSRTAFTMAGAQGDTRT 158

Query: 99  ----EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++ ++ +KG IY+G     +    E   +D EV       +     
Sbjct: 159 GHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFK 218

Query: 155 NPV 157
            P+
Sbjct: 219 YPL 221


>gi|56461050|ref|YP_156331.1| valyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821717|sp|Q5QY15|SYV_IDILO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56180060|gb|AAV82782.1| Valyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 949

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 82/437 (18%), Positives = 150/437 (34%), Gaps = 84/437 (19%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G           +  DE    +          Y +    P++    + ++ R+     + 
Sbjct: 334 GKERFEARKQLVAEFDELGLLEKIEKHTNKIPYGDRGGVPIEPHLTDQWYVRVEPMAKQA 393

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV---- 230
            +  E      +P +  N   S+++  ++D  +SR+   WG  I    D Q  +YV    
Sbjct: 394 TAAVEDGRIEFVPKQYENMYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDEQGNVYVGRTE 451

Query: 231 -----------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                                  W  +     +T G+  N +  K    P D+ V G DI
Sbjct: 452 EEVREKHNLGDTPLQQDEDVLDTWFSSALWTFSTLGWPKNTEDLKTFH-PTDVLVTGFDI 510

Query: 268 LRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + F         +           +P  K   +      +G+K+SKS GNV+DP+++I+ 
Sbjct: 511 IFFWVARMIMMTMHFMKDEEGQPQVPFKKVYVTGLIRDEEGQKMSKSKGNVLDPLDMIDG 570

Query: 320 V-------------------------------------GVDALRYFLVREIACGKDGFYD 342
           +                                     G DALR+ L    + G+D  +D
Sbjct: 571 ISADELVAKRTANLMQPKMREKIEKRTRKEFPEGITAHGTDALRFTLTALASTGRDINWD 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEI 401
              L+     +  N + N  SR V M  +++D  +       + +DE I++  +  +++ 
Sbjct: 631 MKRLEG--YRNFCNKLWN-ASRYVLMSTEEHDCGLENDDMTLSLADEWIIARFNSTVKDF 687

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           R+ +      +A A           D Y +  KP     T   +  T  +  V V+ QL 
Sbjct: 688 RQALDTYRFDQAAAIAYEFTWNQFCDWYLELTKPVLQNGTESQQRGT-RHTLVNVLEQLL 746

Query: 460 ILLQAFVPKLANKIFDI 476
            LL   +P +   I+  
Sbjct: 747 RLLHPVMPYITETIWQR 763



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 24/174 (13%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA---- 65
            I  PN     H+GHA++  I D L R+ R+DGL+ L+  G+D  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQHTIMDTLTRYQRMDGLNTLWQVGSDHAGIATQMVVERQLAAQ 95

Query: 66  ----------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         K++  +       ++  R + D +D   + F  T ++   D  R +
Sbjct: 96  GQTRQELGRDAFIDKIWEWKEQSGGTITQQMRRLGDSVDWDRERF--TMDEGLSDAVREV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           + K+ +   IY+G     +    +   +D EV       Y      P+   E+ 
Sbjct: 154 FVKLHEDNLIYRGKRLVNWDPALQTAISDLEVENKEQQGYIWYLRYPLADGEKT 207


>gi|87119373|ref|ZP_01075271.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165764|gb|EAQ67031.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 818

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  SSKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +D    L   Y  D  I T    ++   +  + ++ +KG  
Sbjct: 90  AIKHKTAPAKWTKENIAYMKDQLKQLGFGYDWDREIATCTPEYYRWEQWFFTQLVEKGMA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 150 YKKTSAVNWCPNDKTVLANEQVEDG----GCWRCGTTVERKEIPQWFIRITDYAQELLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +   E+   ++           GL
Sbjct: 206 LDQLDEWPEKVKAMQRNWIGRSEGL 230



 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 106/275 (38%), Gaps = 35/275 (12%)

Query: 232 IDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y       +        +A +W P D ++ G +    H +Y   F         
Sbjct: 496 FMESSWYYARYCSPESDEMMLTEEANYWLPVDQYIGGVEHAILHLLYARFFHKLLRDAGL 555

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +++N P  K++ + G +   G K+SKS GN +DP E+IE+ G D +R F++      +  
Sbjct: 556 VTSNEPF-KRLLTQGMVNKDGTKMSKSKGNTVDPQEMIEKYGADTVRLFIMFTAPPEQSL 614

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            ++  G+     +     +  L  R                   T   +++       + 
Sbjct: 615 EWNDAGVDGS--SRFLRRLWALAYR----HNNAGTVGKLDTSKLTSDQKALRRKTHETIA 668

Query: 400 EIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++ ++++ +   + A+A ++ L +E+ +Y            +       L V  E +   
Sbjct: 669 KVTDDIERRQTFNTAIAALMELCNEISKY-----------EDKSELG--LAVEQEALEAA 715

Query: 459 AILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
            + L   VP ++++++  L       +  + ++D+
Sbjct: 716 TLCLSPIVPHISHELWGALGHDTNVVDAPWPTVDE 750


>gi|307294118|ref|ZP_07573962.1| valyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880269|gb|EFN11486.1| valyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 899

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/370 (17%), Positives = 127/370 (34%), Gaps = 45/370 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +         I+P        ++++  ++   +SR+   W
Sbjct: 385 IEPWLTDQWYVDAEKLAVAPMQAVRDGRIEIVPKTWEKTFFNWME-NIQPWCVSRQ-LWW 442

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +      T G+ +  +
Sbjct: 443 GHQIPAWYDEDGNPYVAESEEEAQALAGNKKLTRDPDVLDTWFSSALWPFGTLGWPEQTE 502

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               + +P DL + G DIL F    +         ++P  K           G+K+SKS 
Sbjct: 503 TLD-RHYPNDLLISGFDILFFWDARMAMQGLEFMGDVPWRKLYLHGLVRAADGQKMSKSK 561

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+DP+ +I+  G DALR+F+    + G+D   D+  ++     + A  + N  +R + 
Sbjct: 562 GNVVDPLGLIDRFGADALRFFMAAMESQGRDVKMDEKRVEG--YRNFATKLWN-AARFLQ 618

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
                       P A    +  I++     +Q I   M       A   +   V +   D
Sbjct: 619 SNGVTASTGHEAPHAGAPVNRWIIAETVATVQAIDTAMTELRFDAAANAIYHFVWDQFCD 678

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +      L K + D       V      Q+ ++L  F+P +  +++++    +    
Sbjct: 679 WYIE------LTKGSMDE--ETKAVAGWAFDQILVMLHPFMPFITEELWNLTGERENELI 730

Query: 486 FQSLDQRLKP 495
                Q L  
Sbjct: 731 VARWPQALYA 740



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 22/172 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           HIGHA +  + D++ R+ RL G D L+  GTD  G       +  
Sbjct: 36  PFTIVNPPPNVTGSLHIGHALDNTLQDIVIRYERLRGKDALWVVGTDHAGIATQMVVERQ 95

Query: 66  GVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                             KV+  +       +R  R +   +D + + F  T ++     
Sbjct: 96  MEARQDKRTNYSRDQFVEKVWEWKAESGGAITRQLRRLGCSMDWANERF--TMDEGFSKA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++  +G +Y+      +     +  +D EV        +     P+
Sbjct: 154 VVKTFVELHKRGLLYRDKRLVNWDPHFRSAISDLEVETQEVKGGFWHFRYPL 205


>gi|304391388|ref|ZP_07373330.1| valyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295617|gb|EFL89975.1| valyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 1050

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/294 (22%), Positives = 112/294 (38%), Gaps = 24/294 (8%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L     T  W + +  DP  ++  W  +     +T G+ D      A  +  D+ V G D
Sbjct: 596 LDDDDDTVLWNVDLYRDPD-VLDTWFSSALWPFSTLGWPDETP-ELASHYQTDVLVTGFD 653

Query: 267 ILRFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEKISKSLGNVIDPI 314
           I+ F    W A ++   L   K            V+ H  +  K G K+SKS GNVIDP+
Sbjct: 654 IIFF----WVARMMMMGLHFMKDEDGKPVEPFHTVYVHALVRDKTGAKMSKSKGNVIDPL 709

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+++E G DALR+ L    A G+D   D   +      +    + N  +R   M      
Sbjct: 710 ELMDEYGTDALRFTLAIMAAQGRDVKLDTARIAG--YRNFGTKLWN-ATRFAQMNEVAPV 766

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
                  A  + +  +L+  S  + EI + ++    + A A     V     D Y +  K
Sbjct: 767 QGFDPASATHQLNRWVLTELSATITEIDDALEKYRFNDASAAAYRFVWNTFCDWYLELLK 826

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           P      +    +        V+ ++  LL  F+P +  ++     +  E    
Sbjct: 827 P-VFNGDDEAAKTEARATAAHVLGEIYRLLHPFMPFITEELATETGMLGEGELL 879



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 58/172 (33%), Gaps = 23/172 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA    + D+L R+ R+ G +VL+  G D  G       +   
Sbjct: 38  FTIVIPPPNVTGSLHMGHALNNTLQDILVRWKRMLGYNVLWQPGMDHAGIATQMVVERKL 97

Query: 67  VTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             T+           F+++                + +    D S + F  T ++     
Sbjct: 98  AETQQPSRREMGRETFIEKVWEWKEESGGTIFNQLKRLGASCDWSRERF--TMDEGLSKA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              ++ K+ D+G IY+G     +    E   +D EV       +      P+
Sbjct: 156 VVEVFVKLYDEGLIYRGKRLVNWDPHFETAISDLEVENIETNGHMWHFKYPL 207


>gi|118580151|ref|YP_901401.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231626|sp|A1APS3|SYL_PELPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118502861|gb|ABK99343.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 823

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     A
Sbjct: 30  SDRPKYYLLEMFPYPSGRIHMGHVRNYSIGDVIGRFKRMRGFNVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     + +SYD    + T +  ++   + ++ ++  KG  
Sbjct: 90  AIQNKSHPAKWTYENIDYMRGQLKKMGLSYDWGRELATCDLEYYRWEQKIFLEMFAKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V  GA         +PVQ  E + +FFR++ Y ++LLSY
Sbjct: 150 YKKTSYVNWCPTCETVLANEQVEDGA----CWRCDSPVQQKELDQWFFRITQYAEELLSY 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E  P +   +    +       G
Sbjct: 206 TEKLPGWPERVLVMQKNWIGKSHG 229



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 29/269 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y     +    D ++  +W   D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFVQSSWYFLRYCCPDFHDAPLDRTRVDYWMSVDQYIGGIEHAVLHLLYARFFTKV 553

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +  + P    + + G ++  G K+SKS GNV+DP  +IE  G D  R F +   
Sbjct: 554 LRDLGYVECSEPFT-NLLTQGMVIKDGAKMSKSKGNVVDPNALIERYGADTARLFSLFAA 612

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  ++  G+         N +  LV+  + +I       +P     T  + ++   
Sbjct: 613 PPEKDLDWNDQGVDGSFR--FLNRVWKLVNDRLELISGAAPLDVP---GLTGEERTLRRA 667

Query: 394 CSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + ++++ E+++     + A+A V+ L++ + +  D   P                V  
Sbjct: 668 VHKTIRKVTEDIEGRFHFNTAIAAVMELLNVL-QSADLSTP------------QAGAVMK 714

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E +  L +LL  FVP +A +++  +    
Sbjct: 715 EALESLVLLLAPFVPHMAEELWQRMGQPG 743


>gi|37679095|ref|NP_933704.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|48428521|sp|Q7MN06|SYL_VIBVY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|37197837|dbj|BAC93675.1| leucyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 857

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  TKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYQKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLEGWPEMVKTMQRNWIGRSEG 229



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 552 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRITSAVDNEGRNVE 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V+              A +   +++     + + ++ +++  +   + A+A
Sbjct: 666 RFLKRVWKLVNEHTSKGAAEAVNAAALSGDQKALRRDVHKTIAKVTDDVARRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L++            +L K   + A     +  E ++ +  +L    P +  +++ 
Sbjct: 726 AVMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHICFEMWT 772

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L   D +N  + + D++
Sbjct: 773 ALGQQDIDNASWPTYDEQ 790


>gi|315925980|ref|ZP_07922185.1| isoleucyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620801|gb|EFV00777.1| isoleucyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 1042

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/405 (17%), Positives = 140/405 (34%), Gaps = 74/405 (18%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +      P+ +  +  ++  ++  +DKL+    ++     P     +        L
Sbjct: 386 HNYPHCWRCKTPLVYYAKPSWYIEITKLKDKLIEN--NNGVNWFPPFVGEKRFGNWLENL 443

Query: 205 KDLSLSRKTFDWGIKI----PDDPQ----------------------------------- 225
            D +LSR    WG  +     DDP                                    
Sbjct: 444 NDWALSRSR-YWGTPLPIWRCDDPDCGHTTSVGSRRELAERAVETIDESIELHRPYVDEV 502

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                           ++ VW D+ +       Y      + A  +PAD    G D    
Sbjct: 503 HLTCPECGGRMSRVPDVVDVWFDSGSMPFAQQHYPFENKDAWADQFPADFICEGIDQTRG 562

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   +  ++   P    + +   +  +G+K+SKS GN ++P  + ++ G DALR++
Sbjct: 563 WFYSLLAISTFITGKSPYHNVLVNDLVLDAEGQKMSKSKGNTVNPFALFDQYGADALRWY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--------YDGMIPTP 380
           L+          +D++GLK+ V +   N   N  +        D         D      
Sbjct: 623 LMYVSPAWTPTRFDEEGLKE-VRSKFFNTFKNTYAFFALYANTDGIDADALAGDAFAVPV 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF--DAQKPWEL 436
                 D  ILS   R+++++   M     +  +  + + V+E   + Y   + ++ W  
Sbjct: 682 ADRPVIDRWILSKYHRLVRDVTAAMDAYNHNTVVHLIQNFVNEDLSNWYIRRNRRRFWAS 741

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 +A  V   T EV+  L  L   F P +  +++  L  A+
Sbjct: 742 AMNADKKA--VYRTTFEVLEGLCRLCAPFAPFITEEMYRDLTGAE 784



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 19/164 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E           N +P I H     + D + ++  + G  VL   G D HG  +    
Sbjct: 39  DDENFVFFEGPPTANGKPGIHHVLARTLKDSVCKYQTMRGHRVLRKAGWDTHGLPVEIEV 98

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       +  V      +R++   +   I  D    T +  + 
Sbjct: 99  EKQLGIHSKPEIEDYGIAAFNKKCRESVFTYEAQWRELTRRMGYFIDLDHPYITLDNDYI 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           ++   +  K  ++G IY+G     Y  R        EV +G   
Sbjct: 159 ESEWWILNKFFEEGYIYEGHKILPYCPRCGTGLASHEVAQGYQM 202


>gi|304440167|ref|ZP_07400058.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371430|gb|EFM25045.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 1032

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/420 (15%), Positives = 147/420 (35%), Gaps = 71/420 (16%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              +  +      P+ +     ++  ++ ++DKL+    ++     P     +       
Sbjct: 382 MEHNYPHCWRCGTPLIYYAHPSWYIEVTKFKDKLIEN--NNGVNWFPDFVGEKRFGNWLE 439

Query: 203 GLKDLSLSRKTFDWGIKI------------------------------------------ 220
            L D ++SR    WG  +                                          
Sbjct: 440 NLNDWAISRSR-YWGTPLPLWRCSCGNVRSIGSKEELVKEAIEDIDESVELHRPYVDNVH 498

Query: 221 ---------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                     +  + ++ VW D+         Y         + +PAD    G D     
Sbjct: 499 LKCDKCGKEMNREKDVIDVWFDSGAMPFAQWHYPFEHKDDFDQLFPADFICEGIDQTRGW 558

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+++   +  ++   P    + +   +   G+K+SKS GN ++P E+  + G D +R++L
Sbjct: 559 FYSLLAISTYVTGKSPYKNVLVNDLILDKYGKKMSKSKGNTVNPFELFNKYGADVVRWYL 618

Query: 330 VREIACGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +          +D+DGL++  +        I N  S   +    D   M      +T  D
Sbjct: 619 IYVSPPWAPTKFDEDGLREVESKFFRSLRNIYNFFSLYANTDGIDPRDMNVDEKDYTLID 678

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS 445
           +  +S  + +++ + E+M+   + + +  +   V     + Y    +    K        
Sbjct: 679 KWFISKYNSLVKSVNEDMEIFELTKVVRDIQDFVIEDFSNWYIRRNRRRFWKPEMDAEKM 738

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----------FVADENRCFQSLDQRLK 494
            V  VT +V+  ++ L+    P ++ ++F  L             ADE++  ++L+++++
Sbjct: 739 AVYKVTYDVLLGISKLIAPIAPFISEELFKSLTDKESVHLEDYPTADESKINKTLEEKME 798



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 19/162 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK          N +P I H     + D+  R+  + G  V    G D HG  +    + 
Sbjct: 40  EKYVFYEGPPTANGRPGIHHVLARTLKDLTCRYKTMKGYQVKRKAGWDTHGLPVEIEVEK 99

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 +  V +  + +R++ + +   +  D+   T +  + ++
Sbjct: 100 KLDLHNKQDIEKYGIEDFNKKCRESVFEYEKEWRELTERMAYLVDLDNPYITLQDNYIES 159

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
              +   +   G IY+G     Y  R        EV +G   
Sbjct: 160 VWHILDSMFKDGLIYEGHKILPYCPRCGTGLASHEVAQGYQM 201


>gi|163752480|ref|ZP_02159669.1| leucyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327624|gb|EDP98819.1| leucyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 863

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+ + H+GH     I DV+AR+ RL G +VL   G D  G     A
Sbjct: 30  ENKEKFYCLAMFPYPSGRLHMGHVRNYTIGDVIARYQRLQGKNVLQPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    ++   +L   YD    I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   DE    +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSSVNWCPNDETVLANEQVIDG----CCWRCDTVVEQKEIPQWFIKITEYADELLTD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +   E+   ++           G+     +  S ++FD     PD    + YV I A 
Sbjct: 206 LDQLDEWPEQVKTMQRNWIGRSEGIEMTFKVVDSEESFDIYTTRPDTVMGVTYVAIAAG 264



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 84/322 (26%)

Query: 232 IDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVIGKDILRFHAIYWPAFL-------L 280
               + Y                KA +W P D ++ G +    H +Y+  F        L
Sbjct: 496 FMESSWYYARYCSPHADQMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDIGL 555

Query: 281 SANLPLPKKVFSHGFIL---------------------------HKGE------------ 301
                  K++ + G +L                            KG             
Sbjct: 556 VDCDEPAKRLLTQGMVLADAFYYNNDRGARVWVAPSDVTVQETDDKGRILKAIDKDGNEL 615

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++ + G D +R F++          + +  ++        
Sbjct: 616 VYTGMSKMSKSKNNGIDPQEMVNKYGADTVRLFMMFAAPPELTLEWQESSVE-------- 667

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQL-IH 411
            G    + R   +                  D   + +     + + ++ +++  +   +
Sbjct: 668 -GAHRFIKRLWKLAHDHIAKGPTAALDIKSLDAKQKDLRRELHKTIVKVTDDIGRRQMFN 726

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++ +      + P   +++  DRA     +  E +  +  LL   +P ++ 
Sbjct: 727 TAIASIMELMNRL-----LKAP---QESEQDRA-----LLNEALSAVVRLLYPIIPHISF 773

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            +++ L   +  E+  +  +D+
Sbjct: 774 ILWNELGNPETIEDVLWPKVDE 795


>gi|207344907|gb|EDZ71895.1| YGR264Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 352

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 133/334 (39%), Gaps = 14/334 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYLTTTGY 244
                 +    S++K GLK   ++R    WG  + +      ++YVW DA   Y++ T  
Sbjct: 6   NWSKNSKTITQSWLKDGLKPRCITRDLV-WGTPVPLEKYKDKVLYVWFDATIGYVSITSN 64

Query: 245 LDNPDGSKAKFWPADL---HVIGKDILRFHAIYWPAFLLSANLPLP--KKVFSHGFILHK 299
                       P  +     +GKD + FH + +P   L           + +  ++ ++
Sbjct: 65  YTKEWKQWWNN-PEHVSLYQFMGKDNVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYE 123

Query: 300 GEKISKSLGNVIDPIEVIEE-VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             K SKS G  +      +  +     RY+L        D  +  D    R N++L   +
Sbjct: 124 NGKFSKSRGVGVFGNNAQDSGISPSVWRYYLASVRPESSDSHFSWDDFVARNNSELLANL 183

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDES-ILSVCSRVLQEIRENMQNQLIHRALAQV 417
           GN V+R +  +   Y+G++P       S+   ++   + +L    + M+     R L   
Sbjct: 184 GNFVNRLIKFVNAKYNGVVPKFDPKKVSNYDGLVKDINEILSNYVKEMELGHERRGLEIA 243

Query: 418 ISLVSEVDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +SL +  +++    K    L   +P+++  V+ V + +I  ++ ++  ++P++  KI  +
Sbjct: 244 MSLSARGNQFLQENKLDNTLFSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKM 303

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
           L               +  G  ++K  + +F R 
Sbjct: 304 LNAPALKID-DRFHLAILEGHNINKA-EYLFQRI 335


>gi|86148573|ref|ZP_01066858.1| leucyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85833639|gb|EAQ51812.1| leucyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 858

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ ++G +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWKREFATCTPEYYRWEQEFFTKLYEQGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 107/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D +V G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +      KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYHTNEKGTKEWIAPTDVTIDRDAKGRIEKAVDNQGRNVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A +   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHTHSSKGAAETVDASALSGGQKALRRDIHKTIAKVTDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K   +       +  E ++ +  +L    P ++ +++ 
Sbjct: 727 AIMELMN------------KLAKAPQESVQD-RAILDEALKAVVRMLYPMTPHISYEMWI 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ ++  + + D++
Sbjct: 774 ALGESNVDSATWPTFDEK 791


>gi|258651727|ref|YP_003200883.1| valyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258554952|gb|ACV77894.1| valyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 899

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 130/380 (34%), Gaps = 44/380 (11%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +   + ++      +F R+ +               I P E       +V   + D  
Sbjct: 362 HCSRSDDVIEPRLSTQWFVRVESLAKAAGDAVRDGRTTIHPPELAARYFDWVD-NMHDWC 420

Query: 209 LSRKTFDWG--IKIPDDPQY---------------------IMYVWIDALTNYLTTTGYL 245
           +SR+   WG  I +   P                       ++  W  +     +T G+ 
Sbjct: 421 ISRQ-LWWGHRIPVWYGPDGQMRAVGPGEEPPGEGWTQDPDVLDTWFSSGLWPFSTMGWP 479

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +  D  KA F+P  + V G DIL F  +    F L A         +P            
Sbjct: 480 EQSDTLKA-FYPTSVLVTGYDILFFWVVRMMMFGLYATANEDGEPQVPFHTVALHGLVRD 538

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SKS GN +DP++ I+  G DA+R+ L R    G D    ++ +         + 
Sbjct: 539 QFGKKMSKSRGNTVDPLKWIDTYGADAVRFTLARGSNPGADQAIAEEWVAGA--GKFCSK 596

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N  +R   +       +       T +D  IL     ++      + +    +A   +
Sbjct: 597 LFN-ATRFALLNGAVVPDVALIEADLTPADRWILDRLDEMVTTTTALLGDFQFAKAAEGL 655

Query: 418 ISLVSE--VDRYFDAQKPWELK----KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
                +   D Y +  K         +  PDR  T   V   V+  L  LL  FVP + +
Sbjct: 656 YHFAWDEVCDWYLELAKVQIAAGERGEDGPDRLVTTRQVLGTVLDGLLRLLHPFVPFVTD 715

Query: 472 KIFDILFVADENRCFQSLDQ 491
            ++  L    E+    +  +
Sbjct: 716 TLWTSL-TGQESLVIAAWPE 734



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 22/164 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+   I           H+GHA +  + DVL R+HR+ G + L+  G D  G       
Sbjct: 47  ERKPFSIVLPPPNVTGNLHVGHALDHTLMDVLTRWHRMSGDEALWLPGMDHAGIATQTVV 106

Query: 63  QNAGVTT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +    +               KV+  +           + + D +D   + F  T ++  
Sbjct: 107 ERQLASKGSSRQELGRELFVQKVWDWKAESGGAILGQMKRLGDSVDWDRERF--TLDEGL 164

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D  + ++K++ + G IY+      +        +D EV    D
Sbjct: 165 SDAVQTIFKRMFEDGLIYRAERIINWCPGCLTALSDIEVEHSDD 208


>gi|148981396|ref|ZP_01816392.1| leucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960888|gb|EDK26218.1| leucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 858

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 109/318 (34%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +      KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYHENEKGTKEWVAPTDVAVERDGKGRITSAKDNQGRGVA 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A + + +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHAHSSKGAAESVDVAALSGNQKALRRDVHKTISKVTDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++ 
Sbjct: 727 AIMELMN------------KLAKAPQESAQD-RAILDEALKAVVRMLYPMTPHISYEMWI 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  +D ++  + + D++
Sbjct: 774 ALGESDVDSATWPTFDEK 791


>gi|86741959|ref|YP_482359.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568821|gb|ABD12630.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 662

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 95/530 (17%), Positives = 191/530 (36%), Gaps = 36/530 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             +++ +    PN   H+GH     + AD   RF R++G ++   TG+D+    +   A+
Sbjct: 120 RPVFVFSTPPTPNGDLHLGHLSGPYLGADAYVRFQRMNGANIWHLTGSDDFQSYVVDCAR 179

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG 122
             G +        S    +   ++DI  D +  T  +  +    +  + ++ D G I   
Sbjct: 180 REGRSNAETAAHYSAEIAETLRLMDIPLDQYTVTNADPSYVPALKDFFTRLVDSGAIAPS 239

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR-------------- 168
                +  +   Y  + +V  G  G       N  +   E                    
Sbjct: 240 DGPALFDPKTGQYLYEVDVRGGCPGCGEITGGNICEECGEPNTVVDLADPVAKPSGEAPA 299

Query: 169 -------LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  +    +   +  + H    +P   R       +    D+ +S  + DWGI   
Sbjct: 300 AGTVRRYVLPLHEHAGTVLDHHRRGRVPARLRELAARLFRRERVDIPVSHPS-DWGITPH 358

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIY 274
             +    +++VW +    +L     L    G       P D    +H  G D   +HAI 
Sbjct: 359 EANGAGQVIWVWPEMAFGFLHGIQKLGERIGRDWTAAEPTDDWKIVHFFGYDNSFYHAIL 418

Query: 275 WPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +P     A       +  H   F L+ G K S    + I   ++++   VDA+RYFL R 
Sbjct: 419 YPVLYQLALPGWTPDIDYHVNEFFLYDGLKFSTGRRHAIWGKQILDAGSVDAVRYFLARS 478

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +   ++ D  +  +   L       ++     +   YDG+ P  G +T      LS
Sbjct: 479 RPEAQRTNFELDAYEHTLATTLIGTWQAWLNDLGQHVADHYDGVAPDAGNWTPEHAGFLS 538

Query: 393 VCSRVLQEIRENMQ--NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  L  +  +++     +++A A++ +LV++  R+   ++        P+   T   +
Sbjct: 539 QLAARLGALTASLRPGGFSLNQAAAELDALVADALRFSRRERVLARAGGMPNEVRTATAL 598

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            +     LA      +P+ A ++ + L     ++ + S  + + PG  + 
Sbjct: 599 ELAAAALLAHGAAPVMPRFAVRLAEALGQPAPDQ-WPSTVELIPPGSKVT 647


>gi|94501467|ref|ZP_01307986.1| leucyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426432|gb|EAT11421.1| leucyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 859

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  NREKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYERMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    + D+N    +   + L   Y  D  + T +  ++   +  + K+ +KG  Y
Sbjct: 91  IKNQTAPGKWTDENIAYMKGQLNSLGFGYDWDRELATCKPEYYRWEQWFFTKLVEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V +G           P++  E   +F R++ Y ++LL+  
Sbjct: 151 KKVSAVNWCPHDQTVLANEQVIEG----CCWRCDTPIERKEIPQWFIRITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +    +   ++           G++          +GIK  + P  +     D L  
Sbjct: 207 DQLDGWPDQVKAMQRNWIGKSQGVQ--------MRFGIKDKEIPLEVYTTRPDTLMG 255



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 93/303 (30%), Gaps = 75/303 (24%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y              D  +A +W P D ++ G +    H +Y   F        
Sbjct: 493 FMESSWYYARYCSPQADDIMLDPEEANYWLPVDQYIGGIEHAILHLLYARFFHKLLRDTG 552

Query: 280 -LSANLPL-----------------------------------------PKKVFSHGFIL 297
            +  + P                                           K  +    + 
Sbjct: 553 LVKGDEPFNSLLCQGMVLADAFSYQNENGGKEWVNPADVEVERDAKGRITKASYEGKELT 612

Query: 298 HKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           H+G  K+SKS  N +DP E I++ G D +R + +      +   +   G++       A 
Sbjct: 613 HEGVIKMSKSKNNGVDPQEAIDQYGADVVRLYTMFAAPPEQSLEWSNSGVQG------AQ 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
                V R  S +L   D       A +   +         +Q++ +++ +    + A+A
Sbjct: 667 KFLQRVWRLASELLDGSDIPAIDAEALSSEQKDARRKTHETIQKVSDDIGRRYAFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L +             L K +   A     +  E +  +  +L    P +++ I+ 
Sbjct: 727 AVMELTN------------TLVKLDKSDAQN-RAILHEGLSAMVKMLAPIAPHVSHVIWQ 773

Query: 476 ILF 478
            + 
Sbjct: 774 EMG 776


>gi|254464224|ref|ZP_05077635.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685132|gb|EDZ45614.1| valyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 1023

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 19/270 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIY 274
           + +  DP  ++  W  +    + T G+ +  + +K K++P    V G+DIL F     + 
Sbjct: 576 VPMFRDPD-VLDTWFSSGLWPIGTLGWPEWTEETK-KYFPTSTLVTGQDILFFWVARMMM 633

Query: 275 WPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +L  NLP+ +++      LH      KG+K+SKS GNV+DP+E+IEE G DALR+ 
Sbjct: 634 MQLAVLDENLPVKERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIEEFGADALRFS 693

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESD 387
                A G     D + LK     +    + N V+ +  + +  +       P A    +
Sbjct: 694 SAAMAALGGVLKLDMERLKG--YRNFGTKLWNAVNFAHFNNVYDENVPAYACPDAKAAVN 751

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA- 444
           + I+   ++V  E+   ++    + A   + + V     D Y +  KP  L  ++ +   
Sbjct: 752 QWIIGETAKVRVEVDAALEAFRFNDAANALYAFVWGKVCDWYIELSKP--LFGSDDEAVI 809

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +        V+ Q  ILL   +P +  +++
Sbjct: 810 AETRQTLGWVLDQCMILLHPIMPFITEELW 839



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 36/183 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G       +    
Sbjct: 40  CIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGYDTLWQPGTDHAGIATQMVVERELA 99

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLDISYDDFIRTT------------ 98
            T+                  + +++     +    L  S D F RT             
Sbjct: 100 KTQQPSRRELGREKFLEKVWEWKEKSGGTIVEQLKRLGASCD-FSRTAFTMAGAQGDTRV 158

Query: 99  ----EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++ ++ +KG IY+G     +    E   +D EV       +     
Sbjct: 159 GHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFK 218

Query: 155 NPV 157
            P+
Sbjct: 219 YPL 221


>gi|320157153|ref|YP_004189532.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932465|gb|ADV87329.1| leucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 857

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  TKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 552 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRITSAVDNEGRNVE 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V+              A +   +++     + + ++ +++  +   + A+A
Sbjct: 666 RFLKRVWKLVNEHTSKGAAEAVNAAALSGDQKALRRDVHKTIAKVTDDVARRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L++            +L K   + A     +  E ++ +  +L    P +  +++ 
Sbjct: 726 AVMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHICFEMWT 772

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L   D +N  + + D++
Sbjct: 773 ALGQQDIDNASWPTYDEQ 790


>gi|27363751|ref|NP_759279.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|29337023|sp|Q8DFE2|SYL_VIBVU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27359867|gb|AAO08806.1| leucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 857

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  TKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 552 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRITSAVDNEGRNVE 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V+              A +   +++     + + ++ +++  +   + A+A
Sbjct: 666 RFLKRVWKLVNEHTSKGAAEAVDAAALSGDQKALRRDVHKTIAKVTDDVARRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L++            +L K   + A     +  E ++ +  +L    P +  +++ 
Sbjct: 726 AVMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHICFEMWT 772

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L   D +N  + + D++
Sbjct: 773 ALGQQDIDNASWPTYDEQ 790


>gi|163848242|ref|YP_001636286.1| isoleucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526152|ref|YP_002570623.1| isoleucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669531|gb|ABY35897.1| isoleucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450031|gb|ACM54297.1| isoleucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 1066

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 133/390 (34%), Gaps = 14/390 (3%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
               +  Y    + + +   N+ +++   D        N ++    +    R   +   +
Sbjct: 415 YYAKRSWYIRTTAFKADLVANNQQIHWVPDHIRDGRFGNWLE-NNIDWAISRERYWGTPI 473

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY--------IM 228
             +  +    ++ I    E+   V   L+DL L R   D    + +DP++        + 
Sbjct: 474 PIWTNADGSHMVCIGSLAELEEKVGRSLRDLDLHRPYIDE--VVWEDPEHGLMRRIPDVA 531

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+ +  +    Y            PAD      D     F+ ++  + LL      
Sbjct: 532 DCWFDSGSMPVAQWHYPFENRDIFEMAHPADYICEAVDQTRGWFYTLHAISTLLFDRPAF 591

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +   G K+SKS GNVI+P EVI   GVDALR++L      G    +    +
Sbjct: 592 KNVICLGHILDENGLKMSKSKGNVIEPEEVINAYGVDALRWYLFTAAPPGNARRFSMALV 651

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
            + +   L               L  +             D   L+  ++++Q++    +
Sbjct: 652 SESMRKFLLTLWNTYAFFVTYANLDQWQPGSNRTAELQPIDRWALAALNQLVQQVTTCFE 711

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQAF 465
              ++ A   +   V E+  ++  +      K+  D             +  +A L   F
Sbjct: 712 EYDVYTAANAIEHFVDELSNWYVRRNRRRFWKSEADADKEAAYQTLYTCLVTVAKLAAPF 771

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +P ++ +I+  L    +    +S+     P
Sbjct: 772 IPFVSEEIYRNLVAERDPSAAESVHLAQWP 801



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 21/160 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAKAAQ 63
           +           N +P + H       DV+ R+  + G  ++    G D HG  +    +
Sbjct: 37  KPFVFYEGPPTSNGRPGLHHTISRSFKDVILRYRAMQGYRIIGRREGWDTHGLPVEIEIE 96

Query: 64  NA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  +  V +  + ++     +    S D +I T E  + +
Sbjct: 97  KKLGFSGKPDIERFGIAEFNRLCRESVWEYIQEWKAFTKRIAFWLSEDAYI-TYENDYIE 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           +   +++++ D+G +++      +  R     +D EV  G
Sbjct: 156 STWWIFRQLWDRGLLFRDYKVTMHCPRCGTSLSDHEVSLG 195


>gi|303279394|ref|XP_003058990.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460150|gb|EEH57445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1065

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 21/288 (7%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +    + ++  W  +     +T G+ D       KF+P  +   G DIL F    +   +
Sbjct: 597 VLYQEEDVLDTWFSSGLWPFSTLGWPDEDAADFKKFFPTQVMETGHDILFFWVARMVMMS 656

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           + ++  LP             KG K+SKSLGNV+DP+ VI+E G DALR+ L    A G+
Sbjct: 657 YGMTNTLPFHTVYLHGLVRDEKGRKMSKSLGNVVDPLNVIDEQGCDALRFTLATGTAAGQ 716

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVS-----------MILKDYDGMIPTPGAFTES 386
           D   + D L    N +  N I N     +             ++++ + +     +   +
Sbjct: 717 DLNLNMDRLAS--NRNFTNKIWNAGKFLLYALEGMSDDDRVALVREAETVPNDLASLPLA 774

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           +  I+S     +  +           A     +       D + +  K   L   +   A
Sbjct: 775 ERWIVSRLHATVDHVTTAHDKHDFGEAGRAAYAFFYDDFADWFIEGAKS-RLYSGDAAAA 833

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NRCFQSL 489
                V + V+ +   LL  FVP +  +++  +    E    R + +L
Sbjct: 834 RRTRAVILYVLERTLRLLHPFVPYVTEEVWRNIPHDGETLMTRAWPTL 881



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 63/214 (29%), Gaps = 56/214 (26%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E   I+          H+GHA  + + D++AR  R+ G   L+  GTD  G         
Sbjct: 126 EPFTIAMPPPNVTGALHMGHAMFVTLQDIMARNARMRGRPTLWLPGTDHAGIATQARPPH 185

Query: 60  ------------------------------------------------KAAQNAGVTTK- 70
                                                            A +      K 
Sbjct: 186 TVPAIDAFRPHLTPFNSTPTSVGPPPDPQLVVERALEAEGKTRMGIGRDAFEKRTWEWKA 245

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            +  + +   R +    D S + F  T +    D     +  + D+G IYKG Y   ++ 
Sbjct: 246 EYGGRIAGQIRRLGASCDWSRERF--TLDDGLSDAVLEAFVSLHDRGLIYKGTYMVNWAP 303

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           + +   +D EV    +          V+  E++ 
Sbjct: 304 KLQTAVSDLEVEYSDEPGTLYYFKYFVEGGEDDS 337


>gi|145628147|ref|ZP_01783948.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979922|gb|EDJ89581.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 434

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPEYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P++   ++           G
Sbjct: 206 LDPLPQWPDMVKTMQRNWIGRSEG 229


>gi|260898991|ref|ZP_05907432.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308087477|gb|EFO37172.1| leucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 820

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 113/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFIL------------------------------------HKGE-- 301
           ++++ P  K++   G +L                                    ++G   
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRIISAKDNEGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V    +          A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHAEKGAAEAVDTAALSGEQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVTMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  +D +N  + + D++
Sbjct: 772 TALGESDIDNAAWPTFDEK 790


>gi|261253668|ref|ZP_05946241.1| leucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937059|gb|EEX93048.1| leucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 858

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +      KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYHENEKGTKEWVAPTDVAVERDGKGRITSAKDNQGRDVA 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A +   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHAHSSKGAAESVDVAALSGDQKALRRDVHKTISKVTDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++ 
Sbjct: 727 AIMELMN------------KLAKAPQESAQD-RAILDEALKAVVRMLYPMTPHISYEMWI 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ ++  + + D++
Sbjct: 774 ALGESNVDSTTWPTFDEK 791


>gi|218708739|ref|YP_002416360.1| leucyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782843|sp|B7VKF7|SYL_VIBSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218321758|emb|CAV17713.1| Leucyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 858

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ ++G +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWKREFATCTPEYYRWEQEFFTKLYEQGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D +V G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +      KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYHENEKGTKEWIAPTDVTVERDGKGRIEKAVDDQGREVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A + + +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHAHSSKGAAETVDASALSGNQKALRRDIHKTIAKVTDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K   +       +  E ++ +  +L    P ++ +++ 
Sbjct: 727 AIMELMN------------KLAKAPQESVQD-RAILDEALKAVVRMLYPMTPHISYEMWI 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ ++  + + D++
Sbjct: 774 ALGESNVDSATWPTFDEK 791


>gi|306840459|ref|ZP_07473218.1| valyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289474|gb|EFM60692.1| valyl-tRNA synthetase [Brucella sp. BO2]
          Length = 910

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYDEE 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLELLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESRELKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|90103532|sp|Q8FN65|SYV_COREF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 903

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 118/361 (32%), Gaps = 47/361 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++            +    I P         +V   + D  +SR+   W
Sbjct: 372 IEPRLSLQWWVKVEELAKMSGDAVRAGDTTIHPKSLEPRYFDWVDD-MHDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ D       K
Sbjct: 430 GHRIPIWYGPDGDVICVGPDEQAPEGYTQDPDVLDTWFSSALWPFSTMGWPDKTP-ELDK 488

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 489 FYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGTDGRPQVPFTDLFLHGLVRDE 548

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  +
Sbjct: 549 HGRKMSKSLGNGIDPMDWVDNYGADALRFTLARGANPGVDLPVGEDSAQSSRN--FATKL 606

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M        +P     T++D  IL     V   + + + N    +A  ++ 
Sbjct: 607 FN-ATRFALMNGA-VSEGLPERAELTDADRWILDRLEEVRGHVDDYLDNYQFAKANEELY 664

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    ++   +R      V   V+  L  LL   +P +   ++  
Sbjct: 665 HFAWNEFCDWYLEIAKVQIPREGVTERGRNTQQVLGHVLDALLRLLHPAMPFVTEVLWKA 724

Query: 477 L 477
           L
Sbjct: 725 L 725



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I         Q H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 49  SEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTK 108

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     K +  +     R + D +D S + F  T ++
Sbjct: 109 VEEMLKETEGKSRYDYSREEFIEKVWEWKKEYGGKIGEQMRAIGDSVDWSRERF--TLDE 166

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 167 GLSRAVQTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVY 209


>gi|90581608|ref|ZP_01237399.1| leucyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437191|gb|EAS62391.1| leucyl-tRNA synthetase [Vibrio angustum S14]
          Length = 857

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 106/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 552 VTSDEPFKQLLCQGMVLADAFFYTTDKGGKEWVAPTDVTVERDGKGRITSAVDSQGHNVE 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A T   +++     + + ++ +++  +   + A+A
Sbjct: 666 RFLKRVWKLVREHTAKGAAEAVDVSALTGDQKALRRDIHKTIAKVSDDIGRRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K + +       +  E ++ +  +L    P +  +++ 
Sbjct: 726 AIMELMN------------KLAKASQESVQD-RAILDEALKAIVTMLYPITPHICFEMWA 772

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L   D +N  +   D++
Sbjct: 773 ALGETDIDNAQWPQADEK 790


>gi|84394388|ref|ZP_00993107.1| leucyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84374990|gb|EAP91918.1| leucyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 858

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ ++G +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWKREFATCTPEYYRWEQEFFTKLYEQGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 107/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D +V G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +      KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYHTNEKGTKEWIAPTDVTIDRDAKGRIEKAVDNQGRDVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A +   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHAHSAKGAAEAVDASALSGDQKALRRDIHKTIAKVTDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K   +       +  E ++ +  +L    P ++ +++ 
Sbjct: 727 AIMELMN------------KLAKAPQESVQD-RAILDEALKAVVRMLYPMTPHISYEMWI 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ ++  + + D++
Sbjct: 774 ALGESNVDSATWPTFDEK 791


>gi|306843842|ref|ZP_07476439.1| valyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275843|gb|EFM57563.1| valyl-tRNA synthetase [Brucella sp. BO1]
          Length = 910

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYDEE 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLELLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|255263511|ref|ZP_05342853.1| valyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105846|gb|EET48520.1| valyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 974

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 146/405 (36%), Gaps = 33/405 (8%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K +   GD  K       +L D+ + + D++   A     +     V   EE+ YF    
Sbjct: 426 KIMQPFGDRSKVVIE--PALTDQWFVDTDQIVGPALDAVRDGTVKIVPEREEKVYF---- 479

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS----RKTFDWGIKIPDDPQY 226
                 L   E               + F   G +  +++    +      +++  DP  
Sbjct: 480 ----HWLENIEPWCISRQLWWGHQIPVWFDADGNQYCAVTEAAAQAQAGADVELTRDPD- 534

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSAN 283
           ++  W  +    L T G+ +       K++P    V G DIL F     +     +L+ +
Sbjct: 535 VLDTWFSSGLWPLGTLGWPNETP-ELDKYFPTSDLVTGSDILFFWVARMMMMQLAMLTDD 593

Query: 284 LPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            P  +++      LH      KG+K+SKS GNVIDP+++I+E G DALR+      + G 
Sbjct: 594 KPAAERIPFDTIYLHGLVRDAKGKKMSKSTGNVIDPLDIIDEFGADALRFTNAAMASLGG 653

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCS 395
               D          +    + N   R   M        +       +   ++ I+   +
Sbjct: 654 TLKLDTQRF--TGYRNFGTKLWN-ACRFAEMNGVYEGPRVALADLIPQQTVNKWIIGETA 710

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +V +E+   +     + A   + + V     D Y +  KP  L+  + D+ +    V   
Sbjct: 711 KVREEVDAALAAYRFNDAANALYAFVWGKVCDWYVELSKP-LLQGDDADKLAETQRVMAW 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           ++ Q  + L   +P +  +++      DE             G +
Sbjct: 770 ILDQCLVFLHPIMPFITEELWAETGTRDEMLAVTDWPTFAADGLV 814



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 37/180 (20%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
              +  PN     H+GHA+   + D+L R+ R+ G D L+  G D  G       +    
Sbjct: 40  CIMLPPPNVTGVLHMGHAFNHTLMDILIRWKRMQGFDTLWQPGLDHAGIATQMVVERQLA 99

Query: 64  -----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE------- 99
                          T K++  +           + +   +D S   F  T +       
Sbjct: 100 EAGSPGRVELGREAFTQKIWEWKEESGGTIVAQDKRLGASMDWSRLAF--TMDGAPGQPG 157

Query: 100 ----KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
                  HD     + ++  KG IY+G     +    E   +D EV     DG  ++ ++
Sbjct: 158 GAQGPDFHDAVIKTFVEMYKKGLIYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFKY 217


>gi|255016634|ref|ZP_05288760.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 185

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/178 (42%), Positives = 115/178 (64%), Gaps = 6/178 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 3   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   ++K++ ++GDIY 
Sbjct: 63  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFKQLLEQGDIYL 122

Query: 122 GCYSGWYSLRDEAYYND---DEVYKGADGQYYNAQ---HNPVQWMEEEGYFFRLSAYQ 173
           G Y GWYS+ DE Y+ +   +EVYK  +G+    +    N V+ ++EE YFFR+S Y 
Sbjct: 123 GEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPSGNEVELVKEESYFFRMSKYA 180


>gi|254719043|ref|ZP_05180854.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984035|ref|ZP_06096770.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306840069|ref|ZP_07472855.1| valyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662627|gb|EEZ32888.1| valyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306404797|gb|EFM61090.1| valyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 910

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGEE 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLELLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|158321221|ref|YP_001513728.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141420|gb|ABW19732.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 1032

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 69/412 (16%), Positives = 150/412 (36%), Gaps = 22/412 (5%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           D+   L      F +   + ++  C      +   G      Y     L+D+   N++ V
Sbjct: 363 DIIKWLHAEGKLFHKEKFEHNYPHCWRCSTPLLYYGKPS--WYIEMTKLKDKLIENNNAV 420

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF-V 200
               D        N +       +    S Y    L+ +         +  R E++   +
Sbjct: 421 NWFPDFVGEKRFGNWLD--NLNDWAISRSRYWGTPLNIWRCGCGHTTSVGSREELVQKAI 478

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           +   + + L R   D      +  +        ++  W D+         Y      +  
Sbjct: 479 EPIDETIELHRPYVDDIHLKCEHCEGTMTRVLDVIDCWFDSGAMPFAQHHYPFENKENFN 538

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           + +PAD    G D     F+++   +  +    P    + +   +  +G K+SKS GN +
Sbjct: 539 ELFPADFICEGIDQTRGWFYSLIAISTFVMGVSPYKNVLVNDLILDKEGRKMSKSRGNTV 598

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+ ++ G DALR++L+          +D +GLK+  +             ++     
Sbjct: 599 DPFELFDKYGADALRWYLLFVSPAWSPTKFDIEGLKEVQSKFFTTIQNVYAFFALYANTD 658

Query: 372 --DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
             + +          E D  ILS  + ++ E+   +    + +A+ ++   ++E   + Y
Sbjct: 659 EININDFFIEYKDRPELDRWILSKYNNLIAEVTAELDVYDLTKAVRKIQDFLNEDLSNWY 718

Query: 428 F--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                ++ W  + T+  +A  V   T E++  L+ ++    P +A +++  L
Sbjct: 719 IRRARRRFWATELTDDKKA--VYNTTYEILEGLSRMVAPIAPFIAEELYQNL 768



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E           N +P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 37  EGKEPFIFYEGPPTANGRPGIHHVMARTLKDSVCRYKTMRGYQVKRKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V    + +R+M   +   I  D+   T +  +
Sbjct: 97  VEKQLKLASKQDIEKYGIAEFNHKCRESVFTYEKQWREMTKRMGYSIDLDNPYITLDNNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   +  K   +G IY+G     Y  R        EV +G      N    P +  ++
Sbjct: 157 IESVWWILDKFFKEGYIYEGHKILPYCPRCGTGLASHEVSQGYKEIKSNTVIAPFKVKDK 216

Query: 163 EGYFFRLS 170
           E YF   +
Sbjct: 217 EEYFLVWT 224


>gi|325958696|ref|YP_004290162.1| Valyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330128|gb|ADZ09190.1| Valyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 887

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 87/487 (17%), Positives = 157/487 (32%), Gaps = 43/487 (8%)

Query: 37  FHRLDGLDVLFTTGTD---EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD- 92
           + R    +V   T TD   E G            T   +V++   +  +  D   +  D 
Sbjct: 249 YKR----NVKIITDTDVDPEFGTGAVMVCTFGDKTDATWVNRYELDVIEAIDEKGLMKDV 304

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
              +   T K        +   +  +G + K         +        E+         
Sbjct: 305 SGKYAGMTIKECKAA---IIDDLGSEGCLVKQEQVDQNVGQCWRCKTPIEILVKKQWFVA 361

Query: 151 NAQ--------HNPVQWMEEEG---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
                       + + W+ E          S+         +      +P+   N     
Sbjct: 362 VKDLESKTLEAADEIDWIPEHMKIRLQNWASSMDWDWCISRQRLFATPIPVWYCNSCGKI 421

Query: 200 VKSGLKDL------SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           +    +DL         +K  + G         ++  W+D+    +   G+ +       
Sbjct: 422 MLPEPEDLPVDPSIEKPKKPCECGSTDMTGELDVLDTWMDSSITPMVIAGWPEP---EYK 478

Query: 254 KFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++PADL   G DI+R  A Y       L+ + P  + V +       G K+SKS GNVI
Sbjct: 479 NYFPADLRPQGHDIIRTWAFYTILRCKALTDSRPFDRIVINGMVFGEDGHKMSKSRGNVI 538

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P  V+EE G DA+R +       G D  +D   +K            N   R ++M + 
Sbjct: 539 APEAVVEEYGADAMRLW-SANSVPGSDVPFDWKDVKNGY--KFLRKFWN-AFRFINMHIA 594

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +YD            D  ILS  + +++++  ++ N     A  ++ + V     D Y +
Sbjct: 595 NYDVDNVEFNIRNPMDRWILSKLNYLVEDVTNHLNNYNFADARNKIQAFVWHDFCDEYIE 654

Query: 430 AQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           A K      +    +      +    VI     LL    P    ++   L    E+    
Sbjct: 655 AVKYRLYADSEDLQESKDAARHTLKTVISTSLKLLAPITPHFTEEVNQYLDEECESIHKS 714

Query: 488 SLDQRLK 494
           +  + LK
Sbjct: 715 AWPEPLK 721



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 58/165 (35%), Gaps = 15/165 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  I T   YP    HIGH       D++AR+ R++G DV+F  G D HG       
Sbjct: 35  SRPRYIIDTPPPYPTGSIHIGHVLNWTFIDIIARYMRMNGYDVMFPQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                  N +  ++    L  S D      T    +    +
Sbjct: 95  EEIHEIKKNDIPRDEFRDMCIDLTKTNIKQMKEQMQGLGFSQDWSREFVTMTPEYRAKTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           + + K+ +K  IY+  +   +  R E      EV    +  Y N 
Sbjct: 155 LSFLKLYNKKLIYRAVHPVNWCPRCETAIAFAEVDYNENQTYLNY 199


>gi|300725029|ref|YP_003714355.1| valine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631572|emb|CBJ92281.1| valine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 965

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 138/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGDIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ +
Sbjct: 446 GHRIPAWYDTQGNVYVGRDEEEVRRENNLGTDIVLTQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P ++ V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTNVLVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMMQPQLAEKISKRTEKQFPAGIEAHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLQG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            + + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 682 MSLSLADRWILAEFNQTVKTYREALDTYRFDIAANILYEFTWNQFCDWYLELSKP-AINK 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  +EV+  L  L    +P +   I+  + V
Sbjct: 741 GTEAEVRAARHTLIEVLEGLLRLAHPIIPFITETIWQRVKV 781



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 23/183 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 44  TSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMVRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           F+D+  +             R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGNISNQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                 +  + ++  +  IY+G     +  +     +D EV              P+   
Sbjct: 162 GLSKAVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENREVKGSMWHLRYPLADG 221

Query: 161 EEE 163
           E+ 
Sbjct: 222 EKT 224


>gi|50365171|ref|YP_053596.1| valyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827303|sp|Q6F1B1|SYV_MESFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50363727|gb|AAT75712.1| valyl tRNA synthetase [Mesoplasma florum L1]
          Length = 873

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 140/368 (38%), Gaps = 39/368 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++ ++ D +L   ES+ +     ER ++V+      + D ++SR+   W
Sbjct: 354 VEPYLSDQWFVKMDSFADMILKLQESNDKIKFFPERFDQVLKKWMENIHDWTISRQ-LWW 412

Query: 217 GIKI------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G +I                            + ++  W  +      T    +  +   
Sbjct: 413 GHRIPAWYNKEDKTKIYVGMEAPKDAENWIQDEDVLDTWFSSGLWPFATLMRGEGFESKY 472

Query: 253 AKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            K + P  + V G DI+      + +     +  +P    +         G K+SKSLGN
Sbjct: 473 FKEYLPNGVLVTGHDIIFSWVSRMIFQTIEYTGQIPFKDVLIHGLVRDEHGAKMSKSLGN 532

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            IDP++VI   G D+LR+ L+     G+D  Y    +K   N    N + N     +  +
Sbjct: 533 GIDPMDVIVNNGSDSLRFSLLTNSTPGQDIRYSDSKVKAAWN--FINKLWNASRYVLMNL 590

Query: 370 LKDY----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            +D+    +  I    +  E+D+ +L+  S+V +++   +       A   +   V    
Sbjct: 591 EEDFKPWEEQAILNSNSLNETDKWVLTEFSKVSKQVNYLIDKYEFAIAGKMLYDFVWNTY 650

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              Y +  K   +   NP          V +++ + I+L  ++P +   I+  L + +  
Sbjct: 651 CSWYIEFAK---VNLNNPKTKEATQQTIVYLLKNILIMLHPYLPFVTEHIYKTLDMKNSI 707

Query: 484 RCFQSLDQ 491
                 D+
Sbjct: 708 LEESWFDK 715



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 19/172 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K  I         + HIGHA++  + D + RF +L+G DVL+  G D  G      
Sbjct: 34  SKKPKFSIVLPPPNVTGKLHIGHAWDGSLQDAIIRFKKLNGFDVLYLPGMDHAGISTQVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHH 103
            +                        +  + +   R     L +++D  +   T +   +
Sbjct: 94  VEAKLREQGISRFELGREKFLEQAWKWKHEYAAIIRQQWSKLGLAFDYSMEKFTLDDDIN 153

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                ++    +KG IYKG     W  ++  A  N + +YK  +G  Y+ ++
Sbjct: 154 KIVTEIFVDFYNKGLIYKGKRIVNWDPMQKTAISNVEVIYKEVEGFMYHFKY 205


>gi|323499960|ref|ZP_08104918.1| leucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323314977|gb|EGA68030.1| leucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 857

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 97.2 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 112/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENDKGGKEWVAPTDVAVERDGKGRITSAKDNAGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V+              A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVNEHASKGAAEAVDASALSSDQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHISYEMW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  AD +N  + + D++
Sbjct: 772 AGLGEADIDNAAWPTFDEK 790


>gi|259507900|ref|ZP_05750800.1| valine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259164534|gb|EEW49088.1| valine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 904

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 118/361 (32%), Gaps = 47/361 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++            +    I P         +V   + D  +SR+   W
Sbjct: 373 IEPRLSLQWWVKVEELAKMSGDAVRAGDTTIHPKSLEPRYFDWVDD-MHDWCISRQ-LWW 430

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ D       K
Sbjct: 431 GHRIPIWYGPDGDVICVGPDEQAPEGYTQDPDVLDTWFSSALWPFSTMGWPDKTP-ELDK 489

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 490 FYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGTDGRPQVPFTDLFLHGLVRDE 549

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  +
Sbjct: 550 HGRKMSKSLGNGIDPMDWVDNYGADALRFTLARGANPGVDLPVGEDSAQSSRN--FATKL 607

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M        +P     T++D  IL     V   + + + N    +A  ++ 
Sbjct: 608 FN-ATRFALMNGA-VSEGLPERAELTDADRWILDRLEEVRGHVDDYLDNYQFAKANEELY 665

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    ++   +R      V   V+  L  LL   +P +   ++  
Sbjct: 666 HFAWNEFCDWYLEIAKVQIPREGVTERGRNTQQVLGHVLDALLRLLHPAMPFVTEVLWKA 725

Query: 477 L 477
           L
Sbjct: 726 L 726



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I         Q H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 50  SEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTK 109

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     K +  +     R + D +D S + F  T ++
Sbjct: 110 VEEMLKETEGKSRYDYSREEFIEKVWEWKKEYGGKIGEQMRAIGDSVDWSRERF--TLDE 167

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 168 GLSRAVQTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVY 210


>gi|114327597|ref|YP_744754.1| valyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327431|sp|Q0BTM1|SYV_GRABC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|114315771|gb|ABI61831.1| valyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 896

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 134/383 (34%), Gaps = 39/383 (10%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           +E  + +          + +    P++ +    +F   +      ++  ES     +P +
Sbjct: 346 EEMGFLETIETHTHHVPHGDRSGVPIEPLLTTQWFCNAAELAKPAVAAVESGDTRFVPKQ 405

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV------------------- 230
             N   ++++  ++   +SR+   WG  I     P   +YV                   
Sbjct: 406 WENTFFAWLRD-IQPWCISRQ-LWWGHRIPAWYAPDGSVYVAATAEEAQAAYGGSETLTQ 463

Query: 231 -------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
                  W  +     +T G+ ++     ++++P D+ + G DI+ F    +      + 
Sbjct: 464 DEDVLDTWFSSALWPFSTLGWPEDDSIL-SRYYPTDVLITGFDIIFFWVARMMMMGLHIQ 522

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P             +G+K+SKS GNVIDP+ +IE  G D +R+ +      G+D   
Sbjct: 523 KQVPFRDVYIHGLVRDERGQKMSKSKGNVIDPLALIEAHGADPMRFAICLLAGPGRDIKL 582

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++    +     + N         +K   G  P       S   IL+     ++  
Sbjct: 583 GPKRVEDA--SRFVTKLWNASVFCERNGVKPEPGFDPATVTLPLS-RWILASADDAIRAA 639

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + ++        A     V     D + +  KP  L    P+ A+ +  V   V+  + 
Sbjct: 640 TQALEAYRFDDYAATCYRFVWNTFCDWFVELAKPILLATDTPE-AAEIKAVAAHVLGVVL 698

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            LL   +P +   ++D      E
Sbjct: 699 RLLHPAMPYVTETLWDHFGYGPE 721



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 21/173 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA    + D L R+ R+ G DVL+  GTD  G       +    
Sbjct: 42  TIMIPPPNVTGSLHMGHALTFTLQDSLVRWRRMQGRDVLWQPGTDHAGIATQMVVERLLA 101

Query: 68  TT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
           +                    +  ++  N       L  S D      T ++      R 
Sbjct: 102 SEGSPGRREIGRDAFLDRVWRWKAESGGNITHQLRRLGASLDWGRERFTMDEGLSAAVRD 161

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           ++  +  +G IY+      +  + +   +D EV              P++  E
Sbjct: 162 VFVTLYRQGLIYRDRRLVNWDPQLQTAISDLEVESREVRGNLWHIRYPLEDGE 214


>gi|307822483|ref|ZP_07652714.1| leucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736087|gb|EFO06933.1| leucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 832

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++K Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  STQDKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    RD    L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AMQHGVHPADWTYSNIDYMRDQLKRLGFGYDWNRELATCDPSYYKWEQWFFLKLLEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D     +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTAPVNWCPHDMTVLANEQVIDG----CCWRCDTQVERKEIAQWFLKITAYADELLAS 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E+   +   ++           G
Sbjct: 206 LETLDGWPEQVKTMQANWIGRSEG 229



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 31/259 (11%)

Query: 232 IDALTNYLTTTGYLDNPDGSKA--KFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
               + Y       +         K+W P D ++ G +    H +Y   +         L
Sbjct: 511 FMESSWYFARFAGSNPDSMLDESAKYWLPVDHYIGGIEHAILHLLYARFYTKLLRDEGLL 570

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             + P  KK+ + G +L  G K+SKS GN +DP  +I++ G D +R F++      +   
Sbjct: 571 VCDEPF-KKLLTQGMVLKDGSKMSKSKGNTVDPQGLIDQYGADTVRLFIMFAAPPEQSLE 629

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +   G++          +  L  ++          +     A TE  + +       +Q+
Sbjct: 630 WSDSGVEGAF-----RFLKRLWKQAYQHCEAGGSTVPLDKQALTEEQQGVRRQLHLAIQK 684

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           + ++  +    +  +A  + L++ + ++            + D    V +   E +  + 
Sbjct: 685 VTDDFGRRYTFNTVIAANMELINTLSKF----------DDDSDNGKAVRH---EALEAIV 731

Query: 460 ILLQAFVPKLANKIFDILF 478
           ++L   VP + ++++  L 
Sbjct: 732 LMLSPIVPHICHQLWLDLG 750


>gi|298710134|emb|CBJ31846.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1036

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 130/396 (32%), Gaps = 67/396 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +    +F +      K L+  +     ILP  R N+V      G+ D  +SR+   W
Sbjct: 474 IEPLVSSQWFVKTEGMGAKALAAVQEKDIQILPE-RFNKVWHNWLDGIHDWCVSRQ-LWW 531

Query: 217 G--IKIPD---------------------------------DPQYIMYVWIDALTNYLTT 241
           G  I +                                   DP  ++  W  +      +
Sbjct: 532 GHQIPVWYASGHDGYFVARSEEDARKQATDAGVPTDVSLDRDPD-VLDTWFSSGLWPFAS 590

Query: 242 TGYLDNPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
            G+           + F+PA     G DI+ F    +      L+   P           
Sbjct: 591 VGWPQEEGNDGGDLSNFYPAACLETGYDIIFFWVARMVMMGIELTGKSPFDTIYLHGLVK 650

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SK+ GNV+DPI+ ++  G DALRY LV  +  G+D     + ++   N   AN
Sbjct: 651 DGNGMKMSKTKGNVVDPIDTMDSYGTDALRYTLVTGVTPGQDVPLSMERVQ--TNMFFAN 708

Query: 357 GIGNLVSRSVSMILKDYD------------GMIPTPGAFTESDESILSVCSRVLQEIREN 404
            + N   R +   LK                           +  I+S C R+++ +   
Sbjct: 709 KLWN-AGRFLLGNLKGLGEGEREALAVTGPMTAEELETLALPERYIVSKCHRLVEGVTTG 767

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWE-------LKKTNPDRASTVLYVTVEVI 455
           +Q   +  A   +   + +   D Y +A K            +    RA +     V V 
Sbjct: 768 LQGYDMGDAGKNIYEFLWDEYADWYIEASKTRIGSFAAGGDGEEGEARARSSRRTLVYVF 827

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                LL  F+P +   ++  L    E        +
Sbjct: 828 DTCLRLLHPFMPFITEALWQQLPRTGEALMVAPWPK 863



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 25/162 (15%)

Query: 4   REKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++K Y+      PN     H+GHA    + D+L R+HR+ G   LF  G D  G      
Sbjct: 154 KKKSYVVPMPP-PNVTGYLHMGHAMGTTLQDILTRYHRMRGEPTLFLPGQDHAGIATQML 212

Query: 62  AQNAGVTT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            + A                  KV+  +        R  R +    D S + F  T +  
Sbjct: 213 VERALAAEGIDRKEIGREAFLKKVWEWKEDKGGYIVRQMRRLGASADWSRERF--TLDPE 270

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                   + ++ +KG +Y+G Y   +S   +   +D EV  
Sbjct: 271 MSAAVTEAFVRLHEKGLVYRGDYMVNWSPSLQTAVSDLEVEY 312


>gi|323495447|ref|ZP_08100524.1| leucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310370|gb|EGA63557.1| leucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 857

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 111/319 (34%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVTVERDGKGRITSAKDDQGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 EHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V               A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHASKGAAEGVDTSALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  +D +N  + + D++
Sbjct: 772 VALGESDIDNAVWPTFDEK 790


>gi|169334959|ref|ZP_02862152.1| hypothetical protein ANASTE_01365 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257697|gb|EDS71663.1| hypothetical protein ANASTE_01365 [Anaerofustis stercorihominis DSM
           17244]
          Length = 1032

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 137/366 (37%), Gaps = 24/366 (6%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
                + ++ + N  E  K            P+     E         + +L+     + 
Sbjct: 423 WYPDFVGEKRFGNWIENVKDWAISRSRYWGTPLNIWRCECGHLHSVGSRKQLVEDAIENI 482

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
           +  + + R       +K      S++R               ++  W D+ +       Y
Sbjct: 483 DENIELHRPYVDEIHIKCPECGKSMTRVK------------DVIDCWFDSGSMPFAQQHY 530

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PA+    G D     F+++   +  +    P    + +   +   G+K
Sbjct: 531 PFENKEEFEEQFPANFICEGIDQTRGWFYSLLAISTFIMKKAPYKSVLVNDLILDANGQK 590

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +DP ++ ++ G DALR++L+          +D++GLK+ + +   N + N+ 
Sbjct: 591 MSKSKGNTVDPFDLFDKYGADALRWYLLYVSPAWTPTKFDEEGLKEVI-SKFFNTLKNVY 649

Query: 363 SRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +  V  +  + D + P           E D  ILS  + +++ +  +M+     +A+ ++
Sbjct: 650 TFFV--MYANTDNVDPREFFVEYKDRDEIDLWILSKYNNLVKAVTADMEINEHTKAVKKI 707

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              V+E   + Y    +         +    V   T EV+  L  L+  F P ++ +IF 
Sbjct: 708 QDFVNEDLSNWYIRRCRRRFWASELDNDKKAVYNTTYEVLIGLCKLIAPFAPFISEEIFR 767

Query: 476 ILFVAD 481
            L   +
Sbjct: 768 KLTGKE 773



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 49/161 (30%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N +P I H     + D + +F  + G  V    G D HG  +    + 
Sbjct: 39  ENFVFYEGPPTANGKPGIHHVIARTLKDSVCKFKNMQGYRVKRKAGWDTHGLPVEIEVEK 98

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 +  V      +RDM       I  D+   T +  + ++
Sbjct: 99  TLNMNGKGDIEKYGIAEFNKKCRESVFTYEALWRDMTKRTGYFIDLDNPYITLDNNYIES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              + K+  D G IY+G     Y  R        EV +G  
Sbjct: 159 VWWILKEFFDAGLIYEGHKILPYCPRCGTGLASHEVAQGYQ 199


>gi|261855975|ref|YP_003263258.1| valyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836444|gb|ACX96211.1| valyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 952

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 120/359 (33%), Gaps = 48/359 (13%)

Query: 162 EEGYFFRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            E +      + ++           +   I    +    V  G  +  +  K       +
Sbjct: 408 PENWSNTYYQWLENIQDWCISRQIWWGHRIPAWYDASGRVYVGRDEAEVRAKYDLENTVV 467

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
                 ++  W  +     +T G+  N     A F+P  + V G DI+ F    +     
Sbjct: 468 LTQENDVLDTWFSSALWPFSTLGWPQNTQ-ELAYFYPTSVLVTGFDIIFFWVARMVMMGK 526

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------- 319
               ++P  +          +G+K+SKS GNV+DPI++I+                    
Sbjct: 527 YFMGDVPFREVYVHGLIRDAQGQKMSKSKGNVLDPIDLIDGIDLESLVAKRTAGLMQPKM 586

Query: 320 ------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
                              G DA+R+        G+D  +D   ++     +  N + N 
Sbjct: 587 AAKIEKDTRKEFADGIPAFGTDAMRFTFAALATTGRDIRFDLGRIEG--YRNFCNKLWN- 643

Query: 362 VSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            SR V M  +D D  +   P   +++DE I+    +V  E+ ++  +     A   +   
Sbjct: 644 ASRFVMMQCEDQDTGLTDAPVTLSDADEWIIGRLQQVEAEVAKHFADYRFDLAAQTLYEF 703

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 D Y +  KP  LK  +           V V+  L  LL   +P +   I+  L
Sbjct: 704 TWNEYCDWYLEFTKP-ALKADDEAAQRGTRRTLVRVLEALLRLLHPIIPFITETIWQRL 761



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +     I         + H+GHA++  + D+L R HR+ G   L+  GTD  G       
Sbjct: 33  DAPNYCIMLPPPNVTGRLHMGHAFQDTLMDMLTRVHRMQGERTLWQPGTDHAGIATQMVV 92

Query: 63  Q--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                  T +V+  +       +   + +    D S + F  T +   
Sbjct: 93  ERQLEAEGKTRHDLGREAFTERVWQWKSESGGFITEQMKRLGASCDWSRERF--TMDDGL 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            D  R ++ ++ + G IY+G     +        +D EV    +  +      P+
Sbjct: 151 SDAVREVFVRLFEDGLIYRGKRLVNWDPVLHTAVSDLEVISEEETGHLWHLRYPL 205


>gi|254230581|ref|ZP_04923945.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151936897|gb|EDN55791.1| leucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 761

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 66/164 (40%), Gaps = 20/164 (12%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++++ G D +R F++          + + G++       AN     
Sbjct: 617 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKR 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V + V               A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 671 VWKLVKEHTAKGAAEAVDTAALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAIAAIMEL 730

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           ++            +L K   + A     +  E ++ + ++L  
Sbjct: 731 MN------------KLAKAPQESAQD-RAILDEALKAIVVMLYP 761


>gi|25028838|ref|NP_738892.1| valyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494124|dbj|BAC19092.1| putative valyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 939

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 118/361 (32%), Gaps = 47/361 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ ++            +    I P         +V   + D  +SR+   W
Sbjct: 408 IEPRLSLQWWVKVEELAKMSGDAVRAGDTTIHPKSLEPRYFDWVDD-MHDWCISRQ-LWW 465

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ D       K
Sbjct: 466 GHRIPIWYGPDGDVICVGPDEQAPEGYTQDPDVLDTWFSSALWPFSTMGWPDKTP-ELDK 524

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 525 FYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGTDGRPQVPFTDLFLHGLVRDE 584

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP++ ++  G DALR+ L R    G D    +D  +   N   A  +
Sbjct: 585 HGRKMSKSLGNGIDPMDWVDNYGADALRFTLARGANPGVDLPVGEDSAQSSRN--FATKL 642

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N  +R   M        +P     T++D  IL     V   + + + N    +A  ++ 
Sbjct: 643 FN-ATRFALMNGA-VSEGLPERAELTDADRWILDRLEEVRGHVDDYLDNYQFAKANEELY 700

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    ++   +R      V   V+  L  LL   +P +   ++  
Sbjct: 701 HFAWNEFCDWYLEIAKVQIPREGVTERGRNTQQVLGHVLDALLRLLHPAMPFVTEVLWKA 760

Query: 477 L 477
           L
Sbjct: 761 L 761



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I         Q H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 85  SEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTK 144

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     K +  +     R + D +D S + F  T ++
Sbjct: 145 VEEMLKETEGKSRYDYSREEFIEKVWEWKKEYGGKIGEQMRAIGDSVDWSRERF--TLDE 202

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 203 GLSRAVQTIFKKLYDSGMIYQANRLVNWSPVLETAVSDIEVVY 245


>gi|293393096|ref|ZP_06637411.1| valine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424242|gb|EFE97456.1| valine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 958

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 135/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 381 IEPMLTDQWYVRTAPLAKVAVEAVEQGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 438

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 439 GHRIPAWYDANGKVYVGRTEDEVRRDNNLGAEVALNQDEDVLDTWFSSGLWTFSTLGWPE 498

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 499 QTDALKTFH-PTSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFHTVYMTGLIRDD 557

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 558 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 617

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 618 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNAEDQDCGFSGGE 674

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE + N     A   +         D Y +  KP     
Sbjct: 675 KQLSLADRWILAEFNRTVKAYREALDNYRFDIAAGILYEFTWNQFCDWYLELTKPIVSNG 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  +R  T  +  + V+  L  L    +P +   I+  
Sbjct: 735 SEAERRGT-RHTLITVLEALLRLAHPIIPFITETIWQR 771



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 37  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 96

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 97  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 155 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 211


>gi|89069121|ref|ZP_01156494.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89045294|gb|EAR51360.1| valyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 991

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 9/273 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +    + T G+ +  D  K +++P D+ V G+DIL F    +      + 
Sbjct: 555 DEDVLDTWFSSGLWPIGTLGWPEQTDELK-RYFPTDVLVTGQDILFFWVARMMMMQLAVV 613

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P             KG+K+SK+ GNVIDP+E+I+E G D LR+      A G     
Sbjct: 614 GEAPFHTVYLHQLVRDEKGQKMSKTRGNVIDPLEIIDEYGADPLRFANASMAAIGGVLKL 673

Query: 342 DKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             D +K     +    + N    + ++ + +        P      +  I+   +R+ +E
Sbjct: 674 SVDRIKG--YRNFVTKLWNACRFAEMNGVFEAGAPPAAPPRPEATVNRWIIGETARIREE 731

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
               +     + A   + + V     D Y +  KP  +  T  +RA T       VI Q 
Sbjct: 732 TDAALAAYRFNDAANGLYAFVWGKVCDWYVEFSKPLLMDGTEEERAET-RATMAWVIDQC 790

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            ILL   +P +  +++  L   +         +
Sbjct: 791 LILLHPIMPFVTEELWGTLAQRERMLALTDWPE 823



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 58/196 (29%), Gaps = 34/196 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+HR+ G D L+  G D  G       +    
Sbjct: 39  CVMIPPPNVTGALHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQLQVEKLLA 98

Query: 68  TT-----------------KVFVDQNSRNFRDMADVLDISYD---------------DFI 95
           +                    +  Q      +    L  S D                  
Sbjct: 99  SEGNEGRRELGREKFLEKVWDWKGQYGSTIVNQLKRLGSSCDWSRNAFTMAGAPGDPRTG 158

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++ ++ DKG IY+G     +    E   +D EV       +      
Sbjct: 159 HENSPDFHDAVIKVFVEMYDKGLIYRGKRLVNWDPHFETAISDLEVENVEVDGHMWHFRY 218

Query: 156 PVQWMEEEGYFFRLSA 171
           P+   E   Y  R   
Sbjct: 219 PLAGGETYTYVERDED 234


>gi|13474936|ref|NP_106506.1| tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14025692|dbj|BAB52292.1| mlr5926 [Mesorhizobium loti MAFF303099]
          Length = 581

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 98/531 (18%), Positives = 173/531 (32%), Gaps = 42/531 (7%)

Query: 4   REKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R  +++ +    PN   H+GH     + ADV  RF R+ G++    TG+D++   +A  A
Sbjct: 34  RGPIFVFSTPPTPNGDLHLGHLSGPYLGADVYTRFLRMKGVEAYHLTGSDDYQSYVATRA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYK 121
                T        +   R    +LD     F+ T  +  + +     ++ +     +  
Sbjct: 94  DAEQSTPGKVARHYADEIRATLALLDCEVHSFLPTLGDSAYAEFQAACFRSLLSSTAVDL 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +      Y  + +V         +A  N  +          L A + +  +   
Sbjct: 154 RQSPALFDAVTGDYLYEPDVSGLCPDCGGSAGGNICEECGAPNLCHDLDAVRSRHSAEAP 213

Query: 182 SHPEFILPIERRNEVISFVKSGL------------KDLSLSRKTF--------DWGIKIP 221
                  P          +   L                  R  F        DWG+   
Sbjct: 214 VVGFMRRPELALERCYVNIDRHLRASGAPVRIMDLFARLRQRGDFSVPIIHPSDWGLPAE 273

Query: 222 DDPQYIMYVWIDALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
             P  + +VW +    +L                   +K W   +H  G D   +HA+ +
Sbjct: 274 GFPGQVTWVWPEMAFGFLYNIQTLATSLGRHWNAALPSKDWQI-VHFFGFDNSFYHALLY 332

Query: 276 PAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           PA           ++  H   F L  G+K S S  + +   EV+ +  VD +R  L    
Sbjct: 333 PALYAEVFSHWTPRIRYHVNEFYLLDGQKFSTSRSHAVWGKEVLGQKTVDVVRLHLGLTR 392

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G+   +  D L++  N        N +      I +D+ G +P  G +  +D +    
Sbjct: 393 PEGERTNFTLDALRRTENEVFQGIWLNWLDALHGEIKQDFGGCVPDAGDWAPADRAFFGR 452

Query: 394 CSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVL 448
                  +          + RA AQ    VS+   Y    D +    L    P R  T L
Sbjct: 453 IEIHRAAMERAYSDDGFSVRRAAAQACDFVSDCVVYRRAQDYEAARRLY---PARTRTSL 509

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFM 498
            +       LA  L   +P+ A+ +   +  V+ E   + +  +RL PG  
Sbjct: 510 ALQTTAAAILAQTLAPLMPRFASTLARGIDGVSTE--TWPTSVRRLAPGTT 558


>gi|308273587|emb|CBX30189.1| Leucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 835

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +K Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     
Sbjct: 1   MSPGKKYYLLEMFPYPSGKIHMGHVRNYTIGDVVARYKRMQGFNVLHPMGWDAFGMPAEN 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA         +  +N    R     +  SY  D  I T +  ++   + L+ K+ +KGD
Sbjct: 61  AAIANKTHPAAWTYENIDYMRKQLKRMGFSYDWDREITTCKPEYYRWEQWLFLKMYEKGD 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  G            V+  +   +FFR++ Y + LL 
Sbjct: 121 AYRKESFVNWCDSCQTVLANEQVEAGM----CWRCGKQVRQKKLWQWFFRITDYAEDLLL 176

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
           + +    +   +    +      +G
Sbjct: 177 HCDMLAGWPEKVTLMQKNWIGKSTG 201



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 95/295 (32%), Gaps = 62/295 (21%)

Query: 232 IDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFHAIYWPAF-------- 278
               + Y       D   G   K     + P D ++ G +    H +Y   F        
Sbjct: 473 FVESSWYFERYCSPDYTKGLFDKTAVDYWMPVDQYIGGVEHAILHLLYSRYFTRVLKDLG 532

Query: 279 -----------------------LLSANLPLPKKVF-----------SHGFILHKGEKIS 304
                                          P++V             H  ++ + EK+S
Sbjct: 533 LVECKEPFTRLLTQGMVCKETVSCPDHGYLFPQEVIEETEKRTCSKCGHEVVVGRVEKMS 592

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  NVIDP  ++E  G D  R F +      +D  + + G++          +  LV+ 
Sbjct: 593 KSKKNVIDPNLLLERYGADTTRLFCLFAAPPERDLEWSEQGVEGGYR--FLTRVWRLVN- 649

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSE 423
           +   ++ +       P         +     + + ++  +++N    + A++ V+ LV+ 
Sbjct: 650 TWIDVIGNTVPFDGEPELLEGDLRELYRKTHQTISKVTNDIENRFHFNTAISAVMELVNI 709

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +               N + A     V    +  + +LL   VP  + ++++ + 
Sbjct: 710 I-----------YAMDNIEDAPEKPGVIRFAVESIILLLSPIVPHFSEELWEAIG 753


>gi|167646113|ref|YP_001683776.1| valyl-tRNA synthetase [Caulobacter sp. K31]
 gi|167348543|gb|ABZ71278.1| valyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 907

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 116/356 (32%), Gaps = 44/356 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L   E+      P         +++  ++   +SR+   W
Sbjct: 372 IEPYLTDQWYVDAKTLAQPALKAVENGDTVFEPKNWEKTYFEWLR-NIEPWCVSRQ-LWW 429

Query: 217 G--IKIPDDPQY-------------------------------IMYVWIDALTNYLTTTG 243
           G  I     P                                 ++  W  +     +T G
Sbjct: 430 GHRIPAWFGPDGHIFVEETEEEALAAAILHYGDEAPVLKRDEDVLDTWFSSALWPFSTLG 489

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +  +   AKF+P    V G DI+ F    +          +P  +   +      KG 
Sbjct: 490 WPEKTE-DLAKFYPTSTLVTGFDIIFFWVARMMMMGIHFMGEVPFKQVFINALVRDEKGA 548

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP+ +I+E+G DA+R+ +       +D    K  ++     +    + N 
Sbjct: 549 KMSKSKGNVLDPLVLIDELGCDAVRFTMTAMSGQARDIKLSKQRIEG--YRNFGTKLWN- 605

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            SR   M                  ++ I     +   E+   ++      A   +   +
Sbjct: 606 ASRFAQMNECVRVEGFDPSTVQQPINKWIRGETVKTAAEVTRALEAPSFDAAATALYRFI 665

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  KP  L   + +  +         +  +  LL   +P +  +++D
Sbjct: 666 WNVFCDWYLELAKP-ILNGDDAEAKAETRATAAWALDVILKLLHPVMPFITEELWD 720



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 24/173 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           HIGHA    + DVL RFHR+ G   L+  GTD  G       + 
Sbjct: 34  ESFTIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKSALWLPGTDHAGIATQMVVER 93

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +       +   R +    D S + F  T ++   
Sbjct: 94  QLAAAGNIGRREMGREAFVEKVWEWKAESGGAITNQLRRLGASCDWSRERF--TLDEGLS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHN 155
              R ++ ++     +Y+      +  + +   +D EV +   DG Y++  + 
Sbjct: 152 AAVRKVFVQLYKDKLLYRDKRLVNWDPQFQTAISDLEVEQKEVDGFYWHFAYT 204


>gi|330828603|ref|YP_004391555.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565]
 gi|328803739|gb|AEB48938.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565]
          Length = 858

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V              PV+  E   +F +++ Y ++LLS  
Sbjct: 151 KKTSSVNWCPNDMTVLANEQVVDN----CCWRCDTPVEQKEIPQWFIKITDYAEELLSDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 71/182 (39%), Gaps = 21/182 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  ++E  G D +R F++          +   G++       A      
Sbjct: 618 KMSKSKNNGIDPQLMVERYGADTVRLFMMFASPAEMTLEWSDSGVEG------AQRFLRR 671

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R     +           A T   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 672 LWRVTFEHVSGGSVAALDVAALTNEQKAVRRELHKTIAKVSDDVGRRQTFNTAIAAIMEL 731

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ + +         L     DRA     +  E +  + ++L    P +  +++ +L   
Sbjct: 732 MNNLAK---------LGNDEQDRA-----LMQEALEAVVVMLYPITPHIGFELWKMLGKG 777

Query: 481 DE 482
           D+
Sbjct: 778 DD 779


>gi|328472490|gb|EGF43353.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 857

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 113/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFIL------------------------------------HKGE-- 301
           ++++ P  K++   G +L                                    ++G   
Sbjct: 552 VTSDEPF-KQLLCQGMVLADAFYFENEKGGKEWVAPTDVAVERDGKGRIISAKDNEGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 THSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V    +          A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVKEHAEKGAAEAVDTAALSGEQKALRRDVHKTIAKVTDDIARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++ +++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVTMLYPITPHISYELW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L  ++ +N  + + D++
Sbjct: 772 TALGESNIDNAAWPTFDEK 790


>gi|117619872|ref|YP_857738.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117561279|gb|ABK38227.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 910

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 82  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 141

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 142 IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 201

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V              PV+  E   +F +++ Y ++LL+  
Sbjct: 202 KKTSSVNWCPNDMTVLANEQVVDN----CCWRCDTPVEQKEIPQWFIKITDYAEELLNDI 257

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 258 DNLEGWPEMVKTMQRNWIGRSEG 280



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 75/194 (38%), Gaps = 23/194 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  ++E  G D +R F++          +   G++       A      
Sbjct: 670 KMSKSKNNGIDPQLMVERYGADTVRLFMMFASPAEMTLEWSDSGVEG------AQRFLRR 723

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R     +           A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 724 LWRITFEHVSAGVAPALNVAALSVDQKAVRRELHKTIAKVSDDVGRRQTFNTAIAAIMEL 783

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ + +         L     DRA     +  E +  + ++L    P +  +++ +L   
Sbjct: 784 MNNLAK---------LGSDEQDRA-----LMQEALEAVVVMLYPITPHIGFELWKMLGKG 829

Query: 481 D--ENRCFQSLDQR 492
           D  ++  +   D+ 
Sbjct: 830 DDVDHATWPVADEA 843


>gi|78780160|ref|YP_398272.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78713659|gb|ABB50836.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 918

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 67/341 (19%), Positives = 128/341 (37%), Gaps = 14/341 (4%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            W+E    +                  +       +N       +    L  + K F   
Sbjct: 403 DWLENINDWCISRQLWWGHQIPVWYVLDESQDSIEQNTPYVVASNEEDALIKANKKFGLN 462

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           IK+  D   ++  W  +     +T G+ +  D    K++P  + V G DI+ F    +  
Sbjct: 463 IKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYPNSVLVTGFDIIFFWVARMTM 521

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA- 334
                + N+P               +K+SKS GN IDPI +IE+ G DALR+ L+RE+A 
Sbjct: 522 MGNTFTNNIPFRDVYIHGLVRDENNKKMSKSSGNGIDPILLIEKYGSDALRFALIREVAG 581

Query: 335 CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSV--SMILKDYDGMIPTPGAFTESD 387
            G+D   D D  K        + + AN + N     +       +Y        +    D
Sbjct: 582 AGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVLINKTSNNNYSLNESDEDSLELCD 641

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
           + ILS  ++V  ++   ++   +  +   +         D Y +  K     K   +R  
Sbjct: 642 KWILSKLNQVNIKVAALLKEYKLGESAKLLYEFTWNDFCDWYVEFAKQRFNNKEIKNRQL 701

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +   V ++V+  + +++  F+P +  +++  L +  +    
Sbjct: 702 S-EKVLIKVLNDILVMIHPFMPHITEELWHALQLKPDQSLL 741



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I           H+GHA+   + DV+ RF RL G +VL   GTD     +    
Sbjct: 39  DGEPFCIVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTIL 98

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                   + +Q+          +  S D      T +++ ++
Sbjct: 99  EKQLKSEGKTSDDIGRDEFLKRAWNWKEQSGGRIVSQLKRIGYSVDWTRERFTLDQKLNE 158

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  +  K  IY G Y   +    ++  +D EV       +      P+
Sbjct: 159 AVVEAFNILYKKNLIYSGEYLVNWCPESQSAVSDLEVEMQEVKGHLWHFKYPL 211


>gi|53803851|ref|YP_114527.1| valyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81823617|sp|Q606C1|SYV_METCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53757612|gb|AAU91903.1| valyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 921

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 123/390 (31%), Gaps = 79/390 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F +        +   E      +P    N    ++   ++D  +SR+   W
Sbjct: 350 VEPFLTDQWFVKAGPLAGPAIKAVEEGRIRFVPENWSNTYYQWM-YNIQDWCISRQ-IWW 407

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +  +YV                            W  +     +T G+ +
Sbjct: 408 GHRIPAWYDGEGRVYVGRSEEEVRAKHGLDASIPLRQDEDVLDTWFSSALWPFSTLGWPE 467

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                   F+P  + V G DI+ F    +         ++P  +          +G+K+S
Sbjct: 468 RKP-ELDTFYPTSVLVTGFDIIFFWVARMIMMGLKFMGDVPFREVYIHGLVRDAEGQKMS 526

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNV+DPI++I                                        G DALR+
Sbjct: 527 KSKGNVLDPIDLIDGISLEDLVAKRTQGLMQPQMAARIEKRTRQDFPEGIPSYGTDALRF 586

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
                 + G+D  +D   ++     +  N + N  +R V M  +  D        +++  
Sbjct: 587 TFASLASTGRDIRFDLKRVEG--CRNFCNKLWN-AARYVLMNTEGQDCGSGGGACSYSLP 643

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  I S     +  + E M       A   +   V     D Y +  K   L+  N    
Sbjct: 644 DRWIRSRFQAAVGTVTEAMGQYRFDLAAQALYEFVWNEYCDWYLELAKV-VLQSGNEAER 702

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                    V+  L  L   F+P +  +I+
Sbjct: 703 RGTRQTLAGVLESLLRLAHPFMPFITEEIW 732



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
              I  PN     H+GHA++  + DVL R+HR+ G   L+  GTD  G            
Sbjct: 34  CIMIPPPNVTGSLHMGHAFQDTVMDVLIRYHRMKGDRTLWQAGTDHAGIATQMVVERQLA 93

Query: 60  -----------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +A        K       +R  R M   LD S + F  T ++      R
Sbjct: 94  GVGQTRHDLGREAFIERVWQWKETSGGTITRQLRRMGASLDWSRERF--TLDEGLSRAVR 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 152 EVFVRLYEEGLIYRGKRLVNWDPVLHTAVSDLEVISEEEQGHLWHMRYPL 201


>gi|110633924|ref|YP_674132.1| valyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284908|gb|ABG62967.1| valyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 926

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 123/358 (34%), Gaps = 25/358 (6%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                 +     +   + +      +     H    W   +G  F     +  L +  + 
Sbjct: 405 TVFVPKNWEKTYFDWMENIQPWCISRQLWWGHQIPAWYGPDGQVFVEKDEEAALEAAIQH 464

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
           +     P +               +    + F  G  +  D   ++  W  +     +T 
Sbjct: 465 YLSHEGPWKAW-------------VEEKLENFQPGEILTRDED-VLDTWFSSALWPFSTL 510

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK- 299
           G+ +      A ++P  + V G DI+ F    +       +   P    V+ H  +  K 
Sbjct: 511 GWPEKTK-ELATYYPTSVLVTGFDIIFFWVARMMMMGLHFTGREPF-HTVYVHALVRDKN 568

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP+E+I++ G DALR+ L    A G+D   D   +      +    + 
Sbjct: 569 GAKMSKSKGNVIDPLELIDQYGADALRFTLAIMAAQGRDVKLDPARVAG--YRNFGTKLW 626

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   M     D       A    +  IL+  +R  + I E + +   + A      
Sbjct: 627 N-ATRFAQMNGVARDANFQPEQAKLAVNRWILTELTRASRAITEGITSYRFNDAAGGAYR 685

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V     D Y +  KP      +    +        V+ ++  LL   +P +  +++ 
Sbjct: 686 FVWSLFCDWYLELLKP-VFAGDDETAKAEARACVAYVLDEIYKLLHPMMPFITEELWS 742



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 56/176 (31%), Gaps = 22/176 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  EAFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTK------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHD 104
             +  +              V +             + +    D S + F  T ++    
Sbjct: 96  QLMERQIHRRDLGRESFVEKVWEWKEQSGGTILTQLKRLGASCDWSRERF--TMDEGLSS 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
               ++  +  +G IYK      +  +     +D EV +            P++ M
Sbjct: 154 AVIEVFVSLYKQGLIYKDKRLVNWDPKLLTAISDVEVEQIEIKGNLWHLRYPIEGM 209


>gi|220935312|ref|YP_002514211.1| valyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996622|gb|ACL73224.1| valyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 920

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 129/393 (32%), Gaps = 76/393 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++ +     +  ++  E      +P    ++        ++D  +SR+   W
Sbjct: 348 IEPFLTDQWYVKAGPLAEPAIAAVEDGRIRFVPENW-SKTYFEWMRNIEDWCISRQ-IWW 405

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 406 GHRIPAWYDADGNIYVAHDEAEVRKKYKLGAEVALTQDPDVLDTWFSSALWPFSTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 ++++P ++ V G DI+ F    +         ++P  +   +      +G+K+S
Sbjct: 466 KTP-ELSRYYPTNVLVTGFDIIFFWVARMIMMGLKFMDDVPFREVYITGLIRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNV+DPI++I                                        G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGITLDALLEKRTQGLMQPQMAKKIDKATRKQFPDGIPPFGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L    + G+D  +D   ++     +  N + N     +        G+   P   + +D
Sbjct: 585 TLASLASTGRDIKFDLGRIEG--YRNFCNKLWNAARYVLMNTEGQDTGLGNEPVELSLAD 642

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
             I S     + ++R N+       A   +         D Y +  KP     ++ ++  
Sbjct: 643 RWIQSRLQGAINQVRGNLDQYRFDLAAQALYEFTWHDYCDWYLELSKPVLTGDSSAEQQR 702

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 V V+  L  L+   +P +   I+  + 
Sbjct: 703 GTRQTLVRVLDALLRLMHPIMPFITEAIWRQVG 735



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA++  + D L R+HR+ G D L+  GTD  G       +    
Sbjct: 34  CIMLPPPNVTGTLHMGHAFQHTLMDTLMRYHRMSGDDALWQGGTDHAGIATQMVVERQLA 93

Query: 68  TTK------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
           T K              V Q             R + + +D   + F  T ++      R
Sbjct: 94  TDKVSRHDLGREKFLERVWQWKEQSGGTITRQMRRLGNSIDWERERF--TMDEGLSRAVR 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ D+G IY+G     +        +D EV    +         P+
Sbjct: 152 EVFVRLHDEGLIYRGKRLVNWDPVLHTAVSDLEVINEEEQGSLWHLRYPL 201


>gi|163843215|ref|YP_001627619.1| valyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673938|gb|ABY38049.1| valyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 910

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGIDHAGIATQMVLER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|253699409|ref|YP_003020598.1| leucyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511544|sp|C6E100|SYL_GEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251774259|gb|ACT16840.1| leucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 824

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  TRKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     L +SY  D  + T +  ++   + ++ ++  KG  Y
Sbjct: 91  IQHKSHPAKWTYENIAYMRGQLKTLGLSYDWDRELATCDLDYYKWEQRIFLEMYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +  + E    +++V  G          +PV+  E E + FR++ Y  +LL   
Sbjct: 151 KKSSAVNWCPKCETVLANEQVEDG----CCWRCDSPVRQKELEQWSFRITNYAQELLDDT 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
                +   +           +G
Sbjct: 207 YKLTGWPERVLTMQRNWIGRSTG 229



 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 99/266 (37%), Gaps = 28/266 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y +        D  K + W P D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFVQSSWYFLRYCSPKFSAGPLDREKVEAWMPVDQYIGGIEHAVLHLLYARFFTKV 553

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                  + + P    + + G ++  G K+SKS GNV+DP  +IE  G D  R F +   
Sbjct: 554 LRDLGYCNVDEPF-SNLLTQGMVIKDGAKMSKSKGNVVDPNALIERYGADTARLFSLFAA 612

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +   G+         N +  LV   + +I    +     P +     + +   
Sbjct: 613 PPEKDLDWSDQGVDGSYR--FLNRVWRLVYDVLPVIG---EAGAVNPDSLGAEAKKLRRA 667

Query: 394 CSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + ++++ E+++     + A+A V+ LV+       A       K  P+  + V     
Sbjct: 668 VHKTIKKVSEDVEERFHFNTAIAAVMELVNA----IQAFA----AKDAPENVAVVR---- 715

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E +  +  LL  FVP  A +++  L 
Sbjct: 716 EAVESVVRLLAPFVPHFAEELWSQLG 741


>gi|254701707|ref|ZP_05163535.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752258|ref|ZP_05995967.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261742011|gb|EEY29937.1| valyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 910

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESRQIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|83814107|ref|YP_446150.1| valyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294508074|ref|YP_003572132.1| Valyl-tRNA synthetase [Salinibacter ruber M8]
 gi|83755501|gb|ABC43614.1| valyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294344402|emb|CBH25180.1| Valyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 901

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 134/357 (37%), Gaps = 48/357 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +    +F  +    +  +           P    NE   +++  ++D  +SR+   W
Sbjct: 365 IEPLISRQWFVEMEPLAEPAIEAVREGEIEFFPDRWANEYFRWME-NIRDWCISRQ-LWW 422

Query: 217 GIKIPD----------DPQY------------------IMYVWIDALTNYLTTTGYLDNP 248
           G +IP           DP+                   ++  W  +      T G+ +  
Sbjct: 423 GHRIPVWYYTDEHGEADPEQGYVVSIDQPEDGMVQETDVLDTWFSSWLWPFATLGWPEET 482

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D    KF+P D+ V G DIL F    +    +  +   P      +      +G  +SKS
Sbjct: 483 D-DLEKFYPTDVLVSGYDILFFWIARMIMAGYEFTGRPPFKNVFITGMVKDAQGRWMSKS 541

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN IDP+E++++ G DA R+ L    A G+D        +  +  + AN I N  +   
Sbjct: 542 LGNGIDPLEMVDQYGADATRFTLTLLCAQGQDIKLAPSKFE--MGRNFANKIWNAFNVFG 599

Query: 367 SMILKDYDGMIPTP-------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + +D  G+                 ++ +L      +Q++ +++    ++    +V  
Sbjct: 600 QFMDRDDAGVPVRDYQRERSFEELELVEQWMLHRLHTAIQDVEDSLDRYRLNEIAERVYD 659

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +      D Y +  KP   ++   D+    + +  E+   L  LL   +P +  +++
Sbjct: 660 VFWRDYCDWYLELIKPPYGEEMEADK----IALAAEIYETLLKLLHPLMPFITEELW 712



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 23/188 (12%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA--- 65
           I         + HIGHA +  I D L R HR+ G + L+  G D  G     A ++    
Sbjct: 51  IMMPPPNVTGRLHIGHALQDSIQDALTRIHRMKGDETLWMPGLDHAGIATQNAVEDDLRE 110

Query: 66  ------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                                 + + D      R + D  D     F  T ++      +
Sbjct: 111 AEGKTRHDLGREAFVERVRAWKEEYGDLILDQKRTLGDSCDWGRQRF--TMDEGFTRAVQ 168

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            ++ ++ ++G IY+G Y   +   +E   +D+EV       +      P+   E+E    
Sbjct: 169 EVFVQLHEEGLIYRGDYLVNWDPENETALSDEEVENEEREGHLWHVQYPLVGAEDESLTI 228

Query: 168 RLSAYQDK 175
             +  +  
Sbjct: 229 ATTRPETM 236


>gi|303232750|ref|ZP_07319435.1| valine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481236|gb|EFL44311.1| valine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 894

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 72/415 (17%), Positives = 138/415 (33%), Gaps = 44/415 (10%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             H   +  + +    G     C +      DE    D          +       ++  
Sbjct: 299 DEHAHVQPGYGEF--SGMDRDECRAAIVRWFDEHGLLDHVEELNHSVMHCYRCDTALEPW 356

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             E +F  +   ++  L   +       P +R  +        LKD  +SR+   WG +I
Sbjct: 357 LSEQWFVAVDKLKEPALKVVDDGDVVFHP-QRWTQTYRTWMENLKDWCISRQ-LWWGHRI 414

Query: 221 PD---------------------------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           P                              + ++  W  +      T G+    D    
Sbjct: 415 PVFYCTSCSWKDALPQDVDVCPQCGSAVVQDENVLDTWFSSQLWTFATQGWPLQTDELSQ 474

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
              P  + V  +DI+      +   +   + ++P          +   G ++SKS GN +
Sbjct: 475 HH-PTKVLVTARDIIALWVARMIMSSLYFTGDIPFHDVFIYATILAKDGSRMSKSKGNGV 533

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYD------KDGLKKRVNADLANGIGNLVSRS 365
           DP+E+I++ G DA+RY L+  I   +D  +D         LK+    + A      +  +
Sbjct: 534 DPMELIQKYGADAMRYNLLTLITGNQDVKFDAVIDKKTKKLKESPRTEQARAFVTKIWNA 593

Query: 366 VSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
              +  + +G IP  P   T  D  +LS  +R++      +++         + +     
Sbjct: 594 SRFVQMNLNGYIPGDPKVRTAEDAWMLSRLARMVVRATSQLEHYEFGDYARDIQTFFRNE 653

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  K   L  +  +    V    V V+     L+   +P +  KI+  L
Sbjct: 654 VCDWYIELCKSRLLHGSAEETLE-VQRNLVFVLDTSLRLMHPVMPHVTEKIWQSL 707



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 52/169 (30%), Gaps = 20/169 (11%)

Query: 9   ISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            +  I  PN     H+GHA +  I D   R++R+ G    +  GTD  G           
Sbjct: 36  CTVVIPPPNVTGILHMGHAMDDTIQDTFVRYNRMRGRSTRWILGTDHAGIATQTKVDKKL 95

Query: 67  VT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
            +                   +  +      +    +   I + D   T    +    R 
Sbjct: 96  KSEGISRLAIGREKFLDACWDWTREYGGTIVNQIKRMGCSIDFSDPKFTMSDEYAHAVRT 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ K    G IY+G     +  +     +DDE     +  +      P+
Sbjct: 156 VFVKWYHDGLIYRGKRIVNWCPQCCTAISDDEAEYRDEKGHLWYMRYPL 204


>gi|114764911|ref|ZP_01444084.1| valyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114542623|gb|EAU45647.1| valyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 1025

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 113/292 (38%), Gaps = 16/292 (5%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I +  DP  ++  W  +    + T G+ +       +++P  + V G+DIL F    +  
Sbjct: 587 IPVFRDPD-VLDTWFSSGLWPIGTLGWPEKTA-ELERYFPTSVLVTGQDILFFWVARMMM 644

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   +P             KG+K+SKSLGNV+DP+E+I+E G DALR+      + 
Sbjct: 645 MQLAVVDEIPFRDVYLHGLVRDAKGKKMSKSLGNVVDPLEIIDEYGADALRFTNAAMASL 704

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G     D   +      +    + N    +         G  P P A    ++ IL   +
Sbjct: 705 GGVLKLDMQRIAG--YRNFGTKLWNAARFAEMNGAVGLGGDRPVPQAT--VNKWILGETA 760

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           RV + +   + +   + A   + + V     D Y +  KP  L+  +    +        
Sbjct: 761 RVRETVDAALADYRFNDAALSLYAFVWGVVCDWYVEFSKP-LLQGEDEAAKAETQATMSW 819

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           VI Q  ILL   +P +  +++  L         + L     P +   +  DP
Sbjct: 820 VIDQCLILLHPIMPFITEELWGTLG-----ERSKMLVHGDWPSYTTEELLDP 866



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 30/183 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ESFCIMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMVVER 95

Query: 64  ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK-- 100
                              T K++  +           + +    D S + F  +  +  
Sbjct: 96  ELAKDASNATRREMGREAFTAKIWEWKQQSGGTIINQLKRLGASCDWSRNAFTMSGAEGA 155

Query: 101 ------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++  + +KG IY+G     +    E   +D EV       +     
Sbjct: 156 PAGEEGNFHDAVIKVFVDMYEKGLIYRGKRLVNWDPHFETAISDLEVENIEVPGHMWHFK 215

Query: 155 NPV 157
            P+
Sbjct: 216 YPL 218


>gi|23501832|ref|NP_697959.1| valyl-tRNA synthetase [Brucella suis 1330]
 gi|254704249|ref|ZP_05166077.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754917|ref|ZP_05998626.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|81752694|sp|Q8G0Y3|SYV_BRUSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23347767|gb|AAN29874.1| valyl-tRNA synthetase [Brucella suis 1330]
 gi|261744670|gb|EEY32596.1| valyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 910

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGIDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|94967163|ref|YP_589211.1| valyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94549213|gb|ABF39137.1| valyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 929

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 131/423 (30%), Gaps = 52/423 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G   +        L  + +     V K  +    +     +  +E+    F    Y+   
Sbjct: 347 GKCSRCKTIVEPRLSTQWFVA---VNKKPNHGGMSWAEAAIAAVEQGHIRFTPENYKPIF 403

Query: 177 LSY------YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           L +      +    +               K      +   +    G    D    ++  
Sbjct: 404 LQWMRNIYDWCISRQLWWGHRIPAWYCEECKEVTVARTTPEECSKCGGTKLDQDNDVLDT 463

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN----- 283
           W  +     TT G+ +        F+P  L +   DIL F    +        +      
Sbjct: 464 WFSSGMLPFTTLGWPEKTR-DLEVFYPTSLLLTAFDILFFWVARMIMMGCYFMSGPNRPT 522

Query: 284 -------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                        +P  +          + +K+SK+ GNV+DPI+V+ + G DA+R+ L 
Sbjct: 523 EIAGGKENELKESIPFKEVYIHSLVRDAERQKMSKTKGNVVDPIDVLNKFGTDAVRFTLA 582

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI----------LKDYDGMIPTP 380
              A G D  + +   +       AN I N        +          L+++    P  
Sbjct: 583 SMAAPGTDIAFSESRTES--YRSFANKIWNAARFIFMNVDRAAEKGVWSLEEFAKTQPKG 640

Query: 381 GAF------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
                    T  D  ILS  ++V +E+ E ++    H A   V         D Y +  K
Sbjct: 641 EGLPGFSTETLEDRWILSRFNKVAREVSEALETYRFHEASHVVYHFFWGEFCDWYIELTK 700

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P    + +   A       + V      LL  F+P +  +I+  ++         SL + 
Sbjct: 701 PRL--EADEATARKTFANLLAVFEGALRLLSPFMPFITEEIWHAIYDGKPPLKSISLAEY 758

Query: 493 LKP 495
            K 
Sbjct: 759 PKA 761



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 53/176 (30%), Gaps = 18/176 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +         + H+GH       D++ R+ R+ G   L+  GTD  G       + 
Sbjct: 40  PTFTLLLPPPNVTGRLHMGHMLNHTEMDIIIRWRRMRGERTLWLPGTDHAGIATQMMVER 99

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
              T                   +  +           +   + +D    T +       
Sbjct: 100 QLATEGKNRREIGREKFLERVWEWKKEYGGAITSQMRRIGDSVDWDREYFTMDDHLSVAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           R  + ++ ++G +Y+G Y   +  R     +D EV              PV+  +E
Sbjct: 160 REAFVRLYEQGLVYRGKYIVNWCPRCGTAISDLEVAHEETQGKLWEIRYPVEGTDE 215


>gi|307263538|ref|ZP_07545153.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|306871181|gb|EFN02910.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 861

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T  + ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRQEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V++G           PV+  E   +F +++ Y ++LL++ 
Sbjct: 151 KKTSTVNWCPNDATVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLTHL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 78/300 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +             A +++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +      P E      D+A     V  E +  +  +L    P +  +++  L   D
Sbjct: 734 NKLTK-----APLE---NEQDKA-----VMAEALSAVVRMLYPITPHICFELWQALGNND 780


>gi|89074967|ref|ZP_01161412.1| leucyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89049206|gb|EAR54770.1| leucyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 857

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDLTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 106/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 552 VTSDEPFKQLLCQGMVLADAFFYTTEKGGKEWVAPTDVIVERDGKGRITSAVDTDGRDVD 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               A T   +++     + + ++ +++  +   + A+A
Sbjct: 666 RFLKRVWKLVREHTAKGTAEAVDVSALTGVQKALRRDIHKTIAKVSDDIGRRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K + +       +  E ++ +  +L    P +  +++ 
Sbjct: 726 AIMELMN------------KLAKASQESVQD-RAILDEALKAIVTMLYPITPHICFEMWA 772

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L   D +N  +   D++
Sbjct: 773 ALGETDIDNAQWPQADEK 790


>gi|149187033|ref|ZP_01865340.1| valyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148829322|gb|EDL47766.1| valyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 902

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 126/351 (35%), Gaps = 46/351 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +   +     I+P        ++++  ++   +SR+   W
Sbjct: 386 IEPWLTDQWYVDAEKLAKAPIEAVKDGTIEIVPKSWEKTFFNWME-NIQPWCVSRQ-LWW 443

Query: 217 G--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLDNP 248
           G  I    D +                           ++  W  +      T G+ D  
Sbjct: 444 GHRIPAWYDAEGKAYVAMTEDEAQAQAGDGVALTRDADVLDTWFSSALWPFATLGWPDKT 503

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D    K +P DL + G DIL F    +      L+   P P+           G K+SKS
Sbjct: 504 DLLD-KHYPNDLLISGFDILFFWDARMMMQGMHLTGKAPWPRLYLHGLVRAADGAKMSKS 562

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I++ G DALR+F+    + G+D   D+  ++     + A  + N  +R  
Sbjct: 563 KGNVVDPLGLIDQYGADALRFFMSAMESQGRDIKMDERRVEG--YRNFATKLWN-ATRFC 619

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
                     I  P A    ++ I+       + +   M +     A   +   V +   
Sbjct: 620 QSNGIGASTSIAAPKATQAVNKWIIGDVVETKEALDAAMADLRFDAAANTIYHFVWDRFC 679

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           D Y +      L K N D       V    + Q+ ++L  F+P +  +++ 
Sbjct: 680 DWYIE------LIKGNFDE--ETKAVAGWALDQILVMLHPFMPFITEELWS 722



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   I           HIGHA +  + DV+ R+ RL G D L+  GTD  G      
Sbjct: 33  KGAEPFTIVNPPPNVTGSLHIGHALDNTLQDVVIRYERLRGKDALWVVGTDHAGIATQMV 92

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      +                 + +++          L  S D      T ++   
Sbjct: 93  VERQMEAKQDKRTNYSREDFVGKVWEWKEESGGTITRQLRRLGCSMDWSREQFTMDEHFS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +     +  + + G IY+      +  + +   +D EV        +     P+
Sbjct: 153 NAVLTTFVDLYNDGLIYRDKRLVNWDPKLKTAISDLEVETQDVKGGFWHFKYPL 206


>gi|254693672|ref|ZP_05155500.1| valyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213941|ref|ZP_05928222.1| valyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915548|gb|EEX82409.1| valyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 910

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRNKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAKRKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|157414288|ref|YP_001485154.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388863|gb|ABV51568.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 915

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 137/368 (37%), Gaps = 21/368 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              +    +  Y +   N   W      ++        +L   +   E   P        
Sbjct: 387 PSFIPPRWEKVYKDWLENINDWCISRQLWWGHQIPAWYVLDESQDSIEQNTP-------Y 439

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++    L  + K F   IK+  D   ++  W  +     +T G+ +  D    K++P
Sbjct: 440 VVARNEEDALIEANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNINDPDFKKWYP 498

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V G DI+ F    +       + N+P               +K+SKS GN IDPI 
Sbjct: 499 NSVLVTGFDIIFFWVARMTMMGNTFTNNIPFKDVYIHGLVRDENNKKMSKSSGNGIDPIL 558

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSV--S 367
           +I++ G DALR+ L+RE+A  G+D   D D  K        + + AN + N     +   
Sbjct: 559 LIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVLINK 618

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
               +Y        +    D+ ILS  +++  ++   ++   +  +   +         D
Sbjct: 619 TSNNNYSLNESDKTSLELCDKWILSKLNQINIKVAAMLKEYKLGESAKLLYEFTWNDFCD 678

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K     K   +R      V ++V+  + +++  F+P +  +++ +L +  +N  
Sbjct: 679 WYVEFAKQRFNNKETKNR-QISEKVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNEL 737

Query: 486 FQSLDQRL 493
                  +
Sbjct: 738 LSLQKWPI 745



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +           H+GHA+   + DV+ RF RL G +VL   GTD     +    
Sbjct: 36  DGEPFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTIL 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                   + +Q+          +  S D      T +++ ++
Sbjct: 96  EKQLKSEGKTSEDIGRNEFLKRAWNWKEQSGGRIVSQLKRIGYSVDWTRERFTLDQKLNE 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  +  K  IY+G Y   +    ++  +D EV       +      P+
Sbjct: 156 AVIEAFNILYKKNLIYRGEYLVNWCPESQSAVSDLEVEMQEVNGHLWHFKYPL 208


>gi|328955403|ref|YP_004372736.1| valyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455727|gb|AEB06921.1| valyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 900

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 125/384 (32%), Gaps = 45/384 (11%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
              E    +          +     + ++    E +F  +   +        S      P
Sbjct: 323 WFSEHGLLERVEDHEHSVMHCYRCDSSLEPWLSEQWFVAVDRLRGPATEAVTSGAVTFHP 382

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------- 221
             R  +      +G+KD  +SR+   WG +IP                            
Sbjct: 383 K-RWEQTYLTWMAGVKDWCISRQ-LWWGHRIPVFYCEDCGWTDALIEDVEICPVCGGRHV 440

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
              + ++  W  +      T G+   P+  +    P    V  +DI+      +   +  
Sbjct: 441 HQDENVLDTWFSSQLWTFATQGWPQTPEALEGHH-PTTALVTARDIIALWVARMIMSSLY 499

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               +P    V     +   G ++SKS GN +DP+++IE  G DA+R+ L+      +D 
Sbjct: 500 FLGEVPFHDVVIYPTILAADGSRMSKSKGNGVDPMDLIERYGADAMRFNLLSLCTGNQDV 559

Query: 340 FYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILS 392
            +D +         +    + A      +  +   +L + DG  P  P A T +D  ILS
Sbjct: 560 RFDAEFDPKTGDFVRSARTEQARAFVTKIWNASRFLLLNMDGYTPGPPVADTAADAWILS 619

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             ++    + + +           +   V     D Y +  K     K    RA T    
Sbjct: 620 RLAKTAAAVTDGIAGYAFGDTARTIHGFVWNEVCDWYIEVTKTRL--KDVSSRAQT-QRN 676

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
            + V+     LL   +P +   I+
Sbjct: 677 LIFVLDVSLRLLHPLMPFVTEAIW 700



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 52/172 (30%), Gaps = 19/172 (11%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA--- 65
           I+          H GHA +  I D + R  R+ G    +  GTD  G             
Sbjct: 35  ITIPPPNVTGILHAGHALDDAIQDAIVRQARMRGRSTRWIFGTDHAGIATQTRVDKKLKE 94

Query: 66  -------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILW 110
                              +  +     ++    +  S D      T +  +    R ++
Sbjct: 95  EGVSRLELGREKFIEACWDWTREYGGIIQEQIKRMGCSVDLEHERFTMDADYAQAVRRVF 154

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWME 161
                 G IY+G     +    +   +DDE    A+ G  +  ++   + +E
Sbjct: 155 VDWYRDGLIYRGRRIVNWCPSCKTAISDDEAEYHAEAGHLWLLRYPLAEPVE 206


>gi|256369373|ref|YP_003106881.1| valyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|294852301|ref|ZP_06792974.1| valyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|255999533|gb|ACU47932.1| valyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|294820890|gb|EFG37889.1| valyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 910

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|108804372|ref|YP_644309.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765615|gb|ABG04497.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 853

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 126/354 (35%), Gaps = 43/354 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           + +     ++    E ++  +       +         + P   R E I +++  + D +
Sbjct: 356 HCDRCGTVIEPWLSEQWWVSMRELAGPAIEALREERIRVYPDSWRRETIRWLE-NIHDWN 414

Query: 209 LSRKTFDWG--IKIPDDPQY------------------IMYVWIDALTNYLTTTGYLDNP 248
           +SR+   WG  I +   P+                   I+  W  +      T G+ +  
Sbjct: 415 VSRQ-LWWGHRIPVWYGPEGEVVASKEPPGEGWRQDPDILDTWFSSALWPFATLGWPERT 473

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                 F+P  L    ++I+      +       +  +P  K       +   G K+SKS
Sbjct: 474 G-DLEYFYPTSLLSTAREIMYLWVARMIMMGLRFTGEVPFRKVNVHSIVLASDGTKMSKS 532

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVIDP+++ EE G DA+R+ L+   +  +D  Y  +     +       + N    ++
Sbjct: 533 KGNVIDPLDLFEEYGTDAVRFGLLY-QSSTQDFAYSHER--ASMGRSFVTKLWN----AM 585

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
             IL   +      G  + +D  ILS  SR+ ++    ++      A+ ++         
Sbjct: 586 RFILGYPEPSG-EGGEPSLADRWILSAFSRLCRDYDAFLEECEFSEAMRRIYDFAWHEFA 644

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           D Y +      + K  P        V  EV   +  LL   +P    ++  +L 
Sbjct: 645 DWYIE------IAKVAPS--GATPRVLREVFLGILRLLHPAMPFATEEMASVLG 690



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GHA    I D L R  R+ G + L+  GTD     +    
Sbjct: 38  EREPYCIVLPPPNVTGALHMGHALNGAIQDTLVRRARMKGYEALWLPGTDHASIALQNVV 97

Query: 63  QNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD-DFIR-TTEKRHH 103
           +   +                     F              L  S D   +R T ++R+ 
Sbjct: 98  ERKLMREEGKTRWDLGREAFLERCWEFALDARSTILGQLKRLGASVDWRRLRFTMDERYV 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           D     + ++ ++G IY+G     +  RD +  +D EV  
Sbjct: 158 DAVLTAFVELYNQGLIYRGNRITNWCPRDRSAISDLEVNY 197


>gi|254689188|ref|ZP_05152442.1| valyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256257438|ref|ZP_05462974.1| valyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754690|ref|ZP_05867038.1| valyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883716|ref|ZP_05895330.1| valyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248289|ref|ZP_06932007.1| valyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674798|gb|EEX61619.1| valyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873244|gb|EEX80313.1| valyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175458|gb|EFH34805.1| valyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 910

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRNKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|238798775|ref|ZP_04642246.1| Valyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238717407|gb|EEQ09252.1| Valyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 960

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGPEVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMMTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIMPYITETIWQR 778



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGREAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|123969424|ref|YP_001010282.1| valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199534|gb|ABM71175.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 918

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 137/368 (37%), Gaps = 21/368 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              +    +  Y +   N   W      ++        +L   +   E   P        
Sbjct: 390 PSFIPPRWEKVYKDWLENINDWCISRQLWWGHQIPAWYVLDESQDSIEQNTP-------Y 442

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++    L  + K F   IK+  D   ++  W  +     +T G+ +  D    K++P
Sbjct: 443 IVARNEEDALIEANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNTNDPDFKKWYP 501

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V G DI+ F    +       + N+P               +K+SKS GN IDPI 
Sbjct: 502 NSVLVTGFDIIFFWVARMTMMGNTFTNNIPFNDVYIHGLVRDENNKKMSKSSGNGIDPIL 561

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSV--S 367
           +I++ G DALR+ L+RE+A  G+D   D D  K        + + AN + N     +   
Sbjct: 562 LIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVLINK 621

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
               +Y        +    D+ ILS  ++V  ++   ++   +  +   +         D
Sbjct: 622 TSNNNYSLNESDETSLELCDKWILSKLNQVNIKVAGLLKEYKLGESAKLLYEFTWNDFCD 681

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K     K   +R      V ++V+  + +++  F+P +  +++ +L +  +N  
Sbjct: 682 WYVEFAKQRFNNKETKNR-QISEKVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNLL 740

Query: 486 FQSLDQRL 493
                  +
Sbjct: 741 LSLQKWPI 748



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 18/180 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +           H+GHA+   + DV+ RF RL G +VL   GTD     +    
Sbjct: 39  DGEPFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTIL 98

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +    +                   + +Q+          +  S D      T +++ ++
Sbjct: 99  EKQLKSEGKTSEDIGRDEFLKRAWNWKEQSGGRIVSQLKRIGYSVDWTRERFTLDQKLNE 158

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  K  IY+G Y   +    ++  +D EV       +      P+     E 
Sbjct: 159 AVIEAFNILYKKNLIYRGEYLVNWCPESQSAVSDLEVEMQEVNGHLWHFKYPLISESGEH 218


>gi|62289887|ref|YP_221680.1| valyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699815|ref|YP_414389.1| valyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024129|ref|YP_001934897.1| valyl-tRNA synthetase [Brucella abortus S19]
 gi|237815382|ref|ZP_04594380.1| valyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254697324|ref|ZP_05159152.1| valyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730222|ref|ZP_05188800.1| valyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260545368|ref|ZP_05821109.1| valyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260757914|ref|ZP_05870262.1| valyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761736|ref|ZP_05874079.1| valyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196019|gb|AAX74319.1| ValS, valyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615916|emb|CAJ10922.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Valyl-tRNA synthetase, class Ia [Brucella melitensis
           biovar Abortus 2308]
 gi|189019701|gb|ACD72423.1| valyl-tRNA synthetase [Brucella abortus S19]
 gi|237790219|gb|EEP64429.1| valyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096775|gb|EEW80650.1| valyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668232|gb|EEX55172.1| valyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672168|gb|EEX58989.1| valyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 910

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRNKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|254509296|ref|ZP_05121388.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219547784|gb|EED24817.1| leucyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 838

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++++ G D +R F++          + + G++       AN     
Sbjct: 617 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKR 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V + V+              A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 671 VWKLVNEHTSKGAAEAVDTSALSGDQKALRRDVHKTIAKVTDDIARRQTFNTAIAAIMEL 730

Query: 421 VSEV 424
           ++++
Sbjct: 731 MNKL 734


>gi|332160863|ref|YP_004297440.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325665093|gb|ADZ41737.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 860

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T    ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREITTCSPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +    +   ++           G   + +++ S +        PD    + YV + A 
Sbjct: 206 LDRLESWPEQVKTMQRNWIGRSEGVDIVFNVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 111/332 (33%), Gaps = 39/332 (11%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +  Q        +   + LP+++    I      L       K     G
Sbjct: 493 FMESSWYYARYTCPQFDKGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAG 552

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   D+P   +      L        Y    +G +    P D  V   D           
Sbjct: 553 LVDSDEPAKRLLCQGMVL----ADAFYYSGSNGERIWVSPVDAIVERDD----------- 597

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 +        H  +     K+SKS  N IDP  ++E+ G D +R F++       
Sbjct: 598 ---KGRITKATDAEGHELVYAGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEM 654

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + + G++       AN     V R V                 TE  +S+     + 
Sbjct: 655 TLEWQESGVEG------ANRFLKRVWRLVYDHTAKGATAPLDIANLTEEQKSLRRDLHKT 708

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A V+ L++++ R      P   ++T  DRA     +  E + 
Sbjct: 709 IAKVTDDVGRRQTFNTAIAAVMELMNKLGR-----AP---QETEQDRA-----LLQEALL 755

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            +  +L  F P +   ++  L    +      
Sbjct: 756 AVVRMLYPFTPHVCFSLWQALGGEGDIDTAPW 787


>gi|318604765|emb|CBY26263.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 860

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T    ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREITTCSPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +    +   ++           G   + +++ S +        PD    + YV + A 
Sbjct: 206 LDRLESWPEQVKTMQRNWIGRSEGVDIVFNVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 74/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                   TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAYDHTAKGATAPLDIANLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LLQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|194334635|ref|YP_002016495.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312453|gb|ACF46848.1| valyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 902

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 133/364 (36%), Gaps = 48/364 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F R+    +K L           P    +         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVRMKPLAEKALDAVNDGQITFHPSHWIST-YRHWMENIQDWCISRQ-LWW 420

Query: 217 G--IKIPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                          + ++  W  +    +TT G+     
Sbjct: 421 GHRIPAWYDTEGKIWVAGSYEEACHLAGTDKLVQDEDVLDTWFSSWLWPMTTLGWTGGHQ 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P    V G DI+ F    +       + ++P     F+      KG K+SK
Sbjct: 481 ENDDLKSFYPTSTLVTGPDIIFFWVARMIMAGIYFNGDIPFRDVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ +V     G+D  + ++  +  +  + A  I N     
Sbjct: 541 SLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEEKCE--LGRNFATKIWNATRLV 598

Query: 366 VSMILKDYDGMIPTPGAFTE----------SDESILSVCSRVLQEIRENMQNQLIHRALA 415
                K +D M     A+            +D  IL    R+L+          ++  + 
Sbjct: 599 FMQREKVFDDMDSFRHAYEAFSFDSLSIQGADRWILGRYHRMLEAYHHAFAQFRLNDIVK 658

Query: 416 QVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +         D Y +A K  EL  ++ D A+  + + V ++  +  +L   +P L ++I
Sbjct: 659 IIYDFFRGDYCDWYLEALKV-ELAGSSHDEAADRVCLAVSILEGVLKVLHPVMPFLTDEI 717

Query: 474 FDIL 477
           +  +
Sbjct: 718 WHHI 721



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E   +            +GH     + D+  R+ R+ G + L+  GTD  G       
Sbjct: 45  GKEPYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYQRMQGKEALWLPGTDHAGIATQTVV 104

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+           L IS D    + T ++    
Sbjct: 105 EKKLRKEGISRHDLGRKEFLDHVWQWRDEYGGLILRQLRKLGISCDWRRNLFTMDESASM 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +  +   G IY+G     +    +   +D+EV  
Sbjct: 165 AVKHAFVTLYRDGLIYRGKRIINWCPVSQTALSDEEVIM 203


>gi|238793058|ref|ZP_04636687.1| Valyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727658|gb|EEQ19183.1| Valyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 914

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 337 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 394

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 395 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 454

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 455 QTDALKTFH-PTSVVVSGFDIIFFWIARMIMMTMHFMKDENGKPQVPFKTVYMTGLIRDD 513

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 514 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 573

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 574 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 630

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 631 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 689

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 690 GSDAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 727



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 25/169 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +      
Sbjct: 1   MIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAE 60

Query: 70  ---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
                          K++  +       +R  R + + +D   + F  T +    +  + 
Sbjct: 61  EGKTRHDYGRDAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDDGLSNAVKE 118

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 119 VFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 167


>gi|190410079|ref|YP_001965603.1| probable methionyl-tRNA synthetase [Sinorhizobium meliloti]
 gi|125631109|gb|ABN47110.1| probable methionyl-tRNA synthetase [Sinorhizobium meliloti SM11]
          Length = 769

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 92/531 (17%), Positives = 182/531 (34%), Gaps = 39/531 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             +++ +    PN   H+GH     + ADV  RF R++G+     TG+D+    +   A+
Sbjct: 124 RPVFVFSTPPTPNGDLHLGHLSGPYLGADVFVRFQRMNGVAAYHLTGSDDFQSYVVARAR 183

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG 122
                      Q +   R    ++DI  D +  T T+  + +  +  + ++   G + + 
Sbjct: 184 QKNHEPLQVAAQYAAEIRATLSLMDIMIDQYTVTGTDPTYREGLQDFFSRLVRSGAVQRR 243

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF---FRLSAYQDKLLSY 179
             +  +      Y  + +V             N  +   E  +        +        
Sbjct: 244 TDAALFDAETRKYLYEVDVGGRCPNCSAPTGGNICEECGEPNFCVDIVNAKSNLSIAEPV 303

Query: 180 YESHPEFILPIERRNEVISFVK---------SGLKDLSLSRKTFD--------WGIKI-- 220
             +   F LP+    E +               L      R+ F         WG+    
Sbjct: 304 RGTADRFSLPLHNFRETVLAHHRTGKVSPRLQELARRVFEREEFHLPLTHPSEWGVPPVE 363

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILRFHA 272
           P + + +++VW +    +L     L        + W AD        +H  G D   +H 
Sbjct: 364 PVEGRQVIWVWPEMAYGFLHGIAELGRRH---GRDWSADAPQRDWKIVHFFGYDNSFYHT 420

Query: 273 IYWPAFLLSANLPLPKKV--FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           I +P     A       +    + F L  GEK S S  + I   +++    VDA+RY+L 
Sbjct: 421 ILYPVLYALAYPDWACDIEYNVNEFYLLDGEKFSTSRRHAIWGKDILSSETVDAVRYYLC 480

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +   ++    +  ++  L       ++   + I   +DG  P  G ++    + 
Sbjct: 481 LTRGETERTNFELAACQAVISETLIGRWQGWLNGLGAHIAALFDGRAPDAGVWSPIQSAF 540

Query: 391 LSVCSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           L+     L  I  +       ++  + ++  LV +V R+  A +         D   TV+
Sbjct: 541 LARLQTRLDAIAIHYGADGFSLNGVMRELNGLVDDVIRFSKAHQSLSGNPGTHDEWRTVI 600

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            + +   R LA      +P+ A K+ + +        +      L PG  +
Sbjct: 601 ALELAAARLLAQCAAPVMPRFAGKLAEAIGTDGATSHWSDHVTLLPPGAEI 651


>gi|225872764|ref|YP_002754221.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792609|gb|ACO32699.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 887

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ Q H+GH     I D LAR+  + G +VL   G D  G     A
Sbjct: 58  SGKPKYYVLEMLPYPSGQLHMGHVRNYSIGDALARYMWMQGYNVLHPMGWDAFGLPAENA 117

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       + +   N  +     D L +SYD  + + T    ++   +  + ++ +KG  
Sbjct: 118 ALKNNTPPREWTLSNIAHMHKQMDRLGLSYDWRNEVTTCLPEYYRWNQWFFLRMYEKGLA 177

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  +      +++V    +G  +  +   V+  + E +F R++ Y  +LL  
Sbjct: 178 YRKQSKVNWCPQCATVLANEQV---VNGCCWRHEDQIVEQRDLEQWFLRITNYAQELLDD 234

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                 +   +            G
Sbjct: 235 LNQLEGWPEKVRTMQRNWIGRSEG 258



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 141/399 (35%), Gaps = 46/399 (11%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T +         +  +  +    K       +   +A         G   Q Y     P+
Sbjct: 440 TSEESILINSGDFNTLGCQEAQQKMAAYAQENSFGQAQVTFRLKDWGVSRQRYWGTPIPM 499

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              E++G           ++   +     +LP +           G     ++      G
Sbjct: 500 IHCEKDG-----------IVPVPDDQLPVLLPPQIEITQQGGSPLGRDPGFVNTTCPKCG 548

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAI 273
            K   +    M  ++D+   +   T   ++         A ++P D ++ G +    H I
Sbjct: 549 GKARRETD-TMDTFVDSSWYFYRYTSARNDKAPFDTDTVAYWFPIDQYIGGVEHAILHLI 607

Query: 274 YWPAFLLSA-------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           Y   +           N     ++F+ G ++  G K+SKS GNV+ P ++I   G DA R
Sbjct: 608 YSRFWTKVMRDLGIVKNDEPATRLFTQGMVIKNGAKMSKSKGNVVSPEDMIARYGADATR 667

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AF 383
            + +      +D  + +DG+          G+   +SR   + ++  +      G   A 
Sbjct: 668 MYALFAAPPDRDLDWQEDGV---------AGVSRFLSRVYRLAMRHAERAKQASGGAEAN 718

Query: 384 TESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           + +++++L    + +++I E+   +   +  +A ++ LV+            E    N +
Sbjct: 719 SATEQALLRKLHQTIRKITEDFGGRWHFNTCIAAIMELVNTATAA-------EAAIQNGE 771

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  VL   +  +  L      F P LA +++D L   D
Sbjct: 772 VSDAVLRELLRNLVLLL---APFAPYLAFELWDQLGEQD 807


>gi|322421080|ref|YP_004200303.1| leucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127467|gb|ADW15027.1| leucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 824

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  SRKKYYLLEMFPYPSGKIHMGHVRNYSIGDVIARFKRMQGYNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     L +SY  D  + T +  ++   + ++ ++  KG  Y
Sbjct: 91  IQNKSHPAKWTYENIAYMRGQLKRLGLSYDWDRELATCDLDYYKWEQKIFLEMYRKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +  + E    +++V  G            VQ  E E + FR++ Y  +LL   
Sbjct: 151 KKSSAVNWCPKCETVLANEQVEDG----CCWRCDAIVQQKELEQWSFRITNYAQELLDDT 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
                +   +            G
Sbjct: 207 YKLAGWPERVLTMQRNWIGRSVG 229



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 122/365 (33%), Gaps = 43/365 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G      A    +L               R E  +    
Sbjct: 423 WGISRQRYWGNPIPVINCDLCGVVAVPEADLPVVLPMDAEFTGEGGNPLARVESFTNCTC 482

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                + SR+T         D              Y +        D  + + W P D +
Sbjct: 483 PQCGEAASRET---------DTMDTFVQSSWYFLRYCSPKFTAGPLDREQVEAWMPVDQY 533

Query: 262 VIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   F          + + P    + + G ++  G K+SKS GNV+DP
Sbjct: 534 IGGIEHAVLHLLYARFFTKVLRDLGYCNVDEPF-SNLLTQGMVIKDGAKMSKSKGNVVDP 592

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +IE  G D  R F +      KD  +   G+         N +  LV   +  I    
Sbjct: 593 NALIERYGADTARLFSLFAAPPEKDLDWSDQGVDGSYR--FLNRVWRLVFDVLPAIK--- 647

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQK 432
                     +   +++     + ++++ E+++     + A+A V+ LV+       A  
Sbjct: 648 GAGSVETDKLSAEGKNLRRAVHKTIKKVSEDIEERFHFNTAIAAVMELVNA----IQAFS 703

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                K  P+  + V     E +  +A LL  FVP  A +++  L           L+Q 
Sbjct: 704 ----AKAAPENVAVVR----EAMESVARLLAPFVPHFAEELWAELGHET------GLEQA 749

Query: 493 LKPGF 497
             PG+
Sbjct: 750 GWPGY 754


>gi|206602933|gb|EDZ39413.1| Leucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 828

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y      YP+ + H+GH     I D LAR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKKTFYCLEMFPYPSGRIHMGHVRNYSIGDALARYKRMRGFNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   V+ DQN  + ++    L +SYD    + T    ++   +  + K  +KG  Y
Sbjct: 91  IQRGIHPAVWTDQNIAHMKEQLSRLGLSYDWSREVTTCLPEYYRWNQWFFLKFYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V +G          +PV     E ++ R++ Y  +LL   
Sbjct: 151 KKEGLLNWCDSCLTVLANEQVEEG----LCWRCKSPVTLRPMEQWYLRITDYARELLDAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
              P +   +    E       G
Sbjct: 207 PDLPGWPEKVRVMQENWIGKSEG 229



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 117/338 (34%), Gaps = 33/338 (9%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E  G      +    +L    +         R +E       
Sbjct: 423 WGISRQRYWGTPIPIVYCETCGTVPVPESDLPVILPRDVAFTGKGGSPLRDSESFFRTTC 482

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                   R+T         D     +        +   +   +    + A+ W P D +
Sbjct: 483 PNCQAPARRET---------DTMDTFFDSSWYFLRFTDPSNTAEPFSKTAARQWIPVDQY 533

Query: 262 VIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           + G +    H +Y   F        +  +    + + + G +L  G K+SKS GNV+DP 
Sbjct: 534 IGGVEHAILHLLYSRFFTRALKDLGIVDSPEPFRSLLTQGMVLKDGAKMSKSKGNVVDPD 593

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           ++IE  G D +R F +      KD  +D   ++          +   V            
Sbjct: 594 QLIERYGADTVRLFTLFSAPPDKDLAWDDKAVEGAYR--FLGRLYQRVLELSRFPAIPPS 651

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKP 433
                 G  + + + +L+     ++++  +++ N  ++ A+A+++ L++           
Sbjct: 652 SGGAARGPVSSAQKPLLAKIHETIRDVTFDLESNNQMNTAIARLMELLNA---------- 701

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             L   +P++   +  +  E    L +LL  F P L+ 
Sbjct: 702 --LGNGDPEKTEELP-LLREGYTTLLLLLSPFAPHLSQ 736


>gi|330445214|ref|ZP_08308866.1| leucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489405|dbj|GAA03363.1| leucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 857

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DQLDGWPEMVKTMQRNWIGRSEG 229



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 106/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 552 VTSDEPFKQLLCQGMVLADAFFYTTDKGGKEWVAPTDVTVERDGKGRITSAVDTDGRNVE 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A T   +++     + + ++ +++  +   + A+A
Sbjct: 666 RFLKRVWKLVREHTEKGAAEAVDAAALTADQKALRRDIHKTIAKVSDDIGRRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++            +L K   +       +  E ++ +  +L    P +  +++ 
Sbjct: 726 AIMELMN------------KLAKAPQESVQD-RAILDEALKAIVAMLYPITPHICFEMWT 772

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L   D +N  +   D++
Sbjct: 773 ALGETDIDNAQWPQADEK 790


>gi|123443211|ref|YP_001007185.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166231653|sp|A1JQ25|SYL_YERE8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122090172|emb|CAL13035.1| leucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 860

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T    ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCSPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G   + +++ S +        PD    + YV + A 
Sbjct: 206 LDTLESWPEQVKTMQRNWIGRSEGVDIVFNVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 74/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                   TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAYDHTAKGATAPLDVANLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LLQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|260878357|ref|ZP_05890712.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308090259|gb|EFO39954.1| leucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 790

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 82/196 (41%), Gaps = 28/196 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++++ G D +R F++          + + G++       AN     
Sbjct: 617 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKR 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V + V    +          A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 671 VWKLVKEHAEKGAAEAVDTAALSGEQKALRRDVHKTIAKVTDDIARRQTFNTAIAAIMEL 730

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP-KLAN--KIFDIL 477
           ++            +L K   + A     +  E +++L   L    P   A+  +++  L
Sbjct: 731 MN------------KLAKAPQESAQD-RAILDEALKRLYDAL----PNHSAHSYELWTAL 773

Query: 478 FVAD-ENRCFQSLDQR 492
             +D +N  + +L ++
Sbjct: 774 GESDIDNAAWPTLMRK 789


>gi|119504404|ref|ZP_01626484.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459912|gb|EAW41007.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 863

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y      YP+ + H+GH     IADV+AR+ R+ G +VL   G D  G     AA  
Sbjct: 81  EKFYCLAMFPYPSGKLHMGHVRNYTIADVIARYQRMQGKNVLQPMGWDAFGLPAENAAIA 140

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +   N    R     L  +YD    + T +  ++   +  + ++ ++G  YK 
Sbjct: 141 NQVPPADWTLDNIAEMRSQLSRLGFAYDWSREVTTCQPDYYRWEQWFFTRLLERGLAYKK 200

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          NPV+      +F R++AY  +LL   +S
Sbjct: 201 EAEVNWCENDQTVLANEQVVDGK----CWRCDNPVERKAISQWFIRITAYAQELLDDLDS 256

Query: 183 HPEFILPIERRNEVISFVKSG 203
             E+   +            G
Sbjct: 257 LTEWPEQVVAMQRNWIGRSEG 277



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 39/266 (14%)

Query: 232 IDALTNYLTTT---GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y       G  +     +A +W   D +V G +    H +Y   F         
Sbjct: 542 FMESSWYYARYASAGNNNAMLDEEANYWLEVDQYVGGIEHAILHLLYARFFHKLLRDEGL 601

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++++ P  +++ + G +L  G K+SKS GN +DP E+I+  G D +R F +      +  
Sbjct: 602 VNSDEPF-RRLLTQGMVLKDGTKMSKSRGNTVDPQELIDRYGADTVRLFSMFAAPPEQSL 660

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSR 396
            +   G++         G    + R   M+ +       T    +E D   +++      
Sbjct: 661 EWSDSGVE---------GANRFLRRLWRMVSEHISQGSVTNIEASELDKAQKALRRKTHE 711

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + ++ ++   +   + A+A V+ L +EV +  D      L        + +L +     
Sbjct: 712 TIGKVDDDYGRRQTFNTAIAAVMELCNEVSK-LDTGSANGLAVEREALKAALLLLC---- 766

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
                     VP +   ++  L   D
Sbjct: 767 --------PIVPHVTEHLWRELSGED 784


>gi|159044631|ref|YP_001533425.1| valyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912391|gb|ABV93824.1| valyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 1037

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 12/263 (4%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I +  DP  ++  W  +    + T G+ ++ +    K++P    V G+DIL F    +  
Sbjct: 597 IPLVQDPD-VLDTWFSSGLWPIGTLGWPEDTE-ELRKYFPTSTLVTGQDILFFWVARMMM 654

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               ++  +P  +          KG+K+SKS+GNV+DP+E+I+E G DALR+      + 
Sbjct: 655 MQLAVTGEVPFREVYLHGLVRDAKGKKMSKSVGNVVDPLEIIDEYGADALRFSSAAMASL 714

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSV 393
           G     D   ++     +    + N  +R   M  +   +      PG     +  I+  
Sbjct: 715 GGVLKLDLQRVQG--YRNFGTKLWN-ATRFAEMNEVFTAHTQSAMPPGCTETVNRWIIGE 771

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            ++V + +   +     + A   + + V     D Y +  KP  L   +  +A T   V 
Sbjct: 772 TAKVREAVDTALAEYKFNDAANALYAFVWGKVCDWYVEFAKPLLLDGDDATKAET-RAVM 830

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
             V+ Q  ILL   +P +  +++
Sbjct: 831 AWVLDQCFILLHPIMPFITEELW 853



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 57/188 (30%), Gaps = 32/188 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G       +    
Sbjct: 39  CVMIPPPNVTGSLHMGHAFNNTLQDILIRWKRMQGYDTLWQPGTDHAGIATQMVTEREMA 98

Query: 68  TTKVFVDQNSRNFRDMADVLD-------------------ISYDDFIRTT-----EKR-- 101
                        + +A V +                     +     T      +    
Sbjct: 99  ANGEPTRAEMGRAKFLARVWEQKVKSRGTIIGQLKRIGASCDWSREAFTMGGADGDPEKG 158

Query: 102 ----HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                HD    ++  + DKG IY+G     +    E   +D EV       +      P+
Sbjct: 159 NGPNFHDAVIKVFVDMYDKGLIYRGKRLVNWDPHFETAISDLEVENIETPGHMWHFKYPL 218

Query: 158 QWMEEEGY 165
              E   Y
Sbjct: 219 AGGETYEY 226


>gi|256113493|ref|ZP_05454327.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994876|ref|ZP_06107433.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765989|gb|EEZ11778.1| valyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 910

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDSHCFVEKSEAEAKAAARAHYGED 469

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREVKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|290473520|ref|YP_003466390.1| valine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289172823|emb|CBJ79594.1| valine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 965

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 138/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      L   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVALEAVENGDIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDAQGNVYVGRDEEEVRRENNLSADITLTQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P ++ V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTNVLVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMIDGISLENLLEKRTGNMMQPQLAEKIGKRTEKQFPEGIEAHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLQG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            + + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 682 MSLSLADRWILAEFNQTVKTYREALDTYRFDIAANILYEFTWNQFCDWYLELSKP-AINK 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  +EV+  L  L    +P +   I+  + V
Sbjct: 741 GSEAEVRAARHTLIEVLEGLLRLAHPIIPFITEIIWQRVKV 781



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 44  TSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMVRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           F+D+  +             R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGNITNQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSKAVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENREVKGSMWHLRYPL 218


>gi|17987310|ref|NP_539944.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260563967|ref|ZP_05834453.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|81851832|sp|Q8YGX8|SYV_BRUME RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|17982990|gb|AAL52208.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260153983|gb|EEW89075.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 910

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDSHCFVEKSEAEAKAAARAHYGED 469

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|270263710|ref|ZP_06191979.1| leucyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042594|gb|EFA15689.1| leucyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 902

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 73  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 132

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 133 VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCDPDYYRWEQWFFTKLYEKGLVY 192

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 193 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLNDL 248

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 249 DTLESWPEQVKTMQRNWIGRSEG 271



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK---AKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T    +        A +W P D +V G +    H +Y+  F     
Sbjct: 532 FDTFMESSWYYARYTCPQYDQGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLR 591

Query: 280 -----------------------------LSANLPLPKKVFSHGFILHKGE--------- 301
                                         S        V +      KG          
Sbjct: 592 DAGLVDSDEPAKRLLCQGMVLADAFYYTGNSGERVWVSPVDATVERDDKGRIVKATDPQG 651

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E+ G D +R F++          + + G++     
Sbjct: 652 RELVYAGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG---- 707

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V +     L+          A  E  +++     + + ++ +++  +   +
Sbjct: 708 --ANRFLKRVWKLAYEHLEKGAVQPLNVAALNEDQKALRRDLHKTIAKVTDDIGRRQTFN 765

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A V+ L++++     A+ P   + +  DRA     +  E +  +  +L  F P +  
Sbjct: 766 TAIAAVMELMNKL-----ARAP---QDSEQDRA-----LLQEALLSVVRMLYPFTPHVCF 812

Query: 472 KIFDILFVADENRC--FQSLDQR 492
            ++  L    +     +   D++
Sbjct: 813 SLWQALGGEGDVDTAAWPQADEQ 835


>gi|225852457|ref|YP_002732690.1| valyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264051|ref|ZP_05466583.1| valyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640822|gb|ACO00736.1| valyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094236|gb|EEZ18113.1| valyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408971|gb|ADZ66036.1| valyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538685|gb|ADZ86900.1| valyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 910

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQ----------------------- 225
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDSHCFVEKSEAEAKAAARAHYGED 469

Query: 226 -------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|145298097|ref|YP_001140938.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166230606|sp|A4SJW8|SYL_AERS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|142850869|gb|ABO89190.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 858

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V              PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDMTVLANEQVVDN----CCWRCDTPVEQKEIPQWFIKITDYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 75/194 (38%), Gaps = 23/194 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  ++E  G D +R F++          +   G++       A      
Sbjct: 618 KMSKSKNNGIDPQLMVERYGADTVRLFMMFASPAEMTLEWSDSGVEG------AQRFLRR 671

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R     +           A T   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 672 LWRLTFEHVSAGAVPALDVAALTSEQKAVRRELHKTIAKVSDDVGRRQTFNTAIAAIMEL 731

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ + +         L     DRA     +  E +  + ++L    P +  +++ +L   
Sbjct: 732 MNNLAK---------LGSDEQDRA-----LMQEALETVVVMLSPITPHIGFELWKMLGKG 777

Query: 481 D--ENRCFQSLDQR 492
           D  ++  +   D+ 
Sbjct: 778 DDVDHATWPVADEA 791


>gi|124516135|gb|EAY57643.1| Leucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 828

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y      YP+ + H+GH     I D LAR+ R+ G +VL   G D  G     AA
Sbjct: 31  SKKTFYCLEMFPYPSGRIHMGHVRNYSIGDALARYKRMRGFNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   V+ +QN  + ++    L +SYD    + T    ++   +  + K  +KG  Y
Sbjct: 91  IQRGIHPAVWTEQNIAHMKEQLSRLGLSYDWSREVTTCLPEYYRWNQWFFLKFYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V +G          +PV     E ++ R++ Y  +LL   
Sbjct: 151 KKEGLLNWCDSCLTVLANEQVEEG----LCWRCKSPVTLRPMEQWYLRITDYAQELLDAI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
                +   +    E       G
Sbjct: 207 PDLQGWPEKVRVMQENWIGKSEG 229



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 116/342 (33%), Gaps = 41/342 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E  G      +    +L    +         R +E       
Sbjct: 423 WGISRQRYWGTPIPIIYCETCGTVPVPESELPVILPRDVAFTGKGGSPLRDSESFFRTTC 482

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWP 257
                   R+T              M  + D  + Y        N     +K     + P
Sbjct: 483 PNCQAPARRET------------DTMDTFFD-SSWYFLRFTDPSNTAEPFSKIAARQWIP 529

Query: 258 ADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            D ++ G +    H +Y   F           +    + + + G +L  G K+SKS GNV
Sbjct: 530 VDQYIGGVEHAILHLLYSRFFTRALKDLGFVDSPEPFRALLTQGMVLKDGSKMSKSKGNV 589

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP ++IE  G D +R F +      KD  +D   ++          +   V        
Sbjct: 590 VDPDQLIERYGADTVRLFTLFSAPPDKDLAWDDKAVEGAYR--FLGRLYQRVLELSRFPS 647

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFD 429
                        + + + +L+     ++++  +++ N  ++ A+A+++ L++       
Sbjct: 648 PPPSSGGTGKTPVSSAQKPLLAKIHETIRDVTFDLESNNQMNTAIARLMELLNA------ 701

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
                 L   NP++A  +  +  E    L +LL  F P L+ 
Sbjct: 702 ------LGNGNPEKAEELP-LLREGYTTLLLLLSPFAPHLSQ 736


>gi|193212076|ref|YP_001998029.1| valyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085553|gb|ACF10829.1| valyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 902

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 134/365 (36%), Gaps = 49/365 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F ++    +  L           P    N         ++D  +SR+   W
Sbjct: 362 VEPYLSEQWFVKMQPLAEPALKAVNDGEIRFHPEHWINT-YRHWMENIQDWCISRQ-LWW 419

Query: 217 G--IKIPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                          + ++  W  +    LTT G+     
Sbjct: 420 GHRIPAWYDDKGNVWVAASYDEACHLAGTDKLVQEEDVLDTWFSSWLWPLTTLGWTGLHS 479

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P D  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 480 DNDDLRAFYPTDTLVTGPDIIFFWVARMIMAGLHFKGDVPFRDVYFTSIIRDMKGRKLSK 539

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ +V     G+D  + ++  +  +  + A  I N  SR 
Sbjct: 540 SLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEEKCE--LGRNFATKIWN-ASRF 596

Query: 366 VSM-----------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           V M            +  +    P     + +   ++S  + +L+   + M N  ++  +
Sbjct: 597 VFMQREKLFATSEEFVDAFTNFTPQRELMSSAGLWLMSRYNAMLERYHQAMANFKVNDMV 656

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y +A K     +T+ +R    + + V V+  +   L   +P + ++
Sbjct: 657 KIVHEFFWGDYCDWYVEALKSELAGETSEERGRHAVCLAVSVLEGVLKALHPVMPFITDE 716

Query: 473 IFDIL 477
           I+  +
Sbjct: 717 IWHAI 721



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              +            +GH     + D+  R+ R+ G + L+  GTD  G       +  
Sbjct: 47  PYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYARMGGKEALWLPGTDHAGIATQTVVEKK 106

Query: 66  GVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++           L IS D    + T ++R  +   
Sbjct: 107 LRKEGVTRHDLGRRDFLDKVWEWREEYGGLILRQLRKLGISCDWRRNLFTMDERASEAVI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +  +G IY+G     +    +   +D+EV  
Sbjct: 167 NTFVALYREGLIYRGRRIINWCPVSQTALSDEEVIM 202


>gi|315180853|gb|ADT87767.1| leucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 858

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 110/318 (34%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRITTAVDSHGRSVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +  +       A T   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVREHTEKGEATAVDTAALTGDQKALRRDVHKTIAKVTDDIARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L++            +L K   D A     +  E ++ + ++L    P +  ++++
Sbjct: 727 AVMELMN------------KLGKAPQDDAQD-RAILDEALKAITVMLYPIAPHICFEMWN 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  A+ ++  +   D+ 
Sbjct: 774 ALGQANIDSASWPMFDEA 791


>gi|21673150|ref|NP_661215.1| isoleucyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81791910|sp|Q8KFL5|SYI_CHLTE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21646227|gb|AAM71557.1| isoleucyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 1084

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 161/437 (36%), Gaps = 25/437 (5%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD---FIRTTEKRHHDTCRIL 109
           +  + I +  +  G   +    Q++  F    DV  I Y     +IRTT+          
Sbjct: 374 DADKPIMQRLKEEGKLYRRETIQHTYPFSWRYDVPVIYYARESWYIRTTDIAPRMVA--- 430

Query: 110 WKKISDKGDIYKGCY----SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              ++   +           G +   ++ +    E + G     + A+   +    + G 
Sbjct: 431 ---LNKTINWNPPEIGTGRFGNWLEENKDWALSRERFWGTPLPVWVAEDFAIGDGPDSGK 487

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
            F + +  +    + E   E +   +  ++ +  V+  L    + R  F    K  +   
Sbjct: 488 LFAVGSVAELREGFIEIDGEEMNLGDALDKGL--VELDLHKPFVDRIWFIRDGKRFNRTP 545

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
            ++ VW D+ +       Y         K +PAD    G D     F+ ++  A L+   
Sbjct: 546 ELIDVWFDSGSMPFAQLHYPFENKELFDKTFPADFIAEGVDQTRGWFYTLHAIATLIFDR 605

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
                 V +   +   G+K+SKS GNV+DP E +E+ G DA+R++L+      +   ++ 
Sbjct: 606 PAYRNVVVNGHILDKSGQKMSKSKGNVVDPFESMEQYGADAIRWYLMITSPPWRPKLFNA 665

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEI 401
             +++         I +     +   +  +            +E D  +LS  + ++ E+
Sbjct: 666 AEIEEEQRKFFRAFINSYNFFVLYANVDGFRYEEADIPFTQRSELDRWVLSSLNTLIAEV 725

Query: 402 RENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
              M+   +  A   +         + Y     ++ W+  +  PD+ S        V+  
Sbjct: 726 TSRMEQYDLTGACRLIGDFTVDDLSNWYIRRSRKRFWK-GEMGPDKLSA-YQTLSTVLET 783

Query: 458 LAILLQAFVPKLANKIF 474
           LA L+  FVP +A KI+
Sbjct: 784 LAKLMAPFVPFIAEKIW 800



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-----NAGV 67
               N +P + H +   I DV+ R+H + G  V    G D HG  +  + +         
Sbjct: 50  PPTVNGKPGVHHLFSRTIKDVVCRYHTMQGYQVPRKAGWDTHGLPVEISVEKKLGLKNKS 109

Query: 68  TTKVF----------------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
             + +                +D N   +  + + +   +  D    T +  + ++    
Sbjct: 110 HVEEYGVGEFNREARALVYHHIDDNREGWGKLTERMGYWVDMDSPYITCDNNYIESVWWA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 170 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 206


>gi|317507069|ref|ZP_07964832.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254644|gb|EFV13951.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 886

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 128/378 (33%), Gaps = 51/378 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+      +F ++            S    I P         +    ++D  +SR+   
Sbjct: 360 PVEPRLSLQWFLKVEPLAKAAGEQVRSGAMPIAPEGLVPRWFEWTD-NMRDWCVSRQ-LW 417

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I +   P+                     ++  W  +      T G+ +     +A
Sbjct: 418 WGHRIPVWYGPEGEVRCFGPGEEIPDGWRQEEDVLDTWFSSGLWAFATLGWPEKTPELEA 477

Query: 254 KFWPADLHVIGKDILRFHAIYW----------------PAFLLSANLPLPKKVFSHGFIL 297
            F+P  + V G DIL F A+                   +    A  P  +  F      
Sbjct: 478 -FYPVSVLVTGYDILFFWAVRMAMFGGWVGQTGQSATATSAQGLAQAPFRELWFHGLVRD 536

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG+K+SKS GNVI+P++ ++  G DA R+ L+R +A G D    +       N      
Sbjct: 537 EKGQKMSKSKGNVINPLDWLDRFGADATRFALLRAVAPGADVPMGESNAIAARN--FVTK 594

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N    ++     +  G      + T++D  IL     V  E    ++     +A   +
Sbjct: 595 LFNATRFALISGAAEGFGAELAQQSLTDADRWILGRLEEVRAEADSALEAGEFAKASQAL 654

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +   D Y +  K        P RA +   V   V+  L  LL   +P + + ++ 
Sbjct: 655 YQFTWDEFCDWYLELAK-----LQMPGRADSTRAVLARVLDTLLRLLHPIMPFVTDVLWR 709

Query: 476 ILFVADENRCFQSLDQRL 493
            L    E        + L
Sbjct: 710 SL-TGGETLASAPWPEPL 726



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            E+ K  I           H+GHA E  + D + R  R+ G +VL+  G D         
Sbjct: 40  SEKPKFSIVVPPPNVTGNLHVGHAMEHAVMDAICRRKRMQGYEVLYLPGFDHASIATQAA 99

Query: 60  -----------------KAAQNAGVTTKVFVDQNSR-NFRDMADVLDISYDDFIRTTEKR 101
                            +A        K  V  N     R + D +D S + F  T ++ 
Sbjct: 100 IDKQLAEEGTSRHELGREAFLERAFAWKEQVRGNISGQMRRLGDSVDWSRERF--TMDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S +     +D EV  
Sbjct: 158 MVKAVRTVFKQLFDAGLIYQAERLVNWSPKQRTVISDAEVIH 199


>gi|260767228|ref|ZP_05876169.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617736|gb|EEX42914.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 858

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 110/318 (34%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRITTAVDSHGRSVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +  +       A T   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVREHTEKGEATAVDTAALTGDQKALRRDVHKTIAKVTDDIARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L++            +L K   D A     +  E ++ + ++L    P +  ++++
Sbjct: 727 AVMELMN------------KLGKAPQDDAQD-RAILDEALKAITVMLYPIAPHICFEMWN 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  A+ ++  +   D+ 
Sbjct: 774 ALGQANIDSASWPMFDEA 791


>gi|237785946|ref|YP_002906651.1| valyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758858|gb|ACR18108.1| Valyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 933

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 130/405 (32%), Gaps = 60/405 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    E ++ ++            S    I P  +      +V   + D  +SR+   W
Sbjct: 388 IEPRLSEQWWVKVDGLAKMASEAVSSGDTVIHPESQTPRWFDWVD-NMHDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           G  I I   P                        ++  W  +     +T G+ ++     
Sbjct: 446 GHRIPIWYGPDGEVVCCGPDDEPPTGEGWHQDPDVLDTWFSSGLWPFSTMGWPEHTK-DL 504

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSAN---------------------LPLPKKVF 291
            KF+P  + V G DIL F       F   A+                     +P      
Sbjct: 505 DKFYPTSVLVTGYDILFFWVARMMMFATYADTLEDSTLHDGQGATAKDGRPQVPFTDIFL 564

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                  +G K+SKSLGN IDP++ + + G DALR+ L R    G D     D  +   N
Sbjct: 565 HGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGTNPGTDLPLGSDAAQSSRN 624

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              A  + N  +R   M       + P   + T++D  IL       Q + +++      
Sbjct: 625 --FATKLFN-ATRFALMNGAQVGPL-PERSSLTDADRWILDRLEATRQYVDKSLAKYEFA 680

Query: 412 RALAQVISLVSE--VDRYFDAQK---PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +A   +     +   D Y +  K   P +  + N         V   V+  +  LL   +
Sbjct: 681 KASEALYHFTWDEFCDWYLEIAKTQIPRD-PEDNDATGQATQCVIGRVLDTILRLLHPTM 739

Query: 467 PKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
           P +   ++  L   V  +                     DP+  R
Sbjct: 740 PYVTETLWTALTSGVEGQKESLVVSSWPDVSMTTDGADADPVAQR 784



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         Q H+GHA +  I D LAR  R+ G +VL+  G D  G      
Sbjct: 65  SSKPSYSIVLPPPNVTGQLHMGHALDHTIMDALARQKRMQGYEVLWLPGMDHAGIATQTK 124

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     K + ++     R + D LD S + F  T ++
Sbjct: 125 VEALLKETEGKDRFDYGREEFVDKVWSWKKDYAERIGNQMRALGDSLDWSRERF--TLDE 182

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 + ++KK+ D+G IY+      +S + E   +D EV    D
Sbjct: 183 GLSRAVQTMFKKLYDQGLIYRANRMVNWSPKLETAISDIEVVYSDD 228


>gi|330504709|ref|YP_004381578.1| valyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918995|gb|AEB59826.1| valyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 943

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 70/409 (17%), Positives = 133/409 (32%), Gaps = 82/409 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +K ++  ES     +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEKAIAVVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                            + ++  W  +     +T G+   
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEAEVRAKHNLEGVALRQDEDVLDTWFSSGLWTFSTLGWPQQ 488

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            D  K    P D+ V G DI+ F    +   +  L+  +P             +G+K+SK
Sbjct: 489 TDFLKTFH-PTDVLVTGFDIIFFWVARMIMLSTHLTGQIPFKTVYVHGLVRDGQGQKMSK 547

Query: 306 SLGNVIDPIEVIE-------------------------------------EVGVDALRYF 328
           S GNV+DP+++++                                       G DALR+ 
Sbjct: 548 SKGNVLDPLDIVDGITLDELLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYGTDALRFT 607

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                  G+D  +D   ++     +  N + N  +  +        G+       +  D 
Sbjct: 608 FCSLATTGRDVKFDMGRVEG--YRNFCNKLWNAANFVIENTDGQDTGVNGEEVELSSVDR 665

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP--DRA 444
            I+S   R   E+   +       A   +   V +     Y +  KP  L   N   +R 
Sbjct: 666 WIISQLQRTEAEVTRQLDAFRFDLATQALYEFVWDQYCAWYLELVKP-VLWDENAPIERQ 724

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSL 489
                  V V+  +  L   F+P +  +I+  +     V  E    Q  
Sbjct: 725 RGTRRTLVRVLEVILRLAHPFMPFITEEIWQRIKGQAGVQGETLMLQPW 773



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L RF R+ G + L+  GTD  G       + 
Sbjct: 31  EPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMVVER 90

Query: 64  -------------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +N       R  R +   +D S + F  T +    +
Sbjct: 91  QLAAQGIGRHDLGREKFLEKVWEWKNQSGGTITRQIRRLGSSVDWSRERF--TMDDGLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ + G IY+G     +  +     +D EV    +         P+
Sbjct: 149 AVKEAFVRLHEDGLIYRGKRLVNWDTKFHTAISDLEVENHDEKGSLWNLRYPL 201


>gi|238750164|ref|ZP_04611667.1| Valyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711708|gb|EEQ03923.1| Valyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 965

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 132/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEDGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQHGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|23097817|ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81747084|sp|Q8ET99|SYI2_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|22776041|dbj|BAC12318.1| isoleucyl tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 1022

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 142/373 (38%), Gaps = 11/373 (2%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                  +    +    +++     +       DG++ N   N V W      ++     
Sbjct: 389 YYAMEGWFIKTTAVKERMQENNQSVEWFPNHMRDGRFGNFLDNMVDWNIGRNRYWGTPLN 448

Query: 173 QDKLLSYYESHPEFILPIER---RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                   +      +   R    ++V   ++     +       + G K+    + ++ 
Sbjct: 449 VWVCDDCDKQKSPHSIQELRAFADSDVPEDIELHKPYVDKITFDCECGGKMHRTKE-VID 507

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLP 287
           VW D+ +       +    D    K +PAD+ + G D     F+++   + L +   P  
Sbjct: 508 VWFDSGSMPFAQYHHPFENDELFNKQFPADVVIEGVDQTRGWFYSLLAVSTLFTGKTPYK 567

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           + +     +   G K+SKS GN + P+E+IEE G DALR+ L+ + +   +  + K  + 
Sbjct: 568 RVLSLGHILDEHGRKMSKSKGNALSPVELIEEFGADALRWALLADSSPWNNKRFSKKTVS 627

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +  +  +   +      S+   +  ++       A T  D  ILS  + V++E+  ++  
Sbjct: 628 QAKSKVIDTILNVYSFYSMYADIDKFNVAEHATDAKTTLDSWILSRLNSVIKEVTTSLDQ 687

Query: 408 QLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
             I +    +   V E+ + Y     Q+ W        +A+       EV+ +L  L+  
Sbjct: 688 YDITKGARSIALFVDELSNWYVRRSRQRFWSSGMNEDKKAA--FTTLHEVLSKLTQLMAP 745

Query: 465 FVPKLANKIFDIL 477
           ++P +A+ I+  L
Sbjct: 746 YIPFVADDIYTNL 758



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++           N  PH GHA    I D +AR+  + G  VL   G D HG  +   
Sbjct: 28  EGQQTYVFYEGPPTANGMPHAGHALGRTIKDFVARYKTMSGYQVLRKAGWDTHGLPVELE 87

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V      +++  D L   +  +D  +T    +
Sbjct: 88  VEKQLNIRGKDDIEKFGVERFIEKCKESVFVYENEWKEFTDKLGYWVDMEDPYKTLNNPY 147

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   I D+  +YKG     Y    E   +  EV +G  
Sbjct: 148 IESVWNILATIHDEDLLYKGHRVVPYCPNCETSLSSHEVAQGYK 191


>gi|218459063|ref|ZP_03499154.1| valyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 262

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 23/267 (8%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
            + ++  W  +     +T G+ D      A+++P ++ V G DI+ F    W A ++   
Sbjct: 5   DEDVLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIFF----WVARMMMMG 59

Query: 284 LPLPKK-----------VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           L   K            V+ H  +  K G+K+SKS GNVIDP+E+++E G DALR+ L  
Sbjct: 60  LHFMKDDDGNPVEPFSTVYVHALVRDKNGQKMSKSKGNVIDPLELVDEYGADALRFTLAI 119

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D   D   +      +    + N  +R   M     D       A    +  IL
Sbjct: 120 MAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGAKSDPHFVPEAAELTINRWIL 176

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           +  +R  +++ E ++    + A   +   V     D Y +  KP      +    +    
Sbjct: 177 TELARTERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDEGAKAEAQA 235

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  ++ ++  LL  F+P +  +++  
Sbjct: 236 CSAYILEEIYKLLHPFMPFMTEELWAH 262


>gi|59711360|ref|YP_204136.1| leucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81310994|sp|Q5E6U8|SYL_VIBF1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|59479461|gb|AAW85248.1| leucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 858

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 109/317 (34%), Gaps = 76/317 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVAPTDVTIERDGKGRIEKAIDDQGREVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               + T   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHEHTNKGTTEALDTSSLTGDQKALRRDVHKTIAKVSDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++++              P  ++    +  E ++ +  +L    P  +  +++
Sbjct: 727 AIMELMNKLNK-------------APQESAQDRALLDEALKAVVAMLYPMTPHASFAMWE 773

Query: 476 ILFVAD-ENRCFQSLDQ 491
            L  +D ++  + + D+
Sbjct: 774 ALGESDLDSATWPTFDE 790


>gi|224011916|ref|XP_002294611.1| valine--tRNA ligase-like protein [Thalassiosira pseudonana
           CCMP1335]
 gi|220969631|gb|EED87971.1| valine--tRNA ligase-like protein [Thalassiosira pseudonana
           CCMP1335]
          Length = 891

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 124/341 (36%), Gaps = 28/341 (8%)

Query: 162 EEGYFFRLSAYQDKLLS---YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           E+ ++  L+  +D  +S   ++          +   E I            +     + +
Sbjct: 356 EKTWYNWLTDIRDWCISRQLWWGHRIPVWYVGDSEEEYIVARNEEEARSKATEAGHAFDV 415

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS----KAKFWPADLHVIGKDILRFH--A 272
           K+  +   ++  W  +      T G+  +         ++F+P      G DIL F    
Sbjct: 416 KLRQEED-VLDTWFSSGLWPFATVGWPQDEGKDGGTDLSRFYPGTCLETGYDILFFWVAR 474

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +      L+   P              G K+SK+ GNV+DP++ + E G D+LRY LV  
Sbjct: 475 MVMLGIELTGVSPFQVIYLHGLVRAADGSKMSKTKGNVVDPLDTVAEYGADSLRYSLVTG 534

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD------------GMIPTP 380
           +  G+D   + D +    N   AN + N         LKD D                  
Sbjct: 535 VTPGQDIPLNMDKIAA--NKSFANKLWNCCKFVTDNALKDADEAELSSLGVNGPMGKEEF 592

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK- 437
                 +  I+S C  +++ +  +++   +  A +++   + +   D Y +  K    + 
Sbjct: 593 DTLALPERYIISKCHELVESVTNDIEKYQLGAAGSKIYEFLWDQYADWYIEISKTRLYEG 652

Query: 438 -KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D A T   V V ++     LL  ++P +  +++  L
Sbjct: 653 FGGGGDDAKTARRVLVYILDTSMRLLHPYMPYVTEQLWHHL 693



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 20/153 (13%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK- 70
                  + H+GHA  + + DVLARFHR+ G  VL+T GTD  G            T K 
Sbjct: 2   PPPNVTGRLHMGHAIFVALQDVLARFHRMRGRPVLWTPGTDHAGIATQLQVTTTDPTEKA 61

Query: 71  ---------VFVDQNSRNF--------RDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
                        +             R +    D + + F  T +          + ++
Sbjct: 62  KLVDRTEFLERTWKYKEEQGGAITSQLRSLGASADWTRERF--TMDPALSVGVSEAFVRL 119

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +Y+G Y   +S       +D EV    +
Sbjct: 120 HEKGLVYRGTYMVNWSPGLMTAVSDLEVEYTEE 152


>gi|260900739|ref|ZP_05909134.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108996|gb|EFO46536.1| leucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 728

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++++ G D +R F++          + + G++       AN     
Sbjct: 617 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKR 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
           V + V    +          A +   +++     + + ++ +++  +   + A+A ++
Sbjct: 671 VWKLVKEHAEKGAAEAVDAAALSGEQKALRRDVHKTIAKVTDDIARRQTFNTAIAAIM 728


>gi|145495850|ref|XP_001433917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401038|emb|CAK66520.1| unnamed protein product [Paramecium tetraurelia]
          Length = 428

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 101/412 (24%), Positives = 186/412 (45%), Gaps = 46/412 (11%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           MI AD +A++       V   TGTDEHG K+ ++A++  +  + + D  S  F+ +A+  
Sbjct: 1   MIYADAIAKYK-----SVKLLTGTDEHGLKVYRSAKHQPL--QQYCDSISNQFKQLANSF 53

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            I YD FIRTT+ +H    +  W  + + G I K  Y G+Y   +E++ N          
Sbjct: 54  -IKYDQFIRTTDPQHIVKVQKNWNLLQNNGFIIKDTYKGYYCQVEESFVN---------- 102

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                 H   Q++EE+ YFF+           Y        P   +NE +  +      +
Sbjct: 103 ------HKTDQYLEEDNYFFKFDK-------DYLETCIKNAPSRYQNE-LKQLIINSICI 148

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           S  ++ + WGI++P+D   ++YVW+DAL  YL    +               +HVIGKDI
Sbjct: 149 SRPKQRYYWGIEVPNDNNQLIYVWLDALLGYLQEEQHHY-------------MHVIGKDI 195

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           +RFHA+YWP+FL   N     ++  H   +    K+SKSLGNVIDP +++++   + +R 
Sbjct: 196 VRFHALYWPSFLKGINNQSTTELIVHNHWIRNNMKMSKSLGNVIDPFQLLKKYNQNQIRL 255

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           + + +     D  +++  L+K  N    +   N++ R     +   + ++       +  
Sbjct: 256 YFLTQGPQNMDVSFEESKLEKCWNT-YIDQFNNILFRLFRPKIISPNLLLLQQHLLDDQL 314

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                    + +  +  +          ++  +   ++   D  +PW++++ 
Sbjct: 315 IQTKQSFLELHKNTKAFLDKNQFLEGYLELQKIFVLINTLIDKNQPWKMQEQ 366


>gi|157369450|ref|YP_001477439.1| leucyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980081|sp|A8GB21|SYL_SERP5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157321214|gb|ABV40311.1| leucyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 860

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCDPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEG 229



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 59/338 (17%), Positives = 122/338 (36%), Gaps = 41/338 (12%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +  Q        +   + LP+++    I      L       K     G
Sbjct: 493 FMESSWYYARYTCPQYDKGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAG 552

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   D+P   +      L        Y     G +    PAD  V   D           
Sbjct: 553 LVDSDEPAKRLLCQGMVL----ADAFYYSGNSGERVWVSPADAIVERDD---------KG 599

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++ A  P  +++   G       K+SKS  N IDP  ++E+ G D +R F++       
Sbjct: 600 RIIKATDPQGRELVYAGM-----SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEM 654

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + + G++       AN     V +     L+            TE  +++     + 
Sbjct: 655 TLEWQESGVEG------ANRFLKRVWKLSYEHLEKGAVQPLNVATLTEDQKALRRDLHKT 708

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A V+ L++++     A+ P   +++  DRA     +  E + 
Sbjct: 709 IAKVTDDIGRRQTFNTAIAAVMELMNKL-----ARAP---QESEQDRA-----LLQEALL 755

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQR 492
            +  +L  F P +   ++  L    +     +   D++
Sbjct: 756 AVVRMLYPFTPHVCFSLWQALGGEGDVDTAAWPQADEQ 793


>gi|319440905|ref|ZP_07990061.1| valyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 952

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 121/384 (31%), Gaps = 61/384 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    E ++ ++                 I P  +      +V   + D  +SR+   W
Sbjct: 392 IEPRLSEQWWVKVDELAKMSGDAVREGDTVIHPASQEPRWFDWVDD-MHDWCISRQ-LWW 449

Query: 217 G--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGSK 252
           G  I I   P                        ++  W  +     +T G+ +  D  K
Sbjct: 450 GHRIPIWYGPDGEIVCCGPDDEKPTGEGWHQENDVLDTWFSSALWPFSTMGWPEQSDELK 509

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSAN------------------------LPLPK 288
            KF+P  + V G DIL F       F   A+                        +P   
Sbjct: 510 -KFYPTSVLVTGYDILFFWVARMMMFGTFADTITGSTLGTGESGTSADERNGRPQVPFTD 568

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                      G K+SKSLGN IDP++ + + G DALR+ L R    G D    +D  + 
Sbjct: 569 VFLHGLVRDEHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGTDLPIGEDSAQS 628

Query: 349 RVN--ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             N    L N     +     ++ ++     P     T++D  IL     +   +  ++ 
Sbjct: 629 SRNFATKLFNATKFALMNGAEVLGENEKQNFPAREELTDADRWILDKLEELRVLVDTHLD 688

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQK-----PWELK-KTNPDRASTVLYVTVEVIRQL 458
                 A   +         D Y +  K      W+        R      V   V+  +
Sbjct: 689 RYEFAVANEALYRFAWNEFCDWYLEIAKVQIPRDWDAATDAEKTRGQNTRLVLGRVLDTV 748

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
             LL   +P +   ++ +L    E
Sbjct: 749 LRLLHPSMPFVTETLWTVLTDGAE 772



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R+   I         Q H+GHA +  + D +AR  R+ G +VL+  G+D  G      
Sbjct: 69  SDRKPFSIVLPPPNVTGQLHMGHALDHTLMDSMARRKRMQGYEVLWLPGSDHAGIATQTK 128

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T          + FV++                R + D +D   + F  T + 
Sbjct: 129 VEAMLKETEGKDRFDYGREEFVERVWEWKHKFGGVIQNQMRAIGDSVDWERERF--TLDD 186

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 + ++K++ D+G IY+      +S       +D EV    D
Sbjct: 187 GLSKAVQTIFKELFDRGLIYRAKRLVNWSPVLRTAISDIEVVYSDD 232


>gi|188532525|ref|YP_001906322.1| valyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188027567|emb|CAO95414.1| Valyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 951

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 138/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAAGNVYVARSEEEARAENNLGADVVLTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D+D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDHDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            A + +D  IL+  +R ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 LALSLADRWILAEFNRTVKAYREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            N  +        V V+  L  L    +P +   I+  + V
Sbjct: 727 GNEAQLRGTRNTLVNVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHVRYPL 204


>gi|238583385|ref|XP_002390224.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
 gi|215453394|gb|EEB91154.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
          Length = 282

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 96/249 (38%), Positives = 136/249 (54%), Gaps = 12/249 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQKIA 59
            E +  Y +T I YPNA PHIGH Y ++ ADV AR+ RL   G+ V F TGTDEHG KI 
Sbjct: 21  TEVKPWYTTTPIFYPNAVPHIGHLYSLVTADVFARYQRLKNPGIPVRFVTGTDEHGLKIQ 80

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           KAA   G+  K F DQ S  FR ++ V D++Y  F+RT+++ H+ + + +W+++  +G I
Sbjct: 81  KAATAKGMQPKEFCDQTSEKFRRLSSVADVTYTTFVRTSDEVHYKSVQQIWRELDAQGLI 140

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHNPVQWMEE---EGYFFRLSAY 172
           YKG YSGWYS+ DE +Y D ++ +     Y    Y+ Q N              F     
Sbjct: 141 YKGSYSGWYSVTDECFYTDSQITRSPGNTYLSVTYDIQRNRRYCWNTAQRPTTCFASLPS 200

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKS---GLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +  LL +Y S    I P   R  VI  +++       +S  R    WGI +P DP + +Y
Sbjct: 201 EKDLLEHYRSDENSIFPQSYRLNVIRTLETETLEDISISRPRSRLTWGIPVPGDPDHTVY 260

Query: 230 VWIDALTNY 238
           VW+DAL +Y
Sbjct: 261 VWVDALISY 269


>gi|119953516|ref|YP_945725.1| valyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119862287|gb|AAX18055.1| valyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 874

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 85/482 (17%), Positives = 165/482 (34%), Gaps = 62/482 (12%)

Query: 36  RFHRLDGLDVLFTTG------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           R+  L G DV             +    +   +    +T     D N        D+  I
Sbjct: 236 RYKSLIGRDVTIPIANRKVKIIADSYVDMEFGSGALKITPA--HDPNDFEIAKRHDLAKI 293

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           +    I T + + +++  I ++ +S      K        LRD  +  D + +K   G  
Sbjct: 294 N----ILTKDAKLNESVPIEYQGLSVSVARDKIE----RDLRDRGFLIDVKNHKHQVGHC 345

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           + +    ++      +F R+    D  L    +      P +  N         ++D  +
Sbjct: 346 HRSG-EIIEPYLSNQWFVRMKPLADAALQALINDEIRFYPKKWENT-YKHWLLNIRDWCI 403

Query: 210 SRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYLT 240
           SR+   WG +I                               DP  ++  W  +     +
Sbjct: 404 SRQLV-WGHRIPAWYDVKTGEIIVSEFDPSLSEENKGRSFFRDPD-VLDTWFSSWLWPFS 461

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+          ++P +  V   DI+ F    +       +  +P      +      
Sbjct: 462 SLGWPKVTL-DFKNYYPTNTLVTAYDIIFFWVARMVMAGLEFTGQVPFKDIYITPLLRDK 520

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K+SKSLGN IDP+E+I++ G DALR+ L      G+D   D                
Sbjct: 521 KGRKMSKSLGNGIDPLEIIDQYGSDALRFTLAFLSVQGQDLNIDTKDFM------FGAKF 574

Query: 359 GNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N V  +   IL + +  +I       + D+ +L+  +  +  I    +N   + A   V
Sbjct: 575 LNKVFNASKFILSNLEGRLILDNFELDDIDKWLLTSLNSTVAVIDWAFKNYKYNEATKAV 634

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +  K   L   + +  +  +   +  +++  +++  F+P +  +I+ 
Sbjct: 635 YEFFWNDFCDWYIEISK-INLNSDDINLQNMTISKLIFFLKESLLIMHPFIPFITEEIYS 693

Query: 476 IL 477
            L
Sbjct: 694 KL 695



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 53/158 (33%), Gaps = 18/158 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  I           H+GHA    + D+L R+ R+ G + L+  GTD  G       + 
Sbjct: 36  PKFSIVAPPPNVTGILHMGHALNFTLQDILVRYKRMQGANTLWLFGTDHAGIATQAVFEK 95

Query: 65  A---------GVTTKVFVDQNS-------RNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                       + + FV++             +    L  SYD      T +       
Sbjct: 96  QLGELGKSKDDFSREEFVEEIFKLKDKHREIIVNQIKRLGASYDHSRERFTLDAGLCQAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
              +  + +KG IYKG Y         +  +D+EV   
Sbjct: 156 NKAFIDLYNKGFIYKGEYLVNLDPGSGSVVSDEEVEYR 193


>gi|197334735|ref|YP_002155515.1| leucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690268|sp|B5FBK7|SYL_VIBFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197316225|gb|ACH65672.1| leucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 858

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYSKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 109/317 (34%), Gaps = 76/317 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  + +        +  +   KG                                
Sbjct: 553 VTSDEPFKQLLCQGMVLADAFYYTNDKGGKEWVAPTDVTIERDAKGRIEKAVDDQGREVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V               + T   +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLKRVWKLVHEHTNKGTTEALDTSSLTGDQKALRRDVHKTIAKVSDDIGRRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++++              P  ++    +  E ++ +  +L    P  +  +++
Sbjct: 727 AIMELMNKLNK-------------APQESAQDRALLDEALKAVVAMLYPMTPHASFAMWE 773

Query: 476 ILFVAD-ENRCFQSLDQ 491
            L  +D ++  + + D+
Sbjct: 774 ALGESDLDSATWPTFDE 790


>gi|161618903|ref|YP_001592790.1| valyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566502|ref|ZP_05836972.1| valyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335714|gb|ABX62019.1| valyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156020|gb|EEW91100.1| valyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 910

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVLDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTRATRAVTEGITTYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGIDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|254420718|ref|ZP_05034442.1| valyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186895|gb|EDX81871.1| valyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 909

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 120/364 (32%), Gaps = 44/364 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          L   E       P         +++  ++   +SR+   W
Sbjct: 376 IEPWLTDQWYVDAKVLAQPALKAVEQGDTVFEPKSYEKIYFEWLR-NIEPWCISRQ-LWW 433

Query: 217 G--IKIPDDPQYIMYV------------------------------WIDALTNYLTTTGY 244
           G  I     P   +YV                              W  +     +T G+
Sbjct: 434 GHRIPAWYGPGGEIYVAETEEDARELAMADYDSEVALTQDEDVLDTWFSSALWPFSTMGW 493

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +  +    +F+P    V   DI+ F    +          +P  + + +      KG+K
Sbjct: 494 PEKTE-DLERFYPTSDLVTAADIIFFWVARMMMMGLHFMDEVPFKRVIINGLVRDEKGQK 552

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNVIDP+ +I+E+G D LR+ +       +D    K  ++     +    + N  
Sbjct: 553 MSKSKGNVIDPLGIIDELGADPLRFTMAILSG-TRDIKLSKQRIEG--YRNFGTKLWNAA 609

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             S     +  +G  P     T  +  I    ++  + + E ++      A   +   V 
Sbjct: 610 RFSQMNEARRVEGFDPATVEQT-INCWIRGELTKAERAVSEAIEGGRFDDAAGALYRFVW 668

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D Y +  KP      +    +    +T   + Q   LL   +P +  +++  L   
Sbjct: 669 NVFCDWYLELAKP-VFNGADEAAKAETRAMTAWTLDQTLKLLHPVMPFITEELWAELGKE 727

Query: 481 DENR 484
              R
Sbjct: 728 GPAR 731



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 24/168 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--- 63
             I           HIGHA    + D+LAR+HR+ G  VL+  GTD  G       +   
Sbjct: 36  YSIVIPPPNVTGSLHIGHALNNTLQDILARYHRMKGKAVLWLPGTDHAGIATQMVVERQL 95

Query: 64  ------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                             KV+  +        R  R +    D S + F  T ++  +  
Sbjct: 96  AAAGNVGRRDMGREAFIDKVWEWKAESGGTIVRQLRRLGASCDWSRERF--TLDEGLNAA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNA 152
            R ++ ++  +G IY+      +    +   +D EV +   DG Y++ 
Sbjct: 154 VRKVFVQLHKEGLIYRDKRLVNWDPHFQTAISDLEVEQREVDGAYWHF 201


>gi|238752603|ref|ZP_04614076.1| Leucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238709194|gb|EEQ01439.1| Leucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 860

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDTLESWPEQVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQIMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                 + TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAFDHTAKGATAPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R              P   +    +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-------------APQETAQDRALLQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDVDTAPW 787


>gi|190150200|ref|YP_001968725.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|238692395|sp|B3H1L1|SYL_ACTP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189915331|gb|ACE61583.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 834

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  TKEKYYCLSMLPYPSGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L  SY  D  + T  + ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAKWTYENIEYMKGQLKMLGFSYDWDREVTTCRQEYYKWEQWFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V++G           PV+  E   +F +++ Y ++LL++ 
Sbjct: 151 KKTSTVNWCPNDATVLANEQVHEG----CCWRCDTPVEQREIPQWFIKITDYAEELLTHL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P++   ++           G
Sbjct: 207 DNLPQWPDQVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 78/300 (26%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y     +    D  +A +W P D ++ G +    H +Y+                     
Sbjct: 503 YTCPQYHEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATK 562

Query: 277 --------AFLLSANLPLPKKVFSHGFIL-----HKGE------------------KISK 305
                   A       P  ++++     +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPEGRELVHSGMTKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GAKRFLGRV 673

Query: 366 VSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
            +++ +             A +++ + +     + + ++ +++  +   + A+A ++ L+
Sbjct: 674 WNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +      P E      D+A     V  E +  +  +L    P +  +++  L   D
Sbjct: 734 NKLTK-----APLE---NEQDKA-----VMAEALSAVVRMLYPITPHICFELWQALGNND 780


>gi|90414087|ref|ZP_01222070.1| leucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90324882|gb|EAS41410.1| leucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 858

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 111/321 (34%), Gaps = 82/321 (25%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D +V G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           +++N P  + +        +      KG                                
Sbjct: 553 VTSNEPFKQLLCQGMVLADAFHHTNEKGTKEWIAPTDVTIERDAKGRIEKAIDDQGREVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++         
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKFGADTVRLFMMFASPADMTLEWQESGVE--------- 663

Query: 357 GIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412
           G    + R   ++ +  +          A + + +++     + + ++ +++  +   + 
Sbjct: 664 GASRFLKRVWKLVHEHTNKGTVEALDVAALSGNQKALRRDIHKTIAKVSDDIGRRQTFNT 723

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A ++ L++++++              P  ++    +  E ++ +  +L    P  + +
Sbjct: 724 AIAAIMELMNKLNK-------------APQESAQDRALLDEALKAVVAMLYPMTPHASFE 770

Query: 473 IFDILFVAD-ENRCFQSLDQR 492
           +++ L   D +   + + D++
Sbjct: 771 MWEALGETDIDTAAWPTFDEK 791


>gi|74316595|ref|YP_314335.1| valyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|90108447|sp|Q3SL86|SYV_THIDA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|74056090|gb|AAZ96530.1| valyl-tRNA synthetase, class Ia [Thiobacillus denitrificans ATCC
           25259]
          Length = 912

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 129/389 (33%), Gaps = 77/389 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F  +     + L+  +S     +P              ++D  +SR+   W
Sbjct: 352 LEPMLTDQWFMSMEGLAKQGLAAVDSGELKFVPENWT-TTYRQWLENIQDWCVSRQ-LWW 409

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +     +T G+ +   
Sbjct: 410 GHRIPAWYDADGEFYVAHTEEEARKQAGGRELTQDNDVLDTWFSSALWPFSTLGWPEQTP 469

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               ++ P  + V G DI+ F    +   +  L+  +P  +   +      +G+K+SKS 
Sbjct: 470 -ELERYLPTSVLVTGFDIIFFWVARMVMMSKHLTGKVPFREVYVTGLVRDSEGQKMSKSK 528

Query: 308 GNVIDPIEVIEE-------------------------------------VGVDALRYFLV 330
           GNV+DPI++I+                                       G DALR+   
Sbjct: 529 GNVLDPIDLIDGIAVGDLVAKRTQGLMNPKQAASIEKRTRKEFPDGIAAYGTDALRFTFA 588

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDE 388
                G+D  +D          +  N + N  +R   M L+ +D       P  F+++D 
Sbjct: 589 SLATHGRDIKFDLQR--AEGYRNFCNKLWN-ATRFALMNLEGHDCGQEADQPMDFSDADR 645

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            I +   + + ++ E        +A   V   V +   D Y +  K  +L    P++   
Sbjct: 646 WIAARLQQAIGDVHEAFAAYRFDQAARAVYEFVWDEYCDWYLELAKV-QLNHGTPEQQRA 704

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                  V+     L    +P +  +++ 
Sbjct: 705 TRRTLATVLETTLRLAHPIIPFITEELWQ 733



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 24/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
              +  PN     H+GHA++  + D L R+HR+ G + L+  GTD  G       +    
Sbjct: 38  CIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMSGDNTLWQPGTDHAGIATQIVVERQLD 97

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       +R  R +    D S + F  T +        
Sbjct: 98  AQNISRHDLGREKFLEKVWEWKAHSGSTITRQMRRLGTSPDWSRERF--TMDAGLSKAVT 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  +G IY+G     +        +D EV    +  +    + P++
Sbjct: 156 EVFVRLYREGLIYRGKRLVNWDPVLGTAVSDLEVVSTEEDGFIWEINYPLE 206


>gi|209694553|ref|YP_002262481.1| leucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064863|sp|B6EIN2|SYL_ALISL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|208008504|emb|CAQ78675.1| leucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 858

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  SKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLDGWPDMVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 113/321 (35%), Gaps = 82/321 (25%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D +V G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           +++N P  + +        +      KG                                
Sbjct: 553 VTSNEPFKQLLCQGMVLSDAFHHTNEKGTKEWIAPTDVTIERDAKGRIEKAVDDQGREVQ 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++         
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKFGADTVRLFMMFAAPADMTLEWQESGVE--------- 663

Query: 357 GIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412
           G    + R   ++ +             A +   +++     + + ++ +++  +   + 
Sbjct: 664 GASRFLKRVWKLVHEHTTKGTTEALDVAALSGDQKALRRDVHKTIAKVSDDIGRRQTFNT 723

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A ++ L++++++      P   + +  DRA     +  E ++ + ++L    P  +  
Sbjct: 724 AIAAIMELMNKLNK-----AP---QGSAQDRA-----LLDEALKAVVVMLYPMTPHASFA 770

Query: 473 IFDILFVAD-ENRCFQSLDQR 492
           +++ L  ++ +   + + D++
Sbjct: 771 MWEALGESNIDTTAWPTFDEK 791


>gi|332004946|gb|AED92329.1| valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 974

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 123/359 (34%), Gaps = 24/359 (6%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  +   E     KS  + L  + + 
Sbjct: 449 PERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYVVGKDCEEDYIVAKSAEEALEKALEK 508

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
           +   ++I  DP  ++  W  +     +T G+ D        F+P ++   G DIL F   
Sbjct: 509 YGKDVEIYQDPD-VLDTWFSSSLWPFSTLGWPDVAAKDFNNFYPTNMLETGHDILFFWVA 567

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +       +  +P             +G K+SKSLGNVIDP++ I++ G DALR+ +  
Sbjct: 568 RMVMMGIEFTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTIKDFGTDALRFTIAL 627

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE--- 388
             A G+D     + L    N    N + N     +  +    D          + D+   
Sbjct: 628 GTA-GQDLNLSTERLTA--NKAFTNKLWNAGKFVLHSLPSLSDTSAWENLLDLKLDKEET 684

Query: 389 ---------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                      +S    ++  +  + +         +          D Y +A K   L 
Sbjct: 685 LLSLPLPECWAVSKLHILIDSVTASYEKLFFGDVGRETYDFFWSDFADWYIEASKS-RLY 743

Query: 438 KTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +  +  S     V + V   +  LL  F+P +   ++  L    E        Q   P
Sbjct: 744 GSGGNSVSLASQAVLLYVFENILKLLHPFMPFVTEDLWQALPYRKEALIVSPWPQNSLP 802



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 22/158 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA  + + D++ R++R++G   L+  GTD  G       +  
Sbjct: 101 PFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKM 160

Query: 66  GVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             +            F  +                + +    D S + F  T +++    
Sbjct: 161 LASEGIKRVDLGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERF--TLDEQLSRA 218

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + K+ DKG IY+G Y   +S   +   +D EV  
Sbjct: 219 VVEAFVKLHDKGLIYQGSYMVNWSPNLQTAVSDLEVEY 256


>gi|312882703|ref|ZP_07742440.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369664|gb|EFP97179.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 857

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV+ARF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLDGWPEMVKTMQRNWIGRSEG 229



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 113/318 (35%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           ++++ P  K +        +  +   KG                                
Sbjct: 552 VTSDEPFKKLLCQGMVLADAFYYTNEKGTKEWVAPTDVTVEKDGKGRITSATDHQGRHVE 611

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 612 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 665

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V+                + + +S+     + + ++ ++++ +   + A+A
Sbjct: 666 RFLKRVWKLVNEHTAKGKADDLEISQLSNAQKSLRRDVHKTIAKVTDDVERRQTFNTAIA 725

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P EL     DRA     +  E ++ +  +L    P +  ++++
Sbjct: 726 AIMELMNKLTK-----APQELP---QDRA-----IIDEALKAVVAMLYPITPHICFEMWN 772

Query: 476 ILF-VADENRCFQSLDQR 492
            L  V  ++  +   D++
Sbjct: 773 ALGNVDIDSAAWPLHDEQ 790


>gi|148265162|ref|YP_001231868.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189030266|sp|A5G677|SYL_GEOUR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146398662|gb|ABQ27295.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 824

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 14/253 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K REK Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 30  KTREKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFKRMKGFNVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     + +SY  D  + T +  ++   ++++ ++  KG  
Sbjct: 90  AIQNKSHPAKWTYENIAYMRGQLKKMGLSYDWDRELATCDVDYYKWEQLIFLQMYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +  + E    +++V  G          + V   E E + FR++ Y ++LL Y
Sbjct: 150 YKKISSVNWCPKCETVLANEQVEDG----CCWRCDSNVDQKELEQWSFRITDYAEELLEY 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
               P +   +           +G           D+ I+   D   +     D L    
Sbjct: 206 TYKLPGWPERVLTMQRNWIGRSTG--------CEIDFPIEGQMDKIKVFTTRQDTLFGAT 257

Query: 240 TTTGYLDNPDGSK 252
             +   ++P   +
Sbjct: 258 FMSLAPEHPMALE 270



 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 102/270 (37%), Gaps = 30/270 (11%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y          D  K ++W   D ++ G +    H +Y   F            +
Sbjct: 504 WYFLRYCCPDFVSGPLDKEKTEYWMSVDQYIGGIEHAVMHLLYARFFTKVLRDLGYCDID 563

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    + + G ++  G K+SKS GNV+DP  +I++ G D  R F +      KD  +  
Sbjct: 564 EPFT-NLLTQGMVIKDGAKMSKSKGNVVDPNALIDKYGADTARLFSLFAAPPEKDLDWSD 622

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+         N +  LV  ++ +I          P   T   + +     + ++++ E
Sbjct: 623 QGVDGSFR--FLNRVWKLVYDTLPIIG---GAGALDPAGLTNEGKGLRRQVHKTIRKVTE 677

Query: 404 NMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +++     + A+A  + LV+       + +P    K +P  A     V  E I  + +LL
Sbjct: 678 DIEERFHFNTAIAATMELVNT----IQSFEP----KNSPQNA----PVLKEAIESVVMLL 725

Query: 463 QAFVPKLANKIFDILFVAD--ENRCFQSLD 490
             FVP    +++  L      E   + + D
Sbjct: 726 APFVPHFTEELWAQLGNNKSLEQAGWPAFD 755


>gi|126652388|ref|ZP_01724561.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126590809|gb|EAZ84923.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 1030

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/458 (17%), Positives = 157/458 (34%), Gaps = 33/458 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +  +    + F    D  G    +  +  G   K       +    M    ++ +     
Sbjct: 324 YKTVQQHGLSFVNVVDLKGCYTEEVPELVGRFVKDCDVDIIK----MLAKKELLF----- 374

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYN 151
            +++++  +    W+  S         +    +   E    +++          DG++ +
Sbjct: 375 -SKEKYEHSYPHCWRCDSPLLYYATDSWFIKMTALKEQLLQNNQQVTWYPNHIKDGRFGH 433

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR------NEVISFVKSGLK 205
              N V W      ++                    +   R+       + I   K  + 
Sbjct: 434 FLENIVDWNISRNRYWGTPLNVWICQDCGHEEAPNSIATLRKLAKGDVEQQIELHKPFID 493

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           ++     T    +    +   ++ VW D+ +       Y      +    +PAD+ + G 
Sbjct: 494 EIVCICPTCQGDMTRTPE---VIDVWFDSGSMPFAQQHYPFEDVKTFHNQFPADVVIEGI 550

Query: 266 DILR-FHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVD 323
           D  R F         L    P  K+V S G +L + G+K+SKS GN ++P+E+IE+ G D
Sbjct: 551 DQTRGFFYSLLAVSTLFTGKPAYKQVLSLGHVLDEHGQKMSKSKGNALEPVELIEQYGAD 610

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGA 382
           ALR+  + + +      + K  +     + L + + N      +   + ++       G 
Sbjct: 611 ALRWAFLVDSSPWNPKRFSKKIVVDAK-SKLVDTLENTFKFYQLYANIDEFTYDATNTGT 669

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKT 439
            T  D+ ILS     +Q +   M       A  ++  L+ E+ + Y      + W    T
Sbjct: 670 RTPLDQWILSRLHHAIQLVTTAMDEYQFTHATREIAQLMEELSNWYIRRSRARFWAHGLT 729

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              R +       EV+  +  LL  F P +   I+  L
Sbjct: 730 ADKRGA--FSTLYEVLTNICRLLAPFTPFITEDIYRQL 765



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 19/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++           N  PH+GHA+   I DV+ARF  + G  V    G D HG  +    
Sbjct: 36  GQQPFVFYEGPPTANGLPHVGHAFGRTIKDVVARFKTMQGYLVERKAGWDTHGLPVELGV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           + A                     K  V    + +R   + L   +  DD   T    + 
Sbjct: 96  EKALGISGKQEIENYGVERFIQACKNSVFTYEQKWRSFTEQLGYWLDMDDPYLTLSNDYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           ++   +   +  +  +YKG     Y    +   +  EV +G 
Sbjct: 156 ESVWHILSHVHKEQLLYKGHRVSPYCPSCQTSLSSHEVAQGY 197


>gi|224369811|ref|YP_002603975.1| LeuS [Desulfobacterium autotrophicum HRM2]
 gi|259511541|sp|C0QI75|SYL_DESAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|223692528|gb|ACN15811.1| LeuS [Desulfobacterium autotrophicum HRM2]
          Length = 863

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     I DV+ R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKPKYYLLEMFPYPSGKIHMGHVRNYTIGDVVVRYKRMKGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +       +  +N R  R     +  SY  D  I T    ++   + L+ K+ DK  +Y
Sbjct: 91  IDNNTHPAAWTYENIRTMRRQLKRMGFSYDWDREIATCRPEYYRWEQWLFLKMLDKDMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V +            PVQ  +   +FFR++ + + LL + 
Sbjct: 151 RKESYVNWCDHCQTVLANEQVEQDM----CWRCGKPVQQKKLWQWFFRITDFAEDLLVHC 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   +    +       G
Sbjct: 207 DKLPGWPDNVTLMQKNWIGKSQG 229



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 75/181 (41%), Gaps = 15/181 (8%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NVIDP  ++++ G D  R F +      KD  ++ DG++        N +  L
Sbjct: 618 KMSKSKKNVIDPNALLDQYGADITRLFCLFAAPPEKDLEWNDDGVEG--CNRFINRVWRL 675

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISL 420
             R  S  +              E  + +    ++ ++++ ++++     + A++ V+ L
Sbjct: 676 ADRCKSTYIDLLPYSGVVADLKGEP-KKLFIKANQTIKKVTDDIEESFHFNTAISAVMEL 734

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+ +               +PD+   +  V +  I  + +LL   VP    +++ IL   
Sbjct: 735 VNAM----------YSADLDPDQTD-MGEVALFCIENIVLLLSPIVPHFCEELWSILGHG 783

Query: 481 D 481
            
Sbjct: 784 P 784


>gi|238785041|ref|ZP_04629038.1| Valyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714082|gb|EEQ06097.1| Valyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 965

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGPEIALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMMTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGREAFIDKIWQWKDESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|123440871|ref|YP_001004862.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087832|emb|CAL10618.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 965

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAANILYEFTWNQFCDWYLELAKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|256395449|ref|YP_003117013.1| methionine--tRNA ligase [Catenulispora acidiphila DSM 44928]
 gi|256361675|gb|ACU75172.1| Methionine--tRNA ligase [Catenulispora acidiphila DSM 44928]
          Length = 662

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 100/536 (18%), Positives = 186/536 (34%), Gaps = 49/536 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ER +   ST    PN   H+GH     + ADV  R+ RL G      TG+D++   + 
Sbjct: 118 LTERPQFVFSTP-PTPNGDLHLGHLSGPYLGADVYVRYQRLLGNRAWHLTGSDDYQSYVT 176

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGD 118
             A   GVT        S         +DI  D++  T+  + + +  +  + ++ D G 
Sbjct: 177 AVAAKDGVTPAEAAAHYSAEIAATLKAMDIDVDEYYVTSVAEGYPEGLQGYFSRLVDSGH 236

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG-------------- 164
           +        +      Y  +  V       +  A  N  +   E                
Sbjct: 237 VSPASTPALFDAETHEYLYEVNVGGSCPACFSPAGGNICEECGEPNLVADLVDPVSGISG 296

Query: 165 ----------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                     Y   L  + D +  ++      I   E    V +  +  L     S    
Sbjct: 297 TAPKQADAERYTLPLHEFADIVADHHRRGRVPIRLRELAQRVFAHERLDLPVSHPS---- 352

Query: 215 DWGIKIPDD--PQYIMYVWIDALTNYLTTTGY------LDNPDGSKAKFWPADLHVIGKD 266
            WG++  +D     +++VW +    +L                   ++ W   +H  G D
Sbjct: 353 GWGVQPAEDDLDGQVIWVWPEMSYGFLHGIERLGAELGELWSSREPSRDWKI-VHFFGYD 411

Query: 267 ILRFHAIYWPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
              +H+I +P     A+      +  H   F L +G+K S S  + I   E++    VDA
Sbjct: 412 NSFYHSILYPVLYRLAHPEWNPDIDYHVNEFYLLEGQKFSTSRRHAIWGKEILNPGTVDA 471

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +RY+L      G+   + +    +     L  G    +    + +   + G +P  G +T
Sbjct: 472 VRYYLSSTRPEGERTDFRRAEFDRACAETLVGGWEQWLHDLGARLDAGFGGTVPDAGTWT 531

Query: 385 ESDESILSVCSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP- 441
               + L+  S  L EI   +  +   +  A   + ++V +  R F  Q+   L   +  
Sbjct: 532 SEQTAFLARLSLRLDEITAALNPEGFSLRSAAQVLDAIVGDA-RAFSRQQS-ALAGIDRW 589

Query: 442 -DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
              A T + + +   R LA      +P+ + K+   L +      +      ++PG
Sbjct: 590 NSEARTAIALELAAARLLAAASAPLMPRFSAKLAAALGIPA-ITSWPDAADLVEPG 644


>gi|256821549|ref|YP_003145512.1| leucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795088|gb|ACV25744.1| leucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 881

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 38  SREKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPIGWDAFGLPAENAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +  +N    +    +L  +Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 98  VKNKASPAPWTYENIEYMKGQLKMLGFAYDWDRELATCKPEYYRWEQWFFTKLYEKGLVY 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  GA          PV+  E   +F +++AY ++LL+  
Sbjct: 158 KKTSSVNWCPNDQTVLANEQVVDGA----CWRCDTPVEQKEIPQWFIKITAYAEELLNDL 213

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 214 DKLDGWPEMVKTMQRNWIGRSEG 236



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 68/196 (34%), Gaps = 28/196 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +++E G D +R + +      +   +    ++              
Sbjct: 635 KMSKSKNNGIDPQSMVDEYGADTMRLYTMFASPPDQALEWQDSAVEGS---------LRF 685

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
           + R   ++              T  +   +++       + ++ ++       + A+A V
Sbjct: 686 LRRLWKLVQSHQQKGQVAKLDVTSLNNDQKALRRKTHETIAKVTDDYARRYTFNTAIAAV 745

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++ V +          + +  DRA     V  E +     +L   VP +   ++  L
Sbjct: 746 MELLNHVSK--------AEESSEQDRA-----VVQEALDAAVAMLAPIVPHICTVLWQSL 792

Query: 478 F--VADENRCFQSLDQ 491
              V +E       D 
Sbjct: 793 GGLVNEERVDVVDADW 808


>gi|210634098|ref|ZP_03297986.1| hypothetical protein COLSTE_01904 [Collinsella stercoris DSM 13279]
 gi|210158949|gb|EEA89920.1| hypothetical protein COLSTE_01904 [Collinsella stercoris DSM 13279]
          Length = 904

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 72/439 (16%), Positives = 148/439 (33%), Gaps = 22/439 (5%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA---YYNDDEVYKGAD 146
            Y +F   T     +     +++      I +  +S  +  R +     +  ++ +   D
Sbjct: 308 GYGEFTGMTRDECREAVVAWFEEHGLLDHIDEHEHSVMHCYRCDNTLEPWLSEQWFVAVD 367

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                A                   Y   + +  +      L    R  V      G +D
Sbjct: 368 KLKQPALDAVKDGRVTFHPARWTDTYTTWMENLKDWCISRQLWWGHRIPVFYCEDCGWED 427

Query: 207 LSLS--RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
             +         G       + ++  W  +      T G+   P+  +    P    V  
Sbjct: 428 ACMDDVHVCPTCGGTHVHQDENVLDTWFSSQLWTFATQGWPQKPEMLEGHH-PTTALVTA 486

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +DI+      +   +      +P    V     +   G ++SKS GN +DP+++I+  G 
Sbjct: 487 RDIIALWVARMVMSSLYFLDEVPFKDVVIYPTILAKDGSRMSKSKGNGVDPMDLIDMYGA 546

Query: 323 DALRYFLVREIACGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           DA+R+ L+      +D  +D D       LK     + A      +  +   +L + DG 
Sbjct: 547 DAMRFNLLTLCTNNQDVKFDADIDKKTKKLKGSPRTEQARAFVTKIWNASRFLLMNMDGY 606

Query: 377 IP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
            P  P A T +D  + S  ++ ++ + E +++         V +       D Y +  K 
Sbjct: 607 TPGEPVAKTAADAWMFSRLAKAVKLVTEGIEHYTFGEMARGVQNFFWNEVCDWYVEVTKT 666

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
               K + DR        + V+     ++   +P +   I+D +  +  +       +R 
Sbjct: 667 RL--KDDEDRLQA-QRNLIFVLDTSLRIMHPLMPFVTEAIWDTMPASWLDMKADGTCERA 723

Query: 494 KPGFMLHKTFDPI-FPRFL 511
           +   M+    +P  F RF+
Sbjct: 724 EA-LMVAAWPEPADFERFI 741



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 18/167 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++          H+GHA +  I D + R  R+ G    +  GTD  G            +
Sbjct: 39  VTIPPPNVTGILHMGHATDDSIQDAIVRMARMRGRSTRWILGTDHAGIATQTKVDKKLKS 98

Query: 69  ----------------TKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILW 110
                              +  +      +    +  S D      T +  + +  R ++
Sbjct: 99  EGISRLEIGRDKFIDACWDWTHEYGGTIVEQIKRMGCSVDFEGERFTMDPEYAEAVRKVF 158

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 G IY+G     +        +DDE     +  +      P+
Sbjct: 159 CDWYHDGLIYRGKRIVNWCPSCTTAISDDEAEYKEEKGHLWHLRYPL 205


>gi|54310010|ref|YP_131030.1| leucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|60390708|sp|Q6LN98|SYL_PHOPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46914449|emb|CAG21228.1| putative leucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 858

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREFATCTPEYYRWEQEFFTKLYNKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  +   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKKIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLDGWPEMVKTMQRNWIGRSEG 229



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 111/320 (34%), Gaps = 82/320 (25%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D +V G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           +++N P  + +        +      KG                                
Sbjct: 553 VTSNEPFKQLLCQGMVLADAFHHTNEKGTKEWIAPTDVTIERDAKGRIEKAIDDQGREVQ 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++         
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKFGADTVRLFMMFASPADMTLEWQESGVE--------- 663

Query: 357 GIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHR 412
           G    + R   ++ +  +          A + + +++     + + ++ +++  +   + 
Sbjct: 664 GASRFLKRVWKLVHEHTNKGTVEALDVAALSGNQKALRRDVHKTIAKVSDDIGRRQTFNT 723

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A ++ L++++++              P  ++    +  E ++ + ++L    P  + +
Sbjct: 724 AIAAIMELMNKLNK-------------APQESAQDRALLDEALKAVVVMLYPMTPHASFE 770

Query: 473 IFDILFVAD-ENRCFQSLDQ 491
           +++ L   D +   + + D+
Sbjct: 771 MWEALGETDIDTATWPTFDK 790


>gi|238761813|ref|ZP_04622787.1| Valyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238699927|gb|EEP92670.1| Valyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 965

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGRNAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|291616683|ref|YP_003519425.1| LeuS [Pantoea ananatis LMG 20103]
 gi|291151713|gb|ADD76297.1| LeuS [Pantoea ananatis LMG 20103]
          Length = 860

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   ++           G
Sbjct: 206 LDTLEEWPEQVKTMQRNWIGRSEG 229



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 96/307 (31%), Gaps = 75/307 (24%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK---AKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T             A +W P D +V G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCADYKDGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLR 549

Query: 280 -----------------------------LSANLPLPKKVFSHGFILHKGE--------- 301
                                        ++        V        KG          
Sbjct: 550 DAGLVNSNEPAKRLLCQGMVLADAFYYLGVNGERNWVSPVDVTVERDEKGRITKAVDTQG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 REVIYAGMSKMSKSKNNGIDPQLMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V +      +    +     +  +  + +     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLAYDHSQKGATVALDVASLNDDQKGLRRDLHKTIAKVSDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A V+ L++++ R      P   + +  DRA     +  E +  +  LL  F P    
Sbjct: 724 TAIAAVMELMNKLTR-----AP---QDSEQDRA-----LMQEALLAVTRLLYPFTPHACF 770

Query: 472 KIFDILF 478
            ++  L 
Sbjct: 771 VLWQTLG 777


>gi|258545483|ref|ZP_05705717.1| valine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519183|gb|EEV88042.1| valine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 935

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/393 (17%), Positives = 131/393 (33%), Gaps = 81/393 (20%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           QW  +      +       +          +P    N   ++++  L+D  +SR+   WG
Sbjct: 364 QWFVDLSSAKGMEKLTRPAIEAVRGGRIQFVPKNWENTYYNWME-NLQDWCISRQ-LWWG 421

Query: 218 --IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLDN 247
             I    D                             + ++  W  +      T G+ D+
Sbjct: 422 HRIPAWYDADGNTYVAENEAAARAKYQLPADLPLTQDEDVLDTWFSSALWPFATQGWPDD 481

Query: 248 PDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               +  F+P ++ V G DI+ F     +    + +   +P  +          +G+K+S
Sbjct: 482 TADLRD-FYPGNVLVTGFDIIFFWVARMVLMGLYCMDGAVPFKEVYIHGLVRDSEGQKMS 540

Query: 305 KSLGNVIDPIEVIEEV-------------------------------------GVDALRY 327
           KS GNV+DP+++I+ +                                     G DALR+
Sbjct: 541 KSKGNVLDPLDIIDGIDLENLVAKRTSGMMQPQKAAKIEAQTRKEFPDGIAAHGTDALRF 600

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
               +   G+D  +D   ++     +  N + N  +R V M               + +D
Sbjct: 601 TFAAQATMGRDVVFDLKRVEG--YRNFCNKLWN-AARFVLMQTDGQTITAAPFAEKSAAD 657

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA- 444
             I     R    +RE         A   V   +     D Y +  KP  L K NPD A 
Sbjct: 658 RWIYGALDRTTAAVREAFATYRFDFAAQAVYEFLWNQYCDWYLELVKP-VLAKNNPDEAE 716

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +   +  ++V+ Q   L+   +P ++ +I+  
Sbjct: 717 KARTRHTLLDVLEQTLRLIHPLMPFISEEIWQQ 749



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 22/172 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA++  I D L R+ R++G   L+  G+D  G       + 
Sbjct: 36  EPYAIMIPPPNVTGTLHMGHAFQDTIMDALIRYQRMNGRRTLWQPGSDHAGIATQMVVER 95

Query: 64  -------------NAGVTTKVFVD------QNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                            T KV+        Q  +  R +   LD + + F  T +     
Sbjct: 96  QLNAQGKTRHDLGREAFTAKVWEWKAQSGGQIMQQLRRLGASLDWTRERF--TMDDDLSR 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
             R L+ ++ + G IY+G     +    +   +D EV    +  +      P
Sbjct: 154 AVRTLFVRLHEDGLIYRGKRLVNWDPVLKTAISDLEVENREESGFMYHVRYP 205


>gi|225021674|ref|ZP_03710866.1| hypothetical protein CORMATOL_01702 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945665|gb|EEG26874.1| hypothetical protein CORMATOL_01702 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 882

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 120/384 (31%), Gaps = 58/384 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++                 I P         +V   + D ++SR+   
Sbjct: 361 PIEPRLSLQWFVKVDELARMAGDAIREGDTTIHPTSAEPRYFDWVDD-MHDWTISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 419 WGHRIPIWYGPDGEVVCLGPDDEVPEGYTQDPDVLDTWFSSALWPFSTMGWPEKTP-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----------------PLPKKVFSHGFIL 297
           KF+P  + V   DIL F       F   A L                P            
Sbjct: 478 KFYPTSVLVTAYDILFFWVARMMMFGTFAGLTTPEILGSGRDGRPQIPFTDLFLHGLVRD 537

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN IDP++ + E G DALR+ L R    G D     D  +   N   A  
Sbjct: 538 EHGRKMSKSLGNGIDPMDWVAEYGADALRFTLARGSNPGVDLPLGADAAQSSRN--FATK 595

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N  +R   M        IP     T++D+ IL    +V   + + +      +A   +
Sbjct: 596 LFN-ATRFALMNGAHV-AGIPDVADLTDADKWILGRLEQVRAAVDDYLDRYQFAKANEAL 653

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +      + K  P        V   V+  L  LL   +P +   ++ 
Sbjct: 654 YQFTWNEFCDWYLE------IAKVQPGEV--TQRVLGYVLDTLLRLLHPTMPFVTETLWR 705

Query: 476 ILFVADENRCFQSLDQRLKPGFML 499
            L    +             G +L
Sbjct: 706 AL---TDQESLNLATWPTPSGIVL 726



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 23/161 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I         Q H+GHA +  + D +AR  R+ G +VL+  G D  G       +
Sbjct: 41  KPAFSIVLPPPNVTGQLHMGHALDHTLMDAIARRKRMQGYEVLWLPGMDHAGIATQSKVE 100

Query: 64  NA----------GVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTEKRH 102
                         + + F+ +                R + D +D S + F  T ++  
Sbjct: 101 TRLKETEGKTRWDYSREEFIAKVWEWKREFGGTIGEQMRAIGDSVDWSRERF--TLDEGL 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 159 SRAVQTIFKQLYDRGLIYRAHRLINWSPVLETAVSDIEVVY 199


>gi|327393109|dbj|BAK10531.1| leucyl-tRNA synthetase LeuS [Pantoea ananatis AJ13355]
          Length = 860

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   ++           G
Sbjct: 206 LDTLEEWPEQVKTMQRNWIGRSEG 229



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 96/307 (31%), Gaps = 75/307 (24%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK---AKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T             A +W P D +V G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCADYKDGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLR 549

Query: 280 -----------------------------LSANLPLPKKVFSHGFILHKGE--------- 301
                                        ++        V        KG          
Sbjct: 550 DAGLVNSNEPAKRLLCQGMVLADAFYYLGVNGERNWVSPVDVTVERDEKGRITKAVDTQG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 REVIYAGMSKMSKSKNNGIDPQLMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V +      +    +     +  +  + +     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLAYDHSQKGATVALDVASLNDDQKGLRRDLHKTIAKVSDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A V+ L++++ R      P   + +  DRA     +  E +  +  LL  F P    
Sbjct: 724 TAIAAVMELMNKLTR-----AP---QDSEQDRA-----LMQEALLAVTRLLYPFTPHACF 770

Query: 472 KIFDILF 478
            ++  L 
Sbjct: 771 VLWQTLG 777


>gi|238760359|ref|ZP_04621500.1| Valyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701419|gb|EEP93995.1| Valyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 965

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTDALKTFH-PTSVVVSGFDIIFFWIARMIMMTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAANILYEFTWNQFCDWYLELAKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|195953587|ref|YP_002121877.1| valyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933199|gb|ACG57899.1| valyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 990

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 77/465 (16%), Positives = 155/465 (33%), Gaps = 37/465 (7%)

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           +  +      +   ++   N +D      I +   I   E         ++         
Sbjct: 384 QKTRFIPPNWEKNYNEWMENIKDWCISRQIWWGHRIPVWECEDCK-NESIYTDEDFNYVQ 442

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K  ++     + +  +   E+    +G+      N V        F++  AY+    + 
Sbjct: 443 DKLIFNLLADGKIKKVFTPKEIDDVLNGK------NFVHPHMSSLDFYKRFAYKKYYSTG 496

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                 +     RR   +      +K   +  K    G       + ++  W  +     
Sbjct: 497 INEFSIWQYVATRR--DLYKYYKDIKSFEMILKCKHCGSTNIKQIEDVLDTWFSSALWPF 554

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               + +      A  +P  L V   DIL F    +   + +L+   P            
Sbjct: 555 GVFAWPEPNHDLDA-CYPNSLLVTAFDILFFWVARMIMMSKMLNDKEPFKDVYIHALIRD 613

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG+K+SK+ GNVIDPI+VIE+ G D+LR+ L    +  +D    +   +       AN 
Sbjct: 614 EKGQKMSKTKGNVIDPIDVIEKYGADSLRFTLASLSSAVRDIKLSEQKFEAS--KFFANK 671

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N     +S   +++   I     + + D  I++  +  + ++ E +++     A   +
Sbjct: 672 IWNAAKFVISNTPENFLQDIIYGDMYEKEDYWIITALNLTIGQVTEYLEHYQFSHAAQSI 731

Query: 418 ISLVS--EVDRYFDAQKPWELKK--------TNPDRAS-------------TVLYVTVEV 454
            +       D Y +  K    +K        T+  ++              T L V   V
Sbjct: 732 YNFFWNEFCDWYIEFSKIRIYEKPIEIKEDMTDEKKSQIEQINNQIQKKKLTALAVLNTV 791

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           + +   LL  F+P + + I D     D++   +      K    +
Sbjct: 792 LSKALRLLHPFMPFITSYIHDKTIFNDKDISLKEFPAFDKEAIDI 836



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 18/172 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   +           HIGHA  + I D++ARF R+ G DV++  G D  G       +
Sbjct: 29  KKAFSMVIPPPNVTGSLHIGHALNITIQDIMARFKRMQGYDVVWVPGFDHAGIATQFVVE 88

Query: 64  NAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   +V ++  N ++    L  S D      T ++     
Sbjct: 89  RELSKENKSRLEIGREEFLKRVWQWVYKSRDNIKNQVKRLGASVDWSRERFTMDEGFSRA 148

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            R  +KK+ ++G I K  Y   +  +D    +D EV    +         PV
Sbjct: 149 VRHAFKKLYEEGLIKKDTYIINWCPKDLTALSDLEVEHEEEKGKLYYIKYPV 200


>gi|183600427|ref|ZP_02961920.1| hypothetical protein PROSTU_03998 [Providencia stuartii ATCC 25827]
 gi|188020223|gb|EDU58263.1| hypothetical protein PROSTU_03998 [Providencia stuartii ATCC 25827]
          Length = 964

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 77/401 (19%), Positives = 142/401 (35%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R     +  +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 387 IEPMLTDQWYVRTKPLAEDAIKAVEDGRIQFVPRQYENMYYSWMRD-IQDWCISRQ-LWW 444

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +  +YV                            W  +     +T G+ +
Sbjct: 445 GHRIPAWYDDKGNVYVGRDEDEVRRENNLGAEIALRQDEDVLDTWFSSGLWTFSTLGWPE 504

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 505 NTEALKTFH-PTDVLVSGFDIIFFWIARMIMMTMHFIKDENGVPQVPFKTVYMTGLIRDE 563

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 564 EGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMMQPQLAEKIAKRTRKEYPNGIEAHG 623

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  ++ D       
Sbjct: 624 TDALRFTLAALASTGRDINWDMKRL--SGYRNFCNKLWN-ASRFVLMNTENQDCGQNGGE 680

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            +F+ +D  I++  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 681 MSFSLADRWIMAQFNQTIKAYREALDTHRYDIAAGILYDFTWNEFCDWYLELSKP-AVHK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            N  +A    +  +EV+  L  L    +P +   I+  + V
Sbjct: 740 GNEAQARAARFTLIEVLEALLRLAHPIIPFITETIWQRVKV 780



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 56/177 (31%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   +           H+GHA++  I D + R+ R+ G + L+ TGTD  G      
Sbjct: 43  TSKESFCVVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTDHAGIATQMV 102

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +                           S+  R + D +D   + F  T ++
Sbjct: 103 VERKIAAEENKTRHDYGRDAFIDKIWQWKAESGGTISQQMRRLGDSVDWERERF--TMDE 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++     IY+G     +  +     +D EV              P+
Sbjct: 161 GLSKAVKEAFVRLYKDNLIYRGKRLVNWDPKLHTAISDLEVENREIKGSMWHLRYPL 217


>gi|311030540|ref|ZP_07708630.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 1029

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 133/380 (35%), Gaps = 7/380 (1%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            +                 +       DG++ N   N V W      ++          S
Sbjct: 402 WFIKTTELRDQFLQNNQKVEWYPSHIKDGRFGNFLENIVDWNIGRNRYWGTPLPVWICDS 461

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--PDDPQYIMYVWIDALT 236
               +        +   +    +  L    + R   +             ++ VW D+ +
Sbjct: 462 CEHQYAPNSEADLKARALDDIEEIELHKPYVDRIHLECEKCKGSMSRVSEVIDVWFDSGS 521

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHG 294
                  Y         + +PAD+   G D     F+++   + L +  +P  + + +  
Sbjct: 522 MPFAQHHYPFENKDKFEQQFPADVICEGIDQTRGWFYSLLAVSTLFTGKVPYKRVLSTGH 581

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +  +G K+SKS GN ++P++++++ G DA R+ L+ + A   +  + +  + +  +  +
Sbjct: 582 ILDEEGRKMSKSKGNALNPMDLVDKFGADAFRWALLADSAPWNNKRFSERVVIEAKSKVI 641

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
              +      ++   +  Y       G  T  D  +L+    V   + E ++     +A 
Sbjct: 642 DTLVNMHGFYTLYANIDGYQFNETETGEKTLLDRWVLARLYSVTAIVSEALEEYDFTKAA 701

Query: 415 AQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             + + V E+ + Y    +    K+   +      Y   +V+ + + LL  ++P LA  I
Sbjct: 702 KALETYVDEISNWYIRRSRDRFWKEGMTENKKAAYYTLHQVLVRTSQLLAPYIPFLAEDI 761

Query: 474 FDILFVADENRCFQSLDQRL 493
              L +  E+       + +
Sbjct: 762 --HLNLTGESVHLTHFPKVI 779



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 19/182 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  PH GH    +I D +AR+  + G  V    G D HG  +    + 
Sbjct: 38  ETFVFYEGPPTANGLPHAGHVLGRVIKDFVARYKTMSGYQVFRKGGWDTHGLPVELEVEK 97

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 K  V    + +RD  + +   +  +D   T + ++ ++
Sbjct: 98  QLGISGKQEIEAYGVEKFIEECKNSVFNYEKQWRDFTESIGYWLDMEDPYVTLQNKYIES 157

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              +   +  +  +YKG     Y    +   +  EV +G       +     + +++E  
Sbjct: 158 VWYILSDLHRRELLYKGHRVTPYCPSSQTTLSSHEVAQGYKDVKDLSATAKFKLVDKENE 217

Query: 166 FF 167
           +F
Sbjct: 218 YF 219


>gi|189083248|sp|A0KN87|SYL_AERHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ RL+G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + Y  D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  IKNNTAPAPWTYENIEYMKNQLKMLGLGYDWDRELATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V              PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSSVNWCPNDMTVLANEQVVDN----CCWRCDTPVEQKEIPQWFIKITDYAEELLNDI 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEG 229



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 75/194 (38%), Gaps = 23/194 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  ++E  G D +R F++          +   G++       A      
Sbjct: 619 KMSKSKNNGIDPQLMVERYGADTVRLFMMFASPAEMTLEWSDSGVEG------AQRFLRR 672

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R     +           A +   +++     + + ++ +++  +   + A+A ++ L
Sbjct: 673 LWRITFEHVSAGVAPALNVAALSVDQKAVRRELHKTIAKVSDDVGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ + +         L     DRA     +  E +  + ++L    P +  +++ +L   
Sbjct: 733 MNNLAK---------LGSDEQDRA-----LMQEALEAVVVMLYPITPHIGFELWKMLGKG 778

Query: 481 D--ENRCFQSLDQR 492
           D  ++  +   D+ 
Sbjct: 779 DDVDHATWPVADEA 792


>gi|308050963|ref|YP_003914529.1| valyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307633153|gb|ADN77455.1| valyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 948

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 139/397 (35%), Gaps = 85/397 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R++      +   E+     +P +  N   ++++  ++D  +SR+   W
Sbjct: 373 IEPMLTDQWYVRVAPLAKPAIEAVENGDIQFVPKQYENMYFAWMRD-IQDWCISRQ-LWW 430

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 431 GHRIPAWYDESGKVYVGRDEAEVRAANGLAEDVVLRQDDDVLDTWFSSALWTFSTLGWPE 490

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P      +      
Sbjct: 491 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMYFIKDEDGKSQVPFKTVYVTGLIRDE 549

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 550 QGQKMSKSKGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKIEKSTRKQFPDGISAHG 609

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D + L+     + AN + N  SR V M  ++ D       
Sbjct: 610 TDALRFTLAAMASTGRDINWDMNRLEG--YRNFANKLWN-ASRYVLMNTEEQDCGKDGGE 666

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++++R+ M       A             D Y +  KP  L+ 
Sbjct: 667 MELSLADRWILARFNDTVKQLRDAMNGYRFDIAANIAYEFTWNQFCDWYLELTKP-VLQN 725

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  +     +  + V+  L  L+   +P +  +I+ 
Sbjct: 726 GSEAQQRGTRHTLLTVLEGLLRLMHPLMPYITEEIWQ 762



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKDPYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + +++          +  S D      T +    
Sbjct: 90  VERKLAAQNITRQDLGRETFIDKVWEWKEESGGTITQQLRRMGASVDWERERFTMDPGLS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 KAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 203


>gi|305680899|ref|ZP_07403706.1| valine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659104|gb|EFM48604.1| valine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 882

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 119/384 (30%), Gaps = 58/384 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++                 I P         +V   + D ++SR+   
Sbjct: 361 PIEPRLSLQWFVKVDELARMAGDAIREGDTTIHPTSAEPRYFDWVDD-MHDWTISRQ-LW 418

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 419 WGHRIPIWYGPDGEVVCLGPDDEVPEGYTQDPDVLDTWFSSALWPFSTMGWPEKTP-ELE 477

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL----------------PLPKKVFSHGFIL 297
           KF+P  + V   DIL F       F   A L                P            
Sbjct: 478 KFYPTSVLVTAYDILFFWVARMMMFGTFAGLTTPEILGSGRDGRPQIPFTDLFLHGLVRD 537

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN IDP++ + E G DALR+ L R    G D     D  +   N   A  
Sbjct: 538 EHGRKMSKSLGNGIDPMDWVAEYGADALRFTLARGSNPGVDLPLGADAAQSSRN--FATK 595

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N  +R   M        IP     T++D+ IL    +V   + + +      +A   +
Sbjct: 596 LFN-ATRFALMNGAHV-AGIPDAADLTDADKWILGRLEQVRAAVDDYLDRYQFAKANEAL 653

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D Y +      + K  P        V   V+  L  LL   +P +   ++ 
Sbjct: 654 YQFTWNEFCDWYLE------IAKVQPGEV--TQRVLGYVLDTLLRLLHPTMPFVTETLWR 705

Query: 476 ILFVADENRCFQSLDQRLKPGFML 499
            L    +             G  L
Sbjct: 706 AL---TDQESLNLATWPTPSGIAL 726



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 23/161 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I         Q H+GHA +  + D +AR  R+ G +VL+  G D  G       +
Sbjct: 41  KPAFSIVLPPPNVTGQLHMGHALDHTLMDAIARRKRMQGYEVLWLPGMDHAGIATQSKVE 100

Query: 64  NA----------GVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTEKRH 102
                         + + F+ +                R + D +D S + F  T ++  
Sbjct: 101 ARLKETEGKTRWDYSREEFIAKVWEWKREFGGTIGEQMRAIGDSVDWSRERF--TLDEGL 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 159 SRAVQTIFKQLYDRGLIYRAHRLINWSPVLETAVSDIEVVY 199


>gi|260773267|ref|ZP_05882183.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612406|gb|EEX37609.1| leucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 858

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N +  ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYENIQYMKNQLKLLGFGYDWSREFATCRPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++++ G D +R F++          + + G++       AN     
Sbjct: 618 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLRR 671

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V + V+        +           +++     + + ++ +++  +   + A+A ++ L
Sbjct: 672 VWKLVAEHTAKGAAVAVQSDTLNADQKALRRDVHKTIAKVTDDIARRQTFNTAIAAIMEL 731

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++++ +      P   +++  DRA     +  E  + + ++L    P +  +++  L  A
Sbjct: 732 MNKLTK-----AP---QESEQDRA-----ILDEAAKAITLMLYPIAPHICFEMWQALGEA 778

Query: 481 D-ENRCFQSLDQ 491
           D +   + + D+
Sbjct: 779 DIDQATWPTYDE 790


>gi|260363864|ref|ZP_05776616.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308114636|gb|EFO52176.1| leucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 660

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEMVKTMQRNWIGRSEG 229



 Score = 37.4 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           K+SKS  N IDP E++++ G D +R F++          + + G
Sbjct: 617 KMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESG 660


>gi|238787641|ref|ZP_04631439.1| Valyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724428|gb|EEQ16070.1| Valyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 965

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGNVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTAALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSQAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|161611245|ref|YP_004677.2| isoleucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|84029575|sp|Q72JR6|SYI_THET2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1043

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 123/374 (32%), Gaps = 13/374 (3%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEGYFFRLSA 171
                +  +      +DE    + E++       +G+Y     N V W      ++    
Sbjct: 397 MYYATESWFIKNTLFKDELIRKNQEIHWVPPHIKEGRYGEWLKNLVDWALSRNRYWGTPL 456

Query: 172 YQDKLLSYYESHPEFILPIER---RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                 +  +          R      +          +       + G  +   P Y++
Sbjct: 457 PIWVCQACGKEEAIGSFQELRERATQPLPEPFDPHRPYVDQVELACECGGTMRRVP-YVI 515

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            VW D+      +  Y      +  + +PAD    G D     F++++    +L  ++  
Sbjct: 516 DVWYDSGAMPFASLHYPFEHQETFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAF 575

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +  KG+K+SKS GNV+DP ++I E G DALR+++        D  +  + +
Sbjct: 576 KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYVSAPPEADRRFGPNLV 635

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENM 405
           ++ V                   L   D   P P     E D  +L+    ++Q + E +
Sbjct: 636 RETVRDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEAL 695

Query: 406 QNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      +   +   V       Y    +    K  +            E +  +A L  
Sbjct: 696 EAYDPTTSARALRDFVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALVLVATLAA 755

Query: 464 AFVPKLANKIFDIL 477
            F P LA  ++  L
Sbjct: 756 PFTPFLAEVLWQNL 769



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 47/164 (28%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +  +       N  PH+GHA      D+  R+  + G       G D HG  +   
Sbjct: 35  KGGPRYTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELE 94

Query: 62  AQNA--GVTTKVFVDQNSRNFRDMADVLDISYDDF-----------------IRTTEKRH 102
            +      + +         F         +Y+                     T E  +
Sbjct: 95  VEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLENAYATLEPTY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + D+G +Y+      Y  R     +  EV  G  
Sbjct: 155 IESIWWSLKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYK 198


>gi|148559909|ref|YP_001258918.1| valyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371166|gb|ABQ61145.1| valyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 910

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 129/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LSWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +R  + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ESTRATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + QL  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQLYKLLHPFMPFMTEELWS 725



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|332160134|ref|YP_004296711.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664364|gb|ADZ41008.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859702|emb|CBX70038.1| valyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 965

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAANILYEFTWNQFCDWYLELAKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|317491130|ref|ZP_07949566.1| leucyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920677|gb|EFV42000.1| leucyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 860

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYDNIEYMKNQLKLLGFGYDWSREIATCDPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLENWPEQVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 99/298 (33%), Gaps = 72/298 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----------------- 279
           Y          +   A +W P D +V G +    H +Y+  F                  
Sbjct: 503 YTCPQYNEGMLNPEAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMRDAGLVNSDEPAKR 562

Query: 280 ----------------LSANLPLPKKVFSHGFILHKGE------------------KISK 305
                           ++        V        KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTGVNGERNWVSPVDVTVERDEKGRIIKAVDNEGREVVYAGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V    +    +  +     E  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTQKGACVDLSVAGLNEDQKALRRDLHKTIAKVSDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                A+ P   ++T  DRA     +  E +  +  +L  F P  + +++  L    +
Sbjct: 737 -----ARAP---QETEQDRA-----LMQEALLAVVRMLYPFTPHASFEMWTALGGEGD 781


>gi|56697855|ref|YP_168226.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81819951|sp|Q5LP30|SYV_SILPO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56679592|gb|AAV96258.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 1020

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 22/269 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           + +  DP  ++  W  +    + T G+ ++ D    +++P  + + G DIL F    W A
Sbjct: 577 VSLTRDPD-VLDTWFSSGLWPIGTLGWPEDTD-EMRRYFPTSVLITGFDILFF----WVA 630

Query: 278 FLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L +  +V  H   L       KG+K+SK+ GNVIDP+E+++E G DALR+    
Sbjct: 631 RMMMMQLAVVDQVPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADALRFTNAS 690

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESD 387
             A G      K+ +      +    + N + R   M     D +     A        +
Sbjct: 691 MAAIGGVLKLSKERI--TGYRNFTTKLWNAI-RFAEMNEVFTDAVPQLSAAELAPKAAVN 747

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
             I+   +RV +E+   + +   + A   + + V     D Y +  KP  L+  + +  +
Sbjct: 748 RWIIGETARVREEVDAALDSYRFNDAANALYAFVWGKVCDWYVELSKP-LLQGEDTEAQA 806

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                   V+ Q  +LL   +P +  +++
Sbjct: 807 ETRATMRWVMDQCLVLLHPIMPFITEELW 835



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 56/182 (30%), Gaps = 34/182 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D  G       +    
Sbjct: 39  TIMIPPPNVTGALHVGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMQVEKMLA 98

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLDISYD---------------DFI 95
            T+                  +  Q      +    L  S D                  
Sbjct: 99  ATQQPSRRELGREEFLKKVWEWKGQYGGTIVEQLKRLGASCDWSRNAFTMAGAAGDPRTG 158

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  + +KG IY+G     +    E   +D EV       +      
Sbjct: 159 HENSPNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 218

Query: 156 PV 157
           P+
Sbjct: 219 PL 220


>gi|187918595|ref|YP_001884158.1| valyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119861443|gb|AAX17238.1| valyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 874

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 142/397 (35%), Gaps = 46/397 (11%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +D+ +  D + +K   G Y +     ++      +F R+    D  L    +      P 
Sbjct: 327 KDQGFLIDVKSHKHQVG-YCHRSGEIIEPYLSNQWFVRMKPLADAALKALINGEIKFYPK 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------- 221
           +  N         +KD  +SR+   WG +IP                             
Sbjct: 386 KWENT-YKHWLLNIKDWCISRQLV-WGHRIPAWYDVKTGEIIVSESDPSLSEEHKERSFV 443

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +     ++ G+ +        ++P +  +   DI+ F    +      
Sbjct: 444 RDPD-VLDTWFSSWLWPFSSLGWPEITL-DFKNYYPTNTLITAYDIIFFWVARMVMAGLE 501

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
            +  +P      +      KG+K+SKSLGN IDP+E+I++ G DALR+ L      G+D 
Sbjct: 502 FTGQVPFKDIYITPLLRDKKGKKMSKSLGNGIDPLEIIDQYGSDALRFTLAFLSVQGQDL 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVL 398
             D                 N V  +   IL + +  ++       + D+ +L+  +  +
Sbjct: 562 NIDTKDFM------FGAKFSNKVFNASKFILSNLEGRVVLDRLELDDIDKWLLTSLNSTV 615

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
             +    +N   + A   V         D Y +  K   L   + +  + ++   V  ++
Sbjct: 616 AILDWAFKNYKYNEATKAVYEFFWNDFCDWYIEISK-INLNSDDINLQNMIISKLVFFLK 674

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           +   ++  F+P +  +I+  L    +    +   + +
Sbjct: 675 ESLRIMHPFIPFITEEIYSKLMSLKDVLALEKYPEFI 711



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  +           H+GHA    + D+L R+ R+ G + L+  GTD  G       +  
Sbjct: 37  RFSMVAPPPNVTGILHMGHALNFTLQDILVRYKRMQGANTLWLFGTDHAGIATQAVFEKQ 96

Query: 66  ---------GVTTKVFV-------DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                      + + FV       +++     +  + L  SYD      T +        
Sbjct: 97  LKDFGKSKDDFSREEFVEEIFKLKNKHREIIVNQIEKLGASYDHSRERFTLDAGLSQAVN 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  + +KG IYKG Y         +  +D+EV  
Sbjct: 157 KVFIDLYNKGLIYKGEYLVNLDPGSGSVVSDEEVEY 192


>gi|257468736|ref|ZP_05632830.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062990|ref|ZP_07927475.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688666|gb|EFS25501.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 1038

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/458 (14%), Positives = 148/458 (32%), Gaps = 18/458 (3%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    D  G+          +   VF  +  ++     +   + +D  +     
Sbjct: 330 RKYDLPFVQLVDSKGEMTE-----ETLWPGVFCKKADKDILKTLEQNGLLFDAPVFEHNY 384

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            H   C       + +    K        +R+    N      G  G++ +   N   W 
Sbjct: 385 PHCWRCDTPLIYYARESWFIKMTAVKEDLIRNNDTINWIPKTIG-KGRFGDWLENVQDWG 443

Query: 161 EEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                ++      ++ +    +       L     N   +         +++      G 
Sbjct: 444 ISRNRYWGTPLNVWECECGHNHAIGSIEELKSMSPNCPENIELHRPYIDAVTITCPHCGK 503

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++   P+ ++  W D+ +       Y         K +PAD      D     F+++   
Sbjct: 504 QMTRVPE-VIDCWFDSGSMPFAQHHYPFENKDLFEKQFPADFISEAVDQTRGWFYSLLAI 562

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + L+    P    +         G+K+SKS GN +DP + +   G DA+R++     A  
Sbjct: 563 STLIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALATYGADAIRWYFYINSAPW 622

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVC 394
               +    +++     +A          +   +  +D           T  D+ +LS  
Sbjct: 623 LPNRFHGKAVQEGQRKFMATLWNTYAFFVLYAEIDQFDATKYTLDKDKLTVMDKWLLSKL 682

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVT 451
           + V++ + EN+ +  +  A   +   V E+ + Y     ++ W    T+     T     
Sbjct: 683 NTVVKGVDENLADYKLLEAARLLQDFVDELSNWYVRRSRERFWVQDMTDDKI--TAYMTL 740

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              +  ++      +P +  +I+  L  + +    +S+
Sbjct: 741 YTALVTISKAAAPMIPFMTEEIYRNLVCSIDKNAPESI 778



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G DV    G D HG  +   
Sbjct: 36  KGDKTYTFYDGPPTANGKPHIGHVLTRVIKDMVPRYRTMKGYDVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      ++   T +   
Sbjct: 96  VEKLLGINGKDQIESYGLQPFIEECKTSVWKYKGMWEDFSKTVGFWADMENPYVTYDNNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I +K  +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 156 IESEWWALKQIWEKDLLYKGFKIVPYCPRCGTPLSSHEVAQGYKDVKERSAIVRFKVKDE 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DAYILAWT 223


>gi|150390081|ref|YP_001320130.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|229559881|sp|A6TQK3|SYL_ALKMQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149949943|gb|ABR48471.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 824

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 28  RDRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKRMKGYNVLHPMGWDSFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N +  ++  D L +SY  D  + T    ++   + L+ +   KG  
Sbjct: 88  AIKHGIHPDHWTKENVKEMKEQLDALGLSYDWDREVSTCTPEYYKWTQWLFLQFYHKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V  G      +   + V       ++F+++ Y + LL  
Sbjct: 148 YKKESQVNWCPSCETVLANEQVVNG----GCDRCDSSVGKKNLNQWYFKITDYAEALLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   +       G
Sbjct: 204 IKLLDGWPEKVKTMQQNWIGKSHG 227



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 25/272 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y              A +W P D ++ G +    H +Y   
Sbjct: 489 KRETDTMDTFVDSSWYFLRYTDANNEQLPFSKEAANYWVPVDQYIGGVEHAILHLLYSRF 548

Query: 278 FLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           F                KK+ + G +L  G K+SKS GNV+ P E+I++ G D  R F++
Sbjct: 549 FTKVMKDLGLTDQPEPFKKLLTQGMVLKDGAKMSKSKGNVVSPEEIIQKYGADTARLFVL 608

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +   G++        N +  L       I  +         A T+ D+ +
Sbjct: 609 FAAPPERDLEWSDQGVEGSYR--FLNRVWRLAE---EFIDNNLFMSTSLGEALTKRDKDL 663

Query: 391 LSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                  ++++  +++     + A++ V+ L++E+ +Y         K+T+P + +    
Sbjct: 664 KYTIHYTIKKVTSDVEDRFNFNTAISAVMELINELYKY---------KETDPSKLN--GD 712

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  E I    +LL  F P    ++++ L  A+
Sbjct: 713 LFREGIETSILLLAPFAPHFTEELWEKLGKAE 744


>gi|310816641|ref|YP_003964605.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755376|gb|ADO43305.1| valyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 1028

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 12/279 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  D   ++  W  +    + T G+ +      AK++P ++ V G DI+ F    +   
Sbjct: 588 PVWRDAD-VLDTWFSSGLWPIGTLGWPEQTP-ELAKYFPTNVLVTGFDIIFFWVARMMMM 645

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +  ++P             KG+K+SKSLGNV+DP+ +I+E G DA+R+ L    A G
Sbjct: 646 QLAVVDDVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLVLIDEYGADAVRFTLTAMAAMG 705

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSVC 394
           +D       +      +    + N   R   M  +          P A    +  I+   
Sbjct: 706 RDLKLSTQRIAG--YRNFGTKLWN-AHRFAEMNDVFAARPADGQAPRASQTVNRWIIGET 762

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +RV +E+   + +     A   + + V     D Y +  KP  L   +            
Sbjct: 763 ARVREEVDAALDSYRFDVAANALYAFVWGKVCDWYVEFSKP-LLSGEDIAARDETRATMA 821

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            V+ Q  +LL   +P +  +++      D          
Sbjct: 822 WVLDQCLVLLHPIMPFVTEELWQTTGQRDRLLALSDWPT 860



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 20/171 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFSIVIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVER 95

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
                                   + +Q+          L  S  +D    T ++     
Sbjct: 96  ELAKAGLPGRREMGREAFLDKVWEWKEQSGGTIIQQLKRLGASCDWDRNAFTMDEHFQKA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHN 155
              ++ ++  KG IY+G     +    E   +D EV      G  ++ ++ 
Sbjct: 156 VIKVFVEMYAKGLIYRGKRLVNWDPHFETAISDLEVENVEVAGHMWHFKYK 206


>gi|319790327|ref|YP_004151960.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114829|gb|ADU97319.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 917

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 6/206 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +++K Y      YP+ + H+GH     I DV+ARF RL G +VL   G D  G     
Sbjct: 26  VSDKKKFYCLEMFPYPSGKIHMGHVRNYSIGDVIARFKRLAGFNVLHPMGWDAFGLPAEN 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA  +GV  + +   N  N ++    L  SYD    + T    ++   + ++ K+ +KG 
Sbjct: 86  AAIKSGVHPREWTLSNIENMKEELKRLGFSYDWEREVTTCSPEYYRWNQWIFLKMLEKGI 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   S  +    +    +++V    +          V+  E + +F +++ Y ++LL 
Sbjct: 146 AYRAKASVNWCPSCQTVLANEQV---DEEGRCWRCGTTVEQREIDSWFLKITDYAEELLR 202

Query: 179 YYESHP-EFILPIERRNEVISFVKSG 203
             E     +  P+            G
Sbjct: 203 DLELLKGHWPDPVITMQRNWIGKSVG 228



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 77/182 (42%), Gaps = 19/182 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N+++P ++I + G DA R +++       +  +  +G++      L      
Sbjct: 674 SKMSKSKLNIVNPSDMIAKYGADATRLYVLFAAPPESEFEWKSEGIEGAY-RFLRRLFQF 732

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
           +  R+  +           P   ++  +++     + L+++ E +      + A+A V+ 
Sbjct: 733 VAERAQELKAA----QALNPEKLSKEGKNLRKKAHQTLKKVTEELSGRFKFNTAVAAVME 788

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L +       + KP    +T  DRA+       E +     +L  F P L+ +++++L  
Sbjct: 789 LFNR----VTSFKP----ETEADRAA-----LKEAVELTVTMLYPFTPHLSEELWEMLGH 835

Query: 480 AD 481
            +
Sbjct: 836 KE 837


>gi|318607300|emb|CBY28798.1| valyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 965

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGKVYVGRDEAEVRRENNLGADVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAANILYEFTWNQFCDWYLELAKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  +EV+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIEVLEALLRLAHPIIPYITETIWQR 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|308186026|ref|YP_003930157.1| Leucyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056536|gb|ADO08708.1| Leucyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 860

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   ++           G
Sbjct: 206 LDTLEEWPEQVKTMQRNWIGRSEG 229



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 78/195 (40%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V + V         +     +  +  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWKLVYEHTSQGATVALDVQSLNDEQKSLRRDLHKTIAKVADDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   +++  DRA     +  E +  +  LL  F P     ++  L  
Sbjct: 732 LMNKL-----ARAP---QESEQDRA-----LMQEALLAIVRLLYPFTPHACYVLWQTLGG 778

Query: 480 AD--ENRCFQSLDQR 492
               +   +   D+ 
Sbjct: 779 EGTIDEASWPVADEA 793


>gi|301059426|ref|ZP_07200347.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446462|gb|EFK10306.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 1011

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + HIGH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 182 SREKYYLLEMFPYPSGKIHIGHVRNYTIGDVVARYKKMCGKNVLHPMGWDAFGMPAENAA 241

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N  N +     +  SY  D  + T +  ++   ++++ ++ +KG  Y
Sbjct: 242 IENNTHPAKWTYENIENMKAQLKRMGFSYDWDRELATCDPDYYRWEQLVFLEMYEKGLAY 301

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    DG  +      V   E   +F +++ Y + +L Y 
Sbjct: 302 RKKTHVNWCEKCQTVLANEQV---EDGCCWRHPEQEVAIKEMNSWFLKITDYAEDMLEYC 358

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E  P +   +    +       G
Sbjct: 359 EKLPGWPDRVLSMQKNWIGKSHG 381



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 102/283 (36%), Gaps = 57/283 (20%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------------------ 278
           Y          D ++  +W P D ++ G +    H +Y   +                  
Sbjct: 662 YACPDYQDGPLDATRVDYWLPVDQYIGGIEHAILHLLYSRFYTRVLKDLGHIGIKEPFTN 721

Query: 279 -------------LLSANLPLPKKVFSHGFILHKGE-------KISKSLGNVIDPIEVIE 318
                                PK+V +        E       K+SKS  NV+DP E+I+
Sbjct: 722 LLTQGMVCKATQACSQHGYLFPKEVENDRCTRCGAEVINGNIVKMSKSKKNVVDPQELID 781

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS--MILKDYDGM 376
             G D +R F +      KD  + + G++          I  LV+ ++     +K +D  
Sbjct: 782 RYGADTVRMFCLFASPPDKDLEWSEQGVEGSHR--FLQRIWRLVTDNLEDLKTVKGFD-- 837

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWE 435
                   E  +S+       ++++ ++++N    + A++ V+ LV+E +++ +      
Sbjct: 838 --EKTELQEPLKSVHRKTHETIKKVTDDIENRFHFNTAISAVMELVNETNQFLN------ 889

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              T   R +    V    +    ILL   VP + + ++ ++ 
Sbjct: 890 ---TGEQRDAAAWAVVRRAVETTIILLSPVVPHITDHLWQLMG 929


>gi|242240958|ref|YP_002989139.1| valyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242133015|gb|ACS87317.1| valyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 951

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 121/360 (33%), Gaps = 55/360 (15%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQYI 227
            S  +D           +   I    +    V  G  +  + R    + GI +  D   +
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDDNGNVYVGRDEAEVRRDNNLEAGIALRQDDD-V 472

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----- 282
           +  W  +     +T G+ +     KA   P+ + V G DI+ F         +       
Sbjct: 473 LDTWFSSALWTFSTLGWPEQTPELKAFH-PSSVMVSGFDIIFFWIARMIMMTMHFIKDED 531

Query: 283 ---NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV------------------- 320
               +P      +      +G+K+SKS GNVIDP+++++ +                   
Sbjct: 532 GKPQVPFHTVYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLA 591

Query: 321 ------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DALR+ L    + G+D  +D   L+     +  N + N  
Sbjct: 592 EKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-A 648

Query: 363 SRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           SR V M  +  D    +     + +D  IL+  +R ++  RE +       A   +    
Sbjct: 649 SRFVLMNTEGQDCGFNSGENVLSLADRWILAEFNRTVKAYREALDGYRFDLAANVLYEFT 708

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D Y +  KP  +   +        +  V V+  L  L    +P +   I+  + V
Sbjct: 709 WNQFCDWYLELTKP-VMNGGSEAELRGTRHTLVTVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKDSFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTK-------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +      +               + Q             R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKNRHDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPL 204


>gi|240102739|ref|YP_002959048.1| valyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910293|gb|ACS33184.1| Valyl-tRNA synthetase (valS) [Thermococcus gammatolerans EJ3]
          Length = 888

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 16/262 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y  +  +
Sbjct: 451 VLDCWVDSSITPLIITRWHEAIKGDGEAKRWFEHNFPTALRPQGTDIIRTWAFYTIFRTY 510

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    + +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 511 MLTGQKPWKDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALA-PPGED 569

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     L+D+D     P      D  ILS   R++
Sbjct: 570 HPFKWETVD--YNFRFLQKVWN-IYRFAERHLEDFDPAK-APEELEPLDRWILSRLHRLI 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E M+    +    ++I+ V     D Y +  K + L   + +          E++ 
Sbjct: 626 KFATEEMERYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKAALYELLY 684

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +++  LF
Sbjct: 685 NVMLLLAPFVPHITEELYQNLF 706



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  EKRPSYAIDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMTGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNA----GVTTK-------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +          +        +  Q     R+    +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGISKDEPEKFLQKCVEWTWQAIEAMRNQFIRIGYSADWDLEYHTMDDWYKAAVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +   KG +Y+  +  ++  R        EV  
Sbjct: 151 SLIEFYKKGLLYQAEHPVYWCPRCRTSLAKAEVGY 185


>gi|254283790|ref|ZP_04958758.1| leucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219679993|gb|EED36342.1| leucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 813

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE  Y      YP+ + H+GH     IADV+ARF R+ G +VL   G D  G     AA
Sbjct: 30  SRETFYCLAMFPYPSGKLHMGHVRNYTIADVIARFQRMQGKNVLQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  + R     L  +YD      T    ++   +  + ++ DKG  Y
Sbjct: 90  IKNNVPPADWTLGNIDDMRTQLSRLGFAYDWSREFATCTPEYYRWEQWFFTRLIDKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G          NPV+      +F R++AY  +LL   
Sbjct: 150 KKEADVNWCETDQTVLANEQVVNG----RCWRCDNPVERRSISQWFIRITAYAQELLDQL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 206 DGLDGWPEQVKAMQRNWIGRSEG 228



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 120/362 (33%), Gaps = 47/362 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G      A    +L    +      P++R  E  +    
Sbjct: 418 WGVSRQRYWGAPIPVINCERCGAVPVPEADLPVVLPTDVAFEGVGSPLKRMPEFRN---- 473

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD 259
                         G     +       ++++   Y        +     A+   + P D
Sbjct: 474 --------APCPTCGEPATRETD-TFDTFMESSWYYARFASAGSDNAMLDAEADRWLPVD 524

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            +V G +    H +Y   F            + P  K++ + G +L  G K+SKS GN +
Sbjct: 525 QYVGGIEHAILHLLYARFFHKLMRDEGLVSSDEPF-KRLLTQGMVLKDGAKMSKSKGNTV 583

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP  +I++ G D +R F +      +   +   G++          +  LVS + S    
Sbjct: 584 DPQALIDQYGADTVRLFSMFAAPPDQSLEWSDSGVEGGHR--FLKRLWRLVSEATSRSTD 641

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDA 430
             D      G      + +       + ++ ++   +   + A+A V+ L +E+ R    
Sbjct: 642 TLDTADLNNGQ-----KDLRRKTHETIAKVSDDYGRRQTFNTAIAAVMELCNEIGR---- 692

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSL 489
                    +P  +     V  E +R    +L   VP ++  ++      D     +  +
Sbjct: 693 ---------HPQESDADHAVIDEALRAALQMLSPVVPHISEHLWREFTGEDIATAGWPDV 743

Query: 490 DQ 491
           D+
Sbjct: 744 DE 745


>gi|323702369|ref|ZP_08114034.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532675|gb|EGB22549.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 827

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R K Y      YP+ + H+GH     I DV+ARF  + G  VL   G D  G     A
Sbjct: 30  SDRPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKNMQGYHVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N  + R     L +SYD    + T    ++   + L+ ++  +G  
Sbjct: 90  AIKNGIPPATWTWDNIAHMRSQLKQLGLSYDWQREVATCHPEYYKWGQWLFLQLYKRGLC 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V +G            V+  E + +FFR++ Y  +LL  
Sbjct: 150 YKKHARVNWCPDCATVLANEQVVEG----GCERCGATVEQRELDQWFFRITDYAQRLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 206 LKLLEGWPDKVKIMQENWIGRSEG 229



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 101/276 (36%), Gaps = 39/276 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAF 278
           D              Y +        D  KA  W   D ++ G +    H +Y   +   
Sbjct: 494 DTMDTFVDSSWYYLRYTSPRDTEQAWDKQKANHWMSVDQYIGGVEHAILHLLYSRFFTKV 553

Query: 279 LLSANL----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L       K + + G +L  G K+SKS GNV+ P E+++  G D  R F++    
Sbjct: 554 FYDLGLVDVQEPFKNLLTQGMVLKDGAKMSKSKGNVVSPEEIVDRYGADTARLFILFAAP 613

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-----ES 389
             +D  +   G++              ++R   ++    D +   P    +++     + 
Sbjct: 614 PERDLEWSDRGVEGS---------HRFLNRVWRLVYSVKDEVAAAPAIDPKANFVGVHKE 664

Query: 390 ILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +  +    ++++ E++      + A++ ++ LV+ +  Y              D+ + V 
Sbjct: 665 MRRLTHYAIKKVTEDVSGRFNFNTAISTIMELVNGIYTY-------------RDKVAAVE 711

Query: 449 ---YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               V  E I  + ILL  F P ++ +++      +
Sbjct: 712 RNSSVLAEAINSMIILLAPFAPHISEELWAATGHKE 747


>gi|307244136|ref|ZP_07526254.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492507|gb|EFM64542.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 1040

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 79/460 (17%), Positives = 166/460 (36%), Gaps = 34/460 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFI 95
           ++     ++ F    D  G+  A        T              ++   L      F 
Sbjct: 332 YNLGRAYELAFVQPVDSEGKFTA--------TPWKGKFVMEEGLDVEIIKWLAAENKLFS 383

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           +   + ++  C      +        G Y     L+ +   N++ V    +        N
Sbjct: 384 KLKVEHNYPHCWRCSTPL--VYYANPGWYLEMTKLKGKLIENNNGVNWFPEFVGEGRFGN 441

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE--VISFVKSGLKDLSLSRKT 213
            ++  E + +    + Y    L  ++        +  R E   ++      K + L R  
Sbjct: 442 WLE--ELKDWAISRTRYWGTPLPVWKCECGCKTTVGSREELAKLAVEDVDPKTIELHRPY 499

Query: 214 FDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
            D       D          ++  W D+         Y      +  + +PAD    G D
Sbjct: 500 IDEVHLKCPDCGGTMTRVTEVIDCWFDSGAMPFAQWHYPFENKENFDELFPADYICEGID 559

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+++   +  ++   P    + +   +   G+K+SKS GN I+P E+ E+ G DA
Sbjct: 560 QTRGWFYSLLAVSTFVTGKSPYKNVLVTDLVLDKNGKKMSKSKGNTINPFEMFEKYGADA 619

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           LR++L+          +D+DGLK+ + +     + N  +     +  + DG+ P      
Sbjct: 620 LRWYLLYVSPPWTPLRFDEDGLKEIM-SKFIGTLKNTYNFFT--LYANTDGLNPNDFFVE 676

Query: 381 -GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
                E D  ILS  + + +EI EN++   +++++ ++   +++   + Y    +     
Sbjct: 677 YKDRPELDRWILSKFNNLKKEIEENLEIFEVNKSIRRMTEFLNDDLSNWYIRRSRRRFWG 736

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +   +V   T EV+R    ++  F P L+ +++  L
Sbjct: 737 TELTEDKKSVYNTTYEVLRDFCKMIAPFSPYLSEEMYRNL 776



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 50/164 (30%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 40  ENDPTYVFFEGPPTANGNPGIHHVISRTLKDWVCRYKTMSGYKVPRKAGWDTHGLPVELQ 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRH 102
            +                       +  V    + +R M++     I  DD   T +  +
Sbjct: 100 VEKELGLSDKKAIEEYGIEEFCHKCRDSVFTYEKEWRRMSERMAYAIDLDDPYITLDNDY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +  K + +G +Y+G     Y  R        EV +G  
Sbjct: 160 IESLWWILDKFNKEGLLYEGHKILPYCPRCGTGLASHEVAQGYK 203


>gi|46196634|gb|AAS81050.1| isoleucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 1067

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 123/374 (32%), Gaps = 13/374 (3%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEGYFFRLSA 171
                +  +      +DE    + E++       +G+Y     N V W      ++    
Sbjct: 421 MYYATESWFIKNTLFKDELIRKNQEIHWVPPHIKEGRYGEWLKNLVDWALSRNRYWGTPL 480

Query: 172 YQDKLLSYYESHPEFILPIER---RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                 +  +          R      +          +       + G  +   P Y++
Sbjct: 481 PIWVCQACGKEEAIGSFQELRERATQPLPEPFDPHRPYVDQVELACECGGTMRRVP-YVI 539

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            VW D+      +  Y      +  + +PAD    G D     F++++    +L  ++  
Sbjct: 540 DVWYDSGAMPFASLHYPFEHQETFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAF 599

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +  KG+K+SKS GNV+DP ++I E G DALR+++        D  +  + +
Sbjct: 600 KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYVSAPPEADRRFGPNLV 659

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENM 405
           ++ V                   L   D   P P     E D  +L+    ++Q + E +
Sbjct: 660 RETVRDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEAL 719

Query: 406 QNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      +   +   V       Y    +    K  +            E +  +A L  
Sbjct: 720 EAYDPTTSARALRDFVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALVLVATLAA 779

Query: 464 AFVPKLANKIFDIL 477
            F P LA  ++  L
Sbjct: 780 PFTPFLAEVLWQNL 793



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 47/164 (28%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +  +       N  PH+GHA      D+  R+  + G       G D HG  +   
Sbjct: 59  KGGPRYTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELE 118

Query: 62  AQNA--GVTTKVFVDQNSRNFRDMADVLDISYDDF-----------------IRTTEKRH 102
            +      + +         F         +Y+                     T E  +
Sbjct: 119 VEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLENAYATLEPTY 178

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + D+G +Y+      Y  R     +  EV  G  
Sbjct: 179 IESIWWSLKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYK 222


>gi|33241293|ref|NP_876235.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|81663879|sp|Q7V9I9|SYV_PROMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33238823|gb|AAQ00888.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 933

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 136/379 (35%), Gaps = 61/379 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F R+    ++  S+         P  R  +V     +G++D  +SR+   
Sbjct: 369 PIEPLLSTQWFVRMEPMAERCRSHLGKDEPRFYPD-RWAKVYRDWLTGIRDWCISRQ-LW 426

Query: 216 WGIKIP-----------------------------------------DDPQYIMYVWIDA 234
           WG +IP                                            + ++  W  +
Sbjct: 427 WGHRIPAWFVVSETNNELTDDTPYIVALSEKDALLEAQKKYGTDAVLRQDEDVLDTWFSS 486

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
                +T G+ D  +   ++++P +  V G DI+ F    +   A   +  +P       
Sbjct: 487 GLWPFSTLGWPDKTNADLSRWYPTNTLVTGFDIIFFWVARMTMMAGAFTGKMPFADVYIH 546

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-RV 350
                 +  K+SKS GN IDP+ +I+  G DALR+ LV+E+A  G+D   D D  K    
Sbjct: 547 GLVRDEQNRKMSKSAGNGIDPLLLIDRYGTDALRFALVKEVAGAGQDIRIDYDRAKDTSA 606

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTP-------GAFTESDESILSVCSRVLQEIRE 403
             + A    N +  +    L +                    SD+ ILS  S+V  E  +
Sbjct: 607 TVEAARNFANKLWNATRFALINLGDTTFKETFDELEHNRLELSDQWILSKLSKVNNETAK 666

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA-----STVLYVTVEVIR 456
             +   +  A   +         D Y +  K       +P  A          V  +V+R
Sbjct: 667 RYKKYALGEAAKGLYEFAWNDFCDWYLELIKRRLNLGESPSEADLSNRKKSQIVMFKVLR 726

Query: 457 QLAILLQAFVPKLANKIFD 475
           +L +++   +P L  +++ 
Sbjct: 727 ELLVMMHPLMPHLTEELWH 745



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 18/180 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   +           H+GHA+   + D + RF RL G +VL   GTD     +    
Sbjct: 47  EGEPFSVVIPPPNVTGSLHMGHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASIAVQTIL 106

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        +  ++     +    L  S D      T + R   
Sbjct: 107 EKQLKKEGLTRDELGRSAFLERAWAWKSESGGRIVEQLRRLGYSVDWKRERFTMDTRLSK 166

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                + ++  +G IY+G Y   +     +  +D EV       Y      P+  + +  
Sbjct: 167 AVSEAFVRLHQQGLIYRGEYLVNWCPASSSAVSDLEVETKEVDGYLWHFQYPLSKINDSN 226


>gi|42567891|ref|NP_568337.3| EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA
           ligase/ nucleotide binding / valine-tRNA ligase
           [Arabidopsis thaliana]
          Length = 970

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 120/358 (33%), Gaps = 22/358 (6%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  +   E     KS  + L  + + 
Sbjct: 445 PERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYVVGKDCEEDYIVAKSAEEALEKALEK 504

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
           +   ++I  DP  ++  W  +     +T G+ D        F+P ++   G DIL F   
Sbjct: 505 YGKDVEIYQDPD-VLDTWFSSSLWPFSTLGWPDVAAKDFNNFYPTNMLETGHDILFFWVA 563

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +       +  +P             +G K+SKSLGNVIDP++ I++ G DALR+ +  
Sbjct: 564 RMVMMGIEFTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTIKDFGTDALRFTIAL 623

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE--- 388
             A G+D     + L    N    N + N     +  +    D          + D+   
Sbjct: 624 GTA-GQDLNLSTERLTA--NKAFTNKLWNAGKFVLHSLPSLSDTSAWENLLDLKLDKEET 680

Query: 389 ---------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                      +S    ++  +  + +         +          D Y +A K     
Sbjct: 681 LLSLPLPECWAVSKLHILIDSVTASYEKLFFGDVGRETYDFFWSDFADWYIEASKSRLYG 740

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                 +     V + V   +  LL  F+P +   ++  L    E        Q   P
Sbjct: 741 SGGNSVSLASQAVLLYVFENILKLLHPFMPFVTEDLWQALPYRKEALIVSPWPQNSLP 798



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 22/158 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA  + + D++ R++R++G   L+  GTD  G       +  
Sbjct: 101 PFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKM 160

Query: 66  GVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             +            F  +                + +    D S + F  T +++    
Sbjct: 161 LASEGIKRVDLGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERF--TLDEQLSRA 218

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + K+ DKG IY+G Y   +S   +   +D EV  
Sbjct: 219 VVEAFVKLHDKGLIYQGSYMVNWSPNLQTAVSDLEVEY 256


>gi|119357784|ref|YP_912428.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355133|gb|ABL66004.1| Isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 1086

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/288 (20%), Positives = 109/288 (37%), Gaps = 11/288 (3%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
           S      G +    P+ +  VW D+ +       Y         + +PAD    G D   
Sbjct: 532 SIYFIREGKRFTRTPELV-DVWFDSGSMPFAQLHYPFENKEEFDRTFPADFIAEGVDQTR 590

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ ++  A LL         + +   +   G K+SKS GNV+DP E ++  G DALR+
Sbjct: 591 GWFYTLHAVATLLFDCPAYKNLIVNGHILDKNGHKMSKSKGNVVDPFETMQRYGADALRW 650

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTE 385
           +L+      +   ++ D +++         I +     +   +  +    P       +E
Sbjct: 651 YLIATSPPWRPKSFNTDEIEEEQRKFFRAYINSYNFFVLYANVDAFTHTEPDIPLQDRSE 710

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNP 441
            D  ILS  + +   +RE M+   +  A+  +         + Y     ++ W+  +  P
Sbjct: 711 LDRWILSSLNTLSSGVRERMEQYDLTGAVRLLNDFAVDDLSNWYIRRSRKRFWK-SEMGP 769

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           D+ +         +   A LL  F P LA +IF  L         +S+
Sbjct: 770 DKLAA-YQTLYTCLVTTAKLLAPFTPFLAERIFLNLNRVSGFEALESV 816



 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--------- 63
               N +P + H +   I D++ R+  + G  V    G D HG  +  + +         
Sbjct: 50  PPTVNGKPGVHHVFSRTIKDIVCRYRTMQGYLVPRKAGWDTHGLPVEISVEKKLGLKNRS 109

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
                        A       +D N   +  + + +   +  D    T    + ++    
Sbjct: 110 QVEDYGEDEFNKEARALVYHHIDDNREGWGKLTERMGYWVDMDKPYITCTNNYIESVWWA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 170 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 206


>gi|68165416|gb|AAY87668.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165418|gb|AAY87669.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165420|gb|AAY87670.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165422|gb|AAY87671.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165424|gb|AAY87672.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165426|gb|AAY87673.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165428|gb|AAY87674.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165430|gb|AAY87675.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165432|gb|AAY87676.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165434|gb|AAY87677.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165436|gb|AAY87678.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165438|gb|AAY87679.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165440|gb|AAY87680.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165442|gb|AAY87681.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165444|gb|AAY87682.1| methionyl-tRNA synthetase [Vibrio cholerae]
 gi|68165446|gb|AAY87683.1| methionyl-tRNA synthetase [Vibrio cholerae]
          Length = 269

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 28/262 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  KL ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   A
Sbjct: 3   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 62

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           Q  G+T +  ++  S   +      DIS+D++  T    + +    ++ ++   G I   
Sbjct: 63  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 122

Query: 123 CYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQ------------- 158
             S  +    E +  D            E   G +       ++P +             
Sbjct: 123 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 182

Query: 159 -WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E +FF L  ++  L  +  S     L  E  N++  + + GL+   +SR    +G
Sbjct: 183 VMKDSEHFFFDLPQFESMLKEWTRSGS---LQSETANKMQEWFEGGLQQWDISRDAPYFG 239

Query: 218 IKIPDDPQYIMYVWIDALTNYL 239
            +IP +     YVW+DA   Y+
Sbjct: 240 FEIPGEKDKFFYVWLDAPIGYM 261


>gi|145636946|ref|ZP_01792610.1| leucyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269804|gb|EDK09743.1| leucyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 434

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPFGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +           +D  I T +  ++   +  + ++  KG +
Sbjct: 90  AIKNKTAPAKWTYENIAYMKKQLQLLGFGFDWDREIATCKPDYYKWEQWFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V++G           PV+  E   +F +++ Y ++LL  
Sbjct: 150 YKKTSTVNWCPNDETVLANEQVHEG----CCWRCDTPVEQKEIPQWFIKITDYAEQLLGG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++           G
Sbjct: 206 LDTLPQWPDMVKTMQRNWIGRSEG 229


>gi|110596914|ref|ZP_01385204.1| valyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341601|gb|EAT60061.1| valyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 903

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 124/375 (33%), Gaps = 47/375 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F R++   +K L           P    N         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVRMAPLAEKALQVVNDGDIRFHPPHWINT-YRHWMENIRDWCISRQ-LWW 420

Query: 217 G--IKIPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNP- 248
           G  I    D                            ++  W  +    LTT G+ D   
Sbjct: 421 GHRIPAWYDSEGRVWVAASFEEACHLAGTDKLVQDDDVLDTWFSSWLWPLTTLGWTDRHS 480

Query: 249 -DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P +  V G DI+ F    +          +P     F+      KG K+SK
Sbjct: 481 DNADLRAFYPTNTLVTGPDIIFFWVARMIMAGLYFKGEVPFRDVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ ++     G+D  + ++  +  +  + A  I N     
Sbjct: 541 SLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEEKCE--LGRNFATKIWNATRLV 598

Query: 366 VSMILKDYDGMIPTPGAFTESD----------ESILSVCSRVLQEIRENMQNQLIHRALA 415
                K +         + E D          E +L+    +L+          ++  + 
Sbjct: 599 FMQREKYFADSEAFAAVYREFDPRSLRNDLAGEWLLASYHAMLERYHTAFAQFRLNDIVR 658

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V           Y +A K       +   A   + + V V+      L   +P + ++I
Sbjct: 659 NVYDFFWNDYCGWYLEAMKVRLSGTLSESEAQEAVCLAVHVLEGTLKALHPVMPFITDEI 718

Query: 474 FDILFVADENRCFQS 488
           +  +          S
Sbjct: 719 WHHILPRPSEESIAS 733



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +            +GH     + D+  R+ R+ G + L+  GTD  G      
Sbjct: 44  EGKTPYSVLMPPPNVTGSLTLGHVLNHTLQDIFIRYSRMTGREALWLPGTDHAGIATQTV 103

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+           L IS D    + T ++   
Sbjct: 104 VEKKLKKEGVTRHDLGRKEFLDHVWQWRDEYGGLILRQLRRLGISCDWRRNLFTMDESAS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 +  +   G IY+G     +    +   +D+EV  
Sbjct: 164 TAVINAFIALYRDGLIYRGTRIINWCPVSQTALSDEEVIM 203


>gi|254452559|ref|ZP_05065996.1| valyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198266965|gb|EDY91235.1| valyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 1018

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/272 (22%), Positives = 110/272 (40%), Gaps = 18/272 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ ++    K K++P    + G+DIL F    +   
Sbjct: 576 PMFRDPD-VLDTWFSSGLWPIGTLGWPEDTPELK-KYFPTSDLITGQDILFFWVARMMMM 633

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +   +P             KG+K+SKS GNVIDP+++I+E G DALR+      + G
Sbjct: 634 QLAVVGEVPFNTIYLHGLVRDAKGKKMSKSTGNVIDPLDIIDEYGADALRFTNAAMASLG 693

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--------SDE 388
                D   +      +    + N   R   M        + T G             ++
Sbjct: 694 GALKLDTSRIAG--YRNFGTKLWN-ACRFAEMNGAFSTDAVHTGGVKDLYANHTSLSVNK 750

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAST 446
            I+   S+VL E+ + + N   + A   +   V     D Y +  KP  L  T+ ++A  
Sbjct: 751 WIIGETSKVLAEVDDALSNYRFNDAADALYKFVWGKVCDWYVELSKPLLLDGTDAEKAE- 809

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              V   V+ Q  ILL   +P +  +++ ++ 
Sbjct: 810 CQQVMNWVLTQSLILLHPIMPFITEELWGLMG 841



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 32/177 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+HR+ G D L+  GTD  G       +    
Sbjct: 39  CVMIPPPNVTGVLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGTDHAGIATQMVVERQLA 98

Query: 68  TT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTE--------- 99
            T                   +  ++     +    L  S  +D    T           
Sbjct: 99  ETGQPKRVELGREKFLEKVWDWKAESGGKIINQLKRLGASCDWDREAFTMSGAPGAPASA 158

Query: 100 -KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
               HD    ++ ++ +KG IY+G     +    E   +D EV     DG  ++ ++
Sbjct: 159 QGNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENVEVDGHMWHFKY 215


>gi|238791646|ref|ZP_04635284.1| Leucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238729262|gb|EEQ20778.1| Leucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 860

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDMTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            ++   +   ++           G   + D+  S +        PD    + YV + A 
Sbjct: 206 LDTLESWPEQVKTMQRNWIGRSEGVDIVFDVQDSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 111/332 (33%), Gaps = 39/332 (11%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +  Q        +   + LP+++    I      L       K     G
Sbjct: 493 FMESSWYYARYTCPQFDEGMLDPTAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAG 552

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   D+P   +      L        Y     G +    PAD  V               
Sbjct: 553 LVNSDEPAKRLLCQGMVL----ADAFYYTGTSGERIWVSPADAIVE-------------- 594

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 +        H  +     K+SKS  N IDP  ++E+ G D +R F++       
Sbjct: 595 RDEKGRIVKATDPDGHELVYAGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEM 654

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + + G++       AN     V R V               + TE  +S+     + 
Sbjct: 655 TLEWQESGVEG------ANRFLKRVWRLVFESTAKGATAPLDIASLTEEQKSLRRDLHKT 708

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A V+ L++++ R      P   ++T  DRA     +  E + 
Sbjct: 709 ITKVTDDVGRRQTFNTAIAAVMELMNKLGR-----AP---QETEQDRA-----LLQEALL 755

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            +  +L  F P +   ++  L    +      
Sbjct: 756 AVVRMLYPFTPHVCFSLWQALGGEGDIDTAPW 787


>gi|212223825|ref|YP_002307061.1| valyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008782|gb|ACJ16164.1| valyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 884

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 82/460 (17%), Positives = 156/460 (33%), Gaps = 24/460 (5%)

Query: 23  GHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD 82
           G  Y     D           ++      +E G    +A + AG+ T+       +   +
Sbjct: 263 GAVYNCTYGDEQD-VVWQKRYNLPVIIAINEDGTMNERAGKYAGMKTEEA----RKAIAE 317

Query: 83  MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
             + + + Y     T   R              +    K  +       DE     +++ 
Sbjct: 318 DLEKMGLLYKKEKITH--RVLRHTERSSCMAPIELLPKKQWFIKVKDFTDEIVKVAEKIN 375

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 +   +     W E   + + +S  +           +    +  R E +     
Sbjct: 376 WYPSDMFLRLK----DWAESMDWDWVISRQRVFGTPIPFWVCKNGHVVPAREEDLPVDPR 431

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
             K            ++   D   ++  W+D+    L  T +  +    K   +P  L  
Sbjct: 432 FDKPPVEKCPVCGAELEPVTD---VLDCWVDSSITPLIITKWGKDEKWFK-HNFPTALRP 487

Query: 263 IGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G DI+R  A Y  +  ++L+   P    + +       G K+SKS GNV+ P EVI + 
Sbjct: 488 QGTDIIRTWAFYTIFRTYVLTGEKPWDDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKY 547

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR +       G+D  +  + +    N      + N + R     L+ +D      
Sbjct: 548 GADALRLWTALA-PPGEDHPFKWETVD--YNYRFLQKVWN-IYRFAERHLEGFDPEAAKG 603

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                 D  ILS   R+++   E M+    +    ++I+ V     D Y +  K + L  
Sbjct: 604 IELEPIDRWILSRLHRLIKFATEEMEKYRFNLLTRELITFVWHEVADDYIEMIK-YRLYG 662

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + +          E++  + +LL  FVP +  +++  LF
Sbjct: 663 DDEESKLKAKVALYELLYNVMLLLAPFVPHVTEELYQNLF 702



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  EKRPSYAIDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMTGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNA-----------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +                   +  Q     R+    +  S  +D    T +  +  T + 
Sbjct: 91  VEKEFGISKDQPEKFLQKCVEWTWQAIEAMRNQFIRIGYSADWDLEYHTMDDWYKATVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +   KG +Y+  +  ++  R        EV  
Sbjct: 151 SLLEFYKKGMLYRDEHPVYWCPRCRTSLAKAEVGY 185


>gi|14521851|ref|NP_127327.1| valyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|12585356|sp|Q9UY55|SYV_PYRAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|5459071|emb|CAB50557.1| valS valyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 891

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y  +  F
Sbjct: 453 VLDCWVDSSITPLIITRWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTF 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 KLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALA-PPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D  ILS   R++
Sbjct: 572 HPFKWETVD--YNFRFLQKVWN-IYRFAERHIKDFDYEKYKDIELEPLDRWILSRLHRII 628

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++++ +     D Y +  K + L   + +          E++ 
Sbjct: 629 KFATEELERYRFNLITRELMTFIWHEVADDYIEMVK-YRLYGDDEESKLKAKVALYELLY 687

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +I+  +F
Sbjct: 688 NVMLLLAPFVPHITEEIYHAMF 709



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 13/169 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  ENKPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +     TK            +  Q     R     +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGITKDQPEEFLKKCVEWTWQAIEAMRKQFIRIGYSADWDLEYHTMDDWYKAAVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +   KG IY+  +  ++  +        EV    +  Y      P+
Sbjct: 151 SLLEFYKKGLIYREEHPVYWCPKCRTSLAKAEVGYVEEEGYLYYIKLPL 199


>gi|253991460|ref|YP_003042816.1| valyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782910|emb|CAQ86075.1| valyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 965

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 137/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGDIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDAEGNVYVGRNEEEVRRENNLSANIILNQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 506 QTEALKTFH-PTDVLVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDE 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGIALEDLLEKRTGNMMQPQLAEKIRKRTEKQFPTGIEAHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLQG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 682 MMLSLADRWILAEFNQTVKAYREALDTYRFDMAANILYEFTWNQFCDWYLELSKP-AINK 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  +EV+  L  L    +P +   I+  + V
Sbjct: 741 GSEAEVRGARHTLIEVLEGLLCLAHPIIPFITETIWQRVKV 781



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             RE   I           H+GHA++  I D + R+ R+ G + L+ +GTD  G      
Sbjct: 44  TSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQSGTDHAGIATQMV 103

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           F+D+  +             R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITNQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEAFVRLYQENLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 218


>gi|317011349|gb|ADU85096.1| valyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 872

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 139/382 (36%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + +F +    Q+ +    +   +F  P  
Sbjct: 330 KENALLEKIEEHAHQVGHCYRCHNVVEPYVSKQWFVKPEIAQNSIEKIQQGLAQFYPPNW 389

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 390 INN--YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFASLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+EVIE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEVIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N VS  + +  + +          T       S  +  
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAVSY-LKLKQESFKDKERLNEYQTPLGRYAKSRLNLA 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 IKEVRSALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+L R+ R+DG   L+  G D  G    
Sbjct: 35  IQEKGKRFCLMMPPPNVTGVLHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  ---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEQGLIVQDHYMVNWCTKDG 186


>gi|254172256|ref|ZP_04878932.1| valyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214034152|gb|EEB74978.1| valyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 888

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 16/262 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  + + D               +P  L   G DI+R  A Y  +  +
Sbjct: 451 VLDCWVDSSITPLIISRWHDAIKGNEEAKRWFEHNFPTALRPQGTDIIRTWAFYTIFRTY 510

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    + +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 511 MLTGQKPWRDVLINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALA-PPGED 569

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     L D+D     P      D  ILS   R++
Sbjct: 570 HPFKWETVD--YNYRFLQKVWN-IYRFAERHLADFDPAK-APEELEPLDRWILSRLHRLI 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E M+    +    ++I+ V     D Y +  K + L   + +          E++ 
Sbjct: 626 KFATEEMERYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKTALYELLY 684

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            L +L+  FVP +  +++  LF
Sbjct: 685 NLMLLMAPFVPHITEELYQNLF 706



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  EKRPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMTGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNA-----------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +                   +  Q     R+    +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGISKDQPEKFLQKCVEWTWQAIEAMRNQFIRIGYSADWDLEYHTMDDWYKAAVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +   KG +Y+  +  ++  R        EV  
Sbjct: 151 SLIEFYKKGLLYQAEHPVYWCPRCRTSLAKAEVGY 185


>gi|160901434|ref|YP_001567016.1| leucyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687210|sp|A9C1G8|SYL_DELAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160367018|gb|ABX38631.1| leucyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 911

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     A
Sbjct: 30  QAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  ALKNKVPPAQWTYDNIAYMKKQMQAMGLAIDWSREIATCDPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E  GY+ +++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRTGAPVEKREIPGYYLKITDYAQELLDH 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   +         +V    ++ +   S  R  F   I+
Sbjct: 206 VQVGGDKATLTGWPEKVRLMQENWIGKSSGVRFAFTHDIR 245



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N IDP E+IE+ G D  R + +          ++   ++          + N  
Sbjct: 660 MSKSKNNGIDPQELIEKYGADTARLYTMFTAPPELTLEWNDAAVEGSYR--FLRRVYNFG 717

Query: 363 SRSVSMILKDYDGMIPTPGAFTESD-----ESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           ++   M +      +    +  + +     +S+      VL+++  + Q    +  ++  
Sbjct: 718 AKLSQMDMAGAVQSVAGAKSLDDVEFGKAAKSLRLEIHTVLKQVEYDYQRMQYNTVVSGA 777

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +++ +          E  K+  D  + V    +E    L  +L    P LA+ ++  L
Sbjct: 778 MKMINAL----------EDFKSFDDAGAQV--ALIEGFGILLRVLYPATPHLAHALWSEL 825

Query: 478 FVA 480
             A
Sbjct: 826 GYA 828


>gi|13471197|ref|NP_102766.1| valyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|75543677|sp|Q98LB1|SYV_RHILO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14021941|dbj|BAB48552.1| valyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 927

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 130/359 (36%), Gaps = 22/359 (6%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEG-YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           V K  +  Y++   N   W      ++                       +    E    
Sbjct: 408 VPKNWEKTYFDWMENIQPWCISRQLWWGHQIPAWYGPDGRVFVEKTEEEALSAAIEYYLA 467

Query: 200 VKSGLKDLSLSR-KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           ++   K     R + F  G  +  D   ++  W  +     +T G+ D     K  ++  
Sbjct: 468 LEGPWKAWVEDRLENFQPGEILTRDED-VLDTWFSSALWPFSTLGWPDQTPELKT-YYQT 525

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVID 312
           D+ V G DI+ F    W A ++   L    +   H   +H       G K+SKS GNVID
Sbjct: 526 DVLVTGFDIIFF----WVARMMMMGLHFMDEEPFHTVYVHALVRDKNGAKMSKSKGNVID 581

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+++I+E G DALR+ L    A G+D   D   +      +    + N  +R   M    
Sbjct: 582 PLDLIDEYGADALRFTLTVMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNEVA 638

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDA 430
            +       A    +  IL+  +R  ++I + + +   + A       V     D Y + 
Sbjct: 639 RNDDFWLNDAKLAVNRWILTELTRAARQITDGITSYRFNEAAGAAYRFVWNLFCDWYLEL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            KP     T+    +        V+ ++  LL   +P +  +++     A E +  +SL
Sbjct: 699 LKP-VFMGTDEAAKAESRACVAFVLDEIYKLLHPMMPFMTEELWAQ--TAGEGKERESL 754



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 22/172 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-------- 58
             I           H+GHA    + D+L RF R+ G +VL+  G D  G           
Sbjct: 38  FTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKNVLWQPGMDHAGIATQMVVERQL 97

Query: 59  -AKAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             K      +T + F+++                + +    D S + F  T ++      
Sbjct: 98  MEKQIHRRDLTREQFIEKVWEWKAESGGTIFNQLKRLGASADWSRERF--TMDEGLSKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             ++  +  +G IYK      +  R     +D EV +            P++
Sbjct: 156 LEVFVTLYKEGLIYKDKRLVNWDPRLLTAISDLEVEQHEVNGNLWHFRYPLE 207


>gi|21674370|ref|NP_662435.1| valyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81790947|sp|Q8KC74|SYV_CHLTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21647549|gb|AAM72777.1| valyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 901

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 132/365 (36%), Gaps = 49/365 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F ++    +  L           P    N         ++D  +SR+   W
Sbjct: 362 VEPYLSEQWFVKMQPLAEPALKVVNDGEIRFHPEHWINT-YRHWMENIQDWCISRQ-LWW 419

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D +                          ++  W  +    LTT G+     
Sbjct: 420 GHRIPAWYDDKGNVWVASSYEEACHLAGTDKLSQDEDVLDTWFSSWLWPLTTLGWTGPHS 479

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P D  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 480 DNDDLRAFYPTDTLVTGPDIIFFWVARMIMAGLHFKGDVPFRDVYFTSIIRDMKGRKLSK 539

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ +V     G+D  + ++  +  +  + A  I N  SR 
Sbjct: 540 SLGNSPDPLKVIDTYGTDALRFTIVYIAPLGQDVLFGEEKCE--LGRNFATKIWN-ASRF 596

Query: 366 VSM-----------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           V M            ++ +    P     + +   ++S  + +L+   + M N  ++  +
Sbjct: 597 VFMQREKLFATREEFVEAFANFTPQRELMSSAGRWLMSRYNAMLERYHQAMANFKVNDMV 656

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y +A K         +R    + + V V+  +   L   +P + ++
Sbjct: 657 KIVHEFFWGDYCDWYVEALKSELTGDITEERGRHAVCLAVSVLEGVLKALHPVMPFITDE 716

Query: 473 IFDIL 477
           I+  +
Sbjct: 717 IWHAI 721



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              +            +GH     + D+  R+ R+ G + L+  GTD  G       +  
Sbjct: 47  PYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYARMMGKEALWLPGTDHAGIATQTVVEKK 106

Query: 66  GVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++           L IS D    + T ++R  +   
Sbjct: 107 LRKEGVTRHDLGRRDFLDKVWEWREEYGGLILRQLRKLGISCDWRRNLFTMDERASEAVI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +  +G IY+G     +    +   +D+EV  
Sbjct: 167 NTFVALYREGLIYRGRRIINWCPVSQTALSDEEVIM 202


>gi|125973752|ref|YP_001037662.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004483|ref|ZP_05429462.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417908|ref|ZP_06248928.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231601|sp|A3DEU0|SYL_CLOTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|125713977|gb|ABN52469.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991488|gb|EEU01591.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409310|gb|EFB39568.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940054|gb|ADU74088.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 825

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++K Y+     YP+   H+GH     I DV+ARF R++G +VL   G D  G     A
Sbjct: 28  ESKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKRMNGFNVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  N R     L ISY  D  + T    ++   + ++ ++   G  
Sbjct: 88  AIKRGVHPNDWTWSNIDNMRRQLKQLGISYDWDREVATCHPDYYKWTQWMFLQLYKNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G          + V   + E +FF+++ Y  +LL  
Sbjct: 148 YKKKAYVNWCPSCATVLANEQVVNG----VCERCKSVVGKKDLEQWFFKITDYAQRLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   +       G
Sbjct: 204 IEKLKGWPDKVKVMQQNWIGRSEG 227



 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 26/266 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y          D  + ++W P D ++ G +    H +Y    +  
Sbjct: 493 DTMDTFVCSSWYYLRYCDPCNDKAPFDKERIRYWLPVDQYIGGVEHAILHLLYSRFLMKV 552

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +  + P    + + G +L  G K+SKSLGNV+ P E+IE+ G D  R F++   
Sbjct: 553 LYDLGYVDYDEPFT-NLLTQGMVLKDGAKMSKSLGNVVSPEEIIEKYGADTARLFILFAS 611

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +   G++        N +  +V+     + +  +        FT++D+ +  +
Sbjct: 612 PPEKDLEWSDQGVEGCYR--FINRVWRIVNEFADAVKEGGNI---DTSTFTKADKELWYM 666

Query: 394 CSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            +  L+ + +++ Q    + A++ V+ LV+ +  Y D     ++   + ++A     +  
Sbjct: 667 LNNTLKRVTDDISQRFNFNTAISAVMELVNSLYYYKD-----KVADDSKNKA-----LVR 716

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           EVI +L I+L  F+P    +++  + 
Sbjct: 717 EVIEKLIIMLAPFIPHATEELWSAIG 742


>gi|294793765|ref|ZP_06758902.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455335|gb|EFG23707.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 822

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G          NPV+  +   +F R++ Y D+LL+ 
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDG----VCWRCDNPVEKKDLSQWFLRITEYADRLLTD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDHWPQRVKLMQKNWIGRSEG 229



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 117/343 (34%), Gaps = 44/343 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E+ G            L          +     +E            
Sbjct: 429 QRYWGVPIPVVYCEKCGEQLVPEEELPVRLPENVKFESGAVSPLATSESFLNTTCPKCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYADAKNDQAPFDKKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLGLIEANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++      +D  +   G++              + R   +I    +    
Sbjct: 599 TYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIIDAYNEEAKK 649

Query: 379 T-PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              G  T+ +  +     RV++++ E++  N   + A++ ++ LV+ +            
Sbjct: 650 NVTGELTKDEFGLRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMY----------- 698

Query: 437 KKTNPDRASTVLYVTVEVI-RQLAILLQAFVPKLANKIFDILF 478
              + D+A T+       + R L +LL  FVP +  +++  L 
Sbjct: 699 --AHKDKAETINSALANELTRSLLLLLAPFVPHITEELWHELG 739


>gi|227357026|ref|ZP_03841397.1| valyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227162829|gb|EEI47789.1| valyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 962

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 128/381 (33%), Gaps = 59/381 (15%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E  +F             +      +P    NE    V  G  +  + R+          
Sbjct: 421 ENMYFSWMNDIQDWCISRQLWWGHRIPAWYDNE--GHVYVGRDEEEVRRENNIAADVALR 478

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
             + ++  W  +     +T G+ +N +  K    P ++ V G DI+ F         +  
Sbjct: 479 QDEDVLDTWFSSALWTFSTLGWPENTEALKTFH-PTNVLVSGFDIIFFWIARMIMMTMHF 537

Query: 283 --------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P      +      +G+K+SKS GNV+DP+++I+ +              
Sbjct: 538 IKDDEGKPQVPFKTVYMTGLIRDEEGQKMSKSKGNVLDPLDMIDGITLDKLLEKRTGNMM 597

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L      +  N 
Sbjct: 598 QPQMAERIAKRTKKEFPEGIEAHGTDALRFTLAALASTGRDINWDMKRL--SGYRNFCNK 655

Query: 358 IGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +D D         F+ +D  IL+  +  ++  RE + N     A   
Sbjct: 656 LWN-ASRFVLMNTEDQDCGYQGGEMTFSLADRWILAEFNNTIKAYREALDNYRFDIAAGI 714

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D Y +  KP  + K N  +     +  +EV+  L  L    +P +   I+
Sbjct: 715 LYEFTWNQFCDWYLELSKP-AVHKGNDAQKRAARHTLIEVLEGLLRLAHPIIPFITETIW 773

Query: 475 DIL----FVADENRCFQSLDQ 491
             +     +  E    Q+  +
Sbjct: 774 QRVKEVKGIEGETIMLQAFPE 794



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 41  TSKESFCIVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 100

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++  N  +    L   + +D    T ++  
Sbjct: 101 VERKIAAEEGKNRHDYGRDAFIDKIWEWKAESGGNISNQMRRLGNSVDWDRERFTMDEGL 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 161 SKAVKEAFVRLHKEDLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 215


>gi|317494179|ref|ZP_07952595.1| valyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917952|gb|EFV39295.1| valyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 951

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAIEAVEQGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNEGNVFVGRDEDEVRRENNLSADVELKQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P ++   G DI+ F         +           +P      +      
Sbjct: 492 QTEALKTFH-PTNVLTSGFDIIFFWIARMIMLTMHFVKDENGKPQVPFKTVYVTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMIDGISLPELLEKRTGNMMQPQLAEKIAKRTEKQFPEGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D  +    
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGLNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  ILS  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWILSEFNQTVKAYREALDNYRFDLAANILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVTVLEALLRLAHPVIPYITETIWQR 764



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKEESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRETKGSMWHLRYPL 204


>gi|254460898|ref|ZP_05074314.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677487|gb|EDZ41974.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 1021

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 103/263 (39%), Gaps = 9/263 (3%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           + +  DP  ++  W  +    + T G+ +  D   +K++P    + G+DIL F    +  
Sbjct: 582 MPLWRDPD-VLDTWFSSGLWPIGTLGWPEQTD-ELSKYFPTSTLITGQDILFFWVARMMM 639

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   +P             KG+K+SKS GNV+DP+E+I+E G DALR+      + 
Sbjct: 640 MQLAVVDEVPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEFGADALRFTNASMASL 699

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G     D   ++     +    + N  +        +       P      ++ I    +
Sbjct: 700 GGVLKLDTKRIEG--YRNFVTKLWNAATYGDFKGTFNIAHFDAIPTTTLPLNKWIKGEIA 757

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +  + + + ++    + A   + +        +Y +  KP  L +   D A+        
Sbjct: 758 KTRETVDDALEAYRFNDAANALYAFTWNTFCSQYLEFTKP-VLDEGTADEAAETKATYAW 816

Query: 454 VIRQLAILLQAFVPKLANKIFDI 476
            + Q+ I+L   +P +  +I+  
Sbjct: 817 ALDQILIMLHPIMPFVTEEIWGQ 839



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 30/182 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           HIGHA+   + D++ R+ R+ G D L+  GTD  G       +  
Sbjct: 38  TFCIMIPPPNVTGVLHIGHAFNNTLQDIMIRWKRMQGFDTLWQPGTDHAGIATQMVVERK 97

Query: 66  GVTTK-----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTE------- 99
              T+                  +  ++     +    L  S  +D    T         
Sbjct: 98  LAETQQPTRVEMGRDAFLEKVWEWKGESGGTIINQLKRLGASCDWDREAFTMSGAPNAPA 157

Query: 100 ----KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++ ++ +KG IY+G     +    E   +D EV       +      
Sbjct: 158 DVAGGNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 217

Query: 156 PV 157
           P+
Sbjct: 218 PL 219


>gi|270265129|ref|ZP_06193392.1| valyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041063|gb|EFA14164.1| valyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 914

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 337 IEPMLTDQWYVRTAPLAKVAVEAVEQGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 394

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 395 GHRIPAWYDVNGKVYVGRSEEEVRSENNLGADVVLTQDEDVLDTWFSSGLWTFSTLGWPE 454

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 455 QTDALKTFH-PTSVMVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 513

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 514 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 573

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 574 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNAEGQDCGFNGGE 630

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE +       A   +         D Y +  KP     
Sbjct: 631 KVLSLADRWILAEFNRTVKAYREALDTYRFDLAANILYEFTWNQFCDWYLELTKPVVSNG 690

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  ++  T  +  + V+  L  L    +P +   I+  
Sbjct: 691 SEAEQRGT-RHTLITVLEALLRLAHPVIPFITETIWQR 727



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 25/169 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D + R+ R+ G + L+  GTD  G       +      
Sbjct: 1   MIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAE 60

Query: 70  KVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +                           +R  R + + +D   + F  T ++   +  R 
Sbjct: 61  ENKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDEGLSNAVRE 118

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 119 VFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 167


>gi|149924630|ref|ZP_01912984.1| Valyl-tRNA synthetase, class Ia [Plesiocystis pacifica SIR-1]
 gi|149814515|gb|EDM74102.1| Valyl-tRNA synthetase, class Ia [Plesiocystis pacifica SIR-1]
          Length = 922

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 128/363 (35%), Gaps = 48/363 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +    +F ++    +K L+  E     I P  R  +   +++  ++D  +SR+   W
Sbjct: 358 VEPLPSTQWFVKVGPLAEKALAAVEQGDTVIYPQHRTADYYRWME-NIRDWCISRQ-LWW 415

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                               + ++  W  +    LTT G+    
Sbjct: 416 GHRIPAWHCESCGAITVAREDPSACSECGGADIHQDEDVLDTWFSSGLWPLTTLGWPAED 475

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFIL-HKGEKISKS 306
           +    +F+   L   G DIL F       F L     +P K +F H  +L     K+SK+
Sbjct: 476 N-ELPRFYSTSLMETGWDILFFWVARMMMFGLHFTGEVPFKTIFLHSMVLGEDKRKMSKT 534

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I+  G DALR++L           + K  ++     +  N + N  +R  
Sbjct: 535 KGNVVDPVSLIDTYGTDALRFYLCTMAGQDAGIVFSKARVEG--YRNFCNKLWN-AARFA 591

Query: 367 SMILKDYDGMIPTPGAFTE----------SDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           SM L   +          +          +D  IL     + ++  + + +  +  A   
Sbjct: 592 SMKLDGLELERWRAEILDDPATGLERLSTADRWILGRALALAEDFAQKLGDWRLDLAAHA 651

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               V     D Y +  K       +P            V   +  +L   +P +   I+
Sbjct: 652 AYQFVWHELCDWYLELSKRRLSADADPAERHATQGTLATVFDLVLRVLHPMIPFITETIW 711

Query: 475 DIL 477
             L
Sbjct: 712 QRL 714



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +     +         + H+GHA    I D L R+HR+ G   L+  GTD  G       
Sbjct: 36  DAPHFTVVLPPPNVTGRLHMGHALTATIEDTLVRWHRMRGHRALWLPGTDHAGIATQVMV 95

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + +++     +  + L  S D   +  T ++    
Sbjct: 96  ERQLAKEGKTRQGVGREAFLDKVWEWKEEHGGIIDEQHERLGASLDWSRYRFTMDEVSSR 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             R  + ++ ++G IY+      +    +   +D EV              PV   E 
Sbjct: 156 AVREAFVRLHEQGLIYRDYRLINWDHGSQTALSDLEVEHTETDGKLWHIAYPVADSET 213


>gi|304321152|ref|YP_003854795.1| valyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300054|gb|ADM09653.1| valyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 891

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 122/366 (33%), Gaps = 46/366 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++          L   +S+    +P         +++  ++   +SR+   W
Sbjct: 364 IEPMLTDQWWVDAETLAGPALEAVKSNRTSFVPDNWSKTYYQWLE-NIQPWCISRQ-LWW 421

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I +   P                                ++  W  +     +T G+
Sbjct: 422 GHQIPVWYGPDGTPFCALTEEEARAAAADHYGQDTALVQDEDVLDTWFSSALWPFSTLGW 481

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
             +    K  F+P  +     DI+ F    +      L  ++P  +          +G+K
Sbjct: 482 PQDETEVKT-FYPTAVLSTAFDIIFFWVARMMMMGLHLQGDVPFRQVYIHALVRDAQGQK 540

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+ GNVIDP+E ++  G D+LR+ L      G+D       ++     +    + N  
Sbjct: 541 MSKTKGNVIDPLEKMDAYGTDSLRFTLAAMATPGRDVKLADSRIEG--YRNFRTKLWN-A 597

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M               T   + IL   S   + I   + +     A   +     
Sbjct: 598 ARFALMNEASLTPDYDPAEVKTPLCQWILHEVSATERRIDTALADYRFDDAAQAIYGFTW 657

Query: 423 E--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D + +  KP      +    +        V+ ++ +LL  F+P +  +++    + 
Sbjct: 658 NIYCDWFLEFAKP-VFAGDDQAAVTETRATAAFVLDRILVLLHPFMPYVTEELW---GLT 713

Query: 481 DENRCF 486
            E + F
Sbjct: 714 AERQDF 719



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 60/186 (32%), Gaps = 28/186 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I         + H+GHA    + D+L R++R+ G +VL+  GTD  G       
Sbjct: 38  EGEPYAIVFPPPNVTGRLHMGHALNATLQDILIRYNRMRGKNVLWQVGTDHAGIATQMMV 97

Query: 63  QNAGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
           +                       +  +           R +    D + + F  T ++ 
Sbjct: 98  ERQLAAENQPDRHTLGRAAFLERVWAWKEESGGAIQDQMRRLGASCDWTRERF--TMDEG 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR-----DEAYYNDDEVYKGADGQYYNAQHNP 156
                R  + ++  +G IY+      +  +      +    + EV        Y     P
Sbjct: 156 LSLAVRETFVRLYKEGLIYRDKRLVNWDPKLLTAISDLEVENREVAGHMWHVAYPLADGP 215

Query: 157 VQWMEE 162
           V  +EE
Sbjct: 216 VDGVEE 221


>gi|150390863|ref|YP_001320912.1| isoleucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950725|gb|ABR49253.1| isoleucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 1033

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 77/462 (16%), Positives = 158/462 (34%), Gaps = 33/462 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV--FVDQNSRNFRDMADVLDISYDDF 94
           +      D+      DE G+ I         T     FV +   +        +  +   
Sbjct: 327 YQVGRKYDLPVLQPVDEAGKYI--------GTPWEGRFVMECDVDIIKWLHGEEKLFSKE 378

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             T    ++  C     ++   G      Y     L+DE   N++ V    D        
Sbjct: 379 KITH---NYPHCWRCSTELLYYGKPS--WYIEMTKLKDELIANNNSVNWYPDYVGEKRFG 433

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           N +       +    + Y    L+ +    E    I  R E++      + +     +  
Sbjct: 434 NWLD--NLNDWAISRNRYWGTPLNIWRCDCEHTTSIGSRKELVERAIEDIDESVELHRPH 491

Query: 215 DWGIKIPDDPQY--------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
              I +  D           ++  W D+         Y      +  + +PAD    G D
Sbjct: 492 VDDIHLKCDKCGGTMTRVPEVIDCWFDSGAMPFAQHHYPFENKENFDELFPADFICEGID 551

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+++   +  +    P    + +   +  +G K+SKS GN +DP ++ ++ G DA
Sbjct: 552 QTRGWFYSLLAISTFVMGKSPYKNVLVNDLILDKEGSKMSKSKGNTVDPFQLFDQYGADA 611

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPG 381
           LR++L+          +D DGLK+   +     + N+ +        D    +       
Sbjct: 612 LRWYLLHVSPAWTPTRFDVDGLKEIQ-SKFFTTLENVYTFFTLYANNDGIDPNDFFIEYD 670

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
              E D+ +LS  + V+ ++ +N+    + +A+ ++   V+E   + Y    +       
Sbjct: 671 QRPELDQWVLSKYNSVISDVEQNLAVYDLTKAVRKIQEFVNEDLSNWYIRRARRRFWASE 730

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  V   T E++  +  L+  F P +A+++   L   +
Sbjct: 731 LDQDKKAVYNTTYEILVGVCKLVAPFAPFIADELHQKLTGEE 772



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 61/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E           N +P I H     + D + R+H + G  V    G D HG  +   
Sbjct: 37  QGKESFVFYEGPPTANGKPGIHHVIARTLKDSVCRYHAMKGYQVKRKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V    + +RDM + +   I  D+   T E  +
Sbjct: 97  VEKQLKLSSKADIEGYGIAEFNDRCRESVFTYEKQWRDMTERMGYTIDLDNPYITLENNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   +  K   +  IY+G     Y  R        EV +G      N    P++    
Sbjct: 157 IESVWWILDKFFKEDMIYEGHKILPYCPRCGTGLASHEVSQGYKEIKSNTVVVPMKRKGA 216

Query: 163 EGYFFRLS 170
           + YF   +
Sbjct: 217 DEYFLAWT 224


>gi|315125730|ref|YP_004067733.1| valine tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014244|gb|ADT67582.1| valine tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 950

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 140/398 (35%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R++   +      ++     +P +  N   S++   ++D  +SR+   W
Sbjct: 371 IEPLLTDQWYVRVAPLAEPAKEAVKNGDIQFVPKQYENMYFSWMND-VQDWCISRQ-LWW 428

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDSEGNVYVGRDEAEVRRDNNIADSVALSQDEDVLDTWFSSALWTFSTQGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P+D+ V G DI+ F         L           +P      +      
Sbjct: 489 NTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTLHFIKDENGKSQVPFKTVYVTGLIRDD 547

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G+K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 548 NGDKMSKSKGNVLDPLDMIDGIGLEDLVQKRTGNMMQPKLAAKIEKDTRKVFANGIEAHG 607

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D + L+     +  N + N  SR V M  ++ D     + 
Sbjct: 608 TDALRFTLAAMASTGRDINWDMNRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFNDSE 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  IL      ++   E++ N     A   +         D Y +  KP  L K
Sbjct: 665 KQYSLADRWILGQYEATVKTYTEHLDNYRFDLAANTLYEFTWNQFCDWYLELTKP-VLFK 723

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            N  +     +  + V+  L  L+   +P +   I+  
Sbjct: 724 GNEAQQRGTRHTLITVLESLLRLMHPMMPYITETIWQR 761



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 21/167 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L RF R+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTDHAGIATQMLVERKLAAE 95

Query: 70  -----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILW 110
                              + +++          L   + +D    T +    +  + ++
Sbjct: 96  EGKTRHDLGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGLSEAVKEVF 155

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  +  IY+G     +  +     +D EV       +      P+
Sbjct: 156 VRLHKENLIYRGKRLVNWDPKLHTAISDLEVENKDKQGHMWNLRYPL 202


>gi|267992383|gb|ACY87268.1| hypothetical protein STM14_0756 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|323128965|gb|ADX16395.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 941

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 111 ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 170

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 171 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 230

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 231 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 286

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 287 LDKLDHWPDTVKTMQRNWIGRSEG 310



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 571 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 630

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 631 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 690

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 691 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 746

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 747 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 804

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 805 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 851

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 852 TLWQELGGEGDIDNAPWPVADEQ 874


>gi|313672434|ref|YP_004050545.1| leucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939190|gb|ADR18382.1| leucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 852

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y      YP+ + H+GH     I DV++R+  + G +V+   G D  G     AA
Sbjct: 29  NKPKYYCLEMFPYPSGKIHMGHVRNYAIGDVISRYKFMKGFNVIHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  N +     + +SY  D  + T +  ++   ++++ ++ +KG +Y
Sbjct: 89  IKNKIHPAKWTYSNIENMKMQLKKMGLSYDWDREVATCDPEYYKWEQMIFLQMYEKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G          + V+  E   ++F+++ Y ++LL + 
Sbjct: 149 RKKSLQNWCNDCHTVLANEQVEDG----RCWRCGDIVEKKEINSWYFKITDYAEELLDWT 204

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
              P +   +            G
Sbjct: 205 YKLPGWPEKVLVMQRNWIGKSYG 227



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 104/285 (36%), Gaps = 62/285 (21%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------------- 278
                Y +        D  + K+W P D ++ G +    H +Y   +             
Sbjct: 502 WYFLRYCSPKNDKAPFDKDEVKYWMPVDQYIGGVEHAILHLLYSRFYTKVLRDLGYVDFD 561

Query: 279 ------------------LLSANLPLPKKVFSHGFI-------LHKGEKISKSLGNVIDP 313
                                 +   P++V             + + EK+SKS  NV+DP
Sbjct: 562 EPFERLLTQGMVCKETYRCGEHDWLFPEEVVDGKCKHCGKAVEIGRVEKMSKSKKNVVDP 621

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD- 372
             +I E G D  R F +      KD  +++ G++              + R   +I K+ 
Sbjct: 622 DNLINEYGADTARLFSLFASPPEKDLEWNEQGVEGSF---------RFLGRVWRLIHKNI 672

Query: 373 --YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
             +   +   G  ++  + IL      ++++  +++   ++ A+A ++   +        
Sbjct: 673 ALFSEELSDNGEESKVSKDILYYMHSAIKKVTLDIEKYQLNTAVAAIMEYSNN----LSD 728

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +P    KT+ +R     Y+  E +R L ILL  F P ++ ++++
Sbjct: 729 IEP--QIKTDKER-----YLFREALRSLIILLAPFTPHISEELWN 766


>gi|251772855|gb|EES53414.1| Leucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 837

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y      YP+ + H+GH     I D +AR+ R+ G +VL   G D  G     A
Sbjct: 31  RTKPKYYCLEMFPYPSGRIHMGHVRNYSIGDAIARYKRMRGYNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    + + N  + ++    L +SY  D  + T    ++   +  + K+ +KG  
Sbjct: 91  AILRGIHPAEWTESNIAHMKEQLQRLGLSYDWDREVATCSPSYYRWNQWFFLKLLEKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G          + V       +F R++ Y   L++ 
Sbjct: 151 YRKEALLNWCDSCATVLANEQVEDG----RCWRCGSQVILRTMNQWFLRITDYARDLMAG 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
             S   +   +           +G
Sbjct: 207 LSSLEGWPERVRTMQANWISPSTG 230



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 23/239 (9%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFSH----GFILHKGEKI 303
             + + P D ++ G +    H +Y   +   L    L   ++ FS     G +L  G K+
Sbjct: 530 DLSYWLPVDQYIGGVEHAILHLLYSRFFTRVLYDLGLSPVQEPFSTLLTQGMVLKDGAKM 589

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP  +I + G D +R F +      KD  +D   ++          +G L  
Sbjct: 590 SKSKGNVVDPDHLIAQYGADTVRLFTLFSAPPDKDLSWDDKAVEGA-----YRFLGRLYG 644

Query: 364 RSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLV 421
           R  +++ +       +PG   T    ++ S     +  +  ++ +   ++ A+A ++ L+
Sbjct: 645 RVNALLEEFPQANNDSPGKELTSEATALRSKIHETIVRVTTDLDSHAQLNTAIAALMELL 704

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + +  Y       +     PD       +  E    L  LL  F P +A+ + + L + 
Sbjct: 705 NALGSY-------QALSGEPDAVR--GPLLREGYLTLLTLLSPFAPHIAHHLGERLGID 754


>gi|146296824|ref|YP_001180595.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166230621|sp|A4XKG9|SYL_CALS8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145410400|gb|ABP67404.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 817

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y+
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLKELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    E    +++V  G          + V   + E +FFR++ Y ++LL   +
Sbjct: 150 KRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITKYAERLLRDID 205

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 206 KLDGWPEKVKIMQKNWIGRSEG 227



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 65/452 (14%), Positives = 149/452 (32%), Gaps = 45/452 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + +   + +     +   +     E          +  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLPIKVVIKGDGVDIQNLQSAYEGEGVLINSGEFNG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +   + K       +   +A             Q Y     P+ + ++ G        
Sbjct: 390 LKNTEAMKKITEYLEKNGYGKACVTYKLRDWLISRQRYWGAPIPIVYCDDCGIVPVPEEE 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y               E               R+T         D         
Sbjct: 450 LPVLLPYNVEFKPTGQSPLAYCEEFVNTTCPKCGKPARRET---------DTMDTFICSS 500

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y          + S   +W P D ++ G +    H +Y   F         +S  
Sbjct: 501 WYYFRYTDPKNSEKPFEKSLVDYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYISFE 560

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K + + G +L  G K+SKSLGN++ P E++E+ G D  R F++      +D  +  
Sbjct: 561 EPF-KNLLTQGMVLKDGAKMSKSLGNIVSPEEIVEKYGADTARLFILFAAPPERDLEWSD 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIR 402
            G++         G    ++R   + ++  D +  +     +E D+ +    +  ++++ 
Sbjct: 620 QGVE---------GCFRFLNRLWRLYIELKDKLSDSSLPGQSELDDELNYRLNYTIKKVT 670

Query: 403 ENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E++ +    + A++ ++ L++ +  Y              ++ S    + ++ ++   IL
Sbjct: 671 EDIGERFNFNTAISSIMELLNFLYDY-------------KEKGSLNRELILKTLKNFLIL 717

Query: 462 LQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
           +  F P +A ++++I+      E+  +   D+
Sbjct: 718 IYPFTPHIACELWEIMGFEGDIEDVSWPEYDE 749


>gi|304395664|ref|ZP_07377547.1| leucyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356958|gb|EFM21322.1| leucyl-tRNA synthetase [Pantoea sp. aB]
          Length = 860

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   ++           G
Sbjct: 206 LDTLEEWPEQVKTMQRNWIGRSEG 229



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 78/195 (40%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V + V         +     +  +  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWKLVYEHTSQGATVALDVDSLNDEQKSLRRDLHKTIAKVADDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   +++  DRA     +  E +  +  LL  F P     ++  L  
Sbjct: 732 LMNKL-----ARAP---QESEQDRA-----LMQEALLAIVRLLYPFTPHACYVLWQTLGG 778

Query: 480 AD--ENRCFQSLDQR 492
               +   +   D+ 
Sbjct: 779 EGTIDEASWPVADEA 793


>gi|197287274|ref|YP_002153146.1| valyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|194684761|emb|CAR46786.1| valyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 962

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 143/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R +      +   ++     +P +  N   S++   ++D  +SR+   W
Sbjct: 385 IEPLLTDQWYVRAAPLAKPAVEAVKNGDIQFVPKQYENMYFSWMND-IQDWCISRQ-LWW 442

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 443 GHRIPAWYDNEGNVYVGRDEEEVRRENNIAADVALRQDEDVLDTWFSSALWTFSTLGWPE 502

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P ++ V G DI+ F         +           +P      +      
Sbjct: 503 NTEALKTFH-PTNVLVSGFDIIFFWIARMIMMTMHFIKDDEGKPQVPFKTVYMTGLIRDE 561

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 562 EGQKMSKSKGNVLDPLDMIDGITLDKLLEKRTGNMMQPQMAERIAKRTKKEFPEGIEAHG 621

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  +D D       
Sbjct: 622 TDALRFTLAALASTGRDINWDMKRL--SGYRNFCNKLWN-ASRFVLMNTEDQDCGYQGGE 678

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  IL+  +  ++  RE + N     A   +         D Y +  KP  + K
Sbjct: 679 MTFSLADRWILAEFNNTIKAYREALDNYRFDIAAGILYEFTWNQFCDWYLELSKP-AVHK 737

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +     +  +EV+  L  L    +P +   I+  +     +  E    Q+  +
Sbjct: 738 GNDAQKRAARHTLIEVLEGLLRLAHPIIPFITETIWQRVKEVKGIEGETIMLQAFPE 794



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 41  TSKESFCIVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 100

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++  N  +    L   + +D    T ++  
Sbjct: 101 VERKIAAEEGKNRHDYGRDAFIDKIWEWKAESGGNISNQMRRLGNSVDWDRERFTMDEGL 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 161 SKAVKEAFVRLHKEDLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 215


>gi|294012492|ref|YP_003545952.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292675822|dbj|BAI97340.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 936

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 17/278 (6%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +  DP  ++  W  +      T G+ D  +  K + +P DL + G DIL F    +    
Sbjct: 511 LYRDPD-VLDTWFSSALWPFGTLGWPDETETLK-RHYPNDLLISGFDILFFWDARMAMQG 568

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                ++P  K           G+K+SKS GNV+DP+ +I+  G DALR+F+    + G+
Sbjct: 569 MEFMGDVPWRKLYLHGLVRAADGQKMSKSKGNVVDPLGLIDRFGADALRFFMAAMESQGR 628

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D   D+  ++     + A  + N  +R +             P A    +  I++     
Sbjct: 629 DVKMDEKRVEG--YRNFATKLWN-AARFLQSNGVAASTSHEAPHAEAPVNRWIVAETVAT 685

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +Q I   M       A   +   V +   D Y +      L K + D       V     
Sbjct: 686 VQAIDIAMAELRFDAAANAIYHFVWDQFCDWYIE------LTKGSMDE--ETRAVAGWAF 737

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            Q+ ++L  F+P +  +++++    +         Q L
Sbjct: 738 DQILVMLHPFMPFITEELWNLTGTRESELIVARWPQAL 775



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E   I           HIGHA +  + D++ R+ RL G D L+  GTD  G         
Sbjct: 35  EPFTIVNPPPNVTGSLHIGHALDNTLQDIVIRYERLRGKDALWVVGTDHAGIATQMVVER 94

Query: 60  ----KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
               +  +    T + FV++                R +   +D + + F  T ++    
Sbjct: 95  QMEARQDKRTNYTREQFVEKVWEWKAESGGAITRQLRRLGCSMDWANERF--TMDEGFSK 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ ++  +G +Y+      +  R  +  +D EV        +     P+
Sbjct: 153 AVIKVFVELHRRGLLYRDKRLVNWDPRFRSAISDLEVETQEVKGGFWHFRYPL 205


>gi|262402700|ref|ZP_06079261.1| leucyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351482|gb|EEZ00615.1| leucyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 858

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 75/303 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDADY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDTTGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALEASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 773

Query: 476 ILF 478
            L 
Sbjct: 774 ALG 776


>gi|302880066|ref|YP_003848630.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582855|gb|ADL56866.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 893

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+ + H+GH     I DVL+R+HR+ G +V+   G D  G     A
Sbjct: 30  SDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMKGFNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AQ   V    +   N    R       L I +   + T    ++   + L+ ++ +KG I
Sbjct: 90  AQAHNVPPAAWTYDNINYMRRQLQSLGLGIDWSREVTTCTPEYYRWEQWLFTRLFEKGII 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +   D     +++V  G            V+  E   YFFR++ Y D+LL+ 
Sbjct: 150 YKKTSSVNWDPVDHTVLANEQVIDG----RGWRSGALVEKREIPMYFFRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDTLSGWPEQVKTMQANWIGKSFG 229



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 77/186 (41%), Gaps = 26/186 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+E G D  R F++      +   +   G++             
Sbjct: 652 EKMSKSKNNGVDPQAIIDEYGADTARLFMMFAAPPEQSLEWSDAGVEGS---------FR 702

Query: 361 LVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R         +  + T    G  T + +++     + +Q++ +++  +   + A+A 
Sbjct: 703 FLKRVWKATHDHVEQGVVTAFSSGELTAAAKTLRRQLHQTIQKVDDDIGRRKTFNTAIAA 762

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + L++ + ++ D        K++  RA     V  E++  +A++L   VP     ++  
Sbjct: 763 NMELLNALVKFDD--------KSDNGRA-----VAQEILEAIALMLNPIVPHTCQALWAG 809

Query: 477 LFVADE 482
           L    +
Sbjct: 810 LRPGSD 815


>gi|145219257|ref|YP_001129966.1| valyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205421|gb|ABP36464.1| valyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 902

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 135/383 (35%), Gaps = 49/383 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F  +    +K L    +      P    N        G++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVSMKPLAEKALDVVNNGEIRFHPPHWINT-YRHWMGGIRDWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    DP+                          ++  W  +    LTT G+     
Sbjct: 421 GHRIPAWYDPEGQVWVAASYEEACHLAGTDKLVQDEDVLDTWFSSWLWPLTTLGWTGPGS 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P +  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 481 DNDDLRAFYPTNTLVTGPDIIFFWVARMIMAGLYFKGDVPFRDVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ ++     G+D  + ++  +  +  + A  I N  SR 
Sbjct: 541 SLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEEKCE--LGRNFATKIWN-ASRL 597

Query: 366 VSM-----------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           V M               Y+   P   +F  +   I S  + +L+          ++  +
Sbjct: 598 VFMQREKYFEGPEDFAAYYEEFNPAAESFDLAGGWIWSAYNGMLEHYHAAFGQFRMNDIV 657

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y ++ K    +  +   A   + + V V+      L   +P + ++
Sbjct: 658 KTVYDFFWGDYCDWYLESLKVSLAEGRSEADARKAVALAVSVLEGTLKALHPVMPFITDE 717

Query: 473 IFDILFVADENRCFQSLDQRLKP 495
           I+  +     +    S D  +  
Sbjct: 718 IWHFVLPHSSHESIASSDMPVAA 740



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +            +GH     + D+  R+ R+ G + L+  GTD  G      
Sbjct: 44  EGRAPYSVLMPPPNVTGSLTLGHVLNHTLQDIFIRYARMTGKEALWLPGTDHAGIATQTV 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + D+           L IS D    + T ++R  
Sbjct: 104 VERKLRKEGVSRHDLGRKDFLGHVWQWRDEYGGLIVRQLKRLGISCDWRRNLFTMDERAS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     +  +   G IY+G     +    +   +D+EV  
Sbjct: 164 EAVINSFVALYRDGLIYRGKRIINWCPVSQTALSDEEVIM 203


>gi|261211999|ref|ZP_05926285.1| leucyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838607|gb|EEX65258.1| leucyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 858

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNEKGGKEWVAPTEVKVERDGKGRIVSAVDTTGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALEASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTETQDRA-----ILDEALKAITLMLYPITPHICFEMWV 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 774 ALGESNIDTANWPTYDEA 791


>gi|119477447|ref|ZP_01617638.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449373|gb|EAW30612.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 825

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E++K Y  T   YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TEKDKYYCLTMFPYPSGNLHMGHVRNYSIGDVISRYQRMLGKNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         + D N    R+    L  +YD    + T +  ++   +  + ++ +KG +
Sbjct: 90  AVKHNTAPGKWTDSNIAYMRNQLKQLGFAYDWSKELATCKPDYYRWEQWFFTRLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   DE    +++V  G           PV+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPEDETVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDQLDGWPEQVKTMQRNWIGRSEG 229



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 103/285 (36%), Gaps = 40/285 (14%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGK 265
            RK    GI +  +       ++++   Y   T          A     + P D ++ G 
Sbjct: 482 WRKDQLDGIPVERETD-TFDTFMESSWYYARFTCPDYEDGMLDADAANYWLPVDQYIGGI 540

Query: 266 DILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y   F         ++ + P   ++   G +L  G K+SKS GN +DP E+I
Sbjct: 541 EHAILHLLYARFFHKLMRDEGLINCDEPF-DRLLCQGMVLKDGTKMSKSKGNTVDPQEMI 599

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E+ G D++R  ++      +   +    L          G    + R    +        
Sbjct: 600 EQYGADSVRLSIMFAAPPEQSLEWSDSAL---------GGAHKFLHRLWGRVYNHLQNAK 650

Query: 378 PTPGAFTESDE---SILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKP 433
                    D+   ++       + ++ ++   +L  + A+A ++ L +++ +       
Sbjct: 651 APVLNTDSLDKGQQTLRRKLHETIAKVGDDFGRRLTFNTAIAAIMELTNDLSK------- 703

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             L   N    +    V  E ++ + ++L    P   +++++ + 
Sbjct: 704 --LPTDNEQGLA----VEHEALQAIIVMLSPIAPHFCHELWNAMG 742


>gi|326796280|ref|YP_004314100.1| leucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547044|gb|ADZ92264.1| leucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 815

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 9/234 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TTKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +     L   Y  D  I T    ++   +  + ++ +KG  
Sbjct: 90  AIKNKTAPAKWTTENIAYMKGQLKQLGFGYDWDREIATCTPEYYKWEQWFFTQLVEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G           PV   E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSAVNWDPVDQTVLANEQVIDG----CGWRSGAPVVRKEIPQWFIKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +    +   ++           GL     +    +        PD    + YV
Sbjct: 206 LDQLDGWPDKVKAMQRNWIGRSEGLEFSFAVEGKEERLSVYTTRPDTLMGVTYV 259



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 114/279 (40%), Gaps = 41/279 (14%)

Query: 232 IDALTNYLTTTGYL---DNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y          D     +A +W P D ++ G +    H +Y   F         
Sbjct: 493 FMESSWYFARYCCPEADDAMLTEEANYWLPVDQYIGGVEHAILHLLYARFFHKLLRDAGL 552

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++++ P  K++ + G +   G K+SKS GN +DP E+IE+ G D +R F++      +  
Sbjct: 553 VTSDEPF-KRLLTQGMVNKDGSKMSKSKGNTVDPQEMIEQYGADTVRLFMMFTAPPEQSL 611

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSR 396
            ++  G+         +G    + R  S+  +     D +     A +   +++      
Sbjct: 612 EWNDKGV---------DGASRFLRRLWSLSYQHLNAGDKVALDVDALSGEQKALRRKTHE 662

Query: 397 VLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + ++ ++++ +   + A+A V+ L +E+ ++              DR+   L V  E +
Sbjct: 663 TIAKVSDDIERRQTFNTAIAAVMELCNEISKF-------------EDRSEQGLAVEREAL 709

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
               +LL   VP +A++++          N  + ++D+ 
Sbjct: 710 EAAILLLSPIVPHVAHELWGKFGHEGNVVNATWPTVDEA 748


>gi|294674108|ref|YP_003574724.1| valine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472463|gb|ADE81852.1| valine--tRNA ligase [Prevotella ruminicola 23]
          Length = 902

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/443 (16%), Positives = 138/443 (31%), Gaps = 49/443 (11%)

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T +  + D        +    D           L++       E Y    G         
Sbjct: 312 TIDIFNPDGTISEQSPLYVGMDRMDCRKQISKDLQEAGLMERIEDYINKVGYSERNPDTA 371

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         ++D  +SR+   W
Sbjct: 372 IEPRLSLQWFLKMQHFADIALPPVMNDELKFYPAKYKNT-YKNWLENIQDWCISRQ-LWW 429

Query: 217 GIKI---PDDPQY---------------------------------IMYVWIDALTNYLT 240
           G +I     D +                                   +  W  +    ++
Sbjct: 430 GHRIPAYYYDEEKFVVAETAEEALELARKESGNANLQMSDLKQDEDALDTWFSSWLWPIS 489

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++ P   + K++ P    V G DI+ F    +           P     F+     
Sbjct: 490 LFDGINTPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGEEYMGTFPFKNVYFTGIVRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DPIE+IE+ G D +R  ++     G D  +D+   ++  N      
Sbjct: 550 KLGRKMSKSLGNSPDPIELIEKFGADGVRMGMMLSAPAGNDILFDEALCEQGRN------ 603

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I    A   + +   +   +   E+ +  +   I  AL  V
Sbjct: 604 FNNKIWNAFRLVKGWKVADIEQAEAGKIATKWFEAKLKQTNAEVEDLFKKYRISEALMAV 663

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L  +     Y +  KP  +              T+E    L  +L  F+P +  +++ 
Sbjct: 664 YKLFWDEFSSWYLEMVKPAYINGEPLPIDKATYDKTLEFFEILLKMLHPFMPFITEELWQ 723

Query: 476 ILFVADENRCFQSLDQRLKPGFM 498
            L+   +      +  +L     
Sbjct: 724 HLYDRKDGESIMKVSLKLDAPTK 746



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 51/168 (30%), Gaps = 18/168 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GRQPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + D++          L  S  +D    T ++    
Sbjct: 92  VKKLAGEGIKKRDLTREQFLKHAWDWTDEHGGIILKQLRRLGASCDWDRTAFTMDETRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +   ++  + +KG IY+G     +  +     + +EV    +  +   
Sbjct: 152 SVIKVFVDLYNKGLIYRGLRMVNWDPKALTALSTEEVIYKEEKSHLFH 199


>gi|289423107|ref|ZP_06424922.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156438|gb|EFD05088.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 1041

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 76/461 (16%), Positives = 162/461 (35%), Gaps = 35/461 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN-FRDMADVLDISYDDFI 95
           ++      + F    D  G+           T              ++   L      F 
Sbjct: 332 YNMGRKYSLPFVQPVDSEGKFT--------TTPWEGKFVMEEGLDVEIIKWLAAENKLFS 383

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           +   + ++  C      +        G Y     L+D+   N++ V    +        N
Sbjct: 384 KIKVEHNYPHCWRCGTPL--VYYANPGWYIEMTKLKDKLIENNNGVNWYPEFVGQGRFGN 441

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYY---ESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
            ++  E + +    + Y    L  +   +   +  +   +    ++      + + L R 
Sbjct: 442 WLE--ELKDWAISRTRYWGTPLPVWKCEDCGCKTTVGSRQELAELAIEDVDPETIELHRP 499

Query: 213 TFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
             D       D          ++  W D+         Y         + +PAD    G 
Sbjct: 500 YIDEVHLKCPDCGKPMTRVPEVIDCWFDSGAMPFAQWHYPFEHKEDFDQLFPADYICEGI 559

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F+++   +  ++   P    + +   +   G+K+SKS GN I+P E+ ++ GVD
Sbjct: 560 DQTRGWFYSLLAVSTFVTGKAPYKNVLVTDLVLDKNGKKMSKSKGNTINPFEMFDKYGVD 619

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--- 380
           ALR++L+          +D+DGLK+ V +     + N  +     +  + DG+ P     
Sbjct: 620 ALRWYLLYVSPPWTPIRFDEDGLKEIV-SKFVGTLKNTYTFFT--LYANTDGIHPNDFFV 676

Query: 381 --GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                 E D  ILS  + +  E+ EN++   +++ + ++   +++   + Y    +    
Sbjct: 677 DYKDRPELDRWILSKFNNLKAEVEENLEIFEVNKTIRRMTEFLNDDLSNWYIRRSRRRFW 736

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                    +V   T EV+ +   L+  F P L+ +++  L
Sbjct: 737 GTELTQDKKSVYNTTYEVLTEFCKLIAPFAPYLSEEMYRNL 777



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K              N  P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 40  KNDPTYVFFEGPPTANGNPGIHHVISRTLKDWVCRYKTMSGYKVPRKAGWDTHGLPVELQ 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                       +  V    R +R M + +  S   DD   T +  +
Sbjct: 100 VEKQLGLSDKKAIEDYGVEDFCQKCRDSVFSYEREWRKMTERMAYSVDLDDPYITLDNNY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   +  K + +G +Y+G     Y  R        EV +G  
Sbjct: 160 IETLWWILDKFNKEGLLYEGHKILPYCPRCGTGLASHEVAQGYK 203


>gi|329922709|ref|ZP_08278261.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328942051|gb|EGG38334.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 1029

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 149/414 (35%), Gaps = 22/414 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL--RDEAYYNDDEVYKGA----DGQYYNA 152
            K  ++       +       Y        +   +D+   N++EV        +G++   
Sbjct: 375 SKEKYEHSYPFCWRCKSPLLYYAMESWFIETTAVKDQLIANNNEVTWYPGHVREGRFGKF 434

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKD 206
             + V W      ++          S         +   R N      E +   K  + +
Sbjct: 435 LEDLVDWNISRNRYWGTPLNVWVCDSCEGQFSPHSIGELRANAVGEVAEDLELHKPYVDE 494

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           + +     + G+   +    ++ VW D+ +       Y         + +PAD+   G D
Sbjct: 495 VKVKCPHCEGGV--MERTSEVIDVWFDSGSMPYAQYHYPFEDKEKFEQQYPADMICEGID 552

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+++   + L +   P    + +   +   G+K+SKS GNVIDP E+IEE G DA
Sbjct: 553 QTRGWFYSLLAVSTLFTGKAPYKAVMATGHILDENGQKMSKSKGNVIDPWEIIEEYGTDA 612

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPT-PGA 382
            R+ L+ + A      + K G+     + + + + N  +  ++   +  YD       G+
Sbjct: 613 FRWALLADSAPWNSKRFSK-GIVGEAKSKVVDTLVNTHAFLTLYAGIDGYDPKEHDFKGS 671

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNP 441
             + D  ILS  + ++Q + + +       A   + + V E+ + Y    +         
Sbjct: 672 DHKLDRWILSRLNSLIQVVDKGLAVNDFLNAAKAIEAYVDELSNWYIRRSRDRFWGSGLG 731

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           +           V+  L+ L+  F P L+  IF  L   +      F   D+ L
Sbjct: 732 EDKLAAYGTLTHVLLTLSKLMAPFTPMLSEDIFVNLGGGESVHLADFPQADEAL 785



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +            N  PHIGH    +I D + R+  + G  V+   G D HG  +    
Sbjct: 36  GKPNYVFYEGPPTANGAPHIGHVLGRVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K  V +    +R++ + +      D    T E  + 
Sbjct: 96  EKQLGISGKQEIENYGVEAFIKKCKASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   +   I DKG +Y+G     Y    +   +  EV +G +
Sbjct: 156 ESVWNILATIHDKGLLYRGHRVSPYCPCCQTTLSSHEVAQGYE 198


>gi|238758029|ref|ZP_04619210.1| Leucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238703783|gb|EEP96319.1| Leucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 860

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTAAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G   + D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVDIVFDVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 76/189 (40%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQIMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V               + TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLVFESTAKGATAPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LLQEALLAVVRMLYPFTPHICFTLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|320353933|ref|YP_004195272.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122435|gb|ADW17981.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 823

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 6/206 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 33  GRPKYYVLEMFPYPSGRIHMGHVRNYSIGDVIARYKRMQGFNVLHPMGWDAFGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    R     + +SY  D  + T    ++   + L+ K+ ++G IY
Sbjct: 93  MKRGIHPASWTYENIDYMRGQLKAMGLSYDWDRELATCGPEYYRWEQQLFLKMLERGLIY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +    +     ++V  G           PV      G+FF+++ Y ++LL+  
Sbjct: 153 RKETTVNWCDDCQTVLAREQVIDGT----CWRCDQPVLPKTMHGWFFKITDYAEELLADL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKD 206
           +    +   +           +GL  
Sbjct: 209 DKLGGWPEKVVTMQRNWIGKSTGLAC 234



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 97/237 (40%), Gaps = 37/237 (15%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKIS 304
           A + P D ++ G +    H +Y   F         LS + P    + + G ++  G K+S
Sbjct: 527 AYWLPVDQYIGGVEHAILHLLYARFFTKMLRDLGYLSVDEPFT-NLLTQGMVIKDGAKMS 585

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E+I++ G D +R F +      +D  ++  G++         G    ++R
Sbjct: 586 KSKGNVVDPNELIQQYGADTVRLFSLFAAPPERDLEWNAQGVE---------GASRFLNR 636

Query: 365 SVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
              +++++             A  E   ++     + ++ + E+++ N   + A++ V+ 
Sbjct: 637 VYRLVVQNLSCFQQPAAVDLTALNEPSRALYRKTHQTIRRVTESIESNFHFNTAISGVME 696

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           LV+             L  T  D       V  E +  +  LL   VP    +++ I
Sbjct: 697 LVN-------------LATTQTDE-PIDPAVQRETLETILTLLFPMVPHFCEELWAI 739


>gi|78049240|ref|YP_365415.1| valyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|90108448|sp|Q3BP98|SYV_XANC5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|78037670|emb|CAJ25415.1| valyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 980

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/415 (17%), Positives = 138/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 408 IEPYLTDQWFVKMDALAKRGLELVESGQIKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 465

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 466 GHRIPAWFDEAGTCYVGHDEAEVRAKHGLGADVALHQDSDVLETWFSSQLWPFSTLGWPD 525

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +    A++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 526 AQAMAERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 585

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 586 KMSKSKGNVLDPLDIIDGISIEDLVAKRTHGLMQPRMAEKIEKATRKEFPDGIIVHGADA 645

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 646 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 699

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +   E   +  N         +         D + +  KP  L   +
Sbjct: 700 RTEAEKWILARLDKATAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNNQD 758

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       QS  Q
Sbjct: 759 ADAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPRLGITTATISLQSFPQ 813



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGQTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|254487076|ref|ZP_05100281.1| valyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043945|gb|EEB84583.1| valyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 1025

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 22/270 (8%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +++  DP  ++  W  +    + T G+ ++    K K++P    + G+DIL F    W A
Sbjct: 582 VRLWRDPD-VLDTWFSSGLWPIGTLGWPEDTPELK-KYFPTSDLITGQDILFF----WVA 635

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L + K++  +   LH      KG+K+SKS+GNVIDP+E+I+E G DALR+    
Sbjct: 636 RMMMMQLDVVKQIPFNTVYLHGLVRDAKGKKMSKSVGNVIDPLEIIDEYGADALRFTNAA 695

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---- 387
             + G     D   +      +    I N    +    + + D +     + T+ D    
Sbjct: 696 MASLGGALKLDTARIAG--YRNFGTKIWNAHRFAEMNGVFEADVVNVAYTSHTQVDHTLN 753

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
           + I+   +RV +E+   +++   + A   + + V     D Y +  KP  L + +   A+
Sbjct: 754 KWIIGETARVREEVDAALEHYRFNDAANALYAFVWGKVCDWYVELSKP--LLQDDAPEAT 811

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                   V+ Q  ++L   +P +  +++ 
Sbjct: 812 ETRQTLKWVLDQCLVMLHPIMPFITEELWQ 841



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 59/184 (32%), Gaps = 31/184 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +       N   H+GHA+   + D+L R+HR+ G D L+  G D  G  +  A +N
Sbjct: 36  ETYCVMIPPPNVNGSLHVGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIALQLAVEN 95

Query: 65  -------------------AGVTTKVFVDQ-NSRNFRDMADVLDISYDDF---------- 94
                                   K           + +    D S + F          
Sbjct: 96  KLAESGIKRTDLTRDEFLKHAWAYKESTADTIVGQLKRLGSSCDWSRNAFTMSGAPGDTR 155

Query: 95  -IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
                    HD    ++ ++ ++G IY+G     +  R E   +D EV       +    
Sbjct: 156 VGHENSPNFHDAVIKVFVQMYNEGKIYRGKRLVNWDPRFETAISDLEVENTEVPGHMWHF 215

Query: 154 HNPV 157
             P+
Sbjct: 216 KYPL 219


>gi|300715833|ref|YP_003740636.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061669|emb|CAX58785.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 860

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPTDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFVKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDTLESWPEQVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 80/194 (41%), Gaps = 22/194 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +    +     +  +  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLAFEHSEKGPTVALDIASLNDDQKSLRRELHKTIAKVSDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   +++  DRA     +  E ++ +  LL  F P     ++  L  
Sbjct: 732 LMNKL-----ARAP---QESEQDRA-----LMQEALQSVVRLLYPFTPHACFSLWQALGG 778

Query: 480 AD--ENRCFQSLDQ 491
               +N  +   D+
Sbjct: 779 EGDVDNAPWPQADE 792


>gi|256061046|ref|ZP_05451202.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325047|ref|ZP_05964244.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301027|gb|EEY04524.1| valyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 910

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 128/385 (33%), Gaps = 51/385 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            DE  Y +          + +    P++    + ++          ++        I+P 
Sbjct: 352 MDERGYLEKIDDHTHAVPHGDRGGVPIEPYLTDQWYVNAGELAKPAMAAVRDGRTQIVPK 411

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---------------------- 226
               +        ++   +SR+   WG  I     P                        
Sbjct: 412 NW-EKTYFDWMENIQPWCVSRQ-LWWGHQIPAWYGPDGHCFVEKSEAEAKAAARAHYGED 469

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                   ++  W  +     +T G+ D      A ++P  + V G DIL F    W A 
Sbjct: 470 VALERDTDVLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVAR 524

Query: 279 LLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L   +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L   
Sbjct: 525 MMMMGLHFMEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIM 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D   D   +      +    + N  +R   M             A    +  IL+
Sbjct: 585 AAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILT 641

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             +   + + E +     + A       V     D Y +  KP      +    +     
Sbjct: 642 ELTLATRAVTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQAT 700

Query: 451 TVEVIRQLAILLQAFVPKLANKIFD 475
               + Q+  LL  F+P +  +++ 
Sbjct: 701 AAYCLDQVYKLLHPFMPFMTEELWS 725



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +           H+GHA    I D++ RF R+ G +VL+  G D  G       + 
Sbjct: 36  DPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                K           F+++  +             R +    D S + F  T ++   
Sbjct: 96  QLAERKEPNRHAMGREKFIERIWQWKAESGGMISNQLRRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ--WME 161
                ++  +  +G IY+      +  +     +D EV       +      P++    +
Sbjct: 154 RAVLEVFVTLYKQGLIYRDKRLVNWDPKLLTAISDIEVESREIKGHLWHFRYPLENVPFD 213

Query: 162 EEGYF 166
            E   
Sbjct: 214 PENPH 218


>gi|326626975|gb|EGE33318.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 891

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 521 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 580

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    KK+   G +L                           KG          
Sbjct: 581 DAGMVTSDEPAKKLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 640

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 641 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 696

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 697 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDVGRRQTFN 754

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 755 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 801

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 802 TLWQELGGEGDIDNAPWPVADEQ 824


>gi|310766276|gb|ADP11226.1| valyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 951

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 143/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAAGNVYVARSEEEARAENNLGADMVLTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N    +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NAAALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLQDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEHDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            A + +D  IL+  +R ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 LALSLADRWILAEFNRTVKAYREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +        V V+  L  L    +P +   I+  +     ++D+    Q + +
Sbjct: 727 GNEAQLRGTRNTLVNVLEALLRLAHPIIPFITETIWQRVKVLKNISDDTIMLQPMPE 783



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|218295051|ref|ZP_03495887.1| isoleucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244254|gb|EED10779.1| isoleucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 1047

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 140/414 (33%), Gaps = 61/414 (14%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E        +      P+ +   E +F R +A++++L+    +     +P   +     
Sbjct: 378 KEEQILHSYPHCWRCSTPLMYYATETWFIRNTAFKEELIRK--NQEINWVPPHIKEGRYG 435

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP------------------------------DDPQ--- 225
                L D +LSR    WG  +P                               DP    
Sbjct: 436 EWLRNLVDWALSRNR-YWGTPLPIWVCEACGKEEAIGSFAELKARAKTPLPEPFDPHRPH 494

Query: 226 ------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                             Y++ VW D+      +  Y    +    + +PAD    G D 
Sbjct: 495 VDRVELGCACGGTMRRVPYVIDVWYDSGAMPFASIHYPFENEAEFREAFPADFIAEGIDQ 554

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F++++    +L  ++     +     +  KG+K+SKS GNV+DP ++I E G DAL
Sbjct: 555 TRGWFNSLHQLGVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADAL 614

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAF 383
           R+++        D  +  + L +    D    + N+ S  V+    D       P P   
Sbjct: 615 RWYIYISAPPEADRRFGPN-LVRETVRDYFLTLWNVYSFFVTYANLDRPNLKSPPPPKER 673

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP 441
            E D  +L+    ++Q + E ++      +   +   V       Y    +    K  + 
Sbjct: 674 PELDRWLLARMQDLIQRVTEALEAYDPTTSSRALRDFVVEDLSQWYVRRGRRRYWKNEDA 733

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
               +      E +  +A L   F P LA  ++  L  + +    +S+     P
Sbjct: 734 LDRESAYATLYEALVLIAKLSAPFTPYLAEALWQNLVRSVDEGAKESVHLADWP 787



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 47/164 (28%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +  +       N  PH+GHA      D+  RF  + G       G D HG  +   
Sbjct: 35  KGAPRYTVYEGPPTANGMPHVGHAQARSYKDLFPRFKTMQGYYAPRRAGWDTHGLPVELE 94

Query: 62  AQNA--GVTTKVFVDQNSRNFRDMADVLDISYDDF-----------------IRTTEKRH 102
            +      + +         F         +Y+                     T    +
Sbjct: 95  VEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERLAYWVDLENAYATLHPTY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++ D+G +Y+      Y  R     +  E+  G  
Sbjct: 155 IESIWWSLKRLFDRGLLYRDHKVVPYCPRCGTPLSSHELALGYK 198


>gi|269215644|ref|ZP_06159498.1| valine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131131|gb|EEZ62206.1| valine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 901

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 131/389 (33%), Gaps = 41/389 (10%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             +E    D          +     + ++    E +F  +   +               P
Sbjct: 340 WFEEHGLLDRIEDLNHSVMHCYRCDSALEPWLSEQWFVAVDKLKGPATQVVADGRIAFYP 399

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------D 222
             R  +        LKD  +SR+   WG +IP                            
Sbjct: 400 D-RWKQSYMTWMENLKDWCISRQ-LWWGHRIPVFYCDACGWEDASLEDVDACPHCGAEVR 457

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +      T G+ D+P   +    P  + V  +DI+      +   +   
Sbjct: 458 QDEDVLDTWFSSQLWTFATQGWPDDPSLMQGHH-PTKVLVTARDIIALWVARMIMSSLYF 516

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  +P          +   G ++SKS GN +DP+++IE  G DA+R+ L+  +   +D  
Sbjct: 517 TDEIPFEDVFIYATILAKDGSRMSKSKGNGVDPMQLIETYGADAMRFNLLTLVTGTQDVR 576

Query: 341 YDKDGLK----KRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCS 395
           +D + L+    +    + A G    +  +   +  + +G  P  P   T +D  + S  +
Sbjct: 577 FDAEKLEDGTFESPRTEAARGFVTKIWNASRFVQMNLEGFTPGAPEIRTSADAWMFSRLA 636

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           ++++ +   ++          +         D Y +  +     K  PD         V 
Sbjct: 637 KLVRSVTSGIEEYRFGDVAHDLYEFFWNEFCDWYIELSR--VSLKGAPDERLAAQRNLVF 694

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           V+     LL   +P +   I++ +  A +
Sbjct: 695 VLDNALRLLHPAMPFVTEAIWEKMPHAGD 723



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA +  I D   RF R+ G    +  GTD  G            
Sbjct: 51  TVVIPPPNVTGMLHMGHALDDTIQDTFVRFCRMKGYSTRWILGTDHAGIATQTKVDKKLK 110

Query: 68  ----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                               +  +      +    +  S  +DD   T    +    R +
Sbjct: 111 EEGVSRLEIGREKFLEACWDWRREYGGIIVEQIKRMGCSVDFDDEKFTMSPEYAKAVRKV 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +      G +Y+G     +        +DDE     +  +      P+
Sbjct: 171 FVDWYHDGLVYRGKRIVNWCPSCTTAISDDEAEYRDEDSHLWHLRYPL 218


>gi|167630718|ref|YP_001681217.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687869|sp|B0TBJ3|SYL_HELMI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167593458|gb|ABZ85206.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 846

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y      YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 30  EGRPKYYCLEMFPYPSGNLHMGHVRVYSIGDVVARFKTMQGYNVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R     + ISYD    + T    ++   + L+ ++   G  
Sbjct: 90  AIKHKVPPADWTWSNIANMRRQLQSMGISYDWEREVATCHPDYYKWTQWLFLQLYKAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +         +++V  G            V+    E +FFR++ Y  +LL  
Sbjct: 150 YKKKANVNWCPDCATVLANEQVVDG----LCERCDATVEKKALEQWFFRITDYAQRLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
               P +   ++   E       G
Sbjct: 206 LNKLPGWPDKVKTMQENWIGRSEG 229



 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 98/287 (34%), Gaps = 47/287 (16%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D              Y T              +W   D ++ G +    H +Y   F   
Sbjct: 499 DTMDTFVCSSWYFLRYCTPKDKDHAFLQEDVDYWMNVDQYIGGVEHAILHLMYARFFTKV 558

Query: 282 AN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                        + + + G +L  G K+SKS GN + P E+I + G D  R F++    
Sbjct: 559 LYDLKLVKVEEPFENLLTQGMVLMGGSKMSKSKGNTVSPEEIIAKYGADTARLFILFAAP 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA------------ 382
             +D  +   G++         G    + R   ++    D +   PG             
Sbjct: 619 PERDLEWSDRGVE---------GAHRFLHRLWRLVYAYSDQIASVPGTMVGYGKGQPNGS 669

Query: 383 -------FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                      D  ++ V    ++++ E++ Q    + A++ ++ +V+   +Y D     
Sbjct: 670 KGDNLFSLNSDDRELVRVAHYTVKKVTEDIGQRFNFNTAVSAIMEMVNYFYQYKDKV--- 726

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 P     +  +  + + +L ++L  F P +  +++ ++   +
Sbjct: 727 ------PAEQQNIP-LVKDALARLVLVLAPFAPHICEELWQVIGGGE 766


>gi|260459773|ref|ZP_05808027.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034575|gb|EEW35832.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 927

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 127/358 (35%), Gaps = 20/358 (5%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEG-YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           +    +  Y+    N   W      ++                       +    E    
Sbjct: 408 IPGNWEKTYFQWMENIEPWCISRQLWWGHQIPAWYGPDGRVFVEKTEEEALSAAIEYYLA 467

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           ++   K     +       +I    + ++  W  +     +T G+ D     K  ++  D
Sbjct: 468 LEGPWKAWVEDKLENYKPGEILTRDEDVLDTWFSSALWPFSTLGWPDQTPELKT-YYQTD 526

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDP 313
           + V G D++ F    W A ++   L    +   H   +H       G+K+SKS GNV+DP
Sbjct: 527 VLVTGFDLIFF----WVARMMMMGLHFMDEEPFHTVYMHALVRDKNGQKMSKSKGNVVDP 582

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +++I+E G DALR+ L    A G+D   D   +      +    + N  +R   M     
Sbjct: 583 LDLIDEYGADALRFTLAVMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNEVAR 639

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
           +       A    +  IL+  +R  +E+ + + +   + A       V     D Y +  
Sbjct: 640 NDDFWLNDAKLAVNRWILTELTRAAREVTDGITSYRFNEAAGAAYRFVWNLFCDWYLELL 699

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           KP     T+    +        V+ ++  LL   +P +  +++     A E +  +SL
Sbjct: 700 KP-VFMGTDEAAKAESRACVAFVLDEIYKLLHPMMPFMTEELWAQ--TAGEGKERESL 754



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 22/172 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-------- 58
             I           H+GHA    + D+L RF R+ G +VL+  G D  G           
Sbjct: 38  FTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKNVLWQPGMDHAGIATQMVVERQL 97

Query: 59  -AKAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             K      +T + F+++                + +    D S + F  T ++      
Sbjct: 98  MEKQIHRRDLTREQFIEKVWEWKAESGGAIFNQLKRLGASADWSRERF--TMDEGLSKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             ++  +  +G IYK      +  +     +D EV +            P++
Sbjct: 156 LEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDLEVEQQEVNGNLWHFRYPIE 207


>gi|319956864|ref|YP_004168127.1| valyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419268|gb|ADV46378.1| valyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 877

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 147/405 (36%), Gaps = 58/405 (14%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++E Y    E ++   G  Y    N V+    + + F    +    +           P 
Sbjct: 331 KEEGYLEKVEEHRHQVGHCYR-CKNIVEPYVSKQW-FVKKEFAADTIRRVNEGEVRFFPE 388

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------------------------ 220
              N   +     L+D  +SR+   WG +I                              
Sbjct: 389 HWIN-SFNAWMRDLRDWCISRQ-LWWGHQIPVMYCDDCGHQWAFEGERPTECPKCGSHNI 446

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH- 271
             DP  ++  W  +     +T G+ +          +    +F+P  L + G DIL F  
Sbjct: 447 HQDPD-VLDTWFSSGLWPFSTLGWGNGEALKGVKWFENDLKEFYPNSLLITGFDILFFWV 505

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +      L+  LP P           KGEK+SKS GNVIDP+ +I++   DALR+ L 
Sbjct: 506 ARMLMMGEKLTGELPFPHVYLHALVKDEKGEKMSKSKGNVIDPLVMIDKYSADALRFTLA 565

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                G+D    ++ L++  N    N + N  +  + M ++ +D + P     T     +
Sbjct: 566 VLAVQGRDIRLSEEKLEQSRN--FTNKLYNAANYLL-MNVECFDELDPEKIQ-TPLGRYM 621

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           LS     ++E R  +     + A   +   +            W ++ +  DRAS  +  
Sbjct: 622 LSRFYLAVEETRNYIDQYRFNDAATILYRFLWG------EFCDWGIELSKADRAS--VPE 673

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
              + R+   LL  F+P L   ++  L   D  +  +S+  R  P
Sbjct: 674 LGSIYRESMKLLHPFMPYLTEYLYQRLGSTDLEQS-ESIMIRPYP 717



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 22/169 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 38  QEGKTFCIMMPPPNVTGHLHIGHALTFTLQDIIVRYKRMDGYKTLWQPGTDHAGIATQNV 97

Query: 62  AQN---AGVTTKVFVDQ-----------------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +        TK  + +                  +   R +      S + F  T ++ 
Sbjct: 98  VEKQLLEQGKTKEEIGREAFLELAWKQKENSGNAITAQLRRLGVSPAWSRERF--TMDEG 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             +  +  +KK+ D+G I +G Y   +   D A  + +  Y+  +G+ Y
Sbjct: 156 LANAVKHAFKKMYDEGWIVQGNYMINWCTHDGALSDIEVEYEEHEGKLY 204


>gi|170025896|ref|YP_001722401.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|169752430|gb|ACA69948.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 965

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 134/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGNVYVGRDEAEVRRDNNLGAEVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTDALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  ++V+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIQVLEALLRLAHPIIPYITETIWQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|51594881|ref|YP_069072.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|153948685|ref|YP_001402499.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|186893891|ref|YP_001871003.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81825944|sp|Q66F11|SYV_YERPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51588163|emb|CAH19769.1| valine tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|152960180|gb|ABS47641.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|186696917|gb|ACC87546.1| valyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 965

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 134/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGNVYVGRDEAEVRRDNNLGAEVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTDALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  ++V+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIQVLEALLRLAHPIIPYITETIWQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|238019263|ref|ZP_04599689.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
 gi|237863962|gb|EEP65252.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
          Length = 822

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA         NPV+  +   +F R++ Y D+LL+ 
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDGA----CWRCDNPVEKKDLSQWFLRITEYADRLLTD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDHWPQRVKLMQKNWIGRSEG 229



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 63/343 (18%), Positives = 118/343 (34%), Gaps = 44/343 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E+ G            L          +     +E            
Sbjct: 429 QRYWGVPIPVVYCEKCGEQLVTEEELPVRLPEDVKFESGAVSPLATSESFLNTTCPKCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYTDAKNDQAPFDKKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLGLIEANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++      +D  +   G++              + R   ++    +    
Sbjct: 599 TYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIVDAYNEEAKK 649

Query: 379 T-PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              G  T+ + ++     RV++++ E++  N   + A++ ++ LV+ +            
Sbjct: 650 NVTGELTKDEFALRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMY----------- 698

Query: 437 KKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILF 478
              + D+A T+      E+   L +LL  FVP +  +++  L 
Sbjct: 699 --AHKDKAETINSALANELTHSLLLLLAPFVPHMTEELWHELG 739


>gi|15791298|ref|NP_281122.1| valyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169237056|ref|YP_001690256.1| valyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74568687|sp|Q9HMG9|SYV_HALSA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|254783553|sp|B0R841|SYV_HALS3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10581937|gb|AAG20602.1| valyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167728122|emb|CAP14910.1| valine--tRNA ligase [Halobacterium salinarum R1]
          Length = 881

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 126/388 (32%), Gaps = 20/388 (5%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
               T + +         I       W+   D+    D      A+    +     V+W 
Sbjct: 330 DTEPTEQSVGSCWRCDTAIEILSKEQWFVEVDQDRILDA--AADAEWVPEHMHDRLVEWT 387

Query: 161 EEEGYFF---RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           E   + +   R   +   + ++  +         R    +   +      +      + G
Sbjct: 388 EGMDWDWVISRQRVFATPIPAWECNECGHWEIAGREQAPVDPTEDDPAVEAC----PECG 443

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--W 275
                    +M  W+D+    L  +G+ +     + +    DL   G DI+R  A Y   
Sbjct: 444 GDDWAGETDVMDTWMDSSITPLHLSGWPEGTTLDEFES--VDLRPQGHDIIRTWAFYTLL 501

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L+   P    + +       G K+SKS GN + P E I E   DA+R  L      
Sbjct: 502 RTGALTDEQPWDDVLVNGMVFGEDGNKMSKSRGNFVQPDEAIAEYSADAVRQALALGGRP 561

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +    +K    +     + N+   S      D D       A+ ++D  +LS  S
Sbjct: 562 GSDVQFQWKEVKSA--SRFLTKLWNITKFSTGHF--DEDTPAIQDPAYRDADRWLLSELS 617

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            V +++ E M      RAL  +     E   D Y +  K   L    P   +   +    
Sbjct: 618 TVCEDVDEAMSEYRFDRALRSLREFAWEDLADDYVELVK-GRLYNGRPGERAAAEHTLYT 676

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  +  LL  F P    +I+  L   +
Sbjct: 677 AVTAVTRLLAPFSPHTTEEIWQSLPGTE 704



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I T   YP+   H+GHA      D +AR+ RL G  VLF  G D HG       +   
Sbjct: 38  YVIDTPPPYPSGNLHLGHALGWSYIDFVARYRRLKGDAVLFPQGWDCHGLPTEVKVEEVN 97

Query: 67  V-------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWK 111
                             + +      +     L  S  +D   RT +  +    +  + 
Sbjct: 98  DIHRTDVPSDEFREMCIDWTEDRIDEMKATMQELGFSQDWDSEYRTMDPEYWGKTQESFS 157

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           +++D G +Y+  +   +  R E    D EV     +G  +    + V   + E    R  
Sbjct: 158 EMADAGMVYRDEHPVNWCPRCETAIADAEVENIDREGTLHYVTFDGVDNGDIEIATTRPE 217

Query: 171 AYQDK 175
                
Sbjct: 218 LLAAC 222


>gi|238795402|ref|ZP_04638917.1| Leucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720521|gb|EEQ12322.1| Leucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 860

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G   + D++ S          PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVDIVFDVADSEDKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V               + T+  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLVFDHTAKGATAPLDIASLTDEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R             +P        +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-------------SPQETEQDRALLQEALLAVVRMLYPFTPHVCFTLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|62179248|ref|YP_215665.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62126881|gb|AAX64584.1| leucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713713|gb|EFZ05284.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 891

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 521 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 580

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 581 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 640

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 641 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 696

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 697 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 754

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 755 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 801

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 802 TLWQELGGEGDIDNAPWPVADEQ 824


>gi|145571595|gb|ABP80701.1| valyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 897

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 130/394 (32%), Gaps = 77/394 (19%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +K ++  ES     +P +  N   S+++  ++D  +SR+  
Sbjct: 322 TIIEPWLTDQWYVSTKPLAEKAIAAVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-L 379

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                             + ++  W  +     +T G+
Sbjct: 380 WWGHRIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSGLWTFSTLGW 439

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
               +  K    P D+ V G DI+ F    +   +  L+  +P             +G+K
Sbjct: 440 PQQTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLSTHLTGQIPFKTVYVHGLVRDGQGQK 498

Query: 303 ISKSLGNVIDPIEVIE-------------------------------------EVGVDAL 325
           +SKS GNV+DP+++++                                       G DAL
Sbjct: 499 MSKSKGNVLDPLDIVDGITLDELLTKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDAL 558

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+      + G+D  +D   ++     +  N I N  +           G+   P   + 
Sbjct: 559 RFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAANFVFENTEGKDTGVNGEPVELSS 616

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-D 442
            D  I+S   R   E+   ++      A   +   + +     Y +  KP    +T   +
Sbjct: 617 VDRWIISALQRTEAEVTRQLEAFRFDLAAQALYEFIWDEYCAWYLELVKPLLWDETASVE 676

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R        V V+     L   F+P +  +I+  
Sbjct: 677 RQRGTRRTLVRVLETALRLAHPFMPFITEEIWQR 710



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 22/156 (14%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------------------KAA 62
           +GH +   I D L R+ R+ G + L+  GTD  G                       +  
Sbjct: 1   MGHGFNNAIMDALIRWRRMQGRNTLWQPGTDHAGIATQMVVERQLAAQGTSRHDLGREKF 60

Query: 63  QNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                  K     N  R  R +   +D S + F  T +    +  +  + ++ + G IY+
Sbjct: 61  LEKVWQWKEESGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVKEAFVRLHEDGLIYR 118

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           G     +  +     +D EV    +  +      P+
Sbjct: 119 GKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 154


>gi|251791283|ref|YP_003006004.1| valyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539904|gb|ACT08525.1| valyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 951

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDNGKVYVGRDEAEVRRENNLAADVALRQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                KA   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPELKAFH-PSSVMVSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFHTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWILAEFNRTVKAYREALDSYRFDLAANVLYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRHTLVTVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPL 204


>gi|84490249|ref|YP_448481.1| isoleucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373568|gb|ABC57838.1| IleS [Methanosphaera stadtmanae DSM 3091]
          Length = 1055

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/421 (18%), Positives = 150/421 (35%), Gaps = 34/421 (8%)

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T E  H +            G  ++      Y    + +    ++      Q  + +  P
Sbjct: 378 THELEHANALLNYGTIDHRVGFCWRCKTPIIYIATKQWFIKVTQIKDQMLEQVDSVEWVP 437

Query: 157 VQWMEE---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             W  E     +      +      Y+          +  ++V+   K  LK LS     
Sbjct: 438 -SWAGESRFRNWVENARDWTISRQRYWGIPLPIWTCSDCGSKVVIGSKEELKTLSGDDTL 496

Query: 214 ----------------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                            + G  +   P  ++ VWID+         Y  NP  +  +++P
Sbjct: 497 EGDFVHRPHVDNITIPCECGSTMHRVPD-VLDVWIDSGVAGWAALHYPQNPSENFDEWFP 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            D    G D     F++            P  K +     +   G+K+SKSLGNV+ P E
Sbjct: 556 YDFITEGHDQTRGWFYSQLGLGVAAFGKAPYKKVLMHGFTLDEDGKKMSKSLGNVVSPEE 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYD 374
           VIE+ G D LR++L+       D  +  D ++    + L N + N+    +  M L +++
Sbjct: 616 VIEKYGADVLRFYLLDANKPWDDLKFHWDEVQNS--SKLFNILWNVYYFATTYMSLDNFN 673

Query: 375 GMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--F 428
                       E D  I S  + +++ + E++++ + +RA  ++   +       Y   
Sbjct: 674 PTKHNRDDLIFREEDLWIESRINSLIKSVGEDIESLVFNRATEKITDFILEDLSRWYVRL 733

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              + W  +  +PD+     Y     ++ L ++L    P +  +I+  L    E    +S
Sbjct: 734 IRGRTWV-ESDDPDKLGA-YYTLYYTLKNLIMVLAPISPHVTEEIYQNLVRGVEEDAPES 791

Query: 489 L 489
           +
Sbjct: 792 V 792



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 20/165 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K        Y + + H+G A+   I D   R+  ++G  +    G D HG  I   
Sbjct: 36  ENRPKYSFLDGPPYCSGRIHLGTAWNKTIKDSFLRYKSMNGYSLRRQAGWDTHGLPIEHK 95

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +                        K F  +N  +       + +   + D   T +  
Sbjct: 96  VEELLDIKSKQEIEEKYGIDNFVEKCKEFAIKNKEDMTQQFKQMGVWMDWQDPYVTYDNG 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + ++C    K+   +  + +      +    +    + E+  G  
Sbjct: 156 YMESCWWTLKQADKRDLLTQDKRVITWCPHCQTALANAEIEYGDK 200


>gi|330432974|gb|AEC18033.1| valyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 958

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 136/398 (34%), Gaps = 84/398 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEQGNIYVARNEAEVRQKYQLSDDIKLKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +N    +    P ++ + G DI+ F       F +           +P      +     
Sbjct: 497 NNTKDLQMFH-PTNVLITGFDIIFFWVARMIMFTMHFIKDKNGKPQVPFKTVYVTGLVRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G K+SKS GNVIDP+++I+ +                                     
Sbjct: 556 ENGAKMSKSKGNVIDPLDMIDGIDLESLVAKRTGNMMQPQLAAKIEKATRKEFPEGIVAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPT 379
           G DALR+ L    + G+D  +D   L+     +  N + N    ++  I  KD       
Sbjct: 616 GTDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWNASRFALMNINGKDCGYGENK 673

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D  IL+  ++ ++  R+ +       A   +   +     D Y +  KP  L 
Sbjct: 674 EMELSLADRWILAEFNQTVKTFRQALDQYRFDIAATTLYEFIWNQFCDWYLELTKP-VLN 732

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +  +     +  + V+ Q+  L    +P +  +I+ 
Sbjct: 733 GGSEIQQRGTRHTLITVLEQILRLAHPIIPFITEEIWQ 770



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 23/180 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
               I+          H+GHA++  + D L RFHR++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFHRMEGDNTLWQAGTDHAGIATQMVVER 98

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T +    
Sbjct: 99  KIAAEEGKTRHDYGREAFIEKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+   E+ 
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGEKT 216


>gi|121998924|ref|YP_001003711.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166231613|sp|A1WYZ7|SYL_HALHL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121590329|gb|ABM62909.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 817

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  SARPKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYKRMQGYNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    R+    L   YD    + T +  ++   + L+ ++  KG +
Sbjct: 90  AMERGVPPAAWTRENIGAMREQLKGLGFGYDWSRELATCDPEYYRWEQWLFIRLYRKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V +G            V+  E   +F R++ Y D+LL  
Sbjct: 150 YRDTAAVNWDPVDQTVLANEQVIEG----RGWRSGALVERREIPQWFLRITDYADELLEA 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 206 LDELDGWPEQVRNMQRNWIGRSEG 229



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 95/260 (36%), Gaps = 33/260 (12%)

Query: 232 IDALTNYLTTTGYLDN---PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y       D        +A  W P D ++ G +    H +Y   +         
Sbjct: 495 FMESSWYFARFACADQDGAMLDERADHWTPVDQYIGGIEHAVLHLLYARFYHKVLRDEGL 554

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +S++ P   ++ + G +L  G K+SKS GN +DP E+++  G D +R F +      +  
Sbjct: 555 VSSDEPFT-RLLTQGMVLKDGTKMSKSKGNTVDPQELVDRFGADTVRLFTMFAAPPDQSL 613

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +   G++          +  LV   V             P A +++   +       + 
Sbjct: 614 EWSDSGVEGAYR--FLRRLHGLVRDHV----AAGPAPALDPQALSDTQRDLRRKVHETIA 667

Query: 400 EIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +  +++  +L  + A+A V+ L +             L K   D A+    V  E +   
Sbjct: 668 KASDDVGKRLTFNTAIAAVMELCNA------------LGKAQDDSAAG-RAVMQEGLEAA 714

Query: 459 AILLQAFVPKLANKIFDILF 478
            ++L    P L + ++  L 
Sbjct: 715 VLILAPITPHLCHHLWFQLG 734


>gi|84686162|ref|ZP_01014057.1| valyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665689|gb|EAQ12164.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 1030

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 107/277 (38%), Gaps = 10/277 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ +      AK++P D+ V G DIL F    +   
Sbjct: 593 PVWRDPD-VLDTWFSSGLWPIGTLGWPEETP-ELAKYFPTDVLVTGFDILFFWVARMMMM 650

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +    P             KG+K+SK+ GNVIDP+E+I+E G DALR+      A G
Sbjct: 651 QLAVVEKEPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIIDEYGADALRFTNASMAAVG 710

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                 ++ +K     +    + N    +     K   G  P     T  ++ I+   +R
Sbjct: 711 GVLKLSEERIKG--YRNFGTKLWNAARFAEMNDCKPVPGFDPASVNAT-VNKWIVGETAR 767

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           V + + E +     + A   + + V     D Y +  KP  L   +    +        V
Sbjct: 768 VRELVDEAITAYRFNDAANGLYAYVWGKVCDWYLEFAKP-LLASDDAAVVAETRATMAWV 826

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           I Q  ILL   +P +  +++  +   D     Q    
Sbjct: 827 IDQCLILLHPIMPFITEELWGQIATRDTLLVHQDWPT 863



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 58/196 (29%), Gaps = 34/196 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D  G       +    
Sbjct: 39  TVMIPPPNVTGALHVGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQLQVEKMLA 98

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLDISYD---------------DFI 95
            T+                  +  Q      +    L  S D                  
Sbjct: 99  ATQQPSRRELGREAFLDKVWEWKGQYGGTIVEQLKRLGASCDWDRNAFTMAGADGDPRTG 158

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  +  KG IY+G     +    E   +D EV       +      
Sbjct: 159 HENSPNFHDAVIKVFLDMYQKGFIYRGKRLVNWDPHFETAISDLEVENIEVQGHMWHFKY 218

Query: 156 PVQWMEEEGYFFRLSA 171
           P+   E   Y  +   
Sbjct: 219 PLAGGETYTYVEKDED 234


>gi|77361341|ref|YP_340916.1| valine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|90101546|sp|Q3II73|SYV_PSEHT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76876252|emb|CAI87474.1| valine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 951

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 136/399 (34%), Gaps = 86/399 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R++   +      ++     +P +  N   S++   ++D  +SR+   W
Sbjct: 371 IEPLLTDQWYVRVAPLAEPAKEAVKNGDIQFVPKQYENMYFSWMND-VQDWCISRQ-LWW 428

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDSEGNVFVGRDEAEVRRENNIADSVTLSQDEDVLDTWFSSALWTFSTQGWPA 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P+D+ V G DI+ F         L           +P      +      
Sbjct: 489 NTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTLHFIKDENGKPQVPFKTVYVTGLIRDD 547

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 548 NGDKMSKSKGNVLDPLDMIDGIELEELVQKRTGNMMQPKLAAKIEKDTRKVFAGGIEAHG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D + L+     +  N + N  SR V M  ++ D    T  
Sbjct: 608 TDALRFTLAAMASTGRDINWDMNRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFATDA 664

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
               + +D  IL      ++   E++ N     A   +         D Y +  KP  L 
Sbjct: 665 QKELSLADRWILGQFESTVKSYTEHLDNYRFDLAANTLYEFTWHQFCDWYLELTKP-VLF 723

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           K N  +        + V+  L  L+   +P +   I+  
Sbjct: 724 KGNEAQQRGTRNTLITVLESLLRLMHPMMPYITETIWQR 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 21/167 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L RF R+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTDHAGIATQMLVERKLHAE 95

Query: 70  ----------KVFVDQNSRNFRDMAD---------VLDISYDDFIRTTEKRHHDTCRILW 110
                     + F+++     ++               + +D    T +    +  + ++
Sbjct: 96  EGKTRHDLGREDFINKIWEWKKESGGTITKQLRRLGASVDWDRERFTMDDGLSEAVKEVF 155

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  +  IY+G     +  +     +D EV       +      P+
Sbjct: 156 VRLHKENLIYRGKRLVNWDPKLHTAISDLEVENKDKQGHMWNLRYPL 202


>gi|57641209|ref|YP_183687.1| valyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74504649|sp|Q5JGN7|SYV_PYRKO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57159533|dbj|BAD85463.1| valyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 888

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 16/262 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y  +  +
Sbjct: 451 VLDCWVDSSITPLIITKWHEAIKGDEEGKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTW 510

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    + +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 511 VLTGEKPWHDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALA-PPGED 569

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     L+++D     P      D  ILS   R++
Sbjct: 570 HPFKWETVD--YNYRFLQKVWN-IYRFAERHLENFDPA-SAPEELEPLDRWILSRLHRLI 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E M+    +    ++I+ V     D Y +  K + L   + +          E++ 
Sbjct: 626 KFATEEMEKYRFNLLTRELITFVWHEVADDYIEMIK-YRLYGDDEESKLKAKAALYELLY 684

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +++  LF
Sbjct: 685 NVMLLLAPFVPHITEELYQNLF 706



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  EKKPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMTGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNA-----------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +                   +  Q     R+    +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGISKDQPEKFLQKCIEWTWQAIEAMRNQFIRIGYSADWDLEYHTMDDWYKAAVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +   KG +Y+  +  ++  R        EV  
Sbjct: 151 SLIEFYKKGMLYQAEHPVYWCPRCRTSLAKAEVGY 185


>gi|298506245|gb|ADI84968.1| leucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 824

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA
Sbjct: 31  SKPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N    R     + +SYD    + T +  ++   + ++ ++ +KG +Y
Sbjct: 91  IKHGSHPAKWTYENIDYMRSQLKKMGLSYDWGRELATCDVDYYKWEQKMFLEMYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    E    +++V  G          + V   E + +FFR++ Y ++LL   
Sbjct: 151 KKSSFVNWCPACETVLANEQVEDG----CCWRCDSDVTQKELDQWFFRITRYAEELLEDT 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
            + P +   +            G
Sbjct: 207 WNLPGWPERVLVMQRNWIGKSFG 229



 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 28/279 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D              Y          D ++A +W P D ++ G +    H +Y   F  +
Sbjct: 494 DTMDTFVQSSWYFLRYCCPDFACGPIDRARAGYWMPVDQYIGGIEHAVLHLLYSRFFTKA 553

Query: 282 AN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                        K + + G ++  G K+SKS GNV+DP  +IE  G D  R F +    
Sbjct: 554 LRDLGYVTVAEPFKNLLTQGMVIKDGAKMSKSKGNVVDPDALIERYGADTARLFTLFAAP 613

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +   G++        N +  LV   +  I        P P A  +    +    
Sbjct: 614 PEKDLDWSDQGVEGSFR--FLNRVWRLVFEVLPFIGS---AGKPDPAALGDGARDLRRTV 668

Query: 395 SRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++++ +++ +    + A++ V+ LV+       + +P    K  P+ A     V  E
Sbjct: 669 HKTIRKVTDDLDERFHFNTAISAVMELVNA----IQSFEP----KNAPENA----PVLRE 716

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLD 490
            +  +  LL  FVP +A ++++ L      E   + S D
Sbjct: 717 AVESVVQLLAPFVPHVAEELWESLGHQGGVEASGWPSYD 755


>gi|182678696|ref|YP_001832842.1| valyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634579|gb|ACB95353.1| valyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 912

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 121/346 (34%), Gaps = 29/346 (8%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E  +F             +      +P     +   FV++   +  L+            
Sbjct: 413 EKTYFEWLDNIQPWCISRQLWWGHQIPAWYGPDGHVFVEASATEAELAALAHYGTPTSLI 472

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W  +     +T G+ D     K +++P ++ V G DI+ F    +       
Sbjct: 473 RDEDVLDTWFSSALWPFSTLGWPDETAELK-RYYPTNVLVTGFDIIFFWVARMMMMGLHF 531

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P             KG K+SK+ GNVIDP+ ++++ G DALR+ L    A G+D  
Sbjct: 532 LGEVPFRDVYIHALVRDEKGAKMSKTKGNVIDPLNLVDQYGADALRFTLASMAAPGRDIK 591

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSV--SMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                ++     +    + N    +     +LK D+D   P   + T  ++ I++  +  
Sbjct: 592 LSTQRVEG--YRNFVTKLWNAARFAEVNRCVLKPDFD---PRKVSLT-LNQWIVAEAANT 645

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT---------NPDRAST 446
           ++ I   ++      A       V     D Y +  KP               +      
Sbjct: 646 IESITTAIEIYRFDDAANAAYRFVWNIFCDWYLELAKPLLQTNDAGSTENLVPDVAGGDE 705

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIF------DILFVADENRCF 486
                  ++  +  LL  F+P +  ++F       +L VA+  R  
Sbjct: 706 TRATVAFILDLIVKLLHPFMPYVTEELFSFAHQGQVLAVAEWPRLL 751



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 23/158 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA    + D+L RF R+ G DVL+  G D  G       + 
Sbjct: 36  PTFCIVIPPPNVTGTLHMGHALNNTLQDILCRFERMRGKDVLWQPGMDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             +  +                +  +           + +    D S + F  T ++   
Sbjct: 96  RLMEHQEPDRRTLGRQKFLEKVWAWKEESGGAIISQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                ++ ++  +G IYK      +    +   +D EV
Sbjct: 154 RAVIKVFVRLYKEGLIYKDKRLVNWHPGLQTAISDLEV 191


>gi|109947830|ref|YP_665058.1| valyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109715051|emb|CAK00059.1| valS [Helicobacter acinonychis str. Sheeba]
          Length = 872

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KECTLLEKIEEHVHQVGHCYRCHNVVEPYVSKQW-FVKPEIAHNSIEKIQQGLVQFYPPN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFASLDTPLNCPTCKSGKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L      G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCTTGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAVSY-LKLKQESFKDKERLKAYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKGKRFCLMMPPPNVTGVLHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  ---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREEFIKRVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDG 186


>gi|325925505|ref|ZP_08186896.1| valyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544097|gb|EGD15489.1| valyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 973

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 137/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 401 IEPYLTDQWFVKMDALAKRGLELVESGQIKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 458

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 459 GHRIPAWFDEAGKCYVGHDEAQVRAKHGLGAEIALHQDSDVLETWFSSQLWPFSTLGWPD 518

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 519 AQAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 578

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 579 KMSKSKGNVLDPLDIIDGISIEDLVAKRTHGLMQPRMAEKIEKATRKEFPDGIIAHGADA 638

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 639 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 692

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +   E   +  N         +         D + +  KP  L   +
Sbjct: 693 RTEAEKWILARLDKATAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNNQD 751

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       QS  Q
Sbjct: 752 ADAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPRLGITTATISLQSFPQ 806



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGQTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|317047302|ref|YP_004114950.1| leucyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948919|gb|ADU68394.1| leucyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 860

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N +  ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIQYMKNQLKLLGFGYDWSRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFVKITDYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  ++   ++           G
Sbjct: 206 LDTLEDWPEQVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 101/310 (32%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D + A +W P D +V G +    H +Y+  +                  
Sbjct: 503 YTCANYNEGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFYHKLLRDAGLVNSNEPAKR 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V  +     KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGANGERNWVSPVDVNVERDEKGRIVKAIDNQGREVVYAGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQLMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
               +     +     A  +  +++     + + ++ +++  +   + A+A ++ L   +
Sbjct: 677 AYDHVAKGATVALDVNALNDDQKALRRDLHKTIAKVADDIGRRQTFNTAIAAIMEL---M 733

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
           ++    + P   +++  DRA     +  E +  +  LL  F P  +  +++ L      +
Sbjct: 734 NKLI--RAP---QESEQDRA-----LLQEALVAVTRLLYPFTPHTSYALWEALGGEGNID 783

Query: 483 NRCFQSLDQR 492
           +  +   D+ 
Sbjct: 784 DASWPVADEA 793


>gi|284929199|ref|YP_003421721.1| valyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809643|gb|ADB95340.1| valyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 908

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 134/376 (35%), Gaps = 59/376 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F ++     K L + +         +R  +V       LKD  +SR+   
Sbjct: 355 PIEPLLSTQWFVKIEPLSKKALKFLDEDNSPRFIPQRWTKVYRDWLVKLKDWCISRQ-LW 413

Query: 216 WG------------------------------------------IKIPDDPQYIMYVWID 233
           WG                                          I++  DP  ++  W  
Sbjct: 414 WGHQIPAWYVISQTDGLITDDTPFIVAYDESEALEKARKEYGNDIQLKQDPD-VLDTWFS 472

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +T G+ +N +   A ++P    V G DI+ F    +   A   +  +P      
Sbjct: 473 SGLWPFSTLGWPENTE-DFATYYPTSTLVTGFDIIFFWVARMTMMAGYFTDQMPFKDVYI 531

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA------CGKDGFYDKDG 345
                   G+K+SKS  N IDP+ +I++ G DALRY L++E+A        +      + 
Sbjct: 532 HGLVRDENGKKMSKSSNNGIDPLILIDKYGTDALRYTLIKEVAGAGQDVTLQYNRKTNES 591

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
                + + AN + N     +  + ++   D           +D  ILS   +V ++   
Sbjct: 592 ESVEASRNFANKLWNAARFVIMNLKEEIRDDIGNLNTEYLDLADYWILSRFQKVTKQTIN 651

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++ +  +  A   +   +     D Y +  K    + T+    +        ++  +  L
Sbjct: 652 HIDSYGLGEAAKGLYDFIWSDFCDSYIELVKSRLSENTDSSLGA--QQTLAYILDGILKL 709

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  L
Sbjct: 710 LHPFMPHITEEIWQTL 725



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 23/150 (15%)

Query: 2   KEREKLYIST-AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-- 58
            ++EK++             H+GHA+E  + DVL R+HR+ G + L   GTD     +  
Sbjct: 36  TKKEKIFCMVIPPPNVTGSLHMGHAFEDCLMDVLVRYHRMSGKNTLCLPGTDHASIAVHS 95

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMAD----------------VLDISYDDFIRTTEK 100
              K  +    T      +N                           D S + F  T ++
Sbjct: 96  ILDKQLKEEDKTRYEIGRENFLKRAWEWKQSSGGKIVSQLKQVGLSADWSRERF--TLDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
                 +  + K+ +   IY+G Y   +  
Sbjct: 154 GLSKAVKTAFIKLYEAELIYRGKYLINWCP 183


>gi|39997307|ref|NP_953258.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|60390724|sp|Q74AZ0|SYL_GEOSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39984198|gb|AAR35585.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 824

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA
Sbjct: 31  SKPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N    R     + +SYD    + T +  ++   + ++ ++ +KG +Y
Sbjct: 91  IKHGSHPAKWTYENIDYMRSQLKKMGLSYDWGRELATCDVDYYKWEQKMFLEMYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    E    +++V  G          + V   E + +FFR++ Y ++LL   
Sbjct: 151 KKSSFVNWCPACETVLANEQVEDG----CCWRCDSDVTQKELDQWFFRITRYAEELLEDT 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
            + P +   +            G
Sbjct: 207 WNLPGWPERVLVMQRNWIGKSFG 229



 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 28/279 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D              Y          D ++A +W P D ++ G +    H +Y   F  +
Sbjct: 494 DTMDTFVQSSWYFLRYCCPDFACGPIDRARAGYWMPVDQYIGGIEHAVLHLLYSRFFTKA 553

Query: 282 AN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                        K + + G ++  G K+SKS GNV+DP  +IE  G D  R F +    
Sbjct: 554 LRDLGYVTVAEPFKNLLTQGMVIKDGAKMSKSKGNVVDPDALIERYGADTARLFTLFAAP 613

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +   G++        N +  LV   +  I        P P A  +    +    
Sbjct: 614 PEKDLDWSDQGVEGSFR--FLNRVWRLVFEVLPFIGS---AGKPDPAALGDGARDLRRTV 668

Query: 395 SRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++++ +++ +    + A++ V+ LV+       + +P    K  P+ A     V  E
Sbjct: 669 HKTIRKVTDDLDERFHFNTAISAVMELVNA----IQSFEP----KNAPENA----PVLRE 716

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLD 490
            +  +  LL  FVP +A ++++ L      E   + S D
Sbjct: 717 AVESVVQLLAPFVPHVAEELWESLGHQGGVEASGWPSYD 755


>gi|88860574|ref|ZP_01135212.1| leucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817772|gb|EAR27589.1| leucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 862

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 91/238 (38%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  SKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     L   Y  D  I T    ++   +  + K+ +KG +Y
Sbjct: 91  IKNHTAPAKWTYENIDYMRTQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y  +LL   
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL---KDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +    +   ++           GL      + + +TF      PD    + YV + A 
Sbjct: 207 DKLEHWPEQVKTMQRNWIGRSEGLEVEFKRADNDETFRVYTTRPDTIMGVTYVAVAAG 264



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 78/195 (40%), Gaps = 27/195 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  VIE+ G D +R F++      +   +   G++         G   
Sbjct: 621 SKMSKSKNNGIDPQSVIEQYGADTVRLFMMFTAPPEQTLEWSDSGVE---------GAHR 671

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
            V R        K          A     +++     + + ++ +++  +   + A+A V
Sbjct: 672 FVKRVWKYAYDVKQAGFASLDVSALNNEQKALRRELHKAIAKVSDDLDRRQTFNTAIAAV 731

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++++ R           +T  D+A     +  E +  L I+L   +P + ++++  L
Sbjct: 732 MELLNKLTR--------ASLETEQDKA-----IAHEALNALIIMLSPIIPHVCHQLWHEL 778

Query: 478 FVADE--NRCFQSLD 490
               +  N  + + D
Sbjct: 779 GKEGDVINATWPTFD 793


>gi|326622392|gb|EGE28737.1| Aminoacyl-tRNA synthetase, class Ia [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 941

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 111 ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 170

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 171 AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 230

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 231 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 286

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 287 LDKLDHWPDTVKTMQRNWIGRSEG 310



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 571 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 630

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 631 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 690

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 691 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 746

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 747 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 804

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 805 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 851

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 852 TLWQELGGEGDIDNAPWPVADEQ 874


>gi|253582992|ref|ZP_04860210.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251835198|gb|EES63741.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 1062

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 71/500 (14%), Positives = 162/500 (32%), Gaps = 28/500 (5%)

Query: 3   EREKLYISTAIAYP----NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           +++  Y++              HI  A+    A+V  ++      D+ F    D  G+  
Sbjct: 318 DKKCWYVTCDTYVTLSDGTGVVHIAPAFGEDDANVGRKY------DLPFVQLVDSKGEMT 371

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                   +   VF  +  ++     +   + +D  +      H   C       + +  
Sbjct: 372 E-----ETLWPGVFCKKADKDILKNLEQNGLLFDAPLFEHNYPHCWRCDTPLIYYARESW 426

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKL 176
             K        +R+    N      G  G++ +   N   W      ++      ++ + 
Sbjct: 427 FIKMTAVKEDLIRNNNTINWIPKTIG-KGRFGDWLENVQDWGISRNRYWGTPLNVWECEC 485

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
              +       L     N   +         +++      G ++   P+ ++  W D+ +
Sbjct: 486 GHNHAIGSIEELKTMSPNCPENIELHRPYIDAVTITCPHCGKQMTRVPE-VIDCWFDSGS 544

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHG 294
                  Y         K +PAD      D     F+++   + L+    P    +    
Sbjct: 545 MPFAQHHYPFENKDLFEKQFPADFISEAVDQTRGWFYSLLAISTLIFNKAPYKNVIVLGH 604

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G+K+SKS GN +DP E +   G DA+R++     A      +    +++     +
Sbjct: 605 VQDENGQKMSKSKGNAVDPFEALATYGADAIRWYFYINSAPWLPNRFHGKAVQEGQRKFM 664

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           +          +   +  +D           T  D  +LS  + V++ + EN+ +  +  
Sbjct: 665 STLWNTYAFFVLYAEIDQFDATKYTLDKEKLTVMDRWLLSKLNTVVKGVDENLADYKLLE 724

Query: 413 ALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           A   +   V E+ + Y     ++ W    T+     T        +  ++      +P +
Sbjct: 725 AARLLQDFVDELSNWYVRRSRERFWVQDMTDDKI--TAYMTLYTALVTISKAAAPMIPFM 782

Query: 470 ANKIFDILFVADENRCFQSL 489
             +I+  L  + +    +S+
Sbjct: 783 TEEIYRNLVCSIDKNAPESI 802



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G DV    G D HG  +   
Sbjct: 60  KGDKTYTFYDGPPTANGKPHIGHVLTRVIKDMVPRYRTMKGYDVPRKAGWDTHGLPVELE 119

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRH 102
            +                       K  V +    + D +  +    D      T +   
Sbjct: 120 VEKLLGINGKDQIESYGLQPFIEECKTSVWKYKGMWEDFSKTVGFWADMEKPYVTYDNNF 179

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +K  +YKG     Y  R     +  EV +G  
Sbjct: 180 IESEWWALKQIWEKELLYKGFKIVPYCPRCGTPLSSHEVAQGYK 223


>gi|157368805|ref|YP_001476794.1| valyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|157320569|gb|ABV39666.1| valyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 958

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 381 IEPMLTDQWYVRTAPLAKVAVEAVEQGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 438

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 439 GHRIPAWYDVNGKVYVGRNEAEVRSENNLGPDVVLNQDEDVLDTWFSSGLWTFSTLGWPE 498

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 499 QTDALKTFH-PTSVMVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 557

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 558 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 617

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 618 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNAEGQDCGFNGGE 674

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE +       A   +         D Y +  KP     
Sbjct: 675 KVLSLADRWILAEFNRTVKAYREALDTYRFDLAANILYEFTWNQFCDWYLELTKPVVTNG 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  ++  T  +  + V+  L  L    +P +   I+  
Sbjct: 735 SEAEQRGT-RHTLITVLEALLRLAHPVIPFITETIWQR 771



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 37  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 96

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +                           +R  R + + +D   + F  T ++
Sbjct: 97  VERKIAAEENKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  R ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 155 GLSNAVREVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 211


>gi|18976662|ref|NP_578019.1| valyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|74537331|sp|Q8U409|SYV_PYRFU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18892235|gb|AAL80414.1| valyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 891

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y  +  +
Sbjct: 453 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 MLTGEKPWNDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTALA-PPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D  ILS   R++
Sbjct: 572 HPFKWEIVD--YNFRFLQKLWN-IYRFAERHIKDFDYEKYKHIELEPLDRWILSRLHRII 628

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++++ +     D Y +  K   L   + +          E++ 
Sbjct: 629 KFATEELEKYRFNLITRELMTFIWHEVADDYIEMIKH-RLYGEDEESKLKAKVALYELLY 687

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +++  +F
Sbjct: 688 NIMLLLAPFVPHITEELYHHIF 709



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 13/168 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG       
Sbjct: 32  DKPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELKV 91

Query: 63  QNA-----------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
           +                   +  Q     R     +  S  +D    T +  +    +  
Sbjct: 92  EKEFGISKDQPEEFLKKCIEWTWQAIEKMRAQFIRIGYSADWDLEYHTMDDWYKAAVQKS 151

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 KG IY+  +  ++  R        EV    +  Y      P+
Sbjct: 152 LLDFYKKGLIYREEHPVYWCPRCRTSLAKAEVGYVEEEGYLYYIKLPL 199


>gi|224534475|ref|ZP_03675051.1| valine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514152|gb|EEF84470.1| valine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 875

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 159/414 (38%), Gaps = 48/414 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + + +    + ++ +  K   +K          ++ +    + ++   G  Y +  
Sbjct: 295 ILTQDGKLNKNVPVQYQGLRMKDARFKIEIELM----EKGFLQGVKKHRQQVGHCYRSGE 350

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             V+      +F R+    DK L   E+      P +  N    +  S ++D  +SR+  
Sbjct: 351 -VVEPYLSTQWFVRMKPLADKALKALENGELRFYPKKWENT-YKYWLSNIRDWCISRQLV 408

Query: 215 DWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
            WG +IP                              DP  ++  W  +     ++ G+ 
Sbjct: 409 -WGHRIPAWYNIDTAELVISDTDPSLDEKNIGKRFVQDPD-VLDTWFSSWLWPFSSLGWP 466

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           ++       ++P +  +   DI+ F    +       +  +P      +      +GEK+
Sbjct: 467 NDTS-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQIPFKDVYITPLLRDKQGEKM 525

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+++I E G D+LR+ L      G+D   D       + A  AN + N  S
Sbjct: 526 SKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDFKDFM--LGAKFANKVFN-AS 582

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           + + + LK+ + +      F + D+ +L+  +  +  +  +  N   + A   V      
Sbjct: 583 KFILLNLKNREIL--NDLEFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWN 640

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  K  +L   + +  +  +   +  +++  ++L  F+P +  KI+ 
Sbjct: 641 DFCDWYIEISK-IDLNSEDVNIQNMAISKLLFFLKKALVILHPFIPFVTEKIYS 693



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           EK  +           H+GHA   ++ D+L R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFER 95

Query: 64  --------NAGVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          D    L  SYD      T ++      
Sbjct: 96  HLKNIGKSKNDFEREELVQEIFKLKDKHRGVIVDQIKKLGASYDHSRERFTLDEGLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|147673619|ref|YP_001216429.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|146315502|gb|ABQ20041.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012773|gb|ACP08983.1| leucyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 894

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 67  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 127 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 187 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 243 DNLDGWPEMVKTMQRNWIGRSEG 265



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 529 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFYKLLRDAGY 588

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 589 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 648

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 649 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 702

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 703 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 762

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 763 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 809

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 810 ALGQSNIDTASWPTYDEA 827


>gi|78188501|ref|YP_378839.1| isoleucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170700|gb|ABB27796.1| Isoleucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 1083

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 11/270 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G +    P+ ++ VW D+ +       Y           +PAD    G D  R       
Sbjct: 540 GRRFNRTPE-LIDVWFDSGSMPFAQLHYPFENRELFDTMFPADFIAEGVDQTRGWFYTLH 598

Query: 277 AF-LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           A   L  + P  K +  +  IL K G K+SKS GNV+DP E++E  G DALR++L+   A
Sbjct: 599 AIATLLFDKPAYKNLIVNAHILDKNGHKMSKSKGNVVDPFEMMERYGADALRWYLMVSSA 658

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILS 392
             K   ++ D +++         + +     +   +  +    P       +E D  +LS
Sbjct: 659 PWKPKSFNTDEIEEEQRRFFRALVNSYNFFVLYANVDGFTFAEPSIAVAERSELDRWVLS 718

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVL 448
             + ++ E+ + M+   I  AL  +         + Y     ++ W+     PD+ +   
Sbjct: 719 CLNTLVDEVHQRMEQYDITAALRLINDFTVDDLSNWYIRRSRKRFWK-SDMGPDKIAA-Y 776

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               E +  L  LL    P +A +++  L 
Sbjct: 777 QTLYETLMTLCKLLAPITPFIAERLYLNLN 806



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--------- 63
               N +P + H +   I DV+ R+  + G  V    G D HG  +  A +         
Sbjct: 51  PPTVNGKPGVHHLFSRTIKDVICRYKTMQGYRVPRKAGWDTHGLPVEIAVEKKLGLKNRS 110

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
                        A       ++ N   +  + + +   +  D    T    + ++    
Sbjct: 111 QVVDYGDGEFNAEARALVYHHIEDNREGWGKLTERMGYWVDMDKPYITCTNNYIESVWWA 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 171 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 207


>gi|121591023|ref|ZP_01678340.1| leucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121547133|gb|EAX57265.1| leucyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 894

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 67  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 127 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 187 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 243 DNLDGWPEMVKTMQRNWIGRSEG 265



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 529 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 588

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 589 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 648

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 649 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 702

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 703 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 762

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 763 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 809

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 810 ALGQSNIDTASWPTYDEA 827


>gi|15640972|ref|NP_230603.1| leucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153823306|ref|ZP_01975973.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081130|ref|YP_002809681.1| leucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254285626|ref|ZP_04960590.1| leucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254848087|ref|ZP_05237437.1| leucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297581335|ref|ZP_06943259.1| leucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298498928|ref|ZP_07008735.1| leucyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655415|gb|AAF94118.1| leucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126519170|gb|EAZ76393.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|150424488|gb|EDN16425.1| leucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227009018|gb|ACP05230.1| leucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254843792|gb|EET22206.1| leucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297534651|gb|EFH73488.1| leucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297543261|gb|EFH79311.1| leucyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 894

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 67  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 127 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 187 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 243 DNLDGWPEMVKTMQRNWIGRSEG 265



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 529 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 588

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 589 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 648

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 649 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 702

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 703 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 762

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 763 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 809

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 810 ALGQSNIDTASWPTYDEA 827


>gi|332035428|gb|EGI71927.1| valyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 951

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 136/399 (34%), Gaps = 86/399 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R++   +      ++     +P +  N   S++   ++D  +SR+   W
Sbjct: 371 IEPLLTDQWYVRVAPLAEPAKDAVKNGDIQFVPKQYENMYFSWMND-VQDWCISRQ-LWW 428

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDSEGNVFVGRDEAEVRRENNIADNVTLSQDEDVLDTWFSSALWTFSTQGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P+D+ V G DI+ F         L           +P      +      
Sbjct: 489 NTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTLHFVKDENGKPQVPFKTVYVTGLIRDD 547

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 548 NGDKMSKSKGNVLDPLDMIDGIELEDLVQKRTGNMMQPKLAAKIEKDTRKVFAGGIEAHG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D + L+     +  N + N  SR V M  ++ D       
Sbjct: 608 TDALRFTLAAMASTGRDINWDMNRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFANDA 664

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D  IL      ++   E++ N     A   +         D Y +  KP  L 
Sbjct: 665 QKELSLADRWILGQFESTVKTYTEHLDNYRFDLAANTLYEFTWNQFCDWYLELTKP-VLF 723

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           K N  +        + V+  L  L+   +P +   I+  
Sbjct: 724 KGNEAQQRGTRNTLITVLESLLRLMHPMMPYITETIWQR 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 21/167 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L RF R+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTDHAGIATQMLVERKLHAE 95

Query: 70  ----------KVFVDQNSRNFRDMAD---------VLDISYDDFIRTTEKRHHDTCRILW 110
                     + F+++     ++               + +D    T +    +  + ++
Sbjct: 96  EGKTRHDLGREDFINKIWEWKKESGGTITKQLRRLGASVDWDRERFTMDDGLSEAVKEVF 155

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  +  IY+G     +  +     +D EV       +      P+
Sbjct: 156 VRLHKENLIYRGKRLVNWDPKLHTAISDLEVENKDKQGHMWNLRYPL 202


>gi|330994254|ref|ZP_08318182.1| Valyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758721|gb|EGG75237.1| Valyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 898

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 123/362 (33%), Gaps = 43/362 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      ++          +   ES     +P +  N   ++++  ++   +SR+   W
Sbjct: 369 VEPRLTTQWYCDAKTLAGPAIEAVESGQIEFVPRQWENTFYAWMRD-IQPWCISRQ-LWW 426

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 427 GHRIPAWYGPDGHVFVAHDEADATAQARSHYGQDTALTRDEDVLDTWFSSALWPFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      A+++P D+ V G DI+ F    +         ++P  K          +G+K
Sbjct: 487 PERTA-DLARYYPTDVLVTGFDIIFFWVARMMMMGLHFMKDVPFRKVFIHGLVRDERGQK 545

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN IDP+E+I+  G DA R+ +      G+D    +  +++         I N  
Sbjct: 546 MSKSKGNGIDPLEMIDTYGADATRFCICALTGLGRDVKLGRKRVEE--YRSFMTKIWNAA 603

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                  +   +G  P     +     IL+  ++ +++  + +++       A     V 
Sbjct: 604 RFCEMNGVAPVEGFSPA-SVRSPLGRWILAELAQAVEDATKALESFRFDEYAATCYRFVW 662

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D + +  KP          A     V   V+  +  L+Q   P + + ++      
Sbjct: 663 NCFCDWFLEFAKP-VFGAGETAEAVETRAVAAHVLGTILRLMQPVTPFMTDTLWQHFGFG 721

Query: 481 DE 482
            E
Sbjct: 722 AE 723



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 54/169 (31%), Gaps = 20/169 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     HIGHA  M + D L R+ R+ G DVL+  GTD  G       +    
Sbjct: 38  TIMIPPPNVTGTLHIGHALTMTLQDTLIRWRRMQGRDVLWQPGTDHAGIATQLVVERMLQ 97

Query: 68  TT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
                               +  ++          L  S D      T +    D  + +
Sbjct: 98  KEGTSRQEMGRDAFVERVWEWKAESGGGITKQLRRLGSSLDWKRERFTMDDGLSDAVKEV 157

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +  +  +G IY+      +     +  +D EV              PV+
Sbjct: 158 FVTLYREGLIYRDRRLVNWDPAFRSAISDLEVDNRETRGSLWYIRYPVE 206


>gi|193213365|ref|YP_001999318.1| isoleucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086842|gb|ACF12118.1| isoleucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 1080

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 166/436 (38%), Gaps = 23/436 (5%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD---FIRTTE--KRHHDTCR 107
           E  + I +  +  G   +    Q++  F    DV  I Y     +IRTT+   R  +  +
Sbjct: 374 EADKPIMQRLKEEGKLYRRETIQHTYPFSWRYDVPVIYYARESWYIRTTDIAPRMVELNK 433

Query: 108 IL-WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
            + W         +     G +   ++ +    E + G     + A+   +    + G  
Sbjct: 434 TINWNPSEIGAGRF-----GNWLEENKDWALSRERFWGTPLPVWVAEDFAIGDGPDSGKL 488

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F + +  +    + +   + +   +  ++ +  V+  L    + R  F    K  +    
Sbjct: 489 FAVGSVAELREGFIDIDGQQMNLGDALDKGL--VELDLHKPFVDRIWFVRDGKRFNRTPE 546

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+ +       Y         K +PAD    G D     F+ ++  A L+    
Sbjct: 547 LIDVWFDSGSMPFAQLHYPFENKELFDKTFPADFIAEGVDQTRGWFYTLHAIATLIFDRP 606

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                V +   +  KG+K+SKS GNV+DP E +E+ G DA+R++L+      +   ++  
Sbjct: 607 AYRNLVVNGHILDKKGQKMSKSKGNVVDPFESMEQYGADAIRWYLMITSPPWRPKLFNVA 666

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIR 402
            +++         I +     +   +  +     T      +E D  +LS  + ++ E+ 
Sbjct: 667 EIEEEQRKFFRAFINSYNFFVLYANVDGFRNEEATIPFAERSELDRWVLSSLNTLVAEVT 726

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             M++  +  A   +         + Y     ++ W+  +  PD+ S        V+  L
Sbjct: 727 RRMESYDLTGASRLIGDFTVDDLSNWYIRRSRKRFWK-GEMGPDKLSA-YQTLATVLETL 784

Query: 459 AILLQAFVPKLANKIF 474
           + L+  F P +A KI+
Sbjct: 785 SKLMAPFAPFIAEKIW 800



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-----NAGV 67
               N +P + H +   I DV+ R+H + G  V    G D HG  +  + +         
Sbjct: 50  PPTVNGKPGVHHLFSRTIKDVVCRYHAMQGYQVPRKAGWDTHGLPVEISVEKKLGLKNKS 109

Query: 68  TTKVF----------------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
             + +                +D N   +  + + +   +  D    T +  + ++    
Sbjct: 110 HVEEYGVGEFNREARSLVYHHIDDNREGWGKLTERMGYWVDMDSPYITCDNNYIESVWWA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 170 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 206


>gi|296284593|ref|ZP_06862591.1| valyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 922

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 124/356 (34%), Gaps = 43/356 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++        K +    S    I+P        ++++  ++   +SR+   W
Sbjct: 390 IEPWLTDQWYVDAEKLAVKPIEAVRSGEVEIVPKTWEKTFFNWME-NIQPWCVSRQ-LWW 447

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                                 ++  W  +      T G+ +  
Sbjct: 448 GHRIPAWYADDGRVIVAEDADAAQSLAGPGVSLVQDDDVLDTWFSSALWPFATLGWPEKT 507

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D    K +P  L + G DIL F    +    +  +   P  K           G K+SKS
Sbjct: 508 D-LLEKHYPNSLLISGFDILFFWDARMLMAGYFNTGQKPWEKLYLHGLVRAADGSKMSKS 566

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP+ +I++ G DALR+F+    + G+D   D+  ++     + A  + N V R  
Sbjct: 567 KGNVVDPLILIDQYGADALRFFMAAMESQGRDIKMDEKRVEG--YRNFATKLWNAV-RYC 623

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
                     I  P A    +  I+         I + + +     A   +   V +   
Sbjct: 624 QTNGIGASQSIAAPEARLAVNSWIIGEVIETKATIEKALADLRFDAAANAIYHFVWDRFC 683

Query: 425 DRYFDAQKPWELKKTNPDR----ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           D Y +  KP        D     A     V    I Q+ ++L  F+P +  +++  
Sbjct: 684 DWYLELIKP-VFAGDAADADSPPAQETRAVAGWAIDQILVMLHPFMPFVTEELWHA 738



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           + E   I           HIGHA +  + D++ R+ RL G D L+  G D  G       
Sbjct: 38  DAEPFTIVNPPPNVTGSLHIGHALDNTLQDIVVRYERLRGKDALWVVGMDHAGIATQMVV 97

Query: 60  ------KAAQNAGVTTKVFVDQNSRNFRD-------MADVLDISYD--DFIRTTEKRHHD 104
                 K  +    + + F+ +      +           L  S D      T ++    
Sbjct: 98  ERQLEAKQDKRTNYSREDFIQKVWEWKAESGGAITGQLRRLGCSMDWSREQFTMDEHFSK 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               ++  + + G IY+      +  + +   +D EV +      +     P++
Sbjct: 158 AVTKVFVDLYNDGLIYRDKRLVNWDPKLKTAISDLEVEQQTIAGSFWHFRYPLE 211


>gi|206900296|ref|YP_002251273.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739399|gb|ACI18457.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 824

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 85/205 (41%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y      YP+   H+GH     I DV+AR++ + G +VL   G D  GQ    A
Sbjct: 43  SDKPKYYTLVMFPYPSGDLHMGHMRNYTIGDVVARYYTMKGYNVLNPMGWDAFGQPAENA 102

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V  K +  +N    ++    + +   +D  +      ++   + ++ K+ ++G  
Sbjct: 103 AIKHKVHPKEWTYKNIARMKEQLFKMGVVYDWDREVTACAPDYYKWTQWIFLKLYERGLA 162

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G          +PV+  E E +FF+++ Y + LL  
Sbjct: 163 YRKKAPANWCPTCKTVLANEEVIDGK----CWRCKSPVERREFEQWFFKITEYAEDLLKD 218

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            ++   +   ++   +       GL
Sbjct: 219 LDTLEHWPEKVKLMQKNWIGKSEGL 243



 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 36/250 (14%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPK 288
           Y       +     KA++W P D +  G +    H +Y          A       P  K
Sbjct: 520 YTDPHNDKEPFSREKAEYWMPVDQYTGGIEHAVLHLLYSRFITKVLYDAGYSPVREPF-K 578

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++F+ G +   G+ +SKSLGN++    ++E  G D  R F++       D  +  +G++ 
Sbjct: 579 RLFTQGMVYKDGQIMSKSLGNIVSVDYMVENYGADTARLFILFVAPPEVDIEWSDEGVE- 637

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                   G    ++R   ++L D +     P    E ++ I     + ++++ E+++N 
Sbjct: 638 --------GANRFLNRFWRLVLDDAEV---EPKVDEEQEKLIRRKLHKTIKKVTEDIENF 686

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A ++ L    +  FD        K N  R         E I+   +LL  FVP 
Sbjct: 687 KFNTAIAAIMEL---TNLLFDH-------KRNFGR----TPAFEEAIKTSILLLSPFVPH 732

Query: 469 LANKIFDILF 478
           +  +++  L 
Sbjct: 733 ITEELWSELG 742


>gi|226943293|ref|YP_002798366.1| valyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226718220|gb|ACO77391.1| valyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 944

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 128/396 (32%), Gaps = 79/396 (19%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +K ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEKAIAAVEDGSIQFVPRQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                             + ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDEAGNAYVGRDEAEVRSKYAIRNDEPLRQDEDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
               +  K    P D+ V G DI+ F    +   +  L+  +P             +G K
Sbjct: 487 PQQTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLSLHLTGQIPFRTVYVHGLVRDSQGHK 545

Query: 303 ISKSLGNVIDPIEVIE-------------------------------------EVGVDAL 325
           +SKS GNV+DP+++++                                       G DAL
Sbjct: 546 MSKSKGNVLDPLDIVDGIDLESLVTKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDAL 605

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+      + G+D  +D   ++     +  N + N  +           G    P   + 
Sbjct: 606 RFTFCSLASTGRDIKFDMGRVEG--YRNFCNKLWNAANFVFENTEGKDCGAADEPVELSP 663

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-- 441
            D  I+S   R  QE+   +       A   +   + +     Y +  KP  L       
Sbjct: 664 VDRWIVSALQRTEQEVTRQLDAFRFDLAAQALYEFIWDQYCAWYLELVKP-VLWDETASV 722

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +R        V V+     L   F+P ++ +I+  L
Sbjct: 723 ERQRGTRRTLVRVLETALRLAHPFMPFISEEIWQRL 758



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---- 60
           E   I           H+GH +   I D L RF R+ G + L+  GTD  G         
Sbjct: 31  EPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMVVER 90

Query: 61  ----------AAQNAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                     A        KV+  +       +R  R +   +D S + F  T ++   +
Sbjct: 91  QLAALGLDRHALGREKFLDKVWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDEGLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 149 AVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|254564061|ref|YP_003071156.1| valine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254271339|emb|CAX27351.1| valine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 949

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 72/382 (18%), Positives = 136/382 (35%), Gaps = 27/382 (7%)

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-------EEGYFFRLSAYQDKLLSY 179
            +    E +    +++ G     +  +   V+          E  +F  +S  +   ++ 
Sbjct: 413 QWLENIEPWCVSRQLWWGHQIPVWYGRKKDVEGRSGARTLPFEVTWFCAMSEAEAIAMAK 472

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                   + +         +     DL           +I  DP  ++  W  +     
Sbjct: 473 SYYGDGNQVVVVPEPPAYKRLDPENYDLR----NESGPYEIWRDPD-VLDTWFSSALWPF 527

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+ D      A+F+P +  V GKDI+ F    +      L+   P            
Sbjct: 528 STLGWPDKTP-ELARFYPTNTLVTGKDIIFFWVARMMMMGLHLTDQAPFETVYLHTLVRD 586

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG K+SKS GNV+DP+++I+  G DALR+ L    A G+D       ++     + A  
Sbjct: 587 EKGAKMSKSKGNVVDPVDLIDRFGADALRFTLAALAAPGRDIKLGPQRVEG--YRNFATK 644

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N  +R   M   +              +   L+  ++ + E+ + +     + A A  
Sbjct: 645 LWN-AARFAEMNGCELKADFRPEAVRETLNAWALTEAAKAVAEVAQGITVYRFNDAAAAA 703

Query: 418 ISLVS--EVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              V     D Y +  KP  L+    +P   +        +I Q+A LL  F+P L  ++
Sbjct: 704 YRFVWNVFCDWYLELAKP-VLQGEGVDPAARAETQATVAFLIDQIAKLLHPFMPFLTEEL 762

Query: 474 F----DILFVADENRCFQSLDQ 491
           +     +L         +S  +
Sbjct: 763 WAIKGQVLPTPRGLLALESWPE 784



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    I D+L RF R+ G DVL+  GTD  G       + 
Sbjct: 36  EPFSIVIPPPNVTGSLHMGHALNNTIQDILVRFERMRGKDVLWQPGTDHAGIATQMVVER 95

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
             +  +                +  +           + +    D S + F  T ++   
Sbjct: 96  KLMERQQPGRRELGREEFLRRVWAWKEESGGTIIGQLKRLGASCDWSRERF--TMDEGLS 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  +  +G IY+      +  + +   +D EV +     +      PV
Sbjct: 154 RAVLKTFVDLHAQGLIYRDKRLVNWDPKFQTAISDLEVQQIEVKGHLWHFDYPV 207


>gi|269798025|ref|YP_003311925.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094654|gb|ACZ24645.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 822

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA         NPV+  +   +F R++ Y D+LL+ 
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDGA----CWRCDNPVEKKDLSQWFLRITEYADRLLTD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDHWPQRVKLMQKNWIGRSEG 229



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 119/343 (34%), Gaps = 44/343 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E+ G            L          +     +E            
Sbjct: 429 QRYWGVPIPVVYCEKCGEQLVPEEQLPVRLPENVKFESGAVSPLATSESFLNTTCPKCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYTDAKNDQAPFDKKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLDLIEANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++      +D  +   G++              + R   ++    +    
Sbjct: 599 TYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIVDTYNEEAKK 649

Query: 379 T-PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              G  T+ + ++     RV++++ E++  N   + A++ ++ LV+ +  Y         
Sbjct: 650 NVTGELTKDEFALRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMYAY--------- 700

Query: 437 KKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILF 478
                D+A T+      E+ R L +LL  FVP +  +++  L 
Sbjct: 701 ----KDKAETINSALANELTRSLLLLLAPFVPHITEELWHELG 739


>gi|121729823|ref|ZP_01682256.1| leucyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628427|gb|EAX60921.1| leucyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 894

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 67  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 127 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 187 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 243 DNLDGWPEMVKTMQRNWIGRSEG 265



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 529 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 588

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 589 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDTTGRQVE 648

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 649 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 702

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 703 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 762

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 763 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 809

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 810 ALGQSNIDTASWPTYDEA 827


>gi|183179693|ref|ZP_02957904.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|183013104|gb|EDT88404.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 894

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 67  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 127 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 187 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 243 DNLDGWPEMVKTMQRNWIGRSEG 265



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 529 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 588

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 589 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 648

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 649 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 702

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 703 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 762

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 763 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 809

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 810 ALGQSNIDTASWPTYDEA 827


>gi|294791905|ref|ZP_06757053.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457135|gb|EFG25497.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 822

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA         NPV+  +   +F R++ Y D+LL+ 
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDGA----CWRCDNPVEKKDLSQWFLRITEYADRLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDHWPQRVKLMQKNWIGRSEG 229



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 117/343 (34%), Gaps = 44/343 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E+ G            L          +     +E            
Sbjct: 429 QRYWGVPIPVVYCEKCGEQLVPEEELPVRLPENVKFESGAVSPLATSESFLNTTCPKCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYADAKNDQAPFDKKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLGLIEANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++      +D  +   G++              + R   +I    +    
Sbjct: 599 TYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIIDAYNEEAKK 649

Query: 379 T-PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              G  T+ +  +     RV++++ E++  N   + A++ ++ LV+ +            
Sbjct: 650 NVTGELTKDEFGLRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMY----------- 698

Query: 437 KKTNPDRASTVLYVTVEVI-RQLAILLQAFVPKLANKIFDILF 478
              + D+A T+       + R L +LL  FVP +  +++  L 
Sbjct: 699 --AHKDKAETINSALANELTRSLLLLLAPFVPHITEELWHELG 739


>gi|221133507|ref|ZP_03559812.1| valyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 923

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 128/394 (32%), Gaps = 81/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  + +     +   ES     +P    N+        ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVAVESLAKPAIEAVESGEIRFVPENY-NKTYYQWMHNIQDWCISRQ-LWW 405

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +      T G+ +
Sbjct: 406 GHRIPAWYDEANNVYVGRDEAEVRAKHGLADDVALRQDEDVLDTWFSSALWPFATMGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                   F P+ + V G DI+ F    +       +  +P      +      KG+K+S
Sbjct: 466 ETP-ELETFLPSSVLVTGFDIIFFWVARMIMMTKKFTGKIPFKDIYITGLIRDEKGDKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGIELEPLVAKRTSGMMNPQDAKKIEKSTRKEFPEGINAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTES 386
                 +  +D  +D   ++     +  N I N  SR V M  +++D          + +
Sbjct: 585 TFAAMASTSRDINFDMGRVEG--YRNFCNKIWN-ASRFVLMNTEEFDTGKDGGELTLSLA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           DE I+    + + ++ + M +     A   +         D Y +  KP  L       A
Sbjct: 642 DEWIIDTFQQTIHDVEKAMNDYRFDLAAQSLYEFTWNQFCDWYLELSKP-ILNSDESTEA 700

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                 +  +  + QL  L   F+P +  +I+  
Sbjct: 701 QKRGTRHTLINTLEQLMRLAHPFMPYITEQIWQR 734



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           +   I           H+GHA++  I D L R+HR+ G + L+  GTD  G         
Sbjct: 31  DPYCILLPPPNVTGNLHMGHAFQHTIMDALTRYHRMKGDNTLWQCGTDHAGIATQMVVER 90

Query: 60  --------------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHD 104
                         +A  +     K     N  +  R +    D S + F  T +    +
Sbjct: 91  QLNAKGQTRHDLGREAFVDKIWEWKEESGGNISQQMRRLGTSPDWSREAF--TMDDDLSN 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ K+ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 149 AVQEVFVKLHEEGLIYRGKRLVNWDPVLLTAVSDLEVLNEEENGHMWHMRYPL 201


>gi|55981036|ref|YP_144333.1| isoleucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296710|sp|P56690|SYI_THET8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55772449|dbj|BAD70890.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) (IleRS)
           [Thermus thermophilus HB8]
          Length = 1043

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 126/374 (33%), Gaps = 13/374 (3%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEG--YFFRL 169
                +  +      +DE    + E++       +G+Y     N V W       +   L
Sbjct: 397 MYYATESWFIKNTLFKDELIRKNQEIHWVPPHIKEGRYGEWLKNLVDWALSRNRYWGTPL 456

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
             +  +     E+   F     R  + +          +         G  +   P Y++
Sbjct: 457 PIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGGTMRRVP-YVI 515

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            VW D+      +  Y    +    + +PAD    G D     F++++    +L  ++  
Sbjct: 516 DVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAF 575

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +  KG+K+SKS GNV+DP ++I E G DALR+++        D  +  + +
Sbjct: 576 KNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADALRWYIYVSAPPEADRRFGPNLV 635

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENM 405
           ++ V                   L   D   P P     E D  +L+    ++Q + E +
Sbjct: 636 RETVRDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEAL 695

Query: 406 QNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      +   +   V       Y    +    K  +            E +  +A L  
Sbjct: 696 EAYDPTTSARALRDFVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALVLVATLAA 755

Query: 464 AFVPKLANKIFDIL 477
            F P LA  ++  L
Sbjct: 756 PFTPFLAEVLWQNL 769



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 47/164 (28%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +  +       N  PH+GHA      D+  R+  + G       G D HG  +   
Sbjct: 35  KGGPRYTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELE 94

Query: 62  AQNA--GVTTKVFVDQNSRNFRDMADVLDISYDDF-----------------IRTTEKRH 102
            +      + +         F         +Y+                     T E  +
Sbjct: 95  VEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLENAYATLEPTY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + D+G +Y+      Y  R     +  EV  G  
Sbjct: 155 IESIWWSLKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYK 198


>gi|189467740|ref|ZP_03016525.1| hypothetical protein BACINT_04132 [Bacteroides intestinalis DSM
           17393]
 gi|189436004|gb|EDV04989.1| hypothetical protein BACINT_04132 [Bacteroides intestinalis DSM
           17393]
          Length = 876

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 136/392 (34%), Gaps = 57/392 (14%)

Query: 139 DEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D+V    +   Y+ + N V +      +F ++  + D  L    +      P + +N   
Sbjct: 333 DKVEAYTNKVGYSERTNVVIEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-Y 391

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP------------------------------------ 221
            +    +KD  +SR+   WG +IP                                    
Sbjct: 392 RYWMENIKDWCISRQ-LWWGHRIPAYFLPEGGYVVAATEEEALKLAKEKTGNPALTMEDL 450

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAF 278
              +  +  W  +    ++    ++NP   + + ++P    V G DI+ F    +    +
Sbjct: 451 RQDEDCLDTWFSSWLWPISLFDGINNPGNEEISYYYPTSDLVTGPDIIFFWVARMIMAGY 510

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                +P     F+       G K+SKSLGN  DP+E+IE+ G D +R  ++     G D
Sbjct: 511 EYEGKMPFKNVYFTGIVRDKLGRKMSKSLGNSPDPLELIEKFGADGVRMGMMLAAPAGND 570

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D    ++    +  N I N         +   D   P P A   +     S  + V 
Sbjct: 571 ILFDDALCEQ--GRNFCNKIWNAYRLVSGWTI---DDSQPVPEAARLASCWFESKQNEVA 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEV 454
            E+ +      +  AL  V  L      ++D    W L+   P        ++    +  
Sbjct: 626 AEVADLFSKYRLSEALMAVYKL------FWDEFSSWYLEMIKPAYGQGIHSSIHSAAISY 679

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              L  LL  F+P +  +++  ++  +E    
Sbjct: 680 FDNLLHLLHPFMPFITEELWQQMYEREEGESL 711



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|262168630|ref|ZP_06036325.1| leucyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|189083213|sp|A5F2X0|SYL_VIBC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|262022748|gb|EEY41454.1| leucyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 858

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFYKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 774 ALGQSNIDTASWPTYDEA 791


>gi|78223503|ref|YP_385250.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123770264|sp|Q39T99|SYL_GEOMG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78194758|gb|ABB32525.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 824

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 7/242 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     I DV+ RF RL G +VL   G D  G     AA
Sbjct: 31  SKPKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRLRGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     + +SY  D  + T +  ++   + ++ ++ +KG  Y
Sbjct: 91  IQHKSHPAKWTYENIAYMRSQLKKMGLSYDWDRELATCDLDYYKWEQKVFLEMYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +  + E    +++V  GA         + V   E E +FFR++ Y ++LL Y 
Sbjct: 151 KKTSYVNWCPKCETVLANEQVEDGA----CWRCDSEVTQKELEQWFFRITDYAEELLEYT 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           E  P +   +            G  ++    +     IK+    Q  +Y           
Sbjct: 207 EKLPGWPERVLTMQRNWIGKSYG-CEIDFPVEGSLAKIKVFTTRQDTLYGATFMSLAPEH 265

Query: 241 TT 242
             
Sbjct: 266 PM 267



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 30/280 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y          D ++A++W   D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFVQSSWYFLRYCCPDFAAGPIDKARAEYWMSVDQYIGGIEHAVLHLLYARFFTKA 553

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 ++ + P    + + G ++  G K+SKS GNV+DP  +I   G D  R F +   
Sbjct: 554 LRDLGYVTVDEPFT-NLLTQGMVIKDGAKMSKSKGNVVDPDALINRYGADTARLFSLFAA 612

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +   G+         + +  LV   +  + K          + ++    +   
Sbjct: 613 PPEKDLDWSDQGVDGSYR--FLSRVWRLVCDLLPFVGKG---GAVDSASLSDDARGLRRA 667

Query: 394 CSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + ++++ +++ +    + A+A ++ LV+ +  +             P  A     V  
Sbjct: 668 VHKTIRKVTDDIDERFHFNTAIAAIMELVNAIYAF------------EPKNAPENGPVLT 715

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLD 490
           E I  + I+L  FVP +  ++++ L      E   + S D
Sbjct: 716 EAIESVVIMLSPFVPHVTEELWEALGHQGGVEAAGWPSFD 755


>gi|126733398|ref|ZP_01749145.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716264|gb|EBA13128.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 1045

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 11/261 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            I  DP  ++  W  +      T G+  +      K++P D+ V G+DIL F    +   
Sbjct: 608 PIWRDPD-VLDTWFSSGLWPFGTLGWPADD--EAMKYFPGDVLVTGQDILFFWVARMMMM 664

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  +    P             KGEK+SK+ GNVIDP+++I+  G DALR+   +  A G
Sbjct: 665 SQAVLEQDPFHTVYLHQLVRDAKGEKMSKTKGNVIDPLDMIDAYGADALRFSNAQMAALG 724

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                 +D +K     +    + N  S +    +  Y G    P A    ++ I+    +
Sbjct: 725 GVLKISEDRIKG--YRNFGTKLWNAFSFADHYQIA-YPGDAARPDATQTLNKWIIGETGK 781

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           V + +   M     + A   + +       D Y +  KP  L+  +    +        V
Sbjct: 782 VREVVDAAMAAYRFNDAADALYAFTWGKVCDWYLEFSKP-ILQGDDAAAKAETEQTLRWV 840

Query: 455 IRQLAILLQAFVPKLANKIFD 475
           + Q  ILL   +P +  +++ 
Sbjct: 841 LDQCLILLHPIMPFITEELWQ 861



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 61/197 (30%), Gaps = 30/197 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   I D+L R+ R+ G D L+  G D  G       + 
Sbjct: 53  ETFCIMLPPPNVTGHLHVGHAFNHTIMDMLTRWKRMQGYDTLWQPGLDHAGIATQLMVEK 112

Query: 64  -------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEK--- 100
                                    K     Q  +  R + D +D S   F  +  +   
Sbjct: 113 DLAAKGQPKRTELGRDTFLEKVWEWKEANGGQIEQQARRLGDSMDWSRSAFTMSGAESAP 172

Query: 101 ------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++ ++ +KG IY+G     +    E   +D EV       +     
Sbjct: 173 AGEKPGNFHDAVLKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVNGHMWHFK 232

Query: 155 NPVQWMEEEGYFFRLSA 171
            P+   E   Y  +   
Sbjct: 233 YPLAGGETYEYVEKDED 249


>gi|88601905|ref|YP_502083.1| isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121731688|sp|Q2FPJ4|SYI_METHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|88187367|gb|ABD40364.1| Isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 1062

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 139/408 (34%), Gaps = 71/408 (17%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ +   E +F  +   ++K+LS          P    +       S  +D  
Sbjct: 392 HCWRCKTPIIYRATEQWFISVPKMKEKMLSEI--KATSWYPDWAGSARFYDFVSDARDWC 449

Query: 209 LSRKTFDWGIKIP---------------------------DDP----------------- 224
           +SR+   WGI IP                            DP                 
Sbjct: 450 ISRQR-YWGIPIPVWQCSSCSAHRVFGTVAELNAAAGSNLTDPHRPYVDEITVPCSCGGT 508

Query: 225 ----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I  VW D+      T G+  N      + WPAD    G+D     F++    + 
Sbjct: 509 MKRVEDIFDVWFDSAMASWATLGFPRNDA-LFHEMWPADFITEGQDQTRGWFYSQLGAST 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P    +     +   G K+SKSLGNV+ P EV+++ GVD LR +++   A  +D
Sbjct: 568 IAFNRSPYKSVLMHGFALDADGRKMSKSLGNVVTPEEVVQKFGVDVLRLYILSSNAPWED 627

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPG------------AFTE 385
             ++ DG+         N + N+    +  MIL  +     + G               E
Sbjct: 628 LKFNWDGVSTVNRT--MNILWNVYRFPLPYMILDGFSPAQTSDGKYDDEYIVRSYREMPE 685

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR 443
            D  I+S  + + + +  +M    +HR    +++ +       Y    +P    + +   
Sbjct: 686 IDRWIISRINTIARSVSADMDEYQLHRVTRLLMNFILEDLSRWYVQIVRPRMWLEEDSPD 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                      +R L  LL  F P +   +++ L + ++      L  
Sbjct: 746 KKFAYETITYCLRTLCRLLAPFTPHITEAMYENLRLPEDPVSVHMLKW 793



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +  +      Y     H+G A+  I+ D + R+ R+ GL V+   G D HG  I   
Sbjct: 35  RDGKTWFFVDGPPYTTGHIHLGTAWNKILKDSILRYKRMHGLHVIDRAGYDMHGLPIEVR 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            ++                      K F   +     +    L +  ++DD  +T    +
Sbjct: 95  VEHELGFENKKDIEAFGIGAFIERCKQFALSHKDIMSEQFKSLGVWMNFDDPYQTIMPEY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +      K+  +KG + +G     +  R E    D EV    +
Sbjct: 155 IEAAWWTLKQADEKGLLDRGHRVVNWCPRCETAIADSEVEYWDE 198


>gi|325290557|ref|YP_004266738.1| leucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965958|gb|ADY56737.1| leucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 827

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y      YP+   H+GH     I DV+ARF R+ G  VL   G D  G     AA
Sbjct: 30  DRQKFYALAMFPYPSGNLHMGHVRNYSIVDVIARFKRMQGYHVLHPIGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N  N R     + ISY  D  I T    ++   + ++ ++   G  Y
Sbjct: 90  IKNQTPPAEWTWKNIANMRSQLQEMGISYDWDREIATCHPEYYRWTQWIFLELYQHGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +         +++V  GA           V   + E +FF+++ Y ++LL+  
Sbjct: 150 KKKSAVNWCPSCNTVLANEQVVDGA----CERCETEVTKKDLEQWFFKITDYSEELLNDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E    +   ++           G
Sbjct: 206 EKLTGWPEKVKTMQRNWIGRSEG 228



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 99/288 (34%), Gaps = 42/288 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y       +         W   D +V G +    H +Y   F   
Sbjct: 495 DTMDTFMCSSWYFLRYCDPRNAKEAFAAEAVDKWMNVDQYVGGVEHAILHLLYSRFFTKV 554

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L  + P  + + + G +   G K+SKS GNV+ P E+I   G D  R F++   
Sbjct: 555 FRDFGYLHVDEPF-ENLLTQGMVCMDGSKMSKSKGNVVSPEEIIGRFGADTARLFILFAA 613

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD------ 387
              +D  + + G++         G    ++R   +  + ++ +       T+S+      
Sbjct: 614 PPERDLEWSEQGVE---------GCYRFLNRVWRLAYQYHEAVRVREDVQTDSNETGEQG 664

Query: 388 -ESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            + I       ++++  ++      + A++ V+ LV+ +           L K  P    
Sbjct: 665 IKDIRRQIHLAIKKVTADVGTRFNFNTAISSVMELVNAL----------YLYKEQP---G 711

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQ 491
                  E I  + +LL  F P +  +I+      +    R +   D+
Sbjct: 712 ADPASFKEGIETVLLLLSPFAPHITEEIWHEFGHEESIHRRAWPQCDE 759


>gi|300114523|ref|YP_003761098.1| valyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540460|gb|ADJ28777.1| valyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 929

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 133/401 (33%), Gaps = 84/401 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F + +   +  +   E+     +P    N++       ++D  +SR+   W
Sbjct: 348 IEPYLTDQWFVKTAPLAEPAIQAVENGQIRFIPENW-NKIYFEWMRNIQDWCISRQ-IWW 405

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    DP+  +YV                            W  +     +T G+ +
Sbjct: 406 GHRIPAWYDPEGKIYVASTETQARQKYNLPPDLPLEQDPDVLDTWFSSALWPFSTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +A F+P  + V G DI+ F    +       +  +P  +          +G+K+S
Sbjct: 466 KTSSLQA-FYPTSVLVTGFDIIFFWVARMIMMGLKFTGEVPFHEVYIHGLVRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNV+DP+++I                                        G DALR+
Sbjct: 525 KSKGNVLDPLDLIDGIDLETLVTKRIGGLMQPAMAKRIEKATRKEFPQGIPSFGCDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES- 386
                   G+D  +D   ++     +  N + N     +     +      +    TE+ 
Sbjct: 585 TFAILATRGRDIRFDLGRIEG--YRNFCNKLWNAARYVLMNASSEIVAEKQSKPEQTEAN 642

Query: 387 ------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                 +  I+S      QE+ E ++N    RA   +         D Y +  KP     
Sbjct: 643 FMLGAPERWIISRFQSTTQEVIEGIENYRFDRAAQAIYDFTWNEYCDWYLELSKPVLNNP 702

Query: 439 TNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +P+ A     +  + V+  L  L    +P +  +I+  + 
Sbjct: 703 ASPEAAKRGTRHTLLHVLEALLRLAHPIIPFITEEIWQQVG 743



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+HR+ G   L+  G D  G       +N   
Sbjct: 34  CIMIPPPNVTGHLHMGHAFQNAIMDALIRYHRMRGDKTLWQVGADHAGIATQMVVENQLN 93

Query: 68  TT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           +V+  +       +R  R M   +D S + F  T ++       
Sbjct: 94  AEGKTRHDLGREVFIQRVWAWKEHSGGTITRQLRRMGASVDWSRERF--TMDEGLSQAVC 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ D+G +Y+G     +        +D EV    +  +      P+
Sbjct: 152 EVFVRLYDEGLLYRGQRLVNWDPVLHTAISDLEVTSEEENSHLWHMRYPL 201


>gi|255744739|ref|ZP_05418690.1| leucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161127|ref|ZP_06030238.1| leucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|14285779|sp|Q9KTE6|SYL_VIBCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|255737770|gb|EET93164.1| leucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262028877|gb|EEY47530.1| leucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|327483681|gb|AEA78088.1| Leucyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 858

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 774 ALGQSNIDTASWPTYDEA 791


>gi|146308545|ref|YP_001189010.1| valyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145576746|gb|ABP86278.1| valyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 943

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 134/393 (34%), Gaps = 78/393 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +K ++  ES     +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEKAIAVVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                            + ++  W  +     +T G+ + 
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEAEVRAKHNLEGVALRQDEDVLDTWFSSGLWTFSTLGWPEQ 488

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            D  K    P D+ V G DI+ F    +   +  L+  +P             +G+K+SK
Sbjct: 489 TDFLKTFH-PTDVLVTGFDIIFFWVARMIMLSTHLTGQIPFKTVYVHGLVRDGQGQKMSK 547

Query: 306 SLGNVIDPIEVIE-------------------------------------EVGVDALRYF 328
           S GNV+DP+++++                                       G DALR+ 
Sbjct: 548 SKGNVLDPLDIVDGITLDELLEKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDALRFT 607

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                  G+D  +D   ++     +  N + N  +  +        G+   P   +  D 
Sbjct: 608 FCSLATTGRDVKFDMGRVEG--YRNFCNKLWNATNFVLENTEGKDCGVNGEPVELSAVDR 665

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDRA 444
            I+S   R  Q++  ++       A   +   V +     Y +  KP  L     + +R 
Sbjct: 666 WIISALQRCEQDVTRHLDAFRFDLATQALYEFVWDEYCAWYLELVKP-VLWDETASAERQ 724

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  V V+  +  L   F+P +  +I+  +
Sbjct: 725 RGTRRTLVRVLEVILRLAHPFMPFITEEIWQRI 757



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L RF R+ G + L+  GTD  G       + 
Sbjct: 31  EPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMVVER 90

Query: 64  -------------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +N       R  R +   +D S + F  T +    +
Sbjct: 91  QLAAQGIGRHDLGREKFLEKVWEWKNQSGGTITRQIRRLGSSVDWSRERF--TMDDGLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ + G IY+G     +  +     +D EV    +         P+
Sbjct: 149 AVKEAFVRLHEDGLIYRGKRLVNWDTKFHTAISDLEVENHDEKGSLWNLRYPL 201


>gi|262172034|ref|ZP_06039712.1| leucyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893110|gb|EEY39096.1| leucyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 858

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNEKGGKEWVSPTEVKVERDGKGRIVSAADASGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHVCFEMWA 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  +D +   + + D+ 
Sbjct: 774 ALGESDIDTASWPTYDEA 791


>gi|229525566|ref|ZP_04414971.1| leucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339147|gb|EEO04164.1| leucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 878

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 51  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 111 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 171 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 226

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 227 DNLDGWPEMVKTMQRNWIGRSEG 249



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 513 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 572

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 573 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 632

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 633 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 686

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 687 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 746

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 747 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 793

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 794 ALGQSNIDTASWPTYDEA 811


>gi|153213841|ref|ZP_01949047.1| leucyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124115675|gb|EAY34495.1| leucyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 858

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDTTGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTETQDRA-----ILDEALKAITLMLYPITPHICFEMWV 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 774 ALGQSNIDTASWPTYDEA 791


>gi|325957912|ref|YP_004289378.1| isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329344|gb|ADZ08406.1| Isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 1060

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 90/468 (19%), Positives = 167/468 (35%), Gaps = 29/468 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       +      DE G  +  A +  G     FV    +      +  ++       
Sbjct: 346 FEIGKKYGMPIFCPVDEAGLFMEDAGKYQG----EFVKDADQEIIADLESHNLLLK---A 398

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           TT K  +  C      I       K  +     ++D+     D+V         N   N 
Sbjct: 399 TTIKHRYGFCWRCKTPII--YLATKQWFLKITDIKDKMLSELDKVEWVPSWAGENRFRNW 456

Query: 157 VQ------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSL 209
           V+         +  +   +  ++ +               ER  E  +         +  
Sbjct: 457 VENARDWTISRQRYWGIPIPIWECEDCGEITVVGSISELKERLIEGKLDGDFIHRPHVDE 516

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
            R   + G K+   P  ++ VWID+         Y +  +    +++P D    G D   
Sbjct: 517 IRIGCECGGKMKRVPD-VLDVWIDSGVAGWAALHYPEETE-LFDEWYPYDFITEGHDQTR 574

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F++      + + + P  K +     +  +G+K+SKSLGNV++P EVIE  G D LR+
Sbjct: 575 GWFYSQLGCGVITNDSTPYKKVLMHGFTLDEEGKKMSKSLGNVVEPEEVIELYGADVLRF 634

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTE 385
           +L+      +D  +  D LK  VN          V  +  M + ++D    TP      +
Sbjct: 635 YLLWGNKPWEDLKFVWDELKN-VNKMFNILWNVYVFSTTYMSIDNFDPTAYTPEDVKLRD 693

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNP 441
            D  I S  + + +E+ E++ +   H+A   +   +       Y      + W ++K +P
Sbjct: 694 EDLWITSRANSLAKEVTESLDSLHFHKATRAINHFILEDLSRWYIRLIRGRTW-IEKDDP 752

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           D+     Y     +R L + +   VP +   I+  L  + E    +S+
Sbjct: 753 DKLGA-YYSLYYALRLLIVTMSPIVPHITEDIYQNLVRSVEMDALESI 799



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 20/184 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K        Y + + H+G A+  II D   R+  ++G ++    G D HG  I   
Sbjct: 37  ENKPKYSFLDGPPYCSGKIHLGTAWNKIIKDTYLRYKSMEGFNIRRQAGWDTHGLPIEHK 96

Query: 62  ------------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
                              +N     K F  +N        ++L +   +D+   T + +
Sbjct: 97  VEGLLGLKSKKEIEETIGIENFVNKCKEFAIENKGLMTKQFEMLGVWMDWDNPYVTFDTK 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + ++     KK  +K  + K      +  R E      E+              P+   E
Sbjct: 157 YMESSWWTLKKAYEKDLLIKDKRVITWCPRCETALAMAEIDYEDKEDPSIYVKFPLMTQE 216

Query: 162 EEGY 165
              Y
Sbjct: 217 SSDY 220


>gi|188993104|ref|YP_001905114.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|254783560|sp|B0RVI4|SYV_XANCB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|167734864|emb|CAP53075.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 944

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 74/416 (17%), Positives = 136/416 (32%), Gaps = 89/416 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQVKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDEAGKCYVGHDEAQVRATHGLGAEVALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
                    A++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 AQAMDERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEDLVAKRTSGLMQPRMAEKIEKATRKEFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +    L + +G   +  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFALMNTEGAQFSGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE++  IL+    V  E + +  N         +         D + +  KP  L    
Sbjct: 664 QTETERWILARLDAVAAEAQAHYANYRFDLLAQTLYEFAWNAFCDWFVELAKP-ALNGAV 722

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQR 492
            D A +  +  + V+  L  LL    P +  +++      L +  +    Q+  QR
Sbjct: 723 QDAADSTRHTLLYVLEALLRLLHPLTPFVTEELWQQVAPRLGITGDTISLQAFPQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDTLGREGFIAKVWEWKAQSGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVTEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|254372856|ref|ZP_04988345.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570583|gb|EDN36237.1| leucyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 813

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +   ++           GL        T  + IK  +    +     D L  
Sbjct: 206 NKLDNWPEAVKTMQINWIGKSKGL--------TVKFKIKDSNQEIEVFTTRPDTLMG 254



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 76/483 (15%), Positives = 148/483 (30%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISGETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYDIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVTLTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKD 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +++ ++ Y + 
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
            +                 V VE    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 699 SE----------------SVKVEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDG 745


>gi|312876049|ref|ZP_07736038.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797247|gb|EFR13587.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 817

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y+
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    E    +++V  G          + V   + E +FFR++ Y ++LL   E
Sbjct: 150 KRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRDIE 205

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 206 KLDGWPEKVKIMQKNWIGRSEG 227



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/451 (14%), Positives = 149/451 (33%), Gaps = 41/451 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + +   + +     +  ++     E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLPIKVVIKGEGVDIENLQSAYEDEGVLINSGIFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +   + K            A             Q Y     P+ + +E G        
Sbjct: 390 LKNTDAMKKITQHLEQKGVGRACVTYKLRDWLISRQRYWGAPIPIVYCDECGIVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y               E           ++ +        K   D         
Sbjct: 450 LPVLLPYNVEFKPTGQSPLSYCEEF---------VNTTCPKCGKPAKRETDTMDTFICSS 500

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----LLSANLPL- 286
                Y          + S   +W P D ++ G +    H +Y   F         +P  
Sbjct: 501 WYYFRYTDPKNSQKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFE 560

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   
Sbjct: 561 EPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQ 620

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++        N +  L     S +  +      +    +E D+ +    +  ++++ E+
Sbjct: 621 GVEGCFR--FLNRLWRLYIELKSKLADE------SLLGESELDDELKYRLNYTIKKVTED 672

Query: 405 M-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    + A++ ++ L++ +  Y   ++  +L K           + ++ +R L IL+ 
Sbjct: 673 IGERFNFNTAISTIMELLNFLYEY---KEKGKLNKD----------LIIDTLRNLLILIY 719

Query: 464 AFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
            F P +A ++++I+   +  E   +   D+ 
Sbjct: 720 PFTPHIACELWEIMGFGEDIEEVSWPQYDEA 750


>gi|170078301|ref|YP_001734939.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692812|sp|B1XP90|SYL_SYNP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169885970|gb|ACA99683.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 852

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+ + H+GH    +I DV+AR+ R+ G  VL   G D  G     A
Sbjct: 30  SDKPKFYALSMFPYPSGKLHMGHVRNYVITDVIARYKRMQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G+    +  QN    R+    L   I +D  + T    ++   + L+ +    G  
Sbjct: 90  AIDRGIPPAKWTYQNIAQMREQLKQLGLSIDWDREVATCSPDYYKWTQWLFLQFYKAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+      +F +++ Y ++LL  
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQVDAE---GRSWRSGAIVEKKLLRQWFLKITDYAEELLQD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
             +   +   ++   E      +G
Sbjct: 207 LNTLDGWPERVKLMQENWIGKSTG 230



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 28/209 (13%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    EK+SKS  N +DP  V+++ G D  R F++ +    KD  +D   +
Sbjct: 599 PKDPETGEPLTGFYEKMSKSKYNGVDPALVLDKYGADTARMFILFKAPPEKDLEWDDADV 658

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +      N I NLV+       +  +  +   G  +++++ +       ++EI+E+++
Sbjct: 659 EGQFR--FLNRIWNLVA-----GYEAAETSVKATGELSKAEKDLRRAVHTAIKEIQEDLE 711

Query: 407 -NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQA 464
            +   + A+A+++ L    +                     V   V  E I  L +LL  
Sbjct: 712 GDYQFNTAIAELMKL----NNAI-------------KDVKCVDSPVYKEAIETLILLLAP 754

Query: 465 FVPKLANKIFDILFVADENRC--FQSLDQ 491
           F P +A++++  L  ++      F  LD+
Sbjct: 755 FAPHIADELWSNLGHSESIHTVPFPQLDE 783


>gi|258621973|ref|ZP_05717002.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258585726|gb|EEW10446.1| Leucyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 894

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 67  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 127 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFEKGLVY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 187 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 243 DNLDGWPEMVKTMQRNWIGRSEG 265



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 529 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 588

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 589 VKSDEPFKKLLCQGMVLADAFYYTNEKGGKEWVSPTEVKVERDGKGRIVSAVDASGRQVE 648

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 649 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 702

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 703 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 762

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 763 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHVCFEMWA 809

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  +D +   + + D+ 
Sbjct: 810 ALGESDIDTASWPTYDEA 827


>gi|85713129|ref|ZP_01044162.1| Valyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693045|gb|EAQ31010.1| Valyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 949

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 82/437 (18%), Positives = 145/437 (33%), Gaps = 84/437 (19%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G           +  +E    D          Y +    P++    + ++ R+ +   + 
Sbjct: 334 GLERFEARKQIIAAFEELELLDKIEKHTNKVPYGDRGGVPIEPHLTDQWYVRVESLAKQA 393

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV---- 230
               E      +P +  N   S+++  ++D  +SR+   WG  I    D Q  +YV    
Sbjct: 394 TEAVEDGRIEFVPKQYENMYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDEQGNVYVGRSE 451

Query: 231 -----------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                                  W  +     +T G+ +  D  K    P D+ V G DI
Sbjct: 452 EEVRKENDLGDIKLSQDDDVLDTWFSSALWTFSTLGWPEQTDDLKTFH-PTDVLVTGFDI 510

Query: 268 LRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + F         +           +P  K   +      +G+K+SKS GNV+DP+++I+ 
Sbjct: 511 IFFWVARMIMMTMHFLKDENGQPQVPFKKVYVTGLIRDEEGQKMSKSKGNVLDPLDMIDG 570

Query: 320 V-------------------------------------GVDALRYFLVREIACGKDGFYD 342
           +                                     G DALR+ L    + G+D  +D
Sbjct: 571 ISADALVEKRTANLMQPKMREKIAKATRKQFPEGIAAHGTDALRFTLTALASTGRDINWD 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEI 401
              L+     +  N + N  SR V M  +++D          + +DE I++  +  ++E 
Sbjct: 631 MKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGQSGEDYRLSLADEWIIARFNHTVKEF 687

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           R  +      +A A           D Y +  KP  L               V V+ QL 
Sbjct: 688 RHALDTYRFDQAAAIAYEFTWNQFCDWYLELTKP-VLNNGTEAEQRGTRRTLVTVLEQLL 746

Query: 460 ILLQAFVPKLANKIFDI 476
            LL   +P +   I+  
Sbjct: 747 RLLHPVLPYITETIWHR 763



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 24/174 (13%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ------ 63
            I  PN     H+GHA++  I D+L R+ R+DG + L+  G+D  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQHTIMDILTRYQRMDGKNTLWQVGSDHAGIATQMVVERQLAAE 95

Query: 64  --------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         KV+  +       +   R + D +D   + F  T ++        +
Sbjct: 96  GKSRADLGREAFIDKVWEWKQESGGTITSQMRRLGDSVDWDRERF--TMDEGLSKAVLEV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           + K+  +G IY+G     +  + +   +D EV       +      P+   E+ 
Sbjct: 154 FVKLHKEGLIYRGKRLVNWDPKLQTAISDLEVENKEQQGHIWHLRYPLADGEKT 207


>gi|50120248|ref|YP_049415.1| leucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|60390692|sp|Q6D7L6|SYL_ERWCT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49610774|emb|CAG74219.1| leucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G     D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFDVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQIMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                   TE  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRQAFEHTGKGAVTALDITTLTEDQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   ++++ DRA     +T E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP---QESDQDRA-----LTQETLLAVVRMLYPFTPHVCFTLWQALQG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDVDTAPW 787


>gi|308189153|ref|YP_003933284.1| Valyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308059663|gb|ADO11835.1| Valyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 951

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 140/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNNGNVYVGRTEDEVRAENNMAADVALRQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPDGIEPSG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGQNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILTEFNNTVKAYREALDSYRFDIAANLLYDFTWNQFCDWYLELTKP-VMNS 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            +        +  V V+  L  L    +P +   I+  +     ++D+    Q   Q
Sbjct: 727 GSEAELRGTRHTLVHVLEALLRLAHPIIPFITETIWQRVKGLKNISDDTIMLQPFPQ 783



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|291165693|gb|EFE27741.1| isoleucine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 1035

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 146/390 (37%), Gaps = 27/390 (6%)

Query: 108 ILWKKISDKGDIYKGCYSGW-YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             W+  +      K  Y       +D+   N++EV    D        N ++      + 
Sbjct: 389 HCWRCATPLLYYAKPSYYIEVTKFKDKLIENNNEVNWFPDYVGEKRFGNWLE--NLNDWA 446

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNE----VISFVKSGLKDLSLSRKTFDWGIKIPD 222
              S Y    L+ +         I  R E     I  +   ++             +   
Sbjct: 447 ISRSRYWGTPLNIWRCECGHETTIGSRKELKEKAIETIDETIELHRPYVDDVHIECEHCK 506

Query: 223 DPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            P      ++ VW D+         Y           +PAD    G D     F+++   
Sbjct: 507 KPMTRVKDVVDVWFDSGAMPFAQHHYPFEHKDDFDGLFPADFICEGIDQTRGWFYSLLAI 566

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  ++   P    + +   +   G+K+SKS GN +DP  + ++ G D LR++L+      
Sbjct: 567 STFMTGKTPYKNVLVNDLILDKDGKKMSKSKGNTVDPFALFDQYGADVLRWYLLYVSPPW 626

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESIL 391
               +D +GLK+   +     I N+ +  V  +  + D + P      P    E D  IL
Sbjct: 627 VPTRFDVEGLKEVQ-SKFFGTIKNVYNFFV--LYANTDEINPREFYVEPKDRAELDCWIL 683

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF--DAQKPWELKKTNPDRASTV 447
           S  +R+ QE+ +++    + + +  +   V+E   + Y     ++ WE   T   +  +V
Sbjct: 684 SKFNRLKQEVEQDLAVFEVTKVVRNIQDFVNEDLSNWYIRRSRRRFWETGLTEDKK--SV 741

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              T E++ +L+ ++  F P L+ +++  L
Sbjct: 742 YNTTYEILVELSQMIAPFAPYLSEEMYRNL 771



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ ++          N +P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 37  EDGKQFVFFEGPPTANGKPGIHHVIARTLKDYVCRYKTMQGYQVKRKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +    +RDM + +   I  DD   T    +
Sbjct: 97  VEKRLGLNDKTEIESYGIEAFNKQCRESVFEYEGLWRDMTERMAYLIDLDDPYITLNDEY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +  K+  +G IY+G     Y  R        EV +G  
Sbjct: 157 IESVWHILDKMYKEGYIYEGHKILPYCPRCGTGLASHEVAQGYK 200


>gi|262190523|ref|ZP_06048767.1| leucyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262033596|gb|EEY52090.1| leucyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 858

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTEFGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 774 ALGQSNIDTASWPTYDEA 791


>gi|271499707|ref|YP_003332732.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343262|gb|ACZ76027.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++ +  T       PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFRIADADDTLTVYTTRPDTFMGVTYVAVAAG 264



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 72/186 (38%), Gaps = 26/186 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++         G   
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVE---------GANR 668

Query: 361 LVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R    +          P    A T+  +++     + + ++ +++  +   + A+A 
Sbjct: 669 FLKRVWKQVYDHTGKGASAPLDTAALTDDQKALRRDLHKTIAKVTDDIGRRQTFNTAIAA 728

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L++            +L K  P  +     +T E +  +  +L  F P +   +++ 
Sbjct: 729 IMELMN------------KLAKA-PQESEQDRALTQETLLAVVRMLYPFTPHVCFVLWNE 775

Query: 477 LFVADE 482
           L    +
Sbjct: 776 LKGEGD 781


>gi|229505444|ref|ZP_04394954.1| leucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510886|ref|ZP_04400365.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229512951|ref|ZP_04402417.1| leucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229518007|ref|ZP_04407451.1| leucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608463|ref|YP_002879111.1| leucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|229344722|gb|EEO09696.1| leucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229349844|gb|EEO14798.1| leucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350851|gb|EEO15792.1| leucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357667|gb|EEO22584.1| leucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371118|gb|ACQ61541.1| leucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
          Length = 878

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 51  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 111 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 171 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 226

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 227 DNLDGWPEMVKTMQRNWIGRSEG 249



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 513 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 572

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 573 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 632

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 633 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 686

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 687 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 746

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 747 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 793

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 794 ALGQSNIDTASWPTYDEA 811


>gi|89256533|ref|YP_513895.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314961|ref|YP_763684.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502647|ref|YP_001428712.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010655|ref|ZP_02275586.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367858|ref|ZP_04983878.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|254369479|ref|ZP_04985491.1| hypothetical protein FTAG_00467 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|122325026|sp|Q0BLI7|SYL_FRATO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123094508|sp|Q2A307|SYL_FRATH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231607|sp|A7NCQ3|SYL_FRATF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89144364|emb|CAJ79651.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129860|gb|ABI83047.1| leucine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253668|gb|EBA52762.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253250|gb|ABU61756.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122429|gb|EDO66569.1| hypothetical protein FTAG_00467 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 813

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
                +   ++           GL
Sbjct: 206 NKLDNWPEAVKTMQINWIGKSKGL 229



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 76/483 (15%), Positives = 149/483 (30%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISAETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYNIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTKQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVALTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTSNQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +   +  +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAASPEQSLEWSETGVEG------ANKFLRKVFNYAELNKV 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +++ ++ Y + 
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
            +                 V VE    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 699 SE----------------SVKVEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|254525794|ref|ZP_05137846.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537218|gb|EEE39671.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 915

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 137/368 (37%), Gaps = 21/368 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              +    +  Y +   N   W      ++        +L   +   E   P        
Sbjct: 387 PSFIPPRWEKVYKDWLENINDWCISRQLWWGHQIPAWYVLDESQDSIEQNTP-------Y 439

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++    L  + K F   IK+  D   ++  W  +     +T G+ +  D    K++P
Sbjct: 440 VVARNEEDALIEANKKFGLNIKLVRDKD-VLDTWFSSGLWPFSTLGWPNINDLDFKKWYP 498

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V G DI+ F    +       + N+P               +K+SKS GN IDPI 
Sbjct: 499 NSVLVTGFDIIFFWVARMTMMGNTFTNNIPFKDVYIHGLVRDENNKKMSKSSGNGIDPIL 558

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSVSMI 369
           +I++ G DALR+ L+RE+A  G+D   D D  K        + + AN + N     +   
Sbjct: 559 LIDKYGSDALRFALIREVAGAGQDIRLDFDRKKDTSSTVEASRNFANKLWNATKFVLINK 618

Query: 370 LKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
             + +         +    D+ ILS  +++  ++   ++   +  +   +         D
Sbjct: 619 TSNNNDSLNESDENSLELCDKWILSKLNQINIKVAALLKEYKLGESAKLLYEFTWNDFCD 678

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K     K   +R      V ++V+  + +++  F+P +  +++ +L +  +N  
Sbjct: 679 WYVEFAKQRFNNKETINR-QISEKVLIKVLNDILVMIHPFMPHITEELWHVLQLKPDNEL 737

Query: 486 FQSLDQRL 493
                  +
Sbjct: 738 LSLQKWPI 745



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +           H+GHA+   + DV+ RF RL G +VL   GTD     +    
Sbjct: 36  DGEPFCVVIPPPNVTGSLHMGHAFNTALIDVVVRFQRLLGKNVLCLPGTDHASIAVQTIL 95

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + +Q+          +  S D      T +++ ++
Sbjct: 96  EKQLKNEGKTSEDIGRNEFLKRAWNWKEQSGGRIVSQLKRIGYSVDWTRERFTLDQKLNE 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  +  K  IY+G Y   +    ++  +D EV       +      P+
Sbjct: 156 AVIEAFNILHKKNLIYRGEYLVNWCPESQSAVSDLEVEMQEVNGHLWHFKYPL 208


>gi|161615134|ref|YP_001589099.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|168236642|ref|ZP_02661700.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168264419|ref|ZP_02686392.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168465825|ref|ZP_02699707.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194735156|ref|YP_002113766.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|189083146|sp|A9MUK3|SYL_SALPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693644|sp|B4TPX5|SYL_SALSV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161364498|gb|ABX68266.1| hypothetical protein SPAB_02902 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194710658|gb|ACF89879.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631913|gb|EDX50433.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197290284|gb|EDY29640.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205347105|gb|EDZ33736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGSVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|262165198|ref|ZP_06032935.1| leucyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262024914|gb|EEY43582.1| leucyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 858

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 493 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 552

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 553 VKSDEPFKKLLCQGMVLADAFYYTNEKGGKEWVSPTEVKVERDGKGRIISAVDASGRQVE 612

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 613 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 666

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 667 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 726

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 727 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWA 773

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 774 ALGESNIDTANWPTYDEA 791


>gi|229523252|ref|ZP_04412659.1| leucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339615|gb|EEO04630.1| leucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 878

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 51  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 111 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 171 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 226

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 227 DNLDGWPEMVKTMQRNWIGRSEG 249



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 513 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 572

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 573 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 632

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 633 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 686

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 687 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 746

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 747 AIMELMNKLTK-----AP---MTETQDRA-----ILDEALKAITLMLYPITPHICFEMWV 793

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 794 ALGQSNIDTASWPTYDEA 811


>gi|194337395|ref|YP_002019189.1| valyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309872|gb|ACF44572.1| valyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 903

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 122/363 (33%), Gaps = 47/363 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F ++    ++ L           P    N         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVKMKPLAEEALQVVNDGEIRFHPPHWINT-YRHWMGNIRDWCISRQ-LWW 420

Query: 217 G--IKIPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +    LTT G+ +   
Sbjct: 421 GHRIPAWYDSEGKVWVAASYEEACHLAGTDKLVQDDDVLDTWFSSWLWPLTTLGWTEKQS 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P D  V G DI+ F    +          +P     F+      KG K+SK
Sbjct: 481 DNDDLRAFYPTDTLVTGPDIIFFWVARMVMAGLYFKGAVPFRNVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DPI+V++  G DALR+ ++     G+D  + ++  +  +  + A  I N     
Sbjct: 541 SLGNSPDPIKVMDTYGTDALRFTIIYIAPLGQDVLFGEEKCE--LGRNFATKIWNASRLV 598

Query: 366 VSMILKDYDGMIPTPGAFTESD----------ESILSVCSRVLQEIRENMQNQLIHRALA 415
                K +         +   D          + +L+    +L+          ++  + 
Sbjct: 599 FMQREKYFRDHEEFAAVYLNFDPSSVTADLAGQWLLAGYHGMLERYHTAFTQFRVNDIVK 658

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +         D Y +A K     +   + A   + + V V+      L   +P + ++I
Sbjct: 659 NLYDFFWRDYCDWYLEALKVRLSGELTREDAQQTVCLAVYVLEGTLKALHPVMPFITDEI 718

Query: 474 FDI 476
           +  
Sbjct: 719 WHQ 721



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   +            +GH     + D+  R+ R+ G + L+  GTD  G      
Sbjct: 44  TGKEPYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYSRMTGKEALWLPGTDHAGIATQTV 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++           L IS D    + T ++   
Sbjct: 104 VERKLKKEGITRHDLGRKEFLGHVWQWREEYGDLILRQLRRLGISCDWRRNLFTMDEGAS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 +  +   G IY+G     +    +   +D+EV  
Sbjct: 164 KAVINAFITLYRDGLIYRGTRIINWCPVSQTALSDEEVIM 203


>gi|207856114|ref|YP_002242765.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238690399|sp|B5QVP9|SYL_SALEP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|206707917|emb|CAR32205.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|320108281|ref|YP_004183871.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926802|gb|ADV83877.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 846

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y+   + YP+ Q H+GH     I D LAR+  + G +VL   G D  G     A
Sbjct: 42  EGKPKYYVLEMLPYPSGQLHMGHVRNYSIGDALARYQWMRGFNVLHPMGWDSFGLPAENA 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N    R     + +SYD    + T    ++   + L+ K+ +KG  
Sbjct: 102 AIKNNIPPREWTLGNIAEMRVQMRRMGLSYDWQREVTTCLPDYYKWNQWLFLKMYEKGLA 161

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  +      +++V    +G+ +  +   V+  +   +FFR++ Y D+LL  
Sbjct: 162 YRKQSKVNWCPQCATVLANEQV---VNGRCWRHEDTVVEQRDLTQWFFRITKYADELLDG 218

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 219 IDKLDGWPEKVRTMQRNWIGRSEG 242



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 94/236 (39%), Gaps = 24/236 (10%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSHGFILHKGEKISKSL 307
           ++P D ++ G +    H IY   +           N     ++F+ G ++  G K+SKS 
Sbjct: 540 WFPIDQYIGGVEHAILHLIYSRYWTKVMRDLGLIENDEPATRLFTQGMVIKNGAKMSKSK 599

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN++ P E+I + G DA R + +      +D  + +DG+     +     +  L ++   
Sbjct: 600 GNIVSPDEMIAKYGADATRMYALFAAPPDRDLEWQEDGVAGI--SRFLARVYRLTTKYAP 657

Query: 368 MILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVS 422
            I         T      A T     +L    + + +I  +   +   +  +A V++L++
Sbjct: 658 AIAAHEKREKKTHAGSFAALTPEGMKLLRKLHQTIAKITLDFSGRWHFNTCIASVMTLMN 717

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           E+           L         T      EV R L +LL  F P L+ +++ +L 
Sbjct: 718 EI------SASEALMDGGAIAVETQT----EVFRVLTLLLAPFAPFLSQELWGLLG 763


>gi|307129160|ref|YP_003881176.1| valyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306526689|gb|ADM96619.1| valyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 952

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 75/416 (18%), Positives = 137/416 (32%), Gaps = 90/416 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDNGKVYVGRDEAEVRRDNNLSADVALHQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                KA   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPELKAFH-PSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFHTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D      G
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFTGGG 667

Query: 382 A--FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D  IL+  +R ++  RE +       A   +         D Y +  KP  + 
Sbjct: 668 EKVLSLADRWILAEFNRTVKTYREALDGYRFDLAANVLYEFTWNQFCDWYLELTKP-VMT 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSL 489
             +        +  V V+  L  L    +P +   I+  +     V D+    Q  
Sbjct: 727 GGSDAELRGTRHTLVTVLEALLRLAHPIIPFITETIWQRVKVLKGVTDDTIMLQPF 782



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFSIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPL 204


>gi|197284333|ref|YP_002150205.1| leucyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693169|sp|B4EV14|SYL_PROMH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194681820|emb|CAR41076.1| leucyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +     L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENINYMKGQLKKLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++  E+   ++           G     D++ S  T       PD    + YV + A 
Sbjct: 207 DTLDEWPEQVKTMQRNWIGRSEGVEITFDVADSDDTMTVYTTRPDTFMGVTYVAVAAG 264



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 86/229 (37%), Gaps = 27/229 (11%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKV----FSHGFILHKG-EKISKSLGNVIDPI 314
            +  G+D  R      PA  +       + +     +   + + G  K+SKS  N IDP 
Sbjct: 574 FYYTGEDGARHWVS--PAEAIVERDEKNRIIKATDSAGHELTYAGMSKMSKSKNNGIDPQ 631

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            ++E  G D +R F++          + +  ++       AN     + R V    +   
Sbjct: 632 TMVERYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFLRRLWRLVHEHTEKGT 685

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
                    T   + +     + + ++ +++ +    + A+A ++ L++++ R      P
Sbjct: 686 TQSLDLATLTTEQKDLRRDLHKTIAKVSDDVGRRLAFNTAIAAIMELMNKLTR-----AP 740

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              ++T  DRA     +  E +  +  +L   +P     ++  L   ++
Sbjct: 741 ---QETEQDRA-----LMQEALEAVVRMLSPIIPHACFVMWQALGGKED 781


>gi|170025236|ref|YP_001721741.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688389|sp|B1JGA5|SYL_YERPY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169751770|gb|ACA69288.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G   + D+  S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVDIIFDVVDSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                 + TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LMQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|205351935|ref|YP_002225736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|238690483|sp|B5R7Z6|SYL_SALG2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|205271716|emb|CAR36548.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    KK+   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKKLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDVGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|204930627|ref|ZP_03221557.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204320561|gb|EDZ05764.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322613219|gb|EFY10162.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621287|gb|EFY18144.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623707|gb|EFY20545.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628979|gb|EFY25758.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631701|gb|EFY28455.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637563|gb|EFY34265.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641903|gb|EFY38533.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646747|gb|EFY43253.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322651448|gb|EFY47828.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653101|gb|EFY49435.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658821|gb|EFY55076.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664909|gb|EFY61102.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668911|gb|EFY65063.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322670583|gb|EFY66716.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675324|gb|EFY71400.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322682205|gb|EFY78230.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684966|gb|EFY80963.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323193976|gb|EFZ79178.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197932|gb|EFZ83054.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202021|gb|EFZ87081.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207154|gb|EFZ92107.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213969|gb|EFZ98736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214319|gb|EFZ99070.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219276|gb|EGA03767.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225513|gb|EGA09743.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323231072|gb|EGA15188.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234096|gb|EGA18185.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238209|gb|EGA22267.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242557|gb|EGA26581.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248466|gb|EGA32400.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251319|gb|EGA35191.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323259247|gb|EGA42890.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261654|gb|EGA45229.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264836|gb|EGA48337.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272327|gb|EGA55734.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 860

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|56708082|ref|YP_169978.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670553|ref|YP_667110.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370567|ref|ZP_04986572.1| leucine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|60390664|sp|Q5NG64|SYL_FRATT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123359478|sp|Q14HL6|SYL_FRAT1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56604574|emb|CAG45623.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320886|emb|CAL09006.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568810|gb|EDN34464.1| leucine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|282159282|gb|ADA78673.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 813

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREITTCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
                +   ++           GL
Sbjct: 206 NKLDNWPEAVKTMQINWIGKSKGL 229



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 76/483 (15%), Positives = 148/483 (30%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISAETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYNIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVALTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKV 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +++ ++ Y + 
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
            +                 V VE    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 699 SE----------------SVKVEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|312793434|ref|YP_004026357.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180574|gb|ADQ40744.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 817

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y+
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    E    +++V  G          + V   + E +FFR++ Y ++LL   E
Sbjct: 150 KRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRDIE 205

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 206 KLDGWPEKVKIMQKNWIGRSEG 227



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/451 (14%), Positives = 149/451 (33%), Gaps = 41/451 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + +   + +     +  ++     E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLPIKVVIKGEGVDIENLQSAYEDEGVLINSGIFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +   + K            A             Q Y     P+ + +E G        
Sbjct: 390 LKNTDAMKKITQHLEQKGVGRACVTYKLRDWLISRQRYWGAPIPIVYCDECGIVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y               E           ++ +        K   D         
Sbjct: 450 LPVLLPYNVEFKPTGQSPLSYCEEF---------VNTTCPKCGKPAKRETDTMDTFICSS 500

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----LLSANLPL- 286
                Y          + S   +W P D ++ G +    H +Y   F         +P  
Sbjct: 501 WYYFRYTDPKNSQKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFE 560

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   
Sbjct: 561 EPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQ 620

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++        N +  L     S +  +      +    +E D+ +    +  ++++ E+
Sbjct: 621 GVEGCFR--FLNRLWRLYIELKSKLADE------SLLGESELDDELKYRLNYTIKKVTED 672

Query: 405 M-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    + A++ ++ L++ +  Y   ++  +L K           + ++ +R L IL+ 
Sbjct: 673 IGERFNFNTAISTIMELLNFLYEY---KEKGKLNKD----------LIIDTLRNLLILIY 719

Query: 464 AFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
            F P +A ++++I+   +  E   +   D+ 
Sbjct: 720 PFTPHIACELWEIMGFGEDIEEVSWPQYDEA 750


>gi|288941820|ref|YP_003444060.1| valyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897192|gb|ADC63028.1| valyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 947

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 67/406 (16%), Positives = 132/406 (32%), Gaps = 79/406 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                   +     ++    + ++ R++   +  ++  E+     +P   +N    +++ 
Sbjct: 360 HRLQQPCGDRSGAVIEPYLTDQWYVRVAPLAEPAIAAVENGDIRFVPDNWKNTYFEWMR- 418

Query: 203 GLKDLSLSRKTFDWG--IKIPDD----------------------------PQYIMYVWI 232
            ++D  +SR+   WG  I    D                             + ++  W 
Sbjct: 419 NIQDWCISRQ-IWWGHRIPAWYDSEGNVYVGRSEDEVRAKHGFGPEVTLRQDEDVLDTWF 477

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ ++ +  K  F+P  + V G DI+ F    +         ++P  +  
Sbjct: 478 SSALWPFSTLGWPEDTERLKT-FYPTSVLVTGFDIIFFWVARMIMMGLKFMGDVPFREVY 536

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEE------------------------------- 319
                    G+K+SKS GNV+DPI++I+                                
Sbjct: 537 IHGLVRDKNGDKMSKSKGNVLDPIDLIDGIDLESLVEKRTKGMMQPHLAEKITRDTRKDF 596

Query: 320 ------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+        G+D  +D    +     +  N + N  SR V M  +  
Sbjct: 597 PDGIPAFGTDALRFTFAALATTGRDIKFDLQRTEG--YRNFCNKLWN-ASRYVLMNTEGQ 653

Query: 374 DG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDA 430
           D      P   + +D  I +   R +  + E++       A   +         D Y + 
Sbjct: 654 DCGRGSEPVELSAADRWIRAELDRTIGTVTESIDAYRFDLAAQALYDFTWNEFCDWYLEL 713

Query: 431 QKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            KP      + D A        V  +  L  L    +P +  +I+ 
Sbjct: 714 SKPVLTGAQSSDAAKRGTRRTLVRTLETLLRLAHPIMPFITEEIWQ 759



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 21/172 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+HR+ G   L+  GTD  G       +    
Sbjct: 38  CIMIPPPNVTGSLHMGHAFQDTIMDALTRYHRMKGEQTLWQAGTDHAGIATQMVVERLIE 97

Query: 68  TT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
                               +  ++          +  S D      T ++   +  R +
Sbjct: 98  AEGQTRHDYGRDAFIERIWEWKAESGGAITRQLRRMGASLDWAHERFTMDEGLSEAVREV 157

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWM 160
           + ++ ++G IY+G     +        +D EV    + G  +  ++  VQ  
Sbjct: 158 FVRLYEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEESGFMWEMRYPIVQPP 209


>gi|167550814|ref|ZP_02344570.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168231663|ref|ZP_02656721.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168240497|ref|ZP_02665429.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168820229|ref|ZP_02832229.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194446717|ref|YP_002039891.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194451728|ref|YP_002044682.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194468874|ref|ZP_03074858.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197250962|ref|YP_002145624.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|200390690|ref|ZP_03217301.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|224582484|ref|YP_002636282.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238911599|ref|ZP_04655436.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|238690007|sp|B5EZ89|SYL_SALA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690244|sp|B4TB51|SYL_SALHS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693559|sp|B4SYK7|SYL_SALNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782512|sp|C0PW78|SYL_SALPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194405380|gb|ACF65602.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194410032|gb|ACF70251.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194455238|gb|EDX44077.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197214665|gb|ACH52062.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|199603135|gb|EDZ01681.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205324136|gb|EDZ11975.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205334016|gb|EDZ20780.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205340156|gb|EDZ26920.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205343170|gb|EDZ29934.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|224467011|gb|ACN44841.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320084918|emb|CBY94708.1| Leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 860

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|189083235|sp|Q57RS7|SYL_SALCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|295096606|emb|CBK85696.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 860

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDNLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 97/309 (31%), Gaps = 74/309 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPQYKEGMLDSDAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGLVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAKDAEGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A +E  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 677 VYEHTSQGDAPALNVAALSEDQQALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P ++  ++  L      +
Sbjct: 735 ----------KLAKA-PQDGEQDRALMREALLAVVRMLNPFTPHVSFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQ 491
           N  +   D+
Sbjct: 784 NAPWPVADE 792


>gi|242398951|ref|YP_002994375.1| Valyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265344|gb|ACS90026.1| Valyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 886

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 129/344 (37%), Gaps = 14/344 (4%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E  +      +    +  + M+ +    R   +   +  +       I+P    +  + 
Sbjct: 371 SEQIRWYPPDMFLRLKDWAESMDWDWVISRQRVFGTPIPFWVCKDCGEIIPAREEDLPVD 430

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
              +G    +   K    G    +  + ++  W+D+    L  + +  +     +  +P 
Sbjct: 431 PRFNG----APVDKCPKCGSTNLEGVKDVLDCWVDSSITPLVISKWQKDEKW-FSHNFPT 485

Query: 259 DLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            L   G DI+R    Y  +  ++L+   P    + +       G K+SKS GNV+ P EV
Sbjct: 486 SLRPQGTDIIRTWGFYTIFRTYILTGEKPWDDILINGMVAGPDGRKMSKSYGNVVSPEEV 545

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I + G DALR +       G+D  +  + +    N      + N + R     +KD+D  
Sbjct: 546 IPKYGADALRLWTALA-PPGEDHPFKWEIVD--YNYRFLQKLWN-IFRFAERHIKDFDYE 601

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
                     D+ ILS   R+++   E ++    +    ++++ V     D Y +  K  
Sbjct: 602 EYKDIELEPLDKWILSRLHRLIKFATEELEKYRFNLLTRELMTFVWHEVADDYIEMIKH- 660

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L   + +       V  E++  + +LL    P +  +++  +F
Sbjct: 661 RLYGEDEESKLKAKMVLYELLYNITLLLGPLAPHITEELYQEMF 704



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 84/275 (30%), Gaps = 29/275 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  EKRPAYSIDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMRGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNA-----------GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRI 108
            +                   +  Q     R+    +  S D      T +  +    + 
Sbjct: 91  VEKEFGISKDQPEEFLKKCIEWTWQAIEAMRNQFIRIGYSADWELEYHTMDDEYKALVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
              +   KG +Y+  +  ++  R +      EV    +  Y      P+   E+      
Sbjct: 151 SLLEFYKKGLLYQDKHPVYWCPRCKTSLAKAEVGYVEEDGYLYYIKLPIAGEEDYIPIAT 210

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                         HPE       +N+V   VK  + +           + I  D     
Sbjct: 211 TRPELMPACVAVFVHPED---ERYKNKVGKKVKLPIFERE---------VPIIADED--- 255

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
            V  +  T  +    Y D  D    K +   + + 
Sbjct: 256 -VDPEFGTGAVYNCTYGDEQDVLWQKRYNLPVIIT 289


>gi|261405682|ref|YP_003241923.1| isoleucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282145|gb|ACX64116.1| isoleucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 1029

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 149/414 (35%), Gaps = 22/414 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL--RDEAYYNDDEVYKGA----DGQYYNA 152
            K  ++       +       Y        +   +D+   N++EV        +G++   
Sbjct: 375 SKEKYEHSYPFCWRCKSPLLYYAMESWFIETTAVKDQLIANNNEVTWYPGHVREGRFGKF 434

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKD 206
             + V W      ++          S         +   R N      E +   K  + +
Sbjct: 435 LEDLVDWNISRNRYWGTPLNVWVCDSCEGQFSPHSIAELRANAVGEMAEDLELHKPYVDE 494

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           + +     + G+   +    ++ VW D+ +       Y         + +PAD+   G D
Sbjct: 495 VKVKCPHCEGGV--MERTSEVIDVWFDSGSMPYAQYHYPFEDKEKFEQQYPADMICEGID 552

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+++   + L +   P    + +   +   G+K+SKS GNVIDP E+IEE G DA
Sbjct: 553 QTRGWFYSLLAVSTLFTGKAPYKAVMATGHILDENGQKMSKSKGNVIDPWEIIEEYGTDA 612

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGMIPT-PGA 382
            R+ L+ + A      + K G+     + + + + N  +  ++   +  YD       G+
Sbjct: 613 FRWALLADSAPWNSKRFSK-GIVGEAKSKVVDTLVNTHAFLTLYAGIDGYDPKEHDFKGS 671

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNP 441
             + D  ILS  + ++Q + + +       A   + + V E+ + Y    +         
Sbjct: 672 NHKLDRWILSRLNSLIQVVDKGLAVNDFLNAAKAIEAYVDELSNWYIRRSRDRFWGSGLG 731

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           +           V+  L+ L+  F P L+  IF  L   +      F   D+ L
Sbjct: 732 EDKLAAYGTLTHVLLTLSKLMAPFTPMLSEDIFVNLGGGESVHLADFPQADEAL 785



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +            N  PHIGH    +I D + R+  + G  V+   G D HG  +    
Sbjct: 36  GKPNYVFYEGPPTANGAPHIGHVLGRVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K  V +    +R++ + +      D    T E  + 
Sbjct: 96  EKQLGISGKQEIENYGVEAFIKKCKASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   +   I DKG +Y+G     Y    +   +  EV +G +
Sbjct: 156 ESVWNILATIHDKGLLYRGHRVSPYCPCCQTTLSSHEVAQGYE 198


>gi|56414217|ref|YP_151292.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363140|ref|YP_002142777.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81821581|sp|Q5PM88|SYL_SALPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238689935|sp|B5BCE6|SYL_SALPK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56128474|gb|AAV77980.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094617|emb|CAR60139.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 860

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|229529949|ref|ZP_04419339.1| leucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333723|gb|EEN99209.1| leucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 878

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 51  SKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 111 VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 171 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 226

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 227 DNLDGWPEMVKTMQRNWIGRSEG 249



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 76/318 (23%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 513 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 572

Query: 280 LSANLPLPKKVF-------SHGFILHKG-------------------------------- 300
           + ++ P  K +        +  +   KG                                
Sbjct: 573 VKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVERDGKGRIVSAVDATGRQVE 632

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+SKS  N IDP E++++ G D +R F++          + + G++       AN
Sbjct: 633 HSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------AN 686

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALA 415
                V + V    +          A     +++     + + ++ +++  +   + A+A
Sbjct: 687 RFLRRVWKLVREHTELGQAPALDASALNADQKALRRDVHKTIAKVTDDVARRQTFNTAIA 746

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L++++ +      P        DRA     +  E ++ + ++L    P +  +++ 
Sbjct: 747 AIMELMNKLTK-----AP---MTEAQDRA-----ILDEALKAITLMLYPITPHICFEMWV 793

Query: 476 ILFVAD-ENRCFQSLDQR 492
            L  ++ +   + + D+ 
Sbjct: 794 ALGQSNIDTASWPTYDEA 811


>gi|227358523|ref|ZP_03842848.1| leucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227161234|gb|EEI46308.1| leucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 860

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +     L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENINYMKGQLKKLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++  E+   ++           G     D++ S  T       PD    + YV + A 
Sbjct: 207 DTLDEWPEQVKTMQRNWIGRSEGVEITFDVADSDDTMTVYTTRPDTFMGVTYVAVAAG 264



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 86/229 (37%), Gaps = 27/229 (11%)

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKV----FSHGFILHKG-EKISKSLGNVIDPI 314
            +  G+D  R      PA  +       + +     +   + + G  K+SKS  N IDP 
Sbjct: 574 FYYTGEDGARHWVS--PAEAIVERDEKNRIIKATDSAGHELTYAGMSKMSKSKNNGIDPQ 631

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            ++E  G D +R F++          + +  ++       AN     + R V    +   
Sbjct: 632 TMVERYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFLRRLWRLVHEHTEKGT 685

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
                    T   + +     + + ++ +++ +    + A+A ++ L++++ R      P
Sbjct: 686 TQSLDLATLTTEQKDLRRDLHKTIAKVSDDVGRRLAFNTAIAAIMELMNKLTR-----AP 740

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              ++T  DRA     +  E +  +  +L   +P     ++  L   ++
Sbjct: 741 ---QETEQDRA-----LMQEALEAVVRMLSPIIPHACFVMWQALGGKED 781


>gi|21230121|ref|NP_636038.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769888|ref|YP_244650.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81304158|sp|Q4UQP3|SYV_XANC8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81796534|sp|Q8PCR7|SYV_XANCP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21111650|gb|AAM39962.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575220|gb|AAY50630.1| valyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 944

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 74/416 (17%), Positives = 136/416 (32%), Gaps = 89/416 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQVKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDEAGKCYVGHDEAQVRATHGLGAEVALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
                    A++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 AQAMDERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEDLVAKRTSGLMQPRMAEKIEKATRKEFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +    L + +G   +  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFALMNTEGAQFSGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE++  IL+    V  E + +  N         +         D + +  KP  L    
Sbjct: 664 QTETERWILARLDAVAAEAQAHYANYRFDLLAQTLYEFAWNAFCDWFVELAKP-ALNGAV 722

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQR 492
            D A +  +  + V+  L  LL    P +  +++      L +  +    Q+  QR
Sbjct: 723 QDAADSTRHTLLYVLEALLRLLHPLTPFVTEELWQQVAPRLGITGDTISLQAFPQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDTLGREGFIAKVWEWKAQSGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVTEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|16764025|ref|NP_459640.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167990657|ref|ZP_02571757.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|197265929|ref|ZP_03166003.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198242815|ref|YP_002214637.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|29337028|sp|Q8ZQZ6|SYL_SALTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690336|sp|B5FMP4|SYL_SALDC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16419160|gb|AAL19599.1| leucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197244184|gb|EDY26804.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937331|gb|ACH74664.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205330857|gb|EDZ17621.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261245921|emb|CBG23722.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|301157249|emb|CBW16736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911680|dbj|BAJ35654.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321226229|gb|EFX51280.1| Leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
          Length = 860

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|326935721|ref|XP_003213916.1| PREDICTED: methionyl-tRNA synthetase, cytoplasmic-like, partial
           [Meleagris gallopavo]
          Length = 416

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 101/284 (35%), Gaps = 30/284 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++    + I++A+ Y N  PH+G+    ++ AD  AR+ RL   + L+  GTDE+G    
Sbjct: 13  VEGMRNVLITSALPYVNNVPHLGNIIGCVLSADAFARYCRLRNWNTLYVCGTDEYGTATE 72

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    DIS+D F RTT  +     + +++++  +G +
Sbjct: 73  TKAVEEGLTPRQICDKYHAVHADIYRWFDISFDCFGRTTTPQQTAISQDIFQRLQARGFV 132

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +      +    + +  D  V            +G          N V+          
Sbjct: 133 LQDTVQQLHCAGCQRFLADRFVEGICPFCAYQEARGDQCDKCGKLINAVELKTPRCKLCG 192

Query: 169 LSAY---------------QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            S                 +                   R    S+++ GL+   ++R  
Sbjct: 193 GSPAVRPTRHLFLDLPKLEERLQPWLENCWATGNWTANARYITRSWIRDGLRPRCITRD- 251

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             WG  +P D     + YVW DA   YL+ T           K 
Sbjct: 252 LQWGTPVPLDGFRDKVFYVWFDAPIGYLSITANYTEHWERWWKN 295


>gi|134301894|ref|YP_001121863.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166231609|sp|A4IXU1|SYL_FRATW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134049671|gb|ABO46742.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 813

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
                +   ++           GL
Sbjct: 206 NKLDNWPEAVKTMQINWIGKSKGL 229



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 74/472 (15%), Positives = 143/472 (30%), Gaps = 60/472 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISAETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYNIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVALTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKV 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +++ ++ Y + 
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +                 V VE    L  +L  F P L + ++  L + ++
Sbjct: 699 SE----------------SVKVEGFSILLRILAPFTPHLCHYLWQQLNLGED 734


>gi|284007685|emb|CBA73427.1| valyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 965

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R      + ++  +      +P +  N +       ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVRTLPLAKQAIAAVKEGRIQFVPKQYEN-MYFSWMQDIQDWCISRQ-LWW 445

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDESGNVYVGHDEDEVRRENNLSADISLHQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 506 NSEALKTFH-PTDVLVSGFDIIFFWIARMIMLTMYFIKDENGQGQIPFKTVYMTGLIRDE 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+KISKS GNVIDP+++I+ +                                     G
Sbjct: 565 EGQKISKSKGNVIDPLDMIDGISLEDLVTKRTGNMMQPHLAEKIAKRTRKEYPQGIKAHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRL--TGYRNFCNKLWN-ASRYVLMNTEGQDCGQQGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I++  ++ ++  RE + +     A   +         D Y +  KP  + K
Sbjct: 682 MIFSLADRWIMAEFNQTVKLYREALDSYRFDIAANILYEFTWNQFCDWYLELSKP-AIHK 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            N        Y  +E++  L  L    +P +   I+  + V
Sbjct: 741 GNEAEIRATRYTLIEILESLLRLAHPIIPFITETIWQRVKV 781



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 57/176 (32%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GHA++  I D L R+ R+ G + L+ +GTD  G       
Sbjct: 45  SKQSFCIVIPPPNVTGNLHMGHAFQQTIMDTLIRYQRMQGKNTLWQSGTDHAGIATQMVV 104

Query: 63  QNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKR 101
           +      +                           S+  R + D +D   + F  T +K 
Sbjct: 105 ERKISAEENKTRHDYGREAFIEKIWQWKAESGGNISQQMRRLGDSVDWQRERF--TMDKG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                +  + ++     IY+G     +  +     +D EV       +      P+
Sbjct: 163 LSKAVKEAFIRLYQDDLIYRGKRLVNWDPKLHTAISDLEVENREVNGFMWHLRYPL 218


>gi|332158573|ref|YP_004423852.1| valyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034036|gb|AEC51848.1| valyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 891

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y     +
Sbjct: 453 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 VLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALA-PPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD++            D  ILS   R++
Sbjct: 572 HPFKWEIVD--YNFRFLQKVWN-IYRFAERHIKDFEYEKYKDIELEPLDRWILSRLHRII 628

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++++ +     D Y +  K + +   + +          E++ 
Sbjct: 629 KFATEELERYRFNLITRELMTFIWHEVADDYIEMVK-YRIYGDDEESKLKARVTLYELLY 687

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +++  +F
Sbjct: 688 NIMLLLAPFVPHITEELYQNIF 709



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  ENKPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +     TK            +  Q  +  R+    +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGITKDQPEEFLKKCIEWTWQAIKAMREQFIRIGYSADWDLEYHTMDDWYKAAVQR 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +   KG IY+  +  ++  R        EV  
Sbjct: 151 SLLEFYKKGLIYREEHPVYWCPRCRTSLAKAEVGY 185


>gi|327481783|gb|AEA85093.1| valyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 944

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 130/394 (32%), Gaps = 77/394 (19%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +K ++  ES     +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEKAIAAVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                             + ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
               +  K    P D+ V G DI+ F    +   +  L+  +P             +G+K
Sbjct: 487 PQQTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLSTHLTGQIPFKTVYVHGLVRDGQGQK 545

Query: 303 ISKSLGNVIDPIEVIE-------------------------------------EVGVDAL 325
           +SKS GNV+DP+++++                                       G DAL
Sbjct: 546 MSKSKGNVLDPLDIVDGITLDELLTKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDAL 605

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+      + G+D  +D   ++     +  N I N  +           G+   P   + 
Sbjct: 606 RFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAANFVFENTEGKDTGVNGEPVELSS 663

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-D 442
            D  I+S   R   E+   ++      A   +   + +     Y +  KP    +T   +
Sbjct: 664 VDRWIISALQRTEAEVTRQLEAFRFDLAAQALYEFIWDEYCAWYLELVKPLLWDETASVE 723

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R        V V+     L   F+P +  +I+  
Sbjct: 724 RQRGTRRTLVRVLETALRLAHPFMPFITEEIWQR 757



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E   I           H+GH +   I D L R+ R+ G + L+  GTD  G         
Sbjct: 31  EPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRWRRMQGRNTLWQPGTDHAGIATQMVVER 90

Query: 60  --------------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHD 104
                         +         K     N  R  R +   +D S + F  T +    +
Sbjct: 91  QLAAQGTSRHDLGREKFLEKVWQWKEESGGNITRQIRRLGSSVDWSRERF--TMDDGLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 149 AVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|147677174|ref|YP_001211389.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083135|sp|A5D416|SYL_PELTS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146273271|dbj|BAF59020.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 827

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 7/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            +R K Y      YP+ + H+GH     I DV+ARF  + G  VL   G D  G      
Sbjct: 30  SDRPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQGYHVLHPMGWDAFGLPAENA 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           A ++ GV    +   N  + R     L ISYD    + T    ++   + L+ ++   G 
Sbjct: 90  AIKHGGVHPAEWTLDNIESMRAQLKQLGISYDWNREVATCHPGYYRWTQWLFLQLFHNGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +         +++V  G           PV+  E E +FF+++ Y ++LL 
Sbjct: 150 AYKKKAAVNWCPGCATVLANEQVKDG----GCERCKAPVEKRELEQWFFKITDYAERLLK 205

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             E    +   ++   E       G
Sbjct: 206 DLELLEGWPEKVKIMQENWIGRSEG 230



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 108/271 (39%), Gaps = 33/271 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D +K  +W P D ++ G +    H +Y   
Sbjct: 492 KRETDTMDTFMCSSWYYYRYTSPRDNDAPWDRNKVDYWLPVDQYIGGVEHAILHLLYSRF 551

Query: 278 F-------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           F        L +NL     + + G +L  G K+SKS GNV+ P +++   G D  R F++
Sbjct: 552 FTKVLYDLKLVSNLEPFSNLLTQGMVLKDGAKMSKSRGNVVSPEDIVARYGADTARLFIL 611

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT----ES 386
                 +D  +   G++         G    ++R   +++     +   P A +     +
Sbjct: 612 FAAPPERDLEWSDQGVE---------GCYRFLNRVWRLVMPLAGLLKEAPAAVSGKLVGA 662

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +  +  V    ++++ E++      + A++ ++ LV+ + ++       E+ +++ +   
Sbjct: 663 NREMRRVTHSTIKKVTEDISARFNFNTAVSAIMELVNALYQF------REIPESDRN--- 713

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               V  E +  L +LL  F P +  ++++ 
Sbjct: 714 --PAVLREAVESLLLLLAPFAPHITEELWEA 742


>gi|38234357|ref|NP_940124.1| valyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401320|sp|Q6NFV0|SYV_CORDI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|38200620|emb|CAE50316.1| valyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 919

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 123/373 (32%), Gaps = 58/373 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++                 I P         +V   + D  +SR+   
Sbjct: 376 PIEPRLSLQWWVKVEKLATMAGDAIREGDTVIHPKSSEPRYFDWVDD-MHDWCISRQ-LW 433

Query: 216 WG--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNP 248
           WG  I I   P+                          ++  W  +     +T G+ D  
Sbjct: 434 WGHRIPIWYGPEDAEGNRDIVCVGPDEQPPAGYEQDPDVLDTWFSSALWPFSTMGWPDKT 493

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPK----------KVFSHGFIL- 297
                KF+P  + V   DIL F       F   A    P+          ++  +   L 
Sbjct: 494 P-ELDKFYPTSVLVTAYDILFFWVARMMMFGTLAGETTPEILGQGTDGRPQIPFNDLFLH 552

Query: 298 -----HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                 +G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N 
Sbjct: 553 GLVRDEQGRKMSKSLGNGIDPMDWVERFGADALRFTLARGANPGVDLPVGEDSAQSSRN- 611

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             A  + N  ++   M   +   + P     T++D  IL     V   + +        +
Sbjct: 612 -FATKLFN-ATKFALMNGAEVGTL-PERSELTDADRWILDRLEEVRVSVDDYFDRYQFAK 668

Query: 413 ALAQVISLVS--EVDRYFDAQK---PWELK---KTNPDRASTVLYVTVEVIRQLAILLQA 464
               +         D Y +  K   P +++        R      V  +V+  L  +L  
Sbjct: 669 GNEALYQFAWGEFCDWYLEIAKVQIPRDMEAASAQEQARGRNTQIVLGQVLDALLRMLHP 728

Query: 465 FVPKLANKIFDIL 477
            +P +   ++  L
Sbjct: 729 AMPFVTEVLWKAL 741



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         Q H+GHA +  + D +AR  R+ G +VL+  G D  G      
Sbjct: 54  SSKPAFSIVLPPPNVTGQLHMGHALDHTLMDGIARRKRMQGYEVLWLPGMDHAGIATQTK 113

Query: 62  AQNA----------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +              + + F++                 R + D +D S + F  T ++
Sbjct: 114 VEAMLKETEGKSRWDYSREEFIEHVWEWKRKFGGTIGTQMRAIGDSVDWSRERF--TLDE 171

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 172 GLSRAVQTIFKQMYDRGMIYQANRLVNWSPILETAVSDIEVVY 214


>gi|296115214|ref|ZP_06833855.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978315|gb|EFG85052.1| valyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 898

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/370 (16%), Positives = 128/370 (34%), Gaps = 42/370 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      ++   +      +   E+     +P +  N   ++++  ++   +SR+   W
Sbjct: 368 VEPRLTTQWYCDAATLAAPAIEAVETGRVEFVPRQWENTFFAWMRD-IQPWCISRQ-LWW 425

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 426 GHRIPAWYGPDGHVFVAHDEADATTQARAHYGRDEVLTRDDDVLDTWFSSALWPFSTLGW 485

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            D      A+++P D+ V G DI+ F    +         ++P  K          +G+K
Sbjct: 486 PDQTP-ELARYYPTDVLVTGFDIIFFWVARMMMMGLHFMKDVPFRKVFIHGLVRDERGQK 544

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN IDP+E+I+  G DA+R+ +      G+D    +  +++         + N  
Sbjct: 545 MSKSKGNGIDPLEMIDTYGADAMRFTICALTGLGRDVKLGRKKVEE--YRSFTTKLWNAA 602

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                  +    G  P     +     +L+   R + +    +++             V 
Sbjct: 603 RFCEMNRVAPVAGFDPV-TVTSPLGRWLLAEAGRAITDATAALESFRFDEYAGVCYRFVW 661

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D + +  KP    + +   A+    VT  V+  +  LLQ  +P + ++++      
Sbjct: 662 NCFCDWFLEFAKPVFNTEGDTAEATETRAVTAHVLGLILRLLQPVMPFITDELWHRFGYG 721

Query: 481 DENRCFQSLD 490
            +    Q+  
Sbjct: 722 AQGSLMQAAW 731



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 56/169 (33%), Gaps = 20/169 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAAQ 63
           +  I  PN     H+GHA  M + D L R+ R+ G DVL+  GTD  G      + +  Q
Sbjct: 37  TIMIPPPNVTGTLHVGHALTMTLQDTLIRWRRMQGRDVLWQPGTDHAGIATQLVVERMLQ 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--------------LDISYDDFIRTTEKRHHDTCRIL 109
             G + +    +                           + +     T ++      R +
Sbjct: 97  KEGTSRQELGREAFEKRVWDWKAQSGGGITTQLRRLGSSLDWPRERFTMDEGLSKAVREV 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +  +  +G IY+      +     +  +D EV              PV+
Sbjct: 157 FVTLYREGLIYRDRRLVNWDPAFRSAISDLEVDNKEMRGSLWYIRYPVE 205


>gi|189425175|ref|YP_001952352.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421434|gb|ACD95832.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 825

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y+     YP+ + H+GH     I DV+ RF R+ G +VL   G D  G     AA
Sbjct: 33  SRKKYYLLEMFPYPSGRIHMGHVRNYSIGDVVGRFKRMRGFNVLHPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    RD    + +SY  D  + T +  ++   + L+ ++  +G  Y
Sbjct: 93  IKNNCHPAAWTYENMAYMRDQLKQMGLSYDWDRELATCDVSYYRWEQKLFLEMYKRGIAY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    E    +++V  G            V   E E +FF+++ Y ++LL + 
Sbjct: 153 KKQSFVNWCPSCETVLANEQVEDG----GCWRCDTEVVQKELEQWFFKITDYAEELLDFT 208

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
              P +   +           +G
Sbjct: 209 NKLPGWPERVLVMQRNWIGKSTG 231



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 130/364 (35%), Gaps = 48/364 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + +  G           +L                 E  + V  
Sbjct: 425 WGVSRQRYWGSPIPIIYCDCCGVVPVPDKDLPVVLPRDVHFTGEGGSPLATLESFTKVDC 484

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
            L      R+T         D              Y          D ++A++W   D +
Sbjct: 485 PLCGKPARRET---------DTMDTFVESSWYFLRYCCPDFEDGMLDKARAQYWMSVDQY 535

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   F            + P    + + G ++  G K+SKS GNV+DP
Sbjct: 536 IGGIEHAVLHLLYARFFTKVMRDLGYVDVDEPFT-NLLTQGMVIKDGAKMSKSKGNVVDP 594

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +I+  G D  R F +      KD  +++ G+         +G    ++R   ++ +  
Sbjct: 595 DALIKRYGADTARLFSLFAAPPEKDLDWNEQGV---------DGCYRFLNRVWKLVHEQL 645

Query: 374 DGMIP----TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYF 428
           + +       P A ++ + ++     + L+++ E++ +    + A+A V+ L++ +    
Sbjct: 646 EAVAAAPALDPSALSDEERTLRRAVHKTLKKVTEDIDERFHFNTAIAAVMELMNTLQG-- 703

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCF 486
                    + N  +A+ V+    E +  + I+L  FVP +  +++ +L          +
Sbjct: 704 --------ARLNTPQAAAVMK---EALELVVIMLAPFVPHITEELWQLLGHTTPLSATTW 752

Query: 487 QSLD 490
            + D
Sbjct: 753 PAWD 756


>gi|312622508|ref|YP_004024121.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202975|gb|ADQ46302.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 817

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     A
Sbjct: 28  SSKPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  
Sbjct: 88  AIKHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    E    +++V  G          + V   + E +FFR++ Y ++LL  
Sbjct: 148 YRKRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   +       G
Sbjct: 204 IEKLDGWPEKVKIMQKNWIGRSEG 227



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 68/447 (15%), Positives = 155/447 (34%), Gaps = 55/447 (12%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + + + + +     I  ++     E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLSIKVVIKGEGIDIENLQSAYEDEGVLINSGIFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +++K  + K            A             Q Y     P+ + EE G        
Sbjct: 390 LNNKEAMKKITQYLEQKGVGRACVTYKLRDWLISRQRYWGAPIPIVYCEECGIVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y                 + F  +G   LS   +  +        P       +
Sbjct: 450 LPVLLPY----------------NVEFKPTGQSPLSYCEEFVNTTCPKCGKPAKRETDTM 493

Query: 233 DALTNYLTTTGYLDNPDGSK--------AKFWPADLHVIGKDILRFHAIYWPAF----LL 280
           D             +P   K        + + P D ++ G +    H +Y   F      
Sbjct: 494 DTFICSSWYYFRYTDPKNDKKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYD 553

Query: 281 SANLPL---PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
              +P     K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +
Sbjct: 554 LGYVPFEEPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPER 613

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSR 396
           D  +   G++         G    ++R   + ++  + +        +E D+ +    + 
Sbjct: 614 DLEWSDQGVE---------GCFRFLNRLWRLYIELKNKLADDSLIGESELDDELRYRLNY 664

Query: 397 VLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ E++ +    + A++ ++ L++ +  Y   ++  +L K           +  + +
Sbjct: 665 TIKKVTEDIAERFNFNTAISTIMELLNFLYEY---KECGKLNKD----------LIKDTL 711

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
           R L IL+  F P +A ++++I+   ++
Sbjct: 712 RNLLILIYPFTPHIACELWEIMGYGND 738


>gi|209885212|ref|YP_002289069.1| valyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873408|gb|ACI93204.1| valyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 956

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 9/255 (3%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ D     K +++P  + V G DI+ F    +        
Sbjct: 492 DEDVLDTWFSSALWPFSTLGWPDTDKEVK-RYYPTSVLVTGFDIIFFWVARMMMMGLHFM 550

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P P           KG K+SKS GNVIDP+ +I+E G DALR+ L    A G+D   
Sbjct: 551 NDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALRFTLAAMAAQGRDIKL 610

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++     + A  + N  SR   M                  +  I    S    E+
Sbjct: 611 ATSRVEG--YRNFATKLWN-ASRFAEMNGCALAKGFDATRCKETLNRWIAHETSHATHEV 667

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E ++    + A   +   V     D Y +  KP  L   + +              ++ 
Sbjct: 668 TEAIRAYRFNDAAGAMYRFVWNVYCDWYLELAKP-VLLGPDSEAKRETQAAVAWARDEIL 726

Query: 460 ILLQAFVPKLANKIF 474
            LL  F+P +  +++
Sbjct: 727 KLLHPFMPYITEELW 741



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 23/178 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E   I           H+GHA    + D+L RF R+ G DVL+  GTD  G      
Sbjct: 33  REAEPFTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      K    +                          + +    D S + F  T ++
Sbjct: 93  VERQLAARKEPTRREMGREAFLDRVWQWKAESGDTIVNQLKRLGASCDWSRERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++  +  +G IYK      +  +     +D EV +     +      P +
Sbjct: 151 GLSRAVAKVFCTLYAEGLIYKDKRLVNWDPKLLTAISDLEVQQVEVKGHLWHLRYPYE 208


>gi|325264248|ref|ZP_08130979.1| isoleucine--tRNA ligase [Clostridium sp. D5]
 gi|324030319|gb|EGB91603.1| isoleucine--tRNA ligase [Clostridium sp. D5]
          Length = 1051

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/505 (12%), Positives = 157/505 (31%), Gaps = 36/505 (7%)

Query: 2   KEREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ 56
           + ++  Y++    Y          HI  A+    A+V           + F    DE G 
Sbjct: 306 QNKKAFYVTCDT-YVTLTDGTGIVHIAPAFGEDDANV------GRNYGLPFVQLVDEKGN 358

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
                         VFV +         +   + +D        +   +    W+  +  
Sbjct: 359 MSESTPFAG-----VFVKKADPMVLKDLEERGLLFD------APKFEHSYPHCWRCDTPL 407

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEEEGYFFRLS- 170
               +  +    +   +   +++            G++ +   N   W      ++    
Sbjct: 408 IYYARESWFINMTAVKDDLISNNNTINWIPENIGKGRFGDWLENVQDWGISRNRYWGTPL 467

Query: 171 -AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
             ++ +    +       L     N              ++ K    G ++   P+ ++ 
Sbjct: 468 NIWECECGHQHSIGSIEELKFMSDNCPDDIELHRPYIDDVTVKCPICGKEMHRVPE-VID 526

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLP 287
            W D+ +       Y         + +PAD      D     F+++   + LL    P  
Sbjct: 527 CWFDSGSMPFAQHHYPFENKDLFEQQFPADFISEAVDQTRGWFYSLLAISTLLFNKAPYK 586

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +         G+K+SKS GN +DP + +   G DA+R++     A      +    + 
Sbjct: 587 NVIVLGHVQDENGQKMSKSKGNAVDPFDALNLYGADAIRWYFYVNSAPWLPNRFHGKAVT 646

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENM 405
           +     +           +   + ++D           +  D+ +LS  + +++ + EN+
Sbjct: 647 EGQRKFMGTLWNTYAFFVLYANIDEFDATKYSLEYEKLSVMDKWLLSKLNTLIKTVDENL 706

Query: 406 QNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +N  I  +   +   V ++ + Y    +     K                +  +A +   
Sbjct: 707 ENYRIPESARALQDFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTVAKVAAP 766

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
            +P +  +I+  L  + ++   +S+
Sbjct: 767 MIPFMTEEIYQNLVCSIDSAALESI 791



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 65/194 (33%), Gaps = 26/194 (13%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M+ERE       Y        N +PHIGH    +I D++ R+  + G  V    G D HG
Sbjct: 32  MEEREGGPEYTFY--DGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYRVPRKAGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--R 96
             +    +                       K  V +    + D +  +    D      
Sbjct: 90  LPVELEVEKLLGLDGKDQIEEYGLEPFIDKCKESVWKYKGMWEDFSSTVGFWADMEHPYV 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T +    ++     K+I DKG +YKG     Y  R     +  EV +G       +    
Sbjct: 150 TYDNNFIESEWWGLKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVR 209

Query: 157 VQWMEEEGYFFRLS 170
            +  +E+ Y    +
Sbjct: 210 FKVKDEDAYILAWT 223


>gi|325980977|ref|YP_004293379.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530496|gb|ADZ25217.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 881

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+R+HR+ G +VL   G D  G     AA
Sbjct: 31  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMQGFNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V+   +   N    R     L   I ++  I T +  ++   + L+ ++ ++G  Y
Sbjct: 91  MQNTVSPAKWTYDNIAYMRKQLKSLGLSIDWEREITTCDPSYYHWNQWLFLRMLEQGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G           PV+  E   Y+ +++ Y D+LL+  
Sbjct: 151 QTTGTVNWDPIDQTVLANEQVIDG----CGWRTGAPVEKREIPMYYLKITQYADELLNAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLTGWPERVKTMQANWIGKSYG 229



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 18/181 (9%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N +DP  +++E G D  R F++      +   +   G+           +    
Sbjct: 640 MSKSKNNGVDPQNLVQEYGADTARLFMMFASPPTQTLEWADAGVDGAYR--FLKRLWRQA 697

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
              +   +   D  +    A +   + +       + ++ ++++ +   + A+A V+ L+
Sbjct: 698 YIHLQSGVVRIDPALHQ--ALSPELKDLRCQLHLTIAKVTDDLERRHTFNTAIAAVMELM 755

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + + +      P                +  E +  + +LL   VP + ++++  L    
Sbjct: 756 NGLVK-CQDNNP------------VSRNLMQEALENIVLLLSPIVPHICHELWHELRPGT 802

Query: 482 E 482
           E
Sbjct: 803 E 803


>gi|187931682|ref|YP_001891666.1| leucyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691565|sp|B2SGM9|SYL_FRATM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187712591|gb|ACD30888.1| leucyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 813

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
                +   ++           GL
Sbjct: 206 NKLDNWPEAVKTMQINWIGKSKGL 229



 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 74/482 (15%), Positives = 149/482 (30%), Gaps = 60/482 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISAETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYNIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDSLNFKNAYQAIKKYLTEQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVALTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++          + N    +  +  K
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG--TNKFLRKVFNYAELNKVIFAK 642

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +   +       T+ D+         L++   +      +  ++  + +++ ++ Y +  
Sbjct: 643 N---ITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNLS 699

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSL 489
           +                 V VE    L  +L  F P L + ++  L + ++  +  F ++
Sbjct: 700 E----------------SVKVEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPTV 743

Query: 490 DQ 491
           D 
Sbjct: 744 DN 745


>gi|126178353|ref|YP_001046318.1| isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166229750|sp|A3CSI6|SYI_METMJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125861147|gb|ABN56336.1| Isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 1059

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 142/414 (34%), Gaps = 44/414 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY- 172
              G  ++   S  Y    + +    E+ +         +   V+W  E     R   + 
Sbjct: 388 HRYGHCWRCKTSIIYRATAQWFLKATEIREPM-----LQEIAKVKWYPEWAGSARFHDFV 442

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------- 225
           +D           + +PI          ++ +  ++   +     +  P  P        
Sbjct: 443 RDSRDWCISRQRYWGIPIPIWQCEQCGERTVIGTIAELEERSGARVPDPHRPYVDEVVIP 502

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                       I  VW D+      T G+    + +  + WPAD    G+D     F++
Sbjct: 503 CSCGGEMHRVADIFDVWFDSAVASWATLGFPRERE-AFDRLWPADFITEGQDQTRGWFYS 561

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               + +     P    +     +   G K+SKS GNV+ P EV+ + GVD LR++++  
Sbjct: 562 QLGASTVAFGRAPYKSVLMHGFALDADGRKMSKSFGNVVTPEEVMNQFGVDVLRFYVLWA 621

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPG---------- 381
            A   D  ++ D +K        N + N+    +  M+L  ++      G          
Sbjct: 622 NAPWDDLKFNWDSVKTIHRT--LNILWNVYRFPLPYMVLDSFEPAAGDGGLWDGSFVRGN 679

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK 437
                E D  I+S  + + +    +MQ   +HR    + + +       Y    +P    
Sbjct: 680 INDMPEEDRWIISRVNSLARTTAGDMQEYHLHRVTRALAAFILEDLSRWYVQLVRPRMWL 739

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           + +             V+R+L  LL  F P +A +I+  L +A +      LD 
Sbjct: 740 EEDSPEKRYAYETVYYVMRRLVALLAPFTPHIAEEIYGNLRLAGDPESVHMLDW 793



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +  +      Y     H+G A+  II D + R+HR+ G +++   G D HG  I   
Sbjct: 35  KDGKAFFFVDGPPYTTGHIHLGTAWNKIIKDTILRYHRMGGRNIIERAGYDMHGLPIEVK 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            ++                      + F   +     +    L I   +DD  +T +  +
Sbjct: 95  VEHQLGFTSKKDIEDYGIAAFIEQCRTFAVTHMEIMSEQFRQLGIWLDFDDPYQTIKAEY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     ++  ++G + +G     +  R E    D EV    +         PV   E 
Sbjct: 155 IESAWWAVQRAEERGLLERGHRVVNWCPRCETAIADSEVEYWDETDPSIFVKFPVTGREN 214

Query: 163 E 163
           E
Sbjct: 215 E 215


>gi|90022948|ref|YP_528775.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122995879|sp|Q21FG6|SYL_SACD2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89952548|gb|ABD82563.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 819

 Score =  160 bits (404), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y      YP+ + H+GH     I+DV++RFHR+ G +VL   G D  G     AA
Sbjct: 31  TKEKFYCLAMFPYPSGRLHMGHVRNYTISDVISRFHRMQGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N+   R     L   +D    + T +  ++   +  + ++ +KG  Y
Sbjct: 91  IKNNTAPAKWTYSNTDYMRKQLTELGFGFDWSREVTTCKPDYYKWEQWFFTRLYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G            V+  E   +F R++ Y ++LL+  
Sbjct: 151 KKVASVNWCPNDQTVLANEQVVDGQ----CWRCDTAVERKEIPQWFIRITDYAEELLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++           G
Sbjct: 207 DKLPNWPEQVKTMQRNWIGKSQG 229



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 104/276 (37%), Gaps = 34/276 (12%)

Query: 232 IDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y       +     D  KA +W P D +V G +    H +Y   F         
Sbjct: 496 FMESSWYYARYTSPNADSMLDPDKANYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEGL 555

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +  + P  +++   G +L  G K+SKS GN +DP ++I+  G D +R F +      +  
Sbjct: 556 VECDEPF-ERLLCQGMVLKDGTKMSKSKGNTVDPEDLIKTYGADTVRLFSMFAAPPEQSL 614

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +   G++       A      + ++V+  L+          +  E  +++       + 
Sbjct: 615 EWTDSGVEG------AFRFLKKLWKAVASHLEAGSAGEIDANSLDEQQKALRRKTHETIS 668

Query: 400 EIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++ ++   +   + A+A V+ L++E+ R  D   P  L     +R +      +      
Sbjct: 669 KVSDDYGRRQTFNTAIAAVMELLNEITRSADRSTPNGLA---VEREALEAATLLLA---- 721

Query: 459 AILLQAFVPKLANKIFDILF--VADENRCFQSLDQR 492
                  VP   + ++      VA  +  + ++D+ 
Sbjct: 722 -----PIVPHACHALWQAFGNEVAVLDAPWPTVDEA 752


>gi|146310834|ref|YP_001175908.1| leucyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980077|sp|A4W827|SYL_ENT38 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145317710|gb|ABP59857.1| leucyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 894

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDNLDHWPDTVKTMQRNWIGRSEG 229



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 107/322 (33%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 524 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 583

Query: 280 -----------------------------LSANLPLPKKVFSHGFILHKGE--------- 301
                                        ++        V +      KG          
Sbjct: 584 DAGLVNSDEPAKQLLCQGMVLADAFYYVGVNGERNWVSPVDAIVERDEKGRIVKAKDAAG 643

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 644 NELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 699

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       +      GA +E  +++     + + ++ +++  +   +
Sbjct: 700 --ANRFLKRVWKLVYEHTSQGEAPALNVGALSEDQQALRRDVHKTIAKVTDDIGRRQTFN 757

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P   ++   DRA     +  E +  +  +L  F P    
Sbjct: 758 TAIAAIMELMNKL-----ARAP---QEGEQDRA-----LMREALLAVVRMLNPFTPHACF 804

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 805 TLWQELKGEGDIDNAPWPVADE 826


>gi|78484824|ref|YP_390749.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123555907|sp|Q31IE8|SYL_THICR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78363110|gb|ABB41075.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 877

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 13/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 39  SKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRFQRMQGKNVLQPMGWDAFGLPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  QN    R+    L + YD    + T    ++   + L+ ++ +KG +Y
Sbjct: 99  MDNQVAPAKWTYQNIDYMRNQLKRLGLGYDWTREVATCHPEYYRWEQWLFTRLMEKGLVY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G   +       PV+  E   +F R++ Y ++LL+  
Sbjct: 159 RKLSVVNWDPVDQTVLANEQVIDGKGWRSGV----PVERKEIAQWFLRITDYAEELLTDL 214

Query: 181 ESHPEFILPIERRNEVISFVKSGLK-------DLSLSRKTFDWGIKIPDDPQYIMYV 230
           +    +   ++   +      +GL+        L  S  +       PD    + YV
Sbjct: 215 DQLEGWPEQVKTMQKNWIGKSTGLEIEFPIASGLDESNGSLKVYTTRPDTLMGVTYV 271



 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 77/194 (39%), Gaps = 21/194 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I++ G D LR +++      +   +    ++        N +   
Sbjct: 634 KMSKSKNNGIDPQTLIDQYGADTLRLYIMFASPPEQTLEWSDSAVEGAHR--FLNRVWRQ 691

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
           V   VS           +    T+  +++       LQ++ ++M +    + A+A  + L
Sbjct: 692 VQTHVST---GVVAACTSNDDLTKEQKALRLKLHTTLQKVTDDMGRRMHFNTAIAATMEL 748

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++++ R+          K   D   +V+    E +  L ++L    P  +  +++ L   
Sbjct: 749 LNDISRF----------KDESDAGRSVMQ---EALEMLVLMLSPMTPHASQALWEALGHD 795

Query: 481 D--ENRCFQSLDQR 492
               N  + ++D  
Sbjct: 796 GLVLNVTWPTVDDA 809


>gi|300937884|ref|ZP_07152676.1| leucyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300457109|gb|EFK20602.1| leucyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 110/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGGVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     +  DRA     +  E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP---TDSEQDRA-----LMQEALLAVIRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|238755183|ref|ZP_04616529.1| Valyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706630|gb|EEP99001.1| Valyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 958

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 132/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 381 IEPMLTDQWYVRTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 438

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 439 GHRIPAWYDEAGKVYVGRDEAEVRRENHLAADVALRQDEDVLDTWFSSGLWTFSTLGWPE 498

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P  + V G DI+ F         +           +P      +      
Sbjct: 499 QTEALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 557

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 558 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 617

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 618 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGQNGGE 674

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  +  
Sbjct: 675 MVLSLADRWILAEFNQTVKAYREALDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNN 733

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +           + V+  L  L    +P +   I+  
Sbjct: 734 GSEAELRGTRNTLINVLEALLRLAHPIIPYITETIWQR 771



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 37  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 96

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 97  VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGTITRQMRRLGNSVDWERERF--TMDD 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 155 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 211


>gi|222529245|ref|YP_002573127.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456092|gb|ACM60354.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 817

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     A
Sbjct: 28  SSKPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  
Sbjct: 88  AIKHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    E    +++V  G          + V   + E +FFR++ Y ++LL  
Sbjct: 148 YRKRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   +       G
Sbjct: 204 IEKLDGWPEKVKIMQKNWIGRSEG 227



 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 154/447 (34%), Gaps = 55/447 (12%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + + + + +     I  ++     E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLSIKVVIKGEGIDIENLQSAYEDEGVLINSGIFNG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +++K  + K            A             Q Y     P+ + EE G        
Sbjct: 390 LNNKEAMKKITQYLEQKGVGRACVTYKLRDWLISRQRYWGAPIPIVYCEECGIVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y                 + F  +G   LS   +  +        P       +
Sbjct: 450 LPVLLPY----------------NVEFKPTGQSPLSYCEEFVNTTCPKCGKPAKRETDTM 493

Query: 233 DALTNYLTTTGYLDNPDGSK--------AKFWPADLHVIGKDILRFHAIYWPAF----LL 280
           D             +P   K        + + P D ++ G +    H +Y   F      
Sbjct: 494 DTFICSSWYYFRYTDPKNDKKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYD 553

Query: 281 SANLPL---PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
              +P     K + + G +L  G K+SKSLGN++ P +++E  G D  R F++      +
Sbjct: 554 LGYVPFEEPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIVERYGADTARLFILFAAPPER 613

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSR 396
           D  +   G++         G    ++R   + ++  D +        +E D+ +    + 
Sbjct: 614 DLEWSDQGVE---------GCFRFLNRLWRLYIELKDKLADDNLIGESELDDELRYRLNY 664

Query: 397 VLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ E++ +    + A++ ++ L++ +  Y   ++  +L K           +  + +
Sbjct: 665 TIKKVTEDIAERFNFNTAISTIMELLNFLYEY---KECGKLNKD----------LIKDTL 711

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
           R L IL+  F P +A ++++I+   ++
Sbjct: 712 RNLLILIYPFTPHIACELWEIMGYGND 738


>gi|94676685|ref|YP_588685.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081495|sp|Q1LTM9|SYL_BAUCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94219835|gb|ABF13994.1| leucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 861

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DVL+R+HR+ G +V+   G D  G    +AA
Sbjct: 31  SKEKYYCLSMLPYPSGNLHMGHVRNYTIGDVLSRYHRMLGKNVMQPIGWDAFGLPAERAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +     L  SYD    I T    ++   +  + ++ +KG +Y
Sbjct: 91  LKNQTAPATWTYANIETMKKQLKQLGFSYDWSREITTCRPEYYRWEQWFFIQLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G           P+   +   +F +++AY D+LL   
Sbjct: 151 KKTSFVNWCSNDQTVLANEQVIDG----CCWRCGAPIMLKDIPQWFLKITAYADQLLHDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   I+           G+ 
Sbjct: 207 DKLDGWPEQIKNMQRNWIGRSEGIN 231



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 80/202 (39%), Gaps = 22/202 (10%)

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
           H  +     K+SKS  N IDP+ ++E+ G D +R F++          + + G++     
Sbjct: 611 HHLVYAGTIKMSKSKNNSIDPLTMVEKYGADTIRLFIMFASPVTMALEWRESGVEG---- 666

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIH 411
             AN     + +     ++    +     A +  ++ +     + + ++ +++      +
Sbjct: 667 --ANRFLKRLWKLTYDHIQRGKVIKLDLAAMSNDNKILRRELHQTIAKVTDDISRRYAFN 724

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ +    ++   A        +  DRA     +  E +  +  +L  F P L  
Sbjct: 725 TAIAALMEI---TNKLMHAS-----YHSQQDRA-----IVQEALLAVVRMLYPFTPHLCF 771

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
           K++  L      +N  +  +DQ
Sbjct: 772 KLWQALNGEGDIDNAPWPIVDQ 793


>gi|300951141|ref|ZP_07165005.1| leucyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300959213|ref|ZP_07171290.1| leucyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301028879|ref|ZP_07192053.1| leucyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301643943|ref|ZP_07243970.1| leucyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331641145|ref|ZP_08342280.1| leucine--tRNA ligase [Escherichia coli H736]
 gi|299878150|gb|EFI86361.1| leucyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300314174|gb|EFJ63958.1| leucyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449570|gb|EFK13190.1| leucyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|301077713|gb|EFK92519.1| leucyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331037943|gb|EGI10163.1| leucine--tRNA ligase [Escherichia coli H736]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 550 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 609

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 610 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 669

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 670 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 723

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE+ +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 724 VYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 783

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 784 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 830

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 831 NAPWPVADEK 840


>gi|325848747|ref|ZP_08170257.1| isoleucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480391|gb|EGC83453.1| isoleucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 1036

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 73/458 (15%), Positives = 156/458 (34%), Gaps = 31/458 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +      ++ F    D  G              K   D N   F  + D   +    + +
Sbjct: 331 YQLGRKYNLPFVQPVDLEG-----CFTETPWKGKFIFDTNEEIFLHLRDEGKV----YKK 381

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            T + ++  C      +          Y     L ++   N++ V             N 
Sbjct: 382 QTIEHNYPHCWRCKTPL--VYYAKPSWYIEMSKLSEKMVENNNGVNWYPQTIGDKRFGNW 439

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +++              L   +          R+       +   +D+ L R   D 
Sbjct: 440 LENVKDWAISRSRYWGTPLNLWRCDDCGHVESIGSRKELAEKAREDISEDIELHRPYVDD 499

Query: 217 GIKIPDDPQYIMY-------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                 D   +M+       VW D+     +   Y          ++PAD    G D   
Sbjct: 500 VTITCPDCGKVMHRVPDVIDVWFDSGAMPFSQVHYPFEKGEDLDDYFPADFICEGIDQTR 559

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + +++   P    + +   +   G+K+SKS GN ++P E+ ++ G DA+R+
Sbjct: 560 GWFYSLMAISTIITGKAPYKNVLVNDLVVDKNGQKMSKSKGNTLNPFELFDKYGADAVRF 619

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY----DGMIPTPGAF 383
           + +    C     +D+ GL +  N +    I N+ +        D     +         
Sbjct: 620 YSLYVSPCWVPTKFDEKGLIEVKN-NFFRTIENVYNFFALYANTDNIEIDEIKNFENVEL 678

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT 439
            E D+ + S  + +L+   E M++   ++ +  V   V     + Y   + ++ W    T
Sbjct: 679 EEIDKWLYSKLNSLLKAYYEQMESFDYNKVVHLVNDFVVEDLSNWYIRRNRKRFWSQDLT 738

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +A  V     +V+  L+ ++    P ++ +I+  L
Sbjct: 739 ESKKA--VYKTCYDVLLSLSKMIAPIAPFISEEIYRNL 774



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 19/165 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E+  I       N +P I H     + D+ +R+  + G  VL   G D HG  +   
Sbjct: 37  KDAEEYIIFDGPPTANGKPGIHHVIARTLKDMTSRYKNMKGFKVLKKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRH 102
            +                       K  V + S  +RDM+D +   Y  D+   T +  +
Sbjct: 97  VEKELGFSEKDQIEEYGVEKFNQKCKDSVFKYSDMWRDMSDRMAFLYDMDNPYITLDNDY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +T   L  +   KG IY+G     Y  R        EV +G   
Sbjct: 157 IETEWWLLNQAFKKGLIYEGAKVMPYCPRCGTGLASHEVAQGYQM 201


>gi|293413938|ref|ZP_06656587.1| leucyl-tRNA synthetase [Escherichia coli B185]
 gi|300920543|ref|ZP_07136969.1| leucyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|309795491|ref|ZP_07689908.1| leucyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|291433996|gb|EFF06969.1| leucyl-tRNA synthetase [Escherichia coli B185]
 gi|300412482|gb|EFJ95792.1| leucyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|308120866|gb|EFO58128.1| leucyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|324016071|gb|EGB85290.1| leucyl-tRNA synthetase [Escherichia coli MS 117-3]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 550 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 609

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 610 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 669

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 670 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 723

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 724 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 783

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 784 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 830

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 831 NAPWPVADEK 840


>gi|238762875|ref|ZP_04623843.1| Leucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698886|gb|EEP91635.1| Leucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 860

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDTLESWPEQVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 117/326 (35%), Gaps = 39/326 (11%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +  Q        +   + LP+++    I      L       K     G
Sbjct: 493 FMESSWYYARYTCPQYDEGMLDPAAANYWLPVDQYIGGIEHAIMHLMYFRFFHKLLRDAG 552

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   D+P   +      L        Y     G +    PAD  V   D  R        
Sbjct: 553 LVNSDEPAKRLLCQGMVL----ADAFYYTGTSGERIWVSPADAIVERDDKGR-------- 600

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            + +A+    + V++         K+SKS  N IDP  ++E+ G D +R F++       
Sbjct: 601 IIKAADAEGHELVYAGM------SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEM 654

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + + G++       AN     V R V                 TE  +S+     + 
Sbjct: 655 TLEWQESGVEG------ANRFLKRVWRLVFDHTTKGPVAALDIANLTEEQKSLRRELHKT 708

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A V+ L++++ R      P   ++T  DRA     +  E + 
Sbjct: 709 IAKVTDDVGRRQTFNTAIAAVMELMNKLGR-----AP---QETEQDRA-----LLQEALL 755

Query: 457 QLAILLQAFVPKLANKIFDILFVADE 482
            +  +L  F P +   ++  L    +
Sbjct: 756 AVVRMLYPFTPHVCFSLWQALGGEGD 781


>gi|294625214|ref|ZP_06703855.1| valyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600488|gb|EFF44584.1| valyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 944

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 74/415 (17%), Positives = 139/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQIQFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDDAGKCYVGHDEAEVRAKHGLGAEIALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 AQAMAERGFERYLPSTVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEDLVAKRTTGLMKPKDAPKIEKATRKEFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +V  E + +  N         +         D + +  KP  L   +
Sbjct: 664 RTEAEKWILARLDKVTAETQAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNHQD 722

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       QS  Q
Sbjct: 723 ADAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPRLGITTATISLQSFPQ 777



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGQTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|89895904|ref|YP_519391.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670334|ref|YP_002460769.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997225|sp|Q24SP5|SYL_DESHY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782494|sp|B8FUR3|SYL_DESHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89335352|dbj|BAE84947.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540594|gb|ACL22333.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 827

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y      YP+   H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 30  SDKPKFYALAMFPYPSGNLHMGHVRNYSIVDVIARFKRMRGYNVLHPIGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  N +     + ISYD    + T    ++   + ++ +    G +
Sbjct: 90  AIKNQTPPAEWTWKNIANMKRQLQEMGISYDWEREVTTCHPDYYKFTQWIFLEFYKHGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA           V   + E +FF+++ Y   LL  
Sbjct: 150 YKKKAGVNWCPSCATVLANEQVVDGA----CERCDTAVTKKDLEQWFFKITDYAQVLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E  P +   ++   +       G
Sbjct: 206 LEKLPGWPDKVKTMQKNWIGRSEG 229



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 102/281 (36%), Gaps = 29/281 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y              A  W   D +V G +    H +Y   F   
Sbjct: 496 DTMDTFMCSSWYFLRYTDPHNAQLPFAKEAADHWMNVDQYVGGVEHAILHLLYSRFFTKA 555

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L  + P    + + G +   G K+SKS GNV+ P E+I + G D  R F++   
Sbjct: 556 LRDFGYLKVDEPFA-NLLTQGMVCLGGAKMSKSKGNVVSPEEIISKYGADTARLFILFAA 614

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  ++  G++        N +  L ++    +LK         G   ++ + +   
Sbjct: 615 PPERDLEWNDQGVEGCYR--FLNRVWRLAAQY-EEVLKTTGAGANEFGELDKAAKDMRRQ 671

Query: 394 CSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             + +Q +  ++      + A++ ++ LV+ +           L K  P      L V  
Sbjct: 672 THQTIQRVTSDVGARFNFNTAVSAIMELVNAL----------YLYKEQP---QVNLAVAR 718

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
           E +  + ILL  F P +  +I+  L   D   +R +  +D+
Sbjct: 719 EALESILILLAPFAPHITEEIWSELGHEDSIHSREWPQVDE 759


>gi|270296139|ref|ZP_06202339.1| valyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270273543|gb|EFA19405.1| valyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 877

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 125/366 (34%), Gaps = 58/366 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    +      P + +N         +KD  +SR+   
Sbjct: 351 PIEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWCISRQ-LW 408

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 409 WGHRIPAYFLLEGGYVVAATPEEALALAKEKTGNADLKLEDLRQDEDCLDTWFSSWLWPI 468

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    ++NP   +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 469 SLFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVR 528

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D    ++  N     
Sbjct: 529 DKLGRKMSKSLGNSPDPLDLIEKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN----- 583

Query: 357 GIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
              N +  +  +I   +    +P P A   +     +  + V  E+ +      +  AL 
Sbjct: 584 -FNNKIWNAFRLIKGWEVSAEVPVPEASELAIRWFEAKQNEVAAEVADLFSKYRLSEALM 642

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P     +     E        L  LL  F+P +  
Sbjct: 643 AVYKL------FWDEFSSWYLEMIKPAYGQPINRKVYEATIGFFDNLLHLLHPFMPFITE 696

Query: 472 KIFDIL 477
           +++  L
Sbjct: 697 ELWQHL 702



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 63/209 (30%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLKYMVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNTW 240


>gi|319783175|ref|YP_004142651.1| valyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169063|gb|ADV12601.1| valyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 927

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 124/346 (35%), Gaps = 20/346 (5%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEG-YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           V K  +  Y++   N   W      ++                       +    E    
Sbjct: 408 VPKNWEKTYFDWMENIQPWCISRQLWWGHQIPAWYGPDGRVFVEKTEEEALSAAIEFYLA 467

Query: 200 VKSGLKDLSLSR-KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           ++   K     + + F  G  +  D   ++  W  +     +T G+ D     K  ++  
Sbjct: 468 LEGPWKAWVEDKLENFKPGEILTRDED-VLDTWFSSALWPFSTLGWPDETPELKT-YYQT 525

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVID 312
           D+ V G DI+ F    W A ++   L    +   H   +H       G K+SKS GNVID
Sbjct: 526 DVLVTGFDIIFF----WVARMMMMGLHFMDEEPFHTVYVHALVRDKNGAKMSKSKGNVID 581

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P+++I+E G DALR+ L    A G+D   D   +      +    + N  +R   M    
Sbjct: 582 PLDLIDEYGADALRFTLTVMAAQGRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNEVA 638

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDA 430
            +       A    +  IL+  +R  +EI + + +   + A       V     D Y + 
Sbjct: 639 RNDDFWLNDAKLAVNRWILTELTRAAREITDGITSYRFNEAAGAAYRFVWNLFCDWYLEL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            KP     T+    +        V+ ++  LL   +P +  +++  
Sbjct: 699 LKP-VFMGTDEAAKAESRACVAFVLDEIYKLLHPMMPFMTEELWAQ 743



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 22/172 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-------- 58
             I           H+GHA    + D+L RF R+ G +VL+  G D  G           
Sbjct: 38  FTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKNVLWQPGMDHAGIATQMVVERQL 97

Query: 59  -AKAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             K      +T + F+++                + +    D S + F  T ++      
Sbjct: 98  MEKQIHRRDLTREQFIEKVWEWKAESGGAIFNQLKRLGASADWSRERF--TMDEGLSKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             ++  +  +G IYK      +  +     +D EV +            PV+
Sbjct: 156 LEVFVTLYKEGLIYKDKRLVNWDPKLLTAISDLEVEQQEVNGNLWHFRYPVE 207


>gi|332183966|gb|AEE26220.1| Leucyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 813

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     A
Sbjct: 29  KNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A     +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  
Sbjct: 89  AIKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEGYYKWEQWFFIQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F +++ Y D+LL  
Sbjct: 149 YRKNSVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKKEIPQWFLKITDYADELLQD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   ++           GL
Sbjct: 205 LTKLDGWPEAVKTMQTNWIGKSKGL 229



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 75/483 (15%), Positives = 144/483 (29%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N +  +  
Sbjct: 310 HPISGETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYNIPLKQVIESNDKKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLIEQVKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G           +L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEDNLPVILPTDVTLTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                          G     +       + ++   Y   T    +    +   +  P D
Sbjct: 477 ----------ACPKCGKPAKRETD-TFDTFFESSWYYARYTCPTADQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN +
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNTV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKD 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +          
Sbjct: 639 IFTKNIALESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKI---------- 688

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
                   T  +  +    V VE    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 689 ------LNTLNNYNNLSESVKVEGFSILLRVLAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|315299184|gb|EFU58438.1| leucyl-tRNA synthetase [Escherichia coli MS 16-3]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|292492122|ref|YP_003527561.1| valyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291580717|gb|ADE15174.1| valyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 963

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 131/396 (33%), Gaps = 82/396 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F + +   +  +   E+     +P    N+V       ++D  +SR+   W
Sbjct: 388 IEPYLTDQWFVKAAPLAEPAIKAVENGQIRFIPENW-NKVYFEWMRNIQDWCISRQ-IWW 445

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    DP+                             ++  W  +     +T G+ +
Sbjct: 446 GHRIPAWYDPEGKVYVAPTEAQVRRKYNLSPDLPLEQDPDVLDTWFSSALWPFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                   F+P  + V G DI+ F    +       +  +P  +          +G+K+S
Sbjct: 506 ETPQLHT-FYPTSVLVTGFDIIFFWVARMIMMGLKFTGEVPFREVYIHGLVRDAEGQKMS 564

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DALR+
Sbjct: 565 KSKGNVLDPLDLIDGIELETLVTKRTSGLMQPAMAKRIEKATRKEFPQGIPAFGCDALRF 624

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES- 386
                   G+D  +D   ++     +  N + N  +R V M +       P      E  
Sbjct: 625 TFAILATRGRDIRFDLGRIEG--YRNFCNKLWN-AARYVLMNVSSERQSHPEQTTGDEVL 681

Query: 387 ---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
              +  I+S      Q++ E ++N    RA   +         D Y +  KP      +P
Sbjct: 682 GTPERWIISRLQSTTQQVIEGIENYRFDRAAQAIYDFTWNEYCDWYLELSKPVLNNPASP 741

Query: 442 DRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + A        VEV+  L  L    +P +  +I+  
Sbjct: 742 EAAKRGTRRTLVEVLEALLRLAHPIIPFITEEIWQQ 777



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
              I  PN     H+GHA++  I D L R+HR+ G + L+  GTD  G            
Sbjct: 34  CIMIPPPNVTGHLHMGHAFQDTIMDALIRYHRMRGDNTLWQVGTDHAGIATQIVVEQQLN 93

Query: 60  -----------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +A        K       +R  R M   +D S + F  T ++       
Sbjct: 94  GEGKTRHDLGREAFIQRVWEWKEHSGGTITRQLRRMGASVDWSRERF--TMDEGLSKAVC 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ D+G IY+G     +        +D EV    +  +      P+
Sbjct: 152 EVFVRLYDEGLIYRGQRLVNWDPMLHTAISDLEVVSEEEHSHLWHMRYPL 201


>gi|331682066|ref|ZP_08382690.1| leucine--tRNA ligase [Escherichia coli H299]
 gi|331080745|gb|EGI51919.1| leucine--tRNA ligase [Escherichia coli H299]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|323454405|gb|EGB10275.1| hypothetical protein AURANDRAFT_22805 [Aureococcus anophagefferens]
          Length = 955

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 125/380 (32%), Gaps = 23/380 (6%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY--YESHPEFILPI 190
           + + N   +         N     V    E+ ++  L   QD  +S   +  H   +   
Sbjct: 414 QWFVNTTVMGARGVDAVRNGDIKIVPKRFEKEWYNWLENIQDWCVSRQLWWGHQIPVWYA 473

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
              +                    D G  +  DP  ++  W  +      T G+ D    
Sbjct: 474 AGHDGYFCARSEDDARAQARAAGVDDGTALTRDPD-VLDTWFSSGLWPFATVGWPDATP- 531

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSL 307
             +KF+PA     G DIL F    +       +   P  + ++ HG +  K  EK+SK+ 
Sbjct: 532 DFSKFYPATCLETGYDILFFWVARMVMLGLEFTGESPF-EVIYMHGLVRDKNNEKMSKTK 590

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR--- 364
           GNV+DP++V++E G DALR+ LV  +  G+D     D +K+  N +  N I N       
Sbjct: 591 GNVVDPLDVVDEFGADALRFSLVTGVTPGQDVPLSMDKVKE--NRNFCNKIWNAARFLEP 648

Query: 365 -SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
                   D         A    +  I+S      +     +++  I  A  +       
Sbjct: 649 KLAGATPSDGPIQAAELAAMPVFERYIVSKAHECAEASAAALEDYAIGDAGRRAYEFFYN 708

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--FV 479
              D Y +  K         D A                L+  F+P +   ++  L    
Sbjct: 709 EFADWYVEVSKTRS-----GDDAEASQRALAYAFEVCLKLIHPFMPHVTEFLWQKLYNGA 763

Query: 480 ADENRCFQSLDQRLKPGFML 499
            DE     +       G  L
Sbjct: 764 GDERAALMAAPYPALEGAAL 783



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 25/142 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  +  PN   + H+GHA  + + D+LARFHR  G   L+  GTD  G       + A  
Sbjct: 92  TCPMPPPNVTGRLHLGHAMFVALQDILARFHRARGRPTLWLPGTDHAGIATQLLVERALA 151

Query: 68  TT-----------------KVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +                    + D+N    +   R +    D S + F  T +       
Sbjct: 152 SEGSPTRAELGRDKFLERVWRWKDENGGAITSQMRRLGASADWSREKF--TLDDDMSRAV 209

Query: 107 RILWKKISDKGDIYKGCYSGWY 128
              + ++ +KG +Y+G     +
Sbjct: 210 TEAFVRLHEKGLVYRGSRMVNW 231


>gi|300817839|ref|ZP_07098053.1| leucyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300823042|ref|ZP_07103176.1| leucyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300907819|ref|ZP_07125435.1| leucyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300927256|ref|ZP_07142986.1| leucyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301302123|ref|ZP_07208256.1| leucyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301329167|ref|ZP_07222162.1| leucyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|331666995|ref|ZP_08367869.1| leucine--tRNA ligase [Escherichia coli TA271]
 gi|331676301|ref|ZP_08377013.1| leucine--tRNA ligase [Escherichia coli H591]
 gi|300400451|gb|EFJ83989.1| leucyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300416790|gb|EFK00101.1| leucyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300524391|gb|EFK45460.1| leucyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300529536|gb|EFK50598.1| leucyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300842675|gb|EFK70435.1| leucyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300844490|gb|EFK72250.1| leucyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|315255053|gb|EFU35021.1| leucyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|331066219|gb|EGI38103.1| leucine--tRNA ligase [Escherichia coli TA271]
 gi|331076359|gb|EGI47641.1| leucine--tRNA ligase [Escherichia coli H591]
 gi|332104134|gb|EGJ07480.1| leucyl-tRNA synthetase [Shigella sp. D9]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 550 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 609

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 610 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 669

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 670 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 723

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 724 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 783

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 784 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 830

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 831 NAPWPVADEK 840


>gi|157146740|ref|YP_001454059.1| leucyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083945|gb|ABV13623.1| hypothetical protein CKO_02514 [Citrobacter koseri ATCC BAA-895]
          Length = 868

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 214 LDKLDHWPDTVKTMQRNWIGRSEG 237



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 101/310 (32%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 511 YTCPQYNEGMLDPEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 570

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 571 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 630

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 631 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 684

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       +       A +E  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 685 VYEHTAKGEVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 742

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P     +++ L      +
Sbjct: 743 ----------KLAKA-PQEGEQDRALMQEALLAVVRMLNPFTPHACFTLWEALKGEGDID 791

Query: 483 NRCFQSLDQR 492
           N  +   D +
Sbjct: 792 NAPWPVADDK 801


>gi|1778560|gb|AAB40843.1| leucine tRNA synthetase [Escherichia coli]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 550 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 609

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 610 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 669

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 670 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 723

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE+ +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 724 VYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 783

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 784 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 830

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 831 NAPWPVADEK 840


>gi|26246623|ref|NP_752663.1| leucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|227884378|ref|ZP_04002183.1| leucyl-tRNA synthetase [Escherichia coli 83972]
 gi|300989992|ref|ZP_07179068.1| leucyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300996688|ref|ZP_07181513.1| leucyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301049839|ref|ZP_07196778.1| leucyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331645800|ref|ZP_08346903.1| leucine--tRNA ligase [Escherichia coli M605]
 gi|26107022|gb|AAN79206.1|AE016757_110 Leucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|227838464|gb|EEJ48930.1| leucyl-tRNA synthetase [Escherichia coli 83972]
 gi|300298391|gb|EFJ54776.1| leucyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300304466|gb|EFJ58986.1| leucyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300407267|gb|EFJ90805.1| leucyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|315292088|gb|EFU51440.1| leucyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|320194176|gb|EFW68808.1| Leucyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|324006304|gb|EGB75523.1| leucyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324010466|gb|EGB79685.1| leucyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331044552|gb|EGI16679.1| leucine--tRNA ligase [Escherichia coli M605]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|242238544|ref|YP_002986725.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130601|gb|ACS84903.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 860

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIEYMKNQLKVLGFGYDWDREVTTCRPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY ++LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFVKITAYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 75/311 (24%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK---AKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T    +        A +W P D +V G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYDQGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMR 549

Query: 280 ----LSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
               +++N P                             V        KG          
Sbjct: 550 DAGLVNSNEPAKRLLCQGMVLADAFFYTGDNGERIWVSPVDVTVERDDKGRIVKAFDQEG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E+ G D +R F++          + + G++     
Sbjct: 610 RELVYAGMSKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V                 T+  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKQVYDHTAKGSTQPLNIAELTDDQKALRRDLHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P  A     +T E +  +  +L  F P ++ 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQGAEQDRALTQETLLAVVRMLYPFTPHVSF 770

Query: 472 KIFDILFVADE 482
            ++  L    +
Sbjct: 771 TLWHELQGEGD 781


>gi|217967945|ref|YP_002353451.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217337044|gb|ACK42837.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 810

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++K Y      YP+   H+GH     I DV+AR++ + G +VL   G D  GQ    A
Sbjct: 29  SDKQKYYTLVMFPYPSGDLHMGHMRNYTIGDVVARYYTMKGYNVLNPMGWDAFGQPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V  K +  +N    ++    + +   +D  +      ++   + ++ K+ ++G  
Sbjct: 89  AIKNKVHPKEWTYRNIARMKEQLFKMGVVYDWDREVTACAPDYYKWTQWIFLKLYERGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G           PV+  E E +FF+++ Y + LL+ 
Sbjct: 149 YRKKAPANWCPTCKTVLANEEVIDG----RCWRCKTPVERREFEQWFFKITEYAEALLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            ++   +   ++   +       GL
Sbjct: 205 LDTLEHWPEKVKLMQKNWIGKSEGL 229



 Score =  116 bits (291), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 103/250 (41%), Gaps = 36/250 (14%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPK 288
           Y       +    +KA++W P D +  G +    H +Y          A       P  K
Sbjct: 506 YTDPHNDKEPFSRNKAEYWMPVDQYTGGIEHAILHLLYSRFITKVLYDAGYSPVREPF-K 564

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           ++F+ G +   G+ +SKSLGN++    ++E  G D  R F++       D  +  +G++ 
Sbjct: 565 RLFTQGMVYKDGQIMSKSLGNIVSVDYMVENYGADTARLFILFVAPPEVDIEWSDEGVE- 623

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                   G    ++R   ++L+D +     P    E ++ I     + ++++ E+++N 
Sbjct: 624 --------GANRFLNRFWRLVLEDAEV---EPKIDEEQEKLIKRKLHKTIKKVTEDIENF 672

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A ++ L    +  F+ ++ +                  E IR   +LL  FVP 
Sbjct: 673 KFNTAIAAIMEL---TNLLFEHKRSFGR-----------TPAFEEAIRTSILLLSPFVPH 718

Query: 469 LANKIFDILF 478
           +  +++  L 
Sbjct: 719 ITEELWVELG 728


>gi|193214471|ref|YP_001995670.1| isoleucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087948|gb|ACF13223.1| isoleucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 1078

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 68/407 (16%), Positives = 144/407 (35%), Gaps = 19/407 (4%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCY----SGWYSLRDEAYYNDDEVYKGADGQY 149
           +IRTT+             I+ + +           G +   ++ +    E + G     
Sbjct: 415 YIRTTD------VAKRMMAINKEINWCPPEIGSGRFGNWLEENKDWAISRERFWGTPLPV 468

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           + ++   +      G  F +S+  +    + +   + +   +   +    +    K    
Sbjct: 469 WVSEDFQIGDDHTSGKMFAVSSIAELKEGFIDIEGKQMKLSDALEQKFVELDLH-KPFVD 527

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIGKDIL 268
           S      G      P+ ++ VW D+         Y            +PAD    G D  
Sbjct: 528 SVYFIKDGKTFRRTPE-LIDVWFDSGAMPFAQLHYPFENKKLFENGGFPADFIAEGVDQT 586

Query: 269 RFHAIYWPAF-LLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALR 326
           R       A   L  N P  K +  +G IL K G+K+SKS GNV+DP E++ + G D+LR
Sbjct: 587 RGWFYTLHAIGTLIFNKPAYKNLIVNGHILDKDGQKMSKSKGNVVDPFEMMSKYGADSLR 646

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
           ++L+      +   ++ + L +         + +     +   + ++D           +
Sbjct: 647 WYLISTSPPWRPKSFNPEELLEGQRKFFRALVNSYNFFVLYANVDEFDYSENNLPVCERS 706

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD 442
           E D  I+S  + +++ +   M+N     A   + +       + Y    +    K  N +
Sbjct: 707 ELDRWIISALNTLVKHVEAAMENYDPTAAARHIEAFTVDDLSNWYIRRSRRRFWKGENNN 766

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                     + +  ++ L+    P +++ I+  L        F+S+
Sbjct: 767 DKLAAYQTLYQCLLVVSKLVAPVSPFISDWIYRNLNEVSGKESFESV 813



 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 35/257 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-------- 64
               N +P + H +   I D++ R+  + G  V    G D HG  +  + +         
Sbjct: 49  PPTVNGKPGVHHVFSRTIKDLICRYRTMKGFSVRRKAGWDTHGLPVEISVEQKLGLKNKS 108

Query: 65  --AGVTTKVFVDQ----NSRNFRDMADVLD---------ISYDDFIRTTEKRHHDTCRIL 109
              G  T  F  +       +  D  +            +  D    T    + ++    
Sbjct: 109 QVEGFGTDEFNREAKALVYHHINDSKEGWGKLTELMGYWVDMDSPYITCTNEYIESVWWG 168

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
            K+I DKG IYK         + E   +  E+  G       + +   +  + +  F   
Sbjct: 169 LKQIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYREIKDPSVYVKFKLKDSDESFLVW 228

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--------DWGIKIP 221
           +           S+    +  +     +   + G+  L+ SR +          W I   
Sbjct: 229 T----TTPWTLISNVALCVGPDVEYVKVRTEEHGVLILAKSRISVLGKNEDGNTWEILET 284

Query: 222 DDPQYIMYVWIDALTNY 238
              + +  +  + L +Y
Sbjct: 285 CTGEDLEGIEYEPLFSY 301


>gi|282850252|ref|ZP_06259631.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579745|gb|EFB85149.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 822

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA         NPV+  +   +F R++ Y D+LL+ 
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDGA----CWRCDNPVEKKDLSQWFLRITEYADRLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDHWPQRVKLMQKNWIGRSEG 229



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 113/343 (32%), Gaps = 44/343 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E  G            L          +     +E          + 
Sbjct: 429 QRYWGVPIPVVYCETCGEQLVPEEELPVRLPEDVKFESGAVSPLATSENFLHTTCPKCNG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYTDAKNDQAPFDKKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLDLIDANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++      +D  +   G++              + R   ++    +    
Sbjct: 599 TYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIVDAYNEEAKK 649

Query: 379 TPGAFTESDE-SILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                   DE  +     RV++++ E++  N   + A++ ++ LV+ +            
Sbjct: 650 NVTGDLIKDEFGLRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMY----------- 698

Query: 437 KKTNPDRASTVLYVTVEVI-RQLAILLQAFVPKLANKIFDILF 478
              + D+A  +       +   L +LL  FVP +  +++  L 
Sbjct: 699 --AHKDKAEKINSALANELTHSLLLLLAPFVPHMTEELWHELG 739


>gi|121997481|ref|YP_001002268.1| valyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588886|gb|ABM61466.1| valyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 917

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 130/390 (33%), Gaps = 77/390 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R        +   E      +P         +++  ++D  +SR+   W
Sbjct: 348 IEPYLTWQWFVRAEPLARPAIEAVEDGRIRFIPGNWDKTYYEWLR-NIEDWCISRQ-IWW 405

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T G+ + 
Sbjct: 406 GHRIPAWYDEQGHVYVGRSEAEVRERHGLGDAPLTRDDDVLDTWFSSALWPFSTLGWPEQ 465

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            D  +  F+P  + V G DI+ F    +          +P  +          +G+K+SK
Sbjct: 466 TDALRT-FYPTSVLVTGFDIIFFWVARMIMFGLHFMGEVPFREIYIHGLVRDPEGQKMSK 524

Query: 306 SLGNVIDPIEVIEEV-------------------------------------GVDALRYF 328
           S GNV+DP+++++ +                                     G DALR+ 
Sbjct: 525 SKGNVLDPLDIVDGIDLESLVTKRTADMMQPQLAERIEAMTRRHYPDGIKAHGTDALRFT 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                  G+D  +D   ++     +  N + N  +R V M  +  D     P     ++ 
Sbjct: 585 FASLATTGRDVVFDLGRVEG--YRNFCNKLWN-AARYVLMNTEGADCGSGGPVELGAAER 641

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            I S   R + E+R+   +  + +A   +     +   D Y +  KP  L++    +A  
Sbjct: 642 WIRSRLDRTVAEVRQAFADYRLDQAAQAIYEFTWDEYCDWYLELSKP-ALREGTAAQARG 700

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                ++V+ +L  L    +P +   I+  
Sbjct: 701 TRQTLIQVLEELLRLTHPLMPFITEAIWQR 730



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  + D L R+HR+DG + L+  GTD  G       +    
Sbjct: 34  CIMIPPPNVTGTLHMGHAFQDTVMDALVRYHRMDGHNTLWQPGTDHAGIATQMVVERQLE 93

Query: 68  TT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
                               +  ++    ++    +  S D      T ++   +    +
Sbjct: 94  AEGLSRHDLGRERFLERVWQWKAESGGTIQNQLRRMGASVDWRRERFTMDEGLSEAVTEV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ ++  +Y+G     +        +D EV    +  +      P+
Sbjct: 154 FVRLYEEDLLYRGERLVNWDPVLHTAVSDLEVVSAEEQGHIWHMVYPL 201


>gi|206602308|gb|EDZ38789.1| Valyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 904

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 132/378 (34%), Gaps = 45/378 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++      +F R+       +           P   +N    +++  ++D  +
Sbjct: 360 CYRCQTVIEPALSLQWFVRMKELAKPAIEAVREGEIRFFPDGWKNTYYDWLE-NIRDWCI 418

Query: 210 SRKTFDWGIKIPD-----------------------------DPQYIMYVWIDALTNYLT 240
           SR+   WG  IP                              DP  ++  W  +      
Sbjct: 419 SRQ-IWWGHPIPAWHCSSCQEMVVDSRKPERCPRCGSEKLTADPD-VLDTWFSSALWPFV 476

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHK 299
           T G+ +N      +F+P  L V G DIL F               P  + V+ H  +  +
Sbjct: 477 TLGWPENTP-DFQRFYPTSLLVTGFDILFFWVARMVMMGYHFTGKPPFRDVYIHALVRDQ 535

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K++KS GNV+DP+E+++  G DA R  LV   + G+D     + ++     +  + I
Sbjct: 536 FGQKMTKSKGNVVDPLEIMDRYGTDAFRMTLVHMASPGRDIRLSTERVEG--FRNFVSKI 593

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N           +         +  + ++  IL   S+ + ++R          A   +
Sbjct: 594 WNAFRYVERFAPGETRIPEVDGQSLQSPANRWILVSLSQAVADMRRYFGLYRFDEAANTL 653

Query: 418 ISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                    D + +A K    +   +P++  TV  +       L  +    +P +  +++
Sbjct: 654 YHFTWHLYCDWFIEASKSVLDRPDDDPEKIETV-RILRFTGSVLLRMAHPVMPFVTGELW 712

Query: 475 DILFVAD---ENRCFQSL 489
           +IL+  +   E + F   
Sbjct: 713 EILYKDELPLEEQTFPDF 730



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 24/243 (9%)

Query: 13  IAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK---------- 60
           I  PN   + H+GHA  + + DV+ARF +++G DVL+  GTD  G               
Sbjct: 56  IPPPNITGRLHMGHALNITLQDVVARFRKMEGQDVLWIPGTDHAGIATQNVVERQLSREG 115

Query: 61  ------AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKK 112
                   +        + D       D    L   +S+++   T +         ++ +
Sbjct: 116 TALRSLTREEFVTRVWEWKDSIKSGILDQITRLGASLSWENERFTMDAGFSRAVTEVFIR 175

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWMEEEGYFFRL 169
           +  +G +Y+G     +  R     +D EV          Y     +P +         R 
Sbjct: 176 LYREGFLYRGERMIHWCPRCLTALSDVEVTYVEKSGTLYYVRYGESPGRDQSLVVATTRP 235

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-PDDPQYIM 228
                                  R   +  ++  +  ++ S    ++G  +    P + M
Sbjct: 236 ETIFADQALAIHPEDTRYQRWIGRKVFVPLIQREIPVIADSAVDPEFGTGVLKITPSHSM 295

Query: 229 YVW 231
             W
Sbjct: 296 ADW 298


>gi|312945189|gb|ADR26016.1| leucyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 111/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D         TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDVLTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|301025224|ref|ZP_07188793.1| leucyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300396153|gb|EFJ79691.1| leucyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|203288168|ref|YP_002223183.1| valyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085388|gb|ACH94962.1| valyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 877

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 134/378 (35%), Gaps = 44/378 (11%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+ +  D + +K   G  + +    ++      +F ++    D  L           P 
Sbjct: 327 RDKEFLIDVKNHKHQVGHCHRSG-EVIEPYLSNQWFVKMKPLADAALQALIDGKIRFYPR 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD------------------------- 223
           +  N       S +KD  +SR+   WG  I    D                         
Sbjct: 386 KWENT-YKHWLSNIKDWCISRQLV-WGHRIPAWYDVQTGEIVVSEFDPSLSKNYSGRSFV 443

Query: 224 -PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
               ++  W  +     ++ G+ D     K  ++P    V   DI+ F    +       
Sbjct: 444 RDSDVLDTWFSSWLWPFSSLGWPDVTFDLK-NYYPTTTLVTAYDIIFFWVARMVMAGLEF 502

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P      +      KG+K+SKSLGN IDP+++IE+ G DALR+ L      G+D  
Sbjct: 503 MGEVPFRDIYITPLLRDKKGQKMSKSLGNGIDPLKIIEQYGSDALRFTLSFLSVQGQDLN 562

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQ 399
            D                 N V  +   IL +    ++     F + D+ +++  +  + 
Sbjct: 563 IDTKDFM------FGAKFANKVFNASKFILSNLKGRLVLDSLEFDDIDKWLITRLNATVA 616

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            I  + +N   + A   V         D Y +  K   L   + D  +  +   +  +++
Sbjct: 617 VIDWSFENYKYNEATKAVYEFFWNDFCDWYIEISK-INLCSDDFDLQNITISKLIFFLKE 675

Query: 458 LAILLQAFVPKLANKIFD 475
             +++  F+P +  +I+ 
Sbjct: 676 SLLIMHPFIPFITEEIYS 693



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    + D+L R+ R+ G + L+  GTD  G       +  
Sbjct: 37  KFSMVAPPPNVTGILHMGHALNFTLQDILVRYKRMKGFNTLWLFGTDHAGIATQTVFEKQ 96

Query: 66  ---------GVTTKVFV-------DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                      + + F+       +++ +   +  + L  SYD      T +        
Sbjct: 97  LRELGKSKDDFSREEFIEGILELKNKHRKIIVNQVEKLGASYDHLRERFTLDDGLSRAVN 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  + +KG IYKG Y         +  +D+EV  
Sbjct: 157 KVFIDLYNKGLIYKGEYLVNLDPGSGSVVSDEEVEY 192


>gi|91209690|ref|YP_539676.1| leucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117622858|ref|YP_851771.1| leucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|237707384|ref|ZP_04537865.1| leucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|91071264|gb|ABE06145.1| leucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115511982|gb|ABJ00057.1| leucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|226898594|gb|EEH84853.1| leucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|315287086|gb|EFU46500.1| leucyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 907

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|331672181|ref|ZP_08372973.1| leucine--tRNA ligase [Escherichia coli TA280]
 gi|331070648|gb|EGI42011.1| leucine--tRNA ligase [Escherichia coli TA280]
          Length = 907

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 111/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     +  DRA     +  E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP---TDSEQDRA-----LMQEALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|226329632|ref|ZP_03805150.1| hypothetical protein PROPEN_03542 [Proteus penneri ATCC 35198]
 gi|225202818|gb|EEG85172.1| hypothetical protein PROPEN_03542 [Proteus penneri ATCC 35198]
          Length = 962

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 142/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R +      +   ++     +P +  N   S++   ++D  +SR+   W
Sbjct: 385 IEPLLTDQWYVRTAPLAKPAVEAVKNGDIQFVPKQYENMYFSWMND-IQDWCISRQ-LWW 442

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 443 GHRIPAWYDNEGNVYVGRDEEEVRRENNIAADVALRQDDDVLDTWFSSALWTFSTLGWPE 502

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P ++ V G DI+ F         +           +P      +      
Sbjct: 503 NTEALKTFH-PTNVLVSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFNTVYMTGLIRDE 561

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 562 EGQKMSKSKGNVLDPLDMIDGISLENLLEKRTGNMMQPQMAEKIAKRTRKEFPEGIEAHG 621

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  ++ D       
Sbjct: 622 TDALRFTLAALASTGRDINWDMKRL--SGYRNFCNKLWN-ASRFVLMNTEEQDCGYQGGE 678

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  IL+  +  ++  RE + N     A   +         D Y +  KP  + K
Sbjct: 679 MTFSLADRWILAEFNNTVKAYREALDNYRFDIAAGILYEFTWNQFCDWYLELSKP-AVHK 737

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +     +  +EV+  L  L    +P +   I+  +     +  E    Q+  +
Sbjct: 738 GNDAQKRAARHTLIEVLEGLLRLAHPIIPFITETIWQRVKEVKGIEGETIMLQAFPE 794



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+ +GTD  G      
Sbjct: 41  TTKESFCIVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQSGTDHAGIATQMV 100

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           F+D+                R + + +D   + F  T ++
Sbjct: 101 VERKIAAEEGKTRHDYGRDAFIDKIWEWKAESGGNISNQMRRLGNSVDWERERF--TMDE 158

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 159 GLSKAVKEAFVRLHKEDLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 215


>gi|190894314|ref|YP_001984608.1| probable methionyl-tRNA synthetase protein [Rhizobium etli CIAT
           652]
 gi|190699975|gb|ACE94058.1| probable methionyl-tRNA synthetase protein [Rhizobium etli CIAT
           652]
          Length = 529

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 101/538 (18%), Positives = 175/538 (32%), Gaps = 68/538 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +   +  +A   PN + H+GH     ++ADV  R+HR+ G      TG DEHG      
Sbjct: 4   NQHTFFACSAPPCPNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G         +          +DI  D F+RT+ + H D    ++ ++   G +  
Sbjct: 64  ARKLGRPVDDVAHMHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLRASGYVEL 123

Query: 122 GCYSGWYSLRDEAYYNDD-------EVYKGADGQYYNAQ---------HNPVQWMEEEGY 165
                 Y    E +  D              D                 NP+     +  
Sbjct: 124 RDGEQLYCGTCEEFAADSLAVGECPACNAPTDSNLCEDCGSALQHNLLRNPIHTTCGQSL 183

Query: 166 FFRLSAYQDKLLSYYESHPEF-----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             R        L  +    +        P   + + + +++S L  L +SR  FD G+ +
Sbjct: 184 ILRPIRQVHFELEKFAPGLDHAIEASGWPESIKRKELDWLRSKLMALPMSRH-FDRGVTL 242

Query: 221 PDDPQ---YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
               +     +  W + L  Y T    L   +G+       +     +  +G+D   ++ 
Sbjct: 243 NYPVEVAGQTLMTWFEGLWCYETGIERLCKQNGADLDDTMRNASTRLVFFMGQDNRFYYT 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           I   A L S    +P       F   +G K S S  + +   EV  ++  + LRY+L   
Sbjct: 303 IGVTASLFSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWADEVAADIDTNVLRYYLASL 362

Query: 333 IACG--KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  D  +  +GL +               R+    L+ Y G   T  A   + E  
Sbjct: 363 AKPFGANDNDFLIEGLLQTAARI----------RAFETALRKYAGCNETLTADKLTVEQ- 411

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
               +  ++   E +Q+  +  A+  + +                       RA T   V
Sbjct: 412 ----NHNVKRYSEAVQDLRVWDAMDAIDAFFDVASF---------------SRADT--SV 450

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PIF 507
           +   +     LL    P LA +     F A            ++P   L K  D P+F
Sbjct: 451 SAAEVSVFLSLLNPVTPMLAARYGAFFFGAGWRPGLD--GGTIRPSTGLRKPVDFPLF 506


>gi|22125087|ref|NP_668510.1| leucyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440933|ref|NP_992472.1| leucyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51595450|ref|YP_069641.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108808480|ref|YP_652396.1| leucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811259|ref|YP_647026.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599906|ref|YP_001163982.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365489|ref|ZP_01887524.1| leucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153948754|ref|YP_001401888.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165925236|ref|ZP_02221068.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937695|ref|ZP_02226257.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008282|ref|ZP_02229180.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212331|ref|ZP_02238366.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399181|ref|ZP_02304705.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422508|ref|ZP_02314261.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423629|ref|ZP_02315382.1| leucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468416|ref|ZP_02333120.1| leucyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|186894481|ref|YP_001871593.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929691|ref|YP_002347566.1| leucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838156|ref|ZP_04458315.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895948|ref|ZP_04511118.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898733|ref|ZP_04513878.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901496|ref|ZP_04516618.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489682|ref|ZP_06206756.1| leucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294504414|ref|YP_003568476.1| leucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|29427531|sp|Q8ZDF8|SYL_YERPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|60390684|sp|Q66DE3|SYL_YERPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123072690|sp|Q1C521|SYL_YERPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123246629|sp|Q1CKQ4|SYL_YERPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231654|sp|A4TNZ7|SYL_YERPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166980082|sp|A7FKW0|SYL_YERP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238691433|sp|B2K886|SYL_YERPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21957941|gb|AAM84761.1|AE013721_9 leucine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435792|gb|AAS61349.1| leucyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51588732|emb|CAH20343.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108774907|gb|ABG17426.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780393|gb|ABG14451.1| leucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348302|emb|CAL21233.1| leucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211602|gb|ABP41009.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291902|gb|EDM41976.1| leucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152960249|gb|ABS47710.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|165914445|gb|EDR33060.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922843|gb|EDR39994.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992664|gb|EDR44965.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206262|gb|EDR50742.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958522|gb|EDR55543.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051685|gb|EDR63093.1| leucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057799|gb|EDR67545.1| leucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186697507|gb|ACC88136.1| leucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229681425|gb|EEO77519.1| leucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688281|gb|EEO80352.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694522|gb|EEO84569.1| leucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700871|gb|EEO88900.1| leucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362596|gb|ACY59317.1| leucyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262366400|gb|ACY62957.1| leucyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338186|gb|EFA48963.1| leucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354873|gb|ADE65214.1| leucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016187|gb|ADV99758.1| leucyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 860

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G   + D+  S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                 + TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LMQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|162139459|ref|YP_001173543.2| valyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 944

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 130/394 (32%), Gaps = 77/394 (19%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +K ++  ES     +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEKAIAAVESGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                             + ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
               +  K    P D+ V G DI+ F    +   +  L+  +P             +G+K
Sbjct: 487 PQQTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLSTHLTGQIPFKTVYVHGLVRDGQGQK 545

Query: 303 ISKSLGNVIDPIEVIE-------------------------------------EVGVDAL 325
           +SKS GNV+DP+++++                                       G DAL
Sbjct: 546 MSKSKGNVLDPLDIVDGITLDELLTKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDAL 605

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+      + G+D  +D   ++     +  N I N  +           G+   P   + 
Sbjct: 606 RFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAANFVFENTEGKDTGVNGEPVELSS 663

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-D 442
            D  I+S   R   E+   ++      A   +   + +     Y +  KP    +T   +
Sbjct: 664 VDRWIISALQRTEAEVTRQLEAFRFDLAAQALYEFIWDEYCAWYLELVKPLLWDETASVE 723

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R        V V+     L   F+P +  +I+  
Sbjct: 724 RQRGTRRTLVRVLETALRLAHPFMPFITEEIWQR 757



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E   I           H+GH +   I D L R+ R+ G + L+  GTD  G         
Sbjct: 31  EPYTIMIPPPNVTGSLHMGHGFNNAIMDALIRWRRMQGRNTLWQPGTDHAGIATQMVVER 90

Query: 60  --------------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHD 104
                         +         K     N  R  R +   +D S + F  T +    +
Sbjct: 91  QLAAQGTSRHDLGREKFLEKVWQWKEESGGNITRQIRRLGSSVDWSRERF--TMDDGLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 149 AVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|317484769|ref|ZP_07943668.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923976|gb|EFV45163.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 836

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 6/181 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++K Y+     YP+   H+GH     I DV+ARF R+ G +V+   G D  G     A
Sbjct: 32  KDKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKRMQGFNVMHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   V+   N  N R     L  SY  D  + T ++ ++   ++ + +  +KG +
Sbjct: 92  AIKHNIHPSVWTHANIDNMRAQLKRLGYSYDWDREVATCDEPYYRWEQLFFLRWLEKGLV 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   S  +         +++V  G           PV   E   +F +++ Y D+LL+ 
Sbjct: 152 YRKKASQNWCPHCNTVLANEQVVDG----LCWRCDTPVVQKELTQWFLKITDYADELLAD 207

Query: 180 Y 180
            
Sbjct: 208 L 208



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 120/374 (32%), Gaps = 40/374 (10%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-YYESHPEFILPIERRNE 195
           N          Q Y     PV + +  G            L    ++H +   P+    E
Sbjct: 422 NWRLRDWNISRQRYWGAPIPVVYCDTCGMVPVPEDQLPVRLPLDVQTHTDGKSPLPHTPE 481

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             +           +        K   D              Y          D    ++
Sbjct: 482 FYNC----------TCPKCGGAAKRETDTMDTFVESSWYFARYTDARNDKAPFDMEALRY 531

Query: 256 W-PADLHVIGKDILRFHAIYWPAFLLSAN--LPLPKKV-------FSHGFILHKGEKISK 305
           W   D ++ G +    H +Y   F          PK++        + G +L  G K+SK
Sbjct: 532 WLSVDQYIGGVEHAILHLLYARFFTKVLRDLGYFPKEIDEPFANLLTQGMVLKDGSKMSK 591

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN +DP E+I + G D +R F +      +D  +   G++    +   N I  L + +
Sbjct: 592 SKGNTVDPTEMIAKYGADTVRLFCLFAAPPERDFDWSDTGIEGA--SRFLNRIWRLYADT 649

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEV 424
             ++            A T + + +       +++  E++      + A+A ++ LV+ +
Sbjct: 650 CEVLSPVGACSSTAADATTAAAKEVRLKEHLTVKKAGEDIGNRYQFNTAIAAIMELVNAL 709

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                      L K           +    +  +  LL    P +  ++++ L  A    
Sbjct: 710 ----------YLAKDELATTEEGRKILSSAMATVLTLLAPITPHVCEELWEDLGHA---- 755

Query: 485 CFQSLDQRLKPGFM 498
             +S+DQ   P + 
Sbjct: 756 --RSIDQEPWPEWK 767


>gi|162421444|ref|YP_001606329.1| leucyl-tRNA synthetase [Yersinia pestis Angola]
 gi|238687322|sp|A9R6Z0|SYL_YERPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|162354259|gb|ABX88207.1| leucyl-tRNA synthetase [Yersinia pestis Angola]
          Length = 860

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYAEQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G   + D+  S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVDIVFDVVDSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R                 + TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLAFDHTAKGAVKPLDIASLTEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LMQEALLAVVRMLYPFTPHVCFSLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|22124656|ref|NP_668079.1| valyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440493|ref|NP_992032.1| valyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108808935|ref|YP_652851.1| valyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108810810|ref|YP_646577.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600507|ref|YP_001164583.1| valyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|153997515|ref|ZP_02022615.1| valyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418871|ref|YP_001608336.1| valyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165925800|ref|ZP_02221632.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936824|ref|ZP_02225391.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010187|ref|ZP_02231085.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214319|ref|ZP_02240354.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398378|ref|ZP_02303902.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420487|ref|ZP_02312240.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423189|ref|ZP_02314942.1| valyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218930459|ref|YP_002348334.1| valyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229839087|ref|ZP_04459246.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896575|ref|ZP_04511742.1| valyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899650|ref|ZP_04514791.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901013|ref|ZP_04516137.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489193|ref|ZP_06206267.1| valine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294505147|ref|YP_003569209.1| valyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81516753|sp|Q8ZBH1|SYV_YERPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21957465|gb|AAM84330.1|AE013676_3 valine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435350|gb|AAS60909.1| valyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108774458|gb|ABG16977.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780848|gb|ABG14906.1| valyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115349070|emb|CAL22032.1| valyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212203|gb|ABP41610.1| valyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289152|gb|EDM39232.1| valyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351686|gb|ABX85634.1| valyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165915473|gb|EDR34083.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922412|gb|EDR39589.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991094|gb|EDR43395.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204551|gb|EDR49031.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961293|gb|EDR57314.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050882|gb|EDR62290.1| valyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057359|gb|EDR67105.1| valyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229682352|gb|EEO78444.1| valyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229687142|gb|EEO79217.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695453|gb|EEO85500.1| valyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700353|gb|EEO88385.1| valyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262363209|gb|ACY59930.1| valyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262367140|gb|ACY63697.1| valyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270337697|gb|EFA48474.1| valine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294355606|gb|ADE65947.1| valyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016646|gb|ADW00218.1| valyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 965

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++   +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 388 IEPMLTDQWYVHTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ +
Sbjct: 446 GHRIPAWYDEQGNVYVGRDEAEVRRDNNLGAEVALRQDEDVLDTWFSSGLWTFSTLGWPE 505

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 506 QTDALKTFH-PTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDD 564

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 565 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 624

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 625 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 681

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE M       A   +         D Y +  KP  +  
Sbjct: 682 MVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKP-VMNS 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  ++V+  L  L    +P +   I+  
Sbjct: 741 GSEAELRGTRHTLIQVLEALLRLAHPIIPYITETIWQR 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 44  TSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 103

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 104 VERKIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQMRRLGNSVDWERERF--TMDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 162 GLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 218


>gi|261341263|ref|ZP_05969121.1| leucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288316567|gb|EFC55505.1| leucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 860

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 102/309 (33%), Gaps = 74/309 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPQYQEGMLDADAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAKDAEGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 677 VYEHTSQGDAPTLNVAALTEDQQALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P ++  ++  L      +
Sbjct: 735 ----------KLAKA-PQEGEQDRALMREALLAVVRMLNPFTPHVSFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQ 491
           N  +   D+
Sbjct: 784 NAPWPVADE 792


>gi|238755065|ref|ZP_04616413.1| Leucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706769|gb|EEP99138.1| Leucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 860

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G          + V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDSKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLESWPEQVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V                 TE  +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLVFDHSHKGTTQPLVVAELTEDQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LMQEALLAVVRMLYPFTPHVCFTLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|46204292|ref|ZP_00050208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 159

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 86/156 (55%), Positives = 104/156 (66%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M      Y++T I Y N +PHIGHAY  +  DVLARF RLDG DV F TGTDEHGQK+ K
Sbjct: 1   MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +A+  GVT K   DQNS NFR++A +L  + DDFIRTTE+RH   C+ LW K+  KGDIY
Sbjct: 61  SAEAFGVTPKALADQNSANFRELAKILGCTNDDFIRTTEERHKVACQALWDKLLAKGDIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            G Y GWYS+RDEA+Y +DE+ KG  G        P
Sbjct: 121 LGAYEGWYSVRDEAFYAEDELVKGEGGSKLAPTARP 156


>gi|123967106|ref|YP_001012187.1| valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123201472|gb|ABM73080.1| Valyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 918

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 142/386 (36%), Gaps = 25/386 (6%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              +    +  Y +   N   W      ++        +L + E   +   P        
Sbjct: 390 PTFIPNRWEKVYKDWLDNINDWCISRQLWWGHQIPAWYILKHSEDSIDQNTP-------Y 442

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++  + L+ + K F    ++  D   ++  W  +     +T G+ +  D    K++P
Sbjct: 443 IVARNEKEALNKATKEFGADFQLIRDKD-VLDTWFSSGLWPFSTLGWPNVNDEDFKKWYP 501

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V G DI+ F    +       +  +P               +K+SKS GN IDP+ 
Sbjct: 502 NSVLVTGFDIIFFWVARMTMMGKTFTNKIPFKDVYIHGLVRDENNKKMSKSAGNGIDPLL 561

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSV--S 367
           +I++ G DALR+ L+RE+A  G+D   D D           + + AN + N     +   
Sbjct: 562 LIDKYGSDALRFALIREVAGAGQDIRLDFDRKNDTSSTVEASRNFANKLWNATKFVLINK 621

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
              ++Y         F  SD+ ILS  +++  ++   +    +  A   +         D
Sbjct: 622 TFSENYLLSESDEKYFQLSDKWILSKLNQLNSKVSNLLIEYKLGEAAKLLYEFTWNDFCD 681

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K     K   +R      + ++V+  + +++  F+P +  +++  L +  E   
Sbjct: 682 WYVEFSKQKFSNKELQNR-QISEKILIKVLSDVLVMMHPFMPHITEELWHALQLKPEQTL 740

Query: 486 FQSLDQRLKPG----FMLHKTFDPIF 507
                  +         + K+F  +F
Sbjct: 741 LSLQQWPVVEKKHINHHIDKSFQELF 766



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + DV+ RF RL G +VL   GTD     +    + 
Sbjct: 41  EPFCIVIPPPNVTGSLHMGHAFNSSLIDVIIRFQRLLGKNVLCLPGTDHASIAVQTILEK 100

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                 ++ +Q+          +  S D      T +++ ++  
Sbjct: 101 QLKNEGKNSGDIGREDFLKRAWIWKEQSGGKIVSQLKRIGYSVDWERERFTLDEKLNEAV 160

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + DK  IY+G Y   +    ++  +D EV       +      P+
Sbjct: 161 IEAFNILHDKKLIYRGEYLVNWCPASQSAVSDLEVEMQEVNGHLWHFKYPL 211


>gi|307130050|ref|YP_003882066.1| leucyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306527579|gb|ADM97509.1| leucyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 860

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIEYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G     D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFDVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 70/186 (37%), Gaps = 26/186 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++         G   
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVE---------GANR 668

Query: 361 LVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R    +          P    A TE  +++     + + ++ +++  +   + A+A 
Sbjct: 669 FLKRVWKQVYDHTGKGAAQPLDTAALTEDQKALRRDLHKTIAKVTDDIGRRQTFNTAIAA 728

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L++            +L K + +       +T E +  +  +L  F P     ++  
Sbjct: 729 IMELMN------------KLAKASQESEQD-RALTQETLLAVVRMLYPFTPHACFVLWRE 775

Query: 477 LFVADE 482
           L    +
Sbjct: 776 LQGEGD 781


>gi|189083242|sp|A8AJG0|SYL_CITK8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 101/310 (32%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPQYNEGMLDPEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       +       A +E  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 677 VYEHTAKGEVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P     +++ L      +
Sbjct: 735 ----------KLAKA-PQEGEQDRALMQEALLAVVRMLNPFTPHACFTLWEALKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D +
Sbjct: 784 NAPWPVADDK 793


>gi|188534474|ref|YP_001908271.1| leucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689681|sp|B2VBM4|SYL_ERWT9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|188029516|emb|CAO97393.1| Leucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 860

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDMTVLANEQVIDG----CCWRCDSKVERKEIPQWFVKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLESWPEQVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 81/195 (41%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +    +     A  +  +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLAFEHTEKGPTVALDLDALNDEQKALRRDLHKTISKVSDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   ++T  DRA     +  E +  +  +L  F P  +  ++  L  
Sbjct: 732 LMNKL-----ARAP---QETEQDRA-----LMQEALLAVVRMLNPFTPHASFVLWQALGG 778

Query: 480 ADE--NRCFQSLDQR 492
           A E  N  +   ++ 
Sbjct: 779 AGEIDNAPWPQAEEA 793


>gi|21493003|ref|NP_660078.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|21467416|gb|AAM55079.1| probable methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 529

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 101/538 (18%), Positives = 175/538 (32%), Gaps = 68/538 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +   +  +A   PN + H+GH     ++ADV  R+HR+ G      TG DEHG      
Sbjct: 4   NQHTFFACSAPPCPNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G         +          +DI  D F+RT+ + H D    ++ ++   G +  
Sbjct: 64  ARKLGRPVDDVAHMHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLRASGYVEL 123

Query: 122 GCYSGWYSLRDEAYYNDD-------EVYKGADGQYYNAQ---------HNPVQWMEEEGY 165
                 Y    E +  D              D                 NP+     +  
Sbjct: 124 RDGEQLYCGTCEEFAADSLAVGECPACNAPTDSNLCEDCGSALQHNLLRNPIHTTCGQSL 183

Query: 166 FFRLSAYQDKLLSYYESHPEF-----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
             R        L  +    +        P   + + + +++S L  L +SR  FD G+ +
Sbjct: 184 ILRPIRQVHFELEKFAPGLDHAIEASGWPESIKRKELDWLRSKLMALPMSRH-FDRGVTL 242

Query: 221 PDDPQ---YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHA 272
               +     +  W + L  Y T    L   +G+       +     +  +G+D   ++ 
Sbjct: 243 NSPVEVAGQTLMTWFEGLWCYETGIERLCKQNGADLDDTMRNASTRLVFFMGQDNRFYYT 302

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           I   A L S    +P       F   +G K S S  + +   EV  ++  + LRY+L   
Sbjct: 303 IGVTASLFSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWADEVAADIDTNVLRYYLASI 362

Query: 333 IACG--KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  D  +  +GL +               R+    L+ Y G   T  A   + E  
Sbjct: 363 AKPFGANDNDFLIEGLLQTAARI----------RAFETALRKYAGCNETLTADKLTVEQ- 411

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
               +  ++   E +Q+  +  A+  + +                       RA T   V
Sbjct: 412 ----NHNVKRYSEAVQDLRVWDAMDAIDAFFDVASF---------------SRADT--SV 450

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PIF 507
           +   +     LL    P LA +     F A            ++P   L K  D P+F
Sbjct: 451 SAAEVSVFLSLLNPVTPMLAARYGAFFFGAGWRPGLD--GGTIRPSTGLRKPVDFPLF 506


>gi|91774107|ref|YP_566799.1| valyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91713122|gb|ABE53049.1| Valyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 865

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 134/381 (35%), Gaps = 21/381 (5%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE------EGY 165
            + ++  + +     W         ++ + +   D        + ++W+ E      + +
Sbjct: 321 NLYEQNTLKQNVGMCWRCKTPIEILSEKQWFVKIDNDEILRTADEIEWLPEYMKVRLQNW 380

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK---DLSLSRKTFDWGIKIPD 222
              +            + P  +   ++  EV+   +  L               G +  +
Sbjct: 381 TNTMEWDWCISRQRIFATPIPVWYCKKCGEVMVAEEEWLPIDPTQQQPPVACKCGCEDFE 440

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
             + ++  W+D+    L   G+L      K    P  L   G DI+R  + Y    +  L
Sbjct: 441 PEEDVLDTWMDSSITALHVAGWLS----DKEMRNPTQLRPQGHDIIRTWSFYSILRSMAL 496

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    + +   +   G K+SKSLGNVI P EVI++   DA R +     + G D  
Sbjct: 497 TGKKPWESILVNGMVLGEDGHKMSKSLGNVISPEEVIKDHSADAFRQWAAVGGSTGSDVM 556

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQ 399
           +    +     +     + ++   S+S I  +  +     P      D+ +LS  +R++ 
Sbjct: 557 FRWKDVVSA--SRFFTKMWSIYRFSMSHIEDELAEITSGKPEKLNVIDKWLLSNLNRLIS 614

Query: 400 EIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +  ++       A   +     E   D Y +  K   L   + +   +  Y     I  
Sbjct: 615 SVTASLDAYQFDEAYKSIRGFAWETLADNYIELVKS-RLYGEDKEARRSAQYTLYVAIDG 673

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L+ +L  F P  A +++  + 
Sbjct: 674 LSRMLAPFAPFFAEEMYSRIG 694



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  I T   YP    HIG++      D +AR+ R+ G +V+F  G D HG      
Sbjct: 32  ESRPQYIIDTPPPYPTGNFHIGNSLNWCYIDFVARYKRMQGFNVMFPQGWDCHGLPTEVK 91

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                  N    R     L  S D  +   T E  ++   
Sbjct: 92  VEENHGITKNQVPRTEFRQMCEELTVGNIDKMRKTMHRLGFSTDWSNEFVTMEPEYYVKT 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           +  + K+ D   +Y+  +   +  R E      EV   
Sbjct: 152 QTSFVKMKDMDRVYQSEHPVNWCPRCETAIAFAEVEYD 189


>gi|284044106|ref|YP_003394446.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948327|gb|ADB51071.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 854

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 69/350 (19%), Positives = 124/350 (35%), Gaps = 36/350 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +    +F R+       +   +     I P  R   V       ++   +SR+   W
Sbjct: 356 IEPLISLQWFMRMDELAQPAIDAVKDGRVRIHPE-RWTRVYLDWMENIRPWCVSRQ-LWW 413

Query: 217 G--IKIPD-------------------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G  I +                     DP  ++  W  +      T G+       KA F
Sbjct: 414 GHQIPVWYRGEETYVGTTPPEGDGWERDPD-VLDTWFSSALWPFATLGWPRETPELKA-F 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D+    +DIL      +       +  +P              G ++SKSLG  IDP
Sbjct: 472 YPTDVLSTARDILFLWVARMIMMGLEFAGEVPFRDVYIHSVIQAPDGRRMSKSLGTGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++ IE  G D +R+ L+   +  +D  Y  + +++     LAN + N  SR V   +   
Sbjct: 532 LDEIESHGADGVRFGLLAMSSS-QDVRYSAEKVQQGQ--QLANKLWN-ASRLVLTRIDPE 587

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                 P A    D  ILS  +    E+ E ++      A+  +   V     D Y +  
Sbjct: 588 ARPASRPQAV--EDRWILSRLAHTRAEVAERIEAYDFSHAVLGLYDFVYGELCDWYLELV 645

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           KP  L +        +    + V+ +   L    +P +  +I+  +  A+
Sbjct: 646 KP-RLYEAEGQERDDLSATLLHVLTETLQLAHPVIPFVTEEIWSHVPGAE 694



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I+          H+GHA    I D L RF+R  G    +  GTD  G    K  + 
Sbjct: 39  ENYSIAVPPPNVTGALHMGHALNGSIQDALIRFNRARGKRAKWILGTDHAGIATQKQVEK 98

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
                                  + +Q           L  S  YDD   T ++R+ +  
Sbjct: 99  QLAGEGSGREQIGREAFTERVWQWREQYGDTIVGQFQRLGASLDYDDERFTLDERYVEAV 158

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + ++  + +KG IY+  Y   +     +  +D EV +  +
Sbjct: 159 QKVFVDLYEKGLIYRDNYMVNWDPGSRSAISDLEVEEREE 198


>gi|308048542|ref|YP_003912108.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630732|gb|ADN75034.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 859

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  SKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +    +L   YD    + T +  ++   +  + ++ +KG IY
Sbjct: 91  IKNKSAPGPWTYENIEYMKGQLKMLGFGYDWSRELATCKPDYYRWEQWFFTELYNKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G           PV   E   +F +++ Y D+LLS  
Sbjct: 151 KKTSAVNWCENDQTVLANEQVVDG----CCWRCDTPVVQKEIPQWFIKITDYADQLLSDM 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 207 DQLEGWPEMVKTMQRNWIGRSEGI 230



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 80/196 (40%), Gaps = 28/196 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP E++E+ G D +R F++          + + G++         G    
Sbjct: 618 KMSKSKNNGIDPQEMVEKYGADTVRLFMMFAAPPELTLEWQESGVE---------GALRF 668

Query: 362 VSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           + R   +  +             +     +++     + + +I ++   +   + A+A V
Sbjct: 669 LKRLWKLSHEHVAKGPAPKLDIASLNNDQKALRRALHQTIAKITDDYGRRQTFNTAIAAV 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++++ +      P   ++++ DRA     +  E +  + +LL    P  ++ ++  L
Sbjct: 729 MELMNKLTK-----AP---QESDNDRA-----LMQEALDAVVLLLYPITPHTSHALYLAL 775

Query: 478 FVAD--ENRCFQSLDQ 491
             +   +   +   DQ
Sbjct: 776 GHSGNVDEAQWPVADQ 791


>gi|15679374|ref|NP_276491.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334357|sp|O27428|SYI_METTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2622484|gb|AAB85852.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 1044

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 79/415 (19%), Positives = 147/415 (35%), Gaps = 39/415 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G  ++      Y   ++ +    E+      +    Q   V     E  F       
Sbjct: 384 HRYGFCWRCKTPIIYLATEQWFLKITEIKDKMLRELDRVQW--VPSWAGESRFRNWIENA 441

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSG------------------LKDLSLSRKTFD 215
                  + +    +PI    E  S    G                  +    + R   +
Sbjct: 442 RDWTISRQRYWGIPIPIWICEECDSIHVVGSIDELRELAVEGELEGDFIHRPHVDRIVLE 501

Query: 216 WGI---KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            G    ++   P  ++ VWID+         Y    +    +++P D    G D     F
Sbjct: 502 CGECGGRMKRTPD-VLDVWIDSGVAGWAALHYPSETE-LFREWFPYDFITEGHDQTRGWF 559

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++      +    +P  + +     +  +G K+SKSLGNV++P +VIE+ G D LR++L+
Sbjct: 560 YSQLGCGVIALDEVPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLL 619

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDE 388
            E    +D  +  D L+  VN          V  +  M L  +     +    +  + D 
Sbjct: 620 WENKPWEDLKFVWDELRN-VNKMFNILWNVYVFATTYMSLDRFQPGDHSAEDLSFRDEDR 678

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRA 444
            ILS  + V  ++ E ++N   HRA  ++   +       Y      + W +++ +PD+ 
Sbjct: 679 WILSRINSVALKVTEAIENLHFHRATREIHDFIVEDLSRWYIRLIRSRTW-IERDDPDKL 737

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS---LDQRLKPG 496
           +   +    V++ L + L    P +   I+  L    E    +S   LD  L  G
Sbjct: 738 AA-YHTLYTVLKTLIVTLSPMAPHVCEDIYQNLVRGAEPDSPESIHMLDWILDEG 791



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 20/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R +        Y + + H+G A+  I+ D   RF  + G +V    G D HG  I   
Sbjct: 37  EDRPRYSFLDGPPYCSGRIHLGTAWNKIMKDTYLRFKSMKGFNVRRQPGWDTHGLPIEHK 96

Query: 62  ------------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
                              +      + F  +N          L +   +DD   T +  
Sbjct: 97  VEGLLGVRSKKDIEDKIGIEEFVNKCREFAVENKAVMTGQFQRLGVWMDWDDPYVTFDPA 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++C    K+  +K  + +      +  R E      E+              PV
Sbjct: 157 YMESCWWTLKRAHEKDLLVRDLRVITWCPRCETALALAEIDYHDKEDPSIYVKFPV 212


>gi|259907063|ref|YP_002647419.1| valyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962685|emb|CAX54140.1| Valyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283476863|emb|CAY72709.1| valyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 951

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 142/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAAGNVYVARSEEEARAENNLGADVVLTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N    +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTAALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLQDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEHDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            A + +D  IL+  +R ++  RE +       A   +         D Y +  KP  +  
Sbjct: 668 LALSLADRWILAEFNRTVKAYREALDCYRFDIAANILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +        V V+  L  L    +P +   I+  +     ++D+    Q + +
Sbjct: 727 GNEAQLRGTRNTLVNVLEALLRLAHPIIPFITETIWQRVKVLKNISDDTIMLQPMPE 783



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|254509830|ref|ZP_05121897.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533541|gb|EEE36529.1| valyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 1022

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 22/267 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +  DP  ++  W  +    + T G+ +  +    +++P D+ + G DIL F    W A +
Sbjct: 582 LYRDPD-VLDTWFSSGLWPIGTLGWPEQTE-ELERYFPTDVLITGFDILFF----WVARM 635

Query: 280 LSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +   L +  +V  H   L       KG+K+SK+ GNVIDP+E+++E G DALR+      
Sbjct: 636 MMMQLAVVDQVPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADALRFTNASMA 695

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDES 389
           A G      ++ +      +    + N V R   M     D                +  
Sbjct: 696 AIGGVLKLSRERI--TGYRNFGTKLWNAV-RFAEMNEVFTDAAPQLDVTDLKPKAAVNRW 752

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTV 447
           I+   +RV +E+   +++   + A   + + V     D Y +  KP  L+  +    +  
Sbjct: 753 IIGETARVREEVDAALESYRFNDAANGLYAFVWGKVCDWYVELSKP-LLQGDDAAAQAET 811

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
                 V+ Q  +LL   +P +  +++
Sbjct: 812 RATMRWVLDQCMVLLHPIMPFITEELW 838



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 59/196 (30%), Gaps = 34/196 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GHA+   + D+L R+HR+ G D L+  G D  G       +    
Sbjct: 39  TIMIPPPNVTGALHVGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMQVEKMLA 98

Query: 68  TT-----------------KVFVDQNSRNFRDMADVLDISYD---------------DFI 95
            T                   +  +      +    L  S D                  
Sbjct: 99  ATGQPGRRELGREAFLDKVWEWKGEYGGTIIEQLKRLGSSCDWSRNAFTMAGAPRDPRTG 158

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++ ++ +KG IY+G     +    E   +D EV       +      
Sbjct: 159 HENSANFHDAVIKVFVEMYEKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 218

Query: 156 PVQWMEEEGYFFRLSA 171
           P+   E   Y  +   
Sbjct: 219 PLAGGETYEYLEKDED 234


>gi|238786082|ref|ZP_04630040.1| Leucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713021|gb|EEQ05075.1| Leucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 860

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 74/189 (39%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V                 T   +S+     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLVFDHTAKGATAPLDIANLTNEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QETEQDRA-----LLQEALLAVVRMLYPFTPHVCFTLWQALGG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|317009763|gb|ADU80343.1| valyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 872

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 78/391 (19%), Positives = 137/391 (35%), Gaps = 53/391 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDAPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAVSY-LKLKQEVFKDKERLDEYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL-FVADENRC 485
           ++   LL  F+P ++  ++  L     EN C
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTELENTC 704



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKGKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNAGVTT---------KVFVDQNS-----------RNFRDMADVLDISYDDFIRTT 98
               +   ++          + FV +                + +      S   F  T 
Sbjct: 94  QNVVEKQLLSQGIKKEYLGREEFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDG 186


>gi|203284634|ref|YP_002222374.1| valyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201084077|gb|ACH93668.1| valyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 877

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 134/378 (35%), Gaps = 44/378 (11%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+ +  D + +K   G  + +    ++      +F ++    D  L           P 
Sbjct: 327 RDKEFLIDVKNHKHQVGHCHRSG-EVIEPYLSNQWFVKMKPLADAALQALSDGKIRFYPR 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD------------------------- 223
           +  N       S +KD  +SR+   WG  I    D                         
Sbjct: 386 KWENT-YKHWLSNIKDWCISRQLV-WGHRIPAWYDVQTGEIVVSEFDPSLSKNYSGRSFV 443

Query: 224 -PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
               ++  W  +     ++ G+ D     K  ++P    V   DI+ F    +       
Sbjct: 444 RDSDVLDTWFSSWLWPFSSLGWPDVTFDLK-NYYPTTTLVTAYDIIFFWVARMVMAGLEF 502

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P      +      KG+K+SKSLGN IDP+++IE+ G DALR+ L      G+D  
Sbjct: 503 MGEVPFRDIYITPLLRDKKGQKMSKSLGNGIDPLKIIEQYGSDALRFTLSFLSVQGQDLN 562

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQ 399
            D                 N V  +   IL +    ++     F + D+ +++  +  + 
Sbjct: 563 IDTKDFM------FGAKFANKVFNASKFILSNLKGRLVLDSLEFDDIDKWLITRLNATVA 616

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            I  + +N   + A   V         D Y +  K   L   + D  +  +   +  +++
Sbjct: 617 VIDWSFENYKYNEATKAVYEFFWNDFCDWYIEISK-INLCSDDFDLQNITISKLIFFLKE 675

Query: 458 LAILLQAFVPKLANKIFD 475
             +++  F+P +  +I+ 
Sbjct: 676 SLLIMHPFIPFITEEIYS 693



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 18/156 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    + D+L R+ R+ G + L+  GTD  G       +  
Sbjct: 37  KFSMVAPPPNVTGILHMGHALNFTLQDILVRYKRMKGFNTLWLFGTDHAGIATQTVFEKQ 96

Query: 66  ---------GVTTKVFV-------DQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                      + + F+       +++ +   +  + L  SYD      T +        
Sbjct: 97  LRELGKSKDDFSREEFIEGIFELKNKHRKIIVNQVEKLGASYDHLRERFTLDDGLSRAVN 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  + +KG IYKG Y         +  +D+EV  
Sbjct: 157 KVFIDLYNKGLIYKGEYLVNLDPGSGSVVSDEEVEY 192


>gi|329889452|ref|ZP_08267795.1| valyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844753|gb|EGF94317.1| valyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 1163

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 63/381 (16%), Positives = 131/381 (34%), Gaps = 16/381 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K +   GD        W + +   +Y D +V      +         +    E  +F   
Sbjct: 367 KHMVPHGDRSGVVIEPWMTDQ---WYVDAKVMAQPALKAVEDGATVFEPKSYEKIYFEWL 423

Query: 171 AYQDKLLSYYESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
              +      +      +P     N  I   ++       +   +D  + +  D   ++ 
Sbjct: 424 RNIEPWCISRQLWWGHRIPAWYGPNGEIYVAETEEDAREQAMSDYDSEVVLTQDED-VLD 482

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPL 286
            W  +     +T G+ +  +    +F+P    V   DI+ F     +      +   +P 
Sbjct: 483 TWFSSALWPFSTMGWPEKTE-DLERFYPTSDLVTAADIIFFWVARMMMMGIHFMDGEVPF 541

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            + + +      KG+K+SKS GNVIDP+ +I+E+G D LR+ +       +D    K  +
Sbjct: 542 KRVIINGLVRDEKGQKMSKSKGNVIDPLGIIDELGADPLRFTMAILSG-TRDIKLSKQRI 600

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +     +    + N    S     +  +G  P     T  +  I    ++  +++ + ++
Sbjct: 601 EG--YRNFGTKLWNAARFSQMNEARRVEGFDPAAVQQT-INRWIRGELTKAERQVSDAIE 657

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 A   +   +     D Y +  KP      +    +    +T   I Q   LL  
Sbjct: 658 GGRFDDAAGTLYRFIWNVFCDWYLELAKP-VFNGADEAAKAETRAMTAWTIDQTLKLLHP 716

Query: 465 FVPKLANKIFDILFVADENRC 485
            +P +  +++  L      R 
Sbjct: 717 VMPYITEELWAELGREGPARD 737



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 24/168 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I           HIGHA    + D+LAR+HR+ G  VL+  GTD  G       +   
Sbjct: 40  YSIVIPPPNVTGSLHIGHALNNTLQDILARYHRMKGKAVLWLPGTDHAGIATQMVVERKL 99

Query: 66  --------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                             KV+  +        R  R +    D S + F  T ++  +  
Sbjct: 100 AAEGNIGRRDMGRDAFIEKVWEWKAESGGTIVRQLRRLGSSCDWSRERF--TLDEGLNAA 157

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNA 152
            R ++ ++   G IY+      +    +   +D EV +   DG Y++ 
Sbjct: 158 VRKVFVQLHKDGLIYRDKRLVNWDPHFQTAISDLEVEQKEVDGAYWHF 205


>gi|313200359|ref|YP_004039017.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439675|gb|ADQ83781.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 826

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+ + H+GH     I DVL+RFHR+ G +V+   G D  G     A
Sbjct: 30  SDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMKGFNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  + +       L I +   I T +  ++   + L+ ++  KG I
Sbjct: 90  AIKNNVAPAGWTYSNIEHMKSQLKSLGLGIDWQREIATCKPEYYRWEQWLFTELFKKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  +   YF +++AY D+LL+ 
Sbjct: 150 YKKTATVNWDPVDQTVLANEQVIDG----RGWRSGAIVEKRDIPQYFMKITAYADELLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLEGWPEQVKTMQRNWIGKSYG 229



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 100/268 (37%), Gaps = 40/268 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDN--PDGSKAKFW-PADLHVIGKDILRFHAIY-------WPA 277
           +  + ++   Y     +  +      +A +W P D ++ G +    H +Y          
Sbjct: 497 LDTFFESSWYYARYASFDADKAMVDERANYWLPVDQYIGGIEHAILHLLYARFFNKLMRD 556

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L  N     K+ + G +L  G K+SKS GN +DP  +IE+ G D  R F++      +
Sbjct: 557 VGLLKNDEPFNKLLTQGMVLKDGSKMSKSKGNTVDPQALIEQYGADTARLFMMFAAPPEQ 616

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-------MIPTPGAFTESDESI 390
              +   G++         G    + R  + +    +           + G      +++
Sbjct: 617 SLEWSDAGVE---------GAHRFLKRVWAAVAAHVEQGVVSAYSAATSTGELNAELKTL 667

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                  +++I ++   +   + A+A V+ L   ++ Y       +L+  +         
Sbjct: 668 RRQLHLTIEKISDDYGRRHAFNTAIAAVMEL---MNAY------AKLEGQDD----VTRS 714

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  EV+    +LL   VP ++  ++  L
Sbjct: 715 VRQEVLEHAILLLSPIVPHISQALWSEL 742


>gi|311280454|ref|YP_003942685.1| leucyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749649|gb|ADO49401.1| leucyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   YD    + T    ++   +  + ++  KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 107/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKK 289
           Y          D   A +W P D+++ G +    H +Y+  F        + ++    K+
Sbjct: 503 YTCPQYQEGMLDADAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVSSDEPAKQ 562

Query: 290 VFSHGFIL--------------------------HKGE------------------KISK 305
           +   G +L                           KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPKDAIVERDEKGRIVKAKDGEGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E  G D +R F++          + + G++       AN     + + 
Sbjct: 623 SKNNGIDPQEMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRLWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V               A ++  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHNAQGPVAALNVDALSDDQQALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P        DRA     +  E +  +  +L  F P +   ++  L  A   +
Sbjct: 737 -----AKAP---TDGEQDRA-----LLQEALLAVVRMLNPFTPHICFTLWQTLGGAGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D +
Sbjct: 784 NAPWPVADDK 793


>gi|238893709|ref|YP_002918443.1| leucyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238546025|dbj|BAH62376.1| leucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 868

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 214 LDKLDHWPDTVKTMQRNWIGRSEG 237



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 100/322 (31%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 498 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 557

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 558 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 617

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 618 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 673

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       +       A +E  +++     + + ++ +++  +   +
Sbjct: 674 --ANRFLKRVWKLVYEHTTKGEVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQTFN 731

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P  + 
Sbjct: 732 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHASF 778

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 779 TLWRELNGEGDIDNAPWPVADE 800


>gi|161504177|ref|YP_001571289.1| leucyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189083145|sp|A9MKC8|SYL_SALAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160865524|gb|ABX22147.1| hypothetical protein SARI_02284 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G          + V+  E   +F +++AY D+LLS 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDSKVERKEIPQWFIKITAYADELLSD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 75/312 (24%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPA 277
                    ++++   Y   T          +K    + P D+++ G +    H +Y+  
Sbjct: 484 MRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRF 543

Query: 278 FL-------LSANLPLPKKVFSHGFIL--------------------------HKGE--- 301
           F        +  +    K++   G +L                           KG    
Sbjct: 544 FHKLMRDAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVK 603

Query: 302 ---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKS  N IDP  ++E  G D +R F++          + + G+
Sbjct: 604 AKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGV 663

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +       AN     V + V                  +  +++     + + ++ +++ 
Sbjct: 664 EG------ANRFIKRVWKLVYEHTAKGSVAALNVDTLNDDQKALRRDVHKTIAKVTDDIG 717

Query: 407 NQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +   + A+A ++ L++++     A+ P   + +  DRA     +  E +  +  +L  F
Sbjct: 718 RRQTFNTAIAAIMELMNKL-----AKAP---QDSEQDRA-----LMQEALLAVVRMLNPF 764

Query: 466 VPKLANKIFDIL 477
            P +   ++  L
Sbjct: 765 TPHVCFTLWQAL 776


>gi|293397302|ref|ZP_06641574.1| leucine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291420220|gb|EFE93477.1| leucine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP E++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V +     L+          +  E  +++     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWKLAFDHLEKGAVQPLDVASLNEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   + +  DRA     +  E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKLGR-----AP---QDSEQDRA-----LLQEALLAVVRMLYPFTPHVCFDLWQSLGG 778

Query: 480 ADENRCFQS 488
           A +      
Sbjct: 779 AGDIDTAPW 787


>gi|322833894|ref|YP_004213921.1| leucyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169095|gb|ADW74794.1| leucyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 894

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEG 229



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 113/338 (33%), Gaps = 41/338 (12%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +  Q        +   + LP+++    I      L       K     G
Sbjct: 527 FMESSWYYARYTCPQYDEGMLDPAAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMRDAG 586

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   D+P   +      L        Y     G +    PAD  V               
Sbjct: 587 LVESDEPAKRLLCQGMVL----ADAFYYTGNSGERIWVSPADAIVE-------------- 628

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 +        H  +     K+SKS  N IDP  ++++ G D +R F++       
Sbjct: 629 RDEKGRITKATDPQGHELVYAGMSKMSKSKNNGIDPQVMVDKYGADTVRLFMMFASPAEM 688

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + + G++       AN     V +      +          +  E+ + +     + 
Sbjct: 689 TLEWQESGVEG------ANRFLKRVWKLAFEHTEKGPVAALDVASLNEAQKDLRRDLHKT 742

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A ++ L++++ R      P   + +  DRA     +  E + 
Sbjct: 743 IAKVTDDIGRRQTFNTAIAAIMELMNKLGR-----AP---QDSEQDRA-----LLQESLL 789

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQR 492
            +  +L  F P +   ++  L    +     +   D++
Sbjct: 790 AVVRMLYPFTPHVCFSLWQSLQGEGDVDTAPWPQADEQ 827


>gi|227485363|ref|ZP_03915679.1| isoleucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236654|gb|EEI86669.1| isoleucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 1039

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/459 (15%), Positives = 154/459 (33%), Gaps = 33/459 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQ-NAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
           +      D+ F    D  G+      +      T   + ++ +    +     + ++   
Sbjct: 334 YQACRKYDLDFIQPVDLEGRFTETPWKGEFVFDTNEKIWRHLQEEGKVFAKETMEHNYPH 393

Query: 96  --RTTEK-RHHDTCRILWKKISDKGDIYKGCYSGWYSLR---DEAYYNDDEVYKGADGQY 149
             R      ++       +     G + +   +  +  +   D+ + N  E  K      
Sbjct: 394 CWRCHTPLIYYARPSWYIEMSKFSGKMVENNQTVNWFPQTIGDKRFGNWLENVKDWAISR 453

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 P+     E       A + +L           + + R       +K      ++
Sbjct: 454 SRYWGTPLNIWRCECGHTDTVASRAELKERAIEDISEDIELHRPYVDNVHIKCDKCGGTM 513

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADLHVIGKDIL 268
           +R               ++ VW D+         Y         K ++PAD    G D  
Sbjct: 514 TRV------------PDVLDVWFDSGAMPFAQLHYPFENKELFEKGYYPADFICEGIDQT 561

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F+++   + +     P    + +   +   G+K+SKS GN +DP  + ++ G DA+R
Sbjct: 562 RGWFYSLMAISTITMGRAPYKNVLVNDLVVDKNGQKMSKSRGNTLDPFALFDKYGADAVR 621

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD----YDGMIPTPGA 382
           ++ +          +D+ GL +  N +      N+ +        D     D        
Sbjct: 622 FYSLYVSPAWMQTKFDEKGLVEVKN-NFFRTFENVYNFFSLYAGTDGLTLADIKSFEGVK 680

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKK 438
               D  + S  + +++   E M+N   ++ + ++   V     + Y   + ++ W  + 
Sbjct: 681 VDGIDRWLYSRLNSLIKSYYEEMENFEYNKVVHEISDFVVEDLSNWYIRRNRKRFWSQEL 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+  +  +V   T +V+  L+ L+    P LA +I+  L
Sbjct: 741 TDSKK--SVYKTTYDVLLSLSKLIAPITPFLAEEIYQKL 777



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 55/159 (34%), Gaps = 19/159 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I       N +P I H     + D+ +R+  + G  VL   G D HG  +    +   
Sbjct: 44  YVIYDGPPTANGKPGIHHVIARTLKDMTSRYKNMKGYKVLKKAGWDTHGLPVEIEVEKQL 103

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCR 107
                               K  V + S  +RDM+D +   Y  D    T +  + +T  
Sbjct: 104 GFHDKNDIEQYGIEKFNHLCKESVWKYSDMWRDMSDRMAFLYDMDHPYVTMDNNYIETEW 163

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L  +   KG IY+G     Y  R        EV +G +
Sbjct: 164 WLLDQAFKKGYIYEGAKVMPYCPRCGTGLASHEVAQGYE 202


>gi|77919014|ref|YP_356829.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123729465|sp|Q3A4P8|SYL_PELCD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77545097|gb|ABA88659.1| leucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 851

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 7/228 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     I DV+ARF RL G +VL   G D  G     AA 
Sbjct: 32  REKYYLLEMFPYPSGRIHMGHVRNYSIGDVVARFKRLQGYNVLHPMGWDAFGMPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N  N R     +  SY  D  + T    ++   ++++ K+ +KG  YK
Sbjct: 92  QHKTHPGKWTYENIDNMRAQLKKMGFSYDWDREVATCHPEYYRWEQLIFLKMLEKGLAYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V   A           V+  E E +FF+++ Y  +LL    
Sbjct: 152 KSSFVNWCSECQTVLANEQVENDA----CWRCGTVVEQKELEQWFFKITDYAQELLDDTS 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
               +  P+           +G  ++       D  IK+    Q  +Y
Sbjct: 208 KLSGWPEPVLTMQRNWIGRSTG-CEIDFPVADSDLKIKVFTTRQDTLY 254



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 96/298 (32%), Gaps = 67/298 (22%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP-------------------- 276
           Y          D +    W P D ++ G +    H +Y                      
Sbjct: 509 YTCPRFEQGPVDRATVDHWLPVDQYIGGIEHAVMHLLYARFFTKVMRDLGMMAHDEPFKN 568

Query: 277 -----------AFLLSANLPLPKKVFSHGF-------ILHKGEKISKSLGNVIDPIEVIE 318
                      A         P++V               + EK+SKS  NV+DP ++I 
Sbjct: 569 LLTQGMVCMETASCPEHGWLFPEQVVEGKCVLCGATAQTGRNEKMSKSKKNVVDPDKLIL 628

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-- 376
             G D  R F +      KD  +++ G++         G    + R    +  + + +  
Sbjct: 629 SYGADTARLFSLFAAPPEKDLEWNEQGVE---------GCYRFLHRVWRAVYDNLEMISG 679

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +  P +   +  ++       ++++  ++      + A+A V+ LV+ +  +        
Sbjct: 680 VAVPASVDGAARNLRRQVHATIKKVTGDIDGRFHFNTAIASVMELVNAIYGF-------- 731

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
                 +  +    V  E +     LL  FVP +  +++  L      E   + + D+
Sbjct: 732 ------EAKAQYPGVMREALEATVRLLAPFVPHVCEELWACLGHEGGLEAAGWPAWDE 783


>gi|114319561|ref|YP_741244.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312502|sp|Q0ABN3|SYL_ALHEH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114225955|gb|ABI55754.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 864

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  REGEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGRNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    R     L  +Y  D    T +  ++   + L+ ++  KG +
Sbjct: 90  AMKHGVPPARWTRENIETMRGQLQRLGFAYDWDREFATCDPEYYRWEQWLFTRLYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  +   +F R++ Y D+LL  
Sbjct: 150 YKKTATVNWDPVDQTVLANEQVVDG----RGWRSGAVVERRDIPQWFLRITDYADELLEA 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   +            G
Sbjct: 206 LDELPGWPEQVRAMQRNWIGRSEG 229



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 69/197 (35%), Gaps = 26/197 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D +R + +      +   +    ++         G   
Sbjct: 620 EKMSKSKNNGVDPQALIDRYGADTVRLYTMFAAPPDQSLEWSDSAVE---------GAYR 670

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   ++               +  ++   +       + +  +++ +    + A+A 
Sbjct: 671 FLRRYYGLVRDHVAAGPVPALDVASLDDAARDLRRKVHETIAKASDDVGRRYTFNTAIAA 730

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L + + +   A +P          +     V  E +    ++L    P + +  +  
Sbjct: 731 VMELCNALGKA-AANEP----------SGAARAVLQEGLEAATLILAPIAPHVTHVCWQA 779

Query: 477 LFVADENRC--FQSLDQ 491
           L   +      + ++D+
Sbjct: 780 LGHDEAVIDARWPAVDE 796


>gi|259909122|ref|YP_002649478.1| leucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964744|emb|CAX56261.1| Leucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479150|emb|CAY75066.1| leuS [Erwinia pyrifoliae DSM 12163]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDMTVLANEQVIDG----CCWRCDSKVERKEIPQWFVKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLESWPEQVKTMQRNWIGRSEG 229



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 81/195 (41%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +          A  +  +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLAFEHTEKGTATALDVDALNDDQKALRRDLHKTISKVSDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   +++  DRA     +  E +  +  +L  F P ++  ++  L  
Sbjct: 732 LMNKL-----ARAP---QESTQDRA-----LMQEALLAVVRMLNPFTPHVSFVLWQALGG 778

Query: 480 ADE--NRCFQSLDQR 492
           A E  N  +   D+ 
Sbjct: 779 AGEIDNAPWPQADEA 793


>gi|283834051|ref|ZP_06353792.1| leucine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070194|gb|EFE08303.1| leucine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDNLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 74/309 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPQYNEGMLDPEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAKDAEGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A +E  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 677 VYEHTTKGDVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P +   ++  L      +
Sbjct: 735 ----------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHVCFTLWQALKGEGDID 783

Query: 483 NRCFQSLDQ 491
           N  +   D+
Sbjct: 784 NAPWPVADE 792


>gi|208779258|ref|ZP_03246604.1| leucyl-tRNA synthetase [Francisella novicida FTG]
 gi|208745058|gb|EDZ91356.1| leucyl-tRNA synthetase [Francisella novicida FTG]
          Length = 813

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +   ++           GL        T  + IK  +    +     D L  
Sbjct: 206 SKLDGWPEAVKTMQINWIGKSKGL--------TVKFKIKDSNQEIEVFTTRPDTLMG 254



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 76/483 (15%), Positives = 143/483 (29%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISGETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYDIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNRGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVTLTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN +
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGVKMSKSKGNTV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYADLNKD 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +          
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKI---------- 688

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
                   T  +  +    V VE    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 689 ------LNTLNNYNNLSESVKVEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|149192007|ref|ZP_01870235.1| leucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834143|gb|EDL51152.1| leucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 513

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 91/237 (38%), Gaps = 8/237 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V  G           PV+  E   +F +++ Y  +LL   
Sbjct: 151 KKTSSVNWCPNDLTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITEYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G  LK      +  +     PD    + YV I A 
Sbjct: 207 DNLEGWPEMVKTMQRNWIGRSEGVELKFEVQDHQDLEVYTTRPDTLMGVTYVGIAAG 263


>gi|312135070|ref|YP_004002408.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775121|gb|ADQ04608.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 817

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N +N +     L ISY  D  + T    ++   + ++ +    G  Y+
Sbjct: 90  KHGIHPSDWTWSNIQNMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    E    +++V  G          + V   + E +FFR++ Y ++LL   E
Sbjct: 150 KRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRDIE 205

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 206 KLDGWPEKVKIMQKNWIGRSEG 227



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 66/452 (14%), Positives = 150/452 (33%), Gaps = 43/452 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + +   + +     +  ++     E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLPIKVVIKGEGVDIENLQSAYEDEGVLINSGIFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +   + K            A             Q Y     P+ + +E G        
Sbjct: 390 LKNTDAMKKITQYLEQKGVGRACVTYKLRDWLISRQRYWGAPIPIVYCDECGIVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y               E               R+T         D         
Sbjct: 450 LPVLLPYNVEFKPTGQSPLSYCEEFVNTTCPKCGRPAKRET---------DTMDTFICSS 500

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----LLSANLPL- 286
                Y          + S   +W P D ++ G +    H +Y   F         +P  
Sbjct: 501 WYYFRYTDPKNDQKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFE 560

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K + + G +L  G K+SKSLGN++ P ++IE+ G D  R F++      +D  +   
Sbjct: 561 EPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIIEKYGADTARLFILFAAPPERDLEWSDQ 620

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRE 403
           G++         G    ++R   + ++  + +        +E D+ +    +  ++++ E
Sbjct: 621 GVE---------GCFRFLNRLWRLYIELKNKLADDNLVGESELDDELRYRLNYTIKKVTE 671

Query: 404 NM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ +    + A++ ++ L++ +  Y   ++  +L K           + ++ +R L IL+
Sbjct: 672 DIGERFNFNTAISTIMELLNFLYEY---KESGKLNKD----------LIIDTLRNLLILI 718

Query: 463 QAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
             F P +A ++++++   +  E   +   D+ 
Sbjct: 719 YPFTPHIACELWEVMGFGEDIEEVSWPQYDEA 750


>gi|237730627|ref|ZP_04561108.1| leucyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906166|gb|EEH92084.1| leucyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 868

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 214 LDNLDHWPDTVKTMQRNWIGRSEG 237



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 102/310 (32%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 511 YTCPQYNEGMLDPEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 570

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 571 LLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAQDAEGHELVYTGMSKMSK 630

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 631 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 684

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A +E  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 685 VYEHTSKGDVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 742

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P +   +++ L      +
Sbjct: 743 ----------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHVCFTMWEALKGEGDID 791

Query: 483 NRCFQSLDQR 492
           N  +   D+ 
Sbjct: 792 NAPWPMADEA 801


>gi|118497462|ref|YP_898512.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536154|ref|ZP_03079161.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|166231608|sp|A0Q693|SYL_FRATN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118423368|gb|ABK89758.1| leucyl-tRNA synthetase [Francisella novicida U112]
 gi|194372631|gb|EDX27342.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 813

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +   ++           GL        T  + IK  +    +     D L  
Sbjct: 206 SKLDGWPEAVKTMQINWIGKSKGL--------TVKFKIKDSNQEIEVFTTRPDTLMG 254



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 76/483 (15%), Positives = 147/483 (30%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N +  +  
Sbjct: 310 HPISAETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYNIPLKQVIESNDKKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVTLTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN +
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNTV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I+  G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDRYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKD 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +++ ++ Y + 
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNL 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
            +                 V VE    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 699 SE----------------SVKVEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|283784421|ref|YP_003364286.1| leucyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947875|emb|CBG87436.1| leucyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 102/311 (32%), Gaps = 75/311 (24%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          AK    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDAKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPKEAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP E++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQEMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTSRGDVAPLNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAIVRMLNPFTPHICF 770

Query: 472 KIFDILFVADE 482
            ++  L    +
Sbjct: 771 TLWQSLKGEGD 781


>gi|194434450|ref|ZP_03066711.1| leucyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417301|gb|EDX33409.1| leucyl-tRNA synthetase [Shigella dysenteriae 1012]
          Length = 891

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 110/334 (32%), Gaps = 78/334 (23%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHA 272
           GI    +       ++++   Y   T          ++    + P D+++ G +    H 
Sbjct: 511 GIPALRETD-TFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHL 569

Query: 273 IYWPAFLL---------------------------------SANLPLPKKVFSHGFILHK 299
           +Y+  F                                   +        V +      K
Sbjct: 570 LYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGKNGERNWVSPVDAIVERDEK 629

Query: 300 GE------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           G                   K+SKS  N IDP  ++E  G D +R F++          +
Sbjct: 630 GRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEW 689

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G++       AN     V + V       D       A TE  +++     + + ++
Sbjct: 690 QESGVEG------ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKV 743

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +++  +   + A+A ++ L++++     A+ P     T+ ++   ++    E +  +  
Sbjct: 744 TDDIGRRQTFNTAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVR 790

Query: 461 LLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
           +L  F P +   ++  L      +N  +   D++
Sbjct: 791 MLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK 824


>gi|152969245|ref|YP_001334354.1| leucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166231616|sp|A6T6A3|SYL_KLEP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150954094|gb|ABR76124.1| leucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 100/322 (31%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       +       A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTTKGEVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P  + 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHASF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 771 TLWRELNGEGDIDNAPWPVADE 792


>gi|328676960|gb|AEB27830.1| Leucyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 813

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +   ++           GL        T  + IK  +    +     D L  
Sbjct: 206 SKLDGWPEAVKTMQINWIGKSKGL--------TVKFKIKDSNQEIEVFTTRPDTLMG 254



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 75/483 (15%), Positives = 144/483 (29%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISGETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYDIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNKGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVTLTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKD 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +          
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKI---------- 688

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
                   T  +  +    V +E    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 689 ------LNTLNNYNNLSESVKIEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|306836711|ref|ZP_07469674.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567389|gb|EFM42991.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 1091

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 77/465 (16%), Positives = 138/465 (29%), Gaps = 48/465 (10%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +      D+   T  D  G       +  G+T +    +     R+              
Sbjct: 481 YAMGTRHDLDMPTVMDTTGHIAHTGTRFDGMTREEARVEIREALREQG------------ 528

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                     + +   +   G   +        L  + + +  +    A G         
Sbjct: 529 -------RIVKEIRPYVHSVGHSERSGEPIEPRLSLQWFVDVAQ-MAKASGDAVREGDTA 580

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +     E  +F             +      +PI    E  +      +D+       + 
Sbjct: 581 LHPQSLEPRYFEWVDDMHDWCISRQLWWGHRIPIWYGPERTNESGEVERDIVCVGPDEEP 640

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
                 DP  ++  W  +     +T G+ D       KF+P ++ V   DIL F      
Sbjct: 641 PAGYEQDPD-VLDTWFSSALWPFSTLGWPDKTP-DLEKFYPTNVLVTAYDILFFWVARMM 698

Query: 277 AFLLSAN----------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            F   A                 +P             +G K+SKSLGN IDP++ + + 
Sbjct: 699 MFGTFAGTKTPELLGKGTDGRPQIPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDY 758

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L R    G D     D      N   A  + N    +    L +  G+ P P
Sbjct: 759 GADALRFTLARGANPGVDLPLGSDAAAASRN--FATKLFN----ATKFALMNGAGVAPLP 812

Query: 381 G--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                +++D  IL     V  ++   + +    +A   +     +   D Y +  K    
Sbjct: 813 SRTELSDADRWILDRAEEVRTQVDAYLDDYQFAKANELLYHFTWDQLCDWYLEIAKTQIP 872

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +            V   VI  +  LL   +P +   ++  L   +
Sbjct: 873 RDGETVEGRNTQIVLGRVIDVVLRLLHPTMPYVTEVLWKALTGGE 917



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 228 SEAEGFSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYSTLWLPGADHAGIATQTK 287

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T          + F+D+                R + D +D + + F  T ++
Sbjct: 288 VEAKLKETEGKKRWDYEREEFIDKVWEWKEQYGGTIQNQMRAIGDSVDWTRERF--TLDE 345

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D G IY+      +S   E   +D EV  
Sbjct: 346 GLSRAVQTIFKNLYDAGMIYRANRLVNWSPVLETAVSDIEVVY 388


>gi|292487610|ref|YP_003530482.1| leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898849|ref|YP_003538218.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198697|emb|CBJ45806.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553029|emb|CBA20074.1| Leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 860

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWHRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDMTVLANEQVIDG----CCWRCDSKVERKEIPQWFVKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLESWPEQVKTMQRNWIGRSEG 229



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 80/195 (41%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +          A  +  +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLAFEHTEKGTVAALDVDALNDDQKALRRDLHKTISKVSDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF- 478
           L++++     A+ P   +++  DRA     +  E +  +  +L  F P ++  ++  L  
Sbjct: 732 LMNKL-----ARAP---QESGQDRA-----LMQEALLAVVRMLNPFTPHVSFVLWQALGG 778

Query: 479 -VADENRCFQSLDQR 492
               +N  +   D+ 
Sbjct: 779 MGDIDNAPWPQADEA 793


>gi|108563517|ref|YP_627833.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837290|gb|ABF85159.1| valyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 874

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 134/382 (35%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 332 KENALLEKIEEHAHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 390

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 391 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 448

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 449 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 508

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 509 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 568

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 569 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQESFKDKECLNEYQTPLGRYAKSRLNLV 625

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 626 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 675

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 676 KEALKLLHPFMPFISESLYHKL 697



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 37  IQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 96

Query: 60  ---------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 97  NVVEKQLLNQGIKKEDLGREEFIQKVWEWKEKSGGAILDQMKRLGVSAAFSRTRF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 155 KGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDG 188


>gi|332178820|gb|AEE14509.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 826

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K+YI     YP+   H+GH     I DV+AR++R+   +VL   G D  G     A
Sbjct: 29  KGNKKMYILEMFPYPSGNLHMGHVRNYTIGDVVARYYRMKSYNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N  N +   + L ISY  D  + T    ++   + L+ +   KG +
Sbjct: 89  AIKYGVHPYEWTIKNIENMKRQLNSLGISYDWDREVATCFPDYYKWNQWLFLQFYKKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +  + +    +++  +G          + V+  E E +FFR++ Y ++L   
Sbjct: 149 YKKKSKVNWCPQCKTVLANEQAEEG----RCWRCKSEVELKELEQWFFRITNYAEELSKD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            +    +   ++        +  G+ 
Sbjct: 205 LDILDGWPQKVKVMQRNWIGLSEGVM 230



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 37/279 (13%)

Query: 228 MYVWIDALTNY---LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----- 278
           M  ++D+   Y          +     KAKFW   D ++ G +    H +Y   F     
Sbjct: 499 MDTFVDSSWYYLRFCDPKNNDEPFSVEKAKFWMSVDQYIGGVEHAVLHLLYSRFFVKVLR 558

Query: 279 ---LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L+ + P    + + G +L  GEK+SKS GN++DP E+I   G D  R F++     
Sbjct: 559 DLGFLNIDEPF-SNLLTQGMVLKDGEKMSKSKGNIVDPEEIISTYGADTARLFILFAAPP 617

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +   G++          I  L + ++  I    +         TE + +I    +
Sbjct: 618 EKDLEWSDQGVEGAHR--FLARIWKLFNENLERIK---NVEASVEEDLTEDEVNIYKKLN 672

Query: 396 RVLQEIRENMQN-QLIHRALAQVISLVSEVDRYF--DAQKPWELKKTNPDRASTVLYVTV 452
           + L +   +++N    + ++A ++   +E       +  +P  +KK              
Sbjct: 673 KTLLKASNDIENKFHFNTSIAALMEFTNEFSYSLRNEKIRPKLIKK-------------- 718

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +     I+L  F P ++ +I+  +   D   CFQ+  +
Sbjct: 719 -IFETFTIILSVFAPHISEEIWSRMGHTD-LVCFQNWPE 755


>gi|312127683|ref|YP_003992557.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777702|gb|ADQ07188.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 817

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y+
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLMELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    E    +++V  G          + V   + E +FFR++ Y ++LL   E
Sbjct: 150 KRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRDIE 205

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 206 KLDGWPEKVKIMQKNWIGRSEG 227



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 66/452 (14%), Positives = 152/452 (33%), Gaps = 43/452 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + +   + +     +  ++F    E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLPIKVVIKGEGVDIENFQNAYEDEGVLINSGIFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +   + K            A             Q Y     P+ + +E G        
Sbjct: 390 LKNTEAMKKITQYLEQKGVGRACVTYKLRDWLISRQRYWGAPIPIVYCDECGVVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y               E           ++ +        K   D         
Sbjct: 450 LPVLLPYNVEFKPTGQSPLSYCEEF---------VNTTCPKCGKPAKRETDTMDTFICSS 500

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----LLSANLPL- 286
                Y          + S   +W P D ++ G +    H +Y   F         +P  
Sbjct: 501 WYYFRYTDPKNDQKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFE 560

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   
Sbjct: 561 EPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQ 620

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRE 403
           G++         G    ++R   + ++  + +        +E D+ +    +  ++++ E
Sbjct: 621 GVE---------GCFRFLNRLWRLYIELKNKLADDNLIGESELDDELRYRLNYTIKKVTE 671

Query: 404 NM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ +    + A++ ++ L++ +  Y   ++  +L K           + ++ +R L IL+
Sbjct: 672 DIGERFNFNTAISTIMELLNFLYEY---KENGKLNKD----------LIIDTLRNLLILI 718

Query: 463 QAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
             F P +A ++++I+   +  E   +   D+ 
Sbjct: 719 YPFTPHIACELWEIMGFGEDIEEVSWPQYDEA 750


>gi|300934274|ref|ZP_07149530.1| valyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 943

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/406 (18%), Positives = 123/406 (30%), Gaps = 73/406 (17%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D +        +    H  ++      ++ ++            S    I P  +     
Sbjct: 360 DRKFPYVHSVGHSERSHEAIEPRLSLQWWVKVDELAKMAGDAVRSGDTVIHPKSQEPRWF 419

Query: 198 SFVKSGLKDLSLSRKTFDWG--IKIPDDPQY----------------------IMYVWID 233
            +V   + D  +SR+   WG  I I   P                        ++  W  
Sbjct: 420 DWVDD-MHDWCISRQ-LWWGHRIPIWYGPDGEIVCCGPDDEPPTGEGWKQDEDVLDTWFS 477

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN---------- 283
           +     +T G+ D       KF+P  + V G DIL F       F   A+          
Sbjct: 478 SALWPFSTMGWPDRTP-ELEKFYPTSVLVTGYDILFFWVARMMMFATFADSLENSVLSDT 536

Query: 284 ------------------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
                                   +P             KG K+SKSLGN IDP++ + +
Sbjct: 537 NGGEGHARRTDGATANTDRGNRPQIPFKDVFLHGLVRDEKGRKMSKSLGNGIDPMDWVRD 596

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+ L R    G D    +D  +   N   A  + N  ++   M       + P 
Sbjct: 597 YGADALRFTLARGANPGSDLPVGEDSAQSSRN--FATKLFN-ATKFALMNGAQVGDL-PA 652

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK----- 432
               T++D  IL    +V   + + +       A   +         D Y +  K     
Sbjct: 653 REELTDADRWILDRLEQVRALVDDALDRYEFSLANENLYKFAWGELCDWYLEIAKVQIPR 712

Query: 433 PWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            W+        R      V   V+  +  LL   +P +   ++  L
Sbjct: 713 DWDAASDEEVQRGVNTQLVLGRVLDTVLRLLHPAMPFVTETLWKSL 758



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D +AR  R+ G +VL+  G+D  G      
Sbjct: 56  SDKPPFSIVLPPPNVTGQLHMGHALDHTLMDAMARRKRMQGYEVLWLPGSDHAGIATQTK 115

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T          + F+++  +             R + D +D S + F  T + 
Sbjct: 116 VEAKLKETEGKDRFDYGREEFIERVWKWKHQYGDVITNQMRAVGDSVDWSRERF--TLDD 173

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 + ++K++ DKG IY+      +S   +   +D EV    D
Sbjct: 174 GLSRAVQTIFKELYDKGLIYRANRMVNWSPVLQTAISDIEVVYSDD 219


>gi|206577993|ref|YP_002239703.1| leucyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288936545|ref|YP_003440604.1| leucyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|238064869|sp|B5XZR2|SYL_KLEP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|206567051|gb|ACI08827.1| leucyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288891254|gb|ADC59572.1| leucyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 105/322 (32%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTTKGDVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P  + 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHASF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 771 TLWRELNGEGDIDNAPWPVADE 792


>gi|308183256|ref|YP_003927383.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065441|gb|ADO07333.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 872

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 134/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N  S  + +  + +          T       S  + V
Sbjct: 567 DIKLSTAHLEN--NKNFANKLFNAASY-LKLKQESFKDKERLNEYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKGKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|227327380|ref|ZP_03831404.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G     D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFDVADSAEKLTVYTTRPDTFMGVTYVAVAAG 264



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +            TE  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRQAFEHTEKGAVTALDIATLTEDQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   + ++ DRA     +T E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP---QDSDQDRA-----LTQETLLAVVRMLYPFTPHVCFTLWQALQG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDVDTAPW 787


>gi|331656669|ref|ZP_08357631.1| leucine--tRNA ligase [Escherichia coli TA206]
 gi|331054917|gb|EGI26926.1| leucine--tRNA ligase [Escherichia coli TA206]
          Length = 891

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 521 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 580

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 581 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 640

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 641 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 696

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 697 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 754

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 755 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 801

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 802 TLWQELKGEGDIDNAPWPVADEK 824


>gi|312171717|emb|CBX79975.1| Leucyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWHRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDMTVLANEQVIDG----CCWRCDSKVERKEIPQWFVKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLESWPEQVKTMQRNWIGRSEG 229



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 80/195 (41%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +          A  +  +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLAFEHTEKGTVAALDVDALNDDQKALRRDLHKTISKVSDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF- 478
           L++++     A+ P   +++  DRA     +  E +  +  +L  F P ++  ++  L  
Sbjct: 732 LMNKL-----ARAP---QESGQDRA-----LMQEALLAVVRMLNPFTPHVSFVLWQALGG 778

Query: 479 -VADENRCFQSLDQR 492
               +N  +   D+ 
Sbjct: 779 MGDIDNAPWPQADEA 793


>gi|227548727|ref|ZP_03978776.1| valyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079194|gb|EEI17157.1| valyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 901

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 125/383 (32%), Gaps = 58/383 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++            S    I P     +        + D ++SR+   W
Sbjct: 362 IEPRLSLQWFVKVDKLAAMAGEAVRSGDTVIHPES-MQKRYFDWVDNMHDWTISRQ-LWW 419

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +     +A 
Sbjct: 420 GHRIPIFYGPNDEVVCVGPDEEPPAGYTQDPDVLDTWFSSALWPFSTMGWPEKTPELEA- 478

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 479 FYPTSVLVTAYDILFFWVARMMMFGTFAATQTPELFPAGNNGRPQVPFTDLYLHGLVRDE 538

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           KG K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D      NA  A   
Sbjct: 539 KGRKMSKSLGNGIDPMDWVERFGADALRFALARGANPGVDLPIGED------NAQSARNF 592

Query: 359 GNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              +  +    L +   + P P     T++D  IL     V   +   + +    +A  +
Sbjct: 593 ATKLYNATKFALLNGAAVGPLPERAELTDADRWILDRAEEVRASVDAYLDDYQFAKANEE 652

Query: 417 VISLVSE--VDRYFDAQK---PWELK---KTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           +     +   D Y +  K   P E +   +    R  +   V   V+  +  LL   +P 
Sbjct: 653 LYHFAWDELCDWYLEIAKTQIPREEESASEQERARGRSTQIVLGRVVDVVLRLLHPTMPF 712

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +   ++  L    E+    S   
Sbjct: 713 VTEVLWTAL-TEQESLSVASWPT 734



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    +         Q H+GHA +  + D L R  R+ G +VL+  G D  G      
Sbjct: 39  SGKPAYSVVLPPPNVTGQLHMGHALDHTLMDALVRRKRMQGYEVLWLPGMDHAGIATQTK 98

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           FVD+                R + D +D S + F  T ++
Sbjct: 99  VEAKLKEEEGRDRYSLGRDEFVDRVWEWKENYGGAIASQMRAIGDSVDWSRERF--TLDE 156

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D G IY+      +S   E   +D EV  
Sbjct: 157 GLSRAVQTIFKQLFDAGLIYRDYRLVNWSPVLETAVSDIEVIY 199


>gi|85058781|ref|YP_454483.1| leucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738978|sp|Q2NUU7|SYL_SODGM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|84779301|dbj|BAE74078.1| leucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAV 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    ++   +L   YD    + T    ++   +  + ++ +KG +YK
Sbjct: 92  KNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREVTTCRPDYYRWEQWFFTRLYEKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +  +D+    +++V  G            V+  E   +F +++AY D+LL   +
Sbjct: 152 KTSAVNWCPQDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFVKITAYADQLLYDLD 207

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++           G
Sbjct: 208 KLESWPEQVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 80/198 (40%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP E++E+ G D +R F++          + + G++         G   
Sbjct: 618 SKMSKSKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GANR 668

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +  +             A  +  +++     + + ++ +++  +   + A+A 
Sbjct: 669 FLKRVWKLAYEHPQQGPVGALDIDALNDEQKALRREVHKTIAKVTDDIGRRQTFNTAIAA 728

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L++++     A+ P   ++T  DRA     +  E +  +  +L  F P     ++  
Sbjct: 729 IMELMNKL-----ARAP---QQTGQDRA-----LLQEALVAVVRMLYPFTPHACFTLWRA 775

Query: 477 LFVAD--ENRCFQSLDQR 492
           L      +N  +   D+ 
Sbjct: 776 LGGEGDIDNAPWPVADEA 793


>gi|330006003|ref|ZP_08305457.1| leucine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328536018|gb|EGF62427.1| leucine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       +       A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTTKGEVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P  + 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHASF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 771 TLWRELNGEGDIDNAPWPVADE 792


>gi|191173981|ref|ZP_03035499.1| leucyl-tRNA synthetase [Escherichia coli F11]
 gi|190905757|gb|EDV65378.1| leucyl-tRNA synthetase [Escherichia coli F11]
 gi|330910402|gb|EGH38912.1| leucyl-tRNA synthetase [Escherichia coli AA86]
          Length = 891

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 521 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 580

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 581 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 640

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 641 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 696

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 697 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 754

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 755 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 801

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 802 TLWQELKGEGDIDNAPWPVADEK 824


>gi|293408768|ref|ZP_06652607.1| leucyl-tRNA synthetase [Escherichia coli B354]
 gi|291471946|gb|EFF14429.1| leucyl-tRNA synthetase [Escherichia coli B354]
          Length = 891

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 111/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 521 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 580

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 581 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 640

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 641 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 696

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 697 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 754

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     +  DRA     +  E +  +  +L  F P +  
Sbjct: 755 TAIAAIMELMNKL-----AKAP---TDSEQDRA-----LMQEALLAVVRMLNPFTPHICF 801

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 802 TLWQELKGEGDIDNAPWPVADEK 824


>gi|293418753|ref|ZP_06661188.1| leucyl-tRNA synthetase [Escherichia coli B088]
 gi|291325281|gb|EFE64696.1| leucyl-tRNA synthetase [Escherichia coli B088]
          Length = 891

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 534 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 593

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 594 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 653

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 654 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 707

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 708 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 767

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 768 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 814

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 815 NAPWPVADEK 824


>gi|222055264|ref|YP_002537626.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782500|sp|B9M9F3|SYL_GEOSF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221564553|gb|ACM20525.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 824

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 95/243 (39%), Gaps = 7/243 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ + K Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     
Sbjct: 29  VEGKSKYYLLEMFPYPSGRIHMGHVRNYSIGDVIARFKRMKGFNVLHPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA         +  +N    R     +  SY  D  + T    ++   ++++ ++ +KG 
Sbjct: 89  AAIQHKSHPAKWTYENIDYMRGQLKKMGFSYDWDRELATCNVEYYKWEQLIFLQMLEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   S  +  R E    +++V  G+         + V+  E E + FR++ Y ++LL 
Sbjct: 149 AYKKKSSVNWCPRCETVLANEQVEDGS----CWRCDSLVEQKELEQWSFRITDYAEELLE 204

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
                P +   +           +G  ++  S +     IK+    Q  ++         
Sbjct: 205 DTYKLPGWPERVLTMQRNWIGRSTG-CEIDFSIEGRKDAIKVFTTRQDTLFGATFMSLAP 263

Query: 239 LTT 241
              
Sbjct: 264 EHP 266



 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 28/259 (10%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y          D  K ++W   D ++ G +    H +Y   F            N
Sbjct: 504 WYFLRYCCPDFACGPLDKGKTEYWMSVDQYIGGIEHAVMHLLYARFFTKVLRDLGYCDIN 563

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    + + G ++  G K+SKS GNV+DP  +IE+ G D  R F +      KD  +  
Sbjct: 564 EPFT-NLLTQGMVIKDGSKMSKSKGNVVDPNALIEKYGADTARLFSLFAAPPEKDLDWSD 622

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+         N +  LV   + +I            A T+  +++  +  + ++++ +
Sbjct: 623 QGVDGSYR--FLNRVWKLVYECLPLISA---TGPLDAAALTDEGKTLRRLVHKTIRKVSD 677

Query: 404 NMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +++     + A+A ++ +V+       A +P    K  P        V  E +  + +LL
Sbjct: 678 DIEDRFHFNTAIAAIMEMVNA----IQAFEP----KNQPRNV----PVLKEAVESVVLLL 725

Query: 463 QAFVPKLANKIFDILFVAD 481
             FVP  A ++++ L   D
Sbjct: 726 APFVPHFAEELWESLGHED 744


>gi|260596293|ref|YP_003208864.1| valyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215470|emb|CBA27584.1| Valyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 951

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGNVYVGRSEEEVRQENNLSADVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLDALLEKRTGNMMQPQLAEKIRKRTEKQFPEGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIEKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|302379745|ref|ZP_07268230.1| isoleucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312652|gb|EFK94648.1| isoleucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 1035

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 10/267 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +I    + ++ VW D+         +         K +PAD    G D     F+++   
Sbjct: 508 EIMTREKDVIDVWFDSGAMPFAQQHWPFEHTDDFDKVFPADFINEGIDQTRGWFYSLLAI 567

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + +++   P    + +   +   G+K+SKS GN IDPIE+ ++ G D +R++ +      
Sbjct: 568 STMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTIDPIELFDKYGADVVRFYSLYVSPPW 627

Query: 337 KDGFYDKDGLKKRVNADLA--NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               +D  GL++  +          N      +    D              D+ ILS  
Sbjct: 628 IPTKFDVSGLQEVESKFFRSFRNTYNFFQMYATTDETDPTEYFVEYKDRAVIDKWILSKF 687

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYV 450
           + + +   ENM      +   ++ + V     + Y   + ++ W+ +  +  +A  V   
Sbjct: 688 TNLQKFYFENMDKFEYTKVAREISNFVIEDLSNWYIRRNRRRFWKTEMDDDKKA--VYNT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           T E++  L  L+  F P +A +++  L
Sbjct: 746 TYEILVGLTKLIAPFTPFIAEEMYHDL 772



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  +          N +P I H     + D+  R+  + G  V    G D HG  +    
Sbjct: 38  EDNRYVFYDGPPTANGKPGIHHVISRTLKDMTCRYKTMQGYKVYKKAGWDTHGLPVEIEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHH 103
           +                       K  V      +++M+D    ++  DD   T +  + 
Sbjct: 98  EKKLGLHDKKEIENYGIEKFNEECKKSVFSYREKWQEMSDRMAYNVDMDDPYITLDNNYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   L  K+   G IY+G     Y  R        EV +G +
Sbjct: 158 ESVWALLDKMYKDGLIYEGAKILPYCPRCGTGLASHEVAQGYE 200


>gi|281600022|gb|ADA73006.1| Leucyl-tRNA synthetase [Shigella flexneri 2002017]
          Length = 891

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 534 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 593

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 594 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 653

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 654 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 707

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 708 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 767

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E ++ +  +L  F P +   ++  L      +
Sbjct: 768 -----AKAP-----TDGEQDRALMQ---EALQAVVRMLNPFTPHICFTLWQELKGEGDID 814

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 815 NAPWPVADEK 824


>gi|21244284|ref|NP_643866.1| valyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|81799335|sp|Q8PGQ7|SYV_XANAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21109932|gb|AAM38402.1| valyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 944

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/415 (17%), Positives = 138/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQIKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDDAGKCYVGHDEAEVRAKHGLGAEIALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 AQAMAERGFGRYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEDLVAKRTSGLMKPKDAPKIEKATRKEFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNSEGARFTGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +V  E   +  N         +         D + +  KP  L   +
Sbjct: 664 RTEAEKWILARLDKVTAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNHQD 722

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       QS  Q
Sbjct: 723 ADAAASTRHTLLFVLESLLRLLHPLTPFVTEELWQQVAPRLGITTATISLQSFPQ 777



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGQTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|323952780|gb|EGB48648.1| leucyl-tRNA synthetase [Escherichia coli H252]
 gi|323958401|gb|EGB54107.1| leucyl-tRNA synthetase [Escherichia coli H263]
          Length = 891

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 521 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 580

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 581 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 640

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 641 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 696

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 697 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 754

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 755 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 801

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 802 TLWQELKGEGDIDNAPWPVADEK 824


>gi|262041266|ref|ZP_06014477.1| leucine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041382|gb|EEW42442.1| leucine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       +       A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTTKGEVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P  + 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHASF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 771 TLWRELNGEGDIDNAPWPVADE 792


>gi|317046768|ref|YP_004114416.1| valyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948385|gb|ADU67860.1| valyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 951

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 140/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNHGNVYVGRTEEEVRQENNLAADVALRQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFMKDEDGKPQVPFKTVYITGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLADKIRKRTEKQFPDGILPSG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGQNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MKLSLADRWILTEFNSTVKAYREALDSYRFDIAANLLYDFTWNQFCDWYLELTKP-VMNN 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            +           V V+  L  L    +P +   I+  +     ++D+    Q   Q
Sbjct: 727 GSEAELRGTRNTLVTVLEALLRLAHPIIPFITETIWQRVKVLKNISDDTIMLQPFPQ 783



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ-----NAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +       G T + +  +                 SR  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRQDYGREAFIDKIWQWKAESGGNISRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRETKGSMWHIRYPL 204


>gi|109899865|ref|YP_663120.1| valyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109702146|gb|ABG42066.1| valyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 921

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 127/395 (32%), Gaps = 81/395 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  +       +   +S     +P         ++   ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVAVQELAKPAIDAVKSGEIKFVPENWDKTYYQWMN-NIQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +      T G+  
Sbjct: 406 GHRIPAWYDENGKIYVGRTEAEVREKNGLDASVTLRQDEDVLDTWFSSALWPFATMGWPK 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                     P+ + V G DI+ F    +       +  +P  +   +      +G+K+S
Sbjct: 466 KTPELDTFV-PSAVLVTGFDIIFFWVARMIMMTKKFTGQIPFKEIYITGLIRDEQGDKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNVIDPI++I+                                       G DALR+
Sbjct: 525 KSKGNVIDPIDLIDGISIDDLVAKRTSGMMQPKLAAKIEKNTRKSYPEGFAAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
                 +  +D  +D   ++     +  N + N  SR V M  +D D          + +
Sbjct: 585 TFAAMASTSRDISFDVKRVEG--YRNFCNKLWN-ASRFVMMNAEDQDTGANGGDMELSLA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP--WELKKTNPD 442
           D+ IL+   + L++  + +       A   V         D Y +  KP       T+  
Sbjct: 642 DKWILARFQQTLKDFEDALTGYRFDIAANLVYEFTWNQFCDWYLELSKPVLNSEVSTDAQ 701

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  T  +  V V+  +  L    +P +  +I+  L
Sbjct: 702 KRGT-RHTLVNVLESILRLAHPIMPFITEEIWQRL 735



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I           H+GH ++  I D L R+HR+ G + L+  GTD  G       
Sbjct: 29  EGQPYCILLPPPNVTGSLHMGHGFQQTIMDTLTRYHRMKGDNTLWQCGTDHAGIATQMVV 88

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        +  ++  N       L  S  +D  + T +    +
Sbjct: 89  ERQLNAQGKTRHDLGREAFVEKIWDWKKESGGNITQQMRRLGTSPDWDREVFTMDDDLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 149 AVNEVFVRLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEENGFMWHMRYPL 201


>gi|51246452|ref|YP_066336.1| leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|60390691|sp|Q6AJZ7|SYL_DESPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50877489|emb|CAG37329.1| probable leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 827

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 6/207 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 34  EDKEKYYLLEMFPYPSGRIHMGHVRNYTIGDVVARYKRMRGFNVLHPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           AQ       V+   N    R     L +SY  D  + T   +++   + L+ ++ +KG I
Sbjct: 94  AQKNNTHPSVWTYDNIDYMRQQLQQLGLSYDWDREMATCNPKYYRQEQQLFIEMLEKGLI 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +    +    +++V +GA           V   +  G+FF+++ Y ++LL+ 
Sbjct: 154 YEKVTTVNWCDTCQTVLANEQVIEGA----CWRCDQLVHPRKMNGWFFKITDYAEELLAD 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKD 206
            +    +   +           +GL  
Sbjct: 210 LDKLTGWPEKVRTMQRNWIGKSTGLSC 236



 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 36/268 (13%)

Query: 238 YLTTTGYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSANLPLPK 288
           Y +        D +KAK+W A D ++ G +    H +Y   F         L  + P  K
Sbjct: 513 YTSPRHTEAPLDKAKAKYWLAVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLEIDEPFIK 572

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + + G ++  G K+SKS GNV+DP ++I E G D  R F +      +D  +  +G++ 
Sbjct: 573 -LLTQGMVIKDGTKMSKSKGNVVDPHDLISEFGADTTRLFSLFAAPPERDLEWSSEGVEG 631

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENM 405
                        ++R    I  +++ +      P   +E D  +     + ++ + EN+
Sbjct: 632 S---------SRFLNRIYRFITANFEALTAGEAFPKKLSEEDRLLHRKNHQTIKRVTENI 682

Query: 406 Q-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           + N   + A++ V+ LV   ++ F   K         +++     V    +  + +LL  
Sbjct: 683 EHNFHFNTAISAVMELV---NQLFAQFK--------NEKSIAAPAVLRASVDSVLLLLSP 731

Query: 465 FVPKLANKIFDILFVAD--ENRCFQSLD 490
            VP   N+++ +L   +  EN+ +   D
Sbjct: 732 MVPHFCNEMWMVLGNTEPIENQAWPEFD 759


>gi|332094314|gb|EGI99365.1| leucyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 115/334 (34%), Gaps = 78/334 (23%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHA 272
           GI    +       ++++   Y   T          ++    + P D+++ G +    H 
Sbjct: 480 GIPALRETD-TFDTFMESSWYYARYTCPQYKEGILDSEAANYWLPVDIYIGGIEHAIMHL 538

Query: 273 IYWP--------AFLLSANLP-------------------------LPKKVFSHGFILHK 299
           +Y+         A +++++ P                             V +      K
Sbjct: 539 LYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEK 598

Query: 300 GE------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           G                   K+SKS  N IDP  ++E  G D +R F++          +
Sbjct: 599 GRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEW 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G++       AN     V + V       D       A TE  +++     + + ++
Sbjct: 659 QESGVEG------ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALSRDVHKTIAKV 712

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +++  +   + A+A ++ L++++     A+ P     T+ ++   ++    E +  +  
Sbjct: 713 TDDIGRRQTFNTAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVR 759

Query: 461 LLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
           +L  F P +   ++  L      +N  +   D++
Sbjct: 760 MLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK 793


>gi|227500646|ref|ZP_03930695.1| isoleucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217233|gb|EEI82577.1| isoleucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 1037

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/458 (14%), Positives = 150/458 (32%), Gaps = 31/458 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +      ++ F    D  G              +   D N + +R + +   +    F +
Sbjct: 332 YQIGRKYNLAFVQPVDLEGNFTET-----PWKGEFIFDTNEKIWRHLQEEGKV----FAK 382

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            T + ++  C      +          Y       D    N++EV             N 
Sbjct: 383 ETIEHNYPHCWRCHTPL--VYYAKPSWYIEMSKFSDAMVKNNNEVNWFPQTIGDKRFGNW 440

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +++              +   +          R       ++   +D+ L R   D 
Sbjct: 441 LENVKDWAISRSRYWGTPLNIWKCDDCGHTDTVASRAELKERAIEDISEDIELHRPYVDN 500

Query: 217 GIKIPDDPQYIMY-------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                D    +M+       VW D+         Y  +       ++PAD    G D   
Sbjct: 501 VSIKCDKCGGVMHRVPDVIDVWFDSGAMPFAQIHYPFDKSQKLDNYFPADFISEGIDQTR 560

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + +     P    + +   +   G+K+SKS GN +DP  + ++ G DA+R+
Sbjct: 561 GWFYSLMAISTITLGKAPYKNVLVNDLVVDKNGQKMSKSRGNTLDPFALFDKYGADAVRF 620

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD----YDGMIPTPGAF 383
           + +          +D+ GL +  N +      N+ +        D     +      G  
Sbjct: 621 YSLYVSPPWMQTKFDEKGLVEVKN-NFFRTFENVYNFFALYANTDKLSAEEIAKFEDGQL 679

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT 439
            + D+ + S  + +++   E M+    ++ +  +   V     + Y   + ++ W   K 
Sbjct: 680 EKIDKWLYSKLNSLIKNYTEAMEVFDYNKVVHMISDFVVEDLSNWYIRRNRKRFWS--KD 737

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  V   T + +  ++ L+    P +A +++  L
Sbjct: 738 LTASKKAVYKTTFDALLTISKLIAPVTPFIAEEVYRSL 775



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E+  I       N +P I H     + D+ +R+  + G  VL   G D HG  +   
Sbjct: 37  EDAEEYIIFDGPPTANGKPGIHHVIARTLKDMTSRYKNMKGYKVLKKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRH 102
            + +                     K  V + S  +R+M+D +   Y  D+   T +  +
Sbjct: 97  VEKSLGFHDKNDIETYGIEKFNKLCKESVWKYSDLWREMSDRMAYLYNMDEPYVTMDNNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +T   L  +   KG IY+G     Y  R        EV +G             +  + 
Sbjct: 157 IETEWYLLDQAFKKGYIYEGAKVMPYCPRCGTGLASHEVAQGYQMDKTITLTVKFKKKDT 216

Query: 163 EGYFF 167
           +  +F
Sbjct: 217 KNEYF 221


>gi|212224954|ref|YP_002308190.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009911|gb|ACJ17293.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 1065

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 95/469 (20%), Positives = 177/469 (37%), Gaps = 39/469 (8%)

Query: 28  MIIADVLARFH--RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD 85
               D   R+   R +G+ V       +   +I +  +  G   K    ++         
Sbjct: 355 YSPVDDQGRYVEGRWNGVYVK------DADPEIIEHLKEKGYLVKAGTIEHKYPHCWRCK 408

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
              I      R T++      ++  + I +  +             D    N  +     
Sbjct: 409 TPLI-----FRATDQWFLKVSKVKDQIIKENDEKVTWYPDWVKVRYDNGVMNSGDWVISR 463

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQD--KLLSYYESHPEFILPIERRNEVISFVKSG 203
              +         W  E+G  + + ++++  KL    E + E I   E  +E +  ++  
Sbjct: 464 QRYWGIPLP---IWQSEDGEIYVVGSFEELVKLSVAIEVNGERIDLPEDYSEKLRVIEEK 520

Query: 204 LKDLSLSRKTFDWGI-----KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           L    L R   D  I     K     + ++ VW D+      +  Y  N +  K   WPA
Sbjct: 521 LGPEDLHRPYVDAFIIKVNGKEMRRVKDVVDVWFDSGIASWASLDYPRNEELFKEL-WPA 579

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D  V G+D +   F++    + +    +P  K       +  KG+K+SKSLGN+I P EV
Sbjct: 580 DFIVEGEDQVTKWFYSQQAASVIAFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEEV 639

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++ G D  R++++      ++  +   GL   KR+   L N     V  +  M L ++D
Sbjct: 640 VQKEGRDPFRFYMLWATNPWENLKFSWKGLAQVKRMLNILWNVY---VLSATYMSLDNFD 696

Query: 375 GMIPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF-- 428
                P      E D  ILS  + ++ E+ E ++   + +A   + + V       Y   
Sbjct: 697 PTRVNPEELPFREEDRWILSRVNSLIGEVTEGIETFRLTKATRAIYNFVVEDLSRWYIRL 756

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++ W  +  +PD+ +   Y   +V   L  L+  F P +A +I+  L
Sbjct: 757 IRKRMWV-EGDDPDKLAA-YYTVWKVFNVLLRLMAPFTPYIAEEIYQNL 803



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 20/157 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I    + 
Sbjct: 40  PKYYFLDGPPYVSGAIHLGTAWNKIIKDMVIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQ 99

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           A                      K F   N +   +   +L I   +D+   T +  + +
Sbjct: 100 ALGLKTKKDIETEIGVDEFIRKCKEFALNNLKVMTEQFKMLGIWMDWDNPYMTIKNEYIE 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +     K+  +KG + K      +  R E    + EV
Sbjct: 160 SGWFTLKRAWEKGLLEKDKRVLHWCPRCETALAEHEV 196


>gi|302871944|ref|YP_003840580.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574803|gb|ADL42594.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 817

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I DV ARF RL G +VL   G D  G     AA 
Sbjct: 30  KPKYYVLEMFPYPSGKLHMGHVRNYSIGDVFARFMRLKGYNVLHPMGWDAFGLPAENAAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  N +     L ISY  D  + T    ++   + ++ +    G  Y+
Sbjct: 90  KHGIHPSDWTWSNIENMKRQLIELGISYDWDREVATCHPDYYKWTQWMFLQFYKAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    E    +++V  G          + V   + E +FFR++ Y ++LL   E
Sbjct: 150 KRSYVNWCPSCETVLANEQVVNG----RCERCKSLVGKKDLEQWFFRITNYAERLLRDIE 205

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 206 KLDGWPEKVKIMQKNWIGRSEG 227



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/452 (14%), Positives = 150/452 (33%), Gaps = 43/452 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           ++G                F  + +   + +     +  ++     E         ++  
Sbjct: 330 DYGTGAVMGVPAHDQRDFEFAKKYNLPIKVVIKGEGVDIENLQSAYEDEGVLINSGIFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +   + K            A             Q Y     P+ + +E G        
Sbjct: 390 LKNTDAMKKITQYLEQKGFGRACVTYKLRDWLISRQRYWGAPIPIVYCDECGIVPVPEED 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
              LL Y               E               R+T         D         
Sbjct: 450 LPVLLPYNVEFKPTGQSPLSYCEEFVNTTCPKCGRPAKRET---------DTMDTFICSS 500

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----LLSANLPL- 286
                Y          + S   +W P D ++ G +    H +Y   F         +P  
Sbjct: 501 WYYFRYTDPKNDQKPFEKSLVSYWLPVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFE 560

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K + + G +L  G K+SKSLGN++ P +++E+ G D  R F++      +D  +   
Sbjct: 561 EPFKNLLTQGMVLKDGAKMSKSLGNIVSPEDIVEKYGADTARLFILFAAPPERDLEWSDQ 620

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRE 403
           G++         G    ++R   + ++  + +        +E D+ +    +  ++++ E
Sbjct: 621 GVE---------GCFRFLNRLWRLYIELKNKLADDNLVGESELDDELRYRLNYTIKKVTE 671

Query: 404 NM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ +    + A++ ++ L++ +  Y   ++  +L K           + ++ +R L IL+
Sbjct: 672 DIGERFNFNTAISTIMELLNFLYEY---KESEKLNKD----------LIIDTLRNLLILI 718

Query: 463 QAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
             F P +A ++++I+   +  E   +   D+ 
Sbjct: 719 YPFTPHIACELWEIMGFGEDIEEVSWPQYDEA 750


>gi|261822387|ref|YP_003260493.1| leucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606400|gb|ACX88886.1| leucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G     D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFDVADSTEKLSVYTTRPDTFMGVTYVAVAAG 264



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +            TE  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRQAFEHTEKGAVTALDIATLTEDQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   ++++ DRA     +T E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP---QESDQDRA-----LTQETLLAVVRMLYPFTPHVCFTLWQALQG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDVDTAPW 787


>gi|254779703|ref|YP_003057809.1| valyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001615|emb|CAX29717.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Helicobacter
           pylori B38]
          Length = 874

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 132/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 332 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 390

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 391 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 448

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 449 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 508

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 509 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 568

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  +  
Sbjct: 569 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQEAFKDREHLDEYQTPLGRYAKSRLNSA 625

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 626 TKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 675

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 676 KEALKLLHPFMPFISESLYHKL 697



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+L R+ R+DG   L+  G D  G   
Sbjct: 37  IQEKNKRFCLMMPP-PNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAGIAT 95

Query: 59  AKAAQNAGVTT---------KVFVDQNS-----------RNFRDMADVLDISYDDFIRTT 98
               +   ++          + F+ +                + +      S   F  T 
Sbjct: 96  QNVVEKQLLSQGIKKEDLGREEFIKKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 154 DKGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDG 188


>gi|303234548|ref|ZP_07321185.1| isoleucine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494382|gb|EFL54151.1| isoleucine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 1035

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 10/267 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +I    + ++ VW D+         +         K +PAD    G D     F+++   
Sbjct: 508 EIMTREKDVIDVWFDSGAMPFAQQHWPFEHTDDFDKVFPADFINEGIDQTRGWFYSLLAI 567

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + +++   P    + +   +   G+K+SKS GN IDPIE+ ++ G D +R++ +      
Sbjct: 568 STMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTIDPIELFDKYGADVVRFYSLYVSPPW 627

Query: 337 KDGFYDKDGLKKRVNADLA--NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               +D  GL++  +          N      +    D              D+ ILS  
Sbjct: 628 IPTKFDVSGLQEVESKFFRSFRNTYNFFQMYATTDETDPTEYFVEYKDRAVIDKWILSKF 687

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYV 450
           + + +   ENM      +   ++ + V     + Y   + ++ W+ +  +  +A  V   
Sbjct: 688 TNLQKFYFENMDKFEYTKVAREISNFVIEDLSNWYIRRNRRRFWKTEMDDDKKA--VYNT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           T E++  L  L+  F P +A +++  L
Sbjct: 746 TYEILVGLTKLIAPFTPFIAEEMYHDL 772



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  +          N +P I H     + D+  R+  + G  V    G D HG  +    
Sbjct: 38  EDNRYVFYDGPPTANGKPGIHHVISRTLKDMTCRYKTMQGYKVYKKAGWDTHGLPVEIEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHH 103
           +                       K  V      +++M+D    ++  DD   T +  + 
Sbjct: 98  EKKLGLHDKKEIENYGIEKFNEECKKSVFSYREKWQEMSDRMAYNVDMDDPYITLDNNYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   L  K+   G IY+G     Y  R        EV +G +
Sbjct: 158 ESVWALLDKMYKDGLIYEGAKILPYCPRCGTGLASHEVAQGYE 200


>gi|269139983|ref|YP_003296684.1| leucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985644|gb|ACY85473.1| leucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559816|gb|ADM42480.1| Leucyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G          + V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDSKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DKLEDWPEQVKTMQRNWIGRSEG 229



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 112/322 (34%), Gaps = 39/322 (12%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +  Q            + LP+++    I      L       K     G
Sbjct: 493 FMESSWYYARYTCPQYDQGMLDPQAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMRDAG 552

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   D+P   +      L        Y    +G +    P D+ V   D          A
Sbjct: 553 LVDSDEPAKRLLCQGMVL----ADAFYYTGANGERNWVSPVDVIVERDD----KGRITKA 604

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                     + V++         K+SKS  N IDP  ++E  G D +R F++       
Sbjct: 605 TDRDGR----ELVYAGM------SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEM 654

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + + G++       AN     V +      +    +     A  +  +++     + 
Sbjct: 655 TLEWQESGVEG------ANRFLKRVWKLAFDHQQKGPTVALDLTALNDDQKALRRDLHKT 708

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A V+ L++++ R      P   +++  DRA     +  E + 
Sbjct: 709 IAKVSDDIGRRQTFNTAIAAVMELMNKLTR-----AP---QESEQDRA-----LMQEALL 755

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            +  +L  F P +   ++  L 
Sbjct: 756 AVVRMLYPFTPHVCFTLWSALG 777


>gi|260495228|ref|ZP_05815356.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197285|gb|EEW94804.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 859

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 67/417 (16%), Positives = 140/417 (33%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  ++ K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLNSKEALVKIAEYVEEKGYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGSGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNLNLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPLPK------------------KVFSHGFILHKG---------------EKISKSL 307
           S+N P  +                  K      ++ KG               EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVIKGDKAYSQSGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L+
Sbjct: 668 LVFENSEIVKKSNDKIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 728 NEVQTYVASSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|261402721|ref|YP_003246945.1| valyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369714|gb|ACX72463.1| valyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 878

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 140/392 (35%), Gaps = 15/392 (3%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +      K  I       W+    +      EV         + +   + W+++  + 
Sbjct: 335 QNVGVCWRCKTPIEIIVTEQWFVNVRKLIPKVREVADEIKWVPEHMKIRLLNWIKDMDWD 394

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +         + +    +    E    V         S      G K       
Sbjct: 395 WVISRQRIFATPIPVWYCKKCGNVVVAKEEDLPVDPT----KTSYVCDKCGSKDLIPETD 450

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+    +  T +LD+      K +P  L   G DI+R  A Y    +  L+   
Sbjct: 451 VLDTWMDSSITPMVITKWLDDDKF-FEKHYPVQLRPQGHDIIRTWAFYTIIKSVALTNKK 509

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +       G D  +   
Sbjct: 510 PWEEIVINGMVFGEDGHKMSKSRGNVVEPDEIISKYGADALRLW-ASNSVVGDDVQFLWK 568

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +             N    +   I  D  D +          D  ILS   R+++ + +
Sbjct: 569 EID--YAYRFLRKFWNACRFAKMHISDDIIDELKKPVEIKNPVDLWILSKLQRLIERVDK 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +++N   +  + ++   V     D Y +  K + L   + +      +    VI ++  L
Sbjct: 627 DLENYRFNT-IVEIYKFVWHEFCDNYIEMVK-YRLYGDDEEAKKEARWTLYYVIDKIVRL 684

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L  F P  ++ + DI  + + +  F  +D+R 
Sbjct: 685 LSPFAPHFSDYMADIYKIDNLHFSFPEVDERF 716



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  SNKPPYIIDTPPPYPTGRLHLGHALNWTYIDIIARYKRMKGFNVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                 +N    R     L IS  +D    T    +    
Sbjct: 91  VEEIHGITKSDVDRHKFRELCIELTKENIEKMRRQMKSLGISIDWDREYITMTPDYIKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++   G IY+G +   +  R +
Sbjct: 151 QTAFVRMYKDGLIYRGKFPVNWCPRCQ 177


>gi|227114423|ref|ZP_03828079.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G     D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFDVADSAEKLTVYTTRPDTFMGVTYVAVAAG 264



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +            TE  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRQAFEHTEKGAVTALDIATLTEDQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   + ++ DRA     +T E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP---QDSDQDRA-----LTQETMLAVVRMLYPFTPHVCFTLWQALQG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDVDTAPW 787


>gi|160892244|ref|ZP_02073247.1| hypothetical protein BACUNI_04708 [Bacteroides uniformis ATCC 8492]
 gi|317480716|ref|ZP_07939802.1| valyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156858722|gb|EDO52153.1| hypothetical protein BACUNI_04708 [Bacteroides uniformis ATCC 8492]
 gi|316903057|gb|EFV24925.1| valyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 877

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 125/366 (34%), Gaps = 58/366 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    +      P + +N         +KD  +SR+   
Sbjct: 351 PIEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWCISRQ-LW 408

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 409 WGHRIPAYFLPEGGYVVAATPEEALALAKEKTGNADLKLEDLRQDEDCLDTWFSSWLWPI 468

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    ++NP   +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 469 SLFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFQNVYFTGIVR 528

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D    ++  N     
Sbjct: 529 DKLGRKMSKSLGNSPDPLDLIEKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN----- 583

Query: 357 GIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
              N +  +  +I   +    +P P A   +     +  + V  E+ +      +  AL 
Sbjct: 584 -FNNKIWNAFRLIKGWEVSAEVPVPEASELAIRWFEAKQNEVAAEVADLFSKYRLSEALM 642

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P     +     E        L  LL  F+P +  
Sbjct: 643 AVYKL------FWDEFSSWYLEMIKPAYGQPINRKVYEATIGFFDNLLHLLHPFMPFITE 696

Query: 472 KIFDIL 477
           +++  L
Sbjct: 697 ELWQHL 702



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 63/209 (30%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLKYMVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNTW 240


>gi|331651654|ref|ZP_08352673.1| leucine--tRNA ligase [Escherichia coli M718]
 gi|331049932|gb|EGI21990.1| leucine--tRNA ligase [Escherichia coli M718]
          Length = 868

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 214 LDKLDHWPDTVKTMQRNWIGRSEG 237



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 511 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 570

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 571 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 630

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 631 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 684

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 685 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 744

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 745 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 791

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 792 NAPWPVADEK 801


>gi|291236811|ref|XP_002738331.1| PREDICTED: Methionyl-tRNA synthetase, mitochondrial-like
            [Saccoglossus kowalevskii]
          Length = 1208

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 21/229 (9%)

Query: 303  ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
            +SKS GN+++P+E +++   D LRYFL+RE     DG Y  D + + +NA+L + +GNL+
Sbjct: 978  MSKSKGNIVNPLEKVKDFTTDGLRYFLLREGVPHSDGDYYDDKVVECLNAELCDTLGNLL 1037

Query: 363  SRSVSMILKDYDGMIPTPGAF-----------TESDESILSVCSRVLQEIRENMQNQLIH 411
            SR  +  L       P                T  D +++   + + + + +   N  +H
Sbjct: 1038 SRCTAKSLNPKQIFPPLDANLFPPVMKSGIKATRDDYNLIMKFTNLPECVHQYYINFEVH 1097

Query: 412  RALAQVISLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKL 469
            +A+ +++S + E + +    +PW L+K   D+   +TVL++ +E +R   ILLQ   P L
Sbjct: 1098 KAIKEIMSCLRETNAFIQRHEPWNLRKNAADQTWLNTVLHIAMETLRISGILLQPVAPNL 1157

Query: 470  ANKIFDILFVADENRCFQSL--------DQRLKPGFMLHKTFDPIFPRF 510
            A+K+   L + + NR +  L        D  L  G  L      +F R 
Sbjct: 1158 ADKLLSRLGILNHNRTWSDLNCFSSLHADTCLNAGHSLGPDTGVLFTRI 1206



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 19/211 (9%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEEEGYFF 167
           +   G IY+G Y GWYS+ DEA+  D +V    D      +      N V+W EE+ Y F
Sbjct: 69  LVANGYIYEGKYCGWYSISDEAFITDKQVQDVTDKHGNVTKVSSETGNLVEWTEEKNYVF 128

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQ 225
           RLS +  ++  +   +P  I P +    +  ++  GL DLS+SR+     WGI + +D  
Sbjct: 129 RLSEFGPRIQRWLADNPNVIKPAKFTKVLHHWLNDGLPDLSVSRQRSRLKWGIPVANDNT 188

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP 285
             +YVW+DAL NYLT +GY       K+  WPA +H++GKDIL+       A     N+ 
Sbjct: 189 QTIYVWLDALVNYLTVSGYPH-----KSYRWPA-VHLVGKDILKGS----IASPEEGNVA 238

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            P++      +  KG  +S   G+   P E 
Sbjct: 239 SPEEGIV--ALPEKGSDVSPEEGSDASPEEA 267


>gi|332142600|ref|YP_004428338.1| valyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552622|gb|AEA99340.1| valyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 924

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 128/394 (32%), Gaps = 81/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  + +     +   ES     +P    N+        ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVAVESLAKPAIEAVESGEIRFVPENW-NKTYYQWMHNIQDWCISRQ-LWW 405

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 406 GHRIPAWYDENGKVFVGRTEEEVREKHGLGSEVTLSQDDDVLDTWFSSALWPFATMGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P+ + V G DI+ F    +       +  +P      +       G+K+S
Sbjct: 466 ETPDLETFV-PSSVLVTGFDIIFFWVARMIMMTKKFTGKIPFKDIYITGLIRDENGDKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGIDIESLVTKRTAGMMQPQLAEKIAKRTRKQFPDGIQAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES 386
                 +  +D  +D   ++     +  N I N  SR V M  +++D          + +
Sbjct: 585 TFAAMASTSRDINFDMARVEG--YRNFCNKIWN-ASRFVLMNTEEHDTGRDGGEMVLSMA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP--WELKKTNPD 442
           D  I +   + L E  + +++     A   V         D Y +  KP       T+ +
Sbjct: 642 DRWIWAKFQQTLVEFEKALEDYRFDIAAQTVYEFTWNQFCDWYLELTKPVLSNDASTDAE 701

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  T  +  + V+  L  LL   +P + + I+  
Sbjct: 702 KRGT-RHTLINVLESLLRLLHPLMPFITDTIWQR 734



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GH ++  I D L R+HR+ G + L+  GTD  G       + 
Sbjct: 31  DPYCILLPPPNVTGSLHMGHGFQQTIMDALTRYHRMKGDNTLWQVGTDHAGIATQMVVER 90

Query: 65  AGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                         + F+ +                R +    D S + F  T ++    
Sbjct: 91  QLNAEGKTRHDLGREDFIKKVWEWKEHSGGTITGQMRRLGTSPDWSREVF--TMDEDLSK 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ K+ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 149 AVTEVFVKLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLNEEEDGHMWHMRYPL 201


>gi|308184894|ref|YP_003929027.1| valyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060814|gb|ADO02710.1| valyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 872

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 136/386 (35%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E+   +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KESALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSETLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLNEYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKGKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  A---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTT 98
                     +  +   +  + FV +                + +      S   F  T 
Sbjct: 94  QNVVEKQLLNQGIKKEDLGREEFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDG 186


>gi|253687581|ref|YP_003016771.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511548|sp|C6DBW8|SYL_PECCP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251754159|gb|ACT12235.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G     D++ S +        PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFDVADSAEKLTVYTTRPDTFMGVTYVAVAAG 264



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVEKYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +            TE  +S+     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRQAFEHTEKGATTALDVATLTEDQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   + ++ DRA     +T E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP---QDSDQDRA-----LTQETLLAVVRMLYPFTPHVCFTLWQALQG 778

Query: 480 ADENRCFQS 488
             +      
Sbjct: 779 EGDIDTAPW 787


>gi|325498179|gb|EGC96038.1| leucyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 868

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 214 LDKLDHWPDTVKTMQRNWIGRSEG 237



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 511 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 570

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 571 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 630

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 631 SKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLKRVWKL 684

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 685 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 744

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 745 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 791

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 792 NAPWPVADEK 801


>gi|238920810|ref|YP_002934325.1| leucyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511543|sp|C5BGC7|SYL_EDWI9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238870379|gb|ACR70090.1| leucyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G          + V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDSKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   ++           G
Sbjct: 207 DRLEEWPEQVKTMQRNWIGRSEG 229



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 99/320 (30%), Gaps = 81/320 (25%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK---AKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T    +        A +W P D +V G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQFDQGMLDPQAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMR 549

Query: 280 -----------------------------LSANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V        KG          
Sbjct: 550 DAGLVDSDEPAKRLLCQGMVLADAFYYTGTNGERNWVSPVDVTVERDDKGRITQATDRDG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 RELVYAGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVE----- 664

Query: 353 DLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
               G    + R   +                A  +  +++     + + ++ +++  + 
Sbjct: 665 ----GANRFLKRVWKLAFDHQQKGLASALDLTALNDDQKALRRDLHKTIAKVSDDIGRRQ 720

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A V+ L++++ R      P   +++  DRA     +  E +  +  +L  F P 
Sbjct: 721 TFNTAIAAVMELMNKLTR-----AP---QESEQDRA-----LMQEALLAVVRMLYPFTPH 767

Query: 469 LANKIFDILFVADENRCFQS 488
           +   ++  L  A +      
Sbjct: 768 VCFTLWRALGGAGDIDTAPW 787


>gi|237743871|ref|ZP_04574352.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432902|gb|EEO43114.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 859

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 67/417 (16%), Positives = 140/417 (33%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  ++ K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLNSKEALVKIAEYVEEKGYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGSGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPLPK------------------KVFSHGFILHKG---------------EKISKSL 307
           S+N P  +                  K      ++ KG               EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVIKGDKAYSQSGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L+
Sbjct: 668 LVFENSEIVKKSNDKIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 728 NEVQTYVASSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|167760259|ref|ZP_02432386.1| hypothetical protein CLOSCI_02632 [Clostridium scindens ATCC 35704]
 gi|167662142|gb|EDS06272.1| hypothetical protein CLOSCI_02632 [Clostridium scindens ATCC 35704]
          Length = 1049

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/460 (14%), Positives = 139/460 (30%), Gaps = 16/460 (3%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    DE G+    A         VFV           D   + +D     
Sbjct: 340 KVGRKYDMPFVQLVDEKGRMTEDAPCAG-----VFVKDADPEILKDLDARGLLFDAPKFE 394

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               H   C       + +    K        + +    N      G        ++  V
Sbjct: 395 HSYPHCWRCDTPLLYYARESWFIKMTEVKDDLIANNNTINWIPESIGKKRFGDWLEN--V 452

Query: 158 QWMEEEGYFFRLSA---YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           Q        +  +    ++ +    +       L     N             +++ K  
Sbjct: 453 QDWGISRNRYWGTPLNIWECECGHQHSIGSIAELKEMSDNCPEDIELHRPYIDAVTIKCP 512

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G ++   P+ ++  W D+ +       Y         K +PAD      D     F++
Sbjct: 513 ICGKEMHRVPE-VIDCWFDSGSMPFAQHHYPFENKELFEKQFPADFISEAVDQTRGWFYS 571

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + L+    P    +         G+K+SKS GN +DP + +E+ G DA+R++    
Sbjct: 572 LLAISTLIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYVN 631

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESI 390
            A      +    + +     +           +   +  +D           +  D+ +
Sbjct: 632 SAPWLPNRFHGKAVTEGQRKFMGTLWNTYAFFVLYANIDGFDATKYSLDYDKLSVMDKWL 691

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS  + +++E+ +N+ N  I  A   +   V ++ + Y    +     K           
Sbjct: 692 LSKLNTLIKEVDDNLGNYRIPEAARALQDFVDDMSNWYVRRSRERFWAKGMEQDKINAYM 751

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                + ++       +P +   I+  L  + +    +S+
Sbjct: 752 TLYTALVEVCKAAAPMIPFMTEDIYQNLVRSIDQSAPESI 791



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D++ R+  + G +V    G D HG  +    + A       
Sbjct: 47  PPTANGKPHIGHVLTRVIKDMIPRYRTMKGYEVPRKAGWDTHGLPVELEVEKALGLDGKD 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    + D +  +      ++   T      ++     K+I
Sbjct: 107 QIEEYGLEPFIDKCKESVWKYKGMWEDFSGTVGFWADMENPYVTYHNDFIESEWWALKQI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG +YKG     Y  R     +  EV +G  
Sbjct: 167 WDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 199


>gi|317012930|gb|ADU83538.1| valyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 872

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 134/382 (35%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDAPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQESFKDKERLNEYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNAGVTT---------KVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
              +   ++          + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLSQGIKKEDLGREEFIKKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDG 186


>gi|296103393|ref|YP_003613539.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057852|gb|ADF62590.1| leucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++           G
Sbjct: 206 LDTLDHWPDTVKTMQLNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 102/309 (33%), Gaps = 74/309 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPQYQEGMLDSDAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAKDAEGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++  
Sbjct: 677 VYEHTAQGDAPALNVAALTEDQQALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMN-- 734

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                     +L K  P        +  E +  +  +L  F P ++  ++  L      +
Sbjct: 735 ----------KLAKA-PQEGEQDRALMREALLAVVRMLNPFTPHVSFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQ 491
           N  +   D+
Sbjct: 784 NAPWPVADE 792


>gi|227542948|ref|ZP_03972997.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181170|gb|EEI62142.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 886

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 77/371 (20%), Positives = 131/371 (35%), Gaps = 52/371 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++                 I P         +V   + D ++SR+   
Sbjct: 371 PIEPRLSLQWFVKVEKLAKMAGDAIRDGKTTIHPAALEPRYFDWVD-NMHDWTISRQ-LW 428

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D+ D  K 
Sbjct: 429 WGHRIPIWYGPNDEVVCCGPDDTPPEGYTQDPDVLDTWFSSALFPFSTMGWPDSTDDLK- 487

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISK 305
           KF+P  + V   DIL F       F   A         +P             +G K+SK
Sbjct: 488 KFYPTSVLVTAYDILFFWVARMMMFGTYAGQMTEGLGEVPFTDLFLHGLVRDERGRKMSK 547

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN I+P++ +E+ G DALR+ L R    G D     D        +    + N    +
Sbjct: 548 SLGNGINPMDWVEDYGADALRFALARGANPGVDLPLGSDA--GSSARNFVTKLFNAARFA 605

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           +S   +  D     P   +++D  IL   + V +++ E + +    +A  ++   V +  
Sbjct: 606 LS---RGADASAELPAELSDADRWILDRLNEVTRDVNELLDDYQFAKANEEMFHFVWDEL 662

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +      L KTN         V   V+ Q+  LL   +P +   ++  L   +E 
Sbjct: 663 CDWYLE------LSKTNFQ-----PAVMGHVLDQVLRLLHPTMPFVTETLWTAL-TGEET 710

Query: 484 RCFQSLDQRLK 494
             F    +   
Sbjct: 711 ITFAEWPEAAP 721



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 23/161 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    +         Q H+GHA +  + D + R  R+ G +VL+  G D  G       +
Sbjct: 51  KPAFSVVLPPPNVTGQLHMGHALDHTLIDSIVRRKRMQGYEVLWLPGMDHAGIATQTKVE 110

Query: 64  NAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +           FVD+                R + D +D + + F  T ++  
Sbjct: 111 AKLQEEEGKRRWDYERDEFVDKVWEWKEEYGGRILSQMRAIGDSVDWTRERF--TMDEGL 168

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 169 SRAVQTIFKQMYDEGMIYRDYRLVNWSPVLETAVSDIEVVY 209


>gi|289668595|ref|ZP_06489670.1| valyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 944

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 137/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQIKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDDAGRCYVGHDEAEVRAKHGLAAQVALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 AQAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEALVAKRTNGLMQPRMAEKIEKATRKEFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +V  E   +  N         +         D + +  KP  L   +
Sbjct: 664 RTETEKWILARLDKVTAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNNQD 722

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       Q   Q
Sbjct: 723 ADAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPRLGITTATISLQRFPQ 777



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  ETYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGHTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|208435048|ref|YP_002266714.1| valyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432977|gb|ACI27848.1| valyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 872

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 133/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N VS  + +  + +          T       S  +  
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAVSY-LKLKQEAFKDREHLDEYQTPLGRYAKSRLNSA 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + DVLAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDVLARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  ---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREEFIKKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDG 186


>gi|169824801|ref|YP_001692412.1| isoleucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831606|dbj|BAG08522.1| isoleucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 1035

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 10/267 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +I    + ++ VW D+         +         K +PAD    G D     F+++   
Sbjct: 508 EIMTREKDVIDVWFDSGAMPFAQQHWPFEHTDDFDKVFPADFINEGIDQTRGWFYSLLAI 567

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + +++   P    + +   +   G+K+SKS GN IDPIE+ ++ G D +R++ +      
Sbjct: 568 STMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTIDPIELFDKYGADVVRFYSLYVSPPW 627

Query: 337 KDGFYDKDGLKKRVNADLA--NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               +D  GL++  +          N      +    D              D+ ILS  
Sbjct: 628 IPTKFDVSGLQEVESKFFRSFRNTYNFFQMYATTDETDPTEYFVEYKDRAVIDKWILSKF 687

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYV 450
           + + +   ENM      +   ++ + V     + Y   + ++ W+ +  +  +A  V   
Sbjct: 688 TNLQKFYFENMDKFEYTKVAREISNFVIEDLSNWYIRRNRRRFWKTEMDDDKKA--VYNT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           T E++  L  L+  F P +A +++  L
Sbjct: 746 TYEILVGLTKLIAPFTPFIAEEMYHDL 772



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  +          N +P I H     + D+  R+  + G  V    G D HG  +    
Sbjct: 38  EDNRYVFYDGPPTANGKPGIHHVISRTLKDMTCRYKTMQGYKVYKKAGWDTHGLPVEIEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHH 103
           +                       K  V      +++M+D    ++  DD   T +  + 
Sbjct: 98  EKKLGLHDKKEIENYGIEKFNEECKKSVFSYREKWQEMSDRMAYNVDMDDPYITLDNNYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   L  K+   G IY+G     Y  R        EV +G +
Sbjct: 158 ESVWALLDKMYKDGLIYEGAKILPYCPRCGTGLASHEVAQGYE 200


>gi|145296343|ref|YP_001139164.1| valyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140846263|dbj|BAF55262.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 903

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 118/361 (32%), Gaps = 47/361 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++                 I P         +V   + D ++SR+   W
Sbjct: 372 IEPRLSLQWFVKVEELAKMSGDAVREGDTTIHPKSLEPRYFDWVD-NMHDWTISRQ-LWW 429

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +       K
Sbjct: 430 GHRIPIWYGPNDEIICVGPDEQAPEGYVQDPDVLDTWFSSALWPFSTMGWPEKTP-ELEK 488

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 489 FYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGKDGRPQVPFTDLFLHGLVRDE 548

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N   A  +
Sbjct: 549 HGRKMSKSLGNGIDPMDWVENYGADALRFTLARGANPGVDLPVGEDSAQSSRN--FATKL 606

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N    ++  +       +P     T++D  I+    +V  ++   + N    +A  ++ 
Sbjct: 607 FNATKFAL--MNGAVSEGLPAREELTDADRWIVDRLEQVRLDVDAYLDNYQFAKANEELY 664

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    ++    +      V   V+  L  LL   +P +   ++  
Sbjct: 665 HFAWNEFCDWYLEIAKVQIPREGTSAQGENTQKVLGHVLDALLRLLHPAMPFVTEVLWQA 724

Query: 477 L 477
           L
Sbjct: 725 L 725



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 49  SDKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTK 108

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     + +  +     R + D +D S + F  T + 
Sbjct: 109 VEEMLKETEGKTRYDYDREEFIAKVWEWKQEYGGKIGEQMRAIGDSVDWSRERF--TLDD 166

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 167 GLSRAVQTIFKKLFDAGFIYQANRLVNWSPVLETAVSDIEVIY 209


>gi|157158979|ref|YP_001461810.1| leucyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980075|sp|A7ZJ31|SYL_ECO24 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157081009|gb|ABV20717.1| leucyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 115/334 (34%), Gaps = 78/334 (23%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHA 272
           GI    +       ++++   Y   T          +K    + P D+++ G +    H 
Sbjct: 480 GIPALRETD-TFDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHL 538

Query: 273 IYWP--------AFLLSANLP-------------------------LPKKVFSHGFILHK 299
           +Y+         A +++++ P                             V +      K
Sbjct: 539 LYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEK 598

Query: 300 GE------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           G                   K+SKS  N IDP  ++E  G D +R F++          +
Sbjct: 599 GRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEW 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G++       AN     V + V       D       A TE  +++     + + ++
Sbjct: 659 QESGVEG------ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKV 712

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +++  +   + A+A ++ L++++     A+ P     T+ ++   ++    E +  +  
Sbjct: 713 TDDIGRRQTFNTAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVR 759

Query: 461 LLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
           +L  F P +   ++  L      +N  +   D++
Sbjct: 760 MLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK 793


>gi|289663732|ref|ZP_06485313.1| valyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 944

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 137/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQIKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDDAGRCYVGHDEAEVRAKHGLAAQVALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 AQAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEALVAKRTNGLMQPRMAEKIEKATRKEFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +V  E   +  N         +         D + +  KP  L   +
Sbjct: 664 RTETEKWILARLDKVTAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNNQD 722

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       Q   Q
Sbjct: 723 ADAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPRLGITTATISLQRFPQ 777



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  ETYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGHTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|254374282|ref|ZP_04989764.1| leucyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572002|gb|EDN37656.1| leucyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 813

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     AA
Sbjct: 30  TKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N    R   D L  S+D    I T ++ ++   +  + ++  KG  Y
Sbjct: 90  IKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDEDYYKWEQWFFIQLYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 150 RKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKEIPQWFLKITDYADELLQDI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +   ++           GL        T  + IK  +    +     D L  
Sbjct: 206 SKLDGWPEAVKTMQINWIGKSKGL--------TVKFKIKDSEQEIEVFTTRPDTLMG 254



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 75/483 (15%), Positives = 144/483 (29%), Gaps = 62/483 (12%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           H       DV      L G           H Q+  + AQ   +  K  ++ N    +  
Sbjct: 310 HPISAETIDVWVANFVLMGYGSGAVMSVPAHDQRDWEFAQKYDIPLKQVIESNDNKLKID 369

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRIL--WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +            TEK               +    I K             +   D  
Sbjct: 370 LEKQAF--------TEKGILINSGEFDGLNFKNAYQAIKKYLTEQNRGYETTNFRIHD-- 419

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     P+   ++ G            L    +  E   P++   E I+   
Sbjct: 420 -WGISRQRYWGCPIPMIHCDDCGAVPEKEENLPVRLPTDVTLTEAGSPLKDIPEFINV-- 476

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PAD 259
                        + G     +       + ++   Y   T    N    +   +  P D
Sbjct: 477 ----------ACPECGKPAKRETD-TFDTFFESSWYYARYTCPTANQMLDQEANYWLPVD 525

Query: 260 LHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P  K + + G +L  G K+SKS GN++
Sbjct: 526 KYIGGIEHAIMHLLYARFFHKLMRDQGLVKSDEPF-KNLLTQGMVLKDGAKMSKSKGNIV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   + + G++       AN     V     +   
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSETGVEG------ANKFLRKVFNYAELNKD 638

Query: 372 DYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +   I       T+ D+         L++   +      +  ++  + +          
Sbjct: 639 IFAKNITLESQKLTKEDKKARFEIHSNLKQAIFDFDKSQFNTVVSACMKI---------- 688

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQS 488
                   T  +  +    V +E    L  +L  F P L + ++  L + ++  +  F +
Sbjct: 689 ------LNTLNNYNNLSESVKIEGFSILLRILAPFTPHLCHYLWQQLNLGEDILHTSFPT 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 VDN 745


>gi|292486862|ref|YP_003529732.1| valyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292900741|ref|YP_003540110.1| valyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200589|emb|CBJ47720.1| valyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291552279|emb|CBA19316.1| valyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 951

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 142/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAAGNVYVARSEEEARAENNLAADVVLTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N    +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTAALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D+D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDHDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            A + +D  IL+  +R ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 LALSLADRWILAEFNRTVKAYREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            +           V V+  L  L    +P +   I+  +     ++D+    Q + +
Sbjct: 727 GSEAHLRGTRNTLVNVLEALLRLAHPIIPFITETIWQRVKVLKNISDDTIMLQPMPE 783



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
              E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSEESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|284009232|emb|CBA76326.1| leucyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 871

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ Q H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 42  NKEKYYCLSMLPYPSGQLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 102 VKNNTAPAPWTYANIEYMKNQLKMLGFGYDWSREVTTCTPEYYRWEQWFFTKLYEKGLVY 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++AY ++LL+  
Sbjct: 162 KKTSAVNWCPNDLTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITAYAEELLNDL 217

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 218 DKLDGWPEQVKTMQRNWIGRSEG 240



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 78/197 (39%), Gaps = 22/197 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + +  ++       AN    
Sbjct: 629 SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFVR 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            + R+V    +          + T   +++     + + ++ +++ +    + A+A ++ 
Sbjct: 683 RLWRTVFEHTQKGQTAPLNSASLTPEQKNLRRELHKTIAKVTDDIGRRYAFNTAIAAIME 742

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++++ R            +  DRA     +  E +  +  +L   +P     ++  L  
Sbjct: 743 FMNKLTR--------ASHDSEQDRA-----LLQESLEAIVRMLSPIIPHACFIMWKALGH 789

Query: 480 AD--ENRCFQSLDQRLK 494
            +  +N  +   D++ K
Sbjct: 790 QEDIDNAPWPVADEQAK 806


>gi|332096809|gb|EGJ01799.1| leucyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 860

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 110/334 (32%), Gaps = 78/334 (23%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHA 272
           GI    +       ++++   Y   T          ++    + P D+++ G +    H 
Sbjct: 480 GIPALRETD-TFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHL 538

Query: 273 IYWPAFLL---------------------------------SANLPLPKKVFSHGFILHK 299
           +Y+  F                                   +        V +      K
Sbjct: 539 LYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGKNGERNWVSPVDAIVERDEK 598

Query: 300 GE------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           G                   K+SKS  N IDP  ++E  G D +R F++          +
Sbjct: 599 GRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEW 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G++       AN     V + V       D       A TE  +++     + + ++
Sbjct: 659 QESGVEG------ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKV 712

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +++  +   + A+A ++ L++++     A+ P     T+ ++   ++    E +  +  
Sbjct: 713 TDDIGRRQTFNTAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVR 759

Query: 461 LLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
           +L  F P +   ++  L      +N  +   D++
Sbjct: 760 MLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK 793


>gi|259418508|ref|ZP_05742426.1| valyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345903|gb|EEW57747.1| valyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 1047

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 23/300 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIY 274
           + +  DP  ++  W  +    + T G+ +  +   +K++P    V G+DIL F     + 
Sbjct: 597 VPMFRDPD-VLDTWFSSGLWPIGTLGWPEWTE-ETSKYFPTSTLVTGQDILFFWVARMMM 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +L+ NLP+ +++      LH      KG+K+SKS GNV+DP+E+IEE G DALR+ 
Sbjct: 655 MQLAVLNENLPVQERIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIEEYGADALRFT 714

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFT 384
                + G     D   +      +    + N V R   M     D +            
Sbjct: 715 NAAMASLGGVLKLDMQRIAG--YRNFGTKLWNAV-RFAEMNEVFADAVPQLTVDQLAPKA 771

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPD 442
             +  I+   +RV + + E M+    + A   +   V     D Y +  KP  L+  + +
Sbjct: 772 AVNAWIIGETARVREAVDEAMEGFRFNDAAQALYGFVWGKVCDWYVELSKP-LLQGDDTE 830

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
             +        V+ Q  ILL   +P +  +++         +     D        L K 
Sbjct: 831 AQAETRATMRWVMDQCMILLHPIMPFITEELWSA--TGTRAKMLVHADWPTYTAADLVKP 888



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 64/197 (32%), Gaps = 36/197 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G       +    
Sbjct: 59  CIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMVVERKLA 118

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLDISYDDFIRTT------------ 98
            T+                  + +Q+     +    L  S D + RT             
Sbjct: 119 ETQQPSRRELGREKFLEKVWEWKEQSGGTIINQLKRLGASCD-YGRTAFTMAGAAGDTRT 177

Query: 99  ----EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++ ++ +KG IY+G     +    E   +D EV       +     
Sbjct: 178 GHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFK 237

Query: 155 NPVQWMEEEGYFFRLSA 171
            P+   E   Y  +   
Sbjct: 238 YPLAGGETYTYVEKDED 254


>gi|14590232|ref|NP_142298.1| valyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|3256704|dbj|BAA29387.1| 896aa long hypothetical valyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 896

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y     +
Sbjct: 458 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTY 517

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 518 VLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTALA-PPGED 576

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D+ ILS   R++
Sbjct: 577 HPFKWETVD--YNYRFLQKVWN-IYRFAERHIKDFDYEKYRDVELEPLDKWILSRLHRII 633

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++I+ +     D Y +  K + L   + +          E++ 
Sbjct: 634 KFATEELERYRFNLITRELITFIWHEVADDYIEMIK-YRLYGEDEESKLKAKVALYELLY 692

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +I+  +F
Sbjct: 693 NVMLLLAPFVPHITEEIYHAIF 714



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 13/169 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 36  ENKPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELK 95

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +     TK            +  Q     R     +  S  +D    T +  +    + 
Sbjct: 96  VEKEFGITKDQPEEFLKKCVEWTWQAIEAMRKQFIRIGYSADWDLEYHTMDDWYKAAVQR 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +   KG IY+  +  ++  +        EV    +  Y      P+
Sbjct: 156 SLLEFYKKGLIYREEHPVYWCPKCRTSLAKAEVGYVEEEGYLYYIKLPL 204


>gi|260576328|ref|ZP_05844319.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021399|gb|EEW24704.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 998

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 13/263 (4%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           + +  DP  ++  W  +    + T G+ +       K++P  + V G+DIL F    +  
Sbjct: 561 VGLYRDPD-VLDTWFSSGLWPIGTLGWPEPTP-ELQKYFPTSVLVTGQDILFFWVARMMM 618

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   +P             KG+K+SKSLGNVIDP+E+I++ G DALR+      + 
Sbjct: 619 MQLAVVGQIPFHTVYLHGLVRDAKGKKMSKSLGNVIDPLEIIDDYGADALRFANAAMASL 678

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVC 394
           G     D   +      +    + N    + ++ + + +      P A    ++ I+   
Sbjct: 679 GGVLKLDTQRIAG--YRNFGTKLWNACRFAEMNGVWEGHQTRALPPQAKATVNQWIIGET 736

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           ++V  E+   + +    +A A + + V     D Y +  KP      + D+A+       
Sbjct: 737 AKVRAEVDAALADYRFDQAAAALYAFVWGKVCDWYVEFAKPLF----DGDQAAETRATMG 792

Query: 453 EVIRQLAILLQAFVPKLANKIFD 475
            V+ Q  ILL   +P +  +++ 
Sbjct: 793 WVLDQCMILLHPIMPFVTEELWQ 815



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 23/154 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA+   + D+L R+HR+ G D L+  G D  G       +    
Sbjct: 40  CIMIPPPNVTGSLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMVVERELA 99

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCR 107
                                + +Q+     +    L  S D + R   T      D   
Sbjct: 100 RSQQPSRREMGREAFLDKVWEWKEQSGDTIINQLKRLGASCD-WSRNAFTMSGNFPDAVI 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++  +  KG IY+G     +    E   +D EV
Sbjct: 159 KVFVDMYAKGLIYRGKRLVNWDPHFETAISDLEV 192


>gi|320178432|gb|EFW53400.1| Leucyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 860

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 110/334 (32%), Gaps = 78/334 (23%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHA 272
           GI    +       ++++   Y   T          ++    + P D+++ G +    H 
Sbjct: 480 GIPALRETD-TFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHL 538

Query: 273 IYWPAFLL---------------------------------SANLPLPKKVFSHGFILHK 299
           +Y+  F                                   +        V +      K
Sbjct: 539 LYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEK 598

Query: 300 GE------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           G                   K+SKS  N IDP  ++E  G D +R F++          +
Sbjct: 599 GRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEW 658

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G++       AN     V + V       D       A TE  +++     + + ++
Sbjct: 659 QESGVEG------ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKV 712

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +++  +   + A+A ++ L++++     A+ P     T+ ++   ++    E +  +  
Sbjct: 713 TDDIGRRQTFNTAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVR 759

Query: 461 LLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
           +L  F P +   ++  L      +N  +   D++
Sbjct: 760 MLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK 793


>gi|289193088|ref|YP_003459029.1| valyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939538|gb|ADC70293.1| valyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 883

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 139/392 (35%), Gaps = 15/392 (3%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +      K  I       W+    +      EV         + +   + W+E+  + 
Sbjct: 339 QNVGVCWRCKTPIEIIVTEQWFVNVRKLIPKIREVADEIKWVPEHMKIRLLNWIEDMDWD 398

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +         +      +    E        +     S      G         
Sbjct: 399 WVISRQRIFATPIPVWYCPKCGNVVVAKE----EDLPIDPTKTSYVCDKCGNTDLIPETD 454

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+    +  T +LD+ +    K +P  L   G DI+R  A Y    +  L+   
Sbjct: 455 VLDTWMDSSITPMVITKWLDDDEF-FEKHYPVQLRPQGHDIIRTWAFYTIVKSIALTGKK 513

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +       G D  +   
Sbjct: 514 PWNEIVINGMVFGEDGHKMSKSRGNVVEPDEIITKYGADALRLW-ASNSVVGDDVQFLWK 572

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRE 403
            +             N    +   I  D    +  P   +   D  ILS   ++++ +  
Sbjct: 573 EVD--YGYRFLRKFWNACRFAKMHISDDIIDELKKPMEISNPIDLWILSKLQKLIERVDR 630

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +++N   +  + ++   V     D Y +  K + L   + +      +    VI +L  L
Sbjct: 631 DLENYRFNT-IVEIYKFVWHEFCDNYIEMVK-YRLYGDDEEAKKEARWTLYYVIDKLVRL 688

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L  F P  ++ + +I  + + +  F  +D+R 
Sbjct: 689 LCPFAPHFSDYMAEIYKIDNLHFSFPEIDERF 720



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG      
Sbjct: 35  SNKPPYIIDTPPPYPTGRLHLGHALNWTYMDIIARYKRMKGFNVLFPQGWDCHGLPTEVK 94

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                 +N    R     L IS  +D    T    +    
Sbjct: 95  VEEIHGITKSDIDRHKFRELCIELTKENIEKMRRQIKSLGISIDWDREYITMTPEYIKKS 154

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++   G IY+G +   +  R +
Sbjct: 155 QTAFVRMYKDGLIYRGKFPVNWCPRCQ 181


>gi|146313284|ref|YP_001178358.1| valyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145320160|gb|ABP62307.1| valyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 951

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 133/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVFVGRTEEEVRQENNLSADVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLQDLLEKRTGNMMQPQLAEKIAKRTEKQFPDGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDTYRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            N           + V+  L  L    +P +   I+  + V
Sbjct: 727 GNEAELRGTRNTLITVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|192359451|ref|YP_001980977.1| leucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692445|sp|B3PIB4|SYL_CELJU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190685616|gb|ACE83294.1| leucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 864

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKFYCLAMFPYPSGKLHMGHVRNYTITDVIARYQRMQGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N+ + R+    L   +D    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  LKHNTAPAKWTYSNTDHMRNQLKQLGFGFDWSRELTTCKPEYYQWEQWFFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKMSTVNWDPIDQTVLANEQVIDG----RGWRSGALVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           GL
Sbjct: 207 DKLPNWPEQVKTMQRNWIGKSRGL 230



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 73/196 (37%), Gaps = 27/196 (13%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N +DP  VI + G D +R F +      +   +   G++         G    
Sbjct: 622 KMSKSKANGVDPESVINQYGADTVRLFTMFAAPPEQSLEWSDSGVE---------GASRF 672

Query: 362 VSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           + R    +    +   P      +  +  + +       +Q++ ++   +   + A+A V
Sbjct: 673 LRRLWKAVEGHINAGTPGKLDAASLPQQQKDLRRKTHETIQKVSDDYGRRQTFNTAIAAV 732

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++E  +  D   P  L     +R +    + +             VP +   ++  L
Sbjct: 733 MELLNETSKLSDRANPQGLA---VEREALEAAILLLA---------PIVPHITQALWIEL 780

Query: 478 FVA--DENRCFQSLDQ 491
             +    N+ + +LD+
Sbjct: 781 GNSGIPLNQPWPTLDE 796


>gi|187732800|ref|YP_001879348.1| leucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|238691683|sp|B2TU77|SYL_SHIB3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187429792|gb|ACD09066.1| leucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 860

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKSMQRNWIGRSEG 229



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 102/310 (32%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D         TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDGLTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|271498965|ref|YP_003331990.1| valyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270342520|gb|ACZ75285.1| valyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 951

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAAVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDNGKVYVGRDEEEVRRENNLAADVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                KA   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPELKAFH-PSSVMVSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFHTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGD 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWILAEFNRTVKAYREALDSYRFDLAANVLYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSDAELRGTRHTLVTVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPL 204


>gi|253569874|ref|ZP_04847283.1| valyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251840255|gb|EES68337.1| valyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 879

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 127/364 (34%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAVTPEEALAKAKEKTGNAALTMDDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               +++P   + + ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINHPGNEEISYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             + +  +  +I     D  I  P A   +     S  + V  E+ +      +  AL  
Sbjct: 584 FCSKIWNAFRLIKGWTVDDNIQAPDAAKLAVHWFESKQNEVAAEVADLFSKYRLSEALMA 643

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  L  +     Y +  KP        DR  T    T+  +  L  LL  F+P +  +++
Sbjct: 644 VYKLFWDEFSSWYLEMIKP--AYGQGIDR--TTYSATLCFLDNLLHLLHPFMPFITEELW 699

Query: 475 DILF 478
             ++
Sbjct: 700 QQMY 703



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 62/209 (29%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLFYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNAW 240


>gi|160946485|ref|ZP_02093694.1| hypothetical protein PEPMIC_00449 [Parvimonas micra ATCC 33270]
 gi|158447601|gb|EDP24596.1| hypothetical protein PEPMIC_00449 [Parvimonas micra ATCC 33270]
          Length = 1035

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 140/393 (35%), Gaps = 66/393 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +    H P+ +  +  ++  ++ Y+DKL+    +      P     +        L
Sbjct: 386 HNYPHCWRCHTPLIYYSKPSWYIEVTKYKDKLIEN--AKAVNFYPDFVGEKRFGNWLENL 443

Query: 205 KDLSLSRKTFDWGIKIP---DDPQY----------------------------------- 226
            D ++SR    WG        D  +                                   
Sbjct: 444 NDWAISRSR-YWGTPFNVWKCDCGHCTSVGSRKELAERSIEEIDENIELHRPYVDNVHLK 502

Query: 227 -------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                        ++ VW D+ +       Y      +  + +PAD    G D     F+
Sbjct: 503 CEKCGGTMTREKDVIDVWFDSGSMPFAQHHYPFENKENFGELFPADFISEGIDQTRGWFY 562

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   + L++   P    + +   +   G+K+SKS GN IDPIE+ ++ G DA+R++ + 
Sbjct: 563 SLLAISTLITGKSPYKNVLVNDLILDKDGKKMSKSRGNTIDPIELFDKYGADAVRFYSLY 622

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDG--MIPTPGAFTESDE 388
                    +D +GL++ + +       N  +   +     D D            E D 
Sbjct: 623 VSPPWVPTRFDVEGLRE-IESKFFRSFKNTYNFFQLYSGTDDIDPREFFVEYNKRPEIDR 681

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRA 444
            ILS  + +L+   ENM    + + +  +   V     + Y   + ++ W  +  +  +A
Sbjct: 682 WILSRYNNLLKMYNENMDKFEVTKVVRAISDFVIEDLSNWYIRRNRRRFWNTEVDDDKKA 741

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V   T E++  ++ ++    P +A +++  L
Sbjct: 742 --VYNTTYEILLGISKIIAPITPFVAEEMYRNL 772



 Score = 50.5 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +           NA+P I H     + D+  R+  + G  V    G D HG  +   
Sbjct: 41  EGHDNYIFYDGPPTANAKPGIHHVISRTLKDMTCRYKTMKGFKVKRKAGWDTHGLPVEIE 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                       +  V      +R+M++ +    D  +   T +  +
Sbjct: 101 VEKKLGLTSKKDIENYGVEKFCKECRESVFFYESKWREMSERMAFLADMNNPYITLDNNY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   L  +I  KG +Y+G     Y  R        EV +G +       +   +  +E
Sbjct: 161 IESVWNLLDEIFKKGLMYEGAKILPYCPRCGTGLASHEVAQGYEMIKTTTVYVKFKKKDE 220

Query: 163 EGYFFRLS 170
           + YF   +
Sbjct: 221 DAYFIAWT 228


>gi|261343549|ref|ZP_05971194.1| leucine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568698|gb|EFB74233.1| leucine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 860

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +    +L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKGQLKMLGFGYDWNREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DKLEDWPEQVKTMQRNWIGRSEG 229



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 74/183 (40%), Gaps = 20/183 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + +  ++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFVR 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            V R V    +          A T   + +     + + ++ +++ +    + A+A ++ 
Sbjct: 672 RVWRLVHEHSQKGATQPLDISALTTEQKDLRRDLHKTIAKVTDDIGRRYAFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++++      + P   ++T  DRA     +  E +  +  +L   +P    +++  L  
Sbjct: 732 FMNKL-----VRAP---QETEQDRA-----LVQESLDAIVRMLSPIIPHACFEMWQALGH 778

Query: 480 ADE 482
            D+
Sbjct: 779 KDD 781


>gi|218779046|ref|YP_002430364.1| leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226695253|sp|B8F9F0|SYL_DESAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218760430|gb|ACL02896.1| Leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 863

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK ++     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYFLMEMFPYPSGKIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N          +  SY  D  I T +  ++   + L+ ++  KG +Y
Sbjct: 91  IKNNTHPAKWTYENIAAMGAQLKAMGFSYDWDREIATCKPDYYRWEQWLFVQMFKKGMVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   S  +    +    +++V +           + V+  + + +FFR++ Y D LL + 
Sbjct: 151 RKEASVNWCHTCQTVLANEQVEQNM----CWRCGDEVEQKKLKQWFFRITDYADDLLEHC 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   +    +       G
Sbjct: 207 DKLPGWPEKVVTMQKNWIGKSHG 229



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 72/185 (38%), Gaps = 27/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP E++ + G D +R F +      +D  + ++G++             
Sbjct: 617 EKMSKSKLNVVDPEELLAKYGADTIRLFCLFAAPPERDLDWSEEGVEGS---------YR 667

Query: 361 LVSRSVSMILKDYD---GMIPTPGAFTESD---ESILSVCSRVLQEIRENMQ-NQLIHRA 413
            + R   M     D      P  G+  + D   + +     + ++++ E++      + A
Sbjct: 668 FLQRVWRMFAAHMDEVKDAQPFEGSPDDLDGYLKDLYKKTHQTIKKVTEDIDGRFHFNTA 727

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ V+ LV+ V    D             RA     V    +  + +L+    P    ++
Sbjct: 728 ISAVMELVNMVYG-LDDN------LQGEKRAG----VLRAAVEAVILLISPMTPHFTEEL 776

Query: 474 FDILF 478
           + +  
Sbjct: 777 WSLFG 781


>gi|310766978|gb|ADP11928.1| leucyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 860

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  EGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T +  ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWNRELATCQPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDMTVLANEQVIDG----CCWRCDSKVERKEIPQWFIKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLESWPEQVKTMQRNWIGRSEG 229



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 81/195 (41%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R      +          A  +  +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLAFEHTEKGTATALDVDALNDDQKALRRYLHKTISKVSDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P   +++  DRA     +  E +  +  +L  F P ++  ++  L  
Sbjct: 732 LMNKL-----ARAP---QESTQDRA-----LMQEALLAVVRMLNPFTPHVSFVLWQALGG 778

Query: 480 ADE--NRCFQSLDQR 492
           A E  N  +   D+ 
Sbjct: 779 AGEIDNAPWPQADEA 793


>gi|215485682|ref|YP_002328113.1| leucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312965088|ref|ZP_07779325.1| leucyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|254782497|sp|B7UKT2|SYL_ECO27 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|215263754|emb|CAS08090.1| leucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312290179|gb|EFR18062.1| leucyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|323191281|gb|EFZ76545.1| leucyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 860

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPQYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|218699014|ref|YP_002406643.1| leucyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226695255|sp|B7NM01|SYL_ECO7I RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218369000|emb|CAR16754.1| leucyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 860

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNN 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 107/323 (33%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVIRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|260597067|ref|YP_003209638.1| leucyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216244|emb|CBA29157.1| Leucyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 896

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 66  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 125

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 126 AVKNNTAPAPWTYDNINYMKNQLKMLGFGYDWSRELATCTPEYYRWEQQFFTELYKKGLV 185

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 186 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 241

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +   ++   ++           G
Sbjct: 242 LDKLDQWPDTVKTMQRNWIGRSEG 265



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 105/322 (32%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T           K    + P D+++ G +    H +Y+  F     
Sbjct: 526 FDTFMESSWYYARYTCPQYKEGMLDEKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 585

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 586 DAGMVNSDEPAKQLLCQGMVLADAFYYVGQNGERNWVSPKDAIVERDEKGRIVKASDAAG 645

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP E++E  G D +R F++          + + G++     
Sbjct: 646 HELVYTGMSKMSKSKNNGIDPQEMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 701

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V R V       D       A  +  +++     + + ++ +++  +   +
Sbjct: 702 --ANRFLKRVWRLVYEHTALGDAPALNVDALNDDQKALRRDVHKTIAKVSDDIGRRQTFN 759

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P ++ 
Sbjct: 760 TAIAAIMELMN------------KLAKA-PQEGEQDRALMREALLAVVRMLNPFTPHVSF 806

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 807 TLWQELKGEGDIDNAPWPQADE 828


>gi|227488335|ref|ZP_03918651.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091697|gb|EEI27009.1| valyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 886

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 77/371 (20%), Positives = 131/371 (35%), Gaps = 52/371 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++                 I P         +V   + D ++SR+   
Sbjct: 371 PIEPRLSLQWFVKVDKLAKMAGDAIRDGKTTIHPAALEPRYFDWVD-NMHDWTISRQ-LW 428

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ D+ D  K 
Sbjct: 429 WGHRIPIWYGPNDEVVCCGPDDTPPEGYTQDPDVLDTWFSSALFPFSTMGWPDSTDDLK- 487

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISK 305
           KF+P  + V   DIL F       F   A         +P             +G K+SK
Sbjct: 488 KFYPTSVLVTAYDILFFWVARMMMFGTYAGQMTEGLGEVPFTDLFLHGLVRDERGRKMSK 547

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN I+P++ +E+ G DALR+ L R    G D     D        +    + N    +
Sbjct: 548 SLGNGINPMDWVEDYGADALRFALARGANPGVDLPLGSDA--GSSARNFVTKLFNAARFA 605

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           +S   +  D     P   +++D  IL   + V +++ E + +    +A  ++   V +  
Sbjct: 606 LS---RGADASAELPAELSDADRWILDRLNEVTRDVNELLDDYQFAKANEEMFHFVWDEL 662

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +      L KTN         V   V+ Q+  LL   +P +   ++  L   +E 
Sbjct: 663 CDWYLE------LSKTNFQ-----PAVMGHVLDQVLRLLHPTMPFVTETLWTAL-TGEET 710

Query: 484 RCFQSLDQRLK 494
             F    +   
Sbjct: 711 ITFAQWPEAAP 721



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 23/161 (14%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    +         Q H+GHA +  + D + R  R+ G +VL+  G D  G       +
Sbjct: 51  KPAFSVVLPPPNVTGQLHMGHALDHTLIDSIVRRKRMQGYEVLWLPGMDHAGIATQTKVE 110

Query: 64  NAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +           FVD+                R + D +D + + F  T ++  
Sbjct: 111 AKLQEEEGKRRWDYERDEFVDKVWEWKEEYGGRILSQMRAIGDSVDWTRERF--TMDEGL 168

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 169 SRAVQTIFKQMYDEGMIYRDYRLVNWSPVLETAVSDIEVVY 209


>gi|82543087|ref|YP_407034.1| leucyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123560325|sp|Q324Q2|SYL_SHIBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81244498|gb|ABB65206.1| leucine tRNA synthetase [Shigella boydii Sb227]
 gi|320185381|gb|EFW60151.1| Leucyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332097706|gb|EGJ02680.1| leucyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKSMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|16128625|ref|NP_415175.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89107511|ref|AP_001291.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170080221|ref|YP_001729541.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170080322|ref|YP_001729642.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238899919|ref|YP_002925715.1| leucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|256023746|ref|ZP_05437611.1| leucyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|307137259|ref|ZP_07496615.1| leucyl-tRNA synthetase [Escherichia coli H736]
 gi|2507435|sp|P07813|SYL_ECOLI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|259511542|sp|C4ZWC9|SYL_ECOBW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1651269|dbj|BAA35289.1| leucyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1786861|gb|AAC73743.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|169888056|gb|ACB01763.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|169888157|gb|ACB01864.1| leucyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238861643|gb|ACR63641.1| leucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450191|gb|ACX40613.1| leucyl-tRNA synthetase [Escherichia coli DH1]
 gi|309700880|emb|CBJ00177.1| leucyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|315135308|dbj|BAJ42467.1| leucyl-tRNA synthetase [Escherichia coli DH1]
 gi|315616439|gb|EFU97056.1| leucyl-tRNA synthetase [Escherichia coli 3431]
 gi|323943057|gb|EGB39216.1| leucyl-tRNA synthetase [Escherichia coli E482]
 gi|323972097|gb|EGB67311.1| leucyl-tRNA synthetase [Escherichia coli TA007]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE+ +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|15800356|ref|NP_286368.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829934|ref|NP_308707.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168758287|ref|ZP_02783294.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168764679|ref|ZP_02789686.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168767090|ref|ZP_02792097.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168777615|ref|ZP_02802622.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168779135|ref|ZP_02804142.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168786493|ref|ZP_02811500.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168802446|ref|ZP_02827453.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939382|ref|ZP_03084764.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208806935|ref|ZP_03249272.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208815085|ref|ZP_03256264.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822819|ref|ZP_03263137.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209396207|ref|YP_002269278.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217325755|ref|ZP_03441839.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791808|ref|YP_003076645.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261224109|ref|ZP_05938390.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257803|ref|ZP_05950336.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281593|ref|YP_003498411.1| Leucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|29336550|sp|Q8XBN8|SYL_ECO57 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238064866|sp|B5YQJ4|SYL_ECO5E RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12513546|gb|AAG54976.1|AE005243_5 leucine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360138|dbj|BAB34103.1| leucine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767190|gb|EDU31034.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|189002708|gb|EDU71694.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189354850|gb|EDU73269.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189363365|gb|EDU81784.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189365376|gb|EDU83792.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189373577|gb|EDU91993.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375579|gb|EDU93995.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208726736|gb|EDZ76337.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731733|gb|EDZ80421.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208737012|gb|EDZ84696.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209157607|gb|ACI35040.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209777048|gb|ACI86836.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777050|gb|ACI86837.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777052|gb|ACI86838.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777054|gb|ACI86839.1| leucine tRNA synthetase [Escherichia coli]
 gi|209777056|gb|ACI86840.1| leucine tRNA synthetase [Escherichia coli]
 gi|217321976|gb|EEC30400.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591208|gb|ACT70569.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761466|gb|ADD55427.1| Leucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320193049|gb|EFW67689.1| Leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638091|gb|EFX07855.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320643497|gb|EFX12667.1| leucyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320648832|gb|EFX17459.1| leucyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654418|gb|EFX22465.1| leucyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660099|gb|EFX27629.1| leucyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|326341393|gb|EGD65185.1| Leucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345827|gb|EGD69566.1| Leucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|303228946|ref|ZP_07315756.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516360|gb|EFL58292.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 822

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+   H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  ESKEKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKKMNGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKKQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G          NPV+  +   +F R++ Y D+LL  
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDG----LCWRCDNPVEKKDLSQWFLRITEYADRLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDGWPQRVKLMQKNWIGRSEG 229



 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 64/346 (18%), Positives = 119/346 (34%), Gaps = 44/346 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + +  G            L          +     +E     K      
Sbjct: 429 QRYWGVPIPVVYCDTCGEQLVPEDELPVRLPEDVKFESGAVSPLATSEAFMNAKCPKCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYTDALNDKAPFDSKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLGLIEANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMI 377
           + G D  R F++      +D  +   G++              + R   ++   D     
Sbjct: 599 KYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIVDAYDQAAKE 649

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              G  T+ + ++     RV++++ E++  N   + A++ ++ LV+ +            
Sbjct: 650 NHTGDLTKDEVALRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMY----------- 698

Query: 437 KKTNPDRASTVLYVTVEVI-RQLAILLQAFVPKLANKIFDILFVAD 481
              + D+A +V       +   L +LL  FVP +  +++  L   D
Sbjct: 699 --AHKDKAESVNADLANELTHNLVLLLAPFVPHITEELWHELGETD 742


>gi|224538678|ref|ZP_03679217.1| hypothetical protein BACCELL_03572 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519722|gb|EEF88827.1| hypothetical protein BACCELL_03572 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 876

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/392 (18%), Positives = 135/392 (34%), Gaps = 57/392 (14%)

Query: 139 DEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D+V    +   Y+ + N V +      +F ++  + D  L    +      P + +N   
Sbjct: 333 DKVEAYTNKVGYSERTNVVIEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-Y 391

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP------------------------------------ 221
            +    +KD  +SR+   WG +IP                                    
Sbjct: 392 RYWMENIKDWCISRQ-LWWGHRIPAYFLPEGGYVVAATEEEALKLAKEKTGNPALTMEDL 450

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAF 278
              +  +  W  +    ++    ++NP   +   ++P    V G DI+ F    +    +
Sbjct: 451 RQDEDCLDTWFSSWLWPISLFDGINNPGNEEIDYYYPTSDLVTGPDIIFFWVARMIMAGY 510

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                +P     F+       G K+SKSLGN  DP+E+IE+ G D +R  ++     G D
Sbjct: 511 EYEGKMPFKNVYFTGIVRDKLGRKMSKSLGNSPDPLELIEKFGADGVRMGMMLAAPAGND 570

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D    ++    +  N I N         +   D   P P A   +     S  + V 
Sbjct: 571 ILFDDALCEQ--GRNFCNKIWNAYRLVSGWTI---DDNQPIPEAAKLAISWFESKQNEVT 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEV 454
            E+ +      +  AL  V  L      ++D    W L+   P        TV    +  
Sbjct: 626 AEVADLFSKYRLSEALMAVYKL------FWDEFSSWFLEIIKPAYGQGIHSTVRNAAICY 679

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              L  LL  F+P +  +++  ++  +E    
Sbjct: 680 FDNLLRLLHPFMPFITEELWQQMYEREEGESI 711



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|110640871|ref|YP_668599.1| leucyl-tRNA synthetase [Escherichia coli 536]
 gi|123049389|sp|Q0TK31|SYL_ECOL5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110342463|gb|ABG68700.1| leucyl-tRNA synthetase [Escherichia coli 536]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|157160137|ref|YP_001457455.1| leucyl-tRNA synthetase [Escherichia coli HS]
 gi|312970723|ref|ZP_07784904.1| leucyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|166980076|sp|A7ZXR8|SYL_ECOHS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157065817|gb|ABV05072.1| leucyl-tRNA synthetase [Escherichia coli HS]
 gi|310337372|gb|EFQ02510.1| leucyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPQYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVATLNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|291279189|ref|YP_003496024.1| leucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753891|dbj|BAI80268.1| leucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 853

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y      YP+ + H+GH     I DV+AR+  +   +VL   G D  G     AA
Sbjct: 29  SKKKYYCLEMFPYPSGKIHMGHVRNYAIGDVIARYKLMQDYNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +    +L +SY  D  I T +  ++   + ++ ++ +KG  Y
Sbjct: 89  IKNKVHPAKWTYSNIEYMKKQLKMLGLSYDWDREIATCDPEYYKWEQKIFIEMFNKGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V  G          N V+  E EG+FF+++ Y ++LL Y 
Sbjct: 149 KKTSLVNWCPDCNTVLANEQVEDGK----CWRCSNEVEIKEIEGWFFKITDYAEELLEYT 204

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
                +   +            G
Sbjct: 205 YKLSGWPERVLTMQRNWIGKSVG 227



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 101/288 (35%), Gaps = 55/288 (19%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------------- 278
                Y +     +  D  + ++W P D ++ G +    H +Y   +             
Sbjct: 502 WYFLRYCSPHCDTNIFDKDETEYWMPVDQYIGGIEHAILHLLYSRFYTKVLRDLGYINFD 561

Query: 279 ------------------LLSANLPLPKKVFSHGF-------ILHKGEKISKSLGNVIDP 313
                                 N   P++V            I+ + EK+SKS  NV+DP
Sbjct: 562 EPFERLLTQGMVCKESYRCEEHNWLFPEEVIDGKCKHCGRDVIIGRIEKMSKSKKNVVDP 621

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +I++ G D  R F +      KD  + + G++        N +  LV   + +I + Y
Sbjct: 622 EALIDQYGADTARLFSLFAAPPEKDLEWSEQGVEGAFR--FINRVWRLVVNHIDLIKEYY 679

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                  G      + IL      ++++  +++   ++ A+A ++   +  + Y    K 
Sbjct: 680 GKSYNVDGKLE---KEILYHTHLTVKKVTNDIERFQLNTAVAAIMEFTN--NLYLIEPK- 733

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             L   +            + + +L  ++  F+P +A ++++      
Sbjct: 734 --LASESEKAL------FADALVKLIKIISPFIPHVAEELWNRCGFEG 773


>gi|191168680|ref|ZP_03030460.1| leucyl-tRNA synthetase [Escherichia coli B7A]
 gi|209917902|ref|YP_002291986.1| leucyl-tRNA synthetase [Escherichia coli SE11]
 gi|238064867|sp|B6I153|SYL_ECOSE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190901272|gb|EDV61041.1| leucyl-tRNA synthetase [Escherichia coli B7A]
 gi|209911161|dbj|BAG76235.1| leucyl-tRNA synthase [Escherichia coli SE11]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|323967589|gb|EGB63005.1| leucyl-tRNA synthetase [Escherichia coli M863]
 gi|327254326|gb|EGE65948.1| leucyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDSAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|320664896|gb|EFX32031.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|312144034|ref|YP_003995480.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904685|gb|ADQ15126.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 831

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 87/204 (42%), Gaps = 7/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-A 61
           ++E  Y+     YP+   H+GH     I DV+AR+ R++G +VL   G D  G      A
Sbjct: 31  DKENYYVLEMFPYPSGNLHMGHVRVYSIGDVVARYKRMEGYNVLHPMGWDAFGLPAENAA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
            ++  +  K +  QN  + ++    + +SY  D  + T  K ++   +  + K+ ++   
Sbjct: 91  IKHGNIHPKEWTWQNIAHMKEQMKAMGLSYDWDREVTTASKDYYKWTQWFFAKMFERDLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +    E    +++V      +        V+  E E +F +++ Y D+LL  
Sbjct: 151 YRKESTVNWCPSCETVLANEQVVN----EGCERCGTEVEPRELEQWFLKITDYADRLLDD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
           ++    +   ++   +       G
Sbjct: 207 FKELDNWPEKVKTMQKNWIGRSEG 230



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 104/277 (37%), Gaps = 33/277 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY--- 274
           K   D              Y            +KA  W P D ++ G +    H +Y   
Sbjct: 494 KRETDTMDTFVDSSWYFLRYTDANNEHKAFSKAKADKWFPVDQYIGGIEHAILHLLYSRF 553

Query: 275 WPAFLLSANL----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +   +    +           + G +L  G K+SKS GNV+DP +++EE G D  R F++
Sbjct: 554 FTKVVHDMGMAEAVEPFTNWLAQGMVLKDGAKMSKSKGNVVDPKDILEEYGADTARLFIL 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDE 388
                 KD  +   G++         G    ++R    I ++ + +    G     E D+
Sbjct: 614 FASPPEKDLEWSNKGVE---------GANRFLNRVWRYITENIEIIRSGEGEVIADELDK 664

Query: 389 S---ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
               +  +    ++++ E++ +    + A++ ++ L +EV  Y +          + D A
Sbjct: 665 EAKKLYRIMHSSIKKVSEDIGERLNFNTAISAIMELTNEVYSYLN----------DRDNA 714

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                +         +LL  F P L+ ++++ +   +
Sbjct: 715 EINSSLLRAAAENTLLLLAPFAPFLSEELWEKIGYEE 751


>gi|303231424|ref|ZP_07318155.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513861|gb|EFL55872.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 822

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y      YP+   H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  ESKEKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKKMNGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKKQQKALGLSYDWDREVATCKEDYYKWTQWFFEQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G          NPV+  +   +F R++ Y D+LL  
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDG----LCWRCDNPVEKKDLSQWFLRITEYADRLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDGWPQRVKLMQKNWIGRSEG 229



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 119/346 (34%), Gaps = 44/346 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + +  G            L          +     +E     K      
Sbjct: 429 QRYWGVPIPVVYCDTCGEQLVPEEELPVRLPEDVKFESGAVSPLATSEAFMNAKCPKCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A +W   D ++ G +
Sbjct: 489 PARRET---------DTMDTFIDSSWYFLRYTDALNDKAPFDSKIANYWMNVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F+        + AN P    + + G +L +G K+SKS GNV+ P E+I 
Sbjct: 540 HAILHLLYSRFFVKVIHDLGLIEANEPFRG-LLTQGMVLKEGSKMSKSKGNVVSPEEIIN 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMI 377
           + G D  R F++      +D  +   G++              + R   ++   D     
Sbjct: 599 KYGADTARLFILFAAPVDRDLDWSDQGVEGS---------YRFLGRVWRIVDAYDQAAKE 649

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              G  T+ + ++     RV++++ E++  N   + A++ ++ LV+ +            
Sbjct: 650 NHTGDLTKDEVALRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMY----------- 698

Query: 437 KKTNPDRASTVLYVTVEVI-RQLAILLQAFVPKLANKIFDILFVAD 481
              + D+A +V       +   L +LL  FVP +  +++  L   +
Sbjct: 699 --AHKDKAESVNADLANELTHNLVLLLAPFVPHITEELWHELGETE 742


>gi|302389340|ref|YP_003825161.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199968|gb|ADL07538.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 817

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 30  KKPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKRMKGYNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N  N R     L +SY  D  I T    ++   +  + K+ + G  Y
Sbjct: 90  IKHGVHPARWTWDNIANMRKQLKQLGLSYDWDREIATCHPGYYKWTQWFFLKLYEMGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G            V     E +FF+++ Y D+LL   
Sbjct: 150 RKKSFVNWCPSCATVLANEQVVDG----RCERCGAEVGKKNLEQWFFKITEYADQLLEDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++   E       G
Sbjct: 206 KKLPGWPEKVKVMQENWIGRSEG 228



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 105/265 (39%), Gaps = 33/265 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y          D  K ++W P D ++ G +    H +Y   F   
Sbjct: 494 DTMDTFMCSSWYYYRYTDPRNEEKPFDREKLEYWMPVDQYIGGVEHAILHLMYSRFFNKV 553

Query: 279 LLSANLPLPKKVFSH----GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +  A L    + F++    G +L  G K+SKS GN++ P E+IE+ G D  R F++    
Sbjct: 554 MRDAGLVYVDEPFANLLTQGMVLKDGAKMSKSKGNIVSPEEIIEKYGADTARLFILFASP 613

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +   G++         G    + R   ++ ++    +  P A    D  +  + 
Sbjct: 614 PEKDLEWSDQGVE---------GCHRFLQRVWRLV-EELGPRVKDPVADERLDREVRRLV 663

Query: 395 SRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++++ E+++     + A++ ++ +V+ ++              +    S    V  E
Sbjct: 664 HKTIKKVTEDIEERFNFNTAISAIMEMVNALN--------------SRKEESISGPVIKE 709

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
            +  L ++L  F P +  ++++ L 
Sbjct: 710 ALENLLVMLAPFAPHITEELWERLG 734


>gi|297171539|gb|ADI22537.1| valyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0500_09M11]
          Length = 643

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 131/394 (33%), Gaps = 82/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  + +     +   E+     +P    N   S+++  L+D  +SR+   W
Sbjct: 63  IEPYLTDQWFVAVESLAKPAIEAVENGDVQFVPKNYENMYFSWMRD-LQDWCISRQ-LWW 120

Query: 217 G--IKIPDDPQYIMYV---------------------------WIDALTNYLTTTGYLDN 247
           G  I    D    +YV                           W  +     +T G+ + 
Sbjct: 121 GHRIPAWYDEDGNVYVGRDEDEVRREHNLGDRPLSQDEDVLDTWFSSALWTFSTLGWPEQ 180

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +  K    P D+ V G DI+ F    +       +  +P  +          +G+K+SK
Sbjct: 181 TEELKTFH-PTDVLVTGFDIIFFWVARMIMMTLKFTGQVPFKQVYVHGLVRDAEGQKMSK 239

Query: 306 SLGNVIDPIEVIEE-------------------------------------VGVDALRYF 328
           S GNV+DP+++I+                                       G DALR+ 
Sbjct: 240 SKGNVLDPLDLIDGIDLDTLVDKRTRGLMQPQKEKQIGKRTRKEFPDGINAYGTDALRFT 299

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTE 385
            +   + G+D  +D   ++     +  N I N  +R V M  ++ D  +         + 
Sbjct: 300 FLSLASTGRDIKWDMGRIEG--YRNFCNKIWN-AARYVLMNTENQDCGLDADSGEVTLSL 356

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--P 441
           +D  I+S   R   E+ E +       A       +     D Y +  KP  L       
Sbjct: 357 ADRWIVSALQRAETEVTEALDQFRFDVASHAAYEFIWNEYCDWYLELSKP-VLYGDEYSE 415

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                     V V+  +  L   F+P +  +I+ 
Sbjct: 416 AEKRGTRRTLVRVLEAILRLAHPFMPFITEEIWQ 449


>gi|294676053|ref|YP_003576668.1| valyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474873|gb|ADE84261.1| valyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 1017

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 13/261 (4%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           + +  DP  ++  W  +    + T G+ +       K++P D+ V G DIL F    +  
Sbjct: 583 VDLARDPD-VLDTWFSSGLWPIGTLGWPEATP-EMRKYFPTDVLVTGFDILFFWVARMMM 640

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               ++  +P             KG+K+SK+ GNVIDP+E+I+E G DALR+      A 
Sbjct: 641 MQLAVTGEIPFHTVYLHQLVRDEKGKKMSKTAGNVIDPLEIIDEFGADALRFTNASMAAI 700

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G      KD +      +    + N  +R   M       +   P      +  I+   +
Sbjct: 701 GGVLKLSKDRIAG--YRNFGTKLWN-ATRFAEMNGVFEAEVAGIPQPSQTVNRWIIGETA 757

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +V  E+    ++   + A   +   V     D Y +  KP      + + A+        
Sbjct: 758 KVRAEVDAAFESYRFNDAANALYGFVWGKVCDWYVEFSKPLF----DGEHAAETRETMRW 813

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ Q  ILL   +P +  +++
Sbjct: 814 VLDQCYILLHPIMPFITEELW 834



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 29/182 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMIPPPNVTGALHVGHAFNNTVQDILIRWHRMRGFDTLWQPGQDHAGIATQLMVEK 95

Query: 65  AGVTTK-----------------VFVDQNSRNFRDMADVLDISYDD----FIRTTEK--- 100
               T+                  +  +      +    L  S D     F  +      
Sbjct: 96  ELAKTQQPSRAELGRDEFLKKVWEWKGKYGSTIINQLKRLGSSCDWDRNAFTMSGAPNAP 155

Query: 101 -----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  + +KG IY+G     +    E   +D EV       +      
Sbjct: 156 AGEEGNFHDAVIKVFVDLYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 215

Query: 156 PV 157
           P+
Sbjct: 216 PL 217


>gi|170683771|ref|YP_001742758.1| leucyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|226695260|sp|B1LL91|SYL_ECOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|170521489|gb|ACB19667.1| leucyl-tRNA synthetase [Escherichia coli SMS-3-5]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     +  DRA     +  E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP---TDSEQDRA-----LMQEALLAVIRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|218688465|ref|YP_002396677.1| leucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|306812926|ref|ZP_07447119.1| leucyl-tRNA synthetase [Escherichia coli NC101]
 gi|29336538|sp|Q8FJY9|SYL_ECOL6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782499|sp|B7MRS9|SYL_ECO81 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218426029|emb|CAR06846.1| leucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|281177792|dbj|BAI54122.1| leucyl-tRNA synthetase [Escherichia coli SE15]
 gi|305853689|gb|EFM54128.1| leucyl-tRNA synthetase [Escherichia coli NC101]
 gi|307552512|gb|ADN45287.1| leucyl-tRNA synthetase [Escherichia coli ABU 83972]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 107/323 (33%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|210135312|ref|YP_002301751.1| valyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133280|gb|ACJ08271.1| valyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 872

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 134/382 (35%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLVRFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQESFKDKERLNEYQTALGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKNKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNAGVTT---------KVFVDQNS-----------RNFRDMADVLDISYDDFIRTT 98
               +   ++          + F+ +                + +      S   F  T 
Sbjct: 94  QNVVEKQLLSQGIKKEDLGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEQGLIIQDNYMVNWCTKDG 186


>gi|168752659|ref|ZP_02777681.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188013578|gb|EDU51700.1| leucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVCMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|290476191|ref|YP_003469091.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175524|emb|CBJ82327.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  SNKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    +           +D  + T    ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYSNIEYMKAQLKTLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++AY ++LL+ 
Sbjct: 150 YKKTSAVNWCPHDLTVLANEQVIDG----CCWRCDSQVERKEIPQWFIKITAYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +   ++   ++           G
Sbjct: 206 LDKLEDWPEQVKTMQRNWIGRSEG 229



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 75/195 (38%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++++ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQIMVDKYGADTVRLFMMFAAPPELTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V               + T   + +     + L ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLVYEHSSKGTTQPLDIASLTTEQKDLRRDLHKTLAKVTDDIGRRQAFNTAVAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R          ++T  DRA     +  E +  +  +L    P     ++  L  
Sbjct: 732 LMNKLTR--------VPQETEQDRA-----LMQEALTAVVRMLSPITPHACFVMWKELGN 778

Query: 480 ADENRC--FQSLDQR 492
             +     +   D++
Sbjct: 779 ESDIDTAAWPQADEQ 793


>gi|291615302|ref|YP_003525459.1| leucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585414|gb|ADE13072.1| leucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 868

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 88/235 (37%), Gaps = 7/235 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+ + H+GH     I DVL R+H++ G  VL   G D  G     A
Sbjct: 30  SGKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLTRWHKMRGYSVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +       L I +   I T +  ++   + L+ ++ +KG  
Sbjct: 90  AIQNKVPPAKWTYDNIAYMKKQLQSLGLGIDWTREIATCQPDYYKWNQWLFLRMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V  G            V+  E  GY+F ++ Y ++LL+ 
Sbjct: 150 YKKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYFGITQYAEELLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            +  P +   ++           G    +        G+ I +   ++     D 
Sbjct: 206 LDKLPGWPERVKTMQANWIGKSHG-VRFAFPHDIRAQGVPINEGKLWVYTTRADT 259



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 111/400 (27%), Gaps = 87/400 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L       E  +P    N ++     
Sbjct: 430 WGVSRQRYWGCPIPIIHCDTCGSVPVPDDQLPVVLP------EDCVPDGSGNPLLKRADF 483

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
               L+ +        K   D              Y +        D    ++ P D ++
Sbjct: 484 ----LNCTCPKCGKPAKRETDTMDTFVDSSWYYARYASGFKKDAMVDSETNQWMPVDQYI 539

Query: 263 IGKDILRFHAIYWPAFLLSA--------NLPL---------------------------P 287
            G +    H +Y   +            + P                            P
Sbjct: 540 GGIEHAILHLLYSRFWSKVMRDLKLVNYDEPFANLLTQGMVLNHIYSRKTDKGGIRYFAP 599

Query: 288 KKV---------FSHGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +V          +    L  G          +SKS  N +DP  +IE+ G D  R F++
Sbjct: 600 DEVEPIKDETGHITGAKCLSDGGAVDYQGIGTMSKSKLNGVDPQALIEQYGADTARLFMM 659

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDE 388
                 +   +   G++         G    + R  +   +       +      +   +
Sbjct: 660 FAAPPEQTLEWADSGVE---------GAHRFLKRLWAFAAEFDGIGKQVGDLANLSNDAK 710

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           ++       L++   ++     +  ++  + +++             L+K+  +  +T  
Sbjct: 711 TLRREIHLALRQANYDLARFQFNTVVSAAMKMLNA------------LEKSGKE--ATNR 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            V  E +  L  LL    P +A+ ++  L   D+    Q 
Sbjct: 757 TVVGEALSILLRLLSPITPHIAHALWKDLDYGDDILTAQW 796


>gi|170021001|ref|YP_001725955.1| leucyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|189083000|sp|B1IYG6|SYL_ECOLC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169755929|gb|ACA78628.1| leucyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     + + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRIWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|82775910|ref|YP_402257.1| leucyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123563255|sp|Q32IT9|SYL_SHIDS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81240058|gb|ABB60768.1| leucine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|193063336|ref|ZP_03044426.1| leucyl-tRNA synthetase [Escherichia coli E22]
 gi|193069044|ref|ZP_03050002.1| leucyl-tRNA synthetase [Escherichia coli E110019]
 gi|194429744|ref|ZP_03062260.1| leucyl-tRNA synthetase [Escherichia coli B171]
 gi|218549783|ref|YP_002383574.1| leucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218553184|ref|YP_002386097.1| leucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218694082|ref|YP_002401749.1| leucyl-tRNA synthetase [Escherichia coli 55989]
 gi|256020594|ref|ZP_05434459.1| leucyl-tRNA synthetase [Shigella sp. D9]
 gi|260842868|ref|YP_003220646.1| leucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260853894|ref|YP_003227785.1| leucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260866790|ref|YP_003233192.1| leucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|307312642|ref|ZP_07592274.1| leucyl-tRNA synthetase [Escherichia coli W]
 gi|226695256|sp|B7M5G9|SYL_ECO8A RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695262|sp|B7LLH1|SYL_ESCF3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782498|sp|B7L9I6|SYL_ECO55 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|192930920|gb|EDV83524.1| leucyl-tRNA synthetase [Escherichia coli E22]
 gi|192957588|gb|EDV88033.1| leucyl-tRNA synthetase [Escherichia coli E110019]
 gi|194412225|gb|EDX28531.1| leucyl-tRNA synthetase [Escherichia coli B171]
 gi|218350814|emb|CAU96506.1| leucyl-tRNA synthetase [Escherichia coli 55989]
 gi|218357324|emb|CAQ89961.1| leucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218359952|emb|CAQ97496.1| leucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|257752543|dbj|BAI24045.1| leucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257758015|dbj|BAI29512.1| leucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257763146|dbj|BAI34641.1| leucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|284920442|emb|CBG33503.1| leucyl-tRNA synthetase [Escherichia coli 042]
 gi|306907344|gb|EFN37849.1| leucyl-tRNA synthetase [Escherichia coli W]
 gi|315059897|gb|ADT74224.1| leucyl-tRNA synthetase [Escherichia coli W]
 gi|323153635|gb|EFZ39883.1| leucyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323179881|gb|EFZ65438.1| leucyl-tRNA synthetase [Escherichia coli 1180]
 gi|323185003|gb|EFZ70370.1| leucyl-tRNA synthetase [Escherichia coli 1357]
 gi|323379539|gb|ADX51807.1| leucyl-tRNA synthetase [Escherichia coli KO11]
 gi|323945117|gb|EGB41179.1| leucyl-tRNA synthetase [Escherichia coli H120]
 gi|323976375|gb|EGB71465.1| leucyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324116716|gb|EGC10631.1| leucyl-tRNA synthetase [Escherichia coli E1167]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|323170770|gb|EFZ56420.1| leucyl-tRNA synthetase [Escherichia coli LT-68]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|298384033|ref|ZP_06993594.1| valine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298263637|gb|EFI06500.1| valine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 879

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 126/363 (34%), Gaps = 52/363 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAVTPEEALAKAKEKTGNAALAMDDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               +++P   + + ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINHPGNEEISYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++    +  + 
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQ--GRNFCSK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N         +   D  I  P A   +     S  + V  E+ +      +  AL  V
Sbjct: 588 IWNAFRLIKGWTI---DDNIQAPDAAKLAVHWFESKQNEVAAEVADLFSKYRLSEALMAV 644

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L  +     Y +  KP        DR  T    T+  +  L  LL  F+P +  +++ 
Sbjct: 645 YKLFWDEFSSWYLEMIKP--AYGQGIDR--TTYSATLCFLDNLLHLLHPFMPFITEELWQ 700

Query: 476 ILF 478
            ++
Sbjct: 701 QMY 703



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 62/209 (29%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLFYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNAW 240


>gi|296328927|ref|ZP_06871435.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153916|gb|EFG94726.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 859

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 68/418 (16%), Positives = 140/418 (33%), Gaps = 79/418 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     P  + E+ G     
Sbjct: 387 FNGLSSKDALVKIAEYVEEKGYGKRTYKYRLKDWGISRQRYWGTPIPALYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGNGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNLNLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFHKVLRDLGLL 556

Query: 281 SANLPLPKKVFSHGFIL----------------------------------HKGEKISKS 306
           S+N P  K++ + G +L                                   K EK+SKS
Sbjct: 557 SSNEPF-KRLLTQGMVLGPSYYSEKENKYLLQKDAIIKGEKAYSQSGEELQVKVEKMSKS 615

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
             N +DP E++++ G D  R F++      K+  ++++GL          G    ++R  
Sbjct: 616 KNNGVDPEEILDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVW 666

Query: 367 SMILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISL 420
            ++ ++ +              ++ D+++L   ++ ++++ + ++ N   + A+A  + L
Sbjct: 667 RLVFENSELVKNANDKIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAANMEL 726

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 727 INEVQTYVSSSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|19704849|ref|NP_602344.1| leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|32171570|sp|Q8RIQ3|SYL_FUSNN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19712730|gb|AAL93643.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 859

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 68/418 (16%), Positives = 141/418 (33%), Gaps = 79/418 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     P  + E+ G     
Sbjct: 387 FNGLSSKDALVKIAEYVEEKGYGKRTYKYRLKDWGISRQRYWGTPIPALYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGNGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNLNLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFHKVLRDLGLL 556

Query: 281 SANLPLPKKVFSHGFIL----------------------------------HKGEKISKS 306
           S+N P  K++ + G +L                                   K EK+SKS
Sbjct: 557 SSNEPF-KRLLTQGMVLGPSYYSEKENKYLLQKAAIIKGDKAYSQSGEELQVKVEKMSKS 615

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
             N +DP E++++ G D  R F++      K+  ++++GL          G    ++R  
Sbjct: 616 KNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVW 666

Query: 367 SMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISL 420
            ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L
Sbjct: 667 RLVFENSELVKNANDEIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAANMEL 726

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 727 INEVQTYVSSSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|120555655|ref|YP_960006.1| leucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120325504|gb|ABM19819.1| leucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 864

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 34  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++    L   YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 94  IANKSAPAKWTRSNIDYMKNQLKQLGFGYDWSRELATCDPEYYRWEQWFFARLYEKGLVY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  +   +F R++ Y ++LL+  
Sbjct: 154 KKMSTVNWDPVDQTVLANEQVVDG----RGWRSGALVEQKKIPQWFIRITDYAEELLNDL 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E    +   ++           G
Sbjct: 210 EDMEGWPEQVKTMQRNWIGKSVG 232



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 20/181 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I++ G D +R F++      +   +   G++       A+     
Sbjct: 623 KMSKSKNNGIDPQAIIDQHGADTVRLFMMFAAPPEQSLEWSDSGVEG------AHRFLKR 676

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R V+      D     P     + + +       + ++ +++  +L  + A+A V+ L
Sbjct: 677 LWRMVNEHTAGGDAPAVDPANLNGAQKDLRRKTHETIAKVSDDISRRLTFNTAIAAVMEL 736

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++EV R         L    P   +    V  E +    ++L   VP + + ++  L  +
Sbjct: 737 LNEVGR---------LSDDEPQSRA----VRQEALDTAVLVLSPIVPHICHNLWQALGHS 783

Query: 481 D 481
           D
Sbjct: 784 D 784


>gi|324114763|gb|EGC08731.1| leucyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVTDEK 793


>gi|12585346|sp|O58052|SYV_PYRHO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 891

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 15/262 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIY--WPAF 278
           ++  W+D+    L  T + +               +P  L   G DI+R  A Y     +
Sbjct: 453 VLDCWVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +L+   P    V +       G K+SKS GNV+ P EVI + G DALR +       G+D
Sbjct: 513 VLTGKKPWKDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTALA-PPGED 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +  + +    N      + N + R     +KD+D            D+ ILS   R++
Sbjct: 572 HPFKWETVD--YNYRFLQKVWN-IYRFAERHIKDFDYEKYRDVELEPLDKWILSRLHRII 628

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   E ++    +    ++I+ +     D Y +  K + L   + +          E++ 
Sbjct: 629 KFATEELERYRFNLITRELITFIWHEVADDYIEMIK-YRLYGEDEESKLKAKVALYELLY 687

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            + +LL  FVP +  +I+  +F
Sbjct: 688 NVMLLLAPFVPHITEEIYHAIF 709



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 13/169 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  ENKPSYAIDTPPPFTSGTLHLGHVLSHTWIDIIARYKRMRGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +     TK            +  Q     R     +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGITKDQPEEFLKKCVEWTWQAIEAMRKQFIRIGYSADWDLEYHTMDDWYKAAVQR 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +   KG IY+  +  ++  +        EV    +  Y      P+
Sbjct: 151 SLLEFYKKGLIYREEHPVYWCPKCRTSLAKAEVGYVEEEGYLYYIKLPL 199


>gi|194439889|ref|ZP_03071952.1| leucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|253774372|ref|YP_003037203.1| leucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160724|ref|YP_003043832.1| leucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300931577|ref|ZP_07146890.1| leucyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|194421183|gb|EDX37207.1| leucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|242376417|emb|CAQ31117.1| leucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325416|gb|ACT30018.1| leucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972625|gb|ACT38296.1| leucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976819|gb|ACT42489.1| leucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300460626|gb|EFK24119.1| leucyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|323963211|gb|EGB58779.1| leucyl-tRNA synthetase [Escherichia coli H489]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|323938404|gb|EGB34658.1| leucyl-tRNA synthetase [Escherichia coli E1520]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE+ +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFMLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|253686789|ref|YP_003015979.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753367|gb|ACT11443.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 951

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/396 (17%), Positives = 133/396 (33%), Gaps = 85/396 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAAVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDANGNVYVGRTESEVRSENNLADDVVLNQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                KA   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPDLKAFH-PSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFHTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFGAGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE +       A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWILAEFNRTVKAYREALDGYRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +        +  V V+  L  L    +P +   I+
Sbjct: 727 GSEAELRGTRHTLVTVLEALLRLAHPIIPFITETIW 762



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWQWKGESGGNITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENREVKGSMWHLRYPL 204


>gi|222032402|emb|CAP75141.1| Leucyl-tRNA synthetase [Escherichia coli LF82]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D         TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDVLTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|218557580|ref|YP_002390493.1| leucyl-tRNA synthetase [Escherichia coli S88]
 gi|189083239|sp|Q1RER9|SYL_ECOUT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083240|sp|A1A8R7|SYL_ECOK1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695254|sp|B7MFR5|SYL_ECO45 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218364349|emb|CAR02024.1| leucyl-tRNA synthetase [Escherichia coli S88]
 gi|294492674|gb|ADE91430.1| leucyl-tRNA synthetase [Escherichia coli IHE3034]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 107/323 (33%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|188492093|ref|ZP_02999363.1| leucyl-tRNA synthetase [Escherichia coli 53638]
 gi|188487292|gb|EDU62395.1| leucyl-tRNA synthetase [Escherichia coli 53638]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     + + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRIWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|74311178|ref|YP_309597.1| leucyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|123746031|sp|Q3Z4F0|SYL_SHISS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|73854655|gb|AAZ87362.1| leucine tRNA synthetase [Shigella sonnei Ss046]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|30062169|ref|NP_836340.1| leucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479706|ref|NP_706568.2| leucyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|48428544|sp|Q83LX5|SYL_SHIFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30040414|gb|AAP16146.1| leucine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383257|gb|AAN42275.2| leucine tRNA synthetase [Shigella flexneri 2a str. 301]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E ++ +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALQAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|251790538|ref|YP_003005259.1| leucyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539159|gb|ACT07780.1| leucyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  + T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIEYMKNQLKLLGFGYDWDREVATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++   +   ++           G      ++ +  T       PD    + YV + A 
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSEGVEITFRIADADDTLTVYTTRPDTFMGVTYVAVAAG 264



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 20/183 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V + V               A TE  +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWKQVYDHTGKGATQPLDTAALTEDQKALRRDLHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++            +L K  P  A     +T E +  +  +L  F P     +++ L  
Sbjct: 732 LMN------------KLAKA-PQDAEQDRALTQETLLAVVRMLYPFTPHACFVLWNELKG 778

Query: 480 ADE 482
             +
Sbjct: 779 EGD 781


>gi|229828682|ref|ZP_04454751.1| hypothetical protein GCWU000342_00748 [Shuttleworthia satelles DSM
           14600]
 gi|229793276|gb|EEP29390.1| hypothetical protein GCWU000342_00748 [Shuttleworthia satelles DSM
           14600]
          Length = 1065

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/467 (14%), Positives = 137/467 (29%), Gaps = 23/467 (4%)

Query: 41  DGLDVLFTTGTDEHG-QKIAKAAQNAGVTTKVFVDQNSRNFRDM-----ADVLDISYDDF 94
              D+ F    DE G  K                  N     D       +   + +D  
Sbjct: 345 RKYDLPFVQMVDEKGCMKAETPFAGMRCKPTEEEMANGAKSADPAVLTDLEERGLLFDAP 404

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
               +  H   C       + +    K         +D+   N+  V             
Sbjct: 405 SFEHDYPHCWRCDTPLLYFARESWFIKMTAV-----KDDLVKNNKSVNWIPPSIGEGRFG 459

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           N ++ +++ G            +   +          R   V     + + D+ L R   
Sbjct: 460 NWLENIQDWGISRNRYWGTPLNIWECDDCGHQECIGSRAELVERTGDAAMADIELHRPYI 519

Query: 215 DW---GIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           DW          P +    ++ VW D+         Y         + +PAD      D 
Sbjct: 520 DWVTFPCPHCGKPMHRVPEVVDVWFDSGAMPYAQHHYPFENQDKFEQQFPADFISEAVDQ 579

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+++   + +L    P    +     +  KG+K+SKS GN +DP+E +   G DA+
Sbjct: 580 TRGWFYSLMAESTILFGRAPYKNVIVLGHVLDGKGQKMSKSKGNAVDPMEALSTYGADAI 639

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAF 383
           R++            +    +++     L           +   +  +D           
Sbjct: 640 RWYFYTNSNPWLPNKFHGKAVEEGQRKFLNTLWNTYAFYVLYANIDAFDPTKYRLQTDQL 699

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPD 442
           +  D   LS  +  ++ + EN+    I  A   +   + ++ + Y    +     K    
Sbjct: 700 SVMDRWALSRLNSTVKAVDENLGAYRIPEAGRALQDFIDDLSNWYVRRSRQRYWAKGLEQ 759

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                       +     L    +P + ++I+  L  + +    +S+
Sbjct: 760 DKINAYLTLYTCLVTFVKLAAPMIPFMTDEIYRNLVCSLDADAPESV 806



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++            N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 38  KKQSTFTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGNFVPRKAGWDTHGLPVEIG 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D    T +   
Sbjct: 98  VEKKLGLDGKDQIEEYGIQPFVEQCKESVWEYKGMWEDFSGAVGFWADMDHPYITYDNNF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DK  +YKG     Y  R     +  EV +G  
Sbjct: 158 IESEWWGLKQIWDKKLLYKGFKVVPYCPRCGTPLSSQEVAQGYK 201


>gi|291616047|ref|YP_003518789.1| ValS [Pantoea ananatis LMG 20103]
 gi|291151077|gb|ADD75661.1| ValS [Pantoea ananatis LMG 20103]
          Length = 951

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 140/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRAENNLAADVALRQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPSG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGQNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILTEFNHTVKAYREALDSYRFDIAANILYDFTWNQFCDWYLELTKP-VMNS 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            +        +  V V+  L  L    +P +   I+  +     ++D+    Q   Q
Sbjct: 727 GSESELRGTRHTLVHVLEALLRLAHPIIPFITETIWQRVKGLKNISDDTIMLQPFPQ 783



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|148642335|ref|YP_001272848.1| valyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148551352|gb|ABQ86480.1| valyl-tRNA synthetase, ValS [Methanobrevibacter smithii ATCC 35061]
          Length = 905

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 120/355 (33%), Gaps = 21/355 (5%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS-- 210
           + N V    +        + +       +      +P+    +    +   ++DL +   
Sbjct: 394 EMNWVPEHMKSRMINWADSMEWDWCISRQRLFATPIPVWFCKDCGKVMLPDVEDLPVDPT 453

Query: 211 ----RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
               +K    G +     + ++  W+D+  + L+  G+ +         +PA++   G D
Sbjct: 454 HDKPKKACSCGCEEFIGEEDVLDTWMDSSISPLSIAGWPNEGY---ENNFPANIRPQGHD 510

Query: 267 ILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+R  A Y       L+   P    V +       G K+SKS GNVI P EVIE+ G DA
Sbjct: 511 IIRTWAFYTTLRCLALTGKKPFDDIVINGMVFGEDGYKMSKSRGNVIAPDEVIEQYGADA 570

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR +       G D  +D   +K            N        I  +          F 
Sbjct: 571 LRTW-AANSVPGSDVIFDWKDIK--HGYRFLRKFWNAFRFISMQIFDEEVNYDEIKDNFD 627

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-- 440
             D  ILS  + + + +     N      +  +   +     D Y +A K + L   +  
Sbjct: 628 PLDLWILSKLNNLNKVVDNAFANYDFATTITSIEKFIWHDFCDEYIEAVK-YRLYNDDVS 686

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
                   Y    VI     LL   VP  A +++      +      +  +++ L
Sbjct: 687 DSSRKAAKYTLRNVIETSLKLLSPIVPFFAEEVYQYFGDGESIHKTSWPEVNEDL 741



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 58/159 (36%), Gaps = 15/159 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  I T   YP    H+GH    +  D+ AR+ RL GLDVLFT G D HG       
Sbjct: 35  TKPRYIIDTPPPYPTGSIHLGHVLNWVYIDMNARYRRLKGLDVLFTQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                 QN    +D    L  S D      T    +    +
Sbjct: 95  EETHGIKKNDVSRAKFREYCIELTTQNIAKMKDQMQALGFSQDWSREFITMTPEYMKRTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             + K+ D+G IY+G +   +  R E      EV    +
Sbjct: 155 YSFLKMYDEGLIYQGIHPVNWCPRCETAIAFAEVEYSDN 193


>gi|254302086|ref|ZP_04969444.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322278|gb|EDK87528.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 859

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 139/417 (33%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     P  + E+ G     
Sbjct: 387 FNGLSSKDALVKIAEYVEEKGYGKRTYKYRLKDWGISRQRYWGTPIPALYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  NE              +        +   D      
Sbjct: 447 DENLPVLLPNDIEFSGNGNPLETSNEFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPL------------------------PKKVF---------SHGFILHKGEKISKSL 307
           S+N P                         PK V          S   +  K EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLLPKDVVIKGDKAYSQSGEELQIKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L+
Sbjct: 668 LVFENSELVKNANDEIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 728 NEVQTYVSSSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|119471266|ref|ZP_01613769.1| valine tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445732|gb|EAW27015.1| valine tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 951

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 137/399 (34%), Gaps = 86/399 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R++   +      ++     +P +  N   S++   ++D  +SR+   W
Sbjct: 371 IEPLLTDQWYVRVAPLAEPAKDAVKNGDIQFVPKQYENMYFSWMND-VQDWCISRQ-LWW 428

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDSEGNVYVGRDEAEVRRDNNIADSVALSQDEDVLDTWFSSALWTFSTQGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P+D+ V G DI+ F         L           +P      +      
Sbjct: 489 NTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTLHFIKDENGKPQVPFKTVYVTGLIRDD 547

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 548 NGDKMSKSKGNVLDPLDMIDGIELEDLVQKRTGNMMQPKLAAKIEKDTRKVFANGIEAHG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D + L+     +  N + N  SR V M  ++ D       
Sbjct: 608 TDALRFTLAAMASTGRDINWDMNRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFANDA 664

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
              ++ +D  IL      ++   E++ N     A   +         D Y +  KP  L 
Sbjct: 665 QKEYSLADRWILGQYEATVKTYTEHLDNYRFDLAANTLYEFTWNQFCDWYLELTKP-VLF 723

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           K +  +        + V+  L  L+   +P +   I+  
Sbjct: 724 KGSEAQQRGTRNTLITVLESLLRLMHPMMPYITETIWQR 762



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 21/167 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L RF R+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTDHAGIATQMLVERKLHAE 95

Query: 70  -----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILW 110
                              + +++          L   + +D    T +    +  + ++
Sbjct: 96  EGKTRHDLGREDFINKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGLSEAVKEVF 155

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  +  IY+G     +  +     +D EV       +      P+
Sbjct: 156 VRLHKENLIYRGKRLVNWDPKLHTAISDLEVENKDKQGHMWNLRYPL 202


>gi|294784860|ref|ZP_06750148.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486574|gb|EFG33936.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 859

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 67/417 (16%), Positives = 140/417 (33%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  ++ K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLNSKEALVKIAEYVEEKGYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DKNLPVLLPDDIEFSGNGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPLPK------------------KVFSHGFILHKG---------------EKISKSL 307
           S+N P  +                  K      ++ KG               EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVIKGDKAYSQSGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L+
Sbjct: 668 LVFENSELVKNANDEIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 728 NEVQTYVSSSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|256044614|ref|ZP_05447518.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265991040|ref|ZP_06103597.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263001824|gb|EEZ14399.1| valyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 434

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 17/257 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
           ++  W  +     +T G+ D      A ++P  + V G DIL F    W A ++   L  
Sbjct: 2   VLDTWFSSALWPFSTLGWPDKTP-ELATYYPTSVLVTGFDILFF----WVARMMMMGLHF 56

Query: 287 PKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            +++  H   LH       G K+SKS GNVIDP+E+++E G DALR+ L    A G+D  
Sbjct: 57  MEEIPFHTVYLHALVRDKHGAKMSKSKGNVIDPLELMDEYGADALRFTLAIMAAQGRDVK 116

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D   +      +    + N  +R   M             A    +  IL+  +R  + 
Sbjct: 117 LDPARIAG--YRNFGTKLWN-ATRFAQMNGVKLAPDFRPENAKLAVNRWILTELTRATRA 173

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E +     + A       V     D Y +  KP      +    +         + Q+
Sbjct: 174 VTEGIATYRFNEAAGAAYRFVWNQFCDWYLEFLKP-IFMGDDEAAKAEAQATAAYCLDQV 232

Query: 459 AILLQAFVPKLANKIFD 475
             LL  F+P +  +++ 
Sbjct: 233 YKLLHPFMPFMTEELWS 249


>gi|253998286|ref|YP_003050349.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984965|gb|ACT49822.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 826

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+ + H+GH     I DVL+RFHR+ G +V+   G D  G     A
Sbjct: 30  SDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHRMKGFNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  + +       L I +   I T +  ++   + L+ ++  KG I
Sbjct: 90  AIKNNVAPAGWTYSNIEHMKTQLKSLGLGIDWQREIATCKPEYYRWEQWLFTELFKKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  +   YF +++AY D+LL+ 
Sbjct: 150 YKKTATVNWDPVDQTVLANEQVIDG----RGWRSGAIVEKRDIPQYFMKITAYADELLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLEGWPEQVKTMQRNWIGKSYG 229



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 100/268 (37%), Gaps = 40/268 (14%)

Query: 228 MYVWIDALTNYLTTTGYLDN--PDGSKAKFW-PADLHVIGKDILRFHAIY-------WPA 277
           +  + ++   Y     +  +      +A +W P D ++ G +    H +Y          
Sbjct: 497 LDTFFESSWYYARYASFDTDKAMVDERANYWLPVDQYIGGIEHAILHLLYARFFNKLMRD 556

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L  N     K+ + G +L  G K+SKS GN +DP  +IE+ G D  R F++      +
Sbjct: 557 VGLLKNDEPFNKLLTQGMVLKDGSKMSKSKGNTVDPQALIEQYGADTARLFMMFAAPPEQ 616

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-------MIPTPGAFTESDESI 390
              +   G++         G    + R  + +    +           + G      +++
Sbjct: 617 SLEWSDAGVE---------GAHRFLKRVWAAVAAHVEHGVVSAYSAATSTGELNAELKTL 667

Query: 391 LSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                  +++I ++   +   + A+A V+ L   ++ Y       +L+  +         
Sbjct: 668 RRQLHLTIEKISDDYGRRHAFNTAIAAVMEL---MNAY------AKLEGQDD----VTRS 714

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V  EV+    +LL   VP ++  ++  L
Sbjct: 715 VRQEVLEHAILLLSPIVPHISQALWSEL 742


>gi|189030341|sp|A1U4A0|SYL_MARAV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 861

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++    L   YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IANKSAPAKWTRSNIDYMKNQLKQLGFGYDWSRELATCDPEYYRWEQWFFARLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  +   +F R++ Y ++LL+  
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVVDG----RGWRSGALVEQKKIPQWFIRITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E    +   ++           G
Sbjct: 207 EDMEGWPEQVKTMQRNWIGKSVG 229



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 20/181 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I++ G D +R F++      +   +   G++       A+     
Sbjct: 620 KMSKSKNNGIDPQAIIDQHGADTVRLFMMFAAPPEQSLEWSDSGVEG------AHRFLKR 673

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R V+      D     P     + + +       + ++ +++  +L  + A+A V+ L
Sbjct: 674 LWRMVNEHTAGGDAPAVDPANLNGAQKDLRRKTHETIAKVSDDISRRLTFNTAIAAVMEL 733

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++EV R         L    P   +    V  E +    ++L   VP + + ++  L  +
Sbjct: 734 LNEVGR---------LSDDEPQSRA----VRQEALDTAVLVLSPIVPHICHNLWQALGHS 780

Query: 481 D 481
           D
Sbjct: 781 D 781


>gi|99081547|ref|YP_613701.1| valyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99037827|gb|ABF64439.1| valyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 1031

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/293 (21%), Positives = 110/293 (37%), Gaps = 16/293 (5%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           +++  DP  ++  W  +    + T G+ +  +   +K++P    V G+DIL F    +  
Sbjct: 588 VQLRRDPD-VLDTWFSSGLWPIGTLGWPEWTE-ETSKYFPTSTLVTGQDILFFWVARMMM 645

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +   +P             KG+K+SKS GNVIDP+E+I+E G DALR+      + 
Sbjct: 646 MQLAVVDQIPFDTVYLHGLVRDAKGKKMSKSTGNVIDPLEIIDEYGADALRFTNAAMASL 705

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G     D   +      +    + N V R   M     D +              +  I+
Sbjct: 706 GGVLKLDMQRIAG--YRNFGTKLWNAV-RFAEMNEVFTDAVPQLTVDDLAPKAAVNAWIV 762

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
              +RV + + E M+    + A   +   V     D Y +  KP  L+  + +  +    
Sbjct: 763 GETARVREAVDEAMETFRFNDAAQALYGFVWGKVCDWYVELSKP-LLQGDDTEAQAETRA 821

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
               V+ Q  ILL   +P +  +++         +     D        L K 
Sbjct: 822 TMRWVMDQCMILLHPIMPFITEELWGA--TGPRAKMLVHADWPTYKAADLVKP 872



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 34/196 (17%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G       +    
Sbjct: 56  CIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGYDTLWQPGTDHAGIATQMVVERKLA 115

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLDISYDDF------------IRT- 97
            T+                  + +Q+     +    L  S D               RT 
Sbjct: 116 ETQQPSRRELGREKFLEKVWEWKEQSGGTIINQLKRLGASCDYERTAFTMAGAQGDTRTG 175

Query: 98  --TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++ ++ +KG IY+G     +    E   +D EV       +      
Sbjct: 176 HENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKY 235

Query: 156 PVQWMEEEGYFFRLSA 171
           P+   E   Y  +   
Sbjct: 236 PLAGGETYTYIEKDED 251


>gi|256846013|ref|ZP_05551471.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719572|gb|EEU33127.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 859

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 70/412 (16%), Positives = 139/412 (33%), Gaps = 67/412 (16%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  ++ K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLNSKEALVKIAEYVEEKGYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGNGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPLPK------------------KVFSHGFILHKG---------------EKISKSL 307
           S+N P  +                  K      ++ KG               EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVIKGDKAYSQSGEKLQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL           +  LV  +  
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRVWRLVFENSE 674

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDR 426
           +I K  D +       ++ D+++L   ++ ++++ + ++ N   + A+A  + L++EV  
Sbjct: 675 LIKKSNDKI--DYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFNTAIAANMELINEVQT 732

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 733 YVSSSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|251773415|gb|EES53964.1| valyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 889

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 133/361 (36%), Gaps = 47/361 (13%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  V+      +F R++    +      S      P         ++   ++D  +
Sbjct: 356 CYRCQTEVEPRLSLQWFVRMAPLAARAREAVSSGQIRFFPASWVKTYYEWID-NIRDWCV 414

Query: 210 SRKTFDWGIKI----PDDPQY------------------------IMYVWIDALTNYLTT 241
           SR+   WG +I      D  +                        ++  W  +      T
Sbjct: 415 SRQ-IWWGHRIPAWSCSDCGHLAVLRDDPSVCPACQSPNITRDPDVLDTWFSSALWPFAT 473

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK 299
            G+ +      A+F+P  L V G DIL F    +      L+  +P  + V+ H  +  +
Sbjct: 474 LGWPEETP-DLARFYPTSLLVTGFDILFFWVARMIMMGLYLTDRIPF-RDVYIHALVRDE 531

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K++KS GNV+DP+E+++  G DA R  L    + G+D     + ++   N    + +
Sbjct: 532 FGQKMTKSRGNVVDPLELMDRFGTDAFRLSLALLASPGRDIRLSVERVEAARN--FVSKL 589

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N       ++ ++   +         ++  ILS   R  +E R+ M++  +  A   V 
Sbjct: 590 WNAFRFISRVVPRETPFLSRPGEVRGMANRWILSELVRTEREYRDAMESYRVDEAALLVY 649

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ----LAILLQAFVPKLANK 472
                   D Y +A K       + D A  + + T+  +R     L  L   F+P +  +
Sbjct: 650 RFTWSLFCDWYLEAAK----VDVDRDSADPLRHETLSTLRTVGAALLDLAHPFLPFVTEE 705

Query: 473 I 473
           +
Sbjct: 706 L 706



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 20/151 (13%)

Query: 13  IAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT- 69
           I  PN   + H+GHA  + I DV+AR+HR+ G DVL+  G D  G       +       
Sbjct: 52  IPPPNITGRLHMGHALNLTIQDVMARYHRMAGDDVLWIPGVDHAGIAAQNVVEKKLRAEG 111

Query: 70  ---------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKK 112
                            + D       D    L   +S+D    T +       R ++ +
Sbjct: 112 VDFKSLGRDEFVARVWEWKDSIGSGIGDQIRRLGASLSWDHERFTMDPGFSRAVREVFVR 171

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + + G +Y+      +  R     +D EV  
Sbjct: 172 LYEDGALYRAERMIHWCPRCLTALSDVEVTH 202


>gi|78186311|ref|YP_374354.1| isoleucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|78166213|gb|ABB23311.1| Isoleucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 1089

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 11/269 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G++    P+ ++ VW D+ +       Y         + +PAD    G D     F+ ++
Sbjct: 545 GVRFTRTPE-LIDVWFDSGSMPFAQLHYPFENRELFEQTFPADFIAEGVDQTRGWFYTLH 603

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + LL         + +   +   G+K+SKS GNV+DP E +++ G DA+R++L+    
Sbjct: 604 AVSTLLFDRPAYRNLIVNGHILDKNGQKMSKSKGNVVDPFETMQKYGADAIRWYLLVASP 663

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILS 392
             +   ++ + +++         I +     +   +  + G  P       +E D  +LS
Sbjct: 664 PWRPKSFNTEEIEEEQRKFFRAYINSYNFFVLYANVDGFTGSEPAVPLLQRSELDRWVLS 723

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVL 448
             S ++  +   M+   +  A   V   +     + Y     ++ W+     PD+ +   
Sbjct: 724 SLSSLVGGVHSRMEQYDLTGAARLVDDFIVDDLSNWYIRRSRKRFWK-SDMGPDKLAA-Y 781

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               + +  LA LL  F P LA +I+  L
Sbjct: 782 QSLHQCLETLARLLAPFTPFLAERIYLNL 810



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-----NAGV 67
               N +P + H +   I D + R+  + G  V    G D HG  +  + +         
Sbjct: 56  PPTVNGKPGVHHVFSRTIKDAVCRYRTMQGYRVPRKAGWDTHGLPVEISVEKKLGLKNKA 115

Query: 68  TTKVF----------------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
             + +                +D N   +  + + +   +  D    T E  + ++    
Sbjct: 116 QVEEYGEGEFNAEARALVYHHIDDNREGWGKLTERMGYWVDMDHPYITCENNYIESVWWA 175

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 176 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 212


>gi|254476459|ref|ZP_05089845.1| valyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214030702|gb|EEB71537.1| valyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 1037

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 19/270 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIY 274
           I I  DP  ++  W  +    + T G+ ++      K++P    V G+DIL F     + 
Sbjct: 590 ITITRDPD-VLDTWFSSGLWPIGTLGWPEDTA-EMQKYFPTSTLVTGQDILFFWVARMMM 647

Query: 275 WPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +L  +LP+ +++      LH      KG+K+SKS GNV+DP+++I+E G DALR+ 
Sbjct: 648 MQLAVLDQDLPVEQRIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLDIIDEYGADALRFT 707

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESD 387
                + G     D   +      +    + N V+ +    + D D      P A    +
Sbjct: 708 NAAMASLGGVLKLDMQRIAG--YRNFGTKLWNAVNFAHFNNVYDADTPAYDIPDAKAAVN 765

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA- 444
           + I+   ++V  E+   +     + A   + + V     D Y +  KP  L  ++ +   
Sbjct: 766 QWIIGETAKVRVEVDAALDAYRFNDAALGLYAFVWGKVCDWYIELSKP--LFNSDDEAVI 823

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +        V+ Q  ILL   +P +  +++
Sbjct: 824 AETRQTLGWVLDQCMILLHPIMPFITEELW 853



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 59/188 (31%), Gaps = 33/188 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   I           H+GHA+   + D+L R+ R+ G D L+  GTD  G      
Sbjct: 33  KRSDTYSIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGYDTLWQPGTDHAGIATQMV 92

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT------- 98
            +                        + +++     +    L  S D F RT        
Sbjct: 93  VERELAKDGKKRTDFSRPEFLQKIWEWKEKSGGTIIEQLKRLGASCD-FERTAFTMAGAQ 151

Query: 99  ---------EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
                        HD    ++ ++ +KG IY+G     +    E   +D EV       +
Sbjct: 152 GDTRTGHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGH 211

Query: 150 YNAQHNPV 157
                 P+
Sbjct: 212 MWHFKYPL 219


>gi|15612145|ref|NP_223797.1| valyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135055|sp|Q9ZK61|SYV_HELPJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4155674|gb|AAD06660.1| VALYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 872

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHVHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N  S  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAASY-LKLKQESFKDKERLNEYQTALGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+L R+ R+DG   L+  G D  G   
Sbjct: 35  IQEKGKRFCLMMPP-PNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +   ++                   + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLSQGVKKEDLGREKFIQKVWEWKEKSGGAILEQMKRLGVSTAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIVQDNYMVNWCTKDG 186


>gi|320450628|ref|YP_004202724.1| isoleucine-tRNA ligase [Thermus scotoductus SA-01]
 gi|320150797|gb|ADW22175.1| isoleucine-tRNA ligase [Thermus scotoductus SA-01]
          Length = 1043

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 130/395 (32%), Gaps = 59/395 (14%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E        +      P+ +   E +F + + ++++L+    +     +P   +     
Sbjct: 378 KEESYLHSYPHCWRCSTPLMYYATETWFIKNTLFKEELIRK--NQEINWVPPHIKEGRYG 435

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP------------------------------DDPQ--- 225
                L D +LSR    WG  +P                               DP    
Sbjct: 436 EWLRNLVDWALSRNR-YWGTPLPIWVCATCGKEEAIGSIQELRERATHPLPEPFDPHRPY 494

Query: 226 ------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                             Y++ VW D+      +  Y         + +PAD    G D 
Sbjct: 495 VDAVELRCSCGGTMRRVPYVIDVWYDSGAMPFASLHYPFENGEEFKEAFPADFIAEGIDQ 554

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F++++    +L  ++     +     +  KG+K+SKS GNV+DP ++I E G DAL
Sbjct: 555 TRGWFNSLHQLGVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVVDPWDIIREFGADAL 614

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-T 384
           R+++        D  +  + +++ V                   L   D   P P     
Sbjct: 615 RWYIYISAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYANLDQPDLKNPPPVEKRP 674

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD 442
           E D  +L+    ++Q + E ++     ++   +   V       Y    +    K  +P 
Sbjct: 675 ELDRWLLARLQDLIQRVTEALEAYDPTQSSRALRDFVVEDLSQWYVRRGRRRYWKNEDPL 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +      + +  ++ L   F P LA  ++  L
Sbjct: 735 DRESAYATLYQALVTISQLSAPFTPFLAEVLWQNL 769



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 19/187 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +  I       N  PH+GHA      D+  R+  + G  V    G D HG  +   
Sbjct: 35  KGRPRYTIYEGPPTANGMPHVGHAQARSYKDLFPRYKTMRGYYVPRRAGWDTHGLPVELE 94

Query: 62  AQNA--GVTTKVFVDQNSRNFRDMADVLDISYDDF-----------------IRTTEKRH 102
            +      + +         F         +Y+                     T    +
Sbjct: 95  VEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLKNAYATLHPTY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K + D+G +Y+      Y  R     +  E+  G       + +  +   E 
Sbjct: 155 VESIWWSLKNLFDRGLLYRDHKVVPYCPRCGTPLSSHELSLGYKEITDPSVYVRLPLKEP 214

Query: 163 EGYFFRL 169
           E    + 
Sbjct: 215 EKLGLKQ 221


>gi|294637503|ref|ZP_06715789.1| leucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089335|gb|EFE21896.1| leucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 860

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   YD    I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKLLGFGYDWSREIATCKPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G          + V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPNDQTVLANEQVIDG----CCWRCDSKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DKLEDWPEQVKTMQRNWIGRSEG 229



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 97/298 (32%), Gaps = 72/298 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----------------- 279
           Y          D   A +W P D +V G +    H +Y+  F                  
Sbjct: 503 YTCPQFDQGMLDPEAANYWLPVDQYVGGIEHAIMHLMYFRFFHKLMRDAGLVDSDEPAKR 562

Query: 280 ----------------LSANLPLPKKVFSHGFILHKGE------------------KISK 305
                           ++        V        KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTGVNGERNWVSPVDVTVERDDKGRITKATDRDGRELIYAGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
               ++          A  +  +++     + + ++ +++  +   + A+A V+ L++++
Sbjct: 677 AYDHVQKGPTGALDLSALNDDQKALRRDLHKTIAKVSDDIGRRQTFNTAIAAVMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            R      P   +++  DRA     +  E +  +  +L  F P +   ++  L  A +
Sbjct: 737 TR-----AP---QESEQDRA-----LMQEALLAVVRMLYPFTPHVCFTLWHALGGAGD 781


>gi|194337305|ref|YP_002019099.1| isoleucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309782|gb|ACF44482.1| isoleucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 1085

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 11/298 (3%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G +    P+ +  VW D+ +       Y           +PAD    G D     F+ ++
Sbjct: 539 GKRFNRTPELV-DVWFDSGSMPFAQLHYPFEHREEFDASFPADFIAEGVDQTRGWFYTLH 597

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A L+         + +   +   G+K+SKS GNV+DP E +E  G DALR++L+    
Sbjct: 598 AIATLIFDKPAYKNLIVNGHILDKSGQKMSKSKGNVVDPFETMERYGADALRWYLLVASP 657

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILS 392
             +   ++ D +++         I +     +   +  +    P       +E D  +LS
Sbjct: 658 PWRPKSFNSDEIEEEQRKFFRAFINSYNFFVLYANVDRFTFAEPIIPVQERSELDRWVLS 717

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVL 448
             + ++  +   M+   +  A+  +         + Y     ++ W+     PD+ +   
Sbjct: 718 CLNSLVDAVHMRMEQYDLTGAVRLINDFTVDDLSNWYIRRSRKRFWK-SDMGPDKIAA-Y 775

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
                V+  L+ LL  F P LA +IF  L         +S+     P   L     P+
Sbjct: 776 QTLYGVLETLSKLLAPFTPFLAERIFLNLNRVSGLDSAESVHLADFPLLDLSAIDRPL 833



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--------- 63
               N +P + H +   I DV+ R+  + G  V    G D HG  +  + +         
Sbjct: 50  PPTVNGKPGVHHVFSRTIKDVVCRYKTMQGYRVPRKAGWDTHGLPVEISVEKKLGLKNKA 109

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRIL 109
                        A       +D N   +  + + +    D      T    + ++    
Sbjct: 110 QVVAYGDGEFNAEAKALVYHHIDDNREGWGKLTERMGYWVDMEHPYITCTNDYIESVWWA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 170 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 206


>gi|50119360|ref|YP_048527.1| valyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827246|sp|Q6DA54|SYV_ERWCT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49609886|emb|CAG73321.1| valyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 951

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 139/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAAVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDANGNVYVGRTEAEVRSENNLADDVVLNQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K+   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPDLKSFH-PSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFNTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  R+ +       A   +         D Y +  KP  +  
Sbjct: 668 MELSLADRWILAEFNRTVKAYRDALDGYRFDIAANILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DIL-FVADENRCFQSLDQ 491
            +        +  V V+  L  L    +P +   I+     L  + D+    Q   +
Sbjct: 727 GSEAELRGTRHTLVTVLEALLRLAHPIIPFITETIWLRVKALKGINDDTIMLQPFPE 783



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           F+D+  +             R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKGESGGNITNQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPL 204


>gi|253995955|ref|YP_003048019.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982634|gb|ACT47492.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 813

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+ + H+GH     I DVL+RFH++ G +V+   G D  G     A
Sbjct: 30  SDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHKMKGFNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + +       L + ++  I T +  ++   + L+ ++  KG I
Sbjct: 90  AIKNETAPAAWTYSNIEHMKAQLKQLGLGVDWNREIATCKPEYYKWEQWLFTELYKKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   YF +++AY ++LL+ 
Sbjct: 150 YKKTSTVNWDPVDGTVLANEQVIDG----RGWRSGALVEKRDIPQYFMKITAYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLEGWPEQVKTMQRNWIGKSYG 229



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 95/239 (39%), Gaps = 28/239 (11%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHK 299
               +A +W P D +V G +    H +Y            L  N      + + G +L +
Sbjct: 509 MADERANYWLPVDQYVGGIEHAILHLLYARFFNKLMRDVGLIKNDEPFTNLLTQGMVLKE 568

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN +DP E+I+  G D  R F++      +   +   G++       A+   
Sbjct: 569 GTKMSKSKGNTVDPQELIDTYGADTARLFMMFAAPPEQSLEWADSGVQG------AHRFL 622

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
             + ++    +          G      +++       ++++ ++   +   + A++ V+
Sbjct: 623 RRLWQATYDHVALGATTAYVSGELNAELKTLRRQLHLTIEKVADDYGRRHSFNTAISSVM 682

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L++ + +         ++ T+         V  EV++ +A+LL   VP +   ++  L
Sbjct: 683 ELMNSLGK---------VEGTDDISRQ----VRQEVLQNVALLLSPIVPHICQALWAEL 728


>gi|226226689|ref|YP_002760795.1| valyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089880|dbj|BAH38325.1| valyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 915

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/390 (19%), Positives = 131/390 (33%), Gaps = 59/390 (15%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                 ++       V+ +  + +F R+    DK L+   +    ILP  R   V     
Sbjct: 352 NHQHSVRHCYRCDTVVEPLLSDQWFVRMQPLADKALAALRTGELRILPE-RWEAVYVNWL 410

Query: 202 SGLKDLSLSRKTFDWGIKIP-----------------------------DDPQYIMYVWI 232
            G++D ++SR+   WG ++P                                + ++  W 
Sbjct: 411 EGIRDWNISRQ-IWWGHRVPVWYCNASCGHAPIVSRTDVTSCPGCGGTVRQDEDVLDTWF 469

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +T G+ D+    +A F+P D+ V   +IL F    +           P     
Sbjct: 470 SSWLWPFSTLGWPDDTPDLRA-FYPGDVLVTAPEILFFWVARMVMSGCWFLDKPPFHTVY 528

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   +  K+SKSLGN IDP++V+   G DALR+ +V  +  G D   D   L+K  
Sbjct: 529 LHGTVRDMQHRKMSKSLGNGIDPLDVVRLYGADALRWTMVAGLGLGVDVMLDPTDLEKSF 588

Query: 351 --NADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENM- 405
               +    + N+    +S +  +         P + T +D  IL      + +    + 
Sbjct: 589 APGRNFCTKLWNIGRFLLSRVGPEPVQPIDSIDPASLTAADHWILERLDTAIADCDAALG 648

Query: 406 -------------QNQ---LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
                        +      +          V     D Y ++ KP  L     DR    
Sbjct: 649 PARPANLATWSEAERYRGLRLSEYAEAARRFVWNELADWYLESVKP-RLATEGADR-EVA 706

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V          LLQ  VP +  +++  L
Sbjct: 707 RAVLAHAFDGALRLLQPVVPFITEELWQQL 736



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 52/155 (33%), Gaps = 20/155 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I        A  H+GH     + DVL R+ R+ G + L+  GTD  G       + 
Sbjct: 43  EPFVIVIPPPNVTAVLHMGHGLNNTVQDVLIRWRRMAGDEALWVPGTDHAGIATQNVVEK 102

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHHDT 105
                                  FVD+      +    +  S D + RT          +
Sbjct: 103 QLAAEGHSRFDVGREAFVERVAQFVDKTGGEILNQLKSIGASAD-WTRTAYTFSPELSRS 161

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            R  + ++ + G +YKG     +  R     +D+E
Sbjct: 162 VREAFVRLHEDGLVYKGHRVIHWCPRCGTSLSDEE 196


>gi|218514802|ref|ZP_03511642.1| valyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 283

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 105/258 (40%), Gaps = 15/258 (5%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
            + ++  W  +     +T G+ D      A+++P ++ V G DI+ F  +      L   
Sbjct: 31  DEDVLDTWFSSALWPFSTLGWPDETP-ELARYYPTNVLVTGFDIIPFWVVRMMQMGLHFM 89

Query: 284 -------LPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +     V+ H  +  K G+K+SKS GNVIDP+E+I+E G DALR+ L    A 
Sbjct: 90  KDDNGDPVEPFHTVYIHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQ 149

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   D   +      +    + N  +R   M     D       A    +  IL+  +
Sbjct: 150 GRDVKLDPARIAG--YRNFGTKLWN-ATRFAEMNGAKSDPHFVPEAAELTINRWILTELA 206

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R  +++ E ++    + A   +   V     D Y +  KP      +    +     +  
Sbjct: 207 RTERDVTEALEAFRFNDAAGALYRFVWNEVCDWYLELLKP-VFNGEDAGAKAEAQACSAY 265

Query: 454 VIRQLAILLQAFVPKLAN 471
           ++ ++  LL  F+P +  
Sbjct: 266 ILEEIYKLLHPFMPFMTE 283


>gi|327396299|dbj|BAK13721.1| valyl-tRNA synthetase ValS [Pantoea ananatis AJ13355]
          Length = 951

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 140/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRAENNLAADVALRQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPSG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGQNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILTEFNHTVKAYREALDSYRFDIAANILYDFTWNQFCDWYLELTKP-VMNS 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            +        +  V V+  L  L    +P +   I+  +     ++D+    Q   Q
Sbjct: 727 GSESELRGTRHTLVHVLEALLRLAHPIIPFITETIWQRVKGLKNISDDTIMLQPFPQ 783



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|317182405|dbj|BAJ60189.1| valyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 872

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 135/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDAPLNCPTCKSGKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSIAHLEN--NKNFANKIFNAVSY-LKLKQESFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKNKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLDQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|170767652|ref|ZP_02902105.1| leucyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170123140|gb|EDS92071.1| leucyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 860

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKK 289
           Y          D   A +W P D+++ G +    H +Y+  F        +  +    K+
Sbjct: 503 YTCPEYKEGMLDSDAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 290 VFSHGFIL--------------------------HKGE------------------KISK 305
           +   G +L                           KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPKDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQEMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTTKGDAPALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     +  DRA     +  E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP---TDSEQDRA-----LMQEALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|312170931|emb|CBX79190.1| valyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 951

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAAGNVYVARSEEEARAENNLAADVVLTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N    +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTAALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D+D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDHDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            A + +D  IL+  +R ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 LALSLADRWILAEFNRTVKAYREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAHLRGTRNTLVNVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
              E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSEESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLHKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|304396393|ref|ZP_07378274.1| valyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355902|gb|EFM20268.1| valyl-tRNA synthetase [Pantoea sp. aB]
          Length = 951

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/417 (17%), Positives = 139/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDNGNVYVGRTEEEVRAENNLAADVALRQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPDGIEPSG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGQNGGD 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILTEFNNTVKAYREALDSYRFDIAANLLYDFTWNQFCDWYLELTKP-VMNS 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            +        +  V V+  L  L    +P +   I+  +     ++D+    Q    
Sbjct: 727 GSESELRGTRHTLVHVLEALLRLAHPIIPFITETIWQRVKGLKNISDDTIMLQPFPH 783



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +    Q                      +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRQDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|312112848|ref|YP_004010444.1| valyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311217977|gb|ADP69345.1| valyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 942

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 102/265 (38%), Gaps = 18/265 (6%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           I +  D   ++  W  +     +T G+ D      A+++P  + V G DI+ F    W A
Sbjct: 501 IPLWRDED-VLDTWFSSGLWPFSTLGWPDETP-ELARYYPTSVLVTGFDIIFF----WVA 554

Query: 278 FLLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++   L   K+V      +       KG K+SKS GNV+DP+ V++  G DALR+ +  
Sbjct: 555 RMMMLGLHFKKEVPFRDVYIHALVRDEKGAKMSKSKGNVVDPLSVMDNYGADALRFTMAA 614

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D       ++     + A  + N             +G  P     T  +  I 
Sbjct: 615 MAAQGRDVKLSMQRIEG--YRNFATKLWNAARFCEMNGCVRKEGFDPAAVKLT-LNRWIY 671

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +        + E ++    + A   V   V     D Y +  KP      +    +    
Sbjct: 672 AEAQATAAAVTEAIEAYRFNDAAGAVYRFVWNRFCDWYLEFAKP-VFMGEDEAAKAETQA 730

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           +    + ++  LL  F+P +  +++
Sbjct: 731 MAAWALDEILKLLHPFMPFVTEELW 755



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 23/178 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + DVLARF+R+ G DVL+  GTD  G       + 
Sbjct: 38  EPYSIVIPPPNVTGSLHMGHALNNTLQDVLARFYRMRGRDVLWQPGTDHAGIATQSLVER 97

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                +                +  +           + +    D S + F  T ++   
Sbjct: 98  QLAEKQEPSRRDLGREEFLRRVWAWKEHSGGTIVNQLKRLGASCDWSRERF--TMDEGLS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                ++  + + G IYK      +  + +   +D EV       +      P++  E
Sbjct: 156 RAVVKVFVDLYNDGLIYKDKRLVNWDPKLQTAISDLEVIPVETKGHLWYFKYPIKDAE 213


>gi|197302179|ref|ZP_03167238.1| hypothetical protein RUMLAC_00905 [Ruminococcus lactaris ATCC
           29176]
 gi|197298610|gb|EDY33151.1| hypothetical protein RUMLAC_00905 [Ruminococcus lactaris ATCC
           29176]
          Length = 1051

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/461 (14%), Positives = 149/461 (32%), Gaps = 24/461 (5%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    DE G                FV +         D   + YD        
Sbjct: 343 RKYDLPFVQLVDEKGNMAESTPFAGL-----FVKKADPEVLKDLDARGLLYD------AP 391

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD----GQYYNAQHN 155
           +   +    W+  +      +  +    + +RD+   N++ +    +    G++ +   N
Sbjct: 392 KFEHSYPHCWRCDTPLIYYARESWFIKMTAVRDDLIANNNTINWIPESIGKGRFGDWIEN 451

Query: 156 PVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              W      ++      +Q +    +       L     N             +++   
Sbjct: 452 VQDWGISRNRYWGTPLNIWQCECGCMHSVGSIEELKSMSDNCPDDIELHRPYIDAVTINC 511

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
            D G ++   P+ ++  W D+ +       Y         K +PAD      D     F+
Sbjct: 512 PDCGKEMHRVPE-VIDCWFDSGSMPFAQHHYPFENQELFEKQFPADFISEAVDQTRGWFY 570

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   + LL    P    +         G+K+SKS GN +DP + +E+ G DA+R++   
Sbjct: 571 SLLAISTLLFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYI 630

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDES 389
             A      +    +++     +           +   + ++D    T         D+ 
Sbjct: 631 NSAPWLPNRFHGKAVQEGQRKFMGTLWNTYAFFVLYANIDNFDATKYTLEYDKLPVMDKW 690

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           ILS  + +++++  N+ N  I  A   +   V ++ + Y    +     K          
Sbjct: 691 ILSKMNTMVKDVDNNLGNYRIPEAARVLQDFVDDLSNWYVRRSRERFWAKGMEQDKINAY 750

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 +  ++      +P +  +I+  L  + +    +S+
Sbjct: 751 MTLYTALVTVSKAAAPMIPFMTEQIYQNLVRSIDKDAPESI 791



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 22/192 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M E+               N +PHIGH    +I D++ R+  + G  V    G D HG  
Sbjct: 32  MDEKEGCPDYIFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLP 91

Query: 58  IAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTT 98
           +    +                       K  V +    + D +  +    D      T 
Sbjct: 92  VELEVEKMLGLDGKDQIEKYGLEPFIKKCKESVWKYKGMWEDFSGTVGFWADMEHPYVTY 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +    ++     KKI DKG +YKG     Y  R     +  EV +G       +     +
Sbjct: 152 DNNFIESEWWALKKIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFK 211

Query: 159 WMEEEGYFFRLS 170
             +E+ Y    +
Sbjct: 212 VKDEDAYILAWT 223


>gi|89092047|ref|ZP_01165002.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083782|gb|EAR62999.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 863

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  QKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R+  + +   YD    + T    ++   +  + K+ DKG +Y
Sbjct: 91  MKNNVAPAKWTYENIDYMRNQLEQMGFGYDWNRELATCHPEYYRWEQWFFTKLMDKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  +   +F +++ Y D+LLS  
Sbjct: 151 KKEAEVNWDPVDQTVLANEQVIDG----RGWRSGALVERKKIPQWFLKITDYADQLLSDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   +    +       G
Sbjct: 207 DQLDQWPEQVRTMQKNWIGRSEG 229



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 73/189 (38%), Gaps = 19/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  +I++ G D +R F++      +   +   G++          +  
Sbjct: 620 SKMSKSKNNGIDPQVMIDKYGADTVRLFMMFAAPPEQSLEWSDSGVEGAQ-----RFLKR 674

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           +  +    +      +       T+  + +     + +Q++ ++++ +   + A+A V+ 
Sbjct: 675 MWKQVFDHLNVGGSSVAIDKDNLTDVQKELRLKVHQTIQKVSDDIERRQTFNTAIAAVME 734

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + + ++ D            ++   V+   +E    L       VP ++++++  L  
Sbjct: 735 LSNTIAKFVDIS----------EQGRAVMQEALEAATLLLA---PIVPHISHQLWQELGH 781

Query: 480 ADENRCFQS 488
             +      
Sbjct: 782 DSDVLTAPW 790


>gi|289643174|ref|ZP_06475302.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata]
 gi|289507005|gb|EFD27976.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata]
          Length = 685

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 94/528 (17%), Positives = 186/528 (35%), Gaps = 34/528 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             +++ +    PN   H+GH A   + AD   RF R++G      TG+D+    +   A+
Sbjct: 120 RPVFVFSTPPTPNGDLHLGHLAGPYLGADAYVRFQRMNGASAWHLTGSDDFQSYVVDRAR 179

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG 122
             G ++       S    +   ++DI  D +  T  +  +    +  + ++ D G I   
Sbjct: 180 REGRSSAEVAAHYSAEIAETLRLMDIPLDQYTVTNADPGYVPALKDFFTRLVDAGAIAPA 239

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR-------------- 168
                +  R   Y  + +V+ G  G       N  +   E                    
Sbjct: 240 DGPALFDPRTGQYLYEVDVHGGCPGCGEATAGNICELCGEPNTVVDLAGPVAGPSGETPV 299

Query: 169 -------LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  +    +   +  +      +P   R       + G  D+ +S  +    I   
Sbjct: 300 TGTARRYVLPLHEHADAVLDHQRRGRVPARLRELAARLFRRGRIDIPVSHPSDWGIIPRE 359

Query: 222 DDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPAD----LHVIGKDILRFHAIYW 275
            D    +++ W +    +L          G       PAD    +H  G D   +HAI +
Sbjct: 360 ADGAGQVIWAWPEMAFGFLHGIQRFGERLGRDWTAARPADDWKVVHFFGYDNSFYHAILY 419

Query: 276 PAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           P     A       +  H   F+L+ G K S S  + +   ++++   VDA+RYFL R  
Sbjct: 420 PVLYRLALPGWTPDIDYHVNEFLLYDGLKFSTSRRHAVWGKQILDADSVDAVRYFLARNR 479

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +   +  D  +  +   L       +      +   YD ++P  G +T      L  
Sbjct: 480 PEVERTNFTLDAYEHTLTTTLIGTWQAWLHDLGQRVADRYDAVVPDAGNWTPEHAGFLGQ 539

Query: 394 CSRVLQEIRENMQ--NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  L  +  ++Q     +++A A++ +LV++  R+   ++        PD   T   + 
Sbjct: 540 LAARLGALAASLQPGGFSLNQAAAELDALVTDTVRFSRRERALAAAGGMPDEVRTTTALE 599

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +     LA      +P+ A ++ + L      R + +  + + PG  +
Sbjct: 600 LAAAWLLAHAATPVMPRFAARLAEALGQPA-PRRWPATVELVPPGSKI 646


>gi|320187432|gb|EFW62122.1| Methionyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 349

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 12/216 (5%)

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLAN 356
             G K+SKS G  I     +     D+LRY+   +++    D   + +   +RVNAD+ N
Sbjct: 1   MNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVN 60

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + NL SR+   I K +DG++    A   +D  +    +   + I E  +++   +A+ +
Sbjct: 61  KVVNLASRNAGFINKRFDGVL----ASELADPQLYKTFTDAAEVIGEAWESREFGKAVRE 116

Query: 417 VISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +++L    +RY D Q PW + K          +  + + + R L   L+  +PKL  +  
Sbjct: 117 IMALADLANRYVDEQAPWVVAKQESRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAE 176

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRF 510
             L        +  + Q L  G  ++  F  ++ R 
Sbjct: 177 AFLNTE---LTWDGIQQPLL-GHKVN-PFKALYNRI 207


>gi|94495661|ref|ZP_01302241.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425049|gb|EAT10070.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 972

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 115/326 (35%), Gaps = 45/326 (13%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP-------------- 248
           G+  +  S +    G+++  DP  ++  W  +      T G+ + P              
Sbjct: 500 GVGGMIHSNEGKLTGVELWRDPD-VLDTWFSSALWPFGTLGWPEEPTSVRPELVEGQSLS 558

Query: 249 ---------------DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
                              A+ +P DL + G DIL F    +         ++P  K   
Sbjct: 559 SENKDRASTGSGRTGQSLLARHYPNDLLISGFDILFFWDARMAMQGMEFMGDVPWRKLYL 618

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                   G+K+SKS GNV+DP+ +I+  G DALR+F+    + G+D   D+  ++    
Sbjct: 619 HGLVRAADGQKMSKSKGNVVDPLGLIDRFGADALRFFMAAMESQGRDVKMDEKRVEG--Y 676

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
            + A  + N  +R +             P A    +  I++     +Q I   M +    
Sbjct: 677 RNFATKLWN-AARFLQSNGVTASTAHEAPAATLPVNRWIIAETVATVQAIDLAMADLRFD 735

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   +   V +   D Y +  K       +  RA     V      Q+ ++L  F+P +
Sbjct: 736 AAANAIYHFVWDQFCDWYIELTKG---AMDDETRA-----VAGWAFDQILVMLHPFMPFI 787

Query: 470 ANKIFDILFVADENRCFQSLDQRLKP 495
             +++ +              Q L  
Sbjct: 788 TEELWSLTGARANELIVAQWPQALAA 813



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 22/172 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------ 59
              I           HIGHA +  + D++ R+ RL G D L+  GTD  G          
Sbjct: 36  PFTIVNPPPNVTGSLHIGHALDNTLQDIVIRYERLRGKDALWVVGTDHAGIATQMVVERQ 95

Query: 60  ---KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
              K  +    + + F+ +                R +   +D + + F  T ++     
Sbjct: 96  LNAKGEKRTDYSREDFIAKVWEWKAESGGAITRQLRRLGCSMDWANERF--TMDEGFSKA 153

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              ++ ++  +G +Y+      +     +  +D EV        +     P+
Sbjct: 154 VVKVFVELHKRGLLYRDKRLVNWDPHFRSAISDLEVETVETKGGFWRFRYPL 205


>gi|325996420|gb|ADZ51825.1| Valyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 872

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N  S  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAASY-LKLKQESFKDKERLDEYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  ---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDG 186


>gi|320161686|ref|YP_004174911.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995540|dbj|BAJ64311.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 1051

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 139/392 (35%), Gaps = 40/392 (10%)

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY---FFRLSAYQDKL 176
           Y   Y   +       Y     +     QY   ++  V+  E   +     +   + + L
Sbjct: 388 YTHTYPFCWRCSTPLLYYARPTWYIRTSQY---RNRLVELNERINWYPSHIKNGRFGNWL 444

Query: 177 LSYYESH------PEFILPIERRNEVISFVKSG------------LKDLSLSRKTFDWGI 218
            +  +            LP+            G            L  L L R   D  +
Sbjct: 445 ENNIDWALGRERYWGTPLPVWECESCHHEHMVGSVKELSEMAGRDLSGLDLHRPHVDEVV 504

Query: 219 KIPDDPQYIM-------YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
               +    M        VW D+ +  +    Y         K +PAD      D     
Sbjct: 505 LKCPECGGRMTRVPELIDVWFDSGSMPVAQWHYPFENQDIFKKQFPADFICEAVDQTRGW 564

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++++  + LL  +      +     +   G+K+SKS GN++DP +VI + G DA+R++L
Sbjct: 565 FYSLHAISTLLFDSECYKNVICLGLILDKNGQKMSKSRGNIVDPWDVIRQHGADAMRWYL 624

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---FTES 386
                 G++  +  + L   V ++    + N  S  V+    + DG  P PGA   +   
Sbjct: 625 YTATPPGQERRFSAE-LVGEVVSNFTLTLWNTYSFFVT--YANLDGWKPEPGAQVQYNSL 681

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D  +LS    +++++   ++   +  A   + + V ++ + Y    +    K  +     
Sbjct: 682 DRWLLSALHALVRDVTNALETYDVLGATRPIETFVDQLSNWYLRRSRRRFWKSGSDADKK 741

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  E +  L+ LL   +P LA +++  L
Sbjct: 742 AAYATLYEALVTLSKLLAPTMPFLAEELYQNL 773



 Score = 54.0 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG--VTTK 70
               N +P + H       DV  R+  + G  V+   G D HG  +    +        +
Sbjct: 47  PPTANGKPGVHHVLARAFKDVFPRYKTMRGYHVIRRGGWDTHGLPVEIEVEKKLGFTNKQ 106

Query: 71  VFVDQNSRNFRDMADVLDISY-DDFIR----------------TTEKRHHDTCRILWKKI 113
              D     F ++      +Y  D+ R                T    + ++   + K  
Sbjct: 107 QIEDFGIARFNELCRESAFTYIQDWERLTERIAFWVDLEKAYITYTNDYIESVWWILKNF 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+G IY+G     Y  R     +D EV  G D
Sbjct: 167 WDEGLIYRGYKVVPYCPRCGTPLSDHEVALGYD 199


>gi|291001311|ref|XP_002683222.1| predicted protein [Naegleria gruberi]
 gi|284096851|gb|EFC50478.1| predicted protein [Naegleria gruberi]
          Length = 487

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 30/267 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +  +  + I++A+ Y N  PH+G+    ++ ADV +R+ +  G + L+  GTDE+G    
Sbjct: 14  VPGQRNILITSALPYVNNYPHLGNIVGAVLSADVFSRYCKQKGYNTLYICGTDEYGTATE 73

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A     T +    +  +  + + +  DI +D F RT+ K+  +  + ++ K+   G +
Sbjct: 74  TKAFQEKTTPEAICAKYYQLHKQVYEWFDIDFDHFGRTSTKQQTEIAQDIFLKLHQNGFL 133

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWM-------- 160
            +      Y    + +  D  V            +G          NP + +        
Sbjct: 134 TEKTIEQLYDEESKTFLADRFVKGTCPTCLYEDARGDQCDKCGKLLNPTELINPRSTTTG 193

Query: 161 ------EEEGYFFRLSAYQDKLLSYYESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKT 213
                 E    F +L   Q K   +++++ +        R+   S+   GL++  ++R  
Sbjct: 194 SVPIIKETNHIFIKLQDLQHKTKEWFQNNKDTAQWTTVARSITQSWFDKGLEERCITRD- 252

Query: 214 FDWGIKIPDDP--QYIMYVWIDALTNY 238
             WG  +P +     + YVW DA   Y
Sbjct: 253 LKWGTPVPLEKFADKVFYVWFDAPIGY 279


>gi|229815148|ref|ZP_04445485.1| hypothetical protein COLINT_02194 [Collinsella intestinalis DSM
           13280]
 gi|229809378|gb|EEP45143.1| hypothetical protein COLINT_02194 [Collinsella intestinalis DSM
           13280]
          Length = 905

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 148/439 (33%), Gaps = 22/439 (5%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA---YYNDDEVYKGAD 146
            Y +F   T     +     +++      + +  +S  +  R +     +  ++ +   D
Sbjct: 310 GYGEFTGMTRDECREAVLAWFEEHDLLDHVDEHDHSVMHCYRCDQTLEPWLSEQWFVAVD 369

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                A                   Y   + +  +      L    R  V    + G +D
Sbjct: 370 KLKEPALKAVQDGRVTFHPARWTETYTTWMENLKDWCISRQLWWGHRIPVFYCEECGWED 429

Query: 207 LSLSRKTF--DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
             +   T     G       + ++  W  +      T G+  +P+  +    P    V  
Sbjct: 430 ACMDDVTVCPKCGCTHVHQDENVLDTWFSSQLWTFATQGWPQHPEQLEGHH-PTTALVTA 488

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           +DI+      +   +      +P    V     +   G ++SKS GN ++P+++I+  G 
Sbjct: 489 RDIIALWVARMVMSSLYFLDEVPFHDVVIYPTILAKDGSRMSKSKGNGVNPMDLIDMYGA 548

Query: 323 DALRYFLVREIACGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           DA+RY L+      +D  +D D       LK     + A      +  +   +L + DG 
Sbjct: 549 DAMRYNLLTLCTTNQDVKFDADIDKKTKALKGSARTEQARSFVTKIWNASRFLLMNMDGY 608

Query: 377 IP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
            P  P A T +D  + S  ++  + + E ++          V +       D Y +  K 
Sbjct: 609 TPGEPVAETAADAWMFSRLAKATRMVTEGIEKYTFGEMARGVQNFFWNEVCDWYVEVTK- 667

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
              +  +           + V+     L+   +P +   I+D +  +  +     + +R 
Sbjct: 668 --TRLKDDAACLQAQRNLIFVLDASMRLMHPLMPFVTEAIWDQMPASWLDMNEGGVIERA 725

Query: 494 KPGFMLHKTFDP-IFPRFL 511
           +   M+    +P  F RF+
Sbjct: 726 EA-LMVAAWPEPEAFERFI 743



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 18/167 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++          H+GHA +  I D + R  R+ G    +  GTD  G            +
Sbjct: 41  VTIPPPNVTGILHMGHATDDSIQDAIVRMARMRGRSTRWILGTDHAGIATQTKVDKKLKS 100

Query: 69  ----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILW 110
                              +  +      +    +  S  +D    T +  + +  R ++
Sbjct: 101 EGVSRLEIGREKFLDACWDWTHEYGGTIVEQIKRMGCSVDFDGERFTMDDEYAEAVRKVF 160

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 G IY+G     +        +DDE     +  +      P+
Sbjct: 161 CDWYHDGLIYRGKRIVNWCPDCTTAISDDEAEYKDEKGHLWHLRYPL 207


>gi|147921041|ref|YP_685149.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121685571|sp|Q0W720|SYI_UNCMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110620545|emb|CAJ35823.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 1104

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 138/389 (35%), Gaps = 70/389 (17%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ ++  + +F  +S  ++ +L+          P    +       +G +D  
Sbjct: 446 HCWRCKTPIIFLTTDQWFIAVSKMKEDMLAEV--KRVNWYPDWAGSARFYDWVNGARDWC 503

Query: 209 LSRKTFDWGIKI------------------------------------------------ 220
           +SR+   WGI I                                                
Sbjct: 504 VSRQR-YWGIPIPIWKCEKCGSLDVIGTKEELERKVGREVPDLHRPFVDEVRLECECGGS 562

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I  VW D+      T  +          +WPAD  V G D     F++      
Sbjct: 563 MRRVEDIFDVWFDSAVASWATLHFPGRK--DLMDWWPADFIVEGHDQTRGWFYSQLGAGM 620

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P          +   G+K+SKSLGNV+ P +V+E++G D LR +++ + A  +D
Sbjct: 621 VGFGKAPYNGVCMHGFTLDETGKKMSKSLGNVVAPEDVVEKLGADTLRLYVLSQNAPWED 680

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRS--VSMILKDYDGMIPT----PGAFTESDESILS 392
             +  +   +  N + A  I   V R     M+L  +D    T     G+    D  ILS
Sbjct: 681 LSFSWE---ECGNINRAINIFWNVYRFPLPYMVLDKFDPAKVTLESVKGSLRVEDRWILS 737

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD--AQKPWELKKTNPDRASTVL 448
               V++++   M    +HRA   +IS +       Y     ++ W     +PD+ +   
Sbjct: 738 KLQAVIKDVDTYMATYELHRATRSIISFILEDLSRWYVQLARERTWVEA-DDPDKLAA-Y 795

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V  + +     L+  F P +A +++  L
Sbjct: 796 RVLYDTLVTTVKLIAPFTPYIAERMYQNL 824



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           ++ +      Y   + H+G A+  II D + R+  ++G D++   G D HG  I    + 
Sbjct: 39  KRFFFVDGPPYTTGRIHLGTAWNKIIKDSVLRYRSMNGYDLIDRPGWDMHGLPIEVKVES 98

Query: 64  ----------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 K F   N          L +  ++DD   T +  + + 
Sbjct: 99  ILGFKTKKDIEEFGVARFTEECKKFAIGNMHEMTSQFKKLGVWMNWDDPYMTLKNEYIEA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+  +K  + +G  +  +  R E    D EV  
Sbjct: 159 AWWTIKQAHEKHLLERGLRNVNWCPRCETAIADSEVEY 196


>gi|134300354|ref|YP_001113850.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189082997|sp|A4J7H2|SYL_DESRM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134053054|gb|ABO51025.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 827

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ER K Y      YP+ + H+GH     I DV+ARF  + G DVL   G D  G     A
Sbjct: 30  SERPKYYCLEMFPYPSGKLHMGHVRNYSIGDVVARFKTMQGYDVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N  + R     L +SYD    + T    ++   + L+ ++  KG  
Sbjct: 90  AIKHGIAPATWTWDNIAHMRSQLKQLGLSYDWNREVATCHTEYYKWGQWLFLQLYKKGLC 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA           V+  E + +FFR++ Y  +LL+ 
Sbjct: 150 YKKHARVNWCPDCATVLANEQVVDGA----CERCSAVVEQKELDQWFFRITEYAQRLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 206 LKLLKGWPDKVKIMQENWIGRSEG 229



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 100/271 (36%), Gaps = 39/271 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAF 278
           D              Y ++       D +KA  W   D ++ G +    H +Y   +   
Sbjct: 494 DTMDTFVDSSWYYLRYTSSRDTEYAWDKNKADRWMNVDQYIGGVEHAILHLLYSRFFTKV 553

Query: 279 LLSANL----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L       + + + G +L  G K+SKS GNV+ P E+I+  G D  R F++    
Sbjct: 554 FYDLGLVNVQEPFENLLTQGMVLKDGSKMSKSKGNVVSPEEIIDRYGADTARMFILFAAP 613

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDES 389
             +D  +   G++              ++R   ++    D +   P      A+    + 
Sbjct: 614 PERDLEWSDRGVEGS---------HRFLNRVWRLVYSLKDEVAGAPAISSVNAYVGVHKE 664

Query: 390 ILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +  +    ++++ E++      + A++ ++ LV+ +  Y              D+ + V 
Sbjct: 665 MRRLTHYAIKKVTEDVSGRFNFNTAISTIMELVNGIYTY-------------RDKVAAVE 711

Query: 449 Y---VTVEVIRQLAILLQAFVPKLANKIFDI 476
               V  E +    ILL  F P +A +++  
Sbjct: 712 RDTAVLAEAVNSTIILLAPFAPHIAEELWSA 742


>gi|241668533|ref|ZP_04756111.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877068|ref|ZP_05249778.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843089|gb|EET21503.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 813

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     A
Sbjct: 29  KNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A     +   +   N    R   D L  S+D    + T ++ ++   +  + ++  +G  
Sbjct: 89  AIKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREVATCDEDYYKWEQWFFIQLYKEGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            ++  E   +F +++ Y D+LL  
Sbjct: 149 YRKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALIEKKEIPQWFLKITDYADELLKD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   ++           GL
Sbjct: 205 INQLDGWPEAVKTMQTNWIGKSKGL 229



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 113/351 (32%), Gaps = 43/351 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
              G   Q Y     P+    + G            L    +  E   P++   E ++  
Sbjct: 418 HDWGISRQRYWGCPIPMIHCNDCGLVPEKEENLPVKLPTNVTLTEAGSPLKDMPEFLNVA 477

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PA 258
                           G     +       + ++   Y   T    +   S+   +  P 
Sbjct: 478 CPN------------CGKPATRETD-TFDTFFESSWYYARYTCPTADKMLSEEANYWLPV 524

Query: 259 DLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D ++ G +    H +Y            L  +    K + + G +L  G K+SKS GN +
Sbjct: 525 DKYIGGIEHAIMHLLYARFFHKLMRDQGLVTSDEPFKNLLTQGMVLKDGAKMSKSKGNTV 584

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+I++ G D +R F +      +   +   G+           + N    +  ++ K
Sbjct: 585 DPQELIDKYGADTVRLFSMFAAPPEQSLEWSDTGVDGA--NKFLRKVYNYAYTNKEILAK 642

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           +           +++D+         L++   +      +  ++  + +++ ++ Y +  
Sbjct: 643 NITI---DVTKLSKNDKKARYEIYANLKQAIFDFDKSQFNTVVSACMKILNTLNNYDNLS 699

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                             V +E    L  +L  F P + + ++  + + ++
Sbjct: 700 ----------------DSVKLEGFSILLRILSPFTPHICHYLWQEIGLGED 734


>gi|120613181|ref|YP_972859.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166230603|sp|A1TVU7|SYL_ACIAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120591645|gb|ABM35085.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 897

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 6/219 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA
Sbjct: 31  GKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSREVATCDPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLKITDYAQELLDHV 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +            ++V    ++ +      R  F   I+
Sbjct: 207 QVGNPNATLTGWPDKVRLMQENWIGKSEGVRFAFTHDIR 245



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 71/530 (13%), Positives = 145/530 (27%), Gaps = 111/530 (20%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFV---------D 74
           H       +V    + L G       G   H ++    A   G+  K  V          
Sbjct: 325 HPLTDEPIEVWVGNYVLMGYGDGAVMGVPAHDERDFAFALKYGIEIKQVVLVDGETFDYH 384

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
           +    + D  + + I+ D+F   +   + +    +   + +KG   K             
Sbjct: 385 RWQDWYGDKQNGVTINSDNF---SGLSYQEAVSAVAHALQEKGLGEKKT----------- 430

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
                    G   Q Y     P+   +E G           +L           P+ +  
Sbjct: 431 --TWRLRDWGVSRQRYWGTPIPIIHCDEHGAVPVPEKDLPVVLPQDCIPDGSGNPLHKHE 488

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              + VK  +   +  R+T         D              Y           G    
Sbjct: 489 GFHAGVKCPVCGKAARRET---------DTMDTFVDSSWYFMRYCDPKNADAMVAGGADY 539

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPK-----KVFSHGF--ILHK 299
           + P D ++ G +    H +Y   +            + P  K      V +H +     K
Sbjct: 540 WMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKVDEPFTKLLTQGMVLNHIYSRRTDK 599

Query: 300 GEK-------------------------------------------ISKSLGNVIDPIEV 316
           G K                                           +SKS  N +DP E+
Sbjct: 600 GGKEYFWPHDVEHIQDEAGKITGARLKNAVGDLPAGTPIDYEGVGTMSKSKNNGVDPQEL 659

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G D  R + +          ++   ++          + N   +   +     +  
Sbjct: 660 IEKYGADTARLYTMFTAPPEATLEWNDAAVEGSYR--FLRRVWNFGVKLAGIDAAATEAA 717

Query: 377 IPTPGAFTESD-----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           I    +  +       +++      VL+++  + Q    +  ++  + +++ ++ +  A 
Sbjct: 718 IQGAQSLQDVQFGKEAKALRLEIHTVLKQVDYDYQRMQYNTVVSGAMKMLNALEDFKSAD 777

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            P  L               +E    L  +L    P +A+ ++  L  A 
Sbjct: 778 APGGLV------------ALIEGFGILLRVLYPATPHIAHGLWSGLGYAG 815


>gi|19553575|ref|NP_601577.1| valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391219|ref|YP_226621.1| valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|90103533|sp|Q8NN37|SYV_CORGL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41326559|emb|CAF21041.1| PUTATIVE VALINE-TRNA LIGASE [Corynebacterium glutamicum ATCC 13032]
          Length = 903

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 119/361 (32%), Gaps = 47/361 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++                 I P         +V   + D ++SR+   W
Sbjct: 372 IEPRLSLQWFVKVEELAKMSGDAVREGDTTIHPKSLEPRYFDWVD-NMHDWTISRQ-LWW 429

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +       K
Sbjct: 430 GHRIPIWYGPNDEIICVGPDEQAPEGYVQDPDVLDTWFSSALWPFSTMGWPEKTP-ELEK 488

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 489 FYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGKDGRPQVPFTDLFLHGLVRDE 548

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N   A  +
Sbjct: 549 HGRKMSKSLGNGIDPMDWVENYGADALRFTLARGANPGVDLPVGEDSAQSSRN--FATKL 606

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N    ++  +       +P     T++D  I+ +  +V  ++   + N    +A  ++ 
Sbjct: 607 FNATKFAL--MNGAVSEGLPAREELTDADRWIVDLLEQVRLDVDAYLDNYQFAKANEELY 664

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    ++    +      V   V+  L  LL   +P +   ++  
Sbjct: 665 HFAWNEFCDWYLEIAKVQIPREGTSAQGENTQKVLGHVLDALLRLLHPAMPFVTEVLWQA 724

Query: 477 L 477
           L
Sbjct: 725 L 725



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 49  SDKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTK 108

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     + +  +     R + D +D S + F  T + 
Sbjct: 109 VEEMLKETEGKTRYDYDREEFIAKVWEWKQEYGGKIGEQMRAIGDSVDWSRERF--TLDD 166

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 167 GLSRAVQTIFKKLFDAGLIYQANRLVNWSPVLETAVSDIEVIY 209


>gi|261839881|gb|ACX99646.1| valyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 872

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 135/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLAQFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKGKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|239993535|ref|ZP_04714059.1| valyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 924

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 127/394 (32%), Gaps = 81/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  + +     +   ES     +P    N+        ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVAVESLAKPAIEAVESGEIRFVPENW-NKTYYQWMHNIQDWCISRQ-LWW 405

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 406 GHRIPAWYDENGNVFVGRTEEEVREKHGLGSDVTLSQDDDVLDTWFSSALWPFATMGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P+ + V G DI+ F    +       +  +P      +       G+K+S
Sbjct: 466 ETPDLETFV-PSSVLVTGFDIIFFWVARMIMMTKKFTGKIPFKDIYITGLIRDENGDKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGIDIESLVTKRTAGMMQPQLAEKIAKRTRKQFPDGIQAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTES 386
                 +  +D  +D   ++     +  N I N  SR V M  +++D          + +
Sbjct: 585 TFAAMASTSRDINFDMARVEG--YRNFCNKIWN-ASRFVLMNTEEHDTGRDGGEMVLSMA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP--WELKKTNPD 442
           D  I +   + L E  + +++     A   V         D Y +  KP       T  +
Sbjct: 642 DRWIWAKFQQTLIEFEKALEDYRFDIAAQTVYEFTWNQFCDWYLELTKPVLNNDASTEAE 701

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  T  +  + V+  L  LL   +P + + I+  
Sbjct: 702 KRGT-RHTLINVLESLLRLLHPLMPFITDTIWQR 734



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GH ++  I D L R+HR+ G + L+  GTD  G       + 
Sbjct: 31  DPYCILLPPPNVTGSLHMGHGFQQTIMDALTRYHRMKGDNTLWQVGTDHAGIATQMVVER 90

Query: 65  AGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                         + F+ +                R +    D S + F  T ++    
Sbjct: 91  QLNAEGKTRHDLGREDFIKKVWEWKEHSGGTITGQMRRLGTSPDWSREVF--TMDEDLSK 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ K+ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 149 AVTEVFVKLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLNEEEDGHMWHMRYPL 201


>gi|94500493|ref|ZP_01307024.1| valyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427283|gb|EAT12262.1| valyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 953

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 135/405 (33%), Gaps = 90/405 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R+ +     +   E      +P    N   S+++  L+D  +SR+   W
Sbjct: 371 IEPMLTDQWYVRVESLAKPAIEAVEKGDIEFVPKSYENMYFSWMRD-LQDWCISRQ-LWW 428

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDEQGNAYVGRSEAEVRKDNNLGDDIKLSQDEDVLDTWFSSALWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                K    P D+ V G DI+ F    +       +  +P             +G+K+S
Sbjct: 489 ETPELKTFH-PTDVLVTGFDIIFFWVARMIMMTLKFTGEVPFKTVYVHGLVRDQEGQKMS 547

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DALR+
Sbjct: 548 KSKGNVLDPLDIIDGIELESLVEKRTSGMMQPQMAAKIEKQTRKHFPDGIAAYGTDALRF 607

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD----------YDGMI 377
             +   + G+D  +D   L+     +  N + N  +R V M ++            D + 
Sbjct: 608 TFLSLASTGRDIKFDMSRLEG--YRNFCNKLWN-ATRYVLMNVEQEEGIALTAQQIDDLN 664

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-- 433
                 + +D  I+S      + + + +       A   +   V     D Y +  KP  
Sbjct: 665 NGDVELSLADRWIISRLQLAEKTVVDALDGYRFDHAAQAIYEFVWNEYCDWYLELSKPVL 724

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           W+   ++  +  T     V V+  +  +    +P +  +I+  + 
Sbjct: 725 WDDNASDAQKRGT-RRTLVNVLEAILRMSHPMMPYITEEIWQTIG 768



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
              I  PN     H+GH +   + D + R++R+ G + L+  GTD  G            
Sbjct: 34  CIMIPPPNVTGSLHMGHGFNNAVMDCMVRYNRMKGKNTLWQPGTDHAGIATQMVVERQLA 93

Query: 60  ------KAAQNAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                 KA        KV+  +       ++  R +   +D S + F  T +    +  +
Sbjct: 94  AQGQDRKALGREKFLEKVWEWKDHSGGTITQQIRRLGSSVDWSRERF--TMDDGLSNAVQ 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++  +  IY+G     +  +     +D EV       +      P+
Sbjct: 152 EVFVRLYKEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 201


>gi|331001667|ref|ZP_08325190.1| isoleucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330413388|gb|EGG92755.1| isoleucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 1037

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/456 (13%), Positives = 138/456 (30%), Gaps = 14/456 (3%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    D  G               VFV    +      D     +D  +     
Sbjct: 330 RNYDLPFVQLVDAQG-----NLTKETKWEGVFVKDADKLVLKDLDENGKLFDAPVFEHSY 384

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            H   C       + +    K        +R+    N      G  G++ +   N   W 
Sbjct: 385 PHCWRCNTPLIYYARESWYIKMTAVKEDIIRNNNTINWIPESIG-KGRFGDWLENIQDWA 443

Query: 161 EEEGYFFRLSAYQDKLLSYYES--HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                ++            +         L    +N   +          ++    + G 
Sbjct: 444 VSRNRYWGTPLNVWICECGHMHSIGSVEELKSMSKNCPDNIELHRPYIDEVTITCPECGK 503

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++   P+ ++  W D+ +       Y           +PAD      D     F+++   
Sbjct: 504 EMRRTPE-VLDAWFDSGSMPFAQHHYPFENHEKFEAQFPADFISEAVDQTRGWFYSLLAI 562

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + L+    P    +         G+K+SKS GN +DP++ + + G DA+R++     A  
Sbjct: 563 STLIFNKAPYKNVIVMGHVQDEDGQKMSKSKGNAVDPMDALNKFGADAIRWYFYVNSAPW 622

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVC 394
               +    +++     L           +   + ++D           +  D+ +LS  
Sbjct: 623 LPNRFHDKAVEEGQRKFLGTLWNTYAFYVLYADIDNFDPTKYSLDYDKLSVMDKWLLSKL 682

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + +++ + E + N  I      + S   ++ + Y    +     K               
Sbjct: 683 NTLVKTVDEYLSNYKITETARALQSFTDDMSNWYVRRCRERFWAKGMEQDKINAYMTLYT 742

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+ +    +P +  +I+  L  + +    +S+
Sbjct: 743 ALITLSKIAAPMIPFMTEEIYQNLVRSVDKNAPESI 778



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGHA   +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KDAPTYMFYDGPPTANGKPHIGHALTRVIKDMIPRYRTMKGYKVPRKAGWDTHGLPVEIE 95

Query: 62  AQNA-----------------GVTTKVFVDQ---NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                       K  V +       F D+        D ++   +  
Sbjct: 96  VEKELGINGKEQIEGYGVAPFIEKCKESVWKYKGMWEEFSDVIGFWADMNDPYVTYHDSY 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++     K+I DKG +YKG     Y  R     +  EV +G  
Sbjct: 156 I-ESEWWALKQIWDKGLLYKGFKVVPYCPRCGTPLSSHEVAQGYK 199


>gi|145219290|ref|YP_001129999.1| isoleucyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205454|gb|ABP36497.1| Isoleucyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 1088

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 11/270 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G+     P+ ++ VW D+ +       Y         + +PAD    G D     F+ ++
Sbjct: 544 GVCFRRTPE-LIDVWFDSGSMPFAQLHYPFENKELFHRTFPADFIAEGVDQTRGWFYTLH 602

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A LL         V +   +   G+K+SKS GNV+DP E +E  G DA+R++L+    
Sbjct: 603 AVASLLFDTAAYRNLVVNGHILDKNGQKMSKSKGNVVDPFETMERYGADAIRWYLMVASP 662

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILS 392
             +   ++ D +++         I +     +   +  + G+ P    G  +  D  +LS
Sbjct: 663 PWRPKSFNTDEIEEEQRKFFRAYINSYNFFVLYANVDGFTGLEPEVELGERSGLDRWVLS 722

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVL 448
             + ++  +  +M+   +  A   +   +     + Y     ++ W+      D+ +   
Sbjct: 723 SLNTLVGSVHLSMERYDLTGAARLINDFIVDDLSNWYIRRSRKRFWK-SDMGADKLAA-Y 780

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 +  LA LL  F P LA +++  L 
Sbjct: 781 QSLFSCLETLAKLLAPFTPFLAERLYLNLN 810



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-----NAGV 67
               N +P + H +   I D + R+  + G  V    G D HG  +  + +         
Sbjct: 55  PPTVNGKPGVHHVFSRTIKDAVCRYRTMQGYRVPRKAGWDTHGLPVEISVEKKLGLKNKA 114

Query: 68  TTKVF----------------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
             + +                +D N   +  + + +   +  D    T E  + ++    
Sbjct: 115 QVEEYGEELFNTEARSLVYHHIDDNREGWGKLTERMGYWVDMDHPYITCENNYIESVWWA 174

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 175 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 211


>gi|222444486|ref|ZP_03607001.1| hypothetical protein METSMIALI_00097 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434051|gb|EEE41216.1| hypothetical protein METSMIALI_00097 [Methanobrevibacter smithii
           DSM 2375]
          Length = 905

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 120/355 (33%), Gaps = 21/355 (5%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS-- 210
           + N V    +        + +       +      +P+    +    +   ++DL +   
Sbjct: 394 EMNWVPEHMKSRMINWADSMEWDWCISRQRLFATPIPVWFCKDCGKVMLPDVEDLPVDPT 453

Query: 211 ----RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
               +K    G +     + ++  W+D+  + L+  G+ +         +PA++   G D
Sbjct: 454 HDKPKKACSCGCEEFIGEEDVLDTWMDSSISPLSIAGWPNEGY---ENNFPANIRPQGHD 510

Query: 267 ILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+R  A Y       L+   P    V +       G K+SKS GNVI P EVIE+ G DA
Sbjct: 511 IIRTWAFYTTLRCLALTGKKPFDDIVINGMVFGEDGYKMSKSRGNVIAPDEVIEQYGADA 570

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR +       G D  +D   +K            N        I  +          F 
Sbjct: 571 LRTW-AANSVPGSDVIFDWKDIK--HGYRFLRKFWNAFRFISMQIFDEEVSYDEIKDNFD 627

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN-- 440
             D  ILS  + + + +     N      +  +   +     D Y +A K + L   +  
Sbjct: 628 PLDLWILSKLNNLNKVVDNAFANYDFATTITSIEKFIWHDFCDEYIEAVK-YRLYNDDVS 686

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
                   Y    VI     LL   VP  A +++      +      +  +++ L
Sbjct: 687 DSSRKAAKYTLRNVIETSLKLLSPIVPFFAEEVYQYFGDGESIHKTSWPEVNEDL 741



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 58/159 (36%), Gaps = 15/159 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  I T   YP    H+GH    +  D+ AR+ RL GLDVLFT G D HG       
Sbjct: 35  TKPRYIIDTPPPYPTGSIHLGHVLNWVYIDMNARYRRLKGLDVLFTQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                 QN    +D    L  S D      T    +    +
Sbjct: 95  EETHGIKKNDVSRAKFREYCIELTTQNIAKMKDQMQALGFSQDWSREFITMTPEYMKRTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             + K+ D+G IY+G +   +  R E      EV    +
Sbjct: 155 YSFLKMYDEGLIYQGIHPVNWCPRCETAIAFAEVEYSDN 193


>gi|212696395|ref|ZP_03304523.1| hypothetical protein ANHYDRO_00932 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676673|gb|EEB36280.1| hypothetical protein ANHYDRO_00932 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 1076

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/458 (15%), Positives = 157/458 (34%), Gaps = 31/458 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +      ++ F    D  G              K   D N   F  + D   +    + +
Sbjct: 371 YQLGRKYNLPFVQPVDLEG-----CFTETPWKGKFIFDTNEEIFLHLRDEGKV----YKK 421

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            T + ++  C      +          Y     L ++   N++ V             N 
Sbjct: 422 QTIEHNYPHCWRCKTPL--VYYAKPSWYIEMSKLSEKMVENNNGVNWYPQTIGDKRFGNW 479

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +++              L   +          R+      ++   +D+ L R   D 
Sbjct: 480 LENVKDWAISRSRYWGTPLNLWRCDDCGHVESIGSRKELAEKAIEDISEDIELHRPYVDD 539

Query: 217 GIKIPDDPQYIMY-------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                 +   +M+       VW D+     +   Y          ++PAD    G D   
Sbjct: 540 VTITCPECGKVMHRVPDVIDVWFDSGAMPFSQVHYPFAKGEDFENYFPADFICEGIDQTR 599

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + +++   P    + +   +   G+K+SKS GN ++P E+ ++ G DA+R+
Sbjct: 600 GWFYSLMAISTIITGKAPYKNVLVNDLVVDKNGQKMSKSKGNTLNPFELFDKYGADAVRF 659

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY----DGMIPTPGAF 383
           + +    C     +D+ GL +  N +    I N+ +        D     +         
Sbjct: 660 YSLYVSPCWVPTKFDEKGLIEVKN-NFFRTIENVYNFFALYANTDNIEIDEIRNFENVEL 718

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT 439
            E D+ + S  + +L+   E M++   ++ +  V   V     + Y   + ++ W    T
Sbjct: 719 EEIDKWLYSKLNSLLKAYYEQMESFDYNKVVHLVNDFVVEDLSNWYIRRNRKRFWSQDLT 778

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +A  V     +V+  L+ ++    P ++ +I+  L
Sbjct: 779 ESKKA--VYKTCYDVLLSLSKMIAPIAPFISEEIYRNL 814



 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 59/165 (35%), Gaps = 19/165 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E+  I       N +P I H     + D+ +R+  + G  VL   G D HG  +   
Sbjct: 77  EDAEEYIIFDGPPTANGKPGIHHVIARTLKDMTSRYKNMKGYKVLKKAGWDTHGLPVEIE 136

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRH 102
            +                       K  V + S  +RDM+D +   Y  D+   T +  +
Sbjct: 137 VEKELGFSEKDQIEEYGVEKFNQKCKDSVFKYSDMWRDMSDRMAFLYDMDNPYITLDNDY 196

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +T   L  +   KG IY+G     Y  R        EV +G   
Sbjct: 197 IETEWWLLNQAFKKGLIYEGAKVMPYCPRCGTGLASHEVAQGYQM 241


>gi|299536132|ref|ZP_07049446.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728407|gb|EFI68968.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 924

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 137/387 (35%), Gaps = 23/387 (5%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEE 162
             W+  S         +    S   E    +++          DG++ N   N V W   
Sbjct: 385 HCWRCDSPLLYYATDSWFIKMSALKEQLLQNNQQVTWYPSHIKDGRFGNFLENLVDWNIS 444

Query: 163 EGYFFRLSAYQDKLLSYYESHPE------FILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
              ++                          L     NE +   K  + D+  +      
Sbjct: 445 RNRYWGTPLNVWICQDCNHEEAPNSVAALQQLAKGAVNEQLELHKPFIDDIVCTCPVCQG 504

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYW 275
            +K   +   ++ VW D+ +       Y      +    +PAD+ + G D  R F     
Sbjct: 505 NMKRTPE---VIDVWFDSGSMPFAQQHYPFEDVANFHHQFPADVVIEGIDQTRGFFYSLL 561

Query: 276 PAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L    P  K V S G +L + G+K+SKS GN ++P+E+IEE G DALR+  + + +
Sbjct: 562 AVSTLFTGKPPYKNVLSLGHVLDEHGQKMSKSKGNALEPVELIEEYGADALRWAFLVDSS 621

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSV 393
                 + K  +     + L + + N      +   + ++       G  ++ D  ILS 
Sbjct: 622 PWNPKRFSKKVVLDAK-SKLVDTLDNTFKFYDMYAQIDNFTYDATNTGTRSQLDHWILSR 680

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYV 450
               +  +  +M +    +A  ++  LV E+ + Y      + W    T   R +     
Sbjct: 681 LHHTILLVTTSMDDYQFTQATREIGQLVEELSNWYIRRSRARFWANGMTADKRGA--FST 738

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             E +  +  L+  F P +A  I+  L
Sbjct: 739 LYEALTSICQLIAPFTPFIAEDIYHQL 765



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 2/149 (1%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++           N  PH+GHA+   I DV+AR+  + G  V    G D HG  +    
Sbjct: 36  EQQPFVFYEGPPTANGLPHVGHAFGRTIKDVVARYKTMQGYLVERKAGWDTHGLPVELGV 95

Query: 63  QNA--GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           + A      +   +     F         +Y+   RT  ++      +    ++   D  
Sbjct: 96  EKALGISGKQEIENYGVEQFIQACKKSVFTYEQKWRTFTEQLGYWLDMDDPYLTLSNDYI 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           +  +     +  E                
Sbjct: 156 ESVWHILSHVHKEKLLYKGHRVSPYCPSC 184


>gi|21325147|dbj|BAB99769.1| Valyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 900

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 119/361 (32%), Gaps = 47/361 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++                 I P         +V   + D ++SR+   W
Sbjct: 369 IEPRLSLQWFVKVEELAKMSGDAVREGDTTIHPKSLEPRYFDWVD-NMHDWTISRQ-LWW 426

Query: 217 G--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           G  I I   P                      ++  W  +     +T G+ +       K
Sbjct: 427 GHRIPIWYGPNDEIICVGPDEQAPEGYVQDPDVLDTWFSSALWPFSTMGWPEKTP-ELEK 485

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSHGFILH 298
           F+P  + V   DIL F       F   A                 +P             
Sbjct: 486 FYPTSVLVTAYDILFFWVARMMMFGTFAAKETPELLGEGKDGRPQVPFTDLFLHGLVRDE 545

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N   A  +
Sbjct: 546 HGRKMSKSLGNGIDPMDWVENYGADALRFTLARGANPGVDLPVGEDSAQSSRN--FATKL 603

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N    ++  +       +P     T++D  I+ +  +V  ++   + N    +A  ++ 
Sbjct: 604 FNATKFAL--MNGAVSEGLPAREELTDADRWIVDLLEQVRLDVDAYLDNYQFAKANEELY 661

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   D Y +  K    ++    +      V   V+  L  LL   +P +   ++  
Sbjct: 662 HFAWNEFCDWYLEIAKVQIPREGTSAQGENTQKVLGHVLDALLRLLHPAMPFVTEVLWQA 721

Query: 477 L 477
           L
Sbjct: 722 L 722



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         Q H+GHA +  + D LAR  R+ G +VL+  G D  G      
Sbjct: 46  SDKPGFSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTK 105

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     T                     + +  +     R + D +D S + F  T + 
Sbjct: 106 VEEMLKETEGKTRYDYDREEFIAKVWEWKQEYGGKIGEQMRAIGDSVDWSRERF--TLDD 163

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++KK+ D G IY+      +S   E   +D EV  
Sbjct: 164 GLSRAVQTIFKKLFDAGLIYQANRLVNWSPVLETAVSDIEVIY 206


>gi|297182280|gb|ADI18449.1| valyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF4000_13G19]
          Length = 928

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 131/394 (33%), Gaps = 82/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  + +     +   E+     +P    N   S+++  L+D  +SR+   W
Sbjct: 348 IEPYLTDQWFVAVESLAKPAIEAVENGDIQFVPKNYENMYFSWMRD-LQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQYIMYV---------------------------WIDALTNYLTTTGYLDN 247
           G  I    D    +YV                           W  +     +T G+ + 
Sbjct: 406 GHRIPAWYDEDGNVYVGRDEDEVRREHNLGDRPLSQDEDVLDTWFSSALWTFSTLGWPEQ 465

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +  K    P D+ V G DI+ F    +       +  +P  +          +G+K+SK
Sbjct: 466 TEELKTFH-PTDVLVTGFDIIFFWVARMIMMTLKFTGQVPFKQVYVHGLVRDAEGQKMSK 524

Query: 306 SLGNVIDPIEVIEE-------------------------------------VGVDALRYF 328
           S GNV+DP+++I+                                       G DALR+ 
Sbjct: 525 SKGNVLDPLDLIDGIDLDTLVDKRTRGLMQPQKEKQIGKRTRKEFPDGINAYGTDALRFT 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTE 385
            +   + G+D  +D   ++     +  N I N  +R V M  ++ D  +         + 
Sbjct: 585 FLSLASTGRDIKWDMGRIEG--YRNFCNKIWN-AARYVLMNTENQDCGLDADSGEVTLSL 641

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--P 441
           +D  I+S   R   E+ E +       A       +     D Y +  KP  L       
Sbjct: 642 ADRWIVSALQRAETEVTEALDQFRFDVASHAAYEFIWNEYCDWYLELSKP-VLYGDEYSE 700

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                     V V+  +  L   F+P +  +I+ 
Sbjct: 701 AEKRGTRRTLVRVLEAILRLAHPFMPFITEEIWQ 734



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 24/168 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ------ 63
            I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTDHAGIATQMVVERRLAAE 95

Query: 64  --------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         KV+  +       ++  R M   +D S + F  T +    +  R +
Sbjct: 96  GTDRHELGRERFLDKVWEWKAESGGTITQQLRRMGSSVDWSRERF--TMDDGLSNAVREV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++  +G IY+G     +        +D EV    +  +      P+
Sbjct: 154 FVRLHSEGLIYRGKRLVNWDPALHTAISDLEVENREEQGHMWHFRYPL 201


>gi|95930682|ref|ZP_01313416.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133334|gb|EAT14999.1| leucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 850

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 7/242 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++EK Y+     YP+ + H+GH     I DV+ARF RL G +VL   G D  G     A
Sbjct: 30  SDKEKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFKRLQGYNVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N  N R     + +SY  D    T +  ++   ++++ K+ +KG  
Sbjct: 90  AIQHGIHPAKWTVENIANMRLQLKRMGLSYDWDREFATCDVDYYKWEQLIFLKMFEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +    +    +++V   A           V+  E + +FF+++ Y  +LL  
Sbjct: 150 YKKSSSVNWCPTCQTVLANEQVEDDA----CWRCGTVVEDKELDQWFFKITNYAQELLDE 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +    +   +           +G  +++   +     IK+    Q  +Y          
Sbjct: 206 IDKMAGWPDSVLTMQRNWIGRSTG-CEVAFPLENTLDKIKVFTTRQDTLYGATFMSLAPE 264

Query: 240 TT 241
             
Sbjct: 265 HP 266



 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 120/383 (31%), Gaps = 71/383 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + ++ G           +L               +++    V  
Sbjct: 423 WGVSRQRYWGTPIPIIYCDQCGVVPVPEKDLPVVLPTDVEFTGEGGSPLAKHKEFYTVSC 482

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                   R+T  +   +     +  Y   D  +  +                 P D ++
Sbjct: 483 PQCGEVARRETDTFDTFVESSWYFARYACPDFASGPIDRAAAEYWL--------PVDQYI 534

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPL----------------PKKVFSHGFILH 298
            G +    H +Y   F         +  + P                 P+  + +   + 
Sbjct: 535 GGVEHAVMHLLYARFFTKVMRDLGLMDVDEPFTNLLTQGMVCKETQSCPEHGWLYPEQVE 594

Query: 299 KGE--------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            G+              K+SKS  NV+DP ++I   G D  R F +      KD  ++  
Sbjct: 595 NGKCTQCGKPVTIGRTEKMSKSKMNVVDPDKLIATYGADTARLFSLFAAPPEKDLEWNDQ 654

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRE 403
            ++         G    ++R    +  + D +       TE D +++  +  R ++++ E
Sbjct: 655 SVE---------GCYRFLNRVWRAVYDNQDILKNAAAPETEGDAKALRRMTHRTIKKVTE 705

Query: 404 NMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++      + A+A V+ LV+ +  +              ++ +       E +     LL
Sbjct: 706 DIDGRFHFNTAIAAVMELVNAIYGF--------------EKKAEYPGAVKEALEAAVRLL 751

Query: 463 QAFVPKLANKIFDILFVADENRC 485
             FVP +  +++  L   ++   
Sbjct: 752 APFVPHVTEELWANLGHEEDLET 774


>gi|156934838|ref|YP_001438754.1| leucyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166231605|sp|A7MQS0|SYL_ENTS8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156533092|gb|ABU77918.1| hypothetical protein ESA_02686 [Cronobacter sakazakii ATCC BAA-894]
          Length = 860

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNINYMKNQLKMLGFGYDWSRELATCTPEYYRWEQQFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 104/321 (32%), Gaps = 77/321 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T           K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYKEGMLDEKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGANGERNWVSPKDAIVERDEKGRIVKASDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP E++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQEMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V R V       D       A  +  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWRLVYEHTSLGDAPALNVDALNDDQKALRRDVHKTIAKVSDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P ++ 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALMREALLAVVRMLNPFTPHVSF 770

Query: 472 KIFDILFVAD--ENRCFQSLD 490
            ++  L      +N  +   D
Sbjct: 771 TLWQELKGEGDIDNAPWPQAD 791


>gi|315127065|ref|YP_004069068.1| leucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015579|gb|ADT68917.1| leucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 862

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R+    L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRNQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y  +LL  
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEQKEIPQWFIKITDYAQELLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +   ++   ++           GL
Sbjct: 206 LDKLEDWPEQVKTMQRNWIGRSEGL 230



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 27/189 (14%)

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N IDP EVI + G D +R F++      +   +   G++         G    + R   
Sbjct: 628 NNGIDPQEVIAQYGADTVRLFMMFTAPPEQTLEWSDSGVE---------GAHRFLKRVWK 678

Query: 368 MI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
               +K          A T   + +     + + ++ ++++ +   + A+A ++ L +  
Sbjct: 679 YAVDVKTVGYQALDKSALTNPQKVLRRELHKAIAKVSDDVERRQTFNTAIAAIMELSN-- 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
                     +L K        V  +  E +  L I+L    P L+++++  L    +  
Sbjct: 737 ----------KLLKAPLSDTQDV-AIANEALEALIIMLAPITPHLSHQLWQDLGKGGDIL 785

Query: 483 NRCFQSLDQ 491
           +  +  +D+
Sbjct: 786 DAAWPKVDE 794


>gi|307637822|gb|ADN80272.1| Valyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325998009|gb|ADZ50217.1| Valyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 872

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N  S  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNAASY-LKLKQESFKDKERLDEYQTPLGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  ---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREEFIQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  ++G I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEQGLIVQDNYMVNWCTKDG 186


>gi|91776507|ref|YP_546263.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254071|sp|Q1GZB5|SYL_METFK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91710494|gb|ABE50422.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 817

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  +   YP+ + H+GH     I DVL+RFHR+ G +V+   G D  G     
Sbjct: 29  VSDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHRMRGYNVMQPMGWDAFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N  + +     L ++ D    I T +  ++   + L+ ++  KG 
Sbjct: 89  AAIKHNVAPAGWTYSNIEHMKGQLKSLGLAVDWQREIATCKPDYYRWEQWLFTELYKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK   +  +   D+    +++V  G            V+  +   YF +++AY ++LL+
Sbjct: 149 IYKKTATVNWDPVDQTVLANEQVIDG----RGWRSGALVEKRDIPQYFMKITAYAEELLA 204

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             +    +   ++           G
Sbjct: 205 DLDKLDGWPEQVKTMQRNWIGKSYG 229



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 96/248 (38%), Gaps = 30/248 (12%)

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGF 295
             +    +A +W P D ++ G +    H +Y   F            + P  K + + G 
Sbjct: 511 HSSMVDERANYWLPVDQYIGGIEHAILHLLYARFFNKLMRDVGLVRHDEPFTK-LLTQGM 569

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L  G K+SKS GN +DP E+I+  G D  R F++      +   +   G++      L 
Sbjct: 570 VLKDGSKMSKSKGNTVDPQELIDNYGADTARLFMMFAAPPEQSLEWSDAGVEGAH-RFLK 628

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
                + +   S I+  +       G  +   ++      + ++++ ++   +   + A+
Sbjct: 629 RVWTAVANHVESGIVAAFTM-----GDLSAELKAFRRQLHQTIEKVTDDYGRRHAFNTAI 683

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L   ++ Y          K     A T   +  E +  + +LL   VP + + ++
Sbjct: 684 AAVMEL---MNAY---------AKIEGHDA-TTRAIRQEALENIILLLSPIVPHICHALW 730

Query: 475 DILFVADE 482
             L    +
Sbjct: 731 QALRPGTQ 738


>gi|313894560|ref|ZP_07828124.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440956|gb|EFR59384.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 822

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ESKEKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKKMKGFNVLHPMGWDSFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N  N +     L +SY  D  + T ++ ++   +  +++   KG  
Sbjct: 90  AIKHGIAPKTWTLDNIENMKLQQKALGLSYDWDREVATCKEDYYKWTQWFFQQFYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  GA         N V+  +   +F R++ Y D+LL+ 
Sbjct: 150 YKKEAKVNWCETCHTVLANEQVIDGA----CWRCDNTVEKKDLSQWFLRITEYADRLLTD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDHWPQRVKLMQKNWIGRSEG 229



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 42/306 (13%)

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDN 247
           R  E + F    +  L+ S             P +     M  +ID+   +L  T   ++
Sbjct: 457 RLPEDVKFESGAVSPLATSESFLHTTCPKCGGPAHRETDTMDTFIDSSWYFLRYTDAKND 516

Query: 248 PDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGF 295
                 K    +   D ++ G +    H +Y   F+        + AN P    + + G 
Sbjct: 517 QAPFDKKIANYWMNVDQYIGGIEHAILHLLYSRFFVKVIHDLGLIEANEPFRG-LLTQGM 575

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +L +G K+SKS GNV+ P E+I   G D  R F++      +D  +   G++        
Sbjct: 576 VLKEGSKMSKSKGNVVSPEEIINTYGADTARLFILFAAPVDRDLDWSDQGVEGS------ 629

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRA 413
                 + R   ++    +       G  T+ +  +     RV++++ E++  N   + A
Sbjct: 630 ---YRFLGRVWRIVDAYNEEGKKNVTGELTKDEFVLRRELHRVIKKVTEDLDNNFNFNTA 686

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANK 472
           ++ ++ LV+ +               + D+A T+      E+ R L +LL  FVP +  +
Sbjct: 687 ISAIMELVNAMY-------------AHKDKADTINSALANELTRSLLLLLAPFVPHITEE 733

Query: 473 IFDILF 478
           ++  L 
Sbjct: 734 LWHELG 739


>gi|124514188|gb|EAY55703.1| Valyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 904

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 134/377 (35%), Gaps = 45/377 (11%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++      +F R+       +           P   +N    +++  ++D  +
Sbjct: 360 CYRCQTVIEPALSLQWFVRMKELAKPAIEAVREGEIRFFPDGWKNTYYDWLE-NIRDWCV 418

Query: 210 SRKTFDWGIKIPD-----------------------------DPQYIMYVWIDALTNYLT 240
           SR+   WG  IP                              DP  ++  W  +      
Sbjct: 419 SRQ-IWWGHPIPAWHCLDCQEMVVDSRKPERCPRCGSEKLSADPD-VLDTWFSSSLWPFV 476

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHK 299
           T G+ ++    + +F+P  L V G DIL F               P  + V+ H  +  +
Sbjct: 477 TLGWPEDTPDLR-RFYPTTLLVTGFDILFFWVARMVMMGYHFTGKPPFRDVYIHALVRDQ 535

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G+K++KS GNV+DP+E+++  G DA R  LV   + G+D     + ++     +  + I
Sbjct: 536 FGQKMTKSKGNVVDPLEIMDRYGTDAFRMTLVHMASPGRDIRLSTERVEG--FRNFVSKI 593

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N           +         +  + ++  IL   S+ + ++R          A   +
Sbjct: 594 WNAFRYVERFAPGETRIPEIDEQSLQSPANRWILVSLSQAVADMRRYFGLYRFDEAANTL 653

Query: 418 ISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                    D + +A K    + + +P++  TV  +       L  +    +P +  +++
Sbjct: 654 YHFTWHLYCDWFIEASKSVLDRPENDPEKIETV-RILRFTGSVLLRMAHPVMPFVTGELW 712

Query: 475 DILFVAD---ENRCFQS 488
           +IL+  +   E + F  
Sbjct: 713 EILYADELPLEEQTFPD 729



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 82/243 (33%), Gaps = 24/243 (9%)

Query: 13  IAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN------ 64
           I  PN   + H+GHA  + + DV+ARF +++G DVL+  GTD  G       +       
Sbjct: 56  IPPPNITGRLHMGHALNITLQDVVARFRKMEGQDVLWIPGTDHAGIATQNVVERQLSREG 115

Query: 65  ---AGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKK 112
                +T + FV +             D    L   +S+++   T +         ++ +
Sbjct: 116 TALRSMTREEFVTRVWEWKDSIKSGILDQITRLGASLSWENERFTMDAGFSRAVTEVFIR 175

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWMEEEGYFFRL 169
           +  +G +Y+G     +  R     +D EV          Y     +P +         R 
Sbjct: 176 LYREGFLYRGERMIHWCPRCLTALSDVEVTYVEKSGTLYYVRYGESPGRDQSLVVATTRP 235

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-PDDPQYIM 228
                                  R   +  ++  +  ++ S    ++G  +    P + M
Sbjct: 236 ETIFADQALAVHPEDARYQKWIGRKVFVPLIQREIPVIADSAVDPEFGTGVLKITPSHSM 295

Query: 229 YVW 231
             W
Sbjct: 296 ADW 298


>gi|33862238|ref|NP_893799.1| valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|81575511|sp|Q7UZI3|SYV_PROMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33634456|emb|CAE20141.1| Valyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 918

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 137/361 (37%), Gaps = 21/361 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              + +  +  Y +   N   W      ++        +L   E   +   P        
Sbjct: 390 PTFIPQRWEKVYKDWLDNINDWCISRQLWWGHQIPAWYVLKQSEDSIDQNTP-------Y 442

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++  + LS + K F   +++  D   ++  W  +     +T G+ +  D    K++P
Sbjct: 443 VVARNEKEALSKATKEFGSNLQLIRDKD-VLDTWFSSGLWPFSTLGWPNINDADFKKWYP 501

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + + G DI+ F    +       + N+P               +K+SKS GN IDP+ 
Sbjct: 502 NSVLITGFDIIFFWVARMTMMGKTFTNNIPFKDVYIHGLVRDENNKKMSKSSGNGIDPLL 561

Query: 316 VIEEVGVDALRYFLVREIA-CGKDGFYDKDGLKK-----RVNADLANGIGNLVSRSV--S 367
           +I++ G DALR+ L+RE+A  G+D   D D  +        + + AN + N     +   
Sbjct: 562 LIDKYGSDALRFALLREVAGAGQDIRLDYDRKENTSSTVEASRNFANKLWNATKFVLINK 621

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
              ++             SD+ ILS  +++  ++   +    +  +   +         D
Sbjct: 622 TFSENCSLNESDEKNLELSDKWILSKLNQLNTKVSNLLIEYKLGESAKLLYEFAWNDFCD 681

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            Y +  K     K   +R  +   + ++V+  + +++  F+P +  +++  L +  E   
Sbjct: 682 WYVEFAKQKFNNKETHNRKIS-EKILIKVLTDVLVMMHPFMPHITEELWHKLQIKPEQIL 740

Query: 486 F 486
            
Sbjct: 741 L 741



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA+   + DV+ RF RL G +VL   GTD     +    + 
Sbjct: 41  DPFCIVIPPPNVTGSLHMGHAFNTALIDVIIRFQRLLGKNVLCLPGTDHASIAVQTILEK 100

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
              T                  ++ +Q+          +  S D      T +++ ++  
Sbjct: 101 QLKTEGKNSEDIGREEFLKRAWIWKEQSGGKIISQLKRIGYSVDWERERFTLDEKLNEAV 160

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + +K  IY+G Y   +    ++  +D EV       Y      P+
Sbjct: 161 VEAFNILHEKKLIYRGEYLVNWCPASQSAVSDLEVEMQEVNGYLWHFKYPL 211


>gi|283786940|ref|YP_003366805.1| valyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282950394|emb|CBG90042.1| valyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 951

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEQGNVYVGRSEEEVRQENNLGAEVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDAL--------------------------------- 325
           +G+K+SKS GNVIDP+++++ + +  L                                 
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLAEKIAKRTEKQFPDGIEPHG 610

Query: 326 ----RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
               R+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTDAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G       + 
Sbjct: 33  ESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       +R  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|300901153|ref|ZP_07119258.1| leucyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|331662007|ref|ZP_08362930.1| leucine--tRNA ligase [Escherichia coli TA143]
 gi|300355392|gb|EFJ71262.1| leucyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|331060429|gb|EGI32393.1| leucine--tRNA ligase [Escherichia coli TA143]
          Length = 907

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 77  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  K  +
Sbjct: 137 AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKDLV 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 197 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 252

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 253 LDKLDHWPDTVKTMQRNWIGRSEG 276



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 537 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 596

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 597 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 656

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 657 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 712

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 713 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 770

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 771 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 817

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 818 TLWQELKGEGDIDNAPWPVADEK 840


>gi|317123001|ref|YP_004103004.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592981|gb|ADU52277.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 897

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y      YP+ + H+GH     I D  ARF R+ G +VL+  G D  G     AA
Sbjct: 33  SRPKFYCLEMYPYPSGKLHMGHVRNYSIGDATARFLRMRGYNVLYPMGWDSFGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R+    L +SYD    I  +   ++   + L+  +  +G + 
Sbjct: 93  IANQTHPAEWTYANIAAMREQMQRLGLSYDWRREIACSHPGYYKWTQWLFLLLYKRGLVE 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  R      +++V  GA          PV+  E E +FFR++AY D+LL   
Sbjct: 153 RKKAPVNWCPRCATVLANEQVEDGA----CWRCGTPVEKRELEQWFFRITAYADRLLKDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 209 DLLEGWPERVKVMQRNWIGRSEGM 232



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 13/153 (8%)

Query: 228 MYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
           M  ++D+   Y             D  K  +W P D ++ G +    H +Y         
Sbjct: 498 MDTFVDSSWYYYRYTSPRDEHQPFDREKVFYWLPVDQYIGGIEHAVLHLLYSRFITKVLY 557

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L  +    +++ + G ++  G K+SKS GNV+ P +++EE G DA R F++      
Sbjct: 558 DEGLVPSPEPFRRLLTQGMVIKDGAKMSKSKGNVVSPEDILEEYGADATRLFILFAAPPE 617

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           +D  + + G++    +     +  LV+     I
Sbjct: 618 RDLEWSEHGIEGA--SRFVQRVWRLVTGCAEAI 648



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 49/130 (37%), Gaps = 16/130 (12%)

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            P    +   ++++     R +  +  ++ +    + A+A ++ LV+ +  Y D  +P  
Sbjct: 719 QPAMQGWGPEEQALWREVHRAIARVTTDIAERMQYNTAVAALMELVNAIYGYRDRVEP-- 776

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-----NRCFQSLD 490
                   A+    +    + +L  +L  F P LA + +++L           + + + D
Sbjct: 777 --------AAQRADLLAAALDRLLRMLAPFTPYLAEEAWELLGWRATRGSVHRQPWPAWD 828

Query: 491 QRLKPGFMLH 500
             +     + 
Sbjct: 829 PAVLEAGTVE 838


>gi|330863394|emb|CBX73516.1| leucyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 552

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  TSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++          +D  I T    ++   +  + K+ +KG +
Sbjct: 90  AVKNNTAPAPWTYDNIEYMKNQLKLLGFGYDWDREITTCSPDYYRWEQWFFTKLYEKGMV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+ 
Sbjct: 150 YKKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITDYADQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +    +   ++           G   + +++ S +        PD    + YV + A 
Sbjct: 206 LDRLESWPEQVKTMQRNWIGRSEGVDIVFNVADSEEKLSVYTTRPDTFMGVTYVAVAAG 264


>gi|326319246|ref|YP_004236918.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323376082|gb|ADX48351.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 897

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 6/219 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA
Sbjct: 31  GKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSREVATCDPDYYRWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLKITDYAQELLDHV 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +            ++V    ++ +      R  F   I+
Sbjct: 207 QVGNPNATLTGWPDKVRLMQENWIGKSEGVRFAFTHDIR 245



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 110/333 (33%), Gaps = 40/333 (12%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +++   YF R    ++           ++   +    +   +   L     ++   D G+
Sbjct: 513 FVDSSWYFMRYCDPKNPDAMVAGGADYWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGL 572

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKDILRFHAIYW 275
              D+P          L        ++ +    K     FWP D+          H +  
Sbjct: 573 VKVDEP-------FTKLLTQGMVLNHIYSRRTEKGGKEYFWPHDVE---------HVLDE 616

Query: 276 PAFLLSANLP-LPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  A L      + +   I ++G   +SKS  N +DP ++IE+ G D  R + +   
Sbjct: 617 AGKITGARLKNAVGDLPAGTPIDYEGVGTMSKSKNNGVDPQDLIEKYGADTARLYTMFTA 676

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-----E 388
                  ++  G++          + N   +   +     +  I    +  +       +
Sbjct: 677 PPEATLEWNDAGVEGSYR--FLRRVWNFGVKLTGIDAAATEAAIQGAESLKDVQFGKEAK 734

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           ++      VL+++  + Q    +  ++  + +++ ++ +     P  L            
Sbjct: 735 ALRLEIHTVLKQVDYDYQRMQYNTVVSGAMKMLNALEDFKSTDAPGGLV----------- 783

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +E    L  +L    P +A+ ++  L  A+
Sbjct: 784 -ALIEGFGILLRVLYPATPHIAHGLWSSLGYAN 815


>gi|188585176|ref|YP_001916721.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229559953|sp|B2A6C2|SYL_NATTJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|179349863|gb|ACB84133.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 826

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+     YP+ + H+GH     I DVLARF R+ G +VL   G D  G     AA
Sbjct: 30  NKDKYYVLEMFPYPSGKLHMGHMRVYSIGDVLARFQRMRGYNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  N +D    L  SYD    + T    ++   + ++ ++   G  Y
Sbjct: 90  IENQDLPSRWTYANIDNMKDQLQALGTSYDWKREVSTCSPDYYKWTQWMFLQLYKNGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    E    +++V  GA         + V+  +   +FF+++ Y D+L    
Sbjct: 150 KKKAPVNWCPECETVLANEQVENGA----CWRCDSMVEQKQLSQWFFKITEYADRLDQDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E   E+   ++   +       G
Sbjct: 206 ELLEEWPDRVKTMQKNWIGKSQG 228



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 106/283 (37%), Gaps = 35/283 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAF 278
           D              Y T              +W P D ++ G +    H +Y   +   
Sbjct: 499 DTMDTFVCSSWYFLRYTTPWDNEVPFRQEDVNYWMPVDQYIGGIEHAVLHLLYARFFTKV 558

Query: 279 LLSANLPLPKKVFS----HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +        K+ FS     G +   G K+SKS GNV+ P E++   G D  R F++    
Sbjct: 559 MYDQGYTNFKEPFSRLLAQGMVNKDGAKMSKSKGNVVSPDEILRTYGADTGRLFILFAAP 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILS 392
             KD  ++ +G++         G    + R   ++  + +   +      FT+ D+    
Sbjct: 619 PEKDLDWNDEGVE---------GCYRFLQRLYRLVNDNQNLVDLQLDDTKFTKEDKEYHR 669

Query: 393 VCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           +  + ++++ +++ +    + A++ ++ L +   +Y              ++      + 
Sbjct: 670 LIHKTIKKVTDDISERHNFNTAISAIMELTNASSKY-------------KEQKEVNESLL 716

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
              +  + +LL  F P +A ++++ L   D      + S D++
Sbjct: 717 RTGLETIVMLLAPFTPHIAEELWETLGYQDSVHKLNWPSYDEK 759


>gi|291548691|emb|CBL24953.1| isoleucyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 1051

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/456 (14%), Positives = 143/456 (31%), Gaps = 14/456 (3%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    DE G                FV +         D   + YD        
Sbjct: 343 RKYDLPFVQLVDEKGDMAESTPFAGL-----FVKKADPEVLKDLDARGLLYDAPKFEHSY 397

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            H   C       + +    K        +R+    N      G  G++ +   N   W 
Sbjct: 398 PHCWRCDTPLIYYARESWFIKMTAVREDLIRNNNTINWIPESIG-KGRFGDWIENVQDWG 456

Query: 161 EEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                ++      +Q +    +       L     N             +++ K  + G 
Sbjct: 457 ISRNRYWGTPLNIWQCECGHMHSIGSIEELKSMSDNCPDDIELHRPYIDAVTIKCPECGK 516

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++   P+ ++  W D+ +       Y         + +PAD      D     F+++   
Sbjct: 517 EMHRVPE-VIDCWFDSGSMPFAQHHYPFENQDLFERQFPADFISEAVDQTRGWFYSLLAI 575

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + LL    P    +         G+K+SKS GN +DP + +E+ G DA+R++     A  
Sbjct: 576 STLLFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYINSAPW 635

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
               +    +++     +           +   + ++D    T         D+ ILS  
Sbjct: 636 LPNRFHGKAVQEGQRKFMGTLWNTYAFFVLYANIDNFDATKYTLEYDKLPVMDKWILSKM 695

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + +++++  N+ N  I  A   +   V ++ + Y    +     K               
Sbjct: 696 NTMVKDVDYNLGNYRIPEAARVLQDFVDDLSNWYVRRSRERFWAKGMEQDKINAYMTLYT 755

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  ++      +P +  +I+  L  + +    +S+
Sbjct: 756 ALVTVSKAAAPMIPFMTEEIYQNLVRSIDKDAPESI 791



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 62/192 (32%), Gaps = 22/192 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M E+               N +PHIGH    +I D++ R+  + G  V    G D HG  
Sbjct: 32  MDEKEGCPDYIFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLP 91

Query: 58  IAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTT 98
           +    +                       K  V +    + + +  +    D      T 
Sbjct: 92  VELEVEKLLGLDGKDQIEKYGLEPFIKKCKESVWKYKGMWENFSGTVGFWADMEHPYVTY 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +    ++     K+I DKG +YKG     Y  R     +  EV +G       +     +
Sbjct: 152 DNNFIESEWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFK 211

Query: 159 WMEEEGYFFRLS 170
             +E+ Y    +
Sbjct: 212 VKDEDAYILAWT 223


>gi|157147738|ref|YP_001455057.1| valyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157084943|gb|ABV14621.1| hypothetical protein CKO_03542 [Citrobacter koseri ATCC BAA-895]
          Length = 951

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDAGNVYVGRSEDEVRQENNLSADVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPDLLEKRTGNMMQPQLAEKIAKRTEKQFPDGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|156935583|ref|YP_001439499.1| valyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533837|gb|ABU78663.1| hypothetical protein ESA_03447 [Cronobacter sakazakii ATCC BAA-894]
          Length = 951

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGNVYVGRSEEEVRQENNLSADVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLEELLEKRTGNMMQPQLAEKIRKRTEKQFPEGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + N     A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWILAEFNQTVKAYRDALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|156935601|ref|YP_001439517.1| valyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533855|gb|ABU78681.1| hypothetical protein ESA_03466 [Cronobacter sakazakii ATCC BAA-894]
          Length = 951

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGNVYVGRSEEEVRQENNLSADVALRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLEELLEKRTGNMMQPQLAEKIRKRTEKQFPEGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + N     A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWILAEFNQTVKAYRDALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|92115038|ref|YP_574966.1| valyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|91798128|gb|ABE60267.1| valyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 947

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 133/393 (33%), Gaps = 80/393 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F  +       ++  E+     +P    N   ++++  L+D  +SR+   W
Sbjct: 372 IEPLLTDQWFVAVEELAKPAIAAVENGDIEFVPKNYENMYFAWMRD-LQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +      T G+ +
Sbjct: 430 GHRIPAWYDGDGNVYVARSAEEARDKYGLAADAALTQDEDVLDTWFSSGLWTFATLGWPE 489

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P+ + V G DI+ F    +       +  +P  K          +G+K+S
Sbjct: 490 QTPELETFH-PSSVLVTGFDIIFFWVARMIMMTLKFTGEVPFKKVYVHGLVRDAQGQKMS 548

Query: 305 KSLGNVIDPIEVIEEV-------------------------------------GVDALRY 327
           KS GNV+DPI++I+ +                                     G DALR+
Sbjct: 549 KSKGNVLDPIDLIDGIDLDALIDKRTGNMMQPQKAKAIAKATRDEFPDGIEPHGTDALRF 608

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
             + +   G+D  +D   L      +  N + N  SR V M  +  D  +      + +D
Sbjct: 609 TFLSQATTGRDIKFDMGRLDG--YRNFCNKLWN-ASRYVLMNAEGEDCGLEGEVELSLAD 665

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
             I+S   +   ++   M+      A   +   V     D Y +  KP  L   N   A+
Sbjct: 666 RWIVSRLQQTEAQVTRAMEEFRFDHASQALYDFVWNEYCDWYLELSKP-VLWDDNATAAA 724

Query: 446 T--VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   V V+  +  L    +P ++ +I+  
Sbjct: 725 KRGTRRTLVRVLETILRLAHPMIPFISEEIWQR 757



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA++  I D L R+ R+   + L+  GTD  G       + 
Sbjct: 31  EPYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRWRRMQQRNTLWQVGTDHAGIATQMLVER 90

Query: 64  --------------NAGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKRHH 103
                             T K++  ++      +R  R M   +D S + F  T +   +
Sbjct: 91  KVAAEDGKSRHELGREAFTDKIWEWKHESGGHITRQLRRMGASVDWSRERF--TMDDGFY 148

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++ D+G IY+G     +        +D EV        +     P+
Sbjct: 149 KAVQDVFVRLFDEGLIYRGKRLVNWDPTLHTAISDLEVENKDQQGQFWHFRYPL 202


>gi|312137335|ref|YP_004004672.1| isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225054|gb|ADP77910.1| Isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 1036

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 11/283 (3%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G K+   P  ++ VWID+      +  Y         K +P D    G D     F
Sbjct: 500 KCECGGKMKRIPD-VLDVWIDSGVAGWASINYPKEKK-LFEKLFPYDFITEGHDQTRGWF 557

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++      +    +P  K +     +  +G K+SKSLGNV++P EVI + G D LR++L+
Sbjct: 558 YSQLGCGVIAHEKIPYKKVLMHGFTLDEQGRKMSKSLGNVVEPEEVIRKYGADVLRFYLL 617

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +D  +  +   K VN          V  +  M L +++          + D+ I
Sbjct: 618 WANKPWEDLRFVWEE-VKTVNKMFNILWNVYVFATTYMSLDNFNPHKCKEFELKKEDKWI 676

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRAST 446
           LS  + V +++ E M+N L+H+A   +   +       Y      + W ++K +P +   
Sbjct: 677 LSKVNSVAKKVSEYMENLLLHKASRIIYDFIVEDLSRWYVKLIRSRTW-IEKDDPIKLGA 735

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             Y    V++QL  ++    P +  +I+  +    +    +S+
Sbjct: 736 -YYALYNVLKQLITIMAPITPHITEEIYQNIVRGVDPAAPESV 777



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 54/180 (30%), Gaps = 20/180 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K            Y + + H+G A+  II D   RF  + G +V    G D HG  I   
Sbjct: 37  KNGPIYSFLDGPPYCSGRIHLGTAWNKIIKDTYLRFKSMQGFNVNRKPGWDAHGLPIEHK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +                        K F  +N          L +   +DD   T +  
Sbjct: 97  VEKKLGVKTKKEIEEEIGIANFVSECKKFAIENKNAMTKQFKKLGVWMDWDDPYITFDPN 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + ++C    KK  +K  + K      +  R E      E+              P++  +
Sbjct: 157 YIESCWWTIKKAHEKDLLKKDLRVISWCPRCETAIASAEIEYKETEDPSIYVKFPIEENK 216


>gi|152973135|ref|YP_001338281.1| valyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150957984|gb|ABR80014.1| valyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 951

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADMLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  I++  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWIIAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            N        +  V V+  L  L    +P +   I+  
Sbjct: 727 GNEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|91202284|emb|CAJ75344.1| strongly similar to valyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 922

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 136/404 (33%), Gaps = 42/404 (10%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D  +       +       ++      +F ++    D  +    +      P  R  +V 
Sbjct: 363 DRIIPHKHSVGHCYRCQTVIEPYFSNQWFVKMRPLADAAIQASLNKSVTFYPE-RWEKVY 421

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP----------------------------DDPQYIMY 229
                 ++D  +SR+   WG +IP                               + ++ 
Sbjct: 422 LSWLDNVRDWCISRQ-IWWGHRIPAWYCYDCGAISVSTGDINQCTKCSSPRLKQDEDVLD 480

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +     +T G+        A ++P    V  + I+ F    +      +   +P  
Sbjct: 481 TWFSSALWPFSTLGWPKETP-ELAYYYPTSTLVTDRGIIYFWVARMVMMGIEMVKQVPFS 539

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                   +  +G K+SKSLGN IDP+ +I+  G DA+R+ ++     G+D    +   +
Sbjct: 540 HVYIHGTILDEQGRKMSKSLGNGIDPLLMIDRYGADAVRFSIIILTTEGQDVKLSESKFE 599

Query: 348 KRVNADLANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             +  +  N + N      +++  ++ + +          D+ I S  +  ++E   ++ 
Sbjct: 600 --MGRNFTNKLWNAARFIFMNLSEENPEEITYDITTLPFEDKWIHSRLNTTIEECTASLD 657

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A  ++         D Y +  K       N             +  +   LL  
Sbjct: 658 QYKFNDAAMKMYDFTWHTFCDWYLEIVKHRLNNANNRIDKKNAQTTLAIIFGKTLHLLHP 717

Query: 465 FVPKLANKIFDIL-FVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           F+P +  ++++ L  +A  N+    +      G  L  +  PIF
Sbjct: 718 FIPFITEELWNNLTRIAQHNKIALQIGG---TGSSLVTSRCPIF 758



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 55/169 (32%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA   II D+L R+ R+ G +VL+  GTD  G      
Sbjct: 62  SSKKPYTIVIPPPNVTGVLHVGHALNNIIQDILIRWKRMQGFNVLWMPGTDHAGIATQNV 121

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    +                   +  Q           L  S D      T ++   
Sbjct: 122 VERELSSKNIKRQDIGRERFIEEVWKWKQQYGSTIIQQLKKLGSSCDWQRERFTMDEGLS 181

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           D  +  + ++  KG IYKG Y   +  R      DDEV       +   
Sbjct: 182 DAVKETFVRLYRKGLIYKGKYMINWCPRCRTALADDEVEHEEHEGHLWH 230


>gi|16759607|ref|NP_455224.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29142620|ref|NP_805962.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213161487|ref|ZP_03347197.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425088|ref|ZP_03357838.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|289823653|ref|ZP_06543265.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|29337027|sp|Q8Z8H5|SYL_SALTI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|25292972|pir||AC0582 leucyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501899|emb|CAD05125.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138251|gb|AAO69822.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 860

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 90.2 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 106/323 (32%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V               A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E ++ +  +L  F P +  
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEGEQDRALLQEALQAVVRMLNPFTPHVCF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELGGEGDIDNAPWPVADEQ 793


>gi|116754118|ref|YP_843236.1| valyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121692889|sp|A0B7C2|SYV_METTP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|116665569|gb|ABK14596.1| valyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 855

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 136/389 (34%), Gaps = 30/389 (7%)

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
            W         ++ + +            + ++W+  E    RL  +   +   +    +
Sbjct: 339 CWRCKTPIEILSERQWFVRIYPDVIIKTADEIEWV-PEHMKLRLKNWTGTMEWDWCISRQ 397

Query: 186 FI-------LPIERRNEVISFVKSGLK---DLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +          +R  EV+   +  L      +    +   G    +  + ++  W+D+ 
Sbjct: 398 RVFATPIPAWYCKRCGEVMVAKEEWLPLDPTKTQPPVSCSCGSNEFEPEEDVLDTWMDSS 457

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSH 293
            + L  TG+L      +   +PA L   G DI+R  A Y    +  L    P    + + 
Sbjct: 458 ISALHVTGWLSR----EDPRYPAQLRPQGHDIIRTWAFYTILRSMALVGVKPWETILING 513

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +   G K+SKSL N + P EV E+ G DALR +     + G D  +    +     + 
Sbjct: 514 MVLGEDGRKMSKSLNNFVIPEEVFEKNGADALRQWAALGGSPGSDVMFQWKEIVAA--SR 571

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               + ++   +             T   FT+ D  +L     ++ ++ + M+      A
Sbjct: 572 FQQKLWSIYRFAAPFASD-------TDAPFTQIDRWLLGELGMLVSKVTDAMEAFQFDEA 624

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              + +   E   D Y +  K   L   + D           V+  L  L+  F+P +  
Sbjct: 625 FRAIRAFTWEVLADDYIEIVKS-RLYGPDSDERRAAQATLYRVLDVLCRLMAPFIPFITE 683

Query: 472 KIFDIL-FVADENRCFQSLDQRLKPGFML 499
           +I+  L   +   + + SL+    P   L
Sbjct: 684 EIYTSLTGKSVHTQSWPSLETYTSPEGAL 712



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 15/146 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG      
Sbjct: 32  SEKPQYIIDTPPPYPTGNFHIGNALNWCYIDFVARYKRMRGYNVMFPQGWDCHGLPTEVK 91

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                 Q     R     L IS D  +   T +  ++   
Sbjct: 92  VEETYHITKNQVPREEFRRLCEEMTAQAIERMRRTITRLGISTDWSNEYITMKPEYYVKT 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRD 132
           +  + ++ +KG IY+  +   +  R 
Sbjct: 152 QRSFVQMYEKGMIYREDHPVNWCPRC 177


>gi|82701645|ref|YP_411211.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123768294|sp|Q2YBQ2|SYL_NITMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82409710|gb|ABB73819.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 866

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y  +   YP+ + H+GH     I DVL+R+HR+ G +VL   G D  G     AA
Sbjct: 31  EKRKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMQGYNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    R     L +   +D  + T +  ++   + L+ ++ +KG  Y
Sbjct: 91  MQNNVPPAKWTYDNIAYMRKQLQSLGLAMDWDRELATCQPDYYRWNQWLFLRMLEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   Y+ +++AY D+LL   
Sbjct: 151 RTTGIVNWDPVDQTVLANEQVIDG----RGWRTGALVEKHEIPMYYMKITAYADELLEAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
            + P +   +            G
Sbjct: 207 NALPGWPERVRTMQANWIGKSFG 229



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 99/316 (31%), Gaps = 83/316 (26%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK---FWPADLHVIGKDILRFHAIY---WPAFLLS 281
           M  ++D+   Y+       +     A+   + P D ++ G +    H +Y   W   +  
Sbjct: 495 MDTFVDSSWYYIRYACTDQHRAMVDARVDYWLPVDQYIGGIEHAILHLLYSRFWSKVMRD 554

Query: 282 ANLPLPKKVFSH------------------------------GFILHKGEK--------- 302
             L L  + F++                                   +G +         
Sbjct: 555 LGLVLFDEPFANLLTQGMVLNEIMFRKTGSGRIVYFNPADVDIQTDEQGRRIGAVLRADG 614

Query: 303 ----------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                     +SKS  N +DP +++E+ G D  R F++      +   +   G++     
Sbjct: 615 QPVEAGGIGTMSKSRNNGVDPQKLVEQYGADTARLFMMFASPPEQTLEWADAGVE----- 669

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQN 407
               G    + R    +           G           +++     + + ++ +++  
Sbjct: 670 ----GAFRFLKRLWKQVYDHLQQSGVANGPIPVAGLGPELKALRFQLHQTIAKVGDDLGR 725

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L++ + +      P            +   +  E +  + +LL   V
Sbjct: 726 RHTFNTAIAAVMELMNALGK-LQDSSP------------SARGLMQEALENIVLLLSPIV 772

Query: 467 PKLANKIFDILFVADE 482
           P + + ++  L    E
Sbjct: 773 PHICHVLWRELRPGTE 788


>gi|255012376|ref|ZP_05284502.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|298374756|ref|ZP_06984714.1| valine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298269124|gb|EFI10779.1| valine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 873

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 125/374 (33%), Gaps = 56/374 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L           P + +N         +KD  +SR+   
Sbjct: 349 PIEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPPKFKNT-YRHWMENIKDWCISRQ-LW 406

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       + ++  W  +    +
Sbjct: 407 WGHRIPAYFLPEGGYVVAETEEKALELAKEKCGNPNLTMSDLRQDEDVLDTWFSSWLWPI 466

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    ++NPD  +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 467 SLFDGINNPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKMPFKSVYFTGIVR 526

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D    ++    +  N
Sbjct: 527 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMLAAPAGNDIPFDDALCEQ--GRNFNN 584

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         +   D  I  P A   + +       + + E+ ++     +  A+  
Sbjct: 585 KIWNAFRLVKGWTV---DDTIAQPEASAIAVKWFKMQLDKTIAEVDDSFSKYRLSEAMMA 641

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P     +   T E        L  LL  F+P +  +
Sbjct: 642 VYKL------FWDEFSSWYLEMVKPGYQQPIDKATYEATLGFFDALLRLLHPFMPFITEE 695

Query: 473 IFDILFVADENRCF 486
           ++  L    E    
Sbjct: 696 LWQALEPRKEGESL 709



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMMGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +++  +
Sbjct: 92  VNRLAGQGIKKTDLTRDEFLRHAWEWKEEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  +  KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFVDLYKKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|320539653|ref|ZP_08039317.1| leucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030265|gb|EFW12280.1| leucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 860

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++          +D  I T +  ++   +  + K+ +KG +Y
Sbjct: 91  VKNHTAPAPWTYDNIEYMKNQLKLLGFGYDWDREIATCQPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----GCWRCDTKVERKEIPQWFIKITDYADQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++          +G
Sbjct: 207 DTLESWPEQVKTMQRNWIGRSAG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 104/307 (33%), Gaps = 78/307 (25%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSANL-------PLPKK 289
           Y     +    D + A +W P D ++ G +    H +Y+  F                K+
Sbjct: 503 YTCPQYHHGMLDPTAANYWLPVDQYIGGIEHAIMHLMYFRFFHKLMRDTGLVDSDEPAKR 562

Query: 290 VFSHGFIL--------------------------HKGE------------------KISK 305
           +   G +L                           KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYTGNSGERIWVSPTDATVERDDKGRIVKATDPQGRELVYAGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP E++E+ G D +R F++          + + G++         G    + R 
Sbjct: 623 SKNNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVE---------GASRFLKRV 673

Query: 366 VSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
             +     +     P       E  +++     + + ++ +++  +   + A+A V+ L+
Sbjct: 674 WKLTYDHLEKGAVQPLDVTTLNEDQKALRRDLHKTIAKVSDDIGRRQTFNTAIAAVMELM 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++     A+ P   +++  DRA     +  E +  +  +L  F+P +   ++  L    
Sbjct: 734 NKL-----ARAP---QESEQDRA-----LLQEALLAVVRMLYPFIPHIGFSLWQALGGKG 780

Query: 482 ENRCFQS 488
           +      
Sbjct: 781 DIDTAPW 787


>gi|85713011|ref|ZP_01044049.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693180|gb|EAQ31140.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 859

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+ + H+GH     + DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  EKEKFYCLSMFPYPSGKLHMGHVRNYTLGDVVSRYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  QN    R+    L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 91  IQNKTAPAKWTYQNIEYMREQLKRLGFGYDWQREVATCSPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y D+LL   
Sbjct: 151 KKNATVNWDPVDQTVLANEQVIDG----RGWRSGAKVEQKEIPQWFIKITDYADELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           GL
Sbjct: 207 DQLDGWPEQVKAMQRNWIGRSEGL 230



 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 74/195 (37%), Gaps = 27/195 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          +   G++         G   
Sbjct: 618 SKMSKSKNNGIDPQTMVERYGADTVRLFMMFAAPPEMTLEWSDSGVE---------GAQR 668

Query: 361 LVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQV 417
            + R   +     +            +  +++     + + ++ ++M + Q  + A+A +
Sbjct: 669 FLRRVWKLTYDFIEAGGYHQNDVELNKDQKALRRELHKTIAKVSDDMGRRQHFNTAIAAI 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++ + +      P    +T  DR      V  E I  +  +L    P +   +++ L
Sbjct: 729 MELLNHLQK-----AP---VETEADRV-----VMGEAIDAMIRMLAPITPHICEHLWEQL 775

Query: 478 FVADE--NRCFQSLD 490
              D      + S+D
Sbjct: 776 GHQDSLIAADWPSVD 790


>gi|227114626|ref|ZP_03828282.1| valyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 951

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 133/396 (33%), Gaps = 85/396 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAAVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDANGNVYVGRTEAEVRSENNLADDVVLNQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                KA   P+ + V G DI+ F         +           +P      +      
Sbjct: 492 QTPDLKAFH-PSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFGAGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  +L+  +R ++  RE +       A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADRWVLAEFNRTVKAYREALDGYRFDIAANILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +        +  V V+  L  L    +P +   I+
Sbjct: 727 GSEAELRGTRHTLVTVLEALLRLAHPIIPFITETIW 762



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+D+  +             R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWQWKGESGGNITNQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENREVKGSMWHLRYPL 204


>gi|89055968|ref|YP_511419.1| valyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88865517|gb|ABD56394.1| valyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 1029

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 10/268 (3%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           +K+  DP  ++  W  +    + T G+ +       +++P    + G DI+ F    +  
Sbjct: 591 VKLRRDPD-VLDTWFSSGLWPIGTLGWPEQTP-ELDRYFPTSTLISGFDIIFFWVARMMM 648

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +  ++P             KG K+SKS+GNV+DP+E+I+E G DALR+ L    A 
Sbjct: 649 MQLAVVDDVPFRDVYVHALVRDEKGRKMSKSIGNVLDPLELIDEYGADALRFTLTAMAAM 708

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D     D ++     +    + N  +R   M     D            ++ I++  +
Sbjct: 709 GRDLKLSTDRIQG--YRNFGTKLWN-AARFAEMNECVPDPAFDPKSPTQTVNKWIITETA 765

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R      E ++N   + A   +   V     D Y +  KP      +    +        
Sbjct: 766 RARIAHDEALENYRFNDAAGGLYQFVWGKVCDWYLEFAKP-LFASGDDAVIAETRATMAW 824

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD 481
           VI Q  ILL   +P +  +++  +   D
Sbjct: 825 VIDQCLILLHPTMPFITEELWSEIATRD 852



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 57/181 (31%), Gaps = 28/181 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + DVL R+HR+ G D L+  GTD  G       + 
Sbjct: 35  EPFSIMIPPPNVTGVLHVGHAFNNTLQDVLTRWHRMRGFDTLWQPGTDHAGIATQMVVER 94

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTE-----KR 101
                                  +  ++    R+    L  S D      T         
Sbjct: 95  ELAKSQIQRKNLTREEFLAHVWEWKAKSGGTIREQLKRLGASCDWSREAFTMSGAPGAPE 154

Query: 102 -----HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                 HD    ++ ++ +KG IY+G     +    E   +D EV       +      P
Sbjct: 155 GEEGNFHDAVIKVFVEMYNKGYIYRGKRLVNWDPHFETAISDLEVENIDQPGHMWHFKYP 214

Query: 157 V 157
           +
Sbjct: 215 L 215


>gi|307627920|gb|ADN72224.1| leucyl-tRNA synthetase [Escherichia coli UM146]
          Length = 860

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKCFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 107/323 (33%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|153816425|ref|ZP_01969093.1| hypothetical protein RUMTOR_02678 [Ruminococcus torques ATCC 27756]
 gi|317502448|ref|ZP_07960611.1| isoleucine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089274|ref|ZP_08338176.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846260|gb|EDK23178.1| hypothetical protein RUMTOR_02678 [Ruminococcus torques ATCC 27756]
 gi|316896133|gb|EFV18241.1| isoleucine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330405826|gb|EGG85355.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 1049

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/467 (13%), Positives = 143/467 (30%), Gaps = 24/467 (5%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    DE G    +           FV +         D   + YD        
Sbjct: 343 RKYDLPFVQLVDEKGNMAEETPFAGL-----FVKKADPEVLKDLDARGLLYD------AP 391

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHN 155
           +   +    W+  +      +  +    +   E    ++            G++ +   N
Sbjct: 392 KFEHSYPHCWRCDTPLIYYARESWFIKMTAVKEDLIANNNTINWIPESIGKGRFGDWLEN 451

Query: 156 PVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              W      ++      ++ +    +       L     N             +++ K 
Sbjct: 452 VQDWGISRNRYWGTPLNIWECECGHMHSVGSIEELKEMSDNCPDDIELHRPYIDAVTIKC 511

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G ++   P+ ++  W D+ +       Y         + +PAD      D     F+
Sbjct: 512 PKCGKEMHRVPE-VIDCWFDSGSMPFAQHHYPFENKELFERQFPADFISEAVDQTRGWFY 570

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   + LL    P    +         G+K+SKS GN +DP + +E+ G DA+R++   
Sbjct: 571 SLLAISTLLFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYV 630

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDES 389
             A      +    + +     +           +   +  +D           +  D+ 
Sbjct: 631 NSAPWLPNRFHGKAVVEGQRKFMGTLWNTYAFFVLYANIDQFDATKYELEYNKLSVMDKW 690

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           +LS  + +++ +  N+ N  I  A   +   V ++ + Y    +     K          
Sbjct: 691 LLSKMNTMVKTVDTNLGNYRIPEAARALQEFVDDMSNWYVRRSRERFWAKGMEQDKINAY 750

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                 +  ++      +P +  +I+  L  + +    +S+   + P
Sbjct: 751 MTLYTALVTVSKAAAPMIPFMTEEIYQNLVRSVDQNAPESIHLCMFP 797



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 22/192 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M+ER               N +PHIGH    +I D++ R+  + G  V    G D HG  
Sbjct: 32  MEEREGCPDYIFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGSMVPRKAGWDTHGLP 91

Query: 58  IAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTT 98
           +    +                       K  V +    + D +  +      DD   T 
Sbjct: 92  VELEVEKLLGLDGKDQIEEYGLEPFIDKCKESVWKYKGMWEDFSGTVGFWADMDDPYVTY 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++     K+I DKG +YKG     Y  R     +  EV +G       +     +
Sbjct: 152 HNSFIESEWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFK 211

Query: 159 WMEEEGYFFRLS 170
             EE+ Y    +
Sbjct: 212 VKEEDAYILAWT 223


>gi|46579607|ref|YP_010415.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|60390718|sp|Q72CT7|SYL_DESVH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46449022|gb|AAS95674.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233411|gb|ADP86265.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 829

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N  N R     L  SYD    + T    ++   ++ + +  +KG +Y
Sbjct: 89  IKNGTHPAKWTFANIDNMRSQLKRLGYSYDWQREVATCTPEYYRWEQLFFLRFLEKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +  +      +++V +G          + V+  E   +F R++ Y ++LL+  
Sbjct: 149 RKKAAQNWCPKCHTVLANEQVIEG----LCWRCDSAVEQKELTQWFLRITDYAEELLADL 204



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 102/309 (33%), Gaps = 30/309 (9%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--- 253
           +     G   L  +   ++    +           +D             +    KA   
Sbjct: 461 VKTHDDGRSPLPHTPAFYECTCPVCGGKARRETDTMDTFVESSWYFARYTDATNDKAPFT 520

Query: 254 ----KFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKG 300
               ++W P D ++ G +    H +Y             +  + P    + + G +L  G
Sbjct: 521 PDALRYWLPVDQYIGGVEHAILHLLYSRFFTKALRDCGFIELDEPFA-NLLTQGMVLMDG 579

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP E+I   G D +R F +      +D  + + G++          +  
Sbjct: 580 SKMSKSKGNVVDPTEMIARYGADTVRLFCLFAAPPERDFDWSESGIEGSYR--FVGRVWR 637

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
           LV      +L           A T     +       +++  +++      + A+A V+ 
Sbjct: 638 LVEELREHLLAVGACSSTAEDAKTPVARELRLKEHATVRKAGDDLNDRFQFNTAIAAVME 697

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           LV+ +           L K       +   V    +  +  LL  F P L+ +++ +L  
Sbjct: 698 LVNAL----------YLAKDELVADESGRKVLSSAVSTVLTLLSPFTPHLSEELWALLGH 747

Query: 480 ADENRCFQS 488
            +       
Sbjct: 748 TESVSTLPW 756


>gi|15645767|ref|NP_207944.1| valyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501065|sp|P56000|SYV_HELPY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2314306|gb|AAD08195.1| valyl-tRNA synthetase (valS) [Helicobacter pylori 26695]
          Length = 874

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 131/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 332 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 390

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 391 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSETLEQD 448

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 449 KDVLDTWFSSGLWAFSTLGWGQEKSGLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 508

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 509 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 568

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N  S  + +  + +          T       S  +  
Sbjct: 569 DIKLSTTHLEN--NKNFANKLFNAASY-LKLKQESFKDKERLNEYQTPLGRYAKSRLNSA 625

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 626 TKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 675

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 676 KEALKLLHPFMPFISESLYHKL 697



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 37  IQEKNKRFCLMMPP-PNVTGVLHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 95

Query: 59  AKAAQNAGVTT---------KVFVDQNS-----------RNFRDMADVLDISYDDFIRTT 98
               +   ++          + F+ +                + +      S   F  T 
Sbjct: 96  QNVVEKQLLSQGIKKEDLGREEFIKKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 154 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 188


>gi|222150239|ref|YP_002551196.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254782480|sp|B9JV46|SYL_AGRVS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221737221|gb|ACM38184.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 876

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN  + R     + +S D      T +  ++   + L+  + +KG +Y+
Sbjct: 93  QNKVHPKDWTYQNIASMRAQLKSMGLSLDWSREFATCDVEYYQRQQYLFLDMMEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDQTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +   +   +    +       GL    
Sbjct: 209 TLDHWPEKVRLMQKNWIGRSEGLAIRW 235



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 118/345 (34%), Gaps = 39/345 (11%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               V     G+    + + +  +++   Y+ R +A  +   +       ++   +    
Sbjct: 486 TWRNVSCPCCGKAARRETDTMDTFVDSSWYYTRFTAPWEDKPTDPAVANHWLPVDQYIGG 545

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R   + G     +P          L                    
Sbjct: 546 IEHAILHLLYSRFFTRAMRETGHVAVSEP-------FKGLFTQGMVVHETYRLGSGANGQ 598

Query: 256 W--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W  PAD+ V   D  R       AFLLS+   +          +   EK+SKS  NVIDP
Sbjct: 599 WVAPADIRVEDVDGAR------RAFLLSSGEEVT---------IGSVEKMSKSKKNVIDP 643

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++   G D  R+F++ +    +D  + + G++          +  LVS +  ++    
Sbjct: 644 DDILGSYGADTARFFVLSDSPPDRDVIWSEAGIEGSHR--FVQRLWRLVSEAADVL---- 697

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                +  A   +  ++     + LQ +  ++     ++A+A++  L++          P
Sbjct: 698 -RTSASTPAKDGAGRAVSQAAHKTLQAVGADLDKLAFNKAVARIYELLN------TLAAP 750

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                +     S V  V       L  ++   +P LA + + +L 
Sbjct: 751 LTQVASGNADTSFVAAV-RNATEILIQIIAPMMPHLAEECWAVLG 794


>gi|299143925|ref|ZP_07037005.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518410|gb|EFI42149.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 1031

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 140/392 (35%), Gaps = 64/392 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +    H P+ +     ++  ++ ++DKL+    ++     P     +        L
Sbjct: 382 HNYPHCWRCHTPLIYYAHPSWYIEVTKFKDKLIEN--NNDVNWFPEFVGEKRFGNWLENL 439

Query: 205 KDLSLSRKTFDWGIKI-------------------------------------------- 220
            D ++SR    WG  +                                            
Sbjct: 440 NDWAISRSR-YWGTPLPLWRCECGHVESVGSRKELVEKAVEDIDETVELHRPYVDDIHLT 498

Query: 221 -------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                      + ++ VW D+         Y         + +PA+    G D     F+
Sbjct: 499 CPHCGKSMTREKDVIDVWFDSGAMPFAQWHYPFEHKDDFNELFPANFICEGIDQTRGWFY 558

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   +  ++   P    + +   +   G+K+SKS GN + P E+ ++ G D +R++L+ 
Sbjct: 559 SLLAISTYMTGVTPYKNVLVNDLILDKFGKKMSKSKGNTVQPFELFDKYGADTVRWYLMY 618

Query: 332 EIACGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                    +D+DGL++  +        I N  S   +    D      +     E D+ 
Sbjct: 619 VSPPWAPTKFDEDGLREAESKFFRSLRNIYNFFSLYANTDEIDPREFKVSYENRDEIDKW 678

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRAS 445
           +LS  + +L  ++ +M+   + R +  +   V     + Y   + ++ W+ +  +  +A 
Sbjct: 679 LLSKYNNLLLNVKADMEVFELTRVVRNIQDFVIEDFSNWYIRRNRRRFWKTEIDDDKKA- 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V   T EV+  +  ++  FVP +A ++F  L
Sbjct: 738 -VYNTTYEVMLGITKVIAPFVPFIAEELFKSL 768



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 49/161 (30%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N +P I H     + D+  R+  ++G  V    G D HG  +    + 
Sbjct: 40  EPYIFFEGPPTANGRPGIHHVMARTLKDLTCRYKTMNGYQVKRKAGWDTHGLPVEIEVEK 99

Query: 65  A--GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH-----------------HDT 105
                  +        +F  M       Y+   RT  KR                   ++
Sbjct: 100 RLDLHNKQDIEKYGIADFNKMCKESVFEYEREWRTLTKRMAYLIDLDHPYITLENDYIES 159

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              +  K+ + G IY+G     Y  R        EV +G +
Sbjct: 160 VWYILNKMFEDGLIYEGHKILPYCPRCGTGLASHEVAQGYE 200


>gi|268592786|ref|ZP_06127007.1| valine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311568|gb|EFE52021.1| valine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 964

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 75/417 (17%), Positives = 141/417 (33%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 387 IEPMLTDQWYVRTEPLARDAIKAVEDGRIQFVPRQYENMYFSWMRD-IQDWCISRQ-LWW 444

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 445 GHRIPAWYDEKGNVYVGRDEDEVRRENNLGADIALRQDDDVLDTWFSSGLWTFSTLGWPE 504

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 505 NTDALKTFH-PTDVLVSGFDIIFFWIARMIMMTMHFIKDENGEPQVPFKTVYMTGLIRDE 563

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 564 EGQKMSKSKGNVIDPLDMIDGISLEDLLEKRTGNMMQPQLAEKIAKRTRKEYPEGIEAHG 623

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  +  D       
Sbjct: 624 TDALRFTLAALASTGRDINWDMKRL--SGYRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 680

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            +F+ +D  I++  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 681 MSFSLADRWIMAQFNQTVKAYREALDTHRYDIAAGILYDFTWNEFCDWYLELSKP-AVHK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +     +  +EV+  L  L    +P +   I+  +     +  +    Q+  +
Sbjct: 740 GNEAQVRAARFTLIEVLEGLLRLAHPIIPFITETIWQRVKVVKGIDADTIMLQAFPE 796



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +           H+GHA++  I D + R+ R+ G + L+ TGTD  G      
Sbjct: 43  TTQDSFCVVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTDHAGIATQMV 102

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + D +D   + F  T ++
Sbjct: 103 VERKIAAEEGKNRHDYGRDAFIDKIWEWKAESGGTISQQMRRLGDSVDWDRERF--TMDE 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 161 GLSKAVKEAFVRLYKENLIYRGKRLVNWDPKLHTAISDLEVENREIKGSMWHLRYPL 217


>gi|167627979|ref|YP_001678479.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189030251|sp|B0U0E8|SYL_FRAP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167597980|gb|ABZ87978.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 813

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y  + + YP+   H+GH     I DV+AR+ ++ G +VL   G D  G     A
Sbjct: 29  KNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A     +   +   N    R   D L  S+D    + T ++ ++   +  + ++  KG  
Sbjct: 89  AIKHKKSPYEWTKSNIAYMRSQLDSLGFSFDWSREVATCDESYYKWEQWFFIQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            ++  E   +F +++ Y D+LL  
Sbjct: 149 YRKNSVVNWDPVDQTVLANEQVVDG----RGWRSGALIEKKEIPQWFLKITDYADELLKD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   ++           GL
Sbjct: 205 INQLDGWPEAVKTMQTNWIGKSKGL 229



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 95/264 (35%), Gaps = 30/264 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIY-------WPAF 278
              + ++   Y   T    +   S+   +  P D ++ G +    H +Y           
Sbjct: 492 FDTFFESSWYYARYTCPTADKMLSEEANYWLPVDKYIGGIEHAIMHLLYARFFHKLMRDQ 551

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L  +    K + + G +L  G K+SKS GN +DP E+I++ G D +R F +      + 
Sbjct: 552 GLVTSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDKYGADTVRLFSMFAAPPEQS 611

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +   G+           + N    +  ++ K+           +++D+         L
Sbjct: 612 LEWSDTGVDGA--NKFLRKVYNYAYTNKEILAKNITI---DVTKLSKNDKKARYEIYANL 666

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++   +      +  ++  + +++ ++ Y +                    V +E    L
Sbjct: 667 KQAIFDFDKSQFNTVVSACMKILNTLNNYDNLS----------------DSVKLEGFSIL 710

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
             +L  F P + + ++  + + ++
Sbjct: 711 LRILSPFTPHICHYLWQEIGLGED 734


>gi|255656594|ref|ZP_05402003.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449952|ref|ZP_06891716.1| isoleucine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878334|ref|ZP_06902342.1| isoleucine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261222|gb|EFH08053.1| isoleucine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430632|gb|EFH16471.1| isoleucine--tRNA ligase [Clostridium difficile NAP07]
          Length = 1035

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 147/438 (33%), Gaps = 68/438 (15%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                     W+      D        W +  ++ Y  +  V+   +  +      P+ +
Sbjct: 342 DETGKFTSTPWEGRFVMEDGLDVEIIKWLASENKLYSKEKVVH---NYPHCWRCQTPLVY 398

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD---- 215
             +  ++  ++  +DKL+    ++     P     +        L D ++SR  +     
Sbjct: 399 YAKPSWYIEMTKLKDKLIEN--NNGVKWFPSFVGEKRFGNWLENLNDWAISRTRYWGTPL 456

Query: 216 --WGIKIPDDPQ---------------------------------------------YIM 228
             W  +                                                    ++
Sbjct: 457 PIWRCECGHTDSVGSRAELAERAIEDVNPETVELHRPYVDDIHLKCEKCGKPMTRVTEVI 516

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+         Y      +  + +PAD    G D     F+++   +  +    P 
Sbjct: 517 DCWFDSGAMPFAQHHYPFENKENFDQLFPADYISEGIDQTRGWFYSLLAVSTFVLGKAPY 576

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +   G+K+SKS GN ++P+E+ ++ G DALR++L+          +D DGL
Sbjct: 577 KSVLVPDLVLDKDGKKMSKSRGNTVNPMELFDQYGADALRWYLLYVSPPWTPTKFDMDGL 636

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEI 401
           K+   +     + N+ +     +  + D + PT          E D  ILS  + +++++
Sbjct: 637 KEIQ-SKFIGTMKNVYNFFT--LYANTDDINPTEFFVEYKDRPELDRWILSKFNNLMKDV 693

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            EN+    +++ L  +   +++   + Y    +         +    V   T E++  L 
Sbjct: 694 EENLAIFELNKTLRMIQDFINDDLSNWYIRRSRRRFWATELTEDKKAVYNTTYELLHGLC 753

Query: 460 ILLQAFVPKLANKIFDIL 477
             +  F P ++ +++  L
Sbjct: 754 RAIAPFAPYMSEEMYRNL 771



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 51/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N  P + H     + D + R+  + G  V    G D HG  +   
Sbjct: 37  KDDPSFVFYEGPPTANGNPGVHHVLSRTLKDSVCRYKTMSGYQVKRKAGWDTHGLPVEIQ 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRH 102
            +                       +  V    + +R M +    ++  D+   T +  +
Sbjct: 97  VEKELGLTSKQQIEEYGIAEFNQKCRESVFSFEKQWRIMTERMAYEVDLDNPYITLDNNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +  K + +G IY+G     Y  R        EV +G  
Sbjct: 157 IESVWWILNKFNKEGYIYEGHKILPYCPRCGTGLASHEVAQGYK 200


>gi|119470852|ref|ZP_01613463.1| leucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446079|gb|EAW27358.1| leucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 862

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R+    L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRNQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y  +LL  
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEQKEIPQWFIKITDYAQELLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +   ++   ++           GL
Sbjct: 206 LDKLDDWPEQVKTMQRNWIGRSEGL 230



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 75/189 (39%), Gaps = 27/189 (14%)

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N IDP +VI + G D +R F++      +   +   G++         G    + R   
Sbjct: 628 NNGIDPQQVIAQYGADTVRLFMMFTAPPEQTLEWSDSGVE---------GAHRFLKRVWK 678

Query: 368 MI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
               +K          A T   + +     + + ++ ++++ +   + A+A ++ L +  
Sbjct: 679 YAVDVKAAGYQALEKSALTNPQKVLRRELHKAIAKVSDDVERRQTFNTAIAAIMELSN-- 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
                     +L K   + A  +  +  E +  L I+L    P L++++++ L    +  
Sbjct: 737 ----------KLIKAPLNDAQDI-AIANEALEALIIMLAPITPHLSHELWEELGKDGDIL 785

Query: 483 NRCFQSLDQ 491
           +  + ++D+
Sbjct: 786 DAAWPTVDE 794


>gi|126700232|ref|YP_001089129.1| isoleucyl-tRNA synthetase [Clostridium difficile 630]
 gi|254976207|ref|ZP_05272679.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093594|ref|ZP_05323072.1| isoleucyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255101782|ref|ZP_05330759.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307650|ref|ZP_05351821.1| isoleucyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255315342|ref|ZP_05356925.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518007|ref|ZP_05385683.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651123|ref|ZP_05398025.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684189|ref|YP_003215474.1| isoleucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687848|ref|YP_003218982.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520975|ref|ZP_07407322.1| isoleucyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115251669|emb|CAJ69504.1| Isoleucyl-tRNA synthetase [Clostridium difficile]
 gi|260210352|emb|CBA64706.1| isoleucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213865|emb|CBE05876.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 1035

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 147/438 (33%), Gaps = 68/438 (15%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                     W+      D        W +  ++ Y  +  V+   +  +      P+ +
Sbjct: 342 DETGKFTSTPWEGRFVMEDGLDVEIIKWLASENKLYSKEKVVH---NYPHCWRCQTPLVY 398

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD---- 215
             +  ++  ++  +DKL+    ++     P     +        L D ++SR  +     
Sbjct: 399 YAKPSWYIEMTKLKDKLIEN--NNGVKWFPSFVGEKRFGNWLENLNDWAISRTRYWGTPL 456

Query: 216 --WGIKIPDDPQ---------------------------------------------YIM 228
             W  +                                                    ++
Sbjct: 457 PIWRCECGHTDSVGSRAELAEKAIEDVNPETVELHRPYVDDIHLKCEKCGKPMTRVTEVI 516

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+         Y      +  + +PAD    G D     F+++   +  +    P 
Sbjct: 517 DCWFDSGAMPFAQHHYPFENKENFDQLFPADYISEGIDQTRGWFYSLLAVSTFVLGKAPY 576

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +   G+K+SKS GN ++P+E+ ++ G DALR++L+          +D DGL
Sbjct: 577 KSVLVPDLVLDKDGKKMSKSRGNTVNPMELFDQYGADALRWYLLYVSPPWTPTKFDMDGL 636

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEI 401
           K+   +     + N+ +     +  + D + PT          E D  ILS  + +++++
Sbjct: 637 KEIQ-SKFIGTMKNVYNFFT--LYANTDDINPTEFFVEYKDRPELDRWILSKFNNLMKDV 693

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            EN+    +++ L  +   +++   + Y    +         +    V   T E++  L 
Sbjct: 694 EENLAIFELNKTLRMIQDFINDDLSNWYIRRSRRRFWATELTEDKKAVYNTTYELLHGLC 753

Query: 460 ILLQAFVPKLANKIFDIL 477
             +  F P ++ +++  L
Sbjct: 754 RAIAPFAPYMSEEMYRNL 771



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 51/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N  P + H     + D + R+  + G  V    G D HG  +   
Sbjct: 37  KDDPSFVFYEGPPTANGNPGVHHVLSRTLKDSVCRYKTMSGYQVKRKAGWDTHGLPVEIQ 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRH 102
            +                       +  V    + +R M +    ++  D+   T +  +
Sbjct: 97  VEKELGLTSKQQIEEYGIAEFNQKCRESVFSFEKQWRIMTERMAYEVDLDNPYITLDNNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +  K + +G IY+G     Y  R        EV +G  
Sbjct: 157 IESVWWILNKFNKEGYIYEGHKILPYCPRCGTGLASHEVAQGYK 200


>gi|120602905|ref|YP_967305.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231603|sp|A1VEL2|SYL_DESVV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120563134|gb|ABM28878.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 829

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 29  DKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N  N R     L  SYD    + T    ++   ++ + +  +KG +Y
Sbjct: 89  IKNGTHPAKWTFANIDNMRSQLKRLGYSYDWQREVATCTPEYYRWEQLFFLRFLEKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +  +      +++V +G          + V+  E   +F R++ Y ++LL+  
Sbjct: 149 RKKAAQNWCPKCHTVLANEQVIEG----LCWRCDSAVEQKELTQWFLRITDYAEELLADL 204



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 102/309 (33%), Gaps = 30/309 (9%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--- 253
           +     G   L  +   ++    +           +D             +    KA   
Sbjct: 461 VKTHDDGRSPLPHTPAFYECTCPVCGGKARRETDTMDTFVESSWYFARYTDATNDKAPFT 520

Query: 254 ----KFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKG 300
               ++W P D ++ G +    H +Y             +  + P    + + G +L  G
Sbjct: 521 PDALRYWLPVDQYIGGVEHAILHLLYSRFFTKALRDCGFIELDEPFA-NLLTQGMVLMDG 579

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP E+I   G D +R F +      +D  + + G++          +  
Sbjct: 580 SKMSKSKGNVVDPTEMIARYGADTVRLFCLFAAPPERDFDWSESGIEGSYR--FVGRVWR 637

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
           LV      +L           A T     +       +++  +++      + A+A V+ 
Sbjct: 638 LVEELREHLLAVGACSSTAEDAKTPVARELRLKEHATVRKAGDDLNDRFQFNTAIAAVME 697

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           LV+ +           L K       +   V    +  +  LL  F P L+ +++ +L  
Sbjct: 698 LVNAL----------YLAKDELVADESGRKVLSSAVSTVLTLLSPFTPHLSEELWALLGH 747

Query: 480 ADENRCFQS 488
            +       
Sbjct: 748 TESVSTLPW 756


>gi|150010360|ref|YP_001305103.1| valyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256839210|ref|ZP_05544720.1| valyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|166225526|sp|A6LIG7|SYV_PARD8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|149938784|gb|ABR45481.1| valyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256740129|gb|EEU53453.1| valyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 873

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 125/374 (33%), Gaps = 56/374 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L           P + +N         +KD  +SR+   
Sbjct: 349 PIEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPPKFKNT-YRHWMENIKDWCISRQ-LW 406

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       + ++  W  +    +
Sbjct: 407 WGHRIPAYFLPEGGYVVAETEEKALELAKEKCGNPNLTMSDLRQDEDVLDTWFSSWLWPI 466

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    ++NPD  +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 467 SLFDGINNPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKMPFKSVYFTGIVR 526

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D    ++    +  N
Sbjct: 527 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMLAAPAGNDIPFDDALCEQ--GRNFNN 584

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         +   D  I  P A   + +       + + E+ ++     +  A+  
Sbjct: 585 KIWNAFRLVKGWTV---DDTIAQPEASAIAVKWFKMQLDKTIAEVDDSFSKYRLSEAMMA 641

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P     +   T E        L  LL  F+P +  +
Sbjct: 642 VYKL------FWDEFSSWYLEMVKPGYQQPIDKATYEATLGFFDALLRLLHPFMPFITEE 695

Query: 473 IFDILFVADENRCF 486
           ++  L    E    
Sbjct: 696 LWQALEPRKEGESL 709



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMMGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +++  +
Sbjct: 92  VNRLAGQGIKKTDLTRDEFLRHAWEWKEEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  +  KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFVDLYKKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|256810860|ref|YP_003128229.1| valyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794060|gb|ACV24729.1| valyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 878

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 141/392 (35%), Gaps = 15/392 (3%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +      K  I       W+    +      E+         + +   + W+E+  + 
Sbjct: 335 QNVGVCWRCKTPIEIIVTEQWFVNVRKLIPKVREIADEIKWVPQHMKIRLLNWIEDMDWD 394

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +         +      +    E    +          +     G         
Sbjct: 395 WVISRQRIFATPIPVWYCPKCGNVVVAKEEDLPIDPTKTGYVCDKC----GNTDLIPETD 450

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+    +  T +LD+ +  K K +P  L   G DI+R  A Y    +  L+   
Sbjct: 451 VLDTWMDSSITPMVITKWLDDDEFFK-KHYPVQLRPQGHDIIRTWAFYTIVKSIALTGKK 509

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +       G D  +   
Sbjct: 510 PWDEIVINGMVFGEDGHKMSKSRGNVVEPDEIIAKYGADALRLW-ASNSVIGDDVPFLWK 568

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRE 403
            +             N    +   I  D    +  P   +   D  ILS   R+++ +  
Sbjct: 569 EVD--YGYRFLRKFWNACRFAKMHISDDIIDELKKPMEISNPIDLWILSKLQRLIERVDR 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +++N   +  + ++   V     D Y +  K + L   + +      +    VI +L  L
Sbjct: 627 DLENYRFNT-IVEIYKFVWHEFCDNYIEMVK-YRLYGNDEEAKKEARWTLYYVIDKLVRL 684

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L  F P  ++ + +I  + + +  F  +D++L
Sbjct: 685 LCPFAPHFSDYMAEIYKIDNLHFSFPEVDKKL 716



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  SDKPPYIIDTPPPYPTGRLHLGHALNWTYMDIIARYKRMKGFNVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                ++N    R     L IS  +D    T    +    
Sbjct: 91  VEEIYGITKSDVDRHKFRELCIKLTEENIEKMRKQIKSLGISIDWDREYITMTPEYIKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++   G IY+G +   +  R +
Sbjct: 151 QTAFVRMYKDGLIYRGKFPVNWCPRCQ 177


>gi|297587185|ref|ZP_06945830.1| isoleucine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297575166|gb|EFH93885.1| isoleucine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 1035

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 106/267 (39%), Gaps = 10/267 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +I    + ++ VW D+         +         K +PAD    G D     F+++   
Sbjct: 508 EIMTREKDVIDVWFDSGAMPFAQQHWPFEHTDDFDKVFPADFINEGIDQTRGWFYSLLAI 567

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + +++   P    + +   +   G+K+SKS GN IDPIE+ ++ G D +R++ +      
Sbjct: 568 STMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTIDPIELFDKYGADVVRFYSLYVSPPW 627

Query: 337 KDGFYDKDGLKKRVNADLA--NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               +D  GL++  +          N      +    D              D+ ILS  
Sbjct: 628 IPTKFDVSGLQEVESKFFRSFRNTYNFFQMYATTDETDPTEYFVEYKDRAVIDKWILSKF 687

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYV 450
           + + +   ENM      +   ++ + V     + Y   + ++ W+ +  +  +  +V   
Sbjct: 688 TNLQKFYFENMDKFEYTKVAREISNFVIEDLSNWYIRRNRRRFWKTEMDDDKK--SVYNT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
           T E++  L  L+  F P +A +++  L
Sbjct: 746 TYEILVGLTKLIAPFTPFIAEEMYHDL 772



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  +          N +P I H     + D+  R+  + G  V    G D HG  +    
Sbjct: 38  EENRYVFYDGPPTANGKPGIHHVISRTLKDMTCRYKTMQGYKVYKKAGWDTHGLPVEIEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHH 103
           +                       K  V      +++M+D    ++  DD   T +  + 
Sbjct: 98  EKKLGLHDKKEIENYGVEKFNEECKKSVFSYREKWQEMSDRMAYNVDMDDPYITLDNNYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   L  K+   G IY+G     Y  R        EV +G +
Sbjct: 158 ESVWALLDKMYKDGLIYEGAKILPYCPRCGTGLASHEVAQGYE 200


>gi|262382345|ref|ZP_06075482.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301308439|ref|ZP_07214393.1| valine--tRNA ligase [Bacteroides sp. 20_3]
 gi|262295223|gb|EEY83154.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300833909|gb|EFK64525.1| valine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 873

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 127/375 (33%), Gaps = 58/375 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L    +      P + +N         +KD  +SR+   
Sbjct: 349 PIEPKLSMQWFLKMEHLAQIALEPVMNDDIKFYPPKFKNT-YRHWMENIKDWCISRQ-LW 406

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       + ++  W  +    +
Sbjct: 407 WGHRIPAYFLPEGGYVVAETEEKALELAKEKCGNPNLTMSDLRQDEDVLDTWFSSWLWPI 466

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    ++NPD  +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 467 SLFDGINNPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKMPFKSVYFTGIVR 526

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D    ++  N     
Sbjct: 527 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMLAAPAGNDIPFDDALCEQGRN----- 581

Query: 357 GIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
              N +  +  ++     D  I  P A   + +       + + E+ ++     +  A+ 
Sbjct: 582 -FNNKIWNAFRLVKGWTVDDTIAQPEASAIAVKWFKMQLDKTIAEVDDSFSKYRLSEAMM 640

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P     +   T E        L  LL  F+P +  
Sbjct: 641 AVYKL------FWDEFSSWYLEMVKPGYQQPIDKATYEATLGFFDALLRLLHPFMPFITE 694

Query: 472 KIFDILFVADENRCF 486
           +++  L    E    
Sbjct: 695 ELWQALEPRKEGESL 709



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMMGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +++  +
Sbjct: 92  VNRLAGQGIKKTDLTRDEFLRHAWEWKEEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  +  KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFVDLYKKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|227498613|ref|ZP_03928757.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904069|gb|EEH89987.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 830

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 7/228 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMRGYNVLHPMGFDSFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N  N  D    + +SY  D  ++T  + ++   +  ++ +  +G   K
Sbjct: 93  KHNIPPAKWTLENIANMEDQQKRMGLSYDWDREVKTCMEDYYKWTQWFFELMYKRGLAVK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +      +++V  G           PV   +   +FF+++ Y D+LL   +
Sbjct: 153 KTAPVNWCEKCNTVLANEQVIDGK----CWRCDTPVVKKDLSQWFFKITDYADELLKDLD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
               +  P++           GL + S         + +       +Y
Sbjct: 209 LLKGWPEPVKTMQRNWIGRSEGL-EFSFDCPDLGTKLPVYTTRPDTIY 255



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 29/280 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           +  +            D              Y                 W   D ++ G 
Sbjct: 481 VHCTCPKCGGPATRELDTMDTFVCSSWYYLRYTDPHNDQAPFSHEAVDHWMSVDQYIGGI 540

Query: 266 DILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y          A L+  + P    + + G ++  G K+SKSLGNV+ P E+I
Sbjct: 541 EHAILHLLYSRFFVKVLRDAGLVKVDEPFT-NLLTQGMVIKDGAKMSKSLGNVVSPEEII 599

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G D  R F++      ++  +   G++        N +  +V      + K      
Sbjct: 600 GKYGADTARLFIMFAAPVERELEWSDQGVEGSFR--FLNRVWRIVYHFQDELQKKV--KT 655

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                  E+   +  +    L++I E++      + A++ ++ LV+ +  Y         
Sbjct: 656 YDVKELDEAGREMRHILHVSLKKITEDLDSRFNFNTAISTMMELVNALYAY--------- 706

Query: 437 KKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFD 475
                D+A  V    + EVI  L +++  FVP +  +++ 
Sbjct: 707 ----KDKAKKVHPGLIWEVITDLLLVMAPFVPHITEELWH 742


>gi|121534787|ref|ZP_01666607.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306582|gb|EAX47504.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 826

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++ + Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 30  RQKPEYYVLEMFPYPSGHLHMGHVRNYSIGDVIARFKMMQGYNVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N  N R     L +SY  D  + T    ++   + L+     +G  
Sbjct: 90  AIKHGIHPAKWTWDNIANMRRQQQELGLSYDWDREVATCHPDYYRWTQWLFLLFYHRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +         +++V  G          + V   E E +FF+++AY D+LL  
Sbjct: 150 YKKKAAVNWCNDCNTVLANEQVVDG----RCWRCDSVVVKKELEQWFFKITAYADRLLED 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 206 LKELKGWPERVKVMQENWIGRSEG 229



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 101/264 (38%), Gaps = 27/264 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP----- 276
           D              Y +     +  + +KA +W P D ++ G +    H +Y       
Sbjct: 495 DTMDTFICSSWYYYRYTSPHSDTEAFNSAKANYWMPVDQYIGGIEHAILHLLYSRFFTKV 554

Query: 277 ---AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L++ N P  K + + G ++  G K+SKS GNV+ P E+I + G D  R F++   
Sbjct: 555 LKDAGLINVNEPF-KNLLTQGMVIKDGAKMSKSKGNVVSPEEIIGKYGADTARLFILFAA 613

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +   G++          +  +V       +         P      +  +  V
Sbjct: 614 PPERDLEWSDQGVEGAFR--FLGRLWRIVHHYAP--VAGAADESYDPAVLGPEERELRRV 669

Query: 394 CSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               ++++ E++ +    + A++ ++ LV+ +  + +              A+    +  
Sbjct: 670 LHSTIKKVTEDIGERFNFNTAISAIMELVNALYAFREQT------------AAPNPGLVR 717

Query: 453 EVIRQLAILLQAFVPKLANKIFDI 476
           E +  L  LL  F P +  ++++ 
Sbjct: 718 EALSALLRLLAPFAPHITEELWNQ 741


>gi|77166123|ref|YP_344648.1| leucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254436091|ref|ZP_05049598.1| leucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123730613|sp|Q3J7S8|SYL_NITOC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76884437|gb|ABA59118.1| leucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089202|gb|EDZ66474.1| leucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 819

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMRGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N  + R     L  +YD    + T +  ++   + L+ K+  KG +Y
Sbjct: 91  IQNRVPPAQWTYENIDHMRRQLKRLGFAYDWSRELATCQPDYYRWEQWLFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F +++AY ++LL+  
Sbjct: 151 KKTALVNWDPVDQTVLANEQVIDG----RGWRSGALVERREIPQWFLKITAYGEELLTAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   +            G+
Sbjct: 207 DGLTGWPEQVRAMQRNWIGRSEGI 230



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 96/271 (35%), Gaps = 40/271 (14%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-- 282
              + ++   Y               +  +W P D ++ G +    H +Y   F      
Sbjct: 492 FDTFFESSWYYARYCCPDNNATMVDERGDYWLPVDQYIGGIEHAVLHLLYARFFHKVMRD 551

Query: 283 ------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 + P    + + G +L  G K+SKS GN +DP  +IE  G D  R F++      
Sbjct: 552 MGLVRSDEPFT-HLLTQGMVLKDGAKMSKSKGNTVDPQALIEHYGADTARLFIMFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-----ESIL 391
           +   + + G++         G    + R   ++    +            D     +S  
Sbjct: 611 QSLEWSESGVE---------GAHRFLKRLWRIVAAHVEQDPKAALTLKVKDLNSEQKSFR 661

Query: 392 SVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +     + +  +++ +    + A+A ++ L++ + + FD   P         +   +   
Sbjct: 662 AKVHETIAKASDDIGRRYTFNTAIAAIMELMNALAK-FDDSSP---------QGQAIRQ- 710

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             E +  + +LL    P + ++++  L   +
Sbjct: 711 --EALEAVVLLLSPITPHICHRLWQELGHRE 739


>gi|290510399|ref|ZP_06549769.1| leucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289777115|gb|EFD85113.1| leucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 860

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNITYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 105/322 (32%), Gaps = 77/322 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP------- 276
              ++++   Y   T          +K    + P D+++ G +    H +Y+        
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 277 -AFLLSANLP-------------------------LPKKVFSHGFILHKGE--------- 301
            A +++++ P                             V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A +E  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTTKGDVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++            +L K  P        +  E +  +  +L  F P  + 
Sbjct: 724 TAIAAIMELMN------------KLAKA-PQEDEQDRALMQEALLAVVRMLNPFTPHASF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQ 491
            ++  L      +N  +   D+
Sbjct: 771 TLWRELNGEGDIDNAPWPVADE 792


>gi|114331418|ref|YP_747640.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313769|sp|Q0AG57|SYL_NITEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114308432|gb|ABI59675.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 868

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+ + H+GH     I DVL+R+ R+ G +V+   G D  G     AA
Sbjct: 31  DKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYRRMQGYNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    R     L   I +   + T +  ++   + L+ ++ +KG  Y
Sbjct: 91  IQKGVPPAKWTYDNIAYMRSQLQSLGLAIDWKRELATCDPEYYRWNQWLFLRMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+  ++ Y D+LL+  
Sbjct: 151 QKTQVVNWDPVDQTVLANEQVIDG----CGWRTGAVVEKREIPGYYLAITRYADELLAGL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E+ P +   ++           G
Sbjct: 207 ENLPGWPERVKAMQANWIGKSYG 229



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/439 (12%), Positives = 117/439 (26%), Gaps = 82/439 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +     +           + E          G   Q Y     P+   ++ G     
Sbjct: 390 FSSLKSMDAVDAIATKLKLEEQGEKRVRYRLRDWGISRQRYWGCPIPLVHCDQCGVVPVP 449

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                  L           P+ +                  R       +      ++  
Sbjct: 450 DDQLPVTLPEDLVPDGSGNPLTKTPSFYECT--------CPRCGQQAHRETDTMDTFVDS 501

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPL 286
            W      Y          D     + P D ++ G +    H +Y   W   +    L  
Sbjct: 502 SW--YFIRYACQDQQAAMTDQRANYWLPVDQYIGGIEHAILHLLYSRFWSKVMRDLGLVS 559

Query: 287 PKKVFSH------------------------------GFILHKGEK-------------- 302
             + F++                                   +G+K              
Sbjct: 560 FDEPFANLLTQGMVLNEIFFRKTGNGRIQYFNPVEVDVQYDAEGKKIGAVLQADGQPVES 619

Query: 303 -----ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                +SKS  N IDP E+IE+ G D  R F++      +   +   G++          
Sbjct: 620 GGIGTMSKSKNNGIDPQEIIEQYGADTARLFMMFASPPTQTLEWSDAGVEGAFR--FLKR 677

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQL-IHRALA 415
           +   V         D       P     +D   +     + + ++ ++++ +   + A+A
Sbjct: 678 LWRQVY-LHRQQGSDMSATDAIPHLEYPADLRDLRCQLHQTIVKVTDDLERRHTFNTAIA 736

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ L++++        P                +  E +    +LL   VP + + ++ 
Sbjct: 737 AVMELMNKLAG-VQDISP------------AARQLMQEALENSVLLLSPIVPHICHILWR 783

Query: 476 ILFVADE--NRCFQSLDQR 492
            L    E  ++ +   D++
Sbjct: 784 ELRPGTELLDQPWPQADEQ 802


>gi|34763278|ref|ZP_00144237.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887049|gb|EAA24161.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 862

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 5/174 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 32  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 92  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 151

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y
Sbjct: 152 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDY 202



 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 68/417 (16%), Positives = 140/417 (33%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 390 FNGLSSKDALVKIAEYVEEKSYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 449

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 450 DENLPVLLPDDIEFSGNGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 499

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 500 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 559

Query: 281 SANLPLPK------------------KVFSHGFILHKG---------------EKISKSL 307
           S+N P  +                  K      ++ KG               EK+SKS 
Sbjct: 560 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVIKGDKAYSQSGEELQVKVEKMSKSK 619

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 620 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 670

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L+
Sbjct: 671 LVFENSELVKNANDEIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 730

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 731 NEVQTYVASSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 777


>gi|261819783|ref|YP_003257889.1| valyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261603796|gb|ACX86282.1| valyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 951

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 89/552 (16%), Positives = 174/552 (31%), Gaps = 105/552 (19%)

Query: 36  RFHRLDGLDVLFT--------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           R+  L G +V+           G +    +         +T     +      R    ++
Sbjct: 241 RYKDLIGKEVILPLIGRRIPIVGDEHADMEKGTGCVK--ITPAHDFNDYEVGKRHQLPMV 298

Query: 88  DI-SYDDFIRTTEKRHH-----DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +I ++D  IR + +         T        + +G           +  DE    ++  
Sbjct: 299 NILTFDGDIRQSAEIFDTNGEASTAYSSEIPEAFQGLERFAARKALVAAFDELGLLEEIK 358

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                  Y +     ++ M  + ++ R +      +   E      +P +  N   S+++
Sbjct: 359 AHDLTVPYGDRGGVVIEPMLTDQWYVRAAVLAKPAVEAVEDGRIQFVPKQYENMYFSWMR 418

Query: 202 SGLKDLSLSRKTFDWG--IKIPDD----------------------------PQYIMYVW 231
             ++D  +SR+   WG  I    D                             + ++  W
Sbjct: 419 D-IQDWCISRQ-LWWGHRIPAWYDANGKVYVGRTEAEVRSENNLADDVVLNQDEDVLDTW 476

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------N 283
             +     +T G+ +     KA   P+ + V G DI+ F         +           
Sbjct: 477 FSSGLWTFSTLGWPEQTPDLKAFH-PSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKSQ 535

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV----------------------- 320
           +P      +      +G+K+SKS GNVIDP+++++ +                       
Sbjct: 536 VPFHTVYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIR 595

Query: 321 --------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
                         G DALR+ L    + G+D  +D   L+     +  N + N  SR V
Sbjct: 596 KRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFV 652

Query: 367 SMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
            M  +D D          + +D  IL+  +R ++  R+ +       A   +        
Sbjct: 653 LMNTEDQDCGFGAGEKVLSLADRWILAEFNRTVKAYRDALDGYRFDIAANILYEFTWNQF 712

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DIL-FV 479
            D Y +  KP  +            +  V V+  L  L    +P +   I+     L  +
Sbjct: 713 CDWYLELTKP-VMNGGTEAELRGTRHTLVTVLEALLRLAHPIIPFITETIWLRVKALKGI 771

Query: 480 ADENRCFQSLDQ 491
            D+    Q   +
Sbjct: 772 NDDTIMLQPFPE 783



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+D+  +             R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWQWKGESGGNITNQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRDVKGSMWHLRYPL 204


>gi|114778439|ref|ZP_01453284.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551283|gb|EAU53841.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 818

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE  Y      YP+   H+GH     + D +AR+ R+ G +VL   G D  G     AA
Sbjct: 31  SREPYYCLVMFPYPSGNLHMGHVRNYCLGDAVARYKRMKGYNVLHPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R     L +SYD    I T    ++   + ++ ++  KG  Y
Sbjct: 91  IKHNRPPAEWTYANIDQMRVQLKRLGLSYDWSREIATCHPDYYRWEQWMFTRLMQKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G           PV     + +F R++ Y ++LL+  
Sbjct: 151 QQDAEVNWCDPCHTVLANEQVVDG----VCWRCDTPVIRKNLKQWFIRITDYAEELLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +S   +   +           +G            +GI+   D   I     D L  
Sbjct: 207 DSLSGWPEKVVGMQRNWIGKSTG--------AEVSFGIEGSGDTLDIFTTRPDTLMG 255



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 89/265 (33%), Gaps = 41/265 (15%)

Query: 232 IDALTNYLTTTG-----YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL------ 280
               + Y+                +  ++ P D ++ G +    H +Y   +        
Sbjct: 494 FMESSWYMNRYTSPRNGEAMVDAAAMQRWAPVDQYIGGVEHAVLHLLYARFYHKLMRDAG 553

Query: 281 -----SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                       K + + G +L  G K+SKS GN +DP  +IE  G D  R F +     
Sbjct: 554 LFTSGQGGDEPFKNLLTQGMVLKDGTKMSKSKGNTVDPKAIIERFGADTARLFTLFAAPP 613

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  +   G++          +  L+ R  +    D D             + +     
Sbjct: 614 EKELEWHDAGVEGGHR--FLKRVWRLLERVDAAADGDEDAAAV---------KLMRRTIH 662

Query: 396 RVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             ++ +    ++    + A+A  + L +         KP       P   +       E 
Sbjct: 663 TTIERVTHAFEHGFAFNVAIAAQMELANA----LQDFKP-----AGPGGKAA----YREG 709

Query: 455 IRQLAILLQAFVPKLANKIFDILFV 479
           +  LAI+L  FVP  A ++ ++L +
Sbjct: 710 VEVLAIMLAPFVPHFACEMGEMLGM 734


>gi|323142861|ref|ZP_08077573.1| leucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417403|gb|EFY08025.1| leucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 863

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK Y      YP+ + H+GH     I DV+AR++RL G +V+   G D  G     A
Sbjct: 33  KNKEKYYCLVMFPYPSGRLHMGHVRNYTIGDVIARYNRLLGKNVMAPIGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    +     L ++Y  D  + T    ++   +  + ++  +G +
Sbjct: 93  AIKNHAQPSDWTYSNIEYMKRQLKALGLAYDWDREVATCRPEYYKWEQKFFGELYKRGLV 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   ++ +++AY ++LL  
Sbjct: 153 YKKVSTVNWCPHDNTVLANEQVVDG----RCWRCDSKVELREIPQWYLKITAYAEELLKD 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ++  ++   +            GL+
Sbjct: 209 IDTLTDWPERVRTMQRNWIGKSEGLQ 234



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 20/182 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP +++   G D +R F++          + + G++       AN     
Sbjct: 622 KMSKSKNNGIDPEDMVRLYGADTVRLFMMFASPAELTLEWRQSGVEG------ANRFLRK 675

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           +   V  +                +   +       + ++ +++  +   + A+A ++ L
Sbjct: 676 LWNQVYDLTSVSSFKALDKSKLNAAQRKLRHQLHTTIVKVTDDIGRRQTFNTAIASIMEL 735

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++              K+T  D   T + +  E+   + ++L    P +  K++++L   
Sbjct: 736 LNAA-----------AKETGTDE--TSIALRYEIYNAVILMLYPITPHICFKLYELLGNE 782

Query: 481 DE 482
            E
Sbjct: 783 GE 784


>gi|225175106|ref|ZP_03729102.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169282|gb|EEG78080.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 822

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++K Y+     YP+ + H+GH     I DVLARF  + G  VL   G D  G     A
Sbjct: 28  EGKKKYYVLEMFPYPSGRLHMGHMRVYSIGDVLARFLNMRGYSVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     L ISY  D  + T    ++   + L+     +G  
Sbjct: 88  AIERQVHPAEWTYANIEAMKKQQKALGISYDWDREVATCAPDYYKWTQWLFLLFYKRGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +  +      +++V  G          + V   + E +F R++ Y ++LL  
Sbjct: 148 YKKKASVNWCPQCATVLANEQVEDG----GCWRCGDEVVVKDLEQWFLRITDYAERLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +    E       G
Sbjct: 204 LKLLDGWPERVRTMQENWIGKSEG 227



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 102/269 (37%), Gaps = 34/269 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP----- 276
           D              Y       +     ++  W P D ++ G +    H +Y       
Sbjct: 492 DTMDTFICSSWYFFRYTDPKNENEAFAKDRSDAWLPVDQYIGGIEHAILHLLYSRFFTKV 551

Query: 277 ---AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A +  A  P   ++ + G +   G K+SKS GNV+ P E+IE+ G D  R F++   
Sbjct: 552 LHDAGMTEAVEPFT-RLLAQGMVNKDGAKMSKSKGNVVSPDEIIEKYGADTGRLFILFAA 610

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE---SI 390
              KD  +   G++         G    + R   ++ +  D +    G   E D+    +
Sbjct: 611 PPEKDLDWSDRGVE---------GCYRFLKRVWRLVDRYADDVRGQNGETAEYDKQDQEL 661

Query: 391 LSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                  L+++ E+++     + A++ V+  V+    Y + ++         D  +T   
Sbjct: 662 RRAAHTALKKVTEDIEERFNFNTAISAVMEAVNTAYGYMNEKE---------DHINTAAM 712

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF 478
              E +  L ++L  F P L  ++++ L 
Sbjct: 713 --AEFLEMLVLVLAPFAPHLGEEMWERLG 739


>gi|289765479|ref|ZP_06524857.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717034|gb|EFD81046.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 859

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPVIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 70/412 (16%), Positives = 139/412 (33%), Gaps = 67/412 (16%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  ++ K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLNSKEALVKIAEYVEEKGYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGSGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPLP-------------------KKVFSHGFIL--------------HKGEKISKSL 307
           S+N P                     K +FS   +                K EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVTKGDKAYSQSGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL           +  LV  +  
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRVWRLVFENSE 674

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDR 426
           ++ K  D +       ++ D+++L   ++ ++++ + ++ N   + A+A  + L++EV  
Sbjct: 675 LVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELINEVQT 732

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 733 YVASSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|256027519|ref|ZP_05441353.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 872

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 42  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 101

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N +    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 102 AAIQNGTHPVIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 161

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 162 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 218

Query: 179 YY 180
            +
Sbjct: 219 GH 220



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 70/412 (16%), Positives = 139/412 (33%), Gaps = 67/412 (16%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  ++ K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 400 FNGLNSKEALVKIAEYVEEKGYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 459

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 460 DENLPVLLPDDIEFSGSGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 509

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 510 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 569

Query: 281 SANLPLP-------------------KKVFSHGFIL--------------HKGEKISKSL 307
           S+N P                     K +FS   +                K EK+SKS 
Sbjct: 570 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVTKGDKAYSQSGEELQVKVEKMSKSK 629

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL           +  LV  +  
Sbjct: 630 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR--FLTRVWRLVFENSE 687

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDR 426
           ++ K  D +       ++ D+++L   ++ ++++ + ++ N   + A+A  + L++EV  
Sbjct: 688 LVKKSNDKI--DYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELINEVQT 745

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 746 YVASSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 787


>gi|269103494|ref|ZP_06156191.1| valyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163392|gb|EEZ41888.1| valyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 953

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 79/444 (17%), Positives = 146/444 (32%), Gaps = 91/444 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEIKDHDLQVPYGDRGGVVIEPMLTDQWYVRAAPLAKPAVEAVENGDIKFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD-------------------------- 223
             N   S+++  ++D  +SR+   WG  I    D                          
Sbjct: 409 YENMYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDNDGNVYVGRTEEEVRENNNLAPVVVL 466

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +      T G+ +N    K    P+D+ V G DI+ F         + 
Sbjct: 467 RQDDDVLDTWFSSALWTFGTQGWPENTIDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 --------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                   A +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAAKIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            + N  SR V M  +D D           + +D+ I S      +E   ++ N  +  A 
Sbjct: 644 KLWN-ASRYVLMNTEDQDCGFAAGSELEYSLADKWIESQFELAAKEFNAHIDNFRLDMAA 702

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  KP  L K +  +        + V+ +   L    +P +   
Sbjct: 703 NTLYEFIWNQFCDWYLELTKP-VLWKGSEAQQRATRRTLITVLEKTLRLAHPVLPYITET 761

Query: 473 IFDIL-----FVADENRCFQSLDQ 491
           I+  +      +  +    Q+L Q
Sbjct: 762 IWQSVKPLVDGIEGDTIMLQALPQ 785



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDAGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|289207669|ref|YP_003459735.1| valyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943300|gb|ADC70999.1| valyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 925

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 125/392 (31%), Gaps = 80/392 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + ++ +     +  +   E      +P    ++        ++D  +SR+   W
Sbjct: 349 VEPYLTDQWYVKAGPLAEPAIKAVEDGRIRFVPENW-SKTYFEWMRNIEDWCISRQ-IWW 406

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 407 GHRIPAWYDADGNVYVGRSEDEVREKHGLGAEVALEQDEDVLDTWFSSALWPFSTLGWPE 466

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +  F+P  + V G DI+ F    +         ++P  +   +      +G+K+S
Sbjct: 467 KTPELRD-FYPTSVLVTGFDIIFFWVARMIMMGEHFMGDVPFREVYVTGLIRDSEGQKMS 525

Query: 305 KSLGNVIDPIEV-------------------------------------IEEVGVDALRY 327
           KS GNVIDPI++                                         G DALR+
Sbjct: 526 KSKGNVIDPIDLIDGISADDLVAKRTQGLMQPQMAKKIEKSTRKAFPDGFPAFGTDALRF 585

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TE 385
            L      G+D  +D   ++     +  N + N  SR V M ++ +D       A   T 
Sbjct: 586 TLAALATTGRDIKFDLGRIEG--YRNFCNKLWN-ASRFVLMNVEGHDCSAAADTAEHRTL 642

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D  IL   +       + +       A   +         D Y +  KP    +  PD 
Sbjct: 643 ADRWILDRLATTAATATQQLDAYRFDLAAQTLYEFTWHDYCDWYLELTKPVLNDEATPDA 702

Query: 444 AS-TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                 +  V V+  L  LL   +P +   I+
Sbjct: 703 VKRATRHTLVTVLEALLRLLHPVMPFITESIW 734



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 22/172 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA++  + D L R+ R+ G   L+  GTD  G       +  
Sbjct: 33  NYCILLPPPNVTGTLHMGHAFQHTLMDTLIRYRRMHGDRTLWQGGTDHAGIATQMVVERQ 92

Query: 66  ----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                                 +  +     +R  R + D +D S + F  T +    + 
Sbjct: 93  LAAEGKSRHDLGREDFLKAVWEWKHESGGTITRQMRRLGDSVDWSRERF--TMDDGLSEA 150

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            R ++ ++ D+G IY+G     +        +D EV    +  +      P+
Sbjct: 151 VREVFVRLHDEGLIYRGKRLVNWDPVLHTALSDLEVLSEEESGHLWHFRYPL 202


>gi|323699090|ref|ZP_08111002.1| leucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459022|gb|EGB14887.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 833

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 6/229 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA
Sbjct: 32  SRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKTMQGFNVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  QN    R     L  SYD    I T    ++   ++ + +  +KG  Y
Sbjct: 92  IKHETHPATWTYQNIAEMRAQLKRLGYSYDWRREIATCRPEYYKWEQMFFLRFLEKGLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G            V+  + E +F R++ Y D+LL+  
Sbjct: 152 RKDSPQNWCPTCNTVLANEQVEDG----LCWRCDTEVEQKDMEQWFLRITDYADELLADL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +S            +     KS   +L+   K  D  I +       +Y
Sbjct: 208 DSLEGGWPERVLTMQRNWIGKSYGAELTFQVKDMDATIDVFTTRPDTLY 256



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 113/318 (35%), Gaps = 38/318 (11%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDP----QYIMYVWIDALTNYLTTTGYLDNPDG 250
           E     K G   L    +  +        P          + ++   Y+      +  + 
Sbjct: 467 ENAQVRKDGKSPLPTMEEFVNCTCPKCGKPARRETDTFDTFFESSWYYMRYCDPRNETEA 526

Query: 251 ---SKAKFW-PADLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHK 299
                  +W   D ++ G +    H +Y               N      + + G +L  
Sbjct: 527 LGAEHLNYWMNVDQYIGGIEHAILHLLYSRFFTKALRDCGYVTNSEPFANLLTQGMVLKD 586

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP  +I + G DA R F++      K+  +   G+      D A    
Sbjct: 587 GGKMSKSKGNVVDPNAMINQYGADATRLFILFASPPVKELEWSDQGI------DGAYRFL 640

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDES--ILSVCSRVLQEIRENMQN-QLIHRALAQ 416
           + + R V  +      M+P       +D +  +       ++    +++N    +  +A 
Sbjct: 641 SRLWRLVEELEDVLTPMMPGSHDKPANDAAKGLRFKEHDTIRRTTRDIENEFQFNTVIAA 700

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ LV+E+ +  D      LK+T+P   S+        I     LL    P +  +++  
Sbjct: 701 IMELVNELYQVKDE-----LKETDPAALSSA-------IATAVTLLSPVAPHICEELWAA 748

Query: 477 LF--VADENRCFQSLDQR 492
           L   V    + + + D++
Sbjct: 749 LGHTVHLTAQPWPTFDEK 766


>gi|323158904|gb|EFZ44915.1| leucyl-tRNA synthetase [Escherichia coli E128010]
          Length = 860

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYAIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|307243131|ref|ZP_07525305.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493491|gb|EFM65470.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 806

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y      YP+ + H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  TSKPKYYCLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMQGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   V+   N    ++   +L +SY  D  + T+   ++   + ++ +       
Sbjct: 90  AIKNNIHPHVWTMSNIEEMKEQLSMLGLSYDWDKEVATSTPEYYKWTQKIFLEFYKASLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V +G          + V+  E E ++F+ + + ++LL+ 
Sbjct: 150 YKKNSFVNWCPSCETVLANEQVVQGQ----CERCDSLVEKKELEQWYFKTTEFSEELLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +    +       G
Sbjct: 206 LDGLDGWPEKVRLMQKNWIGKSFG 229



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 127/310 (40%), Gaps = 44/310 (14%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSK 252
           + F   G   L+ S+   +        P       M  ++D+   Y+     +++     
Sbjct: 446 VEFTGKGESPLASSKTFTECSCPKCGKPARREIDTMDTFVDSSWYYMRYADNMNSDRPFD 505

Query: 253 AK----FWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKG 300
                 + P D ++ G +    H +Y   F          S + P  K + + G +L  G
Sbjct: 506 TDVVNNWLPVDQYIGGVEHAILHLLYARWFTKAFKKLGWTSHDEPF-KNLLTQGMVLMDG 564

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN + P+E++E+ G D  R F++      +D  + + G++         G   
Sbjct: 565 SKMSKSKGNTVSPVELVEKYGADTARLFILFAAPPERDLEWSEQGVE---------GCFK 615

Query: 361 LVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQV 417
            ++R   ++  L     +    G  T++D+ + +  +  L+++ E++      + A+A +
Sbjct: 616 FLNRVYRLVDELAPVAKLELEFGNLTKADKDMRAKTNNTLKKVTEDLNDKFGFNTAIAAL 675

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++++ +Y          K   DR   V+    E I+ + ++L  F P L  +++  L
Sbjct: 676 MELINDLYKY----------KELEDRNDAVIK---EAIKAVVVILAPFAPHLGEELW--L 720

Query: 478 FVADENRCFQ 487
            +  E   F 
Sbjct: 721 MIGKEASVFD 730


>gi|299139450|ref|ZP_07032625.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598719|gb|EFI54882.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 855

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 78/207 (37%), Gaps = 6/207 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y    + YP+ Q H+GH     I D LARF  + G +VL   G D  G     A
Sbjct: 40  SGKPKFYCLEMLPYPSGQLHMGHVRNYSIGDALARFMWMRGYNVLHPMGWDAFGLPAENA 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD---FIRTTEKRHHDTCRILWKKISDKGD 118
           A       + +  +N    +     + +SYD     + T    ++   + ++ K+ +   
Sbjct: 100 ALKNNTPPREWTLKNIEQMKVQMRRIGLSYDWAGTEVATCLPEYYRWNQWIFLKMVENDL 159

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +  +      +++V     G  +  +   V+  E E +F R++ Y D+LL 
Sbjct: 160 AYRKSSKVNWCPKCATVLANEQVIG---GCCWRHEDTLVEQRELEQWFLRITKYADELLD 216

Query: 179 YYESHPEFILPIERRNEVISFVKSGLK 205
             +  P +   +            G  
Sbjct: 217 GLDKLPGWPEKVRTMQRNWIGRSEGTH 243



 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 34/306 (11%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDP----QYIMYVWIDALTN---YLTTTGYLDN 247
           E I   + G   L+   +  +    +   P       M  ++D+      Y         
Sbjct: 479 EKIEITQEGGSPLAKVPEFVNTTCPVCGGPARRETDTMDTFVDSSWYFYRYTDARNSNAP 538

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSHGFILHK 299
            D  KA +W P D ++ G +    H IY   +           N    +++F+ G ++  
Sbjct: 539 FDSDKANYWFPIDQYIGGVEHAILHLIYSRFWTKVMRDLGLIKNAEPAERLFTQGMVIKD 598

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+ P E+I   G DA R + +      +D  + ++G+     +     + 
Sbjct: 599 GAKMSKSKGNVVSPDEMISRYGADATRMYALFAAPPDRDLEWQEEGVAGI--SRFLARVY 656

Query: 360 NLVSRS---VSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQ-LIHR 412
            L S+    V  + K+  G    P A    T +  ++L    + + +I E+   +   + 
Sbjct: 657 RLTSKFAPVVRELEKNAHGDEIAPSALAAQTPAGAALLRTLHQTIAKITEDFSGRWHFNT 716

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +A ++ LV+E+             +   D     +    EV  +L ++L  F P +A +
Sbjct: 717 CIAAIMILVNEI----------STAEAAMDAGDISVGTIAEVFHKLVLMLAPFAPFMAAE 766

Query: 473 IFDILF 478
           +++ + 
Sbjct: 767 LWEQMG 772


>gi|226331014|ref|ZP_03806532.1| hypothetical protein PROPEN_04944 [Proteus penneri ATCC 35198]
 gi|225201809|gb|EEG84163.1| hypothetical protein PROPEN_04944 [Proteus penneri ATCC 35198]
          Length = 606

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 97/265 (36%), Gaps = 16/265 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMQGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++    L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENINYMKNQLKKLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID--ALTNY 238
           ++  E+   ++           G            + +   DD   +     D      Y
Sbjct: 207 DTLDEWPEQVKTMQRNWIGRSEG--------VEIKFDVADSDDTMTVYTTRPDTFMGVTY 258

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI 263
           +             A+  P   H I
Sbjct: 259 VAVAAGHPLAQKKAAQNNPEVQHFI 283


>gi|257094627|ref|YP_003168268.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047151|gb|ACV36339.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 879

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+ + H+GH     I DVLARFHR+ G +VL   G D  G     AA
Sbjct: 39  KRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMLGYNVLQPMGWDAFGMPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +D  I T    ++   + L+ ++ +KG IY
Sbjct: 99  MQNNVPPAQWTYANIDYMKAQLKRLGFAIDWDREIATCRPEYYRWEQWLFTRLYEKGLIY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            ++  E   Y+ +++AY ++LL+  
Sbjct: 159 KRLGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYMQITAYAEELLADL 214

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +    +      +G
Sbjct: 215 DTLDGWPEQVRLMQKNWIGKSTG 237



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 121/374 (32%), Gaps = 56/374 (14%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E      GQ    + + +    E  ++F      D   +  +            ++ I  
Sbjct: 488 ECRCPKCGQPARRETDTMDTFVESSWYFLRYCCPDNDRAMVDERVA-YWCRGGIDQYIGG 546

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTGYLDNPDGSKAKFW 256
           ++  +  L  SR        +    +  +      L         T Y ++  G K    
Sbjct: 547 IEHAILHLLYSRFWTKLMRDLGLFGEQPLDEPFARLLTQGMVVAPTFYREDSHGKKQWIN 606

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           PAD+  +  +  R       A  L         V   G      EK+SKS  N +DP  +
Sbjct: 607 PADVDAVHDERGRASGASLRADGLP--------VVVGGI-----EKMSKSKNNGVDPQAL 653

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I++ G D  R F++      +   +   G++       A      + R V   L      
Sbjct: 654 IDQYGADTARLFIMFASPPDQSLEWSDAGVEG------AFRFLKRLWRIVFEHLSAGPVA 707

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWE 435
                A T   +++     + + ++ ++   +   + A+A V+ L   ++ Y        
Sbjct: 708 PLEATALTAELKALRRQLHQTIGKVADDYGRRKQFNTAIAAVMEL---LNAYV------R 758

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +   +    + V  V  EV+  + ++L   VP +   ++  L                KP
Sbjct: 759 IAGDS----AVVRAVRQEVLEAVTLMLSPIVPHVCEALYAAL----------------KP 798

Query: 496 GFMLHKTFDPIFPR 509
           G +   T    FP+
Sbjct: 799 GHVASSTP---FPK 809


>gi|317180884|dbj|BAJ58670.1| valyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 872

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 135/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSITHLEN--NKNFANKIFNAVSY-LKLKQEAFKDKERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +                        + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|152992964|ref|YP_001358685.1| valyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151424825|dbj|BAF72328.1| valyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 878

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 139/396 (35%), Gaps = 59/396 (14%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            +E +    E +    G  Y    N V+    + + F    +    +    +      P 
Sbjct: 332 EEEGFVEKVEEHAHQVGHCYR-CKNIVEPYISKQW-FVKKEFAKASIEKVNNGEAEFFPA 389

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------- 221
              N   +   S L+D  +SR+   WG +IP                             
Sbjct: 390 HWIN-SYNAWMSELRDWCISRQ-LWWGHQIPVMYCNDCGAEFAFDGETPTKCVKCGSENI 447

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH-- 271
              + ++  W  +     +T G+ +          +    +F+P  L + G DIL F   
Sbjct: 448 HQDEDVLDTWFSSGLWPFSTLGWGNGEAFKNEKWFEEDMKEFYPNQLLITGFDILFFWVA 507

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +      ++  LP             KGEK+SKS GNVIDP+ +IE+   DALR+ L  
Sbjct: 508 RMLMMGENITGELPFKDIYLHALVKDEKGEKMSKSKGNVIDPLVMIEKYSTDALRFTLAV 567

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               G+D    ++ L++  N    N + N  +  + +    ++ +       T     +L
Sbjct: 568 LAVQGRDIKLSEEKLEQSRN--FTNKLFN-ATNYLQLNQDTFEDL-KQENIQTPLGRYML 623

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           S  +  ++E R+ +     + A   +   +     D   +      L K + +  + +  
Sbjct: 624 SRFNLAVKETRDYIDQYRFNDAATTLYRFMWGEFCDWGIE------LSKASKESVAELGS 677

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +  E ++    LL  F+P +   ++  L   +    
Sbjct: 678 IFKESLK----LLHPFMPFITENLYQRLSGTELEES 709



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I           HIGH     + D++ R+ R+DG   L+  GTD  G      
Sbjct: 39  EEGKNFCIMMPPPNVTGHLHIGHGLTFTLQDIIVRYKRMDGFKTLWQPGTDHAGIATQNV 98

Query: 62  AQN---AGVTTKVFVDQ-----------------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +    A  TTK  + +                  ++  R +      S + F  T ++ 
Sbjct: 99  VEKQLLAEGTTKEEIGREAFLKRAWQQKDSSGNAITKQLRKLGVSPAWSRERF--TMDEG 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             +  +  +K++ D GDI +G Y   +   D A  + +  ++   G  Y+ ++
Sbjct: 157 LANAVKKSFKQMYDNGDIVRGNYMINWCTHDGALSDIEVEHEDHLGHLYHLRY 209


>gi|237742619|ref|ZP_04573100.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430267|gb|EEO40479.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 859

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 5/174 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGTHPAIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDY 199



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 68/417 (16%), Positives = 140/417 (33%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLSSKDALVKIAEYVEEKSYGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 LL           P+E  N+              +        +   D      
Sbjct: 447 DENLPVLLPDDIEFSGNGNPLETSNKFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNINLPFSKEIVDKWTPVDQYIGGVEHAVMHLLYARFFYKVLRDLGLL 556

Query: 281 SANLPLPK------------------KVFSHGFILHKG---------------EKISKSL 307
           S+N P  +                  K      ++ KG               EK+SKS 
Sbjct: 557 SSNEPFKRLLTQGMVLGPSYYSEKENKYLFSKDVVIKGDKAYSQSGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           ++ ++ + +            ++ D+++L   ++ ++++ + ++ N   + A+A  + L+
Sbjct: 668 LVFENSELVKNANDEIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y  +         N ++A+ +       ++++ I+L  FVP   ++I++ L 
Sbjct: 728 NEVQTYVASSM-------NSEQAAKI---LGYTLKKIIIMLSPFVPHFCDEIWEELG 774


>gi|153820000|ref|ZP_01972667.1| leucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509451|gb|EAZ72045.1| leucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 408

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++           G
Sbjct: 207 DNLDGWPEMVKTMQRNWIGRSEG 229


>gi|296087129|emb|CBI33503.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 126/362 (34%), Gaps = 33/362 (9%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  +   E     ++  + L  +++ 
Sbjct: 132 PERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEK 191

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           +   ++I  +P  ++  W  +     +T G+ D       KF+P  +   G DIL F   
Sbjct: 192 YGKDVEIYQEPD-VLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVLETGHDILFF--- 247

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            W A ++   +     V      LH      +G K+SK+LGNVIDPI+ I+E G DALR+
Sbjct: 248 -WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRF 306

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L    A G+D     + L    N    N + N     +  +    D          + D
Sbjct: 307 TLALGTA-GQDLNLSTERLTS--NKAFTNKLWNAGKFVLQNLPSQSDISAWETILACKFD 363

Query: 388 E------------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
           +             ++S    ++  +  +           +          D Y +A K 
Sbjct: 364 KEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIEASKA 423

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                     A  V    + V   +  +L  F+P +   ++  L    E     S  Q  
Sbjct: 424 RLYHSGGHSVAQAV---LLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSWPQTS 480

Query: 494 KP 495
            P
Sbjct: 481 LP 482


>gi|206895292|ref|YP_002246977.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737909|gb|ACI16987.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 838

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 6/208 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR++R+ G DVL   G D  G     AA
Sbjct: 45  TKPKQYVLEMFPYPSGKLHMGHVRNYSLGDVVARYNRMRGFDVLHPMGWDAFGLPAENAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +   N    R+    L  SY  D  + T    ++   + L+ K+ + G  Y
Sbjct: 105 IERGIHPENWTLSNIGYMREQMKKLGFSYDWDREVATCLPDYYKWTQWLFLKLYENGLAY 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    +    +++V  G         H+P++  E E +FF+++AY + LL+  
Sbjct: 165 KKRAKVNWCPHCKTVLANEQVIDGK----CWRCHSPIEKREIEQWFFKITAYAEDLLNDL 220

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS 208
           ++         ++   I   +  L   +
Sbjct: 221 DNLDWPEHVKAQQRNWIGRSEGALVKFA 248



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 45/305 (14%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           +  +        +   D              Y+         D   A++W P D+++ G 
Sbjct: 491 VHTTCPKCGGPARRETDTMDTFVDSSWYYLRYVDPHNEQAPFDKELAQYWMPVDIYIGGV 550

Query: 266 DILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y             ++ + P  K +F+ G +   G  +SKS GN++DP +++
Sbjct: 551 EHAVLHLLYSRFITKALKDMGYVTISEPFSK-LFTQGMVTLGGSAMSKSKGNIVDPDDIL 609

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G DA R + +      KD  + + GL+         GI   + R  +   K  D + 
Sbjct: 610 RDYGADAARMYTLFVAPPEKDFEWSQQGLE---------GIVRFIRRIWNFYCKYADEVK 660

Query: 378 PTPGA--------FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYF 428
               A         +E DE  L   +R++  + E+++ N   + A+A ++  ++EV  Y 
Sbjct: 661 EAVAAPMGKLFEGMSEYDEKALRAVNRLVYRVTEDIEDNYRFNTAIAAMMEFLNEVTDY- 719

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCF 486
                      +   +S V+   +E     A +L  FVP LA +++ +L  A     + +
Sbjct: 720 -----------DEKVSSAVMKTLLETF---AKVLAPFVPFLAEELWAMLGNAPSVHEQSW 765

Query: 487 QSLDQ 491
              D+
Sbjct: 766 PQWDE 770


>gi|300718544|ref|YP_003743347.1| Valyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299064380|emb|CAX61500.1| Valyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 951

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVEQGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGNVYVGRTEEEVRSENSLGAEVALNQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  I++  ++ ++  R+ + N     A   +         D Y +  KP  +  
Sbjct: 668 MELSLADRWIIAEFNQTVKAYRDALDNYRFDIAANILYEFTWNQFCDWYLELAKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
               +        V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEVQLRGTRNTLVNVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TRQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRKDYGRDAFIEKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              D  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSDAVKEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|330996763|ref|ZP_08320635.1| valine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329572485|gb|EGG54136.1| valine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 882

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 121/366 (33%), Gaps = 57/366 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L           P + +N         +KD  +SR+   
Sbjct: 356 PIEPKLSMQWFLKMEHLAQIALEPVMKDEIKFYPAKYKNT-YRHWMENIKDWCISRQ-LW 413

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 414 WGHRIPAYYLPQGGFVVAETAEKALELAKEKTGDTNLTASDLRQDEDALDTWFSSWLWPI 473

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    +++P   +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 474 SLFDGINHPGNEELNYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVR 533

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE  G D +R  ++     G D  +D    ++  N     
Sbjct: 534 DKLGRKMSKSLGNSPDPLDLIERYGADGVRMGMMLSAPAGNDILFDDALCEQGRN----- 588

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              N +  +  ++       I  P     +     ++     +E+ +  +   +  AL  
Sbjct: 589 -FNNKIWNAFRLVKGWQTADIAQPETAAIATRWFDAMLRTTAREVADLFKKYRLSEALMA 647

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P     +   T E        L  LL  F+P +  +
Sbjct: 648 VYKL------FWDEFSSWYLEMVKPAYGQPIDNKTYEQTLSFFDTLLKLLHPFMPFITEE 701

Query: 473 IFDILF 478
           ++  ++
Sbjct: 702 LWQHIY 707



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R+DG +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHVLNETIQDILVRRARMDGKNACWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNRLAEKGIKKTDLTREEFLKYAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  +  KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFCDLYKKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|20094335|ref|NP_614182.1| isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74560178|sp|Q8TWY2|SYI_METKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19887391|gb|AAM02112.1| Isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 1080

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 76/425 (17%), Positives = 145/425 (34%), Gaps = 56/425 (13%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY- 172
              G  ++      Y   ++ +    EV               V+W+ E     R  ++ 
Sbjct: 408 HRYGHCWRCKTPIIYRATEQWFLKVTEVKDEMLEWIER-----VEWIPEWAGHSRFKSWV 462

Query: 173 --QDKLLSYYESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQ---- 225
                     + +    LP+    E       G L +L     +   G      P     
Sbjct: 463 ENARDWCISRQRYWGIPLPVWECEECGHLEVIGSLSELEAKAVSLPPGEPDLHRPWVDEV 522

Query: 226 ---------------YIMYVWIDAL------TNYLTTTGYLDNPDGSKAKFWP------A 258
                           ++ VW+D+         Y       +     + +  P      A
Sbjct: 523 VLKCPECGSYMRRVPDVLDVWVDSGVAAWASLGYPRREDEFERWFLKEGRCDPDDPEAGA 582

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D    G D     F++      +     P    +     +  +G K+SKSLGNV+DP++V
Sbjct: 583 DFITEGHDQTRGWFYSQLGCGVVTFDTCPYRTVLMHGFTLDEEGRKMSKSLGNVVDPMDV 642

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDG 375
           +E+ G D LR++++R  A  +D  +    ++    A   N + N    + +   L ++D 
Sbjct: 643 VEKYGADTLRWYVLRSNAPWRDMHFSWQDVRDTHRA--LNVLWNAYRFTKMYSELDEFDP 700

Query: 376 MIPTPGAFTE----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF- 428
                    E     D  +LS  + +++E+ +  +   +H A   +   V       Y  
Sbjct: 701 EEHPLEDLEEHLKPEDRWLLSRINSLVEEVTDAFERYHVHEAARALYRFVTEDLSRWYIR 760

Query: 429 -DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCF 486
              ++ W L+  +P++ + V  V      +L  LL   VP +A +I+ D +   D+    
Sbjct: 761 LVRERVW-LEGDDPEKLA-VYAVLHYTFDRLVRLLAPIVPHVAERIYLDYVRAGDDPESV 818

Query: 487 QSLDQ 491
              D 
Sbjct: 819 HLTDW 823



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 23/165 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++    Y      Y +   H+G A+  II D + R+  + G  V    G D HG  I   
Sbjct: 36  RDGPLFYFLDGPPYASGSIHLGTAWNKIIKDAVNRYKLMRGYRVRLQPGWDCHGLPIEVK 95

Query: 62  AQNAGVT---------------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTT 98
            +   ++                      K F  ++     +    L +   +D+   T 
Sbjct: 96  VEQEVLSDEIECKKDIEEKVGVDKFVEKCKEFALKHVEIMTEQFKRLGVLMDWDNPYMTL 155

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  + +      K+  ++G + +      +  R E    D EV  
Sbjct: 156 DNEYIEGAWYTLKRAHERGLLDRDVRIVNWCPRCETALADHEVEY 200


>gi|261350966|ref|ZP_05976383.1| valine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860306|gb|EFC92604.1| valine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 905

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 70/356 (19%), Positives = 125/356 (35%), Gaps = 23/356 (6%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS-- 210
           + N V    +        + +       +      +P+    +    +   ++DL +   
Sbjct: 394 EMNWVPEHMKSRMINWADSMEWDWCISRQRLFATPIPVWFCKDCGKVMLPDVEDLPVDPT 453

Query: 211 ----RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
               +K    G +     + ++  W+D+  + L+  G+ +         +PA++   G D
Sbjct: 454 HDKPKKACSCGCEEFIGEEDVLDTWMDSSISPLSIAGWPNEGY---ENNFPANIRPQGHD 510

Query: 267 ILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+R  A Y       L+   P    V +       G K+SKS GNVI P EVIE+ G DA
Sbjct: 511 IIRTWAFYTTLRCLALTGKKPFDDIVINGMVFGEDGYKMSKSRGNVIAPDEVIEQYGADA 570

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAF 383
           LR +       G D  +D   +K            N   R +SM + D D         F
Sbjct: 571 LRTW-AANSVPGSDVIFDWKDIK--HGYRFLRKFWN-AFRFISMQIFDEDVSYDEIKDNF 626

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN- 440
              D  ILS  + + + +     +      +  +   +     D Y +A K + L   + 
Sbjct: 627 DPLDLWILSKLNNLNKVVDNAFADYDFATTITSIEKFIWHDFCDEYIEAVK-YRLYNDDV 685

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
                    Y    VI     LL   VP  A +++      +      +  +++ L
Sbjct: 686 SDSSRKAAKYTLRNVIETSLKLLSPIVPFFAEEVYQYFGDGESIHKTSWPEVNEDL 741



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 58/159 (36%), Gaps = 15/159 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  I T   YP    H+GH    +  D+ AR+ RL GLDVLFT G D HG       
Sbjct: 35  TKPRYIIDTPPPYPTGSIHLGHVLNWVYIDMNARYRRLKGLDVLFTQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                 QN    +D    L  S D      T    +    +
Sbjct: 95  EETHGIKKNDVSRAKFREYCIELTTQNIAKMKDQMQALGFSQDWSREFITMTPEYMKRTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             + K+ D+G IY+G +   +  R E      EV    +
Sbjct: 155 YSFLKMYDEGLIYQGIHPVNWCPRCETAIAFAEVEYSDN 193


>gi|198275860|ref|ZP_03208391.1| hypothetical protein BACPLE_02035 [Bacteroides plebeius DSM 17135]
 gi|198271489|gb|EDY95759.1| hypothetical protein BACPLE_02035 [Bacteroides plebeius DSM 17135]
          Length = 892

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 140/395 (35%), Gaps = 59/395 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 427 GHRIPAYYLPKGGFVVAETPEQALELAKEKTGDANLKMEDLRQEDDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +    ++P     F+     
Sbjct: 487 LFDGINNPGNEEIKYYYPTADLVTGPDIIFFWVARMIMAGYEYMGDMPFRNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D+   ++  N      
Sbjct: 547 KIGRKMSKSLGNSPDPLELIEQFGADGVRMGMMLAAPAGNDILFDEALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++  +E+ +      +  AL  V
Sbjct: 601 FNNKIWNAFRLVKGWQVADIEQPEYAKLATEWFDSMLAKTAEEVNDLFGKYRLSEALMAV 660

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +  VT E        L  LL  F+P +  ++
Sbjct: 661 YKL------FWDEFSSWYLEMVKPAYGQPIDKVTYEKTLAFFETLLKLLHPFMPFITEEL 714

Query: 474 FDILF--VADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  ++     E+   Q+L + +     L   F+ +
Sbjct: 715 WQHIYDRQPGESIMTQTLVKDMPYNEALIAQFEAV 749



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMMGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++    
Sbjct: 92  VNRLAQQGIKKTDLTREEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDETRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|312884628|ref|ZP_07744331.1| valyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367720|gb|EFP95269.1| valyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 952

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 82/413 (19%), Positives = 139/413 (33%), Gaps = 61/413 (14%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y     + + A     + +   V    E  YF  +   QD  +S         +P  
Sbjct: 380 DQWYVRTAPLAETATKAVEDGEIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHR-IPAW 438

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
             NE    V  G  +  +  K     + +      ++  W  +      T G+ +N D  
Sbjct: 439 YDNE--GNVYVGRTEEEVREKNNLAPVIVLRQDDDVLDTWFSSALWTFGTQGWPENTDDL 496

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKI 303
           K    P+D+ V G DI+ F         +           +P      +       G+K+
Sbjct: 497 KTFH-PSDVLVTGFDIIFFWVARMIMMTMHFCKDDNGKPQVPFKTVYVTGLIRDENGDKM 555

Query: 304 SKSLGNVIDPIEVIEE-------------------------------------VGVDALR 326
           SKS GNV+DPI++I+                                       G DALR
Sbjct: 556 SKSKGNVLDPIDMIDGIDLEALVQKRTGNMMQPKLAAKIEKNTRKTFENGIEPYGTDALR 615

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-AFTE 385
           + L    + G+D  +D   L+     +  N + N  SR V M  +D D         F+ 
Sbjct: 616 FTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEDQDCGFGDNSIEFSL 672

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDR 443
           +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L K N  +
Sbjct: 673 ADKWIESQFELAAKEFNGHIDNFRLDMAANTIYEFIWNQFCDWYLELTKP-VLWKGNEAQ 731

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
                   + V+ +   L    +P +   I+  +      +  E    Q+L Q
Sbjct: 732 QRGTRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLIKGIEGETIMLQALPQ 784



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKQAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRVERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTTKV----------FVDQNSRNFRDMAD---------VLDISYDDFIRTTEKRH 102
            +      +           F+D+      +               + +D    T +   
Sbjct: 90  VERKIAAEEEKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|317178546|dbj|BAJ56334.1| valyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 872

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 134/382 (35%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLETPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTAHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +EIR  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEIRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +                        + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLDQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|260222016|emb|CBA31159.1| Leucyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 922

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + + YP+ + H+GH     I D+LAR+ R++G +VL   G D  G     A
Sbjct: 41  KPKKKFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRMNGHNVLMPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 101 ALKNKVPPAKWTYENIAYMKGQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLEKGIA 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL +
Sbjct: 161 YRKTQVVNWDPVDQTVLANEQVIDGKG----WRTGAVVEKREIPGYYLKITDYAQELLDH 216

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   +        + V    ++ +      R  F   IK
Sbjct: 217 VQMGNDNATLTGWPDRVRLMQENWIGKSEGVRFAFTHDIK 256



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 20/197 (10%)

Query: 290 VFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
           +     I ++G   +SKS  N +DP E+I + G D  R + +          ++   ++ 
Sbjct: 657 LPVGTAIDYEGVGTMSKSKNNGVDPQELIAKYGADTARIYTMFTSPPEATLEWNDSAVEG 716

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-----ESILSVCSRVLQEIRE 403
                    + N   +  +M        +    +  + +     +++      VL+++  
Sbjct: 717 SYR--FLRRVWNFGYKLSAMDSVAARASVAGAKSLNDVEFGKEAKALRLEMHTVLKQVDF 774

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + Q    +  ++  + +++ ++ +         K  +   A       +E    L   L 
Sbjct: 775 DYQRMQYNTVVSGAMKMINALEGF---------KAMDSAGAQVA---LIEGFGILLRCLY 822

Query: 464 AFVPKLANKIFDILFVA 480
              P L++ ++  L  A
Sbjct: 823 PATPHLSHALWSELGYA 839


>gi|269792312|ref|YP_003317216.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099947|gb|ACZ18934.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 829

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I D++ARF R++G +VL+  G D  G     AA
Sbjct: 29  DKPKFYCLEMFPYPSGALHMGHLRNYSIGDLMARFLRMNGYNVLYPMGFDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N  +       +  SYD    + T    ++   + L+ +   KG  Y
Sbjct: 89  LKFGVQPAEWTWKNIEHMTGQLKKMGCSYDWRRRVETCNPDYYRWTQWLFLQFFKKGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V    DG +       V     E +F R++ Y  +LL   
Sbjct: 149 RKEAPVNWCESCKTVLANEQV---VDGGHCWRCGTAVTKRNLEQWFLRITDYAQELLDCL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S   +   +            G
Sbjct: 206 DSLEGWPERVRMMQRNWIGRSEG 228



 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 125/388 (32%), Gaps = 59/388 (15%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLS 170
            G   +   S      +E  +   EV             Y     PV + +  G      
Sbjct: 392 DGLPTREAISKMALWFEENRWGKREVNYRLRDWLISRQRYWGAPIPVVYCDCCGIVPVPE 451

Query: 171 AYQDKLLSY---YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
                 L             LP        S  K G      +            D    
Sbjct: 452 DELPVKLPMDVTVLEGGGSPLPGASHWVNTSCPKCGGPARRET------------DTMDT 499

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN--- 283
                     Y + +      D     +W P D ++ G +    H IY   F    +   
Sbjct: 500 FICSSWYFLRYTSPSSKDAPFDFDDVSYWMPVDQYIGGIEHACLHLIYARFFTKVCSDLG 559

Query: 284 ------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                       + + G ++  G K+SKS GNV+DP E+I   G D  R F++      K
Sbjct: 560 LLPKDLREPFTNLLTQGMVIKDGSKMSKSKGNVVDPDEIIRRYGADTARLFILFAAPPEK 619

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSV- 393
           D  +   G++         G    +SR   ++ ++ +G++  P         D+++  V 
Sbjct: 620 DLDWSDKGVE---------GAHRFLSRVFRLVEENLEGLMSAPSPMDVDSIGDKALRDVK 670

Query: 394 --CSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
               R + ++  ++   +  + A+A ++ L +       + KP     ++P+       V
Sbjct: 671 RQIHRTIDKVTRDISKERQFNTAVASLMELCNS----LQSLKP-----SSPEG----WSV 717

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
             E +  L + L  F P +  +++ +L 
Sbjct: 718 LREGVESLVLCLAPFTPHVCEELWSMLG 745


>gi|169832008|ref|YP_001717990.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|238688343|sp|B1I5R7|SYL_DESAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169638852|gb|ACA60358.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 826

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y      YP+   H+GH     I DV+ARF  + G DVL   G D  G     A
Sbjct: 30  SNRPKYYCLEMFPYPSGNLHMGHVRNYAIGDVVARFKTMRGYDVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    R    +L +SYD    + T    ++   + L+ +   +G  
Sbjct: 90  AIQHGVPPARWTWDNINVMRTQLKLLGVSYDWRRELATCHPGYYRWTQWLFLQFYHRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G            V+  E E +FFR++AY D+LL  
Sbjct: 150 YKAKAPVNWCPSCATVLANEQVVAG----GCERCKTAVERRELEQWFFRITAYADRLLKD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
               P +   ++   E      +G
Sbjct: 206 LAKLPGWPEKVKVMQENWIGRSTG 229



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 95/256 (37%), Gaps = 23/256 (8%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-- 252
           E ++F  +G   L+ S    +        P       +D             +P      
Sbjct: 459 EDVAFKPTGRSPLTESPDFVNTTCPTCGGPARRETDTMDTFMCSSWYYFRFTSPREENGP 518

Query: 253 ------AKFWPADLHVIGKDILRFHAIY---WPAFLLSANL----PLPKKVFSHGFILHK 299
                  ++ P D ++ G +    H +Y   +   L    L         + + G +L  
Sbjct: 519 WGLERVDRWLPVDQYIGGVEHAILHLMYSRFFTKVLYDMGLVKVQEPFTNLLTQGMVLKD 578

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+ P +++   G D  R F++      +D  +   G++            
Sbjct: 579 GAKMSKSKGNVVSPEDILNRYGADTTRLFVLFAAPPERDLEWSDQGVEG------CYRFL 632

Query: 360 NLVSRSVSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
             V R V+ +  +  G  P P A     + S+  +  + ++++ E+++     + A++  
Sbjct: 633 QRVWRLVNSVADEIRGAAPVPSANLVGVNRSMRRLTHQTIKKVTEDIETRFNFNTAISAA 692

Query: 418 ISLVSEVDRYFDAQKP 433
           + LV+ +  + D   P
Sbjct: 693 MELVNGMYHFRDRVAP 708


>gi|225449768|ref|XP_002270806.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1099

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 126/362 (34%), Gaps = 33/362 (9%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  +   E     ++  + L  +++ 
Sbjct: 578 PERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEK 637

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           +   ++I  +P  ++  W  +     +T G+ D       KF+P  +   G DIL F   
Sbjct: 638 YGKDVEIYQEPD-VLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVLETGHDILFF--- 693

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            W A ++   +     V      LH      +G K+SK+LGNVIDPI+ I+E G DALR+
Sbjct: 694 -WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRF 752

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L    A G+D     + L    N    N + N     +  +    D          + D
Sbjct: 753 TLALGTA-GQDLNLSTERLTS--NKAFTNKLWNAGKFVLQNLPSQSDISAWETILACKFD 809

Query: 388 E------------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
           +             ++S    ++  +  +           +          D Y +A K 
Sbjct: 810 KEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIEASKA 869

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                     A  V    + V   +  +L  F+P +   ++  L    E     S  Q  
Sbjct: 870 RLYHSGGHSVAQAV---LLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSWPQTS 926

Query: 494 KP 495
            P
Sbjct: 927 LP 928



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   IS          H+GHA  + + D++ R+HR+ G   L+  GTD  G       + 
Sbjct: 232 DPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTLWIPGTDHAGIATQLVVER 291

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
              +                   + ++      +    L  S D      T +++     
Sbjct: 292 MLASEGIKRAELSRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTREHFTLDEKLSWAV 351

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ ++G IY+G Y   +S   +   +D EV  
Sbjct: 352 IEAFVRLHERGLIYQGSYMVNWSPNLQTAVSDLEVEY 388


>gi|332174449|gb|AEE23703.1| leucyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 870

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK Y  +   YP+ + H+GH     I DV++RF R++G +VL   G D  G     A
Sbjct: 31  EDKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRMNGKNVLQPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  QN    ++    L   Y  D  + T +K ++   +  + ++ +KG +
Sbjct: 91  ALNNNTAPAKWTYQNIDYMKNQLKSLGFGYDWDREVATCKKEYYRWEQWFFTRLYEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 151 YKKNSTVNWDPVDHTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYAEELLAD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E   ++   +    +       G
Sbjct: 207 LEQLEDWPEQVRAMQKNWIGRSEG 230



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/346 (19%), Positives = 126/346 (36%), Gaps = 55/346 (15%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW-- 216
           +ME   Y+ R  + Q++      +   + LP++   + I  ++  +  L  SR       
Sbjct: 499 FMESSWYYARYCSAQNQDAMLDPAQANYWLPVD---QYIGGIEHAILHLLYSRFFHKLLR 555

Query: 217 --GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
             G+   D+P   +      L      + Y ++ +G K  F PAD+    KD        
Sbjct: 556 DEGLVSSDEPYKRLLCQGMVL----ADSFYREDENGKKEWFSPADVD-TEKDE------- 603

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               +  A L    K   HG +     K+SKS  N IDP  VI+  G D +R F +    
Sbjct: 604 -KGRITLATLRSDGKPVEHGGMT----KMSKSKNNGIDPQHVIDLYGADTIRVFTMFAAP 658

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PTPGAFTESDE 388
             +   +   G++         G    + R   +     D +           A T   +
Sbjct: 659 PEQTLEWVDSGVE---------GANRFIKRVWKLTQDHIDVLNGKAAPEIDKAALTSEQK 709

Query: 389 SILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           ++     R + ++ +++  +   + A+A ++ L++             L+K   D A   
Sbjct: 710 TLRRAVHRTIAKVTDDVGRRQTFNTAVAAIMELLN------------SLQKAPQDSAQD- 756

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQ 491
             V  E I  + +LL    P + + ++  L      E   +  +D+
Sbjct: 757 KAVMHEAIESVVLLLNPIAPHMCHVLWHDLGHTTDIETAAWPEVDE 802


>gi|110801907|ref|YP_699797.1| isoleucyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110682408|gb|ABG85778.1| isoleucine--tRNA ligase [Clostridium perfringens SM101]
          Length = 1039

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 135/434 (31%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L +++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDNFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRSRYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|70728445|ref|YP_258194.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|90101545|sp|Q4KHT9|SYV_PSEF5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68342744|gb|AAY90350.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 948

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 124/401 (30%), Gaps = 89/401 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDESGKVYVGRDEAEVRAKHNLGPDVALQQDNDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTDFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTTGLMQPKLQKAIEKQTRAEFADGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+        G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLATTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +R        V V+     L   F+P +  +I+  L
Sbjct: 722 ENSPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQIE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGFLWNLKYPL 201


>gi|84622414|ref|YP_449786.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123752817|sp|Q2P7G5|SYV_XANOM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|84366354|dbj|BAE67512.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 980

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 139/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 408 IEPYLTDQWFVKMDALAKRGLELVESGQIQFVPPNWINT-YRHWMENIQDWCISRQ-LWW 465

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     +V                            W  +     +T G+ D
Sbjct: 466 GHRIPAWFDDAGHCHVGHDEAEVRAKHGLGAEIALHQDSDVLETWFSSQLWPFSTLGWPD 525

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +   +    A++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 526 SQAMAERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 585

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 586 KMSKSKGNVLDPLDIIDGISIEDLVAKRTNGLMQPRMAEKIEKATRKEFPDGIIAHGADA 645

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 646 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 699

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +V  E   +  N         +         D + +  KP  L   +
Sbjct: 700 RTEAEKWILARLDKVTAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNNQD 758

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       Q   Q
Sbjct: 759 TDAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVVPRLGITTATISLQRFPQ 813



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+           R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDSLGREGFIAKVWEWNAASGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|58580454|ref|YP_199470.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188578611|ref|YP_001915540.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|81311975|sp|Q5H4N5|SYV_XANOR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|254783561|sp|B2SPF0|SYV_XANOP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58425048|gb|AAW74085.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188523063|gb|ACD61008.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 980

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 139/415 (33%), Gaps = 89/415 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 408 IEPYLTDQWFVKMDALAKRGLELVESGQIQFVPPNWINT-YRHWMENIQDWCISRQ-LWW 465

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     +V                            W  +     +T G+ D
Sbjct: 466 GHRIPAWFDDAGHCHVGHDEAEVRAKHGLGAEIALHQDSDVLETWFSSQLWPFSTLGWPD 525

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +   +    A++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 526 SQAMAERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 585

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 586 KMSKSKGNVLDPLDIIDGISIEDLVAKRTNGLMQPRMAEKIEKATRKEFPDGIIAHGADA 645

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 646 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 699

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            TE+++ IL+   +V  E   +  N         +         D + +  KP  L   +
Sbjct: 700 RTEAEKWILARLDKVTAETHAHYANYRFDLLAQSLYEFAWNAFCDWFVELAKP-ALNNQD 758

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            D A++  +  + V+  L  LL    P +  +++      L +       Q   Q
Sbjct: 759 TDAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVVPRLGITTATISLQRFPQ 813



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDSLGREGFIAKVWEWKAASGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|294083997|ref|YP_003550754.1| Valyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663569|gb|ADE38670.1| Valyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 892

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 134/380 (35%), Gaps = 49/380 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          +   E      +P  R ++        ++   +SR+   W
Sbjct: 358 IEPWLMDQWYVNAEELAKPAIKAVEEGRTKFVPE-RWDKTYFEWMRNIQPWCISRQ-LWW 415

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 416 GHRIPAWYGPDGHPFVEENEADAFASAKAHYGKDVELNRDEDVLDTWFSSGLWPFSTLGW 475

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHA---IYWPAFLLSANLPLPKKVFSHGFILHKGE 301
            ++ D  K +++P D+ V G DI+ F     +      +   +P  +          KG+
Sbjct: 476 PEDNDLVK-RYYPGDVLVTGFDIIFFWVARMMMMSMHFMDGEVPFREVYIHALVRDEKGQ 534

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVIDP+ +I++ G D LR+ L    A G+D       L+     + A  I N 
Sbjct: 535 KMSKSKGNVIDPLGIIDQYGADPLRFTLAAMAAQGRDIKMSIPRLEG--YRNFATKIWN- 591

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R + M     D  I    A    ++ I+S  +  +++  + ++    + A   +   +
Sbjct: 592 ACRFLEMNGCIIDKDIKVEDAKQSINKWIISEFNNTIEKTSKAIEAYRFNEAADVLYQFM 651

Query: 422 SE--VDRYFDAQKPWELKKTNPDRAS------TVLYVTVEVIRQLAILLQAFVPKLANKI 473
                D Y +  KP  +   +   A               ++     LL  F+P L  ++
Sbjct: 652 WHSYCDWYVELIKPTLMNSKDNADAGDDQATLETKATASAILAGTLRLLHPFMPYLTEEL 711

Query: 474 FDILFVADENRCFQSLDQRL 493
            + +F +++     S  +  
Sbjct: 712 NEKIFNSNDMLIGASWPKAF 731



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 53/176 (30%), Gaps = 18/176 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L R+HR+ G D L+  GTD  G       +  
Sbjct: 39  PYTIMMPPPNVTGSLHMGHALTFTLQDLLIRYHRMIGRDTLWQPGTDHAGIATQMVVERK 98

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 +  ++    ++    L  S D      T +    +   
Sbjct: 99  LAAENVNRRDLGRDAFIEKVWEWKAESGGMIQNQLKRLGASPDWSRERFTMDDGLSEAVI 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  +   G IY+      +  +     +D EV +             ++  E+E
Sbjct: 159 KTFVSLHRDGLIYRDKRLVNWDPKLMTAISDLEVEQRDGENPMWHLRYRIEGTEDE 214


>gi|37525270|ref|NP_928614.1| leucyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|48428523|sp|Q7N755|SYL_PHOLL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|36784697|emb|CAE13597.1| leucine-tRNA synthetase (leucine--tRNA ligase) (LEURS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 860

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +           +D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIEYMKGQLKTLGFGYDWDREVTTCTPEYYHWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V  G          + V+  E   +F +++ Y ++LLS  
Sbjct: 151 KKTSSVNWCPHDLTVLANEQVVDG----CCWRCDSKVERKEIPQWFIKITDYAEELLSDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E+  E+   ++           G
Sbjct: 207 ETLEEWPEQVKTMQRNWIGRSEG 229



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 74/195 (37%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + +  ++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V                 T   + +     + + ++ +++  +   + A+A V+ 
Sbjct: 672 RVWRLVYEHSSKGATQPLDITNLTVEQKDLFRDLHKTIAKVTDDVGRRQAFNTAIAAVME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P   ++T  DRA     +  E +  +  +L    P     ++  L  
Sbjct: 732 LMNKLTR-----AP---QETEQDRA-----LMQEALLAVVRMLSPITPHACFIMWQALGG 778

Query: 480 AD--ENRCFQSLDQR 492
               +   +   +++
Sbjct: 779 EGGIDTADWPQANEQ 793


>gi|29349761|ref|NP_813264.1| valyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81442841|sp|Q89ZM4|SYV_BACTN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29341671|gb|AAO79458.1| valyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 879

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 126/364 (34%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAALTMDDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               +++P   + + ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINHPGNEEISYYYPTSDLVTGPDIIFFWVARMIMVGYEYEGKMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             + +  +  +I     D  I    A   +     S  + V  E+ +      +  AL  
Sbjct: 584 FCSKIWNAFRLIKGWTVDDNIQASDAAKLAVHWFESKQNEVAAEVADLFSKYRLSEALMA 643

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V  L  +     Y +  KP        DR  T    T+  +  L  LL  F+P +  +++
Sbjct: 644 VYKLFWDEFSSWYLEMIKP--AYGQGIDR--TTYSATLCFLDNLLHLLHPFMPFITEELW 699

Query: 475 DILF 478
             ++
Sbjct: 700 QQMY 703



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++    
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLFYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNAW 240


>gi|161505037|ref|YP_001572149.1| valyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160866384|gb|ABX23007.1| hypothetical protein SARI_03168 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 951

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDAGNVYVGRSEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYRDALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              +      +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEEELRGTRHTLVTVLESLLRLAHPIIPFITETIWQRVKV 767



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 23/172 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +      +           F+D+  +             R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITHQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              +  + ++ ++  +  IY+G     +  +     +D EV           
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWH 199


>gi|153827452|ref|ZP_01980119.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149738629|gb|EDM52982.1| leucyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 405

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L   YD      T    ++   +  + K+  KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G           PV+  E   +F +++AY  +LL   
Sbjct: 151 KKTSSVNWCPNDQTVLANEQVEDG----CCWRCDTPVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S   +   ++           G
Sbjct: 207 DSLDGWPEMVKTMQRNWIGRSEG 229


>gi|119385062|ref|YP_916118.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119374829|gb|ABL70422.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 1030

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/294 (22%), Positives = 112/294 (38%), Gaps = 17/294 (5%)

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
            GL D +L++        +  D   ++  W  +    + T G+ ++      K++P  + 
Sbjct: 583 QGLADYNLTQDPTRLVYPVWRDAD-VLDTWFSSGLWPIGTLGWPEDTT-ELRKYFPTSVL 640

Query: 262 VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           V G DI+ F    +      +   +P             KG K+SKS GNVIDP+ +I+E
Sbjct: 641 VTGFDIIFFWVARMMMMQLAVVGQVPFRTVYVHGLVRDEKGAKMSKSKGNVIDPLTLIDE 700

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+ L    A G+D       ++   N +    I N  +R   M      G  P 
Sbjct: 701 YGADALRFTLTSMAAMGRDPKLGPKHVEA--NRNFVTKIWN-ATRFAEMNGVRGGGARPE 757

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
           P      +  I+   +R+ Q   E ++    + A   + + V     D Y +  KP    
Sbjct: 758 PQHV--VNRWIIGELARIRQATDEALETFRFNDAATGLYAFVWGKVCDWYVEFSKPLF-- 813

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             + +           V+ Q   LL   +P +  +++ +    D  R     D 
Sbjct: 814 --DGEYREETQATMGWVLDQCYTLLHPIMPFVTEELWAL--TGDRERMLVHGDW 863



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 58/193 (30%), Gaps = 29/193 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           HIGHA    + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 37  ESFSVVIPPPNVTGSLHIGHALNNTLQDILVRWHRMRGFDTLWQPGQDHAGIATQMVVER 96

Query: 65  AGVTTKV---------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEK--- 100
                +                +  +           + +    D S + F  +      
Sbjct: 97  RMAERQEPGRRDIGREAFLQKVWAWKQESGDTIIEQLKRLGASCDWSRNAFTMSGAPGAP 156

Query: 101 -----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++  + DKG IY+G     +    E   +D EV       +      
Sbjct: 157 AGEEGNFHDAVIKVFVDMYDKGLIYRGKRLVNWDPHFETAISDLEVENREVPGHMWHFKY 216

Query: 156 PVQWMEEEGYFFR 168
           P+   E   Y  R
Sbjct: 217 PLAGGETYEYVER 229


>gi|15642942|ref|NP_227983.1| leucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919980|sp|Q9WY15|SYL_THEMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4980663|gb|AAD35261.1|AE001702_1 leucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 824

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 89  AIEKGIHPEEWTRKNIATIRQQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 149 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 205 LDKLTGWPEHVKTMQRNWIGKSTG 228



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 427 QRYWGAPIPIIYCEKCGVVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKKTKCPVCGG 486

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 487 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 537

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 538 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 596

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 597 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FVKRLWNTFYTVLPFVKEENTENLV 654

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 655 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 711

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 712 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 742


>gi|288937436|ref|YP_003441495.1| valyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288892145|gb|ADC60463.1| valyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 951

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWILAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|217032547|ref|ZP_03438037.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298735844|ref|YP_003728369.1| valyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216945752|gb|EEC24376.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298355033|emb|CBI65905.1| valyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 872

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 75/382 (19%), Positives = 132/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KEDALLEKIEEHAHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  +  
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLNEYQTPLGRYAKSRLNSA 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+L R+ R+DG   L+  G D  G    
Sbjct: 35  IQEKGKRFCLMMPPPNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +   ++                   + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLSQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|189345949|ref|YP_001942478.1| valyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189340096|gb|ACD89499.1| valyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 904

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 127/365 (34%), Gaps = 48/365 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F R+    ++ L           P    N         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVRMKPLAERALQVVNDKEIRFHPPHWINT-YRHWMENIQDWCISRQ-LWW 420

Query: 217 G--IKIPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +    LTT G+     
Sbjct: 421 GHRIPAWYDSDGRVWVASSYEEACHLAGTDKLVQDDDVLDTWFSSWLWPLTTLGWTGPHS 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P D  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 481 DNDDLRAFYPTDTLVTGPDIIFFWVARMIMAGLYFKGDVPFRDVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ ++     G+D  + ++  +  +  + A  + N     
Sbjct: 541 SLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEEKCE--LGRNFATKLWNASRLV 598

Query: 366 VSMILKDYDGMIPTPGAFT-----------ESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                K +D +     A++             +  + +    +L           ++  +
Sbjct: 599 FMQREKWFDSLEEFESAYSGFSPDRMTFAFAEEHVLTARYHSMLDRYHTAFGQFRVNDIV 658

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y +A K +    ++ D A   + ++V V+      L   +P + ++
Sbjct: 659 RNVYEFFWGDFCDWYLEALKIYLSGISDADAARKAVLLSVYVLDGTLKALHPVMPFITDE 718

Query: 473 IFDIL 477
           I+  +
Sbjct: 719 IWHFI 723



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +            +GH     + D+  R+ R+ G + L+  GTD  G      
Sbjct: 44  EGKTPYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYSRMTGKEALWLPGTDHAGIATQTV 103

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++           L IS D    + T + R  
Sbjct: 104 VEKKLRKEGISRHDLGRKAFLDHVWRWREEYGGLILRQLRRLGISCDWRRNLFTMDDRAS 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     +  +   G IY+G     +    +   +D+EV  
Sbjct: 164 EAVINAFIALYRDGLIYRGTRIINWCPVSQTALSDEEVIM 203


>gi|325479054|gb|EGC82154.1| isoleucine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 1037

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 68/457 (14%), Positives = 154/457 (33%), Gaps = 29/457 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQ-NAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
           +       + F    D  G       +      T   + ++ +    + +   I ++   
Sbjct: 332 YQIGRKYGLAFVQPVDLEGNFTTTPWKGEFIFDTNEKIWRHLQEEGKVFNKQTIEHNYPH 391

Query: 96  --RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             R      +      + ++S   D      +       ++ D+ + N  E  K      
Sbjct: 392 CWRCHTPLVYYAKPSWYIEMSKFSDAMVKNNESVNWFPQTIGDKRFGNWIENVKDWAISR 451

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 P+   + +      +    K L                +E I   +  + ++S+
Sbjct: 452 SRYWGTPLNIWKCDDCDHTDTVGSRKELKERAIED--------ISEDIELHRPYVDNVSI 503

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                   +    D   ++ VW D+         Y          ++PAD    G D   
Sbjct: 504 KCDKCGGTMHRVSD---VIDVWFDSGAMPFAQLHYPFEHKDDFEDYFPADFISEGIDQTR 560

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + + +   P    + +   +   G+K+SKS GN +DP E+ ++ G DA+R+
Sbjct: 561 GWFYSLMAISTITTGKAPYKNVLVNDLVVDKNGQKMSKSKGNTLDPFELFDKYGADAVRF 620

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLA---NGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           + +          +D+ GL +  N       N        + +  L   D    T     
Sbjct: 621 YSLYVSPPWMQTKFDEKGLIEVKNNFFRTFENVYNFFGLYANTDNLSATDIKEFTDIELE 680

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTN 440
           + D  + S  + ++++  E+M+    ++ +  +   V     + Y   + ++ W    T 
Sbjct: 681 KIDRWLYSKLNTLIKDYTESMEVFDYNKVVHMISDFVVEDLSNWYIRRNRKRFWNSDLTA 740

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +A  V   T + I  ++ L+    P +A +++  L
Sbjct: 741 SKKA--VYKTTYDAILTISKLIAPITPFIAEEVYRSL 775



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 58/165 (35%), Gaps = 19/165 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E+  I       N +P I H     + D+ +R+  + G  VL   G D HG  +   
Sbjct: 37  KDAEEYIIFDGPPTANGKPGIHHVIARTLKDMTSRYKNMKGYKVLKKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRH 102
            +                       K  V + S  +R+M+D +   Y  DD   T +  +
Sbjct: 97  VEKTLGFHDKNDIEEYGIEKFNQLCKESVWKYSDQWREMSDRMAYLYNMDDPYITMDNDY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +T   L  K    G IY+G     Y  R        EV +G   
Sbjct: 157 IETEWYLLDKAFKNGYIYEGAKVMPYCPRCGTGLASHEVAQGYQM 201


>gi|315651317|ref|ZP_07904344.1| isoleucyl-tRNA synthetase [Eubacterium saburreum DSM 3986]
 gi|315486416|gb|EFU76771.1| isoleucyl-tRNA synthetase [Eubacterium saburreum DSM 3986]
          Length = 1063

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/456 (12%), Positives = 139/456 (30%), Gaps = 14/456 (3%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              ++ F    D  G               VFV    +      +     +D  +     
Sbjct: 356 RNYNLPFVQLVDAQG-----NLTKETKWAGVFVKDADKLILKDLEENGKLFDAPVFEHSY 410

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            H   C       + +    K        +R+    N      G  G++ +   N   W 
Sbjct: 411 PHCWRCNTPLIYYARESWYIKMTAVKEDIIRNNNTINWIPESIG-KGRFGDWLENIQDWA 469

Query: 161 EEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                ++      +       +       L    +N   +         +++    + G 
Sbjct: 470 VSRNRYWGTPLNVWVCDCGHMHSIGSIEELKSMSKNCPDNIELHRPYIDAVTITCPECGK 529

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++   P+ ++  W D+ +       Y           +PAD      D     F+++   
Sbjct: 530 EMRRTPE-VLDAWFDSGSMPFAQHHYPFENHEKFEAQFPADFISEAVDQTRGWFYSLLAI 588

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + L+    P    +         G+K+SKS GN +DP++ + + G DA+R++     A  
Sbjct: 589 STLIFNKAPYKNVIVMGHVQDEDGQKMSKSKGNAVDPMDALNKFGADAIRWYFYVNSAPW 648

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVC 394
               +    +++     L           +   + ++D           +  D  +LS  
Sbjct: 649 LPNRFHDKAVEEGQRKFLGTLWNTYAFYVLYADIDNFDPTKYSLDYDKLSVMDRWLLSKL 708

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + +++ + + + N  I      + S   ++ + Y    +     K               
Sbjct: 709 NTLVKTVDDYLSNYKITETARALQSFTDDMSNWYVRRCRERFWAKGMEQDKINAYMTLYT 768

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+ +    +P +  +I+  L  + +    +S+
Sbjct: 769 ALITLSKVSAPMIPFMTEEIYQNLVRSVDKNAPESI 804



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGHA   +I D++ R+  + G  V    G D HG  +   
Sbjct: 62  KDAPTYMFYDGPPTANGKPHIGHALTRVIKDMIPRYRTMKGYKVPRKAGWDTHGLPVEIE 121

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    +   +DV+      DD   T    +
Sbjct: 122 VEKELGINGKEQIEKYGVAPFIEKCKESVWKYKSMWEQFSDVIGFWADMDDPYVTYHNSY 181

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG +YKG     Y  R     +  EV +G  
Sbjct: 182 IESEWWALKQIWDKGLLYKGFKVVPYCPRCGTPLSSHEVAQGYK 225


>gi|237729195|ref|ZP_04559676.1| valyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908924|gb|EEH94842.1| valyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 951

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLAELLEKRTGNMMQPQLAEKIAKRTEKQFPDGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|300722323|ref|YP_003711608.1| leucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628825|emb|CBJ89403.1| leucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 860

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 9/238 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYSNIDYMKNQLKMLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G          + V+  E   +F +++AY ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDSQVERKEIPQWFIKITAYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +   ++   ++           G   + +++ S++        PD      YV + A 
Sbjct: 207 DKLEDWPEQVKIMQRNWIGRSEGVEIIFNVADSQEKLTVYTTRPDTFMGATYVAVAAG 264



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 20/189 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++++ G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVDKYGADTVRLFMMFAAPPELTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R V               + T   + +     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWRLVYEHSNKGATQRLDTNSLTTEQKDLRRDLHKTIAKVTDDVGRRQAFNTAVAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R          ++T  DRA     +  E +  +  +L    P     ++  L  
Sbjct: 732 LMNKLTR--------ATQETEQDRA-----LMQEALTAVVRMLSPITPHACFIMWKALGN 778

Query: 480 ADENRCFQS 488
            ++    + 
Sbjct: 779 ENDIDIAEW 787


>gi|328953428|ref|YP_004370762.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453752|gb|AEB09581.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 832

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 6/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y+     YP+ + H+GH     I DV+AR+  + G ++L   G D  G     
Sbjct: 29  LSDKSKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYKHMQGFNILHPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   GV    +  +N    R     L  SYD    + T +  ++   + ++ ++  +G 
Sbjct: 89  AALAHGVHPAAWTYENIDYMRRQLKSLGYSYDWSRELATCDPDYYRWEQSVFIEMFRRGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    +++V  GA        H PV   E E +FF+++ Y ++LL 
Sbjct: 149 AYKKLSPVNWCDHCQTVLANEQVEDGA----CWRCHQPVALRELEQWFFKITDYVEELLE 204

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
           Y +  P +   +            G
Sbjct: 205 YCDRLPGWPERVLTMQRNWIGKSHG 229



 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y          D  +  +W A D ++ G +    H +Y   F         +  +
Sbjct: 505 WYFLRYACPDYQEGILDRPRVNYWMAVDQYIGGIEHAVLHLLYARFFTKVLRDLGYIQVD 564

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P   ++ + G +L  G K+SKS GNV+DP E+I   G D  R F +      KD  +  
Sbjct: 565 EPFT-RLLTQGMVLMDGAKMSKSKGNVVDPNELIGTYGADTTRLFCLFAAPPEKDLEWSD 623

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+         N I +LV   +   LK       T    +     +     + +     
Sbjct: 624 QGVAGAFR--FLNRIWSLVKELLE-SLKSAPPWRGTGAELSPELRRLRQKVHQTIHRATS 680

Query: 404 NMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +++     + A+A ++ LV+++ +    ++P     T+P        V  E I  L ++L
Sbjct: 681 DIEARFHFNTAIAALMELVNDLYK--AREEP----ATDPSSNHLAASVWREAIEVLILIL 734

Query: 463 QAFVPKLANKIFDILFVA 480
               P LA +++  L   
Sbjct: 735 SPMAPHLAEELWHHLGHP 752


>gi|304314921|ref|YP_003850068.1| valyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588380|gb|ADL58755.1| valyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 876

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 127/375 (33%), Gaps = 24/375 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G  ++        ++ + +    ++    D +    +   V    +        +  
Sbjct: 337 QNVGTCWRCKTPIEILVKKQWFVAVKKLIP--DVRRAAEEMEWVPEHMKTRLLNWTGSMD 394

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYI 227
                  +      +P+    E      +    L +     D GIK           + +
Sbjct: 395 WDWCISRQRIFATPIPVWYCKECGRVHVADEDMLPVDPTRDDPGIKCECGSTEFIGEEDV 454

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLP 285
           +  W+D+  + L+  G+ D         +PA+L   G DI+R  A Y       L+   P
Sbjct: 455 LDTWMDSSISPLSVAGWPDESYRDL---FPANLRPQGHDIIRTWAFYTILRCMALTGEKP 511

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + V +       G K+SKS GNVI P EV+E+ G DALR +       G D  +    
Sbjct: 512 FSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADALRLW-AAGSVPGSDVPFAWKD 570

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +K            N   R +S+ L D          F   D  ILS    +++++ E++
Sbjct: 571 VK--YGYKFLRKFWN-AFRFISIHLGD-----DREAEFRPLDRWILSRLMNLVRDVTESL 622

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      A+ ++   V     D Y +A K     + +             V+     LL 
Sbjct: 623 EEYNFAAAVGRIQKFVWHDFCDEYIEAVKYRLYSEGDGASRVAAQTTLRMVLETCLRLLA 682

Query: 464 AFVPKLANKIFDILF 478
              P    ++   + 
Sbjct: 683 PVTPHFTEEVHQHIG 697



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 115/402 (28%), Gaps = 26/402 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  I T   YP    H+GH    +  D++ARF R+ G DVLF  G D HG       
Sbjct: 35  TKPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFRRMRGFDVLFPQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                 +N +  ++    L  S D      T    +    +
Sbjct: 95  EETHNIKKSDVSREEFRRLCVELTQENIKMMKEQMQRLGFSQDWSHEFVTMTPEYMRRTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME-EEGYF 166
           + + ++ + G IY+G +   +  R E      EV    +    N    PV   E  E   
Sbjct: 155 LSFLRMYEDGLIYQGVHPVNWCPRCETAIAFAEVEYVENETNLNYVRFPVDGGEDIEIAT 214

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG---IKIPDD 223
            R       +        +     E +   +      +K +       ++G   + I   
Sbjct: 215 TRPELMAACVAVAVHPDDDRFSEFEGKEIEVPLFGQKVKLIKDPDVDPEFGTGAVMICTF 274

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
                  W++     +             A  +        K+ +           L   
Sbjct: 275 GDKTDVTWVNRHNLDIIEAIDERGYMTEAAGKYKGLTIRECKEQIV--EDLEREGFLLRK 332

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY-- 341
            P+ + V +        E + K     +   ++I +V   A     V E    +   +  
Sbjct: 333 EPVKQNVGTCWRCKTPIEILVK-KQWFVAVKKLIPDVRRAAEEMEWVPEHMKTRLLNWTG 391

Query: 342 --DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
             D D    R                  + + D D +   P 
Sbjct: 392 SMDWDWCISRQRIFATPIPVWYCKECGRVHVADEDMLPVDPT 433


>gi|172041055|ref|YP_001800769.1| valyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852359|emb|CAQ05335.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 928

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 119/378 (31%), Gaps = 63/378 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++  +                 I P  +      +V   + D ++SR+   
Sbjct: 373 PIEPRLSLQWWVDVKKLAKMSGDAVREGDTTIYPASQEPRWFDWVD-NMHDWTISRQ-LW 430

Query: 216 WG--IKIPDDPQY----------------------IMYVWIDALTNYLTTTGYLDNPDGS 251
           WG  I I   P+                       ++  W  +     +T G+ +N    
Sbjct: 431 WGHRIPIWYGPEGEVVCCGPDDEPPTGEGWHQDEDVLDTWFSSALWPFSTMGWPENTP-D 489

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSAN------------------------LPLP 287
             KF+P  + V G DIL F       F   A+                        +P  
Sbjct: 490 LQKFYPTSVLVTGYDILFFWVARMMMFATFADTLEGSPLHGKANGENQAARDGRPQVPFK 549

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                       G K+SKSLGN IDP++ + + G DALR+ L R    G D    +   +
Sbjct: 550 DVFLHGLVRDEHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGADLPVGEHSAQ 609

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              N   A  + N  ++   M       + P     T++D  IL         + + ++ 
Sbjct: 610 SSRN--FATKLYN-ATKFALMNGAQIGELPPRE-ELTDADRWILDRLEATRALVDDALER 665

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQK-----PWELK-KTNPDRASTVLYVTVEVIRQLA 459
                A   +         D Y +  K      W+   K    R      V   V+  + 
Sbjct: 666 YEFSLANENLYKFAWGEFCDWYLEIAKVQIPRDWDSATKEEYARGVNTQVVLGRVLDAVL 725

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL   +P +   ++  L
Sbjct: 726 RLLHPAMPFVTETLWTAL 743



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I         + H+GHA +  + D ++R  R+ G +VL+  G+D  G      
Sbjct: 51  SDKPPFSIVLPPPNVTGRLHMGHALDHTLIDAMSRRRRMQGYEVLWLPGSDHAGIATQTR 110

Query: 62  AQ--------------------NAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                          K  +     +  R + D +D S + F  T ++
Sbjct: 111 VESDLKKRESKDRFDYGREEFIERVWEWKDEYGGLIQQQMRAIGDSVDWSRERF--TLDE 168

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D+G IY+      +S   +   +D EV  
Sbjct: 169 GLSRAVQTIFKALFDQGMIYQDNRMVNWSPVLQTAISDIEVNY 211


>gi|18158855|pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl-
           Adenylate Analogue
 gi|18158860|pdb|1JZS|A Chain A, Isoleucyl-Trna Synthetase Complexed With Mupirocin
 gi|157831464|pdb|1ILE|A Chain A, Isoleucyl-Trna Synthetase
          Length = 821

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 127/374 (33%), Gaps = 13/374 (3%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEG--YFFRL 169
                +  +      +DE   N+ E++       +G+Y     N V W       +   L
Sbjct: 397 MYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWALSRNRYWGTPL 456

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
             +  +     E+   F     R  + +          +         G  +   P Y++
Sbjct: 457 PIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGGTMRRVP-YVI 515

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            VW D+      +  Y    +    + +PAD    G D     F++++    +L  ++  
Sbjct: 516 DVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAF 575

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +  KG+K+SKS GNV+DP ++I + G DALR+++        D  +  + +
Sbjct: 576 KNVICHGLILDEKGQKMSKSKGNVVDPWDIIRKFGADALRWYIYVSAPPEADRRFGPNLV 635

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENM 405
           ++ V                   L   D   P P     E D  +L+    ++Q + E +
Sbjct: 636 RETVRDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEAL 695

Query: 406 QNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      +   +   V       Y    +    K  +            E +  +A L  
Sbjct: 696 EAYDPTTSARALRDFVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALVLVATLAA 755

Query: 464 AFVPKLANKIFDIL 477
            F P LA  ++  L
Sbjct: 756 PFTPFLAEVLWQNL 769



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +  +       N  PH+GHA      D+  R+  + G       G D HG  +   
Sbjct: 35  KGGPRYTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELE 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V    + +    + +   +  +D   T E  +
Sbjct: 95  VEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + D+G +Y+      Y  R     +  EV  G  
Sbjct: 155 IESIWWSLKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYK 198


>gi|311281184|ref|YP_003943415.1| valyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750379|gb|ADO50131.1| valyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 951

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNAGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLAELLEKRTGNMMQPQLAEKIRKRTEKQFPDGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           + V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRNTLITVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|317154515|ref|YP_004122563.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944766|gb|ADU63817.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 833

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 6/223 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA
Sbjct: 32  SRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKSMQGFNVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  QN    R+    L  SYD    I +    ++   +  + K  +KG  Y
Sbjct: 92  IKHGVHPAAWTYQNIAEMREQLQRLGYSYDWRREIASCRPEYYKWEQKFFLKFLEKGLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G          + V+  + E +F R++ Y D+LL+  
Sbjct: 152 RKHSPQNWCPDCNTVLANEQVEDGK----CWRCDSEVEQKDMEQWFLRITDYADELLADL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +S            +     +S   +L+   K  D  I +   
Sbjct: 208 DSLEGGWPERVLTMQRNWIGRSYGAELTFQVKDMDHTIPVFTT 250



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 33/273 (12%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y                +W   D ++ G +    H +Y   F         + A+
Sbjct: 512 WYYLRYCDPRNEDAPFSQEATGYWMNVDQYIGGIEHAILHLLYSRFFTKALRDTGFVQAS 571

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    + + G +L  G K+SKS GNV+DP  +IE  G DA R F++      K+  +  
Sbjct: 572 EPFA-NLLTQGMVLKDGGKMSKSKGNVVDPNSMIERYGADATRLFILFASPPIKELEWSD 630

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEI 401
            G++       A    + + R V  +      + PT  A  +SD    +       ++ +
Sbjct: 631 QGIEG------AFRFLSRLWRLVEELEDRLHAVRPTSHAAPKSDAARQLRFKEHDTVRRV 684

Query: 402 RENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +++N    + A+A V+ LV+E+    D      L  T P   ++        I     
Sbjct: 685 TRDIENEFQFNTAIAAVMELVNEMYALKDE-----LADTEPKALASA-------IATAVT 732

Query: 461 LLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
           LL    P L  +++  +  A+    + + + D+
Sbjct: 733 LLSPVAPHLCEELWQTMGHAETLATQSWPTFDE 765


>gi|83648017|ref|YP_436452.1| leucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726292|sp|Q2SBE7|SYL_HAHCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83636060|gb|ABC32027.1| leucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 861

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    ++   +L   YD    + T    ++   +  + ++ +KG +Y
Sbjct: 91  LKNNVAPAKWTYENIAYMKNQLKLLGFGYDWNRELATCRPEYYKWEQWFFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V  G            V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKMSTVNWDPVDETVLANEQVIDGKG----WRSGAVVERREIPQWFIKITDYAEQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLENWPEQVKTMQRNWINKSEG 229



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 81/198 (40%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I++ G D +R F +      +   + + G++         G   
Sbjct: 619 EKMSKSKNNGVDPQELIDKYGADTVRLFTMFAAPPEQSLEWSESGVE---------GQHR 669

Query: 361 LVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
            + R   ++    +     P       E+  ++       ++++ +       I+  +A 
Sbjct: 670 FLRRLWKLVHTHVEKKGAAPLNVAELNETQRTLRRKTHETIKKMTDEFNHRMAINTGIAM 729

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L++E+ R+         +  +P   + V     E +    ++L   VP +++ ++  
Sbjct: 730 VMELLNELSRF---------EDDSPQGLAVVQ----EALETAVLVLAPIVPHISHGLWRE 776

Query: 477 LFVAD--ENRCFQSLDQR 492
           L   D   N  +  LD++
Sbjct: 777 LGHEDVVMNAPWPQLDEK 794


>gi|109897887|ref|YP_661142.1| leucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123171408|sp|Q15VK0|SYL_PSEA6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109700168|gb|ABG40088.1| leucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 870

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK Y  +   YP+ + H+GH     I DV++RF R++G +VL   G D  G     A
Sbjct: 31  EDKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRMNGKNVLQPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N       +  QN    ++    L   Y  D  + T +K ++   +  + ++ +KG +
Sbjct: 91  ALNNNTAPAKWTYQNIDYMKNQLKSLGFGYDWDREVATCKKDYYRWEQWFFTRLYEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  E   +F +++ Y ++LL+ 
Sbjct: 151 YKKNSTVNWDPVDHTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYAEELLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E   ++   +    +       G
Sbjct: 207 LEQLEDWPEQVRAMQKNWIGRSEG 230



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 80/199 (40%), Gaps = 31/199 (15%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  VI+  G D +R F +      +   +   G++         G    
Sbjct: 626 KMSKSKNNGIDPQHVIDLYGADTIRVFTMFAAPPEQTLEWVDSGVE---------GANRF 676

Query: 362 VSRSVSMILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           + R   +     D +           A T   +++     R + ++ +++  +   + A+
Sbjct: 677 IKRVWKLTQDHIDALDGDTAPAIDKTALTGDQKTLRRAVHRTIAKVTDDVGRRQTFNTAV 736

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++ + R      P   + T+ D+A     V  E I  + +LL    P + + ++
Sbjct: 737 AAIMELLNSLQR-----AP---QSTDQDKA-----VLREAIESVVLLLNPIAPHMCHILW 783

Query: 475 DILFVAD--ENRCFQSLDQ 491
             L   +  E   + ++D+
Sbjct: 784 HDLGHKNDIETAPWPAVDE 802


>gi|332175224|gb|AEE24478.1| valyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 921

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 124/394 (31%), Gaps = 81/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++  +       +   +S     +P         ++   ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVAVEELAKPAIDAVKSGEIKFVPENWDKTYYQWMN-NIQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +      T G+  
Sbjct: 406 GHRIPAWYDENGKIYVGRTEAEVREKNALDASVSLRQDEDVLDTWFSSALWPFATMGWPK 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                     P+ + V G DI+ F    +       +  +P  +   +      +G+K+S
Sbjct: 466 KTPELDTFV-PSAVLVTGFDIIFFWVARMIMMTKKFTGQIPFKEIYITGLIRDEQGDKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNVIDPI++I+                                       G DALR+
Sbjct: 525 KSKGNVIDPIDLIDGISIDDLVAKRTSGMMQPKLAAKIEKNTRKSYPEGFAAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
                 +  +D  +D   ++     +  N + N  SR V M  +D D          + +
Sbjct: 585 TFAAMASTSRDISFDVKRVEG--YRNFCNKLWN-ASRFVLMNAEDQDTGANGGDMELSLA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D+ IL+   + L++  + +       A   V         D Y +  KP  L       A
Sbjct: 642 DKWILARFQQTLKDFEDALSGYRFDIAANLVYEFTWNQFCDWYLELSKP-VLNSEVSTEA 700

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                 +  V V+  +  L    +P +  +I+  
Sbjct: 701 QKRGTRHTLVNVLESILRLAHPIMPFITEEIWQR 734



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I           H+GH ++  I D L R+HR+ G + L+  GTD  G       
Sbjct: 29  EGQPYCILLPPPNVTGSLHMGHGFQQTIMDTLTRYHRMKGDNTLWQCGTDHAGIATQMVV 88

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        +  ++  N       L  S  +D  + T +    +
Sbjct: 89  ERQLNAQGKTRHDLGRDAFVDKIWDWKKESGGNITQQMRRLGTSPDWDREVFTMDDDLSE 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 149 AVNEVFVRLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEENGFMWHMRYPL 201


>gi|303245563|ref|ZP_07331846.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492826|gb|EFL52691.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 837

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+ARF R++G +VL   G D  G     AA
Sbjct: 30  SRPKYYVLEMFPYPSGRIHMGHVRNYCIGDVVARFKRMEGNNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  + R     L  SYD    + T    ++   +  + K+ +KG +Y
Sbjct: 90  IKHKLHPAAWTLSNIESMRTQIKRLGYSYDWRRELATCHPDYYVHEQRFFLKLLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G           PV   + E +F R++AY ++LL   
Sbjct: 150 RKYSPQNWCETCGTVLANEQVIDG----CCWRCDQPVVQKDLEQWFLRITAYAEELLDDL 205



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 27/260 (10%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                + +        D    K+W P D ++ G +    H +Y   F         L+ +
Sbjct: 508 WYFIRFASARDRDRPFDPEATKYWLPVDQYIGGIEHAILHLLYSRFFVKALRDLGYLTFD 567

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    + + G ++  G K+SKS GNV+DP ++I + G D +R F++      KD  +  
Sbjct: 568 EPFA-NLLTQGMVIKDGSKMSKSKGNVVDPDDMIAKYGADTVRVFILFAAPPEKDLDWSD 626

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQ 399
            G++    +   + +  LV+  ++ +L       P      G   E    +         
Sbjct: 627 TGIEGA--SRFLSRLWRLVTEELAAVLSPVAACAPAGELGQGGLPELFAELRRREHATAA 684

Query: 400 EIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   ++ +    + A+A  + LV+ +    +        K+ P  A  V       +  L
Sbjct: 685 KAGADIRERFQFNTAIAAAMELVNFLYANVETL------KSEPKGAKAVSS----AVATL 734

Query: 459 AILLQAFVPKLANKIFDILF 478
             +L    P +  +++  + 
Sbjct: 735 LTVLSPIAPHICEELWQQIG 754


>gi|163741358|ref|ZP_02148749.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385092|gb|EDQ09470.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 1027

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 19/270 (7%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIY 274
           I +  DP  ++  W  +    + T G+ +  +   +K++P    V G+DIL F     + 
Sbjct: 580 IILRRDPD-VLDTWFSSGLWPIGTLGWPEWTE-ETSKYFPTSTLVTGQDILFFWVARMMM 637

Query: 275 WPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +L  +LP+ +++      LH      KG+K+SKS GNV+DP+E+I+E G DALR+ 
Sbjct: 638 MQLAVLDQDLPVEQRIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEYGADALRFT 697

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESD 387
                + G     D   +      +    + N V+ +  + +          P A    +
Sbjct: 698 NAAMASLGGVLKLDMQRIAG--YRNFGTKLWNAVNFAHFNNVYDPATPAYDIPDAKAAVN 755

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA- 444
           + I+   ++V  E+   ++    + A   + + V     D Y +  KP  L  +  +   
Sbjct: 756 QWIIGETAKVRVEVDAALEAYRFNDAALGLYAFVWGKVCDWYIELSKP--LFGSEDEAVI 813

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +        V+ Q  ILL   +P +  +++
Sbjct: 814 AETRQTLGWVLDQCMILLHPIMPFITEELW 843



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 34/189 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +           H+GHA+   + D+L R+ R+ G D L+  GTD  G      
Sbjct: 33  KRSETYSVMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIRTT------ 98
            +     T+                  + +Q+     +    L  S D F RT       
Sbjct: 93  VERELANTQQPSRAELGREKFLEKIWEWKEQSGGTIINQLKRLGASCD-FDRTAFTMAGA 151

Query: 99  ----------EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
                         HD    ++ ++ +KG IY+G     +    E   +D EV       
Sbjct: 152 QGDTRTGHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAG 211

Query: 149 YYNAQHNPV 157
           +      P+
Sbjct: 212 HMWHFKYPL 220


>gi|146279117|ref|YP_001169276.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557358|gb|ABP71971.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 987

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/285 (20%), Positives = 117/285 (41%), Gaps = 13/285 (4%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +  +   L D ++S         +  DP  ++  W  +    + T G+ ++ D    +
Sbjct: 527 EAVDRLAQALADYNVSEDPTHLVYPVWRDPD-VLDTWFSSGLWPIGTLGWPEDTD-ELRR 584

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++P ++ + G DI+ F    +      +   +P             KG+K+SKSLGNV+D
Sbjct: 585 YFPTNVLITGFDIIFFWVARMMMMQLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVLD 644

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILK 371
           P+E+I+E G DA+R+ L    A G+D       ++     +    + N    + ++ + +
Sbjct: 645 PLELIDEFGADAVRFTLTAMAAMGRDLKLSTARIQG--YRNFGTKLWNACRFAEMNGVWE 702

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
            +      P A    +  I+    RV +++   +       A   + + V     D Y +
Sbjct: 703 GHATQAAPPQATATVNRWIIGETGRVREDVDAALAAYRFDVAANALYAFVWGKVCDWYVE 762

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             KP      + + A+        V+ Q  ILL   +P +  +++
Sbjct: 763 FSKPLF----DTEAAAETRATMAWVLDQCMILLHPIMPFVTEELW 803



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 21/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVER 95

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHD 104
                                   + +Q+     +    L  S D + R   T +     
Sbjct: 96  ELAKAGQPGRREMGREAFLSKVWEWKEQSGGTIVNQLKRLGASCD-WSRNAFTMDANFQR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++  + +KG IY+G     +    E   +D EV +            P+
Sbjct: 155 AVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEVEQVEVNGSMWRLRYPL 207


>gi|150005109|ref|YP_001299853.1| valyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166225520|sp|A6L3G7|SYV_BACV8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|149933533|gb|ABR40231.1| valyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 875

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNTNLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|237739547|ref|ZP_04570028.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423155|gb|EEO38202.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 859

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VAGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G+   ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 136/417 (32%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLSSKDALIKIAEYVEEKNLGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 +L           P+E  N+              +        +   D      
Sbjct: 447 DENLPVILPDDIEFSGNGNPLETSNQFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNLNLPFAKEIVDKWTPVDQYIGGVEHAVMHLLYARFFFKVLRDLGLL 556

Query: 281 SANLPL------------------------PKKVF---------SHGFILHKGEKISKSL 307
           +AN P                         PK V          S   +  K EK+SKS 
Sbjct: 557 TANEPFKRLLTQGMVLGPSYYSEKENRYLLPKDVVLKGDKAYSESGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLV 421
           +I ++ +              ++ D+++L   ++ ++++ + ++N    + A+A  + L+
Sbjct: 668 LIFENSELVKNAHDDIDYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y           TN   +     +    ++++ ++L  FVP   ++I++ L 
Sbjct: 728 NEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEELG 774


>gi|285019240|ref|YP_003376951.1| leucyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474458|emb|CBA16959.1| putative leucyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 880

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 78/205 (38%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I DV++R+ R++G +VL   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTIGDVISRYQRMNGKNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAQWTYANIAHMRSQLKSLGYAIDWSREFATCRPEYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPVDQTVLANEQVIDG----CGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +  P +   ++           GL
Sbjct: 210 LDQLPGWPESVKTMQRNWIGRSEGL 234



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 29/199 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+         +G+  
Sbjct: 637 EKMSKSKNNGVDPQAMVGKYGADTVRLFSMFAAPPEQSLEWNEAGV---------DGMAR 687

Query: 361 LVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R  + + K   D         A     +++       + ++ ++   +   + A+A 
Sbjct: 688 FLRRLWAQVHKHAADGAAPALDSAALDAEHKALRRKTHETIGKVADDYGRRHSFNTAIAA 747

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L +             L K +   A     V  E +    +LL    P  ++ ++ +
Sbjct: 748 VMELTNA------------LAKFDDASAQG-RAVRQEALEAAVLLLNPITPHTSHALWQV 794

Query: 477 LFVAD---ENRCFQSLDQR 492
           L  A    E+  F   DQ 
Sbjct: 795 LGHAPTLLEDVPFPHSDQA 813


>gi|237807328|ref|YP_002891768.1| valyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499589|gb|ACQ92182.1| valyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 950

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 132/398 (33%), Gaps = 85/398 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R        +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVRADVLAKPAIEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDNNGKVYVGRNEAEVRANYSLAADVALRQDEDVLDTWFSSALWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ V G DI+ F         +           +P      +     
Sbjct: 491 EQTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFVKNEDGTPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DP+++I+ +                                     
Sbjct: 550 EEGQKMSKSKGNVLDPLDMIDGISLPDLLEKRTGNMMQPQLAEKIGKRTEKQFPDGIEAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT- 379
           G DALR+ L    + G+D  +D   L      +  N + N  SR V M  ++ D      
Sbjct: 610 GTDALRFTLAALASTGRDINWDMKRLDG--YRNFCNKLWN-ASRYVLMNTEEQDCGFSGG 666

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
              F+ +D  I S     +QE+R  M      +A   +   +     D Y +  KP  L 
Sbjct: 667 EMQFSLADRWITSQLQLTIQELRHAMDTYRFDQAAGVLYEFIWNQFCDWYLELTKP-VLW 725

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +        +  V V+  L  L    +P +   I+ 
Sbjct: 726 HGSEAEQRATRHTLVTVLESLLRLAHPIMPFMTESIWK 763



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 19/177 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
              I           H+GHA++  I D L R+ R+ G + L+  GTD  G       +  
Sbjct: 34  NYCIVIPPPNVTGSLHMGHAFQQTIMDALIRYQRMLGKNTLWQVGTDHAGIATQMVVERK 93

Query: 64  --------NAGVTTKVFVDQNSRNFRDMAD---------VLDISYDDFIRTTEKRHHDTC 106
                         + F+D+  +   +               + +D    T +       
Sbjct: 94  IAAEEGKTRHDYGREAFIDKIWQWKEESGGTITRQMRRLAASVDWDREAFTMDPALSHAV 153

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           + ++ ++ ++  IY+G     +  +     +D EV              P+   E+ 
Sbjct: 154 QEVFVRLYEQDLIYRGKRLVNWDPKLHTAISDLEVENKEVKGNMWHLRYPLADGEKT 210


>gi|222099493|ref|YP_002534061.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571883|gb|ACM22695.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 839

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 44  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 104 AIEKGIHPEEWTRKNISIIRKQVKRLGISYDWNREIATCDEEYYKWTQWIFLQLYKNGLA 163

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 164 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIKHLEQWFFKITDYAERLLND 219

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++          +G
Sbjct: 220 LEKLTGWPEHVKTMQRNWIGKSTG 243



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 115/342 (33%), Gaps = 37/342 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 442 QRYWGAPIPIIYCEKCGTVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKKTKCPICGG 501

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 502 EAQRET---------DTMDTFVDSSWYFLRYVNPHLDDKPFEPDDVNYWLPVDQYIGGVE 552

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P ++IE
Sbjct: 553 HAILHLLYSRFITKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDDMIE 611

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++              +  +   IL        
Sbjct: 612 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR------FIRRLWNTFYTILPHVKEETV 665

Query: 379 TPGAF-TESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              +  T  ++ +      ++++I E+++     + A++ ++ L++ +++Y         
Sbjct: 666 EGLSLTTPVEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELINHLNQYL-------- 717

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +          +  E+   L ++L  F P LA + +  L 
Sbjct: 718 --SGVPEDQWNRKLLREIAENLTLVLSPFAPHLAEEFWHELG 757


>gi|61657413|emb|CAI44328.1| leucyl-tRNA synthetase [Thermotoga sp. RQ7]
          Length = 839

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 44  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 104 AIEKGIHPEEWTRKNISIIRKQVKRLGISYDWNREIATCDEEYYKWTQWIFLQLYKNGLA 163

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 164 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIKHLEQWFFKITDYAERLLND 219

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++          +G
Sbjct: 220 LEKLTGWPEHVKTMQRNWIGKSTG 243



 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 115/342 (33%), Gaps = 37/342 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 442 QRYWGAPIPIIYCEKCGTVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKKTKCPICGG 501

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 502 EAQRET---------DTMDTFVDSSWYFLRYVNPHLDDKPFEPDDVNYWLPVDQYIGGVE 552

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P ++IE
Sbjct: 553 HAILHLLYSRFITKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDDMIE 611

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++              +  +   IL        
Sbjct: 612 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR------FIRRLWNTFYTILPHVKEETV 665

Query: 379 TPGAF-TESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              +  T  ++ +      ++++I E+++     + A++ ++ L++ +++Y         
Sbjct: 666 EGLSLTTPVEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELINHLNQYL-------- 717

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +          +  E+   L ++L  F P LA + +  L 
Sbjct: 718 --SGVPEDQWNRKLLREIAENLTLVLSPFAPHLAEEFWHELG 757


>gi|291461006|ref|ZP_06026392.2| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379583|gb|EFE87101.1| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 862

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 32  VAGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G+   ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 92  AAIQNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 151

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 152 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 208

Query: 179 YY 180
            +
Sbjct: 209 GH 210



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 68/417 (16%), Positives = 136/417 (32%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 390 FNGLSSKDALIKIAEYVEEKNLGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 449

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 +L           P+E  N+              +        +   D      
Sbjct: 450 DENLPVILPDDIEFSGNGNPLETSNQFK----------EATCPCCGGKARRDTDTMDTFV 499

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P D ++ G +    H +Y   F         L
Sbjct: 500 DSSWYFLRYCDPKNLNLPFTKEIVDKWTPVDQYIGGVEHAVMHLLYARFFFKVLRDLGLL 559

Query: 281 SANLPL------------------------PKKVF---------SHGFILHKGEKISKSL 307
           +AN P                         PK V          +   +  K EK+SKS 
Sbjct: 560 TANEPFKRLLTQGMVLGPSYYSEKENRYLLPKDVVLKGDKAYSEAGEELQVKVEKMSKSK 619

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 620 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 670

Query: 368 MILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLV 421
           +I ++ +              ++ D+++L   ++ ++++ + ++N    + A+A  + L+
Sbjct: 671 LIFENSELVKNAHDDIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 730

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y           TN   +     +    ++++ ++L  FVP   ++I++ L 
Sbjct: 731 NEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEELG 777


>gi|222087922|ref|YP_002546460.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221725370|gb|ACM28526.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 876

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA+
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAR 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           +  V  K +  QN  + +     + +S D      T +  ++   ++L+  +  KG IY+
Sbjct: 93  DNKVHPKEWTYQNIASMKAQLKAMGLSLDWSREFATCDVEYYHRQQMLFIDMMQKGLIYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +  +LL   +
Sbjct: 153 KKSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +   +   +    +       GL    
Sbjct: 209 TLDHWPEKVRLMQKNWIGRSEGLTIRW 235



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 115/346 (33%), Gaps = 41/346 (11%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               V     G+    + + +  +++   Y+ R +A      +   +   ++   +    
Sbjct: 486 TWRHVACPQCGKDARRETDTMDTFVDSSWYYTRFTAPWADEPTDKAAADHWLPVDQYIGG 545

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R   + G     +P          L           +      + 
Sbjct: 546 IEHAILHLLYSRFFTRAMRETGHVDAREP-------FKGLFTQGMVVHETYSRGNGLTRE 598

Query: 256 W--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W  PAD+ +   D  R   +      ++                   EK+SKS  NV+DP
Sbjct: 599 WVSPADICIEETDGQRRATLLSTGEDIAIGA---------------IEKMSKSKKNVVDP 643

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++I   G D  R+F++ +    +D  + + G++       A+     + R VS    + 
Sbjct: 644 DDIIASYGADTARFFVLSDSPPDRDVIWSEAGVEG------AHRFTQRMWRLVSEAADEL 697

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             +   P    E+  +I  +  R L+ ++ +      ++A+A++   V+ +        P
Sbjct: 698 KAVTSVPAKEGEA-LAISQIAHRTLKAVQADYDKLAFNKAVARIYEFVNAL------AAP 750

Query: 434 WELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILF 478
             L K       +       E +  L  L+    P LA +    L 
Sbjct: 751 --LAKVAAGGTDSSYRSAAREAVEILIALVAPITPHLAEECSTALG 794


>gi|303327269|ref|ZP_07357711.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863257|gb|EFL86189.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 837

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 6/181 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 31  SDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARCKRMQGFNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R     L  SYD    I T    ++   ++ + ++ +KG +
Sbjct: 91  AIKHHVHPAQWTYANIDNMRAQLQRLGYSYDWSREIATCRPEYYRWEQMFFLRLLEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G          + V+  +   +F +++AY D+LL+ 
Sbjct: 151 YRKKAPQNWCPSCHTVLANEQVIDG----LCWRCDSRVEQKDLTQWFLKITAYGDELLAD 206

Query: 180 Y 180
            
Sbjct: 207 L 207



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 109/324 (33%), Gaps = 32/324 (9%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--- 253
           +     G   L  +    +        P       +D             +    KA   
Sbjct: 467 VKVRDDGRSPLPETPSFANCACPCCGGPARRETDTMDTFVESSWYFARYTDARDDKAPFK 526

Query: 254 -----KFWPADLHVIGKDILRFHAIYWPAFLLSAN---------LPLPKKVFSHGFILHK 299
                 + P D ++ G +    H +Y   F                    + + G +L  
Sbjct: 527 PEALQYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGFFPKDLAEPFTNLLTQGMVLKD 586

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNV+DP E+I++ G D +R F +      +D  +   G++    +   + + 
Sbjct: 587 GGKMSKSKGNVVDPTEMIKKYGADTVRLFCLFAAPPERDFDWSDSGIEGA--SRFLSRVW 644

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            L +   + +L           A +     +       +++  E+M      + A+A V+
Sbjct: 645 RLFTEEEARLLPLKACGSSAEDADSGESRDLRRREHLTVKKAGEDMGGRFQFNTAIAAVM 704

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            LV+ +  Y   +K   L ++  +R      V    +  +  LL    P L  ++++ L 
Sbjct: 705 ELVNAM--YLSREK---LGQSEAER-----RVFSSAMATVLTLLSPITPHLCEELWERLG 754

Query: 479 VADE--NRCFQSLDQRLKPGFMLH 500
              +     +   D+      ML 
Sbjct: 755 HTAQLAAEPWPQWDEAATAQDMLT 778


>gi|218703976|ref|YP_002411495.1| leucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403904|ref|ZP_06647898.1| leuS [Escherichia coli FVEC1412]
 gi|298379680|ref|ZP_06989285.1| leucyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|226695259|sp|B7N9P8|SYL_ECOLU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218431073|emb|CAR11949.1| leucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|291428490|gb|EFF01515.1| leuS [Escherichia coli FVEC1412]
 gi|298279378|gb|EFI20886.1| leucyl-tRNA synthetase [Escherichia coli FVEC1302]
          Length = 860

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  K  +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKDLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 107/323 (33%), Gaps = 77/323 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLL--- 280
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 281 ------------------------------SANLPLPKKVFSHGFILHKGE--------- 301
                                         +        V +      KG          
Sbjct: 550 DAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG---- 665

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IH 411
             AN     V + V       D       A TE  +++     + + ++ +++  +   +
Sbjct: 666 --ANRFLKRVWKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFN 723

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++++     A+ P     T+ ++   ++    E +  +  +L  F P +  
Sbjct: 724 TAIAAIMELMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICF 770

Query: 472 KIFDILFVAD--ENRCFQSLDQR 492
            ++  L      +N  +   D++
Sbjct: 771 TLWQELKGEGDIDNAPWPVADEK 793


>gi|163739653|ref|ZP_02147062.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161387112|gb|EDQ11472.1| valyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 1024

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 19/283 (6%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +   +       + +  DP  ++  W  +    + T G+ +  +   +K++P    V G
Sbjct: 564 WEYRHASAGVQAFVGLYRDPD-VLDTWFSSGLWPIGTLGWPEWTE-ETSKYFPTSTLVTG 621

Query: 265 KDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIE 315
           +DIL F     +     +L  +LP+ +++      LH      KG+K+SKS GNV+DP+E
Sbjct: 622 QDILFFWVARMMMMQLAVLDQDLPVEQRIPFDTVYLHGLVRDAKGKKMSKSTGNVVDPLE 681

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYD 374
           +I+E G DALR+      + G     D   +      +    + N V+ +  + +     
Sbjct: 682 IIDEYGADALRFTNAAMASLGGVLKLDMQRIAG--YRNFGTKLWNAVNFAHFNNVYDPAP 739

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
                P A    ++ I+   ++V  E+   ++    + A   + + V     D Y +  K
Sbjct: 740 PAYDIPDAKAAVNQWIIGETAKVRVEVDAALEAYRFNDAALGLYAFVWGKVCDWYIELSK 799

Query: 433 PWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           P  L  +  +   +        V+ Q  ILL   +P +  +++
Sbjct: 800 P--LFGSEDEAVIAETRQTLGWVLDQCMILLHPIMPFITEELW 840



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 59/188 (31%), Gaps = 33/188 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +           H+GHA+   + D+L R+ R+ G D L+  GTD  G      
Sbjct: 33  KRSETYSVMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMV 92

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTT------- 98
            +                        + +Q+     +    L  S D F RT        
Sbjct: 93  VERELAKEGKKRTDFSRPEFLEKIWEWKEQSGGTIINQLKRLGASCD-FDRTAFTMAGAQ 151

Query: 99  ---------EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
                        HD    ++ ++ +KG IY+G     +    E   +D EV       +
Sbjct: 152 GDTRTGHENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGH 211

Query: 150 YNAQHNPV 157
                 P+
Sbjct: 212 MWHFKYPL 219


>gi|240102645|ref|YP_002958954.1| isoleucyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910199|gb|ACS33090.1| Isoleucyl-tRNA synthetase (ileS) [Thermococcus gammatolerans EJ3]
          Length = 1066

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 93/469 (19%), Positives = 176/469 (37%), Gaps = 39/469 (8%)

Query: 28  MIIADVLARF--HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD 85
               D   R+   R  G+ V       +   +I +  +  G   K    ++         
Sbjct: 355 YSPVDDQGRYTEGRWKGVYVK------DADPEIIEHLKEKGYLVKAGTIEHKYPHCWRCK 408

Query: 86  VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
              I      R T++      ++  K I +  +             D    N  +     
Sbjct: 409 TPLI-----FRATDQWFLKVSKVKDKIIKENDEKVTWYPEWVKVRYDNGVMNSGDWVISR 463

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSG 203
              +         W  E+G  + + ++++ +      E   E I   E  NE +  ++  
Sbjct: 464 QRYWGIPLP---IWQAEDGEIYVVGSFKELVELAVAIEVDGERIELPEDYNEKLRVIEEK 520

Query: 204 LKDLSLSRKTFD-WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           L    L R   D + IK+          ++ VW D+      +  Y  N +    K WPA
Sbjct: 521 LGPEDLHRPYVDAFIIKVNGKEMKRVKDVVDVWFDSGIASWASLDYPRNKE-LFEKLWPA 579

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D  V G+D +   F++    + +    +P          +  KG+K+SKSLGN+I P EV
Sbjct: 580 DFIVEGEDQVTKWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEV 639

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++ G D  R++++      ++  +   GL   KR+   L N     V  +  M L ++D
Sbjct: 640 VQKEGRDPFRFYMLWATNPWENLRFSWKGLAQVKRMLNILWNVY---VLSATYMSLDNFD 696

Query: 375 GMIPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF-- 428
                P  F   E D  ILS  + +++++ E ++   + +A   + + V       Y   
Sbjct: 697 PTKLKPEEFPFREEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYTFVVEDLSRWYIRL 756

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++ W  +  +PD+ +   Y   +V   L  L+  F P +A +I+  +
Sbjct: 757 IRKRMWV-EGDDPDKLAA-YYTVWKVFDVLLRLMAPFTPYIAEEIYQNM 803



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I    + 
Sbjct: 40  PKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQ 99

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           A                      K F   N +   +   +L I   +D+   T +  + +
Sbjct: 100 ALGLKTKKDIETEIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDNPYMTIKNEYIE 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEE 162
           +     KK  +KG + K      +  R E    + EV      +   + +   PV+  E 
Sbjct: 160 SGWFTLKKAWEKGLLEKDKRVLHWCPRCETALAEHEVRGEYKVRKDPSIYVKFPVEGREN 219

Query: 163 E 163
           E
Sbjct: 220 E 220


>gi|307298670|ref|ZP_07578473.1| isoleucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915835|gb|EFN46219.1| isoleucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 1047

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 146/406 (35%), Gaps = 28/406 (6%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQHNPVQWMEEEGYFFRLS-- 170
               K  Y      RD+    ++ V        +G++ N   N V W      ++     
Sbjct: 407 YYARKSWYIKTTEYRDKMIEVNNSVNWYPKFVGEGRFGNWLENMVDWALSRDRYWGTPLN 466

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
            ++        +       +ER  E I   ++     +       + G ++   P+ ++ 
Sbjct: 467 VWKCDECGKLTAVGSRKELVERAIEDISEDIELHRPYVDDVHLRCECGGRMTRTPE-VID 525

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            W D+    +    Y      +     +PAD    G D     F+++   +  L    P 
Sbjct: 526 CWFDSGAMPVAQHHYPFENKDNFMGDLFPADFICEGIDQTRGWFYSLMSISTFLFGQSPY 585

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + ++  +   G+K+SKS GN +DP ++IE+ G D LR++L+          +D++G+
Sbjct: 586 KNVLVNNLVLDKNGQKMSKSKGNTVDPWKIIEKYGADTLRWYLLAVSPPWVPTKFDEEGV 645

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIREN 404
           K   +             ++   + + D            E D  I+S  + +++E+ + 
Sbjct: 646 KDTFSKFFGTLHSVFSFFTMYANVDNVDPGEFDLPVSEREEVDRWIISRLNTLVREVTDL 705

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           + +  + +++  +   V E   + Y    +         +          EV+  +A L+
Sbjct: 706 LNHYDMTKSVRAIQDFVVEEVSNWYVRRTRDRYWTSELDNSKKAAYLTLYEVLLTVAKLM 765

Query: 463 QAFVPKLANKIFDIL-------------FVADENRCFQSLDQRLKP 495
               P  A +IF  L              VADE+     L++R+  
Sbjct: 766 APIAPFTAEEIFRNLTHKEKESVHLEFYPVADESLIEPDLEKRMAA 811



 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N  P I H     + D + RF  + G  V    G D HG  +   
Sbjct: 38  EGSPEFVFFEGPPTANGMPGIHHVISRTLKDAVCRFKTMQGYQVKRKAGWDTHGLPVEIE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V +    ++ + + +   I  +    T E  +
Sbjct: 98  VEKQLGFSSKQEIEDFGIEKFNQKCKESVWKYESQWKKLTERIAYWIDMEHPYITMENDY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K+  DKG IY+G     Y  R        EV +G  
Sbjct: 158 IESVWWILKQYFDKGYIYEGHKIMPYCPRCGTPLASHEVAQGYK 201


>gi|265750752|ref|ZP_06086815.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263237648|gb|EEZ23098.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 875

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPTKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNANLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEDDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|312898858|ref|ZP_07758246.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620020|gb|EFQ03592.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 827

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y+     YP+   H+GH     I DV+AR+ R++G +VL   G D  G     AA
Sbjct: 30  GKPPYYVLEMFPYPSGNLHMGHVRNYTIGDVIARYRRMNGYNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  N       L +SY  D  + T  K ++   + +++ +  +G  Y
Sbjct: 90  IKRNIPPAEWTYDNIANMERQQKSLGLSYDWDREVATCHKDYYRWTQWIFELLYKRGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G          + V   + + +FF+++ Y D+LL   
Sbjct: 150 RKEAKVNWCDTCNTVLANEQVIDGK----CWRCDHDVVKKDLKQWFFKITDYADQLLDDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++   +       G
Sbjct: 206 KLLPGWPERVKTMQKNWIGRSEG 228



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 72/441 (16%), Positives = 138/441 (31%), Gaps = 42/441 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT--TEKRHHDTCRILW 110
           ++G                F  + +     +       YD    T              +
Sbjct: 331 DYGTGAVMGVAGHDQRDFEFCKKYNIPIHYVISDPTGEYDYENATEAYTGEGVLMNSGEF 390

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
             +S +                +   N          Q Y     PV + E+ G      
Sbjct: 391 DGLSIEAGKKAITKWLEAHNCGKGTVNFRLRDWLISRQRYWGAPIPVVYCEKCGEQLVTE 450

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                 L    +     +     +E  S     +     +R+T         D       
Sbjct: 451 EQLPVELPTDVAFTAGAVSPLATSEKFSHCTCPVCGGPATRET---------DTMDTFVC 501

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLS 281
                  Y             KA  W   D ++ G +    H +Y          A L+ 
Sbjct: 502 SSWYYLRYTDARNEKAPWSREKADHWMNVDQYIGGIEHAILHLMYSRFLMKVFRDAGLVE 561

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A+ P  +++ + G +L +G K+SKS GNV+ P E++ + G D  R F++      +D  +
Sbjct: 562 ASEPF-ERLLTQGMVLKEGSKMSKSKGNVVSPEEILSKYGADTARLFILFAAPPERDLDW 620

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
              G++            N V R V            +   ++E+D+++  V    + +I
Sbjct: 621 SDKGVEGSYR------FLNRVWRIVHQFADIAKTAEVSKDIYSEADKALRLVEYTSVAKI 674

Query: 402 RENMQ----NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +++Q    N  ++ A++ V+  V+ +  Y            +  +      V  E    
Sbjct: 675 TDDIQGDDGNYALNTAVSAVMEFVNAMHAYV---------GEDKGQLHA--DVADEANEN 723

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  LL  F P +A +++ I+ 
Sbjct: 724 LLRLLAPFTPHIAEELWSIIG 744


>gi|256545768|ref|ZP_05473124.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase)(IleRS)
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398464|gb|EEU12085.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase)(IleRS)
           [Anaerococcus vaginalis ATCC 51170]
          Length = 1059

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 73/458 (15%), Positives = 156/458 (34%), Gaps = 31/458 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +      ++ F    D  G              K   D N   F  + D   +    + +
Sbjct: 354 YQLGRKYNLPFVQPVDLEG-----CFTETPWKGKFIFDTNEEIFIHLRDEGKV----YKK 404

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            T + ++  C      +          Y     L ++   N++ V             N 
Sbjct: 405 QTIEHNYPHCWRCKTPL--VYYAKPSWYIEMSKLSEKMVENNNGVNWYPQTIGDKRFGNW 462

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +++              L   +          R+       +   +D+ L R   D 
Sbjct: 463 LENVKDWAISRSRYWGTPLNLWRCDDCGHVESIGSRKELAEKAREDISEDIELHRPYVDD 522

Query: 217 GIKIPDDPQYIMY-------VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                 +   +M+       VW D+     +   Y          ++PAD    G D   
Sbjct: 523 VTLTCPECGKVMHRVPDVIDVWFDSGAMPFSQVHYPFAKGEDFENYFPADFICEGIDQTR 582

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + +++   P    + +   +   G+K+SKS GN ++P E+ ++ G DA+R+
Sbjct: 583 GWFYSLMAISTIITGKAPYKNVLVNDLVVDKNGQKMSKSKGNTLNPFELFDKYGADAVRF 642

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY----DGMIPTPGAF 383
           + +    C     +D+ GL +  N +    I N+ +  V     D     +         
Sbjct: 643 YSLYVSPCWVPTKFDEKGLIEVKN-NFFRTIENVYNFFVLYANTDNIGLDEIKNFENVEL 701

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT 439
            E D+ + S  + +L+   E M++   ++ +  V   V     + Y   + ++ W    T
Sbjct: 702 EEIDKWLYSRLNSLLKAYYEQMESFDYNKVVHLVNDFVVEDLSNWYIRRNRKRFWREDLT 761

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +A  V     +V+  L+ +     P ++ +I+  L
Sbjct: 762 ESKKA--VYKTCFDVLLSLSKMTAPIAPFISEEIYRNL 797



 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E+  I       N +P I H     + D+ +R+  + G  VL   G D HG  +   
Sbjct: 60  EDAEEYIIYDGPPTANGKPGIHHVIARTLKDMTSRYKNMMGFKVLKKAGWDTHGLPVEIE 119

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRH 102
            +                       K  V + S  +RDM+D +   Y  D+   T +  +
Sbjct: 120 VEKELGFTEKDQIEKYGVEKFNQKCKDSVFKYSDMWRDMSDRMAFLYDMDNPYITLDNDY 179

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +T   L  +   KG IY+G     Y  R        EV +G             +  E 
Sbjct: 180 IETEWWLLNEAFKKGLIYEGAKVMPYCPRCGTGLASHEVAQGYQMDKAITLICKFKKKEA 239

Query: 163 EGYFF 167
           +  +F
Sbjct: 240 DNEYF 244


>gi|260887099|ref|ZP_05898362.1| isoleucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330839126|ref|YP_004413706.1| Isoleucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260863161|gb|EEX77661.1| isoleucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746890|gb|AEC00247.1| Isoleucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 1039

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 72/464 (15%), Positives = 147/464 (31%), Gaps = 28/464 (6%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
               D+ F    D  G+  A           VFV               + +   +    
Sbjct: 335 CRKYDMPFVQFVDAKGEMTADTD-----WPGVFVKDADPLILQDLKEKGLLFKAPVFEHS 389

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
             H   C       + +    K         RDE   N+D V    +        + ++ 
Sbjct: 390 YPHCWRCDTPLVYYARESWFIKMTAV-----RDELIANNDTVNWIPESIGKGRFGDWLEH 444

Query: 160 MEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           +++ G      +   L+ ++      +       L     N             +++ + 
Sbjct: 445 VQDWGISRNRYWGTPLNIWECGCGHQHSIGSIEELKSLSDNCPEELELHRPYVDAVTIRC 504

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
            + G ++   P+ ++  W D+ +       Y         + +PAD      D     F+
Sbjct: 505 TECGEEMHRVPE-VIDCWFDSGSMPFAQWHYPFENKEIFERRFPADFISEAVDQTRGWFY 563

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   + LL    P    +         G K+SKS GN +DP++ + + G DA+R++   
Sbjct: 564 SLIAISTLLFHKAPYKNVIVLGHVQDENGRKMSKSKGNAVDPMDALRKHGADAIRWYFYE 623

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----- 386
             A      Y  DG  +         + N  +  V  +  + D   P   A         
Sbjct: 624 NSAPWLPNRY-HDGAVQEGQRKFMGTLWNTYAFYV--LYANIDNFNPLDHALDYEKLAVM 680

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ ILS  + +++ + EN+    +  A   + S V E+ + Y    +     K   +   
Sbjct: 681 DKWILSRLNTMVKAVDENLAAYKVTEAAKALQSFVDELSNWYVRRSRERFWAKGEGEDKV 740

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +   A      +P +   I+  +  + +    +S+
Sbjct: 741 NAYMTLYTALVTTAKAAAPMIPFMTEAIYQNIVCSIDKEAPESI 784



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E           N +PHIGH    +I D+L R+  + G  VL   G D HG  +    
Sbjct: 38  GKENFTFYDGPPTANGKPHIGHVLTRVIKDMLPRYQSMKGKRVLRKAGWDTHGLPVELEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHH 103
           + A                     +  V +    + + +DV+    D      T E    
Sbjct: 98  EKALGLDGKDQIEKYGMEPFIKKCRESVWKYKGMWEEFSDVVGFWADMEHPYITYENDFI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++     K+I  +G +YKG     Y  R     +  EV +G  
Sbjct: 158 ESEWWALKEIWKRGLLYKGYKVVPYCPRCGTPLSSHEVAQGYK 200


>gi|212694501|ref|ZP_03302629.1| hypothetical protein BACDOR_04029 [Bacteroides dorei DSM 17855]
 gi|212663002|gb|EEB23576.1| hypothetical protein BACDOR_04029 [Bacteroides dorei DSM 17855]
          Length = 875

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPTKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNANLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEDDTEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|294778918|ref|ZP_06744334.1| valine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447227|gb|EFG15811.1| valine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 875

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNTNLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|294783391|ref|ZP_06748715.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294480269|gb|EFG28046.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 859

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +E  Y+ + + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VAGKENYYVLSMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLQPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G+   ++   N  N R    ++  SYD    I +    ++   + L+K++ +KG 
Sbjct: 89  AAIQNGIHPAIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +    +    +++V    DG  +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCQTVLANEQV---EDGMCWRHSKTHVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 68/417 (16%), Positives = 136/417 (32%), Gaps = 77/417 (18%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +S K  + K           +  Y       G   Q Y     PV + E+ G     
Sbjct: 387 FNGLSSKDALIKIAEYVEEKNLGQRTYKYRLKDWGISRQRYWGTPIPVLYCEKCGEVLEK 446

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                 +L           P+E  N+              +        +   D      
Sbjct: 447 DENLPVILPDDIEFSGNGNPLETSNQFK----------EATCPCCGGKARRDTDTMDTFV 496

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y                 W P + ++ G +    H +Y   F         L
Sbjct: 497 DSSWYFLRYCDPKNLNLPFAKEIVDKWTPVNQYIGGVEHAVMHLLYARFFFKVLRDLGLL 556

Query: 281 SANLPL------------------------PKKVF---------SHGFILHKGEKISKSL 307
           +AN P                         PK V          S   +  K EK+SKS 
Sbjct: 557 TANEPFKRLLTQGMVLGPSYYSEKENRYLLPKDVVLKGDKAYSESGEELQVKVEKMSKSK 616

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP E++++ G D  R F++      K+  ++++GL          G    ++R   
Sbjct: 617 NNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGL---------AGAYRFLTRVWR 667

Query: 368 MILKDYD-----GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLV 421
           +I ++ +              ++ D+++L   ++ ++++ + ++N    + A+A  + L+
Sbjct: 668 LIFENAELVKNAHDEIDYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAIAANMELI 727

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +EV  Y           TN   +     +    ++++ ++L  FVP   ++I++ L 
Sbjct: 728 NEVQSYV----------TNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEELG 774


>gi|290968885|ref|ZP_06560422.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781181|gb|EFD93772.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 826

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+     YP+   H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 31  RPPYYVLEMFPYPSGNLHMGHVRNYTIGDVMARYRRMKGFNVLHPMGYDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N  N       L +SY  D  + T  + ++   + +++    +G  Y+
Sbjct: 91  KHNIPPAEWTYKNIENMTRQQRELGLSYDWDREVATCHEEYYKWTQWIFELFYKRGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G           PV   + + +FF+++ Y D+LL   +
Sbjct: 151 KEAKVNWCEHCNTVLANEQVIDGT----CWRCDQPVVKKDLKQWFFKITDYADQLLEDLK 206

Query: 182 SHPEFILPIERRNEVISFVKSG 203
             P +   ++   +       G
Sbjct: 207 LLPGWPERVKTMQKNWIGRSEG 228



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 109/299 (36%), Gaps = 45/299 (15%)

Query: 206 DLSLSRKTFDWGIKIP-------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-P 257
            L+ SR+                 D              Y          +   AK W  
Sbjct: 470 PLATSREFVHCTCPKCGGPATRETDTMDTFVCSSWYYLRYTDARNTAQAWNPEYAKKWLG 529

Query: 258 ADLHVIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            D ++ G +    H +Y    +       L A     +++ + G +L  G K+SKS GNV
Sbjct: 530 VDQYIGGIEHAILHLMYSRFCMKVFHDAGLVAVKEPFERLLTQGMVLMDGSKMSKSKGNV 589

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           + P ++I + G D  R F++      +D  + + G++              + R   ++ 
Sbjct: 590 VSPEDIIAKYGADTGRLFILFAAPPERDLEWSEQGVEGS---------YRFLHRVWRIVE 640

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQ----NQLIHRALAQVISLVSE 423
           +  D +     A   +TE+++++       + ++ E++Q        + A++ ++  V+ 
Sbjct: 641 QYMDMLDTAETAKRPYTEAEKALRRQEFLSIAKVGEDIQGRDGKYSFNTAVSSIMEYVNA 700

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  Y               +  T+   V VE IR L  +L  F P +A +++     + 
Sbjct: 701 LYAY-------------AGKEKTIQKEVGVEAIRNLLKILAPFTPHIAEELWHQAGFSG 746


>gi|154505673|ref|ZP_02042411.1| hypothetical protein RUMGNA_03212 [Ruminococcus gnavus ATCC 29149]
 gi|153794112|gb|EDN76532.1| hypothetical protein RUMGNA_03212 [Ruminococcus gnavus ATCC 29149]
          Length = 1051

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/505 (13%), Positives = 157/505 (31%), Gaps = 36/505 (7%)

Query: 2   KEREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ 56
           + ++  Y++    Y          HI  A+    A+V          ++ F    DE G 
Sbjct: 306 QHKKAFYVTCD-NYVTLTDGTGVVHIAPAFGEDDANV------GRNYELPFVQLVDEKGD 358

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
             A+          VFV +         D   + +D        +   +    W+  +  
Sbjct: 359 MAAETPFAG-----VFVKKADPMVLKDLDERGLLFD------APKFEHSYPHCWRCDTPL 407

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEEEGYFFRLS- 170
               +  +    +   E    ++            G++ +   N   W      ++    
Sbjct: 408 IYYARESWFIKMTAVKEDLIANNNTINWIPENIGKGRFGDWLENVQDWGISRNRYWGTPL 467

Query: 171 -AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
             ++ +    +       L     N              ++    + G ++   P+ ++ 
Sbjct: 468 NIWECECGHMHSIGSIAELKEMSDNCPDDIELHRPYIDDVTITCPECGKQMHRVPE-VID 526

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLP 287
            W D+ +       Y    +    + +PAD      D     F+++   + LL    P  
Sbjct: 527 CWFDSGSMPFAQHHYPFENEDLFKQQFPADFISEAVDQTRGWFYSLLAISTLLFNKAPYK 586

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +         G+K+SKS GN +DP + +E  G DA+R++     A      +    + 
Sbjct: 587 NVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWYFYSNSAPWLPNRFHGKAVV 646

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405
           +     +           +   +  +D    T         D+ +LS  + + + + E++
Sbjct: 647 EGQRKFMGTLWNTYAFFVLYANIDGFDATKYTLEYDKLGVMDKWLLSKLNTLTKTVDEHL 706

Query: 406 QNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            N  I  +   +   V ++ + Y    +     K                +  ++ +   
Sbjct: 707 ANYRIPESARALQDFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTVSKVAAP 766

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
            +P +  +I+  L  + +    +S+
Sbjct: 767 MIPFMTEEIYQNLVKSVDASAPESI 791



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M+E+E       Y        N +PHIGH    +I D++ R+  + G  V    G D HG
Sbjct: 32  MEEKEGCPEYTFY--DGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYKVPRKAGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--R 96
             +    +                       K  V +    + D +  +    D      
Sbjct: 90  LPVELEVEKLLGLDGKDQIEGYGLEPFIDKCKESVWKYKGMWEDFSSTVGFWADMEHPYV 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           T +    ++     K+I DK  +YKG     Y  R     +  EV +G  
Sbjct: 150 TYDNNFIESEWWALKQIWDKKLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 199


>gi|269140441|ref|YP_003297142.1| valyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267986102|gb|ACY85931.1| valyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560234|gb|ADM42898.1| Valyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 951

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 85/516 (16%), Positives = 164/516 (31%), Gaps = 98/516 (18%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
              G   +  T   +             +   +  D N R+   + D   +  D +   +
Sbjct: 269 MEKGTGCVKITPAHDFNDYEVGRRHQLPMINILTFDANIRDQAQVLDTNGVECDAY---S 325

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++   +           +G              DEA    +         Y +     ++
Sbjct: 326 DELPAEF----------RGMERFAARKAIVKACDEAGLLVEIKPHDLTVPYGDRGGVVIE 375

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG- 217
            M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   WG 
Sbjct: 376 PMLTDQWYVRAAPLAKPAIEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWWGH 433

Query: 218 -IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLDNP 248
            I    D    +YV                            W  +     +T G+ +N 
Sbjct: 434 RIPAWYDADGRVYVGRSEEEVRSENGLGAEVTLTQDNDVLDTWFSSALWTFSTLGWPENT 493

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKG 300
           D  K    P ++   G DI+ F         +           +P      +      +G
Sbjct: 494 DALKTFH-PTNVLTSGFDIIFFWIARMIMMTMHFIKDDDGKPQVPFKTVYITGLIRDDEG 552

Query: 301 EKISKSLGNVIDPIEVIEEV-------------------------------------GVD 323
           +K+SKS GNVIDP+++I+ +                                     G D
Sbjct: 553 QKMSKSKGNVIDPLDMIDGISLPALLEKRTGNMMQPQLAEKIAKRTEKQFPDGIEPHGTD 612

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGA 382
           ALR+ L    + G+D  +D   L+     +  N + N  SR V M  + +D         
Sbjct: 613 ALRFTLSALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGHDCGFNDGEKV 669

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
           ++ +D  IL+  +R ++ +RE + +     A   +         D Y +  KP  +   +
Sbjct: 670 YSLADRWILAEFNRTVKAMREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-AINGGS 728

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   +  V V+  L  L    +P +   I+  
Sbjct: 729 DAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRETKGSMWHLRYPL 204


>gi|221126343|ref|XP_002166348.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 904

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + + YP+ + H+GH     I D+LAR+ R++G +VL   G D  G     A
Sbjct: 41  KPKKKFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRMNGHNVLMPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 101 ALKNKVPPAKWTYENIAYMKGQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLEKGIA 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL +
Sbjct: 161 YRKTQVVNWDPVDQTVLANEQVIDGKG----WRTGAVVEKREIPGYYLKITDYAQELLDH 216

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   +        + V    ++ +      R  F   IK
Sbjct: 217 VQMGNDNATLTGWPDRVRLMQENWIGKSEGVRFAFTHDIK 256



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 28/209 (13%)

Query: 286 LPKKV--------FSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            PK V             I ++G   +SKS  N +DP E+I + G D  R + +      
Sbjct: 627 WPKDVEHVADGMLPVGTAIDYEGVGTMSKSKNNGVDPQELIAKYGADTARIYTMFTSPPE 686

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-----ESIL 391
               ++   ++          + N   +  +M        +    +  + +     +++ 
Sbjct: 687 ATLEWNDSAVEGSYR--FLRRVWNFGYKLSAMDSVAARASVAGAKSLNDVEFGKEAKALR 744

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                VL+++  + Q    +  ++  + +++ ++ +         K  +   A       
Sbjct: 745 LEMHTVLKQVDFDYQRMQYNTVVSGAMKMINALEGF---------KAMDSAGAQVA---L 792

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +E    L   L    P L++ ++  L  A
Sbjct: 793 IEGFGILLRCLYPATPHLSHALWSELGYA 821


>gi|303325705|ref|ZP_07356148.1| valine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863621|gb|EFL86552.1| valine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 888

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 140/376 (37%), Gaps = 24/376 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAY 172
              G  Y+        +  + +    ++   A           P  W++   ++   +  
Sbjct: 341 HAVGHCYRCHTVVEPHVSPQWFVATTKMAPSARAAVPELTRIFPESWLKTYYHWLDNTRD 400

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                  +  H       +   ++I   ++              G    +  + ++  W 
Sbjct: 401 WCISRQIWWGHRIPAWTCKACGKLIVAEEAPDVC-------PVCGSDHLEQDEDVLDTWF 453

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFS 292
            +     +T G+ +      A+++P  + V G DI+ F    W A ++   L   K+V  
Sbjct: 454 SSALWPFSTMGWPEQTR-DLARWYPTSVLVTGFDIIFF----WVARMMMMGLHFMKQVPF 508

Query: 293 HGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
               LH       G K+SKS GNVIDP+ +IE+ G D+LR+ L    A G+D    ++ +
Sbjct: 509 RDVYLHALVRDATGRKMSKSTGNVIDPLLMIEKYGCDSLRFTLTAFAAMGRDIRLSEERI 568

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +        N + N    ++  + ++    +          + IL        ++ + + 
Sbjct: 569 EG--YRHFVNKLWNAARFALMNLPEEAPASVNLENVRGLHHQWILQRLEMAKLDMDQALA 626

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +   + A       +     D Y +  KP +++  +P R +   YV   V+R+L +LL  
Sbjct: 627 DYRFNDAAQLGYKFLWNEFCDWYLELIKP-DMQSDDPARKAAAQYVLWLVLRELLVLLHP 685

Query: 465 FVPKLANKIFDILFVA 480
            +P +  +I+  L V 
Sbjct: 686 IMPFVTAEIWRALPVP 701



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 53/159 (33%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA  + + DVL R  R  G +VL+  GTD  G       + 
Sbjct: 37  EPYSIVIPPPNVTGALHIGHALNLTLIDVLCRHARQKGKNVLWVPGTDHAGIATQNVVER 96

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHD 104
           A                      +         +    L  S D     F  T ++    
Sbjct: 97  ALAKEGKTRRDLGREAFVEKVWEWRADYGHRILNQIGALGCSVDWTRLRF--TMDEGLSA 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ D+G IYKG Y   +  R      DDEV  
Sbjct: 155 AVRKVFVQLYDEGLIYKGHYIINWCSRCHTALADDEVEH 193


>gi|258592110|emb|CBE68415.1| leucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 864

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y+     YP+ + H+GH     I DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  ERRKFYLLEMYPYPSGRIHMGHVRNYAIGDVLARFLRMRGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R     +  SYD    I  ++  ++   + L+ K+ +KG +Y
Sbjct: 91  IEHRTQPARWTSDNIAYMRTQLKRMGFSYDWQREITCSDPAYYRWGQWLFLKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +    +    +++V    +G         V   E  G+FFR++AY D+LLS  
Sbjct: 151 KKSSAVNWCEVCQTVLANEQV----EGGLCWRDGTSVVQKELPGWFFRITAYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +  P++           G
Sbjct: 207 DNLSGWPEPVKVMQRNWIGKSVG 229



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 92/266 (34%), Gaps = 57/266 (21%)

Query: 255 FWPADLHVIGKDILRFHAIYWPAF-------------------------------LLSAN 283
           + P D ++ G +    H +Y   F                                    
Sbjct: 528 WMPVDQYIGGIEHAVLHLLYARFFTKAVRDLGLIAVDEPFRRLLTQGMVCKETYRCAEHG 587

Query: 284 LPLPKKVFSHGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             LP++V +       G         K+SKS  NV+DP +++ + G D  R F +     
Sbjct: 588 FRLPEEVDASSCCRACGRPVKIGRIEKMSKSKKNVVDPEDLLTQYGADTARIFCLFAAPP 647

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G++          I  L+    +++    +           +  ++     
Sbjct: 648 ERDLEWSDQGVEGSFR--FLCRIVRLIEDQEALLK---EPNPSIAFQKLIAGRALYRKAQ 702

Query: 396 RVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKK--TNPDRASTVLYVTV 452
           + ++ + E+++ +   + A++ ++ L +E+ R+       EL     + D         V
Sbjct: 703 QTIKRVTEDIEDDFHFNTAISALMELANEIGRF-------ELVGSADDADERRVAYSYAV 755

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E    L +LL  F P L  ++++ L 
Sbjct: 756 E---TLLLLLSPFAPHLCEELWERLG 778


>gi|110804709|ref|YP_688229.1| leucyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110614257|gb|ABF02924.1| leucine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 891

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 61  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA 120

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 121 AVKHHTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 180

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 181 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 236

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 237 LDKLDHWPDTVKTMQRNWIGRSEG 260



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 534 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 593

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 594 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 653

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 654 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 707

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 708 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 767

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E ++ +  +L  F P +   ++  L      +
Sbjct: 768 -----AKAP-----TDGEQDRALMQ---EALQAVVRMLNPFTPHICFTLWQELKGEGDID 814

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 815 NAPWPVADEK 824


>gi|83319485|ref|YP_424244.1| valyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|83283371|gb|ABC01303.1| valyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 872

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/348 (19%), Positives = 131/348 (37%), Gaps = 37/348 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+   W
Sbjct: 353 VEPYLSDQWFVKMDKFKNMVIDLQNSDNKINFFPNRFSDVLNRWMTNAHDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           Q ++  W  +     +T     + +    
Sbjct: 412 GHQIPCWYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKDLESEYF 471

Query: 254 KFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           K + P  + V G DI+ F    + +     +  +P    +           K+SKSLGN 
Sbjct: 472 KNYFPTSVLVTGYDIIFFWVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI   G D+LR FL+     G+D  Y  + +    N    N + N  SR V + L
Sbjct: 532 IDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKILASWN--FINKLWN-ASRYVFLNL 588

Query: 371 KDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
            D+    P         +++ IL+  S+    + E M       A   +   V       
Sbjct: 589 DDHFEFDPNFYKTDLEITNQWILTQLSKTQAYVYEKMNKYEFSLAGNHLWDFVWNKYCSW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  K   +  +N             V++++ I+L   +P ++ +I+
Sbjct: 649 YIEFSK---VNLSNDKFNYQTKQTLFYVLKEILIMLHPLIPFVSEEIY 693



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K  I         + HIGHA++  + D + RF +L G D LF  G D  G      
Sbjct: 34  SKKPKFSIILPPPNVTGKLHIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSGISTQVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R+    L +S D      T ++  +
Sbjct: 94  VEQKLKKQGIDKNKLGREKFLLEAWKWKEEYASIIREQWAKLGLSLDYSTEKFTLDEDIN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ K  +   IYK      +    +   ++ EV  
Sbjct: 154 QIVKEIFVKFYNDKIIYKDKQIVNWDPEQKTAISNVEVIY 193


>gi|169343338|ref|ZP_02864348.1| isoleucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298636|gb|EDS80717.1| isoleucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 1039

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 135/434 (31%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L +++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDNFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|212709904|ref|ZP_03318032.1| hypothetical protein PROVALCAL_00954 [Providencia alcalifaciens DSM
           30120]
 gi|212687416|gb|EEB46944.1| hypothetical protein PROVALCAL_00954 [Providencia alcalifaciens DSM
           30120]
          Length = 964

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 75/417 (17%), Positives = 142/417 (34%), Gaps = 89/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 387 IEPMLTDQWYVRTAPLAKDAIKAVEDGRIQFVPRQYENMYFSWMRD-IQDWCISRQ-LWW 444

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 445 GHRIPAWYDDKGNVYVGRDEDEVRRENNLGADVALRQDDDVLDTWFSSGLWTFSTLGWPE 504

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 505 NTDALKTFH-PTDVLVSGFDIIFFWIARMIMMTMHFIKDENGEPQVPFKTVYMTGLIRDE 563

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 564 EGQKMSKSKGNVIDPLDMIDGISLEALLEKRTGNMMQPQLAEKIAKRTRKEYPDGIEAHG 623

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  +  D       
Sbjct: 624 TDALRFTLAALASTGRDINWDMKRL--SGYRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 680

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            +F+ +D  I++  ++ ++  RE +       A   +         D Y +  KP  + K
Sbjct: 681 MSFSLADRWIMAQFNQTVKAYREALDTHRYDIAAGILYDFTWNEFCDWYLELSKP-AVHK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
            N  +     +  +EV+  L  L    +P +   I+  +     +  +    Q+  +
Sbjct: 740 GNEAQVRAARFTLIEVLEGLLRLAHPIIPFITETIWQRVKVVKGIEADTIMLQAFPE 796



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +           H+GHA++  I D + R+ R+ G + L+ TGTD  G      
Sbjct: 43  TSKDSFCVVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTDHAGIATQMV 102

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + D +D   + F  T ++
Sbjct: 103 VERKIAAEEGKNRHDYGRDAFIDKIWEWKAESGGTISQQMRRLGDSVDWDRERF--TMDE 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 161 GLSKAVKEAFVRMYKENLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 217


>gi|168213467|ref|ZP_02639092.1| isoleucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170715027|gb|EDT27209.1| isoleucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 1039

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 135/434 (31%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINIPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L +++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDNFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|152984266|ref|YP_001346664.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150959424|gb|ABR81449.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 950

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRSKHQLGNDVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|18311523|ref|NP_563457.1| isoleucyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|81766399|sp|Q8XHE4|SYI_CLOPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18146207|dbj|BAB82247.1| isoleucine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 1039

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 135/434 (31%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L +++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDNFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|322367954|ref|ZP_08042523.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551970|gb|EFW93615.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 1065

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 71/409 (17%), Positives = 139/409 (33%), Gaps = 35/409 (8%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
               G  ++        + D+ +    ++ +       +++ +P +  +E    F     
Sbjct: 395 HHSYGHCWRCDTGILQIVTDQWFITVTDIKEELLDNIDDSEWHPQEARDERFRNFV---- 450

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI----- 227
           ++           + +PI                +  +R+     +    DP+ +     
Sbjct: 451 ENSPDWNVSRQRYWGVPIPIWTPENWDGSMDDVVVVGTREELAEAVDQDVDPEDVDLHRP 510

Query: 228 --------------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                                 VW+D+      T  Y  NPD    + WPADL +   D 
Sbjct: 511 TVDDLTITKDGTTYTRVPDVFDVWLDSSVASWGTLDYPSNPD-DFEELWPADLIMEAHDQ 569

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F +           +P  + +     +   G K+SKS+GN++ P E IE  G D +
Sbjct: 570 TRGWFWSQLGMGTAALDEVPYDEVLMHGWALAEDGRKMSKSIGNIVSPEEAIERHGADPM 629

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNA-DLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           R FL+ +   G+D  +  D ++    + ++   +       + +   D D +        
Sbjct: 630 RLFLLSQNPQGEDMRFSWDEMQNMQRSLNILWNVFRFPLPYMRLDGFDPDEVDVQDAETE 689

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKPWELKKTNPD 442
             DE +LS    V  E+ E+  +    +AL  ++  V E V R Y    +     + +  
Sbjct: 690 LVDEWLLSRLQTVTTEMTEDWDDFRQDKALRTLLDFVVEDVSRFYIQVVRERMWDEADSA 749

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                      V+++L  LL  F P ++  I+  L   +       LD 
Sbjct: 750 SKQAAYATFYHVLKELVALLAPFAPFVSEDIYQNLTGDEGEESVHMLDW 798



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 19/187 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ +      Y +   H+G  +   + D   R+ R+ G DV    G D HG  I    + 
Sbjct: 41  ERFFFVDGPPYTSGAAHMGTTWNKSLKDTYIRYKRMRGYDVTDRPGYDMHGLPIETKVEE 100

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 K F +       +      +   +D+  +T    + + 
Sbjct: 101 RLGFENKKDIEEFGMENFIEECKEFANDQLDAMDEDFKSFGVWMDWDNPYKTLSPEYMEA 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
               +++  ++G + +G  S     R E    ++EV              P++  E    
Sbjct: 161 AWWGFQRAHERGLVEQGMRSISQCPRCETAIANNEVEYEDVDDPSIYVKFPLRDREGSLV 220

Query: 166 FFRLSAY 172
            +  + +
Sbjct: 221 AWTTTPW 227


>gi|301630146|ref|XP_002944188.1| PREDICTED: leucyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 908

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 92/240 (38%), Gaps = 12/240 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA
Sbjct: 31  GKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     +   I +   + T +  ++   + L+ ++ +KG  Y
Sbjct: 91  LKNKVPPAQWTYDNIACMKGQMQAMGLAIDWSREVATCDPDYYRWNQWLFLRMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLKITDYAQELLDHV 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW------GIKIPDDPQYIMYVWIDA 234
           +   +        ++V    ++ +      R  F        G  I D   Y+     D 
Sbjct: 207 QIGNDKATLTGWPDKVRLMQENWIGKSVGVRFAFTHDIRGADGQPIQDGRMYVFTTRADT 266



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 117/355 (32%), Gaps = 39/355 (10%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D  V     G+    + + +    +  ++F          +   +  ++ +P+++    I
Sbjct: 498 DARVACPCCGKSARRETDTMDTFVDSSWYFMRYCDPKNATAMVANGTDYWMPMDQYIGGI 557

Query: 198 SF-VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
              +   L     ++   D G+    +P   +      L              G K  FW
Sbjct: 558 EHAILHLLYARFWTKVMRDLGLIQVAEPFTKLLTQGMVL----NHIYSRRTAQGGKDYFW 613

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHKG-EKISKSLGNV 310
           P D+          H       ++ A L  P +     +     I ++G   +SKS  N 
Sbjct: 614 PHDVE---------HLHDETGKIIGARLKHPAESSDGLLDVGTPIDYEGVGTMSKSKNNG 664

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP ++IE+ G D  R + +          ++   ++          + N   R   +  
Sbjct: 665 VDPQQLIEKYGADTARLYTMFTGPPELTLEWNDAAVEGSYR--FLRRVWNFAGRLTXLDQ 722

Query: 371 KDYDGMIPTPGAFTESD-----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              D  +       +       +++      VL++++ + Q    +  ++  + +++ + 
Sbjct: 723 VGTDASVAGYTRLKDVQFGPGAQALRREIHTVLKQVQYDYQRMQYNTVVSGAMKMINAL- 781

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                    E  K + D  + V    +E    L  +L    P + + ++  L  A
Sbjct: 782 ---------EDFKAHGDAGAPV--ALIEGFGILLRVLYPATPHITHGLWSQLGYA 825


>gi|254774539|ref|ZP_05216055.1| valyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 882

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 121/365 (33%), Gaps = 52/365 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        ++V   + D  +SR+   
Sbjct: 360 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPTSMEPRWFAWVDD-MHDWCISRQ-LW 417

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 418 WGHRIPIWYGPNGEQRCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTLGWPEKTP-ELE 476

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 477 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDES 536

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 537 GRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAIGEDHV--RASRNFCTKLF 594

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   +       + P     T++D  IL     V  E+     N    RA   +  
Sbjct: 595 N-ATRYALLNGAQLAQLPPL-DELTDADRWILGRLEEVRAEVDSAFDNYEFSRACESLYH 652

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT      T    V    +  L  LL   +P +   ++  
Sbjct: 653 FAWDEFCDWYVE------LAKTQLAEGITHTTAVLATTLDTLLRLLHPVIPFITEALWQA 706

Query: 477 LFVAD 481
           L   +
Sbjct: 707 LTGNE 711



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 40  SDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSV 99

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 100 VEKQLAVDGKTKEDFGRELFIEKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 158 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTALSDIEVNY 199


>gi|15669196|ref|NP_248001.1| valyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501068|sp|Q58413|SYV_METJA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1591666|gb|AAB99009.1| valyl-tRNA synthetase (valS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 878

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 139/392 (35%), Gaps = 15/392 (3%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +      K  I       W+    +      EV         + +   + W+E+  + 
Sbjct: 335 QNVGVCWRCKTPIEIIVTEQWFVNVRKLIPKVREVADEIKWIPEHMKIRLLNWIEDMDWD 394

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +         +      +    E    +          +     G K       
Sbjct: 395 WVISRQRIFATPIPVWYCPKCGNVVVAKEEDLPIDPTKTGYVCDKC----GNKDLIPETD 450

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+    +  T +LD+      K +P  L   G DI+R  A Y    +  L+   
Sbjct: 451 VLDTWMDSSITPMVITKWLDDDKF-FEKHYPVQLRPQGHDIIRTWAFYTIVKSVALTGKK 509

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+I + G DALR +       G D  +   
Sbjct: 510 PWDEIVINGMVFGEDGHKMSKSRGNVVEPDEIIAKYGADALRLW-ASNSVVGDDVQFLWK 568

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRE 403
            +             N    +   I  D    +  P   +   D  ILS   R+++ + +
Sbjct: 569 EVD--YGYRFLRKSWNACRFAKMHISDDIIDELKKPMEISNPIDLWILSKLQRLIERVDK 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +++N   +  + ++   V     D Y +  K + L   + +      +    VI ++  L
Sbjct: 627 DLENYRFNT-IVEIYKFVWHEFCDNYIEMVK-YRLYGDDEEAKKEARWTLYYVIDKVVRL 684

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L  F P  ++ I +I  + + +  F  +D R 
Sbjct: 685 LCPFAPHFSDYIAEIYKIDNLHFSFPEVDNRF 716



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  SNKPPYIIDTPPPYPTGRLHLGHALNWTYMDIIARYKRMKGFNVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                 +N    R     L IS  +D    T    +    
Sbjct: 91  VEEIHGITKSDVDRHKFRELCIELTKENIEKMRRQIKSLGISIDWDKEYITMTPEYIKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++   G IY+G +   +  R +
Sbjct: 151 QTAFVRMYKDGLIYRGKFPVNWCPRCQ 177


>gi|237711163|ref|ZP_04541644.1| valyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229455007|gb|EEO60728.1| valyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 875

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPTKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNANLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +K   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDKERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEDDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|213861579|ref|ZP_03386049.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 881

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 304 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 361

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 362 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 421

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 422 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 480

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 481 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 540

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 541 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 597

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 598 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 656

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 657 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 697


>gi|312136597|ref|YP_004003934.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224316|gb|ADP77172.1| valyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 876

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 133/376 (35%), Gaps = 20/376 (5%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           +   + G  ++        ++ + + + +++ K         + +P + M+       + 
Sbjct: 331 RIKQNVGRCWRCKTPVEILVKKQWFIDVNKLKKDVKKTINEIKWHP-EHMKTR-LLNWID 388

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL------SLSRKTFDWGIKIPDDP 224
           A +       +      +P+    E      +    L           T + G       
Sbjct: 389 AMEWDWCISRQRIFGTPIPVWYCKECGKPHVATEDMLPVDPTKEKPNFTCECGCNEFIPE 448

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSA 282
           + ++  W+D+  + L   G+         K +PA+L   G DI+R  A Y       L+ 
Sbjct: 449 RDVLDTWMDSSISPLVVAGWPQKNYR---KLFPANLRPQGHDIIRTWAFYTILRCKALTG 505

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  + V +       G K+SKS GNVI+P EV+E+ G DALR +       G D  + 
Sbjct: 506 EKPFDEIVINGMVFGEDGHKMSKSRGNVIEPEEVLEKYGADALRLW-AANSVPGSDVPFA 564

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              +K            N        I K+ +  +         D  ILS  +R+++ + 
Sbjct: 565 WKDVK--YGYKFLRKFWNAFRFMSIHIFKEEENEV--EAKLNYMDRWILSKLNRLVENVT 620

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +++       A+  +   V     D Y +A K       N +          +V++    
Sbjct: 621 KSINQYNFADAITNIQQFVWHVFCDEYIEAVKYRLYSDENKEMREGAKRTLEKVLKTCLK 680

Query: 461 LLQAFVPKLANKIFDI 476
           LL  FVP    +++  
Sbjct: 681 LLAPFVPHFVEEVYQH 696



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    I T   YP    H+GH    +  D++ARF R++G +VLF  G D HG       
Sbjct: 33  KRPSYVIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMNGFNVLFPQGWDCHGLPTEVKV 92

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
           +      K                 +N +  +     L  S  +D    T +  +    +
Sbjct: 93  EEIHNIKKGDVPREKFKKMCIDLTTENIKRMKRQMISLGFSQDWDREYITMDPEYIKKTQ 152

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDE 133
           + + K+  +G IY+G +   +  R E
Sbjct: 153 LSFLKMYKEGLIYRGVHPVNWCPRCE 178


>gi|330016474|ref|ZP_08308447.1| valine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328528835|gb|EGF55778.1| valine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 951

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  I++  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWIIAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|118463457|ref|YP_880951.1| valyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118164744|gb|ABK65641.1| valyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 882

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 121/365 (33%), Gaps = 52/365 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        ++V   + D  +SR+   
Sbjct: 360 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPTSMEPRWFAWVDD-MHDWCISRQ-LW 417

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 418 WGHRIPIWYGPNGEQRCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTLGWPEKTP-ELE 476

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 477 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDES 536

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 537 GRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAIGEDHV--RASRNFCTKLF 594

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  +R   +       + P     T++D  IL     V  E+     N    RA   +  
Sbjct: 595 N-ATRYALLNGAQLAQLPPL-DELTDADRWILGRLEEVRAEVDSAFDNYEFSRACESLYH 652

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT      T    V    +  L  LL   +P +   ++  
Sbjct: 653 FAWDEFCDWYVE------LAKTQLAEGITHTTAVLATTLDTLLRLLHPVIPFITEALWQA 706

Query: 477 LFVAD 481
           L   +
Sbjct: 707 LTGNE 711



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 40  SDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSV 99

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 100 VEKQLAVDGKTKEDFGRELFIEKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 158 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTALSDIEVNY 199


>gi|300113162|ref|YP_003759737.1| leucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539099|gb|ADJ27416.1| leucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 819

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMKGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N  + R     L  +YD    + T +  ++   + L+ K+  KG +Y
Sbjct: 91  IQNRVPPAQWTYENIGHMRKQLKRLGFAYDWSRELATCQPDYYHWEQWLFTKLFAKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F +++AY ++LL+  
Sbjct: 151 KKTALVNWDPVDQTVLANEQVIDG----RGWRSGALVERREIPQWFLKITAYGEELLTSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +            G
Sbjct: 207 DELTGWPEQVRAMQRNWIGRSEG 229



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 96/266 (36%), Gaps = 30/266 (11%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-- 282
              + ++   Y               +  +W P D ++ G +    H +Y   F      
Sbjct: 492 FDTFFESSWYYARYCCPDNNATMVDERGDYWLPVDQYIGGIEHAVLHLLYARFFHKVMRD 551

Query: 283 ------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 + P    + + G +L  G K+SKS GN +DP  +IE  G D  R F++      
Sbjct: 552 MGLVRSDEPFT-HLLTQGMVLKDGAKMSKSKGNTVDPQALIEHYGADTARLFIMFTAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   + + G++          +   V  +V ++       +    +       + +    
Sbjct: 611 QSLEWSESGVEGAHR--FLKRLWRTV--AVHVVEVSGVVPVLKVNSLNTEQRLVRTKVHE 666

Query: 397 VLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            + +  +++ +    + A+A V+ L++ + + F+   P         +   V     E +
Sbjct: 667 TITKASDDIGRRYTFNTAIAAVMELMNALAK-FEGLSP---------QGQAVRQ---EAL 713

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
             + +LL    P + ++++  L   +
Sbjct: 714 EAVVLLLSPITPHICHRLWRELGHRE 739


>gi|254236738|ref|ZP_04930061.1| valyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126168669|gb|EAZ54180.1| valyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 950

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 124/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N +       ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYEN-MYFSWMHDIQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           E +   I           H+G  +   I D L R+ R+ G + L+  GTD  G       
Sbjct: 29  EGQPYTILIPPPNLTGSLHMGSGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVV 88

Query: 60  ----------------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K     N  R  R +   +D S + F  T +   
Sbjct: 89  ERQLGAQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  +  + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 147 SEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|116749515|ref|YP_846202.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|166231649|sp|A0LK15|SYL_SYNFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116698579|gb|ABK17767.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 829

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  GREKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFLRMRGYNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             A      +  +N    R     L  SYD      T +  ++   ++ + K+ +KG  Y
Sbjct: 91  IKAKTHPARWTYENIAYMRSQLKQLGFSYDWSREFATCDVSYYRWEQLFFLKMYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V    +G        PV   E E +FF+++ Y ++LL Y 
Sbjct: 151 KRSAYVNWCGTCLTVLANEQV----EGGACWRCDQPVVQKEMEQWFFKITDYVEELLDYT 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
              P +   +    +       G
Sbjct: 207 HRLPGWPERVLTMQQNWIGKSLG 229



 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 35/242 (14%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEK 302
           K K+W P D ++ G +    H +Y   F+        L  + P  + + + G ++  G K
Sbjct: 526 KVKYWMPVDQYIGGIEHAVLHLLYSRFFVKVLRDMGALEVDEPF-RNLLTQGMVIKDGAK 584

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP ++I+  G D +R F +      KD  +   G++              +
Sbjct: 585 MSKSKGNVVDPDDMIKAYGADTVRLFCLFASPPEKDLEWSDQGVEGS---------FRFL 635

Query: 363 SRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
           SR   ++  + D +   P     GA  E  E++     + ++++ E++      + A+A 
Sbjct: 636 SRIWRLVSDNLDALRSAPRHNGGGALPEPLEALHRKTHQTIKKVTEDIRDRFHFNTAIAA 695

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ LV+++ +  +             RA  +  V  E +  L +L+    P +A +I+  
Sbjct: 696 IMELVNQIYQVVE----------GGSRAGNIWPVVKEAVEALILLVSPMAPHIAEEIWHE 745

Query: 477 LF 478
           L 
Sbjct: 746 LG 747


>gi|320175116|gb|EFW50228.1| Leucyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 860

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  K  +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKSLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKSMQRNWIGRSEG 229



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 103/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|262274982|ref|ZP_06052793.1| valyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221545|gb|EEY72859.1| valyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 952

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 78/418 (18%), Positives = 141/418 (33%), Gaps = 90/418 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   ++++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTATLAKPAVEAVENGDIQFVPKQYENMYFAWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +      T G+  
Sbjct: 432 GHRIPAWYDNDGNVYVGRNEEEVRAKHGLAPVVVLRQDEDVLDTWFSSALWTFGTLGWPQ 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEDQDCGMKGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            AF+ +D+ I S      +E   +++N  +  A   +   +     D Y +  KP  L K
Sbjct: 668 MAFSLADKWIESQFQLAAKEFNAHIENFRLDMAANTLYEFIWNQFCDWYLELTKP-VLWK 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
               +     +  + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 GTEAQQRATRHTLITVLEKTLRLAHPVIPYITESIWQSVKPLVDGVEGDTIMLQALPQ 784



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKAAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 YAAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDVKGHMWHFRYPL 204


>gi|297537782|ref|YP_003673551.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257129|gb|ADI28974.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 836

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+ + H+GH     I DVL+RFH++ G +V+   G D  G     A
Sbjct: 30  SDKPKYYCLSMFPYPSGRLHMGHVRNYTIGDVLSRFHKMKGFNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + +       L + ++  I T +  ++   + L+ ++  KG I
Sbjct: 90  AIKNNTAPAKWTYENIEHMKSQLKQLGLGVDWNREIATCKPEYYKWEQWLFTELFKKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G   +        V+  +   YF +++AY ++LL+ 
Sbjct: 150 YKKTSTVNWDPVDGTVLANEQVIDGRGWRSGAM----VEKRDIPQYFMKITAYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDGWPEQVKTMQRNWIGKSFG 229



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 98/239 (41%), Gaps = 28/239 (11%)

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHK 299
               +A +W P D +V G +    H +Y            L  N      + + G +L +
Sbjct: 532 MADERANYWLPVDQYVGGIEHAILHLLYARFFNKLMRDVGLIKNDEPFINLLTQGMVLKE 591

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN +DP E+I+  G D  R F++      +   +   G++       AN   
Sbjct: 592 GTKMSKSKGNTVDPQELIDTYGADTARLFMMFAAPPEQSLEWADSGVEG------ANRFL 645

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
             + ++    L+       T G  T   ++I       ++++ ++   +   + A++ V+
Sbjct: 646 RRLWKASYDHLELGQIAAYTTGDLTAELKAIRLQLHSTIEKVADDYGRRHSFNTAISSVM 705

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +++ + +         L+ ++         V  EV++ +A+LL   VP +   I+  L
Sbjct: 706 EMMNALAK---------LEGSDE----ITRSVRQEVLQNVALLLSPIVPHICQAIWAEL 751


>gi|297617834|ref|YP_003702993.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145671|gb|ADI02428.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 825

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y      YP+   H+GH     I DV+ARF  ++G +VL   G D  G     A
Sbjct: 30  KTKPKYYDLEMFPYPSGNLHMGHVRNYAIGDVVARFKTMNGYNVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   ++ D N  N +     L ISYD      T +  ++   + L+ K+ + G  
Sbjct: 90  AIKHGIHPSIWTDSNIENMKRQLKSLGISYDWTREFATCKPEYYRFTQWLFLKLYENGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +         +++V  G            V+    E +FF+++ Y ++LL+ 
Sbjct: 150 YKKKAAVNWCPSCATVLANEQVVDGD----CERCGTRVEKKSLEQWFFKITDYAERLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++   +       G
Sbjct: 206 LDKLPGWPEKVKIMQKNWIGRSEG 229



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 102/274 (37%), Gaps = 36/274 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D     +W P D ++ G +    H +Y   
Sbjct: 491 KRETDTMDTFVCSSWYYFRYCSPHVQDRPWDKEAVDYWMPVDQYIGGVEHAILHLMYSRF 550

Query: 278 FL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           F        L +       + + G +L  G K+SKS GN + P ++I   G D  R F++
Sbjct: 551 FTKVLYDLGLVSCEEPFTNLLTQGMVLKDGAKMSKSKGNTVSPEDIINTYGADTARLFIL 610

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
                 KD  +   G++         G    ++R   ++ +  + +            + 
Sbjct: 611 FASPPEKDLEWSDQGVE---------GCYRFLNRVWRLVAEYSNQVRGVEAYGGGSNLSA 661

Query: 386 SDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           +D  +       ++++ E+++     + A++ ++ LV+ + +Y          K N  + 
Sbjct: 662 ADRELRYRTHFTIKKVTEDIEKRFNFNTAISAIMELVNALYQY----------KDNEHQN 711

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V     E ++ L ++L  F P +A ++++ + 
Sbjct: 712 LAV---VKEALKALVLVLSPFSPHIAEELWEAIG 742


>gi|238892747|ref|YP_002917481.1| valyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545063|dbj|BAH61414.1| valyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 951

 Score =  156 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  I++  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWIIAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|327314648|ref|YP_004330085.1| valine--tRNA ligase [Prevotella denticola F0289]
 gi|326945879|gb|AEA21764.1| valine--tRNA ligase [Prevotella denticola F0289]
          Length = 897

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 133/385 (34%), Gaps = 59/385 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  LS          P + +N         +KD  +SR+   
Sbjct: 368 PIEPKLSTQWFLKMQHFADIALSPVMDDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 425

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     M  W  +   
Sbjct: 426 WGHRIPAYYFKDAEGKNATVVAETEEEALKLAQEINPSVTAADLEQESDCMDTWFSSWLW 485

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    +++PD  + + ++P    V G DI+ F    +    +      P     F+  
Sbjct: 486 PISVFDGINHPDNEEISYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKFPFKHVYFTGI 545

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 546 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 602

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++          P A   + E   +    V  E+ E  ++  I  AL
Sbjct: 603 ---FNNKIWNAFRLVQGWQTADTEQPQASRIAVEWFDAKLKAVNAEMDEQFRSYRISEAL 659

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P+    +  VT E        L  +L  F+P + 
Sbjct: 660 MTVYRL------FWDEFSSWYLEMIKPEYGKPIDTVTYEATLRFFNALLKMLHPFMPFIT 713

Query: 471 NKIFDILFVADENRCFQSLDQRLKP 495
            +++  L+   +       + RL  
Sbjct: 714 EELWQHLYDRKDGESIMRDELRLPA 738



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T ++    
Sbjct: 92  VNKLAQEGIKKTDLTREQFLEHAWDWTREHGGIILKQLRRLGCSCDWDRTAFTMDETRSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYNKGYIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|257466670|ref|ZP_05630981.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917824|ref|ZP_07914064.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691699|gb|EFS28534.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 854

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     
Sbjct: 31  VEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAEN 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G     +   N  N +    +L  SY  D  I +    ++   + ++KK+ +KG 
Sbjct: 91  AAIQNGAHPAKWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +    +    +++V    DG+ +      V   E E +FF+++ Y D+LL 
Sbjct: 151 VYKKKSLVNWCPDCKTVLANEQV---EDGKCWRHSKTAVIQKELEQWFFKITDYADELLE 207

Query: 179 YY 180
            +
Sbjct: 208 GH 209



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 138/386 (35%), Gaps = 85/386 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV + E+ G           +L           P+    E     K+
Sbjct: 421 WGVSRQRYWGTPIPVLYCEKCGEVLEKDENLPVMLPEDIQFSGNGNPL----ETSESFKN 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPA 258
                         G     D    M  ++D+   +L      +       K    + P 
Sbjct: 477 ATCPCC--------GGPARRDTD-TMDTFVDSSWYFLRYCDAQNKDLPFDKKIVDGWTPV 527

Query: 259 DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKV-------------------- 290
           D ++ G +    H +Y   F         LS+N P  + +                    
Sbjct: 528 DQYIGGVEHAVMHLLYARFFHKMLRDLGYLSSNEPFKRLLTQGMVLGPSYYSAAENRFLF 587

Query: 291 --------------FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                          +   ++ K EK+SKS  N +DP E+I + G D  R F++      
Sbjct: 588 AEEVELKGEKAFSKKTGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAAPPE 647

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSV 393
           K+  ++++GL          G    ++R   ++L++ D +      +T    +D++++  
Sbjct: 648 KELEWNENGL---------AGAYRFLTRVWRLVLENQDHISLEKIDYTAINKADKALIIK 698

Query: 394 CSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            ++ ++++ E+++ +   + ++A  + L+++V  Y                ++    V  
Sbjct: 699 LNQTIKKVTESIEDDYHFNTSIAATMELLNDVQAY-------------QSDSTQYTRVLG 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E ++Q+ I+L  FVP   +++++ + 
Sbjct: 746 EALKQIVIMLSPFVPHFCDELWESIG 771


>gi|257452950|ref|ZP_05618249.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059491|ref|ZP_07923976.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685167|gb|EFS22002.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 854

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     
Sbjct: 31  VEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAEN 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G     +   N  N +    +L  SY  D  I +    ++   + ++KK+ +KG 
Sbjct: 91  AAIQNGAHPAKWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +    +    +++V    DG+ +      V   E E +FF+++ Y D+LL 
Sbjct: 151 VYKKKSLVNWCPDCKTVLANEQV---EDGKCWRHSKTAVIQKELEQWFFKITDYADELLE 207

Query: 179 YY 180
            +
Sbjct: 208 GH 209



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 138/386 (35%), Gaps = 85/386 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV + E+ G           +L           P+    E     K+
Sbjct: 421 WGVSRQRYWGTPIPVLYCEKCGEVLEKDENLPVMLPEDIQFSGNGNPL----ETSESFKN 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPA 258
                         G     D    M  ++D+   +L      +       K    + P 
Sbjct: 477 ATCPCC--------GGPARRDTD-TMDTFVDSSWYFLRYCDAQNKDLPFDKKIVDGWTPV 527

Query: 259 DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVF------------------- 291
           D ++ G +    H +Y   F         LS+N P  + +                    
Sbjct: 528 DQYIGGVEHAVMHLLYARFFHKMLRDLGYLSSNEPFKRLLTQGMVLGPSYYSAAENRFLF 587

Query: 292 ---------------SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                          +   ++ K EK+SKS  N +DP E+I + G D  R F++      
Sbjct: 588 AEEVELKGEKAFSKKTGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAAPPE 647

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSV 393
           K+  ++++GL          G    ++R   ++L++ D +      +T    +D++++  
Sbjct: 648 KELEWNENGL---------AGAYRFLTRVWRLVLENQDHISLEKIDYTAINKADKALIIK 698

Query: 394 CSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            ++ ++++ E+++ +   + ++A  + L+++V  Y                ++    V  
Sbjct: 699 LNQTIKKVTESIEDDYHFNTSIAATMELLNDVQAY-------------QSDSTQYTRVLG 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E ++Q+ I+L  FVP   +++++ + 
Sbjct: 746 EALKQIVIMLSPFVPHFCDELWESIG 771


>gi|296387649|ref|ZP_06877124.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 950

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|116051862|ref|YP_789295.1| valyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587083|gb|ABJ13098.1| valyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 950

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|257462510|ref|ZP_05626922.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060166|ref|ZP_07924651.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685842|gb|EFS22677.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 852

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLHPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G     +   N  N +    +L  SY  D  I +    ++   + ++KK+ +KG 
Sbjct: 89  AAIQNGAHPATWTKSNIENMKRQLKLLGFSYDWDREIASYTPEYYKWNQWIFKKMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +    +    +++V    DG+ +      V   E E +FF+++ Y D+LL 
Sbjct: 149 VYKKKSLVNWCPDCQTVLANEQV---EDGKCWRHSKTTVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 134/383 (34%), Gaps = 79/383 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV + E  G           +L           P+E      +    
Sbjct: 419 WGVSRQRYWGTPIPVLYCETCGEVLEKDENLPVMLPEDIQFSGNGNPLETSESFKNA--- 475

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  +        +   D              Y  +       D +    W P D +
Sbjct: 476 -------TCPCCGGPARRDTDTMDTFVDSSWYFLRYCDSKNQDLPFDKNIIDGWMPVDQY 528

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVF---------------------- 291
           + G +    H +Y   F         LS+N P  + +                       
Sbjct: 529 IGGVEHAVMHLLYARFFHKMLRDLGYLSSNEPFKRLLTQGMVLGPSYYSAEENRFLFAEE 588

Query: 292 ------------SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                       +   +L K EK+SKS  N +DP E+I + G D  R F++      K+ 
Sbjct: 589 VELRGEKAFSKKTGEELLVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAAPPEKEL 648

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSR 396
            ++++GL          G    ++R   ++L++   +      +T   +SD++++   ++
Sbjct: 649 EWNENGL---------AGAYRFLTRVWRLVLENQTHISLEKIDYTTISKSDKALIIKLNQ 699

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ E+++N    + ++A ++ L++E+  Y          K++  +      V  E +
Sbjct: 700 TIKKVTESIENDYHFNTSIAAIMELLNEIQAY----------KSDSTQ---YTRVLGEAL 746

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
           +Q+ I+L  FVP    ++++ + 
Sbjct: 747 KQIVIMLSPFVPHFCEELWESIG 769


>gi|218888174|ref|YP_002437495.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|254782495|sp|B8DJF0|SYL_DESVM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218759128|gb|ACL10027.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 834

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 7/200 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 28  SDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     +   N  N R     L  SYD    + T    ++   +  + +  +KG +
Sbjct: 88  AIKHGTHPAKWTFSNIDNMRTQLRRLGYSYDWRRELATCTPEYYRWEQQFFLRFFEKGLV 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  +      +++V +G          + V+      +F R++ Y ++LL+ 
Sbjct: 148 YRKQAPQNWCPKCHTVLANEQVIEG----LCWRCDSAVEQKNLTQWFLRITDYAEELLAD 203

Query: 180 YESHPEFILPIERRNEVISF 199
                E   P    +   ++
Sbjct: 204 L-DKLEAGWPERVVSMQRNW 222



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 23/235 (9%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKIS 304
           K+W P D ++ G +    H +Y             +  + P    + + G +L +G K+S
Sbjct: 530 KYWMPVDQYIGGVEHAILHLLYSRFFVKALRDCGYMDLDEPFA-NLLTQGMVLKEGAKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E+I   G D +R F +      +D  +   G++          I  L   
Sbjct: 589 KSKGNVVDPTEMIARYGADTVRLFCLFAAPPERDFDWSDSGIEGSYR--FIGRIWRLAEE 646

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSE 423
              ++L           A T   + + +     +++   ++      + A+A V+ LV+ 
Sbjct: 647 LSGVLLPVKACSATAADAATPQGKDLRNKEHATVRKAGADISDRFQFNTAIAAVMELVNA 706

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +           L K           V    +  +  LL    P +A +++  + 
Sbjct: 707 L----------YLAKDELSGDEGGRKVLSSAVATVLTLLSPITPHIAEELWASIG 751


>gi|113869093|ref|YP_727582.1| leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
           [Ralstonia eutropha H16]
 gi|113527869|emb|CAJ94214.1| Leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
           [Ralstonia eutropha H16]
          Length = 1343

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 7/235 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 506 KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 565

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 566 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGIA 625

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y ++LL  
Sbjct: 626 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITEYAEELLGD 681

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                 +   ++   +       G++         + G  I D   Y+     D 
Sbjct: 682 L-DQLGWPERVKVMQQNWIGKSVGVRFAFPHDIPGEDGKPINDGKLYVFTTRADT 735



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 119/369 (32%), Gaps = 48/369 (13%)

Query: 125  SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
            +G    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 949  TGNPLAKDARFLQCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAATMVD-ARND 1005

Query: 185  EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 1006 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 1061

Query: 245  LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG--EK 302
             ++  G K  + PA++ +   +                  P+   + + G  +  G  EK
Sbjct: 1062 REDASGKKHWYNPAEVDLRTDER---------------GRPVGATLIADGQPVVIGGVEK 1106

Query: 303  ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
            +SKS  N IDP  +I++ G D  R F++      +   +   G++    +     + N  
Sbjct: 1107 MSKSKNNGIDPQALIDQYGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWNYG 1164

Query: 363  SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
              + + I           G  T  D  +      VL++   + Q    +  ++  + +++
Sbjct: 1165 YANAAAIRDGAG------GKPTADDADLRREIHGVLKQANYDYQRIQYNTVVSATMKMLN 1218

Query: 423  EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +D                D  +       E    L  +L   VP + + ++D L  A E
Sbjct: 1219 ALD----------------DAKTASPAARRECFGILLRVLYPVVPHVTHGLWDQLGYAAE 1262

Query: 483  NRCFQSLDQ 491
                     
Sbjct: 1263 AGDLLDAPW 1271


>gi|330448740|ref|ZP_08312387.1| valyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492931|dbj|GAA06884.1| valyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 953

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 79/444 (17%), Positives = 146/444 (32%), Gaps = 91/444 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEIKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKPAVEAVENGDIKFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD-------------------------- 223
             N   S+++  ++D  +SR+   WG  I    D                          
Sbjct: 409 YENMYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDNNGNVYVGRTEEEVRANNNLAPVVVL 466

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +      T G+ +N    +    P+D+ V G DI+ F         + 
Sbjct: 467 RQDDDVLDTWFSSALWTFGTQGWPENTADLQTFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 --------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                   A +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVDKRTGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAAKIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            + N  SR V M  +D D           + +D+ I S      +E   ++ N  +  A 
Sbjct: 644 KLWN-ASRYVLMNTEDQDCGFAADSELEYSLADKWIESQFELAAKEFNAHIDNFRLDMAA 702

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  KP  L K +  +        + V+ +   L    +P +   
Sbjct: 703 NTLYEFIWNQFCDWYLELTKP-VLWKGSEAQQRATRRTLITVLEKTLRLAHPVLPYITET 761

Query: 473 IFDIL-----FVADENRCFQSLDQ 491
           I+  +      V  +    Q+L Q
Sbjct: 762 IWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|330826981|ref|YP_004390284.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329312353|gb|AEB86768.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 901

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 6/218 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  RPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +     +   I +   + T +  ++   + L+ K+ ++G  Y+
Sbjct: 92  KNGVPPARWTYENIAYMKQQMQAMGLAIDWSREVATCDPDYYKWNQWLFLKMLERGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G           PV+  E  GY+ +++ Y  +LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVIDGKG----WRTGAPVEKREIPGYYLKITDYAQELLDHVQ 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E        ++V    ++ +   S  R  F   I+
Sbjct: 208 IGNEKATLNGWPDKVRLMQENWIGKSSGVRFAFTHDIE 245



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 116/351 (33%), Gaps = 35/351 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF- 199
           V     G+    + + +    +  ++F                 ++ +P+++    I   
Sbjct: 494 VTCPCCGKSARRETDTMDTFVDSSWYFMRYCDARNGEKMVAEGADYWMPMDQYIGGIEHA 553

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           +   L     ++   D G+   D+P   +      L              G+K  FWP D
Sbjct: 554 ILHLLYARFWTKVMRDLGLVKVDEPFTRLLTQGMVL----NHIYSRRTAKGAKDYFWPHD 609

Query: 260 L-HVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEV 316
           + HV+G D  +    +  PA      LP      +   I ++G   +SKS  N +DP  +
Sbjct: 610 VEHVLGDDGKIVGARLKNPAESGDGLLP------AGTPIDYEGVGTMSKSKNNGVDPQHL 663

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---- 372
           IE+ G D  R + +          ++   ++          + N   + +S I K+    
Sbjct: 664 IEKYGADTARLYTMFTAPPELTLEWNDAAVEGSYR--FLRRVWNFGVK-LSAIDKEAALK 720

Query: 373 --YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                       F +   ++      VL+++  + Q    +  ++  + +++        
Sbjct: 721 SVAGATSLKDVEFGKEARALRLEIHTVLKQVDYDYQRMQYNTVVSGAMKMINA------- 773

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                L+       +      +E    L  +L    P + + ++  L  A 
Sbjct: 774 -----LEDFKAMDGAGAQVALIEGFGILLRVLYPATPHITHVLWQGLGYAG 819


>gi|12585560|sp|O26861|SYV_METTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 877

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 63/336 (18%), Positives = 114/336 (33%), Gaps = 22/336 (6%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSGLKDLSLS 210
           +   V    +        +         +      +P+   +E   +      +  +  +
Sbjct: 375 EMKWVPGHMKTRLLNWTGSMDWDWCISRQRIFATPIPVWYCSECGRVHVADEEMLPVDPT 434

Query: 211 RK----TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           R     T + G       + ++  W+D+  + L+  G+ D         +PADL   G D
Sbjct: 435 RDGPGITCECGSTEFIGEEDVLDTWMDSSISPLSVAGWPDESYREL---FPADLRPQGHD 491

Query: 267 ILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+R  A Y       L+   P  + V +       G K+SKS GNVI P EV+E+ G DA
Sbjct: 492 IIRTWAFYTILRCMALTGEKPFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADA 551

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR +       G D  +    +K            N        + ++            
Sbjct: 552 LRLW-AAGSVPGSDVPFAWKDVK--YGYKFLRKFWNAFRFISIHLTEN------PEVEAR 602

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D  ILS    ++ E+ E++ +     A+ +V + +     D Y +A K       +P+
Sbjct: 603 PMDRWILSRLMNLVAEVTESLDDYNFAAAVNRVQTFIWHDFCDEYIEAVKYRLYSDEDPE 662

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                      V+     LL    P    ++   + 
Sbjct: 663 SRMAAQNTLRMVLDTCLRLLAPVAPHFTEEVHQHVG 698



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 63/175 (36%), Gaps = 15/175 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  I T   YP    H+GH    +  D++ARF R+ G DVLF  G D HG       
Sbjct: 35  TKPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMRGFDVLFPQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                 +N R  ++    L  S D      T    +    +
Sbjct: 95  EETHNIKKSDVSREEFRRLCVELTQENIRMMKEQMQRLGFSQDWNHEFVTMTPEYMRRTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           + + ++   G IY+G +   +  R E      EV    +    N    PV+  +E
Sbjct: 155 LSFLRMYRDGLIYQGVHPVNWCPRCETAIAFAEVEYIENETNLNYVRFPVEGADE 209


>gi|254283842|ref|ZP_04958810.1| valyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680045|gb|EED36394.1| valyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 921

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 140/423 (33%), Gaps = 94/423 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++          ++  ES     +P +  N   ++++  ++D  +SR+   W
Sbjct: 348 IEPYLTPQWYVDAKKMAGPAIAAVESGDIEFVPKQWENTYFAWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 406 GHRIPAWYDDAGNVYVGEDEPAVREQYSLSPTVGLHQDEDVLDTWFSSALWTFSTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 ++F P  + V G DI+ F    +   +       P              G+K+S
Sbjct: 466 QHA-ELSRFHPTSVLVTGFDIIFFWVARMIMMSLHFLGEAPFKAVYVHGLVRDGDGQKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNVIDPI++I+                                       G DALR+
Sbjct: 525 KSKGNVIDPIDLIDGISLDDLIAKRTSSMMQPQLARKIEKQTRRHFPDGITGYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFT 384
                 + G+D  +D   ++   N        N +  +   +L + +G    P      T
Sbjct: 585 TFYSLASTGRDIRFDIGRMEGFRN------FCNKLWNAARYVLMNCEGHRSDPNVAIELT 638

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTN 440
            +D  ILS   +   E    +    + RA   +   +     D Y +  KP  W+   ++
Sbjct: 639 LADRWILSRLQQTTTEFDRAITQYRLDRASQVLYDFIWNEYCDWYLELSKPVLWD-DNSD 697

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSL----DQR 492
           P   +      V+V+  +  LL   +P +  +I+  +     +  E    Q      D +
Sbjct: 698 PAILAGTRQTLVQVLETILRLLHPLMPFITEEIWQSVAPLAGIDGETVMLQPWPAVNDAQ 757

Query: 493 LKP 495
           ++P
Sbjct: 758 IEP 760



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 24/172 (13%)

Query: 8   YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y S AI  PN     H+GH ++  I D L R+HR+ G D L+  GTD  G       +  
Sbjct: 32  YFSIAIPPPNVTGSLHMGHGFQQAIMDALVRYHRMRGQDTLWQVGTDHAGIATQMVVERQ 91

Query: 66  GVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                             KV+  +       +R  R +    D S + F  T +      
Sbjct: 92  LQDQGTSRVALGRDAFVEKVWEWKAESGGNITRQLRRLGASTDWSRERF--TMDPGLSRA 149

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            + ++  + ++G IY+G     +  +     +D EV +  +  +      P+
Sbjct: 150 VQKVFIDLYEEGLIYRGQRLVNWDPKFHTAISDLEVVQEEEKGFLWHFRYPL 201


>gi|262045298|ref|ZP_06018323.1| valine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037354|gb|EEW38600.1| valine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 951

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  I++  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWIIAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ENQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|160894424|ref|ZP_02075200.1| hypothetical protein CLOL250_01976 [Clostridium sp. L2-50]
 gi|156863735|gb|EDO57166.1| hypothetical protein CLOL250_01976 [Clostridium sp. L2-50]
          Length = 1056

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/453 (14%), Positives = 142/453 (31%), Gaps = 32/453 (7%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQN----AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
              D+ F    D  G    +             KV VD          D   + +D    
Sbjct: 349 RKYDLPFVQFVDGKGDLTEETPYAGIFVKDADPKVLVD---------LDKEGLLFD---- 395

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD----GQYYN 151
               +        W+  +      +  +    + +RD+   N+D V    +    G++ +
Sbjct: 396 --APKFEHEYPHCWRCDTPLIYYARDTWFIKMTAVRDKLVKNNDTVNWIPESIGKGRFGD 453

Query: 152 AQHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
              N   W      ++      ++ +    +       L     N             ++
Sbjct: 454 WLKNVQDWGLSRNRYWGTPLNIWECECGCRHAIGSIEELKSMSDNCPDEIELHRPFIDAV 513

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
           + K  + G K       ++  W D+ +       Y         K +PAD      D   
Sbjct: 514 TIKCPECG-KQMHRVSEVIDCWFDSGSMPFAQWHYPFENADIFEKHFPADFISEAVDQTR 572

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + LL    P    +         G+K+SKS GN +DP++ + + G DA+R+
Sbjct: 573 GWFYSLMAISTLLFDKAPFKNVIVLGHVQDKDGQKMSKSKGNAVDPMDALNKYGADAIRW 632

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +     A      + +D + +     L           +   + +++ +         + 
Sbjct: 633 YFYSNSAPWLPNRFHEDAVIECQRKFLGTLWNTYAFYVLYANIDNFNPLEHELDYEKLSL 692

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRA 444
            D+ +LS  +  ++ + EN+    I      +   V ++ + Y    +     K      
Sbjct: 693 MDKWLLSKLNSTVKAVDENLAAYKIPETTRVLEEFVDDLSNWYVRRGRERYWAKGMEQDK 752

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                     +  +++     +P +A  I+  L
Sbjct: 753 VNAYMTLYTALVTISMTAAPMIPFMAEDIYQNL 785



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGH    +I D++ R+  + G +V+   G D HG  +   
Sbjct: 36  KDLPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHNVVRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + + +  +      DD   T     
Sbjct: 96  VEKLLGIDGKEQIEEYGLEPFIQKCKESVWKYKGMWEEFSGKVGFWADMDDPYVTYHNDF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     KKI D+G +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKKIWDQGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|78357482|ref|YP_388931.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123754859|sp|Q30YL0|SYL_DESDG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78219887|gb|ABB39236.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 829

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 6/181 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I DV+ARF R+ G +VL   G D  G     A
Sbjct: 28  SDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARFKRMQGFNVLHPMGWDAFGLPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  N R     L  SYD    + T +  ++   ++ + K  +KG I
Sbjct: 88  AIKHDTHPAKWTYSNIDNMRSQLKRLGYSYDWRRELATCDAEYYRWEQLFFLKFMEKGLI 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  +      +++V  G          + V+  +   +F R+++Y ++LL+ 
Sbjct: 148 YRKKAPQNWCPKCNTVLANEQVIDG----LCWRCDSVVEQRDLAQWFLRITSYAEELLAD 203

Query: 180 Y 180
            
Sbjct: 204 L 204



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 96/250 (38%), Gaps = 25/250 (10%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKIS 304
           K+W P D ++ G +    H +Y             +  + P    + + G +L  G K+S
Sbjct: 525 KYWLPVDQYIGGVEHAILHLLYARFFIKALRDCGYMDLDEPFA-NLLTQGMVLMDGAKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E+I   G D +R F +      +D  +   G++    +   N +  LV  
Sbjct: 584 KSKGNVVDPTEMISRYGADTVRLFCLFAAPPERDFDWSDSGIEGA--SRFVNRVWRLVED 641

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSE 423
             + +         +      + + I       +++   ++QN    + A++ V+ LV+ 
Sbjct: 642 LPAGMAPMAPCSSSSDDCTGAAAKDIRQKEHATVKKAGADIQNRFQFNTAISAVMELVNA 701

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-- 481
           +  Y    +   L      R      V    +  +  +L    P L  ++++ L   D  
Sbjct: 702 L--YLTRDE---LGADEKGR-----RVLGSAVSSVLAMLAPITPHLCEELWEQLGHKDML 751

Query: 482 ENRCFQSLDQ 491
             R +   D+
Sbjct: 752 TARPWPRYDE 761


>gi|217969623|ref|YP_002354857.1| leucyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506950|gb|ACK53961.1| leucyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 875

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y  +   YP+ + H+GH     I DVLARFHR+ G +VL   G D  G     AA
Sbjct: 31  SRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMKGYNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +   + T    ++   + L+ ++ +KG IY
Sbjct: 91  IQNNVPPAKWTYANIDYMKAQLKRLGFAIDWSRELATCTPEYYRWEQWLFTRLYEKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V  G            V+  E   Y+ +++AY D+LLS  
Sbjct: 151 KRLGTVNWDPVDETVLANEQVIDG----RGWRSGALVEKREIPMYYMKITAYADELLSAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   ++   +       G
Sbjct: 207 DDLPDWPEQVKLMQKNWIGRSEG 229



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 113/354 (31%), Gaps = 35/354 (9%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E      G+    + + +    E  ++F   A  D   +  ++  ++  P+++    I  
Sbjct: 480 ECSCPKCGKPAKRETDTMDTFVESSWYFLRYACADSSTAMVDARVDYWAPVDQYIGGIEH 539

Query: 200 -VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTGYLDNPDGSKAKF 255
            +   L     +R   D G+    +P         AL         T Y +   G K   
Sbjct: 540 AILHLLYSRFFTRAMRDCGLVKVSEP-------FSALLTQGMVVAETYYRELDGGKKQWI 592

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            PAD+ V   +          A L S  LP    V   G      EK+SKS  N +DP  
Sbjct: 593 NPADVVVERDE----RGRIVAAKLESDGLP----VVIGGT-----EKMSKSKNNGVDPQS 639

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++++ G D  R F++      +   +   G++    +     + N      +        
Sbjct: 640 LVDQYGADTARLFMMFAAPPDQQLEWSDSGVEGA--SRFLRRVWNYGHTFATATRAALPA 697

Query: 376 MIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                 G    +   +       L++   +      +  ++  + +++ +      +   
Sbjct: 698 TRALAAGTLPVAAADVRREVHTHLKQASYDFGKHQFNTVVSAAMKILNAL-----EKAHK 752

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +L  T P   + V     E    L  LL    P + + ++       +    Q 
Sbjct: 753 DLAGTEPAAHAEV---AEEGFSILLRLLSPITPHICHALWQDCGFGTDILAAQW 803


>gi|210623773|ref|ZP_03294033.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
 gi|210153355|gb|EEA84361.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
          Length = 807

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   Y      YP+ + H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  TEKPNYYTLEMFPYPSGKLHMGHVRNYSIGDVIARFKKMKGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N    R+  ++L +SY  D  + T+   ++   + ++ K+ ++G  
Sbjct: 90  AIKHGIHPHKWTMENIAEMREQLNLLGLSYDWDREVATSTPEYYKFTQEIFLKLLERGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V +G            V   + E ++F+ +A+ ++LL+ 
Sbjct: 150 YKKKSYVNWCPSCETVLANEQVVQGE----CERCGTTVIKKDLEQWYFKTTAFAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 206 LDKLDGWPEKVKTMQRNWIGKSTG 229



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 130/390 (33%), Gaps = 39/390 (10%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++         +  +  K    K         + +   N          Q Y     PV 
Sbjct: 364 DEDGIMINSEEFNGMPAKEAFEKIVDKMEEEGKGKRTVNYRLRDWLVSRQRYWGCPIPVV 423

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + ++ G           LL                +   +            R+      
Sbjct: 424 YCDDCGIVPEKKENLPVLLPTDVEFTGKGESPLTTSPTFTETVCPKCGKPARRE------ 477

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
               D              Y       +      A  W P D ++ G +    H +Y   
Sbjct: 478 ---VDTMDTFIDSSWYFLRYTDNKNTEEPFRKDIADKWVPVDQYIGGVEHAIMHLLYARW 534

Query: 278 --------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                    ++ A+ P  K + + G +L +G K+SKS GN + P+++I+E G D  R F+
Sbjct: 535 LMKAFHSMGMVEADEPF-KNLLTQGMVLKEGSKMSKSKGNTVSPLKIIDEYGADTARLFI 593

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  +   G++            N V R V  + ++        G  T +D+ 
Sbjct: 594 LFAAPPERDLDWSDQGVEG------CFKFLNRVYRLVDELAEEVKNCDDEFGKLTSADKD 647

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +    + V++++  ++ +    + ++A ++ L++E+ +Y          K    R S V+
Sbjct: 648 MRFTINSVIKKVTSDLDEKFGFNTSIASLMELINEMYKY----------KELDGRNSAVI 697

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               E +  +  ++  F P L  +++ ++ 
Sbjct: 698 K---EGVEAIVTIIAPFTPHLGEELWQMIG 724


>gi|189083222|sp|Q0T6Q2|SYL_SHIF8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKHHTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E ++ +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALQAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|61657325|emb|CAI44244.1| leucyl-tRNA synthetase [Thermotoga neapolitana]
          Length = 876

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 81  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 140

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 141 AIEKGIHPEEWTRKNISIIRKQVKRLGISYDWNREIATCDEEYYKWTQWIFLQLYKNGLA 200

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 201 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIKHLEQWFFKITDYAERLLND 256

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++          +G
Sbjct: 257 LEKLTGWPEHVKTMQRNWIGKSTG 280



 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 115/342 (33%), Gaps = 37/342 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 479 QRYWGAPIPIIYCEKCGTVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKKTKCPICGG 538

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 539 EAQRET---------DTMDTFVDSSWYFLRYVNPHLDDKPFEPDDVNYWLPVDQYIGGVE 589

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P ++IE
Sbjct: 590 HAILHLLYSRFITKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDDMIE 648

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++              +  +   IL        
Sbjct: 649 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR------FIRRLWNTFYTILPHVKEETV 702

Query: 379 TPGAF-TESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              +  T  ++ +      ++++I E+++     + A++ ++ L++ +++Y         
Sbjct: 703 EGLSLTTPVEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELINHLNQYL-------- 754

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +          +  E+   L ++L  F P LA + +  L 
Sbjct: 755 --SGVPEDQWNRKLLREIAENLTLVLSPFAPHLAEEFWHELG 794


>gi|319764765|ref|YP_004128702.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317119326|gb|ADV01815.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 901

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 6/218 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA 
Sbjct: 32  RPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGYNVLMPMGWDAFGLPAENAAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +     +   I +   + T +  ++   + L+ K+ ++G  Y+
Sbjct: 92  KNGVPPARWTYENIAYMKQQMQAMGLAIDWSREVATCDPDYYKWNQWLFLKMLERGIAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G           PV+  E  GY+ +++ Y  +LL + +
Sbjct: 152 KTQVVNWDPVDQTVLANEQVIDGKG----WRTGAPVEKREIPGYYLKITDYAQELLDHVQ 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E        ++V    ++ +   S  R  F   I+
Sbjct: 208 IGNEKATLNGWPDKVRLMQENWIGKSSGVRFAFTHDIE 245



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 116/351 (33%), Gaps = 35/351 (9%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF- 199
           V     G+    + + +    +  ++F                 ++ +P+++    I   
Sbjct: 494 VTCPCCGKSARRETDTMDTFVDSSWYFMRYCDARNGEKMVAEGADYWMPMDQYIGGIEHA 553

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           +   L     ++   D G+   D+P   +      L              G+K  FWP D
Sbjct: 554 ILHLLYARFWTKVMRDLGLVKVDEPFTRLLTQGMVL----NHIYSRRTAKGAKDYFWPHD 609

Query: 260 L-HVIGKDI-LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEV 316
           + HV+G D  +    +  PA      LP      +   I ++G   +SKS  N +DP  +
Sbjct: 610 VEHVLGDDGKIVGARLKNPAESGDGLLP------AGTPIDYEGVGTMSKSKNNGVDPQHL 663

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---- 372
           IE+ G D  R + +          ++   ++          + N   + +S I K+    
Sbjct: 664 IEKYGADTARLYTMFTAPPELTLEWNDAAVEGSYR--FLRRVWNFGVK-LSAIDKEAALK 720

Query: 373 --YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                       F +   ++      VL+++  + Q    +  ++  + +++        
Sbjct: 721 SVAGATSLKDVEFGKEARALRLEIHTVLKQVDYDYQRMQYNTVVSGAMKMINA------- 773

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                L+       +      +E    L  +L    P + + ++  L  A 
Sbjct: 774 -----LEDFKAMDGAGAQVALIEGFGILLRVLYPATPHITHVLWQGLGYAG 819


>gi|255554032|ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223542652|gb|EEF44189.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 678

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 6/240 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  + I++A+ Y N  PH+G+    ++ ADV AR+ RL G + ++  GTDE+G      
Sbjct: 23  GKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETK 82

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A     + K   D+     R++    +IS+D+F RT+  +  + C+ ++KK+ +   + +
Sbjct: 83  AMEENCSPKEICDKYHAIHREVYKWFNISFDEFGRTSTPQQTEVCQAIFKKLLENNWLSE 142

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 Y    + +  D  V      +  N         E  G     +  +D       
Sbjct: 143 NTMQQLYCDTCKRFLADRLVEGTCPTEGCNYDSARGDQCENCGKLLNPTELKDPRCKVMF 202

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----DDPQYIMYVWIDALTN 237
                             V   L      + +   GI +      D    + VW   L  
Sbjct: 203 PSTLLGTEENWTLMKTISVTEYLNY-EAGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLT 261



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 16/240 (6%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVREIACGKDGFY 341
           N  L K +    ++ ++  K SKS G  +   +  +  + V+  RY+L+       D  +
Sbjct: 212 NWTLMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLF 271

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPT--PGAFTESDESILSVCS 395
               L+ ++N +L N +GN ++R +S I K     Y  ++P           + +     
Sbjct: 272 TWSDLQAKLNNELLNNLGNFINRVLSFIAKPPGTGYGSIVPDAPNADSHPRTKKLAEDVG 331

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++L +  E M+   + + L   +S+ SE + Y    + W+L K +    + V+  +V ++
Sbjct: 332 KLLGQYVEAMEKVKLKQGLKTAMSISSEGNAYLQECQFWKLYKEDQPSCNIVMRASVGLV 391

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCF--------QSLDQRLKPGFMLHKTFDPIF 507
             LA LL+ F+P  + ++F  L ++ E            ++  + +     +  T +P+F
Sbjct: 392 YLLACLLEPFMPSFSLEVFKQLNLSPEEASLCDEKGDIDRAPWEFIPHNHKIG-TPEPLF 450


>gi|218889882|ref|YP_002438746.1| valyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|313109253|ref|ZP_07795221.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|218770105|emb|CAW25867.1| valyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|310881723|gb|EFQ40317.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 950

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|15599029|ref|NP_252523.1| valyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|81540188|sp|Q9HXH0|SYV_PSEAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|9950009|gb|AAG07221.1|AE004800_10 valyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 950

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEAELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|253990630|ref|YP_003041986.1| leucyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782080|emb|CAQ85244.1| leucyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 860

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +           +D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIEYMKGQLKTLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            V+  E   +F +++AY ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVVDG----CCWRCDTKVERKEIPQWFIKITAYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++  E+   ++           G+
Sbjct: 207 DTLEEWPEQVKTMQRNWIGRSEGI 230



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 114/338 (33%), Gaps = 41/338 (12%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WG 217
           +ME   Y+ R +           +   + LP+++    I      L       K     G
Sbjct: 493 FMESSWYYARYTCPDYDKGLLDPAAANYWLPVDQYIGGIEHAIMHLMYFRFFHKLMRDAG 552

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
           +   ++P   +      L        Y    +G K    PAD HV   D           
Sbjct: 553 MVNSNEPAKRLLCQGMVL----ADAFYYIGKNGEKIWVSPADTHVERDD---------KG 599

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++ A      ++   G       K+SKS  N IDP  ++E+ G D +R F++       
Sbjct: 600 RIIKATDKEGHELVYTGM-----SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPEL 654

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + +  ++       AN     V R V               + +   + +     + 
Sbjct: 655 TLEWQESSVEG------ANRFLKRVWRLVYEHSSKGTTQPLDITSLSVEQKDLFRDLHKT 708

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++ +++  +   + A+A ++ L++++ R            T+ DRA     +  E + 
Sbjct: 709 IAKVTDDVGRRQAFNTAIAAIMELMNKLTRASQE--------TDQDRA-----LMQEALL 755

Query: 457 QLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQR 492
            +  +L   +P     ++  L    +     +   D++
Sbjct: 756 AVVRMLSPIIPHACFIMWQALGGKGDIDIADWPQADEQ 793


>gi|331703258|ref|YP_004399945.1| Valine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801813|emb|CBW53966.1| Valine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 872

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 35/347 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+   W
Sbjct: 353 VEPYLSDQWFVKMDKFKNMVIDLQNSDNKINFYPNRFSDVLNRWMTDAHDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           Q ++  W  +     +T       +    
Sbjct: 412 GHQIPCWYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYF 471

Query: 254 KFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           K + P  + V G DI+ F    + +     +  +P    +           K+SKSLGN 
Sbjct: 472 KNYFPTSVLVTGYDIIFFWVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI   G D+LR FL+     G+D  Y  + +    N    N + N        + 
Sbjct: 532 IDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKILASWN--FINKLWNASRYVFLNLD 589

Query: 371 KDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           KD+             +++ IL+  S+    + E M       A   +   V       Y
Sbjct: 590 KDFKFDPNFYKTDLEITNQWILTELSKTQAYVYEKMNKYEFSLAGNHLWDFVWNKYCSWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   +   N             V++++ I+L   +P ++ +I+
Sbjct: 650 IEFSK---VNLNNDKFNHQTKQTLFYVLKEILIMLHPLIPFVSEEIY 693



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I         + HIGHA++  + D + RF +L G D LF  G D  G      
Sbjct: 34  SNKPKFSIILPPPNVTGKLHIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSGISTQVK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R     L +S D      T ++  +
Sbjct: 94  VEAKLKQQGIDKNKLGREKFLLEAWKWKEEYANIIRKQWAKLGLSLDYSTEKFTLDEDIN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ K  +   IYK      +    +   ++ EV  
Sbjct: 154 QIVKEIFVKFYNDQIIYKDKQIVNWDPEQKTAISNVEVIY 193


>gi|268590406|ref|ZP_06124627.1| leucine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314320|gb|EFE54773.1| leucine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 860

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     + DV++R+ RL G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTMGDVISRYQRLLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++   +L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKNQLKMLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVVDG----CCWRCDTPVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DKLDDWPEQVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 20/179 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + +  ++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFVR 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVIS 419
            V R V    +            T   + +     + + ++ ++       + A+A ++ 
Sbjct: 672 RVWRLVHEHSQKGATSPLDISTLTPEQKDLRRDLHKTIAKVSDDFSRRYAFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++++      + P   ++T  DRA     +  E +  + ++L   +P    +++  L 
Sbjct: 732 FMNKL-----VRAP---QETEQDRA-----LVQESLEAITLMLSPIIPHACFEMWKALG 777


>gi|110833353|ref|YP_692212.1| valyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|122959655|sp|Q0VSA8|SYV_ALCBS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|110646464|emb|CAL15940.1| valyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 931

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 137/396 (34%), Gaps = 81/396 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +       ++  E+     +P    N   S+++  L+D  +SR+   W
Sbjct: 350 IEPYLTDQWFVAVEELAKPAIAAVENGDIQFVPKNYENMYFSWMRD-LQDWCISRQ-LWW 407

Query: 217 G--IKIPDD---------------------------PQYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T G+ D+
Sbjct: 408 GHRIPAWYDADGNVYVGRDEEEVRAENNLGDTPLSQDDDVLDTWFSSALWTFSTLGWPDD 467

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            D  +    P D+ V G DI+ F    +       +  +P  K         + G+K+SK
Sbjct: 468 TDALRTFH-PTDVLVTGFDIIFFWVARMIMMTLKFTDQVPFKKVYVHGLVRDNDGQKMSK 526

Query: 306 SLGNVIDPIEVI-------------------------------------EEVGVDALRYF 328
           S GNV+DP+++I                                        G DALR+ 
Sbjct: 527 SKGNVLDPLDMIDGITLDALIDKRTKGLMQPQKEKQITKRTNKDFPDGINPYGTDALRFT 586

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTES 386
            +   + G+D  +D   ++     +  N I N  +R V M  +  D  I T      + +
Sbjct: 587 FLSLASTGRDIKWDMGRIEG--YRNFCNKIWN-AARYVMMNTEGEDCGIDTDSEVELSLA 643

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WELKKTNPD 442
           D  I+S   R   E+ E + +     A       +     D Y +  KP  W  + ++  
Sbjct: 644 DRWIISALQRAELEVSEALDSFRFDVASHAAYEFIWNEYCDWYLELSKPVLWGDEYSDAQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  T     V V+  +  +   F+P +  +I+  + 
Sbjct: 704 KRGT-RRTLVTVLEAILRMAHPFMPFITEEIWQKVG 738



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA++  I D L R+ R+ G + L+  GTD  G       + 
Sbjct: 33  DPFCIMIPPPNVTGSLHMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTDHAGIATQMVVER 92

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  ++          +  S D      T +    +  
Sbjct: 93  KLAGEGTNRHELGREKFLDKVWEWKRESGGTITRQLRRMGASVDWTRERFTMDDGLSNAV 152

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           R ++ ++  +G IY+G     +        +D EV    +  +      P+
Sbjct: 153 REVFVRLHKEGLIYRGKRLVNWDPALHTAISDLEVENVEEQGHMWHFRYPL 203


>gi|325663281|ref|ZP_08151731.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086843|ref|ZP_08335920.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470735|gb|EGC73965.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330410009|gb|EGG89444.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 1035

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 70/505 (13%), Positives = 156/505 (30%), Gaps = 38/505 (7%)

Query: 3   EREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
            +   Y++ A  Y          HI  A+    A V  R+      D+ F    DE G+ 
Sbjct: 294 NKRAYYVTCA-DYVTLTDGTGVVHIAPAFGEDDAQVGRRY------DLPFLQLVDEKGEM 346

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
             +           F  +      +  +   + +             +    W+  +   
Sbjct: 347 TEETPWAGT-----FCKKADPMVLEDLEKRGLLF------AAPNFEHSYPHCWRCDTPLI 395

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEEEGYFFRLS-- 170
              +  +    +   E    ++            G++ +   N   W      ++     
Sbjct: 396 YYARESWFIKMTEVKEDLIRNNNTINWIPESIGKGRFGDWLENVQDWGISRNRYWGTPLN 455

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            ++ +    +       L     N             +++ K    G ++   P+ ++  
Sbjct: 456 VWECECGHMHSIGSIEELKSMSDNCPDDIELHRPFIDAVTIKCPHCGKEMHRVPE-VIDC 514

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           W D+         Y         + +PAD      D     F+++   + L+    P   
Sbjct: 515 WFDSGAMPFAQHHYPFENKDLFEQQFPADFISEAVDQTRGWFYSLLAISTLVFNKAPYKN 574

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        KG+K+SKS GN +DP E +E+ G DA+R++     A      +    +  
Sbjct: 575 VIVLGHVQDEKGQKMSKSKGNAVDPFEALEQYGADAIRWYFYINSAPWLPNRF-HGKIVT 633

Query: 349 RVNADLANGIGNLVSRSVSMI-LKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENM 405
                    + N  +  V    +  +D              D+ +LS  + +++ +  N+
Sbjct: 634 EGQRKFMGTLWNTYAFFVLYAEIDQFDATKYQLEYEKLPVMDKWLLSKLNTLIKTVDTNL 693

Query: 406 QNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +N  I  +   +   V ++ + Y    +     K  P             +  +A +   
Sbjct: 694 ENYRIPESARALQEFVDDMSNWYVRRSRERFWAKGMPQDKINAYMTLYTALVTVAKVAAP 753

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
            +P +   I+  L  + +    +S+
Sbjct: 754 MIPFMTEDIYQNLVRSIDKEAPESI 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T +   
Sbjct: 96  VEKLLGLDGKEQIEEYGLEPFIKHCKDSVWKYKGMWEDFSATVGFWADMDNPYVTYDNNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKQIWEKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|15678792|ref|NP_275909.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621857|gb|AAB85270.1| valyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 897

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/336 (18%), Positives = 114/336 (33%), Gaps = 22/336 (6%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFVKSGLKDLSLS 210
           +   V    +        +         +      +P+   +E   +      +  +  +
Sbjct: 395 EMKWVPGHMKTRLLNWTGSMDWDWCISRQRIFATPIPVWYCSECGRVHVADEEMLPVDPT 454

Query: 211 RK----TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           R     T + G       + ++  W+D+  + L+  G+ D         +PADL   G D
Sbjct: 455 RDGPGITCECGSTEFIGEEDVLDTWMDSSISPLSVAGWPDESYREL---FPADLRPQGHD 511

Query: 267 ILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           I+R  A Y       L+   P  + V +       G K+SKS GNVI P EV+E+ G DA
Sbjct: 512 IIRTWAFYTILRCMALTGEKPFSEIVINGMVFGEDGHKMSKSRGNVIAPEEVLEDYGADA 571

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR +       G D  +    +K            N        + ++            
Sbjct: 572 LRLW-AAGSVPGSDVPFAWKDVK--YGYKFLRKFWNAFRFISIHLTEN------PEVEAR 622

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
             D  ILS    ++ E+ E++ +     A+ +V + +     D Y +A K       +P+
Sbjct: 623 PMDRWILSRLMNLVAEVTESLDDYNFAAAVNRVQTFIWHDFCDEYIEAVKYRLYSDEDPE 682

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                      V+     LL    P    ++   + 
Sbjct: 683 SRMAAQNTLRMVLDTCLRLLAPVAPHFTEEVHQHVG 718



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 63/175 (36%), Gaps = 15/175 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  I T   YP    H+GH    +  D++ARF R+ G DVLF  G D HG       
Sbjct: 55  TKPRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFKRMRGFDVLFPQGWDCHGLPTEVKV 114

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                 +N R  ++    L  S D      T    +    +
Sbjct: 115 EETHNIKKSDVSREEFRRLCVELTQENIRMMKEQMQRLGFSQDWNHEFVTMTPEYMRRTQ 174

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           + + ++   G IY+G +   +  R E      EV    +    N    PV+  +E
Sbjct: 175 LSFLRMYRDGLIYQGVHPVNWCPRCETAIAFAEVEYIENETNLNYVRFPVEGADE 229


>gi|325860132|ref|ZP_08173258.1| valine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482417|gb|EGC85424.1| valine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 897

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 133/384 (34%), Gaps = 59/384 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F R+  + D  LS          P + +N         +KD  +SR+   
Sbjct: 368 PIEPKLSTQWFLRMQHFADIALSPVMDDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 425

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     M  W  +   
Sbjct: 426 WGHRIPAYYFKDAEGKNATVVAETTEEALKMAQEINPSVTAADLEQESDCMDTWFSSWLW 485

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    +++PD  + + ++P    V G DI+ F    +    +      P     F+  
Sbjct: 486 PISVFDGINHPDNEEISYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKFPFKHVYFTGI 545

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 546 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 602

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++          P A   + E   +    V  E+ E  ++  I  AL
Sbjct: 603 ---FNNKIWNAFRLVQGWQTADTEQPQASRIAVEWFDAKLKAVNAEMDEQFRSYRISEAL 659

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P+    +  VT E        L  +L  F+P + 
Sbjct: 660 MTVYRL------FWDEFSSWYLEMIKPEYGKPIDTVTYEATLRFFNALLKMLHPFMPFIT 713

Query: 471 NKIFDILFVADENRCFQSLDQRLK 494
            +++  L+   +       + RL 
Sbjct: 714 EELWQHLYDRKDGESIMRDELRLP 737



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T ++    
Sbjct: 92  VNKLAQEGIKKTDLTREQFLEHAWDWTREHGGIILKQLRRLGCSCDWDRTAFTMDETRSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYNKGYIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|164686335|ref|ZP_02210365.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
 gi|164601937|gb|EDQ95402.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
          Length = 1037

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 103/257 (40%), Gaps = 6/257 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+         Y         + +PAD    G D     F+++   +  +    
Sbjct: 517 VIDCWFDSGAMPFAQHHYPFENKEKFERLFPADYICEGIDQTRGWFYSLLAISTFVMGKA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G+K+SKS GN +DP E+ ++ G DALR++L+          +D+ 
Sbjct: 577 PYKNVLVNDLVLDKNGKKMSKSKGNTVDPFELFDKYGADALRWYLLYVSPPWTPIRFDEA 636

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIR 402
           GL++  +  L          ++     D D            E D  ILS  + +++   
Sbjct: 637 GLREIQSKFLGTMKNVYNFFTLYANTDDIDPKDFFVEYKDRPELDRWILSKYNSLVKSTV 696

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           EN++   ++R +  + + +++   + Y    +         +    V   T E++  L  
Sbjct: 697 ENLEIFEVNRVIRNIQAFLNDDLSNWYIRRSRRRFWATELTEDKKAVYNTTYELLTGLCR 756

Query: 461 LLQAFVPKLANKIFDIL 477
           L+  F P ++ +++  L
Sbjct: 757 LIAPFAPYMSEEMYRDL 773



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 37  ENDPSYVFYEGPPTANGNPGIHHVVARTLKDWVCRYKTMSGYQVQRKAGWDTHGLPVELQ 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRH 102
            +                       +  V      +R+M +    ++  D+   T +  +
Sbjct: 97  VEKELGLTNKQQIEEYGIKEFNQKCRESVFSYEAKWRNMTERMAYEVDLDNPYITLDNNY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   +  K + +G +Y+G     Y  R        EV +G      N      +  + 
Sbjct: 157 IESVWWILDKFNKEGYLYEGHKIVPYCPRCGTGLASHEVAQGYKEVKTNTVICKFKKKDA 216

Query: 163 EGYFF 167
           E  +F
Sbjct: 217 ENEYF 221


>gi|163814945|ref|ZP_02206332.1| hypothetical protein COPEUT_01095 [Coprococcus eutactus ATCC 27759]
 gi|158449628|gb|EDP26623.1| hypothetical protein COPEUT_01095 [Coprococcus eutactus ATCC 27759]
 gi|295094358|emb|CBK83449.1| isoleucyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 1056

 Score =  156 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/448 (13%), Positives = 129/448 (28%), Gaps = 22/448 (4%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    D  G    +           FV           D   + +D        
Sbjct: 349 RNYDLPFVQFVDGKGDLTEETPFAGM-----FVKDADPEVLKDLDARGLLFD------AP 397

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD---GQYYNAQHNP 156
           +        W+  +      +  +    + +RD+   N+D V    +      +      
Sbjct: 398 KFEHEYPHCWRCDTPLIYYARDTWFIKMTAVRDKLVKNNDTVNWIPESIGKGRFGDWLKN 457

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           VQ        +  +            H        R           L    +   T   
Sbjct: 458 VQDWGLSRNRYWGTPLNIWECECGCRHAIGSKEELRSMSDNCPEDIELHRPFIDAVTIKC 517

Query: 217 GI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
               K       ++  W D+ +       Y         K +PAD      D     F++
Sbjct: 518 PECGKQMHRVTEVIDCWFDSGSMPFAQWHYPFENQDIFEKHFPADFISEAVDQTRGWFYS 577

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + LL    P    +         G+K+SKS GN +DP++ + + G DA+R++    
Sbjct: 578 LMAISTLLFDKAPFKNVIVLGHVQDKDGQKMSKSKGNAVDPMDALNKYGADAIRWYFYSN 637

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESI 390
            A      + +D + +     +           +   + +++ +         +  D+ +
Sbjct: 638 SAPWLPNRFHEDAVVECQRKFMGTLWNTYAFYVLYANIDNFNPLEHELEYDKLSLMDKWL 697

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS  +  ++ +  N+    I      +   V ++ + Y    +     K           
Sbjct: 698 LSKLNSTVKAVDANLGAYKIPETTRVLEEFVDDMSNWYVRRGRERYWAKGMEQDKVNAYM 757

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A  +   +P +A  I+  L
Sbjct: 758 TLYTALVTIAQTVAPMLPFMAEDIYQNL 785



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGH    +I D++ R+  + G +V+   G D HG  +   
Sbjct: 36  KDLPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHNVVRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + + +  +      D+   T     
Sbjct: 96  VEKLLGIDGKEQIEEYGLEPFIQKCKESVWKYKGMWEEFSGKVGFWADMDNPYVTYHDDF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     KKI D+G +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKKIWDQGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|309389593|gb|ADO77473.1| leucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 831

 Score =  156 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 7/203 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-AA 62
           +E  Y+     YP+   H+GH     I DV+AR+ R+ G +VL   G D  G      A 
Sbjct: 32  KENYYVLEMFPYPSGNLHMGHVRVYSIGDVIARYKRMKGYNVLHPMGWDAFGLPAENAAI 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           ++  +  K +   N  + ++    + +SY  D  + T  + ++   +  + ++ +    Y
Sbjct: 92  KHGNIHPKEWTWDNIAHMKEQMKAMGLSYDWDHEVTTAAEDYYKWTQWFFTQMFNDDLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +    E    +++V   A           V   + E +F +++ Y D+LL+ +
Sbjct: 152 KKESTVNWCPSCETVLANEQVVNDA----CERCGTEVDLRDLEQWFLKITDYADRLLADH 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++   +       G
Sbjct: 208 KELDGWPEKVKTMQKNWIGRSEG 230



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 105/289 (36%), Gaps = 33/289 (11%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y             K   W P D ++ G 
Sbjct: 482 VNTSCPKCGKAAKRETDTMDTFVDSSWYFMRYADPKNKEVPFTKEKLDQWFPVDQYIGGI 541

Query: 266 DILRFHAIYWPA-------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +    H +Y            L+ ++       + G +L  G K+SKS GNV+DP ++++
Sbjct: 542 EHAILHLLYARFFTKVVYDMDLTEHVEPFTNWLAQGMVLKDGAKMSKSKGNVVDPKDILD 601

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E G D  R F++      KD  +   G++         G    ++R    + ++ + +  
Sbjct: 602 EYGADTARLFILFAAPPEKDLEWSDKGVE---------GADRFLNRVWRFVTENLELIKD 652

Query: 379 TPGAFTESD-----ESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQK 432
           T      S      +++       ++++ E++      + A++ ++ L +EV  Y +   
Sbjct: 653 TNSKLESSKLDPDAKALYRTMHASIKKVSEDIGSRLNFNTAISSIMELTNEVYSYLN--- 709

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +     T   +   V   L +LL  F P +  +++++L  + 
Sbjct: 710 -------DRSSEETNAPLIKAVAENLVLLLAPFAPFITEELWELLGHSK 751


>gi|149277070|ref|ZP_01883212.1| isoleucine--tRNA ligase [Pedobacter sp. BAL39]
 gi|149231947|gb|EDM37324.1| isoleucine--tRNA ligase [Pedobacter sp. BAL39]
          Length = 1131

 Score =  156 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 81/497 (16%), Positives = 158/497 (31%), Gaps = 53/497 (10%)

Query: 30  IADVLARFHRLDGLDVLFTTGTD----EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD 85
           + D   R+ + +         TD    +    I     N     K +       +R    
Sbjct: 402 VTDFAGRYVKEEYYSDDIRQATDFKPTDVLIAIKLKEDNKAFDVKKYEHSYPHCWRTDKP 461

Query: 86  VLDISYD-DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           VL    D  FIRTT        +    +++   +                + N  E    
Sbjct: 462 VLYYPLDSWFIRTT------AVKEKMVELNKGINWKPEAT------GTGRFGNWLENLVD 509

Query: 145 ADGQYYNAQHNPVQWMEE---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
            +         P+        +      S  +            F+ P     ++     
Sbjct: 510 WNLSRSRYWGTPLPIWRSADGQEEKCIGSVAELNAEIQKAVEAGFMAPGFELKDMHRPYV 569

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
             +  +S +      G K+  +   ++ VW D+         +           +PAD  
Sbjct: 570 DDVILVSPT------GQKMVRELD-LIDVWFDSGAMPYAQWHFPFENKEEFEHAYPADFI 622

Query: 262 VIGKDIL--RFHAIYWPAFLLSA---------------NLPLPKKVFSHGFILHKGEKIS 304
             G D     F  ++  A +LS                 +     V +   +   G K+S
Sbjct: 623 AEGVDQTRGWFFTLHAIAVMLSESSEEIKAINTKVGNPGVAFKNVVSNGLVLDKNGNKMS 682

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           K LGN +DP   IE    DA R++++   +   +  ++ DGL +                
Sbjct: 683 KRLGNGVDPFSTIETYSADATRWYMISNASPWDNLKFNMDGLDEVRRKFFGTLYNTYAFF 742

Query: 365 SVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++   +  ++  +         +E D  ILS+   ++ E+ E+       +A   + + V
Sbjct: 743 ALYANIDKFEIDVNNLTPVAERSELDRWILSLLQALITEVDESYNAYEPTKASRAIQNFV 802

Query: 422 SE--VDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            E   + Y     ++ W+ + T   +A+         +  +A L+    P  A+ ++  L
Sbjct: 803 DEHLSNWYIRLSRRRFWKGEMTADKKAA--YETLYTCLNTIAQLMSPVAPFFADWLYQNL 860

Query: 478 FVADENRCFQSLDQRLK 494
            VAD+N   QS+   L 
Sbjct: 861 AVADKNNDVQSIHLTLW 877



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 32/120 (26%), Gaps = 12/120 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D+  R+  L G  V    G D HG  I  A +     TK  
Sbjct: 46  PPSANGMPGIHHVMARAIKDIFCRYKTLKGFQVKRKGGWDTHGLPIELAVEKKLGITKED 105

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           + +             IS +++     +       +        G              D
Sbjct: 106 IGK------------KISVEEYNTACREEVMKYTDVWNDLTEKMGYWVDLENPYVTYEND 153


>gi|307354496|ref|YP_003895547.1| valyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157729|gb|ADN37109.1| valyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 865

 Score =  156 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 147/417 (35%), Gaps = 35/417 (8%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +  + D+ +   + W         ++ + +     +      N + W   E    RL  +
Sbjct: 325 LKRQEDLEQRVGTCWRCKTPIEILSERQWFVKVHNEEILDAANQINWT-PEHMKMRLENW 383

Query: 173 QDKLLSYYESHPEFIL----PIERRNEVISFVKSGLKDLSLS-------RKTFDWGIKIP 221
             ++   +    + I     P+   ++    +    +DL +        +     G    
Sbjct: 384 ASQMEWDWCISRQRIFATPIPVWFCSKCGEVILPDEEDLPIDPTVDKPKKPCPKCGSTEF 443

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFL 279
              + ++  W+D+  + L  TG+  +      K +PA +   G DI+R  A Y    +  
Sbjct: 444 HGEEDVLDTWMDSSISVLNITGWDGSGTP---KLFPAQIRPQGHDIIRTWAFYTILRSVA 500

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+ + P    + +   +   G K+SKS  N+I P E++ + G D  R +     + G+D 
Sbjct: 501 LTGSHPWENILVNGMVLGDDGFKMSKSRNNIIAPEEILVKYGADPFRQWSAAGASTGQDI 560

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVL 398
            ++ + +        A+     +      +L   +   P     T   D  ++   S  +
Sbjct: 561 VFNWNDVIA------ASRFQTKMWNINRFVLMHLERGYPEDNEATYLVDRWMMHRLSESI 614

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +E+   M+     +A+  +     +   D Y +  K   L  +   R  + LYV    + 
Sbjct: 615 EEVTAAMEGFQFDQAIRAIREFARDVFADNYIELVK-GRLYGSEEGR-GSALYVLRTCLD 672

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL-------DQRLKPGFMLHKTFDPI 506
            L  +L    P  A + +  L    E+   Q         D+    G ++ K    I
Sbjct: 673 ALCRMLAPMTPFFAEECYSYLTGGKESVHAQPWVESGFKDDEAKAEGDLVIKIVSEI 729



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ +  I T   YP    HIG+A+     D +AR+ R+ G +V+F  G D HG      
Sbjct: 35  SKKPQFIIDTPPPYPTGNFHIGNAFNWCYIDFIARYKRMRGYNVMFPQGWDCHGLPTEVK 94

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                 +N    R        S D  +   T   +++   
Sbjct: 95  VEELNGITKNDVPRQQFREMCRELTLKNIEKMRQTMIRCGFSNDWSNEYITMLPKYYRKT 154

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           ++ + ++  KGDIY+  +   +  R E
Sbjct: 155 QLSFLRMYKKGDIYQSEHPVNFCTRCE 181


>gi|254883243|ref|ZP_05255953.1| valyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319642618|ref|ZP_07997264.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254836036|gb|EET16345.1| valyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317385706|gb|EFV66639.1| valyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 875

 Score =  156 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNTNLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMIKPTYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDEERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|315587041|gb|ADU41422.1| valine--tRNA ligase [Helicobacter pylori 35A]
          Length = 872

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTAHLEN--NKNFANKIFNAVSY-LKLKQEAFKDKERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENGAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKNKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|163793116|ref|ZP_02187092.1| Valyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181762|gb|EDP66274.1| Valyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 888

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 132/385 (34%), Gaps = 57/385 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+    + ++   +      +   E+     +P         +++  ++   +SR+   
Sbjct: 351 PVEPWLTDQWYADAATLAKPAIEAVETGKTVFVPKNWEKTYFEWMR-NIQPWCISRQ-LW 408

Query: 216 WG--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTG 243
           WG  I     P                                ++  W  +     +T G
Sbjct: 409 WGHQIPAWYGPDGTVFVEETEEEAAAAAATHYGKTVELTREPDVLDTWFSSALWPFSTLG 468

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH----- 298
           + +      A+++P D+ V G DI+ F    W A ++   L   K V      +H     
Sbjct: 469 WPEETP-ELARYYPGDVLVTGFDIIFF----WVARMMMMGLHFMKDVPFRTVYIHALVRD 523

Query: 299 -KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            KG+K+SKS  NVIDP+E+I+  G DALR+ L    A G+D    +  ++     +    
Sbjct: 524 AKGQKMSKSKNNVIDPLELIDRYGTDALRFTLTAMAAQGRDIKLAEGRVEG--YRNFVTK 581

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N  +R   M     D            +  I+    +    + E ++    + A   +
Sbjct: 582 IWN-AARFCEMNGCAVDPAFDPAACTATVNRWIVGEVRKTSVAVAEAIEAYKFNEAAGAL 640

Query: 418 ISLVS--EVDRYFDAQKPWEL---KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                    D Y +  KP        T    A+     T   + +   LL   +P +  +
Sbjct: 641 YQFFWGSFCDWYLEFTKPILQTPEGGTEHPAAAETRAATAWALNRALHLLHPIMPYVTEE 700

Query: 473 IFDILFVADE----NRCFQSLDQRL 493
           ++       +    +R + +L   L
Sbjct: 701 LWASFGEEADTMLISRPWPALAAEL 725



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 18/174 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D+L R+ R+ G D L+  GTD  G       +  
Sbjct: 35  PYTIMMPPPNVTGSLHMGHALTFTVQDILTRYQRMTGRDALWQPGTDHAGIATQMVVERN 94

Query: 66  GVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 +  ++     +    L  S D      T ++      R
Sbjct: 95  LAAEGVDRRDLGRDAFIEKIWEWKAESGGTIVNQLRRLGASPDWARERFTMDEGLSAAVR 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            ++ ++  +G IY+      +  + +   +D EV              PV+  E
Sbjct: 155 RVFVQLYKEGLIYRDKRLVNWDPKFQTAISDLEVEAKEVDGNLWHFRYPVEGEE 208


>gi|294637816|ref|ZP_06716089.1| valine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089056|gb|EFE21617.1| valine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 136/398 (34%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAAPLAKPAIEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDADGHVYVGRSEEEVRSENGLGAEVTLTQDNDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P ++   G DI+ F         +           +P      +      
Sbjct: 492 NTEALKTFH-PTNVLTSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFKTVYITGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMIDGISLPALLEKRTGNMMQPQLAEKIAKRTEKQFPEGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  + +D       
Sbjct: 611 TDALRFTLSALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGHDCGFNDGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  IL+  +R ++ +RE + +     A   +         D Y +  KP  +  
Sbjct: 668 KIYSLADRWILAEFNRTVKAMREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-VING 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRETKGSMWHLRYPL 204


>gi|212712946|ref|ZP_03321074.1| hypothetical protein PROVALCAL_04044 [Providencia alcalifaciens DSM
           30120]
 gi|212684424|gb|EEB43952.1| hypothetical protein PROVALCAL_04044 [Providencia alcalifaciens DSM
           30120]
          Length = 860

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +    +L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYANIDYMKGQLKMLGFGYDWNREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G          + V+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDSQVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DKLEDWPEQVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 74/183 (40%), Gaps = 20/183 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + +  ++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFVR 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            V R V    +          A T   + +     + + ++ +++ +    + A+A ++ 
Sbjct: 672 RVWRLVHEHAQKGATQPLDISALTAEQKDLRRDLHKTIAKVTDDVGRRYAFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++++      + P   + T  DRA     +  E +  + ++L   +P    +++  L  
Sbjct: 732 FMNKL-----VRAP---QDTEQDRA-----LVQESLDAITLMLSPIIPHACFEMWKALGH 778

Query: 480 ADE 482
            ++
Sbjct: 779 NED 781


>gi|124265411|ref|YP_001019415.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|189030288|sp|A2SC91|SYL_METPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124258186|gb|ABM93180.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 897

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y  + + YP+ + H+GH     I D++AR+ R+ G +VL   G D  G     A
Sbjct: 37  TSRPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGYNVLMPMGWDAFGLPAENA 96

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  V    +   N  + +     L +++D    + T +  ++   +  + K+ +KG  
Sbjct: 97  AIDKKVAPAQWTRDNIADMKSQMQPLGLAFDWSREVATCDPDYYKWNQWFFLKLLEKGIA 156

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V  G           PV+  E  GY+  ++ Y D+LL+ 
Sbjct: 157 YKKTQVVNWDPVDQTVLANEQVIDG----RGWRSGAPVERREIPGYYLAITQYADELLAN 212

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                           V    +  +   +  R  F   I+
Sbjct: 213 VADPASPGFLHGWPERVRLMQEHWIGKSAGVRFAFPHEIR 252



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 81/312 (25%)

Query: 228 MYVWIDALTNYLTTTGYLDN--PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-- 282
           M  ++D+   Y+       +     S+  +W P D ++ G +    H +Y   +  +   
Sbjct: 525 MDTFVDSSWYYMRYCCPDSDAAMVDSRNDYWMPMDQYIGGIEHAVLHLLYARFWTKAMRD 584

Query: 283 ------NLPLPKKVFSHGFILHKG------------------------------------ 300
                 + P  K +F+ G +L++                                     
Sbjct: 585 CGLVKFDEPFTK-LFTQGMLLNESYYREDASGKKRWFYPSEVEVQFDDKGHPVGAIARED 643

Query: 301 ---------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                    EK+SKS  NV++P ++I + G D  R F +      +   +   G      
Sbjct: 644 GQPVQLGGIEKMSKSKNNVVEPRDIIAKFGADTARLFTMFAGPPDQSAAWSDSG------ 697

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES---ILSVCSRVLQEIRENMQNQ 408
              A G    + R  +   K  + +      F ++  +   +      +L+++  +    
Sbjct: 698 ---AEGSFRYLRRLWAFATKQREAVQAAGTDFADASRAAIDLRRDVHLLLRQVSHDYDRL 754

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  ++  + L++ +       +   L  T  DRA+       E +  L   L    P 
Sbjct: 755 QYNTVVSGAMKLLNAL-------ESAALADTAADRAA-----LREGLGILLRALYPAAPH 802

Query: 469 LANKIFDILFVA 480
           +A+ ++  L  A
Sbjct: 803 IAHALWQDLGYA 814


>gi|257065800|ref|YP_003152056.1| isoleucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256797680|gb|ACV28335.1| isoleucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 1037

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/457 (14%), Positives = 153/457 (33%), Gaps = 29/457 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQ-NAGVTTKVFVDQNSRNFRDMADVLDISYDDFI 95
           +       + F    D  G       +      T   + ++ +    + +   I ++   
Sbjct: 332 YQIGRKYGLAFVQPVDLEGCFTETPWKGEFIFDTNEKIWRHLQEEGKVFNKQTIEHNYPH 391

Query: 96  --RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             R      +      + ++S   D      K       ++ D+ + N  E  K      
Sbjct: 392 CWRCHTPLVYYAKPSWYIEMSKFSDAMVENNKSVNWYPQTIGDKRFGNWLENVKDWAISR 451

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 P+   + +      +      L                +E I   +  + ++S+
Sbjct: 452 SRYWGTPLNIWKCDECGHTDTVGSRAELKERAIED--------ISEDIELHRPYVDNVSI 503

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                   +    D   ++ VW D+         Y         +++PAD    G D   
Sbjct: 504 KCDKCGGTMHRVPD---VIDVWFDSGAMPFAQLHYPFEHKEDFEEYFPADFICEGIDQTR 560

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + + +   P    + +   +   G+K+SKS GN +DP  + ++ G DA+R+
Sbjct: 561 GWFYSLMAISTITTGKAPYKNVLVNDLVVDKNGQKMSKSKGNTLDPFALFDKYGADAVRF 620

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLA---NGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           + +          +D+ GL +  N       N        + +  L   +    +     
Sbjct: 621 YSLYVSPPWMQTKFDEKGLIEVKNNFFRTFENVYNFFGLYAETDKLSAEEIAGFSDLKLE 680

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTN 440
           + D+ + S  + +++   E M     ++ +  +   V     + Y   + ++ W  + T+
Sbjct: 681 KIDKWLYSKLNTLIKNYTEAMDAFDYNKVVHMISDFVVEDLSNWYIRRNRKRFWNSELTD 740

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +A  V   T + I  ++ L+    P +A ++F  L
Sbjct: 741 SKKA--VYKTTFDAILTISKLIAPITPFIAEEVFRSL 775



 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 58/165 (35%), Gaps = 19/165 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E+  I       N +P I H     + D+ +R+  + G  VL   G D HG  +   
Sbjct: 37  EDAEEYIIYDGPPTANGRPGIHHVIARTLKDMTSRYKNMQGYKVLKKAGWDTHGLPVEIE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRH 102
            +                       K  V + S  +R+M+D +   Y  DD   T +  +
Sbjct: 97  VEKTLGFHDKNDIEEYGIEKFNKLCKESVWKYSDQWREMSDRMAYLYNMDDPYVTMDNDY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +T   L  K    G IY+G     Y  R        EV +G   
Sbjct: 157 VETEWYLLDKAFKNGYIYEGAKVMPYCPRCGTGLASHEVAQGYQM 201


>gi|158522449|ref|YP_001530319.1| leucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158511275|gb|ABW68242.1| leucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 865

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+  + G +VL   G D  G     AA
Sbjct: 34  KKEKYYLFEMFPYPSGRIHMGHVRNYTIGDVVARYKMMKGFNVLHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R     + +SY  D  I T +  ++   + L+ K+ +KG  Y
Sbjct: 94  IANNTHPARWTRENIAYMRAQLKRMGLSYDWDREIATCDPDYYRWEQWLFVKMYEKGMAY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  GA         + V+  +   +FFR++ Y + LL Y 
Sbjct: 154 RKDAFVNWCDTCATVLANEQVEAGA----CWRCGHAVRQKKLAQWFFRITDYAEDLLVYC 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   +    +       G
Sbjct: 210 DQLPGWPERVTTMQKNWIGKSVG 232



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 103/323 (31%), Gaps = 70/323 (21%)

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGK 265
           S      G K   +    M  ++D+   YL       +           + PAD ++ G 
Sbjct: 483 SAVCPKCGKKARRETD-TMDTFVDSSWYYLRYCSPECDHAIFDPAAVRYWMPADQYIGGV 541

Query: 266 DILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH------------------- 298
           +    H +Y   F         +    P  + +                           
Sbjct: 542 EHAILHLLYSRYFTRVLHDLDLVDFKEPFTRLLTQGMVCKETYACEAHGFLYPEEVGKTD 601

Query: 299 ---------KG-------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                    +G       EK+SKS  NVIDP  ++++ G D  R F +      K   + 
Sbjct: 602 AGDLVCVKCEGPVTVGRVEKMSKSKKNVIDPNFLLDKYGADVTRLFCLFASPPEKGLEWS 661

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRVLQ 399
             G++            N V R     +   DG+ P  G   A  ++ + +     + + 
Sbjct: 662 DQGVEGSYR------FLNRVWRFFVEWMDAIDGVAPYKGDVTALPDALQGLYRKTHQTIG 715

Query: 400 EIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            +  +++     + A++ V+ LV+E+    D Q P            T   V       +
Sbjct: 716 RVTADIEERFHFNTAISAVMELVNEMYTISDRQDP------------TARQVMRHAAETV 763

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
            +LL   VP L  +++  L   +
Sbjct: 764 ILLLSPIVPHLCEELWAGLGHTE 786


>gi|304413512|ref|ZP_07394985.1| leucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284355|gb|EFL92748.1| leucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 873

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + + YP+ + H+GH     I DV++R+  + G +VL   G D  G     A
Sbjct: 30  SSKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQLMLGKNVLQPMGWDAFGLPAESA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    +    +L  SY  D  I T +  ++   +  + ++  KG  
Sbjct: 90  AVKNNTVPAPWTYENIDYMKKQLQLLGFSYDWDREIATCKPDYYHWEQWFFTQLYQKGMA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G          + V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPHDRTILANEQVIDG----CCWRCDSKVERKEIPQWFIKITAYADQLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLESWPEQVKTMQRNWIGRSEG 229



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 73/194 (37%), Gaps = 22/194 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  ++E+ G D +R F++          + + G++       AN     
Sbjct: 619 KMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPAEMTLEWQESGVEG------ANRFLKR 672

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R V   +                 +S+     + + ++ +++  +   + A+A ++ L
Sbjct: 673 LWRLVFNHVGKGATQELDKTCLNPEQKSLRRDLHKTIAKVTDDIGRRQTFNTAIAAIMEL 732

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + +++               P    +   +  E +  +  +L  F P +   ++  L   
Sbjct: 733 MKQLNN-------------APQDTESARALMQESLLAVVKMLYPFSPHICFILWQQLRGE 779

Query: 481 DENRC--FQSLDQR 492
            +     +  +DQ+
Sbjct: 780 GDIDTAPWPVVDQQ 793


>gi|170767152|ref|ZP_02901605.1| valyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170124590|gb|EDS93521.1| valyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              D      +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEDELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|290512177|ref|ZP_06551544.1| valyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289775172|gb|EFD83173.1| valyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENKLGTDVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWILAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVIVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|206577001|ref|YP_002240781.1| valyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206566059|gb|ACI07835.1| valyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MVLSLADRWILAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRHTLVIVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|294633164|ref|ZP_06711723.1| methionine-tRNA ligase [Streptomyces sp. e14]
 gi|292830945|gb|EFF89295.1| methionine-tRNA ligase [Streptomyces sp. e14]
          Length = 671

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 97/529 (18%), Positives = 188/529 (35%), Gaps = 36/529 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             +++ +    PN   H+GH     + AD   RF R+ G +    TG+D++   +   A+
Sbjct: 122 RPVFVFSTPPTPNGDLHLGHLSGPYLGADAYVRFQRMRGAEAWHLTGSDDYQSYVVDRAR 181

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKGDIYKG 122
                     +  S        ++DI  D +  T  +  + D  R  + K+ D G +   
Sbjct: 182 REEREPARTAEHYSAEIAATLRLMDIEVDQYTVTNEDPGYRDGLRGYFSKLVDSGAVTVR 241

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF---FRLSAYQDKLLSY 179
                     +AY  + +V  G  G       N  +   E           + + +    
Sbjct: 242 QTPALVDDGTDAYLYEVDVSGGCPGCGGGTSGNICEECGEPNVCVDLVDPRSSRSQAPPK 301

Query: 180 YESHPEFILPIERRNEVISFVK---------SGLKDLSLSRKTF--------DWGIKIPD 222
                 F+LP+      ++              L D   +R           DWG+   +
Sbjct: 302 RRPVARFVLPLHEFGGEVADHHRLGRVPARLRELADRVFARPRLDLPVTHPSDWGVAPAE 361

Query: 223 D--PQYIMYVWIDALTNYLTTTG------YLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                 +++VW +    +L            D    +  + W   +H  G D   +HA+ 
Sbjct: 362 TTVDGQVIWVWPEMSYGFLHGVEALGGRLGRDWQALTPEQDWKF-VHFFGYDNSFYHAVL 420

Query: 275 WPAFLLSANLPLPKKVFSH--GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +PA    A       +  H   F L +  K S S  + I   +++    VDA+RY+L   
Sbjct: 421 YPALYRLAYPRWNPDIDYHVNEFYLLEDGKFSTSRRHAIWGKQILRPETVDAVRYYLSLT 480

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                   +  +   + V   L +G    ++   + +   Y G+ P  G +T    + L+
Sbjct: 481 RPERHRTNFALEAYTETVRRVLVDGWQGWLNDLGARVAGQYGGVAPDAGVWTPEHTAFLN 540

Query: 393 VCSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                L  + ++       ++RA A++  +V +  R+ +A+    L     D A T + +
Sbjct: 541 GLGIRLAAVADSYGQDGFSLNRAAAELDGIVVDARRFAEAEARTALIAGWQDEARTAVAL 600

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            +   R LA      +P+ A ++   L   D +  + S  + + PG  +
Sbjct: 601 ELAAARLLARAATPIMPRFAARLARALGTTDLS-SWPSQVELVAPGTRI 648


>gi|107103354|ref|ZP_01367272.1| hypothetical protein PaerPA_01004423 [Pseudomonas aeruginosa PACS2]
          Length = 950

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPI 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|84516029|ref|ZP_01003390.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510471|gb|EAQ06927.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 979

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 110/309 (35%), Gaps = 15/309 (4%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW----GIKIPDDPQYIMY 229
              L   E               + F   G +  + +             +  DP  ++ 
Sbjct: 494 YHWLENIEPWCISRQLWWGHQIPVWFAADGSQYCATTEAEAQAMAGPDTALTRDPD-VLD 552

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +      T G+  +      K++P D+ + G+DIL F    +   +  + A  P  
Sbjct: 553 TWFSSGLWPFGTLGWPADDPA--MKYFPGDVLITGQDILFFWVARMMMMSQAVMAQDPFH 610

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                      KGEK+SK+ GNVIDP+++I++ G DALR+   +  A G      +D +K
Sbjct: 611 TIYLHQLVRDAKGEKMSKTKGNVIDPLDMIDQYGADALRFSNAQMAAIGGVLKISEDRIK 670

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                +    + N  S +    +             T  ++ I+    ++ + +   +  
Sbjct: 671 G--YRNFGTKLWNAFSFADHYTIPYPGDPTRPEATLT-LNKWIIGETGKLRETVDAALHA 727

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   + +       D Y +  KP  L+  +             V+ Q  ILL   
Sbjct: 728 YRFNDAADALYAFTWGKVCDWYLEFSKP-ILQGEDAAAKLETEQTLRWVLDQCLILLHPI 786

Query: 466 VPKLANKIF 474
           +P +  +++
Sbjct: 787 MPFITEELW 795



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 64/197 (32%), Gaps = 30/197 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+ R+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMLPPPNVTGHLHVGHAFNHTLMDILTRWKRMQGFDTLWQPGLDHAGIATQLMVEK 95

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRT------ 97
               T               KV+  +        +  R + D +D S   F  +      
Sbjct: 96  DLAATGQPKRVEMGREAFLKKVWDWKGDKGGVIEQQARRLGDSMDWSRSAFTMSGADSAP 155

Query: 98  -TEK--RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            TE     HD    ++  + +KG IY+G     +    E   +D EV       +     
Sbjct: 156 ATEPAGNFHDAVIRVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFK 215

Query: 155 NPVQWMEEEGYFFRLSA 171
            P+   E   Y  +   
Sbjct: 216 YPLAGGETYEYIEKDED 232


>gi|322435729|ref|YP_004217941.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163456|gb|ADW69161.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 855

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y    + YP+   HIGH     I D LARF  + G +VL   G D  G     A
Sbjct: 56  SGKPKYYCLEMLPYPSGALHIGHVRNYAIGDALARFMWMRGHNVLHPMGWDAFGLPAENA 115

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V  + +   N  + +     L + +D    + T    ++   + L+ K+ ++G  
Sbjct: 116 ALKNNVPPREWTLSNIASMKKQFQRLGMGFDWSKEVTTCLPDYYRWNQWLFLKMFERGLA 175

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  +      +++V +   G+ +      V+  +   +F R++ Y D+LL+ 
Sbjct: 176 YRKKSKVNWCPQCATVLANEQVIQ---GRCWRHDETVVEQRDLTQWFLRITKYADELLTG 232

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 233 LDKLEGWPEKVRTMQRNWIGRSEG 256



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 125/349 (35%), Gaps = 45/349 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E  G         D+ +   ES    +LP +           
Sbjct: 456 WGVSRQRYWGTPIPMVYCEACG--------ADEPIPVPESQLPILLPEQIAITQEGGSPL 507

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWP 257
           G     ++      G     +    M  ++D  + Y        N            ++P
Sbjct: 508 GRVPEFVNTTCPKCGGPARRETD-TMDTFVD-SSWYFYRYTDPHNDTAPFDSAKVNYWFP 565

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSHGFILHKGEKISKSLGNV 310
            D ++ G +    H IY   +           N    +++F+ G ++  G K+SKS GNV
Sbjct: 566 IDQYIGGVEHAILHLIYSRFWTKVMRDLGLIVNDEPAERLFTQGMVIKDGAKMSKSKGNV 625

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           + P  +I+  G DA R + +      +D  + ++G+          GI   + +   +  
Sbjct: 626 VSPDLMIDRYGADATRMYALFAAPPDRDLDWQEEGV---------AGISRFLGKIFRLTT 676

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFD 429
           K         G    +D ++L    + + ++  +   +   + +++ ++ LV+E      
Sbjct: 677 K---FAQLEGGEAGPADAALLRKLHQTIAKVTHDFSGRWHFNTSISSIMILVNE----IT 729

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           A +           A+TV       +R L  ++  F P LA ++++ L 
Sbjct: 730 ANE--AAIDAGQVTAATVKST----LRSLIQMIAPFAPFLAAELWETLG 772


>gi|302381491|ref|YP_003817314.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192119|gb|ADK99690.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 865

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 87/245 (35%), Gaps = 13/245 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y+     YP+   H+GHA   ++ DV+AR  R  G DVL   G D  G     A
Sbjct: 32  TGRPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARHKRAQGYDVLHPMGWDAFGMPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N    R    +L +S D      T +  ++   +  + ++  +G +
Sbjct: 92  AMERGIHPKGWTYDNIAQMRAQLKLLGLSLDWSREFATCDPEYYGKQQAWFLELYRRGLV 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G            V+  +   +F R++ Y D L+  
Sbjct: 152 YRKDGTVNWDPVDNTVLANEQVIDG----RGWRSGALVEKRKLNQWFLRITDYADDLIEG 207

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW------GIKIP-DDPQYIMYVWI 232
            ++   +   +    E       G        +   +      G      DP  +     
Sbjct: 208 LKTLDRWPEKVRLMQENWIGKSRGATVWWDFAEAPAFLPASPEGEPNHARDPIEVYTTRP 267

Query: 233 DALTN 237
           D L  
Sbjct: 268 DTLFG 272



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 29/178 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P E+++  GVDA R F++ +    +D  +   G++             
Sbjct: 632 EKMSKSRKNVVAPQEILDSHGVDAGRLFVLSDSPPERDVQWTPGGVEG------------ 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             SR V  +   +DG   +       D ++L    + ++ + E ++    + A+A++ + 
Sbjct: 680 -ASRFVQRVWTLFDGFDGSAAGDPAQDAALLKETHKAIKAVSEGVEGFRFNSAIAKLYAF 738

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+ +                 D  +       E +  LA L+  F P LA + +  L 
Sbjct: 739 VATL----------------RDHDAASGSARREALSALARLIAPFTPHLAEEGWSRLG 780


>gi|200388131|ref|ZP_03214743.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199605229|gb|EDZ03774.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEEEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|85858024|ref|YP_460226.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|123515751|sp|Q2LQK5|SYL_SYNAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85721115|gb|ABC76058.1| leucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 862

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+     YP+ + HIGH     I DV+AR+ R++G +VL   G D  G     AA
Sbjct: 31  SKKKYYLLEMFPYPSGKIHIGHVRNYTIGDVVARYKRMEGYNVLHPMGWDSFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   ++ ++N  + R     +  SY  D  + T E  ++   ++ +  + +KG  Y
Sbjct: 91  IERGIHPSLWTNENITHMRKQLKRMGFSYDWDREVSTCEPVYYRWEQLFFLWMYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +  R +    +++V  G          + V     + +FFR++AY D+LL+  
Sbjct: 151 KKTSSVNWCPRCQTVLANEQVEAG----LCWRCGSEVVEKILDQWFFRITAYIDELLAGC 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +            G
Sbjct: 207 DRLTGWPERVLTMQRNWIGKSYG 229



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 99/294 (33%), Gaps = 71/294 (24%)

Query: 237 NYLTTTGYLDNPDGSK--------AKFWPADLHVIGKDILRFHAIYWPAFLLSA------ 282
           +      Y       K          + P D ++ G +    H +Y   +          
Sbjct: 503 SSWYFERYCCPHFAEKPGLNRQQVDYWMPVDQYIGGIEHAILHLLYARFYTRMLRDFGLV 562

Query: 283 --NLPL----------------PKKVFSHGFILHKGE--------------KISKSLGNV 310
             + P                 P   + +   + +G               K+SKSL NV
Sbjct: 563 GVDEPFTNLLTQGMVCKETTRCPDHGYLYPEEVREGRCIHCLAEVIVGKTEKMSKSLKNV 622

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP  ++ + G D  R F +      KD  +   G++              + R+  +++
Sbjct: 623 VDPDYLVRQYGADTARMFCLFAAPPEKDLEWSDQGVEGSF---------RFIGRTWRIVV 673

Query: 371 KDYDGM-----IPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEV 424
              D +         G      +S+     + ++++R++M +    + A++ ++ LV   
Sbjct: 674 DYLDDLQGIAPFAGDGELEGELKSLRRKTHQTIRKVRDDMGERFHFNTAISAIMELV--- 730

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  +   +P       P    T L V  E I  + +LL   VP L  +++ +L 
Sbjct: 731 NTLYGLPRP-------PREDRTALAVIRETIEAIILLLAPIVPHLTEELWQMLG 777


>gi|332038093|gb|EGI74540.1| leucyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 862

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRTQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y  +LL  
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEQKEIPQWFIKITDYAQELLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +   ++   ++           G
Sbjct: 206 LDKLEDWPEQVKTMQRNWIGRSEG 229



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 27/189 (14%)

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N IDP +VI + G D +R F++      +   +   G++         G    + R   
Sbjct: 628 NNGIDPQQVIAQYGADTVRLFMMFTAPPEQTLEWSDSGVE---------GAHRFLKRVWK 678

Query: 368 MIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
             +  K          A T   + +     + + ++ ++++ +   + A+A ++ L +  
Sbjct: 679 YAVDVKTVGYQALDKSALTNPQKVLRRDLHKAIAKVTDDVERRQTFNTAIAAIMELSN-- 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
                     +L K        V  +  E +  L I+L    P L+++++  L    E  
Sbjct: 737 ----------KLLKAPLSDKQDV-AIANEALEALVIMLAPITPHLSHELWKELGKEGEIL 785

Query: 483 NRCFQSLDQ 491
           +  +  +D+
Sbjct: 786 DAAWPKVDE 794


>gi|77164601|ref|YP_343126.1| valyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433538|ref|ZP_05047046.1| valyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|90101536|sp|Q3JC50|SYV_NITOC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76882915|gb|ABA57596.1| valyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089871|gb|EDZ67142.1| valyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 929

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/401 (16%), Positives = 132/401 (32%), Gaps = 84/401 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F + +   +  +   E+     +P    N++       ++D  +SR+   W
Sbjct: 348 IEPYLTDQWFVKTAPLAEPAIQAVENGQIRFIPENW-NKIYFEWMRNIQDWCISRQ-IWW 405

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    DP+  +YV                            W  +     +T G+ +
Sbjct: 406 GHRIPAWYDPEGKIYVAPTETQARQKYNLPPDLPLEQDPDVLDTWFSSALWPFSTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +    +A F+P  + V G DI+ F    +       +  +P  +          +G+K+S
Sbjct: 466 DTSLLRA-FYPTSVLVTGFDIIFFWVARMIMMGLKFTGEVPFHEVYIHGLVRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNV+DP+++I                                        G DALR+
Sbjct: 525 KSKGNVLDPLDLIDGIDLETLVTKRTGGLMQPAMAKRIEKATRKEFPQGIPSFGCDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES- 386
                   G+D  +D   ++     +  N + N     +  +  +            E  
Sbjct: 585 TFAILATRGRDIRFDLGRIEG--YRNFCNKLWNAARYVLINVSSEISVERQGKPEQAEEN 642

Query: 387 ------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                 +  I+S      QE+ E ++N    R    + +       D Y +  KP     
Sbjct: 643 LMLGAPERWIISRFHSTTQEVIEGIENYRFDRVAQAIYNFTWNEYCDWYLELSKPVLNNP 702

Query: 439 TNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +P+ A     +  V V+  L  L    +P +  +I+  + 
Sbjct: 703 ASPEAAKRRTRHTLVHVLEALLRLAHPIIPFITEEIWQQVG 743



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+HR+ G D L+  G D  G       +N   
Sbjct: 34  CIMIPPPNVTGHLHMGHAFQSTIMDALIRYHRMRGDDTLWQVGADHAGIATQMVVENQLN 93

Query: 68  TT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      + F+ +                R M   +D S + F  T ++       
Sbjct: 94  AEGKTRHDLGREAFIQRVWEWKEHSGGTITRQLRRMGTSVDWSRERF--TMDEGLSQAVG 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ D+G +Y+G     +        +D EV    +  +      P+
Sbjct: 152 EVFVRLYDEGLLYRGKRLVNWDSVLHTAISDLEVISEEENSHLWHMRYPL 201


>gi|329295902|ref|ZP_08253238.1| valyl-tRNA synthetase [Plautia stali symbiont]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 133/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKVAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNNGNVYVGCSEEEVRQENNLAADVTLRQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTSVLVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPDGIVPSG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEVQDCGQNGDE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +  ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MKLSLADRWILTEFNSTVKAYREALDSYRFDIAANILYDFTWNQFCDWYLELTKP-VMNS 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRNTLVTVLEALLRLAHPIIPFITETIWQRVKV 767



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 25/166 (15%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            T I  PN     H+GHA++  I D + R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CTMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMLGKNTLWQAGTDHAGIATQMVVERKIA 95

Query: 68  TTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +    Q                      +R  R + + +D   + F  T ++   +  
Sbjct: 96  AEEGKTRQDYGRDAFIEKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDEGLSNAV 153

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             ++ ++  +  IY+G     +  +     +D EV           
Sbjct: 154 NEVFVRLYKENLIYRGKRLVNWDPKLRTAISDLEVENRESKGSIWH 199


>gi|90411869|ref|ZP_01219877.1| valyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327127|gb|EAS43499.1| valyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 957

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 130/393 (33%), Gaps = 66/393 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V    E  YF  +   QD  +S         +P    NE    V  G  +  +       
Sbjct: 405 VPKQYENMYFSWMRDIQDWCISRQLWWGHR-IPAWYDNE--GKVYVGRTEEEVRANNNLA 461

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            + +      ++  W  +      T G+ +     K    P+D+ V G DI+ F      
Sbjct: 462 PVVVLRQDDDVLDTWFSSALWTFGTQGWPEQTPDLKTFH-PSDVLVTGFDIIFFWVARMI 520

Query: 277 AFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------- 319
              +           +P      +       G+K+SKS GNV+DPI++I+          
Sbjct: 521 MMTMHFCKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIGLEELVEK 580

Query: 320 ----------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                                        G DALR+ L    + G+D  +D   L+    
Sbjct: 581 RCGNMMQPKLAAKIEKQTRKAFEGGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--Y 638

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENM 405
            +  N + N  SR V M  +D D  +           F+ +D+ I S      +E   ++
Sbjct: 639 RNFCNKLWN-ASRYVLMNTEDQDCGMTSDLGNAAEMEFSLADQWIQSQFELAAKEFNAHI 697

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            N  +  A   +   +     D Y +  KP  L K +  +     Y  + V+ +   L  
Sbjct: 698 DNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLWKGSEAQQRATRYTLITVLEKTLRLAH 756

Query: 464 AFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
             +P +   I+  +      V  E    Q+L Q
Sbjct: 757 PVLPYITESIWQSVKPLVAGVDGETIMTQALPQ 789



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                         +  ++  N       L  S D      T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGNITQQLRRLGASVDWERERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLFEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGFMWHFRYPL 204


>gi|302391369|ref|YP_003827189.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203446|gb|ADL12124.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 828

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+ARF R+ G +VL   G D  G     AA
Sbjct: 31  DKPKHYTLEMFPYPSGNLHMGHVRVYSIGDVIARFKRMQGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  N +     L +SYD    + T    ++   + L+ ++  +   Y
Sbjct: 91  IERDIHPNSWTWDNIANMKKQLKSLGLSYDWNREVATCHPDYYKWTQWLFLQLYKEDLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +    E    +++V  G            V+      +FF+++ Y D+LL  +
Sbjct: 151 KQESAVNWCPGCETVLANEQVVNG----GCERCDTEVEEKNLAQWFFKITEYADELLEDH 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E   ++   ++   +       G
Sbjct: 207 ELLDDWPDRVKTMQQNWIGRSEG 229



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 26/276 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D              Y  +    +  D  KA +W   D +V G +    H +Y   F+  
Sbjct: 495 DTMDTFVDSSWYFLRYTDSGNEEEIFDSKKANYWMNVDQYVGGIEHAILHLLYARFFMKF 554

Query: 282 --------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                   A  P  +++ + G +L  G K+SKS GNV+DP+E+I+  G D  R F++   
Sbjct: 555 ISDLGIADAKEPF-ERLLAQGMVLKDGAKMSKSKGNVVDPLEIIDNYGADTARLFMLFAA 613

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +D +G+K    +   + +  + +     I K+ D          +S++ +   
Sbjct: 614 PPQKDLEWDDEGVKGA--SRFLDRVWRVTAEYTDQI-KEIDLDNLQIDNLDKSEKELYRS 670

Query: 394 CSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               ++++ E++ N+   + A++ ++ L++ + +Y D              A   + +  
Sbjct: 671 VHLAIKDVTEDLDNRKQFNTAISSIMELINSLYQYRD------------QAAEENIELIA 718

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             ++   +LL  F P +  +++  L  ++   C + 
Sbjct: 719 LAVKTAILLLSPFAPHITEELWSKLGQSESVHCQEW 754


>gi|217034230|ref|ZP_03439648.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10]
 gi|216943290|gb|EEC22752.1| hypothetical protein HP9810_2g9 [Helicobacter pylori 98-10]
          Length = 872

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 134/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLETPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVVRMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTAHLEN--NKNFANKIFNAVSY-LKLKQESFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKGKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|90409058|ref|ZP_01217184.1| leucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90309839|gb|EAS37998.1| leucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 859

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 87/233 (37%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  SKEKYYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +     L   YD    I T +  ++   +  + K+ +K  +Y
Sbjct: 91  IKNNTAPAGWTYENIAYMKKQLKQLGFGYDWTREIATCKPEYYRWEQWFFTKLLEKDLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY  +LL   
Sbjct: 151 KKMATVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           +   E+   +            G      +  S +        PD    + YV
Sbjct: 207 DKLDEWPEQVRTMQRNWIGRSEGVEMDFRVVGSDEKLSVYTTRPDTVMGVTYV 259



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 109/305 (35%), Gaps = 74/305 (24%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPK 288
           Y +        D  KA +W P D ++ G +    H +Y   F         ++++ P  K
Sbjct: 502 YCSPQSDTQMLDPEKANYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDFGLVNSDEPFKK 561

Query: 289 --------------------KVFSHGF---------------ILHKGE--------KISK 305
                               KV+                    L  G+        K+SK
Sbjct: 562 LLTQGMVLADAFYYEDEKGGKVWISPNDAITQTDDKGKIISAKLENGQVLIFDGMCKMSK 621

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  +I++ G D++R F++      +   +    L+  +       +  L +  
Sbjct: 622 SKNNGIDPQIMIDKYGADSVRLFMMFAAPAEQTLEWSDSALEGSLR--FLKRLWKLANDH 679

Query: 366 VSM-ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
           + +  +   D      G      +++     + ++++ +++  +   + A+A V+ L+++
Sbjct: 680 IELGSVDALDIKSQNDGQ-----KALRRELHKTIKKVTDDIGRRQTFNTAIASVMELMNK 734

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +      + P    K   DRA     +  E +  +  LL    P +  +++++L  +DE 
Sbjct: 735 L-----LKAP---TKNAQDRA-----ILQEALVAVVKLLSPITPHICAELYELLGESDEI 781

Query: 484 RCFQS 488
                
Sbjct: 782 LTAPW 786


>gi|254242525|ref|ZP_04935847.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|126195903|gb|EAZ59966.1| valyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 950

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 126/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S ++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEDAIAAVEDGRIQFVPKQYENMYFSRMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDEAGNVYVGRDEVEVRTKHKLGNEVELRQDEDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKTFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +  +        G+   P 
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--FRNFCNKIWNAANFVIENTDGQDTGVNGEPV 665

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             +  D  I+S   R  QE+   +       A   +   + +     Y +  KP  L   
Sbjct: 666 ELSSVDRWIISQLQRTEQEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKP-VLWDE 724

Query: 440 NP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           N   +R        + V+     L   F+P +  +I+  +
Sbjct: 725 NAPIERQRGTRRTLIRVLETALRLAHPFMPFITEEIWQRI 764



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
           +  I  PN     H+GH +   I D L R+ R+ G + L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLG 93

Query: 60  -----------KAAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +         K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPL 201


>gi|300087851|ref|YP_003758373.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527584|gb|ADJ26052.1| isoleucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 1015

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 8/258 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           ++  W D+    +    Y  +PD         +PAD      D     F++++  + LL 
Sbjct: 544 VIDCWFDSGAMPVAQYHYPFDPDSRGIFDDGRFPADYICEAIDQTRGWFYSLHALSTLLF 603

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                   +     +  KGEK+SKS GNV+ P  VI++ G DA+R++L      G    +
Sbjct: 604 GRPSFQNVICLGHILDGKGEKMSKSRGNVVTPESVIDKHGADAVRWYLFTASPAGNARRF 663

Query: 342 DKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            +  L K V+    + + N+ S  V    +  YD   P P   +E D  ILS  ++++ E
Sbjct: 664 SEQ-LVKEVSRSFMSTLWNVYSFFVLYANIDKYDPSGPEPPVVSELDRWILSELNQLIAE 722

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLA 459
           + ENM+N         + S V  +  ++  +      K+  D    +  Y   + + + A
Sbjct: 723 VTENMENYDPVSGARAMESFVDYLSNWYVRRSRRRFWKSESDADKLSAYYALYQCLVKTA 782

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL  F+P LA+ I+  L
Sbjct: 783 QLLAPFLPFLADTIYLNL 800



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++  +       N +P I H    +  DV+ R+  + G       G D HG  +   
Sbjct: 36  KGNKRFTLYEGPPTANGKPGIHHVLSRVFKDVIPRYKVMKGYYAPRIGGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +   ++  + + +   +  D+   T    +
Sbjct: 96  VEKELGFKSKTDIEKYGIAEFNQKCRESVFRYVNDWNQLTERIGYWVDLDNAYVTMNNSY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG +Y+G     +  R     +  EV  G +
Sbjct: 156 IESGWWVVKQLWDKGLVYQGHKVTPHCPRCGTSLSSHEVALGYE 199


>gi|225554709|gb|EEH03004.1| leucyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 965

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y+ +   YP+   H+GH     I+DVL+RF  + G DVL   G D  G     AA
Sbjct: 62  GKEKAYVLSMFPYPSGALHLGHVRVYTISDVLSRFKHMKGYDVLHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N ++    +     +D  + T     +   + ++  +  +G  Y
Sbjct: 122 IERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIFLMLYQEGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKARVNYDPIDKTVLANEQVDANGCSWRSGAK---VEKLELKQWFFRITAFKEALLKDL 238

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ES     L       V+S  +  L   S +   F       +    +     D L
Sbjct: 239 ES-----LEAGWPERVLSMQRHWLGKSSGAHIKFLVSAPDDNYDIQVFTTRPDTL 288



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 20/234 (8%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + PL K   +        EK+SKS  N +DP   I   G DA+R  ++      +   +D
Sbjct: 651 DAPLIKN--TQTAPNISFEKMSKSKYNGVDPTTCINTYGSDAVRAHMLFSAPVSEVLEWD 708

Query: 343 KDGLK--KRVNADLAN-------GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  +   +R    L          +    S S        D  +P     ++ + +IL  
Sbjct: 709 ESKIVGMERWFNRLWRVVLDSRVSLEGFSSLSAESFKLMNDVRLPDLSTVSDDEAAILLA 768

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTV 452
               +  +   +           + +++S++ ++ ++     L  T P   +  +LY+ +
Sbjct: 769 AHDTITSVSHCLDGMPYG-----LNTVISDLTKFTNSLASSSLPTTTPSPSSQAILYIAL 823

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
             + +L        P LA++ ++ L     +    S   R  P        DP+
Sbjct: 824 SSLLRLLA---PITPALASECWEHLHSPIRHSSTTSSPPRTVPSIFSSPWPDPL 874


>gi|73968521|ref|XP_858962.1| PREDICTED: similar to methionine-tRNA synthetase isoform 4 [Canis
           familiaris]
          Length = 546

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 30/284 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   +  +  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTFYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKAMEEGLTPQEICDKYHAIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQRLLTRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +         R   +  D  V            +G          N ++  + +    R
Sbjct: 380 LQDTVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAIELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                R  + S+++ GLK   ++R  
Sbjct: 440 SCPVVKSSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNARFIIRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             WG  +P +     + YVW DA   YL+ T    +      K 
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN 542


>gi|317177901|dbj|BAJ55690.1| valyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 872

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 134/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSENLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTAHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKNKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLDQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|331681278|ref|ZP_08381915.1| valine--tRNA ligase [Escherichia coli H299]
 gi|331081499|gb|EGI52660.1| valine--tRNA ligase [Escherichia coli H299]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIKPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|189485331|ref|YP_001956272.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287290|dbj|BAG13811.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 818

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 14/269 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y    + YP+   H+GH     I DV ARFH++ G +VL   G D  G     A
Sbjct: 29  QGKEKYYCLVMLPYPSGNLHMGHVRNYSIGDVFARFHKMTGKNVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    +  QN  + R+   VL ISYD      T    ++   +  + K+ ++G I
Sbjct: 89  AIKNKIHPAKWTKQNIAHMREQLKVLGISYDWNREFATCTPEYYRWNQWFFIKMWERGLI 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           ++   +  +         +++V KG          +  Q  + E +F +++ Y D+LL  
Sbjct: 149 FRKSANVNWCPSCNTVLANEQVSKG----LCWRCDSHTQQRDLEQWFIKITDYADELLEG 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           ++    +   +    +       G++         ++ +        I     D L    
Sbjct: 205 HKQLCGWPEQVLSMQKDWIGKSFGME--------IEFAVTGTGKKLKIFTTRPDTLFGAT 256

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                 ++    + K    + + I K ++
Sbjct: 257 FIVVAPEHKIIDEMKSQITNYNEIAKYVI 285



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 113/281 (40%), Gaps = 45/281 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSA- 282
           M  ++D+   Y       ++     +     + P + +V G +    H IY   +     
Sbjct: 497 MDTFVDSSWYYARYCDNRNDNAAFDSAKVNYWMPVNQYVGGIEHACMHLIYSRFWYKVMR 556

Query: 283 -------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                    P  + + + G +   G  +SKS GN++ P E+IE+ G D  R F +     
Sbjct: 557 DLGIVKHGEPF-ENLLTQGMVTLSGSVMSKSKGNIVSPDEIIEKYGADTARLFTLFAAPP 615

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDE-SILSV 393
            K   +  +G++         G    ++R   +    +D +   T  + TE D+  IL +
Sbjct: 616 QKQLDWSMEGVE---------GCWRFINRIWRL----FDIVHTKTEFSATEKDKNDILRI 662

Query: 394 CSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             R ++++  +++     + A++ V+ LV+ +  Y           +N D       ++ 
Sbjct: 663 MHRTIKKVTVDIEKEFQFNTAISSVMELVNALYTY--------KYHSNDD------GISA 708

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
           EV + + +L+  F P L  +I+D L   +      + S D+
Sbjct: 709 EVYKTVILLMTPFTPHLCEEIWDRLGYKEYVSVYPWPSFDE 749


>gi|168232814|ref|ZP_02657872.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194472691|ref|ZP_03078675.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194459055|gb|EDX47894.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205333005|gb|EDZ19769.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENSLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|220904888|ref|YP_002480200.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869187|gb|ACL49522.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 837

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 6/181 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 31  SNKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARNKRMQGYNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N R  R     L  SYD    I T    ++   ++ + ++  KG +
Sbjct: 91  AIKNNTHPAEWTYANIRTMRAQLKRLGYSYDWSREIATCRPEYYQWEQMFFLRLLKKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G          + V   +   +F +++AY D+LL  
Sbjct: 151 YRKKAPQNWCPSCHTVLANEQVIDG----LCWRCDSRVVQKDLTQWFLKITAYGDELLRD 206

Query: 180 Y 180
            
Sbjct: 207 L 207



 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 99/267 (37%), Gaps = 25/267 (9%)

Query: 247 NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN---------LPLPKKVFSHGFI 296
             D    K+W P D ++ G +    H +Y   F                    + + G +
Sbjct: 524 PFDMDAVKYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDMGFFPPELSEPFNNLLTQGMV 583

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L  G K+SKS GNV+DP E+I++ G D +R F +      +D  +   G++    +   N
Sbjct: 584 LKDGGKMSKSKGNVVDPTEMIKKYGADTVRLFCLFAAPAERDFDWSDSGIEGA--SRFIN 641

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
            +  L     + +L           A +     +       +++  E+M      + A+A
Sbjct: 642 RVWRLFVEEQARLLPLKACASTAQDAQSPEARDLRRREHLTVKKAGEDMGDRFQFNTAIA 701

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V+ LV+ +  Y   +K   +  T  DR      V    +  +  LL   +P +  ++++
Sbjct: 702 AVMELVNTM--YISREK---MGSTEGDR-----RVFSSAMATVLTLLSPIIPHVCEELWN 751

Query: 476 ILFVAD--ENRCFQSLDQRLKPGFMLH 500
            L       +  +   D+       + 
Sbjct: 752 RLGHDASLSDEPWPQWDKEATAQDTVT 778


>gi|300821365|ref|ZP_07101513.1| valyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|331680396|ref|ZP_08381055.1| valine--tRNA ligase [Escherichia coli H591]
 gi|300526254|gb|EFK47323.1| valyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|331071859|gb|EGI43195.1| valine--tRNA ligase [Escherichia coli H591]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|300916353|ref|ZP_07133096.1| valyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|307140953|ref|ZP_07500309.1| valyl-tRNA synthetase [Escherichia coli H736]
 gi|331645007|ref|ZP_08346124.1| valine--tRNA ligase [Escherichia coli H736]
 gi|300416332|gb|EFJ99642.1| valyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|331035982|gb|EGI08220.1| valine--tRNA ligase [Escherichia coli H736]
          Length = 951

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|283834893|ref|ZP_06354634.1| valine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291069152|gb|EFE07261.1| valine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 951

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLAEKIAKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGNDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|218129773|ref|ZP_03458577.1| hypothetical protein BACEGG_01352 [Bacteroides eggerthii DSM 20697]
 gi|217987883|gb|EEC54208.1| hypothetical protein BACEGG_01352 [Bacteroides eggerthii DSM 20697]
          Length = 894

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 125/374 (33%), Gaps = 58/374 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 427 GHRIPAYFLPEGGYVVAATPEEALKLAQEKTGNPALKAEDLRQDEDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               + NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 487 LFDGILNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++I+  G D +R  ++     G D  +D    ++  N      
Sbjct: 547 KLGRKMSKSLGNSPDPLDLIDRYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             N +  +  +I   +    +P P A   +     S  + V  E+ +      +  AL  
Sbjct: 601 FNNKIWNAFRLIKGWEVSAEVPMPEAAGLAMRWFESKQNAVAAEVADLFGKYRLSEALMA 660

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P         V   T+     L  LL  F+P +  +
Sbjct: 661 VYKL------FWDEFSSWYLEMIKPAYGQPINKKVYETTIGFFDNLLHLLHPFMPFITEE 714

Query: 473 IFDILFVADENRCF 486
           ++  +F   +    
Sbjct: 715 LWQHIFDRKDGESL 728



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKYAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|253582717|ref|ZP_04859938.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835587|gb|EES64127.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 869

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +E  Y+   + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VSGKENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLHPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    V+   N  N +    +L  SYD    I +    ++   + ++K++ +KG 
Sbjct: 89  AAIQNGAHPAVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +         +++V    DG+ +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPECNTVLANEQV---EDGKCWRHSKTSVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 116/291 (39%), Gaps = 65/291 (22%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPL------------------ 286
            +++P D ++ G +    H +Y   F         LS+N P                   
Sbjct: 530 DEWFPVDQYIGGIEHAVMHLLYARFFHKVLRDLGLLSSNEPFKRLLTQGMVLGASYYSND 589

Query: 287 ------PKKV----------FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                 P++V           +   ++ K EK+SKS  N +DP E++E+ G D  R F++
Sbjct: 590 ENRFLYPEEVEVKGEKAYSKVTGEELVSKIEKMSKSKNNGVDPEEMVEKYGADTTRLFIM 649

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 K+  ++++GL        A      + R V    ++ +       A +  D+++
Sbjct: 650 FAAPPEKELEWNENGLAG------AYRFLTKIWRMVMEHKENMEFGEINLNAVSREDKAL 703

Query: 391 LSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +   ++ ++++ E+++N    + ++A  + L++E   +          KTN   A  V  
Sbjct: 704 IIKLNQTIKKVTESIENDYHFNTSIAATMELINETQDF----------KTNVIEAGNVTS 753

Query: 450 ----VTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLK 494
               +  EV+R + ++L  F P   + +++ +       N  + +  + L 
Sbjct: 754 ESKKIFGEVVRNIILMLSPFTPHFCDDLWEEMGNKGYLFNEAWPTFKEELT 804


>gi|197335538|ref|YP_002155167.1| valyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197317028|gb|ACH66475.1| valyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 957

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 119/360 (33%), Gaps = 58/360 (16%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRANNNLAPVIVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN----- 283
             W  +      T G+ +  +  K    P+D+ V G DI+ F         +  N     
Sbjct: 474 DTWFSSALWTFGTQGWPEQTEDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFNKDENG 532

Query: 284 ---LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAK 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           R V M  +++D  +           F+ +D+ I S      +E   ++ N  +  A   +
Sbjct: 650 RYVLMNTEEHDCGMSLSVEERANMEFSLADKWIESQFELAAKEFNAHLDNYRLDMAANTL 709

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP  L K    +     Y+ + V+ +   L    +P +   I+ 
Sbjct: 710 YEFIWNQFCDWYLELTKP-VLWKGTEAQQQATRYMLITVLEKTLRLAHPVLPYITESIWQ 768



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|41408369|ref|NP_961205.1| valyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81413876|sp|Q73XN8|SYV_MYCPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41396725|gb|AAS04588.1| ValS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 882

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 52/365 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ R+ +          +    I P        ++V   + D  +SR+   
Sbjct: 360 PIEPRLSLQWWVRVESLAKAAGDAVRNGDTVIHPTSMEPRWFAWVDD-MHDWCVSRQ-LW 417

Query: 216 WG--IKIPDDPQY--------------------IMYVWIDALTNYLTTTGYLDNPDGSKA 253
           WG  I I   P                      ++  W  +     +T G+ +       
Sbjct: 418 WGHRIPIWYGPNGEQRCVGPDETPPEGWEQDPDVLDTWFSSALWPFSTLGWPEKTP-ELE 476

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSAN--------------LPLPKKVFSHGFILHK 299
           KF+P  + V G DIL F       F                   +P              
Sbjct: 477 KFYPTSVLVTGYDILFFWVARMMMFGTFVGDDDAITLDGRRGPQVPFTDVFLHGLIRDES 536

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GNVIDP++ ++  G DALR+ L R  + G D    +D +  R + +    + 
Sbjct: 537 GRKMSKSKGNVIDPLDWVDMFGADALRFTLARGASPGGDLAIGEDHV--RASRNFCTKLF 594

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N    ++  +       +P     T++D  IL     V  E+     N    RA   +  
Sbjct: 595 NATRYAL--LNGAQLAELPPLDELTDADRWILGRLEEVRAEVDSAFDNYEFSRACESLYH 652

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +   D Y +      L KT      T    V    +  L  LL   +P +   ++  
Sbjct: 653 FAWDEFCDWYVE------LAKTQLAEGITHTTAVLATTLDTLLRLLHPVIPFITEALWQA 706

Query: 477 LFVAD 481
           L   +
Sbjct: 707 LTGNE 711



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA E  + D L R  R+ G +VL+  G D  G      
Sbjct: 40  SDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSV 99

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +           R + D +D S D F  T ++ 
Sbjct: 100 VEKQLAVDGKTKEDFGRELFIEKVWDWKRESGGAIGGQMRRLGDGVDWSRDRF--TMDEG 157

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                R ++K++ D G IY+      +S   +   +D EV  
Sbjct: 158 LSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQTALSDIEVNY 199


>gi|317014539|gb|ADU81975.1| valyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 872

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 134/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KEYALLEKIEEHAHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN + N  S  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKLFNATSY-LKLKQESFKDKERLNEYQTALGRYAKSRLNLV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E+R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISEFLYHKLSNTD 699



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  ---------KAAQNAGVTTKVFVDQNS-----------RNFRDMADVLDISYDDFIRTTE 99
                    +  +   +  + F+ +                + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREEFIKKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIVQDNYMVNWCTKDG 186


>gi|121596203|ref|YP_988099.1| leucyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166230604|sp|A1WCP8|SYL_ACISJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120608283|gb|ABM44023.1| leucyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 910

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     A
Sbjct: 30  QAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ DKG  
Sbjct: 90  ALKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSREIATCDPDYYKWNQWLFLKMLDKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLKITDYAQELLDH 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   E        ++V    ++ +   +  R  F   I+
Sbjct: 206 VQIGNEKATLTGWPDKVRLMQENWIGKSAGVRFAFPHDIR 245



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 125/392 (31%), Gaps = 41/392 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+   D    G   +      +           +     +D +++    + 
Sbjct: 480 SGNPLAKCEAFLKVDCPCCGKPARRETDTMDTFVDSSWYFMRYCDPKNRDAMVAGGTDYW 539

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTG 243
                       +     G++   L      +  K+  D   + +      L        
Sbjct: 540 MRDQKAATGGSGMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKVDEPFTKLLTQGMVLN 599

Query: 244 YLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295
           ++ +   +K     FWP D+          H       ++ A L  P +     +     
Sbjct: 600 HIYSRRTAKGAKDYFWPHDVE---------HVYDEAGKIVGAKLKNPAESGDGLLPVGTP 650

Query: 296 ILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I ++G   +SKS  N +DP ++IE+ G D  R + +          ++   ++       
Sbjct: 651 IDYEGVGTMSKSKNNGVDPQQLIEKYGADTARLYTMFTAPPELTLEWNDAAVEGSYR--F 708

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQ 408
              + N   + +S I KD                F +  +++      VL+++  + Q  
Sbjct: 709 LRRVWNFGVK-LSAIDKDAALASVAGAASLKDVQFGKEAKALRLEIHTVLKQVDYDYQRM 767

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  ++  + +++      +  K      T+   A       +E    L  +L    P 
Sbjct: 768 QYNTVVSGAMKMINA----LEDFK-----ATDSAGAQVA---LIEGFGILLRVLYPATPH 815

Query: 469 LANKIFDILFVADE-NRCFQSLDQRLKPGFML 499
           +A+ ++D L  A        +   ++ P  ++
Sbjct: 816 IAHVLWDELGYAGTLGDLLDAAWPQVAPDALV 847


>gi|33326393|gb|AAQ08614.1| Leusyl-tRNA synthetase [Agrobacterium vitis]
          Length = 878

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N  + R     + +S D      T +  ++   + L+  + +KG +Y+
Sbjct: 93  QNKVHPKDWTYPNIASMRAQLKSMGLSLDWSREFATCDVEYYQRQQYLFLDMMEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDQTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +   +   +    +       GL    
Sbjct: 209 TLDHWPEKVRLMQKNWIGRSEGLAIRW 235



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 124/369 (33%), Gaps = 41/369 (11%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               V     G+    + + +  +++   Y+ R +A  +   +       ++   +    
Sbjct: 488 TWRNVSCPCCGKAARRETDTMDTFVDSSWYYTRFTAPWEDKPTDPAVANHWLPVDQYIGG 547

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R   + G     +P          L                    
Sbjct: 548 IEHAILHLLYSRFFTRAMRETGHVAVSEP-------FKGLFTQGMVVHETYRLGSGANGE 600

Query: 256 W--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W  PAD+ V   D  R       AFLLS+   +          +   EK+SKS  NVIDP
Sbjct: 601 WVAPADIRVEDVDGTR------RAFLLSSGEEVT---------IGSVEKMSKSKKNVIDP 645

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++   G D  R+F++ +    +D  + + G++          +  L+S + +++    
Sbjct: 646 DDILGSYGADTARFFVLSDSPPDRDVIWSEAGIEGSHR--FVQRLWRLISEAANVL---- 699

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                +  A      ++     + LQ +  ++     ++A+A++  L++          P
Sbjct: 700 -RTSASTPAKDGPGRAVSQAAHKTLQAVGADLDKLAFNKAVARIYELLN------TLAAP 752

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
                +     S V  V       L  ++   +P LA + + +L  +       +Q  D 
Sbjct: 753 LTQVASGNADTSFVAAV-RNATEILIQIIAPMMPHLAEECWAVLGHSGMVAQADWQFFDA 811

Query: 492 RLKPGFMLH 500
            L     + 
Sbjct: 812 ELVAENEVV 820


>gi|293476561|ref|ZP_06664969.1| valyl-tRNA synthetase [Escherichia coli B088]
 gi|291321014|gb|EFE60456.1| valyl-tRNA synthetase [Escherichia coli B088]
          Length = 954

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 377 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 434

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 435 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 494

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 495 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 553

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 554 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 613

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 614 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 671 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 730 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 770



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 33  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 92

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 93  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 151 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 207


>gi|254490598|ref|ZP_05103784.1| leucyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464342|gb|EEF80605.1| leucyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 818

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK +  +   YP+ Q H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKFFCLSMFPYPSGQLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  QN    R     L ++YD    + T +  ++   + L+ ++  KG +Y
Sbjct: 91  IKNQVAPADWTYQNIDYMRGQLQRLGLAYDWERELATCKPDYYRWEQWLFTRLYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D     +++V  G            V+  +   +F +++ Y D+LL+  
Sbjct: 151 KKTASVNWDPVDNTVLANEQVIDG----RGWRSGALVEKRDIPQWFMKITDYADQLLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           +    +   +            G     D++ S          PD    + YV
Sbjct: 207 DQLEGWPEQVRTMQANWIGRSEGVQIDFDIAESSDKLSVYTTRPDTLMGVSYV 259



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 124/377 (32%), Gaps = 45/377 (11%)

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
             + E   N      G   Q Y     P+    E G      +     L           
Sbjct: 406 QNKGERQVNYRLRDWGVSRQRYWGTPIPIINCPECGSVAVPESDLPVRLPEDVIVDGSGS 465

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           PI+   E                K  + G     +       + ++   Y   T   ++ 
Sbjct: 466 PIKSMPEFYQC------------KCPECGTDAERETD-TFDTFFESSWYYARFTCPDNDK 512

Query: 249 DGSKAK---FWPADLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILH 298
                +   + P D ++ G +    H +Y            L +     K + + G +L 
Sbjct: 513 AMLDERADYWLPVDQYIGGIEHAVLHLLYARFFHKLMRDEGLVSGDEPFKNLLTQGMVLK 572

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GN +DP  +I++ G D  R F++          +    ++        N  
Sbjct: 573 DGAKMSKSKGNTVDPQALIDQYGADTARLFMMFAAPPEMSLEWSDKAVEGS------NRF 626

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
              + R+V    +          A +++   +     + L ++ +++  +   + A+A V
Sbjct: 627 LRRLWRAVVEHAEKGSTEKLDTAALSDALLDLRRQTHQTLTKVSDDIGRRHTFNTAIAAV 686

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++ + +             +  +   V+    E +  + ++L    P + ++++  L
Sbjct: 687 MELMNAITK----------NADDSPQGRAVMQ---ESLELVVLMLSPITPHICHQLWQTL 733

Query: 478 FVADE--NRCFQSLDQR 492
              +   +  + ++D+ 
Sbjct: 734 GHQEAVIDATWPNVDEA 750


>gi|212702192|ref|ZP_03310320.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
 gi|212674397|gb|EEB34880.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
          Length = 837

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 6/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 31  SDKPKYYVLEMFPYPSGNIHMGHVRNYSIGDVVARCKRMQGFNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  N R     L  SYD    + T    ++   +  + ++ +KG +
Sbjct: 91  AIKHNTHPAKWTYANIDNMRAQLRRLGYSYDWSREVATCRPEYYRWEQSFFLRLLEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G          + V+  +   +F R++AY D+LL  
Sbjct: 151 YRKKAPQNWCPSCHTVLANEQVIDG----LCWRCDSHVEQKDLTQWFLRITAYGDELLQD 206

Query: 180 YE 181
            +
Sbjct: 207 LQ 208



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 23/252 (9%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP---------AFLLSANLPLP 287
           Y          D    K+W P D ++ G +    H +Y            F         
Sbjct: 515 YTGARNTESAFDMDALKYWLPVDQYIGGVEHAILHLLYARFFTKVLRDLGFYPEGLDEPF 574

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             + + G +L  G K+SKS GNV+DP  +I + G D +R F +      +D  +   G++
Sbjct: 575 TNLLTQGMVLKDGSKMSKSKGNVVDPTAMIAKYGADTVRLFCLFAAPPERDFDWSDSGIE 634

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-Q 406
               +   + +  L       +              T     +       ++++ E+M  
Sbjct: 635 GS--SRFLHRVWRLFMDEAERLSAVKACGAGADDVTTPEARDLRRREHLTVKKVTEDMGN 692

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ V+ LV+ +  Y   +K   L K++ +       V    +  +  LL    
Sbjct: 693 RFQFNTAISAVMELVNAM--YLSREK---LGKSDAE-----NRVFSSAMATVLTLLSPIT 742

Query: 467 PKLANKIFDILF 478
           P L  +++  + 
Sbjct: 743 PHLCEELWQRMG 754


>gi|224024319|ref|ZP_03642685.1| hypothetical protein BACCOPRO_01042 [Bacteroides coprophilus DSM
           18228]
 gi|224017541|gb|EEF75553.1| hypothetical protein BACCOPRO_01042 [Bacteroides coprophilus DSM
           18228]
          Length = 892

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 127/373 (34%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 427 GHRIPAYFLPQGGFVVAETPEEALKLAQEKSGNPSLKLEDLRQDDDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +    ++P     F+     
Sbjct: 487 LFDGINNPGNEEIKYYYPTADLVTGPDIIFFWVARMIMAGYEYMGDMPFKNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 547 KIGRKMSKSLGNSPDPLDLIDKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   ++ ++   E+ +      +  AL  V
Sbjct: 601 FNNKIWNAFRLVKGWEVADIEQPEYARLATEWFDAMLTKTAAEVDDLFGKYRLSEALMAV 660

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 661 YKL------FWDEFSSWYLEMVKPAYGQPIDKATYEKTLGFFDTLLKLLHPFMPFITEEL 714

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 715 WQHIYDRKEGESI 727



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMMGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +++   
Sbjct: 92  VNKLAQQGIKKTDLTREEFLKHAWAWTEEHGGIILKQLRRLGASCDWDRTAFTMDEKRSQ 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|317051073|ref|YP_004112189.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946157|gb|ADU65633.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 822

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 6/181 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y    + YP+ + H+GH     I D +AR+ ++ G +VL   G D  G     A
Sbjct: 32  TSRPKFYCLEMLPYPSGRIHMGHVRNYAIGDAIARYKKMRGYNVLHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    +   N    +     L  SYD    + T  + +    + L+ ++  KG I
Sbjct: 92  AIAHNMDPGEWTWSNIAYMKQQLQKLGFSYDWERELATCSEEYAAFEQQLFIELYKKGLI 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    +++V +G          + V   E E +FFR++AY D+LL  
Sbjct: 152 YRKKAEVNWCDHCKTVLANEQVEEG----RCWRDGSEVLKKELEQWFFRITAYADELLEG 207

Query: 180 Y 180
            
Sbjct: 208 L 208



 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 111/282 (39%), Gaps = 40/282 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWP-----------ADLHVIGKDILRFHAIYWPAFL-- 279
           D +  ++ ++ Y       + K  P            D ++ G +    H +Y   F   
Sbjct: 492 DTMDTFVESSWYFHRYACQEDKTQPINRQAMDYWMDVDQYIGGVEHAVMHLLYARFFHKA 551

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                   +     ++ + G +L  G+K+SKSLGN++DP E+I+  G D +R F +    
Sbjct: 552 LRDLGYVGSDEPFTRLLTQGMVLLGGKKMSKSLGNIVDPDEMIQRYGADTVRLFTLFASP 611

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +++ G++       A      + R V      Y     +PG  ++    +    
Sbjct: 612 PEKDLEWNESGVEG------AFRFLGRLWRLVHEDTTRYGRSAESPGELSDDARKLQQKL 665

Query: 395 SRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++ + +NM+ +   + A+A  + LV+          P+    T+P   +    +  E
Sbjct: 666 HQTIKRVTQNMEGHYHFNTAIAATMELVN-------EMTPFS--DTSPSGKA----LFQE 712

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
            +  L  LL  FVP +  +++  L       N  + + D  L
Sbjct: 713 ALEALCRLLAPFVPHICEELWQDLGHRSLLINEPWPAFDPEL 754


>gi|188527937|ref|YP_001910624.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144177|gb|ACD48594.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 872

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCAMGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +                        + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|328950747|ref|YP_004368082.1| Isoleucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451071|gb|AEB11972.1| Isoleucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 1051

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 126/380 (33%), Gaps = 13/380 (3%)

Query: 143 KGADGQYYNAQHNPVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
              +G+Y     N V W       +   L  +  +   +      +    ER  E +   
Sbjct: 431 HIQEGRYGQWLDNLVDWALSRNRYWGTPLPIWVCEACGHEHLVASYAELKERAREDVDPT 490

Query: 201 KSGLKDLSLSRKTFDWGIK----IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
                                  +     Y++ VW D+         Y      +  + +
Sbjct: 491 SPEFDPHRPHVDRITLTCDRCGGMMRRVPYVIDVWYDSGAMPFAQHHYPFEAQEAFQRGF 550

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PAD    G D     F++++    +L  ++     +     +  KG+K+SKS GNV+DP 
Sbjct: 551 PADFIAEGIDQTRGWFNSLHQLGTMLFDSVAYRNVICHGLVLDEKGQKMSKSKGNVVDPW 610

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E++   G DALR+++        D  +    L + V  D    + N+ S  V+    D  
Sbjct: 611 EIMNTFGADALRWYMYISAPPEADRRFGPS-LVREVVRDYFLTLWNVYSFFVTYANLDKP 669

Query: 375 G--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
                P   A  E D  + S    +++E+ E ++      A   + + V       Y   
Sbjct: 670 NLTARPALEARPEVDRWLASRVQELIEEVTEALEAYDPTAASRALRNFVVEDLSQWYVRR 729

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
            +    K  +            E +  +  L   F P LA  ++  L  + +    +S+ 
Sbjct: 730 NRRRFWKNADAADREAAYATLWEALVAVTHLTAPFTPYLAEALYQNLVRSVDADAPESVH 789

Query: 491 QRLKPGFMLHKTFDPIFPRF 510
               P     K  + +  R 
Sbjct: 790 LSDWPTADPAKKDEALLRRM 809



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +          N +P + HA      D+  R+  + G  V    G D HG  +   
Sbjct: 35  KGGPQYTFYEGPPTANGRPGVHHAQARSYKDLFPRYKTMRGYHVPRKAGWDCHGLPVELE 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V    + +R   + +   +  DD   T  K +
Sbjct: 95  VEKKLGLTSKREIEAYGIDRFNQACRESVFTYEQEWRRFTERIAYWVDLDDAYMTMSKEY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++      ++  KG +Y+      Y  R     +  EV  G  
Sbjct: 155 VESIWWSLGELWKKGLLYRDFKVVPYCPRCSTPLSSHEVALGYK 198


>gi|308276957|gb|ADO26856.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 837

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 119/372 (31%), Gaps = 58/372 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+                 I P         +V   + D  +SR+   W
Sbjct: 295 IEPRLSLQWFVRVEELAAMAGDAVRQGDTVIHPKSAEPRYFEWVDD-MHDWCISRQ-LWW 352

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I I   P+                          ++  W  +     +T G+ +   
Sbjct: 353 GHRIPIWYGPEDADGQRDIVCVGPDEQAPEGYTQDPDVLDTWFSSALWPFSTMGWPEKTP 412

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSH 293
               KF+P  + V   DIL F       F   A                 +P        
Sbjct: 413 -ELEKFYPTSVLVTAYDILFFWVARMMMFGTLASESTPELLGKGRDGRPQVPFTDLFLHG 471

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                 G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N  
Sbjct: 472 LVRDEHGRKMSKSLGNGIDPMDWVERFGADALRFTLARGANPGVDLPVGEDSAQSSRN-- 529

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            A  + N  ++   M       + P     +++D  IL    +V  ++          + 
Sbjct: 530 FATKLYN-ATKFALMNGARVGDL-PAREELSDADRWILDRLEQVRAQVDSYFDRYQFAKG 587

Query: 414 LAQVISLVS--EVDRYFDAQK---PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAF 465
              +   V     D Y +  K   P ++    P+   R      V  +V+  +  +L   
Sbjct: 588 NEALYQFVWGEFCDWYLEFAKVQIPRDVDSATPEERKRGENTQLVLGQVLDAVLRMLHPA 647

Query: 466 VPKLANKIFDIL 477
           +P +   ++  L
Sbjct: 648 MPFVTEVLWKAL 659



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 23/133 (17%)

Query: 32  DVLARFHRLDGLDVLFTTGTDEHGQKIAKA-----------------AQNAGVTTKVFVD 74
           D +AR  R+ G +VL+  G D  G                        +        + +
Sbjct: 2   DSIARRKRMQGFEVLWLPGMDHAGIATQTKVEAMLKEKEGKSRWDYDREEFIGHVWDWKN 61

Query: 75  QN----SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
           +      +  R + D +D S + F  T ++      + ++K++ D+G IY+      +S 
Sbjct: 62  EYGGTIGKQMRAIGDSVDWSRERF--TLDEGLSRAVQTIFKQMYDRGMIYQANRLVNWSP 119

Query: 131 RDEAYYNDDEVYK 143
             E   +D EV  
Sbjct: 120 VLETAVSDIEVVY 132


>gi|154151263|ref|YP_001404881.1| valyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153999815|gb|ABS56238.1| valyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 864

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 119/324 (36%), Gaps = 17/324 (5%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS----LSRKTFDWG 217
            E +  ++            + P  +    +  E++      L                G
Sbjct: 380 MENWIDQMEWDWCISRQRIFATPIPVWTCAKCGEIVVPDDKDLPCDPTLTKPKHPCPKCG 439

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--W 275
                  + ++  W+D+  + L  TG+  +    K K +PA +   G DI+R  A Y   
Sbjct: 440 GNDFVGEEDVLDTWMDSSISVLNVTGWDGSG---KPKIFPAQIRPQGHDIIRTWAFYSIL 496

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L+ + P  + + +   +   G K+SKS GNVI P +++   G DALR +     A 
Sbjct: 497 RSVALTGSKPWDQILVNGMVLGEDGFKMSKSRGNVIVPEDLVGRYGADALRQWAATGAAL 556

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +  + +     +     + N+   ++  + K+         A   +D  +L+  S
Sbjct: 557 GSDIMFSWNDVIAA--SRFQTKMWNIARFALIQLEKEGIDENAPITAL--ADRWLLARLS 612

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +  +   M+N     AL ++     +   D Y +  K   L   +  R  +   V   
Sbjct: 613 DTVATVSARMENYEFDEALKEIREFAWDVLADNYIELAK-GRLYAGDASR-KSACRVLYT 670

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
               L  +L  FVP  A + +  L
Sbjct: 671 AYDALCRMLAPFVPYFAEECYSYL 694



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ +  I T   YP    HIG+A      D  AR+ R+ G +V+F  G D HG      
Sbjct: 35  SKKPQFVIDTPPPYPTGNFHIGNALNWCYIDFFARYKRMKGYNVMFPQGWDCHGLPTEVK 94

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                 +N    R     +  S D  +   T   +++   
Sbjct: 95  VEELNHITKNDVSREEFRKMCRELTLKNIEQMRLTLRRMAFSTDWSNEYITMMPKYYSKT 154

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           ++ + ++   G IY+  +   Y  R E
Sbjct: 155 QLSFLRMYQSGYIYQDEHPVNYCTRCE 181


>gi|153854351|ref|ZP_01995650.1| hypothetical protein DORLON_01645 [Dorea longicatena DSM 13814]
 gi|149753126|gb|EDM63057.1| hypothetical protein DORLON_01645 [Dorea longicatena DSM 13814]
          Length = 1053

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/464 (13%), Positives = 141/464 (30%), Gaps = 24/464 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    DE G                FV +         D   + YD     
Sbjct: 344 KVGRKYDMPFVQLVDEKGNMGETTPFAGL-----FVKKADPEVLKDLDGRGLLYD----- 393

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
              +   +    W+  +      +  +    +   +    ++            G++ + 
Sbjct: 394 -APKFEHSYPHCWRCDTPLIYYARESWFIKMTEVKDDLIANNNTINWIPESIGKGRFGDW 452

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N              ++
Sbjct: 453 IENVQDWGISRNRYWGTPLNIWECECGHQHSIGSIEELKEMSDNCPDDIELHRPYIDDVT 512

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G ++   P+ ++  W D+ +       Y         K +PAD      D    
Sbjct: 513 IKCPCCGKQMHRVPE-VIDCWFDSGSMPFAQHHYPFENKELFEKQFPADFISEAVDQTRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L+    P    +         G+K+SKS GN +DP + +E+ G DA+R++
Sbjct: 572 WFYSLLAISTLIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWY 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTES 386
                A      +    + +     +           +   + D+D    T      +  
Sbjct: 632 FYVNSAPWLPNRFHGKAVVEGQRKFMGTLWNTYAFFVLYANIDDFDATKYTLDYDKLSVM 691

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  +  ++ +  ++ N  I  A   + S V ++ + Y    +     K       
Sbjct: 692 DKWLLSKLNSAIKAVDYDLSNYKIPEAAKALQSFVDDMSNWYVRRSRERFWAKGMEQDKI 751

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    + ++       +P +  +I+  L  + +    +S+
Sbjct: 752 NAYMTLYTALVEICKTAAPMIPFMTEEIYQNLVRSVDESAPESI 795



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D++ R+  + G +V    G D HG  +    +         
Sbjct: 51  PPTANGKPHIGHVLTRVIKDMIPRYRTMKGYEVPRKAGWDTHGLPVELEVEKLLGLDGKD 110

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    + D ++ +      DD   T +    ++     K+I
Sbjct: 111 QIEKYGIEPFIKKCKESVWKYKGMWEDFSNTVGFWADMDDPYVTYDNNFIESEWWALKRI 170

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +YKG     Y  R     +  EV +G  
Sbjct: 171 WDKKLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 203


>gi|26454791|gb|AAH40934.1| MARS2 protein [Homo sapiens]
          Length = 265

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 37/256 (14%)

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
            P+++  H      G+K+SKSLGNV+DP   +    VD  RYFL+R+     D  Y  + 
Sbjct: 3   PPQRICVHSHWTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEK 62

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYD--------GMIPTPGAFTE------SDESIL 391
           + K +N++LA+ +G L++R  +  +   +             PG           D +++
Sbjct: 63  VVKLLNSELADALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALV 122

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA---STVL 448
           S  + + +++ ++  N  I++AL  V S V + + +     PW+L   +P  A    TVL
Sbjct: 123 SAVATLPKQVADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWLGTVL 182

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL--------------DQRLK 494
           +V +E +R    LLQ   P LA+K+   L V+   R    L               +RL 
Sbjct: 183 HVALECLRVFGTLLQPVTPSLADKLLSRLGVSASERSLGELYFLPRFYGHPCPFEGRRLG 242

Query: 495 PGFMLHKTFDPIFPRF 510
           P   L      +FPR 
Sbjct: 243 PETGL------LFPRL 252


>gi|325269789|ref|ZP_08136399.1| valyl-tRNA synthetase [Prevotella multiformis DSM 16608]
 gi|324987762|gb|EGC19735.1| valyl-tRNA synthetase [Prevotella multiformis DSM 16608]
          Length = 897

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 132/385 (34%), Gaps = 59/385 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F R+  + D  LS          P + +N         +KD  +SR+   
Sbjct: 368 PIEPKLSTQWFLRMQHFADIALSPVMDDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 425

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     M  W  +   
Sbjct: 426 WGHRIPAYYFKDAEGKNATVVAETEEEALKLAQEINPSVTAADLEQESDCMDTWFSSWLW 485

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    +++PD  + + ++P    V G DI+ F    +    +      P     F+  
Sbjct: 486 PISVFDGINHPDNEEISYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKFPFKHVYFTGI 545

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 546 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 602

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++          P A   + E   +    V  E+ E  ++  I  AL
Sbjct: 603 ---FNNKIWNAFRLVQGWQTADTEQPQASRIAVEWFDAKLKAVNAEMDEQFRSYRISEAL 659

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P+    +   T E        L  +L  F+P + 
Sbjct: 660 MTVYRL------FWDEFSSWYLEMIKPEYGKPIDRTTYEATLRFFNALLKMLHPFMPFIT 713

Query: 471 NKIFDILFVADENRCFQSLDQRLKP 495
            +++  L+   +       + RL  
Sbjct: 714 EELWQHLYDRKDGESIMCDELRLPA 738



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T ++    
Sbjct: 92  VNRLAQEGIKKTDLTREQFLEHAWDWTREHGGIILKQLRRLGCSCDWDRTAFTMDETRSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYNKGYIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|237727527|ref|ZP_04558008.1| valyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229434383|gb|EEO44460.1| valyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 875

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 124/373 (33%), Gaps = 57/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPTKYKNT-YKNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAETAEEALKLAQEKTGNANLKMEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 -TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G  +  +     ++P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFNGINNPNNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLAAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   S+ ++   E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWEVADIAQPEYARLATEWFESMLAKTAAEVADLFGKYRLSEALMAV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANKI 473
             L      +++    W L+   P     +   T E        L  LL  F+P +  ++
Sbjct: 644 YKL------FWNEFSSWYLEMIKPAYGQPIDKATYEKTLGFFDNLLKLLHPFMPFITEEL 697

Query: 474 FDILFVADENRCF 486
           +  ++   E    
Sbjct: 698 WQHIYDRKEGESL 710



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +K   +
Sbjct: 92  VNKLAGQGIKKTDLSRDEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDKERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEDDAEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|168262482|ref|ZP_02684455.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205348762|gb|EDZ35393.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 951

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEEEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|62182901|ref|YP_219318.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224586299|ref|YP_002640098.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|81309503|sp|Q57GC5|SYV_SALCH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|62130534|gb|AAX68237.1| valine tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224470827|gb|ACN48657.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322717404|gb|EFZ08975.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 951

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|258545170|ref|ZP_05705404.1| leucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519595|gb|EEV88454.1| leucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 868

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 6/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  TREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N  V    +   N    ++    L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MNHQVAPAAWTYSNIDYMKNQLKSLGFAIDWSRELATCKPDYYRWEQWLFTRLFEKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   Y+FR++ Y ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYFRITDYAEELLRDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++   +   ++           G+      R     G+        +     D L  
Sbjct: 207 DTLDGWPERVKTMQRNWIGKSRGMNVRFALRADSRAGLSADQHNVQVFTTRPDTLFG 263



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 69/184 (37%), Gaps = 28/184 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++++ G D  R + +          + + G++         G   
Sbjct: 631 EKMSKSKNNGVDPEALVKKYGADTARLYTMFTSPPESTLEWSESGVE---------GAHK 681

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            + R  +      D + P P   +  D   +++       L+  + + +    +  ++  
Sbjct: 682 YLKRLWAYAHDHRDQLDPAPVEHSALDSKHKTLRHAIHEQLRSAQFDYERNQYNTVVSSA 741

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +++             L +  P+       +  E +R L ++L    P +A  ++D L
Sbjct: 742 MKILN------------TLGEVAPEEKR----LRSEGLRILLLILAPITPHIAAALWDEL 785

Query: 478 FVAD 481
             A 
Sbjct: 786 GYAG 789


>gi|30249126|ref|NP_841196.1| leucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|48428538|sp|Q820M7|SYL_NITEU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30138743|emb|CAD85050.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 869

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+ + H+GH     I DVL+R+ R+ G +V+   G D  G     AA
Sbjct: 31  DRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYRRMQGYNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    R     L   I +   + T + +++   + L+ ++ +KG  Y
Sbjct: 91  IQKGVPPAKWTYDNIAYMRSQLQSLGFAIDWQRELATCDPQYYRWNQWLFLRMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+  ++ Y D+LL+  
Sbjct: 151 QKTQVVNWDPVDQTVLANEQVIDG----CGWRTGAVVEKREIPGYYLAITRYADELLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E  P +   ++           G
Sbjct: 207 EKLPGWPERVKTMQANWIGKSFG 229



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 73/194 (37%), Gaps = 19/194 (9%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N IDP E+IE+ G D  R F++      +   +   G++          +   V
Sbjct: 625 MSKSKNNGIDPQEIIEQYGADTARLFMMFASPPTQTLEWSDAGVEGAFR--FLKRLWRQV 682

Query: 363 SRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
                +  +        P     +D   +     + + ++ ++++ +   + A+A ++ L
Sbjct: 683 YLHRQLDGEAAATTTLVPHQEYPADLRDLRCQLHQTIVKVTDDLERRHTFNTAIAAIMEL 742

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++E+        P                +  E +  + +LL   VP + + ++  L   
Sbjct: 743 MNELSD-VQGTHP------------AARQLMQEALENIVLLLSPIVPHICHVLWRELRPG 789

Query: 481 DE--NRCFQSLDQR 492
            E  ++ +   D +
Sbjct: 790 TELLDQPWPQADDQ 803


>gi|260912265|ref|ZP_05918816.1| valine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633566|gb|EEX51705.1| valine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 878

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 130/395 (32%), Gaps = 58/395 (14%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    H P++      +F ++  + D  L           P + +N 
Sbjct: 330 LMEKTEDYNNKVGYSERTHVPIEPKLSTQWFLKMQHFADLALQPVMDDDIAFYPQKYKNT 389

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 390 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFTANGKRECVVALNAEEALTKAKAVCGTLTA 447

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYW 275
              +  +  +  W  +    ++    ++ PD  +   ++P    V G DI+ F    +  
Sbjct: 448 TDLEQDEDCLDTWFSSWLWPISVFNGINQPDNEEINYYYPTSDLVTGPDIIFFWVARMIM 507

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     +P     F+       G K+SKSLGN  DPIE+IE+ G D +R  ++     
Sbjct: 508 AGYEYRGKMPFKNVYFTGIVRDKLGRKMSKSLGNSPDPIELIEQYGADGVRMGMMLSAPA 567

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+   ++  N        N +  +  ++        P P A   + +   +   
Sbjct: 568 GNDILFDEALCEQGRN------FNNKIWNAFRLVKGWEVSDQPQPEASRIACQWFEAKLR 621

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV- 454
           +  +E+ +      I  AL  V  L      ++D    W L+   P   S +   T    
Sbjct: 622 QTNEELNDLFSKYRISEALMAVYRL------FWDEFSSWYLEMVKPAYGSPIDSHTYNAT 675

Query: 455 ---IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                 L  +L  F+P +  +++  +    E    
Sbjct: 676 LRYFETLLNMLHPFMPFITEELWQHIAERKEGESI 710



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GRAPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  ++          L  S  +D    T +    +
Sbjct: 92  VAKLAEKGVKKTDLSRDEFLKHAWEWTHEHGGIILKQLRRLGASCDWDRTAFTMDDERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVLKVFCDLYEKGLIYRGVRMVNWDPQAQTALSDEEVVYKEEH 194


>gi|219852654|ref|YP_002467086.1| valyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546913|gb|ACL17363.1| valyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 863

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 79/463 (17%), Positives = 151/463 (32%), Gaps = 39/463 (8%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVT--TKVFVDQNSRNFRDMADVLDISYD------D 93
           G +V      DE       +      T   K  V    ++  D+   +D+          
Sbjct: 245 GHEVPLI--EDEAVDPAFGSGAVMICTFGDKQDVHWWKQHHLDLRTAIDLHGKMTPIAGK 302

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY---YNDDEVYKGADGQYY 150
           F   T +          ++                  R +      ++ + +   + +  
Sbjct: 303 FCGMTTEECRAAVLDAMREAGILKRQEPLEQRVGTCWRCKTPIEILSERQWFVKINQEEI 362

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL----PIERRNEVISFVKSGLKD 206
               + V+W   E    R+  +  K+   +    + I     P+    +    +     D
Sbjct: 363 LDAAHQVKW-NPEHMLLRMEDWVGKMEWDWCISRQRIFATPIPVWFCKDCGEMILPEEAD 421

Query: 207 LS-------LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           L         +      G       + ++  W+D+  + +  TG+       K   +PA 
Sbjct: 422 LPIDPTVDTPAHPCPKCGSTTFIGEKDVLDTWMDSSISVMNVTGWDGTG---KPAHFPAQ 478

Query: 260 LHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +   G DI+R  A Y    A  L+   P  + + +   +   G K+SKS GN+I P E+I
Sbjct: 479 IRPQGHDIIRTWAFYSILRAVALTGGAPWEEILVNGMVLGEDGFKMSKSRGNIIAPEEII 538

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G D LR +     A G D  ++ + +     +     + N ++R V M L   +   
Sbjct: 539 CKYGADGLRQWAAAGAATGSDIMFNWNDVVAA--SRFQTKLWN-ITRFVVMQLDRAEYRH 595

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
             P     +D  + +  +  + E+   M      RAL  +     E   D Y +  K   
Sbjct: 596 QEPTVL--ADRWLSAKLAATVAEVTAAMDAYQFDRALRAIREFAWEVLADEYIELVKGRL 653

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +       +        +  L  LL  F+P  A + F  + 
Sbjct: 654 YAEGEG--RDSACSTLATTLDALCRLLAPFIPYFAEECFSAIG 694



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + +  I T   YP    HIG+A      D +AR+ R++G +V+F  G D HG      
Sbjct: 35  STKPQFIIDTPPPYPTGNFHIGNALNWCYIDFIARYRRMNGYNVMFPQGWDCHGLPTEVK 94

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +     TK                  N    R     +     + +   T +  ++   
Sbjct: 95  VEETHGITKNDVPREEFRRMCRELTIGNIEKMRATMRRMAFTTDWSNEYITMKPEYYRKT 154

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           ++ + ++  KG IY+  +   Y  R E
Sbjct: 155 QMSFLQMLKKGYIYQSEHPVNYCTRCE 181


>gi|261838479|gb|ACX98245.1| valyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 872

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 134/386 (34%), Gaps = 52/386 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTAHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
           ++   LL  F+P ++  ++  L   D
Sbjct: 674 KEALKLLHPFMPFISESLYHKLSNTD 699



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+L R+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILTRYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +                        + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKRLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|166033042|ref|ZP_02235871.1| hypothetical protein DORFOR_02764 [Dorea formicigenerans ATCC
           27755]
 gi|166027399|gb|EDR46156.1| hypothetical protein DORFOR_02764 [Dorea formicigenerans ATCC
           27755]
          Length = 1051

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/505 (13%), Positives = 158/505 (31%), Gaps = 36/505 (7%)

Query: 2   KEREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ 56
           + ++  Y++    Y          HI  A+    A V  ++      D+ F    DE G+
Sbjct: 308 QNKKAFYVTCDT-YVTLTDGTGVVHIAPAFGEDDAKVGRKY------DMPFVQLVDEKGE 360

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
                          FV +         D   + +D        +   +    W+  +  
Sbjct: 361 MGKTTPFAGL-----FVKKADPEVLKDLDGRGLLFD------APKFEHSYPHCWRCDTPL 409

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEEEGYFFRLS- 170
               +  +    +   +    ++            G++ +   N   W      ++    
Sbjct: 410 IYYARESWFIKMTAVKDDLIANNNTINWIPESIGKGRFGDWLENVQDWGISRNRYWGTPL 469

Query: 171 -AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
             ++ +    +       L     N             +++ K    G ++   P+ ++ 
Sbjct: 470 NIWECECGCQHSIGSIEELKSMSDNCPDEIELHRPYIDNVTIKCPKCGKEMHRVPE-VID 528

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLP 287
            W D+ +       Y         K +PAD      D     F+++   + L+    P  
Sbjct: 529 CWFDSGSMPFAQYHYPFENQELFEKHFPADFISEAVDQTRGWFYSLLAISTLIFNKAPYK 588

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +         G+K+SKS GN +DP + +E+ G DA+R++     A      +    + 
Sbjct: 589 NVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYINSAPWLPNRFHGKAVT 648

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405
           +     +           +   + ++D    T      +  D+ +LS  +  ++ + E++
Sbjct: 649 EGQRKFMGTLWNTYAFFVLYANIDEFDATKYTLEYEKLSVMDKWLLSKLNSAIKAVDEDL 708

Query: 406 QNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            N  I  A   + S V ++ + Y    +     K                + ++      
Sbjct: 709 ANYKIPEAAKALQSFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVEICKTAAP 768

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
            +P +   I+  L  + +    +S+
Sbjct: 769 MIPFMTEDIYQNLVRSIDANAPESI 793



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 22/192 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M++R    +          N +PHIGH    +I D++ R+  + G +V    G D HG  
Sbjct: 32  MEDREGCPQYMFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYEVPRKAGWDTHGLP 91

Query: 58  IAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTT 98
           +    + A                     K  V +    + D ++ +      DD   T 
Sbjct: 92  VELEVEKALGLDGKDQIEKYGVEPFIKKCKESVWKYKGMWEDFSNTVGFWADMDDPYVTY 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                ++     KKI DKG +YKG     Y  R     +  EV +G       +     +
Sbjct: 152 HNTFIESEWWALKKIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFK 211

Query: 159 WMEEEGYFFRLS 170
             +E+ Y    +
Sbjct: 212 VKDEDAYILAWT 223


>gi|330938922|gb|EGH42425.1| valyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 665

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 86  TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 143

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 144 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEVALQQDNDVLDTWFSSGLWTFSTLGW 203

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 204 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 262

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 263 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 322

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 323 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 377

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 378 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 437

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 438 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 479


>gi|254700451|ref|ZP_05162279.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261750952|ref|ZP_05994661.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261740705|gb|EEY28631.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 877

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GHA    + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHARNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|254429356|ref|ZP_05043063.1| valyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195525|gb|EDX90484.1| valyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 928

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 132/393 (33%), Gaps = 81/393 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +       ++  E+     +P    N   S+++  L+D  +SR+   W
Sbjct: 348 IEPYLTDQWFVAVEELAKPAIAAVENGDIQFVPKNYENMYFSWMRD-LQDWCISRQ-LWW 405

Query: 217 G--IKIPDD---------------------------PQYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T G+ ++
Sbjct: 406 GHRIPAWYDADGNVYVGRSEEEVRAEHNLGDTPLSQDDDVLDTWFSSALWTFSTLGWPED 465

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            D  +    P D+ V G DI+ F    +       +  +P  K         + G+K+SK
Sbjct: 466 TDALRTFH-PTDVLVTGFDIIFFWVARMIMMTLKFTDQVPFKKVYVHGLVRDNDGQKMSK 524

Query: 306 SLGNVIDPIEVI-------------------------------------EEVGVDALRYF 328
           S GNV+DP+++I                                        G DALR+ 
Sbjct: 525 SKGNVLDPLDMIDGITLDALIDKRTKGLMQPQKEKQITKRTHKDFPDGINPYGTDALRFT 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTES 386
            +   + G+D  +D   ++     +  N I N  +R V M  +  D  +        + +
Sbjct: 585 FLSLASTGRDIKWDMGRIEG--YRNFCNKIWN-AARYVMMNTEGEDCGVTADSDIELSLA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  I+S   R  QE+ + + +     A       +     D Y +  KP  L       A
Sbjct: 642 DRWIISALQRAEQEVSDALDSFRFDVASHAAYEFIWNEYCDWYLELSKP-VLWGDEYSAA 700

Query: 445 ST--VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    V V+  +  L   F+P +  +I+ 
Sbjct: 701 QKRGTRRTLVTVLEAILRLAHPFMPFITEEIWQ 733



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 34  CIMIPPPNVTGSLHMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTDHAGIATQMVVERKLA 93

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
                               +  ++          +  S D      T +    +  R +
Sbjct: 94  GEGTNRHELGREKFLDKVWEWKGESGGTITRQLRRMGASVDWTRERFTMDDGLSNAVREV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++  +G IY+G     +        +D EV    +  +      P+
Sbjct: 154 FVRLHKEGLIYRGKRLVNWDPALHTAISDLEVENVEEQGHMWHFRYPL 201


>gi|170750501|ref|YP_001756761.1| leucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170657023|gb|ACB26078.1| leucyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 861

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 40  RPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGLPAENAAM 99

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N  + RD    + +S D    I T +  ++   + ++    +KG + +
Sbjct: 100 ERKVNPRDWTYANIASMRDQLKAMGLSLDWSREIATCDPDYYKHQQRMFLDFLEKGLVTR 159

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ + + LL+  +
Sbjct: 160 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAEDLLTALD 215

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
               +   +    +       GL
Sbjct: 216 GLDRWPEKVRLMQKNWIGRSEGL 238



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 28/178 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++    A     +  
Sbjct: 630 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQGA--ARFVQKVWR 687

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ +                    +D ++     R L  ++++++    +R +A + +L
Sbjct: 688 LVNAA------------GQAKGDGAADLALRKAAHRALASVQDDIERLRFNRCVAHIYTL 735

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + +               +  R         E    L  L+   +P LA + + +L 
Sbjct: 736 ANAL--------------EDGLRGPVSPAAAKEAAGILVQLIAPMMPHLAEECWSVLG 779


>gi|308063936|gb|ADO05823.1| valyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 872

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLSCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSTTHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +                        + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|300859016|ref|YP_003783999.1| valyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686470|gb|ADK29392.1| valyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331268|gb|ADL21462.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 918

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 119/372 (31%), Gaps = 58/372 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+                 I P         +V   + D  +SR+   W
Sbjct: 376 IEPRLSLQWFVRVEELAAMAGDAVRQGDTVIHPKSAEPRYFEWVDD-MHDWCISRQ-LWW 433

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I I   P+                          ++  W  +     +T G+ +   
Sbjct: 434 GHRIPIWYGPEDADGQRDIVCVGPDEQAPEGYTQDPDVLDTWFSSALWPFSTMGWPEKTP 493

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSH 293
               KF+P  + V   DIL F       F   A                 +P        
Sbjct: 494 -ELEKFYPTSVLVTAYDILFFWVARMMMFGTLASESTPELLGKGRDGRPQVPFTDLFLHG 552

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                 G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N  
Sbjct: 553 LVRDEHGRKMSKSLGNGIDPMDWVERFGADALRFTLARGANPGVDLPVGEDSAQSSRN-- 610

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            A  + N  ++   M       + P     +++D  IL    +V  ++          + 
Sbjct: 611 FATKLYN-ATKFALMNGARVGDL-PAREELSDADRWILDRLEQVRAQVDSYFDRYQFAKG 668

Query: 414 LAQVISLVS--EVDRYFDAQK---PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAF 465
              +   V     D Y +  K   P ++    P+   R      V  +V+  +  +L   
Sbjct: 669 NEALYQFVWGEFCDWYLEFAKVQIPRDVDSATPEERKRGENTQLVLGQVLDAVLRMLHPA 728

Query: 466 VPKLANKIFDIL 477
           +P +   ++  L
Sbjct: 729 MPFVTEVLWKAL 740



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         Q H+GHA +  + D +AR  R+ G +VL+  G D  G      
Sbjct: 53  SSKPPFSIVLPPPNVTGQLHMGHALDHTLMDSIARRKRMQGFEVLWLPGMDHAGIATQTK 112

Query: 62  -----------------AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEK 100
                             +        + ++      +  R + D +D S + F  T ++
Sbjct: 113 VEAMLKEKEGKSRWDYDREEFIGHVWDWKNEYGGTIGKQMRAIGDSVDWSRERF--TLDE 170

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 171 GLSRAVQTIFKQMYDRGMIYQANRLVNWSPVLETAVSDIEVVY 213


>gi|320539292|ref|ZP_08038962.1| valyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030684|gb|EFW12693.1| valyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 963

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 134/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 381 IEPMLTDQWYVRTAPLAKVAVDAVEQGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 438

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 439 GHRIPAWYDVNGKVYVGRSEEEVRREYNLAADLVLTQDEDVLDTWFSSGLWTFSTLGWPE 498

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P  + V G DI+ F         +           +P      +      
Sbjct: 499 QTDALKTFH-PTSVMVSGFDIIFFWIARMIMLTMHFIKDENGKPQVPFNTVYMTGLIRDD 557

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 558 EGQKMSKSKGNVIDPLDMVDGISLEDLLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHG 617

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V +  + +D       
Sbjct: 618 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLINTEQHDCSFNGGE 674

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  +R ++  RE +       A   +         D Y +  KP     
Sbjct: 675 KVLSLADRWILAEFNRTVKAYREALDTYRFDLAANILYDFTWNQFCDWYLELTKPVVSNG 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  ++  T  +  + V+  L  L    +P +   ++  
Sbjct: 735 SEAEQRGT-RHTLISVLEALLRLAHPIIPFITETLWQR 771



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 37  TSQESFCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMV 96

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 97  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAGSGGTITRQMRRLGNSVDWERERF--TMDD 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  R ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 155 GLSNAVREVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWYLRYPL 211


>gi|94968356|ref|YP_590404.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550406|gb|ABF40330.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 856

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 5/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+   + YP+   H+GH     I D LARF  + G +VL   G D  G     AA 
Sbjct: 48  KKKFYVLEMLPYPSGALHMGHVRNYAIGDALARFMWMTGHNVLHPMGWDAFGLPAENAAI 107

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 + +   N    +     L  +YD    I T    ++   +  + K  +K   YK
Sbjct: 108 KNQRQPREWTLGNIEAMKKQMRRLGFAYDWSKEIATCLPDYYRWNQWFFIKFFEKNLAYK 167

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V    DG  +  +   V+  E E +FFR++ Y D+LL   +
Sbjct: 168 RKSKVNWCPECATVLANEQV---VDGCCWRHETTRVEQRELEQWFFRITDYADELLRDLD 224

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++           G
Sbjct: 225 QLEGWPEKVKTMQRNWIGRSEG 246



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 113/288 (39%), Gaps = 36/288 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHV 262
            L       G     D    M  ++D  + Y                 +   ++P D ++
Sbjct: 505 WLHTTCPKCGGPATRDTD-TMDTFVD-SSWYFYRYTNPQLTTAPVDTKTIDYWFPIDQYI 562

Query: 263 IGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            G +    H IY            L  N     ++F+ G ++  G K+SK+LGNV+ P +
Sbjct: 563 GGVEHAILHLIYSRFWTKVMRDLGLVHNSEPVTRLFTQGMVIKDGAKMSKNLGNVVAPDD 622

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--- 372
           +I + G DA R + +      +D  +   G++         G+   ++R   +I ++   
Sbjct: 623 MIAKYGADATRMYTLFAAPPDRDLDWQDAGVE---------GVSRFLARVYRLIAQNPIV 673

Query: 373 -YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDA 430
                  T      + + I     + ++ I + +  +   +  +A ++  V+E    + A
Sbjct: 674 HAGPAHYTLAELPANAKKIARKLHQTIKRISDELGGRWHFNTCVAALMEFVNEC---YAA 730

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + +   K   +R      +  +V R++ +LLQ F P +A++++ +L 
Sbjct: 731 PELFANPKEGIER-----TLVADVQRKVTLLLQPFAPYVAHELWAMLG 773


>gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 606

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K+Y+     YP+ + H+GH     I DV+ARF R  G  VL   G D  G     AA
Sbjct: 28  EGKKVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGYRVLHPMGWDAFGLPAENAA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    ++    L  SY  D  I T +  ++   + ++ K  ++G  Y
Sbjct: 88  IKQGIHPADWTYKNIAYMKNQLKRLGFSYDWDREIATCDPEYYRWNQWIFLKFYERGLAY 147

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V  G           PV   E   ++ +++ Y D+LL   
Sbjct: 148 RKLAEVNWCPNDETVLANEQVIDG----RCWRCGTPVIKKEVPSWYLKITHYADRLLEDL 203


>gi|221069982|ref|ZP_03546087.1| leucyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220715005|gb|EED70373.1| leucyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 902

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 6/219 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA
Sbjct: 31  SKPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNKVPPAKWTYENIAYMKKQMQAMGLAIDWSREVATCDPEYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+  ++ Y  +LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLAITNYAQELLDHV 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +   E        ++V    ++ +   +  R  F   IK
Sbjct: 207 QVGNEKATLNGWPDKVRLMQENWIGKSAGVRFAFTHDIK 245



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 112/350 (32%), Gaps = 38/350 (10%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++        ++  + +         +     G++ 
Sbjct: 494 GVVCPCCGKPARRETDTMDTFVDSSWYFMRYCDAKNGEQMVADGADYWMPMDQYIGGVEH 553

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDG---SKAKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +      +K  FWP D+  
Sbjct: 554 AILHLLYARFWTKVMRDLGLVKIDEPFTKLLTQGMVLNHIYSRRTVKGAKEYFWPKDVE- 612

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGFILHKG-EKISKSLGNVIDPIEV 316
                   H       ++ A L +        +     I ++G   +SKS  N +DP ++
Sbjct: 613 --------HVFDESGKIIGAKLKVEVDSADGLLPVGTAIDYEGVGTMSKSKNNGVDPQDL 664

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---- 372
           IE+ G D  R + +          ++   ++          + N  S+  +M +      
Sbjct: 665 IEKYGADTARLYTMFTSPPELTLEWNDAAVEGSYR--FLRRVYNFGSKLTAMDMASAVQG 722

Query: 373 -YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
                      F ++ +++      VL+++  +      +  ++  + +++      +  
Sbjct: 723 VAGAKSLDDVEFGKAAKALRLEIHNVLKQVEYDYSRMQYNTVVSGAMKMINA----LEDF 778

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           K   L  T    A       +E    L  +L    P LA+ ++  L  A+
Sbjct: 779 K--ALDDTGAKVA------LIEGFGILLRVLYPATPHLAHVLWSELGYAN 820


>gi|42560851|ref|NP_975302.1| valyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400731|sp|Q6MTU2|SYV_MYCMS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42492347|emb|CAE76944.1| valine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320951|gb|ADK69594.1| valine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 872

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 35/347 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+   W
Sbjct: 353 VEPYLSDQWFVKMDKFKNMVIDLQNSDNKINFYPNRFSDVLNRWMTDAHDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           Q ++  W  +     +T       +    
Sbjct: 412 GHQIPCWYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYF 471

Query: 254 KFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           K + P  + V G DI+ F    + +     +  +P    +           K+SKSLGN 
Sbjct: 472 KNYFPTSVLVTGYDIIFFWVARMIFQTLEYTKQIPFKDVLIHGLVRDESNRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI   G D+LR FL+     G+D  Y  + +    N    N + N        + 
Sbjct: 532 IDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKILASWN--FINKLWNASRYVFLNLD 589

Query: 371 KDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           +D+             +++ IL+  S+    + E M       A   +   V       Y
Sbjct: 590 EDFKFDPNFYKTDLEITNQWILTQLSKTQTYVYEKMNKYEFSLAGNHLWDFVWNKYCSWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   +   N             V++++ I+L   +P ++ +I+
Sbjct: 650 IEFSK---VNLNNDKFTHQTKQTLFYVLKEILIMLHPLIPFVSEEIY 693



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I         + HIGHA++  + D + RF +L G D LF  G D  G      
Sbjct: 34  SNKPKFSIILPPPNVTGKLHIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSGISTQVK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R     L +S D      T ++  +
Sbjct: 94  VEAKLKQQGIDKNKLGREKFLLEAWKWKEEYANIIRKQWAKLGLSLDYSTEKFTLDEDIN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ K  +   IYK      +    +   ++ EV  
Sbjct: 154 QIVKEIFVKFYNDQIIYKDKQIVNWDPEQKTAISNVEVIY 193


>gi|212704133|ref|ZP_03312261.1| hypothetical protein DESPIG_02188 [Desulfovibrio piger ATCC 29098]
 gi|212672493|gb|EEB32976.1| hypothetical protein DESPIG_02188 [Desulfovibrio piger ATCC 29098]
          Length = 895

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 128/376 (34%), Gaps = 32/376 (8%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        +  + +    ++   A            +       + +   +    
Sbjct: 353 GHCYRCHTVVEPHVSTQWFVATTKMAPAARKAVPELTRILPE------SWAKTYYHWLDN 406

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           +  +    +            +     +            G       + ++  W  +  
Sbjct: 407 IRDWCISRQIWWGHRIPAWTCAQCGELIVAEHDPSSCPKCGCTDLKQDEDVLDTWFSSAL 466

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
              +T G+ +      A ++P  + V G DI+ F    W A ++        +V  H   
Sbjct: 467 WPFSTMGWPEQTK-DLATWYPTSVLVTGFDIIFF----WVARMMMMGQHFMGQVPFHDVY 521

Query: 297 L------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
           L        G K+SKS GNVIDP+E+I++ G D+LR+ L    A G+D    +  ++   
Sbjct: 522 LHALVRDETGRKMSKSTGNVIDPLEMIDKYGCDSLRFTLTAFAAMGRDIRLSEARIEG-- 579

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQ 406
                    N +  +    L +     P P A    +    + IL    +V Q++ + ++
Sbjct: 580 ----YRHFVNKLWNAARFALMNLPETAPAPVALESVEGLHHQWILHRLEQVKQDMDKALE 635

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               + A       +     D Y +  KP      +  R     YV   V+R+L +LL  
Sbjct: 636 EYRFNDAAQLGYKFLWNEFCDWYLELIKP---DMQDEARKPVAQYVLWVVLRELLLLLHP 692

Query: 465 FVPKLANKIFDILFVA 480
            +P +  +I+  L V 
Sbjct: 693 IIPFVTAEIWHALPVP 708



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA    + DVL R  R  G +VL+  GTD  G       + 
Sbjct: 46  EPFSIVIPPPNVTGALHIGHALNQTLIDVLCRHARQKGKNVLWVPGTDHAGIATQNVVER 105

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A                        + +  +     R +   +D +   F  T ++    
Sbjct: 106 ALAKEGKTRQDLGREAFIERVWQWREDYGHRILNQIRALGASVDWTRLRF--TMDEGLSA 163

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++ ++ ++G IYKG Y   +  R      DDEV  
Sbjct: 164 AVRKVFVQLYNEGLIYKGDYIINWCSRCHTALADDEVEH 202


>gi|288940654|ref|YP_003442894.1| leucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896026|gb|ADC61862.1| leucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 851

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    +     L   YD    + T +  ++   + L+ ++ +KG  Y
Sbjct: 91  IQHGIPPSQWTRSNIEYMKGQLKSLGFGYDWERELATCDPDYYRWEQWLFTRMVEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E E +  R++ Y  +LL   
Sbjct: 151 RAKATVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIEQWSVRITDYAQELLDAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLK---DLSLSRKTFDWGIKIPDDPQYIMYV 230
           +    +   +            G+     ++ S +T       PD    + YV
Sbjct: 207 DGLDGWPERVRTMQRNWIGRSEGVHMEFGVAGSDETLGIYTTRPDTVMGVTYV 259



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 79/195 (40%), Gaps = 27/195 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  + E  G D +R + +      +   ++ +G++         G   
Sbjct: 613 EKMSKSKNNGVDPQALTERYGADTVRLYTMFTSPPDQSLEWNDEGVE---------GAFR 663

Query: 361 LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            + R  ++ + + + +     P    E  ++        L++   + + Q  +  ++  +
Sbjct: 664 FIRRLWALAVTEAEAIRAASMPDELDEPAQTARREIHGALKKALYDYERQQFNTVVSGCM 723

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++V+ + R           +++  RA+ +     E +  +  LL    P + + ++  L 
Sbjct: 724 TMVNTLYRL----------ESSTARAAVIR----EGVGIVLRLLAPIAPHVTHHLWRELG 769

Query: 479 VADE--NRCFQSLDQ 491
             D+  N  +  +D+
Sbjct: 770 FGDDILNADWPRVDE 784


>gi|161619727|ref|YP_001593614.1| leucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260568878|ref|ZP_05839346.1| leucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|189082985|sp|A9M845|SYL_BRUC2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161336538|gb|ABX62843.1| leucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260154262|gb|EEW89344.1| leucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADIARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|311695364|gb|ADP98237.1| leucyl-tRNA synthetase [marine bacterium HP15]
          Length = 861

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++    L   Y  D  + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IANKTAPAKWTYANIEYMKNQLKQLGFGYDWDRELATCKPDYYRWEQWFFARLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  +   +F R++ Y ++LL+  
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVVDG----RGWRSGALVEQKKIPQWFIRITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DQLEDWPEQVKTMQRNWIGKSEG 229



 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 77/184 (41%), Gaps = 26/184 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I+E G D +R F++      +   +   G++         G    
Sbjct: 620 KMSKSKNNGIDPQAIIDEHGADTVRLFMMFAAPPEQSLEWSDSGVE---------GAHRF 670

Query: 362 VSRSVSMILKD-YDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           + R   ++ +    G  P   A + +D  +++       + ++ +++  +L  + A+A V
Sbjct: 671 LKRVWRLVNEHAVAGPAPALDAASLNDDQKNLRRKTHETIAKVSDDISRRLTFNTAIAAV 730

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV +         L+   P        V  E +    ++L   VP + + ++  L
Sbjct: 731 MELLNEVGK---------LQGDEPQ----TRAVRQEALDTAVLVLSPIVPHICHTLWQAL 777

Query: 478 FVAD 481
              +
Sbjct: 778 GHQE 781


>gi|324112118|gb|EGC06096.1| valyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 951

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A + +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAASILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|303237201|ref|ZP_07323771.1| valine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482588|gb|EFL45613.1| valine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 897

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/396 (17%), Positives = 134/396 (33%), Gaps = 59/396 (14%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    + P++      +F  +  + D  L    +      P + +N 
Sbjct: 348 LMEKVEDYDNKVGYSERTNVPIEPKLSTQWFLGMQHFADIALDPVMNDEIEFYPKKYKNT 407

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 408 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFKDQDGKPATVVAENIENALEQAKRINPSIK 465

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIY 274
               +     +  W  +    ++    ++NP+  + K++ P    V G DI+ F    + 
Sbjct: 466 QADLEQESDCLDTWFSSWLWPISVFDGINNPENEEVKYYYPTSDLVTGPDIIFFWVARMI 525

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              +      P     F+     + G K+SKSLGN  DP+E+I + G D +R  ++    
Sbjct: 526 MAGYEYRQTFPFKHVYFTGIVRDNIGRKMSKSLGNSPDPLELIAKYGADGVRMGMMLSAP 585

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +D+   ++  N        N +  +  ++       I  P A   + +   +  
Sbjct: 586 AGNDILFDESLCEQGRN------FNNKIWNAFRLVQGWETADIDQPEANKIAIKWFDAKL 639

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             V  E+ E  ++  I  AL  V  L      ++D    W L+   P+    +   T E 
Sbjct: 640 KEVNAEMEEQFKSYRISEALMTVYKL------FWDEFSSWYLEMIKPEYGKPIDKQTYEA 693

Query: 455 ----IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                  L  +L  F+P +  +++  +F   EN   
Sbjct: 694 TLRFFDTLLKMLHPFMPFITEELWQHIFDRKENESI 729



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRHARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
            N                       + D++          L  S D      T +++  +
Sbjct: 92  VNKLAEQGIKKTDLTRDEFLKYAWDWTDEHGGIILKQLRKLGCSCDWERTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               ++  + +KG IY+G     +    +   +D+EV    + 
Sbjct: 152 GVIKVFCDLYNKGLIYRGVRMVNWDPSAKTALSDEEVIYKDEH 194


>gi|229588593|ref|YP_002870712.1| valyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229360459|emb|CAY47316.1| valyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 948

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 123/401 (30%), Gaps = 89/401 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDESGKVYVGRDEAEVRAKHNLGADVALQQDNDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTSGLMQPKLAKKIEKQTRDEFADGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +R        V V+     L   F+P +  +I+  L
Sbjct: 722 ENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQLE 93

Query: 68  TT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            T              K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  ATGQSRHDLGREKFLEKIWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGFLWNLKYPL 201


>gi|170730502|ref|YP_001775935.1| leucyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687921|sp|B0U376|SYL_XYLFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167965295|gb|ACA12305.1| leucyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 879

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 6/213 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 33  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  
Sbjct: 93  AIKNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 153 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  ++  P++           GL+     R 
Sbjct: 209 LNTLDDWPEPVKTMQRNWIGRSEGLEIRFEVRD 241



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 67/508 (13%), Positives = 143/508 (28%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 342 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 398

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +G             R +   N      G   Q Y     PV +    G
Sbjct: 399 INSAEFDGLDYQGAFEVLVERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 458

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+  +E                   + G     + 
Sbjct: 459 AVPVPENQLPVILPENVAFSGTGSPIKTDSEWRKT------------TCPECGGPAERET 506

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T         K   +  P D ++ G +    H +Y+  +    
Sbjct: 507 D-TFDTFMESSWYYARYTSPNAREMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 565

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 566 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 625

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 626 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNEAGVE--- 682

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   ++I       +  + ++   
Sbjct: 683 ------GMARFLRRLWTQVHHHASHGPATALDITALDTAQKAIRCKTHNTIARVEDDYGR 736

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 737 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 783

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 784 PHTSHALWQTLGHPETLLEDLPFPKVDT 811


>gi|139437040|ref|ZP_01771200.1| Hypothetical protein COLAER_00174 [Collinsella aerofaciens ATCC
           25986]
 gi|133776687|gb|EBA40507.1| Hypothetical protein COLAER_00174 [Collinsella aerofaciens ATCC
           25986]
          Length = 898

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 138/429 (32%), Gaps = 47/429 (10%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   + C        +E    D          +       ++    E +F  +   +  
Sbjct: 312 TGMTREECREAVIKWFEEHDLLDHVEDLDHSVMHCYRCDAALEPWLSEQWFVAVDKLKGP 371

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-------------- 221
            L    S      P  R  +  +     LKD  +SR+   WG +IP              
Sbjct: 372 ALDAVNSGKVTFHPA-RWTQTYTTWMENLKDWCISRQ-LWWGHRIPVFYCEDCGWEDALT 429

Query: 222 --------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                            + ++  W  +      T G+   P+  +    P    V  +DI
Sbjct: 430 EDTDVCPKCGGHHVHQDENVLDTWFSSQLWTFATQGWPQKPELLEGHH-PTTALVTARDI 488

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           +      +   +      +P    V     +   G ++SKS GN +DP+++I   G DA+
Sbjct: 489 IALWVARMVMSSLYFLDEVPFKDVVIYPTILAKDGSRMSKSKGNGVDPMDLIGMYGADAM 548

Query: 326 RYFLVREIACGKDGFYD------KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
           RY L+      +D  +D         L      + A      +  +   +L + +G  P 
Sbjct: 549 RYNLLTLCTNNQDVKFDANIDKKTKKLIDSPRTEQAKSFVTKIWNASRFLLMNMEGYTPG 608

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
            P   T +D  + S  ++ ++ + E ++N         V         D Y +  K    
Sbjct: 609 EPVVETPADAWMFSRLAKAVKMVTEGIENYTFGDMARGVQQFFWNEVCDWYVEVTK---- 664

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
            +   +         + V+     L+   +P +  +I+D +  +  +   +    R +  
Sbjct: 665 ARLKGEGRLQAQRNLIFVLDTSIRLMHPLMPFVTEEIWDNMPASVLDLDAEGNVDRAEA- 723

Query: 497 FMLHKTFDP 505
            M+ K  +P
Sbjct: 724 LMIAKWPEP 732



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 18/167 (10%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           ++        + H+GHA +  I D + R  R+ G    +  GTD  G            +
Sbjct: 38  VTIPPPNVTGKLHMGHATDDSIQDAIIRMARMRGKSTRWVLGTDHAGIATQTKVDKKLKS 97

Query: 69  ----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILW 110
                              +  +      +    +  S  +D+   T ++ +    R ++
Sbjct: 98  EGISRLEIGRDKFVDACWDWTHEYGGIIVEQIKRMGCSVDFDNERFTMDEDYAQAVRKVF 157

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 G IY+G     +        +DDE     +  +      P+
Sbjct: 158 CDWYHDGLIYRGKRIVNWCPNCTTAISDDEAEYKDEKGHLWHLRYPL 204


>gi|77359977|ref|YP_339552.1| leucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123757688|sp|Q3IJ93|SYL_PSEHT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76874888|emb|CAI86109.1| leucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 862

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 9/239 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     A
Sbjct: 30  ESKEKYYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLKGKNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L   Y  D  I T    ++   +  + K+ +KG +
Sbjct: 90  AIKNKTAPAKWTYENIDYMRTQLKQLGFGYDWDREIATCHPEYYKWEQWFFTKLYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++ Y  +LL  
Sbjct: 150 YKKMSTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEQKEIPQWFIKITDYAQELLDD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +   ++   ++           G       + + +TF      PD    + YV + A 
Sbjct: 206 LDKLEDWPEQVKTMQRNWIGRSEGCDIEFKRTDNNETFSVYTTRPDTFMGVTYVAVAAG 264



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 70/189 (37%), Gaps = 27/189 (14%)

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N IDP  VI + G D +R F++      +   +   G++         G    + R   
Sbjct: 628 NNGIDPQHVIAQYGADTVRLFMMFTAPPEQTLEWSDAGVE---------GAHRFLKRVWK 678

Query: 368 MI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
               +K          A     + +     + + ++ ++++ +   + A+A ++ L +  
Sbjct: 679 YAVDVKTVGFQPLNKTALNNEQKVLRRDLHKAIAKVSDDVERRQTFNTAIAAIMELSN-- 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
                     +L K   +    V  +  E +  + I+L    P L+++++  L    +  
Sbjct: 737 ----------KLLKAPLNSKQDV-AIANEALEAMLIMLAPITPHLSHQLWQELGKEGDIV 785

Query: 483 NRCFQSLDQ 491
           N  +  +DQ
Sbjct: 786 NASWPEVDQ 794


>gi|254703573|ref|ZP_05165401.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754206|ref|ZP_05997915.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261743959|gb|EEY31885.1| leucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADIARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|16763276|ref|NP_458893.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29144755|ref|NP_808097.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213427638|ref|ZP_03360388.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213650371|ref|ZP_03380424.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|81512137|sp|Q8Z118|SYV_SALTI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|25293115|pir||AC1061 valine-tRNA ligase (EC 6.1.1.9) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505584|emb|CAD06936.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29140394|gb|AAO71957.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 951

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|323496135|ref|ZP_08101195.1| valyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323318879|gb|EGA71830.1| valyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 952

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 125/382 (32%), Gaps = 58/382 (15%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRANNNLAPVVVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------ 282
             W  +      T G+ +N D  K    P+D+ V G DI+ F         +        
Sbjct: 474 DTWFSSALWTFGTQGWPENTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFCKDENG 532

Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAK 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFEDGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R V M  ++ D         ++ +D+ I S      +E   ++ N  +  A   +   + 
Sbjct: 650 RYVLMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTIYEFIW 709

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--- 477
               D Y +  KP  L K N  +        + V+ +   L    +P +   I+  +   
Sbjct: 710 NQFCDWYLELTKP-VLWKGNEAQQRGTRRTLITVLEKTLRLAHPVIPYITETIWQSVKPL 768

Query: 478 --FVADENRCFQSLDQRLKPGF 497
              V  E    Q+L Q  +  F
Sbjct: 769 VDGVEGETIMLQALPQFDEANF 790



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|261253956|ref|ZP_05946529.1| valyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937347|gb|EEX93336.1| valyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 957

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 119/360 (33%), Gaps = 58/360 (16%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRANNNLAPVVVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN----- 283
             W  +      T G+ +  +  K    P+D+ V G DI+ F         +  N     
Sbjct: 474 DTWFSSALWTFGTQGWPEQTEDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFNKDENG 532

Query: 284 ---LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAK 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           R V M  +++D  +           F+ +D+ I S      +E   ++ N  +  A   +
Sbjct: 650 RYVLMNTEEHDCGMSLSAEDRANMEFSLADKWIESQFELAAKEFNAHLDNYRLDMAANTL 709

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP  L K    +     Y+ + V+ +   L    +P +   I+ 
Sbjct: 710 YEFIWNQFCDWYLELTKP-VLWKGTEAQQQATRYMLITVLEKTLRLAHPVLPYITESIWQ 768



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|149190549|ref|ZP_01868819.1| valyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835673|gb|EDL52640.1| valyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 952

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 78/418 (18%), Positives = 140/418 (33%), Gaps = 90/418 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +   +      E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAETATKAVEDGEIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEEEVRENNGLAPVVVLRQDDDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P+D+ V G DI+ F         +           +P      +      
Sbjct: 492 NTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFCKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAKKIEKNTRKTFENGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L K
Sbjct: 668 IEYSLADKWIESQFELAAKEFNGHIDNYRLDMAANTIYEFIWNQFCDWYLELTKP-VLWK 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
            N  +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 GNEAQQRGTRRTLITVLEKTLRLAHPVLPYITETIWQSVKPIVDGVEGDTIMLQALPQ 784



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRH 102
            +                + F+D+                  L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|323965647|gb|EGB61101.1| valyl-tRNA synthetase [Escherichia coli M863]
 gi|327250203|gb|EGE61922.1| valyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 951

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNDGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|71898470|ref|ZP_00680642.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
 gi|71731783|gb|EAO33842.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
          Length = 879

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 6/213 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 33  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  
Sbjct: 93  AIKNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 153 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  ++  P++           GL+     R 
Sbjct: 209 LNTLDDWPEPVKTMQRNWIGRSEGLEIRFEVRD 241



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 67/508 (13%), Positives = 142/508 (27%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 342 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 398

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +G             R +   N      G   Q Y     PV +    G
Sbjct: 399 INSAEFDGLDYQGAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 458

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 459 AVPVPENQLPVILPENVAFSGTGSPIKTDTEWRKT------------TCPECGGPAERET 506

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T         K   +  P D ++ G +    H +Y+  +    
Sbjct: 507 D-TFDTFMESSWYYARYTSPNAREMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 565

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 566 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 625

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 626 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNEAGVE--- 682

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   ++I       +  + ++   
Sbjct: 683 ------GMARFLRRLWTQVHHHASHGPATALDITALDTAQKAIRCKTHNTIARVEDDYGR 736

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 737 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 783

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 784 PHTSHALWQTLGHPETLLEDLPFPKVDT 811


>gi|71276301|ref|ZP_00652579.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Dixon]
 gi|71162909|gb|EAO12633.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Dixon]
          Length = 879

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 6/213 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 33  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  
Sbjct: 93  AIKNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 153 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  ++  P++           GL+     R 
Sbjct: 209 LNTLDDWPEPVKTMQRNWIGRSEGLEIRFEVRD 241



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 67/508 (13%), Positives = 142/508 (27%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 342 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 398

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +G             R +   N      G   Q Y     PV +    G
Sbjct: 399 INSAEFDGLDYQGAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 458

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 459 AVPVPENQLPVILPENVAFSGTGSPIKTDPEWRKT------------TCPECGGPAERET 506

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T         K   +  P D ++ G +    H +Y+  +    
Sbjct: 507 D-TFDTFMESSWYYARYTSPNAREMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 565

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 566 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 625

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 626 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNEAGVE--- 682

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   ++I       +  + ++   
Sbjct: 683 ------GMARFLRRLWTQVHHHASHGPATALDITALDTAQKAIRCKTHNTIARVEDDYGR 736

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 737 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 783

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 784 PHTSHALWQTLGHPETLLEDLPFPKVDT 811


>gi|313665195|ref|YP_004047066.1| valine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949462|gb|ADR24058.1| valine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 872

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/348 (19%), Positives = 128/348 (36%), Gaps = 37/348 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++  +++ ++    S         R N+V++   +   D  +SR+   W
Sbjct: 353 VEPYLSDQWFVKMDKFKNMVIDLQNSDNRINFFPNRFNDVLNRWMTNAHDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           Q ++  W  +     +T       +    
Sbjct: 412 GHQIPCWYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYF 471

Query: 254 KFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           K + P  + V G DI+ F    + +     +  +P    +           K+SKSLGN 
Sbjct: 472 KNYFPTSVLVTGYDIIFFWVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI   G D+LR FL+     G+D  Y  + +    N    N + N  SR V + L
Sbjct: 532 IDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKILASWN--FINKLWN-ASRYVFLNL 588

Query: 371 KDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
             +    P         +++ IL+  S+    + E M       A   +   V       
Sbjct: 589 DVHFEFDPNFYKTDLEITNQWILTQLSKTQTYVYEKMNKYEFSLAGNHLWDFVWNKYCSW 648

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           Y +  K   +  +N             V++++ I+L   +P ++ +I+
Sbjct: 649 YIEFSK---VNLSNDKFNYQTKQTLFYVLKEILIMLHPLIPFVSEEIY 693



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K  I         + HIGHA++  + D + RF +L G D LF  G D  G      
Sbjct: 34  SKKPKFSIILPPPNVTGKLHIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSGISTQVK 93

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R+    L +S D      T ++  +
Sbjct: 94  VEQKLKKQGIDKNKLGREKFLLEAWKWKEEYASIIREQWAKLGLSLDYSTEKFTLDEDIN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ K  +   IYK      +    +   ++ EV  
Sbjct: 154 QIVKEIFVKFYNDKIIYKDKQIVNWDPEQKTAISNVEVIY 193


>gi|308062430|gb|ADO04318.1| valyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 872

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLARFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSGKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSIAHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           ++E+ K +       PN     HIGHA  + + D+LAR+ R+DG   L+  G D  G   
Sbjct: 35  IQEKNKRFCLMMPP-PNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIAT 93

Query: 59  AKAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTT 98
               +                        + ++         + +      S   F  T 
Sbjct: 94  QNVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TM 151

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 152 DKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 929

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 113/308 (36%), Gaps = 23/308 (7%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G         IM VW D+ ++++            +   WPADL++ G D     F
Sbjct: 516 KCKCGNHEFTKETDIMDVWFDSGSSHVAVLE------NREGLSWPADLYLEGNDQHRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P  K +     +  +G K+SKSLGN IDP +VI+E G D LR ++ 
Sbjct: 570 QSSLLTSVATKGTAPYRKVLTHGYVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWVA 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    KD LK+   +++   I N     +  I   + D          E D+ 
Sbjct: 630 SSDYTT-DIRISKDLLKQL--SEVYRKIRNTARYILGNINDFNPDTDSVDYNDLNELDKW 686

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAST 446
            L   + +++++ E       H     + +   V   + Y D  K      K +      
Sbjct: 687 ALGRMTNLIKKVNEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSKPDTKERRA 746

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-------FQSLDQRLKPGFML 499
              V  E++  L  +L   +     +I+  +    E+         +  ++++      L
Sbjct: 747 AQTVMYEILHNLVRMLTPVLAFTTEEIWQYMPHRAEDDTESVQLNSWPQVNEKYV-NTAL 805

Query: 500 HKTFDPIF 507
            + ++ IF
Sbjct: 806 SEKWEKIF 813



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+G     ++ D++ ++  + G    +  G D HG  I + 
Sbjct: 47  EGKPSFILHDGPPYANGGIHLGTTLNKVLKDIVVKYKSMSGYYTPYVPGWDTHGLPIEQR 106

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
           A                    + F  +     R+    L +  D      T +       
Sbjct: 107 AIKELGLKRHEVGPVVFREACEGFALKYLDVQRESFKRLGVRADWEHPYITLKPEFEAKQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    D
Sbjct: 167 IEVFGEMATKGHIYKGLKPVYWCPECETALAEAEIEYADD 206


>gi|306841586|ref|ZP_07474283.1| leucyl-tRNA synthetase [Brucella sp. BO2]
 gi|306288332|gb|EFM59695.1| leucyl-tRNA synthetase [Brucella sp. BO2]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   +IL+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQILFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 117/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIYCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEVDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|306844787|ref|ZP_07477372.1| leucyl-tRNA synthetase [Brucella sp. BO1]
 gi|306274959|gb|EFM56729.1| leucyl-tRNA synthetase [Brucella sp. BO1]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEVDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|150398390|ref|YP_001328857.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166231646|sp|A6UEE2|SYL_SINMW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150029905|gb|ABR62022.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 876

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +    V+ +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKVMGLSLDWSREFATCDPEYYQRQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFRITDFSQDLLDSLD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  E+   +    +       GL    
Sbjct: 209 TLDEWPEKVRLMQKNWIGRSEGLSVRW 235



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 22/198 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++         G   
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPDRDVIWSEAGVE---------GAHR 681

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESIL--SVCSRVLQEIRENMQNQLIHRALAQVI 418
            V R   ++ +  +G+     A     E +       R L+ +  +      ++A+A++ 
Sbjct: 682 FVQRVWRLLSEAAEGLSAAEAAPAREGEGLAVSQAAHRTLKAVEADYDKLAFNKAVARIY 741

Query: 419 SLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            LV+          P   +     D+A T      +    L  L+   +P LA + +  +
Sbjct: 742 ELVN------TLAAPLAQIAAGKADQALTA--AVKDAAGILISLIAPMMPHLAEECWRAI 793

Query: 478 FVAD--ENRCFQSLDQRL 493
                   R +   D  L
Sbjct: 794 GGKGLIAERPWPKFDATL 811


>gi|82700587|ref|YP_415161.1| leucyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024884|ref|YP_001935652.1| Aminoacyl-tRNA synthetase, class I [Brucella abortus S19]
 gi|237816173|ref|ZP_04595168.1| leucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260547092|ref|ZP_05822830.1| aminoacyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|123740877|sp|Q2YLH9|SYL_BRUA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238689396|sp|B2S7N1|SYL_BRUA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82616688|emb|CAJ11771.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Leucyl-tRNA synthetase bacterial/mitochondrial, class
           Ia [Brucella melitensis biovar Abortus 2308]
 gi|189020456|gb|ACD73178.1| Aminoacyl-tRNA synthetase, class I [Brucella abortus S19]
 gi|237788635|gb|EEP62848.1| leucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260095457|gb|EEW79335.1| aminoacyl-tRNA synthetase [Brucella abortus NCTC 8038]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PAD 259
                   R+T              M  ++D+   Y         +  +   A  W P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTNRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----V 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|41916|emb|CAA29642.1| unnamed protein product [Escherichia coli]
          Length = 860

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKINAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL---------------- 280
           Y          D   A +W P D+++ G +    H +Y+  F                  
Sbjct: 503 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 562

Query: 281 -----------------SANLPLPKKVFSHGFILHKGE------------------KISK 305
                            +        V +      KG                   K+SK
Sbjct: 563 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 622

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 623 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 676

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE+ +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 677 VYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 736

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 737 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 783

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 784 NAPWPVADEK 793


>gi|119357821|ref|YP_912465.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355170|gb|ABL66041.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 904

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 130/366 (35%), Gaps = 50/366 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F R+    ++ L           P    N         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVRMKPLAERALQVVNDGEIRFHPPHWINT-YRHWMENIQDWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    +P                           ++  W  +    LTT G+     
Sbjct: 421 GHRIPAWYEPDGKVWVASSYEEACHLAGTDKLVQEDDVLDTWFSSWLWPLTTLGWTGTHS 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +     F+P    V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 481 DNDDLRAFYPTSTLVTGPDIIFFWVARMIMAGLYFKGDVPFRDVYFTSIIRDMKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ ++     G+D  + ++  +  +  + A  + N  SR 
Sbjct: 541 SLGNSPDPLKVIDTYGTDALRFTIIYIAPLGQDVLFGEEKCE--LGRNFATKLWN-ASRL 597

Query: 366 VSMILKDY----DGMIPTPGAFTESDESI--------LSVCSRVLQEIRENMQNQLIHRA 413
           V M+ + +    D       AF+  + S         +     +L+          ++  
Sbjct: 598 VFMLRERFFSSGDAFEKRYRAFSVDERSFSFAEERVVMQRYHTMLERYHGAFSQFRVNDI 657

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           +  V         D Y +A K         + A   + + V ++  +  +L   +P + +
Sbjct: 658 VKNVYDFFWGDYCDWYLEALKIKLSGVQEGEAAQDAVCLAVHLLEGILKVLHPVMPFITD 717

Query: 472 KIFDIL 477
           +I+  +
Sbjct: 718 EIWHHI 723



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    +            +GH     + D+  R+ R+ G + L+  GTD  G       
Sbjct: 45  EKAPYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYSRMTGREALWLPGTDHAGIATQTVV 104

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+           L IS D    + T ++    
Sbjct: 105 EKKLKKEGVTRHELGRREFLEHVWQWRDEYGGLILRQLRRLGISCDWRRNLFTMDESASQ 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +  +   G IY+G     +    +   +D+EV  
Sbjct: 165 AVVNAFVALYRDGLIYRGTRIINWCPVSQTALSDEEVIM 203


>gi|319787827|ref|YP_004147302.1| leucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466339|gb|ADV28071.1| leucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 883

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 36  SDKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N  + R    +L   I +     T    ++   + ++ ++  KG  
Sbjct: 96  AIKNKVAPAKWTYKNIEHMRSQLKLLGYAIDWSREFATCTPEYYVHEQRMFVRLMRKGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 156 YRKNAVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +  P +   ++           GL
Sbjct: 212 LDELPGWPDSVKTMQRNWIGRSEGL 236



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 122/357 (34%), Gaps = 50/357 (14%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLK 205
                        E E   F          + Y S     +  +R N  +       G++
Sbjct: 494 WRKCTCPECGAPAERETDTFDTFMESSWYYARYTSPKAREMVDKRGNYWLPVDQYIGGIE 553

Query: 206 DLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLT---TTGYLDNPDGSKAKFWPADLH 261
              L    F +  K+  D + +        L         T Y  N DGSK    PAD+ 
Sbjct: 554 HAILHLMYFRFYHKLLRDARLVDSDEPALNLLTQGMVIADTYYRQNDDGSKDWINPADVD 613

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEV 320
           V   D  R       A                  +L  G EK+SKS  N +DP  ++++ 
Sbjct: 614 VQRDDKGRVTGAVLRAD--------------GQPVLVGGTEKMSKSKNNGVDPQAMVDKY 659

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D +R F +      +   +++ G+         +G+   + R  + + K         
Sbjct: 660 GADTVRLFSMFAAPPEQSLEWNEAGV---------DGMARFLRRLWAQVQKHAAEGAAPA 710

Query: 381 GAFTESD---ESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                 D   +++       ++++  + +  +  + A+A V+ L++ V ++ DA      
Sbjct: 711 LDVAALDAGQKALRRKTHESIEKVCHDYEVRRAFNTAIAAVMELLNAVSKFDDA------ 764

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
             ++  RA     V  E +    +LL    P  ++ ++ +L   +   E+  F   D
Sbjct: 765 --SDQGRA-----VRQEALEAAVLLLNPITPHASHALWQVLGHPETLLEDVPFPKAD 814


>gi|62290672|ref|YP_222465.1| leucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|254689960|ref|ZP_05153214.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254698111|ref|ZP_05159939.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730995|ref|ZP_05189573.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256258215|ref|ZP_05463751.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260755495|ref|ZP_05867843.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260758718|ref|ZP_05871066.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762552|ref|ZP_05874889.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884516|ref|ZP_05896130.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297249064|ref|ZP_06932772.1| leucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309371|sp|Q57B80|SYL_BRUAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|62196804|gb|AAX75104.1| LeuS, leucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|260669036|gb|EEX55976.1| leucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672978|gb|EEX59799.1| leucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675603|gb|EEX62424.1| leucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260874044|gb|EEX81113.1| leucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297174197|gb|EFH33554.1| leucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----V 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|61657517|emb|CAI44428.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 843

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 48  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 108 AIEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 167

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 168 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 223

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 224 LDKLTGWPEHVKTMQRNWIGKSTG 247



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 446 QRYWGAPIPIIYCEKCGIVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKRTKCPICGG 505

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 506 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 556

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 557 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 615

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 616 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FIKRLWNTFYTVLPFVKEENTENLV 673

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 674 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 730

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 731 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 761


>gi|17986526|ref|NP_539160.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|163845384|ref|YP_001623039.1| leucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225628361|ref|ZP_03786395.1| leucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225853251|ref|YP_002733484.1| leucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|254694452|ref|ZP_05156280.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254708340|ref|ZP_05170168.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254708807|ref|ZP_05170618.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256030333|ref|ZP_05443947.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256045403|ref|ZP_05448297.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256114371|ref|ZP_05455104.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256160504|ref|ZP_05458193.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255710|ref|ZP_05461246.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256263261|ref|ZP_05465793.1| leucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|256370211|ref|YP_003107722.1| leucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168007|ref|ZP_05754818.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260565705|ref|ZP_05836188.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|261214766|ref|ZP_05929047.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261222921|ref|ZP_05937202.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261315840|ref|ZP_05955037.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316300|ref|ZP_05955497.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261757452|ref|ZP_06001161.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265987367|ref|ZP_06099924.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991832|ref|ZP_06104389.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995671|ref|ZP_06108228.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265998880|ref|ZP_06111437.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294851046|ref|ZP_06791722.1| leucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|32171576|sp|Q8YJ44|SYL_BRUME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189082986|sp|A9WWT1|SYL_BRUSI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083245|sp|A5VSE9|SYL_BRUO2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782488|sp|C0RF58|SYL_BRUMB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17982131|gb|AAL51424.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|163676107|gb|ABY40217.1| leucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225616207|gb|EEH13255.1| leucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225641616|gb|ACO01530.1| leucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256000374|gb|ACU48773.1| leucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260151078|gb|EEW86173.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260916373|gb|EEX83234.1| leucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260921505|gb|EEX88158.1| leucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261295523|gb|EEX99019.1| leucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261304866|gb|EEY08363.1| leucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737436|gb|EEY25432.1| leucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262553569|gb|EEZ09338.1| leucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|262766955|gb|EEZ12573.1| leucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263002788|gb|EEZ15191.1| leucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093225|gb|EEZ17322.1| leucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659564|gb|EEZ29825.1| leucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294821689|gb|EFG38685.1| leucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|326409810|gb|ADZ66875.1| leucyl-tRNA synthetase [Brucella melitensis M28]
 gi|326539528|gb|ADZ87743.1| leucyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|325295230|ref|YP_004281744.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065678|gb|ADY73685.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 912

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+ + H+GH     I DV+ARF ++ G +V+   G D  G     A
Sbjct: 27  TGKEKYYVLEMFPYPSGRIHMGHVRNYSIGDVIARFKKMFGYNVIHPMGWDSFGLPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  +GV  + +   N    ++    L  SYD    + T    ++   + ++ K+ +KG  
Sbjct: 87  AIKSGVHPREWTLSNIEYMKNELKKLGFSYDWEREVTTCMPDYYKWNQWIFLKMLEKGIA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   S  +    +    +++V    +        + V+  E + +F +++ Y ++LL  
Sbjct: 147 YRAKASVNWCPSCQTVLANEQV---DEEGRCWRCGSLVEQKEIDSWFLKITDYAEELLQD 203

Query: 180 YESHP-EFILPIERRNEVISFVKSG 203
            E     +  P+    +       G
Sbjct: 204 LELLKGHWPDPVITMQKNWIGKSIG 228



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 88/195 (45%), Gaps = 26/195 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  NV+DP E+IE+ G DA R +++       +  +  +G++         G   
Sbjct: 672 SKMSKSKLNVVDPDEMIEKYGADATRLYVLFAAPPESEFEWKTEGIE---------GAYR 722

Query: 361 LVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            + R    ++++ D       G  +++ + +     + LQ++ E + +    + A+A ++
Sbjct: 723 FLRRVFQFVVENKDFFNQGLKGEVSKAGKELRRKVHQTLQKVTEELQERFKFNTAIASIM 782

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E+ R+          K++ D+      V  E I +L I+L  F P ++ ++++I  
Sbjct: 783 ELFNEITRF--------KVKSDGDK-----EVLKEAIEKLIIMLSPFTPHISEEMWEITG 829

Query: 479 VADE--NRCFQSLDQ 491
                    +  +D+
Sbjct: 830 HKTLLIEESWPEVDE 844


>gi|89899568|ref|YP_522039.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123091480|sp|Q220P5|SYL_RHOFD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89344305|gb|ABD68508.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 892

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 94/236 (39%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     A
Sbjct: 30  SSKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    +     +   I +   + T +  ++   + L+ K+ DKG  
Sbjct: 90  ALKNGVPPAQWTFENIAYMKQQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLDKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y ++LL  
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVIDGKG----WRTGATVEKREIPGYYLKITDYAEELLGQ 205

Query: 180 YESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            ++  P +   ++   E       G++           G  I D   Y+     D 
Sbjct: 206 VQTGLPGWPERVKLMQENWIGKSEGVRFAFTHDIRDASGALIDDGRMYVFTTRPDT 261



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/368 (13%), Positives = 126/368 (34%), Gaps = 43/368 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + E ++    V     G     + + +    +  ++F          +      
Sbjct: 475 SGNPLHKHEGFHAG--VVCPICGVAARRETDTMDTFVDSSWYFMRYCDPKNEKAMVGEGA 532

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTG 243
            + +P++   + I  ++  +  L  +R    +  K+  D   + +      L        
Sbjct: 533 AYWMPMD---QYIGGIEHAILHLLYAR----FWTKVMRDLGLVKVDEPFTKLLTQGMVLN 585

Query: 244 YLDNPDGS---KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL-PKKVFSHGFILHK 299
           ++ +  G    K  FWP D+  +  +            +++A L +    + +   + ++
Sbjct: 586 HIYSRKGENGAKDYFWPNDVENVSDE---------TGKVVAAKLKVAVGNLPAGTLVDYE 636

Query: 300 GE-KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           G   +SKS  N +DP ++IE  G D  R + +          ++   ++          +
Sbjct: 637 GIGTMSKSKNNGVDPQDLIERYGADTARLYTMFTAPPEATLEWNDAAVEGSYR--FLRRV 694

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESD-----ESILSVCSRVLQEIRENMQNQLIHRA 413
            N   +  ++ +   D       A  + +     + +      VL+++  + Q    +  
Sbjct: 695 WNFGIKLSTIDMIAVDESTTGATALNDINFSKEAKVLRLEIHTVLKQVDYDYQRMQYNTV 754

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++  + +++ ++ +         K T+   A       +E    L   L    P +A+ +
Sbjct: 755 VSGAMKMINALENF---------KATDSGGAQVA---LIEGFGILLRCLYPATPHIAHSL 802

Query: 474 FDILFVAD 481
           +  L  A 
Sbjct: 803 WQGLGYAG 810


>gi|299529413|ref|ZP_07042851.1| leucyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722662|gb|EFI63581.1| leucyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 902

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 6/219 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA
Sbjct: 31  SKPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNKVPPAKWTYENIAYMKKQMQAMGLAIDWSREVATCDPEYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+  ++ Y  +LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLGITNYAQELLDHV 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +   E        ++V    ++ +   +  R  F   +K
Sbjct: 207 QVGNEKATLNGWPDKVRLMQENWIGKSAGVRFAFTHDVK 245



 Score = 77.1 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 114/345 (33%), Gaps = 28/345 (8%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++        ++  + +         +     G++ 
Sbjct: 494 GVVCPCCGKPARRETDTMDTFVDSSWYFMRYCDAKNGEQMVADGADYWMPMDQYIGGVEH 553

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +   +K     FWP D+  
Sbjct: 554 AILHLLYARFWTKVMRDLGLVKIDEPFTKLLTQGMVLNHIYSRRTAKGAKEYFWPKDVEH 613

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVG 321
           +  D  +         + SA+  LP        I ++G   +SKS  N +DP ++IE+ G
Sbjct: 614 VFDDSGKIIGAKLKIEVDSADGLLP----VGTAIDYEGVGTMSKSKNNGVDPQDLIEKYG 669

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-----YDGM 376
            D  R + +          ++   ++          + N  S+   M +           
Sbjct: 670 ADTARLYTMFTSPPELTLEWNDAAVEGSYR--FLRRVYNFGSKLTGMDMASAVQGVAGAK 727

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                 F ++ +++      VL+++  +      +  ++  + +++ +          E 
Sbjct: 728 SLDDVEFGKAAKALRLEIHNVLKQVEYDYSRMQYNTVVSGAMKMINAL----------ED 777

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K   D  + V    +E    L  +L    P LA+ ++  L  A+
Sbjct: 778 FKALDDAGAKV--ALIEGFGILLRVLYPATPHLAHVLWSELGYAN 820


>gi|23502660|ref|NP_698787.1| leucyl-tRNA synthetase [Brucella suis 1330]
 gi|32171564|sp|Q8FYQ7|SYL_BRUSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|23348668|gb|AAN30702.1| leucyl-tRNA synthetase [Brucella suis 1330]
          Length = 877

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADIARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|237736331|ref|ZP_04566812.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421679|gb|EEO36726.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 869

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+   + YP+ + H+GHA    I DV+AR+ R+ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLVMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYNVLNPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    V+   N  N R    +L  SY  D  I +    ++   + ++K++ +KG 
Sbjct: 89  AAIQNGAHPAVWTKSNIENMRRQLKLLGFSYDWDREIASYTPEYYKWNQWMFKRLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +         +++V    DG+ +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCNTVLANEQV---EDGKCWRHSKTSVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 89/197 (45%), Gaps = 15/197 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I + G D  R F++      K+  ++++GL        A     
Sbjct: 620 EKMSKSKNNGVDPEEMITKYGADTTRLFIMFAAPPEKELEWNENGLAG------AYRFLT 673

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
            + R V    ++ +         +  D+++L   ++ ++++ E+++ +   + ++A  + 
Sbjct: 674 KIWRLVMEHKENLEFGEIDLTKVSRDDKALLIKLNQTIKKVTESIEDDYHFNTSIAATME 733

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++E        K   L+       S    +  EVI+ + ++L  F P   +++++ +  
Sbjct: 734 LINET----QDYKVNILEGGKT--TSESKKIFAEVIKNILVMLSPFTPHFCDELWEEMGN 787

Query: 480 AD--ENRCFQSLDQRLK 494
                N  + S D++L 
Sbjct: 788 TGYLFNEKWPSYDEKLT 804


>gi|261345125|ref|ZP_05972769.1| valine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566813|gb|EFB72348.1| valine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 964

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 138/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 387 IEPMLTDQWYVRTAPLAKDAIKAVEDGRIQFVPRQYENMYFSWMRD-IQDWCISRQ-LWW 444

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 445 GHRIPAWYDEKGNVYVGRDEDEVRRENNLSADVALRQDDDVLDTWFSSGLWTFSTLGWPD 504

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 505 NTEALKTFH-PTDVLVSGFDIIFFWIARMIMMTMHFIKDENGEPQVPFKTVYMTGLIRDE 563

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 564 EGQKMSKSKGNVIDPLDMIDGISLEALLEKRTGNMMQPQLAEKIAKRTRKEYPDGIEAHG 623

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  +  D       
Sbjct: 624 TDALRFTLAALASTGRDINWDMKRL--SGYRNFCNKLWN-ASRFVLMNTEGQDCGQNGGE 680

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
            +F+ +D  I++  +  ++  RE + +     A   +         D Y +  KP  + K
Sbjct: 681 MSFSLADRWIMAQFNHTVKVYREALDSHRYDIAAGILYDFTWNEFCDWYLELSKP-AVHK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            N  +     +  +EV+  L  L    +P +   I+  + V
Sbjct: 740 GNEAQVRAARFTLIEVLEGLLRLAHPIIPFITETIWQRVKV 780



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   +           H+GHA++  I D + R+ R+ G + L+ TGTD  G      
Sbjct: 43  TSKESFCVVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQTGTDHAGIATQMV 102

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + D +D   + F  T ++
Sbjct: 103 VERKIAAEEGKNRHDYGRDAFIDKIWEWKAESGGTISQQMRRLGDSVDWERERF--TMDE 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 161 GLSKAVKEAFVRMYKENLIYRGKRLVNWDPKLHTAISDLEVENREVKGSMWHLRYPL 217


>gi|182681844|ref|YP_001830004.1| leucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130165|sp|Q87C65|SYL_XYLFT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238691042|sp|B2I5T5|SYL_XYLF2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|182631954|gb|ACB92730.1| leucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578093|gb|ADN62062.1| leucyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 879

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 6/213 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 33  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  
Sbjct: 93  AIKNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 153 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  ++  P++           GL+     R 
Sbjct: 209 LNTLDDWPEPVKTMQRNWIGRSEGLEIRFEVRD 241



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 67/508 (13%), Positives = 142/508 (27%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 342 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 398

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +G             R +   N      G   Q Y     PV +    G
Sbjct: 399 INSAEFDGLDYQGAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 458

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 459 AVPVPENQLPVILPENVAFSGTGSPIKTDPEWRKT------------TCPECGGPAERET 506

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T         K   +  P D ++ G +    H +Y+  +    
Sbjct: 507 D-TFDTFMESSWYYARYTSPNAREMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 565

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 566 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 625

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 626 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNETGVE--- 682

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   ++I       +  + ++   
Sbjct: 683 ------GMARFLRRLWTQVHHHASHGPATALDITALDTAQKAIRCKTHNTIARVEDDYGR 736

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 737 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 783

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 784 PHTSHALWQTLGHPETLLEDLPFPKVDT 811


>gi|183598114|ref|ZP_02959607.1| hypothetical protein PROSTU_01478 [Providencia stuartii ATCC 25827]
 gi|188020272|gb|EDU58312.1| hypothetical protein PROSTU_01478 [Providencia stuartii ATCC 25827]
          Length = 860

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  + + YP+ + H+GH     + DV++R+ RL G +VL   G D  G     AA
Sbjct: 31  SKEKYYCLSMLPYPSGRLHMGHVRNYTMGDVISRYQRLLGKNVLQPIGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +    +L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNKTAPAPWTYANIDYMKGQLKMLGFGYDWDREVTTCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G           PV+  E   +F +++ Y ++LL+  
Sbjct: 151 KKTSAVNWCPHDLTVLANEQVIDG----CCWRCDTPVERKEIPQWFIKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DKLDDWPEQVKTMQRNWIGRSEG 229



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 76/195 (38%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++          + +  ++       AN    
Sbjct: 618 SKMSKSKNNGIDPQLMVEKYGADTVRLFMMFAAPPELTLEWQESSVEG------ANRFVR 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVIS 419
            V R V    +            T   + +     + + ++ ++       + A+A ++ 
Sbjct: 672 RVWRIVHEHSQKGATQPLDVSTLTTEQKDLRRDLHKTIAKVTDDFDRRYAFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++++      + P   ++T  DRA     +  E +  + ++L   +P    +++  L  
Sbjct: 732 FMNKL-----VRAP---QETEQDRA-----LMQESLEAITLMLSPIIPHACFEMWKALGH 778

Query: 480 ADENR--CFQSLDQR 492
            D+     +   D++
Sbjct: 779 TDDVDFASWPVADEK 793


>gi|53804495|ref|YP_113910.1| leucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|60390675|sp|Q608N7|SYL_METCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53758256|gb|AAU92547.1| leucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 887

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  SGREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GVT   + D N+   R     L   + +D  I T +  ++   + L+ ++ +KG I
Sbjct: 90  AMQNGVTPAAWTDANADYMRKQLKSLGLAVDWDREIATCKPEYYRWEQWLFTRLFEKGLI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V  G            V+  +   YF R++AY ++LL+ 
Sbjct: 150 YKKTAPVNWDPVDQTVLANEQVIDG----RGWRSGALVEKRDIPMYFMRITAYAEELLAE 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++           G
Sbjct: 206 LDDLPGWPEQVKTMQRNWIGKSHG 229



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 98/354 (27%), Gaps = 72/354 (20%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLH 261
                S      G     +    M  ++++   Y   T   +           + P D +
Sbjct: 474 MPEWYSTTCPKCGGAAERETD-TMDTFVESSWYYARYTCPDNTEAMLDRRADYWLPVDQY 532

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------- 300
           V G +    H +Y   F         +  + P         V +  F   +G        
Sbjct: 533 VGGIEHAILHLLYARFFHKLMRDAGLVHCDEPFTNLLTQGMVVAPTFYREEGGKKHYFGP 592

Query: 301 ------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                         EK+SKS  N +DP  +I+  G D +R F +
Sbjct: 593 TEVELSTDERGRPLGATLKSDGAPVTVGHIEKMSKSKNNGVDPEALIDRYGADTVRLFTM 652

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-----MIPTPGAFTE 385
                 +   +   G++          +    + SV+     Y                 
Sbjct: 653 FAAPPDQSLEWSDSGVEGAFR--FLKRLWTRAAFSVNTAFSQYGRDELRVTDWALVPLAP 710

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE---LKKTNPD 442
           + +    +    L++   +      +  ++  + +   ++   D +  W    L + +  
Sbjct: 711 NHKEARRMIHATLKQANFDFVRHQFNTVVSAAMKI---LNTLADDKGFWNCDHLPEGDEK 767

Query: 443 RA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQR 492
            A   +   V  E    L  LL    P + + ++  L       +  +  +D+ 
Sbjct: 768 DAFRRSAAVVAFEGYSLLTRLLYPIAPHICDALWRQLMPGTDILDAGWPEVDEA 821


>gi|148560314|ref|YP_001259646.1| leucyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371571|gb|ABQ61550.1| leucyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 894

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 49  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 109 MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 169 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 224

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 225 DTLDQWPEKVRLMQRNWIGKSEGLQVR 251



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 451 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 509

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 510 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 557

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 558 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 617

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 618 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 677

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 678 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 730

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 731 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 783

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 784 TEMLVLMTAPMMPHLAEQCLAELG 807


>gi|28199117|ref|NP_779431.1| leucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28057215|gb|AAO29080.1| leucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 887

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 6/213 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 41  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  
Sbjct: 101 AIKNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLA 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 161 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 216

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  ++  P++           GL+     R 
Sbjct: 217 LNTLDDWPEPVKTMQRNWIGRSEGLEIRFEVRD 249



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 67/508 (13%), Positives = 142/508 (27%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 350 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 406

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +G             R +   N      G   Q Y     PV +    G
Sbjct: 407 INSAEFDGLDYQGAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 466

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 467 AVPVPENQLPVILPENVAFSGTGSPIKTDPEWRKT------------TCPECGGPAERET 514

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T         K   +  P D ++ G +    H +Y+  +    
Sbjct: 515 D-TFDTFMESSWYYARYTSPNAREMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 573

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 574 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 633

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 634 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNETGVE--- 690

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   ++I       +  + ++   
Sbjct: 691 ------GMARFLRRLWTQVHHHASHGPATALDITALDTAQKAIRCKTHNTIARVEDDYGR 744

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 745 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 791

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 792 PHTSHALWQTLGHPETLLEDLPFPKVDT 819


>gi|182624360|ref|ZP_02952145.1| isoleucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910578|gb|EDT72951.1| isoleucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 1039

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 134/434 (30%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L  ++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDSFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|168217660|ref|ZP_02643285.1| isoleucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380298|gb|EDT77777.1| isoleucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 1039

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 134/434 (30%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L  ++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDSFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|168209781|ref|ZP_02635406.1| isoleucyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|170712077|gb|EDT24259.1| isoleucyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 1039

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 134/434 (30%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L  ++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDSFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|168205803|ref|ZP_02631808.1| isoleucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662701|gb|EDT15384.1| isoleucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 1039

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 134/434 (30%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L  ++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDSFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|110800157|ref|YP_697229.1| isoleucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110674804|gb|ABG83791.1| isoleucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 1039

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 134/434 (30%), Gaps = 14/434 (3%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +  +   D     +  +     T     +  C      +       +  +    +L
Sbjct: 360 KFVKKCDQQIVDYLKEQNKLFKAEKHTHS---YPHCWRCDTPLL--YYPKESWFVAMTTL 414

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           RD+   N++++    D          ++ + + G            +   E      +  
Sbjct: 415 RDKLLANNEKINWYPDNIKNGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHRECIGS 474

Query: 191 ERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYL 245
               +          +L               +        ++  W D+ +       Y 
Sbjct: 475 IEELKTKGINVPEDIELHKPYIDKVHLNCPHCNKEMKRTAEVIDCWFDSGSMPFAQHHYP 534

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PA       D     F+ +   +  +    P    +     +  KG K+
Sbjct: 535 FENKELFEANYPAQFISEAVDQTRGWFYTLLAISTAIFDRNPFENCIVLGHVLDKKGLKM 594

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV+DP EV++  G DA R+      A      +  + + +     L+        
Sbjct: 595 SKSKGNVVDPFEVLDSQGADATRWHFYTASAPWLPTRFSIEDVAETQRKFLSTLWNVYSF 654

Query: 364 RSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +   L  ++ +           D+ I+S  + +++++ +++ N  I +A  ++     
Sbjct: 655 YVLYAELDSFNPLDYKDFVSDNVMDKWIMSKLNTLVKDVDDHLNNYRITQAALEIEEFTD 714

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E+ + Y    +     +   D           V+  L  +   FVP +  +I+  L V  
Sbjct: 715 ELSNWYVRRNRARYWSEELTDDKIGAYTTLYRVLVTLCKVAAPFVPFITEEIYQNLVVNL 774

Query: 482 ENRCFQSLDQRLKP 495
           +    +S+     P
Sbjct: 775 DENALESIHLGAWP 788



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK----------AA 62
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +              
Sbjct: 47  PPTANGKPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 63  QNAGVTTKVFVDQ----------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           Q      + FV +                +         + ++        ++     K+
Sbjct: 107 QIEDYGVEKFVTECKDSVFTYVSMWEKMTEQIGYWVDMENPYVTYHNPYI-ESVWWALKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + DK  +YKG  +  Y  R     +  EV +G  
Sbjct: 166 MWDKKLLYKGYKTMPYCPRCGTSLSSHEVSQGYK 199


>gi|61657367|emb|CAI44284.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 843

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 48  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 108 AIEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 167

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 168 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 223

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 224 LDKLTGWPEHVKTMQRNWIGKSTG 247



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 446 QRYWGAPIPIIYCEKCGVVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKRTKCPICGG 505

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 506 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 556

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 557 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 615

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 616 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FVKRLWNTFYTVLPFVKEENTENLV 673

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 674 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 730

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 731 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 761


>gi|61657385|emb|CAI44301.1| leucyl-tRNA synthetase [Thermotoga petrophila]
          Length = 843

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 48  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 108 AIEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 167

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 168 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 223

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 224 LDKLTGWPEHVKTMQRNWIGKSTG 247



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 446 QRYWGAPIPIIYCEKCGVVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKRTKCPICGG 505

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 506 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 556

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 557 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 615

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 616 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FIKRLWNTFYTVLPFVKEENTENLV 673

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 674 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 730

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 731 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 761


>gi|14285780|sp|Q9PBG8|SYL_XYLFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 879

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 33  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I +     T +  ++   + ++ ++  KG  
Sbjct: 93  AIKNKVAPAQWTYKNIERMRTQLKSLGYAIDWSREFATCQPDYYVHEQHMFTRLMRKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 153 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
             +  ++  P++           GL
Sbjct: 209 LNTLDDWPEPVKTMQRNWIGRSEGL 233



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/508 (12%), Positives = 142/508 (27%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 342 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 398

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +              R +   N      G   Q Y     PV +    G
Sbjct: 399 INSAEFDGLDYQDAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 458

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 459 AVPVPEDQLPVILPENVAFSGTGSPIKTDPEWRKT------------TCPECGGPAERET 506

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T    +    K   +  P D ++ G +    H +Y+  +    
Sbjct: 507 D-TFDTFMESSWYYARYTSPNAHEMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 565

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 566 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 625

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 626 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNEAGVE--- 682

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   +++       +  + ++   
Sbjct: 683 ------GMARFLRRLWTQVHHHAAHGPATALDITALDTAQKAMRCKTHNTIARVEDDYGR 736

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 737 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 783

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 784 PHTSHALWQTLGHPETLLEDLPFPKIDT 811


>gi|300935929|ref|ZP_07150883.1| valyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458897|gb|EFK22390.1| valyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 951

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|254440081|ref|ZP_05053575.1| valyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198255527|gb|EDY79841.1| valyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 1054

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 117/312 (37%), Gaps = 9/312 (2%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           Q ++   ++    F+       +         +   L   +    + +  DP  ++  W 
Sbjct: 569 QAQISKVWQERMNFVPKNFVELDGDPGDWLQNQAWVLRDDSEYDSLPMWRDPD-VLDTWF 627

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +    + T G+ ++ D  K K++P    + G+DIL F    +      +   +P     
Sbjct: 628 SSGLWPIGTLGWPEDTDALK-KYFPTSDLITGQDILFFWVARMMMMQLAVVNQVPFKTIY 686

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                   KG+K+SKS GNVIDP+++I+E G DALR+      + G     D   +    
Sbjct: 687 LHGLVRDAKGKKMSKSTGNVIDPLDIIDEYGADALRFTNAAMASLGGALKLDMQRIAGYR 746

Query: 351 N--ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           N    L N            +       +         ++ I+   ++VL  + + +   
Sbjct: 747 NFGTKLWNACRFAEMNGAFGMYSQCTACVHDVPPTQSVNKWIIGETAKVLVVVNDALNTY 806

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             + A   +   V     D Y +  KP  +  T+ ++  T   V   V+ Q   LL   +
Sbjct: 807 RFNDAADALYKFVWGKVCDWYVELSKPLLMDGTDAEKQET-QQVMNWVLSQCVTLLHPIM 865

Query: 467 PKLANKIFDILF 478
           P +  +++ ++ 
Sbjct: 866 PFITEELWALMG 877



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 32/177 (18%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+HR+ G D L+  GTD  G       +    
Sbjct: 39  CVMIPPPNVTGVLHMGHAFNNTLQDILVRWHRMRGFDTLWQPGTDHAGIATQMVVERQLA 98

Query: 68  TT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTE--------- 99
            T                   +  ++     +    L  S  +D    T           
Sbjct: 99  ETGQPKRIEMGREKFLEKVWDWKAESGGQIINQLKRLGASCDWDREAFTMSGAPGAPASA 158

Query: 100 -KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
               HD    ++ ++ +KG IY+G     +    E   +D EV     DG  ++ ++
Sbjct: 159 QGNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVDGHMWHFKY 215


>gi|152983469|ref|YP_001346507.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166231631|sp|A6V0C2|SYL_PSEA7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150958627|gb|ABR80652.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 873

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +   D L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++ P +   ++           G+
Sbjct: 207 DNLPGWPEQVKTMQRNWIGKSRGM 230



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 74/185 (40%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++          +   G++         G   
Sbjct: 631 EKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVE---------GANR 681

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      + +++ + +       +++  +++ Q+   + A+A 
Sbjct: 682 FLRRVWRLAHAHVSAGLPGALDGASLSDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIAA 741

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++             L+K     A     +  E +  + +LL    P + + +++ 
Sbjct: 742 VMTLMN------------VLEKAPSQDAQD-RALLQEGLETVVLLLAPITPHICHVLWEQ 788

Query: 477 LFVAD 481
           L  A+
Sbjct: 789 LGHAE 793


>gi|218698006|ref|YP_002405673.1| valyl-tRNA synthetase [Escherichia coli 55989]
 gi|218354738|emb|CAV01799.1| valyl-tRNA synthetase [Escherichia coli 55989]
          Length = 951

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYITGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|75388379|sp|Q7X2N3|SYV_SPHEL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|32188220|gb|AAP46185.1| putative valyl-tRNA synthetase [Sphingomonas elodea]
          Length = 811

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/330 (18%), Positives = 124/330 (37%), Gaps = 19/330 (5%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            + +      + + +  +  S   +                  +    ++     G+ + 
Sbjct: 401 PKSWEKTYFNWMENIQPWCVSRQLWWGHRIPAWFDAEGKPYVAETEEEAQAEAGEGVALT 460

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            DP  ++  W  +      T G+ +N D +    +  D+ + G DIL F    W A ++ 
Sbjct: 461 RDPD-VLDTWFSSALWPFATLGWPENSDPTLGGRYSNDVLISGFDILFF----WDARMMM 515

Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             L   K+V      LH       G+K+SKS GN +DP+ +I++ G DALR+F+    + 
Sbjct: 516 QGLHFMKEVPFKTLYLHGLVRAADGQKMSKSKGNTVDPLGMIDKYGADALRFFMAAMESQ 575

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D   D+  L+     + A  + N  +R            +  P A    +  I++   
Sbjct: 576 GRDIKMDEKRLEG--YRNFATKLWN-AARFCQANGIAASKSLEAPTAELAVNRWIIAETI 632

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN--PDRASTVLYVT 451
             +  +   + +     A   +   V     D Y +  KP  L+       +A     V 
Sbjct: 633 ATVXALDLALADLRFDEAANCIYQFVWSRFCDWYLELIKP-VLQGEGVAAAQAEETRAVA 691

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              + Q+ ++L  F+P +  +++  +   +
Sbjct: 692 GWALDQILVMLHPFMPFITEELWSKMGPRE 721



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           HIGHA +  + D+L R  RL G D  +  GTD  G       + 
Sbjct: 35  EPWTIVNPPPNVTGSLHIGHALDNTLQDILVRHARLKGKDARWVVGTDHAGIATQMVVER 94

Query: 65  AGVTT--------------KVFVD------QNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+        Q +R  R +   +D + + F  T ++    
Sbjct: 95  QLNAAGSKRTDFTREAFVDKVWEWKAESGGQITRQLRRLGCSMDWANERF--TMDEGFSK 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               ++ ++  +G +Y+      +        +D EV        +     P+
Sbjct: 153 AVLKVFVELYRQGLVYRDKRLVNWDPGLGTAISDLEVETKEVRGNFWHLRYPL 205


>gi|297380329|gb|ADI35216.1| valyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 872

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 133/382 (34%), Gaps = 52/382 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E    +          +    HN V+    + + F         +   +       P  
Sbjct: 330 KENALLEKIEEHTHQVGHCYRCHNVVEPYVSKQW-FVKPEIAQSSIEKIQQGLVRFYPSN 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP---------------------------DDP 224
             N   +     L+   +SR+ F WG +IP                           +  
Sbjct: 389 WINN-YNAWMRELRPWCISRQLF-WGHQIPVFTCENNHQFVSLDTPLNCPTCKSEKLEQD 446

Query: 225 QYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           + ++  W  +     +T G+         +     F+P    + G DIL F    + + +
Sbjct: 447 KDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLKDFYPNTTLITGFDILFFWVARMLFCS 506

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L   LP             KGEK+SKS GNVIDP+E+IE+ G D+LR+ L    A G+
Sbjct: 507 ESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIEKYGADSLRFTLANLCATGR 566

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D       L+   N + AN I N VS  + +  + +          T       S  + V
Sbjct: 567 DIKLSITHLEN--NKNFANKIFNAVSY-LKLKQEAFKDRERLSEYQTPLGRYAKSRLNFV 623

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +E R  + N   + A   +   +     D + +  K   ++    D   +V       +
Sbjct: 624 TKETRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK---VENEAIDELGSV-------L 673

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   LL  F+P ++  ++  L
Sbjct: 674 KEALKLLHPFMPFISESLYHKL 695



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 23/154 (14%)

Query: 1   MKEREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           ++E+ K +             HIGHA  + + D+LAR+ R+DG   L+  G D  G    
Sbjct: 35  IQEKNKRFCLMMPPPNVTGILHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQ 94

Query: 60  KAAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTE 99
              +                        + ++         + +      S   F  T +
Sbjct: 95  NVVEKQLLNQGIKKEDLGREAFVQKVWEWKEKSGGAILEQMKHLGVSAAFSRTRF--TMD 152

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           K      ++ + K  +KG I +  Y   +  +D 
Sbjct: 153 KGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTKDG 186


>gi|312130827|ref|YP_003998167.1| isoleucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907373|gb|ADQ17814.1| Isoleucyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 1147

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 105/268 (39%), Gaps = 11/268 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++      ++ VW D+         Y         K +PAD    G D     F  ++  
Sbjct: 603 QVMYREADLIDVWFDSGAMPYAQWHYPFENQEVFDKAFPADFISEGVDQTRGWFFTLHAI 662

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A +L  ++     V +   +   G K+SK LGN IDP + + + G D  R++++      
Sbjct: 663 AGMLFDSVAFKNVVSTGLVLDKNGNKMSKRLGNGIDPFDTLAKYGADPTRWYMITNAEPW 722

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESILSV 393
            +  ++ DG+++                ++   L +Y           A T+ D  I+S 
Sbjct: 723 DNLRFNLDGVQEVQRKLFGTLTNTYNFFALYANLDNYTIEQFDRVPKEALTQMDRWIVSK 782

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLY 449
              +++E+ E   N    +A   +   V++   + Y   + ++ W+ + T+  RA+    
Sbjct: 783 IYTLVKEVTEEFDNYNPTKAGRLIQDFVNDDLSNWYVRLNRRRFWQGEMTDDKRAA--YQ 840

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A L+    P  A+ ++  L
Sbjct: 841 TLQHALCAVAQLMAPIAPFYADWLYRNL 868



 Score = 57.1 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
                       N  P I H     I D+  R+  L G  V    G D HG  +    + 
Sbjct: 49  PTFTFYEGPPSANGTPGIHHVMARTIKDIFCRYKTLRGYQVNRKAGWDTHGLPVELQVEK 108

Query: 65  AGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK  +                  + +  +RDM D +   +  D+   T E ++ ++
Sbjct: 109 ELGITKEDIGKKISVEEYNRKCREAVMRFTGIWRDMTDKMGYWVDMDNPYITYESKYIES 168

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              L KK+ DKG +YKG     YS       +  E+  
Sbjct: 169 VWNLLKKLHDKGLLYKGYTIQPYSPAAGTGLSSHELNM 206


>gi|283853205|ref|ZP_06370457.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571378|gb|EFC19386.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 837

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+ARF R++G +VL   G D  G     AA
Sbjct: 30  SRPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARFKRMEGNNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  + R     L  SYD    I T    ++   +  + K  +KG +Y
Sbjct: 90  IKHKLHPASWTISNIDSMRTQLKRLGYSYDWRREIATCHPGYYVHEQRFFLKFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G           PV   + E +F R++ Y ++LL+  
Sbjct: 150 RKHSPQNWCETCGTVLANEQVIDG----CCWRCDQPVVQKDLEQWFLRITDYAEELLADL 205



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 105/306 (34%), Gaps = 34/306 (11%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDP----QYIMYVWIDALTN---YLTTTGYLDNPD 249
           ++    G   L  S +  +        P       +  + ++      Y +        +
Sbjct: 465 LAMRPDGRSPLPHSPEFVNATCPTCGGPARRETDTLDTFFESSWYFARYASAREAGRPFN 524

Query: 250 GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKG 300
             +  +W P D ++ G +    H +Y             L+ + P  + + + G ++  G
Sbjct: 525 PDEVGYWLPVDQYIGGIEHAILHLLYSRFFVKALRDCGYLAFDEPF-QNLLTQGMVIKDG 583

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+DP  +I   G D +R F++      KD  +   G++    +   + +  
Sbjct: 584 SKMSKSKGNVVDPDLMIGRYGADTVRVFILFAAPPEKDLEWSDTGIEGA--SRFLSRLWR 641

Query: 361 LVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
           LV+  +  +L       P               +         +   ++ +    + A+A
Sbjct: 642 LVTEELGGLLMPVAACAPAGELGIDGLPPVFAELRRREHATAAKAGADIRERFQFNTAIA 701

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + LV+ +    DA +        P  A  V       +  L  +L    P +  +++ 
Sbjct: 702 AAMELVNFLYANVDALR------AEPKGAKAVSS----AVATLLTVLSPIAPHICEELWQ 751

Query: 476 ILFVAD 481
            +  A 
Sbjct: 752 QIGHAK 757


>gi|254714649|ref|ZP_05176460.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717547|ref|ZP_05179358.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261219381|ref|ZP_05933662.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261322443|ref|ZP_05961640.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260924470|gb|EEX91038.1| leucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261295133|gb|EEX98629.1| leucyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 877

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|255657678|ref|ZP_05403087.1| isoleucine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849865|gb|EEX69872.1| isoleucine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 1043

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 132/402 (32%), Gaps = 13/402 (3%)

Query: 100 KRHHDTCRILWKKISDK-GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                +    W+  +      +   +    S++DE   N+  V             N ++
Sbjct: 387 PEFTHSYPHCWRCDTPLLYYSFPTWFIKMTSVKDELVANNKTVNWIPKSIGEGRFGNWLE 446

Query: 159 WMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
            +++ G      +   L  +Q +    +       L     N              ++ K
Sbjct: 447 HVQDWGLSRNRYWGTPLPVWQCECGHQHVIGSIEELKSMSSNCPDDIELHRPYIDKVTIK 506

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G K     + ++  W D+ +       Y  +      K +PAD      D     F
Sbjct: 507 CPECG-KEMHRVKEVIDCWFDSGSMPFAQWHYPFDNKEIFEKRFPADFISEAVDQTRGWF 565

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + LL    P    +        +G K+SKS GN +DP+E +++ G DA+R++  
Sbjct: 566 YSLIAISTLLFHKAPYRNVIVLGHVQDKEGRKMSKSKGNAVDPMEALQKHGADAIRWYFY 625

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDE 388
              A      +  D +++     +           +   + ++D              D+
Sbjct: 626 ENSAPWLPNRFHDDAVQEGQRKFMGTLWNTYAFFVLYANIDNFDATKYTLDYDKLPVMDK 685

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
             LS  + +++++  ++ N  +  A   +   V E+ + Y    +     K         
Sbjct: 686 WCLSRLNTMVKDVDYDLSNYRVTEAAKALEEFVDELSNWYVRRSRSRFWAKGMEQDKINA 745

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  +   A      +P +   I+  L  + + +  +S+
Sbjct: 746 YMTLYTALVTTAKAAAPMIPFMTESIYRNLVCSIDKKAPESV 787



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D+L RF  + G  VL   G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVLTRVIKDMLPRFASMKGKKVLRKAGWDTHGLPVELEVEKQIGINGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKI 113
                         +  V +    + + +DV+    D      T E    ++     K+I
Sbjct: 107 QIEAYGIEPFIKKCRESVWKYKGMWEEFSDVVGFWADMEHPYITYENDFIESEWWALKEI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             KG +Y+G     Y  R     +  EV +G  
Sbjct: 167 WKKGLLYEGYKVVPYCPRCGTPLSSHEVAQGYK 199


>gi|254719795|ref|ZP_05181606.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984814|ref|ZP_06097549.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|264663406|gb|EEZ33667.1| leucyl-tRNA synthetase [Brucella sp. 83/13]
          Length = 877

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGEARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEVDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  L++ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLIAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|258405548|ref|YP_003198290.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797775|gb|ACV68712.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 831

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 6/252 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     I DV+ARF R+ G +V    G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRVYTIGDVIARFKRMRGYNVFHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    R     L  S  +   + T    ++   ++ + K+ +KG IY
Sbjct: 90  IKHGTHPAKWTYANITEMRQQLQRLGYSLEWQRELATCHPGYYKWEQLFFLKLYEKGLIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V +G          + V+  E   +F R++AY D+LL   
Sbjct: 150 RKKAPVNWCPGCNTVLANEQVEEGM----CWRCDSEVEHKELAQWFVRITAYADELLQDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +             +     KS   ++       +  I++       +Y           
Sbjct: 206 DKLDGTWPERVITMQRNWIGKSYGSEIDFQVDGLEESIRVFTTRPDTLYGATFMSLAPEH 265

Query: 241 TTGYLDNPDGSK 252
                       
Sbjct: 266 PLVETCIARAED 277



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 92/235 (39%), Gaps = 22/235 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKIS 304
             + P D ++ G +    H +Y   F         +  + P  + + + G +L  G K+S
Sbjct: 527 DYWLPVDQYIGGIEHAILHLLYARFFTKALRDLGYMDLDEPF-QHLLTQGMVLKDGAKMS 585

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GN++DP E++E  G D  R F +      +D  ++   ++          +  +   
Sbjct: 586 KSKGNIVDPNEMLETYGADTTRLFTLFAAPPERDLDWNDKAVEGAYR--FLARLWRMGQD 643

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSE 423
               +           G  +E+  ++       +Q++  +M +    + A+A V+ LV+E
Sbjct: 644 LSGTLPTLPACAPLPAGELSETAAALRRKEHLTVQKVSADMEEKFQFNTAIAAVMELVNE 703

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +     A++     +T+     + L  T+ ++           P L  +++  L 
Sbjct: 704 IS---AARESLLASETDRHALGSALATTLTLLA-------PMTPHLCEELWQRLG 748


>gi|121703584|ref|XP_001270056.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119398200|gb|EAW08630.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 994

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 78  DKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMKGHEVLHPMGWDAFGLPAENAA 137

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 138 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLHKKGLAY 197

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++ +++ LL+  
Sbjct: 198 QAEAVVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLNDL 254



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 63/438 (14%), Positives = 125/438 (28%), Gaps = 108/438 (24%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK--------SGL 204
              PV+      +      Y    +          +P+      +   K           
Sbjct: 478 HGEPVEQWRLRDWLISRQRYWGAPIPIIHCKSCGPVPVPDEQLPVQLPKIEGDWLKGKKG 537

Query: 205 KDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPAD 259
             L  S++  +      + P       M  ++D+   YL            S +   P D
Sbjct: 538 NPLESSQEWVNTTCPSCNGPAKRDTDTMDTFVDSSWYYLRFLDSQNKEQPFSPSTIRPVD 597

Query: 260 LHVIGKDILRFHAIY-------------WPAFLLSANLPLPKKVFSHGFI---------- 296
           +++ G +    H +Y             +P    + +LP P + F               
Sbjct: 598 IYIGGVEHAILHLLYARFIYKFLAQSELFPEIARTGDLPGPSEPFRTLMSQGMVHGRTYS 657

Query: 297 ------------------------------LHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
                                             EK+SKS  N +DP     + G DA R
Sbjct: 658 DPSTGRFLLPSEVDLSNPNQPLITGTQVTPNISFEKMSKSKHNGVDPTSCALKYGADATR 717

Query: 327 YFLVREIACGKDGFYDKDGLK--KRVNADLANGI----GNLVSRSVSMILKDYDGMIPTP 380
             ++      +   +D   +   +R    L   +     +L + S ++   D +      
Sbjct: 718 AHVLFSAPVSEVLEWDDSKIVGIERWFGRLWKLVVDAKQSLGASSFTVSQADVEASSGHA 777

Query: 381 GAF-------TESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQ 431
                     ++SD   +    + +  +   ++     ++  ++ +I L +         
Sbjct: 778 TTLPALLQGISDSDADSVLHTHQTVSSVTNCIEKNPYGLNTVISDLIKLTN--------- 828

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSL 489
               L  + P    T   V    +  L  LL    P LA++ +++L      EN   +  
Sbjct: 829 ---TLTSSTP----TSPQVLYLCVSSLIRLLAPVAPALASECWEVLHGPIIRENSSTKPT 881

Query: 490 DQRLKPGFMLHKTFDPIF 507
           D+ + P         PIF
Sbjct: 882 DEAIVP---------PIF 890


>gi|37523650|ref|NP_927027.1| leucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|48428525|sp|Q7NE01|SYL_GLOVI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|35214655|dbj|BAC92022.1| leucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 847

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 88/231 (38%), Gaps = 6/231 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K Y  +   YP+   H+GH     I DV++R+ R+ G +VL   G D  G     
Sbjct: 26  MDGRPKFYALSMFPYPSGALHMGHVRNYSITDVISRYKRMRGFNVLHPIGWDAFGLPAEN 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA + G+    + +QN    R+    L  +Y  +  + T    ++   + L+ +    G 
Sbjct: 86  AAIDRGIHPAQWTEQNIAQMREQLKRLGFAYAWEREVATCSPAYYRWTQKLFLEFWKAGL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V               V+    E ++ +++ Y ++LL 
Sbjct: 146 AYRKAGVVNWDPVDQTVLANEQVDAE---GRSWRSGALVEKRPLEQWYLKITDYAEELLQ 202

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
              +  ++   +    E       G  +L         GI++       +Y
Sbjct: 203 ALGTLGDWPERVRVMQENWIGKSVG-AELCFPINGEPEGIRVFTTRPDTVY 252



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 74/193 (38%), Gaps = 27/193 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP+ V  E G D  R F++ +    K+  +    ++ + +         
Sbjct: 612 EKMSKSKYNGIDPLTVRSEYGADTARLFVLFKAPPEKELEWSDADVRGQYS--------- 662

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R    + +   G  P        +  +     R +Q++  +++    + A+A ++ L
Sbjct: 663 FLGRVWRTVYEFVSGEKPDRPVGEAQERDLRREVHRAIQQVGGDIEQYKFNTAIAALMKL 722

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +  Y   Q P                   E +  +  LL  F P +  +++  L  A
Sbjct: 723 NNAMADYPSGQSP----------------AYKEGVYVIVKLLAPFAPHIGAELWQALGEA 766

Query: 481 DE--NRCFQSLDQ 491
            +     + +LD+
Sbjct: 767 GDIHTSDWPALDE 779


>gi|15838767|ref|NP_299455.1| leucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9107316|gb|AAF84975.1|AE004031_7 leucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 887

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 41  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I +     T +  ++   + ++ ++  KG  
Sbjct: 101 AIKNKVAPAQWTYKNIERMRTQLKSLGYAIDWSREFATCQPDYYVHEQHMFTRLMRKGLA 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 161 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 216

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
             +  ++  P++           GL
Sbjct: 217 LNTLDDWPEPVKTMQRNWIGRSEGL 241



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/508 (12%), Positives = 142/508 (27%), Gaps = 99/508 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 350 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 406

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +              R +   N      G   Q Y     PV +    G
Sbjct: 407 INSAEFDGLDYQDAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 466

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 467 AVPVPEDQLPVILPENVAFSGTGSPIKTDPEWRKT------------TCPECGGPAERET 514

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T    +    K   +  P D ++ G +    H +Y+  +    
Sbjct: 515 D-TFDTFMESSWYYARYTSPNAHEMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 573

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 574 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 633

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 634 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNEAGVE--- 690

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   +++       +  + ++   
Sbjct: 691 ------GMARFLRRLWTQVHHHAAHGPATALDITALDTAQKAMRCKTHNTIARVEDDYGR 744

Query: 408 QL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           +   + A+A V+ L + + R+              D  +    V  E +  + +LL    
Sbjct: 745 RRSFNTAIAAVMELSNTLARF-------------DDTTTQSHAVRQEALETMVLLLNPIT 791

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQ 491
           P  ++ ++  L   +   E+  F  +D 
Sbjct: 792 PHTSHALWQTLGHPETLLEDLPFPKIDT 819


>gi|168821100|ref|ZP_02833100.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205342359|gb|EDZ29123.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320088907|emb|CBY98665.1| Valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 951

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|148977747|ref|ZP_01814303.1| valyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962961|gb|EDK28231.1| valyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 957

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 119/360 (33%), Gaps = 58/360 (16%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRANNNLAPVVVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN----- 283
             W  +      T G+ +  +  K    P+D+ V G DI+ F         +  N     
Sbjct: 474 DTWFSSALWTFGTQGWPEQTEDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFNKDENG 532

Query: 284 ---LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KSQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAK 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           R V M  +++D  +           F+ +D+ I S      +E   ++ N  +  A   +
Sbjct: 650 RYVLMNTEEHDCGMSLSAEDRANMEFSLADKWIESQFELAAKEFNAHLDNYRLDMAANTL 709

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP  L K    +     Y+ + V+ +   L    +P +   I+ 
Sbjct: 710 YEFIWNQFCDWYLELTKP-VLWKGTEAQQQATRYMLITVLEKTLRLAHPVLPYITESIWQ 768



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I         + H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGRLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|308452471|ref|XP_003089058.1| hypothetical protein CRE_18338 [Caenorhabditis remanei]
 gi|308243470|gb|EFO87422.1| hypothetical protein CRE_18338 [Caenorhabditis remanei]
          Length = 698

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 80/525 (15%), Positives = 155/525 (29%), Gaps = 110/525 (20%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GH +   I D L R++R+          ++    +    AQ    
Sbjct: 41  CIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRM----------SERFAARKKLVAQAEAE 90

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
                +                       T +    D   ++ + +       K      
Sbjct: 91  GWLDQIQPY--------------------TLKPPRGDRSGVIIEPLLTDQWYVKIAPLAE 130

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +++     +   V +     Y    +N   W                    +  H    
Sbjct: 131 PAIKAVKDGDIKFVPEQYSNMYMAWMNNIQDWCISRQL--------------WWGHRIPA 176

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
                 N  +   +  +     ++      I++  D   ++  W  +     +T G+  +
Sbjct: 177 WYDAEGNIYVGRSEEEV----RAKNNIAADIELNQDED-VLDTWFSSGLWTFSTLGWTGD 231

Query: 248 PDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
               K  ++     P D+ V G DI+ F         +           +P         
Sbjct: 232 EAKDKENYFLNTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGTPQVPFKTVYVHGL 291

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DP+++I+                                    
Sbjct: 292 VRDGEGQKMSKSKGNVLDPLDLIDGVDLETLVQKRTTGLMNPKDAPKIEKSTRKEFPEGI 351

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G DA+R+        G+D  +D   ++     + AN I N  +R V M  +      
Sbjct: 352 QAYGTDAVRFTFCALANTGRDIKFDMKRVEG--YRNFANKIWN-ATRFVMMNCEQQPIGQ 408

Query: 378 PTPGAFTES-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
                  E  ++ I+S   +    +++      +  A   +   +     D Y +  KP 
Sbjct: 409 EIRQDLWELPEQWIVSRLQKAEAAVQQAFATYRLDLAAQAIYEFIWNEYCDWYVELTKP- 467

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  V + V+     L    +P L  +I+  L
Sbjct: 468 VLNDENVSTERKAEVRRVLLSVMEASLRLAHPIMPFLTEEIWQTL 512


>gi|257470691|ref|ZP_05634781.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064897|ref|ZP_07929382.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690573|gb|EFS27408.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 869

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +E  Y+   + YP+ + H+GHA    I DV++R+ R+ G +VL   G D  G     
Sbjct: 29  VPGKENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYNVLHPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    V+   N  N +    +L  SYD    I +    ++   + ++K++ +KG 
Sbjct: 89  AAIQNGAHPAVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           IYK      +         +++V    DG+ +      V   E E +FF+++ Y D+LL 
Sbjct: 149 IYKKKSLVNWCPDCNTVLANEQV---EDGKCWRHSKTSVIQKELEQWFFKITDYADELLE 205

Query: 179 YY 180
            +
Sbjct: 206 GH 207



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 116/314 (36%), Gaps = 62/314 (19%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDI 267
               G     D    M  ++D  + Y        N +    K     ++P D ++ G + 
Sbjct: 487 CPVCGGPARRDTD-TMDTFVD-SSWYFLRYCDPKNIELPFDKNIVDGWFPVDQYIGGIEH 544

Query: 268 LRFHAIYWPAFL--------LSANLPLPKKVF---------------------------- 291
              H +Y   F         LS+N P  + +                             
Sbjct: 545 AVMHLLYARFFHKVLRDMGLLSSNEPFKRLLTQGMVLGASYYSNNENRFLYAEEVEVKGE 604

Query: 292 ------SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                 +   ++ K EK+SKS  N +DP E++E+ G D  R F++      K+  ++++G
Sbjct: 605 KAYSKKTGEELISKIEKMSKSKNNGVDPEEMVEKYGADTTRLFIMFAAPPEKELEWNENG 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           L        A      + R V    ++ +         +  D++++   ++ ++++ E++
Sbjct: 665 LAG------AYRFLTKIWRLVMEHKENMEFGEINLTVVSREDKALIIKLNQTIKKVTESI 718

Query: 406 QN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +N    + ++A  + L++E        K   ++       S    +  EV+R + ++L  
Sbjct: 719 ENDYHFNTSIAATMELINET----QDFKTNIIEAGKS--TSESKKIFGEVVRNIILMLSP 772

Query: 465 FVPKLANKIFDILF 478
           F P   + +++ + 
Sbjct: 773 FTPHFCDDLWEEMG 786


>gi|149377498|ref|ZP_01895239.1| leucyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149358190|gb|EDM46671.1| leucyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 861

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++    L   YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IANKTAPAKWTHANIAYMKNQLKQLGFGYDWNRELATCKPDYYRWEQWFFARLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  +   +F R++ Y ++LL+  
Sbjct: 151 KKMSTVNWDPIDQTVLANEQVVDG----RGWRSGALVEQKKIPQWFIRITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 207 DELEDWPEQVKTMQRNWIGKSVG 229



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 73/181 (40%), Gaps = 20/181 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I+E G D +R F++      +   +   G++       A+     
Sbjct: 620 KMSKSKNNGIDPQAIIDEHGADTVRLFMMFAAPPEQSLEWSDSGVEG------AHRFLKR 673

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           + R VS   +             E   ++       + ++ +++  +L  + ++A V+ L
Sbjct: 674 LWRMVSEHTESGTVPALDTTDLGEGQRNLRRKTHETIAKVSDDVSRRLTFNTSIAAVMEL 733

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +++V +         L    P   +    V  E +    ++L   VP + ++++  L   
Sbjct: 734 LNDVSK---------LTDDEPQSLA----VRQEALDTAVLVLSPIVPHICHQLWHALGHE 780

Query: 481 D 481
           +
Sbjct: 781 E 781


>gi|320529478|ref|ZP_08030564.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138272|gb|EFW30168.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 849

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 57  KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMAGYNVLHPMGFDSFGMPAENAAI 116

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N +     + +SY  D  + T  + ++   + +++    KG  YK
Sbjct: 117 KNNVHPAAWTYANIENMKRQQRAMGLSYDWDREVVTCREDYYRWTQWIFELFYKKGLAYK 176

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +         +++V  G          + VQ      +FF+++ Y D+LL+  +
Sbjct: 177 KEASVNWCDTCGTVLANEQVEDGK----CWRCKSEVQKRNLAQWFFKITDYADELLADLD 232

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
             P +   ++   E       GL
Sbjct: 233 KLPGWPERVKTMQENWIGRSEGL 255



 Score =  119 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 101/285 (35%), Gaps = 29/285 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           L               D              Y          D     +W P D ++ G 
Sbjct: 505 LHCKCPKCGGDATRETDTMDTFICSSWYYFRYADPHNAERPFDRDAVNYWAPVDQYIGGI 564

Query: 266 DILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y          A +L  + P    + + G ++  G K+SKSLGNV+ P E+I
Sbjct: 565 EHAILHLLYARFFTKVLRDAEMLDFDEPFT-NLLTQGMVIKDGAKMSKSLGNVVSPEEII 623

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +  G D  R F++      +D  +   G++        + +  ++ +    I    D   
Sbjct: 624 DRYGADTARLFILFAAPVERDLDWSDQGVEGAFR--FLSRVWRILGQFEETIRSASDAY- 680

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
               A +  +  +  V    ++++ E++    + + A++ V+ LV+    +         
Sbjct: 681 -DTDALSTEETELRRVLHSTVKKVTEDIRDRFMFNTAISSVMELVNAFYAF--------- 730

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                DRA     +  E    L  +L  F P +  +++  LF+ +
Sbjct: 731 ----QDRALH-PGLAREAASALVRMLAPFAPHITAELWSRLFIGN 770


>gi|238921313|ref|YP_002934828.1| valyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238870882|gb|ACR70593.1| valyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 951

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 138/398 (34%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAAPLAKPAIEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +  +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGRVYVGRSEEEVRSENGLDAGVTLTQDNDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  +    P ++   G DI+ F         +           +P      +      
Sbjct: 492 NTEALRTFH-PTNVLTSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFKTVYITGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMIDGISLPALLEKRTGNMMQPQLAEKIAKRTEKQFPDGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  + +D       
Sbjct: 611 TDALRFTLSALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGHDCGFNDGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  IL+  +R ++ +RE + +     A   +         D Y +  KP  +  
Sbjct: 668 KIYSLADRWILAEFNRTVKAMREALDSYRFDIAANILYEFTWNQFCDWYLELAKP-AING 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSDAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQR 764



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 23/172 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TGKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T + 
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              +  + ++ ++  +  IY+G     +  +     +D EV           
Sbjct: 148 GLSNAVKEVFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRETKGSMWH 199


>gi|300776381|ref|ZP_07086239.1| valine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501891|gb|EFK33031.1| valine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 879

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 131/364 (35%), Gaps = 55/364 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++S      L           P + +N         ++D ++SR+   W
Sbjct: 358 IEPKVSVQWFLKMSEIAKPALDVVMDDEVKFYPEKFKNT-YKHWMENIRDWNISRQ-LWW 415

Query: 217 GIKIP------DDPQYI--------------------------------MYVWIDALTNY 238
           G +IP       D  ++                                +  W  +    
Sbjct: 416 GQQIPAYYYGEGDEDFVVAETKEEALELAKQKTGNSSLTTENLRQDDDALDTWFSSWLWP 475

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    L +P+      ++P    V G DI+ F    +          +P     F+   
Sbjct: 476 MSVFDGLLDPENKDINYYYPTSDLVTGPDIIFFWVARMIMAGLEYRKEVPFKNVYFTGIV 535

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  DP+E++++ G D +R  ++   A G D  +D+D + +  N    
Sbjct: 536 RDKQRRKMSKSLGNSPDPLELMDKYGADGVRVGILLSSAAGNDLLFDEDLMLQGRN---- 591

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                 +  +  +I        P      ++ E   +  ++ + EI +  +   I  AL 
Sbjct: 592 --FMTKIWNAFRLINMWNHEDKPAAATDNQAIEWFENKLNKTIFEINDQFEKFRISDALH 649

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  L+ +     Y +A KP   +  + +    V   T+    +L  LL  F+P L  ++
Sbjct: 650 LIYKLIWDDFCGWYLEAIKPNYGEGISKE----VYNKTIYFFEELMKLLHPFMPFLTEEL 705

Query: 474 FDIL 477
           + ++
Sbjct: 706 WQMI 709



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ++    +           H+GH     + DVL R  R+ G +  +  GTD          
Sbjct: 40  DKPPYTVVIPPPNVTGILHMGHMLNNTLQDVLVRRARMRGFNACWIPGTDHASIATEAKV 99

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  +D    T E +   
Sbjct: 100 VAKLKSEGVNKSDITREEFLTHAWDWTNKYGGTILEQLKKLGCSCDWDRTRFTMEDKLSQ 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                +  + +KG IY+G     +    +   +D+EV               ++  EE
Sbjct: 160 QVIKSFVDLYNKGLIYRGYRMVNWDPEAKTNISDEEVIFKEQNGKLYFLKYKIEGSEE 217


>gi|205355207|ref|YP_002229008.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207859601|ref|YP_002246252.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|205274988|emb|CAR40062.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|206711404|emb|CAR35783.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|326630365|gb|EGE36708.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 951

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADIQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|307544817|ref|YP_003897296.1| leucyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216841|emb|CBV42111.1| leucyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 860

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +REK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     A
Sbjct: 30  TDREKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYQRMQGKNVMQPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  QN    R     L  +YD      T +  ++   +  + K+ +KG +
Sbjct: 90  AIQNQVPPARWTQQNIETMRAQLKSLGFAYDWSREFATCDSDYYRWEQWFFTKLVEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V +G            V+  E   +F +++ Y ++LL+ 
Sbjct: 150 YKKMSMVNWDPVDQTVLANEQVIEG----RGWRSGALVERKEIPLWFLKITDYAEELLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +           +   I   +
Sbjct: 206 LDRIDWPEQVKTMQRNWIGKSR 227



 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 126/351 (35%), Gaps = 44/351 (12%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-RRNEVISFVKSGLK 205
           G  +  + +      E  ++F      D   +  +   ++ LP++     +   +   L 
Sbjct: 480 GDGWTRETDTFDTFMESSWYFARFCCADNHTAMLDDRADYWLPVDLYIGGIEHAILHLLY 539

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
               ++   D+G+   D+P   +          +  T Y    +G K  F PAD+ V   
Sbjct: 540 ARFFTKLMRDFGLVKADEPFQRLLTQGMV----IAETYYRPTANGGKQWFNPADVEVSRD 595

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG--EKISKSLGNVIDPIEVIEEVGVD 323
           D                  P+   + + G  +  G  EK+SKS  N +DP  +I+  G D
Sbjct: 596 D---------------KGRPVSATLVADGQPVEMGGIEKMSKSKNNGVDPQAMIDRFGAD 640

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            +R F++      +   +   G++       A+     + R V+  L+          + 
Sbjct: 641 TVRLFMMFAAPPEQSLEWSDSGVEG------AHRFLKRLWRLVAEHLEAGTPATLDTESL 694

Query: 384 TESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
            ++   +       +Q+  +++  +   + A+A V+ L + + + FD   P  L      
Sbjct: 695 DDAQRELRRKTHETIQKASDDIGRRTTFNTAIAAVMELTNALGK-FDDTSPLGLA----- 748

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQ 491
                  V  E +    +LL    P + + ++  L   +      + +LD+
Sbjct: 749 -------VAREAVEACVLLLAPITPHVCHTLWAELGHDEPAIDARWPALDE 792


>gi|254172065|ref|ZP_04878741.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033961|gb|EEB74787.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 1066

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 17/298 (5%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDN 247
            NE +  ++  L    L R   D + IK+          ++ VW D+      +  Y  N
Sbjct: 510 YNEKLRVIEEKLGPEDLHRPYVDAFIIKVNGKEMKRVRDVVDVWFDSGIASWASLDYPRN 569

Query: 248 PDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +    K WPAD  V G+D +   F++    + +    +P          +  KG+K+SK
Sbjct: 570 KE-LFEKLWPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSK 628

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN+I P EV+++ G D  R++++      ++  +   GL++ V   L       V  +
Sbjct: 629 SLGNIIRPEEVVQKEGRDPFRFYMLWATNPWENLRFSWKGLEQ-VKRMLNILWNVYVLSA 687

Query: 366 VSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
             M L ++D     P      E D  ILS  + +++++ E ++   + +A   + + V  
Sbjct: 688 TYMSLDNFDPTKLKPEELPFREEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYNFVVE 747

Query: 422 SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                Y     ++ W  +  +PD+ ++  Y   +V   L  L+  F P +A +I+  +
Sbjct: 748 DLSRWYVRLIRKRMWV-EGDDPDKLAS-YYTVWKVFDVLLRLMAPFTPYIAEEIYQNM 803



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I    + 
Sbjct: 40  PKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQ 99

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           A                      K F   N +   +   +L I   +D+   T +  + +
Sbjct: 100 ALGLKTKKDIETEIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDNPYMTIKNEYIE 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQWMEE 162
           +     KK  +KG + K      +  R E    + EV      +   + +   PV+  E 
Sbjct: 160 SGWFTLKKAWEKGLLEKDKRVLHWCPRCETALAEHEVRGEYKVRKDPSIYVKFPVEGKEN 219

Query: 163 E 163
           E
Sbjct: 220 E 220


>gi|27262522|gb|AAN87542.1| Leucyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 775

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+ARF  ++G +VL   G D  G     AA
Sbjct: 40  DKPKYYCLEMFPYPSGNLHMGHVRVYSIGDVIARFKTMEGFNVLHPMGWDAFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  N R     + ISY  D  + T    ++   + L+ ++   G  Y
Sbjct: 100 IKHNVPPSDWTWSNIANMRRQLQTMGISYDWDREVATCHPDYYKWTQWLFLQLYKAGLAY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V  G          + V+      +FFR++ Y  +LL   
Sbjct: 160 KKKAHVNWCPSCATVLANEQVVDG----LCERCDSQVEKKALAQWFFRITDYAQRLLDDL 215

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
              P +   ++   E       G
Sbjct: 216 NKLPGWPDKVKTMQENWIGRSEG 238



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 100/277 (36%), Gaps = 37/277 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y +            A +W   D ++ G +    H +Y   F   
Sbjct: 508 DTMDTFVCSSWYFLRYCSPKDSEFAVRKEDADYWMNVDQYIGGVEHAILHLMYARFFTKV 567

Query: 279 ----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                + +     + + + G +L  G K+SKS GN + P E+I + G D  R F++    
Sbjct: 568 LYDLKIVSVEEPFENLLTQGMVLMGGSKMSKSKGNTVSPEEIIAKYGADTARLFILFAAP 627

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI---------PTPGAFTE 385
             +D  +   G++         G    + R   ++    D            P     + 
Sbjct: 628 PERDLEWSDRGVE---------GAHRFLHRVWRLVQTYGDQFDNVPNLIIDSPDLQGLSG 678

Query: 386 SDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            D  ++ +    ++++ E++ Q    + A++ ++ +V+ + +Y          K      
Sbjct: 679 DDRELVRISHYSVKKVGEDIGQRFNFNTAVSTIMEMVNALYQY----------KDKVSLD 728

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              L +  + + +L ++L  F P +  +++  L  +D
Sbjct: 729 QQNLPLVKDALARLVLILAPFAPHICEELWQELGGSD 765


>gi|222112431|ref|YP_002554695.1| leucyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782496|sp|B9MH67|SYL_DIAST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221731875|gb|ACM34695.1| leucyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 910

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     A
Sbjct: 30  QAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   + T +  ++   + L+ K+ DKG  
Sbjct: 90  ALKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSREVATCDPDYYKWNQWLFLKMLDKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y  +LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLKITDYAQELLDH 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   E        ++V    ++ +   +  R  F   I+
Sbjct: 206 VQIGNEKATLTGWPDKVRLMQENWIGKSAGVRFAFPHDIR 245



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 125/392 (31%), Gaps = 41/392 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+   D    G   +      +           +     +D +++    + 
Sbjct: 480 SGNPLAKCEAFLKVDCPCCGKPARRETDTMDTFVDSSWYFMRYCDPKNRDAMVAGGTDYW 539

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTG 243
                       +     G++   L      +  K+  D   + +      L        
Sbjct: 540 MRDQKAATGGSGMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKVDEPFTKLLTQGMVLN 599

Query: 244 YLDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----VFSHGF 295
           ++ +   +K     FWP D+          H       ++ A L  P +     +     
Sbjct: 600 HIYSRRTAKGAKDYFWPHDVE---------HVYDEAGKIVGAKLKNPAESGDGLLPVGTP 650

Query: 296 ILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           I ++G   +SKS  N +DP ++IE+ G D  R + +          ++   ++       
Sbjct: 651 IDYEGVGTMSKSKNNGVDPQQLIEKYGADTARLYTMFTAPPELTLEWNDAAVEGSYR--F 708

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQ 408
              + N   + +S I KD                F +  +++      VL+++  + Q  
Sbjct: 709 LRRVWNFGVK-LSAIDKDAALASVAGAASLKDVQFGKEAKALRLEIHTVLKQVDYDYQRM 767

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  ++  + +++      +  K      T+   A       +E    L  +L    P 
Sbjct: 768 QYNTVVSGAMKMINA----LEDFK-----ATDSAGAQVA---LIEGFGILLRVLYPATPH 815

Query: 469 LANKIFDILFVADE-NRCFQSLDQRLKPGFML 499
           +A+ ++D L  A        +   ++ P  ++
Sbjct: 816 IAHVLWDELGYAGTLGDLLDAAWPQVAPDALV 847


>gi|145300684|ref|YP_001143525.1| valine tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853456|gb|ABO91777.1| valine tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 954

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 75/402 (18%), Positives = 137/402 (34%), Gaps = 89/402 (22%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R++      +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVRVAPMAKTAIEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCVSRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDDAGNVYVGRDEAEVRAKHSIPSVTTLRQDEDVLDTWFSSALWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +N +  K    P D+ + G DI+ F         +           +P      +     
Sbjct: 491 NNTEALKTFH-PTDVLMSGFDIIFFWIARMIMMTMHFIKDENGQPQVPFKTVYITGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DP+++I+ +                                     
Sbjct: 550 EEGQKMSKSKGNVLDPLDMIDGISLEDLMEKRTGNMMQPQMAEKIGKRTAKQFPEGIEAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L    N    N + N  SR V M  +D D    + 
Sbjct: 610 GTDALRFTLAALASTGRDINWDMKRLDGYNN--FCNKLWN-ASRYVLMNTEDQDCGFSSQ 666

Query: 381 GA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
           G      F+ +D  I S     +++ R  +       A   +   +     D Y +  KP
Sbjct: 667 GNGGEMQFSLADRWIQSQLQVAIRDFRTALDTYRFDIAAGVLYEFIWNQFCDWYLELTKP 726

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L K +        +  V V+  L  L    +P +   I+ 
Sbjct: 727 -VLGKGSEAEQRATRHTLVTVLETLLRLAHPIIPFITETIWK 767



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  + D L R++R+ G + L+  GTD  G      
Sbjct: 30  TSKDSFCIMIPPPNVTGSLHMGHAFQQTLMDTLIRYNRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + D +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKEESGGTITRQMRRLGDSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 + ++ ++ + G +Y+G     +  +     +D EV       +      P+
Sbjct: 148 GLSSAVQEVFVRLYEDGLMYRGKRLVNWDPKLNTAISDLEVENREIKGHMWHLRYPL 204


>gi|330962167|gb|EGH62427.1| valyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 948

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 125/402 (31%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPDVTLQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVQKRTSGLMQPQLAKKIEKQTRQEFAEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIP 378
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
            P   + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EPVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|323163903|gb|EFZ49712.1| leucyl-tRNA synthetase domain protein [Shigella sonnei 53G]
          Length = 390

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 38  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 97

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 98  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 157

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 158 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 214 LDKLDHWPDTVKTMQRNWIGRSEG 237


>gi|289423990|ref|ZP_06425779.1| leucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155565|gb|EFD04241.1| leucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 806

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     AA
Sbjct: 31  SKPKYYCLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +D   +L +SY  D  + T+   ++   + ++ K  +    Y
Sbjct: 91  IKHGVHPHKWTMANIEEMKDQLSMLGLSYDWDKEVATSTPEYYKWTQKIFLKFLENDLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    E    +++V  G            V+  E E ++F+ + + ++LL+  
Sbjct: 151 KKKSFVNWCPSCETVLANEQVVDGH----CERCDTLVEKKELEQWYFKTTEFSEELLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +    +       G
Sbjct: 207 DTLDGWPEKVRLMQKNWIGKSHG 229



 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIY 274
           K        M  ++D+   Y+      +  D        K+ P D ++ G +    H +Y
Sbjct: 472 KKAKREVDTMDTFVDSSWYYMRYADNQNTEDIFDSEVIDKWLPVDQYIGGVEHAILHLLY 531

Query: 275 WPA-------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
                       ++ ++   K + + G +L  G K+SKS GN++ P+E++E+ G D  R 
Sbjct: 532 ARWFTKAFNKMGMTKHVEPFKNLLTQGMVLMDGSKMSKSKGNIVSPVEMVEKYGADTARL 591

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTE 385
           F++      +D  + + G++         G    ++R   ++  L D   +    G  T+
Sbjct: 592 FILFAAPPERDLEWSEQGVE---------GCFKFLNRVFRVVDELADIAKVNHEFGELTK 642

Query: 386 SDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
            D+++ +  +  L+++ E++      + A+A ++ L++++ +Y          K    R 
Sbjct: 643 EDKAMRAKTNSTLKKVSEDLSDKFGFNTAIAALMELINDLYKY----------KELDTRN 692

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+    E I  + ++L  F P L  +++ ++ 
Sbjct: 693 DAVIK---EAIEAVVVILAPFAPHLGEELWSMIG 723


>gi|170288577|ref|YP_001738815.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176080|gb|ACB09132.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 824

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 89  AIEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 149 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 205 LDKLTGWPEHVKTMQRNWIGKSTG 228



 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 427 QRYWGAPIPIIYCEKCGIVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKRTKCPICGG 486

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 487 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 537

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 538 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 596

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 597 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FIKRLWNTFYTVLPFVKEENTENLV 654

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 655 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 711

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 712 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 742


>gi|296387484|ref|ZP_06876959.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 873

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +   D L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++ P +   ++           G+
Sbjct: 207 DNLPGWPEQVKTMQRNWIGKSRGM 230



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 80/197 (40%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++          +   G++         G   
Sbjct: 631 EKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVE---------GANR 681

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      A  ++ + +       +++  +++ Q+   + A+A 
Sbjct: 682 FLRRVWRLAHAHVSAGLPGALDVAALNDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIAA 741

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++             L+K  P++ +    +  E +  + +LL    P + + ++  
Sbjct: 742 VMTLMN------------VLEKA-PNQDAQDRALIQEGLETVVLLLAPITPHICHVLWGQ 788

Query: 477 LFVADENRC--FQSLDQ 491
           L  A+      + S+D+
Sbjct: 789 LGHAEAVIDARWPSVDE 805


>gi|225575597|ref|ZP_03784207.1| hypothetical protein RUMHYD_03689 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037191|gb|EEG47437.1| hypothetical protein RUMHYD_03689 [Blautia hydrogenotrophica DSM
           10507]
          Length = 1038

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/499 (14%), Positives = 152/499 (30%), Gaps = 26/499 (5%)

Query: 3   EREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           +++  Y++ A  Y          H   A+    + V  R+      D+ F    +E G+ 
Sbjct: 296 KKKAYYVTCA-DYVTLTDGTGVVHTAPAFGEDDSQVGRRY------DLPFVQLVNEKGEM 348

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
                         F            +   + YD         H   C       + + 
Sbjct: 349 TE-----ETAWAGKFCKDADLPILQDLEDRGLLYDAPKFEHSYPHCWRCDTPLIYYARES 403

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDK 175
              K        +R+    N      G  G++ +   N   W      ++      ++ +
Sbjct: 404 WFIKMTAVKDDLIRNNNTINWIPESIG-KGRFGDWLENVQDWGISRNRYWGTPLNIWECE 462

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +    +  L     N              ++ K    G ++   P+ ++  W D+ 
Sbjct: 463 CGHMHSIGSKAELKEMSENCPEDIELHRPYIDEVTIKCPKCGKEMHRVPE-VIDCWFDSG 521

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSH 293
                   Y         + +PAD      D     F+++   + L+    P    +   
Sbjct: 522 AMPFAQHHYPFENQELFEQQFPADFISEAVDQTRGWFYSLLAISTLIFNKAPYKNVIVLG 581

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                 G+K+SKS GN +DP + + + G DA+R++     A      +    + +     
Sbjct: 582 HVQDENGQKMSKSKGNAVDPFDALRDYGADAIRWYFYVNSAPWLPNRFHGKAVVEGQRKF 641

Query: 354 LANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +           +   +  +D              D+ +LS  + V++ + EN++N  I 
Sbjct: 642 MGTLWNTYAFFVLYANIDKFDATKYTLDYDKLPVMDKWLLSKLNSVVKSVDENLENYRIP 701

Query: 412 RALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            +   +   V E+ + Y    +     K  P             +  ++      +P + 
Sbjct: 702 ESARALQDFVDEMSNWYVRRSRERFWAKGMPQDKINAYMTLYTALVTISKAAAPMIPFMT 761

Query: 471 NKIFDILFVADENRCFQSL 489
             I+  L  + +    +S+
Sbjct: 762 EDIYRNLVCSIDKDAPESI 780



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRH 102
            +                       K  V Q    + D +  +    D      T     
Sbjct: 96  VEKMLGLDGKEQIEEYGLEPFINHCKESVWQYKGMWEDFSQTVGFWADMEHPYVTYHDDF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     KKI +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKKIWEKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|218889730|ref|YP_002438594.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226695264|sp|B7V9C9|SYL_PSEA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218769953|emb|CAW25715.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 873

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +   D L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++ P +   ++           G+
Sbjct: 207 DNLPGWPEQVKTMQRNWIGKSRGM 230



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 80/197 (40%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++          +   G++         G   
Sbjct: 631 EKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVE---------GANR 681

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P        +++ + +       +++  +++ Q+   + A+A 
Sbjct: 682 FLRRVWRLAHAHVSAGLPGALDVATLSDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIAA 741

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++             L+K  P++ +    +  E +  + +LL    P + + ++  
Sbjct: 742 VMTLMN------------VLEKA-PNQDAQDRALIQEGLETVVLLLAPITPHICHVLWGQ 788

Query: 477 LFVADENRC--FQSLDQ 491
           L  A+      + S+D+
Sbjct: 789 LGHAEAVIDARWPSVDE 805


>gi|189500957|ref|YP_001960427.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496398|gb|ACE04946.1| valyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 918

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 126/375 (33%), Gaps = 47/375 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F  +    +K L           P    +         ++D  +SR+   W
Sbjct: 377 VEPYLSEQWFVTMKPLAEKALEVVNDGQIRFHPSHWIST-YRHWMENIRDWCISRQ-LWW 434

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D +                          ++  W  +    LTT G+    +
Sbjct: 435 GHRIPAWYDQEGKIWVAESYEDACHLAGTDKLVQDEDVLDTWFSSWLWPLTTLGWTGKDE 494

Query: 250 GSKA--KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +K    F+P D  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 495 DNKDIQAFYPTDTLVTGPDIIFFWVARMIMAGLYFKGDVPFRDVYFTSIIRDMKGRKLSK 554

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++VI+  G DALR+ +V     G+D  + ++  +     + A  I N     
Sbjct: 555 SLGNSPDPLKVIDAYGTDALRFTIVYIAPLGQDVLFGEEKCE--FGRNFATKIWNAARLV 612

Query: 366 VSMILKDYDG----------MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
                K +              P   + +++ + I      +L    +      ++    
Sbjct: 613 FMQREKVFGSSDAFSDLYQGFTPESASLSDAQQWITGRYQEMLGSYHKAFAQFRMNDITR 672

Query: 416 QVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V         D Y +  K     + +  +    + + V ++  +  +L   +P +  +I
Sbjct: 673 IVYDFFRGDYCDWYLETLKIELDGERDETKNRHAVCLAVYLLEGILKVLHPVMPFITEEI 732

Query: 474 FDILFVADENRCFQS 488
           +  +   D +     
Sbjct: 733 WHHILERDSSESIAH 747



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    +            +GH     + D+  R+ R+ G + L+  GTD  G       
Sbjct: 59  DKASYTVLMPPPNVTGSLTLGHVLNHTLQDIFIRYQRMSGREALWLPGTDHAGIATQTVV 118

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+           L IS D    + T ++    
Sbjct: 119 EKKLRKDGVSRYDLGRKEFLEHVWKWRDEYGGLILKQLRTLGISCDWRRNLFTMDEGASS 178

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R  +  +   G IY+G     +    +   +D+EV  
Sbjct: 179 AVRHAFVSLYRDGLIYRGKRIINWCPVSQTALSDEEVIM 217


>gi|116052026|ref|YP_789131.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122261173|sp|Q02SF5|SYL_PSEAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115587247|gb|ABJ13262.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 873

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +   D L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++ P +   ++           G+
Sbjct: 207 DNLPGWPEQVKTMQRNWIGKSRGM 230



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 80/197 (40%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++          +   G++         G   
Sbjct: 631 EKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVE---------GANR 681

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      A  ++ + +       +++  +++ Q+   + A+A 
Sbjct: 682 FLRRVWRLAHAHVSAGLPGALDVAALDDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIAA 741

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++             L+K  P++ +    +  E +  + +LL    P + + ++  
Sbjct: 742 VMTLMN------------VLEKA-PNQDAQDRALIQEGLETVVLLLAPITPHICHVLWGQ 788

Query: 477 LFVADENRC--FQSLDQ 491
           L  A+      + S+D+
Sbjct: 789 LGHAEAVIDARWPSVDE 805


>gi|15599182|ref|NP_252676.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107103505|ref|ZP_01367423.1| hypothetical protein PaerPA_01004575 [Pseudomonas aeruginosa PACS2]
 gi|254236880|ref|ZP_04930203.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242673|ref|ZP_04935995.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|14285775|sp|Q9HX33|SYL_PSEAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|9950178|gb|AAG07374.1|AE004816_10 leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126168811|gb|EAZ54322.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126196051|gb|EAZ60114.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 873

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +   D L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++ P +   ++           G+
Sbjct: 207 DNLPGWPEQVKTMQRNWIGKSRGM 230



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 81/197 (41%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++          +   G++         G   
Sbjct: 631 EKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVE---------GANR 681

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      A +++ + +       +++  +++ Q+   + A+A 
Sbjct: 682 FLRRVWRLAHAHVSAGLPGALDVAALSDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIAA 741

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++             L+K  P++ +    +  E +  + +LL    P + + ++  
Sbjct: 742 VMTLMN------------VLEKA-PNQDAQDRALIQEGLETVVLLLAPITPHICHVLWGQ 788

Query: 477 LFVADENRC--FQSLDQ 491
           L  A+      + S+D+
Sbjct: 789 LGHAEAVIDARWPSVDE 805


>gi|237799868|ref|ZP_04588329.1| valyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022723|gb|EGI02780.1| valyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 948

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 125/402 (31%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +         A +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTAQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|307824332|ref|ZP_07654558.1| valyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734712|gb|EFO05563.1| valyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 931

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 132/391 (33%), Gaps = 77/391 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  ++  E+     +P   +N    +++  ++D  +SR+   W
Sbjct: 360 IEPLLTDQWYVKVAPLAEPAIAAVENGDIKFVPDNWKNTYFEWMR-NIQDWCISRQ-IWW 417

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 418 GHRIPAWYDELGNIYVGNSEQAVRAKHNLPADYPLKQDEDVLDTWFSSALWPFSTLGWPE 477

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           N +   AK +P  + V G DI+ F    +          +P  +          +G+K+S
Sbjct: 478 NTE-ELAKHYPTSVLVTGFDIIFFWVARMIMMGLKFQGKVPFKEVYIHGLVRDAEGQKMS 536

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNV+DPI++I                                     +  G DALR+
Sbjct: 537 KSKGNVLDPIDIIDGIELEALVTKRISGMMQPHLAKKIEQDTRKHFPDGIQSYGTDALRF 596

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 + G+D  +D    +     +  N + N     +    +  +G+   PG +++ D
Sbjct: 597 TFASLASTGRDIRFDLARTEG--YRNFCNKLWNAARFVLMNTEEQDNGLSDAPGQYSQVD 654

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
             I S   +V       + N     A   +         D Y +  K   L+  +     
Sbjct: 655 RWITSRLHQVTAVTSNAIDNYRFDLAAQAIYEFTWNEYCDWYLELAK-ISLQSNDAALQR 713

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                 + V+  +  L    +P +  +I+  
Sbjct: 714 GTRKTLLTVLESILRLAHPIMPFITEEIWQR 744



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I           H+GHA++  I D L R+HR+ G   L+  GTD  G      
Sbjct: 28  SEGESYCIMIPPPNVTGSLHMGHAFQDTIMDALTRYHRMKGFSTLWQPGTDHAGIATQMV 87

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        + +++          +  S D     F  T +  
Sbjct: 88  VERLCNAEDKTRHDYGREKFIEKIWEWKEESGGTITRQLRRMGSSLDWNKERF--TMDDG 145

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             D  + ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 146 MSDAVQEVFIRLYEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEENGSMWHLRYPL 201


>gi|218692645|ref|YP_002400857.1| valyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218430209|emb|CAR11066.1| valyl-tRNA synthetase [Escherichia coli ED1a]
          Length = 951

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|56416247|ref|YP_153322.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197365170|ref|YP_002144807.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81821504|sp|Q5PJB8|SYV_SALPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56130504|gb|AAV80010.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096647|emb|CAR62262.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 951

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 137/401 (34%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 GIKIP------------------------------DDPQYIMYVWIDALTNYLTTTGYLD 246
           G +IP                                 + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYGNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|241767285|ref|ZP_04765017.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241362031|gb|EER58179.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 897

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 91/237 (38%), Gaps = 8/237 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     A
Sbjct: 30  TNKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 90  ALKNGVPPAKWTYENIAYMKKQMQAMGLAIDWSREVATCDPTYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y ++LL +
Sbjct: 150 YRKTQVVNWDPVDQTVLANEQVIDGKG----WRTGATVEKREIPGYYLKITDYAEELLGF 205

Query: 180 YESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                    P       E       G++         D G  I D   Y+     D 
Sbjct: 206 VTGDKLPGWPERVKLMQENWIGKSEGVRFAFTHDIAGDEGALIGDGKMYVFTTRADT 262



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 111/345 (32%), Gaps = 28/345 (8%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++        ++    +         +     G++ 
Sbjct: 489 GVTCPVCGKPARRETDTMDTFVDSSWYFMRYCDPKNADAMVAGGADYWMPMDQYIGGIEH 548

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +   +K     FWP D+  
Sbjct: 549 AILHLLYARFWTKVMRDLGLVKVDEPFTKLLTQGMVLNHIYSRRTAKGGKDYFWPHDVEH 608

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVG 321
           +  +  +           S +  LP        I ++G   +SKS  N +DP ++IE+ G
Sbjct: 609 VLDEGGKIIGAKLKNEATSGDGLLP----VGTPIDYEGVGTMSKSKNNGVDPQDLIEKYG 664

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R + +          ++   ++          + N   +  +M ++       +  
Sbjct: 665 ADTARLYTMFTAPPEATLEWNDAAVEGSYR--FLRRVWNFGVKLSAMDMEAATASAASAS 722

Query: 382 AFTESD-----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +  + +     +++      VL+++  + Q    +  ++  + +++      +  K    
Sbjct: 723 SLKDVEFGKEAKALRLEIHNVLKQVDYDYQRMQYNTVVSGAMKMINA----LEDFK---- 774

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             T+   A       +E    L   L    P +A+ ++  L  A 
Sbjct: 775 -ATDSAGAQVA---LIEGFGILLRCLYPATPHIAHSLWQGLGYAG 815


>gi|28198038|ref|NP_778352.1| valyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680665|ref|YP_001828825.1| valyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130170|sp|Q87F36|SYV_XYLFT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|254783562|sp|B2I6K9|SYV_XYLF2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28056098|gb|AAO28001.1| valyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182630775|gb|ACB91551.1| valyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579126|gb|ADN63095.1| valyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 994

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/407 (16%), Positives = 128/407 (31%), Gaps = 92/407 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+     + L   E      +P    N         ++D  +SR+   W
Sbjct: 407 IEPYLTAQWFVRMETLAARGLELVERGAVRFVPPNWINT-YRHWMENIQDWCISRQ-LWW 464

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ D
Sbjct: 465 GHRIPAWFDTQGCVYVGRSEAEVRAKHALGPEVTLTQDNDVLETWFSSQLWPFSTLGWPD 524

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       + N+P      +      +G+
Sbjct: 525 PMAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDHFTGNVPFHDVYITGLIRDAQGQ 584

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 585 KMSKSKGNVLDPLDIIDGITLDDLVAKRTTGLMQPKLAEKIAKATRKEFPDGIAPHGADA 644

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------ 378
           LR+ +      G+D  +D    +   N    N + N     +     D            
Sbjct: 645 LRFTIAALATHGRDIKFDLGRAEGYKN--FCNKLWNATRFVLMNTAGDTAHSPAQHQAGQ 702

Query: 379 -------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
                  TP   T++++ ILS  + V  E                +         D + +
Sbjct: 703 DGQDVPRTPQPRTDAEQWILSRLAAVTAEAHAQFAAYRFDLLAQALYEFAWNEFCDWFVE 762

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             KP  L   +   A++  +  + V+  L  LL   +P +  +++  
Sbjct: 763 LAKP-ALNGDDTQAAASTRHTLLYVLETLLRLLHPLIPFITEELWCQ 808



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 20/173 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  QPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMCGDDTLWQVGTDHAGIATEMVVSR 93

Query: 65  AG------------------VTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                                    +  Q+          L +S D      T + +   
Sbjct: 94  NMALEGRGETRDSLGREGFINKVWEWKQQSGDTIERQMRRLGVSADWSRSTFTMDAQPSA 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + +  ++G IY+G     +    +   +D EV    +     +   P+
Sbjct: 154 AVTEAFVRWYEEGLIYRGQRLVNWDPVLKTAISDLEVENVQEEGMLWSIRYPL 206


>gi|315617671|gb|EFU98277.1| valyl-tRNA synthetase [Escherichia coli 3431]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWDRERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|301028095|ref|ZP_07191373.1| valyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299878812|gb|EFI87023.1| valyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|124485230|ref|YP_001029846.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|124362771|gb|ABN06579.1| valyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 865

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 143/396 (36%), Gaps = 25/396 (6%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY---YNDDEVYKGADGQYYNAQHN 155
            K          K++    D  K         R +      ++ + +   +G        
Sbjct: 307 SKECRAAILADMKELGILKDQKKIEQRVGGCWRCKTPIEILSERQWFVKVNGGDIVKAAR 366

Query: 156 PVQWMEE------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD--- 206
            ++W  E      E +  ++            + P  +   ++  E+I   ++ L     
Sbjct: 367 EIKWYPEHMLQRLENWADQMEWDWCISRQRLFATPIPVWFCDKCGELILPDEADLPVDPT 426

Query: 207 -LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                      G       + ++  W+D+    L  TG+  +       ++PA L   G 
Sbjct: 427 IEKPKHACPKCGGTEFTGEKDVLDTWMDSSITDLHVTGWDGSGRP---PYFPAQLRPQGH 483

Query: 266 DILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+R  A Y    +  L    P    + +   +   G K+SKS  NVI P +V+   GVD
Sbjct: 484 DIIRTWAFYTILRSVALLGEKPWDNILVNGMVLGEDGFKMSKSRDNVIGPEDVMGPYGVD 543

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR +     + G+D  ++ + +     +     + N+V  S+  I K+   +  T    
Sbjct: 544 ALRQWAAAGSSTGQDILFNWNDVVAA--SRFQTKMWNIVRFSLMQIQKE-SPVPETDAPS 600

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
           T  D  +L+  S+ + E+ E+M   L  + L  +         D Y +  K   L   +P
Sbjct: 601 TLIDRWMLANLSKTVAEVTESMDAYLFDKGLKIIREFAWNVMADEYLEFVK-GRLYSEDP 659

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            RA  + Y     +  L  +L  ++P  A + +  L
Sbjct: 660 LRAGAI-YTLKTTLDALCTMLSPYIPFFAQECYHHL 694



 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ +  + T   YP  + HIGHA   +  D++AR+ R+ G +V+F  G D HG      
Sbjct: 34  SKKPQYVMDTPPPYPTGKLHIGHALNWVYMDIIARYKRMMGFNVMFPQGWDCHGLPTEVK 93

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                 +N    R     +  S D  +   T E  ++   
Sbjct: 94  VEETHHITKNDVSREEFRKMCRDLTVENITRMRQSLRTMGFSVDWSNEYITMEPYYYAKT 153

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           ++ + ++   G IY+  +   +  R E
Sbjct: 154 QLSFLRMLKAGYIYQDEHPVNFCTRCE 180


>gi|88705745|ref|ZP_01103455.1| Leucyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700258|gb|EAQ97367.1| Leucyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 819

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +K Y  +   YP+ + H+GH     I+D +AR+ R+ G +VL   G D  G     AA
Sbjct: 31  EGDKFYCLSMFPYPSGKLHMGHVRNYSISDAIARYQRMLGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  + R+    L  S+  D  + T    ++   +  + ++ +KG +Y
Sbjct: 91  IANKTAPAKWTYSNIGHMREQLKALGFSFDWDRELATCTPEYYRWEQWFFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            ++  E   +F R++AY ++LL   
Sbjct: 151 KKMATVNWDPVDQTVLANEQVIDG----RGWRSGALIERREIPQWFIRITAYAEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +  P+            G
Sbjct: 207 DTLEGWPEPVRIMQRNWIGKSRG 229



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 103/268 (38%), Gaps = 40/268 (14%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y       +      D  KA +W P D +V G +    H +Y   F        
Sbjct: 496 FVQSSWYYARFTCPEFADGMLDKEKADYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEG 555

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            LS++ P   ++ + G +L  G K+SKS GN +DP  +I+  G D +R F +      + 
Sbjct: 556 LLSSDEPFT-RLLTQGMVLKDGAKMSKSKGNTVDPQSLIDSHGADTVRLFSLFAAPPDQS 614

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCS 395
             + +DG++         G    V R   ++ +  D          A  + +  +     
Sbjct: 615 LEWSEDGVE---------GAQRFVKRLWRLVHEHTDQGPAPALDSAALNDGERDVRRKIH 665

Query: 396 RVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + ++ ++M  +   + A+A V+ L +E+ R         L    P   +    V  E 
Sbjct: 666 ETIAKVSDDMGRRQTFNTAIAAVMELCNELSR---------LTIDGPQSRA----VMQEG 712

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE 482
           +  +  +L   VP + + ++ IL    +
Sbjct: 713 LDAVVRMLVPIVPHICHHLWGILGGEGD 740


>gi|323189861|gb|EFZ75139.1| valyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGANVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  + +D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGHDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|193069848|ref|ZP_03050798.1| valyl-tRNA synthetase [Escherichia coli E110019]
 gi|192956902|gb|EDV87355.1| valyl-tRNA synthetase [Escherichia coli E110019]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDTLRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|307719273|ref|YP_003874805.1| isoleucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532998|gb|ADN02532.1| isoleucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 1048

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 128/394 (32%), Gaps = 14/394 (3%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +++ IS      +       +  ++ Y+    +  G  G       N   W      ++ 
Sbjct: 407 IYRAISSWFVAVEKIKERMIANNEKIYWMPSHIKHGRFG---KWLENARDWAISRNRYWG 463

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYI 227
                 +  +   +         +    +            ++      G  +   P+ +
Sbjct: 464 NPLPIWRCEACGHTECIGSRQELKEKSGVWPEDLHKHFVDEITYPCPSCGGTMRRIPE-V 522

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           +  W ++         Y         + +PAD    G D     F+ +   +  L    P
Sbjct: 523 LDCWFESGAMPYAQNHYPFENKEKFERHFPADFVCEGIDQTRGWFYTLLVLSTALFDKPP 582

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKD 344
               + +   +   G+K+SKS  N  DP +VIE  G DALR FL+       ++  Y  +
Sbjct: 583 FLNNITTGLVLAADGKKMSKSERNYTDPKDVIETFGADALRLFLMHSAVVRAEELRYSDE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G+++ +   L               +       P        D  ILS   R++  + E 
Sbjct: 643 GVREVLKNVLIPLWNAYAFFVTYANIDGIRPTAPPEDPAHPLDRWILSEAQRLVLTVTEE 702

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQ 463
           M    + RA+  +++ +  ++ ++  +      K+  D            V+  L  +  
Sbjct: 703 MDRYDLVRAIDPIVAFIDSLNNWYIRRSRRRFWKSESDADKREAYATLWTVLMTLVKVAA 762

Query: 464 AFVPKLANKIFDILFVADENRC-----FQSLDQR 492
             VP +  +I+  L   +         +  +D+R
Sbjct: 763 PIVPFITEEIYRNLRTEEMPDSVHLCDWPEVDER 796



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     + D+  R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPGTVKDIFPRYKTMRGYKVERRFGWDCHGLPVEYEMEKELGISGKR 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +  + +R +   +   + +D+  +T +  + +T   + K++
Sbjct: 107 QIEEYGVARFNEACRSIVLRYVKEWRQIVTRMGRWVDFDNDYKTMDPDYMETIWWVMKQL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG +Y+G Y   Y  R     ++ E+  G
Sbjct: 167 WEKGLLYEGYYILPYCPRCSTVLSNHELNLG 197


>gi|281412227|ref|YP_003346306.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373330|gb|ADA66892.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 824

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 89  AIEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 149 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 205 LDKLTGWPEHVKTMQRNWIGKSTG 228



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 427 QRYWGAPIPIIYCEKCGVVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKRTKCPICGG 486

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 487 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 537

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 538 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 596

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 597 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FVKRLWNTFYTVLPFVKEENTENLV 654

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 655 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 711

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 712 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 742


>gi|306815524|ref|ZP_07449673.1| valyl-tRNA synthetase [Escherichia coli NC101]
 gi|305851186|gb|EFM51641.1| valyl-tRNA synthetase [Escherichia coli NC101]
 gi|320193624|gb|EFW68259.1| Valyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|324005159|gb|EGB74378.1| valyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|261342659|ref|ZP_05970517.1| valine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288315308|gb|EFC54246.1| valine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 133/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNEGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIESHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAFREALDSYRFDIAAGILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +           + V+  L  L    +P +   I+  
Sbjct: 727 GSEAELRGTRNTLITVLEGLLRLAHPVIPFITETIWQR 764



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|256383708|gb|ACU78278.1| valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384539|gb|ACU79108.1| valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455763|gb|ADH21998.1| valine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 872

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 35/347 (10%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++  +++ ++    S  +      R ++V++   +   D  +SR+   W
Sbjct: 353 VEPYLSDQWFVKMDKFKNMVIDLQNSDNKINFYPNRFSDVLNRWMTNAHDWCISRQ-LWW 411

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G +I                           Q ++  W  +     +T       +    
Sbjct: 412 GHQIPCWYHKKTNEMYVGINPPSDIENWTQDQDVLDTWFSSGLWAFSTLLNNKGLESEYF 471

Query: 254 KFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           K + P  + V G DI+ F    + +     +  +P    +           K+SKSLGN 
Sbjct: 472 KNYFPTSVLVTGYDIIFFWVARMIFQTLEYTKQIPFKDVLIHGLVRDELNRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP++VI   G D+LR FL+     G+D  Y  + +    N    N + N        + 
Sbjct: 532 IDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNEKILASSN--FINKLWNASRYVFLNLD 589

Query: 371 KDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           KD+             +++ IL+  S+    + E M       A   +   V       Y
Sbjct: 590 KDFKFDQNFYKTDLEITNQWILTELSKTQAYVYEKMNKYEFSLAGNHLWDFVWNKYCSWY 649

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  K   +   N             V++++ I++   +P ++ +I+
Sbjct: 650 IEFSK---VNLNNDKFNHQTKQTLFYVLKEILIMIHPLIPFVSEEIY 693



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I         + HIGHA++  + D + RF +L G D LF  G D  G      
Sbjct: 34  SNKPKFSIILPPPNVTGKLHIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSGISTQVK 93

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ +   R     L +S D      T ++  +
Sbjct: 94  VEAKLKQQGIDKNKLGREKFLLEAWKWKEEYANIIRKQWAKLGLSLDYSTEKFTLDEDIN 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ K  +   IYK      +    +   ++ EV  
Sbjct: 154 QIVKEIFVKFYNDQIIYKDKQIVNWDPEQKTAISNVEVIY 193


>gi|148269892|ref|YP_001244352.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|172047877|sp|A5IKQ3|SYL_THEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147735436|gb|ABQ46776.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 824

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     L ISYD    I T ++ ++   + ++ ++   G  
Sbjct: 89  AIEKGIHPEEWTRKNINTIRGQVKKLGISYDWSREIATCDEEYYKWTQWIFLQLYKNGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  + +    +++V  G            V     E +FF+++ Y ++LL+ 
Sbjct: 149 YKKKAAVNWCPKCKTVLANEQVKDGK----CERCGTSVTIRHLEQWFFKITDYAERLLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 205 LDKLTGWPEHVKTMQRNWIGKSTG 228



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L                +E     K  +   
Sbjct: 427 QRYWGAPIPIIYCEKCGVVPVPEEDLPVRLPKDVEFLPTGQSPLSFHEGFKRTKCPICGG 486

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y+         +     +W P D ++ G +
Sbjct: 487 EAQRET---------DTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGVE 537

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             L+ + P    +F+ G I   G K+SKS GNV+ P E+IE
Sbjct: 538 HAVLHLLYSRFVTKVLHDLGYLNFDEPFT-NLFTQGMIYKDGAKMSKSKGNVVSPDEMIE 596

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          + N     +  + ++    + 
Sbjct: 597 KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHR--FIKRLWNTFYTVLPFVKEENTENLV 654

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
              +   +++ +      ++++I E+++     + A++ ++ LV+ + +Y ++  Q+ W 
Sbjct: 655 LKNS---TEKELRRKLHSIIKKITEDIEGGFKFNTAISGLMELVNHLSQYLNSVPQEEWN 711

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K            +  E++ +L + L  F P LA + +  L 
Sbjct: 712 RK------------LLREIVEKLTLALSPFAPHLAEEFWHDLG 742


>gi|108805230|ref|YP_645167.1| isoleucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108766473|gb|ABG05355.1| Isoleucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 1068

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 91/256 (35%), Gaps = 5/256 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+ +      GY  +      + +PAD    G D     F+++   + +L    
Sbjct: 544 VLDVWFDSGSMPFAQWGYPRSGREHFRRQFPADFICEGVDQTRGWFYSLLAVSTMLFGKS 603

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                +     +  +G K+SKSLGNVIDP  + E+ G DALR+ L    +      + ++
Sbjct: 604 SYKTCMALGIILDAEGRKMSKSLGNVIDPWSLFEKQGADALRWALCTASSPVNTRRFSEE 663

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIR 402
            + + V   L               +  +D              D  +LS     ++ + 
Sbjct: 664 QVDEAVRKYLLTLWNTYSFFVTYARIDGFDPERDRVPLEQRGLMDRWVLSELHATIRTVT 723

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E +    +  A   +   V E+ + Y    +    K               E +  +  L
Sbjct: 724 ERLDAYDVTTAGRAIQDFVDELSNWYVRRSRRRFWKGEEDTDKRAAHSTLYECLTTVIRL 783

Query: 462 LQAFVPKLANKIFDIL 477
              F P +A  I+  L
Sbjct: 784 TAPFTPFVAEAIYRNL 799



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 19/182 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N +P   H     + D++ R+  + G  V    G D HG  +    + 
Sbjct: 68  KPFVFYEGPPTANGRPGFHHVPARTLKDLIPRYKTMRGYRVERKGGWDCHGLPVELEVEK 127

Query: 65  ----------AGVTTKVF-------VDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDT 105
                          + F       V +   ++R M+D +    D     RT +  + ++
Sbjct: 128 ELGLSGKKDVERYGIEEFNRLCRRSVFRYVDDWRRMSDRMGFWVDMENAYRTLDNTYIES 187

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
                K + ++G +Y+      +  RD+   +  EV +G       + +  +   +EEG 
Sbjct: 188 VWWALKTLHERGLLYEDYKVAPHCPRDQTSLSSHEVAQGYKDVVDPSVYVRLPLRDEEGT 247

Query: 166 FF 167
             
Sbjct: 248 SL 249


>gi|126461470|ref|YP_001042584.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166225527|sp|A3PHJ6|SYV_RHOS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|126103134|gb|ABN75812.1| valyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 987

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ +      A+++P ++ + G DI+ F    +   
Sbjct: 551 PVWRDPD-VLDTWFSSGLWPIGTLGWPEETP-ELARYFPTNVLITGFDIIFFWVARMMMM 608

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +   +P             KG+K+SKSLGNV+DP+E+I+E G DA+R+ L    A G
Sbjct: 609 QLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMG 668

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D       ++     +    + N    + ++ + + +      P A    +  I+    
Sbjct: 669 RDLKLSTARIQG--YRNFGTKLWNACRFAEMNGVWEGHGTQAAPPAATATVNRWIIGETG 726

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           RV +E+   +       A   + + V     D Y +  KP      + + A+        
Sbjct: 727 RVREEVDAALAAYRFDSAANALYAFVWGKVCDWYVEFSKPLF----DTEAAAETRATMGW 782

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ Q  +LL   +P +   ++
Sbjct: 783 VLDQCMVLLHPIMPFITEDLW 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 53/157 (33%), Gaps = 21/157 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVER 95

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHD 104
                                   + +Q+     +    L  S D + R   T +     
Sbjct: 96  ELARAGNPGRREMGREAFLEKVWEWKEQSGGTIVNQLKRLGASCD-WSRNAFTMDPNFQR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               ++  + +KG IY+G     +    E   +D EV
Sbjct: 155 AVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEV 191


>gi|117923746|ref|YP_864363.1| leucyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|171460773|sp|A0L4R4|SYL_MAGSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117607502|gb|ABK42957.1| leucyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 859

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E  Y+     YP+ + H+GH     I DV+AR+ R+ G  VL   G D  G     AA
Sbjct: 32  DKETFYLLVMFPYPSGRIHMGHVRNYAIGDVIARYQRMQGKAVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  + +  +N    R+    + +SY  D    T ++ +    ++L+ ++ +KG +Y
Sbjct: 92  AQRKVHPRDWTYENIATMREELKSMGLSYDWDREFATCDEDYAHAEQVLFLRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G           PV+  E   +FFR++ Y D+LL   
Sbjct: 152 RKHAFVNWDPVDHTVLANEQVIDG----CGWRSGAPVEQRELNQWFFRITHYADELLDNL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +            G
Sbjct: 208 QHMDGWPETVRTMQTNWIGKSHG 230



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 50/370 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P+Q   E  +    +  +          P+   P  R  + +                  
Sbjct: 453 PIQLPNEVDFSEPGNPLERHPSWKTCDCPQCGQPARRETDTMDTFMESSWYFLRYCSPHM 512

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G+ +    +  +  W+    N               A+F+   L  IG+      F  +
Sbjct: 513 GGVPL---DKAAVDRWM--PVNQYVGGIEHAVLHLLYARFFHKALRDIGEVSCDEPFARL 567

Query: 274 YWPAF-------LLSANLPLPKKV-----------FSHGFILHKGEKISKSLGNVIDPIE 315
                               PK+V                 + + EK+SKS  NV+DP +
Sbjct: 568 LTQGMVRKDTHRCAQHGWRYPKEVQERDGALYCIECGGAVTVGRNEKMSKSKHNVVDPND 627

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD- 374
           +I   G D  R F++      +D  ++  G+         +G    + R   ++L   + 
Sbjct: 628 LIAGYGADTARLFMLFAAPADRDLEWNDSGV---------DGAWRFLGRVWRLVLAAIER 678

Query: 375 GMIPTPGAFTESDESIL---SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
                    T +DE +    S     + ++ E++  Q  + A+A V+ + +         
Sbjct: 679 CGERQACTTTPADEQLKAFRSQLHNTIVKVTEDLNRQSFNTAIAAVMEMSNGA------- 731

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                 K           +  E  +    LL  + P +  +++  +    E         
Sbjct: 732 --IATFKGEDRLTGEASALLWETAQVTVKLLHPYAPHMTEELWQRMG---EQSLLSDTPW 786

Query: 492 RLKPGFMLHK 501
            L     L K
Sbjct: 787 PLADAAALVK 796


>gi|317475879|ref|ZP_07935136.1| valyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908039|gb|EFV29736.1| valyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 894

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 123/365 (33%), Gaps = 58/365 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 427 GHRIPAYFLPEGGYVVAATPEEALKLAQEKTGNPALKAEDLRQDEDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               + NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 487 LFDGILNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++I+  G D +R  ++     G D  +D    ++  N      
Sbjct: 547 KLGRKMSKSLGNSPDPLDLIDRYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             N +  +  +I   +    +P P A   +     S  + V  E+ +      +  AL  
Sbjct: 601 FNNKIWNAFRLIKGWEVSAEVPMPEAAGLAMRWFESKQNAVAAEVADLFGKYRLSEALMA 660

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P         V   T+     L  LL  F+P +  +
Sbjct: 661 VYKL------FWDEFSSWYLEMIKPAYGQPINKKVYETTIGFFDNLLHLLHPFMPFITEE 714

Query: 473 IFDIL 477
           ++  +
Sbjct: 715 LWQHI 719



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|300957120|ref|ZP_07169361.1| valyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300316138|gb|EFJ65922.1| valyl-tRNA synthetase [Escherichia coli MS 175-1]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 131/401 (32%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N +       ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYEN-MYFSWMCDIQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|126658249|ref|ZP_01729399.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620398|gb|EAZ91117.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 853

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     A
Sbjct: 30  SDKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  +    +  +N    +     L   I +D  + T    ++   + L+ +    G  
Sbjct: 90  AIDRNIPPADWTYKNIAQMKQQLQTLGLSIDWDREVATCSPDYYKWTQWLFLQFYQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ++G  + +    V+      +FF+++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV--DSEGYSWRSGAK-VERKLLRQWFFKITDYAEQLLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 207 LDKLSGWPDRVKLMQENWIGKSVG 230



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 81/196 (41%), Gaps = 30/196 (15%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    EK+SKS  N +DP EV+ + G D  R F++ +    KD  +D   +
Sbjct: 600 PKDPDTGDDLDVFYEKMSKSKYNGVDPQEVLGKYGADTARMFILFKAPPEKDLEWDDADV 659

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIREN 404
           +         G    ++R   ++    +    + +    ++ ++ +       ++EI E+
Sbjct: 660 E---------GQFRFLNRVWRLVNGYAEKQGEVISNQELSKEEKDLRRAIHTAIKEISED 710

Query: 405 MQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILL 462
           ++ +   + A+++++ L + ++                  A  +      E I  L ILL
Sbjct: 711 LEGDYQFNTAVSELMKLSNALN-----------------DAKCINSTVYQEGIETLLILL 753

Query: 463 QAFVPKLANKIFDILF 478
             F P +A +++  L 
Sbjct: 754 APFAPHIAEELWHNLG 769


>gi|220935447|ref|YP_002514346.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782842|sp|B8GV13|SYL_THISH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219996757|gb|ACL73359.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 817

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA  
Sbjct: 33  EPFYCLSMFPYPSGRLHMGHVRNYTIGDVISRYQRMQGRNVLQPMGWDAFGLPAENAAIK 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +  +N    R     L   Y  D  + T    ++   + L+ ++  KG  YK 
Sbjct: 93  HLVPPAKWTYENIAYMRGQLQRLGFGYDWDRELATCRPEYYRWEQWLFTRLVKKGLAYKK 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G           PV+  E   +F R++ Y ++LL   + 
Sbjct: 153 TAMVNWDPVDQTVLANEQVIDGKG----WRSGAPVERREIPQWFLRITDYAEELLKGLDG 208

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +            G
Sbjct: 209 LEGWPEQVRTMQRNWIGRSEG 229



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 123/348 (35%), Gaps = 45/348 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+    + G           +L    +      PI+R  E I     
Sbjct: 420 WGVSRQRYWGCPIPIINCPDCGPVPVPEEQLPVVLPEDVAFDGVGSPIKRMPEFIDT--- 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN--PDGSKAKFW-PAD 259
                       + G K   +       + ++   Y   T    +      +A+ W P D
Sbjct: 477 ---------TCPECGGKAERETD-TFDTFFESSWYYARYTCKDADGAMLDERARHWLPVD 526

Query: 260 LHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F         +  + P   ++ + G +L  G K+SKS GN +
Sbjct: 527 QYIGGIEHAVLHLLYARFFHKLMRDEGLVDGDEPFT-RLLTQGMVLKDGAKMSKSKGNTV 585

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP  +IE  G D +R F++          +   G++       A      + + V   ++
Sbjct: 586 DPEALIERYGADTVRLFMMFAAPPELSLEWSDSGVEG------AYRFLKRLWKQVHDHVQ 639

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDA 430
                     A     +++     + L ++ +++  +   + A+A  + L++E+ R+ D 
Sbjct: 640 GGAAPALDKAALNADQQALRRKLHQTLAKVSDDIGRRTTFNTAIAACMELMNELGRFED- 698

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  K+   RA     V  E +    ++L   VP +A+ ++  L 
Sbjct: 699 -------KSGQGRA-----VMQEALETTVLMLSPIVPHIAHALWSELG 734


>gi|71280655|ref|YP_268460.1| leucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123761059|sp|Q484Q5|SYL_COLP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71146395|gb|AAZ26868.1| leucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 863

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 94/233 (40%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y      YP+ + H+GH     + DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  DKEKFYCLAMFPYPSGRLHMGHVRNYSLGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    R+    L   YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKTAPGKWTYENIDYMRNQLQSLGFGYDWGRELATCKPDYYRWEQWFFTQLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  +   +F +++ Y ++LL   
Sbjct: 151 KKNATVNWDPVDQTVLANEQVIDG----RGWRSGALVERKQIPQWFIKITDYAEELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           +   E+   ++           G      ++ S ++FD     PD    + YV
Sbjct: 207 DQLTEWPEQVKTMQRNWIGRSQGVEMTFAVADSTESFDIYTTRPDTLMGVTYV 259



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 76/190 (40%), Gaps = 17/190 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP EVIE+ G D +R F++      +   +   G++          +  
Sbjct: 617 SKMSKSKNNGIDPQEVIEKYGADTVRLFIMFTSPPEQTLEWSDAGVEGAHR--FVKRVYK 674

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           L    V     +   +           + +     + + ++ +++  +   + A+A ++ 
Sbjct: 675 LAHEFVE-STNNSAVVDIAELTLNADHKKLRRELHKTIAKVTDDIGRRNTFNTAIAAIME 733

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++ + +           K N D    V+    E +R + ++L    P L + ++ ++  
Sbjct: 734 LMNHLGK----------AKVNSDEDKAVMQ---EAVRAVVLMLTPITPHLCHHLWQLVGG 780

Query: 480 ADENRCFQSL 489
           +DEN    S 
Sbjct: 781 SDENVEDASW 790


>gi|193063629|ref|ZP_03044717.1| valyl-tRNA synthetase [Escherichia coli E22]
 gi|192930616|gb|EDV83222.1| valyl-tRNA synthetase [Escherichia coli E22]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|189500815|ref|YP_001960285.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496256|gb|ACE04804.1| isoleucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 1080

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 113/299 (37%), Gaps = 13/299 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G +    P+ ++ VW D+ +       Y           +PAD    G D     F+ ++
Sbjct: 536 GRRYCRTPE-LIDVWFDSGSMPFAQLHYPFENREVFDTTFPADFIAEGVDQTRGWFYTLH 594

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L+         V +   +  KG+K+SKS GNV+DP E +E+ G D+LR++L+    
Sbjct: 595 AIGALIFDKPAYKNLVVNGHILDRKGQKMSKSKGNVVDPFETMEKYGADSLRWYLILSSP 654

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESIL 391
             +   ++ D +++           N  +  V     D       P   +E    D  I+
Sbjct: 655 PWRPKSFNSDEIEEEQ-RKFFRAFINSYNFFVMYSNVDGFTFSEEPIPVSERSGLDRWII 713

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQK--PWELKKTNPDRASTV 447
           S  + ++  + + M+   +  A+  +         + Y    +   W+  +  PD+ +  
Sbjct: 714 SSLNSLVSGVEQRMEQYDLTGAIRLINDFTVDDLSNWYIRRSRKLFWK-GEAGPDKTAA- 771

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
                + +  +A LL  F P +A++IF  L          S+     P         P+
Sbjct: 772 YQSLYQCLETVAKLLAPFTPFIADRIFMNLNAVTGREPVASVHLCDLPSVDAGAIDSPL 830



 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-----NAGV 67
               N +P + H +   I D++ RF  + G  V    G D HG  +  A +         
Sbjct: 49  PPTVNGKPGVHHVFSRTIKDIVCRFKTMQGYKVPRKAGWDTHGLPVEIAVEKKLGLKNKA 108

Query: 68  TTKVF----------------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
             + +                +D N   +  + +++   +  DD   T    + ++    
Sbjct: 109 QVEEYGADEFNDVARELVYHHIDDNREGWGRLTEMMGYWVDMDDPYITCTNEYMESVWWA 168

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 169 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 205


>gi|187733491|ref|YP_001882958.1| valyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187430483|gb|ACD09757.1| valyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|313895895|ref|ZP_07829449.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975320|gb|EFR40781.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 843

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 51  KPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMAGYNVLHPMGFDSFGMPAENAAI 110

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N +     + +SY  D  + T  + ++   + +++    KG  YK
Sbjct: 111 KNNVHPAAWTYANIENMKRQQRAMGLSYDWDREVVTCREDYYRWTQWIFELFYKKGLAYK 170

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +         +++V  G          + VQ      +FF+++ Y D+LL+  +
Sbjct: 171 KEASVNWCDTCGTVLANEQVEDGK----CWRCKSEVQKKNLAQWFFKITDYADELLADLD 226

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
             P +   ++   E       GL
Sbjct: 227 KLPGWPERVKTMQENWIGRSEGL 249



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 98/284 (34%), Gaps = 29/284 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           L               D              Y          D     +W P D ++ G 
Sbjct: 499 LHCKCPKCGGDATRETDTMDTFICSSWYYFRYADPHNAERPFDRDAVNYWAPVDQYIGGI 558

Query: 266 DILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y   F        +L  + P    + + G ++  G K+SKSLGNV+ P E+I
Sbjct: 559 EHAILHLLYARFFTKVLRDTEMLDFDEPFT-NLLTQGMVIKDGAKMSKSLGNVVSPEEII 617

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +  G D  R F++      +D  +   G++        + +  ++ +    I    D   
Sbjct: 618 DRYGADTARLFILFAAPVERDLDWSDQGVEGAFR--FLSRVWRILGQFEETIRSASDAY- 674

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                 +  +  +  V    ++++ E++    + + A++ V+ LV+    +         
Sbjct: 675 -DTDTLSTEETELRRVLHSTVKKVTEDVRDRFMFNTAISSVMELVNAFYAF--------- 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                DRA     +  E    L  +L  F P +  +++  LF  
Sbjct: 725 ----QDRALH-PGLAREAASALVRMLAPFAPHITAELWSRLFTG 763


>gi|256419444|ref|YP_003120097.1| isoleucyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034352|gb|ACU57896.1| isoleucyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 1183

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 106/283 (37%), Gaps = 6/283 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++      ++ VW D+         Y  +     AK +PAD    G D     F+ ++  
Sbjct: 645 QLMYREPDLVDVWFDSGAMPYAQWHYPFDNKEEFAKSFPADFIAEGVDQTRGWFYTLHAL 704

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             +L  N+     V +   +   G K+SKS+GNV+DP   +E+ G DA R++L+   +  
Sbjct: 705 GTMLFDNVAYKTVVSNGLVLDKNGNKMSKSVGNVVDPFATLEQYGADATRWYLITNASPW 764

Query: 337 KDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               +D +G+++             N  +   ++    +           E D  I+S+ 
Sbjct: 765 DSMKFDVEGIREVQRKLFSTLYNTYNFFAMYANLDKFTFSEAYVPMEERPEIDRWIISLL 824

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++++     +    +A   + S V E   + Y    +    K        +      
Sbjct: 825 NTLVKDVTGYFDDYEPTQAGRAIQSFVDEHLSNWYVRLCRRRFWKGEYAQDKISAYQTLY 884

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           E +  LA L+    P  A+ +F  L          S+   L P
Sbjct: 885 ECLETLARLMAPVSPFFADWLFGNLNKVSGRHAEASVHHMLFP 927



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 21/154 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     + D++ R+  ++G  V    G D HG  +    +     TK  
Sbjct: 49  PPSANGMPGIHHVISRTLKDLVCRYKTMNGFQVKRKGGWDTHGLPVELGVEKMLGITKEA 108

Query: 73  VDQ-------NSRNFRDMADVLDISYDDFIR-------------TTEKRHHDTCRILWKK 112
           + +       N     ++    D  +DD  R             T +  + ++      +
Sbjct: 109 IGKTISIEDYNKACRAEVLKFKD-KWDDLTRQMGYWVDLKSPYITFDNNYIESLWWCLSE 167

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +  K  +YK      YS       +  E+     
Sbjct: 168 LYKKNLLYKSVSIQPYSPAAGTGLSSHELNMPGC 201


>gi|256827875|ref|YP_003156603.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577051|gb|ACU88187.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 829

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 6/224 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ EK Y+     YP+ + H+GH     I DV+AR+ R+ G +V    G D  G     A
Sbjct: 29  RDGEKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARYKRMQGFNVFHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N    R     L  SY  D  I T    ++   +  + K  +KG +
Sbjct: 89  AIKNNTHPAKWTYENIAYMRAQLKRLGYSYDWDREIATCHPGYYRFEQEFFLKFLEKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V +G          + VQ  +   +F R++ Y ++LL+ 
Sbjct: 149 YRKNAPVNWCPSCHTVLANEQVEEG----LCWRCDSEVQQKQLSQWFLRITDYAEELLAD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +   +         +     KS   ++S   K  D  I +   
Sbjct: 205 LDKLTDGWPERVLTMQRNWIGKSIGAEISFKVKDLDEAIPVFTT 248



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 97/237 (40%), Gaps = 23/237 (9%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKIS 304
           A + P D ++ G +    H +Y   F         L+ + P  K + + G +L  G K+S
Sbjct: 526 AYWMPVDQYIGGIEHAILHLLYSRFFVKALRDEGYLTHDEPF-KNLLTQGMVLLHGSKMS 584

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E+I + G D +R F +      KD  ++  G++    +   N +  LV  
Sbjct: 585 KSKGNVVDPDEMIAKYGADTVRLFCLFAAPPEKDLEWNDKGIEGA--SRFLNRLWRLVDE 642

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSE 423
            +  +L      +   G   ES+  +       ++ +  +++N    + A+A ++ LV+ 
Sbjct: 643 -LDDVLSPVGTCVSVEGTLGESEAELRRKEHDTVRRVERDIENKFQFNTAIAAMMELVNS 701

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +             K +   +     +    I  L + L    P +  +++D +   
Sbjct: 702 L----------YATKDDLRASKNGPRLLSSAISSLLVTLSPIAPHVCEEVWDRMGYT 748


>gi|157158681|ref|YP_001465766.1| valyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157080711|gb|ABV20419.1| valyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|91213813|ref|YP_543799.1| valyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110644617|ref|YP_672347.1| valyl-tRNA synthetase [Escherichia coli 536]
 gi|117626602|ref|YP_859925.1| valyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|215489600|ref|YP_002332031.1| valyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|237703933|ref|ZP_04534414.1| valyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|331650391|ref|ZP_08351463.1| valine--tRNA ligase [Escherichia coli M605]
 gi|331660839|ref|ZP_08361771.1| valine--tRNA ligase [Escherichia coli TA206]
 gi|91075387|gb|ABE10268.1| valyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110346209|gb|ABG72446.1| valyl-tRNA synthetase [Escherichia coli 536]
 gi|115515726|gb|ABJ03801.1| valyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|215267672|emb|CAS12130.1| valyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|222036030|emb|CAP78775.1| Valyl-tRNA synthetase [Escherichia coli LF82]
 gi|226901845|gb|EEH88104.1| valyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|281181356|dbj|BAI57686.1| valyl-tRNA synthetase [Escherichia coli SE15]
 gi|294493544|gb|ADE92300.1| valyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307629334|gb|ADN73638.1| valyl-tRNA synthetase [Escherichia coli UM146]
 gi|312948911|gb|ADR29738.1| valyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315298974|gb|EFU58228.1| valyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323950673|gb|EGB46551.1| valyl-tRNA synthetase [Escherichia coli H252]
 gi|323955544|gb|EGB51308.1| valyl-tRNA synthetase [Escherichia coli H263]
 gi|324013722|gb|EGB82941.1| valyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331040785|gb|EGI12943.1| valine--tRNA ligase [Escherichia coli M605]
 gi|331051881|gb|EGI23920.1| valine--tRNA ligase [Escherichia coli TA206]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|312959164|ref|ZP_07773683.1| valyl-tRNA synthetase, class Ia [Pseudomonas fluorescens WH6]
 gi|311286934|gb|EFQ65496.1| valyl-tRNA synthetase, class Ia [Pseudomonas fluorescens WH6]
          Length = 948

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 124/400 (31%), Gaps = 87/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 429 GHRIPAWYDESGKVYVGRDEAEVRAKHNLGADVALQQDNDVLDTWFSSGLWTFSTLGWPQ 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIIDGIDLETLVHKRTSGLMQPKLAKKIEKQTRDEFADGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   +       A   +   +     D Y +  KP    +
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLWDE 722

Query: 439 TNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T P +R        V V+     L   F+P +  +I+  L
Sbjct: 723 TAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 68  TT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
            T              KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  ATGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGFLWNLKYPL 201


>gi|331665927|ref|ZP_08366821.1| valine--tRNA ligase [Escherichia coli TA143]
 gi|331056978|gb|EGI28972.1| valine--tRNA ligase [Escherichia coli TA143]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|282879442|ref|ZP_06288180.1| valine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298440|gb|EFA90871.1| valine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 879

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 129/393 (32%), Gaps = 54/393 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    + P++      +F ++  + D  L           P + +N 
Sbjct: 330 LMEKVEDYDNKVGYSERTNVPIEPKLSTQWFLKMQHFADLALQPVMDDDIQFYPSKYKNT 389

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 390 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFTVNGKQEVVVAKSAEEALEQARKKDNAVTM 447

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYW 275
              +     +  W  +    ++    +++PD  +   ++P    + G DI+ F    +  
Sbjct: 448 EQLEQDSDCLDTWFSSWLWPISLFDGINHPDNEEINYYYPTADLITGPDIIFFWVARMIM 507

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     +P     F+       G K+SKSLGN  DPI +I++ G D +R  ++     
Sbjct: 508 AGYEYKGQMPFKHVYFTGIVRDKLGRKMSKSLGNSPDPISLIDQYGADGVRMGMMLSAPA 567

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+   ++  N        N +  +  ++          P A   +     +   
Sbjct: 568 GNDILFDESLCEQGRN------FNNKIWNAFRLVKGWEVVDGEQPNACKLATAWFEAKLR 621

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +E+ +      I  AL  V  L  +     Y +  KP     T  DR  T    T++
Sbjct: 622 TTNEEVNDLFAKYRISEALMVVYRLFWDEFSSWYLEMVKP--AYGTPIDR--TTYEATLK 677

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               L  +L  F+P +  +++  L+   E    
Sbjct: 678 YFDVLLKMLHPFMPFITEELWQHLYTRAEGASI 710



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 19/175 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  ++          L  S  +D    T +++  +
Sbjct: 92  VARLKEQGINKTDLSRDEFLKHAWDWTHEHGGIILKQLRRLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY-YNAQHNPVQ 158
           +   ++  + +KG IY+G     +  + +   +D+EV    +    Y  ++N V+
Sbjct: 152 SVIKVFCDLYNKGLIYRGVRMVNWDPQAQTALSDEEVIYKDEHSKLYYLRYNVVE 206


>gi|260871010|ref|YP_003237412.1| valyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257767366|dbj|BAI38861.1| valyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323176172|gb|EFZ61764.1| valyl-tRNA synthetase [Escherichia coli 1180]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNKDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|253775119|ref|YP_003037950.1| valyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164183|ref|YP_003047293.1| valyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|242379778|emb|CAQ34605.1| valyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253326163|gb|ACT30765.1| valyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253976086|gb|ACT41757.1| valyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253980242|gb|ACT45912.1| valyl-tRNA synthetase [Escherichia coli BL21(DE3)]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|193783837|dbj|BAG53819.1| unnamed protein product [Homo sapiens]
          Length = 546

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 30/284 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 260 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 319

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 320 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 379

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 380 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCR 439

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 440 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 498

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             WG  +P +     + YVW DA   YL+ T    +      K 
Sbjct: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN 542


>gi|170021734|ref|YP_001726688.1| valyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169756662|gb|ACA79361.1| valyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|110808002|ref|YP_691522.1| valyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110617550|gb|ABF06217.1| valine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGANVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|320190608|gb|EFW65258.1| Valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQKSFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|301643395|ref|ZP_07243445.1| valyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|301078225|gb|EFK93031.1| valyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|323945991|gb|EGB42029.1| valyl-tRNA synthetase [Escherichia coli H120]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|301024409|ref|ZP_07188095.1| valyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300396604|gb|EFJ80142.1| valyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|33593067|ref|NP_880711.1| leucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|48428535|sp|Q7VWY7|SYL_BORPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33563442|emb|CAE42323.1| leucyl-tRNA synthetase [Bordetella pertussis Tohama I]
          Length = 885

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   + +++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPKYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E  GY+ R++ Y ++LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPGYYLRITDYAEELLDQ 211

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             ++        R   E       GL+     R     G  I D   Y+     D 
Sbjct: 212 VSTNLPGWPERVRLMQENWIGKSEGLRFAFPHRIAGADGKLIQDGKLYVFTTRADT 267



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 67/327 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS S        +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCSCPRCGKPARRETDTMDTFVDSSWYFMRYTSPDNDQAMVDARNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILH--------------- 298
               H +Y   +         L+ + P  K      V +H +                  
Sbjct: 552 HAVLHLLYARFWTKVMRDLGLLNFDEPFTKLLCQGMVLNHIYSRKTPQGGIEYFWPEEVD 611

Query: 299 ----------------KGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                            G +        +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NVYDAKGAIVGAKLQRDGSEVNYGGVGTMSKSKNNGVDPQSLIDTLGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +   +   G++   N  L       +  +    +                 + +    
Sbjct: 672 PEQTLEWSDSGVEG-ANRFLRRLW--ALGYAQREAVGRGLATGADWAQAPAPVKELRREV 728

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +L++   + Q    +  ++  + +++ +D   DA  P       P   +       E 
Sbjct: 729 YGLLKQADYDYQRIQYNTVVSACMKMLNAID---DAPLP-----EGPAADAA----RAET 776

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +  L  +L   VP +   ++  L  A+
Sbjct: 777 LGLLLRVLYPVVPHITWHLWQDLGYAE 803


>gi|24115433|ref|NP_709943.1| valyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30065455|ref|NP_839626.1| valyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|81722731|sp|Q83IM5|SYV_SHIFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24054748|gb|AAN45650.1| valine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30043719|gb|AAP19438.1| valine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|281603543|gb|ADA76527.1| Valyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313646458|gb|EFS10920.1| valyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGANVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|15804850|ref|NP_290891.1| valyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15834489|ref|NP_313262.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|74314737|ref|YP_313156.1| valyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82546489|ref|YP_410436.1| valyl-tRNA synthetase [Shigella boydii Sb227]
 gi|168751049|ref|ZP_02776071.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168754838|ref|ZP_02779845.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168760511|ref|ZP_02785518.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168766547|ref|ZP_02791554.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168774022|ref|ZP_02799029.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168782783|ref|ZP_02807790.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168784906|ref|ZP_02809913.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168797836|ref|ZP_02822843.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|191167229|ref|ZP_03029047.1| valyl-tRNA synthetase [Escherichia coli B7A]
 gi|194437742|ref|ZP_03069837.1| valyl-tRNA synthetase [Escherichia coli 101-1]
 gi|195937283|ref|ZP_03082665.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208807261|ref|ZP_03249598.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812419|ref|ZP_03253748.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821133|ref|ZP_03261453.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209400172|ref|YP_002273802.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217326158|ref|ZP_03442242.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254796278|ref|YP_003081115.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256025194|ref|ZP_05439059.1| valyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260858410|ref|YP_003232301.1| valyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|261225377|ref|ZP_05939658.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255370|ref|ZP_05947903.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291285670|ref|YP_003502488.1| Valyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|300923935|ref|ZP_07139945.1| valyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301329236|ref|ZP_07222217.1| valyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|331671166|ref|ZP_08371999.1| valine--tRNA ligase [Escherichia coli TA271]
 gi|81765824|sp|Q8XCB3|SYV_ECO57 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|90108435|sp|Q31TK0|SYV_SHIBS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|90108437|sp|Q3YU91|SYV_SHISS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12519267|gb|AAG59457.1|AE005657_17 valine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13364713|dbj|BAB38658.1| valine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73858214|gb|AAZ90921.1| valine tRNA synthetase [Shigella sonnei Ss046]
 gi|81247900|gb|ABB68608.1| valine tRNA synthetase [Shigella boydii Sb227]
 gi|187770264|gb|EDU34108.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014833|gb|EDU52955.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999737|gb|EDU68723.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189357851|gb|EDU76270.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189364116|gb|EDU82535.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189368969|gb|EDU87385.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189374851|gb|EDU93267.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189379536|gb|EDU97952.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|190902682|gb|EDV62413.1| valyl-tRNA synthetase [Escherichia coli B7A]
 gi|194423238|gb|EDX39230.1| valyl-tRNA synthetase [Escherichia coli 101-1]
 gi|208727062|gb|EDZ76663.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733696|gb|EDZ82383.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741256|gb|EDZ88938.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209161572|gb|ACI39005.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209749478|gb|ACI73046.1| valine tRNA synthetase [Escherichia coli]
 gi|209749480|gb|ACI73047.1| valine tRNA synthetase [Escherichia coli]
 gi|209749482|gb|ACI73048.1| valine tRNA synthetase [Escherichia coli]
 gi|209749484|gb|ACI73049.1| valine tRNA synthetase [Escherichia coli]
 gi|209749486|gb|ACI73050.1| valine tRNA synthetase [Escherichia coli]
 gi|217322379|gb|EEC30803.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254595678|gb|ACT75039.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257757059|dbj|BAI28561.1| valyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|290765543|gb|ADD59504.1| Valyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|300419813|gb|EFK03124.1| valyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300844444|gb|EFK72204.1| valyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|320177614|gb|EFW52604.1| Valyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320184514|gb|EFW59316.1| Valyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320639015|gb|EFX08661.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644385|gb|EFX13450.1| valyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649702|gb|EFX18226.1| valyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320655099|gb|EFX23060.1| valyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660605|gb|EFX28066.1| valyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665532|gb|EFX32578.1| valyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323157534|gb|EFZ43643.1| valyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323171703|gb|EFZ57349.1| valyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323935380|gb|EGB31728.1| valyl-tRNA synthetase [Escherichia coli E1520]
 gi|323970488|gb|EGB65747.1| valyl-tRNA synthetase [Escherichia coli TA007]
 gi|326345409|gb|EGD69152.1| Valyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346735|gb|EGD70469.1| Valyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|331061755|gb|EGI33681.1| valine--tRNA ligase [Escherichia coli TA271]
 gi|332087225|gb|EGI92359.1| valyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|331656092|ref|ZP_08357080.1| valine--tRNA ligase [Escherichia coli M718]
 gi|331046446|gb|EGI18536.1| valine--tRNA ligase [Escherichia coli M718]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|300950214|ref|ZP_07164154.1| valyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300450435|gb|EFK14055.1| valyl-tRNA synthetase [Escherichia coli MS 116-1]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|218556805|ref|YP_002389719.1| valyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218707864|ref|YP_002415383.1| valyl-tRNA synthetase [Escherichia coli UMN026]
 gi|260847089|ref|YP_003224867.1| valyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|293402883|ref|ZP_06646980.1| valyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298378409|ref|ZP_06988293.1| valyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300899407|ref|ZP_07117662.1| valyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|307312967|ref|ZP_07592595.1| valyl-tRNA synthetase [Escherichia coli W]
 gi|331671399|ref|ZP_08372197.1| valine--tRNA ligase [Escherichia coli TA280]
 gi|218363574|emb|CAR01231.1| valyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218434961|emb|CAR15902.1| valyl-tRNA synthetase [Escherichia coli UMN026]
 gi|257762236|dbj|BAI33733.1| valyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|291429798|gb|EFF02812.1| valyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298280743|gb|EFI22244.1| valyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300356985|gb|EFJ72855.1| valyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|306907135|gb|EFN37642.1| valyl-tRNA synthetase [Escherichia coli W]
 gi|315063565|gb|ADT77892.1| valyl-tRNA synthetase [Escherichia coli W]
 gi|320200612|gb|EFW75198.1| Valyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323380355|gb|ADX52623.1| valyl-tRNA synthetase [Escherichia coli KO11]
 gi|323940176|gb|EGB36370.1| valyl-tRNA synthetase [Escherichia coli E482]
 gi|331071244|gb|EGI42601.1| valine--tRNA ligase [Escherichia coli TA280]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|147906|gb|AAA24657.1| valyl tRNA synthetase [Escherichia coli]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+D+                R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGAEAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|26251166|ref|NP_757206.1| valyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218702961|ref|YP_002410590.1| valyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227886688|ref|ZP_04004493.1| valyl-tRNA synthetase [Escherichia coli 83972]
 gi|300972383|ref|ZP_07171916.1| valyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050056|ref|ZP_07196968.1| valyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|81472723|sp|Q8FAD1|SYV_ECOL6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|26111598|gb|AAN83780.1|AE016771_291 Valyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218372947|emb|CAR20828.1| valyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227836261|gb|EEJ46727.1| valyl-tRNA synthetase [Escherichia coli 83972]
 gi|300298214|gb|EFJ54599.1| valyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300410962|gb|EFJ94500.1| valyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307556428|gb|ADN49203.1| valyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|315293631|gb|EFU52983.1| valyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|16132080|ref|NP_418679.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89110974|ref|AP_004754.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157163733|ref|YP_001461051.1| valyl-tRNA synthetase [Escherichia coli HS]
 gi|170083697|ref|YP_001733017.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683054|ref|YP_001746661.1| valyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188494411|ref|ZP_03001681.1| valyl-tRNA synthetase [Escherichia coli 53638]
 gi|209921755|ref|YP_002295839.1| valyl-tRNA synthetase [Escherichia coli SE11]
 gi|238903359|ref|YP_002929155.1| valyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254037280|ref|ZP_04871357.1| valyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|256019909|ref|ZP_05433774.1| valyl-tRNA synthetase [Shigella sp. D9]
 gi|300818517|ref|ZP_07098726.1| valyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300906105|ref|ZP_07123824.1| valyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301304691|ref|ZP_07210799.1| valyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|312965938|ref|ZP_07780164.1| valyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312973925|ref|ZP_07788096.1| valyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|2507438|sp|P07118|SYV_ECOLI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1790708|gb|AAC77215.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|85677005|dbj|BAE78255.1| valyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|157069413|gb|ABV08668.1| valyl-tRNA synthetase [Escherichia coli HS]
 gi|169891532|gb|ACB05239.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170520772|gb|ACB18950.1| valyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188489610|gb|EDU64713.1| valyl-tRNA synthetase [Escherichia coli 53638]
 gi|209915014|dbj|BAG80088.1| valyl-tRNA synthase [Escherichia coli SE11]
 gi|226840386|gb|EEH72388.1| valyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|238863779|gb|ACR65777.1| valyl-tRNA synthetase [Escherichia coli BW2952]
 gi|284924428|emb|CBG37553.1| valyl-tRNA synthetase [Escherichia coli 042]
 gi|300402048|gb|EFJ85586.1| valyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300528921|gb|EFK49983.1| valyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300840041|gb|EFK67801.1| valyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|309704762|emb|CBJ04113.1| valyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310331459|gb|EFP98715.1| valyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312289181|gb|EFR17075.1| valyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|315255615|gb|EFU35583.1| valyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|323181991|gb|EFZ67402.1| valyl-tRNA synthetase [Escherichia coli 1357]
 gi|323960299|gb|EGB55940.1| valyl-tRNA synthetase [Escherichia coli H489]
 gi|323975399|gb|EGB70500.1| valyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324019266|gb|EGB88485.1| valyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118819|gb|EGC12711.1| valyl-tRNA synthetase [Escherichia coli E1167]
 gi|332103402|gb|EGJ06748.1| valyl-tRNA synthetase [Shigella sp. D9]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|331007753|ref|ZP_08330877.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418437|gb|EGG92979.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 866

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y      YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLAMFPYPSGKLHMGHVRNYTITDVISRFQRMLGKNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++  + L   +D    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IQNNTAPAKWTYSNIDYMKEQLNSLGFGFDWNRELATCQPSYYKWEQWFFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G   +        V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVIDGKGWRSGAT----VERKEIPQWFIKITDYADELLTSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   ++           G
Sbjct: 207 DDLPDWPEQVKTMQRNWIGKSKG 229



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 27/197 (13%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N +DP   +   G D +R F +      +   +   G++         G    
Sbjct: 624 KMSKSKNNGVDPQTAVNLYGADTVRLFTMFAAPPTQTLEWSDSGVE---------GASRF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
           + R         +   P      + D   + +       + ++ ++    Q  + A+A V
Sbjct: 675 LRRLWKTTHGHIEAGTPAALNTEKLDQTQQDLRRKTHETIAKVTDDYAVRQQFNTAIAAV 734

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++EV R  D   P  L             V  E I     LL    P + + ++  L
Sbjct: 735 MELLNEVSRNADRSSPETLA------------VEREAIEAAIRLLTPVAPHIGHSLWLAL 782

Query: 478 FVADE--NRCFQSLDQR 492
              D   ++ +  +D+ 
Sbjct: 783 GHTDNIIDQPWPLVDEA 799


>gi|126179518|ref|YP_001047483.1| valyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862312|gb|ABN57501.1| valyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 863

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 135/410 (32%), Gaps = 29/410 (7%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE------EGYF 166
           +  + ++ +   + W         ++ + +              V W  E      E + 
Sbjct: 325 LKRQEELEQRVGTCWRCKTPIEILSERQWFVRVHQDEILESARRVSWTPEHMFARMENWA 384

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK----DLSLSRKTFDWGIKIPD 222
             +            + P  +       E++   +  L                G     
Sbjct: 385 NSMEWDWCISRQRIFATPIPVWFCTACGEMVIPAEKDLPIDPTVDKPKAPCPKCGGSDFT 444

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
               ++  W+D+  + L  TG+       K  F+PA +   G DI+R  A Y    A  L
Sbjct: 445 GETDVLDTWMDSSISVLHVTGWDGTG---KPPFFPAQIRPQGHDIIRTWAFYTILRAKAL 501

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  + + +   +   G K+SKS  N+I P  ++ + G DALR +     A G D  
Sbjct: 502 VGGHPWDEILVNGMVLGEDGFKMSKSRSNIISPEAIVGDYGADALRQWGAGGAATGSDIM 561

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++ + +     +     + N+    +  + K  D   P       +D  +L   S  + E
Sbjct: 562 FNWNDVVAA--SRFQTKLWNIFRFVMGHLEKGAD---PDAPVTELTDRWLLVRLSETVAE 616

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   M+     RAL  +         D Y +  K   L   +  RAS         +  L
Sbjct: 617 VTAAMEGYQFDRALRAIREFAWNTLADDYIEIVK-GRLYAADSSRASA-CSALRMTMDVL 674

Query: 459 AILLQAFVPKLANKIFDIL-FVADENRCFQSL----DQRLKPGFMLHKTF 503
             LL   +P  A + +  L   +     +       D+  + G +L KT 
Sbjct: 675 CRLLAPIIPHFAEECYHNLAGESVHKEAWPDFSYADDEARRHGDLLVKTV 724



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG      
Sbjct: 35  SSKPRFIIDTPPPYPTGNFHIGNALNWCYIDFIARYKRMRGYNVMFPQGWDCHGLPTEVK 94

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                  N    R     L  S D      T    ++   
Sbjct: 95  VEETYGITKNDVPREKFREMCRDLTLSNIEKMRATMRRLGFSTDWSHEYITMLPDYYRKT 154

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  + ++   GDIY+  +   +  R E      EV  
Sbjct: 155 QASFLQMLKAGDIYQSEHPVNFCTRCETAIAFAEVNY 191


>gi|304315496|ref|YP_003850643.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|9297121|sp|P26499|SYI_METTM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68525|pir||SYEXI isoleucine-tRNA ligase (EC 6.1.1.5) [validated] - Methanobacterium
           thermoautotrophicum (strain Marburg)
 gi|149728|gb|AAA72950.1| transfer RNA-Ile synthetase [Methanothermobacter
           thermautotrophicus]
 gi|302588955|gb|ADL59330.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 1045

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 71/404 (17%), Positives = 142/404 (35%), Gaps = 34/404 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE---EGYFFRLS 170
              G  ++      Y   ++ +    E+      +    Q  P  W  E     +     
Sbjct: 384 HRYGFCWRCKTPIIYLATEQWFLKITEIKDKMLSELDRVQWIP-SWAGESRFRNWIENAR 442

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS---------LSRKTF------- 214
            +      Y+       +  +  +  +      L++L+         + R          
Sbjct: 443 DWTISRQRYWGIPIPIWVCEDCDSIHVVGSIGELRELAVEGQLEGDFIHRPHVDRIILEC 502

Query: 215 -DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G ++   P  ++ VWID+         Y    +   ++++P D    G D     F+
Sbjct: 503 GRCGGRMKRTPD-VLDVWIDSGVAGWAALHYPREKE-LFSEWFPYDFITEGHDQTRGWFY 560

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +      +     P  + +     +  +G K+SKSLGNV++P +VIE+ G D LR++L+ 
Sbjct: 561 SQLGCGVIALDETPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLLW 620

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDES 389
                +D  +  D LK  VN          V  +  M L  +             + D  
Sbjct: 621 ANKPWEDLKFVWDELKN-VNKMFNILWNVYVFATTYMSLDRFQPGDHELEDLHFRDEDRW 679

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRAS 445
           I+S  + V  ++ E + N   HRA  ++   +       Y      + W +++ +PD+ +
Sbjct: 680 IISRVNSVALKVTEALDNLHFHRATREIHDFIVEDLSRWYIRLIRSRTW-IERDDPDKLA 738

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              +     ++ L + L    P +   I+  L    E    +S+
Sbjct: 739 A-YHSLYTALKTLIVTLSPIAPHVCEDIYQNLVRGAEPDSPESI 781



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 54/176 (30%), Gaps = 20/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E  +        Y + + H+G A+  I+ D   RF  + G +V    G D HG  I   
Sbjct: 37  EEGPRYSFLDGPPYCSGRIHLGTAWNKIMKDSYLRFKSMRGFNVRRQPGWDTHGLPIEHK 96

Query: 62  ------------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
                              +      + F  +N          L +   +DD   T +  
Sbjct: 97  VEGILGVRSKKDIEDKIGIEEFVRKCREFAMENKAVMTSQFQRLGVWMDWDDPYVTFDPA 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++C    K+  +K  + +      +  R E      E+              PV
Sbjct: 157 YMESCWWTLKRAHEKDLLLRDLRVITWCPRCETALALAEIDYHEKEDPSIYVKFPV 212


>gi|308069864|ref|YP_003871469.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA
           ligase) [Paenibacillus polymyxa E681]
 gi|305859143|gb|ADM70931.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA
           ligase) [Paenibacillus polymyxa E681]
          Length = 1029

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 84/457 (18%), Positives = 156/457 (34%), Gaps = 30/457 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +       V F    D  G  + +    AG   K       +    M     + Y     
Sbjct: 324 YRVCRENGVEFINVVDLQGNYVEEITDFAGRFVKDCDIDIVK----MLSEKGLLY----- 374

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS--LRDEAYYNDDEVYKGA----DGQYY 150
              K  ++       +       Y        +  ++D+   N+ EV        +G++ 
Sbjct: 375 --SKEKYEHSYPFCWRCDTPLLYYAMDSWFIKTTAIKDQLIANNSEVEWYPGHVREGRFG 432

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLS---YYESHPEFILPIERRNEVISFVKSGLKDL 207
                 V W      ++               +  H    L      +V + ++     +
Sbjct: 433 KFLEELVDWNISRDRYWGTPLNIWVCEETGEQFAPHSIAELRERAIGDVPADIELHKPYV 492

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              +     G         ++ VW D+ +       Y    + +  + +PAD+   G D 
Sbjct: 493 DDIKVRSQCGKYEMTRTPEVIDVWFDSGSMPFAQHHYPFENNETFEQQFPADMICEGIDQ 552

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+++   + +L+   P    + +   +  +G+K+SKS GNVIDP EVI+E G DA 
Sbjct: 553 TRGWFYSLLAVSTMLTGKAPYKAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAF 612

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ L+ + A      + K G+     + L + + N  + +   +  D DG  P    F  
Sbjct: 613 RWALLSDSAPWNSKRFSK-GIVGEAKSKLVDTLVN--THAFLTLYADIDGFDPAQHPFKP 669

Query: 386 S----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTN 440
           S    D  ILS  + ++  + + +       +   + S V E+ + Y    +        
Sbjct: 670 SAHKLDRWILSRLNSLILVVDKALAVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGL 729

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +          EV+   A LL  F P LA  I+  L
Sbjct: 730 TEDKLDAYRTLTEVLLTTAKLLAPFTPLLAEDIYLNL 766



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N +PHIGH    +I D + R+  + G  V+   G D HG  +   
Sbjct: 35  EGNPNFVFYEGPPTANGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELG 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            Q                       K  V +  + +RD+ + +      D+   T +  +
Sbjct: 95  VQKQLGISHKPEIEEYGVEKFIKKCKASVFEYEQQWRDLTEAIGYWTDLDNPYITLDNNY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   I +K  +Y+G     Y    +   +  EV +G  
Sbjct: 155 IESVWNILATIHEKDLLYRGHRVSPYCPDCQTTLSSHEVAQGYK 198


>gi|332083258|gb|EGI88489.1| valyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|33602351|ref|NP_889911.1| leucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|48428537|sp|Q7WH33|SYL_BORBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33576790|emb|CAE33869.1| leucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 885

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   + +++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPKYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E  GY+ R++ Y ++LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPGYYLRITDYAEELLDQ 211

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             ++        R   E       GL+     R     G  I D   Y+     D 
Sbjct: 212 VSTNLPGWPERVRLMQENWIGKSEGLRFAFPHRIAGADGKLIQDGKLYVFTTRADT 267



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 67/327 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS S        +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCSCPRCGKPARRETDTMDTFVDSSWYFMRYTSPDNDQAMVDARNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILH--------------- 298
               H +Y   +         L+ + P  K      V +H +                  
Sbjct: 552 HAVLHLLYARFWTKVMRDLGLLNFDEPFTKLLCQGMVLNHIYSRKTPQGGIEYFWPEEVD 611

Query: 299 ----------------KGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                            G +        +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NVYDAKGAIVGAKLQRDGSEVNYGGVGTMSKSKNNGVDPQSLIDTLGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +   +   G++   N  L       +  +    +                 + +    
Sbjct: 672 PEQTLEWSDSGVEG-ANRFLRRLW--ALGYAQREAVGRGLATGADWAQAPAPVKELRREV 728

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +L++   + Q    +  ++  + +++ +D   DA  P       P   +       E 
Sbjct: 729 YGLLKQADYDYQRIQYNTVVSACMKMLNAID---DAPLP-----EGPAADAA----RAET 776

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +  L  +L   VP +   ++  L  A+
Sbjct: 777 LGLLLRVLYPVVPHITWHLWQDLGYAE 803


>gi|90580734|ref|ZP_01236537.1| valyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438002|gb|EAS63190.1| valyl-tRNA synthetase [Vibrio angustum S14]
          Length = 953

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 79/444 (17%), Positives = 145/444 (32%), Gaps = 91/444 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEIKDHDLTIPYGDRGGVVIEPMLTDQWYVRAAPLAKPAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD-------------------------- 223
             N   ++++  ++D  +SR+   WG  I    D                          
Sbjct: 409 YENMYFAWMRD-IQDWCISRQ-LWWGHRIPAWYDNDGNVYVGRNEAEVREKHNLAPVVVL 466

Query: 224 --PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +      T G+ +N    +    P+D+ V G DI+ F         + 
Sbjct: 467 RQDDDVLDTWFSSALWTFGTQGWPENTADLQTFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNVIDPI++I+               
Sbjct: 526 FCKDEDGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVIDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAAKIEKATRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            + N  SR V M  +D D           + +D+ I S      +E   ++ N  +  A 
Sbjct: 644 KLWN-ASRYVLMNTEDQDCGFAAGSELDYSLADKWIESQFQLAAKEFNAHIDNFRLDMAA 702

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  KP  L K    +     +  + V+ +   L    +P +   
Sbjct: 703 GVLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRATRHTLITVLEKTLRLAHPVLPYITES 761

Query: 473 IFDIL-----FVADENRCFQSLDQ 491
           I+  +      V  E    Q+L Q
Sbjct: 762 IWQNVKPLVDGVDGETIMTQALPQ 785



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++  +  +Y+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYQEDLLYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|320174754|gb|EFW49883.1| Valyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|218561416|ref|YP_002394329.1| valyl-tRNA synthetase [Escherichia coli S88]
 gi|218368185|emb|CAR05993.1| valyl-tRNA synthetase [Escherichia coli S88]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|33596363|ref|NP_884006.1| leucyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|48428536|sp|Q7W9M4|SYL_BORPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33566132|emb|CAE37032.1| leucyl-tRNA synthetase [Bordetella parapertussis]
          Length = 885

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   + +++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPKYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E  GY+ R++ Y ++LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPGYYLRITDYAEELLDQ 211

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             ++        R   E       GL+     R     G  I D   Y+     D 
Sbjct: 212 VSTNLPGWPERVRLMQENWIGKSEGLRFAFPHRIAGADGKLIQDGKLYVFTTRADT 267



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 67/327 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS S        +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCSCPRCGKPARRETDTMDTFVDSSWYFMRYTSPDNDQAMVDARNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILH--------------- 298
               H +Y   +         L+ + P  K      V +H +                  
Sbjct: 552 HAVLHLLYARFWTKVMRDLSLLNFDEPFTKLLCQGMVLNHIYSRKTPQGGIEYFWPEEVD 611

Query: 299 ----------------KGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                            G +        +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NVYDAKGAIVGAKLQRDGSEVNYGGVGTMSKSKNNGVDPQSLIDTLGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +   +   G++   N  L       +  +    +                 + +    
Sbjct: 672 PEQTLEWSDSGVEG-ANRFLRRLW--ALGYAQREAVGRGLATGADWAQAPAPVKELRREV 728

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +L++   + Q    +  ++  + +++ +D   DA  P       P   +       E 
Sbjct: 729 YGLLKQADYDYQRIQYNTVVSACMKMLNAID---DAPLP-----EGPAADAA----RAET 776

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +  L  +L   VP +   ++  L  A+
Sbjct: 777 LGLLLRVLYPVVPHITWHLWQDLGYAE 803


>gi|225570109|ref|ZP_03779134.1| hypothetical protein CLOHYLEM_06205 [Clostridium hylemonae DSM
           15053]
 gi|225161579|gb|EEG74198.1| hypothetical protein CLOHYLEM_06205 [Clostridium hylemonae DSM
           15053]
          Length = 1111

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/465 (13%), Positives = 136/465 (29%), Gaps = 26/465 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV--FVDQNSRNFRDMADVLDI--SYDD 93
                 D+ F    DE G              K    V ++      + +      SY  
Sbjct: 402 KVGRKYDMPFVQLVDEKGNMGESTPYAGVFVKKADPLVLKDLEEQGLLFEAPKFEHSYPH 461

Query: 94  FIRTTEKRHHDTCRILWKKISDKGD----IYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             R      +      +  ++   D              S+    + +  E  +      
Sbjct: 462 CWRCDTPLIYYARESWFINMTAVKDDLIANNNTINWIPESIGKGRFGDWLENVQDWGISR 521

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 P+   E E                +       L     N              +
Sbjct: 522 NRYWGTPLNIWECEC------------GHQHSVGSIEELKSMSDNCPDDIELHRPYIDEV 569

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
           + K  + G ++   P+ ++  W D+         Y         K +PAD      D   
Sbjct: 570 TVKCPECGKEMHRVPE-VIDCWFDSGAMPFAQHHYPFENKELFEKQFPADFISEAVDQTR 628

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + L+    P    +         G+K+SKS GN +DP + +E+ G DA+R+
Sbjct: 629 GWFYSLLAISTLIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRW 688

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           +     A      +    + +     +           +   + ++D           + 
Sbjct: 689 YFYVNSAPWLPNRFHGKAVTEGQRKFMGTLWNTYAFFVLYANIDEFDATKYALEYDKLSV 748

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRA 444
            D+ +LS  + +++E+  +++N  I  A   +   V ++ + Y    +     K      
Sbjct: 749 MDKWLLSKMNTLVKEVDNDLENYRIPEAARALQDFVDDMSNWYVRRSRERFWAKGMEQDK 808

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                     +  +       +P +A  I+  L  + +    +S+
Sbjct: 809 INAYMTLYTALVTVCKAAAPMIPFMAEDIYQNLVRSIDKDAPESI 853



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 22/192 (11%)

Query: 1   MKEREK---LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           MKE++              N +PHIGH    +I D++ R+  + G +V    G D HG  
Sbjct: 94  MKEKDGNDIYMFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYEVPRKAGWDTHGLP 153

Query: 58  IAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTT 98
           +    +                       K  V +    + D ++ +      D+   T 
Sbjct: 154 VELEVEKLLGLDGKEQIEEYGLEPFIDKCKESVWKYKGMWEDFSNTVGFWADMDNPYVTY 213

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              + ++     K+I DKG +YKG     Y  R     +  EV +G       +     +
Sbjct: 214 HNDYIESEWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFK 273

Query: 159 WMEEEGYFFRLS 170
             +E+ Y    +
Sbjct: 274 VKDEDAYILAWT 285


>gi|213852378|ref|ZP_03381910.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 684

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 64/200 (32%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL---- 279
              ++++   Y   T          +K    + P D+++ G +    H +Y+  F     
Sbjct: 490 FDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMR 549

Query: 280 ---LSANLPLPKKVFSHGFIL--------------------------HKGE--------- 301
              +  +    K++   G +L                           KG          
Sbjct: 550 DAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAG 609

Query: 302 ---------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                    K+SKS  N IDP  ++E  G D +R F++          + + G++     
Sbjct: 610 HELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVE----- 664

Query: 353 DLANGIGNLVSRSVSMILKD 372
               G    + R   ++ + 
Sbjct: 665 ----GANRFIKRVWKLVYEH 680


>gi|289824523|ref|ZP_06544082.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 922

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIHKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|150020161|ref|YP_001305515.1| leucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|172048661|sp|A6LJM9|SYL_THEM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149792682|gb|ABR30130.1| leucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 823

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SDKKKFYNLVMFPYPSGTLHVGHVKNYVIGDIVARYKRMKGYNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  +V+  +N    R+    + ISYD    + T  + ++   + ++ K+ + G  
Sbjct: 89  AIKNKIHPEVWTFKNIDIIRNQIKKIGISYDWSREVITCTEEYYKWTQWIFLKLYENGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    +++V  G            V     E ++F+++ Y +KLL+ 
Sbjct: 149 YKKKAAVNWCPSCQTVLANEQVVDGK----CERCGTEVTMKHLEQWYFKITDYAEKLLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   +      +G
Sbjct: 205 IDKLRGWPENVKIMQKNWIGKSTG 228



 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 109/284 (38%), Gaps = 32/284 (11%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           L+ +        K   D              Y+         D     +W P D ++ G 
Sbjct: 477 LNTTCPKCGGPAKREADTMDTFVDSSWYYLRYINPKLEDKPFDTEDINYWMPVDQYIGGV 536

Query: 266 DILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y             L    P  + +F+ G I   G K+SKS GNV+ P E+I
Sbjct: 537 EHAVLHLLYSRFITKVLYDLGYLKFEEPF-ENLFTQGMIYKDGWKMSKSKGNVVSPDEMI 595

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDG 375
           E+ G D LR +++      KD  +   G+    R    L N I +++ R         D 
Sbjct: 596 EKYGADTLRTYILFMAPPEKDAEWSDAGIEGVNRFLKRLWNNIYSILPRI-------KDV 648

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPW 434
            +       + ++ +     + +++I E+++     + A+A ++ L + +  Y ++ K  
Sbjct: 649 KVEKIELKNKQEKDLRRKLHQSIKKITEDIEGGFKFNTAIAGLMELNNNLSEYLNSAKDL 708

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L             +  E++ +L ++L  F P +A +I+  L 
Sbjct: 709 NL------------PLLRELVEKLTLILSPFAPHMAEEIWHDLG 740


>gi|55980130|ref|YP_143427.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|55771543|dbj|BAD69984.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 878

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 5/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  GRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +  +N R  ++   ++ I   +D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGVHPKDWTYENIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   
Sbjct: 151 RAKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDL 207

Query: 181 ESHPEFILPIERRNEVISFVK 201
           E           +   I   +
Sbjct: 208 EGLNWPEKVKAMQRAWIGRSE 228



 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 29/210 (13%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKS GN +     ++E G D  R  ++       +  + ++G++         
Sbjct: 632 LWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQ--------- 682

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R    + +D + ++ T G F        D  +       L+++ E+++    +
Sbjct: 683 GAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFN 742

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++  ++ +  Y         +K  P     V  V    IR    +L  F P LA 
Sbjct: 743 TAIAALMEFLNALYEY---------RKDRP-----VTPVYRTAIRYYLQMLFPFAPHLAE 788

Query: 472 KIFDILFVAD-ENRCFQSLDQRLKPGFMLH 500
           +++   +        +  LD++     ++ 
Sbjct: 789 ELWHWFWPDSLFEAGWPELDEKALEKDVVE 818


>gi|293407978|ref|ZP_06651818.1| valyl-tRNA synthetase [Escherichia coli B354]
 gi|291472229|gb|EFF14711.1| valyl-tRNA synthetase [Escherichia coli B354]
          Length = 954

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 377 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 434

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 435 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 494

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 495 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 553

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 554 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 613

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 614 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 671 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 730 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 770



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 33  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 92

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 93  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 151 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 207


>gi|261492803|ref|ZP_05989350.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494831|ref|ZP_05991309.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309542|gb|EEY10767.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311485|gb|EEY12641.1| valine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 948

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 138/417 (33%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEQGNVYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 EQGQKMSKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 610 GTDALRFTLTALASNGRDINWDMKRLEG--YRNFCNKLWNASRYVLTNDKLDLSEGDV-- 665

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R  +           +     +   D Y +  KP   K 
Sbjct: 666 -EFSLADRWIESQFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKG 724

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
           T+  R        V V+ +L  L+   +P +  +I+      + +  +    Q   Q
Sbjct: 725 TDVQRRGA-SRTLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQ 780



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|323492966|ref|ZP_08098104.1| valyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312797|gb|EGA65923.1| valyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 952

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 125/382 (32%), Gaps = 58/382 (15%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRANNNLAPVVVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------ 282
             W  +      T G+ +N D  K    P+D+ V G DI+ F         +        
Sbjct: 474 DTWFSSALWTFGTQGWPENTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFCKDENG 532

Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAA 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R V M  ++ D         ++ +D+ I S      +E   ++ N  +  A   +   + 
Sbjct: 650 RYVLMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTIYEFIW 709

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--- 477
               D Y +  KP  L K N  +        + V+ +   L    +P +   I+  +   
Sbjct: 710 NQFCDWYLELTKP-VLWKGNEAQQRGTRRTLITVLEKTLRLAHPVIPYITETIWQSVKPL 768

Query: 478 --FVADENRCFQSLDQRLKPGF 497
              V  +    Q+L Q  +  F
Sbjct: 769 VEGVDGDTIMLQALPQYDEANF 790



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|297568453|ref|YP_003689797.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924368|gb|ADH85178.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 829

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y+     YP+ + H+GH     I DV+AR+ R+ G +V+   G D  G     AA
Sbjct: 34  SRKKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVIHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N    R     L +SY  D  + T + +++   ++ + K+ +KG  Y
Sbjct: 94  IKHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPKYYRWEQLFFLKMLNKGLAY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +    +    +++V  GA           V   + +G+F +++AY ++LL+  
Sbjct: 154 RKLTTVNWCETCQTVLANEQVINGA----CWRCDQAVTPRQMQGWFLKITAYAEELLAGC 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   +           +G
Sbjct: 210 DRLPGWPEKVLTMQRNWIGKSTG 232



 Score =  119 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 112/269 (41%), Gaps = 36/269 (13%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPK 288
           Y     +        A +W P D ++ G +    H +Y   F         LS + P   
Sbjct: 513 YTCPDSHDAPLHKPAADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLGYLSIDEPFT- 571

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + + G ++  G K+SKS GNV+DP E+IE+ G D +R F +      +D  ++  G++ 
Sbjct: 572 NLLTQGMVIKDGAKMSKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE- 630

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIREN 404
                   G    +SR    +L + + +       P    E+D ++     + ++++ ++
Sbjct: 631 --------GAFRFLSRIHRFVLDNREMLRAAGEELPADLGEADRTLHRKTHQTIRKVSQD 682

Query: 405 MQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + N    + A++ V+ L + +         + L     D+      V  + ++ +  LL 
Sbjct: 683 IDNSFQFNTAISAVMELSNTL---------FSLNAAQADK-QPQPAVNRQAVQTMLTLLF 732

Query: 464 AFVPKLANKIFDILFVAD--ENRCFQSLD 490
             VP L  ++++ L  A+  + + +   D
Sbjct: 733 PMVPHLCAELWEELGQAEALDRQGWPQFD 761


>gi|82779324|ref|YP_405673.1| valyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309784109|ref|ZP_07678751.1| valyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|90108436|sp|Q328S3|SYV_SHIDS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81243472|gb|ABB64182.1| valine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|308928102|gb|EFP73567.1| valyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 951

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P+ + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PSSVMVSGFDIIFFWIARMIMMTMHFIKDENGTPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTHHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|330827959|ref|YP_004390911.1| Valyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328803095|gb|AEB48294.1| Valyl-tRNA synthetase, putative [Aeromonas veronii B565]
          Length = 950

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 136/398 (34%), Gaps = 85/398 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R++      ++  E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVRVAPMAKTAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCVSRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDDAGNVYVGRSEDEVRAKHSIPSVTTLRQDEDVLDTWFSSALWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +N +  K    P D+ + G DI+ F         +           +P      +     
Sbjct: 491 NNTEALKTFH-PTDVLMSGFDIIFFWIARMIMMTMHFIKDENGQPQVPFKTVYITGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DP+++I+ +                                     
Sbjct: 550 EEGQKMSKSKGNVLDPLDMIDGISLEDLLEKRTGNMMQPQMAEKIAKRTAKQFPEGIDAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPT 379
           G DALR+ L    + G+D  +D   L    N    N + N  SR V M  +D D      
Sbjct: 610 GTDALRFTLAALASTGRDINWDMKRLDGYNN--FCNKLWN-ASRYVLMNTEDQDCGFNGG 666

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
              F+ +D  I S     +++ R  +       A   +   +     D Y +  KP  L 
Sbjct: 667 EMQFSLADRWIQSQLQVAIRDFRTALDTYRFDIAAGVLYEFIWNQFCDWYLELTKP-VLT 725

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           K +        +  V V+  L  L    +P +   I+ 
Sbjct: 726 KGSEAEQRAARHTLVTVLETLLRLAHPIIPFITETIWK 763



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  + D L R++R+ G + L+  GTD  G      
Sbjct: 30  TSKDSFCIMIPPPNVTGSLHMGHAFQQTLMDTLIRYNRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + D +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKEESGGTITRQMRRLGDSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 + ++ ++ + G +Y+G     +  +     +D EV       +      P+
Sbjct: 148 GLSAAVQEVFVRLYEDGLMYRGKRLVNWDPKLNTAISDLEVENREIKGHMWHLRYPL 204


>gi|189083241|sp|Q47IN0|SYL_DECAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 93/237 (39%), Gaps = 16/237 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RFH++ G +VL   G D  G     AA
Sbjct: 31  TKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHKMQGYNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    R     L   I ++    T    ++   + L+ ++ +KG +Y
Sbjct: 91  LQNNVPPAGWTYSNIDYMRQQLKSLGFAIDWEREFATCTPEYYRWEQWLFTRLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            ++  E   Y+ +++AY ++LLS  
Sbjct: 151 KKLGTVNWDPVDHTVLANEQVIDG----RGWRSGALIEKREIPMYYMKITAYAEELLSEL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++ P +   +    +      +G            +   + D+P   ++V+      
Sbjct: 207 DNLPGWPEQVRLMQKNWIGKSTG----------VRFAFPLADNPDEKLWVFTTRADT 253



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 115/355 (32%), Gaps = 40/355 (11%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSA-YQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
            + Q      +  +  +    FF  S  +         +              I     G
Sbjct: 479 YECQCPKCGGDARRETDTMDTFFESSWYFLRYACPDNTTAMVDERVAYWCKGGIDQYIGG 538

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVW--IDALTNYLT---TTGYLDNPDGSKAKFWPA 258
           ++   L      +  K+  D   I  +      L         T Y +   G K    PA
Sbjct: 539 IEHAILHLLYSRFFTKLMRDVGLIGDLGEPFANLLTQGMVVAPTFYRELDGGKKQWINPA 598

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           D+ V+  +  R       A L +  LP    V   G      EK+SKS  N +DP  +I+
Sbjct: 599 DVDVVTDERGRPTG----ATLKTDGLP----VVIGGT-----EKMSKSKNNGVDPQALID 645

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D  R F++      +   +   G++          +  L   +   +         
Sbjct: 646 QYGADTARLFIMFASPPDQSLEWSDAGVEGA-----YRFLRRLWKTTYDHLQAGLVAAST 700

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELK 437
           +    + +   +     + + ++ ++   +   + A+A V+ L++  D+  D        
Sbjct: 701 SNDGLSSAQADLRRKLHQTMGKVADDYGRRKQFNTAIAAVMELLNAYDK-CDL------- 752

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
           K    RA     +  E +  +A+LL   VP +   ++  L    +  N  F   D
Sbjct: 753 KDAAGRA-----LAQESLESIALLLFPIVPHIGQALYAQLRPGADAGNAAFPKAD 802


>gi|172039150|ref|YP_001805651.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710934|sp|B1WSK6|SYL_CYAA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171700604|gb|ACB53585.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 853

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     A
Sbjct: 30  SDKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  +    +  +N    +     L   I +D  + T    ++   + L+ +    G  
Sbjct: 90  AIDRNIPPADWTYKNIAQMKQQLQTLGLSIDWDREVATCSPDYYKWTQWLFLQFYQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ++G  + +    V+      +FF+++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV--DSEGYSWRSGAK-VERKLLRQWFFKITDYAEQLLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 207 LDKLTGWPDRVKLMQENWIGKSVG 230



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 79/182 (43%), Gaps = 30/182 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D   ++         G   
Sbjct: 614 EKMSKSKYNGVDPQKVLGKYGADTARMFILFKAPPEKDLEWDDADVE---------GQFR 664

Query: 361 LVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
            ++R   ++   +   G + +    ++ ++ +       ++EI E+++ +   + A++++
Sbjct: 665 FLNRVWRLVNGYEKKQGEVISNKELSKEEKDLRRAIHTAIKEISEDLEGDYQFNTAVSEL 724

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDI 476
           + L + ++                  A  +   V  E I  L ILL  F P +A +++  
Sbjct: 725 MKLSNALN-----------------DAKCINSEVYQEGIETLLILLAPFAPHIAEELWHN 767

Query: 477 LF 478
           L 
Sbjct: 768 LG 769


>gi|325095042|gb|EGC48352.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 964

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA
Sbjct: 62  GKEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N ++    +     +D  + T     +   + ++  +  +G  Y
Sbjct: 122 IERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSSEFYKHTQRIFLMLYQEGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKARVNYDPIDKTVLANEQVDANGCSWRSGAK---VEKLELKQWFFRITAFKEALLKDL 238

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ES     L       V+S  K  L   S +   F       +    +     D L
Sbjct: 239 ES-----LEAGWPERVLSMQKHWLGKSSGAHIKFLVSAPDDNYDIQVFTTRPDTL 288



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 20/234 (8%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + PL K   +        EK+SKS  N +DP   I   G DA+R  ++      +   +D
Sbjct: 651 DAPLIKN--TRTAPNISFEKMSKSKYNGVDPTTCINTYGSDAVRAHMLFSAPVSEVLEWD 708

Query: 343 KDGLK--KRVNADLAN-------GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           +  +   +R    L          +    S S        D  +P     ++ + +IL  
Sbjct: 709 ESKIVGMERWFNRLWRVVLDSRVSLEGFSSLSAESFKLMNDVRLPDLSTVSDDEATILLA 768

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTV 452
               +  +   +           + +++S++ ++ ++     L  T P   +  +LY+ +
Sbjct: 769 AHDTITSVSHCLDGMPYG-----LNTVISDLTKFTNSLASSSLPTTAPSPSSQAILYIAL 823

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
             + +L        P LA++ ++ L     N    S   R  P        DP+
Sbjct: 824 SSLLRLLA---PITPALASECWEHLHSPIRNSSTTSSPARTVPSIFSSPWPDPL 874


>gi|289191089|gb|ADC93657.1| aminoacyl tRNA synthetase AK-1 [synthetic construct]
          Length = 860

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 82/195 (42%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V + V       D       A TE+ +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWKLVYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKG 778

Query: 480 AD--ENRCFQSLDQR 492
               +N  +   D++
Sbjct: 779 EGDIDNAPWPVADEK 793


>gi|260450922|gb|ACX41344.1| valyl-tRNA synthetase [Escherichia coli DH1]
 gi|315138809|dbj|BAJ45968.1| valyl-tRNA synthetase [Escherichia coli DH1]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|194433888|ref|ZP_03066161.1| valyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417869|gb|EDX33965.1| valyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|332083726|gb|EGI88944.1| valyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|325920732|ref|ZP_08182638.1| leucyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548784|gb|EGD19732.1| leucyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 880

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +V+   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVMQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRGQLKSLGYAIDWSREFATCSPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/512 (13%), Positives = 148/512 (28%), Gaps = 98/512 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            G           H Q+  + A    +     V        D        + D+     +
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYALPIVQVVKLREPRNEDEQTWDATQWRDWYTDKSR 395

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                    +  +   G             + +   N      G   Q Y     PV + 
Sbjct: 396 ELELINSAEFDGLDFGGAFEALAERFERKGQGQRRVNYRLRDWGVSRQRYWGCPIPVIYC 455

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            + G           +L           PI+                       + G   
Sbjct: 456 AKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGPA 503

Query: 221 PDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP- 276
             +            + Y    T+    +    +A +W PADL+V G +    H +Y+  
Sbjct: 504 ERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFRF 561

Query: 277 -------AFLLSANLPLPKKV------------------------------------FSH 293
                  A L+ ++ P+   +                                     + 
Sbjct: 562 YHKLMRDARLVDSDEPVTNLLTQGMVIADTFYRDADNGGKDWINPADVEIQRDERGRVTG 621

Query: 294 GFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ G
Sbjct: 622 AVLVADGQPVHIGGTEKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAG 681

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIR 402
           +         +G+   + R    + K             A +   ++I       + ++ 
Sbjct: 682 V---------DGMARFMRRLWVQVHKHVGEGAAAALDVAALSAEQKAIRRKTHETIGKVS 732

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L + + ++ DA        ++  RA     V  E +  + +L
Sbjct: 733 DDYGRRHSFNTAIAAVMELSNALAKFDDA--------SDQGRA-----VRQEALEAMVLL 779

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   E+  F  +D
Sbjct: 780 LNPITPHASHALWQVLGRGETLLEDVAFPQVD 811


>gi|218551554|ref|YP_002385346.1| valyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218359096|emb|CAQ91757.1| valyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|167765115|ref|ZP_02437228.1| hypothetical protein BACSTE_03501 [Bacteroides stercoris ATCC
           43183]
 gi|167696743|gb|EDS13322.1| hypothetical protein BACSTE_03501 [Bacteroides stercoris ATCC
           43183]
          Length = 894

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 124/365 (33%), Gaps = 58/365 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YRNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 427 GHRIPAYFLPEGGYVVAATPEEALKLAQEKTGNPALKIEDLRQDEDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               + NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 487 LFDGILNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++I+  G D +R  ++     G D  +D    ++  N      
Sbjct: 547 KLGRKMSKSLGNSPDPLDLIDRYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             N +  +  ++   +    +P P A   +     S  + V  E+ +      +  AL  
Sbjct: 601 FNNKIWNAFRLVKGWEVSEEVPVPEAAELAMRWFESKQNAVAAELADLFGKYRLSEALMA 660

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P         V   T+ +   L  LL  F+P +  +
Sbjct: 661 VYKL------FWDEFSSWYLEMIKPAYGQPINKKVYDTTIGLFDNLLHLLHPFMPFITEE 714

Query: 473 IFDIL 477
           ++  +
Sbjct: 715 LWQHI 719



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|325917114|ref|ZP_08179347.1| leucyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536690|gb|EGD08453.1| leucyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 880

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +V+   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVMQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRGQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGL 234



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 110/320 (34%), Gaps = 82/320 (25%)

Query: 232 IDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA------ 282
               + Y    T+    +    +A +W PADL+V G +    H +Y+  +          
Sbjct: 513 FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFRFYHKLMRDARLV 572

Query: 283 --NLPLPKKV------------------------------------FSHGFILHKGE--- 301
             + P+   +                                     +   +L  G+   
Sbjct: 573 DSDEPVTNLLTQGMVIADTFYRDADNGGKDWINPADVEIQRDERGRVTGAVLLADGQSVH 632

Query: 302 -----KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADL 354
                K+SKS  N +DP  ++ + G D +R F +      +   +++ G+    R    L
Sbjct: 633 IGGTEKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGVDGMARFMRRL 692

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
              +   V    +++L           + +   ++I       + ++ ++   +   + A
Sbjct: 693 WVQVHKHVGEGAAVVL--------DAASLSAEQKAIRRKTHETIGKVSDDYGRRHSFNTA 744

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A V+ L + + ++ DA        ++  RA     V  E +  + +LL    P  ++ +
Sbjct: 745 IAAVMELSNALAKFDDA--------SDQGRA-----VRQEALEAMVLLLNPITPHASHAL 791

Query: 474 FDILFVAD---ENRCFQSLD 490
           + +L   +   E+  F   D
Sbjct: 792 WQVLGRGETLLEDVAFPQAD 811


>gi|300118071|ref|ZP_07055819.1| isoleucyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724382|gb|EFI65076.1| isoleucyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 525

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 9/248 (3%)

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSH 293
           T       Y         + +PAD+   G D     F+++   + L +  +P  + +   
Sbjct: 14  TMPFAQYHYPFENKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLG 73

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +  +G+K+SKS GN +DP++++ + G DALR+ L+ + A      + +  + +   + 
Sbjct: 74  HVLDEEGQKMSKSKGNALDPVDLVGKFGADALRWALLVDSAPWNAKRFSERTVLEAK-SK 132

Query: 354 LANGIGNLVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
             + + N+ S   +   L +Y+         T+ DE +LS      +++R  + +     
Sbjct: 133 FVDTLVNVYSFYVLYANLDEYNPNETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTN 192

Query: 413 ALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           A  ++ +LV EV + Y      + WE    N ++A+       +V+  ++ L+  F P +
Sbjct: 193 AAREIAALVDEVSNWYVRRSRNRFWE-SGMNAEKAAA-YETLHDVLVTISKLIAPFTPFV 250

Query: 470 ANKIFDIL 477
           A  I   L
Sbjct: 251 AEDIHLNL 258


>gi|71906184|ref|YP_283771.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|71845805|gb|AAZ45301.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 876

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 93/237 (39%), Gaps = 16/237 (6%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RFH++ G +VL   G D  G     AA
Sbjct: 37  TKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFHKMQGYNVLQPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    R     L   I ++    T    ++   + L+ ++ +KG +Y
Sbjct: 97  LQNNVPPAGWTYSNIDYMRQQLKSLGFAIDWEREFATCTPEYYRWEQWLFTRLYEKGLVY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D     +++V  G            ++  E   Y+ +++AY ++LLS  
Sbjct: 157 KKLGTVNWDPVDHTVLANEQVIDG----RGWRSGALIEKREIPMYYMKITAYAEELLSEL 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++ P +   +    +      +G            +   + D+P   ++V+      
Sbjct: 213 DNLPGWPEQVRLMQKNWIGKSTG----------VRFAFPLADNPDEKLWVFTTRADT 259



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 115/355 (32%), Gaps = 40/355 (11%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSA-YQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
            + Q      +  +  +    FF  S  +         +              I     G
Sbjct: 485 YECQCPKCGGDARRETDTMDTFFESSWYFLRYACPDNTTAMVDERVAYWCKGGIDQYIGG 544

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVW--IDALTNYLT---TTGYLDNPDGSKAKFWPA 258
           ++   L      +  K+  D   I  +      L         T Y +   G K    PA
Sbjct: 545 IEHAILHLLYSRFFTKLMRDVGLIGDLGEPFANLLTQGMVVAPTFYRELDGGKKQWINPA 604

Query: 259 DLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           D+ V+  +  R       A L +  LP    V   G      EK+SKS  N +DP  +I+
Sbjct: 605 DVDVVTDERGRPTG----ATLKTDGLP----VVIGGT-----EKMSKSKNNGVDPQALID 651

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D  R F++      +   +   G++          +  L   +   +         
Sbjct: 652 QYGADTARLFIMFASPPDQSLEWSDAGVEGA-----YRFLRRLWKTTYDHLQAGLVAAST 706

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELK 437
           +    + +   +     + + ++ ++   +   + A+A V+ L++  D+  D        
Sbjct: 707 SNDGLSSAQADLRRKLHQTMGKVADDYGRRKQFNTAIAAVMELLNAYDK-CDL------- 758

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
           K    RA     +  E +  +A+LL   VP +   ++  L    +  N  F   D
Sbjct: 759 KDAAGRA-----LAQESLESIALLLFPIVPHIGQALYAQLRPGADAGNAAFPKAD 808


>gi|289191087|gb|ADC93656.1| aminoacyl tRNA synthetase AK-2 [synthetic construct]
          Length = 860

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++   +L   YD    + T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL+ 
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 82/195 (42%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          + + G++       AN    
Sbjct: 618 SKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLK 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V + V       D       A TE+ +++     + + ++ +++  +   + A+A ++ 
Sbjct: 672 RVWKLVYEHTAKGDVAALNVDALTENQKALRRNVHKTIAKVTDDIGRRQTFNTAIAAIME 731

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++     A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L  
Sbjct: 732 LMNKL-----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKG 778

Query: 480 AD--ENRCFQSLDQR 492
               +N  +   D++
Sbjct: 779 EGDIDNAPWPVADEK 793


>gi|84489310|ref|YP_447542.1| valyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372629|gb|ABC56899.1| ValS [Methanosphaera stadtmanae DSM 3091]
          Length = 879

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 84/440 (19%), Positives = 151/440 (34%), Gaps = 31/440 (7%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            ++      DE G+ +  A + AG+T K        + ++ + ++           ++  
Sbjct: 287 YNLDIINAIDEKGEMLPVAGKYAGMTIKECRSSIIEDLKEESYLIK----------QEDV 336

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                + W+  +    + K  +    +  +E      +  +   G  Y    N    M+ 
Sbjct: 337 DQNVGLCWRCKTPIEIMTKKQWFVAANKMNEDIVEQAKSMRWVPGHMYQRLENWAHSMDW 396

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           +    R   +   +  +Y      ++        +         +     +   G     
Sbjct: 397 DWCISRQRIFATPIPVWYCDDCHKVVLPSVEQLPVDP------TIDKPDHSCSCGCNSFT 450

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
             + ++  W+D+    LT   + +         +PA L   G DI+R  A Y     + L
Sbjct: 451 PEEDVLDTWMDSSITPLTIANWPNEGW---ENVYPATLRPQGHDIIRTWAFYTILRCYAL 507

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P  + V +       G K+SKSLGNVI P EVIEE G DALR +       G D  
Sbjct: 508 TGEKPFDEIVVNGMVFGEDGHKMSKSLGNVIAPEEVIEEYGADALRLW-SANSVPGADVP 566

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +    +K            N   R +SM L   + +          D+ ILS  +R+ Q 
Sbjct: 567 FGWKDIK--HAYKFLRKFWN-AFRFISMHLD--ENVSDNLSENNIIDKWILSKLNRLNQT 621

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + +  +      A   +   V     D Y +A K + L   + D  +   Y    VI   
Sbjct: 622 VTQAFEEYNFATAEQAIYDFVWHDFCDEYIEAVK-YRLY-EDIDSTNDAKYTLKTVIETT 679

Query: 459 AILLQAFVPKLANKIFDILF 478
             L+    P  A+ +   L 
Sbjct: 680 LALMAPITPFFADTVNQYLG 699



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 15/159 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I T   YP  + H+GH    +  D++AR+ R++  DVLF  G D HG       
Sbjct: 35  TKPTYIIDTPPPYPTGKLHMGHVLNWVYMDIIARYKRMNNFDVLFPQGWDCHGLPTEVKV 94

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
           +      K                 +N    R     +  S  +D    T    +    +
Sbjct: 95  EEIHNIKKNDVSRETFRDYCIDLTHENIEKMRLQMRKMGYSQDWDHEYITMLPENKKRTQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + + K+ ++  IY+  +   +  R E      EV    +
Sbjct: 155 LSFLKLYNQDMIYQDIHPINWCPRCETAIAFAEVEYSDN 193


>gi|219850836|ref|YP_002465268.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545095|gb|ACL15545.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 1060

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 76/439 (17%), Positives = 141/439 (32%), Gaps = 72/439 (16%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G   +           +    + EV       +      P+ +   E +F ++   ++++
Sbjct: 363 GLPVREANGQVLEALGDHLLAEQEVVHRY--GHCWRCKTPIIFRATEQWFLKIVQVKEQM 420

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI---------------- 220
           L           P    +   +      +D  +SR+   WGI I                
Sbjct: 421 LEEI--KQVTWYPDWAGSARFADWVGEARDWCISRQR-YWGIPIPVWQCNSCRKRRVIGT 477

Query: 221 --------------------------------PDDPQYIMYVWIDALTNYLTTTGYLDNP 248
                                               + I  VW D+      T  +    
Sbjct: 478 IHELEEAGGVPVPNPHRPYVDQITIPCECGGAMHRVKDIFDVWFDSAVASWATLDFPAEH 537

Query: 249 DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D    + WPADL + G+D     F++    +       P  + +     +    +K+SKS
Sbjct: 538 DQ-FDRLWPADLIIEGQDQTRGWFYSQLGASTCAFDKAPYKRVLMHGFALDADSKKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-S 365
           LGN+I P EV+ + GVD LR++++   A   D  ++ DG+K        N + N+     
Sbjct: 597 LGNMITPEEVVAKYGVDVLRFYVLSANAPWDDLKFNWDGVKTVHRT--INVLWNVYRFPL 654

Query: 366 VSMILKDY-----------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             M L  +           + +     A    D  I+S  + +   + + M    +HRA 
Sbjct: 655 TYMSLDGFVPESNEEIWNGEYITRRYAAMPSEDRWIISTVNSLAVTVTQAMNECTLHRAT 714

Query: 415 AQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             ++S +       Y    +P    +               V+R+L +L+  F P +A  
Sbjct: 715 RAILSFILEDLSRWYVQLVRPRMWLEGEDQGKQDAYETMYYVMRKLLVLIAPFAPHIAET 774

Query: 473 IFDILFVADENRCFQSLDQ 491
            +  L    +      LD 
Sbjct: 775 CYQNLKQQGDPESVHMLDW 793



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 19/178 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              +      Y     H+G A+  II D L RFHR+ G +V+   G D HG  I    + 
Sbjct: 39  RPFFFVDGPPYTTGHIHLGTAWNKIIKDSLLRFHRMTGRNVIARAGYDMHGLPIEVQVEK 98

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + F + N          L I   +D+  +T +  + + 
Sbjct: 99  KLGFVSKKDIEQFGIERFIEECRSFAETNRDVMSAQFKKLGIWMDFDNPYQTLKPSYIEA 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++   +G +  G     +  R      D EV    +         PV   E E
Sbjct: 159 AWWALQQADKRGMLEIGHRVVNWCPRCGTAIADAEVEYWDEHDPSVFVKFPVTGKEHE 216


>gi|309792899|ref|ZP_07687327.1| valyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|308123185|gb|EFO60447.1| valyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   +S     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVKSGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|300928083|ref|ZP_07143631.1| valyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300463880|gb|EFK27373.1| valyl-tRNA synthetase [Escherichia coli MS 187-1]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTDAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|254362283|ref|ZP_04978396.1| valine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093860|gb|EDN74792.1| valine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 954

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 138/417 (33%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEQGNVYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLTALASNGRDINWDMKRLEG--YRNFCNKLWNASRYVLTNDKLDLSEGDV-- 671

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R  +           +     +   D Y +  KP   K 
Sbjct: 672 -EFSLADRWIESQFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
           T+  R        V V+ +L  L+   +P +  +I+      + +  +    Q   Q
Sbjct: 731 TDVQRRGA-SRTLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQ 786



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|254507457|ref|ZP_05119592.1| valyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549713|gb|EED26703.1| valyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 957

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/387 (18%), Positives = 126/387 (32%), Gaps = 63/387 (16%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRANNNLAPVVVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------ 282
             W  +      T G+ +N D  K    P+D+ V G DI+ F         +        
Sbjct: 474 DTWFSSALWTFGTQGWPENTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFCKDENG 532

Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAA 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           R V M  +D D    +         ++ +D+ I S      +E   ++ N  +  A   +
Sbjct: 650 RYVLMNTEDQDCGFHSSNEQAGEIEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTI 709

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP  L K +  +        + V+ +   L    +P +   I+ 
Sbjct: 710 YEFIWNQFCDWYLELTKP-VLWKGSEAQQRGTRRTLITVLEKTLRLAHPVIPYITETIWQ 768

Query: 476 IL-----FVADENRCFQSLDQRLKPGF 497
            +      V  +    Q+L Q  +  F
Sbjct: 769 SVKPLVDGVEGDTIMLQALPQFDEANF 795



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|295097701|emb|CBK86791.1| valyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGSIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNEGNVYVGRTEEEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIESHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAFRDALDSYRFDIAAGILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           + V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRNTLITVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|288802534|ref|ZP_06407973.1| valine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288335062|gb|EFC73498.1| valine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 897

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 78/420 (18%), Positives = 141/420 (33%), Gaps = 63/420 (15%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    H P++      +F ++  + D  LS          P + +N 
Sbjct: 348 LMEKVEDYDNKVGYSERTHVPIEPKLSTQWFLKMQHFADIALSPVMDDDIEFYPKKYKNT 407

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 408 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFKDAEGKNATVVAETTEEALKLAQEINPSVT 465

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIY 274
               +     M  W  +    ++    ++NPD  +   ++P    V G DI+ F    + 
Sbjct: 466 AADLEQESDCMDTWFSSWLWPISVFDGINNPDNEEINYYYPTSDLVTGPDIIFFWVARMI 525

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              +      P     F+       G K+SKSLGN  DPI +IE+ G D +R  ++    
Sbjct: 526 MAGYEYRGKFPFKHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAP 585

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +D+   ++  N        N +  +  ++          P A   + E   +  
Sbjct: 586 AGNDILFDETLCEQGRN------FNNKIWNAFRLVQGWETTDAEQPLANKIAVEWFEAKL 639

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             V  E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  +T E 
Sbjct: 640 KEVNAEMNEQFKSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDKLTYEA 693

Query: 455 ----IRQLAILLQAFVPKLANKIFDILFVADEN----RCFQSLDQRLKPGFMLHKTFDPI 506
                  L  +L  F+P +  +++  ++   +N    R    LD   K    L +  + +
Sbjct: 694 TLKFFNSLLKMLHPFMPFITEELWQHIYERKDNESIMRDELKLDAPSKEELKLIEAIEQV 753



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T +     
Sbjct: 92  VNRLAEQGVKKTDLTREQFLEHAWDWTHEHGGIILKQLRRLGCSCDWDRTAFTMDDTRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  +  KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYKKGYIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|255020894|ref|ZP_05292950.1| Valyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969685|gb|EET27191.1| Valyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 938

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 122/396 (30%), Gaps = 84/396 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++ R++   +  ++  E+     +P     +        ++D  +SR+   W
Sbjct: 363 IEPFLTDQWYVRVAPLAEPAIAAVETGRLRFVPENWT-KTYFDWMHRIQDWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     TT G+
Sbjct: 421 GHQIPAWYGPDGQVFVARDEATAAAEAQRHYGMTVPLERDPDVLDTWFSSALWPFTTLGW 480

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    +F+P  + V G DI+ F    +          +P  +          +G+K
Sbjct: 481 PARTP-ELQEFYPTSVLVTGFDIIFFWVARMVMMGLRFMDEVPFREVYVHGLVRDGEGQK 539

Query: 303 ISKSLGNVIDPIEVIEE-------------------------------------VGVDAL 325
           +SKS GNV+DP+++++                                       G DAL
Sbjct: 540 MSKSKGNVLDPLDLMDGIDLEALVAKRTQGLLQPHMAQKIEQATRKEFPQGIPAYGTDAL 599

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R+ L      G+D  +D   ++   N    N I N  +R  +M ++  D +         
Sbjct: 600 RFTLASLATQGRDIRFDLKRVEGSRN--FCNKIWN-AARFATMQVEHVDDLEG-ESELLA 655

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-- 441
            +  I+         + + +       A   +         D Y +  KP  L+      
Sbjct: 656 PERWIIGRLQETEAAVNDAIDQYRFADAAQALYQFFWNDYCDWYIELAKP-ALRGEGDFT 714

Query: 442 -DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +        + V+     LL  F+P +   ++  
Sbjct: 715 VAQQRGSRRTLLRVLEAGLRLLHPFMPFITETLWQR 750



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK------- 60
              +  PN     H+GHA++  + DVL R HR+ G  VL+  GTD  G            
Sbjct: 38  CIMLPPPNVTGTLHMGHAFQDTLMDVLVRTHRMRGERVLWQPGTDHAGIATQMLVERQLQ 97

Query: 61  ------------AAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                       A        +    D+     R +    D S   F  T +    +   
Sbjct: 98  REGLERREMGRTAFLERVWRWREASGDRIVHQIRRLGSSCDWSRQRF--TLDSGLSEAVT 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ ++G IY+G     +    +   +D EV    +         P+
Sbjct: 156 EVFVRLYEQGLIYRGKRLVNWDPVLQTAVSDLEVLSEEEMGKLWHIRYPL 205


>gi|323487128|ref|ZP_08092435.1| hypothetical protein HMPREF9474_04186 [Clostridium symbiosum
           WAL-14163]
 gi|323694634|ref|ZP_08108799.1| isoleucine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323399531|gb|EGA91922.1| hypothetical protein HMPREF9474_04186 [Clostridium symbiosum
           WAL-14163]
 gi|323501298|gb|EGB17195.1| isoleucine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 1046

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/404 (12%), Positives = 124/404 (30%), Gaps = 13/404 (3%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
           +      +    W+  +      +  +    +   E    ++            G++ + 
Sbjct: 384 SAPVFEHSYPHCWRCDTPLIYYARESWFIQMTAVKEDLIRNNNTINWIPESIGKGRFGDW 443

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N             S++
Sbjct: 444 LENVQDWGISRNRYWGTPLNIWECECGCQHSIGSIEELKSMSDNCPDDIELHRPYIDSVT 503

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
               + G ++   P+ ++  W D+         Y         + +PAD      D    
Sbjct: 504 ITCPECGKEMHRVPE-VIDCWFDSGAMPFAQHHYPFENKDLFEQQFPADFISEAVDQTRG 562

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L+    P    +         G+K+SKS GN +DP + +E  G DA+R++
Sbjct: 563 WFYSLLAISTLIFNKAPYKNVIVMGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTES 386
                A      +    + +     +           +   + ++D              
Sbjct: 623 FYVNSAPWLPNRFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDNFDATEYKLEYDKLPVM 682

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++E+ +++ N  I  A   +   V ++ + Y    +     K       
Sbjct: 683 DKWLLSKLNTLVKEVDDDLANYRIPEAARALQDFVDDMSNWYVRRSRERFWAKGMEQDKI 742

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  +       VP +   I+  L    +    +S+
Sbjct: 743 NAYMTLYTALVTVCKAAAPMVPFMTEDIYQNLVRKIDKDAPESI 786



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            + +                     K  V +    + D +  +      +D   T    +
Sbjct: 96  VEKSLGLDGKEQIEGYGLEPFIEHCKESVWKYKGMWEDFSSTVGFWADMEDPYVTYHNEY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     KKI D+G +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 156 IESEWWALKKIWDRGLLYKGFKIVPYCPRCGTPLSSHEVAQGYKDVKERSAIVKFKLKDE 215

Query: 163 EGYFFRLS 170
           EG+    +
Sbjct: 216 EGFVLAWT 223


>gi|264680698|ref|YP_003280608.1| hypothetical protein CtCNB1_4567 [Comamonas testosteroni CNB-2]
 gi|262211215|gb|ACY35313.1| hypothetical protein CtCNB1_4567 [Comamonas testosteroni CNB-2]
          Length = 902

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 86/219 (39%), Gaps = 6/219 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     AA
Sbjct: 31  SKPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNKVPPAKWTYENIAYMKKQMQAMGLAIDWSREVATCDPEYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+  ++ Y  +LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLGITHYAQELLDHV 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +   E        ++V    ++ +   +  R  F   ++
Sbjct: 207 QVGNEKATLNGWPDKVRLMQENWIGKSAGVRFAFTHEVR 245



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 114/345 (33%), Gaps = 28/345 (8%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++        ++  + +         +     G++ 
Sbjct: 494 GVVCPCCGKPARRETDTMDTFVDSSWYFMRYCDAKNGEQMVADGADYWMPMDQYIGGVEH 553

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +   +K     FWP D+  
Sbjct: 554 AILHLLYARFWTKVMRDLGLVKIDEPFTKLLTQGMVLNHIYSRRTAKGAKEYFWPKDVEH 613

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVG 321
           +  D  +         + SA+  LP        I ++G   +SKS  N +DP ++IE+ G
Sbjct: 614 VFDDSGKIIGAKLKIEVDSADGLLP----VGTAIDYEGVGTMSKSKNNGVDPQDLIEKYG 669

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-----YDGM 376
            D  R + +          ++   ++          + N  S+   M +           
Sbjct: 670 ADTARLYTMFTSPPELTLEWNDAAVEGSYR--FLRRVYNFGSKLTGMDMASAVQGVAGAK 727

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                 F ++ +++      VL+++  +      +  ++  + +++ +          E 
Sbjct: 728 SLDDVEFGKAAKALRLEIHNVLKQVEYDYSRMQYNTVVSGAMKMINAL----------ED 777

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K   D  + V    +E    L  +L    P LA+ ++  L  A+
Sbjct: 778 FKALDDAGAKV--ALIEGFGILLRVLYPATPHLAHVLWSELGYAN 820


>gi|164658017|ref|XP_001730134.1| hypothetical protein MGL_2516 [Malassezia globosa CBS 7966]
 gi|159104029|gb|EDP42920.1| hypothetical protein MGL_2516 [Malassezia globosa CBS 7966]
          Length = 1080

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 136/432 (31%), Gaps = 51/432 (11%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ---WME--EEGYFF 167
               GD+ +      + +  +            +        +  +   WME  ++    
Sbjct: 479 CERSGDVIEPVMKPQWWVNCQPLAKAAVEKVRQEDMAIEPPQSKREFFRWMENIQDWCVS 538

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
           R   +  ++ +Y+                +        D   ++       ++  D   +
Sbjct: 539 RQLWWGHRVPAYFVDMEGVEQDASEGRWWVVGRTREQADERAAKMANGRAYELKQDED-V 597

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     +T G+          ++P  +   G DIL F    +       +  LP
Sbjct: 598 LDTWFSSGLWPFSTLGWPRANTDDMKYYYPTSMLETGWDILFFWVARMIMLGVYHTGQLP 657

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG----- 339
             K+VF H  +    G K+SKSLGNVIDPI+VIE + ++ L+  L       K+      
Sbjct: 658 F-KEVFCHAMVRDAHGRKMSKSLGNVIDPIDVIEGISLEGLQQRLREGNLDEKEINKAAQ 716

Query: 340 ------------------------------FYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                                           + D ++        N + N    ++  +
Sbjct: 717 GQKKDYPRGIPQCGTDALRFTLCAYTAAGRDINLDIMRVEGYRKFCNKLWNATRFALLKL 776

Query: 370 LKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
              Y  +           +  ++ IL   +   +++  +MQ +    A + V +      
Sbjct: 777 QDGYTPLPLAEQDAFVPQSLVEKWILYRLNATAKQLDHDMQQRSFMSATSCVYNFWLYDL 836

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +A KP       P    +  +     +     LL  F+P +  +++  L V  + 
Sbjct: 837 CDVYIEAIKPITDAGAEPAARLSAQHTLYACLDAGLKLLHPFMPFVTEELWHRLPVRPQE 896

Query: 484 RCFQSLDQRLKP 495
            C      R  P
Sbjct: 897 TCETIAHTRFPP 908



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 21/145 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           HIGHA  + I D L RF+R+ G   L+  G D  G       + 
Sbjct: 149 KTFVIPLPPPNVTGLLHIGHALTISIQDALIRFYRMKGYRTLYVPGFDHAGISTQTVVEK 208

Query: 65  AGVTTKV-----------------FVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHD 104
                +                  + D+      +    L  S+D F R   T +    +
Sbjct: 209 RLAKVEQKSRYDYGREAFLQKVFDWKDEYQARISNQMRRLGASFD-FTREAFTMDASLSE 267

Query: 105 TCRILWKKISDKGDIYKGCYSGWYS 129
                + K+ + G +Y+      + 
Sbjct: 268 AVTENFCKLFEDGILYRENRLVNWC 292


>gi|302346416|ref|YP_003814714.1| valine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302151007|gb|ADK97268.1| valine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 897

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 78/420 (18%), Positives = 141/420 (33%), Gaps = 63/420 (15%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    H P++      +F ++  + D  LS          P + +N 
Sbjct: 348 LMEKVEDYDNKVGYSERTHVPIEPKLSTQWFLKMQHFADIALSPVMDDDIEFYPKKYKNT 407

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 408 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFKDAEGKNATVVAETTEEALKLAQEINPSVT 465

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIY 274
               +     M  W  +    ++    ++NPD  +   ++P    V G DI+ F    + 
Sbjct: 466 AADLEQESDCMDTWFSSWLWPISVFDGINNPDNEEINYYYPTSDLVTGPDIIFFWVARMI 525

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              +      P     F+       G K+SKSLGN  DPI +IE+ G D +R  ++    
Sbjct: 526 MAGYEYRGKFPFKHVYFTGIVRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAP 585

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +D+   ++  N        N +  +  ++          P A   + E   +  
Sbjct: 586 AGNDILFDETLCEQGRN------FNNKIWNAFRLVQGWETTDAEQPLANKIAVEWFEAKL 639

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             V  E+ E  ++  I  AL  V  L      ++D    W L+   P+    +  +T E 
Sbjct: 640 KEVNAEMNEQFKSYRISEALMTVYRL------FWDEFSSWYLEMIKPEYGKPIDKLTYEA 693

Query: 455 ----IRQLAILLQAFVPKLANKIFDILFVADEN----RCFQSLDQRLKPGFMLHKTFDPI 506
                  L  +L  F+P +  +++  ++   +N    R    LD   K    L +  + +
Sbjct: 694 TLKFFNSLLKMLHPFMPFITEELWQHIYERKDNESIMRDELKLDAPSKEELKLIEAIEQV 753



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T +     
Sbjct: 92  VNRLAEQGVKKTDLTREQFLEHAWDWTHEHGGIILKQLRRLGCSCDWDRTAFTMDDTRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  +  KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYKKGYIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|296533435|ref|ZP_06896019.1| leucine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296266241|gb|EFH12282.1| leucine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 860

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 38  SKPKYYVLEMFPYPSGKIHMGHVRNYTLGDVVARYKRARGFQVLHPMGWDAFGLPAENAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  G     +  QN  N R     + +S  +D    T +  ++   + L+ +    G + 
Sbjct: 98  RERGTHPAAWTYQNIANMRAELKRMGLSIEWDREFATCDPAYYGQQQKLFLQFLKGGLVE 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G           PV+  +   +FF ++ +  +LL   
Sbjct: 158 RKESWVNWDPVDHTVLANEQVIDG----RGWRSGAPVEKKKLSQWFFSITKFAPQLLEAL 213

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 214 DGLDRWPERVKLMQANWIGRSEG 236



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 67/179 (37%), Gaps = 24/179 (13%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           + +K+SKS  N IDP  +I+  G D  R+F++ +    +D  + + G+     +     +
Sbjct: 622 RNDKMSKSKRNTIDPGAIIDHYGADTARWFILSDNPPERDMEWTESGV--SGASRFTQRL 679

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             LV+ +   +        P       +   +     R +  + E ++    + A+A++ 
Sbjct: 680 WRLVNGAAGTLPA------PGTEPAEGAARDLRRATHRTIAAVTEALETFSFNVAVARIH 733

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + +                            E +  +A L+   +P LA +++ +L
Sbjct: 734 EFANAI----------------EAAGEADGAARREALEAVARLVSPMMPHLAEELWSLL 776


>gi|327354732|gb|EGE83589.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 966

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA
Sbjct: 62  GKEKAYVLSMFPYPSGALHMGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N ++    +     +D  + T     +   + ++  + +KG  Y
Sbjct: 122 IERGIDPARWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIFLMLYEKGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKALVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKVELKQWFFRITAFKEALLKDL 238

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +S     L       V+S  +  L     ++  F       +    +     D L
Sbjct: 239 DS-----LAAGWPERVLSMQRHWLGKSFGAQIKFLVSAPDDNYDIQVFTTRPDTL 288



 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 20/200 (10%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP   I+  G DA+R  ++      +   +D+  +   +R    L
Sbjct: 663 NVSFEKMSKSKYNGVDPTTCIDTYGSDAVRAHILFSAPVSEVLEWDESKIVGMERWFNRL 722

Query: 355 AN-------GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                     +      S        D  +P     ++ + +IL V    +  + + +  
Sbjct: 723 WRVVLDSRISLEGHSFLSAESFKSLNDIRLPDLSKISDDESAILLVAHDAITSVSQCLDG 782

Query: 408 --QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               ++  ++ +    + +     A  P     ++P    T+LY  +  + +L       
Sbjct: 783 MPYGLNTVISNLTKFTNSL-----ASSPLPTTASSPTS-QTILYTALSSLLRLLA---PI 833

Query: 466 VPKLANKIFDILFVADENRC 485
            P LA++ ++ L  ++ N  
Sbjct: 834 TPALASECWEHLHSSNPNTS 853


>gi|255037842|ref|YP_003088463.1| valyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950598|gb|ACT95298.1| valyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 880

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 147/396 (37%), Gaps = 58/396 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    E +F R+            +    ++P + +N         ++D ++SR+   W
Sbjct: 356 IEPRLSEQWFLRMEKISKPAFDNVMNDTVQLIPAKFKNT-YRHWMENVRDWNISRQ-LWW 413

Query: 217 GIKIP-------------------------------------DDPQYIMYVWIDALTNYL 239
           G +IP                                      DP  ++  W  +    +
Sbjct: 414 GHRIPAYYLNDGTMIVAKSKREALRKAQHEYQLFALTEEDITQDPD-VLDTWFSSWLWPI 472

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    +  PD  +   ++P +  V   +IL F    +    +      P      +    
Sbjct: 473 SVFNGIKEPDNEEVNYYYPTNDLVTAPEILFFWVARMIIAGYEYRGQYPFKNVYLTGIVR 532

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             +G K+SKSLGN  DPI++IE+ G D++R  ++     G D  YD+  +++  N     
Sbjct: 533 DKQGRKMSKSLGNSPDPIDLIEKYGADSIRTGMLFSSQAGNDLPYDEKLIEQGRN----- 587

Query: 357 GIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             GN +  +  ++     D  +P P     + +   S  ++ L E++++     I  AL 
Sbjct: 588 -FGNKIWNAFRLVKGWTVDSELPVPEGSKLAVQWFESKLNQTLAEVQDHFSKFRISDALN 646

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L+ +    +Y +  KP       P   ST    T++   +   LL  F+P ++ +I
Sbjct: 647 SVYKLIWDDFCAQYLEMIKP---GFEQPIDLST-YDSTLDFFDRQMRLLHPFMPFISEEI 702

Query: 474 FDIL--FVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           +  +      E+ C     Q  +    L   FD +F
Sbjct: 703 WQNIIERGEKESICIAHFPQAAEFDQSLLNDFDILF 738



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 57/180 (31%), Gaps = 18/180 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  DKEPYTIVIPPPNVTGVLHMGHMLNNTIQDILIRKARMEGKEACWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  +           L  S  +D    T E   +D
Sbjct: 92  VAMLKERGINKRDLTRDEFLEYCWEWTHKYGGIILKQLRKLGASCDWDRTRFTMEPDLYD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG+IY+G     +  +     +D+EV      Q       P+   + EG
Sbjct: 152 SVIDVFIDLYNKGEIYRGHRMVNWDPQARTTVSDEEVIMKEVNQKLVYLRYPLVGEDGEG 211


>gi|319760449|ref|YP_004124387.1| leucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039163|gb|ADV33713.1| leucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 867

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 83/206 (40%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + I YP+ + H+GH     I DV++R+ R+ G +VL   G D  G    +A
Sbjct: 30  KSKQKYYCLSMIPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGLPAEQA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L  +YD    I T + +++   +  +  +  KG +
Sbjct: 90  AITNNTNPSDWTYANIDYMKNQLKSLGFAYDWSREIITCQPQYYKWEQWFFNFLYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V   +         N +Q+ +   +F +++ Y  +LL  
Sbjct: 150 YKKTTIVNWCSYHETVLANEQVVNNS----CWRCQNQIQYKKMPQWFIKITDYAKELLDK 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            +    +   ++           G+ 
Sbjct: 206 LDELKYWPNQVKAMQRNWIGQSQGIN 231



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I++ G DA+R+F++          + + G+K          + N+
Sbjct: 625 KMSKSKNNGIDPNVIIKKYGADAVRFFIMFAAPAHATLEWRESGIKGAYR--FLQRLWNI 682

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
             + +   L + +         ++ +++I  +  + + ++ +++  +   + AL+ ++ L
Sbjct: 683 TYQHIKSGLINDELYFHQ---LSDKNKTIRHLVHKTIIKVTDDIDRRQSFNTALSTIMKL 739

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+ +        P   K +  DR      V  E +     LL  F P ++  ++  L 
Sbjct: 740 VNNL-----QNAP---KISIQDR-----IVLQEALSVTIRLLYPFTPHISFILWKSLG 784


>gi|313667476|ref|YP_004047760.1| valyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313004938|emb|CBN86365.1| valyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 945

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 138/406 (33%), Gaps = 79/406 (19%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             + V+     LL   +P +  +++  +    + +   S+   L P
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLALFP 784



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|293417757|ref|ZP_06660379.1| valyl-tRNA synthetase [Escherichia coli B185]
 gi|291430475|gb|EFF03473.1| valyl-tRNA synthetase [Escherichia coli B185]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEYNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|254524891|ref|ZP_05136946.1| leucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722482|gb|EED41007.1| leucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 880

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAAWTYKNIDHMRSQLQSLGYAIDWSREFATCRPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDELDGWPESVKTMQRNWIGRSEGL 234



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/513 (12%), Positives = 152/513 (29%), Gaps = 96/513 (18%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            G           H Q+  + A   G+  K  +        +        + D+     +
Sbjct: 336 MGYGTGAVMAVPGHDQRDNEVANKYGLPIKQVIALKDARTEEERSWDGSRWQDWYSDKSR 395

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           +        +  +  +G             + +   N      G   Q Y     PV + 
Sbjct: 396 QTELVNSAEFDGLDFQGAFEALAERFERKAQGQRRVNYRLRDWGVSRQRYWGCPIPVIYC 455

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
            + G           +L    +      PI+   E            +  R+T  +    
Sbjct: 456 AKCGAVPVPEEQLPVVLPEDVAFSGTGSPIKTDPEWRKTTCPE-CGGAAERETDTF---- 510

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWP-- 276
                     ++++   Y   T         K   +  P D ++ G +    H +Y+   
Sbjct: 511 --------DTFMESSWYYARYTSPGARDAVDKRGNYWLPVDQYIGGIEHAILHLMYFRFY 562

Query: 277 ------AFLLSANLPL---------------------------PKKV---------FSHG 294
                 A ++ +N P                            P  V          +  
Sbjct: 563 HKLLRDARMVDSNEPARNLLCQGMVIAETYYRPNPDGSKDWINPADVEVQRDERGRITGA 622

Query: 295 FILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ G+
Sbjct: 623 TLIADGQPVVVGGTEKMSKSKNNGVDPQAMVGKYGADTVRLFSMFAAPPEQSLEWNEAGV 682

Query: 347 KKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
                    +G+   + R  + + K             A   S +++       + ++ +
Sbjct: 683 ---------DGMARFLRRLWAQVQKHAADGAAPALDAAALDASQKALRRKTHETIGKVGD 733

Query: 404 NMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +   +   + A+A V+ L++ + ++          +    +   V     E ++ + +LL
Sbjct: 734 DYGRRHSFNTAIAAVMELMNALAKF----------EDGSGQGRAVRQ---EALQAIVLLL 780

Query: 463 QAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
               P  ++ ++ +L   +   E++ F   D  
Sbjct: 781 NPITPHASHALWQVLGHGETLLEDQPFPQADAG 813


>gi|165976930|ref|YP_001652523.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|254783548|sp|B0BR94|SYV_ACTPJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165877031|gb|ABY70079.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 954

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEAGNVYVARSEEEVRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E RE +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GTEAQKRGASQTLVRVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|53728827|ref|ZP_00134966.2| COG0525: Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208966|ref|YP_001054191.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|171855097|sp|A3N2F0|SYV_ACTP2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|126097758|gb|ABN74586.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 954

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEAGNVYVARSEEEVRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E RE +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GTEAQKRGASQTLVRVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|323141857|ref|ZP_08076718.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413604|gb|EFY04462.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 829

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 89/236 (37%), Gaps = 14/236 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 31  KDKPKSYVLEMFPYPSGNLHMGHVRNYSIGDVIARFRTMKGFNVLHPMGWDSFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +  +N  N       L +SY  D  + T ++ ++   +  ++    +G  
Sbjct: 91  AIKHNIPPKKWTLENIANMTRQLKALGLSYDWDREVTTCKEDYYKWTQWFFELFYKRGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            K   +  +         +++V  G          + V   +   +FF+++ Y D+LL  
Sbjct: 151 VKKESAVNWCDTCNTVLANEQVIDGK----CWRCDHEVVKKDLSQWFFKITDYADELLKD 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +  P +   ++           GL+        F + I   +D   +     D  
Sbjct: 207 LDLLPGWPERVKTMQHNWIGRSEGLE--------FSFEIPALNDTVAVYTTRPDTA 254



 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 123/375 (32%), Gaps = 36/375 (9%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +     +             +   N          Q Y     P+ +    G     
Sbjct: 393 FTGMEMHKAMSAIMDKAEAEGFGKRRVNYRLRDWLISRQRYWGAPIPIIYCPHCGEVLVP 452

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                  L    S           +E     K        +R+T         D      
Sbjct: 453 EDQLPVRLPEDVSFNAGAKSPLATSEEFVHCKCPKCGADATRET---------DTMDTFL 503

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLL 280
                   Y          D     +W P D ++ G +    H +Y          A L+
Sbjct: 504 CSSWYYLRYTDAHNDKMPFDKELNNYWGPVDQYIGGIEHAILHLLYSRFFVKVLRDAGLV 563

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             + P    + + G ++  G K+SKSLGNV+ P E++ + G D  R F++      ++  
Sbjct: 564 DYDEPF-SNLLTQGMVIKDGAKMSKSLGNVVSPEEILSKYGADTARLFILFAAPPERELE 622

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +   G++        N I  +V    +++ +            +E+D+ +  V    +++
Sbjct: 623 WSDQGVEGSFR--FLNRIWRIVQAFEAVLAQKV--TEYDHSNLSEADKDLRRVLHSSIKK 678

Query: 401 IRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +++     + A++ ++ LV+ +  Y +A K        P+       +  E I  L 
Sbjct: 679 VTNDIETRFNFNTAISTMMELVNALYAYKEAAK-------EPNA-----GLVYEAISDLI 726

Query: 460 ILLQAFVPKLANKIF 474
            ++  FVP +  +++
Sbjct: 727 KMMSPFVPHITEELW 741


>gi|91785203|ref|YP_560409.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358460|sp|Q13U82|SYL_BURXL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91689157|gb|ABE32357.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 863

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 6/199 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     
Sbjct: 29  VTDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG 
Sbjct: 89  AAMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLN 204

Query: 179 YYESHPEFILPIERRNEVI 197
             E           +   I
Sbjct: 205 DLEGLGWPERVKIMQQNWI 223



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++         G   
Sbjct: 622 EKMSKSKNNGVDPQLLIDQHGADTARLFVMFAAPPEQSLEWSGSGVE---------GASR 672

Query: 361 LVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    +   +           ++ ++ +      VL++   + Q    +  ++ 
Sbjct: 673 FLRRVWSFSQANEAALRQGGTFDAAQLSDVEKVLRREIYSVLKQADFDYQRLQYNTVVSA 732

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  E    +  +L   VP L  +++  
Sbjct: 733 AMKMLNALD----------------SAKGARPAVLRETCSVMLRVLYPVVPHLTFQLWQE 776

Query: 477 LFVADE 482
           L  ADE
Sbjct: 777 LGYADE 782


>gi|14521127|ref|NP_126602.1| isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|11135009|sp|Q9V072|SYI_PYRAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5458344|emb|CAB49833.1| ileS isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 1067

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 84/394 (21%), Positives = 158/394 (40%), Gaps = 21/394 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKG---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              T +   K    K  I K      + +       + N                  P+ 
Sbjct: 413 FRATDQWFLKISKVKDKIIKENDEKVTWYPDWVKIRFDNGVRDSGDWVISRQRYWGIPLP 472

Query: 159 -WMEEEGYFFRLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W  E+G  + + ++++ +      E + E I   E   E +  ++  L    L R   D
Sbjct: 473 IWQSEDGEIYVVGSWRELVELAVAIEVNGERIELPESYEEKLKVIEEKLGPEDLHRPYVD 532

Query: 216 WGI-----KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
             I     K     + ++ VW D+      + GY  N +    K WPAD  V G+D +  
Sbjct: 533 AFIIKVNGKDMRRVKDVVDVWFDSGIASWASLGYPRNKE-LFEKLWPADFIVEGEDQVTK 591

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    + +    +P  +       +  KG+K+SKSLGN+I P EV+E  G D  R++
Sbjct: 592 WFYSQQAASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVERAGRDTFRFY 651

Query: 329 LVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           ++      ++  +   G+++ R   ++   +  L S  +S+   D   + P    F E D
Sbjct: 652 MLWATNPWENLKFSWKGVEQVRRMLNILWNVYVLASTYMSLDNFDPRKLNPDELPFREED 711

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDR 443
           + ILS  + ++ E+   +++  + +A   + + V       Y     ++ W  +  +PD+
Sbjct: 712 KWILSRVNSLISEVENGIESFYLTKATRALYNFVVEDLSRWYVRLIRKRLWV-EGEDPDK 770

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   Y   +V   L  LL  F P +A +I+  L
Sbjct: 771 LAA-YYTLWKVFDVLLRLLAPFTPYIAEEIYQNL 803



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 63/184 (34%), Gaps = 22/184 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I   
Sbjct: 37  KDGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            + A                      K F   N +   +   +L I   +D+   T +  
Sbjct: 97  VEQALGLKTKKEIEEKIGVENFIKKCKEFALNNLKIMTEQFKMLGIWMDWDNPYMTIKNE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQW 159
           + ++     K+  +KG + K      +  R E    + EV                PV+ 
Sbjct: 157 YIESAWFTLKRAWEKGLLEKDKRVLHWCPRCETALAEHEVRGEYKLRKDPSIYVKFPVEG 216

Query: 160 MEEE 163
            E E
Sbjct: 217 KENE 220


>gi|154276782|ref|XP_001539236.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150414309|gb|EDN09674.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 834

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA
Sbjct: 62  GKEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N ++    +     +D  + T     +   + ++  +  +G  Y
Sbjct: 122 IERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSPEFYKHTQRIFLMLYKEGLAY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+ +E + +FFR++A+++ LL   
Sbjct: 182 QAKARVNYDPIDKTVLANEQVDANGCSWRSGAK---VEKLELKQWFFRITAFKEALLKDL 238

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ES     L       V+S  +  L   S +   F       +    +     D L
Sbjct: 239 ES-----LEASWPERVLSMQRHWLGKSSGAHIKFLVSAPDDNYDIQVFTTRPDTL 288


>gi|153811612|ref|ZP_01964280.1| hypothetical protein RUMOBE_02004 [Ruminococcus obeum ATCC 29174]
 gi|149832353|gb|EDM87438.1| hypothetical protein RUMOBE_02004 [Ruminococcus obeum ATCC 29174]
          Length = 1063

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 68/457 (14%), Positives = 144/457 (31%), Gaps = 15/457 (3%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    D  G   A+          VFV +         D     +D      + 
Sbjct: 356 RDYDLPFVQFVDGKGDMTAETPYAG-----VFVKKADPLVLQDLDKEGKLFDAPKFEHDY 410

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            H   C       + +    K        +R+    N      G  G++ +   N   W 
Sbjct: 411 PHCWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTINWIPESIG-KGRFGDWLENVQDWG 469

Query: 161 EEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SLSRKTFDWG 217
                ++      +Q +    +       L     NE    V+     +  ++ K  + G
Sbjct: 470 ISRNRYWGTPLNIWQCECGHMHSIGSRQELFEMSGNEKAKTVELHRPYIDEITLKCPECG 529

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
             +   P+ ++  W D+         Y         K +PAD      D     F+++  
Sbjct: 530 GTMHRVPE-VIDCWFDSGAMPFAQHHYPFENKELFEKQFPADFISEAVDQTRGWFYSLLA 588

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            + +L    P    +         G+K+SKS GN +DP + +E+ G DA+R++     A 
Sbjct: 589 ESTILFNQAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYINSAP 648

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSV 393
                +    +++     +           +   + ++D              D+ +LS 
Sbjct: 649 WLPNRFHGKAVQEGQRKFMGTLWNTYAFFVLYANIDNFDPTKYTLDYDNLPVMDKWLLSK 708

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTV 452
            + V++ + + + N  I  +   +   V E+ + Y    +     K              
Sbjct: 709 LNSVVKTVDDCLANYKIPESARALQEFVDEMSNWYVRRSRERFWAKGMEQDKINAYMTLY 768

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  ++      +P +  +I+  L  + +    +S+
Sbjct: 769 TALVTISKAAAPMIPFMTEEIYQNLVRSVDKEAIESI 805



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K+             N +PHIGH    +I D++ R+  + G  V    G D HG  +  +
Sbjct: 49  KDDPTYMFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 108

Query: 61  AAQNAGVTTKVFVDQN-----SRNFRDMADVLDISYDDFIR-------------TTEKRH 102
             +  G+  K  +++       +  ++        ++DF               T    +
Sbjct: 109 VEKKLGLDGKEQIEEYGMEPFIQQCKESVWKYKGMWEDFSSTVGFWADMENPYVTYHDDY 168

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +K  +YKG     Y  R     +  EV +G  
Sbjct: 169 IESEWWALKEIWNKKLLYKGFKIVPYCPRCGTPLSAQEVSQGYK 212


>gi|194426565|ref|ZP_03059119.1| valyl-tRNA synthetase [Escherichia coli B171]
 gi|194415304|gb|EDX31572.1| valyl-tRNA synthetase [Escherichia coli B171]
 gi|323162056|gb|EFZ47928.1| valyl-tRNA synthetase [Escherichia coli E128010]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTDAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|332159141|ref|YP_004424420.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034604|gb|AEC52416.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 1067

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 83/394 (21%), Positives = 158/394 (40%), Gaps = 21/394 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKG---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              T +   K    K  I K      + +       + N                  P+ 
Sbjct: 413 FRATDQWFLKISKVKDKIIKENDEKVTWYPDWVKIRFDNGVRDSGDWVISRQRYWGIPLP 472

Query: 159 -WMEEEGYFFRLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W  E+G  + + ++++ +      E + E I   E  NE +  ++  L    L R   D
Sbjct: 473 IWQSEDGEIYVVGSWKELVELAVAIEVNGERIELPEDYNEKLRVIEEKLGPEDLHRPYVD 532

Query: 216 WGI-----KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
             I     K     + ++ VW D+      + GY  N +    K WPAD  V G+D +  
Sbjct: 533 AFIIKVNGKEMRRVKDVVDVWFDSGIASWASLGYPRNKE-LFEKLWPADFIVEGEDQVTK 591

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    + +    +P  +       +  KG+K+SKSLGN+I P EV+E+ G D  R++
Sbjct: 592 WFYSQQAASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFY 651

Query: 329 LVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           ++      ++  +   G+++ R   ++   +  L S  +S+   +   + P    F E D
Sbjct: 652 MLWATNPWENLRFSWKGIEQVRRMLNILWNVYVLASTYMSLDNFNPRKLKPEKLPFREED 711

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDR 443
           + ILS  + ++ ++   ++   + +A   +   V       Y     ++ W  +  +PD+
Sbjct: 712 KWILSRVNSLIGKVENGIETFYLTKATRALYDFVVEDLSRWYVRLIRKRLWV-EGEDPDK 770

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   Y   +V   L  LL  F P +A +I+  L
Sbjct: 771 LAA-YYTLWKVFDVLTRLLAPFTPYIAEEIYQNL 803



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 20/160 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I   
Sbjct: 37  KNGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            + A                      K F   N +   +   +L +   +D+   T +  
Sbjct: 97  VEQALGLKTKKEIEEKIGVENFIKKCKEFALNNLKIMTEQFKMLGVWMDWDNPYMTIKNE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + ++     KK  +KG + K      +  R E    + EV
Sbjct: 157 YIESAWFTLKKAWEKGLLVKDKRVLHWCPRCETALAEHEV 196


>gi|313680233|ref|YP_004057972.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152948|gb|ADR36799.1| valyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 866

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 80/394 (20%), Positives = 140/394 (35%), Gaps = 38/394 (9%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           + T ++        L+ +   K               D  +Y +       D        
Sbjct: 342 LATCDRCGTAVEYALFPQWWLKMKPLADEVLPKLKEGDIKFYPERWRKVNIDWF-----E 396

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           N   W      ++    +Q       E H     P     +       G  +L       
Sbjct: 397 NIRDWNISRQLWW---GHQIPAWYCPEGHVTVPEPERFDEDPKECAVCGSTELE------ 447

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                   DP  ++  W  +    L+T G+          F+P  + V G DIL      
Sbjct: 448 -------RDPD-VLDTWFSSALWPLSTLGW-PEDTEDYRAFYPTSVLVTGYDILFLWVSR 498

Query: 275 W--PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
                +      P    +     +  KG+K+SKS GNV+DP+E++E+ G DALR+ L+  
Sbjct: 499 MEVSGYHFDGRRPFEAVMLHGLVLDEKGKKMSKSKGNVVDPLELVEQYGADALRFALIHL 558

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G+D  +D+  ++  +  + AN + N  +R V M  + ++     P   T +D  + +
Sbjct: 559 ATGGQDIRFDRRWVE--MGRNFANKLWN-AARFVFMNREGFEAKTDEP---TLADRWMAA 612

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
                ++ I +      +  A  +V  LV     D Y +A KP  L+  N    +  L  
Sbjct: 613 RLREGIRNITQLYDAYELALASREVYQLVWSEFCDWYIEAAKP-ALRAGN----AATLRG 667

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
               +  L  LL  F+P + ++I+  L    E  
Sbjct: 668 LETALEALLKLLHPFMPFVTSEIYTALKQDPEAE 701



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA +  + D L R+ RL G + L+  GTD  G      
Sbjct: 32  SGKPPFVIVMPPPNVTGVLHMGHALDNALQDALTRYKRLRGYEALWLPGTDHAGIATQVV 91

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + +++     +    L  S D      T ++   
Sbjct: 92  VERLLAKEGKTRHDLGREKFLERVWQWREESGGQILEQLKRLGASADWSRLAFTMDEARS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              R  + +   +G IY+G     +  R E   +D EV
Sbjct: 152 RAVRYAFVRYHHEGLIYRGERLLNWCPRCETTLSDLEV 189


>gi|238910631|ref|ZP_04654468.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGSIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|21243508|ref|NP_643090.1| leucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|29337025|sp|Q8PIW4|SYL_XANAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21109070|gb|AAM37626.1| leucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 880

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGL 234



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 77/196 (39%), Gaps = 27/196 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+    R    L   +
Sbjct: 637 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGVDGMARFMRRLWAQV 696

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
              V    ++ L           A +   ++I       + ++ ++   +   + A+A V
Sbjct: 697 HKHVGEGTAVAL--------DVAALSAEQKAIRRKTHETIGKVGDDYGRRHSFNTAIAAV 748

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + + ++ DA           ++   V     E +  + +LL    P  ++ ++ +L
Sbjct: 749 MELSNALAKFDDAS----------EQGRAVRQ---EALEAMVLLLNPITPHASHALWQVL 795

Query: 478 FVAD---ENRCFQSLD 490
              +   EN  F   D
Sbjct: 796 GRGETLLENVAFPQAD 811


>gi|296104927|ref|YP_003615073.1| valyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059386|gb|ADF64124.1| valyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 951

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 132/398 (33%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGSIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNEGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPNGIESHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +D D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEDQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MILSLADRWILAEFNQTVKAFREALDSYRFDIAAGILYEFTWNQFCDWYLELAKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                        + V+  L  L    +P +   I+  
Sbjct: 727 GTEAELRGTRNTLITVLEGLLRLAHPIIPFITETIWQR 764



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|254429394|ref|ZP_05043101.1| leucyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195563|gb|EDX90522.1| leucyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 834

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 50  GKEKFYCLSMFPYPSGRLHMGHVRNYSIGDVVSRYQRMQGKNVLQPMGWDAFGLPAENAA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R     L   Y  D  + T    ++   +  + K+ +KG +Y
Sbjct: 110 IKNKVAPAKWTFENIDYMRGQLQRLGFGYDWDRELATCTPEYYRWEQWFFTKLYEKGLVY 169

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 170 RKMSTVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYADELLNDL 225

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 226 DQLDGWPEQVKTMQRNWIGRSEG 248



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 109/276 (39%), Gaps = 36/276 (13%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y              D +   +W P D ++ G +    H +Y   F        
Sbjct: 511 FMESSWYYARYCSPQSDTAMLDPAATNYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDTG 570

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P  K++   G +L  G K+SKS GN +DP ++IEE G D +R F++      + 
Sbjct: 571 LVNCDEPF-KQLLCQGMVLKDGAKMSKSKGNTVDPQQMIEEYGADTVRLFMMFAAPPEQS 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             ++  G++       A      + R V+  ++  +       A  ++ +++       +
Sbjct: 630 LEWNDAGVEG------AFRFIKRLWRLVAEHVEAGNAGTLDVNALDDAGKTLRRKTHETI 683

Query: 399 QEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           Q++ ++   +   + A+A V+ L++EV ++            N D  + V +  +E    
Sbjct: 684 QKVSDDYGRRSTFNTAIAAVMELINEVSKF----------DANSDNHAAVKHEALEAAVL 733

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC--FQSLDQ 491
           L       +P   + ++  L   +      + S+D+
Sbjct: 734 LLA---PIIPHAGHSLWQALGHEEAVIDARWPSVDE 766


>gi|126341628|ref|XP_001379477.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Monodelphis domestica]
          Length = 903

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 5/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+DV+ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDVMARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R+  D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIEQSLHPQSWTQSNIKHMREQLDKLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YRKEALVNWDPVDQTVLANEQVDENGCSWRSGAK---VEQKYMRQWFIKTTAYAKAMREA 255

Query: 180 YESHPEFILPIERRNEVISFVK 201
               PE+      +   I    
Sbjct: 256 LADLPEWYGIKGMQAHWIGDCD 277



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 102/318 (32%), Gaps = 63/318 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          D + A  W P DL++ GK
Sbjct: 502 MNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNTHSPFDKAVANHWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSANL--------PLPKKV--------------------------- 290
           +    H  Y        N         P  K +                           
Sbjct: 562 EHAVMHLFYARFMSHFCNAQKMVKHREPFHKLLVQGLIKGQTFRLPSGQYLKREEIDLTG 621

Query: 291 --FSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               H     K     EK+SKS  N IDP EV+++ G+D +R +++      KD  +D  
Sbjct: 622 SEPVHAKTKEKLEVTWEKMSKSKYNGIDPEEVVKQYGIDTVRLYILFAAPPEKDLLWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L S +   I     G +PTP   +  ++          + ++ +
Sbjct: 680 -VKTDALPGVLRWQQRLWSVTTKFIEARASGQVPTPHVLSHKEQEEARKLGEYKNSIISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +  ++ L++  ++ ++ L + +     A +   L     + A          +  + 
Sbjct: 739 VTTHFTEDFLLNSVVSHLMGLSNALS---QASQRVVLHSREFEDA----------LAAVC 785

Query: 460 ILLQAFVPKLANKIFDIL 477
           ++     P L ++++  L
Sbjct: 786 VMASPLAPHLTSELWAGL 803


>gi|330811519|ref|YP_004355981.1| Valine--tRNA ligase (Valyl-tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379627|gb|AEA70977.1| Valine--tRNA ligase (Valyl-tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 948

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 66/403 (16%), Positives = 123/403 (30%), Gaps = 89/403 (22%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKHNLGPDVALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
               +  K      D+ V G DI+ F         +           +P           
Sbjct: 487 PQQTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++I+                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTSGLMQPKLAKQIEKATREEFAEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                T +D  I+S   R   E+   +       A   +   +     D Y +  KP  L
Sbjct: 661 EAFELTLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VL 719

Query: 437 KKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              N   +R        V V+     L   F+P +  +I+  +
Sbjct: 720 WDENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRI 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGQNRHDLGREKFLEKVWEWKDESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGFLWNLKYPL 201


>gi|315288383|gb|EFU47781.1| valyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 925

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|43302|emb|CAA29322.1| unnamed protein product [Escherichia coli K-12]
          Length = 951

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 133/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDTFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|325499816|gb|EGC97675.1| valyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 951

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGD 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|311741282|ref|ZP_07715106.1| valine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303452|gb|EFQ79531.1| valine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 913

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 67/406 (16%), Positives = 126/406 (31%), Gaps = 29/406 (7%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
            IR   +      + +   +   G   +        L  + + +  +    A G      
Sbjct: 345 EIREALREQGRIVKEIRPYVHSVGHSERSGEPIEPRLSLQWFVDVAK-MAKASGDAVREG 403

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              +     E  +F             +      +PI    E     +  +       + 
Sbjct: 404 DTTLHPQSLEPRYFEWVDDMHDWCISRQLWWGHRIPIWYGPEGEDGQRDIVCVGPD--EE 461

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
              G +   D   ++  W  +     +T G+ +       KF+P ++ V   DIL F   
Sbjct: 462 PPAGYEQDPD---VLDTWFSSALWPFSTLGWPEKTP-DLEKFYPTNVLVTAYDILFFWVA 517

Query: 274 YWPAFLLSAN----------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
               F   A                 +P             +G K+SKSLGN IDP++ +
Sbjct: 518 RMMMFGTFAGSHTPELLGEGTDGRPQVPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWV 577

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G DALR+ L R    G D     D      N   A  + N  ++   M       + 
Sbjct: 578 RDYGADALRFTLARGANPGVDLPLGSDAAAAARN--FATKLFN-ATKFALMNGAGVSTL- 633

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
           P     +++D  IL     V  ++   + +    +A   +     +   D Y +  K   
Sbjct: 634 PNRAELSDADRWILDRAEEVRAKVDAYLDDYQFAKANELLYHFTWDELCDWYLEIAKTQI 693

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +    ++      V   V+  +  LL   +P +   ++  L   +
Sbjct: 694 PRDGVSEQGRNTQIVLGRVLDVVLRLLHPTMPFVTEVLWKALTGGE 739



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 54  SEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTK 113

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T          + F+D+                R + D +D S + F  T + 
Sbjct: 114 VEAKLKETEGKKRWDYEREEFIDKVWEWKEQYGGTIQNQMRAIGDSVDWSRERF--TLDD 171

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D+G IY+      +S   E   +D EV  
Sbjct: 172 GLSRAVQTIFKNLYDEGMIYQANRLVNWSPVLETAVSDIEVVY 214


>gi|149236447|ref|XP_001524101.1| hypothetical protein LELG_04914 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452477|gb|EDK46733.1| hypothetical protein LELG_04914 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 930

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 85/207 (41%), Gaps = 5/207 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE++  Y      YP+ + H+GH     I+DV+AR+ ++ G +V+   G D  G     
Sbjct: 62  LKEKKDFYSLVMFPYPSGKLHLGHLRVYTISDVIARYKKMQGFNVINPMGWDAFGLPAEN 121

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G+   ++ +QN    ++       D  +D  I T    ++   + ++  + +KG 
Sbjct: 122 AAVERGIDPAIWTEQNIATMKEQMQCFLADFDWDREISTCSPEYYKWTQKIFLMLFEKGL 181

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D+    +++V               V+    + +F  ++ Y D+L+ 
Sbjct: 182 AYQKEAEINWDPIDKTVLANEQVDSE---GRSWRSGALVEKKFLKQWFIGITKYADRLVD 238

Query: 179 YYESHPEFILPIERRNEVISFVKSGLK 205
             +    +   ++   +       GL+
Sbjct: 239 DLKDLEGWPQHVKTMQKNWIGRSKGLQ 265



 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 26/205 (12%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P+ K+   H  +  +  K+SKS  N  DP E I++ G DA R  ++          +D
Sbjct: 645 KAPVIKQTGKHPKVTFE--KMSKSKHNGADPQECIQKYGADATRAQILFLAPVSDTLQWD 702

Query: 343 KDGLKK-----RVNADLANGIGNLVSR-----SVSMILKDYDGMIPTPGAFTESDES--I 390
           +  +       R    LA+    L        +   I K       +  +    D    +
Sbjct: 703 EKQILGVDRWLRKVFKLADSFPLLADEMRQTSNSDAIAKVELQFTGSKESLELGDREVTV 762

Query: 391 LSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            +    +++ I  ++ +   ++  ++ ++ + + + +              P+  +    
Sbjct: 763 YNEVQNLVKSINLSLNDVYSLNTVVSDLMKITNAITKVL-----------GPNGCNVNPV 811

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
           +  E+ R L I +    P  A + +
Sbjct: 812 LVDELYRTLLICMAPVTPVTAEECW 836


>gi|126666975|ref|ZP_01737951.1| leucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628691|gb|EAZ99312.1| leucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 862

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    ++    L   YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IANKTAPAKWTYSNIEYMKNQLKQLGFGYDWSRELATCKPDYYRWEQWFFARLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+      +F R++ Y ++LL+  
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVVDG----RGWRSGALVEKKAIPQWFIRITNYAEQLLNDM 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DDMDGWPEQVKTMQRNWIGKSVG 229



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 73/185 (39%), Gaps = 27/185 (14%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I+  G D +R F++      +   +   G++         G    
Sbjct: 620 KMSKSKNNGIDPQSIIDAHGADTVRLFMMFAAPPEQSLEWSDSGVE---------GAHRF 670

Query: 362 VSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
           + R   ++ +        P     A  +  +++       + ++ +++  +L  + A+A 
Sbjct: 671 LKRLWRLVNEQVTSADTVPAIDVPALNDGQKNLRRKTHETIAKVSDDISRRLTFNTAIAA 730

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L++EV +  +  +P                V  E +    ++L   VP + + ++  
Sbjct: 731 VMELLNEVSK-LNDSEP------------QTRAVRQEALETAVMMLSPIVPHVCHSLWQS 777

Query: 477 LFVAD 481
           L   +
Sbjct: 778 LGHNE 782


>gi|194366684|ref|YP_002029294.1| leucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693484|sp|B4SRE7|SYL_STRM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194349488|gb|ACF52611.1| leucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 880

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAAWTYKNIDHMRTQLKSLGYAIDWSREFATCRPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDELDGWPESVKTMQRNWIGRSEGL 234



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 79/197 (40%), Gaps = 29/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+         +G+  
Sbjct: 637 EKMSKSKNNGVDPQAMVGKYGADTVRLFSMFAAPPEQSLEWNEAGV---------DGMAR 687

Query: 361 LVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R  + + K   D             S +++       + ++ ++   +   + A+A 
Sbjct: 688 FLRRLWAQVQKHAADGAAPALDVAVLDASQKALRRKTHETIGKVGDDYGRRHSFNTAIAA 747

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L++ + ++              D+   V     E ++ + +LL    P  ++ ++ +
Sbjct: 748 VMELMNALAKF----------DDGSDQGRAVRQ---EALQAIVLLLNPITPHASHTLWQV 794

Query: 477 LFVAD---ENRCFQSLD 490
           L   +   E++ F   D
Sbjct: 795 LGHGETLLEDQPFPQAD 811


>gi|119899504|ref|YP_934717.1| leucyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166230607|sp|A1KAH5|SYL_AZOSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119671917|emb|CAL95831.1| unnamed protein product [Azoarcus sp. BH72]
          Length = 873

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y  +   YP+ + H+GH     I DVLARFHR+ G +VL   G D  G     AA
Sbjct: 31  TRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMRGYNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +   + T    ++   + L+ ++ +KG IY
Sbjct: 91  IQNNVPPAKWTYANIDYMKGQLKRLGFAIDWSREVATCTPEYYRWEQWLFTRLFEKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V  G            V+  E   Y+ +++AY D+LL   
Sbjct: 151 KKLGTVNWDPVDETVLANEQVIDG----RGWRSGALVEKREIPMYYMKITAYADELLEAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++   +       G
Sbjct: 207 DGLPGWPEQVKLMQKNWIGRSEG 229



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 112/364 (30%), Gaps = 40/364 (10%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVIS 198
           +      G+    + + +    E  ++F   A  D   +  +    +  P  +    +  
Sbjct: 482 QCSCPKCGKPARRETDTMDTFVESSWYFLRYASPDSTTAMVDERVNYWAPVDQYIGGIEH 541

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTGYLDNPDGSKAKF 255
            +   L     +R   D G+    +P          L         T Y +   G K   
Sbjct: 542 AILHLLYSRFFTRAMRDCGLVNVSEP-------FTNLLTQGMVVAETYYRELDGGKKQWL 594

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            PAD+ V   +          A L S  LP+         ++   EK+SKS  N +DP  
Sbjct: 595 NPADVQVERDE----RGRITAAKLASDGLPV---------VIGGTEKMSKSKNNGVDPQA 641

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYD 374
           ++++ G D  R F++      +   +   G++    +     + N      S        
Sbjct: 642 LVDQYGADTARLFIIFAAPPDQQLEWSDSGVEGA--SRFLRRVWNFGHAFASEFRAALPA 699

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                 G    +   +       L++   +      +  ++  + +++            
Sbjct: 700 ARALAAGTLPAALADVRREIHTHLKQANYDFGKHQFNTVVSAAMKILNA----------- 748

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            L+K   D A+    V  E    L  LL    P +A+ ++       +     +  + L+
Sbjct: 749 -LEKAPRDDAAAHAEVAEEGFSILVRLLSPITPHIAHALWQDCGFGGDIVQ-AAWPEPLE 806

Query: 495 PGFM 498
               
Sbjct: 807 AALK 810


>gi|189083214|sp|Q3BRE4|SYL_XANC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 880

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGL 234



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 76/196 (38%), Gaps = 27/196 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+    R    L   +
Sbjct: 637 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGVDGMARFMRRLWVQV 696

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
              V    ++ L             +   ++I       + ++ ++   +   + A+A V
Sbjct: 697 HKHVGEGAAVAL--------DVAVLSAEQKAIRRKTHETIGKVSDDYGRRHSFNTAIAAV 748

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + + ++ DA           ++   V     E +  + +LL    P  ++ ++ +L
Sbjct: 749 MELSNALAKFDDAS----------EQGRAVRQ---EALEAMVLLLNPITPHASHALWQVL 795

Query: 478 FVAD---ENRCFQSLD 490
              +   EN  F   D
Sbjct: 796 GRGETLLENVAFPQAD 811


>gi|537100|gb|AAA97155.1| valyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
          Length = 951

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 133/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE +       A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDXFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|288801202|ref|ZP_06406657.1| valine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331813|gb|EFC70296.1| valine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 879

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 130/381 (34%), Gaps = 55/381 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                + P++      +F  +  + D  L           P + +N         +KD  
Sbjct: 343 CSERTNVPIEPKLSTQWFLSMQHFADMALPPVMDDNIQFYPQKYKNT-YRHWLENIKDWC 401

Query: 209 LSRKTFDWGIKIP--------------------------------------DDPQYIMYV 230
           +SR+   WG +IP                                         +  +  
Sbjct: 402 ISRQ-LWWGHRIPAYYFEIEGKRDFVVAESIEDALKQIENKYNTTLTENQLSQDEDCLDT 460

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
           W  +    ++    +++PD ++ K++ P  + V G DI+ F    +    +     +P  
Sbjct: 461 WFSSWLWPISVFNGINDPDNAELKYYYPTSVLVTGPDIIFFWVARMIMAGYEYKHEMPFK 520

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              F+       G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D+   +
Sbjct: 521 SVYFTGIVRDKLGRKMSKSLGNSPDPLDLIEQYGADGVRMGMMLSAPAGNDILFDETLCE 580

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +  N        N +  +  +I          P     + +   +   +  QE+ +    
Sbjct: 581 QGRN------FNNKIWNAFRLIKGWSTSEEEQPATNAIAVKWFEAKLRQANQELNDLFSK 634

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
             I  AL  V  L  +     Y +  KP      +          T++    L  +L  F
Sbjct: 635 YRISEALMVVYKLFWDEFSSWYLEMIKPSYGSPIDKK----TFEATLQFFETLLKMLHPF 690

Query: 466 VPKLANKIFDILFVADENRCF 486
           +P +  +++  ++  +E +  
Sbjct: 691 MPFITEELWQHIYTREEGQSI 711



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  SREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T +     
Sbjct: 92  VNRLAQQGIKKTDITRDEFLGHAWDWTKEHGGIILKQLRKLGASCDWDRTAFTMDDERSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +  + +   +D+EV  
Sbjct: 152 SVIKVFCDLYNKGLIYRGVRMVNWDPKAQTALSDEEVIY 190


>gi|114046707|ref|YP_737257.1| valyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|113888149|gb|ABI42200.1| valyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 958

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDANGKVYVGRNEAEVRAKHNIDDAIALRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NVEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +  D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEGQDCGPNSPD 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M N     A   +         D Y +  KP
Sbjct: 668 YQGGEMELSLADRWIIGLFNQTVKTYDDHMANYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  N  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGNEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 21/175 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLE 95

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
                                +  Q+          +   + +D    T ++      + 
Sbjct: 96  AEEGKSRHDLGRDAFMEKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQE 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ ++ +   IY+G     +  +     +D EV       +      P+   E  
Sbjct: 156 VFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKEKQGHMWHLRYPLADGELT 210


>gi|209883517|ref|YP_002287374.1| leucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229559997|sp|B6JAI4|SYL_OLICO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209871713|gb|ACI91509.1| leucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 879

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYRRAKGHNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +     + +S D    I T +  ++   + ++      G + 
Sbjct: 92  MQNKTHPAKWTYANIAAMKKQLKSMGLSLDWAREIATCDPSYYKHQQRMFLDFLKAGLVE 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +FF++S Y ++LL+  
Sbjct: 152 RKQSKVNWDPVDQTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISDYSEELLTAL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++   +   +    +       GL
Sbjct: 208 DTLDRWPEKVRLMQKNWIGRSEGL 231



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 84/179 (46%), Gaps = 17/179 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP ++I   G D  R+F++ +    +D  + ++G++          +  
Sbjct: 635 EKMSKSKRNTIDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVQGANR--FVQRVWR 692

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           LV+ +   + KD      +  A T +D + + S   R L ++ + ++    + A+A++ +
Sbjct: 693 LVNLAAPHLPKD------SAAAGTSADTKPLRSTAHRTLADVSQAIERLRFNTAIAKLYA 746

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V  ++   D  +     K +P  A++V     E +  L  ++   +P LA + ++ L 
Sbjct: 747 FVGPLNEAIDDPR----LKADPAWAASVR----EALDMLVRMIAPMMPHLAEQCWEALG 797


>gi|77462536|ref|YP_352040.1| valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|90108434|sp|Q3J4Z5|SYV_RHOS4 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77386954|gb|ABA78139.1| Putative valyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 987

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ +      A+++P ++ + G DI+ F    +   
Sbjct: 551 PVWRDPD-VLDTWFSSGLWPIGTLGWPEETP-ELARYFPTNVLITGFDIIFFWVARMMMM 608

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +   +P             KG+K+SKSLGNV+DP+E+I+E G DA+R+ L    A G
Sbjct: 609 QLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMG 668

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D       ++     +    + N    + ++ + + +      P A    +  I+    
Sbjct: 669 RDLKLSTARIQG--YRNFGTKLWNACRFAEMNGVWEGHATQAAPPAATATVNRWIIGETG 726

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           RV +E+   +       A   + + V     D Y +  KP      + + A+        
Sbjct: 727 RVREEVDAALAAYRFDSAANALYAFVWGKVCDWYVEFSKPLF----DTEAAAETRATMGW 782

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ Q  +LL   +P +   ++
Sbjct: 783 VLDQCMVLLHPIMPFITEDLW 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 53/158 (33%), Gaps = 23/158 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVER 95

Query: 65  AGVT---------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +           + +    D S + F  T +    
Sbjct: 96  ELAKSGQPGRREMGREAFLEKVWEWKEQSGGTIVNQLKRLGASCDWSRNAF--TMDPNFQ 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                ++  + +KG IY+G     +    E   +D EV
Sbjct: 154 RAVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEV 191


>gi|307250775|ref|ZP_07532706.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306857187|gb|EFM89312.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 948

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 72/397 (18%), Positives = 133/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEAGNVYVARSEEEVRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 610 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E RE +       A   +         D Y +  KP     
Sbjct: 665 VEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKPVFTNG 724

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T   +        V V+ +L  L    +P +  +I+ 
Sbjct: 725 TEAQKRGA-SQTLVRVLEKLLRLAHPIMPFITEEIWQ 760



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|254418324|ref|ZP_05032048.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184501|gb|EDX79477.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 849

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 88/246 (35%), Gaps = 10/246 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y+     YP+   H+GHA   ++ DV+AR  R  G DVL   G D  G     A
Sbjct: 28  TGRPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARSKRAQGYDVLHPMGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  K +   N    RD   +L +S D      T +  ++   +  + ++  +G +
Sbjct: 88  AMERGIHPKGWTYDNIAQMRDQLKLLGLSLDWSREFATCDPEYYGKQQAWFLELYRRGLV 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  +   +F R++ Y D L+  
Sbjct: 148 YRKDGVVNWDPVDNTVLANEQVIDG----RGWRSGAVVEKRKLNQWFLRITDYADDLIDG 203

Query: 180 YESHPEFILPIERRNEVISFVKSGL-KDLSLSRKTF---DWGIKIPDDPQYIMYVWIDAL 235
            ++   +   +    E       GL      + +       G++I       +Y      
Sbjct: 204 LKTLDRWPEKVRLMQENWIGRSKGLQMTWKWAGEAPAASPDGLEIYTTRPDTLYGASFMG 263

Query: 236 TNYLTT 241
                 
Sbjct: 264 IAPDHP 269



 Score = 90.2 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 81/211 (38%), Gaps = 31/211 (14%)

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++   EK+SKS  NV+ P E++E  GVDA R F++ +    +D  +   G++        
Sbjct: 613 MIGDIEKMSKSKKNVVAPQEILESHGVDAGRLFVLSDSPPERDVQWTPGGVE-------- 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            G    V R+ ++    +D          +++  +L    + ++ + E ++    + A+A
Sbjct: 665 -GASRFVQRTWTL----FDAYDAGFAGEDKANAELLRETHKAIKAVSEGVEGFRFNSAIA 719

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++ + V+ V                 D A        + +  LA L+  F P LA + + 
Sbjct: 720 KLYAFVATV----------------RDSAQAGGDAKRQALSALARLIAPFTPHLAEECWT 763

Query: 476 ILFVAD--ENRCFQSLDQRLKPGFMLHKTFD 504
            L       +  +   D  L     +     
Sbjct: 764 RLGEDGMVLDAPWPVWDAALAADDEVVLPIQ 794


>gi|229513430|ref|ZP_04402894.1| valyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229349307|gb|EEO14263.1| valyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 953

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILARPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|260779404|ref|ZP_05888295.1| valyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604494|gb|EEX30794.1| valyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 957

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 119/360 (33%), Gaps = 58/360 (16%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +        + +      ++
Sbjct: 414 FSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRTEEEVRTNNNLAPVVVLRQDDDVL 473

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN----- 283
             W  +      T G+ +  +  K    P+D+ V G DI+ F         +  N     
Sbjct: 474 DTWFSSALWTFGTQGWPEQTEDLKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFNKDENG 532

Query: 284 ---LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
              +P      +       G+K+SKS GNV+DPI++I+                      
Sbjct: 533 KSQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAK 592

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D   L+     +  N + N  S
Sbjct: 593 KIEKNTRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-AS 649

Query: 364 RSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           R V M  +++D  +           F+ +D+ I S      +E   ++ N  +  A   +
Sbjct: 650 RYVLMNTEEHDCGMSLSAEERASLEFSLADKWIESQFELAAKEFNAHLDNFRLDMAANTL 709

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              +     D Y +  KP  L K    +     Y+ + V+ +   L    +P +   I+ 
Sbjct: 710 YEFIWNQFCDWYLELTKP-VLWKGTEAQQQATRYMLITVLEKTLRLAHPVLPYITESIWQ 768



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|229524486|ref|ZP_04413891.1| valyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338067|gb|EEO03084.1| valyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 953

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEAEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|307253150|ref|ZP_07535029.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859363|gb|EFM91397.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 948

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEAGNVYVARNEEEVRSKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 610 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E RE +       A   V         D Y +  KP     
Sbjct: 665 VEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAVYDFTWNEFCDWYLELTKPVFANG 724

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 725 TDAQKRGA-SQTLVRVLEKLLRLAHPIMPFITEEIWQ 760



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|303251669|ref|ZP_07337842.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302649511|gb|EFL79694.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 954

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEAGNVYVARNEEEVRSKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E RE +       A   V         D Y +  KP     
Sbjct: 671 VEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAVYDFTWNEFCDWYLELTKPVFANG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 731 TDAQKRGA-SQTLVRVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|256061831|ref|ZP_05451966.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325835|ref|ZP_05965032.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301815|gb|EEY05312.1| leucyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 877

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    +     + +S D      T +  ++   ++L+  I +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDIYEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 75/384 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGGDARRET------------DTMDTFVDSSWYYTRFTAPWENEPTDRKAADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGVDEPFKGLFTQGMVVHETYKANGQWVSPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEEIDGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFVLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G +          I  LV+ +    LKD      T G      ++     
Sbjct: 661 PERDVIWTEAGAEGAHR--FVQRIWRLVAEAAP-ALKDVAPKAGTQGEALGVSKA----A 713

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++ + ++++    +R +A++  LV+ +               +    + +     E 
Sbjct: 714 HKAVKAVGDDIEKLAFNRGVARLYELVNTLSGALQQAA-------DGKADAEMKGALREA 766

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              L ++    +P LA +    L 
Sbjct: 767 TEMLVLMTAPMMPHLAEQCLAELG 790


>gi|190150831|ref|YP_001969356.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264181|ref|ZP_07545773.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|254783547|sp|B3GYI3|SYV_ACTP7 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189915962|gb|ACE62214.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870472|gb|EFN02224.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 954

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEAGNVYVARSEEEVRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E RE +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GTEAQKRGASQTLVRVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 21/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G         
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                          +A  N     K +                I +D    T ++   +
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRL-GNSIDWDREHFTMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 158 AVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|15642499|ref|NP_232132.1| valyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153822412|ref|ZP_01975079.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227082622|ref|YP_002811173.1| valyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507439|ref|ZP_04396944.1| valyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509636|ref|ZP_04399117.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229516761|ref|ZP_04406207.1| valyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606945|ref|YP_002877593.1| valyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254851048|ref|ZP_05240398.1| valyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744518|ref|ZP_05418470.1| valyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262154658|ref|ZP_06028784.1| valyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|298500666|ref|ZP_07010470.1| valyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|12585350|sp|Q9KP73|SYV_VIBCH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|9657085|gb|AAF95645.1| valyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126520055|gb|EAZ77278.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227010510|gb|ACP06722.1| valyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229345824|gb|EEO10796.1| valyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353110|gb|EEO18049.1| valyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229354944|gb|EEO19865.1| valyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229369600|gb|ACQ60023.1| valyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846753|gb|EET25167.1| valyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738043|gb|EET93436.1| valyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030498|gb|EEY49136.1| valyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297540835|gb|EFH76892.1| valyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 953

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|298674281|ref|YP_003726031.1| valyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287269|gb|ADI73235.1| valyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 871

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/465 (13%), Positives = 142/465 (30%), Gaps = 27/465 (5%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
               G  +             +  +      +       + D++      T  +      
Sbjct: 254 DTSFGTGVVMICTFGDKQDVRWCVKYDLPVRKAINKNGRMTDVAGKYSGMTISECKDAIT 313

Query: 107 RILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE-- 162
           + L     +  +  + +     W         ++ + +   +    +   + V W  E  
Sbjct: 314 QELSDKGHLYQQETLEQNVGLCWRCKTPIEILSEPQWFVSVNDDEIHNTADEVNWHPEYM 373

Query: 163 -EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT------FD 215
                      +       +      +P+   N+    + +  + L L           +
Sbjct: 374 KTRLKNWTDVMEWDWCISRQRVFATPIPVWYCNKCGETMVAKEEWLPLDPIQTEPPEPCN 433

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G    +    ++  W+D+    L  +G+L           P  +   G DILR  A Y 
Sbjct: 434 CGSTDFEPENDVLDTWMDSSLTALHVSGWLS----EHELRLPTQIRPQGHDILRTWAFYT 489

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +    P    + +   +   G K+SKS GN+I P EV+ + G DA R +     
Sbjct: 490 ILRTKAIKGIKPWEFILVNGMVLGEDGHKMSKSQGNIISPDEVVGQYGADAFRQWGAVGG 549

Query: 334 ACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             G D  +    +    R    + +     ++     +    D    +    +  D+ +L
Sbjct: 550 TPGSDVMFRWKDVVSASRFMQKVWSIYRFSMTHLEEFVPDSSDMAQISQENLSLVDKWLL 609

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  +++++ +  +M   L   A   + +   E   D Y +  K   L   +P+       
Sbjct: 610 SKLNKLIESVTTSMDKLLFDEAYKSMRTFAWEVLADNYLELVKS-RLYGKDPESRKAAQT 668

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRL 493
                I  L  +L    P  A +++          + +  +++ L
Sbjct: 669 TLYYAIDTLIHVLAPITPFFAEEMYSRFKEGSVHEQSWPEVNELL 713



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG      
Sbjct: 32  QSRPQYIIDTPPPYPTGNFHIGNALNWCYIDFIARYKRMRGYNVMFPQGWDCHGLPTEVK 91

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     T             K    QN    R+    L  S D  +   T E  +    
Sbjct: 92  VEELHGITKNEVSRAEFRKMCKDLTSQNIEKMRETMMRLGFSIDWNNEFVTMEPEYFVKT 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           +  + ++ D   IY+  Y   +  R E      EV   
Sbjct: 152 QKSFVQMYDINRIYQSDYPVNWCPRCETAIALAEVEYD 189


>gi|260774879|ref|ZP_05883780.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609134|gb|EEX35292.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 857

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    ++   +L + YD      T    ++   +  + K+ +KG +Y
Sbjct: 91  VKNNTAPAPWTYENIEYMKNQLKMLGLGYDWNREFATCTPEYYRWEQEFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y  +L+   
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVVDG----RGWRSGAIVEQKEIPQWFIKITEYAQELIDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLDGWPEMVKTMQRNWIGRSEG 229



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 112/319 (35%), Gaps = 78/319 (24%)

Query: 232 IDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWP--------AFL 279
               + Y          D     KA +W P D ++ G +    H +Y          A  
Sbjct: 492 FMESSWYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHACMHLLYSRFFHKLLRDAGY 551

Query: 280 LSANLPLPKKVFSHGFILH--------------------------KGE------------ 301
           ++++ P  K++   G +L                           KG             
Sbjct: 552 VTSDEPF-KRLLCQGMVLADAFSYENEKGGTEWVAPTDVTVERDGKGRITSAKDNTGRDV 610

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKS  N IDP E++++ G D +R F++          + + G++       A
Sbjct: 611 EHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQESGVEG------A 664

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRAL 414
           N     V + V+              A +   +++     + + ++ +++  +   + A+
Sbjct: 665 NRFLKRVWKLVNEHASKGAAEAVDTSALSSDQKALRRDVHKTIAKVTDDVARRQTFNTAI 724

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++ L++            +L K   + A     +  E ++ +  +L    P ++++++
Sbjct: 725 AAIMELMN------------KLAKAPQESAQD-RAILDEALKAVVAMLYPITPHISSEMW 771

Query: 475 DILFVAD-ENRCFQSLDQR 492
             L   D +N  + + D++
Sbjct: 772 VGLGETDIDNATWPTHDEK 790


>gi|153215708|ref|ZP_01950089.1| valyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114626|gb|EAY33446.1| valyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 953

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEAEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|66044339|ref|YP_234180.1| valyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503207|sp|Q4ZXI0|SYV_PSEU2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|63255046|gb|AAY36142.1| Valyl-tRNA synthetase, class Ia [Pseudomonas syringae pv. syringae
           B728a]
          Length = 948

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEVALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     K      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALKTFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|332040928|gb|EGI77298.1| leucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 903

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 6/218 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D+LAR  R+ G +VL   G D  G     AA 
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMLARSLRMKGHNVLMPMGWDAFGLPAENAAL 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y+
Sbjct: 98  KNGVPPAKWTYENIAYMKGQMQAMGLAIDWSREVATCDPTYYKWNQWLFLKMLEKGIAYR 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E  GY+ +++ Y ++LL + +
Sbjct: 158 KTQVVNWDPVDQTVLANEQVIDG----RGWRTGALVEKREIPGYYLKITDYAEELLDHVQ 213

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                       ++V    ++ +      R  F   IK
Sbjct: 214 LGNPKATLTGWPDKVRLMQENWIGKSEGVRFAFPHEIK 251



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/347 (12%), Positives = 113/347 (32%), Gaps = 34/347 (9%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++         +  + +         ++    G++ 
Sbjct: 499 GVVCPVCGKPAKRETDTMDTFVDSSWYFMRYCDPANAEQMVAGGADYWMPMNQYIGGIEH 558

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +    K     FWP D+  
Sbjct: 559 AILHLLYARFWTKVMRDLGLVKIDEPFTHLLTQGMVLNHIYSRRTEKGGKEYFWPHDVE- 617

Query: 263 IGKDILRFHAIYWPAFLLSANLP-LPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEV 320
                   H +     ++ A L      +     I ++G   +SKS  N +DP ++IE+ 
Sbjct: 618 --------HLLDGTGKIIGAKLKNAVGSLPVGTPIDYEGVGTMSKSKNNGVDPQDLIEKY 669

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D  R + +          ++   ++          +    ++  +M     +  +   
Sbjct: 670 GADTARLYTMFAAPPEATLEWNDTAVEGSHR--FLKRVWAFGAKLAAMDKSAAEASVAGK 727

Query: 381 GAFTESD-----ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +  + +     +++       L+++  + Q    +  ++ V+ +++ ++ +        
Sbjct: 728 QSLKDVEFGPQAKALRFELHSALKQVDYDYQRMQYNTVVSGVMKMLNALESF-------- 779

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             K +    + V    +E    L   L    P + + +++ L  A +
Sbjct: 780 --KGHGSPGADV--ALIEGFSILLRCLYPATPHITHVLWEELGYAGQ 822


>gi|262401794|ref|ZP_06078359.1| valyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351766|gb|EEZ00897.1| valyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 953

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|229527561|ref|ZP_04416953.1| valyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229335193|gb|EEO00678.1| valyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327484991|gb|AEA79398.1| Valyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 953

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|146328949|ref|YP_001209169.1| leucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166231604|sp|A5EWD6|SYL_DICNV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146232419|gb|ABQ13397.1| leucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 867

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  QKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  QN    +     L   I +   I T    ++   + L+ ++  KG IY
Sbjct: 91  MKNQVAPAQWTYQNIAEMKKQLQSLGFAIDWSREITTCRPDYYRWEQWLFTRLYQKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   Y+FR++ Y ++LL+  
Sbjct: 151 RKLGAVNWDPVDQTVLANEQVIDG----RGWRSGAIVEKREIPMYYFRITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           E    +   ++           G+
Sbjct: 207 EQLDGWPERVKMMQRNWIGKSRGM 230



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 102/320 (31%), Gaps = 46/320 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            F   S YQ + +S +              + +     G++   L      +  K+  D 
Sbjct: 503 TFVESSWYQFRYMSPHYQKGMLDPEEVAYWQDVDQYIGGIEHAILHLLYARFFTKLLRDE 562

Query: 225 QYI-MYVWIDALTNYLTT---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
             +        L         T Y +   GSK  F PAD+ V   D             +
Sbjct: 563 GLVHTDEPFKKLLTQGMVLAGTWYREQEHGSKIWFNPADVQVKTDD----------KGRI 612

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              + L          +    K+SKS  N +DP  +I+  G D  R + +          
Sbjct: 613 IGGVLLSDGKPVQYGGME---KMSKSKNNGVDPQALIKTYGADTARLYTMFTAPPEASLE 669

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRV 397
           + + G++         G    + R  +   + +   I  P       E  ++I       
Sbjct: 670 WSESGVE---------GAYRFLRRLWAYCYE-FRHSIAKPSEVVPLNEKHQNIRREIHEQ 719

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L+  R + +    +  ++  + L + ++            +  PD  +    +  E +R 
Sbjct: 720 LRAARFDYERNQFNTVVSAGMKLFNCLN------------EIEPDYDA----LRREGVRI 763

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L ++L   VP +   ++  L
Sbjct: 764 LLLILSPIVPHITETLWQAL 783


>gi|296160453|ref|ZP_06843269.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889202|gb|EFG69004.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 863

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 6/199 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     
Sbjct: 29  VTDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG 
Sbjct: 89  AAMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+
Sbjct: 149 AYKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLN 204

Query: 179 YYESHPEFILPIERRNEVI 197
             E           +   I
Sbjct: 205 DLEGLGWPERVKIMQQNWI 223



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++         G   
Sbjct: 622 EKMSKSKNNGVDPQLLIDQHGADTARLFVMFAAPPEQSLEWSGSGVE---------GASR 672

Query: 361 LVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    +   +           ++ ++ +      VL++   + Q    +  ++ 
Sbjct: 673 FLRRVWSFSQTNEAALRQGGRFDAAQLSDVEKVLRREIYTVLKQADFDYQRLQYNTVVSA 732

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  E    +  +L   VP L  +++  
Sbjct: 733 AMKMLNALD----------------SAKGARPAVLRETCSVMLRVLYPVVPHLTFQLWRE 776

Query: 477 LFVADE 482
           L  ADE
Sbjct: 777 LGYADE 782


>gi|296109702|ref|YP_003616651.1| valyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434516|gb|ADG13687.1| valyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 878

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 142/398 (35%), Gaps = 17/398 (4%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                + +      K  I       W+    +      EV +       + +   + W+E
Sbjct: 328 QEKIKQNVGVCWRCKTPIEIVVTEQWFVNVKKLLPKVREVAEKIKWVPEHMKIRLLNWIE 387

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              + + +S  +         + +    I    E    V    +     R     G    
Sbjct: 388 NMDWDWVISRQRIFATPIPVWYCQDCGAIVVAKEEDLPVDPTERGYVCDRC----GSTNL 443

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFL 279
                ++  W+D+    +  T +LD+ +  K K +P  L   G DI+R  A Y    +  
Sbjct: 444 KPETDVLDTWMDSSITPMVITKWLDDEEFFK-KHYPVQLRPQGHDIIRTWAFYTIVKSLA 502

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+   P  + V +       G K+SKS GNV++P E++ + G DALR +       G D 
Sbjct: 503 LTGKEPWEEIVINGMVFGEDGYKMSKSRGNVVEPDEIVNKYGADALRLW-ASNSVIGDDV 561

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRV 397
            +    +           + N   R   + +KD +              D  ILS   R+
Sbjct: 562 PFSWKEVD--YGYRFLRKLWN-ACRFAKLHIKDEEIEKLKEKREVKNIIDRWILSKLQRL 618

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++ + ++++    +  + ++   V     D Y +  K + L   +        Y    VI
Sbjct: 619 IERVDKDLERYRFN-VIVEIYKFVWHEFCDNYIEMVK-YRLYGEDEKEKEEAKYTLYYVI 676

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            ++  LL  F P  ++ + +I  + + +  F  +D+ L
Sbjct: 677 DKILRLLAPFAPHFSDYVGEIYRLDNLHFSFPEVDKEL 714



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I T   YP  + H+GHA      D++AR+ R+ G +VLF  G D HG      
Sbjct: 29  SDKPPYIIDTPPPYPTGKLHLGHALNWTYMDIIARYKRMKGYNVLFPQGWDCHGLPTEVK 88

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                 +N    R+    L IS D      T   ++ +  
Sbjct: 89  VEEIHGITKTDIDRKKFRELCVELTKKNIERMREQIKSLGISIDWSREYITMTPKYIEKS 148

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           ++ + ++   G IY+G +   +  R +      EV       Y N    P
Sbjct: 149 QVAFVRMYKDGLIYRGKFPVNWCPRCQTAIAFAEVEYIERETYLNYIKFP 198


>gi|255038409|ref|YP_003089030.1| isoleucyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951165|gb|ACT95865.1| isoleucyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 1143

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 67/417 (16%), Positives = 134/417 (32%), Gaps = 35/417 (8%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           FIRTT        +    +++   +                + N  E     +       
Sbjct: 467 FIRTT------AVKDRLVELNKSINWKPEST------GTGRFGNWLENLVDWNLSRSRYW 514

Query: 154 HNPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             P+        +E     +   +D L     S           +E +  ++ G  DL  
Sbjct: 515 GTPLPIWRNDYGDEVCVGSIEELKDLLEEAIISGHLTREQALHNSEYLQKLEHGDYDLHR 574

Query: 210 SRKTF-----DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                       G  +  +P  ++ VW D+         Y         K +PAD    G
Sbjct: 575 PYVDDVVLIGKTGHIMHREPD-LIDVWFDSGAMPYAQWHYPFENQEIFDKAYPADFISEG 633

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F  ++  A +L  ++     V +   +   G K+SK LGN +DP   + + G 
Sbjct: 634 VDQTRGWFFTLHAIAGMLFDSVAFKNVVSTGLVLDKNGNKMSKRLGNAVDPFATLAQYGP 693

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-- 380
           DA R++++       +  ++ DG+ +         +      ++   L  Y+        
Sbjct: 694 DATRWYMITNAEPWDNLKFNIDGIGEVQRKFFGTLVNTYNFFALYANLDGYEFHEANSVP 753

Query: 381 -GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF--DAQKPWE 435
               TE D  ILS  + +++E+ E   +    +A   V   V++   + Y   + ++ W 
Sbjct: 754 IEKRTELDRWILSKLNTLIKEVGEQFDDYNPTKAGRLVQDFVTDQLSNWYIRLNRRRFWN 813

Query: 436 LKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                     +  +         +  ++ L+    P     ++  L  +D     Q 
Sbjct: 814 PSAEQGAGLTEDKAAAYETLHHCLVTVSQLMSPIAPFFGEWLYKNLTDSDREASIQH 870



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
                       N  P I H     I D+  R+  L G  V    G D HG  +    + 
Sbjct: 39  PTFTFFEGPPSANGTPGIHHVMARAIKDIFCRYKTLQGFQVKRKGGWDTHGLPVELQVEK 98

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 +  V + +  + D+ + +   +  DD   T +  + ++
Sbjct: 99  ELGIIKDDIGKKISVADYNEKCRQTVMKFTDQWNDLTEKMGYWVDLDDPYITYKSEYIES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              L KK+ DKG +YKG     YS       +  E+  
Sbjct: 159 LWNLLKKLYDKGLLYKGYTIQPYSPAAGTGLSSHELNM 196


>gi|227504037|ref|ZP_03934086.1| valyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199367|gb|EEI79415.1| valyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 941

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 132/417 (31%), Gaps = 37/417 (8%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           IR          + +   +   G   +        L  + +    E      G       
Sbjct: 358 IREALAEQGRIVKEIRPYVHSVGHSERSGEPVEPRLSLQWFVAV-EKLAKYSGDAVREGD 416

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             +     E  +F             +      +PI    E      +  +D+       
Sbjct: 417 TKIHPTSLEPRYFEWVDDMHDWCISRQLWWGHRIPIWYGPETTDAEGNTTRDIVCVGPDE 476

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
           +       DP  ++  W  +     +T G+ +       KF+P ++ V   DIL F    
Sbjct: 477 EPPAGYEQDPD-VLDTWFSSALWPFSTLGWPEKTP-DLEKFYPTNVLVTAYDILFFWVAR 534

Query: 275 WPAFLLSANLPLPK--------------KVFSHGFIL------HKGEKISKSLGNVIDPI 314
              F   A +  P+              ++  H   L       +G K+SKSLGN IDP+
Sbjct: 535 MMMFGTFAGVQTPELLNAGDGSARDGRPQIPFHDIYLHGLVRDEQGRKMSKSLGNGIDPM 594

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + + + G DALR+ L R    G D     D      N   A  + N  ++   M      
Sbjct: 595 DWVRDYGADALRFTLARGANPGVDLPLGSDAAAASRN--FATKLFN-ATKFALMNGAGV- 650

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
             +P     T++D  IL     V  +    + +    +A   +   + +   D Y +  K
Sbjct: 651 AELPAREELTDADRWILDRAEEVRVKFDAYLDDYQFSKANELLYHYIWDELCDWYLEIAK 710

Query: 433 ---PW---ELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              P      + ++ +R        V   V+  +  LL   +P +   ++  L   +
Sbjct: 711 SQIPRDFDAAETSDAERLTGHNTQIVLGRVLDVVLRLLHPTMPFVTEVLWKALTGGE 767



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 66  SEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTK 125

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T          + F+ +                R + D +D S + F  T ++
Sbjct: 126 VEAKLKETEGKKRWDYEREEFISKVWEWKEEYGGTIQKQMRAIGDSVDWSRERF--TLDE 183

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D G IY+      +S   E   +D EV  
Sbjct: 184 GLSRAVQTIFKQLFDAGMIYQAHRLVNWSPVLETAVSDIEVVY 226


>gi|189083249|sp|Q0VN53|SYL_ALCBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 815

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  SKEKFYCLSMFPYPSGRLHMGHVRNYSIGDVVSRYQRMLGKNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R     L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 91  IKNKVAPAKWTFENIDYMRGQLQRLGFGYDWGRELATCTPEYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 RKMSTVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DQLDGWPEQVKTMQRNWIGRSEG 229



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 110/277 (39%), Gaps = 38/277 (13%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y              D +   +W P D ++ G +    H +Y   F        
Sbjct: 492 FMESSWYYARYCSPQSDTAMLDPAATNYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDTG 551

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P  K++   G +L  G K+SKS GN +DP ++IEE G D +R F++      + 
Sbjct: 552 LVNCDEPF-KQLLCQGMVLKDGAKMSKSKGNTVDPQQMIEEYGADTVRLFMMFAAPPEQS 610

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             ++  G++       A      + R V+  ++  +       A  ++ +++       +
Sbjct: 611 LEWNDAGVEG------AFRFIKRLWRLVAEHVEAGNTGTLDVNALDDAGKALRRKTHETI 664

Query: 399 QEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
           Q++ ++   +   + A+A V+ L++EV + FDA     L  K     A+ +L        
Sbjct: 665 QKVSDDYGRRNTFNTAIAAVMELINEVSK-FDAATDNALAVKQEALEAAVLLLA------ 717

Query: 457 QLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
                    +P   + ++  L   +   +  + S+D+
Sbjct: 718 -------PIIPHAGHSLWQALGHDEAVIDASWPSVDE 747


>gi|114705824|ref|ZP_01438727.1| leucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538670|gb|EAU41791.1| leucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 871

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 84/235 (35%), Gaps = 9/235 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+ + H+GH     + DV+AR+ R  G +V+   G D  G     AA  
Sbjct: 34  EKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAQGFNVIHPMGWDAFGMPAENAAMQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +  +N  + R     + +S D      T +  ++   ++L+    D G  Y+ 
Sbjct: 94  NKVHPAKWTYENIASMRTQLKSMGLSLDWSREFATCDVEYYHRQQMLFLDFLDAGLAYRK 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     +++V  G            V+  E   +FF+++ + + LL   + 
Sbjct: 154 KSKVNWDPVDMTVLANEQVEDG----RGWRSGALVEQRELTQWFFKITDFAEDLLQALDH 209

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            P +   +    +       GL          + G     D   +     D L  
Sbjct: 210 LPNWPEKVRLMQKNWIGKSEGLMVRW---SLAEGGKPEGIDELTVFTTRPDTLFG 261



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 17/195 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G +          +  
Sbjct: 627 EKMSKSKKNVVDPEDIIGRFGADTARWFVLSDSPPDRDVIWTEAGAEGAFR--FVQRLWR 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVS +   +     G +  P A    D  I     R    ++ +++    ++A+A++  L
Sbjct: 685 LVSEAAPHVAG--TGAVSDPEAQPGLD--IRKAAHRAAHGVQTDIERLGFNKAVARIHEL 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+ +                    +         +  L  L+   +P LA + + +L   
Sbjct: 741 VNALAGPLSEI---------GKADANTKAAAAAALDMLVRLIAPMMPHLAQECWTLLGHE 791

Query: 481 D--ENRCFQSLDQRL 493
           D    + + ++D  L
Sbjct: 792 DFVSAQSWPAVDAGL 806


>gi|85060089|ref|YP_455791.1| valyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|84780609|dbj|BAE75386.1| valyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 951

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 131/398 (32%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M    ++ R +      +   E      +P    N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTNQWYVRTAPLAKVAVEAVEQGEIQFVPKHYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDAEGRVYVGRREVEVRQQHRLGDDVTLRQDDDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRTFH-PTSVVVSGFDIIFFWIARMIMLTMHFIKDDNGKPQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLADLVQKRTDNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFHGGD 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 KVLSLADCWILAEFNQTVKAFREALDNYRFDLAAGILYEFTWNQFCDWYLELTKP-VMSG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+  L  L    +P +   I+  
Sbjct: 727 GSDAELRGTRHTLVTVLEALLQLAHPIIPFITETIWQR 764



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 25/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIA 95

Query: 68  TTK----------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +           F+D+  +             R + D +D     F  T ++   +  
Sbjct: 96  AEEGKTRHDYGRDAFIDKIWQWKAQSGGTITHQMRRLGDSVDWERKRF--TMDEGLSNAV 153

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ ++ ++  IY+G     +  +     +D EV              P+
Sbjct: 154 KEVFVRLYEEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPL 204


>gi|27364858|ref|NP_760386.1| valyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37681094|ref|NP_935703.1| valyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155249|ref|YP_004187628.1| valyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|81448661|sp|Q8DCE7|SYV_VIBVU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81756550|sp|Q7MHG1|SYV_VIBVY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27361003|gb|AAO09913.1| valyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37199844|dbj|BAC95674.1| valyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319930561|gb|ADV85425.1| valyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 951

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 95/560 (16%), Positives = 176/560 (31%), Gaps = 108/560 (19%)

Query: 36  RFHRLDGLDVLFTT--------GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           R+  L G D++           G +    +         +T     +      R    ++
Sbjct: 241 RYQDLIGKDIILPIVDRRIPIVGDEHADMEKGTGCVK--ITPAHDFNDYEVGKRHQLPMI 298

Query: 88  DI-SYDDFIR------TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +I ++D  IR      TT     D            G           +  DE    ++ 
Sbjct: 299 NILTFDANIRDAAEVFTTNGEPSDA-YGTELPAKYHGMERFAARKAIVAEFDELGLLEEV 357

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                   Y +     ++ M  + ++ R +      +   E+     +P +  N   S++
Sbjct: 358 KDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQYENMYFSWM 417

Query: 201 KSGLKDLSLSRKTFDWGIKIP------------------------------DDPQYIMYV 230
           +  ++D  +SR+   WG +IP                                 + ++  
Sbjct: 418 RD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRSEEEVRQNHNLESVIELHQDEDVLDT 475

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA-------- 282
           W  +      T G+ +  D  K    P+D+ V G DI+ F         +          
Sbjct: 476 WFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMHFVKDENGKP 534

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------------- 319
            +P      +       G+K+SKS GNV+DPI++I+                        
Sbjct: 535 QVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKI 594

Query: 320 --------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+ L    + G+D  +D   L+     +  N + N  SR 
Sbjct: 595 EKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRY 651

Query: 366 VSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-- 422
           V M  ++ D         ++ +D+ I S      +    ++ N  +  A   +   +   
Sbjct: 652 VMMNTEEQDCGFGAGEIEYSLADKWIESQFELAAKAFNNHIDNYRLDMAANTLYEFIWNQ 711

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----- 477
             D Y +  KP  L K    +        + V+ +   L    +P +   I+  +     
Sbjct: 712 FCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETIWQSIKPLVD 770

Query: 478 FVADENRCFQSLDQRLKPGF 497
            V  E    QSL Q  +  F
Sbjct: 771 GVEGETIMLQSLPQYDEANF 790



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|229827354|ref|ZP_04453423.1| hypothetical protein GCWU000182_02742 [Abiotrophia defectiva ATCC
           49176]
 gi|229788292|gb|EEP24406.1| hypothetical protein GCWU000182_02742 [Abiotrophia defectiva ATCC
           49176]
          Length = 1076

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 139/403 (34%), Gaps = 15/403 (3%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD----GQYYNAQH 154
            +        W+  S      K  +    + +RD+   N+ ++    +    G++ +   
Sbjct: 415 PKFEHEYPHCWRCDSPLIYYAKETWFIKMTAVRDDLLKNNAKINWIPENIGKGRFGDWLQ 474

Query: 155 NPVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           N   W       +   L A+  +    +    +  L     N             +++ K
Sbjct: 475 NVQDWGLSRNRYWGTPLPAWTCECGKVHVIGSKAELKEMSDNCPEDIELHRPFIDNVTIK 534

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             D G ++   P+ ++  W D+         Y         + +PAD      D     F
Sbjct: 535 CPDCGKEMHRVPE-VIDCWFDSGAMPYAQHHYPFENKELFEQQFPADFISEAVDQTRGWF 593

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + LL    P    +     +   G+K+SKS GN +DP E + + G DA+R++  
Sbjct: 594 YSLLAESTLLFNEAPYKNVIVLGHVLDENGQKMSKSKGNAVDPFEALAKHGADAIRWYFY 653

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT--PGAFTESD 387
              A      +  D L     +   + + N  +  V    + ++D              D
Sbjct: 654 ANSAPWLPNRFS-DKLVTEGQSKFMSTLWNTYAFFVLYANIDEFDATKYKLEYDKLAVID 712

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAST 446
           + +LS  +  ++ + +N+ N  I      +++ V E+ + Y    +     K        
Sbjct: 713 KWLLSKLNSTIKAVEDNLDNYRILETAKALLNFVDEMSNWYVRRCRNRFWAKGMEQDKIN 772

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                   + +++      +P +  +I+  L  + +    +S+
Sbjct: 773 AYLTLYTALVEISKAAAPMIPFMTEEIYQNLVRSIDKTAPESI 815



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 60  KDAPTYMFYDGPPTANGKPHIGHVETRVIKDMIPRYKTMKGYKVPRKAGWDTHGLPVEIE 119

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T     
Sbjct: 120 VEKLLGLNGKEQIEEYGMEPFIEKCKESVWKFKGMWEDFSGTVGFWADMDNPYVTYHDDF 179

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I  KG +YKG     Y  R     +  EV +G  
Sbjct: 180 IESEWWALKEIWKKGLLYKGHKIVPYCPRCGTSLSSHEVAQGYK 223


>gi|217076607|ref|YP_002334323.1| leucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036460|gb|ACJ74982.1| leucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 825

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SEKPKFYDLVMFPYPSGTLHVGHVKNYVIGDIVARYKRMKGFNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  +V+  +N    R+    + ISYD    I T  + ++   + L+ K+ +KG  
Sbjct: 89  AIKNKIHPEVWTFKNIETIRNQIKKIGISYDWKREIATCTEDYYKWTQWLFVKMYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    +++V  G            V     E ++F+++ Y ++LL+ 
Sbjct: 149 YKKKAAVNWCPSCQTVLANEQVVDGK----CERCGTEVTLKHLEQWYFKITDYAERLLND 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   +      +G
Sbjct: 205 LERLEGWPENVKTMQKNWIGKSTG 228



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 118/341 (34%), Gaps = 35/341 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E+ G            L                +E            
Sbjct: 427 QRYWGAPIPVVYCEKCGTVAVPEEQLPVKLPKDVEFLPTGQSPLSLDEQFLNTTCPKCGG 486

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+          D              Y+         +     +W P D ++ G +
Sbjct: 487 PARREA---------DTMDTFVDSSWYYLRYVNPNLEDKPFESKDVNYWLPVDQYIGGVE 537

Query: 267 ILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             +  + P    +F+ G I   G K+SKS GNV+ P ++IE
Sbjct: 538 HAVLHLLYSRFITKVLHDMGYVDFDEPFT-NLFTQGMIYKDGWKMSKSKGNVVSPDDMIE 596

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR +++      KD  +   G++          +  L +   S++ K  +    
Sbjct: 597 KYGADTLRTYILFMAPPEKDAEWSDAGIEGVH-----RFLKRLWNNIYSVLEKIKNVSAE 651

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                 + ++ +     + +++I E+++     + A+A ++ L    +  F       L 
Sbjct: 652 KIELKNKLEKDLRRKLHQSIKKITEDIEGGFKFNTAIAGLMEL----NNSFSD----YLN 703

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           KT     +  L +  E++ +LA++L  F P +A +I+  L 
Sbjct: 704 KTEEKDLN--LPLLRELVEKLALILSPFAPHMAEEIWHDLG 742


>gi|289668262|ref|ZP_06489337.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 880

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 80/196 (40%), Gaps = 27/196 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+    R    L   +
Sbjct: 637 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGVDGMARFMRRLWVQV 696

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
              V    +++L           A +   +++       + ++ ++   +   + A+A V
Sbjct: 697 HKHVGEGAAVVL--------DVAALSAEQKAVRRKTHETIGKVSDDYGRRHSFNTAIAAV 748

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + + ++ DA        ++  RA     V  E +  + +LL    P  ++ ++ +L
Sbjct: 749 MELSNALAKFDDA--------SDQGRA-----VRQEALEAMVLLLNPITPHASHALWQML 795

Query: 478 FVAD---ENRCFQSLD 490
              +   EN  F   D
Sbjct: 796 GRGETLLENVAFPQAD 811


>gi|313109428|ref|ZP_07795388.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310881890|gb|EFQ40484.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 887

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y  +   YP+ + H+GH     I DV++R+HR+ G +VL   G D  G     AA
Sbjct: 31  DKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +   D L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAAWTYDNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++ P +   ++           G+
Sbjct: 207 DNLPGWPEQVKTMQRNWIGKSRGM 230



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 80/197 (40%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++          +   G++         G   
Sbjct: 645 EKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVE---------GANR 695

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      A  ++ + +       +++  +++ Q+   + A+A 
Sbjct: 696 FLRRVWRLAHAHVSAGLPGALDVAALNDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIAA 755

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++             L+K  P++ +    +  E +  + +LL    P + + ++  
Sbjct: 756 VMTLMN------------VLEKA-PNQDAQDRALIQEGLETVVLLLAPITPHICHVLWGQ 802

Query: 477 LFVADENRC--FQSLDQ 491
           L  A+      + S+D+
Sbjct: 803 LGHAEAVIDARWPSVDE 819


>gi|189083216|sp|B0RR06|SYL_XANCB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 885

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTTGAAL----DPLRVFTTRPDTLMG 263



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 73/512 (14%), Positives = 147/512 (28%), Gaps = 93/512 (18%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQAWDATQWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDYHGAFEALAERFERKGQGQRRINYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       + G  
Sbjct: 455 CAKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+    +    +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                      
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIAETFYRDADNGGKDWINPADVEIQRDERGRVV 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GASLIADGQPVHIGGTEKMSKSKNNGVDPQAMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           G+    R    L   +   V      I  +   ++   G  +   ++I       + ++ 
Sbjct: 681 GVDGMARFMRRLWVQVHKHVG---EGIDDELTKIVALGGPLSAEQKAIRRKTHETIGKVD 737

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L +             L K +   A     V  E +  + +L
Sbjct: 738 DDYGRRHSFNTAIAAVMELSNA------------LAKFDDASAQG-RAVRQEALEAMVLL 784

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   EN  F  +D
Sbjct: 785 LNPITPHASHALWQVLGRGETLLENVPFPQVD 816


>gi|170723401|ref|YP_001751089.1| valyl-tRNA synthetase [Pseudomonas putida W619]
 gi|169761404|gb|ACA74720.1| valyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 948

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 126/403 (31%), Gaps = 89/403 (22%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDEAGQVYVGRNEAEVRAKHNLGADVVLRQDDDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +  +  K      D+ V G DI+ F         +           +P           
Sbjct: 487 PEQTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFPEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   ++      A   +   +     D Y +  KP  L
Sbjct: 661 EAYELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKP-VL 719

Query: 437 KKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              N   +RA       V V+     L   F+P +  +I+  +
Sbjct: 720 WDENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRI 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK------- 60
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G            
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 61  ------------AAQNAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                       A  +     K     N  R  R +   +D S + F  T +    +  +
Sbjct: 94  AKGQNRHDLGRDAFLDKVWEWKEQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|153801097|ref|ZP_01955683.1| valyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123330|gb|EAY42073.1| valyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 953

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|227503056|ref|ZP_03933105.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49725]
 gi|227076117|gb|EEI14080.1| valine--tRNA ligase [Corynebacterium accolens ATCC 49725]
          Length = 936

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 76/455 (16%), Positives = 137/455 (30%), Gaps = 30/455 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD-FIRTTEKRHHDTC 106
            T   +          N  + T +    +  +     D +        IR   +      
Sbjct: 317 ITPAHDPNDYAMGTRHNLDMPTVMDTTGHIAHTGTRFDGMTREDARVEIREALREQGRIL 376

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +   +   G   +        L  + + +  +    A G         +     E  +
Sbjct: 377 KEIRPYVHSVGHSERSGEPIEPRLSLQWFVDVAQ-MAKASGDAVREGDTVLHPQSLEPRY 435

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F             +      +PI    E  +      +D+       +       DP  
Sbjct: 436 FEWVDDMHDWCISRQLWWGHRIPIWYGPERTNESGEVERDIVCVGPDEEPPAGYEQDPD- 494

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--- 283
           ++  W  +     +T G+ D       KF+P ++ V   DIL F       F   A    
Sbjct: 495 VLDTWFSSALWPFSTLGWPDKTP-DLEKFYPTNVLVTAYDILFFWVARMMMFGTFAGTKT 553

Query: 284 -------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                        +P             +G K+SKSLGN IDP++ + + G DALR+ L 
Sbjct: 554 PELLGQGTDGRPQIPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADALRFTLA 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDE 388
           R    G D     D      N   A  + N    +    L +  G+ P P     +++D 
Sbjct: 614 RGANPGVDLPLGSDAAAASRN--FATKLFN----ATKFALMNGAGVAPLPKRTELSDADR 667

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            IL     V  ++   + +    +A   +     +   D Y +  K    +         
Sbjct: 668 WILDRAEEVRTQVDAYLDDYQFAKANELLYHFTWDELCDWYLEIAKTQIPRDGETVEGRN 727

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              V   VI  +  LL   +P +   ++  L   +
Sbjct: 728 TQIVLGRVIDVVLRLLHPTMPYVTEVLWKALTGGE 762



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 73  SEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTK 132

Query: 62  AQNA----------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+D+                R + D +D + + F  T ++
Sbjct: 133 VEARLREQEGKKRWDYEREEFIDKVWEWKEQYGGTIQNQMRAIGDSVDWTRERF--TLDE 190

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D+G IY+      +S   E   +D EV  
Sbjct: 191 GLSRAVQTIFKNLYDEGMIYRANRLVNWSPVLETAVSDIEVVY 233


>gi|269467856|gb|EEZ79599.1| valyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 915

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/451 (16%), Positives = 153/451 (33%), Gaps = 85/451 (18%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + +  DT    +  +               +  D     +          + +  H
Sbjct: 294 ILTDDAKIKDTVDSAYVGMDRFEARK-----QIVTDLDGQGLIEKIEPHKLMVPHGDRTH 348

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + +F +++      +   ++     +P    N+        ++D  +SR+  
Sbjct: 349 AVIEPYMTDQWFVKIAPLAQPAIDAVKNGDIRFIPENW-NKTYFNWMDNIQDWCISRQ-I 406

Query: 215 DWG--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLD 246
            WG  I    D                             ++  W  +     +T G+ D
Sbjct: 407 WWGHRIPAWYDNDGNIFVANSLKEAQEQAGEGTKLRQDEDVLDTWFSSALWPFSTLGWPD 466

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 ++F+P D+ V G DI+ F    +       +  +P      +      +G+K+S
Sbjct: 467 KTP-ELSRFYPTDVLVTGFDIIFFWVARMIMFGLKFTGEVPFKDVYITGLIKDGQGQKMS 525

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 526 KSKGNVLDPIDLIDGISLEDLLTKRTQGMMQPKMAEKIKKQTKQEFADGIPAFGTDALRF 585

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 + G+D  +D   ++     +  N + N  SR V M L+     I T  + + +D
Sbjct: 586 TFAALASFGRDIKFDLKRVEG--YRNFCNKLWN-ASRFVLMKLE--GEAINTNASLSIAD 640

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
           E ILS        + +++ +  +     ++   V     D Y +  KP  + ++     +
Sbjct: 641 EWILSRLQATKVNVEKHLSDYRLDLMSHELYEFVWHDYCDWYLELSKPLLVNESTK---A 697

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                 V+V+ ++  LL   +P +  +I++ 
Sbjct: 698 GTQATLVKVLDEMITLLHPIIPFITEEIYEQ 728



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 24/175 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
              +  PN     H+GHA++  I DVL R+HR  G   L+  GTD  G       +    
Sbjct: 37  CIMLPPPNVTGSLHMGHAFQHTIMDVLTRYHRGKGEQTLWQPGTDHAGIATQMVVERQLA 96

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       +   R +   +D   + F  T ++   D  +
Sbjct: 97  AQDITRHDVGREKFIDKIWDWKEQSGGTITSQMRRLGASVDWERERF--TMDEGLSDAVK 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ ++ D+G IY+G     +        +D EV    +         P+   +E
Sbjct: 155 KVFVQLHDEGLIYRGKRLVNWDPVLHTAVSDLEVISVEEQGSLWHMRYPITDTDE 209


>gi|189083215|sp|Q4UWK8|SYL_XANC8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 879

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTTGAAL----DPLRVFTTRPDTLMG 263



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 71/512 (13%), Positives = 145/512 (28%), Gaps = 99/512 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQAWDATQWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDYHGAFEALAERFERKGQGQRRINYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       + G  
Sbjct: 455 CAKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+    +    +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                      
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIAETFYRDADNGGKDWINPADVEIQRDERGRVV 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GASLIADGQPVHIGGTEKMSKSKNNGVDPQAMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           G+    R    L   +   V    + +            + +   ++I       + ++ 
Sbjct: 681 GVDGMARFMRRLWVQVHKHVGEGAAAL---------DVASLSAEQKAIRRKTHETIGKVD 731

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L +             L K +   A     V  E +  + +L
Sbjct: 732 DDYGRRHSFNTAIAAVMELSNA------------LAKFDDASAQG-RAVRQEALEAMVLL 778

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   EN  F  +D
Sbjct: 779 LNPITPHASHALWQVLGRGETLLENVPFPQVD 810


>gi|15967084|ref|NP_387437.1| leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302546|ref|ZP_07582303.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307316123|ref|ZP_07595567.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|32171577|sp|Q92KW8|SYL_RHIME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15076357|emb|CAC47910.1| Probable leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306897963|gb|EFN28705.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306903216|gb|EFN33806.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 876

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +    V+ +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKVMGLSLDWSREFATCDPEYYQRQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V +G            V+  E   +FFR++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIEG----RGWRSGALVEQRELTQWFFRITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  E+   +    +       GL    
Sbjct: 209 TLDEWPEKVRLMQKNWIGRSEGLSVRW 235



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 41/362 (11%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQWMEEEGYFF-RLSAYQDKLLSYYESHPEFILPIERRNE 195
               V     G+    + + +    +  ++F R +A  +   +  ++   ++   +    
Sbjct: 486 TWRHVACPQCGKDARRETDTMDTFVDSSWYFTRFTAPWEDNPTDPKAANHWLPVDQYIGG 545

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R     G    D+P   ++         +    Y       +   
Sbjct: 546 IEHAILHLLYSRFFTRAMKATGHVALDEPFKGLFTQ-----GMVVHETYSRGEGAQREWI 600

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            PA++ V   D  R       A  +     +          +   EK+SKS  NV+DP +
Sbjct: 601 TPAEIRVEEVDGQR------RAVHIETGEEV---------AIGSIEKMSKSKKNVVDPDD 645

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I   G D  R+F++ +    +D  + + G++         G    V R   ++ +  + 
Sbjct: 646 IIGSYGADTARFFVLSDSPPDRDVIWSEAGVE---------GAHRFVQRVWRLLTEAAER 696

Query: 376 MIPTPGAFTESDESIL--SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +     A     E +       R L+ +  +      ++A+A++  LV+          P
Sbjct: 697 LRAVDAAPASGGEGLAVSQAAHRTLKAVEADYDKLAFNKAVARIYELVNA------MAAP 750

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
                +     + +     +    L  L+   +P LA + +  +        R +   D 
Sbjct: 751 LTQVASGKAD-NALTAAVKDAAAILINLIAPMMPHLAEECWREIGGKGLIAERPWPKFDP 809

Query: 492 RL 493
            L
Sbjct: 810 AL 811


>gi|297537354|ref|YP_003673123.1| valyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297256701|gb|ADI28546.1| valyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 944

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 108/306 (35%), Gaps = 56/306 (18%)

Query: 224 PQYIMYVWIDALTNYLTTTGY-----LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
              ++  W  +     +T  +     +D  + +  ++ P+ + V G DI+ F    +   
Sbjct: 466 DNDVLDTWYSSALWPFSTLDWTGDEAIDAQNQALQQYLPSSVLVTGFDIIFFWVARMVMM 525

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------- 319
              ++  +P             +G+K+SKS GNV+DPI++I+                  
Sbjct: 526 TKHITGKIPFKHVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGIGLDDLIKKRTTGLMNP 585

Query: 320 --------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
                                G DALR+      + G+D  +D          +  N + 
Sbjct: 586 KDAEKIEKRTRKEFPEGIAAYGTDALRFTFAALASPGRDIKFDLQRCDG--YRNFCNKLW 643

Query: 360 NLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           N  +R V M  +  D              F+++D  I+S+  R   E+ +  ++     A
Sbjct: 644 N-ATRFVLMNTEGQDNGFDAASCGEGGRKFSQADRWIVSILQRTEAEVEKAFEDYRFDLA 702

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +   V +   D Y +  K       + ++ +T     + V+  +  L    +P +  
Sbjct: 703 AKAIYEFVWDEYCDWYLELAKVQIQNGDDAEKRAT-RRTLLRVLETILRLAHPIMPFITE 761

Query: 472 KIFDIL 477
           +I+  +
Sbjct: 762 EIWQTI 767



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           ++   I           H+GH +   + D L R+HR+ G + L+  GTD  G        
Sbjct: 45  KDNFCILLPPPNVTGTLHMGHGFNQTLMDALTRYHRMKGDNTLWQPGTDHAGIATQIVVE 104

Query: 60  ---------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                          +         K +     ++  R +    D S + F  T ++  +
Sbjct: 105 RQLDAQGVSRHDLGREKFLEKVWEWKEYSGGTITKQMRRLGTSPDWSRERF--TMDEGLN 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            T    + ++ ++G IY+G     + ++     +D EV +  +  +    + P+
Sbjct: 163 KTVTETFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQEEEDGFMWHINYPL 216


>gi|206891188|ref|YP_002249023.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206743126|gb|ACI22183.1| leucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 868

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++K Y      YP+ + H+GH     I DV+AR+ R+ GL VL   G D  G     A
Sbjct: 30  SSKQKFYCLEMFPYPSGRIHMGHVRNYAIGDVIARYKRMKGLKVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    ++    L +SYD    + T    ++   + ++ K+ ++G  
Sbjct: 90  AIKHGVHPAKWTYENIDYMKNQLIKLGLSYDWRREVTTCSPEYYKWNQWIFLKLYERGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  GA           V+  E E +F +++AY ++LL  
Sbjct: 150 YRKSSFVNWCPSCATVLANEQVIDGA----CWRCETQVEQKELEQWFLKITAYAEELLKD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 206 CDRLTGWPEKVLTMQRNWIGKSEG 229



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 132/413 (31%), Gaps = 84/413 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E+ G           +L    S         +  E     K 
Sbjct: 411 WGISRQRYWGTPIPIIYCEKCGIVPVPEKDLPVILPENISLTGKGESPLKYVEEFYKTKC 470

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                   R+T         D              Y +              + P D ++
Sbjct: 471 PRCGKEARRET---------DTMDTFVDSSWYFVRYCSLQNEDAFHKEKIKYWMPVDQYI 521

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPL----------------PKKVFSHGFILH 298
            G +    H +Y   F        ++  + P                 P+  +     + 
Sbjct: 522 GGIEHAVLHLLYARFFTKVLRDIGIVPFDEPFERLLTQGMVCMESYRCPEHDYLFPKEVK 581

Query: 299 KGE--------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            G+              K+SKS  N+IDP E+IE+ G D +R F +      KD  +   
Sbjct: 582 DGKCIHCGSSVTVGRVEKMSKSKKNIIDPDEMIEQYGTDTVRVFTLFAAPPEKDLEWSSQ 641

Query: 345 GLKKRVN-----ADLANGIGNLVSR---------SVSMILKDYD---GMIPTPGAFTESD 387
           G++           L       +           S+ M  + +        +    +ES+
Sbjct: 642 GVEGAHRFLKRVYALIFKHNKWIREIHISESEASSIGMTEEGHAEPAFYCHSEPKRSESE 701

Query: 388 ES----ILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           ES    I+S+  R ++ +  +++     + A+A+++  V+EV  Y    +P    KT  +
Sbjct: 702 ESPISPIISLIHRTIKRVTLDIEKEYQFNTAIARLMEFVNEVYGY----EP----KTEEE 753

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
           R      V    IR   ILL  F P +A +++  +       N  + + D+ L
Sbjct: 754 RK-----VFKFAIRNFLILLSPFAPHIAEELWREIGEEGFILNEPWPTYDEAL 801


>gi|190575352|ref|YP_001973197.1| leucyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229470711|sp|B2FPR7|SYL_STRMK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190013274|emb|CAQ46908.1| putative leucyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 880

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + R     +   + +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAAWTYKNIEHMRGQFKAMGYAVDWSREFATCRPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDELDGWPDSVKTMQRNWIGRSEGL 234



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 65/513 (12%), Positives = 153/513 (29%), Gaps = 96/513 (18%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            G           H Q+  + A   G+  K  +        D        + D+     +
Sbjct: 336 MGYGTGAVMAVPGHDQRDNEVANKYGLPIKQVIALKDPRNDDERTWDGARWQDWYSDKNR 395

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                    +  +  +G             + +   N      G   Q Y     PV + 
Sbjct: 396 AFELVNSAEFDGLDFQGAFEALAERFERKAQGQRRVNYRLRDWGVSRQRYWGCPIPVIYC 455

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           ++ G           +L    +      PI+   E            +  R+T  +    
Sbjct: 456 DKCGAVPVPEEQLPVVLPEDVAFSGTGSPIKTDPEWRKTTCPE-CGGAAERETDTF---- 510

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWP-- 276
                     ++++   Y   T         K   +  P D ++ G +    H +Y+   
Sbjct: 511 --------DTFMESSWYYARYTSPGARDAVDKRGNYWLPVDQYIGGIEHAILHLMYFRFY 562

Query: 277 ------AFLLSANLPL---------------------------PKKV---------FSHG 294
                 A ++ +N P                            P  V          +  
Sbjct: 563 HKLLRDARMVDSNEPARNLLCQGMVIAETYYRPNPDGSKDWINPADVEVQRDERGRITGA 622

Query: 295 FILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            ++  G+        K+SKS  N +DP  ++++ G D +R F +      +   +++ G+
Sbjct: 623 TLIADGQPVVVGGTEKMSKSKNNGVDPQAMVDKYGADTVRLFSMFAAPPEQSLEWNEAGV 682

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRE 403
                    +G+   + R  + + K               D   +++       + ++ +
Sbjct: 683 ---------DGMARFLRRLWAQVQKHAADGAAPALDVAALDANQKALRRKTHETIGKVGD 733

Query: 404 NMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +   +   + A+A V+ L++ + ++          +   ++   V     E ++ + +LL
Sbjct: 734 DYGRRHSFNTAIAAVMELMNALAKF----------EDGSEQGRAVRQ---EALQAIVLLL 780

Query: 463 QAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
               P  ++ ++ +L   +   E++ F   D  
Sbjct: 781 NPITPHASHALWQVLGHGETLLEDQPFPQADAG 813


>gi|194382482|dbj|BAG64411.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 30/284 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +     + I++A+ Y N  PH+G+    ++ ADV AR+ RL   + L+  GTDE+G    
Sbjct: 133 VAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATE 192

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +   D+      D+    +IS+D F RTT  +     + +++++  +G +
Sbjct: 193 TKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFV 252

Query: 120 YKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEEEGYFFR 168
            +             +  D  V            +G          N V+  + +    R
Sbjct: 253 LQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCEVCR 312

Query: 169 ------LSAYQDKLLSYYESHPEFI---------LPIERRNEVISFVKSGLKDLSLSRKT 213
                  S +    L   E   E                +    S+++ GLK   ++R  
Sbjct: 313 SCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRD- 371

Query: 214 FDWGIKIPDD--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             WG  +P +     + YVW DA   YL+ T    +      K 
Sbjct: 372 LKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKN 415


>gi|238693262|sp|B4RX92|SYL_ALTMD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 867

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 32  EKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N    ++    L   Y  D  + T +  ++   +  + ++ +KG +Y
Sbjct: 92  INNNTAPAKWTYSNIDYMKNQLRSLGFGYDWDREVTTCKSDYYRWEQWFFTRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL   
Sbjct: 152 KKNSTVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYAEELLQDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E   E+   +            G
Sbjct: 208 EQLEEWPDQVRAMQANWIGRSEG 230



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 80/191 (41%), Gaps = 26/191 (13%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP EVI+  G D +R F +      +   +   G++         G    
Sbjct: 626 KMSKSKNNGIDPQEVIDLYGADTVRLFTMFAAPPEQTLEWVDSGVE---------GANRF 676

Query: 362 VSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
           + R   ++ +  +   P      + ++  +++     + ++++ +++  +   + A+A V
Sbjct: 677 LRRIWKLVTEHVEKGTPEAIDVKSLSKDQQALRREVHKTIEKVSDDLGRRQTFNTAVAAV 736

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++             L+K   + A  +  +  E    + +LL    P +A++++ +L
Sbjct: 737 MELLNH------------LQKAPQESAQDI-AIMREACESILLLLNPITPHIAHELWKVL 783

Query: 478 FVADENRCFQS 488
             +++      
Sbjct: 784 GHSEDIDSAPW 794


>gi|168234605|ref|ZP_02659663.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735911|ref|YP_002117396.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194711413|gb|ACF90634.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197291693|gb|EDY31043.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 951

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|104783415|ref|YP_609913.1| valyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|95112402|emb|CAK17129.1| valyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 948

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 66/420 (15%), Positives = 130/420 (30%), Gaps = 93/420 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDEAGQVYVGRDEAEVRAKHKLGNEVVLRQDDDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   ++      A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQR 492
            N   +RA       V V+     L   F+P +  +I+  +     +  +    Q   + 
Sbjct: 722 ENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGIEGKTIMLQPWPEA 781



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 68  T--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AKGQNRHDLGRDKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|297581350|ref|ZP_06943273.1| valyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297534188|gb|EFH73026.1| valyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 953

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQDNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|229521568|ref|ZP_04410986.1| valyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229341162|gb|EEO06166.1| valyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 953

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELKVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|110834808|ref|YP_693667.1| leucine-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647919|emb|CAL17395.1| leucine-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 822

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 38  SKEKFYCLSMFPYPSGRLHMGHVRNYSIGDVVSRYQRMLGKNVLQPMGWDAFGLPAENAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R     L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 98  IKNKVAPAKWTFENIDYMRGQLQRLGFGYDWGRELATCTPEYYRWEQWFFTKLYEKGLVY 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   +F +++ Y D+LL+  
Sbjct: 158 RKMSTVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYADELLNDL 213

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 214 DQLDGWPEQVKTMQRNWIGRSEG 236



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 110/277 (39%), Gaps = 38/277 (13%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y              D +   +W P D ++ G +    H +Y   F        
Sbjct: 499 FMESSWYYARYCSPQSDTAMLDPAATNYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDTG 558

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P  K++   G +L  G K+SKS GN +DP ++IEE G D +R F++      + 
Sbjct: 559 LVNCDEPF-KQLLCQGMVLKDGAKMSKSKGNTVDPQQMIEEYGADTVRLFMMFAAPPEQS 617

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             ++  G++       A      + R V+  ++  +       A  ++ +++       +
Sbjct: 618 LEWNDAGVEG------AFRFIKRLWRLVAEHVEAGNTGTLDVNALDDAGKALRRKTHETI 671

Query: 399 QEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
           Q++ ++   +   + A+A V+ L++EV + FDA     L  K     A+ +L        
Sbjct: 672 QKVSDDYGRRNTFNTAIAAVMELINEVSK-FDAATDNALAVKQEALEAAVLLLA------ 724

Query: 457 QLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
                    +P   + ++  L   +   +  + S+D+
Sbjct: 725 -------PIIPHAGHSLWQALGHDEAVIDASWPSVDE 754


>gi|187925353|ref|YP_001896995.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187716547|gb|ACD17771.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 944

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 111 TDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 170

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 171 AMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 230

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 231 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLND 286

Query: 180 YESHPEFILPIERRNEVI 197
            E           +   I
Sbjct: 287 LEGLGWPERVKIMQQNWI 304



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++         G   
Sbjct: 703 EKMSKSKNNGVDPQLLIDQHGADTARLFVMFAAPPEQSLEWSGSGVE---------GASR 753

Query: 361 LVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    +   +           ++ ++++      VL++   + Q    +  ++ 
Sbjct: 754 FLRRVWSFSQANEAALRQGGTFDAAQLSDVEKTLRREIYSVLKQADFDYQRLQYNTVVSA 813

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  E    L  +L   VP L  +++  
Sbjct: 814 AMKMLNALD----------------SAKGARPAVLRETHSVLLRVLYPVVPHLTFQLWQE 857

Query: 477 LFVADE 482
           L  ADE
Sbjct: 858 LGYADE 863


>gi|284928619|ref|YP_003421141.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809078|gb|ADB94783.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 868

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E++K Y  +   YP+   H+GH    +I DV+ARF RL G  VL   G D  G     A
Sbjct: 40  SEKQKFYALSMFPYPSGNLHMGHVRNYVITDVIARFKRLQGYSVLHPMGWDAFGLPAENA 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G++ + +  +N    R     L   I ++  I T    ++   + L+ +    G  
Sbjct: 100 AIDRGISPEEWTKKNIAKMRQQLQSLGLSIDWEREITTCSPSYYKWTQWLFLQFYKVGLA 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    +G  + +    V+      +F +++ Y + LL+ 
Sbjct: 160 YQKEATVNWDPVDQTVLANEQV--DTEGYSWRSGAK-VEKKLLCQWFLKITDYAEYLLND 216

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
             +   +   ++   +       G
Sbjct: 217 LNTLKGWPDSVKLMQKNWIGKSLG 240



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 119/321 (37%), Gaps = 70/321 (21%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY 274
           K+       M  +ID+   YL         +  +  KAK+W P D +V G +    H +Y
Sbjct: 501 KLAKRETDTMDTFIDSSWYYLRYTDSKNSQEIFNPDKAKYWAPVDQYVGGVEHAILHLLY 560

Query: 275 ---------------------------WPAFLLSANLPLPKKVFSHGFILHKG------- 300
                                          +   NL   K +        K        
Sbjct: 561 SRFLTKFLKNQKLIDINEPFKNLLTQGMVQGITYKNLKTGKYIPCDQVNSAKPTDPVTGD 620

Query: 301 ------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS  N +DP EV+E+ G D  R F++ +    KD  +    ++ +     
Sbjct: 621 DLEAFYEKMSKSKYNGVDPQEVLEKYGADTARMFILFKAPPEKDLEWSSSDVEGQFR--- 677

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRA 413
                N V R V + +++ +    +    T++++ +      +++E+ ++++ N   + A
Sbjct: 678 ---FLNRVWRLVHLYIQNKNNKTQSKT-LTKNEKDLKRSIHTIIKEVSQDLEENYQFNTA 733

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+++ L + ++ + D                    V  E I  L  LL  F P ++ ++
Sbjct: 734 IAELMKLSNVLNDFKDIN----------------SSVYQEGIVALLTLLSPFAPHISEEL 777

Query: 474 FDILFVADEN--RCFQSLDQR 492
           +  L   +    + + S+D +
Sbjct: 778 WHSLGYKESIHLQKWPSVDNQ 798


>gi|91790434|ref|YP_551386.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123355109|sp|Q122Q4|SYL_POLSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91699659|gb|ABE46488.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 886

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 88/236 (37%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y  + + YP+ + H+GH     I D+L R+ R+ G +VL   G D  G     A
Sbjct: 34  KPRGKYYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMKGYNVLMPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 94  AMKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKMLEKGIA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ +++ Y ++LL +
Sbjct: 154 YRKTQVVNWDPVDQTVLANEQVIDGKG----WRTGATVEKREIPGYYLKITDYAEELLGH 209

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            +          R   E       G++           G  I     Y+     D 
Sbjct: 210 VQHQLPGWPERVRLMQENWIGKSEGVRFAFTHDIRDASGALIGGGKMYVFTTRADT 265



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 107/350 (30%), Gaps = 32/350 (9%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++        ++  + +         +     G++ 
Sbjct: 492 GVVCPVCGKPARRETDTMDTFVDSSWYYMRYCDPKNDQQMVAGGADYWMPMDQYIGGIEH 551

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +  G K     FWP+++  
Sbjct: 552 AILHLLYARFWTKVMRDLGLVKIDEPFTKLLTQGMVLNHIYSRKGDKGGIEYFWPSEV-- 609

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVG 321
             +DI         A   S  L           + ++G   +SKS  N +DP ++IE  G
Sbjct: 610 --EDIHDAAGKVTGAKRKSDGL----------LVNYEGVGTMSKSKNNGVDPQDLIERYG 657

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R + +          ++ D   +     L       V  S +              
Sbjct: 658 ADTARLYTMFTAPPEATLEWN-DAAVEGSYRFLRRVWNFGVKLSAAKTAAAAAQAAGFVA 716

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
            + +  + +      VL++I  + Q    +  ++  + L++ ++ +           TN 
Sbjct: 717 EYGKEAKELRREIHTVLKQIDYDYQRMQYNTVVSGNMKLLNALENF-----------TND 765

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             A +      E    L   L    P LA+ ++  L  A +         
Sbjct: 766 GAAGS-HKALHESFGILLRCLYPATPHLAHALWSELGYAAQQGDLLDAPW 814


>gi|315186805|gb|EFU20563.1| Isoleucyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 1048

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 128/394 (32%), Gaps = 14/394 (3%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +++ IS      +       +  ++ Y+    +  G  G       N   W      ++ 
Sbjct: 407 IYRAISSWFVAVEKIKERMIANNEKIYWMPSHIKHGRFG---KWLENARDWAISRNRYWG 463

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIPDDPQYI 227
                 +  +   +         +    +            ++      G  +   P+ +
Sbjct: 464 NPLPIWRCEACGHTECIGSRQELKEKSGVWPEDLHKHFVDKITYPCPSCGGTMRRIPE-V 522

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           +  W ++         Y         + +PAD    G D     F+ +   +  L    P
Sbjct: 523 LDCWFESGAMPYAQNHYPFENKEKFERHFPADFVCEGIDQTRGWFYTLLVLSTALFDEPP 582

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKD 344
               + +   +   G+K+SKS  N  DP +VIE  G DALR FL+       ++  Y  +
Sbjct: 583 FLNNITTGLVLAADGKKMSKSERNYTDPKDVIETFGADALRLFLMHSAVVRAEELRYSDE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G+++ +   L               +       P        D  ILS   R++  + E 
Sbjct: 643 GVREVLKNVLIPLWNAYAFFVTYANIDGIRPTAPPEDPAHPLDRWILSEAQRLVLTVTEE 702

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILLQ 463
           M    + RA+  +++ +  ++ ++  +      K+  D            V+  L  +  
Sbjct: 703 MDRYDLVRAIDPIVAFIDSLNNWYIRRSRRRFWKSESDADKREAYATLWTVLMTLVKVAA 762

Query: 464 AFVPKLANKIFDILFVADENRC-----FQSLDQR 492
             VP +  +I+  L   +         +  +D+R
Sbjct: 763 PIVPFITEEIYRNLRTEEMPESVHLCDWPEVDER 796



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     + D+  R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPGTVKDIFPRYKTMRGYKVERRFGWDCHGLPVEYEMEKELGISGKR 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +  + +R +   +   + +D+  +T +  + +T   + K++
Sbjct: 107 QIEEYGVARFNEACRSIVLRYVKEWRQIVTRMGRWVDFDNDYKTMDPDYMETIWWVMKQL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG +Y+G Y   Y  R     ++ E+  G
Sbjct: 167 WEKGLLYEGYYILPYCPRCSTVLSNHELNLG 197


>gi|255659377|ref|ZP_05404786.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848463|gb|EEX68470.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 826

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y      YP+   H+GH     I DV+AR+  ++G +VL   G D  G     AA
Sbjct: 30  DRPKYYALEMFPYPSGNLHMGHVRNYAIGDVMARYKTMEGFNVLHPMGFDSFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N  N       L +SY  D  ++T +  ++   + L++    +G  Y
Sbjct: 90  IKHGVKPADWTYSNIENMEKQQKKLGLSYDWDREVKTCDPSYYKWTQWLFELFYKRGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +         +++V  G          + V   +   +F +++ Y D LL   
Sbjct: 150 KKKASVNWCDTCGTVLANEQVIDGK----CWRCDHEVHKKDLSQWFLKITDYADVLLKDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++   +       GL
Sbjct: 206 DKLKGWPERVKTMQDNWIGRSEGL 229



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 127/401 (31%), Gaps = 43/401 (10%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLS 170
            G   K    G     ++  +    V             Y     PV      G      
Sbjct: 392 TGMDIKAAMKGIMDKAEKEGFGKRRVNFRLRDWLISRQRYWGAPIPVINCPHCGEVLVPE 451

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                +L    S  +  L     +E     K        +R+T         D       
Sbjct: 452 KDLPVMLPEDVSFDQGSLSPLASSESFVHCKCPKCGADATRET---------DTMDTFIC 502

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLS 281
                  Y       +     K  +W P D ++ G +    H +Y          A L+ 
Sbjct: 503 SSWYYLRYTDPHNDKEPFAKDKVNYWAPVDQYIGGIEHAILHLLYSRFFTKVLHDAGLVD 562

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    + + G +L  G K+SKS GNV+ P E+I + G D  R F++      +D  +
Sbjct: 563 FDEPFT-NLLTQGMVLKDGSKMSKSKGNVVSPEEIIAKYGADTARLFILFAAPVDRDLEW 621

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
              G++        N +  ++      I              T+ ++ +  +    ++++
Sbjct: 622 SDQGVEGSYR--FLNRVWRILGHFEEAIKS--GKADYDTSKLTKEEKDLRRILHVTIRKV 677

Query: 402 RENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            E++    + + A++ ++ LV+ +  +            + D  +    +  EV   L  
Sbjct: 678 TEDVRDRFMFNTAVSSIMELVNALYAF-----------QDKDLKA---GLAREVAENLIK 723

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           LL  F P +  +++  LF    +   Q      +    L +
Sbjct: 724 LLAPFAPHITEELWSRLFAGQGSVHQQKWPTYDEAATKLAE 764


>gi|127511856|ref|YP_001093053.1| valyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|126637151|gb|ABO22794.1| valyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 959

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 135/399 (33%), Gaps = 62/399 (15%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y     + K A     N     V    E  YF  +   QD  +S        I    
Sbjct: 380 DQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDIQDWCISRQLWWGHRI--PA 437

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
             +E         +    ++   D  + +  DP  ++  W  +     +T G+ D+ +  
Sbjct: 438 WYDEAGKVYVGRDEAEVRAKHNLDDSVVLRQDPD-VLDTWFSSALWTFSTLGWPDDTEAL 496

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKI 303
           K    P D+ V G DI+ F         +           +P      +      +G K+
Sbjct: 497 KTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDEQGNKM 555

Query: 304 SKSLGNVIDPIEVIEEV-------------------------------------GVDALR 326
           SKS GNV+DP+++I+ +                                     G DALR
Sbjct: 556 SKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHGTDALR 615

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----- 381
           + L    + G+D  +D   L         N I N  SR V M  ++ D    +P      
Sbjct: 616 FTLAAMASTGRDINWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEEQDCGPQSPNGKADG 672

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D  I+ + ++ ++   E+M+N     A   +         D Y +  KP    
Sbjct: 673 EMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQFCDWYLELTKPVLQN 732

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            T  ++  T  +  V V+  +  LL   +P L   I+  
Sbjct: 733 GTEAEQRGT-RHTLVTVLEAMQRLLHPMMPYLTETIWQR 770



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 21/169 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKVE 95

Query: 68  TT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
                                + +Q+          L   + +D    T ++      + 
Sbjct: 96  AEEGKSRHDLGRETFIDRIWDWKNQSGGTITKQLRRLGASVDWDRERFTMDEGMSAAVQE 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ ++ +   IY+G     +  +     +D EV              P+
Sbjct: 156 VFVRLYNDDLIYRGKRLVNWDPKLHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|323144739|ref|ZP_08079316.1| valine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415490|gb|EFY06247.1| valine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 956

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 76/401 (18%), Positives = 138/401 (34%), Gaps = 88/401 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R S      L   E      +P +  N   S+++  L+D  +SR+   
Sbjct: 375 PIEPMLTDQWYVRASVLGKPALEAVEDGRIKFVPAQYTNMYYSWMRD-LQDWCISRQ-LW 432

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D +  +YV                            W  +     +T G+ 
Sbjct: 433 WGHRIPAWYDEKGNIYVARSEEEVRSKYNLDQNIVLTQDPDVLDTWFSSALWTFSTLGWP 492

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           DN    +    P  + V G DI+ F         +           +P      +     
Sbjct: 493 DNTKELETFH-PTSVLVTGFDIIFFWVARMIMMTMHFMKNPDGTPQVPFHTVYVTGLIRD 551

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DP+++I+ +                                     
Sbjct: 552 EEGQKMSKSKGNVLDPLDMIDGIDIDSLVKKRTANMMQPQIAEKIAKRTRKQFPDGISAH 611

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N I N  SR V M +     + P  
Sbjct: 612 GTDALRFTLCALASNGRDINWDMKRLEG--YRNFCNKIWN-ASRFVLMNIDGMSLVKPQA 668

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I S  +  +++IRE +      +    +   +     D Y +  K   + K
Sbjct: 669 SDLSLADRFIYSKLATAIKDIREALDAYRFDQVATILYEFIWNEYCDWYLEFTK--AILK 726

Query: 439 TNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +   A+      Y  V+V+  +  +    +P +   I+  
Sbjct: 727 DDALSAAQHNATAYTLVDVLETVLRMAHPVIPFITETIWQQ 767



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 25/164 (15%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           A+  PN     H+GHA++  I D L RFHR++G + L+  GTD  G       +      
Sbjct: 40  ALPPPNVTGSLHMGHAFQQTIMDSLIRFHRMNGDNTLWQCGTDHAGIATQMVVERKLAKE 99

Query: 70  KVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +                           +R  R + D +D S + F  T ++   +  + 
Sbjct: 100 ENLTRHDLGREKFIERIWKWRQESGGTITRQMRRLGDSVDWSRERF--TMDEGLSNAVKE 157

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           ++ ++ D+  IY+G     +  +     +D EV       Y   
Sbjct: 158 VFVRLYDEDLIYRGKRLVNWDPKLRTAISDLEVENKEVKGYMWY 201


>gi|117621368|ref|YP_858156.1| valyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562775|gb|ABK39723.1| valyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 971

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 135/398 (33%), Gaps = 85/398 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R++      +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 394 PIEPMLTDQWYVRVAPMAKTAIEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCVSRQ-LW 451

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 452 WGHRIPAWYDDAGNVYVGRNEDEVRAKHSIPSVTTLRQDEDVLDTWFSSALWTFSTLGWP 511

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +N +  K    P D+ + G DI+ F         +           +P      +     
Sbjct: 512 NNTEALKTFH-PTDVLMSGFDIIFFWIARMIMMTMHFIKDENGQPQVPFKTVYITGLIRD 570

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DP+++I+ +                                     
Sbjct: 571 EEGQKMSKSKGNVLDPLDMIDGISLEDLLEKRTGNMMQPQMAEKIGKRTAKQFPEGIEAH 630

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPT 379
           G DALR+ L    + G+D  +D   L    N    N + N  SR V M  +D D      
Sbjct: 631 GTDALRFTLAALASTGRDINWDMKRLDGYNN--FCNKLWN-ASRYVLMNTEDQDCGFNGG 687

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
              F+ +D  I S     +++ R  +       A   +   +     D Y +  KP  L 
Sbjct: 688 EMQFSLADRWIQSQLQVAIRDFRTALDTYRFDIAAGVLYEFIWNQFCDWYLELTKP-VLT 746

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           K +        +  V V+  L  L    +P +   I+ 
Sbjct: 747 KGSEAEQRAARHTLVSVLETLLRLAHPIIPFITETIWK 784



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  + D L R++R+ G + L+  GTD  G      
Sbjct: 51  TSKDSFCIMIPPPNVTGSLHMGHAFQQTLMDTLIRYNRMQGKNTLWQAGTDHAGIATQMV 110

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + D +D   + F  T ++
Sbjct: 111 VERKIAAEEGKTRHDYGREAFIDKIWQWKEESGGTITRQMRRLGDSVDWERERF--TMDE 168

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 + ++ ++ + G +Y+G     +  +     +D EV       +      P+
Sbjct: 169 GLSAAVQEVFVRLYEDGLMYRGKRLVNWDPKLNTAISDLEVENREIKGHMWHLRYPL 225


>gi|331000453|ref|ZP_08324128.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329571785|gb|EGG53465.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 877

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y+   + YP+ + H+GH     + DVL R+ R+ G++V+   G D  G     A
Sbjct: 36  KEKPKFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRGMNVMTPMGWDSFGLPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  + +   + L +++D    + T +  ++   + ++ K+ +KG  
Sbjct: 96  AIAKKVAPAKWTYDNIADMKAQMEPLGLAFDWSREVTTCKPDYYRWNQWMFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V +G            V+  E  GY+  ++ Y ++LL  
Sbjct: 156 YRKTQTVNWDPVDHTVLANEQVIEG----RGWRSGAIVEKREIPGYYLGITQYAEELLKD 211

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   + R  E       G
Sbjct: 212 LDQLQGWPEQVRRMQEHWIGKSYG 235



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 120/356 (33%), Gaps = 36/356 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    +DEA+ N      G D +      +   +++   Y+ R  +   +     E + 
Sbjct: 474 SGNPLNQDEAFLNCKCPKCGGDAKRETDTMD--TFVDSSWYYMRYCSPDCETSMVDERND 531

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D G+   D+P   ++              Y
Sbjct: 532 YWMAMDQYIGGIEHAVLHLLYARFWTKVMRDLGLVKFDEPFKRLFTQGML----TAECFY 587

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            + PDG K  F+P++L ++                    LP+              EK+S
Sbjct: 588 RELPDGRKRWFYPSELGIV----YDAKGRIEKITAKEDGLPVKSGGI---------EKMS 634

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  NV++P  +I + G D  R F++      +   +   G +          + N    
Sbjct: 635 KSKNNVVEPSAIIGKFGADTARAFVMFAGPPDQSAAWSNSGAEGTFR--FMRRLWNFGFT 692

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              +I ++   +          ++++       L++   ++     +  ++  + +++ +
Sbjct: 693 HQDVIKEN---VKLDVAKLNHEEKAVRRDIYTALKQAEFDLDRMQYNTVVSAAMKMLNSL 749

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           D          LK    +    V+    E +  L   L    P +  ++F+ L   
Sbjct: 750 D---------TLKDNTSEGTRAVIN---EGMSILLRTLYPIAPHITAQLFEDLGYD 793


>gi|288928354|ref|ZP_06422201.1| valine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331188|gb|EFC69772.1| valine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 893

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 130/395 (32%), Gaps = 58/395 (14%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    H P++      +F ++  + D  L           P + +N 
Sbjct: 330 LMEKTEDYNNKVGYSERTHVPIEPKLSTQWFLKMQHFADLALQPVMDDDIAFYPQKYKNT 389

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 390 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFTANGKRECVVALTAEEALAKAKAVCGTLTA 447

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYW 275
              +  +  +  W  +    ++    ++ PD  +   ++P    V G DI+ F    +  
Sbjct: 448 ADLEQDEDCLDTWFSSWLWPISVFNGINQPDNEEINYYYPTSDLVTGPDIIFFWVARMIM 507

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     +P     F+       G K+SKSLGN  DPIE+IE+ G D +R  ++     
Sbjct: 508 AGYEYRGKMPFKNVYFTGIVRDKLGRKMSKSLGNSPDPIELIEQYGADGVRMGMMLSAPA 567

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+   ++  N        N +  +  ++        P P A   + +   +   
Sbjct: 568 GNDILFDETLCEQGRN------FNNKIWNAFRLVKGWEVSDQPQPEASRIACQWFEAKLR 621

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV- 454
           +  +E+ +      I  AL  V  L      ++D    W L+   P   S +   T    
Sbjct: 622 QTNEELNDLFSKYRISEALMAVYRL------FWDEFSSWYLEMIKPAYGSPIDSHTYNAT 675

Query: 455 ---IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                 L  +L  F+P +  +++  +    E    
Sbjct: 676 LRYFETLLNMLHPFMPFITEELWQHIAERKEGESI 710



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GRAPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  ++          L  S  +D    T +    +
Sbjct: 92  VAKLAEKGVKKTDLSRDEFLKHAWDWTHEHGGIILKQLRRLGASCDWDRTAFTMDDERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVLKVFCDLYEKGLIYRGVRMVNWDPQAQTALSDEEVVYKEEH 194


>gi|255325490|ref|ZP_05366592.1| valine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297428|gb|EET76743.1| valine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 906

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 126/406 (31%), Gaps = 29/406 (7%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
            IR   +      + +   +   G   +        L  + + +  +    A G      
Sbjct: 338 EIREALREQGRIVKEIRPYVHSVGHSERSGEPIEPRLSLQWFVDVAK-MAKASGDAVREG 396

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              +     E  +F             +      +PI    E     +  +       + 
Sbjct: 397 DTTLHPQSLEPRYFEWVDDMHDWCISRQLWWGHRIPIWYGPEGEDGQRDIVCVGPD--EE 454

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
              G +   D   ++  W  +     +T G+ +       KF+P ++ V   DIL F   
Sbjct: 455 PPAGYEQDPD---VLDTWFSSALWPFSTLGWPEKTS-DLEKFYPTNVLVTAYDILFFWVA 510

Query: 274 YWPAFLLSAN----------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
               F   A                 +P             +G K+SKSLGN IDP++ +
Sbjct: 511 RMMMFGTFAGTHTPELLGEGTDGRPQVPFKDLYLHGLVRDEQGRKMSKSLGNGIDPMDWV 570

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G DALR+ L R    G D     D      N   A  + N    ++  +       +
Sbjct: 571 RDYGADALRFTLARGANPGVDLPLGSDAAAAARN--FATKLFNATKFAL--MNGAGAATL 626

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
           P     +++D  IL     V  ++   + +    +A   +     +   D Y +  K   
Sbjct: 627 PNRAELSDADRWILDRAEEVRAKVDAYLDDYQFAKANELLYHFTWDELCDWYLEIAKTQI 686

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +    ++      V   V+  +  LL   +P +   ++  L   +
Sbjct: 687 PRDGVSEQGRNTQIVLGRVLDVVLRLLHPTMPFVTEVLWKALTGGE 732



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 47  SEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTK 106

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +     T          + F+D+                R + D +D S + F  T + 
Sbjct: 107 VEAKLKETEGKKRWDYEREEFIDKVWEWKEQYGGTIQNQMRAIGDSVDWSRERF--TLDD 164

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D+G IY+      +S   E   +D EV  
Sbjct: 165 GLSRAVQTIFKNLYDEGMIYQANRLVNWSPVLETAVSDIEVVY 207


>gi|325278213|ref|ZP_08143706.1| valyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324096653|gb|EGB95006.1| valyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 948

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 126/401 (31%), Gaps = 89/401 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDEAGQVYVGRNEQEVRAKHQLGADVVLRQDDDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   ++      A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +RA       V V+     L   F+P +  +I+  +
Sbjct: 722 ENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRI 762



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AKGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|306820218|ref|ZP_07453861.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551764|gb|EFM39712.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 1036

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 139/390 (35%), Gaps = 65/390 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +      P+ +  +  Y+  ++ +++KL+    ++     P     +        L
Sbjct: 384 HNYPHCWRCQTPLIYYAKPSYYIEVTKFKEKLIEN--NNSVNWFPQFIGEKRFGNWLENL 441

Query: 205 KDLSLSRKTFDWGIKI-------------------------------------------- 220
            D ++SR    WG  +                                            
Sbjct: 442 NDWAISRSR-YWGTPLNIWVCDECGHKESIGSRAELAQKAIEDIDENIELHRPYVDDVTI 500

Query: 221 --------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                       + ++  W D+ +       Y         + +PAD    G D     F
Sbjct: 501 KCPHCAKTMHRVKDVIDCWFDSGSMPYAQLHYPFENKEVFKQNFPADFICEGIDQTRGWF 560

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   A  +    P    + +   +   G+K+SKS GN +DP E+ E+ G DALR++L+
Sbjct: 561 YSLIAIATYVDGVSPYKNVLVNDLILDKNGKKMSKSKGNTVDPFELFEQYGADALRWYLL 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDE 388
                     +D DGLK+  +   +          +     D D           +E D 
Sbjct: 621 YVSPAWSPTKFDIDGLKEVQSKFFSTIKNIYNFFVLYANTDDIDIKSIDVPYEQRSELDR 680

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYF--DAQKPWELKKTNPDRA 444
            +LS  + ++  + + +    + +A+ ++   V+EV  + Y     ++ W  + T   + 
Sbjct: 681 WLLSKYNNLVDYVVKQLDVYDMTKAVREIQEFVNEVFSNWYIRRSRRRFWGTEMTLDKK- 739

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +V   T EV++ +  L+  F P L+++++
Sbjct: 740 -SVYLTTFEVLKGITQLVAPFAPFLSDEMY 768



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++EK          N +P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 36  QDKEKFIFYEGPPTANGKPGIHHVIARTLKDSVCRYKTMRGYQVKRKAGWDTHGLPVEIE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +    +R M   +   I  D+   T +  +
Sbjct: 96  VEKKLSLSSKQEIEQYGIEKFNKECRDSVFEYESLWRKMTQRMGYLIDLDNPYITLDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   +  K+     IY+G     Y  R        EV +G  
Sbjct: 156 IETEWWILDKMFKDNLIYEGHKILPYCPRCGTGLASHEVSQGYK 199


>gi|255307553|ref|ZP_05351724.1| leucyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 806

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  TEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  
Sbjct: 90  AIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V +GA           V   + E ++F+ + + ++LL+ 
Sbjct: 150 YKKKSYVNWCPSCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +      +G
Sbjct: 206 LDTLDGWPEKVKTMQKNWIGKSTG 229



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 133/414 (32%), Gaps = 45/414 (10%)

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
           +    RD A+  ++   D I    + +       +  +                 R +  
Sbjct: 344 HDERDRDFAEKYNLDIIDVI---TEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRT 400

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
            N          Q Y     PV + +E G           LL                ++
Sbjct: 401 INYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSK 460

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                          R+          D              Y+ +    +         
Sbjct: 461 QFMSTTCPHCGKPARRE---------VDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNR 511

Query: 256 W-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS
Sbjct: 512 WHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKS 570

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN + P+++I+E G D  R F++      +D  + + G+         N +  LV    
Sbjct: 571 KGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELA 628

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
            ++ KD +      G     D+ +       L+++  ++ +    + A++ ++ L++++ 
Sbjct: 629 DVVKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMY 683

Query: 426 RYFDAQKPWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +Y                   +   V  E ++ +  ++  F P L  +++ ++ 
Sbjct: 684 KY--------------KELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIG 723


>gi|126700138|ref|YP_001089035.1| leucyl-tRNA synthetase [Clostridium difficile 630]
 gi|255093504|ref|ZP_05322982.1| leucyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315246|ref|ZP_05356829.1| leucyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255517915|ref|ZP_05385591.1| leucyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651031|ref|ZP_05397933.1| leucyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|255656504|ref|ZP_05401913.1| leucyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|260684098|ref|YP_003215383.1| leucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687757|ref|YP_003218891.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296450048|ref|ZP_06891810.1| leucyl-tRNA synthetase [Clostridium difficile NAP08]
 gi|296878429|ref|ZP_06902435.1| leucyl-tRNA synthetase [Clostridium difficile NAP07]
 gi|306520893|ref|ZP_07407240.1| leucyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123173953|sp|Q182K8|SYL_CLOD6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115251575|emb|CAJ69408.1| Leucyl-tRNA synthetase [Clostridium difficile]
 gi|260210261|emb|CBA64530.1| leucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213774|emb|CBE05712.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296261056|gb|EFH07889.1| leucyl-tRNA synthetase [Clostridium difficile NAP08]
 gi|296430513|gb|EFH16354.1| leucyl-tRNA synthetase [Clostridium difficile NAP07]
          Length = 806

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  TEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  
Sbjct: 90  AIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V +GA           V   + E ++F+ + + ++LL+ 
Sbjct: 150 YKKKSYVNWCPSCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +      +G
Sbjct: 206 LDTLDGWPEKVKTMQKNWIGKSTG 229



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 133/414 (32%), Gaps = 45/414 (10%)

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
           +    RD A+  ++   D I    + +       +  +                 R +  
Sbjct: 344 HDERDRDFAEKYNLDIIDVI---TEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRT 400

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
            N          Q Y     PV + +E G           LL                ++
Sbjct: 401 INYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSK 460

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                          R+          D              Y+ +    +         
Sbjct: 461 QFMSTTCPHCGKPARRE---------VDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNR 511

Query: 256 W-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS
Sbjct: 512 WHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKS 570

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN + P+++I+E G D  R F++      +D  + + G+         N +  LV    
Sbjct: 571 KGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELA 628

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
            ++ KD +      G     D+ +       L+++  ++ +    + A++ ++ L++++ 
Sbjct: 629 DVVKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMY 683

Query: 426 RYFDAQKPWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +Y                   +   V  E ++ +  ++  F P L  +++ ++ 
Sbjct: 684 KY--------------KELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIG 723


>gi|313902198|ref|ZP_07835606.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467533|gb|EFR63039.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 868

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y      YP+ + H+GH     I D  ARF+R+ G +VL+  G D  G     AA
Sbjct: 35  SRPKYYCLEMYPYPSGKLHMGHVRNYSIGDATARFYRMRGFNVLYPMGWDSFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R+    L +SYD    I  +   ++   + L+  +  +G + 
Sbjct: 95  IANQTHPARWTYANIAAMREQMQRLGLSYDWRREIACSHPGYYKWTQWLFLLLYKRGLVE 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  R      +++V  G           PV+  E E +FF+++AY D+LL+  
Sbjct: 155 RKKAPVNWCPRCATVLANEQVEDGT----CWRCGTPVEKRELEQWFFKITAYADRLLADL 210

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 211 DLLEGWPERVKVMQRNWIGRSEGM 234



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 111/298 (37%), Gaps = 56/298 (18%)

Query: 228 MYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF----L 279
           M  ++D+   Y             D  K  +W P D ++ G +    H +Y         
Sbjct: 500 MDTFVDSSWYYYRYTSPRDEHQPFDREKVFYWLPVDQYIGGIEHAVLHLLYSRFITKVLY 559

Query: 280 LSANLPLPK---KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
               +P P+   ++ + G ++  G K+SKS GNV+ P +++EE G DA R F++      
Sbjct: 560 DEGLVPSPEPFQRLLTQGMVIKDGAKMSKSKGNVVSPEDILEEYGADATRLFILFAAPPE 619

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-------------------- 376
           +D  + + G++    +   + +  LV+     I      +                    
Sbjct: 620 RDLEWSEHGIEGA--SRFVHRVWRLVAGCAGAIRGATGQVAAARDGAVAVPRPEVPQPPA 677

Query: 377 ------------IPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSE 423
                       +P    +   + ++     R +  +  +M +    + A+A ++ LV+ 
Sbjct: 678 GGRQAAAADAGVMPVTEGWGPEEHALWREVHRAIARVTADMAERMQYNTAVAALMELVNA 737

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  Y D  +P          A+    +    + +L  +L  F P LA + +++L   +
Sbjct: 738 IYGYRDRVEP----------AAQRADLLAAALDRLLRMLAPFTPYLAEEAWELLGWRE 785


>gi|301095003|ref|XP_002896604.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108922|gb|EEY66974.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 885

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  Y  +   YP+ Q HIGH     I+D +ARF R+ G DVL   G D  G     AA
Sbjct: 45  KKKPYYCLSMFPYPSGQLHIGHVRVYTISDCMARFKRMQGYDVLHPMGWDAFGLPAENAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G++   + + N    +     L I +D    + T    ++   + ++ ++ +KG  Y
Sbjct: 105 IERGISPADWTEANIAQAKKQLKALGIRFDWEREVTTCAPDYYKWTQWIFLQMFNKGLAY 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V               V+      +F R++ Y ++LL   
Sbjct: 165 RKEALVNWDPVDKTVLANEQVDAE---GRSWRSGAIVEQRSLNQWFLRITEYGNRLLDDL 221

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
               ++   ++R          G
Sbjct: 222 NKLNKWPDAVKRMQTSWIGRSEG 244



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 40/193 (20%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   ++ + EK+SKS  N +DP ++    G D  R  ++ +     +  +D+  L     
Sbjct: 639 TGLPVVTQWEKMSKSKYNGVDPEQIRARHGADVTRLAVLFKAPPTHELEWDEADL----- 693

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-I 410
                G    ++R  ++                E +  +       ++ + E + +    
Sbjct: 694 ----AGQSRWLARIWTL--------------LDEDENELRHELHGTIKRVTEALNDFHSF 735

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKL 469
           + A+A+++ L + +                  R         E  +  L  +L    P  
Sbjct: 736 NVAIAELMKLSNLL---------------GERRTQLQDSAAYEEALSALVQMLAPLAPHT 780

Query: 470 ANKIFDILFVADE 482
           A ++F  L    E
Sbjct: 781 AAEMFQALHDGGE 793


>gi|171849151|pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate In The
           Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3-
           Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The
           Editing Site
          Length = 878

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 5/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  GRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N R  ++   ++ I   +D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   
Sbjct: 151 RAKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDL 207

Query: 181 ESHPEFILPIERRNEVISFVK 201
           E           +   I   +
Sbjct: 208 EGLNWPEKVKAMQRAWIGRSE 228



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 29/210 (13%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKS GN +     ++E G D  R  ++       +  + ++G++         
Sbjct: 632 LWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQ--------- 682

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R    + +D + ++ T G F        D  +       L+++ E+++    +
Sbjct: 683 GAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFN 742

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++  ++ +  Y         +K  P     V  V    IR    +L  F P LA 
Sbjct: 743 TAIAALMEFLNALYEY---------RKDRP-----VTPVYRTAIRYYLQMLFPFAPHLAE 788

Query: 472 KIFDILFVAD-ENRCFQSLDQRLKPGFMLH 500
           +++   +        +  LD++     ++ 
Sbjct: 789 ELWHWFWPDSLFEAGWPELDEKALEKDVVE 818


>gi|116624918|ref|YP_827074.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122252610|sp|Q01U81|SYL_SOLUE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116228080|gb|ABJ86789.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 810

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 6/200 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+   HIGH     I D LAR+  + G +VL   G D  G     A
Sbjct: 31  SAKPKFYVLEMLPYPSGTLHIGHIRNYSIGDALARYKWMRGFNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V  + +  QN    +        SY  D  + T E  ++   +  + ++ ++G  
Sbjct: 91  AIANKVPPRQWTLQNIAAMKKTHRRFAFSYDWDREVSTCEPEYYRWNQWFFLRMLERGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  +      +++V    DG  +  +  PV+    + +F +++ Y D+LL  
Sbjct: 151 YRKRALVNWCPKCATVLANEQV---VDGCCWRHEGTPVEQRALDQWFLKITDYADQLLDE 207

Query: 180 YESHPEFILPIERRNEVISF 199
             +  E   P        ++
Sbjct: 208 -MARLEGGWPERVLTMQRNW 226



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 121/320 (37%), Gaps = 46/320 (14%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA---- 258
           G   L    +  +       +P       +D   +         +P  S+  F PA    
Sbjct: 464 GRSPLENVPEFVNVACPKCGEPARRETDTMDTFVDSSWYFYRYCDPHNSERPFDPAKIAY 523

Query: 259 ----DLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               D ++ G +    H IY            L +N    +++F+ G ++ +G K+SKS 
Sbjct: 524 WFEIDQYIGGIEHAILHLIYSRFFTKVMRDIGLISNNEPARRLFTQGMVIAEGAKMSKSK 583

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+    + ++ G D  R F++  +   K+  + ++G         A G    + R   
Sbjct: 584 GNVVGADLLADKFGADTARMFVLSNVPPEKEVDWREEG---------AEGTYRFLGRVYR 634

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDR 426
              ++     P      ++D  ++    + L++I E+ + +   +  +A ++ LV+    
Sbjct: 635 FTTRNV----PAQQRSGDADRKVVRKLHQTLKKITEDFETRWHFNTCIASIMELVNL--- 687

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                    L     + ++ V+    +++  LA++L  F P L+ ++++ +    E   F
Sbjct: 688 ---------LYAEEQNISAAVMP---QILESLALMLAPFAPYLSQEMWEEIG--KEGPVF 733

Query: 487 QSLDQRLKPGFMLHKTFDPI 506
           +       P     +  + +
Sbjct: 734 RQAWPAFDPELAKEEGAEIV 753


>gi|322370215|ref|ZP_08044777.1| valyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550551|gb|EFW92203.1| valyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 872

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 81/475 (17%), Positives = 169/475 (35%), Gaps = 37/475 (7%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN-------FRDMADVLDISYDDF 94
           G ++      D  G+    A        K  VD  +R+       F +   + +++ +  
Sbjct: 243 GQEIELVGDDDVDGEFGTGAVMICTFGDKQDVDWWARHDLDLRPVFTEDGRLNELADEFE 302

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY--YNDDEVYKGADGQYYNA 152
             T ++   +    L ++             G     D      + ++ +   +      
Sbjct: 303 GLTIDEAKTEVAETLDEEGYLNDSETTEQSVGTCWRCDTPIEILSKEQWFVEVEPDKIVE 362

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL----PIERRNEVISFVKSGLKDLS 208
           +   V+W+  E  + RL  + D +   +    + +     P     E   +  + +++L 
Sbjct: 363 KAKEVKWI-PEHMYTRLEEWADGMSWDWVISRQRVFATPIPAWECEECGHWHIADIEELP 421

Query: 209 LSR--------KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +             + G         +M  W+D+    L  +G+ ++ +  + +  P  L
Sbjct: 422 VDPTETGPAVGDCPECGGDSWVGETDVMDTWMDSSITPLHISGWPEDIELDEFE--PVAL 479

Query: 261 HVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DI+R  A Y       L+   P  + + +       G K+SKS GNV+ P + ++
Sbjct: 480 RPQGHDIIRTWAFYTLLRVGELTGERPWDEILINGMVFGPDGNKMSKSRGNVVTPTDAVD 539

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E G D++R  LV     G D  +     +    +     I N++          +D   P
Sbjct: 540 EYGADSVRQALVLGGQPGSDVQFQPK--EATSASRFLTKIWNILQ----FSENHFDENTP 593

Query: 379 TPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
                A+ ++D  ILS  S   + + ++M+     RAL  +   V E   D Y +  K  
Sbjct: 594 EISDPAYRDADRWILSRLSHTAESVSDDMKRYRYDRALRTLREFVWEDLADDYLELVK-G 652

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            L +  P   +   +     +  +  +L  F P  + +++  L   +E+    + 
Sbjct: 653 RLYEGRPGERNAARHALYTCVSSVVRMLSPFSPFFSEEVYSYLPGTEESVNLATW 707



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I T   YP  + HIGH  +    D  AR+HRL G +VLF  G D HG       +   
Sbjct: 35  YVIDTPPPYPTGRLHIGHGLQWSYIDFAARYHRLRGEEVLFPQGWDCHGLPTEVKVEENH 94

Query: 67  VTTK-------------VFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWK 111
              +                ++   + ++  + L  S D     RT +  +    +  + 
Sbjct: 95  GIHRTEVSREEFRRLCIEHTEEQIDSMKETMNELGFSIDWNAEFRTMDPEYWGKTQRSFV 154

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ +   +Y+  +   +  R E    D EV
Sbjct: 155 EMEES--VYRDEHPVNWCPRCETAIADAEV 182


>gi|309791520|ref|ZP_07686022.1| isoleucyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226445|gb|EFO80171.1| isoleucyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 1088

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 65/428 (15%), Positives = 138/428 (32%), Gaps = 62/428 (14%)

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
               + ++   G  +K           E               +     +P+ +  +  +
Sbjct: 383 VMPEFAELGFAGKFFKQADPDITRNLRERGLLLKSGRVRHYYPFCWRCDSPLLFYAKRSW 442

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----- 220
           + + +A++  L++   +     +P   R+           D ++SR+   WG  +     
Sbjct: 443 YIKTTAFKPDLVAN--NQQIHWVPEHIRDGRFGNWLENNIDWAISRER-YWGTPLPIWVS 499

Query: 221 -------------------------------------PDDPQY--------IMYVWIDAL 235
                                                 + P +        +   W D+ 
Sbjct: 500 ADGNHMECIGSLEELEQKVGRSLQDLDLHRPYVDDLTWEHPDHGTMRRIPDVADCWYDSG 559

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSH 293
           +  +    Y            PAD      D     F+ ++  + LL         +   
Sbjct: 560 SMPVAQWHYPFENQEVFEAAHPADYICEAVDQTRGWFYTLHAVSTLLFDRPAFNNVICLG 619

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +  +G K+SKS GNVI P EVI + GVDALR++L      G    +    L       
Sbjct: 620 HILDEQGLKMSKSRGNVITPQEVITQYGVDALRWYLFTAAPPGNPRRFS-GALVNESLRK 678

Query: 354 LANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               + N  S  V    L  +   +         D   L+  + +++++  +++   ++ 
Sbjct: 679 FMLTLWNTYSFFVTYANLDGWQPGMTESVELQPIDRWALARLNGLVRDVTASLEEYEVYP 738

Query: 413 ALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           A   +   V E+ + Y   + ++ W+  +T+ D+           +  ++ L+  F P +
Sbjct: 739 AGRAIEHFVDELSNWYVRRNRRRFWK-SETDGDK-QAAYQTLYTALLTVSKLMSPFAPFM 796

Query: 470 ANKIFDIL 477
           A  I+  L
Sbjct: 797 AEAIYRNL 804



 Score = 54.4 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 19/159 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-VLFTTGTDEHGQKIAKAAQ 63
           +           N +P + H    I  DV+ R+  + G   V    G D HG  +    +
Sbjct: 58  KPFVFYEGPPTANGRPGLHHVISRIFKDVICRYRAMQGYKIVGRREGWDTHGLPVEIEVE 117

Query: 64  N----------AGVTTKVFVDQNSRNFRDMADVLD-----ISY---DDFIRTTEKRHHDT 105
                             F  +   +  +           I+Y   DD   T + ++ ++
Sbjct: 118 KKLGFNGKPDIEKYGIAEFNARCRESVWEYIQEWQTFTKRIAYWVSDDGYYTYDNKYIES 177

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
              +++++ D+G +++      +  R     +D EV  G
Sbjct: 178 LWWIFRQLWDRGLLFRDYKVTMHCPRCGTGLSDHEVSLG 216


>gi|146324353|ref|XP_747587.2| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129556234|gb|EAL85549.2| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 988

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 77  DRPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 136

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 137 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYRKGLAY 196

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   ++G  + +    V+ ++ + +FFR++ +++ LL   
Sbjct: 197 QAEALVNYDPVDKTVLANEQV--DSNGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDL 253



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 31/197 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP     + G DA R  ++      +   +D   +   +R    L
Sbjct: 687 NISFEKMSKSKHNGVDPTSCALQYGADATRAHVLFSAPVSEVLEWDDTKIVGIERWFGRL 746

Query: 355 ANGI----GNLVSRSVSMILKDYDGMIPTPGAFT-------ESDESILSVCSRVLQEIRE 403
              +     +L S S ++   D                   +SD   L    + +  +  
Sbjct: 747 WKLVLDAKQSLASASFTVSQNDLQKSPYATSKLPSLLQGLGDSDAEGLLHTHQTIVSVTN 806

Query: 404 NMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++N    ++  ++ +  L +             L  +NP    T   V    +  L  L
Sbjct: 807 CIENNPYGLNTVISDLTKLTN------------TLTSSNP----TSPQVLYLCVSSLVRL 850

Query: 462 LQAFVPKLANKIFDILF 478
           L    P LA++ +++L 
Sbjct: 851 LAPVAPALASECWEVLN 867


>gi|11498241|ref|NP_069467.1| isoleucyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122898|sp|O29622|SYI_ARCFU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2649988|gb|AAB90608.1| isoleucyl-tRNA synthetase (ileS) [Archaeoglobus fulgidus DSM 4304]
          Length = 1018

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 88/480 (18%), Positives = 159/480 (33%), Gaps = 38/480 (7%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            GL+V      D+ G    +A + AG   K     N     D+     +         E+
Sbjct: 335 KGLEVFNP--VDDRGVYTEEAGKYAGKHVKEA---NDDIIDDLYRKDLLL-------AEE 382

Query: 101 RHHDTCRILWKKISDKGDI-YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           R        W+  +       +  +     L+DE     D+V    +        + V  
Sbjct: 383 RIVHRYGHCWRCKTPIIYRATEQWFIKISELKDEMLEEIDKVMWIPEWAGSARFKDWVSN 442

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + +    R   +   +  +       +  +   NE+       L    +   TF     
Sbjct: 443 AK-DWCISRQRYWGIPIPVWICEKCGEMKVVGSINEIEWENDLDLHRPKIDAVTFSCQCG 501

Query: 220 -IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            +      +  VW D+      +  Y    D    + WPAD    G D     F++    
Sbjct: 502 GVMRRVPDVFDVWFDSGVASWGSIAYPLRKD-KFEELWPADFITEGHDQTRGWFYSQLGT 560

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + +     P    +     +  +G K+SKSLGNV++P EV+ ++GVD  R +++   A  
Sbjct: 561 SVVCFDKAPYKAVLMHGFTLDEQGRKMSKSLGNVVEPEEVVGQIGVDGFRLYVLYS-APW 619

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D  +  +  + R    + N + N V  +   M L +Y       G     D  ILS   
Sbjct: 620 EDLRFSWE--EARNINRMLNVVWNAVRFAHTYMSLDNY--SFGEKGELKIEDRWILSRLE 675

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++E  E M+   +HR +              Y    +P   ++ +        Y    
Sbjct: 676 SFIKEANEAMEGYQVHRVVRAFFDFFVEDFSRWYIQIIRPRVWEERDSPSKLAAYYTMFR 735

Query: 454 VIRQLAILLQAFVPKLANKIFDIL---FVADENRCF---------QSLDQRLKPGFMLHK 501
           VI +    +  F P +A   +  +   F   E   F         + +D  L+    + K
Sbjct: 736 VIDRSLRAIAPFAPLIAEWFYQHVVKEFREGEESIFMEEYSTAEVEMIDGELEAAMKVAK 795



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K Y      Y   + H+G A+  ++ D + R+ R+ G     T G D HG  I   
Sbjct: 31  KGGRKFYFVDGPPYTTGRIHLGTAWNKVLKDTILRYKRMMGFAPTDTPGWDMHGLPIEVK 90

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                         +   N     +    L +   +++   T +  +
Sbjct: 91  VEQELGFRTKRDIESFGIDKFIERCMNYALANKDAMTEQFKSLAVWMDWENPYMTIKAEY 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +      K+  ++G + +      +  R E    D EV    +         PV
Sbjct: 151 MNAAWFAIKRAHERGLLERKKMVVNWCHRCETALADAEVEYWDEEDPSIYVKFPV 205


>gi|319942764|ref|ZP_08017068.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319803644|gb|EFW00594.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 879

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ + + YP+ + H+GH     + DV+ RFHR+ G +V+   G D  G     AA 
Sbjct: 38  KPKFYVCSMLPYPSGKLHMGHVRNYTLNDVMYRFHRMKGYNVMTPMGWDAFGLPAENAAL 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  + +   + L +++D    + T +  ++   + L+ K+ +KG  Y+
Sbjct: 98  AKKVQPAAWTYSNIADMKAQMEPLGLAFDWSREVATCKPEYYRWNQWLFLKMLEKGIAYR 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V +G            V+  E  GY+  ++ Y  +LL   +
Sbjct: 158 KTQIVNWDPVDKTVLANEQVIEG----RGWRSGAIVEKREIPGYYLGITQYAQELLDDIK 213

Query: 182 SHPEFILPIERRNEVISFVKSG 203
           +   +   + R  E       G
Sbjct: 214 TLDGWPEQVRRMQEHWIGRSEG 235



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 116/354 (32%), Gaps = 35/354 (9%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + +A+ N      GAD +      +   +++   YF R  +         +   
Sbjct: 475 SGNPLTKCDAWKNVKCPKCGADAERETDTMD--TFVDSSWYFQRYCSPDCTTAMVDKRAD 532

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D+G+   ++P   ++         +    Y
Sbjct: 533 YWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKYNEPFKNLFTQGML----MAECYY 588

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            D PDG +  ++P ++ V   D  R       A       P+         +L   EK+S
Sbjct: 589 RDMPDGHRRWYYPDEVEVQFDDKARP----VGAISKEDGEPV---------VLGGIEKMS 635

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  NV++P ++I + G D  R F++      +   +   G +          I N    
Sbjct: 636 KSKCNVVEPRDIINKFGADTARSFVMFAGPPDQSAAWSNSGAEGTFR--FLRRIWNWAY- 692

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +    L +      + G   E+   +       L++   +      +  ++  + + + +
Sbjct: 693 AHQTDLNNAAEASTSEGFSHEA-RHLRREIHSCLKQADYDYSRMQYNTVVSACMKMFNAI 751

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           D +         K T  +          E    L   L    P +   ++  L 
Sbjct: 752 DGF---------KGTESEGGKAA---LKEAASILLRTLYPIAPHITTALWKELG 793


>gi|118602477|ref|YP_903692.1| valyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567416|gb|ABL02221.1| valyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 915

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 137/392 (34%), Gaps = 80/392 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       +   ++     +P    N+        ++D  +SR+   W
Sbjct: 351 IEPYLTNQWFVKIKPLAQPAIDAVKNGDIRFIPENW-NKTYFNWMDNIQDWCISRQ-IWW 408

Query: 217 G--IKIPDDPQY--------------------------IMYVWIDALTNYLTTTGYLDNP 248
           G  I    D +                           ++  W  +     +T G+    
Sbjct: 409 GHRIPAWYDDKGNIFVADSLEQAQKQAGEGVILIQDEDVLDTWFSSALWPFSTLGWPKKT 468

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
               ++F+P D+ V G DI+ F    +       +  +P      +      +G+K+SK 
Sbjct: 469 S-DLSRFYPTDVLVTGFDIIFFWVARMIMFGLKFTGKIPFKDIYITGLIKDGQGQKMSKF 527

Query: 307 LGNVIDPIEVIEE-------------------------------------VGVDALRYFL 329
            GNV+DPI++I+                                       G DALR+  
Sbjct: 528 NGNVLDPIDLIDGITLRDLLKKRTQGLMQPKMVEKTKKQTKKEFSDGIPAFGTDALRFTF 587

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
               + G+D  ++   ++     +  N + N  SR V M L+     I      + +D+ 
Sbjct: 588 AALASFGRDIKFNLKRVEG--YRNFCNKLWN-ASRFVLMKLE--GETIDINAQLSTADKW 642

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS        + +++ +  +      +   V     + Y +  KP  L + +  +A T 
Sbjct: 643 ILSRLQNTKANVEKHLNDYRLDLMSQTLYEFVWHDYCNWYLELSKP--LLQDDTTKAGT- 699

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
               ++V+R++  LL   +P +  +IF+   +
Sbjct: 700 RATLIKVLREIVTLLHPIIPFITEEIFEQCNI 731



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA++  I D+L R+HR++G   L+  G D  G      
Sbjct: 31  TSKNAYCIMLPPPNVTGSLHMGHAFQHTIMDILTRYHRVNGDQTLWQPGIDHAGIATQMV 90

Query: 62  AQNA--------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    K++  +       +   R +   +D   + F  T +  
Sbjct: 91  VERQLTMQDMTRHEVGRDKFIDKIWDWKAKYGGTITSQMRRLGSSVDWKKERF--TMDDD 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ ++ ++G IY+G     +        +D EV    +         PV
Sbjct: 149 LSNAVKKVFIQLFEEGLIYRGKRLVNWDPILHTAISDLEVISTEEQGSLWHMRYPV 204


>gi|119944944|ref|YP_942624.1| leucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166231632|sp|A1SU60|SYL_PSYIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119863548|gb|ABM03025.1| leucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 859

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 89/233 (38%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++R+ R+ G +V+   G D  G     AA
Sbjct: 31  SKEKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +     L   YD    + T +  ++   +  + K+ +K  +Y
Sbjct: 91  IKNNTAPAGWTYENIAYMKTQLKQLGFGYDWSRELATCQPEYYRWEQWFFTKLVEKDLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++AY  +LL   
Sbjct: 151 KKMATVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITAYAQELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
           +   E+   +            G      +S   ++F      PD    + YV
Sbjct: 207 DKLDEWPEQVRTMQRNWIGRSEGVEMDFKVSGKEESFSVYTTRPDTVMGVTYV 259



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 115/320 (35%), Gaps = 80/320 (25%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y              D  KA +W P D ++ G +    H +Y   F        
Sbjct: 492 FMESSWYYARYCSPQSDDAMLDPEKANYWLPVDQYIGGIEHAILHLLYSRFFHKLLRDFG 551

Query: 280 -LSANLPLPK-------------------------------------KVFS-----HGFI 296
            +  + P  K                                     KV S        +
Sbjct: 552 LVDCDEPYKKLLTQGMVLADAYYYEDAKGGKVWIAPTDVETETDEKGKVISAATKDGQTV 611

Query: 297 LHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           ++ G  K+SKS  N +DP  +I++ G D++R F++      +   +    L+  +     
Sbjct: 612 IYDGMSKMSKSKNNGVDPQVMIDKYGADSVRLFMMFAAPADQTLEWSDSALEGSLR--FL 669

Query: 356 NGIGNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
             +  +    +++  + D D         TE+ +++     + + ++ +++  +   + A
Sbjct: 670 KRLWKIAFDHLALGAVADLDLKSH-----TEAQKTLRRELHKTIAKVTDDIGRRQTFNTA 724

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A V+ L++++ +           KT  DRA     +  E +  +  LL    P +  ++
Sbjct: 725 IASVMELMNKLTK--------TATKTEQDRA-----ILQEALLAITKLLAPITPHICAEL 771

Query: 474 FDILFVADE--NRCFQSLDQ 491
           F++L   +E  N  + ++D+
Sbjct: 772 FEVLGQTEEILNAPWPTVDE 791


>gi|310642970|ref|YP_003947728.1| isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
 gi|309247920|gb|ADO57487.1| Isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
          Length = 1029

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 81/455 (17%), Positives = 157/455 (34%), Gaps = 26/455 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +       V F    D  G  +A+    AG   K       +    M     + Y     
Sbjct: 324 YRVCRENGVGFINVVDLQGNYVAEITDFAGRFVKDCDVDIVK----MLSEKGLLY----- 374

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS--LRDEAYYNDDEVYKGA----DGQYY 150
              K  ++       +       Y        +  ++D+   N+ EV        +G++ 
Sbjct: 375 --SKEKYEHSYPFCWRCDTPLLYYAMDSWFIKTTAIKDQLIANNSEVEWYPGHVREGRFG 432

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLS---YYESHPEFILPIERRNEVISFVKSGLKDL 207
                 V W      ++               +  H    L      +V + ++     +
Sbjct: 433 KFLEELVDWNISRDRYWGTPLNIWVCEETGEQFAPHSIAELRERAIGDVPADIEIHKPYV 492

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              +     G         ++ VW D+ +       Y    + +  + +PAD+   G D 
Sbjct: 493 DDIKVRSQCGKYEMTRTPEVIDVWFDSGSMPFAQHHYPFENNETFEQQFPADMICEGIDQ 552

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+++   + +L+   P    + +   +  +G+K+SKS GNVIDP EVI+E G DA 
Sbjct: 553 TRGWFYSLLAVSTMLTGKAPYKAVMATGHVLDEQGQKMSKSKGNVIDPWEVIDEYGTDAF 612

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR-SVSMILKDYDGM-IPTPGAF 383
           R+ L+ + A      + K G+     + L + + N  +  ++   +  +D    P   + 
Sbjct: 613 RWALLSDSAPWNSKRFSK-GIVGEAKSKLVDTLVNTHAFLTLYADIDGFDPARYPFKPSA 671

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPD 442
            + D  ILS  + ++  + + +       +   + S V E+ + Y    +         +
Sbjct: 672 HKLDRWILSRLNSLILVVDKALSVNDFLNSSKAIESFVDELSNWYIRRSRDRFWGNGLTE 731

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                     EV+   A LL  F P LA  I+  L
Sbjct: 732 DKLDAYRTLTEVLLTTAKLLAPFTPLLAEDIYLNL 766



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N +PHIGH    +I D + R+  + G  V+   G D HG  +   
Sbjct: 35  EGKPNFVFYEGPPTANGKPHIGHVLGRVIKDFVGRYQTMKGYRVVRKAGWDTHGLPVELG 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            Q                       K  V +  + +RD+ + +      D    T +  +
Sbjct: 95  VQKQLGISHKPEIEEYGVEKFIKKCKASVFEYEQQWRDLTEAIGYWTDLDHPYITLDNNY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +   I +K  +Y+G     Y    +   +  EV +G  
Sbjct: 155 IESVWNILATIHEKDLLYRGHRVSPYCPDCQTTLSSHEVAQGYK 198


>gi|302540507|ref|ZP_07292849.1| putative methionyl-tRNA synthetase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458125|gb|EFL21218.1| putative methionyl-tRNA synthetase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 526

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 101/531 (19%), Positives = 192/531 (36%), Gaps = 39/531 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            L+I+      + + HIGH A   + ADVL+R  R DG  VLF+TGT +H + +   A  
Sbjct: 4   PLWITATPPATHGELHIGHLAGPYVAADVLSRHLRADGRPVLFSTGTADHTESVELRALR 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR-HHDTCRILWKKISDKGDIYKGC 123
           AG   +   +              + +D  ++    R +    + L+  +  +  I    
Sbjct: 64  AGRKPEEVAEGYRVAITADWLRSGVEFDHIVQPRRDRGYQRWVQNLFLDLYGQDVIVART 123

Query: 124 YSGWYSLRDEAYYNDDEVYKGA-------DGQYYNAQHNPVQW------------MEEEG 164
               +    E + +   V           DG   +    P                 E  
Sbjct: 124 RLHPFCPSCERWLHGAFVMGACSACGARADGSLCHECARPTDADLIDPVCALCGSPGERH 183

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF-VKSGLKDLSLSRKTFDWGIKIPDD 223
              RL    + L      H        R   +    ++ GL ++++     DWG+ +P D
Sbjct: 184 RCRRLYLPLEPLRESLADHWASTESSPRLAALWESLLEDGLPEVAVGHPG-DWGVPVPVD 242

Query: 224 P--QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
               + +    +A+  +L   GY   P   +A      +H         HA+  PA L++
Sbjct: 243 DFRHHRIDACFEAVVMHLFGYGYDHKPLPERA------VHFCEFGHAFCHAVLLPAILIA 296

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             + LP++++ +       E+     G   +  ++++ E G D LR  ++ E   G+   
Sbjct: 297 RGVKLPQEIYVNETYRVDAERAHGFGGEAGVWALDLLTEFGSDTLRRHVLEERPHGRRTE 356

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           + +D L +R    L     N ++R  + + +D  G++P         E++     R  ++
Sbjct: 357 FRRDRL-ERTRQVLETTWNNWLTRLFTTVREDCAGVVPDAEPGGTGWEALRRRLYRAAED 415

Query: 401 IRENM--QNQLIHRALAQVISLVS-EVD-RYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +RE    +     RA+A +  +VS   D  Y +  +  + +     R    +   + V  
Sbjct: 416 LREAYGPEAFDPRRAVAVLDEVVSCAADFGYVNVFE--QRRPRRGGRRLPTITAQLSVAV 473

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
            L       +P+ A ++   L +               PG  L     P+F
Sbjct: 474 ALTSWAWPVMPEGAGRLAAALRMKPGGPVVPEALAPPAPGVRLDPPSGPVF 524


>gi|269214495|ref|ZP_05986692.2| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209638|gb|EEZ76093.1| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 967

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 122 SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 181

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 182 MKHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 241

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 242 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 297

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 298 DKLEHWPEQVKTMQRNWIGKSRGMTVR 324



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 18/194 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++          +  
Sbjct: 724 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAHR--FLRRLWR 781

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            V   +    K       +    ++  + +       + ++ ++  + Q  + A+A V+ 
Sbjct: 782 TVYEYLKQ-GKAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAAVME 840

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L   +++Y D         T  ++  TV     EV+     LL   VP +   ++  L  
Sbjct: 841 L---LNQY-DKT------DTGGEQGRTV---AQEVLETAVRLLWPIVPHICETLWSELNG 887

Query: 480 AD-ENRCFQSLDQR 492
           A      + ++D+ 
Sbjct: 888 AKLWEAGWPTVDEA 901


>gi|313676555|ref|YP_004054551.1| isoleucyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943253|gb|ADR22443.1| Isoleucyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 1120

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 109/281 (38%), Gaps = 11/281 (3%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G K+  +P  ++ VW D+         Y    + +  K +PAD    G D     F  ++
Sbjct: 579 GQKMFREPD-LIDVWFDSGAMPYAQWHYPFENNETFDKNYPADFIAEGVDQTRGWFFTLH 637

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + +L  ++     + +   +  +G K+SK LGN I+P E I++ G DA R++++    
Sbjct: 638 AISGMLFDSVAYKNVIANGLVLDKEGNKMSKRLGNAINPFETIKKYGPDATRWYMIANAN 697

Query: 335 CGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +  ++  G+++             N  +   ++    ++G        TESD  ILS
Sbjct: 698 PWDNLKFNLQGVEEVQRKFFGTLQNTYNFFALYANLDGFTFEGESIPLEKRTESDRWILS 757

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVL 448
             + + + +     +    RA   +   V     + Y   + ++ W+      +      
Sbjct: 758 KLNSLKKAVDVAYDDYEPTRAARLIQDFVQDDVSNWYVRLNRKRFWK--GEYNEDKKAAY 815

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               E +  +AIL     P   + +F  L        F+S+
Sbjct: 816 QSLYECLESIAILSAPIAPFYMDNLFQSLNNISNRMDFESV 856



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P I H     + D+  R+  L G  V    G D HG  +   
Sbjct: 37  EGKPTFTFYEGPPSANGTPGIHHVMARAVKDIFCRYKTLKGFQVKRKGGWDTHGLPVELQ 96

Query: 62  AQNAGVTTKV------FVDQNSRNFRDMADVLDISYDDFIR-------------TTEKRH 102
            +     TK        V + +   +         +DD  R             T ++++
Sbjct: 97  VEKELGITKEDIGKKITVAEYNDRCKKAVMKFKGEWDDLTRKMGYWVDLDDPYITFDRKY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   L KK  DK  +YKG     YS       +  E+ +   
Sbjct: 157 METLWHLLKKFHDKNLLYKGYTVQPYSPAAGTGLSSHELNQPGC 200


>gi|255101684|ref|ZP_05330661.1| leucyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 806

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  TEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  
Sbjct: 90  AIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V +GA           V   + E ++F+ + + ++LL+ 
Sbjct: 150 YKKKSYVNWCPSCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +      +G
Sbjct: 206 LDTLDGWPEKVKTMQKNWIGKSTG 229



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 133/414 (32%), Gaps = 45/414 (10%)

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
           +    RD A+  ++   D I    + +       +  +                 R +  
Sbjct: 344 HDERDRDFAEKYNLDIIDVI---TEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRT 400

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
            N          Q Y     PV + +E G           LL                ++
Sbjct: 401 INYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSK 460

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                          R+          D              Y+ +    +         
Sbjct: 461 QFMSTTCPHCGKPARRE---------VDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNR 511

Query: 256 W-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS
Sbjct: 512 WHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKS 570

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN + P+++I+E G D  R F++      +D  + + G+         N +  LV    
Sbjct: 571 KGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELA 628

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
            ++ KD +      G     D+ +       L+++  ++ +    + A++ ++ L++++ 
Sbjct: 629 DVVKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMY 683

Query: 426 RYFDAQKPWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +Y                   +   V  E ++ +  ++  F P L  +++ ++ 
Sbjct: 684 KY--------------KELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIG 723


>gi|119467784|ref|XP_001257698.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119405850|gb|EAW15801.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 958

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 47  NRPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 107 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYQKGLAY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++ +++ LL   
Sbjct: 167 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDL 223



 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 31/197 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP     + G DA R  ++      +   +D   +   +R    L
Sbjct: 657 NISFEKMSKSKHNGVDPTSCALQYGADATRAHVLFSAPVSEVLEWDDTKIVGIERWFGRL 716

Query: 355 ANGIGN------LVSRSVSM--ILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRE 403
              + +      L S +VS   + K        P       +SD   L    + +  +  
Sbjct: 717 WKLVLDAKQSLALASFTVSQNDLQKSSGATSKLPSLLQGLGDSDADGLLHTHQTIVSVTN 776

Query: 404 NMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++N    ++  ++ +  L +             L  +NP    T   V    +  L  L
Sbjct: 777 CIENNPYGLNTVISDLTKLTN------------TLTSSNP----TSPQVLYLCVSSLVRL 820

Query: 462 LQAFVPKLANKIFDILF 478
           L    P LA++ +++L 
Sbjct: 821 LAPVAPALASECWEVLN 837


>gi|330975722|gb|EGH75788.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 948

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVPTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 ETVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|330874244|gb|EGH08393.1| valyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 838

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 302 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 359

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 360 WWGHSIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 419

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 420 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 478

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 479 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVDKRTSGLMQPHLAKKIEKQTRQEFADGIAS 538

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 539 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 593

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 594 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 653

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 654 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 695


>gi|46200127|ref|YP_005794.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|31615792|pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Pre-Transfer Editing Substrate Analogue In Both
           Synthetic Active Site And Editing Site
 gi|313507210|pdb|2BTE|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507211|pdb|2BTE|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507217|pdb|2BYT|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|313507218|pdb|2BYT|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|46197755|gb|AAS82167.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 878

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 5/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  GRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N R  ++   ++ I   +D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   
Sbjct: 151 RAKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDL 207

Query: 181 ESHPEFILPIERRNEVISFVK 201
           E           +   I   +
Sbjct: 208 EGLNWPEKVKAMQRAWIGRSE 228



 Score = 96.8 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 29/210 (13%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKS GN +     ++E G D  R  ++       +  + ++G++         
Sbjct: 632 LWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQ--------- 682

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R    + +D + ++ T G F        D  +       L+++ E+++    +
Sbjct: 683 GAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFN 742

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++  ++ +  Y         +K  P     V  V    IR    +L  F P LA 
Sbjct: 743 TAIAALMEFLNALYEY---------RKDRP-----VTPVYRTAIRYYLQMLFPFAPHLAE 788

Query: 472 KIFDILFVAD-ENRCFQSLDQRLKPGFMLH 500
           +++   +        +  LD++     ++ 
Sbjct: 789 ELWHWFWPDSLFEAGWPELDEKALEKDVVE 818


>gi|221638390|ref|YP_002524652.1| valyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783556|sp|B9KMT9|SYV_RHOSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|221159171|gb|ACM00151.1| Valyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 987

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +    + T G+ +      A+++P ++ + G DI+ F    +   
Sbjct: 551 PVWRDPD-VLDTWFSSGLWPIGTLGWPEETP-ELARYFPTNVLITGFDIIFFWVARMMMM 608

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +   +P             KG+K+SKSLGNV+DP+E+I+E G DA+R+ L    A G
Sbjct: 609 QLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVLDPLELIDEFGADAVRFTLTAMAAMG 668

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D       ++     +    + N    + ++ + + +      P A    +  I+    
Sbjct: 669 RDLKLSTARIQG--YRNFGTKLWNACRFAEMNGVWEGHATQAAPPAATATVNRWIIGETG 726

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           RV +E+   +       A   + + V     D Y +  KP      + + A+        
Sbjct: 727 RVREEVDAALAAYRFDSAANALYAFVWGKVCDWYVEFSKPLF----DTEAAAETRATMGW 782

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ Q  +LL   +P +   ++
Sbjct: 783 VLDQCMVLLHPIMPFITEDLW 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 53/157 (33%), Gaps = 21/157 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVER 95

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHD 104
                                   + +Q+     +    L  S D + R   T +     
Sbjct: 96  ELARAGNPGRREMGREAFLEKVWEWKEQSGGTIVNQLKRLGASCD-WSRNAFTMDPNFQR 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               ++  + +KG IY+G     +    E   +D EV
Sbjct: 155 AVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEV 191


>gi|78776936|ref|YP_393251.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497476|gb|ABB44016.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 875

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 78/388 (20%), Positives = 135/388 (34%), Gaps = 61/388 (15%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           +E +    E +K   G  Y    N V+    + +F R S    K +    +      P  
Sbjct: 328 EEGFVVKIEEHKHQVGHCYR-CKNIVEPYISKQWFVR-SEVARKSIEKTNNGEAKFFPPH 385

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   +     L+D  +SR+   WG +IP                              
Sbjct: 386 WIN-SYNSWMGDLRDWCISRQ-LWWGHQIPVFYCGDCDNEWASLKDEEHTCPKCASKNIS 443

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH-- 271
            DP  ++  W  +     +T G+ +                F+P  L + G DIL F   
Sbjct: 444 QDPD-VLDTWFSSALWPFSTLGWGNGDASMDKLFSSQDMKDFYPNSLLITGFDILFFWVA 502

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +          LP              G+K+SKS GNVIDP++++E+   D LR+ L  
Sbjct: 503 RMMMMGESFVGELPFNHIYLHALVRDEHGQKMSKSKGNVIDPLDMVEKYSADILRFTLAI 562

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDES 389
             A G+D     D L++  N +  N + N    +   +  + D      G    +     
Sbjct: 563 SAAQGRDIRMSTDKLEQ--NRNFTNKLYN----AAKFLQMNVDTFPDLKGFCVESPLGRY 616

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +LS  +   QE+R  M     + A   +   +       +    W ++ +  D+ S V  
Sbjct: 617 MLSRLNVATQEVRSCMDEYRFNDAATVLYRFLW------NEFCDWGIELSKADKGSIVE- 669

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               + ++   LL  F+P +   ++  L
Sbjct: 670 -LGAIFKESMKLLHPFMPFITEYLYHEL 696



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I         + HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 34  EEGKNFSIMMPPPNVTGRLHIGHALTFTLQDIITRYKRMDGYKTLWQPGTDHAGIATQNV 93

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +   +                    +  +++         + +S  +     T +    
Sbjct: 94  VEKQLLAEGTTKEEIGREAFLKRAWEWKAESAGIMTSQLRKMGVSPAWKRERFTMDDGLQ 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + +  +  + ++G I +G Y   +   D A  + +  ++  DG++Y+ ++
Sbjct: 154 KSVKEAFVHLYNQGLIVRGNYMVNWCTHDGALSDIEVEHEDHDGKFYHIKY 204


>gi|303257887|ref|ZP_07343896.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859230|gb|EFL82312.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 877

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y+   + YP+ + H+GH     + DVL R+ R+ G++V+   G D  G     A
Sbjct: 36  KEKPKFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRGMNVMTPMGWDSFGLPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  + +   + L +++D    + T +  ++   + ++ K+ +KG  
Sbjct: 96  AIAKKVAPAKWTYDNIADMKAQMEPLGLAFDWSREVTTCKPDYYRWNQWMFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V +G            V+  E  GY+  ++ Y ++LL  
Sbjct: 156 YRKTQTVNWDPVDHTVLANEQVIEG----RGWRSGAIVEKREIPGYYLGITQYAEELLKD 211

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   + R  E       G
Sbjct: 212 LDQLQGWPEQVRRMQEHWIGKSYG 235



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 120/356 (33%), Gaps = 36/356 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    +DEA+ N      G D +      +   +++   Y+ R  +   +     E + 
Sbjct: 474 SGNPLNQDEAFLNCKCPKCGGDAKRETDTMD--TFVDSSWYYMRYCSPDCETSMVDERND 531

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D G+   D+P   ++              Y
Sbjct: 532 YWMAMDQYIGGIEHAVLHLLYARFWTKVMRDLGLVKFDEPFKRLFTQGML----TAECFY 587

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            + PDG K  F+P++L ++                    LP+              EK+S
Sbjct: 588 RELPDGRKRWFYPSELDIV----YDAKGRIEKITAKEDGLPVKSGGI---------EKMS 634

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  NV++P  +I + G D  R F++      +   +   G +          + N    
Sbjct: 635 KSKNNVVEPSAIIGKFGADTARAFVMFAGPPDQSAAWSNSGAEGTFR--FMRRLWNFGFT 692

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              +I ++   +          ++++       L++   ++     +  ++  + +++ +
Sbjct: 693 HQDVIKEN---VKLDVAKLNHEEKAVRRDIYTALKQAEFDLDRMQYNTVVSAAMKMLNSL 749

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           D          LK    +    V+    E +  L   L    P +  ++F+ L   
Sbjct: 750 D---------TLKDNTSEGTRAVIN---EGMSILLRTLYPIAPHITAQLFEDLGYD 793


>gi|255068071|ref|ZP_05319926.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047669|gb|EET43133.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 878

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 635 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 689 RLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 748

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 749 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLETAVRLLWPIVPHICETLWSE 795

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 796 LNSAKLWEAGWPTVDEA 812


>gi|157884158|pdb|2V0G|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site.
 gi|157884159|pdb|2V0G|D Chain D, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site
          Length = 877

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 5/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  GRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N R  ++   ++ I   +D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   
Sbjct: 151 RAKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDL 207

Query: 181 ESHPEFILPIERRNEVISFVK 201
           E           +   I   +
Sbjct: 208 EGLNWPEKVKAMQRAWIGRSE 228



 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 29/210 (13%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKS GN +     ++E G D  R  ++       +  + ++G++         
Sbjct: 632 LWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQ--------- 682

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R    + +D + ++ T G F        D  +       L+++ E+++    +
Sbjct: 683 GAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFN 742

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++  ++ +  Y         +K  P     V  V    IR    +L  F P LA 
Sbjct: 743 TAIAALMEFLNALYEY---------RKDRP-----VTPVYRTAIRYYLQMLFPFAPHLAE 788

Query: 472 KIFDILFVAD-ENRCFQSLDQRLKPGFMLH 500
           +++   +        +  LD++     ++ 
Sbjct: 789 ELWHWFWPDSLFEAGWPELDEKALEKDVVE 818


>gi|152990758|ref|YP_001356480.1| valyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166225524|sp|A6Q3R4|SYV_NITSB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|151422619|dbj|BAF70123.1| valyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 871

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 89/422 (21%), Positives = 152/422 (36%), Gaps = 68/422 (16%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E +    E +K   G  Y    N V+      +F +    ++ +    E   +F  P   
Sbjct: 330 EGFIEKIEPHKHQVGHCYR-CGNVVEPYISPQWFVKAEIAKEAVKKANEGETKFYPPQWL 388

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKI------------------------------PD 222
            N   +     L+D  +SR+   WG +I                                
Sbjct: 389 NN--FNAWMRELRDWCISRQ-LWWGHRIPVWYCRACGHEWASKKEHEESCPKCGSTDIYQ 445

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--A 272
           DP  ++  W  +     +T G+ +          +    KF+P DL + G DIL F    
Sbjct: 446 DPD-VLDTWFSSALWPFSTLGWGNGDWGKGVKWFEDDLKKFYPNDLLITGFDILFFWVAR 504

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +          LP              G+K+SKS GNVIDPI+ IEE   DALR+ L   
Sbjct: 505 MMMMGEHFLHKLPFKDVYLHALVRDEHGQKMSKSRGNVIDPIDTIEEYSADALRFTLAAL 564

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G+D    K+ L+  +  +  N + N  +R + +  + +D +       T+  + ILS
Sbjct: 565 AVQGRDIRLSKERLE--LYRNFTNKLYN-AARFLQIHQEKFDDLQ-NIQIKTDLGKYILS 620

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
                +QE+R N+ +   + A   +   +     D   +      L K N D  + +   
Sbjct: 621 RFGLAIQEVRNNLNSYRFNDAATTLYRFLWGEFCDWGIE------LSKVNKDAIAELGA- 673

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA--DENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              + ++   LL  F+P +   ++  L     +EN         ++P        + I  
Sbjct: 674 ---IFKESMKLLHPFMPFITEFLYQELSGTSIEENESIM-----IQPYPKAAPIDEEIMK 725

Query: 509 RF 510
           RF
Sbjct: 726 RF 727



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 18/175 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++  +   I         + HIGHA    + D++ R+ R+DG + L+  GTD  G     
Sbjct: 34  IQNGKTFCIMMPPPNVTGRLHIGHALTFTLQDIMVRYKRMDGYETLWQPGTDHAGIATQN 93

Query: 61  AAQNAGVTT------------KVFVDQNSRN----FRDMADVLDIS--YDDFIRTTEKRH 102
             +   ++               +V +              +L +S  +     T +K  
Sbjct: 94  VVEKQLLSKGIKKEEIGREKFLEYVWKWKEESGNAIVTQLRLLGVSPAWSRERFTMDKGL 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R  +  +  +G I KG Y   +   D A  + +  Y+  +G  Y+ ++  V
Sbjct: 154 KNAVREAFVNLYYEGLIVKGNYMINWCTHDGALSDIEVEYEEKEGALYHIKYPIV 208


>gi|159122373|gb|EDP47494.1| leucyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 988

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA
Sbjct: 77  DRPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAA 136

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    ++    +  S+  D  + T     ++  + ++  +  KG  Y
Sbjct: 137 IERGIDPAEWTKQNIAKMKEQLRSISTSFDWDRELATCSPEFYEHTQRIFLMLYRKGLAY 196

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   ++G  + +    V+ ++ + +FFR++ +++ LL   
Sbjct: 197 QAEALVNYDPVDKTVLANEQV--DSNGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDL 253



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 31/197 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP     + G DA R  ++      +   +D   +   +R    L
Sbjct: 687 NISFEKMSKSKHNGVDPTSCALQYGADATRAHVLFSAPVSEVLEWDDTKIVGIERWFGRL 746

Query: 355 ANGI----GNLVSRSVSMILKDYDGMIPTPGAFT-------ESDESILSVCSRVLQEIRE 403
              +     +L S S ++   D                   +SD   L    + +  +  
Sbjct: 747 WKLVLDAKQSLASASFTVSQNDLQKSPYATSKLPSLLQGLGDSDAEGLLHTHQTIVSVTN 806

Query: 404 NMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++N    ++  ++ +  L +             L  +NP    T   V    +  L  L
Sbjct: 807 CIENNPYGLNTVISDLTKLTN------------TLTSSNP----TSPQVLYLCVSSLVRL 850

Query: 462 LQAFVPKLANKIFDILF 478
           L    P LA++ +++L 
Sbjct: 851 LAPVAPALASECWEVLN 867


>gi|197264358|ref|ZP_03164432.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198246120|ref|YP_002218339.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|197242613|gb|EDY25233.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197940636|gb|ACH77969.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326626147|gb|EGE32492.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 951

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|15889997|ref|NP_355678.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|32171574|sp|Q8UBV2|SYL_AGRT5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15157966|gb|AAK88463.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 876

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 6/209 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN    R     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  QNKVHPKDWTYQNIATMRGQLKSMGLSLDWTREFATCDVEYYHRQQALFVDFMEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR++ +   LL   +
Sbjct: 153 KQSKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFRITDFSQDLLDELD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLS 210
              ++   +    +       GL     +
Sbjct: 209 ELDQWPEKVRLMQKNWIGRSEGLSLRWQT 237



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 76/477 (15%), Positives = 152/477 (31%), Gaps = 93/477 (19%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G  +       G     F  +++  F D   +++ S+ + ++TT+       ++  + +
Sbjct: 359 YGLPVVAVVAPEGPDAASFTVEDTA-FTDDGVMINSSFLNGMKTTDAFEAVVQKLSAQSL 417

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G+  +      + LRD           G   Q Y     PV   E  G         
Sbjct: 418 ---GNAPQAERKVNFRLRD----------WGISRQRYWGCPIPVIHCEVCGVVPVPKKDL 464

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
              L    +      P++R +                      G     +    M  ++D
Sbjct: 465 PVKLPDDVTFDVPGNPLDRHST------------WRHVSCPQCGHDARRETD-TMDTFVD 511

Query: 234 ALTNYLTTTGYLDNPDGSK--AKFW-PADLHVIGKDILRFHAIY-------WPAFLLSAN 283
           +   Y   T   ++       A  W P D ++ G +    H +Y                
Sbjct: 512 SSWYYTRFTAPWEDEPTDPQVANHWLPVDQYIGGIEHAILHLLYSRFFTRAMRETGHVGV 571

Query: 284 LPLPKKVFSHGFILHKG------------------------------------------E 301
               K +F+ G ++H+                                           E
Sbjct: 572 KEPFKGLFTQGMVVHETYSRGEGLTREWVPPAELRIEENDGTRRAFLLSSGEEVKIGSIE 631

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP ++I   G D  R+F++ +    +D  + + G++       AN     
Sbjct: 632 KMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPDRDVIWSEAGVEG------ANRFVQR 685

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R +    +   G+ P P    E   +  +   + L+ ++E++     ++A+A++  LV
Sbjct: 686 VWRIIGEAAEQLKGVKPKPATEGEGLAASKA-AHKTLKAVQEDLDKLAFNKAIARIYELV 744

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + +                PD    V     + +  L  ++    P LA + +  L 
Sbjct: 745 NALAGPLADVA----AGGKPD---NVKAAARDAVEILIRIIAPMTPHLAEECWSALG 794


>gi|204926949|ref|ZP_03218151.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323614|gb|EDZ08809.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 951

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGNDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|322615639|gb|EFY12559.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618699|gb|EFY15588.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322621888|gb|EFY18738.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627613|gb|EFY24404.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322630919|gb|EFY27683.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637862|gb|EFY34563.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642320|gb|EFY38926.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322643905|gb|EFY40453.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322651019|gb|EFY47404.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322656728|gb|EFY53016.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659848|gb|EFY56091.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322661941|gb|EFY58157.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666311|gb|EFY62489.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672730|gb|EFY68841.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676160|gb|EFY72231.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680644|gb|EFY76682.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684462|gb|EFY80466.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323194201|gb|EFZ79398.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197346|gb|EFZ82486.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201536|gb|EFZ86600.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206050|gb|EFZ91012.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213061|gb|EFZ97863.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215432|gb|EGA00176.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219416|gb|EGA03901.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227720|gb|EGA11874.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323228890|gb|EGA13019.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236498|gb|EGA20574.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240001|gb|EGA24048.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241952|gb|EGA25981.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247899|gb|EGA31836.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251463|gb|EGA35334.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323258171|gb|EGA41848.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263683|gb|EGA47204.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265721|gb|EGA49217.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270165|gb|EGA53613.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 951

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|294666092|ref|ZP_06731351.1| leucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604151|gb|EFF47543.1| leucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 880

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNRTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 29/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+         +G+  
Sbjct: 637 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGV---------DGMAR 687

Query: 361 LVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R    + K             A T   ++I       + ++ ++   +   + A+A 
Sbjct: 688 FMRRLWVQVHKHVGEGAAAALDVAALTAEQKAIRRKTHETIGKVSDDYGRRHSFNTAIAA 747

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L + + ++ D            ++   V     E +  + +LL    P  ++ ++ +
Sbjct: 748 VMELSNALAKFDDIS----------EQGRAVRQ---EALEAMVLLLNPITPHASHALWQV 794

Query: 477 LFVAD---ENRCFQSLD 490
           L   +   EN  F   D
Sbjct: 795 LGRGETLLENVAFPQAD 811


>gi|294624223|ref|ZP_06702939.1| leucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601476|gb|EFF45497.1| leucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 880

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNRTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 29/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+         +G+  
Sbjct: 637 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGV---------DGMAR 687

Query: 361 LVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R    + K             A T   ++I       + ++ ++   +   + A+A 
Sbjct: 688 FMRRLWVQVHKHVGEGAAAALDVAALTAEQKAIRRKTHETIGKVSDDYGRRHSFNTAIAA 747

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L + + ++ D            ++   V     E +  + +LL    P  ++ ++ +
Sbjct: 748 VMELSNALAKFDDIS----------EQGRAVRQ---EALEAMVLLLNPITPHASHALWQV 794

Query: 477 LFVAD---ENRCFQSLD 490
           L   +   EN  F   D
Sbjct: 795 LGRGETLLENVAFPQAD 811


>gi|192359270|ref|YP_001981853.1| valyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685435|gb|ACE83113.1| valyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 954

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/402 (16%), Positives = 133/402 (33%), Gaps = 87/402 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 373 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFAWMRD-IQDWCISRQ-LWW 430

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 431 GHRIPAWYDASGKVYVGRNEAEVRQKYNVGTDVSLHQDEDVLDTWFSSGLWTFSTLGWPE 490

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +         A +P             
Sbjct: 491 QTEFLKRFH-PTDVLVTGFDIIFFWVARMIMLTMHLVKHEDGTAQIPFKTVYVHGLVRDS 549

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
           +G+K+SKS GNV+DP+++                                     I+  G
Sbjct: 550 QGQKMSKSKGNVLDPLDIVDGIDLETLVQKRTTGLMNPKDAAKIEKQTRKEFPEGIQAYG 609

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--T 379
            DALR+      + G+D  +D   ++     +  N I N  +R V M  +D D      T
Sbjct: 610 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWN-ATRYVLMQCEDQDCAQDGTT 666

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WE 435
               + +D  I+S      + + E +    +  A   +   V     D Y +  KP  W+
Sbjct: 667 DYQLSVADRWIVSKLQLAEKAVIEALDTYRLDLAAQAIYEFVWNEYCDWYLELSKPVLWD 726

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             + N           + V+  +  L    +P +  +I+  +
Sbjct: 727 KSEENTALRKGTRRTLIRVLETILRLAHPLMPFITEEIWQKI 768



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH +   + D L R+ R+ G   L+  GTD  G       + 
Sbjct: 33  ESYCIMIPPPNVTGSLHMGHGFNNAVMDALIRYQRMKGKSTLWQPGTDHAGIATQMVVER 92

Query: 65  A----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                                  + +Q     +R  R +   +D S + F  T +     
Sbjct: 93  QLAAQNISRHDLGRENFLNKVWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDDGLST 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 151 AVQEAFVRLYEDGLIYRGKRLVNWDPKLHTAISDLEVENHDEKGHLWHLRYPL 203


>gi|317405767|gb|EFV86058.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 885

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   +  ++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPEYYKWNQWLFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E  GY+ R++ Y D+LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPGYYLRITDYADELLGA 211

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            ++         R   E       GL+     + T   G  I D   Y+     D 
Sbjct: 212 VQNDLPGWPERVRLMQENWIGKSEGLRFAFPHQITGQDGQLIQDGKLYVFTTRADT 267



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 103/343 (30%), Gaps = 72/343 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS +  +     +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCACPSCGKPARRETDTMDTFVDSSWYFMRYTSPGNNTAMVDARNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHK-------------- 299
               H +Y   +         L+ + P  K      V +H +                  
Sbjct: 552 HAVLHLLYARFWTKVMRDMGLLNFDEPFTKLLCQGMVLNHIYSRKNAQGGIEYFWPEEVE 611

Query: 300 ----------GEK---------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                     G K               +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NVYDARGAITGAKLKSDGSEVTYGGVGTMSKSKNNGVDPQSLIDTLGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +   +   G++   N  L       +S +    +               + + +    
Sbjct: 672 PEQTLEWSDSGVEGS-NRFLRRLWS--ISYAQRDAIARGLAAGADWTDAPAAVKDLRREV 728

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +L++   + Q    +  ++  + +++ +D   DA+ P         + +       E 
Sbjct: 729 YNLLKQADYDYQRIQYNTVVSACMKMLNAID---DAKLP---------QGAHADAAYAET 776

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE-----NRCFQSLDQR 492
           +  L  +L   VP +  +++  L  A E     +  +  +D+ 
Sbjct: 777 LGVLLRVLYPVVPHITWQLWRDLGYAHELGDLLDAPWPHVDEA 819


>gi|330899521|gb|EGH30940.1| valyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 948

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNKLGPEVALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFAEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|299133187|ref|ZP_07026382.1| leucyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298593324|gb|EFI53524.1| leucyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 873

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYRRAKGHNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     + +S D    I T + +++   + ++      G + +
Sbjct: 93  QNKTHPAKWTYANIATMKKQLKSMGLSLDWAREIATCDPKYYKHQQRMFLDFLKAGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E   +FF++S Y ++LLS  +
Sbjct: 153 KQSKVNWDPVDQTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISDYSEELLSALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +            GL
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGL 231



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 15/178 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP ++I   G D  R+F++ +    +D  + ++G++       AN    
Sbjct: 629 EKMSKSKRNTIDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVQG------ANRFVQ 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R V++           P    +  + + +   R L ++ + ++    + A+A++ + 
Sbjct: 683 RVWRLVNLAAPHLPKASAVPSGNGDV-KPLRASAHRTLADVSQAIERLRFNTAIAKLYTF 741

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V  +    D  +     KT+P  A+ V     E +  L  ++   +P LA + ++ L 
Sbjct: 742 VGTLAEAIDDAR----LKTDPAFAAAVR----EALDILIRMISPMMPHLAEQCWEALG 791


>gi|88811892|ref|ZP_01127145.1| Leucyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88790776|gb|EAR21890.1| Leucyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 867

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA 
Sbjct: 37  RPSYYCLSMFPYPSGKLHMGHVRNYTIGDVVARYQRMLGRNVLQPMGWDAFGLPAENAAI 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +  QN    R     L   YD    I T E  ++   + L+ ++  KG +YK
Sbjct: 97  QNRVPPAQWTRQNITYMRRQLKRLGFGYDWHREIATCEPSYYRWEQWLFTRLFRKGLVYK 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V  G   +   A    V+      +F +++AY D+LL   +
Sbjct: 157 KTATVNWDPVDQTVLANEQVIDGKGWRSGAA----VERRAIPQWFLKITAYADELLGALD 212

Query: 182 SHPEFILPIERRNEVISFVKSG 203
             P +   ++           G
Sbjct: 213 ELPGWPEQVKTMQRNWIGRSEG 234



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 22/193 (11%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N +DP  ++E  G D +R F++      +   +    ++       A      +
Sbjct: 627 MSKSKNNGVDPQALVERFGADTVRLFILFAAPPEQALEWSDSAVEG------AYRFLKRL 680

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLV 421
              V   + D     P P   T   +++       +Q+  +++  +   + A+A V+ L 
Sbjct: 681 WNLVLAHVTDGPARAPEPAQLTPPQQAMRRKIHETIQKASDDVGRRFTFNTAIAAVMELA 740

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + + R+            + D+   V     E +    ++L   VP +A++++  L  +D
Sbjct: 741 NALSRF----------DDSSDQGRAVRQ---EGLEASVLILAPMVPHIAHRLWYELGHSD 787

Query: 482 E--NRCFQSLDQR 492
              +  + ++D+ 
Sbjct: 788 AVVDAEWPTVDEA 800


>gi|330988299|gb|EGH86402.1| valyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009012|gb|EGH89068.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 941

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++    +  +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 362 TIIEPWLTDQWYVSTKSLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 419

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 420 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEVALQQDNDVLDTWFSSGLWTFSTLGW 479

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 480 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 538

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 539 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFAEGIAS 598

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 599 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 653

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 654 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 713

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 714 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 755



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 27  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 86

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 87  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 144

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 145 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 194


>gi|188990937|ref|YP_001902947.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732697|emb|CAP50891.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 906

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 55  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 114

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 115 AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 174

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 175 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 230

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 231 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTTGAAL----DPLRVFTTRPDTLMG 284



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/512 (14%), Positives = 147/512 (28%), Gaps = 93/512 (18%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 357 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQAWDATQWRDWYTDKS 415

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 416 RELELINSAEFDGLDYHGAFEALAERFERKGQGQRRINYRLRDWGVSRQRYWGCPIPVIY 475

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       + G  
Sbjct: 476 CAKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGP 523

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+    +    +A +W PADL+V G +    H +Y+ 
Sbjct: 524 AERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFR 581

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                      
Sbjct: 582 FYHKLMRDARLVDSDEPVTNLLTQGMVIAETFYRDADNGGKDWINPADVEIQRDERGRVV 641

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 642 GASLIADGQPVHIGGTEKMSKSKNNGVDPQAMVAKYGADTVRLFSMFAAPPEQSLEWNEA 701

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           G+    R    L   +   V      I  +   ++   G  +   ++I       + ++ 
Sbjct: 702 GVDGMARFMRRLWVQVHKHVG---EGIDDELTKIVALGGPLSAEQKAIRRKTHETIGKVD 758

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L +             L K +   A     V  E +  + +L
Sbjct: 759 DDYGRRHSFNTAIAAVMELSNA------------LAKFDDASAQG-RAVRQEALEAMVLL 805

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   EN  F  +D
Sbjct: 806 LNPITPHASHALWQVLGRGETLLENVPFPQVD 837


>gi|71892094|ref|YP_277824.1| leucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123761476|sp|Q492Z3|SYL_BLOPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71796200|gb|AAZ40951.1| leucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 872

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  + I YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 30  SNKEKYYCLSMIPYPSGNLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEHA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A        ++   N    +     L  +YD    + T    ++   +  +  +  KG +
Sbjct: 90  AIKNNTDPSIWTYSNINYMKSQLQSLGFAYDWNRELITCHPDYYRWEQWFFTVLYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +    +    +++V            H PV++     +F R++ Y D+LL  
Sbjct: 150 YKKTASVNWCSYHKTVLANEQVTNN----CCWRCHTPVKYKRIPQWFIRITNYADQLLHG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDQLTHWPEQVKIMQRNWIGRSKG 229



 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +IE+ G DA+R+F++          + + G++       A      
Sbjct: 631 KMSKSKNNGIDPNIIIEKYGADAVRFFIMFAAPIEAPLEWKESGIEG------AQRFLKR 684

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           +   +   ++D      +      + + I     + ++++ +++  +   + AL+ ++ L
Sbjct: 685 IWNLIYHHIQDGPVDALSVVILNHAQKFIRYNVHKTIEKVTDDIDRRQSFNTALSAIMKL 744

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V ++        P   K +  DRA     V  E +  +  LL  F P ++  ++  L  +
Sbjct: 745 VKKLYN-----AP---KTSMQDRA-----VLQEALLVIVRLLYPFTPHISFILWKALGGS 791

Query: 481 D--ENRCFQSLDQR 492
           +  +N  +  +D +
Sbjct: 792 EDIDNATWPIVDTQ 805


>gi|26987713|ref|NP_743138.1| valyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81442021|sp|Q88P76|SYV_PSEPK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24982401|gb|AAN66602.1|AE016288_1 valyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 948

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 126/401 (31%), Gaps = 89/401 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDEAGQVYVGRNEEEVRAKHKLGADVVLRQDDDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   ++      A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +RA       V V+     L   F+P +  +I+  +
Sbjct: 722 ENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRI 762



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AKGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|167031998|ref|YP_001667229.1| valyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166858486|gb|ABY96893.1| valyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 126/401 (31%), Gaps = 89/401 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDEAGQVYVGRDEAEVRTKHNLGADVVLRQDDDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   ++      A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +RA       V V+     L   F+P +  +I+  +
Sbjct: 722 ENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRI 762



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AKGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|148546258|ref|YP_001266360.1| valyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148510316|gb|ABQ77176.1| valyl-tRNA synthetase [Pseudomonas putida F1]
 gi|313497344|gb|ADR58710.1| ValS [Pseudomonas putida BIRD-1]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 126/401 (31%), Gaps = 89/401 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDEAGQVYVGRNEEEVRAKHKLGADVVLRQDDDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 QTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++++                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   ++      A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +RA       V V+     L   F+P +  +I+  +
Sbjct: 722 ENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRI 762



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G D L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AKGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|307543943|ref|YP_003896422.1| valyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307215967|emb|CBV41237.1| valyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 132/394 (33%), Gaps = 81/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +       ++  E+     +P    N   S+++  L+D  +SR+   W
Sbjct: 372 IEPYLTDQWFVAVENLAKPAIAAVENGDIEFVPKNYENMYFSWMRD-LQDWCISRQ-LWW 429

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +      T G+ +
Sbjct: 430 GHRIPAWYDAEGNVYVARTEAEARDKHGLPADVPLTQDEDVLDTWFSSGLWTFGTLGWPE 489

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  +    P+ + V G DI+ F    +       +  +P  +          +G K+S
Sbjct: 490 KTEALETFH-PSSVLVTGFDIIFFWVARMIMLTLEFTGEVPFKQVYVHGLVRDGQGNKMS 548

Query: 305 KSLGNVIDPIEVIEEV-------------------------------------GVDALRY 327
           KS GNV+DPI++I+ +                                     G DALR+
Sbjct: 549 KSKGNVLDPIDLIDGIDLESLVEKRTGNMMQPQKAKAIAKATRQEFPEGIEPHGTDALRF 608

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
             + +   G+D  +D   L      +  N + N  SR V M  +  D     +    + +
Sbjct: 609 TFLSQATTGRDIKFDMGRLDG--YRNFCNKLWN-ASRYVLMNAEGQDCGADGSEVELSLA 665

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--PD 442
           D  I+S   +   ++   M+      A   +   +     D Y +  KP  L   +  P+
Sbjct: 666 DRWIISRLQQTEAQVTRAMEEYRFDHASQALYEFIWNEYCDWYLELSKP-VLWDDDATPE 724

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                    V V+  +  L    +P ++ +I+  
Sbjct: 725 SQRGTRRTLVRVLEAILRLAHPMMPYISEEIWQR 758



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G       
Sbjct: 29  EGEPYSIMIPPPNVTGSLHMGHAFQDTIMDTLTRWRRMQGRNTLWQVGTDHAGIATQMLV 88

Query: 63  Q---------------NAGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKR 101
           +                   T K++  ++      +R  R M   +D S + F  T +  
Sbjct: 89  ERKVAAEEGKSRHDLGREAFTDKIWEWKHESGGHITRQLRRMGASVDWSRERF--TMDDG 146

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +   + ++ ++ DKG IY+G     +        +D EV        +     P+
Sbjct: 147 FYKAVQEVFVQLFDKGLIYRGKRLVNWDPTLHTAISDLEVENRDQQGQFWHFRYPL 202


>gi|323527344|ref|YP_004229497.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384346|gb|ADX56437.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 863

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 30  TDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V +G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIEG----RGWRSGALVEKREIPMYYMRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            E           +   I
Sbjct: 206 LEGLGWPERVKIMQQNWI 223



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 67/195 (34%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++         G   
Sbjct: 622 EKMSKSKNNGVDPQSLIDQHGADTARLFVMFAAPPEQQLEWSGSGVE---------GASR 672

Query: 361 LVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    +   +            ++D+ +      VL++   + Q    +  ++ 
Sbjct: 673 FLRRVWSFAHANEAALRAGGQFDAAQLGDADKLLRREIYSVLKQADFDYQRLQYNTVVSA 732

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                     +  V  E    +  +L   VP L  +++  
Sbjct: 733 AMKMLNALDG----------------AKGALPAVLRETYGVMLRVLYPVVPHLTFQLWQE 776

Query: 477 LFVADENRCFQSLDQ 491
           L  ADE         
Sbjct: 777 LGYADEFGSLLDAPW 791


>gi|198412086|ref|XP_002127207.1| PREDICTED: similar to methionine-tRNA synthetase, partial [Ciona
           intestinalis]
          Length = 280

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 5/191 (2%)

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           D  R++L+     G+D  +       + N++L N +GN ++RS+  +   Y G++P P  
Sbjct: 2   DIWRFYLLSMRPEGQDTHFSWSDFLLKNNSELLNNLGNFINRSLKFVSNAYGGVVPDP-V 60

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK---T 439
              +D  +L++ +R L++   +M    I   L +++S+    ++Y    +PW+L K    
Sbjct: 61  LNNTDLELLALVNRELKDYVTDMDKLKIRDNLRRILSISRLGNQYLQENQPWKLIKGSNE 120

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
           +  RASTV  +   +   L IL+  ++P+ ++ I D L +        ++ + L  G  +
Sbjct: 121 DKSRASTVTSIAANLSCLLCILIHPYMPQTSSIIQDQLNLRGGYLIPDAITRMLPSGHKI 180

Query: 500 HKTFDPIFPRF 510
           +K   P+F + 
Sbjct: 181 NKP-SPLFRKL 190


>gi|161617770|ref|YP_001591735.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|161367134|gb|ABX70902.1| hypothetical protein SPAB_05633 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 951

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|66767823|ref|YP_242585.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|66573155|gb|AAY48565.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 900

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 55  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 114

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 115 AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 174

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 175 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 230

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 231 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTTGAAL----DPLRVFTTRPDTLMG 284



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 71/512 (13%), Positives = 145/512 (28%), Gaps = 99/512 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 357 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQAWDATQWRDWYTDKS 415

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 416 RELELINSAEFDGLDYHGAFEALAERFERKGQGQRRINYRLRDWGVSRQRYWGCPIPVIY 475

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       + G  
Sbjct: 476 CAKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGP 523

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+    +    +A +W PADL+V G +    H +Y+ 
Sbjct: 524 AERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFR 581

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                      
Sbjct: 582 FYHKLMRDARLVDSDEPVTNLLTQGMVIAETFYRDADNGGKDWINPADVEIQRDERGRVV 641

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 642 GASLIADGQPVHIGGTEKMSKSKNNGVDPQAMVAKYGADTVRLFSMFAAPPEQSLEWNEA 701

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           G+    R    L   +   V    + +            + +   ++I       + ++ 
Sbjct: 702 GVDGMARFMRRLWVQVHKHVGEGAAAL---------DVASLSAEQKAIRRKTHETIGKVD 752

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L +             L K +   A     V  E +  + +L
Sbjct: 753 DDYGRRHSFNTAIAAVMELSNA------------LAKFDDASAQG-RAVRQEALEAMVLL 799

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   EN  F  +D
Sbjct: 800 LNPITPHASHALWQVLGRGETLLENVPFPQVD 831


>gi|114330617|ref|YP_746839.1| valyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314389|sp|Q0AIF2|SYV_NITEC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|114307631|gb|ABI58874.1| valyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 917

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 130/394 (32%), Gaps = 77/394 (19%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
            +  ++ M  + ++  +     + L+  ES     +P      V +     ++D  +SR+
Sbjct: 352 TNTVIEPMLTDQWYLAMEGLAKQGLAAVESGQVRFVPENWA-HVYNQWLENIQDWCISRQ 410

Query: 213 TFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYL 245
              WG  I    D                            ++  W  +     +T G+ 
Sbjct: 411 -LWWGHRIPAWYDEDGNVIVAYDLEEARKLSGKENLHQDEDVLDTWFSSALWPFSTLGWP 469

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +     K    P  + V G DI+ F    +   +   +  +P  +   +      +G+K+
Sbjct: 470 EQTPELKTFL-PGSVLVTGFDIIFFWVARMVMMSLHFTGEVPFREVYITGLIRDAEGQKM 528

Query: 304 SKSLGNVIDPIEVIEE-------------------------------------VGVDALR 326
           SKS GNV+DP+++I+                                       G DALR
Sbjct: 529 SKSKGNVLDPLDLIDGVALTELIRKRTTGLMNPKQAESIEKATRKQFPQGIPAFGADALR 588

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFT 384
           +      + G+D  +D    +     +  N + N  +R V M    KD       P  F+
Sbjct: 589 FTFASLASHGRDIKFDLQRCEG--YRNFCNKLWN-ATRFVLMNCEGKDTGLDEGLPLNFS 645

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
            +D+ I+    +  Q + +         A  ++   + +   D Y +  K  +L   +  
Sbjct: 646 PADKWIIGRLQQAEQSVIQAFNEYRFDLAAREMYEFIWDEYCDWYVELAKV-QLNSEDEA 704

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R        V V+  +       +P +  +++  
Sbjct: 705 RQRATRRTLVRVLETVLRQAHPIIPFITEELWQA 738



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 24/177 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------- 59
              +  PN     H+GHA++  + D L R+HR+ G + L+  GTD  G            
Sbjct: 38  CIMLPPPNVTGTLHMGHAFQHTLMDALIRYHRMLGDNTLWQPGTDHAGIATQIVVERQLD 97

Query: 60  -----------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      +A        K       +R  R M    D S + F  T ++       
Sbjct: 98  QEGKDRRQMGREAFLERVWQWKEESGSTITRQMRRMGTSCDWSRERF--TMDEVLSRAVT 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
            ++ ++  +G IY+G     +    +   +D EV    +         P +   E G
Sbjct: 156 EVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLEVVSVEEQGSLWHILYPFEHRAENG 212


>gi|304382120|ref|ZP_07364631.1| valine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336718|gb|EFM02943.1| valine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 879

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 128/387 (33%), Gaps = 58/387 (14%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    H P++      +F ++  + D  L           P + +N 
Sbjct: 331 LMEKVEDYDNKVGYSERTHVPIEPKLSTQWFLKMQHFADLALQPVMDDDIRFYPQKYKNT 390

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 391 -YHHWLENIKDWCISRQ-LWWGHRIPAYYFTVDGKREYVVAPSAEEALTKAKQKCNALTA 448

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYW 275
                 +  +  W  +    ++    +++PD    K++ P    V G DI+ F    +  
Sbjct: 449 TDLQQDEDCLDTWFSSWLWPISVFDGINHPDNEDIKYYYPTSDLVTGPDIIFFWVARMIM 508

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     +P     F+       G K+SKSLGN  DPIE+I++ G D +R  ++     
Sbjct: 509 AGYEYKCKMPFKNVYFTGIVRDKLGRKMSKSLGNSPDPIELIDKYGADGVRMGMMLSAPA 568

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+   ++  N        N +  +  ++            A   +     +   
Sbjct: 569 GNDILFDETLCEQGRN------FNNKIWNAFRLVKGWEVADTEQSDASRIASRWFEAKLR 622

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV- 454
              +E+ +      I  AL  V  L      ++D    W L+   P   + +  V+  + 
Sbjct: 623 ETNEELNDLFSKYRISEALMVVYRL------FWDEFSGWYLEMIKPAYGTAIDRVSYNIT 676

Query: 455 ---IRQLAILLQAFVPKLANKIFDILF 478
                 L  +L  F+P +  +++  LF
Sbjct: 677 LRFFETLLNMLHPFMPFITEELWQHLF 703



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 33  TREPYTIVMPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 92

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                                    + +++          L  S D      T ++   +
Sbjct: 93  VAKLAEQGIKKTDMTRDEFLKHAWDWTNEHGGIILKQLRRLGASCDWNRTAFTMDEERSN 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + DKG IY+G     +  + +   +D+EV    + 
Sbjct: 153 SVIKVFCDLYDKGFIYRGVRMVNWDPQAQTALSDEEVIYKEEH 195


>gi|171920754|ref|ZP_02931957.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185179054|ref|ZP_02964793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024300|ref|ZP_02996988.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188524452|ref|ZP_03004463.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867607|ref|ZP_03079609.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273678|ref|ZP_03206213.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554355|ref|YP_002284667.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225551246|ref|ZP_03772192.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903504|gb|EDT49793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209039|gb|EDU06082.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018974|gb|EDU57014.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|195659607|gb|EDX52987.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660664|gb|EDX53919.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249706|gb|EDY74487.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541856|gb|ACI60085.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379061|gb|EEH01426.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 874

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 133/359 (37%), Gaps = 35/359 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++       +      + +      R N+ +       +D  +SR+   
Sbjct: 354 VEPYLSYQWFIKMDNLVKNTIKMQNDFNDKVDFYPNRFNKTLLTWLENTEDWCISRQ-LW 412

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +    L TT +  N    K
Sbjct: 413 WGHQIPVWYHKKTNEIYCNTTPPKDLENWIQDEDVLDTWFSSGMWPLLTTKWNSNDQFFK 472

Query: 253 AKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P  L V G DIL F        +  L    P    +        +G+K+SKSLGN 
Sbjct: 473 -RYFPTALMVTGMDILFFWVSRMMNFSQYLVQKRPFKDVLIHGLIRDAQGKKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP ++I E G+D +R F       G+D  +  + L    N +  N I N+     ++  
Sbjct: 532 IDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLGA--NWNYLNKIWNIAKYIENLDE 589

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
            +    I     F + ++ I++  S++  E+ +NM    +  A   +   +       Y 
Sbjct: 590 INESFSIQDVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVVATKDLYDFIWNTFASNYL 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K   +   +    +  +     V  Q+ I+L  F P ++ +I+  L   +E+   Q
Sbjct: 650 EYTK---VLLQDTTFKNETIKTIRYVFNQILIMLHPFAPNISEEIWLNLNQTNESILLQ 705



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHAY+  + D+L R+ +L G D     GTD  G      
Sbjct: 34  STKPPFAIVLPPPNVTGHLHIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAGIATQTK 93

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRH 102
            +    T                  K++ D+ +       +   L + Y++++ T ++  
Sbjct: 94  FEKILKTNEQVDRFVLGRKAFLEKLKIWKDEQTYYIHKQWNALGLGLDYNNYLFTLDEPV 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             T R ++ K+ ++  IY+      + ++ +   ++ EV  
Sbjct: 154 VQTVREVFVKMFNENIIYRAKKLVNWDIQLKTAISNIEVIH 194


>gi|83309126|ref|YP_419390.1| leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123768100|sp|Q2WBE4|SYL_MAGMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82943967|dbj|BAE48831.1| Leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 862

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 38  GKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGFNVLHPMGWDAFGLPAENAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R+    + +SYD    + T E  ++   + ++      G +Y
Sbjct: 98  IQNNVHPAKWTRENIAAMREQLKSMGLSYDWRREVATCEPEYYRHEQKMFLDFLKAGLVY 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   +     +++V  G            V+      +F +++AY   LL   
Sbjct: 158 RKESWVNWDPVENTVLANEQVIDG----RGWRSGALVEKRLLSQWFLKITAYAQDLLDSL 213

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
            +   +   +    E       G
Sbjct: 214 ATLERWPERVRLMQENWIGRSEG 236



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 77/196 (39%), Gaps = 25/196 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP  +I+  G D  R F++ +    +D  + + G+         +G   
Sbjct: 624 EKMSKSKKNVVDPAGIIDGYGADTARLFMLSDSPPERDLDWTEAGI---------DGAWR 674

Query: 361 LVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            V+R   M+   +           +     I  +  + + ++ E+++    ++A+A++  
Sbjct: 675 YVNRLWRMVATAELPPAGAPMPELSPEAAKIRRLLHKTIAQVGEDLERFHFNKAVARIRE 734

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           + + +                P   S   +V  E +   A L+   +P LA +++  L  
Sbjct: 735 MTNGL-------------GELPAGDSGAAWVLREGLEATARLIGPMMPHLAEEMWLALGG 781

Query: 480 AD--ENRCFQSLDQRL 493
           +       +   D  L
Sbjct: 782 SGLLAEAAWPEADPAL 797


>gi|319639015|ref|ZP_07993773.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399919|gb|EFV80582.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 936

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 693 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 746

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G     ++  + +         ++ ++  + Q  + A+A 
Sbjct: 747 RLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 806

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++  TV     EV+  +  LL   VP +   ++  
Sbjct: 807 VMELLNQYDK----------TDTGSEQGRTV---AQEVLEAVVRLLWPIVPHICETLWSE 853

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 854 LNGAKLWEAGWPTVDEA 870


>gi|302188390|ref|ZP_07265063.1| valyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|226940042|ref|YP_002795115.1| valyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254783554|sp|C1D6J9|SYV_LARHH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|226714967|gb|ACO74105.1| Syv [Laribacter hongkongensis HLHK9]
          Length = 937

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 118/369 (31%), Gaps = 77/369 (20%)

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY-------- 226
           +   ES     +P    N   +   + ++D  +SR+   WG  I    D           
Sbjct: 397 IDAVESGEVRFVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGKAYVGRTL 454

Query: 227 -----------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                            ++  W  +     ++ G+ +     KA   P+ + V G +I+ 
Sbjct: 455 EEVQAKAPGKTLRRDEDVLDTWFSSALVPFSSLGWPNETPELKAFV-PSQVLVTGYEIIF 513

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------- 319
           F    +          +P            H+G+K+SKS GNVIDP+++I+         
Sbjct: 514 FWVARMIMMTTHFLGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIALPELIT 573

Query: 320 -----------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                                         G DALR+ +    + G+   +D        
Sbjct: 574 KRTTGLRRPEKAPQIVKATEKLFPEGIPAYGTDALRFTMASYASLGRSVNFDFKR--AEG 631

Query: 351 NADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             +  N + N  +R V M +  KD       P  ++  D+ I+S    +   + E +   
Sbjct: 632 YRNFCNKLWN-ATRFVMMNVEGKDCGQDESLPLEYSFVDKWIISRLQELEAAVTEALDTY 690

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               A   +   V     D Y +  K  +L   N  +        V V+     L    +
Sbjct: 691 RFDMASQLIYEFVWNEYCDWYVELAKV-QLANGNEAQQRATRRTLVRVLEVALRLTHPLM 749

Query: 467 PKLANKIFD 475
           P +  +++ 
Sbjct: 750 PFITEELWQ 758



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R    I           H+GHA+   I D L R++R+ G + L+  G D  G      
Sbjct: 32  TDRPSFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGDNTLWVPGADHAGIATQIV 91

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++          +  S  +D    T + +  
Sbjct: 92  VERQLAEQGVSRHDLGRDTFIGKVWEWKEKSGGTITSQMRRVGCSVDWDKEYFTMDDKMS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                ++ ++ ++G IY+G     +  +     +D EV    +         P
Sbjct: 152 TAVTEVFVRLYEQGLIYRGKRLVNWDPKLGTAVSDLEVISEEEDGKMWHIRYP 204


>gi|218263532|ref|ZP_03477613.1| hypothetical protein PRABACTJOHN_03300 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222655|gb|EEC95305.1| hypothetical protein PRABACTJOHN_03300 [Parabacteroides johnsonii
           DSM 18315]
          Length = 875

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 125/375 (33%), Gaps = 58/375 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L           P + +N         +KD  +SR+   
Sbjct: 351 PIEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPPKFKNT-YRHWMENIKDWCISRQ-LW 408

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       + ++  W  +    +
Sbjct: 409 WGHRIPAYFLPEGGYVVAETAEKALEMAKEKTGNASLTMTDLRQDEDVLDTWFSSWLWPI 468

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    +++PD  +   ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 469 SLFNGINDPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKMPFKNVYFTGIVR 528

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D    ++  N     
Sbjct: 529 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMMAAPAGNDIPFDDALCEQGRN----- 583

Query: 357 GIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
              N +  +  +I     D  I  P A   + +       + + E+ +      +  A+ 
Sbjct: 584 -FNNKIWNAFRLIKGWTVDSTIEQPEAAATAVKWFKMQLDKTIAEMDDLFGKYRLSEAMM 642

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY----VTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P     V       T+     L  LL  F+P +  
Sbjct: 643 AVYKL------FWDEFSSWYLEMVKPAYGQPVDKSTYLSTLGFFDALLRLLHPFMPFITE 696

Query: 472 KIFDILFVADENRCF 486
           +++  L    E    
Sbjct: 697 ELWQALEPRKEGESL 711



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILIRRARMQGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNRLAQQGIKKTDLTREDFLKHAWEWKEEHGGIILKQLRKLGASCDWDRTAFTMDELRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYEKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNTW 240


>gi|188577786|ref|YP_001914715.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689568|sp|B2SWH2|SYL_XANOP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|188522238|gb|ACD60183.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 880

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 74/513 (14%), Positives = 152/513 (29%), Gaps = 100/513 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQRWDATEWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDFGGAFEALAERFERKGQGQRRVNYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       D G  
Sbjct: 455 CPKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTEPT------------WRQTTCPDCGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+         +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNAREMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                     +
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIADTFYRDADNGGKDWINPADVEIQRDERGRVT 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GAVLIADGQPVHIGGTEKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEI 401
           G+         +G+   + R  + + K       +     A +   ++I       + ++
Sbjct: 681 GV---------DGMARFMRRLWAQVHKHVGEGAAVALDVAALSAEQKAIRRKTHETIGKV 731

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            ++   +   + A+A V+ L + + ++ DA        ++  RA     V  E +  + +
Sbjct: 732 SDDYGRRHSFNTAIAAVMELSNALAKFDDA--------SDQGRA-----VRQEALEAMVL 778

Query: 461 LLQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           LL    P  ++ ++ +L   +   EN  F   D
Sbjct: 779 LLNPITPHASHALWQVLGRGETLLENVAFPQAD 811


>gi|119713330|gb|ABL97394.1| leucine-tRNA synthetase [uncultured marine bacterium EB80_02D08]
          Length = 804

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +REK Y  +   YP+ + H+GH     I DV++R+ R++  +V    G D  G     AA
Sbjct: 30  DREKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V+ K + +QN  + +     L + YD    +RT E  ++   ++++KK  D   +Y
Sbjct: 90  IANKVSPKEWTNQNIEHMKQQLISLGLGYDWSKELRTCEPEYYKWEQLIFKKFYDNNLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V  G   +        V+  E + +F +++ Y ++LL+  
Sbjct: 150 RKKSMVNWDPVDETVLANEQVIDGKGWRSGAQ----VEIKEIDQWFIKITDYAEELLTSL 205

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 206 DEVDWPENVKTMQRNWI 222



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 107/260 (41%), Gaps = 32/260 (12%)

Query: 228 MYVWIDALTNYLTTT--GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
              ++D+   Y   T     D      +K+W P DL++ G +    H +Y   F      
Sbjct: 478 FDTFMDSSWYYARFTSSDNADQMFDKNSKYWLPVDLYIGGIEHAILHLLYSRFFHKALRD 537

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +  N P  KK+ + G +L  G K+SKS GN +DP   IE+ G D +R +++      
Sbjct: 538 MGLVEGNEPF-KKLLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMMFTAPPE 596

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   + +  ++    +     I NLV+       + ++  I  P   +E ++++      
Sbjct: 597 QSLEWSESSVEGA--SRFMKKIWNLVN------ERKFE-KIEEPLNLSEEEKNLRRKVHS 647

Query: 397 VLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            L+++  + +     + A+A ++ LV+ +        P   K+ +   ++   +   E I
Sbjct: 648 TLKKVTSDFETRYSFNTAIAAIMELVNSI--------PESFKQNDVSSSN--KFCLNEAI 697

Query: 456 RQLAILLQAFVPKLANKIFD 475
             +   L    P ++  ++ 
Sbjct: 698 VIILKTLNPISPHISQHLWK 717


>gi|330969239|gb|EGH69305.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRQTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKPESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|289623820|ref|ZP_06456774.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649171|ref|ZP_06480514.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867841|gb|EGH02550.1| valyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDETEVRAKNNLGPEISLQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFAEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGISRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|225550367|ref|ZP_03771316.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379521|gb|EEH01883.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 874

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 133/359 (37%), Gaps = 35/359 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++       +      + +      R N+ +       +D  +SR+   
Sbjct: 354 VEPYLSYQWFIKMDNLVKNTIKMQNDSNDKVDFYPNRFNKTLLTWLENTEDWCISRQ-LW 412

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +    L TT +  N    K
Sbjct: 413 WGHQIPVWYHKKTNEIYCNTTPPKDLENWIQDEDVLDTWFSSGMWPLLTTKWNSNDQFFK 472

Query: 253 AKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P  L V G DIL F        +  L    P    +        +G+K+SKSLGN 
Sbjct: 473 -RYFPTALMVTGMDILFFWVSRMMNFSQYLVQKRPFKDVLIHGLIRDAQGKKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP ++I E G+D +R F       G+D  +  + L    N +  N I N+     ++  
Sbjct: 532 IDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLGA--NWNYLNKIWNIAKYIENLDE 589

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
            +    I     F + ++ I++  S++  E+ +NM    +  A   +   +       Y 
Sbjct: 590 INESFSIQNVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVVATKDLYDFIWNTFASNYL 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K   +   +    +  +     V  Q+ I+L  F P ++ +I+  L   +E+   Q
Sbjct: 650 EYTK---VLLQDTTFKNETIKTIRYVFNQILIMLHPFAPNISEEIWLNLNQTNESILLQ 705



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHAY+  + D+L R+ +L G D     GTD  G      
Sbjct: 34  STKPPFAIVLPPPNVTGHLHIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAGIATQTK 93

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRH 102
            +    T                  K++ D+ +       +   L + Y++++ T ++  
Sbjct: 94  FEKILKTNEQVDRFVLGRKAFLEKLKIWKDEQTYYIHKQWNALGLGLDYNNYLFTLDEPV 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             T R ++ K+ ++  IY+      + ++ +   ++ EV  
Sbjct: 154 VQTVREVFVKMFNENIIYRAKKLVNWDIQLKTAISNIEVIH 194


>gi|188518664|ref|ZP_03004101.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188997721|gb|EDU66818.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
          Length = 874

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 133/359 (37%), Gaps = 35/359 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYES-HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++       +      + +      R N+ +       +D  +SR+   
Sbjct: 354 VEPYLSYQWFIKMDNLVKNTIKMQNDFNDKVDFYPNRFNKTLLTWLENTEDWCISRQ-LW 412

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +    L TT +  N    K
Sbjct: 413 WGHQIPVWYHKKTNEIYCNTTPPKDLENWIQDEDVLDTWFSSGMWPLLTTKWNSNDQFFK 472

Query: 253 AKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P  L V G DIL F        +  L    P    +        +G+K+SKSLGN 
Sbjct: 473 -RYFPTALMVTGMDILFFWVSRMMNFSQYLVQKRPFKDVLIHGLIRDAQGKKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP ++I E G+D +R F       G+D  +  + L    N +  N I N+     ++  
Sbjct: 532 IDPFDIINEYGLDTMRLFFASSTTVGEDLNFSTERLGA--NWNYLNKIWNIAKYIENLDE 589

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
            +    I     F + ++ I++  S++  E+ +NM    +  A   +   +       Y 
Sbjct: 590 INESFSIQDVHEFCDVNKWIIAELSKLSVEMNKNMDKYNLVVATKDLYDFIWNTFASNYL 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  K   +   +    +  +     V  Q+ I+L  F P ++ +I+  L   +E+   Q
Sbjct: 650 EYTK---VLLQDTTFKNETIKTIRYVFNQILIMLHPFAPNISEEIWLNLNQTNESILLQ 705



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHAY+  + D+L R+ +L G D     GTD  G      
Sbjct: 34  STKPPFAIVLPPPNVTGHLHIGHAYDFTLPDILMRYKKLQGYDAFIVPGTDHAGIATQTK 93

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRH 102
            +    T                  K++ D+ +       +   L + Y++++ T ++  
Sbjct: 94  FEKILKTNEQVDRFVLGRKAFLEKLKIWKDEQTYYIHKQWNTLGLGLDYNNYLFTLDEPV 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             T R ++ K+ ++  IY+      + ++ +   ++ EV  
Sbjct: 154 VQTVREVFVKMFNENIIYRAKKLVNWDIQLKTAISNIEVIH 194


>gi|84624799|ref|YP_452171.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123752724|sp|Q2P0N0|SYL_XANOM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|84368739|dbj|BAE69897.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 880

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 73/513 (14%), Positives = 151/513 (29%), Gaps = 100/513 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQRWDATEWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDFGGAFEALAERFERKGQGQRRVNYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G                      +LP                    +    D G  
Sbjct: 455 CPKCGAVPVPED-----------QLPVVLPENVEFACTGSPIKTDPTWRQT-TCPDCGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+         +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNAREMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                     +
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIADTFYRDADNGGKDWINPADVEIQRDERGRVT 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GAVLIADGQPVHIGGTEKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEI 401
           G+         +G+   + R  + + K       +     A +   ++I       + ++
Sbjct: 681 GV---------DGMARFMRRLWAQVHKHVGEGAAVALDVAALSAEQKAIRRKTHETIGKV 731

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            ++   +   + A+A V+ L + + ++ DA        ++  RA     V  E +  + +
Sbjct: 732 SDDYGRRHSFNTAIAAVMELSNALAKFDDA--------SDQGRA-----VRQEALEAMVL 778

Query: 461 LLQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           LL    P  ++ ++ +L   +   EN  F   D
Sbjct: 779 LLNPITPHASHALWQVLGRGETLLENVAFPQAD 811


>gi|71734223|ref|YP_273420.1| valyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|90101544|sp|Q48MF2|SYV_PSE14 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71554776|gb|AAZ33987.1| valyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGISRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|71900312|ref|ZP_00682448.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
 gi|71729960|gb|EAO32055.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Xylella
           fastidiosa Ann-1]
          Length = 753

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 6/213 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G     A
Sbjct: 33  SNKPKYYCLSMLPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N    R     L   I++     T +  ++   + ++ ++  KG  
Sbjct: 93  AIKNKVAPAQWTYKNIERMRTQLKSLGYAINWSREFATCQPDYYVHEQHMFTRLMRKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E   +F R++ Y  +LL  
Sbjct: 153 YRRNALVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPQWFLRITDYAQELLDG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  ++  P++           GL+     R 
Sbjct: 209 LNTLDDWPEPVKTMQRNWIGRSEGLEIRFEVRD 241



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 56/435 (12%), Positives = 117/435 (26%), Gaps = 83/435 (19%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V+   G D+  Q+ A          +V   +  +N  +     D+  D +   T +    
Sbjct: 342 VMAVPGHDQRDQEFANKYGLPIR--QVIALKEPKNQDESTWEPDVWRDWYADKT-REFEL 398

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +  +  +G             R +   N      G   Q Y     PV +    G
Sbjct: 399 INSAEFDGLDYQGAFEVLAERFERQGRGQRRVNYRLRDWGVSRQRYWGCPIPVIYCPTCG 458

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                      +L    +      PI+   E                   + G     + 
Sbjct: 459 AVPVPENQLPVILPENVAFSGTGSPIKTDPEWRKT------------TCPECGGPAERET 506

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSA 282
                 ++++   Y   T         K   +  P D ++ G +    H +Y+  +    
Sbjct: 507 D-TFDTFMESSWYYARYTSPNAREMLDKRANYWLPVDQYIGGIEHAILHLMYFRFYHKLM 565

Query: 283 N----------------------LPLPKKVF-----------SHGFILHKGE-------- 301
                                      +K              +     +G         
Sbjct: 566 RDARLVDSDEPAINLLTQGMVIAETFYRKNPDGSKDWINPADVNVECDERGRITGATLIS 625

Query: 302 -----------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                      K+SKS  N +DP  ++ + G D +R F +      +   +++ G++   
Sbjct: 626 DGQPVLIGATEKMSKSKNNGVDPQIMVTKYGADTVRLFSMFAAPPEQSLEWNEAGVE--- 682

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENMQN 407
                 G+   + R  + +         T    T  D   ++I       +  + ++   
Sbjct: 683 ------GMARFLRRLWTQVHHHASHGPATALDITALDTAQKAIRCKTHNTIARVEDDYGR 736

Query: 408 QL-IHRALAQVISLV 421
           +   + A+A V+ L 
Sbjct: 737 RRSFNTAIAAVMELS 751


>gi|125973305|ref|YP_001037215.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003786|ref|ZP_05428774.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417508|ref|ZP_06248528.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|125713530|gb|ABN52022.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992347|gb|EEU02441.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408910|gb|EFB39168.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940462|gb|ADU74496.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 931

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 15/271 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G K     + IM VW D+ +++            ++   WPAD+++ G D     F
Sbjct: 517 KCECGCKEFTKEKDIMDVWFDSGSSHAAVLE------TTEGLTWPADMYLEGSDQHRGWF 570

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    A       P    +     +  +G K+SKSLGN IDP +VI+E G D LR ++ 
Sbjct: 571 QSSLLTAVATKGQAPYKTVLTHGYVVDGEGRKMSKSLGNGIDPEDVIKEYGADILRLWVA 630

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    KD LK+   +++   I N     +  I   D +  + +     E D+ 
Sbjct: 631 SSDY-RTDIRISKDILKQL--SEVYRKIRNTCRYILGNIYDFDPNKDMVSYDEMNELDKW 687

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAST 446
            L   + +++++ +  +    H     + +   V   + Y D  K      + +     +
Sbjct: 688 ALMKLNGLIKKVNDAYEKYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSRADSKERRS 747

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 E++  L  +L   +   + +++  +
Sbjct: 748 AQTAMYEILEALVKMLAPVLAFTSEEVWQFM 778



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 15/159 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K  +     Y N   H+G A   I+ D++ +++ + G +  +  G D HG  I + A
Sbjct: 48  GKPKFVLHDGPPYANGGIHLGTALNKILKDIIIKYYSMKGYETPYVPGWDTHGLPIEQRA 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                               K F  +     R+    L +   +D+   T  K       
Sbjct: 108 IKEFGLKRHEVSPVEFRQACKKFALKYLDVQREAFKRLGVRADWDNPYITLNKEFEAKQI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++ +++ KG IYKG    ++    E    + E+    D
Sbjct: 168 EVFGEMAKKGYIYKGLRPVYWCPECETALAEAEIEYAED 206


>gi|330950950|gb|EGH51210.1| valyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 948

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFAEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|209542815|ref|YP_002275044.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530492|gb|ACI50429.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 871

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 81/237 (34%), Gaps = 7/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 37  DRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRARGHSVLHPMGWDAFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  GV  + +   N    R     L  S+  D  I T    ++   + L+  +   G + 
Sbjct: 97  RERGVHPQAWTLDNIAAMRATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLVE 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            ++  +   +F R++ +   LL   
Sbjct: 157 RRESWVNWDPVDHTVLANEQVVDG----RGWRSGALIEKKQLSQWFLRITKFAPDLLDGL 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
              P +   +    E       G   +  +      G     D   +     D L  
Sbjct: 213 SHLPRWPERVRTMQERWIGRSVG-ARVRFALHAPPEGFDTDLDSVEVFTTRPDTLFG 268



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 19/178 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P+ +IE  G D  R+F++ +    +D  + + G+        A     
Sbjct: 626 EKMSKSKRNTVAPVAIIERFGADTARWFVLSDSPPERDMEWTEAGVAG------AARFLQ 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R+V  + +    +       TE+ +++     R +  + + +++  I+ A+A++  L
Sbjct: 680 RLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHRAIAAVTDALESFAINVAVARLHEL 739

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
            +             L ++        +     E    L +L    VP  A  +  +L
Sbjct: 740 TTA------------LAESERASGDDGMDFARREAALTLCLLAAPMVPHQAEDMLALL 785


>gi|168244036|ref|ZP_02668968.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194449603|ref|YP_002048499.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194407907|gb|ACF68126.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205337066|gb|EDZ23830.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 951

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 23/172 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              +  + ++ ++ ++  IY+G     +  +     +D EV           
Sbjct: 148 GLSNAVKEVFVRLYEEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWH 199


>gi|182420116|ref|ZP_02951350.1| isoleucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669492|ref|ZP_04529472.1| isoleucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376153|gb|EDT73740.1| isoleucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237654936|gb|EEP52496.1| isoleucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 1037

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 138/436 (31%), Gaps = 18/436 (4%)

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            FV +   +  +  +  +  +D   R      H            K   +         L
Sbjct: 358 KFVKKCDESICNYLEENNKLFDK-HRHMHSYPHCWRCDTPLLYYPKDSWFVRMTEMRDKL 416

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFIL 188
            +     +        G++     N + W       +   L  +Q +            L
Sbjct: 417 LENNNKVNWYPDNIRTGRFGKFLENVIDWGISRDRYWGTPLPIWQCECGHRECIGSREEL 476

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
             +   +             +     D G ++      ++  W D+ +       Y    
Sbjct: 477 EAKATTDCKGIELHKPYVDGIKLTCPDCGKEMTRT-NEVIDCWFDSGSMPFAQWHYPFEN 535

Query: 249 DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                K +PA       D     F+ +   +  L    P    +     +  KG K+SKS
Sbjct: 536 KEKFEKNFPAQFISEAVDQTRGWFYTLMAISTCLFDTNPFENCIVLGHVLDKKGLKMSKS 595

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP EV+   G DA R+      A      +  + + +         + N+ S  V
Sbjct: 596 KGNVVDPFEVLGSQGADATRWHFYTASAPWLPTRFSTEDVAETQ-RKFLGTLWNVYSFYV 654

Query: 367 SMILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +  D D   PT  A        D+ I S  + +++ + EN+    I +A   +     
Sbjct: 655 --LYADIDKFDPTKYADFVSDNVMDKWITSKLNTLIKIVEENLDGYKITQAALAIEDFTD 712

Query: 423 EV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           E+ + Y   +  + W    T+    + V      V+  ++ +   FVP +  +I+  L V
Sbjct: 713 ELSNWYVRRNRSRYWSQDLTDDKIGAYV--TLYRVLTTISKIAAPFVPFMTEEIYQNLVV 770

Query: 480 ADENRCFQSLDQRLKP 495
             +    +S+     P
Sbjct: 771 NLDKNAPESVHLCKWP 786



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  KDGEHFTFFDGPPTANGKPHVGHILTRVMKDIIPRYKVMQGYQVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V      +  M++ +   +  DD   T    +
Sbjct: 96  IEKKLGISGKEQIEDYGVEKFITECKDSVFSYVSLWEKMSEQIGYWVDMDDPYVTYHNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     KK+ DKG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKKLWDKGLLYKGHKVMPYCPRCGTALSSHEVAQGYK 199


>gi|190893972|ref|YP_001980514.1| leucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|238692504|sp|B3PS46|SYL_RHIE6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190699251|gb|ACE93336.1| leucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 876

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLTVRW 235



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 110/346 (31%), Gaps = 41/346 (11%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERRNE 195
               V     G+    + + +    +  ++F       +            LP  +    
Sbjct: 486 TWRHVTCPHCGKDARRETDTMDTFVDSSWYFTRFTAPWEAKPTDPEAANRWLPVDQYIGG 545

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R   + G     +P          L           +      + 
Sbjct: 546 IEHAILHLLYSRFFTRAMRETGHVAASEP-------FKGLFTQGMVVHETYSRKAGAGRE 598

Query: 256 W--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W  PAD+ +   D  R   +      ++                   EK+SKS  NV+DP
Sbjct: 599 WVAPADIRIEEIDGKRRALLLATGEEVAIG---------------SIEKMSKSKKNVVDP 643

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++I   G D  R+F++ +    +D  + + G++       A+     + R +S      
Sbjct: 644 DDIIASYGADTARFFVLSDSPPERDVIWSEAGVEG------AHRFTQRLWRLISEAAGVL 697

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             +   P +  E+  +I     + L+ ++ +      ++A+A++  LV+ +        P
Sbjct: 698 STVAAAPASEGEA-LAISQAAHKTLKAVQNDYDKLWFNKAVARIYELVNAL------AAP 750

Query: 434 WELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILF 478
             L K             V +    L  L+    P LA + +  L 
Sbjct: 751 --LTKVAAGEGDIAYRAAVRDAAEILIQLVAPMTPHLAEECWATLG 794


>gi|225874147|ref|YP_002755606.1| valine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225794558|gb|ACO34648.1| valine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 930

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 119/421 (28%), Gaps = 49/421 (11%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             ++  + +   +  +G +           + +      E                    
Sbjct: 329 ERYEARQRVLADLEAQGLLVAVKAHANSVGKCDRCKTVVEPRLSTQWFLKIQPLADKAIA 388

Query: 161 EEEGYFFRLSAYQD---KLLSYYESHPEFILPIERRNEVISFVKSGLKD-----LSLSRK 212
             E  + R +  Q            H   +         I     G             +
Sbjct: 389 AVEQGYIRFTPEQHAKTYFEWMRNIHDWCLSRQLWWGHRIPAWHCGTCQQVTVARETPAQ 448

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G +       ++  W  +     +  G+  +     A F+P    V G DIL F  
Sbjct: 449 CVHCGSEKLTQETDVLDTWFSSGLLPCSVFGWPRHTKDLDA-FYPTQQLVTGFDILFFWV 507

Query: 272 -AIYWPAFLLSANLPLPK-------------KVFSHGFILH-KGEKISKSLGNVIDPIEV 316
             +         ++P+               +V  H  +     +K+SK+ GNV+DPIE+
Sbjct: 508 ARMIMLGCHFMLDVPMADGSERTLKDAVPFREVHIHALVRDADRQKMSKTKGNVVDPIEI 567

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +   G DA+R+ L    + G D  + +   +       AN I N  +R + M ++  +  
Sbjct: 568 VGRFGTDAVRFTLAAMASPGTDIAFSEARTEG--YRAFANKIWN-AARFIFMNVERAEQA 624

Query: 377 IPTPGAFT------------ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-- 422
                A                   I+S       ++   ++    H A   V       
Sbjct: 625 GVNVEAAKVMAAPMLGKDAALEARWIVSRLQATAADVNRALEEYRFHEAANLVYQFFWGE 684

Query: 423 EVDRYFDAQKPWELKKT-------NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             D Y +A K                      L   ++V      +L  F+P L  +++ 
Sbjct: 685 FCDWYLEAVKLRLDFNETAGQSVSKSASQQEALTTLLQVFEAALRMLSPFMPFLTEELWH 744

Query: 476 I 476
            
Sbjct: 745 A 745



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 22/171 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAA 62
             +           H+GH +E   +D+L R+HR+ G   L+  GTD  G      + +  
Sbjct: 52  FTMLLPPPNVTGNLHMGHMFEHAESDILTRWHRMKGKTTLWVPGTDHAGIATQLMVERQL 111

Query: 63  QNAGVTTKVF--------VDQNSRN--------FRDMADVLDISYDDFIRTTEKRHHDTC 106
           +  G T +          V Q   +         R +   +D S + F  T ++      
Sbjct: 112 KTEGKTRQEMGREAFVDRVWQWKEHYGGAILGQMRRLGTSVDWSREYF--TMDENLSAAV 169

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           R  +  + ++G IY+G Y   +  R +   +D EV              PV
Sbjct: 170 REAFVTMHEQGLIYRGAYIVNWCPRCQTAISDLEVVHEEQQGSIWEIRYPV 220


>gi|119196555|ref|XP_001248881.1| hypothetical protein CIMG_02652 [Coccidioides immitis RS]
          Length = 1230

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 10/233 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA  
Sbjct: 353 EKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAIE 412

Query: 65  AGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +  +N    ++       D  +D    T     +   + L+  + +KG  Y+ 
Sbjct: 413 RGINPATWTKENIAKMKEQLKGLGTDFDWDREFMTCSPEFYKHTQRLFLMLHEKGLAYQA 472

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y   D+    +++V               V+  E + +FFR++A+++ LL   +S
Sbjct: 473 KAMVNYDPVDQTVLANEQVDAN---GRSWRSGAVVEKRELKQWFFRITAFKEALLKDLDS 529

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
                L     + ++S  +  L     +R TF            +     D L
Sbjct: 530 -----LASGWPDRILSMQRHWLGKSVGARLTFKIITPKEKLNVQVFTTRADTL 577



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 86/222 (38%), Gaps = 25/222 (11%)

Query: 297  LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
                EK+SKS  N +DP   IE+ G DA R  ++      +   +D+  +   +R  + L
Sbjct: 951  NISFEKMSKSKYNGVDPSTCIEKYGADATRAHILFAAPVSEILEWDETKIVGIQRWFSRL 1010

Query: 355  ANGIGN----LVSRSVSMILKDY----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
               I +    L+   + +  ++     +  +P     ++ + ++L +    +  +   M+
Sbjct: 1011 WKIISDSEKSLIFAELGLSRENIRSADNLALPPLDELSDDEANLLLIAHSTITSVSSCME 1070

Query: 407  N--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 ++  ++ +I   + +               +   + TVLY+    +  L  LL  
Sbjct: 1071 KNPYALNTVISDLIKFTNAI------TSSALPSSPSSPASKTVLYML---VSSLLKLLAP 1121

Query: 465  FVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKT 502
              P  +++ ++ L  +    +EN    S+     P  +L + 
Sbjct: 1122 IAPAFSSECWEQLHTSLLSKNENDQSLSIFSSPWPTPLLTEP 1163


>gi|220932174|ref|YP_002509082.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782501|sp|B8CXR8|SYL_HALOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219993484|gb|ACL70087.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 830

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            +++  Y+     YP+   H+GH     I DV+ARF R++G +VL   G D  G      
Sbjct: 30  TDKDNYYVLEMFPYPSGNLHMGHVRVYSIGDVIARFKRMNGYNVLHPMGWDAFGLPAENA 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           A ++  +  + +   N +N +     L +SY  D  + T ++ ++   +  + K+  KG 
Sbjct: 90  AIKHGNIHPQDWTWDNIKNMKKQMKSLGLSYDWDREVTTAKEDYYKWTQWFFVKMFKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +    E    +++V   A           V+  E E +FF+++ Y ++LL 
Sbjct: 150 AYKKKAAVNWCPGCETVLANEQVVNNA----CERCGTEVEEKELEQWFFKITNYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVISFVKSGL 204
            ++    +   ++           G+
Sbjct: 206 DHKLLQNWPEKVKIMQRNWIGRSEGM 231



 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 106/247 (42%), Gaps = 26/247 (10%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPA-------FLLSANLPLPKKVFSHGFILHKGEKISKS 306
           K++P D ++ G +    H +Y            +  ++       + G +L  G K+SKS
Sbjct: 530 KWFPVDQYIGGIEHAILHLLYARFFTKVIYDMDMIDSVEPFTNWLAQGMVLKDGAKMSKS 589

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DP ++++  G D  R F++      KD  +   G++        N +  LV+ ++
Sbjct: 590 KGNVVDPEDILDRFGADTARLFILFAAPPEKDLEWSDRGVEGAER--FLNRVWRLVADNI 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
             I K+ D       +F ++++ +       ++ + E++ +    + A++ ++ L +   
Sbjct: 648 KEI-KNTDQASLDVNSFNKNEKDLYRNLHVTIKRVTEDIGERLNFNTAISAIMELTNATY 706

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILFVADENR 484
           +Y +  +              V Y  ++ +I ++ ++L  F P +  +++  L   DE+ 
Sbjct: 707 QYLNGVE-------------KVNYTLIKDIIEKMLLILAPFAPHMTEELWSELG-NDESI 752

Query: 485 CFQSLDQ 491
             Q    
Sbjct: 753 HIQKWPG 759


>gi|170695377|ref|ZP_02886523.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139777|gb|EDT07959.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 863

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 30  TDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            E           +   I
Sbjct: 206 LEGLGWPERVKIMQQNWI 223



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 67/191 (35%), Gaps = 21/191 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++    +     + N
Sbjct: 622 EKMSKSKNNGVDPQSLIDQHGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWN 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
               + + +               ++D+ +      VL++   + Q    +  ++  + +
Sbjct: 680 FAQANEAALRAG---GQFDAAQLGDADKLLRREVYSVLKQADFDYQRLQYNTVVSAAMKM 736

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                     +  V  E    +  +L   VP L  +++  L  A
Sbjct: 737 LNALD----------------SAKGALPGVLRETYSVMLRVLYPVVPHLTFQLWQELGYA 780

Query: 481 DENRCFQSLDQ 491
           DE         
Sbjct: 781 DEFGSLLDAPW 791


>gi|145588420|ref|YP_001155017.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083136|sp|A4SVD9|SYL_POLSQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145046826|gb|ABP33453.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 890

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 7/235 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y  + + YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 36  KKKPKYYACSMLPYPSGKLHMGHVRNYTINDVMARQLRMQGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  AIQNKVPPAKWTYDNIAYMKKQMAAMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+F ++AY ++LLS 
Sbjct: 156 YRKTQVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPGYYFNITAYAEQLLSG 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                 +   ++   +       G++           G  I D   Y+     D 
Sbjct: 212 L-DGLGWPERVKTMQQNWIGKSRGVRFAFKHEIADAHGNFIQDGLLYVFTTRADT 265



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 74/181 (40%), Gaps = 16/181 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G+           +  
Sbjct: 644 EKMSKSKNNGVDPQALIDQYGADTARLFVMFAAPPEQQLEWSGAGVDGAS-----RFLRR 698

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +   S S      D     P    ++++ +      +L++   + Q +  +  ++  + +
Sbjct: 699 VWMYSSSQASAIKDAQDALPSTLNDAEKELRREVHAILKQANFDYQRRQYNTVVSAAMKM 758

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +       +P +L + +P  AS    V  E +  L  +L   VP L + ++  +  +
Sbjct: 759 LNVL-------EPIKLGQDSPISAS----VLRECLSILLRVLYPVVPHLTHVLWKDMGYS 807

Query: 481 D 481
           +
Sbjct: 808 E 808


>gi|71901312|ref|ZP_00683409.1| Valyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|71728932|gb|EAO31066.1| Valyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
          Length = 994

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 69/407 (16%), Positives = 128/407 (31%), Gaps = 92/407 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+     + L   E      +P    N         ++D  +SR+   W
Sbjct: 407 IEPYLTAQWFVRMETLAARGLELVERGAVRFVPPNWINT-YRHWMENIQDWCISRQ-LWW 464

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ D
Sbjct: 465 GHRIPAWFDTQGCVYVGRSEAEVRAKHALGPEVTLTQDNDVLETWFSSQLWPFSTLGWPD 524

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       + N+P      +      +G+
Sbjct: 525 PMAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDHFTGNVPFQDVYITGLIRDAQGQ 584

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 585 KMSKSKGNVLDPLDIIDGITLDDLVAKRTTGLMQPKLAEKIAKATRKEFPDGIAPHGADA 644

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------ 378
           LR+ +      G+D  +D    +   N    N + N     +     D            
Sbjct: 645 LRFTIAALATHGRDIKFDLGRAEGYKN--FCNKLWNATRFVLMNTAGDTAHSPAQHQAGQ 702

Query: 379 -------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
                  TP   T++++ ILS  + V  E                +         D + +
Sbjct: 703 DGQDVPRTPQPRTDAEQWILSQLAAVTAEAHAQFAAYRFDLLAQALYEFAWNEFCDWFVE 762

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             KP  L   +   A++  +  + V+  L  LL   +P +  +++  
Sbjct: 763 LAKP-ALNGDDTQAAASTRHTLLYVLETLLRLLHPLIPFITEELWCQ 808



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 20/173 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  QPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMCGDDTLWQVGTDHAGIATEMVVSR 93

Query: 65  AGV------------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             +                      +  Q+          L +S D      T + +   
Sbjct: 94  NVMLEGRGETRDSLGRDGFINKVWEWKQQSGDTIERQMRRLGVSADWSRSTFTMDPQPSA 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + +  ++G IY+G     +    +   +D EV    +     +   P+
Sbjct: 154 AVTEAFVRWYEEGLIYRGQRLVNWDPVLKTAISDLEVENVQEEGMLWSIRYPL 206


>gi|320329798|gb|EFW85786.1| valyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 948

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHSIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVDKRTSGLMQPHLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|317498037|ref|ZP_07956341.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894713|gb|EFV16891.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 1051

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 61/464 (13%), Positives = 142/464 (30%), Gaps = 24/464 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 ++ F    DE G    +           FV +         D   + YD     
Sbjct: 342 KVGRKYEMPFVQLVDERGNMSEETPFAGL-----FVKKADPEVLKDLDARGLLYD----- 391

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGAD----GQYYNA 152
              +   +    W+  +      +  +    +  +D+   N++ V         G++ + 
Sbjct: 392 -APKFEHSYPHCWRCDTPLIYYARESWFIKMTDVKDQLIANNNTVNWVPKSIGKGRFGDW 450

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N              ++
Sbjct: 451 LENVQDWGISRNRYWGTPLNIWECECGHQHSIGSIEELKSMSDNCPDDIELHRPYIDQVT 510

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G  +    + ++  W D+ +       Y           +PA+      D    
Sbjct: 511 IKCPHCGKPMHR-VEEVIDCWFDSGSMPFAQWHYPFENKEIFEDNFPANFISEAVDQTRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + LL    P    V         G+K+SKS GN +DP + +EE G DA+R++
Sbjct: 570 WFYSLMAISTLLFNKAPYKNVVVLGHVQDENGQKMSKSKGNAVDPFDALEEHGADAIRWY 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
                A      +    + +     +          ++   +  +D           +  
Sbjct: 630 FYTNSAPWLPNRFHAKAVTEGQRKFMGTLWNTYAFYTLYAEIDQFDPTKHALEYDKLSVM 689

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++ + +N+ N  I  A   +   V ++ + Y    +     K       
Sbjct: 690 DKWLLSKMNTMVKSVDDNLGNYRIPEAARALQEFVDDMSNWYVRRCRDRFWAKGMEQDKV 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  +       +P +  +I+  +  + +    +S+
Sbjct: 750 NAYMTLYTALVTVCKAAAPMIPFMTEEIYQNIVRSVDASAKESI 793



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGH    +I D++ R+  + G  ++   G D HG  +   
Sbjct: 36  KDDPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHKIIRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +D +      ++   T +   
Sbjct: 96  VEKMLGLDGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSDTVGFWADMENPYITYDNNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     + ++E
Sbjct: 156 IESVWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFKLVDE 215

Query: 163 EGYFFRLS 170
           + YF   +
Sbjct: 216 DAYFLAWT 223


>gi|58582952|ref|YP_201968.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|81311775|sp|Q5GXI8|SYL_XANOR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58427546|gb|AAW76583.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 880

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 73/513 (14%), Positives = 151/513 (29%), Gaps = 100/513 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQRWDATEWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDFGGAFEALAERFERKGQGQRRVNYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G                      +LP                    +    D G  
Sbjct: 455 CPKCGAVPVPED-----------QLPVVLPENVEFACTGSPIKTDPTWRQT-TCPDCGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+         +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNAREMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                     +
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIADTFYRDADNGGKDWINPADVEIQRDERGRVT 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GAVLIADGQPVHIGGTEKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEI 401
           G+         +G+   + R  + + K       +     A +   ++I       + ++
Sbjct: 681 GV---------DGMARFMRRLWAQVHKHVGEGAAVALDVAALSAEQKAIRRKTHETIGKV 731

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            ++   +   + A+A V+ L + + ++ DA        ++  RA     V  E +  + +
Sbjct: 732 SDDYGRRHSFNTAIAAVMELSNALAKFDDA--------SDQGRA-----VRQEALEAMVL 778

Query: 461 LLQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           LL    P  ++ ++ +L   +   EN  F   D
Sbjct: 779 LLNPITPHASHALWQVLGRGETLLENVAFPQAD 811


>gi|226943041|ref|YP_002798114.1| leucyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511540|sp|C1DMV9|SYL_AZOVD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226717968|gb|ACO77139.1| Leucyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 870

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGRNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADV--LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +       L I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNRVAPAKWTYENIAYMKSQLKSLGLGIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   Y+FR++AY ++LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYFRITAYAEELLQSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S P +   ++           G
Sbjct: 207 DSLPGWPEQVKTMQRNWIGKSYG 229



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 74/182 (40%), Gaps = 26/182 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F++          +   G++         G   
Sbjct: 628 EKMSKSKNNGVDPQAMIDAYGADTCRLFMMFAAPPELSLEWSDAGVE---------GASR 678

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P        +++ + I       +++  +++ Q+   + A+AQ
Sbjct: 679 FLRRVWRLAHAHVGAGLPGTLDKARLSDAQKEIRRAIHLAIRQASQDVGQHHKFNTAIAQ 738

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +      + P        DRA     +  E +  +A+LL    P + + +++ 
Sbjct: 739 VMTLMNVL-----EKAP---AADEQDRA-----LLQEGLETVALLLAPITPHICHALWEA 785

Query: 477 LF 478
           L 
Sbjct: 786 LG 787


>gi|84502708|ref|ZP_01000827.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389103|gb|EAQ01901.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 1065

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 12/265 (4%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I        ++  W  +    + T G+ D       K++P  + V G+DIL F    +  
Sbjct: 625 IYPVWREADVLDTWFSSGLWPIGTLGWPDETP-EMKKYFPTSVLVTGQDILFFWVARMMM 683

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +    P             KG+K+SK++GNVIDP+E+I+E G DALR+        
Sbjct: 684 MQLAVVGEKPFSDVYLHGLVRDAKGKKMSKTVGNVIDPLEIIDEYGADALRFANAAMATL 743

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSV 393
           G     D   +      +    + N  +R   M  + +        P A    +  I+  
Sbjct: 744 GGVLKLDAQRIAG--YRNFGTKLWN-ATRFAEMNGVYEAGAPSPEVPEAVATVNRWIVGE 800

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +RV + +   +       A + +   V     D Y +  KP  L   N         V 
Sbjct: 801 TARVRETVDAALAAYRFDDAASALYRFVWGKVCDWYVEFSKP--LLAENAAERGETQRVM 858

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
             V+ Q  I+L   +P +  +++  
Sbjct: 859 GWVLDQCMIMLHPMMPFITEELWSA 883



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 61/198 (30%), Gaps = 31/198 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+ R+ G D L+  GTD  G       + 
Sbjct: 36  ETYSIMIPPPNVTGSLHVGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQLVTER 95

Query: 65  AGVTTKV----------FVDQNSRNF-----------RDMADVLDISYDDFIR------- 96
                            F+++  +             + +    D S + F         
Sbjct: 96  EMAANHEPSRVEMGREAFIERVWQQKVKTRGTIIGQLKRLGASADWSREAFTMGGAAGDP 155

Query: 97  ---TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
              T     HD    ++  + +KG IY+G     +    E   +D EV       +    
Sbjct: 156 DRETVTANFHDAVIKVFVDMYEKGLIYRGKRLVNWDPHFETAISDLEVENVETAGHMWHF 215

Query: 154 HNPVQWMEEEGYFFRLSA 171
             P+   E   Y  +   
Sbjct: 216 KYPLAGGETYTYVEKDED 233


>gi|298485814|ref|ZP_07003892.1| Valyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159638|gb|EFI00681.1| Valyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 948

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDETEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGISRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|223039908|ref|ZP_03610191.1| valyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878776|gb|EEF13874.1| valyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 982

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 132/370 (35%), Gaps = 59/370 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + + F      D  ++          P    N   +     L+D  
Sbjct: 452 YCYRCKNVVEPYISKQW-FVKKQIADDAIAKVGEGLAKFYPAHWIN-SFNAWMRELRDWC 509

Query: 209 LSRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYL 239
           +SR+   WG +I                               DP  ++  W  +     
Sbjct: 510 ISRQ-LWWGHQIPVFYCGECGHEWADEGEPTQCPKCKSANFHQDPD-VLDTWFSSGLWPF 567

Query: 240 TTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
           +T G+ +          DG  A+F+P +L + G DIL F    + +        LP    
Sbjct: 568 STLGWGNGEELKNEKWFDGDLAEFYPNNLLITGFDILFFWVARMMFQGENALGKLPFDDI 627

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                    +G K+SKSLGNVIDP+  I+E   D LR+ L      G+D     + +K  
Sbjct: 628 YLHALVKDEQGRKMSKSLGNVIDPLVSIDEYSADILRFTLALLAVQGRDIKLSDEKMK-- 685

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQN 407
               L     N +  +   +L +         A   T+  + ILS  +  ++E REN+  
Sbjct: 686 ----LVRNFTNKLYNASKYLLLNESKFANLSDAKIETKLGKYILSRFNECVREARENIDA 741

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A   +   +       D    W ++ +  D+  +V  +   + ++   LL  F+P
Sbjct: 742 YRFNDAANAIYKFLW------DEFCDWGIELSKADK-GSVRELGA-IFKEAMRLLSPFMP 793

Query: 468 KLANKIFDIL 477
            ++  +F  L
Sbjct: 794 FISEFLFHEL 803



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K  I           HIGHA    + D++ R+ R+DG   L+  G D  G      
Sbjct: 34  KDGRKFCIMMPPPNVTGSLHIGHALTFTLQDIITRYKRMDGYKTLWQPGLDHAGIATQNV 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++          L IS  +     T ++   
Sbjct: 94  VEKQLLAQGIKKEELGREKFVEKVWEWKEKSGGMIVHQMRKLGISPAWSRQRFTMDEGLR 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
              +  +  + +KG I +  Y   +   D A  + +  +K   G+ Y+ ++
Sbjct: 154 IAVKKAFLNLYEKGLIVRENYMINWCTHDGALSDIEVEHKENKGKLYHLRY 204


>gi|89075938|ref|ZP_01162313.1| valyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048379|gb|EAR53957.1| valyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 953

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 82/450 (18%), Positives = 148/450 (32%), Gaps = 91/450 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEIKDHDLTIPYGDRGGVVIEPMLTDQWYVRAAPLAKPAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV------------------- 230
             N   ++++  ++D  +SR+   WG  I    D    +YV                   
Sbjct: 409 YENMYFAWMRD-IQDWCISRQ-LWWGHRIPAWYDNDGNVYVGRNEAEVREKHNLAPVVVL 466

Query: 231 ---------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                    W  +      T G+ +N    +    P+D+ V G DI+ F         + 
Sbjct: 467 NQDNDVLDTWFSSALWTFGTQGWPENTADLQTFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNVIDPI++I+               
Sbjct: 526 FCKDEDGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVIDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAAKIEKATRKTFENGIEPYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            + N  SR V M  +D D           + +D+ I S      +E   ++ N  +  A 
Sbjct: 644 KLWN-ASRYVLMNTEDQDCGFAAGSELEYSLADKWIESQFQLAAKEFNTHIDNFRLDMAA 702

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  KP  L K    +     +  + V+ +   L    +P +   
Sbjct: 703 GVLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRATRHTLITVLEKTLRLAHPVLPYITES 761

Query: 473 IFDIL-----FVADENRCFQSLDQRLKPGF 497
           I+  +      V  E    Q+L Q  +  F
Sbjct: 762 IWQSVKPLVDGVEGETIMTQALPQFDEAQF 791



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++  +  +Y+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYQEDLLYRGKRLVNWDPKLHTAISDLEVENKDKKGHMWHFRYPL 204


>gi|307730979|ref|YP_003908203.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585514|gb|ADN58912.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 863

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 30  TDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMANNVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V +G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIEG----RGWRSGALVEKREIPMYYMRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            E           +   I
Sbjct: 206 LEGLGWPERVKIMQQNWI 223



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 67/195 (34%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++         G   
Sbjct: 622 EKMSKSKNNGVDPQSLIDQHGADTARLFVMFAAPPEQQLEWSGSGVE---------GASR 672

Query: 361 LVSRSVSMILKDYDGM----IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    +   +            ++D+ +      VL++   + Q    +  ++ 
Sbjct: 673 FLRRVWSFAHANEAALRTGGQFDAAQLGDADKLLRREIYSVLKQADFDYQRLQYNTVVSA 732

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                     +  V  E    +  +L   VP L  +++  
Sbjct: 733 GMKMLNALDG----------------AKGALPAVLRETYGVMLRVLYPVVPHLTFQLWQE 776

Query: 477 LFVADENRCFQSLDQ 491
           L  ADE         
Sbjct: 777 LGYADEFGSLLDAPW 791


>gi|154245393|ref|YP_001416351.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159478|gb|ABS66694.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 894

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 8/238 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K ++     YP+ + HIGH    ++ DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 49  RPKFFVMEMFPYPSGRIHIGHGRNYVMGDVLARYKRMQGFNVLHPMGWDAFGLPAENAAI 108

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K +  +N  + R+   +L +S D    I T +  ++   + ++    D G  Y+
Sbjct: 109 ERGIHPKSWTYENIASMREQLQLLGLSLDWNREIATCDPSYYAEQQRIFLDFLDNGLAYR 168

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  +   +F R++ +  +LL   +
Sbjct: 169 KESEVNWDPVDNTVLANEQVIDG----RGWRSGAIVERRKLSQWFLRITDFAQELLDALD 224

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL-SLSRKTFDWGI-KIPDDPQYIMYVWIDALTN 237
           +   +   +            G++ L   +R +   G          +     D L  
Sbjct: 225 TLDRWPEKVRLMQRNWIGRSEGMEVLFEFTRASVSAGTLPAAAKAVKVYTTRPDTLFG 282



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 115/383 (30%), Gaps = 68/383 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFV 200
            G   Q Y     PV   +  G            L    +      P++R      +   
Sbjct: 455 WGISRQRYWGCPIPVIHCDACGPVGVPREQLPVALPDDVTFDRPGNPLDRAKAWRDVPCP 514

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K G      +            D              Y +    +     + A + P D 
Sbjct: 515 KCGKPARRET------------DTMDTFVDSSWYFLRYASDNPQVPLDKDAVAHWLPVDQ 562

Query: 261 HVIGKDILRFHAIYWPAF-------------------------------LLSANLPLPKK 289
           ++ G +    H +Y   F                                 +     P++
Sbjct: 563 YIGGIEHAILHLLYSRFFTRALKKCGRVDLDEPFAGLFTQGMIVHETYKDTAGKWLFPEE 622

Query: 290 VF------------SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           V                  +   EK+SKS  NV+ P  V +  GVD  R+F++ +    +
Sbjct: 623 VKLLGNGKAVKIADGSDVTVSPPEKMSKSKRNVVAPEVVADTYGVDCARWFMLSDTPPER 682

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  + + G++          +  LV+ +V +         P P AF+ +   +      +
Sbjct: 683 DSEWTQGGIEGAWR--FVQRVWRLVNEAVEL---GASAGSPRPDAFSPTALGLRRAAHGL 737

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +  + E+++    + A+A V       + +  A      +K  P   +   +   E    
Sbjct: 738 VATVAEDIERLRFNVAVAHVHEF---ANAFGSAIAVARAEKAVPADLA---FALREAAEM 791

Query: 458 LAILLQAFVPKLANKIFDILFVA 480
           LA ++   VP LA + +  L  +
Sbjct: 792 LASVVAPMVPHLAEECWVALGGS 814


>gi|325294118|ref|YP_004279982.1| Leucyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061971|gb|ADY65662.1| Leucyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 876

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 6/209 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN    R     + +S D      T +  ++   + L+     KG +Y+
Sbjct: 93  QNKVHPKDWTYQNIATMRGQLKSMGLSLDWTREFATCDVEYYHRQQALFVDFMKKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR++ +   LL   +
Sbjct: 153 KQSKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFRITDFSQDLLDELD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +  ++   +    +       GL     +
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLSLRWQT 237



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 124/347 (35%), Gaps = 43/347 (12%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               V     G     + + +  +++   Y+ R +A  +   +  ++   ++   +    
Sbjct: 486 TWRHVACPQCGHDARRETDTMDTFVDSSWYYTRFTAPWEDEPTDPKAANHWLPVDQYIGG 545

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R   + G     +P          L           +      + 
Sbjct: 546 IEHAILHLLYSRFFTRAMRETGHVGVKEP-------FKGLFTQGMVVHETYSHGEGLTRE 598

Query: 256 W--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           W  PADL +   D  R       AFLLS+   +          +   EK+SKS  NV+DP
Sbjct: 599 WVAPADLRIEETDGAR------RAFLLSSGAEVK---------IGSIEKMSKSKKNVVDP 643

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++I   G D  R+F++ +    +D  + + G++        N     V R +  +  + 
Sbjct: 644 DDIIASYGADTARFFVLSDSPPDRDVIWSEAGVEGS------NRFVQRVWRIIGEVATEL 697

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             + P P +  E   ++     + L+ ++E++     ++A+A++  LV+ +        P
Sbjct: 698 KSVTPKPASEGEG-LAVSKAAHKTLKAVQEDLDKLAFNKAIARIYELVNAL------AAP 750

Query: 434 W--ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                    PD         VE+   L  ++    P LA + +  L 
Sbjct: 751 LADVAAGGKPDDVKAAARDAVEI---LIRIIAPMTPHLAEECWSALG 794


>gi|213609928|ref|ZP_03369754.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 555

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229


>gi|153008429|ref|YP_001369644.1| leucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166231624|sp|A6WXW1|SYL_OCHA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151560317|gb|ABS13815.1| leucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 877

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    R     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 92  MQNKVHPKEWTYQNIATMRSQLKSMGLSLDWAREFATCDVEYYHRQQMLFIDLFEKGLVT 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 152 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 208 DTLDQWPEKVRLMQRNWIGKSEGLQVR 234



 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 65/419 (15%), Positives = 129/419 (30%), Gaps = 84/419 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 434 WGISRQRYWGCPIPMIHCESCGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +     + P D
Sbjct: 493 PKCGADARRET------------DTMDTFVDSSWYYARFTAPWENEPTDRKVADHWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGIDEPFKGLFTQGMVVHETYKANGQWVAPAD 600

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 601 IRIEETDGKRSAALLSTGEPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFMLSDSP 660

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--S 392
             +D  + + G         A G    V R   ++ +  + +           E+++   
Sbjct: 661 PERDVIWTEAG---------AEGAHRFVQRVWRLVAEAAEHLKDVAPKTGTQGEALVVSK 711

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              + ++ + ++++    +R +A++  LV+                 + +  S V  VT 
Sbjct: 712 AAHKAVKAVGDDIEKLAFNRGVARLYELVNTAAASLQQVAS---GNADDELKSAVRDVT- 767

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFV---ADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
               +L ++L   +P LA +   +L       E    +S      P  ++    + + P
Sbjct: 768 ---EKLILMLAPMMPHLAEQCLAVLGGKIAGRETLVARSAWPEFDPALVVEN--EIVMP 821


>gi|291560024|emb|CBL38824.1| isoleucyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 1051

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 24/464 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 ++ F    DE G    +           FV +         +   + YD     
Sbjct: 342 KVGRKYEMPFVQLVDERGNMSEETPFAGL-----FVKKADPEVLKDLESRGLLYD----- 391

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGAD----GQYYNA 152
              +   +    W+  +      +  +    +  +D+   N++ V         G++ + 
Sbjct: 392 -APKFEHSYPHCWRCDTPLIYYARESWFIKMTDVKDQLIANNNTVNWVPKSIGKGRFGDW 450

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N              ++
Sbjct: 451 LENVQDWGISRNRYWGTPLNIWECECGHQHSIGSIEELKSMSDNCPDDIELHRPYIDQVT 510

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G  +    + ++  W D+ +       Y           +PA+      D    
Sbjct: 511 IKCPHCGKPMHR-VEEVIDCWFDSGSMPFAQWHYPFENKEIFEDNFPANFISEAVDQTRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + LL    P    V         G+K+SKS GN +DP + +EE G DA+R++
Sbjct: 570 WFYSLMAISTLLFNKAPYKNVVVLGHVQDENGQKMSKSKGNAVDPFDALEEHGADAIRWY 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTES 386
                A      +    + +     +          ++   +  +D    T      +  
Sbjct: 630 FYTNSAPWLPNRFHAKAVTEGQRKFMGTLWNTYAFYTLYAEIDQFDPTKHTLEYDKLSVM 689

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++ + +N+ N  I  A   +   V ++ + Y    +     K       
Sbjct: 690 DKWLLSKMNTMVKSVDDNLGNYRIPEAARALQEFVDDMSNWYVRRCRDRFWAKGMEQDKV 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  +       +P +  +I+  +  + +    +S+
Sbjct: 750 NAYMTLYTALVTVCKAAAPMIPFMTEEIYQNIVRSVDASAKESI 793



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGH    +I D++ R+  + G  ++   G D HG  +   
Sbjct: 36  KDDPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHKIIRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +D +      ++   T +   
Sbjct: 96  VEKMLGLDGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSDTVGFWADMENPYITYDNNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     + ++E
Sbjct: 156 IESVWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFKLVDE 215

Query: 163 EGYFFRLS 170
           + YF   +
Sbjct: 216 DAYFLAWT 223


>gi|261211065|ref|ZP_05925354.1| valyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839566|gb|EEX66177.1| valyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 953

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 135/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEAEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|209517543|ref|ZP_03266383.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502076|gb|EEA02092.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 863

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 30  SDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMANNVPPAQWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++    +     + N
Sbjct: 622 EKMSKSKNNGVDPQMLIDQHGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWN 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
               + S +               E+D+++      VL++   + Q    +  ++  + +
Sbjct: 680 FGYSNESALRAG---GQFDAAQAGEADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 736

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                  A T   V  E    +  +L   VP L  +++  L  A
Sbjct: 737 LNALD--------------GAKGAQTA--VLRETYGVMLRVLYPVVPHLTFQLWQELGYA 780

Query: 481 DE 482
           DE
Sbjct: 781 DE 782


>gi|154494136|ref|ZP_02033456.1| hypothetical protein PARMER_03481 [Parabacteroides merdae ATCC
           43184]
 gi|154085998|gb|EDN85043.1| hypothetical protein PARMER_03481 [Parabacteroides merdae ATCC
           43184]
          Length = 875

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 122/373 (32%), Gaps = 54/373 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L           P + +N         +KD  +SR+   
Sbjct: 351 PIEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPPKFKNT-YRHWMENIKDWCISRQ-LW 408

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       + ++  W  +    +
Sbjct: 409 WGHRIPAYFLPEGGYVVAETAEKALEIAKEKTGNASLTMADLRQDEDVLDTWFSSWLWPI 468

Query: 240 T-TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +   G  D  +     ++P    V G DI+ F    +    +     +P     F+    
Sbjct: 469 SLFNGINDPDNQEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKMPFKNVYFTGIVR 528

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++IE+ G D +R  L+     G D  +D    ++  N     
Sbjct: 529 DKLGRKMSKSLGNSPDPLQLIEQYGADGVRMGLMMAAPAGNDIPFDDALCEQGRN----- 583

Query: 357 GIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
              N +  +  +I     D  I  P A   + +       + + E+ +      +  A+ 
Sbjct: 584 -FNNKIWNAFRLIKGWTVDSTIEQPEAAATAVKWFKMQLDKTIAEMDDLFGKYRLSEAMM 642

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L  +     Y +  KP   +  +     +    T+     L  LL  F+P +  ++
Sbjct: 643 AVYKLFWDEFSSWYLEMVKPGYQQPVD----KSTYLSTLGFFDALLRLLHPFMPFITEEL 698

Query: 474 FDILFVADENRCF 486
           +  L    E    
Sbjct: 699 WQALEPRKEGESL 711



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILIRRARMQGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNRLAQQGIKKTDLTREDFLKHAWEWKEEHGGIILKQLRKLGASCDWDRTAFTMDELRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAIVATTRPETIMGDTAMCINPNDPKNTW 240


>gi|113969474|ref|YP_733267.1| valyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113884158|gb|ABI38210.1| valyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 958

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDANGKVYVGRNEAEVRAKHNIDDSIALRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NVEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPLVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLESLVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +  D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEGQDCGPNSPD 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M N     A   +         D Y +  KP
Sbjct: 668 YQGGEMELSLADRWIIGLFNQTVKTYDDHMANYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  N  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGNEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 21/175 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLE 95

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
                                +  Q+          +   + +D    T ++      + 
Sbjct: 96  AEEGKSRHDLGRDAFMEKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQE 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ ++ +   IY+G     +  +     +D EV       +      P+   E  
Sbjct: 156 VFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKEKQGHMWHLRYPLADGELT 210


>gi|257487395|ref|ZP_05641436.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 948

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++    +  +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKSLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEVALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFAEGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|226325574|ref|ZP_03801092.1| hypothetical protein COPCOM_03379 [Coprococcus comes ATCC 27758]
 gi|225206057|gb|EEG88411.1| hypothetical protein COPCOM_03379 [Coprococcus comes ATCC 27758]
          Length = 1053

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/464 (12%), Positives = 139/464 (29%), Gaps = 24/464 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    DE G                FV +         D   + +D     
Sbjct: 342 KVGRKYDLPFVQLVDEKGDMGETTPFAGL-----FVKKADPEVLKDLDDRGLLFD----- 391

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
              +   +    W+  +      +  +    +   +    ++            G++ + 
Sbjct: 392 -APKFEHSYPHCWRCDTPLIYYARESWFIKMTEVKDDLIANNNTINWIPESIGKGRFGDW 450

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N              ++
Sbjct: 451 LENVQDWGISRNRYWGTPLNIWECECGCQHSIGSIEELKSMSDNCPDDIELHRPYIDDVT 510

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G ++   P+ ++  W D+ +       Y         + +PA       D    
Sbjct: 511 IKCPKCGKQMHRVPE-VIDCWFDSGSMPFAQHHYPFENKEVFEQQFPAQFISEAVDQTRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L+    P    +         G+K+SKS GN +DP + +E  G DA+R++
Sbjct: 570 WFYSLLAISTLIFNKAPYQNVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWY 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
                A      +    + +     +           +   + D+D           +  
Sbjct: 630 FYVNSAPWLPNRFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDDFDATKYALEYDKLSVM 689

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++ +  ++ N  I  A   +   V ++ + Y    +     K       
Sbjct: 690 DKWLLSKLNTLIKTVDNHLANYQIPEAARALQDFVDDMSNWYVRRSRERFWAKGMEQDKI 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  ++ +    +P +  +I+  L  + +    +S+
Sbjct: 750 NAYMTLYTALVTVSKVAAPMIPFMTEEIYQNLVRSVDESAPESI 793



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 63/188 (33%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 38  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      ++   T +   
Sbjct: 98  VEKLLGLDGKDQIEKYGVEPFINKCKESVWKYKGMWEDFSSTVGFWADMENPYVTYDNNF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     KKI DKG +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 158 IESEWWALKKIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFKVKDE 217

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 218 DAYILAWT 225


>gi|117919580|ref|YP_868772.1| valyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|117611912|gb|ABK47366.1| valyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 958

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDANGKVYVGRNEAEVRAKHNIDDAIALRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NVEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHLIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +  D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEGQDCGPNSPD 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M N     A   +         D Y +  KP
Sbjct: 668 YQGGEMELSLADRWIIGLFNQTVKTYDDHMTNYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  N  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGNEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 21/175 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLE 95

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
                                +  Q+          +   + +D    T ++      + 
Sbjct: 96  AEEGKSRHDLGRDAFMEKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQE 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ ++ +   IY+G     +  +     +D EV       +      P+   E  
Sbjct: 156 VFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKEKQGHMWHLRYPLADGELT 210


>gi|326484075|gb|EGE08085.1| leucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 975

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     A
Sbjct: 73  SSKEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENA 132

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  QN  N ++    L I   +D  + T     +   + L+  + +KG  
Sbjct: 133 AIERGIHPEGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLA 192

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  E + +FFR++A+++ LL  
Sbjct: 193 YQAEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKD 249

Query: 180 YE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA 234
            +    S P+ IL ++R    +   +  L   +LS       I++       ++ V   A
Sbjct: 250 LDSLSGSWPDRILTMQRH--WLGKSRGALVPFTLSTPGETLDIEVFTTRPDTLHGVQYIA 307

Query: 235 LTNYLTTTGYLDNPDGSKAKF 255
           L+        +        +F
Sbjct: 308 LSTSHPVVKKMAANTSELEEF 328



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KR 349
           +        EK+SKS  N +DP   IE  G DA R  ++      +   +D+  +   +R
Sbjct: 664 TQIPANISFEKMSKSKYNGVDPNTCIENYGADATRAHVLFSAPVSEVLEWDETKIVGIQR 723

Query: 350 VNADLANGIG---NLVSR-----SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             + +   +    N + R     +   +    D  +P  G  +E++ ++L + +  +  +
Sbjct: 724 WFSRIWKAVEDTGNSLKRANFASAPGALSSLNDMALPPLGKLSETESNLLLMTNNTISSV 783

Query: 402 RENMQNQLIHRALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQL 458
              ++       L  VI  L+   +       P E  K +P   S T LY T+ + +  L
Sbjct: 784 SYCLEKNQYG--LNTVISDLIKLTNTIAAVPLPGESSKPSPSAQSITQLYTTLYISLNSL 841

Query: 459 AILLQAFVPKLANKIFDIL 477
             +L    P  A++ +++L
Sbjct: 842 LRMLAPIAPAFASECWEVL 860


>gi|239905094|ref|YP_002951833.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794958|dbj|BAH73947.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 837

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 6/182 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     I DV+ARF R++G +VL   G D  G     AA
Sbjct: 30  SKPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARFKRMEGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  + R     L  SYD    I T    ++   +  + K  +KG +Y
Sbjct: 90  IKHKLHPAAWTISNIDSMRTQLQRLGYSYDWRREIATCHPGYYVHEQRFFLKFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G            V   + E +F R++ Y ++LL+  
Sbjct: 150 RKHSPQNWCETCGTVLANEQVIDG----CCWRCDQAVVQKDLEQWFLRITDYAEELLADL 205

Query: 181 ES 182
           + 
Sbjct: 206 DQ 207



 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 89/241 (36%), Gaps = 26/241 (10%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
             A + P D ++ G +    H +Y   F         +  + P    + + G ++  G K
Sbjct: 527 ELAYWLPVDQYIGGIEHAILHLLYSRFFVKALRDLGYVGFDEPFA-NLLTQGMVIKDGSK 585

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP  +I + G D +R F++      KD  +   G++    +   + +  LV
Sbjct: 586 MSKSKGNVVDPDLMIGKYGADTVRVFILFAAPPEKDLEWSDTGIEGA--SRFLSRLWRLV 643

Query: 363 SRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQV 417
           +  +S +L       P               +         +   ++ +    + A+A  
Sbjct: 644 TEELSGVLTPMPACAPAEVLNLDGLPPLFAELRRREHAAAAKAGADIRERFQFNTAIAVA 703

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+ +    +A +        P  A  V       +  L  +L    P +  +++  +
Sbjct: 704 MELVNFLYANVEALR------AEPKGAKAVSS----AVATLLTVLSPIAPHICEELWQTV 753

Query: 478 F 478
            
Sbjct: 754 G 754


>gi|256823042|ref|YP_003147005.1| valyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796581|gb|ACV27237.1| valyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 923

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 121/391 (30%), Gaps = 76/391 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++ +++   +  L   +      +P    N    +++  ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVKIAPLAEPALKAVKDGDIKFVPDNWSNTYYHWME-NIQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQYIMYV---------------------------WIDALTNYLTTTGYLDN 247
           G  I    D    +YV                           W  +      T G+   
Sbjct: 406 GHQIPAWYDKDDNVYVGRSEEEVRQKHNLGDIELRRDEDVLDTWFSSALWPFATLGWPQE 465

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
               K    P  + V G DI+ F    +       +  +P  +   +       G+K+SK
Sbjct: 466 TPELKTFL-PTSVLVTGFDIIFFWVARMIMMGLKFTGEVPFKEIYITGLIRDEHGQKMSK 524

Query: 306 SLGNVI-----------------------DPIEVIE--------------EVGVDALRYF 328
           S GNV+                       +P +  +                G DA+R+ 
Sbjct: 525 SKGNVLDPIDIIDGIDIDSLVAKRTTGMMNPKDAEKVSKRTRKQFPEGIAPYGTDAMRFT 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                +  +D  +D + ++     +  N I N     +    +   G+       + +D 
Sbjct: 585 FCAMASTSRDINFDLNRVEG--YRNFCNKIWNAARYVLMNTEEQDTGVNGGEITLSVADR 642

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT-NPDRAS 445
            I S   + + E  + + N     A   +         D Y +  KP       +     
Sbjct: 643 WIQSELQKTITEYEKAIVNYRFDLASNALYEFTWNTYCDWYLELSKPILYGDEYSEAEKR 702

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              +  V V+  L  LL  F+P +  +I+  
Sbjct: 703 GTRHTLVSVLESLMRLLHPFMPFITEEIWQR 733



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
              I  PN     H+GHA++  I D L R+HR+ G + L+  G+D  G       +    
Sbjct: 34  CIMIPPPNVTGSLHMGHAFQHTIMDALTRYHRMKGDNTLWQPGSDHAGIATQMVVERLLD 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R + D  D S + F  T +    +   
Sbjct: 94  KEGKSRHDLGREAFIDKVWEWKEESGGTISRQMRRLGDSCDWSREAF--TMDDDLSNAVL 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ ++G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EVFVRLHEEGLIYRGQRLVNWDPKLLTAVSDLEVESHEEDGHLWHLKYPL 201


>gi|261349806|ref|ZP_05975223.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860591|gb|EFC92889.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 1090

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 82/467 (17%), Positives = 156/467 (33%), Gaps = 24/467 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F      D+      DE G     A + AG     F    +           + Y +   
Sbjct: 366 FEVGKAYDLPIFCPVDESGNFTDDAGKYAG----EFCKAANDGIIADLQESGLMYRNETI 421

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                    C+     ++ K    K        + DE    +        G++ +   N 
Sbjct: 422 EHRYGVCWRCKTPIIYLATKQWFLKVT-DIKQKMLDEIDKVEWVPQWAGQGRFRDWVDNA 480

Query: 157 VQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             W       +   +  ++       +               IS     L       +  
Sbjct: 481 KDWTISRQRYWGIPIPIWECPDCGELKVIGSVEELKNEALNDISVDDDELVHRPYVDEII 540

Query: 215 D----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G ++   P  ++ VWID+       + Y         +++P D    G D    
Sbjct: 541 MKCDKCGSEVKRIPD-VLDVWIDSGVA-GWASLYYPQQQEKFNQWFPYDFITEGHDQTRG 598

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++      +    +P  K +     +   G+K+SKSLGNV+ P EVIE+ G D LR++
Sbjct: 599 WFYSQLGTGVISMGQVPYKKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFY 658

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTES 386
           L+       D  +  D L   VN          V  +  M L +++    T       + 
Sbjct: 659 LLWASKPWDDLKFVWDELLN-VNKMFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDE 717

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPD 442
           D  I+S  + +++E+ E+++    H+A  ++ + +       Y      + W  +  +PD
Sbjct: 718 DNWIISRANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTWV-ESDDPD 776

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +     Y     I +L  +L    P +  +I++ L    +    +S+
Sbjct: 777 KLGA-YYSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDENAPESI 822



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 20/173 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +        Y + + H+G A+  +I D   R+  ++G  +    G D HG  I    + 
Sbjct: 40  PQYSFLDGPPYCSGKIHLGTAWNKVIKDSYLRYKSMNGFSLRRQAGWDMHGLPIEHKVEE 99

Query: 65  AG------------------VTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F   N        D L +   ++D   T + ++ +
Sbjct: 100 LMGIKSKQEIEENIGIAKFVDKCKEFAIDNKLAMEKEFDDLGVWMDWEDPYMTLDPKYME 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +     K+ +++  +        +    E      E+              PV
Sbjct: 160 SSWWTLKRANEQNLLVNDKRVISWCPHCETALAAAEIDYEEKVDPSIFVKFPV 212


>gi|74318463|ref|YP_316203.1| leucyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123758998|sp|Q3SG58|SYL_THIDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74057958|gb|AAZ98398.1| leucyl-tRNA synthetase, class Ia [Thiobacillus denitrificans ATCC
           25259]
          Length = 857

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 12/238 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R K Y  +   YP+ + H+GH     I DVLAR+H L G +V+   G D  G     A
Sbjct: 30  SDRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARYHALRGFNVMQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  + R     L   I +   + T +  ++   + L+ ++ +KG I
Sbjct: 90  AIANGVPPAQWTYANIDHMRTQLQALGFAIDWSRELATCKPDYYRWEQWLFTRLFEKGVI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  +   YFFR++ Y D+LLS 
Sbjct: 150 YKKMATVNWDPVDQTVLANEQVIDG----RGWRSGALVEKRDIPMYFFRITQYADELLSG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            ++ P +   ++          +G+      R  F + +    +  ++     D L  
Sbjct: 206 LDTLPGWPERVKTMQANWIGKSTGV------RLAFPYELDGSQEKLWVFTTRADTLMG 257



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 108/310 (34%), Gaps = 69/310 (22%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-- 282
           M  ++++   Y       Y D    ++A  W P D ++ G +    H +Y   F      
Sbjct: 497 MDTFVESSWYYARYACPDYADGMLDARADQWLPVDQYIGGIEHAILHLLYARFFHKLMRD 556

Query: 283 ------NLPLP--------------------KKVFSHG----------FILHKGE----- 301
                 + P                      KK + +            +   G+     
Sbjct: 557 EGLVASDEPFANLLTQGMVVADTYYREDAGGKKTWFNPADVETKDGVATLRADGKPVVVG 616

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKS  N +DP  +I++ G D  R F +      +   +   G++       A+  
Sbjct: 617 GTEKMSKSKNNGVDPQALIDQYGADTARLFTMFAAPPEQSLEWSDAGVEG------AHRF 670

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQV 417
              + ++V   ++    +    GA  E  +++     + +Q++ ++++ +   + A+A V
Sbjct: 671 LRRLWKTVYEHVQAGPVVTRAGGALPEPLKALRRQLHQTIQKVGDDIERRKQFNTAIAAV 730

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++             L K +   A T   V  E +  +A+LL   VP +   I   L
Sbjct: 731 MELMNA------------LAKLDGMDADT-RAVRQETLEAVAVLLAPIVPHVGEAIHAEL 777

Query: 478 FVADENRCFQ 487
                 R  +
Sbjct: 778 RPGAAMRWPE 787


>gi|302851887|ref|XP_002957466.1| hypothetical protein VOLCADRAFT_107675 [Volvox carteri f.
           nagariensis]
 gi|300257270|gb|EFJ41521.1| hypothetical protein VOLCADRAFT_107675 [Volvox carteri f.
           nagariensis]
          Length = 834

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 100/314 (31%), Gaps = 49/314 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA-----------------------DL 260
            + ++  W  +     +T G+ +        F+P                         +
Sbjct: 393 EEDVLDTWFSSGLWPFSTLGWPNTNSQEFKTFYPTQARRGGDEGGGKWGGMGGERCQGGM 452

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DIL F    +       +   P             KG K+SKSLGNV+DP++ I 
Sbjct: 453 METGHDILFFWVARMIMLGLEFTGQPPFSTIYLHGLVRDEKGRKMSKSLGNVVDPLDTIA 512

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G DALR+ L      G+D     + +    N        N +  +   +L + D +  
Sbjct: 513 QYGTDALRFTLATGTTVGQDLNLSLERVTASRN------FTNKLWNAGKFVLFNLDKVGA 566

Query: 379 TPGA---------------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           +                      +  I+S+  + + E+ +       + A     + + +
Sbjct: 567 SEWESLRGVSLSRAEDLQRLPLVERWIVSLLHQTVNEVSDRYDKYDYNAAGITAYNFLWD 626

Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D + +A K       +    S      V V   +  LL  F+P +  +++  L    
Sbjct: 627 EFADWFIEASKTRT-YGGDAAAQSASRAALVYVFESVLRLLHPFMPFVTEELWQALPHQG 685

Query: 482 ENRCFQSLDQRLKP 495
           E         R  P
Sbjct: 686 EALIMAPWPSRGCP 699


>gi|167766075|ref|ZP_02438128.1| hypothetical protein CLOSS21_00568 [Clostridium sp. SS2/1]
 gi|167712155|gb|EDS22734.1| hypothetical protein CLOSS21_00568 [Clostridium sp. SS2/1]
          Length = 1053

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/464 (13%), Positives = 143/464 (30%), Gaps = 24/464 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 ++ F    DE G    +           FV +         +   + YD     
Sbjct: 344 KVGRKYEMPFVQLVDERGNMSEETPFAGL-----FVKKADPEVLKDLESRGLLYD----- 393

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGAD----GQYYNA 152
              +   +    W+  +      +  +    +  +D+   N++ V         G++ + 
Sbjct: 394 -APKFEHSYPHCWRCDTPLIYYARESWFIKMTDVKDQLIANNNTVNWVPKSIGKGRFGDW 452

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N              ++
Sbjct: 453 LENVQDWGISRNRYWGTPLNIWECECGHQHSIGSIEELKSMSDNCPDDIELHRPYIDQVT 512

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G  +    + ++  W D+ +       Y           +PA+      D    
Sbjct: 513 IKCPHCGKPMHR-VEEVIDCWFDSGSMPFAQWHYPFENKEIFEDNFPANFISEAVDQTRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + LL    P    V         G+K+SKS GN +DP + +EE G DA+R++
Sbjct: 572 WFYSLMAISTLLFNKAPYKNVVVLGHVQDENGQKMSKSKGNAVDPFDALEEHGADAIRWY 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTES 386
                A      +    + +     +          ++   +  +D    T      +  
Sbjct: 632 FYTNSAPWLPNRFHAKAVTEGQRKFMGTLWNTYAFYTLYAEIDQFDPTKHTLEYDKLSVM 691

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++ + +N+ N  I  A   +   V ++ + Y    +     K       
Sbjct: 692 DKWLLSKMNTMVKSVDDNLGNYRIPEAARALQEFVDDMSNWYVRRCRDRFWAKGMEQDKV 751

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  +       +P +  +I+  +  + +    +S+
Sbjct: 752 NAYMTLYTALVTVCKAAAPMIPFMTEEIYQNIVRSVDASAKESI 795



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+             N +PHIGH    +I D++ R+  + G  ++   G D HG  +   
Sbjct: 38  KDDPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHKIIRKAGWDTHGLPVELE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +D +      ++   T +   
Sbjct: 98  VEKMLGLDGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSDTVGFWADMENPYITYDNNF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     + ++E
Sbjct: 158 IESVWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFKLVDE 217

Query: 163 EGYFFRLS 170
           + YF   +
Sbjct: 218 DAYFLAWT 225


>gi|86359694|ref|YP_471586.1| leucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|123724702|sp|Q2K2S7|SYL_RHIEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86283796|gb|ABC92859.1| leucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 876

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLDWSREFATCDVDYYQHQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +  +LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLTVRW 235



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 116/385 (30%), Gaps = 73/385 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G            L    +  +   P++R          
Sbjct: 434 WGISRQRYWGCPIPVIHCDACGVVPVPKKDLPVKLPEDVTFDQPGNPLDRHPTW------ 487

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                 ++        +   D            T +            +  ++ P D ++
Sbjct: 488 ----RHVACPNCGKDARRETDTMDTFVDSSWYFTRFTAPWEAKPTDPEAANRWLPVDQYI 543

Query: 263 IGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKG--------------- 300
            G +    H +Y              A     K +F+ G ++H+                
Sbjct: 544 GGIEHAILHLLYSRFFTRAMRETGHVAATEPFKGLFTQGMVVHETYSRGAGASREWVAPA 603

Query: 301 ---------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                      EK+SKS  NV+DP ++I   G D  R+F++ + 
Sbjct: 604 DIRIEEIDGKRRAFLLASDEEVAIGSIEKMSKSKKNVVDPDDIIASYGADTARFFVLSDS 663

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  + + G++       A+     + R +S        + P P +  E+  ++   
Sbjct: 664 PPERDVIWSEAGVEG------AHRFTQRLWRLISEAADCLSAVAPAPASEGEA-LTVSQA 716

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + L+ ++ +      ++A+A++  LV+ +             + +    + V     +
Sbjct: 717 AHKTLKAVQNDYDKLWFNKAVARIYELVNALAAPLTRVA---AGEGDIAYRAAVR----D 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
               L  L+    P LA + +  L 
Sbjct: 770 AAEILIQLVAPMTPHLAEECWAALG 794


>gi|258625830|ref|ZP_05720709.1| Valyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582068|gb|EEW06938.1| Valyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 953

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 135/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRSENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|149193818|ref|ZP_01870916.1| valyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135771|gb|EDM24249.1| valyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 858

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/413 (15%), Positives = 136/413 (32%), Gaps = 35/413 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN-DDEVYKGADGQYYNAQHNPVQWMEEE 163
               +       G  Y+        +  + +   +  +           + +P QW    
Sbjct: 325 FIEKIETHTHQVGHCYRCKSVIEPYVSTQWFLKKEIAIPAIKAANKGEVKFHPAQWKNNY 384

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             + R           +  H    +P+   NE  +        +           K    
Sbjct: 385 DAWMRELRDWCISRQLWWGHQ---IPVYYCNECGNEW----ASVEEPTNCPKCHSKNFHQ 437

Query: 224 PQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AI 273
              ++  W  +     +T G+ +          +    +F+P +L + G DIL F    +
Sbjct: 438 DPDVLDTWFSSALWPFSTLGWENGEWGKGIKWNEEDLNRFYPNNLLITGFDILFFWVARM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                     +P              G+K+SKS GNVIDP+E+IE+   D LR+ L    
Sbjct: 498 MMMGTHFLKEVPFKDVYLHALVRDEHGQKMSKSKGNVIDPLEMIEKYSADILRFTLAVLA 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G+D    ++ + +  N    N + N  +R + M    ++ +       TE  + ++  
Sbjct: 558 VQGRDIKLSENKMIEARN--FTNKLYN-AARFLKMHQDKFEDLE-NIEIKTELGKWMVYK 613

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVT 451
            +  ++ +R  ++    + A   +   +            W  EL K + +  S +    
Sbjct: 614 LNEAIKNVRNELEEYRFNDAAMTLYRFLW------QDFCDWGIELSKASKESISELGS-- 665

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             + ++   LL  F+P +   ++  L +         L +  +    + K  D
Sbjct: 666 --IFKEAMKLLHPFMPFITEFLYQELSLTTVKDNTIMLKEYPQAK-KVVKPAD 715



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 28  SKPKNFCIMMPPPNVTGSLHIGHALTFTLQDIIVRYKRMDGYATLWQPGTDHAGIATQNV 87

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K F   + +   R +      S + F  T ++ 
Sbjct: 88  VEKQILAEGKTKEELGREEFLKRVWKWKEFSGGKITTQLRRLGASPAWSRERF--TMDEG 145

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R+ +KK+ D+G I KG Y   +  +D A  + +  Y+  +G+    ++  V   E
Sbjct: 146 LQRAVRVAFKKLYDEGLIVKGNYMVNWCPKDGALSDIEVEYETHEGKLVYIKYPIVDSDE 205


>gi|295695843|ref|YP_003589081.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411445|gb|ADG05937.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 829

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   Y      YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 41  NRPHYYCLEMFPYPSGKLHMGHVRVYSIGDVVARVKRMQGYNVLHPMGWDAFGMPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  +++  +N  + R     L +SYD    + T    ++   + ++     +G  Y
Sbjct: 101 IQHGVHPRLWTYENIDHMRQQQKRLGVSYDWEREVTTCAPDYYKFTQWMFLLFYHRGLAY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +         +++V  G            V   E E +F R++ Y D+LL   
Sbjct: 161 RKKAAVNWCPHCVTVLANEQVENG----RCWRCGTEVTKRELEQWFLRITDYADRLLEDL 216

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++          +G
Sbjct: 217 DQLDRWPERVKVMQRNWIGRSTG 239



 Score =  119 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/380 (14%), Positives = 118/380 (31%), Gaps = 45/380 (11%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  + ++  I+          +     +          Q Y     P+ + +  G     
Sbjct: 400 WDGMHNREAIHAITAHLEEMGKGRFATSYRIRDWLISRQRYWGAPIPIVYCDHCGIVPVP 459

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                  L    S     +     NE               R+T         D      
Sbjct: 460 EDQLPVRLPEDVSFEPGTVSPLATNEDFVQTTCPKCGGPGRRET---------DTMDTFM 510

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLL 280
                   Y +        D    + W P D ++ G +    H +Y          A  +
Sbjct: 511 CSSWYYFRYTSPKETARPFDPEAVRKWLPVDDYIGGIEHAVLHLLYSRFFTKVLQDAGWV 570

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             + P  + + + G ++ +G K+SKS GNV+ P ++I   G D  R F++      +D  
Sbjct: 571 DFSEPF-RHLLTQGMVIKEGAKMSKSKGNVVSPDDIINRYGADTARLFILFAAPPDRDLE 629

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQ 399
           ++  G++              + R   ++ ++ +    P       +   +       ++
Sbjct: 630 WNDQGVEGS---------HRFLHRVWRLVNQNREVFHAPAGDRMAPAARDLRRKTHATIK 680

Query: 400 EIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++ E+  Q    +  ++ ++ LV+ +  Y             P  A    +     IR +
Sbjct: 681 KVTEDFAQRYTFNTGISAIMELVNAIYAY-------------PAEAD--PFTKAAAIRTV 725

Query: 459 AILLQAFVPKLANKIFDILF 478
            +LL    P +  +++  + 
Sbjct: 726 LLLLAPAAPHICEELWSQIG 745


>gi|126729334|ref|ZP_01745148.1| valyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710324|gb|EBA09376.1| valyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 1029

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 21/272 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            I  DP  ++  W  +    + T G+ +  +    +++P D+ + G DIL F    W A 
Sbjct: 586 PIFRDPD-VLDTWFSSGLWPIGTLGWPEPTE-EMKRYFPTDVLITGSDILFF----WVAR 639

Query: 279 LLSANLPLPKKVFSHGFIL------HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++   L +  ++  H   L       KG+K+SK+ GNVIDP+E+++E G DALR+     
Sbjct: 640 MIMMQLAVVDEIPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEYGADALRFTNASM 699

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DE 388
            + G       D +      +    + N    +    + D       P     +    ++
Sbjct: 700 ASIGGVLKLSVDRIAG--YRNFGTKLWNACRFAEMNHVFDSHESAADPAWVVPAQQTVNK 757

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAST 446
            I+   +RV + +   ++    + A + +   V     D Y +  KP      NP   + 
Sbjct: 758 WIVGETARVRETVDLALKEYRFNDAASALYGFVWGKVCDWYVEFSKP-LFDAENPAVVTE 816

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  V+ Q  I+L   +P +  +++  L 
Sbjct: 817 TRATMAWVLDQCLIMLHPIMPFITEELWGTLG 848



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 30/183 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   + D+L R+HR+ G D L+  G D  G       + 
Sbjct: 36  ESFSIMLPPPNVTGALHVGHAFNHTLMDILVRWHRMRGFDTLWQPGQDHAGIATQLQVEK 95

Query: 65  A-----------------GVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEK--- 100
                                   +  Q         + + D  D   + F  +      
Sbjct: 96  KLKAEKNVRRTDMTRAEFLNHVWDWKTQYGGTIIDQMKRIGDSCDWDRNAFTMSGAPGAP 155

Query: 101 ------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                   HD    ++  +  KG IY+G     +    E   +D EV       +     
Sbjct: 156 EADSRGNFHDAVIKVFVDMYQKGLIYRGKRLVNWDPHFETAISDLEVENIETPGHMWHFK 215

Query: 155 NPV 157
            P+
Sbjct: 216 YPL 218


>gi|262375811|ref|ZP_06069043.1| valyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309414|gb|EEY90545.1| valyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 964

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/405 (16%), Positives = 131/405 (32%), Gaps = 89/405 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++      +   +      +P +  N +     + ++D  +SR+   W
Sbjct: 379 VEPLLTDQWYVKIAPLAKPAIEAVKDGRIKFVPEQYSN-MYMAWMNNIQDWCISRQ-LWW 436

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 437 GHRIPAWYDAEGNVYVGRDEAEVRAKNNIPADVQLNQDEDVLDTWFSSGLWTFSTLGWTG 496

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           +    KA ++     P D+ V G DI+ F         +           +P        
Sbjct: 497 DEAKDKANYFLNTFHPTDVLVTGFDIIFFWVARMIMLTMHFMKNEDGTPQVPFKTVYVHG 556

Query: 294 GFILHKGEKISKSLGNVIDPIEVI------------------------------------ 317
                +G+K+SKS GNV+DP+++I                                    
Sbjct: 557 LVRDGEGQKMSKSKGNVLDPLDLIDGVDLETLVQKRTTGLMNPKQAAKIEKSTRKEFPEG 616

Query: 318 -EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            +  G DA+R+        G+D  +D   ++     + AN I N     +  +     G 
Sbjct: 617 IQSYGTDAVRFTFCALANTGRDIKFDMKRVEG--YRNFANKIWNATRFVMMNVEGQTVGQ 674

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
              P  +   ++ I+S   +    ++       +  A   +   +     D Y +  KP 
Sbjct: 675 TARPDLWELPEQWIVSRLQKATAAVQTAFATYRLDLAAQAIYEFIWNEYCDWYVELTKP- 733

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  V + V+     L    +P L  +I+  L
Sbjct: 734 VLNDENVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 778



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GH +   I D L RF+R+ G + L+  GTD  G      
Sbjct: 35  EKGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRFNRMSGKNTLWQPGTDHAGIATQMV 94

Query: 62  AQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +       +R  R +   +D S + F  T +  
Sbjct: 95  VERQLGAQGVSRHDLGREKFIEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             +  + ++ K+ ++G IY+G     +  + +   +D EV    +         
Sbjct: 153 LSNAVKEVFVKLHEEGLIYRGKRLVNWDPKLQTALSDLEVESDKEEAGSLWHFK 206


>gi|254291421|ref|ZP_04962213.1| valyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422611|gb|EDN14566.1| valyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 953

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 135/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKIEKNTRKTFENGIESYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|313669111|ref|YP_004049395.1| leucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006573|emb|CBN88037.1| putative leucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 876

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 18/194 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++          +  
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAHR--FLRRLWR 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            V   +    K       +    ++  + +       + ++ ++  + Q  + A+A V+ 
Sbjct: 691 TVYEYLKQ-GKAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAAVME 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L+++ D+            T  ++   V     EV+     LL   VP +   ++  L  
Sbjct: 750 LLNQYDK----------TDTGGEQGRAV---AQEVLEAAVRLLWPIVPHICETLWSELNG 796

Query: 480 AD-ENRCFQSLDQR 492
           A      + ++D+ 
Sbjct: 797 AKLWEAGWPTVDEA 810


>gi|213650456|ref|ZP_03380509.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 546

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y  + + YP+ + H+GH     I DV+AR+  + G +VL   G D  G     A
Sbjct: 30  ESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWDAFGLPAEGA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N    ++    L   YD    I T    ++   +  + ++  KG +
Sbjct: 90  AVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   +F +++AY D+LL  
Sbjct: 150 YKKTSAVNWCPNDQTVLANEQVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLRD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLDHWPDTVKTMQRNWIGRSEG 229


>gi|291287148|ref|YP_003503964.1| leucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884308|gb|ADD68008.1| leucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 850

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y      YP+ + H+GH     I DV++R+  + GL+VL   G D  G     AA
Sbjct: 29  TKEKFYCLEMFPYPSGKIHMGHVRNYAIGDVISRYKFMQGLNVLHPIGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                   V+  QN    +     L ++Y  D  I T +  ++   + ++ ++ +KG IY
Sbjct: 89  IENSTHPAVWTKQNISYMKQQLKKLGLAYDWDREIATCDPEYYKWEQKIFIEMWEKGLIY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V  GA         N V   E +G++ +++ Y D+LL Y 
Sbjct: 149 KKKSHLNWCDDCNTVLANEQVEDGA----CWRCGNEVAIKELDGWYLKITDYADELLEYT 204

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +  P +   +            G           D+ IK  DD   +     D L  
Sbjct: 205 DKLPGWPSKVLTMQSNWIGKSYG--------AKIDFKIKDIDDKITVFTTRPDTLFG 253



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 84/229 (36%), Gaps = 31/229 (13%)

Query: 271 HAIYWPAFLLSANL-PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           H   +P            K V          EK+SKS  NV+DP ++I+E G D  R F+
Sbjct: 583 HGWLFPEDSTDGKCSKCGKDVTVGRV-----EKMSKSKKNVVDPNKLIQEYGADTARLFI 637

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-- 387
           +      ++  +    ++              ++R   +I  + +         TE D  
Sbjct: 638 LFASPPERELEWSDTAVEGS---------FRFINRVWRLIQNNVNLFKEELPTSTEDDIT 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           + IL   +  ++++ E+++   ++  +A ++  V+             L    P      
Sbjct: 689 KEILFHTNVTVKKVTEDIERYQLNTCVAAMMEFVN------------NLYAIEPKIQDGH 736

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLK 494
                + I  L  L+  F P  A +++++  +        + S D++L 
Sbjct: 737 KTHFKDAILTLMKLMAPFTPHAAEELYEMTGLPGHISRSDWPSFDEKLT 785


>gi|118496828|ref|YP_897878.1| valyl-tRNA synthetase [Francisella tularensis subsp. novicida U112]
 gi|194324490|ref|ZP_03058262.1| valyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|118422734|gb|ABK89124.1| valyl-tRNA synthetase [Francisella novicida U112]
 gi|194321325|gb|EDX18811.1| valyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 919

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDVAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNAVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T ++   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDEGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVADSDEK 213


>gi|299065703|emb|CBJ36877.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum CMR15]
          Length = 883

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 15/229 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITEYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            +       P+     V    ++ +      R  F  GI    D   ++
Sbjct: 212 LD-------PLGWPERVKLMQQNWIGKSEGVRFAFPHGIP--GDDGKVI 251



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 119/362 (32%), Gaps = 50/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 485 SGNPLAKDARFLECTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDGATMVD-GRND 541

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 542 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTKLLTQGMVL----NETYY 597

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    P D+ V   D             + A L    +    G +    EK+S
Sbjct: 598 REDAAGKKQWINPVDVDVQTDD---------RGRPVGATLKADGQPVVIGGV----EKMS 644

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I+E G D  R F +      +   +   G++         G    + R
Sbjct: 645 KSKNNGIDPQALIDEYGADTARLFTMFAAPPEQQLEWSDAGVE---------GASRFLRR 695

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + +  +   + +    G       T++D ++      VL++   + +    +  ++  + 
Sbjct: 696 AWNFGVAHAESIRAGHGNGVVNGATDADRALRRELHTVLKQANYDYERLQYNTVVSAAMK 755

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++ +          E  K     A        E +  L  +L   VP + + ++  L  
Sbjct: 756 MLNAL----------EGAKDAGADAR------REGLGILLRVLYPVVPHITHVLWQELGY 799

Query: 480 AD 481
           A 
Sbjct: 800 AG 801


>gi|51245648|ref|YP_065532.1| valyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826816|sp|Q6AMA0|SYV_DESPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50876685|emb|CAG36525.1| probable valyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 887

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 143/400 (35%), Gaps = 44/400 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D ++        LR++ Y  + E Y  A G  Y      ++      +F  +    
Sbjct: 313 YAGLDRFECRKQIVEDLREQGYLVEIEDYDHAVGHCYR-CKTVIEPTTSLQWFVSVKPLA 371

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
            K +         I P    N   S++   ++D  +SR+   WG +IP            
Sbjct: 372 AKAVDAVRDGQINIYPKTWYNTFYSWMD-NIRDWCISRQ-IWWGHRIPAWSCADCGELIV 429

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W  +     +T G+ +N       F+P  + +   
Sbjct: 430 ETEDPTSCPKCGSSKLSQETDVLDTWFSSALWPFSTMGWPENTK-ELQTFYPTSVLITSF 488

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DIL F    +      L   +P              G+K+SKS GNVIDP+E++ + G D
Sbjct: 489 DILFFWVARMMMMGLHLMDEVPFKDVYLHALVRDKHGKKMSKSTGNVIDPLEIMAQYGTD 548

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PT 379
           ++R+ L    A G++   D+D ++        N I N  +R   M + D D  I     T
Sbjct: 549 SMRFTLTAFAAQGREIKLDEDRIEG--YRHFINKIWN-AARFAQMHIGDCDDSIRVAVET 605

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
           P         ILS  +++++ I  +++  L +   +     +     D Y +  K  +L 
Sbjct: 606 PKDLALGHRWILSRTAKLVEGIHRSLRGYLFNEVASLNYQFIWKEFCDWYLEWIKS-DLF 664

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +           + V+  +   L    P +  +I+ +L
Sbjct: 665 SDDLVARDQARGCLMVVLETILKTLHPITPFVTEEIWSVL 704



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 19/162 (11%)

Query: 1   MKE-REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M++ ++   I           H+GHA    + D+L R+HR+ G + ++  GTD  G    
Sbjct: 34  MEDGKDAFSIVIPPPNVTGVLHVGHALNNTLQDILVRYHRMCGDNTMWIPGTDHAGIATQ 93

Query: 60  KAAQNAGVTT---------KVFVDQNSRNFRD-------MADVLDISYD--DFIRTTEKR 101
              +    T          + F+++  +   D           +  S D      T ++ 
Sbjct: 94  NVVERQLATEGKGRHDLGREAFIERVWKWREDKGGTIVNQLKKIGSSCDWERERFTMDEG 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + R ++ ++  +G IYKG Y   +  R +    DDEV  
Sbjct: 154 LSTSVREVFVRLYKEGLIYKGDYIVNWCPRCQTALADDEVEH 195


>gi|17547463|ref|NP_520865.1| leucyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|48428559|sp|Q8XVT3|SYL_RALSO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17429766|emb|CAD16451.1| probable leucyl-trna synthetase (leucine--trna ligase) (leurs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 877

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 15/229 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMMRQLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITDYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            +       P+     V    ++ +      R  F  GI    D   ++
Sbjct: 212 LD-------PLGWPERVKLMQQNWIGKSEGVRFAFPHGIP--GDDGKVI 251



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 120/362 (33%), Gaps = 50/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 SGNPLAKDARFLECTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDGATMVD-GRND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTKLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    PAD+ V   D             + A L    +    G +    EK+S
Sbjct: 592 REDAAGKKQWINPADVDVQTDD---------RGRPIGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWSDAGVE---------GASRFLRR 689

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + +  +   + +    G       T++D ++      VL++   + +    +  ++  + 
Sbjct: 690 AWNFGVAHAESIRAGHGNGVVNGATDADRALRRELHTVLKQANYDYERLQYNTVVSAAMK 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++ +          E  K     A        E +  L  +L   VP + + ++  L  
Sbjct: 750 MLNAL----------EGAKDAGADAR------REGLGILLRVLYPVVPHITHVLWQELGY 793

Query: 480 AD 481
           A 
Sbjct: 794 AG 795


>gi|16767720|ref|NP_463335.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167991264|ref|ZP_02572363.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|81520710|sp|Q8ZK31|SYV_SALTY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16423040|gb|AAL23294.1| valine tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|205330315|gb|EDZ17079.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261249563|emb|CBG27430.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996819|gb|ACY91704.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160959|emb|CBW20493.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915572|dbj|BAJ39546.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321222554|gb|EFX47626.1| Valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323132812|gb|ADX20242.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 951

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|295677677|ref|YP_003606201.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437520|gb|ADG16690.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 863

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 30  TDKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMANNVPPAQWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 71/182 (39%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F++      +   +   G++    +     + N
Sbjct: 622 EKMSKSKNNGVDPQMLIDQHGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWN 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
               + + +     G       F ++D+++      VL++   + Q    +  ++  + +
Sbjct: 680 FGYTNEAALR---TGGQLDAAQFNDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 736

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                  A T   V  E    +  +L   VP L  +++  L  A
Sbjct: 737 LNALD--------------GAKGAQTA--VLRETYGVMLRVLYPVVPHLTFQLWQELGYA 780

Query: 481 DE 482
           DE
Sbjct: 781 DE 782


>gi|330887714|gb|EGH20375.1| valyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 941

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 362 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 419

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 420 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 479

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 480 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 538

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 539 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 598

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 599 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 653

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 654 EAVELSLADRWIISQLQRTETEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 713

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R     +  V V+     L   F+P +  +I+  L
Sbjct: 714 DETAPVERQRGTRHTLVRVLEVALRLAHPFMPFITEEIWQRL 755



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 27  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 86

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 87  AQGISRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 144

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 145 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWKLRYPL 194


>gi|320322893|gb|EFW78984.1| valyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 948

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         +           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVDKRTSGLMQPHLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|319409376|emb|CBI83020.1| Leucyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 874

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 89/238 (37%), Gaps = 7/238 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  GREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  KV+  QN    R     L +S D      T +  ++   ++++    +KG I 
Sbjct: 92  MQNKVHPKVWTYQNIAVMRGQLKQLGLSLDWSREFATCDVEYYHRQQMIFLDFYEKGLIA 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S + + LL+  
Sbjct: 152 RKVAKVNWDPVDHTVLANEQVVDG----RGWRSGALVEQRELTQWFFKISDFSEDLLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           E   ++   +    +       G L   +L +      I    D         D L  
Sbjct: 208 ERLDKWPEKVRIMQKNWIGKSQGLLISWALDKTNVADDICQEFDEVVCYSTRPDTLFG 265



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 79/178 (44%), Gaps = 16/178 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N+IDP ++I   G D +R+F++ +    +D  + + G++          I  
Sbjct: 631 EKMSKSKKNIIDPDDIIASYGADTVRWFMLSDSPPERDVIWTEAGIEGAHR--FVQRIWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V+ S S +LK+ +      G   E    +  V  R L  + ++++    +RA+A++  L
Sbjct: 689 CVALSAS-VLKEVEPRTGRHGEALE----LSKVAHRTLCAVEDDLEKLAFNRAVARLYEL 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++ +  + +     +++  + +  S       + +     ++   +P LA +      
Sbjct: 744 LNTMTPFLN-----KVENIDDEMKSA----LRQAMDFFFAMIAPIMPHLAEECHAAFG 792


>gi|309379503|emb|CBX21869.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 876

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G+    ++  + +       + ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 747 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|222445643|ref|ZP_03608158.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435208|gb|EEE42373.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii
           DSM 2375]
          Length = 1090

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 82/467 (17%), Positives = 156/467 (33%), Gaps = 24/467 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F      D+      DE G     A + AG     F    +           + Y +   
Sbjct: 366 FEVGKAYDLPIFCPVDESGNFTDDAGKYAG----EFCKAANDGIIADLQESGLMYRNETI 421

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                    C+     ++ K    K        + DE    +        G++ +   N 
Sbjct: 422 EHRYGVCWRCKTPIIYLATKQWFLKVT-DIKQKMLDEIDKVEWVPQWAGQGRFRDWVDNA 480

Query: 157 VQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             W       +   +  ++       +               IS     L       +  
Sbjct: 481 KDWTISRQRYWGIPIPIWECPDCGELKVIGSVEELKNEALNDISVDDDELVHRPYVDEII 540

Query: 215 D----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G ++   P  ++ VWID+       + Y         +++P D    G D    
Sbjct: 541 MKCDKCGSEVKRIPD-VLDVWIDSGVA-GWASLYYPQQQEKFNQWFPYDFITEGHDQTRG 598

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++      +    +P  K +     +   G+K+SKSLGNV+ P EVIE+ G D LR++
Sbjct: 599 WFYSQLGTGVISMGQVPYKKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFY 658

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTES 386
           L+       D  +  D L   VN          V  +  M L +++    T       + 
Sbjct: 659 LLWASKPWDDLKFVWDELLN-VNKMFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDE 717

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPD 442
           D  I+S  + +++E+ E+++    H+A  ++ + +       Y      + W  +  +PD
Sbjct: 718 DNWIISRANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTWV-ESDDPD 776

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +     Y     I +L  +L    P +  +I++ L    +    +S+
Sbjct: 777 KLGA-YYSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDENAPESI 822



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 20/173 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +        Y + + H+G A+  +I D   R+  ++G  +    G D HG  I    + 
Sbjct: 40  PQYSFLDGPPYCSGKIHLGTAWNKVIKDSYLRYKSMNGFSLRRQAGWDMHGLPIEHKVEE 99

Query: 65  AG------------------VTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F   N        D L +   ++D   T + ++ +
Sbjct: 100 LMGIKSKQEIEENIGIAKFVDKCKEFAIDNKLAMEKEFDDLGVWMDWEDPYMTLDPKYME 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +     K+ +++  +        +    E      E+              PV
Sbjct: 160 SSWWTLKRANEQNLLVNDKRVISWCPHCETALAAAEIDYEEKVDPSIFVKFPV 212


>gi|72119932|gb|AAZ62195.1| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 888

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 51  KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 111 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGIA 170

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y ++LL  
Sbjct: 171 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAIVEKREIPMYYLRITDYAEELLGD 226

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 227 LDGLGWPERVKIMQQNWI 244



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 117/358 (32%), Gaps = 44/358 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 494 TGNPLNKDPRFLQCSCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAATMVD-ARND 550

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 551 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETFY 606

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D             + A L    +    G +    EK+S
Sbjct: 607 REDAAGKKTWYNPADVDVQTDD---------RGRPVGATLKADGQPVVIGGV----EKMS 653

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F++      +   +   G++    +     + N    
Sbjct: 654 KSKNNGIDPQALIDQHGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWNYGFA 711

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           + + +            A T  D  +      VL++   + Q    +  ++  + +++ +
Sbjct: 712 NAAAVRDGAG------AAPTADDADLRREIHGVLKQANYDYQRIQYNTVVSATMKMLNAL 765

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                            D  +       E    L  +L   VP + + ++D L  A +
Sbjct: 766 ----------------EDAKNASPVARRECFGILLRVLYPVVPHITHGLWDALGYATQ 807


>gi|197251578|ref|YP_002149395.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197215281|gb|ACH52678.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 951

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|227823849|ref|YP_002827822.1| leucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254782510|sp|C3MB60|SYL_RHISN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|227342851|gb|ACP27069.1| leucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 876

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN    +    V+ +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPAGWTYQNIAAMKAQLKVMGLSLDWSREFATCDPAYYQRQQYLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR++ +   LL   +
Sbjct: 153 RQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFRITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
              ++   +    +       GL    
Sbjct: 209 GLEQWPEKVRLMQKNWIGRSEGLALRW 235



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 123/407 (30%), Gaps = 85/407 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G      A     L    +  +   P++R          
Sbjct: 434 WGISRQRYWGCPIPVIHCEDCGVVPVPKADLPVTLPPDVTFDKPGNPLDRHPT------- 486

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PAD 259
                         G     +    M  ++D+   Y            D   A  W P D
Sbjct: 487 -----WRHVACPQCGKDARRETD-TMDTFVDSSWYYARFTAPWEDKPTDPKAANHWLPVD 540

Query: 260 LHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKG------------ 300
            ++ G +    H +Y         A    A     K +F+ G ++H+             
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMKATGHVAMDEPFKGLFTQGMVVHETYSRGEGAQREWV 600

Query: 301 ------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                         EK+SKS  NV+DP ++I   G D  R+F++
Sbjct: 601 TPAEIRIDEIDGRRRAVLIETGEEVAIGSIEKMSKSKKNVVDPDDIIGSYGADTARFFVL 660

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE-- 388
            +    +D  + + G++         G    V R   ++ +  + +     +  +  E  
Sbjct: 661 SDSPPDRDVIWSEAGVE---------GAHRFVQRVWRLVGEAAESLRGAKASPAKEGEGL 711

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +I     R L+ +  +      ++A+A++  LV+ +        P             V 
Sbjct: 712 AISQAAHRTLRAVEADYDKLAFNKAVARIYELVNVL------AAPLTQVAAGKAD-QAVT 764

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
               +    L  L+   +P LA + +  +        R + + D  L
Sbjct: 765 AAVKDATTILIDLIAPMMPHLAEECWREIGGEGLIAERPWPTFDPAL 811


>gi|262170554|ref|ZP_06038232.1| valyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261891630|gb|EEY37616.1| valyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 953

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 135/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|77457213|ref|YP_346718.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|77381216|gb|ABA72729.1| valyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 948

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 133/428 (31%), Gaps = 97/428 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 371 IEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 429 GHRIPAWYDESGKVYVGRDEAEVRAKHNIGPDVALQQDNDVLDTWFSSGLWTFSTLGWPE 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P             
Sbjct: 489 KTEFLKKFH-STDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYVHGLVRDG 547

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 548 QGQKMSKSKGNVLDPLDIIDGIELETLVQKRTSGLMQPKLAKKIEKQTREEFADGIASYG 607

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N     +    K  D       
Sbjct: 608 TDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNGEA 662

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L  
Sbjct: 663 YELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VLWD 721

Query: 439 TNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQSL--- 489
            N   +R        V V+     L   F+P +  +I+  +     +  +    Q+    
Sbjct: 722 ENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGIQGKTIMLQAWPVA 781

Query: 490 -DQRLKPG 496
            ++R+ P 
Sbjct: 782 NEERIDPA 789



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       SR  R +   +D S + F  T +    +  +
Sbjct: 94  AQGQNRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERF--TMDDGLSEAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGFLWNLKYPL 201


>gi|147674393|ref|YP_001218001.1| valyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262167534|ref|ZP_06035239.1| valyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|146316276|gb|ABQ20815.1| valyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227014393|gb|ACP10603.1| valyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262023987|gb|EEY42683.1| valyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 953

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 135/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|85714102|ref|ZP_01045091.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85699228|gb|EAQ37096.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 877

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  REKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYKRARGYNVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  K +   N    +     + +S D    I T +  ++   + ++      G   +
Sbjct: 92  ERKIAPKAWTYDNIEAMKKQLRSIGLSLDWSREIATCDPAYYKHQQKMFLDFLRAGLAER 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 152 EKRKINWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITKYAQELLEALD 207

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +            GL
Sbjct: 208 TLDRWPDKVRLMQRNWIGRSEGL 230



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 10/178 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G++    A     +  
Sbjct: 628 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQGA--ARFMQRLWR 685

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ +              P  F      +       L  +   ++    +  LA +   
Sbjct: 686 LVNEAAD---AGKSAPQDRPATFGAEASGLRKAAHGALDRVSTGIERLHFNVCLANIREF 742

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +E+    DA        + P  A  + +   E    L  +    +P LA + +  L 
Sbjct: 743 ANELA---DALARSRASGSAP--APDLSWSLREAATILVQVFSPMMPHLAEECWRALG 795


>gi|168464643|ref|ZP_02698546.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|195632560|gb|EDX51014.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
          Length = 951

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEEEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|24374934|ref|NP_718977.1| valyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81460030|sp|Q8EBS5|SYV_SHEON RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24349646|gb|AAN56421.1|AE015778_9 valyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 958

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 135/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDTNGKVYVGRTEAEVRAKHDIDDAIALRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NVEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +  D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEGQDCGPNSPD 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   E+M +     A   +         D Y +  KP
Sbjct: 668 YQGGEMELSLADRWIIDLFNQTVKTYDEHMASYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+     +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGTEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 21/175 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-- 65
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLE 95

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
                                +  Q+          +   + +D    T ++      + 
Sbjct: 96  AEEGKSRHDLGRDVFMEKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQE 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ ++ +   IY+G     +  +     +D EV       +      P+   E  
Sbjct: 156 VFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKEKQGHMWHLRYPLADGELT 210


>gi|303253010|ref|ZP_07339164.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302648142|gb|EFL78344.1| valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
          Length = 954

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEAGNVYVARNEEEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 ENGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGK 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   RE +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIESTFNRTVGTFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKPVFANG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 731 TDAQKRGA-SQTLVRVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|269216160|ref|ZP_06160014.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130419|gb|EEZ61497.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 859

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+   H+GH     I DV+AR+ R+ G DVL   G D  G     AA
Sbjct: 30  GRPKKYVLEMFPYPSGDIHMGHVRNYTIGDVIARYSRMQGFDVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    +     +  SYD    +   +  ++   + ++++   +G + 
Sbjct: 90  IKRHSHPAKWTYSNIETQKASFKRMGFSYDWNRSVVACDPEYYRWGQWIFEQFWKRGLVE 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V  G          + V+  +   ++F+++ Y  +LL   
Sbjct: 150 RRNSPVNWCPSCATVLANEQVIDG----RCWRCDSEVEKRDLTQWYFKITDYAQELLDDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++++         G
Sbjct: 206 DQLEGWPERVKQQQSNWIGRSEG 228



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 100/287 (34%), Gaps = 35/287 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y          D + A  W P D ++ G +    H +Y   F   
Sbjct: 517 DTMDTFTCSSWYYMRYTDPHNQSAPFDPATANAWMPVDQYIGGIEHAILHLLYSRFFTKV 576

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +L  + P    +     +   G+ +SKS GNVI P ++I   G DA+R +++   
Sbjct: 577 LRDMGMLDFDEPFSNLLCQGMVLDEHGDVMSKSKGNVIAPEDMIASYGADAVRAYILFMA 636

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK------DYDGMIPTPGA----F 383
              K+  +++DGL          G+   ++R+  ++        D       PG      
Sbjct: 637 PPDKELLWNEDGL---------AGLSKFLNRAWRIVFDLKREGGDDSLFQADPGKGAPRS 687

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
             +   +L    RV  ++ ++      + A+A ++ LV+    Y        +   +   
Sbjct: 688 DAARAKLLRERHRVAAKVADDFGRNAFNTAIAAIMELVNAASDYL------RVTGADDRV 741

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI-LFVADENRCFQSL 489
           +        ++   +  LL    P  A +++   L   + +   Q+ 
Sbjct: 742 SDEAASFDADMAETIVKLLAPIAPHWAEELWTTVLGHKETSVHAQAW 788


>gi|325917730|ref|ZP_08179918.1| valyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536059|gb|EGD07867.1| valyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 946

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 138/417 (33%), Gaps = 91/417 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDALAKRGLELVESGQIQFVPPNWINT-YRHWMENIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D     YV                            W  +     +T G+ D
Sbjct: 430 GHRIPAWFDEAGKCYVGHDEAEVRAKHGLGAQIALHQDSDVLETWFSSQLWPFSTLGWPD 489

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +    A++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 490 ADAMAERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQGQ 549

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 550 KMSKSKGNVLDPLDIIDGISIEDLVAKRTTGLMKPKDAPKIEKATRREFPDGIIAHGADA 609

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + +G   T  P  
Sbjct: 610 LRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTEGARFTGVPQP 663

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK-- 438
            TE+++ IL+   +V  E   +  N         +         D + +  KP  L    
Sbjct: 664 RTEAEKWILARLDKVTAETHAHYANYRFDLLTQALYEFAWNAFCDWFVELAKP-ALNGAV 722

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCFQSLDQ 491
            + D A +  +  + V+  L  LL    P +  +++      L +       Q+  Q
Sbjct: 723 QDNDAAVSTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPRLGITAATISLQTFPQ 779



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGFDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGNGETRDSLGREGFIAKVWEWKAQSGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|254516563|ref|ZP_05128622.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674986|gb|EED31353.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 822

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y  +   YP+ + H+GH     I+D +AR+ R+ G +VL   G D  G     AA
Sbjct: 34  EGEKFYCLSMFPYPSGKLHMGHVRNYSISDAIARYQRMLGKNVLHPMGWDAFGLPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N  + R+    L  S+D    + T    ++   +  + ++ +KG +Y
Sbjct: 94  IANKTAPAKWTYSNIGHMREQLKALGFSFDWERELATCTPEYYRWEQWFFTRLYEKGLVY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            ++  E   +F R++AY ++LL+  
Sbjct: 154 KKMATVNWDPVDQTVLANEQVIDG----RGWRSGALIERREIPQWFIRITAYAEELLNDL 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +            G
Sbjct: 210 DKLEGWPDAVRTMQRNWIGKSRG 232



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 42/279 (15%)

Query: 232 IDALTNYLTTTGYLD----NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL------- 279
               + Y       +      D  +A +W P D +V G +    H +Y   F        
Sbjct: 499 FVQSSWYYARFTCPEFADGMLDKEQADYWLPVDQYVGGIEHAILHLLYARFFHKLMRDEG 558

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            LS++ P   ++ + G +L  G K+SKS GN +DP  +I+  G D +R F +      + 
Sbjct: 559 LLSSDEPFT-RLLTQGMVLKDGAKMSKSKGNTVDPQSLIDSHGADTVRLFSLFAAPPDQS 617

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCS 395
             + +DG++         G    V R   +  +  D         GA  +++  +     
Sbjct: 618 LEWSEDGVE---------GAHRFVKRLWRLAHEHTDKGPAPGLDTGALGDAERDVRRKIH 668

Query: 396 RVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             + ++ ++M  +   + A+A ++ L +E+ R         L   +P   +    V  E 
Sbjct: 669 ETIAKVSDDMGRRQTFNTAIAAIMELCNELGR---------LPGDSPQSRA----VLQEG 715

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQ 491
           +  +  +L   VP + + ++ +L    +     + S+D+
Sbjct: 716 LDAVVRMLVPIVPHICHHLWGLLSGDGDVSYAPWPSVDE 754


>gi|126667528|ref|ZP_01738498.1| valyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627954|gb|EAZ98581.1| valyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 956

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 125/399 (31%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 378 IEPMLTDQWFADAKTLAKPAIEAVEDGRIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 435

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 436 GHRIPAWYDAEGNIYVGRSEEEVRQKHSLAADFALKQDDDVLDTWFSSALWTFGTLGWPE 495

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F                     +P      +      
Sbjct: 496 TTERLKTFH-PTDVLVTGFDIIFFWVARMIMMTTHFMKNEDGTPQVPFKTVYVTGLIRDE 554

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            GEK+SKS GNVIDP+++I+ +                                     G
Sbjct: 555 NGEKMSKSKGNVIDPLDMIDGIDLAPLLEKRTGNLMQPKLAKKIAKQTEKEFPEGISAHG 614

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L      G+D  +D   L+     +  N + N     +     +  G+   P 
Sbjct: 615 TDALRFTLAAMATTGRDINWDMKRLEG--YRNFCNKLWNAARYVLMNTEGEGCGVNGEPV 672

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
             + +D  I+S   +  Q++  ++       A   +   +     D Y +  KP     +
Sbjct: 673 ELSLADRWIISALQQCEQDVARHLDQYRFDLASQALYEFIWNEYCDWYLELSKPSLSDDS 732

Query: 440 NPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               A        V V+  +  L    +P +  +I+  +
Sbjct: 733 ASAEAKRGTRRTLVRVLETVLRLAHPIMPFITEEIWQRI 771



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I+          H+GHA++  I D L R+ R+ G + L+  G+D  G      
Sbjct: 34  SEGESYSIAIPPPNVTGSLHMGHAFQHTIMDTLTRYKRMQGHNTLWQVGSDHAGIATQMV 93

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+ +                R + + +D   + F  T + 
Sbjct: 94  VERKLAAEEGKTRHDLGREEFIKRIWEWKEESGGTITDQMRRLGNSVDWDTERF--TMDD 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +   + ++ ++ + G +Y+G     +  +     +D EV    +  ++     P+
Sbjct: 152 GFYKAVQEVFVRLYEDGLVYRGKRLVNWDTKLHTAISDLEVENKEEKGFFWHLRYPL 208


>gi|239832887|ref|ZP_04681216.1| leucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239825154|gb|EEQ96722.1| leucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 883

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 38  SREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    R     + +S D      T +  ++   ++L+  + +KG + 
Sbjct: 98  MQNKVHPKEWTYQNIATMRGQLKSMGLSLDWAREFATCDVEYYHRQQMLFIDLFEKGLVT 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ + ++LL+  
Sbjct: 158 RKTSKVNWDPVDNTVLANEQVVDG----RGWRSGALVEQRELTQWFFKITDFSEELLAGL 213

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           ++  ++   +            GL+  
Sbjct: 214 DTLDQWPEKVRLMQRNWIGKSEGLQVR 240



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 119/386 (30%), Gaps = 79/386 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 440 WGISRQRYWGCPIPMIHCEACGVNPVPRADLPVKLPDDVEFDRPGNPLDRHATW-RHVKC 498

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD 259
                   R+T              M  ++D+   Y   T   +N    +A   ++ P D
Sbjct: 499 PKCGGDARRET------------DTMDTFVDSSWYYARFTAPWENEPTDRAVADRWLPVD 546

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKGE------ 301
            ++ G +    H +Y   F  +  +               + +  H      G+      
Sbjct: 547 QYIGGIEHAILHLLYSRFFTRAMKVAGHVGIDEPFKGLFTQGMVVHETYKANGQWVAPAD 606

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP ++I   G D  R+F++ +  
Sbjct: 607 IRIEETDGKRMASLLSTGEPVEIGSIEKMSKSKKNVVDPDDIIASYGADTARWFMLSDSP 666

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL--S 392
             +D  + + G         A G    V R   +I +  + +           E+++   
Sbjct: 667 PERDVIWTEAG---------AEGAHRFVQRVWRLISEAAEQLKDVAPKTGTEGEALVVSK 717

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              + ++ + ++++    +R +A++  LV+ V               +      V   T 
Sbjct: 718 AAHKAVKAVGDDIEKLAFNRGVARLYELVNTVAGPLQQVAS---GNADDVLKGAVRDAT- 773

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
               +L ++L   +P LA +    L 
Sbjct: 774 ---EKLILMLAPMMPHLAEQCLAALG 796


>gi|27904876|ref|NP_778002.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29427406|sp|P59433|SYL_BUCBP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27904274|gb|AAO27107.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 861

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y    I YP+ + H+GH     I+DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  SNKEKFYCLAMIPYPSGKLHMGHVRNYTISDVIARYQRMLGKNVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N +  +     L +SY  D  I T +  ++   +  + ++  K  +
Sbjct: 90  AIKNNTHPAQWTYENIKYMKQQLISLGLSYDWDREITTCKPEYYQWEQWFFIELYKKNLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V      +     +N V   +   +F +++ Y ++LL+ 
Sbjct: 150 YKKKSWVNWCEYDKTVLANEQVIN----ELCWRCNNKVIKKKIFQWFIKITKYAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            ++ PE+   ++           G+
Sbjct: 206 LDNLPEWPEKVKTMQHNWIGRNHGI 230



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 107/329 (32%), Gaps = 74/329 (22%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIY 274
           KI          ++++   Y   T    +      K    + P D ++ G +    H IY
Sbjct: 480 KIAICESDTFDTFLESSWYYARFTCNNFHKGMISQKLANYWLPVDQYIGGIEHAVMHLIY 539

Query: 275 WPAFL--------LSANLPLPK-------------------------------------K 289
           +            + +N P+ K                                     K
Sbjct: 540 FRFVHKLLRDLGLVYSNEPVKKLLCQGMVLSDAFYYFDHNKQKQWISAKSITIKYDSNHK 599

Query: 290 VFSHGFILHKGE------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           + SH +  +K        K+SKS  N I+P ++I++ G D +R F++          + +
Sbjct: 600 IQSHFYSNNKKIFHAGMIKMSKSKFNGIEPEDIIKKYGTDTIRLFIMFAAPVESALEWKE 659

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+K          +  L    + +       +      FTE  + I S   + ++ + +
Sbjct: 660 SGVKGIH--KFLKKLWVLSYNHIKL---YNHKIKLRINLFTEQQQHIYSELHKTIKIVSQ 714

Query: 404 NM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +   Q  + A+++++   + +           LK               E +  +  +L
Sbjct: 715 YITDTQSFNVAISKIMKFSNTL-------MSISLKNEQNQAL------MQESLLAVIQML 761

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
             F+P  +  I++ L    EN  F S  +
Sbjct: 762 YPFIPHFSFAIWEFLSPKKENIDFISWPK 790


>gi|325204849|gb|ADZ00303.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 876

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 747 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|194444143|ref|YP_002043715.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194402806|gb|ACF63028.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
          Length = 951

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEEEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|194364311|ref|YP_002026921.1| valyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|254783558|sp|B4SJ70|SYV_STRM5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|194347115|gb|ACF50238.1| valyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 942

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/396 (16%), Positives = 128/396 (32%), Gaps = 82/396 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++     + L   E      +P    N       + ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDDLAKRGLELVEDGSISFVPPNWINT-YRHWMNNIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDP-----------------------------QYIMYVWIDALTNYLTTTGYL 245
           G  I    D                                ++  W  +     +T G+ 
Sbjct: 430 GHRIPAWFDEATGSCYVGRSEEEVRAKHSLGSDVVLNQESDVLETWFSSQLWPFSTLGWP 489

Query: 246 DNPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           +    +     ++ P+ + + G DI+ F    +      L   +P     F+      +G
Sbjct: 490 NEQAMAERGFDRYLPSSVLITGFDIIFFWVARMIMATDNLVGKIPFKDVYFTGLIRDGQG 549

Query: 301 EKISKSLGNVIDPI-------------------------------------EVIEEVGVD 323
           +K+SKS GNV+DP+                                     + I   G D
Sbjct: 550 QKMSKSKGNVLDPLDIIDGISIDDLVAKRTGGLMQPKMVEKIEKATRKEFPDGIAAHGAD 609

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ +      G+D  +D +  +   N    N + N  SR   M  +        P   
Sbjct: 610 ALRFTIAALATHGRDIKFDMNRAEGYKN--FCNKLWN-ASRFTLMNTEGAAFTGM-PTPR 665

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T+++  ILS  + V  E + +  N         +         D + +  KP  L   + 
Sbjct: 666 TDAERWILSRLAAVSSEAQGHYANYRFDLLAQCLYEFAWNEFCDWFLELSKP-ALNGADA 724

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +  +  + V+  L  LL    P +  +++  L
Sbjct: 725 ADAESTRHTLLYVLEALLRLLHPLTPFITEQLWQQL 760



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 24/139 (17%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A------------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRH 102
                                    +  Q      R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDSLGREGFIGKVWEWKQQSGDIIERQMRRLGTSADWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYK 121
                  + +  ++G IY+
Sbjct: 152 SAAVNEAFVRWYEQGLIYR 170


>gi|325127472|gb|EGC50401.1| leucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 876

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKHNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 747 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|167551269|ref|ZP_02345024.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205323943|gb|EDZ11782.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 951

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 135/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEEEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  R+ + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYRDALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +           V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRNTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 23/172 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
              +  + ++ ++  +  IY+G     +  +     +D EV           
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWH 199


>gi|78048494|ref|YP_364669.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78036924|emb|CAJ24617.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 932

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 86  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 145

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 146 AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 205

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 206 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 261

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 262 LDQLDGWPDSVKTMQRNWIGRSEGL 286



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 76/196 (38%), Gaps = 27/196 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+    R    L   +
Sbjct: 689 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGVDGMARFMRRLWVQV 748

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQV 417
              V    ++ L             +   ++I       + ++ ++   +   + A+A V
Sbjct: 749 HKHVGEGAAVAL--------DVAVLSAEQKAIRRKTHETIGKVSDDYGRRHSFNTAIAAV 800

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + + ++ DA           ++   V     E +  + +LL    P  ++ ++ +L
Sbjct: 801 MELSNALAKFDDAS----------EQGRAVRQ---EALEAMVLLLNPITPHASHALWQVL 847

Query: 478 FVAD---ENRCFQSLD 490
              +   EN  F   D
Sbjct: 848 GRGETLLENVAFPQAD 863


>gi|88859089|ref|ZP_01133730.1| valine tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819315|gb|EAR29129.1| valine tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 948

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/356 (19%), Positives = 117/356 (32%), Gaps = 53/356 (14%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S   D           +   I    +    V  G  +  + R        +    + ++
Sbjct: 411 NSWMNDIQDWCISRQLWWGHRIPAWYDAQGNVFVGRDEAEVRRDNNIAADTVLTQDEDVL 470

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------ 282
             W  +     +T G+  N D  K    P+D+ V G DI+ F         L        
Sbjct: 471 DTWFSSALWTFSTQGWPANTDDLKTFH-PSDVLVTGFDIIFFWVARMIMMTLHFIKDENG 529

Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-------------------- 320
              +P      +       G+K+SKS GNV+DPI++I+ +                    
Sbjct: 530 KPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAK 589

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ L    + G+D  +D + L      +  N + N  S
Sbjct: 590 KIEQNTRKTFTDGIEAHGTDALRFTLAAMASTGRDINWDMNRLDG--YRNFCNKLWN-AS 646

Query: 364 RSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           R V M  ++ D         ++ +D  IL       +   E++ N     A + V     
Sbjct: 647 RYVLMNTEEKDCGFNGGTMEYSLADRWILGQFQTTTKIFTEHLDNYRFDLAASTVYEFTW 706

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP  L K   +      +V V V+  L  L+   +P +   I+  
Sbjct: 707 NQFCDWYLELTKP-ILFKGTENEQRGTRHVLVTVLEGLLRLMHPLMPYITETIWQR 761



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 21/167 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L RF R+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQDTIMDTLTRFKRMQGNNTLWQVGTDHAGIATQMVVERKLAAE 95

Query: 70  KVFVDQ---NSRNFRDMADVLD----------------ISYDDFIRTTEKRHHDTCRILW 110
           +               +    +                + +D    T ++   +  + ++
Sbjct: 96  ENKTRHDLGRDAFIDKIWQWKNESGGTITKQLRRLGASVDWDRERFTMDEGLSEAVKEVF 155

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  +  IY+G     +  +     +D EV       +      P+
Sbjct: 156 VRLHKEDLIYRGKRLVNWDPKLHTAISDLEVENKDKQGHMWHLRYPL 202


>gi|56460055|ref|YP_155336.1| leucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|60390666|sp|Q5QYD1|SYL_IDILO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56179065|gb|AAV81787.1| Leucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 858

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y  +   YP+ + H+GH     + DV++R  R+ G +V+   G D  G     AA
Sbjct: 31  GKDKFYCLSMFPYPSGKLHMGHVRNYTLGDVISRHQRMLGKNVMQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  QN    R+    L   YD    + T    ++   +  + K+ +KG +Y
Sbjct: 91  IQNKTAPAKWTYQNIDYMREQLKSLGFGYDWNRELATCSPDYYRWEQWFFTKLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNATVNWDPVDQTVLANEQVIDG----RGWRSGAKVEQKEIPQWFIKITDYAEELLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DQLDGWPEQVKAMQRNWIGRSEG 229



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 77/195 (39%), Gaps = 26/195 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E  G D +R F++          +   G++         G   
Sbjct: 618 SKMSKSKNNGIDPQTMVERYGADTVRLFMMFAAPPEMTLEWSDSGVE---------GAQR 668

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            + R   +  + +  G   +  +   + + +     + + ++ ++M + Q  + A+A ++
Sbjct: 669 FLRRLWKLTYELNNAGGACSGQSLNANQKQLRRELHKTIAKVSDDMGRRQHFNTAIAAIM 728

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++ + +      P E   +  DR      V  E I     +L    P +  +++  L 
Sbjct: 729 ELLNHLQK-----APLE---SEADR-----QVLAESIDATVRMLAPITPHICEQLWQELG 775

Query: 479 VAD--ENRCFQSLDQ 491
             +      + ++D+
Sbjct: 776 HQEPLSFADWPAVDE 790


>gi|307248544|ref|ZP_07530560.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306854939|gb|EFM87126.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 948

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEAGNVYVARNEEEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 ENGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 610 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGK 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   RE +       A   +         D Y +  KP     
Sbjct: 665 VEYSLADRWIESTFNRTVGTFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKPVFANG 724

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 725 TDAQKRGA-SQTLVRVLEKLLRLAHPIMPFITEEIWQ 760



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|302390181|ref|YP_003826002.1| Isoleucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200809|gb|ADL08379.1| Isoleucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 1045

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/455 (15%), Positives = 148/455 (32%), Gaps = 26/455 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDF 94
           +       +      D  G+   +    AG    VFV    +          + Y  + +
Sbjct: 327 YRTGQKHGLPVLQPVDAQGRFTEQVESWAG----VFVKDADKGIIKDLKQRGLLYKAERY 382

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           + T                  +   +    +    L +             DG++ N   
Sbjct: 383 LHT---YPFCWRCDTPLLYYARSSWFIKTTAIKDRLLEINRKIGWHPEHIRDGRFGNFLE 439

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           N + W        R   +   L  +          +    E+ +  K  L D+ L +   
Sbjct: 440 NVIDWC-----LSRERYWGTPLNIWICQECGKEHAVGSIEELKAMSKLPLGDIELHKPYV 494

Query: 215 DWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           D  +               ++  W D+ +       Y    + +    +PAD      D 
Sbjct: 495 DEVVLKCPGCGGDMRRVPEVIDCWFDSGSMPFAQLHYPFENEETFKTHFPADFISEAIDQ 554

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F++++  + LL  + P    +     +   G+K+SK  GNV+DP E++ E G DA+
Sbjct: 555 TRGWFYSLFVISTLLFDDSPYKNVLVMGHVLDQYGQKMSKHKGNVLDPWEILNEQGADAM 614

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAF 383
           R++L           + K+ + +     L          ++   + ++D       P + 
Sbjct: 615 RWYLYVASPPWNPSRFYKEAVSEAQRRFLGTLWNIYSFFTLYASIDNFDPRKHSLDPKSR 674

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E D  +LS  +   + +R+ +    I  A   +  LV ++  ++  +      K+  D+
Sbjct: 675 HEMDRWLLSRVNSTNRRVRKCLDGFDITTAARALEELVDDMSNWYVRRCRERFWKSEMDQ 734

Query: 444 AS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                     E + +   +   FVP +  +++  L
Sbjct: 735 DKIAAYLTLYEALVEFIKIAAPFVPFITEELYQNL 769



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
           K+             N +PH GH    ++ D++ R+  + G  V    G D HG  +   
Sbjct: 36  KDAPNYVFYEGPPTANGKPHAGHVLTRVVKDLIPRYKTMMGYRVDRKAGWDTHGLPVELE 95

Query: 61  ---------AAQNAGVTTKVFVDQ-------NSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                      Q      + F+ +         + ++ M + +   I  ++   T    +
Sbjct: 96  VEKQLGISGKPQIEEYGVEEFIKKCKNSVFTYEQEWKRMTERVGFWIDMENPYVTYHNTY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     KKI +KG +YKG     Y  R     +  EV +G D
Sbjct: 156 IESVWWALKKIWEKGLLYKGHKVVPYCPRCGTSLSSHEVAQGYD 199


>gi|221134245|ref|ZP_03560550.1| leucyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 860

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV++R  R+ G +VL   G D  G     AA
Sbjct: 32  SREKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRHQRMLGKNVLQPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N    +   + L   YD      T +  ++   +  + ++ +KG +Y
Sbjct: 92  INNNTAPAKWTYSNIEYMKGQLNSLGFGYDWEREFATCQPDYYRWEQWFFTRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y  KLL   
Sbjct: 152 KKLSTVNWDPIDQTVLANEQVIDG----RGWRSGAIVEQKEIPQWFIKITDYAQKLLDDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++   +       G
Sbjct: 208 DQLDQWPEQVKTMQKNWIGRSEG 230



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 123/324 (37%), Gaps = 37/324 (11%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +ME   Y+ R ++  +  +        ++   +    +   +   L      +   D G+
Sbjct: 494 FMESSWYYARYTSQTNNAMLDPSEANYWLPVDQYVGGIEHAILHLLYSRFFHKLLRDEGL 553

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
              D+P   +      L      + Y ++  G K  + PAD+ V   D  R +A    A 
Sbjct: 554 VDSDEPYKRLLCQGMVL----ADSFYREDESGKKTWYSPADVTVTKDDKGRINAAILDAD 609

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                     +   HG +     K+SKS  N IDP +VI+  G D +R F +      + 
Sbjct: 610 ---------GEPVIHGGMT----KMSKSKNNGIDPQQVIDLYGADTVRLFTMFAAPPEQT 656

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +   G++       AN     V + V+  +        TP   T+S + +  +  + +
Sbjct: 657 LEWVDSGVEG------ANRFLKRVWKLVNEHIALGATEALTPETLTKSQQDLRRLVHQTI 710

Query: 399 QEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            ++ ++++ +   + A+A ++ L + + +      P        DRA     +  E +  
Sbjct: 711 AKVSDDIERRQTFNTAIAAIMELCNHLQK-----AP---SDNAQDRA-----ILQEGVEA 757

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           + ++L    P + ++++  L   D
Sbjct: 758 VVLMLTPITPHICHELWTALGHTD 781


>gi|73985819|ref|XP_533856.2| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           isoform 1 [Canis familiaris]
          Length = 903

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N  + R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIEHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIKGMQAHWIGDC 276



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 102/318 (32%), Gaps = 63/318 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        +   D              Y          + + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAARRETDTMDTFVDSAWYYFRYTDPQNTHSPFNTALADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDQKMVRHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     +     EK+SKS  N +DP EV+ + G+D +R +++      KD  +D  
Sbjct: 622 SVPVHSETKEQLEVTWEKMSKSKHNGVDPEEVVGQFGIDTIRLYILFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L +     I     GM+P P      + +         + V+ E
Sbjct: 680 -VKTDALPGVLRWQQRLWTLVTRFIEARASGMVPRPELLRNEERAESKKLWEYKNAVISE 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +  ++  ++ A+AQ++ L S +     A +   L     + A          +  L 
Sbjct: 739 VTGHFTEDFSLNSAIAQLMGLSSNL---LQASQRVVLHSPEFEDA----------LCALV 785

Query: 460 ILLQAFVPKLANKIFDIL 477
           ++     P + ++++  L
Sbjct: 786 VMAAPMAPHITSELWAGL 803


>gi|255322301|ref|ZP_05363447.1| valyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300674|gb|EET79945.1| valyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 875

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 80/401 (19%), Positives = 146/401 (36%), Gaps = 63/401 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + + F      D  ++          P    N   +     L+D  
Sbjct: 345 YCYRCKNVVEPYISKQW-FVKKQIADDAIAKVGEGLAKFYPAHWIN-SFNAWMRELRDWC 402

Query: 209 LSRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYL 239
           +SR+   WG +I                               DP  ++  W  +     
Sbjct: 403 ISRQ-LWWGHQIPVFYCNECGHEWVDEGEPTQCPKCKSANFHQDPD-VLDTWFSSGLWPF 460

Query: 240 TTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
           +T G+ +          +G  A+F+P +L + G DIL F    + +        LP    
Sbjct: 461 STLGWGNGEELKNEKWFEGDLAEFYPNNLLITGFDILFFWVARMMFQGENALGKLPFDDI 520

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                    +G K+SKSLGNVIDP+  IEE   D LR+ L      G+D     + +K  
Sbjct: 521 YLHALVKDEQGRKMSKSLGNVIDPLVSIEEYSADILRFTLALLAVQGRDIKLSDEKMK-- 578

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQN 407
               L     N +  +   +L +         A   T+  + +LS  +  ++E+REN+  
Sbjct: 579 ----LVRNFTNKLYNASKYLLLNESKFANLSDAKIETKLGKYMLSRFNECVREVRENIDA 634

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A   +   +       D    W ++ +  D+  +V  +   + ++   LL  F+P
Sbjct: 635 YRFNDAANAIYKFLW------DEFCDWGIELSKADK-GSVKELGA-IFKEAMRLLSPFMP 686

Query: 468 KLANKIFDILFVAD-ENRCFQSLDQRLKPG---FMLHKTFD 504
            ++  +F  L  ++ EN     +++  +       + KTF+
Sbjct: 687 FISEYLFHELSGSNLENASSIMVEEYPQANERDLQIEKTFE 727



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K  I           HIGHA    + D++ R+ R+DG   L+  G D  G      
Sbjct: 34  KDGRKFCIMMPPPNVTGSLHIGHALTFTLQDIMTRYKRMDGYKTLWQPGLDHAGIATQNV 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++          L IS  +     T ++   
Sbjct: 94  VEKQLLAQGIKKEELGREKFVEKVWEWKEKSGGMIVHQMRKLGISPAWSRQRFTMDEGLR 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
              +  +  + +KG I +  Y   +   D A  + +  +K   G+ Y+ ++
Sbjct: 154 IAVKKAFVNLYEKGLIVRENYMINWCTHDGALSDIEVEHKENKGKLYHLRY 204


>gi|40063251|gb|AAR38078.1| leucyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 873

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 6/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ ++K +  +   YP+ + H+GH     I D+L+R+HR+ G +VL   G D  G     
Sbjct: 29  VQGKKKYFCLSMFPYPSGKLHMGHVRNYTIGDLLSRYHRMQGYNVLQPMGWDAFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    +   N    R     L   I +D    T ++ ++   + L+ ++ +KG 
Sbjct: 89  AAIQNKVPPAEWTYDNINYMRKQLKSLGLAIDWDREFATCDQDYYRWNQWLFLRMLEKGI 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +   D+    +++V  G            ++  E  GY+  ++ Y ++LL+
Sbjct: 149 AYKKTQVVNWDPVDQTVLANEQVIDG----RGWRTGALIERREIPGYYLGITQYAEELLN 204

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             +    +   ++           G
Sbjct: 205 GLDKLSGWPDRVKTMQANWIGKSFG 229



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 121/372 (32%), Gaps = 41/372 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           S     +  ++YN D    G   +      +   +++   Y+ R +              
Sbjct: 475 SCNPLEKMSSFYNCDCPKCGRTARRETDTMD--TFVDSSWYYIRYTCTDQNKSMTDSRTN 532

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   + G+   D+P   +      L         
Sbjct: 533 YWLPVDQYIGGIEHAILHLLYSRFWTKVMHNLGLVEFDEPFSDLLTQGMVLNEIFFRKEE 592

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                       PAD+ +   D  +                    V   G        +S
Sbjct: 593 TGRITYFN----PADVDIQTDDQGKRSNAILREDNNP--------VEFGGVGT-----MS 635

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP +++++ G D  R F++      +   +   G          N + N V R
Sbjct: 636 KSKNNGVDPQKLVDKYGADTARLFIMFASPPEQTLEWTDTGADGAFR--FLNRLWNQVYR 693

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSE 423
            +   + + +      G  +   +S        + ++ +++  +   + A+A V+ L++ 
Sbjct: 694 HLQFGIVEPEIS----GNLSAELKSFRFQLHHTISKVSDDLGRRHTFNTAIAAVMELMNS 749

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE- 482
           + +         +  ++    S +     E +  + +LL   VP + + ++  L    E 
Sbjct: 750 LTK---------IHGSDKSSRSVIQ----EALENIVLLLSPIVPHICHTLWRELRPETEL 796

Query: 483 -NRCFQSLDQRL 493
            ++ +   D+++
Sbjct: 797 LDQPWPEADKKI 808


>gi|163757458|ref|ZP_02164547.1| leucyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284960|gb|EDQ35242.1| leucyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 876

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 75/207 (36%), Gaps = 6/207 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA  
Sbjct: 34  PKYYVLEMFPYPSGRIHMGHVRNYALGDVVARYKRARGFNVLHPMGWDAFGMPAENAAMQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V  + +   N    R     + +S D      T +  ++   + L+      G IY+ 
Sbjct: 94  NKVHPREWTYANIDAMRKQLKSMGLSLDWSREFATCDVDYYKQQQALFLDFLAAGLIYRR 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     +++V  G            V+  E   +FFR+S + + LL   + 
Sbjct: 154 NSKVNWDPVDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFRISDFAEDLLQSLDG 209

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSL 209
             ++   +    +       GL     
Sbjct: 210 LDQWPEKVRLMQKNWIGKSEGLSLRWQ 236



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 16/179 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I+  G D  R+F++ +    +D  + + G++          I  
Sbjct: 631 EKMSKSKKNVVDPDDIIDGYGADTARFFMLSDSPPDRDVIWSEAGVEGAHR--FVQKIWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L+  + S  LK  +          E   +      + ++ + E+++    ++A+A++  L
Sbjct: 689 LIGEA-SENLKSAEAAAGAESRALEVSRA----SHKTVKAVGEDIEKLAFNKAVARLYEL 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+          P  L      +A  V      +    L  L    +P LA + + +L 
Sbjct: 744 VN------TLAGP--LSDVAAGKADEVLTSACKQAASHLVQLFAPMMPHLAEECWILLG 794


>gi|282859464|ref|ZP_06268569.1| valine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587692|gb|EFB92892.1| valine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 898

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 138/403 (34%), Gaps = 59/403 (14%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    + P++      +F ++  + D  L+          P + +N 
Sbjct: 348 LMEKVEDYDNKVGYSERTNVPIEPKLSTQWFLKMQHFADIALAPVMDDDIEFYPKKYKNT 407

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 408 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFKDAEGKPATVVAENDAEALKLAQAVNASVI 465

Query: 222 ----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIY 274
               +     +  W  +    ++    ++NPD  +   ++P    V G DI+ F    + 
Sbjct: 466 AADLEQESDCLDTWFSSWLWPISVFDGVNNPDNEEINYYYPTSDLVTGPDIIFFWVARMI 525

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
              +      P     F+      +G K+SKSLGN  DP+E+IE+ G D +R  ++    
Sbjct: 526 MAGYEYRGKFPFKHVYFTGIVRDKQGRKMSKSLGNSPDPLELIEKFGADGVRMGMMLAAP 585

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +D+   ++  N        N +  +  ++       +  P A   +     +  
Sbjct: 586 AGNDILFDEALCEQGRN------FNNKIWNAFRLVQGWETADLEQPEASKIAVSWFDAKL 639

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             V  E+++  ++  I  AL  V  L      ++D    W L+   P+    +   T E 
Sbjct: 640 KAVNVEMQQQFKDYRISEALMTVYKL------FWDEFSSWYLEMIKPEYGKPIDKATYEA 693

Query: 455 ----IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                  L  +L  F+P +  +++  L+   +      ++ ++
Sbjct: 694 TLAFFDNLLKMLHPFMPFITEELWQHLYEHKDGESIMRIELKI 736



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++   +
Sbjct: 92  VNRLAQQGIKKTDLSREDFLKHAWDWTNEHGGIILKQLRKLGCSCDWDRTAFTMDEVRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               ++  +  KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 GVIKVFCDLYKKGLIYRGVRMVNWDPQAKTALSDEEVIYKEEH 194


>gi|295691571|ref|YP_003595264.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295433474|gb|ADG12646.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 861

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  GRPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N    R+    L IS D      T +  ++   +  + ++  +G +Y
Sbjct: 91  MERGVHPKGWTYDNIAAMREQLKALGISIDWSREFATCDPEYYGKQQAWFLRLLKRGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   S  +   D     +++V  G   +        V+  +   +F R++ Y D L+   
Sbjct: 151 RKEASVNWDPVDMTVLANEQVIDGKGWRSGAT----VEKRKLTQWFLRITDYADALIDGL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++   +   +    E       GL
Sbjct: 207 KTLDRWPDKVRLMQENWIGRSKGL 230



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 31/183 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P ++ E  GVDA R F++ +    +D  +   G++             
Sbjct: 622 EKMSKSKKNVVAPEDIFEAYGVDAARLFVMSDSPPERDVQWTNAGVEGSW---------- 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
              R    +  ++D       A  +SDE+ L++     +++  + ++++    +  +A++
Sbjct: 672 ---RFTHRLWNEFDSQPAGDFAHDDSDEAALALRKAAHKLIGFVTDSIEGFRFNSGVARL 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              ++ +             K  P   +   VL    E +  LA L+  F P LA + + 
Sbjct: 729 YEFLNAL-------------KAAPAEGASNAVLAARAEALNILARLVAPFTPHLAEEAWA 775

Query: 476 ILF 478
            + 
Sbjct: 776 KIG 778


>gi|298481493|ref|ZP_06999685.1| valine--tRNA ligase [Bacteroides sp. D22]
 gi|298272357|gb|EFI13926.1| valine--tRNA ligase [Bacteroides sp. D22]
          Length = 878

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 126/366 (34%), Gaps = 59/366 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAALTMEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             N +  +  +I    +G   IP P     + +           E+ +      +  AL 
Sbjct: 584 FCNKIWNAFRLIKGWTNGKGSIPVPPEAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALM 643

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P         +  + +    +L  LL  F+P +  
Sbjct: 644 LVYKL------FWDEFSSWLLEIVKPAYGQPINGFIYSMVLSSFERLLELLHPFMPFITE 697

Query: 472 KIFDIL 477
           +++  L
Sbjct: 698 ELWQQL 703



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLASQGIKKTDLSRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + DKG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLFDKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|295086956|emb|CBK68479.1| valyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 878

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 126/366 (34%), Gaps = 59/366 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAALTMEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             N +  +  +I    +G   IP P     + +           E+ +      +  AL 
Sbjct: 584 FCNKIWNAFRLIKGWTNGKGSIPVPPEAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALM 643

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P         +  + +    +L  LL  F+P +  
Sbjct: 644 LVYKL------FWDEFSSWLLEIVKPAYGQPINGFIYSMVLSSFERLLELLHPFMPFITE 697

Query: 472 KIFDIL 477
           +++  L
Sbjct: 698 ELWQQL 703



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLASQGIKKTDLSRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + DKG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLFDKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|224373503|ref|YP_002607875.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588740|gb|ACM92476.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 819

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 6/197 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA  
Sbjct: 32  PKKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKKGFNVLHPIGWDSFGMPAENAAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                K +  +N    R     L +S+  +    T++  +    +    K+ + G + + 
Sbjct: 92  NKTHPKKWTYENIDYMRKELKNLGLSFSKEREFATSDPDYTRWEQEFIIKMYENGLLERR 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V  G          NP++  E  G++ +++ Y D+LL   ++
Sbjct: 152 TQKVNWCETCHTVLANEQVIDG----CCWRCDNPIEIKELPGWYIKITKYADELLEDIDT 207

Query: 183 HPEFILPIERRNEVISF 199
             +   P        ++
Sbjct: 208 KLKGNWPDRVLTMQKNW 224



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 98/279 (35%), Gaps = 35/279 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------ 278
           ++   W                      K++ P D ++ G +    H +Y   F      
Sbjct: 503 FVQSSWYQFRFTTDFHKYTDVPFRKEDVKYFAPVDQYIGGIEHAILHLLYARFFTKALRD 562

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L  + P  KK+ + G +L  G K+SKS GNV+DP E++ + G D  R F++      
Sbjct: 563 LGYLELDEPF-KKLLTQGMVLKDGSKMSKSKGNVVDPDEIVAKYGADTARLFILFAAPPE 621

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           ++  +    ++       A    N +  +     K            ++ ++        
Sbjct: 622 QELEWSDSAVEG------AFRFINRLYLNAEKAYKTDTMPKIDTSKLSKEEKEARRKVYE 675

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            L+   E  +     +  +A  +  ++ +++             N D       +  E  
Sbjct: 676 TLKRSEETYEKTFAFNTLIASAMEALNALNK-----------INNKD-------LFTEGY 717

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             +  +L+  +P + +++ + LF  +     +  ++ LK
Sbjct: 718 WIILNVLEPIIPHVTSELSEELFGRNNFASIKVDEEALK 756


>gi|161611254|ref|YP_297039.2| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|189083223|sp|Q46XD8|SYL_RALEJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 873

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 36  KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y ++LL  
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAIVEKREIPMYYLRITDYAEELLGD 211

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 212 LDGLGWPERVKIMQQNWI 229



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 117/358 (32%), Gaps = 44/358 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 TGNPLNKDPRFLQCSCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAATMVD-ARND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETFY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D             + A L    +    G +    EK+S
Sbjct: 592 REDAAGKKTWYNPADVDVQTDD---------RGRPVGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F++      +   +   G++    +     + N    
Sbjct: 639 KSKNNGIDPQALIDQHGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWNYGFA 696

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           + + +            A T  D  +      VL++   + Q    +  ++  + +++ +
Sbjct: 697 NAAAVRDGAG------AAPTADDADLRREIHGVLKQANYDYQRIQYNTVVSATMKMLNAL 750

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                            D  +       E    L  +L   VP + + ++D L  A +
Sbjct: 751 ----------------EDAKNASPVARRECFGILLRVLYPVVPHITHGLWDALGYATQ 792


>gi|67922684|ref|ZP_00516188.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
 gi|67855466|gb|EAM50721.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
          Length = 853

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     A
Sbjct: 30  SDKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  +    +  QN    R     L   I +D  + T    ++   + L+ +    G  
Sbjct: 90  AIDRNIPPADWTKQNIAQMRQQLQTLGLSIDWDREVATCFPDYYKWTQWLFLQFYQSGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ++G  + +    V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV--DSEGYSWRSGAK-VERKLLRQWFLKITDYAEQLLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 207 LDKLSGWPDRVKLMQENWIGKSVG 230



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 30/195 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  V+ + G D  R F++ +    KD  +D   ++         G   
Sbjct: 614 EKMSKSKYNGVDPKTVLGKYGADTARMFILFKAPPEKDLEWDDADVE---------GQFR 664

Query: 361 LVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
            ++R   ++    +      +    ++ ++ +       ++EI E+++ +   + A++++
Sbjct: 665 FLNRVWRLVNGYAEKQPEVISNKELSKEEKGLRRAIHTAIKEISEDLEGDYQFNTAVSEL 724

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + ++                D  S    V  E I  L ILL  F P +A +++  L
Sbjct: 725 MKLSNTLN----------------DAKSINSGVYQEGIGILLILLAPFAPHIAEELWHNL 768

Query: 478 FVADEN--RCFQSLD 490
              +    + +  +D
Sbjct: 769 GHENSIHLQTWPEVD 783


>gi|163851006|ref|YP_001639049.1| leucyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163662611|gb|ABY29978.1| leucyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 901

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 74/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 72  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 131

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N    R     + +S D    I T +  ++   + ++     KG + +
Sbjct: 132 ERKVNPREWTYANIATMRGQLQSMGLSLDWSREIATCDPDYYKHQQRMFLDFLGKGLVTR 191

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   L    +
Sbjct: 192 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLHDALD 247

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
               +   +            GL+  
Sbjct: 248 GLERWPEKVRLMQRNWIGRSEGLEVR 273



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 74/195 (37%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP +++   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 669 EKMSKSKKNVVDPDDIMASYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAAR 719

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   ++        P   A    D  +     + L  + E+++    +R +A + +L
Sbjct: 720 FVQRVWRLVHGATAANGPGGTA----DAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 775

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +D                 R         E  R L  L+   +P LA + + +L   
Sbjct: 776 ANALD--------------EGLRGGASKAAAGEAARILVQLIAPMMPHLAEESWRVLGGE 821

Query: 481 D--ENRCFQSLDQRL 493
                  +   DQ L
Sbjct: 822 GLVAETAWPVADQAL 836


>gi|254976114|ref|ZP_05272586.1| leucyl-tRNA synthetase [Clostridium difficile QCD-66c26]
          Length = 780

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  TEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N    ++  ++L ISY  D  + T+   ++   + ++ K  + G  
Sbjct: 90  AIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V +GA           V   + E ++F+ + + ++LL+ 
Sbjct: 150 YKKKSYVNWCPSCETVLANEQVVQGA----CERCKATVLKKDLEQWYFKTTEFAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +      +G
Sbjct: 206 LDTLDGWPEKVKTMQKNWIGKSTG 229



 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 133/414 (32%), Gaps = 45/414 (10%)

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
           +    RD A+  ++   D I    + +       +  +                 R +  
Sbjct: 344 HDERDRDFAEKYNLDIIDVI---TEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRT 400

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
            N          Q Y     PV + +E G           LL                ++
Sbjct: 401 INYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSK 460

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                          R+          D              Y+ +    +         
Sbjct: 461 QFMSTTCPHCGKPARRE---------VDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNR 511

Query: 256 W-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D ++ G +    H +Y   F        ++  N P  K + + G +L  G K+SKS
Sbjct: 512 WHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPF-KNLLTQGMVLMDGSKMSKS 570

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN + P+++I+E G D  R F++      +D  + + G+         N +  LV    
Sbjct: 571 KGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFR--FLNRVYRLVDELA 628

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
            ++ KD +      G     D+ +       L+++  ++ +    + A++ ++ L++++ 
Sbjct: 629 DVVKKDVEF-----GELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMY 683

Query: 426 RYFDAQKPWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +Y                   +   V  E ++ +  ++  F P L  +++ ++ 
Sbjct: 684 KY--------------KELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIG 723


>gi|261856331|ref|YP_003263614.1| leucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836800|gb|ACX96567.1| leucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 818

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 32  TREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRGKNVLQPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N    R     L ++YD    + T    ++   + L+ ++  KG  Y
Sbjct: 92  LKNGDAPARWTFENIDYMRGQLQRLGLAYDWQRELATCTPEYYRWEQWLFTRLVRKGMAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D     +++V  G            V+  E   +F +++ Y D+L+   
Sbjct: 152 KKTAVVNWDPVDMTVLANEQVIDG----RGWRSGALVERREIPQWFIKITNYADELIDDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
                +   +            GL+
Sbjct: 208 NQLDGWPEQVRTMQANWIGRSRGLQ 232



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 93/264 (35%), Gaps = 31/264 (11%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-- 282
              + ++   Y   T   +       +A +W P D +V G +    H +Y   F      
Sbjct: 490 FDTFFESSWYYARYTCPDFAQGMLDDRADYWLPVDQYVGGVEHAVLHLLYARFFHKLMRD 549

Query: 283 -------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                        ++ + G +   G K+SKS GN +DP  +IEE G D +R F++     
Sbjct: 550 EGLIAKDKPEPFTRLLTQGMVNKDGSKMSKSKGNTVDPQPLIEEYGADTVRLFMMFAAPP 609

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +   +   G+           +  L  +        +           ++  ++     
Sbjct: 610 DQGLEWSDAGVDGAH-----RFLKRLWRQVYDRKQAGWQPSTLLIEGLDDAGRALRRKLH 664

Query: 396 RVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +  + ++++ +   +  +A  + L +E++R+                      V  EV
Sbjct: 665 ETIARVTDDVEKRQTFNTVIAANMELFNELNRF-------------EGSDQVANGVITEV 711

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           ++ +  +L   VP +A+ ++  + 
Sbjct: 712 LQSMIKMLSPIVPHIAHALWSQVG 735


>gi|121606674|ref|YP_984003.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166231627|sp|A1VTV4|SYL_POLNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120595643|gb|ABM39082.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 888

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 7/235 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I D+L+R+ R+ G +VL   G D  G     AA
Sbjct: 31  SRKKYYACSMLPYPSGKLHMGHVRNYTINDMLSRYLRMKGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     + ++ D    I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNGVPPAQWTYDNIAYMKKQMQAMGLAVDWSREIATCDPSYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+ +++ Y ++LL   
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDGKG----WRTGATVEKREIPGYYLKITDYAEELLGSV 206

Query: 181 ESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           +   P +   ++   E       G++   L       G  I D   Y+     D 
Sbjct: 207 QHKLPGWPERVKLMQENWIGKSEGVRFAFLHDIKDASGALIGDGQMYVFTTRADT 261



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 105/344 (30%), Gaps = 32/344 (9%)

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
           G        P +   +    F  S++        ++    +         +     G++ 
Sbjct: 488 GVVCPVCGKPARRETDTMDTFVDSSWYFMRYCDPKNSEAMVAGGADYWMPMDQYIGGIEH 547

Query: 207 LSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHV 262
             L      +  K+  D   + +      L        ++ +    K     FWP D+  
Sbjct: 548 AILHLLYARFWTKVMRDLGLVKVDEPFTKLLTQGMVLNHIYSRRTDKGGKEYFWPHDVEH 607

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKV---FSHGFILHKG-EKISKSLGNVIDPIEVIE 318
           +  D               A   L   V        I ++G   +SKS  N +DP ++IE
Sbjct: 608 VLDD-----------TGKIAGARLKNAVGDLPVGTAIDYEGVGTMSKSKNNGVDPQDIIE 656

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D  R + +          ++  G++      L       V  +      +      
Sbjct: 657 KYGADTARLYTMFTAPPEATLEWNDAGVEGSY-RFLRRVWNFGVKLNAMNSGANGADAAC 715

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
             G F +  +++      +L+++  + Q    +  ++  + L++             L+ 
Sbjct: 716 AKGLFDKETKALRLEVHTLLKQVDYDYQRMQYNTVVSGGMKLLNA------------LED 763

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + ++  L    E    L   L    P L + ++  L  A E
Sbjct: 764 FKGEISAASLAALREGFSVLLRCLYPAAPHLTHALWSELGYAAE 807


>gi|161870889|ref|YP_001600063.1| valyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161596442|gb|ABX74102.1| valyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 945

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDNEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 DRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|146284080|ref|YP_001174233.1| leucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145572285|gb|ABP81391.1| leucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 906

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 69  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAA 128

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 129 MKNQVAPAKWTYENIAYMKAQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 188

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 189 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 244

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 245 DELDGWPEQVKTMQRNWIGKSRGM 268



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 111/393 (28%), Gaps = 89/393 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 463 WGISRQRYWGCPIPIIHCDSCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 517

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  +        K   D              Y +        D   A  W P D +
Sbjct: 518 -----ECTCPKCGAPAKRETDTMDTFVESSWYFARYASPNYDKGMVDPQAANHWLPVDQY 572

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLPKKVF-------SHGFILHKG------ 300
           + G +    H +Y   F            N P    +        ++   L  G      
Sbjct: 573 IGGIEHAILHLLYARFFHKLMRDEGLVSSNEPFKNLLTQGMVVAETYYRTLENGGKDWFN 632

Query: 301 -------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                          EK+SKS  N +DP  +I+  G D  R F+
Sbjct: 633 PADVEVERDAKAKVIGARLKTDGLPVEIGGTEKMSKSKNNGVDPQAMIDAYGADTCRLFM 692

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++         G    + R   +        +P      A  + 
Sbjct: 693 MFASPPDMSLEWSDSGVE---------GASRFLRRVWRLAHAHVSAGLPGALDVAALNDE 743

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++       +++   ++ Q+   + A+AQV++L++ +      + P        DRA 
Sbjct: 744 QKAVRRAIHLAIKQASTDVGQHHKFNTAIAQVMTLMNVL-----EKAP---TAGEQDRA- 794

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               +  E +  +A+LL    P + ++++  L 
Sbjct: 795 ----LLQEGLETVALLLAPITPHICHELWQQLG 823


>gi|40788954|dbj|BAA04877.2| KIAA0028 [Homo sapiens]
          Length = 904

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 80  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 139

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 140 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 199

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 200 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 256

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 257 LADLPEWYGIKGMQAHWIGDC 277



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 108/329 (32%), Gaps = 69/329 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          + + A +W P DL++ GK
Sbjct: 503 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGK 562

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 563 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 622

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 623 SVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-- 680

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   +  +++         + V+ +
Sbjct: 681 -VKTDALPGVLRWQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQ 739

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE---VIR 456
           +  +  ++  ++ A++Q++ L + + +                 + +V+  + E    + 
Sbjct: 740 VTTHFTEDFSLNSAISQLMGLSNALSQ----------------ASQSVILHSPEFEDALC 783

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++I+  L +     C
Sbjct: 784 ALMVMAAPLAPHVTSEIWAGLALVPRKLC 812


>gi|7661872|ref|NP_056155.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|2501029|sp|Q15031|SYLM_HUMAN RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|19683964|gb|AAH25989.1| Leucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119585144|gb|EAW64740.1| leucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|124126795|gb|ABM92170.1| leucyl-tRNA synthetase 2, mitochondrial [synthetic construct]
 gi|157928010|gb|ABW03301.1| leucyl-tRNA synthetase 2, mitochondrial [synthetic construct]
 gi|168274302|dbj|BAG09571.1| leucyl-tRNA synthetase [synthetic construct]
          Length = 903

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIKGMQAHWIGDC 276



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 108/329 (32%), Gaps = 69/329 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          + + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 622 SVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   +  +++         + V+ +
Sbjct: 680 -VKTDALPGVLRWQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE---VIR 456
           +  +  ++  ++ A++Q++ L + + +                 + +V+  + E    + 
Sbjct: 739 VTTHFTEDFSLNSAISQLMGLSNALSQ----------------ASQSVILHSPEFEDALC 782

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++I+  L +     C
Sbjct: 783 ALMVMAAPLAPHVTSEIWAGLALVPRKLC 811


>gi|315931151|gb|EFV10124.1| Methionine-tRNA ligase [Campylobacter jejuni subsp. jejuni 327]
          Length = 187

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           Y +  E+++   ++               +   +EE YFF+LS YQDK+L +YE     +
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKNTTIL---KEESYFFKLSKYQDKILQWYEEKDPIL 179

Query: 188 LPIERRN 194
              ++ N
Sbjct: 180 PKNKKTN 186


>gi|304413755|ref|ZP_07395199.1| valyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283846|gb|EFL92240.1| valyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 959

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 132/399 (33%), Gaps = 86/399 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ R +      ++  E+     +P +  N   S+    ++D  +SR+   W
Sbjct: 381 IEPLLTDQWYVRTAPLAKAAIAAVENGEIQFVPKQYENMYYSW-MHDIQDWCISRQ-LWW 438

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I +  DP                              ++  W  +     +T G+ +
Sbjct: 439 GHRIPVWYDPHGKVYVGRDETAVRLEYQLTDDVPLRQDDDVLDTWFSSGLWTFSTLGWPE 498

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                K    P  + V G DI+ F         L         A +P      +      
Sbjct: 499 QTADLKMFH-PTTVMVSGFDIIFFWIARMIMLTLHFIKDDSGKAQVPFKTVYMTGLIRDD 557

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 558 EGQKMSKSKGNVLDPLDMIDGISLADLLAKRTDNMMQPQLAEKIRKRTEKQFPQGIEPHG 617

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPT 379
            DALR+ L    + G+D  +D   L      +  N + N  SR V M    KD       
Sbjct: 618 TDALRFTLAALASTGRDINWDMKRLAG--YRNFCNKLWN-ASRFVLMNTEGKDCGQQADQ 674

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
               + +D  ILS  ++ ++  R  +       A   +     +   D Y +  KP  + 
Sbjct: 675 LMPLSLADRWILSEFNQTVKSYRNAIDTYRFDLAATILYEFTWDQFCDWYLELTKP-VIN 733

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +     +  +  + V+  L  L    +P +   ++  
Sbjct: 734 SGSESEKRSTRHTLISVLEALLRLAHPIIPYITETLWQR 772



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   I           H+GHA++  I D+L R+ R+ G + L+  GTD  G      
Sbjct: 37  KSQESFCIMIPPPNVTGSLHMGHAFQQTIMDILIRYQRMQGKNTLWQVGTDHAGIATQMV 96

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+D+  +             R + + +D   + F  T ++
Sbjct: 97  VERKITAEEGKTRHDYGREAFIDKIWQWKAASGDTITHQMRRLGNSVDWQRERF--TLDE 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +    ++ ++  +  IY+G     +  +     +D EV   A          P+
Sbjct: 155 GLSNAVTEVFIRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRACKGALWHLRYPL 211


>gi|300709425|ref|YP_003735239.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123108|gb|ADJ13447.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 1069

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 133/394 (33%), Gaps = 33/394 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQWMEEEGYFFRLSA 171
              G  ++          D+ +    +V         +++ +P   +      +      
Sbjct: 403 HSYGHCWRCDTPILQMATDQWFITITDVKDELLANIEDSEWHPQWARDNRFRDFVENAPD 462

Query: 172 YQDKLLSYYESHPEFILPIERRNEV-------------------ISFVKSGLKDLSLSRK 212
           +      Y+       +P +   E+                   +   +  L   ++   
Sbjct: 463 WNVSRQRYWGIPIPIWVPEDWSGEMDDVIVIGSREELAERVDRDVDPEEVDLHRPTVDEL 522

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T   G    +    +  VW+D+      T  Y    +    + WPADL +   D     F
Sbjct: 523 TITEGDTTYERVPDVFDVWLDSSVASWGTLDYPGKEE-EFDELWPADLIMEAHDQTRGWF 581

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +           +P  + +        +G+K+SKS+GNV+ P E I+  G DA+R FL+
Sbjct: 582 WSQLGMGTAALGEVPYDEVLMHGFANDSEGKKMSKSVGNVVQPHEAIQRHGSDAMRLFLL 641

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGA----FTE 385
                G+D  +  D +         N + N+    +  M +  +D       A       
Sbjct: 642 SVNPQGEDMRFSWDEMATMERN--LNILWNVFRFPLPYMRMDGFDPEETDLDAVDSDLEL 699

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKPWELKKTNPDR 443
            DE IL+    V +E+          +AL+ ++  V E V R Y    +     + +   
Sbjct: 700 VDEWILARLQTVTREMTAAWDEFRQDQALSALMEFVVEDVSRFYIQVVRERMWDEEDSPS 759

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +        V+RQ+  LL  + P +  +I+  L
Sbjct: 760 KNAAYATLYHVLRQVCALLAPYAPFITEEIYGAL 793



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 19/209 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  +      Y +   H+G  +   + D   R  R+ G DV    G D HG  I    
Sbjct: 48  DEEPFFFVDGPPYTSGAAHMGTTWNKSLKDAYIRQIRMRGHDVTDRPGYDMHGLPIETKV 107

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F D+     ++      +   +++  RT    + 
Sbjct: 108 EERLGFENKKDIEEFGMENFISECKSFADEQLEGLQNDFKSFGVWMDWENPYRTVSPEYM 167

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +     + +++D+G + +G  S     R E    ++EV              P+   E  
Sbjct: 168 EAAWWGFSQVADRGLVDQGKRSISQCPRCETAIANNEVEYEDREDPTVYVEFPLTEREGS 227

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIER 192
              +  + +      +   + E      R
Sbjct: 228 LVIYTTTPWTIPANEFVAVNEELAYQRVR 256


>gi|290475178|ref|YP_003468064.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174497|emb|CBJ81291.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 821

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y      YP+   H+GH     I D + R+ ++ G +V    G D  G     AA  
Sbjct: 37  EKFYSLCMFPYPSGNIHMGHVRNYSIGDAIIRYQKMCGKNVFQPMGWDAFGLPAENAAIK 96

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +  +N  N R     +   YD    I T    ++   + L+ ++ +KG  YK 
Sbjct: 97  NNTHPASWTYKNINNMRKQLKQMGYGYDWSREIATCSPDYYRWEQWLFLRLYEKGLAYKK 156

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   DE    +++V  G            V+  E   +F +++ Y ++LL     
Sbjct: 157 KSVVNWDPVDETVLANEQVING----RGWRSDALVEKREISQWFLKITDYAEELLDGLNH 212

Query: 183 HPEFILPIERRNEVISFVKSG 203
             E+ + ++   +      +G
Sbjct: 213 LEEWPVQVKTMQKNWIGKSTG 233



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 112/272 (41%), Gaps = 36/272 (13%)

Query: 232 IDALTNY---LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------- 279
               + Y    T     +     +A +W P DL++ G +    H +Y             
Sbjct: 498 FVESSWYSARFTCADQPNMMLDERADYWAPVDLYIGGIEHAILHLLYARFIHKVMRDEGL 557

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+++ P   ++F+ G +L  G K+SKS GNV++P + I+  G D LR F++      +  
Sbjct: 558 LTSDEPFV-RLFTQGMVLKDGSKMSKSKGNVVNPQDYIDNYGADTLRLFMMFSAPPEQQL 616

Query: 340 FYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            +   G+    R    L N +       +  I+        + G  T   +++       
Sbjct: 617 EWSDSGVDGAHRFIKKLWNTVHGHAEHCMPKII-------HSSGIVTIEQKNLRRKLHET 669

Query: 398 LQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           L+++ + M+ +L  + A+A V+ L++  +++           +  D+A     V  EV+ 
Sbjct: 670 LKKVTDVMETRLSFNTAIAAVMELINTYNKF--------TVNSETDKA-----VVKEVLD 716

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            + I+L   +P + + ++ +L   +     + 
Sbjct: 717 NVVIMLSPIIPHVTHVLWHVLGHDNALITEEW 748


>gi|262166533|ref|ZP_06034270.1| valyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026249|gb|EEY44917.1| valyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 956

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 130/398 (32%), Gaps = 86/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEAEVRAENNIAADVVLRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPELNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--T 379
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAVGA 667

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
              ++ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           K +  +        + V+ +   L    +P +   I+ 
Sbjct: 727 KGSEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQ 764



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|160881950|ref|YP_001560918.1| isoleucyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160430616|gb|ABX44179.1| isoleucyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 1091

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 78/493 (15%), Positives = 152/493 (30%), Gaps = 33/493 (6%)

Query: 1   MKEREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           +  ++  Y++ A  Y          HI  A+    A+V  R+      ++ F    DE G
Sbjct: 333 VNGKKAYYVTCA-DYVTLTDGTGIVHIAPAFGADDANVGNRY------ELPFVQLVDEKG 385

Query: 56  QKIAKAAQNAGVTTK---VFVDQNSRNFRDMADVLDISYDD-FIRTTEKRHHDTCRILWK 111
           Q  A+    AG+  K     + +     + +  VL   +   F    +       R  W 
Sbjct: 386 QMKAEVTDFAGLFCKKSDEGILKKLGETKQLFKVLKFEHSYPFCWRCDTPLIYYARESW- 444

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS- 170
                    K        + +    N      G  G++ +   N   W      ++    
Sbjct: 445 -------FIKMTAVKDKMIANNNTINWIPETIG-KGRFGDWLENLQDWGISRNRYWGTPL 496

Query: 171 -AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
             +       +       L    +N             +++    D G ++   P+ ++ 
Sbjct: 497 NVWTCDCGKMHSIGSIEELKSMSKNCPEDIELHRPYIDNVTITCPDCGKEMHRVPE-VID 555

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLP 287
            W D+         Y           +PAD      D     F+++   + L+    P  
Sbjct: 556 CWYDSGAMPFAQHHYPFENKEKFEAQFPADFISEAVDQTRGWFYSLLAISTLIFDKAPYK 615

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
             +         G+K+SKS GN +DP + +EE G DA+R++     A      +    + 
Sbjct: 616 NVIVLGHVQDENGQKMSKSKGNAVDPFDALEEYGADAIRWYFYINSAPWLPNRFHGKAVV 675

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENM 405
           +     +           +   +  +D              D+ +LS  + V++ + EN+
Sbjct: 676 EGQRKFMGTLWNTYAFFVLYANIDQFDATKYSLDYDKLPVMDKWLLSKLNTVVKTVDENL 735

Query: 406 QNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
               I      +   V E+ + Y    +     K                +  +A     
Sbjct: 736 AAYKIPETARALQEFVDELSNWYVRRGRERFWAKGMEQDKINAYMTLYTALVTIAKASAP 795

Query: 465 FVPKLANKIFDIL 477
            VP +A  I+  L
Sbjct: 796 MVPFMAEDIYRNL 808



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 63/185 (34%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK---- 57
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG      
Sbjct: 36  KEGETFTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGCMVPRKAGWDTHGLPVELE 95

Query: 58  ------------IAKAAQNAGVT-TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
                       I +      +T  K  V +    + D +  +      DD   T    +
Sbjct: 96  VEKLLELNGKEQIEQYGLEPFITKCKESVWKYKGMWEDFSGTVGFWADMDDPYVTYHNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K++ DKG +YKG     Y  R        EV +G       +     + M+ 
Sbjct: 156 IESVWWSLKQVWDKGLLYKGYKIVPYCPRCGTPLASHEVAQGYKDVKEKSVIAKFRVMDS 215

Query: 163 EGYFF 167
              +F
Sbjct: 216 ANEYF 220


>gi|332108008|gb|EGJ09232.1| leucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 874

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 6/220 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+ + H+GH     I D++AR+ R+ G++VL   G D  G     A
Sbjct: 30  QSKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGMNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +   N  + +     L +++D    + T +  ++   +  + K+ +KG  
Sbjct: 90  AIDNGVAPAKWTRANIADMKSQMQPLGLAFDWSREVATCDPGYYKWNQWFFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V  G            V+  E  GY+  ++ Y D+LL+ 
Sbjct: 150 YKKTQVVNWDPIDQTVLANEQVVDG----RGWRSGAIVEKREIPGYYLAITKYADELLAG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                           V    +  +      R  F   I+
Sbjct: 206 VNDSTSAHYLDGWPERVRLMQEHWIGKSEGVRFAFTHDIR 245



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 114/356 (32%), Gaps = 44/356 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + E++ N      GA  +      +   +++   Y+ R              + 
Sbjct: 480 SGNPLNKCESFLNVACPTCGAAARRETDTMD--TFVDSSWYYMRYCCPDSDGAMVDARNE 537

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D G+    +P   +      L      + Y
Sbjct: 538 YWMPMDQYIGGIEHAVLHLLYARFWTKAMRDIGLVSFSEPFTKLSTQGMLL----NESYY 593

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  F+P+++ V   +  +       A   +  LP+          L   EK+S
Sbjct: 594 REDASGKKRWFYPSEVDVKFDERGQP----VGAVAKADGLPV---------QLGGIEKMS 640

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  NV++P ++I + G D  R F +      +   +   G         A G+   + R
Sbjct: 641 KSKNNVVEPRDIIAKFGADTARTFTMFAGPPDQSAAWSDSG---------AEGVFRFLRR 691

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             S  +K     I       +    +      +L++I  +      +  ++  + L++ +
Sbjct: 692 LWSFGVK-VAPRITAVDTAAQGTNPLRYEVHTLLKQIGADYDRLQYNTVVSGAMKLLNAL 750

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                              A+       E +  L   L    P + + ++  L   
Sbjct: 751 ---------------EDGAAAADDATLREGVGILLRALYPAAPHVTHALWGELGFT 791


>gi|326476475|gb|EGE00485.1| leucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 933

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     A
Sbjct: 73  SSKEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENA 132

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  QN  N ++    L I   +D  + T     +   + L+  + +KG  
Sbjct: 133 AIERGIHPEGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLA 192

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  E + +FFR++A+++ LL  
Sbjct: 193 YQAEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKD 249

Query: 180 Y 180
            
Sbjct: 250 L 250



 Score = 45.1 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 28/243 (11%)

Query: 257 PADLHVIGKDILRFHAIY----WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           P D++V G +    H +Y    +        +            L     +        D
Sbjct: 582 PVDIYVGGIEHAILHLLYSRFIFKFLAAEGKIENAADPPEPFLKLLSQGMVHGK--TYSD 639

Query: 313 PIEVIEEVGVDALRYFL-----VREIACGKDGFYDKDGLK--KRVNADLANGIG---NLV 362
           P            +  L     +      +   +D+  +   +R  + +   +    N +
Sbjct: 640 PET--GRFLRAGCQRMLRVPMSLFSAPVSEVLEWDETKIVGIQRWFSRIWKAVEDTGNSL 697

Query: 363 SRS-----VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            R+        +    D  +P  G  +E++ ++L + +  +  +   ++       L  V
Sbjct: 698 KRANFASAPGALSSLNDMALPPLGKLSETESNLLLMTNNTISSVSYCLEKNQYG--LNTV 755

Query: 418 I-SLVSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEV-IRQLAILLQAFVPKLANKIF 474
           I  L+   +       P E  K +P   S T LY T+ + +  L  +L    P  A++ +
Sbjct: 756 ISDLIKLTNTIAAVPLPGESSKPSPSAQSITQLYTTLYISLNSLLRMLAPIAPAFASECW 815

Query: 475 DIL 477
           ++L
Sbjct: 816 EVL 818


>gi|15836739|ref|NP_297427.1| valyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|12585351|sp|Q9PH12|SYV_XYLFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|9104920|gb|AAF82947.1|AE003867_1 valyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 994

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 135/408 (33%), Gaps = 94/408 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++     + L+  E      +P    N         ++D  +SR+   W
Sbjct: 407 IEPYLTAQWFVKMETLAARGLALVERGAVTFVPPNWINT-YRHWMENIQDWCISRQ-LWW 464

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+ D
Sbjct: 465 GHRIPAWFDTQGGVYVGRSEAEVRAKHALGPEVTLTQDNDVLETWFSSQLWPFSTLGWPD 524

Query: 247 NPDGSK---AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               ++   A++ P+ + V G DI+ F    +       + N+P      +      +G+
Sbjct: 525 PTAMAEHGYARYLPSSVLVTGFDIIFFWVARMIMATDHFTGNVPFHDVYITGLIRDAQGQ 584

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 585 KMSKSKGNVLDPLDIIDGITLDDLVAKRTTGLMQPKLAEKIAKATRKEFPEGIAPHGADA 644

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------ 378
           LR+ +      G+D  +D    +   N    N + N  +R V M   D     P      
Sbjct: 645 LRFTIAALATHGRDIKFDLGRAEGYKN--FCNKLWN-ATRFVLMNTADDTAHSPAQHQAG 701

Query: 379 --------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
                   TP   T++++ ILS  + +  E                +         D + 
Sbjct: 702 QDGQDAPRTPQPRTDAEQWILSRLTAITAEAHAQFAAYRFDLLAQALYEFAWNEFCDWFV 761

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  KP  L   +   A++  +  + V+  L  LL   +P +  +++  
Sbjct: 762 ELAKP-ALNSDDTQAAASTRHTLLYVLETLLRLLHPLIPFITEELWRQ 808



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 20/137 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  QPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMCGDDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                                    +  Q+          L +S D      T + +   
Sbjct: 94  NVVLEGHGETRDSLGRDGFINKVWEWKQQSGDTIERQMRRLGVSADWSRSTFTMDPQPSA 153

Query: 105 TCRILWKKISDKGDIYK 121
                + +  + G IY+
Sbjct: 154 AVTEAFVRWYEAGLIYR 170


>gi|152978732|ref|YP_001344361.1| valyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150840455|gb|ABR74426.1| valyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 948

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAETAIKAVEDGEIQFVPKQYENLYYSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEQGNVYVGRNEEEVRSKNGLNSDVALRQDEDVLDTWFSSALWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
                  A F P ++ + G DI+ F         +           +P      +     
Sbjct: 491 QQTK-ELAMFHPTNVLITGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNVIDP+++I+ +                                     
Sbjct: 550 EQGQKMSKSKGNVIDPLDMIDGIDLESLLVKRTGNMMQPQLAEKIAKATRKEFPQGIQAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N    +++    D        
Sbjct: 610 GTDALRFTLSALASTGRDINWDMKRLEG--YRNFCNKLWNASRFALTNEKLDLSTGERD- 666

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D+ I +  ++ ++  R  +       A A++         D Y +  KP     
Sbjct: 667 --FSIADKWIQAELNKAVKNFRSALDQYRFDLAAAELYEFTWNQFCDWYLELTKP-VFAN 723

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +     +  V V+ +L  L    +P +  +I+ 
Sbjct: 724 GTAAQKRAASFTLVNVLEKLLRLAHPVIPFITEEIWQ 760



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I+          H+GHA++  + D L R+HR+ G + L+ TGTD  G       
Sbjct: 31  SRPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLIRYHRMQGDNTLWQTGTDHAGIATQMVV 90

Query: 63  Q---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
           +                     K++  +       S+  R + + +D   + F  T ++ 
Sbjct: 91  ERKIAAEENKTRHDYGREAFIEKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDEG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             D  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 149 LSDAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|23016029|ref|ZP_00055790.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 866

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 42  GKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGFNVLHPMGWDAFGLPAENAA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    R+    + +SYD    + T E +++   + ++      G +Y
Sbjct: 102 ISNNVHPAKWTRENIAAMREQLKSMGLSYDWRREVATCEPQYYRHEQKMFLDFLKNGLVY 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   +     +++V  G            V+      +F +++AY   LL   
Sbjct: 162 RKESWVNWDPVENTVLANEQVIDGHG----WRSGALVEKRLLSQWFLKITAYAQDLLDSL 217

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
            +   +   +    E       G
Sbjct: 218 ATLERWPERVRLMQENWIGRSEG 240



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 113/347 (32%), Gaps = 42/347 (12%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQW-MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           N  + +             P +   +    FF  S Y  +  S       F         
Sbjct: 481 NPLDHHPTWKHVNCPVCGKPARRETDTFDTFFESSWYFARYTSPDRQDVAFDRAAADYWM 540

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            +     G++   L      +  +   D  Y+      A         +        A  
Sbjct: 541 SVDQYIGGIEHAVLHLLYSRFFTRALKDCGYLGVKEPFAGLLTQGMICHETYKSADGAWL 600

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           +P D+ V G D    HA+           P+            + EK+SKS  NV+DP  
Sbjct: 601 FPTDV-VSGPDGKLVHAV--------TGAPVTG---------GRSEKMSKSKKNVVDPAG 642

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYD 374
           +I+  G D  R F++ +    +D  + + G+         +G    V+R   M+   +  
Sbjct: 643 IIDGYGADTARLFMLSDSPPERDLDWTEAGI---------DGAWRYVNRLWRMVASAELP 693

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    +     I  +  + + ++ E+++    ++A+A++  + + +          
Sbjct: 694 AAGTPMPELSTETLKIRRLLHKTIAQVGEDLERFHFNKAVARIREMTNGL---------- 743

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 P   +   +V  E +   A L+   +P LA +++  L  A 
Sbjct: 744 ---GELPAGDAGAAWVLREGLEATARLIGPMMPHLAEEMWQTLGGAG 787


>gi|225025311|ref|ZP_03714503.1| hypothetical protein EIKCOROL_02209 [Eikenella corrodens ATCC
           23834]
 gi|224941929|gb|EEG23138.1| hypothetical protein EIKCOROL_02209 [Eikenella corrodens ATCC
           23834]
          Length = 945

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|330963190|gb|EGH63450.1| valyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 948

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 124/402 (30%), Gaps = 87/402 (21%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         L           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTLHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP   
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW 720

Query: 437 KKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 721 DETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|292490669|ref|YP_003526108.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579264|gb|ADE13721.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 819

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             REK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  STREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMGGKNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  QN    R     L  +YD    + T    ++   + L+ K+ DKG +
Sbjct: 90  AMQNRVPPDQWTYQNIDYMRGQLKRLGFAYDWSRELATCHPAYYHWEQWLFTKLFDKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V  G            V+  E   +F +++AY ++LL+ 
Sbjct: 150 YKKTALVNWDPVDQTVLANEQVVDG----RGWRSGAVVERREIPQWFLKITAYAEELLTG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 206 LDQLSGWPEQVRTMQRNWIGRSEG 229



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 107/292 (36%), Gaps = 38/292 (13%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
              + ++   Y               +  +W P D ++ G +    H +Y   F      
Sbjct: 492 FDTFFESSWYYARYCCPDNDAAMVDERGHYWLPVDQYIGGIEHAVLHLLYARFFHKVMRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +  + P    + + G +L  G K+SKS GN +DP  +IE+ G D  R F++      
Sbjct: 552 MGLVRGDEPFT-HLLTQGMVLKDGAKMSKSKGNTVDPQALIEQYGADTARLFIMFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL-SVCS 395
           +   + + G++          +  L     + + +    + P       +++ +L +   
Sbjct: 611 QSLEWSESGVEGAH-----RFLKRLWRMVATHVAQRQGSVPPLEVKTLSAEQKLLRTKVH 665

Query: 396 RVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTV 452
             + +  +++ +    + A+A V+ L++             L K + D  +   V     
Sbjct: 666 ETIVKASDDIGRRYTFNTAIAAVMELMNA------------LAKLDDDTPQGQAVRQ--- 710

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           E +  + +LL    P + ++++  L    E     +      P  ++ +T D
Sbjct: 711 ETLETVVLLLSPITPHICHRLWRELG--HEGAVIDASWPEADPAALVKETVD 760


>gi|56477924|ref|YP_159513.1| leucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821074|sp|Q5P252|SYL_AZOSE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56313967|emb|CAI08612.1| leucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 873

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVLAR+HR+ G +VL   G D  G     AA
Sbjct: 31  GKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARYHRMRGFNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L  + D    + T +  ++   + L+ ++  KG IY
Sbjct: 91  IQNNVPPAKWTYANIDYMKTQLKRLGFALDWSRELATCKPDYYRWEQWLFTRLYQKGLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   DE    +++V  G            ++  E   Y+ +++AY D+LL   
Sbjct: 151 KKLGTVNWDPVDETVLANEQVIDG----RGWRSGALIEKREIPMYYMKITAYADELLEAL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   ++   +       G
Sbjct: 207 DTLTGWPEQVKLMQKNWIGRSEG 229



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 110/355 (30%), Gaps = 53/355 (14%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVIS 198
           E      G+    + + +    E  ++F   A  D   +  +    +  P  +    +  
Sbjct: 482 ECDCPKCGKPAKRETDTMDTFVESSWYFLRYASADNGQAMVDERVNYWAPVDQYIGGIEH 541

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT---TTGYLDNPDGSKAKF 255
            +   L     +R   D G+    +P          L         T Y D   G K   
Sbjct: 542 AILHLLYSRFFTRAMRDEGLVNVSEP-------FTNLLTQGMVVAETYYRDADGGKKQWI 594

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            PAD+ V   +          A L +   P    V   G      EK++KS  N +DP  
Sbjct: 595 NPADVEVERDE----KGRIVAAKLTADGAP----VVIGGI-----EKMAKSKNNGVDPQA 641

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++++ G D  R F++      +   +   G++         G    + R  S        
Sbjct: 642 LVDQYGADTARLFIIFAAPPDQQLEWSDSGVE---------GAYRFLRRVWSFGHAFVSE 692

Query: 376 MIPTPGAFTESDE--------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
             P   A  + D         ++       L++   +      +  ++  + +++     
Sbjct: 693 FRPQLPADRQLDAVQLPEALAAVRREIHVCLRQANYDFGKHQFNTVVSAAMKILNA---- 748

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                   L+K   D A+    V  E +  L  LL    P +A+ ++       +
Sbjct: 749 --------LEKAPRDVAAAHAQVAEEGLDILLRLLAPITPHVAHALWQDCGFTGD 795


>gi|148643401|ref|YP_001273914.1| isoleucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552418|gb|ABQ87546.1| isoleucyl-tRNA synthetase, IleS [Methanobrevibacter smithii ATCC
           35061]
          Length = 1090

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 82/467 (17%), Positives = 156/467 (33%), Gaps = 24/467 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F      D+      DE G     A + AG     F    +           + Y +   
Sbjct: 366 FEVGKAYDLPIFCPVDESGNFTDDAGKYAG----EFCKAANDGIIADLQESGLMYRNETI 421

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                    C+     ++ K    K        + DE    +        G++ +   N 
Sbjct: 422 EHRYGVCWRCKTPIIYLATKQWFLKVT-DIKQKMLDEIDKVEWVPQWAGQGRFRDWVDNA 480

Query: 157 VQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             W       +   +  ++       +               IS     L       +  
Sbjct: 481 KDWTISRQRYWGIPIPIWECPDCGELKVIGSVEELKNEALNDISVDDDELVHRPYVDEII 540

Query: 215 D----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G ++   P  ++ VWID+       + Y         +++P D    G D    
Sbjct: 541 MKCDKCGSEVKRIPD-VLDVWIDSGVA-GWASLYYPQQQEKFNQWFPYDFITEGHDQTRG 598

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++      +    +P  K +     +   G+K+SKSLGNV+ P EVIE+ G D LR++
Sbjct: 599 WFYSQLGTGVISMGQVPYKKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIEKYGADVLRFY 658

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTES 386
           L+       D  +  D L   VN          V  +  M L +++    T       + 
Sbjct: 659 LLWASKPWDDLKFVWDELLN-VNKMFNILWNVYVFSTTYMSLDEFNPTKITEKDIILRDE 717

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPD 442
           D  I+S  + +++E+ E+++    H+A  ++ + +       Y      + W  +  +PD
Sbjct: 718 DNWIMSRANTLVKEVGEDLEKLSFHKATRKINNFILEDLSRWYVRLIRGRTWV-ESDDPD 776

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +     Y     I +L  +L    P +  +I++ L    +    +S+
Sbjct: 777 KLGA-YYSLYTAIYKLISVLCPIAPHVCEEIYENLVKGVDENAPESI 822



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 20/173 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +        Y + + H+G A+  +I D   R+  ++G  +    G D HG  I    + 
Sbjct: 40  PQYSFLDGPPYCSGKIHLGTAWNKVIKDSYLRYKSMNGFSLRRQAGWDMHGLPIEHKVEE 99

Query: 65  AG------------------VTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F   N        D L +   ++D   T + ++ +
Sbjct: 100 LMGIKSKQEIEENIGIAKFVDKCKEFAIDNKLAMEKEFDDLGVWMDWEDPYMTLDPKYME 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +     K+ +++  +        +    E      E+              PV
Sbjct: 160 SSWWTLKRANEQNLLVNDKRVISWCPHCETALAAAEIDYEEKVDPSIFVKFPV 212


>gi|254796861|ref|YP_003081698.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590097|gb|ACT69459.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 854

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + H+GH    +I DVLAR+ R  G +VL   G D  G    KAA
Sbjct: 48  KRKKYYVLSMFPYPSGKLHMGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 107

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            ++ +  +++ ++N    R     + +SYD    + T    ++   +  +      G  Y
Sbjct: 108 ISSNIHPRIWTEKNIAKMRTSLKSIGLSYDWNRELSTCSPEYYKHEQKFFLAFLKAGLAY 167

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D     +++V  G            V   +   +F ++S + ++LL   
Sbjct: 168 KKNSEVNWDPIDNTVLANEQVIDG----RGWRSGAVVVKRKIPQWFLKISDFSEELLKGL 223

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S   +   ++           G
Sbjct: 224 DSLTGWPEKVKTMQANWIGKSEG 246



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 119/373 (31%), Gaps = 84/373 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV + E+          Q   +          LP E    V      
Sbjct: 447 WGISRQRYWGCPIPVVYCEKCS-------MQPVKVEDL----PITLPEEINFTVQGNPLE 495

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADL 260
                  +      G     D       + +  + Y       +     ++  +  P D+
Sbjct: 496 HHPTWKYTNC-PKCGGPAVRDTD-TFDTFFE-SSWYFAAFCSKEGGIDKESCEYFLPVDM 552

Query: 261 HVIGKDILRFHAIYWPAFLLSAN--------LPL----PKKVFSHGFI------------ 296
           ++ G +    H +Y   F  + N         P      + +  H               
Sbjct: 553 YIGGIEHAILHLLYARFFTRALNKCGYVDVVEPFHSLLTQGMVCHESYQNSSGEYLYPEE 612

Query: 297 ----LHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               L KGEK        +SKS  N++D  E++ + G DA R+F++ +        +   
Sbjct: 613 AKLLLEKGEKVLVGKMEKMSKSKRNIVDLDEIVSKYGADAARFFILSDNPPENSFGWSDR 672

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G+           I NLV R +S              A  ++++++    +R++ ++ + 
Sbjct: 673 GINASF--KFLQRIKNLVERYLS----------SKTSAEVQTEQNVKIQINRIISDMTKY 720

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +    ++ A+A++  LV+                      S    ++ E I  L  +L+ 
Sbjct: 721 IDEIKLNCAVAKIHELVNL--------------------LSASGALSKETIHILLRILEP 760

Query: 465 FVPKLANKIFDIL 477
           FVP LA  +   L
Sbjct: 761 FVPHLAEYLASKL 773


>gi|82701875|ref|YP_411441.1| valyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123740759|sp|Q2YB22|SYV_NITMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|82409940|gb|ABB74049.1| valyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 926

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 124/388 (31%), Gaps = 75/388 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  + ++  ++    + L    S     +P      V +     ++D  +SR+   W
Sbjct: 365 VEPMLTDQWYVTMNGLARRGLEAVASGEVKFIPENWA-HVYNQWLENIQDWCISRQ-LWW 422

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +     +T G+ +   
Sbjct: 423 GHRIPAWYDEDNNIFVAHNLEEAQRLAGGRKLVQDEDVLDTWFSSALWPFSTLGWPEKTP 482

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                  P  + V G DI+ F    +   +   +  +P  +   +      +G K+SKS 
Sbjct: 483 ELDTFL-PTSVLVTGFDIIFFWVARMVMMSLHFTGKVPFREVYITGLIRDAEGHKMSKSR 541

Query: 308 GNVIDPIEVIEE-------------------------------------VGVDALRYFLV 330
           GNV+DP+++I+                                       G DALR+   
Sbjct: 542 GNVLDPLDLIDGIALPDLITKRTSGLMNPRQAESIEKITRKQFPEGIPAFGADALRFTFA 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDES 389
              + G+D  +D    +     +  N + N     +     KD   +   P  ++++D  
Sbjct: 602 SLASHGRDIKFDMQRCEG--YRNFCNKLWNAARYVLMNCEGKDTGLVESVPLEYSDADCW 659

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           I+    +    + +  Q+     A  ++   V +   D Y +  K  +L   N     T 
Sbjct: 660 IIGRLQQAETAVAQAYQDYRFDMAAREIYEFVWDEYCDWYLEFAKV-QLNSGNEVVQRTT 718

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
                 V+     L    +P +  +++ 
Sbjct: 719 RRTLARVLETALRLAHPLIPFITEELWQ 746



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 24/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GHA++  + D L R+HR+ G + L+  GTD  G       +    
Sbjct: 42  CIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQLD 101

Query: 68  T----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                               + ++     SR  R M    D S + F  T +        
Sbjct: 102 QQSIDRRDLGREAFLARVWEWKEESGSTISRQMRRMGASCDWSRERF--TMDGGLSRAVT 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  +G IY+G     +    +   +D EV    +         P +
Sbjct: 160 EVFVRLYREGLIYRGERLVNWDPVLQTAVSDLEVVSAEEEGSLWHILYPFE 210


>gi|300703051|ref|YP_003744653.1| leucyl-tRNA synthetase (leucine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
 gi|299070714|emb|CBJ42009.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
          Length = 877

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 6/211 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCDPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITDYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +           +   I   +        S
Sbjct: 212 LDPLGWPERVKLMQQNWIGKSEGVRFAFPHS 242



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 50/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  + +      G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 TGNPLNKDSRFLSCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAGTMVD-GRND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    P D+ V   +             + A L    +    G +    EK+S
Sbjct: 592 REDAVGKKHWINPVDVDVQTDE---------RGRPIGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   ++  G++         G    + R
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWNDAGVE---------GASRFLRR 689

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +  +   D +    G       T++D ++      VL++   + +    +  ++  + 
Sbjct: 690 MWNFGVAHGDAIRAGHGNGVVDGATDADRALRRELHTVLKQANYDYERLQYNTVVSATMK 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++      +  K       +  R         E    L  +L   VP + + ++  L  
Sbjct: 750 MLNA----LEGAKD---AGVDARR---------EGFGILLRVLYPVVPHITHVLWQELGY 793

Query: 480 AD 481
           A 
Sbjct: 794 AG 795


>gi|207721577|ref|YP_002252016.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum MolK2]
 gi|206586738|emb|CAQ17323.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum MolK2]
          Length = 877

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 6/211 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCDPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITDYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +           +   I   +        S
Sbjct: 212 LDPLGWPERVKLMQQNWIGKSEGVRFAFPHS 242



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 120/362 (33%), Gaps = 50/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  + +      G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 TGNPLNKDSRFLSCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAGTMVD-GRND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    PAD+ V   +             + A L    +    G +    EK+S
Sbjct: 592 REDAAGKKHWINPADVDVQTDE---------RGRPIGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   ++  G++         G    + R
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWNDAGVE---------GASRFLRR 689

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +  +   D +    G       T++D ++      VL++   + +    +  ++  + 
Sbjct: 690 MWNFGVAHGDAIRAGHGNGVVDGATDADRALRRELHTVLKQANYDYERLQYNTVVSATMK 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++      +  K       +  R         E    L  +L   VP + + ++  L  
Sbjct: 750 MLNA----LEGAKD---AGVDARR---------EGFGILLRVLYPVVPHITHVLWQELGY 793

Query: 480 AD 481
           A 
Sbjct: 794 AG 795


>gi|307261981|ref|ZP_07543637.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306868312|gb|EFN00133.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 954

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 130/397 (32%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEAGNVYVARSEEEVRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 ENGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   RE +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIESTFNRTVGTFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GTEAQKRGASQTLVRVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|301510869|ref|ZP_07236106.1| valyl-tRNA synthetase [Acinetobacter baumannii AB058]
          Length = 787

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 208 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 265

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 266 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 325

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 326 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 384

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 385 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 444

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 445 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQQARPD 502

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 503 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 562

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 563 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 601


>gi|121608058|ref|YP_995865.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166231650|sp|A1WGU0|SYL_VEREI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121552698|gb|ABM56847.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 907

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 8/236 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y  + + YP+ + H+GH     I D+L R+ R++G +VL   G D  G     AA
Sbjct: 31  GKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    +     L   I +   + T +  ++   + L+ K+ DKG  Y
Sbjct: 91  IKNGMPPARWTRENIAYMKQQMQALGLAIDWSRELATCDPGYYKWNQWLFLKMLDKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V +G            V+  E  GY+ +++ Y ++LL++ 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVNEGKG----WRTGAVVEKREIPGYYLKITDYAEELLAFV 206

Query: 181 ESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                   P       E       GL+         D G  I     Y+     D 
Sbjct: 207 TDDRLPGWPERVKLMQENWIGKSEGLRFAFPHDVRGDDGALIGGGRLYVFTTRADT 262



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 77/222 (34%), Gaps = 20/222 (9%)

Query: 289 KVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              +   I ++G   +SKS  N +DP E+I + G D  R   +          ++   ++
Sbjct: 637 DWPAGSAIDYEGMGTMSKSRNNGVDPQELIGKYGADTARLHTMFTAPPEAALEWNDAAVE 696

Query: 348 KRVNADLANGIGNL--------VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                     + N         ++ + + +          P AF +  +++     ++L+
Sbjct: 697 GSHR--FLRRVWNFGLQLHAAGMTAASASLAGAGAPQTRNPPAFGKPAKALRREIHQLLR 754

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           ++  + Q    +  ++  + +++ ++ +         K ++P   ++      E    L 
Sbjct: 755 QVDYDYQRMQYNTVVSGAMKMLNALENF---------KASDPASQASDPLALTEGFGILL 805

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
             L    P +A+ ++  L  A               G  L +
Sbjct: 806 RCLYPVTPHIAHSLWRDLGYAAAVGELLDAPWPQVDGQALVQ 847


>gi|16127979|ref|NP_422543.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236801|ref|YP_002519238.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|32171583|sp|Q9A217|SYL_CAUCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782490|sp|B8GW27|SYL_CAUCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13425523|gb|AAK25711.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965974|gb|ACL97330.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 861

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  GRPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFNVLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N    R+    L IS D      T +  ++   +  + ++  +G +Y
Sbjct: 91  MERGVHPKGWTYDNIAAMREQLKSLGISVDWSREFATCDPEYYGKQQAWFLRLLKRGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   S  +   D     +++V  G            V+  +   +F R++ Y D L+   
Sbjct: 151 RKEASVNWDPVDMTVLANEQVIDGKG----WRSGAVVEKRKLTQWFLRITDYADALIDGL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++   +   +    E       GL
Sbjct: 207 KTLDRWPDKVRLMQENWIGRSKGL 230



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 27/181 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P ++ E  GVD+ R F++ +    +D  +   G++             
Sbjct: 622 EKMSKSKKNVVAPEDIFEAYGVDSARLFVMSDSPPERDVQWTNSGVEGSW---------- 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
              R    +  ++D       A  +SDE+ L++     +++  + ++++    +  +A++
Sbjct: 672 ---RFTHRLWNEFDSQPAGDFAHDDSDEAALALRKAAHKLIGFVTDSIEGFRFNSGVARL 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              ++ +        P          +  VL    E +  LA L+  F P LA + +  +
Sbjct: 729 YEFLNAL-----KAAP------AEGASQAVLAARAEALNILARLVAPFTPHLAEEAWARM 777

Query: 478 F 478
            
Sbjct: 778 G 778


>gi|254523440|ref|ZP_05135495.1| valyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721031|gb|EED39556.1| valyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 942

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 126/396 (31%), Gaps = 82/396 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++     + L   E      +P    N       + ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDDLAKRGLELVEDGSISFVPPNWINT-YRHWMNNIQDWCISRQ-LWW 429

Query: 217 G--IKIPDD-----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           G  I    D                                ++  W  +     +T G+ 
Sbjct: 430 GHRIPAWFDAATGSCYVGRSEEEVRAKHNLGSEVVLNQESDVLETWFSSQLWPFSTLGWP 489

Query: 246 DNPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           +    +     ++ P+ + + G DI+ F    +      L   +P     F+      +G
Sbjct: 490 NEQAMAERGFDRYLPSSVLITGFDIIFFWVARMIMATDNLVGKIPFKDVYFTGLIRDGQG 549

Query: 301 EKISKSLGNVIDPI-------------------------------------EVIEEVGVD 323
           +K+SKS GNV+DP+                                     + I   G D
Sbjct: 550 QKMSKSKGNVLDPLDIIDGITIDDLVAKRTGGLMQPKMVEKIEKATRKEFPDGIAAHGAD 609

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ +      G+D  +D +  +   N    N + N  SR   M  +        P   
Sbjct: 610 ALRFTIAALATHGRDIKFDMNRAEGYKN--FCNKLWN-ASRFALMNTEG-AAFNGVPKPR 665

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T+++  IL+  +    E + +            +         D + +  KP  L   + 
Sbjct: 666 TDAERWILARLAATTAEAQGHFAAYRFDLLAQCLYEFAWNAFCDWFLELSKP-ALNGADA 724

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +  +  + V+  L  LL    P +  +++  L
Sbjct: 725 ADAESTRHTLLYVLEALLRLLHPLTPFITEQLWQQL 760



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 24/139 (17%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  AGV------------------TTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRH 102
                                    +  Q      R  R +    D S   F  T + + 
Sbjct: 94  NLTLEGKGETRDSLGREGFIGKVWEWKQQSGDTIERQMRRLGTSADWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYK 121
                  + +  ++G IY+
Sbjct: 152 SAAVNEAFVRWYEQGLIYR 170


>gi|162147547|ref|YP_001602008.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545652|ref|YP_002277881.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786124|emb|CAP55706.1| Valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533329|gb|ACI53266.1| valyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 898

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 126/361 (34%), Gaps = 43/361 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      ++   +      +   E+     +P +  N   ++++  ++   +SR+   W
Sbjct: 369 VEPRLTTQWYCDAATLAGPAIEAVETGQVRFVPQQWENTFFAWMRE-IQPWCISRQ-LWW 426

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 427 GHRIPAWYGPDGHVFVARDEDGARAEALAHYGREEALTRDEDVLDTWFSSALWPFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      A+++P D+ V G DI+ F    +         ++P             +G+K
Sbjct: 487 PEQTA-ELARYYPTDVLVTGFDIIFFWVARMMMMGLHFMKDVPFRTVFIHGLVRDERGQK 545

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN IDP++++E+ G DA+R+ +      G+D    +  +++  +      I N  
Sbjct: 546 MSKSKGNGIDPLDMVEQYGADAMRFTVCALTGLGRDVKLGQKRIEE--HRSFVTKIWNAA 603

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                  +       P     +     +L   +R + E    ++        A     V 
Sbjct: 604 RFCEMNGVAPVADFRPD-AVSSPLGRWVLGEAARAVAEADAALEAFRFDEYAATCYRFVW 662

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D + +  KP      + ++A+ +  V   V+  +  +LQ  +P + + ++      
Sbjct: 663 NCFCDWFLEFAKP-VFTGGDAEQAAEIRAVAAHVLGIILRILQPVMPFVTDDLWAQFGYG 721

Query: 481 D 481
           +
Sbjct: 722 E 722



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 20/169 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAAQ 63
           +  I  PN     H+GHA  M + D L R+ R+ G D L+  GTD  G      + +  Q
Sbjct: 37  TIMIPPPNVTGTLHVGHALTMTLQDTLIRWRRMQGRDTLWQPGTDHAGIATQMVVERTLQ 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADV--------------LDISYDDFIRTTEKRHHDTCRIL 109
             G++ +    +                           + +     T +       R +
Sbjct: 97  KEGISRRDLGREAFEQRVWQWKAESGGGITTQLRRLGASLDWPRERFTMDDGLSQAVREV 156

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +  +  +G IY+      +     +  +D EV              PV+
Sbjct: 157 FVTLYQQGLIYRDRRLVNWDPAFRSAISDLEVDNREVQGSLWYIRYPVE 205


>gi|167648985|ref|YP_001686648.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082990|sp|B0T6E7|SYL_CAUSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167351415|gb|ABZ74150.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 861

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  RPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFNVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K +   N    R+    L +S D      T +  ++   +  +  +  +G +Y+
Sbjct: 92  ERGVHPKGWTYDNIAAMREQLKALGLSIDWSREFATCDPEYYGKQQAWFLHLLKRGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +   D     +++V  G   +        V+  +   +F R++ Y D L+   +
Sbjct: 152 KEASVNWDPVDMTVLANEQVIDGKGWRSGAT----VEKRKLTQWFLRITDYADALIDGLK 207

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +    E       GL
Sbjct: 208 TLDRWPEKVRIMQENWIGRSKGL 230



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 76/183 (41%), Gaps = 31/183 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P ++ E  GVDA R F++ +    +D  +   G++             
Sbjct: 622 EKMSKSKKNVVAPEDIFEAYGVDAARLFVMSDSPPERDVQWTNSGVEGSW---------- 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSV---CSRVLQEIRENMQNQLIHRALAQV 417
              R    +  +++       A  +SD + +++     R++  + ++++    +  +A++
Sbjct: 672 ---RFTHRVWNEFESQPAGDFAHDDSDAAAVALRKGAHRLIGFVTDSIEGFRFNSGVARL 728

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              ++             + K  P   ++  VL    E +  LA L+  F P LA + + 
Sbjct: 729 YEFLN-------------MLKAAPAEGASQGVLAARAEALEILARLISPFTPHLAEEAWA 775

Query: 476 ILF 478
            L 
Sbjct: 776 HLG 778


>gi|73669475|ref|YP_305490.1| valyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|90101530|sp|Q46B32|SYV_METBF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72396637|gb|AAZ70910.1| valyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 869

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 146/401 (36%), Gaps = 29/401 (7%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE------EGY 165
            + D+  + +     W         ++ + +   D        + ++W  E      + +
Sbjct: 324 FLYDQKPLEQNVGLCWRCDTPIEILSEPQWFVKIDNDAILKAADEIKWYPEYMKVRLQNW 383

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK---DLSLSRKTFDWGIKIPD 222
              +            + P  I   ++  EV+   +S L    + +  +K    G    +
Sbjct: 384 TGTMEWDWCISRQRIFATPIPIWHCKKCGEVMVAEESWLPIDPNEAAPKKACACGSTEFE 443

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
               ++  W+D+    L  TG+            PA +   G DI+R  A Y    +  L
Sbjct: 444 PETDVLDTWMDSSITALHVTGWES----EHDLRLPAQIRPQGHDIIRTWAFYTILRSLAL 499

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P    V +   +   G K+SKSLGNVI P EV  +   DA R +     + G D  
Sbjct: 500 EGKRPWDSIVINGMVLGPDGHKMSKSLGNVISPEEVTTKYSADAFRQWGAVGGSTGSDVM 559

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRV 397
           +    +     +     + ++   S+S  LK +   D       +    D  +LS  +R+
Sbjct: 560 FRWKDVVSA--SRFLQKMWSIYRFSMS-HLKGFGQEDAEKFQKDSLHIIDRWLLSKLNRL 616

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +    + + +         +     E   D Y +  K   L   +P+      YV     
Sbjct: 617 VDTATKELDDYQFDSTFKAIRGFAWEVLADNYLELVK-GRLYGDDPEGKRAAQYVLYRTT 675

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRL 493
           + L++LL  F+P  A +++  L  +DE+   + + ++D+ L
Sbjct: 676 KTLSLLLAPFIPFFAEELYSRL--SDESVHTQAWPAVDESL 714



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 51/145 (35%), Gaps = 15/145 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG       +
Sbjct: 37  RPQYIIDTPPPYPTGNFHIGNALNWCYIDFVARYKRMRGYNVMFPQGWDCHGLPTEVKVE 96

Query: 64  NAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                TK                  N    R     L  S D  +   T +  +    + 
Sbjct: 97  EIHGITKNQVPRAEFRKMCRELTAGNIDKMRKTMLRLGFSVDWSNEFITMDPSYFVKTQK 156

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDE 133
            + ++ +K  IY   +   +  R E
Sbjct: 157 SFVRMYNKDYIYHEEHPVNWCPRCE 181


>gi|328951485|ref|YP_004368820.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451809|gb|AEB12710.1| leucyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 875

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E EK Y+     YP+   H+GH     + DVLARF +  G  VL   G D  G     A
Sbjct: 27  EEGEKQYVLMMFPYPSGDLHMGHLKNYTMGDVLARFKKQQGYTVLHPMGWDAFGLPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N  + ++   ++ I   +D  + T    ++   + ++ K+ +KG +
Sbjct: 87  ALKFGVHPAEWTFKNIASAKESLRLMGILYDWDREVTTCTPEYYRWNQWIFLKMYEKGLV 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + +    +++V    DG+ +  +   V+  E E ++ R++AY D+LL  
Sbjct: 147 YRAKGLVNWCPKCQTVLANEQV---VDGRCWRHEDTLVEKKELEQWYLRITAYADRLLQD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++           G
Sbjct: 204 LEQLTGWPEKVKAMQRAWIGRSEG 227



 Score =  101 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 28/186 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKSLGN +     ++E G D  R  ++       D  + ++G+          
Sbjct: 630 LWKPAVMSKSLGNGVMVGPFVKEQGADIARITILFAAPPENDMVWTEEGVS--------- 680

Query: 357 GIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R      +D D +        P A + +D ++     R L+++ E+ +N   +
Sbjct: 681 GAWRFLNRVWRRFAEDKDALTTLEDAFDPAALSGADRALYRALHRTLKKVGEDTENLRFN 740

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++ L++ +  Y     P  + K                +R    +L  F P LA 
Sbjct: 741 TAIAALMELLNALYEYRHKHAPSPVYK--------------RAVRYYLQMLAPFAPHLAE 786

Query: 472 KIFDIL 477
           +++  L
Sbjct: 787 EVWHWL 792


>gi|260771002|ref|ZP_05879931.1| valyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260614239|gb|EEX39429.1| valyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 953

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 138/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDAQGNVYVGRNEDEVRADNNIPADVALSQDEDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             D  K    P+++ V G DI+ F         +           +P      +      
Sbjct: 492 KTDALKVFH-PSEVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVTKRTGNMMQPQLAAKIEKNTRKTFENGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVMMNTEEQDCGFGAGA 667

Query: 382 AFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                 +D+ I S      +   E++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELDYLLADKWIESQFELAAKAFNEHIDNYRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K +  +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGSEAQQRATRRTLITVLEKTLRLAHPVLPYITETIWQSIKPLVDGVEGDTIMLQALPQ 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKDVKGHMWHFRYPL 204


>gi|94266584|ref|ZP_01290267.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93452779|gb|EAT03314.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+AR+ R+ G +V+   G D  G     AA
Sbjct: 34  GRAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVVHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N    R     L +SY  D  + T +  ++   ++ + K+  KG  Y
Sbjct: 94  IKHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFFLKMLKKGLAY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +    +    +++V  GA           V   + +G+F +++AY ++LL+  
Sbjct: 154 RKLTTVNWCETCQTVLANEQVINGA----CWRCDQAVSQRQMQGWFLKITAYAEELLAGC 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P +   +           +G
Sbjct: 210 DNLPGWPEKVLTMQRNWIGKSTG 232



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 123/348 (35%), Gaps = 43/348 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E+ G           +L    +  +         E       
Sbjct: 427 WGISRQRYWGTPIPIIHCEKCGVQPVAEKDLPVVLPTEVNFDQSGKSPLHTLESFINTSC 486

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                +  R+T         D              Y     +    D   A +W P D +
Sbjct: 487 PACGGAARRET---------DTMDTFMESSWYFARYTCPDSHQAPLDKPAADYWLPVDQY 537

Query: 262 VIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   F         LS + P    + + G ++  G K+SKS GNV+DP
Sbjct: 538 IGGVEHAILHLLYSRFFTKVLRDLGYLSIDEPFT-NLLTQGMVIKDGAKMSKSKGNVVDP 596

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+IE+ G D +R F +      +D  ++  G++         G    +SR    +L + 
Sbjct: 597 NELIEQYGADTVRLFSLFAAPPERDLEWNHQGVE---------GAFRFLSRIHRFVLDNR 647

Query: 374 DGMIPT----PGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYF 428
           + +       P A  E+D ++     + ++++ ++++N    + A++ V+ L    +   
Sbjct: 648 EMLCAADEELPAAPNEADRALHRKTHQTIRKVSQDIENSFQFNTAISAVMELS---NTLL 704

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                       PD       VT   ++ +  LL   VP L  ++++ 
Sbjct: 705 SLNA--AGANQQPD-----PAVTRRAVQTMLTLLFPMVPHLCAELWEA 745


>gi|319899419|ref|YP_004159516.1| Leucyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403387|emb|CBI76951.1| Leucyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 874

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 80/208 (38%), Gaps = 6/208 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           EREK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 32  EREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  KV+  +N    R     L  S D      T +  ++   ++L+     KG I 
Sbjct: 92  VQNNVHPKVWTYENITVMRKQLKQLGFSLDWSREFATCDVEYYHRQQMLFLDFYQKGLIS 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +FF++S + D LL+  
Sbjct: 152 RKVAKVNWDPVDQTVLANEQVVDG----CGWRSGALVEQRELTQWFFKISDFSDDLLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS 208
           E    +   +    +       GL    
Sbjct: 208 EKLDRWPEKVRIMQKNWIGKSQGLLIRW 235



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 134/397 (33%), Gaps = 49/397 (12%)

Query: 97  TTEKRHHDT--CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           T + R HD    R  +            C        D      D+V     G      +
Sbjct: 430 TVQFRLHDWGISRQRYWGCPIPMIHCTACGVVPVPRADLPVVLPDDVTFDQPGNPLARHN 489

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
              +W +        SA ++           +             +   +    L  + +
Sbjct: 490 ---EWQKVVCPSCGQSAKRETDTMDTFVDSSWYYARFTTPHAQEPIDQKIAAQWLPVQQY 546

Query: 215 DWGIKI-----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLH 261
             GI+                + I YV +D     L T G + +      + W  PAD+ 
Sbjct: 547 IGGIEHAILHLLYARFFTRAMKMIGYVSVDEPFKGLFTQGMVVHETYRDDQGWVSPADIV 606

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           V+ KD              +  L    +V          EK+SKS  NVIDP ++I   G
Sbjct: 607 VVEKD----------GRRCAYKLTDRSEVMIGSI-----EKMSKSKKNVIDPDDIIASYG 651

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D +R+F++ +    +D  + + G++          +  LV+ S   +LK+        G
Sbjct: 652 ADTIRWFMLSDSPPERDVIWTESGIEGAHR--FVQRVWRLVALSAP-VLKEITPCAGQKG 708

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           A  E  ++      R L  + ++++    +RA+A++  L++ ++ + +  +         
Sbjct: 709 AALELSKA----AHRTLCAVGDDLEKLAFNRAIARLYELLNVMNSFLNNIE------NAE 758

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           D     +    + +     ++   +P LA +   +L 
Sbjct: 759 DEMKFAMR---QAMDFFIAMIAPMMPHLAEECHAVLG 792


>gi|283796363|ref|ZP_06345516.1| isoleucine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075769|gb|EFE13133.1| isoleucine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091473|emb|CBK77580.1| isoleucyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 1045

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/464 (11%), Positives = 137/464 (29%), Gaps = 24/464 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    D  G+               F  +         +   + +      
Sbjct: 335 KVGRNYDLPFVQLVDAKGEMT-----KETPWAGTFCKKADPLVLKDLEERGLLF------ 383

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
           +      +    W+  +      +  +    +   +    ++            G++ + 
Sbjct: 384 SAPNFEHSYPHCWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTINWIPESIGKGRFGDW 443

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N             +++
Sbjct: 444 LENVQDWGVSRNRYWGTPLNIWECECGCQHSVGSIEELKSMSDNCPDDIELHRPFIDAVT 503

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            +    G ++   P+ ++  W D+ +       Y         + +PAD      D    
Sbjct: 504 IRCPKCGKEMHRVPE-VIDCWFDSGSMPFAQHHYPFENKELFEQQFPADFISEAVDQTRG 562

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + LL    P    +         G+K+SKS GN +DP + +   G DA+R++
Sbjct: 563 WFYSLLAISTLLFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALATYGADAIRWY 622

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTES 386
                A      +    + +     +           +   + ++D    T         
Sbjct: 623 FYINSAPWLPNRFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDNFDATKYTLEYDKLPVM 682

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++E+  N+ N  I  A   +   V ++ + Y    +     K       
Sbjct: 683 DKWLLSKLNTLIKEVDSNLGNYRIPEAARALQDFVDDMSNWYVRRSRERFWAKGMEQDKI 742

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  ++ +    +P +   I+  L    +    +S+
Sbjct: 743 NAYMTLYTALVTVSKVAAPMIPFMCEDIYQNLVRNIDKTAPESV 786



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE             N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D    T     
Sbjct: 96  VEKMLGLDGKEQIEQYGLEPFIGHCKESVWKYKGMWEDFSATVGFWADMDHPYVTYHNDF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKQIWEKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|194290700|ref|YP_002006607.1| leucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|193224535|emb|CAQ70546.1| leucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 879

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 7/235 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 42  KEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGWDAFGMPAENA 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 102 ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGIA 161

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y ++LL  
Sbjct: 162 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITEYAEELLGD 217

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                 +   ++   +       G++         + G  I D   Y+     D 
Sbjct: 218 L-DGLGWPERVKVMQQNWIGKSVGVRFAFTHDIPGEDGKPINDGKLYVFTTRADT 271



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 117/358 (32%), Gaps = 44/358 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 485 TGNPLAKDPRFLQCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDADTMVD-ARND 541

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 542 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFANLLTQGMVL----NETFY 597

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   +             + A L    +    G I    EK+S
Sbjct: 598 REDASGKKHWYNPADVDVQTDE---------RGRPMGATLKADGQPVVIGGI----EKMS 644

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F++      +   +   G++    +     + N    
Sbjct: 645 KSKNNGIDPQALIDQYGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWNYGYA 702

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           + + I     G      A       +      VL++   + Q    +  ++  + +++ +
Sbjct: 703 NAAAIRDGAAGAPGADDA------ELRREIHGVLKQANYDYQRIQYNTVVSATMKMLNAL 756

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D                D  +       E    L  +L   VP + + +++ L  A E
Sbjct: 757 D----------------DAKTASPAARRECFGILLRVLYPVVPHITHGLWEQLGYAAE 798


>gi|114586465|ref|XP_001147524.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|114586467|ref|XP_001147676.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 3 [Pan
           troglodytes]
 gi|114586469|ref|XP_001147749.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 4 [Pan
           troglodytes]
          Length = 903

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIKGMQAHWIGDC 276



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 108/329 (32%), Gaps = 69/329 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          + + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDHKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 622 SVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   +  +++         + V+ +
Sbjct: 680 -VKTDALPGVLRWQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE---VIR 456
           +  +  ++  ++ A++Q++ L + + +                 + +V+  + E    + 
Sbjct: 739 VTTHFTEDFSLNSAISQLMGLSNALSQ----------------ASQSVILHSPEFEDALC 782

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++I+  L +     C
Sbjct: 783 ALMVMAAPMAPHVTSEIWAGLALVPRKLC 811


>gi|13473467|ref|NP_105034.1| leucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|32171580|sp|Q98EU7|SYL_RHILO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14024216|dbj|BAB50820.1| leucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 875

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 6/208 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  KPKYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN    R+   V+ +S D      T +  ++   ++L+    +KG + +
Sbjct: 93  QNKVHPKEWTYQNIATMREQLKVMGLSLDWAREFATCDVDYYHRQQMLFLDFVEKGLVTR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   E
Sbjct: 153 KSSKVNWDPEDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLLDSLE 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSL 209
              E+   ++   +       GL     
Sbjct: 209 GLDEWPEKVKLMQQNWIGRSEGLLIRWP 236



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 63/403 (15%), Positives = 120/403 (29%), Gaps = 76/403 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E+ G      A     L           P++R       VK 
Sbjct: 432 WGISRQRYWGCPIPMIHCEDCGVVPVPKADLPVKLPDDVDFDRPGNPLDRHPTW-RHVKC 490

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                   R+T         D              +     Y      +  ++ P D ++
Sbjct: 491 PQCGRDARRET---------DTMDTFVDSSWYFARFTAPWAYEPTDPRAANEWLPVDQYI 541

Query: 263 IGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKG---------- 300
            G +    H +Y   F  +                  + +  H      G          
Sbjct: 542 GGIEHAILHLLYSRFFTRAMRATGHVDLAEPFKGLFTQGMVVHETYRVGGASNNGRWLSP 601

Query: 301 ----------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
                                       EK+SKS  N + P ++ +  G D  R+ ++ +
Sbjct: 602 AEVRIEDAEGKRRAIEIATGEEAAIGSLEKMSKSKKNTVSPEDITDGYGADTARWLMLSD 661

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                D  +  DG         A+     + R VS   +   G+ P      E+  ++  
Sbjct: 662 SPPEGDVEWTDDGAAG------AHRFMQRIWRLVSTAAETLAGVKPAAADSGEAG-AVRK 714

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              ++L+ + E+++    +RA+A++  L + +    +        K +P     +     
Sbjct: 715 ATHKILKAVGEDIEKLGFNRAIARIYELANVLTTPLNQVA---EGKADP----ALQGACR 767

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
           E +  L  L+   +P LA + ++ L   D    R + + D  L
Sbjct: 768 EAVEILVHLIAPVMPHLAEECWETLGGTDLVAERPWPAFDPAL 810


>gi|307721380|ref|YP_003892520.1| valyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979473|gb|ADN09508.1| valyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 875

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 78/387 (20%), Positives = 146/387 (37%), Gaps = 57/387 (14%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++E Y    E +K   G  Y    N V+    + +F R     DK +    +      P 
Sbjct: 328 QEEGYIVKIEDHKHQVGHCYR-CKNVVEPYISKQWFVRKEV-ADKSIEKTNAGEAKFFPP 385

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY-------------------- 226
              N   +     L+D  +SR+   WG +I      D  +                    
Sbjct: 386 HWIN-SYNSWMGDLRDWCISRQ-LWWGHQIPVFYCADCDHEWATGNEHPTECTKCASKNI 443

Query: 227 -----IMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH-- 271
                ++  W  +     +T G+                  F+P  L + G DIL F   
Sbjct: 444 SQDPDVLDTWFSSALWPFSTLGWGHGDTEMDKLFKSEDMKDFYPNSLLITGFDILFFWVA 503

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +       +  LP  K ++ H  +  + G+K+SKS GNVIDP++++ +   D LR+ L 
Sbjct: 504 RMMMMGEHFNGELPF-KHIYLHALVRDEHGQKMSKSKGNVIDPLDMVNKYSADVLRFTLA 562

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G+D    +D L+  +N +  N + N  S+ + M ++ +  M       T+    +
Sbjct: 563 ISAAQGRDIRMSQDKLE--LNRNFTNKLYN-ASKFLQMNVETFPDMNGFCVE-TDLGRYM 618

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +S  +   +E+R  +     + A   +   +       +    W ++ +  D+AS V   
Sbjct: 619 MSRLNFATKEVRAYLDEYKFNDAALTMYRFLW------NEFCDWGIELSKADKASIVE-- 670

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
              + ++   LL  F+P +   ++  L
Sbjct: 671 LGAIFKEAMKLLHPFMPFITEHLYHEL 697



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 64/169 (37%), Gaps = 18/169 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I         + HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 35  EEDKNFSIMMPPPNVTGRLHIGHALTFTLQDIITRYKRMDGYKTLWQPGTDHAGIATQNV 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + ++++    +    + +S  ++    T +    
Sbjct: 95  VEKQLLEQGITKEEIGREAFLEKVWAWKEESAGIMTEQLRHMGVSPAWERERFTMDAGLQ 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
            + +  +  + ++G I +G Y   +   D A  + +  ++  +G++Y+ 
Sbjct: 155 KSVKEAFVHLYNEGLIVRGNYMVNWCTHDGALSDIEVEHEEENGKFYHM 203


>gi|218529833|ref|YP_002420649.1| leucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522136|gb|ACK82721.1| leucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 875

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 74/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N    R     + +S D    I T +  ++   + ++     KG + +
Sbjct: 106 ERKVNPREWTYANIATMRGQLQSMGLSLDWSREIATCDPDYYKHQQRMFLDFLGKGLVTR 165

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   L    +
Sbjct: 166 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLHDALD 221

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
               +   +            GL+  
Sbjct: 222 GLERWPEKVRLMQRNWIGRSEGLEVR 247



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAAR 693

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   ++        P   A    D  +     + L  + E+++    +R +A + +L
Sbjct: 694 FVQRVWRLVHGATAANGPGGTA----DAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +D                 R         E  R L  L+   +P LA + + +L   
Sbjct: 750 ANALD--------------EGLRGGASKAAAGEAARILVQLIAPMMPHLAEESWRVLGGE 795

Query: 481 D--ENRCFQSLDQRL 493
                  +   DQ L
Sbjct: 796 GLVAETAWPVADQAL 810


>gi|54307696|ref|YP_128716.1| valyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46912119|emb|CAG18914.1| putative Valyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 978

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/419 (18%), Positives = 142/419 (33%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 399 IEPMLTDQWYVRTAPLAAPAVKAVEDGQIQFVPKQYENMYFAWMRD-VQDWCISRQ-LWW 456

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 457 GHRIPAWYDNYGKVYVGRTEDEVREKNNLASVVVLRQDDDVLDTWFSSALWTFGTQGWPE 516

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           N D  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 517 NTDALKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEEGNAQVPFKTVYMTGLIRDE 575

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 576 NGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMMQPKLAAKIEKQTRKAFEGGIEPYG 635

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 636 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMAEGA 692

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 693 ELEFSLADQWITSQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 751

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +     Y  + V+ +   L    +P +   I+  +      V  E    Q+L Q
Sbjct: 752 KGTEAQQRATRYTLITVLEKTLRLAHPILPYITESIWQSVKPLVDGVEGETIMTQALPQ 810



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 55  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 114

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 115 VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGL 174

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 175 SAATQEVFVRLFEEDLIYRGKRLVNWDPKLHTAISDLEVESKDKKGFMWHFRYPL 229


>gi|114319716|ref|YP_741399.1| valyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226110|gb|ABI55909.1| valyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 917

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 113/355 (31%), Gaps = 48/355 (13%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL--SLSRKTFDWGIKIPDDP 224
           +  + Y+             I    R                    R   + G       
Sbjct: 383 WDRTYYEWMNNIQDWCISRQIWWGHRIPAWYDAEGHVYVGRTEEEVRARHNLGNVPLHQD 442

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ D  +  +  F+P  + V G DI+ F    +         
Sbjct: 443 EDVLDTWFSSALWPFSTLGWPDETEALRT-FYPTSVLVTGFDIIFFWVARMIMMGLHFMD 501

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV---------------------- 320
           ++P  +           G+K+SKS GNV+DP+++IE +                      
Sbjct: 502 DVPFREIYIHGLVRDPDGQKMSKSKGNVLDPLDIIEGIELEELVAKRTSGLMQPQMAKRI 561

Query: 321 ---------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+        G+D  +D          +  N I N  +R 
Sbjct: 562 EKATRKQFPDGIPAHGTDALRFTFASLATTGRDVVFDLGR--AEGYRNFCNKIWN-AARY 618

Query: 366 VSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           V M  + +D  +       T +D  I+S   R    +RE +    +  A   +   + + 
Sbjct: 619 VLMNTEGHDTGVAAEDVKLTVADRWIISQLQRTELRVREALDGYRLDLAAQAIHEFIWDE 678

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  KP   +  +P          V V+  +  L    +P +   ++  +
Sbjct: 679 YCDWYLELSKPVLNQSDDPALLRGTRRTLVRVLEAVLRLTHPIMPFITEAVWQQI 733



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G       
Sbjct: 29  EGEPYCIMIPPPNVTGTLHMGHAFQDTIMDALIRYQRMCGRNTLWQPGTDHAGIATQMVV 88

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                                 +R  R M   +D S + F  T ++  
Sbjct: 89  ERQLEAEGKSRFDLGREKFLERVWQWKAESGGTITRQLRRMGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++ ++ + G IY+G     +        +D EV    +  +      P+
Sbjct: 147 SRAVREVFVRLYEDGLIYRGKRLVNWDPVLHTAVSDLEVTSQEEQGHIWHMRYPI 201


>gi|240138137|ref|YP_002962609.1| leucine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008106|gb|ACS39332.1| leucine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 875

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 74/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N    R     + +S D    I T +  ++   + ++     KG + +
Sbjct: 106 ERKVNPREWTYANIATMRGQLQSMGLSLDWSREIATCDPDYYKHQQRMFLDFLGKGLVTR 165

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   L    +
Sbjct: 166 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLHDALD 221

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
               +   +            GL+  
Sbjct: 222 GLERWPEKVRLMQRNWIGRSEGLEVR 247



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAAR 693

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   ++        P   A    D  +     + L  + E+++    +R +A + +L
Sbjct: 694 FVQRVWRLVHGATAANGPGGTA----DAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +D                 R         E  R L  L+   +P LA + + +L   
Sbjct: 750 ANALD--------------EGLRGGASKAAAGEAARILVQLIAPMMPHLAEESWRVLGGE 795

Query: 481 D--ENRCFQSLDQRL 493
                  +   DQ L
Sbjct: 796 GLVAETAWPVADQAL 810


>gi|90421007|ref|ZP_01228911.1| leucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334785|gb|EAS48561.1| leucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 872

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 89/236 (37%), Gaps = 11/236 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA  
Sbjct: 34  EKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYRRAKGFNVLHPMGWDAFGMPAENAAMQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V  + +  QN    R     + +S D      T +  ++   ++L+     KG  Y+ 
Sbjct: 94  NKVHPREWTYQNIATMRGQLKSMGLSLDWSREFATCDVEYYHRQQMLFLDFLAKGLAYRK 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     +++V  G   +        V+  E   +FFR++ + D LLS  + 
Sbjct: 154 KSKVNWDPVDMTVLANEQVIDGKGWRSGAD----VEQRELTQWFFRITDFADDLLSALDH 209

Query: 183 HPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            P +   +    +       G L   +L   T   GI    D   +     D L  
Sbjct: 210 LPGWPEKVRLMQKNWIGKSEGLLVRWALDAATKPEGI----DDVTVFTTRPDTLFG 261



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 79/402 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L       +   P++R          
Sbjct: 434 WGISRQRYWGCPIPVLHCEACGVVPEARENLPVKLPDDIDFEKPGNPLDRHPT------- 486

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPA 258
                         G     +    M  ++D  + Y          + +  +    + P 
Sbjct: 487 -----WRDATCPQCGGTAKRETD-TMDTFVD-SSWYFARFTAPQAHEPTDPQAANAWLPV 539

Query: 259 DLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKG----------- 300
           D ++ G +    H +Y              A     K +F+ G ++H+            
Sbjct: 540 DQYIGGIEHAILHLLYSRFFVRAMRECGHVALDEPFKGLFTQGMVVHETYRDGREWVAPV 599

Query: 301 ---------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                      EK+SKS  NV+DP ++I   G D  R+F++ + 
Sbjct: 600 DVAITEGEGTRTATRLSTGSAIEIGGIEKMSKSKKNVVDPDDIIASYGADTARWFMLSDS 659

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  + + G++          +  LVS +   I     G   +P +  E+  +I   
Sbjct: 660 PPDRDVIWTEAGVEGAHR--FVQRLWRLVSETAPRIA----GADASPQSEDEAVLTIRRA 713

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             R    + ++++    ++A+A++  LV+       A        ++P   +       E
Sbjct: 714 AHRAAAGVADDIERLGFNKAVARIYELVNT----LAASVSGVSADSDPALKAAAR----E 765

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRC--FQSLDQRL 493
            +  L  L+   +P LA + +  L +        +  +D  L
Sbjct: 766 ALTILVRLIAPMMPHLAEECWTTLGMDGLAAAAPWPDVDPAL 807


>gi|83746765|ref|ZP_00943813.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207744312|ref|YP_002260704.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83726534|gb|EAP73664.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206595717|emb|CAQ62644.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 877

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 6/211 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCDPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITDYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +           +   I   +        S
Sbjct: 212 LDPLGWPERVKLMQQNWIGKSEGVRFAFPHS 242



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 120/362 (33%), Gaps = 50/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  + +      G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 TGNPLNKDSRFLSCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAGTMVD-GRND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    PAD+ V   +             + A L    +    G +    EK+S
Sbjct: 592 REDAAGKKHWINPADVDVQTDE---------RGRPIGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   ++  G++         G    + R
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWNDAGVE---------GASRFLRR 689

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +  +   D +    G       T++D ++      VL++   + +    +  ++  + 
Sbjct: 690 MWNFGVAHGDAIRAGHGNGVVDGATDADRALRRELHTVLKQANYDYERLQYNTVVSATMK 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++      +  K       +  R         E    L  +L   VP + + ++  L  
Sbjct: 750 MLNA----LEGAKD---AGVDARR---------EGFGILLRVLYPVVPHITHVLWQELGY 793

Query: 480 AD 481
           A 
Sbjct: 794 AG 795


>gi|310777973|ref|YP_003966306.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747296|gb|ADO81958.1| leucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 869

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 6/201 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+   + YP+ + H+GH     I DV+AR+ ++ G +VL   G D  G     
Sbjct: 29  VEGKENYYVLEMLPYPSGKLHMGHVRNYTIGDVIARYKKMKGYNVLHPMGWDSFGLPAEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G    V+   N  N       L  SY  D  I +    ++   + ++K++ +KG 
Sbjct: 89  AAIQNGAHPAVWTKSNIENMTTQLKSLGFSYDWDREIASYRDDYYRWNQWIFKRMYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK   S  +    +    +++V    DG+ +      V   E E ++F+++ Y D+LL 
Sbjct: 149 VYKKKSSVNWCPDCQTVLANEQV---EDGKCWRHSKTDVIQKELEQWYFKITNYADELLE 205

Query: 179 YYESHPEFILPIERRNEVISF 199
                 +   P +      ++
Sbjct: 206 G-HKELKGGWPEKVITMQKNW 225



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 62/302 (20%)

Query: 235 LTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFHAIYWPAFL--------LS 281
            + Y        N D    K     ++P D ++ G +    H +Y   F         LS
Sbjct: 507 SSWYFLRYCDPKNTDLPFDKDIADGWFPVDQYIGGVEHAVMHLLYARFFHKVLRDLGLLS 566

Query: 282 ANLPLP-------------------------------KKVF---SHGFILHKGEKISKSL 307
            N P                                  KV    +   ++ K EK+SKS 
Sbjct: 567 TNEPFKRLLTQGMVLGPSYFSANENRYLYSEEVEISGDKVLAKTTGEELVVKVEKMSKSK 626

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DP  ++   G D  R F +      K+  ++++GL             N V R VS
Sbjct: 627 NNGVDPENIVATYGADTARLFTMFASPPEKELEWNENGLAGSYR------FLNRVWRMVS 680

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDR 426
                ++          ++D++IL    + ++++ E+++N    + ++A  + L++E   
Sbjct: 681 ESKAFFEAGSINLENLNKADKAILRKLHQTIKKVTESIENDYHFNTSIASNMELINE--- 737

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                K   L+K +    S    +  E + ++ I+L  FVP + ++++  L   +E   F
Sbjct: 738 -LQDYKVNVLEKGDI--TSESKKLFTEAVNKMVIMLSPFVPHICDELWSELG--NEGFLF 792

Query: 487 QS 488
           + 
Sbjct: 793 EE 794


>gi|114769323|ref|ZP_01446949.1| valyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550240|gb|EAU53121.1| valyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 956

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 130/350 (37%), Gaps = 18/350 (5%)

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
            ++ ++        Q +     PV W + EG  +  ++ ++ +      +          
Sbjct: 433 FHWLENIEPWCISRQLWWGHQVPV-WNDLEGNAYCATSEEEAIEKALSKYQSKY---PNA 488

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
              I    +   +           I +  DP  ++  W  +      T G+ +N    + 
Sbjct: 489 KIKILVDDNPNNNSLDEDDGQTKTIVLSRDPD-VLDTWFSSGLWPFGTLGWPENSKELER 547

Query: 254 KFWPADLH---VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
            +   +L+   + G DI+ F    +          +P  + V+ H  +  + G+K+SKS 
Sbjct: 548 YYTSNNLNRTLITGFDIIFFWVARMMMMGIETMGKVPF-ETVYVHPLVRDEHGKKMSKST 606

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+DP+++I++ G DA+R+ L    A G+D    ++ ++     +    + N  +R   
Sbjct: 607 GNVMDPLDLIDKYGADAVRFTLTAMAAMGRDLKLSENRIEG--YRNFGTKLWN-ATRFAE 663

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
                 +            ++ I+   + V + +  +++    + A   +   V     D
Sbjct: 664 FNEASPNNDFDPKSVKQTLNKWIIGETALVREAVDNSLEQYRFNDAANALYVFVWNKVCD 723

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            Y +  KP  L+  +             V+ Q  ILL   +P +   ++D
Sbjct: 724 WYVELSKP-LLQGEDLTAVLETKETLAWVLDQSYILLHPIMPFITESLWD 772



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 60/195 (30%), Gaps = 36/195 (18%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA---- 65
            I  PN     H+GHA+   + D+L R+HR+ G D L+  GTD  G       +      
Sbjct: 42  MIPPPNVTGVLHMGHAFNNTLQDILIRWHRMRGFDTLWQPGTDHAGIATQMVVERELAKN 101

Query: 66  -------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-------------- 98
                              + +Q+     +    L  S D F RT               
Sbjct: 102 NEPSRSELGRDAFLEKVWKWKEQSGGTIINQLKRLGASCD-FSRTAFTMAGAHGDTKTGH 160

Query: 99  --EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                 HD     +    DKG IYKG     +    E   +D EV       +      P
Sbjct: 161 ENSANFHDAVLKTFVDFYDKGLIYKGKRLVNWDPHFETAISDLEVENIEVDGHMWHFKYP 220

Query: 157 VQWMEEEGYFFRLSA 171
           +   E   Y  +   
Sbjct: 221 LADGETYTYIEKDED 235


>gi|81300729|ref|YP_400937.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123556548|sp|Q31LW9|SYL_SYNE7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81169610|gb|ABB57950.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 865

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+   H+GH     I D +AR  R  G  VL   G D  G     AA
Sbjct: 47  DRPKFYALSMFPYPSGNLHMGHVRNYTITDAIARVKRRQGFRVLHPMGWDAFGLPAENAA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + GV    +  QN    R+    L +SY  D  + T    ++   + L+ +  + G  Y
Sbjct: 107 IDRGVQPADWTYQNVAQMREQLKQLGLSYDWDREVTTCSPDYYRWTQWLFLQFFEAGLAY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V   ++G+ + +    V+  + + +F +++ Y ++LL   
Sbjct: 167 QKEATVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERRQLKQWFLKITDYAEELLQDL 223

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +           +G
Sbjct: 224 DQLTGWPERVRLMQANWIGKSTG 246



 Score =  101 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 103/299 (34%), Gaps = 69/299 (23%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y   +         K   W P D +V G +    H +Y   F   
Sbjct: 508 DTMDTFMCSSWYYLRYSDASNPEIAFTKDKVNDWLPVDQYVGGIEHAILHLLYSRFFTKV 567

Query: 280 ------LSANLPLP-------------------KKVFSHGFILHK--------------G 300
                 LS + P                     K V S                      
Sbjct: 568 LRDRGLLSFDEPFKRLLTQGMVQGLTYKNPKTGKYVPSDRISDPSQPVDPDTGDRLEVFF 627

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  V++  G D  R F++ +    KD  +D   ++         G   
Sbjct: 628 EKMSKSKYNGVDPARVLDRYGADTARMFILFKAPPEKDLEWDDADVE---------GQFR 678

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVIS 419
            ++R   ++ +    +  T  A  ++++ +       +Q + E+++    ++ A+A+++ 
Sbjct: 679 FLNRVWRLV-QTASQVEATTAADDKAEKDLRRAVHTAIQAVTEDLEEDYQLNTAIAELMK 737

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L + ++   DA  P      +P          +E ++ L +LL  F P +A +++  L 
Sbjct: 738 LTNALN---DAPMP-----GSPAY--------LEGVQTLVLLLAPFAPHIAEELWQQLG 780


>gi|237715648|ref|ZP_04546129.1| valyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262408657|ref|ZP_06085203.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294646688|ref|ZP_06724313.1| valine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294807118|ref|ZP_06765936.1| valine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229444357|gb|EEO50148.1| valyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262353522|gb|EEZ02616.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292637976|gb|EFF56369.1| valine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294445684|gb|EFG14333.1| valine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 878

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 126/366 (34%), Gaps = 59/366 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAALTMEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDTLCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             N +  +  +I    +G   IP P     + +           E+ +      +  AL 
Sbjct: 584 FCNKIWNAFRLIKGWTNGKGSIPVPPDAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALM 643

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P         +  + +    +L  LL  F+P +  
Sbjct: 644 LVYKL------FWDEFSSWLLEIVKPAYGQPINGFIYSMVLSSFERLLELLHPFMPFITE 697

Query: 472 KIFDIL 477
           +++  L
Sbjct: 698 ELWQQL 703



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLASQGIKKTDLSRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + DKG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLFDKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|299140744|ref|ZP_07033882.1| valine--tRNA ligase [Prevotella oris C735]
 gi|298577710|gb|EFI49578.1| valine--tRNA ligase [Prevotella oris C735]
          Length = 898

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 125/374 (33%), Gaps = 51/374 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    S      P + +N         +KD  +SR+   
Sbjct: 365 PIEPKLSTQWFLKMQHFADLALGPVMSDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 422

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     +  W  +   
Sbjct: 423 WGHRIPAYYFTNTDGKRDFVVAATIEEALAKAKTKNSTLTVNDLEQESDCLDTWFSSWLW 482

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    +++PD  +   ++P    V G DI+ F    +    +      P     F+  
Sbjct: 483 PISVFDGVNHPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRKTYPFKHVYFTGI 542

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 543 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 599

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++       I  P     + E I +    V  E++E  +   I  AL
Sbjct: 600 ---FNNKIWNAFRLVKGWQAADIEQPTCNKLAVEWIAAKLKEVNAELQEQFKQYRISEAL 656

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  L  +     Y +  KP  +              T+     L  +L  F+P +  +
Sbjct: 657 MTVYKLFWDEFSSWYLEMVKPAYINGEAQPIDQKTYDATIGFFDNLLKMLHPFMPFITEE 716

Query: 473 IFDILFVADENRCF 486
           ++  +    E    
Sbjct: 717 LWQHIADRKEGESI 730



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        +  ++          L  S  +D    T ++    
Sbjct: 92  VGKLAEKGIKKTDLSREEFLEHAWDWTHEHGGIILKQLRKLGCSCDWDRTAFTMDETRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 GVIKVFCDLYEKGLIYRGVRMVNWDPKAQTALSDEEVIYKDEH 194


>gi|255994248|ref|ZP_05427383.1| isoleucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993916|gb|EEU04005.1| isoleucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 1040

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 135/404 (33%), Gaps = 18/404 (4%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  Y     L+DE   N+  V    D        N ++ + +  +    S Y    
Sbjct: 401 YYAKPSWYIEMTKLKDELVSNNKTVKWHPDFVGLKRFENWLENVND--WAISRSRYWGTP 458

Query: 177 LSYYES---------HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI-KIPDDPQY 226
           +  +                L  E  +  +      L    + +         + +    
Sbjct: 459 MPVWRCDSCGEVKCVGSREELKREAVSSEVDIDNLDLHRPFIDKVKLKCSCGAVMNRVTD 518

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +M  W D+ +       Y    +    + +PA     G D     F+++   +  +    
Sbjct: 519 VMDCWFDSGSMPFAQFHYPFENEEKFKESFPASFICEGIDQTRGWFYSLMAISTFIMGKA 578

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G+K+SKS GN +DP E+  + G D+LR++++          +D++
Sbjct: 579 PYKNVLVNDLILDKHGKKMSKSKGNTVDPFELFSKYGSDSLRWYMLYASPAWSPTKFDEE 638

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIR 402
           GLK+      +         ++     D D +          E D  I+S  + ++  + 
Sbjct: 639 GLKEIHQKCFSTLKNVYTFFALYANQDDVDPLTYDIPVKNRPELDRWIISRFNAMVDYVT 698

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +M      +++  + + +     + Y    +    +    D   +V   T E++  L+ 
Sbjct: 699 TSMDEYDHMKSVRAIQAFITEDLSNWYIRRARRRFWQSEMDDSKKSVYLTTYEMLLGLSK 758

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           ++  F P ++  ++  L            +  +    +L +  +
Sbjct: 759 IMAPFTPFISEDMYLKLTRGSALESVHLENYPVPDKTLLEEDIE 802



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E           N +P I H     + D + R+  + G  V    G D HG  +    
Sbjct: 36  GKEPFIFYEGPPTANGKPGIHHVIARTLKDSVCRYKTMKGFKVERKAGWDTHGLPVEIEV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHH 103
           +                       +  V +  + ++DM   +    D      T +  + 
Sbjct: 96  EKQLNLTSKQEIEDYGIENFNEKCRESVFKYEKIWQDMTKKMAYLVDLENPYITLDNDYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++C  + K+  DKG +Y+G     Y  R        EV +G  
Sbjct: 156 ESCFWILKQFFDKGFVYEGHKVLPYCPRCGTGLASHEVAQGYK 198


>gi|225850337|ref|YP_002730571.1| leucyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646026|gb|ACO04212.1| leucyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 608

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y+     YP+ + H+GH     I DV+ R+ R+ G + L   G D  G     AA
Sbjct: 31  DKDKFYVLEMFPYPSGRIHMGHVRNYAIGDVVNRYLRMKGKNTLHPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +GV    +  +N    +     L  SYD    + T    ++   + ++ K+ +KG  Y
Sbjct: 91  IKSGVHPAKWTYENIDYMKKELKRLGFSYDWNREVTTCSPEYYRWNQWIFLKMYEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V +G           PV   E   +F R++ Y + LL   
Sbjct: 151 RKSAVVNWCPHDMTVLANEQVIEG----RCWRCDTPVVQKEIPSWFLRITDYAEVLLDDL 206


>gi|315023136|gb|EFT36149.1| Valyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 872

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 55/364 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++S      L    +      P + +N    +    ++D ++SR+   W
Sbjct: 350 IEPKISQQWFLKMSEIAKPALEVVMNDEIKFYPDKFKNT-YKYWMENIRDWNISRQ-LWW 407

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 408 GQQIPAYYYGEGENDFVVAENAEKALELAREKAQNPNLGLADLKQDEDALDTWFSSWLWP 467

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    L NP+  +   ++P    V G DI+ F    +          +P     F+   
Sbjct: 468 MSVFDGLLNPNSKEINYYYPTTDLVTGPDIIFFWVARMIMAGLEWRGKVPFKNVYFTGIV 527

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  DPIE+I++ G D++R  ++   A G D  +D+D + +    + A
Sbjct: 528 RDKQRRKMSKSLGNSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQ--GRNFA 585

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I N    +  ++        P      ++ E    +  + ++EI E  +   I  AL 
Sbjct: 586 TKIWN----AFRLVQGWKQENKPAGAVENQTIEWFGHLLDKTVKEINEQFEKFRISDALH 641

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  L+ +     Y +A KP   +  + +    V   T+    +L  LL  F+P L  ++
Sbjct: 642 LIYKLIWDDFCSWYLEAIKPNYGEGISKE----VYDKTIAYFEELMKLLHPFMPFLTEEL 697

Query: 474 FDIL 477
           +  +
Sbjct: 698 WQNI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 18/158 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           +    I           H+GH     I DVL R  R+ G +  +  GTD           
Sbjct: 33  KPPYTIVIPPPNVTGILHMGHMLNNTIQDVLIRRARMRGYNACWVPGTDHASIATEAKVV 92

Query: 62  --------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
                          +        +  +      +    L  S  +D    T E +  + 
Sbjct: 93  AKLKAEGINKSDISREEFLKHAWEWTHKYGGTILEQLKKLGCSCDWDRTRFTMEDKLSEQ 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +  + +KG IY+G     +    +   +D+EV  
Sbjct: 153 VIKSFVDLYNKGLIYRGYRMVNWDPEAKTNISDEEVIF 190


>gi|327482397|gb|AEA85707.1| leucyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 868

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNQVAPAKWTYENIAYMKAQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 207 DELDGWPEQVKTMQRNWIGKSRGM 230



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 111/393 (28%), Gaps = 89/393 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIIHCDSCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  +        K   D              Y +        D   A  W P D +
Sbjct: 480 -----ECTCPKCGAPAKRETDTMDTFVESSWYFARYASPNYDKGMVDPQAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLPKKVF-------SHGFILHKG------ 300
           + G +    H +Y   F            N P    +        ++   L  G      
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVSSNEPFKNLLTQGMVVAETYYRTLENGGKDWFN 594

Query: 301 -------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                          EK+SKS  N +DP  +I+  G D  R F+
Sbjct: 595 PADVEVERDAKAKVIGARLKTDGLPVEIGGTEKMSKSKNNGVDPQAMIDAYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++         G    + R   +        +P      A  + 
Sbjct: 655 MFASPPDMSLEWSDSGVE---------GASRFLRRVWRLAHAHVSAGLPGALDVAALNDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++       +++   ++ Q+   + A+AQV++L++ +      + P        DRA 
Sbjct: 706 QKAVRRAIHLAIKQASTDVGQHHKFNTAIAQVMTLMNVL-----EKAP---TAGEQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               +  E +  +A+LL    P + ++++  L 
Sbjct: 757 ----LLQEGLETVALLLAPITPHICHELWQQLG 785


>gi|313206180|ref|YP_004045357.1| valyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445496|gb|ADQ81851.1| valyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336375|gb|ADZ12649.1| Valyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 872

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 55/364 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++S      L    +      P + +N    +    ++D ++SR+   W
Sbjct: 350 IEPKISQQWFLKMSEIAKPALEVVMNDEIKFYPDKFKNT-YKYWMENIRDWNISRQ-LWW 407

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 408 GQQIPAYYYGEGENDFVVAENAEKALELAREKAQNPNLGLADLKQDEDALDTWFSSWLWP 467

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    L NP+  +   ++P    V G DI+ F    +          +P     F+   
Sbjct: 468 MSVFDGLLNPNSKEINYYYPTTDLVTGPDIIFFWVARMIMAGLEWRGKVPFKNVYFTGIV 527

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  DPIE+I++ G D++R  ++   A G D  +D+D + +    + A
Sbjct: 528 RDKQRRKMSKSLGNSPDPIELIDKYGADSVRVGILLSSAAGNDLLFDEDLMLQ--GRNFA 585

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I N    +  ++        P      ++ E    +  + ++EI E  +   I  AL 
Sbjct: 586 TKIWN----AFRLVQGWKQENKPAGAVENQTIEWFGHLLDKTVKEINEQFEKFRISDALH 641

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  L+ +     Y +A KP   +  + +    V   T+    +L  LL  F+P L  ++
Sbjct: 642 LIYKLIWDDFCSWYLEAIKPNYGEGISKE----VYDKTIAYFEELMKLLHPFMPFLTEEL 697

Query: 474 FDIL 477
           +  +
Sbjct: 698 WQNI 701



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 18/158 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           +    I           H+GH     I DVL R  R+ G +  +  GTD           
Sbjct: 33  KPPYTIVIPPPNVTGILHMGHMLNNTIQDVLIRRARMRGYNACWVPGTDHASIATEAKVV 92

Query: 62  --------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
                          +        +  +      +    L  S  +D    T E +  + 
Sbjct: 93  AKLKAEGINKSDISREEFLKHAWEWTHKYGGTILEQLKKLGCSCDWDRTRFTMEDKLSEQ 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +  + +KG IY+G     +    +   +D+EV  
Sbjct: 153 VIKSFVDLYNKGLIYRGYRMVNWDPEAKTNISDEEVIF 190


>gi|166711417|ref|ZP_02242624.1| leucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 880

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SEKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANITHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 263



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 74/513 (14%), Positives = 152/513 (29%), Gaps = 100/513 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQRWDATEWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDFGGAFEALAERFERKGQGQRRVNYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       D G  
Sbjct: 455 CPKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPDCGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+         +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNAREMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                     +
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIADTFYRDADNGGKDWINPADVEIQRDERGRVT 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GAVLIADGQPVHIGGTEKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEI 401
           G+         +G+   + R  + + K       +     A +   ++I       + ++
Sbjct: 681 GV---------DGMARFMRRLWAQVHKHVGEGAAVALDVAALSAEQKAIRRKTHETIGKV 731

Query: 402 RENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            ++   +   + A+A V+ L + + ++ DA        ++  RA     V  E +  + +
Sbjct: 732 SDDYGRRHSFNTAIAAVMELSNALAKFDDA--------SDQGRA-----VRQEALEAMVL 778

Query: 461 LLQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           LL    P  ++ ++ +L   +   EN  F   D
Sbjct: 779 LLNPITPHASHALWQVLGRGETLLENVAFPQAD 811


>gi|258622805|ref|ZP_05717823.1| Valyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258584993|gb|EEW09724.1| Valyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 953

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSALWTFGTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
                     P D+ V G DI+ F         +         A +P      +      
Sbjct: 492 KTPEMNVFH-PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D+LR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDSLRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEQDCGFAAGA 667

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
              ++ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 DLEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +        + V+ +   L    +P +   I+  +      V  +    Q+L Q
Sbjct: 727 KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQ 785



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++     IY+G     +  +     +D EV       +      P+
Sbjct: 150 YKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPL 204


>gi|157879483|pdb|1OBC|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Post-Transfer Editing Substrate Analogue
          Length = 814

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)

Query: 1   MKERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           MK ++   K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G  
Sbjct: 23  MKAKDLPGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLP 82

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISD 115
              AA   GV  K +   N R  ++   ++ I   +D  + T E  ++   + ++ K+ +
Sbjct: 83  AENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWE 142

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           KG  Y+      +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++
Sbjct: 143 KGLAYRAKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAER 199

Query: 176 LLSYYESHPEFILPIERRNEVISFVK 201
           LL   E           +   I   +
Sbjct: 200 LLKDLEGLNWPEKVKAMQRAWIGRSE 225



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 29/202 (14%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKS GN +     ++E G D  R  ++       +  + ++G++         
Sbjct: 629 LWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQ--------- 679

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R    + +D + ++ T G F        D  +       L+++ E+++    +
Sbjct: 680 GAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFN 739

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++  ++ +  Y         +K  P     V  V    IR    +L  F P LA 
Sbjct: 740 TAIAALMEFLNALYEY---------RKDRP-----VTPVYRTAIRYYLQMLFPFAPHLAE 785

Query: 472 KIFDILFVAD-ENRCFQSLDQR 492
           +++   +        +  LD++
Sbjct: 786 ELWHWFWPDSLFEAGWPELDEK 807


>gi|94263197|ref|ZP_01287014.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93456415|gb|EAT06535.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+AR+ R+ G +V+   G D  G     AA
Sbjct: 34  GRAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCGDNVVHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N    R     L +SY  D  + T +  ++   ++ + K+  KG  Y
Sbjct: 94  IKHGTHPAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFFLKMLKKGLAY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +    +    +++V  GA           V   + +G+F +++AY ++LL+  
Sbjct: 154 RKLTTVNWCETCQTVLANEQVINGA----CWRCDQAVSQRQMQGWFLKITAYAEELLAGC 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++ P +   +           +G
Sbjct: 210 DNLPGWPEKVLTMQRNWIGKSTG 232



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 105/263 (39%), Gaps = 38/263 (14%)

Query: 232 IDALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFHAIYWPAF-------- 278
               + Y       D+      K     + P D ++ G +    H +Y   F        
Sbjct: 503 FMESSWYFARYTCPDSHQAPLDKPAADYWLPVDQYIGGVEHAILHLLYSRFFTKVLRDLG 562

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ + P    + + G ++  G K+SKS GNV+DP E+IE+ G D +R F +      +D
Sbjct: 563 YLAIDEPFT-NLLTQGMVIKDGAKMSKSKGNVVDPNELIEQYGADTVRLFSLFAAPPERD 621

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVC 394
             ++  G++         G    +SR    +L + + +       P A  E+D ++    
Sbjct: 622 LEWNHQGVE---------GAFRFLSRIHRFVLDNREMLCAADEELPAAPNEADRALHRKT 672

Query: 395 SRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++++ ++++N    + A++ V+ L    +               PD       VT  
Sbjct: 673 HQTIRKVSQDIENSFQFNTAISAVMELS---NTLLSLNA--AGANQQPD-----PAVTRR 722

Query: 454 VIRQLAILLQAFVPKLANKIFDI 476
            ++ +  LL   VP L  ++++ 
Sbjct: 723 AVQTMLTLLFPMVPHLCAELWEA 745


>gi|86605939|ref|YP_474702.1| leucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|123751807|sp|Q2JV13|SYL_SYNJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86554481|gb|ABC99439.1| leucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 873

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 32  ESRKFYALSMFPYPSGSLHMGHVRNYTITDVIARHKRMQGYAVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+    +  QN    RD    L +SYD    I T    ++   + L+ +    G  Y
Sbjct: 92  IDRGIPPAKWTYQNIAQMRDQLQRLGLSYDWEREITTCAPDYYKWTQWLFLQFFKAGLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V               V+    + +F +++AY D+LL+  
Sbjct: 152 QKEAPVNWDPVDQTVLANEQVDAE---GRSWRSGALVEKRLLKQWFLKITAYADQLLADL 208

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E    +   +    E       G
Sbjct: 209 EKLSGWPERVLTMQENWIGQSVG 231



 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 25/187 (13%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGN 360
           +SKS GN +DP EV+   G D  R F++ +    KD  +D   ++   R    +   +  
Sbjct: 625 MSKSKGNGVDPEEVLANYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLNRVWRQVYE 684

Query: 361 LVSR-----SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            V R     S+     +        G+ T+++  +       ++E+ E+++    + A+A
Sbjct: 685 FVVRGSGTESLQGKAAELLQAKVEAGSLTKAERDLRRAVHTAIKEVSEDLEEYQFNTAIA 744

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++ L +             L +   PD       V  E IR L +LL  F P +A +++
Sbjct: 745 GLMKLSNA------------LAEAEIPD-----SPVYAEGIRTLVLLLAPFAPHMAEELW 787

Query: 475 DILFVAD 481
             L   D
Sbjct: 788 QALGGTD 794


>gi|255691691|ref|ZP_05415366.1| valine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622652|gb|EEX45523.1| valine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 878

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 127/366 (34%), Gaps = 59/366 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAALTMEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KQGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             N +  +  +I    +GM  +P P     + +           E+ +      +  AL 
Sbjct: 584 FCNKIWNAFRLIKGWTNGMGSVPIPADAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALM 643

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P     V      + +    +L  +L  F+P +  
Sbjct: 644 LVYKL------FWDEFSSWLLEIVKPAYGQPVNGFIYDMVLSSFERLLEMLHPFMPFITE 697

Query: 472 KIFDIL 477
           +++  L
Sbjct: 698 ELWQQL 703



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLASQGIKKTDLSRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + DKG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFVDLFDKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|315926518|gb|EFV05900.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 196

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 3/173 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI+T I Y N  PH+GHAY  IIAD LARF+RL G +  F TGTDEHGQKI +AA+    
Sbjct: 3   YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTGTDEHGQKIEEAAKLRNS 62

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T + + D+ S  F+ + D  +I+YD + RTT+ RH +  + ++ K+  KGDIYK  Y G 
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEGH 122

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           Y +  E+++   ++           Q   +   +EE YFF+LS YQDK+L +Y
Sbjct: 123 YCISCESFFTQSQLINDCSCPDCGKQTRIL---KEESYFFKLSKYQDKILQWY 172


>gi|255067791|ref|ZP_05319646.1| valine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255048002|gb|EET43466.1| valine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 945

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|325129489|gb|EGC52318.1| leucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 876

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 747 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|307566452|ref|ZP_07628886.1| valine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307344840|gb|EFN90243.1| valine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 898

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 142/412 (34%), Gaps = 60/412 (14%)

Query: 139 DEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           + V    +   Y+ + N P++      +F ++  + D  L+          P +   +  
Sbjct: 350 ECVEDYDNKVGYSERTNVPIEPKLSTQWFLKMQHFADIALAPVMDDDIEFYPKKY-KKTY 408

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP------------------------------------ 221
                 +KD  +SR+   WG +IP                                    
Sbjct: 409 RHWLENIKDWCISRQ-LWWGHRIPAYYFKSADGKPAMVVAENDSEALSEAKKLNNAISAS 467

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWP 276
             +     +  W  +    ++    ++NP+  + + ++P    V G DI+ F    +   
Sbjct: 468 DLEQESDCLDTWFSSWLWPISVFDGINNPNNDEISYYYPTSDLVTGPDIIFFWVARMIMA 527

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +      P     F+      KG K+SKSLGN  DP+E+I++ G D +R  ++     G
Sbjct: 528 GYEYRGKFPFKHVYFTGIVRDKKGRKMSKSLGNSPDPLELIDKFGADGVRMGMMLSAPAG 587

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  +D+   ++  N        N +  +  ++       +  P +   +     +    
Sbjct: 588 NDILFDEALCEQGRN------FNNKIWNAFRLVKGWQVDNLAQPESCKIAVRWFNAKLKA 641

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR----ASTVLYVTV 452
           V  ++++  ++  I  AL  +  L      ++D    W L+   P+       +    T+
Sbjct: 642 VNADMQQQFKSYRISDALMTIYKL------FWDEFSSWYLEMIKPEYGCPIDKSTYEATL 695

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                L  +L  F+P +  +++  L+         S++  +          +
Sbjct: 696 SFFDTLLKMLHPFMPFITEELWHHLYERKAGESIMSVELNIDTPKQEDAKIE 747



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 68/247 (27%), Gaps = 25/247 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +     
Sbjct: 92  VNRLAQQGIQKADITRDEFLRYAWDWTNEHGGIILKQLRKLGCSCDWDRTAFTMDDVRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG-------QYYNAQHNPV 157
               ++  +  KG IY+G     +  + +   +D+EV    +         Y +      
Sbjct: 152 GVIKVFCDLYKKGLIYRGVRMVNWDPKAKTALSDEEVIYKEEHSKLYHLKYYISTDDQLK 211

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              +++G            +         +         I    + LK L +        
Sbjct: 212 VIRKKDGNVIHKDDKGYYAVVATTRPETIMGDSAMCINPIDEKNTWLKGLHVIVPLVGRV 271

Query: 218 IKIPDDP 224
           I + +D 
Sbjct: 272 IPVIEDE 278


>gi|90101541|sp|Q6LUW1|SYV_PHOPR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 953

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/419 (18%), Positives = 142/419 (33%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAAPAVKAVEDGQIQFVPKQYENMYFAWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNYGKVYVGRTEDEVREKNNLASVVVLRQDDDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           N D  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 492 NTDALKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEEGNAQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMMQPKLAAKIEKQTRKAFEGGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMAEGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEFSLADQWITSQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +     Y  + V+ +   L    +P +   I+  +      V  E    Q+L Q
Sbjct: 727 KGTEAQQRATRYTLITVLEKTLRLAHPILPYITESIWQSVKPLVDGVEGETIMTQALPQ 785



 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SAATQEVFVRLFEEDLIYRGKRLVNWDPKLHTAISDLEVESKDKKGFMWHFRYPL 204


>gi|86610302|ref|YP_479064.1| leucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123737942|sp|Q2JHX0|SYL_SYNJB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86558844|gb|ABD03801.1| leucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 882

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA +
Sbjct: 34  RKFYALSMFPYPSGNLHMGHVRNYTITDVIARHKRMQGYAVLHPMGWDAFGLPAENAAID 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +  QN    R+    L +SYD    I T    ++   + L+ +    G  Y+ 
Sbjct: 94  RGIPPAKWTYQNIAQMREQLQRLGLSYDWEREITTCAPDYYKWTQWLFLQFFKAGLAYQK 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V               V+    + +FF+++AY D+LL+  E 
Sbjct: 154 EAPVNWDPVDQTVLANEQVDAE---GRSWRSGALVEKRMLKQWFFKITAYADQLLADLEK 210

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +    E       G
Sbjct: 211 LSGWPERVRTMQENWIGQSVG 231



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 24/187 (12%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGN 360
           +SKS GN +DP EV+   G D  R F++ +    KD  +D   ++   R    +   +  
Sbjct: 633 MSKSKGNGVDPEEVLAHYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLNRVWRQVYE 692

Query: 361 LVSR-----SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRAL 414
            V R     S    + +        G+ T++++ +       ++E+ E+++N    + A+
Sbjct: 693 FVVRGGGTESWRGRVSELLPAKVEVGSLTKAEKDLRRAIHTAIKEVSEDLENDYQFNTAI 752

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A+++ L + +                 +       V  E IR L +L+  F P +A +++
Sbjct: 753 AELMKLSNAL----------------GEAGIPDSPVYAEGIRTLVLLMAPFAPHIAEELW 796

Query: 475 DILFVAD 481
             L  AD
Sbjct: 797 QALGGAD 803


>gi|307257571|ref|ZP_07539332.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863919|gb|EFM95841.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 948

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 130/397 (32%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEAGNVYVARNEEEVRSKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 ENGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 610 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   RE +       A   +         D Y +  KP     
Sbjct: 665 VEYSLADRWIESTFNRTVGTFREALSQYRFDLAANAIYDFTWNEFCDWYLELTKP-VFAN 723

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +        V V+ +L  L    +P +  +I+ 
Sbjct: 724 GTEAQKRGASQTLVRVLEKLLRLAHPIMPFITEEIWQ 760



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|254670772|emb|CBA07066.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 945

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDSIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|189030335|sp|A9M162|SYL_NEIM0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G     ++  + +       + ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 747 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPAVDEA 810


>gi|161869318|ref|YP_001598485.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161594871|gb|ABX72531.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 914

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 69  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 128

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 129 MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 188

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 189 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 244

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 245 DKLEHWPEQVKTMQRNWIGKSRGMTVR 271



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 671 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 724

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G     ++  + +       + ++ ++  + Q  + A+A 
Sbjct: 725 RLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAA 784

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 785 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLETAVRLLWPIVPHICETLWSE 831

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 832 LNGAKLWEAGWPAVDEA 848


>gi|161485691|ref|NP_637968.2| leucyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|48428548|sp|Q8P7J1|SYL_XANCP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 816

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 34  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 94  AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 154 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 209

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 210 LDQLDGWPDSVKTMQRNWIGRSEGL 234



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 71/512 (13%), Positives = 145/512 (28%), Gaps = 99/512 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 336 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQAWDATQWRDWYTDKS 394

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 395 RELELINSAEFDGLDYHGAFEALAERFERKGQGQRRINYRLRDWGVSRQRYWGCPIPVIY 454

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       + G  
Sbjct: 455 CAKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGP 502

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+    +    +A +W PADL+V G +    H +Y+ 
Sbjct: 503 AERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFR 560

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                      
Sbjct: 561 FYHKLMRDARLVDSDEPVTNLLTQGMVIAETFYRDADNGGKDWINPADVEIQRDERGRVV 620

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 621 GASLIADGQPVHIGGTEKMSKSKNNGVDPQAMVAKYGADTVRLFSMFAAPPEQSLEWNEA 680

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           G+    R    L   +   V    + +            + +   ++I       + ++ 
Sbjct: 681 GVDGMARFMRRLWVQVHKHVGEGAAAL---------DVASLSAEQKAIRRKTHETIGKVD 731

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L +             L K +   A     V  E +  + +L
Sbjct: 732 DDYGRRHSFNTAIAAVMELSNA------------LAKFDDASAQG-RAVRQEALEAMVLL 778

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   EN  F  +D
Sbjct: 779 LNPITPHASHALWQVLGRGETLLENVPFPQVD 810


>gi|325203294|gb|ADY98747.1| valyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 945

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    +  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETEELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|291517811|emb|CBK73032.1| Isoleucyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 532

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 96/268 (35%), Gaps = 5/268 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+         Y         + +PA       D     F+++   + LL    
Sbjct: 7   VIDCWFDSGAMPFAQHHYPFENKEVFEQQFPAKFISEAVDQTRGWFYSLMAESTLLFNKA 66

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +         G+K+SKS GN +DP + +E++G DA+R++     A      + ++
Sbjct: 67  PYENVIVLGHVQDENGQKMSKSKGNAVDPFDALEKMGADAIRWYFYTSSAPWIPKRFGEN 126

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIR 402
            + +     L           +   + ++D              D+ ILS  +  ++ + 
Sbjct: 127 AVMEGQRKFLGTLWNTYAFYILYANIDEFDPTKYELDFSKLAVMDKWILSRLNSAIKAVD 186

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           EN+ +  I  A   +   V ++ + Y    +     K                ++ +++ 
Sbjct: 187 ENLASYKIPEAARALDEFVDDMSNWYVRRCRDRFWAKGMEQDKINAYMTLYTCLKDISLA 246

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489
               +P +  +I+  +  + +    +S+
Sbjct: 247 AAPMIPFMTEEIYQNMVRSVDKTAPESI 274


>gi|218463361|ref|ZP_03503452.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 514

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 103/526 (19%), Positives = 176/526 (33%), Gaps = 70/526 (13%)

Query: 16  PNAQPHIGHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVD 74
           PN + H+GH     ++ADV  R+HR+ G      TG DEHG      A+  G        
Sbjct: 2   PNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKARKLGRPVDDVAH 61

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
            +          +DI  D F+RT+ + H D    ++ ++   G +        Y    E 
Sbjct: 62  MHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLRASGYVELRDGEQLYCGTCEE 121

Query: 135 YYNDD-------EVYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQDKLLS 178
           +  D              D                 NP+     +G   R        L 
Sbjct: 122 FAADSLAVGECPACNAPTDSNLCEDCGSALQHNLLRNPIHTTSGQGLILRPIRQVHFELE 181

Query: 179 YYESHPEF-----ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ---YIMYV 230
            +    +        P   + + + +++S L  L +SR  FD G+ +    +     +  
Sbjct: 182 KFAPGLDHAIEASGWPESIKRKELDWLRSKLMALPMSRH-FDRGVTLNSPVEVAGQTLMT 240

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLP 285
           W + L  Y T    L   +G+       +     +  +G+D   ++ I   A L S    
Sbjct: 241 WFEGLWCYETGIERLCKQNGADLDDTMRNASTRLVFFMGQDNRFYYTIGVTASLFSRGYA 300

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG--KDGFYDK 343
           +P       F   +G K S S  + +   EV  ++  + LRY+L          D  +  
Sbjct: 301 IPYNHAIQDFYKLEGAKFSTSRDHAVWADEVAADIDTNVLRYYLASIAKPFGANDNDFLI 360

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL +               R+    L+ Y G   T  A   + E      +  ++   E
Sbjct: 361 EGLLQTAARI----------RAFETALRKYAGCNETLTADKLTVEQ-----NHNVKRYSE 405

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +Q+  +  A+  + +                       RA T   V+   +     LL 
Sbjct: 406 AVQDLRVWDAMDAIDAFFDVASF---------------SRADT--SVSAAEVSVFLSLLN 448

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFD-PIF 507
              P LA + +   F+    R    LD   ++P   L K  D P+F
Sbjct: 449 PVTPMLAAR-YGAFFLGAGWR--PGLDGGTIRPSTGLRKPVDFPLF 491


>gi|325137232|gb|EGC59827.1| valyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 945

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQVEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHNLDREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|320101651|ref|YP_004177242.1| valyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319748933|gb|ADV60693.1| valyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 932

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 139/423 (32%), Gaps = 28/423 (6%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T    + + +                 SG      E Y      + G    +  ++    
Sbjct: 356 TPIEPYLSDQWFVAMSDLAQRAMDAVTSGQVRFHPERYAKSYLDWLGEKRDWCISRQ--- 412

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            W       +              +  E       + E   ++   L+DLS        G
Sbjct: 413 LWWGHRIPIWTCDQPDVTEEELRAAFGERSNLRWHQGEDGRWLICALEDLSPDALP---G 469

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
             +  DP  ++  W  +     +T G+ +  +  K K++P  +    +DI+      +  
Sbjct: 470 RTLTQDPD-VLDTWFSSALWPHSTLGWPEATEDLK-KYYPTSVLSTARDIITLWVARMVM 527

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                   +P             +G ++SKSLGN IDP++VIE  G DALR+ L      
Sbjct: 528 FGQFNLNEVPFRDVYIHPVIQDGQGRRMSKSLGNGIDPVDVIELYGADALRFTLASSATE 587

Query: 336 GKDGFYDKDGLK----KRVN--------ADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            +D     + ++    ++VN            N   N  +R   M L+ +  +     + 
Sbjct: 588 TQDLRMPVEQVQLPDGRKVNTSERFEQGRTFPNKFWN-AARFALMNLEGHQALEYDRASL 646

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
              D  ILS+ +R  + I  +++              +     D Y +  K       NP
Sbjct: 647 PVEDRWILSLLARASRTITADLEAFRFAEMAKTTRDFIWGDFCDWYLELVKGRLR---NP 703

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
           +   T   V   V+ QL  L+Q  +P +A +++  L      R +     R      +  
Sbjct: 704 ETRPTAQRVLAGVLDQLCRLIQPMMPFVAEQVWQALGNLAPERSWGGPTTRAAASVCVAP 763

Query: 502 TFD 504
             +
Sbjct: 764 WPE 766



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 23/149 (15%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-------- 67
                H+GHA    I D+L R+ R  G D L+  GTD  G       +            
Sbjct: 50  VTGALHLGHALNNTIQDILIRWRRAQGYDALWLPGTDHAGIATQAVVEKRLFQEEKKTRH 109

Query: 68  -------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
                          + +  +     + M    D S   F  T +++     R+ + ++ 
Sbjct: 110 DLGRDELVRRIWAWKEEYEARILNQLQRMGCSCDWSRTRF--TLDEQCARAVRVAFFRLF 167

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + G IY+G     +    +    DDE+  
Sbjct: 168 EAGLIYRGKRLVNWDTHLQTAVADDEITY 196


>gi|189083226|sp|A4VQZ0|SYL_PSEU5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 868

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNQVAPAKWTYENIAYMKAQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 207 DELDGWPEQVKTMQRNWIGKSRGM 230



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 111/393 (28%), Gaps = 89/393 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIIHCDSCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  +        K   D              Y +        D   A  W P D +
Sbjct: 480 -----ECTCPKCGAPAKRETDTMDTFVESSWYFARYASPNYDKGMVDPQAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLPKKVF-------SHGFILHKG------ 300
           + G +    H +Y   F            N P    +        ++   L  G      
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVSSNEPFKNLLTQGMVVAETYYRTLENGGKDWFN 594

Query: 301 -------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                          EK+SKS  N +DP  +I+  G D  R F+
Sbjct: 595 PADVEVERDAKAKVIGARLKTDGLPVEIGGTEKMSKSKNNGVDPQAMIDAYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++         G    + R   +        +P      A  + 
Sbjct: 655 MFASPPDMSLEWSDSGVE---------GASRFLRRVWRLAHAHVSAGLPGALDVAALNDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++       +++   ++ Q+   + A+AQV++L++ +      + P        DRA 
Sbjct: 706 QKAVRRAIHLAIKQASTDVGQHHKFNTAIAQVMTLMNVL-----EKAP---TAGEQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               +  E +  +A+LL    P + ++++  L 
Sbjct: 757 ----LLQEGLETVALLLAPITPHICHELWQQLG 785


>gi|57641683|ref|YP_184161.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74506312|sp|Q5JJ31|SYI_PYRKO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57160007|dbj|BAD85937.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 1065

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 12/259 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+      +  Y  N +    K WPAD  V G+D +   F++    + +    +
Sbjct: 549 VVDVWFDSGIASWASLDYPRNKE-LFEKLWPADFIVEGEDQVTKWFYSQQAASVIAFDTV 607

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P          +  KG+K+SKSLGN+I P EV+++ G D  R++++      ++  +   
Sbjct: 608 PYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDPFRFYMLWATNPWENLRFSWK 667

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIR 402
           GL++ V   L       V  +  M L +++     P      E D  ILS  + ++ E+ 
Sbjct: 668 GLEQ-VKRMLNILWNVYVLSATYMSLDNFNPTKVNPEELPFREEDRWILSRVNSLIGEVT 726

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + ++   + RA   + + V       Y     ++ W  +  +PD+ +   Y   +V   L
Sbjct: 727 DGIETFRLTRATRGIYNFVVEDLSRWYIRLIRKRMWV-EGDDPDKLAA-YYTVWKVFDVL 784

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F P +A +I+  L
Sbjct: 785 LRLMAPFTPYIAEEIYQNL 803



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 22/184 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I   
Sbjct: 37  ENGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRSMQGYNVRRQPGFDMHGLPIEVK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            + A                      K F   N +   +    L +   +D+   T +  
Sbjct: 97  VEQALKLKNKREIETKIGVDNFIKKCKEFALNNLKIMTEQFKQLGVWMDWDNPYMTIKNE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN--PVQW 159
           + ++     K+  +KG + K      +  R +    + EV      +   + +   P++W
Sbjct: 157 YIESGWFTLKRAWEKGLLEKDKRVLHWCPRCQTALAEHEVRGEYKMRKDPSIYVKFPIEW 216

Query: 160 MEEE 163
            E+E
Sbjct: 217 KEKE 220


>gi|209694117|ref|YP_002262045.1| valyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008068|emb|CAQ78209.1| valyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 953

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 78/419 (18%), Positives = 142/419 (33%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAAPAVKAVEDGQIKFVPKQYENMYFSWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNSGKVYVGRSEEEVREKNNLAPVVVLRQDDDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           N D  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 492 NTDALKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEEGNAQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMMQPQLAKKIEKATRKTFEGGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMAEGA 667

Query: 382 AF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
               + +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L 
Sbjct: 668 ELEFSLADQWITSQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP-VLW 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
           K    +     Y  + V+ +   L    +P +   I+  +      V  E    Q+L Q
Sbjct: 727 KGTEAQQRATRYTLITVLEKTLRLAHPILPYITESIWQSVKPLVDGVEGETIMTQALPQ 785



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRETFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SAATQEVFVRLFEEDLIYRGKRLVNWDPKLHTAISDLEVESKDKKGFMWHFRYPL 204


>gi|148360627|ref|YP_001251834.1| valyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|148282400|gb|ABQ56488.1| valyl tRNA synthase [Legionella pneumophila str. Corby]
          Length = 921

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 112/358 (31%), Gaps = 56/358 (15%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI----KIPD 222
           +  + +Q             +    R         +     S +   F   I     +  
Sbjct: 383 WDKTYFQWMDNIEDWCISRQLWWGHRIPAWYDNHGNIYVGYSENDVRFKHKIDQSTPLKQ 442

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           D   ++  W  +     +T G+ +       +F+P  + V G DI+ F    +       
Sbjct: 443 DED-VLDTWFSSALWPFSTLGWPERTP-ELEQFYPTSVLVTGFDIIFFWVARMIMMGLKF 500

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
           +  +P  +   +      +G K+SKS GNV+DP+++++                      
Sbjct: 501 TGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLDSLIAKRTSNLMLNSVRD 560

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G++  +D   ++     +  N + N   
Sbjct: 561 RITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEG--YRNFCNKLWNAAR 618

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +    ++          ++ +D+ ILS     + ++    +          +   V  
Sbjct: 619 YVLLNTDEEQIDFGDGAFQYSPADQWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWH 678

Query: 424 --VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  KP      +    S          + V+ Q+  LL   +P +  +I+ 
Sbjct: 679 EYCDWYLELSKP---ILQDEQALSAMKRGTRRTLIHVLDQILKLLHPLMPFITEEIWQ 733



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 69/180 (38%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
           E ++  I           H+GH ++  I D L R+HR+ G   L+  GTD  G      +
Sbjct: 29  EGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALTRYHRMLGDKTLWQPGTDHAGISTQLVV 88

Query: 59  AKAAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  G++ K    +                 ++  R +   +D S + F  T ++  
Sbjct: 89  ERQLEAQGISRKDLTREQFLDKVWQWKEESGNTITQQMRRLGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ ++G IY+G     +  +     +D EV    +  +      PV   EE
Sbjct: 147 SAAVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSEE 206


>gi|326796825|ref|YP_004314645.1| Valyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547589|gb|ADZ92809.1| Valyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 927

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 130/398 (32%), Gaps = 81/398 (20%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
            +  V+      ++  + +     +   E+     +P +  N   S+++  L+D  +SR+
Sbjct: 350 GNTVVEPYLTNQWYVAVESLAKPAIEAVENGDIQFVPKQWENTYFSWMRD-LQDWCISRQ 408

Query: 213 TFDWG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTT 242
              WG  I    D                             + ++  W  +      T 
Sbjct: 409 -LWWGHQIPAWYDAQGKFYVGKDEASVREKYNLGNDVELTQDEDVLDTWFSSALWTFATQ 467

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           G+ +  +  K     +D+ V G DI+ F    +       +  +P      +      +G
Sbjct: 468 GWPEETEEFKLFS-ESDVLVTGFDIIFFWVARMIMMTLKFTDKVPFKTVYITGLIRDERG 526

Query: 301 EKISKSLGNVIDPIEVIEE-------------------------------------VGVD 323
           +K+SKS GNVIDP+++I                                        G D
Sbjct: 527 DKMSKSKGNVIDPLDLINGIDIESLVQKRTYGMMQPRLAEKVEKNTRSAYPEGIQAYGTD 586

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGA 382
           ALR+ L    + G+D  +D + L+     +  N I N  +R V M  ++ D     +   
Sbjct: 587 ALRFTLCSLASGGRDIKFDLNRLEG--YRNFCNKIWN-ATRYVLMNTEEKDCGQSGSDVE 643

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
            + +D  I+S   +    + +         A   +   +     D Y +  KP  L   N
Sbjct: 644 LSLADRWIISRLQQAEAAVNKAYDTHRYDLAAQALYEFMWHEYCDWYLELSKP-VLWDEN 702

Query: 441 PDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              A         V V+     L    +P L  +I+  
Sbjct: 703 ATEAQLTGTRRTLVRVLEAFLRLAHPMMPFLTEEIWQR 740



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 24/168 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ------ 63
            I  PN     H+GHA++  I D + R  R+ G   L+  G+D  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHAFQHSIMDAMIRRARMQGKQTLWQPGSDHAGIATQMVVERQLAAQ 95

Query: 64  --------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         KV+  +       S   R + D +D S + F  T +    +  + +
Sbjct: 96  NTTRTELGREKFLEKVWEWKGQSGGTISDQMRVLGDSVDWSKERF--TMDPGMSEAVQEV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ D+G IY+G     +  +     +D EV    +  +      P+
Sbjct: 154 FVRLYDEGIIYRGQRLVNWDPKLHTAISDLEVISEEENGFLWHFRYPL 201


>gi|325133087|gb|EGC55759.1| valyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139065|gb|EGC61611.1| valyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 945

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGTVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|269966353|ref|ZP_06180439.1| Valyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829030|gb|EEZ83278.1| Valyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 952

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRTEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMAAN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVEGVEGETIMLQALPQFDEANF 790



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRH 102
            +                + F+D+                  L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|257386747|ref|YP_003176520.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169054|gb|ACV46813.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 930

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 75/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  +R+ R+ G DVL   G D  G     AA+    
Sbjct: 38  YVLAMFPYTSGNLHMGHVRNYTITDAYSRYRRMQGEDVLHPMGWDSFGLPAENAAEERDT 97

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + + +  +   + +     +   Y  D  + T +  ++   + L+K+  ++G + +    
Sbjct: 98  SPEEWTRKCIESMKAQMSEMGFGYDWDREVTTCDPEYYRWNQWLFKRFHEEGLVERKGSE 157

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V   A+         PV   + + +F  ++ Y D+L+   +    
Sbjct: 158 VNWCPSCETVLADEQVEGEAE--LCWRCDTPVTQRDLDQWFLTITDYADELVDDIDELAG 215

Query: 186 FILPIERRNEVISFVKSG 203
           +   +          + G
Sbjct: 216 WPESVRAMQRDWIGRQHG 233



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 113/350 (32%), Gaps = 44/350 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   EE G            L  +       L         +    
Sbjct: 448 WGISRQRYWGTPIPMVHCEECGAVPVPDEDLPVELPEFVQTTGNPLDEVDEFVQTTCPDC 507

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G      +            D              Y +        D ++A  W P D +
Sbjct: 508 GGPAERET------------DTMDTFVDSSWYFLRYTSPDREDAPFDTARANDWLPVDQY 555

Query: 262 VIGKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           V G +    H +Y            L  +    + + + G +   GEK+SKS GNV+ P 
Sbjct: 556 VGGIEHAVMHLLYARFVTKAISDLELLDHREPFQNLVTQGMVQLDGEKMSKSKGNVVSPQ 615

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            ++EE G D  R F+++     +D  +  +G++              ++R    +     
Sbjct: 616 NIVEEYGADTARLFMMQAARPERDFDWKDEGVESS---------HRFLTRLYDAVEAHVG 666

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
              P  G   +  + +     RV     E+ +      AL +   L+S +DRY +A +P 
Sbjct: 667 --SPPAGEAGDVTDYVRHEIDRVTAIADESYEQLTFTEALRETRELLSLLDRYAEATEP- 723

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                    A TV       +  +  LL    P +  +++  L  AD+ R
Sbjct: 724 --------HAETVEA----ALSTIVRLLAPVAPHVTEELWSELGRADDQR 761


>gi|330999223|ref|ZP_08322941.1| valine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329575289|gb|EGG56837.1| valine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 944

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 126/372 (33%), Gaps = 51/372 (13%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +      +   +  +  S   +                       +++    G+K+ 
Sbjct: 402 PEQWQKVYKDWLSNIQDWCLSRQLWWGHQIPAWYDDKGNVYVAHTEEEAQQKAGEGVKLH 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     +T     N   +   + P+ + V G DIL F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSTLI---NDPKAFDIYLPSSVLVTGYDILFFWVARMIMMTRF 517

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--------------------- 318
            +  +P             +G K+SKS GN +DP+++I+                     
Sbjct: 518 FTGRVPFKNVYIHGLVRDAEGNKMSKSEGNTLDPLDIIQGVDLESLVKKNTTGLRQPEKA 577

Query: 319 ----------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                           E+G DALR+ +      G++  +D          +  N + N  
Sbjct: 578 PIVERKLSKHYPEGINEIGADALRFTMAAYATLGRNVNFDVKR--ADGYRNFCNKLWN-A 634

Query: 363 SRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +R V M +  KD       P  ++  D+ I S   R +QE+R+  ++  +  A   + S 
Sbjct: 635 TRFVLMNIEGKDCGLDPNAPMEYSAPDQWIWSEFERTVQEVRKAFEDYRLDNAANAIYSF 694

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +     D Y +  K  +L + N        +  V V+ Q   L    +P +  +++  + 
Sbjct: 695 IWNQYCDWYLELSKV-QLNQGNEAVQRATRHTLVTVLEQTLRLAHPIIPFITEELWQKVS 753

Query: 479 VADENRCFQSLD 490
           V    R   S+D
Sbjct: 754 VVAGVRSENSVD 765



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   + D L RF+R++G + ++  GTD  G      
Sbjct: 38  EGKPSFSIQLPPPNITGILHMGHAFNHSVMDSLTRFYRMNGYNTMWLPGTDHAGIATQIV 97

Query: 62  AQ-------------------NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKR 101
            +                   N     K +   N  +  R + D LD  +D    T    
Sbjct: 98  VERKLEAQGKNRRDMPRDDFVNEIWKWKEYSGGNILKQMRRLGDTLD--WDRLYFTMNDD 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                   +  + +KG IY+G     +  + +   +D EV       +      P
Sbjct: 156 LAKVVVDCFVDLYEKGLIYRGRRLVNWDPKLQTSVSDLEVEPKEQDGHLWEIRYP 210


>gi|296106307|ref|YP_003618007.1| valyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648208|gb|ADG24055.1| valyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 921

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 112/358 (31%), Gaps = 56/358 (15%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI----KIPD 222
           +  + +Q             +    R         +     S +   F   I     +  
Sbjct: 383 WDKTYFQWMDNIEDWCISRQLWWGHRIPAWYDNHGNIYVGYSENDVRFKHKIDQSTPLKQ 442

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           D   ++  W  +     +T G+ +       +F+P  + V G DI+ F    +       
Sbjct: 443 DED-VLDTWFSSALWPFSTLGWPERTP-ELEQFYPTSVLVTGFDIIFFWVARMIMMGLKF 500

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
           +  +P  +   +      +G K+SKS GNV+DP+++++                      
Sbjct: 501 TGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLDSLIAKRTSNLMLNSVRD 560

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G++  +D   ++     +  N + N   
Sbjct: 561 RITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEG--YRNFCNKLWNAAR 618

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +    ++          ++ +D+ ILS     + ++    +          +   V  
Sbjct: 619 YVLLNTDEEQIDFGDGAFQYSPADQWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWH 678

Query: 424 --VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  KP      +    S          + V+ Q+  LL   +P +  +I+ 
Sbjct: 679 EYCDWYLELSKP---ILQDEQALSAMKRGTRRTLIHVLDQILKLLHPLMPFITEEIWQ 733



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 69/180 (38%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
           E ++  I           H+GH ++  I D L R+HR+ G   L+  GTD  G      +
Sbjct: 29  ESKRFCIMLPPPNVTGSLHMGHGFQHTIMDALTRYHRMLGDKTLWQPGTDHAGISTQLVV 88

Query: 59  AKAAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  G++ K    +                 ++  R +   +D S + F  T ++  
Sbjct: 89  ERQLEAQGISRKDLTREQFLDKVWQWKEESGNTITQQMRRLGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ ++G IY+G     +  +     +D EV    +  +      PV   EE
Sbjct: 147 SAAVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSEE 206


>gi|254560699|ref|YP_003067794.1| leucine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254267977|emb|CAX23845.1| leucine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 875

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 74/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N    R     + +S D    I T +  ++   + ++     KG + +
Sbjct: 106 ERKVNPREWTYANIATMRGQLQSMGLSLDWSREIATCDPDYYRHQQRMFLDFLGKGLVTR 165

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   L    +
Sbjct: 166 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLHDALD 221

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
               +   +            GL+  
Sbjct: 222 GLERWPEKVRLMQRNWIGRSEGLEVR 247



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAAR 693

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   ++        P   A    D  +     + L  + E+++    +R +A + +L
Sbjct: 694 FVQRVWRLVHGATAANGPGGTA----DAPLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +D                 R         E  R L  L+   +P LA + + +L   
Sbjct: 750 ANALD--------------EGLRGGASKAAAGEAARILVQLIAPMMPHLAEESWRVLGGE 795

Query: 481 D--ENRCFQSLDQRL 493
                  +   DQ L
Sbjct: 796 GLVAETAWPVADQAL 810


>gi|304310516|ref|YP_003810114.1| Leucyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301796249|emb|CBL44457.1| Leucyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 815

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++ F R+ G  VL   G D  G     AA
Sbjct: 31  GKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVMSHFQRMQGKSVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R     L  SYD    + T   +++   +  + K+ +KG +Y
Sbjct: 91  IKNNVAPAKWTYENIDYMRKQLKRLGFSYDWSRELATCNPKYYRWEQWFFTKLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G   +        V+  E   +F +++AY ++LL+  
Sbjct: 151 KKSSMVNWDPVDQTVLANEQVVDGKGWRSGAT----VERREIPQWFLKITAYAEELLTDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLEGWPEQVKTMQRNWIGRSEG 229



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 31/262 (11%)

Query: 232 IDALTNYLTTTGYLDN---PDGSKAKFW-PADLHVIGKDILRFHAIY-------WPAFLL 280
               + Y       D       +++ +W   D ++ G +    H +Y            L
Sbjct: 494 FMESSWYFARFSCRDQSQSMLDARSDYWLSVDQYIGGIEHAILHLLYARFFHKLMRDQGL 553

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + +     ++ + G +L  G K+SKS GN +DP  +I++ G D +R F +      +   
Sbjct: 554 TQSHEPFTRLLTQGMVLKDGAKMSKSKGNTVDPQALIDQYGADTVRLFTMFAAPPEQSLE 613

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +   G++       A+     + R V               A T +++ +       LQ+
Sbjct: 614 WSDSGVEG------ASKFLRRLWRLVHAKALAGRPAALDTSALTSNEQDLRRKTHETLQK 667

Query: 401 IRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           + ++   +   + A+A V+ L++ V R+         + T+P   + V     E +  + 
Sbjct: 668 VYDDFARRFTYNTAIAAVMELLNAVSRF---------EDTSPQSGAIVH----EALESIV 714

Query: 460 ILLQAFVPKLANKIFDILFVAD 481
           I+L    P + + ++  L  ++
Sbjct: 715 IMLAPITPHICHTLWQHLGHSE 736


>gi|157878078|pdb|1H3N|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate
          Length = 820

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 5/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+   H+GH     + DVLARF R+ G +VL   G D  G     AA
Sbjct: 31  GRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N R  ++   ++ I   +D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    +G+ +  +  PV+  E E ++ R++AY ++LL   
Sbjct: 151 RAKGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDL 207

Query: 181 ESHPEFILPIERRNEVISFVK 201
           E           +   I   +
Sbjct: 208 EGLNWPEKVKAMQRAWIGRSE 228



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 29/202 (14%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L K   +SKS GN +     ++E G D  R  ++       +  + ++G++         
Sbjct: 632 LWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQ--------- 682

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIH 411
           G    ++R    + +D + ++ T G F        D  +       L+++ E+++    +
Sbjct: 683 GAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFN 742

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A ++  ++ +  Y         +K  P     V  V    IR    +L  F P LA 
Sbjct: 743 TAIAALMEFLNALYEY---------RKDRP-----VTPVYRTAIRYYLQMLFPFAPHLAE 788

Query: 472 KIFDILFVAD-ENRCFQSLDQR 492
           +++   +        +  LD++
Sbjct: 789 ELWHWFWPDSLFEAGWPELDEK 810


>gi|15834908|ref|NP_296667.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285078|ref|ZP_06194472.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289102|ref|ZP_06195404.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|13878793|sp|Q9PL20|SYI_CHLMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7190330|gb|AAF39156.1| isoleucyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 1036

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/463 (15%), Positives = 136/463 (29%), Gaps = 32/463 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---VFVDQNSRNFRDMADVLDISYDD 93
           F      +V      D  G   ++     G   K     + +  +N   +     I +  
Sbjct: 330 FFACQEHNVPLVCPVDNQGCFTSEVTDFVGEYIKFADKGIARRLKNENKLFYQGTIRHRY 389

Query: 94  FI--RTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     +      +    K         +  +     ++   +    E  +    
Sbjct: 390 PFCWRTDSPLIYKAVNSWFVSVEKVKHKMLKANESIHWTPGHIKHGRFGKWLEGARDWAI 449

Query: 148 QYYNAQHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                   P+  W  E+G    + + Q+  L          L     +E++         
Sbjct: 450 SRNRYWGTPIPIWRSEDGELLVIRSIQE--LEELSGQKIVDLHRHFIDEIVIHKNGKSFH 507

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                              Y+   W D+         Y           +PAD    G D
Sbjct: 508 RIP----------------YVFDCWFDSGAMPYAQNHYPFERAEETEARFPADFIAEGLD 551

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+ +   A  L         + +   +   G K+SK L N   P ++++  G DA
Sbjct: 552 QTRGWFYTLTVIAAALFDQPAFKNVIVNGIVLAEDGNKMSKRLNNYPSPKKIMDTYGADA 611

Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           LR +L+  +    +D  +   G++  +   L      L        L  +     T    
Sbjct: 612 LRLYLLNSVVVKAEDLRFSDKGVEAVLKQVLLPLSNALAFYKTYAELYGFSPNETTDLEL 671

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPD 442
            E D  ILS    ++ + RENM    +H A++  I  +    + Y    +    +  +  
Sbjct: 672 AEIDRWILSSLYSLVGKTRENMAQYDLHAAVSPFIDFIEDLTNWYIRRSRRRFWESEDSP 731

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                     EV+   + ++  F+P  A  ++  L V  +   
Sbjct: 732 DRRAAFATLYEVLMVFSKIIAPFIPFTAEDMYQQLRVETDPES 774



 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 83/287 (28%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    +         
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYATMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 71  VFVDQNSRNFRDMADVLDISY--------DDFIR---------TTEKRHHDTCRILWKKI 113
                   NF +    +   Y        D   R         T +    ++   ++  +
Sbjct: 105 AIDRFGIANFNEECRKIVFRYVDEWKYFVDRIGRWVDFSATWKTMDLSFMESVWWVFHSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             +G +Y+G     +S +     ++ E  +        +        +++G     +   
Sbjct: 165 YKQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVAKFALQDDQGILLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL+R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPGLTYVRIQDKESGEEYILGQESLAR----------WFPDRESYKWIG 274

Query: 234 ALTN-------YLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+        Y     Y  +     A +  PAD     +     H 
Sbjct: 275 QLSGESLVGRRYCPLFPYFQDQQDRGAFRVIPADFIEESEGTGVVHM 321


>gi|329956968|ref|ZP_08297536.1| valine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523725|gb|EGF50817.1| valine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 894

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 122/365 (33%), Gaps = 58/365 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDDLKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 427 GHRIPAYFLPEGGYVVAATPEEALKLAWEKTGNSALKIEDLRQDEDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               + NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 487 LFDGILNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++IE  G D +R  ++     G D  +D    ++  N      
Sbjct: 547 KLGRKMSKSLGNSPDPLDLIERYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             N +  +  +I   +    +  P A   +     S  + V  E+ +      +  AL  
Sbjct: 601 FNNKIWNAFRLIKGWEVSSEVAVPEAAELAMRWFDSKQNAVAAEVADLFGKYRLSEALMA 660

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P         V   T+     L  LL  F+P +  +
Sbjct: 661 VYKL------FWDEFSSWYLEMIKPAYGQPINKKVYDTTIGFFDNLLHLLHPFMPFITEE 714

Query: 473 IFDIL 477
           ++  +
Sbjct: 715 LWQHI 719



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|312879847|ref|ZP_07739647.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783138|gb|EFQ23536.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 829

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y      YP+   H+GH     I D+LARF R+ G +VL+  G D  G     AA  
Sbjct: 31  PKFYCLEMFPYPSGALHMGHLRNYSIGDLLARFLRMQGYNVLYPIGFDAFGLPAENAALK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  +N  +  +    +  SYD    + T    ++   + L+ +   KG  Y+ 
Sbjct: 91  YGVQPSEWTWKNIDHMTEQLHRMGCSYDWRRRVETCNPDYYRWTQWLFLQFFKKGLAYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +    +    +++V    DG +       V+    E +F R + Y  +LL   + 
Sbjct: 151 HAPVNWCDSCQTVLANEQV---IDGGHCWRCGTAVKKRGLEQWFLRTTDYAQELLDCLDE 207

Query: 183 HPEFILPIERRNEVISFVKSG 203
            P +   ++   +       G
Sbjct: 208 LPGWPERVKIMQKNWIGRSEG 228



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 96/276 (34%), Gaps = 39/276 (14%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D              Y +     +      A +W P D ++ G +    H IY   F   
Sbjct: 495 DTMDTFICSSWYFLRYTSPWTDAEPFAHDDAAYWMPVDQYIGGIEHACLHLIYARFFTKV 554

Query: 282 AN---------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
            +               + + G +L +G K+SKS GNV+DP E+I   G D  R F++  
Sbjct: 555 CSDLGLLPQTVREPFTNLLTQGMVLKEGTKMSKSKGNVVDPDEIIRRYGADTARLFILFA 614

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE------S 386
               KD  +   G++         G    + R   ++    +G+                
Sbjct: 615 SPPEKDLDWSDKGVE---------GAHRFLGRVHRLVEDRLEGLRAAGAPLASSDLPRRE 665

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           D  +  +    +  +  ++   +  + A+A+++ L + +  +    KP            
Sbjct: 666 DRDLKRLIHGTIDRVTRDIRDERQFNTAVARLMELSNALGAF----KP---------ADG 712

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           T   V  E +  L + L  F P L  +++ +L   D
Sbjct: 713 TAWRVLREGVETLLVCLSPFTPHLCEELWQMLGHQD 748


>gi|308388392|gb|ADO30712.1| valyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325131064|gb|EGC53788.1| valyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325202991|gb|ADY98445.1| valyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207211|gb|ADZ02663.1| valyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 945

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQVEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHNLDREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|260590994|ref|ZP_05856452.1| valine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536859|gb|EEX19476.1| valine--tRNA ligase [Prevotella veroralis F0319]
          Length = 908

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 135/388 (34%), Gaps = 59/388 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L+          P + +N         +KD  +SR+   
Sbjct: 379 PIEPKLSTQWFLKMQHFADIALAPVMDDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 436

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     M  W  +   
Sbjct: 437 WGHRIPAYYFKDAEGKNAIVVAETADEALKLAKEKNPNVTAADLEQESDCMDTWFSSWLW 496

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    ++NPD  +   ++P    V G DI+ F    +    +      P     F+  
Sbjct: 497 PISVFDGINNPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKFPFKHVYFTGI 556

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 557 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 613

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++       I  P A   + E   +    V +E+ E  ++  I  AL
Sbjct: 614 ---FNNKIWNAFRLVQGWQTADIEQPQASRIAVEWFDAKLKAVNKEMDEQFKSYRISEAL 670

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P+    +  VT +        L  +L  F+P + 
Sbjct: 671 MTVYRL------FWDEFSSWYLEMIKPEYGKPIDKVTYDATLRFFNSLLKMLHPFMPFIT 724

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFM 498
            +++  ++   ++      + +L     
Sbjct: 725 EELWQHIYDRKDSESIMCDELKLPAPTK 752



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 43  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 102

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T +     
Sbjct: 103 VNKLAQEGIKKTDLTREQFLEHAWDWTHEHGGIILKQLRRLGCSCDWDRTAFTMDDTRSK 162

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 163 SVIKVFCDLYNKGYIYRGVRMVNWDPQAQTALSDEEVIYKDEH 205


>gi|149728716|ref|XP_001500886.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Equus caballus]
          Length = 903

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIKGMQAHWIGDC 276



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 106/326 (32%), Gaps = 63/326 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        +   D              Y            + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAAQRETDTMDTFVDSAWYYFRYTDPQNAHSPFSAALADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQYVQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  +     K     EK+SKS  N +DP EV+E+ G+D +R +L+      KD  +D  
Sbjct: 622 SVPVYAETKEKLEVTWEKMSKSKHNGVDPEEVVEQYGLDTIRLYLLFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L S +   I     G +P P   ++ +++         + V+ +
Sbjct: 680 -VKTDALPGVLRWQQRLWSLATRFIEARASGKVPRPQLLSDEEKAEARKLWEYKNSVISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +   + L++ A++ ++ L S +     A +   L     + A          +  L 
Sbjct: 739 VTAHFTDDFLLNSAISHLMGLSSAL---LQASQRVVLHSPEFEDA----------LCALM 785

Query: 460 ILLQAFVPKLANKIFDILFVADENRC 485
           ++     P + ++++  L +     C
Sbjct: 786 VMAAPMAPHITSELWAGLALVPRKLC 811


>gi|30350185|gb|AAP31493.1| putative valyl-tRNA synthetase [Western X phytoplasma]
          Length = 860

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 130/338 (38%), Gaps = 31/338 (9%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI- 220
           E     +       +        +     +R  +  +     L+D  +SR+   WG  + 
Sbjct: 351 EPRLSLQWFLKTKAISQSVLQEHQINFFPKRFLKTFNNWLENLEDWCISRQ-LWWGHPLP 409

Query: 221 -------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                                DP  ++  W  +    L T G+ +N      + +P D  
Sbjct: 410 VWYKGDEINVQSQDPGDGFQRDPD-VLDTWFSSALWPLCTLGWPNNNVELFQRRFPVDTL 468

Query: 262 VIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           V G DIL F        +  L   +P    +        +G K+SKS GN +DPI++I++
Sbjct: 469 VTGYDILTFWVSKMALQSMNLIEKIPFKDVLLHGLIRDSQGHKMSKSKGNGVDPIDIIDK 528

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+FL    + G D  Y++  +    N    N I N +SR + + + + D     
Sbjct: 529 YGTDALRWFLTTNSSPGADLLYNETKIASSWN--FINKIWN-ISRFIKLNI-NTDQTNFQ 584

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
                  ++ +LS  SR+++           +   + + + V E   + + +  K   LK
Sbjct: 585 AETLLLPEKFLLSQLSRLMEATNHLYDKYEFNIVGSLLYNFVWEDLANWHLEFLK-IVLK 643

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + + + +       + +++    LL  F+P + + I++
Sbjct: 644 EYDREVSLNSQKFALYILKITLQLLHPFIPFVTDAIYE 681



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I         + H+GHA+   + D++ R  ++ G DVLF  G D  G       
Sbjct: 31  DKTPFTIVIPPPNITGKLHLGHAWNNTLQDIIIRRKKMLGFDVLFLPGMDHAGIATQSKI 90

Query: 63  QN--------AGVTTKVFVDQNSRNFRDMADVL----------DISYDDFIRTTEKRHHD 104
           +             TK    + +  ++D                + YD    T +K    
Sbjct: 91  KQKLKEEGFAEQNLTKELFLKYAALWKDEYTKNIHTQWERLSLHLDYDYEKFTLDKDFSQ 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++ ++ DK  IY+      +    ++  ++ EV  
Sbjct: 151 VVEKVFIQLYDKKLIYRDYKIINWDPFTQSTISELEVNY 189


>gi|301336474|ref|ZP_07224676.1| isoleucyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 1036

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 71/463 (15%), Positives = 136/463 (29%), Gaps = 32/463 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK---VFVDQNSRNFRDMADVLDISYDD 93
           F      +V      D  G   ++     G   K     + +  +N   +     I +  
Sbjct: 330 FFACQEHNVPLVCPVDNQGCFTSEVTDFVGEYIKFADKGIARRLKNENKLFYQGTIRHRY 389

Query: 94  FI--RTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     +      +    K         +  +     ++   +    E  +    
Sbjct: 390 PFCWRTDSPLIYKAVNSWFVSVEKVKHKMLKANESIHWTPGHIKHGRFGKWLEGARDWAI 449

Query: 148 QYYNAQHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                   P+  W  E+G    + + Q+  L          L     +E++         
Sbjct: 450 SRNRYWGTPIPIWRSEDGELLVIRSIQE--LEELSGQKIVDLHRHFIDEIVIHKNGKSFH 507

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                              Y+   W D+         Y           +PAD    G D
Sbjct: 508 RIP----------------YVFDCWFDSGAMPYAQNHYPFERAEETEARFPADFIAEGLD 551

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+ +   A  L         + +   +   G K+SK L N   P ++++  G DA
Sbjct: 552 QTRGWFYTLTVIAAALFDQPAFKNVIVNGIVLAEDGNKMSKRLNNYPSPKKIMDTYGADA 611

Query: 325 LRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           LR +L+  +    +D  +   G++  +   L      L        L  +     T    
Sbjct: 612 LRLYLLNSVVVKAEDLRFSDKGVEAVLKQVLLPLSNALAFYKTYAELYGFSPNETTDLEL 671

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPD 442
            E D  ILS    ++ + RENM    +H A++  I  +    + Y    +    +  +  
Sbjct: 672 AEIDRWILSSLYSLVGKTRENMAQYDLHAAVSPFIDFIEDLTNWYIRRSRRRFWESEDSP 731

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                     EV+   + ++  F+P  A  ++  L V  +   
Sbjct: 732 DRRAAFATLYEVLMVFSKIIAPFIPFTAEDMYQQLRVETDPES 774



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 83/287 (28%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    +         
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYATMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 71  VFVDQNSRNFRDMADVLDISY--------DDFIR---------TTEKRHHDTCRILWKKI 113
                   NF +    +   Y        D   R         T +    ++   ++  +
Sbjct: 105 AIDRFGIANFNEECRKIVFRYVDEWKYFVDRIGRWVDFSATWKTMDLSFMESVWWVFHSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             +G +Y+G     +S +     ++ E  +        +        +++G     +   
Sbjct: 165 YKQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVAKFALQDDQGILLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL+R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPGLTYVRIQDKESGEEYILGQESLAR----------WFPDRESYKWIG 274

Query: 234 ALTN-------YLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+        Y     Y  +     A +  PAD     +     H 
Sbjct: 275 QLSGESLVGRRYCPLFPYFQDQQDRGAFRVIPADFIEESEGTGVVHM 321


>gi|294668215|ref|ZP_06733322.1| valine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309923|gb|EFE51166.1| valine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 945

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  +K     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLAEKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|184200963|ref|YP_001855170.1| leucyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581193|dbj|BAG29664.1| leucyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 836

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 7/197 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y+     YP+   H+GHA    + DV+AR+      DV+   G D  G     AA  
Sbjct: 41  ERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYWWHRSYDVMHPVGWDSFGLPAENAAIK 100

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +  +N    R+      IS  +D  I T++  ++   + L+ +    G  Y+ 
Sbjct: 101 RDAHPAEWTYRNIDTQRESFKRYAISADWDREIHTSDPEYYRWTQWLFLQFYSHGLAYRK 160

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V  GA        H PV       ++F+++ Y  +LL    +
Sbjct: 161 DSPVNWCPKDQTVLANEQVVNGA----CERCHTPVTKKSLNQWYFKITDYAQRLLDD-MT 215

Query: 183 HPEFILPIERRNEVISF 199
             E   P        ++
Sbjct: 216 ELEGHWPERVLAMQRNW 232



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 110/299 (36%), Gaps = 38/299 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVI 263
            ++      G     D    M  ++D+   YL  T   D+          ++ P D +V 
Sbjct: 498 WVNVTCPACGGPAQRDTD-TMDTFVDSSWYYLRYTSPHDDAAPFDRAAVDRWLPVDQYVG 556

Query: 264 GKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y   F        L       K + + G +L+ G+ +SKSLGN +D  E 
Sbjct: 557 GVEHAILHLLYSRFFTKALYDFGLVGFTEPFKALLNQGQVLNGGKAMSKSLGNGVDLGEQ 616

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++  GVDA+R  +V       D   D   +          G    ++R+  +     D  
Sbjct: 617 LDAFGVDAVRLTMVFASPPEDDV--DWADVS-------PQGSQKFLARAWRLA---QDCT 664

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                +F + D+++ S   R + +  + + +   +  +A+ + LV+ V +  D       
Sbjct: 665 ADPAASFADGDKALRSATHRTVADAEQLLDSGKFNVVIARTMELVNTVRKAIDT------ 718

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
                           E +  +AILL    P  A  ++ ++   D      + ++D  L
Sbjct: 719 ------GCGPADPAVREAVEAVAILLSLVAPYTAEDMWHLIGHEDTVVRAPWPTVDPAL 771


>gi|52425611|ref|YP_088748.1| valyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81825506|sp|Q65S97|SYV_MANSM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52307663|gb|AAU38163.1| ValS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 954

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 75/422 (17%), Positives = 143/422 (33%), Gaps = 93/422 (22%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAETAIKAVEEGEIQFVPKQYENLYYSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEQGNVYVGRSEEEVRSKNGLNSSVALRQDEDVLDTWFSSALWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
                  A F P ++ + G DI+ F         +           +P      +     
Sbjct: 497 QQTK-ELAMFHPTNVLITGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNVIDP+++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVIDPLDMIDGIDLESLLAKRTGNMMQPQLAEKIAKATKKEFPEGIQPH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLSALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSTGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D+ I +  ++ +Q  R  +       A  ++         D Y +  KP     
Sbjct: 671 RELSLADKWIQAEFNKTVQNFRNALDQYRFDLAATELYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVADE---NRCFQSLDQ 491
               +     +  V V+ +L  L    +P +  +I+  +     V  E    + F + D+
Sbjct: 730 GTDAQIRAASFTLVNVLEKLLRLAHPLIPFITEEIWQKVKDFAGVEGETIMTQPFPAFDE 789

Query: 492 RL 493
            L
Sbjct: 790 AL 791



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I+          H+GHA++  + D L R+HR+ G + L+  GTD  G       
Sbjct: 37  GRPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLIRYHRMQGDNTLWQAGTDHAGIATQMVV 96

Query: 63  Q---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
           +                     K++  +       S+  R + + +D   + F  T ++ 
Sbjct: 97  ERKIAAEENKTRHDYGREAFIEKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 155 LSEAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|330993124|ref|ZP_08317062.1| Leucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759894|gb|EGG76400.1| Leucyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 877

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 7/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 43  DRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRARGFSVLHPMGWDAFGLPAENAA 102

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  GV    +   N    R     L  S+  D  I T    ++   + L+  +   G + 
Sbjct: 103 RERGVHPGQWTMDNIAAMRTTLKRLGFSFNWDREIATCLPEYYGRQQKLFLDMLRGGLVE 162

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            ++  +   +F +++ +  +LL   
Sbjct: 163 RRESWVNWDPVDNTVLANEQVVDG----RGWRSGALIEQKKLSQWFLKITKFAPQLLDGL 218

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            + P +   +    E       G   +         G     D   +     D L  
Sbjct: 219 STLPRWPERVRTMQERWIGRSEG-AKVRFGLHEPPAGFDTDLDSVEVFTTRPDTLFG 274



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 118/378 (31%), Gaps = 55/378 (14%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR- 193
             N      G   Q Y     PV    + G            L    +      P+E   
Sbjct: 434 VVNWRLRDWGISRQRYWGCPIPVIHCTDCGAQPVPDDQLPVKLPEDVTFDRPGNPLEHHP 493

Query: 194 -NEVISFVKSGLKDLSLSRKTFD-----WGIKIPDDPQYIMYVWIDALTNYLTTTGY--- 244
             + ++  K G   L  +          W       P         A   +L    Y   
Sbjct: 494 TWKHVACPKCGKAALRETDTCDTFVDSSWYFARFTAPHADQPTLPAAADGWLPVDQYIGG 553

Query: 245 --LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS-------ANLPLPKKVFS- 292
                     A+F+   +H  G   +   F  ++    +          N   P++V   
Sbjct: 554 IEHAILHLLYARFFTRAMHETGHLHVDEPFDGLFTQGMVNHESYRDAQGNWLYPEEVERR 613

Query: 293 --HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                    G+        K+SKS  N + P+ +IE  G D  R+F++ +    +D  + 
Sbjct: 614 GDSAVRRDNGQAVTIGRVEKMSKSKRNTVAPVAIIERFGADTARWFVLSDSPPERDMEWT 673

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G+        A      V R V  + +        P   + S +++     R +  + 
Sbjct: 674 ESGVAA------AARFLQRVFRIVRTVAEQVPAGTACPATLSRSADALRRATHRTIAAVT 727

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS---TVLYVTVEVIRQLA 459
           E +++   + A+A++  L S +               + ++A+    + +   E    ++
Sbjct: 728 EALESFSANVAVARLHELTSAL--------------ADAEKAAGEDGMDFARREAATIIS 773

Query: 460 ILLQAFVPKLANKIFDIL 477
           +L+   VP  A  +  +L
Sbjct: 774 LLVAPMVPHQAEAMMALL 791


>gi|190572724|ref|YP_001970569.1| valyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|254783559|sp|B2FMS2|SYV_STRMK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|190010646|emb|CAQ44255.1| putative valyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 942

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 126/396 (31%), Gaps = 82/396 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++     + L   E      +P    N       + ++D  +SR+   W
Sbjct: 372 IEPYLTDQWFVKMDDLAKRGLELVEDGSISFVPPNWINT-YRHWMNNIQDWCISRQ-LWW 429

Query: 217 G--IKIPDDP-----------------------------QYIMYVWIDALTNYLTTTGYL 245
           G  I    D                                ++  W  +     +T G+ 
Sbjct: 430 GHRIPAWFDEATGSCYVGRSEEEVRAKHNLGSDVVLNQESDVLETWFSSQLWPFSTLGWP 489

Query: 246 DNPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           +    +     ++ P+ + + G DI+ F    +      L   +P     F+      +G
Sbjct: 490 NEQAMAERGFDRYLPSSVLITGFDIIFFWVARMIMATDNLVGKIPFKDVYFTGLIRDGQG 549

Query: 301 EKISKSLGNVIDPI-------------------------------------EVIEEVGVD 323
           +K+SKS GNV+DP+                                     + I   G D
Sbjct: 550 QKMSKSKGNVLDPLDIIDGITIDDLVAKRTGGLMQPKMVEKIEKATRKEFPDGIAAHGAD 609

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ +      G+D  +D +  +   N    N + N  SR   M  +        P   
Sbjct: 610 ALRFTIAALATHGRDIKFDMNRAEGYKN--FCNKLWN-ASRFALMNTEGAAFTG-VPRPR 665

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T+++  IL+  +    E + +            +         D + +  KP  L   + 
Sbjct: 666 TDAERWILARLAATTAEAQGHFAAYRFDLLAQCLYEFAWNAFCDWFLELSKP-ALNGADA 724

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             A +  +  + V+  L  LL    P +  +++  L
Sbjct: 725 ADAESTRHTLLYVLEALLRLLHPLTPFITEQLWQQL 760



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 24/139 (17%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A------------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRH 102
                                    +  Q      R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDSLGREGFIGKVWEWKQQSGDTIERQMRRLGTSADWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYK 121
                  + +  ++G IY+
Sbjct: 152 SAAVNEAFVRWYEQGLIYR 170


>gi|213612875|ref|ZP_03370701.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 838

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|218247996|ref|YP_002373367.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226695252|sp|B7JYA9|SYL_CYAP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218168474|gb|ACK67211.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 856

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     A
Sbjct: 30  SNKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G+    +  +N    +     L   I ++  + T    ++   + L+ ++   G  
Sbjct: 90  AIDRGIPPAEWTYKNMSQMKQQLQTLGLSIDWEREVATCAPEYYKWTQWLFLQLYQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ++G  + +    V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV--DSEGYSWRSGAK-VERKLLRQWFLKITDYAEQLLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++   E       G
Sbjct: 207 LDKLPGWPDRVKLMQENWIGKSVG 230



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 23/182 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D   ++ +          N
Sbjct: 616 EKMSKSKYNGVDPKQVLGKYGADTARMFILFKAPPEKDLEWDDADVEGQFR------FLN 669

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
            V R V+  L++    +      T+ D+ +       ++EI E+++ +   + A+++++ 
Sbjct: 670 RVWRLVANYLENKPKTVKKASELTKEDKDLRRAIHTAIKEISEDLEGDYQFNTAVSELMK 729

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + +              T+     +   V  E I  L ILL  F P +A +++  L  
Sbjct: 730 LSNAL--------------TDAKCLES--GVYQEGIETLLILLAPFAPHIAEELWHNLGY 773

Query: 480 AD 481
             
Sbjct: 774 EK 775


>gi|261378077|ref|ZP_05982650.1| valine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145525|gb|EEZ71943.1| valine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 945

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDNEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYAATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|146308801|ref|YP_001189266.1| leucyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145577002|gb|ABP86534.1| leucyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 906

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 67  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAA 126

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 127 MKNQVAPAKWTYENIAYMKSQLKSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIY 186

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LLS  
Sbjct: 187 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLSSL 242

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 243 DELDGWPEQVKTMQRNWIGKSFG 265



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 78/185 (42%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I+  G D  R F++          +   G++         G   
Sbjct: 664 EKMSKSKNNGVDPQDMIDAYGADTCRLFMMFASPPDMSCEWSDAGVE---------GANR 714

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      + ++  +++       +++   ++ Q+   + A+AQ
Sbjct: 715 FLRRVWRLAHGHVSAGLPGKLDVASLSDEQKAVRRAIHLAIKQASNDIGQHHKFNTAIAQ 774

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +++            T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 775 VMTLMNVLEK--------AATATEQDRA-----LVQEGLEIVTLLLAPITPHISHELWQR 821

Query: 477 LFVAD 481
           L  AD
Sbjct: 822 LGHAD 826


>gi|304388975|ref|ZP_07371022.1| valine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337109|gb|EFM03296.1| valine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 945

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|257060679|ref|YP_003138567.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590845|gb|ACV01732.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 856

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     A
Sbjct: 30  SNKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G+    +  +N    +     L   I ++  + T    ++   + L+ ++   G  
Sbjct: 90  AIDRGIPPAEWTYKNMSQMKQQLQTLGLSIDWEREVATCAPEYYKWTQWLFLQLYQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ++G  + +    V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV--DSEGYSWRSGAK-VERKLLRQWFLKITDYAEQLLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   E       G
Sbjct: 207 LDKLSGWPDRVKLMQENWIGKSVG 230



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 23/182 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D   ++ +          N
Sbjct: 616 EKMSKSKYNGVDPKQVLGKYGADTARMFILFKAPPEKDLEWDDADVEGQFR------FLN 669

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
            V R V+  L++    +      T+ ++ +       ++EI E+++ +   + A+++++ 
Sbjct: 670 RVWRLVANYLENKPKTVKKASELTKEEKDLRRAIHTAIKEISEDLEGDYQFNTAVSELMK 729

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + +              T+     +   V  E I  L ILL  F P +A +++  L  
Sbjct: 730 LSNAL--------------TDAKCLES--GVYQEGIETLLILLAPFAPHIAEELWHNLGY 773

Query: 480 AD 481
             
Sbjct: 774 EK 775


>gi|303257377|ref|ZP_07343391.1| valine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860868|gb|EFL83945.1| valine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 944

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 126/372 (33%), Gaps = 51/372 (13%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            E +      +   +  +  S   +                       +++    G+K+ 
Sbjct: 402 PEQWQKVYKDWLSNIQDWCLSRQLWWGHQIPAWYDDKGNVYVAHTEEEAQQKAGEGVKLH 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     +T     N   +   + P+ + V G DIL F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSTLI---NDPKAFDIYLPSSVLVTGYDILFFWVARMIMMTRF 517

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--------------------- 318
            +  +P             +G K+SKS GN +DP+++I+                     
Sbjct: 518 FTGRVPFKNVYIHGLVRDAEGNKMSKSEGNTLDPLDIIQGVDLESLVKKNTTGLRQPEKA 577

Query: 319 ----------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                           E+G DALR+ +      G++  +D          +  N + N  
Sbjct: 578 PIVERKLRKHYPEGINEIGADALRFTMAAYATLGRNVNFDVKR--ADGYRNFCNKLWN-A 634

Query: 363 SRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +R V M +  KD       P  ++  D+ I S   R +QE+R+  ++  +  A   + S 
Sbjct: 635 TRFVLMNIEGKDCGLDPNAPMEYSAPDQWIWSEFERTVQEVRKAFEDYRLDNAANAIYSF 694

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +     D Y +  K  +L + N        +  V V+ Q   L    +P +  +++  + 
Sbjct: 695 IWNQYCDWYLELSKV-QLNQGNEAVQRATRHTLVTVLEQTLRLAHPIIPFITEELWQKVS 753

Query: 479 VADENRCFQSLD 490
           V    R   S+D
Sbjct: 754 VVAGVRSENSVD 765



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   + D L RF+R++G + ++  GTD  G      
Sbjct: 38  EGKPSFSIQLPPPNITGILHMGHAFNHSVMDSLTRFYRMNGYNTMWLPGTDHAGIATQIV 97

Query: 62  AQ-------------------NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKR 101
            +                   N     K +   N  +  R + D LD  +D    T    
Sbjct: 98  VERKLEAQGKNRRDMPRDDFVNEIWKWKEYSGGNILKQMRRLGDTLD--WDRLYFTMNDD 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                   +  + +KG IY+G     +  + +   +D EV       +      P
Sbjct: 156 LAKVVVDCFVDLYEKGLIYRGRRLVNWDPKLQTSVSDLEVEPKEQDGHLWEIRYP 210


>gi|261391710|emb|CAX49159.1| valyl-tRNA synthetase (valine--tRNA ligase; ValRS) [Neisseria
           meningitidis 8013]
          Length = 945

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDNEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|94676934|ref|YP_588734.1| valyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220084|gb|ABF14243.1| valyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 957

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 116/358 (32%), Gaps = 54/358 (15%)

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           S   +           +   I    +  + V  G  +  +          +    Q ++ 
Sbjct: 418 SWMNNIQDWCISRQLWWGHRIPAWYDSKNQVYVGRSEAEVRHTYQLSDTVMLFQDQDVLD 477

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN------ 283
            W  +     +T G+    +  +    P  + V G DI+ F         +  N      
Sbjct: 478 TWFSSGIWTFSTLGWPSQTEALRIFH-PTSVVVSGFDIIFFWIARMVMLTMHFNKDATGQ 536

Query: 284 --LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------ 317
             +P      +      +G+K+SK+ GNVIDP+++I                        
Sbjct: 537 PQVPFKTVYITGLIRDEEGQKMSKTKGNVIDPLDIIDGISLNNLLAKRSSNIRHPHLAKK 596

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                           G DALR+ L  + + G+D  +    L+     +  N + N  SR
Sbjct: 597 ICNNTVQQFPNGIPSYGTDALRFTLTAQASTGRDINFSMKRLEG--YRNFCNKLWN-ASR 653

Query: 365 SVSMILKDYDGMIPTPG---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            + +  +D D      G     + +D  IL++ ++ +++ R+ + N         +    
Sbjct: 654 FILIHTQDQDCGFGFDGGKKVLSLADRWILALLNQTVKKFRDAIDNYRFDLVAGILYEFT 713

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D Y +  KP      N        Y  V V+  L  L    +P +  KI+  +
Sbjct: 714 WYQFCDWYLELTKPTIYNNHNIAELRGTRYTLVYVLESLLRLAHPIIPFITEKIWQSI 771



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 25/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D+L R+HR+ G + L+  GTD  G       ++   
Sbjct: 39  CIMIPPPNVTGGLHMGHAFQHTIMDILIRYHRMLGKNTLWQVGTDHAGIAAQMIVEHQIF 98

Query: 68  TT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
                       K F+++  +             R +   +D   + F  T ++   D  
Sbjct: 99  AEEGKTRQDYGRKAFIEKIWQWKALSGNLISNQIRRLGCSVDWERERF--TLDEGLSDAV 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ ++  +  IY+G     +  + +   +D EV              P+
Sbjct: 157 KEVFVRLYQENLIYRGKRLVNWDPKLQTAISDLEVENRESTSSMWYLRYPL 207


>gi|325145371|gb|EGC67648.1| valyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325205267|gb|ADZ00720.1| valyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 945

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGTVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|296134000|ref|YP_003641247.1| leucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032578|gb|ADG83346.1| leucyl-tRNA synthetase [Thermincola potens JR]
          Length = 822

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y      YP+   H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 30  RSKPKYYALEMFPYPSGNLHMGHVRNYSIGDVVARFKTMQGYNVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  N R+    L  SYD    + T    ++   + L+     +G  
Sbjct: 90  AIKHGVPPARWTLSNIENMRNQLKRLGFSYDWEREVTTCLPDYYKWTQWLFLLFYKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +         +++V  GA           V   E   +FF+++ Y D+LL  
Sbjct: 150 YKKKSAVNWCPDCMTVLANEQVVNGA----CERCGAQVGKKELAQWFFKITDYADRLLKD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   E       G
Sbjct: 206 IELLKGWPDKVKIMQENWIGRSEG 229



 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 108/286 (37%), Gaps = 32/286 (11%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           L+ +  T     K   D              Y +        + +   +W P + ++ G 
Sbjct: 478 LNTTCPTCGGPAKRETDTMDTFICSSWYFLRYCSPHAAEVAFERAAVDYWMPVEQYIGGV 537

Query: 266 DILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +    H +Y   F        L         + + G +L  G K+SKS GNV+ P E++ 
Sbjct: 538 EHAILHLLYSRFFAKVLYDAGLVGFEEPFTNLLTQGMVLKDGAKMSKSKGNVVSPEEIVA 597

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D  R F++      +D  +   G++         G    ++R   ++     G+  
Sbjct: 598 KYGADTARLFILFAAPPERDLEWSDQGVE---------GAFRFLNRVWRLVYNYVSGLDD 648

Query: 379 TP--GAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           T      + +D  +  +    ++ + +++ Q    + A++ ++ +V+ + +Y        
Sbjct: 649 TAHVEEMSPADREMRRITHVTIKRVTDDISQRFNFNTAISAIMEMVNALYQY-------- 700

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  N  R S V     E +  L +LL  F P +A +++  L   D
Sbjct: 701 -RDKNEKRNSAVE---AEAMNSLVLLLAPFAPHIAEELWHELGFTD 742


>gi|146328845|ref|YP_001209270.1| valyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146232315|gb|ABQ13293.1| valyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 932

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 128/400 (32%), Gaps = 87/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSY-----YESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           ++    + +F  LS    + L+        S     +P    N         L+D  +SR
Sbjct: 356 IEPYLTDQWFVDLSKKGYERLTKPAIEAVRSGRIRFVPSNWENT-YFHWMENLQDWCISR 414

Query: 212 KTFDWG--IKIPDD----------------------------PQYIMYVWIDALTNYLTT 241
           +   WG  I    D                             + ++  W  +      T
Sbjct: 415 Q-LWWGHRIPAWYDADGHIYVAENEAAAREKYQLADDVPLTQDEDVLDTWFSSGLWPFAT 473

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSHGFILH 298
            G+ ++       ++P+ + V G DI+ F     +    + +   +P             
Sbjct: 474 QGWPESTPDLNT-YYPSSILVTGFDIIFFWVARMVLLGLYAMDGKVPFHTVYIHGLVRDS 532

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDPI+VI+ +                                     G
Sbjct: 533 EGKKMSKSKGNVIDPIDVIDGIDLETLVAKRTENMMQPQLAEKIAAQTRKEFPEGIPACG 592

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+        G+D  +D   ++     +  N + N  +R V M  +  +       
Sbjct: 593 TDALRFTFAALATSGRDVVFDLQRVEG--YRNFCNKLWN-AARFVLMQTEGKEIAATVES 649

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
               +   I       +  +R+         A   +   V     D Y +  KP  L K 
Sbjct: 650 KDAVA-RWIDDRLCVTIAAVRQAFAEYRFDFAATAIYEFVWHDYCDWYLELVKP-VLNKN 707

Query: 440 NPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           NPD A+        + ++  +  L    +P ++ +I+  L
Sbjct: 708 NPDEAAKAQTRRHLLTILETILRLAHPIMPFISEEIWQTL 747



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 24/157 (15%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---------- 59
            I  PN     H+GHA++  I D+L R+HR++  + L+  G D  G              
Sbjct: 40  MIPPPNVTGSLHMGHAFQDTIMDILIRYHRMNAHNTLWQVGCDHAGIATQMVVERRLNAQ 99

Query: 60  ---------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                    +A        K     Q  +  R +   +D S + F  T ++        +
Sbjct: 100 GKTRHDLGREAFLQEVWQWKKTSGGQIMKQLRRLGTAVDWSRERF--TMDEGMSRAVCAM 157

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++++ D G IY+G     +    +   +D EV    +
Sbjct: 158 FERLYDDGLIYRGKRLVNWDPVLKTAISDLEVENRDE 194


>gi|187478980|ref|YP_787004.1| leucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123766015|sp|Q2KXE5|SYL_BORA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115423566|emb|CAJ50102.1| leucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 885

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 6/210 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   +  ++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPAYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G           PV+  E  GY+ R++ Y D+LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGAPVEKREIPGYYLRITDYADELLDQ 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSL 209
            ++         R  +     KS    L+ 
Sbjct: 212 VKNGLPGWPERVRVMQENWIGKSEGVRLAF 241



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 100/343 (29%), Gaps = 72/343 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS S        +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCSCPACGKPARRETDTMDTFVDSSWYFMRYTSPGNDQAMVDKRNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAF--------LLSANLPLPK-----KVFSHGFIL---------------- 297
               H +Y   +        +L  + P  +      V +H +                  
Sbjct: 552 HAVLHLLYARFWTKVMRDLGMLKFDEPFTRLLCQGMVLNHIYSRRTPQGGIEYFWPEEVE 611

Query: 298 ---------------HKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                            G +        +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NIYDAKGAIVGARLKSDGSEITYGGVGTMSKSKNNGVDPQSLIDTLGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +   +   G+           +  L     + + +          A     + +    
Sbjct: 672 PEQTLEWSDSGVDGANR--FLRRLWALAYDRRAAVARGLASGYAWQDAPAPV-KDLRREL 728

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +L++   + Q    +  ++  + +++ +D   +AQ P       P   + +     E 
Sbjct: 729 YGLLKQAEYDYQRIQYNTVVSASMKMLNAID---NAQLP-----EGPAADAAI----AEG 776

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE-----NRCFQSLDQR 492
           +  L  +L   VP +   I+  L  A E     +  +  +D+ 
Sbjct: 777 LGLLLRVLYPVVPHVTWHIWRDLGYAAELGDLLDAPWPHVDEA 819


>gi|59711018|ref|YP_203794.1| valyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81311020|sp|Q5E7U0|SYV_VIBF1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|59479119|gb|AAW84906.1| valyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 957

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 138/402 (34%), Gaps = 90/402 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +   +  +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAEPAVKAVEDGQIQFVPKQYENMYFAWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNDGKVYVGRTEEEVREKNNLAPVVVLRQDDDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           N D  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 492 NTDALKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEEGNAQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAKKIEKNTRKTFENGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--- 378
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMSLSA 667

Query: 379 ---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                  F+ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP
Sbjct: 668 EERANMEFSLADKWIESQFELAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L K    +     Y+ + V+ +   L    +P +   I+ 
Sbjct: 728 -VLWKGTEAQQQATRYMLITVLEKTLRLAHPVLPYITESIWQ 768



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKNESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SAATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGFMWHFRYPL 204


>gi|332169813|gb|AEE19068.1| isoleucyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 1135

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 96/270 (35%), Gaps = 7/270 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           ++ VW D+ +       Y           W  AD    G D     F+ ++  A ++  +
Sbjct: 605 LIDVWFDSGSMPYAQWHYPFENKELVEDTWRKADFIAEGVDQTRGWFYTLHAIATMIFDD 664

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +     V +   +   G+K+SK LGN  DP E +E+ G DA R++++       +  +D 
Sbjct: 665 VAYKNVVSNGLVLDKNGQKMSKRLGNATDPFETLEKYGPDATRWYMISNANPWDNLKFDL 724

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEI 401
           +G+++                ++   L ++             E D  ILS    ++ E+
Sbjct: 725 EGIEEVKRKFFGTLYNTYNFFALYANLDNFAFAEAEIELSQRPEIDRWILSELHSLIAEV 784

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            +        +A   + + V E   + +    +    K        +        +  +A
Sbjct: 785 DKFYAEYEPTKATRAIDTFVQENLSNWFVRLSRRRFWKGEYATDKISAYQTLYTCLETVA 844

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSL 489
            L     P    K++  L  A     F+S+
Sbjct: 845 KLSAPVAPFFMEKLYKDLNAATGKEDFESI 874



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P + H     I D+  R+  + G  V    G D HG  +    + 
Sbjct: 41  KPYVFFEGPPSANGLPGVHHVLARAIKDIFPRYKTMKGFQVKRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK  +                  + +  + D+ + +   +  +D   T + ++ +T
Sbjct: 101 ELGITKEDIGTKITVEEYNEACKKAVMRYTDIWNDLTEKMGYWVDMEDPYITYKAKYMET 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              L K+I +K  +YKG     YS +     +  E+ +   
Sbjct: 161 VWWLLKQIYNKDLLYKGYTIQPYSPKAGTGLSSHELNQPGC 201


>gi|260772179|ref|ZP_05881096.1| valyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260613046|gb|EEX38248.1| valyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 952

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 80/418 (19%), Positives = 141/418 (33%), Gaps = 90/418 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQYENMYFSWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +      T G+ D
Sbjct: 432 GHRIPAWYDNDGNVYVGRDEQEVRTKHNLAPVVVLKQDNDVLDTWFSSALWTFGTQGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  K    P+D+ V G DI+ F         +           +P      +      
Sbjct: 492 NTDALKTFH-PSDVLVTGFDIIFFWVARMIMMTMHFCKDEHGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNMMQPQLAAKIEKNTRKTFENGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEAQDCGFTAGE 667

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP  L K
Sbjct: 668 IEYSLADKWIESQFELAAKEFNNHINNFRLDMAANTLYEFIWNQFCDWYLELTKP-ILWK 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQSLDQ 491
            +  +        + V+ +   L    +P +   I+  +      V  E    Q+L Q
Sbjct: 727 GSEAQQRGTRRTLITVLEKTLRLAHPVIPYITETIWQSIKPLVDGVEGETIMLQALPQ 784



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKPAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRNFRDMAD---------VLDISYDDFIRTTEKRH 102
            +                + F+D+      +               + +D    T ++  
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKAESGGTITQQLRRLGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLHEDDLIYRGKRLVNWDPKLHTAISDLEVENKDIKGHMWHFRYPL 204


>gi|21113792|gb|AAM41892.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
          Length = 837

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 55  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 114

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 115 AIKNKTAPAKWTYANIEHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 174

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 175 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPQWFLRITDYAQELLDG 230

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++           GL
Sbjct: 231 LDQLDGWPDSVKTMQRNWIGRSEGL 255



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 71/512 (13%), Positives = 145/512 (28%), Gaps = 99/512 (19%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD-ISYDDFIRTTE 99
            G           H Q+  + A   G+   V V +      D     D   + D+     
Sbjct: 357 MGYGTGAVMAVPGHDQRDFEFANKYGL-PIVQVVKLREPRNDDEQAWDATQWRDWYTDKS 415

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +   G             + +   N      G   Q Y     PV +
Sbjct: 416 RELELINSAEFDGLDYHGAFEALAERFERKGQGQRRINYRLRDWGVSRQRYWGCPIPVIY 475

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + G           +L           PI+                       + G  
Sbjct: 476 CAKCGAVPVPEDQLPVVLPENVEFAGTGSPIKTDPT------------WRQTTCPECGGP 523

Query: 220 IPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
              +            + Y    T+    +    +A +W PADL+V G +    H +Y+ 
Sbjct: 524 AERETDTFDT--FMESSWYVARYTSPNARDMVDRRANYWMPADLYVGGIEHAILHLMYFR 581

Query: 277 --------AFLLSANLPLPKKV------------------------------------FS 292
                   A L+ ++ P+   +                                      
Sbjct: 582 FYHKLMRDARLVDSDEPVTNLLTQGMVIAETFYRDADNGGKDWINPADVEIQRDERGRVV 641

Query: 293 HGFILHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              ++  G+        K+SKS  N +DP  ++ + G D +R F +      +   +++ 
Sbjct: 642 GASLIADGQPVHIGGTEKMSKSKNNGVDPQAMVAKYGADTVRLFSMFAAPPEQSLEWNEA 701

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           G+    R    L   +   V    + +            + +   ++I       + ++ 
Sbjct: 702 GVDGMARFMRRLWVQVHKHVGEGAAAL---------DVASLSAEQKAIRRKTHETIGKVD 752

Query: 403 ENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++   +   + A+A V+ L +             L K +   A     V  E +  + +L
Sbjct: 753 DDYGRRHSFNTAIAAVMELSNA------------LAKFDDASAQG-RAVRQEALEAMVLL 799

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLD 490
           L    P  ++ ++ +L   +   EN  F  +D
Sbjct: 800 LNPITPHASHALWQVLGRGETLLENVPFPQVD 831


>gi|189083236|sp|A4XYW8|SYL_PSEMY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNQVAPAKWTYENIAYMKSQLKSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LLS  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DELDGWPEQVKTMQRNWIGKSFG 229



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 78/185 (42%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I+  G D  R F++          +   G++         G   
Sbjct: 628 EKMSKSKNNGVDPQDMIDAYGADTCRLFMMFASPPDMSCEWSDAGVE---------GANR 678

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      + ++  +++       +++   ++ Q+   + A+AQ
Sbjct: 679 FLRRVWRLAHGHVSAGLPGKLDVASLSDEQKAVRRAIHLAIKQASNDIGQHHKFNTAIAQ 738

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +++            T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 739 VMTLMNVLEK--------AATATEQDRA-----LVQEGLEIVTLLLAPITPHISHELWQR 785

Query: 477 LFVAD 481
           L  AD
Sbjct: 786 LGHAD 790


>gi|197099534|ref|NP_001127239.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Pongo
           abelii]
 gi|75070896|sp|Q5RDP4|SYLM_PONAB RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|55726702|emb|CAH90113.1| hypothetical protein [Pongo abelii]
          Length = 903

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIKGMQAHWIGDC 276



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 107/329 (32%), Gaps = 69/329 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          + + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 622 SVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   +  +++         + V+ +
Sbjct: 680 -VKTDALPGVLRWQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE---VIR 456
           +  +  ++  ++ A++Q++ L   + +                 + +V+  + E    + 
Sbjct: 739 VTTHFTEDFSLNSAISQLMGLSGALSQ----------------ASQSVILHSPEFEDALC 782

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++I+  L +     C
Sbjct: 783 ALMVMAAPMAPHVTSEIWAGLALVPRKLC 811


>gi|284161131|ref|YP_003399754.1| valyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011128|gb|ADB57081.1| valyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 864

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 138/397 (34%), Gaps = 29/397 (7%)

Query: 97  TTEKRHHDTCRILWK--KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           TT +        L K  ++  + +I +     W          +D+ +   + +      
Sbjct: 302 TTREAREKILEDLAKEGRLLKQEEIEQNVGVCWRCKTPVEIIAEDQWFVKVEKEKIIENA 361

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL----- 209
             ++W+ E      +         +  S               +  +  + +        
Sbjct: 362 KRIRWVPEHMLQRLIDWVDSMEWDWVISRQRIFATPIPVWYCKNCGEIIVAEEEWLPVDP 421

Query: 210 -----SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                 +     G    +    ++  W+D+    L   G+         K +P  L   G
Sbjct: 422 TKDMPKKPCPKCGSNEFEGETDVLDTWMDSSITPLVICGWP------DLKEYPTHLRPQG 475

Query: 265 KDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DI+R  A Y    +  L   +P  + V +   +   G K+SKSLGNVI P E+IE+ G 
Sbjct: 476 HDIIRTWAFYTILRSLALVDEIPWLEIVINGMVLGEDGRKMSKSLGNVISPEEIIEKYGA 535

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DALR +       G+D  +    +K     +        + R V+M LK  +     P  
Sbjct: 536 DALRQW-AATGVIGEDVAFSWKEVKSAYRFE---QKFWSIIRFVTMHLK--EKPPYKPEL 589

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
             ++D  ILS   ++++E+ E+M      +AL  + S       D Y +  K   L    
Sbjct: 590 LRDADRWILSKLMKLVREVDESMNAYRFDKALKAIRSFTWYEFADNYLEIVK-NRLYSGT 648

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +      +   +V   L  LL    P LA + +  L
Sbjct: 649 EEEKIPARFTLYKVASTLIKLLAPITPFLAEECWHRL 685



 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I T   YP    H+G+A      D +AR+ R+ G +V+F  G D HG      
Sbjct: 29  SKKPHYIIDTPPPYPTGSFHLGNALNWCYIDFIARYRRMKGYEVMFPQGWDCHGLPTEVK 88

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     +K              F  +N    R+    L  S D      T    ++   
Sbjct: 89  VEEIHGISKNDVPREEFRRLCMEFTMKNIEKMRETMRRLGFSIDWSKEYITMYPEYYTKT 148

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ + K+  KG IYK  +   +  R +      E+  
Sbjct: 149 QLSFVKMYKKGLIYKDYHPVVFCPRCQTTIALAEIEY 185


>gi|186477336|ref|YP_001858806.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691294|sp|B2JGX6|SYL_BURP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|184193795|gb|ACC71760.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 864

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  DKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   + T    ++   + ++ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWIFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKVMQQNWI 223



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 95/311 (30%), Gaps = 46/311 (14%)

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D GI    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWAKVCRDLGIVKFGEPAKNLLTQGMVL----NETYY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +N  G K  + PAD+ V   D  R       A                  +L   EK+S
Sbjct: 580 RENDAGKKTWYNPADVTVTHDDKGRPVGATLNADG-------------QPVVLGGVEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +    +     +          ++++++      VL++   + Q    +  ++  + +
Sbjct: 678 VWAFGQANETALTERAPFDAAKLADTEKTLRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L   
Sbjct: 738 LNAI----------------EGAKGASAAVLRETYGVLLRVLYPVVPHVTFQLWRELGYE 781

Query: 481 DENRCFQSLDQ 491
            E         
Sbjct: 782 GEFGSLLDAPW 792


>gi|88608827|ref|YP_506390.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600996|gb|ABD46464.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 851

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + HIGH    +I DVLAR+ R  G +VL   G D  G    KAA
Sbjct: 45  QRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N+ +  +++ ++N    R     + +SYD    + T   ++++  +  +      G  Y
Sbjct: 105 INSNIHPRIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAGLAY 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   +F ++S + ++LL   
Sbjct: 165 RKNSEVNWDPIDKTVLANEQVIDG----RGWRSGAVVVKRKIPQWFLKISDFSEELLKGL 220

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ES   +   ++           G
Sbjct: 221 ESLTGWPEKVKTMQTNWIGKSEG 243



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 112/372 (30%), Gaps = 82/372 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV + E+          Q   +          LP E    V      
Sbjct: 444 WGISRQRYWGCPIPVVYCEKCS-------MQPVKVEDL----PVTLPEEVEFTVQGNPLE 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  +      G     D       + ++   +               K + P D++
Sbjct: 493 HHPTWKYTNC-PKCGGPAVRDTD-TFDTFFESSWYFAAFCSKEGGIVKESCKRFLPVDMY 550

Query: 262 VIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI----------------- 296
           + G +    H +Y   F  + N         P    +                       
Sbjct: 551 IGGIEHAILHLLYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNSSGEYLYPEEA 610

Query: 297 ---LHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              L KGEK        +SKS  NV+D  E++ + G DA R+F++ +        +   G
Sbjct: 611 KSLLEKGEKVLVGKIEKMSKSKKNVVDLEEIVSKYGADAARFFILSDNPPENSFGWSDRG 670

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +           I NLV R +S                 ++ +++    ++++ ++ + M
Sbjct: 671 INASF--KFLQRIKNLVERYLS----------SKNSGEVQTGQNVKIQINKIICDMTKYM 718

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               ++ A+A++  LV+                      S    ++ E I  L  +L+ F
Sbjct: 719 DEIKLNCAVAKIHELVNL--------------------LSASGALSKETIHVLLRILEPF 758

Query: 466 VPKLANKIFDIL 477
            P LA  +   L
Sbjct: 759 APHLAEYLASKL 770


>gi|242240498|ref|YP_002988679.1| methionine--tRNA ligase [Dickeya dadantii Ech703]
 gi|242132555|gb|ACS86857.1| Methionine--tRNA ligase [Dickeya dadantii Ech703]
          Length = 749

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 87/537 (16%), Positives = 179/537 (33%), Gaps = 48/537 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R   ++ +    PN   H+GH     + ADV  R+ R+ G      TG+D++   +   A
Sbjct: 119 RRPQFVFSTPPTPNGDLHLGHLSGPYLGADVYVRYQRMIGNPAWHMTGSDDYQSYVVALA 178

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIYK 121
           +    T        SR       ++DI  D +  T +   +    +  + +   +  +  
Sbjct: 179 ERENTTPAAVAQHFSREILQTLKMMDIEPDHYTVTNDAAGYIQGAQRFFSRTLGEDKVVF 238

Query: 122 GCYSGWYSLRDEAYYNDDEVY-------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY-- 172
              +     ++  Y  + +V         G +G        P    +      + S    
Sbjct: 239 AESAALRDAQNGQYLYEVDVSGQCPGCGGGTNGNICEECGEPNVVTDMAQPLSKRSQLPP 298

Query: 173 -QDKLLSYYESHPEFILPIERRNE--VISFVKSGLKDLSLSRKTF--------DWGIKIP 221
            + ++  Y      F   I   ++   +      L     SR  F        +WGI   
Sbjct: 299 ERTQVARYLLPLHRFEQQIAEHHKVGRVPARMRELAHRVFSRPEFTVPVSHPSEWGIAPA 358

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD--------LHVIGKDILRFHAI 273
           +       +W+    +Y      ++       + W AD        +H  G D   +H+I
Sbjct: 359 ETEGEGQVIWVWPEMSYGFLYD-IEQLGKKINRPWSADEPGKDWKIVHFFGYDNSFYHSI 417

Query: 274 YWPAFLLSANLPLPKKVFSHG--FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +PA    A       +  H   F L  G+K S S  + +   E++    VDA+R++L  
Sbjct: 418 LYPALYHLAYPEWQPDIDYHYNEFYLLDGKKFSTSRRHAVWGKEILTPESVDAVRFYLCL 477

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   +     +  V   L       +    + +   + G  P  G +T+   +  
Sbjct: 478 TRPEQERTNFRLSQWEDEVRDTLLGEWQTWLHDLGNRVGTIFQGNAPDAGIWTKEQVAFW 537

Query: 392 SVCSRVLQEIRENM--QNQLIHRALAQVISLVSEVDRY------FDAQKPWELKKTNPDR 443
           +  + +LQ I + +      +  A   + +LV+E   +            W       D 
Sbjct: 538 ARLNGILQAITDALNPDGFSLRSAARHLKTLVTETRAFSRSQQQLAGIARWR------DE 591

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
             T + + +     L+ + +  +P+ +  +   L   +  + +    Q + PG  + 
Sbjct: 592 YRTAVALELAAANLLSAVGRPLMPRFSASLAAALG-NETAQSWLQQAQLVTPGNRIT 647


>gi|225076903|ref|ZP_03720102.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
 gi|224951789|gb|EEG32998.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
          Length = 876

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF RL+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 81/197 (41%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +       + ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++  TV     EV+     LL   VP +   ++  
Sbjct: 747 VMELLNQYDK----------TDTGSEQGRTV---AQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPAVDEA 810


>gi|154483504|ref|ZP_02025952.1| hypothetical protein EUBVEN_01208 [Eubacterium ventriosum ATCC
           27560]
 gi|149735756|gb|EDM51642.1| hypothetical protein EUBVEN_01208 [Eubacterium ventriosum ATCC
           27560]
          Length = 1052

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/464 (14%), Positives = 145/464 (31%), Gaps = 28/464 (6%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQN----AGVTTKVFVDQNSRNFRDMADVLDISYDDFI- 95
              D+ F    ++ G+                 KV VD        + D     +D    
Sbjct: 343 RNYDLPFVQLVNDKGELTEDTPYAGLFVKDADPKVLVD--LDKRGQLFDAPKFEHDYPHC 400

Query: 96  -RTTEKRHHDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            R      +      + K+++  D              S+ +  + N  E  +       
Sbjct: 401 WRCDTPLIYYARESWFIKMTEVKDKLVANNNTVNWIPKSIGEGRFGNWLENVQDWGISRN 460

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                P+   E      + S      L+    +P+        N  +   +  + +++  
Sbjct: 461 RYWGTPLNIWECCDCGCQESIGSRAELAERSGNPD--------NAKVELHRPYIDEVTFK 512

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K     +K   +   ++  W D+         Y         K +PAD      D    
Sbjct: 513 CKECGGTMKRVPE---VIDCWFDSGAMPFAQHHYPFENKDLFEKQFPADFISEAVDQTRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + LL    P    +         G+K+SKS GN +DP E + + G DA+R++
Sbjct: 570 WFYSLMAESTLLFDKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFEALGQYGADAIRWY 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
                A      +    +++     +           +   +  +D           +  
Sbjct: 630 FYTNSAPWLPNRFHGKAVQEGQRKFMGTLWNTYAFYVLYAEIDQFDPTKYTLDYDKLSVM 689

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++ + EN+ N  I  A   +   V ++ + Y    +     K  P    
Sbjct: 690 DKWLLSKLNSMVKAVDENLGNYRIPEAARALDDFVDDMSNWYVRRSRERFWAKDMPQDKI 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  + +  ++      +P +   I+  +  + +    +S+
Sbjct: 750 NAYMTLYKALVTVSKAAAPMIPFMTEDIYQNIVRSVDETAPESI 793



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE             N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      ++   T +   
Sbjct: 96  VEKLLGLNGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSGTVGFWADMENPYVTYDDNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K I DK  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKTIWDKKLLYKGFKIVPYCPRCGTPLSSQEVAQGYK 199


>gi|149194837|ref|ZP_01871931.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134996|gb|EDM23478.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 819

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 6/197 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA  
Sbjct: 32  PKKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKKGFNVLHPIGWDSFGMPAENAAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV  K +  +N    R   + L +S+       T++  +    +    K+ + G + + 
Sbjct: 92  HGVHPKKWTYENIDYMRKELNRLGLSFSKKREFATSDPEYTRWEQEFIIKMYENGLLERR 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V  G          N V+  E  G++ +++ Y ++LL   + 
Sbjct: 152 TQKVNWCETCHTVLANEQVIDG----CCWRCDNEVEIKELPGWYIKITKYAEELLRDIDK 207

Query: 183 HPEFILPIERRNEVISF 199
             +   P +      ++
Sbjct: 208 KLKGNWPDKVLTMQKNW 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 35/279 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------ 278
           +I   W                       ++ P D ++ G +    H +Y   F      
Sbjct: 503 FIQSSWYQFRFTTDFRKYRNVPFRKEDVDYFAPVDQYIGGIEHAILHLLYARFFTKALRD 562

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              ++ + P  K + + G +L  G K+SKS GNV+DP E++E+ G D  R F++      
Sbjct: 563 LGYVNLDEPFAK-LLTQGMVLKDGAKMSKSKGNVVDPDEIVEKYGADTARLFILFAAPPE 621

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           ++  +    ++       A    N + ++ S   K            T+ ++        
Sbjct: 622 QELEWSDSAVEG------AYRFLNRLYQNASKCYKTTTLPKIDTSKLTKEEKEARRKVYE 675

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           VL+  ++  +     +  +A  +  ++ +++  D +                  +  E  
Sbjct: 676 VLKRSKDTYEKTFAFNTLIAASMEALNSLNK-IDNK-----------------DLYTEGY 717

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             L  +L+  +P +A++I + LF  +  +     +  LK
Sbjct: 718 YILMNVLEPIIPHIASEISEELFNRENFKEIPIDENALK 756


>gi|258543599|ref|YP_003189032.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634677|dbj|BAI00653.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637733|dbj|BAI03702.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640787|dbj|BAI06749.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643842|dbj|BAI09797.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646897|dbj|BAI12845.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649950|dbj|BAI15891.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652940|dbj|BAI18874.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655994|dbj|BAI21921.1| leucyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 872

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 7/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 39  NKPKYYVLEMFPYPSGQLHMGHVRNYALGDVIARYKRARGFSVLHPMGWDAFGLPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  GV  K +   N    R     L  S  +D  I T    ++   + L+      G + 
Sbjct: 99  RERGVHPKEWTLNNIATMRGTLQRLGFSLNWDREIATCLPDYYGKQQKLFLDFLKGGLVE 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G           P++  +   +F +++ + + LL+  
Sbjct: 159 RRESWVNWDPIDQTVLANEQVVDGKG----WRSGAPIEKKQLSQWFLKITDFAEDLLNGL 214

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++   +   +    E       G   L  S      G+    +   +     D L  
Sbjct: 215 KTLDRWPERVRTMQERWIGRSEG-AKLRFSLHQPPAGLDENLNAVEVFTTRPDTLFG 270



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 128/370 (34%), Gaps = 53/370 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+  ++  +    +         + + P+   P  R  +          D S     F 
Sbjct: 468 PVELPDDVSFDKPGNPLDHHPTWKHTACPKCGKPATRETDTFDTF----VDSSWYFARFT 523

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK-DILRFHAIY 274
               +    +     W+    +               A+F+   +H  G  D+    A  
Sbjct: 524 APHALTPTVRAAADGWL--PVDQYIGGIEHAILHLLYARFFTRAMHRTGHLDVDEPFAGL 581

Query: 275 WPAFLLS--------ANLPLPKKV-----------FSHGFILHKGEKISKSLGNVIDPIE 315
           +   ++S         N   P++V            +    + + EK+SKS  N + P+ 
Sbjct: 582 FTQGMVSHESYKDSAGNWLYPEEVERTANGCVKRGTTEPVTVGRVEKMSKSKRNTVAPVA 641

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE  G D  R+F++ +    +D  + + G+        A      + R++  + +D   
Sbjct: 642 IIERFGADTARWFVLSDSPPERDMEWTEAGVAG------AARFSQRLFRTIRTVAQDVPA 695

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
               P       +++     R +  + E ++   I+ A+A++  L S +           
Sbjct: 696 TTECPTDIDRQADTLRRTTHRTIAAVTEALEGFAINVAVARIHELTSAL----------- 744

Query: 436 LKKTNPDRASTVLYVTV---EVIRQLAILLQAFVPKLANKIFDIL----FVADENRCFQS 488
                 ++++TV  +     E  + L +L    +P LA ++F ++     +A +    ++
Sbjct: 745 ---AEAEKSATVPGMAFARREAAQTLCLLCAPMMPHLAEEMFALVLPSAGLAAQQAWPEA 801

Query: 489 LDQRLKPGFM 498
             + L    +
Sbjct: 802 NPELLTATHI 811


>gi|307609513|emb|CBW99011.1| valyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 921

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 112/358 (31%), Gaps = 56/358 (15%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI----KIPD 222
           +  + +Q             +    R         +     S +   F   I     +  
Sbjct: 383 WDKTYFQWMDNIEDWCISRQLWWGHRIPAWYDNHGNIYVGYSENDVRFKHKIDQSTPLKQ 442

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           D   ++  W  +     +T G+ +       +F+P  + V G DI+ F    +       
Sbjct: 443 DED-VLDTWFSSALWPFSTLGWPERTP-ELEQFYPTSVLVTGFDIIFFWVARMIMMGLKF 500

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
           +  +P  +   +      +G K+SKS GNV+DP+++++                      
Sbjct: 501 TGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLDSLIAKRTSNLMLNSVRD 560

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G++  +D   ++     +  N + N   
Sbjct: 561 RITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEG--YRNFCNKLWNAAR 618

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +    ++          ++ +D+ ILS     + ++    +          +   V  
Sbjct: 619 YVLLNTDEEQIDFGDGAFQYSPADQWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWH 678

Query: 424 --VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  KP      +    S          + V+ Q+  LL   +P +  +I+ 
Sbjct: 679 EYCDWYLELSKP---ILQDDQALSAMKRGTRRTLIHVLDQILKLLHPLMPFITEEIWQ 733



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 69/180 (38%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
           E ++  I           H+GH ++  I D L R+HR+ G   L+  GTD  G      +
Sbjct: 29  EGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALTRYHRMLGDKTLWQPGTDHAGISTQLVV 88

Query: 59  AKAAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  G++ K    +                 ++  R +   +D S + F  T ++  
Sbjct: 89  ERQLEAQGISRKDLTREQFLDKVWQWKEESGNTITQQMRRLGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ ++G IY+G     +  +     +D EV    +  +      PV   EE
Sbjct: 147 SAAVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSEE 206


>gi|254229294|ref|ZP_04922712.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393199|ref|YP_003285053.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151938218|gb|EDN57058.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336793|gb|ACY50588.1| valyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 952

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRTEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFGEGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMAAN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVDGVEGETIMLQTLPQFDEANF 790



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV              P+
Sbjct: 150 SNAVQEVFIRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGNMWHFRYPL 204


>gi|156740344|ref|YP_001430473.1| isoleucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231672|gb|ABU56455.1| isoleucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 1079

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 124/379 (32%), Gaps = 23/379 (6%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
               +  Y    +++D    N+  ++   +        N ++      +      Y    
Sbjct: 409 YYAKRSWYIRTTAMKDRLVANNLLIHWVPEHIRDGRFGNWLE--NNIDWAVSRERYWGTP 466

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY--------IM 228
           +  + +   +   I    E+   V   LKDL L R   D       DPQ+        + 
Sbjct: 467 IPIWMAEDGYAECIGSLAELEQKVGRTLKDLELHRPYVDE--ITWVDPQHGLMRRIPDVA 524

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+    +    Y             AD      D     F+ ++  + LL      
Sbjct: 525 DCWFDSGAMPIAQWHYPMENTEIYELAKQADYICEAVDQTRGWFYTLHAISTLLFDRPAF 584

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +  +G+K+SKS GNV+DP  V+ E G DALR++L      G    +   GL
Sbjct: 585 KNVICLGHILDAEGQKMSKSRGNVVDPWTVMNEHGADALRWYLFTAAPPGSPRRFS-AGL 643

Query: 347 KKRVNADLANGIGNLVSRSVSMIL-------KDYDGMIPTPGAFTESDESILSVCSRVLQ 399
                      + N  +   +          KD       P      D   L+  + +++
Sbjct: 644 VAESLRKFLLTLWNTYAFFATYANLDGWTPTKDGVDQHLDPATLVPIDRWALARLNSLVR 703

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQL 458
            + +  +   +  A   +   V E+  ++  +      K+  DR            +  +
Sbjct: 704 TVTDAFEAYDVTTAARAIEDFVDELSNWYVRRNRRRFWKSEHDRDKQAAYATLYTCLLTV 763

Query: 459 AILLQAFVPKLANKIFDIL 477
           A L   FVP +A  I+  L
Sbjct: 764 AKLAAPFVPFVAEAIYRNL 782



 Score = 54.4 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 25/164 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAKAAQ 63
           +           N +P I HA   I  DV+ R+  + G  ++    G D HG  +    +
Sbjct: 38  KPFVFYEGPPTANGRPGIHHAISRIFKDVICRYRAMQGYKIIGRREGWDTHGLPVEIEVE 97

Query: 64  NA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                                    +   ++    +  R +A    +S D +I T E  +
Sbjct: 98  KKLGFSGKPDIEKYGVAEFNAQCRQSVWEYIQDWRQFTRRIAYW--VSEDAYI-TYENDY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +++++ D+G +++      +  R     +D EV  G  
Sbjct: 155 IESLWWIFRQLWDRGLLFRDYKVSMHCPRCGTSLSDHEVSLGFK 198


>gi|58040911|ref|YP_192875.1| valyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81818999|sp|Q5FN28|SYV_GLUOX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58003325|gb|AAW62219.1| Valyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 888

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/464 (13%), Positives = 145/464 (31%), Gaps = 28/464 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTT---KVFVDQNSRNFRDMADVLDISYDDFIRT----TEK 100
            T   +          +    T   +           ++ DV  ++   F+ T    + +
Sbjct: 271 ITPAHDFNDFEVGKRHDLPAPTVLDETACLWIEEIRPELRDVEGLASVAFVETLNGLSRE 330

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                     +++     I        ++ R  A        +        +    V+ +
Sbjct: 331 EGRKQVVAELERLEWLEKIEPHKLQVPHAERGGAIVEPRLTLQWYCDAKTLSGPA-VEAV 389

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW---- 216
           E     F    +++   ++      + +  +           G        +        
Sbjct: 390 ESGKIAFEPRQWENTFHAWMRDIQPWCISRQLWWGHRIPAWYGADGKVYVAENEQDAQVQ 449

Query: 217 ---GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
              G+ +  D   ++  W  +     TT G+ D  +   A+++P  + V G DI+ F   
Sbjct: 450 AGEGVSLTQDED-VLDTWFSSALWPFTTLGWPDRTE-ELARYYPTSVLVTGFDIIFFWVA 507

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +         ++P    +        KG+K+SKS GN +DP++++ E G DA R  +  
Sbjct: 508 RMMMMGLHFMDDVPFRTVLIHGLVRDEKGQKMSKSKGNGLDPLDLVAEFGADATRLAICA 567

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               G+D    +  +++  +      + N  +R + M               +     IL
Sbjct: 568 GTGPGRDIKLGRKRVEE--HRAFVTKLWN-AARFLEMNGAKPTEDFDPASVKSALGRWIL 624

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  +  + E    +         +     V     D + +  KP  +     +  + +  
Sbjct: 625 TEANDAITEAGRALSVYRFDEYASCCYRFVWSRFCDWFVEFSKP--VFAAENEETAELRA 682

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
           V+  V+  +  L+Q  +P +   ++  L      E   +  +  
Sbjct: 683 VSAHVLGLILRLMQPVIPFVTATLWQELGYPGKFEEIRWPEIMT 726



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 22/174 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH+   ++ D+L R+ R +G +VL+  GTD  G       + 
Sbjct: 34  EPFSIMFPPPNVTGTLHLGHSLNFVLQDMLIRWKRQEGFNVLWQPGTDHAGIATQMVVER 93

Query: 65  AG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A                        + +     +  R +    D   + F  T +     
Sbjct: 94  ALDKEGTSRTALGREGFLERVWDWKQEYGGTIVKQLRKLGASADWERERF--TMDDGLSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             R ++  + ++G IY+      +  +  +  +D EV              P++
Sbjct: 152 AVRKVFVTLYNEGLIYRDRRLVNWDPKFRSAISDLEVENHETKGSMWYIRYPLE 205


>gi|54293703|ref|YP_126118.1| valyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822435|sp|Q5WYI0|SYV_LEGPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53753535|emb|CAH14990.1| valyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 921

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 112/358 (31%), Gaps = 56/358 (15%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI----KIPD 222
           +  + +Q             +    R         +     S +   F   I     +  
Sbjct: 383 WDKTYFQWMDNIEDWCISRQLWWGHRIPAWYDNHGNIYVGYSENDVRFKHKIDQSTPLKQ 442

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           D   ++  W  +     +T G+ +       +F+P  + V G DI+ F    +       
Sbjct: 443 DED-VLDTWFSSALWPFSTLGWPERTP-ELEQFYPTSVLVTGFDIIFFWVARMIMMGLKF 500

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
           +  +P  +   +      +G K+SKS GNV+DP+++++                      
Sbjct: 501 TGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIELDSLIAKRTSNLMLNSVRD 560

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G++  +D   ++     +  N + N   
Sbjct: 561 RITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEG--YRNFCNKLWNAAR 618

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +    ++          ++ +D+ ILS     + ++    +          +   V  
Sbjct: 619 YVLLNTDEEQIDFGDGAFQYSPADQWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWH 678

Query: 424 --VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  KP      +    S          + V+ Q+  LL   +P +  +I+ 
Sbjct: 679 EYCDWYLELSKP---ILQDDQALSAMKRGTRRTLIHVLDQILKLLHPLMPFITEEIWQ 733



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
           E ++  I           H+GH ++  I D L R+HR+ G   L+  GTD  G      +
Sbjct: 29  EGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALTRYHRMLGDKTLWQPGTDHAGISTQLVV 88

Query: 59  AKAAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  GV+ K    +                 ++  R +   +D S + F  T ++  
Sbjct: 89  ERQLEAQGVSRKELTREQFLDKVWQWKEESGNTITQQMRRLGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ ++G IY+G     +  +     +D EV    +  +      PV   EE
Sbjct: 147 SAAVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSEE 206


>gi|9971928|gb|AAG10490.1|AF279106_52 predicted leucyl-tRNA synthetase (leuS) [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 804

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV++R+ R++  +V    G D  G     AA
Sbjct: 30  GREKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMNNFNVFQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V+ K + +QN  + +     L + YD    +RT E  ++   ++++KK  DKG +Y
Sbjct: 90  IANKVSPKDWTNQNIEHMKQQLISLGLGYDWSKELRTCEPEYYKWEQLIFKKFYDKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V  G   +        V+  E + +F +++ Y ++LL+  
Sbjct: 150 RKKSLVNWDPVDETVLANEQVIDGKGWRSGAQ----VEIKEIDQWFIKITDYAEELLTSL 205

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 206 DEVDWPENVKTMQRNWI 222



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 106/273 (38%), Gaps = 32/273 (11%)

Query: 228 MYVWIDALTNYLTTT--GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
              ++D+   Y   T     D      +K+W P DL++ G +    H +Y   F      
Sbjct: 478 FDTFMDSSWYYARFTSSDNADEMFDKNSKYWLPVDLYIGGIEHAILHLLYSRFFHKALRD 537

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +  N P  KK+ + G +L  G K+SKS GN +DP   IE+ G D +R +++      
Sbjct: 538 MDLVEGNEPF-KKLLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMMFTAPPE 596

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   + +  ++    +     I NLVS       K  D   P   +  E    +      
Sbjct: 597 QSLEWSESSVEGA--SRFMKKIWNLVSN-----RKFIDLEEPKDPSKQEV--ELRRKSHN 647

Query: 397 VLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            L+++  + +     + A+A ++ LV+ +        P   K+ N   ++   Y   E I
Sbjct: 648 TLKKVTNDFETRYSFNTAIASIMELVNFI--------PDSFKEGNASISN--QYCLNEAI 697

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             +   L    P ++  +++  +        +S
Sbjct: 698 IIILKTLNPIAPHISQHLWNNFYFDFAQEEIES 730


>gi|319406299|emb|CBI79936.1| Leucyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 892

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 6/209 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            EREK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     A
Sbjct: 49  SEREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENA 108

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V  KV+  +N    R     L  S D      T +  ++   ++L+     KG I
Sbjct: 109 AMQSKVHPKVWTYENITVMRKQLKKLGFSLDWSREFATCDVEYYHRQQMLFLDFYQKGLI 168

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V  G            V+  E   +FF++S + + LL+ 
Sbjct: 169 SRQVAKVNWDPVDQTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISDFSNDLLAG 224

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLS 208
            E   ++   +    +       GL    
Sbjct: 225 LEKLDQWPEKVRIMQKNWIGKSQGLLIRW 253



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 122/388 (31%), Gaps = 49/388 (12%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY--YNAQHNPVQWMEE 162
             R  +            C        D      D+V     G     + +   V     
Sbjct: 458 ISRQRYWGCPIPMIHCTDCGVVPVPCADLPVVLPDDVTFDQPGNPLARHDEWQTVVCPCC 517

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK------DLSLSRKTFDW 216
                R +   D  +     +  F  P  +           L        +  +     +
Sbjct: 518 GQLAKRETDTMDTFVDSSWYYARFTTPYAQEPIDQKIAAQWLPVQQYIGGIEHAILHLLY 577

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIY 274
                   + I YV +D     L T G + +      K W  PAD+ ++ KD        
Sbjct: 578 ARFFTRAMKMIGYVSVDEPFKGLFTQGMVVHETYQDEKGWVSPADVEIVEKD-------- 629

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                 +  L    +V          EK+SKS  NV+DP ++I   G D +R+F++ +  
Sbjct: 630 --GKRCAYKLTDQSEVMIGSI-----EKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSP 682

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G++          +  LV+ S   +LK         GA  E  ++     
Sbjct: 683 PERDVIWTESGIEGAYR--FVQRVWRLVALSAP-VLKGVKSCAGQQGAALELSKA----A 735

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL----VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            R L  + ++++    +RA+A++  L     S ++            +   D   +    
Sbjct: 736 HRTLCAVEDDLEKLAFNRAVARLYELLNVIASSLNN----------IENAEDEMKSA--- 782

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     ++   VP LA +    L 
Sbjct: 783 LRQAVDFFIAMIAPMVPHLAEECHAALG 810


>gi|52840956|ref|YP_094755.1| valyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296746|ref|YP_123115.1| valyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822629|sp|Q5X728|SYV_LEGPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81823457|sp|Q5ZXL2|SYV_LEGPH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52628067|gb|AAU26808.1| valyl tRNA synthase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|53750531|emb|CAH11933.1| valyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 921

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 112/358 (31%), Gaps = 56/358 (15%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI----KIPD 222
           +  + +Q             +    R         +     S +   F   I     +  
Sbjct: 383 WDKTYFQWMDNIEDWCISRQLWWGHRIPAWYDNHGNIYVGYSENDVRFKHKIDQSTPLKQ 442

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
           D   ++  W  +     +T G+ +       +F+P  + V G DI+ F    +       
Sbjct: 443 DED-VLDTWFSSALWPFSTLGWPERTP-ELEQFYPTSVLVTGFDIIFFWVARMIMMGLKF 500

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------------- 319
           +  +P  +   +      +G K+SKS GNV+DP+++++                      
Sbjct: 501 TGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLDSLIAKRTSNLMLNSVRD 560

Query: 320 ----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G++  +D   ++     +  N + N   
Sbjct: 561 RITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEG--YRNFCNKLWNAAR 618

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
             +    ++          ++ +D+ ILS     + ++    +          +   V  
Sbjct: 619 YVLLNTDEEQIDFGDGAFQYSPADQWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWH 678

Query: 424 --VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  KP      +    S          + V+ Q+  LL   +P +  +I+ 
Sbjct: 679 EYCDWYLELSKP---ILQDDQALSAMKRGTRRTLIHVLDQILKLLHPLMPFITEEIWQ 733



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
           E ++  I           H+GH ++  I D L R+HR+ G   L+  GTD  G      +
Sbjct: 29  EGKRFCIMLPPPNVTGSLHMGHGFQHTIMDALTRYHRMLGDKTLWQPGTDHAGISTQLVV 88

Query: 59  AKAAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  +  GV+ K    +                 ++  R +   +D S + F  T ++  
Sbjct: 89  ERQLEAQGVSRKDLTREQFLDKVWQWKEESGNTITQQMRRLGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ ++G IY+G     +  +     +D EV    +  +      PV   EE
Sbjct: 147 SAAVQKVFVQLYEEGLIYRGTRLVNWDPKLGTAVSDLEVLSEEEDGFLWHIRYPVVDSEE 206


>gi|229592789|ref|YP_002874908.1| leucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511549|sp|C3K2L2|SYL_PSEFS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229364655|emb|CAY52580.1| leucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 868

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIAYMKNQLRSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LLS  
Sbjct: 151 KKSGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DDLPGWPEQVKTMQRNWIGKSKGM 230



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 116/396 (29%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIIHCESCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + S A  W P D +
Sbjct: 480 -----ECSCPKCGQPAKRETDTMDTFVESSWYYARYASPHYEGGLVEKSAADHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVSSNEPFKNLLTQGMVVAETYYRREANGAYTWFN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       ++  G        EK++KS  N +DP  +I++ G D  R F+
Sbjct: 595 PADVELERDSKAKVISAKLIADGLPVEIGGTEKMAKSKNNGVDPQSMIDQFGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++              + R   +        +P      A ++ 
Sbjct: 655 MFASPPDMSAEWSDSGVEGS---------HRFLKRVWRLAHAHISQGLPGKLDVAALSDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            + I       +++  +++ QN   + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKLIRRSIHLAIKQASQDVGQNHKFNTAIAQVMTLMNVL-----EKAP---QATEQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  + +LL    P +++ +++ L  +D
Sbjct: 757 ----LVQEGLETVTLLLAPITPHISHDLWNRLGHSD 788


>gi|145636107|ref|ZP_01791777.1| bifunctional indole-3-glycerol phosphate
           synthase/phosphoribosylanthranilate isomerase
           [Haemophilus influenzae PittHH]
 gi|145270629|gb|EDK10562.1| bifunctional indole-3-glycerol phosphate
           synthase/phosphoribosylanthranilate isomerase
           [Haemophilus influenzae PittHH]
          Length = 954

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 144/427 (33%), Gaps = 90/427 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V +I +  D      
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV-LINEKLDLSQGEI 671

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 672 -EFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGFMLHK 501
            GF L  
Sbjct: 790 SGFDLEA 796



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|85704104|ref|ZP_01035207.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671424|gb|EAQ26282.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 889

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 29  ETRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKIATGHNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  +G   K +   N  + R     L +S D      T +  ++   + L+    + G +
Sbjct: 89  AMASGGHPKDWTYSNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEHGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  E   +FFR+S + + LL  
Sbjct: 149 YRKNAVVNWDPVDMTVLANEQVIDGKG----WRSGAEVERRELTQWFFRISDFAEDLLEA 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            +    +   +    E       GL+
Sbjct: 205 LDRLDNWPAKVRLMQENWIGKSRGLQ 230



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 30/177 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP  +I + G D  R+F++ +    +D  +   G +              
Sbjct: 661 KMSKSKKNVVDPSTIIAQYGADTARWFVLSDSPPERDVEWTASGAEAA---------HRH 711

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR   +  +    +  +    T  D+++L    + + E+ + + +   + A+A++ +  
Sbjct: 712 LSRVWRIAAE----IAASDAPATLDDDTLLREMHKCIDEVTKGIDSFGFNAAIARLYAFT 767

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +             L K+   + +          R LA L+    P LA  I+ +L 
Sbjct: 768 N------------TLAKSQAGQGAKTT-----AARALAQLMSPMTPHLAEDIWAMLG 807


>gi|254253255|ref|ZP_04946573.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895864|gb|EAY69744.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 864

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIEYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 63/362 (17%), Positives = 119/362 (32%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A     +       
Sbjct: 467 SGNPLAKSEAFLNCTCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDADTMVD-SRTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETFY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D  R       A                  +L   EK+S
Sbjct: 580 REDAAGKKTWYNPADVTVTHDDKGRPVGATLNADG-------------QPVVLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S    + D           A  E+D+++      VL++   + Q    +  ++  + +
Sbjct: 678 VWSFGYANRDALAARAGFDAAALGEADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPGVLREAYGVLLRVLYPVVPHITFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|295106213|emb|CBL03756.1| leucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 857

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+   H+GH     I DV+AR+ ++ G DVL   G D  G     AA
Sbjct: 30  SKPKRYVLEMFPYPSGDIHMGHVRNYTIGDVIARYSKMRGFDVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT---TEKRHHDTCRILWKKISDKGDI 119
                    +  +N    +     +  SYD + RT    +  ++   + ++ ++  KG +
Sbjct: 90  IKHHSHPAKWTYENIDTQKASFKRMGFSYD-WDRTVVACDPEYYRWGQWIFLQMWKKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +    E    +++V +G         H  V+  +   ++ +++ Y  +LL  
Sbjct: 149 ERRNSPVNWCPNCETVLANEQVTEGT----CWRCHGAVEKRDLTQWYLKITDYAQELLDD 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +++          G
Sbjct: 205 LDQLDGWPERVKQMQANWIGRSEG 228



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 100/275 (36%), Gaps = 31/275 (11%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y             KA  W P D ++ G +    H +Y   
Sbjct: 513 KRETDTMDTFTCSSWYYLRYTDPHNDELPFAPEKANRWLPVDQYIGGIEHAILHLLYSRF 572

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F        ++  + P    +         GE +SKS GNVI P ++I E G DA+R ++
Sbjct: 573 FTKVLRDLGMVDFDEPFANLLCQGMVKDEHGETMSKSKGNVIAPEDMIAEYGADAVRAYI 632

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFT---- 384
           +      KD  +D+ GL             N   R V  ++ +  D  +  PGA      
Sbjct: 633 LFMAPPDKDLLWDEGGLAG------IYKFMNRAWRIVCDLVGQAGDETLYQPGASEAEGV 686

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E+ ++++    RV  ++ ++      + A+A ++ L +    Y        L+K +P+  
Sbjct: 687 EALKTLVRERHRVAGKVVDDFDRNNFNTAIAAIMELCNAAADY--------LRKCSPEER 738

Query: 445 STVLYVTV---EVIRQLAILLQAFVPKLANKIFDI 476
           +          EV   +  L+    P  A +++  
Sbjct: 739 AACEGSRAIDPEVAEVIVKLMAPIAPHWAEELWSA 773


>gi|57234202|ref|YP_181754.1| isoleucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|84029514|sp|Q3Z7P5|SYI_DEHE1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57224650|gb|AAW39707.1| isoleucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 1014

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 70/410 (17%), Positives = 146/410 (35%), Gaps = 22/410 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQ 153
            +R H T    W+  S      K   Y    ++RDE    + ++        DG++ +  
Sbjct: 411 NERMHHTYPFCWRCDSPLIYYAKQSWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDWL 470

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            N + W      ++       +      +     +   +       ++  L         
Sbjct: 471 ENNIDWAFSRERYWGTPVPIWRCEKCGRTECVGGIDELKAKPNFKGMQEKLDIHRPYVDE 530

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPADLHVIGKD 266
           + +              +M  W D+    +    Y   P+    +K   +PAD      D
Sbjct: 531 WTYDCDKCGGNMKRVTEVMDCWYDSGAMPVAQYHYPFEPESRSIAKDGRFPADYICEAVD 590

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++++  + L+         +     +  +GEK+SKS  NVI P  V+++ G DA
Sbjct: 591 QTRGWFYSLHAISTLIFNRPCYQNVICLGHILDERGEKMSKSRNNVIQPATVLDKYGADA 650

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           +R++       G    +  + L   V       + N+ S  V+    + D   P+     
Sbjct: 651 VRWYFYTAAPPGNARRFS-EKLVGEVTRQFLLMLWNVYSFFVT--YANIDSFTPSEKYLE 707

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT 439
           G   E D  ILS  ++++ ++ + + N    +A  ++   V  + + Y    +    K  
Sbjct: 708 GEVPELDRWILSELNQLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSE 767

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           N     +        +  L+ LL  F P +A +++  L ++ +    +S+
Sbjct: 768 NDADKLSAYQALYTCLVTLSRLLAPFTPFVAEELYQNLVLSADPSALESV 817



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ ++  +       N +P I H    +  DV+ R+  + G       G D HG  +   
Sbjct: 36  RDGKRFTLYEGPPTANGRPGIHHVLSRVFKDVIPRYKVMKGYYAPRIGGWDTHGLPVELE 95

Query: 62  AQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                         +   +V + ++    +A  +D+  D+   T + 
Sbjct: 96  VEKELGFTSKNDIEKYGIAEFNARCRSSVFKYVSEWNKLTERIAYWVDL--DNAYITMDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++     K++ DKG +Y+G     +  R     +  EV +G  
Sbjct: 154 NYIESGWWALKQMWDKGLVYQGHRVTPHCPRCGTSLSSHEVAQGYK 199


>gi|225076336|ref|ZP_03719535.1| hypothetical protein NEIFLAOT_01380 [Neisseria flavescens
           NRL30031/H210]
 gi|224952321|gb|EEG33530.1| hypothetical protein NEIFLAOT_01380 [Neisseria flavescens
           NRL30031/H210]
          Length = 945

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 135/400 (33%), Gaps = 79/400 (19%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGTVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    +  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETEELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D            ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATETRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             + V+     LL   +P +  +++  +    + +   S+
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQTVAPLCDAKTADSI 778



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGYNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|189030336|sp|Q2GDQ6|SYL_NEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 831

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + HIGH    +I DVLAR+ R  G +VL   G D  G    KAA
Sbjct: 25  QRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N+ +  +++ ++N    R     + +SYD    + T   ++++  +  +      G  Y
Sbjct: 85  INSNIHPRIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAGLAY 144

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   +F ++S + ++LL   
Sbjct: 145 RKNSEVNWDPIDKTVLANEQVIDG----RGWRSGAVVVKRKIPQWFLKISDFSEELLKGL 200

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ES   +   ++           G
Sbjct: 201 ESLTGWPEKVKTMQTNWIGKSEG 223



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 112/372 (30%), Gaps = 82/372 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV + E+          Q   +          LP E    V      
Sbjct: 424 WGISRQRYWGCPIPVVYCEKCS-------MQPVKVEDL----PVTLPEEVEFTVQGNPLE 472

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  +      G     D       + ++   +               K + P D++
Sbjct: 473 HHPTWKYTNC-PKCGGPAVRDTD-TFDTFFESSWYFAAFCSKEGGIVKESCKRFLPVDMY 530

Query: 262 VIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI----------------- 296
           + G +    H +Y   F  + N         P    +                       
Sbjct: 531 IGGIEHAILHLLYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNSSGEYLYPEEA 590

Query: 297 ---LHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              L KGEK        +SKS  NV+D  E++ + G DA R+F++ +        +   G
Sbjct: 591 KSLLEKGEKVLVGKIEKMSKSKKNVVDLEEIVSKYGADAARFFILSDNPPENSFGWSDRG 650

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +           I NLV R +S                 ++ +++    ++++ ++ + M
Sbjct: 651 INASF--KFLQRIKNLVERYLS----------SKNSGEVQTGQNVKIQINKIICDMTKYM 698

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               ++ A+A++  LV+                      S    ++ E I  L  +L+ F
Sbjct: 699 DEIKLNCAVAKIHELVNL--------------------LSASGALSKETIHVLLRILEPF 738

Query: 466 VPKLANKIFDIL 477
            P LA  +   L
Sbjct: 739 APHLAEYLASKL 750


>gi|266621202|ref|ZP_06114137.1| isoleucine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288867131|gb|EFC99429.1| isoleucine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 1044

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/404 (12%), Positives = 126/404 (31%), Gaps = 13/404 (3%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
           +      +    W+  +      +  +    +   E    ++            G++ + 
Sbjct: 376 SAPVFEHSYPHCWRCDTPLIYYARESWFIKMTDVKEDLIRNNNTINWIPESIGKGRFGDW 435

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N             +++
Sbjct: 436 LENVQDWGISRNRYWGTPLNVWECECGHQHAIGSIEELKSMSPNCPDDIELHRPYIDAVT 495

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G ++   P+ ++  W D+ +       Y         + +PAD      D    
Sbjct: 496 ITCPKCGKQMKRVPE-VIDCWFDSGSMPFAQHHYPFENKELFEQQFPADFISEAVDQTRG 554

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L+    P    +         G+K+SKS GN +DP + +EE G DA+R++
Sbjct: 555 WFYSLLAISTLIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFQALEEFGADAIRWY 614

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTES 386
                A      +    + +     +           +   + ++D              
Sbjct: 615 FYINSAPWLPNRFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDEFDATKYKLEYDKLPVM 674

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + +++ +  N+ N  I  A   +   V ++ + Y    +     K       
Sbjct: 675 DKWLLSKLNTLIKTVDGNLGNYQIPEAARALQEFVDDMSNWYVRRSRERFWAKGMEQDKI 734

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  ++ +    +P +  +I+  L    +    +S+
Sbjct: 735 NAYMTLYTALVTVSKVAAPMIPFMTEEIYQNLVCNIDKNAPESI 778



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +PHIGH    +I D++ R+  + G DV    G D HG  +   
Sbjct: 36  KKAETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGCDVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      DD   T E  +
Sbjct: 96  VEKMLGLDGKEQIEEYGLEPFIKHCKESVWKYKGMWEDFSKTVGFWADMDDPYVTYENYY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKQIWEKGLLYKGFKIVPYCPRRGTPLSSHEVAQGYK 199


>gi|319780907|ref|YP_004140383.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166795|gb|ADV10333.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 874

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 6/208 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN    R+   V+ +S D      T +  ++   ++L+    +KG + +
Sbjct: 93  QNKVHPKEWTYQNIATMREQLKVMGLSLDWAREFATCDVDYYHRQQMLFLDFVEKGLVMR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR++ +   LL   E
Sbjct: 153 KSSKVNWDPEDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFRITDFAQDLLDSLE 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSL 209
              E+   ++   +       GL     
Sbjct: 209 GLDEWPEKVKLMQQNWIGRSEGLLIRWP 236



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 126/407 (30%), Gaps = 85/407 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L           P++R       VK 
Sbjct: 432 WGISRQRYWGCPIPMIHCEACGVVPVPKADLPVKLPDDVDFDRPGNPLDRHPTW-RHVKC 490

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPA 258
                   R+T              M  ++D  + Y          + +  K    + P 
Sbjct: 491 PQCGRDARRET------------DTMDTFVD-SSWYFARFTAPWAHEPTDPKAANEWLPV 537

Query: 259 DLHVIGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKG----------- 300
           D ++ G +    H +Y   F  +             K +F+ G ++H+            
Sbjct: 538 DQYIGGIEHAILHLLYSRFFTRAMREAGHVDLAEPFKGLFTQGMVVHETYRVGSASNGRW 597

Query: 301 -------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                          EK+SKS  N + P ++ +  G D  R+F+
Sbjct: 598 LAPTEVRLEDVDGKRSAIEIATGETVSIGPLEKMSKSKKNTVSPEDITDGYGADTARWFM 657

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           + +    +D  +  DG            I  LVS +   +          P A +  + +
Sbjct: 658 LSDSPPERDVEWTDDGAAGAHR--FIQRIWRLVSTAAETLA------GIKPVAASSGEAA 709

Query: 390 ILSVC-SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           ++S    ++L+ + E+++    +RA+A++  L + +    +               + + 
Sbjct: 710 VVSKAAHKILKAVGEDIEKLAFNRAIARIYELANALTTPLNEVA-------EGKADAALK 762

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
               + +  L  L+   +P LA + +  L   D    R +   D  L
Sbjct: 763 GACRQAVEILVHLIAPVMPHLAEECWATLGGTDLVAERPWPVFDPAL 809


>gi|296085363|emb|CBI29095.3| unnamed protein product [Vitis vinifera]
          Length = 963

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 125/366 (34%), Gaps = 37/366 (10%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESH--PEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           P ++ +   ++             +  H  P + +  +   E     ++  + L  +++ 
Sbjct: 438 PERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEK 497

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           +   ++I  +P  ++  W  +     +T G+ D       KF+P  +   G DIL F   
Sbjct: 498 YGKDVEIYQEPD-VLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVLETGHDILFF--- 553

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHK----------GEKISKSLGNVIDPIEVIEEVGVD 323
            W A ++   +     V      LH            EK+SK+LGNVIDPI+ I+E G D
Sbjct: 554 -WVARMVMMGIEFTGAVPFSYVYLHGLIRDSQASTMQEKMSKTLGNVIDPIDTIKEFGTD 612

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ L    A G+D     + L    N    N + N     +  +    D         
Sbjct: 613 ALRFTLALGTA-GQDLNLSTERLTS--NKAFTNKLWNAGKFVLQNLPSQSDISAWETILA 669

Query: 384 TESDE------------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
            + D+             ++S    ++  +  +           +          D Y +
Sbjct: 670 CKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIE 729

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           A K           A  V    + V   +  +L  F+P +   ++  L    E     S 
Sbjct: 730 ASKARLYHSGGHSVAQAV---LLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSW 786

Query: 490 DQRLKP 495
            Q   P
Sbjct: 787 PQTSLP 792



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   IS          H+GHA  + + D++ R+HR+ G   L+  GTD  G       + 
Sbjct: 87  DPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTLWIPGTDHAGIATQLVVER 146

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
              +                   + ++      +    L  S D      T +++     
Sbjct: 147 MLASEGIKRAELSRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWTREHFTLDEKLSWAV 206

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++ ++G IY+G Y   +S   +   +D EV  
Sbjct: 207 IEAFVRLHERGLIYQGSYMVNWSPNLQTAVSDLEVEY 243


>gi|30248461|ref|NP_840531.1| valyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|75541052|sp|Q82X51|SYV_NITEU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30138347|emb|CAD84355.1| probable valyl-tRNA synthetase (valine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 918

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 129/394 (32%), Gaps = 77/394 (19%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
            +  ++ M  + ++  +     + L+   S     +P      V +     ++D  +SR+
Sbjct: 353 TNTVIEPMLTDQWYLAMEGLAKQGLAVVASGKVRFVPENWT-HVYNQWLENIQDWCISRQ 411

Query: 213 TFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYL 245
              WG  I    D                            ++  W  +     +T G+ 
Sbjct: 412 -LWWGHRIPAWYDEDGNVTVAHDLEEARKLSGKEILRQDDDVLDTWFSSALWPFSTLGWP 470

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +     K    P  + V G DI+ F    +   +   +  +P  +   +      +G+K+
Sbjct: 471 EQTPELKTFL-PGSVLVTGFDIIFFWVARMVMMSLHFTGEVPFREVYITGLIRDAEGQKM 529

Query: 304 SKSLGNVIDPIEVIEE-------------------------------------VGVDALR 326
           SKS GNV+DP+++I+                                       G DALR
Sbjct: 530 SKSKGNVLDPLDLIDGVSLTELIRKRTTGLMNPKQAESIEKTTRKQFPQGIPAFGTDALR 589

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFT 384
           +      + G+D  +D    +     +  N + N  +R V M    KD       P  F+
Sbjct: 590 FTFASLASHGRDIKFDLQRCEG--YRNFCNKLWN-ATRFVLMNCEGKDTGLDETLPLNFS 646

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
           ++D+ I+    +  Q + +         A  ++   V +   D Y +  K  +L   +  
Sbjct: 647 QADKWIVGRLQQAEQGVVQAFDEYRFDLAAREMYEFVWDEYCDWYVELAKV-QLSSADEA 705

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                    V V+     L    +P +  +++  
Sbjct: 706 HQRATRRTLVRVLEAALRLAHPIIPFITEELWQA 739



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K  +   I           H+GHA++  + D L R+HR+ G + L+  GTD  G      
Sbjct: 32  KGADPYCIMLPPPNVTGTLHMGHAFQHTLMDALIRYHRMLGDNTLWQPGTDHAGIATQIV 91

Query: 60  -----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKR 101
                            +A        K       +R  R M    D S + F  T ++ 
Sbjct: 92  VERQLDQEGKDRRQMGREAFLERVWQWKEESGSTITRQMRRMGASCDWSRERF--TMDET 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                  ++ ++  +G IY+G     +    +   +D EV    +         P + +E
Sbjct: 150 LSRAVTEVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLEVVSVEEQGSLWHILYPFEQLE 209


>gi|15676101|ref|NP_273232.1| valyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|12585348|sp|Q9K1H7|SYV_NEIMB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|7225392|gb|AAF40631.1| valyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316985697|gb|EFV64643.1| valyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325141187|gb|EGC63687.1| valyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199387|gb|ADY94842.1| valyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 945

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDNEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|331092070|ref|ZP_08340901.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330402271|gb|EGG81842.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 1035

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 74/505 (14%), Positives = 157/505 (31%), Gaps = 38/505 (7%)

Query: 3   EREKLYISTAIAYP----NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
            ++  Y++              HI  A+    A V  ++      D+ F    DE G+  
Sbjct: 294 NKKAYYVTCDTYVTLTDGTGVVHIAPAFGEDDAQVGRKY------DLPFLQLVDEKGEMA 347

Query: 59  AKAAQNAGVTTKV--FVDQNSRNFRDMADVLDI--SYDDFIRTTEK-RHHDTCRILWKKI 113
            +         K   FV ++      +    +   SY    R      ++       K  
Sbjct: 348 EETPWKGVFCKKADPFVLEDLEKRGLLFSAPNFEHSYPHCWRCDTPLIYYARESWFIKMT 407

Query: 114 SDKGDIYKGCYSGWYSLR---DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           + K D+ +   +  +         + +  E  +            P+   E E       
Sbjct: 408 AVKDDLIRNNNTINWIPESIGKGRFGDWLENVQDWGISRNRYWGTPLNVWECEC------ 461

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                    +       L     N              ++ K    G ++   P+ ++  
Sbjct: 462 ------GHMHSIGSIAELKEMSDNCPDDIELHRPFIDKVTIKCPHCGKEMHRVPE-VIDC 514

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           W D+         Y         + +PA+      D     F+++   + L+    P   
Sbjct: 515 WFDSGAMPFAQHHYPFENKELFEQQFPANFISEAVDQTRGWFYSLLAISTLVFNEAPYKN 574

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        KG+K+SKS GN +DP E +E+ G DA+R++     A      +    +  
Sbjct: 575 VIVLGHVQDEKGQKMSKSKGNAVDPFEALEQYGADAIRWYFYINSAPWLPNRF-HGKIVT 633

Query: 349 RVNADLANGIGNLVSRSV-SMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENM 405
                    + N  +  V    + ++D    T      T  D+ +LS  + +++ +  N+
Sbjct: 634 EGQRKFMGTLWNTYAFFVLYANIDEFDATKYTLEYDKLTVMDKWLLSKLNTLIKTVDNNL 693

Query: 406 QNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +N  I  +   +   V ++ + Y    +     K                +  +A +   
Sbjct: 694 ENYRIPESARALQEFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTVAKVAAP 753

Query: 465 FVPKLANKIFDILFVADENRCFQSL 489
            +P +   I+  L  + +    +S+
Sbjct: 754 MIPFMTEDIYQNLVRSIDTNAPESI 778



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 62/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRH 102
            +                       K  V +    + D +  +    D      T +   
Sbjct: 96  VEKLLGLDGKEQIEEYGLEPFISHCKESVWKYKGMWEDFSATVGFWADMEHPYVTYDNNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 156 IESEWWALKQIWDKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYKDVKEKSAIVRFKVKDE 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DAYILAWT 223


>gi|328675383|gb|AEB28058.1| Valyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 919

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                  K++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 QTP-ELEKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I +V +  + ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWTVLNTAIADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAK--VTLKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                   +K++  +       +   R +    D   + F  T +   
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKIWEWKELSGGTITSQMRRIGASPDWDRERF--TMDDGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            D  +  + K+ + G  Y+G     +  + +   +D EV +            PV   EE
Sbjct: 153 SDAVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVADSEE 212

Query: 163 E 163
           +
Sbjct: 213 K 213


>gi|262371890|ref|ZP_06065169.1| valyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311915|gb|EEY93000.1| valyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 965

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/405 (16%), Positives = 131/405 (32%), Gaps = 89/405 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++      +   +      +P +  N  +S++K  ++D  +SR+   W
Sbjct: 380 VEPLLTDQWYVKIAPLAAPAIDAVQDGRIKFVPEQYTNMYMSWMKD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 438 GHRIPAWYDAEGNVYVGRNEEEVRAKNNIAADIELNQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           +     A  +     P D+ V G DI+ F         +           +P        
Sbjct: 498 DAQKDAANDFLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQVPFKTVYVHG 557

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE---------------------------------- 319
                +G+K+SKS GNV+DP+++I+                                   
Sbjct: 558 LVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEG 617

Query: 320 ---VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G DA+R+        G+D  +D   ++     +  N I N     +  +     G 
Sbjct: 618 INAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQ 675

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
              P  +   ++ I+S   +    + +      +  A   +   +     D Y +  KP 
Sbjct: 676 EARPDLWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKP- 734

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VLNDANVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 779



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       +R  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGINRHDLGREKFIDKVWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ K+ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|289209292|ref|YP_003461358.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288944923|gb|ADC72622.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 863

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+ + H+GH     I DV+ARF R+ G  VL   G D  G     AA  
Sbjct: 33  EPFYCLSMFPYPSGKLHMGHVRNYTIGDVIARFQRMQGRSVLQPMGWDAFGLPAENAAMQ 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +  QN    R     L  +YD      T +  ++   + L+ ++  KG +Y+ 
Sbjct: 93  NHVPPAAWTRQNIEQMRTQLKRLGFAYDWSREFATCDADYYRWEQWLFVRLLKKGLVYRK 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V +G            V+  E   +F R++ Y D+LL   + 
Sbjct: 153 KATVNWDPVDQTVLANEQVIEG----RGWRSGALVERREMPQWFLRITDYADELLEALDG 208

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +            G
Sbjct: 209 LNGWPDQVRTMQRNWIGRSEG 229



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE  G D  R F +          +   G++       A+    
Sbjct: 619 EKMSKSKNNGVDPQALIERFGADTARLFTMFAAPPDLSLEWSDSGVEG------AHRFIK 672

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            + R+V   +           A  ++   +       + ++ +++  +   + A+A  + 
Sbjct: 673 RLWRAVHEHVNGDAPGALEVDALDDAGRELRRKLHDTIAKVTDDIGRRQTFNTAVAANME 732

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ ++             P  A  V  V  E +  +  +L   +P +   ++  L  
Sbjct: 733 LLNDLGKF-------------PKDAPLVAVVRQEALEGIVRMLAPIIPHVTETLWRALGH 779

Query: 480 AD--ENRCFQSLDQR 492
            +      + ++D+ 
Sbjct: 780 DELVATTAWPTVDEA 794


>gi|148825930|ref|YP_001290683.1| valyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|172047919|sp|A5UBZ9|SYV_HAEIE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|148716090|gb|ABQ98300.1| valyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 954

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 75/421 (17%), Positives = 141/421 (33%), Gaps = 61/421 (14%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y +   +   A     + +   V    E  YF  +   QD  +S         +P  
Sbjct: 386 DQWYVSVKPLADVAIKAVEDCEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHR-IPAW 444

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
              E   +V     ++  S+   D+ +++  D   ++  W  +     +T G+ +     
Sbjct: 445 YDTEGNVYVARNETEVR-SKYNLDFAVELKQDED-VLDTWFSSGLWTFSTLGWPEQTKEL 502

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKI 303
           K    P D+ + G DI+ F       F +           +P      +      +G+K+
Sbjct: 503 KMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKM 561

Query: 304 SKSLGNVIDPIEVIEEV-------------------------------------GVDALR 326
           SKS GNV+DPI++I+ +                                     G DALR
Sbjct: 562 SKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFADGIAAHGTDALR 621

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + L    + G+D  +D   L+     +  N + N     ++    D          F+ +
Sbjct: 622 FTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---EIEFSLA 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D  I S  +R ++  R ++           +         D Y +  KP      N  + 
Sbjct: 677 DRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFANGNAAQI 735

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLKPGFMLH 500
                  V V+ +L  L    +P +  +I+      + +  ++   Q   Q  + GF L 
Sbjct: 736 RAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEESGFDLE 795

Query: 501 K 501
            
Sbjct: 796 A 796



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIGAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|296225004|ref|XP_002758315.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 902

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+    + +F + +AY   +   
Sbjct: 198 YQEEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLKQWFIKTTAYAKAMQDT 254

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 255 LADLPEWYGIKGMQAHWIGDC 275



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 106/326 (32%), Gaps = 63/326 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          D + A +W P DL++ GK
Sbjct: 501 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFDTALADYWMPVDLYIGGK 560

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 561 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQCLQREEVDLTG 620

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     +     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 621 SVPVHAKTKEELEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-- 678

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   +  +++         + V+ +
Sbjct: 679 -VKTDALPGVLRWQQRLWALTTRFIEARASGKAPQPQLLSNKEKAEARKLWEYKNSVISQ 737

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +  ++  ++ A++Q++ L S +     A +   L     + A          +  L 
Sbjct: 738 VTTHFTEDFSLNSAISQLMGLSSTLS---QASQRVLLHSPEFEDA----------LCALM 784

Query: 460 ILLQAFVPKLANKIFDILFVADENRC 485
           ++     P + ++I+  L +     C
Sbjct: 785 VMAAPMAPHITSEIWAGLALVPRKLC 810


>gi|217967811|ref|YP_002353317.1| isoleucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336910|gb|ACK42703.1| isoleucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 975

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 80/462 (17%), Positives = 159/462 (34%), Gaps = 17/462 (3%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F      D+ F    D++G+ I    +       +F+ +      +     ++   +   
Sbjct: 328 FQLGKKYDLPFLQPVDQNGKFI----KEIKPWAGMFIKKADPLIIEYLKERNLLLKEEKY 383

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T                  +   Y    +    L +     +       +G++ N   N 
Sbjct: 384 THT-YPFCWRCDTPLIYYARSSWYIKTTAIKEDLLNNNRKINWYPEHIKEGRFGNWLANN 442

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           + W      ++          S                +  +F         ++ K    
Sbjct: 443 IDWALSRERYWGTPLPIWVCDSCGHEECIGSYEELGITDTKNFDPHKPYIDQITLKCPKC 502

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYW 275
           G  +   P+ ++  W D+    +    Y           +PAD      D  R +     
Sbjct: 503 GGTMHRVPE-VIDCWFDSGAMPVAQWHYPFENQEEFKASFPADFICEAIDQTRGWFYSLL 561

Query: 276 PAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L  N P  K V     +L  KGEK+SK  GNV+DP  ++ + G DALR+++     
Sbjct: 562 AISTLVFNEPAYKNVLVTELVLDEKGEKMSKHKGNVVDPWIILNKYGADALRWYIFTVSP 621

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESIL 391
                 +  D + + +   L      +   S+   +  +D     +P       SD+ I+
Sbjct: 622 PWVPLRFAPDAVNEALKKFLLTLWNTVSFFSIYAEIDGFDPNSHFVPFNELEDHSDKWII 681

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTV 447
           S  + ++ +++ +M+N    +A   + S V     + Y   + ++ W+ +K       T 
Sbjct: 682 SRLNSLIVKVKNDMENFNATQAARSIQSFVIDDLSNWYIRLNRERFWKSEKDKDK--WTA 739

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             VT  VI++L+ L+  F+P  A KI+  +    E    +S+
Sbjct: 740 YTVTYTVIKELSKLIAPFIPFTAEKIYQEIVRVAEKNSPESV 781



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +          N +PH GH    I  D+  R+  + G  V    G D HG  +   
Sbjct: 36  KGSPRFNFYEGPPTANGKPHAGHVLPRIYKDLFPRYKTMQGYYVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V +  R +R   + +   I  D+   T    +
Sbjct: 96  VEKELGLNSKQDIEKYGVEEFNKKCKESVFRYEREWRRFTERIGFWIDMDNPYITLSNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   L KKI +KG +YKG     +  R E   +D EV +G       +     +  ++
Sbjct: 156 IESVWWLIKKIWEKGLLYKGYKIVPWCPRCETALSDHEVAQGYKETEDPSIFVKFRVKDQ 215

Query: 163 EGYFF 167
           E  +F
Sbjct: 216 ENTYF 220


>gi|189502590|ref|YP_001958307.1| valyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|254783549|sp|B3ETM6|SYV_AMOA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189498031|gb|ACE06578.1| hypothetical protein Aasi_1256 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 877

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 138/383 (36%), Gaps = 53/383 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           Y +      ++       H  V+    + +F R+         +   +     P +    
Sbjct: 330 YLEKIEPYTSNIGLSERTHAVVEPRLSKQWFVRIQELAKPAFEHVLDNTIQFHPAKF-KH 388

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI-----------------------PDDPQY------ 226
           +     + ++D  +SR+   WG +I                         +P Y      
Sbjct: 389 MYQAWLNNVRDWCISRQ-LWWGHQIPAFYLPDGTVIVAEDKAAALAKAHMNPVYKNLTEA 447

Query: 227 -------IMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
                  ++  W  +    ++    + +  +     F+P  + V   +I+ F    +   
Sbjct: 448 DIRQDEDVLDTWFSSWLWPISVFDGFGNPENQDIQYFYPTQVLVTAPEIIFFWVARMIMA 507

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            +  +  LP     F+       G+K+SKSLGN  +PI++I++ G D +R  ++     G
Sbjct: 508 GYAFTNRLPFKHVYFTGIVRDKLGKKMSKSLGNSPEPIDLIKQYGADGVRVGMLFSSPAG 567

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  +D    ++    + AN I N    +  +I         +    T +     +  ++
Sbjct: 568 NDLLFDIKLCEQ--GRNFANKIWN----AFRLIKGWEVQAKSSQPDDTMAINWFEARFNQ 621

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           VL  I E+ +   I  AL  +  L+ +     Y +  KP   +  +P    T    TVE 
Sbjct: 622 VLTTIEEHFEQFRISDALMSIYKLIWDDFCAWYLEMVKPAYGEPISP----TTYAATVEF 677

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           + +L  +L  F+P +  +++  L
Sbjct: 678 LAKLLKILHPFMPFITEEVWHQL 700



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+E   I           H+GH     + DVL R  R+ G +  +  G D         
Sbjct: 32  SEKEPYTIVLPPPNITGVLHMGHVLNTTLQDVLIRKARMQGKEACWVPGIDHASIATETK 91

Query: 62  AQNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                                     + ++      +    L  S  +D    T +    
Sbjct: 92  VVAMLQAKGIQKKDLTREAFLAHAWEWKEKYGSIILEQIKQLGASCDWDRLHFTMDAGPS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  + ++ ++ +KG IY+G     +    +    DDEV  
Sbjct: 152 EAVKKVFIQLYEKGYIYQGKRMINWDPVGKTALADDEVNY 191


>gi|91225562|ref|ZP_01260636.1| valyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91189682|gb|EAS75956.1| valyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 952

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRTEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMAAN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVEGVEGETIMLQALPQFDEANF 790



 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+   + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKDKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|303322306|ref|XP_003071146.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110845|gb|EER29001.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320040674|gb|EFW22607.1| leucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 984

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 10/233 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     AA  
Sbjct: 70  EKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENAAIE 129

Query: 65  AGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +  +N    ++       D  +D    T     +   + L+  + +KG  Y+ 
Sbjct: 130 RGINPASWTKENIAKMKEQLKGLGTDFDWDREFMTCSPEFYKHTQRLFLMLHEKGLAYQA 189

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y   D+    +++V               V+  E + +FFR++A+++ LL   +S
Sbjct: 190 KAMVNYDPVDQTVLANEQVDAN---GRSWRSGAVVEKRELKQWFFRITAFKEALLKDLDS 246

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
                L     + ++S  +  L     +R TF            +     D L
Sbjct: 247 -----LASGWPDRILSMQRHWLGKSVGARLTFKIITPKERLNVQVFTTRADTL 294



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 87/222 (39%), Gaps = 25/222 (11%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP   IE+ G DA R  ++      +   +D+  +   +R  + L
Sbjct: 668 NISFEKMSKSKYNGVDPSTCIEKYGADATRAHILFAAPVSEILEWDETKIVGIQRWFSRL 727

Query: 355 ANGIGN----LVSRSVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
              I +    L+S  + +  ++     +  +P     ++ + ++L +    +  +   M+
Sbjct: 728 WKIISDSEKSLISAELGLSRENIRSANNLALPPLDELSDDEANLLLIAHSTITSVSSCME 787

Query: 407 N--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                ++  ++ +I   + +               +   + TVLY+    +  L  LL  
Sbjct: 788 KNPYALNTVISDLIKFTNAI------TSSALSLSPSSPASKTVLYML---VSSLLKLLAP 838

Query: 465 FVPKLANKIFDILFVA----DENRCFQSLDQRLKPGFMLHKT 502
             P  +++ ++ L  +    +EN    S+     P  +L + 
Sbjct: 839 IAPAFSSECWEQLHTSLLSKNENDQSLSIFSSPWPTPLLTEP 880


>gi|330505005|ref|YP_004381874.1| leucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328919291|gb|AEB60122.1| leucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 870

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNQVAPAKWTYENIAYMKSQLKSLGLAIDWTREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LLS  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYAEELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DELDGWPEQVKTMQRNWIGKSFG 229



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 79/185 (42%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I+  G D  R F++      +   +   G++         G   
Sbjct: 628 EKMSKSKNNGVDPQDMIDAYGADTCRLFMMFASPPDQSCEWSDAGVE---------GANR 678

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +     +  +P      +  +  +++       +++   ++ Q+   + A+AQ
Sbjct: 679 FLRRVWRLAHGHVNAGLPGKLDVASLNDEQKAVRRAIHLAIKQASNDIGQHHKFNTAVAQ 738

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +++            T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 739 VMTLMNVLEK--------AATATEQDRA-----LVQEGLEIVTLLLAPITPHISHELWQR 785

Query: 477 LFVAD 481
           L  AD
Sbjct: 786 LGHAD 790


>gi|298370336|ref|ZP_06981652.1| valine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281796|gb|EFI23285.1| valine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 945

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+ + V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSTVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWYIRYPL 203


>gi|114567117|ref|YP_754271.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317896|sp|Q0AWK4|SYL_SYNWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114338052|gb|ABI68900.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 824

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y      YP+   H+GH     I DV+ARF  ++G +VL   G D  G     AA
Sbjct: 31  EKPKYYNLEMFPYPSGHLHMGHVRNYAIGDVVARFKSMNGFNVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N  N +     + ISY  D  + T +  ++   + ++ K+ +    Y
Sbjct: 91  IKNAIHPATWTYSNIENMKRQLKTMGISYDWDRELATCKPDYYKFTQWMFLKLYENKLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +    +    +++V  GA           ++  + E +FF+++ Y  +LL   
Sbjct: 151 KKKSAVNWCPSCQTVLANEQVVDGA----CERCEAVIEKKQLEQWFFKITDYAQRLLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
              P +   ++   +       G
Sbjct: 207 ALLPGWPEKVKTMQKNWIGRSEG 229



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 125/358 (34%), Gaps = 44/358 (12%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           +   +    +       Y  +  PV   EEE   +       K    Y   P   L    
Sbjct: 422 DWLISRQRYWGAPIPIVYCPECGPVAVPEEELPLYLPEDIDFKP---YAESPLKHLERFY 478

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           +    S  K  L++                D       + D   +   +           
Sbjct: 479 KTTCPSCGKEALRE------------TDTMDTFVCSSWYFDRFCSPHESKQPFSREAVDY 526

Query: 253 AKFWPADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
               P D ++ G +    H +Y        +   +LS   P   ++ + G +L    K+S
Sbjct: 527 WM--PVDQYIGGVEHAILHLMYARFFTKFLFDINVLSCQEPFT-RLLTQGMVLKDNAKMS 583

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P E+I+  G D  R F++      +D  + + G++        N +  LVS 
Sbjct: 584 KSKGNVVSPEEIIDTYGADTARLFILFASPPERDLEWSEQGVEGAFR--FLNRVWRLVSE 641

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSE 423
               I KD       P   +E+ +++       ++++ E++ +    + A++ ++ L + 
Sbjct: 642 LAEGI-KDLPAAEHFPELDSEA-KNLRFKTHATIKKVTEDIGERFNFNTAISAIMELSNT 699

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  Y   +KP                V  E +  L ILL  F P +  +++ +   A+
Sbjct: 700 LGAYKGIKKPN-------------WPVVKEAVDNLLILLSPFSPHICEELWQLTGHAE 744


>gi|121602880|ref|YP_988442.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166230611|sp|A1UR39|SYL_BARBK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120615057|gb|ABM45658.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 875

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 6/208 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ + H+GH     + DV+AR+ R  G++VL   G D  G     AA
Sbjct: 32  EGEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGMNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  QN    R     L +S D      T +  ++   ++++  +  KG + 
Sbjct: 92  MQNKVHPKAWTYQNIAAMRKQLQKLGLSIDWSREFATCDVDYYHRQQMIFLDLYQKGLVV 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +FF+++ + + LL+  
Sbjct: 152 RKVAKVNWDPVDQTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITEFGEGLLARL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS 208
           +   E+   +    +       GL    
Sbjct: 208 DDLTEWPDKVRVMQKNWIGKSQGLYIRW 235



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 120/377 (31%), Gaps = 75/377 (19%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGL----KDLSL 209
                +      Y    +         ++P+ R +      E ++F + G      +   
Sbjct: 434 FRLRDWGVSRQRYWGCPIPMIHCAACGVVPVPRADLPVVLPEDVTFDRPGNPLARHETWQ 493

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKD 266
           +      G     +    M  ++D+   Y   T         +   A++ P   ++ G +
Sbjct: 494 TVACPSCGQPAKRETD-TMDTFVDSSWYYARFTAPWAQEPTDQDIAAQWLPVQQYIGGIE 552

Query: 267 ILRFHAIYWP--------AFLLSANLPLPK-----KVFSHGFILHKG------------- 300
               H +Y          A  ++A+ P         V    +   +G             
Sbjct: 553 HAILHLLYARFFMRAMKLAGHVNADEPFTGLFTQGMVVHETYRDAQGWVAPDEVSIVEQD 612

Query: 301 -------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                              EK+SKS  NV+DP ++I   G D  R+F++ +    +D  +
Sbjct: 613 GKRRAYKLTDQSEVTIGSIEKMSKSKKNVVDPDDIISSYGADTARWFMLSDSPPERDVIW 672

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G++       A+     V R V++       + P  G   E+   +     R L  +
Sbjct: 673 SESGIEG------AHRFVQRVWRCVALSAPILSTIEPCAGHQGEA-LELSKAAHRTLCAV 725

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++++    +RA+A++           +   P  L  T  D    +     + +     +
Sbjct: 726 EDDLEKLAFNRAVARLYEF-------LNIMAP--LLNTVADLDDEMKSALRQAMDFFCAM 776

Query: 462 LQAFVPKLANKIFDILF 478
           +   +P LA +    L 
Sbjct: 777 IAPMMPHLAEECHAALG 793


>gi|293370847|ref|ZP_06617392.1| valine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292634063|gb|EFF52607.1| valine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 878

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 128/393 (32%), Gaps = 66/393 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATAEEALAKAKEKTGNAALTIEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 530 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N                IPT      + +           E+ +      +  AL  V
Sbjct: 588 IWNAFRLIKGWTNAKGTIEIPTDAHL--AVQWFDQRLDAAAVEVADLFSKYRLSEALMLV 645

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      + +    +L  LL  F+P +  ++
Sbjct: 646 YKL------FWDEFSSWLLEIVKPAYGQPVNGFICSMVLSSFERLLELLHPFMPFITEEL 699

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  L   +                M+ + F+P+
Sbjct: 700 WQQLREREPGESL-----------MVTQLFEPV 721



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLFNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 845

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y      YP+ + H+GH     I DVLAR+  L G +VL   G D  G     A
Sbjct: 29  KSKKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKSLQGYNVLHPMGWDSFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   ++ K + + N  N +     L   I +D  I T    ++   +  + ++ DKG +
Sbjct: 89  ARQNNLSPKDWTESNISNMKSQLKRLGLSIDWDREISTCSVDYYKHQQEFFLELYDKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G   +        V+  +   +FF ++ + ++LL  
Sbjct: 149 YRKEQDVNWDPVDQTVLANEQVIDGKGWRSGAQ----VERKKLNQWFFNITKFSNELLES 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  ++   ++   +       G
Sbjct: 205 LDTLDQWPNKVKIMQKNWIGKSFG 228



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/394 (14%), Positives = 124/394 (31%), Gaps = 81/394 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E +             L   +       P++  NE  +   +
Sbjct: 423 WGISRQRYWGCPIPIIYDENKNPHKLPKEMLPAELPQIDKLQATGNPLDNENEWKNLKIN 482

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G K    +     +        ++          +Y     ++           P D ++
Sbjct: 483 GKKYTRETDTLDTFVDSSWYFLRFCSPKNSQYGFSYEDINYWM-----------PVDQYI 531

Query: 263 IGKDILRFHAIYWPAFLL------------------------------------------ 280
            G +    H +Y   F+                                           
Sbjct: 532 GGVEHAILHLLYSRFFMQAITHKNDKFNITEPFKGLFTQGMVCHETYKDSENNWVSPDEI 591

Query: 281 --SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                    K   S    +   E +SKS  N IDP  +I   G D++R F++ +    KD
Sbjct: 592 ISKDGKKYLKNNPSQEVKVGPSESMSKSKKNTIDPENIINNYGADSVRLFILSDSPPEKD 651

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             + ++G+           +  L  + +  I KDY           ++ + ++   ++ +
Sbjct: 652 VQWSEEGIAASH--KFIQKLWTLHRKIIEEISKDYS---------EDASDELIKFTNKFI 700

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++I  N++N   +  +A +  + S +    +             + ST+L       +++
Sbjct: 701 KKISNNLENFSYNIIVANLHEMYSFL---INEI-------GKGYKKSTILDNY----KKI 746

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            I +   +P L+N+   I+   D+   + S D++
Sbjct: 747 LITMNPIIPHLSNECLKIIENTDKVE-WPSYDEK 779


>gi|224372863|ref|YP_002607235.1| valyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588843|gb|ACM92579.1| valyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 858

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 134/394 (34%), Gaps = 34/394 (8%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE-VYKGADGQYYNAQHNPVQW 159
                   + +     G  Y+        +  + +   +  +         + + +P QW
Sbjct: 321 EEKGFIEKIEEHTHQVGHCYRCKSIIEPYVSTQWFLKKEVAIPAIEAANRGDVKFHPKQW 380

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 + R           +  H   +   +      + V+   +      K F     
Sbjct: 381 KNNYDAWMRELRDWCISRQLWWGHQIPVYYCDECGHEWASVEEPTECPKCKSKNF----- 435

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH 271
              DP  ++  W  +     +T G+ +               +F+P +L + G DIL F 
Sbjct: 436 -HQDPD-VLDTWFSSALWPFSTLGWENGEWGKGEKWNPEDLERFYPNNLLITGFDILFFW 493

Query: 272 --AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
              +         ++P              G+K+SKS GNVIDP+E+IE+   DALR+ L
Sbjct: 494 VARMMMMGTHFLKDVPFRDVYLHALVRDEHGQKMSKSKGNVIDPLEMIEKYSADALRFTL 553

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                 G+D    +  L +  N    N + N  +R + M  + ++ +  T    T+  + 
Sbjct: 554 AILAVQGRDIKLSEAKLIESRN--FTNKLYN-AARFLKMHQEKFEDLENTE-IKTDLGKW 609

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTV 447
           +L   +   +++R  +     + A   +   +     D   +  K   + K +     ++
Sbjct: 610 MLYKLNEATKQVRRELDEYRFNDAAMTLYRFLWQDFCDWGIELSK---VSKDSISELGSI 666

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                   ++   LL  F+P +   ++  L   D
Sbjct: 667 Y-------KEAMKLLHPFMPFITEFLYQELSQTD 693



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++   I           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 28  SKKKNFCIVMPPPNVTGSLHIGHALTFTLQDIMVRYKRMDGYATLWQPGTDHAGIATQNV 87

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K F     ++  R +      S + F  T ++ 
Sbjct: 88  VEKQILAEGKTKEDLGREEFLKRVWEWKEFSGGTITKQLRHLGASPAWSRERF--TMDEG 145

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                R+ +KK+ ++G I KG Y   +  +D A  + +  Y    GQ  + ++
Sbjct: 146 LQRAVRVAFKKLYEEGLIVKGNYMVNWCPKDGALSDIEVEYDTHKGQLVHIKY 198


>gi|90408705|ref|ZP_01216854.1| valyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310187|gb|EAS38323.1| valyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 955

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 127/407 (31%), Gaps = 88/407 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++ R+            +     +P +  N + +   S ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVRVEPLAKTAREAVANGDIKFVPQQYEN-LYNSWMSDVQDWCISRQ-LW 430

Query: 216 WG--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYL 245
           WG  I    D                               ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDENGKVYVGHDEEQVRKEHNLDASIKLRQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K      D+ V G DI+ F         +           +P      +     
Sbjct: 491 EKTLDLKTFH-STDVLVTGFDIIFFWVARMIMMTMHFMKDEDGKPQVPFKTIYMTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNV+DP+++I+ +                                     
Sbjct: 550 ENGDKMSKSKGNVLDPLDMIDGIDLESLVKKRCGNMMQPQLAKKIEKQTRKAFADGIEPH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMI 377
           G DALR+ L    + G+D  +D   L+     +  N + N     +    +    ++   
Sbjct: 610 GTDALRFTLAAMASTGRDINWDMTRLEG--YRNFCNKLWNASRYVIMSCTEQPCGFNDDA 667

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
                 + +D  IL      +++ R  +       A   +   +       Y +  KP  
Sbjct: 668 NNEQQLSIADRWILGQLQTTIKDYRHALDTYRFDIAANILYEFIWHQFCGWYLELTKP-V 726

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           L K N        +  + V+  L  L    +P +  +I+  L +  E
Sbjct: 727 LFKGNVAEQRGTRHTLISVLETLLRLAHPIMPFMTEEIW--LRINKE 771



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 52/159 (32%), Gaps = 19/159 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESFCIMIPPPNVTGSLHMGHAFQDTIMDTIIRYQRMQGKNTLWQPGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                         + +++          L  S  +D    T +   
Sbjct: 90  VERKLFAETGQTRKELGRETFIDKIWEWKEESGGTICKQMRRLGTSVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +  + ++  + +   +Y+G     +  +     +D EV
Sbjct: 150 SEAVKKVFVDLYNDDLLYRGKRLVNWDPKLHTAISDLEV 188


>gi|118442963|ref|YP_879112.1| isoleucyl-tRNA synthetase [Clostridium novyi NT]
 gi|166980053|sp|A0Q3B0|SYI_CLONN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118133419|gb|ABK60463.1| isoleucyl-tRNA synthetase [Clostridium novyi NT]
          Length = 1038

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 66/414 (15%), Positives = 142/414 (34%), Gaps = 16/414 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGAD----GQYYNAQ 153
            ++   +    W+  +      K  +    +  RD+   N++++    D    G++    
Sbjct: 379 SEKFTHSYPHCWRCDTPLLYYPKDSWFVRMTSLRDKLLENNNKINWNPDNIRTGRFGKFL 438

Query: 154 HNPVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
            N + W       +   L  ++ +            L  +  N              +  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECECGHRECIGSIEELKEKGINVPDDIELHKPYIDGVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y         K +PA       D     
Sbjct: 499 TCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+++   +  L         +     +   G K+SKS GNV+DP +V++  G DA R+  
Sbjct: 558 FYSLLAISTALFDTNSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLQNEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDE 388
               A      + +D +K+     L+          +   L  ++        +    D+
Sbjct: 618 YTASAPWLPTRFSEDDVKETQRKFLSTLWNVYSFYVLYAELDQFNPLEYKDFVSENVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I  A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNTLIKTVEEDLDNYKITEAALELEDFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                   V+  +  +   FVP +A +I+  L V  +    +S+     P + L
Sbjct: 738 --YKTLYTVLTTIVKVAAPFVPFMAEEIYQNLVVNLDKDAIESVHLCTWPEYDL 789



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++DM++ L      D+   T    +
Sbjct: 96  IEKKLGISGKPQIEEYGVEKFVKECKDSVFKYTSLWKDMSEKLGFWVDMDNPYVTYHNTY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + +K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKTMWEKDLLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|160872646|ref|ZP_02062778.1| leucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121445|gb|EDP46783.1| leucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 834

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 7/273 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH    ++ DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGHLHVGHVRNYVLGDVIARYQRMLGKNVLHPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               ++   +   N  + R     L +S+D    I T    ++   +  + ++  KG +Y
Sbjct: 91  IEKKISPAKWTYSNISHMRKQFKQLGLSFDWSREITTCNPDYYRWEQWFFIQLYKKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +   D+    +++V  G            ++  E   +FF+++AY D+LL+  
Sbjct: 151 KKNASVNWDPIDKTVLANEQVIDG----RGWRSGALIERKEIPQWFFKITAYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALTNYL 239
           ++   +   ++           G+             IKI    P  +  V   AL+ + 
Sbjct: 207 DTLDAWPEQVKAMQRNWIGRSQGITLSLRVNCPELETIKIFTTRPDTLFGVTFIALSPHH 266

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA 272
                    +           HV   +    H 
Sbjct: 267 PLAHLAIQKNPKLQARIAEFQHVPTSEEATAHL 299



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 114/358 (31%), Gaps = 37/358 (10%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
              G   Q Y     P+ +    G           +L       +   P++   E    V
Sbjct: 418 HDWGVSRQRYWGTPIPIIYCSRCGEVPVPEEDLPVVLPETIQFNDRNSPLKNTPEFYQTV 477

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW-P 257
              L   S  R+T  +              ++++   Y               +AK+W P
Sbjct: 478 -CPLCKQSAHRETDTF------------DTFVESSWYYARFACPTQNRAMLDDRAKYWTP 524

Query: 258 ADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            D ++ G +    H +Y   F         L++N P   ++ + G +L  G K+SKS GN
Sbjct: 525 VDHYIGGIEHAVLHLLYARFFHKVLRDLGLLNSNEPFT-RLLTQGMVLKNGVKMSKSKGN 583

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            IDP ++I   G D LR F++      +   +   G++          +  L     S I
Sbjct: 584 TIDPTQLISHYGADTLRLFILFAAPPDQSLEWSDTGVEGAYR--FLKRLWALAHHCTSFI 641

Query: 370 LKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           ++  +                +   ++      +L   R + + Q  +  +A  + L + 
Sbjct: 642 IELNENHKHSLTPPIDWTKVPDEYRTLRRQIHEILHRARLDFERQQFNTVIACCMKLFNT 701

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                             D       +  + +  L  LL   VP + + ++  L    
Sbjct: 702 ----LQTTHHVLCSSIKEDTQLLFKQIIWQGLTILLRLLAPIVPHITHALWKELKFPG 755


>gi|305666031|ref|YP_003862318.1| isoleucyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710806|gb|EAR03038.1| isoleucyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 1133

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 103/280 (36%), Gaps = 10/280 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         K + +PAD    G D     F+ ++
Sbjct: 594 KPMKRESDLIDVWFDSGSMPYAQWHYPFENKNLIDKGETFPADFIAEGVDQTRGWFYTLH 653

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     V +   +  +G+K+SK LGN +DP E ++E G DA R++++    
Sbjct: 654 AIATMVFDSVAYKNVVSNGLVLDKEGKKMSKRLGNAVDPFETMDEHGPDATRWYMISNAN 713

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D DG+ +                ++   + ++             E D  ILS
Sbjct: 714 PWDNLKFDIDGIVEVKRKFFGTLYNTYSFFALYANIDEFSYAEDNIPLNERPEIDRWILS 773

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-TVLY 449
               +++++ E   +    RA   +   V E   + Y          K +  +   +   
Sbjct: 774 ELHTLIKKVDEAYDDYEPTRAARAISDYVQENLSNWYV-RLCRRRFWKGDYQKDKISAYQ 832

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                +  +A L     P   ++++  L        F+S+
Sbjct: 833 TLYTCLTTVAKLSAPIAPFFMDRLYRDLTNTTSKDKFESV 872



 Score = 50.5 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  I   
Sbjct: 36  EGNPSYVFYEGPPSANGMPGIHHVIARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPIELG 95

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + +M + +   +  +D   T + ++
Sbjct: 96  VEKELGITKEDIGVKISVEEYNAACKKAVMRYTDVWNEMTERVGYWVDMEDPYITYKSKY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            ++   L K+I DK  IYKG     YS +
Sbjct: 156 MESVWWLLKQIYDKDLIYKGYTIQPYSPK 184


>gi|260887853|ref|ZP_05899116.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838721|ref|YP_004413301.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862359|gb|EEX76859.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746485|gb|AEB99841.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 824

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + + Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 29  RTQPEYYVLEMFPYPSGNLHMGHVRNYSIGDVIARFKKMQGCNVLHPMGFDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  N +     + +SYD      T    ++   + L++    KG  
Sbjct: 89  AIKHGVKPADWTYSNIENMKRQQMSMGLSYDWSREAVTCRPEYYRWTQWLFELFYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +         +++V  G          + V   +   +F +++ Y D+LL+ 
Sbjct: 149 YKKEASVNWCDTCGTVLANEQVIDGK----CWRCDSEVHKKDLSQWFLKITDYADELLAD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++   E       GL
Sbjct: 205 LDKLKGWPERVKTMQENWIGRSEGL 229



 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 121/341 (35%), Gaps = 40/341 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + ++ G            L    +  +  +    ++E            
Sbjct: 429 QRYWGAPIPVIYCDKCGEQLVPEEELPVKLPEDVNFEQGTVSPLAQSESFVHCTCPQCGG 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y             K  +W P D ++ G +
Sbjct: 489 PARRET---------DTMDTFICSSWYYMRYTDPHNTHKPFAADKVNYWAPVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F         L  + P  + + + G ++  G K+SKS GNV+ P E+I+
Sbjct: 540 HAILHLLYSRFFTKVLRDEKLLDFDEPF-QNLLTQGMVIKDGAKMSKSKGNVVSPEEIIQ 598

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D  R F++      +D  +   G++        N +  +V+     I +  D    
Sbjct: 599 KYGADTARLFILFAAPVERDLEWSDQGVEGAFR--FLNRVWRIVAHFEDAIREGIDDY-- 654

Query: 379 TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
                T  ++S+     + ++++ E++ +  + + A++ V+ LV   + ++  Q+     
Sbjct: 655 DHSTLTAEEKSLRRTLHQTIKKVTEDVGERFMFNTAISAVMELV---NAFYAFQE----- 706

Query: 438 KTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
                   TV    V E+   L  +L  F P +  +++  +
Sbjct: 707 -------KTVHPGLVREISFALVKMLAPFAPHITEELWSRM 740


>gi|34495960|ref|NP_900175.1| leucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|48428526|sp|Q7P0R1|SYL_CHRVO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34101814|gb|AAQ58182.1| leucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 872

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y  +   YP+ + H+GH     I DVLARF RL G +VL   G D  G     AA
Sbjct: 31  SRPKYYALSMFPYPSGKLHMGHVRNYTITDVLARFKRLQGFNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    +   D L  + D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNGGAPAAWTYANIEYMKTQLDSLGFALDWERELATCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   Y+FR++ Y ++LL+  
Sbjct: 151 KKNGVVNWDPVDQTVLANEQVVDG----RGWRSGALVEKREIPMYYFRITDYAEQLLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DKLDGWPEQVKTMQRNWIGKSYG 229



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 22/195 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E IE+ G D  R F++      +   +   G++       A     
Sbjct: 631 EKMSKSKNNGVDPQEFIEKYGADTARLFMMFAAPPEQSLEWSDAGVEG------AFRFLK 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            + ++    ++         G    S + +       +Q++ ++  + Q  + A+A V+ 
Sbjct: 685 RLWKTAREHVEAGVVAPYASGELNASQKELRFKLHGTIQKVADDYGRRQQFNTAIAAVME 744

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++  D+            T+ D    V     EV+    +LL   VP + + I++ L  
Sbjct: 745 LLNAYDK----------ADTSGDIGRAV---AQEVLEAATLLLSPIVPHVCDGIWNALKP 791

Query: 480 ADE--NRCFQSLDQR 492
             E   + +  +D+ 
Sbjct: 792 GTELLAQAWPKVDEA 806


>gi|260588888|ref|ZP_05854801.1| isoleucine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540667|gb|EEX21236.1| isoleucine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 1047

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 130/405 (32%), Gaps = 14/405 (3%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
           +  +   +    W+  +      +  +    +   +    ++            G++ + 
Sbjct: 385 SAPKFEHSYPHCWRCDTPLIYYARESWFIKMTEVKDDLIRNNNTINWIPESIGKGRFGDW 444

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SL 209
             N   W      ++      ++ +    +       L     NE    V+     +  +
Sbjct: 445 LENVQDWGISRNRYWGTPLNVWECECGHQHSIGSRQELYEMSGNEAAKTVELHRPYIDEI 504

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
           +      G  +   P+ ++  W D+         Y         + +PAD      D   
Sbjct: 505 TITCPKCGKPMHRVPE-VIDCWFDSGAMPFAQHHYPFENKDLFEQQFPADFISEAVDQTR 563

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   + LL    P    +         G+K+SKS GN +DP E +E+ G DA+R+
Sbjct: 564 GWFYSLLAESTLLFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFEALEKYGADAIRW 623

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTE 385
           +     A      +    +++     +           +   + ++D    T        
Sbjct: 624 YFYVNSAPWLPNRFHGKAVQEGQRKFMGTLWNTYAFFVLYANIDEFDATKYTLEYDKLPV 683

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRA 444
            D+ +LS  + V++ + EN++N  I      +   V ++ + Y    +     K      
Sbjct: 684 MDKWLLSKLNTVVKAVDENLENYRIPETARALQEFVDDMSNWYVRRSRERFWAKGMEQDK 743

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                     +  ++      VP +   I+  L  + +    +S+
Sbjct: 744 INAYMTLYTALVTISKAAAPMVPFMTEDIYQNLVRSLDKNAPESI 788



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGKMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T +  +
Sbjct: 96  VEKLLGLDGKEQIEEYGLIPFIDKCKESVWKYKGMWEDFSSTVGFWADMDNPYVTYDDNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 199


>gi|325577894|ref|ZP_08148127.1| valine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160324|gb|EGC72451.1| valine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 968

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 138/417 (33%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 393 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 450

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 451 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 510

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 511 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 569

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 570 EQGQKMSKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 629

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 630 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSEGE 684

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 685 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 743

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      L +  ++   Q   Q
Sbjct: 744 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFLGITADSIMLQPFPQ 800



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 50  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 109

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 110 VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 167

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 168 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 224


>gi|258645206|ref|ZP_05732675.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402556|gb|EEW96103.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 829

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 84/229 (36%), Gaps = 7/229 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+     YP+   H+GH     I DV+ARF  + G +V+   G D  G     AA
Sbjct: 38  NKKKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARFKSMQGFNVIHPMGYDAFGMPAENAA 97

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N  N       L +SYD    + T  + ++   + L++    +G  Y
Sbjct: 98  IQHGIAPAEWTYANIENMTRQQKELGLSYDWEREVLTCREDYYKHTQNLFEIFYKRGLAY 157

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +         +++V +G          NPV       +F +++ Y D+LL+  
Sbjct: 158 KKEAKVNWCDHCHTVLANEQVEEGK----CWRCKNPVVKKNLSQWFLKITDYADRLLADL 213

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +  P +   ++           G           +  I +       +Y
Sbjct: 214 DHMPGWPERVKIMQRNWIGRSIG-TQFFFHVDGMEDTIPVYTTRVDTVY 261



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 105/285 (36%), Gaps = 32/285 (11%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           L               D              Y       +     K  +W P D ++ G 
Sbjct: 486 LHCKCPKCGADAVRETDTMDTFIDSSWYFLRYCDPHNEQEPFSKGKTDYWMPVDQYIGGI 545

Query: 266 DILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +    H +Y   F+       +         +   G +L  G K+SKS+GNV+ P E++ 
Sbjct: 546 EHAILHLLYSRFFMKVLQDEGMVDYPEPFTNLLCQGMVLKDGGKMSKSVGNVVSPEEIVG 605

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D  R F++      KD  +   G++              + R  +++ K  +    
Sbjct: 606 KYGADTARLFILFAAPPEKDLEWSDQGVEGS---------YRFLKRVWTIVGKYQELGKE 656

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             G  +  + ++     + + ++ E++      + A++ ++ LV+E+ R+          
Sbjct: 657 LKGMLSPDEVALRRRLHQSIAKVTEDLDGKFAFNTAISAIMELVNEMYRF---------- 706

Query: 438 KTNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               ++ ST+      E++R L ILL  FVP +  +++  +   +
Sbjct: 707 ---GEKHSTIEDSFAKELLRDLLILLAPFVPHITEELWQGIGAEE 748


>gi|261400089|ref|ZP_05986214.1| valine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269210316|gb|EEZ76771.1| valine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 945

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTIHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|83949881|ref|ZP_00958614.1| leucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837780|gb|EAP77076.1| leucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 860

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 28  EDRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  +G   K +   N    +     L +S D      T +  ++   + L+    +KG +
Sbjct: 88  AMASGGHPKDWTYGNIATMKKQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEKGLV 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  E   +FF++S Y  +LL  
Sbjct: 148 YRKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERRELTQWFFKISDYSQELLEA 203

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ++   +   +    E       GL+
Sbjct: 204 LDTLEHWPAKVRLMQENWIGRSRGLQ 229



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 116/375 (30%), Gaps = 70/375 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV--ISFV 200
            G   Q Y     PV   +  G            L    S  +   P++R       +  
Sbjct: 431 WGLSRQRYWGCPIPVVHCDSCGVVPEKKENLPVRLPDDVSFDQPGNPLDRHPTWRDCACP 490

Query: 201 KSGLKDLSLSRKTFD-----WGIKIPDDPQYIMYVWIDALTNYLTTTGY-----LDNPDG 250
           K G      +          W       P+      ++    ++    Y           
Sbjct: 491 KCGGAARRETDTMDTFVDSSWYFARFTAPRAETPTVMEEAEYWMNVDQYIGGIEHAILHL 550

Query: 251 SKAKFWPADLHVIG----KDILRFHAIYWPAFLLSANL--------------PLPKKV-- 290
             ++F+   + + G    K I  F+A++    +  A                  P +V  
Sbjct: 551 LYSRFFARAMQICGHLPEKSIEPFNALFTQGMVTHAIYENAERRADNGRPLYHYPDEVEE 610

Query: 291 ---------FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                          +    K+SKS  NV+DP+ +I+  G D  R+F++ +    +D  +
Sbjct: 611 RDGAVVVKETGEAVTVIPSAKMSKSKNNVVDPVSIIDAYGADTARWFVLSDSPPERDVEW 670

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
              G +          + NL  R   M               +++D+ +L    + + ++
Sbjct: 671 TAAGAEAAFKH--LTRVWNLSERIAEM----------EDAPESDADKELLREMHKAIHDV 718

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              +++   + A+A++ +  +             L K+    A        + IR LA L
Sbjct: 719 TMGVESFGFNAAIAKLYAFTN------------TLSKSKAGAA-----TQRQAIRTLAQL 761

Query: 462 LQAFVPKLANKIFDI 476
           +    P LA  ++  
Sbjct: 762 MSPMTPHLAEDVWAR 776


>gi|254459363|ref|ZP_05072784.1| valyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083976|gb|EDZ61267.1| valyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 873

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 83/464 (17%), Positives = 155/464 (33%), Gaps = 72/464 (15%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           + G  + K              ++   F  + D   I  D       +      R+  + 
Sbjct: 266 DFGTGVVKVTPAHDQNDYEVGKRHDLEFITIFDEKGILNDY-----AEEFKGLERMEARD 320

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           I  K               +E +    E +K   G  Y    N V+      +F R    
Sbjct: 321 IIVKRL------------DEEGFIVKIEDHKHQVGHCYR-CKNIVEPYISRQWFVRKEV- 366

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY-- 226
            DK +    +      P    N   +     L+D  +SR+   WG +I     DD  +  
Sbjct: 367 ADKSIEKTNAGEAKFFPPHWIN-SYNSWMGDLRDWCISRQ-LWWGHQIPVFYCDDCDHEF 424

Query: 227 -----------------------IMYVWIDALTNYLTTTGYLD--------NPDGSKAKF 255
                                  ++  W  +     +T G+ +                F
Sbjct: 425 ASQEERPEACPKCASKNLTQDPDVLDTWFSSALWPFSTLGWGNGDSEMDKLFQSDDMKDF 484

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  L + G DIL F    +       +  LP             KGEK+SKS GNVIDP
Sbjct: 485 YPNTLLITGFDILFFWVARMMMMGENFNGKLPFNHIYLHALVRDEKGEKMSKSKGNVIDP 544

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++++ +   D LR+ L    A G+D    ++ L+  +N +  N + N  ++ + M +  +
Sbjct: 545 LDMVNKYSADILRFTLAISAAQGRDIRMSQEKLE--LNRNFTNKLYN-ATKYLQMNVDTF 601

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             +       T     ++S  +   +E+R  +     + A   +   +       +    
Sbjct: 602 PDIKGFCIETTLG-RYMVSRLNLATKEVRAALDEYKFNDAATVMYRFLW------NEFCD 654

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           W ++ +  D+ S V      + ++   LL  F+P +   ++  L
Sbjct: 655 WGIELSKADKGSIVE--LGAIFKEAMKLLHPFMPFITEYLYHEL 696



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 70/171 (40%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I         + HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 34  EEGKNFSIMMPPPNVTGRLHIGHALTFTLQDIITRYKRMDGYKTLWQPGTDHAGIATQNV 93

Query: 62  AQN---AGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +    A  TTK              + ++++    D    + +  +++    T +    
Sbjct: 94  VEKQLLAEGTTKEELGREKFLERAWAWKEESAGIMTDQLRKMGVTPAWERERFTMDAGLQ 153

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + +  +  + ++G I +G Y   +   D A  + +  ++  DG++Y+ ++
Sbjct: 154 KSVKEAFVHLYNEGLIIRGNYMVNWCTHDGALSDIEVEHEDHDGKFYHIKY 204


>gi|187777309|ref|ZP_02993782.1| hypothetical protein CLOSPO_00861 [Clostridium sporogenes ATCC
           15579]
 gi|187774237|gb|EDU38039.1| hypothetical protein CLOSPO_00861 [Clostridium sporogenes ATCC
           15579]
          Length = 1038

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 140/410 (34%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ ++   D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTIHWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++ +            L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECECGHRECIGSIKELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV++P +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGVKMSKSKGNVVEPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYVLYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                   V+  +  +   FVP +  +++  L V       +S+     P
Sbjct: 738 --YTTLYRVLTTVIKVAAPFVPFVTEEMYQNLVVNLNKDAKESIHLCKWP 785



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEHFTFYDGPPTANGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      D+   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEKLGFWVDMDNPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|116254456|ref|YP_770294.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384448|sp|Q1MA25|SYL2_RHIL3 RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|115259104|emb|CAK10215.1| putative leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 876

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIGSMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLTIRW 235



 Score = 97.2 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 75/386 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G      A     L    +  +   P++R          
Sbjct: 434 WGISRQRYWGCPIPVIHCDDCGVVPVPKADLPVKLPDDVTFDQPGNPLDRHPTW------ 487

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                 +S        +   D            T +            +  ++ P D ++
Sbjct: 488 ----RHVSCPNCGKDARRETDTMDTFVDSSWYFTRFTAPWEDKPTDPEAANRWLPVDQYI 543

Query: 263 IGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKG--------------- 300
            G +    H +Y              A     K +F+ G ++H+                
Sbjct: 544 GGIEHAILHLLYSRFFTRAMRETGHVAATEPFKGLFTQGMVVHETYSRGAGASREWVAPA 603

Query: 301 ---------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                      EK+SKS  NV+DP ++I   G D  R+F++ + 
Sbjct: 604 DIRIDELDGKRRAFLLTNNEEVSIGSIEKMSKSKKNVVDPDDIIASYGADTARFFVLSDS 663

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  + + G++       A+     + R +S        + P P    E+  SI   
Sbjct: 664 PPERDVIWSEAGVEG------AHRFTQRLWRLISEAADALSAVAPAPATDGEA-LSISQA 716

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTV 452
             + L+ ++ +      ++A+A++  LV+ +        P  ++     D  +T      
Sbjct: 717 AHKTLKAVQNDYDKLWFNKAVARIYELVNAL------AAPMTKVAAGEGD--ATYRAAVR 768

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           +    L  L+    P LA + +  L 
Sbjct: 769 DAAEILIQLVSPMTPHLAEECWAALG 794


>gi|110640042|ref|YP_680252.1| isoleucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966463|sp|Q11NV4|SYI_CYTH3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110282723|gb|ABG60909.1| Isoleucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 1110

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 103/271 (38%), Gaps = 10/271 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+         Y           +PAD    G D     F  ++  + +L   +
Sbjct: 581 LIDVWFDSGAMPYAQWHYPFENKELFNNNYPADFIAEGVDQTRGWFFTLHAISGMLYDKV 640

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                + +   +   G K+SK +GNV++P E I++ G DA R++++       +  ++ D
Sbjct: 641 AFKNVIANGLVLDKNGNKMSKRVGNVVNPFETIDKYGPDATRWYMITNAPPWDNLKFNLD 700

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
           G+ +                ++   L ++            TESD  ILS    +++++ 
Sbjct: 701 GITEVQRRFFGTLQNTYSFFALYANLDNFTFAEAEIPLAQRTESDRWILSKLQSLVKDVA 760

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +   +    +A   +   V     + Y   + ++ W+  + N D+ +         +  +
Sbjct: 761 DAYSDYEPTKAGRAIQDFVVDDLSNWYVRLNRKRFWK-GEYNADKTAA-YQTLYTCLETV 818

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
           A L     P   +K+F  L    +    +S+
Sbjct: 819 AKLGAPIAPFYMDKLFSDLNQVSKKNAVESV 849



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     + D+  RF  + G  V    G D HG  +   
Sbjct: 35  EGNPTFTFYEGPPSANGTPGIHHVMGRTVKDIFCRFKTMQGFQVKRKGGWDTHGLPVELQ 94

Query: 62  AQNAGVTTKV------FVDQNSRNFRDMADVLDISYDD 93
            +     TK        V+Q ++  R+        +D+
Sbjct: 95  VEKELGITKEDIGKKITVEQYNQKCREAVMKYKSQWDE 132


>gi|288871216|ref|ZP_06116775.2| isoleucine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288864354|gb|EFC96652.1| isoleucine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 1051

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/404 (12%), Positives = 126/404 (31%), Gaps = 13/404 (3%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNA 152
           +      +    W+  +      +  +    S   E    ++            G++ + 
Sbjct: 391 SAPYFEHSYPHCWRCDTPLIYYARESWFIKMSAVKENLIKNNNTINWVPENIGKGRFGDW 450

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ K            L     N   +         S++
Sbjct: 451 LENVQDWGISRNRYWGTPLNIWECKCGHQQAIGSIDELKSLSSNCPENIELHRPFLDSVT 510

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G ++   P+ ++  W D+         Y           +PAD    G D    
Sbjct: 511 IICPKCGKEMYRVPE-VIDCWFDSGAMPFAQHHYPFENKELFETQFPADFICEGVDQTRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + L+    P    +     +   G+K+SKS GN +DP +V++  G DA+R++
Sbjct: 570 WFYSLLAISTLIFNKAPFKNVIVIGHVLDENGQKMSKSKGNSVDPFDVLKIYGADAVRWY 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTES 386
                A      +    + +     +           +   + +++           +  
Sbjct: 630 FYINSAPWLPNRFHDKAVTEYQRKFMGTLWNTYAFFVLYGNIDNFNPAEYCLEYDNLSVM 689

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  + V++ +   ++   +  A   +   V ++ + Y    +     K       
Sbjct: 690 DKWLLSKLNTVVKAVDTYLETYKVTEAARTLQDFVDDMSNWYVRRSRNRFWAKGMEQDKI 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  +  ++   +P +A  I+  L    +    +S+
Sbjct: 750 NAYMTLYSALITICKVIAPMLPFMAEDIYQNLVRNVDKTMPESV 793



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +  D++ R+  + G  V    G D HG  +    +         
Sbjct: 54  PPTANGKPHIGHVLARVFKDMVPRYRAMKGNMVPRKAGWDTHGLPVELEVEKNLGLDGKE 113

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    + D +D++      ++   T      ++     K+I
Sbjct: 114 QIETYGLEPFIAHCKESVWKYKGMWEDFSDIVGFWADMENPYVTYHNGFIESEWWALKQI 173

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +YKG     Y  R     +  EV +G  
Sbjct: 174 WDKDLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 206


>gi|331083422|ref|ZP_08332534.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330404115|gb|EGG83663.1| isoleucyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 1047

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 113/331 (34%), Gaps = 7/331 (2%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SLSRKTFDWGIKIPDD 223
           +   L+ ++ +    +       L     NE    V+     +  ++      G  +   
Sbjct: 459 WGTPLNVWECECGHQHSIGSRQELYEMSGNEAAKTVELHRPYIDEITITCPKCGKPMHRV 518

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           P+ ++  W D+         Y         + +PAD      D     F+++   + LL 
Sbjct: 519 PE-VIDCWFDSGAMPFAQHHYPFENKDLFEQQFPADFISEAVDQTRGWFYSLLAESTLLF 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P    +         G+K+SKS GN +DP E +E+ G DA+R++     A      +
Sbjct: 578 NKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFEALEKYGADAIRWYFYVNSAPWLPNRF 637

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
               +++     +           +   + ++D    T         D+ +LS  + V++
Sbjct: 638 HGKAVQEGQRKFMGTLWNTYAFFVLYANIDEFDATKYTLEYDKLPVMDKWLLSKLNTVVK 697

Query: 400 EIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + EN++N  I      +   V ++ + Y    +     K                +  +
Sbjct: 698 AVDENLENYRIPETARALQEFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTI 757

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +      VP +   I+  L  + +    +S+
Sbjct: 758 SKAAAPMVPFMTEDIYQNLVRSLDKNAPESI 788



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGKMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T +  +
Sbjct: 96  VEKLLGLDGKEQIEEYGLIPFIDKCKESVWKYKGMWEDFSSTVGFWADMDNPYVTYDDNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 199


>gi|154151808|ref|YP_001405426.1| isoleucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166229748|sp|A7IAM2|SYI_METB6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154000360|gb|ABS56783.1| isoleucyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 1076

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 140/408 (34%), Gaps = 70/408 (17%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ +     +F + S  +D +LS          P    +          +D  
Sbjct: 392 HCWRCKTPIIFRATSQWFLKASEMRDLMLSEV--KKVTWYPEWAGSARFYDWIKEARDWC 449

Query: 209 LSRKTFDWGIKIP---------------------------DDP----------------- 224
           +SR+   WGI IP                            DP                 
Sbjct: 450 VSRQR-YWGIPIPVWICDKCDKYRVIGTIAELEKASGQKVPDPHRPFVDQVTIPCECGGT 508

Query: 225 ----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I  VW D+      T G+    D    K WPAD    G+D     F++    + 
Sbjct: 509 MKRVGDIFDVWFDSAVASWATVGFPAKTD-EFEKLWPADFITEGQDQTRGWFYSQLGAST 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P          +  +G K+SKSLGNV+ P EVI +VGVD LR +++   A   D
Sbjct: 568 IAFGKAPYKSVCMHGFALDAEGRKMSKSLGNVVAPEEVIAKVGVDVLRLYVLSSSAPWDD 627

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPG-----------AFTES 386
             ++ DG+         N + N+    +  MIL  ++    +                + 
Sbjct: 628 LKFNWDGIATVNRT--MNILWNVYRFPMPYMILDRFEPEAKSGHWDGSFVRSHIRELPDE 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D  I+S  + V   +  + +   +HRA  ++++ +       Y    +P    +   ++ 
Sbjct: 686 DRWIVSRINTVAGIVDASTKECQLHRATREILNFILEDLSRWYVQLVRPRMWLEGESEQK 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                    V+R+L  L+  F P +  +I+  L   ++      LD +
Sbjct: 746 IFAYETIYYVMRRLVDLMAPFAPHITEEIYSNLRCKNDPGSVHMLDWQ 793



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 19/183 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
            +      Y   Q H+G A+  II D + R+HR++G +V+   G D HG  I    +   
Sbjct: 40  FFFVDGPPYTTGQIHLGTAWNKIIKDSILRYHRMNGRNVIDRAGYDMHGLPIEVKVEQKL 99

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                               + F  +N        + L I   + +  +T +  + +   
Sbjct: 100 GFASKKDIETFGIEKFINECREFAIKNKELMDAQFENLGIWMDFKNAYQTIKPWYVEAAW 159

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K  +KG + +G     +  R E    D EV    +         P++    E    
Sbjct: 160 WTLAKAQEKGMLERGYRVVNWCPRCETAIADAEVEYWDETDPSVFVKFPIRGKVSESLVI 219

Query: 168 RLS 170
             +
Sbjct: 220 WTT 222


>gi|319427210|gb|ADV55284.1| valyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 958

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEADVRAKHNISDSMTLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NVEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPE 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 YKGGELELSLADRWIIGLFNQTVKTFDDHMAAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  +  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGSEAQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|322513322|ref|ZP_08066443.1| valine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120921|gb|EFX92773.1| valine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 954

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 130/397 (32%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLKKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            N  +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPIMPFITEEIWQ 766



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|148260778|ref|YP_001234905.1| valyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146402459|gb|ABQ30986.1| valyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 891

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 127/360 (35%), Gaps = 44/360 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  E +F          +   E      +P    N   ++++  ++   +SR+   W
Sbjct: 363 IEPLLTEQWFCNAEVLAGPAIEAVEDGRVQFVPKSWENTYFAWMR-NIEPWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 421 GHRIPAWYAPDGTVFVAETEEAALAEAAEHFGHTVALRQDDDVLDTWFSSALWPFSTLGW 480

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +N      +++P D+ V G DI+ F    +         ++P    + +      +G+K
Sbjct: 481 PENTP-ELDRYYPGDVLVTGFDIIFFWVARMIMMGMYAMGDVPFRTVMINGLVRDERGQK 539

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+ GNVIDP+ +I++ G DALRY ++ +   G++     + ++   N      + N  
Sbjct: 540 MSKTKGNVIDPLALIDQFGADALRYTVIAQSGAGRNIKLGPNMVEA--NRSFVTKLWN-A 596

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M     D       A       IL   +R + E  E ++   +            
Sbjct: 597 ARFCEMNQCRPDPAFRPETAALPLSRWILDAANRAVLEATEALEGFRLADYAQACYRFTW 656

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D + +  KP  L   + D A  +  V   V+  L  LL   +P +   ++D     
Sbjct: 657 GDFCDWFLELAKP-GLAGED-DAARELRAVAAHVLGLLLRLLHPVIPFVTEALWDEFGYG 714



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 24/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN     H+GHA  M + DVL R HR++G D L+  GTD  G      + +  Q
Sbjct: 37  TIMIPPPNVTGSLHVGHALTMTLQDVLIRHHRMNGRDALWQPGTDHAGIATQLMVERELQ 96

Query: 64  NAGVTTKV----------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G + +           +  +       +R  R +    D S + F  T ++      R
Sbjct: 97  REGTSRQEIGRDAFLDRVWTWKAEQGGNITRQLRRLGASPDWSRERF--TMDEGLSKAVR 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++ + G IY+      +     +  +D EV              PV+
Sbjct: 155 TIFVRLFNDGLIYRAKRLVNWDPVFRSAISDLEVEMREVKGNLWHLRYPVE 205


>gi|238026215|ref|YP_002910446.1| leucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875409|gb|ACR27742.1| Leucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 864

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T    ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIAYMKRQMQAMGLAIDWSREIATCNPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL  
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITQYADELLDD 205

Query: 180 YESHPEFILPIERRNEVI 197
            E           +   I
Sbjct: 206 LEGLGWPERVKVMQQNWI 223



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 95/307 (30%), Gaps = 38/307 (12%)

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 HWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETFY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  F PAD+ V   D  R       A   +   P+         +L   EK+S
Sbjct: 580 REDATGKKTWFNPADVTVTHDDKGRP----VGAVHNADGQPV---------VLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++                R
Sbjct: 627 KSKNNGVDPQVLIDQHGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWAFGAAHR 686

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
               +   +D      GA      ++      VL++   + Q    +  ++  + +++  
Sbjct: 687 EALAVRAGFDAAQLDEGA-----RALRREIHGVLRQADFDYQRLQYNTVVSAAMKMLNA- 740

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                               +    V  E    L  +L   VP +   ++  L  ADE  
Sbjct: 741 ---------------IEAAKAAPAGVLRETYGILLRVLYPVVPHITFALWQALGYADEFG 785

Query: 485 CFQSLDQ 491
                  
Sbjct: 786 TLLDAPW 792


>gi|307246417|ref|ZP_07528491.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307255402|ref|ZP_07537210.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259852|ref|ZP_07541568.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306852668|gb|EFM84899.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306861631|gb|EFM93617.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866075|gb|EFM97947.1| Valyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 948

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 130/397 (32%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEAGNVYVARNEEEVRSKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 ENGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 610 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   R+ +       A   +         D Y +  KP     
Sbjct: 665 VEYSLADRWIESAFNRTVGTFRDALSQYRFDLAANAIYDFTWNEFCDWYLELTKP-VFAN 723

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +        V V+ +L  L    +P +  +I+ 
Sbjct: 724 GTEAQKRGASQTLVRVLEKLLRLAHPIMPFITEEIWQ 760



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|209551495|ref|YP_002283412.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238064870|sp|B5ZV40|SYL_RHILW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209537251|gb|ACI57186.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 876

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIGSMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLTIRW 235



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 112/344 (32%), Gaps = 37/344 (10%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERRNE 195
               V     G+    + + +    +  ++F       +            LP  +    
Sbjct: 486 TWRHVSCPTCGKDARRETDTMDTFVDSSWYFTRFTAPWEAKPTDPEAANRWLPVDQYIGG 545

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           +   +   L     +R   + G     +P   ++         +    Y     GS+   
Sbjct: 546 IEHAILHLLYSRFFTRAMRETGHVAATEPFKGLFTQ-----GMVVHETYSRGAGGSREWV 600

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            PAD+ +   D  R   +      ++                   EK+SKS  NV+DP +
Sbjct: 601 APADIRIEEIDGKRRALLLTTGEEIAIG---------------SIEKMSKSKKNVVDPDD 645

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I   G D  R+F++ +    +D  + + G++       A+     + R +S        
Sbjct: 646 IIASYGADTARFFVLSDSPPERDVIWSEAGVEG------AHRFTQRLWRLISEAADALSA 699

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW- 434
           + P P    E+  SI     R L+ +  +      ++A+A++  LV+ +        P  
Sbjct: 700 VAPAPATEGEA-LSISQAAHRTLKAVENDYDKLWFNKAVARIYELVNAL------AAPMT 752

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +     D  +T           L  L+    P LA + +  L 
Sbjct: 753 RVAAGEGD--ATYRAAVRNAAEILIQLVAPMTPHLAEECWMALG 794


>gi|331015239|gb|EGH95295.1| valyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 948

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 122/403 (30%), Gaps = 89/403 (22%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         L           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTLHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VL 719

Query: 437 KKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +R        V V+     L   F+P +  +I+  L
Sbjct: 720 WDETASIERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|329113640|ref|ZP_08242418.1| Leucyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697047|gb|EGE48710.1| Leucyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 872

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 7/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 39  NKPKYYVLEMFPYPSGQLHMGHVRNYALGDVIARYKRARGFSVLHPMGWDAFGLPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  GV  K +   N    R     L  S  +D  I T    ++   + L+      G + 
Sbjct: 99  RERGVHPKEWTLNNIATMRGTLQRLGFSLNWDREIATCLPNYYGKQQKLFLDFLKSGLVE 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G           P++  +   +F +++ + + LL+  
Sbjct: 159 RRESWVNWDPIDQTVLANEQVVDGKG----WRSGAPIEKKQLSQWFLKITDFAEDLLNGL 214

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++   +   +    E       G   L  S      G+    +   +     D L  
Sbjct: 215 KTLDRWPERVRTMQERWIGRSEG-AKLRFSLHQPPAGLDENLNAVEVFTTRPDTLFG 270



 Score = 90.2 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 121/360 (33%), Gaps = 49/360 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV+  ++  +    +         + S P+   P  R  +           +  S     
Sbjct: 468 PVELPDDVSFDKPGNPLDHHPTWKHTSCPKCGKPATRETDTFDTF------VDSSWYFAR 521

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK-DILRFHAIY 274
           +       P            +               A+F+   +H  G  D+    A  
Sbjct: 522 FTAPHAPTPTVRAAADGWLPVDQYIGGIEHAILHLLYARFFTRAMHRTGHLDVDEPFAGL 581

Query: 275 WPAFLLS--------ANLPLPKKV-----------FSHGFILHKGEKISKSLGNVIDPIE 315
           +   ++S         N   P++V            +    + + EK+SKS  N + P+ 
Sbjct: 582 FTQGMVSHESYKDSSGNWLYPEEVERTAQGCVKRGTTEPVTVGRVEKMSKSKRNTVAPVA 641

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE  G D  R+F++ +    +D  + + G+        A      + R++  + +D   
Sbjct: 642 IIERFGADTARWFVLSDSPPERDMEWTEAGVAG------AARFNQRLFRTIRTVAQDIPA 695

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
               P       +++     R +  + E ++   I+ A+A++  L S +           
Sbjct: 696 TTECPTDIDRQADTLRRTTHRTIAAVTEALEGFAINVAVARIHELTSAL----------- 744

Query: 436 LKKTNPDRASTVLYVTV---EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                 ++++TV  +     E  + L +L    +P LA ++F ++  +      QS  + 
Sbjct: 745 ---AEAEKSATVSGMAFARREAAQTLCLLCAPMMPHLAEEMFALIMPSAGLAAQQSWPEA 801


>gi|213968388|ref|ZP_03396532.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384653|ref|ZP_07233071.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302059577|ref|ZP_07251118.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302133007|ref|ZP_07258997.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213927026|gb|EEB60577.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 948

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 122/403 (30%), Gaps = 89/403 (22%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         L           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTLHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VL 719

Query: 437 KKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +R        V V+     L   F+P +  +I+  L
Sbjct: 720 WDETASIERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|114586471|ref|XP_001147597.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 830

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIKGMQAHWIGDC 276



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 105/318 (33%), Gaps = 69/318 (21%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          + + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDHKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 622 SVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   +  +++         + V+ +
Sbjct: 680 -VKTDALPGVLRWQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE---VIR 456
           +  +  ++  ++ A++Q++ L + + +                 + +V+  + E    + 
Sbjct: 739 VTTHFTEDFSLNSAISQLMGLSNALSQ----------------ASQSVILHSPEFEDALC 782

Query: 457 QLAILLQAFVPKLANKIF 474
            L ++     P + ++I+
Sbjct: 783 ALMVMAAPMAPHVTSEIW 800


>gi|83771678|dbj|BAE61808.1| unnamed protein product [Aspergillus oryzae]
          Length = 988

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     A
Sbjct: 80  TEKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENA 139

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N    ++    +  S+  D  + T     ++  + ++  +  KG  
Sbjct: 140 AIERGIDPAEWTKDNIARMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYKKGLA 199

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+ +  + +FFR++ +++ LL+ 
Sbjct: 200 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFRITDFKEALLND 256

Query: 180 Y 180
            
Sbjct: 257 L 257



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 55/450 (12%), Positives = 121/450 (26%), Gaps = 101/450 (22%)

Query: 113 ISDKGDIYKGCYSGWYSLRD---EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
               GD+    + G+ + R    +  ++ +   +  +        + V+      +    
Sbjct: 438 HLPAGDMKAYTHEGFLNSRCWKYQGLHSREAGQQIINDLRAVGHGDTVEQWRLRDWLISR 497

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL--------KDLSLSRKTFDWGIKIP 221
             Y    +          +P+      +   K             L  S +  +      
Sbjct: 498 QRYWGTPIPIIHCGDCGPVPVPDDQLPVKLPKIEGDWLKGKRGNPLESSDEWVNTECPRC 557

Query: 222 DDPQY----IMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             P       M  ++D  + Y              S +   P D+++ G +    H +Y 
Sbjct: 558 QGPAKRDTDTMDTFVD-SSWYFLRFLDSANRRQPFSPSSARPVDVYIGGVEHAILHLLYA 616

Query: 275 ------------WPAFLLSAN----LPLPKKVFSHGFI---------------------- 296
                       +P      +    L   K + S G +                      
Sbjct: 617 RFIYKFLAKSGLFPEIAHVGDVSRPLEPFKTLLSQGMVHGKTYSEPSTGRFLHPSEMDLS 676

Query: 297 --------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                             EK+SKS  N +DP     + G DA R  ++      +   +D
Sbjct: 677 SPDKPVIKGTQITPNVSFEKMSKSKHNGVDPTACALKYGADATRAHVLFSAPVSEVLEWD 736

Query: 343 KDGL--KKRVNADLANGIGNLVSRSVS----------MILKDYDGMIPTPGAFTESDESI 390
           +  +   +R    +   + +      S          M+      +  +P   + +D   
Sbjct: 737 ETKIVGVERWFGRVWKLVQDAQQTLASSSYTFNPDELMLSNHATALPYSPQNLSGNDADA 796

Query: 391 LSVCSRVLQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +    R +  +   ++N    ++  ++ +  L +                       +  
Sbjct: 797 VLFTHRTILSVTSCIENNPYGLNTVISDLTKLTNS----------------LTSSTPSSP 840

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V    I  L  LL    P LA++ ++ L 
Sbjct: 841 QVLYLCISSLLRLLAPIAPALASESWETLN 870


>gi|298293749|ref|YP_003695688.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930260|gb|ADH91069.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 870

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH    ++ DV+ARF R+ G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHGRNYVMGDVVARFKRMKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 + +  +N    R+   +L +S D    I T +  ++   + ++ +    G +Y+
Sbjct: 93  ERKSHPREWTYENIATMREQLKLLGLSLDWSREIATCDPSYYGEQQRIFLEFLKGGFVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  +   +FFR++A   +LL   +
Sbjct: 153 RESEVNWDPVDNTVLANEQVIDG----RGWRSGALVERRKLAQWFFRITALAQELLDGLD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +            GL   
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGLHVR 234



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P  V +  GVD  R+F++ +    +D  +   G++       A     
Sbjct: 623 EKMSKSKKNVVPPEIVADTFGVDCARWFMLADTPPERDSEWTSAGIEG------AWRFVQ 676

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R V          I  P +F     ++     ++  ++ ++++    + A+A+V + 
Sbjct: 677 RIWRLVGEAAALAPADIARPESFGAESTTLRRATHKLAAQVADDVERLRFNVAVARVHAF 736

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL----QAFVPKLANKIFDI 476
               + + D         T   +A  V       +R+ A  L       VP LA + + +
Sbjct: 737 ---ANVFGDVL-------TTARKAGDVPADLAFALREAAHFLVATVSPMVPHLAEECWTV 786

Query: 477 LF 478
           L 
Sbjct: 787 LG 788


>gi|39938504|ref|NP_950270.1| valyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39721613|dbj|BAD04103.1| valyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 680

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 148/387 (38%), Gaps = 34/387 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D +        +L+ + ++   E +    G Y +     ++      +  +  A  
Sbjct: 117 YQGLDRFVCRQKLVQTLKQKGFFTKTENHLHKVG-YSSISDAIIEPRLSLQWVLKTKAIA 175

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              L   + +        R   + +     ++D  +SR+   WG +IP            
Sbjct: 176 QIALKTNKINFF----PLRFENIFNNWLQNIEDWCISRQ-LWWGHQIPAWHKGQEIKVQI 230

Query: 222 --DDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA-- 272
               P++     ++  W  +     +T G+ +         +P D+ V G DIL F    
Sbjct: 231 ESPGPEWSLDCDVLDTWFSSALWPFSTLGWPNCNAPLFQNRFPTDVLVTGYDILTFWVSK 290

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + + + LL+   P    +       +KG+K+SKS GN +DP+EV+ + G DALR+FL   
Sbjct: 291 MVFQSILLTHKDPFKDVLLHGLVRDNKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTN 350

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G D FYD+  +    N    N + N +SR V +     D         T + +++L+
Sbjct: 351 AAPGFDLFYDETKVASSWN--FINKLWN-ISRFVKLNTSTLDTDF-DINLLTLTQKALLT 406

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
                 Q++    Q   +      +   V E   + + +  K   +   +N         
Sbjct: 407 QLHLTTQKVTTLYQKYELKEIGKILYHFVWEDFANWHLEFAKHDLDQNNSNLTNLHNSQK 466

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
             V +++ +  LL  F+P + + +++ 
Sbjct: 467 FLVYMMKHILQLLHPFIPFVTDALYEN 493


>gi|307610052|emb|CBW99587.1| leucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 823

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F ++++Y D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITSYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++          G
Sbjct: 207 DSLDEWPAQVKQMQRNWIGKSIG 229



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 63/444 (14%), Positives = 133/444 (29%), Gaps = 45/444 (10%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     + +   + I +D       +         +  +
Sbjct: 330 YGSGAVMAVPAHDQRDWEFAQKYQLPVKQVIKPIGIEHDFNQSAYTEEGILINSNQFDNL 389

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                I         +   +A  N      G   Q Y     P+   E+ G         
Sbjct: 390 LSSKAIQVITNFLEENDAGKATINYRLRDWGVSRQRYWGTPIPMIICEQCGIVPVPDEEL 449

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +L           P+ +  E ++                  G     +       +++
Sbjct: 450 PVVLPENVDFTGTGSPLTQCKEFVNV------------TCPKCGQDATRETD-TFDTFVE 496

Query: 234 ALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSA 282
           +   Y         +     +AK+W P D ++ G +    H +Y   F         +++
Sbjct: 497 SSWYYARFACKGQENAMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNS 556

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  K + + G +L  G K+SKSLGNV+DP  +I   G D  R F++      +   + 
Sbjct: 557 DEPF-KALLTQGMVLKDGHKMSKSLGNVVDPNHLINTYGADTARLFVMFASPPEQSLEWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGAFTESDESILSVCSRV 397
             G++          +     +   M++   D +                +    +  ++
Sbjct: 616 DSGVEGAHR--FLKRVWAFSHQHRDMLIDINDSILSGNGHVDWKEAESRLKKSRHIVHQI 673

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L +   +      +  ++  + L +E+  Y          +T  D+     +     I  
Sbjct: 674 LAQATHDYDRNQFNTVVSGCMKLFNEISDY--------SIETENDK-----FFIHSSISI 720

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  LL    P + + ++  L    
Sbjct: 721 LLRLLAPITPHICHCLWQQLGFDK 744


>gi|240013321|ref|ZP_04720234.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120392|ref|ZP_04733354.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 876

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G     ++  + +         ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 747 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|224824915|ref|ZP_03698021.1| valyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224602586|gb|EEG08763.1| valyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 938

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 118/369 (31%), Gaps = 77/369 (20%)

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY-------- 226
           +   ES     +P    N   +   + ++D  +SR+   WG  I    D           
Sbjct: 397 IDAVESGQVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGQVYVGRSL 454

Query: 227 -----------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
                            ++  W  +     +T G+ ++    +A   P+ + V G +I+ 
Sbjct: 455 EEAQAKAPGKTLRRDDDVLDTWFSSALVPFSTLGWPEDTPELRAFV-PSQVLVTGYEIIF 513

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI---------- 317
           F    +          +P            H+G+K+SKS GNVIDP+++I          
Sbjct: 514 FWVARMIMMTTHFCGKVPFKDVYIHGMVRDHEGKKMSKSEGNVIDPVDLIDGIALQPLIE 573

Query: 318 ---------------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                                         G DALR+ +      G+   +D        
Sbjct: 574 KRTTGLRRPEKAPAIAKATEKLFPEGIPPFGSDALRFTMASYATLGRSVNFDFKR--AEG 631

Query: 351 NADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             +  N + N  +R V M +  KD       P  ++  D+ I+    +   ++   ++  
Sbjct: 632 YRNFCNKLWN-ATRFVMMNVEGKDCGQDESLPLEYSFVDQWIIGRLQQAEADVTNALETY 690

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               A   +   +     D Y +  K  +L+  N  +        V V+     L    +
Sbjct: 691 RFDLAAQTIYEFIWNEYCDWYVELAKV-QLQNGNEAQQRATRRTIVRVLEVALRLTHPIM 749

Query: 467 PKLANKIFD 475
           P +  +++ 
Sbjct: 750 PFITEELWQ 758



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA+   I D L R++R+ G +  +  GTD  G      
Sbjct: 32  SDKPSFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGDNTAWIPGTDHAGIATQIV 91

Query: 62  AQ--------------NAGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKR 101
            +               A    KV+  +N      ++  R +   +D S + F  T ++ 
Sbjct: 92  VERQLAEQGVSRHDLGRAAFIDKVWEWKNVSGGTITQQMRRVGCSVDWSREYF--TMDET 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                  ++ ++ ++G IY+G     +  +     +D EV    +         PV   +
Sbjct: 150 RAGVVTEVFVRLFEQGLIYRGKRLVNWDPKLGTAVSDLEVLSEEEDGSMWHIRYPVVGSD 209

Query: 162 E 162
           E
Sbjct: 210 E 210


>gi|167626837|ref|YP_001677337.1| valyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596838|gb|ABZ86836.1| valyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 919

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 134/394 (34%), Gaps = 82/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEVVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLAEDVTIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDR 443
           + I SV +    ++  ++ N         +  LV     D Y +  K   LK    +  +
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAKV-TLKDESLSEQQ 704

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + V Y   +V+  +  L    +P +   I+  L
Sbjct: 705 KNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                   +K++  +       +   R +    D   + F  T +   
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKIWEWKELSGGTITSQMRRIGASPDWDRERF--TMDDGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            D  +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E
Sbjct: 153 SDAVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVAGSDE 212

Query: 163 E 163
           +
Sbjct: 213 K 213


>gi|28868479|ref|NP_791098.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|81732156|sp|Q887M3|SYV_PSESM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28851717|gb|AAO54793.1| valyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 948

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 122/403 (30%), Gaps = 89/403 (22%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         L           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTLHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VL 719

Query: 437 KKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +R        V V+     L   F+P +  +I+  L
Sbjct: 720 WDETASIERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|94311905|ref|YP_585115.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987833|sp|Q1LJ30|SYL_RALME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|93355757|gb|ABF09846.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 873

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE+ K Y  + + YP+ + H+GH     I DV+AR+ R++G +VL   G D  G     A
Sbjct: 36  KEKSKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGRNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPEYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LL  
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITDYAQELLGD 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E           +   I   +
Sbjct: 212 LEGLGWPERVKIMQQNWIGRSE 233



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 115/367 (31%), Gaps = 44/367 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 TGNPLAKDPRFLECTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAGTMVD-ARND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDMGLVKFDEPFTNLLTQGMVL----NETFY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   +  R       A            V   G      EK+S
Sbjct: 592 REDASGKKTWYNPADVDVQTDERGRPAGATAKADGQP--------VVIGGI-----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F++      +   +   G++    +     + N    
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFVMFAAPPEQQLEWSGSGVEGA--SRFLRRVWNYGYA 696

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +   I            A T  D ++      VL++   + +    +  ++  + +++ +
Sbjct: 697 NAQAIRDGAG------TAPTADDAALRREIHTVLKQANYDYERIQYNTVVSATMKMLNAL 750

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                            D  +       E    L  +L   VP +A+ ++  L  A E  
Sbjct: 751 ----------------EDAKTASPAGRREGFSVLLRVLYPVVPHIAHGLWQELGYAAETV 794

Query: 485 CFQSLDQ 491
                  
Sbjct: 795 DILDAAW 801


>gi|310817225|ref|YP_003965189.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755960|gb|ADO43889.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 854

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKRATGHAVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +  QN  + RD    L  S D      T +  ++   + L+  +  K  +Y
Sbjct: 90  MASGGHPKDWTYQNIADMRDQMKPLGFSIDWSREFATCDPEYYGQQQALFIDMLAKDLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G   +        V+  E   +FF++S Y D+LLS  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVIDGKGWRSGAD----VERRELTQWFFKISHYSDELLSAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +   ++   ++           GL+
Sbjct: 206 DGLDDWPAKVKLMQANWIGRSRGLQ 230



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 29/177 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +              
Sbjct: 625 KMSKSKKNVVDPMSIISSYGADTARWFVLSDSPPERDVEWTASGAEAA---------HRH 675

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR   M    +D           +D+ +L    R + ++   + +   + A+A++    
Sbjct: 676 LSRVYRMA---WDIAHGEDAGDASADQDLLRQMHRAIADVTGGVSSFGFNAAIAKLYGFT 732

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           S             L K+N   A+    +       LA L+    P L+ +I+ +L 
Sbjct: 733 SA------------LSKSNASAAAKRTAMLA-----LAQLMAPMTPHLSEEIWTMLG 772


>gi|222478802|ref|YP_002565039.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451704|gb|ACM55969.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 906

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ R+ G DVL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMRGDDVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        +     +   Y  D  + T    ++   + L+++  + G + +    
Sbjct: 96  NPRDWTFDCIDTMKGQMQSMGFGYDWDREVTTCTPDYYQWNQWLFRRFHEAGLVERRDAE 155

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V    D +       PV+  + + +F  ++ Y D+LL   +    
Sbjct: 156 VNWCPSCETVLADEQVE--GDDELCWRCDTPVETRDLDQWFLEITEYADELLEAIDGLAG 213

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 214 WPDSVRQMQRNWIGRQHG 231



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 108/346 (31%), Gaps = 45/346 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G      A     L  + +     L      +  +  + 
Sbjct: 435 WGISRQRYWGTPIPVVHCDDCGSVLVPEADLPVELPEFINTTGNPLDAAEEWKETTCPEC 494

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G      +            D              Y++        D  +A  W P D +
Sbjct: 495 GEPATRET------------DTMDTFVDSSWYFLRYVSPGAEDVPFDLDRANDWMPVDQY 542

Query: 262 VIGKDILRFHAIYWPAFLLS-------ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           V G +    H +Y              A+      + + G +  +GEK+SKS GN + P 
Sbjct: 543 VGGIEHAVMHLLYSRFVTKVLADEEGLAHREPFTNLLAQGMVQLEGEKMSKSKGNTVSPQ 602

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            +++E G D  R F+++     +D  + ++G+K              ++R   ++ +   
Sbjct: 603 RIVDEYGADTARLFIMQAAQPERDFDWAEEGVKST---------HRFLARLTDLVEEYAA 653

Query: 375 GMIPTPGAFTE---SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           G   T  +  +    D+ +       +        +   + AL +   LV  +  Y    
Sbjct: 654 GEAETASSDADRDTIDDYVADEVDAAVAIAGAEYDDLTFNVALREAQDLVGTLRSY---- 709

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       A          +     LL   VP LA ++++ L
Sbjct: 710 ---------RGHADPHPETYERGLDVAVRLLAPVVPHLAEELWETL 746


>gi|307155055|ref|YP_003890439.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306985283|gb|ADN17164.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 854

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  KTKPKYYALSMFPYPSGNLHMGHVRNYVITDVIARLKRMQGHRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  QN    +     L   I ++  + T    ++   + L+ +    G  
Sbjct: 90  AIERGIHPAKWTYQNIAQMKQQLQQLGLSIDWNREVTTCSPDYYKWTQWLFLQFFQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V          A+   V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQVDAEGKSWRSGAK---VERKLLRQWFLKITDYAEQLLND 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 207 LDKLTGWPERVKLMQANWIGKSIG 230



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D   +
Sbjct: 600 PKDPETGDPLEVFYEKMSKSKYNGVDPKQVLGKYGADTARMFILFKAPPEKDLEWDDADV 659

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +          N V R V   + ++        + T+ ++ +       ++EI ++++
Sbjct: 660 EGQFR------FLNRVWRLVGDYIANHKPSKKKNDSLTKVEQDLRRAIHIAIKEISDDLE 713

Query: 407 -NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                + A+++++ L    +      K +E              V  E +  L ILL  F
Sbjct: 714 GEYQFNTAVSELMKL----NNALSEAKCYE------------SPVYTEGVETLLILLAPF 757

Query: 466 VPKLANKIFDILFVAD 481
            P +A +++  L  +D
Sbjct: 758 APHIAEELWHQLGNSD 773


>gi|119953611|ref|YP_945821.1| isoleucyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|259511498|sp|A1R0Q9|SYI_BORT9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119862382|gb|AAX18150.1| isoleucyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 1044

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 131/401 (32%), Gaps = 24/401 (5%)

Query: 95  IRTTEKRHHDTCRILWKKIS----DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            RT     +      +  I           +        L+   +    E  +       
Sbjct: 396 YRTNSPLIYRPISSWFVNIEAIKEKLIKSNEQINWMPSHLKKGRFGKWLENARDWAISRN 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
               NP+          ++     + L          L  ++ +++    + G   +  S
Sbjct: 456 RFWGNPIPVWICSKTGNKICIGSKEELERLSGQKVNDLHKDKVDKITWPSEYGGVYVRTS 515

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                           ++  W ++ +    +  Y      +    +PAD    G D    
Sbjct: 516 ---------------EVLDCWFESGSMPYASKHYPFKDKDNFHNIFPADFIAEGLDQTRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +      L  N      + +   +   G K+SKSL N  DP+EVI   G DALR +
Sbjct: 561 WFYTLTILGTALFENTAFKNVIVNGLVLSSDGRKMSKSLRNYTDPMEVINTFGADALRLY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTES 386
           LV       D     D   K V  ++   I N  S  ++   I K               
Sbjct: 621 LVMSPVIRADDLKYSDDGVKDVLKNIIIPIWNAYSFFITYAIIDKFEPNNNINLHKTNIL 680

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS- 445
           D+ I+S    + + + E +    + +++ ++++ + +++ ++  +      K+  D    
Sbjct: 681 DKWIVSEIESLKKILNEEIDKYNLTKSIEELLAFIDKLNNWYIRRSRRRFWKSENDNDKI 740

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                   VI+ L ++L  F+P L  +I+  L   DE    
Sbjct: 741 DAHETLYYVIKNLMLMLAPFIPFLTEEIYQNLKTKDEKESI 781



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    + +       
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYKTMKGKQVKRYFGWDTHGLPVEYEVEKSLKISGRY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + ++ ++     L   I +++  +T +    ++   +++ +
Sbjct: 107 EIEKYGIDKFNEECRKIVLRYTKEWQKTISRLGRWIDFENNYKTMDTTFMESVWWVFQTL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|254373675|ref|ZP_04989159.1| valyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151571397|gb|EDN37051.1| valyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 919

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDVAIKHDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T ++   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDEGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVADSDEK 213


>gi|90416556|ref|ZP_01224487.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331755|gb|EAS46983.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 964

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 131/405 (32%), Gaps = 91/405 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +    ++          +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 376 IEPLLTNQWYVDAKKLAGPAIEAVEDGRIKFVPQQYENMYFSWMR-NIQDWCISRQ-LWW 433

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                            + ++  W  +      T G+ + 
Sbjct: 434 GHQIPAWYDEAGKAYVGSSEADVREKYNLGDIALKQDEDVLDTWFSSALWTFGTQGWPEQ 493

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHK 299
            D  K    P D+ V G DI+ F         +           +P      +      +
Sbjct: 494 TDRLKMFH-PTDVLVTGFDIIFFWVARMVMMSMHLIKDEKGEPEIPFKTVYVTGLIRDEQ 552

Query: 300 GEKISKSLGNVIDPIEVIEEV-------------------------------------GV 322
           G+K+SKS GNV+DP+++I+ +                                     G 
Sbjct: 553 GQKMSKSKGNVLDPLDMIDGIDIESLLAKRTGNMMQPQQAAKIASRTRKQFPDGIEPHGS 612

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL------KDYDGM 376
           DALR+ L    + G+D  +D   L+     +  N I N  SR V M        ++    
Sbjct: 613 DALRFTLCALASTGRDINWDMKRLEG--YRNFCNKIWN-ASRYVLMNATGENGAENCGQD 669

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP- 433
                  + +D  I+S   +   ++ + + +     A   +   V     D Y +  KP 
Sbjct: 670 NSEDYTLSLADRWIISRLQQAETDVTDAINSYRFDLAAQALYDFVWNEYCDWYLELSKPV 729

Query: 434 -WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            W+ +  +P          V V+     L    +P +  +I+  +
Sbjct: 730 LWD-ENGDPQLQKGTRRTLVRVLEATLRLAHPMLPFITEEIWQNI 773



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           HIGHA +  I D L R++R+ G + L+  GTD  G       + 
Sbjct: 35  EPYSIIIPPPNVTGSLHIGHALQHGIMDALTRYNRMKGKNALWQVGTDHAGIATQMVVER 94

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       ++  R + + +D   + F  T +   +
Sbjct: 95  KLAAEGQPGREEMGREKFIEKIWEWKEESGGNITQQMRRLGNSVDWETERF--TMDDGFY 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++   G IY+G     +  +     +D EV              P+
Sbjct: 153 QGVQEAFIRLHADGLIYRGKRLVNWDPKLHTAISDLEVENREVKGKMWHLRYPL 206


>gi|152998001|ref|YP_001342836.1| valyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150838925|gb|ABR72901.1| valyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 927

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/415 (17%), Positives = 132/415 (31%), Gaps = 81/415 (19%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +  V            +  ++    + ++  + +     +   E+     +P +  N 
Sbjct: 333 LLEKIVDHKLKVPRGERGNTVIEPYLTQQWYVAVESLAKPAIEAVENGDIQFVPKQWENT 392

Query: 196 VISFVKSGLKDLSLSRKTFDWG--IKIPDD----------------------------PQ 225
             ++++  L+D  +SR+   WG  I    D                             +
Sbjct: 393 YFAWMRD-LQDWCISRQ-LWWGHQIPAWYDADGKHYVGKSEEEVRAKYSLAADVELTQDE 450

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            ++  W  +      T G+ +      A+F  +D+ V G DI+ F    +       +  
Sbjct: 451 DVLDTWFSSALWTFATQGWPEETQ-DFAEFSESDVLVTGFDIIFFWVARMIMMTLKFTNK 509

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------------ 319
           +P      +      +G+K+SKS GNVIDP+++I                          
Sbjct: 510 VPFKTVYITGLIRDERGDKMSKSKGNVIDPLDLIHGIDIESLVAKRTYGMMQPRLAEKVE 569

Query: 320 -------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
                         G DALR+ L    + G+D  +D + L+     +  N I N  +R V
Sbjct: 570 KNTRETYPEGIQAYGTDALRFTLCSLASGGRDIKFDLNRLEG--YRNFCNKIWN-ATRYV 626

Query: 367 SMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            M  +D D          + +D+ I+S        +           A   +   +    
Sbjct: 627 LMNTEDQDCGQNGAEVELSLADKWIISRLQYAEDAVNRAFDTHRFDLASQALYEFMWHEY 686

Query: 424 VDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            D Y +  KP  L   N   A         V V+     L    +P L  +I+  
Sbjct: 687 CDWYLELSKP-VLWDENATAAQLTGTRRTLVRVLEAFLRLAHPMMPFLTEEIWQR 740



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 53/170 (31%), Gaps = 18/170 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA++  + D + R  R+ G   L+  G D  G       +  
Sbjct: 32  PFSIMIPPPNVTGSLHMGHAFQHTLMDAMIRRERMKGSRTLWQPGCDHAGIATQMVVERQ 91

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
                                 +  Q+     D   VL  S  +D    T +       +
Sbjct: 92  LAAQNITRHDLGREKFLEKVWEWKGQSGGTISDQMRVLGDSVAWDKERFTMDPGMSAAVQ 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ D+G IY+G     +        +D EV    +  +      P+
Sbjct: 152 EVFVRLFDEGIIYRGQRLVNWDPVLHTAISDLEVISEEENGFMWYFRYPL 201


>gi|262371100|ref|ZP_06064422.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313986|gb|EEY95031.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 873

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  + YI +   YP+ + H+GH     I DV++RFHRL G  VL   G D  G     AA
Sbjct: 35  EGPRRYILSMFPYPSGKLHMGHVRNYTIGDVISRFHRLKGETVLQPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 95  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYRWEQWLFVQLYKKGLIY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 155 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 210

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +            G+
Sbjct: 211 DTLKDGWPQQVLTMQRNWIGRSQGM 235



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 21/193 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 634 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 687

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            +   + +       +Q++ ++++ +   + A+A ++
Sbjct: 688 RVWRLVASFLEKGNAASAIDTAQLSTEAQDLRRKTHETIQKVGDDIERRHAFNTAIAAMM 747

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 748 ELLNANNKF--------EAKNDND-----IAVARESITTLLTLLAPFAPHLSQTLLAEFG 794

Query: 479 VADENRCFQSLDQ 491
           +   +  F ++D+
Sbjct: 795 LDLTSVLFPTVDE 807


>gi|54297257|ref|YP_123626.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|60390670|sp|Q5X5L8|SYL_LEGPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53751042|emb|CAH12453.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 823

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F ++++Y D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITSYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++          G
Sbjct: 207 DSLDEWPAQVKQMQRNWIGKSIG 229



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 134/444 (30%), Gaps = 45/444 (10%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     + +   +DI +D       +         +  +
Sbjct: 330 YGSGAVMAVPAHDQRDWEFAQKYQLPVKQVIKPIDIEHDFNQSAYTEEGILINSNQFDNL 389

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                I         +   +A  N      G   Q Y     P+   E+ G         
Sbjct: 390 LSSKAIQVITNFLEENDAGKATINYRLRDWGVSRQRYWGTPIPMIICEQCGIVPVPDEEL 449

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +L           P+ +  E ++                  G     +       +++
Sbjct: 450 PVVLPENVDFTGTGSPLTQCKEFVNV------------TCPKCGQDANRETD-TFDTFVE 496

Query: 234 ALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSA 282
           +   Y         +     +AK+W P D ++ G +    H +Y   F         +++
Sbjct: 497 SSWYYARFACKGQENAMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNS 556

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  K + + G +L  G K+SKSLGNV+DP  +I   G D  R F++      +   + 
Sbjct: 557 DEPF-KALLTQGMVLKDGHKMSKSLGNVVDPNHLINTYGADTARLFVMFASPPEQSLEWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGAFTESDESILSVCSRV 397
             G++          +     +   M++   D +                +    +  ++
Sbjct: 616 DSGVEGAHR--FLKRVWAFSHQHRDMLIDINDSILSGNGHVDWKEAESRLKKSRHIVHQI 673

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L +   +      +  ++  + L +E+  Y          +T  D+     +     I  
Sbjct: 674 LAQATHDYDRNQFNTVVSGCMKLFNEISDY--------SIETENDK-----FFIHSSISI 720

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  LL    P + + ++  L    
Sbjct: 721 LLRLLAPITPHICHCLWQQLGFDK 744


>gi|52841578|ref|YP_095377.1| leucyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|60390674|sp|Q5ZVU2|SYL_LEGPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52628689|gb|AAU27430.1| leucyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 823

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F ++++Y D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITSYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++          G
Sbjct: 207 DSLDEWPAQVKQMQRNWIGKSIG 229



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 134/444 (30%), Gaps = 45/444 (10%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     + +   +DI +D       +         +  +
Sbjct: 330 YGSGAVMAVPAHDQRDWEFAQKYQLPVKQVIKPIDIEHDFNQSAYTEEGILINSNQFDNL 389

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                I         +   +A  N      G   Q Y     P+   E+ G         
Sbjct: 390 LSSKAIQVITNFLEENDAGKATINYRLRDWGVSRQRYWGTPIPMIICEQCGIVPVPDEEL 449

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +L           P+ +  E ++                  G     +       +++
Sbjct: 450 PVVLPENVDFTGTGSPLTQCKEFVNV------------TCPKCGQDATRETD-TFDTFVE 496

Query: 234 ALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSA 282
           +   Y         +     +AK+W P D ++ G +    H +Y   F         +++
Sbjct: 497 SSWYYARFACKGQENAMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNS 556

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  K + + G +L  G K+SKSLGNV+DP  +I   G D  R F++      +   + 
Sbjct: 557 DEPF-KALLTQGMVLKDGHKMSKSLGNVVDPNHLINTYGADTARLFVMFASPPEQSLEWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGAFTESDESILSVCSRV 397
             G++          +     +   M++   D +                +    +  ++
Sbjct: 616 DSGVEGAHR--FLKRVWAFSHQHRDMLIDINDSILSGNGHVDWKEAESRLKKSRHIVHQI 673

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L +   +      +  ++  + L +E+  Y          +T  D+     +     I  
Sbjct: 674 LAQATHDYDRNQFNTVVSGCMKLFNEISDY--------SIETENDK-----FFIHSSISI 720

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  LL    P + + ++  L    
Sbjct: 721 LLRLLAPITPHICHCLWQQLGFDK 744


>gi|310659180|ref|YP_003936901.1| isoleucyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|308825958|emb|CBH21996.1| Isoleucyl-tRNA synthetase 2 (Isoleucine--tRNA ligase 2) (IleRS 2)
           [Clostridium sticklandii]
          Length = 1034

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 135/377 (35%), Gaps = 20/377 (5%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  Y     L+D+   N++ V    D        N ++ + +  +    S Y    
Sbjct: 398 YYAKPSYYIEMTKLKDQLVSNNNTVNWFPDYVGEKRFGNWLENVND--WAISRSRYWGTP 455

Query: 177 LSYYESHPEFILPIERRNE----VISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIM 228
           L+ +         I   +E     I  +   ++                ++       ++
Sbjct: 456 LNIWTCSCGHKESIGSISELVEKSIEPIDESIELHRPYVDDIHINCPKCNEKMTRVKDVI 515

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+ +       Y      +  + +PAD    G D     F+++   +  +    P 
Sbjct: 516 DCWFDSGSMPFAQHHYPFENKENFDELFPADFICEGIDQTRGWFYSLIAISTFVMGKSPY 575

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + +   +   G+K+SKS GN +DP E+ ++ G D LR++L+          +D D L
Sbjct: 576 KNVLVNDLILDKDGKKMSKSRGNTVDPFEMFDKYGADVLRWYLLYVSPAWTPTKFDVDAL 635

Query: 347 KKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           K+  +        + N  S   +    D            E D  ILS  + + + +   
Sbjct: 636 KEVQSKFFGTIKNVYNFFSLYANTDNIDPKEFFIPYNERPELDRWILSKYNNLKKYVEVE 695

Query: 405 MQNQLIHRALAQVISLVSE--VDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +    + + +  +   V+E   + Y     ++ W+ + T   +  +V   T EV+  +A 
Sbjct: 696 LDRYDMTKTVRAIQDFVNEDLSNWYIRRSRRRFWDTELTLDKK--SVYNTTFEVLVGIAQ 753

Query: 461 LLQAFVPKLANKIFDIL 477
           ++  F P L+ +++  L
Sbjct: 754 MVAPFSPFLSEELYRKL 770



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++             N +P I H     + D + R+  + G  V    G D HG  +   
Sbjct: 36  EDSPSFVFYEGPPTANGKPGIHHVLARTLKDSVCRYKTMSGYQVKRKAGWDTHGLPVEIE 95

Query: 62  AQN----------AGVTTKVF-------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                K F       V +    +R M + +   I  D+   T +  +
Sbjct: 96  VEKKLSLGSKQEIEEYGIKEFNEACRKSVFEYESLWRQMTERMGYLIDMDNPYITLDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   +  K   +G IY+G     Y  R        EV +G      N      +  + 
Sbjct: 156 IESVWWILDKFHKEGYIYEGHKILPYCSRCGTGLASHEVAQGYKEVKTNTLIAKFKRKDA 215

Query: 163 EGYFF 167
           E  +F
Sbjct: 216 ENEYF 220


>gi|254672701|emb|CBA06614.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 945

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S +     D Y +  K  +L+     R     +
Sbjct: 680 DRLNQTIEQVTQAYETYRFDLAAETLYSFMWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|238899076|ref|YP_002924758.1| leucine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511546|sp|C4K7R7|SYL_HAMD5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229466836|gb|ACQ68610.1| leucine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 869

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  KKEKYYCLAMWPYPSGRLHMGHVRNYTITDVIARYQRMLGKNVLQPMGWDAFGLPAEGAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +   N +  +     L  +YD    + + +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKTSPIDWTKANIQYMKKQLQSLGFAYDWSRELTSCKPEYYRWEQWFFTQLYEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +  +D     +++V  G          + V+      +F +++AY D+LL   
Sbjct: 151 KKTSDVNWCPQDFTVLANEQVIDG----RCWRCDSKVERKSIPQWFIKITAYADQLLDDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 207 DELEHWPEQVKTMQRHWIGRSEG 229



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 79/196 (40%), Gaps = 20/196 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N IDP  ++E+ G D +R F++   A      + + GL+       A     
Sbjct: 619 SKMSKSKNNGIDPQAIVEKYGADTVRLFMMFASAPEMTLEWQESGLEG------AYRFLK 672

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            + R V   +               + +++     + + ++ +++  +   + A+A ++ 
Sbjct: 673 RLWRFVFDHVIQGPTQPLKKENLNSTQKNLRRNLHKTIAKVTDDIGRRQTFNTAIAAIME 732

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++++ R      P     T  DRA     +  E    +  +L  F P ++  ++  L  
Sbjct: 733 LMNQLYR-----AP---TNTEQDRA-----LIQEACISVIKMLYPFTPHISFILWQHLHQ 779

Query: 480 ADENRCFQSLDQRLKP 495
           + +     ++D  L P
Sbjct: 780 SPDETHPLNIDDSLWP 795


>gi|86131042|ref|ZP_01049641.1| Isoleucyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818453|gb|EAQ39613.1| Isoleucyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 1151

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 96/270 (35%), Gaps = 7/270 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           ++ VW D+ +       Y           W  AD    G D     F+ ++  A ++  +
Sbjct: 621 LIDVWFDSGSMPYAQWHYPFENKELVEDTWRKADFIAEGVDQTRGWFYTLHAIATMIFDD 680

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +     V +   +   G+K+SK LGN  DP E +E+ G DA R++++       +  +D 
Sbjct: 681 VAYKNVVSNGLVLDKNGQKMSKRLGNATDPFETLEKYGPDATRWYMISNANPWDNLKFDL 740

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEI 401
           +G+++                ++   L ++             E D  ILS    ++ E+
Sbjct: 741 EGIEEVKRKFFGTLYNTYNFFALYANLDNFAFAEAEIELSQRPEIDRWILSELHSLIAEV 800

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            +        +A   + + V E   + +    +    K        +        +  +A
Sbjct: 801 DKFYAEYEPTKATRAIDTFVQENLSNWFVRLSRRRFWKGEYATDKISAYQTLYTCLETVA 860

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSL 489
            L     P    K++  L  A     F+S+
Sbjct: 861 KLSAPVAPFFMEKLYKDLNAATGKENFESI 890



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P + H     I D+  R+  + G  V    G D HG  +    + 
Sbjct: 57  KPYVFFEGPPSANGLPGVHHVLARAIKDIFPRYKTMKGFQVKRKAGWDTHGLPVELGVEK 116

Query: 65  AGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK  +                  + +  + D+ + +   +  +D   T + ++ +T
Sbjct: 117 ELGITKEDIGTKITVEEYNEACKKAVMRYTDIWNDLTEKMGYWVDMEDPYITYKAKYMET 176

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              L K+I +K  +YKG     YS +     +  E+ +   
Sbjct: 177 VWWLLKQIYNKDLLYKGYTIQPYSPKAGTGLSSHELNQPGC 217


>gi|317148825|ref|XP_001822941.2| leucyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 948

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     A
Sbjct: 40  TEKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENA 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N    ++    +  S+  D  + T     ++  + ++  +  KG  
Sbjct: 100 AIERGIDPAEWTKDNIARMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYKKGLA 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+ +  + +FFR++ +++ LL+ 
Sbjct: 160 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFRITDFKEALLND 216

Query: 180 Y 180
            
Sbjct: 217 L 217



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/450 (12%), Positives = 121/450 (26%), Gaps = 101/450 (22%)

Query: 113 ISDKGDIYKGCYSGWYSLRD---EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
               GD+    + G+ + R    +  ++ +   +  +        + V+      +    
Sbjct: 398 HLPAGDMKAYTHEGFLNSRCWKYQGLHSREAGQQIINDLRAVGHGDTVEQWRLRDWLISR 457

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL--------KDLSLSRKTFDWGIKIP 221
             Y    +          +P+      +   K             L  S +  +      
Sbjct: 458 QRYWGTPIPIIHCGDCGPVPVPDDQLPVKLPKIEGDWLKGKRGNPLESSDEWVNTECPRC 517

Query: 222 DDPQY----IMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             P       M  ++D  + Y              S +   P D+++ G +    H +Y 
Sbjct: 518 QGPAKRDTDTMDTFVD-SSWYFLRFLDSANRRQPFSPSSARPVDVYIGGVEHAILHLLYA 576

Query: 275 ------------WPAFLLSAN----LPLPKKVFSHGFI---------------------- 296
                       +P      +    L   K + S G +                      
Sbjct: 577 RFIYKFLAKSGLFPEIAHVGDVSRPLEPFKTLLSQGMVHGKTYSEPSTGRFLHPSEMDLS 636

Query: 297 --------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                             EK+SKS  N +DP     + G DA R  ++      +   +D
Sbjct: 637 SPDKPVIKGTQITPNVSFEKMSKSKHNGVDPTACALKYGADATRAHVLFSAPVSEVLEWD 696

Query: 343 KDGL--KKRVNADLANGIGNLVSRSVS----------MILKDYDGMIPTPGAFTESDESI 390
           +  +   +R    +   + +      S          M+      +  +P   + +D   
Sbjct: 697 ETKIVGVERWFGRVWKLVQDAQQTLASSSYTFNPDELMLSNHATALPYSPQNLSGNDADA 756

Query: 391 LSVCSRVLQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +    R +  +   ++N    ++  ++ +  L +                       +  
Sbjct: 757 VLFTHRTILSVTSCIENNPYGLNTVISDLTKLTNS----------------LTSSTPSSP 800

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V    I  L  LL    P LA++ ++ L 
Sbjct: 801 QVLYLCISSLLRLLAPIAPALASESWETLN 830


>gi|288959465|ref|YP_003449806.1| leucyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911773|dbj|BAI73262.1| leucyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 856

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 86/237 (36%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+ARF R  G +VL   G D  G     AA
Sbjct: 30  SRPKYYVLEMFPYPSGRIHMGHVRNYTIGDVIARFKRAKGFNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    R     +   I +D  + T +  ++   + ++      G  Y
Sbjct: 90  LEKKVHPAAWTRENIATMRGQLKTMGLSIDWDREVATCDVEYYRHEQRMFLDFLKAGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  +   +F +++AY ++LL   
Sbjct: 150 RKESWVNWDPVDNTVLANEQVIDG----RGWRTGALVEKRKLSQWFLKITAYAEELLQGL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           E+   +   +    E      +G          F + IK  ++   +     D L  
Sbjct: 206 ETLDRWPERVRIMQENWIGKSTG--------VRFRFAIKGREEELEVFTTRPDTLFG 254



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 113/381 (29%), Gaps = 73/381 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G    +    D+L         F  P       +    +
Sbjct: 422 WGVSRQRYWGCPIPVIHCESCGI---VPVPADQLPVVLPEDVTFDKP----GNPLDHHPT 474

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                  S            D       +     +  +                  D ++
Sbjct: 475 WKHTSCPSCGKPALRETDTFDTFIESSWYFARFCSPKSEDAAFTRSAVDYWLG--VDQYI 532

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLP----KKVFSHGFILHKG---------- 300
            G +    H +Y   +         L+ + P      + + +H      G          
Sbjct: 533 GGIEHAVLHLLYSRFWTRALKTCGYLNLDEPFTGLFTQGMVNHETYKDAGTGAWLAPTDL 592

Query: 301 ----------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                                 EK+SKS  NV+DP  +I   G DA R F++ +    +D
Sbjct: 593 TRNDKGEWVRADSGAPVTVGRVEKMSKSKKNVVDPAHIIGTYGADAARLFMLSDSPPERD 652

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397
             + + G+      D A    N + R V+    +      P PG+F    ++   +  + 
Sbjct: 653 LEWTESGI------DGAWRYINRLWRMVTEAPVELPAAGTPIPGSFGPKADAARRLVHKT 706

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +  + E++     ++A+A+V  L + +          EL       A    +V  E    
Sbjct: 707 IAGVSEDLDKFRFNKAVARVRELSNAL---------GELDGAGEGEA----WVLREGFES 753

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  L+   +P L  +++  L 
Sbjct: 754 LVRLVGPMMPHLGEELWARLG 774


>gi|260557275|ref|ZP_05829491.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409381|gb|EEX02683.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 959

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGTDARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|240114857|ref|ZP_04728919.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|260441328|ref|ZP_05795144.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 876

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 485 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 539

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 540 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 595

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 596 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 642

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 643 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 696

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 697 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 753

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 754 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 803

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 804 WPTVDEA 810


>gi|319791139|ref|YP_004152779.1| leucyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315593602|gb|ADU34668.1| leucyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 876

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 7/235 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I D+L R+ R+ G +VL   G D  G     AA
Sbjct: 31  SRKKYYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    R     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNGVPPAKWTYENIDYMRGQLQAMGLAIDWSREIATCDPSYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+ ++S Y ++LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDGKG----WRTGATVERREIPGYYLKISDYAEELLEHT 206

Query: 181 ESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           +   P +   ++   E       G++           G  I D   Y+     D 
Sbjct: 207 QHKLPGWPERVKLMQENWIGKSEGVRFAFTHDIQDASGQLIQDGRMYVFTTRADT 261



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 69/494 (13%), Positives = 134/494 (27%), Gaps = 89/494 (18%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G       G   H ++    A   G+     V  +     D     D   D       +R
Sbjct: 338 GYGDGAVMGVPAHDERDFAFANKYGIEIIQVVLVDDEPHFDYHKWQDWYGDK------QR 391

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                   +  ++ K  +    ++       E          G   Q Y     P+   E
Sbjct: 392 GVTINSDNFSGMTYKEAVAAVAHALGQKGLGELQTTWRLRDWGVSRQRYWGTPIPIIHCE 451

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E G           +L           P+ +     + V   +   +  R+T        
Sbjct: 452 EHGAVPVPEKDLPVVLPTDCVPDGSGNPLNKHEGFHAGVVCPVCGKAARRET-------- 503

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL-- 279
            D              Y                + P D ++ G +    H +Y   +   
Sbjct: 504 -DTMDTFVDSSWYFMRYCDPKNDQAMVAEGADYWMPMDQYIGGIEHAILHLLYARFWTKV 562

Query: 280 ------LSANLPLPK-----KVFSHGFI--LHKGEK------------------------ 302
                 + A+ P  K      V +H F     KG K                        
Sbjct: 563 MRDLGLVKADEPFAKLLTQGMVLNHIFYKRNEKGGKDYFPPLEVTPVLDAQGRITGGTTA 622

Query: 303 ------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                       + KS  N +DP ++IE+ G D  R + +          ++   ++   
Sbjct: 623 DGTKVEYGGVGKMGKSERNGVDPQDLIEKYGADTARLYTMFTAPPEATLEWNDAAVEGS- 681

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQ 408
                      + R  +  +   D      G  AF ++ +++      VL+++  + Q  
Sbjct: 682 --------YRFLRRVWNFGVTQADVAPAKAGTQAFGKAAQALRREVHTVLRQVDYDYQRM 733

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +  ++  + L++      +  KP      +   A+ V     E    L   L    P 
Sbjct: 734 QYNTVVSGAMKLLNA----LEGFKP----DGSAGDAAAVR----EGFGILLRCLYPATPH 781

Query: 469 LANKIFDILFVADE 482
           +A +++  L    +
Sbjct: 782 IAQQLWTELGYDKD 795


>gi|270308298|ref|YP_003330356.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270154190|gb|ACZ62028.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 1014

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 144/410 (35%), Gaps = 22/410 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQ 153
            +R H T    W+  S      K   Y    ++RDE    + ++        DG++ +  
Sbjct: 411 NERMHHTYPFCWRCDSPLIYYAKQSWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDWL 470

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            N + W      ++       +      +     +   +       ++  L         
Sbjct: 471 ENNIDWAFSRERYWGTPVPIWRCEKCGRTECVGGIDELKAKPNFKGMQEKLDIHRPYVDE 530

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPADLHVIGKD 266
           + +              +M  W D+    +    Y         +K   +PAD      D
Sbjct: 531 WTYDCDKCGGNMKRVTEVMDCWYDSGAMPVAQYHYPFESESRSIAKDGRFPADYICEAVD 590

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++++  + L+         +     +  +GEK+SKS  NVI P  V+++ G DA
Sbjct: 591 QTRGWFYSLHAISTLIFNRPCYQNVICLGHILDERGEKMSKSRNNVIQPATVLDKYGADA 650

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           +R++       G    +  + L   V       + N+ S  V+    + D   P+     
Sbjct: 651 VRWYFYTAAPPGNARRFS-EKLVGEVTRQFLLMLWNVYSFFVT--YANIDSFTPSEKYLE 707

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT 439
           G   E D  ILS  ++++ ++ + + N    +A  ++   V  + + Y    +    K  
Sbjct: 708 GEVPELDRWILSELNQLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSE 767

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           N     +        +  L+ LL  F P +A +++  L ++ +    +S+
Sbjct: 768 NDADKLSAYQALYTCLVTLSRLLAPFTPFVAEELYQNLVLSADPSALESV 817



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ ++  +       N +P I H    +  DV+ R+  + G       G D HG  +   
Sbjct: 36  RDGKRFTLYEGPPTANGRPGIHHVLSRVFKDVIPRYKVMKGYYAPRIGGWDTHGLPVELE 95

Query: 62  AQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                         +   +V + ++    +A  +D+  D+   T + 
Sbjct: 96  VEKELGFTSKNDIEKYGIAEFNARCRSSVFKYVSEWNKLTERIAYWVDL--DNAYITMDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++     K++ DKG +Y+G     +  R     +  EV +G  
Sbjct: 154 NYIESDWWALKQMWDKGLVYQGHRVTPHCPRCGTSLSSHEVAQGYK 199


>gi|104783754|ref|YP_610252.1| leucyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079078|sp|Q1I4G7|SYL_PSEE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|95112741|emb|CAK17469.1| leucyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 868

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIDYMKTQLKSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 151 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE+ G D  R F++          +   G++         G   
Sbjct: 626 EKMSKSKNNGVDPQSMIEQYGADTCRLFMMFASPPDMSLEWSDSGVE---------GASR 676

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +        +P      A ++  + I       +++   ++      + A+AQ
Sbjct: 677 FLRRVWRLAQAHVAQGLPGQLDIAALSDEQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+++++ +      + P     T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 737 VMTVMNVL-----EKAPQV---TAQDRA-----LLQEGLEAVTLLLAPITPHISHELWKQ 783

Query: 477 LFVADE--NRCFQSLDQ 491
           L       +  + S+D+
Sbjct: 784 LGHEQAVIDATWPSVDE 800


>gi|238494030|ref|XP_002378251.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220694901|gb|EED51244.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 960

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     A
Sbjct: 80  TEKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENA 139

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N    ++    +  S+  D  + T     ++  + ++  +  KG  
Sbjct: 140 AIERGIDPAEWTKDNIARMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYKKGLA 199

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+ +  + +FFR++ +++ LL+ 
Sbjct: 200 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFRITDFKEALLND 256

Query: 180 Y 180
            
Sbjct: 257 L 257



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/450 (12%), Positives = 121/450 (26%), Gaps = 101/450 (22%)

Query: 113 ISDKGDIYKGCYSGWYSLRD---EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
               GD+    + G+ + R    +  ++ +   +  +        + V+      +    
Sbjct: 438 HLPAGDMKAYTHEGFLNSRCWKYQGLHSREAGQQIINDLRAVGHGDTVEQWRLRDWLISR 497

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL--------KDLSLSRKTFDWGIKIP 221
             Y    +          +P+      +   K             L  S +  +      
Sbjct: 498 QRYWGTPIPIIHCGDCGPVPVPDDQLPVKLPKIEGDWLKGKRGNPLESSDEWVNTECPRC 557

Query: 222 DDPQY----IMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             P       M  ++D  + Y              S +   P D+++ G +    H +Y 
Sbjct: 558 QGPAKRDTDTMDTFVD-SSWYFLRFLDSANRRQPFSPSSARPVDVYIGGVEHAILHLLYA 616

Query: 275 ------------WPAFLLSAN----LPLPKKVFSHGFI---------------------- 296
                       +P      +    L   K + S G +                      
Sbjct: 617 RFIYKFLAKSGLFPEIAHVGDVSRPLEPFKTLLSQGMVHGKTYSEPSTGRFLHPSEMDLS 676

Query: 297 --------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                             EK+SKS  N +DP     + G DA R  ++      +   +D
Sbjct: 677 SPDKPVIKGTQITPNVSFEKMSKSKHNGVDPTACALKYGADATRAHVLFSAPVSEVLEWD 736

Query: 343 KDGL--KKRVNADLANGIGNLVSRSVS----------MILKDYDGMIPTPGAFTESDESI 390
           +  +   +R    +   + +      S          M+      +  +P   + +D   
Sbjct: 737 ETKIVGVERWFGRVWKLVQDAQQTLASSSYTFNPDELMLSNHATALPYSPQNLSGNDADA 796

Query: 391 LSVCSRVLQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +    R +  +   ++N    ++  ++ +  L +                       +  
Sbjct: 797 VLFTHRTILSVTSCIENNPYGLNTVISDLTKLTNS----------------LTSSTPSSP 840

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V    I  L  LL    P LA++ ++ L 
Sbjct: 841 QVLYLCISSLLRLLAPIAPALASESWETLN 870


>gi|189030334|sp|Q5FAJ3|SYL_NEIG1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 485 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 539

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 540 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 595

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 596 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 642

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 643 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 696

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 697 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 753

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 754 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 803

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 804 WPTVDEA 810


>gi|300088238|ref|YP_003758760.1| leucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527971|gb|ADJ26439.1| leucyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 815

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 5/194 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y M  +D  AR+ R+ G +VL   G D  G     AA 
Sbjct: 33  KPKWYALTMFPYTSGDLHIGHWYAMAPSDAYARYKRMQGYNVLHPMGFDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +  +N  N R     +     +D  + T    ++      + K+   G  Y+
Sbjct: 93  KRGIHPREWTMKNVENMRKQIKSMGSVYDWDREVITCLPEYYKWTEWFFLKLYQAGLAYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V    + +       PV+  + E +FFR++ Y D+L+ +  
Sbjct: 153 AKAPVNWCASCQTVLANEQVVGNGECERCEG---PVEKRDLEQWFFRVTKYADELMDHEG 209

Query: 182 SHPEFILPIERRNE 195
                 +   +RN 
Sbjct: 210 LDWPERIKTMQRNW 223



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 97/283 (34%), Gaps = 36/283 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY------- 274
           D              Y +        D  K ++W P D++  G +    H  Y       
Sbjct: 495 DTMDTFMCSSWYYLRYCSPHDDKHAFDPEKTRYWMPVDIYTGGAEHAVMHLFYSRFFVKA 554

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L        ++F+ G I  +  K+SKS GNV++P   + E G D +R +L+    
Sbjct: 555 LRDMGLVDFSEPFTRLFNQGTITSQHAKMSKSRGNVVNPDRYVNEQGADTVRAYLMFVGP 614

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               G ++  G+          GI    +R   +  + Y           E++  ++   
Sbjct: 615 WELGGDWNDSGI---------GGISRWFNRVWKLATEPYQPGGFD----EEAEAELIRHT 661

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++  ++     +  LA ++   +    Y              D          + 
Sbjct: 662 HQTVRKVNTDLDALQFNTMLAALMEFTN----YL---------GPAKDSGKVSAETWKDA 708

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKP 495
           + +L ++L    P LA +++++        N+ F +  + L  
Sbjct: 709 VNKLILMLAPTAPHLAEELWELTGHEYSVHNQQFPTWQEELTA 751


>gi|268600513|ref|ZP_06134680.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044687|ref|ZP_06570396.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268584644|gb|EEZ49320.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291011581|gb|EFE03577.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 878

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 487 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 541

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 542 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 597

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 598 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 644

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 645 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 698

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 699 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 755

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 756 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 805

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 806 WPTVDEA 812


>gi|295669003|ref|XP_002795050.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226285743|gb|EEH41309.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 972

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK YI     YP+   H+GH     IAD+LARF  + G DVL   G D  G     AA
Sbjct: 66  GKEKAYILAMFPYPSGTLHMGHLRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N ++    +   +D    + T     +   + L+  + ++G  Y
Sbjct: 126 IERGIDPAQWTMQNIANMKEQFMAIGAHFDWNRELMTCSPEFYKHTQRLFLMLYERGLAY 185

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+    + +FFR++A+++ LL   
Sbjct: 186 QAKALVNYDPVDKTVLANEQVNANGCSWRSGAKVKKVEL---KQWFFRITAFKEALLKDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++     L       V+S  +  L   + +   F       +    +     D L
Sbjct: 243 DA-----LADGWPERVLSMQRHWLGKSTGAHIKFLVSAPDDNYDIQVFTTRPDTL 292



 Score = 48.6 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 20/192 (10%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP   I   G DA+R  ++      +   +D+  +   +R    L
Sbjct: 668 NITFEKMSKSKHNGVDPTTCINTYGSDAVRAHILFSAPVSEILEWDESKIVGMERWFNRL 727

Query: 355 ANGIGNLVS--RSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              + +  +   S S++ K+      D  +      ++ + +IL      ++ +   +  
Sbjct: 728 WRVVSDAQNSLESFSLLSKESLKHLNDIRLLDLNKISDDEANILLTTHDTIKSVSHCLDE 787

Query: 408 --QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               ++  ++ +    +       +        + P    T+LY+ +  + +L       
Sbjct: 788 TPYGLNTVISDLTKFTNA----LASSSLPATASSPPS--QTILYIALSSLLRLLA---PI 838

Query: 466 VPKLANKIFDIL 477
            P LA++ ++ L
Sbjct: 839 TPALASECWEHL 850


>gi|59800478|ref|YP_207190.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|293397791|ref|ZP_06641997.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|59717373|gb|AAW88778.1| putative leucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|291611737|gb|EFF40806.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 878

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 487 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 541

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 542 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 597

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 598 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 644

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 645 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 698

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 699 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 755

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 756 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 805

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 806 WPTVDEA 812


>gi|88810475|ref|ZP_01125732.1| valyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792105|gb|EAR23215.1| valyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 919

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 126/390 (32%), Gaps = 75/390 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++ +        ++  ES     LP    ++        L+D  +SR+   W
Sbjct: 348 LEPYLTDQWYVKTETLAGPAIAAVESGRIRFLPESW-SKTYFEWMRNLQDWCISRQ-IWW 405

Query: 217 G--IKIPDD---------------------------PQYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                            + ++  W  +     +T G+   
Sbjct: 406 GHRIPAWYDAEGNVYVGHSEAAVRDKHELGDIALRQDEDVLDTWFSSALWPFSTLGWPQQ 465

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +  + +++P  + V G DI+ F    +         ++P  +           G+K+SK
Sbjct: 466 TEALR-RYYPTSVLVTGFDIIFFWVARMIMLGLRFMGDVPFREVYIHGLVRDADGQKMSK 524

Query: 306 SLGNVIDPIEVIEEV-------------------------------------GVDALRYF 328
           S GNV+DP+++I+ +                                     G DALR+ 
Sbjct: 525 SKGNVLDPLDIIDGIELDALITKRTTGLMQPQLAPMIERATRTHYPSGIVAHGSDALRFT 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
                  G+D  +D+  ++     +  N + N     +        G+          D 
Sbjct: 585 FASLATTGRDIVFDRGRVEG--YRNFCNKLWNAARYVLMNTQGHDAGLEGGAIKLALPDR 642

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST 446
            I+S   R  QEI + +    +  A   +   V +   D Y +  K       +P +   
Sbjct: 643 WIISRLQRAEQEIIDGIHGYRMDHAAQALYEFVWDEYCDWYLELSKATLQHSDDPAQLRG 702

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                V V+  +  L   F+P +  +I+  
Sbjct: 703 TRRTLVRVLETVLRLAHPFIPFITEEIWQR 732



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA++  I D+L R+HR+ G D L+  G D  G       + 
Sbjct: 31  EPYCIMIPPPNVTGTLHMGHAFQDTIMDILIRYHRMQGRDTLWQPGIDHAGIATQMVVER 90

Query: 65  AGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  Q+          L  S D      T +       
Sbjct: 91  QLNAADMTRHDLGRAAFIDRIWQWKAQSGGTITQQLRRLGASVDWQRERFTMDAGLSAAV 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           R ++ ++ D+G IY+G     +        +D EV    +  +      P+
Sbjct: 151 REVFVQLYDEGIIYRGKRLVNWDPVLHTAVSDLEVVAAEEAGHLWHIRYPL 201


>gi|315274506|ref|ZP_07869420.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615865|gb|EFR89079.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 153

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/139 (43%), Positives = 92/139 (66%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+   YI+T I YP+ + HIGHAY  +  D +AR+ RL G DV + TGTDEHGQKI   
Sbjct: 4   EEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDVFYLTGTDEHGQKIQAK 63

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A+  G++ + +VD+ +  F+++   L+IS  DFIRTT+ RH  +   +++++  +GDIY 
Sbjct: 64  AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLVQGDIYL 123

Query: 122 GCYSGWYSLRDEAYYNDDE 140
           G Y GWYS+ DE Y+ + +
Sbjct: 124 GEYEGWYSVSDEEYFTETQ 142


>gi|88603864|ref|YP_504042.1| valyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189326|gb|ABD42323.1| valyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 865

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 135/368 (36%), Gaps = 24/368 (6%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           + W         ++ + +     +        V+W   E  F R+  +  ++   +    
Sbjct: 338 TCWRCKTPIEILSEHQWFVRIPHEAALKAAKEVKWY-PEHMFLRMENWISQMEWDWCISR 396

Query: 185 EFIL----PIERRNEVISFVKSGLKDL-------SLSRKTFDWGIKIPDDPQYIMYVWID 233
           + I     P+    +    +     +L       +  R     G         ++  W+D
Sbjct: 397 QRIFASPIPVWFCKDCGEIILPEESELPVDPTVDAPKRPCPKCGSSNYIPETDVLDTWMD 456

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVF 291
           +  + +  TG+           +PA +   G DI+R  A Y    A  L+   P  + + 
Sbjct: 457 SSISVMHVTGWDGTQKVPPL--FPAQIRPQGHDIIRTWAFYTILRAVSLTGGKPWEQILV 514

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   +   G K+SKS GNV  P E++E+ G D+LR +     A G D  ++ + +     
Sbjct: 515 NGMVLGEDGFKMSKSRGNVTVPEEILEQYGADSLRQWAALGAATGSDIQFNWNDVVAANR 574

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                 + N +SR   M L D             +D  +L+  S+ ++++ E+++     
Sbjct: 575 --FLTKMWN-ISRFALMQL-DRAQYKADAQVTALADRWLLTKLSQTVRDVSESLETYQFD 630

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +AL  +     +   D Y +  K      ++    + V   T   +  +  +L  F P  
Sbjct: 631 KALKAIREFAWDVLADNYIEIVKGRLYSDSDTRDGACVAIRT--SMDAICRMLAPFTPYF 688

Query: 470 ANKIFDIL 477
           A +++  +
Sbjct: 689 AEEVWSFM 696



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 56/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ +  I T   YP  + HIG+A+     D LAR+ R+ G +V+F  G D HG      
Sbjct: 36  SEKPQFVIDTPPPYPTGEFHIGNAFNWCYIDFLARYKRMKGYNVMFPQGWDCHGLPTEVK 95

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                  N R  R     +  S D      T    +    
Sbjct: 96  VEEIHKITKNDVDRQKFREMCRELTIGNIRKMRASMRRMAFSIDWSHEYITMMPEYFGKT 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ + ++   G IY+  +   +  R E      EV  
Sbjct: 156 QLSFLRMYHAGQIYQSDHPVNFCPRCETAIAFAEVNY 192


>gi|260171542|ref|ZP_05757954.1| valyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315919856|ref|ZP_07916096.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693731|gb|EFS30566.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 878

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 128/393 (32%), Gaps = 66/393 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATAEEALAKAKEKTGNAALTIEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 530 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N                IPT      + +           E+ +      +  AL  V
Sbjct: 588 IWNAFRLIKGWTNAKGTIEIPTDAHL--AVQWFDQRLDAAAVEVADLFSKYRLSEALMLV 645

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      + +    +L  LL  F+P +  ++
Sbjct: 646 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMVLSSFERLLELLHPFMPFITEEL 699

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  L   +                M+ + F+P+
Sbjct: 700 WQQLREREPGESL-----------MVTQLFEPV 721



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLFNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|239502322|ref|ZP_04661632.1| valyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 959

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGTDARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|224531644|ref|ZP_03672276.1| valyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511109|gb|EEF81515.1| valyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 875

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 157/414 (37%), Gaps = 48/414 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + + +    + ++ +S K   +K          ++ +    + ++   G  Y +  
Sbjct: 295 ILTQDGKLNKNVPLRYQGLSMKDARFKIEIELM----EKGFLQGVKKHRQQVGHCYRSG- 349

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             V+      +F  +    DK L   E+      P +  N    +  S ++D  +SR+  
Sbjct: 350 EVVEPYLSTQWFVSMKPLADKALKALENGELRFYPKKWENT-YKYWLSNIRDWCISRQLV 408

Query: 215 DWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
            WG +IP                              DP  ++  W  +     ++ G+ 
Sbjct: 409 -WGHRIPAWYNIDTSELVVSDTDPSLDEKNAGKRFVQDPD-VLDTWFSSWLWPFSSLGWP 466

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +        ++P +  +   DI+ F    +       +  +P      +      +G+K+
Sbjct: 467 NVTS-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYITPLLRDKQGKKM 525

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+++I E G D+LR+ L      G+D   D         A  AN + N  S
Sbjct: 526 SKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FGAKFANKVFN-AS 582

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           + + + LK+ + +      F + D+ +L+  +  +  +  +  N   + A   +      
Sbjct: 583 KFILLNLKNREILNDLK--FNDIDKWLLTSLNSTILGVESSFANYKYNEASKFIYEFFWN 640

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+ 
Sbjct: 641 DFCDWYIEISK-IDLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIYS 693



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKKHNTLWLFGTDHAGIATQAVFER 95

Query: 64  --------NAGVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  + +  +               L  SYD      T +       
Sbjct: 96  YLKNIGKSKDDFEREELIQEIFKLKDKHRDVIVKQIKKLGASYDHSRERFTLDDSFCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKNLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|326403977|ref|YP_004284059.1| valyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050839|dbj|BAJ81177.1| valyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 891

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 127/360 (35%), Gaps = 44/360 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  E +F          +   E      +P    N   ++++  ++   +SR+   W
Sbjct: 363 IEPLLTEQWFCNAEVLAGPAIEAVEDGRVQFVPKSWENTYFAWMR-NIEPWCISRQ-LWW 420

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     +T G+
Sbjct: 421 GHRIPAWYAPDGTVFVAETEEAALAEAAEHFGHAVALRQDDDVLDTWFSSALWPFSTLGW 480

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +N      +++P D+ V G DI+ F    +         ++P    + +      +G+K
Sbjct: 481 PENTP-ELDRYYPGDVLVTGFDIIFFWVARMIMMGMYAMGDVPFRTVMINGLVRDERGQK 539

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK+ GNVIDP+ +I++ G DALRY ++ +   G++     + ++   N      + N  
Sbjct: 540 MSKTKGNVIDPLALIDQFGADALRYTVIAQSGAGRNIKLGPNMVEA--NRSFVTKLWN-A 596

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M     D       A       IL   +R + E  E ++   +            
Sbjct: 597 ARFCEMNQCRPDPAFRPETAALPLSRWILDAANRAVLEATEALEGFRLADYAQACYRFTW 656

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D + +  KP  L   + D A  +  V   V+  L  LL   +P +   ++D     
Sbjct: 657 GDFCDWFLELAKP-GLAGED-DAARELRAVAAHVLGLLLRLLHPVIPFVTEALWDEFGYG 714



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 24/174 (13%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG----QKIAKAAQ 63
           +  I  PN     H+GHA  M + DVL R HR++G D L+  GTD  G      + +  Q
Sbjct: 37  TIMIPPPNVTGSLHVGHALTMTLQDVLIRHHRMNGRDALWQPGTDHAGIATQLMVERELQ 96

Query: 64  NAGVTTKV----------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G + +           +  +       +R  R +    D S + F  T ++      R
Sbjct: 97  REGTSRQEIGRDAFLDRVWTWKAEQGGNITRQLRRLGASPDWSRERF--TMDEGLSKAVR 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            ++ ++ + G IY+      +     +  +D EV              PV+  E
Sbjct: 155 TIFVRLFNDGLIYRAKRLVNWDPVFRSAISDLEVEMREVKGNLWHLRYPVEGTE 208


>gi|208780557|ref|ZP_03247896.1| valyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743532|gb|EDZ89837.1| valyl-tRNA synthetase [Francisella novicida FTG]
          Length = 919

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADNIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + + G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLITGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGITLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T ++   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDEGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVADSDEK 213


>gi|119476407|ref|ZP_01616758.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450271|gb|EAW31506.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 921

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 129/393 (32%), Gaps = 79/393 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    E ++          +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 348 IEPYLTEQWYVDAKTLAKPAIKAVENGDIEFIPKQYENMYFSWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQYIMYV---------------------------WIDALTNYLTTTGYLDN 247
           G  I    D +  +YV                           W  +     +T G+ +N
Sbjct: 406 GHRIPAWYDSEGNIYVGRDENEVREKHQLGDLPLQQDNDVLDTWFSSSLWTFSTLGWPEN 465

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
               +    P  + V G DI+ F    +          +P  +           G+K+SK
Sbjct: 466 TPDLRTFH-PTSVLVTGFDIIFFWVARMIMMTLHFKQEIPFNQVYIHGLVRDSDGQKMSK 524

Query: 306 SLGNVIDPIEVIEE-------------------------------------VGVDALRYF 328
           S GNV+DPI++I+                                       G DALR+ 
Sbjct: 525 SKGNVLDPIDLIDGIDLESLVNKRTSGMMQPQMAKKIEKATRKQFPEGIAAYGTDALRFT 584

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTES 386
                + G+D  +D   ++     +  N I N  +R V M  +++D           + +
Sbjct: 585 YYSLASTGRDIKFDMGRIEG--YRNFCNKIWN-AARYVLMNTEEHDCGQDNNNDYQLSLA 641

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  I+S       E+  +++      A   +   +     D Y +  KP     + P   
Sbjct: 642 DRWIISRLQHTESEVALSLEQYRFDLASQALYEFIWNEYCDWYLELSKPVLWDDSAPASL 701

Query: 445 ST-VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   + V+     LL  F+P +  +I+  
Sbjct: 702 KKGTRRTLIRVLETTLRLLHPFMPFITEEIWQR 734



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           E E   I           H+GH ++  I DVL R+HR+ G + L+  GTD  G       
Sbjct: 29  EGEPYSIMIPPPNVTGSLHMGHGFQETIMDVLIRYHRMKGDNTLWQVGTDHAGIATQMVV 88

Query: 60  -----------KAAQNAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                      K         KV+  +       ++  R MA   D S + F  T +   
Sbjct: 89  ERQLEAEGIDRKKLGREKFIEKVWDWKEQSGGTITQQLRRMAASTDWSRERF--TMDPGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ K+ D+G IY+G     +        +D EV    +  +    H P+
Sbjct: 147 SAAVKEVFIKLYDEGLIYRGTRLVNWDPVLHTAVSDLEVVSEEENGFLWHFHYPL 201


>gi|54294236|ref|YP_126651.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|60390669|sp|Q5WWZ8|SYL_LEGPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53754068|emb|CAH15541.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 823

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDSFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N    ++    L  +YD    I T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKREITTCDPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F ++++Y D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITSYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++          G
Sbjct: 207 DSLDEWPAQVKQMQRNWIGKSIG 229



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 63/444 (14%), Positives = 133/444 (29%), Gaps = 45/444 (10%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     + +   + I +D       +         +  +
Sbjct: 330 YGSGAVMAVPAHDQRDWEFAQKYQLPVKQVIKPIGIEHDFNQSAYTEEGILINSNQFDNL 389

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                I         +   +A  N      G   Q Y     P+   E+ G         
Sbjct: 390 LSSKAIQVITNFLEENDAGKATINYRLRDWGVSRQRYWGTPIPMIICEQCGIVPVPDEEL 449

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +L           P+ +  E ++                  G     +       +++
Sbjct: 450 PVVLPENVDFTGTGSPLTQCKEFVNI------------TCPKCGQDATRETD-TFDTFVE 496

Query: 234 ALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSA 282
           +   Y         +     +AK+W P D ++ G +    H +Y   F         +++
Sbjct: 497 SSWYYARFACKGQENAMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNS 556

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  K + + G +L  G K+SKSLGNV+DP  +I   G D  R F++      +   + 
Sbjct: 557 DEPF-KALLTQGMVLKDGHKMSKSLGNVVDPNHLINTYGADTARLFVMFASPPEQSLEWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGAFTESDESILSVCSRV 397
             G++          +     +   M++   D +                +    +  ++
Sbjct: 616 DSGVEGAHR--FLKRVWAFSHQHRDMLIDINDSILSGNGHVDWKEAESRLKKSRHIVHQI 673

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L +   +      +  ++  + L +E+  Y          +T  D+     +     I  
Sbjct: 674 LAQATHDYDRNQFNTVVSGCMKLFNEISDY--------SIETENDK-----FFIHSSISI 720

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  LL    P + + ++  L    
Sbjct: 721 LLRLLAPITPHICHCLWQQLGFDK 744


>gi|284166921|ref|YP_003405200.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016576|gb|ADB62527.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 882

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  ARF R+ G +VL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARFRRMQGDEVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +         +  + +   YD    I T    ++   + L+ +  ++  + +    
Sbjct: 96  NPRDWTFDCIETMTEQMESMGFGYDWEREITTCTPEYYQWNQWLFSRFLEEDLVERRDAE 155

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V   A+         PV+  E E +F +++ Y D+LL   +    
Sbjct: 156 VNWCPHCETVLADEQVEGEAE--LCWRCDTPVEQRELEQWFLKITEYADELLEAIDDLEG 213

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 214 WPNSVRQMQRNWIGRQYG 231



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 67/346 (19%), Positives = 111/346 (32%), Gaps = 48/346 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G            L  + +     L      +  +    
Sbjct: 416 WGISRQRYWGTPIPVIHCEDCGPVTVPEEDLPVELPEFINTTGNPLDAAEEWKQTTCPDC 475

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G      +            D              Y++        D  +A  W P D +
Sbjct: 476 GGPAERET------------DTMDTFVDSSWYFLRYVSPGLEDAPFDLERANDWMPVDQY 523

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y   F         L    P    + + G +  +GEK+SKS GNV+ P
Sbjct: 524 VGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFT-NLLAQGMVQLEGEKMSKSKGNVVSP 582

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++EE G D  R F+++     +D  + ++G  +  NA LA        R   M+    
Sbjct: 583 QRIVEEYGADTARLFMMQAAQPERDFDWSEEG-VRSTNAFLA--------RLKGMVEDYV 633

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                       S   + S     +    +   +   ++AL +   LV  + +Y D  +P
Sbjct: 634 SDEPAGDDDAVAS--YVDSEIDATIALATDEYDDLTFNKALRETQDLVRTLRQYADYTEP 691

Query: 434 WELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILF 478
                            T E  +  +  LL    P LA +++D L 
Sbjct: 692 --------------HAETYERGLSAVVRLLAPVAPHLAEELWDELG 723


>gi|169794910|ref|YP_001712703.1| valyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213157685|ref|YP_002320483.1| valyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482456|ref|YP_002324642.1| valyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301344917|ref|ZP_07225658.1| valyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301595163|ref|ZP_07240171.1| valyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169147837|emb|CAM85700.1| valyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213056845|gb|ACJ41747.1| valyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987761|gb|ACJ58060.1| valyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 959

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQQARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|292669612|ref|ZP_06603038.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648821|gb|EFF66793.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 823

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     I DV+ARF  ++G +VL   G D  G     AA
Sbjct: 30  TKPKYYVLEMFPYPSGKLHMGHVRNYSIGDVIARFRTMEGYNVLHPMGFDSFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  N       L ++Y  D  + T  + ++   +  ++    KG  Y
Sbjct: 90  IQNKVHPAQWTYANIENMERQQRALGLAYDWDREVITCREDYYRWTQWFFELFYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +         +++V  G          + VQ      +FF+++ Y D+LL+  
Sbjct: 150 KKAASVNWCETCGTVLANEQVEDGK----CWRCKSEVQKKNLAQWFFKITDYADELLADL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
              P +   ++   E       GL
Sbjct: 206 AKLPGWPERVKTMQENWIGRSEGL 229



 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 102/284 (35%), Gaps = 29/284 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           L  +            D              Y          D  K  +W P D ++ G 
Sbjct: 479 LHCTCPKCGRDATRETDTMDTFICSSWYYYRYADPHNTERPFDRDKVNYWAPVDQYIGGI 538

Query: 266 DILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y          A +L  + P    + + G ++  G K+SKSLGNV+ P E+I
Sbjct: 539 EHAILHLLYARFFTKVLRDAGMLDFDEPFT-NLLTQGMVIKDGAKMSKSLGNVVSPEEII 597

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           E  G D  R F++      +D  +   G++        N +  ++ +   +I    D   
Sbjct: 598 EHYGADTARLFILFAAPVDRDLDWSDQGVEGAFR--FLNRVWRILLQFEKVIKGASDVYD 655

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
            +  +  E D  +  V    ++++ E++    + + A++ V+ LV+    +         
Sbjct: 656 VSSLSAEEVD--LRRVLHITIRKVTEDVRDRFMFNTAISSVMELVNAFYAF--------- 704

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                        +  E  R L  +L  F P +  ++++ LF  
Sbjct: 705 -----QEKELSPALARETARALLRMLAPFAPHITEELWERLFTG 743


>gi|160887156|ref|ZP_02068159.1| hypothetical protein BACOVA_05172 [Bacteroides ovatus ATCC 8483]
 gi|156107567|gb|EDO09312.1| hypothetical protein BACOVA_05172 [Bacteroides ovatus ATCC 8483]
          Length = 878

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 128/393 (32%), Gaps = 66/393 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATAEEALAKAKEKTGNAALTIEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 530 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N                IPT      + +           E+ +      +  AL  V
Sbjct: 588 IWNAFRLIKGWTNAKGTIEIPTDAHL--AVQWFDQRLDAAAVEVADLFSKYRLSEALMLV 645

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      + +    +L  LL  F+P +  ++
Sbjct: 646 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMVLSSFERLLELLHPFMPFITEEL 699

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  L   +                M+ + F+P+
Sbjct: 700 WQQLREREPGESL-----------MVTQLFEPV 721



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
            N                       + D++          L  S D      T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTDEHGGIILKQLRKLGASCDWNRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLFNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|330873099|gb|EGH07248.1| valyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 948

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 122/403 (30%), Gaps = 89/403 (22%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++    + ++       +  ++  E      +P +  N   S+++  ++D  +SR+  
Sbjct: 369 TIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRD-IQDWCISRQ-L 426

Query: 215 DWG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGY 244
            WG  I    D                               ++  W  +     +T G+
Sbjct: 427 WWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPEIALQQDNDVLDTWFSSGLWTFSTLGW 486

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
            +     +      D+ V G DI+ F         L           +P           
Sbjct: 487 PEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTLHLVKNEDGTPQVPFKTVYVHGLVR 545

Query: 297 LHKGEKISKSLGNVIDPIEVIE-------------------------------------E 319
             +G+K+SKS GNV+DP+++++                                      
Sbjct: 546 DGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIAS 605

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N     +    K  D     
Sbjct: 606 YGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAARYVLD---KGEDCGQNG 660

Query: 380 PG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
                + +D  I+S   R   E+   +       A   +   +     D Y +  KP  L
Sbjct: 661 EAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKP-VL 719

Query: 437 KKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +R        V V+     L   F+P +  +I+  L
Sbjct: 720 WDETAQVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 762



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
           +  I  PN     H+GH +   I D L RF R+ G + L+  GTD  G       +    
Sbjct: 34  TIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLE 93

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           K++  +       SR  R +   +D S + F  T +    D  +
Sbjct: 94  AQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERF--TMDDGLSDAVK 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ + G IY+G     +  +     +D EV    +  +      P+
Sbjct: 152 EAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPL 201


>gi|294841563|ref|ZP_06786246.1| valyl-tRNA synthetase [Acinetobacter sp. 6014059]
 gi|322509226|gb|ADX04680.1| valS [Acinetobacter baumannii 1656-2]
 gi|323519255|gb|ADX93636.1| valyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 959

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQEARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|184159315|ref|YP_001847654.1| valyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|183210909|gb|ACC58307.1| Valyl-tRNA synthetase [Acinetobacter baumannii ACICU]
          Length = 959

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQEARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|299148648|ref|ZP_07041710.1| valine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298513409|gb|EFI37296.1| valine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 878

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 128/393 (32%), Gaps = 66/393 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATAEEALAKAKEKTGNAALTIEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 530 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N                IPT      + +           E+ +      +  AL  V
Sbjct: 588 IWNAFRLIKGWTNAKGTIEIPTDAHL--AVQWFDQRLDAAAVEVADLFSKYRLSEALMLV 645

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      + +    +L  LL  F+P +  ++
Sbjct: 646 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMVLSSFERLLELLHPFMPFITEEL 699

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  L   +                M+ + F+P+
Sbjct: 700 WQQLREREPGESL-----------MVTQLFEPV 721



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLFNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|240124703|ref|ZP_04737589.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268683278|ref|ZP_06150140.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268623562|gb|EEZ55962.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 945

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVAEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|240113933|ref|ZP_04728423.1| valyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268599997|ref|ZP_06134164.1| valyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584128|gb|EEZ48804.1| valyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 945

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|169632586|ref|YP_001706322.1| valyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169151378|emb|CAP00102.1| valyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 959

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADIELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGTDARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLSLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|300690442|ref|YP_003751437.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
 gi|299077502|emb|CBJ50128.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
          Length = 877

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 6/211 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCNPDYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+ R++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLRITDYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +           +   I   +        S
Sbjct: 212 LDPLGWPERVKLMQQNWIGKSEGVRFAFPHS 242



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 116/362 (32%), Gaps = 50/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    +D  +        G   +      +   +++   Y+ R +      +     + 
Sbjct: 479 SGNPLAKDPRFLECTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDAATMVD-GRND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTKLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            +   G K    P D+ V   D             + A L    +    G +    EK+S
Sbjct: 592 REEATGKKQWINPVDVDVQTDD---------RGRPIGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWSDAGVE---------GASRFLRR 689

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             +  +   + +    G       T++D ++      VL++   + +    +  ++  + 
Sbjct: 690 VWNFGVAHAEPIRAGHGNGVVNGATDADRALRRELHTVLKQANYDYERLQYNTVVSAAMK 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++ +          E  K     A        E    L  +L   VP + + ++  L  
Sbjct: 750 MLNAL----------EGAKDAGADAR------REGFGILLRVLYPVVPHITHVLWQELGY 793

Query: 480 AD 481
           A 
Sbjct: 794 AG 795


>gi|219872032|ref|YP_002476407.1| valyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219692236|gb|ACL33459.1| valyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 899

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 324 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 381

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 382 WGHRIPAWYDAEGNVYVARDEAEVRSKYQLNADVALKQDEDVLDTWFSSGLWTFSTLGWS 441

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 442 EQTKELKMYH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 500

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 501 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAPH 560

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 561 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 615

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E R+ +       A   +         D Y +  KP     
Sbjct: 616 VEYSLADRWIQSTFNRTVGEFRDALSQYRFDLAANTIYEFTWNQFCDWYLELTKPVFANG 675

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 676 TDAQKRGA-SQTLVRVLEKLLRLAHPIIPFITEEIWQ 711



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 23/157 (14%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT------------ 69
           +GHA++  + D L RF+R++G + L+  GTD  G       +                  
Sbjct: 1   MGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGREA 60

Query: 70  ---KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              K++  +       S+  R + + +D   + F  T ++   +  + ++ ++ ++G IY
Sbjct: 61  FINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLSNAVKEVFVRLHEEGLIY 118

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +G     +  +     +D EV              P+
Sbjct: 119 RGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 155


>gi|194334514|ref|YP_002016374.1| isoleucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312332|gb|ACF46727.1| isoleucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 1080

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 118/298 (39%), Gaps = 12/298 (4%)

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +  L    + R  F    K  +    ++ VW D+ +       Y         K +PAD 
Sbjct: 519 ELDLHKPFVDRIYFVRDGKRYNRTPELIDVWFDSGSMPFAQLHYPFENKELFDKTFPADF 578

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G D     F+ ++  A L+         V +   +  +G K+SKS GNV+DP E I 
Sbjct: 579 IAEGVDQTRGWFYTLHAIATLIFDKPAYRNLVVNGHILDKEGLKMSKSKGNVVDPFETIN 638

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDG 375
             G DALR++L+      +   ++ + +++           N  +  V     D   +DG
Sbjct: 639 RYGADALRWYLIVTSPPWRPKSFNVEEIEEEQRR-FFRAYVNSYNFFVMYANVDGFCFDG 697

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQ 431
            +      +E D+ I+S  + ++  +   MQ   +  AL  +      +  + Y     +
Sbjct: 698 DVVPVRQRSELDQWIMSSLNSLVSGVEMRMQQYDMTGALRLINDFTVDNLSNWYIRRSRK 757

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           + W+     PD+ +       + +  L++LL  F P +A+ ++  L        ++S+
Sbjct: 758 RFWK-GDMGPDKVAA-YQSLYQCLETLSMLLAPFTPFIADWMYRSLNSVSGREPWESV 813



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 23/157 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-----NAGV 67
               N +P + H +   I DV+ RF  + G  V    G D HG  +  A +         
Sbjct: 49  PPTVNGKPGVHHVFSRTIKDVVCRFKSMQGYKVPRKAGWDTHGLPVEIAVEKKLGLKNKA 108

Query: 68  TTKVF----------------VDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
             + +                +D N   +  + + +   +  DD   T    + ++    
Sbjct: 109 QVEEYGAGEFNAEAKALVYHHIDDNREGWGKLTEEMGYWVDMDDPYITCTNNYIESVWWA 168

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            K I DKG IYK         + E   +  E+  G  
Sbjct: 169 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGYK 205


>gi|59802127|ref|YP_208839.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|194099950|ref|YP_002003089.1| valyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|240017512|ref|ZP_04724052.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240116666|ref|ZP_04730728.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|254494687|ref|ZP_05107858.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268602334|ref|ZP_06136501.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|81311152|sp|Q5F5W0|SYV_NEIG1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|59719022|gb|AAW90427.1| putative valyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|193935240|gb|ACF31064.1| valyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|226513727|gb|EEH63072.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268586465|gb|EEZ51141.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|325135101|gb|EGC57728.1| valyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDETGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S +     D Y +  K  +L+     R     +
Sbjct: 680 DRLNQTIEQVTQAYETYRFDLAAETLYSFMWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|237721424|ref|ZP_04551905.1| valyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229449220|gb|EEO55011.1| valyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 878

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 128/393 (32%), Gaps = 66/393 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATAEEALAKAKEKTGNAALTIEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 530 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 587

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N                IPT      + +           E+ +      +  AL  V
Sbjct: 588 IWNAFRLIKGWTNAKGTIEIPTDAHL--AVQWFDQRLDAAAVEVADLFSKYRLSEALMLV 645

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      + +    +L  LL  F+P +  ++
Sbjct: 646 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMVLSSFERLLELLHPFMPFITEEL 699

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           +  L   +                M+ + F+P+
Sbjct: 700 WQQLREREPGESL-----------MVTQLFEPV 721



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWDWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLFNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +NE +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNEWLKGKK 245


>gi|251792950|ref|YP_003007676.1| valyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534343|gb|ACS97589.1| valyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 954

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 132/415 (31%), Gaps = 90/415 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N +       ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGKIQFVPKQYEN-LYFSWMHDIQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEAEVRSKYNLNSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSQG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R  +           +         D Y +  KP     
Sbjct: 671 IEFSVADRWIQSEFNRTVETFRSALSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSL 489
            +  +        V V+ +L  L    +P +  +I+      + +  ++   QS 
Sbjct: 730 GSAAQIRAASQTLVHVLEKLLRLAHPLMPFITEEIWQKVKGFMGITADSIMLQSF 784



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T +    
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|238927894|ref|ZP_04659654.1| isoleucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884227|gb|EEQ47865.1| isoleucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 1049

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 62/446 (13%), Positives = 130/446 (29%), Gaps = 16/446 (3%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
               ++ F    +E G+              VFV        D  +     +     T  
Sbjct: 344 CRKYNMPFVQFVNEKGEMTE-----ETDWPGVFVKNADPLILDDLEKSGKLFKAPEFTHS 398

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
             H   C       +      +        + +    N      G        +H  VQ 
Sbjct: 399 YPHCWRCDTPLIYYARASWFIRMTAVRDALVANNKTVNWIPPSIGEGRFGNWIEH--VQD 456

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
                  +  +       S    H    +   R  +        L      +++    + 
Sbjct: 457 WGISRNRYWGTPLNIWKCSCGHEHAVGSIAELRELQPNCPADIELHRPYIDAITFPCPEC 516

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G  +   P+ ++  W D+ +       Y         K++PAD      D     F+++ 
Sbjct: 517 GETMHRVPE-VIDCWFDSGSMPFAQWHYPFENKELFEKYFPADFISEAVDQTRGWFYSLI 575

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + LL    P    +         G+K+SKS GN +DP++ +   G DA+R++     A
Sbjct: 576 AISTLLFDKSPYRNVIVLGHVQDKDGQKMSKSKGNAVDPMDALGRHGADAIRWYFYENSA 635

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILS 392
                 +  D +++     +           +   + ++D           +  D  +LS
Sbjct: 636 PWLPNRFHDDAVQEGARKFMGTLWNTYAFYVLYANIDEFDPTKHTLDYDQLSVMDRWVLS 695

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVT 451
             + +++ + + + +  +  A   + S V E+ + Y    +     K             
Sbjct: 696 RLNTMVRTVDDCLGHYRVTEAAKALQSFVEELSNWYVRRCRSRFWAKGMEQDKENAYLTL 755

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +          VP +   I+  L
Sbjct: 756 YTALVTTVKAAAPMVPFITESIYRNL 781



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D+L R+  + G  VL   G D HG  +    + A       
Sbjct: 57  PPTANGRPHIGHVLTRVIKDMLPRYQSMKGRKVLRKAGWDTHGLPVELEVEKAIGINGKE 116

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKI 113
                         +  V +    +   +DV+    D      T E    ++     K+I
Sbjct: 117 QIEEYGIEPFIKKCRESVWKYKSMWEQFSDVVGFWADMEHPYITYENDFIESEWWALKEI 176

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             KG +Y+G     Y  R     +  EV +G  
Sbjct: 177 WKKGLLYQGHKIVPYCPRCGTPLSSHEVAQGYK 209


>gi|213161212|ref|ZP_03346922.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
          Length = 813

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 432 GHRIPAWYDNDGNVYVGRTEDEVRQENNLGADVQLRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQMAEKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEEQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + N     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKP-VMTG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +        +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GSESELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 GLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|254372192|ref|ZP_04987684.1| valyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151569922|gb|EDN35576.1| valyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 919

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDVTIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T ++   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDEGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFIYPVADSDEK 213


>gi|158422191|ref|YP_001523483.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048039|sp|A8IMK0|SYL_AZOC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158329080|dbj|BAF86565.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 874

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K ++     YP+ + HIGH    ++ DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 33  RPKFFVMEMFPYPSGRIHIGHGRNYVMGDVLARYKRMQGFNVLHPMGWDSFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K +  +N  + ++   +L +S D    + T +  ++   + L+  + +    Y+
Sbjct: 93  ERGIHPKSWTYENIASMKEQLQLLGLSLDWNREVATCDPSYYAEQQRLFLDLFENDLAYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  +   +FFR++A+  +LL   +
Sbjct: 153 KESEVNWDPVDNTVLANEQVIDG----RGWRSGAVVERRKLNQWFFRITAFAQELLDAID 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +            GL+ L
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGLEVL 234



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/415 (14%), Positives = 124/415 (29%), Gaps = 81/415 (19%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G            L    +      P++R          
Sbjct: 435 WGISRQRYWGCPIPIIHCDSCGPVAVPREQLPVELPDDVTFDRPGNPLDRAKA------- 487

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFW-PAD 259
                         G     +    M  ++D+   +L       +    K   + W P D
Sbjct: 488 -----WRDVPCPKCGAPARRETD-TMDTFVDSSWYFLRYASDNPDKPLDKDAVRHWLPVD 541

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKG------- 300
            ++ G +    H +Y   F  +                  + +  H     K        
Sbjct: 542 QYIGGIEHAILHLLYSRFFTRALKACGRVDVAEPFAGLFTQGMIVHETYKDKDGRWLFPE 601

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS  NV+ P  V++  GVDA R+F++ +    
Sbjct: 602 EVKLLGDGKAEKLDDGSPVTVGPPEKMSKSKKNVVPPEVVVDTYGVDAGRWFMLSDTPPE 661

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILS 392
           +D  + + G++         G    V R    + +  +   P     P +F  +  ++  
Sbjct: 662 RDSEWTQSGIE---------GAWRFVQRVWRQVQEAIELGAPKGADKPASFDAAATALRR 712

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +  ++ ++++    + A+A V       + +  A          P   +   +   
Sbjct: 713 AAHGLAHQVADDVERLRFNVAVAHVHEF---ANAFGQAIASARTASPVPADLA---FALR 766

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
           E    +  ++   VP LA + +  L    +    ++   + +P  ++  T   PI
Sbjct: 767 EAAEIVTRVVGPMVPHLAEECWAALGY--DTLLAEAAWPKAEPELLVENTITLPI 819


>gi|76800957|ref|YP_325965.1| isoleucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|84029523|sp|Q3ITY7|SYI_NATPD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76556822|emb|CAI48396.1| isoleucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 1061

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 74/410 (18%), Positives = 139/410 (33%), Gaps = 39/410 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D G  ++        + D+ +    ++          ++  P +  +        S  +
Sbjct: 394 HDYGHCWRCDTPIIQMVTDQWFITVTDIKDELLANMEESEWFPQEARDNR----FRSFIE 449

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-------- 225
           +           + +PI                +  +R+     +    DP+        
Sbjct: 450 ESPDWNVSRQRYWGIPIPIWTPDDWSGDVEEAIVVSTREELAERVDQDIDPESVDLHKDT 509

Query: 226 -----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                             +  VW+D+      T GY  N D    + WPADL +   D  
Sbjct: 510 VDDLTITADGTTYTRVPDVFDVWLDSSVASWGTLGYPGNED-DFEELWPADLIMEAHDQT 568

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F +            P    +     +   G K+SKS+GN++ P E I+  G D +R
Sbjct: 569 RGWFWSQLGMGSAALGEAPYETVLMHGWALAEDGRKMSKSIGNIVAPQEAIDRHGADPMR 628

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIP--TPGAF 383
            FL+ +   G D  +  D ++ R      N + N+    +  M L D+D         A 
Sbjct: 629 LFLLTQNPQGDDMRFSWDEMENRQRD--LNILWNVFRFPLPYMRLDDFDPDAVALDEAAL 686

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKPWELKKTNP 441
              DE +LS  S V  E+ ++ +N    +AL ++++ + E V R Y    +    ++   
Sbjct: 687 ETVDEWVLSRLSTVTAEMTDHWENFRQDKALDELLAFIVEDVSRFYIQVVRERMWEEETS 746

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +           V+ +   LL  + P +A +I+  L     +      D 
Sbjct: 747 ESKLAAYATLHHVLVETTKLLAPYAPFVAEEIYGTLTGDGGHETVHMADW 796



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  +      Y +   H+G  +   + D   R+HR+ G +V    G D HG  I    
Sbjct: 39  DGEDFFFVDGPPYTSGSAHMGTTWNKTLKDAYIRYHRMRGYNVTDRPGYDMHGLPIETKV 98

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F ++     ++      +   +DD  +T +  + 
Sbjct: 99  EERLGFDNKKDIEEFGEQNFIDECKSFAEEQLEGLQEDFKSFGVWMDWDDPYKTVDPEYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           +     + K  D+  + +G  S     R E    ++EV    
Sbjct: 159 EAAWWGFSKAHDRDLVEQGQRSISQCPRCETAIANNEVEYDH 200


>gi|120553891|ref|YP_958242.1| valyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323740|gb|ABM18055.1| valyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 950

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 128/400 (32%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 372 IEPMLTDQWFADAKTLAKPAIEAVEDGRIQFVPKQYENMYFAWMRD-IQDWCISRQ-LWW 429

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 430 GHRIPAWYDAEGNIYVGRSEAEVRSKHQLPDTLELKQDDDVLDTWFSSALWTFGTLGWPE 489

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 490 ITERLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGTPQVPFHTVYVTGLIRDE 548

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 549 HGDKMSKSKGNVIDPLDMIDGISLPDLLEKRTGNLMQPKLAEKIGKRTEKEFPEGIAAHG 608

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L      G+D  +D   L+     +  N + N  +R V M  +  D  +   P
Sbjct: 609 TDALRFTLAAMATTGRDINWDMKRLEG--YRNFCNKLWN-AARYVLMNTEGEDCGVNNEP 665

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S      QE+  ++       A   +   +     D Y +  KP     
Sbjct: 666 VELSLADRWIISELQHCEQEVIRHLDQYRFDLAAYALYEFIWNEYCDWYLELSKPALSDD 725

Query: 439 TNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +    A        V V+  +  L    +P +  +I+  +
Sbjct: 726 SASAEAKRGTRRTLVRVLEAVLRLAHPIMPFITEEIWQRI 765



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 25/169 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           AI  PN     H+GHA++  I D L RF R+ G + L+T GTD  G       +      
Sbjct: 36  AIPPPNVTGSLHMGHAFQHTIMDTLTRFKRMQGRNALWTVGTDHAGIATQMVVERKLAAE 95

Query: 70  KVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           +                           +R  R + + +D S + F  T +   +   + 
Sbjct: 96  EDKTRHDLGREEFIKRIWDWKEHSGGTITRQMRRLGNSVDWSNERF--TMDDGFYKAVQE 153

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ ++ D+G +Y+G     +  +     +D EV    +  Y+     P+
Sbjct: 154 VFIRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEEKGYFWHLRYPL 202


>gi|253563620|ref|ZP_04841077.1| valyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251947396|gb|EES87678.1| valyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 876

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 120/364 (32%), Gaps = 55/364 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       L           P + +N         +KD  +SR+   W
Sbjct: 350 IEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 407

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 408 GHRIPAYFLPEGGYVVAVTDEEALKLAREKTGNPNLKMTDLRQDEDCLDTWFSSWLWPIS 467

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 468 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 527

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 528 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 585

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N          ++  G I  P     + +           E+ +      +  AL  +
Sbjct: 586 IWNAFRLVKGW--ENGMGTIDIPADAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALMLI 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      +T+    +L  +L  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMTLSAFERLLAMLHPFMPFITEEL 697

Query: 474 FDIL 477
           +  L
Sbjct: 698 WQQL 701



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLSRDEFLKHAWAWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|167564099|ref|ZP_02357015.1| leucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571241|ref|ZP_02364115.1| leucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 864

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ER+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  TERKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSREVTTCKPDYYRWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G++         G   
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASR 673

Query: 361 LVSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R       + D              E+D+++      VL++   + Q    +  ++ 
Sbjct: 674 FLRRVWGFGHANGDALAARATFDVAQLGEADKTLRREIHGVLKQADFDYQRLQYNTVVSA 733

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                   S    V  E    L  +L   VP +  +++  
Sbjct: 734 AMKMLNALD----------------AAKSATPAVLRETYGVLLRVLYPVVPHVTFELWKA 777

Query: 477 LFVADE 482
           L  ADE
Sbjct: 778 LGYADE 783


>gi|326202019|ref|ZP_08191889.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987814|gb|EGD48640.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 929

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 112/308 (36%), Gaps = 23/308 (7%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G         IM VW D+ ++++            +   WPADL++ G D     F
Sbjct: 516 KCGCGHDEFSKETDIMDVWFDSGSSHVAVLE------NREGLSWPADLYLEGSDQHRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P  K +     I  +  K+SKSLGN IDP +VI+E G D LR ++ 
Sbjct: 570 QSSLLTSVATRKGAPYKKVLTHGYVIDEEKRKMSKSLGNGIDPADVIKEYGADILRLWVA 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    KD LK+   +++   I N     +  I   + D         +E D  
Sbjct: 630 SSDYTT-DIKISKDLLKQL--SEVYRKIRNTARYILGNINGFNPDTDSVDYSELSELDRW 686

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAST 446
            L   + +++++ E       H     + +   V   + Y D  K      K +      
Sbjct: 687 ALYKMTNLIKKVNEAYSGYEFHMMFHAIHNFCVVDMSNFYLDIIKDRLYTSKPDSKERRA 746

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG-------FML 499
              V  E+++ L  +L   +     +I+  +    E+   +S+     P          L
Sbjct: 747 AQTVMYEILQSLVRMLTPVLAFTTEEIWQYMPHRAED-DIESIQLNSWPQVNEMYLDTQL 805

Query: 500 HKTFDPIF 507
            + ++ IF
Sbjct: 806 AEKWEKIF 813



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+G +   I+ D++ ++  + G    +  G D HG  I + 
Sbjct: 47  EGKPSFILHDGPPYANGGIHLGTSLNKILKDIVVKYKSMSGYYTPYVPGWDTHGLPIEQR 106

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTC 106
           A                    + F  +     R+    L +  D      T +       
Sbjct: 107 AIKELGLKRHEVGPVVFREACEGFAMKYLDIQRESFKRLGVRADWEHPYVTLKPEFEAKQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    D
Sbjct: 167 IEVFGEMAKKGHIYKGLKPVYWCPECETALAEAEIEYADD 206


>gi|241206933|ref|YP_002978029.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860823|gb|ACS58490.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 876

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIGSMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFVDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLTIRW 235



 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 115/385 (29%), Gaps = 73/385 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G      A     L    +  +   P++R          
Sbjct: 434 WGISRQRYWGCPIPVIHCDDCGVVPVPKADLPVKLPDDVTFDQPGNPLDRHPTW------ 487

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                 +S        +   D            T +            +  ++ P D ++
Sbjct: 488 ----RHVSCPNCGKDARRETDTMDTFVDSSWYFTRFTAPWEERPTDPEAANRWLPVDQYI 543

Query: 263 IGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKG--------------- 300
            G +    H +Y              A     K +F+ G ++H+                
Sbjct: 544 GGIEHAILHLLYSRFFTRAMRETGHVAATEPFKGLFTQGMVVHETYSRSAGASREWVAPA 603

Query: 301 ---------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                      EK+SKS  NV+DP ++I   G D  R+F++ + 
Sbjct: 604 DIRIDELDGKRRAFLLTSGEEVAIGSIEKMSKSKKNVVDPDDIIASYGADTARFFVLSDS 663

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  + + G++       A+     + R +S        + P P A  E+   I   
Sbjct: 664 PPERDVIWSEAGVEG------AHRFTQRLWRLISEAADALSAVAPAPAADGEA-LPISQA 716

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + L+ +  +      ++A+A++  LV+ +        P          A T      +
Sbjct: 717 AHKTLKAVENDYDKLWFNKAVARIYELVNAL------AAPMTRVAAGEGNA-TYRAAVRD 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
               L  L+    P LA + +  L 
Sbjct: 770 AAEILIQLVSPMTPHLAEECWAALG 794


>gi|53712342|ref|YP_098334.1| valyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60680513|ref|YP_210657.1| valyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|265762535|ref|ZP_06091103.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81316418|sp|Q5LGN1|SYV_BACFN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81825070|sp|Q64XH6|SYV_BACFR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52215207|dbj|BAD47800.1| valyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60491947|emb|CAH06707.1| putative valyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|263255143|gb|EEZ26489.1| valyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301162050|emb|CBW21594.1| putative valyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 876

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 120/364 (32%), Gaps = 55/364 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       L           P + +N         +KD  +SR+   W
Sbjct: 350 IEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 407

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 408 GHRIPAYFLPEGGYVVAVTDEEALKLAREKTGNPNLKMTDLRQDEDCLDTWFSSWLWPIS 467

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 468 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 527

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 528 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 585

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N          ++  G I  P     + +           E+ +      +  AL  +
Sbjct: 586 IWNAFRLVKGW--ENGMGTIDIPADAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALMLI 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      +T+    +L  +L  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMTLSAFERLLAMLHPFMPFITEEL 697

Query: 474 FDIL 477
           +  L
Sbjct: 698 WQQL 701



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLSRDEFLKHAWAWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|110668247|ref|YP_658058.1| leucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109625994|emb|CAJ52439.1| leucine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 907

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ R+ G DVL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMRGDDVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        R+  + +   Y  D  I T +  ++   +  +++  + G + +    
Sbjct: 96  NPRDWTYDCIETMREQMESMGFGYDWDREITTCDPEYYQWNQYFFREFYNSGIVERRDAD 155

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V   A+          V+  E   +F +++ + D+L+   +    
Sbjct: 156 VNWCPSCETVLADEQVEGEAE--LCWRCDTAVEQRELAQWFLKITEWADELVDDIDRLEG 213

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 214 WPNNVTQMQRNWIGRQYG 231



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 62/390 (15%), Positives = 116/390 (29%), Gaps = 52/390 (13%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +  +    K       +  D  Y   D    G   Q Y     PV + EE G     
Sbjct: 388 YTGLDSETAREKITADTTGAELDTQYRLRD---WGISRQRYWGTPIPVVYCEECGPVLVP 444

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                  L  + +     L      +  +  + G      +            D      
Sbjct: 445 EKDLPVELPPFINTTGNPLEAATDWKETNCPECGAAATRET------------DTMDTFV 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS------- 281
                   Y++     +  D  +   W P D +V G +    H +Y   F          
Sbjct: 493 DSSWYFLRYVSPDIETEPFDIERTNQWMPVDQYVGGIEHAVMHLLYSRFFTKVLAENDDL 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A     + + + G +   GEK+SKS GN + P  ++EE G D  R F+++     +D  +
Sbjct: 553 AVTEPFENLLAQGMVQLDGEKMSKSKGNTVSPQRIVEEYGADTARLFMMQAAQPERDFDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVS-----RSVSMILKDYDGMIPTP---------GAFTESD 387
            ++G+  R    L   +  L            +L+++D +   P            T   
Sbjct: 613 SEEGV--RSTNQLLTQLIELADVIADINVDRAVLENHDAVTQPPISNTETTLTNERTPIA 670

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             + +     +    +         AL +   LV  + +Y +   P              
Sbjct: 671 SYVDTEIDAAVAIATQEYDELSFSVALREARDLVQTLRQYRNYTTPHV------------ 718

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +  +  LL    P +  +++  L
Sbjct: 719 -DTYRHGLETVIRLLAPVAPHITEELYSAL 747


>gi|312148470|gb|ADQ31129.1| valyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 875

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFV--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFAEKEDILAL 704



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|315045129|ref|XP_003171940.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311344283|gb|EFR03486.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 946

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 4/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+   H+GH     I+DVLARF ++ G DVL   G D  G     A
Sbjct: 74  SSKEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENA 133

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  QN  N RD    L I   +D  + T     +   + L+  + +KG  
Sbjct: 134 AIERGIHPEGWTKQNIANMRDQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLA 193

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+  E + +FFR++++++ LL  
Sbjct: 194 YQAEAVVNYDPIDKTVLANEQV-VDANGCSWRSGAK-VEKRELKQWFFRITSFKEALLKD 251

Query: 180 Y 180
            
Sbjct: 252 L 252



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 28/189 (14%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +        EK+SKS  N +DP   I   G DA R  ++      +   +D+  +     
Sbjct: 666 TQIPANISFEKMSKSKYNGVDPNTCIASYGADATRAHVLFSAPVSEVLEWDETKII---- 721

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                GI    SR                 A +E++ +IL +    +  +   ++     
Sbjct: 722 -----GIQRWFSRIWK--------------ALSENESNILLMTHNTISSVSYCLEKNQYG 762

Query: 412 RALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPK 468
             L  VI  L+   +    A  P E  K++P   S           +  L  +L    P 
Sbjct: 763 --LNTVISDLIKLTNAIAAAPLPAEPSKSSPPAQSFTQSHATLYIALNSLLRMLAPIAPA 820

Query: 469 LANKIFDIL 477
            A++ +++L
Sbjct: 821 FASECWEVL 829


>gi|91762511|ref|ZP_01264476.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718313|gb|EAS84963.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 844

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K Y      YP+ + H+GH     I DVLAR+  L G +VL   G D  G     A
Sbjct: 29  KTRKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKMLQGYNVLHPMGWDSFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +  K + + N +  R     L   I +D  I T  + ++   +  +  + DKG +
Sbjct: 89  ARQNNLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDYYKHQQEFFLDLYDKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   DE    +++V  G            V+  +   +FF +S + + LL  
Sbjct: 149 YRKENYVNWDPVDETVLANEQVVDGKG----WRSGAIVERKKLNQWFFNISKFSEDLLQG 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 205 LDALENWPNKVKVMQKNWIGKSFG 228



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 51/381 (13%), Positives = 117/381 (30%), Gaps = 81/381 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E +             L   E       P++  +    F+  
Sbjct: 422 WGISRQRYWGCPIPIAYDENDQPIKIPRDMLPVKLPEIEKLSNTGNPLDSEDNWKFFILD 481

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G K    +     +        ++     +D          ++           P D ++
Sbjct: 482 GKKYRRETDTLDTFVDSSWYFLRFCSPHNLDRGFTQEEANYWM-----------PVDQYI 530

Query: 263 IGKDILRFHAIYWPAFLLSANLP-------------LPKKVFSHGFILHKGEK------- 302
            G +    H +Y   F+ + +                 + +  H     +  K       
Sbjct: 531 GGVEHAILHLLYSRFFMQALSYKNDDFKLKEPFDGLFTQGMVCHETYKDQNNKWLSPEEV 590

Query: 303 -------------------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                                    +SKS  N IDP  +I+  G D++R F++ +    K
Sbjct: 591 SSENGKEFYKKDNPSEKIIVGPTESMSKSKKNTIDPENIIKNYGADSVRLFILSDSPPEK 650

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +   G+           +  L S+ +  I  +                 +    +++
Sbjct: 651 DVQWSDQGMLASF--KFVQKLWTLNSKILDKIKNN---------DQGSEGNDLTKFTNQL 699

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + +I +N++    +  +A    + + + +  D  KP  +KK           + +E  ++
Sbjct: 700 INKITQNLEKFHYNVIVANFYEMYNFLIKEID--KP--IKKE----------ILIENYKK 745

Query: 458 LAILLQAFVPKLANKIFDILF 478
           + I++  F+P  +N+  + + 
Sbjct: 746 ILIVMNPFIPHFSNECLNTIN 766


>gi|240124425|ref|ZP_04737381.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268683054|ref|ZP_06149916.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268623338|gb|EEZ55738.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|240118888|ref|ZP_04732950.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268604597|ref|ZP_06138764.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268588728|gb|EEZ53404.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|239997959|ref|ZP_04717883.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268593808|ref|ZP_06127975.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547197|gb|EEZ42615.1| valyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317165402|gb|ADV08943.1| valyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVAEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|126724364|ref|ZP_01740207.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126705528|gb|EBA04618.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 865

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 50  SDKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKMSTGHNVLHPMGWDAFGMPAENA 109

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K +   N    +D    L +S D      T +  ++   + L+  +  K  +
Sbjct: 110 AMAIGGHPKEWTYNNIAVMKDQMKPLGLSIDWSREFATCDPEYYGQQQALFIDMLAKELV 169

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G           PV+  E   +FF++S    +LLS 
Sbjct: 170 YRKNAVVNWDPVDMTVLANEQVIDGKG----WRSDAPVERRELTQWFFKISDMSGELLSA 225

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   +            G+
Sbjct: 226 LDDLENWPAKVRLMQANWIGKSRGI 250



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 129/403 (32%), Gaps = 57/403 (14%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-- 155
           T +   D     ++         K     W   R   +     V    D      +    
Sbjct: 416 TSQEGIDATIDYFEANDLGVGQTKYRLRDWGLSRQRYWGCPIPVVHCDDCGVVPEKKENL 475

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++  ++  +    +           + P    P +R  E  +           +R T  
Sbjct: 476 PIELPDDVSFDIPGNPLDRHPTWRDCNCPSCGKPAQR--ETDTMDTFVDSSWYFARFTAP 533

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
                 D  +   ++ +D     +             A+   A  H+       F A++ 
Sbjct: 534 RAKTPTDLDEAAYWMNVDQYIGGIEHAILHLLYSRFFARAMRATGHLPQGTEEPFDALFT 593

Query: 276 PAFLLSANL-----------PLPKKVFSHGFILHKGE--------KISKSLGNVIDPIEV 316
              +                 LP+ V S G +   GE        K+SKS  NV+DPI +
Sbjct: 594 QGMVTHEIYQTRDEKGRPVYHLPEDV-SDGKVTATGETLEIIPSAKMSKSKKNVVDPISI 652

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE  G D  R+F++ +    +D  +   G +              +SR + +  +     
Sbjct: 653 IESYGADTARWFVLSDSPPERDVEWTAAGAEATF---------KHLSRVLRISTE----- 698

Query: 377 IPTPGAFTESDESILSVC-SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
               G  T SD+  L+    R + ++   +++   + ++A++    +             
Sbjct: 699 -IAEGKDTGSDDLALARLTHRAVHDVTMGVESFGFNASIAKLYGFTNA------------ 745

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L K+    A+       E +R LA L+    P LA +I+ +L 
Sbjct: 746 LAKSKATAAARA-----ESMRTLAQLMAPITPHLAEEIWSMLG 783


>gi|75674290|ref|YP_316711.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|123773340|sp|Q3SWI2|SYL_NITWN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74419160|gb|ABA03359.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 883

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYMRARGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  K +   N +  +     + +S D    I T +  ++   + ++      G   +
Sbjct: 93  ERKIAPKAWTYDNIKAMKKQLRSIGLSLDWSREIATCDPAYYKHQQKMFLDFLRAGLAER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ +  +LL    
Sbjct: 153 EKRKINWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITKFSQELLDALG 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +            GL
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 10/178 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G++    A     +  
Sbjct: 629 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQGA--ARFMQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ +              P  F     ++       L  +   ++    +  LA +   
Sbjct: 687 LVNEAAD---AGKAAPQDRPATFGSDALTLRKAAHGALDRVSTGIERLHFNVCLANIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +E+    DA       K+ P R  A  + +   E    L  +    +P LA + +  
Sbjct: 744 ANELA---DALARSRSNKSAPARDLAPDLSWSLREAAIILVQIFSPMMPHLAEECWQR 798


>gi|226311123|ref|YP_002771017.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094071|dbj|BAH42513.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 1026

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 138/395 (34%), Gaps = 18/395 (4%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYS--LRDEAYYNDDEVYKGA----DGQYYNA 152
            K  ++       +       Y        +  ++D+   N+ ++        +G++   
Sbjct: 375 SKERYEHSYPFCWRCKSPLLYYAMESWFIKTTAIKDQLIENNSKIDWYPGHLREGRFGKF 434

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSY---YESHPEFILPIERRNEVISFVKSGLKDLSL 209
               V W      ++               Y       L  +    +   ++     +  
Sbjct: 435 LEELVDWNISRNRYWGTPLNLWLCQDCGSEYAPGSVKELREKSVAPIDEKLELHKPFVDE 494

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
            +     G  +   P+ ++ VW D+ +       +    +    + +PAD+   G D   
Sbjct: 495 VKLRCSCGGTMERTPE-VIDVWFDSGSMPFAQYHHPFGDEKVFEEQYPADIISEGIDQTR 553

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F ++   + L +   P    + +   +   G+K+SKS GN IDP EVIEE G DA R+
Sbjct: 554 GWFFSLLAVSTLYNGKAPYKAVISTGHVLDEHGQKMSKSKGNGIDPWEVIEEFGADAFRW 613

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
            L+ + A      + K  + +     +          S+  ++  +     PT     + 
Sbjct: 614 ALLSDSAPWSSKRFSKRIVAEAKYKVIDKIHSTHDFYSLYGLIDAFKPEEHPTQPPVNKL 673

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKP--WELKKTNPDR 443
           D  I S  +  LQ + + ++          + + V E+ + Y    +   W    T PD+
Sbjct: 674 DRWIFSRLNTTLQHVVKGLETYDFMNPAGHIEAFVDELSNWYIRRSRDRFWSSGMT-PDK 732

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            S       EV+  LA ++  + P +A  ++  L 
Sbjct: 733 VSA-YQTLREVLLTLAKMIAPYAPLIAEDLYGNLG 766



 Score = 63.6 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
                       N QPHIGH    +I D + R+  + G  V+   G D HG  +    + 
Sbjct: 38  PNFVFYEGPPTANGQPHIGHVLGRVIKDFIGRYKTMSGYRVVRKAGWDTHGLPVELGVEK 97

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDT 105
                                 K  V +  + +R++ + +    D      T    + ++
Sbjct: 98  RLGISGKQEIENYGVAKFVEECKNSVFEYEKQWRELTEGIAYWTDMEHPYVTLTNDYIES 157

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              +   I  K  +YKG     Y    +   +  EV +G +
Sbjct: 158 VWHILSDIHKKELLYKGHRVSPYCPDCQTTLSSHEVAQGYE 198


>gi|320451519|ref|YP_004203615.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151688|gb|ADW23066.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 883

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 11/209 (5%)

Query: 1   MKERE------KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEH 54
           MK +E      K Y+     YP+   H+GH     + DVLARF ++ G +VL   G D  
Sbjct: 28  MKAKEVPGRKGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYEVLHPMGWDAF 87

Query: 55  GQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKK 112
           G     AA   G+  + +  +N R  ++  +++ I   +D  + T E  ++   + ++ K
Sbjct: 88  GLPAENAALKFGLHPRDWTYENIRQAKESLELMGILYDWDREVTTCEPDYYRFNQWIFLK 147

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + +KG  Y+      +  R +    +++V    +G+ +  +  PV+  E E ++ R++AY
Sbjct: 148 MWEKGLAYRAKGLVNWCPRCQTVLANEQV---VEGRCWRHEDTPVEKRELEQWYLRITAY 204

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVK 201
            ++LL   E           +   I   +
Sbjct: 205 AERLLEDLEGLDWPEKVKAMQRAWIGRSE 233



 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/373 (14%), Positives = 129/373 (34%), Gaps = 40/373 (10%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERR 193
           +Y       G   +      +   +++   Y+ R +  +++ L +  +  +F +P  +  
Sbjct: 484 FYETTCPKCGGPAKRDTDTMD--TFVDSSWYYLRYTDPKNETLPFDPAKADFWMPVDQYI 541

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
             V   V   L     ++   D G+   ++P   ++     L         ++       
Sbjct: 542 GGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGDRLRLP 601

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +  P  + +    I            + A L   +    H +   K   +SKS GN +  
Sbjct: 602 E--PTRVRLE---IPEKELSLEEVRKMGAELRPHEDGTLHFW---KPAVMSKSKGNGVMV 653

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              ++E G D  R  ++       +  + ++G++         G    ++R    + +D 
Sbjct: 654 GPFVKEEGADIARITILFAAPPENEMVWTEEGVQ---------GAWRFLNRIWRRVAEDR 704

Query: 374 DGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           + ++ T G F        D  +       L+++ E+++    + A+A ++ L++ +  Y 
Sbjct: 705 EALLATSGQFVAESLEGPDRELYQKLHATLKKVTEDLEALRFNTAIAALMELLNALYEY- 763

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQ 487
                         +   V  V    IR    +L  F P +A +++   +        + 
Sbjct: 764 -------------RKVRPVTPVYRTAIRYYLQMLFPFAPHIAEELWHWFWPDSLFEAGWP 810

Query: 488 SLDQRLKPGFMLH 500
            LD++     ++ 
Sbjct: 811 ELDEKALEKDVVE 823


>gi|240015063|ref|ZP_04721976.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240081652|ref|ZP_04726195.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240122132|ref|ZP_04735094.1| valyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240129102|ref|ZP_04741763.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268597749|ref|ZP_06131916.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268687483|ref|ZP_06154345.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|293398168|ref|ZP_06642373.1| valyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|268551537|gb|EEZ46556.1| valyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268627767|gb|EEZ60167.1| valyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291611431|gb|EFF40501.1| valyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|187918687|ref|YP_001884254.1| isoleucyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|259511496|sp|B2S1H8|SYI_BORHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119861535|gb|AAX17330.1| hypothetical protein BH0833 [Borrelia hermsii DAH]
          Length = 1044

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 77/486 (15%), Positives = 155/486 (31%), Gaps = 35/486 (7%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-TTKVFVDQNSRNFRD 82
           H  E +  D        DG  ++      E    I K      + T      + +   +D
Sbjct: 308 HTAEYVTTD--------DGTGIVHIAPFGEEDYNILKKNTKTDMITPIDAECRFTNEVKD 359

Query: 83  MADVLDISYDDFIRTTEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDD 139
              +     D+ I         +  +L+K    +      Y+      Y      + N +
Sbjct: 360 FEGLFVKDADNKI----IEKLKSMNLLFKRENFLHRYPFCYRTNSPLIYRPISSWFVNIE 415

Query: 140 EVYKGADGQYYNAQHNPVQWMEEE--GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
            + +            P    +     +      +      ++ +     +  +  N++ 
Sbjct: 416 AIKEKLIKSNEQINWIPSHLKKGRFGKWLENARDWAISRNRFWGNPIPVWICSKTGNKIC 475

Query: 198 SFVKSGLKDLSLSRKT--FDWGIKIPDDPQY----------IMYVWIDALTNYLTTTGYL 245
              K  L+ LS  +        I     P            ++  W ++ +    +  Y 
Sbjct: 476 IGSKEELERLSGQKVNDLHKDKIDKITWPSQYGGTYVRTSEVLDCWFESGSMPYASKHYP 535

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PAD    G D     F+ +      L         + +   +   G K+
Sbjct: 536 FKDKDKFHDIFPADFIAEGLDQTRGWFYTLTILGTALFEQTAFKNVIVNGLVLSSDGRKM 595

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSL N  DP+EVI   G DALR +LV       D     D   K V  ++   I N  S
Sbjct: 596 SKSLRNYTDPMEVINTFGADALRLYLVMSPVVRADDLKYSDDGVKDVLKNIIIPIWNAYS 655

Query: 364 RSVSM--ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             ++   I K               D+ I+S    + + + E +    + +++ ++++ +
Sbjct: 656 FFITYAIIDKFEPNSNIVLYKTNILDKWIISEIESLKKTLNEEIDKYNLTKSIEELLAFI 715

Query: 422 SEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +++ ++  +      K+  D             ++ L ++L  F+P L  +I+  L   
Sbjct: 716 DKLNNWYIRRSRRRFWKSENDNDKIDAYETLYYALKNLMLMLAPFIPFLTEEIYQNLKTK 775

Query: 481 DENRCF 486
           DE    
Sbjct: 776 DEKESI 781



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M++RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MQQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYKTMKGKHVKRYFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    + +                     K  V + ++ ++     L   + ++   +
Sbjct: 90  LPVEYEVEKSLQISGRYEIEKYGVDKFNEECKNIVLRYTKEWQKTISRLGRWVDFEHNYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   +++ + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDTTFMESVWWVFQTLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|15618033|ref|NP_224317.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835645|ref|NP_300169.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8928383|sp|Q9Z972|SYI_CHLPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4376371|gb|AAD18262.1| Isoleucyl-tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|8978483|dbj|BAA98320.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 1043

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 74/468 (15%), Positives = 146/468 (31%), Gaps = 31/468 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       V      D HG    +  Q  G     ++    +            +     
Sbjct: 332 FLVCKENHVPLVCPVDAHGSFTEEIPQYQG----QYIKHADKEIIKFLKKEGRIF----- 382

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYN 151
                +H T +  +                 +      ++D+    +  ++   +     
Sbjct: 383 -----YHGTVKHRYPFCWRTDTPLIYKAVNSWFVAVEKIKDKMLRANSSIHWVPEHIQEG 437

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL-- 209
                ++   +              +         ++   R  E ++  +          
Sbjct: 438 RFGKWLEGARDWAISRNRYWGTPIPIWKSADGEILVVGSIRELEELTGTQITDIHRHFID 497

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G      P Y+   W D+         Y         + +PAD    G D   
Sbjct: 498 DLNIVKDGKPFHRIP-YVFDCWFDSGAMPYAQNHYPFENQKETEEAFPADFIAEGLDQTR 556

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   + +L         + +   +   G K+SK L N   P  V++  G DALR 
Sbjct: 557 GWFYTLTVISAILFDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRL 616

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           +L+  +    +D  +   G++  +   L      L   +    L  +D        A+TE
Sbjct: 617 YLLHSVVVKAEDLRFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQDIEPAYTE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPD 442
            D+ ILS    V+ ++RE+M    ++ A+   ++ + ++ + Y     ++ WE  +  PD
Sbjct: 677 IDQWILSNLYSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWE-AEDTPD 735

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           R         EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 736 R-RAAFSTLYEVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +   T   
Sbjct: 47  PPFATGLPHYGHLLASTIKDVVGRYATMDGYYVPRRFGWDCHGVPVEYEVEKSLSLTAPG 106

Query: 73  VDQ------NSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
             +       +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 107 AIEDFGIASFNEECRKIVFRYVHEWEYYINRIGRWVDFSSTWKTMDASFMESVWWVFQSL 166

Query: 114 SDKGDIYKGC 123
            ++G +Y+G 
Sbjct: 167 YNQGLVYEGT 176


>gi|291515873|emb|CBK65083.1| Isoleucyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 1131

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 84/467 (17%), Positives = 160/467 (34%), Gaps = 37/467 (7%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTE--KRHHDTCRIL 109
           +    +   A+N     +         +R    VL    D  FIRTT   +R  +  + +
Sbjct: 425 DIDIAVMLKAENKAFKIEKHTHSYPHCWRTDKPVLYYPLDSWFIRTTALRERMIELNKTI 484

Query: 110 -WKKISDKGDIYKGCYSG---WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
            WK  S     +     G   W   R   +     V+   D        +  + M E   
Sbjct: 485 RWKPESTGTGRFGKWLEGLVDWNLSRSRFWGTPLPVWATEDYSEVKCIGSVEELMAEIER 544

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
                  Q+     +             N  +         L  S+       +      
Sbjct: 545 SIAAGVMQENPYRNFRVGDMSKENYSTENIDLHRPYVDSIVLVSSKG------EPMRRES 598

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
            ++ VW D+         Y         + +PAD    G D     F  ++  A +L  +
Sbjct: 599 DLIDVWFDSGAMPYAQVHYPFENKEGFGQVYPADFIAEGVDQTRGWFFTLHAIASMLFDS 658

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +     + +   +   G K+SK LGN +DP EV++  G DA R++++       +  +D+
Sbjct: 659 MAFKNIISNGLVLDKNGNKMSKRLGNAVDPFEVLDTYGADATRWYMISNSQPWDNLKFDR 718

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVL 398
           DG+ + V       + N  S     +  + DG              E D  I+S+ + ++
Sbjct: 719 DGVDE-VRRKFFGTLYNTYSFFA--LYANVDGFTGREEEVPMEKRPEIDRWIISLLNTLV 775

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEV 454
           + + E++++     A   +   V E   + Y   + ++ W    +    A+         
Sbjct: 776 KNVTESLEDYDPTPAARAIQEFVGENLSNWYVRLNRKRFWGGGMSEDKLAA--YQTLYTC 833

Query: 455 IRQLAILLQAFVPKLANKIFDILFV-----ADEN---RCFQSLDQRL 493
           +  + +L   F P ++++IF  L        DE+     F + D+RL
Sbjct: 834 LETVTMLAAPFAPFISDRIFTDLNAVSGRHKDESVHLAAFPTADERL 880



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I DV  R+    G  V    G D HG  +   
Sbjct: 36  EGHPTFVFYEGPPSANGMPGIHHVMARTIKDVFCRYKTQQGYLVHRKAGWDTHGLPVELG 95

Query: 62  AQNAGVTTK---------------------VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     TK                      F  +     R M   +++  DD   T + 
Sbjct: 96  VEKKLGITKEDIGKKISIEEYNRTCREAVMEFTGKWEDLTRKMGYWVNM--DDPYITYDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ DKG +YKG     YS       +  E+ +   
Sbjct: 154 KYIETLWWLLKQLFDKGLLYKGYTIQPYSPAAGTGLSTHELNQPGC 199


>gi|149915697|ref|ZP_01904223.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810589|gb|EDM70432.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 860

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 37  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLSTGHNVLHPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N  + R     L +S D      T +  ++   + L+  + +KG +Y
Sbjct: 97  MAIGGHPKDWTYSNIADMRSQMKPLGLSIDWSREFATCDPEYYGQQQALFLDMLEKGLVY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FFR+S + + LL   
Sbjct: 157 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERRELTQWFFRISDFAEDLLEAL 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   ++           GL+
Sbjct: 213 DGLDNWPAKVKLMQANWIGRSRGLQ 237



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 125/401 (31%), Gaps = 94/401 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L    +  +   P++R          
Sbjct: 439 WGLSRQRYWGCPIPVIHCEACGVVPEAKENLPIRLPDDVTFDQPGNPLDRHPT------- 491

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y             D ++A++W   
Sbjct: 492 -----WRDCTCPACGAPARRETD-TMDTFVD-SSWYFARFTAPHATTPTDMAEAEYWMNV 544

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP-----LPKKVFSHGFILHK---------- 299
           D ++ G +    H +Y      A  L+ +LP         +F+ G + H+          
Sbjct: 545 DQYIGGIEHAILHLLYSRFFARAMQLTGHLPAKAIEPFDALFTQGMVTHEIYQTRDANGR 604

Query: 300 -------------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                      K+SKS  NV+DP+ +I   G D  R+F++ +  
Sbjct: 605 PVYHLPEDVEGGKLIATGETVEIIPSAKMSKSKKNVVDPVTIIRAFGADTARWFVLSDSP 664

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +   G +                R ++ + +       +  A    DE++L   
Sbjct: 665 PERDVEWTAAGAEA-------------AFRHLARVHRIVTEAAASDAAPNADDEALLREM 711

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + + ++   +++   + A+A++ +  + + +             +  R         E 
Sbjct: 712 HKAIHDVTSGVESFGFNAAIARLYAFTNALSK--------SQAGGDARR---------EA 754

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
            R L  L+    P L+ +++ +L       N  +   D+ +
Sbjct: 755 ARALVQLMSPMTPHLSEELWSVLGGEGLVANAAWPQADEAM 795


>gi|145250135|ref|XP_001396581.1| leucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134082094|emb|CAK42211.1| unnamed protein product [Aspergillus niger]
          Length = 989

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 10/236 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K YI +   YP+   H+GH     I+DVLARF+R+ G +VL   G D  G     AA 
Sbjct: 84  KPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHEVLHPMGWDAFGLPAENAAI 143

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    + + N    ++    +  S+  D  + T     ++  + ++  + +KG  Y+
Sbjct: 144 ERGIDPAEWTESNITKMKEQLRSISTSFDWDRELATCAPEFYEHTQRIFLMLYEKGLAYQ 203

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 Y   D+    +++V   A+G  + +    V+ ++ + +FFR++ +++ LL   +
Sbjct: 204 AEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLKLKQWFFRITDFKEMLLKDLD 260

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           S     L       V+S  ++ L     ++  F   +   +     + V+      
Sbjct: 261 S-----LAGGWPERVLSMQRNWLGKSQGAKIKFPVAVNGNNGTDIDIDVFTTRPDT 311



 Score = 42.8 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 31/199 (15%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP       G D  R  ++      +   +D+  +   +R    L
Sbjct: 692 NVSFEKMSKSKHNGVDPTGCALRYGADTTRAHVLFSAPVSEVLEWDETKIVGIERWFGRL 751

Query: 355 ANGIGN----LVSRSVSMILKDYDGM-------IPTPGAFTESDESILSVCSRVLQEIRE 403
              + +    L S S ++   D             +    ++SD   +    R +  +  
Sbjct: 752 WKLVNDAQQSLASFSFTLQPADLKATSGHATGLPSSLQDLSDSDADAVLATHRTISSVTS 811

Query: 404 NMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++     ++  ++ +  L +                       +   V    I  L  L
Sbjct: 812 CIEKNPYGLNTVISDLTKLTNS----------------LSSSTPSSPQVLYLSISSLLRL 855

Query: 462 LQAFVPKLANKIFDILFVA 480
           L    P LA++ ++IL   
Sbjct: 856 LSPIAPALASECWEILNGP 874


>gi|260439575|ref|ZP_05793391.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291042810|ref|ZP_06568551.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291013244|gb|EFE05210.1| valyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 945

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDNEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D       A     +  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGHSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPL 203


>gi|294651262|ref|ZP_06728589.1| valine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822857|gb|EFF81733.1| valine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 965

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 133/405 (32%), Gaps = 89/405 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++   +  +   +      +P +  N  +S+++  ++D  +SR+   W
Sbjct: 380 VEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYTNMYMSWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +  +YV                            W  +     +T G+  
Sbjct: 438 GHRIPAWYDAEGNIYVGRNEEEVRSKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           +     A  +     P D+ V G DI+ F         +           +P        
Sbjct: 498 DAQKDAANDFLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQVPFKTVYVHG 557

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE---------------------------------- 319
                +G+K+SKS GNV+DP+++I+                                   
Sbjct: 558 LVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEG 617

Query: 320 ---VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G DA+R+        G+D  +D   ++     +  N I N     +  +     G 
Sbjct: 618 INAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQ 675

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
              P  +   ++ I+S   +    + +      +  A   +   +     D Y +  KP 
Sbjct: 676 EARPDLWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKP- 734

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VLNDANVSEERKAEVRRVLLAVMESSLRLAHPLMPYLTEEIWQTL 779



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       +R  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGINRHDLGREKFIDKVWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ K+ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|226951602|ref|ZP_03822066.1| valyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837661|gb|EEH70044.1| valyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 965

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 133/405 (32%), Gaps = 89/405 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++   +  +   +      +P +  N  +S+++  ++D  +SR+   W
Sbjct: 380 VEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYTNMYMSWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +  +YV                            W  +     +T G+  
Sbjct: 438 GHRIPAWYDAEGNIYVGRNEEEVRSKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           +     A  +     P D+ V G DI+ F         +           +P        
Sbjct: 498 DAQKDAANDFLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQVPFKTVYVHG 557

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE---------------------------------- 319
                +G+K+SKS GNV+DP+++I+                                   
Sbjct: 558 LVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEG 617

Query: 320 ---VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G DA+R+        G+D  +D   ++     +  N I N     +  +     G 
Sbjct: 618 INAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQ 675

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
              P  +   ++ I+S   +    + +      +  A   +   +     D Y +  KP 
Sbjct: 676 EARPDLWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKP- 734

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VLNDANVSEERKAEVRRVLLAVMESSLRLAHPLMPYLTEEIWQTL 779



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       +R  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGINRHDLGREKFIDKVWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ K+ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|294838278|ref|ZP_06782961.1| valyl-tRNA synthetase [Acinetobacter sp. 6013113]
 gi|294857437|ref|ZP_06795206.1| valyl-tRNA synthetase [Acinetobacter sp. 6013150]
          Length = 959

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGTDARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|262374949|ref|ZP_06068183.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309962|gb|EEY91091.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 873

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E  + YI +   YP+ + H+GH     I DV++RFHRL G  VL   G D  G     AA
Sbjct: 35  EGPRRYILSMFPYPSGKLHMGHVRNYTIGDVISRFHRLKGETVLQPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L   + +D    T    ++   + L+ ++  KG IY
Sbjct: 95  IAHQVAPAKWTFENIAYMRDQLKKLGLAVDWDREFATCTPEYYRWEQWLFVQLYKKGLIY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 155 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 210

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +            G+
Sbjct: 211 DTLKDGWPQQVLTMQRNWIGRSQGM 235



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 21/193 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 634 EKMSKSKNNGIDPQSIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 687

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R +   + K          A + + + +       +Q++ ++++ +   + A+A ++
Sbjct: 688 RVWRLATGFLEKANTAASIDKTALSTAAQDLRRKTHETIQKVGDDIERRHAFNTAIAALM 747

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++               +    + V  E I  L  LL  F P L+  +     
Sbjct: 748 ELLNANNKF-------------EAQDDNDVAVARESITTLLTLLAPFAPHLSQTLLAEFG 794

Query: 479 VADENRCFQSLDQ 491
           +   +  F ++D+
Sbjct: 795 IELNSTLFPAVDE 807


>gi|312131216|ref|YP_003998556.1| valyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907762|gb|ADQ18203.1| valyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 872

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 129/370 (34%), Gaps = 51/370 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++            +    ++P + +N   +     ++D ++SR+   W
Sbjct: 351 IEPKISLQWFLKMKDISKPAWENVMNDTIKLIPPKFKNT-YNHWMENVRDWNISRQ-LWW 408

Query: 217 GIKI-----------------------------------PDDPQYIMYVWIDALTNYLTT 241
           G +I                                       + ++  W  +    ++ 
Sbjct: 409 GHRIPAYYLADGTVIVAKSLEDAVKIANTEKGLNVKAEDFTQDEDVLDTWFSSWLWPISV 468

Query: 242 TGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
                NPD      ++P +  V   +IL F    +    +      P      +      
Sbjct: 469 FDGFKNPDNEDINYYYPTNDLVTAPEILFFWVARMIIAGYEYKGTYPFKNVYLTGIVRDK 528

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKSLGN  DP+++I++ G DA+R  ++     G D  +D+  +++  N       
Sbjct: 529 LGRKMSKSLGNSPDPLDLIDKYGADAVRTGMLFSSPAGNDLPFDEKLVEQGRN------F 582

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            N +  +  ++       +      T   +   +  +  + EI ++ +   +  AL    
Sbjct: 583 SNKIWNAFRLVK---GWNVGEGEPQTAPIQWFRAKLNATIAEILDHYEKFRMSDALLATY 639

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +L+      +Y +  KP  +        ++    T+    +L  L   ++P ++ +I+  
Sbjct: 640 NLIWNDFCSQYLEMVKPAYIDGVGQPIDASTYEATLSFFDELMRLAHPWIPFISEEIWQN 699

Query: 477 LFVADENRCF 486
           L   +EN   
Sbjct: 700 LKTREENASI 709



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 18/158 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++E   I           H+GH     I DVL R  R++G +  +  GTD         
Sbjct: 32  KDKEPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRKARMEGKEACWVPGTDHASIATEAK 91

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
                            +        + ++           L  S  +D    T E   +
Sbjct: 92  VVAMLKEKGINKADLSREEFLKYCWEWTEKYGGIILKQLRKLGASCDWDRTRFTMEPSLY 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           D    ++  + +KG IY+G     +    +   +D+EV
Sbjct: 152 DAVIEVFVDLYNKGHIYRGYRMVNWDPEAKTTVSDEEV 189


>gi|284040364|ref|YP_003390294.1| valyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283819657|gb|ADB41495.1| valyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 895

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 142/398 (35%), Gaps = 51/398 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       L         ++P + +N +       + D  +SR+   W
Sbjct: 352 IEPKLSLQWFLKMDELSKPALKNVMDDTIQLVPPKFKN-MYRSWMENVHDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       + ++  W  +    ++
Sbjct: 410 GQRIPAFYMQDGTIIVARNKHEALEKVQHEKLLFAMTEADLTQDEDVLDTWFSSWLWPMS 469

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               L +P+ +    ++P +  V   +IL F    +    +      P      +     
Sbjct: 470 VFDGLKDPNNADINYYYPTNDLVTAPEILFFWVARMIIAGYEYRGEAPFKNVYLTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++I++ G D +R  ++   A G D  +D+  +++    + +N 
Sbjct: 530 KLGRKMSKSLGNSPDPLDLIDQYGADGVRTGMLFSSAAGNDLMFDEKLVEQ--GRNFSNK 587

Query: 358 IGNLVSRS--VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           + N        ++   + +  + T  A +   +   S  +  L +I ++     I  AL 
Sbjct: 588 VWNAFRLVKGWTVADANNNDNVETRHALSLPIQWFESKLNATLIQIEDDFSKFRISDALQ 647

Query: 416 QVISLVSE--VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            V  L+ +    +Y +  KP    +  T+          T+    +L  L   F+P +  
Sbjct: 648 AVYKLIWDDFCSQYLELIKPPFDAVTGTSHPIDKATYEATINFFERLMGLAHPFMPFITE 707

Query: 472 KIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           +I+  +    A E+ C  S  +       +   FD +F
Sbjct: 708 EIWQDIRERQAGESICISSFPKAGTVDSQVLTDFDTLF 745



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E+E   I           H+GH     I DVL R  R++G +  +  GTD          
Sbjct: 32  EKEPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRKARMEGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        +  +           L  S  +D    T E   HD
Sbjct: 92  VAMLKERGISKKDLTREEFLEYAWEWTHKYGGIILSQLRKLGASCDWDRTRFTMEPALHD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +   ++  + +KG IY+G     +  +     +D+EV
Sbjct: 152 SVIDVFVDLYEKGQIYRGVRMVNWDPQGRTAVSDEEV 188


>gi|225551776|ref|ZP_03772719.1| valyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371571|gb|EEH00998.1| valyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 875

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 164/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSVKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           ++   G  Y +    ++      +F R+    DK L   ++      P +  N       
Sbjct: 338 HRQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALQNGELKFYPKKWENT-YKHWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I   G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINGYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+ + +      F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKNREILNDLK--FNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENIDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFSEKEDILAL 704



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ D+L R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDESLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|33241445|ref|NP_876386.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33235953|gb|AAP98043.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 1043

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 74/468 (15%), Positives = 146/468 (31%), Gaps = 31/468 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       V      D HG    +  Q  G     ++    +            +     
Sbjct: 332 FLVCKENHVPLVCPVDAHGSFTEEIPQYQG----QYIKHADKEIIKFLKKEGRIF----- 382

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYN 151
                +H T +  +                 +      ++D+    +  ++   +     
Sbjct: 383 -----YHGTVKHRYPFCWRTDTPLIYKAVNSWFVAVEKIKDKMLRANSSIHWVPEHIQEG 437

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL-- 209
                ++   +              +         ++   R  E ++  +          
Sbjct: 438 RFGKWLEGARDWAISRNRYWGTPIPIWKSADGEILVVGSIRELEELTGTQITDIHRHFID 497

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G      P Y+   W D+         Y         + +PAD    G D   
Sbjct: 498 DLNIVKDGKPFHRIP-YVFDCWFDSGAMPYAQNHYPFENQKETEEAFPADFIAEGLDQTR 556

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   + +L         + +   +   G K+SK L N   P  V++  G DALR 
Sbjct: 557 GWFYTLTVISAILFDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRL 616

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           +L+  +    +D  +   G++  +   L      L   +    L  +D        A+TE
Sbjct: 617 YLLHSVVVKAEDLRFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQDIEPAYTE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPD 442
            D+ ILS    V+ ++RE+M    ++ A+   ++ + ++ + Y     ++ WE  +  PD
Sbjct: 677 IDQWILSNLYSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWE-AEDTPD 735

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           R         EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 736 R-RAAFSTLYEVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +   T   
Sbjct: 47  PPFATGLPHYGHLLASTIKDVVGRYATMDGYYVPRRFGWDCHGVPVEYEVEKSLSLTAPG 106

Query: 73  VDQ------NSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
             +       +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 107 AIEDFGIASFNEECRKIVFRYVHEWEYYINRIGRWVDFSSTWKTMDASFMESVWWVFQSL 166

Query: 114 SDKGDIYKGC 123
            ++G +Y+G 
Sbjct: 167 YNQGLVYEGT 176


>gi|226294727|gb|EEH50147.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 972

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 91/235 (38%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK YI     YP+   H+GH     IAD+LARF  + G DVL   G D  G     AA
Sbjct: 66  GKEKAYILAMFPYPSGTLHMGHVRVYTIADMLARFKHMKGYDVLHPMGWDAFGLPAENAA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N ++    +   +D    + T     +   + L+  +  +G  Y
Sbjct: 126 IERGIDPAQWTMQNIANMKEQLRAIGAHFDWNRELMTCSPEFYKHTQRLFLMLYGRGLAY 185

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+    + +FFR++A+++ LL   
Sbjct: 186 QAKALVNYDPVDKTVLANEQVNANGCSWRSGAKVKKVEL---KQWFFRITAFKEALLKDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           ++     L       V+S  +  L   + +   F       +    +     D L
Sbjct: 243 DA-----LADGWPERVLSMQRHWLGKSTGAHIKFLVSAPDDNYDIQVFTTRPDTL 292



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 22/206 (10%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + PL K  +    I  +  K+SKS  N +DP   I   G DA+R  ++      +   +D
Sbjct: 656 DAPLIKGTWIAPNITFE--KMSKSKHNGVDPTTCINTYGSDAIRAHILFSAPVSEILEWD 713

Query: 343 KDGLK--KRVNADLANGIGNLVSRSVSM------ILKDYDGMIPTPGAFTESDES-ILSV 393
           +  +   +R    L   + +  +   S        LK  + +       T  DE+ IL  
Sbjct: 714 ESKIVGMERWFNRLWRVVTDAQNSLESFSLLSKESLKHMNDIRLLDLKKTSDDEANILLT 773

Query: 394 CSRVLQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++ +   +      ++  ++ +    +       +        + P    T+LY+ 
Sbjct: 774 THDTIKSVSHCLDETPYGLNTVISDLTKFTNA----LASSSLPATASSPPS--QTILYIA 827

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           +  + +L        P LA++ ++ L
Sbjct: 828 LSSLLRLLA---PITPALASECWEHL 850


>gi|288576165|ref|ZP_05978301.2| leucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566078|gb|EFC87638.1| leucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 878

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 635 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 689 RLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 748

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T+ ++   V     EV+     LL   VP +   ++  
Sbjct: 749 VMELLNQYDK----------TDTSGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 795

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 796 LNGAKLWEAGWPTVDEA 812


>gi|326792707|ref|YP_004310528.1| isoleucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326543471|gb|ADZ85330.1| isoleucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 1043

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/416 (14%), Positives = 123/416 (29%), Gaps = 33/416 (7%)

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           D F++  +       +            +   +          Y  D    +    +   
Sbjct: 361 DVFVKNADPEILKYLKEQGTLFKAMPHTHSYPHCWRCDTPLLYYARDTWFIEMTKVRDRL 420

Query: 152 AQHNPVQWMEEEG---------------YFFRLSAYQDKLLSYYESHPEFILPIERRNE- 195
             +N       E                +    S Y    L  +E        I    E 
Sbjct: 421 VANNKTVNWMPESIGEGRFGNFLEGVIDWGLSRSRYWGTPLPIWECKCGHKHLIGSIEEL 480

Query: 196 ---------VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
                     I   K  + ++ L+       +    D   ++  W D+ +       Y  
Sbjct: 481 KSMSSDCPDNIELHKPYIDNVHLNCPECGSTMTRVSD---VIDCWYDSGSMPFAQLHYPF 537

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                  + +PAD      D     F+ +   + L+    P    +         G K+S
Sbjct: 538 ENKEVFEENFPADFISEAVDQTRGWFYTLMAISTLIFDKAPYKNVIILGHVGDKDGVKMS 597

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           K  GNV+DP  V++  G DA+R++     A      +  + + +     +          
Sbjct: 598 KHKGNVVDPWSVLDVQGADAVRWYFYSASAPWLPSRFAGENVSESQRKFMGTFWNTYAFY 657

Query: 365 SVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +   + ++D              D+ +LS    +++ + E+++N  I  A   +   + 
Sbjct: 658 VLYANIDEFDPTKYELKYDTLNMMDKWVLSKLHTLVKSVDEDLENYRIFEAARDMQDFID 717

Query: 423 EV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           EV + Y    +    +   P            V+  LA L   F P +A +I+  L
Sbjct: 718 EVSNWYVRRSRERFWQSDMPQDKINAYKTLHTVLVTLAKLAAPFTPFMAEQIYQNL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH     + D++ R+  + G  VL   G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHILTRTMKDIMPRYKTMKGYKVLRKAGWDTHGLPVELEVEKLLGISGKP 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCRILWKKI 113
                         K  V +    +  M+D +    D      T +  + ++     ++I
Sbjct: 107 QIEEYGIEPFISKCKESVWKYQSEWEKMSDRVGYWVDMEHPYVTYDNNYIESVWWSLRQI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  IYKG     Y  R     +  EV +G  
Sbjct: 167 WDKDLIYKGHKIVPYCPRCGTSLSSHEVAQGYK 199


>gi|242278126|ref|YP_002990255.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121020|gb|ACS78716.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 831

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 6/188 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     A
Sbjct: 31  ESRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARYKRMKGFNVLHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L  SYD    + T    ++   +  + K  +KG +
Sbjct: 91  AIKHNTHPAEWTYANIDDMRTQLKRLGYSYDWRRELATCHPGYYKWEQQFFLKFLEKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V +G            V   E   +F R++ Y ++LL  
Sbjct: 151 YRKKSPVNWCETCHTVLANEQVEEG----LCWRCDTEVIQKELSQWFMRITDYAEELLES 206

Query: 180 YESHPEFI 187
                   
Sbjct: 207 LGELEGGW 214



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 101/276 (36%), Gaps = 27/276 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIY 274
           K+       M  ++++   ++  T          +K    + P D ++ G +    H +Y
Sbjct: 490 KMAQRETDTMDTFVESSWYFMRYTDSRKADAPFDSKSLEYWTPVDQYIGGIEHAILHLLY 549

Query: 275 WPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F            + P  K + + G +L  G K+SKS GNV+DP  +I + G DA R
Sbjct: 550 ARFFTKILRDEGYTELSEPF-KNLLTQGMVLKDGAKMSKSKGNVVDPNAMINKYGADATR 608

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            F++      KD  +   GL+        N I  L       +        P+    +++
Sbjct: 609 LFILFASPPEKDLEWSDQGLEGAHR--FLNRIWRLAEEFEGKLSATGACAKPSMELSSDA 666

Query: 387 DESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            + +       ++    +M+N    +  +A  + LV+E+    D     +L +T   R +
Sbjct: 667 -KKLRLKEHETVKRASRDMENKFQFNTVIAASMELVNEIYSLKD-----KLMETEDGRFA 720

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                       +  +L    P +  +++  +    
Sbjct: 721 -----LSSAYSTVLTVLSPIAPHICEELWAAMGYEG 751


>gi|254804285|ref|YP_003082506.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667827|emb|CBA03822.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 878

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 124/360 (34%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 492 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 548

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 549 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 604

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R  +    A  L         V S        EK+SKS  N +DP E+I
Sbjct: 605 ADVELTFDDKGRPISAVLKADGLP-------VVISGT------EKMSKSKNNGVDPQELI 651

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 652 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 705

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +       + ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 706 AFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 758

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 759 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 812


>gi|121634048|ref|YP_974293.1| valyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120865754|emb|CAM09483.1| valyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 945

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDNEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S +     D Y +  K  +L+     R     +
Sbjct: 680 DRLNQTIEQVTQAYETYRFDLAAETLYSFMWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|300853397|ref|YP_003778381.1| isoleucyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433512|gb|ADK13279.1| isoleucyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 1035

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 134/400 (33%), Gaps = 16/400 (4%)

Query: 109 LWKKISDKGDIYKGCYSGWY-SLRDEAYYNDDEVYKGADGQYYNAQHNPVQ------WME 161
            W+  +      +  +      +RD+   N ++     D        N V+         
Sbjct: 387 CWRCDTPLLYYPRDTWFIRMSQMRDKLVKNTNDTNWYPDNIRTGRFGNFVEGVIDWGLSR 446

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           E  +   L  ++ +            L  +  N              +  K    G K  
Sbjct: 447 ERYWGTPLPIWECECGHRECIGSIKELKEKGINVPDDIELHKPYIDRVKLKCPHCG-KEM 505

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
                ++  W D+ +       Y         K +PA       D     F+ +   + +
Sbjct: 506 KRVSEVIDCWFDSGSMPFAQHHYPFENKEVFEKNFPAQFISEAVDQTRGWFYTLMAISTV 565

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +    P    V     +   G K+SK  GNV+ P  ++E  G DA R++   E A     
Sbjct: 566 MFDRSPFENCVVLGHVLDKHGLKMSKHKGNVLSPSTILENEGADAARWYFYTESAPWLPS 625

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVL 398
            + ++ ++      L           +   L +++ M           D+ I+S  + ++
Sbjct: 626 RFYEEAVQDSQRKFLGTLWNVYSFYVLYADLDNFNPMDYKDFVSENVMDKWIISRLNSLI 685

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  +++ N  I +A   + + V E+ + Y   +  + W  K T+    +       +V+
Sbjct: 686 KQTEDHLDNYRITQAAQNIGNFVDELSNWYVRRNRSRFWSQKLTDDKIGA--YLTLYKVL 743

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             L ++   FVP +  +I+  L V  +    +S+     P
Sbjct: 744 NTLCLVAAPFVPFMTEEIYQNLVVNLDKNAVESVHLCKWP 783



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 68/188 (36%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
           ++ E           N +PHIGH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHIGHVLTRVMKDLIPRYKVMRGYKVLRKAGWDTHGLPVELE 95

Query: 61  ---------AAQNAGVTTKVFVDQ-------NSRNFRDMADVLDI--SYDDFIRTTEKRH 102
                      Q      + F+ +           +++M+D L      D+   T    +
Sbjct: 96  VEKSLGISGKPQIEKYGVEDFIKKCKNSVFTYVSQWKEMSDRLGFWVDMDNPYVTYHNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     KKI +K  +YKG     Y  R     +  EV +G       + +   +  ++
Sbjct: 156 IESEWWALKKIWEKDLLYKGHKIVPYCPRCGTALSSHEVSQGYKDVKETSVYVKFKIKDQ 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DKYMIAWT 223


>gi|218767134|ref|YP_002341646.1| valyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|12585347|sp|Q9JX22|SYV_NEIMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|121051142|emb|CAM07413.1| valyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319411341|emb|CBY91752.1| valyl-tRNA synthetase (valine-tRNA ligase; ValRS) [Neisseria
           meningitidis WUE 2594]
          Length = 945

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDNEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S +     D Y +  K  +L+     R     +
Sbjct: 680 DRLNQTIEQVTQAYETYRFDLAAETLYSFMWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|296313398|ref|ZP_06863339.1| valine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840109|gb|EFH24047.1| valine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 945

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVMQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGYNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|270159542|ref|ZP_06188198.1| leucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269987881|gb|EEZ94136.1| leucyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 795

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 2   NKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N  + +     L  +YD    I T    ++   +  + ++ +KG +Y
Sbjct: 62  IKNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREISTCTPEYYRWEQWFFIRLFEKGLVY 121

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F +++AY D+LLS  
Sbjct: 122 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITAYADELLSSL 177

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++         +G
Sbjct: 178 DSLDEWPSQVKQMQRNWIGRSTG 200



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 96/270 (35%), Gaps = 32/270 (11%)

Query: 228 MYVWIDALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
              ++++   Y         +     +AK+W P D +V G +    H +Y   F      
Sbjct: 463 FDTFVESSWYYARFACKGQENAMLDDRAKYWTPVDQYVGGIEHAVMHLLYARFFHKLMRD 522

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              ++++ P  K + + G +L  G K+SKS+GNV+DP  +I   G D  R F++      
Sbjct: 523 EGLVNSDEPF-KALLTQGMVLKDGHKMSKSVGNVVDPNHLINTYGADTARLFVMFAAPPE 581

Query: 337 KDGFYDKDGLKKRVN-----ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +   +    ++            A    N+ +    +IL     +           +   
Sbjct: 582 QSLEWSDTAVEGAHRFLKRIWYFAYQHQNMFTDINDLILSGNGHVNWQQAESRL--KKSR 639

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  ++L +   +      +  ++  + L +E+  Y          +T  D+     +  
Sbjct: 640 HIVHQILAQATHDYDRNQFNTVVSGCMKLFNELSSY--------SIETEDDK-----FFI 686

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +  L  LL    P + + ++  L    
Sbjct: 687 HSGMSILLRLLAPITPHITHHLWQQLGFEK 716


>gi|296118756|ref|ZP_06837332.1| valine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968245|gb|EFG81494.1| valine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 907

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 118/366 (32%), Gaps = 52/366 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F  +        +   +    I P  +      +V   + D ++SR+   W
Sbjct: 368 IEPRLSLQWFVAVEKLAKMSAAAVRAGDTKIHPEAQEARFFEWVD-NMHDWTISRQ-LWW 425

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I I   P+                          ++  W  +     +T G+ +   
Sbjct: 426 GHRIPIWYGPEDADGNRDIICLGPDETAPEGYEQDPDVLDTWFSSALWPFSTLGWPEKTP 485

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSH 293
               KF+P ++ V G DI+ F       F   A                 +P        
Sbjct: 486 -DLEKFYPTNVLVTGYDIIFFWVARMMMFGTFASTETPELLGTGDDGRPQVPFRDLYLHG 544

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                 G K+SKSLGN IDP++ + + G DALR+ L R    G D     D      N  
Sbjct: 545 LVRDEHGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGTDLPLGSDAAASARN-- 602

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            A  + N  ++   M     D + P     T++D  IL     V   +   + +    RA
Sbjct: 603 FATKLFN-ATKFALMNGAGIDVL-PNRDELTDADRWILDRAEDVRVRVDAYLDDYQFSRA 660

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +     +   D Y +  K    +            V   V+  +  LL   +P +  
Sbjct: 661 NELLYHFAWDELCDWYVEIAKTQIPRDGVSATGRNTQVVLGRVLDVVLRLLHPTMPFVTE 720

Query: 472 KIFDIL 477
            ++  L
Sbjct: 721 VLWQAL 726



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 23/162 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G       
Sbjct: 46  DKEPFSIVLPPPNVTGQLHMGHALDHTLMDSIIRRKRMQGYSALWLPGYDHAGIATQTKV 105

Query: 63  QNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
           +     T          + F+++                + + D +D S + F  T +  
Sbjct: 106 EARLKETEGKSRWDYEREEFINKVWEWKDEYGKTITSQMKAIGDSVDWSRERF--TLDDG 163

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++K++ D G IY+      +S   E   +D EV  
Sbjct: 164 LSRAVQTIFKQLFDAGMIYQANRLVNWSPVLETAVSDIEVVY 205


>gi|124003834|ref|ZP_01688682.1| isoleucyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990889|gb|EAY30356.1| isoleucyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 1156

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 96/266 (36%), Gaps = 12/266 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K     Q ++ VW D+         Y         +   +PAD    G D     F  ++
Sbjct: 608 KPMYREQDLIDVWFDSGAMPYAQLHYPFQNKDMIDERDEFPADFISEGVDQTRGWFFTLH 667

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A +L  ++     V +   +  +G K+SK LGN +DP E ++  G D  R++++    
Sbjct: 668 AIAGMLFDSVAFKNVVSTGLVLDAEGRKMSKRLGNAVDPFETMDAHGADTTRWYMISNAN 727

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILS 392
              +  +D +G+K+                +    L  ++            E D  ILS
Sbjct: 728 PWDNLKFDIEGVKEVSRRFFGTLKNTYSFFATYANLDGFNYSQAEVPIAQRPEIDRWILS 787

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVL 448
             + +++++     +    +A   + +       + Y   +  + W+ K  +   A+   
Sbjct: 788 KLNTLIKQVDGFYDDFEPTKAARAIQTFTMDDLSNWYVRLNRNRFWKTKLNDDKVAA--Y 845

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
                 +  +  L    +P ++  +F
Sbjct: 846 QTLYTCLETILKLASPVMPFMSEALF 871



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 36/131 (27%), Gaps = 12/131 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++           N  P I H     I D+  R+  L G  V    G D HG  +   
Sbjct: 36  EGQKTFTFYEGPPSANGMPGIHHVMARTIKDIFCRYKTLKGFQVKRKAGWDTHGLPVELK 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +     TK  + +             IS +D+ +   K       I  K     G    
Sbjct: 96  VEQQLGITKDDIGK------------KISVEDYNKECRKTVMQFTDIWSKLTQKMGYWVD 143

Query: 122 GCYSGWYSLRD 132
                     D
Sbjct: 144 MGNPYITYHND 154


>gi|76808938|ref|YP_334822.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|76578391|gb|ABA47866.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 913

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 80  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 139

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 140 MANGVPPAQWTYENIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 199

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 200 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 255

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 256 DGLGWPERVKVMQHNWI 272



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 672 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 731

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 732 FANREALAVRAPFD-----AAQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 786

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                     +   V  E    L  +L   VP +  +++  L  A
Sbjct: 787 LNAI----------------EGAKGSTPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 830

Query: 481 DE 482
           DE
Sbjct: 831 DE 832


>gi|297250326|ref|ZP_06864102.2| leucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839199|gb|EFH23137.1| leucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 878

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKHNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 18/194 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++          +  
Sbjct: 635 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAHR--FLRRLWR 692

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
            V   +    K       +    ++  + +       + ++ ++  + Q  + A+A V+ 
Sbjct: 693 TVYEYLKQ-GKAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAAVME 751

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L   +++Y          KT+         V  EV+     LL   VP +   ++  L  
Sbjct: 752 L---LNQY---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNG 798

Query: 480 AD-ENRCFQSLDQR 492
           A      +  +D+ 
Sbjct: 799 AKLWEAGWPEVDEA 812


>gi|56752183|ref|YP_172884.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|60390662|sp|Q5N006|SYL_SYNP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56687142|dbj|BAD80364.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 865

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y  +   YP+   H+GH     I D +AR  R  G  VL   G D  G     AA
Sbjct: 47  DRPKFYALSMFPYPSGNLHMGHVRNYTITDAIARVKRRQGFRVLHAMGWDAFGLPAENAA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + GV    +  QN    R+    L +SY  D  + T    ++   + L+ +  + G  Y
Sbjct: 107 IDRGVQPADWTYQNVAQMREQLKQLGLSYDWDREVTTCSPDYYRWTQWLFLQFFEAGLAY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V   ++G+ + +    V+  + + +F +++ Y ++LL   
Sbjct: 167 QKEATVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERRQLKQWFLKITDYAEELLQDL 223

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +           +G
Sbjct: 224 DQLTGWPERVRLMQANWIGKSTG 246



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 99/299 (33%), Gaps = 69/299 (23%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y   +         K   W P D +V G +    H +Y   F   
Sbjct: 508 DTMDTFMCSSWYYLRYSDASNPEIAFTKDKVNDWLPVDQYVGGIEHAILHLLYSRFFTKV 567

Query: 280 ------LSANLPLP-------------------KKVFSHGFILHK--------------G 300
                 LS + P                     K V S                      
Sbjct: 568 LRDRGLLSFDEPFKRLLTQGMVQGLTYKNPKTGKYVPSDRISDPSQPVDPDTGDRLEVFF 627

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  V++  G D  R F++ +    KD  +D   ++         G   
Sbjct: 628 EKMSKSKYNGVDPARVLDRYGADTARMFILFKAPPEKDLEWDDADVE---------GQFR 678

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVIS 419
            ++R   ++ +    +  T  A  ++++ +       +Q   E+++    ++ A+A+++ 
Sbjct: 679 FLNRVWRLV-QTASQVEATTAADDKAEKDLRRAVHTAIQAFTEDLEEDYQLNTAIAELMK 737

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           L + ++   DA  P      +P     V          L +LL  F P +A +++  L 
Sbjct: 738 LTNALN---DAPMP-----GSPAYLKGVQ--------TLVLLLAPFAPHIAEELWQQLG 780


>gi|241667415|ref|ZP_04754993.1| valyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254875964|ref|ZP_05248674.1| valyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254841985|gb|EET20399.1| valyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 919

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 134/394 (34%), Gaps = 82/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLAEDVTIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDR 443
           + I SV +    ++  ++ N         +  LV     D Y +  K   LK    +  +
Sbjct: 646 KWIWSVLNTATADVHRHIANYRFDLVANTIYDLVWNNYCDWYVEFAKV-TLKDESLSEQQ 704

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + V Y   +V+  +  L    +P +   I+  L
Sbjct: 705 KNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                   +K++  +       +   R +    D   + F  T +   
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKIWEWKELSGGTITSQMRRIGASPDWDRERF--TMDDGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            D  +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E
Sbjct: 153 SDAVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVADSDE 212

Query: 163 E 163
           +
Sbjct: 213 K 213


>gi|83594960|ref|YP_428712.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123739388|sp|Q2RN70|SYL_RHORT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83577874|gb|ABC24425.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 862

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     A
Sbjct: 32  RTRPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARFKRAQGFNVLHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  QN    R+    + +S D    + T E  ++   + ++      G  
Sbjct: 92  AIQRGVHPATWTRQNIAIMREQFKPMGLSIDWSREVSTCEPAYYRHEQKMFLDFLKAGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   +     +++V  G           PV+  +   +F R++ Y + LL+ 
Sbjct: 152 YRRESWVNWDPVEHTVLANEQVIDGKG----WRSGAPVERRKLSQWFLRITRYAEDLLAA 207

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                 +   +            G
Sbjct: 208 IGDLDRWPDKVRLMQTNWIGRSEG 231



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/380 (13%), Positives = 108/380 (28%), Gaps = 78/380 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSG----LKD 206
           V       +      Y    +          +P+          E ++F K G       
Sbjct: 421 VVQFRLRDWGVSRQRYWGCPIPIIHCDDCGPVPVPEDQLPVLLPEDVTFDKPGNPLDHHP 480

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-----FWPADLH 261
                     G     +       + +  + Y        + D +  +     + P D +
Sbjct: 481 TWKHVACPQCGKPARRETD-TFDTFFE-SSWYFARFCAPHDTDRAFEREAVDYWLPVDQY 538

Query: 262 VIGKDILRFHAIYWP--------AFLLSANLPLP----KKVFSHGFILH----------- 298
           V G +    H +Y             L  + P      + +  H                
Sbjct: 539 VGGVEHAVLHLLYSRFFTRALRDCGYLGVSEPFTGLFTQGMICHETYRDTDGAWLSPDQI 598

Query: 299 --------------------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                               + EK+SKS  N +DP  ++E  G DA R F++ +    +D
Sbjct: 599 DKAADGTATLLSDGSPVSVGRSEKMSKSKMNTVDPTAILESYGADAARLFMLSDSPPDRD 658

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +   G++          IG L   ++   +       P P        +++    + +
Sbjct: 659 MDWTDSGIEGAW-----RYIGRLWRMALQPQIDPGAVGAPLPADLGPGAAALVRHVHKAV 713

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             + ++++    + A+A++  L + +                   A  V    +E     
Sbjct: 714 AGVTDDLEKFRFNAAVARLRELTNAI----------AALDGKEAGAGAVYRFALE---TA 760

Query: 459 AILLQAFVPKLANKIFDILF 478
           A L    +P +A +++  L 
Sbjct: 761 ARLAAPMIPHIAEEMWSHLG 780


>gi|297170410|gb|ADI21442.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_10G19]
          Length = 803

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 30  DQKKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMRGFNVLQPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  + + ++N  N +     L  SYD    ++T +  ++   + ++  + D G +Y
Sbjct: 90  IQNKVDPQTWTEKNIANMKLQLKQLGFSYDWTKELKTCDPNYYRWEQEMFTLLQDNGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G   +        V+  E + +F +++ Y D+LL   
Sbjct: 150 KKKSLVNWDPVDKTVLANEQVIDGKGWRSGAT----VELKEIDQWFLKITDYADELLQSI 205

Query: 181 ESHPEFILPIERRNEVI 197
           ++          +   I
Sbjct: 206 DNLDWPENVKLMQKNWI 222



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 97/248 (39%), Gaps = 31/248 (12%)

Query: 251 SKAKFW-PADLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEK 302
             +++W P D+++ G +    H +Y            L       KK+ + G +L  G K
Sbjct: 499 ENSEYWLPVDIYIGGIEHAILHLLYSRFFHKAMRDMGLVNGDEPFKKLLTQGMVLKDGTK 558

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGN 360
           +SKS GN +DP + I+  G D +R +++      +   +    ++   R          N
Sbjct: 559 MSKSKGNTVDPQKYIDHYGADTIRLYMMFTAPPEQSLEWSDSAIEGASRFLKKFWRLCEN 618

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            ++     I +D+                + +     ++++  + +++   +  +A ++ 
Sbjct: 619 RINTDYQNIPRDFQQSHLD----------LRAKTHNTIKKVTTDYEDRNSFNTVIAAIME 668

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++ +        P E K +  +  +T ++   EVI     +L   VP +   I+     
Sbjct: 669 LINAI--------PEEFKSS--EATTTDIFCLNEVINVSLQMLSPIVPHITFDIWARFNP 718

Query: 480 ADENRCFQ 487
             + + F+
Sbjct: 719 HLDPKLFE 726


>gi|260548968|ref|ZP_05823190.1| valyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260408136|gb|EEX01607.1| valyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 959

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 438 GHRIPAWYDADGNIYVGRSEDEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWPE 497

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 498 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 556

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 557 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 616

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 617 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGQQARPD 674

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 675 LWELPEQWIMSRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 734

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 735 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 773



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGVTRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|307943449|ref|ZP_07658793.1| leucyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307773079|gb|EFO32296.1| leucyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 895

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 60  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 119

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +  +N    RD    + +S D      T +  ++   + L+ K  + G +Y+
Sbjct: 120 QNKVHPRDWTYENIATMRDQLKSMGLSLDWSREFATCDVEYYTQQQNLFLKCLEAGLVYR 179

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S Y + LL   E
Sbjct: 180 KKSKVNWDPVDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISDYSEDLLEAIE 235

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +    +       GL+  
Sbjct: 236 TLDRWPDKVRLMQKNWIGRSEGLRVR 261



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 123/400 (30%), Gaps = 84/400 (21%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            + E   N      G   Q Y     PV   ++ G            L       +   P
Sbjct: 447 PQGERQVNYRLRDWGISRQRYWGCPIPVVHCDDCGVVPEKEENLPVELPSDIDFEKPGNP 506

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           ++R                      + G     +    M  ++D  + Y           
Sbjct: 507 LDRHPT------------WRDVACPNCGKPAKRETD-TMDTFVD-SSWYFARFTAPRCSQ 552

Query: 250 GSK----AKFWPADLHVIGKDILRFHAIYWPAFLLSANL-------PLPKKVFSHGFILH 298
            ++      + P D ++ G +    H +Y   F  +             K +F+ G ++H
Sbjct: 553 PTEPQTATDWLPVDQYIGGIEHAILHLLYSRFFTRAMQEVGALDLKEPFKGLFTQGMVVH 612

Query: 299 KG---------------------------------------EKISKSLGNVIDPIEVIEE 319
           +                                        EK+SKS  N IDP ++I+ 
Sbjct: 613 ETYKSEDGAWLSPADITISEADGARSAVHSETGKPVAIGSIEKMSKSKKNTIDPTDIIDT 672

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
            G D  R+F++ +    +D  + ++G++         G    V R   +I    +     
Sbjct: 673 YGADTARWFMLSDSPPERDVIWTEEGVQ---------GAWRFVQRVWRLIGDISEIEQTG 723

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
           TP   + +   +     + L  +  +++    +R +A+   LV+++ +         L  
Sbjct: 724 TPADASGAALDLRKATHKTLDAVTHDLEMLGFNRVIARSYDLVNQISK--------VLNG 775

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + D   +      E  R L  ++   +P LA + +  L 
Sbjct: 776 KDNDAGRSA--ALHEAARFLVQIIAPVMPHLAEECWQALG 813


>gi|289663245|ref|ZP_06484826.1| leucyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 764

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+   H+GH     I+DV++R+ R+ G +VL   G D  G     A
Sbjct: 55  SDKPKFYCLSMLPYPSGALHMGHVRNYTISDVVSRYKRMTGHNVLQPMGWDAFGLPAENA 114

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N  + R     L   I +     T    ++   + ++ ++  KG  
Sbjct: 115 AIKNKTAPAKWTYANIAHMRAQLKSLGYAIDWSREFATCTPDYYVHEQRMFTRLMRKGLA 174

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E   +F R++ Y  +LL  
Sbjct: 175 YRRNAVVNWDPIDQTVLANEQVIDG----RGWRSGAVVEKREIPQWFLRITDYAQELLDG 230

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++           GL+     R T    +    DP  +     D L  
Sbjct: 231 LDQLDGWPDSVKTMQRNWIGRSEGLEIQFDVRDTNGAAL----DPLRVFTTRPDTLMG 284



 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 44/111 (39%), Gaps = 10/111 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
           EK+SKS  N +DP  ++ + G D +R F +      +   +++ G+    R    L   +
Sbjct: 658 EKMSKSKNNGVDPQSMVAKYGADTVRLFSMFAAPPEQSLEWNEAGVDGMARFMRRLWVQV 717

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
              V    +++L           A +   +++       + ++ ++   + 
Sbjct: 718 HKHVGEGAAVVL--------DVAALSAEQKAVRRKTHETIGKVSDDYGRRH 760


>gi|302873260|ref|YP_003841893.1| isoleucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688573|ref|ZP_07631019.1| isoleucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576117|gb|ADL50129.1| isoleucyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 1035

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 110/275 (40%), Gaps = 8/275 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+ +       Y         + +PA       D     F+ +   + L+    
Sbjct: 512 VIDCWFDSGSMPFAQLHYPFENKELFEQNFPAQFISEAVDQTRGWFYTLSAISTLIFDRN 571

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                +     +  KG K+SKS GNV+ P +V++ VG DA R+      A      + K+
Sbjct: 572 AFENCIVLGHVLDKKGLKMSKSKGNVVAPNDVLDTVGADATRWHFYTSSAPWLPTRFSKE 631

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRE 403
            + +     L+          +   L ++D     +  +    D+ ILS  + +++ + +
Sbjct: 632 DVAETQRKFLSTLWNVYSFYVLYADLDNFDATKYESHKSDNVMDKWILSKLNTLIKSVED 691

Query: 404 NMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++    + +A  ++ + V E+ + Y   +  + W  + T     +       +V+  L+ 
Sbjct: 692 HLDGYRLTQAALELENFVDELSNWYVRRNRARYWTTELTEDKIGA--YTTLYKVLVTLSK 749

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +   FVP +  +I+  L V+ ++   +S+   + P
Sbjct: 750 ISAPFVPFMTEQIYQSLVVSLDSNAVESVHLCIWP 784



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH     I D++ R+  + G  V+   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHVLTRSIKDLIPRYKVMKGYKVIRKAGWDTHGLPVELE 95

Query: 62  AQNAGVT-----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + + +M+  +   +  ++   T    +
Sbjct: 96  IEKKLGISGKSDIEKHGVEDFVKLCKESVFTYVKMWEEMSTKIGYWVDMENPYVTYHNSY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     +++ DK  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALRQMWDKELLYKGHKVMPYCPRCGTSLSSHEVAQGYK 199


>gi|90108433|sp|Q7UXH9|SYV_RHOBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 1035

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 105/314 (33%), Gaps = 62/314 (19%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +  DP  ++  W  +     +T G+        AKF+P    +  +DIL      +    
Sbjct: 534 LQQDPD-VLDTWFSSALWPHSTLGWPAQTP-ELAKFYPTATLITSRDILTLWVARMVLMG 591

Query: 278 FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 +P   +VF H  IL   GE +SKS GN +DPI+VI++ G DALR+ L R     
Sbjct: 592 LNNVGEVPF-SEVFIHPKILDGLGETMSKSKGNGVDPIDVIDKFGPDALRFGLARLATET 650

Query: 337 KDGF----------------------------------YDKDGLKKR------------- 349
           +D                                    +     +               
Sbjct: 651 QDVRMPVQYECPSCEKLIDQTKKNRALPSMDCPACGKPFSTQWAETEADKSLPKAAVVSE 710

Query: 350 ---VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 +  N + N  SR V M L  ++       +    D  +LS  S V Q + + ++
Sbjct: 711 RFETARNFVNKLWN-ASRFVMMNLDGFEPTSLDVASLPIEDRWLLSRLSTVTQTVGDAIE 769

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 A   +     +     Y +  KP     ++  +      V    + QL  LL  
Sbjct: 770 RYQFGEAARVLYDFAWDEFCSFYVEIAKPRL---SDDSQRQIAQNVIAHGLDQLLRLLHP 826

Query: 465 FVPKLANKIFDILF 478
            +P +   +++ L 
Sbjct: 827 IMPFVTESVWNHLG 840



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK---- 57
             +    +           H+GH     + D++ R  R+ G + L+  GTD  G      
Sbjct: 33  SSKPPFSVVIPPPNVTGALHLGHGLNNTLQDIVVRRKRMQGFETLWMPGTDHAGIATQAV 92

Query: 58  IAKAAQNAGVTT-------------KVFVDQNSRNFRDMADVLDISYDDF-IR-TTEKRH 102
           + +  +     T               + DQ           +  S D   +R T +   
Sbjct: 93  VERRLKEQEDKTRHDLGREALVDRIWQWKDQYEERIIGQLKRMGTSCDWERLRFTLDPIC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               R  +  +  K  IY+G     +    +   +DDEV+      ++     PV   + 
Sbjct: 153 AAAVRATFFDLFGKRRIYRGKRLVNWDTFLQTAVSDDEVFNETKKGHFYHFRYPVIDPKP 212

Query: 163 EGYFF 167
               F
Sbjct: 213 GEPEF 217


>gi|159031023|emb|CAO88726.1| leuS [Microcystis aeruginosa PCC 7806]
          Length = 850

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 29  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + DQN    +     L   I ++  + T    ++   + L+ +  + G  Y
Sbjct: 89  IERGVPPAKWTDQNIAQMKRQLQQLGLSIDWEREVATCSPEYYRWTQWLFLQFFESGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V          A+   V+      +F +++ Y ++LL+  
Sbjct: 149 QKEAAVNWDPIDQTVLANEQVDSEGKSWRSGAK---VERKLLRQWFLKITDYAEQLLTDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 206 DKLSGWPERVKTMQANWIGKSVG 228



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 123/378 (32%), Gaps = 83/378 (21%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKDLSLSRKT 213
                +      Y    +          +P+   N      E + F   G   L+     
Sbjct: 414 YRLRDWLISRQRYWGCPIPVIHCPNCGTVPVPIDNLPVTLPENVEFSGRGASPLAKLEDW 473

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
            +        P       M  +ID+      Y             K   W P D +V G 
Sbjct: 474 VNVDCPRCGTPAKRETDTMDTFIDSSWYFLRYTDAKNVNIPFQFEKVNDWMPVDQYVGGI 533

Query: 266 DILRFHAIY---------------------------WPAFLLSANLPLPKKVFSHGFILH 298
           +    H +Y                               L   N    K V +   I  
Sbjct: 534 EHAILHLLYSRFFTKVLRDRGLVNVDEPFNRLLTQGMVQGLTYKNPETGKYVPAENVIYK 593

Query: 299 KGE---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           + +               K+SKS  N +DP++V+E+ G D  R F++      KD  ++ 
Sbjct: 594 EDKYYDKDTGEVLSFFFEKMSKSKYNGVDPLKVLEKYGADTARMFILFTAPPEKDLQWED 653

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++ +          N V R VS  +++    +     F+++D+ +  V    ++EI E
Sbjct: 654 AGVEGQFR------FLNRVWRLVSEYIENKPKQVKKIETFSKTDKDLRRVIHTAIKEISE 707

Query: 404 NMQ-NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +++ +   + A+++++ L + +  ++ F                     +  E I  L I
Sbjct: 708 DLEGDYQFNTAISELMKLSNALGDNKCF------------------ASPIYREGIETLLI 749

Query: 461 LLQAFVPKLANKIFDILF 478
           LL  F P L+ +++  L 
Sbjct: 750 LLSLFAPHLSEELWQALG 767


>gi|134294734|ref|YP_001118469.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166230620|sp|A4JBI1|SYL_BURVG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134137891|gb|ABO53634.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 864

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 117/358 (32%), Gaps = 41/358 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    + EA+ N      GA  +      +   +++   YF R +A     +       
Sbjct: 467 TGNPLAKSEAFLNCTCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDADTMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETYY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D  R       A                  +L   EK+S
Sbjct: 580 REDATGKKTWYNPADVTVTHDDKGRPVGATLNADG-------------QPVVLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++               +R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGAGNR 686

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
                   +D       +  ++D+++      VL++   + Q    +  ++  + +++ +
Sbjct: 687 EALAARAGFD-----AASLGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKMLNAI 741

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D                        V  E    L  +L   VP +  +++  L  ADE
Sbjct: 742 DG----------------AKGATPGVLRETYGVLLRVLYPVVPHVTFELWKALGYADE 783


>gi|253576149|ref|ZP_04853481.1| isoleucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844492|gb|EES72508.1| isoleucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 1031

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 72/464 (15%), Positives = 156/464 (33%), Gaps = 35/464 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +       + F +  +  G+        AG   K       +   +   +          
Sbjct: 324 YRTCRENGITFVSVVNGQGRYTDVVTDFAGRFVKDCDLDIVKMLSEQGTLY--------- 374

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL--RDEAYYNDDEVYKGA----DGQYY 150
              K  ++       +       Y        +   +D+   N++ V        +G++ 
Sbjct: 375 --SKEKYEHSYPFCWRCKSPLLYYAMESWFIETTAVKDQLIANNNSVDWYPGHVREGRFG 432

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGL 204
                 V W      ++                    +   R +      E +   K  +
Sbjct: 433 KFLEELVDWNISRNRYWGTPLNVWVCPDCGGQFAPHSIAELREHAVGHVSEDLELHKPYV 492

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            ++ +     + G+   +    ++ VW D+ +       Y      + A+ +PAD+   G
Sbjct: 493 DEVKVHCPHCEGGV--MERTSEVIDVWFDSGSMPFAQHHYPFENQETFAEQFPADMICEG 550

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F+++   + L +   P    + +   +   G+K+SKS GNVIDP E+I E G 
Sbjct: 551 IDQTRGWFYSLLAVSTLFTGKAPYKAVIATGHVLDENGQKMSKSKGNVIDPWEIINEFGT 610

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           DA R+ L+ + A      + K G+     + + + + N  + +   +    DG  P   A
Sbjct: 611 DAFRWALLSDSAPWNSKRFSK-GIVAEAKSKVVDTLVN--THAFLTLYAGIDGYKPEEHA 667

Query: 383 FTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELK 437
           +  S    D  ILS  + ++Q + + +       +   +   + E+ + Y    +     
Sbjct: 668 YRPSENKLDRWILSRLNSLIQVVDKGLAVNDFVNSSQAIEGFIDELSNWYIRRSRDRFWG 727

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +   +       V+  ++ ++  F P +A  IF  L   +
Sbjct: 728 SGLNEDKLSAYQTLTHVLLTVSKVIAPFAPLIAEDIFTNLGGGE 771



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R            N  PHIGH    +I D + R+  + G  V+   G D HG  +    
Sbjct: 36  GRPNYVFFEGPPTANGLPHIGHVLGRVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       K  V    + +R+  + +   +  DD   T    + 
Sbjct: 96  EKELGISGKQEIEKYGIEEFVKKCKDSVFGYEKQWREFTEAIAYWVDLDDPYITLNNSYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   +   I DKG +Y+G     Y    +   +  EV +G +
Sbjct: 156 ESVWNILATIHDKGLLYRGHRVSPYCPCCQTSLSSHEVAQGYE 198


>gi|67469347|ref|XP_650652.1| valyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56467298|gb|EAL45265.1| valyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 1050

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 87/534 (16%), Positives = 170/534 (31%), Gaps = 92/534 (17%)

Query: 36  RFHRLDGLDVLFTTG-------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+ +  G  V             D+    +        VT     +  +   R    +++
Sbjct: 347 RYKKYHGWSVRHPFNGKILPIIEDDELVDMEFGTGCVKVTPAHDPNDYNVAIRHKLKIIN 406

Query: 89  ISYDDFIRTTEKRHHDTC--------RILWKKISDKGDIYKGCYSGWYSLRDEAYYN--D 138
           I  DD   T  +   +            + +K+ +KG       S          ++  +
Sbjct: 407 ILNDD--GTMNQECGEFAGMKRFECREAVIEKLKEKGLYKGVKASAMRVPICSRSHDIIE 464

Query: 139 DEVYKGADGQYYNAQHNPVQ----------WMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
             +         N     V+            E E  ++R            +      +
Sbjct: 465 PRIKPQWWVNCKNMARRAVEAVRKGELKMYPSEMENVWYRWLENIHDWCISRQLWWGHRI 524

Query: 189 PIE--RRNEVISFVKSGLKDLSLSRKTFDW-------------GIKIPDDPQYIMYVWID 233
           P    +  +     +  +K+  ++R   +               I++  DP  ++  W  
Sbjct: 525 PAYLIKSKKEKEADEFDMKNWVVARSEEEARKKAAEIKGVNIEDIELKQDPD-VLDTWFS 583

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +  G+ +       K++P +L   G DI+ F    +   +  L   LP  + +F
Sbjct: 584 SGLFPFSVMGWPEQTK-DLEKYFPGELLETGNDIIFFWVARMVMMSLELMDCLPFKEVLF 642

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIE--------------------------------- 318
                  +G K+SKSLGN+IDPI+VIE                                 
Sbjct: 643 HSIVRDAQGRKMSKSLGNIIDPIDVIEGISLKGLNDKLYTYNLPEKECVIAAEGQKKDFP 702

Query: 319 ----EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
               E G DA+R+ L+  +  G D   D + +      +  N + N    S     KD+ 
Sbjct: 703 NGIEECGTDAMRFALLAYMTQGHDINLDINRVVG--YRNFCNKLWNAFKFSTMNFRKDFK 760

Query: 375 GMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
                    T S  D+ IL   + ++  +++  ++     A   + S       D Y +A
Sbjct: 761 AQETFEIKKTNSRLDQWILHRLNVMITSVQQWFKSYEFGNATQAIYSFWLYDFCDVYLEA 820

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            K    +  + +R      V   VI     +L  F+P +  +++  L   ++  
Sbjct: 821 SK-GIFRGPDNERRRAAEEVLYNVIEIGLRVLHPFMPFITEELWQRLPRRNDKE 873



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K  +         + H+GHA    I D + R+HR+ G + L+  G D  G      
Sbjct: 121 RSGKKFVMVIPPPNVTGKLHLGHALTNSIQDTIVRYHRMKGDETLWVPGVDHAGIATQVV 180

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + D+  +   +    L  S D    + T +++ 
Sbjct: 181 VEKKLMREQGVTRHDIGREKFLEEVWKWKDEYGKGICNQLRRLGSSLDWSREVFTMDEKR 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +  +  + +  +KG +Y+      +    +   +D EV  
Sbjct: 241 GEAVKEAFCRFYEKGLLYREQKLVNWCCTLKTAISDIEVEY 281


>gi|242310533|ref|ZP_04809688.1| valyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522931|gb|EEQ62797.1| valyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 887

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 138/388 (35%), Gaps = 59/388 (15%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +    E YK   G  Y    N V+    + +F +       +     +   F  P 
Sbjct: 338 QETGFIEKIEDYKNQVGHCYR-CGNVVEPYISKQWFLKKEIAAKAIEKINANQSNFFPPQ 396

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI-----------------------------P 221
            + N   +     L+D  +SR+   WG +I                              
Sbjct: 397 WKNN--YNAWMKELRDWCISRQ-LWWGHQIPVFYCDSCSNKWASAKTQLQCPKCQSTNIH 453

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH-- 271
            DP  ++  W  +     +T GY +                F+P  L + G DIL F   
Sbjct: 454 QDPD-VLDTWFSSALWAFSTLGYGNGKWGEGTLWQKDDLQNFYPNSLLITGFDILFFWVA 512

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +          LP P            G+K+SKS GNV+DP+E+IE+   D LR+ L  
Sbjct: 513 RMLMMGEHFLLELPFPNIYLHALVRDENGQKMSKSKGNVVDPLELIEKYSADVLRFTLAT 572

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D     + L+   N    N + N  +  + +  + +  +       T   + + 
Sbjct: 573 LCAQGRDVKLSSNQLEISKN--FTNKLYN-ATNFLLLNAQKFPNLSDIQTPKTPLGKYMA 629

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
            + S+ +QE+ +++++   +     +   +     D   +  K             ++L 
Sbjct: 630 ELLSKTIQEVHQHLESYRFNDGANALYRFLWGEFCDWGIEFSK---------ADKDSILE 680

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   + ++  +LL  ++P ++  ++  L
Sbjct: 681 LGA-IFKESMLLLHPYMPFISEYLWHKL 707



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   I           HIGHA    + D++ R+ R+ G   L+  G D  G      
Sbjct: 45  KANKNFCIMLPPPNVTGSLHIGHALNHTLIDIIVRYKRMQGFKTLWQPGLDHAGIATQNV 104

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +        +  R +      S   F  T ++ 
Sbjct: 105 VEKQLLAQGIKKEEIGREAFIQKVWAWKEQSGGMILKQMRKLGSSPAWSRTRF--TMDEG 162

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             +  + ++ K+ ++G I +  Y   +   D A  + +  YK  +G+ Y
Sbjct: 163 LQNAVKEVFVKLYNEGLIIQDKYLVNWCTHDGALSDIEVEYKENNGKLY 211


>gi|221055079|ref|XP_002258678.1| trna ligase [Plasmodium knowlesi strain H]
 gi|193808748|emb|CAQ39450.1| trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 727

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 78/251 (31%), Positives = 133/251 (52%), Gaps = 10/251 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRL-----DGLDVLFTTGTDEHGQKIAKA 61
            ++ST + Y N +PHIGHAY  +++D++ RF +          V+  +G DEHG KI + 
Sbjct: 144 YFVSTPVYYANDKPHIGHAYCNVLSDIICRFAKWEYTEGRRKRVILFSGMDEHGLKIERK 203

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           ++   + +  +++  S  ++ M D L +  + F RTT + H    + +WK ++  G IYK
Sbjct: 204 SKKLKIPSMEYINNMSSYYQMMNDKLHVHVNIFYRTTSQFHKSFVQQVWKYLTQNGYIYK 263

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
           G Y G+Y + +E Y N+ E+ +           N +   EE  YFF +  ++  L  +Y+
Sbjct: 264 GTYRGYYDVNEEKYLNEFELKQKEK-----NDPNILYIEEENSYFFNILKFKKFLTDFYQ 318

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
              E I P   + E++ FV   LKD+ +SR    WGIKIP + +  +YVW DAL +Y+++
Sbjct: 319 RSDELIYPSYLQKEMLHFVNHELKDVCISRYNTQWGIKIPGEEKGTIYVWFDALLSYVSS 378

Query: 242 TGYLDNPDGSK 252
             Y+      +
Sbjct: 379 VLYMVKKRQLR 389



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 2/230 (0%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
              K W   + VIGKDIL+FH + +   L S NL LP+K+  HG I  +  K+SKS+GNV
Sbjct: 472 LFQKAWNPHVQVIGKDILKFHGVLYICLLQSLNLKLPQKIICHGLIKSENVKMSKSIGNV 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I P +++E+   D +R +        +D  + K+ L +     + N +GNL+ R +S+ +
Sbjct: 532 ISPFDIVEKYDPDIVRLYFFGCANIFEDKNFKKEHL-ESFQLFVRNNVGNLLYRVMSLCM 590

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
            +    I   G     D  I    S + Q++   + N+     L  +++L+ +V+++F  
Sbjct: 591 DNNYKHIYKDGQANFLDSPIFRQSSEMKQKLLILIHNKDFALFLENLMALIKQVNKFFVH 650

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           Q+PW+    +  R + ++Y T+E I+  ++ L   +P++ + I   + + 
Sbjct: 651 QEPWKCT-NDSVRFNQIIYETLEGIKFFSVFLYPIMPQICSSILYNIGLD 699


>gi|171463050|ref|YP_001797163.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692844|sp|B1XT72|SYL_POLNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171192588|gb|ACB43549.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 890

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 7/235 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y  + + YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     A
Sbjct: 36  KKKSKYYACSMLPYPSGKLHMGHVRNYTINDVMARQLRMQGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  AIQNKVPPAKWTYDNIAYMKKQMAAMGLAIDWSREVATCNPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+F ++AY + LLS 
Sbjct: 156 YRKTQVVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPGYYFNITAYAEPLLSG 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                 +   ++   +       G++         D+G  I D   Y+     D 
Sbjct: 212 L-DGLGWPERVKTMQQNWIGKSRGVRFAFKHEIADDYGNFIQDGLLYVFTTRADT 265



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 16/181 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+E G D  R F++      +   +   G+           +  
Sbjct: 644 EKMSKSKNNGVDPQALIDEYGADTARLFVMFAAPPEQQLEWSGAGVDGAS-----RFLRR 698

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +            D     P    ++++ +      +L++   + Q +  +  ++  + +
Sbjct: 699 VWMYFSGQASALRDASDSLPSNLNDAEKELRREVHTILKQANFDYQRRQYNTVVSAAMKM 758

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +       +P +L       A+    V  E +  L  +L   VP L + ++  +  A
Sbjct: 759 LNIL-------EPIKL----DQNAAISAPVLRECLSILLRVLYPVVPHLTHVLWKEVGYA 807

Query: 481 D 481
            
Sbjct: 808 K 808


>gi|71083063|ref|YP_265782.1| leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062176|gb|AAZ21179.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 844

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y      YP+ + H+GH     I DVLAR+  L G +VL   G D  G     A
Sbjct: 29  KTKKKFYCLEMFPYPSGKIHMGHVRNYTIGDVLARYKTLQGYNVLHPMGWDSFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   +  K + + N +  R     L   I +D  I T  + ++   +  +  + DKG +
Sbjct: 89  ARQNNLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDYYKHQQEFFLDLYDKGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   DE    +++V  G   +        V+  +   +FF +S + + LL  
Sbjct: 149 YRKENYVNWDPVDETVLANEQVVDGKGWRSGAT----VERKKLNQWFFNISKFSEDLLQG 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 205 LDALENWPNKVKVMQKNWIGKSFG 228



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/381 (13%), Positives = 116/381 (30%), Gaps = 81/381 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+ + E +             L   E       P++  +    F+  
Sbjct: 422 WGISRQRYWGCPIPIAYDENDQPIKIPRDMLPVKLPEIEKLSNTGNPLDSEDNWKFFILD 481

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G K    +     +        ++     +D          ++           P D ++
Sbjct: 482 GKKYRRETDTLDTFVDSSWYFLRFCSPHNLDRGFTQEEANYWM-----------PVDQYI 530

Query: 263 IGKDILRFHAIYWPAFLLSANLP-------------LPKKVFSHGFILHKGEK------- 302
            G +    H +Y   F+ + +                 + +  H     +  K       
Sbjct: 531 GGVEHAILHLLYSRFFMQALSYKNDDFKLKEPFDGLFTQGMVCHETYKDQNNKWLSPDEV 590

Query: 303 -------------------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                                    +SKS  N IDP  +I+  G D++R F++ +    K
Sbjct: 591 TSEDGKKFYKKDNPSEKIIVGPTESMSKSKKNTIDPENIIKNYGADSVRLFILSDSPPEK 650

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +   G+           +  L S+ +  I  +                 +    +++
Sbjct: 651 DVQWSDQGMLASF--KFVQKLWTLNSKILDKIKNN---------DQGSEGNDLAKFTNQL 699

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           + +I +N++    +  +A    + + + +  D  KP  +KK           + +E  ++
Sbjct: 700 INKITQNLEKFHYNVIVANFYEMYNFLIKEID--KP--IKKE----------ILIENYKK 745

Query: 458 LAILLQAFVPKLANKIFDILF 478
           + I++  F+P  +N+    + 
Sbjct: 746 ILIVMNPFIPHFSNECLSTIN 766


>gi|319901389|ref|YP_004161117.1| valyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319416420|gb|ADV43531.1| valyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 894

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 121/365 (33%), Gaps = 58/365 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 369 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWCISRQ-LWW 426

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 427 GHRIPAYFLPEGGYVVAATPEEALKLAREKTGNPALKPEDLRQDEDCLDTWFSSWLWPIS 486

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               + NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 487 LFDGILNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 546

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++I   G D +R  ++     G D  +D    ++  N      
Sbjct: 547 KLGRKMSKSLGNSPDPLDLIATYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 600

Query: 358 IGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             N +  +  +I   +    +  P A   +     S  + V  E+ +      +  AL  
Sbjct: 601 FNNKIWNAFRLIKGWEVSSEVAMPEAAELAMRWFDSKQNVVAAEVADLFGKYRLSEALMA 660

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P         V   T+     L  LL  F+P +  +
Sbjct: 661 VYKL------FWDEFSSWYLEMIKPAYGQPINKKVYDTTIGFFDNLLHLLHPFMPFITEE 714

Query: 473 IFDIL 477
           ++  +
Sbjct: 715 LWQHI 719



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEH 194


>gi|291562640|emb|CBL41456.1| isoleucyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 1067

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 71/513 (13%), Positives = 152/513 (29%), Gaps = 38/513 (7%)

Query: 2   KEREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQ 56
           + ++  +++ A  Y          HI  A+    A V  R+      D+ F    D  G 
Sbjct: 308 QHKKAYFVTCA-DYVTLTDGTGVVHIAPAFGEDDAQVGRRY------DLPFVQLVDAKGD 360

Query: 57  KIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
              +          VFV +             + ++             C       + +
Sbjct: 361 MTKETPYAG-----VFVKKADPMVLKDLKEKGLLFEAPAFEHSYPFCWRCDTPLIYYARE 415

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--YFFRLSAYQD 174
               K        +R+    N      G  G++ +   N   W       +   L  +Q 
Sbjct: 416 SWFIKMTAVKDDLIRNNNKINWIPESIG-KGRFGDWLENVQDWGISRNRYWGTPLPVWQC 474

Query: 175 KLLSYYESHPEFILPIERRN------EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-- 226
           +    +       L     N      +    +     ++ L R   D  +    D     
Sbjct: 475 ECGKMHCIGSREELKKMSPNYQDVVKKYSKEMDGDKGEVELHRPFIDDVVITCPDCGKEM 534

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
                ++  W D+         Y         K +PA       D     F+++   + L
Sbjct: 535 HRVPEVIDCWFDSGAMPFAQHHYPFENQELFHKQFPAQFISEAVDQTRGWFYSLLAESTL 594

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L    P    +         G+K+SKS GN +DP + ++  G DA+R++     A     
Sbjct: 595 LFNEPPYQNVIVLGHVQDENGQKMSKSKGNAVDPFDALKTYGADAIRWYFYINSAPWLPN 654

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRV 397
            +    + +     +           +   + ++D    T         D+ +LS  +  
Sbjct: 655 RFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDNFDATKYTLEYDKLPVMDKWLLSKLNST 714

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++ + +++ N  I  A   +   V ++ + Y    +     K                + 
Sbjct: 715 VKAVDDDLANYRIPEAARALQEFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALV 774

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            ++      +P +  +I+  L  + +    +S+
Sbjct: 775 TISKAAAPMIPFMTEEIYQNLVRSIDKTAPESI 807



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELEVEKLLGLDGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    + D +  +      D+   T    + ++     K+I
Sbjct: 107 QIEEYGVEPFIEKCKESVWKYKGMWEDFSSTVGFWADMDNPYVTYHDDYIESEWWALKQI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG +YKG     Y  R     +  EV +G  
Sbjct: 167 WDKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|255020636|ref|ZP_05292698.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969872|gb|EET27372.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 823

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 6/187 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ Q H+GH     I D +AR+ R+ G  VL   G D  G     AA
Sbjct: 36  EGEKYYVLAMFPYPSGQLHMGHVRNYSIVDAIARYQRMRGKSVLHPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N  + R     L +SYD      T    ++   + L+ K+ ++G +Y
Sbjct: 96  LKHGVAPAQWTFENIAHMRGQLKRLGLSYDWTREFATCTPEYYRWEQWLFLKLWERGLVY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   +F R++AY D+LL   
Sbjct: 156 QKESTVNWDPVDQTVLANEQVVDG----RGWRSGALVERREIRQWFLRITAYADELLQGL 211

Query: 181 ESHPEFI 187
           E      
Sbjct: 212 EQLQGQW 218



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 39/263 (14%)

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFW---PADLHVIGKDILRFHAIYWPAFLL-------- 280
               + Y       D      A+ W   P D +V G +    H +Y   F          
Sbjct: 501 FVESSWYFARFTCPDAASMLDARAWSWMPVDQYVGGVEHAVLHLLYARFFNRLLRDFGLL 560

Query: 281 ----SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 + P  +++ + G +L  G K+SKS GN +DP E+++  G D  R F++      
Sbjct: 561 PADGRFDEPF-RRLLTQGMVLKDGAKMSKSKGNTVDPQELLDRYGADTARLFILFAAPPE 619

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   +    ++         G    + R   ++        P P   + +   +     +
Sbjct: 620 QSLEWSDSAVE---------GAYRFLQRVWRLVQDYDGEPTPLPAKLSGAARDLRRAIHQ 670

Query: 397 VLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++ +  N++ +   + A+A  + L + + R         +   +P+  +    V  E +
Sbjct: 671 CIERVTFNLEERHHFNVAIAACMELTNTLAR---------VDGKDPELRA----VLGEGL 717

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  +L  F P LA   +  L 
Sbjct: 718 SALVRMLAPFTPHLAEACWMALG 740


>gi|86147554|ref|ZP_01065864.1| valyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834593|gb|EAQ52741.1| valyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 957

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 76/423 (17%), Positives = 143/423 (33%), Gaps = 95/423 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAAPAVKAVEDGEIQFVPKQYENMYFAWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNDGKVYVGRTEEEVREKNNLSPVIVLKQDNDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           + +  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 492 DTEAMKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEDGKAQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMMQPKLAAKIEKATRKTFEDGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--- 378
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMSLSV 667

Query: 379 ---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                  F+ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP
Sbjct: 668 EDRANMEFSLADKWIESQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQS 488
             L K    +     Y  + V+ +   L    +P +   I+  +      V  E    Q+
Sbjct: 728 -VLWKGTEAQQQATRYTLITVLEKTLRLAHPVLPYITESIWQSVKPLVGGVEGETIMTQA 786

Query: 489 LDQ 491
           L Q
Sbjct: 787 LPQ 789



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRH 102
            +                + F+D+                  L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITQQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SAATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGFMWHFRYPL 204


>gi|315452888|ref|YP_004073158.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131940|emb|CBY82568.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 804

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI +   YP+   H+GH     I D LAR++R  G +VL   G D  G     AA
Sbjct: 30  SKSKKYILSMFPYPSGAIHMGHVRNYAIGDALARYYRQVGYNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  K +  +N    R+    L  S+       T +  +    +  + ++ +KG +Y
Sbjct: 90  IQYGIHPKQWTYENISKMREEFKALGFSFSKTREFATCDPNYTKIEQGFFLQMYEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D     +++V +G           PV   +   Y+ +++ Y ++LL+  
Sbjct: 150 QKEAWLNWCPKDHTVLANEQVVEGK----CWRCDTPVVQKQMPQYYLKITKYAEELLAEL 205

Query: 181 ES-HPEFILPIERRNEVISFVKSGL 204
           ++    +   + R  E       GL
Sbjct: 206 KTLEGHWPSQVLRMQENWIGKSQGL 230



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 90/269 (33%), Gaps = 39/269 (14%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--- 278
            D  +    +                     A +   D ++ G +    H +Y   F   
Sbjct: 485 MDTFFQSSWYFLRYATPKELWDTQAFDPQELAYWLSVDEYIGGVEHAILHLLYARFFTKV 544

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L  N P    + + G +L  G K+SKS GNV+ P E++E+ G D  R ++    
Sbjct: 545 LRDLGYLKLNEPFT-CLTTQGMVLKNGAKMSKSKGNVVSPQEIVEKYGADIARLYIHFVA 603

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              K+  ++   L+       A  I     +S    L       PT      +++   + 
Sbjct: 604 PPNKELDWNDKALEGS-----ARFIRRFYEKSF---LAQPHTQRPTLENLNPAEKEARAK 655

Query: 394 CSRVLQEIRENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
               LQ+     +        +  +A  +  ++             L+KT      T   
Sbjct: 656 VHLALQKAHAIFEKKQPGYPFNTLIAACMEALNA------------LEKT------TNPA 697

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  E    L  +L+  +P + ++I + LF
Sbjct: 698 LWSEAYYILTHILEPLIPHVCSEIAERLF 726


>gi|167855206|ref|ZP_02477976.1| valyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853659|gb|EDS24903.1| valyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 954

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARDEAEVRSKYQLNADVALKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMYH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAPH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E R+ +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIQSTFNRTVGEFRDALSQYRFDLAANTIYEFTWNQFCDWYLELTKPVFANG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 731 TDAQKRGA-SQTLVRVLEKLLRLAHPIIPFITEEIWQ 766



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|332176268|gb|AEE11958.1| Valyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 887

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 82/417 (19%), Positives = 149/417 (35%), Gaps = 55/417 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            EA   D E        Y       ++      +F ++S      L         ++P +
Sbjct: 333 KEAGLLDHEEDYNNRVGYSERTDVAIEPKLSMQWFLKMSELAKPALQAVLEDTVQLVPKK 392

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N    +    +KD  +SR+   WG +IP                              
Sbjct: 393 FVNT-YRYWLENIKDWCISRQ-LWWGHRIPAYYLPNGQFVVAATAEEALAKAKQETGDNS 450

Query: 222 ------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFH-- 271
                       +  W  +    ++  G +D  + ++    F+P  + V G DIL F   
Sbjct: 451 LTIEQLSQESDCLDTWFSSWLWPISLFGKIDGSEPTEDLKYFYPTSVLVTGPDILFFWVA 510

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +    +    + P  K   +      KG K+SKSLGN  DPI+++++ G D +R  L+ 
Sbjct: 511 RMIMAGYHFMGDRPFDKVYLTGIVRDDKGRKMSKSLGNSPDPIDLMDKYGADGVRLGLMM 570

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G D  YD+  +++    +  N I N      +  + D    +    A   + E   
Sbjct: 571 ATSAGNDLLYDESLVEQ--GRNFCNKIWNSYRFLKTQSVSD---EVKPDAASLIAMEWFE 625

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S+ +  + E+ +      I  A+  +  LV +     Y +A KP     T+  R   V  
Sbjct: 626 SLLASTMSELDDLFDKYRISDAVTLLYKLVRDDFSGLYLEAIKP--AYGTSMSRK--VYE 681

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
            T+    Q+ ILL  F+P +  +++  +      E+  +  LD  L+    L    +
Sbjct: 682 RTIHYFEQIFILLHPFMPFITEELWQDVAPRQEGESIMYAHLDDTLQADKQLLADME 738



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 40  SKKPYTIIMPPPNVTGVLHMGHMLNNTIQDILIRRARISGYNACWVPGTDHASIATEAKV 99

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
                                    + D+           L +S D + RT    ++   
Sbjct: 100 VEQLAKQGIQKNQLTREDFLKHAWEWTDKYGGIILSQLRRLGVSCD-WSRTAFTLDEERS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++   ++ K+ ++G IY+G     +  + +   +D+EV  
Sbjct: 159 ESVINVFCKLYEEGLIYRGVRVVNWDPKAQTALSDEEVIF 198


>gi|328676292|gb|AEB27162.1| Valyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 919

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLAEDVTIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 KTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLEELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVANTIYDLVWNNYCDWYVEFAK--VALKDDSLSEK 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLSKVLENILALAHPLIPFITESIYQQL 738



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 22/181 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                   +KV+  +       +   R +    D   + F  T ++  
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWERERF--TMDEGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            D  +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E
Sbjct: 153 SDAVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFVYPVADSDE 212

Query: 163 E 163
           +
Sbjct: 213 K 213


>gi|319897045|ref|YP_004135240.1| valyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432549|emb|CBY80909.1| valyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 954

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 140/427 (32%), Gaps = 90/427 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGFMLHK 501
            GF L  
Sbjct: 790 SGFDLEA 796



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 65/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T ++
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|298369585|ref|ZP_06980902.1| leucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282142|gb|EFI23630.1| leucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 878

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL   
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLKDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 635 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 689 RLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 748

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 749 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLETAVRLLWPIVPHICETLWSE 795

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 796 LNGAKLWEAGWPTVDEA 812


>gi|238020722|ref|ZP_04601148.1| hypothetical protein GCWU000324_00612 [Kingella oralis ATCC 51147]
 gi|237867702|gb|EEP68708.1| hypothetical protein GCWU000324_00612 [Kingella oralis ATCC 51147]
          Length = 877

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 6/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV +RF ++ G +VL   G D  G     AA
Sbjct: 31  SKPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKMQGYNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N  V    +   N    +     L  + D    I T    ++   ++L+ K+  KG +Y
Sbjct: 91  INNNVAPAAWTYSNIEYMKQQLKSLGFALDWEREIATCRPEYYRWEQLLFTKLFKKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKLGTVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPMYYFKITDYAEQLLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVK 201
           +           +   I   +
Sbjct: 207 DGLDWPEQVKTMQRNWIGKSR 227



 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 18/205 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F++      +   +   G+         N +  
Sbjct: 632 EKMSKSKNNGVDPQAIIDAYGADTARLFMMFASPPEQSLEWSDSGVAGAHR--FLNRLWR 689

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V   V            +  A + S + +       + ++ ++   +   + A+A V+ 
Sbjct: 690 TVYDFVQQGGAAASKFAGSQNALSGSLKDLRFKLHSTIAKVTDDYDRRQQFNTAIAAVME 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L   +++Y          KT+    +    V  EV+    ILL   VP +   ++  L  
Sbjct: 750 L---LNQY---------DKTDTASDAG-KAVAREVLEAAVILLSPIVPHICETLWAELNA 796

Query: 480 ADENRCFQSLDQRLKPGFMLHKTFD 504
              +  +Q    +  P  ++    +
Sbjct: 797 G--STLWQQAWLQPDPAALVQTEIE 819


>gi|148549871|ref|YP_001269973.1| leucyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148513929|gb|ABQ80789.1| leucyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 906

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 69  GKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 128

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 129 MKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIY 188

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 189 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 244

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 245 DELPGWPEQVKTMQRNWIGKSRGM 268



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE  G D  R F++          +   G++         G   
Sbjct: 664 EKMSKSKNNGVDPQSMIEAYGADTCRLFMMFASPPDMSLEWSDSGVE---------GASR 714

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES---ILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +        +P        D++   I       +++   ++      + A+AQ
Sbjct: 715 FLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQ 774

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+++++ +      + P   + T  DRA     +  E +  + +LL    P +++ ++  
Sbjct: 775 VMTVMNVL-----EKAP---QATEQDRA-----LLQEGLEAVTLLLAPITPHISHALWQH 821

Query: 477 LFVADE--NRCFQSLDQR 492
           L  A    +  + S+D++
Sbjct: 822 LGHAGSVIDAAWPSVDEQ 839


>gi|269302989|gb|ACZ33089.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 1043

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 73/463 (15%), Positives = 145/463 (31%), Gaps = 31/463 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       V      D HG    +  Q  G     ++    +            +     
Sbjct: 332 FLVCKENHVPLVCPVDAHGSFTEEIPQYQG----QYIKHADKEIIKFLKKEGRIF----- 382

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYN 151
                +H T +  +                 +      ++D+    +  ++   +     
Sbjct: 383 -----YHGTVKHRYPFCWRTDTPLIYKAVNSWFVAVEKIKDKMLRANSSIHWVPEHIQEG 437

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL-- 209
                ++   +              +         ++   R  E ++  +          
Sbjct: 438 RFGKWLEGARDWAISRNRYWGTPIPIWKSADGEILVVGSIRELEELTGTQITDIHRHFID 497

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G      P Y+   W D+         Y         + +PAD    G D   
Sbjct: 498 DLNIVKDGKPFHRIP-YVFDCWFDSGAMPYAQNHYPFENQKETEEAFPADFIAEGLDQTR 556

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   + +L         + +   +   G K+SK L N   P  V++  G DALR 
Sbjct: 557 GWFYTLTVISAILFDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRL 616

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           +L+  +    +D  +   G++  +   L      L   +    L  +D        A+TE
Sbjct: 617 YLLHSVVVKAEDLRFSDKGIEGVLKQILLPLTSVLSFFNTYAELYGFDPKSQDIEPAYTE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPD 442
            D+ ILS    V+ ++RE+M    ++ A+   ++ + ++ + Y     ++ WE  +  PD
Sbjct: 677 IDQWILSNLYSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWE-AENTPD 735

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           R         EV+     ++  FVP LA  I+  L +  E   
Sbjct: 736 R-RAAFSTLYEVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPES 777



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +   T   
Sbjct: 47  PPFATGLPHYGHLLASTIKDVVGRYATMDGYYVPRRFGWDCHGVPVEYEVEKSLSLTAPG 106

Query: 73  VDQ------NSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
             +       +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 107 AIEDFGIASFNEECRKIVFRYVHEWEYYINRIGRWVDFSSTWKTMDASFMESVWWVFQSL 166

Query: 114 SDKGDIYKGC 123
            ++G +Y+G 
Sbjct: 167 YNQGLVYEGT 176


>gi|134302608|ref|YP_001122579.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134050385|gb|ABO47456.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 919

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 QTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVTNTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T +K   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDKGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFIYPVADSDEK 213


>gi|154251733|ref|YP_001412557.1| leucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|189030295|sp|A7HSL7|SYL_PARL1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154155683|gb|ABS62900.1| leucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 870

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+ +  G +VL   G D  G     AA
Sbjct: 32  GKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKKARGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +   N    R+    +   I +     T +  ++   + L+  + + G + 
Sbjct: 92  MEKNVHPKGWTYDNIAAMREQLKAIGLAIDWSREFATCDPEYYGHEQALFLDMLEAGLVS 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +F ++S + D+LL   
Sbjct: 152 RKKSMVNWDPVDNTVLANEQVIDG----RGWRSGALVERRELTQWFLKISDFADELLEGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +    +       G
Sbjct: 208 DTLDRWPEKVRLMQKNWIGRSEG 230



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 67/406 (16%), Positives = 126/406 (31%), Gaps = 82/406 (20%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E   N      G   Q Y     PV      G           +L    +  E   P++R
Sbjct: 425 EGTVNYRLRDWGISRQRYWGCPIPVIHCASCGTLPVPRDQLPVVLPDDVNFSEPGNPLDR 484

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
                  V         SR+T  +   +     ++ +   DA T                
Sbjct: 485 HP-SWKHVDCPKCGKPASRETDTFDTFVDSSWYFVRFTAPDAPT---------PTDKALA 534

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILH-K 299
             + P D ++ G +    H +Y   F  +                  + + +H      +
Sbjct: 535 DHWLPVDQYIGGIEHAILHLLYSRFFTRAMKATGHVSLDEPFAGLFTQGMVNHETYRDAE 594

Query: 300 GE---------------------------------KISKSLGNVIDPIEVIEEVGVDALR 326
           G                                  K+SKS  N +DP ++I + G D  R
Sbjct: 595 GRWVPPAEVDIETVSGKRVAKRIADGEPVIIGSVEKMSKSKKNTVDPEDIIAKYGADTAR 654

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGA 382
           +F++ +    +D  +   G         A G      R   M+ +  + + PT    P A
Sbjct: 655 WFMLSDSPPERDVQWTDQG---------AEGAWRFTQRLWRMVTERQEDLAPTGTPMPTA 705

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           F+E + ++     + L    E+ +N   +RA+A+V  L + V  +             P+
Sbjct: 706 FSEDELTLRRAAHQALAAATEDFENLRFNRAVARVYELANAVSGF---------TPGTPE 756

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            A    +   E +  L  ++   +P +A + ++ L   +     + 
Sbjct: 757 GA----FAKREALEILVQIVGPMMPHIAEECWEALGHGEPLTAAEW 798


>gi|218710652|ref|YP_002418273.1| valyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218323671|emb|CAV19986.1| Valyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 957

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 76/423 (17%), Positives = 143/423 (33%), Gaps = 95/423 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAAPAVKAVEDGEIQFVPKQYENMYFAWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNDGKVYVGRTEEEVREKNNLSPVIVLKQDNDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           + +  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 492 DTEAMKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEDGKAQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMMQPKLAAKIEKATRKTFEDGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--- 378
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMSLSV 667

Query: 379 ---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                  F+ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP
Sbjct: 668 EDRANMEFSLADKWIESQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQS 488
             L K    +     Y  + V+ +   L    +P +   I+  +      V  E    Q+
Sbjct: 728 -VLWKGTEAQQQATRYTLITVLEKTLRLAHPVLPYITESIWQSVKPLVDGVEGETIMTQA 786

Query: 489 LDQ 491
           L Q
Sbjct: 787 LPQ 789



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRH 102
            +                + F+D+                  L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITQQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SAATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGFMWHFRYPL 204


>gi|161525901|ref|YP_001580913.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349380|ref|YP_001945008.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687066|sp|A9AHA9|SYL_BURM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160343330|gb|ABX16416.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333402|dbj|BAG42472.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 864

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 120/362 (33%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A   + +       
Sbjct: 467 SGNPLAKSEAFLNCTCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDAETMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETYY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D  R       A                  +L   EK+S
Sbjct: 580 REDAAGKKTWYNPADVTVTHDDKGRPVGATLNADG-------------QPVVLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S    + +           A  ++D+++      VL++   + Q    +  ++  + +
Sbjct: 678 VWSFGYANREALASRAGFDAAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPGVLREAYGVLLRVLYPVVPHVTYELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|56707452|ref|YP_169348.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669923|ref|YP_666480.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456534|ref|ZP_03665007.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370853|ref|ZP_04986858.1| valine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874291|ref|ZP_05247001.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820817|sp|Q5NHZ4|SYV_FRATT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56603944|emb|CAG44932.1| Valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320256|emb|CAL08315.1| Valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569096|gb|EDN34750.1| valine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840290|gb|EET18726.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158596|gb|ADA77987.1| valyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 919

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 QTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVTNTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T +K   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDKGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFIYPVADSDEK 213


>gi|32471355|ref|NP_864348.1| valyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32443196|emb|CAD72027.1| valyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 1040

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 105/314 (33%), Gaps = 62/314 (19%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +  DP  ++  W  +     +T G+        AKF+P    +  +DIL      +    
Sbjct: 539 LQQDPD-VLDTWFSSALWPHSTLGWPAQTP-ELAKFYPTATLITSRDILTLWVARMVLMG 596

Query: 278 FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 +P   +VF H  IL   GE +SKS GN +DPI+VI++ G DALR+ L R     
Sbjct: 597 LNNVGEVPF-SEVFIHPKILDGLGETMSKSKGNGVDPIDVIDKFGPDALRFGLARLATET 655

Query: 337 KDGF----------------------------------YDKDGLKKR------------- 349
           +D                                    +     +               
Sbjct: 656 QDVRMPVQYECPSCEKLIDQTKKNRALPSMDCPACGKPFSTQWAETEADKSLPKAAVVSE 715

Query: 350 ---VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 +  N + N  SR V M L  ++       +    D  +LS  S V Q + + ++
Sbjct: 716 RFETARNFVNKLWN-ASRFVMMNLDGFEPTSLDVASLPIEDRWLLSRLSTVTQTVGDAIE 774

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 A   +     +     Y +  KP     ++  +      V    + QL  LL  
Sbjct: 775 RYQFGEAARVLYDFAWDEFCSFYVEIAKPRL---SDDSQRQIAQNVIAHGLDQLLRLLHP 831

Query: 465 FVPKLANKIFDILF 478
            +P +   +++ L 
Sbjct: 832 IMPFVTESVWNHLG 845



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK---- 57
             +    +           H+GH     + D++ R  R+ G + L+  GTD  G      
Sbjct: 38  SSKPPFSVVIPPPNVTGALHLGHGLNNTLQDIVVRRKRMQGFETLWMPGTDHAGIATQAV 97

Query: 58  IAKAAQNAGVTT-------------KVFVDQNSRNFRDMADVLDISYDDF-IR-TTEKRH 102
           + +  +     T               + DQ           +  S D   +R T +   
Sbjct: 98  VERRLKEQEDKTRHDLGREALVDRIWQWKDQYEERIIGQLKRMGTSCDWERLRFTLDPIC 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               R  +  +  K  IY+G     +    +   +DDEV+      ++     PV   + 
Sbjct: 158 AAAVRATFFDLFGKRRIYRGKRLVNWDTFLQTAVSDDEVFNETKKGHFYHFRYPVIDPKP 217

Query: 163 EGYFF 167
               F
Sbjct: 218 GEPEF 222


>gi|289165660|ref|YP_003455798.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|288858833|emb|CBJ12747.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 824

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N  + +     L  +YD    I T    ++   +  + ++ +KG +Y
Sbjct: 91  IKNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREISTCTPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F +++AY D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITAYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++         +G
Sbjct: 207 DSLDEWPSQVKQMQRNWIGRSTG 229



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 96/270 (35%), Gaps = 32/270 (11%)

Query: 228 MYVWIDALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
              ++++   Y         +     +AK+W P D +V G +    H +Y   F      
Sbjct: 492 FDTFVESSWYYARFACKGQENAMLDDRAKYWTPVDQYVGGIEHAVMHLLYARFFHKLMRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              ++++ P  K + + G +L  G K+SKS+GNV+DP  +I   G D  R F++      
Sbjct: 552 EGLVNSDEPF-KALLTQGMVLKDGHKMSKSVGNVVDPNHLINTYGADTARLFVMFAAPPE 610

Query: 337 KDGFYDKDGLKKRVN-----ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +   +    ++            A    N+ +    +IL     +           +   
Sbjct: 611 QSLEWSDTAVEGAHRFLKRIWYFAYQHQNMFTDINDLILSGNGHVNWQQAESRL--KKSR 668

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  ++L +   +      +  ++  + L +E+  Y          +T  D+     +  
Sbjct: 669 HIVHQILAQATHDYDRNQFNTVVSGCMKLFNELSSY--------SIETEDDK-----FFI 715

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +  L  LL    P + + ++  L    
Sbjct: 716 HSGMSILLRLLAPITPHITHHLWQQLGFEK 745


>gi|84387837|ref|ZP_00990852.1| valyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377352|gb|EAP94220.1| valyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 957

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 76/423 (17%), Positives = 143/423 (33%), Gaps = 95/423 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +      +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRTAPLAAPAVKAVEDGEIQFVPKQYENMYFAWMRD-VQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 432 GHRIPAWYDNDGKVYVGRTEEEVREKNNLSPVIVLKQDNDVLDTWFSSALWTFGTQGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFILH 298
           + +  K    P+++ V G DI+ F         +         A +P      +      
Sbjct: 492 DTEAMKTFH-PSEVLVSGFDIIFFWVARMIMMTMHFVKDEDGKAQVPFKTVYMTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DPI++I+                                       G
Sbjct: 551 NGDKMSKSKGNVLDPIDMIDGIGLEELVEKRCGNMMQPKLAAKIEKATRKTFEDGIEPYG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--- 378
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +++D  +    
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLEG--YRNFCNKLWN-ASRYVLMNTEEHDCGMSLSV 667

Query: 379 ---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                  F+ +D+ I S      +E   ++ N  +  A   +   +     D Y +  KP
Sbjct: 668 EDRANMEFSLADKWIESQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-----FVADENRCFQS 488
             L K    +     Y  + V+ +   L    +P +   I+  +      V  E    Q+
Sbjct: 728 -VLWKGTEAQQQATRYTLITVLEKTLRLAHPVLPYITESIWQSVKPLVDGVEGETIMTQA 786

Query: 489 LDQ 491
           L Q
Sbjct: 787 LPQ 789



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAQRMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRH 102
            +                + F+D+                  L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITQQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ ++  IY+G     +  +     +D EV       +      P+
Sbjct: 150 SAATQEVFVRLYEEDLIYRGKRLVNWDPKLHTAISDLEVENKDKKGFMWHFRYPL 204


>gi|313205325|ref|YP_004043982.1| valyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444641|gb|ADQ80997.1| valyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 878

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 127/347 (36%), Gaps = 22/347 (6%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P ++     ++             +  H      + +   V++  K      +L+   + 
Sbjct: 382 PAKFKNTYRHWMENVKDWCISRQLWWGHRIPAYFLPQGGFVVALSKEEAYQKALAIVNYP 441

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--A 272
             I      +  +  W  +    ++    ++NP+  + K++ P +  V   +IL F    
Sbjct: 442 LSIDDLRQDEDCLDTWFSSWLWPISVFDGINNPENEEIKYYYPTNDLVTAPEILFFWVAR 501

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +    +     +P      +       G K+SKSLGN  DP+++I + G DA+R  ++  
Sbjct: 502 MIIAGYEYRGEMPFKNVYLTGIVRDKLGRKMSKSLGNSPDPLDLIAQYGADAVRLGMLLT 561

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G D  YD    ++  N        N +  +  ++       I  P +   + +   +
Sbjct: 562 SPAGNDLPYDDSLCEQGRN------FNNKIWNAFRLVKGWEVADIEQPESARMAVKWFEA 615

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             ++ L EI +      +  AL  V  L      ++D    W L+   P     +   T 
Sbjct: 616 QLNKTLLEIEDLFSKYRLSEALMAVYKL------FWDEFSSWYLEMAKPAYQKPIDRTTY 669

Query: 453 EV----IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           E        L  +L  F+P +  +++  L   ++ +  +S+   L+P
Sbjct: 670 EATLGFFDSLLKVLHPFMPFITEELWQAL---EDRKDGESIMVALQP 713



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARMQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        +  ++     +    L  S  +D    T ++   +
Sbjct: 92  VGKLAAEGIKKTDLTREEFLSHAWDWTHKHGGIILEQLKKLGASCDWDRTAFTMDEPRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +  +     +D+EV  
Sbjct: 152 SVLKVFADLYEKGLIYRGVRMVNWDPKALTALSDEEVIF 190


>gi|218438831|ref|YP_002377160.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226695251|sp|B7KCI7|SYL_CYAP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218171559|gb|ACK70292.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 854

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  TKPKYYALSMFPYPSGNLHMGHVRNYVITDVIARLKRMQGHRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    R     L +S D    + T    ++   + L+ +    G  Y
Sbjct: 91  IERGIHPAKWTYQNIAQMRQQLQQLGLSIDWSREVTTCSPDYYQWTQWLFLQFFQAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V          A+   V+      +F +++ Y ++LL+  
Sbjct: 151 QKEAAVNWDPVDQTVLANEQVDSEGKSWRSGAK---VERKMLRQWFLKITDYAEQLLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++           G
Sbjct: 208 DKLPGWPEKVKLMQANWIGKSIG 230



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 23/196 (11%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    EK+SKS  N +DP +V+ + G D  R F++ +    KD  +D   +
Sbjct: 600 PKDPETGEPLSVFYEKMSKSKYNGVDPKQVLAKYGADTARMFILFKAPPEKDLEWDDADV 659

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +          N V R V     ++       G+ T+ ++ +       ++EI E++ 
Sbjct: 660 EGQFR------FLNKVWRIVGEYQSNHKSSSKKKGSLTKVEKDLRRAIHIAIKEITEDLD 713

Query: 407 -NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                + A+++++ L    +   DA+        +P        V  E ++ L ILL  F
Sbjct: 714 GEYQFNTAVSELMKLS---NALVDAKCY-----ESP--------VYTEGVQTLLILLAPF 757

Query: 466 VPKLANKIFDILFVAD 481
            P +A +++  L  ++
Sbjct: 758 APHIAEELWHTLGHSE 773


>gi|284048004|ref|YP_003398343.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952225|gb|ADB47028.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 829

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     I DV+ARF  + G +VL   G D  G     AA 
Sbjct: 33  RPKSYVLEMFPYPSGNLHMGHVRNYSIGDVVARFRTMRGFNVLHPIGFDSFGMPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N  N       L +SY  D  + T ++ ++   +  ++ +  +G   K
Sbjct: 93  KHKIPPAKWTMENIANMTRQLKELGLSYDWDRKVVTCQEDYYKWTQWFFELMYKRGLAVK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +         +++V  G         H PV+  +   +FF+++ Y ++LL    
Sbjct: 153 KEASVNWCDTCGTVLANEQVEDGK----CWRCHQPVEKKQLSQWFFKITDYAEQLLDDLA 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
             P +   ++   +       GL
Sbjct: 209 KLPGWPDRVKTMQKNWIGRSEGL 231



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 116/313 (37%), Gaps = 34/313 (10%)

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWP 257
            L+ S +  +        P       +D             +P   KA         + P
Sbjct: 473 PLATSEQFVNCTCPKCGGPAKRELDTMDTFLCSSWYYMRYTDPHNDKAPFSEEAVNHWMP 532

Query: 258 ADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            D ++ G +    H +Y   F+        + A+ P    + + G ++  G K+SKSLGN
Sbjct: 533 VDQYIGGIEHAILHLLYSRFFMKVLHDAGLVKADEPFT-NLLTQGMVIKDGAKMSKSLGN 591

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+ P E++ + G D  R F++      ++  +   G++        N +  +V     ++
Sbjct: 592 VVSPEEIVGKFGADTARLFIMFAAPVERELEWSDQGVEGSFR--FLNRVWRIVYHFKDVL 649

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYF 428
            K             E+DE +  +    ++++ E++      + A++ ++ LV+ +  Y 
Sbjct: 650 AKK--ATSYDTAHLNEADEELRHILHVSVKKVTEDIDQRFNFNTAISTLMELVNALYAYR 707

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  +P                +  E I +L ++L  F P +  +++     ++ +   +S
Sbjct: 708 EKAEPVN------------DGLVYEAISKLLLMLAPFTPHITEELWHDAMGSETSIHKES 755

Query: 489 LDQRLKPGFMLHK 501
                     + +
Sbjct: 756 WPTYDPEAIKVEQ 768


>gi|241760226|ref|ZP_04758322.1| leucine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319337|gb|EER55802.1| leucine--tRNA ligase [Neisseria flavescens SK114]
          Length = 876

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G     ++  + +       + ++ +   + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGNQDGLSKELKDLRHKLHSTIAKVSDEYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 747 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 L-FVADENRCFQSLDQR 492
           L  V      + ++D  
Sbjct: 794 LNGVKLWEAGWPTVDDA 810


>gi|261379368|ref|ZP_05983941.1| leucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797811|gb|EFC53158.1| leucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 876

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 747 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|221202477|ref|ZP_03575508.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208066|ref|ZP_03581071.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171969|gb|EEE04411.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177650|gb|EEE10066.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 864

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 120/362 (33%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A   + +       
Sbjct: 467 SGNPLAKSEAFLNCTCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDAETMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETYY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D  R       A                  +L   EK+S
Sbjct: 580 REDAAGKKTWYNPADVTVTHDDKGRPVGATLNADG-------------QPVVLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S    + +           A  ++D+++      VL++   + Q    +  ++  + +
Sbjct: 678 VWSFGYANREALASRAGFDAAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLREAYGVLLRVLYPVVPHVTYELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|144900375|emb|CAM77239.1| Leucyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 858

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 86/237 (36%), Gaps = 14/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K ++     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 34  SRPKYFVLEMFPYPSGRIHMGHVRNYALGDVVARYKRARGFNVLHPMGWDAFGLPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    R+    + +SYD    + T E  ++   + ++      G +Y
Sbjct: 94  IERGVHPAKWTRENIAAMREQLKSMGLSYDWSRELATCEPEYYRHEQKMFLDFLKAGLVY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   +     +++V  G            V+      +F +++A+ D LL   
Sbjct: 154 RKESWVNWDPVENTVLANEQVIDG----RGWRSGALVEKRLLSQWFLKITAFADDLLDSL 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++   +   +    E       G            W +K  DD   I     D L  
Sbjct: 210 QTLDRWPERVRIMQENWIGRSEG--------ARLTWTLKDRDDSLDIFTTRPDTLFG 258



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 19/184 (10%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L + EK+SKS  NV+DP  +I   G D  R F++ +    +D  + + G+      D A 
Sbjct: 614 LGRSEKMSKSKRNVVDPAHIIATYGADTARLFMLSDSPPERDLEWTEAGI------DGAW 667

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              N + R  ++ +     +        E+   +     + +  + +++     ++A+A+
Sbjct: 668 RYVNRLWRLTALAVDSLPAIGTAMPELGEAATKLRRQVHKTIAAVSDDLDRFHFNKAVAR 727

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  L +             L     + A    +V  E +   A+L+   +P LA +I+  
Sbjct: 728 IRELTNA------------LGDFKAEDAGD-WWVMREGLESAALLIAPMMPHLAEEIWLE 774

Query: 477 LFVA 480
           L  A
Sbjct: 775 LGHA 778


>gi|70732744|ref|YP_262507.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123761979|sp|Q4K5H6|SYL_PSEF5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68347043|gb|AAY94649.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 868

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIAYMKTQLRSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/408 (15%), Positives = 124/408 (30%), Gaps = 91/408 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIIHCDSCGDVPVPQEQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        D + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVDPAAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVSSNEPFKNLLTQGMVIAETYYRREANGSYTWYN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       ++  G        EK++KS  N +DP  +IE+ G D  R F+
Sbjct: 595 PADVELERDSKAKIIGAKLISDGLPVEIGGTEKMAKSKNNGVDPQSMIEQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++         G    + R   +        +P        ++ 
Sbjct: 655 MFASPPDMSLEWSDSGVE---------GAHRFLKRVWRLAQAHVSQGLPGALDIATLSDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            ++I       +++  +++ Q+   + A+AQV++L++ +      + P   + +  DRA 
Sbjct: 706 QKAIRRAIHLAIKQASQDVGQHHKFNTAIAQVMTLMNVL-----EKAP---QGSEQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
               +  E ++ +A+LL    P ++++++  L  +    +  + +LD+
Sbjct: 757 ----LLQEGLQTVALLLAPITPHISHELWGQLGQSGAIIDAGWPALDE 800


>gi|302510571|ref|XP_003017237.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
 gi|291180808|gb|EFE36592.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
          Length = 975

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+   H+GH     I+DVLARF ++ G DVL   G D  G     A
Sbjct: 73  SSKEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENA 132

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  QN  N R+    L I   +D  + T     +   + L+  + +KG  
Sbjct: 133 AIERGIHPEGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLA 192

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  E + +FFR++A+++ LL  
Sbjct: 193 YQAEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKD 249

Query: 180 Y 180
            
Sbjct: 250 L 250



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 15/206 (7%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KR 349
           +        EK+SKS  N +DP   IE  G DA R  ++      +   +D+  +   +R
Sbjct: 664 TQIPANISFEKMSKSKYNGVDPNTCIESYGADATRAHVLFSAPVSEVLEWDETKIVGIQR 723

Query: 350 VNADLANGIG---NLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEI 401
             + +   +    N + R+      D      D  +P  G  +E++ ++L +    +  +
Sbjct: 724 WFSRIWKAVEDTGNSLKRANFSSAPDALSSLNDMALPPLGKLSETESNLLLMTDNTISSV 783

Query: 402 RENMQNQLIHRALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQL 458
              ++       L  VI  L+   +       P E  KT+P   S           +  L
Sbjct: 784 SYCLEKNQYG--LNTVISDLIKLTNAIAAVPLPEESSKTSPSAQSVTPLHTTLYIALNSL 841

Query: 459 AILLQAFVPKLANKIFDILFVADENR 484
             +L    P  A++ +++L +    R
Sbjct: 842 LRMLAPIAPAFASECWEVLHMPLFER 867


>gi|269213745|ref|ZP_05982769.2| leucine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145666|gb|EEZ72084.1| leucine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 878

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 124/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     +      E        +
Sbjct: 487 FYETTCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPQFAEGMVSAEAAKYWGAVD 541

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 542 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 597

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 598 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 644

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 645 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 698

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L+++ D+
Sbjct: 699 KQGGAVKAFAGNQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK 758

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
                       +   RA     V  EV+     LL   VP +   ++  L  A      
Sbjct: 759 --------TDIGSEQGRA-----VAQEVLETAVRLLWPIVPHICETLWSELNSAKLWEAG 805

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 806 WPTVDEA 812


>gi|221213180|ref|ZP_03586155.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221166632|gb|EED99103.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 864

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA
Sbjct: 31  QKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 120/362 (33%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A   + +       
Sbjct: 467 SGNPLAKSEAFLNCTCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDAETMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETYY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D  R       A                  +L   EK+S
Sbjct: 580 REDAAGKKTWYNPADVTVTHDDKGRPVGATLNADG-------------QPVVLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S    + +           A  ++D+++      VL++   + Q    +  ++  + +
Sbjct: 678 VWSFGYANREALASRAGFDAAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLREAYGVLLRVLYPVVPHVTYELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|189219552|ref|YP_001940193.1| Valyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186410|gb|ACD83595.1| Valyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 900

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 63/355 (17%), Positives = 125/355 (35%), Gaps = 24/355 (6%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
            Y      ++ ++++   F  S ++     + ++  ++ +  +        V        
Sbjct: 386 RYPKTTEALEVVKQKIISFFPSYWEKVYEHWIKNIQDWCISRQVWWGHPIPVWWKNGSFV 445

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              ++   G K   D    +  W  +         Y      ++ KF+P D+ V G DI+
Sbjct: 446 CQLESPGEGWKPDPD---TLDTWFSSWLW-----AYETMDVETRKKFYPTDVLVTGPDII 497

Query: 269 RFHAIYWP----------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
                                L  N+P  K  F+      +G K+SKSLGN  DPIE+I 
Sbjct: 498 FLWVARMVIAGLEFKPSQTEDLQQNIPFRKVYFTGLIRDKQGRKMSKSLGNSPDPIELIN 557

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR+ L+R    G+D  +D+  +++    +  N + N   R  + + +      P
Sbjct: 558 KYGADGLRFGLLRIAPQGQDIRFDESQIEE--GRNFCNKLWN-ACRFRNRLGQTNPHPNP 614

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL 436
                +     IL    +    + E       ++A   +   V      ++ +A K WEL
Sbjct: 615 WIHPKSSFSHEILKKVGQTSSLLNEAFDCFEFNQAAITLYEFVWNEFCSKFIEAMK-WEL 673

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                +            +  +   L  FVP +  +++  +     +  F+    
Sbjct: 674 AFDCKETHLGAYETFDYTMSIILRWLHPFVPFVTEELWQKMGFGRSSIQFEKWPG 728



 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 23/161 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I            +GH     I D+L+R  R++G +VL+  G D  G     A
Sbjct: 53  SSKPSFSIVMPPPNITGVLTLGHVLNNTIQDILSRKARMEGKEVLWLPGLDHAGLATQVA 112

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            Q   + TK                  + + +S+   +    L  S D     F  T + 
Sbjct: 113 VQKYLLKTKKIDPQTLSKEEFLKIVWEWKENHSQKILEQLQKLGCSADWQRTRF--TLDA 170

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +       + ++  KG IY+G     +    +   +D+EV
Sbjct: 171 AYSQAVANAFIRLYQKGLIYRGKRMINWCPASQTALSDEEV 211


>gi|53725689|ref|YP_104000.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67643539|ref|ZP_00442284.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121599159|ref|YP_991720.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|166998532|ref|ZP_02264390.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254179000|ref|ZP_04885654.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202719|ref|ZP_04909082.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208060|ref|ZP_04914410.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|60390676|sp|Q62H20|SYL_BURMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230617|sp|A1V0G7|SYL_BURMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52429112|gb|AAU49705.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227969|gb|ABM50487.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|147746966|gb|EDK54043.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751954|gb|EDK59021.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|160694914|gb|EDP84922.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238524907|gb|EEP88337.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243065217|gb|EES47403.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 864

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G   +        V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDGRGWRSGAF----VEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+ +++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEAGKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++ +L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKVLGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|167771410|ref|ZP_02443463.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
 gi|167666050|gb|EDS10180.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
          Length = 945

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 129/397 (32%), Gaps = 35/397 (8%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
             W+            +        E   ++ E              N V+   +     
Sbjct: 418 HCWRCKDPIIYRATEQWFCSVDDIKEQTVSEIEKVAFVPEWGRGRMINMVRDRSDWCISR 477

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------WG 217
           + +      + Y +   ++ +       V +  +    D   +    D           G
Sbjct: 478 QRTWGVPIPIFYCKQCGKYHVNETSIEAVAALFREKGSDAWYTTDAADILPAGTKCAACG 537

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    IM VW D+ T+Y +          +    WPADL++ G D     F +   
Sbjct: 538 CTEFVKETDIMDVWFDSGTSYASVIH------DNPDLKWPADLYLEGTDQYRGWFQSSLL 591

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +       P          +  +G K+SKSLGN ++P E+ ++ G D LR ++      
Sbjct: 592 TSVAWKGVAPYKTVCTHGWVVDGEGRKMSKSLGNGMEPSEITDQYGADILRLWVASADY- 650

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESI 390
             D    KD LK+       + +   +  +   IL +  G  P   A      T  D   
Sbjct: 651 HADIRISKDILKQ------LSEVYRKIRNTARYILGNIAGFTPDKDAVAFDRLTGLDRWA 704

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT-NPDRASTV 447
           L+  + +++ + E       H     + +   +   + Y D  K     +  + +     
Sbjct: 705 LTRFNELVKTVTEAYDRFEFHIIYHALHNFCTIDMSNFYLDVIKDRLYVEAPDSEDRRAA 764

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                 ++R + +L    +P  A +I+   F+ D++R
Sbjct: 765 QSTIYTILRGMTLLFAPIIPFTAEEIWS--FMPDDSR 799



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +          Y NA  H+G A   ++ D++ R   L G    +T G D HG  I   
Sbjct: 59  EGKPLYMFHDGPPYANANIHLGTALNKVLKDIIVRQKNLSGFKAPYTPGWDTHGLPIELK 118

Query: 62  AQNA-----GVTTKV-------FVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
           A         +           F  +   N ++    L    D      T +  +     
Sbjct: 119 ALKEIGVSSDIAPIELRRVCHDFALRFVENQKEQFKRLGTIADYEHPYLTLKPEYEARQV 178

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            ++  +++KG IYKG    ++    E    + E+    D  
Sbjct: 179 EIFGAMANKGYIYKGLKPVYWCPTCETALAEAEIEYNEDKC 219


>gi|124385578|ref|YP_001027213.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450845|ref|YP_001082165.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|166230615|sp|A3MPH9|SYL_BURM7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230616|sp|A2S5J4|SYL_BURM9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124293598|gb|ABN02867.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126243715|gb|ABO06808.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10247]
          Length = 864

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G   +        V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDGRGWRSGAF----VEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+ +++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEAGKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++ +L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKVLGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|327537640|gb|EGF24352.1| valyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 1035

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 104/314 (33%), Gaps = 62/314 (19%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +  DP  ++  W  +     +T G+        AKF+P    +  +DIL      +    
Sbjct: 534 LQQDPD-VLDTWFSSALWPHSTLGWPAQTP-ELAKFYPTATLITSRDILTLWVARMVLMG 591

Query: 278 FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 +P   +VF H  IL   GE +SKS GN +DPI+VI++ G DALR+ L R     
Sbjct: 592 LNNVGEVPF-SEVFIHPKILDGLGETMSKSKGNGVDPIDVIDKFGPDALRFGLARLATET 650

Query: 337 KDGF----------------------------------YDKDGLKKR------------- 349
           +D                                    +     +               
Sbjct: 651 QDVRMPVQYECPSCEKLIDQTKKNRALPSMDCPACGKPFSTQWAETEADKSLPKAAVVSE 710

Query: 350 ---VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                 +  N + N  SR V M L  ++       +    D  +LS  S V Q + + ++
Sbjct: 711 RFETARNFVNKLWN-ASRFVMMNLDGFEPTSLDVASLPIEDRWLLSRLSTVTQTVGDAIE 769

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 A   +     +     Y +  KP     ++  +      V    + QL  LL  
Sbjct: 770 RYQFGEAARVLYDFAWDEFCSFYVEIAKPRL---SDDSQRQIAQNVIAHGLDQLLRLLHP 826

Query: 465 FVPKLANKIFDILF 478
            +P +   ++  L 
Sbjct: 827 IMPFVTESVWSHLG 840



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK---- 57
             +    +           H+GH     + D++ R  R+ G + L+  GTD  G      
Sbjct: 33  SSKPPFSVVIPPPNVTGALHLGHGLNNTLQDIVVRRKRMQGFETLWMPGTDHAGIATQAV 92

Query: 58  IAKAAQNAGVTT-------------KVFVDQNSRNFRDMADVLDISYDDF-IR-TTEKRH 102
           + +  +     T               + DQ           +  S D   +R T +   
Sbjct: 93  VERRLKEQENKTRHDLGREALVDRIWQWKDQYEERIIGQLKRMGTSCDWERLRFTLDPIC 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               R  +  +  K  IY+G     +    +   +DDEV+      ++     PV   + 
Sbjct: 153 AAAVRATFFDLFGKRRIYRGKRLVNWDTFLQTAVSDDEVFNETKKGHFYHFRYPVIDPKP 212

Query: 163 EGYFF 167
               F
Sbjct: 213 GEPEF 217


>gi|325276215|ref|ZP_08142014.1| leucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324098644|gb|EGB96691.1| leucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 868

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIEYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 151 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 58/410 (14%), Positives = 114/410 (27%), Gaps = 93/410 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+      G            L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIIHCPSCGDVPVPEDQLPVTLPENVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        D   A  W P D +
Sbjct: 480 -----ECSCPKCGAAAKRETDTMDTFVESSWYFARYASPNYEGGMVDPKAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKG------------- 300
           + G +    H +Y   F            N P  K + + G ++ +              
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPF-KNLLTQGMVVAETYYRVASNGGKDWF 593

Query: 301 --------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYF 328
                                           EK+SKS  N +DP  +I++ G D  R F
Sbjct: 594 NPADVEIERDAKAKIIGARLKTDGLPVEIGGTEKMSKSKNNGVDPQSMIDQYGADTCRLF 653

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           ++          +   G++         G    + R   +        +P        D+
Sbjct: 654 MMFASPPDASLEWSDSGVE---------GASRFLRRVWRLAQAHVAQGLPGKLDVAALDD 704

Query: 389 S---ILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           +   I       +++   ++      + A+AQV+++++             L+K  P   
Sbjct: 705 AQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQVMTVMN------------VLEKA-PQAT 751

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
           +    +  E +  + +LL    P ++++++  L       +  + ++D+ 
Sbjct: 752 AQDRALLHEGLEAVTLLLAPITPHISHELWKQLGHDQAVIDAGWPAVDEA 801


>gi|293606889|ref|ZP_06689237.1| leucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292814741|gb|EFF73874.1| leucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 889

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 40  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   + +++   + L+ K+ +KG  
Sbjct: 100 AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWTREMCACDPQYYKWNQWLFLKMLEKGVA 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ R++ Y D+LL  
Sbjct: 160 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPGYYLRITDYADELLGA 215

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            ++         R   E       GL+     +     G  I D   Y+     D 
Sbjct: 216 VQNDLPGWPERVRLMQENWIGKSEGLRFAFPHKIAGQDGQLIQDGKLYVFTTRADT 271



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 26/198 (13%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N +DP  +I+ +G D  R F++      +   +   G++   N  L        
Sbjct: 644 MSKSKNNGVDPQSLIDTLGADTARLFVMFASPPEQTLEWSDSGVEGS-NRFLRRLWSISY 702

Query: 363 SR---SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +R       +    D    T        + +      +L++   + Q    +  ++  + 
Sbjct: 703 ARRDAVARGLANGADWSQATSAV-----KDLRREVYTLLKQADYDYQRIQYNTVVSACMK 757

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           +++ +D   DA+ P           +       E +  L  +L   VP +   ++  L  
Sbjct: 758 MLNAID---DAKLP---------EDAAADAAYAETLGVLLRVLYPVVPHVTWHLWQDLGY 805

Query: 480 ADE-----NRCFQSLDQR 492
           A E     +  +  +D+ 
Sbjct: 806 AKELGDLLDAPWPHVDEA 823


>gi|255007852|ref|ZP_05279978.1| valyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313145559|ref|ZP_07807752.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134326|gb|EFR51686.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 876

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 120/364 (32%), Gaps = 55/364 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       L           P + +N         +KD  +SR+   W
Sbjct: 350 IEPKLSMQWFLKMEHLAQIALEPVMKDEIKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 407

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 408 GHRIPAYFLPEGGYVVAVTDEEALKLAKEKTGNDHLTMADLRQDEDCLDTWFSSWLWPIS 467

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   +   ++P    V G DI+ F    +    +     +P     F+     
Sbjct: 468 LFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVRD 527

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+IE+ G D +R  ++     G D  +D    ++    +  N 
Sbjct: 528 KLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFCNK 585

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N          ++  G I  P     + +           E+ +      +  AL  +
Sbjct: 586 IWNAFRLVKGW--ENGMGTIDIPADAHLAVQWFDQRLDAAAVEVADLFSKYRLSEALMLI 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     V      +T+    +L  +L  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWLLEIVKPAYGQPVNGFIYSMTLSAFERLLAMLHPFMPFITEEL 697

Query: 474 FDIL 477
           +  L
Sbjct: 698 WQQL 701



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWAWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +   ++  +  KG IY+G     +  +     +D+EV    +          V+  + 
Sbjct: 152 SVLKVFVDLYKKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVEGEDS 209


>gi|166367300|ref|YP_001659573.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089673|dbj|BAG04381.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 850

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 29  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + DQN    +     L   I ++  + T    ++   + L+ +  + G  Y
Sbjct: 89  IERGVPPAKWTDQNIAQMKRQLQQLGLSIDWEREVATCSPEYYRWTQWLFLQFFESGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V          A+   V+      +F +++ Y ++LL+  
Sbjct: 149 QKEAAVNWDPIDQTVLANEQVDSEGKSWRSGAK---VERKLLRQWFLKITDYAEQLLTDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 206 DKLTGWPERVKTMQANWIGKSVG 228



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 122/378 (32%), Gaps = 83/378 (21%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKDLSLSRKT 213
                +      Y    +          +P+   N      E + F   G   L+     
Sbjct: 414 YRLRDWLISRQRYWGCPIPVIHCPNCGTVPVPIDNLPVTLPENVEFSGRGASPLAKLEDW 473

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
            +        P       M  +ID+      Y             K   W P D +V G 
Sbjct: 474 VNVDCPRCGTPAKRETDTMDTFIDSSWYFLRYTDAKNEDIPFQFEKVNDWMPVDQYVGGI 533

Query: 266 DILRFHAIY---------------------------WPAFLLSANLPLPKKVFSHGFILH 298
           +    H +Y                               L   N    K V +   I  
Sbjct: 534 EHAILHLLYSRFFTKVLRDRGLVNVDEPFNRLLTQGMVQGLTYKNPETGKYVPAENVIYK 593

Query: 299 KGE---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           + +               K+SKS  N +DP++V+E+ G D  R F++      KD  ++ 
Sbjct: 594 EDKYCDKDTGEVLSFFFEKMSKSKYNGVDPLKVLEKYGADTARMFILFTAPPEKDLQWED 653

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++ +          N V R VS  +++    +     F+++D+ +       ++EI E
Sbjct: 654 AGVEGQFR------FLNRVWRLVSEYIENKPKQVKKIETFSKTDKDLRRAIHTAIKEISE 707

Query: 404 NMQ-NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +++ +   + A+++++ L + +  ++ F                     +  E I  L I
Sbjct: 708 DLEGDYQFNTAISELMKLSNALGDNKCF------------------ASPIYREGIETLLI 749

Query: 461 LLQAFVPKLANKIFDILF 478
           LL  F P L+ +++  L 
Sbjct: 750 LLSLFAPHLSEELWQALG 767


>gi|253580935|ref|ZP_04858197.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847777|gb|EES75745.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 1051

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/459 (13%), Positives = 140/459 (30%), Gaps = 19/459 (4%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTT 98
              ++ F    D  G    +         K      +   ++  + D     +D      
Sbjct: 344 RNYELPFVQFVDGQGNLTKETPYAGVFVKKADPMVLTDLDKEGKLFDAPKFEHDYPH--- 400

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                  C       + +    K        +R+    N      G  G++ +   N   
Sbjct: 401 ----CWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTINWIPESIG-KGRFGDWLENVQD 455

Query: 159 WMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SLSRKTFD 215
           W      ++      +Q +    +       L     +E    V+     +  ++ K  +
Sbjct: 456 WGISRNRYWGTPLNIWQCECGHMHSIGSRQELFEMSGDERAKTVELHRPYIDEITLKCPE 515

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G ++   P+ ++  W D+         Y         + +PA+      D     F+++
Sbjct: 516 CGGEMHRVPE-VIDCWFDSGAMPFAQHHYPFENKELFEQQFPANFISEAVDQTRGWFYSL 574

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              + LL    P    +         G+K+SKS GN +DP + + + G DA+R++     
Sbjct: 575 LAESTLLFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALNKYGADAIRWYFYINS 634

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESIL 391
           A      +    + +     ++          +   + ++D              D+ +L
Sbjct: 635 APWLPNRFHGKAVVEGQRKFMSTLWNTYAFFVLYADIDNFDPTKYELNYDQLPVMDKWLL 694

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYV 450
           S  +  +Q +  ++ N  I  A   +   V E+ + Y    +     K            
Sbjct: 695 SRLNTTVQAVDNDLANYKIPEAARALQEFVDEMSNWYVRRSRERFWAKGMEQDKINAYMT 754

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               +  +A      +P +   I+  L  + +    +S+
Sbjct: 755 LYHALVTIAKTAAPMIPFMTEDIYQNLVRSVDKDAPESI 793



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +  +
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 61  AAQNAGVTTKVFVDQN-----SRNFRDMADVLDISYDDFIRTTE-------------KRH 102
             +  G+  K  +++       +  ++        ++DF  T                 +
Sbjct: 96  VEKKLGLDGKEQIEEYGMEPFIKQCKESVWKYKGMWEDFSSTVGFWADMEHPYVTYYDDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKKLLYKGFKIVPYCPRCGTPLSAQEVSQGYK 199


>gi|217972437|ref|YP_002357188.1| valyl-tRNA synthetase [Shewanella baltica OS223]
 gi|217497572|gb|ACK45765.1| valyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 958

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEADVRAKHNIADSMTLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPE 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 HKGGEMELSLADRWIIGLFNQTVKTFDDHMTAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  +  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGSEAQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|134280305|ref|ZP_01767016.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237813817|ref|YP_002898268.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|254180643|ref|ZP_04887241.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|134248312|gb|EBA48395.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|184211182|gb|EDU08225.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|237505604|gb|ACQ97922.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 864

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|239996928|ref|ZP_04717452.1| leucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 522

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+EK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 32  EKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVISRFQRMQGKNVLQPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N    ++    L   Y  D  + T +  ++   +  + ++ +KG +Y
Sbjct: 92  INNNTAPAKWTYSNIDYMKNQLRSLGFGYDWDREVTTCKSDYYRWEQWFFTRLYEKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   +F +++ Y ++LL   
Sbjct: 152 KKNSTVNWDPVDQTVLANEQVIDG----RGWRSGALVEQKEIPQWFIKITDYAEELLQDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E   E+   +            G
Sbjct: 208 EQLEEWPDQVRAMQANWIGRSEG 230


>gi|115350603|ref|YP_772442.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324034|sp|Q0BIB5|SYL_BURCM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115280591|gb|ABI86108.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 864

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 118/358 (32%), Gaps = 41/358 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A     +       
Sbjct: 467 SGNPLAKSEAFLNCSCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDADTMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETFY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D             + A L    +       L   EK+S
Sbjct: 580 REDASGKKTWYNPADVTVTHDD---------KGRPVGATLNTDGQPVV----LGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++               +R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGATNR 686

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
                   +D       A  ++D+++      VL++   + Q    +  ++  + +++ +
Sbjct: 687 EALATRAGFD-----AAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKMLNAI 741

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D                        V  E    L  +L   VP +  +++  L  ADE
Sbjct: 742 DG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYADE 783


>gi|254805782|ref|YP_003084003.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669324|emb|CBA08353.1| Valyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 945

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYKTYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLETALRLLHPIIPFITEELWQ 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|163796491|ref|ZP_02190451.1| Leucyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159178341|gb|EDP62885.1| Leucyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 867

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 73/202 (36%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR+ +  G +VL   G D  G     AA 
Sbjct: 44  KPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKKARGFNVLHPMGWDAFGLPAENAAI 103

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    ++    + +SYD    I T +  ++   + ++      G  Y+
Sbjct: 104 ERGVHPHGWTHENIDAMKEQLKGMGLSYDWRREIATCDPSYYRHEQKMFLDFLKAGLAYR 163

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   +     +++V  G            V+  +   +F R++ Y   LL    
Sbjct: 164 KESWVNWDPEENTVLANEQVIDG----RGWRSGALVEKRKLSQWFLRITHYAPDLLEALN 219

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   +            G
Sbjct: 220 GLDRWPEKVRLMQHNWIGRSEG 241



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 28/206 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F++ +    +D  + + G+      D A    N
Sbjct: 626 EKMSKSKRNTVDPANIIDAYGADTARLFMLSDSPPERDLEWTEAGV------DGAWRYLN 679

Query: 361 LVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            + R+V+           P P   + + E     C + +  + + ++    + A+AQ+  
Sbjct: 680 RLWRAVTESEIALPPAGTPKPETLSPAAEQTWRSCHKTILGVSDAIERFRFNTAVAQIRE 739

Query: 420 LVSEVDRYFD---AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           L + +    D   A +PW L+                       LL   +P +A +++  
Sbjct: 740 LTNLLHN-LDGRGAGEPWVLR---------------FGWETAVRLLAPMMPHIAEELWVQ 783

Query: 477 LFVAD--ENRCFQSLDQRLKPGFMLH 500
           L          +   D+ L     + 
Sbjct: 784 LGHTSLLTATPWPEADRTLAEDETVT 809


>gi|260466804|ref|ZP_05812989.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029416|gb|EEW30707.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 874

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 6/208 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN    R+   V+ +S D      T +  ++   ++L+    +KG + +
Sbjct: 93  QNKVHPKEWTYQNIATMREQLKVMGLSLDWAREFATCDVDYYHRQQMLFLDFVEKGLVTR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KSSKVNWDPEDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLLDSLD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSL 209
              E+   ++   +       GL     
Sbjct: 209 GLDEWPEKVKLMQQNWIGRSEGLLIRWP 236



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 16/195 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P ++ +  G D  R+F++ +    +D  +  DG         A+    
Sbjct: 629 EKMSKSKKNTVSPEDITDGYGADTARWFMLSDSPPERDVEWTDDGAAG------AHRFMQ 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R VS   +   G+ P      E+  ++     ++L+ + E+++    +RA+A++  L
Sbjct: 683 RIWRLVSTAAETLAGVKPAAADNGEAG-AVSKAAHKILKAVGEDIEKLAFNRAIARIYEL 741

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +    +        K +P           + +  L  L+   +P L+ + ++ L   
Sbjct: 742 ANVLTAPLNDVA---EGKADPAMQGA----CRQAVEILVHLIAPVMPHLSEECWEALGGT 794

Query: 481 D--ENRCFQSLDQRL 493
           D    R +   D  L
Sbjct: 795 DLVAERPWPVFDPAL 809


>gi|254368545|ref|ZP_04984561.1| valine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121448|gb|EDO65639.1| valine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 918

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 QTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVTNTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T +K   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDKGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFIYPVADSDEK 213


>gi|53720546|ref|YP_109532.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126451947|ref|YP_001067687.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167740200|ref|ZP_02412974.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167904281|ref|ZP_02491486.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217420600|ref|ZP_03452105.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242314927|ref|ZP_04813943.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254199150|ref|ZP_04905565.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254299271|ref|ZP_04966721.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|60390678|sp|Q63QT6|SYL_BURPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230618|sp|A3NZB6|SYL_BURP0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52210960|emb|CAH36948.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126225589|gb|ABN89129.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157808838|gb|EDO86008.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|169656980|gb|EDS88377.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217396012|gb|EEC36029.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242138166|gb|EES24568.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 864

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|154706352|ref|YP_001424850.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082995|sp|A9KCQ4|SYL_COXBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154355638|gb|ABS77100.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 820

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y
Sbjct: 91  IQRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    ++++  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNAIVNWDPVDQTVLANEQIVDG----RGWRSGAVVERREISQWFLKITDYSEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   +            G
Sbjct: 207 DELKEWPEQVITMQRNWIGQSQG 229



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
           M  ++++   Y   +           +AK+W P D ++ G +    H +Y          
Sbjct: 492 MDTFVESSWYYARYSCPDQDKVMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L++N P   ++ + G +L  G K+SKS GNV+ P  +I++ G D +R F++      
Sbjct: 552 LGLLNSNEPFI-RLLTQGMVLKDGAKMSKSKGNVVTPQSLIKKYGADTVRLFIIFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCS 395
           +D  +   G++          +     R    +L  +                       
Sbjct: 611 QDLEWSDSGVEGAYR--FLKKLWGFSYRIKDALLAVNQQKERSNYQWEAPEHRQTRQQIH 668

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             LQ+   +M+    +  ++ V+ +++ +          +L   N   A    ++  E  
Sbjct: 669 ECLQQANIDMERLQFNTVVSAVMKILNIL---------IKLTTDNDAEA----HLIREGT 715

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
             L  LL    P +++ ++  L    +
Sbjct: 716 GILLRLLSPITPHISHHLWQSLGFGGD 742


>gi|240949772|ref|ZP_04754104.1| valyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295804|gb|EER46491.1| valyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 954

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARDEAEVRTKYNLPADLALKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMYH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAPH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E R+ +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIESNFNRTVGEFRDALSQYRFDLAANTIYEFTWNQFCDWYLELTKPVFANG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 731 TDAQKRGA-SQTLVRVLEKLLRLAHPIIPFITEEIWQ 766



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|254491654|ref|ZP_05104833.1| valyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463132|gb|EEF79402.1| valyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 940

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 121/394 (30%), Gaps = 79/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++          +   E+     +P    N   S+++  ++D  +SR+   W
Sbjct: 371 IEPMLTDQWYVDAKTLAKPAIEAVETGKVQFVPKSYENMYFSWMRD-IQDWCISRQ-LWW 428

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +     +T G+  
Sbjct: 429 GHRIPAWYDEQGNVYVGHDEESVRAEHSLAADLKLTQDEDVLDTWFSSALWPFSTLGWPK 488

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             D  K  ++P ++ V G DI+ F    +         ++P  +           G K+S
Sbjct: 489 QDDAVKT-WYPGNVLVTGFDIIFFWVARMMMMGIHFLDDVPFKEVYIHGLVRDSHGHKMS 547

Query: 305 KSLGNVI--------------------------------------DPIEVIEEVGVDALR 326
           KS GNV+                                       P  +    G DALR
Sbjct: 548 KSKGNVLDPIDIIDGIDLETLVQKRTSGMMRPQLAEKIEKATRKEFPEGIEPH-GTDALR 606

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           +      + G+D  +D + +      +  N + N     +        G+       + +
Sbjct: 607 FTFASLASTGRDINFDMNRIAG--YRNFCNKLWNAARYVLMNTEGQDTGVENDDVELSLA 664

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  I+S      Q + + +       A   +   +     D Y +  KP     +  + A
Sbjct: 665 DRWIISQLQTTEQNVTKAIDGYRFDHATQSIYEFIWNNYCDWYLELSKPVLTSDSATEAA 724

Query: 445 ST-VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   V V+     +   F+P +  +I+  +
Sbjct: 725 KRGTRRTLVRVLEATLRMAHPFMPFITEEIWQTI 758



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 24/168 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ------ 63
            +  PN     H+GH +   I D L R+HR+ G + L+  GTD  G       +      
Sbjct: 36  MLPPPNVTGSLHMGHGFNNTIMDTLTRYHRMKGDNTLWQPGTDHAGIATQMVVERQVNAE 95

Query: 64  --------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                       T +++  +       +R  R +   LD S + F  T +    +  + +
Sbjct: 96  GKTRHEVGREDFTKRIWKWKEESGGNITRQLRRLGSSLDWSRNRF--TMDDDLSEAVKHV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + K+  +G IY+G     +  +     +D EV       +      P+
Sbjct: 154 FVKLHKEGLIYRGKRLVNWDPKLHTAISDLEVENRDQKGHMWHLRYPL 201


>gi|153207783|ref|ZP_01946383.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218820|ref|YP_002305607.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064864|sp|B6J863|SYL_COXB1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120576335|gb|EAX32959.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013082|gb|ACJ20462.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 820

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y
Sbjct: 91  IQRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    ++++  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNAIVNWDPVDQTVLANEQIVDG----RGWRSGAVVERREISQWFLKITDYSEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   +            G
Sbjct: 207 DELKEWPEQVITMQRNWIGQSQG 229



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
           M  ++++   Y   +           +AK+W P D ++ G +    H +Y          
Sbjct: 492 MDTFVESSWYYARYSCPDQDKVMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L++N P   ++ + G +L  G K+SKS GNV+ P  +I++ G D +R F++      
Sbjct: 552 LGLLNSNEPFI-RLLTQGMVLKDGAKMSKSKGNVVTPQSLIKKYGADTVRLFIIFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCS 395
           +D  +   G++          +     R    +L  +                       
Sbjct: 611 QDLEWSDSGVEGAYR--FLKKLWGFSYRIKDALLAINQQKERSNYQWEAPEHRQTRQQIH 668

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             LQ+   +M+    +  ++ V+ +++ +          +L   N   A    ++  E  
Sbjct: 669 ECLQQANIDMERLQFNTVVSAVMKILNIL---------IKLTTDNDAEA----HLIREGT 715

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
             L  LL    P +++ ++  L    +
Sbjct: 716 GILLRLLSPITPHISHHLWQSLGFGGD 742


>gi|29653898|ref|NP_819590.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|48428541|sp|Q83DY1|SYL_COXBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29541161|gb|AAO90104.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 820

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y
Sbjct: 91  IQRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    ++++  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNAIVNWDPVDQTVLANEQIVDG----RGWRSGAVVERREISQWFLKITDYSEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   +            G
Sbjct: 207 DELKEWPEQVITMQRNWIGQSQG 229



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
           M  ++++   Y   +           +AK+W P D ++ G +    H +Y          
Sbjct: 492 MDTFVESSWYYARYSCPDQDKVMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L++N P   ++ + G +L  G K+SKS GNV+ P  +I++ G D +R F++      
Sbjct: 552 LGLLNSNEPFI-RLLTQGMVLKDGAKMSKSKGNVVTPQSLIKKYGADTVRLFIIFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCS 395
           +D  +   G++          +     R    +L  +                       
Sbjct: 611 QDLEWSDSGVEGAYR--FLKKLWGFSYRIKDALLAINQQKERSNYQWEAPEHRQTRQQIH 668

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             LQ+   +M+    +  ++ V+ +++ +          +L   N   A    ++  E  
Sbjct: 669 ECLQQANIDMERLQFNTVVSAVMKILNIL---------IKLTTDNDAEA----HLIREGT 715

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
             L  LL    P +++ ++  L    +
Sbjct: 716 GILLRLLSPITPHISHHLWQSLGFGGD 742


>gi|119773927|ref|YP_926667.1| valyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119766427|gb|ABL98997.1| valyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 953

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 128/398 (32%), Gaps = 85/398 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPLLTDQWYVAVQKLAQPAIEAVENGDIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGKVYVGRSEDEVRQNHNLGSDVKLRQDDDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMYFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLESLVQKRTGNMMQPQLAAKIEKSTRKEFENGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  ++ D       
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEEQDCGQGGGD 667

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  ++      ++   E++       A   +         D Y +  KP  L+ 
Sbjct: 668 MKLSLADRWVIGKFQETVKAFDEHINAYRFDLAANTLYEFTWNQFCDWYLELTKP-VLQN 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +        +  V V+ QL  L+   +P +   I+D 
Sbjct: 727 GSEAEQRGTRHTLVTVLEQLLRLMHPMMPYITETIWDR 764



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 21/175 (12%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 36  CIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLE 95

Query: 68  TTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRI 108
             +                  +  Q+          +   + +D    T ++   +  + 
Sbjct: 96  AEQGKSRHDLGRDAFMEKVWEWKAQSGGTITSQLRRMGASVDWDRERFTMDEGLSNAVQE 155

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ ++ D   IY+G     +  +     +D EV       +      P+   E  
Sbjct: 156 VFVRLYDDKLIYRGKRLVNWDPKLHTAISDLEVENKEKAGHMWHFRYPLAGTELT 210


>gi|212212949|ref|YP_002303885.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064865|sp|B6J1B2|SYL_COXB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212011359|gb|ACJ18740.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 820

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y
Sbjct: 91  IQRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    ++++  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNAIVNWDPVDQTVLANEQIVDG----RGWRSGAVVERREISQWFLKITDYSEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   +            G
Sbjct: 207 DELKEWPEQVITMQRNWIGQSQG 229



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
           M  ++++   Y   +           +AK+W P D ++ G +    H +Y          
Sbjct: 492 MDTFVESSWYYARYSCPDQDKVMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L++N P   ++ + G +L  G K+SKS GNV+ P  +I++ G D +R F++      
Sbjct: 552 LGLLNSNEPFI-RLLTQGMVLKDGAKMSKSKGNVVTPQSLIKKYGADTVRLFIIFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCS 395
           +D  +   G++          +     R    +L  +                       
Sbjct: 611 QDLEWSDSGVEGAYR--FLKKLWGFSYRIKDALLAINQQKERSNYQWEAPEHRQTRQQIH 668

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             LQ+   +M+    +  ++ V+ +++ +          +L   N   A    ++  E  
Sbjct: 669 ECLQQANIDMERLQFNTVVSAVMKILNIL---------IKLTTDNDAEA----HLIREGT 715

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
             L  LL    P +++ ++  L    +
Sbjct: 716 GILLRLLSPITPHISHHLWQSLGFGGD 742


>gi|67540712|ref|XP_664130.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4]
 gi|40738676|gb|EAA57866.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4]
 gi|259480097|tpe|CBF70918.1| TPA: leucyl-tRNA synthetase (AFU_orthologue; AFUA_6G04910)
           [Aspergillus nidulans FGSC A4]
          Length = 990

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K YI +   YP+   H+GH     I+DVLARF+R+ G DVL   G D  G     AA
Sbjct: 86  EKPKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHDVLHPMGWDAFGLPAENAA 145

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV+   +  +N    ++    +  S++      T     ++  + ++  + +KG  Y
Sbjct: 146 IQHGVSPAGWTTENIAKMKEQLRSISTSFNWEREFATCSPEFYEHTQRIFLMLYEKGLAY 205

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+  +   +FFR++ ++D+LL   
Sbjct: 206 QADAMVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKKKLRQWFFRITEFKDQLLGDL 262



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 72/502 (14%), Positives = 137/502 (27%), Gaps = 100/502 (19%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD--- 104
             G   H  +     +      K      S   +D+A   D + D  I       H+   
Sbjct: 401 VMGVPGHDSRDFLFFKENA-DPKSIPVVLSAE-KDIATSTDANSDIPINEARPFTHEGFL 458

Query: 105 -TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
            T    +  +  +            +   +              Q Y     P+   +  
Sbjct: 459 TTKCGKYHGLHSREAGKMITNDLRATDHADFVEQWRLRDWLISRQRYWGTPIPIIHCDNC 518

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           G     S+     L   +                           ++ K    G K   D
Sbjct: 519 GPQPVPSSDLPVKLPELKGDWLREK---------KGSPLESDQEWITTKCPSCGSKATRD 569

Query: 224 PQYIMYVWIDALTNYLTT-TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY-------- 274
               M  ++D+   YL            S +   P D++V G +    H +Y        
Sbjct: 570 TD-TMDTFVDSSWYYLRFLDSANQERPFSPSVARPVDVYVGGVEHAILHLLYSRFIYKFL 628

Query: 275 -----WPAFLLSANL---PLPKKVFSHGFILH---------------------------- 298
                +P    + +L   P P KV     ++H                            
Sbjct: 629 VQSDLFPEIARTGDLAAPPEPFKVLLTQGMVHGKTYTEPSTGRFLLPSELDFSNPEKPVI 688

Query: 299 ---------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-- 347
                      EK+SKS  N +DP   + + G DA R  ++      +   +D   +   
Sbjct: 689 KKTGETPSVSFEKMSKSKHNGVDPTTCVSKYGADATRAHVLFSAPVSEILEWDDTKIVGI 748

Query: 348 KRVNADLANGI----------GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +R  + L   +             V R+  +        +    + ++ D   +    R 
Sbjct: 749 ERWFSRLWKLVVDAEQTLASSTYKVDRADLVKASVNAASLEPLQSLSDKDADAILTTHRT 808

Query: 398 LQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +  +   ++     ++  ++ +  L +             L  + P    T  Y+    I
Sbjct: 809 VCSVTSCLEKNPYALNTVISDLTKLTN------------SLISSTP----TSPYILHLTI 852

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  LL    P LA++ ++IL
Sbjct: 853 SSLLRLLGPVAPALASECWEIL 874


>gi|89255644|ref|YP_513005.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314148|ref|YP_762871.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501594|ref|YP_001427659.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009914|ref|ZP_02274845.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290953459|ref|ZP_06558080.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313257|ref|ZP_06803894.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89143475|emb|CAJ78651.1| Valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129047|gb|ABI82234.1| valine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252197|gb|ABU60703.1| valyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 919

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 QTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVLNTATADVHRHLANYRFDLVTNTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLTKVLENILALAHPLIPFITESIYQQL 738



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNITGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T +K   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMCRIGASPDWDRERFTMDKGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +            PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSLWHFIYPVADSDEK 213


>gi|315634643|ref|ZP_07889927.1| valine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476591|gb|EFU67339.1| valine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 975

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/415 (16%), Positives = 134/415 (32%), Gaps = 90/415 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 400 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 457

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 458 WGHRIPAWYDAEGNVYVARNEAEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 517

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 518 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 576

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 577 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 636

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 637 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSQG---E 691

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R  +           +         D Y +  KP     
Sbjct: 692 IEFSVADRWIQSEFNRTVETFRSALSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 750

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSL 489
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q  
Sbjct: 751 GNAAQIRAASQTLVHVLEKLLRLAHPLMPFITEEIWQKVKGFMGITADSIMLQPF 805



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|270157446|ref|ZP_06186103.1| Valyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164163|ref|YP_003454301.1| valyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989471|gb|EEZ95725.1| Valyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857336|emb|CBJ11163.1| valyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 921

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 115/358 (32%), Gaps = 54/358 (15%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK---IPDD 223
           +  + +Q             +    R         +     S +   F + IK   +   
Sbjct: 383 WTKTYFQWMNNIEDWCISRQLWWGHRIPAWYDSNGNVYVGYSENDVRFKYKIKDSTVLKQ 442

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ +       +F+P  + V G DI+ F    +       +
Sbjct: 443 DEDVLDTWFSSALWPFSTLGWPERTP-ELEQFYPTSVLVTGFDIIFFWVARMIMMGLKFT 501

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE---------------------- 319
             +P  +   +      +G K+SKS GNV+DP+++++                       
Sbjct: 502 GKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLESLIAKRTSNLMLESVRDK 561

Query: 320 ---------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                           G DALR+      + G++  +D   ++     +  N + N    
Sbjct: 562 IVKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDIGRVEG--YRNFCNKLWNAARY 619

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
            +    ++          +T +D+ ILS   R + ++    +          +   V   
Sbjct: 620 VLMNTDEEQIDFGDGAFQYTPADQWILSRLQRTISKVHHYFETYRFDLLSNTIYEFVWHE 679

Query: 424 -VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             D Y +  KP      +    S          + V+ Q+  +L   +P +  +I+  
Sbjct: 680 YCDWYLELSKP---ILQDEHALSALKRGTRKTLIHVLDQILKMLHPLMPFITEEIWQR 734



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----I 58
           +  K  I           H+GH ++  I D L R+HR+ G   L+  GTD  G      +
Sbjct: 29  DGSKFCIMLPPPNVTGSLHMGHGFQHTIMDALTRYHRMLGDKTLWQPGTDHAGISTQLVV 88

Query: 59  AKAAQNAGVTTKVFVDQ----------------NSRNFRDMADVLDISYDDFIRTTEKRH 102
            +  + +G++ K                      ++  R +   +D S + F  T ++  
Sbjct: 89  ERQLEASGISRKDLTRDEFLQRVWQWKNESGNTITQQMRRLGASVDWSRERF--TMDEGL 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ D+G IY+G     +  +     +D EV    +  +      P+
Sbjct: 147 SAAVQKVFVQLYDEGLIYRGTRLVNWDPKLGTAVSDLEVISEEEDGFLWHIRYPI 201


>gi|165919091|ref|ZP_02219177.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917225|gb|EDR35829.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 819

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y
Sbjct: 91  IQRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    ++++  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNAIVNWDPVDQTVLANEQIVDG----RGWRSGAVVERREISQWFLKITDYSEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   +            G
Sbjct: 207 DELKEWPEQVITMQRNWIGQSQG 229



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
           M  ++++   Y   +           +AK+W P D ++ G +    H +Y          
Sbjct: 491 MDTFVESSWYYARYSCPDQDKVMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRD 550

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L++N P   ++ + G +L  G K+SKS GNV+ P  +I++ G D +R F++      
Sbjct: 551 LGLLNSNEPFI-RLLTQGMVLKDGAKMSKSKGNVVTPQSLIKKYGADTVRLFIIFAAPPE 609

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCS 395
           +D  +   G++          +     R    +L  +                       
Sbjct: 610 QDLEWSDSGVEGAYR--FLKKLWGFSYRIKDALLAINQQKERSNYQWEAPEHRQTRQQIH 667

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             LQ+   +M+    +  ++ V+ +++ +          +L   N   A    ++  E  
Sbjct: 668 ECLQQANIDMERLQFNTVVSAVMKILNIL---------IKLTTDNDAEA----HLIREGT 714

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
             L  LL    P +++ ++  L    +
Sbjct: 715 GILLRLLSPITPHISHHLWQSLGFGGD 741


>gi|71275903|ref|ZP_00652186.1| Valyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71899259|ref|ZP_00681421.1| Valyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|170729346|ref|YP_001774779.1| valyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|254783563|sp|B0U1L1|SYV_XYLFM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71163280|gb|EAO12999.1| Valyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71730992|gb|EAO33061.1| Valyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|167964139|gb|ACA11149.1| valyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 991

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/409 (17%), Positives = 131/409 (32%), Gaps = 95/409 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+     + L   E      +P    N       + ++D  +SR+   W
Sbjct: 403 IEPYLTAQWFVRMDRLAARGLELVERGAVRFVPPNWINT-YRHWMNNIRDWCISRQ-LWW 460

Query: 217 G--IKIPDDPQ-----------------------------YIMYVWIDALTNYLTTTGYL 245
           G  I    D                                ++  W  +     +T G+ 
Sbjct: 461 GHRIPAWFDEYDGSFYVGRSEAEVRAKHALGPEVTLTQDSNVLETWFSSQLWPFSTLGWP 520

Query: 246 DNPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKG 300
           D    +     ++ P+ + V G DI+ F    +       + N+P      +      +G
Sbjct: 521 DPTAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDHFTGNVPFHDVYITGLIRDAQG 580

Query: 301 EKISKSLGNVIDPIEVIEEV-------------------------------------GVD 323
           +K+SKS GNV+DP+++I+ +                                     G D
Sbjct: 581 QKMSKSKGNVLDPLDIIDGITLDDLVAKRTTGLMQPKLAEKIAKATRKEFPDGIAPHGAD 640

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----- 378
           ALR+ +      G+D  +D    +   N    N + N  +R V M   D     P     
Sbjct: 641 ALRFTIAALATHGRDIKFDLGRAEGYKN--FCNKLWN-ATRFVLMNTADDTAHSPAQHQA 697

Query: 379 ---------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRY 427
                    TP   T++++ ILS  + V  E                +         D +
Sbjct: 698 GQDGQDAPRTPQPRTDAEQWILSRLAAVTAEAHAQFAAYRFDLLAQALYEFAWNEFCDWF 757

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  KP  L   +   A++  +  + V+  L  LL   +P +  +++  
Sbjct: 758 VELAKP-ALNGNDTQAAASTRHTLLYVLETLLRLLHPLIPFITEELWRQ 805



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 20/137 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  QPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMCGDDTLWQVGTDHAGIATEMVVSR 93

Query: 65  AGV------------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
             +                      +  Q+          L +S D      T + +   
Sbjct: 94  NVMLEGRGETRDSLGRDGFINKVWEWKQQSGDTIERQMRRLGVSADWSRSTFTMDPQPSA 153

Query: 105 TCRILWKKISDKGDIYK 121
                + +  ++G IY+
Sbjct: 154 AVTEAFVRWYEEGLIYR 170


>gi|304388442|ref|ZP_07370548.1| leucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337559|gb|EFM03722.1| leucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 912

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 78/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 669 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 722

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 723 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 782

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 783 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 829

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      +  +D+ 
Sbjct: 830 LNGAKLWEAGWPEVDEA 846


>gi|212550602|ref|YP_002308919.1| isoleucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548840|dbj|BAG83508.1| isoleucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 1131

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/435 (16%), Positives = 158/435 (36%), Gaps = 28/435 (6%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTEKRHHDTCRILWK 111
           +    +    QN     +  +      +R    VL    D  FIRTT        +    
Sbjct: 438 DIDICVMLKQQNRAFKIEKHIHSYPYCWRTDKPVLYYPLDSWFIRTT------AVKDRMI 491

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ-WMEEEGYFFRLS 170
           ++++  +                +    E  +  +         P+  W  E+G   +  
Sbjct: 492 ELNNTINWKPQSIGQ------GRFSKWLENLQDWNLSRSRYWGTPLPIWCTEDGTEEKCI 545

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
               +L+   +   E  L  E   +   ++      +       + G  +  +   ++ V
Sbjct: 546 GSIKELMEEIQKAIEAGLMAENSYQDFKYIDLHRPYVDKIVLISESGKPMRRETD-LIDV 604

Query: 231 WIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
           W D+         Y  +         F+PAD    G D     F  ++  + ++  ++  
Sbjct: 605 WFDSGAMPYAQLHYPFDNTELIDNGFFFPADFISEGTDQTRGWFFTLHAISVMVKDSVAF 664

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + S   +   G K+SK LGN IDP E+I   G D LR++++       +  ++  G+
Sbjct: 665 RNVISSGLVLDKNGNKMSKRLGNTIDPFEIIATYGSDPLRWYMITNSLPWDNLKFNTKGI 724

Query: 347 KKRVNADLANGIGNLVS-RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           ++ V     + + N  S  ++   + +++            E D  ILS+ + +++E+ E
Sbjct: 725 EE-VRRKFFDTLHNTYSFFALYANVDNFNYWKSEIPLEKRPEIDRWILSLLNSLIKEVDE 783

Query: 404 NMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            +       A   + + V++   + Y   + ++ W+  K + D+ S         ++ ++
Sbjct: 784 QLSTYEPTHAARSIKNFVNDNLSNWYVRLNRKRFWKSGKLDTDKLSA-YQTLYICLKTIS 842

Query: 460 ILLQAFVPKLANKIF 474
            L+    P  A+K++
Sbjct: 843 QLISPIAPFYADKLY 857



 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 20/203 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K              N  P I H     I DV  R+  + G  V    G D HG  +   
Sbjct: 41  KGGPSFVFYEGPPSANGIPGIHHVMARSIKDVFCRYKTMKGFQVKRRAGWDTHGLPVELG 100

Query: 62  AQNAGVTTKV-----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK                   V ++++ + D+   +   I  ++   T + ++
Sbjct: 101 VEKALNITKEDIEKKIPIEEYNTACRKTVMKHTKEWEDLTRKMGYWIDMNNPYITYDNQY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +T   L K++  KG +YKG     YS       +  E+ +             +   + 
Sbjct: 161 IETLWWLLKELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQ-PGCYRDIKDTTCIAQFKI 219

Query: 163 EGYFFRLSAYQDKLLSYYESHPE 185
                 +SA+ D     + + P 
Sbjct: 220 INPLAEMSAFGDAFFLAWTTTPW 242


>gi|51891582|ref|YP_074273.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|60390687|sp|Q67SB4|SYL_SYMTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51855271|dbj|BAD39429.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 861

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 84/229 (36%), Gaps = 6/229 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y      YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 32  SRPKYYALAMFPYPSGKLHMGHVRNYTIVDVIARYRRMKGYNVLHPMGFDSFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G    V+  +N          +  SYD    + T  + ++   + L+ +   KG  Y
Sbjct: 92  IQHGANPAVWTRENIAEMTAQLKQMGYSYDWSRAVYTYREDYYRWTQWLFLQFYKKGLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +    +    +++V  G          + V   +   +FFR++ Y D+LL   
Sbjct: 152 KKTAPVNWCPSCQTVLANEQVEDG----RCWRCDSVVTKKDLAQWFFRITQYADELLEDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +          R  +     +S    +  + +     I I       +Y
Sbjct: 208 KLLEGGWPEQVRIMQQNWIGRSEGARVEFTLEATGDKIPIFTTRPDTIY 256



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 99/298 (33%), Gaps = 59/298 (19%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y          +     +W P D +V G +    H +Y   F   
Sbjct: 501 DTMDTFVCSSWYFLRYTDPQNAERPWNREDVDYWMPVDQYVGGIEHAVLHLLYARFFTKV 560

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 +  + P   ++ + G +L  G K+SKS GN + P E+I + G DA+R F++   
Sbjct: 561 LRDMGLVKVDEPFA-RLLTQGMVLKDGSKMSKSKGNTVSPEEMIAKYGADAVRLFIMFAA 619

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG------------ 381
              +D  +   G++         G    V+R   M++                       
Sbjct: 620 PPERDLDWSDAGIE---------GAARFVNRFYRMVVSALPAYQHARSLLPINPADPASV 670

Query: 382 ------------------AFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVS 422
                               T  D  +  V    ++ I  ++      + A++ ++ + +
Sbjct: 671 MGALSEAEIAEGLAKAAPNLTAEDRELRRVIHATVKRITADLHDRFAFNTAISGLMEMTN 730

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +  Y         ++      +T   V  E +++  +++  F P LA++++  +   
Sbjct: 731 AIYAY---------REKQHAEQNTSALVLAEAVQKAVLIIAPFCPHLADELWSRMGHP 779


>gi|33151851|ref|NP_873204.1| valyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423707|sp|Q7VN93|SYV_HAEDU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33148072|gb|AAP95593.1| valyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 961

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/404 (17%), Positives = 133/404 (32%), Gaps = 93/404 (23%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E+     +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVENGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDESGNVYVARTEAEVRIKHNLPLDLPLTQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K      D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-TTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLADLLEKRTGNMMQPQLAEKIAKATRKEFAATPTLP 615

Query: 321 -------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D 
Sbjct: 616 AGGIAAHGTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDK 670

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
             +      ++ +D  I S  +R + E RE +       A   +         D Y +  
Sbjct: 671 LDLSAGEVEYSLADRWIESSFNRTVGEFREALTQYRFDLAANAIYEFTWNQFCDWYLELT 730

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           KP      +  +        V ++ +L  L    +P +  +I+ 
Sbjct: 731 KP-VFANGSDAQKRATSKTLVSLLEKLLRLAHPIMPFITEEIWQ 773



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T +    
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWQRERF--TMDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEQGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|50085977|ref|YP_047487.1| valyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81392408|sp|Q6F8F0|SYV_ACIAD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49531953|emb|CAG69665.1| valyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 971

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 127/404 (31%), Gaps = 87/404 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++      +   +      +P +  N +     + ++D  +SR+   W
Sbjct: 386 VEPLLTDQWYVKIAPLAQPAIEAVQDGRIKFVPEQYTN-MYMAWMNNIQDWCISRQ-LWW 443

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 444 GHRIPAWYDAEGNVYVGRNEEEVRAKNNLAADLALQQDEDVLDTWFSSGLWTFSTLGWTG 503

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           +       ++     P D+ V G DI+ F         +           +P        
Sbjct: 504 DAKKDAENYFLNTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGTPQVPFKTVYVHG 563

Query: 294 GFILHKGEKISKSLGNVIDPIEVI------------------------------------ 317
                +G+K+SKS GNV+DP+++I                                    
Sbjct: 564 LVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVQKRTFGLMNPKQAEKIEKATRKEFPEG 623

Query: 318 -EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G DA+R+        G+D  +D   ++     +  N I N     +  +       
Sbjct: 624 INSYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVAQ 681

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP- 433
              P  +   ++ I+S   +  Q + +      +  A   +   +     D Y +  KP 
Sbjct: 682 EARPELWELPEQWIMSRLQKAEQAVHQAFATYRLDLAAQTIYDFIWNEYCDWYVELTKPV 741

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               + + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 742 LNDAEVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 785



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 24/165 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ---- 63
              I  PN     H+GH +   I D L R++R+ G + L+  GTD  G       +    
Sbjct: 49  CIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVERQLA 108

Query: 64  ----------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           KV+  +       ++  R +   +D S + F  T +    +  +
Sbjct: 109 AQNISRHDLGREQFIDKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDDGLSNAVK 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
            ++ K+ + G IY+G     +  + +   +D EV    +      
Sbjct: 167 EVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLEVESVEEKGSLWH 211


>gi|223040430|ref|ZP_03610704.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878280|gb|EEF13387.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 823

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 35  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKRGYNVLHPIGFDSFGMPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K++  +N    R   + L +S+       T++  +    +  + K+ +KG +Y+ 
Sbjct: 95  HKIHPKIWTYENIDYMRGELEALGLSFSKKREFATSDPLYTKFEQEFFIKMYEKGLVYRK 154

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          N V   E  GY+ +++ Y  +LL   + 
Sbjct: 155 SAVVNWCEFDQTVLANEQVEDG----CCWRCGNAVIQRELPGYYLKITDYAQELLDDLKR 210

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 211 LEGKWPSQVLTMQENWIGKSFGL 233



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 103/280 (36%), Gaps = 42/280 (15%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKA-------KFWPADLHVIGKDILRFHAIYWPAF-- 278
           M  + +  + Y       +     +A        +   D ++ G +    H +Y   F  
Sbjct: 504 MDTFFE-SSWYFARYASDEKTWQERAFDAKSVNYWMNVDQYIGGIEHAILHLLYARFFQK 562

Query: 279 ------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
                  L  + P  +++ + G +L  G+K+SKS GNV+DP ++I + G D  R F++  
Sbjct: 563 ALRDLSYLRDDEPF-ERLLTQGMVLKDGKKMSKSKGNVVDPDDIINKYGADTARLFILFA 621

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               K+  ++   ++          I  L  RS   I K            ++ ++    
Sbjct: 622 APPQKELEWNDSAVEGAF-----RFINRLYERSAG-IKKCTQIPQIAHANLSKEEKYARM 675

Query: 393 VCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                L++  +   +N   +  +A  +  ++ V+                  A     VT
Sbjct: 676 KVYEALKKSSDVYEENFTFNTLIAACMEALNAVN------------------AQDNQDVT 717

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            E    +  LL+  VP +AN++ + LF        + LD+
Sbjct: 718 TEAFFIILNLLEPIVPHVANELSEQLFGRANFTKIEILDE 757


>gi|28210025|ref|NP_780969.1| isoleucyl-tRNA synthetase [Clostridium tetani E88]
 gi|28202460|gb|AAO34906.1| isoleucyl-tRNA synthetase [Clostridium tetani E88]
          Length = 1047

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/448 (14%), Positives = 144/448 (32%), Gaps = 18/448 (4%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
            D+ G+ I       G+  K    +         D   I Y     T     H       
Sbjct: 352 VDKEGKFIDCVEPWKGMPVKKADSKIIEYM----DEKGILYKSEKFTHS-YPHCWRCDTA 406

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--YFFR 168
                    +    S    L +     +        G++     N + W       +   
Sbjct: 407 LLYYPTDSWFVRMTSLRDKLLENNNKVNWYPDNIRTGRFGKFLENVIDWGISRDRYWGTP 466

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           L  ++ +            L  +  +              +  K    G ++    + ++
Sbjct: 467 LPIWECECGHRECIGSISELKEKGIDVPEDIELHKPYIDKVKLKCSKCGKEMKRTRE-VI 525

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+ +       Y         K +PA       D     F+ +   +  +    P 
Sbjct: 526 DCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGWFYTLTAISTAIFDTNPF 585

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +   G K+SKS GNV+DP +V++  G DA R+      A      +  + +
Sbjct: 586 ENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLDSAGADASRWHFYTASAPWLPTRFSPEDV 645

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIR 402
           ++       + + N+ S  V  +  D D   P       +    D+ I+S  + +++++ 
Sbjct: 646 EETQ-RKFLSTLWNVYSFYV--LYADIDKFNPLEYKDFVSENVMDKWIVSKLNSLIKDVE 702

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++M +  I +A   +   V E+ + Y    +     +   +          +V+  ++++
Sbjct: 703 DHMDSYRITQAALAIEDFVDELSNWYVRRNRSRFWSEELREDKIGAYVTLYKVLTTVSLI 762

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489
              FVP +  +I++ L    +    +S+
Sbjct: 763 AAPFVPFITEEIYNNLVRGLDKNALESI 790



 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E           N +PH+GH    +I D++ R+  + G  VL   G D HG  +   
Sbjct: 47  EEGEYFTFYDGPPTANGKPHVGHVLTRVIKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 106

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRH 102
            +                       K  V   S  ++DM++ L    D      T    +
Sbjct: 107 IEKKLGISGKEEIEKFGVEEFIKECKDSVFTYSSMWKDMSEKLAFWVDMENPYVTYHNDY 166

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++ +K  +YKG     Y  R     +  EV +G  
Sbjct: 167 IESVWWALKQLWNKELLYKGHKVIPYCPRCGTALSSHEVAQGYK 210


>gi|329119905|ref|ZP_08248579.1| leucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464061|gb|EGF10372.1| leucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 876

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 73/198 (36%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I+  G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQQLIDAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQV 417
            + R+V    K               +  + +       + ++ ++  + Q  + A+A V
Sbjct: 687 RLWRTVYEHAKQGAVKAFAGDQSGLGKELKDLRHKLHATIAKVSDDYGRRQQFNTAVAAV 746

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L   +++Y          KT+         V  EV+     LL   VP +   ++   
Sbjct: 747 MEL---LNQY---------DKTDTAS-EAGRAVAQEVLEAALRLLWPIVPHICEVLWS-- 791

Query: 478 FVADENRCFQSLDQRLKP 495
               E R  ++L     P
Sbjct: 792 ----EIRPSENLWSAGWP 805


>gi|311694204|gb|ADP97077.1| valyl-tRNA synthetase [marine bacterium HP15]
          Length = 950

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 130/401 (32%), Gaps = 87/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 372 IEPMLTDQWFADAKTLAKPAIEAVEDGRIQFVPKQYENMYFAWMRD-IQDWCISRQ-LWW 429

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +      T G+ +
Sbjct: 430 GHRIPAWYDADGNIYVGRSEDEVRQKHNLDANVALEQDEDVLDTWFSSALWTFGTLGWPE 489

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 490 ITERLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGTPQVPFHTVYVTGLIRDE 548

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 549 HGDKMSKSKGNVIDPLDMIDGISLDDLLEKRTGNLMQPKLAEKIGKRTKKEFPEGITAHG 608

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L      G+D  +D   L+     +  N + N  +R V M  +  D  +   P
Sbjct: 609 TDALRFTLAAMATTGRDINWDMKRLEG--YRNFCNKLWN-AARYVLMNTEGEDCGVNDEP 665

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S      Q++  ++       A   +   +     D Y +  KP  L  
Sbjct: 666 VELSLADRWIISELQSCEQDVIRHLDQYRFDLAAYALYEFIWNEYCDWYLELSKP-VLSD 724

Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   +         V V+  +  L    +P +  +I+  +
Sbjct: 725 EDASAEAKRGTRRTLVRVLESVLRLAHPMMPFITEEIWQRI 765



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 21/167 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
           AI  PN     H+GHA++  I D L RF R+ G + L+T GTD  G       +      
Sbjct: 36  AIPPPNVTGSLHMGHAFQHTIMDTLTRFKRMQGRNALWTVGTDHAGIATQMVVERKLAAE 95

Query: 70  KVFVDQ---NSRNFRDMADVLD----------------ISYDDFIRTTEKRHHDTCRILW 110
           +             + + D  +                + +D+   T +   +   + ++
Sbjct: 96  EDKTRHDLGREEFIKRIWDWKEHSGGTITRQIRRLGNSVDWDNERFTMDDGFYKAVQEVF 155

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ D+G +Y+G     +  +     +D EV    +  ++     P+
Sbjct: 156 IRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEEKGFFWHLRYPL 202


>gi|223041858|ref|ZP_03612046.1| valyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017351|gb|EEF15774.1| valyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 954

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 134/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARDEAEVRTKYNLPADLALKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMYH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAPH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V  +  D   +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFV--LTNDKLDLSAGD 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R + E R+ +       A   +         D Y +  KP     
Sbjct: 671 VEYSLADRWIQSTFNRTVGEFRDALSQYRFDLAANTIYEFTWNQFCDWYLELTKPVFANG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T+  +        V V+ +L  L    +P +  +I+ 
Sbjct: 731 TDAQKRGA-SQTLVRVLEKLLRLAHPIIPFITEEIWQ 766



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|254190924|ref|ZP_04897430.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254259088|ref|ZP_04950142.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|189083243|sp|Q3JNN1|SYL_BURP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157938598|gb|EDO94268.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254217777|gb|EET07161.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 864

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                     +   V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGSTPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|297566444|ref|YP_003685416.1| isoleucyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850893|gb|ADH63908.1| isoleucyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 1091

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 74/486 (15%), Positives = 151/486 (31%), Gaps = 52/486 (10%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFI 95
                    GTDE+G  I +     G   K       R  ++   +  +      Y    
Sbjct: 375 RKYGTPLLFGTDEYG--IMRVTDERGKFFKDADKGLIRAMKERGVMYHVGTIRHRYPFHD 432

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           RT +                        Y      R E + N++++    +   +    N
Sbjct: 433 RTGDP--------------ILYFAKPSWYIKTSQYRKELFENNEQINWVPEHIKHGRFGN 478

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            +     +    R   +   L  +        + +    E+       L  L L R   D
Sbjct: 479 WL-KDNVDWAISRERYWGTPLPFWVAEDGSEKICVGSVQELSELAGRDLSGLELHRPYVD 537

Query: 216 WGIKIPDDPQY-----IMYVWIDALTNYLTTTGYLDN----------PDGSKAKFWPADL 260
               + +   +     ++ VW D+          +                  K + AD 
Sbjct: 538 DITFVKNGKTFRRVPEVLDVWFDSGAMPYAQWHLMMQGEEPMPGYEANYAQFKKHFNADF 597

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
                D     F++++  A LL         +     +  KG+K+SKS GNV++P+   +
Sbjct: 598 ISEAIDQTRGWFYSLHAIATLLYGMPAFKNVICLGHLVDEKGQKMSKSKGNVVEPLPAFD 657

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
           + G DA+R+++      G    +  + L           + N+ S  V  +  + D    
Sbjct: 658 KYGADAVRWYMFTASDPGDTKRFS-ERLVAEAMRGFLGTLWNVYSFFV--LYANLDRPDL 714

Query: 376 -MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKP 433
              P      E D  +++    +++E+ + +++         + + V E+ + Y    + 
Sbjct: 715 KNPPKVADRPEIDRWLVARTQELIEEVTQALESYDARGGARALETFVEELSNWYVRRNRR 774

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-----ADENRCFQS 488
              K  +            E +  +A+L   F P  A  ++  L       A E+   +S
Sbjct: 775 RFWKNEDAADREAAYATLYEALTTVALLAAPFTPFFAEGLYQNLVRSVRPEAPESVHLES 834

Query: 489 LDQRLK 494
             +   
Sbjct: 835 WPEAKP 840



 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 19/152 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  P + H       D+  R+  + G  V    G D HG  +  A +         
Sbjct: 52  PPTANGLPAMHHVLARSFKDLFPRYRTMRGYHVTRKGGWDTHGLPVEIAVEKRLGVLGRK 111

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                       T K +V +N +++    + L   +  ++   T    + ++   L K++
Sbjct: 112 ALSREEIAEFNETCKQYVFENIQDWNYFTERLGYWVDLENAYITYSNEYIESVWNLLKRL 171

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            DKG I +       S R     + +E+ +G 
Sbjct: 172 WDKGLITQDYKVVPLSPRISTTLSQNEIAEGY 203


>gi|171920261|ref|ZP_02691263.2| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902665|gb|EDT48954.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 874

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 135/360 (37%), Gaps = 35/360 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++ +     +   +  + +      R N+ +       +D  +SR+   
Sbjct: 354 VEPYLSHQWFIKMDSLIKDTIKMQDDCNNKVDFYPNRFNKTLLTWLKNTEDWCISRQ-LW 412

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +    L TT +  N     
Sbjct: 413 WGHQIPVWYHKKTNQIYCDTIPPKDLENWIQDEDVLDTWFSSGMWPLLTTKWNYNSHF-F 471

Query: 253 AKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P  L V G DIL F        +  L    P    +        +G K+SKSLGN 
Sbjct: 472 DRYFPTSLIVTGMDILFFWVSRMMNFSQYLVEKKPFKDVLIHGLIRDSQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP ++I++ G+DA+R F       G+D  +  + L    N +  N I N+     ++  
Sbjct: 532 IDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERLGA--NWNYLNKIWNIAKYIENLDE 589

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
            + +        F + ++ IL+  S++  EI +NM    +  A   +   +       Y 
Sbjct: 590 INDNLNFEDVDKFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLYDFIWNTFASYYL 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   +   +    +  +     V  ++ I+LQ F P ++ +I+  L   + +   Q 
Sbjct: 650 EYTK---VLLQDLTLKNETIKTIRYVFNKILIMLQPFAPNISEEIWLCLNQTNNSILLQE 706



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           HIGHAY+  ++D+L R+ +L G D     GTD  G      
Sbjct: 34  STKKPFTIVLPPPNVTGHLHIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAGIATQTK 93

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                       K++ D+         + L +  D  +++ T +   
Sbjct: 94  FEKNLKVNAQTNRFNLGRELFLEKLKIWKDEQINYIHKQWNALGLGLDYSNYLFTLDPIV 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             T R ++ K+ ++  IY+      + ++ +   ++ EV  
Sbjct: 154 VQTVREVFVKMFNEHIIYRDKKLVNWDIQLKTAISNIEVIH 194


>gi|13357827|ref|NP_078101.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762145|ref|YP_001752350.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508747|ref|ZP_02958221.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701957|ref|ZP_02971594.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|12585354|sp|Q9PQM4|SYV_UREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|11271419|pir||E82913 valyl-tRNA synthetase UU267 [imported] - Ureaplasma urealyticum
 gi|6899238|gb|AAF30676.1|AE002123_9 valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827722|gb|ACA32984.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675679|gb|EDT87584.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700717|gb|EDU18999.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 874

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 135/360 (37%), Gaps = 35/360 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYE-SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           V+      +F ++ +     +   +  + +      R N+ +       +D  +SR+   
Sbjct: 354 VEPYLSHQWFIKMDSLIKDTIKMQDDCNNKVDFYPNRFNKTLLTWLKNTEDWCISRQ-LW 412

Query: 216 WGIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           WG +I                           + ++  W  +    L TT +  N     
Sbjct: 413 WGHQIPVWYHKKTNQIYCDTIPPKDLENWIQDEDVLDTWFSSGMWPLLTTKWNYNSHF-F 471

Query: 253 AKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            +++P  L V G DIL F        +  L    P    +        +G K+SKSLGN 
Sbjct: 472 DRYFPTSLIVTGMDILFFWVSRMMNFSQYLVEKKPFKDVLIHGLIRDSQGRKMSKSLGNG 531

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDP ++I++ G+DA+R F       G+D  +  + L    N +  N I N+     ++  
Sbjct: 532 IDPFDIIDKYGLDAMRLFFASCTTIGEDLNFSTERLGA--NWNYLNKIWNIAKYIENLDE 589

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
            + +        F + ++ IL+  S++  EI +NM    +  A   +   +       Y 
Sbjct: 590 INDNLNFEDVDKFCDVNKWILTELSKLTLEINKNMDKYNLVVATKYLYDFIWNTFASYYL 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           +  K   +   +    +  +     V  ++ I+LQ F P ++ +I+  L   + +   Q 
Sbjct: 650 EYTK---VLLQDLTLKNETIKTIRYVFNKILIMLQPFAPNISEEIWLCLNQTNNSILLQE 706



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           HIGHAY+  ++D+L R+ +L G D     GTD  G      
Sbjct: 34  STKKPFTIVLPPPNVTGHLHIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAGIATQTK 93

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                       K++ D+         + L +  D  +++ T +   
Sbjct: 94  FEKNLKVNAQTNRFNLGRELFLEKLKIWKDEQINYIHKQWNALGLGLDYSNYLFTLDPIV 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             T R ++ K+ ++  IY+      + ++ +   ++ EV  
Sbjct: 154 VQTVREVFVKMFNEHIIYRDKKLVNWDIQLKTAISNIEVIH 194


>gi|153834562|ref|ZP_01987229.1| valyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|269963277|ref|ZP_06177609.1| Valyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|148869005|gb|EDL68050.1| valyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|269831992|gb|EEZ86119.1| Valyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 952

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRDEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMASN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVEGVEGETIMLQALPQFDEANF 790



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV              P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGNMWHFRYPL 204


>gi|120598093|ref|YP_962667.1| valyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146293836|ref|YP_001184260.1| valyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|120558186|gb|ABM24113.1| valyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565526|gb|ABP76461.1| valyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 958

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEAEVRAKHNIADSMTLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPK 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 YKGGELELSLADRWIIGLFNQTVKTFDDHMAAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  +  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGSETQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|186684281|ref|YP_001867477.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689431|sp|B2J7T9|SYL_NOSP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|186466733|gb|ACC82534.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 871

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+   H+GH     I DV+ARF R+ G  V+   G D  G     A
Sbjct: 30  SNKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARFKRMQGYRVIHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    R     L +S D    + T    ++   + ++ +    G  
Sbjct: 90  AIDRGVPPAKWTYQNITQMRQQLQRLGLSIDWECELATCSPDYYKWTQWIFLQFLQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    +          V+      +FF+++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV---DNEGRSWRSGAIVERKLLRQWFFKITDYAEELLND 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 207 LDKLTGWPERVKLMQANWIGKSTG 230



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 85/194 (43%), Gaps = 32/194 (16%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +VI + G+D  R F++ +    KD  +D+  ++         G    +
Sbjct: 635 MSKSKGNGVAPEDVISKYGIDTARMFILFKAPPEKDLEWDEADVE---------GQFRFL 685

Query: 363 SRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVI 418
           +R   ++                 T++++ +       +Q + E+++     + A+++++
Sbjct: 686 NRVWRLVTDYITAGVSRKKAQSDLTKAEKELRRAIHTAIQAVTEDVEDEYQFNTAISELM 745

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L + +              ++ D+ S +     E IR L IL+  F P +A++++ +L 
Sbjct: 746 KLSNAL--------------SDADKNSPIY---AEGIRTLVILIAPFAPHIADELWHLLG 788

Query: 479 VADE--NRCFQSLD 490
            +D    + + S D
Sbjct: 789 ESDSIHTQTWPSFD 802


>gi|188580913|ref|YP_001924358.1| leucyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179344411|gb|ACB79823.1| leucyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 875

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 74/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 46  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N    R     + +S D    I T +  ++   + ++     KG + +
Sbjct: 106 ERKVNPRDWTYANIATMRGQLQSMGLSLDWSREIATCDPGYYKHQQRMFLDFLAKGLVTR 165

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   L    +
Sbjct: 166 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFAQDLHDALD 221

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
               +   +            GL+  
Sbjct: 222 GLERWPEKVRLMQRNWIGRSEGLEVR 247



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 29/195 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + ++G++         G   
Sbjct: 643 EKMSKSKKNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEEGVQ---------GAAR 693

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   ++        P   A    D ++     + L  + E+++    +R +A + +L
Sbjct: 694 FVQRVWRLVHGATAANGPGGTA----DATLRKAAHKALAAVGEDIERLRFNRCVAHIYTL 749

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +D                 R         E  R L  L+   +P LA + + +L   
Sbjct: 750 ANALD--------------EGLRGGASAAAAGEAARILVQLIAPMMPHLAEECWRLLGGE 795

Query: 481 D--ENRCFQSLDQRL 493
                  +  +DQ L
Sbjct: 796 GLVAEASWPVVDQAL 810


>gi|126440306|ref|YP_001060426.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|167817415|ref|ZP_02449095.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167825822|ref|ZP_02457293.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167847306|ref|ZP_02472814.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167895893|ref|ZP_02483295.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167912541|ref|ZP_02499632.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167920495|ref|ZP_02507586.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|226196835|ref|ZP_03792414.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|166230619|sp|A3NDK5|SYL_BURP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126219799|gb|ABN83305.1| leucine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|225931095|gb|EEH27103.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 864

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|161830613|ref|YP_001596489.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082996|sp|A9NC49|SYL_COXBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161762480|gb|ABX78122.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 820

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  + + YP+   H+GH     I DV+AR+    G +VL   G D  G     AA
Sbjct: 31  SREKFYCLSMLPYPSGDLHMGHVRNYTIGDVIARYQIHKGRNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N +  R     L  +YD    I T +  ++   + L+ ++  KG  Y
Sbjct: 91  IQRELPPAEWTRKNIKKMRKQLKQLGFAYDWSREITTCDSTYYRWEQWLFLQLYKKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    ++++  G            V+  E   +F +++ Y ++LL   
Sbjct: 151 KKNAIVNWDPVDQTVLANEQIVDG----RGWRSGAVVERREISQWFLKITDYSEELLKDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   +            G
Sbjct: 207 DELKEWPEQVITMQRNWIGQSQG 229



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%)

Query: 228 MYVWIDALTNY--LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
           M  ++++   Y   +           +AK+W P D ++ G +    H +Y          
Sbjct: 492 MDTFVESSWYYARYSCPDQDKVMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFMHKILRD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L++N P   ++ + G +L  G K+SKS GNV+ P  +I++ G D +R F++      
Sbjct: 552 LGLLNSNEPFI-RLLTQGMVLKDGAKMSKSKGNVVTPQSLIKKYGADTVRLFIIFAAPPE 610

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCS 395
           +D  +   G++          +     R    +L  +                       
Sbjct: 611 QDLEWSDSGVEGAYR--FLKKLWGFSYRIKDALLAINQQKERSNYQWEAPEHRQTRQQIH 668

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             LQ+   +M+    +  ++ V+ +++ +          +L   N   A    ++  E  
Sbjct: 669 ECLQQANIDMERLQFNTVVSAVMKILNIL---------IKLTTDNDAEA----HLIREGT 715

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE 482
             L  LL    P +++ ++  L    +
Sbjct: 716 GILLRLLSPITPHISHHLWQSLGFGGD 742


>gi|87201227|ref|YP_498484.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|123749671|sp|Q2G3C3|SYL_NOVAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|87136908|gb|ABD27650.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 848

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + + Y+     YP+ + HIGH     + DVLAR+ R+ G +VL   G D  G     A
Sbjct: 39  STKPRSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKRMRGFEVLHPMGWDAFGMPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  N +     L  + D    I T E  ++   + L+  +   G +
Sbjct: 99  AMEKGVHPGGWTRDNIANMKAQLKRLGFALDWSREIATCEPEYYGQEQALFLDLYAAGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G            V+  +   +F +++ + D+LL  
Sbjct: 159 YRKESTVNWDPVDMTVLANEQVIDG----RGWRSGALVEKRKLNQWFLKITDFADELLEG 214

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
             +  ++   +    E       GL+
Sbjct: 215 LSTLDKWPEKVRVMQENWIGKSQGLQ 240



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 35/193 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E++ + G DA+R+F++ +    +D  + + G++         G    
Sbjct: 625 KMSKSKKNVVDPDEIVAKYGADAIRWFMLSDSPPERDLPWSEAGIE---------GCARF 675

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   +  +          A T  D+++     + +  +  +++    ++A+A++  L 
Sbjct: 676 VQRLWRLFGQY-------DAAATGEDKALDRKAHQTVHAVASDIEALGFNKAVARIYELT 728

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA- 480
                  +   P   +                 IR+L +L+   +P LA + +     + 
Sbjct: 729 GA----VEKAAPSASRSD--------------AIRKLLLLVAPMMPHLAEEAYARFGSSL 770

Query: 481 DENRCFQSLDQRL 493
             +  +  +D  L
Sbjct: 771 IADAAWPEVDPAL 783


>gi|28899420|ref|NP_799025.1| valyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363411|ref|ZP_05776263.1| valine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879345|ref|ZP_05891700.1| valine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895696|ref|ZP_05904192.1| valine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900268|ref|ZP_05908663.1| valine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726883|sp|Q87LG6|SYV_VIBPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28807656|dbj|BAC60909.1| valyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087423|gb|EFO37118.1| valine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093160|gb|EFO42855.1| valine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308107519|gb|EFO45059.1| valine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111205|gb|EFO48745.1| valine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 952

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRTEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMASN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVEGVEGETIMLQALPQFDEANF 790



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|295132056|ref|YP_003582732.1| isoleucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980071|gb|ADF50536.1| isoleucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 1141

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 7/284 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYW 275
           K       ++ VW D+ +       Y         K W  AD    G D     F+ ++ 
Sbjct: 603 KAMKREADLIDVWFDSGSMPYAQWHYPFENKEKVEKDWRKADFIAEGVDQTRGWFYTLHA 662

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A +   ++     V +   +   G+K+SK LGN +DP E +   G DA R++++     
Sbjct: 663 IATMTFDDVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFETLSVYGPDATRWYMISNANP 722

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSV 393
             +  +D +G+ +                ++   + ++             E D  ILS 
Sbjct: 723 WDNLKFDIEGIGEISRKFFGTLYNTYSFFTLYANIDNFTYAEADVKLEERPEIDRWILSE 782

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +++++ +   +    +A   +   V E   + +    +    K        +     
Sbjct: 783 LHTLIEKVDKFYADYEPTKATRVISEFVQENLSNWFVRLSRRRFWKGDYQQDKISAYQTL 842

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
              +  +A L     P   + ++  L    +   ++S+   L P
Sbjct: 843 YTCLETVAKLSAPVAPFFMDALYKDLNQTTKKENYESVHTALFP 886



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P I H     I D+  R+    G  V    G D HG  +    + 
Sbjct: 41  KPFIFFEGPPSANGLPGIHHVMARSIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK  +                  + +  + D+ + +   +  DD   T + ++ +T
Sbjct: 101 ELGITKEDIGTKISVEQYNEACKNAVMRYTDIWNDLTEKMGYWVDMDDPYITYKPKYMET 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
              L K+I +KG IYKG     YS +
Sbjct: 161 VWYLLKQIYNKGLIYKGYTIQPYSPK 186


>gi|224823411|ref|ZP_03696520.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603866|gb|EEG10040.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 872

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y  +   YP+ + H+GH     I DVLARF R  G +VL   G D  G     A
Sbjct: 30  TSRPKYYALSMFPYPSGKLHMGHVRNYTITDVLARFKRFQGYNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  +G     +   N    +   D L  + D    + T +  ++   + L+ K+ +KG I
Sbjct: 90  AMKSGGAPAAWTYANIDYMKKQLDSLGFALDWERELATCKPDYYRWEQWLFTKLFEKGVI 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D     +++V  G            V+  E   Y+F ++ Y D+LL+ 
Sbjct: 150 YKKNGVVNWDPVDHTVLANEQVIDG----RGWRSGALVEKREIPMYYFAITQYADELLTS 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   ++   +       G
Sbjct: 206 LDTLDGWPEQVKTMQKNWIGKSFG 229



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 82/198 (41%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E IE+ G D  R F++      +   +   G++         G   
Sbjct: 631 EKMSKSKNNGVDPQEFIEKYGADTARLFMMFAAPPEQSLEWSDAGVE---------GAFR 681

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   ++    DG +       E D   + +       +Q++ ++  + Q  + A+A 
Sbjct: 682 FLKRLWKVVKDHADGGVVAAYRGGELDAGLKELRFKLHGTIQKVADDYGRRQQFNTAIAA 741

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L++  D+          + ++  RA     V  EV+    ILL   VP + + +++ 
Sbjct: 742 VMELLNTYDK--------ADRSSDAGRA-----VAQEVLEAAVILLSPIVPHITDALWNA 788

Query: 477 LFVADE--NRCFQSLDQR 492
           L    E   + +  +D+ 
Sbjct: 789 LQPGSELLAQAWPKVDEA 806


>gi|14590903|ref|NP_142976.1| isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647822|sp|O58792|SYI_PYRHO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3257481|dbj|BAA30164.1| 1066aa long hypothetical isoleucyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 1066

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 12/259 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+      + GY  N +    K WPAD  V G+D +   F++    + +    +
Sbjct: 549 VVDVWFDSGIASWASLGYPRNKE-LFEKLWPADFIVEGEDQVTKWFYSQQAASVIAFDTV 607

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  +       +  KG+K+SKSLGN+I P EV+E+ G D  R++++      ++  +   
Sbjct: 608 PYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWK 667

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIR 402
           G+++ V   L       V  +  M L ++D         AF E D+ ILS  + +++E+ 
Sbjct: 668 GVEQ-VRRMLNILWNVYVLSATYMSLDNFDPRNVKVEELAFREEDKWILSRVNSLIREVE 726

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             ++   + +A   + + V       Y     ++ W  +  +PD+ +   Y   +V   L
Sbjct: 727 NGIETFYLTKATRALYNFVVEDLSRWYVRLIRKRLWV-EGDDPDKLAA-YYTLWKVFDVL 784

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F P +  +I+  L
Sbjct: 785 LRLMAPFTPYITEEIYQNL 803



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 57/160 (35%), Gaps = 20/160 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I   
Sbjct: 37  KNGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGFDMHGLPIEVK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            + A                      K F   N +   +   +L I   +DD   T +  
Sbjct: 97  VEQALGLKTKKEIEEKIGVENFIKKCKEFALNNLKIMTEQFKMLGIWMDWDDPYMTIKNE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + ++     KK  +KG + K      +  R E    + EV
Sbjct: 157 YIESAWFTLKKAWEKGLLEKDKRVLHWCPRCETALAEHEV 196


>gi|167721227|ref|ZP_02404463.1| leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           ++  I
Sbjct: 207 DGLGWPERVKVMQHNWI 223



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFD-----AAQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|27375738|ref|NP_767267.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|32171529|sp|Q89WQ1|SYL_BRAJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27348876|dbj|BAC45892.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 874

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 74/204 (36%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + HIGH     + DVLARF R  G +VL   G D  G     AA
Sbjct: 32  SRPKYYVLEMFPYPSGRIHIGHVRNYTLGDVLARFMRAKGFNVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +   N    +     + +S D    I T +  ++   + ++      G   
Sbjct: 92  IERKVAPKAWTYDNIAAMKKQLRSIGLSLDWSREIATCDPSYYKHQQKMFLDFLRAGLAE 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   + F+++ Y  +LLS  
Sbjct: 152 REKRKVNWDPVDMTVLANEQVIDGKG----WRSGAIVEQREMNQWVFKITKYSQELLSAL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++   +   +            GL
Sbjct: 208 DTLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 14/178 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++IE  G D  R+F++ +    +D  +  + ++    +     +  
Sbjct: 629 EKMSKSKKNTVDPDDIIETYGADVARWFMLSDSPPDRDVIWSDERVQGA--SRFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ SV +           P +F     ++       L ++   ++    +  LA +   
Sbjct: 687 LVNDSVELGKA---APAARPASFGADATALRKAAHGALDKVTTEIERLHFNVCLAHIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +                     A+ + +   E  + L  L    +P LA + + +L 
Sbjct: 744 TNAFSEVLQR---------PGQPAADLAWAIREASQILVQLFSPMMPHLAEECWQVLG 792


>gi|311107992|ref|YP_003980845.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310762681|gb|ADP18130.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 885

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   + +++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPQYYKWNQWLFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ R++ Y D+LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPGYYLRITDYADELLGA 211

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            ++         R   E       GL+     +     G  I D   Y+     D 
Sbjct: 212 VQNDLPGWPERVRLMQENWIGKSEGLRFAFPHQIAGQDGQLIQDGKLYVFTTRADT 267



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 53/373 (14%), Positives = 124/373 (33%), Gaps = 39/373 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    ++EA+ +      G   +      +   +++   YF R ++  +        + 
Sbjct: 481 SGNPLTKNEAFLSCACPNCGKPARRETDTMD--TFVDSSWYFMRYTSPGNNNAMVDARND 538

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D G+ +  D  +   +    + N++ +   
Sbjct: 539 YWMPMDQYIGGIEHAVLHLLYARFWTKVMRDMGL-LNFDEPFTKLLCQGMVLNHIYSRKT 597

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                     FWP D+  +  D            ++ A L       ++G +      +S
Sbjct: 598 PQGGI---EYFWPEDVENVYDD---------RGAIVGAKLKSDGSAITYGGV----GTMS 641

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I+ +G D  R F++      +   +   G++   N  L       +S 
Sbjct: 642 KSKNNGVDPQSLIDTLGADTARLFVMFASPPEQTLEWSDSGVEGS-NRFLRRLWS--ISY 698

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
                +                 + +      +L++   + Q    +  ++  + +++  
Sbjct: 699 GQREAIARGLAHGADWSQAPAPVKDLRREVYGLLKQADYDYQRIQYNTVVSACMKMLNA- 757

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
               D  K   L +  P  A+       E +  L  +L   VP +   ++  L  A E  
Sbjct: 758 ---IDDAK---LPEGAPADAA-----YAETLGVLLRVLYPVVPHITWHLWRDLGYAHELG 806

Query: 483 ---NRCFQSLDQR 492
              +  +  +D+ 
Sbjct: 807 DLLDAPWPHVDEA 819


>gi|330507272|ref|YP_004383700.1| valyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928080|gb|AEB67882.1| valyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 858

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 137/431 (31%), Gaps = 38/431 (8%)

Query: 70  KVFVDQNSRNFRDMADVLD-------ISYDDFIRTTEKRHHDTCRILWKK--ISDKGDIY 120
           K  V     +   +   +D       I+      T E+      + L ++  I  +  + 
Sbjct: 274 KQDVRWWMEHHLPLRQAIDRGGRMMPIAGPYSGLTVEETKEKITQDLTEQGIIFKQEPLE 333

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +     W         ++ + +   D          ++W+       RL  + D +   +
Sbjct: 334 QNVGLCWRCKTPIEILSEQQWFVRIDALEIKKMAEEIEWI-PAHMRVRLENWADSMEWDW 392

Query: 181 ESHPEFILPIERRNEVISFVKSGL----------KDLSLSRKTFDWGIKIPDDPQYIMYV 230
               + I                L           +L+  +K    G       Q ++  
Sbjct: 393 CISRQRIFATPIPAWYCKNCHEALVAEESWLPLDPNLTQPKKKCKCGSSEFIPEQDVLDT 452

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           W+D+  + L   G+ D  D       P  L   G DI+R  A Y       L    P   
Sbjct: 453 WMDSSISALAVAGWPDRTDLRM----PTQLRPQGHDIIRTWAFYTILRTRALEGIRPWDA 508

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + +   +   G K+SKSL N I P EV E  G DALR +     + G D  +    +  
Sbjct: 509 ILINGMALGEDGHKMSKSLNNFIRPEEVFESNGADALRQWAAIGGSPGNDIPFQWKEITA 568

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
              +     + ++   S+ +I        P      + D  + +    ++ +  E M   
Sbjct: 569 A--SRFQQKLWSIFRFSLPLIA-------PYDADSGQVDRWLSAELDLLITKTTEAMDRF 619

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               AL  + +   +   D Y +  K   L   +              +  LA L+  F 
Sbjct: 620 QFDEALKAIRAFAWDVLADNYIELVKA-RLYGQDGPEKRAAQGTLFTALETLARLMAPFT 678

Query: 467 PKLANKIFDIL 477
           P L+ +I+  L
Sbjct: 679 PFLSEEIYHTL 689



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 115/404 (28%), Gaps = 26/404 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ +  I T   YP    HIG+A      D  AR+ R+ G +V+F  G D HG      
Sbjct: 32  SKKPQYIIDTPPPYPTGNFHIGNALNWCYIDFAARYKRMRGYNVMFPQGWDCHGLPTEVK 91

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                ++    F      L +S D  +   T +  ++   
Sbjct: 92  VEQLNHITKNQVPREEFRRLCEKLTEEAIDRFHKSMGRLGLSIDWSNEYATMKPEYYVKT 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           +  + ++  KG IY+  +   +  R        EV   +     N  H   +  E E   
Sbjct: 152 QTSFVRMYQKGQIYREDHPVNWCPRCGTAIALAEVEYDSRTSTLNYMHFCAEDGEIEIAT 211

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG-----IKIP 221
            R       +        +       R   +      +  L+       +G     I   
Sbjct: 212 SRPELLAACVAVAVHPEDQRYQKYIGRTVKVPIFNYSVPVLADPAVDSSFGSGFVMICTF 271

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            D Q + + W++                       P     + +   +         ++ 
Sbjct: 272 GDKQDVRW-WMEHHLPLRQAIDRGGRMMPIAG---PYSGLTVEETKEKITQDLTEQGIIF 327

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNV-IDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              PL + V          E +S+    V ID +E+ +           +R         
Sbjct: 328 KQEPLEQNVGLCWRCKTPIEILSEQQWFVRIDALEIKKMAEEIEWIPAHMRVRLENWADS 387

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            + D    R     A  I     ++    L   +  +P     T
Sbjct: 388 MEWDWCISRQ-RIFATPIPAWYCKNCHEALVAEESWLPLDPNLT 430


>gi|240117059|ref|ZP_04731121.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240122697|ref|ZP_04735653.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240127398|ref|ZP_04740059.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 876

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L     ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 485 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 539

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 540 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 595

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 596 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 642

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 643 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 696

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 697 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 753

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 754 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 803

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 804 WPTVDEA 810


>gi|194097598|ref|YP_002000634.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998140|ref|ZP_04718064.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240079903|ref|ZP_04724446.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240112111|ref|ZP_04726601.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240124885|ref|ZP_04737771.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|238690207|sp|B4RNT1|SYL_NEIG2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193932888|gb|ACF28712.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|317165582|gb|ADV09123.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 876

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L     ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 485 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 539

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 540 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 595

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 596 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 642

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 643 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 696

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 697 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 753

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 754 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 803

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 804 WPTVDEA 810


>gi|49474717|ref|YP_032759.1| leucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|60390695|sp|Q6FYL6|SYL_BARQU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49240221|emb|CAF26690.1| Leucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 880

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G DVL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFDVLHPMGWDAFGMPAENAAL 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            + V  K +  QN    R     L +S D      T +  ++   ++L+  +  KG + +
Sbjct: 99  QSKVHPKTWTYQNIAVMRGQLKQLGLSLDWSREFATCDVAYYHRQQMLFLDLYQKGLVAR 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E   +FF++S + + LL+  E
Sbjct: 159 KVAKVNWDPVDQTVLANEQVVDG----CGWRSGALVEQRELAQWFFKISDFSEDLLAGLE 214

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
              ++   +    +       GL    
Sbjct: 215 ELEQWPEKVRTMQKNWIGKSQGLLIRW 241



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 70/180 (38%), Gaps = 20/180 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++          +  
Sbjct: 637 EKMSKSKKNVVDPDDIIASYGADTVRWFVLSDSPPERDVIWTESGVEGAYR--FVQRVWR 694

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V  S  ++ +          A   S         R+L  + ++++    +RA+A++   
Sbjct: 695 CVVLSAPVLKEVIPCTGHQGAALELS-----KAAHRMLCTVEDDLEKFAFNRAIARLYEF 749

Query: 421 VSEVDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   +   P   ++     +  ++      + +     L+   +P LA +    L 
Sbjct: 750 -------LNIMAPLLNKIASVEDEMKAS----LRQAMDFFLALIAPIMPHLAEECHAALG 798


>gi|268602746|ref|ZP_06136913.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681295|ref|ZP_06148157.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685772|ref|ZP_06152634.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268586877|gb|EEZ51553.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268621579|gb|EEZ53979.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626056|gb|EEZ58456.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 878

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L     ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 487 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 541

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 542 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 597

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 598 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 644

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 645 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 698

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 699 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 755

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 756 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 805

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 806 WPTVDEA 812


>gi|240015766|ref|ZP_04722306.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 876

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L     ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 485 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 539

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 540 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 595

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 596 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 642

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 643 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 696

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 697 KQGGAVKAFAGNQDGLSKEIKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 753

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 754 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 803

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 804 WPTVDEA 810


>gi|172059636|ref|YP_001807288.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689177|sp|B1YTA7|SYL_BURA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171992153|gb|ACB63072.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 120/362 (33%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A     +       
Sbjct: 467 SGNPLAKSEAFLNCSCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDADTMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETFY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D             + A L    +       L   EK+S
Sbjct: 580 REDASGKKTWYNPADVTVTHDD---------KGRPVGATLNTDGQPVV----LGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S    + +           A  ++D+++      VL++   + Q    +  ++  + +
Sbjct: 678 VWSFGATNREALAARAGFDAAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|16752936|ref|NP_445207.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|7189579|gb|AAF38477.1| isoleucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
          Length = 1043

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 73/468 (15%), Positives = 146/468 (31%), Gaps = 31/468 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       V      D HG    +  Q  G     ++    +            +     
Sbjct: 332 FLVCKENHVPLVCPVDAHGSFTEEIPQYQG----QYIKHADKEIIKFLKKEGRIF----- 382

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYN 151
                ++ T +  +                 +      ++D+    +  ++   +     
Sbjct: 383 -----YYGTVKHRYPFCWRTDTPLIYKAVNSWFVAVEKIKDKMLRANSSIHWVPEHIQEG 437

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL-- 209
                ++   +              +         ++   R  E ++  +          
Sbjct: 438 RFGKWLEGARDWAISRNRYWGTPIPIWKSADGEILVVGSIRELEELTGTQITDIHRHFID 497

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G      P Y+   W D+         Y         + +PAD    G D   
Sbjct: 498 DLNIVKDGKPFHRIP-YVFDCWFDSGAMPYAQNHYPFENQKETEEAFPADFIAEGLDQTR 556

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   + +L         + +   +   G K+SK L N   P  V++  G DALR 
Sbjct: 557 GWFYTLTVISAILFDRPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRL 616

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTE 385
           +L+  +    +D  +   G++  +   L      L   +    L  +D        A+TE
Sbjct: 617 YLLHSVVVKAEDLRFSDKGIEGVLKQILLPLTNVLSFFNTYAELYGFDPKSQDIEPAYTE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPD 442
            D+ ILS    V+ ++RE+M    ++ A+   ++ + ++ + Y     ++ WE  +  PD
Sbjct: 677 IDQWILSNLYSVVGKVRESMSQYHLNFAVEPFVTFIDDLTNWYIRRCRRRFWE-AEDTPD 735

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           R         EV+     ++  FVP LA  I+  L +  E       D
Sbjct: 736 R-RAAFSTLYEVLTVFCKVIAPFVPFLAEDIYQKLKLEKEPESVHLCD 782



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +   T   
Sbjct: 47  PPFATGLPHYGHLLASTIKDVVGRYATMDGYYVPRRFGWDCHGVPVEYEVEKSLSLTAPG 106

Query: 73  VDQ------NSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
             +       +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 107 AIEDFGIASFNEECRKIVFRYVHEWEYYINRIGRWVDFSSTWKTMDASFMESVWWVFQSL 166

Query: 114 SDKGDIYKGC 123
            ++G +Y+G 
Sbjct: 167 YNQGLVYEGT 176


>gi|289450479|ref|YP_003475345.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185026|gb|ADC91451.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 1071

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/515 (15%), Positives = 154/515 (29%), Gaps = 44/515 (8%)

Query: 3   EREKLYISTAIAYPN-----AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           +++  Y++    Y          HI  A+    A            D+ F     E G  
Sbjct: 324 QKKAYYVTCG-DYVTLSDGTGIVHIAPAFGEDDA------QIGRAYDLPFLQLVKEDGTM 376

Query: 58  IAKAAQNAGVTTKVF---VDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKK 112
               +  AG+  K     + +     + +   +    SY    R      +      + +
Sbjct: 377 HEDVSDFAGMFCKDADKPIIKMMAMNKSLLAAIQFEHSYPFCWRCDTPLIYYARHSWFIR 436

Query: 113 ISDKGDIYKGCYSGWY----SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +S   +      +       S+R+  + N                  P+     E     
Sbjct: 437 MSQMREAMVANNNQVNWIPESIREGRFGNFIANAIDWGLSRERYWGTPLPVWRCEHCG-- 494

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                   L    S  E         E I   K  +  +       +  +K   +   ++
Sbjct: 495 -------KLHVVGSIEELRRLAPACPEDIELHKPYIDAVKFPCPDCNHVMKRVSE---VI 544

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+         Y           +PA      +D     F+++   + LL    P 
Sbjct: 545 DCWFDSGAMPFAQYHYPFENKELFEANFPAQFISEAQDQTRGWFYSLMAISTLLFDRTPY 604

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +         G K+SK  GNVI P E I+ +G DA+R++            +  D +
Sbjct: 605 ENVIVMGLVQDKDGIKMSKHKGNVISPQEAIDRMGSDAVRWYFYTNSNPWLPSRFSFDSV 664

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEI 401
            +         + N  + +  ++  D D   PT         +  D  I+S     ++ +
Sbjct: 665 AEGQRR-FMGTLWN--TYAFYILYADIDQFDPTKYKLEYNKLSVMDRWIISRLQSAIKTV 721

Query: 402 RENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           R+ + +  I  A   +   V E+ + Y    +                     V+R +  
Sbjct: 722 RDYLDHYDITAAARSLQEFVDELSNWYVRRCRTRYWADGMEADKRDAYLTLYTVLRSVVE 781

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +   FVP +A +I+  L  + +    +S+     P
Sbjct: 782 MAAPFVPFIAEEIYQNLVRSVDATAPESVHLAKYP 816



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV----- 67
               N +PHIGH     I D++ R+ R+ G  V F  G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHFLTRAIKDIIPRYKRMQGFHVEFKAGWDTHGLPVELEVEKLLHINGKP 106

Query: 68  ------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    +  M++ +  S   D+   T +  + ++     KKI
Sbjct: 107 QIEAYGLEPFIKKCKESVWKYKDEWEQMSERVAYSADMDNPYVTYDNTYIESEWWALKKI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +Y+G     Y  R        EV +G  
Sbjct: 167 WEKGLLYEGHKIVPYCPRCGTALASHEVAQGYK 199


>gi|254492918|ref|ZP_05106089.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268593990|ref|ZP_06128157.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268596044|ref|ZP_06130211.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268598169|ref|ZP_06132336.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268683466|ref|ZP_06150328.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|226511958|gb|EEH61303.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268547379|gb|EEZ42797.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268549832|gb|EEZ44851.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268582300|gb|EEZ46976.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268623750|gb|EEZ56150.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 878

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L     ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 123/367 (33%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S      E        +
Sbjct: 487 FYETSCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVSAESAKYWGAVD 541

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 542 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 597

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R  +    A  L         V S        EK+SKS  N 
Sbjct: 598 GKDWINPADVELTFDDKGRPVSAVLKADGLP-------VVISGT------EKMSKSKNNG 644

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 645 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 698

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K    +    G     ++  + +         ++ ++  + Q  + A+A V+ L   +++
Sbjct: 699 KQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNTAIAAVMEL---LNQ 755

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
           Y          KT+         V  EV+     LL   VP +   ++  L  A      
Sbjct: 756 Y---------DKTDTGSEQG-RAVAQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 805

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 806 WPTVDEA 812


>gi|170739699|ref|YP_001768354.1| leucyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168193973|gb|ACA15920.1| leucyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 871

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 74/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 32  RPTYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGLPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N    +     + +S D    + T +  ++   + ++      G + +
Sbjct: 92  ERKINPREWTYANIATMKGQLKAMGLSLDWSREVATCDPSYYKHQQRMFLDFLKAGLVTR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR++ Y   L    +
Sbjct: 152 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFRITDYAQDLSDRLD 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +    +       GL+  
Sbjct: 208 TLERWPEKVRLMQKNWIGRSEGLELR 233



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 23/181 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + +DG++         G   
Sbjct: 635 EKMSKSKRNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEDGVQ---------GASR 685

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   ++ +  +   P       +D ++     R L  + E+++    +R +A +  L
Sbjct: 686 FVQRVWRLVNEIAE--RPEQAGDAAADLALRKAAHRALAALGEDIERLRFNRCVAHLYEL 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +        P                  +E  R L  LL   +P LA   + +L   
Sbjct: 744 ANTLQDALAGPAPLG------------RPALIETGRILVQLLAPMMPHLAESSWAVLGQP 791

Query: 481 D 481
            
Sbjct: 792 G 792


>gi|83721013|ref|YP_441758.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83654838|gb|ABC38901.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 882

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 49  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 109 MANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 169 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 224

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 225 DGLGWPERVKIMQQNWI 241



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 641 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 700

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 701 FANREALAVRAPFDV-----AQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 755

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 756 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTYELWKALGYA 799

Query: 481 DE 482
           DE
Sbjct: 800 DE 801


>gi|328471443|gb|EGF42338.1| valyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 952

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRTEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMASN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVEGVEGETIMLQALPQFDEANF 790



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|291532768|emb|CBL05881.1| leucyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 797

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+   H+GH     I DV+AR+  ++G +VL   G D  G     AA
Sbjct: 4   NKPKYYVLEMFPYPSGNLHMGHVRNYSIGDVIARYKTMNGFNVLHPMGFDAFGMPAENAA 63

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV+   + + N  N       + +SY  D  + T  + ++   + L++    KG  Y
Sbjct: 64  IKHGVSPSDWTEDNMANMTRQQKEMGLSYDWDRKVATCHEDYYKWTQWLFELFYKKGLAY 123

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +         +++V  G          + V   + E +F +++ Y D LL   
Sbjct: 124 KKKASANWCETCHTVLANEQVIDGK----CWRCDDTVVKKDLEQWFLKITDYADVLLKDL 179

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++   +       G
Sbjct: 180 DKLEGWPNRVKIMQDNWIGRSEG 202



 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 115/308 (37%), Gaps = 47/308 (15%)

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWP 257
            L+ +    +        P       +D             +P   KA         + P
Sbjct: 444 PLAQAEDFVNCTCPKCGAPAKRETDTMDTFICSSWYYMRYADPHNDKAPFSKDAINYWLP 503

Query: 258 ADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            D ++ G +    H +Y          A L+  + P    + + G ++  G K+SKS GN
Sbjct: 504 VDQYIGGIEHAILHLLYSRFFTKVLKDAGLVEFDEPFT-NLLTQGMVIKDGSKMSKSKGN 562

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+ P E+I++ G D  R F++      +D  +   G++         G    + R   +I
Sbjct: 563 VVSPEEIIKKYGADTARLFILFAAPPERDLEWSDQGVE---------GAWRFIQRVWRII 613

Query: 370 LKDYDGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           L   D +   P     A T+ ++ +  + +  ++++ E++  +   + A++ ++ LV+  
Sbjct: 614 LSYADKVKENPTFDVKALTKEEKELFRILNVTIEKVTEDIGTRSTFNTAISSIMELVN-- 671

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
                    +  K  N +       +  EV+  L  LL  F P +  +++  +       
Sbjct: 672 -------AFYVFKDGNLNA-----GLAREVVINLIKLLAPFAPHVTEELWQQIGQTGSVH 719

Query: 483 NRCFQSLD 490
           +  + + D
Sbjct: 720 HTTWPTFD 727


>gi|221217937|ref|ZP_03589404.1| valyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192243|gb|EEE18463.1| valyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 875

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLRYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNVGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFTEKEDILAL 704



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|15791045|ref|NP_280869.1| leucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236795|ref|YP_001689995.1| leucyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|48428562|sp|Q9HN72|SYL_HALSA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10581638|gb|AAG20349.1| leucine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727861|emb|CAP14649.1| leucine--tRNA ligase [Halobacterium salinarum R1]
          Length = 885

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 76/198 (38%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y + Q H+GH     I D  AR+ R+DG DVL   G D  G     AA     
Sbjct: 37  YVLAMFPYTSGQLHMGHVRNYAITDAFARYRRMDGEDVLHPMGWDSFGLPAENAANERDT 96

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + + ++     RD  + L   YD    I T +  ++   + L+ +  D G + +   +
Sbjct: 97  NPREWTERCIDQMRDQFEALGFGYDWEREITTCDPDYYKWNQWLFTEFRDAGLVDRRAAT 156

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V    D +       PV   + + +FF  +AY D+LL   +    
Sbjct: 157 VNWCPSCETVLADEQVE--GDDELCWRCDTPVTERDLDQWFFETTAYADELLDGLDELDG 214

Query: 186 FILPIERRNEVISFVKSG 203
           +   +            G
Sbjct: 215 WPSNVRDMQRNWVGRTDG 232



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 99/345 (28%), Gaps = 44/345 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G            L  +       L      +  +    
Sbjct: 415 WGVSRQRYWGTPIPIVHCESCGPVSVPDDDLPVELPEFVHTTGNPLDAAEDWKQTTCPDC 474

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G   +  +            D              + +        D  +A  W P D +
Sbjct: 475 GAPAVRET------------DTMDTFLDSSWYFLRFASPAFDDAPFDTQRANDWLPVDEY 522

Query: 262 VIGKDILRFHAIYWPA--------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y            +L    P          +   G K+SKS  N + P
Sbjct: 523 VGGDEHAVMHLLYSRFVTKAFADLDMLEHREPFAGLTTQGMVLGEDGTKMSKSKDNGVAP 582

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +++E G D  R F +R     K   + ++G++              + R +SM     
Sbjct: 583 ERIVDEYGADTARLFTLRAARPSKAFPWSEEGVRSSHT---------FLERLLSMARA-V 632

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +      G    + E +    +  +Q    +  +   +RA+  V  LVS + RY      
Sbjct: 633 NADATADGDLDPAAEYVARETAATVQAATTHFDDMEFNRAVQAVDELVSLLVRY------ 686

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   DR      V    +     LL    P +A + +  L 
Sbjct: 687 -------RDRDDAAPAVVARGVTAAVKLLAPIAPHVAEECWTALG 724


>gi|217976530|ref|YP_002360677.1| leucyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782506|sp|B8EQP4|SYL_METSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217501906|gb|ACK49315.1| leucyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 876

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 71/203 (34%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKRARGFSVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    R     + +S D    I T +  ++   + ++      G + +
Sbjct: 93  QNKSHPAAWTYANIEAMRAQLKSMGLSLDWSREIATCDPAYYRHQQKMFLDFLAAGLVDR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ Y + LL   +
Sbjct: 153 KKSKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDYAEDLLRSLD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
               +   +            GL
Sbjct: 209 GLTRWPEKVRLMQANWIGRSEGL 231



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 89/226 (39%), Gaps = 27/226 (11%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
              +PAD+ +             PA   + +L    +V   G      EK+SKS  N +D
Sbjct: 596 DWMFPADVRIE----------IGPAGRRAFDLASGAEVSIGGI-----EKMSKSKRNTVD 640

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E+I   G D  R+F++ +    +D  + ++G++    A     +  L+   + +   D
Sbjct: 641 PDEIIGTFGADTARWFVLSDSPPERDVIWTEEGVQGA--AKFVQRLWRLIGELIFLSGAD 698

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
                P P + +    +I     + L  + E++     +RA+AQ   L +++        
Sbjct: 699 ---GAPKPQSISPQAAAIRRAAHQSLIRLEEDLDRLRFNRAVAQAHDLANKLGAAVGDI- 754

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  + + A  + +   E    L +++   +P LA + +  L 
Sbjct: 755 ------DSVEIAPDLRFAFREAAEILTLMIAPMMPHLAEECWARLG 794


>gi|167586114|ref|ZP_02378502.1| leucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++         G   
Sbjct: 623 EKMSKSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGSGVE---------GASR 673

Query: 361 LVSRSVSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    +     +          ++D+++      VL++   + Q    +  ++ 
Sbjct: 674 FLRRVWSFGAANREALAERAAFDAARLGDADKALRREIYGVLKQADFDYQRLQYNTVVSA 733

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  EV   L  +L   VP +  +++  
Sbjct: 734 TMKMLNAIDG----------------AKGATPAVLREVYGVLLRVLYPVVPHITFELWKT 777

Query: 477 LFVADE 482
           L  ADE
Sbjct: 778 LGYADE 783


>gi|167580573|ref|ZP_02373447.1| leucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFDV-----AQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATSAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|262277237|ref|ZP_06055030.1| valyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224340|gb|EEY74799.1| valyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 880

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 125/364 (34%), Gaps = 43/364 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
            Y +  +  ++ +  E +F          +   +       P     +        ++  
Sbjct: 343 PYGDRSNTIIEPLLTEQWFVDAKKLAKDAIKKVKKKETSFFPDNW-KKTYFQWMENIEPW 401

Query: 208 SLSRKTFDWG--IKIPDDPQY------------------------------IMYVWIDAL 235
            +SR+   WG  I     P                                ++  W  + 
Sbjct: 402 CISRQ-LWWGHQIPAWYTPDGHIIVANDLKEAHKICKKKYKKILDLKRDKDVLDTWFSSA 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
                T G+ +     K +F+   + V G DI+ F    +          +P  K     
Sbjct: 461 LWPFATLGWPNKTYELK-RFYKTSVLVTGFDIIFFWVARMMMMGLHFMNEVPFEKVYVHA 519

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                KG+K+SKS GNVIDP+ +IEE G DALR+ L+   + G+D     D +K     +
Sbjct: 520 LVRDEKGQKMSKSKGNVIDPLTIIEEFGADALRFTLISMSSPGRDVKLSIDRVKG--YRN 577

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               I N  +    M                 +++ IL   +    +I++ ++N     A
Sbjct: 578 FLTKIWNTFNYCT-MNNVFNIKKSKIKNIKNPANQWILFTLNENKIKIKKLIENFRFDEA 636

Query: 414 LAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             ++   +     D Y +  KP  L   N +       V   V ++  +LL +F+P +  
Sbjct: 637 AKELYLYIWNYFCDWYIEFSKP-LLNSKNKNLIFETKNVLNYVQKENLLLLHSFIPFVTE 695

Query: 472 KIFD 475
           +++ 
Sbjct: 696 ELWH 699



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 22/136 (16%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN- 64
              I           H+GHA    I D+L RF+R  G++ L+  GTD  G       +  
Sbjct: 36  TYSIVIPPPNVTGSLHMGHALNNSIQDLLIRFNRNKGIETLWQPGTDHAGIATQLVVEKQ 95

Query: 65  --------AGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
                     +  + F+ +  +             + +    D S D F  T ++     
Sbjct: 96  LAEKGISRNDLGREEFLKKVWQWKEKSGNTITSQLKKLGSSCDWSKDRF--TMDEGLSKA 153

Query: 106 CRILWKKISDKGDIYK 121
              ++  + +K  IYK
Sbjct: 154 VLKVFVDLYNKKLIYK 169


>gi|258649099|ref|ZP_05736568.1| isoleucine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850745|gb|EEX70614.1| isoleucine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 1137

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 110/301 (36%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 570 FVPGDYSEENYHKIDLHRPYVDEIVLVSQTGKPLHRESD-LIDVWFDSGAMPFAQQHYPF 628

Query: 247 NPDGS--KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 629 EHKEEVESGRCFPADFIAEGVDQTRGWFFTLHAIATMIFDSVSFKNVISNGLVLDKNGNK 688

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP E I + G D LR++++   +   +  +D++G+K+              
Sbjct: 689 MSKRLGNAVDPFETIAKYGSDPLRWYMITNASPWDNLKFDEEGIKEVSRTFFGKLYQTYS 748

Query: 363 SRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   + D+D   P        E D  ILS  + ++ E+   + +    +A   + + 
Sbjct: 749 FFAMYANVDDFDAHAPQVDFSKRPEIDRWILSELNTMVAEVTAALDDYEPTKAGRLINTF 808

Query: 421 V--SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  +  + Y   + ++ W    T  +   +        +     L+    P  A++++  
Sbjct: 809 IADNLSNWYVRLNRKRFW--AGTMTEDKLSAYQTLYACLLTTCKLMAPIAPFFADRLYRD 866

Query: 477 L 477
           L
Sbjct: 867 L 867



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 59/203 (29%), Gaps = 20/203 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 36  EGKPDYVFYDGPPSANGHPGIHHVMARTIKDLFCRYKTMQGYRVERKAGWDTHGLPVELG 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V + +R + D+ D +   +       T E  +
Sbjct: 96  VEKDLGITKVDIGKKISIGDYNAHCRKNVMKFTREWEDLTDKMGYWVDMKHPYITYETGY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   L K++  KG +YKG     YS       +  E+               V     
Sbjct: 156 IESLWWLLKELHKKGLLYKGYTIQPYSPAAGTGLSSHELNL-PGCYRDVKDTTVVAQFVI 214

Query: 163 EGYFFRLSAYQDKLLSYYESHPE 185
                 ++A+       + + P 
Sbjct: 215 CDPKPEMTAWGKPYFIAWTTTPW 237


>gi|206901325|ref|YP_002251143.1| isoleucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740428|gb|ACI19486.1| isoleucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 975

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 139/386 (36%), Gaps = 12/386 (3%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
              +   Y    +    L +     +       +G++ N   N + W      ++     
Sbjct: 399 YYARASWYIKTTAVKEDLINNNRKINWYPEHIKEGRFGNWLANNIDWALSRERYWGTPLP 458

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                S                +  +F         ++ K    G  +   P+ ++  W 
Sbjct: 459 IWVCDSCGHQECIGSFKELGITDTKNFDPHKPYIDQITLKCPKCGGTMHRVPE-VIDCWF 517

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPAFLLSANLPLPKKVF 291
           D+    +    Y    +      +PA+      D  R +         L  N P  K V 
Sbjct: 518 DSGAMPVAQWHYPFENEEEFKASFPANFICEAIDQTRGWFYSLLAISTLVFNEPAYKNVL 577

Query: 292 SHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
               +L  KGEK+SK  GNV+DP  ++ + G DALR+++           +  D + + +
Sbjct: 578 VTELVLDEKGEKMSKHKGNVVDPWLILNKYGADALRWYIFTVSPPWVPLRFAPDAVNEAL 637

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENMQN 407
              L      +   S+   +  YD    +         SD+ I+S  + ++ +++ +M+N
Sbjct: 638 KKFLLTLWNTVSFFSIYAEIDGYDPNQYSVSLKELEDLSDKWIISRLNSLIAKVKNDMEN 697

Query: 408 QLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
               +A   + S V     + Y   + ++ W+ +K     A+    VT  VI++L  L+ 
Sbjct: 698 FNATQAARAIQSFVIDDLSNWYIRLNRERFWKSEKDKDKWAA--YTVTYTVIKELTKLIA 755

Query: 464 AFVPKLANKIFDILFVADENRCFQSL 489
            F+P  A KI+  +    E    +S+
Sbjct: 756 PFIPFTAEKIYQEVIRVAEKNSPESV 781



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +          N +PH GH    I  D+  R+  + G  V    G D HG  +   
Sbjct: 36  KGSPRFNFYEGPPTANGKPHAGHVLPRIYKDLFPRYKTMRGYYVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V +  + +R   + +   I  D+   T    +
Sbjct: 96  VEKELGLNSKQDIEKYGIEEFNKKCKESVFRYEKEWRRFTERIGFWIDMDNPYITLSNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   L KKI +KG +YKG     +  R E   +D EV +G  
Sbjct: 156 IESVWWLLKKIWEKGLLYKGYKIVPWCPRCETALSDHEVAQGYK 199


>gi|300712316|ref|YP_003738130.1| valyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125999|gb|ADJ16338.1| valyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 871

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 128/382 (33%), Gaps = 27/382 (7%)

Query: 116 KGDIYKGCYSGWYSLRDEAY--YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +G+       G     D      + ++ +   DG+        ++W+ E  Y       +
Sbjct: 326 QGEEPVEQSVGCCWRCDTPIEILSKEQWFIRVDGEEILENAREIEWIPEHMYARLEEWTE 385

Query: 174 DKLLSYYESHPEFI---LPIERRNEVISFVKSGLKDLS-------LSRKTFDWGIKIPDD 223
                +  S        +P     E      +  + L              + G +    
Sbjct: 386 GMEWDWVISRQRVFATPIPAWFCEECEYVHVADTEALPVKPTSDGPDIACPECGSEDWRG 445

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLS 281
              +M  W+D+  + L   G+         +F P  L   G DI+R  A Y       L 
Sbjct: 446 ETDVMDTWMDSSISALHVAGWP------DEEFSPVQLREQGHDIIRTWAFYTILRTAALE 499

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P  + + +       G K+SKS GN + P EV+EE G DA R  +      G D  +
Sbjct: 500 EQIPWEQALINGMVFGEDGNKMSKSRGNFVQPEEVVEEHGADAFRQAIALGGQPGSDIQF 559

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               +     +     + N+   S + +  D D       A+ ++D  IL+    V +E+
Sbjct: 560 QSKEVTSA--SRFLTKLWNISRFSDNHL--DEDTPDVDAPAYRDADRWILTELDSVAEEV 615

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
             +M+      AL ++   V     D Y +  K   L +  P       +     +    
Sbjct: 616 ERDMEAYRFDAALRKIREFVWHDLADDYLELIK-GRLYEGRPGERDAARHALYTALSGSL 674

Query: 460 ILLQAFVPKLANKIFDILFVAD 481
            +L  F P    +++  L   +
Sbjct: 675 RMLSPFSPFFTEEVYRDLPGTE 696



 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 15/155 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R +  I T   YP    HIG+A      D  ARF RL G DVL+  G D HG      
Sbjct: 30  EKRPEYVIDTPPPYPTGNLHIGNALGWCYMDFAARFQRLQGKDVLYPQGWDCHGLPTEVK 89

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +      +                +      ++   +L  S  +D   RT +  +    
Sbjct: 90  VEENQGIHRTDVSREEFRELCVEHTESQIDAMKETMGLLGFSQDWDHEFRTMDPSYWGKT 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  + ++     +Y+  +   +  R E    D EV
Sbjct: 150 QRSFVEMHSSEYVYRDEHPVNWCPRCETAIADAEV 184


>gi|225453207|ref|XP_002275733.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 475

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/300 (20%), Positives = 104/300 (34%), Gaps = 31/300 (10%)

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            G++   +   +  ++  +     +T G+ D       KF+P  +   G DIL F    W
Sbjct: 16  CGLRRCCNKD-VSCLFFFSGLWPFSTLGWPDVSTQDFKKFYPTTVLETGHDILFF----W 70

Query: 276 PAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
            A ++   +     V      LH      +G K+SK+LGNVIDPI+ I+E G DALR+ L
Sbjct: 71  VARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRFTL 130

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE- 388
               A G+D     + L    N    N + N     +  +    D          + D+ 
Sbjct: 131 ALGTA-GQDLNLSTERLTS--NKAFTNKLWNAGKFVLQNLPSQSDISAWETILACKFDKE 187

Query: 389 -----------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWE 435
                       ++S    ++  +  +           +          D Y +A K   
Sbjct: 188 EALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIEASKARL 247

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                   A  V    + V   +  +L  F+P +   ++  L    E     S  Q   P
Sbjct: 248 YHSGGHSVAQAV---LLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSWPQTSLP 304


>gi|239813441|ref|YP_002942351.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511553|sp|C5CJ85|SYL_VARPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|239800018|gb|ACS17085.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 876

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 7/235 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I D+L R+ R+ G +VL   G D  G     AA
Sbjct: 31  SRKKYYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGYNVLMPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    R     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  LKNGVPPAKWTYENIDYMRGQLQAMGLAIDWSREIATCDPSYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E  GY+ ++S Y ++LL + 
Sbjct: 151 RKTQVVNWDPVDQTVLANEQVIDGKG----WRTGATVERREIPGYYLKISDYAEELLEHT 206

Query: 181 ESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           +   P +   ++   E       G++           G  I D   Y+     D 
Sbjct: 207 QHKLPGWPERVKLMQENWIGKSEGVRFAFTHDIQDASGRLIQDGRMYVFTTRADT 261



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 62/488 (12%), Positives = 128/488 (26%), Gaps = 89/488 (18%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
             G   H ++    A   G+     V  +     D     D   D       +R      
Sbjct: 344 VMGVPAHDERDFAFANKYGIEIIQVVLVDDEPHFDYHRWQDWYGDK------QRGVTINS 397

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
             +  ++ K  +    ++       E          G   Q Y     P+   +E G   
Sbjct: 398 DNFSGMTHKEAVAAVAHALAQKGLGEMQTTWRLRDWGVSRQRYWGTPIPIIHCDEHGAVP 457

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
                   +L           P+ +     + V   +      R+T         D    
Sbjct: 458 VPEKDLPVVLPTDCVPDGSGNPLAKHEGFHAGVVCPVCGKPARRET---------DTMDT 508

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----- 282
                     Y                + P D ++ G +    H +Y   +         
Sbjct: 509 FVDSSWYFMRYCDPKNEQAMVAEGADYWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGL 568

Query: 283 ---NLPLPK---------KVFSHG--------------------------FILHKG---- 300
              + P  K          ++ H                                G    
Sbjct: 569 VKVDEPFSKLLTQGMVLNHIYYHRDEKGGKNYHPPLEVTPTLDAQGRIVGGTTADGTKIE 628

Query: 301 ----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                K+ KS  N +DP ++IE+ G D  R + +          ++   ++         
Sbjct: 629 YGGVGKMGKSERNGVDPQDLIEKYGADTARLYTMFTAPPEATLEWNDAAVEGSY------ 682

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                + R  +  +   D      G  AF ++ +++      VL+++  + Q    +  +
Sbjct: 683 ---RFLRRVWNFGVAQADVAPVAFGGQAFGKAAQALRREVHTVLRQVDYDYQRMQYNTVV 739

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  + L++             L+   PD ++       E +  L   L    P + ++++
Sbjct: 740 SGAMKLLNA------------LEGFKPDGSAGDAAALREGLGILLRCLYPATPHITHQLW 787

Query: 475 DILFVADE 482
             L    E
Sbjct: 788 QHLGYDKE 795


>gi|171319956|ref|ZP_02909031.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171094786|gb|EDT39825.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++         G   
Sbjct: 623 EKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASR 673

Query: 361 LVSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    + +           A  ++D+++      VL++   + Q    +  ++ 
Sbjct: 674 FLRRVWSFGATNREALAARAGFDAAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSA 733

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  E    L  +L   VP +  +++  
Sbjct: 734 AMKMLNAIDG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKA 777

Query: 477 LFVADE 482
           L  ADE
Sbjct: 778 LGYADE 783


>gi|325143264|gb|EGC65603.1| valyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197461|gb|ADY92917.1| valyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 945

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDETGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWII 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      +   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLSAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|319407774|emb|CBI81421.1| Leucyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 874

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 88/238 (36%), Gaps = 7/238 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 32  EHEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  KV+   N +  R     L  S D      T +  ++   ++L+     KG I 
Sbjct: 92  MQNKVHPKVWTYDNIKVMRKQLQQLGFSLDWSREFATCDVNYYHRQQMLFLDFYQKGLIS 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +FF++S + D LL+  
Sbjct: 152 RQVAKVNWDPVDQTVLANEQVVDG----RGWRSGALVEQRELTQWFFKISDFSDDLLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           E+  ++   +    +       G L   +L +      +    D         + L  
Sbjct: 208 ETLDQWPEKVRIMQKNWIGKSQGLLIRWALRKINIVDDVCDAFDEIVCYSTRPETLFG 265



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 16/178 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++          +  
Sbjct: 631 EKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPERDVIWSESGIEGAHR--FVQRVWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ S  ++ +          A   S         R L  + ++++    +RA+A++  L
Sbjct: 689 LVALSAPVLKEVKSCAGQQGAALELS-----KAAHRTLCAVEDDLEKLAFNRAVARLYEL 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++       A     L+    +  S       + +     ++   +P LA +    L 
Sbjct: 744 LN-----VIASSLNNLENAEDEMKSA----LRQAMDFFIAMIAPMMPHLAEECHAALG 792


>gi|294668710|ref|ZP_06733803.1| leucine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309227|gb|EFE50470.1| leucine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 876

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWEREVATCKPEYYRWEQWLFIKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK    +    G+    ++  + +       + ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L   +++Y          KT+         V  EV+     LL   VP +   ++  
Sbjct: 747 VMEL---LNQY---------DKTDTGSEQG-RAVAQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|237752432|ref|ZP_04582912.1| valyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375921|gb|EEO26012.1| valyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 882

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 142/384 (36%), Gaps = 59/384 (15%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +    E YK   G  Y    N V+    + +F +    Q   +    ++     P + +N
Sbjct: 339 FVEKIEDYKNQVGHCYR-CGNVVEPYISKQWFLKKEVAQG-AIEKINANISNFYPQQWKN 396

Query: 195 EVISFVKSGLKDLSLSRKTFDWGI-----------------------------KIPDDPQ 225
              +     L+D  +SR+   WG                              KI  DP 
Sbjct: 397 N-YNAWMRELRDWCISRQ-LWWGHQIPVFYCESCGGQFASVDIPKACKHCQSDKIMQDPD 454

Query: 226 YIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            ++  W  +     +T GY +               +F+P  L + G DIL F    +  
Sbjct: 455 -VLDTWFSSALWPFSTLGYANGEFGKEELWNPSDMQEFYPNSLLITGFDILFFWVARMLM 513

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L   LP P            G K+SKS GNVIDP+E IEE   D LR+ L    A 
Sbjct: 514 MGEHLLNELPYPDIYLHALVRDEFGNKMSKSKGNVIDPLEKIEEYSADVLRFTLAILCAQ 573

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D       ++   N    N + N  +  + +  + +  +       T   +    + S
Sbjct: 574 GRDVKLSSKQMEVSKN--FTNKLYNAAN-FLLLNAESFPSLSELGAPKTPLGQYFAELLS 630

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVE 453
           + ++E+RE++++   +     +   +       +    W  EL K + D   ++L +   
Sbjct: 631 QNIKEVREHLESYRFNDGANTLYRFLW------NEFCDWGIELSKADKD---SILELGA- 680

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           + ++  +LL  ++P +++ ++  L
Sbjct: 681 IFKEALLLLHPYMPFISDYLWHKL 704



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 22/169 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K  +   I           HIGHA    + D++ RF R+DG   L+  G D  G      
Sbjct: 42  KSGKNFCIMLPPPNVTGSLHIGHALNHTLIDIITRFKRMDGYKTLWQPGLDHAGIATQNV 101

Query: 60  -------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
                  +  +   +  + F+ +                R +      S   F  T ++ 
Sbjct: 102 VEKQLLAQGVKKESLGREEFIKKVWEWKEKSGGMILNQMRKLGSSPAWSRTRF--TMDEG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             +  +  + K+ D G I +G Y   +   D A  + +  YK  +G+ Y
Sbjct: 160 LQNAVKEAFVKLYDGGLIVQGEYLVNWCTHDGALSDIEVEYKENNGKLY 208


>gi|218295828|ref|ZP_03496608.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243566|gb|EED10094.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 878

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 5/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+   H+GH     + DVLARF ++ G +VL   G D  G     AA
Sbjct: 31  KRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYEVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  QN R  ++  +++ I   +D  + T E  ++   + ++ K+ +KG  Y
Sbjct: 91  LKFGLHPRDWTYQNIRQAKESLELMGILYDWDREVTTCEPDYYRWNQWIFIKMWEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + +    +++V    +G+ +  +  PV+  E   ++ R++AY D+LL   
Sbjct: 151 RAGGLVNWCPKCQTVLANEQV---VEGRCWRHEDTPVEKRELTQWYLRITAYADRLLQDL 207

Query: 181 ESHPEFILPIERRNEVISFVK 201
           E           +   I   +
Sbjct: 208 EGLDWPEKVKAMQRAWIGRSE 228



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 112/342 (32%), Gaps = 29/342 (8%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERR 193
           +Y       G   +      +   + +   Y+ R +   +  L +      F +P  +  
Sbjct: 479 FYETTCPKCGGPAKRDTDTMD--TFFDSSWYYLRYTDPHNDRLPFDPGKANFWMPVDQYI 536

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
             V   V   L     ++   D G+   ++P   ++     L         ++       
Sbjct: 537 GGVEHAVLHLLYSRFFTKFLHDLGMVEVEEPFKGLFTQGMVLAWTDFGPVEVEGERVRLP 596

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +  P  + +  ++             + A L   +    H   L K   +SKS GN +  
Sbjct: 597 E--PTRIRLEVQEK---ELSLEDVKKMGAELRPHEDGTVH---LWKPAVMSKSKGNGVMV 648

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              ++E G D  R  ++       +  + ++G++        N I   V+   S + K  
Sbjct: 649 GPFVKEEGADIARITILFAAPPENEMVWTEEGVQGAWR--FLNRIYRRVAEDRSELEKIS 706

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                   A   +D  +       L+++ E+++    + A+A ++  ++ +  Y      
Sbjct: 707 GRFQ--KEALEGADRELYGKLHATLKKVTEDLEALRFNTAIAALMEFLNALYEY------ 758

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    R   V  +    IR    +L  F P LA +++ 
Sbjct: 759 --------RRERPVTPLYRTAIRYYLQMLFPFAPHLAEELWH 792


>gi|189083244|sp|Q2SZ91|SYL_BURTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYDNIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFDV-----AQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTYELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|163782779|ref|ZP_02177775.1| leucyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881900|gb|EDP75408.1| leucyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 605

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 6/185 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     I D +ARF ++ G ++L   G D  G     AA  
Sbjct: 31  DKFYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLKMKGKNLLHPMGWDAFGLPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +  +N    +    +L  SY  D  + T +  ++   + ++ K+ ++G  Y+ 
Sbjct: 91  QGIHPAKWTYENIDYMKRQLKLLGFSYDWDREVATCDPEYYRWNQWIFLKMYERGIAYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   DE    +++V +G           P+   E   +F +++AY ++LL   + 
Sbjct: 151 TAVVNWCPHDETVLANEQVIEGK----CWRCGTPIVQREIPSWFLKITAYAERLLEDLDK 206

Query: 183 HPEFI 187
                
Sbjct: 207 LEGRW 211


>gi|78188366|ref|YP_378704.1| valyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170565|gb|ABB27661.1| valyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 902

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 132/365 (36%), Gaps = 50/365 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    E +F ++     + L           P +  N         ++D  +SR+   W
Sbjct: 363 VEPYLSEQWFVKMEPLAKEALRVVNEGEITFHPQQWLNT-YRHWMENIQDWCISRQ-IWW 420

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I    D                            ++  W  +    LTT G+ D   
Sbjct: 421 GHRIPAWYDRDGKVWVAENYEEACALAGTTELRQDEDVLDTWFSSWLWPLTTLGWTDRQS 480

Query: 250 GSKAK--FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            ++    F+P +  V G DI+ F    +         ++P     F+      KG K+SK
Sbjct: 481 DNENLRAFYPTNTLVTGPDIIFFWVARMIMAGLYFKGSIPFRDVYFTSILRDLKGRKLSK 540

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN  DP++V+E  G DALR+ ++     G+D  + ++  +  +  + A  I N  +R 
Sbjct: 541 SLGNSPDPLKVMETYGTDALRFTIIYISPLGQDVMFGEEKCE--LGRNFATKIWN-ATRL 597

Query: 366 VSM-----------ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           + M               +    P    F+ ++  +L   + +LQ          ++  +
Sbjct: 598 LFMQREKFFASPEEFAATFQAFDPHAVTFSSAETWLLQRYNAMLQRYHYACSQFRVNDMV 657

Query: 415 AQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +         D Y +A K   L   N + A   L + ++V+      L   +P L ++
Sbjct: 658 KLLYDFFWGDYCDWYLEALKV-RLATCNREEAQQSLALALKVLEGTLQTLHPVMPFLTDE 716

Query: 473 IFDIL 477
           I+  L
Sbjct: 717 IWHHL 721



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER+   +            +GH     I D+  R++R+ G + L+  GTD  G       
Sbjct: 45  ERQPFTVLMPPPNVTGSLTLGHVLNHTIQDIFIRYNRMVGREALWLPGTDHAGIATQTVV 104

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + ++           L IS D    + T ++    
Sbjct: 105 ERKLKKENITRHDLGREKFLEHVWQWRNEYGDLILRQLRKLGISCDWRRNLFTMDESASK 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +  +   G IY+G     +    +   +D+EV  
Sbjct: 165 AVMNAFVMLYRDGLIYRGSRIINWCPVSQTALSDEEVIM 203


>gi|325133537|gb|EGC56200.1| leucyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 910

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++    T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWERETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 667 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 720

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 721 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 780

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 781 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 827

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 828 LNGAKLWEAGWPTVDEA 844


>gi|302660650|ref|XP_003022002.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
 gi|291185926|gb|EFE41384.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
          Length = 975

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 10/236 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+   H+GH     I+DVLARF ++ G DVL   G D  G     A
Sbjct: 73  SSKEKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKQMKGYDVLHPMGWDAFGLPAENA 132

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  QN  N R+    L I   +D  + T     +   + L+  + +KG  
Sbjct: 133 AIERGIHPEGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLA 192

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  E + +FFR++A+++ LL  
Sbjct: 193 YQAEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKD 249

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +S     L     + +++  +  L     +   F   I        +     D L
Sbjct: 250 LDS-----LSGSWPDRILTMQRHWLGKSRGALVPFTLSIPGETLDIEVFTTRPDTL 300



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 75/199 (37%), Gaps = 15/199 (7%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KR 349
           +        EK+SKS  N +DP   IE  G DA R  ++      +   +D+  +   +R
Sbjct: 664 TQIPANISFEKMSKSKYNGVDPNTCIESYGADATRAHVLFSAPVSEVLEWDETKIVGIQR 723

Query: 350 VNADLANGIG---NLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEI 401
             + +   +    N + R+      D      D  +P     +E++ ++L + +  +  +
Sbjct: 724 WFSRIWKAVEDTGNSLKRANFSSAPDALSSLNDMALPPLDKLSETESNLLHMTNNTISSV 783

Query: 402 RENMQNQLIHRALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRASTV--LYVTVEVIRQL 458
              ++       L  VI  L+   +       P E  KT+P   S           +  L
Sbjct: 784 SYCLEKNQYG--LNTVISDLIKLTNAISAVPLPEESSKTSPSAQSVTPLHTTLYIALNSL 841

Query: 459 AILLQAFVPKLANKIFDIL 477
             +L    P  A++ +++L
Sbjct: 842 LRMLAPIAPAFASECWEVL 860


>gi|288559384|ref|YP_003422870.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
 gi|288542094|gb|ADC45978.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
          Length = 1143

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 108/277 (38%), Gaps = 20/277 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VWID+         Y    +    K++P D    G D     F++      +     
Sbjct: 585 VLDVWIDSGVAGWAALYYPREEEM-FDKWYPYDFICEGHDQTRGWFYSQLGTGVIALDQA 643

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  K +     +  +G+K+SKSLGNV+ P EVIE+ G D LR++L+       D  +  D
Sbjct: 644 PYNKVLMHGFVLDEEGKKMSKSLGNVVQPEEVIEKYGADVLRFYLLWACKPWDDLKFVWD 703

Query: 345 GL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCSR 396
            L   K++   L N        +  M L ++D                  D  ILS  + 
Sbjct: 704 ELNNVKKMFNILWNVYVFS---TTYMALDEFDPAKCVLDGPDANVTLRNEDRWILSRVNS 760

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVLYVTV 452
           + +E  + + +   H A   + + +       Y      + W  +  +PD+     Y   
Sbjct: 761 LAKEAGDAINDVHFHLATRAINNFILEDLSRWYVRLIRGRTWV-ESDDPDKLGA-YYTLY 818

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  L  L+    P L+ ++++ L    ++   +S+
Sbjct: 819 NTLNTLIHLMAPITPHLSEEVYENLVKNLDDNAVESI 855



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 20/165 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +        Y + + H+G  +  +I D L R+  ++G  +    G D HG  I   
Sbjct: 37  KNGPQYSFLDGPPYCSGKIHLGTTWNKVIKDTLLRYKSMNGFALRRQAGWDTHGLPIEHK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +                        K F  +N     +    L +   +D+   T + +
Sbjct: 97  VEQLLGIESKQEIEEKYGIDKFVGKCKEFAMENKVAMTEQFKSLGVWMDWDNPYMTLDPK 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + ++     KK  +K  + K      +    +      E+    D
Sbjct: 157 YMESAWWTLKKTHEKNLLTKDKRVISWCPHCQTALAAAEIDYTED 201


>gi|153840104|ref|ZP_01992771.1| valyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746289|gb|EDM57361.1| valyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 957

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/454 (17%), Positives = 149/454 (32%), Gaps = 95/454 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRTEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRTGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQNQLI 410
            + N  SR V M  ++ D    +         ++ +D+ I S      +    ++ N  +
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFHSANEQGGEIEYSLADKWIESQFELAAKAFNNHIDNFRL 702

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A   +   +     D Y +  KP  L K    +        + V+ +   L    +P 
Sbjct: 703 DMASNTLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPY 761

Query: 469 LANKIFDIL-----FVADENRCFQSLDQRLKPGF 497
           +   I+  +      V  E    Q+L Q  +  F
Sbjct: 762 ITETIWQSIKPLVEGVEGETIMLQALPQFDEANF 795



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGRDAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGHMWHFRYPL 204


>gi|291393537|ref|XP_002713327.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 903

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N ++ R   D L    S+D  + T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIKHMRKQLDHLGLWFSWDREVTTCLPDYYRWTQHLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMKDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LADLPEWYGIRGMQAHWIGDC 276



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 109/329 (33%), Gaps = 69/329 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        +   D              Y          D + A +W P DL++ GK
Sbjct: 502 VNCSCPRCKGAARRETDTMDTFVDSAWYYFRYTDPQNPHSPFDAASADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDQNMVKHREPFRKLLAQGLIKGQTFRLPSGQYLQREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     +     EK+SKS  N +DP EV+++ G+D +R +L+      KD  +D  
Sbjct: 622 SVPVHARTRAQVEVTWEKMSKSRHNGVDPEEVVQQYGLDTIRLYLLFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   ++  ++         + V+ +
Sbjct: 680 -VKTDALPGVLRWQQRLWALATRFIEARTSGKAPQPQLLSQEQKAEARRLWEYKNAVISQ 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE---VIR 456
           +  +  ++  ++ A++Q++ L + +                   + +V++ + E    + 
Sbjct: 739 VTGHFTEDLSLNSAVSQLMGLTAAL----------------MQASQSVVHHSPEFEDALG 782

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P +A++++  L +     C
Sbjct: 783 ALVVMAAPMAPHIASELWAGLALVPTKLC 811


>gi|291453113|ref|ZP_06592503.1| tRNA synthetase [Streptomyces albus J1074]
 gi|291356062|gb|EFE82964.1| tRNA synthetase [Streptomyces albus J1074]
          Length = 640

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 97/521 (18%), Positives = 178/521 (34%), Gaps = 39/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  +      PN   H+GH A   + AD+LAR  R  G +  + TGTD+H   +A AA+
Sbjct: 117 ERSLVFCPPPTPNGGLHLGHLAGPYVRADMLARALRSMGREARYVTGTDDHQSYVAAAAR 176

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIYKG 122
             G T                    ++ D   R      H    R L +K++      + 
Sbjct: 177 LRGTTPAEVATAEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPAAKEE 236

Query: 123 CYSGWYSLRD-----EAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                Y         +A+      +    +DG+   A   P +  E      R+   +  
Sbjct: 237 ERPTAYCPTCALSLHQAFARGRCAHCDAASDGEICEACGRPNEARELSAAHCRICGTEAV 296

Query: 176 LLSYYESHPEF--------------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             +      +                 P +    V   +  GL    L R T +WG+ + 
Sbjct: 297 TRTERALWLDLDAYAAELREYLRLAHTPPDLLTLVERLLDEGLPAYRLGRTT-EWGVDL- 354

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLL 280
                 +  W D          +LD       +  PA +   +G D   ++A+  P    
Sbjct: 355 -GDGQALDAWADLALT------FLDAARTESEQNGPARIALFLGYDNSFYYAVLLPVLAF 407

Query: 281 SANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +A L   LP    ++ F+    EK S S G+ +   + +   G DA+R  L+RE   G+ 
Sbjct: 408 AAGLADHLPAAFVTNQFLHLGDEKFSTSRGHAVWADDALAAAGPDAVRLALLREAPEGRV 467

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                +   +     L       +    +   +D   ++P  GA+T+         +   
Sbjct: 468 TRITAERAGQLTEDPLYRAAHAWLDGFAASAGED-GAVVPGTGAWTDVHREFYRYLNLAT 526

Query: 399 QEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++   +  ++      + Q+ S V+    +  A++      +  + A T L +     +
Sbjct: 527 RQLDGLLLPESFSARSYVDQLESFVTRCAEFRAAEQALRATPSLAEEARTSLALEYLAAK 586

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             A L     P LA ++++ L +  E          L  G 
Sbjct: 587 VFAALAWPITPGLAQRVWEWLGLPGEPVREADW-TFLPSGT 626


>gi|262369356|ref|ZP_06062684.1| valyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262315424|gb|EEY96463.1| valyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 964

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/405 (15%), Positives = 132/405 (32%), Gaps = 89/405 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++      +   +      +P +  N +     + ++D  +SR+   W
Sbjct: 379 VEPLLTDQWYVKIAPLAQPAIEAVKDSRIKFVPEQYSN-MYMAWMNNIQDWCISRQ-LWW 436

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 437 GHRIPAWYDAEGNVFVGRDEEEVRAKNNIPANVELNQDEDVLDTWFSSGLWTFSTLGWTG 496

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           + +  KA ++     P D+ V G DI+ F         +           +P        
Sbjct: 497 DAEKDKANYFLNTFHPTDVLVTGFDIIFFWVARMIMLTMHFMKNEDGTPQVPFKTVYVHG 556

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE---------------------------------- 319
                +G+K+SKS GNV+DP+++I+                                   
Sbjct: 557 LVRDGEGQKMSKSKGNVLDPLDLIDGVDLETLVQKRTTGLMNPKQAAKIEKSTRKEFPEG 616

Query: 320 ---VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G DA+R+        G+D  +D   ++     + AN I N     +    +   G 
Sbjct: 617 IQAYGTDAVRFTFCALANTGRDIKFDMKRVEG--YRNFANKIWNATRFVMMNCEEQVIGT 674

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
                 +   ++ I+S   +    +++      +  A   +   +     D Y +  KP 
Sbjct: 675 EVRQDLWELPEQWIVSRLQKAEAAVQQAFATYRLDLAAQAIYEFIWNEYCDWYVELTKP- 733

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  + + V+     L    +P L  +I+  L
Sbjct: 734 VLNDENVSVERKAEVRRILLAVMEASLRLAHPIMPYLTEEIWQTL 778



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GH +   I D L R++R+ G + L+  GTD  G      
Sbjct: 35  EKGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMSGKNTLWQPGTDHAGIATQMV 94

Query: 62  AQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +       +R  R +   +D S + F  T ++ 
Sbjct: 95  VERQLGAQGVSRHDLGREKFIEKVWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             +  + ++ K+ + G IY+G     +  + +   +D EV    +         
Sbjct: 153 LSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLEVESDKEEAGSLWHFK 206


>gi|239981255|ref|ZP_04703779.1| methionine--tRNA ligase [Streptomyces albus J1074]
          Length = 650

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 97/521 (18%), Positives = 178/521 (34%), Gaps = 39/521 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           E+  +      PN   H+GH A   + AD+LAR  R  G +  + TGTD+H   +A AA+
Sbjct: 127 ERSLVFCPPPTPNGGLHLGHLAGPYVRADMLARALRSMGREARYVTGTDDHQSYVAAAAR 186

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH-DTCRILWKKISDKGDIYKG 122
             G T                    ++ D   R      H    R L +K++      + 
Sbjct: 187 LRGTTPAEVATAEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPAAKEE 246

Query: 123 CYSGWYSLRD-----EAYYNDDEVYKG--ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                Y         +A+      +    +DG+   A   P +  E      R+   +  
Sbjct: 247 ERPTAYCPTCALSLHQAFARGRCAHCDAASDGEICEACGRPNEARELSAAHCRICGTEAV 306

Query: 176 LLSYYESHPEF--------------ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
             +      +                 P +    V   +  GL    L R T +WG+ + 
Sbjct: 307 TRTERALWLDLDAYAAELREYLRLAHTPPDLLTLVERLLDEGLPAYRLGRTT-EWGVDL- 364

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLL 280
                 +  W D          +LD       +  PA +   +G D   ++A+  P    
Sbjct: 365 -GDGQALDAWADLALT------FLDAARTESEQNGPARIALFLGYDNSFYYAVLLPVLAF 417

Query: 281 SANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +A L   LP    ++ F+    EK S S G+ +   + +   G DA+R  L+RE   G+ 
Sbjct: 418 AAGLADHLPAAFVTNQFLHLGDEKFSTSRGHAVWADDALAAAGPDAVRLALLREAPEGRV 477

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                +   +     L       +    +   +D   ++P  GA+T+         +   
Sbjct: 478 TRITAERAGQLTEDPLYRAAHAWLDGFAASAGED-GAVVPGTGAWTDVHREFYRYLNLAT 536

Query: 399 QEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++   +  ++      + Q+ S V+    +  A++      +  + A T L +     +
Sbjct: 537 RQLDGLLLPESFSARSYVDQLESFVTRCAEFRAAEQALRATPSLAEEARTSLALEYLAAK 596

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             A L     P LA ++++ L +  E          L  G 
Sbjct: 597 VFAALAWPITPGLAQRVWEWLGLPGEPVREADW-TFLPSGT 636


>gi|156975871|ref|YP_001446778.1| valyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156527465|gb|ABU72551.1| hypothetical protein VIBHAR_03637 [Vibrio harveyi ATCC BAA-1116]
          Length = 952

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 148/449 (32%), Gaps = 90/449 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRDEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + N  SR V M  ++ D         ++ +D+ I S      +    ++ N  +  A  
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFNGGEIEYSLADKWIESQFELAAKAFNNHIDNFRLDMASN 702

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   +     D Y +  KP  L K    +        + V+ +   L    +P +   I
Sbjct: 703 TLYEFIWNQFCDWYLELTKP-VLWKGTEAQQHGTRRTLITVLEKTLRLAHPVIPYITETI 761

Query: 474 FDIL-----FVADENRCFQSLDQRLKPGF 497
           +  +      V  E    Q+L Q  +  F
Sbjct: 762 WQSIKPLVEGVEGETIMLQALPQFDEANF 790



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  ++          L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV              P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGNMWHFRYPL 204


>gi|284052168|ref|ZP_06382378.1| leucyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291570532|dbj|BAI92804.1| leucyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 859

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  NKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+  + +  QN    R+    L   I +D  + T    ++   + ++ +    G  Y
Sbjct: 91  IDRGIPPQTWTYQNIAQMREQLQRLGFSIDWDAEVTTCSPEYYRWTQWIFLQFFQAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V    +          V+      +F +++ Y ++LL+  
Sbjct: 151 QKESAVNWDPIDQTVLANEQV---DNEGRSWRSGAIVERKLLRQWFLKITDYAEELLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E  P +   ++           G
Sbjct: 208 EKLPGWPERVKLMQANWIGKSVG 230



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 108/323 (33%), Gaps = 62/323 (19%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y          D SK   W P D +V G +    H +Y   
Sbjct: 494 KRETDTMDTFIDSSWYFLRYPDAQNADQVFDLSKTNDWMPVDQYVGGIEHAILHLLYSRF 553

Query: 278 FL--------LSANLPL------------------------PKKVFSHGFILHK------ 299
           F         L  + P                         P KV ++     +      
Sbjct: 554 FTKVLRDRNLLKFDEPFQRLLTQGMVQGITYKNPKTGKYIPPDKVNTNEPKDPETGDRLQ 613

Query: 300 --GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              EK+SKS  N +DP+ V+E+ G D  R F++ +    KD  +D   ++ +      N 
Sbjct: 614 VFFEKMSKSKYNGVDPLLVMEKYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLNR 671

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
           +  LV+               TP    ++++ +    +  ++E+ E+++ +   + A+++
Sbjct: 672 VWRLVTEFA--ANHSVSSTKSTPENLNKAEKDLRRAINNAIKEVTEDLEGDYQFNTAVSE 729

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L +             L    P + S +     E I  L  LL  F P +   ++  
Sbjct: 730 MMKLSNA------------LSDATPIQDSPIYQ---EGIDTLLKLLAPFSPHITEDLWHQ 774

Query: 477 LFVADENRCFQSLDQRLKPGFML 499
           +   D +   QS         ++
Sbjct: 775 IGHGD-SVHLQSWPTFDPSALVV 796


>gi|170701657|ref|ZP_02892600.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133446|gb|EDT01831.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            E           +   I
Sbjct: 206 LEGLGWPERVKIMQQNWI 223



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 121/362 (33%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+ N      GA  +      +   +++   YF R +A   + +       
Sbjct: 467 SGNPLAKSEAFLNCSCPKCGAAAKRETDTMD--TFVDSSWYFSRYTAPDAETMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 YWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETFY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ V   D             + A L    +       L   EK+S
Sbjct: 580 REDASGKKTWYNPADVTVTHDD---------KGRPVGATLNTDGQPVV----LGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S    + +           A  ++D+++      VL++   + Q    +  ++  + +
Sbjct: 678 VWSFGATNREALAARAGFDAAALGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|209523609|ref|ZP_03272163.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496014|gb|EDZ96315.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 859

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  NKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+  + +  QN    R+    L   I +D  + T    ++   + ++ +    G  Y
Sbjct: 91  IDRGIPPQTWTYQNIAQMREQLQRLGFSIDWDAEVTTCSPEYYRWTQWIFLQFFQAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V    +          V+      +F +++ Y ++LL+  
Sbjct: 151 QKESAVNWDPIDQTVLANEQV---DNEGRSWRSGAIVERKLLRQWFLKITDYAEELLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E  P +   ++           G
Sbjct: 208 EKLPGWPERVKLMQANWIGKSVG 230



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 84/216 (38%), Gaps = 25/216 (11%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    EK+SKS  N +DP+ V+E+ G D  R F++ +    KD  +D   +
Sbjct: 603 PKDPETGDRLQVFFEKMSKSKYNGVDPLLVMEKYGADTARMFILFKAPPEKDLEWDDADV 662

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +      N +  LV+               T G   ++++ +       ++E+ E+++
Sbjct: 663 EGQFR--FLNRVWRLVTEFA--ANHSVSSTKSTTGNLNKAEKDLRRAIHNAIKEVTEDLE 718

Query: 407 -NQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +   + A+++++ L + +  +                        +  E I  L  LL 
Sbjct: 719 GDYQFNTAVSEMMKLSNALSDNSKIQDS-----------------PIYQEGIETLLKLLA 761

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            F P +   ++  +  +D +   QS         ++
Sbjct: 762 PFSPHITEDLWHQIGHSD-SVHLQSWPTFDPSALVV 796


>gi|210614203|ref|ZP_03290098.1| hypothetical protein CLONEX_02311 [Clostridium nexile DSM 1787]
 gi|210150780|gb|EEA81788.1| hypothetical protein CLONEX_02311 [Clostridium nexile DSM 1787]
          Length = 1100

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/503 (12%), Positives = 155/503 (30%), Gaps = 34/503 (6%)

Query: 3   EREKLYISTAIAYP----NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
            ++  Y++              HI  A+    A V  ++      D+ F    DE G+  
Sbjct: 359 NKKAYYVTCDTYVTLTDGTGVVHIAPAFGEDDAQVGRKY------DLPFLQLVDEKGEMT 412

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           A+           F  +      +  +  ++ +D            +    W+  +    
Sbjct: 413 AETPWAGT-----FCKKADPFVLEDLEKRNLLFD------APNFEHSYPHCWRCDTPLIY 461

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEEEGYFFRLS--A 171
             +  +    +   E    ++            G++ +   N   W      ++      
Sbjct: 462 YARESWFIKMTAVKEDLIRNNNKINWIPESIGKGRFGDWLENVQDWGISRNRYWGTPLNV 521

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
           ++ +    +       L     N             +++ K    G ++   P+ ++  W
Sbjct: 522 WECECGHMHSIGSIAELKEMSDNCPDDIELHRPFIDAVTIKCPHCGKEMHRVPE-VIDCW 580

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKK 289
            D+         Y         + +PA+      D     F+++   + L+    P    
Sbjct: 581 FDSGAMPFAQHHYPFENKELFEQQFPANFISEAVDQTRGWFYSLLAISTLIFNEAPYKNV 640

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +         G+K+SKS GN +DP + +E  G DA+R++     A      +    + + 
Sbjct: 641 IVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWYFYVNSAPWLPNRFHGKAVVEG 700

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQN 407
               +           +   +  +D           +  D+ +LS  + +++ + +N+ N
Sbjct: 701 QRKFMGTLWNTYAFFVLYAEIDQFDATKYNLEYDKLSVMDKWLLSKLNTLIKTVDDNLAN 760

Query: 408 QLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             I  +   +   V ++ + Y    +     K                +  +A +    +
Sbjct: 761 YRIPESARALQDFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTVAKVAAPMI 820

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +   I+  L  + +    +S+
Sbjct: 821 PFMTEDIYQNLVRSIDANAPESI 843



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 62/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 93  KEGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 152

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      ++   T     
Sbjct: 153 VEKMLGLDGKEQIEEYGLEPFIAHCKESVWKYKGMWEDFSATVGFWADMENPYVTYHNDF 212

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 213 IESEWWALKQIWDKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYKDVKEKSAIVRFKVKDE 272

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 273 DAYILAWT 280


>gi|331270551|ref|YP_004397043.1| isoleucyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329127101|gb|AEB77046.1| isoleucyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 1025

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 10/288 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K       ++  W D+ +       Y         K +PA       D     F+++   
Sbjct: 492 KEMTRTNEVIDCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGWFYSLLAI 551

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  L         +     +  KG K+SKS GNV+DP +V+E  G DA R+      A  
Sbjct: 552 STALFDTNSYENCIVLGHVLDKKGLKMSKSKGNVVDPFDVLENEGADATRWHFYTASAPW 611

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGMIPTPGAFTESDESILSVC 394
               + +D +K+       + + N+ S  V  + I K          +    D+ I+S  
Sbjct: 612 LPTRFSEDDVKETQ-RKFLSTLWNVYSFYVLYAEIDKFNPTEYKDFVSENVMDKWIISKL 670

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVT 451
           + +++ I EN+ N  I  A   +   V E+ + Y   +  + W  K T+    +      
Sbjct: 671 NTLIKTIGENLDNYKITEAALTLEDFVDELSNWYVRRNRSRFWSTKLTDDKIGA--YTTL 728

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            +V+  L  +   FVP ++ +I+  L V  +    +S+     P + L
Sbjct: 729 HKVLTTLVKVAAPFVPFMSEEIYQNLVVNLDKEAVESVHLCTWPQYNL 776



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 23  EDGEYFTFYDGPPTANGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 82

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++DM++ L      D+   T    +
Sbjct: 83  IEKKLGISGKPQIEEYGVEKFVTECKDSVFKYTSLWKDMSEKLGFWVDMDNPYVTYHNTY 142

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + +K  +YKG     Y  R     +  EV +G  
Sbjct: 143 IESVWWALKTMWEKDLLYKGHRVTPYCPRCGTALSSHEVAQGYK 186


>gi|148358880|ref|YP_001250087.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106927|ref|YP_003618627.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166231618|sp|A5IBJ1|SYL_LEGPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148280653|gb|ABQ54741.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648828|gb|ADG24675.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 823

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  +N    ++    L  +YD    + T +  ++   +  + ++ +KG +Y
Sbjct: 91  IKNKIPPAEWTRKNIAAMKEQFLRLGNAYDWKRELTTCDPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F ++++Y D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITSYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S  E+   +++          G
Sbjct: 207 DSLDEWPAQVKQMQRNWIGKSIG 229



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 134/444 (30%), Gaps = 45/444 (10%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     + +   +DI +D       +         +  +
Sbjct: 330 YGSGAVMAVPAHDQRDWEFAQKYQLPVKQVIKPIDIEHDFNQSAYTEEGILINSNQFDNL 389

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                I         +   +A  N      G   Q Y     P+   E+ G         
Sbjct: 390 LSSKAIQVITNFLEENDAGKATINYRLRDWGVSRQRYWGTPIPMIICEQCGIVPVPDEEL 449

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +L           P+ +  E ++                  G     +       +++
Sbjct: 450 PVVLPENVDFTGTGSPLTQCKEFVNV------------TCPKCGQDATRETD-TFDTFVE 496

Query: 234 ALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSA 282
           +   Y         +     +AK+W P D ++ G +    H +Y   F         +++
Sbjct: 497 SSWYYARFACKGQENAMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFFHKLMRDEGLVNS 556

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  K + + G +L  G K+SKSLGNV+DP  +I   G D  R F++      +   + 
Sbjct: 557 DEPF-KALLTQGMVLKDGHKMSKSLGNVVDPNHLINTYGADTARLFVMFASPPEQSLEWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-----IPTPGAFTESDESILSVCSRV 397
             G++          +     +   M++   D +                +    +  ++
Sbjct: 616 DSGVEGAHR--FLKRVWAFSHQHRDMLIDINDSILSGNGHVDWKEAESRLKKSRHIVHQI 673

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           L +   +      +  ++  + L +E+  Y          +T  D+     +     I  
Sbjct: 674 LAQATHDYDRNQFNTVVSGCMKLFNEISDY--------SIETENDK-----FFIHSSISI 720

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  LL    P + + ++  L    
Sbjct: 721 LLRLLAPITPHICHCLWQQLGFDK 744


>gi|312795138|ref|YP_004028060.1| Leucyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312166913|emb|CBW73916.1| Leucyl-tRNA synthetase (EC 6.1.1.4) [Burkholderia rhizoxinica HKI
           454]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  + + YP+ + H+GH     I DV+ R  R++G +VL   G D  G     AA
Sbjct: 31  DKKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRHRRMNGYNVLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  IANGVPPAKWTYDNIAYMKKQMQAMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            VQ  E   Y+ R++ Y ++LL   
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVVDG----RGWRSGAVVQKREIPMYYLRITDYAEQLLQDL 206

Query: 181 ESHPEFILPIERRNEVI 197
            +          ++  I
Sbjct: 207 HALGWPERVKVMQHNWI 223



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 23/192 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G++             
Sbjct: 623 EKMSKSKNNGVDPQHLIDSHGADTARLFTMFAAPPEQSLEWSSAGVEGASRFLRRLWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              R+        +          ++ +++      VL++   + Q    +  ++  + +
Sbjct: 683 YAHRATFA-----ERPALDTATLNDTSKTLRREIHSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           ++ +                 + A  V   V  E    L  +L   VP +   ++  L  
Sbjct: 738 LNAL-----------------ESAKDVGAAVLYEGYGILLRVLYPVVPHVTYTLWRELGY 780

Query: 480 ADENRCFQSLDQ 491
           A +         
Sbjct: 781 ATQFGTLLDAPW 792


>gi|167618683|ref|ZP_02387314.1| leucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 864

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGAPPAQWTYDNIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D+++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRAPFDV-----AQLAEADKTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVLRETYGVLLRVLYPVVPHVTYELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|84029509|sp|Q899C3|SYI_CLOTE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1036

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/448 (14%), Positives = 144/448 (32%), Gaps = 18/448 (4%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
            D+ G+ I       G+  K    +         D   I Y     T     H       
Sbjct: 341 VDKEGKFIDCVEPWKGMPVKKADSKIIEYM----DEKGILYKSEKFTHS-YPHCWRCDTA 395

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG--YFFR 168
                    +    S    L +     +        G++     N + W       +   
Sbjct: 396 LLYYPTDSWFVRMTSLRDKLLENNNKVNWYPDNIRTGRFGKFLENVIDWGISRDRYWGTP 455

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           L  ++ +            L  +  +              +  K    G ++    + ++
Sbjct: 456 LPIWECECGHRECIGSISELKEKGIDVPEDIELHKPYIDKVKLKCSKCGKEMKRTRE-VI 514

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+ +       Y         K +PA       D     F+ +   +  +    P 
Sbjct: 515 DCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGWFYTLTAISTAIFDTNPF 574

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +   G K+SKS GNV+DP +V++  G DA R+      A      +  + +
Sbjct: 575 ENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLDSAGADASRWHFYTASAPWLPTRFSPEDV 634

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIR 402
           ++       + + N+ S  V  +  D D   P       +    D+ I+S  + +++++ 
Sbjct: 635 EETQ-RKFLSTLWNVYSFYV--LYADIDKFNPLEYKDFVSENVMDKWIVSKLNSLIKDVE 691

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           ++M +  I +A   +   V E+ + Y    +     +   +          +V+  ++++
Sbjct: 692 DHMDSYRITQAALAIEDFVDELSNWYVRRNRSRFWSEELREDKIGAYVTLYKVLTTVSLI 751

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489
              FVP +  +I++ L    +    +S+
Sbjct: 752 AAPFVPFITEEIYNNLVRGLDKNALESI 779



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E           N +PH+GH    +I D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EEGEYFTFYDGPPTANGKPHVGHVLTRVIKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRH 102
            +                       K  V   S  ++DM++ L    D      T    +
Sbjct: 96  IEKKLGISGKEEIEKFGVEEFIKECKDSVFTYSSMWKDMSEKLAFWVDMENPYVTYHNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++ +K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQLWNKELLYKGHKVIPYCPRCGTALSSHEVAQGYK 199


>gi|149907707|ref|ZP_01896454.1| valine tRNA synthetase [Moritella sp. PE36]
 gi|149809377|gb|EDM69306.1| valine tRNA synthetase [Moritella sp. PE36]
          Length = 953

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 117/362 (32%), Gaps = 55/362 (15%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E  +F             +      +P    NE   FV     ++  +   F   +++  
Sbjct: 410 ENMYFSWMNDVQDWCISRQLWWGHRIPAWYDNEGNVFVGRDEAEVR-AENNFGPEVELRQ 468

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           D   ++  W  +     +T G+       K    P+D+ V G DI+ F         +  
Sbjct: 469 DND-VLDTWFSSALWTFSTQGWPQQTQDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMHF 526

Query: 283 --------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-------------- 320
                    +P      +       G+K+SKS GNV+DP+++I+ +              
Sbjct: 527 IKDENGKPQVPFKTVYVTGLVRDEAGDKMSKSKGNVLDPLDMIDGIDLESLVKKRTGNMM 586

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ L    + G+D  +D   L      +  N 
Sbjct: 587 QPKLAKKIEKATRKEFEGGIEAHGTDALRFTLAAMASTGRDINWDMKRLDG--YRNFCNK 644

Query: 358 IGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N  SR V M  +++D         F+ +D  I       ++  RE +    +  A   
Sbjct: 645 LWN-ASRYVLMNTEEHDCGQNGGDMEFSLADRWIQGQFQETIKTYREAIDTYRLDLAANI 703

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                     D Y +  KP         +     Y  V ++  L  L+   +P +  +I+
Sbjct: 704 AYEFTWNQFCDWYLELTKP-VFGNGTEAQLRATRYTLVTILEALQRLMHPIMPFITEEIW 762

Query: 475 DI 476
             
Sbjct: 763 QR 764



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GHA++  I D L R+ R+ GL+ L+  GTD  G       
Sbjct: 31  TKDAYSIMIPPPNVTGSLHMGHAFQQTIMDALTRYKRMQGLNTLWQVGTDHAGIATQMVV 90

Query: 63  QNAGVTT---------------KVFVDQN------SRNFRDMADVLDISYDDFIRTTEKR 101
           +                     K++  +N      +R  R +   +D   + F  T +  
Sbjct: 91  ERKIAAEEDKTRHDYGRDAFIDKIWDWKNESGGTITRQMRRLGTSVDWDRERF--TMDDG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 149 LSEAVKEVFVRLFKEDLIYRGKRLVNWDPKFHTAISDLEVESKEKQGSMWYFRYPL 204


>gi|103486422|ref|YP_615983.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|122985147|sp|Q1GUM2|SYV_SPHAL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|98976499|gb|ABF52650.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 931

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 124/384 (32%), Gaps = 68/384 (17%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           ++    + ++          +         I+P        ++++  ++   +SR+ +  
Sbjct: 380 IEPWLTDQWYVDAEKLAQAPIQAVRDGRIQIVPKTWEKTFFNWME-NIQPWCVSRQLWWG 438

Query: 216 ---------------------------WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
                                       G+ +  DP  ++  W  +      T G+ D+ 
Sbjct: 439 HRIPAWYAEDGRTFVAETEEEAQAEAGAGVILTRDPD-VLDTWFSSALWPFATLGWPDDT 497

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +  K + +P D+ + G DIL F    +          +P              G+K+SKS
Sbjct: 498 ELLK-RHYPNDVLISGFDILFFWDARMAMQGMEFMGEVPWRTLYLHGLVRAPDGQKMSKS 556

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+DPI +I++ G DALR+F+    + G+D   D   L      + A  + N  +R  
Sbjct: 557 KGNVVDPIGLIDQYGADALRFFMCAMESQGRDIKMDDARLAG--YRNFATKLWN-AARFC 613

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
                     +  P A    +  I+   +  +  +           A   + S   +   
Sbjct: 614 EANGIAASTSLEAPAATLPVNRWIIGEVADTVAAVEAAFAAYRFDDAANAIYSFAWDRFC 673

Query: 425 DRYFDAQKPW------------------------------ELKKTNPDRASTVLYVTVEV 454
           D Y +  KP                                L        +    V   V
Sbjct: 674 DWYLELIKPVLSQKPSPLQGRGLGEGDEAVPAPADGPLSPALSPEGEREIAETRAVAGWV 733

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           + Q+ ++L  F+P +  +++  L 
Sbjct: 734 LDQILVMLHPFMPFITEELWTGLG 757



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 53/170 (31%), Gaps = 18/170 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------- 58
              I           HIGHA +  + DVL R+ RL G D L+  GTD  G          
Sbjct: 35  PFTIVNPPPNVTGALHIGHALDNTLQDVLIRYERLRGKDALWVVGTDHAGIATQMVVERQ 94

Query: 59  --AKAAQNAGVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
              +  +    T   FVD+                  L  S D      T +        
Sbjct: 95  LNERQQKRTDFTRDEFVDKVWEWKATSGGQITRQLRRLGCSMDWSREQFTMDPHFTRAVV 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  +  KG IY+      +  + +   +D EV        +     P+
Sbjct: 155 KVFVDLHKKGLIYRDKRLVNWDPKLKTAISDLEVETHEVQGGFWHFKYPL 204


>gi|238927290|ref|ZP_04659050.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884877|gb|EEQ48515.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 823

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y      YP+ + H+GH     I DV+ARF  ++G +VL   G D  G     AA 
Sbjct: 31  KPKYYALEMFPYPSGKLHMGHVRNYSIGDVIARFRTMEGYNVLHPMGFDSFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N       L ++Y  D  + T  + ++   + L++    KG  YK
Sbjct: 91  KNKVHPAEWTYANIANMEKQQRALGLAYDWDREVITCREDYYRWTQWLFELFYKKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +         +++V  G          + V   +   +FF+++ Y D+LL+  +
Sbjct: 151 KKASVNWCDTCGTVLANEQVEDGK----CWRCKSEVHKKDLAQWFFKITDYADELLADLD 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
             P +   ++           GL
Sbjct: 207 KLPGWPERVKTMQANWIGRSEGL 229



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 121/394 (30%), Gaps = 38/394 (9%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           TEK         +  +     +             +   N          Q Y     P+
Sbjct: 379 TEKEGILINSGKFTGMEMHAAMQAIMDEAEAQGCGKRRVNYRLRDWLISRQRYWGAPIPI 438

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               + G            L    S  +  +     +E     K        +R+T    
Sbjct: 439 INCPQCGEVLVPEEELPVRLPEDVSFEQGTVSPLSSSEHFLRCKCPKCGGDATRET---- 494

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
                D              Y          D  K  +W P D ++ G +    H +Y  
Sbjct: 495 -----DTMDTFICSSWYYYRYADPKNTERPFDRDKVNYWAPVDQYIGGIEHAILHLLYAR 549

Query: 277 --------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                   A +L  + P    + + G ++  G K+SKSLGNV+ P E+I+  G D  R F
Sbjct: 550 FFTKVLRDAGMLDFDEPFT-NLLTQGMVIKDGAKMSKSLGNVVSPEEIIDRYGADTARLF 608

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           ++      +D  +   G++          +  ++ +    I            + +  + 
Sbjct: 609 ILFAAPVDRDLDWSDQGVEGAYR--FLGRVWRILGQFAETIKGA--PASCDAASLSTEEA 664

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            +  V    ++++ E++    + + A++ ++ LV+ +  +                    
Sbjct: 665 ELRRVLHATIKKVTEDVRDRFMFNTAISSIMELVNALYAF--------------QDKKLT 710

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +  E    L  +L  F P +  +++  +F  +
Sbjct: 711 PGLARETASALLRMLAPFAPHITAELWAKIFGGN 744


>gi|189083237|sp|A5W9H9|SYL_PSEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 868

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 151 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE  G D  R F++          +   G++         G   
Sbjct: 626 EKMSKSKNNGVDPQSMIEAYGADTCRLFMMFASPPDMSLEWSDSGVE---------GASR 676

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES---ILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +        +P        D++   I       +++   ++      + A+AQ
Sbjct: 677 FLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+++++ +      + P   + T  DRA     +  E +  + +LL    P +++ ++  
Sbjct: 737 VMTVMNVL-----EKAP---QATEQDRA-----LLQEGLEAVTLLLAPITPHISHALWQH 783

Query: 477 LFVADE--NRCFQSLDQR 492
           L  A    +  + S+D++
Sbjct: 784 LGHAGSVIDAAWPSVDEQ 801


>gi|163803709|ref|ZP_02197569.1| valyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172492|gb|EDP57357.1| valyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 957

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/454 (17%), Positives = 149/454 (32%), Gaps = 95/454 (20%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           DE    ++         Y +     ++ M  + ++ R +      +   E+     +P +
Sbjct: 349 DELGLLEEVKDHDLQVPYGDRGGVVIEPMLTDQWYVRTAPLAKTAVEAVENGDIQFVPKQ 408

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N   S+++  ++D  +SR+   WG +IP                              
Sbjct: 409 YENMYFSWMRD-VQDWCISRQ-LWWGHRIPAWYDNQGNVYVGRDEEEVRKNNNLESVIEL 466

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
              + ++  W  +      T G+ +  D  K    P+D+ V G DI+ F         + 
Sbjct: 467 HQDEDVLDTWFSSALWTFGTQGWPEQTDDLKVFH-PSDVLVTGFDIIFFWVARMIMMTMH 525

Query: 282 A--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                     +P      +       G+K+SKS GNV+DPI++I+               
Sbjct: 526 FVKDENGKPQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVEKRCGNM 585

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ L    + G+D  +D   L+     +  N
Sbjct: 586 MQPQLAKKIEKNTRKTFENGIEAYGTDALRFTLAAMASTGRDINWDMKRLEG--YRNFCN 643

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENMQNQLI 410
            + N  SR V M  ++ D    +         ++ +D+ I S      +    ++ N  +
Sbjct: 644 KLWN-ASRYVMMNTEEQDCGFQSSNEQSGEIEYSLADKWIESQFELAAKAFNNHIDNFRL 702

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A   +   +     D Y +  KP  L K    +        + V+ +   L    +P 
Sbjct: 703 DMASNTLYEFIWNQFCDWYLELTKP-VLWKGTEAQQRGTRRTLITVLEKTLRLAHPVIPY 761

Query: 469 LANKIFDIL-----FVADENRCFQSLDQRLKPGF 497
           +   I+  +      V  E    Q+L Q  +  F
Sbjct: 762 ITETIWQSIKPLVEGVEGETIMLQALPQFDEANF 795



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA++  I D L R  R+ G + L+  GTD  G      
Sbjct: 30  TTQDSYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ----------NAGVTTKVFVDQNSRN-------FRDMADVLD--ISYDDFIRTTEKRH 102
            +                + F+D+                  L   + +D    T +   
Sbjct: 90  VERKIAAEEGKTKHDYGREAFIDKIWEWKGESGGTITKQLRRLGASVDWDRERFTMDDGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV              P+
Sbjct: 150 SNAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKDTKGNMWHFRYPL 204


>gi|254446147|ref|ZP_05059623.1| valyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260455|gb|EDY84763.1| valyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 944

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 139/381 (36%), Gaps = 60/381 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E ++ +    ++   +  +   +F    +R  +V     + ++D  +SR+   
Sbjct: 388 PIEPRLSEQWYLKYPKVEEAKAAVEKGIIKFH--PKRWEKVYLHWLNNIQDWCISRQ-LW 444

Query: 216 WG--IKIPD--------------------DPQYI------MYVWIDALTNYLTTTGYLDN 247
           WG  I +                      DP+        +  W  +      T G+ + 
Sbjct: 445 WGQRIPVWYKKGEDRLDSANWHVSVDGPSDPENWEQDEDALDTWASSYLWPFATLGWPNT 504

Query: 248 PDG---SKAKFWPADLHVIGKDILRFHAIYW---------------PAFLLSANLPLPKK 289
            +        F+P    V G DI+ F                        ++A +P    
Sbjct: 505 DEKTLKELEHFYPTSTLVTGFDIIFFWVARMIMAGLELYGDDKKELTDDEIAARIPFKDI 564

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                    KG K+SK+LGN  DP+++IE+ G D LR+ ++     G D  + +D ++  
Sbjct: 565 FIHGLIRDEKGRKMSKTLGNSPDPLDLIEKFGADGLRFGIINIAPSGSDILFSEDRIE-- 622

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESD---ESILSVCSRVLQEIRE 403
           +  + +N + N           D +  +         +  D     ILS     ++EI  
Sbjct: 623 IGRNFSNKLWNACRFRQMNGPADANATLDGILDRLQTSPLDGYSNWILSRMLETMREIEG 682

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
                 + +  + + + V     D Y +A K    KK +P R +  L V+  VIRQ   L
Sbjct: 683 QFAKFEMQQLTSTLYNFVWGDFCDWYVEAAKALLQKKEDP-RHNMALAVSDLVIRQALQL 741

Query: 462 LQAFVPKLANKIFDILFVADE 482
           L   +P +  +++  +   +E
Sbjct: 742 LHPVMPHITEELWHAMGFCEE 762



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 21/177 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDE----HGQK 57
           + +E   I           H+GH  +  + D+  R  RL+G   L+  GTD        K
Sbjct: 68  EGKEPYSIMIPPPNVTGILHMGHVLDNTLQDIFIRRARLEGKSTLWFPGTDHASIATQTK 127

Query: 58  IAKAAQNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRH 102
           + +A +  G +               + D +     +    L  S D + RTT   ++ +
Sbjct: 128 VEQALRAEGTSRREVGREKFLERAWQWSDDHGGKILNQLKKLGASCD-WRRTTFTMDESY 186

Query: 103 HDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             + R  + K+ D+G IY+G     W      A  N++ + K   G+++  ++  V+
Sbjct: 187 ERSVRAAFVKLYDRGYIYRGKRLVNWCPSSQTALSNEEVIMKPQKGKFWKMRYELVE 243


>gi|73748800|ref|YP_308039.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|84029515|sp|Q3ZY20|SYI_DEHSC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|73660516|emb|CAI83123.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 1014

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 144/410 (35%), Gaps = 22/410 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQ 153
            +R H T    W+  S      K   Y    ++RDE    + ++        DG++ +  
Sbjct: 411 NERMHHTYPFCWRCDSPLIYYAKQSWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDWL 470

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            N + W      ++       +     ++     +   +       ++  L         
Sbjct: 471 ENNIDWAFSRERYWGTPVPIWRCEKCGQTECVGGIDELKAKPNFKGMQEKLDIHRPYADE 530

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPADLHVIGKD 266
           + +              +M  W D+    +    Y   P     +    +PAD      D
Sbjct: 531 WTYDCAKCGGNMKRVTEVMDCWYDSGAMPVAQYHYPFEPESRTIASDGRFPADYICEAVD 590

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++++  + L+         +     +  +GEK+SKS  NVI P  V+++ G DA
Sbjct: 591 QTRGWFYSLHAISTLIFGRPCYQNVICLGHILDERGEKMSKSKNNVIQPAAVLDKYGADA 650

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           +R++       G    +  + L   V       + N+ S  V+    + D   P+     
Sbjct: 651 VRWYFYTAAPPGNARRFS-EKLVGEVTRQFLLMLWNIYSFFVT--YANIDNFTPSEKYLA 707

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT 439
           G   E D  ILS  ++++ ++ + + N    +A  ++   V  + + Y    +    K  
Sbjct: 708 GEVPELDRWILSELNQLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSE 767

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           N     +        +  L+ LL  F P +A +++  L +  +    +S+
Sbjct: 768 NDADKLSAYQALYTCLVTLSKLLAPFTPFVAEELYQNLVLLVDQSALESV 817



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ ++  +       N +P I H    +  DV+ R+  + G       G D HG  +   
Sbjct: 36  RDGKRFTLYEGPPTANGRPGIHHVLSRVFKDVIPRYKVMKGYYAPRIGGWDTHGLPVELE 95

Query: 62  AQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                         +   +V + ++    +A  +D+  D+   T + 
Sbjct: 96  VEKELGFTSKNDIEKYGIAEFNTRCRSSVFKYVSEWNKLTERIAYWVDL--DNAYITMDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ ++     K++ DKG +Y+G     +  R     +  EV +G  
Sbjct: 154 KYIESGWWALKQMWDKGLVYQGHRVTPHCPRCGTSLSSHEVAQGYK 199


>gi|313886594|ref|ZP_07820307.1| valine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923950|gb|EFR34746.1| valine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 887

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 82/417 (19%), Positives = 149/417 (35%), Gaps = 55/417 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            EA   D E        Y       ++      +F ++S      L         ++P +
Sbjct: 333 KEAGLLDHEEDYNNRVGYSERTDVAIEPKLSMQWFLKMSELAKPALQAVLEDTVQLVPKK 392

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N    +    +KD  +SR+   WG +IP                              
Sbjct: 393 FVNT-YRYWLENIKDWCISRQ-LWWGHRIPAYYLPNGQFVVAATAEEALAKAKQETGDNS 450

Query: 222 ------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFH-- 271
                       +  W  +    ++  G +D  + ++    F+P  + V G DIL F   
Sbjct: 451 LTIEQLSQESDCLDTWFSSWLWPISLFGKIDGSEPTEDLKYFYPTSVLVTGPDILFFWVA 510

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +    +    + P  K   +      KG K+SKSLGN  DPI+++++ G D +R  L+ 
Sbjct: 511 RMIMAGYHFMGDRPFDKVYLTGIVRDDKGRKMSKSLGNSPDPIDLMDKYGADGVRLGLMM 570

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G D  YD+  +++    +  N I N      +  + D    +    A   + E   
Sbjct: 571 ATSAGNDLLYDESLVEQ--GRNFCNKIWNSYRFLKTQSVSD---EVKPDAASLIAMEWFE 625

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S+ +  + E+ +      I  A+  +  LV +     Y +A KP     T+  R   V  
Sbjct: 626 SLLASTMSELDDLFDKYRISDAVTLLYKLVRDDFSGIYLEAIKP--AYGTSMSRK--VYE 681

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
            T+    Q+ ILL  F+P +  +++  +      E+  +  LD  L+    L    +
Sbjct: 682 RTIHYFEQIFILLHPFMPFITEELWQDVAPRQEGESIMYAHLDDTLQADKQLLADME 738



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 40  SKKPYTIIMPPPNVTGVLHMGHMLNNTIQDILIRRARISGYNACWVPGTDHASIATEAKV 99

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
                                    + D+           L +S D + RT    ++   
Sbjct: 100 VEQLAKQGIQKNQLTREDFLKHAWEWTDKYGGIILSQLRRLGVSCD-WSRTAFTLDEERS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++   ++ K+ ++G IY+G     +  + +   +D+EV  
Sbjct: 159 ESVINVFCKLYEEGFIYRGVRVVNWDPKAQTALSDEEVIF 198


>gi|294101689|ref|YP_003553547.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616669|gb|ADE56823.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 828

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 77/203 (37%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y      YP+   H+GH     I D++ARF  ++G +VL   G D  G     AA
Sbjct: 29  SKKKFYCLEMFPYPSGALHMGHLRNYSIGDMMARFLWMNGYNVLHPMGFDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N     D    +  SY  D  + T    ++   + ++ +   KG  Y
Sbjct: 89  LKYGVQAHEWTHKNIEQMTDQLKRMGCSYDWDRRVETCNPDYYRWTQWIFLQFFKKGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V            ++PV   + E +FFR++ Y  +LL   
Sbjct: 149 RKKAPVNWCESCNTVLANEQVDSEGKCWRC---NSPVIKKKLEQWFFRITDYAQELLDDL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   +            G
Sbjct: 206 DQLPGWPERVRIMQRNWIGRSEG 228



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 127/362 (35%), Gaps = 52/362 (14%)

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR-----NEVISFV 200
            G+        V +   +    R   +   +   Y  H   +   E+         ++  
Sbjct: 406 WGEEKGFCTREVNFRIRDWLISRQRYWGAPIPIVYCDHCGMVPVPEKDLPVLLPTNLTVK 465

Query: 201 KSGLKDLSLSRKTFDWGIKIP-------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           + G   L+ +    +    +         D              Y+         +   A
Sbjct: 466 EGGRSPLAEADDWVNTTCPVCGGHARREVDTMDTFICSSWYQFRYVDPRNDKKVFETDLA 525

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            +W P D ++ G +    H IY   F          +A  P    + + G ++  G K+S
Sbjct: 526 NYWMPVDQYIGGIEHACMHLIYSRFFTKVFADLGLCNAREPF-SNLLTQGMVIKDGAKMS 584

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGNV+DP E+I++ G D  R F++     G D  + + G++         G+   ++R
Sbjct: 585 KSLGNVVDPDEIIQKFGADTARLFILFAAPPGNDLEWSEQGVE---------GVHRFLNR 635

Query: 365 SVSMI------LKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
               I      LK+        G+    D         + ++++  ++ + +  + A+A+
Sbjct: 636 VWRYIEENLEGLKNASMERVEMGSLVNKDRRDFKRKIHKTIEDVTRDIQEERQFNTAVAR 695

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L++       +  P    K   D       +  E +  L + L  F P +  +++ +
Sbjct: 696 LMELLNS----IYSCSP----KDEKD-----WGLLREGVEVLLMCLNPFCPHITEELWQM 742

Query: 477 LF 478
           L 
Sbjct: 743 LG 744


>gi|223889484|ref|ZP_03624070.1| valyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885170|gb|EEF56274.1| valyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKSLLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFAEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|148654888|ref|YP_001275093.1| isoleucyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566998|gb|ABQ89143.1| Isoleucyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 1069

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 128/394 (32%), Gaps = 67/394 (17%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +      P+ +  +  ++ R +A +D+L++   +     +P   R           
Sbjct: 395 HSYPFCWRCDTPLLYYAKRSWYIRTTAMKDRLVAN--NRLINWVPEHIREGRFGNWLENN 452

Query: 205 KDLSLSRKTFDWGIKI-----------------------------------------PDD 223
            D ++SR+   WG  I                                           D
Sbjct: 453 IDWAVSRER-YWGTPIPIWVAEDGYAECIGSLAELEQKVGRSLKDLDLHRPYVDELTWVD 511

Query: 224 PQY--------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
           PQ+        +   W D+    +    Y             AD      D     F+ +
Sbjct: 512 PQHGLMRRIPDVADCWFDSGAMPVAQWHYPMENAEIYELAKQADYICEAVDQTRGWFYTL 571

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  + LL         +     +  +G+K+SKS GNV+DP  V+ E G DALR++L    
Sbjct: 572 HALSTLLFDRPAFKNVICLGHILDAEGQKMSKSRGNVVDPWMVMNEHGADALRWYLFTAA 631

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---------TPGAFT 384
             G    +   GL           + N  +  V+    + DG  P          P   T
Sbjct: 632 PPGSPRRFS-AGLVAESLRKFLLTLWNTYAFFVT--YANLDGWSPGNNGVAEHLDPATLT 688

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR- 443
             D   L+  + +++++    +   +  A   +   V E+  ++  +      K+  DR 
Sbjct: 689 PIDRWALARLNSLVRDVTAAFEAYDVTTAGRAIEDFVDELSNWYVRRNRRRFWKSEHDRD 748

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                      +  +A L+  F+P +A+ I+  L
Sbjct: 749 KQAAYATLYTCLLTVAKLVAPFIPFVADAIYRNL 782



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 25/163 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAKAAQ 63
           +           N +P I HA   I  DV+ R+  + G  ++    G D HG  +    +
Sbjct: 38  KPFVFYEGPPTANGRPGIHHAISRIFKDVICRYRAMQGYRIIGRREGWDTHGLPVEIEVE 97

Query: 64  NA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                                    +   ++    +  R +A    +S D +I T E  +
Sbjct: 98  KKLGFSGKPDIEKYGVAEFNAQCRKSVWEYIQDWRQFTRRIAYW--VSDDAYI-TYENDY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            ++   +++++ D+G +++      +  R     +D EV  G 
Sbjct: 155 IESLWWIFRQLWDRGLLFRDYKVSMHCPRCGTSLSDHEVSLGF 197


>gi|15595083|ref|NP_212872.1| valyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|226321435|ref|ZP_03796962.1| valyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|3915080|sp|O51680|SYV_BORBU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2688666|gb|AAC67078.1| valyl-tRNA synthetase (valS) [Borrelia burgdorferi B31]
 gi|226233231|gb|EEH31983.1| valyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKSLLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFAEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|149378126|ref|ZP_01895845.1| valyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357571|gb|EDM46074.1| valyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 956

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/401 (16%), Positives = 129/401 (32%), Gaps = 87/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          +   E      +P +  N   ++++  ++D  +SR+   W
Sbjct: 378 IEPMLTDQWFADAKTLAKPAIEAVEDGRIQFVPKQYENMYFAWMRD-IQDWCISRQ-LWW 435

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 436 GHRIPAWYDAEGNIYVGRSEEEVRQKHNLAADLQLNQDDDVLDTWFSSALWTFGTLGWPE 495

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K    P ++ V G DI+ F         +           +P      +      
Sbjct: 496 ITERLKTFH-PTNVLVTGFDIIFFWVARMIMMTMHFMKNEDGTPQVPFKTVYVTGLIRDE 554

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVD----------------------------------- 323
            G+K+SKS GNVIDP+++I+ +G+D                                   
Sbjct: 555 HGDKMSKSKGNVIDPLDMIDGIGLDDLLEKRTGNLMQPKLAEKIGKRTQKEFPEGITAHG 614

Query: 324 --ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
             ALR+ L      G+D  +D   L+     +  N + N  +R V M  +  D  +    
Sbjct: 615 TDALRFTLSAMATTGRDINWDMKRLEG--YRNFCNKLWN-AARYVLMNTEGEDCGVNGEA 671

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I+S      Q++  ++       A   +   +     D Y +  KP  L  
Sbjct: 672 VELSLADRWIISELQTCEQDVIRHLDQYRFDLAAYALYEFIWNEYCDWYLELSKP-ALND 730

Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N   +         V V+  +  L    +P +  +I+  +
Sbjct: 731 DNASAEAKRGTRRTLVRVLEAVLRLAHPIMPFITEEIWQRI 771



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 19/181 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I+          H+GHA++  I D L RF R+ G + L+  GTD  G       
Sbjct: 35  EGESFSIAIPPPNVTGSLHMGHAFQHTIMDTLTRFKRMQGRNALWQVGTDHAGIATQMVV 94

Query: 63  QNAGVTTKVFVDQ---NSRNFRDMADV----------------LDISYDDFIRTTEKRHH 103
           +      +             + + D                   + +D    T +   +
Sbjct: 95  ERKLAAEEDKTRHDLGREEFIKRIWDWKTQSGGTITGQIRRLGNSVDWDHERFTMDDGFY 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              + ++ ++ D+G +Y+G     +  +     +D EV    +  ++     P+   E+ 
Sbjct: 155 KAVQEVFIRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEEKGFFWHLRYPLADGEKT 214

Query: 164 G 164
            
Sbjct: 215 Q 215


>gi|26991474|ref|NP_746899.1| leucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|32130172|sp|Q88DN1|SYL_PSEPK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24986552|gb|AAN70363.1|AE016678_4 leucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313500773|gb|ADR62139.1| LeuS [Pseudomonas putida BIRD-1]
          Length = 868

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 151 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE  G D  R F++          +   G++         G   
Sbjct: 626 EKMSKSKNNGVDPQSMIEAYGADTCRLFMMFASPPDMSLEWSDSGVE---------GASR 676

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES---ILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +        +P        D++   I       +++   ++      + A+AQ
Sbjct: 677 FLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+++++ +      + P   + T  DRA     +  E +  + +LL    P +++ ++  
Sbjct: 737 VMTVMNVL-----EKAP---QATEQDRA-----LLQEGLEAVTLLLAPITPHISHALWQH 783

Query: 477 LFVADE--NRCFQSLDQR 492
           L  A    +  + S+D++
Sbjct: 784 LGHAGSVIDAAWPSVDEQ 801


>gi|289432820|ref|YP_003462693.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946540|gb|ADC74237.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 1014

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 144/410 (35%), Gaps = 22/410 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQ 153
            +R H T    W+  S      K   Y    ++RDE    + ++        DG++ +  
Sbjct: 411 NERMHHTYPFCWRCDSPLIYYAKQSWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDWL 470

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            N + W      ++       +     ++     +   +       ++  L         
Sbjct: 471 ENNIDWAFSRERYWGTPVPIWRCEKCGQTECVGGIDELKAKPNFKGMQEKLDIHRPYADE 530

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPADLHVIGKD 266
           + +              +M  W D+    +    Y   P     +    +PAD      D
Sbjct: 531 WTYDCAKCGGNMKRVTEVMDCWYDSGAMPVAQYHYPFEPESRTIASDGRFPADYICEAVD 590

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++++  + L+         +     +  +GEK+SKS  NVI P  V+++ G DA
Sbjct: 591 QTRGWFYSLHAISTLIFGRPCYQNVICLGHILDERGEKMSKSKNNVIQPATVLDKYGADA 650

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           +R++       G    +  + L   V       + N+ S  V+    + D   P+     
Sbjct: 651 VRWYFYTAAPPGNARRFS-EKLVGEVTRQFLLMLWNIYSFFVT--YANIDNFTPSEKYLA 707

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT 439
           G   E D  ILS  ++++ ++ + + N    +A  ++   V  + + Y    +    K  
Sbjct: 708 GEVPELDRWILSELNQLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSE 767

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           N     +        +  L+ LL  F P +A +++  L +  +    +S+
Sbjct: 768 NDADKLSAYQALYTCLVTLSKLLAPFTPFVAEELYQNLVLLVDQSALESV 817



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ ++  +       N +P I H    +  DV+ R+  + G       G D HG  +   
Sbjct: 36  RDGKRFTLYEGPPTANGRPGIHHVLSRVFKDVIPRYKVMKGYYAPRIGGWDTHGLPVELE 95

Query: 62  AQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                         +   +V + ++    +A  +D+  D+   T + 
Sbjct: 96  VEKELGFTSKNDIEKYGIAEFNTRCRSSVFKYVSEWNKLTERIAYWVDL--DNAYITMDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ ++     K++ DKG +Y+G     +  R     +  EV +G  
Sbjct: 154 KYIESGWWALKQMWDKGLVYQGHRVTPHCPRCGTSLSSHEVAQGYK 199


>gi|167035836|ref|YP_001671067.1| leucyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083147|sp|B0KJW8|SYL_PSEPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166862324|gb|ABZ00732.1| leucyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 868

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 151 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 28/198 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE  G D  R F++          +   G++         G   
Sbjct: 626 EKMSKSKNNGVDPQSMIEAYGADTCRLFMMFASPPDMSLEWSDSGVE---------GASR 676

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDES---ILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +        +P        D++   I       +++   ++      + A+AQ
Sbjct: 677 FLRRVWRLAQAHVSQGLPGKLDVATLDDAQKVIRRAIHAAIKQASTDVGQFHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+++++ +      + P   + T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 737 VMTVMNVL-----EKAP---QATEQDRA-----LLQEGLEAVTLLLAPITPHISHELWQQ 783

Query: 477 LFVADE--NRCFQSLDQR 492
           L  A    +  + S+D++
Sbjct: 784 LGHAGSVIDAAWPSVDEQ 801


>gi|107021731|ref|YP_620058.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688677|ref|YP_834300.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123245293|sp|Q1BZ70|SYL_BURCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230614|sp|A0K4I0|SYL_BURCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|105891920|gb|ABF75085.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646766|gb|ABK07407.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 864

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++             
Sbjct: 623 EKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R        +D          ++D+++      VL++   + Q    +  ++  + +
Sbjct: 683 YGNREALAARAGFD-----AATLGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|330811915|ref|YP_004356377.1| Leucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380023|gb|AEA71373.1| Leucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 868

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIAYMKTQLRSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 207 DELTGWPEQVKTMQRNWIGKSRGM 230



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 116/396 (29%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + S A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYQGGLVEKSAADHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVSSNEPFKNLLTQGMVIAETYYRREANGAYTWFN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       ++  G        EK++KS  N +DP  +I++ G D  R F+
Sbjct: 595 PSDVELERDSKAKVISAKLIADGLPVEIGGTEKMAKSKNNGVDPQSMIDQFGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++              + R   +        +P      +  + 
Sbjct: 655 MFASPPDMSAEWSDSGVEGSH---------RFLKRVWRLAQAHVTQGLPGKLDVASLNDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            ++I       +++   ++ QN   + A+AQV++L++ +++          + T  DRA 
Sbjct: 706 QKAIRRSIHLAIKQASHDVGQNHKFNTAIAQVMTLMNVLEK--------AAQGTEQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  + +LL    P +++++++ L  AD
Sbjct: 757 ----LVHEGLEAVTLLLAPITPHISHELWNQLGHAD 788


>gi|282879890|ref|ZP_06288617.1| valine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306284|gb|EFA98317.1| valine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 879

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 124/393 (31%), Gaps = 54/393 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +          Y    H P++      +F ++  + D  L           P + +N 
Sbjct: 330 LMEKVEDYNNKVGYSERTHVPIEPKLSTQWFLKMQHFADLALQPVMDDDIQFYPSKYKNT 389

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP---------------------------------- 221
                   +KD  +SR+   WG +IP                                  
Sbjct: 390 -YRHWLENIKDWCISRQ-LWWGHRIPAYYFTVNGKQEVVVAETAEAALKLAQQKDCALTM 447

Query: 222 ---DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYW 275
              +     +  W  +    ++    ++NPD  +   ++P    + G DI+ F    +  
Sbjct: 448 NDIEQDSDCLDTWFSSWLWPISLFDGINNPDNKEIQYYYPTADLITGPDIIFFWVARMIM 507

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +     +P     F+       G K+SKSLGN  DPI +I++ G D +R  ++     
Sbjct: 508 AGYEYKGQMPFRHVYFTGIVRDKLGRKMSKSLGNSPDPIALIDKYGADGVRMGMMLSAPA 567

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+   ++  N        N +  +  ++          P     +     +   
Sbjct: 568 GNDILFDESLCEQGRN------FNNKIWNAFRLVKGWEVTDTEQPQTSKLATAWFEAKLR 621

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +E+ +      I  AL  V  L  +     Y +  KP      +          T+ 
Sbjct: 622 TTNEEVNDLFSKYRISEALMVVYRLFWDEFSSWYLEMIKPAYGTPIDTK----TYQQTLN 677

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               L  +L  F+P +  +++  L+   E    
Sbjct: 678 FFDILLKMLHPFMPFITEELWQHLYERKEGESI 710



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREAYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  ++          L  S  +D    T +++  +
Sbjct: 92  VARLAEQGIKKTDLSRDEFLKHAWDWTHEHGGIILKQLRRLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYNKGLIYRGVRMVNWDPQAQTALSDEEVIYQDEH 194


>gi|170731974|ref|YP_001763921.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254246337|ref|ZP_04939658.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688589|sp|B1JVG9|SYL_BURCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124871113|gb|EAY62829.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169815216|gb|ACA89799.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 864

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++             
Sbjct: 623 EKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R        +D          ++D+++      VL++   + Q    +  ++  + +
Sbjct: 683 YGNREALAARAGFD-----AATLGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|206561710|ref|YP_002232475.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693126|sp|B4EEW1|SYL_BURCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|198037752|emb|CAR53696.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 864

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++             
Sbjct: 623 EKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R        +D          ++D+++      VL++   + Q    +  ++  + +
Sbjct: 683 YGNREALAARAGFD-----AATLGDADKALRREIYSVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +D                        V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAIDG----------------AKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|78065216|ref|YP_367985.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123729057|sp|Q39JM5|SYL_BURS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77965961|gb|ABB07341.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 864

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+ 
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLND 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++         G   
Sbjct: 623 EKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASR 673

Query: 361 LVSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    + +           A  E+D+++      VL++   + Q    +  ++ 
Sbjct: 674 FLRRVWSFGAANREALAARAGFDAAALGEADKALRREIYSVLKQADFDYQRLQYNTVVSA 733

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  E    L  +L   VP +  +++  
Sbjct: 734 AMKMLNAIDG----------------AKGATPGVLRETYGVLLRVLYPVVPHVTFELWKA 777

Query: 477 LFVADE 482
           L  ADE
Sbjct: 778 LGYADE 783


>gi|302206715|gb|ADL11057.1| Valyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
          Length = 911

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 118/372 (31%), Gaps = 58/372 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+                 I P         +V   + D  +SR+   W
Sbjct: 369 IEPRLSLQWFVRVEELAAMAGDAVRQGDTVIHPKSAEPRYFEWVDD-MHDWCISRQ-LWW 426

Query: 217 G--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNPD 249
           G  I I   P+                          ++  W  +     +T G+ +   
Sbjct: 427 GHRIPIWYGPEDADGQRDIVCVGPDEQAPEGYTQDPDVLDTWFSSALWPFSTMGWPEKTP 486

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA----------------NLPLPKKVFSH 293
               KF+P  + V   DIL F       F   A                 +P        
Sbjct: 487 -ELEKFYPTSVLVTAYDILFFWVARMMMFGTLASESTPELLGKGRDGRPQVPFTDLFLHG 545

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                 G K+SKSLGN IDP++ +E  G DALR+ L R    G D    +D  +   N  
Sbjct: 546 LVRDEHGRKMSKSLGNGIDPMDWVERFGADALRFTLARGANPGVDLPVGEDSAQSSRN-- 603

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            A  + N  ++   M       + P     +++D  IL    +V  ++          + 
Sbjct: 604 FATKLYN-ATKFALMNGARVGDL-PAREELSDADRWILDRLEQVRAQVDSYFDRYQFAKG 661

Query: 414 LAQVISLVS--EVDRYFDAQK---PWELKKTNPD---RASTVLYVTVEVIRQLAILLQAF 465
              +   V     D Y +  K   P ++    P+   R      V  +V+  +  +L   
Sbjct: 662 NEALYQFVWGEFCDWYLEFAKVQIPRDVDSATPEERKRGENTQLVLGQVLDAVLRMLHPA 721

Query: 466 VPKLANKIFDIL 477
           +  +   ++  L
Sbjct: 722 MLFVTEVLWKAL 733



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I         Q H+GHA +  + D +AR  R+ G +VL+  G D  G      
Sbjct: 46  SSKPPFSIVLPPPNVTGQLHMGHALDHTLMDSIARRKRMQGFEVLWLPGMDHAGIATQTK 105

Query: 62  -----------------AQNAGVTTKVFVDQN----SRNFRDMADVLDISYDDFIRTTEK 100
                             +        + ++      +  R + D +D S + F  T ++
Sbjct: 106 VEAMLKEKEGKSRWDYDREEFIGHVWDWKNEYGGTIGKQMRAIGDSVDWSRERF--TLDE 163

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K++ D+G IY+      +S   E   +D EV  
Sbjct: 164 GLSRAVQTIFKQMYDRGMIYQANRLVNWSPVLETAVSDIEVVY 206


>gi|126662643|ref|ZP_01733642.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126626022|gb|EAZ96711.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 1147

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 98/280 (35%), Gaps = 10/280 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y           + +PAD    G D     F+ ++
Sbjct: 609 KPMKRESDLIDVWFDSGSMPYAQWHYPFENKEKIDGNQDFPADFIAEGVDQTRGWFYTLH 668

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L+   +     V +   +   G+K+SK LGN +DP   + E G DA R++++    
Sbjct: 669 AIGTLVFDKIAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFTTLAEYGPDATRWYMISNAN 728

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D +G+ + V       + N  S        D   Y+          E D  IL
Sbjct: 729 PWDNLKFDIEGVAE-VRRKFFGTLYNTYSFFSLYANIDGFKYNEAEVPLQERPEIDRWIL 787

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + ++Q + E        +A   +   V E   + Y    +    K            
Sbjct: 788 SELNTLIQVVDEAYAEYEPTKAARAISDFVQENLSNWYVRLCRRRFWKGEYAQDKIAAYQ 847

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                +  +A L     P   +K++  L  A  +  F+S+
Sbjct: 848 TLYTCLLTVAKLSAPIAPFFMDKLYRDLTQATGSESFESV 887



 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 53/150 (35%), Gaps = 19/150 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV- 71
               N  P I H     I D+  R+    G  V    G D HG  +    +     TK  
Sbjct: 49  PPSANGLPGIHHVMARAIKDIFCRYKTQKGYQVKRKAGWDTHGLPVELGTEKELGITKED 108

Query: 72  ----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                            V + +  + D+ + +   +  +D   T + ++ ++   L K+I
Sbjct: 109 IGKTISVTEYNEACKRTVMRYTDVWNDLTEKMGYWVDMEDPYVTYKSKYMESVWWLLKQI 168

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +K  +YKG     YS +     +  EV +
Sbjct: 169 YNKDLLYKGYTIQPYSPKAGTGLSSHEVNQ 198


>gi|319404814|emb|CBI78415.1| Leucyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 874

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 88/238 (36%), Gaps = 7/238 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E EK Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 32  EHEKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKRAKGFHVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  KV+   N +  R     L  S D      T +  ++   ++L+     KG I 
Sbjct: 92  MQNKVHPKVWTYDNIKVMRKQLQQLGFSLDWSREFATCDVDYYHRQQMLFLDFYQKGLIA 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +FF++S + D LL+  
Sbjct: 152 RQVAKVNWDPVDQTVLANEQVVDG----RGWRSGALVEQRELTQWFFKISDFSDDLLAGL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG-LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           E+  ++   +    +       G L   +L +      +    D         + L  
Sbjct: 208 ETLDQWPEKVRIMQKNWIGKSQGLLIRWALHKTNIVDDVCDAFDEIVCYSTRPETLFG 265



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 93/258 (36%), Gaps = 41/258 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW--PADLHVIGKDILRFHAIYWPAFLLSANL 284
           I YV +D     L T G + +      K W  PAD+ ++ KD                  
Sbjct: 570 IGYVSVDEPFKGLFTQGMVVHETYQDEKGWVSPADVAIVEKD---------------GKR 614

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K        +   EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + 
Sbjct: 615 HAYKLTDQSEVRIGSIEKMSKSKKNVVDPDDIIASYGADTVRWFMLSDSPPERDVIWSES 674

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++          +  LV+ S  ++ +          A   S         R L  + ++
Sbjct: 675 GIEGAHR--FVQRVWRLVALSAPVLKEAKSCAGQQGAALELS-----KAAHRTLCAVEDD 727

Query: 405 MQNQLIHRALAQVISL----VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++    +RA+A++  L     S ++            +   D   +      + +     
Sbjct: 728 LEKLAFNRAVARLYELLNVIASSLNN----------IENAEDEMKSA---LRQAMDFFIA 774

Query: 461 LLQAFVPKLANKIFDILF 478
           ++   +P LA +    L 
Sbjct: 775 MIAPMMPHLAEECHAALG 792


>gi|320582633|gb|EFW96850.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia angusta
           DL-1]
          Length = 1045

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 119/357 (33%), Gaps = 49/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y ++ E         +     ++  +    + K F       +  
Sbjct: 505 WCISRQLWWGHRCPVYFANIEGENNDRNDGKYWFSGRNETEAREKAEKAFPGKNFTLEQD 564

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+         KF+P  +   G DIL F    +      ++ 
Sbjct: 565 EDVLDTWFSSGLWPFSTLGWPHKTK-DMEKFYPMSMLETGWDILFFWVSRMIMLGIKMTG 623

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
            +P  K+VF H  +   +G K+SKSLGNVIDP +VI  + ++ L   L+      ++   
Sbjct: 624 TVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPTDVIHGISLEDLHKQLLAGNLDSREIEK 682

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I       +
Sbjct: 683 AKAGQKESYPNGIPECGTDALRFALCAYTTGGRDINLDILRVAGYRKFCNKIFQATKFVL 742

Query: 367 SMILKDYDGMIPTPGAFT----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
             +  DY    P  GA        ++ IL   S+  +++ + +  +  + A   + +   
Sbjct: 743 MRLGDDY--TPPPTGALNGGEALVEKWILHKLSKCSEKVNKALDEREFYDATQAIYNFWL 800

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +  K   L+ T+  +  +        I     L+  F+P +  +++  L
Sbjct: 801 YDLCDVYIENSKFLILEGTDSQK-KSARDTLYTCIDSALRLIHPFMPFVTEEMWQRL 856



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 124 FCIPAPPPNVTGALHIGHALTVAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKNL 183

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + +   +  +    ++  SYD      T      +   
Sbjct: 184 WAKEKITRHDLGREAFVEKVWDWKEIYHKKIKSQFQMMGASYDWTREAFTLSPELSEAVT 243

Query: 108 ILWKKISDKGDIYK 121
             + ++ ++G IY+
Sbjct: 244 ETFVRLHEEGTIYR 257


>gi|198282759|ref|YP_002219080.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667702|ref|YP_002424955.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247280|gb|ACH82873.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519915|gb|ACK80501.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 821

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 7/202 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y      YP+ Q H+GH     IAD +AR+ R+ G +V+   G D  G     AA  
Sbjct: 34  DKFYALAMFPYPSGQLHMGHVRNYSIADAIARYQRMLGKEVMQPMGWDAFGLPAENAALK 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +   N  + R     L +SYD      T    ++   + L+ K+ +KG +Y+ 
Sbjct: 94  HGLAPAQWTMDNIAHMRGQLQRLGLSYDWSREFATCTPDYYRWEQWLFVKLWEKGLVYQK 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V  G           PV+  E   YF R++AY ++LL+  ++
Sbjct: 154 LSTVNWDPVDQTVLANEQVVDG----CGWRSGAPVERKEIVQYFLRITAYAEELLTGLDT 209

Query: 183 -HPEFILPIERRNEVISFVKSG 203
               +   +            G
Sbjct: 210 LGEGWPEQVLTMQRNWIGRSEG 231



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 94/268 (35%), Gaps = 35/268 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLL----- 280
           M  ++++   Y             +  A + P D +V G +    H +Y   F       
Sbjct: 495 MDTFVESSWYYARFACPDAGQMLDQRAADWLPVDQYVGGVEHAVLHLLYARFFNRLLRDV 554

Query: 281 ------SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                  A+    + + + G +L  G K+SKS GN +DP  +I+  G D  R F++    
Sbjct: 555 GLLPADGAHDEPFRHLLTQGMVLKDGSKMSKSKGNTVDPQGLIDRYGADTARLFILFAAP 614

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +   +    ++         G    ++R   ++ +        P   +     +    
Sbjct: 615 PEQHLEWSDSAVE---------GAYRFLNRFWRLVHEYGATPPAVPAELSAEAVDLRRAV 665

Query: 395 SRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + +  +  NM      + A+A ++ L +             L K   D  + +  V  E
Sbjct: 666 HQCIDRVSRNMDGRYHFNVAIAAIMELTN------------SLMKVPADAPADLRAVLGE 713

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD 481
            +R   +LL  F P +A  ++  +  + 
Sbjct: 714 GLRASTLLLAPFAPHIAEVLWQKMGQSG 741


>gi|225549897|ref|ZP_03770858.1| valyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369356|gb|EEG98808.1| valyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNSENIDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFSEKEDILAL 704



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|300709408|ref|YP_003735222.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123091|gb|ADJ13430.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 885

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ R+ G +VL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMTGDEVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        R     +   Y  D  I T    ++   + L+++  ++G + +    
Sbjct: 96  NPRDWTMDCIETMRGQMKSMGFGYDWDREITTCTPEYYKWNQWLFERFHEEGLVERRDAE 155

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V    + +       PV   E E +F  ++ Y D+LL   +    
Sbjct: 156 VNWCPNCETVLADEQVE--GEDELCWRCGTPVVQRELEQWFLSITEYADELLEAIDDLEG 213

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 214 WPNSVRQMQRNWIGRQYG 231



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 103/346 (29%), Gaps = 50/346 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV    + G            L  + +     L      +  +    
Sbjct: 419 WGISRQRYWGTPIPVVHCPDCGPVMVPEEDLPVELPEFVNTTGNPLDATEEWKETTCPAC 478

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G      +            D              Y++        D  +A  W P D +
Sbjct: 479 GGPAERET------------DTMDTFVDSSWYFLRYVSPDLDEAPFDRERANDWMPVDQY 526

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y   F         L    P  + + + G +  +GEK+SKS GN + P
Sbjct: 527 VGGIEHAVMHLLYSRFFTKVLADHEGLEHREPF-RNLLAQGMVQLEGEKMSKSKGNTVSP 585

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++EE G D  R F+++     +D  + ++G+  R        +   V         + 
Sbjct: 586 QRIVEEYGADTARLFMMQAAQPERDFDWSEEGV--RSTNAFLGRLKETVE-----AFAEN 638

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +            D    S     +    +  +    + AL +   LV  + +Y      
Sbjct: 639 EPNGENDAVAGYVD----SEIDATVAVATDEYEALRFNEALRETQGLVRTLRQY------ 688

Query: 434 WELKKTNPDRASTVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       T  +       +  +  LL    P LA ++++ L
Sbjct: 689 ---------AGYTTPHGETYGRGLSAVVRLLAPVTPHLAEELWESL 725


>gi|315497182|ref|YP_004085986.1| leucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315415194|gb|ADU11835.1| leucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 855

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 87/237 (36%), Gaps = 12/237 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + D++ARF R  G +VL   G D  G     AA
Sbjct: 33  DKPKYYVLEMFPYPSGRIHMGHVRNYAMGDLVARFKRARGFNVLHPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  K +   N  + +     L +S D      T +  ++   +  +  +   G +Y
Sbjct: 93  MERGIHPKGWTYDNIASMKAQLQRLGLSIDWTREFATCDPSYYGKQQKWFLDLLKHGLVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+      +F +++ Y D+L+   
Sbjct: 153 RKESQVNWDPVDNTVLANEQVIDGKG----WRSGAVVEKRNLTQWFLKITQYADELVEGL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +   +   +            GL      +  F++  ++  +P  +     D L  
Sbjct: 209 STLDRWPDKVRLMQANWIGRSKGL------KFKFNFAGEVAHEPLEVYTTRPDTLFG 259



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 29/180 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+ P ++ +  GVDA R F++ +    +D  +   G++             
Sbjct: 620 EKMSKSKKNVVAPEDIFDTYGVDAARLFVLSDSPPERDVQWTASGVEGSW---------- 669

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              R  S +  ++D +     A T+      +  V  +  + + E  +    + A+A++ 
Sbjct: 670 ---RFTSRVWAEFDSLPDDDVAATDDASALELRKVAHKAAKAVTEGFEGFRFNGAIAKLY 726

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+             L+ ++  +  T      E +  LA L+    P LA + +  L 
Sbjct: 727 EFVNA------------LRASDVQKTGTAAR--REALTILAGLIAPVTPHLAEEGWARLG 772


>gi|218249873|ref|YP_002375236.1| valyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|218165061|gb|ACK75122.1| valyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 166/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I+E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIIDEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKSLLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFAEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|147669562|ref|YP_001214380.1| isoleucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270510|gb|ABQ17502.1| Isoleucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 1014

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 144/410 (35%), Gaps = 22/410 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGA----DGQYYNAQ 153
            +R H T    W+  S      K   Y    ++RDE    + ++        DG++ +  
Sbjct: 411 NERMHHTYPFCWRCDSPLIYYAKQSWYIRTTAVRDELIKGNQQINWYPEHIKDGRFGDWL 470

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            N + W      ++       +     ++     +   +       ++  L         
Sbjct: 471 ENNIDWAFSRERYWGTPVPIWRCEKCGQTECVGGIDELKAKPNFKGMQEKLDIHRPYADE 530

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPADLHVIGKD 266
           + +              +M  W D+    +    Y   P     +    +PAD      D
Sbjct: 531 WTYDCAKCGGNMKRVTEVMDCWYDSGAMPVAQYHYPFEPESRTIASDGRFPADYICEAVD 590

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++++  + L+         +     +  +GEK+SKS  NVI P  V+++ G DA
Sbjct: 591 QTRGWFYSLHAISTLIFGRPCYQNVICLGHILDERGEKMSKSKNNVIQPATVLDKYGADA 650

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---- 380
           +R++       G    +  + L   V       + N+ S  V+    + D   P+     
Sbjct: 651 VRWYFYTAAPPGNARRFS-EKLVGEVTRQFLLMLWNIYSFFVT--YANIDNFTPSEKYLA 707

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT 439
           G   E D  ILS  ++++ ++ + + N    +A  ++   V  + + Y    +    K  
Sbjct: 708 GEVPELDRWILSELNQLVLDVDKGLDNYDPTQAGRRIEDFVGYLSNWYVRRSRRRFWKSE 767

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           N     +        +  L+ LL  F P +A +++  L +  +    +S+
Sbjct: 768 NDADKLSAYQALYTCLVTLSKLLAPFTPFVAEELYQNLVLLVDQSALESV 817



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ ++  +       N +P I H    +  DV+ R+  + G       G D HG  +   
Sbjct: 36  RDGKRFTLYEGPPTANGRPGIHHVLSRVFKDVIPRYKVMKGYYAPRMGGWDTHGLPVELE 95

Query: 62  AQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +                         +   +V + ++    +A  +D+  D+   T + 
Sbjct: 96  VEKELGFTSKNDIEKYGIAEFNTRCRSSVFKYVSEWNKLTERIAYWVDL--DNAYITMDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ ++     K++ DKG +Y+G     +  R     +  EV +G  
Sbjct: 154 KYIESGWWALKQMWDKGLVYQGHRVTPHCPRCGTSLSSHEVAQGYK 199


>gi|126175313|ref|YP_001051462.1| valyl-tRNA synthetase [Shewanella baltica OS155]
 gi|125998518|gb|ABN62593.1| valyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 958

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 136/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEADVRAKHNIADSMTLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPE 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 HKGGEMELSLADRWIIGLFNQTVKTFDDHMIAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+  +  +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGSEAQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|149201526|ref|ZP_01878500.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144574|gb|EDM32603.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 895

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 29  ETRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKIATGHNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  +G   K +   N  + R     L +S D      T +  ++   + L+    + G +
Sbjct: 89  AMASGGHPKDWTYANIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEHGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G   +        V+  E   +FFR+S + + LL  
Sbjct: 149 YRKNAVVNWDPVDMTVLANEQVIDGKGWRSGAD----VERRELTQWFFRISDHAEDLLEA 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ++   +   +    E       GL+
Sbjct: 205 LDTLDNWPAKVRLMQENWIGKSRGLQ 230



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 30/177 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP  +I + G D  R+F++ +    +D  +   G +              
Sbjct: 667 KMSKSKKNVVDPSTIIAQYGADTARWFVLSDSPPERDVEWTASGAEAA---------HRH 717

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           +SR   +  +    +  +    T  D+++L    + + E+ + + +   + A+A++ +  
Sbjct: 718 LSRVWRIAAE----IAASDAPATPEDDTLLREMHKCIDEVTKGIDSFGFNAAIARLYAFT 773

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +             L K+     +          R LA L+    P LA  I+ +L 
Sbjct: 774 N------------TLAKSQAGTGAKTT-----AARTLAQLMSPMTPHLAEDIWAMLG 813


>gi|294789095|ref|ZP_06754334.1| valine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482836|gb|EFG30524.1| valine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 946

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 126/378 (33%), Gaps = 52/378 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            +          +  +    +     +         +  +       +     +K+  D 
Sbjct: 414 NWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDENGRIYVTHNEEEAQKLSGSVKLTRDE 473

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDILRFH--AIYWPAFLL 280
             ++  W  +     TT G+ D    +++   F P+++ V G +I+ F    +      +
Sbjct: 474 D-VLDTWFSSALVPFTTLGWKDGEPETESMKAFIPSNVLVTGYEIIFFWVARMIMMTTHI 532

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-------------------- 320
              +P            H+G+K+SKS GNVIDP+++I+ +                    
Sbjct: 533 VGKVPFRDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIDLDNLLIKRTTGLRKPETAP 592

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+ +    + G+   +D          +  N I N  +
Sbjct: 593 QVRKATEKLFPEGIPAMGTDALRFTMASYASLGRSVNFDFKR--AEGYRNFCNKIWN-AT 649

Query: 364 RSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             V M  +D D         P  ++  D  I+   ++ ++++ +  +      A   + S
Sbjct: 650 NFVLMNTEDKDCGYGATATEPRGYSFPDMWIVGRLNQTIEQVTQAYETYRFDLAAESLYS 709

Query: 420 LVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            V     D Y +  K  +L+     R     +  + V+     LL   +P +  +++  +
Sbjct: 710 FVWNDYCDWYLELAKV-QLQTGCESRQRATRHTLLCVLEVSLRLLHPIMPFITEELWQTI 768

Query: 478 FVADENRCFQSLDQRLKP 495
               + +   S+     P
Sbjct: 769 APMCDAKTADSIMLAPFP 786



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           H+GHA+   I D LAR++R+ G +  +  GTD  G      
Sbjct: 29  SKSQSFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYYRMKGYNTCWIPGTDHAGIATQIV 88

Query: 62  AQ--------------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +N       +  R +    D + + F  T ++ 
Sbjct: 89  VERQLAAQNISRHDLGREQFLEKVWEWKNISGGTITQQMRRVGCSADWAREYF--TMDET 146

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +    ++ K+ ++G IY+G     +        +D EV              P+
Sbjct: 147 RAEAVTAVFVKLYNQGLIYRGKRLVNWDPVLGTAVSDLEVENVETDGSMWHIRYPL 202


>gi|115398550|ref|XP_001214864.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191747|gb|EAU33447.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 983

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K YI +   YP+   H+GH     I+DVLARF+R+ G DVL   G D  G     AA
Sbjct: 79  DKQKSYILSMFPYPSGTLHMGHLRVYTISDVLARFYRMRGHDVLHPMGWDAFGLPAENAA 138

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    +     +  S+  D  + T     ++  + ++ K+ +KG  Y
Sbjct: 139 IERGIDPAEWTRDNIARMKAQLRSISTSFDWDRELATCAPEFYEHTQRIFLKLYEKGLAY 198

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +  + +FFR++A+++ LL   
Sbjct: 199 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLNLKQWFFRITAFKEALLKDL 255



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 23/188 (12%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP +   + G DA R  ++      +   +D+  +   +R    L
Sbjct: 689 NVSFEKMSKSKHNGVDPTQCALKYGADATRAHVLFSAPVSEVLEWDETKIVGIERWFGRL 748

Query: 355 ANGIGNLVSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QL 409
              +       VS       D   M  +    ++SD   +    R +  +   ++     
Sbjct: 749 WKLVLEAQQTLVSSSYLPDLDTAAMPDSLQGLSDSDADAVLFTHRTISSVTSCIETNPYG 808

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           ++  ++ +  L +             L  + P    T   +    +  L  LL    P L
Sbjct: 809 LNTVISDLTKLTNA------------LASSTP----TSPQIVYLCVSSLLRLLAPVAPAL 852

Query: 470 ANKIFDIL 477
           A++ ++IL
Sbjct: 853 ASECWEIL 860


>gi|304437277|ref|ZP_07397237.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369769|gb|EFM23434.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 823

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y      YP+ + H+GH     I DV+ARF  ++G +VL   G D  G     AA
Sbjct: 30  TKPKYYALEMFPYPSGKLHMGHVRNYSIGDVIARFRTMEGYNVLHPMGFDSFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  N       L ++Y  D  + T  + ++   + L++    KG  Y
Sbjct: 90  IKNKVHPAEWTYANIANMEKQQRALGLAYDWDREVITCREDYYRWTQWLFELFYKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   S  +         +++V  G          + V   +   +FF+++ Y D+LL+  
Sbjct: 150 KKKASVNWCDTCGTVLANEQVEDGK----CWRCKSEVNKKDLAQWFFKITDYADELLADL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           GL
Sbjct: 206 DKLPGWPERVKTMQANWIGRSEGL 229



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 121/394 (30%), Gaps = 38/394 (9%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           TEK         +  +     +             +   N          Q Y     P+
Sbjct: 379 TEKEGILINSGKFTGMEMHAAMQAIMDEAEAQGYGKRRVNYRLRDWLISRQRYWGAPIPI 438

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               + G      A     L    S  +  +     +E     K        +R+T    
Sbjct: 439 INCPKCGEVLVPEAELPVRLPEDVSFEQGAVSPLSSSEHFLRCKCPKCGGDATRET---- 494

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP 276
                D              Y          D  K  +W P D ++ G +    H +Y  
Sbjct: 495 -----DTMDTFICSSWYYYRYTDPKNTERPFDRGKVNYWAPVDQYIGGIEHAILHLLYAR 549

Query: 277 --------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                   A +L  + P    + + G ++  G K+SKSLGNV+ P E+I+  G D  R F
Sbjct: 550 FFTKVLRDAGMLDFDEPFT-NLLTQGMVIKDGAKMSKSLGNVVSPEEIIDRYGADTARLF 608

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           ++      +D  +   G++          +  ++ +    I              +  + 
Sbjct: 609 ILFAAPVDRDLDWSDQGVEGAYR--FLGRVWRILGQFAETIKGA--PASYDAATLSTEET 664

Query: 389 SILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            +  V    ++++ E++    + + A++ ++ LV+ +  +                    
Sbjct: 665 ELRRVLHATIKKVTEDVRDRFMFNTAISSIMELVNALYAF--------------QDKELT 710

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             +  E    L  +L  F P +  +++  LF  +
Sbjct: 711 PGLARETASALVRMLAPFAPHITAELWAQLFGGN 744


>gi|146421716|ref|XP_001486802.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146387923|gb|EDK36081.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 590

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK Y  +   YP+   H+GH     I+DV+AR+ RL G +V+   G D  G     AA
Sbjct: 87  DGEKFYCCSMFPYPSGALHMGHLRVYTISDVVARYMRLKGKNVIHPMGWDAFGLPAENAA 146

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   ++   N    +   D++  D  +D  + T +   +   + ++  +   G  Y
Sbjct: 147 IENGIDPAIWTRDNINKMKAQMDLMLADFDWDREVSTCDPEFYRWTQKIFLLLVKHGLAY 206

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V   ++G+ + +    V+  + E +F  ++ Y   L    
Sbjct: 207 RKKAQINWDPVDQTVLANEQV--DSEGRSWRSGAK-VEKRDLEQWFIGITKYAKDLAKDC 263

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E   ++   ++   +      SG
Sbjct: 264 EVLEDWPEKVKVMQKNWIGESSG 286


>gi|92114464|ref|YP_574392.1| leucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123387387|sp|Q1QV15|SYL_CHRSD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91797554|gb|ABE59693.1| leucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 856

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 8/237 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y  +   YP+ + H+GH     I DV++RF R+ G +VL   G D  G     AA
Sbjct: 31  TREKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRFQRMQGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    R     L  +YD      T +  ++   +  + K+ +KG +Y
Sbjct: 91  IKNRVPPGAWTYDNIDAMRRQLKALGFAYDWNREFATCDVDYYRWEQWFFTKLVEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V +G            V+  E   +F +++ Y D+LL+  
Sbjct: 151 KKMSTVNWDPVDQTVLANEQVIEG----RGWRSGALVERKEIPLWFLKITDYADELLADL 206

Query: 181 E--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +    PE +  ++R     S        ++ S +  +     PD    + YV + A 
Sbjct: 207 DKVDWPEQVKTMQRNWIGKSTGVELSFAVADSSEQLEVYTTRPDTLYGVTYVAVAAG 263



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 26/182 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D +R F++      +   +   G++         G   
Sbjct: 614 EKMSKSKNNGVDPQAMIDRFGADTVRLFMMFAAPPEQSLEWSDSGVE---------GAHR 664

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQ 416
            + R   ++    D   P      A  +  +++       + +  +++  +   + A+A 
Sbjct: 665 FLKRLWKLVADHLDAGTPAALDADALNDDQKTLRRKTHETIAKASDDIGRRTTFNTAIAA 724

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ LV+ + R F+   P  L             VT E +    ++L   VP   + ++D 
Sbjct: 725 VMELVNAIGR-FEDTSPQGLA------------VTREALEACVLVLAPIVPHACHALWDA 771

Query: 477 LF 478
           L 
Sbjct: 772 LG 773


>gi|309379125|emb|CBX22256.1| valyl-tRNA synthetase [Neisseria lactamica Y92-1009]
          Length = 945

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 130/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    +  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETEELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ + ++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIGQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCTGRRRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPFITEELWQ 764



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|226939053|ref|YP_002794124.1| leucyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782503|sp|C1DA02|SYL_LARHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226713977|gb|ACO73115.1| Syl [Laribacter hongkongensis HLHK9]
          Length = 866

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y  +   YP+ + H+GH     I DVL+R+  L G +VL   G D  G     AA
Sbjct: 31  SRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYMALKGYNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I ++  + T +  ++   + L+ ++ +KG IY
Sbjct: 91  LKNQVAPAAWTYSNIEYMKTQLKSLGFAIDWEREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   Y+F ++ Y D+LL+  
Sbjct: 151 RKNGVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYFGITQYADELLADL 206

Query: 181 ESHPEFILPIERRNEVI 197
           ++          +   I
Sbjct: 207 DTLDWPPQVATMQRNWI 223



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 45/248 (18%)

Query: 240 TTTGYLDNPDGSKAKFWPADLHVI----GKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
             T Y D  +GSK    PAD+ +     GK I   H         +  LP    V   G 
Sbjct: 581 CETFYRDLDNGSKEWITPADVVIERDGKGKIIAATHK--------ADGLP----VVVGGI 628

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                EK+SKS  N +DP  +IE+ G D  R F++      +   +   G++        
Sbjct: 629 -----EKMSKSKNNGVDPQALIEQYGADTARLFMMFAAPPSQSLEWSDAGVEGAYR--FL 681

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRAL 414
             +  +VS  V+  + +        G  T  ++++       +Q++ ++    Q  + A+
Sbjct: 682 KRLYKIVSEYVAGGVAE----RFVAGELTADEKALRLKLHTTIQKVSDDFGVRQQFNTAI 737

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A V+ L++  DR            T   RA     V  EV+  + +LL   VP +   ++
Sbjct: 738 AAVMELLNLFDR------------TEASRA-----VRQEVLESVVVLLSPIVPHICETLW 780

Query: 475 DILFVADE 482
             L    E
Sbjct: 781 SALKPGSE 788


>gi|216264415|ref|ZP_03436407.1| valyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980888|gb|EEC21695.1| valyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKSLLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFAEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|220921032|ref|YP_002496333.1| leucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219945638|gb|ACL56030.1| leucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 868

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 37  RPTYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGLPAENAAM 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N    R     + +S D    I T +  ++   + ++      G + +
Sbjct: 97  ERKINPRDWTYANIATMRSQLQAMGLSLDWSREIATCDPSYYKHQQRMFLDFLKAGLVAR 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ Y   L    +
Sbjct: 157 RTAKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDYAQDLNDRLD 212

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
               +   +    +       GL+  
Sbjct: 213 GLERWPEKVRLMQKNWIGRSEGLEVR 238



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 23/177 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D  R+F++ +    +D  + +DG++    +     +  
Sbjct: 632 EKMSKSKRNVVDPDDIIASYGADTARWFMLSDSPPERDVIWTEDGVQGA--SRFVQRVWR 689

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+   +      D           +D ++     + L  + E+++    +R +A +  L
Sbjct: 690 LVNEIAARAETSGDAT---------ADLALRKAAHKALAAVGEDIERLRFNRCVAHIYEL 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +             L+     +A+      +E    L  LL   +P LA   + +L
Sbjct: 741 AN------------TLQDALAGQATLSRPALLEAGTILVQLLAPMMPHLAESAWAVL 785


>gi|110635538|ref|YP_675746.1| leucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|122965612|sp|Q11DE4|SYL_MESSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110286522|gb|ABG64581.1| leucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 871

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 78/208 (37%), Gaps = 6/208 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 32  GRPTYYVLEMFPYPSGRIHIGHTRNYTMGDVVARYKRAKGYNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K +   N    R    ++ +S D      T +  ++   ++L+     KG + 
Sbjct: 92  IQNKIHPKEWTYDNIATMRSQLKMMGLSLDWAREFATCDVDYYHRQQMLFIDFYKKGLVR 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   ++    +++V  G            V+  E   +FF+++ Y + LLS  
Sbjct: 152 RKTSKVNWDPVEQTVLANEQVIDG----RGWRSGALVEQRELAQWFFKITDYAEDLLSAI 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS 208
           +   ++   +            GL    
Sbjct: 208 DGLDDWPEKVRLMQRNWIGRSEGLSIRW 235



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 125/391 (31%), Gaps = 84/391 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G            L           P++R       VK 
Sbjct: 434 WGVSRQRYWGCPIPMIHCDTCGVVPVPKEELPVKLPDDVDFDRPGNPLDRHPTW-RHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD 259
                   R+T              M  ++D+   +   T    +    K    ++ P D
Sbjct: 493 PQCGADARRET------------DTMDTFVDSSWYFARFTSPHADSPVEKDVVNRWLPVD 540

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKG------- 300
            ++ G +    H +Y   F  +                  + +  H     +        
Sbjct: 541 QYIGGIEHAILHLLYSRFFTRAMRDTGHLDLAEPFKGLFTQGMVVHETYRAEDGRWLTPA 600

Query: 301 ---------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                      EK+SKS  N + P ++ E  G D  R+F++ + 
Sbjct: 601 EVRIEGSAGERRAFEIATGKEVAIGPLEKMSKSKKNTVSPEDITESFGADTARWFMLSDS 660

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILS 392
              +D  +  DG         A G    V R+  +I +    +   TP A  + D + +S
Sbjct: 661 PPERDVEWTDDG---------AAGAHRFVQRAWRLITEAAPAIGDITPKAARDGDAAAIS 711

Query: 393 V-CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE-LKKTNPDRASTVLYV 450
               + L+ + E+++    +RA+A++  LV+      D Q P+  L K + +  +     
Sbjct: 712 KPAHKALKAVGEDIERLAFNRAIARIHELVN------DLQGPFAGLDKADEETRAAAR-- 763

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             E    L  L+  F+P LA + +  +   D
Sbjct: 764 --EATEILIHLIAPFMPHLAEECWAAIGGKD 792


>gi|229846754|ref|ZP_04466861.1| valyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810243|gb|EEP45962.1| valyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 954

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 139/427 (32%), Gaps = 90/427 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +      T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFFTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSQG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGFMLHK 501
            GF L  
Sbjct: 790 NGFDLEA 796



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|153001634|ref|YP_001367315.1| valyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151366252|gb|ABS09252.1| valyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 958

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 135/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEAAVRAKHNIADSMTLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPE 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 HKGGEMELSLADRWIIGLFNQTVKTFDDHMTAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+     +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGTEAQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|68250091|ref|YP_249203.1| valyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335485|sp|Q4QKA4|SYV_HAEI8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68058290|gb|AAX88543.1| valyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 954

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 76/427 (17%), Positives = 142/427 (33%), Gaps = 90/427 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFADGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSEGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGFMLHK 501
            GF L  
Sbjct: 790 NGFDLEA 796



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|224533275|ref|ZP_03673869.1| valyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225548893|ref|ZP_03769870.1| valyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224513440|gb|EEF83797.1| valyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225370496|gb|EEG99932.1| valyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNSENIDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFSEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|224532587|ref|ZP_03673209.1| valine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512443|gb|EEF82822.1| valine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 875

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFTEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|118475500|ref|YP_892134.1| valyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414726|gb|ABK83146.1| valyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 873

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 72/403 (17%), Positives = 138/403 (34%), Gaps = 63/403 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + + F  S   ++ +           P    N   +     LKD  
Sbjct: 344 YCYRCKNVVEPYISKQW-FVKSDIANEAIQNVNDGGAEFFPSHWIN-SFNAWMRELKDWC 401

Query: 209 LSRKTFDWGIKIP-----------------------------DDPQYIMYVWIDALTNYL 239
           +SR+   WG +IP                              DP  ++  W  +    +
Sbjct: 402 ISRQ-LWWGHQIPVFYCECGHEWADENEKPIKCPKCGGNKFTQDPD-VLDTWFSSGLWPI 459

Query: 240 TTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
           +T G+ +          +   ++F+P  + + G DIL F    + +        LP    
Sbjct: 460 STLGWGNADELKNEKWFERDLSEFYPNTMLITGFDILFFWVARMMFQCGNAVGELPFKDI 519

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                     G+K+SKS GNVIDP+  I+E   D LR+ L      G+D    ++ +   
Sbjct: 520 YLHALVKDKDGKKMSKSSGNVIDPLTKIDEYSADILRFTLTLLCVQGRDIRLSEEKMV-- 577

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQN 407
               L     N +  +   +L +             T+    +LS     +  +R N+  
Sbjct: 578 ----LVRNFTNKLYNASKFLLLNAGNFPDFDENSIKTDLGRYMLSRFKSCVNLVRSNLDA 633

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A   +   +       D    W ++ +  D++S +      + ++   LL  F+P
Sbjct: 634 YRFNDAANDIYKFLW------DEFCDWGIELSKVDKSSVIE--LGMIFKESMKLLSPFMP 685

Query: 468 KLANKIFDIL-FVADENRCFQSLDQRLK---PGFMLHKTFDPI 506
            ++  ++  L     EN     + +  K   P   + +T+  +
Sbjct: 686 FISEYLYHELSGTNLENSGSIMVMKYPKISTPDQKIVETWSAV 728



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 18/175 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +K  I           HIGHA    + D++ R+ R+DG   L+  G D  G     
Sbjct: 33  LEKDKKFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKALWQPGLDHAGIATQN 92

Query: 61  AAQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
             +                     T  + +++  +       L I  ++     T +   
Sbjct: 93  VVEKQLLANGVTKEQIGREEFLKKTWEWKEKSGGSIVHQMRRLGITPAWSRERFTMDAGL 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R  +  + +KG I +G Y   +   D A  + +  +K   G+ Y+ ++  V
Sbjct: 153 KNAVRKAFVNLYNKGLIVRGNYMVNWCTHDGALSDVEVEHKANKGKLYHIKYPIV 207


>gi|329113498|ref|ZP_08242279.1| Valyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697323|gb|EGE48983.1| Valyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 920

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 116/339 (34%), Gaps = 10/339 (2%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E  FF             +      +P     +   FV     D           +++  
Sbjct: 427 ENTFFAWMRDIQPWCISRQLWWGHRIPAWYGPDEHVFVAHDEADAQAQANAHYGKVEVLR 486

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
               ++  W  +     +T G+ D      A+++P D+ V G DI+ F    +       
Sbjct: 487 RDDDVLDTWFSSALWPFSTLGWPDKTP-ELARYYPTDVLVTGFDIIFFWVARMMMMGQHF 545

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             ++P              G+K+SKS GN IDP+E+I++ G DA+R+ +      G+D  
Sbjct: 546 MHDVPFRNIFIHGLVRDEHGQKMSKSKGNGIDPLELIDQYGADAMRFTICALTGIGRDVK 605

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
             +  ++          + N         +K  +G  P     +     I++  +  + E
Sbjct: 606 LGRKRVED--YRAFITKLWNAARFCEMNGVKPVEGFDPA-TVKSPLGRWIIAEAAAAITE 662

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
               + +             V     D + +  KP     T+   A+ +  V   V+  +
Sbjct: 663 ATRALDSYRFDEYALSCYRFVWNRFCDWFLEFAKP-VFNSTDEAEAAEIRAVAAYVLGVI 721

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPG 496
             LLQ  +P + + ++      +E      S  + + P 
Sbjct: 722 LRLLQPVIPFVTDTLWHSFGYGEEGSLISASWPEPVVPA 760



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA  M + D L R+ R+ G D L+  GTD  G      
Sbjct: 54  SGKKPFTIMIPPPNVTGTLHMGHALTMTLQDTLIRWKRMQGFDTLWQPGTDHAGIATQMV 113

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    T                   + +Q+          L  S D      T ++   
Sbjct: 114 VERTLATEGKTRQEMGRDAFIERVWEWKEQSGGGITKQLRRLGSSLDWPRERFTMDEGLS 173

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + ++G IY+      +     +  +D EV              PV+
Sbjct: 174 RAVREVFVTLYNEGLIYRDRRLVNWDPVFRSAISDLEVESKDVAGNLWYIRYPVE 228


>gi|167837875|ref|ZP_02464758.1| leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 864

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    +     +   I +   + T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAQWTYENIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGIVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYMRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D  R F +      +   +   G+              
Sbjct: 623 EKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFG 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R    +   +D          E+D ++      VL++   + Q    +  ++  + +
Sbjct: 683 FANREALAVRASFD-----AAQLAEADRTLRREIHGVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +                         V  E    L  +L   VP +  +++  L  A
Sbjct: 738 LNAI----------------EGAKGATPAVQRETYGVLLRVLYPVVPHVTFELWKALGYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|282891964|ref|ZP_06300443.1| hypothetical protein pah_c200o137 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498224|gb|EFB40564.1| hypothetical protein pah_c200o137 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 957

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 80/400 (20%), Positives = 135/400 (33%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F R+S +  KL    ES    ++P    N    ++   L+D  +SR+   W
Sbjct: 362 IEPYISKQWFVRMSEFGKKLRHIIESKQVTLIPKNWENTYFHWID-NLRDWCISRQ-LWW 419

Query: 217 GIKI------------------------------PDDPQYIMYVWIDALTNYLTTTGYLD 246
           G +I                                    ++  W  +      T G+ +
Sbjct: 420 GHRIPIWTNKNDPEKRICYDGEGVPPEVEANPDDWTQDDDVLDTWFSSSLWPFATLGWPE 479

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI-------- 296
           N    K KF+P  + + G DIL F    + +         P P+                
Sbjct: 480 NTPELK-KFYPNSVLITGHDILFFWVARMIFMGDYAMGEPPFPETFLHGLIYGKSYWRDA 538

Query: 297 --------------------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                      +K EK+SKS GN+IDP+E+IE+ G DA+R  L 
Sbjct: 539 PGGGIAYLSEKERMEYDLGKPLPSDVHYKWEKMSKSKGNIIDPLEIIEQYGTDAMRMALC 598

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------- 382
                 ++   D+   +   N   AN I N   R V M LK  +                
Sbjct: 599 VSATQAREIDLDRRRFEDLKN--FANKIWNGA-RFVLMNLKGNEHNPALTAQEFSQGVNF 655

Query: 383 --FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
                 D  ILSV +RV++ + + +      +A  +            Y +  KP  + K
Sbjct: 656 SLLALEDRWILSVLNRVIKSVEQKLTTYQFDQAAQEAYDFFWRDFCSYYLEIAKPVLMGK 715

Query: 439 TN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  P   S    +   ++ Q   L+    P +  ++F  L
Sbjct: 716 SGLPGERSNKQKLLAIILCQAIRLMHPMAPFITEELFHAL 755



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 23/178 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +    I           H+GHA    + D+L R+ R+ G + L+  GTD  G     
Sbjct: 41  LSPKPGYCIVIPPPNVTGVLHMGHALVNTLQDILIRWKRMQGFETLWIPGTDHAGIATQT 100

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTE 99
             +   + T                 + + D++ +        L  S D     F  T +
Sbjct: 101 VVERNLMKTEGKRRVDYSREDFLQRVQNWKDESEKVILHQLKSLGCSCDWSRLRF--TMD 158

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++   + ++KK+ D   IY+G Y   +    +    DDEV       +      P+
Sbjct: 159 AGNNAAVKKMFKKLYDANLIYQGDYLVNWDPVTQTALADDEVEYEEKQSFLWHFKYPL 216


>gi|229815165|ref|ZP_04445502.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
 gi|229809395|gb|EEP45160.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
          Length = 862

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     A
Sbjct: 45  STKPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGYDVLHPIGFDAFGLPAENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N          +  SY  D  ++T    ++   + +++K+ ++G +
Sbjct: 105 AIKHNTQAAAWTYRNMDQALATMKRMGFSYDMDRLVKTCSPDYYRWGQWIFEKLWERGLV 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + E    +++V +G          + V+  + E ++ +++AY  +LL  
Sbjct: 165 YRKKNPVNWCPKCETVLANEQVTEG----RCWRCDSEVEKRDLEQWYIKITAYAQELLDD 220

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E  P +   +++          G
Sbjct: 221 LEKLPGWPERVKQMQANWIGRSEG 244



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 85/264 (32%), Gaps = 26/264 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y              A  + P D ++ G +    H +Y   F   
Sbjct: 531 DTMDTFTCSSWYYLRYTDPHNTELPFSREAANRFMPVDNYIGGIEHAILHLLYSRFFTKA 590

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L  + P    +         G+ +SKS GNV+ P  VIE  G D +R  ++   
Sbjct: 591 LRDMGLLDVDEPFTNLLCQGMVKDENGDTMSKSKGNVVPPSSVIEPFGADTMRLAILFIA 650

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILS 392
              KD  +D   ++       AN       R V  + +   D      GA ++    +  
Sbjct: 651 PPEKDFDWDPKAVEG------ANRFIKRAWRIVWQLAETAGDAASLDKGALSKPALELYR 704

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              R L +  E+      + A++ ++ LV+    Y +A     +     D A T L    
Sbjct: 705 ERHRTLAKCTEDFDRGQFNTAISAMMELVNAASAYINA-----VPAAERDAALTAL---- 755

Query: 453 EVIRQLAILLQAFVPKLANKIFDI 476
            V   +   L    P    +++  
Sbjct: 756 -VACDIVSALAPICPFACEELWHA 778


>gi|189501861|ref|YP_001957578.1| isoleucyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497302|gb|ACE05849.1| hypothetical protein Aasi_0436 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 1108

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 11/286 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K       ++ VW D+         Y      +  + +PAD    G D     F  ++  
Sbjct: 565 KEMHRTTDLIDVWFDSGAMPYAQWHYPFENKETFQQSFPADFIAEGVDQTRGWFFTLHAI 624

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A +L  ++     V +   +   G K+SK LGN IDP +++++ G DALR++++      
Sbjct: 625 AVMLFDSVAFKNVVSNGLILDKIGNKMSKRLGNSIDPFQIMQQHGPDALRWYMISNANPW 684

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSV 393
            +  +D +GL +      +         ++   L D+     +        E D  ILS 
Sbjct: 685 DNLKFDTEGLVEVTRKFFSTLQNTYSFFALYANLDDFFFNKQSNIPLKGRPEIDRWILSR 744

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVLY 449
              ++Q +   +      RA   +   V     + Y   + ++ W+ ++T    A+    
Sbjct: 745 LHSLIQFVTTELDAYEPTRACRAIQDFVVDDLSNWYVRLNRKRFWKSEQTQDKTAA--YQ 802

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                +  +  L     P    +++  L +  +     S+     P
Sbjct: 803 TLYTCLTTVVQLASPIAPFYTERMYKDLQLVQQEDKTSSIHLSDWP 848



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N +P I H     + D+  R+  L G  V   +G D HG  +   
Sbjct: 37  EGKPSFTFYEGPPSANGEPGIHHVLSRALKDLFCRYKTLQGYQVKRKSGWDTHGLPVELQ 96

Query: 62  AQNAGVTTKVF------VDQNSRNFRDMADVLDISYDDFIR-------------TTEKRH 102
            + +   TK        +++ + + R         ++                 T ++++
Sbjct: 97  VEKSLGITKEEIGKRISIEEYNAHCRQTVMRYTDQWEKLTTELGYWLDTENPYITYDRQY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   L K++  KG +YKG     YS       +  E+ +   
Sbjct: 157 IESVWYLLKQLYSKGLLYKGYSIQPYSPAAGTGLSSHELNQPGC 200


>gi|160876370|ref|YP_001555686.1| valyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160861892|gb|ABX50426.1| valyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268560|gb|ADT95413.1| valyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 958

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 135/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEADVRAKHNIADSMTLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPE 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 HKGGEMELSLADRWIIGLFNQTVKTFDDHMTAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+     +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGTEAQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|31323176|gb|AAP43521.1| ValS [Escherichia coli B]
          Length = 801

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R        +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N D  +    P  + V G DI+ F         +           +P      +      
Sbjct: 492 NTDALRQFH-PTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDD 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++++ +                                     G
Sbjct: 551 EGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  D       
Sbjct: 611 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQDCGFNGGE 667

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  IL+  ++ ++  RE + +     A   +         D Y +  KP  +  
Sbjct: 668 MTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKP-VMNG 726

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                     +  V V+  L  L    +P +   I+  + V
Sbjct: 727 GTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 767



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   I           H+GHA++  I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMV 89

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       +R  R + + +D   + F  T ++
Sbjct: 90  VERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++  +  IY+G     +  +     +D EV              P+
Sbjct: 148 DLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPL 204


>gi|304410152|ref|ZP_07391771.1| valyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302137|ref|ZP_07581895.1| valyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351561|gb|EFM15960.1| valyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914175|gb|EFN44596.1| valyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 958

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 135/403 (33%), Gaps = 90/403 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++  ++      +   E+     +P +  N   S+++  ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRD-IQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEADVRAKHNIADSITLRQDEDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEVGV------------------------------------ 322
            G K+SKS GNV+DP+++I+ +G+                                    
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHG 610

Query: 323 -DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L         N + N  SR V M  +D D    +P 
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEDQDCGPGSPE 667

Query: 382 ------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP 433
                   + +D  I+ + ++ ++   ++M       A   +         D Y +  KP
Sbjct: 668 HKGGEMELSLADRWIIGLFNQTVKTFDDHMTAYRFDLAANTLYEFTWNQFCDWYLELTKP 727

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L+     +     +  V V+  +  L+   +P +   I+  
Sbjct: 728 -VLQNGTAAQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQR 769



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKNRHDLGRDAFMDKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ ++ +   IY+G     +  +     +D EV       +      P+   E 
Sbjct: 150 SKAVQEVFVRLYEDELIYRGKRLVNWDPKLHTAISDLEVESKEKQGHMWHLRYPLADGEL 209

Query: 163 E 163
            
Sbjct: 210 T 210


>gi|118150802|ref|NP_001071314.1| leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
 gi|117306241|gb|AAI26599.1| Leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 616

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N R+ R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIRHMRKQLDQLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LAGLPEWYGIKGMQAHWIGDC 276


>gi|58038885|ref|YP_190849.1| leucyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819158|sp|Q5FTV3|SYL_GLUOX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58001299|gb|AAW60193.1| Leucyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 865

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 81/237 (34%), Gaps = 7/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  V+   G D  G     AA
Sbjct: 37  DRPKYYVLEMFPYPSGQLHVGHVRNYTLGDVVARYKRARGFAVMHPMGWDAFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   V    +   N    R     L  S  +D  I T    ++   + L+  +   G + 
Sbjct: 97  RERNVHPGKWTMDNIATMRGTLQRLGFSLDWDREIATCLPEYYGKQQKLFTDMLGAGLVE 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V  G            ++  +   +F +++ +   LL   
Sbjct: 157 RRDSLVNWDPVDETVLANEQVVDG----RGWRSGALIEKKKLSQWFLKITKFAQPLLDDL 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++   +   +    E       G   +  +      G     D   +     D L  
Sbjct: 213 KTLDRWPERVRTMQERWIGRSEG-ARVRFALHQPPAGYDEDLDSVEVFTTRPDTLFG 268



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 109/357 (30%), Gaps = 48/357 (13%)

Query: 141 VYKGADGQYY-NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           ++    G      +  PV   E+  +    +         + + P    P  R  +    
Sbjct: 451 IHCDTCGPVPVPDEQLPVILPEDVTFDRPGNPLDHHPTWKHVNCPHCGKPAVRETDTFDT 510

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                  +  S     +     + P            +               A+F+   
Sbjct: 511 F------VDSSWYFARFTSPHAETPTVPAAANGWLPVDQYIGGIEHAILHLLYARFFTRA 564

Query: 260 LHVIGK-DILRFHAIYWP-------AFLLSANLPLPKKV-----------FSHGFILHKG 300
           +H  G  D+    A  +        ++   +    P++V                 + + 
Sbjct: 565 MHETGHLDVDEPFAGLFTQGMVTHESYRDDSGWLYPEEVERQGDQVVRRETGTPVQVGRS 624

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P+++IE  G D  R+F++ +    +D  +   G      A     +  
Sbjct: 625 EKMSKSKRNTVSPVDIIERYGADTARWFVLSDSPPERDMEWTAAG--VAAAARFGQRLHR 682

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+   +    D         A   + + +  V  R +  + E ++    + A+A++  L
Sbjct: 683 LVASVAARDAAD--------SAHGATGDDLRRVTHRTIAAVGEALEAFTPNVAVARLHEL 734

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            S             L        + +     E  R L +L    +P LA  +  +L
Sbjct: 735 TSA------------LADAERIEGAGIAAARREAARVLCLLTAPMMPHLAEDMMAVL 779


>gi|325266762|ref|ZP_08133435.1| leucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981764|gb|EGC17403.1| leucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 876

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 88/230 (38%), Gaps = 7/230 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV +RF ++ G +VL   G D  G     AA
Sbjct: 31  SKPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKMQGFNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N  V    +  +N    R     L  + D    I T    ++   ++L+ K+ +KG +Y
Sbjct: 91  INHQVAPSKWTYENIAYMRKQLQSLGFALDWEREIATCRPEYYRWEQLLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+F+++ Y ++LL+  
Sbjct: 151 KKLGTVNWDPIDQTVLANEQVIDG----RGWRSGALVEKREIPMYYFKITDYAEQLLADL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
               ++   ++           G+            G+         +Y 
Sbjct: 207 -DGLDWPEQVKTMQRNWIGKSRGMTVRFQVAADSREGLPENHCEFVQVYT 255



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 125/361 (34%), Gaps = 37/361 (10%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR-LSAYQDKLLSYYESHPEFILPIERR 193
           +Y       G  G           ++E   Y FR +S   D  +   E+   +    +  
Sbjct: 484 FYETKCPKCG--GAAKRETDTMDTFVESSWYQFRYMSPRDDAHMVAPEAAAYWGQADQYI 541

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
             +   +   L     ++   D GI    +P   +      L      T Y ++ DG K 
Sbjct: 542 GGIEHAILHLLYARFFTKLMNDEGIVSMREPFKQLLTQGMVL----AATYYRESADGKKT 597

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            F PA++ V   D             +SA L    ++   G +    EK+SKS  N +DP
Sbjct: 598 WFNPAEVRVQTDD---------KGRPVSAVLEADGQLVVIGGV----EKMSKSKNNGVDP 644

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++I+  G D  R F++      +   +   G++          +   V   V       
Sbjct: 645 QQIIDAYGADTARLFMMFASPPEQSLEWSDAGVEGAHR--FLRRLWRTVYEFVQNGGSGV 702

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQK 432
                +    + S + +       + ++ ++   +   + A+A V+ L   +++Y D   
Sbjct: 703 SKFSGSQETLSGSLKDLRFKLHSTIAKVTDDYDRRQQFNTAIAAVMEL---LNQY-DKT- 757

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
                 T+ +    V     EV+  + +LL   VP +   ++  L       + + ++D 
Sbjct: 758 -----DTSGELGQAV---AREVLEAVVLLLSPIVPHICETLWGELAGGNLWQQSWPAVDN 809

Query: 492 R 492
            
Sbjct: 810 A 810


>gi|164687829|ref|ZP_02211857.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
 gi|164603104|gb|EDQ96569.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
          Length = 806

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +   Y      YP+ + H+GH     I DV+ARF +++G +VL   G D  G     A
Sbjct: 30  TSKPLYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N  + ++   +L +SYD    + T+   ++   + ++ K  + G  
Sbjct: 90  AIKHGIHPAKWTYENIDDMKNQLKLLGLSYDWERELATSNPDYYKFTQEIFLKFLEAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    E    +++V  G            V   E E ++F+ + + ++LL+ 
Sbjct: 150 YKKKSFVNWCPSCETVLANEQVVGGQ----CERCDAVVVKKELEQWYFKTTEFAEELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLEGWPEKVKTMQRNWIGKSHG 229



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/425 (15%), Positives = 138/425 (32%), Gaps = 49/425 (11%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           ++ A    I   D I   ++         +  +       K         R +   N   
Sbjct: 349 KEFATKYGIEIIDVI---DEDGKMINSEEFNGMDATEAQDKITEKLAKEGRGKKTVNYRL 405

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                  Q Y     PV + E+ G           LL                ++     
Sbjct: 406 RDWLLSRQRYWGVPIPVVYCEDCGIVPVDKKDLPVLLPTDVEFTGKGESPLTTSKTFINT 465

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
                    +R           D              Y+         D      W P D
Sbjct: 466 TCPKCGKHATRD---------VDTMDTFVDSSWYFLRYIDNKNQEAMFDSEVVNKWMPVD 516

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F        ++  + P  K + + G +L  G K+SKS GN +
Sbjct: 517 QYIGGVEHAIMHLLYARFFVKALKKVGMVDFDEPF-KNLLTQGMVLMDGSKMSKSKGNTV 575

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-- 369
            P+E+I++ G D  R F++      +D  + + G++         G    ++R   ++  
Sbjct: 576 SPLEIIDKYGADTARLFVLFAAPPERDLDWSEQGVE---------GCFRFLNRVYRLVDE 626

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYF 428
           LKD           T+ D+++       L+++ +++      + A+A ++ L++E+ +Y 
Sbjct: 627 LKDIAKSDAKVNVATKEDKAMRFTIHSTLKKVTDDLSFKFGFNTAIASLMELINEMYKY- 685

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCF 486
                    K    R   ++    E I  +  +L  F P +  +++ ++       +  +
Sbjct: 686 ---------KELDTRNDGIIK---EGIETIVTILAPFTPHVGEELWQMIGKEGSIFDISW 733

Query: 487 QSLDQ 491
              D+
Sbjct: 734 PEFDE 738


>gi|158334219|ref|YP_001515391.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082976|sp|B0C1R1|SYL_ACAM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158304460|gb|ABW26077.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 855

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  TSKPKFYALSMFPYPSGSLHVGHTRNYVITDVIARLKRMQGYRVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N    +   + L +S D    I T    ++   + ++ +  D G  
Sbjct: 90  AIARGIHPAEWTYANMAQMKKQLEPLGLSIDWSREIATCSPDYYRWTQWIFLQFLDMGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    +G+ + +    V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPVDQTVLANEQV--DNEGRSWRSGAK-VERKLLRQWFLKITDYAEELLTD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 207 LDKLTGWPERVKTMQANWIGKSVG 230



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 107/317 (33%), Gaps = 64/317 (20%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y          D +K   W P D +V G +    H +Y   
Sbjct: 490 KRETDTMDTFIDSSWYFLRYPDAKNDKAVFDSAKTNDWLPVDQYVGGIEHAILHLLYSRF 549

Query: 278 FL--------LSANLPL--------------------------------PKKVFSHGFIL 297
           F         L+ + P                                 PK   +   + 
Sbjct: 550 FTKVMRDRKLLNFDEPFKKLLTQGMVQALTYKNPETGQYIAPINVDADDPKDPETGAPLE 609

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              EK+SKS  N + P EV  + G D  R F + +    KD  ++   ++ +      N 
Sbjct: 610 AFYEKMSKSKYNGVPPEEVTNKYGADTARLFTLFKAPPEKDLEWEGADVEGQFR--FLNR 667

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
           +  LVS   +                +++++ +       ++E  E++  +   + A+++
Sbjct: 668 VWRLVSEHAAQAKGK--KAKVNKAKLSKTEKELRRSIHIAIKETSEDLDGDYQFNTAVSE 725

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L + +               + ++AS V     E +  L +LL  F P ++ ++++ 
Sbjct: 726 LMKLSNALS-------------DSKEKASPVY---AEGVETLLLLLTPFAPHISEELWEN 769

Query: 477 LFVADE--NRCFQSLDQ 491
           L  ++    + +  +D+
Sbjct: 770 LGHSESILGQTWPQVDE 786


>gi|218132723|ref|ZP_03461527.1| hypothetical protein BACPEC_00584 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992449|gb|EEC58452.1| hypothetical protein BACPEC_00584 [Bacteroides pectinophilus ATCC
           43243]
          Length = 1053

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/459 (13%), Positives = 137/459 (29%), Gaps = 14/459 (3%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    D  G+  A+          VFV +         D     +D     
Sbjct: 343 KVGKKYDLPFVQFVDGKGELTAETPYAG-----VFVKKADPMVLADLDKEGKLFDAPKFE 397

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +      C       + +    K        +R+    N      G  G++     N  
Sbjct: 398 HDYPFCWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTINWIPESIG-KGRFGAWLENVQ 456

Query: 158 QWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W      ++      ++ +    +       L     N             +++ K   
Sbjct: 457 DWGISRNRYWGTPLNVWECECGCQHSIGSIAELKEMSDNCPDDIELHRPYIDAVTIKCPK 516

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G ++   P+ ++  W D+ +       Y         + +PA       D     F+++
Sbjct: 517 CGRQMHRVPE-VIDCWFDSGSMPFAQHHYPFENKDLFEQQFPAKFISEAVDQTRGWFYSL 575

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              + LL    P    +         G+K+SKS GN +DP + +++ G DA+R++     
Sbjct: 576 LAISTLLFNKAPYENVIVLGHVQDADGQKMSKSKGNAVDPFDALQKHGADAIRWYFYENS 635

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESIL 391
           A      +    + +     +           +   + ++D              D+ IL
Sbjct: 636 APWLPNRFHDKAVTEGQRKFMGTIWNTYAFFVLYANIDNFDATQYKLEYDKLPVMDKWIL 695

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYV 450
           S  + +++ +  N+ +  I      +   V E+ + Y    +     K            
Sbjct: 696 SKLNTLIKTVDNNLNDYKITETARALEDFVDELSNWYVRRSRERFWAKGMEQDKINAYMT 755

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               +  LA      +P +   I+  L  + +    +S+
Sbjct: 756 LYTCLVTLAKCAAPMIPFMTEDIYQNLVRSIDKTAPESI 794



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 37  KKGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 96

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D ++ +      D+   T +   
Sbjct: 97  VEKMLGLDGKEQIEEYGLEPFIKHCKESVWKYKGMWEDFSNTVGFWADMDNPYVTYDNNF 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 157 IESEWWALKEIWNKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYK 200


>gi|253680785|ref|ZP_04861588.1| isoleucine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562634|gb|EES92080.1| isoleucine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 1038

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/288 (20%), Positives = 111/288 (38%), Gaps = 10/288 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K       ++  W D+ +       Y         K +PA       D     F+++   
Sbjct: 505 KEMTRTNEVIDCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGWFYSLLAI 564

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  L         +     +  KG K+SKS GNV+DP +V+E  G DA R+      A  
Sbjct: 565 STALFDTNSYENCIVLGHVLDKKGLKMSKSKGNVVDPFDVLENEGADATRWHFYTASAPW 624

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGMIPTPGAFTESDESILSVC 394
               + +D +K+       + + N+ S  V  + I K          +    D+ I+S  
Sbjct: 625 LPTRFSEDDVKETQ-RKFLSTLWNVYSFYVLYAEIDKFNPTEYKDFVSENVMDKWIISKL 683

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVT 451
           + +++ I EN+ N  I  A   +   V E+ + Y   +  + W  + T+    +      
Sbjct: 684 NTLIKSIGENLDNYKITEAALTLEDFVDELSNWYVRRNRSRFWSTELTDDKIGA--YTTL 741

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            +V+  L  +   FVP ++ +I+  L V  +    +S+     P + L
Sbjct: 742 HKVLTTLVKVAAPFVPFMSEEIYQNLVVNLDKEAVESVHLCTWPQYNL 789



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHVLTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++DM++ L      D+   T    +
Sbjct: 96  IEKKLGISGKPQIEEYGVEKFVTECKDSVFKYTSLWKDMSEKLGFWVDMDNPYVTYHNTY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K + +K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKTMWEKDLLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|320105765|ref|YP_004181355.1| valyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924286|gb|ADV81361.1| valyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 932

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 128/385 (33%), Gaps = 66/385 (17%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++    DK +   E       P         +++  + D  +SR+   W
Sbjct: 377 IEPRLSKQWFIKIQPLADKAIQAVEEGHVTFTPAMYAKTYFEWMR-NIHDWCISRQ-LWW 434

Query: 217 GIKIP----------------------------DDPQYIMYVWIDALTNYLTTTGYLDNP 248
           G +IP                                 ++  W  +     T  G+    
Sbjct: 435 GHRIPAWHCGACGAMTVAREAPSACGTCSSADLTQETDVLDTWFSSGLLPFTVFGWPKQT 494

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK-------------KVFSH 293
                 F+P DL V G DIL F    +         ++P+P              +V+ H
Sbjct: 495 ADLND-FYPTDLLVTGFDILFFWVARMIMLGTHFMLDVPMPDGLARTLKDAVPFREVYIH 553

Query: 294 GFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
             +     +K+SK+ GNVIDPI++I+  G DA+R+ L  + + G D  + +   +   N 
Sbjct: 554 ALVRDADRQKMSKTKGNVIDPIDIIQRYGTDAVRFTLASQASPGTDVAFSEARTEG--NR 611

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPT-----------PGAFTESDESILSVCSRVLQEI 401
             AN I N        I +  +                P         I +    V  E+
Sbjct: 612 AFANKIWNAARFLFMQIERAREAGYTMKMGPAAIVTALPDFTPIETRWIFARVRAVCAEV 671

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIR 456
              +       A + +         D Y +  K          NP+ A ++    V V  
Sbjct: 672 DRALTEYRFDEAASAIYQFFWGEFCDWYLELVKLRLEYVPGIQNPETAVSLAG-LVGVFE 730

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
               LL  F+P L  +I+  ++  D
Sbjct: 731 SALRLLSPFMPFLTEEIWHAMYEGD 755



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +K  +         + H+GH       D+L R+HR+ G   L+  GTD  G      
Sbjct: 41  EDPKKFTMLLPPPNVTGRLHMGHMLNQTEMDILTRWHRMRGERALWVPGTDHAGIATQMM 100

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    +                   +  Q      D    L  S D      T ++   
Sbjct: 101 VERQLASEGKKREDFSREEFIGRVWEWKAQYGGAITDQMRRLGASVDWSREYFTMDENLS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +  + K+ ++G IY+G Y   +    +   +D EV  
Sbjct: 161 AAVKECFVKLYEQGLIYRGAYIVNWDPVQQTAVSDLEVVH 200


>gi|225024476|ref|ZP_03713668.1| hypothetical protein EIKCOROL_01351 [Eikenella corrodens ATCC
           23834]
 gi|224942751|gb|EEG23960.1| hypothetical protein EIKCOROL_01351 [Eikenella corrodens ATCC
           23834]
          Length = 876

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 88/231 (38%), Gaps = 7/231 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+ + H+GH     I DV +RF ++ G +VL   G D  G     A
Sbjct: 30  SSKPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKMQGFNVLQPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N  V    +  +N    R     L  + D    I T    ++   ++L+ K+ +KG +
Sbjct: 90  AINHQVAPSKWTYENIAYMRKQLQSLGFALDWEREIATCRPEYYRWEQLLFTKLFEKGIV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  E   Y+F+++ Y ++LL+ 
Sbjct: 150 YKKLGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYFKITDYAEQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                ++   ++           G+            G+         +Y 
Sbjct: 206 L-DGLDWPEQVKTMQRNWIGKSRGMTVRFQVAADSREGLPESHREFVQVYT 255



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 17/194 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE  G D  R F++      +   +   G++          +  
Sbjct: 632 EKMSKSKNNGVDPQELIEAYGADTARLFMMFASPPEQSLEWSDAGVEGAHR--FLRRLWR 689

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVIS 419
            V   V            +  A + S + +       + ++ ++   +   + A+A V+ 
Sbjct: 690 TVYEFVQNGGSGASKFSGSQEALSGSLKDLRFKLHSTIAKVTDDYDRRQQFNTAIAAVME 749

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-F 478
           L   +++Y D         T+ +    V     EV+  + +LL   VP +   ++  L  
Sbjct: 750 L---LNQY-DKT------DTSGEHGQAV---AREVLEAVVLLLSPIVPHICETLWGELAG 796

Query: 479 VADENRCFQSLDQR 492
                + + ++D  
Sbjct: 797 GNLWQQSWPAVDNA 810


>gi|319776324|ref|YP_004138812.1| valyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317450915|emb|CBY87141.1| valyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 74/423 (17%), Positives = 141/423 (33%), Gaps = 90/423 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   +      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVKDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGF 497
            GF
Sbjct: 790 SGF 792



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|163857636|ref|YP_001631934.1| leucyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|189082984|sp|A9HWW6|SYL_BORPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163261364|emb|CAP43666.1| leuS [Bordetella petrii]
          Length = 885

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  TEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   +  ++   + L+ K+ +KG  
Sbjct: 96  AIKSKVPPAKWTYDNIAYMKKQMQAMGLAIDWSREMCACDPEYYKWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ R++ Y D+LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPGYYLRITDYADELLDQ 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
             S         R  +     K
Sbjct: 212 VRSGLPGWPERVRAMQENWIGK 233



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 88/328 (26%), Gaps = 71/328 (21%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS S        +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCSCPRCGKPARRETDTMDTFVDSSWYFMRYTSPGNDQAMVDARNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE------------ 301
               H +Y   +         L  + P  K      V +H +     +            
Sbjct: 552 HAVLHLLYARFWTRVMRDLGLLKFDEPFTKLLCQGMVLNHIYSRKNAQGGIEYFWPEEVE 611

Query: 302 ---------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                       +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NLYDAKGAITGARLKSDGSDVNYGGVGTMSKSKNNGVDPQALIDTLGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             +   +   G++   R    L +            +    D             + +  
Sbjct: 672 PEQTLEWSDSGVEGANRFLRRLWSHCHAHRDAVARGLAAGADWAQAPAPV-----KDLRR 726

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +L++   + Q    +  ++  + +++      D  K  E    +  RA T      
Sbjct: 727 EVYGLLKQADYDYQRIQYNTVVSACMKMLNA----IDDAKLPEGAHADAARAET------ 776

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVA 480
             +  L  +L   VP +   ++  L   
Sbjct: 777 --LGVLLRVLYPVVPHVTWLLWRELGYT 802


>gi|229844147|ref|ZP_04464288.1| valyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229813141|gb|EEP48829.1| valyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 140/427 (32%), Gaps = 90/427 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSQG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGFMLHK 501
            GF L  
Sbjct: 790 NGFDLEA 796



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|309973077|gb|ADO96278.1| Valyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 137/411 (33%), Gaps = 61/411 (14%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           D+ Y +   +   A     + +   V    E  YF  +   QD  +S         +P  
Sbjct: 386 DQWYVSVKPLADVAIKAVEDCEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHR-IPAW 444

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
              E   +V     ++  S+   D+ +++  D   ++  W  +     +T G+ +     
Sbjct: 445 YDTEGNVYVARNETEVR-SKYNLDFAVELKQDED-VLDTWFSSGLWTFSTLGWPEQTKEL 502

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKI 303
           K    P D+ + G DI+ F       F +           +P      +      +G+K+
Sbjct: 503 KMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKM 561

Query: 304 SKSLGNVIDPIEVIEEV-------------------------------------GVDALR 326
           SKS GNV+DPI++I+ +                                     G DALR
Sbjct: 562 SKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFADGIAAHGTDALR 621

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           + L    + G+D  +D   L+     +  N + N     ++    D          F+ +
Sbjct: 622 FTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---EIEFSLA 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D  I S  +R ++  R ++           +         D Y +  KP      N  + 
Sbjct: 677 DRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFANGNAAQI 735

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
                  V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 736 RAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQ 786



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIGAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|325528571|gb|EGD05674.1| leucyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 864

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 6/197 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     AA
Sbjct: 31  NKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  Y
Sbjct: 91  MANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            V+  E   Y+ R++ Y D+LL+  
Sbjct: 151 KKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPMYYLRITQYADELLNDL 206

Query: 181 ESHPEFILPIERRNEVI 197
           +           +   I
Sbjct: 207 DGLGWPERVKIMQQNWI 223



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I++ G D  R F +      +   +   G++         G   
Sbjct: 623 EKMSKSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVE---------GASR 673

Query: 361 LVSRSVSMILKDYD----GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R  S    + +           A  E+D+++      VL++   + Q    +  ++ 
Sbjct: 674 FLRRVWSFGYANREALAARAGFDAAALGEADKALRREIYSVLKQADFDYQRLQYNTVVSA 733

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +++ +D                        V  E    L  +L   VP +  +++  
Sbjct: 734 AMKMLNAIDG----------------AKGATPGVLRETYGVLLRVLYPVVPHVTFELWKA 777

Query: 477 LFVADE 482
           L  ADE
Sbjct: 778 LGYADE 783


>gi|240851273|ref|YP_002972676.1| leucyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240268396|gb|ACS51984.1| leucyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 886

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAL 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            + V  K +  QN    R     L +S D      T +  ++   ++L+     KG + +
Sbjct: 99  QSKVHPKTWTYQNIAVMRGQLKQLGLSLDWTREFATCDVEYYHRQQMLFLDFYQKGLVAR 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S + + LL+  E
Sbjct: 159 KVAKVNWDPVDHTVLANEQVVDG----RGWRSGALVEQRELTQWFFKISDFSEDLLAGLE 214

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
              ++   +    +       GL    
Sbjct: 215 ELEQWPEKVRTMQKNWIGKSQGLLIRW 241



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 117/386 (30%), Gaps = 81/386 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+      G           +L    +  +   P+ R     +    
Sbjct: 450 WGISRQRYWGCPIPMIHCTSCGVVPVPRTDLPVVLPDDVTFDQPGNPLARHGTWQNV--- 506

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPAD 259
                         G     +    M  ++D+   Y   T         K    ++ P  
Sbjct: 507 ---------TCPSCGQPAKRETD-TMDTFVDSSWYYARFTAPFAQEPVDKQAISEWLPVQ 556

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP--------LPKKVFSHGFILHKG------- 300
            ++ G +    H +Y      A  L  ++           + +  H              
Sbjct: 557 QYIGGIEHAILHLLYARFFMRAMKLIGHVTVDEPFKGLFTQGMVVHETYRDDQGWVSPAE 616

Query: 301 --------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                     EK+SKS  NV+DP ++I   G D +R+F++ +  
Sbjct: 617 ISIVEKDGKRQAYKLTDQSEVMIGSIEKMSKSKKNVVDPDDIIASYGADTVRWFVLSDSP 676

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G++          +   V+ S S +LKD        GA  E  ++     
Sbjct: 677 PDRDVIWTESGVEGAHR--FVQRVWRCVALSAS-VLKDVAPCAGHQGAALELSKA----A 729

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP--WELKKTNPDRASTVLYVTV 452
            R L  + ++++    +RA+A++           +   P   ++   + +  ++      
Sbjct: 730 HRTLCAVEDDLEKFAFNRAIARLYEF-------LNIMAPLLNKIASVDDEMKAS----LR 778

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           + +     ++   +P LA +    L 
Sbjct: 779 QAMDFFLAMIAPMMPHLAEECHAALG 804


>gi|67906490|gb|AAY82597.1| predicted leucyl-tRNA synthetase LeuS [uncultured bacterium
           MedeBAC35C06]
          Length = 804

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +REK Y  +   YP+ + H+GH     I DV++R+ R+   +V    G D  G     
Sbjct: 28  IDKREKFYCLSMFPYPSGKLHMGHVRNYTIGDVVSRYKRMQNFNVFQPMGWDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V+ + +   N  N +   + L +SYD    ++T +  ++   ++++ K+ +KG 
Sbjct: 88  AAIANEVSPEEWTKSNIDNMKSQLNSLGLSYDWSKELQTCDSDYYKWEQLIFTKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +   DE    +++V  G            V+  E + +F +++ Y D+LL 
Sbjct: 148 VYKKKSMVNWDPVDETVLANEQVIDGKG----WRSGAKVEIKEIDQWFIKITKYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             ++          +   I
Sbjct: 204 SIDTLDWPENVKTMQKNWI 222



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 114/288 (39%), Gaps = 35/288 (12%)

Query: 228 MYVWIDALTNYLTTT--GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
              ++D+   Y   T     D        +W P DL++ G +    H +Y   F      
Sbjct: 479 FDTFMDSSWYYARFTSADNKDEIFDENTNYWLPVDLYIGGIEHAILHLLYSRFFHKALRD 538

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +  + P  KK+ + G +L  G K+SKS GN +DP   I++ G D +R +++      
Sbjct: 539 LGLVDGDEPF-KKLLTQGMVLKDGAKMSKSKGNTVDPQSFIDKYGADTIRLYMMFTAPPE 597

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   +    ++    +     + NL        LK  D  IP P  F++ ++ + +    
Sbjct: 598 QSLEWSDKSVEGA--SRFLKRLWNLCD-----GLKYED--IPEPKNFSQEEKELRNKTHL 648

Query: 397 VLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++++ ++ +     + A+A ++ L++ + + F             D + +  +   E +
Sbjct: 649 TIKKVTDDFETRYAFNTAIASIMELLNSIPKSFVES----------DASPSQKFCLQEAV 698

Query: 456 RQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRLKPGFMLH 500
             +   L    P +  +I+   +   +N   + +   D+ L    M+ 
Sbjct: 699 ISIVQCLFPIAPHICEQIWCNFYDGSQNCIEKSWPEYDENLLESDMVP 746


>gi|18977468|ref|NP_578825.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18266873|sp|P46214|SYI_PYRFU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18893167|gb|AAL81220.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 1066

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 12/259 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+      + GY  N +    K WPAD  V G+D +   F++    + +    +
Sbjct: 549 VVDVWFDSGIASWASLGYPRNKE-LFEKLWPADFIVEGEDQVTKWFYSQQAASVIAFDTV 607

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P          +  KG+K+SKSLGN+I P EV+E+ G D  R++++      ++  +   
Sbjct: 608 PYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWK 667

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIR 402
           G+++ V   L       V  +  M L ++D            E D+ ILS  + +++E+ 
Sbjct: 668 GVEQ-VRRMLNILWNVYVLSATYMSLDNFDPRNVKVEELEFREEDKWILSRVNNLIKEVE 726

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             ++   + +A   + + V       Y     ++ W  +  +PD+ +   Y   +V   L
Sbjct: 727 NGIETFYLTKATRALYNFVVEDLSRWYVRLIRKRLWV-EGDDPDKLAA-YYTLWKVFDVL 784

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F P +  +I+  +
Sbjct: 785 LRLMAPFTPYITEEIYQNI 803



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 22/184 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I   
Sbjct: 37  KNGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVWRQPGYDMHGLPIEVK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            + A                      K F   N R   +   +L +   +D+   T +  
Sbjct: 97  VEQALGLKTKKEIEEKIGVENFIQKCKEFALNNLRIMTEQFKMLGVWMDWDNPYMTIKNE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQW 159
           + ++     K+  +KG + K      +  R E    + EV                PV+ 
Sbjct: 157 YIESAWFTLKRAWEKGLLEKDKRVLHWCPRCETALAEHEVRGEYKLRKDPSIYVKFPVEG 216

Query: 160 MEEE 163
            E E
Sbjct: 217 KENE 220


>gi|329894351|ref|ZP_08270221.1| Valyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923147|gb|EGG30470.1| Valyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 920

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/393 (17%), Positives = 131/393 (33%), Gaps = 82/393 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          ++  E+     +P +  N   ++++  ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVDAKKLAIPAIAAVENGDIEFVPKQWENTYFAWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 406 GHRIPAWYDQGGKVYVGSTEAAVRAQHQLDDSVVLRQDDDVLDTWFSSALWTFSTLGWPS 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKIS 304
                  ++ P  + V G DI+ F         L     +P K V+ HG +   +G+K+S
Sbjct: 466 ETA-ELQRYHPTSVLVTGFDIIFFWVARMIMMTLHFKREVPFKTVYVHGLVRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNV+DPI++I                                        G DALRY
Sbjct: 525 KSKGNVLDPIDLIDGIDLESLVSKRTAGMMQPQKAKAIEKATRKHFPDGIPSYGTDALRY 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 + G+D  +D   ++     +  N I N  SR V    ++ D          +++
Sbjct: 585 TFYSLASTGRDIRFDLGRIEG--YRNFCNKIWN-ASRYVMTQCENVDLNGAR--ELGDAE 639

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP--DR 443
             I     + L+ +  +M +     A   +         D Y +  KP  L   N    R
Sbjct: 640 RWIQGRLHQTLKHLENSMAHYRFDHASQSLYEFFWNDYCDWYLEFSKP-VLWDDNASGAR 698

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                +  V V+     +L  F+P +  +I+  
Sbjct: 699 KRGTYHTLVSVLEAALRMLHPFMPFITEEIWQR 731



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 20/166 (12%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA---- 65
            I  PN     H+GH ++  I D L R+HR+ G D L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHGFQDTIMDALIRYHRMQGCDTLWQPGTDHAGIATQMVVERQLEAQ 95

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                             +  Q+          L  S D      T +    D  + ++ 
Sbjct: 96  GIKRHDIGRDAFVDKVWEWKAQSGGTITSQLRRLGASLDWSRERFTMDPGLSDAVQKVFI 155

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            + ++G IY+G     +  +     +D EV    +         P+
Sbjct: 156 DLYNEGLIYRGQRLVNWDPKLHTAVSDLEVLNEEEQGSLWHFRYPI 201


>gi|261393229|emb|CAX50850.1| leucyl-tRNA synthetase (leucine--tRNA ligase; LeuRS) [Neisseria
           meningitidis 8013]
          Length = 876

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R F++      +   +   G++       A+    
Sbjct: 633 EKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R+V   LK  + +    G+    ++  + +         ++ ++  + Q  + A+A 
Sbjct: 687 RLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAA 746

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+ L+++ D+            T  ++   V     EV+     LL   VP +   ++  
Sbjct: 747 VMELLNQYDK----------TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSE 793

Query: 477 LFVAD-ENRCFQSLDQR 492
           L  A      + ++D+ 
Sbjct: 794 LNGAKLWEAGWPTVDEA 810


>gi|239947311|ref|ZP_04699064.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921587|gb|EER21611.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 834

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKDWTYSNIENMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+    + +F +++ Y ++LL+ 
Sbjct: 144 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   I    E       G
Sbjct: 200 IQNLKEWPEAIRFMQEKWIGKSIG 223



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 128/389 (32%), Gaps = 36/389 (9%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEACGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFTRYCNSNATDMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R+F++ +    KD  +   
Sbjct: 585 KFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRFFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++               SR ++ +   ++ +       TE  + +  +    ++ + E+
Sbjct: 645 GIEG-------------CSRFINRLEHMFEAIDSLKDDITEISKELNRLVYFTIKHVAED 691

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 692 IKHFALNRAIARMRELSNAISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 738

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 739 FIPHITEEIWQKLGNKERLYNSSFPAFDE 767


>gi|124485013|ref|YP_001029629.1| isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166229749|sp|A2SPV6|SYI_METLZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|124362554|gb|ABN06362.1| Isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 1066

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/407 (17%), Positives = 142/407 (34%), Gaps = 69/407 (16%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +      P+ +     +F ++   ++K+L        +  P    +          +D  
Sbjct: 394 HCWRCKTPIIYRATSQWFLKVKDIREKMLEEIADEVTWY-PEWAGSARFHDWVEEARDWC 452

Query: 209 LSRKTFDWGIKI---------------------------PDDPQ---------------- 225
           +SR+   WGI I                             DP                 
Sbjct: 453 ISRQR-YWGIPIPVWVCPVCNKYHVVGRYEELEQLSGQKMTDPHRPYVDDITIPCECGGT 511

Query: 226 -----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I  VW D+      T  + + P+    K+WPAD  + G D     F++    + 
Sbjct: 512 MKRIPDIFDVWYDSGIASWATLRFPEKPE-DFGKYWPADFILEGHDQTRGWFYSQLALST 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P    +     +  +G+K+SKSLGNVI P +V ++ GVD +R +++   A   D
Sbjct: 571 IAFGKAPYKSVLMHGFALDAEGKKMSKSLGNVIAPEDVAKQFGVDVMRQYILSANAPWDD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGM----IPTPGAFTE-------S 386
             +  +G+K   N  + N + N+    +  M L  Y       +  P A  +        
Sbjct: 631 MRFSLEGVK--TNHRMFNVLWNVYKFPLPYMALDGYKPAAKDGVWDPSAVEDHISEFCRE 688

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVD-RYFDAQKPWELKKTNPDRA 444
           D  ++S  + + +++ + M+   +HRA   + + +  E+   Y    +P    +      
Sbjct: 689 DRWLISRVNSLAEQVTKEMEVCNLHRATRPISTFILDELSRWYVQLVRPRMWLEEESVSK 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                    V+R+L  +   F P +   ++  L    +      +D 
Sbjct: 749 MQAYDTMYYVMRRLVTIFAPFAPHITECMYQNLRCEGDLPSVHMVDW 795



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +         Y     H+G A+  I+ D + R+H + G  ++   G D HG  I   
Sbjct: 35  ESGKPWLFVDGPPYTTGYIHLGTAWNKILKDAILRYHSMTGQHIIERAGYDMHGLPIEVK 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       + F   +     +    L   + +DD  +T +K +
Sbjct: 95  VEEKLGFKNKADIEKYGVAKFIEECREFALTHKDLMSEQFKDLGTWMDFDDPYQTVDKGY 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +      K+  ++  + +G     +  R      D EV    +         P+Q  E 
Sbjct: 155 IEAAWYTLKRCEEEKMLERGSRVVNWCPRCGTAIADAEVEYWDETDPSIFVKFPIQGTEN 214

Query: 163 E 163
           E
Sbjct: 215 E 215


>gi|218767529|ref|YP_002342041.1| leucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|14285776|sp|Q9JW39|SYL_NEIMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121051537|emb|CAM07834.1| putative leucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319409793|emb|CBY90101.1| leucyl-tRNA synthetase (leucine-tRNA ligase; LeuRS) [Neisseria
           meningitidis WUE 2594]
          Length = 910

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 130/367 (35%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S     P         +
Sbjct: 519 FYETTCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVD 573

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 574 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 629

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R       A L    LP+   V S        EK+SKS  N 
Sbjct: 630 GKDWINPADVELTFDDKGRP----VSAVLKVDGLPV---VISGT------EKMSKSKNNG 676

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 677 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 730

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K  + +    G+    ++  + +       + ++ ++  + Q  + A+A V+ L+++ D+
Sbjct: 731 KQGEAVNAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAAVMELLNQYDK 790

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
                       T  ++  TV     EV+     LL   VP +   ++  L  A      
Sbjct: 791 ----------TDTGSEQGRTV---AQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 837

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 838 WPAVDEA 844


>gi|16273301|ref|NP_439545.1| valyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580773|ref|ZP_05848599.1| valyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174549|sp|P43834|SYV_HAEIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1574225|gb|AAC23038.1| valyl-tRNA synthetase (valS) [Haemophilus influenzae Rd KW20]
 gi|260092590|gb|EEW76527.1| valyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 141/423 (33%), Gaps = 90/423 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGF 497
            GF
Sbjct: 790 SGF 792



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+ TGTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQTGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|325285980|ref|YP_004261770.1| Isoleucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321434|gb|ADY28899.1| Isoleucyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 1133

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 100/279 (35%), Gaps = 8/279 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         + K +PAD    G D     F+ ++
Sbjct: 594 KPMKRESDLIDVWFDSGSMPYAQWHYPFENKELIDENKAYPADFIAEGVDQTRGWFYTLH 653

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + ++  ++     V +   +   G+K+SK LGN +DP E + + G DA R++++    
Sbjct: 654 AISTMVFDSVAYKNVVSNGLVLDKDGKKMSKRLGNAVDPFETMNQFGPDATRWYMISNAN 713

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+ +                ++   +  +             E D+ ILS
Sbjct: 714 PWDNLKFDLEGIAEVKRKFFGTLYNTYSFFALYANIDKFSYSEKDVALNERPEIDQWILS 773

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
               ++ ++ +   +    +A   + + V E   + Y    +    K        +    
Sbjct: 774 ELHTLINKVDQAYADYEPTKAARLISNFVQENLSNWYVRLCRRRFWKGDYQQDKISAYQT 833

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               +  +A L     P   ++++  L  A      +S+
Sbjct: 834 LYTCLETVARLASPIAPFFMDRLYKDLTQATTKEKAESV 872



 Score = 53.2 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 59/205 (28%), Gaps = 23/205 (11%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D+  R+  + G  V    G D HG  I    +     TK  
Sbjct: 47  PPSANGMPGIHHVMARTIKDIFPRYKTMKGYQVKRKAGWDTHGLPIELGVEKELGITKED 106

Query: 73  VDQ--------------------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           + +                          +         D +I T + ++ ++   L K+
Sbjct: 107 IGKKISVEEYNAACKKAVMRYTDVWNKMTEQVGYWVDMNDPYI-TYKSKYMESVWWLLKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           I  K  IYKG     YS +     +  E+     G Y +     V    +        A+
Sbjct: 166 IYSKDLIYKGYTIQPYSPKAGTGLSSHEL--NQPGTYQDVTDTTVTAQFKAHKETLPEAF 223

Query: 173 QDKLLSYYESHPEFILPIERRNEVI 197
           ++     Y             N  +
Sbjct: 224 KNVDGDVYFIAWTTTPWTLPSNTAL 248


>gi|254670920|emb|CBA07514.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 912

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 130/367 (35%), Gaps = 50/367 (13%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +Y       G  G           +ME   YFFR   Y     S     P         +
Sbjct: 521 FYETTCPCCG--GAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVD 575

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA 253
           + I  ++  +  L  +R    +  K+  D   + +    + L             +  K 
Sbjct: 576 QYIGGIEHAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKG 631

Query: 254 -KFW--PADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
            K W  PAD+ +   D  R       A L    LP+   V S        EK+SKS  N 
Sbjct: 632 GKDWINPADVELTFDDKGRP----VSAVLKVDGLPV---VISGT------EKMSKSKNNG 678

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP E+I   G D  R F++      +   +   G++       A+     + R+V   L
Sbjct: 679 VDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYL 732

Query: 371 KDYDGMIPTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDR 426
           K  + +    G+    ++  + +       + ++ ++  + Q  + A+A V+ L+++ D+
Sbjct: 733 KQGEAVNAFAGSQDGLSKELKDLRHKLHATIAKVSDDYGRRQQFNTAIAAVMELLNQYDK 792

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRC 485
                       T+ ++   V     EV+     LL   VP +   ++  L  A      
Sbjct: 793 ----------TDTSGEQGRAV---AQEVLEAAVRLLWPIVPHICETLWSELNGAKLWEAG 839

Query: 486 FQSLDQR 492
           + ++D+ 
Sbjct: 840 WPAVDEA 846


>gi|255530334|ref|YP_003090706.1| isoleucyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343318|gb|ACU02644.1| isoleucyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 1129

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 108/287 (37%), Gaps = 14/287 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y             +PAD    G D     F+ ++
Sbjct: 592 KPMKRESDLIDVWFDSGAMPYAQWHYPFENKDKVDSGTDFPADFIAEGVDQTRGWFYTLH 651

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L+   +     V +   +   G+K+SK LGN  DP + +EE G DA R++++    
Sbjct: 652 AIGALVFDKVAYKNVVSNGLVLDKNGQKMSKRLGNAADPFKTLEEYGPDATRWYMISNAN 711

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTESDESIL 391
              +  +D +G+ +                ++   +  ++            +E D  IL
Sbjct: 712 PWDNLKFDIEGIAEIRRKFFGTLYNTYAFFALYANIDKFEIDQDNLTPVAERSELDRWIL 771

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF--DAQKPWELKKTNPDRASTV 447
           S+   ++ E+ E+  +    +A   + + V E   + Y     ++ W+ + T   +A+  
Sbjct: 772 SLLQTLIAEVDESYNSYEPTKATRAIQAFVDEHLSNWYIRLSRRRFWKGEMTADKKAA-- 829

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                  +  +A ++    P  A+ ++  L  A EN   +S+   L 
Sbjct: 830 YETLYTCLISVAQMMAPVAPFFADWLYRNLS-ATENNAAESIHLALW 875



 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 23/152 (15%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV- 71
               N  P I H     I D+  R+    G  V    G D HG  +    +     TK  
Sbjct: 46  PPSANGMPGIHHVMARAIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGTEKELGITKED 105

Query: 72  --------------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                               + D  +     M   +D+S D ++ T + ++ ++   L K
Sbjct: 106 IGKTISIEAYNEACKKTVMRYTDVWNDLTEKMGYWVDMS-DPYV-TYKSKYMESVWWLLK 163

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +I DKG +YKG     YS +     +  EV +
Sbjct: 164 QIYDKGLLYKGYTIQPYSPKAGTGLSSHEVNQ 195


>gi|167748387|ref|ZP_02420514.1| hypothetical protein ANACAC_03131 [Anaerostipes caccae DSM 14662]
 gi|167652379|gb|EDR96508.1| hypothetical protein ANACAC_03131 [Anaerostipes caccae DSM 14662]
          Length = 1038

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 122/384 (31%), Gaps = 12/384 (3%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEGYFFRLS-- 170
               +  +     ++D+   N++ V    +    G++ +   N   W      ++     
Sbjct: 396 YYARESWFIKMTDVKDQLIKNNNTVNWIPENIGKGRFGDWLENVQDWGISRNRYWGTPLN 455

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            ++ +    +       L     N              ++ K  + G K     + ++  
Sbjct: 456 VWECECGHQHAIGSIEELKSMSDNCPEDIELHRPYIDDVTVKCPECG-KEMRRVEEVIDC 514

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           W D+ +       Y         + +PAD      D     F+++   + LL    P   
Sbjct: 515 WFDSGSMPFAQWHYPFENKEIFEENFPADFISEAVDQTRGWFYSLLAISTLLFDKAPYKN 574

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +         G+K+SKS GN +DP+E + E G DA+R++     A      +    + +
Sbjct: 575 VIVLGHVQDENGQKMSKSKGNAVDPMEALAEHGADAIRWYFYTNSAPWLPNRFHGKAVTE 634

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQ 406
                +           +   +  +D              D  +LS  + +++ + EN+ 
Sbjct: 635 GQRKFMGTLWNTYAFYVLYAEIDQFDPTKYSLDHDKLPVMDRWLLSKLNSLVRTVDENLG 694

Query: 407 NQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              I  A   +   V E+ + Y    +     K                +  +       
Sbjct: 695 AYRIPEAARALQEFVDEMSNWYVRRCRERFWAKGMEQDKINAYMTLYTALTTVCKAAAPM 754

Query: 466 VPKLANKIFDILFVADENRCFQSL 489
           +P +  +I+  L  + +    +S+
Sbjct: 755 IPFMTEEIYQNLVKSVDQEAPESI 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G  ++   G D HG  +   
Sbjct: 36  KGDDTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHKIIRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D + V+      DD   T    +
Sbjct: 96  VEKKLGLDGKEQIEEYGLAPFIKECKESVWKYKGMWEDFSGVVGFWADMDDPYVTYHNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 156 IESVWWALKQIWDKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYKDVKEKSAIARFKVKDE 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DAYILAWT 223


>gi|242399103|ref|YP_002994527.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265496|gb|ACS90178.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 1070

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 82/414 (19%), Positives = 161/414 (38%), Gaps = 27/414 (6%)

Query: 102 HHDTCRILWKKISDKGDIYK---GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              T +   K    K  I +      + +       Y N                  P+ 
Sbjct: 413 FRATDQWFLKISKVKDKIIEENDKKVTWYPDWVKIRYDNGVMHSGDWCISRQRYWGIPLP 472

Query: 159 -WMEEEGYFFRLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W  E+G  + +  +++ +      E + E I   E  +E +  ++  L    L R   D
Sbjct: 473 IWSSEDGEIYIVGTFEELVELSVAIEVNGERIELPESYDEKLRVIEEKLGPEDLHRPYVD 532

Query: 216 -WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            + IK+ +        ++ VW D+      +  Y    D    + WPAD  V G+D +  
Sbjct: 533 AFVIKVNNKEMKRVKDVLDVWFDSGIASWASLDYPRRKD-LFERLWPADFIVEGEDQVTK 591

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    + +    +P  K       +  KG+K+SKSLGN+I P +VI++ G D  R++
Sbjct: 592 WFYSQQAASVVAFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEDVIQKDGRDPFRFY 651

Query: 329 LVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-- 384
           ++      ++  +   GL   KR+   L N        S  M L ++D     P      
Sbjct: 652 MLWATTPWENLRFSWKGLAQVKRMLNILWNVYILS---STYMSLDNFDPTKLNPEELPFR 708

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTN 440
           E D+ ILS  + ++  + + +++  + +A   + + +       Y     ++ W  ++ +
Sbjct: 709 EEDKWILSKVNNLISTVEDGLESFYLTKATRGIENFIIEDLSRWYVRVIRKRLWV-ERDD 767

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           PD+ +   +   ++   L  L+  F P +  +I+  L     N+    L+   K
Sbjct: 768 PDKLAA-YWTLWKIFDVLLRLMAPFTPYITEEIYQNLIRPFSNKESVHLEDWPK 820



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 20/160 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +     Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I   
Sbjct: 37  ETGPDYYFLDGPPYVSGAIHLGTAWNKIIKDMVIRFRSMQGYNVRRQPGFDMHGLPIEVK 96

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            + A                      + F   N +   +   +L +   +D+   T +  
Sbjct: 97  VEQALGLKYKKDIEEKVGVENFIKKCRDFALTNLKIMTEQFKMLGVWMDWDNPYMTIKNE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + ++     K+  + G + K      +  R E    + EV
Sbjct: 157 YIESAWFTLKRAWENGLLEKDQRVLHWCPRCETALAEHEV 196


>gi|301170146|emb|CBW29750.1| valyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 141/423 (33%), Gaps = 90/423 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGF 497
            GF
Sbjct: 790 SGF 792



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLVRFNRMEGHNTLWQAGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T +    
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|145639009|ref|ZP_01794617.1| valyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145271981|gb|EDK11890.1| valyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750969|gb|ADO80953.1| Valyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 141/423 (33%), Gaps = 90/423 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSEGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQRLK 494
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q  +
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQVEE 789

Query: 495 PGF 497
            GF
Sbjct: 790 SGF 792



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 65/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T ++
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|170719813|ref|YP_001747501.1| leucyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229560000|sp|B1J150|SYL_PSEPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169757816|gb|ACA71132.1| leucyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 868

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L   I +   + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+FR++ Y D+LL   
Sbjct: 151 RKNGTVNWDPADQTVLANEQVIDG----RGWRSGALIEKREIPMYYFRITDYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGKSRGM 230



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +IE  G D  R F++          +   G++         G   
Sbjct: 626 EKMSKSKNNGVDPQSMIEAYGADTCRLFMMFASPPDMSLEWSDSGVE---------GASR 676

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQ 416
            + R   +     +  +P      A  +  + I       +++   ++      + A+AQ
Sbjct: 677 FLRRVWRLAQGHVNQGLPGKLDLAALNDEQKVIRRAIHTAIKQASTDVGQYHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+++++ +      + P   + T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 737 VMTVMNVL-----EKAP---QSTEQDRA-----LLQEGLEAVTLLLAPITPHISHELWKA 783

Query: 477 LFVADE--NRCFQSLDQ 491
           L       + C+  +D+
Sbjct: 784 LGHEQAVIDACWPVVDE 800


>gi|317472078|ref|ZP_07931410.1| isoleucyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900482|gb|EFV22464.1| isoleucyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 1038

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 122/384 (31%), Gaps = 12/384 (3%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEGYFFRLS-- 170
               +  +     ++D+   N++ V    +    G++ +   N   W      ++     
Sbjct: 396 YYARESWFIKMTDVKDQLIKNNNTVNWVPENIGKGRFGDWLENVQDWGISRNRYWGTPLN 455

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            ++ +    +       L     N              ++ K  + G K     + ++  
Sbjct: 456 VWECECGHQHAIGSIEELKSMSDNCPEDIELHRPYIDDVTVKCPECG-KEMRRVEEVIDC 514

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           W D+ +       Y         + +PAD      D     F+++   + LL    P   
Sbjct: 515 WFDSGSMPFAQWHYPFENKEIFEENFPADFISEAVDQTRGWFYSLLAISTLLFDKAPYKN 574

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +         G+K+SKS GN +DP+E + E G DA+R++     A      +    + +
Sbjct: 575 VIVLGHVQDENGQKMSKSKGNAVDPMEALAEHGADAIRWYFYTNSAPWLPNRFHGKAVTE 634

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQ 406
                +           +   +  +D              D  +LS  + +++ + EN+ 
Sbjct: 635 GQRKFMGTLWNTYAFYVLYAEIDQFDPTKYSLDHDKLPVMDRWLLSKLNSLVRTVDENLG 694

Query: 407 NQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              I  A   +   V E+ + Y    +     K                +  +       
Sbjct: 695 AYRIPEAARALQEFVDEMSNWYVRRCRERFWAKGMEQDKINAYMTLYTALTTVCKAAAPM 754

Query: 466 VPKLANKIFDILFVADENRCFQSL 489
           +P +  +I+  L  + +    +S+
Sbjct: 755 IPFMTEEIYQNLVKSVDQEAPESI 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G  ++   G D HG  +   
Sbjct: 36  KGDDTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGHKIIRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D + V+      DD   T    +
Sbjct: 96  VEKKLGLDGKEQIEEYGLAPFIKECKESVWKYKGMWEDFSGVVGFWADMDDPYVTYHNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DKG +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 156 IESVWWALKQIWDKGLLYKGYKIVPYCPRCGTPLSSHEVAQGYKDVKEKSAIARFKVKDE 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DAYILAWT 223


>gi|170586498|ref|XP_001898016.1| Valyl-tRNA synthetase [Brugia malayi]
 gi|158594411|gb|EDP32995.1| Valyl-tRNA synthetase, putative [Brugia malayi]
          Length = 1359

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 77/485 (15%), Positives = 144/485 (29%), Gaps = 65/485 (13%)

Query: 43   LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
             ++ F T   + G    +  +   +      D      +        S +  +     R 
Sbjct: 697  HNLPFITCFTDDGNMSEQCGEFKNMKRFDARDAVLEALKKKGLFRGQSDNPMVVPLCSRS 756

Query: 103  HDTC------RILWKKISDKGDIYKGCYSGW-YSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             D        +   K         +    G    + D       +  +       + Q  
Sbjct: 757  KDIVEPILKSQWYVKCDQMAQRAIEAVEEGHLKIIPDFHAVTWRKWLENIRDWCISRQL- 815

Query: 156  PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               W       + ++    K+ +    + ++ +      E +                  
Sbjct: 816  ---WWGHRIPAYFVTVDDPKVSAGTSDNNDYWVSAHNEAEALEKAARKFDVSEEK----- 867

Query: 216  WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
              + +  D   ++  W  +        G+ +       KF+P+ L   G DIL F    +
Sbjct: 868  --VSVKRDED-VLDTWFSSGMWPFEVFGWPEKTA-DLDKFFPSTLLETGHDILFFWVARM 923

Query: 274  YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--------------- 318
             + +  L+  LP  +           G K+SKSLGNVIDP+ VI                
Sbjct: 924  VFMSQELTGKLPFQEVYLHAMIRDAHGRKMSKSLGNVIDPLNVIYGASLTQLTKILESGN 983

Query: 319  ----------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                  E G DALR+ L+   +  +D   D   ++        N
Sbjct: 984  LDPKELKRAKEGQAHDYPNGIPECGTDALRFALLNYTSQCRDINLDVLRIQG--YRFFCN 1041

Query: 357  GIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             I      ++  +  ++        P   +  D  ILS  S  ++     M +   +R  
Sbjct: 1042 KIWQASRFTLMQLRNNFAPAEKFVLPEESSTLDRWILSRLSYAVESSNSGMSSYQFNRVT 1101

Query: 415  AQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
              + +       D Y +  KP      NP+ A  V  V  E +     LL  F+P +  +
Sbjct: 1102 TTLYNFWLYEFCDIYIEGCKPVLAGSGNPNGAEIVRKVLFECVETGLRLLSPFMPFITEE 1161

Query: 473  IFDIL 477
            ++  L
Sbjct: 1162 LWQRL 1166



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 10/139 (7%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K   K   +  I  PN     H+GHA    + D + R+HR+ G  VLF  G D  G    
Sbjct: 433 KPNPKGIFTVVIPPPNVTGTLHLGHALATSVEDAVCRWHRMKGKTVLFNPGCDHAGIATQ 492

Query: 60  KAAQNAGVTTKVFVD------QNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWK 111
              +                 +      +    +   + +D      + +        + 
Sbjct: 493 VVVEKRLKRELGLTRHDLGRERKGEVIYNQLRKMGAGVDWDRACFMMDPKITRAVTHAFI 552

Query: 112 KISDKGDIYKGCYSGWYSL 130
            + +KG IY+      +  
Sbjct: 553 VMHEKGIIYRSNRLVNWCC 571


>gi|325135488|gb|EGC58106.1| leucyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325143787|gb|EGC66104.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 876

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 490 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 546

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 547 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 602

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R  +    A  L         V S        EK+SKS  N +DP E+I
Sbjct: 603 ADVELTFDDKGRPISAVLKADGLP-------VVISGT------EKMSKSKNNGVDPQELI 649

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 650 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 703

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 704 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 756

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 757 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 810


>gi|47220815|emb|CAG00022.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 797

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 5/200 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+ +   YP+ + H+GH     I+D +  F R+ G  VL   G D  G     AA 
Sbjct: 1   KKKFYVLSMFPYPSGRLHMGHVRVYTISDTIGHFQRMRGHQVLNPMGWDAFGLPAENAAI 60

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +   N ++ R+  D L     +D  + T    ++   + L+ K+ + G  Y+
Sbjct: 61  ERGLDPEEWTKSNIQSMREQLDSLGLCFDWDREVTTCHPDYYKWTQYLFIKLYEAGLAYQ 120

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    D++V    +          V+    + +F + + Y   LL    
Sbjct: 121 KEAVVNWDPADQTVLADEQV---DENGRSWRSGAVVEQKLLKQWFIKTTNYAKPLLDSLA 177

Query: 182 SHPEFILPIERRNEVISFVK 201
             PE+      +   I    
Sbjct: 178 DLPEWYGVKAMQANWIGECS 197



 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 60/419 (14%), Positives = 103/419 (24%), Gaps = 118/419 (28%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV   E  G            L    S                  K      
Sbjct: 372 QRYWGTPIPVVHCESCGTVAVPEEELPVTLPKLTSLTGIGASPLEAAHDWVNCKCPRCKG 431

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y          D   A  W P D+++ GK+
Sbjct: 432 PARRET---------DTMDTFVDSAWYYFRYTDPRNPHRPFDSQLADHWLPVDVYIGGKE 482

Query: 267 ILRFHAIYWPAFLLSA----------------------NLPLPKKVFSHGFILHK----- 299
               H  Y                                   +          +     
Sbjct: 483 HAVMHLYYARFLSHFCRDLGLVAHREPFWKLLVQGLIKGQTFKRADSGQYLKREEIDFTG 542

Query: 300 --------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                          EK+SKS  N +DP +V+++ GVD +R +++      +D  ++   
Sbjct: 543 KEPVARDGGRVEVTFEKMSKSKHNGLDPQDVVQQYGVDTVRLYILYAAPPEQDILWNVK- 601

Query: 346 LKKRVNADLANGIGNLVSRSVSMILK--------DYDGMIPTPGAFTESDESILSVCSRV 397
                  D   G+    SR   ++ K        D               + I    +  
Sbjct: 602 ------TDALPGVLRWQSRLWQLVTKLRGARQLGDVPVPTSLKKKELAEAKKIWENMNYT 655

Query: 398 LQE-----IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           +QE     + ++  +     ALA                                     
Sbjct: 656 IQESATVRVVQH--SLEFEEALAA------------------------------------ 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
                L ++     P LA++++    +   N     L QR   G +L + +  + P++L
Sbjct: 678 -----LVLMTAPMAPHLASELWA--GLCQVNHPLSELLQR--GGDVLQQQWPTVDPKYL 727


>gi|325206804|gb|ADZ02257.1| leucyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 878

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 492 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 548

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 549 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 604

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R  +    A  L         V S        EK+SKS  N +DP E+I
Sbjct: 605 ADVELTFDDKGRPISAVLKADGLP-------VVISGT------EKMSKSKNNGVDPQELI 651

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 652 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 705

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 706 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 758

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 759 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 812


>gi|319956024|ref|YP_004167287.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418428|gb|ADV45538.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 812

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 89/287 (31%), Gaps = 9/287 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR+ R  G++VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYAIGDALARYWRKQGVNVLHPIGWDAFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                K +   N    R     L +S+  +    T +  +    +    ++ + G +Y+ 
Sbjct: 91  HKRHPKEWTYDNIAYMRKELGALGLSFSKEREFATCDPLYTRWEQEFIIRMFEGGLLYRE 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +         +++V +G          NPV   E  GY+  +  Y  +LL   E 
Sbjct: 151 STTVNWCETCHTVLANEQVEEG----CCWRCDNPVVQREMPGYYIDIVRYAQELLDDLEQ 206

Query: 183 -HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID--ALTNYL 239
              ++   +            GL+            +    D   +     D      Y 
Sbjct: 207 LEGKWPAQVLTMQRNWIGRSQGLEFRFELNDASKAKLNGCFDGYEVFTTRPDTIFGVTYS 266

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPL 286
                              D  +   + +   +    A       PL
Sbjct: 267 ALAPEHPIVRHLIEHKLLDDEVIERIEAIINMSERERAQAEKEGYPL 313



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 96/271 (35%), Gaps = 40/271 (14%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------ 278
           +I   W                 D   + +W P D ++ G +    H +Y   F      
Sbjct: 495 FIQSSWYQFRYATDPKKWNETGIDKEDSAYWMPVDQYIGGIEHAILHLLYARFFTKALRD 554

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 + P   ++ + G +L  G K+SKS GN +DP  ++E  G D  R F++      
Sbjct: 555 LGYHDIDEPF-SRLLTQGMVLKDGAKMSKSKGNTVDPDAIVERYGADTARLFILFAAPPQ 613

Query: 337 KDGFYDKDGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
           K+  +   G++   R    L +    +  RS+  I            A     +   +  
Sbjct: 614 KELEWKDSGVEGAYRFLKKLYSRKEKVSHRSLPEI---------DHDALAPEAKEARAKV 664

Query: 395 SRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              L++  +  +     +  +A  +  ++ +D+                   +   V  E
Sbjct: 665 YEALRKSGDVYEKTFAFNTLIAATMEALNALDK------------------QSDPAVWSE 706

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +  L  LL+  VP +A+++ + LF  +  R
Sbjct: 707 GMYILLHLLEPIVPHIASELSEELFGRENLR 737


>gi|228470058|ref|ZP_04054969.1| valyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308332|gb|EEK17181.1| valyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 887

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 80/417 (19%), Positives = 149/417 (35%), Gaps = 55/417 (13%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            EA   D E        Y       ++      +F ++S      L         ++P +
Sbjct: 333 KEAGLLDHEEDYNNRVGYSERTDVAIEPKLSMQWFLKMSELAKPALQAVLEDTVQLVPKK 392

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
             N    +    +KD  +SR+   WG +IP                              
Sbjct: 393 FVNT-YRYWLENIKDWCISRQ-LWWGHRIPAYYLPNGQFVVAATAEEALAKAKQETGDNS 450

Query: 222 ------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFH-- 271
                 +     +  W  +    ++  G +D  + ++    F+P  + V G DIL F   
Sbjct: 451 LTLEQLNQESDCLDTWFSSWLWPISLFGKIDGSEPTEDLKYFYPTSVLVTGPDILFFWVA 510

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +    +    + P  K   +      KG K+SKSLGN  DPI+++++ G D +R  L+ 
Sbjct: 511 RMIMAGYHFMGDRPFDKVYLTGIVRDDKGRKMSKSLGNSPDPIDLMDKYGADGVRLGLMM 570

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G D  YD+  +++    +  N I N      +  + D    +    A   + E   
Sbjct: 571 ATSAGNDLLYDESLVEQ--GRNFCNKIWNSYRFLKTQSVSD---EVKPDAASLIAMEWFE 625

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S+ +  + E+ +      I  A+  +  LV +     Y +A KP      + D    V  
Sbjct: 626 SLLASTMSELDDLFDKYRISDAVTLLYKLVRDDFSGLYLEAIKPAYGTSMSRD----VYE 681

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
            T+    Q+ ILL  F+P +  +++  +      ++  +  LD  L+    L    +
Sbjct: 682 RTIHYFEQIFILLHPFMPFITEELWQDVAPRQEGDSIMYAHLDDTLQADKQLLADME 738



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 40  SKKPYTIIMPPPNVTGVLHMGHMLNNTIQDILIRRARIAGYNACWVPGTDHASIATEAKV 99

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
            +                       + D+           L +S D + RT    ++   
Sbjct: 100 VDQLAKQGIQKNQLTREDFLKHAWEWTDKYGGIILSQLRRLGVSCD-WSRTAFTLDEERS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++   ++ K+ ++G IY+G     +  + +   +D+EV  
Sbjct: 159 ESVINVFCKLYEEGLIYRGVRVVNWDPKAQTALSDEEVIF 198


>gi|170718976|ref|YP_001784139.1| valyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083630|sp|B0USP0|SYV_HAES2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|168827105|gb|ACA32476.1| valyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 954

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 134/399 (33%), Gaps = 86/399 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E+     +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVATKAVENGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDEQGNVYVARDEAEVRSKYGLTSDVALKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFEHGISAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRYVLTHEKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   R  ++          +         D Y +  KP     
Sbjct: 671 AEYSLADRWIESQFNRTIDAFRTALKQYRFDLVANTIYDFTWNQFCDWYLELTKPVFAHG 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+  +  T   + + ++ +L  L    +P +  +I+  L
Sbjct: 731 TDAQKRGT-SRMLLNILEKLLRLAHPIIPFITEEIWQKL 768



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++  + D L RF+R++G + L+ TGTD  G       + 
Sbjct: 39  PSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 98

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 99  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|327282139|ref|XP_003225801.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 904

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +ARF ++ GL V+   G D  G     A
Sbjct: 79  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDTVARFQKMRGLRVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R   D L +S+  D  I T    ++   + ++ K+ + G +
Sbjct: 139 AIEHGLHPAQWTQSNIQHMRKQLDALGLSFSWDREIATCFSEYYKWTQYIFLKLYEAGLV 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   VQ    + +F + SAY   +L  
Sbjct: 199 YQNEAMVNWDPVDQTVLANEQVDENGCSWRSGAK---VQKKYLKQWFIKTSAYAKSMLDG 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               P++    E +   +   
Sbjct: 256 LSDLPKWYGIKEMQANWLGDC 276



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 69/475 (14%), Positives = 144/475 (30%), Gaps = 88/475 (18%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-LWKKISDKG 117
           AK+     +  K+ +     +   +A  L +S+++ I T             +  +S + 
Sbjct: 362 AKSEFEGYLDAKIGIPCTEADDAKVARSLGLSFEEVIETLSDGSQRLIHSGEFTGMSRQQ 421

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +                 ++         Q Y     PV   +  G            L
Sbjct: 422 ALNAITEQAKNKGVGGYLTSNKLKDWLISRQRYWGTPIPVIHCQSCGPVPVPYEDLPVQL 481

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
               S                            R+T         D              
Sbjct: 482 PNIASFTGKGGSPLASISDWVNCCCPKCKKPSRRET---------DTMDTFVDSAWYYLR 532

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPK 288
           Y          D   A  W P DL++ GK+    H  Y        +         P  K
Sbjct: 533 YTDPHNTERAFDKDLADHWMPVDLYIGGKEHAVMHLYYARFINHFCHDQKMTKHREPFHK 592

Query: 289 ------------KVFSHGFILHKGE----------------------KISKSLGNVIDPI 314
                       ++ + G  L +GE                      K+SKS  N I+P 
Sbjct: 593 LLVQGLIKNRTFRLTTTGKYLKRGEVDLTGPEPVHIKTKENLQMMWEKMSKSKHNGIEPE 652

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYD--KDGL--KKRVNADLANGIGNLVSRSVSMIL 370
           E++++ G+D +R +++      +D  +D   D +   +R  + L +        +  +I 
Sbjct: 653 EMVQQYGIDTVRLYILFAAPPEQDILWDVKTDAIPGVQRWQSRLWHL-------ATKLIE 705

Query: 371 KDYDGMIPTPGAFTESDESILSVC----SRVLQEIRENM-QNQLIHRALAQVISLVSEVD 425
               G +P+P    + ++          +  + ++ E   ++ L + A++Q++SL + + 
Sbjct: 706 ARNSGTLPSPQLLNQKEKDEAKRIWKQKNHAVSQVTEYFLEDYLFNAAISQLMSLSNALS 765

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVE---VIRQLAILLQAFVPKLANKIFDIL 477
           +                 +  V+  + E    +  L ++L    P ++++I+  L
Sbjct: 766 Q----------------ASQRVILHSAEYEDALATLCVMLAPMAPHISSEIWKGL 804


>gi|167383568|ref|XP_001736582.1| valyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165900944|gb|EDR27155.1| valyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 1048

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 89/534 (16%), Positives = 170/534 (31%), Gaps = 92/534 (17%)

Query: 36  RFHRLDGLDVLFTTG-------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+ +  G  V             D+    +        VT     +  +   R    +++
Sbjct: 345 RYKKYHGWSVRHPFNGKILPIIEDDELVDMEFGTGCVKVTPAHDPNDYNVAIRHKLKIIN 404

Query: 89  ISYDDFIRTTEKRHHDTC--------RILWKKISDKGDIYKGCYSGWYSLRDEAYYN--D 138
           I  DD   T  +   +           ++ +K+ +KG       S          ++  +
Sbjct: 405 ILNDD--GTMNQECGEFEGMKRFECREVIIEKLKEKGLYKGVKASAMRVPICSRSHDIIE 462

Query: 139 DEVYKGADGQYYNAQHNPVQ----------WMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
             +         +     V+            E E  ++R            +      +
Sbjct: 463 PRIKPQWWVNCKDMAKRAVEAVRKGELKIYPSEMENVWYRWLENIHDWCISRQLWWGHRI 522

Query: 189 PIE--RRNEVISFVKSGLKDLSLSRKTFDW-------------GIKIPDDPQYIMYVWID 233
           P    +  +     +  +K+  ++R   +               I++  DP  ++  W  
Sbjct: 523 PAYLIKNKKEKETNEFDMKNWVVARSEEEAKKKAAEIKGVNIEDIELKQDPD-VLDTWFS 581

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     +  G+ +       K++P +L   G DI+ F    +   +  L   LP  + +F
Sbjct: 582 SGLFPFSVMGWPEKTK-DLEKYFPGELLETGNDIIFFWVARMVMMSLELMNCLPFKEVLF 640

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIE--------------------------------- 318
                  +G K+SKSLGN+IDPI+VIE                                 
Sbjct: 641 HSIVRDAQGRKMSKSLGNIIDPIDVIEGISLQGLNEKLYTYNLPEKECILATEGQKKDFP 700

Query: 319 ----EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
               E G DA+R+ L+  +  G D   D + +      +  N + N    S     KD+ 
Sbjct: 701 NGIEECGTDAMRFALLAYMTQGHDINLDINRVVG--YRNFCNKLWNAFKFSSMNFRKDFK 758

Query: 375 GMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
                    T S  D+ IL   + ++  + +  +N     A   + S       D Y +A
Sbjct: 759 PQEKFEIKKTNSRLDQWILHRLNVMITLVHQWFKNYEFGNATQAIYSFWLYDFCDVYLEA 818

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            K    K  + +R      V   VI     +L  F+P +  +++  L   + N 
Sbjct: 819 SKV-IFKGPDNERRRASEDVLYNVIEIGLRVLHPFMPFITEELWQRLPRRNNNE 871



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 19/165 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +         + H+GHA    I D + R+HR+ G + L+  G D  G      
Sbjct: 119 KSGKKFVMVIPPPNVTGKLHLGHALTNSIQDTIVRYHRMKGDETLWVPGVDHAGIATQVV 178

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + ++  +   +    L  S D    + T +++ 
Sbjct: 179 VEKKLMREQGVTRHDIGREKFLEEVWKWKEEYGKGICNQLRRLGSSLDWSREVFTMDEKR 238

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +  +  + +  +KG +Y+      +    +   +D EV      
Sbjct: 239 GEAVKEAFCRFYEKGLLYREQKLVNWCCTLKTAISDIEVEYIDVC 283


>gi|15605863|ref|NP_213240.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|6226187|sp|O66680|SYLA_AQUAE RecName: Full=Leucyl-tRNA synthetase subunit alpha; AltName:
           Full=Leucine--tRNA ligase subunit alpha; Short=LeuRS
 gi|2983033|gb|AAC06643.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 634

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 6/180 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K Y+     YP+ + H+GH     I D +AR+ ++ G ++L   G D  G     AA
Sbjct: 30  KPNKFYVLEMFPYPSGRIHMGHVRNYTIGDAIARYLKMRGKNILHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N    +    +L  SY  D  I T +  ++   + ++ K+ ++G  Y
Sbjct: 90  IKHGIHPAKWTYENIDYMKKQLKILGFSYDWDREIATCDPEYYKWNQWIFLKMLERGIAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V +G           P+   E   +F R++AY D+LL   
Sbjct: 150 RKTAKVNWCPHDQTVLANEQVIEGK----CWRCGTPIVQKEVPSWFLRITAYADRLLEDL 205


>gi|216263468|ref|ZP_03435463.1| valyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980312|gb|EEC21133.1| valyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 875

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 156/414 (37%), Gaps = 48/414 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + + +    + ++ +  K   +K          ++ +    + ++   G  Y +  
Sbjct: 295 ILTQDGKLNKNVPLQYQGLKMKDARFKIEIELM----EKGFLQGVKKHRQQVGHCYRSG- 349

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             V+      +F  +    DK L   E+      P +  N    +  S ++D  +SR+  
Sbjct: 350 EVVEPYLSTQWFVSMKPLADKALKALENGELRFYPKKWENT-YKYWLSNIRDWCISRQLV 408

Query: 215 DWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
            WG +IP                              DP  ++  W  +     ++ G+ 
Sbjct: 409 -WGHRIPAWYNIDTSELVVSETDPSLDEKNAGKRFVQDPD-VLDTWFSSWLWPFSSLGWP 466

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +  D     ++P +  +   DI+ F    +       +  +P      +      +G+K+
Sbjct: 467 NVTD-DFKNYYPTNTLITAYDIIFFWVSRMVMAGLEFTGQIPFKDVYITPLLRDKQGKKM 525

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+++I E G D+L + L      G+D   D       + A  AN + N  S
Sbjct: 526 SKSLGNGIDPLDIIHEYGSDSLHFTLSFLSVQGQDLNIDSKDFM--LGAKFANKVFN-AS 582

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           + + + +K+    I     F + D+ +L+  +  +  +  +  N   + A   V      
Sbjct: 583 KFILLNIKN--RKILNDLEFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWN 640

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+ 
Sbjct: 641 DFCDWYIEISK-IDLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIYS 693



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           EK  +           H+GHA   ++ D+L R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFER 95

Query: 64  --------NAGVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +    L  SYD      T +       
Sbjct: 96  HLKNIGKSKNDYEREELVQEIFKLKDKHRGVIVNQIKKLGASYDHTRERFTLDDSLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|84515044|ref|ZP_01002407.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511203|gb|EAQ07657.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 843

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +  QN  + R     L +S D      T +  ++   + L+     KG IY
Sbjct: 90  MASGGHPKDWTYQNIADMRAQMKPLGLSIDWTREFATCDPEYYGQQQALFIDFLSKGLIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G   +        V+  E   +FF++S Y ++LL+  
Sbjct: 150 RKKAVVNWDPVDMTVLANEQVIDGKGWRSGAD----VERRELVQWFFKISDYSEELLAAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   ++           GL+
Sbjct: 206 DGLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 115/383 (30%), Gaps = 91/383 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G            L Y  +      P++R          
Sbjct: 423 WGLSRQRYWGCPIPIVHCDTCGAVPEKKENLPIELPYDVTFDVPGNPLDRHPT------- 475

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y             +   A +W   
Sbjct: 476 -----WRDCACPACGAPALRETD-TMDTFVD-SSWYFARFTAPHAPTPTNMDDAAYWMNV 528

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFIL------- 297
           D ++ G +    H +Y      A  ++ +LP            + + +H   L       
Sbjct: 529 DQYIGGIEHAILHLLYSRFFARAMQITGHLPDTAIEPFNALFTQGMVTHEIYLTRDTAGR 588

Query: 298 ---------HKGE-------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                      G+             K+SKS  NV+DP +++ + G D  R+F++ +   
Sbjct: 589 PVYHFPQDVKDGKLADGTVVEVIPSAKMSKSKKNVVDPDDILAQYGADTARWFVLSDSPP 648

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G      AD        V R  S I          P A    D+ +L    
Sbjct: 649 ERDVEWTASG------ADATYKHLARVYRIASEIAA-------APDATGTGDDDLLRAMH 695

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R + ++   ++    + A+A++ +  +             L K+    A+      V   
Sbjct: 696 RCIHDVTMGLETFGFNAAIAKLYAFTN------------TLGKSTAAAATKRQAALV--- 740

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             LA L+    P LA  I+  L 
Sbjct: 741 --LAQLMSPMTPHLAEDIWASLG 761


>gi|226320397|ref|ZP_03795965.1| valyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226234206|gb|EEH32919.1| valyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 875

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTIFGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNSENIDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFSEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|251797858|ref|YP_003012589.1| isoleucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545484|gb|ACT02503.1| isoleucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 1029

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 116/298 (38%), Gaps = 17/298 (5%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           +      ++ VW D+ +       +        A+ +PAD+   G D     F ++   +
Sbjct: 505 VMTRTSEVIDVWFDSGSMPFAQQHHPFENAEEFAEQYPADMICEGIDQTRGWFFSLLAVS 564

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L +   P    + +   +   G+K+SKS GNVIDP E+I E G DA R+ L+ + A   
Sbjct: 565 TLYNGKAPYKAVISTGHILDENGQKMSKSKGNVIDPWEIINEYGTDAFRWALLADSAPWN 624

Query: 338 DGFYDKDGLKKRVNADLANGIGN-LVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCS 395
              +   G+     + + + I N     ++   +  ++        + ++ D  I+S  +
Sbjct: 625 SKRFS-RGIVGEAKSKVIDTIVNTHAFYALYASIDGFNPADHEERSSASKLDRWIVSRLN 683

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++ + + ++          +   V E+ + Y    +         +           V
Sbjct: 684 SLIKTVVKGLEVNDFLNPAKTIEVFVDELSNWYIRRSRDRFWGSGLTEDKVAAYQTLRHV 743

Query: 455 IRQLAILLQAFVPKLANKIFDILF-----------VADENRCFQSLDQRLKPGFMLHK 501
           +  L+ ++  + P LA  ++  L            VADE+   ++L++ +     + +
Sbjct: 744 LLTLSRVIAPYAPLLAEDVYGNLGGESSVHLADYPVADESAIDETLERDMDSAKQIVE 801



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +            N  PHIGH    +I D + R+  + G  V+   G D HG  +    
Sbjct: 36  GKPNYVFYEGPPTANGAPHIGHVLGRVIKDFIGRYKTMSGYRVVRKAGWDTHGLPVELGV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K  V    + +R++ + +      D+   T +  + 
Sbjct: 96  EKQLGISGKQEIEKYGVEEFIKKCKDSVFVYEKQWRELTEAIAYWTDLDNPYITLKNEYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   +   I  KG +Y+G     Y    +   +  EV +G +
Sbjct: 156 ESVWHILSTIHGKGLLYRGHRVSPYCPCCQTTLSSHEVAQGYE 198


>gi|326404441|ref|YP_004284523.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051303|dbj|BAJ81641.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 864

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+AR  R  G DVL   G D  G     AA
Sbjct: 39  GRRKCYVLEMFPYPSGKIHMGHVRNYAIGDVIARARRAQGYDVLHPMGWDAFGLPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   V    +   N    +     + +S D      T +  ++   + L+  +   G  Y
Sbjct: 99  RERNVDPAKWTRDNIAAMKADLKRVGLSVDWSREFATCDPEYYGHQQKLFLDLWRAGLAY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D     +++V  G           PV+  +   +FFR++ +   LL+  
Sbjct: 159 RRESAVNWDPVDMTVLANEQVIDG----RGWKSGAPVEKRKLRQWFFRITDFAADLLAGL 214

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +            G
Sbjct: 215 DTLENWPERVRTMQRNWIGRSEG 237



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 101/383 (26%), Gaps = 78/383 (20%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
             N      G   Q       P+   E  G                       LP +R  
Sbjct: 424 VVNWRLRDWGVSRQRAWGCPIPMIHCEVCGTV-------PVPEKDLPVRLPDDLPFDRPG 476

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-- 252
             +                   G     +       ++D  + Y         P  +   
Sbjct: 477 NALDH-----HPSWKHVACPQCGAAAQRETD-TFDTFVD-SSWYFARFCAPHAPVPADPA 529

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLL------------------------------ 280
             + + P D ++ G +    H +Y   F                                
Sbjct: 530 ATSHWMPVDHYIGGIEHAILHLLYARFFTRAMHRLGQVGVAEPFAGLFTQGMLTHESYRT 589

Query: 281 -SANLPLPKKVFSH--GFILHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFL 329
                  P++V  H        G K        +SKS  N +DP  VI   G D  R+F+
Sbjct: 590 EDGKWLYPEEVIRHADHATTLDGRKVIVGPIEKMSKSKRNTVDPSAVIARFGADTARWFV 649

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           + +    +D  + + G +       A      + R    +  D    +    A  E+   
Sbjct: 650 LSDNPPERDVEWTEAGAQG------AFRYVQRLYRLARSVAADRADDVALERAEGEA-RK 702

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     R +  + E +     + A+A++  L +             + +T    A  +  
Sbjct: 703 LRQATHRTIAAVTEAIDGFAFNVAIARLYELANA------------IAETEGRDAPGLPA 750

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
              E +  L  L    +P +A +
Sbjct: 751 ARREAMSALIRLAAPIIPHVAEE 773


>gi|148261042|ref|YP_001235169.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|189082979|sp|A5G068|SYL_ACICJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146402723|gb|ABQ31250.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 864

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     I DV+AR  R  G DVL   G D  G     AA
Sbjct: 39  GRRKCYVLEMFPYPSGKIHMGHVRNYAIGDVIARARRAQGYDVLHPMGWDAFGLPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   V    +   N    +     + +S D      T +  ++   + L+  +   G  Y
Sbjct: 99  RERNVDPAKWTRDNIAAMKADLKRVGLSVDWSREFATCDPEYYGHQQKLFLDLWRAGLAY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D     +++V  G           PV+  +   +FFR++ +   LL+  
Sbjct: 159 RRESAVNWDPVDMTVLANEQVIDG----RGWKSGAPVEKRKLRQWFFRITDFAADLLAGL 214

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +            G
Sbjct: 215 DTLENWPERVRTMQRNWIGRSEG 237



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 101/383 (26%), Gaps = 78/383 (20%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
             N      G   Q       P+   E  G                       LP +R  
Sbjct: 424 VVNWRLRDWGVSRQRAWGCPIPMIHCEVCGTV-------PVPEKDLPVRLPDDLPFDRPG 476

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-- 252
             +                   G     +       ++D  + Y         P  +   
Sbjct: 477 NALDH-----HPSWKHVACPQCGAAAQRETD-TFDTFVD-SSWYFARFCAPHAPVPADPA 529

Query: 253 --AKFWPADLHVIGKDILRFHAIYWPAFLL------------------------------ 280
             + + P D ++ G +    H +Y   F                                
Sbjct: 530 ATSHWMPVDHYIGGIEHAILHLLYARFFTRAMHRLGQVGVAEPFAGLFTQGMLTHESYRT 589

Query: 281 -SANLPLPKKVFSH--GFILHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFL 329
                  P++V  H        G K        +SKS  N +DP  VI   G D  R+F+
Sbjct: 590 EDGKWLYPEEVIRHADHATTLDGRKVIVGPIEKMSKSKRNTVDPSAVIARFGADTARWFV 649

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           + +    +D  + + G +       A      + R    +  D    +    A  E+   
Sbjct: 650 LSDNPPERDVEWTEAGAQG------AFRYVQRLYRLARSVAADRADDVALERAEGEA-RK 702

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     R +  + E +     + A+A++  L +             + +T    A  +  
Sbjct: 703 LRQATHRTIAAVTEAIDGFAFNVAIARLYELANA------------IAETEGRDAPGLPA 750

Query: 450 VTVEVIRQLAILLQAFVPKLANK 472
              E +  L  L    +P +A +
Sbjct: 751 ARREAMSALIRLAAPIIPHVAEE 773


>gi|223648004|gb|ACN10760.1| Probable leucyl-tRNA synthetase, mitochondrial precursor [Salmo
           salar]
          Length = 912

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R+K Y+ +   YP+ + H+GH     I+D +  F R+ G  VL   G D  G     A
Sbjct: 87  SRRKKFYVLSMFPYPSGRLHMGHVRVYTISDTIGHFQRMRGHQVLNPMGWDAFGLPAENA 146

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +   N ++ R+  D L + +  D  + T    ++   + L+ K+ + G  
Sbjct: 147 AIERGLDPEEWTKSNIQSMREQLDSLGLCFNWDKEVTTCLPDYYRWTQWLFVKLFNAGLA 206

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    D++V    D          V+      +F + + Y   LL  
Sbjct: 207 YQKEAVVNWDPVDQTVLADEQV---DDSGCSWRSGALVEQKLLRQWFIKTTNYAKPLLDA 263

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 264 LAELPEWYGVKAMQANWIGDC 284



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 110/332 (33%), Gaps = 29/332 (8%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           +P++  ++                                      +    + SL+    
Sbjct: 501 SPLEHADDWISCTCPRCKGPARRETDTMDTFVDSSWYYFRYTDPHNQDRPFERSLADHWL 560

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
              + I      +M+++     ++      L        K     L             Y
Sbjct: 561 PVDVYIGGKEHAVMHLYYARFLSHFCRDQGLVGHREPFKKLLVQGLIKGQTFRAADSGQY 620

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +      P +V S   +    EK+SKS  N +DP EV+++ G+D +R +++    
Sbjct: 621 LKRDDIDFTGEKPVQVGSKAGLQVTWEKMSKSKHNGLDPQEVVQQYGIDTVRLYVLYAAP 680

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAF---TESD 387
             +D  +D          D   G+    SR   ++ K      DG +P P       ++D
Sbjct: 681 PEQDILWDVK-------TDALPGVLRWQSRLWGLVTKLRSARQDGDVPNPSLLKRKEQAD 733

Query: 388 -ESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
              I    +  ++++  +  ++ L++ A+++++ L +             L   + D   
Sbjct: 734 ARKIWENKNFAVEQVTGHFTEDFLLNAAISRLMGLTN------------TLSNVSSDVLQ 781

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +    E +  L ++     P LA++++  L
Sbjct: 782 HSVEF-EEALATLCVMTAPMAPHLASELWAGL 812


>gi|330814064|ref|YP_004358303.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487159|gb|AEA81564.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 884

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 128/368 (34%), Gaps = 51/368 (13%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
            Y +  ++ V+    E +F        + +S  +       P    ++        ++  
Sbjct: 344 PYGDRSNSIVEPYLTEQWFLNAKVLSKEAISNVKKKETSFFPSSW-SKTYFQWMDNIQPW 402

Query: 208 SLSRKTFDWG--IKIPDDPQY------------------------------IMYVWIDAL 235
            +SR+   WG  I +   P                                ++  W  + 
Sbjct: 403 CISRQ-LWWGHQIPVWYAPNGEVFVANNKKEAEKLAKKKFKNKVSLKQDEDVLDTWFSSA 461

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGF 295
                T G+       K +F+   + V G DI+ F    W A ++  +L   KKV     
Sbjct: 462 LWSFATFGWPKKTYELK-RFYSTSVLVTGFDIIFF----WVARMMMMSLYFMKKVPFSNV 516

Query: 296 ILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
            +H      KG+K+SKS GNVIDPI +I E G DALR+ L+   + G+D    KD +   
Sbjct: 517 YVHALVRDDKGQKMSKSKGNVIDPIVLINEYGADALRFTLIAMSSPGRDVKLAKDRVNGY 576

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N      + N+ + S           I         +  IL+  +    +  + ++   
Sbjct: 577 KN--FVTKVWNIFNFS-KFNKTFTKPKINIKKINHPLNLWILNEFALCKIKTNDCIEAYR 633

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              A   V   V     D Y +  KP  L   +      +      +  ++ +LL  F P
Sbjct: 634 FDEAAKHVYQFVWNFFCDWYIEFSKP-ILYSDDKKNIKELKDTMTFLQSEILLLLHPFTP 692

Query: 468 KLANKIFD 475
            +  +++ 
Sbjct: 693 FVTEELWS 700



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 26/137 (18%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I           H+GHA    I D+L RF R  G + L+  GTD  G       +   
Sbjct: 38  FSIVIPPPNVTGSLHMGHALNNTIQDLLIRFKRNQGYETLWQPGTDHAGIATQMVVEKQL 97

Query: 65  --AGVTTKVFVDQNSRNFRDMADV------------------LDISYDDFIRTTEKRHHD 104
             AG T +    +N    +++                      D S + F  T +K   +
Sbjct: 98  ALAGKTRQQLGRKNF--IKEIWKWKAKSGNEIVSQLKKLGSSCDWSKERF--TMDKGLSE 153

Query: 105 TCRILWKKISDKGDIYK 121
               ++  +  K  IYK
Sbjct: 154 AVTKVFVDLYKKKLIYK 170


>gi|313901901|ref|ZP_07835320.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467842|gb|EFR63337.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 939

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 100/264 (37%), Gaps = 17/264 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   WPADL++ G D     F +    A 
Sbjct: 519 FRKETDIMDVWFDSGSSHAAVLE------TREDLTWPADLYLEGSDQHRGWFQSSLLTAV 572

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G K+SKSLGNV+DP +VI   G D LR + V       D
Sbjct: 573 ATRGRAPYRAVLTHGFVVDGEGRKMSKSLGNVVDPNDVIRRYGADVLRLWAVSSDY-RGD 631

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
               +D LK+   A++   I N + R +   L D+D        G   E D   L+  ++
Sbjct: 632 VRISEDILKQ--MAEVYRKIRNTL-RFLLANLGDFDPARDAVPYGELGELDRWALARLAQ 688

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD-RASTVLYVTVE 453
           V + +R   +    H     V +         Y D  K         D R      V  +
Sbjct: 689 VTERVRRAYEEYQYHLVYHAVHNFCVTDLSAFYLDVLKDRLYASLPADPRRRAAQTVLYQ 748

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           + R L +LL   +   A +++  L
Sbjct: 749 LARHLTLLLAPVLCHTAEEVWGHL 772



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 15/168 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA--- 61
            +  +     Y N   H+G A   I+ DV+ R   + G D  +  G D HG  I +    
Sbjct: 48  PRFVLHDGPPYANGDIHVGTALNKILKDVVVRHASMAGYDAPYVPGWDTHGLPIERRALE 107

Query: 62  ----------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             + +        R     L +   ++    T E  +      +
Sbjct: 108 VLGVDRRAISPVELRNRCRDYALDQMNRQRQQFRRLGVLGDWERPYLTLEPEYEAKQIEV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + +++ +G IY+  YS ++   DE    + E+              PV
Sbjct: 168 FGEMARRGYIYRNLYSVYWCPVDETALAEAEIEYREKTSPSIYVAFPV 215


>gi|288931973|ref|YP_003436033.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894221|gb|ADC65758.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 1023

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/383 (18%), Positives = 130/383 (33%), Gaps = 22/383 (5%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW----------- 159
             +   G  ++      Y   ++ +    E+ +    +    +  P +W           
Sbjct: 384 TIVHRYGHCWRCKTPIIYRATEQWFLKVSELKEEMLREIDKVRWIP-EWAGASRFKDWVS 442

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             ++    R   +   +  +       +  +   NEV       L    +   TF+    
Sbjct: 443 NAKDWCISRQRYWGIPIPVWICEKCGKMKVVGSINEVGWKDDLDLHRPKIDEVTFECDCG 502

Query: 220 IPDDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                   +  VW D+      T  Y    +    K WPAD    G D     F++    
Sbjct: 503 GKMKRISDVFDVWFDSGVASWGTLEYPLKEE-EFKKLWPADFITEGHDQTRGWFYSQLGA 561

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + +     P    +     +  +G K+SKSLGNV++P EVI+ +GVDA R +++   A  
Sbjct: 562 SIIAFGKAPYKTVLMHGFTLDEQGRKMSKSLGNVVEPEEVIDRIGVDAFRLYVLSS-ALW 620

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D  +     +      L N   N V  +   M L  +  + P        D+ ILS   
Sbjct: 621 EDLKFSWG--EAENFLRLLNIFWNAVRFAYTYMELDKFREVSPEDCELRIEDKWILSRLE 678

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +   E M+N  +HR + +    V       Y    +    ++ +             
Sbjct: 679 SFCKLANEAMENYNLHRVVKRFYDFVVEDFSRWYIQLIRRRVWEEKDSPSKIAAYATMFR 738

Query: 454 VIRQLAILLQAFVPKLANKIFDI 476
           VI ++  ++  F P +A  ++  
Sbjct: 739 VIDKVTRIISPFAPFIAEYVYQN 761



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 54/172 (31%), Gaps = 19/172 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  +      Y   + H+G A+  +I D + R+ R+ G  V    G D HG  I    + 
Sbjct: 35  KPFFFVDGPPYTTGRIHLGTAWNKVIKDTVLRYKRMKGFKVTDRPGWDMHGLPIEVKVEQ 94

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                   +  +N     +    L +   +++   T +  + ++
Sbjct: 95  ELGIKEKKEIEEFGIDKFVKMCMDYALKNKEAMTEQFKALGVWMDWENPYMTIKAEYINS 154

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                KK  +KG + K      +  R E    D EV              PV
Sbjct: 155 AWWTVKKAHEKGLLEKKKMVVNWCPRCETALADAEVEYAERKDPSIYVKFPV 206


>gi|325201468|gb|ADY96922.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 876

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 490 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 546

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 547 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 602

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R  +    A  L         V S        EK+SKS  N +DP E+I
Sbjct: 603 ADVELTFDDKGRPISAVLKADGLP-------VVISGT------EKMSKSKNNGVDPQELI 649

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 650 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 703

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 704 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 756

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 757 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 810


>gi|50086110|ref|YP_047620.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|60390694|sp|Q6F817|SYL_ACIAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49532086|emb|CAG69798.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 873

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L   I +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSIDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLKDGWPQQVLTMQRNWIGRSTGM 236



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
            V R  +  L+      P     ++  + +       +Q++ ++++ +   + A+A ++ 
Sbjct: 689 RVWRLATGFLEKGYAQAPIAAELSKDAQDLRRKTHETIQKVGDDIERRHAFNTAIAALME 748

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L++   ++                  T     V  E I  L  LL  F P L+  +    
Sbjct: 749 LLNATSKF---------------EVQTADDAAVAREAIETLLTLLAPFAPHLSQTLLAEF 793

Query: 478 FVADENRCFQSLDQ 491
            +      F S+D+
Sbjct: 794 GIDLIAAQFPSVDE 807


>gi|296445331|ref|ZP_06887289.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257092|gb|EFH04161.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 871

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 31  QKPKYYVLEMFPYPSGRIHVGHVRNYSMGDVIARYKRAKGFDVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           Q +G     +   N  + R     + +S D    I T +  ++   + L+      G + 
Sbjct: 91  QQSGSHPAKWTYANIASMRTQLKSMGLSLDWSREIATCDPAYYKHQQKLFLDFLAHGLVD 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +F R+  Y D LL   
Sbjct: 151 RKQSKVNWDPVDMTVLANEQVVDG----RGWRSGALVEQRELTQWFLRIGKYADDLLGSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++   +   +            GL
Sbjct: 207 DTLERWPEKVRLMQRNWIGRSEGL 230



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 20/184 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R F++ +    +D  + ++G++         G   
Sbjct: 624 EKMSKSKRNTVDPDDIIASYGADTARLFVLSDSPPDRDVVWSEEGVQ---------GASR 674

Query: 361 LVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            V R   +  +  +   P     P  F  +   I     R +  + +N++    + A+A+
Sbjct: 675 FVHRVWRLAGELANVAAPLGARAPAEFGAAALDIRKATHRAIAAVGDNIERLRFNTAIAR 734

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +    +E+    D  +   +          + +   E    LA+L+    P +A + +  
Sbjct: 735 IREFANELTSALDKIEATPVADD-------LAFAFREAAETLALLIAPMTPHVAEECWRD 787

Query: 477 LFVA 480
           L  A
Sbjct: 788 LGHA 791


>gi|109730205|gb|AAI12413.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     AA 
Sbjct: 80  KPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAI 139

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  Y+
Sbjct: 140 ERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 199

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    +          V+      +F + +AY   +     
Sbjct: 200 KEALVNWDPVDQTVLANEQV---NEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALA 256

Query: 182 SHPEFILPIERRNEVISFV 200
             PE+      +   I   
Sbjct: 257 DLPEWYGIKGMQAHWIGDC 275



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 107/329 (32%), Gaps = 63/329 (19%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV 262
           L+ ++ S        K   D              Y            + A FW P DL++
Sbjct: 498 LEWVNCSCPRCKGSAKRETDTMDTFVDSAWYYFRYTDPHNTQSPFGSALADFWMPVDLYI 557

Query: 263 IGKDILRFHAIYWPAFLLSAN--------LPLPK------------KVFSHGFILHK--- 299
            GK+    H  Y        +         P  K            ++ S   +  +   
Sbjct: 558 GGKEHAVMHLFYARFLSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQCLKKEDID 617

Query: 300 ------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                              EK+SKS  N +DP E++ + G+D +R +++      KD  +
Sbjct: 618 FTGPAPVCAKTKEKLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILW 677

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE----SILSVCSRV 397
           D   +K      +      L S +   I     G +P P      ++    ++    + V
Sbjct: 678 D---VKTDALPGVLRWQQRLWSLTTRFIEARTSGTVPQPQLLNSKEKTKAQNLWEYKNAV 734

Query: 398 LQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++  +  ++  ++  ++Q++ L S +     A +   L     + A          + 
Sbjct: 735 IAQVTTHFTEDFALNSVVSQLMGLSSALS---QASQRVVLHSPEFEDA----------LC 781

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++++  L +     C
Sbjct: 782 ALLVMAAPLAPHVTSELWAGLTLVPSKLC 810


>gi|49476194|ref|YP_034235.1| leucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|60390696|sp|Q6G1W2|SYL_BARHE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49239002|emb|CAF28302.1| Leucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 880

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 39  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  QN    R     L +S D      T +  ++   ++L+     KG + +
Sbjct: 99  QNKVHPKTWTYQNIAVMRGQLKQLGLSVDWSREFATCDVDYYHRQQMLFLDFYQKGLVAR 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E   +FF++S + + LL+  E
Sbjct: 159 KVAKVNWDPVDQTVLANEQVVDG----RGWRSGALVEQRELTQWFFKISDFSEDLLAGLE 214

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
              ++   +    +       GL    
Sbjct: 215 ELEQWPEKVRIMQKNWIGKSQGLLIRW 241



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 18/179 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I   G D +R+F++ +    +D  + + G++          +  
Sbjct: 637 EKMSKSKKNVVDPDDIIASYGADTVRWFILSDSPPERDVIWTESGVEGAHR--FVQRVWR 694

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V+ S  ++      +     A   S      V  R L  + ++++    +RA+A++   
Sbjct: 695 CVALSAPVLRDVVPCVGKQGAALQLS-----KVAHRTLYAVEDDLEKFAFNRAIARLYEF 749

Query: 421 VSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   +   P   +  N  D          + +     ++   +P LA +    L 
Sbjct: 750 -------LNIMAPLLNRIENVEDEMKAA---LRQAMDFFLAMIAPIMPHLAEECHAALG 798


>gi|86136917|ref|ZP_01055495.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85826241|gb|EAQ46438.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 855

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  GKEKYYVLEMFPYPSGKLHMGHVRNYTMGDVVARYKMSTGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N    ++    L +S D      T ++ ++   + L+    DKG +Y
Sbjct: 90  MASGGHPKDWTYANIAAMKEQMKPLGLSLDWSREFATCDEDYYGQQQALFLDFLDKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y + LLS  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVEAG----RGWRSGALVERRELTQWFFKISDYSEDLLSAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           E   ++   +    E       GL+
Sbjct: 206 EGLHDWPAKVRLMQENWIGKSRGLQ 230



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 114/382 (29%), Gaps = 82/382 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G            L Y E        +       + +  
Sbjct: 424 WGLSRQRYWGCPIPVVHCEDCGVVPEKKENLPIALPYDEDGKPIDFSVPG-----NPLDR 478

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                + +        +   D            + +                +   D ++
Sbjct: 479 HPSWRNCACPACGKPAQRETDTMDTFVDSSWYFSRFTAPHAKTPTILPEAEYWMNVDQYI 538

Query: 263 IGKDILRFHAIYWP----AFLLSANLP----------LPKKVFSHGFI------------ 296
            G +    H +Y      A  +  +LP            + + +H               
Sbjct: 539 GGVEHAILHLLYARFFSRAMKICGHLPDGCEEPFDALFTQGMVTHAIYQSTDDTGRPVYH 598

Query: 297 ------LHKGE----------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                 L  G+                K+SKS  NV++P+ +I   G D  R+F++ +  
Sbjct: 599 YPEEIELRDGKAFLKDSGAEVKTIPSAKMSKSKNNVVNPLSIISSYGADTARWFVLSDSP 658

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +   G +              ++R  ++  K        PGA  + DE +L   
Sbjct: 659 PERDVEWTASGAEAA---------YKHLNRVWNLCDK---IGQMEPGATGQGDEELLREM 706

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++   +++   + ++A++    +             L K+   +A+       + 
Sbjct: 707 HKTIRDVTLGVESFGFNASIARLYGFTN------------TLAKSKAGQAAQ-----KQA 749

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           I  LA L+   VP LA  I+  
Sbjct: 750 IMTLAQLMSPMVPHLAEDIWAH 771


>gi|325298094|ref|YP_004258011.1| Valyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317647|gb|ADY35538.1| Valyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 875

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 133/382 (34%), Gaps = 59/382 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    +      P + +N         +KD  +SR+   
Sbjct: 351 PIEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRNWLENIKDWCISRQ-LW 408

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 409 WGHRIPAYYLPQGGYVVAETPEEALKLAQEKTGNAALTISDLRQDEDCLDTWFSSWLWPI 468

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    + +PD  +   ++P    V G DI+ F    +    +    ++P     F+    
Sbjct: 469 SLFNGILDPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYKHDMPFRNVYFTGIVR 528

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++    +  N
Sbjct: 529 DKIGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLSAPAGNDILFDDALCEQ--GRNFNN 586

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N         + D +     P     + E   ++ ++   E+ +      +  AL  
Sbjct: 587 KIWNAFRLVKGWNVADIEQ----PEYARIATEWFKAMLTKTTLEVTDLFGKYRLSEALMA 642

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANK 472
           V  L      ++D    W L+   P     +   T E        L + L  F+P +  +
Sbjct: 643 VYKL------FWDEFSSWYLEMVKPAYGQPIDRTTYEQTLKFFEALLMQLHPFMPFITEE 696

Query: 473 IFDILF--VADENRCFQSLDQR 492
           ++  ++     E+   Q LD+ 
Sbjct: 697 LWQHIYDRQPGESIMTQQLDKA 718



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMTGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T ++    
Sbjct: 92  VNKLAQEGIKKTDLTRDEFLKHAWAWTDEHGGIILKQLRKLGASCDWDRTAFTMDETRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIRVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYKVEGDSEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|225010216|ref|ZP_03700688.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005695|gb|EEG43645.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 1134

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 97/264 (36%), Gaps = 12/264 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                 ++ VW D+ +       Y         + K +PAD    G D     F+ ++  
Sbjct: 596 MHRESDLIDVWFDSGSMPYAQWHYPFENKELIDENKAFPADFIAEGVDQTRGWFYTLHAI 655

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A ++         V +   +   G+K+SK LGN IDP E I   G DA R++++      
Sbjct: 656 ATMVFDRPAYKNVVSNGMVLDKDGKKMSKRLGNAIDPFETIAAHGADATRWYMIANANPW 715

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            +  +D +G+ +                S+   L  +D   P        E D  +LS  
Sbjct: 716 DNLKFDTEGIVEVKRKFFGTLYNTYSFFSLYANLDHFDNSAPQIPLADRPEIDRWVLSEL 775

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYV 450
           + ++  +    +     +A   +   V E   + Y     ++ W+  +  PD+ +     
Sbjct: 776 NSLIIRVEAAYETYEPTKAARAISDFVQENLSNWYVRLCRRRFWK-GEYGPDKIAA-YQT 833

Query: 451 TVEVIRQLAILLQAFVPKLANKIF 474
             E +  ++ L     P   ++++
Sbjct: 834 LYECLLVVSKLSAPIAPFFMDRLY 857



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P I HA    I D+  R+  + G  V    G D HG  I   
Sbjct: 36  EGQPSYVFFEGPPSANGMPGIHHAMARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPIELG 95

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK  +                  + +  + DM D +   +  ++   T E ++
Sbjct: 96  VEKALGITKEDIGTKISVEDYNKACRAAVMRYTDVWNDMTDKIGYWVDMENPYITYEPKY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            ++   L K+I  KG IYKG     YS +
Sbjct: 156 MESVWWLLKEIYKKGLIYKGYTIQPYSPK 184


>gi|166713428|ref|ZP_02244635.1| valyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 1004

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 109/315 (34%), Gaps = 57/315 (18%)

Query: 227 IMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           ++  W  +     +T G+ D     +   A++ P+ + V G DI+ F    +       +
Sbjct: 530 VLETWFSSQLWPFSTLGWPDANAQIERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFT 589

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--------------------- 320
             +P      +      +G+K+SKS GNV+DP+++I+ +                     
Sbjct: 590 GQVPFRDVYITGLIRDAQGQKMSKSKGNVLDPLDIIDGISIEALVAKRTTGLMKPKDAPK 649

Query: 321 ----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                           G DALR+ +      G+D  +D         A+      N +  
Sbjct: 650 IEKATRKEFPDGIIAHGADALRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWN 703

Query: 365 SVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +   +L + +       P   TE+++ IL+    V  E   +  +         +     
Sbjct: 704 ATRFVLMNTESARFAGVPQPRTEAEKWILARLDEVTAETHAHYADYRFDLLAQSLYEFAW 763

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI---- 476
               D + +  KP  L   + D A++  +  + V+  L  LL    P +  +++      
Sbjct: 764 NAFCDWFVELAKP-ALNNQDADAAASTRHTLLYVLESLLRLLHPLTPFVTEELWQQVAPR 822

Query: 477 LFVADENRCFQSLDQ 491
           L +       Q   Q
Sbjct: 823 LGITTATISLQRFPQ 837



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGKGETRDSLGRDGFIAKVWEWKAASGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|17230775|ref|NP_487323.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|48428560|sp|Q8YS09|SYL_ANASP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17132378|dbj|BAB74982.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 872

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  SNKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    R     L   I +D  + T    ++   + ++ +    G  
Sbjct: 90  AIDRGVPPAKWTYQNITQMRQQLQRLGLSIDWDSEVATCSPDYYKWTQWIFLQFLQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    +          V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV---DNEGRSWRSGAIVERKLLRQWFLKITDYAEELLND 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          SG
Sbjct: 207 LDKLTGWPERVKLMQANWIGKSSG 230



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 115/337 (34%), Gaps = 81/337 (24%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT----GYLDNPDGSKAKFW-PADLHV 262
            ++      G     +    M  +ID  + Y              + +K   W P D +V
Sbjct: 494 WVNVPCPTCGTPAKRETD-TMDTFID-SSWYFLRFTDARNEAQVFESAKTNDWMPVDQYV 551

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPL----------------------PKKVFS 292
            G +    H +Y   F         L+ + P                        K V S
Sbjct: 552 GGIEHAILHLLYSRFFTKVLRDRGLLNFDEPFERLLTQGMVQGLTYFNPNKGGKDKWVPS 611

Query: 293 HGFILHKGEK-------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           H    +                 +SKS GN + P +VI + GVD  R F++ +    KD 
Sbjct: 612 HLVNPNDPRDPQTGEPLQRLYATMSKSKGNGVAPEDVIAKYGVDTARMFILFKAPPEKDL 671

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
            +D+  ++         G    ++R   ++              G  ++S++ +      
Sbjct: 672 EWDEADVE---------GQFRFLNRVWRLVTDYVASGVNPKNKSGELSKSEKDLRRAIHT 722

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +Q + E++++    + A+++++ L + +                 D       V  E I
Sbjct: 723 AIQSVTEDLEDDYQFNTAISELMKLSNAL----------------TDANGKDSRVYAEGI 766

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
           + L +LL  F P +A +++ +L  ++    + + + D
Sbjct: 767 KTLVVLLAPFAPHIAEELWRLLGNSESVHTQTWPAFD 803


>gi|187930051|ref|YP_001900538.1| leucyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691821|sp|B2UCA1|SYL_RALPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187726941|gb|ACD28106.1| leucyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 877

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+  ++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLGITKYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +           +   I   +
Sbjct: 212 LDPLGWPERVKLMQQNWIGKSE 233



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 118/357 (33%), Gaps = 40/357 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  + N      G   +      +   +++   Y+ R +    + +     + 
Sbjct: 479 TGNPLAKDPRFLNCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDGETMVD-ARND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    PAD+ V   +             + A L    +    G +    EK+S
Sbjct: 592 REDASGKKQWINPADVDVQTDE---------RGRPVGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   ++  G++    +     + N    
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWNDAGVEGA--SRFLRRLWNFG-- 694

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            V                 T++D ++      VL++   + +    +  ++  + +++ +
Sbjct: 695 VVHGDAIRGGHGNGVVAGATDADRALRRELYTVLKQANYDYERLQYNTVVSATMKMLNAL 754

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                     E  K     A        E +  L  +L   VP + + ++  L  A 
Sbjct: 755 ----------EGAKDAGADAR------REGLGLLLRVLYPVVPHITHVLWTELGYAG 795


>gi|90421808|ref|YP_530178.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|122995674|sp|Q21CM7|SYL_RHOPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90103822|gb|ABD85859.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 882

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 73/203 (35%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G + +
Sbjct: 93  ANKVHPKSWTYANIATMKAQLKSMGLSLDWSREFATCDPSYYKHQQRMFIDFLAAGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S Y + LL+  +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISKYSEDLLTALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
               +   +            GL
Sbjct: 209 RLDRWPDKVRIMQRNWIGRSEGL 231



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 12/195 (6%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + +DG+K    +     +  
Sbjct: 633 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEDGVKGA--SRFVQRVWR 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LVS   +M  +          A   + +++     R L EI   +     + A+A++   
Sbjct: 691 LVS---AMAPQLPAPGTRLDAANHPAAQALRVAAHRTLSEILAGIDRLRFNTAVAKLYVY 747

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V E++    A  P      +P  A+       E I  L +L+   +P LA + +  +  +
Sbjct: 748 VGELEAVL-ANAPQGGLGGDPVLAAAAR----EAIDILVLLIAPMMPHLAEECWAAIGHS 802

Query: 481 D--ENRCFQSLDQRL 493
                  +  ++  L
Sbjct: 803 GLVSEARWPEIETAL 817


>gi|320160476|ref|YP_004173700.1| leucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994329|dbj|BAJ63100.1| leucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 818

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 13/230 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  T + YP+   HIGH Y M  +D  ARF R+ G +VLF  G D  G     AA
Sbjct: 35  NKPKHYALTMLPYPSGNLHIGHWYAMTPSDARARFMRMRGYNVLFPMGFDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K +  QN  N R     +   +D      +++  ++   +  + +    G  Y
Sbjct: 95  IKRNIHPKEWTYQNIDNMRRQLKSMGAMFDWRREAISSDPEYYRWTQWFFIQFYKHGLAY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +          ++V+   + ++      PV     E +FF+ + Y ++LL Y 
Sbjct: 155 RKMSPVDWCPTCNTTLAREQVW--GEDRHCERCGTPVIKKNLEQWFFKTTQYAEELLRYE 212

Query: 181 ESHPEFILPIERRNE---------VISFVKSGLKDLSLSRKTFDWGIKIP 221
                  +   + N          + S  +    ++  +R    WG+   
Sbjct: 213 GMDWPEKVREMQINWIGKSEGASVIFSTEQGDPLEVFTTRPDTLWGVTFM 262



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 105/317 (33%), Gaps = 39/317 (12%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYL 245
           LP +            L            G K     D              YL+     
Sbjct: 461 LPDDVEWRPTGESPLKLHPTWRFTTCPSCGGKAERETDTMDTFMCSSWYHLRYLSPHYDK 520

Query: 246 DNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFI 296
              D  +  +W P D +  G +    H IY   F            N P+ +       +
Sbjct: 521 GPFDPKEYDYWMPVDTYTGGAEHATMHLIYTRFFHKACRDIGITKGNEPMIQLRNQGQIL 580

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G+++SKS GNV+DP E +   G D +R FL+      + G +  + ++         
Sbjct: 581 GPDGQRMSKSRGNVVDPDEQVRMYGADTVRAFLMFGYRWAEGGPWGTENIQ--------- 631

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G+   + R  S  L + DG       F    + +     + L+ +  + +    +  ++ 
Sbjct: 632 GVNRWLRRVWSFFLDEADGGKADEATF----KRLRRKVHQTLRSVTRDFEEFEFNTIVSA 687

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L +E+ R           K N    + V     E +     +L    P +A +++  
Sbjct: 688 LMELANEMSR----------AKQNGAFGTPVWD---EAVEIYLKMLAPVAPHIAEELWAQ 734

Query: 477 LF--VADENRCFQSLDQ 491
           L    +   + +  +D+
Sbjct: 735 LGKPYSIHQQSWPLVDE 751


>gi|90101538|sp|Q6YRJ6|SYV_ONYPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 882

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 148/387 (38%), Gaps = 34/387 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D +        +L+ + ++   E +    G Y +     ++      +  +  A  
Sbjct: 319 YQGLDRFVCRQKLVQTLKQKGFFTKTENHLHKVG-YSSISDAIIEPRLSLQWVLKTKAIA 377

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              L   + +        R   + +     ++D  +SR+   WG +IP            
Sbjct: 378 QIALKTNKINFF----PLRFENIFNNWLQNIEDWCISRQ-LWWGHQIPAWHKGQEIKVQI 432

Query: 222 --DDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA-- 272
               P++     ++  W  +     +T G+ +         +P D+ V G DIL F    
Sbjct: 433 ESPGPEWSLDCDVLDTWFSSALWPFSTLGWPNCNAPLFQNRFPTDVLVTGYDILTFWVSK 492

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + + + LL+   P    +       +KG+K+SKS GN +DP+EV+ + G DALR+FL   
Sbjct: 493 MVFQSILLTHKDPFKDVLLHGLVRDNKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTN 552

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G D FYD+  +    N    N + N +SR V +     D         T + +++L+
Sbjct: 553 AAPGFDLFYDETKVASSWN--FINKLWN-ISRFVKLNTSTLDTDF-DINLLTLTQKALLT 608

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
                 Q++    Q   +      +   V E   + + +  K   +   +N         
Sbjct: 609 QLHLTTQKVTTLYQKYELKEIGKILYHFVWEDFANWHLEFAKHDLDQNNSNLTNLHNSQK 668

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
             V +++ +  LL  F+P + + +++ 
Sbjct: 669 FLVYMMKHILQLLHPFIPFVTDALYEN 695



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +         + H+GHA+   I D++ RF ++ G DVLF  G D  G       
Sbjct: 31  NKKTFTVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQGFDVLFLPGMDHAGIATQNKV 90

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
           +                        + +++++N R    VL +  D      T +     
Sbjct: 91  KEQLKQEGLLTKTLSKEIFLKYAWQWKEEHAQNIRQQWQVLGLHLDYNFEKFTLDPDLSQ 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             + ++ K+  K  IY+      +    +   ++ EV   
Sbjct: 151 QVQEVFGKLFQKKLIYRDYKIINWDPETKTALSNVEVNYH 190


>gi|292669573|ref|ZP_06602999.1| isoleucyl-tRNA synthetase [Selenomonas noxia ATCC 43541]
 gi|292648782|gb|EFF66754.1| isoleucyl-tRNA synthetase [Selenomonas noxia ATCC 43541]
          Length = 1039

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/447 (14%), Positives = 134/447 (29%), Gaps = 18/447 (4%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
               ++ F    ++ G+              VFV        D  +     +     T  
Sbjct: 334 CRKYNMPFVQFVNDKGEMTE-----ETDWPGVFVKDADPLIIDDLEKSGKLFKAPEFTHS 388

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
             H   C       +      K        + + A  N      G        +H  VQ 
Sbjct: 389 YPHCWRCDTPLIYYAHASWFIKMTAVRDALVANNATVNWIPKTIGDGRFGNWIEH--VQD 446

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKTFDW 216
                  +  +       S    H    +   R  +        L      +++ K  + 
Sbjct: 447 WSISRDRYWGTPLNIWKCSCGHEHAIGSIAELRSLQPDCPADIELHRPYIDAITFKCHEC 506

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G ++   P+ ++  W D+ +       Y         K++PAD      D     F+++ 
Sbjct: 507 GGEMHRVPE-VIDCWFDSGSMPFAQWHYPFENKEVFEKYFPADFISEAVDQTRGWFYSLI 565

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + LL    P    +         G+K+SKS GN ++P++ +   G DA+R++     A
Sbjct: 566 AISTLLFDKSPYKNVIVLGHVQDENGQKMSKSKGNAVEPMDALHRHGADAIRWYFYENSA 625

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILS 392
                 +  D +++     +           +   +  ++           +  D  + S
Sbjct: 626 PWLPNRFSDDAVQEGARKFMGTLWNTYAFYVLYANIDAFNPTQHTLDYDRLSVMDRWVFS 685

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT-NPDRASTVLYV 450
             + +++ + + + N  +  A   + S V E+ + Y    +     K   PD+       
Sbjct: 686 RLNTMVRTVDDCLANYRVTEAAKALQSFVEELSNWYVRRSRSRFWAKGMEPDKVDA-YLT 744

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
               +          VP +   I+  L
Sbjct: 745 LYTALVTTVKAAAPMVPFITESIYRNL 771



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N +PHIGH    +I D+L R+  + G  VL   G D HG  +    + 
Sbjct: 39  ETFTFYDGPPTANGRPHIGHVLTRVIKDMLPRYQSMKGRKVLRKAGWDTHGLPVELEVEK 98

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
           A                     +  V      + + +DV+    D      T E    ++
Sbjct: 99  AIGINGKEQIEEYGIEPFIKKCRESVWTYKAMWEEFSDVVGFWADMEHPYITYENDFIES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                K+I  KG +Y+G     Y  R     +  EV +G  
Sbjct: 159 EWWALKEIWKKGLLYQGHKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|256826639|ref|YP_003150598.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582782|gb|ACU93916.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 861

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+   H+GH     I DV+AR++ + G +VL   G D  G     AA
Sbjct: 30  DKPKKYVLEMFPYPSGDIHMGHVRNYSIGDVVARYNGMRGFNVLHPMGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT---TEKRHHDTCRILWKKISDKGDI 119
                    +   N    +     +  SYD + RT    +  ++   + ++ +   +G +
Sbjct: 90  IKHHSHPATWTYANIETQKASFKRMGFSYD-WDRTVVACDPEYYRWGQWMFLQFWKRGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +    +    +++V  G          + V+  +   ++ +++ Y  +LL  
Sbjct: 149 ERRNSPVNWCPSCKTVLANEQVVDG----RCWRCGSVVEKRDLTQWYLKITDYAQELLDD 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   + +          G
Sbjct: 205 LDQLTGWPDRVRQMQANWIGRSEG 228



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 101/267 (37%), Gaps = 21/267 (7%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y              A  W P D +V G +    H +Y   F   
Sbjct: 517 DTMDTFTCSSWYYLRYTDPHNDTVPFARDNANRWMPVDQYVGGIEHAILHLLYSRFFTKM 576

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +L  N P    +         GE +SKS GNVI P ++I   G DA+R +++   
Sbjct: 577 LRDMGMLDFNEPFTNLLTQGMVKDAHGETMSKSKGNVIAPEDMIAHYGADAVRTYILFMA 636

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDES-- 389
              KD  +D++GL           +   V+  +    +   +D      G  +  +++  
Sbjct: 637 PPDKDLQWDEEGLAGIYR--FLTRVWRQVNDLMGKAGESTLFDPTAQNAGKASSVEQAAK 694

Query: 390 -ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +     RV+ ++  +M+    + A+A ++ L + V  Y       E++  +P+ A+   
Sbjct: 695 VLRRERHRVVGKVTNDMERNSFNTAIAAIMELSNAVGSYV-RVASAEMRAADPELAA--- 750

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  EV   L  LL    P  A+++++
Sbjct: 751 -LDREVAEVLVKLLSPMAPHWADELWE 776


>gi|149185096|ref|ZP_01863413.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831207|gb|EDL49641.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 837

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+ + HIGH     + DVLAR+ +  G +VL   G D  G     A
Sbjct: 31  SDKPKSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKKATGHEVLHPMGWDAFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N  + +     L  + D    + T E  ++   + L+  + + G +
Sbjct: 91  AMEKGVHPGAWTRDNIEHMKAQLKRLGFALDWSRELATCEPDYYGHEQALFIDLYEAGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  +   +F +++A+ ++LL  
Sbjct: 151 YRKESEVNWDPVDMTVLANEQVIDGKG----WRSGAEVEKRKLNQWFLKITAFAEELLEG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
             S   +   +    E       GL
Sbjct: 207 LGSLENWPDKVRLMQENWIGKSKGL 231



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 34/177 (19%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP  +I+  G DA+R+F++ +    +D  + + G++         G    
Sbjct: 613 KMSKSKKNVVDPDTIIDTYGADAVRWFMLSDSPPERDLPWSEAGIE---------GCSRF 663

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   +               +  D+++L    + +  + E+++    ++A+A++  L 
Sbjct: 664 VHRLWRLFAAY-------DAGASGEDKALLRKTHQTVAAVAEDIEALGFNKAVARIYELT 716

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V            +K  P  + +      + IR L  L+   +P LA + +  L 
Sbjct: 717 GAV------------EKAAPSASRS------QAIRTLVQLVAPMMPHLAEEAWAGLG 755


>gi|86138606|ref|ZP_01057179.1| valyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824666|gb|EAQ44868.1| valyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 1035

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 137/370 (37%), Gaps = 34/370 (9%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E         +   G      + P   ++E G     S+     +  +    +F    ++
Sbjct: 488 ENIEPWCISRQLWWGHQIPVWYGPKVAVDESGAPLSPSSLDYSEVVAFC-GADFHEVCKK 546

Query: 193 RNEVISFVKSGLK------------DLSLSRKTFDW----GIKIPDDPQYIMYVWIDALT 236
            +E  +    GL             D       F W       +  DP  ++  W  +  
Sbjct: 547 ADEYYNKFHLGLGGYTELEAGDSFADFKDESNEFWWEGQAYAHLMRDPD-VLDTWFSSGL 605

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH---AIYWPAFLLSANLPLPKKVFSH 293
             + T G+ +  +   +K++P    V G+DIL F     +     +L  +LP+ +++   
Sbjct: 606 WPIGTLGWPEWSE-ETSKYFPTSTLVTGQDILFFWVARMMMMQLAVLDQDLPVEQRIPFD 664

Query: 294 GFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              LH      KG+K+SKS GNV+DP+E+I+E G DALR+      + G     D   + 
Sbjct: 665 TVYLHGLVRDAKGKKMSKSTGNVVDPLEIIDEYGADALRFTNAAMASLGGVLKLDMQRIA 724

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
              N         +   + + +  +       P A    ++ I+   ++V  E+   ++ 
Sbjct: 725 GYRNFG-TKLWNAVNFANFNNVYDETQPGYSCPEAKAAVNQWIIGETAKVRVEVDAALEA 783

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQA 464
              + A   + + V     D Y +  KP  L  +  +   +        V+ Q  +LL  
Sbjct: 784 YRFNDAALSLYAFVWGKVCDWYIELSKP--LFGSEDEAVINETRQTLGWVLDQCMVLLHP 841

Query: 465 FVPKLANKIF 474
            +P +  +++
Sbjct: 842 IMPFITEELW 851



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 35/182 (19%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA+   + D+L R+ R+ G D L+  GTD  G       +    
Sbjct: 40  CIMIPPPNVTGVLHMGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMVVERELA 99

Query: 68  TT----------------KVFVDQNSRNFRDMADVLDISYDDFIRTT------------- 98
                               + +Q+     +    L  S D F RT              
Sbjct: 100 KEGKKRTDFSRPDFLAKIWEWKEQSGGTIIEQLKRLGASCD-FDRTAFTMAGAHGDTRTG 158

Query: 99  ---EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                  HD    ++ ++ +KG IY+G     +    E   +D EV       +      
Sbjct: 159 HENSPNFHDAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIETPGHMWHFKY 218

Query: 156 PV 157
           P+
Sbjct: 219 PL 220


>gi|241068522|ref|XP_002408458.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492446|gb|EEC02087.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 819

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 26  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 85

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 86  AIKNNSHPKDWTYSNIENMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 145

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+    + +F +++ Y ++LL+ 
Sbjct: 146 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRYLKQWFLKITDYAEELLNE 201

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   I    E       G
Sbjct: 202 IQNLKEWPEAIRFMQEKWIGKSIG 225



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 128/389 (32%), Gaps = 36/389 (9%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 398 ISRQRFWGCPIPMIHCEACGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVNC 454

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 455 PKCDKPAVRETDTFDTFFESSWYFTRYCNSNATDMTDKKACDYWLPVDKYIGGIEHA--- 511

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 512 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 569

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R+F++ +    KD  +   
Sbjct: 570 KFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRFFVLSDSPPEKDLEWSAS 629

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++               SR ++ +   ++ +       TE  + +  +    ++ + E+
Sbjct: 630 GIEG-------------CSRFINRLEHMFEAIDSLKDDITEISKELNRLVYFTIKHVAED 676

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 677 IKHFALNRAIARMRELSNAISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 723

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 724 FIPHITEEIWQKLGNKERLYNSSFPAFDE 752


>gi|302342845|ref|YP_003807374.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639458|gb|ADK84780.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 830

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     I D LAR  R+ G +VL   G D  G     AA 
Sbjct: 39  KPKYYLLEMFPYPSGRIHMGHMRVYSIGDALARLKRMRGFNVLHPMGWDAFGMPAENAAI 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N    R     L  SYD    + T +  ++   ++++ K+ +KG +Y+
Sbjct: 99  AHHTHPAKWTYENIAYMRGQLKKLGFSYDWRRELATCDPSYYRWEQLVFIKMWEKGLVYR 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  + +    +++V  G          +  Q  +  GYFFR++ Y  +LL + E
Sbjct: 159 KKSLVNWCAKCQTVLANEQVEDGK----CWRCDSEAQKKQMHGYFFRITDYVQELLDHTE 214

Query: 182 SHPEFILPIERRNEVISFVKSG 203
             P +   +            G
Sbjct: 215 KLPGWPERVLTMQRNWIGKSHG 236



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 26/253 (10%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPK 288
           Y          D ++  +W P D +V G +    H +Y   F        +L  + P   
Sbjct: 516 YACPDYVDGPLDPARVDYWMPVDQYVGGIEHAVLHLLYSRFFVKVLRDLGMLKVDEPFL- 574

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + + G ++  G K+SKS GNV+DP +++   G D +R F +      +D  +   G++ 
Sbjct: 575 NLLTQGMVIKDGAKMSKSKGNVVDPDDMVARYGADTVRLFSLFAAPPERDLEWSDQGVEG 634

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                 A+     + R    + +   G  P P         +       ++++ E+    
Sbjct: 635 ------AHRFLGRLWRLGLAVAETPAGERPGPCDGPLG--ELRRKAHETIKKVTEDTDRF 686

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + A+A ++ L+++        +       +P RA+    V  E +    +L+    P 
Sbjct: 687 QFNTAIAALMELINQ----ISLVEQDAALADDPRRAA----VLREAVEAAVVLISPMAPH 738

Query: 469 LANKIFDILFVAD 481
           +A++++  L  A+
Sbjct: 739 IADELWSRLGHAE 751


>gi|289547884|ref|YP_003472872.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181501|gb|ADC88745.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 604

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 6/181 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ EK+Y+     YP+ + H+GH     I D +ARF R+ G  VL   G D  G     A
Sbjct: 27  EKGEKVYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLRMRGKAVLHPMGWDAFGLPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    RD    L  SY  D  I T +  ++   + ++ K  +KG  
Sbjct: 87  AIKHGVHPAQWTKSNISYMRDQLRRLGFSYDWDREIATCDPEYYRWNQWIFLKFLEKGLA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   DE    +++V +G           P+   +   ++ R++ Y ++LL  
Sbjct: 147 YRKEAEVNYCPNDETVLANEQVIEG----RCWRCGTPIVRKKVPSWYLRITQYAERLLED 202

Query: 180 Y 180
            
Sbjct: 203 L 203


>gi|77461178|ref|YP_350685.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123758186|sp|Q3K6B0|SYL_PSEPF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77385181|gb|ABA76694.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 868

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIAYMKSQLRSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +    +   ++           G+
Sbjct: 207 DELTGWPEQVKTMQRNWIGKSRGM 230



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 83/197 (42%), Gaps = 28/197 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK++KS  N +DP  +I++ G D  R F++          +   G++             
Sbjct: 626 EKMAKSKNNGVDPQSMIDQFGADTCRLFMMFASPPDMSAEWSDSGVEGSH---------R 676

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      +  +  + I     + +++   ++ QN   + A+AQ
Sbjct: 677 FLKRVWRLAQAHITQGLPGKLDIASLNDEQKVIRRAIHQAIKQASHDVGQNHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +++          + T  DRA     +  E +  + +LL    P +++++++ 
Sbjct: 737 VMTLMNVLEK--------AAQATEQDRA-----LVQEGLETVTLLLAPITPHISHELWNR 783

Query: 477 LFVADE--NRCFQSLDQ 491
           L  AD   +  +  LD+
Sbjct: 784 LGHADPVIDASWPVLDE 800


>gi|23346617|ref|NP_694808.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|48428659|sp|Q8VDC0|SYLM_MOUSE RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|18250728|emb|CAD20988.1| leucyl-tRNA synthetase [Mus musculus]
 gi|51330502|gb|AAH80303.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|148877726|gb|AAI45983.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|223459884|gb|AAI38207.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     AA 
Sbjct: 80  KPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAI 139

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  Y+
Sbjct: 140 ERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 199

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    +          V+      +F + +AY   +     
Sbjct: 200 KEALVNWDPVDQTVLANEQV---NEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALA 256

Query: 182 SHPEFILPIERRNEVISFV 200
             PE+      +   I   
Sbjct: 257 DLPEWYGIKGMQAHWIGDC 275



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 107/329 (32%), Gaps = 63/329 (19%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV 262
           L+ ++ S        K   D              Y            + A FW P DL++
Sbjct: 498 LEWVNCSCPRCKGSAKRETDTMDTFVDSAWYYFRYTDPHNTQSPFGSALADFWMPVDLYI 557

Query: 263 IGKDILRFHAIYWPAFLLSAN--------LPLPK------------KVFSHGFILHK--- 299
            GK+    H  Y        +         P  K            ++ S   +  +   
Sbjct: 558 GGKEHAVMHLFYARFLSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQCLKKEDID 617

Query: 300 ------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                              EK+SKS  N +DP E++ + G+D +R +++      KD  +
Sbjct: 618 FTGPAPVCAKTKEKLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILW 677

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE----SILSVCSRV 397
           D   +K      +      L S +   I     G +P P      ++    ++    + V
Sbjct: 678 D---VKTDALPGVLRWQQRLWSLTTRFIEARTSGTVPQPQLLNSKEKTKAQNLWEYKNAV 734

Query: 398 LQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++  +  ++  ++  ++Q++ L S +     A +   L     + A          + 
Sbjct: 735 IAQVTTHFTEDFALNSVVSQLMGLSSALS---QASQRVVLHSPEFEDA----------LC 781

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++++  L +     C
Sbjct: 782 ALLVMAAPLAPHVTSELWAGLTLVPSKLC 810


>gi|222823651|ref|YP_002575225.1| valyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538873|gb|ACM63974.1| valyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 870

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 76/385 (19%), Positives = 144/385 (37%), Gaps = 55/385 (14%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
            D+ +    E Y    G  Y    N V+    + + F       + +           P 
Sbjct: 323 EDKGFVEKIEDYTNQVGYCYR-CKNVVEPYISKQW-FVKKEIAKESIEKVNLGGSKFYPA 380

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
              N   +     LKD  +SR+   WG +IP                             
Sbjct: 381 HWIN-SFNAWMRDLKDWCISRQ-LWWGHQIPVYYCECSHEWASEETPTSCPKCQSANFKQ 438

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--A 272
           DP  ++  W  +    ++T G+ +          +     F+P  L + G DIL F    
Sbjct: 439 DPD-VLDTWFSSGLWAMSTLGWGNKDWGKNTLWHEDDLKDFYPNSLLITGFDILFFWVAR 497

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + + +      LP             +G K+SKSLGNVIDP++ ++E   D LR+ L   
Sbjct: 498 MMFQSTNALNELPFKDIYLHALVKDEQGRKMSKSLGNVIDPVQSVDEYSADILRFTLALL 557

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G+D     D L +  N    N + N  S+ + +  + ++ +       T + + +LS
Sbjct: 558 AIQGRDIKLSNDKLIQVRN--FTNKLYN-ASKFLLLNEEKFEDLNIENIKSTLA-KYMLS 613

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             +  ++E+REN+ N   + A   +         ++D    W ++ +  +++S  +    
Sbjct: 614 RFNLCVKEVRENLDNYRFNDAANTLYRF------FWDEFCDWGIELSKAEKSS--IKELG 665

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            + ++   LL  F+P ++  ++  L
Sbjct: 666 SIFKEALKLLNPFMPFISEYLYHEL 690



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           ++ +   I           HIGHA    + D+  R+ R+DG   L+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTCTLQDITTRYKRMDGYKTLYQPGLDHAGIATQNV 89

Query: 60  -------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKR 101
                  +  +   +  + F+ +                R +      S   F  T ++ 
Sbjct: 90  VEKQLLAQGIKKEELGREEFIKKVWEWKEQSGGTIVKQMRILGITPAWSRLRF--TMDEG 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             +  +  +  + DK  I +G Y   +   D A  + +  +K   G+ Y+ ++
Sbjct: 148 LVNAVKKAFVDLYDKKLIVRGNYMVNWCTHDGALSDIEVEHKENKGKLYHLRY 200


>gi|325129093|gb|EGC51942.1| valyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 945

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 79/386 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDETGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEVG-------------------------------------VDALRYFLVREIAC 335
           P+++I+ +G                                      DALR+ +    + 
Sbjct: 563 PVDLIDGIGLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
           G+   +D          +  N I N  +  V M  ++ D         P  ++  D  I+
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKIWN-ATNFVLMNTENQDCGYGATATEPRGYSFPDMWIV 679

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              ++ ++++ +  +      A   + S V     D Y +  K  +L+     R     +
Sbjct: 680 GRLNQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKV-QLQTGCASRQRATRH 738

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
             + V+     LL   +P +  +++ 
Sbjct: 739 TLLRVLEAALRLLHPIIPLITEELWQ 764



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|210634029|ref|ZP_03297947.1| hypothetical protein COLSTE_01865 [Collinsella stercoris DSM 13279]
 gi|210158973|gb|EEA89944.1| hypothetical protein COLSTE_01865 [Collinsella stercoris DSM 13279]
          Length = 862

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     A
Sbjct: 45  STKPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFDVLHPIGFDAFGLPAENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N          +  SY  D  ++T    ++   + +++K+ ++G +
Sbjct: 105 AIKHNTQAAAWTYKNMDQALATMKRMGFSYDMDRLVKTCSPDYYRWGQWIFEKLWERGLV 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + E    +++V +G          + V+  + E ++ +++ Y  +LL  
Sbjct: 165 YRKKNPVNWCPKCETVLANEQVTEG----RCWRCDSEVEKRDLEQWYIKITEYAQELLDD 220

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E  P +   +++          G
Sbjct: 221 LEKLPGWPERVKQMQANWIGRSEG 244



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 91/267 (34%), Gaps = 27/267 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y              A  + P D ++ G +    H +Y   F   
Sbjct: 531 DTMDTFTCSSWYYLRYTDPHNTELPFSREAANRFMPVDNYIGGIEHAILHLLYSRFFTKA 590

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L  + P    +         G+ +SKS GNV+ P  VIE  G D +R  ++   
Sbjct: 591 LRDMGLLDVDEPFTNLLCQGMVKDENGDTMSKSKGNVVPPSSVIEPFGADTMRLAILFIA 650

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFTESDESILS 392
              KD  +D + ++       AN       R+V  ++    D  +    +  +    +  
Sbjct: 651 PPEKDFDWDPNAVEG------ANRFIKRAWRTVWQLVQTAGDASMLDKASLFKPALELYR 704

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              R L +  E+      + A++ ++ LV+  + Y +A     +     D A T L    
Sbjct: 705 ERHRTLAKCTEDFDRGQFNTAISAMMELVNAANAYLNA-----VPADERDAALTAL---- 755

Query: 453 EVIRQLAILLQAFVPKLANKIF-DILF 478
            V   +  +L    P +  +++ + L 
Sbjct: 756 -VATDIVSVLAPICPFVCEELWHEALG 781


>gi|195587864|ref|XP_002083681.1| GD13863 [Drosophila simulans]
 gi|194195690|gb|EDX09266.1| GD13863 [Drosophila simulans]
          Length = 869

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 11/230 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA
Sbjct: 60  SKDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y
Sbjct: 120 NQRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    D++V          A+   V+      +F R SAY  +LL   
Sbjct: 180 QNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLRQWFIRTSAYAKQLLDGL 236

Query: 181 ------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 +      L      E   +  + L   S   + +    +   DP
Sbjct: 237 EDPTLRDWRDIINLQRHWIGECDGYAFNLLTSASGFLRVWTTHPEHLKDP 286



 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 109/368 (29%), Gaps = 70/368 (19%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+      +S         +        G K 
Sbjct: 395 KLKDWLISRQRYWGTPIPIVHCQKCGAVPVPEEQLPVSLPPKDSPKEAFLCDCPKCGEKD 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      ++          +F P DL++ GK+    H  Y  
Sbjct: 455 ARRETDTMDTFVDSSWYYLRYLDAQNSESIFDPALTKRFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFL---LSANLPLPKKVFS---------HGFILHKG------------------------ 300
                  S  L    + FS               KG                        
Sbjct: 515 FMNQFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYVPESEVEIVNAKKNQAVLKE 574

Query: 301 ---------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                    EK+SKS  N ++P ++  E G D  R  ++ ++A      +        +N
Sbjct: 575 TKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLIILADVAPTSHRNWSSATFPGILN 634

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
                    L     +   ++   ++PT   F   D  +    +  ++    N +  Q +
Sbjct: 635 WQ-KRLWLTLQDFQEAREDQNASDVVPTSEEFLAEDAKLFDARNFYVKGATFNYRHAQQL 693

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA---ILLQAFVP 467
             A++++  L +             L++T       VL    +  R LA   I+L    P
Sbjct: 694 SVAISKMQGLTN------------SLRRTP----KHVLRHGKQFERALAAQIIMLAPMAP 737

Query: 468 KLANKIFD 475
             A++++ 
Sbjct: 738 HFASELWS 745


>gi|311746266|ref|ZP_07720051.1| valine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576499|gb|EAZ80777.1| valine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 877

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/413 (15%), Positives = 135/413 (32%), Gaps = 22/413 (5%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             +    S+ G   +        L  + +   DE+ K A                +  Y 
Sbjct: 333 EKIEDYKSNVGHSERTDAVIEPKLSLQWFLKMDEITKPAQKAVMEDIIQLYPPKFKNMYR 392

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIKIPDDP 224
             +   +D  +S        I      N      K+  + L ++ + F   +  K     
Sbjct: 393 AWMDNVRDWCISRQLWWGHRIPAYHLPNGEFVVAKTAEEALKIANEQFGGQFTAKDLQQD 452

Query: 225 QYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
           + ++  W  +    ++            +     ++P +  V   +IL F    +    +
Sbjct: 453 EDVLDTWFSSWLWPISVFDPEVFTTSKANEELKYYYPTNDLVTAPEILFFWVARMIIAGY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P      +       G K+SKSLGN  DP+E+I + G D +R  ++     G D
Sbjct: 513 EYMGEKPFNNVYLTGIVRDKLGRKMSKSLGNSPDPLELIAQNGADGVRTGMLFSSPAGND 572

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             YD   +++  N        N +  +  ++            A   S E   +   + L
Sbjct: 573 LPYDDKLVEQGRN------FSNKIWNAFRLVKGWEIDPSLDGAANKSSIEWFENRFHQAL 626

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            EI  + +   I  AL     LV       Y +  KP      + +        T+E+  
Sbjct: 627 AEINAHFEKFRISDALMTTYKLVWGDFCSWYLEMIKPEYQHPIDQE----TYDKTIEIFE 682

Query: 457 QLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
            +  +L  F+P ++ +++  +     +E+    S  +       + +  + +F
Sbjct: 683 DILKILHPFMPFISEELWHQIDERSVEESLILASWPEEKTFDATITEEANQVF 735



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E   I+          H+GH     I DVL R  R+ G + L+  GTD          
Sbjct: 33  NKEPYVITMPPPNVTGVLHMGHMLNNTIQDVLIRRARMQGKNALWVPGTDHASIATETKV 92

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + ++      D    L  S  +D    T ++   D
Sbjct: 93  VNLLKEQGIDKKSLTREKFLEHAWEWKEKYGGIILDQLKKLGASCDWDRTAFTMDEGLSD 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               ++  +  KG IY+G     +  + +   +DDEV
Sbjct: 153 AVISVFVDLHKKGKIYRGIRMVNWDPKGKTALSDDEV 189


>gi|109730423|gb|AAI11893.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     AA 
Sbjct: 80  KPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAI 139

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  Y+
Sbjct: 140 ERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 199

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    +          V+      +F + +AY   +     
Sbjct: 200 KEALVNWDPVDQTVLANEQV---NEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALA 256

Query: 182 SHPEFILPIERRNEVISFV 200
             PE+      +   I   
Sbjct: 257 DLPEWYGIKGMQAHWIGDC 275



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 107/329 (32%), Gaps = 63/329 (19%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHV 262
           L+ ++ S        K   D              Y            + A FW P DL++
Sbjct: 498 LEWVNCSCPRCKGSAKRETDTMDTFVDSAWYYFRYTDPHNTQSPFGSALADFWMPVDLYI 557

Query: 263 IGKDILRFHAIYWPAFLLSAN--------LPLPK------------KVFSHGFILHK--- 299
            GK+    H  Y        +         P  K            ++ S   +  +   
Sbjct: 558 GGKEHAVMHLFYARFLSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQCLKKEDID 617

Query: 300 ------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                              EK+SKS  N +DP E++ + G+D +R +++      KD  +
Sbjct: 618 FTGPAPVCAKTKEKLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILW 677

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE----SILSVCSRV 397
           D   +K      +      L S +   I     G +P P      ++    ++    + V
Sbjct: 678 D---VKTDALPGVLRWQQRLWSLTTRFIEARTSGTVPQPQLLNSKEKTKAQNLWEYKNAV 734

Query: 398 LQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + ++  +  ++  ++  ++Q++ L S +     A +   L     + A          + 
Sbjct: 735 IAQVTTHFTEDFALNSVVSQLMGLSSALS---QASQRVVLHSPEFEDA----------LC 781

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            L ++     P + ++++  L +     C
Sbjct: 782 ALLVMAAPQAPHVTSELWAGLTLVPSKLC 810


>gi|312891064|ref|ZP_07750588.1| Isoleucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296531|gb|EFQ73676.1| Isoleucyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 1130

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/439 (14%), Positives = 135/439 (30%), Gaps = 29/439 (6%)

Query: 85  DVLDISYDDFIRTTEKR-HHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYNDDE 140
              + SY    RT E   ++       K  + K  + +   +  +         + N  E
Sbjct: 446 KKYEHSYPHSWRTDEPILYYPLDSWFIKTTAVKDKLVELNKTINWKPESTGTGRFGNWLE 505

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                +         P+    EE             ++      +         +     
Sbjct: 506 NLVDWNLSRSRYWGTPLPIWREENGTEEKC---IGSIAELNKEIDAAADAGFMPKGFRLE 562

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                 +         G K+  +P  ++ VW D+         +        A  +PAD 
Sbjct: 563 DMHRPYVDDVILVSSTGQKMFREPD-LIDVWFDSGAMPYAQWHFPFENKEQFADAYPADF 621

Query: 261 HVIGKDIL--RFHAIYWPAFLLSA---------------NLPLPKKVFSHGFILHKGEKI 303
              G D     F  ++  A +LS                 +     V +   +   G K+
Sbjct: 622 IAEGVDQTRGWFFTLHAIAVMLSEASDEVKAVNTLVGNPGVAFKNVVSNGLVLDKNGNKM 681

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK LGN +DP E I + G DA R++++   A   +  ++ +GL +               
Sbjct: 682 SKRLGNAVDPFETISKYGADAARWYMISNAAPWDNLKFNLEGLDEVRRKFFGTLYNTYSF 741

Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            ++   + ++             E D  I+S+ + + +E+ +   +    +A   + + V
Sbjct: 742 FALYANIDNFTYSEAEIALNDRPEIDRWIISLLNTLTKEVDDFYADFEPTKATRAIQNFV 801

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            E   + Y    +    +  N     +        +  ++ L+    P  A ++F  L  
Sbjct: 802 DEHLSNWYVRLSRRRFWRSDNSADKLSAYQTLYTCLVTISKLMSPVAPFFAERLFTDLNS 861

Query: 480 ADENRCFQSLDQRLKPGFM 498
             +    +S+     P + 
Sbjct: 862 ITKKETVESVHLADFPAYQ 880



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P I H     I D+  R+  L G  V    G D HG  I  A + 
Sbjct: 38  KPYTFYEGPPSANGMPGIHHVMARSIKDIFCRYKTLKGYQVKRKGGWDTHGLPIELAVEK 97

Query: 65  AGVTTKVFVDQ-------NSRNFRDMADVLDISYD------------DFIRTTEKRHHDT 105
           +   TK  + +       N    +++    D+  D            D   T +  + ++
Sbjct: 98  SLGITKDDIGKKISIHDYNEACRKEVMRYTDVWNDLTEKMGYWVDLNDPYITYKNEYIES 157

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
              +  ++  KG +YKG     YS +
Sbjct: 158 LWWILSELYKKGWLYKGYTVQPYSPK 183


>gi|254496566|ref|ZP_05109434.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354190|gb|EET12857.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 824

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 9/232 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+   H+GH     I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 31  NKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALGKNVLQPIGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  +N  + +     L  +YD    I T    ++   +  + ++ +KG +Y
Sbjct: 91  IKNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREICTCAPEYYRWEQWFFIRLFEKGLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G            V+  E   +F +++AY D+LLS  
Sbjct: 151 KKNAVVNWDPVDQTVLANEQVVDG----RGWRSGALVERKEISQWFIKITAYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMY 229
           ++  E+   +++         SG     ++S   K        PD    + Y
Sbjct: 207 DTLDEWPAQVKQMQRNWIGRSSGTEIYFNVSNYHKRLKIYTTRPDTLMGVTY 258



 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 32/276 (11%)

Query: 222 DDPQYIMYVWIDALTNYLTTTG--YLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
                    ++++   Y         +     +AK+W P D ++ G +    H +Y   F
Sbjct: 486 CRETDTFDTFVESSWYYARFACKGQENAMLDDRAKYWTPVDQYIGGIEHAVMHLLYARFF 545

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    ++++ P  K + + G +L  G K+SKS+GNV+DP  +I+  G D  R F++
Sbjct: 546 HKLMRDEGLVNSDEPF-KALLTQGMVLKDGHKMSKSVGNVVDPNHLIDTYGADTARLFVM 604

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDE 388
                 +   +   G++          +     + +SM     D ++   G     + D 
Sbjct: 605 FASPPEQSLEWSDAGVEGAHR--FLKRVWAFAYQHLSMFTDINDIILSGNGHVNWQQVDA 662

Query: 389 SILS---VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +     V  ++L +   +      +  ++  + L +E+  Y          +T  D+  
Sbjct: 663 RLKKSRHVVHQILAQATHDYDRNQFNTVVSGCMKLFNEMSSY--------SMETEDDK-- 712

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +     +  L  LL    P +A+ ++  L    
Sbjct: 713 ---FFIHSSMSILLRLLAPITPHIAHHLWQQLGFEK 745


>gi|113461402|ref|YP_719471.1| valyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823445|gb|ABI25534.1| valyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 948

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 134/399 (33%), Gaps = 86/399 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +      E+     +P +  N   S+++  ++D  +SR+   
Sbjct: 373 PIEPMLTDQWYVSVKPLAEVATKAVENGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 430

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D Q  +YV                            W  +     +T G+ 
Sbjct: 431 WGHRIPAWYDEQGNVYVARDEAEVRSKYGLTSDVALKQDEDVLDTWFSSGLWTFSTLGWP 490

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 491 EQTKELKIFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 549

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 550 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFEHGISAH 609

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 610 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRYVLTHEKLDLSEG---E 664

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             ++ +D  I S  +R +   R  ++          +         D Y +  KP     
Sbjct: 665 AEYSLADRWIESQFNRTIDAFRTALKQYRFDLVANTIYDFTWNQFCDWYLELTKPVFAHG 724

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T+  +  T   + + ++ +L  L    +P +  +I+  L
Sbjct: 725 TDAQKRGT-SRMLLNILEKLLRLAHPIIPFITEEIWQKL 762



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I+          H+GHA++ I+ D L RF+R++G + L+ TGTD  G       + 
Sbjct: 33  PSYCIAIPPPNVTGSLHMGHAFQQILMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVER 92

Query: 65  AGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D   + F  T ++   
Sbjct: 93  KIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 151 NAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 204


>gi|301156601|emb|CBW16072.1| valyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 954

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 136/417 (32%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYSLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQ 786



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|269865281|ref|XP_002651869.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063727|gb|EED42187.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 320

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 37/305 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++  +       +  
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIF--LKTIDHFDEKE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWME--EEGYFFRLSAYQDKLLS 178
            +  +  + + +  D  +          + +      ++ E  +E   FR S  +     
Sbjct: 128 INQMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQELTNFRCSICKTTPQI 187

Query: 179 YYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRK-TFDWGIKIPD 222
                  F L   +                    +++K  L    ++RK    WG+ +P 
Sbjct: 188 KTTKQLFFNLNELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPL 247

Query: 223 DP--QYIMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADLHVIGKDILRFHA 272
                 + YVW DA   YL+             D  +  K   W   +  +GKD + FH+
Sbjct: 248 KEYDDKVFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKW---VLFMGKDNVPFHS 304

Query: 273 IYWPA 277
           I +P 
Sbjct: 305 IIFPC 309


>gi|52548779|gb|AAU82628.1| isoleucyl-tRNA synthetase [uncultured archaeon GZfos18H11]
          Length = 1002

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 105/274 (38%), Gaps = 13/274 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++  W D+         Y    D    + +PAD      D     F+++   +  +  
Sbjct: 516 GDVIDCWYDSGAAPFAQWHYPFEKD-EFERNFPADFITEAIDQTRGWFYSLLAISTTIFD 574

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  KG K+SKS GNV+D   ++++ G DALR++         D  + 
Sbjct: 575 TAPYLNVLSLGHILDEKGVKMSKSKGNVVDITSMLDKEGADALRWYFYTAGPLSDDVRFT 634

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
           + G+ ++    L     +        ++ +++              D  I+S  + + +E
Sbjct: 635 EKGIIEKQKKFLNTLWNSYFFFVTYAVIDEFNPNEKKIPVERRNAMDRWIISRLNTLTKE 694

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT-NPDRASTVLYVTVEVI 455
           + E+++   IH A  ++   +     + Y     ++ W ++   + D A        EV+
Sbjct: 695 VIESIERFEIHVAARKMEEFIVNDLSNWYIRRSRRRFWIVEADFDKDSA---YITLFEVL 751

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             L  LL  FVP +   I+  L     +   +S+
Sbjct: 752 VSLCKLLAPFVPFITEHIYQKLVRGVSDDVLESV 785



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 19/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +K          N  PH GH    ++ D++ R+  + G  V    G D HG  +   
Sbjct: 38  RDSKKFVFIEGPPTANGLPHPGHILTRVVKDLVLRYRTMQGYYVERKAGWDTHGLPVEIE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V +  + + +    +   I  D    T + ++
Sbjct: 98  VEKNLRINTKGEIENYGIEKFNKKCKDSVFRYEKEWVNATKRVGFWIDMDSPYITFDNKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            ++     K+   KG +YKG     Y  R E   +  EV +G 
Sbjct: 158 IESVWWSLKETWKKGLLYKGHKVVPYCPRCETTLSSHEVAQGY 200


>gi|269114822|ref|YP_003302585.1| Valyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322447|emb|CAX37182.1| Valyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 839

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 71/350 (20%), Positives = 130/350 (37%), Gaps = 41/350 (11%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ + +  +F ++S +   LL    S     +   R    +        D ++SR+   
Sbjct: 346 PIEILVQPQWFVKMSEFSKMLLKDLRSDEGVKIFPPRFESTLENWMENAHDWTISRQ-IW 404

Query: 216 WGIKI--------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           WG +I                          ++  W  +        G+  +    K ++
Sbjct: 405 WGHRIPAWYNEQNEIKVQIQKPEGNWKQDDDVLDTWFSSGLAPFVFLGWPQDKSKLK-RY 463

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  L V G DI+ F    +Y+ +       P    +        +G K+SKSLGN I+P
Sbjct: 464 FPTSLLVTGYDIIFFWVARMYFFSLYFMDQKPFEHLLLHGLVRDSQGRKMSKSLGNGINP 523

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           I+VI+E G D LR  L+     G D  Y  + ++       AN   N+     ++ +   
Sbjct: 524 IQVIDEYGSDVLRMSLIFNCTPGLDINYSDEKIQGA--KLFANKFWNIARFVENIPVSIT 581

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
           + +        E D  IL+      + I + M    +      +   V     + Y +  
Sbjct: 582 EKI--DFNKLDEYDNWILNEYLTFKKNIEDAMDKYELTIIYKHIQDFVVDKFSNWYLEFL 639

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           K     K N        Y+   + +Q+ ILL  F+P L + +F+ L+  +
Sbjct: 640 K----FKEN-------SYLIHYLFKQILILLHPFMPFLTDYVFEKLYHEE 678



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 18/178 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I           HIGHA +  I+D + RF +L G DVL+  GTD  G      
Sbjct: 29  ESKKPFTIILPPPNVTGNLHIGHALDNYISDTIIRFKKLQGYDVLWLPGTDHAGIATQAV 88

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDD-FIR-TTEKRHH 103
            +    +                   +VD+ S+N  +    L ++ D  F R T +   +
Sbjct: 89  VEKKLASQNINKYQLGREEFIKKVWEWVDEYSKNIHNQWQKLGLALDYGFERFTLDDNSN 148

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           +    ++ ++ + G IY+   +  +    E   ++ EV      Q       P++  E
Sbjct: 149 EAVLKVFIELYENGLIYRDKKAINWDPVLETALSNIEVVPKETKQKMYYIKYPIKNSE 206


>gi|121634194|ref|YP_974439.1| leucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166231622|sp|A1KS07|SYL_NEIMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120865900|emb|CAM09636.1| putative leucyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 876

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 126/360 (35%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 490 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 546

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 547 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 602

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R       A L +  LP+   V S        EK+SKS  N +DP E+I
Sbjct: 603 ADVELTFDDKGRP----ISAVLKADGLPV---VISGT------EKMSKSKNNGVDPQELI 649

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 650 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 703

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 704 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 756

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 757 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 810


>gi|15677729|ref|NP_274892.1| leucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|14285777|sp|Q9JXT2|SYL_NEIMB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|7227154|gb|AAF42228.1| leucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316985512|gb|EFV64459.1| leucyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325139552|gb|EGC62092.1| leucyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200950|gb|ADY96405.1| leucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 876

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 126/360 (35%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 490 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 546

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 547 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 602

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R       A L +  LP+   V S        EK+SKS  N +DP E+I
Sbjct: 603 ADVELTFDDKGRP----ISAVLKADGLPV---VISGT------EKMSKSKNNGVDPQELI 649

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 650 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 703

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 704 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 756

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 757 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 810


>gi|188589689|ref|YP_001919532.1| isoleucyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188499970|gb|ACD53106.1| isoleucyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 1036

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 143/429 (33%), Gaps = 14/429 (3%)

Query: 72  FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK-GDIYKGCYSGWYSL 130
           +  +  +   D         +   +T   RH  +    W+  +       +  +    SL
Sbjct: 354 WAGKFVKKCDDSICKWLEENNKLFKT--ARHLHSYPHCWRCDTPLLYYPKESWFVRMTSL 411

Query: 131 RDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEG--YFFRLSAYQDKLLSYYESHP 184
           RD+   N++++    D    G++     N + W       +   L  ++ +         
Sbjct: 412 RDKLLENNNKINWCPDNIRTGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHKECIGS 471

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
              L  +  N             ++  K    G ++    + ++  W D+ +       Y
Sbjct: 472 IAELKEKGINVPEDIELHKPYIDNVHLKCAHCGKEMKRTKE-VIDCWFDSGSMPFAQLHY 530

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PA       D     F+ +   +  +    P    +     +  KG K
Sbjct: 531 PFENKELFEQNYPAQFISEAVDQTRGWFYTLLAISTAVFDRNPFENCIVLGHVLDKKGLK 590

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP EV+   G DA R+      A      +  D + +     L+       
Sbjct: 591 MSKSKGNVVDPFEVLSSQGADATRWHFYTASAPWLPTRFSTDDVGESQRKFLSTLWNVYS 650

Query: 363 SRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
              +   +  ++        +    D+ I+S  + +++ + E + +  I  A   +    
Sbjct: 651 FYVLYAEIDSFNPLEYADFKSENVMDKWIMSKLNTLIKTVDEKLNSYDITAAALSIEEFT 710

Query: 422 SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            E+ + Y    +     +T  D           V+  L+ +   FVP +  +I+  L V 
Sbjct: 711 DELSNWYVRRNRSRYWTETINDDKIGAYVTLYRVLVTLSKVAAPFVPFITEEIYQNLVVN 770

Query: 481 DENRCFQSL 489
            +N   +S+
Sbjct: 771 LDNAAEESI 779



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +    +         
Sbjct: 47  PPTANGKPHVGHILTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCRILWKKI 113
                         K  V      +  M + +    D      T    + ++     K++
Sbjct: 107 QIEEYGVEKFVKECKESVFTYVSMWEKMTEQIGYWVDMEHPYVTYHNPYIESVWWALKQM 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +Y+G     Y  R     +  EV +G  
Sbjct: 167 WDKELLYEGHKVMPYCPRCGTALSSHEVAQGYK 199


>gi|296474707|gb|DAA16822.1| leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 617

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N R+ R   D L    S+D  + T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIRHMRKQLDQLGLCFSWDREVTTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQKYLRQWFIKTTAYAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LAGLPEWYGIKGMQAHWIGDC 276


>gi|293610939|ref|ZP_06693238.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826591|gb|EFF84957.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 965

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 140/408 (34%), Gaps = 95/408 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRE-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 438 GHRIPAWYDANGNIYVGRNEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------V 290
           +     A  +     P D+ V G DI+ F    W A ++   L   K            V
Sbjct: 498 DAQKDAANDFLKTFHPTDVLVTGFDIIFF----WVARMIMMTLHFMKNEDGSSQVPFKTV 553

Query: 291 FSHGFILH-KGEKISKSLGNVIDPIEVIEE------------------------------ 319
           + HG +   +G+K+SKS GNV+DP+++I+                               
Sbjct: 554 YVHGLVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKE 613

Query: 320 -------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
                   G DA+R+        G+D  +D   ++     +  N I N     +  +   
Sbjct: 614 FPEGINAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQ 671

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
             G    P  +   ++ I+S   +    + +      +  A   +   +     D Y + 
Sbjct: 672 TVGQQARPDLWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVEL 731

Query: 431 QKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KP     + + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 732 TKPVLNDAEVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 779



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGVTRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|296139191|ref|YP_003646434.1| valyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027325|gb|ADG78095.1| valyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 893

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 128/377 (33%), Gaps = 48/377 (12%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++                 I+P        ++V   + D ++SR+   
Sbjct: 361 PIEPRLSMQWWVKVDHLAKAAGDAVRDGETTIVPEHLAPRFFAWVDD-MHDWNISRQ-LW 418

Query: 216 WG--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYLDNP 248
           WG  I +   P                           ++  W  +     +T G+ +  
Sbjct: 419 WGHRIPVWYGPADADGNREVVCCGPDDTPPAGYEQDPDVLDTWFSSGLFPFSTMGWPEQT 478

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKG 300
               AKF+P    V G DI+ F       F             +P  + +         G
Sbjct: 479 A-DLAKFYPTSTLVTGYDIIFFWVARMMMFGTFIGEQPSAPGAVPFHEVLLHGLVRDEFG 537

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKS GN IDP++ ++E G DALR+ L R    G D     D      +   A  + N
Sbjct: 538 KKMSKSKGNGIDPLDWVDEYGADALRFTLARGTIPGADLNVGADA--AASSKKFATKLFN 595

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   M       + P   + T++D  IL   +    +    +    + +A   +   
Sbjct: 596 -ATKLALMNDARVGEL-PDRSSLTDADRWILDRLAATQADADAALDANELGKACEALYHF 653

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +   D Y +  K   L+  +   A +   V  + +  +  LL   +P +   ++  L 
Sbjct: 654 AWDELCDWYLEIAK---LQLQDAGLAESTRLVLGKALDVVLRLLHPTMPFVTEVLWKAL- 709

Query: 479 VADENRCFQSLDQRLKP 495
             +++    S   R   
Sbjct: 710 TGEQSLVIASWPSRDWA 726



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 54/160 (33%), Gaps = 22/160 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    +           H+GHA +  I D L R  R+ G +VL+  GTD  G       +
Sbjct: 43  KPAFSVVLPPPNVTGSLHLGHALDQTITDALCRRKRMQGYEVLWLPGTDHAGIATQSLVE 102

Query: 64  N-------------------AGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKRHH 103
                                    K     N     R +   +D S + F  T ++   
Sbjct: 103 KQLTAEGTSRREIGREQFLARAWAFKEASHGNITGQMRRIGVGIDWSRERF--TMDEGLS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + ++K++ D G IY+      +S   +   +D EV  
Sbjct: 161 RAVQTIFKQLFDAGLIYRAERLVNWSPVLQTGISDLEVDH 200


>gi|329962066|ref|ZP_08300077.1| valine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328530714|gb|EGF57572.1| valine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 880

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 125/374 (33%), Gaps = 59/374 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                + P++      +F ++  + D  L    +      P + +N         +KD  
Sbjct: 344 CSERTNVPIEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YKNWLENIKDWC 402

Query: 209 LSRKTFDWGIKIP------------------------------------DDPQYIMYVWI 232
           +SR+   WG +IP                                       +  +  W 
Sbjct: 403 ISRQ-LWWGHRIPAYFLPEGGYVVAATPEEALKLAKEKTANEALTLDDLRQDEDCLDTWF 461

Query: 233 DALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
            +    ++    ++NP   +   ++P    V G DI+ F    +    +     +P    
Sbjct: 462 SSWLWPISLFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNV 521

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
            F+       G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D    ++ 
Sbjct: 522 YFTGIVRDKLGRKMSKSLGNSPDPLDLIEKYGADGVRMGMMLSAPAGNDILFDDALCEQG 581

Query: 350 VNADLANGIGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
            N        N +  +  +I    + +G +  P     + +           EI +    
Sbjct: 582 RN------FCNKIWNAFRLIKGWTNGEGTVSVPADAQIAVQWFNLRLEVASAEIADLFSK 635

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV----LYVTVEVIRQLAILLQ 463
             +  AL  V  L      ++D    W L+   P     V        +    +L  LL 
Sbjct: 636 YRLSEALMVVYKL------FWDEFSSWLLEIVKPAYGQPVNGFIYTAVLSSFERLLELLH 689

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +++  L
Sbjct: 690 PFMPFITEELWQQL 703



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 63/209 (30%), Gaps = 18/209 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNRLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLYYLRYRVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERR 193
           Y    +   + ++           P    
Sbjct: 212 YAVVATTRPETIMGDTAMCINPNDPKNTW 240


>gi|289523254|ref|ZP_06440108.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503797|gb|EFD24961.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 823

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y      YP+   H+GH     I D++ARF  + G +VL   G D  G     AA
Sbjct: 29  KRPKFYCLEMFPYPSGALHMGHLRNYSIGDLMARFLTMRGYNVLHPMGFDAFGLPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N          +  SYD    I T    ++   +  + K  ++G  Y
Sbjct: 89  IKYGVHPFEWTWNNIERMTAQLKSMGCSYDWRRRIATCHPDYYRWNQWFFLKFYEEGLAY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V    +G +     + V   + + +F  ++ Y  +LL   
Sbjct: 149 RAEAPINWCPSCKTVLANEQV---IEGGHCWRCGSEVTKKKLKQWFLSITKYAQELLDSL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E  P +   ++           G
Sbjct: 206 EDLPGWPEKVKIMQRNWIGRSEG 228



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 108/305 (35%), Gaps = 46/305 (15%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--- 253
           +   K G   L    +  +        P       +D             +P   KA   
Sbjct: 458 VRMPKGGSSPLPTLEEWVNTTCPKCGGPAKRETDTLDTFFCSSWYFLRFCSPWCDKAPFD 517

Query: 254 ----KFWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGE 301
                + P D ++ G +    H IY   F        ++    P    + + G ++  G 
Sbjct: 518 DEVHYWTPVDQYIGGIEHACLHLIYSRFFTKVLADMGMIRFREPFV-NLLTQGMVIKDGA 576

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV+DP ++I+  G D  R F++      KD  +   G++         G+   
Sbjct: 577 KMSKSKGNVVDPDDIIKRYGADTARLFILFASPPDKDLEWSDQGVE---------GVYRF 627

Query: 362 VSRSVS-MILKDYDGMIPTPGAFTES------DESILSVCSRVLQEIRENMQ-NQLIHRA 413
           +SR    M  K  D     P   +          ++     R ++ +  +++  +  + A
Sbjct: 628 LSRVWRYMEDKIEDLKKADPARLSMESLREGKKRNLKRRIHRTIELVTRDIEVERQFNTA 687

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+ + L +E+     + +P    K   D       +  E    L + L  FVP    ++
Sbjct: 688 VARFMELFNEMY----SCEP----KDGAD-----WSLLREAAEVLVVCLSPFVPHFCEEL 734

Query: 474 FDILF 478
           ++ L 
Sbjct: 735 WERLG 739


>gi|308389992|gb|ADO32312.1| putative leucyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 878

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 33  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 93  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 153 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 209 DKLEHWPEQVKTMQRNWIGKSRGMTVR 235



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 126/360 (35%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 492 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 548

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 549 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 604

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R       A L +  LP+   V S        EK+SKS  N +DP E+I
Sbjct: 605 ADVELTFDDKGRP----ISAVLKADGLPV---VISGT------EKMSKSKNNGVDPQELI 651

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 652 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 705

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 706 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 758

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 759 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 812


>gi|256819432|ref|YP_003140711.1| isoleucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581015|gb|ACU92150.1| isoleucyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 1135

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 94/268 (35%), Gaps = 10/268 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y             +PAD    G D     F+ ++
Sbjct: 596 KPMHRETDLIDVWFDSGSMPYAQWHYPFENKEFIDNHTAYPADFIAEGVDQTRGWFYTLH 655

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     V +   +   G+K+SK LGN +DP   I E G DA R++++    
Sbjct: 656 AIATSVFDSVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFTTIAEYGADATRWYMISNAN 715

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D +G+ + V       + N  S        D   Y           E D  IL
Sbjct: 716 PWDNLKFDLEGVAE-VRRKFFGTLYNTYSFFALYANTDSFTYAEADIPLAERPEIDRWIL 774

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + +++E+     +    RA   +   V E   + Y    +    K            
Sbjct: 775 SELNTLIKEVDALYADYEPTRATRAISDFVQENLSNWYVRLSRRRFWKGEYEADKIAAYQ 834

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A L+    P  A++++  L
Sbjct: 835 TLYTCLITIAKLMAPVAPFYADRLYKDL 862



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 52/160 (32%), Gaps = 19/160 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
                      N  P I H     I D+  R+    G  V    G D HG  +    +  
Sbjct: 40  PFVFFEGPPSANGVPGIHHVMARSIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGVEKE 99

Query: 66  -----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
                                K  V + +  + D+ + +   +  DD   T + ++ ++ 
Sbjct: 100 LGITKEDIGKKISVEDYNKACKEAVMRYTDIWNDLTEKIGYWVDMDDPYITYKPKYMESV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             L K++ +K  +YKG     YS +     +  E+ +   
Sbjct: 160 WWLLKQLYNKQLLYKGYTIQPYSPKAGTGLSSHELNQPGC 199


>gi|325131536|gb|EGC54243.1| leucyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139210|gb|EGC61756.1| leucyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325141589|gb|EGC64055.1| leucyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197607|gb|ADY93063.1| leucyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 876

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 6/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA
Sbjct: 31  SKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y
Sbjct: 91  MKNNVAPAAWTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++ Y ++LL+  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           +    +   ++           G+   
Sbjct: 207 DKLEHWPEQVKTMQRNWIGKSRGMTVR 233



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 126/360 (35%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 490 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 546

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 547 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 602

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R       A L +  LP+   V S        EK+SKS  N +DP E+I
Sbjct: 603 ADVELTFDDKGRP----ISAVLKADGLPV---VISGT------EKMSKSKNNGVDPQELI 649

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 650 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 703

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 704 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 756

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 757 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 810


>gi|281422107|ref|ZP_06253106.1| valine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403896|gb|EFB34576.1| valine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 893

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/392 (15%), Positives = 132/392 (33%), Gaps = 58/392 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L           P + +N         +KD  +SR+   
Sbjct: 365 PIEPKLSTQWFLKMQHFADIALPPVMDDDIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 422

Query: 216 WGIKIP-------------------------------------DDPQYIMYVWIDALTNY 238
           WG +IP                                     +     +  W  +    
Sbjct: 423 WGHRIPAYYFDNAGKKDFVVAETAEEALKLAQEKNANIKAEDLEQESDCLDTWFSSWLWP 482

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    +++PD  +   ++P    V G DI+ F    +    +     +P     F+   
Sbjct: 483 ISLFDGIEHPDNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGKMPFKHVYFTGIV 542

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+   ++  N    
Sbjct: 543 RDKLGRKMSKSLGNSPDPLVLIDKFGADGVRMGMMLSAPAGNDILFDESLCEQGRN---- 598

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
               N +  +  ++       I  P +   + +   +    V +E+++  ++  I  AL 
Sbjct: 599 --FNNKIWNAFRLVKGWETADIEQPKSAEIAVKWFDAKLKEVNEEMQKQFKDYRISEALM 656

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY----VTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    W L+   P     +       T+     L  +L  F+P +  
Sbjct: 657 TVYKL------FWDEFSSWYLEMVKPAYGQPIDQKSYDATLRFFDVLLKMLHPFMPFITE 710

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           +++  ++   +          +       +  
Sbjct: 711 ELWQHIYDRKDGESIMREKLDIPAPTAEEQKL 742



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T ++    
Sbjct: 92  VNRLAQQGIKKTDLTREEFLKHAWDWTHEHGGIILKQLRKLGASCDWDRTAFTMDETRSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
               ++  +  KG IY+G     +  + +   +D+EV    +
Sbjct: 152 AVIHVFCDLYQKGLIYRGVRMVNWDPKAQTALSDEEVIYKDE 193


>gi|194866776|ref|XP_001971943.1| GG15248 [Drosophila erecta]
 gi|190653726|gb|EDV50969.1| GG15248 [Drosophila erecta]
          Length = 870

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 5/188 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA
Sbjct: 60  SKDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y
Sbjct: 120 NQRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    D++V          A+   V+      +F R SAY  +LL   
Sbjct: 180 QNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLRQWFIRTSAYAKQLLDGL 236

Query: 181 ESHPEFIL 188
           E       
Sbjct: 237 EDPTLRDW 244



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 115/399 (28%), Gaps = 95/399 (23%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+      +S         +   +    G K 
Sbjct: 395 KLQDWLISRQRYWGTPIPIVHCRKCGAVPVPEEQLPVSLPPKDSPQEAFLCECPKCGEKD 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      ++          KF P DL++ GK+    H  Y  
Sbjct: 455 ARRETDTMDTFVDSSWYYLRYLDAQNSERIFDPALTNKFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFLLSAN--------LPLPKKVFSHGFI-------------------------------- 296
                 +         P  + +     +                                
Sbjct: 515 FMNHFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYVPESEVDIVNAKKNQAVLKE 574

Query: 297 -----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                +   EK+SKS  N ++P ++  E G D  R  ++ ++A      +          
Sbjct: 575 TKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLIILADVAPTSHRNWSSATF----- 629

Query: 352 ADLANGIGNLVSRSVSMILKDYD--------GMIPTPGAFTESDESILSVCSRVLQEIRE 403
                GI N   R    +    +         ++PT   F   D  +    +  ++    
Sbjct: 630 ----PGILNWQKRLWLTLQDFQEAREDPTASDVVPTSEEFLAEDSKLFDARNFYVKGATF 685

Query: 404 NMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA--- 459
           N +  Q +  A++++  L +             L++T       VL    +  R LA   
Sbjct: 686 NYRHAQQLSVAISKMQGLTN------------SLRRTP----KHVLRHGKQFERALAAQI 729

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           I+L    P  A++++           F S+  RL P   
Sbjct: 730 IMLAPMAPHFASELWSK---------FVSIPGRLNPASQ 759


>gi|327295849|ref|XP_003232619.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464930|gb|EGD90383.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 973

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 12/261 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y+     YP+   H+GH     I+DVLARF+++ G DVL   G D  G     A
Sbjct: 72  SSKEKTYVLPMFPYPSGTLHMGHVRVYTISDVLARFNQMKGYDVLHPMGWDAFGLPAENA 131

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + + +QN  N R+    L I   +D  ++T     +   + L+  + +KG  
Sbjct: 132 AIERGIHPEGWTNQNITNMRNQLKDLGIRFDWDTEVKTCSPEFYKHTQKLFLMLHEKGLA 191

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  E + +FFR++A+++ LL  
Sbjct: 192 YQAEAVVNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRELKQWFFRITAFKEALLKD 248

Query: 180 YE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY-VWIDA 234
            +    S P+ IL ++R    +   +  L   +LS       I++       ++ V   A
Sbjct: 249 LDSLSGSWPDRILTMQRH--WLGKSRGALVPFTLSIPGETLDIEVFTTRPDTLHGVQYIA 306

Query: 235 LTNYLTTTGYLDNPDGSKAKF 255
           L+        +        KF
Sbjct: 307 LSTSHPVVKKMAANTPELQKF 327



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KR 349
           +        EK+SKS  N +DP   I+  G DA R  ++      +   +D+  +   +R
Sbjct: 663 TQIPANISFEKMSKSKYNGVDPNTCIKSYGADATRAHVLFSAPVSEVLEWDETKIVGIQR 722

Query: 350 VNADLANGIG---NLVSRSVS-----MILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             + +   +    N + R+        +L      +P  G  TE++ ++L + +  +  +
Sbjct: 723 WFSRIWKAVEDTGNSLKRANFSSAPDALLSLNGMALPPLGKLTETESNLLLMTNNTISSV 782

Query: 402 RENMQNQLIHRALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLA 459
              ++       L  VI  L+   +     Q P E  KT+  ++ T L+ T+ + +  L 
Sbjct: 783 SYCLEKNQYG--LNTVISDLIKLTNAIAAVQLPEESSKTSSAQSLTSLHTTLYISLNSLL 840

Query: 460 ILLQAFVPKLANKIFDIL 477
            +L    P  A++ +++L
Sbjct: 841 RMLAPIAPAFASECWEVL 858


>gi|299135641|ref|ZP_07028825.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601765|gb|EFI57919.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 920

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 108/341 (31%), Gaps = 35/341 (10%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
             K +  +    +                +              G         ++  W 
Sbjct: 400 WMKNIHDWCISRQLWWGHRIPAWHCGDCGAINVSRETPTDCTKCGGAKLVQETDVLDTWF 459

Query: 233 DALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
            +     T  G+  +       A F+P  L V G DIL F    +         ++P+P 
Sbjct: 460 SSGLLPFTVFGWDGSDKLTPDLAAFYPTQLLVTGFDILFFWVARMIMLGCHFMLDVPMPD 519

Query: 289 -------------KVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                        +V+ H  +     +K+SK+ GNVIDPIEV+ + G DA+R+ L  + +
Sbjct: 520 GSQRSLADAVPFREVYIHALVRDADRQKMSKTKGNVIDPIEVVTKYGTDAVRFTLASQAS 579

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------------PGA 382
            G D  + +   +       AN I N        I +  +                 P  
Sbjct: 580 PGTDIAFSEARTEG--YRSFANKIWNAARFLQMQIERGREAGYKVSLGAHDSLSLELPEQ 637

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK-PWELKKT 439
                  I +  S V  ++  ++ +     A   V         D Y +  K   E    
Sbjct: 638 TPLETRWIFARLSTVCADVERSLADYRFDEAANAVYQFFWGEFCDWYLELVKLRLEFTGE 697

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             D  +  L   V V      LL  F+P +  +++  L+ +
Sbjct: 698 KNDVTALTLGALVSVFEAALRLLSPFMPFITEELWHALYAS 738



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 23/158 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDE----------- 53
           +             + H+GH       D+L R+HR+ G   ++  GTD            
Sbjct: 41  KTFVQLLPPPNVTGRLHMGHMLNQTEMDILTRWHRMRGDTSVWVPGTDHAGIATQMMVER 100

Query: 54  ----HGQKIAKAAQNAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                G    +       T +V+  +       +   R +   +D S + F  T ++R  
Sbjct: 101 QLAAEGTTTRQQLGREAFTERVWKWKEQYGGAITDQMRRLGASVDWSREYF--TMDERLS 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              +  + ++ ++G IY+G Y   +  + +   +D EV
Sbjct: 159 RAVKESFVRLYEQGLIYRGAYIVNWDPQIQTAVSDLEV 196


>gi|253995630|ref|YP_003047694.1| valyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982309|gb|ACT47167.1| valyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 962

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 89/384 (23%)

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------- 221
           L    S      P    N   +   + ++D  +SR+   WG +IP               
Sbjct: 408 LDVVASGEIKFYPENWVNT-YNQWLNNIQDWCISRQ-LWWGHQIPAWYSDDGKVYVAHDE 465

Query: 222 ----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGS-----KAKFWPADL 260
                                ++  W  +     +T  +  + +         ++ P+ +
Sbjct: 466 AEAKAQAAKDGYSGNLKRDDDVLDTWYSSALWPFSTLDWSGDAEKDAANVALQQYLPSSV 525

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            V G DI+ F    +      ++  +P             +G+K+SKS GNV+DPI++I+
Sbjct: 526 LVTGFDIIFFWVARMVMMTTHITGKIPFKHVYVHGLIRDAEGQKMSKSKGNVLDPIDLID 585

Query: 319 E-------------------------------------VGVDALRYFLVREIACGKDGFY 341
                                                  G DALR+      + G+D  +
Sbjct: 586 GIGLDDLIKKRTTGLMNPKDAEKIEKRTRKEFPEGINAYGTDALRFTFAALASPGRDIKF 645

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG------AFTESDESILSVCS 395
           D          +  N + N  +R V M  +  D              F+ +D  I+S+  
Sbjct: 646 DLQRCDG--YRNFCNKLWN-ATRFVLMNTEGQDNGFGIGSCVEGGRVFSAADRWIVSILQ 702

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           R   E+    ++     A   +   V +   D Y +  K         ++  T     + 
Sbjct: 703 RTEAEVERAFEDYRFDLAAKAIYEFVWDEYCDWYLELAKVQMQNGNEAEKIGT-RRTLLR 761

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  +  L    +P +  +I+  +
Sbjct: 762 VLETILRLAHPIMPFITEEIWQTI 785



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 62/175 (35%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           +++   I           H+GH +   + D L R+HR+ G + L+  GTD  G       
Sbjct: 47  KQDNFCILLPPPNVTGTLHMGHGFNQTLMDALTRYHRMRGDNTLWQPGTDHAGIATQIVV 106

Query: 60  ----------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K +     ++  R +    D S + F  T +   
Sbjct: 107 ERQLDAQGVSRHDLGREKFLEKVWEWKEYSGGTITKQMRRLGTSPDWSRERF--TMDAGL 164

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +      + ++ ++G IY+G     + ++     +D EV +  +  +    + P+
Sbjct: 165 NKVVTETFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQEEEDGFMWHINYPL 219


>gi|111115567|ref|YP_710185.1| valyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|110890841|gb|ABH02009.1| valyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 875

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 156/414 (37%), Gaps = 48/414 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + + +    + ++ +  K   +K          ++ +    + ++   G  Y +  
Sbjct: 295 ILTQDGKLNKNVPLQYQGLKMKDARFKIEIELM----EKGFLQGVKKHRQQVGHCYRSG- 349

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             V+      +F  +    DK L   E+      P +  N    +  S ++D  +SR+  
Sbjct: 350 EVVEPYLSTQWFVSMKPLADKALKALENGELRFYPKKWENT-YKYWLSNIRDWCISRQLV 408

Query: 215 DWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
            WG +IP                              DP  ++  W  +     ++ G+ 
Sbjct: 409 -WGHRIPAWYNIDTSEVVVSETDPSLDEKNAGKRFVQDPD-VLDTWFSSWLWPFSSLGWP 466

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +  D     ++P +  +   DI+ F    +       +  +P      +      +G+K+
Sbjct: 467 NITD-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQIPFKDVYITPLLRDKQGKKM 525

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+++I E G D+L + +      G+D   D       + A  AN + N  S
Sbjct: 526 SKSLGNGIDPLDIIHEYGSDSLHFTISFLSVQGQDLNIDSKDFM--LGAKFANKVFN-AS 582

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           + + + +K+    I     F + D+ +L+  +  +  +  +  N   + A   V      
Sbjct: 583 KFILLNIKN--RKILNDLEFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWN 640

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+ 
Sbjct: 641 DFCDWYIEISK-IDLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIYS 693



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           +K  +           H+GHA   ++ D+L R+ R+   + L+  GTD  G       + 
Sbjct: 36  KKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFER 95

Query: 64  --------NAGVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +    L  SYD      T +       
Sbjct: 96  HLKNIGKSKNDYEREELVQEIFKLKDKHRGVIVNQIKKLGASYDHTRERFTLDDSLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|258542335|ref|YP_003187768.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633413|dbj|BAH99388.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636472|dbj|BAI02441.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639525|dbj|BAI05487.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642581|dbj|BAI08536.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645636|dbj|BAI11584.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648689|dbj|BAI14630.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651742|dbj|BAI17676.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654733|dbj|BAI20660.1| valyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 897

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 124/346 (35%), Gaps = 13/346 (3%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P QW  E  +F  +   Q   +S        I      +E +          + +   + 
Sbjct: 400 PKQW--ENTFFAWMRDIQPWCISRQLWWGHRIPAWYGPDEHVFVAHDDADAQAQANAHYG 457

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
             +++  D   ++  W  +     +T G+ D      A+++P D+ V G DI+ F    +
Sbjct: 458 KPVELRRDED-VLDTWFSSALWPFSTLGWPDKTP-ELARYYPTDVLVTGFDIIFFWVARM 515

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                    ++P              G+K+SKS GN IDP+E+I++ G DA+R+ +    
Sbjct: 516 MMMGQHFMHDVPFRNIFIHGLVRDEHGQKMSKSKGNGIDPLELIDQYGADAMRFTICALT 575

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G+D    +  ++          + N         +K  +G  P     +     I++ 
Sbjct: 576 GIGRDVKLGRKRVED--YRAFITKLWNAARFCEMNGVKPVEGFDPA-TVKSPLGRWIIAE 632

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  + E    + +             V     D + +  KP     T+   A+ +  V 
Sbjct: 633 AAAAITEATRALDSYRFDEYALSCYRFVWNRFCDWFLEFAKP-VFNSTDEAEAAEIRAVA 691

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLKPG 496
             V+  +  LLQ  +P + + ++      +E      S  + + P 
Sbjct: 692 AYVLGVILRLLQPVIPFVTDTLWHSFGYGEEGSLISASWPEPVVPA 737



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           H+GHA  M + D L R+ R+ G D L+  GTD  G      
Sbjct: 31  SGKKPFTIMIPPPNVTGTLHMGHALTMTLQDTLIRWKRMQGFDTLWQPGTDHAGIATQMV 90

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +    T                   + +Q+          L  S D      T ++   
Sbjct: 91  VERTLATEGKTRQEMGRDAFIERVWEWKEQSGGGITKQLRRLGASLDWPRERFTMDEGLS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              R ++  + ++G IY+      +     +  +D EV              PV+
Sbjct: 151 RAVREVFVTLYNEGLIYRDRRLVNWDPVFRSAISDLEVESKDVAGNLWYIRYPVE 205


>gi|91205126|ref|YP_537481.1| leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990937|sp|Q1RJS2|SYL_RICBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91068670|gb|ABE04392.1| Leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 831

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 23  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVVARFMTMQGFNVLHPMGWDSFGLPAENA 82

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 83  AIKNNSHPKEWTYSNIENMKKQLKSMGFSYDWSREINSCDPDYYKHEQKFFLELYERNLA 142

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+    + +F +++ Y ++LL+ 
Sbjct: 143 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRYLKQWFLKITNYAEELLNE 198

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
             +  E+   +    E       G
Sbjct: 199 IPNLTEWPEAVRSMQEKWIGKSVG 222



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 124/398 (31%), Gaps = 35/398 (8%)

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           RT   R  D      +       I      G   + D             DG      ++
Sbjct: 400 RTINYRLKDWGISRQRFWGCPIPIIHCDSCGLVPVPDSDLPVTLPDDVKFDGHGNPLDNH 459

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W           A ++           +       ++ +        D  L    + 
Sbjct: 460 PT-WKHVNCPKCSKPAIRETDTFDTFFESSWYFTRYCNSQALEMTDKKACDYWLPVDKYI 518

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            GI+       +M++        +       +        +   + +        +   +
Sbjct: 519 GGIEHA-----VMHLLYARFFTKVMNEQDYVSVREPFKGLFTQGMVLHATYKDEHNNWLY 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           P  ++        K         + EK+SKS  N+ID   + ++ G DA+R+F++ +   
Sbjct: 574 PEEVIKKGNEFFHKENGGLVTQGRIEKMSKSKKNLIDLETMQQQYGADAIRFFVLSDSPP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +   G++    A   N +  +    + +                 +++ +  +  
Sbjct: 634 EKDLEWSASGIEGS--ARFINKLEQMQETIIKL------------SDNKNTNKELKRLIH 679

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             ++ + E++++  ++RA+A++  L + +          E+ K   D     +       
Sbjct: 680 FTIKHVAEDIKHFALNRAIARMRELFNAISS--------EINKEEID-----VQNAKHGF 726

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
             L  LL  F+P +  +I+  L       N  F + D+
Sbjct: 727 NVLIQLLNPFIPHITEEIWQKLGHKTFLYNAAFPTFDE 764


>gi|325123256|gb|ADY82779.1| valyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 965

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 140/408 (34%), Gaps = 95/408 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 438 GHRIPAWYDANGNIYVGRNEEEVRAKNNIAAYVELKQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------V 290
           +     A  +     P D+ V G DI+ F    W A ++   L   K            V
Sbjct: 498 DAQKDAANDFLKTFHPTDVLVTGFDIIFF----WVARMIMMTLHFMKNEDGSSQVPFKTV 553

Query: 291 FSHGFILH-KGEKISKSLGNVIDPIEVIEE------------------------------ 319
           + HG +   +G+K+SKS GNV+DP+++I+                               
Sbjct: 554 YVHGLVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKE 613

Query: 320 -------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
                   G DA+R+        G+D  +D   ++     +  N I N     +  +   
Sbjct: 614 FPEGINAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQ 671

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
             G    P  +   ++ I+S   +    + +      +  A   +   +     D Y + 
Sbjct: 672 TVGQQARPDLWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVEL 731

Query: 431 QKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KP     + + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 732 TKPVLNDAEVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 779



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGITRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|315638950|ref|ZP_07894121.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480979|gb|EFU71612.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 870

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 87/499 (17%), Positives = 158/499 (31%), Gaps = 76/499 (15%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           + G  + K      +       ++   F  + D   I  +                    
Sbjct: 262 DFGTGVVKVTPAHDMNDYEVGLRHHLEFLSVFDEKGILNEH------------------C 303

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +   G              +   + +          Y    +N V+    + + F     
Sbjct: 304 LEFMGLERLEAREKIVQKLENLGFIEKIEEHHNQVGYCYRCNNIVEPYISKQW-FVKKEI 362

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------ 220
             K +     +     P    N   +     L+D  +SR+   WG +I            
Sbjct: 363 AQKSIEKVALNKTQFYPSHWVN-SFNAWMRDLRDWCISRQ-LWWGHQIPVYYCECGCEWA 420

Query: 221 ----------------PDDPQYIMYVWIDALTNYLTTTGY--------LDNPDGSKAKFW 256
                             DP  ++  W  +    ++T G+            +    +F+
Sbjct: 421 SEDTPKSCPKCGSTNFHQDPD-VLDTWFSSGLWAMSTLGWGNKDWGKDQFWFEKDLREFY 479

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPI 314
           P  L + G DIL F          +A   LP K ++ H  +  + G K+SKSLGNVIDP 
Sbjct: 480 PNSLLITGFDILFFWVARMMFQSTNALEELPFKHIYLHALVKDEQGRKMSKSLGNVIDPN 539

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E I+    D LR+ L      G+D    +D L +  N    N I N  +  +    K  D
Sbjct: 540 ESIKTYSADILRFTLALLAVQGRDIKLSEDKLLQVRN--FTNKIYNATNYLLLNENKFED 597

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
               T    +E  + I +     L+++REN++N   + A   +         ++D    W
Sbjct: 598 LENITIQ--SELAKFIDAKFQECLKQVRENLENYRFNDAANYLYRF------FWDDFCDW 649

Query: 435 --ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
             EL K        +  +  E ++     L  F+P ++   +  L  ++       +   
Sbjct: 650 GIELSKAQKSSVKELGSIFKEALKA----LHPFMPFISEYTYHKLSGSELENSASIMISA 705

Query: 493 LKPGFMLHKTFDPIFPRFL 511
                   +  + IF   +
Sbjct: 706 YPNLGNKDEKIERIFSLLI 724



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I           HIGHA    + D++ R+ R+DG   L+  G D  G      
Sbjct: 30  KEGKNFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMDGYKTLYQPGLDHAGIATQNV 89

Query: 62  AQN--------------AGVTTKVFVD------QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+        +     R +      S   F  T +  
Sbjct: 90  VEKQLLAQGITKEELGREKFIEKVWEWKEQSGGKILEQMRTLGITPAWSRLRF--TMDDG 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             +  +  + K+ D+  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 148 LANAVKKAFVKLYDEKLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|153807681|ref|ZP_01960349.1| hypothetical protein BACCAC_01963 [Bacteroides caccae ATCC 43185]
 gi|149130043|gb|EDM21255.1| hypothetical protein BACCAC_01963 [Bacteroides caccae ATCC 43185]
          Length = 878

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 135/392 (34%), Gaps = 61/392 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNT-YRHWMENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       +  +  W  +    ++
Sbjct: 410 GHRIPAYFLPEGGYVVAATPEEALAKAKEKTGNAALTMEDLRQDEDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +     +P     F+     
Sbjct: 470 LFDGINNPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGQMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+E+I++ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KLGRKMSKSLGNSPDPLELIDKYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILK--DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             N +  +  +I    + +G IP P     + +           E+ +      +  AL 
Sbjct: 584 FCNKIWNAFRLIKGWTNAEGSIPVPEDAHLAVQWFEQRLDAASVEMADLFSKYRLSEALM 643

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQLAILLQAFVPKLAN 471
            V  L      ++D    + L+   P         +  + +    +L  LL  F+P +  
Sbjct: 644 LVYKL------FWDEFSSYLLEIVKPAYGQPINGFIYSMVINCFERLLELLHPFMPFITE 697

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           +++  L   +       +  RL   F +++ F
Sbjct: 698 ELWQQLRQREPGASL--MVTRLSETFEVNEKF 727



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  SREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + D++          L  S  +D    T +++  +
Sbjct: 92  VNKLAAQGIKKTDLTRDEFLKHAWEWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLYYLRYKVE 205


>gi|47570442|ref|ZP_00241078.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47552900|gb|EAL11315.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 120

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/117 (46%), Positives = 78/117 (66%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  YI+T I YP+ + HIGHAY  +  D +AR+ R+ G +V + TGTDEHGQKI K 
Sbjct: 3   EENKSFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYLTGTDEHGQKIQKK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
           A+   VT + +VD      +++ + +DISYDDFIRTTE RH D    ++K++ D+GD
Sbjct: 63  AEELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGD 119


>gi|299771580|ref|YP_003733606.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701668|gb|ADI92233.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 874

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 91/238 (38%), Gaps = 12/238 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                 +   +           +G++    S  T     +I  D   +     D L  
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGMEITFPSANT-----EIYTDGLTVYTTRADTLMG 264



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R     + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVAGFLEKGNSASTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL+ F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----IAVEREAITTLLTLLEPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDVTAATFPEVD 807


>gi|294649289|ref|ZP_06726724.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824842|gb|EFF83610.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 874

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLKDGWPQQVLTMQRNWIGRSTGM 236



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPSDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R +   +       +      ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLAAGFLETGNQTTVIDTANLSKDAQDLRRKTHETIQKVGDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D A     V  E I  L ILL  F P L+  +     
Sbjct: 749 ELLNATNKF--------EAKDDNDAA-----VAREAITTLLILLAPFAPHLSQTLLTQFG 795

Query: 479 VADENRCFQSLD 490
           +      F  +D
Sbjct: 796 MDLIAVEFPQVD 807


>gi|187932895|ref|YP_001884347.1| isoleucyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721048|gb|ACD22269.1| isoleucine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 1042

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 145/429 (33%), Gaps = 14/429 (3%)

Query: 72  FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK-GDIYKGCYSGWYSL 130
           +  +  +   D         +   +T   RH  +    W+  +       +  +    SL
Sbjct: 360 WAGKFVKKCDDSICKWLEENNKLFKT--ARHLHSYPHCWRCDTPLLYYPKESWFVRMTSL 417

Query: 131 RDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEG--YFFRLSAYQDKLLSYYESHP 184
           RD+   N++++    D    G++     N + W       +   L  ++ +         
Sbjct: 418 RDKLLENNNKINWCPDNIRTGRFGKFLENVIDWGISRDRYWGTPLPIWECECGHKECIGS 477

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
              L  +  N             ++  K    G ++    + ++  W D+ +       Y
Sbjct: 478 IAELKEKGINVPEDIELHKPYIDNVHLKCAHCGKEMKRTKE-VIDCWFDSGSMPFAQLHY 536

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PA       D     F+ +   +  +    P    +     +  KG K
Sbjct: 537 PFENKELFEQNYPAQFISEAVDQTRGWFYTLLAISTAVFDRNPFENCIVLGHVLDKKGLK 596

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP EV+   G DA R+      A      +  D + +     L+       
Sbjct: 597 MSKSKGNVVDPFEVLSSQGADATRWHFYTASAPWLPTRFSTDDVGESQRKFLSTLWNVYS 656

Query: 363 SRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
              +   +  ++ +  T   +    D+ I+S  + +++ + E + +  I  A   +    
Sbjct: 657 FYVLYAEIDSFNPLEYTDFKSENVMDKWIMSKLNTLIKTVDEKLNSYDITAAALSIEEFT 716

Query: 422 SEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            E+ + Y    +     +T  D           V+  L+ +   FVP +  +I+  L V 
Sbjct: 717 DELSNWYVRRNRSRYWTETINDDKIGAYVTLYRVLVTLSKVAAPFVPFITEEIYQNLVVN 776

Query: 481 DENRCFQSL 489
            +N   +S+
Sbjct: 777 LDNTAEESI 785



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +    +         
Sbjct: 53  PPTANGKPHVGHILTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKE 112

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCRILWKKI 113
                         K  V      +  M + +    D      T    + ++     K++
Sbjct: 113 QIEEYGVEKFVKECKESVFTYVSMWEKMTEQIGYWVDMEHPYVTYHNPYIESVWWALKQM 172

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +Y+G     Y  R     +  EV +G  
Sbjct: 173 WDKELLYEGHKVMPYCPRCGTALSSHEVAQGYK 205


>gi|114799286|ref|YP_762228.1| leucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123128248|sp|Q0BWB5|SYL_HYPNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114739460|gb|ABI77585.1| leucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 855

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 78/202 (38%), Gaps = 6/202 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K ++     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA  
Sbjct: 36  PKAFVLEMFPYPSGRLHMGHVRNYAMGDVVARHKRAKGYNVLHPMGWDAFGMPAENAAME 95

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +   N  + +     L +S D      T +  ++   + L+ K+ DKG +Y+ 
Sbjct: 96  RKVHPGKWTYANIESMKAQFRKLGLSLDWSREFATCDPDYYGAQQALFLKLMDKGLVYRK 155

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     +++V  G           PV+  E   +FF+++AY D LL   + 
Sbjct: 156 ASKVNWDPVDNTVLANEQVIDG----RGWRSGAPVEQRELTQWFFKITAYADDLLEAVQK 211

Query: 183 HPEFILPIERRNEVISFVKSGL 204
              +   +            GL
Sbjct: 212 LERWPEKVRTMQANWIGRSEGL 233



 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 68/411 (16%), Positives = 124/411 (30%), Gaps = 88/411 (21%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + E   N      G   Q Y     PV   E+ G     +A     L    +      P+
Sbjct: 419 QGEGKVNYRLRDWGVSRQRYWGCPIPVVHCEDCGVVGVPAADLPVRLPEDVTFDVPGNPL 478

Query: 191 ERR--NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           +R    + +   K G      +                 +  ++D  +++        + 
Sbjct: 479 DRHPDWKHVDCPKCGKPARRET---------------DTLDTFVD--SSWYYARFASVSD 521

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAF----------LLSANLPL----PKKVFSHG 294
              +A + P D ++ G +    H +Y   F           L +  P      + + +H 
Sbjct: 522 PEERAYWLPVDQYIGGVEHAVLHLLYSRFFSRAMRDVGELDLPSGEPFAGLFTQGMVTHE 581

Query: 295 FILHKG------------------------------EKISKSLGNVIDPIEVIEEVGVDA 324
               +G                              EK+SKS  N +DP  ++   G D 
Sbjct: 582 TYRSEGGTWLEPSAVERKDGQVFEIATGKPVKVGAIEKMSKSKKNTVDPDAIVATYGADV 641

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            R+F++ +    +D  + + G         A G    V R  S +    +          
Sbjct: 642 ARWFVLSDSPPERDVEWTQSG---------AEGAARFVQRVWSFVDSLPETGPFPAPGSD 692

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           +   ++     + +  I   ++    + A+A +   V+             LKKT  D A
Sbjct: 693 DVSTALRKSNHKAVAAIDRAIEEFRFNSAIATIHEWVNA------------LKKTESDPA 740

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
              L    E    LA  L  F+P LA   ++ L          +  +D  L
Sbjct: 741 --TLGARAEGADMLARCLVPFMPHLAEACWERLGQTSLVSQAMWPKIDASL 789


>gi|317502694|ref|ZP_07960806.1| valine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315666180|gb|EFV05735.1| valine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 898

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 124/365 (33%), Gaps = 51/365 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    S      P + +N         +KD  +SR+   
Sbjct: 365 PIEPKLSTQWFLKMQHFADLALPPVMSDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 422

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     +  W  +   
Sbjct: 423 WGHRIPAYYFMNADGKRDCVVAETEEAALEKAKAKNCNLELKDLEQESDCLDTWFSSWLW 482

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    ++NP+  +   ++P    V G DI+ F    +    +      P     F+  
Sbjct: 483 PISVFDGINNPNNKEIDYYYPTSDLVTGPDIIFFWVARMIMAGYEYRKTYPFKHVYFTGI 542

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 543 VRDKLGRKMSKSLGNSPDPLMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 599

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++       I  P     + E   +   +V  E++E  +   I  AL
Sbjct: 600 ---FNNKIWNAFRLVKGWKTADIEQPECNALAVEWFDAKLKQVNIELQEQFKQYRISEAL 656

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  L  +     Y +  KP  L              T+     L  +L  F+P +  +
Sbjct: 657 MTVYKLFWDEFSSWYLEMIKPTYLNGEAQPIDHKTYEATIGFFDNLLKMLHPFMPFITEE 716

Query: 473 IFDIL 477
           ++  +
Sbjct: 717 LWQHI 721



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRHARMEGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        +  ++          L  S  +D    T ++    
Sbjct: 92  VGKLAEKGIKKTDLSREKFLEHAWDWTHEHGGIILKQLRKLGCSCDWDRTSFTMDETRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + DKG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYDKGLIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|289581377|ref|YP_003479843.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530930|gb|ADD05281.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 904

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I D  AR+ ++ G DVL   G D  G     AA++   
Sbjct: 51  YVLGMYPYPSGKLHMGHVRNYTITDAYARYRQMCGDDVLHPMGWDAFGLPAENAAKDRDT 110

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        RD    +   Y  D  I T    ++   + L+ +   +  + +    
Sbjct: 111 NPRDWTFDCIDTMRDQMRAMGFGYDWDREIATCTPEYYQWNQWLFSRFHQEDLVERRDAE 170

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V   A+         PV+  E E +F +++ Y D+LL   +    
Sbjct: 171 VNWCPECETVLADEQVEGEAE--LCWRCDTPVEQRELEQWFLKITEYADELLEDIDDLEG 228

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 229 WPNSVRQMQRNWIGRQYG 246



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 97/270 (35%), Gaps = 36/270 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y++        D ++A  W P D +V G +    H +Y   F   
Sbjct: 500 DTMDTFVDSSWYFLRYVSPDLEEAPFDLARANDWMPVDQYVGGIEHAVMHLLYSRFFTKV 559

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L    P    + + G +   GEK+SKS GN + P  ++EE G D  R F+++  
Sbjct: 560 LADHEGLEHREPFT-NLLAQGMVQLDGEKMSKSKGNTVSPQRIVEEYGADTARLFMMQAA 618

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  + ++G++              ++R   M+ +D+    P  G    +   + + 
Sbjct: 619 QPERDFDWSEEGVRSTNA---------FLTRLKEMV-EDFATEQPA-GEDDATARYVANE 667

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
               +        +   +RAL +   LV  + +Y    +P                 T E
Sbjct: 668 IDATIAIAGGEYDDLTFNRALRETQDLVQTLRQYAAYTEP--------------HAETYE 713

Query: 454 -VIRQLAILLQAFVPKLANKIFDILFVADE 482
             +  +  LL    P LA +++  L   ++
Sbjct: 714 RGLSAVVRLLAPVAPHLAEELYAELDTGED 743


>gi|76800799|ref|YP_325807.1| valyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|90101535|sp|Q3IUE5|SYV_NATPD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76556664|emb|CAI48235.1| valine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 872

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 120/370 (32%), Gaps = 54/370 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFR---------------LSAYQDKLLSYYESHPEFILPIERR 193
                  P++ + +E +F +                  +  + L  +    E+   I R+
Sbjct: 340 CCWRCDTPIEILSKEQWFVKVDQEEILETAQDIAWYPDHMYERLEEWTEGMEWDWVISRQ 399

Query: 194 NEV------ISFVKSGLKDLSLSRK--------------TFDWGIKIPDDPQYIMYVWID 233
                          G  +L+   +                + G         +M  W+D
Sbjct: 400 RVFATPIPAWECADCGHIELADESEVPVDPTNDEPAVGSCPECGSDDWVGETDVMDTWMD 459

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVF 291
           +  + L   G+ D          P  L   G DI+R  A Y       ++  +P  + + 
Sbjct: 460 SSISPLYVAGWPDETFE------PVQLREQGHDIIRTWAFYTILRTAAVTDEIPWEEALI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +       G K+SKS GN + P EV+EE   DA R  +      G D  +    +     
Sbjct: 514 NGMVFGDDGNKMSKSRGNFVQPEEVVEEHSADAFRQAMALGGQPGSDIQFQWKEVTS--- 570

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQL 409
              A+     +        +  D   P   A  + ++DE IL+ C+RV  E+ ++M    
Sbjct: 571 ---ASRFQTKLWNITKFASEHIDESTPDIEAPAYRDADEWILARCARVADEVADDMDEYR 627

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              AL  V   V     D Y +  K   L +  P       +     +     +L  F P
Sbjct: 628 FDSALRTVREFVWHDLADDYLELIK-GRLYEGRPGERKAAEHALFVSLSASLRMLSPFAP 686

Query: 468 KLANKIFDIL 477
            +  + +  L
Sbjct: 687 FITEEAWSHL 696



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 15/155 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +ER    I T   YP    HIG+A      D  AR+HRL G DVLF  G D HG      
Sbjct: 33  EERPDYIIDTPPPYPTGNLHIGNALGWCYMDYAARYHRLQGDDVLFPQGWDCHGLPTEVK 92

Query: 62  AQNAGV-------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +                       D+     ++    L  S  +D   RT +  +    
Sbjct: 93  VEENRDIHRTDVSREQFREWCVEHTDEQIAAMKETMRTLGFSQDWDHEFRTMDDSYWQET 152

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  + +++D   +Y+  +   +  R E    D EV
Sbjct: 153 QRSFLQMADSDYVYQDEHPVNWCPRCETAIADAEV 187


>gi|218680715|ref|ZP_03528612.1| leucyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 499

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 41  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 101 ERGVHPASWTYQNIGSMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 161 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 216

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 217 TLDQWPEKVRLMQKNWIGRSEGLTVRW 243


>gi|322371470|ref|ZP_08046019.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549002|gb|EFW90667.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 893

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y + Q H+GH     I D  AR+ R+DG +VL   G D  G     AA     
Sbjct: 37  YVLGMFPYTSGQLHMGHVRNYTITDAYARYKRMDGENVLHPMGWDSFGLPAENAAIERDT 96

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        R+  + +   YD    I T +  ++   + L+ +  ++G + +    
Sbjct: 97  NPRDWTLSCIDTMREQMEGMGFGYDWEREITTCQPDYYRWNQWLFTRFREEGLVEREAAE 156

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V   A+         PV+  E + +F +++ Y D+LL   +    
Sbjct: 157 INWCPSCETVLADEQVEGDAE--LCWRCDTPVEQRELDQWFLKITEYADELLDDLDDLDG 214

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 215 WPSNVRQMQRNWIGRQHG 232



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 109/345 (31%), Gaps = 46/345 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   EE G            L  +       L      + ++  + 
Sbjct: 428 WGISRQRYWGTPIPIIHCEECGPVSVPDEDLPVELPEFVRTTGNPLDAADEWKHVNCPEC 487

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G      +            D              Y++        D  +A  W P D +
Sbjct: 488 GADARRET------------DTMDTFMDSSWYFLRYVSPHLDDAPFDTEQADDWMPVDRY 535

Query: 262 VIGKDILRFHAIYWPA-------FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           V G +    H +Y            +  +      + + G +L  G+K+SKS GNV+ P 
Sbjct: 536 VGGIEHAVMHLLYSRFVTKVISDMDMLDHREPFTNLVTQGMVLLDGDKMSKSKGNVVSPQ 595

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            ++EE G D  R F ++     KD  + ++G+K          +  L     S     +D
Sbjct: 596 RIVEEYGADTARLFTMQAAQPEKDFDWTEEGVKSS-----YEFLQRLAGAVESFAESTFD 650

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                 G   E  E +       +    +  ++   + AL +   L S + RY +   P 
Sbjct: 651 ------GDRDEIAEYVEREIDATVAIANDEFESLTFNGALRETQELTSLLARYREETSP- 703

Query: 435 ELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILF 478
                           T+E  +R +  LL    P +  +++  L 
Sbjct: 704 -------------HGPTLERGLRTVVKLLAPVTPHICEELWSELG 735


>gi|251780267|ref|ZP_04823187.1| isoleucine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084582|gb|EES50472.1| isoleucine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 1036

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 130/383 (33%), Gaps = 11/383 (2%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGAD----GQYYNAQHNPVQWMEEEG--YFFRLS 170
               +  +    SLRD+   N++++    D    G++     N + W       +   L 
Sbjct: 398 YYPKESWFVRMTSLRDKLLENNNKINWCPDNIRTGRFGKFLENVIDWGISRDRYWGTPLP 457

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            ++ +            L  +  N             ++  K    G ++    + ++  
Sbjct: 458 IWECECGHKECIGSIAELKEKGINVPEDIELHKPYIDNVHLKCAHCGKEMKRTKE-VIDC 516

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           W D+ +       Y         + +PA       D     F+ +   +  +    P   
Sbjct: 517 WFDSGSMPFAQLHYPFENKELFEQNYPAQFISEAVDQTRGWFYTLLAISTAVFDRNPFEN 576

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +  KG K+SKS GNV+DP EV+   G DA R+      A      +  D + +
Sbjct: 577 CIVLGHVLDKKGLKMSKSKGNVVDPFEVLSSQGADATRWHFYTASAPWLPTRFSTDDVGE 636

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                L+          +   +  ++        +    D+ I+S  + +++ + E + +
Sbjct: 637 SQRKFLSTLWNVYSFYVLYAEIDSFNPLEYADFKSENVMDKWIMSKLNTLIKTVDEKLNS 696

Query: 408 QLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             I  A   +     E+ + Y    +     +T  D           V+  L+ +   FV
Sbjct: 697 YDITAAALSIEEFTDELSNWYVRRNRSRYWTETINDDKIGAYVTLYRVLVTLSKVAAPFV 756

Query: 467 PKLANKIFDILFVADENRCFQSL 489
           P +  +I+  L V  +N   +S+
Sbjct: 757 PFITEEIYQNLVVNLDNAAEESI 779



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +    +         
Sbjct: 47  PPTANGKPHVGHILTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCRILWKKI 113
                         K  V      +  M + +    D      T    + ++     K++
Sbjct: 107 QIEEYGVEKFVKECKESVFTYVSMWEKMTEQIGYWVDMEHPYVTYHNPYIESVWWALKQM 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +Y+G     Y  R     +  EV +G  
Sbjct: 167 WDKELLYEGHKVMPYCPRCGTALSSHEVAQGYK 199


>gi|226952885|ref|ZP_03823349.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836396|gb|EEH68779.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 874

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLKDGWPQQVLTMQRNWIGRSTGM 236



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R +   +       +      ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLAAGFLETGNQTTVIDTANLSKDAQDLRRKTHETIQKVGDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D A     V  E I  L ILL  F P L+  +     
Sbjct: 749 ELLNATNKF--------EAKDDNDAA-----VAREAITTLLILLAPFAPHLSQTLLTQFG 795

Query: 479 VADENRCFQSLD 490
           +      F  +D
Sbjct: 796 MDLTTVEFPQVD 807


>gi|325105255|ref|YP_004274909.1| Isoleucyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974103|gb|ADY53087.1| Isoleucyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 1131

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 112/294 (38%), Gaps = 22/294 (7%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G K+  +P  ++ VW D+         Y        AK +PAD    G D     F  ++
Sbjct: 579 GEKMFREPD-LIDVWFDSGAMPYAQWHYPFENQEEFAKAYPADFIAEGVDQTRGWFFTLH 637

Query: 275 WPAFLLSANLP--------------LPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEE 319
             A LLS   P                K V S+G +L K G K+SK LGN +DP   IE+
Sbjct: 638 TIAALLSECSPEIKAVNFENGNQGIAFKNVISNGLVLDKNGNKMSKRLGNAVDPFSTIEQ 697

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
              DA R++++   +   +  ++ +GL +                ++   +  +      
Sbjct: 698 YSADATRWYMISNASPWDNLKFNIEGLDEVRRKFFGTLYNTYAFFALYANIDGFKYSEAD 757

Query: 380 PG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
                  E D  I+S+ + + +E+ E  ++    +A   + + V E   + +    +   
Sbjct: 758 IDISKRPEIDRWIISLLNTLTKEVDEFYEDFEPTKAARSIQNFVDEHLSNWFVRLSRRRF 817

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            K    +   +        +  +A L+    P  ++++F+ L    +    +S+
Sbjct: 818 WKGDYSEDKISAYQTLYTCLETVAKLMSPIAPFFSDRLFNDLNSETDREKVESV 871



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 19/145 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +           N  P I H     I D+  R+  L G  V    G D HG  I  A 
Sbjct: 36  DSKPYTFFEGPPSANGMPGIHHVMARSIKDIFCRYKTLKGYQVKRKGGWDTHGLPIELAV 95

Query: 63  QNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTTEKRHH 103
           + +   TK  + +       N    +++    D            +  D+   T +  + 
Sbjct: 96  EKSLGITKEDIGKKISVEDYNEACRKEVMRYTDVWNDLTEKMGYWVDLDEPYITYKNDYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWY 128
           ++   + K++   G +YKG     Y
Sbjct: 156 ESLWWILKELHTAGFLYKGYTVQPY 180


>gi|309781281|ref|ZP_07676017.1| leucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308919694|gb|EFP65355.1| leucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 877

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+  ++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLGITKYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            ++          +   I   +
Sbjct: 212 LDALGWPERVKLMQQNWIGKSE 233



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 120/357 (33%), Gaps = 40/357 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  + N      G   +      +   +++   Y+ R +    K +     + 
Sbjct: 479 TGNPLAKDPRFLNCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDGKTMVD-ARND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    PAD+ V   +             + A L    +    G +    EK+S
Sbjct: 592 REDASGKKQWINPADVDVQTDE---------RGRPVGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   ++  G++    +     + N    
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWNDAGVEGA--SRFLRRLWNFGVA 696

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
               I   +   +      T++D ++      VL++   + +    +  ++  + +++ +
Sbjct: 697 HADAIRAGHGNGVVAGA--TDADRALRRELYTVLKQANYDYERLQYNTVVSATMKMLNAL 754

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                     E  K     A        E +  L  +L   VP + + ++  L  A 
Sbjct: 755 ----------EGAKDAGADAR------REGLGLLLRVLYPVVPHITHVLWTELGYAG 795


>gi|255318810|ref|ZP_05360036.1| valyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262378929|ref|ZP_06072086.1| valyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304066|gb|EET83257.1| valyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262300214|gb|EEY88126.1| valyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 963

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/405 (16%), Positives = 131/405 (32%), Gaps = 89/405 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +  + ++ +++      +   +      +P +  N +     + ++D  +SR+   W
Sbjct: 378 VEPLLTDQWYVKIAPLAKPAIEAVQDGRIKFVPEQYSN-MYMAWMNNIQDWCISRQ-LWW 435

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 436 GHRIPAWYDAEGNVYVGRDEAEVRAKNNIPADVQLDQDEDVLDTWFSSGLWTFSTLGWTG 495

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSH 293
           +    KA ++     P D+ V G DI+ F         +           +P        
Sbjct: 496 DEAKDKANYFLNTFHPTDVLVTGFDIIFFWVARMIMLTMHFMKNEDGTPQVPFKTVYVHG 555

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEE---------------------------------- 319
                +G+K+SKS GNV+DP+++I+                                   
Sbjct: 556 LVRDGEGQKMSKSKGNVLDPLDLIDGVDLETLVQKRTTGLMNPKQAAKIEKSTRKEFPEG 615

Query: 320 ---VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G DA+R+        G+D  +D   ++     + AN I N     +  +     G 
Sbjct: 616 IQAYGTDAVRFTFCALANTGRDIKFDMKRVEG--YRNFANKIWNATRFVMMNVEGQTIGS 673

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
                 +   ++ I+S   +  Q ++       +  A   +   +     D Y +  KP 
Sbjct: 674 EARQDLWELPEQWIVSRLQKAEQAVQTAFATYRLDLAAQAIYEFIWNEYCDWYVELTKP- 732

Query: 435 ELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L   N   +R + V  V + V+     L    +P L  +I+  L
Sbjct: 733 VLNDANVSDERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 777



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 22/171 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GH +   I D L R++R+ G + L+  GTD  G      
Sbjct: 35  EKGESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMSGKNTLWQPGTDHAGIATQMV 94

Query: 62  AQ-------------------NAGVTTKVFVDQNS-RNFRDMADVLDISYDDFIRTTEKR 101
            +                         K     N  R  R +   +D S + F  T +  
Sbjct: 95  VERQLAAQNISRHDLGRDKFIEKVWEWKEQSGGNITRQIRRLGSSVDWSRERF--TMDDG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             +  + ++ K+ ++G IY+G     +  + +   +D EV    +      
Sbjct: 153 LSNAVKEVFVKLHEEGLIYRGKRLVNWDPKLQTALSDLEVESVEEKGSLWH 203


>gi|329123476|ref|ZP_08252040.1| valine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327471058|gb|EGF16513.1| valine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 954

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 130/397 (32%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDVEGNVYVARNEEEVRSKYSLDSTVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGRPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            N  +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQ 766



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+    + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMCRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|47779360|gb|AAT38589.1| predicted leucyl tRNA synthetase [uncultured gamma proteobacterium
           eBACHOT4E07]
          Length = 801

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +REK Y  +   YP+ + H+GH     I DV++R+ R+   +V    G D  G     
Sbjct: 28  IDKREKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYKRMKNFNVFQPMGWDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V+ + + +QN  N +     L  SYD    +RT +  ++   ++++KK  D G 
Sbjct: 88  AAIANKVSPEDWTNQNIENMKSQLQSLGFSYDWSKELRTCDSSYYKWEQLIFKKFYDAGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +Y+      +   D+    +++V  G   +        ++  E + +F +++ Y D+LLS
Sbjct: 148 VYRKKSMVNWDPEDKTVLANEQVIDGKGWRSGAQ----IEIKEIDQWFIKITDYADELLS 203

Query: 179 YYESHPEFILPIERRNEVI 197
             E           +   I
Sbjct: 204 SLEELDWPENVKLMQKNWI 222



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/445 (14%), Positives = 141/445 (31%), Gaps = 70/445 (15%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                  G   H  +  + A+   +  K  +  N        + + I+ D F   + +  
Sbjct: 328 YGTGVVMGVPAHDSRDYEFAKKYNLNIKEVIQNNEEELPRTENGILINSDKFNGLSSEEG 387

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPVQWME 161
                    K+     + +     W   R   +     V     D +  +    PV+  +
Sbjct: 388 SKKIIEELIKLKSGKQLIQFRLRDWGVSRQRYWGCPIPVIYENGDPKVIDEIDMPVELPK 447

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            +     +   Q++     ++                                       
Sbjct: 448 LKKNSPPIPLSQNEDFINLDNSILR----------------------------------- 472

Query: 222 DDPQYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
                    ++D+   Y   T     +       K+W P DL++ G +    H +Y   F
Sbjct: 473 --ESDTFDTFMDSSWYYARFTSSNNNNEIFDENTKYWLPVDLYIGGIEHAILHLLYSRFF 530

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +  + P  K++ + G +L  G K+SKS GN +DP   IE+ G D +R +++
Sbjct: 531 HKALRDIGLVEGDEPF-KRLLTQGMVLKDGAKMSKSKGNTVDPQSYIEKYGADTVRLYMM 589

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                 +   + +  ++         G    + R  S+I       +     F++ +  +
Sbjct: 590 FTSPPEQSLEWSESSVE---------GASRFLKRIWSLIEGKKYIKLDMKFEFSKEEIEL 640

Query: 391 LSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
              C   L+++  + +     + A+A ++ L++ +        P E KK N   A    +
Sbjct: 641 RRKCHSTLKKVENDYESRFSFNTAIAAIMELLNFI--------PDEFKKDNATDAQ--KF 690

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
              E I     +L    P +   ++
Sbjct: 691 CLNEAILFSLKMLFPISPHICEYLW 715


>gi|325830439|ref|ZP_08163896.1| leucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487906|gb|EGC90344.1| leucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 859

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+   H+GH     I DV+AR++++ G DVL   G D  G     AA
Sbjct: 32  SKPKKYVLEMFPYPSGDIHMGHVRNYTIGDVVARYYKMRGFDVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT---TEKRHHDTCRILWKKISDKGDI 119
                    +   N    +     +  SYD + RT    +  ++   + ++ +   +G +
Sbjct: 92  IKRNSHPAKWTYANIDTQKASFKRMGFSYD-WDRTVVACDPEYYRWGQWIFLQFWKRGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +         +++V +G         H  V+  +   ++F+++ Y  +LL  
Sbjct: 151 ERRNSPVNWCPNCATVLANEQVTEGE----CWRCHGAVEKRDLTQWYFKITDYAQELLDD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +++          G
Sbjct: 207 LDQLDGWPERVKQMQANWIGRSEG 230



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 97/277 (35%), Gaps = 25/277 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y             KA  W P D ++ G +    H +Y   
Sbjct: 515 KRETDTMDTFTCSSWYYLRYTDPHNEELPFAPEKANRWMPVDQYIGGIEHAILHLLYSRF 574

Query: 278 FL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +         L  + P    +         GE +SKS GNVI P ++I E G DA+R ++
Sbjct: 575 YTKVLRDLGLLEFDEPFSNLLCQGMVKDEHGETMSKSKGNVIAPEDMIAEYGADAVRAYI 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-- 387
           +      KD  +D+ GL             N   R V+ ++   D         +E +  
Sbjct: 635 LFMAPPDKDLLWDEGGLAG------IYKFMNRAWRIVNDLMGAADEETLYQPGASEDEGI 688

Query: 388 ---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
              E ++    RV+ ++ ++      + ALA ++ L +    Y     P E       RA
Sbjct: 689 KALEQLVRERHRVVGKVVDDFDRNNFNTALAAIMELTNAASDYLRKCSPEERAGCEGSRA 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                V  EV   L  LL  F P  A +++  +   D
Sbjct: 749 -----VDAEVAEVLVKLLAPFAPHWAEELWHAVLGKD 780


>gi|195337561|ref|XP_002035397.1| GM14681 [Drosophila sechellia]
 gi|194128490|gb|EDW50533.1| GM14681 [Drosophila sechellia]
          Length = 869

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 11/230 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA
Sbjct: 60  SKDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y
Sbjct: 120 NQRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELTTCSPKYYKWTQHLFLMLHRHGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    D++V          A+   V+      +F R SAY  +LL   
Sbjct: 180 QNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLRQWFIRTSAYAKQLLDGL 236

Query: 181 ------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 +      L      E   +  + L   S   + +    +   DP
Sbjct: 237 EDPTLRDWRDIINLQRHWIGECDGYAFNLLTSASGFLRVWTTHPEHLKDP 286



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/376 (15%), Positives = 108/376 (28%), Gaps = 86/376 (22%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+      ++         +        G K 
Sbjct: 395 KLKDWLISRQRYWGTPIPIVHCQKCGSVPVPEEQLPVTLPPKDSPKEAFLCDCPKCGEKD 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      +           +F P DL++ GK+    H  Y  
Sbjct: 455 ARRETDTMDTFVDSSWYYLRYLDAQNTESIFDPALTKRFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFL---LSANLPLPKKVFS---------HGFILHKG------------------------ 300
                  S  L    + FS               KG                        
Sbjct: 515 FMNQFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYVPESEVEIVNAKKNQAVLKE 574

Query: 301 ---------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                    EK+SKS  N ++P ++  E G D  R  ++ ++A      +          
Sbjct: 575 TKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLIILADVAPTSHRNWSSATF----- 629

Query: 352 ADLANGIGNLVSRSVSMILKDYD--------GMIPTPGAFTESDESILSVCSRVLQEIRE 403
                GI N   R    +    +         ++PT   F   D  +    +  ++    
Sbjct: 630 ----PGILNWQKRLWLTLQDFQEAREDQTASHVVPTSEEFLAEDAKLFDARNFYVKGATF 685

Query: 404 NMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA--- 459
           N +  Q +  A++++  L +             L++T       VL    +  R LA   
Sbjct: 686 NYRHAQQLSVAISKMQGLTN------------SLRRTP----KHVLRHGKQFERALAAQI 729

Query: 460 ILLQAFVPKLANKIFD 475
           I+L    P  A++++ 
Sbjct: 730 IMLAPMAPHFASELWS 745


>gi|241664156|ref|YP_002982516.1| leucyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240866183|gb|ACS63844.1| leucyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 877

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  + + YP+ + H+GH     I DV+ R  R+ G +VL   G D  G     A
Sbjct: 36  SDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N GV    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 96  ALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLEKGVA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            V+  E   Y+  ++ Y  +LLS 
Sbjct: 156 YRKTGTVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPMYYLGITKYAQELLSD 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            ++          +   I   +
Sbjct: 212 LDALGWPERVKLMQQNWIGKSE 233



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 117/357 (32%), Gaps = 40/357 (11%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    +D  + N      G   +      +   +++   Y+ R +    K +     + 
Sbjct: 479 TGNPLAKDPRFLNCTCPSCGKPARRETDTMD--TFIDSCWYYMRYTCPDGKTMVD-ARND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTNLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K    PAD+ V   +             + A L    +    G +    EK+S
Sbjct: 592 REDASGKKQWINPADVDVQTDE---------RGRPVGATLKADGQPVVIGGV----EKMS 638

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP  +I++ G D  R F +      +   ++  G++    +     + N    
Sbjct: 639 KSKNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWNDAGVEGA--SRFLRRLWNFG-- 694

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
                              T++D ++      VL++   + +    +  ++  + +++ +
Sbjct: 695 VAHADAIRTGHGNGFVAGATDADRALRRELYTVLKQANYDYERLQYNTVVSATMKMLNAL 754

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                     E  K     A        E +  L  +L   VP + + ++  L  A 
Sbjct: 755 ----------EGAKDAGADAR------REGLGLLLRVLYPVVPHITHVLWTELGYAG 795


>gi|148237378|ref|NP_001085563.1| leucyl-tRNA synthetase 2, mitochondrial [Xenopus laevis]
 gi|49115146|gb|AAH72935.1| MGC80460 protein [Xenopus laevis]
          Length = 900

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 85/201 (42%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 75  KSKSKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 134

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    + ++N ++ R+  + + + +  D  I T  + ++   + L+ K+ + G  
Sbjct: 135 AIEHGLRPDTWTERNIKHMREQLERIGLCFNWDREITTCSEDYYKWTQYLFLKMYEAGLA 194

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+    + +F + + +   +   
Sbjct: 195 YQKEAMVNWDPVDQTVLANEQVDENGCSWRSGAK---VEQKYLKQWFLKTTVFAKAMSDA 251

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 252 LADLPEWYGVKSMQANWIGEC 272



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 73/467 (15%), Positives = 134/467 (28%), Gaps = 74/467 (15%)

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI-LWKKISDK 116
            AK      + TK+ +        ++AD L + Y   I T+            +  +S +
Sbjct: 357 AAKTEFEGYLDTKIGIPSAKPEDAELADKLGLQYVRVIVTSSDGTEMISNSGKFTGLSRQ 416

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                               +D         Q Y     PV      G           L
Sbjct: 417 EAFLAITQQASSEGVGGHLTSDKLRDWLISRQRYWGTPIPVIHCPSCGAVPVPYEDLPVL 476

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
           L          L                   +  R+T         D             
Sbjct: 477 LPSVACFTGKGLSPLASASEWIHCNCPRCAGAAVRET---------DTMDTFVDSAWYYL 527

Query: 237 NYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLP 287
            Y          D + A FW P DL++ GK+    H  Y   F              P  
Sbjct: 528 RYTDPINSERPFDKTWADFWMPVDLYIGGKEHAVMHLYYARFFNHFCSSQGMTKHREPFH 587

Query: 288 K----------------------------------KVFSHGFILHKGEKISKSLGNVIDP 313
           K                                   + +   +L   EK+SKS  N +DP
Sbjct: 588 KLLVQGLIKGQTYKLASTGRYLKKNEVDDTGSEPVHLETGEKLLVTWEKMSKSKHNGVDP 647

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E++++ G+D  R +L+      +D  +D   +K      +      L + +   I    
Sbjct: 648 EEIVDQYGIDTTRLYLLFAAPPEQDILWD---VKTDAIPGVRRWQTRLWTITSKFIEARN 704

Query: 374 DGMIPTPGAFTESD----ESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYF 428
              +P P    + +      I    +  + E+  +  ++ L + +++Q++SL + +    
Sbjct: 705 FSSVPNPHLLNKKEVAEARRIWESRNLAVLEVTSHFTEDYLFNASISQLMSLSNTLS--- 761

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            A     L  +  + A          +  L I++    P LA++++ 
Sbjct: 762 QASSRVILHSSEFEDA----------LASLCIMVAPMAPHLASELWK 798


>gi|326922099|ref|XP_003207289.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 904

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +AR+ ++ G+ VL   G D  G     A
Sbjct: 79  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDAVARYQKMRGMQVLNPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R+  D L +S+  +  + T    ++   + L+ K+ + G +
Sbjct: 139 AIEHGLHPASWTQSNIQHMREQFDALGLSFTWEREVTTCLPEYYKWTQYLFLKLFESGIV 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    D          V+    + +F + +AY   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQV---DDNGCSWRSGAKVEQKYLKQWFIKTTAYAKAMFDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+    E +   I   
Sbjct: 256 LSDLPEWYGIKEMQANWIGDC 276



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 112/339 (33%), Gaps = 74/339 (21%)

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADL 260
               + +  R   +   +I     ++   W      Y      +   +   A +W P DL
Sbjct: 499 PEWVNCACPRCKAEARREIDTMDTFVDSAW--YYLRYTDPHNTVRPFNRDLADYWMPVDL 556

Query: 261 HVIGKDILRFHAIYWPAFLLSA--------NLPLPK------------------------ 288
           ++ GK+    H  Y   F              P  K                        
Sbjct: 557 YIGGKEHAVMHLFYARFFSHFCHDLKMTKHKEPFHKLLVQGLIKNQTFRLRTTGQYLKRE 616

Query: 289 ----------KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                      + +   +    EK+SKS  N IDP E+++E G+D +R +++      +D
Sbjct: 617 EVDLTGTEPVHLKTGEKVQVTWEKMSKSKHNGIDPEELMKEYGIDTIRLYILFAAPPEQD 676

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAFTESDESILSVC 394
             +D          D   G+    +R  +++ K         IP P   +  +++     
Sbjct: 677 ILWDTK-------TDAMPGVQRWQTRLWTLVTKLIEARTSETIPNPEVLSNIEKAEAKRI 729

Query: 395 ----SRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
               + V+ E+ E      L + A+++++SL + +      Q  W L   + +       
Sbjct: 730 WEQKNLVISEVTEYFTKDHLFNAAISRLMSLSNVL-----HQASWPLVLHSAEYEDA--- 781

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                +  L I++    P +A++++  L   +   C   
Sbjct: 782 -----LATLCIMVAPMAPHIASEMWKGLAHIENKLCAHH 815


>gi|294338595|emb|CAZ86924.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Thiomonas
           sp. 3As]
          Length = 876

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 6/219 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  EK Y  + + YP+ + H+GH     I D+L R  R++G +VL   G D  G     A
Sbjct: 30  KPGEKFYACSMLPYPSGKLHMGHVRNYTINDMLTRHLRMNGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMKNKVPPAKWTYDNIAYMKRQMQAMGLAIDWSREVATCSPEYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V  G            V+  E  GY+ +++ Y ++LL+ 
Sbjct: 150 ERRTQVVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPGYYLKITDYAEELLAA 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                +          V    ++ +   +  R  F   I
Sbjct: 206 VADPEDKNYLAGWPERVRLMQENWIGKSAGVRFAFPHSI 244



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 23/180 (12%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N +DP ++I+  G D  R F +          ++   ++         G    +
Sbjct: 639 MSKSKNNGVDPQDLIDRYGADTARLFTMFAAPPEATLEWNDAAVE---------GAHRFL 689

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  +  LK    +     A  ++   +     + LQ++  +      +  ++  + L++
Sbjct: 690 RRVWAFGLK-LSTLAAPAAAPGDAARKLRREVHQTLQQVNFDYGRMQYNTVVSGAMKLLN 748

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +             +     A  +     E    L  +L    P +A+ ++  L    E
Sbjct: 749 AL-------------EGADAAADGMAVALREGFGILLRVLYPATPHIAHALWQELGYGAE 795


>gi|254421177|ref|ZP_05034895.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188666|gb|EDX83630.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 868

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +K Y  +   YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 33  DAKKFYALSMFPYPSGDLHMGHVRNYTITDVVARVRRMQGYNVLHPMGWDAFGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    RD    L +SYD    + T    ++   + ++ +  + G  Y
Sbjct: 93  IKRGVPPADWTLKNIAQMRDQLKALGLSYDWNLEVATCLPNYYRWTQWIFLQFFESGLAY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V   ++G+ + +    V+    + +FF+++ Y D+LL+  
Sbjct: 153 QKEAAVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERKLLKQWFFKITEYADQLLNDL 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++           G
Sbjct: 210 DKLPGWPNRVKTMQANWIGKSKG 232



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 111/319 (34%), Gaps = 63/319 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++++  +   G +   D              Y       +     +   W P D +V G 
Sbjct: 483 VNVACPSCGTGAQRETDTMDTFLDSSWYFLRYADANNEENVFSKDRVNKWLPVDQYVGGI 542

Query: 266 DILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE----------- 301
           +    H +Y   F         L  + P  +      V +  +    G+           
Sbjct: 543 EHAILHLLYSRFFTKVLRDRGLLDFDEPFERLLTQGMVQAITYKTSDGQFIVPENIADLN 602

Query: 302 ----------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                           K+SKS  N I PI V+E+ G D  R F++ +    KD  +D   
Sbjct: 603 NPVDPDTGAPLKVSFEKMSKSKFNGISPIAVLEKYGADTARMFILFKAPPEKDLEWDDAD 662

Query: 346 LKKRV---NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           ++ +    N      I    S + + ++   D +        ++++++       ++EI 
Sbjct: 663 VEGQYRFLNRVWRAVIEFAQSDNAANLVSASDKI--DQSTLNKAEKTLRRATHTAIKEIT 720

Query: 403 ENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+++ +   + A+++++ L + ++                D       V  E I  L  L
Sbjct: 721 EDIEGDYQFNTAVSELMKLSNAIN----------------DTKDKATPVFAEAICALVRL 764

Query: 462 LQAFVPKLANKIFDILFVA 480
           +  F P +A++++  L ++
Sbjct: 765 IAPFAPHIADELWSALTIS 783


>gi|22299641|ref|NP_682888.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|29337024|sp|Q8DH61|SYL_THEEB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22295825|dbj|BAC09650.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 857

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  QKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARCRRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  +V+  QN    R     L +SYD    + T    ++   + L+ +  + G  Y
Sbjct: 91  IERGIHPRVWTQQNIGQMRQELQRLGLSYDWEREVTTCHPDYYRWTQWLFLEFFEAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V               V+    + +F +++AY ++LL+  
Sbjct: 151 QKEAAVNWDPVDQTVLANEQVDSE---GRSWRSGALVERRLLKQWFLKITAYAEELLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E    +   ++           G
Sbjct: 208 EQLTGWPERVKLMQANWIGQSRG 230



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 28/185 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P +VI++ G D  R F++ +    KD  +D   ++ +      N +  
Sbjct: 614 EKMSKSKYNGVAPGDVIQQYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLNRVWR 671

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
           LV    +   K      P P   T++++ +       ++EI E+++ +  ++ A+A+++ 
Sbjct: 672 LVQ---TFKAKGGRLGQPLPATLTKAEKDLRRAIHTAIKEISEDIEGDYQLNTAVAELMK 728

Query: 420 LVSE---VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           L +     D Y                      V  E I+ L  LL  F P ++ +++  
Sbjct: 729 LSNALSSADCY-------------------TSGVYSEGIQTLLTLLAPFAPHISEELWHQ 769

Query: 477 LFVAD 481
           L   D
Sbjct: 770 LGGTD 774


>gi|163734313|ref|ZP_02141753.1| leucyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161392321|gb|EDQ16650.1| leucyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 883

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 65  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAA 124

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N ++ RD    L +S D      T +  ++   + L+    + G +Y
Sbjct: 125 MAIGGHPKDWTYGNIKDMRDQMKPLGLSIDWSREFATCDPEYYGQQQSLFLDFLNAGLVY 184

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V +G            V+  E   +FF++S + ++LLS  
Sbjct: 185 RKNAIVNWDPVDMTVLANEQVEQG----RGWRSGALVERRELTQWFFKISDHSEELLSAL 240

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   +    E       GL+
Sbjct: 241 DTLENWPAKVRLMQENWIGKSRGLQ 265



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 59/381 (15%), Positives = 115/381 (30%), Gaps = 90/381 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L Y  S      P+ R          
Sbjct: 462 WGLSRQRYWGCPIPVVHCDDCGVVPEKKENLPIELPYDVSFDTPGNPLNRHPT------- 514

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y                 A++W   
Sbjct: 515 -----WRDTPCPACGKPAQRETD-TMDTFVD-SSWYFARFTAPRAETPTVMEDAQYWMNV 567

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP-----LPKKVFSHGFILHK---------- 299
           D ++ G +    H +Y      A  ++ +LP         +F+ G + H+          
Sbjct: 568 DQYIGGIEHAILHLLYSRFFARAMQITGHLPQSAIEPFDALFTQGMVTHEIYQTRDANGR 627

Query: 300 ------------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                     K+SKS  NV+DP+ +I   G D  R+F++ +   
Sbjct: 628 PVYHLPEDVTDGRLADGTEVEIIPSAKMSKSKKNVVDPLGIIASYGADTARWFVLSDSPP 687

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +              ++R  ++  +             + DE +L    
Sbjct: 688 ERDVEWTASGAEAA---------FKHLTRVWTLSER---IGKMDKDTAGKGDEDLLRAMH 735

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + ++   +++   + A+A++ +  +            +L+K+    A+         I
Sbjct: 736 VCIHDVTMGVESFGFNAAIAKLYAFTA------------KLQKSKAGYAAQ-----RTAI 778

Query: 456 RQLAILLQAFVPKLANKIFDI 476
             LA L+    P LA  I+  
Sbjct: 779 MTLAQLMSPMTPHLAEDIWAH 799


>gi|330428848|gb|AEC20182.1| leucyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 885

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+ + H+GH     I D++AR  R+ G +VL   G D  G     A
Sbjct: 36  SSKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +   +   + +++   + L+ ++ +KG  
Sbjct: 96  AIKSQVPPAKWTYDNIAYMKKQMKAMGLAIDWSREMCACDPKYYKWNQWLFLQMLEKGIA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  E  GY+ R++ Y ++LL  
Sbjct: 156 YRKTQVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPGYYLRITDYAEELLGK 211

Query: 180 YESHPEFILPIER-RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            +          R   E       G++           G  I D   Y+     D 
Sbjct: 212 VQDGLPGWPERVRLMQENWIGKSEGVRFAFTHDIKNSSGNLIQDGRMYVFTTRADT 267



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 71/328 (21%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           LS          +   D              Y +        D     + P D ++ G +
Sbjct: 492 LSCHCPKCGTAARRETDTMDTFVDSSWYFMRYTSPDNDGAMVDERNDYWMPMDQYIGGIE 551

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHK-------------- 299
               H +Y   +         L  + P  K      V +H +                  
Sbjct: 552 HAVLHLLYARFWTRVMRDLGLLKFDEPFTKLLCQGMVLNHIYSRKNAKGGIEYFWPEEVE 611

Query: 300 ----------GEK---------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                     G K               +SKS  N +DP  +I+ +G D  R F++    
Sbjct: 612 NQYDGKGAIIGAKLHSDGSAVQYGGIGTMSKSKNNGVDPQSLIDSMGADTARLFVMFASP 671

Query: 335 CGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             +   +   G++   R    L +   N  +     I  D D          ++ + +  
Sbjct: 672 PEQTLEWSDSGVEGANRYLRRLWSFCHNKQADIQQGIKPDTDWSGAD-----DASKGLRR 726

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
               +L+    + Q    +  ++  + +++ +       +   L  T   +A+       
Sbjct: 727 EIHTLLKMADYDYQRIQYNTVVSTCMKMLNAL-------ESASLANTPVAQAA-----LA 774

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVA 480
           E    L  +L   VP +  +++  L  +
Sbjct: 775 ETTSMLLRVLYPVVPHITWQLWQDLGYS 802


>gi|302760033|ref|XP_002963439.1| hypothetical protein SELMODRAFT_141956 [Selaginella moellendorffii]
 gi|300168707|gb|EFJ35310.1| hypothetical protein SELMODRAFT_141956 [Selaginella moellendorffii]
          Length = 960

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 73/430 (16%), Positives = 137/430 (31%), Gaps = 64/430 (14%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +        ++ + Y +  E+   A       +   +   + E  +FR     
Sbjct: 357 MRLGVCSRTGDVVEPMIKPQWYVSCKEIAAKACNAVRTKEL-EIIPSQFEDTWFRWLENI 415

Query: 174 DKLLSYYESHPEFILPIERR-------NEVISFVKSGLKDLSLSRKTF--------DWGI 218
                  +      +P            E+ ++    +   S +               I
Sbjct: 416 RDWCVSRQLWWGHQIPAWYCTFEGDELKEMGAYNDHWIVARSETEARVAAEEKFSGKKII 475

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
               DP  ++  W  +     +  G+ +     +A F+P  L   G DIL F    +   
Sbjct: 476 SFEQDPD-VLDTWFSSGLFPFSVLGWPEATKDLQA-FYPTTLLETGHDILFFWVARMVMM 533

Query: 277 AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV--------------- 320
              L+  +P  K++F H  +    G K+SKSLGNVIDP++VI  +               
Sbjct: 534 GIQLTGEVPF-KQIFLHAMVRDAHGRKMSKSLGNVIDPLDVIHGITLDGLKAKLSQGNLD 592

Query: 321 ----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                                 G DALR+ LV   A  ++   D   +         N +
Sbjct: 593 PAEYKTALAGLQSDFPEGIPVCGADALRFALVNYTAQSENINLDVQRVAG--YRYWCNKL 650

Query: 359 GNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N +  ++  +  ++             S + ILS  +  +  +  +M+   +  A + +
Sbjct: 651 WNAIRFAMLNLGDNFIPSEELNISELPWSCKWILSALNGTVAAVDGHMEKYDLSAASSAI 710

Query: 418 ISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            S       D + +  KP   K  + D            +     LL  F+P +  +++ 
Sbjct: 711 YSWWQYDLCDVFIELTKPTLSKGDSEDAKKLTRDTLWVCLENGLRLLHPFMPFVTEELWQ 770

Query: 476 ILFVADENRC 485
            L  A E   
Sbjct: 771 RLPRAQEENS 780



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 48/166 (28%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K  +           HIGHA    + D L R+ R+ G + L+  G D  G      
Sbjct: 30  SQKPKFVMVIPPPNVTGVLHIGHALMCAVEDTLTRWRRMKGYETLWVPGVDHAGISTQVV 89

Query: 62  AQNAGVTTKVFV-------------DQNSRNF--------RDMADVLDISYDDFIRTTEK 100
            +   +  K                               R M   +D S + F  T ++
Sbjct: 90  VEKKIMREKGLTRHDVGREDFVKEVWSWKEQHGTSIFSQLRKMGASVDWSRECF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                    + +    G +Y+      +        +D EV    D
Sbjct: 148 PRCKAVVEAFVRFHKDGLLYRDNRLVNWDCVLRTAISDIEVVDYID 193


>gi|319944268|ref|ZP_08018544.1| valyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
 gi|319742563|gb|EFV94974.1| valyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
          Length = 1005

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 122/371 (32%), Gaps = 62/371 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFI---LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E +      +   +  +  S   +    +P     +   FV    ++            
Sbjct: 440 PEHWASTYDHWLSNIHDWCISRQLWWGHRIPAWYSEDGQLFVARNEEEARQKADAAGCTG 499

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFH--AI 273
            +  DP  ++  W  +     T+ G+  +   ++A   ++ P+D+ V G DI+ F    +
Sbjct: 500 PLTQDPD-VLDTWFSSALVPFTSLGWPADDAQTRADLARYLPSDVLVTGNDIIFFWVARM 558

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P      +      +G+K+SKS GN +DP+++I+               
Sbjct: 559 VMMTQYFTGKVPFKDIYINAIVRDSEGQKMSKSKGNTLDPLDLIDGIELDALLAKSVRGL 618

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+         +   +D    +     +  N
Sbjct: 619 MRADHKARIEKYVKKHFPDGIPAFGTDALRFTFASLANFSRTLNFDISRCEG--YRNFCN 676

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG----------AFTESDESILSVCSRVLQEIRENMQ 406
            + N  +R V M ++ +D     P            F+  D  I+S   R   E+ + + 
Sbjct: 677 KLWN-ATRFVLMNVEGHDNGFARPCKKDCGPGQFMDFSPVDRWIVSELQRTEAEVAKALA 735

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 A   +   V     D Y +  K  EL   +P +     +  + V+  +  L   
Sbjct: 736 EYRFDLAANAIYGFVWNSYCDWYLELAKV-ELNHEDPAQRRGARHTLLRVLEAVLRLAHP 794

Query: 465 FVPKLANKIFD 475
            +P +  +++ 
Sbjct: 795 LIPFITEELWQ 805



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 57/176 (32%), Gaps = 26/176 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--- 63
             I           H+GHA++  + D L R+HR+ G D  +  G+D  G       +   
Sbjct: 62  YCIQLPPPNVTGTLHMGHAFQQTLMDTLIRYHRMLGKDTNWVVGSDHAGIATQIVVERQL 121

Query: 64  -----------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTT------EK 100
                            +V+  +N       +  R + D  +  Y D + T       + 
Sbjct: 122 AAEGKSRYDLPREQFIERVWAWKNESGGAISKQMRRLGDSANWEYADSLGTHSGYFTMDP 181

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           +       ++ ++ + G IY+G     +        +D EV       +      P
Sbjct: 182 KLSTAVAEVFVRLYEAGLIYRGKRLVNWDPVLRTAVSDLEVDMTERDGHLWHIRYP 237


>gi|284164483|ref|YP_003402762.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284014138|gb|ADB60089.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 934

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 72/198 (36%), Gaps = 2/198 (1%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  AR+ R+ G DVL   G D  G     AA     
Sbjct: 35  YVLGMFPYTSGTLHMGHVRNYAITDAYARYRRMQGDDVLHPMGWDAFGLPAENAAFERKT 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +     R  RD  + +   YD    I T E  ++   +  +K++ ++G +     S
Sbjct: 95  DPESWTQACIRRMRDELETMGFGYDWSREITTCEPEYYRWNQWFFKRLYEEGLVEYEGAS 154

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E      +V +    +       PV   E + +FF ++ Y ++L    E    
Sbjct: 155 VNWCPDCETVLAAAQVEERDGERVCWRCETPVGRRELDQWFFTITDYAEELHDGLEDLEG 214

Query: 186 FILPIERRNEVISFVKSG 203
           +   +          + G
Sbjct: 215 WPDGVREIQRNWIGRQEG 232



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 106/336 (31%), Gaps = 45/336 (13%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                +      Y    +          +P+   +  I   +      +      +W   
Sbjct: 459 YRLRDWLISRQRYWGTPIPVVHCDDCGRVPVPDEDLPIELPEFVRTTGNPLDAAEEWKQT 518

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYL-----------DNPDGSKAKFWPADLHVIGKDIL 268
           +  D         D +  ++ ++ Y                     + P D++V G++  
Sbjct: 519 VCPDCGGPAERETDTMDTFVDSSWYFLRFLSPGLEDAPFDTELTDDWLPVDVYVGGEEHA 578

Query: 269 RFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
             H +Y   F        L       +++ S G +L+ GEK+S S GNV+ P E     G
Sbjct: 579 ILHLLYTRFFTKALADLGLLEQREPIRELKSQGTVLYDGEKMSSSKGNVVAPQE----YG 634

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            +  R F++      +D  +  + +  R   +L   +  + S  V            T  
Sbjct: 635 AETTRLFVLSAAHPEQDFEWTANNV--RGAYELQQTLYGMASAFVE--------EGDTRV 684

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                D  +     R +  + +  +    HRA  ++  L   + RY + ++P        
Sbjct: 685 KRRPHDGYLAREIDRTIVAVTDEYERFRFHRAATEIRELARLLRRYREYERPH------- 737

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   V    +  L+ L+    P L  + ++ L
Sbjct: 738 ------GEVYRRGLLTLSALIAPMAPHLGEECWNKL 767


>gi|254477744|ref|ZP_05091130.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031987|gb|EEB72822.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 853

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKLSTGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +  +N  + R     L +S D      T +  ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYKNIADMRGQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y ++LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERRELTQWFFKISDYSEELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +S   +   +    E       GL+
Sbjct: 206 DSLENWPAKVRLMQENWIGKSRGLQ 230



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 117/394 (29%), Gaps = 98/394 (24%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G            L    S  +   P++R          
Sbjct: 424 WGLSRQRYWGCPIPVVHCDSCGVVPEKKENLPVRLPDDVSFDKPGNPLDRHPT------- 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y       D         A++W   
Sbjct: 477 -----WRDCDCPTCGKPAKRETD-TMDTFVD-SSWYFARFTAPDADTPTRMEDAEYWMNV 529

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI------LH 298
           D ++ G +    H +Y      A  +  +LP            + + +H           
Sbjct: 530 DQYIGGIEHAILHLLYSRFFARAMQICGHLPEKAKEPFNALFTQGMVTHAIYENAERKTE 589

Query: 299 KGE-------------------------------KISKSLGNVIDPIEVIEEVGVDALRY 327
            G                                K+SKS  NV+DP+++I   G D  R+
Sbjct: 590 NGRPIYHYPEEVEERDGGVYVKDTGEAIKVIPSAKMSKSKNNVVDPLQIISSYGADTARW 649

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           F++ +    +D  +   G +        N + NL  +  SM           P A    D
Sbjct: 650 FVLSDSPPERDVEWTAAGAEAAHKH--LNRVWNLCDKIASM----------EPDATGSGD 697

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
           + +L    + ++++  +++    + A+A++    +             L K+    A+  
Sbjct: 698 DELLREMHKAIRDVTLSIETFGFNAAIAKLYGFTN------------TLAKSKAGTAAQ- 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                + I  LA L+    P LA  I+     A 
Sbjct: 745 ----KQAIMTLAQLMSPMTPHLAEDIWHHQGGAG 774


>gi|325124515|gb|ADY84038.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 874

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKGNQASTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDVTEATFPEVD 807


>gi|302387234|ref|YP_003823056.1| isoleucyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197862|gb|ADL05433.1| isoleucyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 1037

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/394 (12%), Positives = 121/394 (30%), Gaps = 13/394 (3%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEE 162
             W+  +      +  +    +   E    ++            G++ +   N   W   
Sbjct: 386 HCWRCDTPLIYYARESWFIKMTDVKEDLIRNNNTINWIPESIGKGRFGDWLENVQDWGIS 445

Query: 163 EGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
              ++      ++ +    +       L     N             +++      G ++
Sbjct: 446 RNRYWGTPLNVWECQCGHQHSIGSIDELKAMSPNCPEDIELHRPYIDTVTITCEKCGKQM 505

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
              P+ ++  W D+ +       Y         K +PAD      D     F+++   + 
Sbjct: 506 KRVPE-VIDCWFDSGSMPFAQHHYPFENKELFEKQFPADFISEAVDQTRGWFYSLLAIST 564

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L+    P    +         G+K+SKS GN +DP + +E  G DA+R++     A    
Sbjct: 565 LIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWYFYVNSAPWLP 624

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
             +    + +     +           +   + ++D              D+ +LS  + 
Sbjct: 625 NRFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDEFDPTKYSLEYEKLPVMDKWLLSKLNT 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++ E+   +    I  A   +   V ++ + Y    +     K                +
Sbjct: 685 LVGEVDACLNGYQIPEAARALQEFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTAL 744

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             ++      +P +  +I+  +  + +    +S+
Sbjct: 745 ITVSKTAAPLIPFMTEEIYQNMVCSVDQSAPESI 778



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E E           N +PHIGH    +I D++ R+  + G DV    G D HG  +   
Sbjct: 36  REAETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYDVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      DD   T E   
Sbjct: 96  VEKMLGLDGKEQIEEYGLEPFIKYCKESVWKYKGMWEDFSKTVGFWADMDDPYVTYENNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I ++G +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKQIWERGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|262374208|ref|ZP_06067484.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310766|gb|EEY91854.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 874

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHQVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 21/193 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R +   +              ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLAAGFLETGNQTTTIDTANLSKDAQDLRRKTHETIQKVGDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D A     V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNATNKF--------EAKDDNDAA-----VAREAITTLLTLLAPFAPHLSQTLLTQFG 795

Query: 479 VADENRCFQSLDQ 491
           +      F  +D+
Sbjct: 796 IDLTAAAFPQVDE 808


>gi|317489666|ref|ZP_07948170.1| leucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316911260|gb|EFV32865.1| leucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 859

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+   H+GH     I DV+AR++++ G DVL   G D  G     AA
Sbjct: 32  SKPKKYVLEMFPYPSGDIHMGHVRNYTIGDVVARYYKMRGFDVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT---TEKRHHDTCRILWKKISDKGDI 119
                    +   N    +     +  SYD + RT    +  ++   + ++ +   +G +
Sbjct: 92  IKRNSHPAKWTYANIDTQKASFKRMGFSYD-WDRTVVACDPEYYRWGQWIFLQFWKRGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +         +++V +G         H  V+  +   ++F+++ Y  +LL  
Sbjct: 151 ERRNSPVNWCPNCATVLANEQVTEGE----CWRCHGAVEKRDLTQWYFKITDYAQELLDD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +++          G
Sbjct: 207 LDQLDGWPERVKQMQANWIGRSEG 230



 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 95/277 (34%), Gaps = 25/277 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y             KA  W P D ++ G +    H +Y   
Sbjct: 515 KRETDTMDTFTCSSWYYLRYTDPHNEELPFAPEKANRWMPVDQYIGGIEHAILHLLYSRF 574

Query: 278 FL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +         L  + P    +         GE +SKS GNVI P ++I E G DA+R ++
Sbjct: 575 YTKVLRDLGLLEFDEPFSNLLCQGMVKDEHGETMSKSKGNVIAPEDMIAEYGADAVRAYI 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-- 387
           +      KD  +D+ GL             N   R V+ ++   D         +E +  
Sbjct: 635 LFMAPPDKDLLWDEGGLAG------IYKFMNRAWRIVNDLMGAADEETLFQPGASEDEGI 688

Query: 388 ---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
              E ++    RV+ ++ ++      + ALA ++ L +    Y   + P           
Sbjct: 689 KALEQLVRERHRVVGKVVDDFDRNNFNTALAAIMELTNAASDYLRKRSP-----EQRAAC 743

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                V  +V   L  LL  F P  A +++  +   D
Sbjct: 744 EESRAVDADVAEVLVKLLAPFAPHWAEELWHAVLGKD 780


>gi|258516438|ref|YP_003192660.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780143|gb|ACV64037.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 828

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 7/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
            ER + Y      YP+   H+GH     I DV+ARF  + G DVL   G D  G      
Sbjct: 30  SERPEYYCLEMFPYPSGNLHMGHVRNYSIGDVVARFKSMRGFDVLHPMGWDAFGLPAENA 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           A ++  +    +   N  N R     L +SYD    + T    ++   + L+ ++     
Sbjct: 90  AIKHGNMHPADWTFANIDNMRTQLKQLGLSYDWNREVATCHPGYYKWTQWLFLQLYHHNL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   +  +         +++V +             V+    + +FF+++ Y ++LL+
Sbjct: 150 AYKKYAAVNWCPSCATVLANEQVKED----GCERCGTTVEKKNLDQWFFKITDYAERLLA 205

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             +  P +   ++           G
Sbjct: 206 DLDKLPGWPEKVKIMQRNWIGRSEG 230



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 35/344 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G           +L Y               E            
Sbjct: 430 QRYWGVPIPIIYCEQCGNVPVPEKDLPVMLPYDVQFKPAGRSPLADREEFVHTVCPSCGG 489

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y +        D +KA  W P D ++ G +
Sbjct: 490 PARRET---------DTMDTFVCSSWYFYRYTSPRDEARAWDKAKADRWMPVDQYIGGVE 540

Query: 267 ILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F         +SA  P  + + + G +L +G K+SKS GNV+ P E+I+
Sbjct: 541 HAILHLLYARFFAKVFYDLKLISAEEPF-ENLLTQGMVLKEGAKMSKSKGNVVSPEEIIK 599

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++      +D  +   G++        N +  LV+   + +LK     + 
Sbjct: 600 RYGADTARLFILFAAPPERDLEWSDQGVEGSYR--FLNRVWRLVTPLAADLLK---APVK 654

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             G  +   + +  +    ++++ E+++     + A++ ++ LV+ +  Y D        
Sbjct: 655 PEGEVSGVHKEMRRLSHYTIKKVTEDIEERFNFNTAVSAIMELVNGLYHYRDKLA----- 709

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              PDR   V+    E I  L +LL  F P LA +++  +   D
Sbjct: 710 --EPDRDPAVMR---EAIEALLVLLSPFAPHLAEELWSGIGHKD 748


>gi|110677466|ref|YP_680473.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123066032|sp|Q16E06|SYL_ROSDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109453582|gb|ABG29787.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 848

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N ++ RD    L +S D      T +  ++   + L+    + G +Y
Sbjct: 90  MAIGGHPKDWTYGNIKDMRDQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V +G            V+  E   +FF++S + ++LLS  
Sbjct: 150 RKNAIVNWDPVDMTVLANEQVEQG----RGWRSGALVERRELTQWFFKISDHSEELLSAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   +    E       GL+
Sbjct: 206 DTLENWPAKVRLMQENWIGKSRGLQ 230



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 59/381 (15%), Positives = 115/381 (30%), Gaps = 90/381 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L Y  S      P+ R          
Sbjct: 427 WGLSRQRYWGCPIPVVHCDDCGVVPEKKENLPIELPYDVSFDTPGNPLNRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y                 A++W   
Sbjct: 480 -----WRDTPCPACGKPAQRETD-TMDTFVD-SSWYFARFTAPRAETPTVMEDAQYWMNV 532

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP-----LPKKVFSHGFILHK---------- 299
           D ++ G +    H +Y      A  ++ +LP         +F+ G + H+          
Sbjct: 533 DQYIGGIEHAILHLLYSRFFARAMQMTGHLPQSAIEPFDALFTQGMVTHEIYQTRDANGR 592

Query: 300 ------------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                     K+SKS  NV+DP+ +I   G D  R+F++ +   
Sbjct: 593 PVYHLPEDVTDGRLADGTEVEIIPSAKMSKSKKNVVDPLGIIASYGADTARWFVLSDSPP 652

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +              ++R  ++  +          A  + DE +L    
Sbjct: 653 ERDVEWTASGAEAA---------FKHLTRVWTLSER---IGKMDKDAAGQGDEDLLRAMH 700

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + ++   +++   + A+A++ +  +            +L+K+     +         I
Sbjct: 701 VCIHDVTMGIESFGFNAAIAKLYAFTA------------KLQKSKAGYGAQ-----RTAI 743

Query: 456 RQLAILLQAFVPKLANKIFDI 476
             LA L+    P LA  I+  
Sbjct: 744 MTLAQLMSPMTPHLAEDIWAH 764


>gi|304437236|ref|ZP_07397196.1| isoleucine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369728|gb|EFM23393.1| isoleucine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 1049

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/450 (14%), Positives = 139/450 (30%), Gaps = 24/450 (5%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
               ++ F    +E G+              VFV        D  +     +        
Sbjct: 344 CRKYNMPFVQFVNEKGEMTE-----ETDWPGVFVKDADPLILDDLETSGKLFK------A 392

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                +    W+  +      +  +    + +RDE   N+  V             N ++
Sbjct: 393 PEFTHSYPHCWRCDTPLIYYARASWFIRMTAVRDELVANNKTVNWIPPSIGEGRFGNWIE 452

Query: 159 WMEEEG---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRK 212
            +++ G     +  +       S    H    +   R  +        L      +++  
Sbjct: 453 HVQDWGISRNRYWGTPLNIWKCSCGHEHAVGSIAELRELQPNCPADIELHRPYIDAITFP 512

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G  +   P+ ++  W D+ +       Y         K++PAD      D     F
Sbjct: 513 CPECGEMMHRVPE-VIDCWFDSGSMPFAQWHYPFENKEIFEKYFPADFISEAVDQTRGWF 571

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + LL    P    +         G+K+SKS GN +DP++ +   G DA+R++  
Sbjct: 572 YSLIAISTLLFNKSPYRNVIVLGHVQDKDGQKMSKSKGNAVDPMDALGRHGADAIRWYFY 631

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDE 388
              A      +  D +++     +           +   + ++D           +  D 
Sbjct: 632 ENSAPWLPNRFHDDAVQEGARKFMGTLWNTYAFYVLYANIDEFDPTKYTLDYDQLSVMDR 691

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
            +LS  + +++ + + + +  +  A   + S V E+ + Y    +     K         
Sbjct: 692 WVLSRLNTMVRTVDDCLAHYRVTEAAKALQSFVEELSNWYVRRCRSRFWAKGMEQDKVNA 751

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +   A      VP +   I+  L
Sbjct: 752 YLTLYTALVTTAKAAAPMVPFITESIYRNL 781



 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D+L R+  + G  VL   G D HG  +    + A       
Sbjct: 57  PPTANGRPHIGHVLTRVIKDMLPRYQSMKGRKVLRKAGWDTHGLPVELEVEKAIGINGKE 116

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKI 113
                         +  V +    +   +DV+    D      T E    ++     K+I
Sbjct: 117 QIEEYGIEPFIKKCRESVWKYKSMWEQFSDVVGFWADMEHPYITYENDFIESEWWALKEI 176

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             KG +Y+G     Y  R     +  EV +G  
Sbjct: 177 WKKGLLYQGHKIVPYCPRCGTPLSSHEVAQGYK 209


>gi|188996192|ref|YP_001930443.1| leucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931259|gb|ACD65889.1| leucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 607

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 7/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E  K Y+     YP+ + H+GH     I D++ R++R+ G + L   G D  G     A
Sbjct: 27  EEGNKYYVLEMFPYPSGKIHMGHVRNYAIGDIVNRYYRMAGKNTLHPMGWDAFGMPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    R     L  SY  D  + T    ++   + ++ K+ +KG  
Sbjct: 87  AIKHGVHPAKWTYENIDYMRQQLKRLGFSYDWDREVTTCNPEYYKWNQWIFLKMFEKGIA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V +G           PV   E   ++ +++ Y ++LL  
Sbjct: 147 YRKSAIVNWCPHDLTVLANEQVIEGK----CWRCGTPVVQKEIPSWYLKITDYAERLLED 202

Query: 180 YES-HPEFILPIERRNEVISFVKSG 203
            E    ++   +    E       G
Sbjct: 203 LEKLKGKWPSQVLIMQENWIGKSEG 227


>gi|315224878|ref|ZP_07866698.1| isoleucine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945153|gb|EFS97182.1| isoleucine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 1135

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 10/268 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         K   +PAD    G D     F+ ++
Sbjct: 596 KPMHRETDLIDVWFDSGSMPYAQWHYPFENKDYIEKHTAYPADFIAEGVDQTRGWFYTLH 655

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     V +   +   G+K+SK LGN +DP   I E G DA R++++    
Sbjct: 656 AIATSVFNSVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFTTIAEYGADATRWYMISNAN 715

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D +G+ + V       + N  S        D   Y           E D  IL
Sbjct: 716 PWDNLKFDLEGVAE-VRRKFFGTLYNTYSFFALYANTDSFTYAEADIPLAERPEIDRWIL 774

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + +++E+     +    RA   +   V E   + Y    +    K            
Sbjct: 775 SELNTLIKEVDALYADYEPTRATRAISDFVQENLSNWYVRLSRRRFWKGEYETDKIAAYQ 834

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A L+    P  A++++  L
Sbjct: 835 TLYTCLITIAKLMAPVAPFYADRLYKDL 862



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 19/160 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
                      N  P I H     I D+  R+    G  V    G D HG  +    +  
Sbjct: 40  PFVFFEGPPSANGVPGIHHVMARSIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGVEKE 99

Query: 66  -----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
                                K  V + +  + D+ + +   +  +D   T + ++ ++ 
Sbjct: 100 LGITKEDIGKKISVEDYNKACKEAVMRYTDIWNDLTEKIGYWVDMEDPYITYKPKYMESV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             L K++ +K  +YKG     YS +     +  E+ +   
Sbjct: 160 WWLLKQLYNKQLLYKGYTIQPYSPKAGTGLSSHELNQPGC 199


>gi|328884156|emb|CCA57395.1| Methionine--tRNA ligase [Streptomyces venezuelae ATCC 10712]
          Length = 521

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 96/530 (18%), Positives = 186/530 (35%), Gaps = 42/530 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            ++I+      + + HIGH A   + ADVL R+ R +G  V FTTGT +H   +   A  
Sbjct: 4   PVWITATPPATHGELHIGHLAGPYVAADVLTRYLRAEGEAVRFTTGTADHASSVEVRALR 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKGC 123
                +   +              + +D  +R   +K +    + L+ ++  +G I    
Sbjct: 64  HHRKPEEVAEGYRAAITADWLRSGVEFDHIVRPRRDKGYARWVQDLFGRLFAQGVIAPRT 123

Query: 124 YSGWYSLRDEAYY-------NDDEVYKGADGQYYNAQHNPVQWMEE---EGYFFRLSAYQ 173
               Y    + +                +DG   +    P    +            A  
Sbjct: 124 RLLPYCEPCDRWLYGAHATGTCPHCGAVSDGGMCHECARPNDGGDLIAARCALCDTPAVA 183

Query: 174 DKLLSYY-----------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
            +    Y           +      LP        S V+ GL D+++     +WG+ +P 
Sbjct: 184 RRCRRLYVPLEPFRETLADYWATAGLPPRLAALCESLVEDGLPDIAVGHPA-EWGLPVPV 242

Query: 223 D--PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL 280
           +  P + +    +A   +L                    +H  G      HA+  P  LL
Sbjct: 243 EGFPDHRIDGCFEAAAMHLFGYDVTGPLPRR-------AIHFCGFGHAFCHAVLLPVLLL 295

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + ++ LP+    +   + +        GN +  ++++ E G D LR  +++    G+   
Sbjct: 296 AQDIKLPQDFNVNESYVIE---EGVQEGN-VWALDLLTEYGSDTLRRHVLQARPLGRRTV 351

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           + ++ L      +L     + +SR  + + ++ DG+ P         E +     R + +
Sbjct: 352 FHRERLAA-ARRELDENWNSWLSRLFAAVREECDGLAPQALPGGTGWEVLERRLHRGVDD 410

Query: 401 IRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +RE          RA+A +  +V  V  +         + +   R    L   + V   L
Sbjct: 411 LREAYGPDAFDPRRAVAVLDEMVRSVADFGHVNAHERCRPSTSCRHLPALAGQLAVASAL 470

Query: 459 AILLQAFVPKLANKIFDILFV-ADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           +   +  +P+ A+++   L V       +Q+L   L PG  L     PIF
Sbjct: 471 SAWSRPVMPEGADRLASALQVSPGRPVDWQALTAPL-PGTRLAPPSGPIF 519


>gi|302672204|ref|YP_003832164.1| isoleucyl-tRNA synthetase IleS [Butyrivibrio proteoclasticus B316]
 gi|302396677|gb|ADL35582.1| isoleucyl-tRNA synthetase IleS [Butyrivibrio proteoclasticus B316]
          Length = 1063

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 95/276 (34%), Gaps = 5/276 (1%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     + ++  W D+         Y         K +PA+      D     F++++  
Sbjct: 530 KKMHRVKEVIDCWFDSGAMPFAQLHYPFENKELFEKQFPAEFISEAVDQTRGWFYSLHAE 589

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A LL         +         G+K+SKS GN +DP + +E+ G DA+R++     A  
Sbjct: 590 ATLLFNKPAFKNVIVLGLVQDENGQKMSKSKGNAVDPFDALEKYGADAIRWYFYTNSAPW 649

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
               +  D + +     L          ++   +  +D           T  D+ +LS  
Sbjct: 650 LPSRFSGDAVMEGQRKFLGTLWNTYAFFTLYANIDGFDAANYKLELDKLTVMDKWLLSKL 709

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +  ++ + EN+ N  I  A   + + V E+ + Y    +     K       +       
Sbjct: 710 NSCVKAVDENLANYRIPEAGKALDNFVDEMSNWYVRRSRERFWAKGMEQDKISAYMTLYT 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  +       VP +  +++  L         +S+
Sbjct: 770 ALVTVCKAAAPMVPFMTEEVYQNLVRNSFKDAPESI 805



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVLTRAIKDMIPRYRTMKGYTVPRKAGWDTHGLPVELEVEKMLGLDGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKI 113
                         K  V +    + D +  +    D      T +    ++      +I
Sbjct: 107 QIEEYGMEPFIKKCKESVWKYKGMWEDFSGTVGFWADMEHPYITYDDNFIESEWWALNEI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             KG +YKG     Y  R     +  EV +G  
Sbjct: 167 WKKGLLYKGFKVVPYCPRCGTPLSSHEVAQGYK 199


>gi|156740103|ref|YP_001430232.1| leucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083141|sp|A7NFJ2|SYL_ROSCS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156231431|gb|ABU56214.1| leucyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 904

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + YI     YP+   HIGH    +I D L R++ + G DVL   G D  G     AA  
Sbjct: 40  PRRYILEMFPYPSGDLHIGHLKNYVIGDALTRYYVIRGYDVLHPFGWDAFGLPAENAAIK 99

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G   + +   N    +   ++  I YD    + T +  ++   + L+  +  KG  Y+ 
Sbjct: 100 YGRHPREWTYGNIAESKKSLEIAGIMYDWSREVTTCDPDYYRWNQWLFLLLYRKGLAYRA 159

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V   A+G+ + +    V+  E E +FFR++AY ++LL+  + 
Sbjct: 160 KATVNWDPVDQTVLANEQV--DAEGRSWRSGAK-VEKRELEQWFFRITAYAERLLNDLDK 216

Query: 183 HPEFILPIERRNEVISFVKSG 203
             ++   ++           G
Sbjct: 217 LDKWPENVKTMQRNWIGRSEG 237



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 29/197 (14%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN I     + + G D  R  ++          +  +G+          G    +
Sbjct: 664 MSKSAGNGIPVGPFVRQYGSDVARIVVLFAAPPENSMEWTDEGV---------AGAQRFL 714

Query: 363 SRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +R V++   D + ++         A    + ++       ++++  + +    + A+A +
Sbjct: 715 NRIVALFSPDREEIVAALNSGNGAAPEGEERALYRKLHETIRKVTLDTEQFRFNTAIAAL 774

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++E  RY                A  V  V  +     A LL  F P LA ++    
Sbjct: 775 MELLNEASRY-------------RSEAGRVTPVFAQTAATFARLLSPFAPHLAEELHSWC 821

Query: 478 FVADE--NRCFQSLDQR 492
                  +  +   D+ 
Sbjct: 822 GGTGSVYDTGWPEWDEA 838


>gi|295698309|ref|YP_003602964.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157462|gb|ADD79907.1| leucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 865

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  +   YP+ + H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 33  KKKKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARCQRMLGKNVLHPMGWDSFGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   V+   +  +N RN +D    L +SYD    + T E  ++   +  + K+ +KG IY
Sbjct: 93  KRNKVSAFHWTVENIRNMKDQLKKLGLSYDWSRELSTCEPNYYRWEQWFFTKLYEKGLIY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G+           ++   +  +F +++ Y ++LL   
Sbjct: 153 KKLTEVNWCPTDKTVLANEQVVNGS----CWYCEGKIERKNQLQWFIKITQYSEELLQGL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
                +   ++         + GL
Sbjct: 209 NDLKRWPKKVKTMQRNWIGREEGL 232



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 76/189 (40%), Gaps = 21/189 (11%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N ++P  ++E+ G D +R F++       +  +      +    + A+     
Sbjct: 626 KMSKSKNNGVNPERILEKYGADTMRLFMMFIAPIEMNIEW------RISQMNGAHRFIKK 679

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISL 420
           + + +    ++    +      TE    +     + ++++ ++M      + A+++++  
Sbjct: 680 LWKMIFDHSENQSNEVLQVNQLTERQIDLYLNLQKTIKKVTQDMIDQFHFNTAISEIMKF 739

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+++  Y          K   D     + +  E   Q+ ++L   +P +   ++ +L   
Sbjct: 740 VNKISNYHQ--------KNEQD-----IALIKEAFNQVVLMLFPVIPHVCFILWKVLG-N 785

Query: 481 DENRCFQSL 489
            +N  FQ  
Sbjct: 786 HQNIDFQEW 794


>gi|293610316|ref|ZP_06692617.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827548|gb|EFF85912.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKSNQASTIDAANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDVTEATFPEVD 807


>gi|262280963|ref|ZP_06058746.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257863|gb|EEY76598.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R     + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVAGFLEKGNSTSTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L ILL+ F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----IAVEREAITTLLILLEPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDVTAATFPEVD 807


>gi|224418440|ref|ZP_03656446.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827756|ref|ZP_04870641.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141971|ref|ZP_07804164.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511162|gb|EES89821.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131002|gb|EFR48619.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 879

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 136/386 (35%), Gaps = 55/386 (14%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +    E YK   G  Y    N V+    + +F +      K +    ++     P 
Sbjct: 330 QESGFIEKIEDYKNQVGHCYR-CGNVVEPYISKQWFLKKEV-ATKAIEKINANVSNFFPP 387

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI-----------------------------P 221
           + +N   +     L+D  +SR+   WG +I                              
Sbjct: 388 QWKNN-YNAWMRELRDWCISRQ-LWWGHQIPVFYCDSCNHQWASTKLQTKCPQCQSAQIH 445

Query: 222 DDPQYIMYVWIDALTNYL--------TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
            DP  ++  W  +                           +F+P  L + G DIL F   
Sbjct: 446 QDPD-VLDTWFSSALWPFSTLGFGNGEWGEGTLWQKDDLKEFYPNSLLITGFDILFFWVA 504

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +        + LP P            G+K+SKS GNVIDP+E+IE+   D LR+ L  
Sbjct: 505 RMLMMGEHFLSKLPFPDIYLHALVRDENGQKMSKSKGNVIDPLELIEKYSADVLRFTLAI 564

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G+D     + L+   N    N + N  S  + +  +++  +       T   + + 
Sbjct: 565 LCAQGRDVKLSNNQLEISKN--FTNKLYN-ASNFLLLNTQNFPNLSEIGEPKTPLGKYMA 621

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + S  ++E+R  + +   +     +   +            W ++    D+ S V    
Sbjct: 622 ELLSHTIKEMRGYLDSYRFNDGANALYRFLWG------EFCDWGIELGKADKDSIVE--L 673

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
             + ++  +LL  ++P +++ ++  L
Sbjct: 674 GAIFKESMLLLHPYMPFISDYLWHKL 699



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 22/174 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +   I           HIGHA    + D++ R+ R+DG   L+  G D  G     
Sbjct: 36  IQKNQNFCIMLPPPNVTGSLHIGHALNHTLIDIIVRYKRMDGYKTLWQAGLDHAGIATQN 95

Query: 61  AAQNA----------------GVTTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEK 100
             +                        + +Q      +  R +      S   F  T ++
Sbjct: 96  VVEKQLLAQGIKKETLGREKFIQKVWEWKEQSGGAILKQMRKLGSSPAWSRTRF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
              +  +  + K+ ++G I +G Y   +   D A  + +  YK  +G+ Y+ ++
Sbjct: 154 GLQNAVKEAFVKLYNEGFIVQGKYLVNWCTHDGALSDIEVEYKENNGKLYHLRY 207


>gi|169634386|ref|YP_001708122.1| leucyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688110|sp|B0VKP9|SYL_ACIBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169153178|emb|CAP02268.1| leucyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDLTEATFPEVD 807


>gi|145634297|ref|ZP_01790007.1| valyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268277|gb|EDK08271.1| valyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFVDGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            N  +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQ 766



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 25/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
             AI  PN     H+GHA++  + D L RF+R++G + L+  GTD  G       +    
Sbjct: 42  CIAIPPPNITGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVERKIA 101

Query: 68  TT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                            K++  +       S+  R + + +D   + F  T +    +  
Sbjct: 102 AEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDDGLSNAV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 160 KEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|261867750|ref|YP_003255672.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413082|gb|ACX82453.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 134/417 (32%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D +  +YV                            W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNIYVARSEAEVRSKYQLNPDVALKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
                 K      D+ + G DI+ F       F +           +P      +     
Sbjct: 497 QQTKELKMFH-STDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNVIDP+++I+ +                                     
Sbjct: 556 ENGQKMSKSKGNVIDPLDMIDGISLEDLVAKRTGNMMQPQLAEKIAKSTRKEFSEGIVAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L      G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALATNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R  +           +         D Y +  KP     
Sbjct: 671 IEFSVADRWIQSEFNRTVETFRNALSQFRFDLCATALYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNQAQIRAASQTLVHVLEKLLRLAHPVIPFITEEIWQKVKGFVGIDADSIMLQPFPQ 786



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYSIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVER 98

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D + + F  T +    
Sbjct: 99  KIAAEENKTRHDYGREAFIDKIWEWKAQSGGTISQQIRRLGNSVDWTRERF--TMDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           D  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 DAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|254468063|ref|ZP_05081469.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086873|gb|EDZ64156.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 805

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 6/197 (3%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           + +   YP+ + H+GH     I DV++RF R  G +V+   G D  G     AA      
Sbjct: 37  VLSMFPYPSGKLHMGHVRNYTIGDVISRFKRFQGFNVMQPMGWDAFGLPAENAAIKNNTL 96

Query: 69  TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
              +  QN    ++  + L  S D    I T +  ++   + L+ K+  KG IYK     
Sbjct: 97  PDKWTYQNIDAMKEQLNSLGFSLDWSREIATCDPNYYKWEQWLFIKLFKKGLIYKKTSRV 156

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
            +   D+    +++V  G            V+  E   YFF+++ + ++L     S   +
Sbjct: 157 NWDPVDQTVLANEQVIDGKG----WRSGALVEQKEIPQYFFKITDFAEELDKDINSLDGW 212

Query: 187 ILPIERRNEVISFVKSG 203
              ++   +       G
Sbjct: 213 PPQVKLMQKNWIGKSFG 229



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 118/369 (31%), Gaps = 42/369 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+    E G      +Y   +L             +  N+ I     
Sbjct: 411 WGISRQRYWGCPIPIIHCNECGEVCENESYLPVMLPK-------KEKFDFDNQSIKTEID 463

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
            +  +  S            D       +      Y   T      +     + P D ++
Sbjct: 464 FINCICPSCGNPAQRETDTMDTFVESSWYFAR---YACPTENKSMLNDEANYWLPVDQYI 520

Query: 263 IGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            G +    H +Y            L       + + + G +L  G K+SKS GN +DP E
Sbjct: 521 GGIEHAILHLLYSRFFSRLLRDEGLINISEPFRNLLTQGMVLKDGSKMSKSKGNTVDPGE 580

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D  R F++      +   +   G++              V   +    K  DG
Sbjct: 581 LIEKFGADTARLFIMFAAPADQSLEWSDKGIEGSHR------FLKKVYTQIFNFKKILDG 634

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPW 434
                   +  +       S+ + ++ +++  +   + A+A ++  V+    Y       
Sbjct: 635 QNAFNLKESNLNNEFKFQLSKTIDKVTDDIDRRKSFNTAIASLMEFVN----YL------ 684

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL---FVADENRCFQSLDQ 491
               +  D+  ++  + +   + L I+L  FVP  +  IF  L    +  E     + D 
Sbjct: 685 ----STLDKQKSLNELYLGY-KNLLIMLSPFVPHFSEYIFTKLTAQSIDQETWPLANKDD 739

Query: 492 RLKPGFMLH 500
            ++    + 
Sbjct: 740 LIQSTQTIV 748


>gi|94986597|ref|YP_594530.1| leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988802|sp|Q1MS17|SYL_LAWIP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94730846|emb|CAJ54208.1| Leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 835

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 6/187 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+     YP+   H+GH     I DV+AR  R+ G +VL   G D  G     AA
Sbjct: 33  NKKKYYVLEMWPYPSGNIHMGHVRNYSIGDVIARIKRMQGYNVLHPMGWDAFGLPAELAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R     L  SYD    I T +  ++   ++ +    +KG +Y
Sbjct: 93  IKHHTQPADWTYTNINEMRAQLKRLGYSYDWQREIATCDPDYYQWEQLFFVDCFEKGLVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V +G+           +   E   +F +++ Y ++LL   
Sbjct: 153 RKKAPQNWCPSCNTVLANEQVIEGS----CWRCDTSIIQKELTQWFLKITDYAEELLDDL 208

Query: 181 ESHPEFI 187
            +     
Sbjct: 209 TTLKYSW 215



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 92/238 (38%), Gaps = 25/238 (10%)

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAF----------LLSANLPLPKKVFSHGFILHKGE 301
           AK+W   D ++ G +    H +Y   F            + N P  K + + G ++  G 
Sbjct: 528 AKYWLNVDQYIGGVEHAILHLLYSRFFTKLLRDLGYLPSNINEPFAK-LLTQGMVIKDGS 586

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN++DP ++I   G D +R F +      +D  +   G++        + +  L
Sbjct: 587 KMSKSKGNIVDPNQMINIYGADTIRLFCLFAAPPERDFDWSDSGIEGSYR--FLHRVWRL 644

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISL 420
                  I   + G        T   + +       ++++ E+++N    + A+A ++  
Sbjct: 645 FIDVQPHIHTTHAGNSTVIETTTALTKDVKRKEHITIKKVSEDIENKYQFNTAIASIMEF 704

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+ +  Y    +   L  T   +      +    I  +  LL    P +  +++  L 
Sbjct: 705 VNTL--YLSKNE---LILTVEGK-----NILSSAIATVLTLLSPMTPHICEELWSYLG 752


>gi|148251789|ref|YP_001236374.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166230612|sp|A5E8H4|SYL_BRASB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146403962|gb|ABQ32468.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 72/203 (35%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DVLARF R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHVRNYTLGDVLARFMRAKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G + +
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLRSIGLSLDWAREFATCDPSYYKHQQKMFLDFMQAGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 153 EQRKVNWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITKYSQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
               +   +            GL
Sbjct: 209 GLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++IE  G D  R+F++ +    +D  +  + ++    A     +  
Sbjct: 629 EKMSKSKKNTVDPDDIIESYGADVARWFMLSDSPPDRDVIWSDERVQGA--ARFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ SV+      +     P  F     ++       L ++   ++    +  LA +   
Sbjct: 687 LVNESVA---AGQEAPSSRPATFGPDALALRKAAHGALDKVTGGIERLHFNVCLAHIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +       +P    K  PD A  +     E  + L  L    +P LA + + +L   
Sbjct: 744 ANALAEVL--ARP---AKPAPDLAWAIR----EAAQILVQLFSPMMPHLAEECWQVLGQG 794

Query: 481 D--ENRCFQSLDQRL 493
                  +  +++ L
Sbjct: 795 GLISEASWPQIERDL 809


>gi|260549055|ref|ZP_05823276.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407783|gb|EEX01255.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKGNAATAIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDLTEATFPEVD 807


>gi|226320879|ref|ZP_03796431.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233745|gb|EEH32474.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 612

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 107/283 (37%), Gaps = 5/283 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W ++      +  Y    + +    +PAD    G D     F+ +      L  N 
Sbjct: 87  VLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLTILGTALFENT 146

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                + +   +   G K+SKS  N  DP++VI   G DALR +L+       D     D
Sbjct: 147 AFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPVVKADDLKYSD 206

Query: 345 GLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              + V  ++   I N  S   +   I K       +       D+ I+S    + + + 
Sbjct: 207 NGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIISELESLKKILN 266

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAIL 461
             +    + +++  ++  + +++ ++  +      K+  D+  +         I+ L IL
Sbjct: 267 TEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMIL 326

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           L  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 327 LAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 369


>gi|113475381|ref|YP_721442.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964993|sp|Q114V5|SYL_TRIEI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110166429|gb|ABG50969.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 929

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  NQPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+    +  +N    ++    L   I +D  + T    ++   + ++ +    G  Y
Sbjct: 91  IDRGIPPAKWTLENIAQMKEQLRRLGFSIDWDKEVATCTPEYYRWTQWIFLQFFQAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V    +G+ + +    V+      +FF+++ Y ++LL+  
Sbjct: 151 QKESAVNWDPIDQTVLANEQV--DGEGRSWRSGAK-VERKMLRQWFFKITDYAEQLLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++           G
Sbjct: 208 DKLPGWPERVKLMQANWIGKSVG 230



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 104/378 (27%), Gaps = 119/378 (31%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVI 263
            ++      G     +    M  +ID+   YL      +      +K    + P D +V 
Sbjct: 477 WVNVSCPSCGTPAKRETD-TMDTFIDSSWYYLRYPDATNEEQVFDSKIVNDWLPVDQYVG 535

Query: 264 GKDILRFHAIYWPAFL--------LSANLPL----------------------------- 286
           G +    H +Y   F            + P                              
Sbjct: 536 GIEHAILHLLYSRFFTKVLRDRGLCDFDEPFQNLLTQGMVQGVTYKNPVTGKYIPFADVN 595

Query: 287 ---PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              PK   +   +    EK+SKS  N +DP++V+   G D  R F++ +    KD  +D 
Sbjct: 596 PQEPKDPKTGDKLEVFFEKMSKSKYNGVDPMDVMATYGADTARMFILFKAPPEKDLEWDD 655

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVL 398
             ++         G    ++R  SM+++      +  +       T++D   L     ++
Sbjct: 656 ADVQ---------GQFRFLNRVWSMVMEFLANHSFSELKAKHHGITQADLKDLGWSRYLI 706

Query: 399 QEIRENMQNQLIHRA-----LAQVISLVSEVDRY----------FDAQKPW-------EL 436
            EI +N+    +        +  V+  +     Y                W       EL
Sbjct: 707 TEITKNISAFKLRNVVKVYPVEDVLVAIEAKFNYSETQQETKDDLQKVLTWIKSRFGGEL 766

Query: 437 KKTNPDRASTVLYVTVEVIRQL-------------AILLQ-------------------- 463
            K   D    V     EV   L               L                      
Sbjct: 767 TKAEKDVRRAVHNAIKEVTEDLDGDYQFNTAVSEMMKLSNALGDASCKDSPIYAEALETL 826

Query: 464 -----AFVPKLANKIFDI 476
                 F P +  +++ I
Sbjct: 827 LLLLAPFAPHITEELWQI 844


>gi|145641417|ref|ZP_01796996.1| valyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273960|gb|EDK13827.1| valyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 136/417 (32%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQ 786



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|195941556|ref|ZP_03086938.1| valyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|312149539|gb|ADQ29610.1| valyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 875

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 47/437 (10%)

Query: 82  DMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +++   +IS  + I T + + +    + ++ +S K   +K          ++ +  D + 
Sbjct: 283 EISKRHNISKVN-ILTQDGKLNKNVPLQYQGLSAKDARFKIETELM----EKGFLQDVKK 337

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           +K   G  Y +    ++      +F R+    DK L   E+      P +  N    +  
Sbjct: 338 HKQQVGHCYRSG-EVIEPYLSTQWFVRMKPLADKALKALENGELKFYPKKWENT-YKYWL 395

Query: 202 SGLKDLSLSRKTFDWG--IKIPDDPQ--------------------------YIMYVWID 233
           S ++D  +SR+   WG  I +  +                             ++  W  
Sbjct: 396 SNIRDWCISRQLV-WGHRIPVWYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFS 454

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +        ++P +  +   DI+ F    +       +  +P      
Sbjct: 455 SWLWPFSSLGWPNVDV-DFKNYYPTNTLITAYDIIFFWVARMVMAGLEFTEQVPFKDVYI 513

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +      +G+K+SKSLGN IDP+++I E G D+LR+ L      G+D   D         
Sbjct: 514 TPLLRDKQGKKMSKSLGNGIDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--FG 571

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A  AN + N  S+ + + LK+    I     F + D+ +L+  +  +  +  +  N   +
Sbjct: 572 AKFANKVFN-ASKFILLNLKN--RKILNDLKFNDIDKWLLTSLNSTILGVESSFANYKYN 628

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   V         D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +
Sbjct: 629 EASKFVYEFFWNDFCDWYIEISK-IDLNNENVDIQNMAISKLLFFLKKALLILHPFIPFV 687

Query: 470 ANKIFDILFVADENRCF 486
             KI+      ++    
Sbjct: 688 TEKIYSEFSEKEDILAL 704



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ DVL R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                         +  V +  +          +  + L  SYD      T ++      
Sbjct: 96  HLKKIGKSKDDFEREELVQEIFKLKDRHRGIIVNQINKLGASYDHSREKFTLDENLCKAV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 156 NKVFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|169797225|ref|YP_001715018.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156869|ref|YP_001845208.1| leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155981|ref|YP_002318026.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260556107|ref|ZP_05828326.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|294836312|ref|ZP_06780995.1| leucyl-tRNA synthetase [Acinetobacter sp. 6013113]
 gi|294840232|ref|ZP_06784915.1| leucyl-tRNA synthetase [Acinetobacter sp. 6014059]
 gi|294857748|ref|ZP_06795517.1| leucyl-tRNA synthetase [Acinetobacter sp. 6013150]
 gi|301346500|ref|ZP_07227241.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301509990|ref|ZP_07235227.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594195|ref|ZP_07239203.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226731222|sp|B7I5I5|SYL_ACIB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238688028|sp|B0V5H2|SYL_ACIBY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690966|sp|B2HTC4|SYL_ACIBC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169150152|emb|CAM88046.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208463|gb|ACC55861.1| Leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213055141|gb|ACJ40043.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260410162|gb|EEX03461.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322506763|gb|ADX02217.1| leuS [Acinetobacter baumannii 1656-2]
 gi|323516634|gb|ADX91015.1| leucyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDLTEATFPEVD 807


>gi|255528498|ref|ZP_05395285.1| tRNA synthetase valyl/leucyl anticodon-binding [Clostridium
           carboxidivorans P7]
 gi|255507814|gb|EET84267.1| tRNA synthetase valyl/leucyl anticodon-binding [Clostridium
           carboxidivorans P7]
          Length = 590

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 105/278 (37%), Gaps = 14/278 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+ +       Y         + +PA       D     F+ +   + ++    
Sbjct: 67  VIDCWFDSGSMPFAQHHYPFENKELFEQNFPAQFISEAVDQTRGWFYTLMAISTVIFDKS 126

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V     +   G K+SK  GNV+ P  VIE  G DA R++     A      + ++
Sbjct: 127 PFENCVVLGHVLDKHGLKMSKHKGNVLSPTTVIENEGADATRWYFYTASAPWLPSRFYEE 186

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQE 400
            +++         + N+ S  V  +  D D   P       +    D+ ++S  + +++E
Sbjct: 187 AVQESQ-RKFLGTLWNVYSFYV--LYADIDKFNPLDYKDFVSDNVMDKWVISRLNSLIKE 243

Query: 401 IRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             +++ N  I +A   +   V E+ + Y   +  + W     +    + V     +VI  
Sbjct: 244 TEDHLDNYRITQAATNIGDFVDELSNWYVRRNRARFWSENLGDDKIGAYV--TLYKVITT 301

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           L  +   FVP +  +I+  L V  +    +SL     P
Sbjct: 302 LIKIAAPFVPFMTEEIYQNLVVNIDKDAVESLHLCKWP 339


>gi|239500747|ref|ZP_04660057.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDLTEATFPEVD 807


>gi|313126424|ref|YP_004036694.1| isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312292789|gb|ADQ67249.1| Isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 1044

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VWID+      T  Y  N      + WPADL V   D     F +           +
Sbjct: 521 VFDVWIDSSVATWGTLDYPGNET-DFEELWPADLIVEAHDQTRGWFWSQLGMGTAARGEI 579

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +         G K+SKSLGN++ P E I+  G D LR +L+     G D  +D D
Sbjct: 580 PYEEVLMHGFANDENGRKMSKSLGNIVTPEEAIDRAGRDPLRAYLLSHDQQGVDLSFDWD 639

Query: 345 GLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEI 401
           GL    +A   N   N+    +  M L  YD   P    G  +  DE +LS    V  ++
Sbjct: 640 GLADTQSA--LNIFWNVFRFPLPYMELDGYDPANPDLSAGELSVVDEWVLSRLQTVKADV 697

Query: 402 RENMQNQLIHRALAQVISLVSE-VDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +   +  +H AL  ++  V+E V R++     ++ WE  + + +           V+ +
Sbjct: 698 ADAWDDYEVHDALNAILDFVTEDVSRFYVKAIRERMWE--EEDSESKRGAYATLATVLNE 755

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
              L+  F P +A +++  L  ++
Sbjct: 756 TVQLIAPFTPYVAERMYQHLDGSE 779



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 19/212 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    +      Y + Q H+G A+   + D + R+ R+ G  V    G D HG  I    
Sbjct: 36  DDPAFFFVDGPPYTSGQMHLGTAWNKTLKDAIIRYKRMTGHRVTDRPGYDMHGLPIEVKV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F ++N     D    + +   +DD  +T    + 
Sbjct: 96  EEELGFETKRDIEEYGMESFIDECKSFAERNREAMDDDFQSIGVWMDWDDPYKTLSPEYM 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +     + +++D+G + +G  S  Y  R +     +EV              P++  E  
Sbjct: 156 EAAWWAFDQVADRGLVERGKRSVNYCPRCQTAIAANEVEYDEIDSPSIYVKFPLEDREGS 215

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
              +  + +     ++     E      R  +
Sbjct: 216 LVIWTTTPWTIPANTFVAVDGEMTYQAVRAEK 247


>gi|146337356|ref|YP_001202404.1| leucyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166230613|sp|A4YJS8|SYL_BRASO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146190162|emb|CAL74154.1| leucine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 874

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 72/203 (35%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DVLARF R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHIGHVRNYTLGDVLARFMRAKGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G + +
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLRSIGLSLDWAREFATCDPSYYKHQQKMFLDFMQAGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 153 EQRKVNWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITKYSQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
               +   +            GL
Sbjct: 209 GLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 18/196 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++IE  G D  R+F++ +    +D  +  + ++    A     +  
Sbjct: 629 EKMSKSKKNTVDPDDIIESYGADVARWFMLSDSPPDRDVIWSDERVQGA--ARFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ SV+      +     P  F+    ++       L ++   ++    +  LA +   
Sbjct: 687 LVNESVA---ASAEAPSSRPANFSADALALRKAAHGALDKVTGGIERLHFNVCLAHIREF 743

Query: 421 VSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +   D      KP    K  PD A    + T E    L  L    +P LA + + +L  
Sbjct: 744 ANALAD---VLAKP---AKPAPDLA----WATREAAGILVQLFSPMMPHLAEECWQVLGH 793

Query: 480 AD--ENRCFQSLDQRL 493
           +       +  +++ L
Sbjct: 794 SGLISEASWPQIERDL 809


>gi|126642773|ref|YP_001085757.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|126388657|gb|ABO13155.1| valyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 776

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 336 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 393

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ +
Sbjct: 394 GHRIPAWYDADGNIYVGRSEEEVRAKNNITADVELKQDEDVLDTWFSSALWTFSTLGWPE 453

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K    P D+ V G DI+ F         +           +P             
Sbjct: 454 QTPELKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSSQIPFKTVYVHGLVRDG 512

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 513 EGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKEFPEGINAYG 572

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DA+R+        G+D  +D   ++     +  N I N     +  +     G    P 
Sbjct: 573 TDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQTVGTDARPD 630

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP-WELKK 438
            +   ++ I+S   +    + +      +  A   +   +     D Y +  KP     +
Sbjct: 631 LWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVELTKPVLNDAE 690

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 691 VSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 729



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 24/163 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ------ 63
            I  PN     H+GH +   I D L R++R+ G + L+  GTD  G       +      
Sbjct: 1   MIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVERQLGLQ 60

Query: 64  --------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         KV+  +       ++  R +   +D S + F  T ++   +  + +
Sbjct: 61  GVTRHDLGREKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSNAVKEV 118

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           + ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 119 FVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 161


>gi|319942635|ref|ZP_08016943.1| valyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319803814|gb|EFW00746.1| valyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 946

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/380 (16%), Positives = 131/380 (34%), Gaps = 58/380 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+  E   +         + L   +                 + ++G   ++ + +    
Sbjct: 393 VESGEVNIFPAEWRGVYRQWLENIQDWCLSRQLWWGHQIPAWYDEAGRVYVARTEEEAQK 452

Query: 217 ----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVIGKDILR 269
               G+K+  D   ++  W  +     +T G+       K     + P+ + V G DIL 
Sbjct: 453 QAGEGVKLTRDED-VLDTWFSSALVPFSTLGWPHPEGDEKTAYDLYLPSTVLVTGYDILF 511

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV------- 320
           F    +       +  +P             +G+K+SKS GN +DP+++I+ +       
Sbjct: 512 FWVARMVMMTRHFTGRVPFKNVYIHGLVRDAEGKKMSKSEGNTLDPLDIIQGIDLEHLIE 571

Query: 321 ------------------------------GVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                                         G DALR+ +      G++  +D        
Sbjct: 572 KNTRGLRQPEKAPIVEAKLRKNYPNGIAAHGADALRFTMAAYATLGRNVNFDLKR--AEG 629

Query: 351 NADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
             +    + N  +R V M ++  D         P  F+  D+ I+S   R ++E+    +
Sbjct: 630 YRNFCTKLWN-ATRFVLMNVEGKDCGVGATANEPMQFSFVDKWIISEFERTVKEVTTAYE 688

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +  +  A   + S V     D Y +  K  +L+ +  ++ +T  +  V V+  +  L   
Sbjct: 689 DYRLDNAANAIYSFVWNQYCDWYVELSKV-QLRGSEAEQRAT-RHTLVTVLEAVLRLAHP 746

Query: 465 FVPKLANKIFDILFVADENR 484
            +P +  +++  + V    R
Sbjct: 747 IIPFITEELWQKVSVTAGVR 766



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 19/171 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I           H+GHA+   + D L R+HR+ G + ++  GTD  G       
Sbjct: 39  KKPAFSIQLPPPNITGILHMGHAFNQTVMDTLTRYHRMAGYNTMWLPGTDHAGIATQIVV 98

Query: 63  QNA---------GVTTKVFVDQNSRNFR-------DMADVLD--ISYDDFIRTTEKRHHD 104
           +            +  + F+ +     +       +    +   + +D    T   +   
Sbjct: 99  ERKLEKEGISRRDMKREDFIAKIWEWQKFSGGTILEQMRRMGDSVDWDRLYFTMNPKLSK 158

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQH 154
                + K+ ++G IY+G     +  + ++  +D EV     DG  +  ++
Sbjct: 159 VVIETFVKLYEEGLIYRGKRLVNWDPKLQSAVSDLEVESEEADGHLWEIRY 209


>gi|313681840|ref|YP_004059578.1| valyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154700|gb|ADR33378.1| valyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 872

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 133/384 (34%), Gaps = 59/384 (15%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +    E +    G  Y    N V+    + +F R S      +    +      P    N
Sbjct: 332 FIEKIEEHTHQVGHCYR-CKNIVEPYISKQWFVR-SEVARGSIDKTNAGLTQFFPPHWIN 389

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY------------------------ 226
              +     L+D  +SR+   WG +I     DD  +                        
Sbjct: 390 -SYNAWMGDLRDWCISRQ-LWWGHRIPVFYCDDCGHEWASLEEHPSSCPHCSSKSFAQDP 447

Query: 227 -IMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            ++  W  +     +T G+ +              A+F+P  L + G DIL F    +  
Sbjct: 448 DVLDTWFSSALWPFSTLGWGNGDTAGDQLFQSEDMARFYPNTLLITGFDILFFWVARMMM 507

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                +  LP              G+K+SKS GNVIDP++++E+   DALR+ L      
Sbjct: 508 MGESFTGELPFNHIYLHALVRDEHGQKMSKSKGNVIDPLDMVEKYSADALRFTLAVLAVQ 567

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D     D L++  N    N + N  S+ + M +  +  +       T     +LS   
Sbjct: 568 GRDIRLSNDRLEQSRN--FTNKLFN-ASKFLQMNVPTFKDL-ADQEITTPLGRYMLSRFH 623

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVE 453
           R   E R  +     + A   +   +       +    W  EL K + +  + +      
Sbjct: 624 RATAETRAFLDEYRFNDAATVLYRFLW------NEFCDWGIELGKASKESVNELGS---- 673

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           + ++   LL  F+P +   ++  L
Sbjct: 674 IFKESMKLLHPFMPFITEYLYHEL 697



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   I         + HIGH+    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 35  KPDKHFAIMMPPPNVTGRLHIGHSLTFTLQDIIVRYKRMDGYMTLWQPGTDHAGIATQNV 94

Query: 62  AQN--------------AGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    +V+  +           R +      S + F  T ++ 
Sbjct: 95  VEKQLLAEGKTKEELGREAFLERVWAWKEESGGIMVGQLRKLGVSPAWSRERF--TMDEG 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
              + +  +  + ++  I +G Y   +   D A  + +  ++   G +Y+ ++
Sbjct: 153 LKSSVKEAFVHLYNQNLIVRGNYMVNWCTHDGALSDIEVEHEEHQGNFYHMRY 205


>gi|260583019|ref|ZP_05850801.1| valyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260093870|gb|EEW77776.1| valyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 136/417 (32%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQ 786



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|148826875|ref|YP_001291628.1| valyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|172048054|sp|A5UEN9|SYV_HAEIG RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|148718117|gb|ABQ99244.1| valyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 86/397 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            N  +        V V+ +L  L    +P +  +I+ 
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQ 766



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|145631357|ref|ZP_01787128.1| valyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983016|gb|EDJ90520.1| valyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 136/417 (32%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDSAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ +D  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQ 786



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+  GTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|119899197|ref|YP_934410.1| valyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166225519|sp|A1K9L8|SYV_AZOSB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|119671610|emb|CAL95523.1| ValS protein [Azoarcus sp. BH72]
          Length = 998

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 128/409 (31%), Gaps = 64/409 (15%)

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y+ W +   +   +    +      +Y+ +        EE       A  +  ++  +
Sbjct: 416 NTYNQWLNNIQDWCISRQLWWGHRIPAWYDDEGRIYVAANEEAALHAWKADLEAEIARLQ 475

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL-- 239
              +      +  E    +   L  L    +            + ++  W  +       
Sbjct: 476 GEVQSRQSQGQTAEQYPDLAERLSVLHARYEE-----GTLRQEEDVLDTWYSSALWPFST 530

Query: 240 --TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
              T  +    + +   + P+ + V G DI+ F    +      ++  +P          
Sbjct: 531 LDWTPEWPQKSNPALDLYLPSTVLVTGFDIIFFWVARMVMMTKHITGKIPFKHVYVHGLI 590

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE------------------------------------ 319
              +G+K+SKS GNV+DPI++I+                                     
Sbjct: 591 RDAEGQKMSKSKGNVLDPIDLIDGIGIDELVQKRTFGLMNPKQAQSIEKKTRKEFPEGIP 650

Query: 320 -VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G DALR+      + G+D  +D    +     +  N + N  +R V M  +  D  + 
Sbjct: 651 AFGTDALRFTFASLASPGRDIKFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGQDCGMD 707

Query: 379 TPG----------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                         F+ +D  I+S   R   E+    +          V   V +   D 
Sbjct: 708 PHEPGTCVPGGYLDFSFADRWIVSRLQRTEAEVAAQFEAYRFDLVARAVYEFVWDEYCDW 767

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K  +++   P++        + V+  +  L    +P +  ++++
Sbjct: 768 YLELAKV-QIQTGTPEQQRATRRTLLRVLETVLRLAHPLIPFITEELWE 815



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 22/155 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             I           H+GH +   I D L R+HR+ G + L+  GTD  G           
Sbjct: 38  FCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQL 97

Query: 60  ------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                       +         K +     +R  R +    D   + F  T ++    T 
Sbjct: 98  DAQGVSRHDLGREKFLEKVWEWKEYSGGTITRQMRRLGTSPDWKRERF--TMDEGLSKTV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+G     +  +     +D EV
Sbjct: 156 TETFVRLYNEGLIYRGKRLVNWDPKLGTAVSDLEV 190


>gi|300868849|ref|ZP_07113456.1| Leucyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300333200|emb|CBN58648.1| Leucyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 852

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 29  SDKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +  QN    R     L  S D    + T    ++   + L+ +    G  
Sbjct: 89  AIERRIPPEKWTYQNIAQMRYQLQQLGFSIDWSREVATCSPNYYRWTQWLFLQFFKAGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+      +F +++ Y ++LL+ 
Sbjct: 149 YQKEAAVNWDPIDQTVLANEQVDSE---GRSWRSGAIVERKMLRQWFLKITDYAEQLLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 206 LDKLSGWPERVKLMQANWIGKSVG 229



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 90/196 (45%), Gaps = 19/196 (9%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    EK+SKS  N +DP+EV+ + G D  R F++ +    KD  +D   +
Sbjct: 595 PKDPQTGEALEVFYEKMSKSKYNGVDPLEVMAKYGADTARMFILFKAPPEKDLEWDDADV 654

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +      N +  LV+   + +          P + ++ ++ +       ++E+ E+++
Sbjct: 655 EGQFR--FLNRVWRLVTEFGATLPNSVGKQEEVPTSLSKVEKDLRRAIHTAIKEVTEDLE 712

Query: 407 -NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +   + A+++++ L + +    D+       K +P        +  E +R L +LL  F
Sbjct: 713 GDYQFNTAVSEMMKLSNAIS---DSTC-----KDSP--------IYAEGMRTLILLLAPF 756

Query: 466 VPKLANKIFDILFVAD 481
            P +A +++ I+  ++
Sbjct: 757 APHIAEELWQIIGNSE 772


>gi|308177478|ref|YP_003916884.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744941|emb|CBT75913.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 829

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    + DV+AR+ RL G DV+   G D  G     AA
Sbjct: 37  SRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYWRLRGYDVMHPIGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N            IS  +D  + T++  ++   + L+ K  DKG  Y
Sbjct: 97  IKRNAHPAEWTYKNIDTQAASFKRYAISADWDRRLHTSDPEYYRWTQWLFNKFYDKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  +   +  +D+    +++V  GA           V       ++F+++ Y D+LL   
Sbjct: 157 RKDHPVNWCPKDQTVLANEQVVNGA----CERCGTAVTKKSLNQWYFKITDYADRLLED- 211

Query: 181 ESHPEFILPIERRNEVISF 199
               +   P        ++
Sbjct: 212 MDQLKGHWPERVLLMQKNW 230



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 104/300 (34%), Gaps = 40/300 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVI 263
            ++      G     D    M  ++D+   +L              K    + P   +V 
Sbjct: 489 WVNVACPKCGADAKRDTD-TMDTFVDSSWYFLRFVSPDYTEGPFDPKAVRDWMPVGQYVG 547

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   F         + A  P    + + G +L+ G+ +SKSLGN +D  E
Sbjct: 548 GVEHAILHLLYSRFFTKVIHDLGLIDATEPF-SALLNQGQVLNGGKAMSKSLGNGVDLGE 606

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +++ GVDA+R  ++       D   D   +    +         +   + S    DY  
Sbjct: 607 QLDKFGVDAVRLTMIFASPPEDDV--DWADVSPSGSQKFLARAWRIAQDTTSEAGADY-- 662

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                      D+++  V  R + E  + + +   +  +A+ + LV+             
Sbjct: 663 --------AAGDKALRQVTHRTVHESAQLLDSGKFNVVIAKTMELVNAT----------- 703

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
            +KT    A        E    +A LL  F P  A  +++ L  A       +  +D+ L
Sbjct: 704 -RKTIDSGAGATDPAVREAATVVAQLLSMFAPYTAEDMWEALGYAPSVVTSAWPEVDESL 762


>gi|255320934|ref|ZP_05362108.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380213|ref|ZP_06073368.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302103|gb|EET81346.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298407|gb|EEY86321.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 873

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 35  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 95  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 155 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 210

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 211 DTLKDGWPQQVLTMQRNWIGRSTGM 235



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 21/193 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 634 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 687

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R +   + K  +       A + + + +       +Q++ ++++ +   + A+A ++
Sbjct: 688 RVWRLATGFLEKGNNASNIDKTALSAAAQDLRRKTHETIQKVSDDIERRHAFNTAIAAMM 747

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +R+          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 748 ELLNANNRF--------EAKDDND-----VAVARESIMALLTLLAPFAPHLSQTLLAKFG 794

Query: 479 VADENRCFQSLDQ 491
                  F  +D+
Sbjct: 795 SDLTAALFPVVDE 807


>gi|118591434|ref|ZP_01548832.1| leucyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436106|gb|EAV42749.1| leucyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 873

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 6/218 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  +N    RD   ++ +S D      T +  ++   + L+ K  + G +Y+
Sbjct: 93  QNKVHPKDWTYENIATMRDQLKIMGLSLDWSREFATCDVAYYTQQQRLFLKFLEAGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S Y + LL   +
Sbjct: 153 KNAKVNWDPVDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISDYSEDLLEAID 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +   +   +    +       GL+      +    G K
Sbjct: 209 TLDRWPDKVRLMQKNWIGRSEGLRVRFEFTEAAPTGDK 246



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 63/425 (14%), Positives = 125/425 (29%), Gaps = 83/425 (19%)

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
            + E   N      G   Q Y     PV   ++ G            L    +  +   P
Sbjct: 420 PQAERQVNYRLRDWGISRQRYWGCPIPVIHCDDCGVVPEKDENLPVQLPDDINFDKPGNP 479

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           ++R               + S        +   D              +           
Sbjct: 480 LDRHPTW----------RNTSCPKCGKAARRETDTMDTFVDSSWYFARFTAPDCDQPTDP 529

Query: 250 GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-------PLPKKVFSHGFILHKG-- 300
            +   + P D ++ G +    H +Y   F  +             K +F+ G + H+   
Sbjct: 530 EAANGWLPVDQYIGGIEHAILHLLYSRFFTRAMQKVGALDLKEPFKGLFTQGMVTHETYR 589

Query: 301 ----------------------------------------EKISKSLGNVIDPIEVIEEV 320
                                                   EK+SKS  N +DP ++I+  
Sbjct: 590 IGEGANGRWIAPSEIRIEDADGKRRAVLVETGEDVAIGSIEKMSKSKKNTVDPTDIIDTY 649

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D  R+F++ +    +D  + +DG++         G    V R   +I    +   P  
Sbjct: 650 GADTARWFMLSDSPPERDVIWTEDGVQ---------GAWRFVQRVWRLIGDIAEKTEPRG 700

Query: 381 GAFTESD---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           G   E D     +     + L  +  +++    +RA+A++  LV+ + + F+        
Sbjct: 701 GKAPEVDGKALDLRRASHKTLAAVSADLEGLGFNRAVARLYELVNTISKVFNE------- 753

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKP 495
               +  +   Y   E    L  ++   +P LA + +  L   +      +   D+ L  
Sbjct: 754 ---GEADAGTEYAVREAADYLVQMMAPMMPHLAEECWSALGHDNLISEASWPQADEALLS 810

Query: 496 GFMLH 500
              + 
Sbjct: 811 DDTVT 815


>gi|118595199|ref|ZP_01552546.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440977|gb|EAV47604.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 810

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y      YP+ + H+GH     I DV++RF RL G +V+   G D  G     AA 
Sbjct: 32  KEKFYALCMFPYPSGKLHMGHVRNYAIGDVISRFKRLRGFNVMQPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    R+    L ++ D    I T +  ++   + L+ ++  KG +YK
Sbjct: 92  KNNTAPDKWTYANISEMRNQLKQLGLAVDWSREIATCDSSYYKWEQWLFIQLFKKGLVYK 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E   YF +++ Y + LL   +
Sbjct: 152 KTSMVNWDPVDKTVLANEQVIDG----RGWRSGEIVERKEIPQYFMKITDYAEDLLEGLD 207

Query: 182 SHPEFILPIERRNEVISFVKSG 203
              E+   ++           G
Sbjct: 208 ELNEWPEQVKTMQRNWIGKSVG 229



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 140/364 (38%), Gaps = 49/364 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q +     P+   E+ G            L    S      P+++    ++ V  
Sbjct: 416 WGISRQRFWGCPIPMIKCEKCGDIPESEQNLPIKLPSEISIDASGSPLKKLETFLNCVCP 475

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
            L     +R+T            +  Y   D                  +A +W P D +
Sbjct: 476 -LCGSQATRETDTLDTFFESSWYFARYASFDQ----------DKQMLDKRANYWLPVDYY 524

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   F         ++   P  KK+ + G +L  G K+SKS GN +DP
Sbjct: 525 IGGIEHAILHLLYARFFNRLLYDLKLINTKEPF-KKLLTQGMVLKDGAKMSKSKGNTVDP 583

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            ++I++ G D  R F++      +   +  +G++              + R   ++ +  
Sbjct: 584 QDLIDKYGADTARLFIMFAAPAEQSLEWSDEGIEGS---------HRFLKRLWKLVYEFI 634

Query: 374 DGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQ 431
           D       +   E ++ +    +  ++++ ++++ +   + A++ ++ L++ +       
Sbjct: 635 DHKEEQETSNVIEINQELKYKLNATIEKVTDDLERRTSFNTAISSIMELMNML------- 687

Query: 432 KPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQS 488
                  T   + +TV  +   EV+ +  ILL  FVP ++  +++ + + D  E++ + S
Sbjct: 688 -------TKTTQNNTVGPLLRKEVLNKALILLSPFVPHISKFLWEKINLNDSFEDQSWPS 740

Query: 489 LDQR 492
           +D +
Sbjct: 741 VDSK 744


>gi|92115730|ref|YP_575459.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|122990360|sp|Q1QRZ8|SYL_NITHX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91798624|gb|ABE60999.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 878

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHIGHVRNYTLGDVIARYMRAKGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N +  +     + +S D      T +  ++   + ++      G   +
Sbjct: 93  ERKVAPKAWTYDNIKAMKKQLRSIGLSLDWAREFATCDPSYYKHQQKMFLDFLRAGLAER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 153 EKRKINWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITKYSQELLEALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +            GL
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 12/179 (6%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G++    +     +  
Sbjct: 629 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVQGA--SRFMQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV+ S              P  F     ++       L ++   ++    +  LA +   
Sbjct: 687 LVNESAE---AGKAAPRDKPATFGTDALALRKAAHGALDKVSTGIERLHFNVCLANIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +         +      T     +  + +   E    L  L    +P L+ + +  L 
Sbjct: 744 AN------TLAETLARFGTRTSDLAPDIAWSLREAATILVQLFSPMMPHLSEECWHALG 796


>gi|67459043|ref|YP_246667.1| leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536521|sp|Q4ULS1|SYL_RICFE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67004576|gb|AAY61502.1| Leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 835

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N +     +  SYD    I + + +++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKDWTYSNIENMKKQLKSMGFSYDWSREINSCDPQYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+    + +F +++ Y ++LL+ 
Sbjct: 144 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 130/389 (33%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C        D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEACGIVPVPCSDLPVTLPDDVSFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                SA ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKSAIRETDTFDTFFESSWYFTRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID + + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLVTMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N + ++     S+I              +E ++ +  +    ++ + ++
Sbjct: 645 GIEG--CSRFINKLEHMFEAIASLI----------DDVNSEINKELNRLVHFTIKHVADD 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++ +++RA+A++  L + +          EL K   D   TV Y        +  LL  
Sbjct: 693 IKHFVLNRAIARMRELSNAISA--------ELNKEVVD-VKTVRY----GFNVIVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKERLYNSAFPAFDE 768


>gi|293390451|ref|ZP_06634785.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950985|gb|EFE01104.1| valyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 954

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 133/417 (31%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    +  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLAEVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYL 245
           WG  I    D +  +YV                            W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNIYVARSEAEVRSKYQLNPDVALKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
                 K      D+ + G DI+ F       F +           +P      +     
Sbjct: 497 QKTKELKMFH-STDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
             G+K+SKS GNVIDP+++I+ +                                     
Sbjct: 556 ENGQKMSKSKGNVIDPLDMIDGISLEDLVAKRTGNMMQPQLAEKIAKSTRKEFPEGIVAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L      G+D  +D   L+     +  N + N  SR V    K    +    
Sbjct: 616 GTDALRFTLAALATNGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLTNEKL--DLSQGE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
              + +D  I S  +R ++  R  +           +         D Y +  KP     
Sbjct: 671 IELSVADRWIQSEFNRTVETFRNALSQFRFDLCATALYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNQAQIRAASQTLVHVLEKLLRLAHPVIPFITEEIWQKVKGFVGIDADSIMLQPFPQ 786



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
               I+          H+GHA++  + D L RF+R++G + L+  GTD  G       + 
Sbjct: 39  PSYSIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVER 98

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               K++  +       S+  R + + +D + + F  T +    
Sbjct: 99  KIAAEENKTRHDYGREAFIDKIWEWKAQSGGTISQQIRRLGNSVDWTRERF--TMDDGLS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           D  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 157 DAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|281425722|ref|ZP_06256635.1| valine--tRNA ligase [Prevotella oris F0302]
 gi|281400130|gb|EFB30961.1| valine--tRNA ligase [Prevotella oris F0302]
          Length = 898

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 122/374 (32%), Gaps = 51/374 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    S      P + +N         +KD  +SR+   
Sbjct: 365 PIEPKLSTQWFLKMQHFADLALGPVMSDEIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 422

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                            +  W  +   
Sbjct: 423 WGHRIPAYYFTNTDGKRDFVVAATIEEALAKAKTKNSTLTVNDLKQESDSLDTWFSSWLW 482

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    +++PD  +   ++P    V   DI+ F    +    +      P     F+  
Sbjct: 483 PISVFDGVNHPDNEEINYYYPTSDLVTAPDIIFFWVARMIMAGYEYRKTYPFKHVYFTGI 542

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 543 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 599

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++       I  P     + E   +    V  E+++  +   I  AL
Sbjct: 600 ---FNNKIWNAFRLVKGWQAADIEQPTCNKLAVEWFAAKLKEVNAELQDQFKQYRISEAL 656

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  L  +     Y +  KP  +              T+     L  +L  F+P +  +
Sbjct: 657 MTVYKLFWDEFSSWYLEMVKPAYINGEAQPIDQKTYDATIGFFDNLLKMLHPFMPFITEE 716

Query: 473 IFDILFVADENRCF 486
           ++  +    E    
Sbjct: 717 LWQHIADRKEGESI 730



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   I           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        +  ++          L  S  +D    T +     
Sbjct: 92  VGKLAEKGIKKTDLSREEFLEHAWDWTHEHGGIILKQLRKLGCSCDWDRTAFTMDDTRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 GVIKVFCDLYEKGLIYRGVRMVNWDPKAQTALSDEEVIYKDEH 194


>gi|148927968|ref|ZP_01811369.1| aminoacyl-tRNA synthetase, class Ia [candidate division TM7
           genomosp. GTL1]
 gi|147886686|gb|EDK72255.1| aminoacyl-tRNA synthetase, class Ia [candidate division TM7
           genomosp. GTL1]
          Length = 629

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 70/403 (17%), Positives = 146/403 (36%), Gaps = 28/403 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G  YK        ++D+ + +   +    +      +   +Q+         L    
Sbjct: 119 HSVGHCYKCGTVIQPLMKDQWFLS---MRPLVEKAKKVIEAGDIQFTPSNSKRVLLQYLD 175

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +           + +PI    + I      + D  + R+T + G       +     W  
Sbjct: 176 NLRDWNLSRQIPWGIPIPAF-QNIDNPDDWIFDSRVDRETIEVGGYTYKREEDTFDTWFS 234

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +      TT YL+      +KF+P D+   G D+L      +      ++  +P  K V+
Sbjct: 235 SGQWPFITTDYLEGG--ELSKFYPTDMMETGHDLLDRWVARMIMLGLYMTDKVPF-KNVY 291

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            HG +L + G+K+SKS GNVI+P+++I + G DA R  ++   + G++  +    +    
Sbjct: 292 MHGMVLDEHGQKMSKSKGNVINPMDIINKYGSDAFRLGIIASRSAGQNQAFSTTKVVA-- 349

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             + AN + N+       + + +    P P   T +D  I+   +   +EI   + +   
Sbjct: 350 GRNFANKLWNIARFIEDRVGEKFKNRAPEPQ--TIADHWIIRELNTASEEIDRLLSDYRF 407

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             A   V   + +   D Y +A K                 +   V+     L   F P 
Sbjct: 408 AEATEVVYHTIWDNVADWYVEASK-----------RQNNPGMLAWVLETSLKLAHLFAPF 456

Query: 469 LANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +   I++ L   +     ++  +  +   +    F+ +  + +
Sbjct: 457 VTETIWETLQWDEGLLINETWPEPAQFHDIAAAEFEQL-QKLV 498


>gi|257460757|ref|ZP_05625858.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442088|gb|EEV17230.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 815

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D L+R++RL G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYSIGDALSRYYRLRGYNVLQPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY+ 
Sbjct: 91  HGIHPKTWTYENIDYMKNELHRLGFSFSARRMLATSDPLYTRWEQEFFIKLFEKGLIYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V +G          N V   +  GY+ +++AY  +LL   + 
Sbjct: 151 SAVVNWCEHDQTVLANEQVEEG----RCWRCGNEVVQKQMPGYYLKITAYAQELLDCLKQ 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LEGKWPAQVLTMQENWIGRSEGL 229



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 91/264 (34%), Gaps = 32/264 (12%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA 282
           D  +    +     +   T       + S   +   D ++ G +    H +Y   F  + 
Sbjct: 498 DTFFESSWYFARYASDERTWQQRAFDEQSVNYWMNVDQYIGGIEHAILHLLYARFFQKAL 557

Query: 283 -------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                  +    +++ + G +L  G K+SKS GN +DP ++IE  G D  R F++     
Sbjct: 558 RDIGYLRDSEPFERLLTQGMVLKDGAKMSKSKGNTVDPDDIIETYGADTARLFMLFAAPP 617

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K+  ++   ++       A    + +                   A  + ++       
Sbjct: 618 QKELEWNDSAVEG------AYKFLSRLYDRAENAYATDKIPQIDHAALNKEEKYARLKVY 671

Query: 396 RVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             L++ ++  + +   +  +A  +  ++ ++                  A +   V  E 
Sbjct: 672 EALKKSQQVYESSFAFNTLIAACMEALNALN------------------AQSNKDVFTEG 713

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
              +  LL+  VP +  ++ + LF
Sbjct: 714 YFVILCLLEPIVPHICAELSERLF 737


>gi|257063414|ref|YP_003143086.1| leucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791067|gb|ACV21737.1| leucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 852

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R K Y+     YP+   H+GHA    I DV AR+  + G DVL   G D  G     A
Sbjct: 29  SDRPKKYVLEMFPYPSGDIHMGHARNYTIGDVTARYATMRGFDVLHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A        V+  QN    +     +  SY  D  +   +  ++   + ++++   +G +
Sbjct: 89  AIKRNSHPAVWTYQNIDTQKASFKRMGFSYDWDRMVVACDPEYYRWGQWIFEQFWKRGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +         +++V +G          + V+  +   ++ +++ Y  +LL  
Sbjct: 149 ERRNSPVNWCPSCATVLANEQVIEGK----CWRCDSEVEKRDLTQWYLKITDYAQELLDD 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++++         G
Sbjct: 205 LDQLDGWPERVKQQQANWIGRSEG 228



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 97/262 (37%), Gaps = 22/262 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP----- 276
           D              Y          D +KA  W P D ++ G +    H +Y       
Sbjct: 517 DTMDTFTCSSWYYMRYTDAHNSEAPFDPAKANAWLPVDQYIGGIEHAILHLLYSRFFTKV 576

Query: 277 ---AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +L+ + P    +     +   G+ +SKS GNV+ P  +I+  G DA+R +++   
Sbjct: 577 LRDCGMLNFDEPFKNLLCQGMVLDSNGDVMSKSKGNVVSPEVMIDSYGADAVRAYILFMA 636

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILS 392
              K+  +++DGL         N    +V+  V    ++ Y     T      +   +  
Sbjct: 637 PPDKELLWNEDGLAGLY--KFLNRAWRIVNDLVGCADENTYFQEAGTQQQIEAAAAKLKR 694

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              RV+ ++  + +    + A++ ++ L +    Y        L+ T  D       +T 
Sbjct: 695 ERHRVVGKVAADFERNNFNTAISAIMELCNAATDY--------LRITPADARDAA--LTA 744

Query: 453 EVIRQLAILLQAFVPKLANKIF 474
           EV   L +L+    P  A +++
Sbjct: 745 EVAEVLVLLMAPITPHWAQELW 766


>gi|75911132|ref|YP_325428.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731296|sp|Q3M3A3|SYL_ANAVT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|75704857|gb|ABA24533.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 872

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 76/204 (37%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  SNKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    R     L   I +D  + T    ++   + ++ +    G  
Sbjct: 90  AIDRGVPPANWTYQNITQMRQQLQRLGLSIDWDSEVATCSPDYYKWTQWIFLQFLQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    +          V+      +F +++ Y ++LL+ 
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV---DNEGRSWRSGAIVERKLLRQWFLKITDYAEELLND 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 207 LDKLTGWPERVKLMQANWIGKSVG 230



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 106/322 (32%), Gaps = 75/322 (23%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              +          + +K   W P D +V G +    H +Y   
Sbjct: 507 KRETDTMDTFIDSSWYFLRFTDARNEAQVFESAKTNDWMPVDQYVGGIEHAILHLLYSRF 566

Query: 278 FL--------LSANLPL----------------------PKKVFSHGFILHKGEK----- 302
           F         L+ + P                        K V SH    +         
Sbjct: 567 FTKVLRDRGLLNFDEPFERLLTQGMVQGLTYFNPNKGGKDKWVPSHLVNPNDPRDPQTGE 626

Query: 303 --------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                   +SKS GN + P +VI + GVD  R F++ +    KD  +D+  ++       
Sbjct: 627 PLQRLYATMSKSKGNGVAPEDVIAKYGVDTARMFILFKAPPEKDLEWDEADVE------- 679

Query: 355 ANGIGNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
             G    ++R   ++              G  ++S++ +       +Q + E+++     
Sbjct: 680 --GQFRFLNRVWRLVTDYVASGVNPKNKSGELSKSEKDLRRAIHSAIQSVTEDLEDEYQF 737

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A+++++ L + +                 D       V  E I  L +LL  F P +A
Sbjct: 738 NTAISELMKLSNAL----------------TDANGKDSRVYAEGIHTLVVLLAPFAPHIA 781

Query: 471 NKIFDILFVADE--NRCFQSLD 490
            +++ +L  ++    + + + D
Sbjct: 782 EELWQLLGNSESVHTQTWPAFD 803


>gi|77409780|ref|ZP_00786432.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77171610|gb|EAO74827.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 655

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 112/306 (36%), Gaps = 37/306 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+      +F ++       ++  ++  +      R N+        + D  +SR+   W
Sbjct: 353 VEPRLSTQWFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISRQ-LWW 411

Query: 217 GIKI---------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           G +I                         + ++  W  +     +T G+ D       ++
Sbjct: 412 GHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAADFKRY 471

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P    V G DI+ F    + + +   +   P    +        +G K+SKSLGN IDP
Sbjct: 472 FPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDP 531

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VIE+ G DALR+FL    A G+D  +  + +    N    N I N +SR + M  +  
Sbjct: 532 MDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWN--FINKIWN-ISRYILMNNEGL 588

Query: 374 DGMIPTPGAF--------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
                               +D  IL   +  + ++ EN        A   + + + E  
Sbjct: 589 TLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTENFDKFEFGVAGHILYNFIWEEF 648

Query: 424 VDRYFD 429
            + Y +
Sbjct: 649 ANWYVE 654



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I         + H+GHA++  + D++ R  R+ G D L+  G D  G       
Sbjct: 35  EAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKV 94

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + D+ +   +     + +S D      T ++    
Sbjct: 95  EERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLSK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             R ++  + +KG IY+G +   +        +D EV  
Sbjct: 155 AVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH 193


>gi|298529743|ref|ZP_07017146.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511179|gb|EFI35082.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 834

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R + Y+     YP+ + H+GH     I DV+AR   + G +VL   G D  G     A
Sbjct: 32  TDRPRYYVLEMFPYPSGRIHMGHVRNYSIGDVVARMKMMQGYNVLHPMGWDAFGMPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  QN    R     L  SYD    + T    ++   ++ + K  +KG +
Sbjct: 92  AIKNNTHPAHWTYQNIDYMRSELKRLGYSYDWSRELATCHPGYYQWEQLFFLKFYEKGLV 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G          + V+  E   +F R++ Y ++LL  
Sbjct: 152 YRKKAPVNWCPTCVTVLANEQVEAGQ----CWRCDSMVEKRELSQWFLRITDYAEELLKD 207

Query: 180 YESHPEFILPIERRNEVISF 199
                    P    +   ++
Sbjct: 208 L-DQLSGGWPERVISMQKNW 226



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 85/235 (36%), Gaps = 23/235 (9%)

Query: 254 KFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKIS 304
           K+W P D ++ G +    H +Y   F            N P    + + G +L  G K+S
Sbjct: 530 KYWLPVDQYIGGIEHAILHLLYARFFVKALRDLGYWDLNEPFA-NLLTQGMVLKDGAKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP E+I   G D +R + +      KD  +    ++        N +   V  
Sbjct: 589 KSKGNVVDPDEMIRRFGADTVRLYCLFASPPEKDLEWSDSAIEGSYR--FLNRLWRTVHE 646

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSE 423
              +I      +       T  ++ + +     ++    +M      + A+A  + L++ 
Sbjct: 647 LSGVISPVGPCLAMEGQGLTPEEKELRAAEHEAMRRATRDMLDRFQFNTAIAACMELLNT 706

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +      ++      + P        V    +  +  +L    P +  +++  + 
Sbjct: 707 IG---QHRESLRQSPSGPQ-------VLSSALSTVLTVLAPITPHICEELWSHMG 751


>gi|157787151|ref|NP_001099171.1| probable leucyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|156229821|gb|AAI51832.1| Zgc:165522 protein [Danio rerio]
          Length = 891

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 5/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R+K Y+ +   YP+ + H+GH     I+D ++ F ++ G  VL   G D  G     A
Sbjct: 66  SSRKKFYVLSMFPYPSGRLHMGHVRVYAISDTISHFQKMRGHQVLNPMGWDAFGLPAENA 125

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N  + R   D L + +  D  I T    ++   + L+ K+ + G  
Sbjct: 126 AIERNLDPEDWTRSNIESMRTQLDSLGLCFNWDREITTCLPDYYKWTQYLFIKMFEAGLA 185

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    D++V    +         PV+    + +F + + Y   LL  
Sbjct: 186 YQKEALVNWDPVDQTVLADEQV---DENGCSWRSGAPVEQKMLKQWFIKTTNYAKPLLDA 242

Query: 180 YESHPEFILPIERRNEVISFVK 201
               PE+      +   I    
Sbjct: 243 LADLPEWYGVKSMQANWIGDCS 264



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 59/416 (14%), Positives = 130/416 (31%), Gaps = 47/416 (11%)

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-DEVYKGADG 147
           I+ D+F   + +   ++     ++++  G +       W   R   +      V+ G+ G
Sbjct: 396 INSDEFTGQSREEAFNSVTQKARQMNVGGHLTSAKLRDWLISRQRYWGTPIPIVHCGSCG 455

Query: 148 QYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--------------ER 192
                +   PV   +      + ++       +                           
Sbjct: 456 PVAVPEDELPVTLPKIPALTGKGASPLKTAEDWLNCQCPRCKGPAERETDTMDTFVDSSW 515

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPD--DPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                +  ++ L+    SR      + +        +M+++     ++      +     
Sbjct: 516 YYFRYTDPQNPLRPFERSRADHWMPVDVYIGGKEHAVMHLYYARFLSHFCRDQSMTAHRE 575

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
              K     L       L     Y     +    P P +  S   +    EK+SKS  N 
Sbjct: 576 PFRKLLVQGLIKGQTFTLEHTGQYLKKEDIDFTGPDPVEKSSGRRLTVTWEKMSKSKHNG 635

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP EV+++ G+  LR +L+      +D  +D          D   G+    SR   ++ 
Sbjct: 636 VDPQEVLQQYGISTLRLYLLYAAPPEQDILWDVK-------TDAIPGVLRWQSRLWGLVS 688

Query: 371 K----DYDGMIPTPGAFTESDESILSVC----SRVLQEIRENM-QNQLIHRALAQVISLV 421
           K          P P    + + S         +  L ++  +  ++ L + A+++++ L 
Sbjct: 689 KLRSVREGPETPNPSILNKRERSEAKKIWDNKNYTLTQVTGHFTEDFLFNAAISRLMGLT 748

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +     A     L     + A          +  L I+     P LA +++  L
Sbjct: 749 NTLS---QASTRVVLHSVEFEDA----------LASLCIMAAPMCPHLAPELWAGL 791


>gi|301754011|ref|XP_002912800.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281343577|gb|EFB19161.1| hypothetical protein PANDA_000601 [Ailuropoda melanoleuca]
          Length = 903

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 79/201 (39%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +A F ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIAWFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N  + R   D L    S+D  I T    ++   + L+ K+ + G  
Sbjct: 139 AIERNLHPESWTQSNIEHMRRQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 198

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + +A+   +   
Sbjct: 199 YQKEALVNWDPVDQTVLANEQVDERGCSWRSGAK---VEQKYLRQWFIKTTAFAKAMQDA 255

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 256 LVDLPEWYGIKGMQAHWIGDC 276



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 103/318 (32%), Gaps = 63/318 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ +        K   D              Y          + + A +W P DL++ GK
Sbjct: 502 VNCACPRCKGAAKRETDTMDTFVDSAWYYFRYTDPQNTQSPFNAALADYWMPVDLYIGGK 561

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 562 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLTQGLIKGQTFRLPSGQYLRREEVDLTG 621

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+++ G+D +R +++      KD  +D  
Sbjct: 622 AVPVHAETKEKLEVTWEKMSKSKHNGVDPEEVVQQYGIDTIRLYILFAAPPEKDILWD-- 679

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES----ILSVCSRVLQE 400
            +K      +      L +     I     G  P P   ++ + +    +    + V+ E
Sbjct: 680 -VKTDALPGVLRWQQRLWALVTRFIEARASGTAPRPQLLSDDERAESRKLWEYKNSVISE 738

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +  ++  ++  ++Q++ L S +     A +   L     + A          +  L 
Sbjct: 739 VTAHFTEDFSLNAVISQLMGLSSAL---LQASQRVVLHSPEFEDA----------LCALM 785

Query: 460 ILLQAFVPKLANKIFDIL 477
           ++     P + ++++  L
Sbjct: 786 VMAAPMAPHITSELWAGL 803


>gi|296134649|ref|YP_003641891.1| leucyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295794771|gb|ADG29561.1| leucyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 876

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 6/219 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  EK Y  + + YP+ + H+GH     I D+L R  R++G +VL   G D  G     A
Sbjct: 30  KPGEKFYACSMLPYPSGKLHMGHVRNYTINDMLTRHLRMNGHNVLMPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +   I +   + T    ++   + L+ K+ +KG  
Sbjct: 90  AMKNKVPPAKWTYDNIAYMKRQMQAMGLAIDWSREVATCSPEYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+    +++V  G            V+  E  GY+ +++ Y ++LL+ 
Sbjct: 150 ERRTQVVNWDPVDQTVLANEQVIDG----RGWRSGAVVEKREIPGYYLKITDYAEELLAA 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                +          V    ++ +   +  R  F   I
Sbjct: 206 VADPEDKNYLAGWPERVRLMQENWIGKSAGVRFAFPHTI 244



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 59/180 (32%), Gaps = 23/180 (12%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N +DP ++I+  G D  R F +          ++   ++         G    +
Sbjct: 639 MSKSKNNGVDPQDLIDRYGADTARLFTMFAAPPEATLEWNDAAVE---------GAHRFL 689

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  +  LK    +        ++   +     + LQ++  +      +  ++  + L++
Sbjct: 690 KRVWAFGLK-LSALAAPAAEAGDAARKLRREVHQTLQQVNFDYGRMQYNTVVSGAMKLLN 748

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                          +     A  +     E    L  +L    P +A+ ++  L    E
Sbjct: 749 A-------------LEGADAAAGGMAVALREGFGILLRVLYPATPHIAHALWQELGYGAE 795


>gi|27377246|ref|NP_768775.1| hypothetical protein blr2135 [Bradyrhizobium japonicum USDA 110]
 gi|27350389|dbj|BAC47400.1| blr2135 [Bradyrhizobium japonicum USDA 110]
          Length = 525

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 89/500 (17%), Positives = 156/500 (31%), Gaps = 68/500 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
              +I  A   PN + H+GH     + AD+  RF R+ G    + TG+DEHG    + A+
Sbjct: 2   RTYFICPAPPCPNGKLHLGHIGGVYLPADIFVRFQRMAGHRAYYITGSDEHGTYTLETAR 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G +     +       +    + I+ D F+RT+   H      +++++   G +    
Sbjct: 62  KLGRSFSEVAEGYVHKILECLRAVQITPDVFVRTSSAIHKGNALAIFRELQAAGYVDVRQ 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM----------------EEEGYFF 167
               Y    + +  D                N  +                         
Sbjct: 122 GVQLYCEHCDEFAADSLATGRCPACSSPCDSNLCENCGLALQHDTIRDARHVTCGCNLVL 181

Query: 168 RLSAYQDKLLSYYESHPE-----FILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           R        +              + P   R +  +++   ++ L ++R  F  G+++  
Sbjct: 182 RPITQAVFDMPRLAHSLHEAIGESVWPEPIRAKARAWLHREVRGLPMTRH-FRHGVEVKQ 240

Query: 223 DP---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIY 274
                   +  W + L  + T         G  A     D     L  +G+D   ++ + 
Sbjct: 241 PDSLIGQTLLTWFEGLWCFDTGIREQCARAGLDANAALHDQNTEILFFMGQDNRFYYTLG 300

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EI 333
               LL+   P+PK      F   KGEK S S  + +   EV  +VG + LRY L R   
Sbjct: 301 VAGALLARGYPIPKNHSVQDFYKLKGEKFSTSRDHALWGDEVAGDVGPNVLRYALARVAK 360

Query: 334 ACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             G D   +  DGL    +        + + R                 A T     +  
Sbjct: 361 PFGTDANDFSLDGLVSAASR--IRVWEDALRRCA-------------ESARTVESTELSP 405

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              R  ++  + +       AL     ++            +EL        +     T 
Sbjct: 406 NFRRFAEDYADAVTALRFWDAL----DIIDRC---------FELAGF-----AHADDWTW 447

Query: 453 EV--IRQLAILLQAFVPKLA 470
               I     LL   VP+LA
Sbjct: 448 NAAQISLFLSLLYPVVPELA 467


>gi|256425193|ref|YP_003125846.1| valyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040101|gb|ACU63645.1| valyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 881

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 87/504 (17%), Positives = 163/504 (32%), Gaps = 74/504 (14%)

Query: 27  EMIIADVLA-------RFHRLDGL-------DVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
           E I+ D          R+  L G        +       D +  K         VT    
Sbjct: 225 ETIMGDTAICVNPDDDRYKHLAGHFAIVPLVNRRVPIIFDTYVDK-EFGTGALKVTPAHD 283

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           ++  +   +   +V+D   DD   T               +    D +K       +L +
Sbjct: 284 INDYNLGLKHNLEVVDTLNDD--GTLSPAA---------GVFIGEDRFKARKKVIAALDE 332

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           +     ++ Y    G         V+      +F +++      L         I P +R
Sbjct: 333 QGILVKEQEYTTRLGYSERNPDTVVEPRISTQWFVKMAELAKPALDAVVDGNVKIHPGDR 392

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY------------------------ 226
                 +    +KD  +SR+   WG  I     P                          
Sbjct: 393 FLATYKYWMENVKDWCISRQ-LWWGQQIPAFYAPDGTFEVAQNVDTAIAQFKAKGATYTA 451

Query: 227 --------IMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYW 275
                    +  W  +    +     +  PD  +   ++P ++ V G+DI+ F    +  
Sbjct: 452 ADLRQDEDCLDTWFSSWLWPMEVFNGISQPDNEEINYYYPTNVLVTGQDIIFFWVARMIM 511

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                    P     F+      +G K+SK LGN  D +E+I++ G DA+RY ++     
Sbjct: 512 AGQEYRNEKPFSDVYFTGMVRDKQGRKMSKQLGNSPDLLELIDKYGADAVRYGIMISSPA 571

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D   L+  + +  +N I N + + V M   +             +     S  +
Sbjct: 572 GNDLLFDDAALE--LGSKFSNKIWNAL-KLVKMWEAN-TAGDANAAVDHFAVRWFESRLN 627

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            V  ++ E   +  ++ AL  V SL+ +     Y +    W          + +   TV 
Sbjct: 628 EVKVQLAEEFADFKLNEALKTVRSLIWDDFCSWYLE----WVKPGFEQPCDAGIYAKTVY 683

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
              +L  LL  F+P +  +++ +L
Sbjct: 684 FFEELMQLLHPFMPFVTEEVYQLL 707



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GH     + D+L R  R+ G +  +  G+D          
Sbjct: 32  NRPPFTIVIPPPNVTGVLHMGHTLNETVQDILVRRARMSGYNTCWVPGSDHASIATEAKV 91

Query: 63  QNAGVTTK-----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            N   T K                  + D+      +    L  S  +D    T +  ++
Sbjct: 92  VNMLKTEKGIEKSQLTREEFLKYAFEWKDKYGGIIYNQIKKLGCSCDWDRVTFTMDDHYY 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                ++  +  KG IY+G     +  + +   +D+EV  
Sbjct: 152 QAVIKVFVDLYGKGLIYRGARMINWDPKAKTALSDEEVQY 191


>gi|215484666|ref|YP_002326901.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|226731221|sp|B7H051|SYL_ACIB3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|213987319|gb|ACJ57618.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 874

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +  YI +   YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA
Sbjct: 36  EGKHRYILSMFPYPSGKLHMGHVRNYTIGDVISRFYRLKGEAVLQPMGWDAFGLPAENAA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY
Sbjct: 96  IAHKVAPAKWTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSY 179
           +   +  +   D+    +++V  G            V+  +   Y+FR++ Y Q+ L   
Sbjct: 156 RKLSTVNWDPVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDL 211

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
                 +   +           +G+
Sbjct: 212 DTLQDGWPQQVLTMQRNWIGRSTGM 236



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 21/192 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++      +   +   G++       AN    
Sbjct: 635 EKMSKSKNNGIDPQAIIDQYGADTARVFMMFAAPPDQSLEWSDAGVEG------ANRFLK 688

Query: 361 LVSR-SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
            V R   S + K            ++  + +       +Q++ ++++ +   + A+A ++
Sbjct: 689 RVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNTAIAALM 748

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L++  +++          K + D     + V  E I  L  LL  F P L+  +     
Sbjct: 749 ELLNASNKF--------EAKDDND-----VAVEREAITTLLTLLAPFAPHLSQTLLAQFG 795

Query: 479 VADENRCFQSLD 490
                  F  +D
Sbjct: 796 TDLTEATFPEVD 807


>gi|261880523|ref|ZP_06006950.1| valine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332746|gb|EFA43532.1| valine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 897

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 130/368 (35%), Gaps = 59/368 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L+          P + +N         +KD  +SR+   
Sbjct: 368 PIEPKLSTQWFLKMQHFADIALAPVMDDDIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 425

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     +  W  +   
Sbjct: 426 WGHRIPAYYFEDENGKRDCVVAESVEQALAEAQKKNPSLQAADLEQESDCLDTWFSSWLW 485

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    ++NPD  + K++ P    + G DI+ F    +    +     LP     F+  
Sbjct: 486 PISVFDGVNNPDNEEIKYYYPTSDLITGPDIIFFWVARMIMAGYEYRDTLPFKHVYFTGI 545

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 546 VRDKLGRKMSKSLGNSPDPLMLIEKFGADGVRMGMMLSAPAGNDILFDESLCEQGRN--- 602

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++       +  P     +     +    V  +I E  +   I  AL
Sbjct: 603 ---FNNKIWNAFRLVQGWETADLAQPTENKLAVSWFAAKLREVNADINEQFKGYRISEAL 659

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P+  + +  VT +       +L  +L  F+P + 
Sbjct: 660 MTVYRL------FWDEFSSWYLEMIKPEYGNPIDQVTYDATLGFFDELLRMLHPFMPFIT 713

Query: 471 NKIFDILF 478
            +++  ++
Sbjct: 714 EELWQHIY 721



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  NREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T ++    
Sbjct: 92  VNKLAEQGIKKSDLSREEFLEHAWDWTHEHGGIILKQLRKLGCSCDWDRTAFTMDEIRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|167749675|ref|ZP_02421802.1| hypothetical protein EUBSIR_00633 [Eubacterium siraeum DSM 15702]
 gi|167657298|gb|EDS01428.1| hypothetical protein EUBSIR_00633 [Eubacterium siraeum DSM 15702]
          Length = 1061

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 68/448 (15%), Positives = 137/448 (30%), Gaps = 16/448 (3%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    D  G   A+          VFV +         D   + +D     
Sbjct: 352 KVGRKYDLPFVQLVDGKGNMTAETPYAG-----VFVKKADPMVLKDLDEKGLLFDAPKFE 406

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               H   C       + +    K        +R+    N      G +      ++  V
Sbjct: 407 HSYPHCWRCDTPLLYYARESWFIKMTAVKDDLIRNNETINWIPESVGKNRFGDWLEN--V 464

Query: 158 QWMEEEGYFFRLSA---YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           Q        +  +    ++ +    +       L     N             +++ K  
Sbjct: 465 QDWGLSRNRYWGTPLNIWECECGHKHAIGSIEELKSMSDNCPDDIELHRPYIDAVTIKCP 524

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G ++   P+ ++  W D+ +       Y         + +PAD      D     F++
Sbjct: 525 HCGKQMKRVPE-VIDCWFDSGSMPFAQHHYPFENKEKFEQQFPADFISEAVDQTRGWFYS 583

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + LL    P    +     +   G+K+SKS GN +DP E + E G DA+R++    
Sbjct: 584 LLAISTLLFNKAPYKNVIVLGLVLDKDGQKMSKSKGNAVDPFESLAEHGADAIRWYFYTN 643

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESI 390
            A      +    + +     ++          +   + ++D           +  D+ +
Sbjct: 644 SAPWLPNRFHAKAVNEGQRKYISTLWNTYAFYVLYANIDNFDATKYTLDVDKLSVMDKWL 703

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS  + V+ E+ +N+ N  I  A   +   V E+ + Y    +     K           
Sbjct: 704 LSRLNTVVGEVDDNLANYRIPEAARALQDFVDEMSNWYVRRSRERFWSKELTQDKINAYM 763

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A       P + + I+  L
Sbjct: 764 TLYTALVTIAKTSAPMTPFVCDDIYRNL 791



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G DV    G D HG  +   
Sbjct: 50  KGDKTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYDVPRKAGWDTHGLPVELE 109

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + + +  +      DD   T +   
Sbjct: 110 VEKMLGLDGKDQIEKYGLDPFITKCKESVWKYKGMWENFSRTVGFWADMDDPYVTYDNNF 169

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 170 IESEWWALKQIWEKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 213


>gi|257052895|ref|YP_003130728.1| isoleucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691658|gb|ACV11995.1| isoleucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 1068

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 6/256 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW+D+      T  Y +  +    + WPADL +   D     F +           +
Sbjct: 539 VFDVWLDSSVASWGTLDYPEQTE-DFEELWPADLIMEAHDQTRGWFWSQLGMGTAAVGEI 597

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     ++  G  +SKS G  ++P E I E G D +R FL+ +   G+D  +  D
Sbjct: 598 PYDEVLMHGYAMMPDGRGMSKSKGITVEPQEAIAEGGADPMRAFLLSQNPQGEDMRFSWD 657

Query: 345 GLKKRV-NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           G+     N ++   +       + M     D          + DE +LS    V  E+ E
Sbjct: 658 GMDSMQRNLNILWNVFRFPLPYMRMDDFSPDETTVEDVELEQIDEWVLSRLQTVESEMGE 717

Query: 404 NMQNQLIHRALAQVISLVSE-VDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           + +++   RA+  ++  V E V R Y  A +     +      +        V+ +   L
Sbjct: 718 HFEDRRQDRAIQGLMDFVVEDVSRFYVQAVRDRVWAEGEDGSKTAAYATLYRVLEETVAL 777

Query: 462 LQAFVPKLANKIFDIL 477
           L  F P +A++I+  L
Sbjct: 778 LAPFTPFIADEIYQYL 793



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  +      Y +   H+G  +   + D   R+ R+ G DV    G D HG  I    
Sbjct: 50  DGEDFFFVDGPPYTSGAAHMGTTWNKTLKDAYIRYLRMQGYDVTDRPGYDMHGLPIETKV 109

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F +Q     ++      +   +DD  +T    + 
Sbjct: 110 EEKLGFENKKDIQEFGEENFIDECKDFAEQQLEGLQEDFKSFGVWMDWDDPYKTLSPEYM 169

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     +++  +KG + +G  S     R E    ++EV  
Sbjct: 170 EAAWWGFEQAHEKGLVEQGKRSISQCPRCETAIANNEVEY 209


>gi|152991206|ref|YP_001356928.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166231623|sp|A6Q512|SYL_NITSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151423067|dbj|BAF70571.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 815

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK+Y+ +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA
Sbjct: 29  SKEKMYVLSMFPYPSGRIHMGHVRNYTIGDAIARYYRKTGANVLHPIGWDAFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +  +N    R   D L +S+  D    T +  +    +     + ++G +Y
Sbjct: 89  IKHKVHPKKWTYENIDYMRKELDALGLSFSHDREFATCDPLYSKWEQSFIIDMWNRGLLY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V +G            V   E E YF +++ Y  +LL   
Sbjct: 149 RKKAAVNWCPHDKTVLANEQVIEG----RCWRCDTEVVQKEIEQYFLKITDYAQELLEDL 204

Query: 181 ES-HPEFILPIERRNEVISFVKSGL 204
           +     +   +            GL
Sbjct: 205 KKLEGNWPNQVIAMQRNWIGRSEGL 229



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 89/258 (34%), Gaps = 34/258 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T        +         + P D ++ G +    H +Y   F         ++
Sbjct: 504 WYFLRYTTPRKYWEEVPFRKEDTDYWMPVDQYIGGIEHAILHLLYARFFTKVLRDLGYVN 563

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GN +DP E++ + G D  R F++      K+  +
Sbjct: 564 LDEPF-KRLLTQGMVLKDGAKMSKSKGNTVDPDEIVAKFGADTARLFILFAAPPAKELEW 622

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
               ++          I     RS +   K          + ++ ++         LQ+ 
Sbjct: 623 SDSAVEGA-----YRFIKRFFERSQN-AYKTKSLPKIDQKSLSKEEKEARKKVYEALQKS 676

Query: 402 RENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            +        +  +A  +  ++ ++            + NPD    +      V+  +  
Sbjct: 677 TDVYTKSFSFNTLIAASMEALNALN-----------GQNNPD----IWTEGYWVLTNI-- 719

Query: 461 LLQAFVPKLANKIFDILF 478
            L+  +P    +I   LF
Sbjct: 720 -LEPIIPHTCWEISHNLF 736


>gi|255348381|ref|ZP_05380388.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502922|ref|ZP_05381312.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506591|ref|ZP_05382230.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525064|emb|CBJ14534.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis Sweden2]
 gi|296438322|gb|ADH20475.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 1036

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 93/287 (32%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  + G  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMGGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDPSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E   G + +  +     V++  ++   F LS   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFE--AGQNYKEVDDPSVVVKFALQDNQGFLLS--W 220

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                   S+    +  E     I   +SG + +        W       P    Y WI 
Sbjct: 221 TTTPWTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPRWF------PDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +     A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELGAFRILPADFIEESEGTGIVHM 321


>gi|319788017|ref|YP_004147492.1| valyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466529|gb|ADV28261.1| valyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 966

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 70/410 (17%), Positives = 133/410 (32%), Gaps = 89/410 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 397 IEPYLTDQWFVKMDALAKRGLGLVESGEVKFVPPNWINT-YRHWMENIQDWCISRQ-LWW 454

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +   YV                            W  +     +T G+ +
Sbjct: 455 GHRIPAWFDAEGKCYVGRSEAEVREKNGLGADVVLSQDSDVLETWFSSQLWPFSTMGWPN 514

Query: 247 NPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
               +     ++ P+ + V G DI+ F    +       +  +P      +      +G+
Sbjct: 515 QQAMAERGFDRYLPSSVLVTGFDIIFFWVARMIMATDHFTGKVPFRDVYITGLIRDAQGQ 574

Query: 302 KISKSLGNVIDPIEVIEEV-------------------------------------GVDA 324
           K+SKS GNV+DP+++I+ +                                     G DA
Sbjct: 575 KMSKSKGNVLDPLDIIDGISLEDLVAKRTRGLMQPKLAEKIEKATRKEFPEGIAAHGADA 634

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGA 382
           LR+ +      G+D  +D         A+      N +  +   +L + DG      P  
Sbjct: 635 LRFTIAALAGHGRDIKFDL------GRAEGYKNFCNKLWNATRFVLMNTDGASFGGAPQP 688

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            T++++ IL+  + V  E R              +         D + +  KP       
Sbjct: 689 VTDAEKWILARLAAVTAEARAQFAAYRFDLLAQALYEFAWNEFCDWFVELAKPALGGDDA 748

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI----LFVADENRCF 486
              AST  +  + V+  L  LL   VP +  +++      L + +     
Sbjct: 749 AAAAST-RHTLLHVLESLLRLLHPLVPFVTEELWRQVAPRLGINEATISL 797



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 24/177 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I           H+GHA++  + D L RFHR+DG DVL+  GTD  G       
Sbjct: 32  EGKPYSILLPPPNVTGTLHMGHAFQHTLMDALVRFHRMDGHDVLWQMGTDHAGIATEMVV 91

Query: 63  QNA----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
                              G   KV+  +        R  R +    D S   F  T + 
Sbjct: 92  SRNLALEGKGETRDSLGREGFIAKVWEWKATSGDTIERQMRRLGASGDWSRSTF--TMDP 149

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +  +     + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 150 QPSEAVVEAFVRWHEEGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|289678201|ref|ZP_06499091.1| valyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 549

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 107/358 (29%), Gaps = 55/358 (15%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S  +D           +   I    +    V  G  +  +  K              ++
Sbjct: 12  FSWMRDIQDWCISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKNKLGPEVALQQDNDVL 71

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA------ 282
             W  +     +T G+ +     +      D+ V G DI+ F         +        
Sbjct: 72  DTWFSSGLWTFSTLGWPEKTKALETFH-STDVLVTGFDIIFFWVARMIMLTMHLVKNEDG 130

Query: 283 --NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---------------------- 318
              +P             +G+K+SKS GNV+DP+++++                      
Sbjct: 131 TPQVPFKTVYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAK 190

Query: 319 ---------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            G DALR+      + G+D  +D   ++     +  N I N   
Sbjct: 191 KIEKQTRQEFADGIASYGTDALRFTFCSLASTGRDIKFDMGRVEG--YRNFCNKIWNAAR 248

Query: 364 RSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +    K  D          + +D  I+S   R   E+   +       A   +   + 
Sbjct: 249 YVLD---KGEDCGQNGETVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIW 305

Query: 423 E--VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +  KP    +T P +R        V V+     L   F+P +  +I+  L
Sbjct: 306 NQYCDWYLELSKPVLWDETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRL 363


>gi|194476636|ref|YP_002048815.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
 gi|171191643|gb|ACB42605.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
          Length = 878

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E  Y  +   YP+ + H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 37  SDGEAFYALSMFPYPSGKLHMGHVRNYVITDVIARAQRMRGKRVLHPMGWDAFGLPAENA 96

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    + + N +  R   D L   I ++  I T  + ++   + L+ +  D G  
Sbjct: 97  AIERGIDPSKWTNTNIQQMRKQLDQLGLSIDWEREISTCNEDYYRWTQWLFLQFYDAGLA 156

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V          A+   V+  +   +F R++ Y + LL  
Sbjct: 157 YQQEATVNWDPIDQTVLANEQVNGDGCSWRSGAK---VEKRKLRQWFLRITNYAEILLRD 213

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 214 LDQLTGWPERVRTMQANWIGRSKG 237



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 23/210 (10%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GN +DP  VIE  G D  R F++ +    KD  +++  ++ +        I 
Sbjct: 629 FEKMSKSKGNGVDPTRVIEHFGADTARMFILFKAPPEKDLEWNESDVEGQFR--FLQRIS 686

Query: 360 NLVSRSV----SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRAL 414
            LV   +     + LK+            + ++ +       +  I E++     ++ A+
Sbjct: 687 RLVEMVLKKGIRLNLKEDLSTTINSKKLNKDEQEVHRATHYAIAAITEDLDGEVQLNTAI 746

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A+++ L    +    +        + P        + +E ++ L ILL  F P L+ +++
Sbjct: 747 AELMKL----NNILSSVSDSI---SEP--------IILEGLKTLIILLAPFAPHLSEELW 791

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             L V D N         L P  ++ +   
Sbjct: 792 SRL-VNDSNSIHNQRWPILDPSALIQENIK 820


>gi|254501366|ref|ZP_05113517.1| leucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222437437|gb|EEE44116.1| leucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 874

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARFKRAKGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  +N    R+   ++ +S D      T +  ++   + L+ K  + G +Y+
Sbjct: 93  QNKVHPKDWTYENIATMREQLKIMGLSLDWSREFATCDVAYYKQQQALFLKFLEAGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S + + LL   E
Sbjct: 153 KNAKVNWDPVDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFKISDFSEDLLEAIE 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +    +       GL+  
Sbjct: 209 TLDRWPDKVRLMQKNWIGRSEGLRVR 234



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/433 (14%), Positives = 130/433 (30%), Gaps = 86/433 (19%)

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
                  + E   N      G   Q Y     PV   ++ G            L    + 
Sbjct: 414 IKVDDGPQAERQVNYRLRDWGISRQRYWGCPIPVIHCDDCGVVPEKDENLPVQLPDDINF 473

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            +   P++R                      + G     +    M  ++D  + Y     
Sbjct: 474 DKPGNPLDRHPT------------WRDTTCPNCGKPAKRETD-TMDTFVD-SSWYFARFT 519

Query: 244 YLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLLSANLP------------LP 287
             D    +  K    + P D ++ G +    H +Y   F  +                  
Sbjct: 520 APDCDQPTDPKAATDWLPVDQYIGGIEHAILHLLYSRFFTRAMQKVGALDLKEPFKGLFT 579

Query: 288 KKVFSHGFILHKG--------------------------------------EKISKSLGN 309
           + + +H      G                                      EK+SKS  N
Sbjct: 580 QGMVTHETYRRGGDGSNGEWVSPAEIKIEEKDGQRVASMLDSGENVSIGSIEKMSKSKKN 639

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            +DP ++I+  G D  R+F++ +    +D  + +DG++       A      V R +  I
Sbjct: 640 TVDPTDIIDTYGADTARWFMLSDSPPERDVIWTEDGVQG------AWRFVQRVWRLIGEI 693

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
            +  +    +  A ++  E +     + L  +  +++    +RA+A++  LV+ + + F+
Sbjct: 694 AEKTEPRNSSVPAMSQKAEDLRRATHKTLAAVSNDLEGLGFNRAVARLYELVNTLSKAFN 753

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQ 487
                 L+    + A        E +  L  ++   +P LA + +  L          + 
Sbjct: 754 E----GLEDQGKEYA------VRETVDYLVQMMAPMMPHLAEECWSELGHDSLISEAAWP 803

Query: 488 SLDQRLKPGFMLH 500
             D  L     + 
Sbjct: 804 EADPSLLAEDTVT 816


>gi|240047826|ref|YP_002961214.1| valyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985398|emb|CAT05411.1| Valyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 823

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 144/373 (38%), Gaps = 49/373 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ + +  +F  +      +L++  S  + +   +   + I      + D ++SR+   W
Sbjct: 347 IEILRKPQWFVSMKKLASDMLAHLSSKDKVLFYPKNFEKNIQKWMKNIHDWTISRQ-LWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G ++                         ++  W  +  +     G+  N +    K++P
Sbjct: 406 GHQMPVWYKDDEIKVQKESPGKNWIQENDVLDTWFSSGISPFVFLGWPQNQEF-MQKYYP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             L V G DI+ F    +Y+ +  +    P  + +        +G K+SKSLGN IDP+E
Sbjct: 465 TSLLVTGWDIIFFWVARMYFSSLNVIKQKPFERVLIHGLIRDIQGRKMSKSLGNGIDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I++ G D LR  L+     G+D  +  + L            G  ++  +  I K    
Sbjct: 525 IIDKYGSDVLRQTLIFNSTPGQDIRFSLEKL----------NPGWALNNKLWNISKYIGS 574

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
           +       ++ D+ I +    + ++I + M+         ++ + +       Y +    
Sbjct: 575 LSYKKTKASQIDDWIENKVHNLNKKINKYMRTYNFSIIGKEIQNFIYNDFSSWYIE---- 630

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
             L K + +      Y    +++++ I+L  F+P L + +F  +F  +     ++   RL
Sbjct: 631 --LIKIDGN-----GYHPRRILKKILIILHPFLPFLTDYLFSNIFQEE---LLENRAPRL 680

Query: 494 KPGFMLHKTFDPI 506
           K      +  + I
Sbjct: 681 KAKKNTVEVDEII 693



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 18/156 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I T       Q H+GHA+   + D + R+ ++   DV      D  G       +
Sbjct: 31  KKPFCIITPPPNVTGQLHLGHAWNTYLQDTIIRYKKIRNFDVFLLPAVDHAGIATQAKVE 90

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
                                   + D+  +        L I+YD      T ++   + 
Sbjct: 91  EKINKEGIKKEDLGLEKFLELCYQWKDEQYQKIIKQWGKLGIAYDYSKERFTLDEGAKEA 150

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               +  +  +  +YKG  +  + ++ +   ++ EV
Sbjct: 151 VSDFFIHLYKQNLLYKGNRAINWDIKFQTAISNVEV 186


>gi|149632053|ref|XP_001513511.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Ornithorhynchus anatinus]
          Length = 901

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 83/201 (41%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 77  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDAIARFQKMRGMQVINPMGWDAFGLPAENA 136

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +   N ++ R+  + + + +  D  I T    ++   + L+ K+ + G  
Sbjct: 137 AIERGLHPENWTQSNIKHMREQLNRIGLCFNWDREITTCLPDYYKWTQYLFIKLYEAGLA 196

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+      +F + + Y   ++  
Sbjct: 197 YQKEALVNWDPVDQTVLANEQVDENGCSWRSGAK---VEQKYLRQWFIKTTTYAKAMVEA 253

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+      +   I   
Sbjct: 254 LAELPEWYGIKGMQAHWIGDC 274



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 106/318 (33%), Gaps = 63/318 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          D + A +W P DL++ GK
Sbjct: 500 VNCSCPRCKRAAKRETDTMDTFVDSAWYYFRYTDPHNTQSPFDKALADYWMPVDLYIGGK 559

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPKKV--------------------------- 290
           +    H  Y   F    N         P  K +                           
Sbjct: 560 EHAVMHLFYARFFSHFCNNQNMVRLREPFHKLLVQGLIKGQTFRLPSGQYLKREEIDLSG 619

Query: 291 --FSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               H     K     EK+SKS  N IDP EV+E+ G+D +R +++   A  KD  +   
Sbjct: 620 SDPVHAKTKEKLEVTWEKMSKSKHNGIDPEEVVEQYGIDTIRLYILFAAAPEKDILW--- 676

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L S +   I     G +P P   +  +++ +       + V+ +
Sbjct: 677 EMKSDALPGVLRWQQRLWSLTTKFIEARASGEVPRPHQLSNKEKAEVKKLLKYKNSVISQ 736

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +  ++  ++  ++ ++ L    +  + A +   L  T  + A          +  L 
Sbjct: 737 VTAHFTEDFSLNSVISHLMGLS---NVLWQASQRIVLHSTEFEDA----------LASLC 783

Query: 460 ILLQAFVPKLANKIFDIL 477
           I+     P +A++++  L
Sbjct: 784 IMTAPMAPHIASELWAGL 801


>gi|302338408|ref|YP_003803614.1| isoleucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635593|gb|ADK81020.1| isoleucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 1040

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 99/269 (36%), Gaps = 6/269 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W ++ +       Y         K +PAD    G D     F+ +   A  L  + 
Sbjct: 517 VLDCWFESGSMPYAQIHYPFENKEWFEKNFPADFICEGLDQTRGWFYTLTILAAALFDSP 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
                V +   +   G+K+SKS  N  DP+EVI++ G DALR FL+       +D  Y  
Sbjct: 577 AFMNVVTNGLVLAEDGKKMSKSERNYSDPVEVIDKFGADALRMFLMNSAVVKAEDLRYSD 636

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           DG+K+ +   +               +  ++            D  ILS    ++ ++  
Sbjct: 637 DGVKEVLKTFIIPFWNAYSFFVTYANIDSFEPKGLKEAPDNPLDRWILSEAEHLVSDVTA 696

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVTVEVIRQLAIL 461
            +    + +A+  ++  V  ++ ++  +      K+  + D+          V+ ++  +
Sbjct: 697 QLDAYDLQKAIEPIVRFVDSLNNWYIRRSRRRFWKSENDSDKLQA-YETLYAVLMKVVRV 755

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLD 490
               +P +   I+  L   +        D
Sbjct: 756 AAPIIPFMTEAIYQNLKCKETAESVHLCD 784



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 51/139 (36%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++        +    PH GH     I D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EGKDEFVFYDGPPFATGLPHFGHFVPGTIKDIIPRYQTMKGKKVLRRFGWDCHGLPVEYE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                     + +  V + +  +R +   +   + +D   +T +  +
Sbjct: 96  MEKELGISGKSEIEAFGVAKFNESCRSIVLRYTSEWRQIVTRMGRWVDFDHDYKTMDPDY 155

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   +  ++  KG +Y+
Sbjct: 156 MESIWWVLSQLWKKGYLYE 174


>gi|237653453|ref|YP_002889767.1| valyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624700|gb|ACR01390.1| valyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 994

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 62/406 (15%), Positives = 126/406 (31%), Gaps = 61/406 (15%)

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y+ W +   +   +    +      +Y+ +        EE       A     +   +
Sbjct: 416 NTYNQWLNNIQDWCISRQLWWGHRIPAWYDEEGRIYVATCEEEAIRAWKADLQLGIDALD 475

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL-- 239
           +  +      +  E    +   L  L                   ++  W  +       
Sbjct: 476 AEVQTRQREGQTAEQYPEIAERLALLHARHDAGR-----LRQEDDVLDTWYSSALWPFST 530

Query: 240 --TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
              T  + +  + +   + P+ + V G DI+ F    +      ++  +P          
Sbjct: 531 LDWTAEWPEKSNDALDLYLPSTVLVTGFDIIFFWVARMVMMTKHITGRIPFKHVYVHGLI 590

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE------------------------------------ 319
              +G+K+SKS GNV+DPI++I+                                     
Sbjct: 591 RDAEGQKMSKSKGNVLDPIDLIDGIALDELIKKRTFGLMNPKQAQSIEKKTRKEFPEGIP 650

Query: 320 -VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G DALR+      + G+D  +D    +     +  N + N  +R V M  +  D  I 
Sbjct: 651 AFGTDALRFTFASLASPGRDIKFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGQDCGIG 707

Query: 379 TPGA-------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
              A       F+ +D  I+S   R   E+ E+            V   V +   D Y +
Sbjct: 708 ETVACSTEVLDFSFADRWIVSRLQRTEAEVAEHFAAYRFDLVARAVYEFVWDEYCDWYLE 767

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             K  +++   P +        + V+  +  L    +P +  +++ 
Sbjct: 768 LAKV-QIQSGTPAQQRATRRTLLRVLETVLRLAHPLIPFITEELWQ 812



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 22/155 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--- 63
             I           H+GH +   I D L R+HR+ G + L+  GTD  G       +   
Sbjct: 38  FCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQL 97

Query: 64  ----------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                                 K +     +R  R +    D   + F  T ++    T 
Sbjct: 98  DAQGVSRHDLGRERFLEKVWEWKEYSGGTITRQMRRLGTSPDWKRERF--TMDEGLSRTV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+G     +  +     +D EV
Sbjct: 156 TETFVRLYNEGLIYRGKRLVNWDPKLGTAVSDLEV 190


>gi|296282118|ref|ZP_06860116.1| leucyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 841

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R K Y+     YP+ + HIGH     + DVLAR+  + G +VL   G D  G     A
Sbjct: 31  SDRPKSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKAMRGHEVLHPMGWDAFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N  + +     L  + D    + T E  ++   + L+  + + G +
Sbjct: 91  AMEKGVHPGKWTRENIESMKAQLKRLGFALDWSRELATCEPDYYGHEQALFIDLFEAGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +G            V+  +   +F +++ + ++LL  
Sbjct: 151 YRKESEVNWDPVDQTVLANEQVIEG----RGWRSGAEVEKRKLAQWFLKITDFAEELLDG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ES  ++   +    E       GL+
Sbjct: 207 LESLDKWPDKVRLMQENWIGKSRGLQ 232



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 36/194 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP  +I + G DA+R+F++ +    +D  + + G++         G    
Sbjct: 617 KMSKSKRNVVDPDTIIAQYGADAVRWFMLSDSPPERDLPWSESGIE---------GCARF 667

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   ++ +        P A  E D  +    +R + ++ E ++    ++A+A++  LV
Sbjct: 668 VQRVWRLVGE------HDPAAQGE-DADLARKTARSVHDVAETIEALHFNKAVAKLYELV 720

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                         L+K  P    T        I+ L  L+   +P LA + +  +    
Sbjct: 721 GA------------LEKAEPSATRT------GSIQTLFQLVAPMMPHLAEEAWHSIGRQG 762

Query: 482 --ENRCFQSLDQRL 493
                 +  +D+ L
Sbjct: 763 LIAKAPWPEVDESL 776


>gi|283781023|ref|YP_003371778.1| valyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439476|gb|ADB17918.1| valyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 1043

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 103/308 (33%), Gaps = 59/308 (19%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+ +      A F+P  + +  +DI+      +        
Sbjct: 545 EEDVLDTWFSSALWPHSTLGWPEKTS-DLAFFYPTSVLITSRDIITLWVARMVLTGLNNM 603

Query: 282 ANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             +P  ++VF H  IL   GE +SKS GN +DP +++ + G DALR+ L       +D  
Sbjct: 604 GEVPF-REVFIHPKILDGYGETMSKSKGNGVDPNDIVAKFGADALRFGLTCLTTETQDVR 662

Query: 341 ----------------------------------YDKDGLKK------------RVNADL 354
                                             +     +K                ++
Sbjct: 663 MPVQFECPHCEALVDQTKKNRELPRVACTKCSKEFSTQWARKEEDQALPRAAVVSERFEV 722

Query: 355 ANGIGNLVSRSVSM---ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           A    N +  +       LK+Y      P      D  +LS  + V +E+ E +Q     
Sbjct: 723 ARNFSNKLWNAARFALINLKEYTPGSVLPEELAVEDRWLLSRLTTVTREVTEALQTYRYA 782

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   +     +     Y +  K    +  +P+   T   V    +  +  LL   +P L
Sbjct: 783 DAAKSIYDFAWDEFCSLYVEITK---ARLQDPEARPTAQRVLAHTLDTMLRLLHPMMPFL 839

Query: 470 ANKIFDIL 477
             +I+  L
Sbjct: 840 TEEIWQQL 847



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 47/160 (29%), Gaps = 23/160 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            +E   I           H+GHA    + D+  R  R+ G   L+  GTD  G       
Sbjct: 39  GKEPFAIVIPPPNVTGALHLGHALNNTLQDIQIRMKRMQGYVTLWVPGTDHAGIATQAVV 98

Query: 60  -----------------KAAQNAGVTTK-VFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K  +  +     + M    D     F  T ++ 
Sbjct: 99  ERRLREEEGKTRHDLGREKLVERIWNWKAEYEKRILGQLKQMGCSCDWQRTRF--TLDEV 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                R  +  +  K  IY+G     +    +   +DDEV
Sbjct: 157 CATAVRRTFFDLFQKELIYRGKKLVNWDTFLQTAVSDDEV 196


>gi|268679959|ref|YP_003304390.1| valyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617990|gb|ACZ12355.1| valyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 876

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 135/385 (35%), Gaps = 57/385 (14%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E + +  E Y+   G  Y    N V+    + + F      +  ++    H     P   
Sbjct: 332 EGFVDKVEDYENQVGHCYR-CKNVVEPYISKQW-FVKKEIAEGAIAKVNEHLAQFYPSHW 389

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKI------------------------------PD 222
            N   +     L+D  +SR+   WG +I                                
Sbjct: 390 LN-SYNAWMKELRDWCISRQ-LWWGHQIPVFYCDACGHEWASENEVEHTCPKCQSKQIHQ 447

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--A 272
           DP  ++  W  +     +T G+ +          +    +F+P  L + G DIL F    
Sbjct: 448 DPD-VLDTWFSSGLWPFSTLGWGNGEALKNEKWFENDLKEFYPNTLLITGFDILFFWVAR 506

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +        LP              G+K+SKS GNVIDP++ I E   D LR+ L   
Sbjct: 507 MMFSGEHTFKELPFKDIYLHALVKDEHGQKMSKSKGNVIDPLDSIAEYSADTLRFTLAIL 566

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G+D     + L++  N    N + N  SR + M    ++ +       T     + S
Sbjct: 567 AVQGRDIKLSSEKLEQIRN--FTNKLYN-ASRFLLMNASSFEDLE-KLEIKTALGAYMKS 622

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             +   +E+RE+  +   + A   +   +            W ++ +  D+ + +     
Sbjct: 623 RLAVAQEEVREHFSSYRFNDAATTLYRFLWG------EFCDWGIELSKADKPAILE--LG 674

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            + ++   LL  F+P ++  ++  L
Sbjct: 675 SIFKEAMKLLHPFMPFISEFLYQEL 699



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 64/173 (36%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I           HIGHA    + D++ RF R+DG   L+  GTD  G      
Sbjct: 37  EEGKNFAIMMPPPNVTGSLHIGHALTFTLQDIITRFKRMDGFKTLWQPGTDHAGIATQNV 96

Query: 62  AQNAGVT--------------TKVFVD------QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +   ++               KV+        Q     R +      S + F  T ++ 
Sbjct: 97  VEKQLLSQGIKKEELGREKFLEKVWEWKAYSGGQIVHQMRKLGVSPAWSRERF--TMDEG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             +  R  + K  D+G I +G Y   +   D A  + +  Y+   G+ Y+ ++
Sbjct: 155 LKNAVRKSFVKWYDEGLIVRGNYMVNWCTHDGALSDIEVEYEQNKGKLYHLKY 207


>gi|194747537|ref|XP_001956208.1| GF25092 [Drosophila ananassae]
 gi|190623490|gb|EDV39014.1| GF25092 [Drosophila ananassae]
          Length = 869

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 83/230 (36%), Gaps = 11/230 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA
Sbjct: 60  TKNKYYVLSMFPYPSGNLHMGHVRVYTIADAVARFQRMCGKNVFQPMGWDSFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + +QN    R     L  S+D    + T   +++   + L+  +   G  Y
Sbjct: 120 NQRGVEPASWTEQNIDQMRKQLKRLGCSFDWNHELSTCSPQYYRWTQHLFLMLHRHGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    D++V          A+   V+      +F R SAY  +LL   
Sbjct: 180 QNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLRQWFIRTSAYAKQLLDGL 236

Query: 181 ------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 +      L      E      + L   S   + +    +   DP
Sbjct: 237 EDPTLRDWRDIINLQRHWIGECDGHAFTLLTSASGLLRVWTAHPEHLKDP 286



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 96/323 (29%), Gaps = 80/323 (24%)

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKD 266
            +    G K        M  ++D+   YL      ++     ++    F P DL++ GK+
Sbjct: 445 CECPKCGQKDARRETDTMDTFVDSSWYYLRYLDAQNSERIFDSELANRFMPVDLYIGGKE 504

Query: 267 ILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI---------------------- 296
               H  Y        +         P  + +     +                      
Sbjct: 505 HAVLHLYYARFMNHFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYVPEAEVEVVN 564

Query: 297 ---------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                          +   EK+SKS  N ++P ++ +E G D  R  ++ ++A      +
Sbjct: 565 AKKNQAVLKETKEQVVMGWEKMSKSKLNGVEPSDMFDEYGTDTTRLIILADVAPTSHRNW 624

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSR 396
                   +N          +  ++       +   P         F   D  +    + 
Sbjct: 625 SSATFPGILN------WQKRLWLTLEDFQAAREDTSPAQVDVNSEEFLADDAKLFDARNF 678

Query: 397 VLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++    N +    +  A++++  L +             L++T       +L    +  
Sbjct: 679 YVKGATFNYRHAHQLSVAISKMQGLTN------------SLRRTP----KHILRHGKQFE 722

Query: 456 RQLA---ILLQAFVPKLANKIFD 475
           R LA   I+L    P  A++++ 
Sbjct: 723 RALAAQIIMLAPMAPHFASELWS 745


>gi|315608065|ref|ZP_07883058.1| valine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250534|gb|EFU30530.1| valine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 894

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 123/368 (33%), Gaps = 59/368 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F R+  + D  L    +      P + +N         +KD  +SR+   
Sbjct: 365 PIEPKLSTQWFLRMQHFADLALPPVMNDDIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 422

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                      +     +  W  +   
Sbjct: 423 WGHRIPAYYFTTADGKKDFVVAENAATALAKAQEKNSSLKAEDLEQESDCLDTWFSSWLW 482

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    + +PD    K++ P    V G DI+ F    +    +      P     F+  
Sbjct: 483 PISVFDGIRHPDNGDIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYKGKSPFKHVYFTGI 542

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+   ++  N   
Sbjct: 543 VRDKLGRKMSKSLGNSPDPLMLIDKYGADGVRMGMMLSAPAGNDILFDETLCEQGRN--- 599

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  ++          P A   +     +       E+ E  ++  I  AL
Sbjct: 600 ---FNNKIWNAFRLVKGWEVADQEQPTANKIAIAWFEAKLKEANDELNELFKSYRISEAL 656

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLA 470
             V  L      ++D    W L+   P     +   + E        L  +L  F+P + 
Sbjct: 657 MAVYRL------FWDEFSGWYLEMVKPAYEQPIDRKSYEATLAFFDALLKMLHPFMPFIT 710

Query: 471 NKIFDILF 478
            +++  ++
Sbjct: 711 EELWQHIY 718



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T ++   +
Sbjct: 92  VNKLAEQGVKKTDLTREQFLKHAWDWTHEHGGIILKQLRKLGASCDWDRTAFTMDETRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYEKGLIYRGVRMVNWDPQAQTALSDEEVIYKDEH 194


>gi|296434604|gb|ADH16782.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 1036

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|260911702|ref|ZP_05918280.1| isoleucyl-tRNA synthetase [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634178|gb|EEX52290.1| isoleucyl-tRNA synthetase [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 614

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 106/281 (37%), Gaps = 12/281 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y         K   +PAD    G D     F  ++
Sbjct: 75  KPMKREIDLIDVWFDSGAMPYAQVHYPFENAELIDKRIAFPADFINEGVDQTRGWFFTLH 134

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +  KG K+SK +GNV++P E++E+ G D +R +++    
Sbjct: 135 AIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVGNVVNPFEMMEKYGADPVRMYMLTNSE 194

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D + + +                ++   +  +D            E D  ILS
Sbjct: 195 PWDNLKFDAESVDEIRRKLFGTLYNTYSFFALYANVDGFDYSQDDVPLKERPEIDRWILS 254

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
               +++ +   M +    RA   + + V++   + Y   + ++ W   K       +  
Sbjct: 255 ELHSLVKGVEHEMDDYDPTRAGRLIDTFVNDDLSNWYVRLNRKRFW--GKEMSQDKLSAY 312

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 +  +A LL  F P  A++++  L  A +    QS+
Sbjct: 313 QTLYTCLETVAKLLAPFAPFYADQLYLDLTRATKREQLQSV 353


>gi|237804368|ref|YP_002888522.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272668|emb|CAX09571.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis B/TZ1A828/OT]
          Length = 1036

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 90/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVIKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +   AD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILSADFIEESEGTGIVHM 321


>gi|299768945|ref|YP_003730971.1| valyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298699033|gb|ADI89598.1| valyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 965

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 140/408 (34%), Gaps = 95/408 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 438 GHRIPAWYDANGNIYVGRNEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------V 290
           +     A  +     P D+ V G DI+ F    W A ++   L   K            V
Sbjct: 498 DAQKDAANDFLKTFHPTDVLVTGFDIIFF----WVARMIMMTLHFMKNEDGSSQVPFKTV 553

Query: 291 FSHGFILH-KGEKISKSLGNVIDPIEVIEE------------------------------ 319
           + HG +   +G+K+SKS GNV+DP+++I+                               
Sbjct: 554 YVHGLVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKE 613

Query: 320 -------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
                   G DA+R+        G+D  +D   ++     +  N I N     +  +   
Sbjct: 614 FPEGINAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQ 671

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
             G    P  +   ++ I+S   +    + +      +  A   +   +     D Y + 
Sbjct: 672 TVGQEARPDLWELPEQWIMSRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVEL 731

Query: 431 QKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KP     + + +R + V  V + V+     L    +P L  +I+  L
Sbjct: 732 TKPVLNDAEVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 779



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 65  A--------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGVTRHDLGRDKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|312115573|ref|YP_004013169.1| leucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220702|gb|ADP72070.1| leucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 870

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     A
Sbjct: 31  RSRPKYYVLEMFPYPSGRIHVGHVRNYTMGDVVARYKRARGFNVLHPFGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+  + +  +N    R     + +S D      T +  ++   + ++    +KG +
Sbjct: 91  AIQKGINPREWTYENIEAMRTQLKRIGLSLDWTREFATCDPEYYHQQQRIFLAFREKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  E   +FF+++ Y D LL  
Sbjct: 151 YRKKSKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQKELAQWFFKITHYADDLLDG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            ++  ++   +            GL
Sbjct: 207 LDTLDKWPDKVRLMQRNWIGKSQGL 231



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 56/400 (14%), Positives = 118/400 (29%), Gaps = 72/400 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L    S  +   P++        VK 
Sbjct: 429 WGVSRQRYWGCPIPVIHCDKCGVVPVPDEDLPVRLPDDVSFDKPGNPLDHHPTW-KHVKC 487

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                  +R+T  +         ++   W  A          +++         P D ++
Sbjct: 488 PTCGGKATRETDTF-------DTFVDSSWYFARFTAPHAAEPVESAQADYWL--PVDQYI 538

Query: 263 IGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKG--------------- 300
            G +    H +Y                      +F+ G +LH+                
Sbjct: 539 GGVEHAILHLLYARFFTRAMKDCGYLGLAEPFNALFTQGMVLHETYFDEKQNWLAPDEVK 598

Query: 301 -------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                    EK+SKS  N IDP    +  G D  R+F++ +   
Sbjct: 599 IETENGARKAFRIDGGQEPISIGSIEKMSKSKKNTIDPDVFTQHYGADVARWFVLSDSPP 658

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  + ++G++          +  L++ +   +          P  F+   + +     
Sbjct: 659 ERDVVWTEEGVQGAWR--FTQRVWRLLNEAEPRLAA---ADAKVPATFSTPAQGLRRAAH 713

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + L  + E ++    +RA+A V    + +      +        +     +  +   E  
Sbjct: 714 KGLAAVAEEIEGLRFNRAIAAVYEFANALQAALQDK--------SAAGDESFGFALREAS 765

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
                ++   +P LA + F +L       N  +  +++ L
Sbjct: 766 LFFVHMINPIMPHLAEEGFSLLGYNTLLANEPWPEVERSL 805


>gi|255310820|ref|ZP_05353390.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317120|ref|ZP_05358366.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 1036

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDTYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|255321491|ref|ZP_05362649.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255301347|gb|EET80606.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 823

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 35  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKHGYNVLHPIGFDSFGMPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K++  +N    R   + L +S+       T++  +    +  + K+ +KG +Y+ 
Sbjct: 95  HKIHPKIWTYENIDYMRGELETLGLSFSKKREFATSDPLYTKFEQEFFIKMYEKGLVYRK 154

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          N V   E  GY+ +++ Y  +LL   + 
Sbjct: 155 SAVVNWCEYDQTVLANEQVEDG----CCWRCGNAVIQRELPGYYLKITDYAQELLDDLKC 210

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 211 LEGKWPSQVLTMQENWIGKSFGL 233



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 118/360 (32%), Gaps = 51/360 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V   +   +      Y    +         ++P +  N  ++           +      
Sbjct: 424 VVNFKIRDWGISRQRYWGAPIPMVHCKCCGVVPEKIENLPVTLPDDVQITGEGNPLDKHE 483

Query: 217 GIKIPDDPQ---------YIMYVWIDALTNYLTTTGYLDNPDGSKA-------KFWPADL 260
             K    P+           M  + +  + Y       +     +A        +   D 
Sbjct: 484 SWKHVKCPKCGGEAVRETDTMDTFFE-SSWYFARYASDEKTWQERAFDAKSVNYWMNVDQ 542

Query: 261 HVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++ G +    H +Y   F         L  + P  +++ + G +L  G+K+SKS GNV+D
Sbjct: 543 YIGGIEHAILHLLYARFFQKALRDLGYLRDDEPF-ERLLTQGMVLKDGKKMSKSKGNVVD 601

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P ++I + G D  R F++      K+  ++   ++       A    N +    S + + 
Sbjct: 602 PDDIIHKYGADTARLFILFAAPPQKELEWNDSAVEG------AFRFLNRLYERSSGVKRC 655

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQ 431
                      ++  +         L++  +   +N   +  +A  +  ++ V+      
Sbjct: 656 MQIPQIAHANLSKEKKYARMKVYEALKKSNDVYEENFTFNTLIAACMEALNAVN------ 709

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                       A     VT E    +  LL+  VP +AN++ + LF        + LD+
Sbjct: 710 ------------AQDNQDVTTEAFFIILNLLEPIVPHVANELSERLFSRANFTKIEILDE 757


>gi|237802453|ref|YP_002887647.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273687|emb|CAX10465.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis B/Jali20/OT]
          Length = 1036

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVIKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|163745430|ref|ZP_02152790.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161382248|gb|EDQ06657.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 848

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    +     L +S D    I T    ++   + L+    +KG +Y
Sbjct: 90  MAIGGHPADWTYANIAEMKKQMKPLGLSIDWSREIATCHPGYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G           PV+  E   +FF++S + ++LLS  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVENG----CGWRSGAPVERRELTQWFFKISDHSEELLSAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +S   +   ++           GL+
Sbjct: 206 DSLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 119/382 (31%), Gaps = 88/382 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L Y  +      P++R     +    
Sbjct: 427 WGLSRQRYWGCPIPVVHCDDCGVVPEKKENLPIELPYDVTFDTPGNPLDRHPTWRNC--- 483

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PAD 259
                         G     +    M  ++D+   Y            D   A +W   D
Sbjct: 484 ---------ACPACGKDALRETD-TMDTFVDSSWYYARFTAPRADTPTDLEDAAYWMNVD 533

Query: 260 LHVIGKDILRFHAIYWP----AFLLSANLP-----LPKKVFSHGFILHK----------- 299
            ++ G +    H +Y      A  ++ +LP         +F+ G + H+           
Sbjct: 534 QYIGGIEHAILHLLYARFFARAMQITGHLPEGAAEPFDALFTQGMVTHEIYQTRDANGRP 593

Query: 300 -----------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                    K+SKS  NV+DP+ +I   G D  R+F++ +    
Sbjct: 594 VYHLPEDVTDGKLADGSEVEIIPSAKMSKSKKNVVDPLHIISNYGADTARWFVLSDSPPE 653

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G +        + + N+  R   M             A    D+ +L    +
Sbjct: 654 RDVEWTASGAEASYKH--LSRVWNICDRVGEM----------DRDAAGTGDDELLRAMHK 701

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + ++   +++   + A+A++ +  +             L+K+    A+       E I 
Sbjct: 702 TIHDVTMGIESFGFNAAIAKLYAFTA------------TLQKSKAGYAAQ-----REAIM 744

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            LA L+    P L+  I+  L 
Sbjct: 745 TLAQLMSPMTPHLSEDIWAHLG 766


>gi|74193383|dbj|BAE20651.1| unnamed protein product [Mus musculus]
          Length = 626

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     AA 
Sbjct: 80  KPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAI 139

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  Y+
Sbjct: 140 ERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 199

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    +          V+      +F + +AY   +     
Sbjct: 200 KEALVNWDPVDQTVLANEQV---NEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALA 256

Query: 182 SHPEFILPIERRNEVISFV 200
             PE+      +   I   
Sbjct: 257 DLPEWYGIKGMQAHWIGDC 275


>gi|57505384|ref|ZP_00371312.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016209|gb|EAL52995.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 870

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 87/499 (17%), Positives = 158/499 (31%), Gaps = 76/499 (15%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           + G  + K      +       ++   F  + D   I  +                    
Sbjct: 262 DFGTGVVKVTPAHDMNDYEVGLRHHLEFLSVFDEKGILNEH------------------C 303

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +   G              +   + +          Y    +N V+    + + F     
Sbjct: 304 LEFMGLERLEAREKIVQKLENLGFIEKIEEHYNQVGYCYRCNNIVEPYISKQW-FVKKEI 362

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------------ 220
             K +     +     P    N   +     L+D  +SR+   WG +I            
Sbjct: 363 AQKSIEKVALNKTQFYPSHWVN-SFNAWMRDLRDWCISRQ-LWWGHQIPVYYCECGCEWA 420

Query: 221 ----------------PDDPQYIMYVWIDALTNYLTTTGY--------LDNPDGSKAKFW 256
                             DP  ++  W  +    ++T G+            +    +F+
Sbjct: 421 SEDTPKSCPKCGSTNFHQDPD-VLDTWFSSGLWAMSTLGWGNKDWGKDQFWFEKDLREFY 479

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPI 314
           P  L + G DIL F          +A   LP K ++ H  +  + G K+SKSLGNVIDP 
Sbjct: 480 PNSLLITGFDILFFWVARMMFQSTNALEELPFKHIYLHALVKDEQGRKMSKSLGNVIDPN 539

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E I+    D LR+ L      G+D    +D L +  N    N I N  +  +    K  D
Sbjct: 540 ESIKTYSADILRFTLALLAVQGRDIKLSEDKLLQVRN--FTNKIYNATNYLLLNENKFED 597

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
               T    +E  + I +     L+++REN++N   + A   +         ++D    W
Sbjct: 598 LENITIQ--SELAKFIDAKFQECLKQVRENLENYRFNDAANYLYRF------FWDDFCDW 649

Query: 435 --ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
             EL K        +  +  E ++     L  F+P ++   +  L  ++       +   
Sbjct: 650 GIELSKAQKSSVKELGSIFKEALKA----LHPFMPFMSEYAYHKLSGSELENSASIMISA 705

Query: 493 LKPGFMLHKTFDPIFPRFL 511
                   +  + IF   +
Sbjct: 706 YPNLGNKDEKIERIFSLLI 724



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE +   I           HIGHA    + D++ R+ R+DG   L+  G D  G      
Sbjct: 30  KEGKNFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMDGYKTLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     +    L I  ++     T +    
Sbjct: 90  VEKQLLAQGITKEELGREKFIKKVWEWKEQSGGKILEQMRTLGITPAWSRLRFTMDDGLA 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + K+ D+  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVKLYDEKLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|258648502|ref|ZP_05735971.1| valine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851267|gb|EEX71136.1| valine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 893

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 132/398 (33%), Gaps = 61/398 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L    +      P + +N       S +KD  +SR+   
Sbjct: 366 PIEPKLSMQWFLKMQHFADLALPPVMNDEIKFYPTKYKNI-YRHWLSNIKDWCISRQ-LW 423

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 424 WGHRIPAYFLPNGDCVVAETIEEAVEEARKLSGDATIEAKDLKQDEDALDTWFSSWLWPI 483

Query: 240 T-TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +   G  D  +     ++P    V G DI+ F    +    +  +  +P     F+    
Sbjct: 484 SLFNGISDPNNEEFRYYYPTADLVTGPDIIFFWVARMIMAGYEYTGKMPFKHVYFTGIVR 543

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+ +I+  G D +R  L+     G D  YD    ++    +  N
Sbjct: 544 DKLGRKMSKSLGNSPDPLALIDSFGADGVRMGLMLAAPAGNDILYDDSLCEQ--GRNFCN 601

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N      S+ + D         A     +   +   +   EI +      +  AL +
Sbjct: 602 KIWNCFRLIDSLEVSDGAQPQTARRAL----DWFGAQLRKSAAEIADLFTKYRLSEALME 657

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANK 472
           +  L++      D    W L+ T P     +   T+         L  LL  F+P +  +
Sbjct: 658 IYRLIT------DEFSGWLLEMTKPAYGEPIDRRTINEVKAYFNDLLHLLHPFMPFITEE 711

Query: 473 IFDILFVADENRCF----QSLDQRLKPGFMLHKTFDPI 506
           ++  L             Q++ Q       +  TF+ I
Sbjct: 712 LWQHLAERKSGESIMIDPQNIAQPQAEDAQILATFEQI 749



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNETIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        + D++          +  S D      T ++    
Sbjct: 92  VARLAERGIKKTDLTREEFLKHAWEWTDEHGGIILQQLRRVGASCDWERTAFTMDEERSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +   ++  +  KG IY+G     +  +     +D+EV    +
Sbjct: 152 SVIHVFVDLYKKGLIYRGVRMVNWDPKALTALSDEEVIYKEE 193


>gi|163869196|ref|YP_001610448.1| leucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189082982|sp|A9IYY8|SYL_BART1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161018895|emb|CAK02453.1| Leucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 886

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 6/208 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 40  GREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAKGFNVLHPMGWDAFGMPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             + V  K +  +N    R     L +S D      T +  ++   ++L+     KG + 
Sbjct: 100 LQSKVHPKTWTYENIAVMRGQLKQLGLSLDWAREFATCDVDYYHRQQMLFLDFYQKGLVA 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S + + LL+  
Sbjct: 160 RKVAKVNWDPVDHTVLANEQVVDG----RGWRSGALVEQRELTQWFFKISDFSEDLLAGL 215

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS 208
           E   ++   +    +       GL    
Sbjct: 216 EELDQWPEKVRTMQKNWIGKSQGLLIRW 243



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 104/323 (32%), Gaps = 67/323 (20%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLH 261
            ++         G     +    M  ++D+   Y   T         K   A++ P   +
Sbjct: 500 HEMWQDVACPICGQPAKRETD-TMDTFVDSSWYYARFTAPFAPEPVEKQATAEWLPVQQY 558

Query: 262 VIGKDILRFHAIYWPAFLLSANLP------------LPKKVFSHGFILHKG--------- 300
           + G +    H +Y   F+ +  L               + +  H                
Sbjct: 559 IGGIEHAILHLLYARFFMRAMKLVGHVSVDEPFKGLFTQGMVVHETYRDDQGWVSPAEIS 618

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS  NV+DP ++I   G D +R+F++ +    
Sbjct: 619 IVEKDGKRCAYKLTDQSEVTIGLIEKMSKSKKNVVDPDDIIASYGADTVRWFVLSDSPPE 678

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  + + G++          +   V+ S + +LKD        GA  E  ++      R
Sbjct: 679 RDVIWTESGVEGAHR--FVQRVWRHVALSAA-VLKDVAPRAGHQGAALELSKA----AHR 731

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVI 455
           +L  + ++++    +RA+A++           +   P   K  +  D          + +
Sbjct: 732 MLHAVEDDLEKFAFNRAIARLYEF-------LNIMAPLLNKVADVEDEMKAA---LRQAM 781

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
                ++   +P LA +    L 
Sbjct: 782 DFFLAMIAPIMPHLAEECHAALG 804


>gi|224534130|ref|ZP_03674710.1| isoleucine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514555|gb|EEF84869.1| isoleucine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 1042

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 63/413 (15%), Positives = 135/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+  Y   Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L+ LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELEKLSGQKIEDLHKDKVDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNESNFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP+EVI   G DALR +L+    
Sbjct: 567 ILGTSLFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K               D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFQPPKNLNLVKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNNEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 65/466 (13%), Positives = 135/466 (28%), Gaps = 71/466 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           MK+RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MKQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIIFRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G   +  +     
Sbjct: 150 TMDISFMESVWWVFKSLYNKGLIYESYYVLPYSPKLATPLSNFEVNLGEYKEVNDPSLTI 209

Query: 157 VQWMEEEGYFF---RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              ++++  +      + +            E         +    +  G K L+     
Sbjct: 210 KFKIKDKNEYLLAWTTTPWTLPSNLGIAVGQEIEYSKIFDKKKEEILILGSKKLNSYYDD 269

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            +    I       +         Y     Y        A       +V  +D       
Sbjct: 270 ENSYTIIEKFKGSKL-----KGIEYEPIFNYFLEQKNKGAFKVHTADYVTTEDGTG---- 320

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV--IDPIEVIEEVGVDALRYFLVR 331
                           +        +  KI K   NV  IDP++   +       +  + 
Sbjct: 321 ----------------IVHIAPFGEEDYKILKKHTNVDIIDPLDAECKFTNRVKDFKGL- 363

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                KD   DK  ++     +      N + R       +Y  +     ++  + E I 
Sbjct: 364 ---FVKDA--DKKIIENLKLRNFLFKRENYLHRYPFCYRTNYPIIYRPISSWFVNVEKIK 418

Query: 392 SVCSRVLQEIR---ENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           +    V ++I     +++     + L       +  D      + W
Sbjct: 419 TKLLEVNEKINWMPAHLKKGRFGKWLE------NAKDWAISRNRFW 458


>gi|330963477|gb|EGH63737.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 868

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVILPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGASAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASGSLDIAALTDEQKA 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +     + +++  +++  NQ  + A+AQV++L++ +      + P   + T  DRA    
Sbjct: 709 VRRSIHQAIKQASQDIGHNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|330873573|gb|EGH07722.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 868

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   S  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGSVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 115/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVILPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASGSLDIAALTDEQKA 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           +     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA    
Sbjct: 709 VRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|312963226|ref|ZP_07777710.1| Leucyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282492|gb|EFQ61089.1| Leucyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 868

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPMGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  MKNNVAPAKWTYENIAYMKTQLRSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  +   Y+F+++AY D+LLS  
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGAVIEKRQIPMYYFKITAYADELLSSL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DDLPGWPEQVKTMQRNWIGKSKGM 230



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 79/185 (42%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK++KS  N +DP  +I++ G D  R F++          +   G++             
Sbjct: 626 EKMAKSKNNGVDPQSMIDQFGADTCRLFMMFASPPDMSAEWSDSGVEGSH---------R 676

Query: 361 LVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +        +P      + ++  ++I       +++  +++ Q+   + A+AQ
Sbjct: 677 FLKRVWRLAHAHVSQGLPAKLDVASLSDEQKAIRRSTHLAIKQASQDVGQHHKFNTAIAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +      + P   + T  DRA     +  E +  + +LL    P ++++++  
Sbjct: 737 VMTLMNVL-----EKAP---QATGQDRA-----LLQEGLETVTLLLAPITPHISHELWSR 783

Query: 477 LFVAD 481
           L  +D
Sbjct: 784 LGHSD 788


>gi|167753124|ref|ZP_02425251.1| hypothetical protein ALIPUT_01395 [Alistipes putredinis DSM 17216]
 gi|167659438|gb|EDS03568.1| hypothetical protein ALIPUT_01395 [Alistipes putredinis DSM 17216]
          Length = 1132

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 110/271 (40%), Gaps = 12/271 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADLHVIGKDIL--RFHAI 273
           G  +  +P  ++ VW D+         Y     G   K  +PAD    G D     F  +
Sbjct: 591 GEPMRREPD-LIDVWFDSGAMPYAQLHYPFEHGGDYFKSVYPADFIAEGVDQTRGWFFTL 649

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  A +L  ++     + +   +   G K+SK LGN +DP E++   G DA R++++   
Sbjct: 650 HAIATMLFDSVAFKNIISNGLVLDKNGNKMSKRLGNAVDPFEILSTYGADATRWYMISNS 709

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESIL 391
               +  +D+DG+ +                ++   +  + G  P        E D  I+
Sbjct: 710 QPWDNLKFDRDGVDEVRRKFFGTLYNTYSFFALYANVDGFTGQEPEVPMSERPEIDRWII 769

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTV 447
           S+ + +++ + E+++N     A   +   V  +  + Y   + ++ W    T  D+ +  
Sbjct: 770 SLLNTLVRNVTESLENYDPTPAARMIQEFVCENLSNWYVRLNRKRFWGGGLT-RDKLAA- 827

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  +  +++L   F P ++++IF  L 
Sbjct: 828 YQTLYTCLETVSMLSAPFAPFISDRIFRDLN 858



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 51/166 (30%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+    G  V    G D HG  +   
Sbjct: 36  EGHPTFVFYEGPPSANGTPGIHHVMARTIKDIFCRYKTQQGYLVHRKAGWDTHGLPVELG 95

Query: 62  AQNAGVTTK---------------------VFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     TK                      +        R M   +++  DD   T + 
Sbjct: 96  VEKKLGITKEDIGRTISIEEYNRACREAVMEYTGLWEELTRKMGYWVNM--DDPYITYDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ DKG +YKG     YS       +  E+ +   
Sbjct: 154 KYIETLWWLLKQLFDKGLLYKGYTIQPYSPAAGTGLSTHELNQPGC 199


>gi|220908415|ref|YP_002483726.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782492|sp|B8HM05|SYL_CYAP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219865026|gb|ACL45365.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 858

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  RSKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARVRRMQGYRVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N    R     L +SYD    + T    ++   + ++ +    G  
Sbjct: 90  AIKRGIHPAKWTADNITQMRSELKRLGLSYDWNCELATCSPDYYRWTQWIFLQFYQAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ++G+ + +    V+      +F +++ Y ++LL  
Sbjct: 150 YQKEAAVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERKLLRQWFLKITDYAEELLQD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   + +         +G
Sbjct: 207 LDQLTGWPEKVRKLQANWIGKSTG 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 80/195 (41%), Gaps = 28/195 (14%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   +    + +SKS  N + P EVI + G D  R F++ +    KD  +D   +
Sbjct: 604 PKDPETGEPLEVSYQTMSKSKYNGVAPEEVINKYGADTARMFILFKAPPEKDLEWDDADV 663

Query: 347 KKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           +         G    ++R   ++ +    +       A  + ++ +       ++EI  +
Sbjct: 664 E---------GQFRFLNRVWRLVTQYPVIEPTTKQGDALAKEEKELRRAIHTAIKEITAD 714

Query: 405 M-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +   ++ A+++++ L + +              T+     +V+Y   E I  L +LL 
Sbjct: 715 LGEEYQLNTAVSELMKLSNAL--------------TDASCKDSVIYT--EGIETLLLLLA 758

Query: 464 AFVPKLANKIFDILF 478
            F P ++ +++  L 
Sbjct: 759 PFAPHISEELWQQLG 773


>gi|331014752|gb|EGH94808.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 868

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 115/396 (29%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  +       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVILPEDVVPDGAGSPLARMPQFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++              + R   +                A T+ 
Sbjct: 655 MFASPPDMSLEWSDSGVEGSH---------RFLRRVWRLAQAHVGQGASGSLDIAALTDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKAVRRSIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  + +LL    P ++++++  L   +
Sbjct: 757 ----LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|219684226|ref|ZP_03539170.1| valyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672215|gb|EED29268.1| valyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 875

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 157/414 (37%), Gaps = 48/414 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + + ++   + ++ +S K   +K          ++ +    + ++   G  Y +  
Sbjct: 295 ILTQDGKLNENVPLQYQGLSIKDARFKIEIELM----EKGFLQGVKKHRQQVGHCYRSG- 349

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++      +F  +    +K L   ES      P +  N    +  S +KD  +SR+  
Sbjct: 350 EVIEPYLSTQWFVSMKPLAEKALKALESGELRFYPKKWENT-YKYWLSNIKDWCISRQLV 408

Query: 215 DWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
            WG +IP                              DP  ++  W  +     ++ G+ 
Sbjct: 409 -WGHRIPAWYNIDTLELIISDTDPSLDEKNVGKRFVQDPD-VLDTWFSSWLWPFSSLGWP 466

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +        ++P +  +   DI+ F    +       +  +P      +      +G K+
Sbjct: 467 NITV-DFENYYPTNTLITAYDIIFFWVARMVMAGLEFTGQIPFRDVYITPLLRDKQGRKM 525

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+++I E G D+LR+ L      G+D   D       + A  AN + N  S
Sbjct: 526 SKSLGNGIDPLDIIHEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--LGAKFANKVFN-AS 582

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           + + + L++ +        F + D+ +L+  +  +  +  +  N   + A   V      
Sbjct: 583 KFILLNLENREVFNDLK--FNDIDKWLLTSLNSAILGVESSFANYKYNEASKFVYEFFWN 640

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+ 
Sbjct: 641 DFCDWYIEISK-IDLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIYS 693



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA   ++ D+L R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQAVFER 95

Query: 65  A---------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                         +  V +  +             + +    D S + F  T ++    
Sbjct: 96  NLKKIGKSKDDFEREELVKEIFKLKDKHRGVIVNQIKKLGASYDHSRERF--TLDESLCK 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 154 AVNKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|281357939|ref|ZP_06244424.1| isoleucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315597|gb|EFA99625.1| isoleucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 1041

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 8/263 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y         + +PAD    G D     F+ +   A  L    
Sbjct: 514 VFDCWFESGSMPYAQQHYPFENKRHFEENFPADFIAEGLDQTRGWFYTLVVLATALFDRP 573

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP+ V+   G DA+R F++       +D  + +
Sbjct: 574 PFKNVVVNGLVLAENGQKMSKRLRNYPDPMVVVNTYGADAVRLFMLGSQVVRAEDLKFSE 633

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MIPTPGAFTESDESILSVCSRVLQ 399
            G+K+ +   +      L   +    +  Y+     + P   A    D  ILS  S++++
Sbjct: 634 AGVKEVLRGIMIPMWNALAFFTTYANVDHYNPGRGEVKPPAHASNVLDRWILSSASQMVE 693

Query: 400 EIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           EIR  +    + +A  +    + ++ + Y    +    K ++             V+   
Sbjct: 694 EIRGELDAYNLQKAANRFSRFIDDLTNWYIRRSRRRFWKSSDDADKQEAYATLHYVLLTF 753

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
           A     F+P     I+  L   +
Sbjct: 754 AKTAAPFIPFTTEAIYRALRTEE 776



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 19/174 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  + G  V    G D HG  +    +         
Sbjct: 48  PPFATGLPHYGHLLAGTIKDVVPRYQTMRGKYVERRFGWDCHGLPVENEMEKQLNLSSKR 107

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  +  + + +   + + +  RT ++   ++   ++K +
Sbjct: 108 DIEAYGIDKFNEACRSIVLRYTSEWEKIVNRMGRWVDFRNGYRTMDRSFMESIWWVFKNL 167

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            D+G +Y+G     Y  R     ++ E  +G       A     +   EE  +F
Sbjct: 168 WDQGLVYEGYKILPYCPRCATPLSNFEANQGYKDVVDPAITIRFKVKGEENTYF 221


>gi|148244174|ref|YP_001218868.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166231651|sp|A5CY09|SYL_VESOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146326001|dbj|BAF61144.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 815

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 6/213 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y  +   YP+ + H+GH     I DV++RF R+ G +V+   G D  G     AA
Sbjct: 31  SKEKYYCLSMFPYPSGRLHMGHVRNYSIGDVISRFQRMQGKNVMQPIGWDGFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                +   +  +N    +   + L   YD    I T   +++   + L+ K+  K  IY
Sbjct: 91  LKNKESPAKWTYKNINYMKTQLNQLGFGYDWAREITTCHPKYYRWEQWLFIKLFKKNLIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G         +  ++  E   +F R++ Y ++LL+  
Sbjct: 151 KKKAIVNWDPVDQTVLANEQVING----RGWRSNALIEKKEISQWFIRITNYAEELLNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           +    +  P++   +       GL+     R +
Sbjct: 207 DKLYGWPDPVKIMQKNWIGKSIGLEITFSRRNS 239



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 107/278 (38%), Gaps = 30/278 (10%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPADLHVIGKDILR 269
               G K   +       + ++   +   T   +N      +   +   D ++ G +   
Sbjct: 473 CPKCGSKAHRETD-TFDTFFESSWYFARHTCNNNNNAMLDKRVNYWLEVDQYIGGVEHSI 531

Query: 270 FHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            H +Y   F         +  + P  K + + G +L  G K+SKS GN +DP ++I++ G
Sbjct: 532 LHLLYARFFNKLLRDEGLIKYDEPF-KNLLTQGMVLKNGVKMSKSKGNTVDPTKMIKKYG 590

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D +R F++      +D  ++  GL+          +  LVS  ++   KDY        
Sbjct: 591 ADTVRLFILFAAPPMQDLEWNNSGLEGAHR--FIKKVYRLVSIYIN-DSKDYIVNHLNIN 647

Query: 382 AFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
              ++ + I     + L +I +++      + A++ ++  V  ++++          KT+
Sbjct: 648 FLNKTQKHIRRKIHQNLVKITDDINRRYTFNTAISTLMESVDIINKF---------TKTD 698

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  + +  E I  + + L    P + + ++  L 
Sbjct: 699 TQS----IALRSESINIILLTLSPITPHICHYLWLKLG 732


>gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|8928370|sp|O84022|SYI_CHLTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3328409|gb|AAC67609.1| Isoleucyl-tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
          Length = 1036

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|224045554|ref|XP_002199212.1| PREDICTED: similar to leucyl-tRNA synthetase 2, mitochondrial
           [Taeniopygia guttata]
          Length = 903

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 78  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDAVARFQKMRGMQVINPMGWDAFGLPAENA 137

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R   D L +S+  +  + T    ++   + L+ K+ + G +
Sbjct: 138 AVEHGLHPASWTQSNIQHMRKQFDALGLSFTWEREVTTCLPEYYKWTQYLFLKLFEAGIV 197

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    D          V+    + +F + +AY   +   
Sbjct: 198 YQKEALVNWDPVDQTVLANEQV---DDNGCSWRSGAKVEQKYLKQWFIKTTAYAKAMFDA 254

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+    E +   I   
Sbjct: 255 LSDLPEWYGIKEMQANWIGDC 275



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 107/319 (33%), Gaps = 64/319 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        +   D              Y          +   A +W P DL++ GK
Sbjct: 501 VNCSCPRCKAAARREVDTMDTFVDSAWYYLRYTDPHNTDRPFNSDLADYWMPVDLYIGGK 560

Query: 266 DILRFHAIYWPAFLLSA--------NLPLPK----------------------------- 288
           +    H  Y   F              P  K                             
Sbjct: 561 EHAVMHLFYARFFSHFCHDLKMTKHKEPFHKLLVQGLIKNQTFRLKTTGQCLKREEVDLT 620

Query: 289 -----KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD- 342
                 + +   +    EK+SKS  N IDP E+++E G+D LR +++      +D  +D 
Sbjct: 621 GSEPVHLKTGEKLQVAWEKMSKSKYNGIDPEEIVKEYGIDTLRLYILFAAPPEQDILWDA 680

Query: 343 -KDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
             D +   +R    L   +  L+    S  + + + +     A       I    + V+ 
Sbjct: 681 KTDAMPGVQRWQIRLWALVTKLIEARTSGTMPNPELLNKKEKAEA---RKIWEQKNLVIS 737

Query: 400 EIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           E+ +   ++ L + A+++++SL    +    A +P  L  T  + A          +  L
Sbjct: 738 EVTKYFTEDHLFNAAISRLMSL---TNVLQQAPRPLALHSTEFEDA----------LASL 784

Query: 459 AILLQAFVPKLANKIFDIL 477
            I++    P +A++++  L
Sbjct: 785 CIMVAPMAPHIASEMWKGL 803


>gi|291320317|ref|YP_003515579.1| leucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752650|emb|CBH40623.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 779

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+   H+GH     I D LARF+R  G +VL   G D  G     AA  
Sbjct: 32  PKKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRKGFNVLHPFGWDAFGLPAENAAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N  +  +    L IS+  +    T+++ +    + ++ K+ + G +Y+ 
Sbjct: 92  HNIHPKTWTYKNISSMNENIKKLGISFAWNYECITSDEIYTRWEQEIFIKMWNNGLVYRK 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE- 181
                +  +D+    +++V  G           P++  E E Y+ ++  Y  +L    E 
Sbjct: 152 KALLNWCNKDKTVLANEQVING----CCWRCDEPIELKETEQYYLKIRDYAKELQESLEL 207

Query: 182 -SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                    +  +N  I++    L   S S       I+I  + +  + V
Sbjct: 208 LKGNWPDKVLSMQNNWINYKTGFLATFSDSLNKLKTNIEIFVNDKKDLDV 257



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 123/352 (34%), Gaps = 51/352 (14%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--K 212
           +P Q +  + +      Y    +         I+P +  N  +   ++     S +    
Sbjct: 372 SPSQSINMQDWGISRQRYWGAPIPMIHCAKCGIVPEKLENLPVKLPENVDFSKSGNPISS 431

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG------------SKAKFWP-AD 259
             +W                D    +  ++ Y                     ++W   D
Sbjct: 432 NLEWMQTKCPKCNSEALRETDTFDTFFESSWYFLRYTCPPELREKVALDKDSVEYWNSVD 491

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F         +S   P  K + + G +L  G K+SKS GN +
Sbjct: 492 TYIGGIEHAILHLLYARFFTKVMSDLGYVSFREPF-KSLLTQGMVLKDGAKMSKSKGNTV 550

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P +++E+ G D +R F++      K+  +  D ++        N + NL S+ +   +K
Sbjct: 551 SPTDLLEKYGADTVRLFILFAAPPAKELEWSDDSVEG--CNRFINRLFNLYSKVIP--IK 606

Query: 372 DYD-GMIPTPGAFTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDR 426
           D+         + +E ++S      + L++      +N      +  +A ++     ++ 
Sbjct: 607 DFSIIKNIDHSSLSEFEKSARMKLYQSLKKQESIYLDNRNEFAFNTLIAYIMET---LNS 663

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           Y         +K           + +E       +L+ F+P LA ++ + LF
Sbjct: 664 Y---------EKIEN------NSLLLEFFYISLNILEPFIPHLAWELSEKLF 700


>gi|83815822|ref|YP_444601.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757216|gb|ABC45329.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 1080

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 96/272 (35%), Gaps = 21/272 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+         Y    +      +PAD    G D     F++++  A ++   +
Sbjct: 529 LIDVWFDSGAMPYAQWHYPFENEDDFEANFPADFIAEGVDQTRGWFYSLHAIATVVFDEV 588

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                V +   +   G K+SKS+GN ++P EVI++ G D +R+F++      +   + + 
Sbjct: 589 AYENVVVNGLVLDEDGNKMSKSVGNTVEPFEVIDDYGADVVRWFMMSNAPPWESIRFSER 648

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEI 401
           GL+  +       + N+     +    D   Y+          E D+ I+S      Q +
Sbjct: 649 GLRD-LRRTFFGTLENVYRFFATYANIDGFAYERDRMPVEERPELDQWIISRLHTTTQAV 707

Query: 402 RENMQNQLIHRALAQVISLVSEV-DRYFDAQKP--WELKKTNP------------DRAST 446
              +       A   V   V E+ + +    +P  W  KK                +   
Sbjct: 708 EAALDEYDPTTAARAVEDFVEELSNWHLRRSRPRFWASKKGEQNGPAGQGGTVAAAKKEA 767

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 E +   A L+    P     ++  L 
Sbjct: 768 AYQTIHECLAATAKLMSPIAPFFGEWLYRTLG 799



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +            N  P I H     I D+  R+  + G  V    G D HG  +    
Sbjct: 38  GQPTFTFYEGPPTANGTPGIHHVLARAIKDIFCRYKTMQGYQVDRKAGWDTHGLPVEIEV 97

Query: 63  QNA-----GVTTKVF-VDQNSR-------NFRDMADVLD------ISYDDFIRTTEKRHH 103
           +           + + +++ +         ++D+ D L       +  DD   T E  + 
Sbjct: 98  EEELGLETRAEVEEYGIEKYNAACRGSVLEYKDLWDNLTQRMGYWVDLDDPYVTFETDYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +T   L K+I ++  +YKG    WYS       +  EV  G +
Sbjct: 158 ETVWWLLKQIEEEDLLYKGHKIQWYSPGSHTVLSSHEVSLGYE 200


>gi|297748150|gb|ADI50696.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis D-EC]
 gi|297749030|gb|ADI51708.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis D-LC]
          Length = 1041

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 516 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 575

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 576 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 635

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 636 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 695

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 696 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 755

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 756 IAPFIPFIAEDMYQQLRGETDPES 779



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 50  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 109

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 110 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 169

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 170 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 229

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 230 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 279

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 280 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 326


>gi|291529839|emb|CBK95424.1| isoleucyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 1049

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 67/448 (14%), Positives = 137/448 (30%), Gaps = 16/448 (3%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    D  G   A+          +FV +         D   + +D     
Sbjct: 340 KVGRKYDLPFVQLVDGKGNMTAETPYAG-----IFVKKADPMVLKDLDEKGLLFDAPKFE 394

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               H   C       + +    K        +R+    N      G +      ++  V
Sbjct: 395 HSYPHCWRCDTPLLYYARESWFIKMTAVKDDLIRNNETINWIPESVGKNRFGDWLEN--V 452

Query: 158 QWMEEEGYFFRLSA---YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           Q        +  +    ++ +    +       L     N             +++ K  
Sbjct: 453 QDWGLSRNRYWGTPLNIWECECGHKHAIGSIEELKSMSDNCPDDIELHRPYIDAVTIKCP 512

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G ++   P+ ++  W D+ +       Y         + +PAD      D     F++
Sbjct: 513 HCGKQMKRVPE-VIDCWFDSGSMPFAQHHYPFENKEKFEQQFPADFISEAVDQTRGWFYS 571

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + LL    P    +     +   G+K+SKS GN +DP E + E G DA+R++    
Sbjct: 572 LLAISTLLFNKAPYKNVIVLGLVLDKDGQKMSKSKGNAVDPFESLAEHGADAIRWYFYTN 631

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESI 390
            A      +    + +     ++          +   + ++D           +  D+ +
Sbjct: 632 SAPWLPNRFHAKAVNEGQRKYISTLWNTYAFYVLYANIDNFDATKYTLDVDKLSVMDKWL 691

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS  + V+ E+ +N+ N  I  A   +   V E+ + Y    +     K           
Sbjct: 692 LSRLNTVVGEVDDNLANYRIPEAARALQDFVDEMSNWYVRRSRERFWSKELTQDKINAYM 751

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A       P + + I+  L
Sbjct: 752 TLYTALVTIAKTSAPMTPFVCDDIYRNL 779



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G +V    G D HG  +   
Sbjct: 38  KGDKTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYNVPRKAGWDTHGLPVELE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + + +  +      DD   T     
Sbjct: 98  VEKMLGLDGKDQIEKYGLDPFITKCKESVWKYKGMWEEFSRTVGFWADMDDPYVTYHNNF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 158 IESEWWALKQIWEKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 201


>gi|149369514|ref|ZP_01889366.1| isoleucyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356941|gb|EDM45496.1| isoleucyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 1132

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 7/272 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYW 275
           K       ++ VW D+ +       Y           W  AD    G D     F+ ++ 
Sbjct: 595 KPMKREADLIDVWFDSGSMPYAQWHYPFENKEKVETTWRKADFIAEGVDQTRGWFYTLHA 654

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A ++  ++     V +   +   G+K+SK LGN  DP E ++  G DA R++++     
Sbjct: 655 IATMIFDDVAYKNVVSNGLVLDKNGQKMSKRLGNAADPFETLKTYGPDATRWYMISNANP 714

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSV 393
             +  +D DG+ +  N             S+   L +++            E D  ILS 
Sbjct: 715 WDNLKFDLDGISEVRNKFFGTLYNTYSFFSLYANLDNFNYSEADIALEKRPEIDRWILSE 774

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + ++  + E        +A   + + V E   + +    +    K +  +   +     
Sbjct: 775 LNTLVATVDEAFTEYEPTKAARAIQNFVGENLSNWFVRLSRRRYWKGSYSEDKISAYQTL 834

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              +  +A L     P   ++++  L  A  N
Sbjct: 835 YTCLLTVAKLGAPIAPFFMDRLYRDLVAATGN 866



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 50/148 (33%), Gaps = 23/148 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P I H     I D+  R+    G  V    G D HG  I    + 
Sbjct: 41  EPFVFFEGPPSANGMPGIHHVMARAIKDIFCRYKTQKGFKVDRKAGWDTHGLPIELGVEK 100

Query: 65  AGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
               TK                      + D  ++   +    +D+  D +I T + ++ 
Sbjct: 101 ELGITKEDIGTKISVEDYNDACRKAVMRYTDVWNKVTEEYGYWVDME-DPYI-TYKPKYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
           ++   L K+I +K  +YKG     YS +
Sbjct: 159 ESVWWLLKQIYNKDLLYKGYTIQPYSPK 186


>gi|154250197|ref|YP_001411022.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769399|sp|A7HN82|SYL_FERNB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154154133|gb|ABS61365.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 819

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++K Y      YP+   H+GH    +I D++AR+ R+ G +VL   G D  G     A
Sbjct: 29  SDKKKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMQGYNVLHPFGYDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +   N    R     + ISYD    + T  + ++   + ++ K+ + G  
Sbjct: 89  AIAHKIHPKKWTLDNINVIRGQIKKIGISYDWNREVITCTEDYYKWTQWVFLKLYEAGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    +++V  G            V     E ++F+++ Y +KLL  
Sbjct: 149 YKKPGAVNWCPSCQTVLANEQVKDGK----CERCGTTVTMKYLEQWYFKITDYAEKLLEG 204

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++          +G
Sbjct: 205 LDRLPGWPEHVKTMQRNWIGKSTG 228



 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 143/438 (32%), Gaps = 41/438 (9%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           E+G     A          F    +   + +    D  ++   R  E+         +  
Sbjct: 330 EYGTGAIMAVPAHDQRDYDFAKTYNLPIKQVIKPKDGEWNINERPYEEEGIMINSGPFDG 389

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           +     I +           +              Q Y     P+ + E+ G        
Sbjct: 390 LESSKGIEEVTKYIEEKGFGKKSVQYKLRDWLISRQRYWGAPIPIVYCEKCGIVPVPEKD 449

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
               L                +E               R       ++     ++   W 
Sbjct: 450 LPVRLPENVEFLPTGQSPLTLSEEFKHTTCPKCGGPAHR-------EVETMDTFVDSSW- 501

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y+         +     +W P D ++ G +    H +Y             L  +
Sbjct: 502 -YFLRYVNPKLDDKPFESDDVNYWLPVDQYIGGVEHAVLHLLYSRFITKVLHDLGYLKFD 560

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  + +F+ G I   G K+SKS GNV+ P ++I + G D LR +++      KD  ++ 
Sbjct: 561 EPF-ENLFTQGMIYKDGWKMSKSKGNVVSPDDMINKYGADTLRMYILFMAPPEKDAEWND 619

Query: 344 DGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            G+    R    L N    ++    S   K+          F + ++++      ++++I
Sbjct: 620 AGIDGVNRFIKRLWNNYYKILDIINSNDTKN-------ENEFGKEEKNLRRKLHAMIKKI 672

Query: 402 RENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +E+++     + A+A ++   +++  Y +  K       +P++      +  E+  ++ +
Sbjct: 673 KEDIEGGFKFNTAIAGLMEFNNQLSDYLENTK-------SPNKK-----LLREIAEKVVL 720

Query: 461 LLQAFVPKLANKIFDILF 478
           +L  F P +A +++  L 
Sbjct: 721 ILSPFAPHMAEEMWHDLG 738


>gi|296436459|gb|ADH18629.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 1036

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|157415046|ref|YP_001482302.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386010|gb|ABV52325.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747687|gb|ADN90957.1| Valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 870

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 146/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEHNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPD--------GSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +                F+P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSENDLEDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|82617316|emb|CAI64228.1| probable isoleucyl-tRNA synthetase, partial sequence [uncultured
           archaeon]
          Length = 492

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 103/274 (37%), Gaps = 13/274 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++  W D+         Y    D    + +PAD      D     F+++   +  +  
Sbjct: 24  GDVIDCWYDSGAAPFAQWHYPFEKD-EFERNFPADFITEAIDQTRGWFYSLLAISTTIFD 82

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  KG K+SKS GNV+D    +++ G DALR++         D  + 
Sbjct: 83  TAPYLNVLSLGHILDEKGVKMSKSKGNVVDITSTLDKEGADALRWYFYTAGPLSDDVRFT 142

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
           + G+ ++    L     +        ++ +++              D  I+S  + + +E
Sbjct: 143 EKGIIEKQKKFLNTLWNSYFFFVTYAVIDEFNPNKKEIPVEKRNAMDRWIISRLNTLTKE 202

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKT-NPDRASTVLYVTVEVI 455
           +  +++   IH A  ++   +     + Y     ++ W ++   + D A        EV+
Sbjct: 203 VIVSIERFEIHVAARKMEEFIVNDLSNWYIRRSRRRFWIVEADFDKDSA---YITLFEVL 259

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             L  LL  FVP +   I+  L     +   +S+
Sbjct: 260 VSLCKLLAPFVPFITEHIYQKLVRGVSDDVLESV 293


>gi|325283179|ref|YP_004255720.1| Isoleucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314988|gb|ADY26103.1| Isoleucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 1091

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 82/463 (17%), Positives = 156/463 (33%), Gaps = 49/463 (10%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD---MADVLDISYDD-FI- 95
              DV    G D+HG  I +     G   K       R+ ++   M     I +   F  
Sbjct: 374 RQYDVPLVFGVDDHG--ILQVTHEKGQFFKDADKGLIRDLKERGLMFWAGTIKHRYPFHD 431

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           RT +                     K  Y      R E    ++ +        +     
Sbjct: 432 RTGDP--------------ILYFAKKSWYIKTAEHRAELLEQNENINWVPHNIKHGRFGK 477

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--- 212
            ++      +      Y    L ++ S    +  +  R E+ +     L +L L R    
Sbjct: 478 WLEGN--VDWAISRERYWGTPLPFWMSDAGDLKVVGSRAELAALTGRDLSELDLHRPYID 535

Query: 213 --TFDWGIKIPDDPQYIMYVWIDALTNYLTTTG-------YLDNPDGSKAKFWPADLHVI 263
             TF  G +       ++ VW D+        G                A+ +PAD    
Sbjct: 536 DITFTLGGQEYRRIPEVLDVWFDSGAMPYAQWGLLLDDEGNAVRGGEEFARHYPADFICE 595

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
             D     F+ ++  + LL         +     +  KG K+SKS GNV+ P+ + ++ G
Sbjct: 596 AIDQTRGWFYTLHAISTLLYGQPAYRNVISLGHIVDEKGFKMSKSKGNVVAPLPLFDQYG 655

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG----MI 377
            D++R+++      G    +  + L         + + N+ S  V  +  + D       
Sbjct: 656 ADSVRWYMFTASDPGDQKRFS-ERLVGEAQRGFVSTLWNVYSFFV--LYANLDKPDLSSA 712

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPW 434
           P      E D  +LS     ++++ + +++         + + V E+ + Y      + W
Sbjct: 713 PAVSERPEMDRWLLSRLEETVRDVTDALEHYDARGGGQALATFVDELSNWYVRRSRSRFW 772

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + N D A+       E +  +++L   F P LA+++F  L
Sbjct: 773 TEGEENVDTAA--YATLHEALLTVSLLAAPFTPFLADELFRNL 813



 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 24/128 (18%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  P + H       D+  R+  + G  V    G D HG  +  + +         
Sbjct: 49  PPTANGLPALHHVLARAFKDLFPRYRVMQGYHVTRKGGWDTHGLPVEISVEKKLGLQGRN 108

Query: 66  ---------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
                            +    + + +     M   +D+  DD   T ++ + ++   L 
Sbjct: 109 HGASREELEEFNRLCRTSVWETIQEWNTMTERMGYWVDL--DDPYVTYDQEYVESVWNLL 166

Query: 111 KKISDKGD 118
           K++  +G 
Sbjct: 167 KRMHARGL 174


>gi|300727074|ref|ZP_07060493.1| valine--tRNA ligase [Prevotella bryantii B14]
 gi|299775618|gb|EFI72209.1| valine--tRNA ligase [Prevotella bryantii B14]
          Length = 899

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 124/365 (33%), Gaps = 51/365 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + +  L    +      P + +N         +KD  +SR+   
Sbjct: 366 PIEPKLSTQWFLKMEHFAEIALGPVMNDDIEFYPKKYKNT-YRHWLENIKDWCISRQ-LW 423

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           WG +IP                                         +  +  W  +   
Sbjct: 424 WGHRIPAYYFSTADGKKDVVVAETAEEALKLAQQKNANLKAEDLTQDEDALDTWFSSWLW 483

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    ++NPD  +   ++P    V G DI+ F    +    +     +P     F+  
Sbjct: 484 PISLFDGINNPDNEEINYYYPTADLVTGPDIIFFWVARMIMAGYEYRGKMPFKHVYFTGI 543

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++  N   
Sbjct: 544 VRDKLGRKMSKSLGNSPDPIMLIEKYGADGVRMGMMLAAPAGNDILFDESLCEQGRN--- 600

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
                N +  +  +I       I  P     +     +    +  E++E  +   I  AL
Sbjct: 601 ---FNNKIWNAFRLIEGWQTADIEQPEENKIAINWFDAKLKVINAEMQEQFKQYRISEAL 657

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V  L  +     Y +  KP  +              T++    L  +L  F+P +  +
Sbjct: 658 MTVYRLFWDEFSAWYLEMIKPAYIDGKAQPIDQITYNSTLQFFETLMKMLHPFMPFITEE 717

Query: 473 IFDIL 477
           ++  +
Sbjct: 718 LWQHI 722



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 75/245 (30%), Gaps = 25/245 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R++G +  +  GTD          
Sbjct: 32  GREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T ++    
Sbjct: 92  VNKLAQEGIKKTDLTREQFLEHAWDWTNEHGGIILKQLRRLGCSCDWDRTGFTMDETRSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG------QYYNAQHNPVQ 158
           +   ++  + +KG IY+G     +  + +   +D+EV    +       +YY  + + V+
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPQAQTALSDEEVIYKDEHSKLYHLKYYVVEQDKVE 211

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +E G            +         +              + LK L +     +  I
Sbjct: 212 RKDE-GNIMHKDEKGYYAVVATTRPETIMGDSAMCINPDDIKNTWLKGLHVVVPAVNREI 270

Query: 219 KIPDD 223
            + +D
Sbjct: 271 PVIED 275


>gi|157115230|ref|XP_001658155.1| leucyl-tRNA synthetase [Aedes aegypti]
 gi|108876986|gb|EAT41211.1| leucyl-tRNA synthetase [Aedes aegypti]
          Length = 896

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 79/222 (35%), Gaps = 5/222 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I+D +ARF+RL+G +VL   G D  G     A
Sbjct: 67  SDKPKRYVLAMFPYPSGNLHMGHVRVYTISDAMARFYRLNGANVLHPMGWDAFGLPAENA 126

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    +  QN    R+  ++L  S+D      T +  ++   + L+  + + G  
Sbjct: 127 AMQRKIPADKWTKQNIEQMREQLEMLQFSFDWEREFATCDPEYYRWTQKLFLMLYEDGLA 186

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   DE    D++V    D          V+      +F + + +   L   
Sbjct: 187 YQKEAQVNWDPVDETVLADEQV---DDNGCSWRSGAKVEKKVLRQWFVKTTRFAKALYDG 243

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                        + +          +  L  K     I I 
Sbjct: 244 LADPTLEDWKDIIKLQKHWIGDCDGYNFELKVKGQKTSIPIW 285



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 24/197 (12%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP+EV++E G D LR  L+ ++A      + +      +N      + 
Sbjct: 592 WEKMSKSKLNGVDPLEVLKEHGCDTLRMILLGDVAPTSHRNWSEATFPGILNWQKRIWMT 651

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVI 418
               R +   ++      P    F + D  +    +        N + +  +   ++++ 
Sbjct: 652 MHDYRLLRSAIEP-AQTPPDTEEFLQQDRKLWDARNYFSAGATFNYKFSHQLSVGISKMQ 710

Query: 419 SLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI- 476
            L +          P  +  +   +RA               I+L    P  A+++++  
Sbjct: 711 GLTNA----IRRSAPEVVAFSAQYERAIAAQ----------IIMLAPMAPHFASELWEQF 756

Query: 477 ------LFVADENRCFQ 487
                 L  + E   + 
Sbjct: 757 RALPNRLNSSSEEIQWD 773


>gi|87121687|ref|ZP_01077574.1| valyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86162938|gb|EAQ64216.1| valyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 927

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 70/395 (17%), Positives = 132/395 (33%), Gaps = 81/395 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++  +       +   E+     +P +  N   S+++  L+D  +SR+   W
Sbjct: 354 IEPYLTNQWYVAVETLAKPAIEAVENGDIQFVPKQWENTYFSWMRD-LQDWCISRQ-LWW 411

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +      T G+ +
Sbjct: 412 GHQIPAWYDAEGKVYVANTEDEVRAKYGLAADVTLNRDNDVLDTWFSSALWTFATQGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  KA    +D+ V G DI+ F    +       +  +P      +      +G+K+S
Sbjct: 472 ETEDFKAFS-ESDVLVTGFDIIFFWVARMIMMTLKFTNKVPFKTVYITGLIRDERGDKMS 530

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KS GNVIDP+++I                                     +  G DALR+
Sbjct: 531 KSKGNVIDPLDLIGGIDLESLVSKRTSGMMQPRLAAKVEKATRETYPEGIQAYGTDALRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTES 386
            L    + G+D  +D + L+     +  N I N  +R V M  +++D          + +
Sbjct: 591 TLCSLASGGRDIKFDLNRLEG--YRNFCNKIWN-ATRYVLMNTEEHDCGQNGGDAELSLA 647

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--PD 442
           D+ I+S   +    + +         A   +   +     D Y +  KP  L   N  P 
Sbjct: 648 DKWIISRLQKAETAVNQAFDTHRYDLASQALYEFMWHEYCDWYLELSKP-VLWDENATPA 706

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +        V V+     L    +P L  +I+  +
Sbjct: 707 QLLGTRRTLVRVLESFLRLAHPMMPFLTEEIWQKI 741



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E +   I           H+GHA++  + D + R  R+ G   L+  GTD  G       
Sbjct: 29  EGDPFSIMIPPPNVTGTLHMGHAFQHTLMDAMIRRERMQGKRTLWQPGTDHAGIATQMVV 88

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        +  Q+     D   V+  S  +D    T +     
Sbjct: 89  ERQLAADNITRHDLGREKFLEKVWDWKAQSGGTISDQMRVMGDSVAWDKERFTMDPGMSA 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ D+G IY+G     +        +D EV    +  +      P+
Sbjct: 149 AVQEVFVRLFDEGIIYRGQRLVNWDPVLHTAISDLEVISEEENGFMWYFRYPL 201


>gi|323345686|ref|ZP_08085909.1| valine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093800|gb|EFZ36378.1| valine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 878

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 120/363 (33%), Gaps = 54/363 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++  + D  L           P + +N         +KD  +SR+   
Sbjct: 350 PIEPKLSTQWFLKMQHFADIALQPVMDDNIKFYPSKYKNT-YRHWLENIKDWCISRQ-LW 407

Query: 216 WGIKIP-------------------------------------DDPQYIMYVWIDALTNY 238
           WG +IP                                     +  +  +  W  +    
Sbjct: 408 WGHRIPAYYFTIAGKREYVVAETAEKALVEAQKRDATLTKTDLEQDEDCLDTWFSSWLWP 467

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    ++NP+  +   ++P    V G DI+ F    +    +     +P     F+   
Sbjct: 468 ISVFDGINNPNNKEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYRGQMPFKHVYFTGIV 527

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+   ++  N    
Sbjct: 528 RDKLGRKMSKSLGNSPDPLMLIDKYGADGVRMGMMLSAPAGNDILFDESLCEQGRN---- 583

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
               N +  +  +I          P     + +   +      +E+ +      I  AL 
Sbjct: 584 --FNNKIWNAFRLIKGWQIADKEQPHTNRLATQWFEAKLRITNKELNDLFDKYRISEALM 641

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L  +     Y +  KP      +          T+     L  +L  F+P +  ++
Sbjct: 642 VVYRLFWDEFSSWYLEMIKPAYGVPIDKQ----TYENTLLFFDILLKMLHPFMPFITEEL 697

Query: 474 FDI 476
           +  
Sbjct: 698 WQH 700



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   +           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  NREPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMKGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++          L  S  +D    T +K   +
Sbjct: 92  VNKLAEQGIKKTDITRDQFLEHAWDWTHEHGGIILQQLRKLGASCDWDRTAFTMDKTRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFVDLYNKGLIYRGVRMVNWDPQAQTALSDEEVVYKDEH 194


>gi|294675814|ref|YP_003576429.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474634|gb|ADE84022.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 851

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 6/204 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKMSCGFSVLHPMGWDAFGMPAENAAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N  + R     L +S D      T +  ++   + ++  + + G +Y+
Sbjct: 91  ERGGHPKDWTYSNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMFLDMLEAGLVYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S Y  +LL+  +
Sbjct: 151 KNAVVNWDPVDMTVLANEQVEDG----RGWRSGALVERKELTQWFFKISDYAGELLAALD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLK 205
              ++   +            GL+
Sbjct: 207 GLKDWPEKVRLMQANWIGQSRGLQ 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 126/411 (30%), Gaps = 94/411 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----------GLKD 206
           V       +      Y    +         ++P ++ N  I                   
Sbjct: 419 VTKYRLRDWGLSRQRYWGCPIPVVHCASCGVVPEKKENLPIRLPDDVTFDKPGNPLDRHP 478

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PADLHVI 263
                     G     +    M  ++D+   Y                A +W   D ++ 
Sbjct: 479 TWRDCSCPKCGAPARRETD-TMDTFVDSSWYYARFTAPHATTPTVAEDADYWMNVDQYIG 537

Query: 264 GKDILRFHAIY----WPAFLLSANLP-----LPKKVFSHGFILHK--------------- 299
           G +    H +Y      A   + +LP         +F+ G + H+               
Sbjct: 538 GIEHAILHLLYSRFFARAMAKTGHLPAKAIEPFDALFTQGMVTHEIYKTTDANGRPVWHL 597

Query: 300 ----------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                                   K+SKS  NV+DP+ +I + G D  R+F++ +    +
Sbjct: 598 PEEVDLETGTLKATGEKVEIIPSAKMSKSKKNVVDPMNIIAQFGADTARWFVMSDSPPER 657

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSR 396
           D  +   G +          + NL  R  S+           P       DE++L    R
Sbjct: 658 DVEWTASGAEAACKH--LTRVWNLCDRIASL-----------PDDLPPREDEALLRAMHR 704

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + ++  +++N   ++A+A++    +             L K++  +      V  + +R
Sbjct: 705 AIADVTFSIENFAFNKAIAKLYEFTN------------TLAKSDASK-----PVRQQAMR 747

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
            LA L+   VP LA  ++       E    ++   +  P  ++  T   PI
Sbjct: 748 TLAQLMAPMVPHLAEDVWAH--QGGEGLVVRAPWPKADPAMLVEDTVTLPI 796


>gi|294085220|ref|YP_003551980.1| Leucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664795|gb|ADE39896.1| Leucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 862

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 76/202 (37%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA 
Sbjct: 36  KPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARFRRAQGFNVLHPMGWDAFGLPAENAAM 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +  +N    R     + +SY  D  + T    ++   + ++ K  + G  Y+
Sbjct: 96  ERGIHPGKWTVENIAAMRTQLKSMGLSYDWDRELATCTPDYYQHEQRMFLKFLEAGLAYR 155

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   +     +++V  G           PV+      +F R++ Y D LL+  +
Sbjct: 156 KESWVNWDPVENTVLANEQVVDG----RGWRSGAPVERRLLSQWFLRITKYADDLLAAID 211

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   +            G
Sbjct: 212 RLDRWPDRVRLMQHNWIGKSEG 233



 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 109/344 (31%), Gaps = 49/344 (14%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           + E   YF R    +       E+   ++   +    V   V   L     +R   + G 
Sbjct: 508 FFESSWYFLRYCDPKHPHGFSPEAAHYWMPVDQYIGGVEHAVLHLLYSRFFTRALSEVGY 567

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
              D+P          L                K   +P D+   G D      +     
Sbjct: 568 LTLDEP-------FAGLMTQGMVCHQTFQDQHGKWL-FPTDVERDGDD----WVMRSDKS 615

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++A                + EK+SKS  NV+DP  +I+  G D  R F++ +    +D
Sbjct: 616 AITAG---------------RIEKMSKSKRNVVDPEIIIDTYGADTARLFMLSDSPPERD 660

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             + + G++    +     I  L +      L      +P        D  ++    + +
Sbjct: 661 LEWTESGVEGA--SRFLKKIWRLATDD---SLAAAGAKMPDNADQKALD--LVKTVHKTI 713

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             I  +++    +RA+AQ+ +L +          P  +      R +         I  L
Sbjct: 714 LAISRDIEEFRFNRAVAQLHTLSNA----ITNLAPDTVGSAEARRMA---------IENL 760

Query: 459 AILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLH 500
             L+    P +A +++ +L       N  +   D  L     + 
Sbjct: 761 TKLIAPLTPHIAEEMWHMLGHDSMLANAAWPVADPALAADDEVE 804


>gi|62185247|ref|YP_220032.1| isoleucyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312597|sp|Q5L5L0|SYI_CHLAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|62148314|emb|CAH64081.1| isoleucyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 1043

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/489 (15%), Positives = 155/489 (31%), Gaps = 43/489 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDF 94
           F       V      D HG    +  +  G   K       ++ ++             +
Sbjct: 333 FFVCKEHHVPMVCPVDNHGCFTEEIPEYQGQYIKSCDKGIIKSLKNQGKVFYHGTVVHRY 392

Query: 95  I---RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +  +    D      K  +     +++  +    E  +    
Sbjct: 393 PFCWRTDTPLIYKTVNSWFISVEKIKDKMLQANKKIHWVPEHIKEGRFGKWLEGARDWAI 452

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +                 +     I  +E   ++     S L   
Sbjct: 453 SRNRYWGTPIPVWKSK-----------------DGDILVIGSVEELEKLTGEKVSDLHCH 495

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            + +   +   K      Y+   W D+         Y           +PAD    G D 
Sbjct: 496 FVDQLKIEKDGKSFHRVPYVFDCWFDSGAMPYAQNHYPFENQKETESGFPADFIAEGLDQ 555

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+ +   +  L         + +   +   G K+SK L N   P+ ++   G DAL
Sbjct: 556 TRGWFYTLTVISAALFDQPVFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADAL 615

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           R +L+  +    +D  +   G++  +   L      L        L  +D          
Sbjct: 616 RLYLLDSVVVKAEDLRFSDKGVESVLKQVLLPLTNVLSFFKTYTDLYGFDANNYDKEEIS 675

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKT 439
           ++E D  ILS    V+ ++RE+M +  ++ A+   ++ + ++ + Y     ++ WE   T
Sbjct: 676 YSEIDRWILSNLYTVVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT 735

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            PDR         EV+     ++  F+P ++  I+  +   +     +S+     P   L
Sbjct: 736 -PDR-RAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIKTEN---SLESVHLCDFPYIDL 790

Query: 500 HKTFDPIFP 508
            K    +FP
Sbjct: 791 AK----VFP 795



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ RF  +DG  V    G D HG  +    +      T  
Sbjct: 48  PPFATGLPHYGHLLAGTIKDVVGRFATMDGYYVPRRFGWDCHGVPVEYEVEKSLNLTTPG 107

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
                 V + +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 108 AIEDFGVAKFNEECRKIVFRYVDEWEHYIYRVGRWVDFSATWKTMDASFMESVWWVFRSL 167

Query: 114 SDKGDIYK 121
            D+G +Y+
Sbjct: 168 YDQGLVYE 175


>gi|302776862|ref|XP_002971572.1| hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]
 gi|300160704|gb|EFJ27321.1| hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]
          Length = 960

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 72/431 (16%), Positives = 134/431 (31%), Gaps = 70/431 (16%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            S  GD+ +      + +  +                       +   + E  +FR    
Sbjct: 362 CSRTGDVVEPMIKPQWYVSCKDIAAKACNAVRTKEL-------EIIPSQFEDTWFRWLEN 414

Query: 173 QDKLLSYYESHPEFILPIERR-------NEVISFVKSGLKDLSLSRKTF--------DWG 217
                   +      +P            E+ ++    +   S +               
Sbjct: 415 IRDWCVSRQLWWGHQIPAWYCTFEGDELKEMGAYNDHWIVARSETEARVAAEEKFSGKKI 474

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I    DP  ++  W  +     +  G+ +     +A F+P  L   G DIL F    +  
Sbjct: 475 ISFEQDPD-VLDTWFSSGLFPFSVLGWPEATKDLQA-FYPTTLLETGHDILFFWVARMVM 532

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEV-------------- 320
               L+  +P  K++F H  +    G K+SKSLGNVIDP++VI  +              
Sbjct: 533 MGIQLTGEVPF-KQIFLHAMVRDAHGRKMSKSLGNVIDPLDVIHGITLDGLKAKLSQGNL 591

Query: 321 -----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+ LV   A  ++   D   +         N 
Sbjct: 592 DPAEYKTALAGLQSDFPEGIPVCGADALRFALVNYTAQSENINLDVQRVAG--YRYWCNK 649

Query: 358 IGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           + N +  ++  +  ++             S + ILS  +  +  +  +M+   +  A + 
Sbjct: 650 LWNAIRFAMLNLGDNFIPSEELNISELPWSCKWILSALNGTVAAVDGHMEKYDLSAASSA 709

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + S       D + +  KP   K  + D            +     LL  F+P +  +++
Sbjct: 710 IYSWWQYDLCDVFIELTKPTLSKGDSEDAKKLTRDTLWVCLENGLRLLHPFMPFVTEELW 769

Query: 475 DILFVADENRC 485
             L  A E   
Sbjct: 770 QRLPRAQEENS 780



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 48/166 (28%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K  +           HIGHA    + D L R+ R+ G + L+  G D  G      
Sbjct: 30  SQKPKFVMVIPPPNVTGVLHIGHALMCAVEDTLTRWRRMKGYETLWVPGVDHAGISTQVV 89

Query: 62  AQNAGVTTKVFV-------------DQNSRNF--------RDMADVLDISYDDFIRTTEK 100
            +   +  K                               R M   +D S + F  T ++
Sbjct: 90  VEKKIMREKGLTRHDVGREDFVKEVWSWKEQHGTSIFSQLRKMGASVDWSRECF--TMDE 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                    + +    G +Y+      +        +D EV    D
Sbjct: 148 PRCKAVVEAFVRFHKDGLLYRDNRLVNWDCVLRTAISDIEVVDYID 193


>gi|291459962|ref|ZP_06599352.1| isoleucine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291417303|gb|EFE91022.1| isoleucine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 1097

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 120/401 (29%), Gaps = 8/401 (1%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           FIR T  +              +            +++D     D       +     + 
Sbjct: 427 FIRMTAVKEKLVQNNSTVHWYPESIGKGRFGDWIENVQDWGISRDRYWGTPLNIWQCESC 486

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +            + + Y++ L        +         E I   K  +  +  S   
Sbjct: 487 GHQDAVGSIRELMEKSTNYRELLSELKAKGEKGYSSDYVGYEHIELHKPYVDQIECS--C 544

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G ++   P+ ++  W D+         Y        +  +PA       D     F+
Sbjct: 545 PHCGGRMKRVPE-VIDCWFDSGAMPYAQHHYPFENKELFSSQFPAQFICEAVDQTRGWFY 603

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++   + +L    P    +         G+K+SKS GN +DP+E +   G DA+R+F   
Sbjct: 604 SLLAESTILFDRAPYENVLVLGHVQDENGQKMSKSKGNAVDPMEALRCHGADAIRWFFYT 663

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDES 389
             A      +    + +     L+    +     +   +  +D              D  
Sbjct: 664 NSAPWLPNRFHDKAVVEGQRKFLSTLWNSYAFFVLYANIDHFDPKSFSLDYEGLGVMDRW 723

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           +LS  +  +  + + +    I  A + + S V ++ + Y    +     K          
Sbjct: 724 LLSRLNSTVLAVDQRLSEFRIPEAASALQSFVEDMSNWYVRRSRERFWAKGLEQDKINAY 783

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 +  ++ L    VP +   I+  L  + +     S+
Sbjct: 784 ETLYTALVTVSKLAAPMVPFITESIYRNLVSSIDESAPSSV 824



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 19/152 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT---- 68
               N +PHIGH       D++ R+H + G  V    G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVETRAFKDMIPRYHAMKGRMVPRKAGWDTHGLPVELEVEKKIGINGKE 106

Query: 69  -------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    + D +  +      D    T      ++     K+I
Sbjct: 107 QIESYGVAPFIDLCKENVWKYKGMWEDFSYKVGFWADMDHPYVTYHDDFIESEWWALKEI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
             K  +YKG     Y  R     +  EV +G 
Sbjct: 167 WKKKLLYKGFKVVPYCPRCGTPLSSHEVAQGY 198


>gi|242823854|ref|XP_002488143.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218713064|gb|EED12489.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1000

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVL+RF+R+ G DVL   G D  G     AA
Sbjct: 92  DRPKSYILSMFPYPSGTMHMGHLRVYTISDVLSRFYRMRGHDVLHPIGWDAFGLPAENAA 151

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  QN    ++        +D    + T     +   + ++  + +KG  Y
Sbjct: 152 IERGVQPAKWTAQNIERMKEQLRSFGPGFDWERELMTCSPEFYKHTQRIFLMLYEKGLAY 211

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++A++++LL   
Sbjct: 212 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLKLKQWFFRITAFKEELLKDL 268



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 35/207 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N IDP+  +++ G D  R  ++      +   +D+  +   +R    +   +
Sbjct: 704 EKMSKSKHNGIDPMICVDKYGADTTRAHVLFSAPIAEVLEWDEAKIVGIERWFGRMWKLV 763

Query: 359 GNLVSRSVSMILKDYD-------------GMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +  +    M     +               +P     +++D   L      +  +   +
Sbjct: 764 SDAATTLSQMKSGGVELTIENIQNQPHAFPKLPNLINLSDADIEALLATHETIVSVTNCI 823

Query: 406 QN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +     ++  ++ +  L + +              TNP+       +    I  L  LL 
Sbjct: 824 EKNPYALNTVISDLTKLTNTL-------SSSRSSSTNPE-------ILYTCISSLLRLLA 869

Query: 464 AFVPKLANKIFDILFVADENRCFQSLD 490
              P L ++ ++IL     +R  +S D
Sbjct: 870 PIAPALTSETWEILH----SRILESAD 892


>gi|216263501|ref|ZP_03435496.1| isoleucyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980345|gb|EEC21166.1| isoleucyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 1042

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+  Y   Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L+ LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELESLSGQKIEDLHKDKVDKITWPSK 506

Query: 220 IPDD---PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFTNESNFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  +      + +   +   G K+SKS  N  DP+EVI   G DALR +L+    
Sbjct: 567 ILGVSLFESTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K               D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFQPPKNLNLVKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNNEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D       +++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENLINKTIE 799



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           MK+RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MKQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIILRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDINFMESVWWVFKSLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|28871927|ref|NP_794546.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|32130171|sp|Q87VX3|SYL_PSESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28855180|gb|AAO58241.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 868

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 115/396 (29%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  +       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVILPEDVVPDGAGSPLARMPQFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++              + R   +                A T+ 
Sbjct: 655 MFASPPDMSLEWSDSGVEGSH---------RFLRRVWRLAQAHVGQGASGSLDIAALTDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKAVRRSIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  + +LL    P ++++++  L   +
Sbjct: 757 ----LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|255931483|ref|XP_002557298.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581917|emb|CAP80055.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 969

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K YI +   YP+   H+GH     I+DV++RF+++ G DVL   G D  G     A
Sbjct: 71  TQKPKSYILSMFPYPSGTLHMGHLRVYTISDVISRFYKMRGHDVLHPMGWDAFGLPAENA 130

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N    ++       +  +D  + T     ++  + ++  +  K   
Sbjct: 131 AIERGIDPAAWTQENILKMKEQLGCISAEFDWDRELATCSPDFYEHTQRIFLMLYQKNLA 190

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V   A+G  + +    V+ +  + +FF+++ +++ LL  
Sbjct: 191 YQAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEKLNLKQWFFKITDFKEALLKD 247

Query: 180 Y 180
            
Sbjct: 248 L 248



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 118/398 (29%), Gaps = 94/398 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK--------SGLKDLS 208
           V+      +      Y    +          +P+  ++  +   K             L 
Sbjct: 472 VESWRLRDWLISRQRYWGAPIPIIHCEDCGPVPVPDKDLPVKLPKIEGEWLKGKKGNPLE 531

Query: 209 LSRKTFDWGIKIPDDP----QYIMYVWIDALTNYLTTT--GYLDNPDGSKAKFWPADLHV 262
            S +         + P       M  ++D  + Y              S A   P D+++
Sbjct: 532 SSEEWLHTECPSCNGPARRDTDTMDTFVD-SSWYFLRFLDSANKEAPFSPAAMQPVDVYI 590

Query: 263 IGKDILRFHAIY-------------WPAFLLSANLPLPKKVFSHGFI------------- 296
            G +    H +Y              PA   +A     K + S G +             
Sbjct: 591 GGVEHAILHLLYARFIYKFLSQSELLPASNSAAPAEPFKILLSQGMVHGKTFSEPSTGRF 650

Query: 297 --------------LHKG---------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                         L KG         EK+SKS  N +DP     + G DA R  ++   
Sbjct: 651 LLPSEVDLTNPDKPLIKGTQVAPNISFEKMSKSKYNGVDPTTTTSKYGADATRAHILFSA 710

Query: 334 ACGKDGFYDKDGL--KKRVNADLANGIGNL------VSRSVSMI-LKDYDGMIPTPG--- 381
              +   +D+  +   +R    L   I +        S SVS   LK    + P P    
Sbjct: 711 PVSEVLEWDEAKIVGVERWFGRLWKLIQDTQQTLTDASFSVSEADLKSSTHVAPLPSSLQ 770

Query: 382 AFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             ++SD   +      +  +   +++    ++  ++ +  L +             L  T
Sbjct: 771 DLSDSDADAVLATHNTIASVTTCIESNPYGLNTVISDLTKLTN------------TLAST 818

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                ++   +    +  L  LL    P LA++ ++IL
Sbjct: 819 P----ASSPLILYLCVSSLLRLLAPIAPALASESWEIL 852


>gi|313679367|ref|YP_004057106.1| leucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152082|gb|ADR35933.1| leucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 876

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 85/208 (40%), Gaps = 8/208 (3%)

Query: 1   MKERE---KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           MK RE   K Y+     YP+   H+GH     + D LARF +  G  VL   G D  G  
Sbjct: 23  MKAREEGAKYYVLEMFPYPSGDLHMGHLKNYTMGDALARFKKQQGYSVLHPMGWDAFGLP 82

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISD 115
              AA   G     +   N    ++  +++ I   +D  + T    ++   + ++ K+ +
Sbjct: 83  AENAALKFGKHPADWTFDNIAKAKESLNLMGILYDWDREVTTCTPDYYRWNQWIFIKMYE 142

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G +Y+      +  + +    +++V    +G+ +  +   V+    E ++ +++AY D+
Sbjct: 143 AGLVYRAGGLVNWCPKCQTVLANEQV---VEGRCWRHEDTLVEKKNLEQWYLKITAYADR 199

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSG 203
           LL   +    +   ++           G
Sbjct: 200 LLDDLDKLEHWPEKVKAMQRAWIGRSEG 227



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 79/191 (41%), Gaps = 31/191 (16%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGN +     + E G D  R  ++      K+  + ++G++         G    +
Sbjct: 636 MSKSLGNGVMVGPFVREQGADIARVTILFAAPPEKEMVWTEEGVQ---------GAWRFL 686

Query: 363 SRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +R    +++D + +   P AF  +     D+++    ++ ++++ E+++    + A+A +
Sbjct: 687 NRVWRRVVEDEEALRQAPEAFDPARLEGADKTLYRKLNQTIKKVTEDVEGLRFNTAIAAL 746

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + +++ +               +  + S    V    +     LL  F P +A +++   
Sbjct: 747 MEMLNALY--------------DFRKTSEANAVYKNAVLGYLQLLAPFAPHIAEELWHRF 792

Query: 478 FVADENRCFQS 488
               EN  F +
Sbjct: 793 N---ENSVFDA 800


>gi|146279165|ref|YP_001169324.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166231637|sp|A4WXA5|SYL_RHOS5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145557406|gb|ABP72019.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 873

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA
Sbjct: 30  SRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGYSVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N  + R     L +S D      T +  ++   + ++  + + G IY
Sbjct: 90  MERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMFIDMLEAGLIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G         + PV+  E   +FFR+S Y  +LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVIDGKG----WRSNAPVERRELTQWFFRISDYAGELLEAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +   ++   +            GL+
Sbjct: 206 DRLKDWPEKVRLMQANWIGQSRGLQ 230



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 73/177 (41%), Gaps = 30/177 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I + G D  R+F++ +    +D  +   G +              
Sbjct: 645 KMSKSKKNVVDPMNIISQFGADTARWFVMSDSPPERDVEWTASGAEAA---------FKH 695

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R   +     D +    GA T  D ++    ++ + E+ + ++    ++A+A++    
Sbjct: 696 LGRVWRLA----DEIARAEGAPTAEDVALDRATAKAIAEVTQGIEGFAFNKAIAKLYEFT 751

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + + R                R +         +R +A L+   VP LA +++ +L 
Sbjct: 752 NTLSR--------SGAGAEAKRRA---------MRTMAQLMSPMVPHLAEEVWSMLG 791


>gi|297626062|ref|YP_003687825.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921827|emb|CBL56387.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 842

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R++ Y+     YP+   H+GHA    + DVLAR  R+ G +V+   G D  G     AA
Sbjct: 48  KRQRRYVLDMFPYPSGDLHMGHAEAYAMGDVLARSWRMQGFNVMHPIGWDSFGLPAENAA 107

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N    +       +S D    + T+++ ++   + L+ +   KG  Y
Sbjct: 108 IKNNEHPARWTYENIATQKKSFQRYGLSLDWSRELHTSDEEYYHWTQWLFIQFFKKGLAY 167

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D+    +++V +G            V   E + ++FR++ Y  +LL   
Sbjct: 168 QKDGYVNWCPKDQTVLANEQVKEG----RCERCGTLVTKRELKQWYFRITEYAQRLLDD- 222

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            +  E   P        +++               + I   D+P  +     D L
Sbjct: 223 MAQLEGKWPERVLAMQRNWIGRSEGAW------VKFHIDGRDEPVTVFTTRPDTL 271



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 108/307 (35%), Gaps = 34/307 (11%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
             S      G     D    M  ++D+      Y +               W P D ++ 
Sbjct: 496 WKSVTCPVCGKPAERDTD-TMDTFVDSSWYFFRYCSPHDDQGPFRAEDVARWAPVDQYIG 554

Query: 264 GKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y   F        +   +    ++ + G ++++G+ +SKSLGN ++  E 
Sbjct: 555 GAEHATMHLLYARFFTKVLKDLGMIDFVEPFTRLLNQGQVINQGKAMSKSLGNGVNLGEQ 614

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ GVDA+R  +V      +D   D   L  + +         L     S         
Sbjct: 615 LDKYGVDAVRLTVVFAGPPDEDI--DWADLSPKSSLRFLQRAHRLAGEVTS--------- 663

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD-AQKPWE 435
            P        D  +     + + EI + +     + A+A+++ LV+   +  D    P  
Sbjct: 664 -PLGADPASGDRPLRRATHKAISEITDLLAAGRFNVAIARIMELVNATRKTVDGHNAPNS 722

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
              ++            E +  +A  L  F P ++ +++++L  A    +  + + D  L
Sbjct: 723 NAGSDDPAVR-------EAVEFIAQALSLFAPYVSEEMWEVLGHAPSIADSSWPTADPAL 775

Query: 494 KPGFMLH 500
                + 
Sbjct: 776 LAAEEVT 782


>gi|225011521|ref|ZP_03701959.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004024|gb|EEG41996.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 876

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 129/375 (34%), Gaps = 57/375 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++    +  ++      +  L  E+           ++D ++SR+   W
Sbjct: 350 IEPRLSDQWFLKMEDLAEPAINAVLKSDDIALLPEKFKNTYRHWMENIRDWNISRQ-LWW 408

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         + ++  W  +    
Sbjct: 409 GQRIPAYYFGTGVEDFVVALTPEEALEAAQKKSGNQLLKQEDLRQDEDVLDTWFSSWLWP 468

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           +T    + NP+      ++P    V G DIL F    +    +      P      +   
Sbjct: 469 ITVFDGIRNPENEDINYYYPTQDLVTGPDILFFWVARMIVSGYEYRGQKPFSNVYLTGLV 528

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              KG K+SK LGN  D +++IE  G DA+R  L+   A G D  +D+   ++  N   A
Sbjct: 529 RDEKGRKMSKQLGNSPDALKLIENYGADAVRVGLMLSSAAGNDLLFDESLCQQGKN--FA 586

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N           + D       A TE+ +   +  ++ +  + EN +   I  AL 
Sbjct: 587 NKIWNAYRLIEGW---EIDKTNHPTEAATEALDWYQNHFNKTIGWVDENFEKYRISDALM 643

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLAN 471
            +  L+       D    W L+   P+    +   T      +      LL  F+P L  
Sbjct: 644 TIYKLIW------DDFCSWLLELVKPEYGKPIDRYTHTRIVGLFENNLRLLHPFMPFLTE 697

Query: 472 KIFDILFVADENRCF 486
           +++  +   + N+  
Sbjct: 698 ELWHFISPRETNQAL 712



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE   I           H+GH     + D++ R  R+ G +  +  GTD          
Sbjct: 32  DREPYTIVIPPPNVTGVLHMGHMLNNSLQDIIIRRARMRGYNACWVPGTDHASIATEAKV 91

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  +      +    L  S  +D    T +    +
Sbjct: 92  VAKLKAEGIDKSSLSREAFLEYAWEWTHEYGGVILEQLKKLGCSCDWDRTKFTLDPEMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +   ++  + +KG IY+G     +    +   +D+EV               V+  EE+
Sbjct: 152 SVLRVFIDLYNKGLIYRGFRMVNWDPEAQTTLSDEEVIYEEKSGNLYHIAYQVEGSEEQ 210


>gi|148658611|ref|YP_001278816.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189083142|sp|A5V1W3|SYL_ROSS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148570721|gb|ABQ92866.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + YI     YP+   HIGH    +I D L R++ + G DVL   G D  G     AA  
Sbjct: 40  PRRYILEMFPYPSGDLHIGHLKNYVIGDALTRYYVIRGYDVLHPFGWDAFGLPAENAAIK 99

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G   + +   N    +   ++  I YD    + T    ++   + L+  +  KG  Y+ 
Sbjct: 100 YGRHPREWTYSNIAESKKSLEIAGIMYDWSREVTTCNPDYYRWNQWLFLLLYRKGLAYRA 159

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V   A+G+ + +    V+  E E +FFR++AY ++LL+  + 
Sbjct: 160 KATVNWDPVDQTVLANEQV--DAEGRSWRSGAK-VEKRELEQWFFRITAYAERLLNDLDK 216

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   ++           G
Sbjct: 217 LDRWPENVKTMQRNWIGRSEG 237



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 66/196 (33%), Gaps = 29/196 (14%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN I     + + G D  R  ++          +  +G+          G    +
Sbjct: 664 MSKSAGNGIPVGPFVRQYGSDVARIVVLFAAPPENSMEWTDEGV---------AGAQRFL 714

Query: 363 SRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +R V++   D D +          A    D ++       ++++  + +    + A+A +
Sbjct: 715 NRIVALFGPDRDEIAAMVRSGNGAAPEGEDRALYRKLHETIRKVTLDTEQFRFNTAIAAL 774

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L++E  RY                   V  V  +     A LL  F P LA ++    
Sbjct: 775 MELLNEASRY-------------RAEVGRVTPVFAQTAATFARLLSPFAPHLAEEVHSWC 821

Query: 478 FVADE--NRCFQSLDQ 491
                  +  +   D+
Sbjct: 822 GGTGSVYDAGWPEWDE 837


>gi|166155115|ref|YP_001653370.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|259511500|sp|B0BB05|SYI_CHLTB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|165931103|emb|CAP06667.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 1036

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    +L + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLLGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P ++  ++  L    +   
Sbjct: 751 IAPFIPFISEDMYQQLRGETDPES 774



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 90/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +     A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELGAFRILPADFIEESEGTGIVHM 321


>gi|111115668|ref|YP_710286.1| isoleucyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145616|sp|Q0SM18|SYI_BORAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110890942|gb|ABH02110.1| isoleucyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 1042

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+  Y   Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L+ LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELESLSGQKIEDLHKDKVDKITWPSK 506

Query: 220 IPDD---PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFTNESNFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  +      + +   +   G K+SKS  N  DP+EVI   G DALR +L+    
Sbjct: 567 ILGVSLFESTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K               D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFQPPKNLNLVKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNNEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D       +++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENLINKTIE 799



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           MK+RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MKQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMRGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIILRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDINFMESVWWVFKSLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|91774447|ref|YP_544203.1| valyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91708434|gb|ABE48362.1| valyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 943

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 120/375 (32%), Gaps = 59/375 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H       +     ++  ++  K L+ +     
Sbjct: 400 PENWVNTYNQWLNNIQDWCISRQLWWGHQIPAWYSDDGKVYVAHDEAEAKQLAANDGYQG 459

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHVIGKDILRF 270
               +  D   ++  W  +     +T  +  + +  KA     +F P+ + V G DI+ F
Sbjct: 460 H---LKRDED-VLDTWYSSALWPFSTLDWTGDEEKDKANLALQQFLPSSVLVTGFDIIFF 515

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------- 319
               +      ++  +P             +G+K+SKS GNV+DPI++I+          
Sbjct: 516 WVARMVMMTKHITGKIPFKDVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGIGIEELVKK 575

Query: 320 ----------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                                        G DALR+      + G+D  +D    +    
Sbjct: 576 RTTGLMNPKQAEQIEKRTRKEFPEGIPAFGTDALRFTFASLASPGRDIKFDLQRCEG--Y 633

Query: 352 ADLANGIGNLVSRSVSMI------LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +  N + N     +         L+D          F+++D  I+S+  R   +I    
Sbjct: 634 RNFCNKLWNAARFVLMNTQGKDCGLEDCKTQPEGYLDFSQADRWIVSLLQRTEADIERGF 693

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
                      +   V +   D Y +  K  +L+     +        + V+  +  L  
Sbjct: 694 AEYRFDNVAQAIYKFVWDEYCDWYLELAKV-QLQNGGEAQQRATRRTLLRVLETILRLAH 752

Query: 464 AFVPKLANKIFDILF 478
             +P +  +I+ I+ 
Sbjct: 753 PLMPFITEEIWQIVG 767



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 23/175 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            +++   I           H+GH +   I D L R+HR+ G + L+  GTD  G      
Sbjct: 41  SKQDNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGANTLWQPGTDHAGIATQIV 100

Query: 60  -----------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K +     ++  R +    D S + F  T ++ 
Sbjct: 101 VERQLDAQGISRHDLGREKFLEKVWEWKEYSGGSITKQMRRLGTSPDWSRERF--TMDEG 158

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHN 155
              T    + ++ ++G IY+G     +  +     +D EV  +  DG  ++ ++ 
Sbjct: 159 LSRTVTETFVRLYNEGLIYRGKRLVNWDPKLHTAVSDLEVISEEEDGHLWHIRYT 213


>gi|12045191|ref|NP_073002.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351181|sp|P47576|SYV_MYCGE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3844913|gb|AAC71557.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078837|gb|ABY79455.1| valyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 837

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 140/376 (37%), Gaps = 52/376 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  + +F  L   +D                +R N+ +S   + LK   +SR+   W
Sbjct: 354 VEPMLSKQWFVDLPKLKDH----LYLKKYPDFIPKRFNKQVSNWLNKLKPWCISRQ-LIW 408

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G KI                           + ++  W  +    L    +  +    + 
Sbjct: 409 GHKIPVWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSSLWPLICLNWEQDDSFHE- 467

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
                +L V G DIL F    + + +F  +  LP    +        +  K+SKSL N I
Sbjct: 468 ----TELLVTGYDILFFWVLRMLFNSFFETKKLPFKTVLIHGLVRDEQNRKMSKSLNNGI 523

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+++I   G DA+R FL      G D  + +  +K   N    N + N+    +   L+
Sbjct: 524 DPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWN--FLNKLWNVTKFVIQ--LE 579

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +   +       + S+  IL+   +V+Q+I + +    +  A   ++  V +   + + +
Sbjct: 580 NDQEISYDLDKLSLSETWILAKLDKVIQKITKLLDKFQLALANQILVKFVWDDFCNTFIE 639

Query: 430 AQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           A       K  P++    + Y    V+  +AILL   VP L+ +I+        N+    
Sbjct: 640 A------IKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIYQQFN----NKSVMQ 689

Query: 489 LDQRLKPGFMLHKTFD 504
               L     + K FD
Sbjct: 690 ATWPLATKIKIPKLFD 705



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 25/152 (16%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K++   + +  +  PN     HIGHA+E+ I D + RF ++ G  + +  G D  G    
Sbjct: 33  KDKNNSF-TAILPPPNLTGTLHIGHAFEVSITDQIMRFKKMQGFSINWIPGFDHAGIATQ 91

Query: 60  KAAQNAGVTTKV----------------FVDQNSRNFRDMADVLD----ISYDDFIRTTE 99
              +   +                    +    S   ++    L      S   F  T  
Sbjct: 92  TKYEKIALKENQKYFDADDDKKSEMIMNWALNQSEIIKNQLKSLGVCLNWSETKF--TLS 149

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
           ++ +      +K + + G IY+      +  +
Sbjct: 150 EQANKIVNNCFKNLYENGFIYQAYTLVNWDTK 181


>gi|291295744|ref|YP_003507142.1| isoleucyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470703|gb|ADD28122.1| isoleucyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 1093

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 21/287 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNP-----------DGSKAKFWPADLHVIGKDIL--RFHAI 273
           ++ VW D+          + +                 K +PAD      D     F+++
Sbjct: 554 VLDVWFDSGAMPYAQWHLMVDQDGKPLPGFEANFELWRKHFPADYICEAIDQTRGWFYSL 613

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  + LL         +     +  KG K+SKS GNV++P+ + ++ G DA+R++L    
Sbjct: 614 HAISTLLYDQPCFKNVICLGHLVDEKGHKMSKSKGNVVEPLPMFDKYGADAVRWYLFTGS 673

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD----GMIPTPGAFTESDES 389
             G+   +  + L +         + N+    V  +  + D       P      E D  
Sbjct: 674 EPGEQKRFS-ERLVQEAQRGFLGTLWNVYGFFV--LYANLDRPNLNQRPAVQERPEMDRW 730

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           +++   +++Q++   +       A   +   V E+ + Y    +    K  NP    +  
Sbjct: 731 LVARQQQLIQQVTAALDAYDARGAGKALEQFVEELSNWYVRRNRRRFWKNENPADRESAY 790

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
               E +  +  L   F P +A  ++  L  + +    +S+     P
Sbjct: 791 ATLWEALVTVTQLAAPFTPFIAEALWQNLVRSIQPEAPESVHLSDWP 837



 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 19/152 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +P + H       D+  R+  + G  V    G D HG  +  A +         
Sbjct: 52  PPTANGKPAMHHVLARSFKDIFPRYKTMQGYHVTRKGGWDTHGLPVEIAVEKKLGVLGRK 111

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
                         + +V  N  ++    + + +  D      T    + ++   L K++
Sbjct: 112 ALNSQEIAEFTKQCREWVFANIEDWNYFTERMGMWLDLENAYVTYHNSYIESVWNLLKRM 171

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            DKG + +       S R     + +E+  G 
Sbjct: 172 WDKGMVVQDYKVVPLSPRISTTLSQNEIADGY 203


>gi|157964504|ref|YP_001499328.1| leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|166980080|sp|A8F1J5|SYL_RICM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157844280|gb|ABV84781.1| Leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 835

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKKWTYSNIENMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V     + +F +++ Y ++LL+ 
Sbjct: 144 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAIVAKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 127/389 (32%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W   + 
Sbjct: 413 ISRQRFWGCPIPIIHCETCGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVDC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +  I        D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFTRYCNSNAIEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQKYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N +  +     S+               +E ++ +  +    ++ + E+
Sbjct: 645 GIEG--CSRFINKLEYMFKAIDSL----------KDDVNSEINKELNRLVHFTIKLVAED 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 693 IKHFALNRAIARMRELSNAISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L       N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKKRLYNSSFPAFDE 768


>gi|71065144|ref|YP_263871.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123761787|sp|Q4FU71|SYL_PSYA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71038129|gb|AAZ18437.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 921

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 6/210 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I+DVL+R++RL G +V+   G D  G     A
Sbjct: 68  SDKPSRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVMQPMGWDGFGLPAENA 127

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + R    +L +S D      T    ++   + L+ ++  KG +
Sbjct: 128 AIANQTPPAKWTFENIDSMRAQLKLLGLSIDWSREFATCSPEYYQWEQWLFLQLYKKGLV 187

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G   +        V+  +   Y+F ++ Y D+LL  
Sbjct: 188 YKKLATVNWDPIDNTVLANEQVIDGKGWRSGAM----VEKRDIPMYYFNITDYADELLDD 243

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +             +     +S   ++  
Sbjct: 244 LDQLEGHWPSEVITMQRNWIGRSSGMEVHF 273



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 79/203 (38%), Gaps = 27/203 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP   I++ G D +R + +      +   +  D LK   N      +  
Sbjct: 666 EKMSKSKNNGVDPQITIDKYGADTVRLYTLFTAPADQTLEWSDDALKGPYN--FVKKVWR 723

Query: 361 LVSRSV-----------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           + S  +           ++     +         ++  +++       + +I  ++  +L
Sbjct: 724 IASEHMQALTAANLSLDTLNNGTLNNDALNTEGLSKEAKALRRKTHETIGKIDSDLGKRL 783

Query: 410 -IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            ++  ++ ++ L +E+  +          K N ++   V +   E +  L I+L  + P 
Sbjct: 784 ALNTPVSSLMELANELSNF----------KANSEQELQVQH---EALIDLLIMLSVYAPH 830

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           +   + + L +      + ++D+
Sbjct: 831 IGEHLLEQLGLDTVTLNYPAVDE 853


>gi|148926943|ref|ZP_01810620.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845027|gb|EDK22124.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 870

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 147/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEHNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|328541707|ref|YP_004301816.1| Leucyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
 gi|326411459|gb|ADZ68522.1| Leucyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 870

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  RDKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +  +N    R    ++ +S D      T +  ++   + L+ +  + G +Y+
Sbjct: 93  QNKVHPKDWTYENIAAMRGQLKIMGLSLDWSREFATCDVDYYTQQQRLFLRFLEAGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FFR+S Y + LL   +
Sbjct: 153 KKSKVNWDPVDMTVLANEQVIDG----RGWRSGALVEQRELTQWFFRISDYSEDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +    +       GL+  
Sbjct: 209 TLDRWPDKVRLMQKNWIGRSEGLRVR 234



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/402 (13%), Positives = 115/402 (28%), Gaps = 72/402 (17%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +   + +     N      G   Q Y     PV   +  G            L    +
Sbjct: 413 TVTVDGAPQATRQVNYRLRDWGISRQRYWGCPIPVIHCDACGVVPEKDENLPVQLPDDIN 472

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             +   P++R                 S        K   D              +    
Sbjct: 473 FDKPGNPLDRHPTW----------RDCSCPKCGGAAKRETDTMDTFVDSSWYFARFTAPD 522

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL-------PLPKKVFSHGF 295
                   +   + P D ++ G +    H +Y   F  +             K +F+ G 
Sbjct: 523 CDRPTDPAAANAWLPVDQYIGGIEHAILHLLYSRFFTRAMQKVGALDLKEPFKGLFTQGM 582

Query: 296 ILHKG---------------------------------------EKISKSLGNVIDPIEV 316
           + H+                                        EK+SKS  N +DP ++
Sbjct: 583 VTHETYRSADGQWLSPVEVRFEDVDGTRTAVEIATGKPAAIGSIEKMSKSKKNTVDPTDI 642

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE  G D  R+F++ +    +D  + ++G++                R V+ + +  D  
Sbjct: 643 IETYGADTARWFMLSDSPPERDVIWTEEGVQGSWR------FVQRAWRLVAEVAEKTDPR 696

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                    +   +     + +  +  +++    +RA+A++  LV+++ +   A      
Sbjct: 697 AAAVPDMGAAALELRRATHKTIAAVSRDIEGLGFNRAVARIYELVNQIGKVVHAG----- 751

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   +   Y   E    L +L+   +P LA + +  L 
Sbjct: 752 -----LDDADAAYAAREACECLVLLIAPMMPHLAEECWTALG 788


>gi|255994163|ref|ZP_05427298.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993831|gb|EEU03920.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 817

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y+     YP+ + H+GH     I D +AR+  L G +VL   G D  G     A
Sbjct: 30  KNKKKYYVLEMFPYPSGKLHMGHVRNYAIGDAIARYKSLKGFNVLHPIGFDSFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N +        L  SY  D  + T+ K ++   + L+ K+ +KG +
Sbjct: 90  AIKKGVKPDKWTYSNIKEMEVQLRELGFSYDWDREVTTSSKDYYKWTQWLFIKMHEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    +++V  G+         N V       ++ +++ Y  +LL  
Sbjct: 150 YKKENPVNWCTDCQTVLANEQVKDGS----CERCGNEVIKKNLSQWYIKITDYAKRLLDG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +   ++   +++          G
Sbjct: 206 LDDLNDWPSKVKQMQSNWIGESHG 229



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 128/343 (37%), Gaps = 47/343 (13%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKDLSLSRKT 213
                +      Y    +          +P +  N      E I F   G   ++ S   
Sbjct: 413 YRLRDWLISRQRYWGTPIPMIHCGKCGYVPEKEENLPVILPEDIEFTGKGESPINNSESF 472

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
            +    I           M  ++D+      Y          D   A +W   D ++ G 
Sbjct: 473 VNTTCPICKGKAKRETDTMDTFVDSSWYFLRYTDPHNQDLPIDRKTADYWMNVDQYIGGI 532

Query: 266 DILRFHAIYWPAFLLSA-------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +    H +Y   F +         +    K + + G +L  G K+SKS+GN+++P ++I+
Sbjct: 533 EHAILHLMYARFFQMFMKDIGLTKDEVPFKNLLTQGMVLKNGTKMSKSIGNIVEPSDIIK 592

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D  R F++ +    +D  +  +G+               ++R   + L+  D    
Sbjct: 593 TYGADTARLFVLFQAPPERDLEWSDEGVVGS---------FKFLNRVYRLALEYKDVKDV 643

Query: 379 TPGAFT---ESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPW 434
           +    +   E D+ ++S     ++++  ++      + A++ V+ LV+ + +Y       
Sbjct: 644 SLEELSASCEDDKKLISKIHMTIKKVDSDLDKHFGFNTAISAVMELVNMIYKY------- 696

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              K N      ++   V VI   ++LL  FVP ++++I ++L
Sbjct: 697 ---KENTGADKELIKCAVSVI---SVLLMPFVPHISSEIGNML 733


>gi|50732866|ref|XP_418801.1| PREDICTED: similar to KIAA0028 [Gallus gallus]
          Length = 911

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ VL   G D  G     A
Sbjct: 86  KSRPKFYVLSMFPYPSGKLHMGHVRVYTISDTVARFQKMRGMQVLNPMGWDAFGLPAENA 145

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N ++ R+  D L +S+  +  I T    ++   + L+ K+ + G +
Sbjct: 146 AIEHGLHPASWTQSNIQHMREQFDALGLSFTWEREITTCLPEYYKWTQYLFLKLFESGMV 205

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V    D          V+    + +F + +AY   +   
Sbjct: 206 YQKEALVNWDPVDQTVLANEQV---DDNGCSWRSGAKVEQKYLKQWFIKTTAYAKAMFDA 262

Query: 180 YESHPEFILPIERRNEVISFV 200
               PE+    E +   I   
Sbjct: 263 LSDLPEWYGIKEMQANWIGDC 283



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 112/336 (33%), Gaps = 74/336 (22%)

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADL 260
               + +  R   +   +I     ++   W      Y          +   A +W P DL
Sbjct: 506 PEWVNCACPRCKAEARREIDTMDTFVDSAW--YYLRYTDPHNTDRPFNCDLADYWMPVDL 563

Query: 261 HVIGKDILRFHAIYWPAFLLSA--------NLPLPK------------------------ 288
           ++ GK+    H  Y   F              P  K                        
Sbjct: 564 YIGGKEHAVMHLFYARFFSHFCHDLKMTKHKEPFHKLLVQGLIKNQTFRLRTTGQYLKRE 623

Query: 289 ----------KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                      + S   +    EK+SKS  N IDP E+++E G+D +R +++      +D
Sbjct: 624 EIDLTGTEPVHLKSGEKVQVTWEKMSKSKHNGIDPEELMKEYGIDTIRLYILFAAPPEQD 683

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAFTESDES----I 390
             +D          D   G+    +R  +++ K         +P P   ++  ++    I
Sbjct: 684 ILWDTK-------TDAMPGVQRWQTRLWTLVTKLIEARTSETMPNPEVLSKKQKAEARRI 736

Query: 391 LSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
               + V+ E+ E      L + A+++++SL + +      Q  W L   + +       
Sbjct: 737 WEQKNLVISEVTEYFTKDHLFNAAISRLMSLSNVL-----HQASWPLVLHSAEYEDA--- 788

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                +  L I++    P +A++++  L   +   C
Sbjct: 789 -----LATLCIMVAPMAPHIASEMWKGLAHIENKLC 819


>gi|198283967|ref|YP_002220288.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218668001|ref|YP_002426603.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248488|gb|ACH84081.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218520214|gb|ACK80800.1| valyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 938

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 128/406 (31%), Gaps = 104/406 (25%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++ R++   +  +   E      +P    ++        ++D  +SR+   W
Sbjct: 364 IEPYLTDQWYVRVAPLAEPAIRAVEEGRIRFVPENW-SKTYFDWMQRIEDWCISRQ-LWW 421

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTGY 244
           G  I     P                                ++  W  +     TT G+
Sbjct: 422 GHQIPAWYGPDGKIFVARREEEAQSEAVRHYGMPVVLERDPDVLDTWFSSALWPFTTLGW 481

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------ 298
            +      A+F+P  + V G DI+ F    W A ++   L     V  H   +H      
Sbjct: 482 PEKTS-DLAQFYPTSVLVTGFDIIFF----WVARMIMMGLRFMDDVPFHEVYVHGLVRDA 536

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
           +G+K+SKS GNV+DPI++I+                                       G
Sbjct: 537 EGQKMSKSKGNVLDPIDLIDGISLEDLVAKRTRGLMQPQMAAKIEKATRKEFADGIPAFG 596

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+        G+D  +D   ++   N +  N + N  SR   M         PTP 
Sbjct: 597 TDALRFTFAALATQGRDIKFDLKRVEG--NRNFCNKLWN-ASRFALM-------QTPTPA 646

Query: 382 AFT------ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
           A          +  I+         +   +       A   +         D Y +  KP
Sbjct: 647 ALEGERELLAPERWIIGRLQHCEAAVNSAIDQYRFADAAHALFQFFWNDYCDWYIELSKP 706

Query: 434 WELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L++  P    +        + V+     L+   +P L  +++  
Sbjct: 707 -VLREGGPFTSAQQCGTRNTLLRVLEAGLRLMHPVMPFLTEELWQR 751



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG- 66
              +  PN     H+GHA++  + D+L R HR+ G   L+  GTD  G       +    
Sbjct: 38  CIMLPPPNVTGTLHMGHAFQDTLMDILTRVHRMRGERTLWQPGTDHAGIATQMLVERQLV 97

Query: 67  -------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                                 +      +R  R +    D S + F  T +        
Sbjct: 98  QEGGDRHQMGRGAFLERVWQWRRESGGHITRQMRRLGASCDWSRERF--TLDSGLSHAVT 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ ++ D+G IY+G     +        +D EV   A+         P+
Sbjct: 156 EVFVRLHDEGLIYRGKRLVNWDPVLRTAVSDLEVISEAEQGSLWHIRYPL 205


>gi|93005396|ref|YP_579833.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92393074|gb|ABE74349.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 934

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 6/210 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I+DVL+R++RL G +V+   G D  G     A
Sbjct: 86  SDKPSRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVMQPMGWDGFGLPAENA 145

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + R    +L +S D      T    ++   + L+ ++  KG +
Sbjct: 146 AIANQTPPAKWTFENIDSMRAQLKLLGLSIDWSREFATCSPEYYQWEQWLFLQLYKKGLV 205

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G   +        V+  +   Y+F ++ Y D+LL  
Sbjct: 206 YKKLATVNWDPVDNTVLANEQVIDGKGWRSGAM----VEKRDIPMYYFNITDYADELLDD 261

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +             +     +S   ++  
Sbjct: 262 LDQLEGHWPSEVITMQRNWIGRSSGMEVHF 291



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 79/198 (39%), Gaps = 22/198 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP   I++ G D +R + +      +   +  D LK   N      +  
Sbjct: 684 EKMSKSKNNGVDPQITIDKYGADTVRLYTLFTAPADQTLEWSDDALKGPYN--FVKKVWR 741

Query: 361 LVSRSV------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
           + S  +      ++ L+  +       + ++  +++       + +I  ++  +L ++  
Sbjct: 742 IASEHIQALTDANLSLESLNSDALNTDSLSKEAKALRRKTHETIGKIDSDLGKRLALNTP 801

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ ++ L +E+  +         K ++         V  E +  L I+L  + P +   +
Sbjct: 802 VSSLMELANELSNF---------KASSEQELQ----VQHEALTDLLIMLSVYAPHIGEYL 848

Query: 474 FDILFVADENRCFQSLDQ 491
            + L +      +  +D+
Sbjct: 849 LEQLGLDTVTLNYPMVDE 866


>gi|90021016|ref|YP_526843.1| valyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89950616|gb|ABD80631.1| valyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 922

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 135/395 (34%), Gaps = 82/395 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ +     D+ +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 348 IEPYLTNQWYVKTQPLADEAIKAVEEGDINFVPKQYENMYFSWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +      T G+ +
Sbjct: 406 GHRIPAWYDADGKVYVGRSEDDVRKKHNIAADVELKQDEDVLDTWFSSGLWTFGTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKIS 304
           + D  K    P+ + V G DI+ F         L     +P K V+ HG +   +G+K+S
Sbjct: 466 DTDFLKTFH-PSSVLVTGFDIIFFWVARMIMLTLYFKKEVPFKTVYVHGLVRDSQGQKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALRY
Sbjct: 525 KSKGNVLDPIDLIDGIELETLVAKRTAGMMVPKLREKIEKQTRKEFPDGIAGYGTDALRY 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-- 385
                 + G+D  +D   ++     +  N + N  S  V M  +  D        +T   
Sbjct: 585 TYYSLASTGRDINFDVGRIEG--FRNFCNKLWN-ASNYVLMNTEGQDCGQDGSDDYTLSL 641

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-- 441
           +D  I+S      + +RE M+   +  A   +   + +   D Y +  KP  L   N   
Sbjct: 642 ADRWIVSRLQEAEKAVREGMETYRLDLASQALYDFIWKDYCDWYLELTKP-VLWDDNAST 700

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                     + V+     L    +P +  +I+  
Sbjct: 701 QLKKGTRRTLIRVLETTLRLAHPLMPFITEEIWQR 735



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 24/168 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ------ 63
            I  PN     H+GH ++  I D L R+HR+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHGFQESIMDALIRYHRMKGNNTLWQVGTDHAGIATQMVVERLLDAE 95

Query: 64  --------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                         KV+  +       +R  R +    D S + F  T +   ++  + +
Sbjct: 96  GKSRHDLGREKFIEKVWEWKEESGGNITRQLRRLGASPDWSRERF--TMDDGFYNAVQEV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ +   IY+G     +  +     +D EV    +  +      P+
Sbjct: 154 FVRLYEDELIYRGKRLVNWDPKLHTAISDLEVISEEEKGFMWHFRYPL 201


>gi|88703591|ref|ZP_01101307.1| valyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88702305|gb|EAQ99408.1| valyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 921

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 131/392 (33%), Gaps = 77/392 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++    A     +   ES     +P +  N   ++++  ++D  +SR+   W
Sbjct: 348 IEPYLTQQWYVDAKALAGPAIEAVESGQIEFVPKQWENTYFAWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    DP+  +YV                            W  +     +T G+ +
Sbjct: 406 GHRIPAWFDPEGNIYVGADEASVRAENRLDDSLPLHQDEDVLDTWFSSALWTFSTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + +  K    P  + V G DI+ F    +          +P  +          +G+K+S
Sbjct: 466 DEEMLKRFH-PTSVLVTGFDIIFFWVARMIMMTLHFRGEVPFRQVYVHGLVRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGIDLPTLVEKRTSGLMQPQQAERIREATRSQFPNGINAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTES 386
                 A G+D  +D   ++     +  N I N     +     KD       P     +
Sbjct: 585 TFYSLAATGRDIKFDIGRIEG--FRNFCNKIWNAARFVLMNCEGKDCGADESLPYTLGTA 642

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           +  I S   R L+  R+++ +     A   +   +     D Y +  K     +++P  A
Sbjct: 643 ERWIDSELQRTLERFRKSIADYRFDLASQALYDFIWNEYCDWYLELSKVALRDESDPAVA 702

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +    +  + Q    L   +P +  +I+  
Sbjct: 703 RGIRRTLIRTLEQSLRALHPLMPYITEEIWQN 734



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 24/169 (14%)

Query: 11  TAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ----- 63
             I  PN     H+GH ++  I D L R+HR+ G D L+  GTD  G       +     
Sbjct: 35  VMIPPPNVTGSLHMGHGFQETIIDALVRYHRMAGYDTLWQPGTDHAGIATQMVVERQLAA 94

Query: 64  ---------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
                          K++  +       ++  R +    D S + F  T ++      + 
Sbjct: 95  QGKDRHEMGREAFIEKIWEWKASSGGTITQQLRRLGASPDWSRERF--TMDEGLSAAVQE 152

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++ ++  +G IY+G     +        +D EV    +         P+
Sbjct: 153 VFIRLYREGLIYRGQRLVNWDPAIHTAISDLEVISEEEQGKLWHFRYPL 201


>gi|213962388|ref|ZP_03390651.1| isoleucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955054|gb|EEB66373.1| isoleucyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 1135

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 94/268 (35%), Gaps = 10/268 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y             +PAD    G D     F+ ++
Sbjct: 596 KPMHRETDLIDVWFDSGSMPYAQWHYPFENKDYIENHTAYPADFIAEGVDQTRGWFYTLH 655

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     V +   +   G+K+SK LGN +DP   I E G DA R++++    
Sbjct: 656 AIATSVFNSVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFTTIAEYGADATRWYMISNAN 715

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D +G+ + V       + N  S        D   Y           E D  IL
Sbjct: 716 PWDNLKFDLEGVAE-VRRKFFGTLYNTYSFFALYANTDSFTYAEADIPLAERPEIDRWIL 774

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + +++E+     +    RA   +   V E   + Y    +    K            
Sbjct: 775 SELNTLIKEVDTLYADYEPTRATRAISDFVQENLSNWYVRLSRRRFWKGEYETDKIAAYQ 834

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A L+    P  A++++  L
Sbjct: 835 TLYTCLVTIAKLMAPVAPFYADRLYKDL 862



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 19/160 (11%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
                      N  P I H     I D+  R+    G  V    G D HG  +    +  
Sbjct: 40  PFVFFEGPPSANGVPGIHHVMARSIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGVEKE 99

Query: 66  -----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
                                K  V + +  + D+ + +   +  +D   T + ++ ++ 
Sbjct: 100 LGITKEDIGKKISVEDYNKACKEAVMRYTDIWNDLTEKIGYWVDMEDPYITYKPKYMESV 159

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             L K++ +K  +YKG     YS +     +  E+ +   
Sbjct: 160 WWLLKQLYNKQLLYKGYTIQPYSPKAGTGLSSHELNQPGC 199


>gi|34557968|ref|NP_907783.1| valyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81653436|sp|Q7M8H7|SYV_WOLSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|34483686|emb|CAE10683.1| VALYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 894

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 78/390 (20%), Positives = 139/390 (35%), Gaps = 59/390 (15%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +++ Y    E ++   G+ Y    N V+    + +F +    Q   +    S      P 
Sbjct: 350 QEKGYIEKIEEHENQVGKCYR-CGNVVEPYISKQWFVKKEVAQK-AIERINSGEAAFYPA 407

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI----------------------------PD 222
           + +N   +++K  L+D  +SR+   WG +I                              
Sbjct: 408 QWKNNYNAWMKE-LRDWCISRQ-LWWGHQIPVYYCDCGHEWASETTPSHCPKCQGSQFHQ 465

Query: 223 DPQYIMYVWIDALTNYLTTTGY--------LDNPDGSKAKFWPADLHVIGKDILRFH--A 272
           DP  ++  W  +     +T G+            +    +F+P  L + G DIL F    
Sbjct: 466 DPD-VLDTWFSSALWPFSTLGWGNGEAGKGSWWREEDLQEFYPNSLLITGFDILFFWVAR 524

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +         NLP             KG+K+SKS GNVIDP+E+IE+ G D+ R+ L   
Sbjct: 525 MLMMGEHFLDNLPFKDIYLHALVRDEKGQKMSKSKGNVIDPLELIEKYGCDSTRFTLAIL 584

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G+D       L+   N    N + N  +  +            TP   T     + S
Sbjct: 585 CAQGRDVRLSSQQLEISKN--FTNKLYNAANFLLLNASSFKTLDEITPQ--TPLGRYMAS 640

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYV 450
             S  ++E+R  +     +     +   +     D   +      L K N +     +  
Sbjct: 641 RFSLCVEELRGALDGYRFNDGATVLYRFLWGEFCDWGIE------LSKANKE----AINE 690

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              + R+   LL  ++P ++  ++  L  A
Sbjct: 691 LGAIFREAMKLLHPYMPFISEHLYQKLGGA 720



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   +           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 57  KPNQNFAVMLPPPNVTGSLHIGHALNHTLIDIMTRYKRMDGYKTLWQPGTDHAGIATQNV 116

Query: 62  AQNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +   ++               KV+  +           R +      S   F  T ++ 
Sbjct: 117 VEKRLLSKGIKKEELGREAFLEKVWEWREESGGTILSQMRKLGTSPAWSRTRF--TMDEG 174

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             ++    + K+ ++G I +G Y   +   D A  + +  Y    G+ Y+ ++
Sbjct: 175 LKNSVARAFVKLYEEGYIIRGNYMVNWCTHDGALSDIEVEYDANKGKLYHLRY 227


>gi|86150255|ref|ZP_01068482.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597514|ref|ZP_01100748.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|85839371|gb|EAQ56633.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190106|gb|EAQ94081.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|284926021|gb|ADC28373.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929651|gb|EFV08831.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 870

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 148/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEYNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +   LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNAKNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|284163384|ref|YP_003401663.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284013039|gb|ADB58990.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 1068

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 12/274 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW+D+      T  Y ++      + WPAD  +   D     F +    +       
Sbjct: 529 VFDVWLDSSVASWGTLNYPEDDSR-FDELWPADFILEAHDQTRGWFWSQLGMSTAALGES 587

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     ++  G  +SKS   +IDP E I+  G D +R FL+     G+D  +D D
Sbjct: 588 PYQEVLMHGHALMPDGRAMSKSKDILIDPHEAIDRHGRDVMRMFLLSNNPQGEDMRFDWD 647

Query: 345 GLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT----PGAFTESDESILSVCSRVLQ 399
           G++   N      + N+    +  M L ++D    T           DE +L+       
Sbjct: 648 GMQTMENH--LRTLWNVFRFPLPYMRLDEFDPTATTLEDVDSDLELIDEWVLARLQSTKA 705

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+ E  +++   RAL  +I  V E V R Y  A +     + +            +V+R+
Sbjct: 706 EMTEAFEDRRQDRALDALIEFVVEDVSRFYVQAVRERMWAEEDSGSKRAAYATIYQVLRE 765

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              LL  + P ++ +I+  L   D        D 
Sbjct: 766 SVALLAPYAPFISEEIYGTLTGDDGFDTVHMEDW 799



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E  +      Y +   H+G  +   + DV  RF R+ G DV    G D HG  I   
Sbjct: 38  SDGESFFFVDGPPYTSGSAHMGTTWNKSLKDVYLRFLRMQGYDVTDRPGYDMHGLPIETR 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K + D+     ++      +   +DD  RT E  +
Sbjct: 98  VEERLGFENKKDIEEFGEENFIQECKDYADEQLEGLQEDFQDFGVWMDWDDPYRTVEPEY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +     + K +D+G + KG  S     R E    ++EV  
Sbjct: 158 MEAAWWGFSKAADRGLVEKGHRSISQCPRCETAIANNEVEY 198


>gi|21355409|ref|NP_647932.1| Leucyl-tRNA synthetase [Drosophila melanogaster]
 gi|7292541|gb|AAF47943.1| Leucyl-tRNA synthetase [Drosophila melanogaster]
 gi|19528361|gb|AAL90295.1| LD44376p [Drosophila melanogaster]
          Length = 869

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 5/188 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA
Sbjct: 60  SQDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    + +QN    ++    L  S+D    + T   +++   + L+  +   G  Y
Sbjct: 120 NQRGVEPASWTEQNIAQMKEQLKRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    D++V          A+   V+      +F R SAY  +LL   
Sbjct: 180 QNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLRQWFIRTSAYAKQLLDGL 236

Query: 181 ESHPEFIL 188
           E       
Sbjct: 237 EDPTLRDW 244



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/368 (14%), Positives = 107/368 (29%), Gaps = 70/368 (19%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+      +S         +        G K 
Sbjct: 395 KLKDWLISRQRYWGTPIPIVHCQKCGAVPVPEEQLPVSLPPKDSPKEAFLCDCPKCGEKD 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      ++          KF P DL++ GK+    H  Y  
Sbjct: 455 ARRETDTMDTFVDSSWYYLRYLDAQNSERIFDTALTKKFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFLLSAN--------LPLPKKVFSHGFI-------------------------------- 296
                 +         P  + +     +                                
Sbjct: 515 FINHFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYVPETEVEIVNAKKNQAVLKE 574

Query: 297 -----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                +   EK+SKS  N ++P ++  E G D  R  ++ ++A      +        +N
Sbjct: 575 TKEPVVMTWEKMSKSKLNGVEPSDMFNEYGTDTTRLIILADVAPTSHRNWSSATFPGILN 634

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
                 +     +         D ++PT   F   D  +    +  ++    N +  Q +
Sbjct: 635 WQKRLWLTLQDFQQAREDQTASD-VVPTSEEFLAEDAKLFDARNFYVKGATFNYRHAQQL 693

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA---ILLQAFVP 467
             A++++  L +             L++T       VL    +  R LA   I+L    P
Sbjct: 694 SVAISKMQGLTN------------SLRRTP----KHVLRHGKQFERALAAQIIMLAPMAP 737

Query: 468 KLANKIFD 475
             A++++ 
Sbjct: 738 HFASELWS 745


>gi|57237620|ref|YP_178868.1| valyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819531|sp|Q5HV17|SYV_CAMJR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57166424|gb|AAW35203.1| valyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058229|gb|ADT72558.1| Valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 870

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 148/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEYNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +   LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNAKNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|218562403|ref|YP_002344182.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|12585353|sp|Q9PPE4|SYV_CAMJE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|112360109|emb|CAL34903.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315928297|gb|EFV07613.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 870

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 148/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEYNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +   LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNAKNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +   +T                   + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLTQGIKKEELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|319943191|ref|ZP_08017474.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743733|gb|EFV96137.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 887

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 7/234 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+   H+GH     I DV+ R  R+ G +VL   G D  G     AA 
Sbjct: 35  KGKFYACSMLPYPSGILHMGHVRNYTINDVMYRHLRMSGYNVLMPMGWDAFGLPAENAAL 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N    +     L +S D    + T    ++   + L+ ++ +KG  Y+
Sbjct: 95  KNGVAPAKWTWDNIAYMKQQMQPLGLSIDWSREVATCSPDYYKWNQWLFLRMREKGIAYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V  G           PV+  +   Y+ R++ Y  +LL    
Sbjct: 155 KHGTVNWDPVDQTVLANEQVVDGKG----WRSGAPVEKRDIPMYYLRITDYAGELLKEVT 210

Query: 182 SHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            H E      R  +        G++         + G  I +   Y+     D 
Sbjct: 211 EHLEGWPERVRMMQANWIGRSEGVRFAFEHDIRDEQGQPIDEGRLYVFTTRADT 264



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 118/379 (31%), Gaps = 50/379 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+   D    G   +      +   +++   Y+ R  ++ +        + 
Sbjct: 479 SGNPLNKSEAFLKVDCPCCGKPARRETDTMD--TFIDSSWYYMRYCSHDNNEAMVDARND 536

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D G+   D+P          L        +
Sbjct: 537 YWMPMDQYIGGIEHAVLHLLYARFWTKVMRDMGLVKFDEP-------FKRLLTQGMVLNH 589

Query: 245 LDNPDGSK---AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           +     +K     FWP D+  +             A        L         I + G 
Sbjct: 590 IYQRRTAKGGIEYFWPKDVENVTD-----------AQGRVVGARLKSD---GSEIDYAGI 635

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
             +SKS  N +DP  +IE  G D  R F++      +   +   G++         G   
Sbjct: 636 GTMSKSKNNGVDPTSLIERFGADTARLFVMFASPPEQTLEWSDSGVE---------GASR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + R  +      D +            +E+   +      VL++I+ + + Q  +  ++
Sbjct: 687 FLRRFWAFGHAQRDVVRGAADTVDAAGLSEAWRDLRYEVHTVLKQIQYDYERQQYNTIVS 746

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + L++ +             +     A+       E +  L   L   VP + + ++ 
Sbjct: 747 GAMKLLNAL-----EAA----AQKQAPTAAADAAALREGMSILVRSLYPIVPHIGHALWQ 797

Query: 476 ILFVADENRCFQSLDQRLK 494
            L +       + +D  L 
Sbjct: 798 ALELGRGFEGREIIDAPLP 816


>gi|296437395|gb|ADH19556.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/11074]
          Length = 1041

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|296435535|gb|ADH17709.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|297139894|gb|ADH96652.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 1041

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIECFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|86153201|ref|ZP_01071405.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613655|ref|YP_001000464.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85842927|gb|EAQ60138.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249321|gb|EAQ72281.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 870

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 147/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEHNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|228472882|ref|ZP_04057639.1| isoleucine-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275464|gb|EEK14241.1| isoleucine-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 1138

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 105/282 (37%), Gaps = 14/282 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         K K +PAD    G D     F+ ++
Sbjct: 599 KPMKRESDLIDVWFDSGSMPYAQVHYPFENKDLIDKGKAFPADFIAEGVDQTRGWFYTLH 658

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     + +   +   G+K+SK LGN +DP E +E+ G DA R++++    
Sbjct: 659 AIATSVFDSVAYKNVMSNGLVLDKNGQKMSKRLGNAVDPFETLEKYGADATRWYMISNAN 718

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDES 389
              +  +D +G+++ V       + N  S     +  + DG              E D  
Sbjct: 719 PWDNLKFDVEGIEE-VRRKFFGTLYNTYSFFA--LYANLDGFTYAEAEVPLQKRPEIDRW 775

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS    ++ +++E   +    RA   +   V E   + Y    +    K    +   + 
Sbjct: 776 ILSELHTLIAKVKEAFLDYEPTRATRLISDFVQENLSNWYVRLCRRRFWKGEYEEDKISA 835

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  +  +A L     P   +K++  L  A      +S+
Sbjct: 836 YQTLYTCLEVVAKLSAPVAPFFMDKLYRDLNGATGKDKAESV 877



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 22/208 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E           N  P I H     + D+  RFH   G  V    G D HG  +    
Sbjct: 37  GKEPFIFYEGPPSANGLPGIHHVMARALKDIFCRFHTQLGAQVFRKAGWDTHGLPVELGV 96

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI---SYDDFIRTTEKRH 102
           +                       K  V + +  + ++ + +       D +I T + ++
Sbjct: 97  EKELGITKDDIGKKISVADYNKACKEAVMRYTDIWNNLTEQIGYWVDLNDPYI-TYKPKY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +T   L K++ +KG +YKG     YS +     +  E+ +        +    V     
Sbjct: 156 METVWWLLKQLYNKGLLYKGYTIQPYSPKAGTGLSSHELNQ-PGCYRDVSDTTIVAQFRV 214

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + +  + +                  P 
Sbjct: 215 KNFAPQATKELGNPEGTLYILAWTTTPW 242


>gi|294055708|ref|YP_003549366.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615041|gb|ADE55196.1| valyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 913

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 142/391 (36%), Gaps = 76/391 (19%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    E +F +    ++   +  +   +F    +R  +      +G++D  +SR+   
Sbjct: 356 PIEPRLSEQWFLKYPKVEEAKRAVEKGIIKFH--PDRWKKTYLHWLNGIQDWCISRQ-LW 412

Query: 216 WG--IKIPDDPQY-------------------------------IMYVWIDALTNYLTTT 242
           WG  I +     +                               ++  W  +    +   
Sbjct: 413 WGHRIPVWYKKGFERSELDFSNPDHVHVSIDGPSDPENWEQEADVLDTWASSYLWPMGNL 472

Query: 243 GYLDN---PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP------------ 287
           G+ +        +  ++P    V G DI+ F    W A ++ A L L             
Sbjct: 473 GWPNPTADQQKEQDFWYPTSTLVTGFDIIFF----WVARMIMAGLELFGEDAKELSDEEI 528

Query: 288 ------KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                 K +F HG I   KG K+SKSLGN  DP+++IE+ G D LR+ +      G D  
Sbjct: 529 AKRIPFKNIFIHGLIRDEKGRKMSKSLGNSPDPLDLIEKFGADGLRFGICNIAPTGSDIL 588

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-------GMIPTPGAFTESDESILSV 393
           + +D ++  +  +  N + N  SR   M     D                 ++D  IL  
Sbjct: 589 FSEDRIQ--IGRNFCNKLWN-ASRFRQMSGPMADNSSLESIHARIDQSLLDDTDHWILGR 645

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            + V  E+ +   +  +     Q+         D Y +A K  +LK +  +R   +    
Sbjct: 646 LAEVTAEVEKCFTDYELAPLTHQIYGFFWSDFCDWYVEASK-GKLKGSEAERDHCLAIQD 704

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + V+RQ+  L    +P +  +++  L    E
Sbjct: 705 L-VLRQVLQLANPVIPHITEELWKGLGYGGE 734



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +RE   I           H+GH  +  + D+  R  RL+G  VL+  GTD  G      
Sbjct: 33  TDREPYAIMIPPPNVTGMLHMGHVLDNTLQDIFIRRARLEGKAVLWQPGTDHAGIATQTK 92

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                         F +Q+     +    L  S  +D    T ++ +
Sbjct: 93  VEKQLRAETGQTKYDLGREGFLEKVWEFREQSGGVILNQLRKLGASCDWDRTSFTLDEDY 152

Query: 103 HDTCRILWKKISDKGDIYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                  + K+ ++G IY+      W      A  +++ + K  +G +Y  ++  V+   
Sbjct: 153 SKGVLTAFVKLYERGYIYRGQRMVNWCPATHTAISDEEVIMKPQNGFFYKMRYELVEPDG 212

Query: 162 EEGY 165
           E  +
Sbjct: 213 ERTH 216


>gi|291538047|emb|CBL11158.1| isoleucyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 1063

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 68/462 (14%), Positives = 148/462 (32%), Gaps = 25/462 (5%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    D  G+   +          VFV +         D   + +D        
Sbjct: 347 RKYDLPFVQLVDGKGELTKETPYAG-----VFVKKADPMVLKDLDEKGLLFD------AP 395

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD----GQYYNAQHN 155
           +        W+  +      +  +    + ++D+   N++ V    D    G++ +   N
Sbjct: 396 KFEHEYPHCWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTVNWIPDSIGKGRFGDWLEN 455

Query: 156 PVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SLSRK 212
              W       +   L  ++ +            L     N   + V+     + +++ K
Sbjct: 456 IQDWGISRNRYWGTPLPVWECECGHQECIGSRAELAERSGNPEDAKVELHRPYIDAVTFK 515

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             D G ++   P+ ++  W D+         Y         K +PA       D     F
Sbjct: 516 CPDCGKEMHRVPE-VIDCWFDSGAMPFAQHHYPFENKDVFEKQFPAKFISEAVDQTRGWF 574

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + LL    P    +         G+K+SKS GN +DP + +E  G DA+R++  
Sbjct: 575 YSLMAESTLLFNKAPYENVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWYFY 634

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDE 388
              A      +    +++     +           +   +  +D    T      +  D+
Sbjct: 635 TSSAPWIPKRFSGKLVQEGQRKFMGTLWNTYAFFVLYANIDQFDATKYTLDYEKLSVMDK 694

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
            +LS  +  ++   EN+ N  I  A   +   V ++ + Y    +     K         
Sbjct: 695 WLLSKLNSAIKGTDENLANYRIPEAAKVLDEFVDDMSNWYVRRSRDRFWAKGMEQDKINA 754

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  + ++       +P +  +I+  L  +      +S+
Sbjct: 755 YMTLYTALVEICKAAAPMIPFMTEEIYQNLVRSINTEAPESI 796



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH     I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVETRTIKDMIPRYQTMKGKFVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T +   
Sbjct: 96  VEKLLGLNGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSKTVGFWADMDNPYVTYDDNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKNLLYKGFKIVPYCPRCGTPLSSQEVAQGYK 199


>gi|189083225|sp|Q1QDA4|SYL_PSYCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 919

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 6/210 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I+DVL+R++RL G +V+   G D  G     A
Sbjct: 71  SDKPSRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVMQPMGWDGFGLPAENA 130

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +  +N  + R    +L +S D      T    ++   + L+ ++  KG +
Sbjct: 131 AIANQTPPAKWTFENIDSMRAQLKLLGLSIDWSREFATCSPEYYQWEQWLFLQLYKKGLV 190

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G   +        V+  +   Y+F ++ Y D+LL  
Sbjct: 191 YKKLATVNWDPVDNTVLANEQVIDGKGWRSGAM----VEKRDIPMYYFNITDYADELLDD 246

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +             +     +S   ++  
Sbjct: 247 LDQLEGHWPSEVITMQRNWIGRSSGMEVHF 276



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 81/198 (40%), Gaps = 22/198 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP   I++ G D +R + +      +   +  D LK   N      +  
Sbjct: 669 EKMSKSKNNGVDPQITIDKYGADTVRLYTLFTAPADQTLEWSDDALKGPYN--FVKKVWR 726

Query: 361 LVSRSV------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRA 413
           + S  +      ++ L+  +       + ++  +++       + +I  ++  +L ++  
Sbjct: 727 IASEHIQALTDANLSLESLNSDALNTDSLSKEAKALRRKTHETIGKIDSDLGKRLALNTP 786

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ ++ L +E+  +          K + ++   V +   E +  L I+L  + P +   +
Sbjct: 787 VSSLMELANELSNF----------KASSEQELQVQH---EALTDLLIMLSVYAPHIGEYL 833

Query: 474 FDILFVADENRCFQSLDQ 491
            + L +      +  +D+
Sbjct: 834 LEQLGLDTVTLNYPMVDE 851


>gi|153938315|ref|YP_001389462.1| isoleucyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934211|gb|ABS39709.1| isoleucine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317566|gb|ADF97943.1| isoleucine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 1038

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 67/412 (16%), Positives = 142/412 (34%), Gaps = 20/412 (4%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPKNIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYVLYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPW--ELKKTNPDR 443
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  ELK      
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELKDDKIGA 737

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +T+  V   VI+  A     FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVLTTVIKVAA----PFVPFITEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|329943009|ref|ZP_08291783.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|325507049|gb|ADZ18687.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814556|gb|EGF84546.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 1043

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/489 (15%), Positives = 156/489 (31%), Gaps = 43/489 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDF 94
           F       V      D HG    +  +  G   K       ++ +              +
Sbjct: 333 FFVCKEHRVPMVCPVDNHGCFTEEIPEYQGQYIKSCDKGIIKSLKTQGKVFYHGTIMHRY 392

Query: 95  I---RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +  +    D      K  +     +++  +    E  +    
Sbjct: 393 PFCWRTDTPLIYKTVNSWFVSVEKIKDKMLQANKKIHWVPEHIKEGRFGKWLEGARDWAI 452

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +                 +     I  +E   ++     S L   
Sbjct: 453 SRNRYWGTPIPVWKSK-----------------DGEILVIGSVEELEKLTGEKVSDLHCH 495

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            + +   +   K      Y+   W D+         Y      +    +PAD    G D 
Sbjct: 496 FVDQLKVEKDGKSFHRVPYVFDCWFDSGAMPYAQNHYPFENQEATESGFPADFIAEGLDQ 555

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+ +   +  L         + +   +   G K+SK L N   P+ ++   G DAL
Sbjct: 556 TRGWFYTLTVISAALFDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADAL 615

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           R +L+  +    +D  +   G++  +   L      L        L  +D          
Sbjct: 616 RLYLLDSVVVKAEDLRFSDKGVESVLKQVLLPLTNVLSFFKTYTDLYGFDANNYDKEEIS 675

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKT 439
           ++E D+ ILS    V+ ++RE+M +  ++ A+   ++ + ++ + Y     ++ WE   T
Sbjct: 676 YSEIDKWILSNLYTVVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT 735

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            PDR         EV+     ++  F+P ++  I+  +   +     +S+     P   L
Sbjct: 736 -PDR-RAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIKTEN---SLESVHLCDFPHVDL 790

Query: 500 HKTFDPIFP 508
            K    +FP
Sbjct: 791 AK----VFP 795



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ RF  +DG  V    G D HG  +    +      T  
Sbjct: 48  PPFATGLPHYGHLLAGTIKDVVGRFATMDGYYVPRRFGWDCHGVPVEYEVEKSLNLTTPG 107

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
                 V + +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 108 AIEDFGVARFNEECRKIVFRYVDEWEHYINRVGRWVDFSATWKTMDASFMESVWWVFRSL 167

Query: 114 SDKGDIYK 121
            D+G +Y+
Sbjct: 168 YDQGLVYE 175


>gi|117924772|ref|YP_865389.1| valyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117608528|gb|ABK43983.1| valyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 929

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 127/364 (34%), Gaps = 62/364 (17%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL----SLSRKTFDWGIKIPD 222
           +  + ++             I    R                   +  + +  +G  +  
Sbjct: 390 WSKTYFEWMRNIQDWCISRQIWWGHRIPAWYGPDGQVFVCRTQEEASQKASQHYGKPVAL 449

Query: 223 DPQY-IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
                ++  W  +     +T G+ +      A F P ++ V G DI+ F    W A ++ 
Sbjct: 450 TQDNDVLDTWFSSALWTFSTLGWPEKSQ-ELASFHPTNVLVTGFDIIFF----WVARMIM 504

Query: 282 ANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEV--------------- 320
             L    +V  H   +H      +G K+SKS GNV+DP+++I+ +               
Sbjct: 505 MGLKFTDEVPFHTVYVHGLVRDGEGHKMSKSKGNVLDPLDLIDGISLEDLVAKRTRDMMQ 564

Query: 321 ----------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                                 G DALR+ L      G+D  +D   ++     +  N +
Sbjct: 565 PHLAKKIEKQTRKEFPDGIAAAGTDALRFTLASLATQGRDIKFDLGRMEG--YRNFCNKL 622

Query: 359 GNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            N  SR V M  +  D  +       + +D+ I+S   R  +++ ++++N     A   +
Sbjct: 623 WN-ASRFVLMNAEGQDCGLERVDLPLSVTDQWIVSKFQRTARDVTQDIENYRFSDAANTL 681

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQLAILLQAFVPKLANKI 473
              +     D Y +  K   L   N   A+   V +  V V+     LL   +P +  ++
Sbjct: 682 YQFLWGSYCDWYLEMVKT-TLYDENAAEAAKAAVRHTMVGVLEASLRLLHPLMPFITEEL 740

Query: 474 FDIL 477
           +  L
Sbjct: 741 WQKL 744



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 25/172 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R++R+ G + L+  GTD  G       +    
Sbjct: 41  CIMIPPPNVTGSLHMGHAFQDTIMDALIRYNRMQGHNTLWQCGTDHAGIATQMVVERQLE 100

Query: 68  T--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                           +V+  +       ++  R M    D S + F  T +    +  +
Sbjct: 101 AEGKSRHDLGRDAFIERVWEWKASSGNTITKQLRRMGASCDWSRERF--TMDDGLSEAVK 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQ 158
            ++ ++ ++  IY+G     +        +D EV    + G  ++ ++  V+
Sbjct: 159 EVFVRLYEEDLIYRGKRLVNWDPVLHTAVSDLEVISEEEQGHMWHMRYPMVE 210


>gi|313848165|emb|CBY17166.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci RD1]
          Length = 1043

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/489 (15%), Positives = 156/489 (31%), Gaps = 43/489 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDF 94
           F       V      D HG    +  +  G   K       ++ +              +
Sbjct: 333 FFVCKEHRVPMVCPVDNHGCFTEEIPEYQGQYIKSCDKGIIKSLKTQGKVFYHGTIMHRY 392

Query: 95  I---RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +  +    D      K  +     +++  +    E  +    
Sbjct: 393 PFCWRTDTPLIYKTVNSWFVSVEKIKDKMLQANKKIHWVPEHIKEGRFGKWLEGARDWAI 452

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +                 +     I  +E   ++     S L   
Sbjct: 453 SRNRYWGTPIPVWKSK-----------------DGEILVIGSVEELEKLTGEKVSDLHCH 495

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            + +   +   K      Y+   W D+         Y      +    +PAD    G D 
Sbjct: 496 FVDQLKVEKDGKSFHRVPYVFDCWFDSGAMPYAQNHYPFENQEATESGFPADFIAEGLDQ 555

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+ +   +  L         + +   +   G K+SK L N   P+ ++   G DAL
Sbjct: 556 TRGWFYTLTVISAALFDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADAL 615

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           R +L+  +    +D  +   G++  +   L      L        L  +D          
Sbjct: 616 RLYLLDSVVVKAEDLRFSDKGVESVLKQVLLPLTNVLSFFKTYTDLYGFDANNYDKEEIS 675

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKT 439
           ++E D+ ILS    V+ ++RE+M +  ++ A+   ++ + ++ + Y     ++ WE   T
Sbjct: 676 YSEIDKWILSNLYTVVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT 735

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            PDR         EV+     ++  F+P ++  I+  +   +     +S+     P   L
Sbjct: 736 -PDR-RAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIKTEN---SLESVHLCDFPHVDL 790

Query: 500 HKTFDPIFP 508
            K    +FP
Sbjct: 791 AK----VFP 795



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ RF  +DG  V    G D HG  +    +      T  
Sbjct: 48  PPFATGLPHYGHLLAGTIKDVVGRFATMDGYYVPRRFGWDCHGVPVEYEVEKSLNLTTPG 107

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
                 V + +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 108 AIEDFGVARFNEECRKIVFRYVDEWEHYINRVGRWVDFSATWKTMDASFMESVWWVFRSL 167

Query: 114 SDKGDIYK 121
            D+G +Y+
Sbjct: 168 YDQGLVYE 175


>gi|205356743|ref|ZP_03223503.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345382|gb|EDZ32025.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 870

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 147/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEYNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|182677224|ref|YP_001831370.1| leucyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182633107|gb|ACB93881.1| leucyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 893

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 72/204 (35%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y+     YP+ + H+GH     + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 49  TRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKRAKGFGVLHPMGWDAFGMPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N    R     + +S D    I T +  ++   + L+  + D G  Y
Sbjct: 109 MQNKSHPAEWTYANIATMRAQLKSMGLSLDWSREIATCDVAYYKHEQRLFLDLLDMGLAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +F ++  + + LL   
Sbjct: 169 RKQSKVNWDPVDCTVLANEQVIDG----RGWRSGALVEQRELTQWFLKIGDFAEDLLLAL 224

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           E+   +   +            GL
Sbjct: 225 ETLTRWPEKVRLMQANWIGRSEGL 248



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 115/393 (29%), Gaps = 84/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFV 200
            G   Q Y     P+   E  G      A     L    S  E   P++R    + ++  
Sbjct: 450 WGISRQRYWGCPIPIIHCEACGIVPVPRADLPVTLPKDVSFDEPGNPLDRHPTWKQVNCP 509

Query: 201 KSGLKDLSLSRKTFD-----WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           + G      +          W      DP            ++                 
Sbjct: 510 QCGRPARRETDTMDTFVDSSWYFARFTDPWNEADPTTPEAISHWL--------------- 554

Query: 256 WPADLHVIGKDILRFHAIYWPAFLLSANLP-------------LPKKVFSHGFILHKG-- 300
            P D ++ G +    H +Y   F  +  +                + +  H     K   
Sbjct: 555 -PVDQYIGGIEHAILHLLYARFFTRAMQVTSHMGDVKEPFSGLFTQGMVVHETYRAKDGA 613

Query: 301 --------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYF 328
                                           EK+SKS  N +DP E+I   G D  R+F
Sbjct: 614 WLFPSQLRFETQGNERRAFRLDTGEEALIGPIEKMSKSKRNTVDPDEIISTYGADTARWF 673

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESD 387
           ++      +D  + ++G++       A+     + R +  + +       P P  F E+ 
Sbjct: 674 VLTGSPPERDVIWTEEGVQG------ASKFVQRLWRLIGELAEAAGPEPVPQPALFGEAA 727

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            +I       L ++  +++    + A+A V  L +++     A +   +          +
Sbjct: 728 AAIRKAAHGALIKVENDIERLHFNTAIASVHDLANKLSAAIGAIESEVIGDD-------L 780

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +   E    +  L    +P LA + +  L  A
Sbjct: 781 RFACREAASIIVRLFAPMMPHLAEECWTRLGYA 813


>gi|330944522|ref|XP_003306389.1| hypothetical protein PTT_19524 [Pyrenophora teres f. teres 0-1]
 gi|311316121|gb|EFQ85512.1| hypothetical protein PTT_19524 [Pyrenophora teres f. teres 0-1]
          Length = 1448

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 5/237 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER   Y+     YP+   H+GH     I+DVLARF  + G  VL   G D  G     AA
Sbjct: 117 ERGNAYVLPMFPYPSGTLHLGHLRVYTISDVLARFKHMQGYKVLHPIGWDAFGLPAENAA 176

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  + +  QN    +     +     +D  IRT +   +   + ++  +   G  Y
Sbjct: 177 IERGVHPEKWTLQNIEAMKAQMKEMGGRWDWDAEIRTCDPDFYKHTQRIFLMLHQHGLAY 236

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ +  + +F ++  +Q+ LL   
Sbjct: 237 QAESLVNYDPVDQTVLANEQV--DANGFSWRSGAK-VEKVMLKQWFLKIKEFQEPLLKDL 293

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           ++        E+   +        +   LS         +  +P  +     D L  
Sbjct: 294 DALARDGRWPEKVLAMQRNWIGKSEGAKLSFDIVSTDSSMRFEPVDVFTTRPDTLFG 350



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 92/292 (31%), Gaps = 87/292 (29%)

Query: 257 PADLHVIGKDILRFHAIY-------------WPAFLLSANLPL----------------- 286
           P DL+V G +    H +Y             WP   L+   P                  
Sbjct: 633 PVDLYVGGVEHAILHLLYARFISKFLATTPTWPKGYLTNGEPFTRLIAQGMVHGETFTNP 692

Query: 287 -------PKKV-----------FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                  P +V            +        EK+SKS  N +DP   I + G DA R  
Sbjct: 693 ESGRFLRPDEVDLSNPSKPLIKATGSTPNVSYEKMSKSKYNGVDPGTTIAKYGADATRAH 752

Query: 329 LVREIACGKDGFYDKDGL--KKRVNADLANGIGNLV------------SRSVSMILKDYD 374
           ++ +   G    +D+  +   +R    +    G               +R  + IL+   
Sbjct: 753 MLFQAPVGDVLEWDEKKITGVERWLNRVMRLSGAFWLPDVDAKNFTIPTRIDATILEIIQ 812

Query: 375 GMIPTPGAFTESDESILSVC-----------SRVLQEIRENM-QNQLIHRALAQVISLVS 422
            + P   +  ++ E ++S+             + +  + E+  Q   ++  ++ +++L +
Sbjct: 813 ELFPKESSTLKTREQLISLLKPDEAKLWIKTQQTIASVTESYSQTYSLNTIVSDLMTLTN 872

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +         W      P  +     +    +  L  +L    P +A + +
Sbjct: 873 AI---------W----DTPHVSGKTPNLKWYSVAHLVRMLAPIAPGVAEEAW 911


>gi|313891853|ref|ZP_07825458.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119847|gb|EFR43034.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 823

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 30  ENKPKYYVLEMFPYPSGNLHMGHVRNYSIGDVIARFKKMQGFNVLHPMGYDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N +N       L +SYD  I   T ++ ++   + L++    +G  
Sbjct: 90  AIKNGIAPSKWTYSNIKNMIRQQTELGLSYDWDIDVLTCKEDYYKHTQKLFEVFYKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G          + V+      +FF+++ Y ++LL  
Sbjct: 150 YKKEAKVNWCNGCHTVLANEQVENGK----CWRCKSIVEKKNLSQWFFKITDYAERLLKD 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   +       G
Sbjct: 206 LDLLEGWPERVKSMQKNWIGKSEG 229



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 121/344 (35%), Gaps = 41/344 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+   ++ G            L          L     N+     K      
Sbjct: 429 QRYWGCPIPIICCKDCGNVPVPEKDLPVKLPEDVDFISGTLSPLETNKEFLNCKCPKCGK 488

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y  +       +  K+ +W   D ++ G +
Sbjct: 489 DALRET---------DTMDTFIDSSWYFLRYTDSKNENIPFEKEKSDYWMQVDQYIGGIE 539

Query: 267 ILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
               H +Y   F+       L  +    K +   G +L  G K+SKS+GNV+ P E++ +
Sbjct: 540 HAILHLLYSRFFMKVLYDEGLVRDSEPFKNLLCQGMVLKDGRKMSKSVGNVVSPEEIVSK 599

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R F++      KD  +   G++         G    + R   ++ +  +    +
Sbjct: 600 YGADTARLFILFAAPPEKDLEWSDKGVE---------GAYRFLKRVWIIVDRFINLKTES 650

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                E+++++     R + ++  ++      + A++ ++ LV+++  +           
Sbjct: 651 REELNENEKALRRRLHRSIAKVTSDLNGKFSFNTAISSIMELVNDMYHF----------- 699

Query: 439 TNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +  STV   V  E +R L ILL  FVP +  +++  +   +
Sbjct: 700 --SETESTVSESVVNECLRNLLILLAPFVPHITEELWQHIHQNE 741


>gi|257459728|ref|ZP_05624837.1| valyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257443153|gb|EEV18287.1| valyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 871

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 134/367 (36%), Gaps = 53/367 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + +F R      + ++   S      P    N   +     LKD  
Sbjct: 345 YCYRCKNVVEPYISQQWFVRA-DIAKEAIAKVNSGEAEFFPKHWIN-SFNAWMRELKDWC 402

Query: 209 LSRKTFDWGIKI---PDDPQY-------------------------IMYVWIDALTNYLT 240
           +SR+   WG +I     D  +                         ++  W  +    ++
Sbjct: 403 ISRQ-LWWGHRIPVFYCDCGHQWADERESPDACPKCGGKNFTQDPDVLDTWFSSGLWPIS 461

Query: 241 TTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
           T G+ +          +   ++F+P  + + G DIL F    + +        LP     
Sbjct: 462 TLGWGNGEALKNEKWFEEDLSEFYPNTMLITGFDILFFWVARMMFQCQNAMGELPFRDIY 521

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                    G+K+SKS  NV+DP+  I+E   D LR+ L      G+D     D L   +
Sbjct: 522 LHALVKDKDGKKMSKSSKNVVDPLLKIDEFSADILRFTLTILCVQGRDLRLSDDKLL--I 579

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             +  N + N  S+ + +    +D +       T   + +LS  +  +  +REN+     
Sbjct: 580 YRNFTNKLYN-ASKFLLLNASKFDDLDAAQ-IKTSLGKYMLSRFNCCVSAVRENLDEYRF 637

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           + A  ++         ++D    W ++ +  D+A+  +     + ++   LL  F+P L+
Sbjct: 638 NDAATELYKF------FWDEFCDWGIELSKADKAA--IGELGMIFKEAMKLLSPFMPFLS 689

Query: 471 NKIFDIL 477
             ++  L
Sbjct: 690 EYLYQEL 696



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGH+    + D++ R+ R+DG   L+  G D  G      
Sbjct: 34  QKGKNFCIMLPPPNVTGVLHIGHSLTYTLQDIMTRYKRMDGYKTLWQPGLDHAGIATQNV 93

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K     Q  +  + +      S   F  T ++ 
Sbjct: 94  VERELLAQGIKKEAIGREEFLKHVWHWKEQSGGQIVKQMKRLGVTPAWSRQRF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
             +  R  +  + D G I +G Y   +   D A  + +  +K   G+ Y+ ++
Sbjct: 152 LKNAVRKAFVSLYDAGLIVRGNYMVNWCTHDGALSDVEVEHKENKGKLYHLRY 204


>gi|148377630|ref|YP_001256506.1| leucyl-tRNA synthetase (leucine-tRNA ligase) [Mycoplasma agalactiae
           PG2]
 gi|148291676|emb|CAL59062.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 779

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+   H+GH     I D LARF+R  G +VL   G D  G     AA  
Sbjct: 32  PKKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRKGFNVLHPFGWDAFGLPAENAAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  QN  +  +    L IS+  +    T+++ +    + ++ K+ + G +Y+ 
Sbjct: 92  HNIHPKTWTYQNISSMNENIKKLGISFAWNYECITSDEIYTRWEQEIFIKMWNNGLVYRK 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE- 181
                +  +D+    +++V  G           P++  E E Y+ ++  Y  +L    E 
Sbjct: 152 KALLNWCNKDKTVLANEQVING----CCWRCDEPIEIKETEQYYLKIRDYAKELQESLEL 207

Query: 182 -SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                    +  +N  I++    L   S S       I+I  + +  + V
Sbjct: 208 LKGNWPDKVLSMQNNWINYKTGFLATFSDSLNKLKTNIEIFVNDKKDLDV 257



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 122/351 (34%), Gaps = 51/351 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KT 213
           P Q +  + +      Y    +         I+P +  N  +   ++   + S +     
Sbjct: 373 PSQSINMQDWGISRQRYWGAPIPMIHCAKCGIVPEKLENLPVKLPENVDFNKSGNPISSN 432

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG------------SKAKFWP-ADL 260
            +W                D    +  ++ Y                     ++W   D 
Sbjct: 433 LEWMQTKCPKCNSDALRETDTFDTFFESSWYFLRYTCPPELREKVALDKDSVEYWNSVDT 492

Query: 261 HVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           ++ G +    H +Y   F         +S   P  K + + G +L    K+SKS GN + 
Sbjct: 493 YIGGIEHAILHLLYARFFTKVMSDLGYISFREPF-KSLLTQGMVLKDSAKMSKSKGNTVS 551

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P +++E+ G D +R F++      K+  +  D ++        N + NL S+ +   +KD
Sbjct: 552 PTDLLEKYGADTVRLFILFAAPPAKELEWSDDSVEG--CNRFINRLYNLYSKVIP--VKD 607

Query: 373 YD-GMIPTPGAFTESDESILSVCSRVLQE----IRENMQNQLIHRALAQVISLVSEVDRY 427
           +         + +E ++S      + L++      +N      +  +A ++     ++ Y
Sbjct: 608 FSIIKNIHHNSLSEFEKSARMKLYQSLKKQESIYLDNRNEFAFNTLIAYIMET---LNSY 664

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                    +K           + +E       +L+ F+P LA ++ D LF
Sbjct: 665 ---------EKIEN------NSLLLEFFYISLNILEPFIPHLAWELSDKLF 700


>gi|89898154|ref|YP_515264.1| isoleucyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331526|dbj|BAE81119.1| isoleucyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 1043

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/462 (14%), Positives = 147/462 (31%), Gaps = 28/462 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       V      + HG    +  +  G     ++    +        L   +     
Sbjct: 333 FFVCKENRVPIVCPVNNHGCFTEEIPEYQG----QYIKSCDKGIIKSLKNLGKVF----- 383

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-----RDEAYYNDDEVYKGADGQYYN 151
                +H T    +                 + +     +D+    + +++   +     
Sbjct: 384 -----YHGTVMHRYPFCWRTDTPLIYKTVNSWFISVEKIKDKMLRANRKIHWVPEHIKDG 438

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLS 210
                +    +              +   +     ++   +  E I+  K S L    + 
Sbjct: 439 RFGKWLDGARDWAISRNRYWGTPIPIWKSKDGEILVIGSIKELEEITGTKVSDLHCHFID 498

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
           +   +   K+     Y+   W D+         Y           +PAD    G D    
Sbjct: 499 QLKVEKDGKLFQRVPYVFDCWFDSGAMPYAQNHYPFENQKETEAAFPADFIAEGLDQTRG 558

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +   +  L         + +   +   G K+SK L N   PI ++   G DALR +
Sbjct: 559 WFYTLTVISSALFDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPIGIMNTYGADALRLY 618

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRS---VSMILKDYDGMIPTPGAFT 384
           L+  +    +D  +   G++  +   L   + N++S       +   D D       A++
Sbjct: 619 LLNSVVVKAEDLRFSDKGVESILKQILLP-LTNVLSFFKTYTDLYGFDADMYGKEEIAYS 677

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDR 443
           E D+ ILS    V+ ++RE+M +  ++ A++  +S + ++ + Y    +    +  +   
Sbjct: 678 EIDKWILSDLYTVVGKVRESMNSYNLNTAVSPFVSFIDDLTNWYIRRCRRRFWESEDTPD 737

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                    EV+     ++  F+P ++  I+  +        
Sbjct: 738 RRAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIKTDKSEES 779



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ RF  +DG  V    G D HG  +    +      T  
Sbjct: 48  PPFATGLPHYGHLLAGTIKDVVGRFATMDGYYVPRRFGWDCHGVPVEYEVEKSLNLTTPG 107

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFIR-------------TTEKRHHDTCRILWKKI 113
                 V + +   R +       ++ ++              T +    +T   +++ +
Sbjct: 108 AIEDFGVAKFNEECRKIVFRYVDEWESYVTRLGRWVDFASTWKTMDASFMETVWWVFRSL 167

Query: 114 SDKGDIYK 121
            D+G +Y+
Sbjct: 168 YDQGLVYE 175


>gi|328914842|gb|AEB55675.1| isoleucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 1055

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/489 (15%), Positives = 156/489 (31%), Gaps = 43/489 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDF 94
           F       V      D HG    +  +  G   K       ++ +              +
Sbjct: 345 FFVCKEHRVPMVCPVDNHGCFTEEIPEYQGQYIKSCDKGIIKSLKTQGKVFYHGTIMHRY 404

Query: 95  I---RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +  +    D      K  +     +++  +    E  +    
Sbjct: 405 PFCWRTDTPLIYKTVNSWFVSVEKIKDKMLQANKKIHWVPEHIKEGRFGKWLEGARDWAI 464

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +                 +     I  +E   ++     S L   
Sbjct: 465 SRNRYWGTPIPVWKSK-----------------DGEILVIGSVEELEKLTGEKVSDLHCH 507

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            + +   +   K      Y+   W D+         Y      +    +PAD    G D 
Sbjct: 508 FVDQLKVEKDGKSFHRVPYVFDCWFDSGAMPYAQNHYPFENQEATESGFPADFIAEGLDQ 567

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+ +   +  L         + +   +   G K+SK L N   P+ ++   G DAL
Sbjct: 568 TRGWFYTLTVISAALFDQPAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMSIMNTYGADAL 627

Query: 326 RYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           R +L+  +    +D  +   G++  +   L      L        L  +D          
Sbjct: 628 RLYLLDSVVVKAEDLRFSDKGVESVLKQVLLPLTNVLSFFKTYTDLYGFDANNYDKEEIS 687

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKT 439
           ++E D+ ILS    V+ ++RE+M +  ++ A+   ++ + ++ + Y     ++ WE   T
Sbjct: 688 YSEIDKWILSNLYTVVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESADT 747

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            PDR         EV+     ++  F+P ++  I+  +   +     +S+     P   L
Sbjct: 748 -PDR-RAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIKTEN---SLESVHLCDFPHVDL 802

Query: 500 HKTFDPIFP 508
            K    +FP
Sbjct: 803 AK----VFP 807



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ RF  +DG  V    G D HG  +    +      T  
Sbjct: 60  PPFATGLPHYGHLLAGTIKDVVGRFATMDGYYVPRRFGWDCHGVPVEYEVEKSLNLTTPG 119

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
                 V + +   R +       ++ +I             +T +    ++   +++ +
Sbjct: 120 AIEDFGVARFNEECRKIVFRYVDEWEHYINRVGRWVDFSATWKTMDASFMESVWWVFRSL 179

Query: 114 SDKGDIYK 121
            D+G +Y+
Sbjct: 180 YDQGLVYE 187


>gi|160901828|ref|YP_001567409.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|226695263|sp|A9BF22|SYL_PETMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160359472|gb|ABX31086.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 828

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-AAQ 63
           +K Y      YP+   H+GH    +I DV+AR+ R+ G +V+   G D  G      A +
Sbjct: 33  KKYYDLVMFPYPSGTLHVGHVKNYVIGDVIARYKRMRGYNVMHPFGFDAFGLPAENAAIE 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +  QN    R+    L ISY+    + T ++ ++   + ++ ++   G  YK
Sbjct: 93  KGNIHPEDWTMQNINIIRNQIKKLGISYNWEREVITCKEDYYKWTQWIFLQLYKNGLAYK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V+  + E ++F+++ Y +KLL   E
Sbjct: 153 KKAPVNWCPNCKTVLANEQVVNGK----CERCGTVVEIKQLEQWYFKITDYAEKLLYDLE 208

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++   +       G
Sbjct: 209 KLSGWPENVKIMQKNWIGKSVG 230



 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 109/287 (37%), Gaps = 31/287 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y+         +      W P D ++ G +    H +Y   
Sbjct: 491 KREVDTMDTFVDSSWYYLRYVNPKLEDKPFNKEDVDNWLPVDQYIGGVEHAILHLLYSRF 550

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     +S + P  K +F+ G I   G K+SKS GNV+ P E+IE+ G DALR ++
Sbjct: 551 ITKVLKDLGYVSFDEPF-KNLFTQGMIYRNGAKMSKSKGNVVSPEEMIEKYGTDALRTYI 609

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  ++  G++        N + N   +    I+   +         +E D  
Sbjct: 610 LFMAPPERDAEWNDSGIEGTYR--FLNKVWNTYMKIQDKIIHLENKPNYPLKNKSEKD-- 665

Query: 390 ILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQ--KPWELKKTNPDRAST 446
           +     + +++I  +++ N   + A++ ++ L++E++ Y +    K W L          
Sbjct: 666 LRRKLHQTIEKITSDIEGNFQFNTAVSSLMELLNELNSYLNNTDDKDWNL---------- 715

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
              +  E      ++L    P ++ +++      +      +  +D+
Sbjct: 716 --NLLKEFSEDFVLMLSPIAPHISEELWKNFGKDEFIFKASWPEIDK 760


>gi|326436029|gb|EGD81599.1| leucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 845

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 5/209 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y      YP+   H+GH     I+D +ARFHRL G +V+   G D  G     AA 
Sbjct: 65  RSKFYALAMFPYPSGALHMGHVRVYTISDSVARFHRLTGKEVIHPMGWDAFGLPAENAAI 124

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N    ++  D L  S+D    + T    ++   + L+ ++  +G +Y+
Sbjct: 125 ERNIDPADWTIRNIAYMKEQLDALACSFDWEREVTTCSPSYYKWTQWLFLQLHKRGLVYQ 184

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V               V+      +F R++ Y ++L     
Sbjct: 185 DKALVNWDPVDQTVLANEQVDAE---GRSWRSGALVEKRRLRQWFLRITEYAEELERGLN 241

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLS 210
                    E +   I   +    D   S
Sbjct: 242 DVDWPESVKEMQRHWIGRSRGYFFDFCRS 270


>gi|303233314|ref|ZP_07319985.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480614|gb|EFL43703.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 877

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+     YP+   H+GHA    I DV+AR   + G DVL   G D  G     A
Sbjct: 42  SSKPKQYVLEMFPYPSGDLHMGHARNYTIGDVMARQLHMRGYDVLHPMGFDAFGLPAENA 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A        V+   N +        +  SYD      T +  ++   + ++ K+ +KG  
Sbjct: 102 AIKHHTEPSVWTYGNIKQATATMKRMGFSYDYSRTFNTCDPEYYRWGQWMFIKMWEKGLA 161

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G         H+  Q  +   ++ +++AY D+LLS 
Sbjct: 162 YRAYSDVNWCDTCNTVLANEQVING----CCWRCHSVAQKKKLSQWYLKITAYADELLSD 217

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   +  + +      +G
Sbjct: 218 LDTLNAWPENVIAQQKNWIGKSTG 241



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 88/287 (30%), Gaps = 31/287 (10%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
             +        +   D              Y                 W   D ++ G +
Sbjct: 514 RTTCPRCHKPARRITDTMDTFTCSSWYYLRYCDPHNTELPFSQQAVSRWMCVDHYIGGIE 573

Query: 267 ILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   +            + P    +       H GE +SKS GNV+ P  VIE
Sbjct: 574 HAILHLLYSRFWTKVMRDLGLCAIDEPFCHLLCQGMVRDHNGETMSKSKGNVVPPASVIE 633

Query: 319 EVGVDALRYFLVREIACGKDGFYDKD------GLKKRVNADLANGIGNLVSRSVSMILK- 371
             G D LR  ++      KD  +D+D         KR    +        S    ++   
Sbjct: 634 PYGADTLRLAILFIAPAEKDFDWDEDVVQGTNRFIKRAWKQVWQLAHIARSHDTHLLSDP 693

Query: 372 --DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD 429
             +         A T  + ++ S    +  +   + +    + A++ V+ LV+   +   
Sbjct: 694 ASEITLSDAQLAALTAPERALFSSLQELGTKCTNDFERCQFNTAISAVMELVNATTKCLH 753

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVI-RQLAILLQAFVPKLANKIFD 475
                       D   T+      +I R + ++L +  P +A +++ 
Sbjct: 754 ------------DGNETMNAQLAALIARDIVLMLASVCPHMAEELWH 788


>gi|291534305|emb|CBL07417.1| isoleucyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 1063

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 68/462 (14%), Positives = 148/462 (32%), Gaps = 25/462 (5%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
              D+ F    D  G+   +          VFV +         D   + +D        
Sbjct: 347 RKYDLPFVQLVDGKGELTKETPYAG-----VFVKKADPMVLKDLDEKGLLFD------AP 395

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD----GQYYNAQHN 155
           +        W+  +      +  +    + ++D+   N++ V    D    G++ +   N
Sbjct: 396 KFEHEYPHCWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTVNWIPDSIGKGRFGDWLEN 455

Query: 156 PVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SLSRK 212
              W       +   L  ++ +            L     N   + V+     + +++ K
Sbjct: 456 IQDWGISRNRYWGTPLPVWECECGHQECIGSRAELAERSGNPEDAKVELHRPYIDAVTFK 515

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             D G ++   P+ ++  W D+         Y         K +PA       D     F
Sbjct: 516 CPDCGKEMHRVPE-VIDCWFDSGAMPFAQHHYPFENKDVFEKQFPAKFISEAVDQTRGWF 574

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + LL    P    +         G+K+SKS GN +DP + +E  G DA+R++  
Sbjct: 575 YSLMAESTLLFNKAPYENVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWYFY 634

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDE 388
              A      +    +++     +           +   +  +D    T      +  D+
Sbjct: 635 TSSAPWIPKRFSGKLVQEGQRKFMGTLWNTYAFFVLYANIDQFDATKYTLDYEKLSVMDK 694

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
            +LS  +  ++   EN+ N  I  A   +   V ++ + Y    +     K         
Sbjct: 695 WLLSKLNSAIKGTDENLANYRIPEAAKVLDEFVDDMSNWYVRRSRDRFWAKGMEQDKINA 754

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  + ++       +P +  +I+  L  +      +S+
Sbjct: 755 YMTLYTALVEICKAAAPMIPFMTEEIYQNLVRSINTEAPESI 796



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH     I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVETRTIKDMIPRYQTMKGKFVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T +   
Sbjct: 96  VEKLLGLNGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSKTVGFWADMDNPYVTYDDNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKNLLYKGFKIVPYCPRCGTPLSSQEVAQGYK 199


>gi|74183057|dbj|BAE20481.1| unnamed protein product [Mus musculus]
          Length = 405

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+ + H+GH     ++D +ARF ++ G+ V+   G D  G     AA 
Sbjct: 80  KPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAI 139

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N ++ R   D L    S+D  I T    ++   + L+ K+ + G  Y+
Sbjct: 140 ERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 199

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V    +          V+      +F + +AY   +     
Sbjct: 200 KEALVNWDPVDQTVLANEQV---NEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALA 256

Query: 182 SHPEFILPIERRNEVISFV 200
             PE+      +   I   
Sbjct: 257 DLPEWYGIKGMQAHWIGDC 275


>gi|326389159|ref|ZP_08210739.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206390|gb|EGD57227.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 840

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + Y+     YP+ + HIGH     + DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 33  RPRSYVLEMFPYPSGRIHIGHVRNYTMGDVLARYKRMKGFEVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N  N +     L  + D    I T E  ++   + L+  +   G +Y+
Sbjct: 93  EKGVHPGGWTRDNIANMKAQLKRLGFALDWSREIATCEPEYYGHEQSLFIDLYQAGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V  G            V+  +   +F +++ + D LL+   
Sbjct: 153 KESAVNWDPIDHTVLANEQVIDG----RGWRSGALVEKRKLNQWFLKITQFADDLLNGLG 208

Query: 182 SHPEFILPIERRNEVISFVKSGLK 205
           +  ++   +    E       GL+
Sbjct: 209 TLDKWPEKVRLMQENWIGKSQGLQ 232



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 79/198 (39%), Gaps = 37/198 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP E++   G DA+R+F++ +    +D  + + G++         G    
Sbjct: 617 KMSKSKKNVVDPDEIVARYGADAIRWFMLSDSPPERDLPWSEAGIE---------GCARF 667

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   +  +            T  D+++     + +  +  +++    ++A+A++  L 
Sbjct: 668 VQRLWRLFAQY-------DATATGEDKAVARKAHQTVHAVAADIEALGFNKAVARIYELT 720

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                         ++K  P  + +      E IR L  L+   +P LA + +  +    
Sbjct: 721 G------------VIEKAAPSASRS------EAIRMLLQLIGPMMPHLAEEAWSAMG--- 759

Query: 482 ENRCFQSLDQRLKPGFML 499
           E     +    + P  ++
Sbjct: 760 EGLVADAAWPPVDPALLV 777


>gi|313206616|ref|YP_004045793.1| isoleucyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445932|gb|ADQ82287.1| Isoleucyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
          Length = 1132

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 101/277 (36%), Gaps = 6/277 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y         + K +PAD    G D     F+ ++
Sbjct: 597 KPMRRESDLIDVWFDSGAMPYAQLHYPFENKEFIEQNKAFPADFIAEGVDQTRGWFYTLH 656

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     V +   +   G+K+SK LGN +DP + + + G DA R++++    
Sbjct: 657 AIATSVFDSVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFDTLAKYGPDATRWYMISNAN 716

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             ++  +D DG+ +                ++   +  +           E D  ILS  
Sbjct: 717 PWENLKFDIDGVDEVRRKFFGTLYNTYSFFALYANVDGFKYAEKEVENRPEIDRWILSEL 776

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++E+ E   +    +    + + V++   + Y    +    K    +   +      
Sbjct: 777 NILVKEVTEFYNDYEPTKVARAINTFVNDNLSNWYVRLCRRRFWKGDYTEDKISAYQTLY 836

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  +A +     P   ++++  L    +    +S+
Sbjct: 837 TCLETVAKISAPIAPFFMDRLYQDLNKVTQRDTAESV 873



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + +          N  P I H     + D+  R+    G  V    G D HG  +   
Sbjct: 37  KGKPEFVFYEGPPSANGMPGIHHVMARALKDIFCRYQTQRGKQVFRKAGWDTHGLPVELG 96

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + D+ + +   +  +D   T + ++
Sbjct: 97  VEKELGITKEDIGKKISVEDYNQACRNAVMKYTDVWNDLTEKIGYWVDLEDPYITYKPKY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +T   L K++  K  +YKG     YS +
Sbjct: 157 METVWWLLKQLYTKNLLYKGYTIQPYSPK 185


>gi|260429181|ref|ZP_05783158.1| leucyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260419804|gb|EEX13057.1| leucyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 856

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ + +G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKQNGFNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L    D      T +  ++   + L+  +   G +Y
Sbjct: 90  MASGGHPKDWTYSNIDTMVEQMKPLGFGLDWSRMFATCDPEYYGQQQALFLDMLQAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S +  +LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERKELTQWFFKISDFSGELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +   ++   ++           GL+
Sbjct: 206 DGLDDWPAKVKLMQANWIGRSRGLQ 230



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 121/412 (29%), Gaps = 85/412 (20%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L Y E        I      +    +
Sbjct: 427 WGLSRQRYWGCPIPVVHCESCGVVPEKKENLPIALPYDEGGKPIDFSIP--GNPLDRHPT 484

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                  +            D       +    T+                 +   D ++
Sbjct: 485 WRDCACPTCGAPAKRETDTMDTFVDSSWYFARFTSPRA---ETPVDMAEAEYWMNVDQYI 541

Query: 263 IGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI------------ 296
            G +    H +Y      A  ++ +LP            + + +H               
Sbjct: 542 GGIEHAILHLLYSRFFARAMYITGHLPEKSKEPFNALFTQGMVTHAIYQTRSDEGRSVYH 601

Query: 297 -------------LHKGE--------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                        L  G         K+SKS  NV+DP+ +I + G D  R+F++ +   
Sbjct: 602 YPEEVELRDGKGFLEDGREVEIIPSAKMSKSKNNVVDPVAIIGQYGADTARWFVLSDSPP 661

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +   N  LA        R      +     +P  G     DE++L    
Sbjct: 662 ERDVEWTAAGAEA-ANKHLA--------RVFRACAEIAGSDVPPTGE----DEALLREMH 708

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + + ++   +++   + A+A++ +  + + +                RA T      +  
Sbjct: 709 KAIHDVTMGVESFGFNAAIARLYAFTNALTK---------------SRAGT--EAKTQAA 751

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
           R LA L+    P L+ +I+ +L    E     +   R     ++  T   PI
Sbjct: 752 RALAQLMSPMTPHLSEEIWQLLG--GEGLIADAAWPRADEAMLVEDTVTLPI 801


>gi|283957243|ref|ZP_06374704.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791255|gb|EFC30063.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 870

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 147/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEHNNQVGYCYRCNNVVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I +     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYAKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|302871850|ref|YP_003840486.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574709|gb|ADL42500.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 920

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 116/311 (37%), Gaps = 23/311 (7%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L    K    G    +    IM VW D+ +++             +   WP D+++ G D
Sbjct: 510 LPEGAKCPVCGCSEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGND 563

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F +    A       P    +     +  +G+K+SKS GNVI P ++I+E G D 
Sbjct: 564 QYRGWFQSSLLTAVATKGRAPYKIVLTHGFVVDGEGKKMSKSEGNVISPFDIIDEFGADI 623

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--A 382
           LR + V       D    KD +K+    ++   I N   R +   L D++      G   
Sbjct: 624 LRLWCVSADYTT-DMRISKDIIKQL--TEIYRKIRNTA-RFLLGNLYDFNPKTDKVGYEN 679

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KT 439
             E D+  L     +++++ +  +    ++    V +   +   + Y D  K      K+
Sbjct: 680 LKEIDKWALQRLYTLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKS 739

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRL 493
                     V  E++  L  L+   +   A +I+  +   +EN        +  +++ +
Sbjct: 740 ESLDRRAAQTVMYEILVALTKLIAPILSFTAEEIWQNIAYKEENVESVFLTSWPKVNEGI 799

Query: 494 KPGFMLHKTFD 504
                L + +D
Sbjct: 800 LKDETLREKWD 810



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R     L +   +++   T + +     
Sbjct: 105 VIKKLGVNRHEVNPVEFRKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 VRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTY 207


>gi|203284734|ref|YP_002222474.1| isoleucyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|259511495|sp|B5RN32|SYI_BORDL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|201084177|gb|ACH93768.1| isoleucyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 1044

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/401 (15%), Positives = 130/401 (32%), Gaps = 24/401 (5%)

Query: 95  IRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            RT     +      +    K         +        L+   +    E  +       
Sbjct: 396 YRTNSPLIYRPISSWFVNIEKIKEKLIRSNEQINWIPEHLKKGRFGKWLENARDWAISRN 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
               NP+   +      ++     + L          L  ++ +++    K G   +  S
Sbjct: 456 RFWGNPIPIWKCSKTGNKICIGSREELEKLSGQKIIDLHKDKIDKITWPSKYGGTYVRTS 515

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                           ++  W ++ +    +  Y           +PAD    G D    
Sbjct: 516 ---------------EVLDCWFESGSMPYASKHYPFKDKDKFQNIFPADFIAEGLDQTRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +      L         + +   +   G+K+SKSL N  DPI++I   G DALR +
Sbjct: 561 WFYTLTILGTALFEKTAFKNVIVNGLVLSSDGKKMSKSLKNYTDPIQIINTFGADALRLY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTES 386
           L+       D     D   K V  ++   I N  S  ++   I K               
Sbjct: 621 LIMSPVIKADDLKYSDDGVKDVLKNIIIPIWNAYSFFITYAIIDKFTPNNHVNLYKTNIL 680

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+ I+S    + Q + E +    + +++  +++ + +++ ++  +      K+  D   T
Sbjct: 681 DKWIISEIESLKQILNEEIDKYNLTKSIDVLLTFIDKLNNWYIRRSRRRFWKSENDNDKT 740

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                    ++ L ++L  F+P L  +I+  L   +E    
Sbjct: 741 DAYETLYYTLKNLMLMLAPFIPFLTEEIYQNLKTKNEKESI 781



 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           MK+RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MKQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMKGKHVKRYFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    + +                     +  V + ++ ++ +   L   + +++  +
Sbjct: 90  LPVEYEVEKSLKLSGRYEIEQYGIDKFNEECRNIVLRYTKEWKKIITRLGRWVDFENNYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDLTFMESVWWVFKTLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|330960154|gb|EGH60414.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 868

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 117/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +      +    A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQSHVAQGPATVLDIAALTDEQKA 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA    
Sbjct: 709 IRRSIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L  ++
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTELGHSE 788


>gi|320322691|gb|EFW78784.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 868

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|315022110|gb|EFT35139.1| isoleucyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335943|gb|ADZ12217.1| Isoleucyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 1132

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 101/277 (36%), Gaps = 6/277 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y         + K +PAD    G D     F+ ++
Sbjct: 597 KPMRRESDLIDVWFDSGAMPYAQLHYPFENKEFIEQNKAFPADFIAEGVDQTRGWFYTLH 656

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     V +   +   G+K+SK LGN +DP + + + G DA R++++    
Sbjct: 657 AIATSVFDSVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFDTLAKYGPDATRWYMISNAN 716

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             ++  +D DG+ +                ++   +  +           E D  ILS  
Sbjct: 717 PWENLKFDIDGVDEVRRKFFGTLYNTYSFFALYANVDGFKYAEKEVENRPEIDRWILSEL 776

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++E+ E   +    +    + + V++   + Y    +    K    +   +      
Sbjct: 777 NILVKEVTEFYNDYEPTKVARAINTFVNDNLSNWYVRLCRRRFWKGDYTEDKISAYQTLY 836

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  +A +     P   ++++  L    +    +S+
Sbjct: 837 TCLETVAKISAPIAPFFMDRLYQDLNKVTQRDTAESV 873



 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + +          N  P I H     + D+  R+    G  V    G D HG  +   
Sbjct: 37  KGKPEFVFYEGPPSANGMPGIHHVMARALKDIFCRYQTQKGKQVFRKAGWDTHGLPVELG 96

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + D+ + +   +  +D   T + ++
Sbjct: 97  VEKELGITKEDIGKKISVEDYNQACRNAVMKYTDVWNDLTEKIGYWVDLEDPYITYKPKY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +T   L K++  K  +YKG     YS +
Sbjct: 157 METVWWLLKQLYTKNLLYKGYTIQPYSPK 185


>gi|289581414|ref|YP_003479880.1| isoleucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530967|gb|ADD05318.1| isoleucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 1070

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 102/274 (37%), Gaps = 12/274 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW+D+      T  Y  +        WPAD  +   D     F +          ++
Sbjct: 529 VFDVWLDSSVASWGTLNYPSDDSQ-FDDLWPADFILEAHDQTRGWFWSQLGMGTAALGDI 587

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     ++  G  +SKS   ++DP E I+  G D +R FL+     G D  +  +
Sbjct: 588 PYEEVLMHGHALMPDGRAMSKSKDILVDPHEAIDRHGRDVMRAFLLSNNPQGDDMRFSWE 647

Query: 345 GLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT----PGAFTESDESILSVCSRVLQ 399
           G++   N      + N+    +  M L ++D    T           DE +L+       
Sbjct: 648 GMQTMENH--LRTLWNVFRFPLPYMRLDEFDPQATTVEDVQADLELIDEWVLARLQSTKD 705

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           E+  +   +   +AL  +I  V E V R Y  A +    ++ +             V+R+
Sbjct: 706 EMTAHFDERRQDKALNALIDFVVEDVSRFYVQAVRERMWEEEDSASKEAAYATIYRVLRE 765

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              LL  + P ++ +I+  L    E+      D 
Sbjct: 766 TVALLAPYAPFISEEIYGTLTGDAEHDTVHMCDW 799



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E  +      Y +   H+G  +   + DV  RFHR+ G DV    G D HG  I   
Sbjct: 38  SDGESFFFVDGPPYTSGSAHMGTTWNKSLKDVYIRFHRMQGYDVTDRPGYDMHGLPIETR 97

Query: 62  AQ-----NAGVTTKVFVDQNS-----RNFRDMADVLDISYDDF---------IRTTEKRH 102
            +           + + ++N          +  + L   + DF          RT    +
Sbjct: 98  VEGQLGFENKKDIEEYGEENFIEACKEYADEQLEGLQSDFQDFGVWMDWENPYRTVSPEY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +     + K +++G + KG  S     R E    ++EV  
Sbjct: 158 MEAAWWGFSKAAERGLVEKGHRSISQCPRCETAIANNEVEY 198


>gi|192288721|ref|YP_001989326.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|238692576|sp|B3Q8A1|SYL_RHOPT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|192282470|gb|ACE98850.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 876

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RKKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  K +   N    +     + +S D      T +  ++   + ++      G + +
Sbjct: 93  ERKIAPKAWTYDNIAAMKKQLQTMGLSLDWAREFATCDPSYYKHQQKMFLDFLKVGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 153 EKRKLNWDPVDMTVLANEQVIDG----RGWRSGAVVELREMNQWVFKITKYAQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +            GL   
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGLMVR 234



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 77/204 (37%), Gaps = 24/204 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G+K    +     +  
Sbjct: 631 EKMSKSKRNTVDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVKGA--SRFVQRLWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +V+ +  +           P +F     ++       L ++   ++    + +LA +   
Sbjct: 689 MVNDAAPIAAS---APAERPASFGADALTLRKAAHGALDKVLSGIERLAFNVSLAHIREF 745

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR----QLAILLQAFVPKLANKIFDI 476
            + +                  R+ T        IR     L  L    +P LA + + +
Sbjct: 746 SNTL-------------GDALARSQTPSPDLAWAIRESTVILVQLFHPMMPHLAEECWTV 792

Query: 477 LFVADENRCFQSLDQRLKPGFMLH 500
           L         ++L  +++P  ++ 
Sbjct: 793 LGQTG--LVSEALWPQIEPDLLVE 814


>gi|300775296|ref|ZP_07085158.1| isoleucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506036|gb|EFK37172.1| isoleucine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 1131

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 107/298 (35%), Gaps = 14/298 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y           K +PAD    G D     F+ ++
Sbjct: 596 KAMKRESDLIDVWFDSGSMPYAQLHYPFENKELIDNNKAFPADFIAEGVDQTRGWFYTLH 655

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +  ++     + +   +   G+K+SK LGN +DP E +   G DA R++++    
Sbjct: 656 AIGTAVFDSVAYKNVMSNGLVLDKNGQKMSKRLGNAVDPFETLAVYGPDATRWYMISNAN 715

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             ++  +D +G+ +                ++   +  ++          E D  ILS  
Sbjct: 716 PWENLKFDIEGIDEVRRKFFGTLYNTYSFFALYANVDGFNYSEKEVENRPEIDRWILSEL 775

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++E++   ++    R    + + V++   + Y    +    K    D   +      
Sbjct: 776 NLLIKEVKAFYEDYEPTRVARAISTFVNDNLSNWYVRLCRRRFWKGEYSDDKISAYQTLY 835

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF--VADEN------RCFQSLDQRLKPGFMLHKT 502
             +  +A L     P   ++++  L      EN        F   D+ L    ++ KT
Sbjct: 836 TCLETVAKLSAPIAPFFMDQLYQDLNKVTGKENCESVHLTDFPVADENLIDQDLVEKT 893



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N  P I H     + D+  R+   +G  V    G D HG  +   
Sbjct: 37  QGNPEFVFYEGPPSANGMPGIHHVMARALKDIFCRYQTQNGKQVFRKAGWDTHGLPVELG 96

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + ++ + +   +  DD   T + ++
Sbjct: 97  VEKELGITKEDIGKKISIEDYNKACREAVMRYTDVWNNLTEKIGYWVDLDDPYITYKSKY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +T   L K++ DK  +YKG     YS +
Sbjct: 157 METVWWLLKQLYDKNLLYKGYTIQPYSPK 185


>gi|289625790|ref|ZP_06458744.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867186|gb|EGH01895.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330871074|gb|EGH05783.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 868

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKA 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|254786695|ref|YP_003074124.1| valyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237684476|gb|ACR11740.1| valine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 922

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 82/502 (16%), Positives = 158/502 (31%), Gaps = 103/502 (20%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     +      R   ++++I  D      + + +      ++ +              
Sbjct: 270 TPAHDFNDYEMGQRHNLEMINIFND------DAQINAAAPEKYRGLDRFVARK-----QI 318

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
            +  D     +          Y +  +  ++      ++ R     +K ++  E      
Sbjct: 319 VADLDALGLLEKIDDHNLKVPYGDRSNVVIEPYLTNQWYVRTQPLAEKAIAAVEDGDIAF 378

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDP--------------------- 224
           +P +  N   S+++  ++D  +SR+   WG  I    D                      
Sbjct: 379 VPKQYENMYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDDAGQVYVGRDEADVRKKYNLGD 436

Query: 225 -------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
                    ++  W  +      T G+ +  D  K    P+ + V G DI+ F    W A
Sbjct: 437 SLALKQDDDVLDTWFSSGLWTFGTLGWPEETDFLKTFH-PSSVLVTGFDIIFF----WVA 491

Query: 278 FLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIE------------- 318
            ++   L   K++  H   +H      +G+K+SKS GNV+DPI++I+             
Sbjct: 492 RMIMLTLYFKKEIPFHTVYVHGLVRDSQGQKMSKSKGNVLDPIDLIDGIDLESLVKKRTT 551

Query: 319 ------------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                                     G DALRY      + G+D  +D   ++     + 
Sbjct: 552 GLMNPKDAAKIEKNTRKEFPDGLASYGTDALRYTYYSLASTGRDINFDVGRIEG--FRNF 609

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHR 412
            N I    S  V M  +  D           T +D  I+S   +  + + E M    +  
Sbjct: 610 CNKIWQ-ASNYVLMNTEGQDCAQDDSTEYELTLADRWIVSRLQQAEKAVIEGMDTYRLDL 668

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKL 469
           A   +     +   D Y +  KP        ++         + V+     L   F+P +
Sbjct: 669 ASQALYDFFWKDYCDWYLELTKPVLTGDFASEQVRIGTRRTLIRVLETTLRLAHPFMPFI 728

Query: 470 ANKIFDIL----FVADENRCFQ 487
             +I+  +     V  E    Q
Sbjct: 729 TEEIWQKIKPLAGVEGETLMLQ 750



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E   I           H+GH ++  I D L R+HR+ G + L+  GTD  G       
Sbjct: 29  EGEPYCIMIPPPNVTGSLHMGHGFQESIMDALIRYHRMKGCNTLWQVGTDHAGIATQMVV 88

Query: 63  Q-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                         K       +R  R +    D S + F  T ++  
Sbjct: 89  ERLLDAENITRHDLGRDKFIEKVWEWKEHSGGTITRQLRRLGASPDWSRERF--TMDEGF 146

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +   + ++ ++ D   IY+G     +  +     +D EV       +      P+
Sbjct: 147 YQAVQEVFIRLYDDKLIYRGKRLVNWDPKLHTAISDLEVVSKEQKGHLWHFRYPL 201


>gi|304404030|ref|ZP_07385692.1| isoleucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304347008|gb|EFM12840.1| isoleucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 1031

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 10/266 (3%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           +      ++ VW D+ +       Y        A  +PAD+   G D     F ++   +
Sbjct: 507 VMTRTSEVIDVWFDSGSMPFAQQHYPFGDQEKFADQYPADIICEGIDQTRGWFFSLLAVS 566

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L +   P    + +   +   G+K+SKS GNVIDP E+I E G DA R+ L+ + A   
Sbjct: 567 TLFNGKAPYKAVISTGHILDENGQKMSKSKGNVIDPWEIINEFGTDAFRWALLADSAPWN 626

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSV 393
              +   G+     + + + I N  + +   +    DG  P+   +  S    D  I+S 
Sbjct: 627 SKRFS-RGIVGEAKSKVIDTIVN--THAFFALYASIDGYKPSEHTYQPSEAKLDRWIVSR 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTV 452
            + ++ ++ + ++          + + V E+ + Y    +                    
Sbjct: 684 LNSLIAQVSKGLEVNDFLNPAKLIETFVDELSNWYIRRSRDRFWGSGLTADKLAAYGTLQ 743

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
            V+  L+ L+  + P +A  ++  L 
Sbjct: 744 HVLLTLSRLIAPYAPLVAEDVYGNLG 769



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 59/166 (35%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  PHIGH    +I D + R+  + G  V+   G D HG  +   
Sbjct: 35  EGKPNFVFYEGPPTANGAPHIGHVLGRVIKDFICRYKTMSGYRVVRKAGWDTHGLPVELG 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISY----DDFIRTTEK 100
            +                       K  V +  + +R++ +   I+Y    D+   T + 
Sbjct: 95  VEKQLGISGKQEIEKYGIEAFVKKCKDSVFEYEKQWRELTE--GIAYWTDMDNPYITLQN 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++   +   I  KG +Y+G     Y    +   +  EV +G +
Sbjct: 153 EYIESVWHILSTIHSKGLLYRGHRVSPYCPCCQTTLSSHEVAQGYE 198


>gi|289648425|ref|ZP_06479768.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 868

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKA 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|119494198|ref|ZP_01624670.1| leucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452132|gb|EAW33338.1| leucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 995

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  QKPKFYTLAMFPYPSGNLHMGHVRVYTIIDVIARLKRMQGFRVLNPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +  QN    +   + L IS+D    + T    ++   + ++ +  + G  Y
Sbjct: 91  IERNIHPAKWTYQNIAQMKQQLERLGISFDWEKELATCSPDYYRWTQWIFLQFYNAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V   ++G+ + +    V+      +F +++ Y ++LL+  
Sbjct: 151 QKEAAVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERKLLRQWFLKITEYAEELLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++          +G
Sbjct: 208 DKLPGWPERVKLMQANWIGKSTG 230



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 50/123 (40%), Gaps = 19/123 (15%)

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFD 429
            D+  +       ++ ++ +       ++E+ E++  +   + A+++++ L + +     
Sbjct: 817 NDFKPIPEETLELSKEEKDLRRAIHTAIKEVTEDLDGDYQFNTAVSELMKLSNAI----- 871

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQ 487
                    ++ D  ++   V  E I  L  LL  F P ++ +++  L   D    + + 
Sbjct: 872 ---------SDADCKNS--PVYREGIETLLKLLAPFSPHISEELWQSLGYKDSVHTQTWP 920

Query: 488 SLD 490
            +D
Sbjct: 921 DVD 923



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 71/227 (31%), Gaps = 55/227 (24%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVI 263
            ++      G     +    M  ++D+   ++      ++      K    + P D +V 
Sbjct: 478 WVNVPCPSCGTPAKRETD-TMDTFMDSSWYFMRYPDANNDQQVFDPKIGNDWMPVDQYVG 536

Query: 264 GKDILRFHAIYWP--------AFLLSANLPL----------------------------- 286
           G +    H +Y            LL+ + P                              
Sbjct: 537 GIEHAILHLLYSRFFTKVMRDCKLLNCDEPFSRLLTQGMVHGLTYKNPVTGKYIPSAKVN 596

Query: 287 ---PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              PK   +   +    EK+SKS  N +DP+EV+ + G D  R F++ +    KD  +D 
Sbjct: 597 PEDPKDPETGEKLEVFYEKMSKSKYNGVDPLEVMAKYGADTARMFILFKAPPEKDLEWDD 656

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDES 389
             ++         G    ++R   ++ +      P         D+ 
Sbjct: 657 ADVE---------GQFRFLNRVWRLVSEFSRYHTPNILPQEQPQDKW 694


>gi|147921580|ref|YP_684603.1| valyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|56295572|emb|CAH04814.1| tRNA synthetase Val [uncultured archaeon]
 gi|110619999|emb|CAJ35277.1| valyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 814

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/336 (19%), Positives = 115/336 (34%), Gaps = 24/336 (7%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFIL----PIERRNEVISFVKSGLKDLSLS----- 210
              E    R   +   L   +    +       P+    +    V +    L +      
Sbjct: 378 WYPEHMKVRYDTWIQGLKWDWCISRQRYFGVPFPVWYCAKCGEAVVAEDSQLPVDPLVDR 437

Query: 211 --RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
             +     G    +  + +M  W  +    L  + + +       + +P  L     DI+
Sbjct: 438 PLKPCPKCGSTEFEPEKDVMDTWATSSITPLINSNWGEPNSYID-QIYPMSLRPQAHDII 496

Query: 269 RFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           R    Y    ++L +  LP    + S   +   G+ + KS GNVI+P+ VI +   DALR
Sbjct: 497 RTWLFYTVIKSYLHTGTLPWQNVMISGHGLDANGKAMHKSKGNVIEPLPVIAKYSADALR 556

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++       G D  + +  +         N + N  SR  +M L+ +             
Sbjct: 557 WW-AASAKLGDDMPFKEKEIV--YGQKFLNKLWN-ASRFCAMHLQGF--KPEAKAQLELI 610

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D  ILS  + V++E  E+ +     +A   V         D Y +  K     K     A
Sbjct: 611 DHWILSKLNNVIRESTESFERYEYSKAKVAVEQFFWGDFCDNYLEMVKDRLYSKDEARAA 670

Query: 445 S--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           S    LY    V+     +L  F P +  +I+  LF
Sbjct: 671 SRDAALYTLYTVLLDSLKMLGPFTPHVTEEIYQCLF 706



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I T     +   H+GH +    A+ +AR+ R+ G +V +  G D++G    + 
Sbjct: 33  SKKPVFSIDTPPPTLSGYIHMGHVFSYSQAEFVARYQRMKGCNVFYPMGFDDNGLPTERY 92

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTC 106
            +                       +   +++R++   L IS D      T  KR     
Sbjct: 93  VEKKYKVNIKDIGREEFVKLCLQETEIGGKSYRNIWTTLGISVDWSLLYSTINKRCQRIS 152

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  +  I   G + +      +    +
Sbjct: 153 QRSFLDIYRTGRVERRNEPAIWCPLCQ 179


>gi|298488998|ref|ZP_07007021.1| Leucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156496|gb|EFH97593.1| Leucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 868

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|260914364|ref|ZP_05920833.1| valine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631465|gb|EEX49647.1| valine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 954

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/450 (16%), Positives = 146/450 (32%), Gaps = 94/450 (20%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
               +  +E    ++         Y +    P++ M  + ++  + +  +  +   E   
Sbjct: 348 KQIVADFEELGLLEEIKPHDLKVPYGDRGGVPIEPMLTDQWYVSVKSLAEVAVKAVEDGE 407

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV------------ 230
              +P +  N   S+++  ++D  +SR+   WG  I    D Q  +YV            
Sbjct: 408 IQFVPKQYENLYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDEQGNVYVARDEAEVRAKHN 465

Query: 231 ----------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                           W  +     +T G+ +     K      D+ + G DI+ F    
Sbjct: 466 LPADLPLKQDEDVLDTWFSSGLWTFSTLGWPNQTPDLKMFH-STDVLITGFDIIFFWVAR 524

Query: 275 WPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-------- 318
              F +           +P      +      +G+K+SKS GNVIDP+++I+        
Sbjct: 525 MIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVIDPLDMIDGIDLESLL 584

Query: 319 -----------------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                                        E G DALR+ L      G+D  +D   L+  
Sbjct: 585 EKRTGNMMQPQLAEKISKATVKAFPEGIAEHGTDALRFTLTALATNGRDINWDMKRLEGY 644

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQN 407
            N        N +  +   +L + D +  + G   ++ +D  I S  +R ++  R  +  
Sbjct: 645 RN------FCNKLWNASRFVLTN-DKLDLSEGSVEYSVADRWIQSEFNRTVEAFRSALAQ 697

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                    +         D Y +  KP      +  +        + V+ +L  L    
Sbjct: 698 FRFDLCATALYEFTWNQFCDWYLELTKP-VFASGSSAQKRGASQTLINVLEKLLRLTHPV 756

Query: 466 VPKLANKIFDIL----FVADENRCFQSLDQ 491
           +P +  +I+  +     V  +    QS  Q
Sbjct: 757 MPFITEEIWQKVKEFAGVNGDTIMLQSFPQ 786



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I+          H+GHA++  + D+L RF+R++G + L+ TGTD  G      
Sbjct: 36  TSKPSYSIAIPPPNVTGSLHMGHAFQQTLMDILIRFNRMEGHNTLWQTGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T ++
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSEAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|257482215|ref|ZP_05636256.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330987613|gb|EGH85716.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331011322|gb|EGH91378.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 868

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|197106978|ref|YP_002132355.1| leucyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|254782509|sp|B4RCZ4|SYL_PHEZH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196480398|gb|ACG79926.1| leucyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 867

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 6/219 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+ R     VL   G D  G     AA
Sbjct: 32  GKRKYYVLEMFPYPSGRLHMGHVRNYALGDVIARYKRAQDFSVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +   N    R     L +S D      T +  ++   + L+ ++ ++G +Y
Sbjct: 92  MERGVDPKAWTYDNIARMRAELKELGLSIDWSREFATCDVEYYGQQQALFLELFERGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G           PV+  +   +F +++ Y D+L+   
Sbjct: 152 RKESVVNWDPVDQTVLANEQVVDGKG----WRSGAPVEKRKLAQWFLKITQYADQLVDDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           ++   +   +    E       G +           G +
Sbjct: 208 KTLDRWPEKVRVMQENWIGRSKGARLRFRFAGQPPAGHE 246



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 23/180 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P E+ +  GVDA R F++ +    +D  +   G++         G   
Sbjct: 626 EKMSKSKKNTVAPEEIFDVYGVDAARLFVLSDSPPERDAQWSTSGVQ---------GAWR 676

Query: 361 LVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            V+R         + +  T  A T  + +++    ++ ++ + E ++    + A+A + S
Sbjct: 677 FVNRVWDEFDASEEPVPGTEEAVTGVATDNLRRQHAKTVKAVTEAIEGFRFNSAIAHLYS 736

Query: 420 LVSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++             LK   P  RA  + +     +R  A+L+  F P LA + +  + 
Sbjct: 737 FLN------------VLKAERPQGRAGALAHAHRAALRDFALLIAPFTPHLAEECWARIG 784


>gi|71736375|ref|YP_276510.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123733881|sp|Q48DN1|SYL_PSE14 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71556928|gb|AAZ36139.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 868

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|219684920|ref|ZP_03539861.1| isoleucyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671658|gb|EED28714.1| isoleucyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 985

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/413 (15%), Positives = 138/413 (33%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+  Y   Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQY 226
              +      ++ +     +  +   ++    K  L++LS  +        I     P  
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELEELSGQKIEDLHKDKIDKITWPSK 506

Query: 227 ----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFENESNFKNTFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP+EVI   G DALR +L+    
Sbjct: 567 ILGTSLFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPAKNLSLVKSNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + + + +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNKEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M++RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MEQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMKGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIILRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDISFMESVWWVFKNLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|85709981|ref|ZP_01041046.1| leucyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688691|gb|EAQ28695.1| leucyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 835

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 78/205 (38%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K YI     YP+ + H+GH     + DVLAR+  + G +VL   G D  G     A
Sbjct: 31  SDKPKSYILEMFPYPSGRIHMGHVRNYTMGDVLARYKAMRGFEVLHPMGWDAFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N    +     +  + D      T +  ++   + L+  + + G +
Sbjct: 91  AMEKKVHPGEWTYANIEAMKAQLKRIGFALDWTREFATCDAEYYGHEQALFLDMYEAGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  + + +F +++ +   LL  
Sbjct: 151 YRRSSEVNWDPVDMTVLANEQVIDGKG----WRSGAEVEKRKLDQWFLKITDFAQGLLDG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +   ++   ++   E      SGL
Sbjct: 207 LDELEDWPDKVKLMQENWIGKSSGL 231



 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 119/368 (32%), Gaps = 66/368 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFV 200
            G   Q Y     P    +E G            L           P+ER    + +   
Sbjct: 420 WGISRQRYWGTPIPFIHCDECGIVPVPKDQLPVKLPEDVDFETPGNPLERHATWKHVDCP 479

Query: 201 KSGLKDLSL----------SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           K G K              S     +  +  D P     +       +            
Sbjct: 480 KCGGKATRETDTLDTFTNSSWYFLRFASQPADAPFDPEEIAKWMPVQHYIGGIEHAILHL 539

Query: 251 SKAKFWPADLHVIGK--DILRFHAIYWPAFLLSANLPLPKK-VFSHGFILHKGEK----- 302
             A+FW   L  IGK      F +++    +      L  +   S   +  +GEK     
Sbjct: 540 LYARFWTRALAHIGKLDVKEPFASLFTQGMVTHETYRLADRGWLSPAEVRIEGEKAFSLD 599

Query: 303 ------------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                       +SKS  NV+DP  +I+E G DA+R+F++ +    +D  + + G++   
Sbjct: 600 GGEEVERGRVVKMSKSKKNVVDPDNIIDEYGADAVRWFMLSDSPPERDLPWSEAGIE--- 656

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                 G    V R   +    +D +     + T  D+S+     + +  + E+++    
Sbjct: 657 ------GCWRFVQRLWRL----FDQI---DESATGEDKSLARKAHQAIVAVAEDIEALSF 703

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++A+A++  L                +K  P  +          IR +  L+   +P LA
Sbjct: 704 NKAVARIYELTGAA------------EKAAPSESRN------FAIRTILHLIAPMMPHLA 745

Query: 471 NKIFDILF 478
            + +  L 
Sbjct: 746 EEAYAKLG 753


>gi|254510996|ref|ZP_05123063.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534707|gb|EEE37695.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 861

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR     G +VL   G D  G     AA
Sbjct: 41  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARHKLATGHNVLHPMGWDAFGMPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N  + R     L +S D      T +  ++   + L+  + D G +Y
Sbjct: 101 MASGGHPKDWTYGNIADMRGQMKPLGLSIDWSREFATCDPEYYGQQQALFLDMLDAGLVY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y ++LL+  
Sbjct: 161 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERRELTQWFFKISDYSEELLNAL 216

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   +    E       GL+
Sbjct: 217 DTLDNWPAKVRLMQENWIGKSRGLQ 241



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 126/382 (32%), Gaps = 83/382 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G            L Y + + + I      N +      
Sbjct: 435 WGLSRQRYWGCPIPVVHCEKCGTVPEKKENLPIELPYDDGNGKPIDFSIPGNPLDRHPN- 493

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS--KAKFW-PAD 259
                         G     +    M  ++D+   Y   T           +A++W   D
Sbjct: 494 -----WRDAPCPSCGAPAKRETD-TMDTFVDSSWYYARFTAPRAETPTDLAEAEYWMNVD 547

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP-----LPKKVFSHGFILHK----------- 299
            ++ G +    H +Y      A  ++ +LP         +F+ G + H+           
Sbjct: 548 QYIGGIEHAILHLLYSRFFARAMQITGHLPKKAIEPFDALFTQGMVTHEIYQTRDANGRP 607

Query: 300 -----------------------GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                    K+SKS  NV+DP+ +I   G D  R+F++ +    
Sbjct: 608 VYHLPEDVTDGKLADGTEVEIIPSAKMSKSKKNVVDPVSIISAFGADTARWFVLSDSPPE 667

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G      A+ A    + V R  S I +       +       DE++L    +
Sbjct: 668 RDVEWTASG------AEAAFKHLSRVHRIASEIAE-------SDNPANAEDETLLREMHK 714

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + ++   +++   + ++A++ +  +             L K+   RA T      E  +
Sbjct: 715 AIHDVSGGVESFGFNASIARLYAFTN------------TLAKS---RAGTAAR--REAAK 757

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            LA L+    P L+ +++ +L 
Sbjct: 758 TLAQLMSPMTPHLSEELWQLLG 779


>gi|15892508|ref|NP_360222.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|32130175|sp|Q92I35|SYL_RICCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15619667|gb|AAL03123.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 835

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N +N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKKWTYSNIKNMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V     + +F +++ Y ++LL+ 
Sbjct: 144 YQKESFVNWDPVDNTVLANEQVVDG----RGWRSGAIVVKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 126/389 (32%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEICGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFTRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N +  +     S+               +E ++ +  +    ++ + E+
Sbjct: 645 GIEG--CSRFINKLEYMFKAIDSL----------KDDVNSEVNKELNRLVHFTIKHVAED 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 693 IKHFALNRAIARMRELSNAISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKERLYNLSFPAFDE 768


>gi|33519776|ref|NP_878608.1| leucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|48428534|sp|Q7VRA6|SYL_BLOFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33504121|emb|CAD83383.1| leucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 867

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y  + + YP+   H+GH     I DV++R+ R+ G +VL   G D  G    +A
Sbjct: 30  KNKQKFYCLSMLPYPSGNLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEQA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N +  +     L  +YD    + T + +++   +  +  + +KG +
Sbjct: 90  AIIHKKNPSDWTYSNIQYMKQQLKSLGFAYDWKRELITNDPQYYRWEQWFFIILYEKGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         +++V  G         H  +Q+ +   +F +++ Y D+LL+ 
Sbjct: 150 YRKTTLVNWCPYHNTVLANEQVING----GCWRCHTKIQYKKIPQWFIKITHYADQLLNG 205

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                 +   ++          +G
Sbjct: 206 LNQLQYWPEQVKTMQRNWIGQSTG 229



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 19/181 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP  +I++ G DA+R+F++          + + G++       A      
Sbjct: 625 KMSKSKNNGIDPNAMIQKYGADAVRFFIMFAAPAHSTLEWKESGIEG------ALRFLKR 678

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           +       +++               + I       + ++ +++  +   + ALA ++ L
Sbjct: 679 LWNITYQHIQNGLIHQLNMYKLENKHKIIRQKVHETIIKVTDDIDRRQSFNTALAAIMKL 738

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            ++         P        DR      V  E +  +  LL  F P ++  ++  L   
Sbjct: 739 FND----IQDIFP---INNTQDR-----SVLHEALSIIVKLLYPFTPHISYILWKELGYT 786

Query: 481 D 481
           +
Sbjct: 787 N 787


>gi|39933364|ref|NP_945640.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|60390713|sp|Q6ND22|SYL_RHOPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39652989|emb|CAE25731.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 876

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RKKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G + +
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLQTMGLSLDWAREFATCDPSYYKHQQKMFLDFLKVGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 153 EKRKLNWDPVDMTVLANEQVIDG----RGWRSGAVVELREMNQWVFKITKYAQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +            GL   
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGLMVR 234



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 24/199 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G+K    +     +  
Sbjct: 631 EKMSKSKRNTVDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVKGA--SRFVQRLWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +V+ +  +           P +F     ++       L ++   ++    + +LA +   
Sbjct: 689 MVNDAAPIAAS---APAERPASFGADALTLRKAAHGALDKVLSGIERLAFNVSLAHIREF 745

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR----QLAILLQAFVPKLANKIFDI 476
            + +                  R+ T        IR     L  L    +P LA + + +
Sbjct: 746 SNTL-------------GDALARSQTPSPDLAWAIRESTVILVQLFHPMMPHLAEECWTV 792

Query: 477 LFVAD--ENRCFQSLDQRL 493
           L          +  ++Q L
Sbjct: 793 LGQTGLVSEALWPPIEQDL 811


>gi|289767980|ref|ZP_06527358.1| tRNA synthetase [Streptomyces lividans TK24]
 gi|289698179|gb|EFD65608.1| tRNA synthetase [Streptomyces lividans TK24]
          Length = 594

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 126/387 (32%), Gaps = 40/387 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +  ++      N   H+GH     + ADV +R  R+ G  VL+ +G D+H   +   A+
Sbjct: 94  RRFLVTATPPTTNGDLHVGHLSGPYLGADVFSRAQRMLGHTVLYASGGDDHQTYVVTTAE 153

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+       + +R      ++  I  D F    +  +    R  +  +   G +    
Sbjct: 154 RLGLDPVELAARCNREIVGTLELAGIDIDAFTSP-DDAYRAEVREFFTGLHRAGRLKTRT 212

Query: 124 YSGWYSLRDEAYYND-------DEVYKGADGQYYNAQHNP-------------------V 157
           ++  Y  R   Y  +        E   G  G       +P                    
Sbjct: 213 WTFPYCGRTGRYLLEAFATGYCPECLVGTCGAICENCGHPNDVDSLLFPASTGAGPAATT 272

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           Q  E E     L  Y+++   +Y      + P      V   +   L D  +S    DWG
Sbjct: 273 QPRETEILVLPLEEYREQFTEFYRVRRATMRP-HVLRFVDEMLSRPLPDFPVSYPA-DWG 330

Query: 218 IKIPDD--PQYIMYVWIDA--LTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           I +  D     +  VW +      ++           +    W AD     +  +G D  
Sbjct: 331 IPVGIDGFDGQVFNVWAEMLPGLRHMAEAARARRAPATPPGVWAADSGFELVQFLGYDNT 390

Query: 269 RFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            + A  +         L  P  + ++ F    G K S S  +++   +++ + G D +R+
Sbjct: 391 FYFAFAHLGLTFAHGGLTEPAAIVTNEFYHLDGAKFSTSRRHLVWARDLVGKYGADNVRF 450

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADL 354
            L  +    +   + +      V   L
Sbjct: 451 HLALDNPEHQPANFTEADFLDTVRTRL 477


>gi|168182292|ref|ZP_02616956.1| isoleucine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793417|ref|YP_002860969.1| isoleucyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674599|gb|EDT86560.1| isoleucine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262215|gb|ACQ53248.1| isoleucine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 1038

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYVLYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|330815527|ref|YP_004359232.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367920|gb|AEA59276.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 864

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K +  + + YP+ + H+GH     I DV+ R+ R++G + L   G D  G     A
Sbjct: 30  SQKPKFFCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   I T +  ++   + L+ K+ +KG  
Sbjct: 90  AMANGVPPAKWTYDNIAYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            ++  E   Y+ R++ Y D+LL  
Sbjct: 150 YKKTGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYLRITQYADELLDD 205

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 206 LDGLGWPERVKIMQQNWI 223



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 125/362 (34%), Gaps = 49/362 (13%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    + EA+ N      GA  +      +   +++   YF R +A     +       
Sbjct: 467 TGNPLAKSEAFLNCSCPKCGAPAKRETDTMD--TFVDSSWYFSRYTAPDATTMVD-ARTD 523

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   +   L     ++   D G+    +P   +      L      T Y
Sbjct: 524 HWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVL----NETFY 579

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++ +G K  F PAD+ V   D  R       A L     P+         +L   EK+S
Sbjct: 580 REDANGKKTWFNPADVTVTHDDKGRP----LGAVLNGDGQPV---------VLGGIEKMS 626

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N +DP  +I++ G D  R F +      +   +   G++         G    + R
Sbjct: 627 KSKNNGVDPQLLIDQHGADTARLFTMFAAPPEQQLEWSGAGVE---------GASRFLRR 677

Query: 365 SVSMILKDYDGMIP----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +    + + ++        A  E+ +++      VL++   + Q    +  ++  + +
Sbjct: 678 VWAFASANREALVTRDALDATALDETAKALRREIHAVLKQADFDYQRLQYNTVVSAAMKM 737

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++ +          E  K  P        V  E    L  +L   VP L   ++  L  A
Sbjct: 738 LNAI----------EGAKGAP------GAVLRETYGILLRVLYPVVPHLTFALWRELAYA 781

Query: 481 DE 482
           DE
Sbjct: 782 DE 783


>gi|316976560|gb|EFV59837.1| valyl-tRNA synthetase [Trichinella spiralis]
          Length = 880

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 133/415 (32%), Gaps = 91/415 (21%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            N   + V+ + +  ++ +         +   +    I+P         ++  G++D  +
Sbjct: 277 CNRSKDIVEPLLKAQWYVKCDEMAQNAAAAVRNGDMRIIPNIHEKTWYKWMS-GIRDWCI 335

Query: 210 SRKTFDWGIKIP----------------------------------------------DD 223
           SR+   WG +IP                                                
Sbjct: 336 SRQ-LWWGHRIPAYFVSIRGREKGNDACDDSWVVARTEAEAMQKAIKKFNVPQSEITLHQ 394

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLS 281
            + ++  W  +    ++  G+ +       +F+P  L   G DIL F    + +    L+
Sbjct: 395 DEDVLDTWFSSALFPISIFGWPNQTK-DLEEFYPGTLLETGYDILFFWVAKMVFLCQKLT 453

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI-------- 333
             LP              G K+SKSLGNVIDP++VI  + ++ L   L+           
Sbjct: 454 GKLPFTDIYLHSVIRDAHGRKMSKSLGNVIDPLDVINGISLEKLHNKLLSSNLDPAEVQR 513

Query: 334 ---ACGKD------------------------GFYDKDGLKKRVNADLANGIGNLVSRSV 366
                 +D                           + D L+ +      N I N     +
Sbjct: 514 AKEGQKRDYPNGIPECGTDALRFALCAYAAQGRDINLDVLRIQGYRHFCNKIWNACRFVM 573

Query: 367 SMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--S 422
             + KD+  +         TE D  ILS  S  ++   +  +N    +A     +     
Sbjct: 574 MTLGKDFKAEPEFKVNKMATEVDLWILSRLSTAVRLCNDAFENYEFSKATTACYNFWLYE 633

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  KP  ++  +P+  S    V    +     L+  F+P +A +++  L
Sbjct: 634 LCDVYLECIKP-VMRDADPEVQSATKRVLCFCVDSALRLIAPFMPFIAEELWQRL 687


>gi|255283087|ref|ZP_05347642.1| isoleucine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266389|gb|EET59594.1| isoleucine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 1045

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/403 (13%), Positives = 129/403 (32%), Gaps = 14/403 (3%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQH 154
            +   +    W+  +      +  +    +   E    ++            G++ +   
Sbjct: 386 PKFEHSYPHCWRCDTPLIYYARESWFIKMTAVKEDLIRNNNTINWIPESIGKGRFGDWLE 445

Query: 155 NPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL-SLSR 211
           N   W      ++      ++ +    +       L     NE    V+     +  ++ 
Sbjct: 446 NVQDWGISRNRYWGTPLNIWECECGHQHSIGSRQELYDLSGNEAAKTVELHRPYIDEITI 505

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
              + G ++   P+ ++  W D+         +         K +PA       D     
Sbjct: 506 TCPECGGQMHRVPE-VIDCWFDSGAMPFAQHHFPFENQDVFKKQFPAQFISEAVDQTRGW 564

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+++   + LL    P    +         G+K+SKS GN +DP E +E  G DA+R++ 
Sbjct: 565 FYSLLAESTLLFNKAPYENVIVLGHVQDENGQKMSKSKGNAVDPFEALETYGADAIRWYF 624

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
               A      +    +++     +           +   + ++D    T         D
Sbjct: 625 YINSAPWLPNRFHGKAVQEGQRKFMGTLWNTYAFFVLYANIDNFDATKYTLDYDKLPVMD 684

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAST 446
           + +LS  + ++Q +  +++N  I  A   +   V ++ + Y    +     K        
Sbjct: 685 KWLLSKMNTMIQSVDNHLENYRIPEAARALQDFVDDMSNWYVRRSRERFWAKGMEQDKIN 744

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                   +  +A      +P +   I+  L  + +    +S+
Sbjct: 745 AYMTLYTALVNVAKAAAPMIPFMTEDIYRNLVCSIDKSAPESV 787



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE             N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KEGPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRH 102
            +                       K  V +    + D +  +    D      T    +
Sbjct: 96  VEKQLGLDGKDQIEEYGLVPFIDKCKESVWKYKGMWEDFSGTVGFWADMEHPYVTYHDDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I +KG +YKG     Y  R     +  EV +G       +     +  +E
Sbjct: 156 IESEWWALKQIWEKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYKDVKERSAIVRFKVKDE 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DAYILAWT 223


>gi|126725111|ref|ZP_01740954.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706275|gb|EBA05365.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 1014

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/292 (19%), Positives = 106/292 (36%), Gaps = 10/292 (3%)

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWG-IKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
             R       ++ G   + L    F    I +  DP  ++  W  +    + T G+ +  
Sbjct: 549 KIRHTNSNRTIRVGWDTIELPSGKFKASEIGLCRDPD-VLDTWFSSGLWPIGTLGWPEQT 607

Query: 249 DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D    K++P    + G+DIL F    +      +   +P             KG+K+SKS
Sbjct: 608 DALD-KYFPTSTLITGQDILFFWVARMMMMQIAVVDEIPFDTVYLHGLVRDAKGKKMSKS 666

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVIDP+++I+E G DALR+      + G     D   +      +    + N  S   
Sbjct: 667 TGNVIDPLDIIDEFGADALRFTNASMASIGGALKLDTQRIAG--YRNFGTKLWNAASYGD 724

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
                        P      ++ I    ++ L  + + +     + A   + + V     
Sbjct: 725 FKGSFALPHTDNAPETKLPLNKWIKGEIAKTLATVDDALAAFRFNDAANALYAFVWGTFC 784

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +Y +  KP  L   +   A+  L      + Q  IL+   +P +  +I+  
Sbjct: 785 SQYLEYTKP-VLDGEDAAAAAETLATYAWALDQCLILMHPIMPFITEEIWGQ 835



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 19/174 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +           HIGHA+   + D+L R+ R+ G D L+  GTD  G       
Sbjct: 35  GKDSFSVMIPPPNVTGNLHIGHAFNNTLQDILIRWKRMQGFDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVTTK-----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
           +     T+                  +  ++     +    L  S  +D    T      
Sbjct: 95  ERKLAETQQPSRAEMGREAFLEKVWEWKAESGGTIINQLKRLGASCDWDREAFTMSGNFP 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           D    ++ ++ +KG IY+G     +    E   +D EV       +      P+
Sbjct: 155 DAVIKVFVEMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVAGHMWHFKYPL 208


>gi|108761325|ref|YP_632907.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465205|gb|ABF90390.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 831

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y+   + YP+ + H+GH    ++ DV AR+ R+ G DVL   G D  G     AA  
Sbjct: 33  PKKYVLEMLPYPSGKMHMGHVRNYLLGDVYARYFRMKGFDVLHPMGWDALGLPAENAAIK 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV   V   +N  +F+     L     +D  + T++  ++   +  + ++ ++G +Y+ 
Sbjct: 93  DGVHPAVRTAENIASFKKEIKSLGYCYDWDREVNTSDPEYYRWNQWFFIQMLERGLVYRR 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V  G          +PV   E   + FR++ +  +LL   ++
Sbjct: 153 FSKVNWCTGCHTVIANEQVKDG----VCERCDSPVVDKEMPEWAFRITRFSQELLDALDT 208

Query: 183 HPEFILPIERRNEVISFVKSG 203
             E+   I            G
Sbjct: 209 LKEWPHRITAAQRNWIGRSDG 229



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/371 (13%), Positives = 116/371 (31%), Gaps = 36/371 (9%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               +   G   Q Y     P+ + E+              L       +    +  + E
Sbjct: 418 VTYRQKDWGFSRQRYWGTPIPIVYCEKCDPDRNGIPVPVAQLPVRLPEIDTQAVLTGKGE 477

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW-IDALTNYLTTTGYLDNPDGSKAK 254
                 +   + S  +       +      ++   W      +                +
Sbjct: 478 PPLAKVASWVNTSCPKCGGPARREAETMDTFVDSCWYFARYLSPHYDAA--PFDPKEAQR 535

Query: 255 FWPADLHVIGKDILRFHAIYWPAFLLSANL--------PLPKKVFSHGFILHKGEKISKS 306
           F P D++V G +    H +Y+  +     L        P+ + +         G K+SK 
Sbjct: 536 FLPVDIYVGGPEHAVMHLLYFRFWTRVMKLLGLSPVDEPVKRLITQGIVNGPDGRKMSKR 595

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+ P  ++++ G D  R +++      +D  +  + ++         G+   + R  
Sbjct: 596 WGNVVAPASIVQKYGADTARAYVLFAGPPERDFDWSDEQVE---------GVYRFLKRVW 646

Query: 367 SMILKDYDGMIPTPGAFTESDE--SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           ++                   +   IL    + L+ + E ++    + A+A ++     +
Sbjct: 647 ALAATHQAAAAGATHDGPYEGKALEILRAAHKTLKRVGEAIERLSFNTAIAGIME---GL 703

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN- 483
           +  +    P           +       E +R LA++L  F P +A++I +     D   
Sbjct: 704 NALYALGTP---------ETAAEKAAMAEAVRLLAVVLTPFTPHIADEIAEAYGSKDFTV 754

Query: 484 -RCFQSLDQRL 493
            + +   D  L
Sbjct: 755 AQSWPEFDPAL 765


>gi|16329894|ref|NP_440622.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501028|sp|P73274|SYL_SYNY3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1652380|dbj|BAA17302.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 869

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA  
Sbjct: 33  PKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYQVLHPMGWDAFGLPAENAAIE 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K + ++N    R     L   I ++  + T    ++   + L+ +    G  Y+ 
Sbjct: 93  RGIPPKQWTEKNIAQMRAQLQQLGLSIDWEREVATCAPDYYRWTQWLFLEFFQAGLAYQK 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V          A    V+      +F +++ Y + LL+  E 
Sbjct: 153 EATVNWDPIDQTVLANEQVDSEGRSWRSGAM---VERKLLRQWFLKITDYAEALLNDLEQ 209

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   ++           G
Sbjct: 210 LTGWPERVKLMQSHWIGKSVG 230



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 36/207 (17%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   S   +    EK+SKS  N +DP EV+ + G D  R F++ +    KD  +D   +
Sbjct: 607 PKDPDSGEPLQVFYEKMSKSKFNGVDPQEVLAKYGADTARMFILFKAPPEKDLEWDDADV 666

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDG-----------MIPTPGAFTESDESILSVCS 395
           +         G    ++R   ++                  + T    T++++ +     
Sbjct: 667 E---------GQFRFLNRVWRLVTDYIGDPAGIRFAVRPETLVTNEPLTKAEKDLRRAIH 717

Query: 396 RVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             ++E+ E++  +   + A+++++ L + +           +  T+         V  E 
Sbjct: 718 GAIKEVAEDLNDDYQFNTAISEMMKLSNAL-----------IAATDL----ISFPVYQEG 762

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           I  L +LL  F P L  +++  L   D
Sbjct: 763 IETLLLLLAPFAPHLTEELWHRLGRTD 789


>gi|312135165|ref|YP_004002503.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775216|gb|ADQ04703.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 920

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 114/305 (37%), Gaps = 23/305 (7%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G    +    IM VW D+ +++             +   WP D+++ G D     F
Sbjct: 516 CPVCGCSEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    A       P    +     +  +G+K+SKS GNVI P ++I+E G D LR + V
Sbjct: 570 QSSLLTAVATKGRAPYKIVLTHGFVVDGEGKKMSKSEGNVISPFDIIDEFGADILRLWCV 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDE 388
                  D    KD +K+    ++   I N   R +   L D++      G     E D+
Sbjct: 630 SADYTT-DMRISKDIIKQL--TEIYRKIRNTA-RFLLGNLFDFNPKTDKVGYENLKEIDK 685

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRAS 445
             L     +++++ +  +    ++    V +   +   + Y D  K      K+      
Sbjct: 686 WALQRLYTLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRR 745

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFML 499
               V  E++  L  L+   +   A +I+  +   +EN        +  +++ +     L
Sbjct: 746 AAQTVMYEILVALTKLIAPILSFTAEEIWQNIAYKEENVESVFLTSWPKVNEGILKDETL 805

Query: 500 HKTFD 504
            + +D
Sbjct: 806 REKWD 810



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R     L +   +++   T + +     
Sbjct: 105 VIKKLGVNRHEVEPVEFRKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTY 207


>gi|307297022|ref|ZP_07576838.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306877548|gb|EFN08776.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 838

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ + Y+     YP+ + HIGH     + DVLARF R+ G +VL   G D  G     A
Sbjct: 30  SEKPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLARFRRMTGHEVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N  N +     L  + D    + T    ++   + L+  + + G +
Sbjct: 90  AMEKKVHPGKWTYENIANMKAQLKKLGFALDWSREVATCHPDYYGHEQALFLDMLEAGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G           PV+  +   +F +++ + D LL+ 
Sbjct: 150 YRKESAVNWDPVDMTVLANEQVIDGKG----WRSGAPVEKRKLSQWFLKITQFADDLLAG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ++  ++   +    E       GL+
Sbjct: 206 LKTLDQWPEKVRLMQENWIGKSVGLQ 231



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 125/390 (32%), Gaps = 68/390 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFV 200
            G   Q Y     PV   E+ G           +L    S      P++R    + +   
Sbjct: 423 WGVSRQRYWGTPIPVIHCEDCGPVGVPKDQLPVVLPEDVSFDIPGNPLDRHPTWKHVDCP 482

Query: 201 KSGLKDLSL----------SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
             G                S     +  +  D P     V                    
Sbjct: 483 TCGKPARRETDTLDTFADSSWYFIRFASQPKDKPFDRETVEKWLPVGQYIGGVEHAILHL 542

Query: 251 SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGF------------- 295
             A+FW   L  +G+      F  ++    +       P   +                 
Sbjct: 543 LYARFWTRALQHMGQIGFAEPFTGLFTQGMVTHETYKSPDGAWLAPQEVERQGDRIVMVG 602

Query: 296 -----ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                 L + EK+SKS  NV+DP ++I + G DA+R+F++ +    +D  + + G++   
Sbjct: 603 TGAPVTLGRVEKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPERDLPWTEAGIEGSW 662

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                    N + R      K  +G           D+++     + +  + ++++    
Sbjct: 663 R------FINRLWRLFGEADKGAEGQ----------DKTLDRKLHQTIDGVAKDIEALSF 706

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++A+A++  L + V            +K  P  + +        IR LA+L+    P LA
Sbjct: 707 NKAVAKIYELTNAV------------EKAKPSASRSA------AIRALALLVAPMTPHLA 748

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            + +  +   ++    ++    + P  ++ 
Sbjct: 749 EEAWADMG--EQGLIAEAAWPAVDPALLVE 776


>gi|324503594|gb|ADY41558.1| Leucyl-tRNA synthetase [Ascaris suum]
          Length = 876

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 5/204 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I+DV+AR++RL G +V+   G D  G     AA   
Sbjct: 62  KKYILSMFPYPSGNLHMGHMRVYTISDVIARYYRLSGFNVIHPMGWDAFGLPAENAAVER 121

Query: 66  GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  + +   N +  R+      I   +D  I T    ++   + ++ ++ D G +Y+  
Sbjct: 122 GVDPEEWTHSNIKTMREQLLKTGIIFDWDREILTCSPEYYRWTQWIFCRLYDHGLVYRSL 181

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
               +   D      +++    +           +  + + +      Y  +LL   +  
Sbjct: 182 AEVNWDPVDCTVLAAEQI---DENGRSWRSGAIAEKRKLKQWVVETPRYAKRLLEGLQKM 238

Query: 184 PEFILPIERRNEVISFVKSGLKDL 207
           P +    E +   I         L
Sbjct: 239 PHWQEVAEIQANWIGKCDVWRFRL 262



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 109/338 (32%), Gaps = 78/338 (23%)

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD-- 249
           R +E+     +G     +       G  IP+     +  + D+   YL      ++ +  
Sbjct: 429 RDDELPVCASTGGHPQRIPCNRLPSGFGIPETD--TLDTFFDSSWYYLRYLDPKNDKELI 486

Query: 250 -GSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPL----PKKVFSHGFI 296
              K    P D+++ G +    H  +        N         P     P+ V      
Sbjct: 487 AADKVAQMPVDVYIGGIEHAAVHMFFARFISYFLNDIGVTKSVEPFDQLLPQGVVRGRTF 546

Query: 297 L------------------------------HKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           L                               + EK+SKS  N ++P+ V++  G+D  R
Sbjct: 547 LRTDNGKYVPEADVIQKESTFAEKSDGGEVIMQYEKMSKSKHNGVEPLLVLDRDGIDLTR 606

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
             L+   A      +     K         G+   ++R   ++ +       +     E+
Sbjct: 607 LQLLSSAAPRAPVNWGDADTK---------GLKKWLNRVSWVVNEYVTQRSVSSPNCLEA 657

Query: 387 DES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           D +       V +  ++ +   ++   +H     +  L+   +          L+K    
Sbjct: 658 DSATEAHYREVYNYAVRNVSMLLEVLHLHN--TAIARLIGLTN---------SLRKAE-- 704

Query: 443 RASTVLYVTVEV---IRQLAILLQAFVPKLANKIFDIL 477
             +++   +VEV   +  L I++Q F P  A +++  L
Sbjct: 705 --ASLFGRSVEVERCVHALVIMMQVFTPHTAAELWSAL 740


>gi|51599084|ref|YP_073272.1| isoleucyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81825610|sp|Q65ZU1|SYI_BORGA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51573655|gb|AAU07680.1| isoleucyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 1042

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 132/395 (33%), Gaps = 19/395 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+  Y   Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTQLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQY 226
              +      ++ +     +  +   ++    +  L++LS  +        I     P  
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSRKELEELSGQKIEDLHKDKIDKITWPSK 506

Query: 227 ----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFANESNFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP+EVI   G DALR +L+    
Sbjct: 567 ILGTSLFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPTKNLSLVKSNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + + + +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNKEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              I+ L ILL  F+P +  +I+  L   ++ +  
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSI 781



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M++RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MEQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMKGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIILRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDISFMESVWWVFKNLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|166154240|ref|YP_001654358.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|301335489|ref|ZP_07223733.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|259511499|sp|B0B9C6|SYI_CHLT2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|165930228|emb|CAP03713.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis 434/Bu]
          Length = 1036

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    +L + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDRWILSSLYSLLGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSTDRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P ++  ++  L    +   
Sbjct: 751 IAPFIPFISEDMYQQLRGETDPES 774



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 90/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVVKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +     A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELGAFRILPADFIEESEGTGIVHM 321


>gi|316931732|ref|YP_004106714.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315599446|gb|ADU41981.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 876

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RKKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGYNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G + +
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLQTMGLSLDWAREFATCDPSYYKHQQKMFLDFLKVGLVER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   +
Sbjct: 153 EKRKLNWDPVDMTVLANEQVIDG----RGWRSGAVVELREMNQWVFKITRYAQELLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
           +   +   +            GL   
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGLMVR 234



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 22/182 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G+K    +     +  
Sbjct: 631 EKMSKSKRNTVDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVKGA--SRFVQRLWR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +V+ +  +          + GA       +       L ++   ++    + +LA +   
Sbjct: 689 MVNDAAPIAAAAPAERPASFGADALG---LRKAAHGALDKVLSGIERLAFNVSLAHIREF 745

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR----QLAILLQAFVPKLANKIFDI 476
            + +                  R+ T        IR     L  L    +P LA + + +
Sbjct: 746 SNTL-------------GDVLARSQTPSPDLAWAIRESTMILVQLFHPMMPHLAEECWSV 792

Query: 477 LF 478
           L 
Sbjct: 793 LG 794


>gi|282897916|ref|ZP_06305911.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197060|gb|EFA71961.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 859

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 34  KNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    R     L +S D    + T    ++   + ++ +    G  
Sbjct: 94  AIDRGVPPAKWTYQNINQMRQQLQRLGLSLDWEAEVATCSPDYYRWTQWIFLQFLAAGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+      +F +++ Y ++LL+ 
Sbjct: 154 YQKEAAVNWDPIDQTVLANEQVDSE---GRSWRSGAIVERKMLRQWFLKITDYAEELLND 210

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++          +G
Sbjct: 211 LDQLSGWPERVKIMQANWIGKSTG 234



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 112/324 (34%), Gaps = 72/324 (22%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y          D SK   W P D +V G +    H +Y   
Sbjct: 493 KRETDTMDTFIDSSWYFLRYTDAKNQQQIFDNSKVNDWMPVDQYVGGIEHAILHLLYSRF 552

Query: 278 FL--------LSANLPLPKKV-------FSHGFILHKGEK-------------------- 302
           F         L+ N P  K +        ++      G+                     
Sbjct: 553 FTKVLRDRGLLNFNEPFQKLLTQGMVQGLTYMNPNKNGKDKWVPSHLVDPTNPVDPHTGE 612

Query: 303 --------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                   +SKS GN + P +VI + GVD  R F++ +   GKD  +D+  ++ +     
Sbjct: 613 PLQRLYATMSKSKGNGVAPEDVIAKYGVDTARMFILFKAPPGKDLEWDEADVEGQFR--F 670

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRA 413
            N +  LV+   +M +             T  ++ +       ++ I E+++     + A
Sbjct: 671 LNRVWRLVNDYANMGVCG---KKVDLEKLTREEKDLRRAVHSGIKAITEDVEDEYQFNTA 727

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +++++ L + +                  +      V  E I+ L I+L  F P +A+++
Sbjct: 728 ISELMKLSNALS---------------DAKCHN-SPVYAEGIKTLVIMLAPFAPHIADEL 771

Query: 474 FDILFVADENRCFQSLDQRLKPGF 497
           +++L          S+ Q+  PGF
Sbjct: 772 WNLLGNK------SSVHQQGWPGF 789


>gi|170756964|ref|YP_001779726.1| isoleucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169122176|gb|ACA46012.1| isoleucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 1038

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYVLYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEHFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|322804370|emb|CBZ01920.1| isoleucyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 1038

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYVLYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|34580499|ref|ZP_00141979.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261884|gb|EAA25388.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 835

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N +N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKKWTYSNIKNMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V     + +F +++ Y ++LL+ 
Sbjct: 144 YQKESFVNWDPVDNTVLANEQVVDG----RGWRSGAIVAKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 126/389 (32%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEICGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFTRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVQEPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N +  +     S+               +E ++ +  +    ++ + E+
Sbjct: 645 GIEG--CSRFINKLEYMFKAIDSL----------KDDVNSEVNKELNRLVHFTIKHVAED 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 693 IKHFALNRAIARIRELSNAISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKERLYNLSFPAFDE 768


>gi|99079886|ref|YP_612040.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379171|sp|Q1GKN8|SYL_SILST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|99036166|gb|ABF62778.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 857

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 86/241 (35%), Gaps = 7/241 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  SKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T +  ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y D+LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERRELTQWFFKISDYSDELLEAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
           +    +   +    E       GL   S  R   +  I++       +        +   
Sbjct: 206 DGLENWPAKVRLMQENWIGKSRGL-QFSFERTDGEEAIEVYTTRPDTLMGASFVGISPDH 264

Query: 241 T 241
            
Sbjct: 265 P 265



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 75/192 (39%), Gaps = 31/192 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 628 KMSKSKNNVVDPLAIISTYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 685

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M           P A  E DE +L    + ++++   +++   + A+A++    
Sbjct: 686 CDRIGEM----------DPDAKGEGDEELLREMHKAIRDVTLGVESFGFNAAIAKLYGFT 735

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +             L K+    A     V  + I+ LA L+    P LA  I+       
Sbjct: 736 N------------TLSKSKASAA-----VQKQAIKTLAQLMSPMTPHLAEDIWAHQGGEG 778

Query: 482 --ENRCFQSLDQ 491
              N  +   D+
Sbjct: 779 LIANAAWPVADE 790


>gi|303238789|ref|ZP_07325321.1| isoleucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593668|gb|EFL63384.1| isoleucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 1039

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/466 (13%), Positives = 144/466 (30%), Gaps = 26/466 (5%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY---DDF 94
                 D+ F    ++ G  I       G+  K    +   +     +  ++ Y   D  
Sbjct: 328 KVGREYDLPFLQAVNDRGNFIEAVTPWKGMFVKDADPKIIEH----LEGRNLIYKKLDYE 383

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD----GQYY 150
                   +  C      +          +    +++D+   N++++    D    G+  
Sbjct: 384 HS------YPFCWRCDTHLL--YYAMDTWFVKMTAVKDKLLKNNNKINWLPDNIREGRMG 435

Query: 151 NAQHNPVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           N   N V W       +   L  ++ +    +       L     N             +
Sbjct: 436 NFLENVVDWGLSRSRYWGTPLPIWECECGHRHVIGSIAELKEMGENVPDDIELHKPFIDN 495

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           +  K              ++  W D+ +       Y           +PAD      D  
Sbjct: 496 VFLKCPKCNTGKMKRVSEVIDCWFDSGSMPFAQWHYPFENQEIFKDNYPADFISEAIDQT 555

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F+ +   + LL         +         G K+SK  GNV+DP  V+++ G DA+R
Sbjct: 556 RGWFYTLLAISTLLFDEPAFKNVIVLGHVNDKDGIKMSKHKGNVVDPWTVLDKQGADAVR 615

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
           ++     A      + ++ + +     +           +   +  +D           +
Sbjct: 616 WYFYINSAPWLPNRFYEEAVSESQRKFMGTLWNTYAFYVLYAGIDQFDPKQYKLEYEKLS 675

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDR 443
             D+ +LS  + ++  + +N+ N  I  +   +     ++ + Y    +    +K     
Sbjct: 676 VMDKWVLSKMNTLIATVDKNLANYRITESARAIQEFTDDLSNWYVRRSRERFWQKDMTQD 735

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                     V+ QL  +   FVP +A +I+  L    ++   +S+
Sbjct: 736 KINAYMTLYTVLVQLITVSAPFVPFVAEEIYSNLVRNIDSNAPESV 781



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  E           N +PHIGH    +I D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EGGETFTFYDGPPTANGKPHIGHILTRVIKDIVPRYKTMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRH 102
            +                       K  V +    +  M+D +    D      T +  +
Sbjct: 96  VEKLLGIDGKPEIEKFGVEPFIANCKKSVWKYKGEWEQMSDRVGYWADMEEPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I D+  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKRIWDQDLLYKGHKIVPYCPRCGTSLSSHEVAQGYK 199


>gi|255536397|ref|YP_003096768.1| Valyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342593|gb|ACU08706.1| Valyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 882

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 129/364 (35%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++S      L    +      P + +N         ++D ++SR+   W
Sbjct: 360 IEPKVSVQWFLKMSEIAKPALDVVMNDEVKFHPEKFKNT-YRHWMENIRDWNISRQ-LLW 417

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                            +  W  +    
Sbjct: 418 GQQIPAYFYGEGENDFVVAETIEEALELAKEKSQNSNLEISGLRQDADALDTWFSSWLWP 477

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    + +P+      ++P    V G DI+ F    +          +P     F+   
Sbjct: 478 ISVFDGMLDPENKDINYYYPTSDLVTGPDIIFFWVARMIMAGLEYRKEVPFKNVYFTGIV 537

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  DPIE++E+ G D +R  ++   A G D  +D++ + +    + A
Sbjct: 538 RDKQRRKMSKSLGNSPDPIELMEKYGADGVRVGILLSSAAGNDLLFDEELMLQ--GRNFA 595

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I N       M   + +  I    A  ++ E       + + EI +      I  AL 
Sbjct: 596 TKIWNAYR---LMQGWEKNEAIKATAADNQAIEWFGHQMDKTIAEIADQFAKFRISDALH 652

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V  L+ +     Y +A KP       P  A  V   ++E   +L  LL  F+P L+ ++
Sbjct: 653 LVYKLIWDDFCSWYLEAVKP---AFGEPVSAE-VYGKSIEYFEELMKLLHPFMPFLSEEL 708

Query: 474 FDIL 477
           +  +
Sbjct: 709 WQNI 712



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 22/180 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           E+    I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 42  EKPPYTIVIPPPNVTGILHMGHMLNNTIQDVLVRRARMQGFNACWVPGTDHASIATEAKV 101

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRH 102
                           +        + D+      +    L  S D     F  T E + 
Sbjct: 102 VAKLKEEGISKADISREEFLKHAWEWTDKYGGTILEQLKKLGCSCDWARTRF--TMEPKL 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                  +  + +KG IY+G     +    +   +D+EV               ++  EE
Sbjct: 160 SQQVIKSFVDLYNKGLIYRGYRMVNWDPEAKTNISDEEVIFKEQNGKLYFLKYKIEGTEE 219


>gi|269119362|ref|YP_003307539.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613240|gb|ACZ07608.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 865

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 101/236 (42%), Gaps = 9/236 (3%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++E  YI    AYP+   H+GH     I D +AR+ ++ G +VL   G D  G     
Sbjct: 28  VSDKENYYILEMFAYPSGNLHVGHLRNYTIGDAIARYKKMKGFNVLHPFGWDSFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA         +  +N  N +    ++ IS+D    + T ++ ++   + ++ K+ +KG 
Sbjct: 88  AAIENKAHPGDWTRKNIDNMKRQLKLMGISHDWSRELATYQENYYKWNQWMFIKMYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +         +++V    DG+ +      V   E + ++F+++ Y ++LL 
Sbjct: 148 VYKKKSYVNWCPECNTVLANEQV---EDGKCWRHSKTDVIQKELDQWYFKITDYSEELLQ 204

Query: 179 YYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            ++    + P+ ++ +++     S+       L   +         PD    + YV
Sbjct: 205 SHDDLAGNWPDKVITMQKNWIGKSYGTEIDFVLEDGKTKIPAFTTRPDTLYGVTYV 260



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 13/177 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +++E G D+ R F +      K+  ++ +GL         N +  
Sbjct: 616 EKMSKSKNNGVDPEVIVKEYGADSARVFSLFAAPPEKELEWNMNGLAGAYR--FLNRLFL 673

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVIS 419
           L+  +        +      G     D  I     + ++++ E+M+ N   + A+A ++ 
Sbjct: 674 LIEDTKEFS----EAGEIDHGKRNNEDSEIQKKLHQTVKKVSESMEDNFHFNTAIAALME 729

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           L++++  Y   QK  +  K + +       +  EV+ +  ++L  F P +A++++  
Sbjct: 730 LLNDMTSY--RQKVIDTGKISSESKK----IWREVMEKTVLMLSPFAPHIADELWSA 780


>gi|153952361|ref|YP_001398297.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939807|gb|ABS44548.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 870

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 72/441 (16%), Positives = 141/441 (31%), Gaps = 28/441 (6%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           E G  + K      +       +++  F  + D   I  +  +        +    +  K
Sbjct: 262 EFGTGVVKVTPAHDMNDYEVGLRHNLEFISIFDEKGILNEHCLEFQGLERLEAREKIVAK 321

Query: 113 ISDKGDIYKGC----YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +   G + K        G+    +               +        V   E + Y   
Sbjct: 322 LESLGFLEKIEEYNNQVGYCYRCNNIVEPYISKQWFVKKEIAQESIKKVALGESKFYPNH 381

Query: 169 L--SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
              S                +    +                  +       +     + 
Sbjct: 382 WINSFNAWMKDLRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDED 441

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWP 276
           ++  W  +    ++T G+ +   G    +        +P  L + G DIL F    + + 
Sbjct: 442 VLDTWFSSGLWAMSTLGWGNENWGKDKIWSENDLKDFYPNSLLITGFDILFFWVARMMFQ 501

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +      LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G
Sbjct: 502 STNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQG 561

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D     D L +  N    N I N  +  +    K  D    T    +E  + I +    
Sbjct: 562 RDIKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYAKFQT 617

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++++REN+ N   + A   +         ++D    W ++ +  +++S  +     + +
Sbjct: 618 CVKDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFK 669

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           +   LL  F+P ++  ++  L
Sbjct: 670 EALKLLNPFMPFISEYLYHKL 690



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKVWEWKEQSGGKILDQMKTLGITPAWSRLRFTMDEGLA 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|257790203|ref|YP_003180809.1| leucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257474100|gb|ACV54420.1| leucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 859

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+   H+GH     I DV+AR++++ G DVL   G D  G     AA
Sbjct: 32  SKSKKYVLEMFPYPSGDIHMGHVRNYTIGDVVARYYKMRGFDVLHPMGWDAFGLPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT---TEKRHHDTCRILWKKISDKGDI 119
                    +   N    +     +  SYD + RT    +  ++   + ++ +   +G +
Sbjct: 92  IKCNSHPAKWTYANIDTQKASFKRMGFSYD-WDRTVVACDPEYYRWGQWIFLQFWKRGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +         +++V +G         H  V+  +   ++F+++ Y  +LL  
Sbjct: 151 ERRNSPVNWCPNCATVLANEQVTEGE----CWRCHGAVEKRDLTQWYFKITDYAQELLDD 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +++          G
Sbjct: 207 LDQLDGWPERVKQMQANWIGRSEG 230



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 97/277 (35%), Gaps = 25/277 (9%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y             KA  W P D ++ G +    H +Y   
Sbjct: 515 KRETDTMDTFTCSSWYYLRYTDPHNEELPFAPEKANRWMPVDQYIGGIEHAILHLLYSRF 574

Query: 278 FL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +         L  + P    +         GE +SKS GNVI P ++I E G DA+R ++
Sbjct: 575 YTKVLRDLGLLEFDEPFSNLLCQGMVKDEHGETMSKSKGNVIAPEDMIAEYGADAVRAYI 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-- 387
           +      KD  +D+ GL             N   R V+ ++   D         +E +  
Sbjct: 635 LFMAPPDKDLLWDEGGLAG------IYKFMNRAWRIVNDLMGAADEETLYQPGASEDEGI 688

Query: 388 ---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
              E ++    RV+ ++ ++      + ALA ++ L +    Y     P E       RA
Sbjct: 689 KALEQLVRERHRVVGKVVDDFDRNNFNTALAAIMELTNAASDYLRKCSPEERAGCEGSRA 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                V  EV   L  LL  F P  A +++  +   D
Sbjct: 749 -----VDAEVAEVLVKLLAPFAPHWAEELWHAVLGKD 780


>gi|256378249|ref|YP_003101909.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
 gi|255922552|gb|ACU38063.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
          Length = 645

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 100/533 (18%), Positives = 184/533 (34%), Gaps = 43/533 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++  +      PN   H+GH A   + ADVL R  R  G D    TGTD+H   +A +A+
Sbjct: 127 QRALVFCPPPTPNGGLHLGHLAGPYVRADVLVRALRSTGRDARHVTGTDDHQSHVAVSAR 186

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWKKISDKGDIYKG 122
             G T +     +            +  D   R  T   H D  R L  ++++   + + 
Sbjct: 187 LGGATPEQVAASHGEAILATLRAAGVDCDRLTRPATAPGHADRIRELITRLAESPSVTEQ 246

Query: 123 CYSGWYSLRD-----EAYYNDDEVYK--GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                Y         +A+      +    +DG+   A   P +  +      RL      
Sbjct: 247 ERDTAYCAACDLSLHQAFARGACAHCAADSDGEICEACGRPNEAKDLVDPRCRLCGGPAT 306

Query: 176 LLSYYESHPEFILPIERRNEVISFVK--------------SGLKDLSLSRKTFDWGIKIP 221
                    +     E+    +                   GL    L+R+  DWG+++ 
Sbjct: 307 TRPERALWLDMSAHAEQLARYLKDSHTSPDLLALVERLLADGLPPYRLARRA-DWGVELA 365

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL-HVIGKDILRFHAIYWPAFLL 280
                 +  W+D          +LD       +  PA +   +G D   F+A+  PA   
Sbjct: 366 --DGQRVDAWVDLALT------FLDAARAETEQDGPAKITLFLGYDNSFFYAVLLPAVAF 417

Query: 281 SANL--PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +A L   LP    ++ F+     K S S G+ I     + E G DA+R  L+R    G+ 
Sbjct: 418 AAGLAEHLPAAFVTNQFLHLDDAKFSTSRGHAIWADPALAEAGPDAVRLALLRNAPEGRV 477

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                   ++R      + +       ++      DG++P  GA+T++        +   
Sbjct: 478 TRIT----QERAALLAQDPLHLAAKEWLAGFAGVGDGVVPGTGAWTDAHREFYRNLNLTT 533

Query: 399 QEIRENM--QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++   +  ++      +  + + V     +   ++P     +  + A T L +     +
Sbjct: 534 RQLDGLLIPESFSARGYVRLLEAFVERAAEFRATEEPLRAVPSLAEEARTSLALDHLAAK 593

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
             A L     P LA + +  L +  E    +  D    PG     +  P+  R
Sbjct: 594 AFAALAWPITPDLALRTWRWLGLPGEP--VREADWSFLPGGTRVTSPSPLDAR 644


>gi|262281236|ref|ZP_06059018.1| valyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257467|gb|EEY76203.1| valyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 965

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/409 (16%), Positives = 138/409 (33%), Gaps = 97/409 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++ +++   +  +   +      +P +  N  +++++  ++D  +SR+   W
Sbjct: 380 IEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYMAWMRD-IQDWCISRQ-LWW 437

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 438 GHRIPAWYDANGNIYVGRNEEEVRAKNNIAADVELKQDEDVLDTWFSSALWTFSTLGWTG 497

Query: 247 NPDGSKAKFW-----PADLHVIGKDILRFHAIYWPAFLLSANLPLPKK-----------V 290
           +        +     P D+ V G DI+ F    W A ++   L   K            V
Sbjct: 498 DAKQDDVNDFLKTFHPTDVLVTGFDIIFF----WVARMIMMTLHFMKNEDGSSQVPFKTV 553

Query: 291 FSHGFILH-KGEKISKSLGNVIDPIEVIEE------------------------------ 319
           + HG +   +G+K+SKS GNV+DP+++I+                               
Sbjct: 554 YVHGLVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKIEKSTRKE 613

Query: 320 -------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
                   G DA+R+        G+D  +D   ++     +  N I N     +  +   
Sbjct: 614 FPEGINAYGTDAVRFTFCALANTGRDIKFDLKRVEG--YRNFCNKIWNATRFVLMNVEGQ 671

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
             G    P  +   ++ I+S   +    + +      +  A   +   +     D Y + 
Sbjct: 672 TVGQEARPDLWELPEQWIMSRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCDWYVEL 731

Query: 431 QKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            KP  L       +R + V  V + V+     L    +P L  +I+  L
Sbjct: 732 TKP-VLNDPEVAEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTL 779



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH +   I D L R++R+ G + L+  GTD  G       + 
Sbjct: 40  ESFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVER 99

Query: 65  A--------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       ++  R +   +D S + F  T ++   +
Sbjct: 100 QLGLQGVTRHDLGRDKFIEKVWEWKEQSGGTITKQIRRLGSSVDWSRERF--TMDEGLSN 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 158 AVKEVFVRLHEDGLIYRGKRLVNWDPKLQTALSDLEVESKEEKGSLWH 205


>gi|218263088|ref|ZP_03477326.1| hypothetical protein PRABACTJOHN_03007 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222962|gb|EEC95612.1| hypothetical protein PRABACTJOHN_03007 [Parabacteroides johnsonii
           DSM 18315]
          Length = 600

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 112/301 (37%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P E   E    +      +       + G  +  +   ++ VW D+         Y  
Sbjct: 30  FQPGEYTKENYEKIDLHRPYVDDVILVSESGKPMKRETD-LIDVWFDSGAMPYAQIHYPF 88

Query: 247 NP--DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    K +PAD    G D     F  ++  A ++  ++     V +   +   G K
Sbjct: 89  ENKEIFDDRKVYPADFIAEGVDQTRGWFFTLHALATMVFDSVSYKAVVSNGLVLDKNGNK 148

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 149 MSKRLGNAVDPFATIEQYGSDPLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYS 208

Query: 363 SRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  +D   P        E D  ILS+ + +++++   +      RA   +   
Sbjct: 209 FFALYANVDGFDYSEPDVDWKERPEIDRWILSLLNSLVKDVDGFLDTYEPTRAGRAISDF 268

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+++F  
Sbjct: 269 VNDNLSNWYVRLNRRRFWGGGMT-TDKLSA-YQTLYTCLETVAKLMAPIAPFYADQLFCD 326

Query: 477 L 477
           L
Sbjct: 327 L 327


>gi|254571747|ref|XP_002492983.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia
           pastoris GS115]
 gi|238032781|emb|CAY70804.1| Mitochondrial and cytoplasmic valyl-tRNA synthetase [Pichia
           pastoris GS115]
          Length = 1072

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 128/373 (34%), Gaps = 45/373 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y  + E  +  E   +     +S  +    +   F   I   +  
Sbjct: 531 WCISRQLWWGHRCPVYFVNIEGEVNDENDGQYWVSGRSLEEAQEKASAKFAGKIFTLEQD 590

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ DN    K +F+P  +   G DIL F    +      L+ 
Sbjct: 591 EDVLDTWFSSGLWPFSTLGWPDNTPDMK-QFYPFSMLETGWDILFFWVTRMILLGLKLTG 649

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
           ++P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      ++   
Sbjct: 650 DVPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVINGISLEDLHAKLLGGNLDPREVEK 708

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I       +
Sbjct: 709 AKKGQKESYPSGIPECGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFVL 768

Query: 367 SMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--S 422
             +  DY         G  +  +  IL   S+  + + E+++ +    A   +       
Sbjct: 769 MRLGDDYKPPATGDLTGKESLVERWILHKLSKASKVVNESIEKRDFFEATNAIYQFWLYE 828

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  K + + +   D+  +        I     L+  F+P L  +++  L   + 
Sbjct: 829 LCDVYIENSK-YLITEGTADQKKSAQDTLFTCIDAALKLIHPFMPFLTEEMWQRLPRREA 887

Query: 483 NRCFQSLDQRLKP 495
            +   S+ +   P
Sbjct: 888 EKSIISISKAPYP 900



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + + D L RF+R+ G   L+  G D  G       + + 
Sbjct: 150 FSIPAPPPNITGALHIGHALTIALQDTLIRFYRMKGKTTLYLPGFDHAGIATQSVVEKSL 209

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + D      R   + L  SYD      T          
Sbjct: 210 WAQEGKTRHDLGREKFIEKVWDWKDVYQNRIRSQFEKLGASYDFSREAFTLNPMLSKAVT 269

Query: 108 ILWKKISDKGDIYK 121
             + ++ + G IY+
Sbjct: 270 EAFVRLHEDGTIYR 283


>gi|149928114|ref|ZP_01916361.1| leucyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823200|gb|EDM82437.1| leucyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 881

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 90/235 (38%), Gaps = 7/235 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y  + + YP+ + H+GH     I DV+ R  R+ G + L   G D  G     A
Sbjct: 36  KQKPKYYCVSMLPYPSGKLHMGHVRNYTINDVMIRQKRMKGYNTLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     +   N    +   + +   I +   + T +  ++   + L+ K+ +KG +
Sbjct: 96  AMANGKPPAAWTYSNIDYMKKQMESMGLAIDWSKEVATCKPDYYKWNQWLFLKMLEKGIV 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            V+  +   Y+  ++ Y D LL  
Sbjct: 156 YKKTGTVNWDPIDQTVLANEQVIDGKG----WRSGAVVEKRDIPMYYMAITDYADVLLED 211

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
             +  ++   ++   E      +G++           G  + +   Y+     D 
Sbjct: 212 L-NGLQWPDRVKVMQENWIGKSTGVRFAFPHEIKNTAGELVQEGKLYVFTTRADT 265



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 120/345 (34%), Gaps = 41/345 (11%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E      G+    + + +    +  ++F      D      E    ++   +    +   
Sbjct: 491 ECKCPKCGKPARRETDTMDTFVDSSWYFTRYVCNDANTMTDERSDYWMPMDQYIGGIEHA 550

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           +   L     ++   D G+    +P   +      L      T Y +  +G K    PAD
Sbjct: 551 ILHLLYSRFWTKVMNDLGLVKFHEPATALLTQGMVL----NDTYYTEEANGKKTWINPAD 606

Query: 260 LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + V   D  R       A L ++  P       H   +    K+SKS  N IDP  +I++
Sbjct: 607 VSVEFDDKGRP----VSAKLSNSGAP------VHIGGVE---KMSKSKNNGIDPQALIDQ 653

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R F +      +   +   G++         G    + R   + L   + +   
Sbjct: 654 YGADTARLFTMFAAPPEQSLEWSDSGVE---------GAHRFLKRLYQLALNQQEAIKAQ 704

Query: 380 PG----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           P       +++ ++       +L++   +      +  ++  + +++ +D +  A +P  
Sbjct: 705 PALNATELSKAAQNTRRDVHEILKQANFDYDRHQYNTVVSAGMKMLNTLDAF--ANEP-- 760

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             K+  D+A     V VE +  L  +L   VP +   ++  L  +
Sbjct: 761 --KSPADQA-----VLVEGLSILLRVLYPIVPHITCHLWASLNYS 798


>gi|291556445|emb|CBL33562.1| isoleucyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 1049

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/448 (15%), Positives = 137/448 (30%), Gaps = 16/448 (3%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT 97
                 D+ F    D  G   A+          +FV +         D   + +D     
Sbjct: 340 KVGRKYDLPFVQLVDGKGNMTAETPYAG-----IFVKKADPMVLKDLDEKGLLFDAPKFE 394

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               H   C       + +    K        +R+    N      G +      ++  V
Sbjct: 395 HSYPHCWRCDTPLLYYARESWFIKMTAVKDDLIRNNETINWIPESVGKNRFGDWLEN--V 452

Query: 158 QWMEEEGYFFRLSA---YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           Q        +  +    ++ +    +       L     N             +++ K  
Sbjct: 453 QDWGLSRNRYWGTPLNIWECECGHKHAIGSIEELKSMSDNCPDDIELHRPYIDAVTIKCP 512

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G ++   P+ ++  W D+ +       Y         + +PAD      D     F++
Sbjct: 513 HCGKQMKRVPE-VIDCWFDSGSMPFAQHHYPFENKEKFEQQFPADFISEAVDQTRGWFYS 571

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   + LL    P    +     +   G+K+SKS GN +DP E + E G DA+R++    
Sbjct: 572 LLAISTLLFNKAPYKNVIVLGLVLDKDGQKMSKSKGNAVDPFESLAEHGADAIRWYFYTN 631

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESI 390
            A      +    + +     ++          +   + ++D    T  A      D+ +
Sbjct: 632 SAPWLPNRFHAKAVNEGQRKYISTLWNTYAFYVLYANIDNFDATKYTLDASKLGVMDKWL 691

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS  + V+  + +N+ N  I  A   +   V E+ + Y    +     K           
Sbjct: 692 LSRLNTVVGAVDDNLANYRIPEAARALQDFVDEMSNWYVRRSRERFWSKELTQDKINAYM 751

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +A       P + + I+  L
Sbjct: 752 TLYTALVTIAKTSAPMTPFVCDDIYRNL 779



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +           N +PHIGH    +I D++ R+  + G +V    G D HG  +   
Sbjct: 38  KGDKTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYNVPRKAGWDTHGLPVELE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + + +  +      DD   T     
Sbjct: 98  VEKMLGLDGKDQIEKYGLDPFITKCKESVWKYKGMWENFSRTVGFWADMDDPYVTYHNNF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 158 IESEWWALKQIWEKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 201


>gi|254520447|ref|ZP_05132503.1| isoleucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914196|gb|EEH99397.1| isoleucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 1036

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 115/358 (32%), Gaps = 19/358 (5%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + ++ +  G     Y     P+   E        S  + K           +      N 
Sbjct: 437 FLENVIDWGISRDRYWGTPLPIWECECGHRECIGSIAELKEKGINVPDDIELHKPYIDNI 496

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++  K                 K       ++  W D+ +       Y         K 
Sbjct: 497 HLNCPKCN---------------KEMTRTAEVIDCWFDSGSMPFAQLHYPFENKELFEKN 541

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PA       D     F+ +   +  +    P    +     +  KG K+SKS GNV+DP
Sbjct: 542 FPAQFISEAVDQTRGWFYTLLAISTAIFDTNPFENCIVLGHVLDKKGLKMSKSKGNVVDP 601

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            EV++  G DA R+      A      +  D + +     L+          +   L  +
Sbjct: 602 FEVLDAQGADATRWHFYTASAPWLPTRFSIDDVAEAQRKFLSTFWNVYSFYVLYAELDKF 661

Query: 374 DGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ 431
           + +      +    D+ I+S  + +++++  N+ +  I +A   +     E+ + Y    
Sbjct: 662 NPLDYKDFKSENVMDKWIMSKLNTLIKDVDSNLNSYQITQAALIIEEFTDELSNWYVRRN 721

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +     +   +           V+  L  +   FVP +  +I+  L +  +    +S+
Sbjct: 722 RARYWSEDLTEDKIGAYVTLYRVLTTLVKVAAPFVPFITEEIYQNLVIGLDKSAVESV 779



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PH+GH    ++ D++ R+  + G  V+   G D HG  +    +         
Sbjct: 47  PPTANGRPHVGHVLTRVMKDIIPRYKVMKGYKVIRKAGWDTHGLPVELEIEKKLGISGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
                         K  V      +  M D +    D      T    + ++      ++
Sbjct: 107 QIEGYGVEKFVTECKESVFTYVNMWEKMTDQIGYWVDMEKPYVTYHNSYIESVWWALSQM 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y  R     +  EV +G  
Sbjct: 167 WEKGLLYKGHKVMPYCPRCGTGLSSHEVSQGYK 199


>gi|259417508|ref|ZP_05741427.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346414|gb|EEW58228.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 881

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  SKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T +  ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y D+LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVEAG----RGWRSGALVERRELTQWFFKISDYSDELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   +    E       GL+
Sbjct: 206 DGLENWPAKVRLMQENWIGKSRGLQ 230



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 118/351 (33%), Gaps = 47/351 (13%)

Query: 142 YKGADGQYYNAQHNPVQ--------WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
           +             P Q        +++   YF R +A + +  +  E+   ++   +  
Sbjct: 478 HPSWRDCACPNCGKPAQRETDTMDTFVDSSWYFARFTAPRAETPTDLEAASYWMNVDQYI 537

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
             +   +   L     +R     G       +    ++   +  +        N      
Sbjct: 538 GGIEHAILHLLYSRFFARAMHICGHLPESAKEPFDALFTQGMVTHAIYKTNGPNGRP--V 595

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANL--------PLPKKVFSHGFILHKGEKISK 305
             +P D+ V   +  + H +      L             +  ++ ++   +    K+SK
Sbjct: 596 YHYPEDVMVFEHEGNKLHVLKKDVEGLKNGSVEERALTTAMLAELQNNAVEVIPSAKMSK 655

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL  R 
Sbjct: 656 SKNNVVDPLAIISTYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNLCDRI 713

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             M           P A  E DE +L    + ++++   +++   + A+A++    +   
Sbjct: 714 GEM----------DPDAKGEGDEDLLREMHKAIRDVTLGVESFGFNAAIAKLYGFTN--- 760

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                     L K+    A     V  + I+ LA L+    P L+  I+  
Sbjct: 761 ---------TLSKSKASAA-----VQKQAIKTLAQLMSPMTPHLSEDIWAH 797


>gi|195491875|ref|XP_002093751.1| GE21469 [Drosophila yakuba]
 gi|194179852|gb|EDW93463.1| GE21469 [Drosophila yakuba]
          Length = 869

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 5/188 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++K Y+ +   YP+   H+GH     IAD +ARF R+ G +V    G D  G     AA
Sbjct: 60  SQDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCGKNVFQPMGWDSFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  QN    ++    L  S+D    + T   +++   + L+  +   G  Y
Sbjct: 120 NQRGVEPASWTKQNISQMKEQLQRLGCSFDWNHELSTCSPKYYKWTQHLFLMLHRHGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    D++V          A+   V+      +F R SAY  +LL   
Sbjct: 180 QNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLRQWFIRTSAYAKQLLDGL 236

Query: 181 ESHPEFIL 188
           E       
Sbjct: 237 EDPTLRDW 244



 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 57/396 (14%), Positives = 113/396 (28%), Gaps = 93/396 (23%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+      +S         +   +    G K 
Sbjct: 395 KLQDWLISRQRYWGTPIPIVHCQKCGAVPVPEEQLPVSLPPKDSPKEAFLCECPKCGEKD 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      ++          KF P DL++ GK+    H  Y  
Sbjct: 455 ARRESDTMDTFVDSSWYYLRFLDAQNSERIFDPALTKKFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFLLSAN--------LPLPKKVFSHGFI-------------------------------- 296
                 +         P  + +     +                                
Sbjct: 515 FMNHFLHSCGLSPTSEPFSRLLVQGMVMGRSFRVKGSGRYVPESEVEIVNAKKNQAVLKE 574

Query: 297 -----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                +   EK+SKS  N ++P ++  E G D  R  ++ ++A      +          
Sbjct: 575 TKEPVVMTWEKMSKSKLNGVEPGDMFNEYGTDTTRLIILADVAPTSHRNWSSATF----- 629

Query: 352 ADLANGIGNLVSRSVSMILKDYD--------GMIPTPGAFTESDESILSVCSRVLQEIRE 403
                GI N   R    +    +         ++PT   F   D  +    +  ++    
Sbjct: 630 ----PGILNWQKRLWLTLQDFQEAREDQTASEVVPTSEEFLAEDSKLFDARNFYVKGATF 685

Query: 404 NMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA--- 459
           N +  Q +  A++++  L +             L++T       VL    +  R LA   
Sbjct: 686 NYRHAQQLSVAISKMQGLTN------------SLRRTP----KHVLRHGKQFERALAAQI 729

Query: 460 ILLQAFVPKLANKIFD-------ILFVADENRCFQS 488
           I+L    P  A++++         L  A E   +  
Sbjct: 730 IMLAPMAPHFASELWSKFVSIPGRLNPASEELQWSE 765


>gi|83855265|ref|ZP_00948795.1| leucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83843108|gb|EAP82275.1| leucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 848

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N  + RD    L +S D      T +  ++   + L+     +G +Y
Sbjct: 90  MAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLSEGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S + ++LL   
Sbjct: 150 RKNAIVNWDPVDMTVLANEQVEAG----RGWRSGALVERRELTQWFFKISDHSEELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   ++           GL+
Sbjct: 206 DTLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 118/379 (31%), Gaps = 90/379 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G            L Y  S      P++R          
Sbjct: 427 WGLSRQRYWGCPIPVVHCDTCGVVPEKKENLPIELPYDVSFDTPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y             + + A +W   
Sbjct: 480 -----WRDCACPSCGAPAKRETD-TMDTFVD-SSWYFARFTAPRADTPTNMADAGYWMNV 532

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI-------- 296
           D ++ G +    H +Y      A  ++ +LP            + + +H           
Sbjct: 533 DQYIGGIEHAILHLLYSRFFARAMQITGHLPEKAIEPFNALFTQGMVTHEIYQTRDANDR 592

Query: 297 -------------LHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                        L  G         K+SKS  NV+DP+ +I   G D  R+F++ +   
Sbjct: 593 PVYHLPEDVTDGKLADGTEVEIIPSAKMSKSKKNVVDPLGIIANYGADTARWFVLSDSPP 652

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +        N + N+ +R   M                  D+ +L    
Sbjct: 653 ERDVEWTASGAEAAYKH--LNRVWNISTRIAEM----------DDTTAGTGDDDLLRAMH 700

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + + ++   +++   + A+A++ +  +             L+K+   +A+       E I
Sbjct: 701 KTIHDVTMGVESFGFNAAIAKLYAFTA------------TLQKSKAGKAAQ-----REAI 743

Query: 456 RQLAILLQAFVPKLANKIF 474
             LA L+    P LA +I+
Sbjct: 744 MTLAQLMAPMTPHLAEEIW 762


>gi|157828457|ref|YP_001494699.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933175|ref|YP_001649964.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166231640|sp|A8GS16|SYL_RICRS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083140|sp|B0BXI2|SYL_RICRO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157800938|gb|ABV76191.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908262|gb|ABY72558.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 835

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N     K +   N +N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AINNNSHPKKWTYSNIKNMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V     + +F +++ Y ++LL+ 
Sbjct: 144 YQKESFVNWDPVDNTVLANEQVVDG----RGWRSGAIVAKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 126/389 (32%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEICGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFMRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVQEPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N +  +     S+               +E ++ +  +    ++ + E+
Sbjct: 645 GIEG--CSRFINKLEYMFKAIDSL----------KDDVNSEVNKELNRLVHFTIKHVAED 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 693 IKHFALNRAIARMRELSNSISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKERLYNLSFPAFDE 768


>gi|294506347|ref|YP_003570405.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294342675|emb|CBH23453.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 1080

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 21/272 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+         Y    +      +PAD    G D     F++++  A ++   +
Sbjct: 529 LIDVWFDSGAMPYAQWHYPFENEDDFEANFPADFIAEGVDQTRGWFYSLHAIATVVFDEV 588

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                V +   +   G K+SKS+GN ++P EVI++ G D +R+F++      +   + + 
Sbjct: 589 AYENVVVNGLVLDEDGNKMSKSVGNTVEPFEVIDDYGADVVRWFMMSNAPPWESIRFSER 648

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEI 401
           GL+  +       + N+     +    D   Y+          E D+ I+S      Q +
Sbjct: 649 GLRD-LRRTFFGTLENVYRFFATYANIDGFAYERDRMPVEERPELDQWIISRLHTTTQAV 707

Query: 402 RENMQNQLIHRALAQVISLVSEV-DRYFDAQKP--WELKKTNP------------DRAST 446
              +       A   V + V ++ + +    +P  W  KK                +   
Sbjct: 708 EAALDEYDPTTAARAVEAFVEQLSNWHLRRSRPRFWASKKGEQNGPSGQGGTVAAAKKEA 767

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 E +   A L+    P     ++  L 
Sbjct: 768 AYQTIHECLAATAKLMSPIAPFFGEWLYRTLG 799



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 52/163 (31%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +            N  P I H     I D+  R+  + G  V    G D HG  +    
Sbjct: 38  GQPTFTFYEGPPTANGTPGIHHVLARAIKDIFCRYKTMQGYQVDRKAGWDTHGLPVEIEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       +  V +    + ++   +   +  DD   T E  + 
Sbjct: 98  EEELGLETRAEVEEYGIEKYNAACRESVLEYKDLWDNLTQRMGYWVDLDDPYVTFETDYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +T   L K+I ++  +YKG    WYS       +  EV  G +
Sbjct: 158 ETVWWLLKQIEEEDLLYKGHKIQWYSPGSHTVLSSHEVSLGYE 200


>gi|254417260|ref|ZP_05031004.1| leucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196175913|gb|EDX70933.1| leucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 855

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 31  DKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARKSRMQGYRVLHPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  QN    +     L +SYD    + T    ++   + ++ +    G  Y
Sbjct: 91  IQRGVHPAKWTYQNITQMQSELKRLGLSYDWNRELATCAPDYYKWTQWIFLQFLHAGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V   ++G+ + +    V+      +F +++ Y ++LL+  
Sbjct: 151 QKEAAVNWDPIDQTVLANEQV--DSEGRSWRSGAK-VERKLLRQWFLKITDYAEQLLNDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 208 DKLDGWPERVKLMQANWIGKSVG 230



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 96/305 (31%), Gaps = 63/305 (20%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y          D SK   W P D +V G +    H +Y   
Sbjct: 491 KRETDTMDTFIDSSWYFLRYPDANNDQQVFDSSKTNDWMPVDQYVGGIEHAILHLLYSRF 550

Query: 278 FL--------LSANLPL--------------------------------PKKVFSHGFIL 297
           F         L+ + P                                 PK   +   + 
Sbjct: 551 FTKVLRDRGLLNFDEPFQRLLTQGMVQGLTYMNPKTGKWVPSVDVNPSDPKDPETGETLE 610

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              + +SKS  N + P  VI + G D  R F++ +    KD  +D   ++ +      N 
Sbjct: 611 VSYKTMSKSKYNGVAPEAVINKYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLNR 668

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
           +  LV        K  +     P   ++ ++ +       ++E+ +++      + A+++
Sbjct: 669 VWRLVE---EFAAKVTNRSTTIPPELSKPEKDLRRAVHTAIKEVTDDLDGEYQFNTAVSE 725

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L + +                 D       V  E I  L +LL  F P +A +++  
Sbjct: 726 LMKLSNAL----------------GDAKCKDSPVYAEGIETLILLLAPFAPHIAEELWHG 769

Query: 477 LFVAD 481
           +   D
Sbjct: 770 IGHTD 774


>gi|218960887|ref|YP_001740662.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729544|emb|CAO80456.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 1041

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/456 (17%), Positives = 156/456 (34%), Gaps = 26/456 (5%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
            ++ F    D  G+        A    K       R+ ++  ++L        R   K  
Sbjct: 332 YNLPFVQPVDSEGKFTEAVTPWAHQFVKDADKDIIRHLKESGNLLK-------REQIKHS 384

Query: 103 HDTCRILWKKI--SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           +  C      +    +   Y    +    L +             + ++ +   N V W 
Sbjct: 385 YPFCWRCKSPLIYYARESWYIKTTAYKEQLIENNRKIIWYPPFVGEKRFGDWLENNVDWA 444

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-------T 213
                F+             +      +   R+   ++  K   +DL L R        T
Sbjct: 445 LSRDRFWGTPLNIWICEKCGKLRSLGSIEELRKEGKMTSGKDVPEDLDLHRPYIDEVVLT 504

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-KFWPADLHVIGKDIL--RF 270
              G K+   P+ ++  W D+ +       Y      +   + +PAD+   G D     F
Sbjct: 505 CSCGNKMYRTPE-VIDCWFDSGSMPFAQWHYPFENYENFEPELFPADIISEGIDQTRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + LL         + +   +   G K+SKS GN +DPIE+++  G DA+R++L+
Sbjct: 564 YSMLAISTLLKGVSSYKSCLVNELILDKNGRKMSKSHGNAVDPIELMQNYGADAIRWYLL 623

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESD 387
                     +D DG+K+ +       + N+ S   +    D    I  P  +    E D
Sbjct: 624 EVSPPWVPTRFDVDGVKEIL-GKFIGTLKNVYSFFATYANIDGFVAINYPYNWEREVEID 682

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS 445
             I+S    ++  +R   ++    +A+  + S V     + Y    +             
Sbjct: 683 RWIVSRLHSLIIAVRHYFESYDFTKAVRAIQSFVIDELSNWYVRRSRRRFWASGFDQDKI 742

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +V+ + A L+  F P LA ++F  L   +
Sbjct: 743 DAYRTLYQVLVETAKLIAPFAPYLAEELFLNLEAGE 778



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N +P I H     + DV+ R+  ++G  V    G D HG  +   
Sbjct: 36  EGMPRFIFYEGPPTANGKPGIHHIMARTLKDVICRYKTMNGFQVKRKAGWDTHGLPVEIE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V    + +R+M +++   I  D    T    +
Sbjct: 96  VEKMLGLKDKRGIEEYGIEKFCQKCRESVFSYEKLWREMTELMGYWIDLDHPYVTLHNSY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   +      +  IYK      Y        +  EV +G       + +   +  +E
Sbjct: 156 IESVWWILHNFFSRNLIYKAYKIVPYCPSCGTPLSSHEVAQGYKDIEDPSIYVKFKATDE 215

Query: 163 EGYFF 167
           E  ++
Sbjct: 216 ENTYY 220


>gi|260753979|ref|YP_003226872.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553342|gb|ACV76288.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 846

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R   YI     YP+ + H+GH     + DVLAR++R+ G +VL   G D  G     A
Sbjct: 35  SDRPHSYILEMFPYPSGRIHMGHVRNYTMGDVLARYYRMKGHEVLHPMGWDAFGMPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N    R+    +   I +   + T E  ++   + L+  +   G +
Sbjct: 95  AMERKIHPREWTMSNIATMREQLKRIGFAIDWSRELATCEPSYYGQEQALFLDLYKAGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G            V+  +   +F +++ + D LL  
Sbjct: 155 YRKESAVNWDPIDNTVLANEQVIDG----RGWRSGALVERKKLNQWFLKITKFADDLLDG 210

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            +   ++   +    E       G++
Sbjct: 211 LKDLDQWPEKVRSMQENWIGRSQGMQ 236



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 127/381 (33%), Gaps = 62/381 (16%)

Query: 141 VYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           ++  + G     +   PV   ++  +    +  +        + P+   P  R  + +  
Sbjct: 445 IHCDSCGAVPVPKDQLPVTLPDDINFDKPGNPLERHPTWKNVTCPKCGKPARRETDTLDT 504

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                  +  S     +  +  D P                            A+FW   
Sbjct: 505 F------VDSSWYFIRFASQPDDKPFDKATAEKWLPVGQYIGGVEHAILHLLYARFWTRA 558

Query: 260 LHVIGK-DILRFHAIYWPAFLL--------SANLPLPKKVF---SHGFILHKGEK----- 302
           L  IG+ DI       +   ++          +   P+++    +  F+   GEK     
Sbjct: 559 LQSIGRLDIKEPFTGLFTQGMVTHETYKDPEGHWLSPEQIHKDEAGIFLTESGEKVTVGR 618

Query: 303 ---ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
              +SKS  NV++P  ++++ G DA+R+F++ +    +D  + + G++         G  
Sbjct: 619 VEKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPERDLAWTEAGIE---------GCW 669

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +        I +  A    D+ +       ++E+ E ++    ++A+A++  
Sbjct: 670 RFMQRLWRV------AAIASEEASAGIDKDLQHRLHCSIKEVGEAIEGLSFNKAIAKIHD 723

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           LV+ +                  +AS       E    L  L+   VP L+ + + +L  
Sbjct: 724 LVNAI---------------EKAKASATRK---EAALTLFRLVAPMVPHLSEEAWHLL-- 763

Query: 480 ADENRCFQSLDQRLKPGFMLH 500
             E    ++      P   + 
Sbjct: 764 EKEGFVAEASWPEFDPALTVE 784


>gi|218514117|ref|ZP_03510957.1| leucyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 318

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 6/207 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLS 208
           +  ++   +    +       GL    
Sbjct: 209 TLDQWPEKVRLMQKNWIGRSEGLTVRW 235


>gi|262277794|ref|ZP_06055587.1| leucyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224897|gb|EEY75356.1| leucyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 851

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ K Y      YP+ + H+GH     + DV+A + RL G +VL   G D  G     A
Sbjct: 31  KDKPKYYCLEMFPYPSGKIHMGHVRNYTLGDVIANYKRLRGFNVLHPMGWDSFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +   N    +    +L   I +D  I T    ++   +  +  +  KG +
Sbjct: 91  AMQKKLHPKDWTLNNIETMKSQLKLLGFSIDWDREISTCNDDYYKHQQKFFLDLLKKGLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D     +++V  G   +        V   +   +FF+++A+ D L + 
Sbjct: 151 YKKESLVNWDPVDNTVLANEQVIDGKGWRSGAQ----VIQKKLSQWFFKITAFADDLDAS 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
             +  E+   ++   +       G
Sbjct: 207 LNTLNEWPEKVKIMQKNWIGKSVG 230



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 92/223 (41%), Gaps = 25/223 (11%)

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
             +P  ++  N     K       +   E +SKS  NV+DP  VI   G DA+R+F++ +
Sbjct: 586 WVFPEDVIEENGKYFDKNSKETIKVGPSESMSKSKKNVVDPQTVINLYGADAVRWFVLSD 645

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +D  +  +G+               +     MI    +         ++S++    
Sbjct: 646 SPPERDIQWSDEGISGS------YKFIQKIWTISEMIQNIEEKNKLNDEEISQSEK---- 695

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++++EI  N++N   + A+A+    ++ + +     K  ++             +  
Sbjct: 696 LINKLVKEITYNIENFHFNVAVAKFYEFLNFLSKKLHENKSEKI-------------LFK 742

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
           ++ ++  +L+  F P +A++ ++  +   E     + + D++L
Sbjct: 743 KMFKEFLVLIYPFTPHIASECWEKNYGNKEIHISAWPAYDEKL 785


>gi|258512336|ref|YP_003185770.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479062|gb|ACV59381.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 1046

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/453 (14%), Positives = 125/453 (27%), Gaps = 40/453 (8%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           ++D   RF + + L+V         G    K           +       +  +      
Sbjct: 359 VSDYEGRFVKDEDLNVDLVKDLASRGLVYEKHKHEHSY-PHCWRCDTPLIYYAIHSW--- 414

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
               FIRTTE          +K                        + ++ +        
Sbjct: 415 ----FIRTTE----------FKDELIANSQSVNWIPPHIRDGRMGNFLENVIDWNLSRSR 460

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           Y     P+                   +    S  E      R  + +            
Sbjct: 461 YWGTPLPI-----------WRCDACGEIECIGSRAELQAKAGRLPKELHKPYIDELVWPC 509

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G         ++ VW D+ +       Y         + +PAD      D   
Sbjct: 510 R-----CGRGTMARVPEVIDVWFDSGSMPFAQLHYPFENRELFERLYPADFVCEAIDQTR 564

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   +  ++   P    +     +   G+K+SKS GNVIDP E  ++ G DA+R+
Sbjct: 565 GWFYSLLAISTAVTGKAPYKNVLVLGHVLDEHGKKMSKSKGNVIDPFEAFDKHGADAVRF 624

Query: 328 FLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFT 384
           + V          +    +   K    DL   I    +    +   + Y           
Sbjct: 625 YFVSNTQPWNSQLFYHRAVAEAKAKYIDLLQNIHQFYALYAGIDGFNPYQVEQVPVAERP 684

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD-RYFDAQKPWELKKTNPDR 443
             D  +++   + +Q + E        +A   + + V E+   Y    +           
Sbjct: 685 LMDRWLMARLHQTIQGVDEAYHRYDATQAARLLQAFVDELSTWYVRRNRDRFWADGMEKD 744

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                    E ++ +A+L     P LA  I+  
Sbjct: 745 KVAAYLTLFEALKTVALLTAPITPFLAEDIYQN 777



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  PH GH    +  D+  R+  + G  V+   G D HG  +   
Sbjct: 39  EGRPEWVFYEGPPTANGLPHPGHVLTRVFKDLYPRYRTMKGYHVMRKAGWDTHGLPVEIE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +    +R++ + L   I  D    T    +
Sbjct: 99  IEKKFGMNGKKDIQAFGIERFVQACRESVFKYEEVWRELTERLGYWIDLDHPYMTLTDDY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   L K I DKG + +G     Y    E   +  EV +G  
Sbjct: 159 IESVWHLLKTIYDKGWLVEGHRVSPYCPHCETTLSSHEVAQGYK 202


>gi|154149192|ref|YP_001406061.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|189082989|sp|A7I0M0|SYL_CAMHC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|153805201|gb|ABS52208.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 813

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI +   YP+ + H+GH     I D ++R++R+ G +VL   G D  G     AA  
Sbjct: 30  QKKYILSMFPYPSGRIHMGHVRNYTIGDAISRYYRMQGYNVLQPIGFDSFGMPAENAAIK 89

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +   N          L  S+  +  + T++  +    +  + K+ +KG IY+ 
Sbjct: 90  HKIHPKKWTYDNIDYMTKELFRLGFSFSKNRILATSDPIYTKFEQEFFIKMFEKGLIYRK 149

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V  G          N V   E  GY+ ++++Y D+LLS  + 
Sbjct: 150 NAVVNWCEQDQTVLANEQVEDGK----CWRCGNEVVQKEMPGYYLKITSYADELLSCLKD 205

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
               +   +    E       GL
Sbjct: 206 LQNHWPSQVITMQENWIGKSFGL 228



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 91/258 (35%), Gaps = 35/258 (13%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLS 281
           W  A              D   A +W   D ++ G +    H +Y   F         L 
Sbjct: 503 WYFARFTSDENMWQEKGIDEKSANYWMNVDQYIGGIEHAILHLLYARFFQKVLRDLGYLR 562

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    + + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+  +
Sbjct: 563 DSEPFA-NLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPQKELEW 621

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   ++       A    N +      + K  +       +  ++++         LQ+ 
Sbjct: 622 NDSAVEG------AYKFLNRLYERSQNVQKTREIPKIDQSSLNKAEKYARLKVYEALQKS 675

Query: 402 RENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            E  +     +  +A  +  ++ ++                  A     +  E    +  
Sbjct: 676 SEVYEKTFAFNTLIAACMEALNALN------------------AQENRQILTEGYFIILN 717

Query: 461 LLQAFVPKLANKIFDILF 478
           LL   VP +A ++ + LF
Sbjct: 718 LLDPIVPHIACELSENLF 735


>gi|320530710|ref|ZP_08031754.1| isoleucine--tRNA ligase [Selenomonas artemidis F0399]
 gi|320136997|gb|EFW28935.1| isoleucine--tRNA ligase [Selenomonas artemidis F0399]
          Length = 1039

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 111/389 (28%), Gaps = 11/389 (2%)

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T    H   C       +      K        +++    N      G        +H  
Sbjct: 386 THNYPHCWRCNTPLLYYARASWFIKMTAVCDALVKNNNTVNWIPKSIGEGRFGNWIEH-- 443

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKT 213
           VQ        +  +                 +   R+ +        L       ++   
Sbjct: 444 VQDWGISRNRYWGTPLNIWKCDCGCERSVGSIAELRKLQPNCPEDIELHRPYIDEITFPC 503

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G  +   P+ ++  W D+         Y           +PAD      D     F+
Sbjct: 504 EKCGGTMHRVPE-VIDCWFDSGAMPFAQWHYPFENKEIFENHFPADFISEAVDQTRGWFY 562

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++     LL    P    +         G+K+SKS GN ++P++ +   G DA+R++   
Sbjct: 563 SLIAIGTLLFDESPYRNVIVLGHVQDENGQKMSKSKGNAVEPMDALRRHGADAIRWYFYE 622

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDES 389
             A      +  + +++     +           +   + ++D    T         D  
Sbjct: 623 NSAPWLPNRFSHEAVQEGARKFMGTLWNTYAFYVLYANIDEFDPTQHTISYEKLCVMDRW 682

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           +LS  + +++ + E + +  +  A   + S V E+ + Y    +     K          
Sbjct: 683 LLSRLNTMVRAVDEYLGSYRVTEAAKALQSFVEELSNWYVRRSRSRFWAKGMEQDKVDAY 742

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +          +P L   I+  L
Sbjct: 743 MTLYTALVTTVKAAAPMIPFLTESIYRNL 771



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N +PHIGH    +I D+L R+  + G  VL   G D HG  +    + 
Sbjct: 39  ETFTFYDGPPTANGRPHIGHVLTRVIKDMLPRYQSMKGKKVLRKAGWDTHGLPVELEVEK 98

Query: 65  AG-----------------VTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
           A                     +  V      + + +DV+    D      T E  + ++
Sbjct: 99  AIGINGKEQIEEYGIEPFVKKCRESVWTYKAMWEEFSDVVGFWADMEHPYITYENNYIES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 +I  KG +Y+G     Y  R     +  EV +G  
Sbjct: 159 VWWALSEIYKKGLLYQGHKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|260574448|ref|ZP_05842452.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259023344|gb|EEW26636.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 907

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 6/204 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGYSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N  + R     L +S D      T +  ++   + ++  +   G +Y+
Sbjct: 91  ERGGHPKTWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMFIDMMAAGLVYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G         +  V+  E   +FFR+S Y  +LL+  +
Sbjct: 151 KAAVVNWDPVDHTVLANEQVIDG----RGWRSNALVERRELTQWFFRISDYSGELLAALD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLK 205
               +   +            GL+
Sbjct: 207 GLTHWPEKVRLMQANWIGKSRGLQ 230



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 81/206 (39%), Gaps = 33/206 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I+  G D  R+F++ +    +D  +   G +              
Sbjct: 679 KMSKSKKNVVDPMNIIQAFGADTARWFVMSDSPPERDVEWTSSGAEAT---------SKH 729

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   +     D +          D ++    +R + ++ + ++    ++A+A + +  
Sbjct: 730 LARVWRIA----DEISRADAPANAEDAALDRATARTIADVTQGIEGFAFNKAVAALYAFT 785

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + + +                RA+         +  +A L+   VP LA +I+ +L  A 
Sbjct: 786 NTMSK--------STAGAGAKRAA---------MLAMAQLMSPMVPHLAEEIWAMLGGAG 828

Query: 482 ENRCFQSLDQRLKPGFMLHKTFD-PI 506
                Q+   +  P  ++  +   PI
Sbjct: 829 --LVAQAAWPKADPALLVEDSVTLPI 852


>gi|254780933|ref|YP_003065346.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040610|gb|ACT57406.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 947

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/425 (17%), Positives = 147/425 (34%), Gaps = 36/425 (8%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN----AQHNP 156
              D+ R +       G   + C +  + L D     +  +    +G           + 
Sbjct: 373 DKTDSYRHIVPHCERSGVTIEPCITEQWYL-DAKVLAESAIRSAKNGCLSFIPQSWDKSY 431

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE-------RRNEVISFVKSGLKDLSL 209
            +W+E    +                 P+  L +E       R        +     + +
Sbjct: 432 YEWLENIQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDMTVKV 491

Query: 210 SRKTFDWGI-KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            +   D  I  +    + ++  W  +      + G+ +     K  ++P  + V G DIL
Sbjct: 492 RKMIKDGNISDLLKRDEDVLDTWFSSALWPFASLGWPEQTAELKT-YYPTSVLVTGFDIL 550

Query: 269 RFHAIYWPAFLLSANLPLPKK-----------VFSHGFILHK-GEKISKSLGNVIDPIEV 316
            F    W A ++   L   K            V+ H  +  K G+K+SKS GNV+DPI+V
Sbjct: 551 FF----WVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDV 606

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I++ G DALR++       G+D   D + +      +      N + R   M    +   
Sbjct: 607 IDQYGADALRFYFSIMAVQGRDINLDLERIAG--YRNFITKFWNAI-RFSKMKNARHSVS 663

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW 434
                     ++ I+   + V+ ++   M+N   +   A +   V +   D Y +  K  
Sbjct: 664 FVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVEFIKS- 722

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            L + + +  S  L     V+  +  LL   +P +   ++  +   D+      L     
Sbjct: 723 ILNQKDSELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQW 782

Query: 495 PGFML 499
           P  ++
Sbjct: 783 PSLII 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 24/181 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I+          H+GHA+   I D++ RF R+ G +VL+  GTD  G       ++  
Sbjct: 39  FCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRL 98

Query: 67  V---------------------TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                                   K          + +    D S + F  T ++   + 
Sbjct: 99  FAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERF--TMDEGMSNA 156

Query: 106 CRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
            R  +  +   G IY+      W      +  + + + K  DG  +  ++  V+ +    
Sbjct: 157 VRNAFVVLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVDGNLWYVRYPLVEGVTYRH 216

Query: 165 Y 165
            
Sbjct: 217 P 217


>gi|187932165|ref|YP_001892150.1| valyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187713074|gb|ACD31371.1| valyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 919

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 133/395 (33%), Gaps = 84/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +        +   E      +P   +N   ++++  ++D  +SR+   W
Sbjct: 354 LEPYLTKQWFVKADVLAKPAIEAVEKGDVRFVPDNWKNTYFAWMRD-IQDWCVSRQ-LWW 411

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + +   W  +     +T G+ +
Sbjct: 412 GHRIPAWYDEAGNAYVGEDEADVRAKYNLADDIAIKQDEDVFDTWFSSALWPFSTLGWPE 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                 AK++P  + V G DI+ F    +         ++P      +      +G+K+S
Sbjct: 472 QTP-ELAKYYPTSVLVTGFDIIFFWVARMMMFGMYFMNDVPFRDIYITGLIRDSEGQKMS 530

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DP+++I+                                       G DA+R+
Sbjct: 531 KSKGNVLDPVDLIDGISLDELLKKRTTGLMQPQMKAKIEKATKKEFPEGISAYGADAVRF 590

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D   ++     +  N + N  SR V M L DY   +        +D
Sbjct: 591 TYAALASTSRDISFDTARVEG--YRNFCNKLWN-ASRFVMMNLDDY--KVCDNYELGVAD 645

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PD 442
           + I SV +    ++  ++ N         +  LV     D Y +  K     K +     
Sbjct: 646 KWIWSVQNTATADVHRHLANYRFDLVTNTIYDLVWNNYCDWYVEFAK--VALKDDSLSEQ 703

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + + V Y   +V+  +  L    +P +   I+  L
Sbjct: 704 QKNGVKYTLNKVLGNILALAHPLIPFITESIYQQL 738



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH ++M + D+L R++R+ G D L+  GTD  G       
Sbjct: 35  SKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVV 94

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                        + + +          +  S  +D    T +K   D
Sbjct: 95  ERQLNAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDKGLSD 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + K+ + G  Y+G     +  + +   +D EV +      +     PV   +E+
Sbjct: 155 AVKKCFIKLYEDGLAYRGERLVNWDPKLKTAVSDLEVAQVDKQGSFWHFIYPVADSDEK 213


>gi|313680038|ref|YP_004057777.1| isoleucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152753|gb|ADR36604.1| Isoleucyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 1051

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 137/408 (33%), Gaps = 60/408 (14%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +      P+ +   E +F + +AY+D+L+    +     +P   ++         L
Sbjct: 393 HNYPHCWRCKTPLMYYATETWFIKNTAYKDRLIEL--NEQINWVPEHIKHGRYGDWLKNL 450

Query: 205 KDLSLSRKTFD---------------------------WGIKIPDDPQ------------ 225
            D +LSR  +                            WG  +P D              
Sbjct: 451 VDWALSRNRYWGTPLPIWVCDDCGKEELIGSFADLERRWGRPLPADFDPHRPHVDAIELT 510

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                       Y++ VW D+ +       +        A+ +PAD    G D     F+
Sbjct: 511 CEGCGGTMKRVPYVIDVWYDSGSMPFAQHHHPFENREVFARSFPADFISEGIDQTRGWFN 570

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++    +L  ++   K V  HG +L + G K+SKS GNV+DP  +I E G DALR+++ 
Sbjct: 571 SLHQLGTMLFDSVAF-KNVICHGLMLDEAGLKMSKSRGNVVDPWSIISEFGADALRWYVY 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDES 389
                  +  +  + ++  V                   L   D   P P     E D  
Sbjct: 630 VSAPPEANRRFGPNLVRDVVRDYFLTLWNTYKFFVTYANLDRPDLTAPPPVAERPEMDRW 689

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           +++    +++++ E ++      +   +   V E     Y    +    K  +       
Sbjct: 690 LVARLQELVRQVTERLETYDPTGSARALRRFVVEELSQWYVRRNRRRFWKNEDAADREAA 749

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                E +  +  L   F P LA  ++  L  +      +S+     P
Sbjct: 750 YATLWEALVTVTHLTAPFTPYLAEALYQNLVRSVREDAPESVHLARWP 797



 Score = 54.4 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 19/152 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +P + HA      D+  RF  + G  V    G D HG  +    +         
Sbjct: 51  PPTANGRPGVHHAQARSYKDLFPRFKLMQGYHVPRKAGWDTHGLPVELEVEKKLGLKHKR 110

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +    +R   + +      DD  RT +  + ++      ++
Sbjct: 111 EIEAYGIDRFNEACRASVFEYEGEWRKFTERIAFWVDLDDAYRTLDPSYIESVWWSLGEL 170

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
             K  +Y+      Y  R     +  EV +G 
Sbjct: 171 WKKDLLYRDYKVVPYCPRCGTPLSSHEVAQGY 202


>gi|189462468|ref|ZP_03011253.1| hypothetical protein BACCOP_03157 [Bacteroides coprocola DSM 17136]
 gi|189430629|gb|EDU99613.1| hypothetical protein BACCOP_03157 [Bacteroides coprocola DSM 17136]
          Length = 880

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 125/365 (34%), Gaps = 57/365 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F R+  + D  L    +      P + +N         +KD  +SR+   W
Sbjct: 352 IEPKLSMQWFLRMQHFADMALPPVMNDELKFYPAKYKNT-YRNWLENIKDWCISRQ-LWW 409

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                          +  W  +    ++
Sbjct: 410 GHRIPAYYLPEGGFVVAETPEKALELAKEKTGNQNLKVEDLRQDDDCLDTWFSSWLWPIS 469

Query: 241 TTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               ++NP   + K++ P    V G DI+ F    +    +    ++P     F+     
Sbjct: 470 LFDGINNPGNEEIKYYYPTSDLVTGPDIIFFWVARMIMAGYEYMGDMPFKNVYFTGIVRD 529

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SKSLGN  DP+++IE+ G D +R  ++     G D  +D    ++  N      
Sbjct: 530 KIGRKMSKSLGNSPDPLDLIEQYGADGVRMGMMLSAPAGNDILFDDALCEQGRN------ 583

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             N +  +  ++       I  P     + E   ++  +V  E+ +      +  AL  V
Sbjct: 584 FNNKIWNAFRLVKGWQVADIEQPEYAKLATEWFDNLLVKVSAEMDDLFSKYRLSEALMLV 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANKI 473
             L      ++D    W L+   P     +   T E        L   L  F+P +  ++
Sbjct: 644 YKL------FWDEFSSWYLEMVKPAYGQPIDKKTYESTLHFFDVLLRQLHPFMPFITEEL 697

Query: 474 FDILF 478
           +  ++
Sbjct: 698 WQHIY 702



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GRQPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMTGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + +++          L  S  +D    T +++  +
Sbjct: 92  VNKLAQQGIKKTDLTREEFLKHAWAWTEEHGGIILKQLRKLGASCDWDRTAFTMDEKRSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +   ++  + +KG IY+G     +  +     +D+EV    +          V+   E  
Sbjct: 152 SVIKVFADLYNKGLIYRGVRMVNWDPKALTALSDEEVIYKEEHSKLFYLRYKVEGDPEGR 211

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
           Y    +    +  +        I P + +N+ +   K
Sbjct: 212 YAVVAT---TRPETIMGDTAMCINPNDPKNQWLKGKK 245


>gi|328948009|ref|YP_004365346.1| Isoleucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448333|gb|AEB14049.1| Isoleucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 1060

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 110/277 (39%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   A  L    
Sbjct: 534 VFDCWFESGSMPYAQQHYPFENKEYFESHFPADFISEGLDQTRGWFYTLTVLASNLFDKP 593

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDK 343
                + +   +   G K+SKSL N  DP E I ++  DA+R FL+       D   Y  
Sbjct: 594 AFKNCIVNGIVLASDGRKMSKSLRNYTDPNEAINKLSADAIRLFLMHSAVVKADEIRYSD 653

Query: 344 D---GLKKRVNADLANGIGNLVSRS----VSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +    + K +   L N     V  +    V+    ++D  IP        D  ILSV  +
Sbjct: 654 EGVRDVIKSIILPLWNSYSFFVQYANIDGVTCTGHEFDYKIPE----NPLDRWILSVAQK 709

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVD-RYF--DAQKPWELKKTNPDRASTVLYVTVE 453
           +++++   + +  +  A+  ++S + +++  Y   + ++ W+   ++ D+          
Sbjct: 710 MVKDVSSALDDYDLSAAIDPMLSFIDQINNWYIRRNRRRFWK-AGSDADKLEA-YGALYS 767

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
            ++  A++   F+P L+ +++  L  +++      +D
Sbjct: 768 ALKTFALVAAPFIPFLSEELWQNLKTSEDKESVHLMD 804



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFIPSTIKDIIPRYQTMKGKKVERRFGWDCHGLPVENLIEKELGINSKH 106

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +  +    M   +D   D   +T +    ++   + K
Sbjct: 107 EIEAYGVANFNEKCRASVLKYTSEWRKTITRMGRWVDFDNDY--KTMDPDFMESIWWVAK 164

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + DKG +Y+G Y   Y  R     +  E+ +G  
Sbjct: 165 SLWDKGMVYEGKYILPYCPRCATVLSTHELAQGYK 199


>gi|225629915|ref|YP_002726706.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782844|sp|C0R573|SYL_WOLWR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225591896|gb|ACN94915.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 838

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++EK Y+     YP+ + H+GH     I DV+AR+ R  G +VL   G D  G     A
Sbjct: 24  SKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A++  ++ +++  +N  N R     + +SY  +  + T E  ++   +  +      G  
Sbjct: 84  ARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  +   +F +++ + + LL  
Sbjct: 144 YRKESWVNWDPVDQTVLANEQVVDGKG----WRSGAVVEKRKLSQWFLKITDFAEDLLKC 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +S   +   ++   E       G
Sbjct: 200 LQSLKNWPEKVKTMQERWIGKSEG 223



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 67/297 (22%)

Query: 234 ALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP--------AFLLSAN 283
             + Y       D      A  +F P D ++ G +    H +Y                 
Sbjct: 505 ESSWYFAAFCSEDKSIDKDACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFDIK 564

Query: 284 LPL----PKKVFSHGFILHKG------------------------EKISKSLGNVIDPIE 315
            P      + +  H     +                         EK+SKS  N +DP  
Sbjct: 565 EPFSTLITQGMVCHATYKDENGKWLFLAEAKELIARGTKVQVGKVEKMSKSKKNTVDPNF 624

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D  R F++ +    KD  +  DG++    +   N +  +V + +  +   YD 
Sbjct: 625 IIEKYGADTARLFVLSDTPPEKDMEWSDDGVEG--CSRYVNKLWRMVMQ-LKPVNMHYDN 681

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL---AQVISLVSEVDRYFDAQK 432
              T G              ++L  + ++++N  ++  +    ++ +L++E+D       
Sbjct: 682 KSVTGGLL-----EYRKKIHKLLHGLTDDLENCRLNCVVAKFREMTNLIAEID------- 729

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                       +    +  E I  L  +++ F+P LA  ++  +      +  +SL
Sbjct: 730 -----------VAAGKSLIDEGICILIRVIEPFMPHLAESLWQEIGGQPWPKADESL 775


>gi|332187695|ref|ZP_08389430.1| leucyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012261|gb|EGI54331.1| leucyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 833

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 84/222 (37%), Gaps = 6/222 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+ + H+GH     + DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KPRSYVLEMFPYPSGRIHMGHVRNYTMGDVLARYRRMIGHEVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +   N    +     L  + D    I T E  ++   + L+  +   G +Y+
Sbjct: 92  EKGVHPGGWTRDNIATMKAQLKRLGFALDWTREIATCEPDYYGHEQALFLDLYAGGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V  G            V+  +   +F +++ + D+LL    
Sbjct: 152 KESAVNWDPVDMTVLANEQVIDG----RGWRSGALVEKRKLNQWFLKITDFADELLEGLT 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +   +   ++   E       GL+        F   I++   
Sbjct: 208 TLEHWPDKVKLMQENWIGRSKGLQFRFAPVAPFAESIEVYST 249



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 37/195 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  ++++ G DA+R+F++ +    +D  + + G++             
Sbjct: 609 EKMSKSKKNTVDPEPIVDQYGADAVRWFMLSDSPPERDLPWSESGIEGS---------WR 659

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R   +    +DG     G     D+++     + +  +  +++    ++A+A++  L
Sbjct: 660 FVQRLWRL----FDGSEAAEGE----DKALSRKLHQTIAGVAADIEALAFNKAVAKLYEL 711

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+      +  KP   +               E IR   +L+   VP LA + +  +   
Sbjct: 712 VNA----IEKAKPSASRN--------------EAIRTTMLLVAPMVPHLAEEAWAGMGQE 753

Query: 481 D--ENRCFQSLDQRL 493
               +  +  +D+ L
Sbjct: 754 GLIADAAWPEVDESL 768


>gi|258510439|ref|YP_003183873.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477165|gb|ACV57484.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 801

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH     I+DV +R+ +L G ++L   G D  G     
Sbjct: 28  SGKPKYYCLDMFPYPSGSGLHVGHWRGYTISDVWSRYKKLHGYEILHPMGWDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  ++  +QN  NF+   + +     +D  + TT+   +   +  + K+ ++G 
Sbjct: 88  YAIQNGIHPRIATEQNIANFKRQLEEIGAMYDWDREVNTTDPSFYKWTQYFFVKMFERGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    ++EV  G           PV   E E +  +++ Y D+LL+
Sbjct: 148 AYRKKMPINWCPSCKTGLANEEVVDG----CCERCGAPVTRREMEQWMLKITDYADRLLN 203

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++   ++R          G
Sbjct: 204 DL-DKLDWPEHVKRMQRAWIGRSEG 227



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 124/353 (35%), Gaps = 59/353 (16%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGL 204
           Q  P        + F    Y  + +          +P+            E      +G 
Sbjct: 404 QAEPAVSYRLRDWVFARQRYWGEPIPIVYCQVCGTVPVPEDQLPVLLPDVERYEPTGTGE 463

Query: 205 KDLSLSRKTFDWGIKIPDDPQY----IMYVW---IDALTNYLTTTGYLDNPDGSKAKFW- 256
             L+      +        P       M  W         Y       +        +W 
Sbjct: 464 SPLAAIESFVNTTCPKCGGPAKRETDTMPQWAGSCWYFLRYADPHNDKEPFSREAVNYWL 523

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D+++ G +    H +Y   ++        +  + P  +++F+ G I   G K+SKS G
Sbjct: 524 PVDMYIGGVEHAVLHLLYSRFYVKFIYDLGLIDFDEPF-QRLFTQGMITLNGAKMSKSKG 582

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P ++I   GVDALR + +       D  +  +GL+         G+   ++R   +
Sbjct: 583 NVVNPDDIIARYGVDALRMYEMFVGPPEDDAEWSTNGLE---------GVARFLARVYRL 633

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             +  D ++P   + T        +  R +  + E M++  ++ A++  +  V+ + +  
Sbjct: 634 YAQQVDKLVPERPSLT-------KLRHRFVATLTERMESFRLNTAVSAFMEYVNNLQQ-- 684

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                    K   DRA          +  LAI +  F P L  +++++L   D
Sbjct: 685 -------EAKDGLDRA---------TLETLAIAIAPFTPHLGEELWEMLGHTD 721


>gi|145632859|ref|ZP_01788592.1| valyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986515|gb|EDJ93081.1| valyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 954

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 136/417 (32%), Gaps = 90/417 (21%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ M  + ++  +    D  +   E      +P +  N   S+++  ++D  +SR+   
Sbjct: 379 PIEPMLTDQWYVSVKPLADVAIKAVEDGEIQFVPKQYENLYFSWMRD-IQDWCISRQ-LW 436

Query: 216 WG--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYL 245
           WG  I    D                             + ++  W  +     +T G+ 
Sbjct: 437 WGHRIPAWYDAEGNVYVARNEEEVRSKYNLDFAVELKQDEDVLDTWFSSGLWTFSTLGWP 496

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFIL 297
           +     K    P D+ + G DI+ F       F +           +P      +     
Sbjct: 497 EQTKELKMFH-PTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRD 555

Query: 298 HKGEKISKSLGNVIDPIEVIEEV------------------------------------- 320
            +G+K+SKS GNV+DPI++I+ +                                     
Sbjct: 556 EQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIAAH 615

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    + G+D  +D   L+     +  N + N     ++    D        
Sbjct: 616 GTDALRFTLAALASNGRDINWDMKRLEG--YRNFCNKLWNASRFVLTNDKLDLSEG---E 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
             F+ ++  I S  +R ++  R ++           +         D Y +  KP     
Sbjct: 671 IEFSLANRWIQSEFNRTVETFRNSLSQYRFDLCANAIYEFTWNQFCDWYLELTKP-VFAN 729

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADENRCFQSLDQ 491
            N  +        V V+ +L  L    +P +  +I+      + +  ++   Q   Q
Sbjct: 730 GNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKGFVGITADSIMLQPFPQ 786



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      I+          H+GHA++  + D L RF+R++G + L+ TGTD  G      
Sbjct: 36  ENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQTGTDHAGIATQMV 95

Query: 62  AQNAGVTT---------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T + 
Sbjct: 96  VERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDD 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSNAVKEVFVRLHEEGVIYRGKRLVNWDPKLRTAISDLEVENKESKGSLWHFRYPL 210


>gi|256784099|ref|ZP_05522530.1| tRNA synthetase [Streptomyces lividans TK24]
          Length = 506

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 126/387 (32%), Gaps = 40/387 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +  ++      N   H+GH     + ADV +R  R+ G  VL+ +G D+H   +   A+
Sbjct: 6   RRFLVTATPPTTNGDLHVGHLSGPYLGADVFSRAQRMLGHTVLYASGGDDHQTYVVTTAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+       + +R      ++  I  D F    +  +    R  +  +   G +    
Sbjct: 66  RLGLDPVELAARCNREIVGTLELAGIDIDAFTSP-DDAYRAEVREFFTGLHRAGRLKTRT 124

Query: 124 YSGWYSLRDEAYYND-------DEVYKGADGQYYNAQHNP-------------------V 157
           ++  Y  R   Y  +        E   G  G       +P                    
Sbjct: 125 WTFPYCGRTGRYLLEAFATGYCPECLVGTCGAICENCGHPNDVDSLLFPASTGAGPAATT 184

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           Q  E E     L  Y+++   +Y      + P      V   +   L D  +S    DWG
Sbjct: 185 QPRETEILVLPLEEYREQFTEFYRVRRATMRP-HVLRFVDEMLSRPLPDFPVSYPA-DWG 242

Query: 218 IKIPDD--PQYIMYVWIDA--LTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           I +  D     +  VW +      ++           +    W AD     +  +G D  
Sbjct: 243 IPVGIDGFDGQVFNVWAEMLPGLRHMAEAARARRAPATPPGVWAADSGFELVQFLGYDNT 302

Query: 269 RFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            + A  +         L  P  + ++ F    G K S S  +++   +++ + G D +R+
Sbjct: 303 FYFAFAHLGLTFAHGGLTEPAAIVTNEFYHLDGAKFSTSRRHLVWARDLVGKYGADNVRF 362

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADL 354
            L  +    +   + +      V   L
Sbjct: 363 HLALDNPEHQPANFTEADFLDTVRTRL 389


>gi|330444673|ref|YP_004377659.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807783|gb|AEB41956.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 1066

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 75/479 (15%), Positives = 143/479 (29%), Gaps = 24/479 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA--DVLDISYDDF 94
           F       V      D HG    +  +  G   K    +  ++ + +            +
Sbjct: 336 FFICKDHGVPLVCPLDNHGCYTEEIPEYHGQYIKQADKEIIKSLKALRSVFYHGTIKHRY 395

Query: 95  I---RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               RT     + T    +  +    D      S  + + +  Y  +    K  +G    
Sbjct: 396 PFCWRTDTPLIYKTVNSWFVAVEKIKDKMLKANSQIHWMPE--YIKEGRFGKWLEGARDW 453

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           A      W         +  ++              L      +V    +  +  L +  
Sbjct: 454 AISRNRYWGTP------IPIWKSVDGEILVISSIEELEALSGEKVQDIHRHFIDHLEI-- 505

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G      P Y+   W D+         Y           +PAD    G D     
Sbjct: 506 --VKEGKSFFRVP-YVFDCWFDSGAMPYAQNHYPFENKEVFENAFPADFISEGLDQTRGW 562

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   A  L         + +   +   G K+SK L N   P  +++  G DALR +L
Sbjct: 563 FYTLTVIAAALFDRPAFRNVIVNGIILAEDGNKMSKRLNNYPSPKSILDSYGADALRLYL 622

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ES 386
           +  +    +D  +   G++  +   L      L    +   L  +D       + T  E 
Sbjct: 623 LHSVVVKAEDLRFSDKGVEGILKQVLLPLSNVLSFYKIYADLYKFDPKKCPQESLTYTEM 682

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D  ILS    V++++   M    ++ A+   +  + ++ + Y    +    +  +     
Sbjct: 683 DLWILSNLYSVVKKVHSGMDIYNLNAAVEPFVDFIDDLTNWYVRRSRRRFWEAEDSADRR 742

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                  EV+     ++  FVP +A  IF  L   +E       D        + K  +
Sbjct: 743 AAFATLYEVLFVFCRVIAPFVPFIAEDIFQQLTAGNEEESVHLCDFPQVNETKILKDLE 801



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 52/147 (35%), Gaps = 19/147 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I D + R+  + G  V    G D HG  +    +      +  
Sbjct: 51  PPFATGLPHYGHLLASTIKDAVGRYATMRGYYVPRRFGWDCHGVPVEYEVEKTLKLTSPG 110

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFI-------------RTTEKRHHDTCRILWKKI 113
                 +   +   R++       ++ +I             +T ++   ++   ++K +
Sbjct: 111 AVETFGIGAFNEECRNIVFRYVYEWESYIERLGRWVDFSSTWKTMDRSFMESVWWVFKSL 170

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            D+G +Y+G     +S +     ++ E
Sbjct: 171 YDQGLVYEGTKVVPFSTKLGTPLSNFE 197


>gi|295100369|emb|CBK97914.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii L2-6]
          Length = 849

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   +N  +FR+    L  S+  D  I TT+  ++   + ++ ++  KG  
Sbjct: 89  AMKNHIHPAIVTKKNVDHFREQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    ++EV  G          + V    +  +  +++AY DKL+  
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNG----VCERCGSEVVHRVKSQWMLKITAYADKLIDG 204

Query: 180 YESHPEFILPIERRNEVI 197
            +          ++   I
Sbjct: 205 LDGLDYIERVATQQKNWI 222



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 75/183 (40%), Gaps = 37/183 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P EV+++ G D +R + +      +   +    +          G    
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLYEMFMGDFEQAAPWQTSAI---------AGCNRF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  ++  K  +G    P         + ++  + ++++  +++   ++ A+AQ+++LV
Sbjct: 675 LDRVWALSDKLVEGEGYRP--------QLETLLHQTIKKVGADIEGLKMNTAIAQLMTLV 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + +                  RA             +  LL  F P +  ++++ L  + 
Sbjct: 727 NAL-----------YDNGGATRAE---------FETVVQLLNPFAPHMTEELWEKLGHSH 766

Query: 482 ENR 484
           + +
Sbjct: 767 DEQ 769


>gi|261415109|ref|YP_003248792.1| valyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371565|gb|ACX74310.1| valyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302328056|gb|ADL27257.1| valine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 920

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/435 (15%), Positives = 137/435 (31%), Gaps = 46/435 (10%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             + + +   K      +  K   SG   +  E Y N           Y +       W 
Sbjct: 352 EPYLSDQWFVKMDVLADNAMKAVTSGEIKIIPERYANK----------YLDWLKEKRDWC 401

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----W 216
                ++                        R +      ++G+  +    +        
Sbjct: 402 ISRQLWWGHRIPIWHADETTTEEDLNKAFAGRNDIYYYKAQNGIWLICSEEENLKEDAVA 461

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G KI  +   ++  W  +     +T G+ +  D  K K++P  + V  +DI+        
Sbjct: 462 GHKIVQEED-VLDTWFSSGLWPHSTMGWPEQTDTLK-KYYPTSVLVTSRDIITLWVARMV 519

Query: 277 --AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             +      +P    V+ H  IL   G  +SKS GN +DP+++ ++ G DALR+ +    
Sbjct: 520 LFSQENMGTVPF-HTVYIHPKILDGNGMTMSKSKGNGVDPMDIEKKYGTDALRFVMASLC 578

Query: 334 ACGKDGFYDKDGLKKRVNA--------DLANGIGNLVSRSVSMILKDY--------DGMI 377
              +D        K+   +        ++     N +  +   +            D + 
Sbjct: 579 TDNQDVRLPVKKEKQEDGSVINTSEKFEIGRNFSNKLWNACRFLFPHLEQAGALSKDMLP 638

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
                F   D  ILS  +  +Q+  + ++          +   V +     Y + +K   
Sbjct: 639 MDSSIFALEDRWILSRLNSTIQDATKMLEEFHFAELAGFLYRFVWDDVCSSYLEIKKAVI 698

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE---NRCFQSLDQR 492
             +T        + +   V+R +  LL   +P +  ++   LF   E   N  +   D  
Sbjct: 699 NSETLTAEKKNAMAILSHVLRGVIDLLHPVMPFITEELNATLFPGSERVINSAWPKADAS 758

Query: 493 LKPGFMLHKTFDPIF 507
           L     +    +  F
Sbjct: 759 L-----IDAKIEAAF 768



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 54/174 (31%), Gaps = 23/174 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA    + D+L R+ R  G D L+  GTD  G       + 
Sbjct: 33  EPFSVVIPPPNVTGALHLGHALNDTLQDILVRYRRKTGRDTLWIPGTDHAGIATQAVVEK 92

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHH 103
                                   + D+           L +S D     F  T +    
Sbjct: 93  RLFQDEHKTRHDIGRDALVERIWKWKDEYEARITKQLKSLGVSCDWSRQRF--TLDPVCA 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R  +  +  KG IY+G     +  + +    DDE+Y      ++     P+
Sbjct: 151 KAVRHAFFNLFKKGLIYRGKRLVNWDTKLQTAVADDEIYYETVKGHFWTFKYPL 204


>gi|296810440|ref|XP_002845558.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842946|gb|EEQ32608.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 980

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 11/233 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y+     YP+   H+GH     I+DVLAR+ ++ G DVL   G D  G     AA
Sbjct: 74  NKEMAYVLPMFPYPSGTLHMGHVRVYTISDVLARYKQMKGYDVLHPMGWDAFGLPAENAA 133

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +  QN  N +D    L I   +D  + T     +   + L+ K+ +KG  Y
Sbjct: 134 IERGIHPEGWTKQNIANMKDQLKDLGIRFDWDAEVMTCAPEFYKHTQKLFLKLHEKGLAY 193

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+  E + +FFR++A+++ LL   
Sbjct: 194 QAEALVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDL 250

Query: 181 E----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +    S P+ IL ++R    +   +  L    +S       I++       ++
Sbjct: 251 DSLSGSWPDRILTMQRH--WLGKSRGALVPFKISTPEETLDIEVFTTRPDTLH 301



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 85/198 (42%), Gaps = 23/198 (11%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP   IE  G DA R  ++      +   +D+  +   +R  + +
Sbjct: 670 NVSFEKMSKSKYNGVDPNTCIETYGADATRAHVLFSAPVSEVLEWDETKIVGIQRWFSRI 729

Query: 355 ANG------IGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                    +   V+ SV+   +       +P+    +E++ ++L +    +  +   ++
Sbjct: 730 WKIVEDTGDLLKRVNFSVTTERLSSLNGMELPSLDKLSEAESNLLLMGHNTISSVSYCLE 789

Query: 407 N--QLIHRALAQVISLVSEVDRYFDA----QKPWELKKTNPDRASTVLYVTVEV-IRQLA 459
                ++  ++ +I L +       A     +P E+  ++P +++T  + T+ + +  L 
Sbjct: 790 KNQYGLNTVISDLIKLTNA----IAAVPLPAEPSEI--SSPAQSATPSHATIYIALNSLL 843

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL    P  A++ +++L
Sbjct: 844 RLLAPIAPAFASECWEVL 861


>gi|237747004|ref|ZP_04577484.1| valyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378355|gb|EEO28446.1| valyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 933

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 129/384 (33%), Gaps = 77/384 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG FF   +  +  L          +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 369 PEGTFFPGKSLAEVALEKVRDGEIRFMPENWTNT-YNQWLNNIQDWCISRQ-LWWGHQIP 426

Query: 220 IPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPDGSKAK 254
              D +  +YV                         W  +     +T G+ D+       
Sbjct: 427 AWYDEEGNIYVARTEEEARAKAGNKPIRRDPDVLDTWFSSALVPFSTVGWPDDTP-EYRM 485

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F P+ + V G DI+ F    +       +  +P              G+K+SKS GN ++
Sbjct: 486 FLPSTVLVTGFDIIFFWVARMVMMTLHFTGKVPFRTVYVHGLVRDANGQKMSKSKGNTLN 545

Query: 313 PIEVIEE-------------------------------------VGVDALRYFLVREIAC 335
           PI++I+                                       G DALR+ +    + 
Sbjct: 546 PIDLIDGIDVDSLVKQRTFGLMNPKQADSIAKATRKEFGKGIPAFGTDALRFTMASYASL 605

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSV 393
           G++  +D +  +     +  N + N  +R V M  +  D    + G   F+ +D  I S 
Sbjct: 606 GRNINFDLNRCEG--YRNFCNKLWN-ATRFVLMNTEGEDCGFASNGEMEFSLADRWIRSQ 662

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             R   E+ +           + +   + +   D Y +  K  ++++ N  +     +  
Sbjct: 663 FQRAASEVEKGFSEYRFDNIASAIYRFIWDEYCDWYVEMAKV-QIQEGNDAQKRATRHTL 721

Query: 452 VEVIRQLAILLQAFVPKLANKIFD 475
           + V+  +  L    +P +  +++ 
Sbjct: 722 LAVLEAVLRLAHPVIPFITEELWQ 745



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   I D L R+HR+ G +  +  GTD  G      
Sbjct: 32  ENKSSFAIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMRGFNTAWIPGTDHAGIATQIV 91

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++          +  S  +D    T +K   
Sbjct: 92  VERQLDAQNISRHDLGREKFLEKVWEWKEKSGSTITGQMRRMGTSPDWDREYFTMDKTRS 151

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            T   ++ ++ ++G IY+G     +        +D EV    +         P
Sbjct: 152 GTVADVFVRLYEEGLIYRGKRLVNWDPVLGTAVSDLEVVSEEENGSMWHIRYP 204


>gi|50308367|ref|XP_454185.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643320|emb|CAG99272.1| KLLA0E05325p [Kluyveromyces lactis]
          Length = 875

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 80/201 (39%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + +Y+     YP+   HIGH     I+DV+ RF++L G +VL   G D  G     AA  
Sbjct: 48  KNIYVLCMFPYPSGTLHIGHLRVYTISDVVNRFYQLKGYNVLHPMGWDAFGLPAENAAIE 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V   ++  +N    +    ++  + ++D  I T +  ++   + L+ ++   G  Y+ 
Sbjct: 108 RKVNPAIWTKENIGKMKAQMGMMASNFNWDREIATCDPEYYKFTQKLFLELFKNGYAYRK 167

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V          AQ   V+      +F  ++ +  +L    + 
Sbjct: 168 EAEINWDPVDQTVLANEQVDSNGKSWRSGAQ---VEKKLLSQWFLGITRFAHELQHDLDG 224

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   ++R  +       G
Sbjct: 225 LDGWPSHVKRMQKNWIGESKG 245



 Score = 45.1 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 28/197 (14%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+   +   +    EK+SKS  N  DP   I   G+DA R  ++ +        +D+  +
Sbjct: 614 PRNRSTGELLSVSYEKMSKSKYNGADPASCISAHGIDATRAHILFQAPVPDVLNWDESKI 673

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE-----SILSVCSRVLQEI 401
                     GI   + R +   +   D    T  + T +D      ++ +    +L  I
Sbjct: 674 V---------GIERWLERMLKFCISLCDNRSITILSKTPTDMNQHEVALHNGVQTLLSSI 724

Query: 402 RENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +++    ++  ++  + L +             L + +   ++    +++  +++L  
Sbjct: 725 TTSLEKILSLNTVVSDYMKLFN-------------LIEGSIKSSNIREGLSLLYLQKLTT 771

Query: 461 LLQAFVPKLANKIFDIL 477
           +L   VP ++ ++  IL
Sbjct: 772 VLYPVVPCVSEELASIL 788


>gi|288560840|ref|YP_003424326.1| valyl-tRNA synthetase ValS [Methanobrevibacter ruminantium M1]
 gi|288543550|gb|ADC47434.1| valyl-tRNA synthetase ValS [Methanobrevibacter ruminantium M1]
          Length = 939

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 129/425 (30%), Gaps = 40/425 (9%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY---------- 150
              D  +   + +  +G + K         +        E+                   
Sbjct: 357 ELQDAKKQTIEDLKSEGYLTKQEEVDQNVGQCWRCKTPIEILVKKQWFVGVTKLIEESKK 416

Query: 151 -NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            + +   V    E        A +       +      +P+    +    +    + L +
Sbjct: 417 ASNEMRWVPEHMESRLLNWADAMEWDWCISRQRLFATPIPVWYCKDCGKVILPKEEQLPI 476

Query: 210 SRKT------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
                        G       + ++  W+D+  + L+   + +       + +P+ +   
Sbjct: 477 DPTIDKPLEPCQCGCNEFIPEEDVLDTWMDSSISPLSVADWPNPGW---EEIFPSSIRPQ 533

Query: 264 GKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           G DI+R  A Y       L+   P    V +       G K+SKS GNV  P EVI E G
Sbjct: 534 GHDIIRTWAFYTTLRCLALTGQKPFDDIVINGMVFGEDGYKMSKSRGNVTGPEEVIAEYG 593

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR +       G D  +D   +K            N   R +SM + D +      G
Sbjct: 594 ADPLRLW-AANSVPGSDVAFDWKNIK--HGYKFIRKFWN-AFRFISMHIFDEESEKALSG 649

Query: 382 A-------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
                       D  I +  ++V + +     +     A+  +   +     D Y +A K
Sbjct: 650 DIESIKAKLNPMDTWIFAKLNKVNKIVDTAFYDYNYATAINTIEQFIWHDFCDEYIEAVK 709

Query: 433 PWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
            + L   +   +      Y    VI     LL    P  A +++   +  ++     +L 
Sbjct: 710 -YRLYNDDISEESRIAAKYTLRTVIEDSLKLLAPIAPFFAEEVYQ--YFDEDKSIHSTLW 766

Query: 491 QRLKP 495
             + P
Sbjct: 767 PEIDP 771



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 53/159 (33%), Gaps = 15/159 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  I T   YP    H+GH       D  AR+ R  G+DVLF  G D HG       
Sbjct: 54  TRPRYIIDTPPPYPTGLLHMGHILNWAYMDFNARYRREKGMDVLFPQGWDCHGLPTEVKV 113

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +      K                  N    R     +  S D      T    +    +
Sbjct: 114 EETHNIKKNDVTRAEFRDMCTELTSHNIELMRGQMRSVGFSQDWSREYITMTPEYRKRTQ 173

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + + K+ D+G IY+G +   +  R E      EV    +
Sbjct: 174 LSFLKMYDQGLIYQGIHPVNWCPRCETAIAFAEVEYSEN 212


>gi|150024327|ref|YP_001295153.1| isoleucyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149770868|emb|CAL42333.1| Isoleucine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 1133

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 99/280 (35%), Gaps = 10/280 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         + K +PAD    G D     F+ ++
Sbjct: 595 KPMKRESDLIDVWFDSGSMPYAQWHYPFENKDKIDENKDFPADFIAEGVDQTRGWFYTLH 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L+   +     V +   +   G+K+SK LGN  DP E + E G DA R++++    
Sbjct: 655 AIGTLVFDKVAYKNVVSNGLVLDKNGQKMSKRLGNAADPFETLTEYGPDATRWYMISNAN 714

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D +G+ + V       + N  S        D   Y           E D  IL
Sbjct: 715 PWDNLKFDLEGIAE-VRRKFFGTLYNTYSFFALYANIDGFKYAEAEIPLNERPEIDRWIL 773

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + +++ + +   +    +A   +   V E   + Y    +    K            
Sbjct: 774 SELNTLIKVVDDAYADYEPTKAARAISDFVQENLSNWYVRLCRRRFWKGDYAQDKIAAYQ 833

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                +  ++ L     P   +K++  L +  ++  + S+
Sbjct: 834 TLYTCLITVSKLGAPIAPFFMDKLYRDLTLTTQSEKYDSV 873



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  L G  V    G D HG  +   
Sbjct: 38  EGNTPFVFFEGPPSANGLPGIHHVMARAIKDIFCRYKTLKGFQVKRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKV-----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK                   V + +  + D+ + +   +   D   T + ++
Sbjct: 98  TEKELGITKEDIGKTISIEEYNEACKKTVMRYTDVWNDLTEKMGYWVDMQDPYVTYKPKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++   + K+I +K  +YKG     YS +     +  EV +
Sbjct: 158 MESVWWILKQIYNKDLMYKGYTVQPYSPKAGTGLSSHEVNQ 198


>gi|57157209|dbj|BAD83634.1| valyl tRNA synthetase [Entamoeba histolytica]
          Length = 527

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 120/332 (36%), Gaps = 58/332 (17%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I++  DP  ++  W  +     +  G+ +       K++P +L   G DI+ F    +  
Sbjct: 46  IELKQDPD-VLDTWFSSGLFPFSVMGWPEQTK-DLEKYFPGELLETGNDIIFFWVARMVM 103

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE----------------- 318
            +  L   LP  + +F       +G K+SKSLGN+IDPI+VIE                 
Sbjct: 104 MSLELMDCLPFKEVLFHSIVRDAQGRKMSKSLGNIIDPIDVIEGISLKGLNDKLYTYNLP 163

Query: 319 --------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DA+R+ L+  +  G D   D + +      +  N +
Sbjct: 164 EKECVIAAEGQKKDFPNGIEECGTDAMRFALLAYMTQGHDINLDINRVVG--YRNFCNKL 221

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            N    S     KD+          T S  D+ IL   + ++  +++  ++     A   
Sbjct: 222 WNAFKFSTMNFRKDFKAQETFEIKKTNSRLDQWILHRLNVMITSVQQWFKSYEFGNATQA 281

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + S       D Y +A K    +  + +R      V   VI     +L  F+P +  +++
Sbjct: 282 IYSFWLYDFCDVYLEASK-GIFRGPDNERRRAAEEVLYNVIEIGLRVLHPFMPFITEELW 340

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
             L   ++               M+    +PI
Sbjct: 341 QRLPRRNDKEI----------SIMVTSYPEPI 362


>gi|294010028|ref|YP_003543488.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292673358|dbj|BAI94876.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 838

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ + Y+     YP+ + HIGH     + DVLARF R+ G +VL   G D  G     A
Sbjct: 30  SEKPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLARFRRMTGHEVLHPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +  +N  N +     L  + D    + T    ++   + L+  + + G +
Sbjct: 90  AMEKNVHPGKWTYENIANMKAQLKKLGFALDWSRELATCHPDYYGHEQALFLDMLEAGLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G           PV+  +   +F +++ + D LL+ 
Sbjct: 150 YRKESAVNWDPVDMTVLANEQVIDGKG----WRSGAPVEKRKLSQWFLKITQFADDLLAG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ++  ++   ++   E       GL+
Sbjct: 206 LKTLDQWPDKVKLMQENWIGKSVGLQ 231



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 125/390 (32%), Gaps = 68/390 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR--NEVISFV 200
            G   Q Y     PV   E+ G           +L    S      P++R    + +   
Sbjct: 423 WGVSRQRYWGTPIPVIHCEDCGPVGVPKDQLPVVLPEDVSFDIPGNPLDRHPTWKHVDCP 482

Query: 201 KSGLKDLSL----------SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
             G                S     +  +  D P     V                    
Sbjct: 483 TCGKPARRETDTLDTFADSSWYFIRFASQPKDRPFDRETVEKWLPVGQYIGGVEHAILHL 542

Query: 251 SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGF------------- 295
             A+FW   L  +G+      F  ++    +       P   +                 
Sbjct: 543 LYARFWTRALQHMGQIGFAEPFTGLFTQGMVTHETYKSPDGAWLAPQEVERQGDRIVMVG 602

Query: 296 -----ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                 L + EK+SKS  NV+DP ++I + G DA+R+F++ +    +D  + + G++   
Sbjct: 603 TGAPVTLGRVEKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPERDLPWTEAGIEGSW 662

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                    N + R      K  +G           D+++     + +  + ++++    
Sbjct: 663 R------FINRLWRLFGEADKGAEGQ----------DKTLDRKLHQTIDGVAKDIEALSF 706

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           ++A+A++  L + V            +K  P  + +        IR LA+L+    P LA
Sbjct: 707 NKAVAKIYELTNAV------------EKARPSASRSA------AIRALALLVAPMTPHLA 748

Query: 471 NKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            + +  +   ++    ++    + P  ++ 
Sbjct: 749 EEAWADMG--EQGLIAEAAWPAVDPALLVE 776


>gi|209965829|ref|YP_002298744.1| leucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|238064871|sp|B6IU54|SYL_RHOCS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209959295|gb|ACI99931.1| leucyl-tRNA synthetase LeuS [Rhodospirillum centenum SW]
          Length = 865

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 73/202 (36%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA 
Sbjct: 31  KPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARFKRAKGFNVLHPMGWDAFGLPAENAAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    R     +   I +   + T    ++   + ++      G  Y+
Sbjct: 91  EKGVHPGKWTYENIATMRGQLQTMGLAIDWSREVATCRPEYYRHEQKIFLDFLKAGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  +   +F +++ + D LL   +
Sbjct: 151 KESWVNWDPVDNTVLANEQVVDG----RGWRTGALVEKRKLSQWFLKITHFADDLLEALK 206

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   +    E      +G
Sbjct: 207 GLERWPDKVRTMQENWIGRSTG 228



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 124/402 (30%), Gaps = 74/402 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV    + G      A     L    +      P+ R          
Sbjct: 422 WGVSRQRYWGCPIPVIHCPKCGAVPVPEAQLPVTLPDDVTFDAPGNPLARHPTWK----- 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                 ++        +   D              +          D    K+W P D +
Sbjct: 477 -----HVACPCCGGAAERETDTFDTFIESSWYFLRFADPRNGTLAFDPELVKYWLPVDQY 531

Query: 262 VIGKDILRFHAIYWPAFL-------------------------------LSANLPLPKKV 290
           + G +    H +Y   +                                       P +V
Sbjct: 532 IGGVEHAVLHLLYARFWTRALAHCGYLDLAEPFAGLFTQGMVTHATYQGTDGKWLFPAEV 591

Query: 291 FSHGFILHKG-----------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                 + K             K+SKS  NV+DP ++IE  G DA R F++ +    +D 
Sbjct: 592 EFREGAMVKSDDGTAVTVGPIIKMSKSKKNVVDPQQIIESYGADAARLFMMSDSPPDRDL 651

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYD---GMIPTPGAFTESDESILSVCS 395
            +   G+         +G    ++R   ++ +  +D      P P +F E   +I  +  
Sbjct: 652 EWTTAGI---------DGAWRYINRLWRLVTEPGFDLPAPGTPAPASFGEEATAIRRLAH 702

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV--E 453
           +  Q+I E+++    + ++A++ S  +               K     A          E
Sbjct: 703 KAAQQIGEDIEGFRFNSSVARLRSFSNG----VQDAFAKLAAKAAAGTAPAADEAWAARE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
            +  LA +++  +P LA++++  L  A    +R + ++D  L
Sbjct: 759 ALEMLARMVEPMMPHLAHEMWVELGHAGLLLDRPWPAVDAAL 800


>gi|195428976|ref|XP_002062540.1| GK16600 [Drosophila willistoni]
 gi|194158625|gb|EDW73526.1| GK16600 [Drosophila willistoni]
          Length = 877

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 5/189 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++K Y+ +   YP+   H+GH     I+D +ARFHR+ G +V    G D  G     A
Sbjct: 59  QSQDKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFHRMCGKNVFQPIGWDSFGLPAENA 118

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    + DQN    +   + L  S+D    + T   +++   + L+  +  +G  
Sbjct: 119 ANQRGVEPSQWTDQNISQMKQQLERLGCSFDWSHELSTCSPKYYKWTQKLFLMLHQQGLA 178

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    D++V           +   V+    + +F R S++  +LL  
Sbjct: 179 YQNEALVNWDPVDQTVLADEQVDANGCSWRSGVK---VEKKLLKQWFIRTSSFAKQLLDG 235

Query: 180 YESHPEFIL 188
            E       
Sbjct: 236 LEDPTLRDW 244



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/374 (12%), Positives = 98/374 (26%), Gaps = 80/374 (21%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+      +          S   +    G   
Sbjct: 396 KLQDWLISRQRYWGTPIPIIHCAKCGSVPVPEDQLPVILPPKQSGIDSPVCQCPKCGDPN 455

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      ++ +        +F P DL++ GK+    H  Y  
Sbjct: 456 ARRETDTMDTFVDSSWYYLRFLDSHNDKNMFDPALVKQFMPVDLYIGGKEHAVLHLYYAR 515

Query: 277 AFLLS---ANLPLPKKVFSH---------------------------------------- 293
                     L    + FS                                         
Sbjct: 516 FMNHFLHSCGLTPTSEPFSRLLVQGMVMGRSFRIKGSGRYVPESQVEIINAKKNQALLKE 575

Query: 294 --GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
               ++   EK+SKS  N ++P E+  E G D  R  ++ ++A      +        +N
Sbjct: 576 TKEPVVMSWEKMSKSKLNGVEPSEMFNEYGTDTTRLIILADVAPTSHRNWSSATFPGILN 635

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQ 406
                     +  ++       D   P         F   D  +    +  ++    N +
Sbjct: 636 ------WQKRLWITLKAFQSARDDPSPPEVDTQSDVFLAEDAKLFDARNFYIKGATFNYR 689

Query: 407 -NQLIHRALAQVISL---VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
               +  A++++  L   +     Y              +RA               I+L
Sbjct: 690 HAHQLSVAISKMQGLTNSLRRAPNYIQR------YGKQFERALAAQ----------IIML 733

Query: 463 QAFVPKLANKIFDI 476
               P  A++++  
Sbjct: 734 APMAPHFASELWSN 747


>gi|119944173|ref|YP_941853.1| valyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119862777|gb|ABM02254.1| valyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 952

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 137/397 (34%), Gaps = 86/397 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R++   +       +     +P + +N + +   + ++D  +SR+   W
Sbjct: 374 IEPMLTDQWYVRVAPLAEVANEAVNNGDIEFVPKQYKN-MYNSWMNDVQDWCVSRQ-LWW 431

Query: 217 G--IKIPDD----------------------------PQYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDQAGKIYVGRDEAEVRAKHDLSDDFILTQDEDVLDTWFSSGLWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                K      D+ V G DI+ F         +           +P  K  F+      
Sbjct: 492 KTSDLKTFH-STDVLVTGFDIIFFWVARMIMMTMHFMKDENNKPQVPFKKVYFTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 HGDKMSKSKGNVLDPLDIIDGIDLESLVAKRCGNMMQPQLAAKIEKDTRKTFANGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--T 379
            DALR+ L    + G+D  +D + L+     +  N + N  SR V M  +++D      T
Sbjct: 611 TDALRFTLAAMASTGRDINWDMNRLEG--YRNFCNKLWN-ASRYVLMSTEEHDCGFSGNT 667

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
              F+ +D  I       +++ R+ +       A   +     +     Y +  KP  L 
Sbjct: 668 EMEFSLADRWIQGQLQTTIKDFRQALDTFRFDIAANILYEFTWDQFCGWYLELTKP-ILF 726

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           K +  +     +  + V+  L  +    +P +  +I+
Sbjct: 727 KGSEAQQRGTRHTLITVLETLLRVAHPMLPFMTEEIW 763



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  TSKESYCIMIPPPNVTGSLHMGHAFQDTIMDTLVRYQRMQGKNTLWQMGTDHAGIATQMV 89

Query: 62  AQNAGVT---------------TKVFVD------QNSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++        + S+  R +   +D   + F  T + 
Sbjct: 90  VERKIFAETGQTRKELGRETFIEKIWDWKAESGSKISQQMRRLGTSVDWDRERF--TMDD 147

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++  + +   IY+G     +  +     +D EV       +      P+
Sbjct: 148 GLSEAVKKVFVDLYNDNLIYRGKRLVNWDPKLHTAISDLEVENKDVKGFMWHFRYPL 204


>gi|325193359|emb|CCA27697.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 1019

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 129/427 (30%), Gaps = 57/427 (13%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM----EEEGYFFR 168
            S  GD+ +      + +       D              + +   W         +   
Sbjct: 420 CSRSGDVIEPMIKPQWFINCNEMAQDAMKAVRDKQLKIVPEMHEKTWFRWLENIRDWCIS 479

Query: 169 LSAYQDKLLSYYESHPEFILP--IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD---- 222
              +    +  Y +H +   P  +      + +V    ++ +  R     GI I      
Sbjct: 480 RQLWWGHRIPAYFAHIKGEKPLNMNSDENGVRWVAGLSEEDAKKRAAEKLGISIDQIELT 539

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
             + ++  W+ A        G+ +        F+P DL   G DIL F    + +    L
Sbjct: 540 QDEDVLDTWVSAGLFPFAVFGWPNESL-DMESFYPTDLMETGYDILFFWVARMVFMGQKL 598

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI----------------------- 317
           +  LP              G K+SKSLGNV+DP+E+I                       
Sbjct: 599 TGKLPFKTVYLHSMVRDKYGRKMSKSLGNVVDPLEIISGCTLSALFKKLESGNLPIKEIE 658

Query: 318 --------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                          E G DALR+ L+     G+D   D + L      +  N + N V 
Sbjct: 659 KAKKGQKLDFPNGIPECGADALRFGLLSYTQQGRDINLDINRLVG--YRNFCNKLWNAVR 716

Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            ++S   K +D    T    A    D  ILS  +  +    +             + S  
Sbjct: 717 FALSNFPKGFDASTTTLISNALAPRDRFILSRLNHTIVACNDAFVAFEFGDIANTLYSFW 776

Query: 422 --SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D Y +  KP         +   +       +     LL   +P +  +++  L  
Sbjct: 777 LYDLCDVYLELSKPIMNADDTKAKLRALE-TLYVCLDYGLRLLHPIMPFVTEELWQRLPG 835

Query: 480 ADENRCF 486
             +++  
Sbjct: 836 KRQSKSI 842



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E+  +           H+GHA  + I D L R+HR+ G   L+  GTD  G      
Sbjct: 88  KADERFVMVIPPPNVTGSLHLGHALTVAIQDALTRWHRMKGHATLWVPGTDHAGIATQSV 147

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                         + +Q           +  S D      + ++  
Sbjct: 148 VERRLLKETNQSRHDLGREAFLEKVWEWKNQYESQIHHQFKSVGCSVDWSRKYFSMDENC 207

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R  +  + ++  IY+      +S + +   ++ EV  
Sbjct: 208 SRAVRHAFCILWEEKLIYRATKMINWSCKLKTALSEIEVDY 248


>gi|325267139|ref|ZP_08133807.1| valine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981377|gb|EGC17021.1| valine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 960

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 72/418 (17%), Positives = 134/418 (32%), Gaps = 78/418 (18%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +   K     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 402 EPESEFKGMSLAQKAKHAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 459

Query: 220 IPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPDGSKAK 254
              D    +YV                         W  +     +T G+ D    ++A 
Sbjct: 460 AWYDENGKIYVARSEAEAQKLAGSLHLTRDEDVLDTWFSSALVPFSTLGWKDGEPDTEAM 519

Query: 255 --FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
             F P+ + V G +I+ F    +      +   +P            + G+K++KS GNV
Sbjct: 520 KAFIPSSVLVTGYEIIFFWVARMIMMTTHIVGKVPFRDVYIHGIVRDYDGKKMAKSEGNV 579

Query: 311 IDPIEVIEEV-------------------------------------GVDALRYFLVREI 333
           IDP+++I+ +                                     G DALR+ +    
Sbjct: 580 IDPVDLIDGIDLDKLLVKRTTGLRKPETAPAVKKTTEKLFPEGIPAMGADALRFTMASYA 639

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESIL 391
           + G+   +D          +  N + N  +  V M  ++ D       P A+T +D+ I+
Sbjct: 640 SLGRSVNFDFKR--AEGYRNFCNKLWN-ATNFVLMNTENQDCGQDETQPLAYTFADQWII 696

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
               +      E  +      A   +   V     D Y +  K  +++   P    T   
Sbjct: 697 GRLQQTEAAAAEAFETYRFDLAAQTLYEFVWNDYCDWYIELAKV-QIQTGCPATQRTTRR 755

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             V V+     LL   +P +  +++  +      +   S+     P     K     F
Sbjct: 756 TLVRVLEAALRLLHPIIPFITEELWQAVAPLANAKTADSIMLAAYPEADPEKIVQAAF 813



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E   I           H+GHA+   I D LAR++R+ G +  +  GTD  G      
Sbjct: 46  SKPESFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYYRMKGRNTCWIPGTDHAGIATQIV 105

Query: 62  AQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +       ++  R +    D S + F  T +  
Sbjct: 106 VERQLAAQGLSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWSREYF--TMDDT 163

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +    ++ K+ ++G IY+G     +        +D EV              P+
Sbjct: 164 RAEAVTAVFVKLYNQGLIYRGKRLVNWDPVLGTAVSDLEVENVETEGSMWHIRYPL 219


>gi|294654480|ref|XP_456540.2| DEHA2A05038p [Debaryomyces hansenii CBS767]
 gi|199428917|emb|CAG84495.2| DEHA2A05038p [Debaryomyces hansenii]
          Length = 944

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  E  Y  +   YP+   H+GH     I+DV+ARF RL G +V+   G D  G     A
Sbjct: 72  ESAEPFYCLSMFPYPSGMLHMGHLRVYTISDVIARFKRLKGYNVIHPMGWDAFGLPAENA 131

Query: 62  AQNAGVTTKVFVDQNSRNFRDM--ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   ++ D N +  ++     + D  +D  I T    ++   + ++  + + G  
Sbjct: 132 AVERGINPAIWTDSNIQKMKEQMSLMLADFDWDREISTCSPDYYKWTQKIFLLLFEHGLA 191

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V          A    V+    E +F  ++ Y   L   
Sbjct: 192 YRNEAEINWDPVDQTVLANEQVDSEGKSWRSGA---LVEKRNLEQWFIGITKYAKDLNED 248

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +   ++   ++           G
Sbjct: 249 LKVLDKWPDKVKSMQSHWIGESQG 272



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 127/360 (35%), Gaps = 54/360 (15%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           + N      G + +      +   +M+   YFFR +   +  L +  +     +PI+   
Sbjct: 531 FVNTKCPSCGGNAKRDTDTMD--TFMDSSWYFFRYTDPTNTQLPFDHAIASKHMPID--- 585

Query: 195 EVISFVKSGLKDLSLSRK--TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
             I  V+  +  L  SR    F   I + D   +  +  I  L       G       S+
Sbjct: 586 MYIGGVEHAILHLLYSRFISKFLGDIGLWDGKDHR-HEPIKQLVTQGMVHGKTYTDPESE 644

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
               P +L +                   +N+  PK + S        EK+SKS  N  D
Sbjct: 645 RFLKPEELDL-------------------SNVNEPKIIKSGLLPKISFEKMSKSKYNGAD 685

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLAN----GIGNLVSRSV 366
           P E I++ G DA R  ++ +        ++++ +    R    + N       ++++ + 
Sbjct: 686 PSECIKKYGADATRAHMLFQAPISDILNWNEEQIHGIDRWLRKVVNLNDVIAESMLNDNG 745

Query: 367 SMILKDY--------DGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
                +         + +      F E++  + +     ++ + + ++ +   +  ++  
Sbjct: 746 RTNNDNCTEYQNIQLNDITYETIKFNETEFELYNDAQNYVESVSKAIEIDFSFNTIISDF 805

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +      +  + A K  +   +N         + ++  ++L I++    P +A + ++ +
Sbjct: 806 MKF---TNSIYAAIKSKDYVNSN---------LLLDSYKRLLIIMAPVTPCVAEECWEQI 853


>gi|147668810|ref|YP_001213628.1| leucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|254782493|sp|A5FP73|SYL_DEHSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146269758|gb|ABQ16750.1| leucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 813

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 6/252 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLRGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHNIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V  G           P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQVVDGT----CWRCETPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                 +   +RN V     + +         F+  IK+       +Y     +      
Sbjct: 208 LDWPEKITAMQRNWVGKSYGAEVSFALDCPTAFEKEIKVFTTRPDTIYGVTFMVLAPEHP 267

Query: 242 TGYLDNPDGSKA 253
                    +KA
Sbjct: 268 LVEKITTPENKA 279



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 38/286 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D  K K+W P DL+  G +    H  Y   
Sbjct: 489 KRETDTMDTFMCSSWYFLRYTSPGYDKGPFDPVKLKYWMPVDLYTGGAEHAVMHLFYSRF 548

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F        ++    P  KK+F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L
Sbjct: 549 FTKALRDMGIIDFGEPF-KKLFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYL 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      + G ++  GL          G+   ++R  ++  ++Y        A  E++  
Sbjct: 608 MFVGPWDQGGEWNDSGLS---------GMSRWLNRVWNLFTEEYTPQ----TASAEAERE 654

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + +++I  +++    +  +A ++ L +             L K     A +   
Sbjct: 655 LKRTLHQTIKKITMDIERLRFNTVVAALMELSN------------SLAKLKETAAISAEN 702

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRL 493
                ++  A++L    P +A +++  L +  +  N+ + + D+ L
Sbjct: 703 W-QNTLQTFALMLAPVAPHIAEELWANLGMKYSIHNQNWPTWDEEL 747


>gi|328353003|emb|CCA39401.1| valyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 1047

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 128/373 (34%), Gaps = 45/373 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y  + E  +  E   +     +S  +    +   F   I   +  
Sbjct: 506 WCISRQLWWGHRCPVYFVNIEGEVNDENDGQYWVSGRSLEEAQEKASAKFAGKIFTLEQD 565

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ DN    K +F+P  +   G DIL F    +      L+ 
Sbjct: 566 EDVLDTWFSSGLWPFSTLGWPDNTPDMK-QFYPFSMLETGWDILFFWVTRMILLGLKLTG 624

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
           ++P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      ++   
Sbjct: 625 DVPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVINGISLEDLHAKLLGGNLDPREVEK 683

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I       +
Sbjct: 684 AKKGQKESYPSGIPECGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFVL 743

Query: 367 SMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--S 422
             +  DY         G  +  +  IL   S+  + + E+++ +    A   +       
Sbjct: 744 MRLGDDYKPPATGDLTGKESLVERWILHKLSKASKVVNESIEKRDFFEATNAIYQFWLYE 803

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D Y +  K + + +   D+  +        I     L+  F+P L  +++  L   + 
Sbjct: 804 LCDVYIENSK-YLITEGTADQKKSAQDTLFTCIDAALKLIHPFMPFLTEEMWQRLPRREA 862

Query: 483 NRCFQSLDQRLKP 495
            +   S+ +   P
Sbjct: 863 EKSIISISKAPYP 875



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + + D L RF+R+ G   L+  G D  G       + + 
Sbjct: 125 FSIPAPPPNITGALHIGHALTIALQDTLIRFYRMKGKTTLYLPGFDHAGIATQSVVEKSL 184

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + D      R   + L  SYD      T          
Sbjct: 185 WAQEGKTRHDLGREKFIEKVWDWKDVYQNRIRSQFEKLGASYDFSREAFTLNPMLSKAVT 244

Query: 108 ILWKKISDKGDIYK 121
             + ++ + G IY+
Sbjct: 245 EAFVRLHEDGTIYR 258


>gi|83644751|ref|YP_433186.1| valyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83632794|gb|ABC28761.1| valyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 952

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 129/399 (32%), Gaps = 87/399 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  + A  +  +   E      +P +  N   ++++  L+D  +SR+   W
Sbjct: 373 IEPYLTDQWFVAVKALAEPAIKAVEDGNIQFVPKQYENMYFAWMRD-LQDWCISRQ-LWW 430

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D Q  +YV                            W  +      T G+ +
Sbjct: 431 GHRIPAWYDDQGNVYVARNEEEVRSKYSIDASVALRQDEDVLDTWFSSALWTFGTLGWPE 490

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N    +    P  + V G DI+ F         +           +P             
Sbjct: 491 NTRELQTYH-PTSVLVTGFDIIFFWVARMIMMTMHFIKDEDGKSQVPFKTVYVHGLVRDS 549

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G K+SKS GNV+DPI++I+                                       G
Sbjct: 550 QGAKMSKSKGNVLDPIDLIDGIELESLVTKRTTGLMRPQDAPKIEKATRSEFGEGIASYG 609

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+      + G+D  +D   ++     +  N I N  +R V M  +  D       
Sbjct: 610 TDALRFTFCSLASTGRDIKFDVGRIEG--YRNFCNKIWN-AARYVLMNTEGQDCGQNNES 666

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP--WEL 436
                ++  I+S      Q++ + +      +A   +   +     D Y +  KP  W+ 
Sbjct: 667 YELGLAERWIISRLQETEQQVEKAVAAFRFDQASQAIYEFIWNEYCDWYLELSKPVLWDD 726

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +   +  T     V V+     +   F+P +  +I+ 
Sbjct: 727 AASAELKRGT-RRTLVRVLETALRMAHPFMPYITEEIWQ 764



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           H+GHA++  I D L R++R+ G D L+  GTD  G      
Sbjct: 29  QQGEPFSIMIPPPNVTGSLHMGHAFQDTIMDALTRYYRMQGRDTLWQVGTDHAGIATQMV 88

Query: 62  AQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEK 100
            +      +                           +R  R M   +D S + F  T ++
Sbjct: 89  VERKLAAEEDKTRHDLGREAFLKKVWEWKAESGGTITRQLRRMGASVDWSRERF--TMDE 146

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +   + ++ ++ D   IY+G     +  +     +D EV    +         P+
Sbjct: 147 GFYKAVQEVFVRLHDDKLIYRGKRLVNWDPKLHTAISDLEVISEDEKGKLWHFRYPL 203


>gi|82617184|emb|CAI64091.1| probable isoleucyl-tRNA synthetase [uncultured archaeon]
 gi|268323026|emb|CBH36614.1| probable isoleucyl-tRNA synthetase [uncultured archaeon]
          Length = 984

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 71/436 (16%), Positives = 145/436 (33%), Gaps = 31/436 (7%)

Query: 72  FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI--SDKGDIYKGCYSGWYS 129
           FV    R   +M D   I Y       ++  +        +          +  +    S
Sbjct: 363 FVKDADRPIIEMLDQRGILY-------KEEQYSHSYPFCWRCGSPLLYYARESWFIAMKS 415

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           LRD    N++++        Y    N +  +E+  +      +    L+ +         
Sbjct: 416 LRDNLMANNEKINWYPAHLKYGRFGNFLDNIED--WALSRERFWGTPLNIWICANCGKEF 473

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTT 242
                + +           L R   D  +   DD          ++  W D+        
Sbjct: 474 CVGSVKELKERAKNSVSRDLHRPYIDDVVFECDDCGGEMRRVGDVIDCWYDSGAAPFAQW 533

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
            Y    D    + +PAD      D     F+++   +  +    P    +     +  KG
Sbjct: 534 HYPFEKD-EFERNFPADFITEAIDQTRGWFYSLLAISTTIFDTAPYLNVLSLGHILDEKG 592

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV+D    +++ G DALR++         D  + + G+ ++    L     +
Sbjct: 593 VKMSKSKGNVVDITSTLDKEGADALRWYFYTAGPLSDDVRFTEKGIIEKQKKFLNTLWNS 652

Query: 361 LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                   ++ +++              D  I+S  + + +E+  +++   IH A  ++ 
Sbjct: 653 YFFFVTYAVIDEFNPNKKEIPVEKRNAMDRWIISRLNTLTKEVIVSIERFEIHVAARKME 712

Query: 419 SLV--SEVDRYF--DAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +     + Y     ++ W ++   + D A        EV+  L  LL  FVP +   I
Sbjct: 713 EFIVNDLSNWYIRRSRRRFWIVEADFDKDSA---YITLFEVLVSLCKLLAPFVPFITEHI 769

Query: 474 FDILFVADENRCFQSL 489
           +  L     +   +S+
Sbjct: 770 YQKLVRGVSDDVLESV 785



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 19/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K          N  PH GH    ++ D++ R+  + G  V    G D HG  +   
Sbjct: 38  KGCKKFVFIEGPPTANGLPHPGHILTRVVKDLVLRYRTMQGYYVERKAGWDTHGLPVEIE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V +  + + +    +   I  D    T + ++
Sbjct: 98  VEKNLRINTKGEIENYGIEKFNKKCKDSVFRYEKEWVNATKRVGFWIDMDSPYITFDNKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            ++     K+I  KG +YKG     Y  R E   +  EV +G 
Sbjct: 158 IESVWWSLKEIWKKGLLYKGHKVVPYCPRCETTLSSHEVAQGY 200


>gi|307110820|gb|EFN59055.1| hypothetical protein CHLNCDRAFT_55974 [Chlorella variabilis]
          Length = 873

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D++AR+ R+ G +VL   G D  G    +
Sbjct: 32  TSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIMARYKRMRGFNVLHPMGWDAFGLPAEQ 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V  D+N   FR     L  SYD    + T + R++   + ++ ++ ++G 
Sbjct: 92  YAIQTGTHPAVTTDKNIARFRQQLQSLGFSYDWRREVSTCDPRYYRWTQWIFLQLFNQGL 151

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV  M  + +  R++AY D+LL 
Sbjct: 152 AYQAEVPVNWCPALGTVLANEEVIDG----VSERGGHPVVRMPMKQWMLRITAYGDRLLQ 207

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         E +   I   +
Sbjct: 208 DLEGLDWADSIKEMQRNWIGRSE 230



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 79/195 (40%), Gaps = 38/195 (19%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV++P +V+ + G D+LR + +          +   G++         G+  
Sbjct: 645 HKMSKSRGNVVNPDDVVWQYGADSLRLYEMFMGPLRDTKVWSTKGVE---------GVHR 695

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   ++ +      P   A    D+  L +  + ++++ E  +    +  LA ++  
Sbjct: 696 FLARVYRLVTE-----QPLSDAPPSQDQ--LRLLHQTIKKVTEETEEMRFNTGLAAMMEF 748

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+   ++    +P         +A+         +    +LL  + P LA +++ +L  +
Sbjct: 749 VNGAYKW--EARP---------KAA---------LEPFLLLLAPYAPHLAEEMWSVLGHS 788

Query: 481 DEN--RCFQSLDQRL 493
                  +   D+ L
Sbjct: 789 GSLAYEPWPEADESL 803


>gi|218290418|ref|ZP_03494548.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239546|gb|EED06740.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 801

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH     I+DV +R+ +L G ++L   G D  G     
Sbjct: 28  SGKPKYYCLDMFPYPSGSGLHVGHWRGYTISDVWSRYKKLHGYEILHPMGWDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  ++  +QN  NF+   + +     +D  + TT+   +   +  + K+ ++G 
Sbjct: 88  YAIQNGIHPRIATEQNIANFKRQLEEIGAMYDWDREVNTTDPSFYKWTQYFFVKMFERGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    ++EV  G           PV   E E +  +++ Y D+LL+
Sbjct: 148 AYRKKMPINWCPSCKTGLANEEVVDG----CCERCGAPVTRREMEQWMLKITDYADRLLN 203

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++   ++R          G
Sbjct: 204 DL-DKLDWPEHVKRMQRAWIGRSEG 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 130/366 (35%), Gaps = 61/366 (16%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGL 204
           Q  P        + F    Y  + +          +P+            E      +G 
Sbjct: 404 QAEPAVSYRLRDWVFARQRYWGEPIPIVYCQVCGTVPVPEDQLPVLLPDVERYEPTGTGE 463

Query: 205 KDLSLSRKTFDWGIKIPDDPQY----IMYVW---IDALTNYLTTTGYLDNPDGSKAKFW- 256
             L+      +        P       M  W         Y       +        +W 
Sbjct: 464 SPLAAIESFVNTTCPKCGGPAKRETDTMPQWAGSCWYFLRYADPHNDKEPFSREAVNYWL 523

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D+++ G +    H +Y   ++        +  + P  +++F+ G I   G K+SKS G
Sbjct: 524 PVDMYIGGVEHAVLHLLYSRFYVKFIYDLGLIDFDEPF-QRLFTQGMITLNGAKMSKSKG 582

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P ++I   GVDALR + +      +D  +  +GL+         G+   ++R   +
Sbjct: 583 NVVNPDDIIARYGVDALRMYEMFVGPPEEDAEWSTNGLE---------GVARFLARVYRL 633

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             +  D ++P   + T        +  R +  + E M++  ++ A++  +  V+ + +  
Sbjct: 634 YAQQVDKLVPERPSLT-------KLRHRFVATLTERMESFRLNTAVSAFMEYVNNLQQ-- 684

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCF 486
                    K   DRA          +  LAI +  F P L  +++++L   D    + +
Sbjct: 685 -------EAKDGLDRA---------TLETLAIAIAPFTPHLGEELWEMLGHTDSVFEQSW 728

Query: 487 QSLDQR 492
            + D+ 
Sbjct: 729 PTYDEA 734


>gi|86747511|ref|YP_484007.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123099264|sp|Q2J364|SYL_RHOP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86570539|gb|ABD05096.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 874

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 71/203 (34%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGHNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N  + +     + +S D      T +  ++   + ++      G   +
Sbjct: 93  ERKVAPKAWTYDNIASMKKQLQTMGLSLDWAREFATCDPTYYKHQQKMFLDFLKVGLAER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y   LL   E
Sbjct: 153 ETRKLNWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITRYAQDLLDALE 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +            GL
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 14/181 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G+K    +     +  
Sbjct: 629 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVKGA--SRFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +V+ + ++           P  F     ++       L ++   ++    + +LA +   
Sbjct: 687 MVNDAAAIARS---APAERPATFGPEALAVRKAAHGALDKVLSGIERLAFNVSLAHIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               + + +A     L K           +  E    L  L    +P LA + +  L   
Sbjct: 744 ---ANSFGEA-----LAKPGQPSPDLAWAI-REAAVILVQLFHPMMPHLAEECWAALGRP 794

Query: 481 D 481
            
Sbjct: 795 G 795


>gi|329121046|ref|ZP_08249677.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471208|gb|EGF16662.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 828

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y+     YP+   H+GH     I DV+ARF ++ G +VL   G D  G     A
Sbjct: 35  ENKPKYYVLEMFPYPSGNLHMGHVRNYSIGDVIARFKKMQGFNVLHPMGYDAFGMPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N +N       L +SYD  I   T ++ ++   + L++    +G  
Sbjct: 95  AIQNGIAPSKWTYSNIKNMIRQQTELGLSYDWDIDVLTCKEDYYKHTQKLFEVFYKRGLA 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +         +++V  G          + V+      +FF+++ Y ++LL  
Sbjct: 155 YKKEAKVNWCNGCHTVLANEQVENGK----CWRCKSIVEKKNLSQWFFKITDYAERLLKD 210

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++           G
Sbjct: 211 LDLLEGWPERVKSMQRNWIGKSEG 234



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 119/343 (34%), Gaps = 39/343 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+   ++ G            L          L     N+     K      
Sbjct: 434 QRYWGCPIPIICCKDCGNVPVPEKDLPVKLPEDVDFISGTLSPLETNKEFLNCKCPKCGK 493

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              Y  +       +  K+ +W   D ++ G +
Sbjct: 494 DALRET---------DTMDTFIDSSWYFLRYTDSKNENIPFEKEKSDYWMQVDQYIGGIE 544

Query: 267 ILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
               H +Y   F+       L  +    K +   G +L  G K+SKS+GNV+ P E++ +
Sbjct: 545 HAILHLLYSRFFMKVLYDEGLVRDSEPFKNLLCQGMVLKDGGKMSKSVGNVVSPEEIVSK 604

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R F++      KD  +   G++         G    + R   ++ +  +    +
Sbjct: 605 YGADTARLFILFAAPPEKDLEWSDKGVE---------GAYRFLKRVWIIVDRFINLKTES 655

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                E+++++     R + ++  ++      + A++ ++ LV+++  +           
Sbjct: 656 REELNENEKALRRRLHRSIAKVTSDLNGKFSFNTAISSIMELVNDMYHF----------- 704

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +   +     V  E +R L ILL  FVP +  +++  +   +
Sbjct: 705 -SETESIVSESVVNECLRNLIILLAPFVPHITEELWQHIHQNE 746


>gi|302335806|ref|YP_003801013.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319646|gb|ADK68133.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 854

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 74/202 (36%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 41  KPKRYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFDVLHPMGFDAFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  QN          +  S  YD    T +  ++   + ++ K+ ++G  Y+
Sbjct: 101 KHHTQASRWTHQNIAQTVKTMRRMGFSYDYDRMFNTCDPEYYRWGQWMFIKMWERGLAYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G          +  +  E   ++ R++ Y  +LL   +
Sbjct: 161 ATSPVNWCPTCQTVLANEQVVDG----RCWRCGSVPEKRELSQWYLRITDYAQELLGDLD 216

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++ +         G
Sbjct: 217 RLDGWPENVKAQQRNWIGRSEG 238



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 92/281 (32%), Gaps = 29/281 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--- 278
           D              Y              A+ W P D ++ G +    H +Y   +   
Sbjct: 523 DTMDTFTCSSWYYLRYADPHNDNLPFSREAARRWMPVDNYIGGIEHAILHLLYSRFWTKV 582

Query: 279 -----LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +L  + P    +         G+ +SKS GNV+ P  VIE  G D +R  ++   
Sbjct: 583 MRDLGMLDVDEPFTNLLCQGMVKDEHGDTMSKSKGNVVPPSSVIEPYGADTMRLAILFIA 642

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGAFTESDESILS 392
              KD  +D + +        AN       R V  + +  D  ++    A       +  
Sbjct: 643 PPEKDFDWDPEAVAG------ANRFIKRAWRVVWTLARSADRGVVLDAAALGPQARELNR 696

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           V   +      +      + A++ V+ LV+   +Y +          + +R      +  
Sbjct: 697 VLHEMGLRCTSDFDRGQFNTAISAVMELVNAASKYANEV--------SAERRD--GALCW 746

Query: 453 EVIRQLAILLQAFVPKLANKI-FDILFVADE--NRCFQSLD 490
            V   +  +L    P  A ++  + L +A    N  + S D
Sbjct: 747 RVAHDIVAMLAPICPHWAEELHHEALGLAGSVYNEPWPSFD 787


>gi|294495051|ref|YP_003541544.1| valyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666050|gb|ADE35899.1| valyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 865

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/477 (15%), Positives = 157/477 (32%), Gaps = 39/477 (8%)

Query: 36  RFHRLDGLDVLFTTGTDE------------HGQKIAKAAQNAG-VTTKVFVDQNSRNFRD 82
           R+    G +V       E             G  +            + +++ N    + 
Sbjct: 227 RYKENIGENVKVPLFDHEVPVIADKEVDPEFGTGVVMICTFGDKQDVRWWIEHNLPLRKA 286

Query: 83  MAD---VLDISYDDFIRTTEKRHHDTCRILWK--KISDKGDIYKGCYSGWYSLRDEAYYN 137
           +     +  I+       + +      + L +   + D+  + +     W         +
Sbjct: 287 IDRNGFMTGIAGKYEGMKSSECKDAIIQDLKEQGYLYDQDSLDQNVGMCWRCNTPIEILS 346

Query: 138 DDEVYKGADGQYYNAQHNPVQWM------EEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
           + + +   +     A  N + W+        E +   +            + P  +   +
Sbjct: 347 ERQWFVKIENDKILATANEINWIPDYMKIRLENWTNTMEWDWCISRQRIFATPIPVWYCK 406

Query: 192 RRNEVISFVKSGLK---DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           +  + +   +  L      +      + G    +  + ++  W+D+    L  TG+L + 
Sbjct: 407 QCGKSLIAEEEWLPLDPTQTKPPTPCECGSTDFEAEEDVLDTWMDSSLTALHVTGWLTDH 466

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           +       PA L   G DI+R  A Y    +  L  + P    + +   +   G K+SKS
Sbjct: 467 EMRS----PAQLRPQGHDIIRTWAFYSILRSKALQDSRPWDSIMINGMVLGEDGHKMSKS 522

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN+I P EV+++   DA R +     + G D  +    +     +   N + ++   S+
Sbjct: 523 RGNIISPEEVVDQYSSDAFRQWAAIGGSTGSDVMFRWKDVVS--GSRYFNKMWSIFRFSM 580

Query: 367 SMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
           S + +   +       +    D  +LS  +R++  + ENM N     A   +     E  
Sbjct: 581 SHLEELLPEIPEVATSSLGTVDRWLLSKLNRLIISVTENMDNYQFDEAYKSIRGFAWETL 640

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            D Y +  K   L   +        Y     +  L  +L  F P  A +++  +   
Sbjct: 641 ADNYIELVKA-RLYGEDETSKKAARYTLYTTLETLTRMLAPFAPFFAEEVYSHISTG 696



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  I T   YP    HIG++      D +AR+ R+ G +V+F  G D HG      
Sbjct: 32  ENKPQYIIDTPPPYPTGNFHIGNSLNWCYIDFVARYKRMQGFNVMFPQGWDCHGLPTEVK 91

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +     TK                  N    R    +L  S D  +   T +  +    
Sbjct: 92  VEEIHGITKNQVPRAEFRKLCEELTLGNIEKMRQTMRMLGFSVDWSNEFITMKPEYFVKT 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++  +G IY+  +   +  R E
Sbjct: 152 QRSFVQMQKQGRIYQADHPVNWCPRCE 178


>gi|253997805|ref|YP_003049868.1| valyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984484|gb|ACT49341.1| valyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 948

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/405 (15%), Positives = 130/405 (32%), Gaps = 64/405 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H       +     ++      + L+       
Sbjct: 401 PENWVNTYNQWLNNIQDWCISRQLWWGHQIPAWYTDSGKVYVAHDADEAQALAARDGYTG 460

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS-----KAKFWPADLHVIGKDILRF 270
              K+  D   ++  W  +     +T  +  +           ++ P+ + V G DI+ F
Sbjct: 461 ---KLKRDDD-VLDTWYSSALWPFSTLDWTGDEAVDAANQALQQYLPSSVLVTGFDIIFF 516

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------- 319
               +      L+  +P             +G+K+SKS GNV+DPI++I+          
Sbjct: 517 WVARMVMMTTHLTGKIPFKHVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGIDLDALIKK 576

Query: 320 ----------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                                        G DALR+      + G+D  +D    +    
Sbjct: 577 RTTGLMNPKDAEKIEKRTRKEFPEGISAYGTDALRFTFASLASPGRDIKFDLQRCEG--Y 634

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTESDESILSVCSRVLQEIREN 404
            +  N + N  +R V M  +  D  +            F+++D  I+S+  +V  +I   
Sbjct: 635 RNFCNKLWN-ATRFVLMNTEGQDCGLEDCKTKPEGYLSFSQADRWIVSLLQKVEADIERG 693

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +         +   V +   D Y +  K      T  ++ +T     + V+  +  + 
Sbjct: 694 FADYRFDLIAQSIYKFVWDEYCDWYLEIAKTQLQTGTEAEQRAT-RRTLLRVLETILRMA 752

Query: 463 QAFVPKLANKIFDI---LFVADENRCFQSLDQRLKPGFMLHKTFD 504
              +P +  +I+     L   D N+   S+  ++ P     K  +
Sbjct: 753 HPIMPFITEEIWQTVGPLSGRDMNQPGPSIMLQVYPKSQPGKIDE 797



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            + +   I           H+GH +   I D L R+HR+ G + L+  GTD  G      
Sbjct: 42  SKSDNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGDNTLWQPGTDHAGIATQIV 101

Query: 60  -----------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K +     ++  R +    D S + F  T +  
Sbjct: 102 VERQLDAQGVSRHDLGREKFLEKVWEWKEYSGGTITQQMRRLGTSPDWSRERF--TMDAG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +      + ++ ++G IY+G     + ++     +D EV +  +       + P+
Sbjct: 160 LNKVVTESFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQDEEDGSMWHINYPL 215


>gi|325104233|ref|YP_004273887.1| valyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324973081|gb|ADY52065.1| valyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 880

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 119/366 (32%), Gaps = 60/366 (16%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       L Y  +    ++P +  N         +KD  +SR+   W
Sbjct: 350 IEPKLSLQWFCKMGEMAKPALDYVNNGDIKLIPDKFINT-YRHWMENVKDWCISRQ-LWW 407

Query: 217 G--IKIPDDPQY-----------------------------------IMYVWIDALTNYL 239
           G  I     P                                     ++  W  +    +
Sbjct: 408 GQQIPAFYAPNGDVAVAKTAEEALSVLKAKDAKYADLKLEDIKQDEDVVDTWFSSWLWPM 467

Query: 240 TTTGYLDNPDGS------KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +                    ++P +  V   +IL F    +       +  +P      
Sbjct: 468 SVFDPSVCGHPENKGNADFQYYYPTNDLVTAPEILFFWVARMIMAGHEFTGEIPFRNVYL 527

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +       G K+SKSLGN  DP+++I++   D +R  ++     G D  +D+   ++  N
Sbjct: 528 TGIVRDKIGRKMSKSLGNSPDPLDLIDKYSADGVRVGMLLSSPAGNDIMFDEASCEQGRN 587

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                  GN V  +  ++ K ++          +S     +  +  L+EI  N     ++
Sbjct: 588 ------FGNKVWNAFRLV-KGWEVDSSLACQNEKSIAWFEARFNEALKEIESNFDQYRLN 640

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            AL     LV +     Y +  KP   +  +          TV    ++  LL  F+P L
Sbjct: 641 EALMDSYKLVWDDFCAWYLEMVKPAYQQPIDE----VTYKATVNFFERILKLLHPFMPFL 696

Query: 470 ANKIFD 475
             +++ 
Sbjct: 697 TEELWH 702



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 46/157 (29%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARMKGKNACWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + ++      +    L  S  +D    T +     
Sbjct: 92  VAMLKEKGINKKDLTRSEFLKYAYEWKEKYGGIILEQLKKLGASCDWDRTAFTMDPELSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                +  +  KG IY+G     +  +     +D+EV
Sbjct: 152 AVIDTFIHLHKKGLIYRGIRMVNWDPKGLTAVSDEEV 188


>gi|83941787|ref|ZP_00954249.1| leucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83847607|gb|EAP85482.1| leucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 848

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N  + RD    L +S D      T +  ++   + L+     +G +Y
Sbjct: 90  MAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLSEGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S + ++LL   
Sbjct: 150 RKNAIVNWDPVDMTVLANEQVEAG----RGWRSGALVERRELTQWFFKISDHSEELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   ++           GL+
Sbjct: 206 DTLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 124/400 (31%), Gaps = 92/400 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G            L Y  S      P++R          
Sbjct: 427 WGLSRQRYWGCPIPVVHCDTCGVVPEKKENLPIELPYDVSFDTPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y             + + A++W   
Sbjct: 480 -----WRDCACPSCGAPAKRETD-TMDTFVD-SSWYFARFTAPRADTPTNMADAEYWMNV 532

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI-------- 296
           D ++ G +    H +Y      A  ++ +LP            + + +H           
Sbjct: 533 DQYIGGIEHAILHLLYSRFFARAMQITGHLPEKAIEPFNALFTQGMVTHEIYQTRDANDR 592

Query: 297 -------------LHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                        L  G         K+SKS  NV+DP+ +I   G D  R+F++ +   
Sbjct: 593 PVYHLPEDVTDGKLADGTEVEIIPSAKMSKSKKNVVDPLGIIANYGADTARWFVLSDSPP 652

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +        N + N+ SR   M             A    D+ +L    
Sbjct: 653 ERDVEWTASGAEAAYKH--LNRVWNISSRIAEM----------DDSAAGTGDDDLLRAMH 700

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + + ++   +++   + A+A++ +  +             L+K+   +A+       E I
Sbjct: 701 KTIHDVTMGVESFGFNAAIAKLYAFTA------------TLQKSKAGKAAQ-----REAI 743

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
             LA L+    P LA +I+             +   D+ +
Sbjct: 744 MTLAQLMAPMTPHLAEEIWTAQGGDGLITTSTWPQADEAM 783


>gi|135184|sp|P28350|SYV_NEUCR RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
          Length = 1093

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 130/415 (31%), Gaps = 93/415 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                + ++ M  E ++ R+    +  L   E     I P     +      + ++D  +
Sbjct: 496 CEKSKDVIEPMMTEQWWVRMKEMGEAALQVVEEGKVKISPESAT-KSYKRWLADIQDWCI 554

Query: 210 SRKTFDWGIKIP---------------------------------------------DDP 224
           SR+   WG +IP                                              DP
Sbjct: 555 SRQ-LWWGHRIPAYRVIFEGEEGQRENEKSEWVVGRTQEEAQAKAEAKFAGRKFTLEQDP 613

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
              +  W  +    +   G+ +  +    KF+P  +   G DIL F    +   +  ++ 
Sbjct: 614 D-CLDTWFSSGLWPMAILGWPNTENLDFKKFFPTSMLETGWDILFFWVSRMIMLSLKMTG 672

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------- 317
            +P  +          +G K+SKSLGNVIDP+++I                         
Sbjct: 673 EVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIIRGIELEDLHAKLLVGNLKEEEVARA 732

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DA+R+ L+     G D  +D             N I       
Sbjct: 733 TKYQKTAFPGGIPECGADAMRFTLLSYTTGGGDINFDIR--VMHAYRRFCNKIWQASKYV 790

Query: 366 VSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           +  + +D+        A F+  ++ IL   +  ++ + E ++ +   RA         + 
Sbjct: 791 LGKLPQDFMPKGELDTANFSVPEKWILHRMNVAVKGMNEALEAREFSRATKVAYQFFYDE 850

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D + +  K   L    P+   +V       +     LL   +P +  +++  L
Sbjct: 851 LCDVFIENSK-GILSDGTPEEQQSVQQTLYHALDVALRLLHPIMPYITEELWQRL 904



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I           H GHA    + D L R++R+ G + L+  G D  G       +  
Sbjct: 171 KFVIPLPPPNVTGALHCGHALANSLQDTLIRWYRMKGYETLWVPGCDHAGISTQSVVEKM 230

Query: 66  GVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +  +   +   ++  S D      T +K      
Sbjct: 231 LWKKEKKIRQELGREKFTDLVWEWKGEYHQRINNAQKLMGGSMDWSREAFTMDKNLTAAT 290

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              + ++ D+G IY+      +   
Sbjct: 291 METFCRLHDEGLIYRSNRLVNWCTH 315


>gi|225376629|ref|ZP_03753850.1| hypothetical protein ROSEINA2194_02271 [Roseburia inulinivorans DSM
           16841]
 gi|225211512|gb|EEG93866.1| hypothetical protein ROSEINA2194_02271 [Roseburia inulinivorans DSM
           16841]
          Length = 1054

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/396 (14%), Positives = 130/396 (32%), Gaps = 19/396 (4%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR---DEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++       K  + K D+ +   +  +         + +  E  +            P+ 
Sbjct: 411 YYARESWFIKMTAVKDDLIRNNNTVNWIPESIGKGRFGDWLENIQDWGISRNRYWGTPLN 470

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E EG   + S      L+    +P+       R  +           +++ K  D G 
Sbjct: 471 VWECEGCGHQESIGSRAELAERSGNPDDAKVELHRPYID----------AVTFKCPDCGK 520

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            +   P+ ++  W D+         Y    +    + +PA       D     F+++   
Sbjct: 521 TMHRVPE-VIDCWFDSGAMPFAQHHYPFENEDLFKQQFPAQFISEAVDQTRGWFYSLMAE 579

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + LL    P    +         G+K+SKS GN +DP + +E  G DA+R++     A  
Sbjct: 580 STLLFNKAPYENVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAIRWYFYINSAPW 639

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
               +    +++     L+          +   +  +D           +  D+ +LS  
Sbjct: 640 LPNRFHGKAVQEGQRKFLSTLWNTYAFFVLYANIDGFDATKYKLEYDKLSVMDKWLLSKL 699

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           + V+  + +N+ +  I  A   +   V ++ + Y    +     K               
Sbjct: 700 NTVIGAVDDNLGSYKIPEAARALDEFVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYT 759

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            + ++       +P +  +I+  L  + +    +S+
Sbjct: 760 ALVEICKCAAPMIPFMTEEIYQNLVCSIDKNAPESI 795



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KQGETYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYQTMKGKYVPRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      ++   T +   
Sbjct: 96  VEKMLGLNGKEQIEEYGMEPFIKKCKESVWKYKGMWEDFSGTVGFWADMENPYVTYDDNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSSQEVAQGYK 199


>gi|315231914|ref|YP_004072350.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315184942|gb|ADT85127.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 1065

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 78/406 (19%), Positives = 158/406 (38%), Gaps = 21/406 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKG---CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              T +   K    K  I K      + +       + N                  P+ 
Sbjct: 413 FRATEQWFLKVSKVKEQIIKENDEKVTWYPDWVKIRFDNGVRDSGDWVISRQRYWGIPLP 472

Query: 159 -WMEEEGYFFRLSAYQDKLL--SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W  E+G  + + ++++ +      E + E I   E   E +  ++  L    L R   D
Sbjct: 473 IWQSEDGEIYIVGSFRELVELAVALEVNGERIELPESYEEKLKVIEEKLGPEDLHRPYVD 532

Query: 216 -WGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            + IK+          ++ VW D+      + GY    +    K WPAD  V G+D +  
Sbjct: 533 AFIIKVNGKEMKRIKDVLDVWFDSGIASWASLGYPREKE-LFEKLWPADFIVEGEDQVTK 591

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    + +    +P          +  KG+K+SKSLGN+I P EV+++ G DA R++
Sbjct: 592 WFYSQQAASVIAFDTVPYRHVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDAFRFY 651

Query: 329 LVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           ++      ++  +   GL + +   ++   +  L +  +S+   +   + P    F E D
Sbjct: 652 MLWATTPWENLRFSWKGLAQVKRMLNILWNVYILAATYMSLDKFEPGKVNPEELPFREED 711

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDR 443
           + +LS  + +++ +   ++   + RA   +   V       Y     ++ W  +  +PD+
Sbjct: 712 KWVLSRVNSLVETVTNGIETFYLTRATRGIYDFVVEDLSRWYVRLIRKRLWV-EGDDPDK 770

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +   +   +V   L  L+  F P +A  I+  +    E+   +  
Sbjct: 771 LAA-YWTLWKVFDVLLRLMAPFTPYIAEAIYQNMIARKESVHMEDW 815



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 20/159 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K Y      Y +   H+G A+  II D++ RF  + G +V    G D HG  I    
Sbjct: 38  DGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKV 97

Query: 63  QNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
           + A                      + F  +N +   +   +L +   +D+   T +  +
Sbjct: 98  EQALGLKIKKDIEEKIGVDNFIKKCREFALRNLKIMTEQFKMLGVWMDWDNPYMTIKNEY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            ++     KK  +KG + K      +  R E    + EV
Sbjct: 158 IESAWFTLKKAWEKGLLEKDMRVLHWCPRCETALAEHEV 196


>gi|119964190|ref|YP_947987.1| leucyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119951049|gb|ABM09960.1| leucyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 865

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 74  SRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGFDVLHPIGWDSFGLPAENAA 133

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            IS D    + T++  ++   + L+K+  ++G  Y
Sbjct: 134 IKRNAHPSEWTYANIDTQAASFKRYAISADWSRRLHTSDPEYYRWTQWLFKRFYERGLAY 193

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D     +++V  GA          PV       ++F+++ Y D+LL   
Sbjct: 194 RKDSPVNWCPKDLTVLANEQVVNGA----CERCGTPVTKKSLNQWYFKITDYADRLLED- 248

Query: 181 ESHPEFILPIERRNEVISF 199
               +   P        ++
Sbjct: 249 MDQLQGHWPERVLAMQRNW 267



 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 112/312 (35%), Gaps = 42/312 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFW-PADLHV 262
            ++ +  + G     D    M  ++D  + Y       D      D  K   W P   +V
Sbjct: 526 WVNVECPNCGRAAQRDTD-TMDTFVD-SSWYFLRFVSPDYTEGPFDPEKINNWMPVGQYV 583

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F         + AN P    + + G +L+ G+ +SKSLGN +D  
Sbjct: 584 GGVEHAILHLLYARFFTKVIKDIGLIEANEPF-SALLNQGQVLNGGKAMSKSLGNGVDLG 642

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E +++ GVDA+R  +V       D   D   +    +A         ++R+  +     D
Sbjct: 643 EQLDKFGVDAVRLTMVFASPPEDDV--DWADVSPSGSAKF-------LARAWRL---GQD 690

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                       D ++ +V  + + +  E + N   +  +A+++ LV+            
Sbjct: 691 VSSEPGVDPATGDRALRTVTHKTIADAAELLDNNKFNVVVARLMELVNAT---------- 740

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
             +KT    A        E +  +A++L  F P  A  +++ L       N  +   D  
Sbjct: 741 --RKTIDSGAGAADPAVREAVEAVAVILSLFAPYTAEDLWNTLGHPASVANAGWPKHDDA 798

Query: 493 LKPGFMLHKTFD 504
           L     +     
Sbjct: 799 LLVQDTVTAVVQ 810


>gi|312127589|ref|YP_003992463.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777608|gb|ADQ07094.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 920

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 23/302 (7%)

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G    +    IM VW D+ +++             +   WP D+++ G D     F + 
Sbjct: 519 CGCSEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWFQSS 572

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A       P    +     +  +G+K+SKS GNVI P ++I E G D LR + V   
Sbjct: 573 LLTAVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCVSAD 632

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESIL 391
               D    KD +K+    ++   I N   R +   L D+D      G     E D+  L
Sbjct: 633 YTT-DMRISKDIIKQL--TEIYRKIRNTA-RFLLGNLYDFDPKTDKVGYENLKEIDKWAL 688

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRASTVL 448
               ++++++ +  +    ++    V +   +   + Y D  K      K+      +  
Sbjct: 689 QRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRRSAQ 748

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFMLHKT 502
            V  E++  L  L+   +   A +I+  +   +E+        + S+++ +     L + 
Sbjct: 749 TVMYEILIALTKLIAPILSFTAEEIWQNIAFKEEDAESVFLTSWPSINEGILRDEALREK 808

Query: 503 FD 504
           +D
Sbjct: 809 WD 810



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R     L +   +++   T + +     
Sbjct: 105 VIKKFGVNRHEVDPVEFRKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             ++ +++ KG IYKG    ++    E    + E+    D  Y       V+
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTYSIYVKFEVE 216


>gi|73748126|ref|YP_307365.1| leucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123746148|sp|Q3ZWQ1|SYL_DEHSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|73659842|emb|CAI82449.1| leucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 813

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 6/252 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLRGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHNIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V  G           P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQVVDGT----CWRCETPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                 +   +RN V     + +         F+  IK+       +Y     +      
Sbjct: 208 LDWPEKITAMQRNWVGKSYGAEVSFALDCPTAFEKEIKVFTTRPDTIYGVTFMVLAPEHP 267

Query: 242 TGYLDNPDGSKA 253
                    +KA
Sbjct: 268 LVEKITTPENKA 279



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 38/286 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D  K K+W P DL+  G +    H  Y   
Sbjct: 489 KRETDTMDTFMCSSWYFLRYTSPGYDKGPFDPVKLKYWMPVDLYTGGAEHAVMHLFYSRF 548

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F        ++    P  KK+F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L
Sbjct: 549 FTKALRDMGIIDFGEPF-KKLFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYL 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      + G ++  GL          G+   ++R  ++  ++Y        A  E++  
Sbjct: 608 MFVGPWDQGGEWNDSGLS---------GMSRWLNRVWNLFTEEYTPQ----TASAEAERE 654

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + +++I  +++    +  +A ++ L +             L K     A +   
Sbjct: 655 LKRTLHQTIKKITMDIERLRFNTVVAALMELSN------------SLAKLKETAAISAEN 702

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRL 493
                ++  A++L    P +A +++  L +  +  N+ + + D+ L
Sbjct: 703 W-QNTLQTFALMLAPVAPHIAEELWANLGMKYSIHNQNWPTWDEEL 747


>gi|153932381|ref|YP_001382506.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934659|ref|YP_001386058.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|152928425|gb|ABS33925.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930573|gb|ABS36072.1| isoleucine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 1038

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYILYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|168177431|ref|ZP_02612095.1| isoleucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670581|gb|EDT82555.1| isoleucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 1038

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYILYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|229586699|ref|YP_002845200.1| leucyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511550|sp|C3PNE7|SYL_RICAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|228021749|gb|ACP53457.1| Leucyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 835

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAEHA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N +N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKKWTYSNIKNMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V     + +F +++ Y ++LL+ 
Sbjct: 144 YQKESFVNWDPVDNTVLANEQVVDG----RGWRSGAIVVKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 126/389 (32%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEICGIVPVPYKDLPVILPDDVNFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFMRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N +  +     S+               +E ++ +  +    ++ + E+
Sbjct: 645 GIEG--CSRFINKLEYMFKAIDSL----------KDDVNSEVNKELNRLVHFTIKHVAED 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D   TV +        L  LL  
Sbjct: 693 IKHFALNRAIARMRELSNAISA--------EISKDKID-VKTVRH----GFNVLVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKERLYNLSFPAFDE 768


>gi|148378106|ref|YP_001252647.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|148287590|emb|CAL81655.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
          Length = 1040

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 381 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 440

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 441 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 500

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 501 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 559

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 560 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 619

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 620 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYILYADLDNFNPLEYKEFKSEHVMDK 679

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 680 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 739

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 740 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 787



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 38  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 97

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 98  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 158 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 201


>gi|311113646|ref|YP_003984868.1| leucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945140|gb|ADP41434.1| leucine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 831

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+   H+GHA    I D+ AR+++  G DVL   G D  G     AA 
Sbjct: 41  KGRRYVLDMFPYPSGDLHMGHAEAFAIGDMNARYYKQCGYDVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +  +N     +      I   +D  + T++  ++   + L+++   +G  Y+
Sbjct: 101 KNGTHPKEWTYKNIDTQAESFKRYAIAVDWDRRLHTSDPEYYKWTQWLFEQFYKQGLAYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +D+    +++V  GA           V       ++F+++ Y  +LL   E
Sbjct: 161 KDSMVNWCPKDQTVLANEQVVNGA----CERCGTTVTKKSLNQWYFKITDYAQQLLDDME 216

Query: 182 SHPEFI 187
                 
Sbjct: 217 QLEGKW 222



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 101/273 (36%), Gaps = 38/273 (13%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y++        D    + W A D++V G +    H +Y   F         +   
Sbjct: 520 WYFLRYVSPRYAEGPFDPQAIREWGAVDMYVGGVEHAILHLLYARFFTKVIRDLGLIEHG 579

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K + + G +L+ G+ +SKSLGN ++  E ++  GVDA+R  ++       D   D 
Sbjct: 580 EPF-KALMNQGQVLNGGKAMSKSLGNGVNLGEQLDTFGVDAVRTTMIFASPPEDDV--DW 636

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIR 402
             +    +         +     S            PG    S D ++  + +R + +++
Sbjct: 637 ADVSPAGSQKFLARAWRVAQDVTS-----------EPGVDAASGDANLHKLVARTVHDVK 685

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           + + +   +  +A+ + LV+   +  D+         +P           E    +AILL
Sbjct: 686 QLLDSGKFNVVVAKTMELVNATRKAVDSGS----GGADPA--------VREATETIAILL 733

Query: 463 QAFVPKLANKIFDILFVADENRC--FQSLDQRL 493
             + P  A  ++  L   +      F  +D+ L
Sbjct: 734 SLYAPYTAEDMWHALGHDNPVLTAGFPQVDESL 766


>gi|255660428|ref|ZP_05405837.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 757

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 140/376 (37%), Gaps = 52/376 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  + +F  L   +D                +R N+ +S   + LK   +SR+   W
Sbjct: 354 VEPMLSKQWFVDLPKLKDH----LYLKKYPDFIPKRFNKQVSNWLNKLKPWCISRQ-LIW 408

Query: 217 GIKI-----------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G KI                           + ++  W  +    L    +  +    + 
Sbjct: 409 GHKIPVWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSSLWPLICLNWEQDDSFHE- 467

Query: 254 KFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
                +L V G DIL F    + + +F  +  LP    +        +  K+SKSL N I
Sbjct: 468 ----TELLVTGYDILFFWVLRMLFNSFFETKKLPFKTVLIHGLVRDEQNRKMSKSLNNGI 523

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP+++I   G DA+R FL      G D  + +  +K   N    N + N+    +   L+
Sbjct: 524 DPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWN--FLNKLWNVTKFVIQ--LE 579

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +   +       + S+  IL+   +V+Q+I + +    +  A   ++  V +   + + +
Sbjct: 580 NDQEISYDLDKLSLSETWILAKLDKVIQKITKLLDKFQLALANQILVKFVWDDFCNTFIE 639

Query: 430 AQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
           A       K  P++    + Y    V+  +AILL   VP L+ +I+        N+    
Sbjct: 640 A------IKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIYQQFN----NKSVMQ 689

Query: 489 LDQRLKPGFMLHKTFD 504
               L     + K FD
Sbjct: 690 ATWPLATKIKIPKLFD 705



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 25/152 (16%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K++   + +  +  PN     HIGHA+E+ I D + RF ++ G  + +  G D  G    
Sbjct: 33  KDKNNSF-TAILPPPNLTGTLHIGHAFEVSITDQIMRFKKMQGFSINWIPGFDHAGIATQ 91

Query: 60  KAAQNAGVTTKV----------------FVDQNSRNFRDMADVLD----ISYDDFIRTTE 99
              +   +                    +    S   ++    L      S   F  T  
Sbjct: 92  TKYEKIALKENQKYFDADDDKKSEMIMNWALNQSEIIKNQLKSLGVCLNWSETKF--TLS 149

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
           ++ +      +K + + G IY+      +  +
Sbjct: 150 EQANKIVNNCFKNLYENGFIYQAYTLVNWDTK 181


>gi|226947322|ref|YP_002802413.1| isoleucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841621|gb|ACO84287.1| isoleucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 1038

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 139/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  N   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYILYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L V  +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWP 785



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEHFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T +  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|94496575|ref|ZP_01303151.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423935|gb|EAT08960.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 851

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 6/204 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+ + HIGH     + DVLARF R+ G +VL   G D  G     AA 
Sbjct: 32  KPRSYVLEMFPYPSGRIHIGHVRNYSMGDVLARFRRMTGHEVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N  N R     L   I +   + T E  ++   + L+  + + G +Y+
Sbjct: 92  EKKVHPGDWTRSNIANMRAQLKKLGFAIDWSRELATCEPDYYGHEQALFLDMLEAGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              S  +   D     +++V  G           PV+  +   +F +++ + D LL   +
Sbjct: 152 KESSVNWDPVDMTVLANEQVIDGKG----WRSGAPVEKRKLNQWFLKITQFADDLLDGLK 207

Query: 182 SHPEFILPIERRNEVISFVKSGLK 205
           S  ++   +    E       GL+
Sbjct: 208 SLDQWPEKVRTMQENWIGKSVGLQ 231



 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 57/372 (15%), Positives = 121/372 (32%), Gaps = 63/372 (16%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHN---PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
           + Y+         DG           PV   E+  +    +         +   P    P
Sbjct: 437 QRYWGTPIPVIHCDGCGVVPVPKDQLPVVLPEDVSFDIPGNPLDRHPTWKHVDCPACGKP 496

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
             R  + +            S     +  +  D P     V                   
Sbjct: 497 ARRETDTLDTFAD------SSWYFIRFASQPKDRPFDRATVEQWLPVGQYIGGVEHAILH 550

Query: 250 GSKAKFWPADLHVIGK-DILRFHAIYWP--------------AFLLSANLPLPKKVFSH- 293
              A+FW   L  +G+          +               ++L    +      ++H 
Sbjct: 551 LLYARFWTRALQHMGQLGFAEPFIGLFTQGMVTHETYKAGDGSWLSPGEVKKSGDDYTHI 610

Query: 294 ----GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                  + + EK+SKS  NV+DP ++IE+ G DA+R+F++ +    +D  +   G++  
Sbjct: 611 ESGAPVTVGRVEKMSKSKKNVVDPDDIIEQYGADAVRWFMLSDSPPERDLPWTDSGIEGS 670

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                       V+R   +  +          A    D+++     + +  + +++++  
Sbjct: 671 ---------WRFVNRVWRLFAE-------ADAAAEGQDKALDRKLHQTIDGVAKDIESLG 714

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            ++A+A++  LV+             ++K  P  + T        IR LA+L+    P L
Sbjct: 715 FNKAVAKIYELVNA------------IEKARPSASRTT------AIRTLALLVAPMTPHL 756

Query: 470 ANKIFDILFVAD 481
           A + +  +   +
Sbjct: 757 AEEGWAQMGQDN 768


>gi|15602683|ref|NP_245755.1| valyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|81636973|sp|Q9CMK5|SYV_PASMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12721124|gb|AAK02902.1| ValS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 954

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 76/450 (16%), Positives = 146/450 (32%), Gaps = 94/450 (20%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
               +  +E    D+         Y +    P++ M  + ++  +    +  +   E   
Sbjct: 348 KQIVADFEELGLLDEIKPHDLKVPYGDRGGVPIEPMLTDQWYVSVKPLAEVAVKAVEDGE 407

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV------------ 230
              +P +  N   S+++  ++D  +SR+   WG  I    D Q  +YV            
Sbjct: 408 IQFVPKQYENLYFSWMRD-IQDWCISRQ-LWWGHRIPAWYDEQGNVYVARDEAEVRAKHN 465

Query: 231 ----------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                           W  +     +T G+       K      D+ + G DI+ F    
Sbjct: 466 LPADLALKQDEDVLDTWFSSGLWTFSTLGWPKQTPDLKMFH-STDVLITGFDIIFFWVAR 524

Query: 275 WPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-------- 318
              F +           +P      +      +G+K+SKS GNVIDP+++I+        
Sbjct: 525 MIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVIDPLDMIDGIDLESLL 584

Query: 319 -----------------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                                        E G DALR+ L      G+D  +D   L+  
Sbjct: 585 EKRTGNMMQPQLAEKIAKATIKAFPEGIAEHGTDALRFTLTALATNGRDINWDMKRLEGY 644

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQN 407
            N        N +  +   +L + D +  + G   ++ +D  I S  +R ++  R  +  
Sbjct: 645 RN------FCNKLWNASRFVLTN-DKLDLSEGSVEYSVADRWIQSEFNRTVEAFRNALAQ 697

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                    +         D Y +  KP  L   +  +        + V+ +L  L    
Sbjct: 698 FRFDLCATALYEFTWNQFCDWYLELTKP-VLVNGSVAQKRGASQTLINVLEKLLRLTHPV 756

Query: 466 VPKLANKIFDIL----FVADENRCFQSLDQ 491
           +P +  +I+  +     V+ +    Q+  Q
Sbjct: 757 MPFITEEIWHKVKAFAGVSGDTIMLQAFPQ 786



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I+          H+GHA++  + D+L RF+R++G + L+ TGTD  G      
Sbjct: 36  TSKPSYSIAIPPPNVTGSLHMGHAFQQTLMDILIRFNRMEGHNTLWQTGTDHAGIATQMV 95

Query: 62  AQ---------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEK 100
            +                     K++  +       S+  R + + +D   + F  T ++
Sbjct: 96  VERKIAAEEGKTRHDYGREAFIDKIWDWKAYSGGTISQQMRRLGNSIDWERERF--TMDE 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              D  + ++ ++ ++G IY+G     +  +     +D EV              P+
Sbjct: 154 GLSDAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPL 210


>gi|273067912|gb|ACZ97545.1| methionyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 254

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 4/155 (2%)

Query: 360 NLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           NL++R+V+MI K  D  ++    A T+ D  +    S V+ E +E M       ALA + 
Sbjct: 2   NLLNRTVAMINKYQDGRLVGNNTATTDFDADLEQTASDVIAEYKELMDKTRFAEALAAIW 61

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            LVS  ++Y D  +PW L K +  +   S V+    + +R +A L+Q  +P   ++I   
Sbjct: 62  KLVSRANKYIDETEPWVLAKDDSKKETLSDVMTHLAKSLRVIAALIQPIMPNAPHQIAQQ 121

Query: 477 LFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
           L +   +     L          +     PIFPR 
Sbjct: 122 LGIEGTDLSLVDLQFNDFPAEAQVVAKGTPIFPRL 156


>gi|289432203|ref|YP_003462076.1| leucyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945923|gb|ADC73620.1| leucyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 813

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 6/252 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLRGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHNIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V  G           P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQVVDGT----CWRCETPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
                 +   +RN V     + +         F+  IK+       +Y     +      
Sbjct: 208 LDWPEKITAMQRNWVGKSYGAEVSFALDCPTAFEKEIKVFTTRPDTIYGVTFMVLAPEHP 267

Query: 242 TGYLDNPDGSKA 253
                    +KA
Sbjct: 268 LVEKITTPENKA 279



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 38/286 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D  K K+W P DL+  G +    H  Y   
Sbjct: 489 KRETDTMDTFMCSSWYFLRYTSPGYDKGPFDPVKLKYWMPVDLYTGGAEHAVMHLFYSRF 548

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F        ++    P  KK+F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L
Sbjct: 549 FTKALRDMGIIDFGEPF-KKLFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYL 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      + G ++  GL          G+   ++R  ++  ++Y        A  E++  
Sbjct: 608 MFVGPWDQGGEWNDSGLS---------GMSRWLNRVWNLFTEEYTPQ----TASAEAERE 654

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + +++I  +++    +  +A ++ L +             L K     A +   
Sbjct: 655 LKRTLHQTIKKITMDIERLRFNTVVAALMELSN------------SLAKLKETAAISAEN 702

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRL 493
                ++  A++L    P +A +++  L +  +  N+ + + D+ L
Sbjct: 703 W-QNTLQTFALMLAPVAPHIAEELWANLGMKYSIHNQNWPTWDEEL 747


>gi|154174900|ref|YP_001408244.1| valyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112802782|gb|EAU00126.1| valyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 873

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 131/368 (35%), Gaps = 55/368 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + + F      DK +    +      P    N   +     L+D  
Sbjct: 345 YCYRCKNVVEPYISKQW-FVKKQIADKAIEDVAAGLAKFYPPHWIN-SFNAWMRELRDWC 402

Query: 209 LSRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYL 239
           +SR+   WG +I                               DP  ++  W  +     
Sbjct: 403 ISRQ-LWWGHQIPVFYCDECAHEWADEGEPNECPKCKSKNFHQDPD-VLDTWFSSGLWPF 460

Query: 240 TTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
           +T G+ +          +G  A+F+P  L + G DIL F    + +        LP    
Sbjct: 461 STLGWGNGEELKNEKWFEGDLAEFYPNTLLITGFDILFFWVARMMFQGQNALEKLPFDDI 520

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                    +G K+SKSLGNVIDP++ IEE   D LR+ L      G+D     + +K  
Sbjct: 521 YLHALVKDEQGRKMSKSLGNVIDPLDSIEEYSADILRFTLALLAVQGRDIKLSDEKMK-- 578

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
           +  +  N + N   + + +    +D +       T     + S     ++E+REN+    
Sbjct: 579 LVRNFTNKLYN-AGKYLLLNESKFDDLD-KIEVKTPLGAYMQSRFYECVREVRENIDAYR 636

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A   +   +       D    W ++ +   +AS        + ++   LL  F+P +
Sbjct: 637 FNDAANALYKFLW------DEFCDWGIELSKASKASVAE--LGAIFKETMKLLSPFMPFI 688

Query: 470 ANKIFDIL 477
           +  ++  L
Sbjct: 689 SEYLYHEL 696



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           +K  I           HIGH+    + D++ R+ R+DG   L+  G D  G       + 
Sbjct: 37  KKFCIMMPPPNVTGSLHIGHSLTFTLQDIMTRYKRMDGYKTLWQPGLDHAGIATQNVVEK 96

Query: 64  --------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                      +  K FV +  +             R +      S   F  T ++    
Sbjct: 97  QLLAQGITKESIGRKEFVKKVWQWKEKSGGMIVHQMRRLGISPTWSRQRF--TMDEGLKK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             +  +  + +KG I +  Y   +   D A  + +  +K   G+ Y
Sbjct: 155 AVKKAFVSLYEKGLIVRENYMINWCTHDGALSDIEVEHKENKGKLY 200


>gi|117927979|ref|YP_872530.1| leucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|189082978|sp|A0LSY4|SYL_ACIC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117648442|gb|ABK52544.1| leucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 832

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 13/234 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y+     YP+   H+GHA    I DV+AR+    G +VL   G D  G     AA 
Sbjct: 48  RERRYMLDMFPYPSGDLHMGHAEAFAIGDVVARYWFQRGYNVLHPIGWDAFGLPAENAAI 107

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +    +  +N            IS+D    + T +  ++   + L+ ++ ++G  Y+
Sbjct: 108 QRNLHPADWTYRNIETQAASFRNYAISFDWSRRLHTCDPEYYKWTQWLFLRLFERGLAYR 167

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V     G         V       ++FR++ Y  +LL    
Sbjct: 168 KASPVNWCPNDQTVLANEQVV----GGTCERCGAQVTKKTLTQWYFRITEYAQRLL---- 219

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
              +  L   R  E +  ++      S      D+ I+   +P  +     D L
Sbjct: 220 --DDMALLEGRWPERVLTMQRNWIGRSEGAY-VDFTIEGRAEPVTVFTTRPDTL 270



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 103/282 (36%), Gaps = 36/282 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFW-PADLHVI 263
            +       G     D    M  ++D+   YL      D        K + W P   +V 
Sbjct: 494 WVQTTCPRCGGSAQRDTD-TMDTFVDSSWYYLRYCSPHDPSQPFDVAKVRQWLPVHQYVG 552

Query: 264 GKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y            L   +     + + G ++++G+ +SKSLGN +D  E 
Sbjct: 553 GVEHAILHLLYSRFITKVLHDMGLVDFVEPFSALLNQGQVINQGKAMSKSLGNGVDLGEQ 612

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +   GVDA+R  +V      +D  +        +N          V R         +  
Sbjct: 613 LATYGVDAVRLTMVFAGPPEEDIDW------ADMNPGALGKFLARVWRIAG------EVT 660

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
            P      + D ++  V  R ++E+ E +++   + A+A+V+ L + + +  D       
Sbjct: 661 SPVGAPPKDGDPALRRVTHRTIREVTELVESFRFNVAVARVMELANALRKAID------- 713

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             T P  A   +    E    LA++L  F P  A + +  L 
Sbjct: 714 --TGPGPADPAVREGAEA---LAVMLSLFAPYTAEECWARLG 750


>gi|213966842|ref|ZP_03394993.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301381973|ref|ZP_07230391.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058767|ref|ZP_07250308.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|213928692|gb|EEB62236.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 868

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G  VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKSVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 115/396 (29%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  +       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVILPEDVVPDGAGSPLARMPQFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++              + R   +                A T+ 
Sbjct: 655 MFASPPDMSLEWSDSGVEGSH---------RFLRRVWRLAQAHVGQGASGSLDIAALTDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKAVRRSIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  + +LL    P ++++++  L   +
Sbjct: 757 ----LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|254486586|ref|ZP_05099791.1| leucyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043455|gb|EEB84093.1| leucyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 848

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKIATGHSVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N  + RD    L +S D      T +  ++   + L+     +G +Y
Sbjct: 90  MAIGGHPKDWTYGNIADMRDQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLKEGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y + LL+  
Sbjct: 150 RKNAIVNWDPVDMTVLANEQVEAG----RGWRSGALVERRELTQWFFKISDYSEDLLNAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   ++           GL+
Sbjct: 206 DTLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 114/375 (30%), Gaps = 88/375 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----------GLKD 206
           V       +      Y    +     +   ++P ++ N  I                   
Sbjct: 419 VTKYRLRDWGLSRQRYWGCPIPVVHCNACGVVPEKKENLPIELPYDVSFDVPGNPLDRHP 478

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHV 262
                     G     +    M  ++D  + Y                 A++W   D ++
Sbjct: 479 TWRDCACPSCGAPAKRETD-TMDTFVD-SSWYFARFTSPHADTPTVMEDAEYWMNVDQYI 536

Query: 263 IGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI---LHKGE---- 301
            G +    H +Y      A  ++ +LP            + + +H         G     
Sbjct: 537 GGVEHAILHLLYSRFFARAMQITGHLPEKAIEPFNALFTQGMVTHEIYQTRDENGRPVYH 596

Query: 302 ----------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                                 K+SKS  NV+DP+ +I   G D  R+F++ +    +D 
Sbjct: 597 LPEDVTDGKLADGTAVEIIPSAKMSKSKKNVVDPLGIIASYGADTARWFVLSDSPPERDV 656

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +   G +          + N+ +R   M             A  E D+ +L    + + 
Sbjct: 657 EWTASGAEAAFKH--LGRVWNISNRITEM----------GQDASGEGDDDLLRAMHKTIH 704

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           ++   +++   + A+A++ +  +             L+K+    A+       E I  LA
Sbjct: 705 DVTMGVESFGFNAAIAKLYAFTA------------TLQKSKAGHAAQ-----REAIMTLA 747

Query: 460 ILLQAFVPKLANKIF 474
            L+    P LA +I+
Sbjct: 748 QLMAPMTPHLAEEIW 762


>gi|198463038|ref|XP_001352664.2| GA20381 [Drosophila pseudoobscura pseudoobscura]
 gi|198151087|gb|EAL30162.2| GA20381 [Drosophila pseudoobscura pseudoobscura]
          Length = 871

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ +   YP+   H+GH     I+D +ARF R+ G +V    G D  G     AA  
Sbjct: 62  DKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFQRMCGKNVFQPIGWDSFGLPAENAANQ 121

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  QN    +     L  S+D    + T   +++   + L+  +  +G  Y+ 
Sbjct: 122 RGVEPAAWTQQNIAQMKQQLQRLGCSFDWTHELSTCSPQYYRWTQHLFLMLHKRGLAYQN 181

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY-- 180
                +   D+    D++V          A+   V+    + +F R SAY  +LL     
Sbjct: 182 EALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLKQWFIRTSAYAKQLLDGLDD 238

Query: 181 ----ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
               +      L      E   +  + L       + +    +   DP 
Sbjct: 239 PTLRDWRDIINLQRHWIGECNGYAFTLLTSACNLLRVWTANPEHLKDPN 287



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 91/318 (28%), Gaps = 71/318 (22%)

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKD 266
            +    G          M  ++D+   YL      ++         ++F P DL++ GK+
Sbjct: 448 CECPKCGDPKAKRETDTMDTFVDSSWYYLRFLDAHNSERIFDPTLASQFMPVDLYIGGKE 507

Query: 267 ILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI---------------------- 296
               H  Y        N         P  + +     +                      
Sbjct: 508 HAVLHLYYARFMNHFLNNCGLSPTSEPFSRLLVQGMVMGRSYRVKGSGRYVREDEVEVVN 567

Query: 297 ---------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                          +   EK+SKS  N ++P E+ ++ G D  R  ++ ++A      +
Sbjct: 568 AKKNQALLKETKEPVVMTWEKMSKSKQNGVEPGEMFDQYGTDTTRLIILADVAPTSHRNW 627

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                   +N      +   +    +   +    +  +   F   D  +    +  ++  
Sbjct: 628 SSATFPGILNW--QKRLWLTLQEFQAAREEASTEVDVSSEQFLAEDAKLFDARNFYVKGA 685

Query: 402 RENMQ-NQLIHRALAQVISL---VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             N +    +  A++++  L   +    ++              +RA             
Sbjct: 686 TFNYRHAHQLSVAISKMQGLTNSLRRTPKHIQRH------GKQFERALAAQ--------- 730

Query: 458 LAILLQAFVPKLANKIFD 475
             I+L    P  A++++ 
Sbjct: 731 -IIMLAPMAPHFASELWS 747


>gi|227872779|ref|ZP_03991099.1| isoleucine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841378|gb|EEJ51688.1| isoleucine--tRNA ligase [Oribacterium sinus F0268]
          Length = 1082

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 105/345 (30%), Gaps = 8/345 (2%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D       +                +    R   YQ+ LL       +         E I
Sbjct: 471 DRYWGTPLNIWECKDCGEQEAIGSIKELSERADNYQEVLLKLKAEGDKGYSSDYVGYEHI 530

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              K  +  L    K    G ++   P+ ++  W D+         Y           +P
Sbjct: 531 ELHKPYVDYLKC--KCPKCGGEMNRVPE-VIDCWFDSGAMPYAQHHYPFENKELFEAQFP 587

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           A       D     F+++   + +L    P    +         G+K+SKS GN +DP+E
Sbjct: 588 AQFICEAVDQTRGWFYSLLAESTILFHKAPFENVLVLGHVQDENGQKMSKSKGNSVDPME 647

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +E+ G DA+R+F     A      +    + +     L+          +   + ++D 
Sbjct: 648 ALEKHGADAIRWFFYTNSAPWLPNRFHDQAVVEGQRKFLSTLWNTYAFFVLYANIDNFDP 707

Query: 376 MIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQK 432
                   + T  D  + S  + ++  +  N+    I  A A +     ++ + Y    +
Sbjct: 708 TKYTLDKESLTPMDRWVFSKLNSLILTVDTNLSQFKIPEAAAALQEFCEDLSNWYVRRSR 767

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                K              E +     L    VP +   I+  L
Sbjct: 768 ERFWAKGMEQDKINAYLCLYEALVTFVKLAAPLVPFITESIYQNL 812



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 59/188 (31%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE             N +PHIGH       D++ RFH + G  V    G D HG  +   
Sbjct: 36  KENASYVFYDGPPTANGKPHIGHVETRAFKDMIPRFHAMKGKMVPRKAGWDTHGLPVELE 95

Query: 62  AQNAGVT-----------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T     
Sbjct: 96  IEKEIGINGKEQIESYGVAPFIDLCKKNVWKYKGMWEDFSYKVGFWADMDNPYVTYHDDF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I  K  +YKG     Y  R     +  EV +G       +     +   E
Sbjct: 156 IESEWWALKEIWKKKLLYKGFKVVPYCPRCGTPLSSHEVAQGYKEVKERSAVVRFKIKGE 215

Query: 163 EGYFFRLS 170
           EGYF   +
Sbjct: 216 EGYFLAWT 223


>gi|126736211|ref|ZP_01751954.1| leucyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714377|gb|EBA11245.1| leucyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 847

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G ++L   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLATGHNILHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N  + +     L +S D      T + +++   + L+     KG IY
Sbjct: 90  MASGGHPKDWTYSNIADMKAQMKPLGLSIDWSREFATCDPKYYGQQQALFIDFLSKGLIY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y ++LLS  
Sbjct: 150 RKKAVVNWDPVDMTVLANEQVIDGKG----WRSGAEVERRELVQWFFKISDYSEELLSAI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   ++           GL+
Sbjct: 206 DGLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 121/400 (30%), Gaps = 93/400 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L Y  S      P++R          
Sbjct: 427 WGLSRQRYWGCPIPVVHCDDCGVVPEKKENLPVELPYDVSFDTPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y       D     +   A +W   
Sbjct: 480 -----WRDCACPSCGKPAQRETD-TMDTFVD-SSWYFARFTSPDADTPTNLEDASYWMNV 532

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI---LHKGE 301
           D ++ G +    H +Y      A  ++ +LP            + + +H        KG 
Sbjct: 533 DQYIGGIEHAILHLLYSRFFARAMQMTGHLPQGTEEPFNALFTQGMVTHEIYQTTDEKGR 592

Query: 302 --------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                     K+SKS  NV+DP +++ + G D  R+F++ +   
Sbjct: 593 PVYHLPEDVTDGKLADGTEVQIVPSAKMSKSKKNVVDPDDILAKYGADTARWFVLSDSPP 652

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +        N +  + +   +M                     +L    
Sbjct: 653 ERDVEWTASGAEATFKH--LNRVHRVATDIAAMDEDTSTDDED-----------LLRAMH 699

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + + ++   ++    + A+A++ +  +             L K+    ++       +  
Sbjct: 700 KAIHDVTMGVETFGFNAAIAKLYAFTN------------VLAKSKAGGSAK-----RQAA 742

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
           + LA L+    P L+ +I+ +L       N  +   D+ +
Sbjct: 743 KVLAQLMSPMTPHLSEEIWSMLGGEGLIANAPWPVADEAM 782


>gi|115377905|ref|ZP_01465090.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115365065|gb|EAU64115.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 865

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI   + YP+ + H+GH    +I DV AR+ ++ G DVL   G D  G     AA  
Sbjct: 68  PKKYILEMLPYPSGKMHMGHVRNYLIGDVYARYFQMKGYDVLHPMGWDAFGLPAENAAIK 127

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV   V   +N  +F++    L   YD    + T++  ++   +  + ++ ++G +Y+ 
Sbjct: 128 DGVHPAVRTQENITSFKEEIRSLGYCYDWAREVNTSQPEYYRWNQWFFIQMLERGLVYRR 187

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V  G          +PV   E   + FR++ Y   LL   ++
Sbjct: 188 FSKVNWCTGCLTVIANEQVKDGT----CERCDSPVLDKEMPEWAFRITKYSQVLLDGLDT 243

Query: 183 HPEFILPIERRNEVISFVKSG 203
             E+   I            G
Sbjct: 244 LKEWPERITSMQRNWIGRSEG 264



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 126/370 (34%), Gaps = 35/370 (9%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               +   G   Q Y     P+ + E+     R      + L       +    +  + E
Sbjct: 453 VTYRQKDWGFSRQRYWGTPIPIVYCEKCDPDRRGIPVPVEQLPVRLPEIDTQAVLTGKGE 512

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                 +   + +  R       +      ++   W      YL+        D ++A+ 
Sbjct: 513 PPLAKVASWVNTTCPRCGGPARREAETMDTFVDSCW--YFARYLSPRYAEAPFDAAEARR 570

Query: 256 W-PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKS 306
           W P D++V G +    H +Y+  +            + P+ + V         G K+SK 
Sbjct: 571 WLPVDVYVGGPEHAVMHLLYFRFWTRVMKELGLSPVDEPVKRLVTQGIVNGSDGRKMSKR 630

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+ P  ++++ G D  R +++      +D  +    ++         G    + R  
Sbjct: 631 WGNVVAPATIVKKYGADTARAYVMFAGPPERDFDWSDAQVE---------GAFRFLKRVW 681

Query: 367 SMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++ +           G F      I     + L+ + E ++    + A+A ++       
Sbjct: 682 TLAVSHESVAGTVYTGPFEGKALEIRRAAHKCLKRVGEAIERLSFNTAIAGIME------ 735

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--N 483
            Y +A +     +T  ++A+       E IR LA++L  F P +A+++ +          
Sbjct: 736 -YLNALQALGTAETPAEKAA-----MAEAIRVLAVVLTPFTPHIADEVAEAYGAKAFTVQ 789

Query: 484 RCFQSLDQRL 493
             +   D  L
Sbjct: 790 EAWPDFDPAL 799


>gi|76800878|ref|YP_325886.1| leucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556743|emb|CAI48317.1| leucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 880

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ Q H+GH     I D  AR+ R+DG DVL   G D  G     AA+    
Sbjct: 36  YVLGMYPYPSGQLHMGHVRNYTITDAYARYRRMDGDDVLHPMGWDAFGLPAENAAKERDT 95

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        RD  + +   YD    + T E  ++   + L+++  ++    +    
Sbjct: 96  NPRDWTVDCIDTMRDQMESMGFGYDWEREVTTCESDYYQWNQWLFRRFVEEDLAERRDAE 155

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V    D +       PV   E E +F +++ Y D+L+   +    
Sbjct: 156 VNWCPDCETVLADEQVE--GDDELCWRCDTPVVTRELEQWFLKITDYADELVDDIDELEG 213

Query: 186 FILPIERRNEVISFVKSG 203
           +   + +        + G
Sbjct: 214 WPDSVRQMQRNWIGRQHG 231



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 108/345 (31%), Gaps = 46/345 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G            L  + +     L      +  +    
Sbjct: 411 WGISRQRYWGTPIPVVHCEDCGPELVPEEDLPVELPEFVNTTGNPLDAADDWKETTCPAC 470

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G   +  +            D              Y++        D  +A  W P D +
Sbjct: 471 GDPAVRET------------DTMDTFVDSSWYFLRYVSPGLETAAFDRERANDWMPVDQY 518

Query: 262 VIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y             L    P  + + + G +  +GEK+SKS GNV+ P
Sbjct: 519 VGGIEHAVMHLLYSRFVTKVLADHEDLDHREPF-ENLLAQGMVQLEGEKMSKSKGNVVSP 577

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +++E G D  R F+++     +D  + ++G++              +++   ++    
Sbjct: 578 QAIVDEYGADTARLFMMQAAQPERDFDWTEEGVRSAYT---------FLTQLKELVAAYA 628

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
            G I T          I S     +    E  +  + + A+ Q  S V  + +Y      
Sbjct: 629 GGDIETAAEADAVAGYIESEREATVAVATEEYEELVFNTAVRQAQSFVGTLRQYRSHTA- 687

Query: 434 WELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDIL 477
                        V   T E  +     LL    P +  +++  L
Sbjct: 688 -------------VHGPTFERGLETALKLLAPVAPHICEELWAEL 719


>gi|257439124|ref|ZP_05614879.1| leucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198375|gb|EEU96659.1| leucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 848

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   +N  +FR+    L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKKNVDHFREQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    ++EV  G          + V    +  +  +++AY DKL+  
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNG----VCERCGSEVVHKVKSQWMLKITAYADKLIDG 204

Query: 180 YESHPEFILPIERRNEVI 197
            +          ++   I
Sbjct: 205 LDGLDYIERVATQQKNWI 222



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 73/177 (41%), Gaps = 37/177 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P EV+++ G D +R + +      +   +    +          G    
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLYEMFMGDFEQAAPWQTSAI---------AGCNRF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  ++  K  +G    P        +I ++  + ++++  +++   ++ A+AQ+++LV
Sbjct: 675 LDRVWALSDKLVEGEGYRP--------AIETLMHQTIKKVGADIEGLKMNTAIAQLMTLV 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +             L        +         +  +  LL  F P +  ++++ L 
Sbjct: 727 NA------------LYDNGGATKAE--------LETVVQLLNPFAPHMTEELWEKLG 763


>gi|302135143|ref|ZP_07261133.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 868

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E  Y  +   YP+ + H+GH     I DV++R+ R+ G  VL   G D  G     AA
Sbjct: 31  GKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKSVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 115/396 (29%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  +       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVILPEDVVPDGAGSPLARMPQFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
           +          +   G++              + R   +                A T+ 
Sbjct: 655 MFASPPDMSLEWSDSGVEGSH---------RFLRRVWRLAQAHVGQGASGSLDIAALTDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +++     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKAVRRSIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QATPQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  + +LL    P ++++++  L   +
Sbjct: 757 ----LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|291523138|emb|CBK81431.1| isoleucyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 1049

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 135/404 (33%), Gaps = 13/404 (3%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGAD----GQYYNA 152
           +      +    W+  +      +  +    + ++D+   N++ V    +    G++ N 
Sbjct: 387 SAPNFEHSYPHCWRCDTPLIYYARESWFIKMTAVKDDLIRNNNTVNWIPESIGKGRFGNW 446

Query: 153 QHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N   W      ++      ++ +    +       L     N             +++
Sbjct: 447 LENIQDWGISRNRYWGTPLNVWECECGCQHAIGSIAELKSMSDNCPDDIELHRPFIDAVT 506

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K  + G ++   P+ ++  W D+ +       Y    +    + +PAD      D    
Sbjct: 507 IKCPECGKEMHRVPE-VIDCWFDSGSMPFAQHHYPFENEKLFKEQYPADFISEAVDQTRG 565

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   + LL    P    +         G+K+SKS GN +DP+E + E G DA+R++
Sbjct: 566 WFYSLMAISTLLFNQSPFRNVIVLGHVQDENGQKMSKSKGNAVDPMEALREYGADAIRWY 625

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
                A      + K  + +  +  +           +   +  +D M      G  +  
Sbjct: 626 FYSNSAPWLPNRFHKKAVLEGRSKFMGTLYNTYAFYVLYAEIDQFDPMKYTLDYGKLSVM 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ +LS  +  ++ +  N+    I      +   V ++ + Y    +     K       
Sbjct: 686 DKWLLSKLNSTVKAVDANLAAYKIPETAKVLQEFVDDMSNWYVRRSRERFWAKGMEQDKI 745

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    +  +       +P +  +I+  + V  +    +S+
Sbjct: 746 NAYMTLYTALVTICKAAAPMIPFMTEEIYRNIVVNVDKNAPESI 789



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVLTRVIKDMIPRYKTMKGYKVPRKAGWDTHGLPVELEVEKMLGLDGKD 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCRILWKKI 113
                         K  V +    + + +D +    D      T +  + ++     K+I
Sbjct: 107 QIEAYGMEPFIQHCKDSVWKYKGMWEEFSDAVGFWADMEHPYVTYDNNYIESEWWALKQI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +YKG     Y  R     +  EV +G  
Sbjct: 167 WDKKLLYKGYKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|237756463|ref|ZP_04584999.1| leucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691377|gb|EEP60449.1| leucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 608

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 7/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E  K Y+     YP+ + H+GH     I DV+ R++R+ G + L   G D  G     A
Sbjct: 27  EEGNKYYVLEMFPYPSGKIHMGHVRNYAIGDVVNRYYRMAGKNTLHPMGWDAFGMPAENA 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  +N    R     L  SY  D  + T    ++   + ++ K+ +KG  
Sbjct: 87  AIKHGVHPAKWTYENIDYMRQQLKRLGFSYDWDREVTTCNPEYYKWNQWIFLKMFEKGIA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V +G            V   E   ++ +++ Y ++LL  
Sbjct: 147 YRKSAIVNWCPHDLTVLANEQVIEGK----CWRCGTSVVQKEIPSWYLKITDYAERLLED 202

Query: 180 YES-HPEFILPIERRNEVISFVKSG 203
            E    ++   +    E       G
Sbjct: 203 LEKLKGKWPSQVLIMQENWIGKSEG 227


>gi|299117392|emb|CBN75348.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1072

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/395 (18%), Positives = 132/395 (33%), Gaps = 72/395 (18%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + ++ M    ++ +      + +   ++    I P         ++ +  +D  +
Sbjct: 490 CSRSGDIIEPMITPQWYVKCDRMAKRAVDAVKNKELRIEPPMHEKTWYQWLDNS-RDWCI 548

Query: 210 SRKTFDWGIKIP-----------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           SR+   WG +IP                    + ++  W  +     +  G+ D      
Sbjct: 549 SRQ-LWWGHRIPAYFASVEGEKAVDQVCLSQDEDVLDTWFSSGLFPFSVFGWPDVDSEDL 607

Query: 253 AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGN 309
             F+P  L   G DIL F    +   +  L+  LP  K V+ H  +  K G K+SK+LGN
Sbjct: 608 KAFFPTTLLETGMDILFFWVARMVMMSLELTDVLPF-KTVYLHAMVRDKFGRKMSKTLGN 666

Query: 310 VIDPIEVIE-------------------------------------EVGVDALRYFLVRE 332
           VIDP+EVI                                      E G DALR+ L+  
Sbjct: 667 VIDPLEVIYGCDLDTLHKKLEVGNLPAKEMQKAKEGQKMDFPKGIPECGADALRFGLLAY 726

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI------LKDYDGMIPTPGAFTES 386
              G+D   D   +      +  N + N V  +++ +      L     +I +  +    
Sbjct: 727 TVQGRDVNLDISRVVG--YRNFCNKLWNAVRFALTYLTDASPPLDLASELIASLDSAAPR 784

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWE--LKKTNPD 442
           D  ILS  +  + E    ++      A     S       D Y +  KP      + N  
Sbjct: 785 DRWILSRLNVAVAECNRCLEEYKFGDATQVAYSFWLYDLCDYYLELIKPVVGDTSEGNKK 844

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             S         +     L+   +P +  +++  L
Sbjct: 845 ARSIAQSCLYLCLDYGLKLIHPIMPFVTEELWQRL 879



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 23/164 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M   +K  +           H+GHA    + D L R+HR+ G   L+  GTD  G     
Sbjct: 155 MPADKKFIMVIPPPNVTGSLHLGHALTAAVEDTLCRWHRMLGHATLYVPGTDHAGIATQS 214

Query: 61  AAQNAGVTTK---------------------VFVDQNSRNFRDMADVLDISYDDFIRTTE 99
             +      +                      +  + +   R +   +D S + F  T +
Sbjct: 215 VVEKKLKKDENVTRHDLGREEFVNRVWKWKDEYGGKITTQIRKLGSSVDWSREAF--TMD 272

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                     + +  + G IY+    G +S   ++  +D EV  
Sbjct: 273 ANLSRAVTEAFCRFHESGLIYRDTRLGNWSCALKSAISDIEVDY 316


>gi|170725421|ref|YP_001759447.1| valyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169810768|gb|ACA85352.1| valyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 966

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 136/430 (31%), Gaps = 102/430 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   ++     +P +  N + +     ++D  +SR+   W
Sbjct: 374 IEPLLTDQWYVSVAPMAKTAMEAVDNGDIKFVPQQYEN-MYNSWMRDIQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 432 GHRIPAWYDEAGKVYVGRDESEVRAKHKLDDSIVLRQDNDVLDTWFSSALWTFSTLGWPK 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           +    KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 DTAELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPKLAAKIEKSTRKEFSDGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM------------- 368
            DALR+ L    + G+D  +D   L         N I N  SR V M             
Sbjct: 611 TDALRFTLASMASTGRDINWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQADDAAEDS 667

Query: 369 ILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
           I +  D          + +D  I+ + +  ++   E+M+N     A   +         D
Sbjct: 668 IGEALDCGQHGGEMELSLADRWIIGLFNETVKAYDEHMENYRFDLAANTIYEFTWNQFCD 727

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVAD 481
            Y +  KP  ++     +     +  V V+ ++  L+   +P L   I+  +     V  
Sbjct: 728 WYLELTKP-VMQNGTEAQLRGTRHTLVTVLEKMQRLMHPMMPYLTETIWKRVQPLAGVEG 786

Query: 482 ENRCFQSLDQ 491
           +     S  +
Sbjct: 787 DTLMLASFPE 796



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T ++  
Sbjct: 90  VERKVAAEEGLNRHDLGRDAFIDRIWDWKNESGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            D  + ++ ++ +   IY+G     +        +D EV              P+
Sbjct: 150 SDAVQEVFVRLYEDDLIYRGKRLVNWDPTLHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|218249227|ref|YP_002375329.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321297|ref|ZP_03796825.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|259511494|sp|B7J0S6|SYI_BORBZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218164415|gb|ACK74476.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226233329|gb|EEH32080.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 1042

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICIGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNISLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|319952746|ref|YP_004164013.1| isoleucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421406|gb|ADV48515.1| Isoleucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 1134

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 99/279 (35%), Gaps = 8/279 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y           K +PAD    G D     F+ ++
Sbjct: 595 KPMKRESDLIDVWFDSGSMPYAQWHYPFENKDLIDDNKTFPADFIAEGVDQTRGWFYTLH 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     V +   +  +G+K+SK LGN  DP E + E G DA R++++    
Sbjct: 655 AIATMVFDSVAYKNVVSNGLVLDKEGKKMSKRLGNAADPFETMNEHGADATRWYMISNAN 714

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+ +                ++   + ++             E D+ +LS
Sbjct: 715 PWDNLKFDIEGIAEVKRKFFGTLYNTYSFFALYTNIDNFQYKEKEIPLNERPEIDQWVLS 774

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
               +++ + E   +    RA   +   V E   + Y    +    K        +    
Sbjct: 775 ELHTLIKTVDEAYADYEPTRATRAISEYVQENLSNWYVRLCRRRFWKGEYEKDKISAYQT 834

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               +  +A L     P   ++++  L        F+S+
Sbjct: 835 LYTCLETVAKLSAPVAPFFMDRLYKDLTNTTHKENFESV 873



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 23/151 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E           N  P I H     I D+  R+  + G  V    G D HG  I   
Sbjct: 36  EGKESYVFFEGPPSANGMPGIHHVMARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPIELG 95

Query: 62  AQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     TK                      + D  ++    +   +D+  D +I T + 
Sbjct: 96  VEKELGITKEDIGKKISVEEYNAACKKAVMRYTDVWNKMTEQVGYWVDME-DPYI-TYKS 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
           ++ +T   L K+I +KG IYKG     YS +
Sbjct: 154 KYMETVWWLLKEIYNKGLIYKGYTIQPYSPK 184


>gi|218961403|ref|YP_001741178.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730060|emb|CAO80972.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 827

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+ +   YP+   HIGH     I DV++R   ++G +V+   G D  G      
Sbjct: 28  SSKPKYYVLSMFPYPSGVLHIGHISNYSIGDVISRLKMMEGYNVMQPIGYDAFGMPAENF 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       ++  ++N    R   D +   +D    I T    ++   + L+KK+ +KG +
Sbjct: 88  AIEHNSHPRLTTEENIAAMRIQFDSMGFGFDWSREISTCRPEYYRWGQYLFKKLYEKGLV 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + +    +++V  G          N V+  E E ++F+++ Y ++LL +
Sbjct: 148 YRKKGFQNWCEQCQTVLANEQVVDGH----CWRCGNIVEQKELEQWYFKITEYAEELLDF 203

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +        I  +   I   +
Sbjct: 204 SQVIDWPERVITMQKNWIGRSE 225



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 106/288 (36%), Gaps = 36/288 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVI 263
            ++      G     +    M  ++D+   Y   T   +         A +W P D ++ 
Sbjct: 475 WINVPCPKCGTPAKRETD-TMDTFVDSSWYYARYTDPNNDREPFSKELADYWLPVDQYIG 533

Query: 264 GKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   F         ++ + P   ++ + G +   G K+SKS GNV+DP  
Sbjct: 534 GIEHACMHLLYARFFHKFMRDLGWVNCDEPFA-RLLTQGMVTKDGAKMSKSKGNVVDPQY 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I+  G D LR FL+      KD  +  DG+        A    N V R V   L+    
Sbjct: 593 IIDRFGADTLRTFLLFASPPEKDVEWSDDGIMG------AFRFLNRVWRLVESNLETIKL 646

Query: 376 MIPTPGAFTESDESILSVCSRVLQEI----RENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
            + T  +     E I ++       I     + ++    + A+A  +  ++         
Sbjct: 647 GLQTGESSEPLSEEIYNLRYETHYAIFRWREDCLERLQFNTAIASCMEFLNA----IAKI 702

Query: 432 KPWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K        PD+ ++    +       L  +L  F P +A +++ IL 
Sbjct: 703 K-------EPDKLNSAELKIYAFACVTLPKMLYPFAPHIAEELWQILG 743


>gi|78485844|ref|YP_391769.1| valyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78364130|gb|ABB42095.1| valyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 924

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 129/414 (31%), Gaps = 80/414 (19%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +  V         +  H  ++    + ++  ++      +   ++     +P    N 
Sbjct: 329 LMEKIVPHKLMVPRGDRSHAVIEPFLTDQWYVAVNELAKPAIDAVKNGDIEFVPKNWENT 388

Query: 196 VISFVKSGLKDLSLSRKTFDWG--IKIPDDP----------------------------Q 225
              ++   L+D  +SR+   WG  I    D                              
Sbjct: 389 YFEWMN-NLQDWCISRQ-IWWGHRIPAWYDEGGNVYVARSEEEVRAKYNLDTSHSLQQDD 446

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            ++  W  +     +T G+ +       KF P  + V G DI+ F    +       +  
Sbjct: 447 DVLDTWFSSALWTFSTLGWPEKTP-ELEKFHPTSVLVTGFDIIFFWVARMIMMTLKFTGE 505

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------------- 318
           +P  +          +G+K+SKS GNV+DPI++I+                         
Sbjct: 506 VPFKQVYVHGLVRDSEGQKMSKSKGNVLDPIDLIDGIDLESLVAKRTTGMMQPEKAAQIE 565

Query: 319 ------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
                         G DALR+      + G+D  +D +  +     +  N + N  +R V
Sbjct: 566 KTTRKHFGEGIESYGTDALRFTFASLASTGRDIRFDLNRCEG--YRNFCNKLWN-ATRYV 622

Query: 367 SMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
            M    KD           + +D+ I+S    V  ++ ++        A   +       
Sbjct: 623 LMNTEEKDTGTDETLDTELSLADKWIISKLQNVEMDVAKHFDQYRFDLAAHTLYEFTWNE 682

Query: 424 -VDRYFDAQKPWELKKTNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             D Y +  KP    KT  +          V V+  +  LL    P +  + + 
Sbjct: 683 YCDWYLELVKPILNSKTATEAQQRGTRQTLVRVLETILRLLHPITPYITEEAWH 736



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA++  I D L R+HR+ G + L+  GTD  G       + 
Sbjct: 33  EHYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRYHRMRGDETLWQPGTDHAGIATQMVVER 92

Query: 65  A--------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                            T K++  +       ++  R +    D S + F  T +    D
Sbjct: 93  QLAAKGLSRHDLGRDAFTQKIWEWKAESGGTITQQLRRLGASPDWSRERF--TMDDGLSD 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 AVKEVFVQLHEEGLIYRGKRLVNWDPVLHTAVSDLEVLSEEEMGSLWHMRYPL 203


>gi|56552331|ref|YP_163170.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|60390665|sp|Q5NMK1|SYL_ZYMMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56543905|gb|AAV90059.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 846

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R   YI     YP+ + H+GH     + DVLAR++R+ G +VL   G D  G     A
Sbjct: 35  SDRPHSYILEMFPYPSGRIHMGHVRNYTMGDVLARYYRMKGHEVLHPMGWDAFGMPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N    R+    +   I +   + T E  ++   + L+  +   G +
Sbjct: 95  AMERKIHPREWTMSNIATMREQLKRIGFAIDWSRELATCEPSYYGQEQALFLDLYKAGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G            V+  +   +F +++ + D LL  
Sbjct: 155 YRKESAVNWDPIDNTVLANEQVIDG----RGWRSGALVERKKLNQWFLKITEFADDLLDG 210

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            +   ++   +    E       G++
Sbjct: 211 LKDLDQWPEKVRSMQENWIGRSQGMQ 236



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 127/381 (33%), Gaps = 62/381 (16%)

Query: 141 VYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           ++  + G     +   PV   ++  +    +  +        + P+   P  R  + +  
Sbjct: 445 IHCDSCGAVPVPKDQLPVTLPDDINFDKPGNPLERHPTWKNVTCPKCGKPARRETDTLDT 504

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                  +  S     +  +  D P                            A+FW   
Sbjct: 505 F------VDSSWYFIRFASQPDDKPFDKATAEKWLPVGQYIGGVEHAILHLLYARFWTRA 558

Query: 260 LHVIGK-DILRFHAIYWPAFLL--------SANLPLPKKVF---SHGFILHKGEK----- 302
           L  IG+ DI       +   ++          +   P+++    +  F+   GEK     
Sbjct: 559 LQSIGRLDIKEPFTGLFTQGMVTHETYKDPEGHWLSPEQIHKDEAGIFLTESGEKVTVGR 618

Query: 303 ---ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
              +SKS  NV++P  ++++ G DA+R+F++ +    +D  + + G++         G  
Sbjct: 619 VEKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPERDLAWTEAGIE---------GCW 669

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +        I +  A    D+ +       ++E+ E ++    ++A+A++  
Sbjct: 670 RFMQRLWRV------AAIASEEASAGIDKDLQHRLHCSIKEVGEAIEGLSFNKAIAKIHD 723

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           LV+ +                  +AS       E    L  L+   VP L+ + + +L  
Sbjct: 724 LVNAI---------------EKAKASATRK---EAALTLFRLVAPMVPHLSEEAWHLL-- 763

Query: 480 ADENRCFQSLDQRLKPGFMLH 500
             E    ++      P   + 
Sbjct: 764 EKEGFVAEASWPEFDPALTVE 784


>gi|319779340|ref|YP_004130253.1| Leucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109364|gb|ADU92110.1| Leucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 896

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 7/236 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+ K Y  + + YP+ + H+GH     I D+L R  R+ G +VL   G D  G     A
Sbjct: 48  TEKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGWDAFGMPAENA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A  + V    +   N    +     +   I +       +  ++   + ++ K+ +KG  
Sbjct: 108 AIKSKVPPAEWTYANIDYMKKQLQAMGFAIDWSREFAACDPEYYKWNQWMFLKMLEKGIA 167

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V  G            ++  E  GY+ +++ Y  +LL Y
Sbjct: 168 YRKTQTVNWDPVDQTVLANEQVVDG----RGWRSGALIEKREIPGYYLKITDYAQELLDY 223

Query: 180 YESH-PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            ++    +   ++           GL+           G  I D   Y+     D 
Sbjct: 224 VQNGLEGWPERVKLMQINWLGKSEGLRFAFPHEIKDADGKLIQDGKLYVFTTRPDT 279



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/409 (13%), Positives = 114/409 (27%), Gaps = 95/409 (23%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-----SFVKSGLKDLSLSRK 212
           +      +      Y    +     H    +P+  ++  +              L+   +
Sbjct: 443 ETWRLRDWGISRQRYWGTPIPIIHCHHCGTVPVPYQDLPVVLPTDLIPDGSGNPLNKCDE 502

Query: 213 TFDWGIKIPDDPQY----IMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PADLHVIGK 265
                              M  ++D+   Y+             S+  +W P D ++ G 
Sbjct: 503 FMKCKCPKCGSDAKRETDTMDTFVDSSWYYMRYASHHNDQAMVDSRTDYWMPMDQYIGGI 562

Query: 266 DILRFHAIYWPAFLLSA-----------------------------------NLPLPKKV 290
           +    H +Y   +   +                                   +   P KV
Sbjct: 563 EHAVMHLLYARFWSKVSRDLGLVKFDEPFKNLLTQGMVLNHIYSRKNERGGIDYFWPDKV 622

Query: 291 ---------FSHGFILHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                          L  G+         +SKS  N +DP  +I+ +G D  R F++   
Sbjct: 623 ENVYGDKGQIVGATSLEDGQPVDYMGIGTMSKSKNNGVDPQYLIDTMGADTARLFVMFAS 682

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-----E 388
              +   +   GL         +G    + R  ++     D +IP    F  S+     +
Sbjct: 683 PPEQTLEWSNTGL---------DGSNRFLRRLWNLCYSLKDEIIPDGERFDFSNAPKDIK 733

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
                  ++L +   +      +  ++  + L++      +  K  E +   P       
Sbjct: 734 QFRLSVYQILNQADYDYGRMQYNTVVSANMKLLNL----LEDAKFEESEYKKPA------ 783

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-----NRCFQSLDQR 492
               E I  L  LL   VP +   ++  L  A       +  +  +DQ+
Sbjct: 784 --LSEAISILLRLLYPAVPHITYVLWQDLGFAKSYGEILDASWPQVDQK 830


>gi|222617646|gb|EEE53778.1| hypothetical protein OsJ_00171 [Oryza sativa Japonica Group]
          Length = 1257

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K YI     YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 406 TSKPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMQGFNVLHPMGWDAFGLPAEQ 465

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+  ++N   FR     L  SY  D  I TTE  ++   + ++ ++  +G 
Sbjct: 466 YAIETGTHPKITTERNINRFRSQLKSLGFSYDWDREISTTEPTYYKWTQWIFLQLLKRGL 525

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  R+++Y D+LL 
Sbjct: 526 AYQAEVPVNWCPALGTVLANEEVIDG----VSERGGHPVIRKPMRQWMLRITSYADRLLE 581

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 582 DLDELDWPESIKEMQRNWIGRSE 604



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 33/181 (18%)

Query: 302  KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 1023 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 1073

Query: 362  VSRSVSMILKDY--DGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
            + R+  +++     DG        T+ + ++  L V  + +  + E +Q    + A++ +
Sbjct: 1074 LGRTWRLVVGTPLPDGSYGVGTTVTDEEPTLDQLRVLHKCIARVTEEIQETRFNTAISAM 1133

Query: 418  ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  V+   ++    +P    K+              VI    +LL  F P +A +++  L
Sbjct: 1134 MEFVNAAYKW--DTQP----KS--------------VIESFILLLSPFAPHMAEELWFRL 1173

Query: 478  F 478
             
Sbjct: 1174 G 1174


>gi|221633223|ref|YP_002522448.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155678|gb|ACM04805.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 829

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 6/195 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y      YP+   HIGH +    AD  AR+ R+ G +VLF  G D  G     AA
Sbjct: 40  TRPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGYNVLFPFGFDAFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  +V+  QN  + +     L   +D    + T    ++   +  + +   +G  Y
Sbjct: 100 IKHGIHPRVWTMQNIAHMKKQLRSLGGMFDWSKEVITCLPEYYRWNQWFFLQFYKRGLAY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +     W+    +    +++V  G            V   + E +F R++AY ++LL + 
Sbjct: 160 RAKAPVWWCPTCQTVLANEQVIDG----RCERCSTEVYRRDLEQWFLRITAYAEELLRFD 215

Query: 181 ESHPEFILPIERRNE 195
                  +   +RN 
Sbjct: 216 GIDWPERVITMQRNW 230



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 114/282 (40%), Gaps = 37/282 (13%)

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------L 280
           + W   L+ +     +        A + P D +  G +    H +Y   +         +
Sbjct: 512 WYWYRYLSPHENERPFDPEKV---AYWTPVDQYTGGIEHAILHLLYSRFWTKALADLGLV 568

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P  +       +   GEK+SKS GNV+DP +++  +G D +R +L+      + G 
Sbjct: 569 NHREPFLRLFNHGVILGEDGEKMSKSRGNVVDPDDLVARLGADTVRLYLMFIGPWSQGGP 628

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +   G+          G+   + R  +++ +  D  +P   A  E   ++  +  R ++ 
Sbjct: 629 WSSRGV---------AGVQRFLQRVWALVTETLD--VPVDTAEDEQARALRRLVHRTIKH 677

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++ +    + A+A+++ LV+E+ R         L++T   R    + V  E +  L +
Sbjct: 678 VTDDFETFSFNTAIARMMELVNELSR---------LRETTVVR----MPVWREALETLVL 724

Query: 461 LLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFMLH 500
           LL    P LA +++  L    +   + + + D  L     + 
Sbjct: 725 LLAPGAPHLAEELWQRLGKPYSVHQQSWPAYDPALAAEETVE 766


>gi|84687979|ref|ZP_01015843.1| leucyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664011|gb|EAQ10511.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 848

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + HIGH     + DV+AR+ +  G  VL   G D  G     AA 
Sbjct: 31  KPKFYVLEMFPYPSGRIHIGHVRNYTMGDVVARYKKSSGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N    +     +  S D      T +  ++   + L+    +K  +Y+
Sbjct: 91  ATGGHPKDWTYNNIAEMKSQMKPMGWSLDWTREFATCDPEYYGQQQALFIDFLEKDLVYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S + ++LL   +
Sbjct: 151 KNAVVNWDPVDMTVLANEQVIDGKG----WRSGAEVERRELTQWFFKISDFSEELLEAID 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +  ++   +            GL
Sbjct: 207 TLKDWPEKVRLMQANWIGKSQGL 229



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 97/388 (25%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV    + G            L Y  S      P++R          
Sbjct: 424 WGLSRQRYWGCPIPVVHCGDCGVVPEKKENLPIELPYDVSFDVPGNPLDRHPT------- 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-PA 258
                         G     +    M  ++D  + Y                 A +W   
Sbjct: 477 -----WRDCACPSCGKPAKRETD-TMDTFVD-SSWYFARFTAPRATTPTVAEDADYWMNV 529

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLPLPKKVFSHGFIL-------------HKGE 301
           D ++ G +    H +Y      A  +  +LP   K   +                  +G 
Sbjct: 530 DQYIGGIEHAILHLLYSRFFARAMHICGHLPEKSKEPFNALFTQGMVTHAIYQTRDAEGR 589

Query: 302 -------------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                          K+SKS  NV+DP+E+I + G D  R+F++
Sbjct: 590 AVYHFPEDVEVSESGATLKATGEAVEVIPSAKMSKSKKNVVDPLEIIAQYGADTARWFVM 649

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    +D  +   G      A+ A+     V R  + I +             E DE +
Sbjct: 650 SDSPPERDVEWTASG------AEGASKHLARVYRIAAEIAEATGT--------GEGDEDL 695

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L    + ++ + + ++    + ++A++    + + +           K   +   T +  
Sbjct: 696 LREMHKTIKAVTDGIEGFAFNTSIAKLYGFTNTLSK----------SKAGAETKKTAM-- 743

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
                R +A L+    P LA +++ +L 
Sbjct: 744 -----RVMAQLMAPMTPHLAEEVWAMLG 766


>gi|241761613|ref|ZP_04759700.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373921|gb|EER63454.1| leucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 846

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R   YI     YP+ + H+GH     + DVLAR++R+ G +VL   G D  G     A
Sbjct: 35  SDRPHSYILEMFPYPSGRIHMGHVRNYTMGDVLARYYRMKGHEVLHPMGWDAFGMPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N    R+    +   I +   + T E  ++   + L+  +   G +
Sbjct: 95  AMERKIHPREWTMSNIATMREQLKRIGFAIDWSRELATCEPSYYGQEQALFLDLYKAGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G            V+  +   +F +++ + D LL  
Sbjct: 155 YRKESAVNWDPIDNTVLANEQVIDG----RGWRSGALVERKKLNQWFLKITEFADDLLDG 210

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            +   ++   +    E       G++
Sbjct: 211 LKDLDQWPEKVRSMQENWIGRSQGMQ 236



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 127/381 (33%), Gaps = 62/381 (16%)

Query: 141 VYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           ++  + G     +   PV   ++  +    +  +        + P+   P  R  + +  
Sbjct: 445 IHCDSCGAVPVPKDQLPVTLPDDINFDKPGNPLERHPTWKNVTCPKCGKPARRETDTLDT 504

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
                  +  S     +  +  D P                            A+FW   
Sbjct: 505 F------VDSSWYFIRFASQPDDKPFDKATAEKWLPVGQYIGGVEHAILHLLYARFWTRA 558

Query: 260 LHVIGK-DILRFHAIYWPAFLL--------SANLPLPKKVF---SHGFILHKGEK----- 302
           L  IG+ DI       +   ++          +   P+++    +  F+   GEK     
Sbjct: 559 LQSIGRLDIKEPFTGLFTQGMVTHETYKDPEGHWLSPEQIHKDEAGIFLTESGEKVTVGR 618

Query: 303 ---ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
              +SKS  NV++P  ++++ G DA+R+F++ +    +D  + + G++         G  
Sbjct: 619 VEKMSKSKKNVVEPAPILDQYGADAVRWFMLSDSPPERDLAWTEAGIE---------GCW 669

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             + R   +        I +  A    D+ +       ++E+ E ++    ++A+A++  
Sbjct: 670 RFMQRLWRV------AAIASEEASAGIDKDLQHRLHCSIKEVGEAIEGLSFNKAIAKIHD 723

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           LV+ +                  +AS       E    L  L+   VP L+ + + +L  
Sbjct: 724 LVNAI---------------EKAKASATRK---EAALTLFRLVAPMVPHLSEEAWHLL-- 763

Query: 480 ADENRCFQSLDQRLKPGFMLH 500
             E    ++      P   + 
Sbjct: 764 EKEGFVAEASWPEFDPALTVE 784


>gi|225849502|ref|YP_002729667.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643602|gb|ACN98652.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 607

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 7/204 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     I DV+ R++R+ G + L   G D  G     AA
Sbjct: 30  KQNKYYVLEMFPYPSGKIHMGHVRNYAIGDVINRYYRMTGKNTLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G+    +  +N    +     L  SY  D  I T    ++   + L+ K+ +KG  Y
Sbjct: 90  IKSGIHPAKWTYENIDYMKSQLKRLGFSYDWDREIATCNPDYYKWNQWLFLKMFEKGIAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V   E   ++ +++ Y +KLL   
Sbjct: 150 RKSALVNWCPHDLTVLANEQVIDGK----CWRCGTQVVQKEIPSWYLKITDYAEKLLQDL 205

Query: 181 ES-HPEFILPIERRNEVISFVKSG 203
           E    ++   +    E       G
Sbjct: 206 EKLKGKWPSQVLTMQENWIGKSIG 229


>gi|300309930|ref|YP_003774022.1| leucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072715|gb|ADJ62114.1| leucyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 882

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     A
Sbjct: 36  RDKKKFYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENA 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +   N    +     +   I +   +      ++   + ++ K+ +KG I
Sbjct: 96  AMANGVPPAQWTYSNIDYMKSQMQSMGLAIDWSREMTACRPEYYKWNQWMFLKMLEKGII 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D+    +++V  G            ++  E   Y+ +++ Y D+LL +
Sbjct: 156 YKKTGTVNWDPIDQTVLANEQVIDG----RGWRSGAVIEKREIPMYYAKITDYADELLEH 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E+         R  +     K
Sbjct: 212 VETKLPGWPERVRLMQANWIGK 233



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 117/367 (31%), Gaps = 36/367 (9%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + E +   D    G   +      +   +++   Y+ R ++           + 
Sbjct: 481 SGNPLNKHEQFLKVDCPCCGKPARRETDTMD--TFVDSSWYYMRYTSPGSNEAMVDSRND 538

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D+G+   D+P   +      L      T Y
Sbjct: 539 YWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKFDEPFTNLLTQGMVL----NETYY 594

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  + PAD+ +   D  R       A L     P+          +   EK+S
Sbjct: 595 REDAAGKKTWYNPADVDLSFDDKGRP----VSAVLKEDGQPVM---------IGGTEKMS 641

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP   I++ G D  R F +      +   +   G++   N  L        + 
Sbjct: 642 KSKNNGIDPQAQIDQYGADTARLFTMFASPPEQTLEWSGAGVEG-ANRFLRRVWAFGYNN 700

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           +  +                +S +++     +VLQ+   + +    +  ++  + +++  
Sbjct: 701 AARISAAG----AVDAAQLDDSLKTLRREVHKVLQQADNDFKRIQYNTVVSACMKMLN-- 754

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                      L+   P   +    V  E       +L    P + + ++  L  A    
Sbjct: 755 ----------TLEAAKPAAGAAGDAVIAECFSIFLRVLNPVAPHITHVLWQELGYAKAQG 804

Query: 485 CFQSLDQ 491
                D 
Sbjct: 805 DILDADW 811


>gi|323137155|ref|ZP_08072234.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397513|gb|EFY00036.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 877

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 6/202 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y+     YP+ + H+GH     + DV+AR+ R  G DVL   G D  G     AA  
Sbjct: 34  PKYYVLEMFPYPSGRLHMGHVRNYSMGDVIARYMRAKGYDVLHPMGWDAFGLPAENAAAQ 93

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G     +   N    R     L +S D    I T +  ++   + L+      G + + 
Sbjct: 94  TGAHPATWTYANIAAMRAQLKTLGLSLDWSREIATCDPEYYRHQQKLFLDFLKAGIVDRK 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     +++V  G            V+  E   +F ++++Y  +LL   ++
Sbjct: 154 KSKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFLKITSYSLELLEALDT 209

Query: 183 HPEFILPIERRNEVISFVKSGL 204
              +   +            G+
Sbjct: 210 LDRWPDKVRLMQRNWIGRSEGM 231



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 114/389 (29%), Gaps = 82/389 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G      A     L    +  +   P++R     +    
Sbjct: 436 WGVSRQRYWGCPIPIIHCETCGPVPVPDADLPVRLPEDVTFDQPGNPLDRHPTWKNV--- 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY----LTTTGYLDNPDGSKAKFWPA 258
                         G     +    M  ++D+   Y                + A++ P 
Sbjct: 493 ---------PCPSCGRPARRETD-TMDTFVDSSWYYARFTDPHNADAPAAADALARWLPV 542

Query: 259 DLHVIGKDILRFHAIY-------WPAFLLSANLPLPKKVFSHGFI---LHKG-------- 300
           D ++ G +    H +Y             +A       +F+ G +    +KG        
Sbjct: 543 DQYIGGIEHAILHLLYSRFFARAMRDSGHAAAAEPFAGLFTQGMVVHETYKGPDGWVSPA 602

Query: 301 ---------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                                      EK+SKS  N +DP +++   G D  R F++ + 
Sbjct: 603 AIRIESGEGGRRAFLLDSGAEVEIGPIEKMSKSKKNTVDPDDIVASYGADTARLFVLSDS 662

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAFTESDES 389
              +D  +  +G         A G    V R    + +            PG F      
Sbjct: 663 PPDRDVIWSDEG---------AQGAWRFVQRVWRTVGELGRVAAPAGAAAPGEFGPEALK 713

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + + ++ EN++    + A+A++    +E+    DA        T     + + Y
Sbjct: 714 LRKATHKTVAQVSENIERLRFNSAIARIREFGNELTAALDAV-------TETPVGADLAY 766

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF 478
              E       L+    P +A + +  L 
Sbjct: 767 AFREAADAFVRLVAPMTPHVAEECWTDLG 795


>gi|296242288|ref|YP_003649775.1| Isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094872|gb|ADG90823.1| Isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 1057

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/298 (21%), Positives = 111/298 (37%), Gaps = 14/298 (4%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FH 271
               G+++   P  +M VW D+   +    G+              D    G D +R + 
Sbjct: 511 CPVCGLEMHRVPD-VMDVWFDSGVCFYAAKGHPKKLSLDDIIL---DFIAEGHDQIRGWF 566

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                A +L  +L   K V  HGF+L + G ++ KSLGN +   E I + G D LR +L+
Sbjct: 567 FSLLRAGVLGFDLAPYKNVLVHGFMLDEQGREMHKSLGNYVGTDEAIAKAGRDPLRLWLL 626

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTES 386
                 +D  +    +++    DL+      V     M+L  +     T      +    
Sbjct: 627 SNTT-WEDAKFSWKSIEEVA-RDLSIAWNVFVFAKTYMVLDGFKPEQYTLEDLMDSLRLE 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D+ ILS  + ++Q+I   + N  +H A+  +   +       Y    +P    + N    
Sbjct: 685 DKWILSRTNTLIQKITHLLDNYEVHTAVRMLREFIVEDLSHWYIRLIRPRVWIEENTRDK 744

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
                V   V+ +L  +L  F P +   I+  +F          L +  KP   L   
Sbjct: 745 LAAYTVLYYVLDRLVRMLSPFTPFITEYIYQAMFKEKYKEESVHLLEWPKPEESLINP 802



 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 21/160 (13%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K        Y +   PHIG A+   + D + R+ R+ G  V    G D HG  I    +
Sbjct: 43  RKFNFIDGPPYTSGDIPHIGTAWNKSLKDAILRYKRMQGYKVYDQPGYDCHGLPIEVKVE 102

Query: 64  NA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
                                   +     N+         L +   +D+   T +  + 
Sbjct: 103 QKLGVRFKKEIEEKIGIDRFIAECRRLALDNASAMTKWFIDLGVFMDWDNLYLTLKNEYI 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    L KK  ++G + K      +  R      + E+  
Sbjct: 163 EAAWWLVKKADEQGLLDKDTRIVHWCPRCSTTLAEYEIEY 202


>gi|225551673|ref|ZP_03772617.1| isoleucyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371700|gb|EEH01126.1| isoleucyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 1042

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEINEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGIKIPDDPQY 226
              +      ++ +     +  +   ++    K  L++LS  +        I     P  
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 227 ----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKNLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   ++++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVNFEKGYKTMDISFMESVWWVFKSL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            DKG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YDKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|223889327|ref|ZP_03623914.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885248|gb|EEF56351.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 1042

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICIGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|298372880|ref|ZP_06982870.1| isoleucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275784|gb|EFI17335.1| isoleucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 512

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 104/265 (39%), Gaps = 22/265 (8%)

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
            N      + +PAD    G D     F  ++  + ++  ++     + +   +   G K+
Sbjct: 1   MNNKPDFKEVFPADFISEGVDQTRGWFFTLHAISTMIKGSVAFKNVISNGLVLDKNGNKM 60

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK LGN +DP   IE  G D LR++++   +   +  +D +G+++ V       + N  S
Sbjct: 61  SKRLGNAVDPFSTIETFGSDPLRWYMMTNSSPWDNLKFDVEGVEE-VRRKFFGTLYNTYS 119

Query: 364 RSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                +  + DG  P           E D  I+S+ + +++E+ E+ ++    RA   + 
Sbjct: 120 FFA--LYANVDGFTPAEKEIPLSERPEIDRWIVSLLNSLVKEVAEHYEHYEPTRAGRAIQ 177

Query: 419 SLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V++   + Y   + ++ W                    +  +A L+    P  A +++
Sbjct: 178 DFVNDNLSNWYVRLNRKRFW--GGEYDSDKIAAYQTLYTCLLTVAKLMAPIAPFYAERLW 235

Query: 475 DILFVADEN------RCFQSLDQRL 493
             L  + +       + F   D+ L
Sbjct: 236 LDLNGSPKKGESVHLQDFPKADEGL 260


>gi|257052712|ref|YP_003130545.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691475|gb|ACV11812.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 889

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  ARF RL G DVL   G D  G     AA+    
Sbjct: 42  YVLAMFPYTSGNLHMGHVRNYTITDAYARFERLRGEDVLHPMGWDSFGLPAENAAEERDT 101

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +      +  +    +   YD    I T +  ++   + L+K+  ++G + +    
Sbjct: 102 NPRDWTMDCIDSMTEQFKSMGFGYDWEREITTCDPDYYRWNQWLFKRFREEGLVERQASE 161

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V    + +       P+   E + +F  ++ Y ++L    +    
Sbjct: 162 LNWCPSCETVLADEQVE--GEDEVCWRCETPIDTREMDQWFLTITDYAEELFEALDELDG 219

Query: 186 FILPIERRNEVISFVKSG 203
           +   +          + G
Sbjct: 220 WPNNVREMQRNWIGKQEG 237



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 101/346 (29%), Gaps = 45/346 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   ++ GY           L  +       L      + +     
Sbjct: 424 WGISRQRYWGTPIPMIHCDDCGYVEVPDEDLPVELPEFVQTTGNPLDAAEEWKSVDCPDC 483

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G      +            D       +     +        D          P D +V
Sbjct: 484 GGPAHRETDT---------MDTFVDSSWYFLRFLSPDLDDAPFDTERADDWM--PVDQYV 532

Query: 263 IGKDILRFHAIYWPAFLLSAN---------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            G +    H +Y   F    +          P          +   G K+SKS  N + P
Sbjct: 533 GGIEHAVMHLLYARFFTKVLDDVDLLDGVREPFENLTNQGMVLGEDGNKMSKSGDNGVSP 592

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++EE G D  R F++      K+  +  +G++    +D    +  + S   +      
Sbjct: 593 ARIVEEYGADTARLFIMEAAQPEKEFAWSAEGVQSA--SDFLQSLYTVASEYAA-----G 645

Query: 374 DGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           D      G   E  D  I +  ++      E  ++   + AL  V  LVS + RY D   
Sbjct: 646 DVSTGDDGTIAEYVDREIAATAAKA----TEEYEDFRFNHALQAVRELVSLLRRYRDVTA 701

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  +PD          + +     LL    P +  +I++ L 
Sbjct: 702 ------VDPD-------TFEDGLVTATKLLAPVAPHVGEEIWEELG 734


>gi|330969449|gb|EGH69515.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 868

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMKTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  +I++ G D  R F++          +   G++             
Sbjct: 626 EKMSKSKKNGIDPQTMIDQYGADTCRLFMMFASPPDMSLEWSDSGVEGSH---------R 676

Query: 361 LVSRSVSMILKDYDGMIPT---PGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQ 416
            + R   +          T     A ++  ++I     + +++  +++ QNQ  + A+AQ
Sbjct: 677 FLRRVWRLAQAHVTQGPSTGLDVAALSDEQKAIRRAIHQAIRQASQDIGQNQKFNTAVAQ 736

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++L++ +      + P   + T  DRA     +  E +  +A+LL    P ++++++  
Sbjct: 737 VMTLMNVL-----EKAP---QDTPQDRA-----LMQEGVETVALLLAPITPHISHELWKQ 783

Query: 477 LFVAD 481
           L   +
Sbjct: 784 LGHNE 788


>gi|224532167|ref|ZP_03672799.1| isoleucyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511632|gb|EEF82038.1| isoleucyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 1042

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEINEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS---------LSRKTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS          +     W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICIGSKQELEELSGQKIEDLHKDTIDKITWPSK 506

Query: 220 IPDD---PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFTNESNFKNVFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  +      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGASLFESTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMKVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K      P        D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNPNLVKNNTLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               +   + + +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 EIESLKNTLNKEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M++RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MEQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIILRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDISFMESVWWVFKNLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|238650890|ref|YP_002916746.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511551|sp|C4K297|SYL_RICPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238624988|gb|ACR47694.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 835

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N +N +     +  SYD    I + +  ++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKKWTYSNIKNMKKQLKSMGFSYDWSREINSCDPEYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V     + +F +++ Y ++LL+ 
Sbjct: 144 YQKASFVNWDPVDNTVLANEQVVDG----RGWRSGAIVAKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 125/389 (32%), Gaps = 35/389 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G   +   +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEICGIVPVPYKDLPVTLPDDVNFDGHGNPLDHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAVRETDTFDTFFESSWYFTRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  ++  +  + EK+SKS  N+ID   + E+ G DA+R F++ +    KD  +   
Sbjct: 585 EFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQEQYGADAIRLFVLSDSPPEKDLEWSAS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N +  +     S+               +E ++ +  +    ++ + E+
Sbjct: 645 GIEG--CSRFINKLEYMFKAIDSL----------KDDVNSEVNKELNRLVHFTIKHVAED 692

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E+ K   D     + +       L  LL  
Sbjct: 693 IKHFALNRAIARMRELSNAISA--------EISKDKID-----VKIVRHGFNVLVQLLNP 739

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +   N  F + D+
Sbjct: 740 FIPHITEEIWQKLGNKERLYNLSFPAFDE 768


>gi|225677273|ref|ZP_03788256.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590693|gb|EEH11937.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 838

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+ R +G +VL   G D  G     AA
Sbjct: 25  KQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           ++  ++ + +  +N  N R     + +SY+    + T E  ++   +  +      G  Y
Sbjct: 85  RDNNISPETWTKENIDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAY 144

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  +   +F +++ + + LL   
Sbjct: 145 RKESWVNWDPVDQTVLANEQVVDGKG----WRSGAVVEKRKLSQWFLKITDFAEDLLKCL 200

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S   +   ++   E       G
Sbjct: 201 QSLKNWPEKVKTMQERWIGKSEG 223



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 126/381 (33%), Gaps = 53/381 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR-- 193
            N      G   Q Y     P+ + ++ G           +L           P+++   
Sbjct: 421 INYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVVLPIDVEFTSGGNPLDKHPT 480

Query: 194 NEVISFVKSGLKDLSLSRKTFD-----WGIKIPDDPQYIMY---VWIDALTNYLTTTGYL 245
            + +   K G +    +          W           +           +Y       
Sbjct: 481 WKFVDCPKCGKQAERETDTFDTFFESSWYFAAFCSEDKSIDKDACNRSMPVDYYIGGIEH 540

Query: 246 DNPDGSKAKFWPADLHVIGK-DILRFHAIYWPAFLLS--------ANLPLP---KKVFSH 293
                  ++F+   L   G  DI    +      ++              P   K++ + 
Sbjct: 541 AILHLLYSRFFCRALTKCGYFDIKEPFSTLITQGMVCHATYKDENGKWLFPAEAKELIAQ 600

Query: 294 GFILHKGE--KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           G  +  G+  K+SKS  N +DP  +IE+ G D  R F++ +    KD  +  +G++    
Sbjct: 601 GAKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDNGVEG--C 658

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +   N +  +V + +  +   YD    T G              ++L  + ++++N  ++
Sbjct: 659 SRYVNKLWRMVMQ-LRPVNIHYDNENVTGGLL-----EYRKKIHKLLHGLTDDLENCRLN 712

Query: 412 RAL---AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             +    ++ +L++E+D                    T   +  E I  L  +++ F+P 
Sbjct: 713 CVVAKFREMTNLIAEID------------------VKTGKSLIDEGICILIRVIEPFIPH 754

Query: 469 LANKIFDILFVADENRCFQSL 489
           LA  ++  +      +  +SL
Sbjct: 755 LAESLWQEIGGQPWPKADESL 775


>gi|15617043|ref|NP_240256.1| leucyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11134968|sp|P57519|SYL_BUCAI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|25292978|pir||F84981 leucine-tRNA ligase (EC 6.1.1.4) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039108|dbj|BAB13142.1| leucyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 859

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 8/199 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y    + YP+ + H+GH     I+DV++R+ R+ G +VL   G D  G    +AA
Sbjct: 31  KKEKYYCLPMLPYPSGKLHMGHVRNYTISDVISRYQRMLGKNVLQPMGWDAFGLPAEEAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N +  +     L  SYD    I T    ++   +  + K+ +K  +Y
Sbjct: 91  IRNNTDPFSWTQKNIKYMKKQLQSLGFSYDWSREITTCHPEYYHWEQWFFTKLYEKKLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G          N ++  +   +F ++  Y + L    
Sbjct: 151 KKNSLVNWCSYDKTVLANEQVIDG----CCWRCQNKIRIKQIPQWFIKIRNYAESLYQDL 206

Query: 181 ESHPEFILPIERRNEVISF 199
           +    +  P   +N   ++
Sbjct: 207 KKLTHW--PENVKNMQRNW 223



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 72/180 (40%), Gaps = 23/180 (12%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIG 359
           K+SKS  N I+P  +I+  G D +R F++       D  + + GLK   R    L   I 
Sbjct: 618 KMSKSKNNGIEPELIIQRYGADTIRLFIMFSAPVESDLEWKESGLKGIYRFLKKLWMLIF 677

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
           N +    +    ++D +             +     + + ++ +++  +   + A+++++
Sbjct: 678 NYIDIKNTHKKINFDFLNHQQS-------ELRYQLHKTIAKVSDDIGRRQTFNTAISEIM 730

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            LV+++ +      P    K   D+      +  E +  +  +L  F P     +++   
Sbjct: 731 KLVNQLSK-----AP---IKEEQDK-----SIMRESLICIIKMLYPFTPHFCFFVWNYFN 777


>gi|219681795|ref|YP_002468181.1| leucyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682350|ref|YP_002468734.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471498|ref|ZP_05635497.1| leucyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219622083|gb|ACL30239.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624638|gb|ACL30793.1| leucyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086175|gb|ADP66257.1| leucyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086748|gb|ADP66829.1| leucyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087336|gb|ADP67416.1| leucyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087840|gb|ADP67919.1| leucyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 859

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 8/199 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y    + YP+ + H+GH     I+DV++R+ R+ G +VL   G D  G    +AA
Sbjct: 31  KKEKYYCLPMLPYPSGKLHMGHVRNYTISDVISRYQRMLGKNVLQPMGWDAFGLPAEEAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N +  +     L  SYD    I T    ++   +  + K+ +K  +Y
Sbjct: 91  IRNNTDPFSWTQKNIKYMKKQLQSLGFSYDWSREITTCHPEYYHWEQWFFTKLYEKKLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V  G          N ++  +   +F ++  Y + L    
Sbjct: 151 KKNSLVNWCSYDKTVLANEQVIDG----CCWRCQNKIRIKQIPQWFIKIRNYAESLYQDL 206

Query: 181 ESHPEFILPIERRNEVISF 199
           +    +  P   +N   ++
Sbjct: 207 KKLTHW--PENVKNMQRNW 223



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 72/180 (40%), Gaps = 23/180 (12%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIG 359
           K+SKS  N I+P  +I+  G D +R F++       D  + + GLK   R    L   I 
Sbjct: 618 KMSKSKNNGIEPELIIQRYGADTIRLFIMFSAPVESDLEWKESGLKGIYRFLKKLWMLIF 677

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVI 418
           N +    +    ++D +             +     + + ++ +++  +   + A+++++
Sbjct: 678 NYIDIKNTHKKINFDFLNHQQS-------ELRYQLHKTIAKVSDDIGRRQTFNTAISEIM 730

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            LV+++ +      P    K   D+      +  E +  +  +L  F P     +++   
Sbjct: 731 KLVNQLSK-----AP---IKEEQDK-----SIMRESLICIIKMLYPFTPHFCFFVWNYFN 777


>gi|254460912|ref|ZP_05074328.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677501|gb|EDZ41988.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 853

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 8/267 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     A
Sbjct: 29  ESKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKMSTGHNVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K +   N  + R+    L +S D      T +  ++   + L+    D+G +
Sbjct: 89  AMAIGGHPKDWTYSNIADMREQMKPLGLSIDWSREFATCDVDYYGQQQALFLDFLDEGLV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  E   +FF++S + ++LL+ 
Sbjct: 149 YRKNAVVNWDPVDMTVLANEQVEAG----RGWRSGALVERRELTQWFFKISDHSEELLAA 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIKIPDDPQYIMYVWIDALTN 237
            +    +   ++   E       GL+    +         I++       +        +
Sbjct: 205 LDGLDNWPAKVKLMQENWIGKSRGLQFAFSTIDAPDGHDRIEVYTTRPDTLNGASFVGIS 264

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIG 264
                      D ++   +  D    G
Sbjct: 265 PDHPLAKQLEKDNAEMLAFNEDCRKGG 291



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 116/389 (29%), Gaps = 96/389 (24%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV    + G            L Y  +      P++R     +    
Sbjct: 427 WGLSRQRYWGCPIPVVHCSDCGVVPEKKENLPIELPYDVTFDTPGNPLDRHPTWRNC--- 483

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y       +     D + A++W   
Sbjct: 484 ---------SCPKCGSPAQRETD-TMDTFVD-SSWYFARFTSPNAETPVDMADAEYWMNV 532

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKGE--- 301
           D ++ G +    H +Y      A  ++ NLP            + + +H      G+   
Sbjct: 533 DQYIGGIEHAILHLLYSRFFARAMKITGNLPAKAIEPFDALFTQGMVTHAIYKRDGQNGR 592

Query: 302 -------------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                          K+SKS  NV+DP+ +I   G D  R+F++
Sbjct: 593 PIYYYPEQVDLKDGKAFLKEDGSEVDIIPSAKMSKSKNNVVDPLNIISAFGADTARWFVL 652

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    +D  +   G +              + R  S+  K          A    DE +
Sbjct: 653 SDSPPERDVEWTASGAEAS---------FKHLGRVWSLCDK---ISTMDKDAKGAGDEDL 700

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L    + ++++   +++   + A+A++    +             L K+           
Sbjct: 701 LREMHKAIRDVTLGVESFGFNAAIAKLYGFTA------------TLSKS-----KASHSA 743

Query: 451 TVEVIRQLAILLQAFVPKLANKIF-DILF 478
             + I  LA L+    P LA  I+   L 
Sbjct: 744 QKQAIMTLAQLMAPMTPHLAEDIWAHQLG 772


>gi|221217622|ref|ZP_03589091.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192568|gb|EEE18786.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|297624535|ref|YP_003705969.1| isoleucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165715|gb|ADI15426.1| isoleucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 1106

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 85/421 (20%), Positives = 144/421 (34%), Gaps = 42/421 (9%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +  Y    +L+D+   N+D++    D          ++      +      Y    L
Sbjct: 433 YAKRSWYLRTTALKDKLLANNDKINWVPDSIRTGRFGKWLE--NNVDWALSRERYWGAPL 490

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-----TFDWGIKIPDDPQYIMYVWI 232
             +E+     + +    E+ +     L  L L R      TF+   K      Y + VW 
Sbjct: 491 PIWEAEDGERVCVGSVAELEALTGRDLSGLELHRPFIDEVTFERDGKTFRRVPYTVDVWF 550

Query: 233 DALTNYLTTTGYLDNPDGSKAK-----FWPADLHVIGKDILRFHAIYWPA---------- 277
           ++        GYL    G  A+      +PAD      D  R       A          
Sbjct: 551 ESGAMPYAQWGYLGERSGEAARETLRRHFPADYICEAVDQTRGWFYSLHALATLLTDGGD 610

Query: 278 --------FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                     L  ++P  K V   G IL + GEK+SKS GN++DP  V++ VG DALR++
Sbjct: 611 GVREPGALAWLGPDMPAFKNVIVLGHILDENGEKMSKSKGNIVDPWTVLDAVGADALRWY 670

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTP-GAFTES 386
           L           +    L +    DL N + N  S  V    L   +     P     E 
Sbjct: 671 LYASSPPEASKRFSL-ALVEETQRDLFNTLWNTYSFFVLYANLDRPELTRALPVAERPEL 729

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D  +++    +++++  +++      A   V   V     + Y    +    K +     
Sbjct: 730 DRWLVAKVHALVRDVTAHLEAYDPTSAARAVRDFVVDDLSNWYVRRSRRRFWKSSGDADK 789

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                   E +   A L+    P ++  I+  L +A +    +S+     P      TFD
Sbjct: 790 RAAYATLYEALVTTAKLMAPMAPFVSEAIYQNLVLALDPGAPESVHLAAWP------TFD 843

Query: 505 P 505
           P
Sbjct: 844 P 844



 Score = 53.6 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV- 71
               N +P + H       D+  RF  + G  V    G D HG  +  A +     T+  
Sbjct: 46  PPTANGKPGVHHVISRCYKDLFPRFKTMQGFRVGRKGGWDTHGLPVEIAIEKRLGFTRKS 105

Query: 72  ----------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKI 113
                           +V +N  ++  M + +    D      T +  +  +C  + K +
Sbjct: 106 QIEDFGIERFNALCRAYVFENIADWNAMTERIGYWLDLENAYVTYDNAYIASCWWVLKSL 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+G + +   + W+  R     +  EV +G  
Sbjct: 166 WDRGLLVEDYRTTWHCPRSNTSLSSHEVSQGYK 198


>gi|216264640|ref|ZP_03436632.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215981113|gb|EEC21920.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|328858308|gb|EGG07421.1| hypothetical protein MELLADRAFT_48133 [Melampsora larici-populina
           98AG31]
          Length = 971

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 65/413 (15%), Positives = 131/413 (31%), Gaps = 50/413 (12%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME----EEGYFFR 168
            +  GD  +      + +  +    +              +    +W         +   
Sbjct: 373 CAKSGDFIEPLIKPQWWVNCKDLAQEAIKRAQDGELKLFPKATEREWYSWLEGMRDWCIS 432

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
              +       Y  + E     E         ++  +    +++ F     +    + ++
Sbjct: 433 RQLWWGHRCPVYFVNIEGKQQDETDGSYWVAGRTQEEAEEKAKRMFPNDKFVLRQDEDVL 492

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPL 286
             W  +     +  G+ D       KF+PA L   G DI+ F           L+  +P 
Sbjct: 493 DTWFSSGLWPFSIMGWPDKTP-DFEKFYPASLLETGWDIIFFWVAKMTILGVKLTGKMPF 551

Query: 287 PKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF----- 340
             +VF H  I    G K+SKS GNVIDPI+VI+ + +D+L   L       K+       
Sbjct: 552 -NEVFCHAMIRDAHGRKMSKSKGNVIDPIDVIDGISLDSLHGKLQSGNLDAKELKTALAG 610

Query: 341 --------------------------------YDKDGLKKRVNADLANGIGNLVSRSVSM 368
                                            + D L+        N + N    ++  
Sbjct: 611 QKADFGKTNGIPQCGADALRFALCAYTSSGRSINLDVLRVEGYRKFCNKLWNATKFALLK 670

Query: 369 ILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424
           + +++     +     ES  +  IL   +   Q + + +++++   A + V         
Sbjct: 671 LDENFVPRTTSEPTKQESLVERWILHRLNECSQTVNKALEDRVFMAATSAVYEFWLYDLC 730

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D Y +A KP       P  + +        + +   LL  F+P +  +++  L
Sbjct: 731 DVYIEAMKPMTGPDATPATSLSAQNTLYTCLDEGLKLLHPFMPFVTEELWQRL 783



 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 23/158 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 44  FVVPAPPPNVTGSLHIGHALTIAIQDTLVRWNRMLGKTVLFNPGFDHAGISTQSVVEKRL 103

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKRHHDT 105
                                 + ++      +  + L  SYD     F  T + +    
Sbjct: 104 FKSTGQTRHDLGREKFLERVFSWKEEYQSCITNQLNRLGASYDWSRARF--TMDPQLSKA 161

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++ D+G IY+      + +R     +++EV +
Sbjct: 162 VVEAFVRLHDEGVIYRSNRLVNWCVRLNTALSNEEVDQ 199


>gi|218288777|ref|ZP_03493040.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241135|gb|EED08311.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 1046

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 65/453 (14%), Positives = 126/453 (27%), Gaps = 40/453 (8%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           ++D   RF + + L+V              K           +       +  +      
Sbjct: 359 VSDYEGRFVKDEDLNVDLVKDLASRSLVYEKHKHEHSY-PHCWRCDTPLIYYAIHSW--- 414

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
               FIRTTE           +++                 R   +  ++ +        
Sbjct: 415 ----FIRTTE---------FKEQLIANSQSVNWIPPHIRDGRMGNFL-ENVIDWNLSRSR 460

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           Y     P+                   +    S  E      R  + +            
Sbjct: 461 YWGTPLPI-----------WRCDACGEIECIGSRAELQAKAGRLPKELHKPYIDELVWPC 509

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G         ++ VW D+ +       Y         + +PAD      D   
Sbjct: 510 R-----CGRGTMARVPEVIDVWFDSGSMPFAQLHYPFENRELFERLYPADFVCEAIDQTR 564

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+++   +  ++   P    +     +   G+K+SKS GNVIDP E  ++ G DA+R+
Sbjct: 565 GWFYSLLAISTAVTGKAPYKNVLVLGHVLDEHGKKMSKSKGNVIDPFEAFDKHGADAVRF 624

Query: 328 FLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFT 384
           + V          +    +   K    DL   I    +    +   + Y           
Sbjct: 625 YFVSNTQPWNSQLFYHRAVAEAKAKYIDLLQNIHQFYALYAGIDGFNPYKVEHVPVAERP 684

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD-RYFDAQKPWELKKTNPDR 443
             D  +++   + +Q + E        +A   + + V E+   Y    +           
Sbjct: 685 LMDRWLIARLHQTIQGVDEAYHRYDATQAARLLQAFVDELSTWYVRRNRDRFWADGMEKD 744

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                    E ++ +A+L     P LA  I+  
Sbjct: 745 KVAAYLTLFEALKTVALLTAPITPFLAEDIYQN 777



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  PH GH    +  D+  R+  + G  V+   G D HG  +   
Sbjct: 39  EGRPEWVFYEGPPTANGLPHPGHVLTRVFKDLYPRYRTMKGYHVMRKAGWDTHGLPVEIE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +    +R++ + L   I  D    T    +
Sbjct: 99  IEKKFGMSGKKDIQTFGIERFVQACRESVFKYEEVWRELTERLGYWIDLDHPYMTLTDDY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   L K I DKG + +G     Y    E   +  EV +G  
Sbjct: 159 IESVWHLLKTIYDKGWLVEGHRVSPYCPHCETTLSSHEVAQGYK 202


>gi|150014938|ref|YP_001307192.1| isoleucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901403|gb|ABR32236.1| isoleucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 1037

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 140/412 (33%), Gaps = 18/412 (4%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCY-SGWYSLRDEAYYNDDEVYKGAD----GQYYNA 152
           T ++H  +    W+  +      K  +      +RD+   N++++    D    G+    
Sbjct: 379 TAQKHTHSYPHCWRCDTPLLYYPKDSWFVAMTKMRDKLLENNNKINWYPDNTRTGRMGKF 438

Query: 153 QHNPVQWMEEEG--YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             N + W       +   L  +Q +            L  +   +             + 
Sbjct: 439 LENVIDWGISRDRYWGTPLPIWQCECDHQECIGSREELEEKATTDCKGIELHKPYVDGIK 498

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G ++    + ++  W D+ +       Y      +  K +PA       D    
Sbjct: 499 LKCPHCGKEMKRTHE-VIDCWFDSGSMPFAQWHYPFENKETFEKNFPAQFISEAVDQTRG 557

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +   +  L         +     +  KG K+SK  GNV+DP EV+   G DA R+ 
Sbjct: 558 WFYTLLAISTCLFDTNSFENCIVLGHVLDKKGLKMSKHKGNVVDPFEVLNSQGADATRWH 617

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-LKDYD-GMIPTPGAFTES 386
                A      +  D + +         + N+ S  V    +  +D        +    
Sbjct: 618 FYTASAPWLPTRFSIDDVAEAQ-RKFLGTLWNVYSFYVLYAEIDKFDSTKYSDFVSDNIM 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDR 443
           D+ I+S  + +++ + + +    I +A   +     E+ + Y   +  + W  + TN   
Sbjct: 677 DKWIISKLNTLIETVDDGLNTYKITQAALAIEDFTDELSNWYVRRNRSRYWSQELTNDKI 736

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            + V     +V+  L  +   FVP +  +I+  L V  +    +S+     P
Sbjct: 737 GAYV--TLYKVLTNLVKVASPFVPFMTEEIYQNLVVNLDKNAPESIHLCTWP 786



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PH+GH    ++ D++ R+  + G  VL   G D HG  +    +         
Sbjct: 47  PPTANGKPHVGHILTRVMKDIIPRYKVMKGYKVLRKAGWDTHGLPVELEIEKKLGISGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V      +++M++ +      DD   T    + ++     K++
Sbjct: 107 QIEDFGVEKFVHECKDSVFSYVSLWKEMSEQIGFWVDMDDPYVTYHDNYIESEWWALKQM 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG +YKG     Y  R     +  EV +G  
Sbjct: 167 WNKGLLYKGHKVMPYCPRCGTALSSHEVAQGYK 199


>gi|91974916|ref|YP_567575.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123722195|sp|Q13E15|SYL_RHOPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91681372|gb|ABE37674.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 878

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 71/203 (34%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGHNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G   +
Sbjct: 93  ERKVAPKAWTYANIAAMKKQLQTMGLSLDWAREFATCDPTYYKHQQKMFLDFLKAGLAER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y  +LL   E
Sbjct: 153 ETRKLNWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITRYAQELLDALE 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +   +   +            GL
Sbjct: 209 TLDRWPDKVRLMQRNWIGRSEGL 231



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 71/181 (39%), Gaps = 10/181 (5%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G+K    +     +  
Sbjct: 629 EKMSKSKRNTVDPDDIIGSYGADTARWFMLSDSPPDRDVIWSEEGVKGA--SRFVQRLWR 686

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +++ +  +           P AF     ++       L ++   ++    + +LA +   
Sbjct: 687 MINDAAEIAKA---APAARPDAFGPEALAVRKAAHGALDKVLSGIERLAFNVSLAHIREF 743

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +       +P      +PD A  + +   E    L  L    +P LA + +  L   
Sbjct: 744 SNSLGE--ALARP---GAASPDVAPDLAWAIREGAVILVQLFHPMMPHLAEECWAALGQP 798

Query: 481 D 481
            
Sbjct: 799 G 799


>gi|51598989|ref|YP_073177.1| valyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81825616|sp|Q660D6|SYV_BORGA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51573560|gb|AAU07585.1| valyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 875

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 156/414 (37%), Gaps = 48/414 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           I T + + ++   + ++ +S K   +K          ++ +    + ++   G  Y +  
Sbjct: 295 ILTQDGKLNENVPLQYQGLSIKDARFKIEIELM----EKGFLKGVKKHRQQVGHCYRSG- 349

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++      +F  +    +K L   ES      P +  N    +  S +KD  +SR+  
Sbjct: 350 EVIEPYLSTQWFVSMKPLAEKALKALESGELRFYPKKWENT-YKYWLSNIKDWCISRQLV 408

Query: 215 DWGIKIP-----------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
            WG +IP                              DP  ++  W  +     ++ G+ 
Sbjct: 409 -WGHRIPAWYNIDTSELIISDTDPSLDEKNVGKRFVQDPD-VLDTWFSSWLWPFSSLGWP 466

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           +        ++P    +   DI+ F    +       +   P      +      +G+K+
Sbjct: 467 NITV-DFENYYPTKTLITAYDIIFFWVARMVMAGLEFTGQTPFRDVYITPLLRDKQGKKM 525

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKSLGN IDP+++I E G D+LR+ L      G+D   D       + A  AN + N  S
Sbjct: 526 SKSLGNGIDPLDIIHEYGSDSLRFTLSFLSVQGQDLNIDAKDFM--LGAKFANKVFN-AS 582

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           + + + L++ +        F + D+ +L+  +  +  +  +  N   + A   V      
Sbjct: 583 KFILLNLENREIF--NNLKFNDIDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWN 640

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              D Y +  K  +L   N D  +  +   +  +++  ++L  F+P +  KI+ 
Sbjct: 641 DFCDWYIEISK-IDLNSENVDIQNMAISKLLFFLKKALLILHPFIPFVTEKIYS 693



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 22/159 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           EK  +           H+GHA   ++ D+L R+ R+   + L+  GTD  G       + 
Sbjct: 36  EKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQTVFER 95

Query: 64  --------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                         + FV +  +             + +    D S + F  T ++    
Sbjct: 96  NLKNIGKSKNDFEREEFVKEIFKLKDKHRGVIVNQIKKLGASYDHSRERF--TLDESLCK 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++K +  KG IY+G Y         +  +D+E+  
Sbjct: 154 AVNKVFKDLYSKGLIYRGEYLVNLDPGSGSVVSDEEIEY 192


>gi|322378713|ref|ZP_08053144.1| valyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380661|ref|ZP_08054813.1| valyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146983|gb|EFX41731.1| valyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148856|gb|EFX43325.1| valyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 877

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 133/389 (34%), Gaps = 53/389 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +    E +    G+ Y   ++ ++    + +F +    QD  +   +       P 
Sbjct: 329 QEGGFIEKIEDHTHQVGKCYR-CNSSIEPYISKQWFVKKEVAQD-SIRKIKQGLAHFFPS 386

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP----------------------------D 222
             RN   +     L+D  +SR+   WG +IP                             
Sbjct: 387 HWRNN-YNAWMEQLRDWCISRQ-LWWGHRIPIFTCANHHQFVSLDTPKTCPKCANTHLEQ 444

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD---------NPDGSKAKFWPADLHVIGKDILRFH-- 271
           DP  ++  W  +     +T G+                   F+P  + + G DIL F   
Sbjct: 445 DPD-VLDTWFSSGLWPFSTLGWAQENLGLEGVLFDPHDLKDFYPNSVLITGFDILFFWVA 503

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +          LP             KGEK+SKS GNVIDP+E+I   G D+LR+ L  
Sbjct: 504 RMLLAGESFLGELPFKHIYLHALVRDEKGEKMSKSKGNVIDPLEIINTEGSDSLRFALAM 563

Query: 332 EIACGKDGFYDKDGL-KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
               G+D   +K+ + + R            +S+  S+I    +  +      +      
Sbjct: 564 LCVQGRDLRLNKEVITQARHFTHKLYHASLFLSK--SLIEAGGNLQVNLIECKSTLGRYA 621

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVL 448
            S  +   +E+R  ++    + A   +         D   +  K       N   A  V 
Sbjct: 622 KSRLNATTKEVRLALELYRFNDAATILYRFFWGEFCDWVVEFSK----ASKNTQEAPQVF 677

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + + ++  +LL  F+P ++   +  L
Sbjct: 678 SELISIFKEALLLLHPFMPFISEYFYHHL 706



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    +         + HIGHA    + D+LARF R+DG  VL+  G D  G      
Sbjct: 37  TNKPPFALMMPPPNITGRLHIGHALTFSLQDILARFKRMDGYRVLYQPGLDHAGIATQNV 96

Query: 62  AQN-------------------AGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                      +  K     Q     + +      S   F  T +  
Sbjct: 97  VEKQLLEQGIKKEEIGREAFIQKVLEWKEACGGQIVEQMQQLGISCAWSRLRF--TMDIG 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
                +  +K   D+G I +G Y   +  +D A  + +  Y    G+ Y+ ++
Sbjct: 155 LERAVKQAFKTWFDQGLIVQGTYMINWCCKDGALADIEVEYAEEQGKLYHLRY 207


>gi|164429584|ref|XP_964329.2| valyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|157073538|gb|EAA35093.2| valyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 1050

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 130/415 (31%), Gaps = 93/415 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                + ++ M  E ++ R+    +  L   E     I P     +      + ++D  +
Sbjct: 453 CEKSKDVIEPMMTEQWWVRMKEMGEAALQVVEEGKVKISPESAT-KSYKRWLADIQDWCI 511

Query: 210 SRKTFDWGIKIP---------------------------------------------DDP 224
           SR+   WG +IP                                              DP
Sbjct: 512 SRQ-LWWGHRIPAYRVIFEGEEGQRENEKSEWVVGRTQEEAQAKAEAKFAGRKFTLEQDP 570

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
              +  W  +    +   G+ +  +    KF+P  +   G DIL F    +   +  ++ 
Sbjct: 571 D-CLDTWFSSGLWPMAILGWPNTENLDFKKFFPTSMLETGWDILFFWVSRMIMLSLKMTG 629

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------- 317
            +P  +          +G K+SKSLGNVIDP+++I                         
Sbjct: 630 EVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIIRGIELEDLHAKLLVGNLKEEEVARA 689

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DA+R+ L+     G D  +D             N I       
Sbjct: 690 TKYQKTAFPGGIPECGADAMRFTLLSYTTGGGDINFDIR--VMHAYRRFCNKIWQASKYV 747

Query: 366 VSMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           +  + +D+        A F+  ++ IL   +  ++ + E ++ +   RA         + 
Sbjct: 748 LGKLPQDFMPKGELDTANFSVPEKWILHRMNVAVKGMNEALEAREFSRATKVAYQFFYDE 807

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D + +  K   L    P+   +V       +     LL   +P +  +++  L
Sbjct: 808 LCDVFIENSK-GILSDGTPEEQQSVQQTLYHALDVALRLLHPIMPYITEELWQRL 861



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I           H GHA    + D L R++R+ G + L+  G D  G       +  
Sbjct: 128 KFVIPLPPPNVTGALHCGHALANSLQDTLIRWYRMKGYETLWVPGCDHAGISTQSVVEKM 187

Query: 66  GVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +  +   +   ++  S D      T +K      
Sbjct: 188 LWKKEKKIRQELGREKFTDLVWEWKGEYHQRINNAQKLMGGSMDWSREAFTMDKNLTAAT 247

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              + ++ D+G IY+      +   
Sbjct: 248 METFCRLHDEGLIYRSNRLVNWCTH 272


>gi|297180926|gb|ADI17130.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_03O15]
 gi|297181498|gb|ADI17685.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_23I23]
          Length = 793

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 9/199 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y  + + YP+   H+GH     I D ++R+ RL G +VL   G D  G     AA
Sbjct: 31  KKPKYYCLSMLPYPSGNLHMGHVRNYAIGDAVSRYKRLKGFNVLQPMGWDAFGLPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +   +  K + ++N  N R+    L  SYD    + T++  ++   + L+ K  ++G  Y
Sbjct: 91  KGKNIHPKDWTEKNIENMREQLKSLGFSYDWSKELNTSDVSYYKFEQELFLKFYERGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V  G            V+  E + +F +++ Y D+L    
Sbjct: 151 RKKSLVNWDPVDETVLANEQVIDGKG----WRTGAEVELKEIDTWFLKITDYADELEESL 206

Query: 181 ESHPEFILPIERRNEVISF 199
                   P    N   ++
Sbjct: 207 ---ATIDWPENVINMQKNW 222



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 35/255 (13%)

Query: 232 IDALTNYLTTTG---YLDNPDGSKAKFW-PADLHVIGKDILRFHAIY-------WPAFLL 280
               + Y                  K+W P DL++ G +    H +Y            +
Sbjct: 476 FMESSWYFARYTSATNDKEIFDENTKYWLPVDLYIGGVEHAILHLLYSRFFFKALRDMDI 535

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                  KK+ + G +L  G K+SKS GN +DP E I + G D++R F++      +   
Sbjct: 536 VEGDEPFKKLLTQGMVLKDGAKMSKSKGNTVDPKEYITKYGADSIRTFMIFASPPEQSLE 595

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  +GL+          + NL +    +  K +           +S   +   C ++ ++
Sbjct: 596 WSDNGLEG--CHKFLKRLWNLSTNISELDEKQF----------KDSKNQLTDECKKLFKK 643

Query: 401 IRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           I ++ + +  ++  ++  + +++ ++  FD  K     K +           + V   L 
Sbjct: 644 INDDYEKRLNLNTIVSSCMEILNNINGRFDD-KNVNCSKED----------LLNVYDFLL 692

Query: 460 ILLQAFVPKLANKIF 474
           + L    P +   ++
Sbjct: 693 LALHPIAPHICETLY 707


>gi|302909101|ref|XP_003049999.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730936|gb|EEU44286.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 950

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 88/220 (40%), Gaps = 5/220 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+   H+GH     IADV+ARF  + G  V+   G D  G     AA 
Sbjct: 69  KDKHYVLPMFPYPSGTLHLGHLRVYTIADVVARFRTMKGDKVMLPMGWDAFGLPAENAAL 128

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N    ++  +V++    +D  + T + + +   + L+  +  +G  Y+
Sbjct: 129 ERGIAPGTWTTSNMAKMKEQLEVMNGSWDWDRELATCDPKFYKHTQKLFLMLYGRGLAYQ 188

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V          A+   V+  + + +FFR+S +++ LL   +
Sbjct: 189 AEAEVNWDPVDKTVLANEQVDANGCSWRSGAK---VEKRKLKQWFFRISEFREALLEELD 245

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +  +     ER               S+     D G  I 
Sbjct: 246 ALAKENAWPERVLAQQKNWLGKSMGASVKFPVLDLGYDIH 285



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/412 (13%), Positives = 119/412 (28%), Gaps = 95/412 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESH-------PEFILPIERRNEVISFVKSGLKDL 207
            PV+      +      Y    +             P+  LP+E      +  +SG   L
Sbjct: 463 KPVEKWRLRDWLISRQRYWGTPIPIVHCDSCGPVAVPDEQLPVELPEVDWASFRSG-NPL 521

Query: 208 SLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPADL 260
             + +  +      D P       M  ++D+   Y   T   +          K  P D 
Sbjct: 522 EATPEFVNTTCPKCDGPGRRDTDTMDTFVDSSWYYARFTDPHNEEQLLSPEAGKTLPVDT 581

Query: 261 HVIGKDILRFHAIYWPAFLL----------------SANLPL------------------ 286
           ++ G +    H +Y                          P                   
Sbjct: 582 YIGGIEHAILHLLYARFIYKFLASTPLLPQYSEETSHTAEPFKRLITQGMVHGKTYIDPA 641

Query: 287 -----------------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                            PK V S        EK+SKS  N +DP+  I + G DA R  +
Sbjct: 642 NGRFLKPDEVDLSDPAQPKVVSSGQLANISYEKMSKSKHNGVDPVGFISQYGADATRAHM 701

Query: 330 VREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--- 384
           + +   G    +D+  +    R    L + + ++ +  VS  +   + +    G      
Sbjct: 702 LFQAPVGDVLNWDEAKISGVTRWLQRLHDQVVSIAAEPVSNTMSPQEYLADKHGRLGSLS 761

Query: 385 -------ESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                  +++ +I     R +  +  + +    ++  ++ ++ L    ++  +       
Sbjct: 762 AKELAQWDAEAAIWREVQRTIASVTASYEEIYSLNTIVSDLMIL---TNKLVENS----- 813

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                   +    +  E  R +  ++    P  A + +  L  +     F+S
Sbjct: 814 --------TASPVIRREAARTIISMMAPITPAFAEECWATLHPSVTTSMFRS 857


>gi|284161481|ref|YP_003400104.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011478|gb|ADB57431.1| isoleucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 1041

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 81/422 (19%), Positives = 139/422 (32%), Gaps = 71/422 (16%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E        +      P+ +   E +F  +S  +DK+L   +    + +P          
Sbjct: 380 EETIVHRYGHCWRCKTPIIYRATEQWFLAVSKLKDKMLEEIDK--VWWIPEWAGKSRFKD 437

Query: 200 VKSGLKDLSLSRKTFDWGIKI--------------------------------------- 220
             S  KD  +SR+   WGI I                                       
Sbjct: 438 WVSNAKDWCISRQR-YWGIPIPIWICEKCGKWKVVGSINEVPWKDDLDLHRPKIDEVVFE 496

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDIL--RFH 271
                     + +  VW D+      T GY     D    K WPAD    G D     F+
Sbjct: 497 CECGGKMYRVKDVFDVWFDSGVASWGTLGYPLKISDEEFFKIWPADFITEGHDQTRGWFY 556

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    + +     P    +     +  +G K+SKSLGNV++P EVI EVGVD  R +++ 
Sbjct: 557 SQLGASVISFGRAPYKTVLMHGFTLDEQGRKMSKSLGNVVEPEEVINEVGVDTFRLYVLS 616

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT------------ 379
             A  +D  +  + +  R    + N   N +  + + +  D + + P             
Sbjct: 617 S-ALWEDLRFSWNEV--RNVLRMLNIYWNAIRFAYTYMSLDREMITPDKIQQIFGCDFDS 673

Query: 380 --PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWE 435
                    +  ILS    + +   + M+N  +HR +   +  V       Y    +P  
Sbjct: 674 ALKKIEDYENRWILSRLESLNKVAWDAMENYQLHRVVRAFLDFVVEDFSRWYIQLIRPRV 733

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             +             + VI +   ++  F P LA  I+   F+ +   C +S+     P
Sbjct: 734 WVEGEDKLKIATYLTLLRVIEKSIKIIAPFAPFLAEFIYQR-FLKEFRDCEESIFMESYP 792

Query: 496 GF 497
             
Sbjct: 793 KH 794



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 19/174 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
            +      Y   + H+G A+  +I D + R+ R+ G  V  T G D HG  I    +   
Sbjct: 36  FFFVDGPPYTTGRIHLGTAWNKVIKDTILRYKRMMGYKVTDTPGWDMHGLPIEVKVEQML 95

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                                 +  QN     +    L +   +++   T +  + ++  
Sbjct: 96  GFKTKRDIENYGIDKFIAKCMEYALQNKDAMTEQFKALGVWMDWENPYMTIKAEYINSAW 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              K+  ++G + K      +  R E    D EV              P++  E
Sbjct: 156 WTIKRAYEQGLLEKKLRVVNWCPRCETALADAEVEYADKEDPSIYVKFPIKGRE 209


>gi|203288260|ref|YP_002223275.1| isoleucyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|259511497|sp|B5RQH0|SYI_BORRA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|201085480|gb|ACH95054.1| isoleucyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 1044

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 129/401 (32%), Gaps = 24/401 (5%)

Query: 95  IRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            RT     +      +    K         +        L+   +    E  +       
Sbjct: 396 YRTNSPLIYRPISSWFVNIEKIKEKLIRSNEQINWIPEHLKKGRFGKWLENARDWAISRN 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
               NP+   +      ++     + L          L  ++ +++    K G   +  S
Sbjct: 456 RFWGNPIPIWKCSKTGNKICIGSREELEKLSGQKIIDLHKDKIDKITWPSKYGGTYVRTS 515

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                           ++  W ++ +    +  Y           +PAD    G D    
Sbjct: 516 ---------------EVLDCWFESGSMPYASKHYPFKDKDKFQNIFPADFIAEGLDQTRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +      L         + +   +   G+K+SKSL N  DPI++I   G DALR +
Sbjct: 561 WFYTLTILGTALFEKTAFKNVIVNGLVLSSDGKKMSKSLKNYTDPIQIINTFGADALRLY 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTES 386
           L+       D     D   K V  ++   I N  S  ++   I K               
Sbjct: 621 LIMSPVIKADDLKYSDDGVKDVLKNIIIPIWNAYSFFITYAIIDKFTPNNYVNLYKTNIL 680

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS- 445
           D+ I+S    + Q + E +    + +++  +++ + +++ ++  +      K+  D    
Sbjct: 681 DKWIISEIESLKQILNEEIDKYNLTKSIEVLLTFIDKLNNWYIRRSRRRFWKSENDNDKI 740

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                    ++ L ++L  F+P L  +I+  L   +E    
Sbjct: 741 DAYETLYYTLKNLMLMLAPFIPFLTEEIYQNLKTKNEKESI 781



 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           MK+RE       Y      +    PH GH     I D++ R+  + G +V    G D HG
Sbjct: 32  MKQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMKGKNVKRYFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    + +                     +  V + ++ ++ +   L   + +++  +
Sbjct: 90  LPVEYEVEKSLKLSGRYEIEQYGIDKFNEECRNIVLRYTKEWKKIITRLGRWVDFENNYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDLTFMESVWWVFKTLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|224532448|ref|ZP_03673074.1| isoleucine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512620|gb|EEF82995.1| isoleucine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNISLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|260061487|ref|YP_003194567.1| isoleucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785619|gb|EAR16788.1| isoleucyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 1134

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 106/281 (37%), Gaps = 12/281 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         +   +PAD    G D     F+ ++
Sbjct: 595 KPMRREADLIDVWFDSGSMPYAQWHYPFENADLIDQGACFPADFIAEGVDQTRGWFYTLH 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L+  ++     + +   +  +G+K+SK LGN +DP + +++ G DA R++++    
Sbjct: 655 AIGTLVFDSIAYRNVLSNGLVLDKEGKKMSKRLGNAVDPFQTMDDHGPDATRWYMIANAN 714

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D DG+ +                ++   +  +    P        E D  ILS
Sbjct: 715 PWDNLKFDMDGILEVKRKFFGTLYNTYSFFALYANIDRFTYGEPEVPYVERPEIDRWILS 774

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
             + ++ ++ E        RA   +   V E   + Y     ++ W+  +  PD+ S   
Sbjct: 775 ELNTLILKVDEAYAQYEPTRAARAISDFVQENLSNWYVRLCRRRFWK-GEYGPDKISA-Y 832

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 +  +A L+    P  +++++  L         +S+
Sbjct: 833 QTLYTCLETVAALMAPIAPFYSDRLYQDLTGGTSREAAESV 873



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 19/148 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +           N  P I H     I D+  R+  + G  V    G D HG  +    
Sbjct: 38  DGKPFIFYEGPPSANGMPGIHHVMARTIKDIFPRYKTMKGFQVKRKAGWDTHGLPVELGV 97

Query: 63  QNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +     TK  +                  + +  + ++ + L   +  +D   T + ++ 
Sbjct: 98  EKELGITKEDIGTKISVEAYNEACKKAVMRYTDVWNNLTEQLGYWVDMEDPYVTYKSKYM 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
           +T   L K+I DKG IYKG     YS +
Sbjct: 158 ETVWWLLKQIYDKGLIYKGYTIQPYSPK 185


>gi|15595178|ref|NP_212967.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|8928364|sp|O51773|SYI_BORBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2688775|gb|AAC67179.1| isoleucyl-tRNA synthetase (ileS) [Borrelia burgdorferi B31]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICIGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|330953013|gb|EGH53273.1| leucyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 868

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMKTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY ++LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYANELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 119/396 (30%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFYEC--- 481

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PA 258
                         G     +    M  ++++   Y             + + A  W P 
Sbjct: 482 ---------NCPKCGAPAKRETD-TMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPV 531

Query: 259 DLHVIGKDILRFHAIYWPAFLLSA--------NLPLP----------------------- 287
           D ++ G +    H +Y   F            N P                         
Sbjct: 532 DQYIGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKT 591

Query: 288 -------------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALR 326
                        K       +   G        EK+SKS  N IDP  +I++ G D  R
Sbjct: 592 WINPADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCR 651

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            F++          +   G++              V R     +           A ++ 
Sbjct: 652 LFMMFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGPSTGLDVAALSDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            ++I     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKAIRRAIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QDTPQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  +A+LL    P ++++++  L   +
Sbjct: 757 ----LMQEGVETVALLLAPITPHISHELWKQLGHNE 788


>gi|225550259|ref|ZP_03771218.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369127|gb|EEG98581.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|118475143|ref|YP_891906.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166231210|sp|A0RNX3|SYL_CAMFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118414369|gb|ABK82789.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 811

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D L+R++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRLHMGHVRNYSIGDALSRYYRNRGYNVLQPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K++   N        D L  S+       T++  +    +  + ++ +KG +Y+ 
Sbjct: 91  HKIHPKIWTYDNIDYMTKELDALGFSFSKKRLFATSDPLYTRWEQEFFIRMYEKGLVYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          + V   E  GY+ +++ Y ++LL   + 
Sbjct: 151 SAVVNWCENDQTVLANEQVEDGK----CWRCGHEVIQKEMPGYYLKITDYANELLECLKD 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LEGKWPNQVLTMQENWIGKSYGL 229



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 103/348 (29%), Gaps = 49/348 (14%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           N V   +   +      Y    +         ++P    N  +      +     +    
Sbjct: 410 NRVTNYKLRDWGISRQRYWGAPIPMIHCKKCGVVPENISNLPVKLPDDVVITGEGNPLDK 469

Query: 215 DWGIKIPDDPQ---------YIMYVWIDALTNYLTTTGYLDNPDGSKA-------KFWPA 258
               K    P+           M  + +  + Y       +      A        +   
Sbjct: 470 HSEFKNCKCPKCGSQATRETDTMDTFFE-SSWYFARFASDEKTWEDVAFDKKSVDYWMSV 528

Query: 259 DLHVIGKDILRFHAIYWPAFLLSA-------NLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           D ++ G +    H +Y   F  +        +      + + G +L  G K+SKS GN +
Sbjct: 529 DQYIGGIEHAILHLLYARFFQKALRDLGYLRDCEPFDSLLTQGMVLKDGSKMSKSKGNTV 588

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP ++I + G D  R F++      K+  ++   ++       A    N +        K
Sbjct: 589 DPDDIINKFGADTARLFILFAAPPQKELEWNDSAVEG------AFKFINRLYDRSDNAYK 642

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDA 430
                        + ++         L++  +  +N    +  +A  +  ++ ++     
Sbjct: 643 TEILPQINHSNLNKDEKYARLKVYEALKKSTDVFENSFAFNTLIAACMEALNGLN----- 697

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                        A     +  E    +  LL+  +P   +++ + LF
Sbjct: 698 -------------AQNNKDIWTEGYFIILNLLEPIIPHACHELSNELF 732


>gi|300741553|ref|ZP_07071574.1| leucine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380738|gb|EFJ77300.1| leucine--tRNA ligase [Rothia dentocariosa M567]
          Length = 831

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+   H+GHA    I D+ AR+++  G DVL   G D  G     AA 
Sbjct: 41  KGRRYVLDMFPYPSGDLHMGHAEAFAIGDMNARYYKQCGYDVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +  +N     +      I   +D  + T++  ++   + L+++   KG  Y+
Sbjct: 101 KNGTHPKEWTYKNIDTQAESFKRYAIAVDWDRRLHTSDPEYYKWTQWLFEQFYKKGLAYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +D+    +++V  GA           V       ++F+++ Y  +LL   E
Sbjct: 161 KDSMVNWCPKDQTVLANEQVVNGA----CERCGTTVTKKSLNQWYFKITDYAQQLLDDME 216

Query: 182 SHPEFI 187
                 
Sbjct: 217 QLEGKW 222



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 36/272 (13%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL-------LSANL 284
                Y++        D    + W A D++V G +    H +Y   F        L  + 
Sbjct: 520 WYFLRYVSPRYAEGPFDPQAIREWGAVDMYVGGVEHAILHLLYARFFTKVIRDLGLIEHS 579

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K + + G +L+ G+ +SKSLGN ++  E +++ GVDA+R  ++       D   D  
Sbjct: 580 EPFKALMNQGQVLNGGKAMSKSLGNGVNLGEQLDKFGVDAVRTTMIFASPPEDDV--DWA 637

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-DESILSVCSRVLQEIRE 403
            +    +         +     S            PG    S D ++  + +R + ++++
Sbjct: 638 DVSPAGSQKFLARAWRIAQDVTS-----------EPGVDAASGDANLHKLVARTVHDVKQ 686

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +     +  +A+ + LV+   +  D         + P  A+  +    E    +AILL 
Sbjct: 687 LLDAGKFNVVVAKTMELVNATRKAID---------SGPGGANPAVR---EAAETIAILLS 734

Query: 464 AFVPKLANKIFDILFVADENRC--FQSLDQRL 493
            + P  A  ++ +L   +      F  +D+ L
Sbjct: 735 LYAPYTAEDMWHVLGHDNPVLTAGFPQVDESL 766


>gi|66047579|ref|YP_237420.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500570|sp|Q4ZN90|SYL_PSEU2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|63258286|gb|AAY39382.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Pseudomonas syringae pv. syringae B728a]
          Length = 868

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    +     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMKTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 120/396 (30%), Gaps = 89/396 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP--------------------KKVFSH 293
           + G +    H +Y   F            N P                      KK + +
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 294 GF----------------ILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                             +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISARLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTES 386
           +          +   G++              + R   +          T     A ++ 
Sbjct: 655 MFASPPDMSLEWSDSGVEGSH---------RFLRRVWRLAQAHVTQGPSTGLDVAALSDE 705

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            ++I     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA 
Sbjct: 706 QKAIRRAIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QDTPQDRA- 756

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +  E +  +A+LL    P ++++++  L   +
Sbjct: 757 ----LMQEGVETVALLLAPITPHISHELWKQLGHNE 788


>gi|312149303|gb|ADQ29374.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|213418567|ref|ZP_03351633.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 232

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 28/228 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+ ++ A+ Y N   H+GH  E I ADV  R+ R+ G +V F    D HG  I   AQ 
Sbjct: 6   KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQ 65

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
            G+T +  + + S+  +      +ISYD++  T    + +   +++ ++ + G I     
Sbjct: 66  LGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTI 125

Query: 125 SGWYSLRDEAYYNDDEV-----------YKGADGQYYNAQHNPVQWMEE----------- 162
           S  Y      +  D  V             G + +   A ++P + +E            
Sbjct: 126 SQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVM 185

Query: 163 ---EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              E +FF L ++ + L ++  S     L  +  N++  + +SGL+  
Sbjct: 186 RDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQW 230


>gi|157825706|ref|YP_001493426.1| leucyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166231638|sp|A8GNE3|SYL_RICAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157799664|gb|ABV74918.1| leucyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 870

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLAMLPYPSGKIHLGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N +     +  SY     I + + +++   +  + ++ ++   
Sbjct: 84  AIKNNSHPKDWTYSNIENMKKQLKSMGFSYAWSREINSCDPQYYKHEQKFFLELYERNLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+    + +F +++ Y ++LL+ 
Sbjct: 144 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAVVEKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   +    E       G
Sbjct: 200 IQNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/414 (12%), Positives = 127/414 (30%), Gaps = 51/414 (12%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V     G       +   W     
Sbjct: 413 ISRQRFWGCPIPMIHCEACGIVPVPYKDLPVTLPDDVSFDGHGNPLAHHPS---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCNKPAIRETDTFDTFFESSWYFTRYCNSNATEMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +    +  +        +   + +        +   +P  ++    
Sbjct: 527 --VMHLLYARFFTKVMNEQHYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPEEVVKKGN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              +K  +   +  + EK+SKS  N+ID   + ++ G DA+R F++ +    KD  +   
Sbjct: 585 EFFRKESNDRVVQGRIEKMSKSKKNLIDLETMQKQYGADAIRLFVLSDSPPEKDLEWFVS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDG-------------------------MIPT 379
           G++    +   N +  +   ++  +  + +                          M   
Sbjct: 645 GIEG--CSRFINKLEQMFE-AIKFLYNEANKEEFEGNTERSTAAYTLVREDASTGSMYKL 701

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
           P   +  ++ +  +    ++ + E++++  ++RA+A++  L + +          E+ K 
Sbjct: 702 PLEASYINKELNRLVHFTIKHVAEDIKHFALNRAIARMRELANAISS--------EISKD 753

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
             D     +         L  LL  F+P +  +I+  L   +      F + D+
Sbjct: 754 KID-----VNTVRHGFNILVQLLNPFIPHITEEIWQKLGNKERLYKSDFPAFDE 802


>gi|42519974|ref|NP_965889.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|60390721|sp|Q73IT7|SYL_WOLPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|42409711|gb|AAS13823.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 838

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+     YP+ + H+GH     I DV+AR+ R +G +VL   G D  G     AA
Sbjct: 25  KQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           ++  ++ + +  +N  N R     + +SY+    + T E  ++   +  +      G  Y
Sbjct: 85  RDNNISPETWTKENIDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAY 144

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  +   +F +++ + + LL   
Sbjct: 145 RKESWVNWDPVDQTVLANEQVVDGKG----WRSGAVVEKRKLSQWFLKITDFAEDLLKCL 200

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +S   +   ++   E       G
Sbjct: 201 QSLKNWPEKVKTMQERWIGKSEG 223



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 124/396 (31%), Gaps = 83/396 (20%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR-- 193
            N      G   Q Y     P+ + ++ G           +L           P+++   
Sbjct: 421 INYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVVLPIDVEFTSGGNPLDKHPT 480

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
            + +   K G               K  +        + ++   +        + D    
Sbjct: 481 WKFVDCPKCG---------------KQAERETDTFDTFFESSWYFAAFCSEDKSIDKDAC 525

Query: 254 KFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPL----PKKVFSHGFILHKG 300
             + P D ++ G +    H +Y                  P      + +  H     + 
Sbjct: 526 NRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFDIKEPFSTLITQGMVCHATYKDEN 585

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS  N +DP  +IE+ G D  R F++ +    
Sbjct: 586 GKWLFPAEAKELIARGAKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPE 645

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  +  DG++    +   N +  +V + +  +   YD    T G              +
Sbjct: 646 KDMEWSDDGVEG--CSRYVNKLWRMVMQ-LRPVNIHYDNENVTGGLL-----EYRKKIHK 697

Query: 397 VLQEIRENMQNQLIHRAL---AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +L  + ++++N  ++  +    ++ +L++E+D                    T   +  E
Sbjct: 698 LLHGLTDDLENCRLNCVVAKFREMTNLIAEID------------------VKTGKSLIDE 739

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            I  L  +++ F+P LA  ++  +      +  +SL
Sbjct: 740 GICILIRVIEPFIPHLAESLWQEIGGQPWPKADESL 775


>gi|188994381|ref|YP_001928633.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594061|dbj|BAG33036.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 1137

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 73/446 (16%), Positives = 139/446 (31%), Gaps = 14/446 (3%)

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTEKRHHDTCRILWKKISDK 116
           +    QN     +         +R    VL    D  FIRTT  +              +
Sbjct: 441 VMLKMQNRVFRIEKMTHNYPHCWRTDKPVLYYPLDSWFIRTTACKEEMIANNGKIYWKPE 500

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                       +L+D                        +     E  +  +     K 
Sbjct: 501 STGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDGSEEICIGSVEELYNEIEK-AVKA 559

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
                +      P     E  + +      +         G  +  +   ++ VW D+  
Sbjct: 560 GMMERNPWAGFKPGVYTEENYAKIDLHRPFVDEITLCSPSGQPMRRELD-LIDVWFDSGA 618

Query: 237 NYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
                  Y             +PAD    G D     F  ++  A ++S        V +
Sbjct: 619 MPYAQMHYPFENRERVKDGSVFPADFIAEGVDQTRGWFFTLHAIATMISGTSSFKVVVSN 678

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  KG K+SK LGN +DP E I++ G D LR++++   +   +  +D DG+++    
Sbjct: 679 GLVLDKKGNKMSKRLGNAVDPFETIKKYGSDPLRWYMITNSSPWDNLKFDTDGVEEVRRK 738

Query: 353 DLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                       ++   L  +  +          E D  ILS  + +++E+ + + +   
Sbjct: 739 FFGTLYNTYQFFALYANLDGFTGEEESIPFAKRPEIDRWILSELNTLIREVDDQLSDYEP 798

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            RA   +   VSE   + Y    +         +   +        +  ++ L+    P 
Sbjct: 799 TRAGRAISDFVSENLSNWYVRLSRRRFWAGDMTEDKLSAYQTLYTSLLTVSKLMAPISPF 858

Query: 469 LANKIFDILFVADEN---RCFQSLDQ 491
            A++++  L   DE+     F  LDQ
Sbjct: 859 YADRLYRDLTGKDESVHLALFPQLDQ 884



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 24/191 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D + R+  + G  V    G D HG  +    + +   TK  
Sbjct: 49  PPSANGMPGIHHVMARAIKDTICRYKTMKGFRVDRKAGWDTHGLPVELGVEKSLGITKED 108

Query: 73  V-----------------DQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKI 113
           +                  + ++ + D+   +    D      T + R+ +T   L  ++
Sbjct: 109 IGKSISVEEYNAACRRDVMKFTKEWEDLTHKMGYWVDMEHPYITYDNRYIETLWWLLAEL 168

Query: 114 SDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
             KG +YKG     YS            N    Y+        AQ   +    E      
Sbjct: 169 YKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCVAQFKIMDPKPEMQLHGD 228

Query: 169 LSAYQDKLLSY 179
                     +
Sbjct: 229 AFFLAWTTTPW 239


>gi|148244578|ref|YP_001219272.1| valyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326405|dbj|BAF61548.1| valyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 915

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 76/481 (15%), Positives = 157/481 (32%), Gaps = 91/481 (18%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           T     +     FR   DV++I       T + + ++     +  +              
Sbjct: 273 TPAHDFNDYEVGFRHNLDVINIL------TDDAKINNGVNSAYTDMDRFKARK-----QI 321

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
               D     +            +  +  ++    + +F ++       +   ++     
Sbjct: 322 IQDLDNQGLLEKIEPHKLMIPRGDRTNAIIEPYLTDQWFVKIKPLVQPAIDAVKNRDIRF 381

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY------------------- 226
           +P    ++      + ++D  +SR+   WG  I    D +                    
Sbjct: 382 IPENW-SKTYFNWMNNIQDWCISRQ-IWWGHRIPAWYDEKGNIFVADSLKQAQEQAGEGI 439

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                  ++  W  +     +T G+ +      ++F+P ++ V G DI+ F    +    
Sbjct: 440 TLIQDKDVLDTWFSSALWPFSTLGWPEKTP-DLSRFYPTNVLVTGFDIIFFWVARMIMFG 498

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------ 319
              +  +P      +      +G+K+SKS GNV+DPI++I                    
Sbjct: 499 LKFTGEVPFKDIYITGLIKDGQGQKMSKSKGNVLDPIDLINGITLKNLLEKRTQGLMQIK 558

Query: 320 -------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                               G DALR+      +   D  +D   ++     +  N + N
Sbjct: 559 MAEKIKKQTRKEFANGIPAFGTDALRFTFATLASFSCDIKFDIKRVEG--YRNFCNKLWN 616

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             SR V M LK     I T    + +DE ILS        + +++ +  I      +   
Sbjct: 617 -ASRFVLMNLK--GKTIDTNAQLSTADEWILSRLQNTKINVEKHLSDYRIDLMSQTLYEF 673

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +     D Y +  K   L + N  +  T   + ++V+ ++  LL   +P +  +IF+   
Sbjct: 674 IWHDYCDWYLELSK--SLLQNNKTKTGT-QAILIKVLSEIVTLLHPIIPFITEEIFEQCN 730

Query: 479 V 479
           V
Sbjct: 731 V 731



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 22/181 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA++  I D+L R+HR +G   L+  GTD  G      
Sbjct: 31  TSKNAYCIMLPPPNVTGSLHMGHAFQHTIMDILTRYHRANGEQTLWQPGTDHAGIATQMV 90

Query: 62  AQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                  T K++  +       +   R +   +D   + F  T +  
Sbjct: 91  VERQLATQDMTRHELGREKFTQKIWDWKAQSGDTITSQMRRLGFSVDWEKNRF--TMDNG 148

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +  + ++ ++  +G IY+G     +        +D EV    +         PV    
Sbjct: 149 LSNAVKKVFIQLFKEGLIYRGKRLVNWDPILHTAVSDLEVINTEEQSSLWYIRYPVTNTN 208

Query: 162 E 162
           E
Sbjct: 209 E 209


>gi|118594120|ref|ZP_01551467.1| valyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118439898|gb|EAV46525.1| valyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 934

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 122/364 (33%), Gaps = 54/364 (14%)

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             + +            +      +P    +    FV   L++     K   +  ++  D
Sbjct: 400 NTYNQWLENIQDWCISRQLWWGHQIPAWYGDNQEIFVAHTLEEAQSLAKKDGYTGQLRRD 459

Query: 224 PQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
              ++  W  +          T  Y    + +  ++ P+ + V G DI+ F    +    
Sbjct: 460 DD-VLDTWFSSALWPFSTLDWTPEYPAQSNSALDRYLPSSVLVTGFDIIFFWVARMVMMT 518

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------- 318
             ++  +P             +G+K+SKS GNV+DPI++I+                   
Sbjct: 519 KYVTNRIPFKHVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGISLDDLLKKRTTGLMNPK 578

Query: 319 ------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                               G DALR+      + G+D  +D          +  N + N
Sbjct: 579 QAESIIKKTTKEFPEGISSYGTDALRFTFASLASPGRDIKFDLQRCDG--YRNFCNKLWN 636

Query: 361 LVSRSVSMILK----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
             SR V M  K     +D  +    +F+++D  I+S     L+ I    ++        +
Sbjct: 637 -ASRFVLMNCKTDDNGFDECVDGYLSFSKADRWIVSRLQLTLKNIERAYEDYRFDLVSQE 695

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   + +   D Y +  K    +    ++ +T     +  +  +  +    +P +  +I+
Sbjct: 696 IYQFIWDEYCDWYLELAKVQIQQGGEAEKRAT-RRTLLATLETILRIAHPVIPFITEEIW 754

Query: 475 DILF 478
            I+ 
Sbjct: 755 QIIG 758



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 23/171 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I         Q H+GH +   + D+L R+HR+ G + L+  GTD  G       + 
Sbjct: 38  ENFSILLPPPNVTGQLHMGHGFNQTLMDMLTRYHRMKGDNTLWQPGTDHAGIATQIVVER 97

Query: 64  -------------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +N       +  R +    D   + F  T ++    
Sbjct: 98  QLDQEGISRHDLGREKFIEKVWEWKNFSGGAITKQMRRLGTSPDWGRERF--TMDEGLSK 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           +   ++ K+   G IY+G     + +  +   +D EV +  DG  +    N
Sbjct: 156 SVTEVFVKLYRDGLIYRGKRLVNWDVTLQTAVSDLEVVQ-EDGNGFLWHIN 205


>gi|225549417|ref|ZP_03770389.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370045|gb|EEG99486.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|33861446|ref|NP_893007.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|48428530|sp|Q7V1I2|SYL_PROMP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634023|emb|CAE19348.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 858

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     A
Sbjct: 41  SNKEKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFQGKVVLHPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  QN  + +    +L +S  +D    T ++ ++   + L+ ++   G +
Sbjct: 101 AIERGINPDKWTKQNIAHMKSQLKLLGLSVDWDREFATCDENYYVWTQFLFLELHKAGLV 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V          A    V+      +F +++ Y ++LL  
Sbjct: 161 YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGA---IVEKKLLTQWFLKITDYAEELLQD 217

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E   E+   ++   E       G
Sbjct: 218 LEKLNEWPERVKIMQENWIGKSIG 241



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 79/195 (40%), Gaps = 28/195 (14%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK    +  +    EK+SKS  N IDP  VI++ G D  R F++ +    KD  +    +
Sbjct: 607 PKDPKDNSKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDSDV 666

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +        I  L      +   + D          E++ S+L   +  ++EI  +++
Sbjct: 667 EGQYR--FLCRIWKLF-----LDYSNNDITHEADKLKKENESSLLKSINIAIKEISNDIK 719

Query: 407 NQLIHRALAQVISLVSEVD---RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           N   + A+++++   + +     Y +                    +  E + +  ILL 
Sbjct: 720 NNQFNTAISELMKFYNSISSNLNYVN------------------KDLRRESLMKFCILLA 761

Query: 464 AFVPKLANKIFDILF 478
            F P ++++I+ ++ 
Sbjct: 762 PFAPHISDEIWHLIG 776


>gi|219685784|ref|ZP_03540594.1| isoleucine--tRNA ligase [Borrelia garinii Far04]
 gi|219672669|gb|EED29698.1| isoleucine--tRNA ligase [Borrelia garinii Far04]
          Length = 912

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 132/395 (33%), Gaps = 19/395 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+  Y   Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNYPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQY 226
              +      ++ +     +  +   ++    K  L++LS  +        I     P  
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELEELSGQKIEDLHKDKIDKITWPSK 506

Query: 227 ----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGTFIRTSEVLDCWFESGAMPYASNHYPFENESNFKNTFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP+EVI   G DALR +L+    
Sbjct: 567 ILGASLFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMEVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPAKNLSLVKSNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + + + +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNKEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              I+ L ILL  F+P +  +I+  L   ++ +  
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSI 781



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%)

Query: 1   MKERE-----KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
           M++RE       Y      +    PH GH     I D++ R+  + G  V    G D HG
Sbjct: 32  MEQREGCEEFTFY--DGPPFATGLPHFGHFVPNTIKDIIPRYQTMKGKYVKRNFGWDTHG 89

Query: 56  QKIAKAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIR 96
             +    +                       K  V + +  ++++   L   + ++   +
Sbjct: 90  LPVEYEVEKKLGISGKYEIENYGIENFNKECKKIVLRYTEEWKNIILRLGRWVDFEKGYK 149

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           T +    ++   ++K + +KG IY+  Y   YS +     ++ EV  G
Sbjct: 150 TMDISFMESVWWVFKNLYNKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|312148441|gb|ADQ31100.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 1042

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 136/413 (32%), Gaps = 19/413 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              I+ L ILL  F+P +  +I+  L   ++ +     D        ++KT +
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIE 799



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|114571496|ref|YP_758176.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122314962|sp|Q0AKF5|SYL_MARMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114341958|gb|ABI67238.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 865

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH+    + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 33  NKPKYYVLEMFPYPSGRIHVGHSRNYTMGDVVARYKRARGFDVLHPMGWDAFGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           ++ GV    +   N    R     L ++ D    I T +  ++   + ++ ++ ++G ++
Sbjct: 93  RDRGVHPGAWTHDNIDAMRGQLQRLGLALDWSREIATCDPSYYRHQQAIFLRLMERGLLH 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   E + +FF+++ Y D+L    
Sbjct: 153 RKTAKVNWDPVDQTVLANEQVIDG----RGWRSGALVVQRELDQWFFKITEYADELTDAL 208

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E    +   +            G
Sbjct: 209 EELDRWPDKVRTMQSNWIGRSRG 231



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 126/407 (30%), Gaps = 94/407 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS--FVKSGLK 205
           Q Y     PV    + G           +L    +      P+ER     +    K G  
Sbjct: 436 QRYWGCPIPVIHCADCGVVPVPEDQLPVVLPEDVTFDHPSNPLERHPTWKNADCPKCGKA 495

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIG 264
               +               ++   W      + +          S A+ W P D +V G
Sbjct: 496 GRRETDTL----------DTFVCSSW--YFLRFTSPWSEDTPFLASDAEHWMPVDQYVGG 543

Query: 265 KDILRFHAIYWPA----------FLLSANLPLPKKVFSHGFILHKG-------------- 300
            +    H +Y               + +  P    +F+ G + H+               
Sbjct: 544 IEHAILHLLYARFFTRALNDAGLMNMKSGEPFAG-LFTQGMVTHETYKSADGKWLSPEEV 602

Query: 301 ---------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                                EK+SKS  NV+D    IE  G DA+R+F++ +    +D 
Sbjct: 603 DLRKDGAVEMSTGKPVSVGAIEKMSKSKKNVVDLDAFIESYGADAVRWFVLSDSPPERDV 662

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDE-----SILSV 393
            Y   G++         G+   V R  S +          PG  T  +D       I   
Sbjct: 663 EYTDSGVE---------GVWRFVQRLWSTVTS---LPEGAPGPLTVAADASGPALEIRRA 710

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + L  + + ++    + A+AQV  LV+ + +Y            +   A+       E
Sbjct: 711 AHKALHAVTDAIEGFRFNSAVAQVHDLVNVLRKYV--------PSDDAGIAAKT-----E 757

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            +  LA ++  FVP LA + ++ L    E     +      P  ++ 
Sbjct: 758 ALGILARIIAPFVPHLAEECWEHLG--GEGLVIDAAWPEADPALLVE 802


>gi|284034987|ref|YP_003384917.1| isoleucyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283814280|gb|ADB36118.1| isoleucyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 1148

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 99/272 (36%), Gaps = 13/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           ++      ++ VW D+         Y         K +PAD    G D     F  ++  
Sbjct: 609 QVMQRESDLIDVWFDSGAMPYAQWHYPFENQDVFNKAFPADFISEGVDQTRGWFFTLHAI 668

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A +L  ++     V +   +   G K+SK LGN ++P E +++ G DA R++++      
Sbjct: 669 AGMLFDSVAFKNVVSTGLVLDKNGNKMSKRLGNAVNPFETLDKYGADATRWYMITNAEPW 728

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSV 393
            +  ++ DG+ +     L   + N  +        D   + G         E D  ILS 
Sbjct: 729 DNLKFNTDGIGEVQ-RKLFGTLSNTYNFFALYANLDQFTFAGRTVPVAERPELDRWILSK 787

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPD---RAST 446
              ++  + E   +    +A   V   V++   + Y     ++ W     + +       
Sbjct: 788 LQSLILAVEEQFDSYNPTKAGRLVQDFVNDQLSNWYVRLSRRRFWTGAAPDGELTTDKRA 847

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 E +  ++ L+    P  A+ ++  L 
Sbjct: 848 AYETLHECLSTVSQLMSPIAPFYADWLYRNLN 879



 Score = 53.6 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 32/122 (26%), Gaps = 7/122 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P I H     I D+  R+  L G  V    G D HG  I   
Sbjct: 41  EGKPSFTFYEGPPSANGTPGIHHVMARSIKDIFCRYKTLKGFQVERKGGWDTHGLPIELQ 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +     TK  + +             IS +++ R   +                G    
Sbjct: 101 VEKELGITKDDIGKPESE-------GGISVEEYNRKCRETVMRFTDQWNSLTEKMGYWVD 153

Query: 122 GC 123
             
Sbjct: 154 LE 155


>gi|150400195|ref|YP_001323962.1| valyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012898|gb|ABR55350.1| valyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 886

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 147/396 (37%), Gaps = 27/396 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-------VQWMEEEGYF 166
            + G  ++        + D+ + N  ++    +   +     P       ++W+E+ G+ 
Sbjct: 336 QNVGSCWRCKTPIEIIVGDQWFVNVRKLLNDVEKASHEINWVPEHMKSRLLKWIEDMGWD 395

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +         H +    I    E        +     S  T   G         
Sbjct: 396 WCISRQRIFATPIPVWHCKICGNIIVAKE----EDLPIDPTKESPYTCACGNLNLTPETD 451

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    +   G+L +      K +P  L   G DI+R  A Y    +  L++  
Sbjct: 452 VLDTWMDSSITPMVVAGWLKDEKF-FEKHYPVQLRPQGHDIIRTWAFYTIIRSLALTSEK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GNV++P E+ +  G DALR +       GKD  +   
Sbjct: 511 PWNEIVVNGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW-ASNSTIGKDVPFAWK 569

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEI 401
            ++    +     I N    +   I  +    + +   F      D  ILS  + +++ +
Sbjct: 570 EVE--YGSRFLRKIWNACKFAKMNIPDEVISNLKSIENFEIENPIDLWILSKLNDLIKRV 627

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVI 455
             +++N  I+  + ++   +     D Y +  K     K   + A        Y   +VI
Sbjct: 628 STDLENYRINTVV-EIQKFLWHEFCDNYIEMVKHRLYSKETSESAKKDKLMAQYSLYKVI 686

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +   L+  F P  A  + +I  V D N  + ++++
Sbjct: 687 TETLKLIAPFTPHFAEIVGEIYEVDDLNTSWPTINE 722



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGKMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                ++N    R+    L IS  +D    T    +    
Sbjct: 91  VEEVNNITKSDINRHEFRKLCVELTEENVEKMRNQVKSLGISIDWDQEYITMMPEYVKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++  KG IY+G +   +  R E
Sbjct: 151 QTAFLRMYKKGLIYRGKHPVNWCPRCE 177


>gi|256820245|ref|YP_003141524.1| valyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581828|gb|ACU92963.1| valyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 878

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 123/379 (32%), Gaps = 28/379 (7%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  G   +        L D+ +   D + + A       +   +   + E  +       
Sbjct: 338 NKVGTSERTKAVIEPRLSDQWFLKMDTLIQPAIKAVLEDESIKLYPKKFENTYRHWVENV 397

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-------KSGLKDLSLSRKTFDWGIKIPDDPQY 226
                  +      +P     E            ++       S         +  D   
Sbjct: 398 RDWNISRQLWWGQQIPAYYYGEGKDQFVVAKTKAEALALAKEKSGNAHLTEADLRQDEDA 457

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            +  W  +    ++    + +  +     ++P +  V G DIL F    +    +     
Sbjct: 458 -LDTWFSSWLWPMSVFNGILEPNNPEIEYYYPTNDLVTGPDILFFWVTRMIVAGYEYKGE 516

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P      +      +  K+SKSLGN  D +++I + G D +R  L+   A G D  +D+
Sbjct: 517 RPFSNVYLTGLVRDKQRRKMSKSLGNSPDALKLISDYGADGVRVGLLLSSAAGNDLLFDE 576

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              ++        G GN +  +  ++     D  +  P A   + +   +  + VL E+ 
Sbjct: 577 ALCQQG------KGFGNKLWNAFQLVKGWQVDSSVAQPTAAQLALQWFEAKFNAVLTEVE 630

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQL 458
           ++ +   I  AL  +  L        D    W L+   P+    +   T E        L
Sbjct: 631 DHFEKYRISDALMAIYKLAW------DDFCAWLLEMVKPEYGKPMDKATYEGVVAAFENL 684

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  F+P L  +I+  L
Sbjct: 685 LKLLHPFMPFLTEEIWQSL 703



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ER    I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  ERTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +   V    +  Q      +    L  S D      T ++    
Sbjct: 92  VAKLKEQGIKKSDLTREEFLVHAWEWTHQYGGVILEQLKKLGCSCDWERTKFTMDEELSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLYNKGQIYRGHRMVNWDPEAKTTLSDEEVIY 190


>gi|298492550|ref|YP_003722727.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234468|gb|ADI65604.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 859

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  +   YP+ + H+GH     I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 35  NQPKFYALSMFPYPSGRLHMGHVRNYTITDVIARLKRMQGYLVLHPMGWDGFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIY 120
            + GV    +  QN    R     L +S D    + T    ++   + ++ ++   G  Y
Sbjct: 95  IDRGVPPAKWTYQNIEQMRQQLQRLGLSLDWECELATCSPDYYKWTQWIFLQLLAAGLAY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V    +          V+      +FFR++ Y ++LL+  
Sbjct: 155 QREAAVNWDPIDQTVLANEQV---DNEGRSWRSGAIVERKLLRQWFFRITDYAEELLNDL 211

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++           G
Sbjct: 212 DKLTGWPERVKLMQANWIGKSIG 234



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 104/324 (32%), Gaps = 78/324 (24%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y          D +K  +W P D +V G +    H +Y   
Sbjct: 493 KRETDTMDTFIDSSWYFLRYPDVKNEEKIFDSNKVNYWMPVDQYVGGIEHAILHLLYSRF 552

Query: 278 FL--------LSANLPLPK----------------------KVFSH--------GFILHK 299
           F          + + P  K                       + SH             +
Sbjct: 553 FTKVLRDRGLFNFDEPFQKLLTQGMVKGLTYMNPKKYGKDKWIPSHLVDANNPVDPQTGE 612

Query: 300 GEK-----ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
             K     +SKS GN + P +VI + G+D  R F++ +    KD  +D+  ++ +     
Sbjct: 613 PLKRLYATMSKSKGNGVAPEDVINKYGIDTARMFILFKAPPEKDLEWDEADVEGQFR--F 670

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRA 413
            N +  LV+   +                ++ ++ +       +Q I E++      + A
Sbjct: 671 LNRVWRLVTNYAA---AGVCKQKSELDKLSKGEKDLRRAIHIAIQAITEDVGDEYQFNTA 727

Query: 414 LAQVISLVSE-----VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           +++++ L +       +                        +  E I+ L I+L  F P 
Sbjct: 728 ISELMKLSNALTDASCNN---------------------SPIYAEGIQTLVIMLAPFAPH 766

Query: 469 LANKIFDILFVADE--NRCFQSLD 490
           + ++++ +L   +    R + S D
Sbjct: 767 IGDELWQLLGNKNSVHTRTWPSFD 790


>gi|195941957|ref|ZP_03087339.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 1042

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 130/395 (32%), Gaps = 19/395 (4%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE--GYFFR 168
             +      Y+      Y      + N +++              P    +     +   
Sbjct: 387 NYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLEN 446

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---------KTFDWGIK 219
              +      ++ +     +  +   ++    K  L++LS  +             W  K
Sbjct: 447 AKDWAISRNRFWGNPIPIWICSKTGKKICVGSKKELENLSGQKIEDLHKDQIDKITWPSK 506

Query: 220 ---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     ++  W ++      +  Y    + +    +PAD    G D     F+ + 
Sbjct: 507 DGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLT 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L  N      + +   +   G K+SKS  N  DP++VI   G DALR +L+    
Sbjct: 567 ILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILS 392
              D     D   + V  ++   I N  S   +   I K       +       D+ I+S
Sbjct: 627 VKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIIS 686

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVT 451
               + + +   +    + +++  ++  + +++ ++  +      K+  D+  +      
Sbjct: 687 ELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETL 746

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              I+ L ILL  F+P +  +I+  L   ++ +  
Sbjct: 747 YYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSI 781



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKY 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++++   L   + ++   +T +    ++   ++K +
Sbjct: 107 EIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG IY+  Y   YS +     ++ EV  G
Sbjct: 167 YEKGLIYESYYVLPYSPKLATPLSNFEVNLG 197


>gi|326693728|ref|ZP_08230733.1| leucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 803

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+ Q  H+GH       D+++RF R +G +VL   G D  G    +
Sbjct: 28  TSKPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRFKRANGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  +N  +FR+    L +SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAMKTGHNPADFTSENIDHFREQIKALGLSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D     ++EV  G          NPV+      +  +++AY D+L+ 
Sbjct: 148 AYESNMMVNWDPIDRVVLANEEVIDGKS----ERSGNPVERKALRQWVLKITAYADRLVD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         E++   I   K
Sbjct: 204 DLEDLDWPEAIKEQQRNWIGRSK 226



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 105/285 (36%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPRNKEQLADPDKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P +++ E G D LR + +      +   + +
Sbjct: 557 EPFQKLVNQGMILGENHEKMSKSKGNVVNPDDIVAEFGADTLRVYEMFMGPLTQSKPWSE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +G+               + R   +++ D   +             +  +  + ++++ E
Sbjct: 617 EGITGS---------RRWLDRVWRLLIDDEGQLRDRVTTVNSG--ELDKIYHQTVKKVTE 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  V+E  +                       + ++ +     LL 
Sbjct: 666 DLENMRFNTAISQMMVFVNEAYK--------------------ADSLFLDYMTGFVQLLA 705

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            F P L+ +++  L   + +  + +      P  ++  T + IF 
Sbjct: 706 PFAPHLSEELWVRLGQ-EASISYVAWPTY-DPAQLVEDTVEIIFQ 748


>gi|228925025|ref|ZP_04088154.1| tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228834602|gb|EEM80112.1| tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 545

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 87/527 (16%), Positives = 199/527 (37%), Gaps = 46/527 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   ++      N   HIGH     + ADV +RF ++ G +V+++T  D+H   IA  A+
Sbjct: 2   KTFIVTATPPTTNGDLHIGHLSGPYLAADVFSRFQKMKGNNVIYSTSGDDHQTYIATTAK 61

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT-TEKRHHDTCRILWKKISDKGDIYKG 122
             G T +  V+  ++  +D      I+ + F  +   + H    + ++KK+ +KG   + 
Sbjct: 62  RKGWTPEKLVEYYTKKVQDTLGAAFINLNIFSNSLNNQEHIKFVQSIFKKLYNKGVFVEK 121

Query: 123 CYSGWYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                +    + Y  +  +            G   +     ++P++ +         +  
Sbjct: 122 QKEIHFCNNCDQYLFESFIKGECPFCNEKASGNLCEACGRINDPIELINPVCGLCGETPT 181

Query: 173 QDKLLSYYES-HPEFILPIERRNEVISFVKS--GLKDLSLSRKTFD--------WGIKIP 221
                  +          +E  N  +S+      L +  +S+   D        WGI +P
Sbjct: 182 ISSYKGMFFPLENYRDQLVEYYNSRVSWRPHLKELCNWIVSKPIPDYPVTYPTKWGIPVP 241

Query: 222 DD--PQYIMYVWIDALTNYLTTTGYL------DNPDGSKAKFWPADLHVIGKDILRFHAI 273
                   + VW +    ++ TT         +    +  +     +  +G D   F+A+
Sbjct: 242 IKGYTNQCINVWFEMYPGHIATTNKWLQLNDSNFSVENLCENNATLVQFLGYDNSFFNAV 301

Query: 274 YWPAFL--LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
              A    +     LP+ + ++ F L +  K S S  + I   ++++EV  D+LRY++ R
Sbjct: 302 LHVATCFAIDEGYLLPEHIITNEFYLLEHAKFSTSREHAIWGSDLLKEVPADSLRYYVCR 361

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    +      +    +L +   N +S  + +I +    +           ++ +
Sbjct: 362 TNPEHTQTNFSLKDFNQIRKNELEDTWFNTISTFIEIIKETSMDLSLFNDFIDLKAKATV 421

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ----KPWELKKTNPDRASTV 447
           S   + L+   + + +  + +A   +   +     Y D Q    K   + K    R +++
Sbjct: 422 SWAKKSLESFYD-INHFSLRQASQVLHEYLQICKDYLDTQVIPVKDINM-KIYLQRLASL 479

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFV---ADENRCFQSLDQ 491
            Y+    I+ L    Q  +P  +  + + L V   +++N  ++++++
Sbjct: 480 GYM----IQALIYFAQPILPSFSMTLKEALGVDVSSNQNLNWENIEK 522


>gi|163840682|ref|YP_001625087.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954158|gb|ABY23673.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 898

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E+ Y+     YP+   H+GHA   ++ DV+ R+ +L G DVL   G D  G     AA
Sbjct: 104 SKERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFDVLHPVGWDSFGLPAENAA 163

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            I  D    ++T++  ++   + L+ +  ++G  Y
Sbjct: 164 IKRNAHPAEWTYANIETQAASFKRYAIGVDWSRRLQTSDPEYYRWTQWLFLRFYERGLAY 223

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D     +++V  GA          PV       ++F+++ Y D+LL   
Sbjct: 224 RKNSPVNWCPKDLTVLANEQVINGA----CERCGTPVTKKNLNQWYFKITDYADRLLDD- 278

Query: 181 ESHPEFILPIERRNEVISF 199
            +  E   P        ++
Sbjct: 279 MAQLEGHWPERVLAMQRNW 297



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 103/280 (36%), Gaps = 39/280 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFL---- 279
           +  ++D+   YL  T               ++   D +V G +    H +Y   F+    
Sbjct: 578 IDTFVDSSWYYLRYTSPEYTDGPFDPAAATRWMGVDQYVGGVEHAILHLLYSRFFVKVLN 637

Query: 280 ----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L A  P  K + + G +L+ G+ +SKSLGN +D  + ++  GVDA+R  +V     
Sbjct: 638 DLGLLEAKEPF-KALLNQGQVLNGGKAMSKSLGNGVDLSQQLDRFGVDAVRLTMVFASPP 696

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             D   D   +    +A        L     S I  D     P  G     D ++ SV  
Sbjct: 697 EDDV--DWADVSPSGSAKFLARAWRLAQDVTSEIGVD-----PATG-----DRALRSVTH 744

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R L E  + +     +  +A+ + LV+   +  D+                      E +
Sbjct: 745 RTLSEAADLIDAHKFNVVVAKTMELVNITRKSIDS------------GCGPADPAVREAV 792

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
             +A++L  F P  A  I+  L   D      + ++D  L
Sbjct: 793 EAVAVILSLFAPYTAEDIWAELGHQDFVARASWPTVDDSL 832


>gi|195167926|ref|XP_002024783.1| GL17916 [Drosophila persimilis]
 gi|194108213|gb|EDW30256.1| GL17916 [Drosophila persimilis]
          Length = 871

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ +   YP+   H+GH     I+D +ARF R+ G +V    G D  G     AA  
Sbjct: 62  DKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFQRMCGKNVFQPIGWDSFGLPAENAANQ 121

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  QN    +     L  S+D    + T   +++   + L+  +  +G  Y+ 
Sbjct: 122 RGVEPATWTQQNIAQMKQQLQRLGCSFDWTHELSTCSPQYYRWTQHLFLMLHKRGLAYQN 181

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY-- 180
                +   D+    D++V          A+   V+    + +F R SAY  +LL     
Sbjct: 182 EALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLKQWFIRTSAYAKQLLDGLDD 238

Query: 181 ----ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
               +      L      E   +  + L       + +    +   DP 
Sbjct: 239 PTLRDWRDIINLQRHWIGECNGYAFTLLTSACNLLRVWTANPEHLKDPN 287



 Score = 46.7 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 91/318 (28%), Gaps = 71/318 (22%)

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKD 266
            +    G          M  ++D+   YL      ++         ++F P DL++ GK+
Sbjct: 448 CECPKCGDPKAKRETDTMDTFVDSSWYYLRFLDAHNSERIFDPTLASQFMPVDLYIGGKE 507

Query: 267 ILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFI---------------------- 296
               H  Y        N         P  + +     +                      
Sbjct: 508 HAVLHLYYARFMNHFLNNCGLSPTSEPFSRLLVQGMVMGRSYRLKGSGRYVREEEVEVVN 567

Query: 297 ---------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                          +   EK+SKS  N ++P E+ ++ G D  R  ++ ++A      +
Sbjct: 568 AKKNQALLKETKEPVVMTWEKMSKSKQNGVEPGEMFDQYGTDTTRLIILADVAPTSHRNW 627

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
                   +N      +   +    +   +    +  +   F   D  +    +  ++  
Sbjct: 628 SSATFPGILNW--QKRLWLTLQEFQAAREEASTEVDVSSEQFLAEDAKLFDARNFYVKGA 685

Query: 402 RENMQ-NQLIHRALAQVISL---VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             N +    +  A++++  L   +    ++              +RA             
Sbjct: 686 TFNYRHAHQLSVAISKMQGLTNSLRRTPKHIQRH------GKQFERALAAQ--------- 730

Query: 458 LAILLQAFVPKLANKIFD 475
             I+L    P  A++++ 
Sbjct: 731 -IIMLAPMAPHFASELWS 747


>gi|195953430|ref|YP_002121720.1| leucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933042|gb|ACG57742.1| leucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 599

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+     YP+ + H+GH     I D +AR  R++G +VL   G D  G     AA   
Sbjct: 26  KFYVLEMFPYPSGKIHMGHVRNYTIGDAIARIKRMEGHNVLHPMGWDAFGLPAENAAIKN 85

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +   ++  QN    R     L  SY  D  I T    ++   + ++ K+ +KG +Y+  
Sbjct: 86  NLRPDIWTYQNIDYMRAQLKSLGFSYDWDREIATCNPDYYKWNQWIFLKMYEKGVVYRKT 145

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
            +  +   D+    +++V  G            +   E   ++ +++ Y ++LL   E  
Sbjct: 146 ATVNWCPHDQTVLANEQVIDGK----CWRCGTLIVQKEIPSWYIKVTDYAERLLKDLELL 201

Query: 184 PEFILPIERRNEVISFVK 201
                      +     K
Sbjct: 202 EGKWPQKVIMQQRNWIGK 219


>gi|189083247|sp|A1R6X5|SYL_ARTAT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 842

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 51  SRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGFDVLHPIGWDSFGLPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            IS D    + T++  ++   + L+K+  ++G  Y
Sbjct: 111 IKRNAHPSEWTYANIDTQAASFKRYAISADWSRRLHTSDPEYYRWTQWLFKRFYERGLAY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D     +++V  GA          PV       ++F+++ Y D+LL   
Sbjct: 171 RKDSPVNWCPKDLTVLANEQVVNGA----CERCGTPVTKKSLNQWYFKITDYADRLLED- 225

Query: 181 ESHPEFILPIERRNEVISF 199
               +   P        ++
Sbjct: 226 MDQLQGHWPERVLAMQRNW 244



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 111/301 (36%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFW-PADLHV 262
            ++ +  + G     D    M  ++D  + Y       D      D  K   W P   +V
Sbjct: 503 WVNVECPNCGRAAQRDTD-TMDTFVD-SSWYFLRFVSPDYTEGPFDPEKINNWMPVGQYV 560

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F         + AN P    + + G +L+ G+ +SKSLGN +D  
Sbjct: 561 GGVEHAILHLLYARFFTKVIKDIGLIEANEPF-SALLNQGQVLNGGKAMSKSLGNGVDLG 619

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E +++ GVDA+R  +V       D   D   +    +A         ++R+  +     D
Sbjct: 620 EQLDKFGVDAVRLTMVFASPPEDDV--DWADVSPSGSAKF-------LARAWRL---GQD 667

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                       D ++ +V  + + +  E + N   +  +A+++ LV+            
Sbjct: 668 VSSEPGVDPATGDRALRTVTHKTIADAAELLDNNKFNVVVARLMELVNAT---------- 717

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
             +KT    A        E +  +A++L  F P  A  +++ L       N  +   D  
Sbjct: 718 --RKTIDSGAGAADPAVREAVEAVAVILSLFAPYTAEDLWNTLGHPASVANAGWPKHDDA 775

Query: 493 L 493
           L
Sbjct: 776 L 776


>gi|304320514|ref|YP_003854157.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299416|gb|ADM09015.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 864

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 73/199 (36%), Gaps = 6/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI     YP+ + HIGH     + DVLAR+ R  G DVL   G D  G     AA
Sbjct: 30  DRPKSYILEMFPYPSGKIHIGHVRNYAMGDVLARYKRAKGYDVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N     D    +   + +D    T +  ++   + L+ +    G + 
Sbjct: 90  MATGKHPAEWTYANIAVMTDQLKRMGLGLDWDRSFATCDVDYYGHQQQLFLEFLAAGFLD 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G           PV+      + F+++   D LL   
Sbjct: 150 RQEAQVNWDPVDQTVLANEQVIDGKG----WRSGAPVERRTLNQWVFKITHRADDLLEAL 205

Query: 181 ESHPEFILPIERRNEVISF 199
           +       P   +    ++
Sbjct: 206 DDGRLDGWPAHVKEMQRNW 224



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 126/384 (32%), Gaps = 80/384 (20%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
             G   Q Y     PV      G      A     L           P     E  + + 
Sbjct: 431 NWGLSRQRYWGCPIPVIHCPSCGLVPVPKAQLPVRLPDV--------PAAIFAEPGNPLD 482

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-P 257
             +          + G     +    M  ++D  + Y        +       +A  W P
Sbjct: 483 KDVCAEWREVACPECGTAAQRETD-TMDTFVD-SSWYFARFASQPDDRPVAPEEAAAWLP 540

Query: 258 ADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKG--------- 300
            D ++ G +    H +Y   F         L  + P  + +F+ G + H+          
Sbjct: 541 VDHYIGGIEHAILHLLYARYFARNMKDLGYLDTDEPF-RNLFTQGMVTHETYRDVDGGWV 599

Query: 301 --------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                                     EK+SKS  NV+DP+ + +  G DA ++F++ +  
Sbjct: 600 APEDVDKQGDMARHRKTGEPITIGSIEKMSKSKKNVVDPMGMADSYGADATKFFVLSDSP 659

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  + + G++    A  A  + +L SR   ++L+  +         +  +  +    
Sbjct: 660 PERDVEWTESGVEGA--ARFAGRVYDLASRYEGVLLRATEQP-------SAGEAPLRRAV 710

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              +  + +++ +   ++A+A++  L+  + +   A  P  L                E 
Sbjct: 711 HSAIVGVSDDIDHFRFNKAIARLYELLGAL-KSLTAASPENLA------------TAAEA 757

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +   + LL  F+P LA + + ++ 
Sbjct: 758 LSVFSRLLAPFMPHLAEECWSLIG 781


>gi|126464978|ref|YP_001040087.1| isoleucyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126013801|gb|ABN69179.1| Isoleucyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 1058

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 136/400 (34%), Gaps = 20/400 (5%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            W+  +         +    +   E   N+ +          +   + ++    + +   
Sbjct: 402 CWRCKTPIVMRATKQWVLRVTKLKEKLINEAKKVNWIPDWALDRMMHMLE--NLQDWVIS 459

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR-KTFDWGIKIPDDPQY- 226
              Y    L  +E      + +   NE+        K+L        +    I   P   
Sbjct: 460 RQRYWGTPLPIWECPEGHRIVVGSINELEKHGGKKPKELHRPWIDEVEIKCPICGRPMKR 519

Query: 227 ---IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
              +M VW D+  ++    G+ +            D  V G D +   F ++     L  
Sbjct: 520 VPDVMDVWFDSAISFYAANGHPEKLRLEDVIL---DFIVEGHDQIRGWFFSLLRAGVLGF 576

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    +     +   G ++ KSLGN +   E IE  G D LR+++  +    +D  +
Sbjct: 577 QSKPYNTVLVHGFALDEHGREMHKSLGNYVGTDEAIERAGRDPLRFWV-SQNTVWEDLRF 635

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRV 397
              G+ + +  DL       V  S  M L  YD +      + E     D+ +LS  + +
Sbjct: 636 SWRGIDE-IRRDLGIAWNTFVFASTYMNLDKYDPLQHRIDDYKEFLRYEDKWLLSRINSI 694

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++I E+++   IH A  ++   + E     Y    +P    + N         V   V+
Sbjct: 695 AKKITESLEKYYIHEAARELRKFIVEDVSHWYIRLIRPRVWVEENTPDKLAAYSVLYYVL 754

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +   ++  F P LA KI+  +F         S+     P
Sbjct: 755 EKWLRMMAPFTPFLAEKIYQEVFRKANPELPLSIHLLDWP 794



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 21/172 (12%)

Query: 13  IAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------ 65
             YP+   PHIG A+   + D++ R+ R+ G +V    G D HG  I    +        
Sbjct: 50  PPYPSGDVPHIGTAWNKTLKDIVLRYKRMRGYNVFDRPGYDCHGLPIEVKVEQKLGVKVK 109

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWK 111
                           K  V  N ++       L +  D      T    + +    L K
Sbjct: 110 REIEEKIGVDKFVNECKKLVFNNIKSLTKWFKELGVFMDWENPYLTLRDEYIEAGWWLIK 169

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           K +++G + +     ++  R      + EV              PV+  E+E
Sbjct: 170 KAAEQGLLDREERVVYWCPRCSTTLAEYEVEYKVLTDPSIYVKFPVRSREKE 221


>gi|34541247|ref|NP_905726.1| isoleucyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417092|sp|Q7MUD3|SYI_PORGI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34397563|gb|AAQ66625.1| isoleucyl-tRNA synthetase, putative [Porphyromonas gingivalis W83]
          Length = 1137

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/435 (15%), Positives = 135/435 (31%), Gaps = 11/435 (2%)

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTEKRHHDTCRILWKKISDK 116
           +    QN     +         +R    VL    D  FIRTT  +              +
Sbjct: 441 VMLKMQNRVFRIEKMTHNYPHCWRTDKPVLYYPLDSWFIRTTACKEEMIANNGKIYWKPE 500

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                       +L+D                        +     E  +  +     K 
Sbjct: 501 STGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDGSEEICIGSVEELYNEIEK-AVKA 559

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
                +      P     E  + +      +         G  +  +   ++ VW D+  
Sbjct: 560 GMMERNPWAGFKPGVYTEENYAKIDLHRPFVDGITLCSPSGQPMRRELD-LIDVWFDSGA 618

Query: 237 NYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
                  Y             +PAD    G D     F  ++  A ++S        V +
Sbjct: 619 MPYAQMHYPFENRERVEDGSVFPADFIAEGVDQTRGWFFTLHAIATMISGTSSFKVVVSN 678

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  KG K+SK LGN +DP E I++ G D LR++++   +   +  +D DG+++    
Sbjct: 679 GLVLDKKGNKMSKRLGNAVDPFETIKKYGSDPLRWYMITNSSPWDNLKFDTDGVEEVRRK 738

Query: 353 DLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                       ++   L  +  +          E D  ILS  + +++E+ + + +   
Sbjct: 739 FFGTLYNTYQFFALYANLDGFTGEEESIPFAKRPEIDRWILSELNTLIREVDDQLSDYEP 798

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            RA   +   VSE   + Y    +         +   +        +  ++ L+    P 
Sbjct: 799 TRAGRAISDFVSENLSNWYVRLSRRRFWAGDMTEDKLSAYQTLYTSLLTVSKLMAPISPF 858

Query: 469 LANKIFDILFVADEN 483
            A++++  L   DE+
Sbjct: 859 YADRLYRDLTGKDES 873



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 24/191 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D + R+  + G  V    G D HG  +    + +   TK  
Sbjct: 49  PPSANGMPGIHHVMARAIKDTICRYKTMKGFRVDRKAGWDTHGLPVELGVEKSLGITKED 108

Query: 73  V-----------------DQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKI 113
           +                  + ++ + D+   +    D      T + R+ +T   L  ++
Sbjct: 109 IGKSISVEEYNAACRRDVMKFTKEWEDLTHKMGYWVDMEHPYITYDNRYIETLWWLLAEL 168

Query: 114 SDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
             KG +YKG     YS            N    Y+        AQ   +    E      
Sbjct: 169 YKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCVAQFKIMDPKPEMQLHGD 228

Query: 169 LSAYQDKLLSY 179
                     +
Sbjct: 229 AFFLAWTTTPW 239


>gi|297180539|gb|ADI16751.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_11B23]
          Length = 658

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 86/224 (38%), Gaps = 6/224 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  + + YP+   H+GH     I D ++R+ +L G +VL   G D  G     A
Sbjct: 30  TTKPKYYCLSMLPYPSGNLHMGHVRNYSIGDAVSRYKKLKGFNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  V  + + +QN  + ++  + L  +YD    I T+++ ++   + L+ K  +KG  
Sbjct: 90  AIDKKVHPQEWTEQNINHMKEQLNSLGFAYDWTKEINTSDESYYKFEQELFLKFYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  E E +F +++ Y D+L   
Sbjct: 150 YRKKSLVNWDPVDMTVLANEQVIDGKG----WRTGAEVELKEIETWFLKITDYADELEEG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            E           +   I   +         +           D
Sbjct: 206 LEKIDWPENVKNMQKNWIGKSRGTEISFETDKGNLLKAFTTRPD 249



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 104/306 (33%), Gaps = 39/306 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +  +    K         + E  +       G   Q Y     P+++ + E +  + 
Sbjct: 378 FNGLPSQEAFEKISEKLIALKKGEILFQYRLRDWGISRQRYWGCPIPMEYKDGETFTAKE 437

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                        + +       +NE   +   G +  + +  TF               
Sbjct: 438 LP------VLLPVNADGTYKPLHQNEGFRYKSDGYERETDTFDTFM-------------- 477

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY-------WPAFLLSA 282
                   Y +     +  D +   + P DL++ G +    H +Y            +  
Sbjct: 478 ESSWYFARYTSAQNKNEIFDKNTEYWLPVDLYIGGVEHAILHLLYSRFFYKVLRDMGMVK 537

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           N    KK+ + G +L  G K+SKS GN +DP E IE  G D++R F++      +   + 
Sbjct: 538 NDEPFKKLLTQGMVLKDGAKMSKSKGNTVDPKEYIENYGADSIRTFMIFASPPEQSLEWS 597

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +GL+         G    + R  ++  K          AF  S++++   C+ +  +I 
Sbjct: 598 DNGLE---------GCHKFLKRLWALSFK---ISSLGSDAFVGSEKTLNDECTDLFIKIH 645

Query: 403 ENMQNQ 408
           ++   +
Sbjct: 646 DDPDKR 651


>gi|254514076|ref|ZP_05126137.1| valyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676319|gb|EED32684.1| valyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 921

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 136/392 (34%), Gaps = 79/392 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++    A     ++  ES     +P +  N   ++++  ++D  +SR+   W
Sbjct: 348 IEPYLTQQWYVDAKALAGPAIAAVESGQIEFVPKQWENTYFAWMRD-IQDWCISRQ-LWW 405

Query: 217 GIKIP------------------------------DDPQYIMYVWIDALTNYLTTTGYLD 246
           G +IP                                 + ++  W  +     +T G+  
Sbjct: 406 GHRIPAWFDAQGNIYVGTDEAAVRAEHGLDETLPLHQDEDVLDTWFSSALWTFSTLGWPQ 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + +  +    P  + V G DI+ F    +      L   +P  +          +G+K+S
Sbjct: 466 DTEMLQRYH-PTSVLVTGFDIIFFWVARMIMMTLHLRGEVPFKQVYVHGLVRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGIDLHSLIEKRTSGLMQPQQAQRIREATQRQFPDGINAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTE 385
                 A G+D  +D   ++     +  N I N  +R V M  +  D  +    P     
Sbjct: 585 TFYSLAATGRDIKFDIGRIEG--FRNFCNKIWN-AARYVLMNCEGQDCGLDAELPVTLGP 641

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           S+  I S   RVL+ +R++M +     A   +   +     D Y +  K     +++P  
Sbjct: 642 SERWIESELQRVLERLRKSMSSYRFDLASQGLYDFIWNEYCDWYLELSKVSLRDESDPAA 701

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           A       +  + Q    L   +P +  +I+ 
Sbjct: 702 ARGTRRTLIRTLEQSLRALHPLMPYITEEIWQ 733



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH ++  I D L R+HR+ G D L+  GTD  G       + 
Sbjct: 31  EPYCIMIPPPNVTGSLHMGHGFQETIIDALVRYHRMAGYDTLWQVGTDHAGIATQMIVER 90

Query: 65  AGVTT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              K++  +       ++  R +    D S + F  T ++    
Sbjct: 91  QLAAEGKDRHEIGRDAFIDKIWDWKASSGGTITQQLRRLGASPDWSRERF--TMDEGLSQ 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             +  + ++  +G IY+G     +        +D EV    +         P+
Sbjct: 149 AVQETFIRLYREGLIYRGQRLVNWDPALHTAISDLEVVSEEEQGKLWHLRYPL 201


>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511506|sp|C5CHA1|SYI_KOSOT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 921

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 128/378 (33%), Gaps = 25/378 (6%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E    +     G +      Q  P  W       + +     +     ES  +  +    
Sbjct: 422 EIEKTEWHPSWGQNRITAMVQDRP-DWCISRQRSWGIPIPAFRCQDCGESILDGKVIDHF 480

Query: 193 RNEVISFVKSGLKDLSLS------RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
              V         + S S            G K     + I+ VW+D+ +++      + 
Sbjct: 481 AGIVEEKGTDVWFEWSESDLLPEGYTCPKCGSKNLKKQEDILDVWVDSGSSFEAVVKVM- 539

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                    +PAD+++ G D     F +    +       P    +        +G K+S
Sbjct: 540 -----DELRFPADVYIEGSDQHRGWFQSSLLLSVGTEGVAPFKSVITHGFINDEQGRKMS 594

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN +DP E+  + G + LR ++       +D     + +++++       I N +  
Sbjct: 595 KSLGNAVDPQEINNKYGAEILRLWVASSNYQ-EDIRISMNIIQQQIEN--YKKIRNTLRY 651

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--S 422
            +  +               E D+  +    ++++++         ++    ++  +   
Sbjct: 652 LLGNLSDYSPQDSVPYEELLELDKWAIMKLHKLIRDVTRYYDRYEFYKVFQSILKFIITD 711

Query: 423 EVDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               Y D  K   +   KT+P+R  +   V  E++  L  +L   +   + +++  L   
Sbjct: 712 MSAFYLDIIKDRLYVEGKTSPER-RSAQTVLFEILVALNKMLAPILTFTSEEVYAHL--P 768

Query: 481 DENRCFQSLDQRLKPGFM 498
           +  R ++++     P + 
Sbjct: 769 EAARNYKTIQVENWPEYK 786



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 15/158 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             +     Y N   H+G A   I+ D + ++  + G +  +  G D HG  I     +  
Sbjct: 50  FVLHDGPPYANGNIHVGTALNKILKDFIIKYKTMQGYNAPYIPGWDTHGLPIEHRVASEL 109

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWK 111
                           + + ++  +  R+    L +  D      T + ++  +   +  
Sbjct: 110 GEKAKELSKSTIRKKCRKYAEKYVKIQREQFKRLGVRGDWENPYLTFDPKYEASVLKVLS 169

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           K+   G++Y+     ++    E    + EV       Y
Sbjct: 170 KLVKSGNVYRTLKPIYWCTSCETALAEAEVEYHDHKSY 207


>gi|320330524|gb|EFW86503.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330873687|gb|EGH07836.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 868

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L  ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLLTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISAKLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A T+  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGASTGLDIAALTDDQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P     T  DRA    
Sbjct: 709 IRRSIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAPQV---TPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LLQEGLETVTLLLAPITPHISHELWTQLGHNE 788


>gi|160871699|ref|ZP_02061831.1| valyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120498|gb|EDP45836.1| valyl-tRNA synthetase [Rickettsiella grylli]
          Length = 930

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 130/393 (33%), Gaps = 78/393 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +       +          +P   R   + +++  ++D  +SR+   W
Sbjct: 360 IEPYLTDQWFMSMQPLAQPAIDVIIQGKLDFIPPTWRKICLQWLE-NIEDWCISRQ-LWW 417

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I +  D Q                             ++  W  +      T G+  
Sbjct: 418 GHRIPVWYDEQGHAYVGQNEKSIRQHYSLRPDTRLKQDEDVLDTWFSSALWPFVTLGWPQ 477

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +       F+P ++ V G DI+ F    +       +  +P      +       G+K+S
Sbjct: 478 STP-EFKLFYPTNVLVTGFDIIFFWVARMLMLGLHFTHQVPFKAVYITGLIRDQDGQKMS 536

Query: 305 KSLGNVIDPIEV-------------------------------------IEEVGVDALRY 327
           KS GNV+DP++V                                     I  +G DALR+
Sbjct: 537 KSKGNVLDPLDVVEGIRVDDLVRKRTQGLLQPQMAQKIESATRQQFPKGIPSLGTDALRF 596

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
                 +  +D  +D    +     +  N + N  +R V M  K+ +    T       +
Sbjct: 597 TYCALASPTRDIRFDLKRTEG--YRNFCNKLWN-AARFVLMHTKNQNNFNFTHKLTLPIN 653

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
            +  S+    + E+  ++Q+         +   +     D Y +  KP     ++P+R  
Sbjct: 654 RAFSSLLQNCIAEMNTHVQDYRFDLMAHSIYEFIWNEYCDWYVELAKPILAHLSSPERQE 713

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           T++   +  +     LL   +P +  +I+  + 
Sbjct: 714 TLMC-LISFLEISLRLLHPLMPFITEEIWQAIG 745



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 18/170 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH +++ + DVL R+ R+ G +VL+  GTD  G       + 
Sbjct: 43  EPYCIVLPPPNVTGSLHMGHGFQVTLMDVLVRYQRMCGKNVLWQGGTDHAGIATQMVVER 102

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
                              T   + +++     D    L   I +     T +       
Sbjct: 103 QLLAQGKSRHDLGRETFVSTIWDWKNKSGSRITDQLRYLGASIDWTRERFTQDTDFSAAV 162

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
             ++  +  +G IY+G     +        +D EV    +  +      P
Sbjct: 163 EKVFIDLYAQGLIYRGKRLVNWDPELLTAVSDLEVIHQEEKAHLWTIRYP 212


>gi|260891332|ref|ZP_05902595.1| leucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858715|gb|EEX73215.1| leucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 892

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 6/206 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+    AYP+ + H+GH     I D +AR+ ++ G +VL   G D  G     
Sbjct: 30  VEGKENYYVLEMFAYPSGKLHVGHLRNYAIGDAIARYKKMKGFNVLHPFGWDSFGLPAEN 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA + G     +   N  N R    ++ +SYD    + T    ++   +  + ++  KG 
Sbjct: 90  AAIDNGAHPGKWTKANIDNMRRQMKLMGLSYDWNRELSTYTPEYYKWNQKFFIEMYKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +         +++V    DG+ +      V   E   ++F+++ Y ++LL 
Sbjct: 150 VYKKKSYVNWCPDCNTVLANEQV---EDGKCWRHGKTDVIQKELSQWYFKITEYAEELLQ 206

Query: 179 YYES-HPEFILPIERRNEVISFVKSG 203
            +E     +   +    +      +G
Sbjct: 207 GHEELRGHWPEQVLTMQKNWIGKSTG 232



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+++E G D+ R F +      K+  ++ +GL         N +  
Sbjct: 635 EKMSKSKNNGVDPEEIVKEYGADSSRVFTLFAAPPEKELEWNMNGLAGAYR--FINRLYL 692

Query: 361 LVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQ 416
           L+  +     K+    D       A +E D+ I     + ++++ +++++    + A+A 
Sbjct: 693 LILSTADFADKNATKEDNYGINLDARSERDKEIQKKLHQTVKKVTDSIEDDFHFNTAIAA 752

Query: 417 VISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++ L++++  Y    K   + K +    +  V +   EV+ ++ +L+  F P +A++++ 
Sbjct: 753 IMELLNDMTTY----KQNVIDKNDISSESKKVWH---EVLEKVLLLIAPFAPHVADELWS 805

Query: 476 ILF--VADENRCFQSLDQRLK 494
            L        + + S D++L 
Sbjct: 806 DLGNTTLTFEQEWPSFDEKLT 826


>gi|283954345|ref|ZP_06371866.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794144|gb|EFC32892.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 746

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 76/413 (18%), Positives = 142/413 (34%), Gaps = 52/413 (12%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 203 FIEKIEEHNNQVGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 261

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  LKD  +SR+   WG +I                               + ++
Sbjct: 262 FNAWMKD-LKDWCISRQ-LWWGHQIPVYYCECLHEWASQNTPKSCPKCQSQNFKQDEDVL 319

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 320 DTWFSSGLWAMSTLGWGNENWGKDKIWSKNDLKDFYPNSLLITGFDILFFWVARMMFQST 379

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 380 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSTDILRFTLALLAIQGRD 439

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D         +E  + I       +
Sbjct: 440 IKLSNDKLLQVRN--FTNKIYNAANYLLLNESKFEDLENIALQ--SELAKYIYVKFQTCV 495

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 496 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 547

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
             LL  F+P ++  ++  L   D       +  +        K  + IF   +
Sbjct: 548 LKLLNPFMPFISEYLYHKLSNTDLKTSPSIMISKYPKFKEQDKNIEKIFSLLI 600


>gi|221195813|ref|ZP_03568866.1| leucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184287|gb|EEE16681.1| leucyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 859

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 74/202 (36%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 47  RPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGYDVLHPMGFDAFGLPAENAAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                  V+  +N          +  +Y  D    T +  ++   + ++ K+ +KG +Y+
Sbjct: 107 KHNTQPSVWTHKNIDQAVKTMFRMGFAYDKDRMFNTCDPEYYKWGQWIFLKMYEKGLVYR 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G             +  E   ++ R++ Y  +LL    
Sbjct: 167 ATSPVNWCPNDKTVLANEQVVNG----RCWRCGAVPEKRELSQWYLRITDYAQELLDDLN 222

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++           G
Sbjct: 223 QLDGWPERVKAMQANWIGRSEG 244



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 103/335 (30%), Gaps = 37/335 (11%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL----KDLSLSRKTFD 215
                +      Y    +          +P+      +             L+  ++ ++
Sbjct: 455 FRLRDWLISRQRYWGNPIPMIHCDHCGDVPVPYDELPVKLPDDLDLSAGDTLAECKEFYE 514

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKFWPADLHVIGKDI 267
                   P + +   +D  T          +P   +         ++ P D ++ G + 
Sbjct: 515 TICPTCGRPAHRITDTMDTFTCSSWYYLRYCDPHNEELPFSKESVDRWMPVDNYIGGIEH 574

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y   F        ++  + P    +         G+ +SKS GNV+ P  VIE 
Sbjct: 575 AILHLLYSRFFTKVLRDLGMIGIDEPFKNLLTQGMVKDEHGDTMSKSKGNVVPPSSVIEP 634

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
            G D +R  ++      KD  +D+  +        AN       R V  + K  D     
Sbjct: 635 YGADTMRLAILFVAPPEKDFDWDEKAVAG------ANRFIKRAWRIVWELTKTADASATL 688

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
            P     +  ++      +             + A++ ++ L++ V  Y +         
Sbjct: 689 DPTTLDAASAALNRELHALGLRCTHEFDEGQFNTAISAIMELINAVSSYLNDVA------ 742

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              +R+  + Y    V   +  +L   +P  A ++
Sbjct: 743 -ESERSQALCY---RVASDIVAMLAPIIPHWAEEL 773


>gi|302185150|ref|ZP_07261823.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 868

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 116/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A ++  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGPSTGLDVAALSDEQKA 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA    
Sbjct: 709 IRRAIHQAIRQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QDTPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  +A+LL    P ++++++  L   +
Sbjct: 757 -LMQEGVETVALLLAPITPHISHELWKQLGHNE 788


>gi|157374147|ref|YP_001472747.1| valyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157316521|gb|ABV35619.1| valyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 971

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 70/416 (16%), Positives = 132/416 (31%), Gaps = 103/416 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   ++     +P +  N + +     + D  +SR+   W
Sbjct: 374 IEPLLTDQWYVSVAPMAKTAMEAVDNGDIKFVPQQYEN-MYNSWMRDINDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 432 GHRIPAWYDEAGKVYVGRDESEVRAKHKLDDSVVLRQDNDVLDTWFSSALWTFSTLGWPK 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NTEELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPKLAAKIEKSTRKEFSEGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM------------- 368
            DALR+ L    + G+D  +D   L         N I N  SR V M             
Sbjct: 611 TDALRFTLASMASTGRDINWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQVEDAADDA 667

Query: 369 ILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           I +  D         P     + +D  I+ + +  ++   E+M+N     A   +     
Sbjct: 668 IGEALDCGQILVDGKPGEMELSLADRWIIGLFNETVKAYDEHMENYRFDLAANTIYEFTW 727

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP  ++     +     +  V V+ ++  L+   +P L   I+  
Sbjct: 728 NQFCDWYLELTKP-VMQSGTEAQLRGTRHTLVTVLEKMQRLMHPMMPYLTETIWKR 782



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T ++  
Sbjct: 90  VERKVAAEEGLNRHDLGREKFIDRIWDWKNESGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +        +D EV              P+
Sbjct: 150 SEAVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|72382161|ref|YP_291516.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123732640|sp|Q46L15|SYL_PROMT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72002011|gb|AAZ57813.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 862

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 5/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +    Y  +   YP+   H+GH    +I DVLAR+ R+ G +VL   G D  G     
Sbjct: 38  VNKENTFYALSMFPYPSGSLHMGHVRNYVITDVLARYKRMKGFNVLHPMGWDSFGLPAEN 97

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    ++   + D+N    +D  D L +S D    + T ++ ++   + ++ ++     
Sbjct: 98  AAIEREISPSTWTDKNISQMKDQLDRLGLSIDWSKEVTTCKEEYYKWTQYIFNQLHKNNL 157

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V          A+   V+  E   +F R++++ + L  
Sbjct: 158 AYQKKATVNWDPIDQTVLANEQVDAEGKSWRSGAK---VEKKELNQWFLRITSFAEDLNK 214

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++   +    +       G
Sbjct: 215 DLIKLNDWPDRVRVMQKNWIGKSIG 239



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 76/192 (39%), Gaps = 20/192 (10%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   I    EK+SKS  N +DP  VI++ G D  R F++ +    KD  +D   +
Sbjct: 609 PKDPLTGENIEIIYEKMSKSKYNGVDPSVVIDKYGADTARMFILFKAPPEKDLEWDDSDV 668

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +        +   V  +  +   +              DE  L + +  ++EI +++ 
Sbjct: 669 EGQYR--FIQRLWKFVINTFKLTNNN---SRSNIEKEKSKDEEALRLINIAIKEITDDLD 723

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           N   + A+++++ +V+ +    +      L K               VI  L  +   F 
Sbjct: 724 NLQFNTAISELMKVVNGLSLIVNYCSNETLNK---------------VISILVKITSPFS 768

Query: 467 PKLANKIFDILF 478
           P +A +++  + 
Sbjct: 769 PHIAEELWKTIG 780


>gi|310822829|ref|YP_003955187.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395901|gb|ADO73360.1| Leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 832

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI   + YP+ + H+GH    +I DV AR+ ++ G DVL   G D  G     AA  
Sbjct: 35  PKKYILEMLPYPSGKMHMGHVRNYLIGDVYARYFQMKGYDVLHPMGWDAFGLPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV   V   +N  +F++    L   YD    + T++  ++   +  + ++ ++G +Y+ 
Sbjct: 95  DGVHPAVRTQENITSFKEEIRSLGYCYDWAREVNTSQPEYYRWNQWFFIQMLERGLVYRR 154

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V  G          +PV   E   + FR++ Y   LL   ++
Sbjct: 155 FSKVNWCTGCLTVIANEQVKDGT----CERCDSPVLDKEMPEWAFRITKYSQVLLDGLDT 210

Query: 183 HPEFILPIERRNEVISFVKSG 203
             E+   I            G
Sbjct: 211 LKEWPERITSMQRNWIGRSEG 231



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 126/370 (34%), Gaps = 35/370 (9%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               +   G   Q Y     P+ + E+     R      + L       +    +  + E
Sbjct: 420 VTYRQKDWGFSRQRYWGTPIPIVYCEKCDPDRRGIPVPVEQLPVRLPEIDTQAVLTGKGE 479

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                 +   + +  R       +      ++   W      YL+        D ++A+ 
Sbjct: 480 PPLAKVASWVNTTCPRCGGPARREAETMDTFVDSCW--YFARYLSPRYAEAPFDAAEARR 537

Query: 256 W-PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKS 306
           W P D++V G +    H +Y+  +            + P+ + V         G K+SK 
Sbjct: 538 WLPVDVYVGGPEHAVMHLLYFRFWTRVMKELGLSPVDEPVKRLVTQGIVNGSDGRKMSKR 597

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+ P  ++++ G D  R +++      +D  +    ++         G    + R  
Sbjct: 598 WGNVVAPATIVKKYGADTARAYVMFAGPPERDFDWSDAQVE---------GAFRFLKRVW 648

Query: 367 SMILKDYDGM-IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           ++ +           G F      I     + L+ + E ++    + A+A ++       
Sbjct: 649 TLAVSHESVAGTVYTGPFEGKALEIRRAAHKCLKRVGEAIERLSFNTAIAGIME------ 702

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--N 483
            Y +A +     +T  ++A+       E IR LA++L  F P +A+++ +          
Sbjct: 703 -YLNALQALGTAETPAEKAA-----MAEAIRVLAVVLTPFTPHIADEVAEAYGAKAFTVQ 756

Query: 484 RCFQSLDQRL 493
             +   D  L
Sbjct: 757 EAWPDFDPAL 766


>gi|183235653|ref|XP_001914276.1| valyl tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|169800428|gb|EDS88947.1| valyl tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 675

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 82/495 (16%), Positives = 161/495 (32%), Gaps = 85/495 (17%)

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC--------RILWKKISDKGDI 119
           T     +  +   R    +++I  DD   T  +   +            + +K+ +KG  
Sbjct: 11  TPAHDPNDYNGAIRHKLKIINILNDD--GTMNQECGEFAGMKRFECREAVIEKLKEKGLY 68

Query: 120 YKGCYSGWYSLRDEAYYN--DDEVYKGADGQYYNAQHNPVQ----------WMEEEGYFF 167
                S          ++  +  +         N     V+            E E  ++
Sbjct: 69  KGVKASAMRVPICSRSHDIIEPRIKPQWWVNCKNMARRAVEAVRKGELKMYPSEMENVWY 128

Query: 168 RLSAYQDKLLSYYESHPEFILPIE--RRNEVISFVKSGLKDLSLSRKTFDW--------- 216
           R            +      +P    +  +     +  +K+  ++R   +          
Sbjct: 129 RWLENIHDWCISRQLWWGHRIPAYLIKSKKEKEADEFDMKNWVVARSEEEARKKAAEIKG 188

Query: 217 ----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
                I++  DP  ++  W  +     +  G+ +       K++P +L   G DI+ F  
Sbjct: 189 VNIEDIELKQDPD-VLDTWFSSGLFPFSVMGWPEQTK-DLEKYFPGELLETGNDIIFFWV 246

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------ 318
             +   +  L   LP  + +F       +G K+SKSLGN+IDPI+VIE            
Sbjct: 247 ARMVMMSLELMDCLPFKEVLFHSIVRDAQGRKMSKSLGNIIDPIDVIEGISLKGLNDKLY 306

Query: 319 -------------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                                    E G DA+R+ L+  +  G D   D + +      +
Sbjct: 307 TYNLPEKECVIAAEGQKKDFPNGIEECGTDAMRFALLAYMTQGHDINLDINRVVG--YRN 364

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIH 411
             N + N    S     KD+          T S  D+ IL   + ++  +++  ++    
Sbjct: 365 FCNKLWNAFKFSTMNFRKDFKAQETFEIKKTNSRLDQWILHRLNVMITSVQQWFKSYEFG 424

Query: 412 RALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            A   + S       D Y +A K    +  + +R      V   VI     +L  F+P +
Sbjct: 425 NATQAIYSFWLYDFCDVYLEASK-GIFRGPDNERRRAAEEVLYNVIEIGLRVLHPFMPFI 483

Query: 470 ANKIFDILFVADENR 484
             +++  L   ++  
Sbjct: 484 TEELWQRLPRRNDKE 498


>gi|116070546|ref|ZP_01467815.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
 gi|116065951|gb|EAU71708.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
          Length = 884

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +   +  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 57  SNKPGFFALSMFPYPSGSLHMGHVRNYVITDVIARVQRMRGDSVLHPMGWDAFGLPAENA 116

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    + D+N    RD  D L   I +D    T    ++   + L+ ++ D G  
Sbjct: 117 AIERNIDPGEWTDRNIDQMRDQLDRLGLSIDWDREQATCHSDYYRWTQWLFLELFDGGLA 176

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ADG+ + +    V+  +   +F R++ Y + LL+ 
Sbjct: 177 YRKNATVNWDPVDQTVLANEQV--DADGRSWRSGA-LVEQRQLNQWFLRITDYAEALLND 233

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 234 LDKLKGWPERVRTMQANWIGRSEG 257



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 21/207 (10%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P    +   +    EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   +
Sbjct: 628 PHDPTTGDKLEVLFEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADV 687

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM- 405
           + +        +  LV  + + +        P      E+D  +       +  + +++ 
Sbjct: 688 EGQFR--FLQRLWRLVESASTTLTNLNTTDCPENLTVQEAD--VRRALHLAIDAVSDDLN 743

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               ++ A+++++ L +             +  + PDR  +   +  E +  L  LL  F
Sbjct: 744 DEIQLNTAISELMKLSN------------TITSSGPDRLRS--PILQEALSGLIRLLAPF 789

Query: 466 VPKLANKIFDILFVADE--NRCFQSLD 490
            P +A + +  L        + + S+D
Sbjct: 790 APHIAEEFWSRLGGEGSVHQQSWPSVD 816


>gi|126661985|ref|ZP_01732984.1| valyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625364|gb|EAZ96053.1| valyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 875

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 129/364 (35%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +       +       E  L   R N   +   + ++D ++SR+   W
Sbjct: 349 IEPRLSDQWFLSMEELVKPAIKAVLESNEIKLYPSRFNNTYAHWLNNIRDWNISRQ-LWW 407

Query: 217 GIKIPD------DPQYI--------------------------------MYVWIDALTNY 238
           G +IP          ++                                +  W  +    
Sbjct: 408 GQQIPAYYFGDGKEDFVVAENIEKALELAKEKTRNPKLETRDLRQDADALDTWFSSWLWP 467

Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           +   G + NP+    K++ P +  V G DIL F    +    +  +   P      +   
Sbjct: 468 MAVFGGVLNPENEDFKYYYPTNDLVTGPDILFFWVARMIIAGYEYAGEKPFSNVYLTGLV 527

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +G K+SKSLGN  +P+ +IE+ G D +R  L+   + G D  +D++        +  
Sbjct: 528 RDKQGRKMSKSLGNSPEPLGLIEKFGADGVRVGLLLSASAGNDILFDEEL------CNQG 581

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            G  N +  +  +I       I  P +   + E   +   + L EI +N     +  AL 
Sbjct: 582 KGFSNKIWNAFKLIKGWEVADIAQPESSKVAIEWYEAKLQQTLAEIEDNFDKYRLSDALM 641

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  LV +     + +  KP   +  +           +E++     LL  F+P L  +I
Sbjct: 642 AIYKLVWDDFCSWFLEMIKPGYQQPID----RATFDKAIEMLEANLKLLHPFMPFLTEEI 697

Query: 474 FDIL 477
           +  +
Sbjct: 698 WHHI 701



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 48/159 (30%), Gaps = 20/159 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           R    I           H+GH     I DVL R  RL G +  +  GTD           
Sbjct: 32  RTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKVV 91

Query: 62  --------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHD 104
                          +        + D+      +    L  S D + R   T +     
Sbjct: 92  AKLKEEGINKNDLTREEFLKHAWEWTDKYGGTILEQLKQLGCSCD-WSRTKFTMDDDMSA 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    +  + +KG IY+G     +    +   +D+EV  
Sbjct: 151 SVIHSFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIF 189


>gi|91078378|ref|XP_974191.1| PREDICTED: similar to Leucyl-tRNA synthetase CG7479-PA [Tribolium
           castaneum]
 gi|270003885|gb|EFA00333.1| hypothetical protein TcasGA2_TC003172 [Tribolium castaneum]
          Length = 866

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 8/216 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R+K Y+ +   YP+   H+GH     I+DV+ARF R++G +V+   G D  G     AA 
Sbjct: 61  RDKYYVLSMFPYPSGSLHMGHVRVYTISDVIARFQRMNGKNVIHPIGWDAFGLPAENAAI 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  + +   N  + +     L  S++    + T +  ++   + L+ K+ D G +Y+
Sbjct: 121 ERQIAPQDWTQSNISHMKSQLQRLGCSFEWGRELATCDPSYYKWTQDLFLKLYDSGLVYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    D++V +        A+   V+      +F R + +   LL   +
Sbjct: 181 KKALVNWDPVDQTVLADEQVDENGCSWRSGAK---VEKKLLRQWFVRTTRFAKDLLEGLD 237

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                 L   R    +     G  D          G
Sbjct: 238 DPL---LQDWRDVIKLQKHWIGECDGVNFDFKVQGG 270



 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 123/398 (30%), Gaps = 96/398 (24%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD--- 223
           F  +           + P   LP+E     +S  + G   L       D           
Sbjct: 410 FWGTPIPVAHCDNCGAQPIRQLPVELPK--VSMSQKGGAYLKQVADWVDCTCPKCQQKAR 467

Query: 224 -PQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIY--WP 276
                M  ++D+   YL      +           K  P DL++ GK+    H  Y  + 
Sbjct: 468 RETDTMDTFVDSSWYYLRYLDSSNCQKMFDENKAKKMMPVDLYIGGKEHAVLHLYYARFI 527

Query: 277 AFLLSANLPLPKK----------VFSHGFILHKG-------------------------- 300
           +  L +   LP++          +        KG                          
Sbjct: 528 SHFLYSQGLLPEREPFKRLLVQGMVMGRSYRVKGTGRYVPESQVKVIDKKKNRAVIEATG 587

Query: 301 -------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                  EK+SKS  N +DP ++  E G D  R  ++ ++A      +         N++
Sbjct: 588 EAVVMGWEKMSKSKHNGVDPGDMFCEYGSDTTRLLILGDVAPTSHRNW---------NSN 638

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENM-QN 407
              GI N   R    I          P       F   D+ +    +  ++    N  ++
Sbjct: 639 TFPGILNWQKRLWMTIQDFLKHRKTPPPSIPDDQFKAHDDYMFDSRNYYIKGTTFNYCRS 698

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA---ILLQA 464
           Q    A+++   L + +      + P           +++   +++  R LA   ILL  
Sbjct: 699 QQHSVAISKQQGLTNSL-----RRVP-----------ASIFAKSLQFERALAAQIILLAP 742

Query: 465 FVPKLANKIF-------DILFVADENRCFQSLDQRLKP 495
             P  A++++       + L  + E    +++ ++  P
Sbjct: 743 MAPHFASELWSGFVSAPNRLNHSGEIDWEKTVLEQKWP 780


>gi|57167771|ref|ZP_00366911.1| valyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305432205|ref|ZP_07401369.1| valine--tRNA ligase [Campylobacter coli JV20]
 gi|57020893|gb|EAL57557.1| valyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304444748|gb|EFM37397.1| valine--tRNA ligase [Campylobacter coli JV20]
          Length = 870

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 72/415 (17%), Positives = 142/415 (34%), Gaps = 56/415 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + D          Y    +N V+    + +F +      + +           P    N 
Sbjct: 327 FIDKIEEHNNQVGYCYRCNNIVEPYISKQWFVKQEI-AKESIEKVALGESKFYPSHWVNS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+   +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRAWCISRQ-LWWGHQIPVYYCECSHEWASQDTPKACPKCGGQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGY--------LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+            +    +F+P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAISTLGWGNDTWGKDKIWFEEDLKEFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALGALPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  + +  + ++ +         + + + S     +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYN-ATNYLLLNEEQFEDLEKIELKSALA-QFVYSRFQDCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW--ELKKTNPDRASTVLYVTVEVIR 456
           + +REN+ N   + A   +         ++D    W  EL K   +    +      + +
Sbjct: 620 KNVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAQKESVKELGS----IFK 669

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPRFL 511
           +   LL  F+P ++  ++  L  ++       +  +       +   + IF   +
Sbjct: 670 EALKLLNPFMPFISEYLYHKLSKSELKTSASIMISKYPQFHAKNSNIEEIFSLII 724



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKNKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREKFIEKIWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLA 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKKLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|329910003|ref|ZP_08275186.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546321|gb|EGF31342.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 883

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 92/234 (39%), Gaps = 6/234 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K Y  + + YP+ + H+GH     I DV+ R  R++G +VL   G D  G     AA
Sbjct: 37  DKKKFYACSMLPYPSGKLHMGHVRNYTINDVMYRHLRMNGYNVLMPMGWDAFGMPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N  + +     +   I +   +   +  ++   + ++ K+ +KG +Y
Sbjct: 97  MANNVPPAQWTYANIAHMKQQMQAMGLAIDWSREMTACKPDYYKWNQWMFLKMLEKGIVY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K   +  +   D+    +++V  G            ++  E   Y+ R++ Y ++LL + 
Sbjct: 157 KKTGTVNWDPIDQTVLANEQVVDG----RGWRSGALIEKREIPMYYARITDYAEELLDHV 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
           ++         R  +     KS     + +    D    I D   ++     D 
Sbjct: 213 DNKLPGWPERVRTMQANWIGKSTGVRFAFTHTIADGETLIDDGKLWVFTTRPDT 266



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 119/358 (33%), Gaps = 38/358 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +G    + E + + D    G   +      +   +++   Y+ R  +           + 
Sbjct: 480 TGNPLNKHEKFLHVDCPACGKPARRETDTMD--TFVDSSWYYMRYCSPGSTESMVDTRND 537

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D+G+   D+P   +      L      T +
Sbjct: 538 YWMPMDQYIGGIEHAVMHLLYARFWTKVMRDFGLIKFDEPFTNLLTQGMVL----NETYF 593

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG--EK 302
            ++  G K  F P D+ +   D                  PL   + S G  ++ G  EK
Sbjct: 594 REDAAGKKTWFNPEDVALTLDD---------------KGRPLAATLKSDGAAVNIGGTEK 638

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N IDP   I+  G D  R F +      +   +   G++   N  L        
Sbjct: 639 MSKSKNNGIDPQAQIDLYGADTARLFTMFASPPEQTLEWSGTGVEG-ANRFLRRVWAFGF 697

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +++    ++    +      F ++  ++     ++LQ+   +++    +  ++  + +++
Sbjct: 698 AQAGR--IEKSAALKLVLADFGDAQRTLRREVHKILQQADHDIKRIQYNTVVSACMKMLN 755

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                        L+    D +     V  E       +L    P +   ++  L  A
Sbjct: 756 ------------TLEAAKLDDSKASDAVITEGFSVFLRVLYPIAPHITFTLWQQLGYA 801


>gi|156847411|ref|XP_001646590.1| hypothetical protein Kpol_1055p89 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117268|gb|EDO18732.1| hypothetical protein Kpol_1055p89 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 753

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           + +Y+ +   YP+   H+GH    +I+DVL RF++L+G +VL   G D  G     AA  
Sbjct: 62  KDIYVLSMFPYPSGTLHLGHLRVYVISDVLNRFYKLNGYNVLHPMGWDSFGLPAENAAIE 121

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +    +  QN    +D    +  +  +D  + T+   ++   + ++ ++  +G  Y+ 
Sbjct: 122 RRINPADWTIQNISKMKDQMKCMLANFDWDRELSTSSPEYYKFTQWIFLQLFKQGLAYRK 181

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V               V+    + +F  ++ ++ +L     S
Sbjct: 182 EAEINWDPIDQTVLANEQVDAE---GRSWRSGAIVEKKLLKQWFLGITKFEKQLNHDLNS 238

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   ++   +       G
Sbjct: 239 LTNWPTKVKAMQKHWLGESHG 259



 Score = 44.8 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N IDP + I + G DA R  ++ +        +D   +         N + 
Sbjct: 642 FEKMSKSKYNGIDPTKFIAKHGPDATRAHILFQAPIENILNWDSQKIVGIERW--LNKLI 699

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           NL ++     L  +D    TP   +  +    +    ++  I 
Sbjct: 700 NLTNQIT--ALASFDEKFSTPDVLSGPNAKFHNEFQTLVHSIT 740


>gi|50289171|ref|XP_447015.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526324|emb|CAG59948.1| unnamed protein product [Candida glabrata]
          Length = 907

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 84/204 (41%), Gaps = 5/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++  +YI +   YP+   H+GH    +I+D L RF++  G +V+   G D  G     AA
Sbjct: 66  DKRDMYILSMFPYPSGMLHMGHLRVYVISDTLNRFYQQRGYNVIHPMGWDAFGLPAENAA 125

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN +  ++  + +  + +++  + T +  ++   + L+ ++   G  Y
Sbjct: 126 IERGIDPSEWTKQNIKKMKEQMNDMLANFNWEREVTTCDPEYYKFTQWLFLQLYKNGLAY 185

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V               V+  +   +F  ++ + D+L    
Sbjct: 186 RKDAEINWDPVDKTVLANEQVDAN---GRSWRSGAIVEKKKLTQWFLGITKFVDQLRDDL 242

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +   E+   ++          +G+
Sbjct: 243 KYLEEWPNKVKTMQNNWIGSSTGM 266



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 20/212 (9%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           + K EK+SKS  N  DP E I + G DA R  ++ +        +D++ +         +
Sbjct: 652 ILKYEKMSKSKYNGADPNECISKHGPDATRAHILFQSPISDALRWDEEKIVGIERW--LD 709

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
            I  L     S   K        P  +   + ++ +  S+++  I ++  +N  ++  ++
Sbjct: 710 KILQLCMSFASNPDKIVGMTGIPPDQYNTDEITLYNNVSKMVNSITKSFSENLSLNTVIS 769

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK--- 472
             + L + +          E  K N     TV   T+  +R L   +   VP +A +   
Sbjct: 770 DYMKLTTLL----------ENAKKNTKIRDTV---TINYVRDLIKCIYPVVPSIAEEASC 816

Query: 473 IFD-ILFVADENRCFQSLDQRLKPGFMLHKTF 503
           I    L V      + +  + +K   M  K F
Sbjct: 817 ILQTHLNVNVNIYEWPTAREVIKSSLMNLKIF 848


>gi|331005984|ref|ZP_08329329.1| Valyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330420229|gb|EGG94550.1| Valyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 780

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 136/398 (34%), Gaps = 89/398 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      ++ R     ++ +S  E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 207 IEPYLTNQWYVRTQPLAEEAISKVEDGSIKFVPNQYENMYFSWMRD-IQDWCISRQ-LWW 264

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +      T G+ +
Sbjct: 265 GHRIPAWYDESGKVYVGRSEADVREKNELGNDVILSQDEDVLDTWFSSGLWTFGTLGWPE 324

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KG 300
                     P+++ V G DI+ F    W A ++   L   K+V  H   +H       G
Sbjct: 325 KTPELDTFH-PSNVLVTGFDIIFF----WVARMIMLTLHFRKEVPFHTVYVHGLVRDSSG 379

Query: 301 EKISKSLGNVIDPIEVI-------------------------------------EEVGVD 323
           +K+SKS GNV+DPI++I                                        G D
Sbjct: 380 QKMSKSKGNVLDPIDLIDGIDLESLVTKRTTGLMNPKAASKIEKSTRKEFADGINPYGTD 439

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTPGA 382
           ALRY      + G+D  +D   ++     +  N I N  +R V M  ++ D  +      
Sbjct: 440 ALRYTYYSLASTGRDINFDIGRIEG--YRNFCNKIWN-AARYVLMNCEEQDCGVNGEAVE 496

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
            + +D  I+S   +  + + E +    +  A   +   +     D Y +  KP  L   N
Sbjct: 497 LSLADRWIISRLQQAEEAVEEGLNTYRLDLASQALYDFIWNDYCDWYLELSKP-VLWDDN 555

Query: 441 --PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              ++        + V+     L    +P +  +I+  
Sbjct: 556 ASAEQQRGTRKTLIRVLEATLRLAHPLMPYITEEIWQR 593


>gi|86740130|ref|YP_480530.1| isoleucyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566992|gb|ABD10801.1| Isoleucyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 1069

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 69/415 (16%), Positives = 131/415 (31%), Gaps = 69/415 (16%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 +    H P+ +     ++ R +A +D+LL+   +      P   +         
Sbjct: 403 YTHSYPHCWRCHTPLIYYPLPSWYIRTTAIRDELLAQ--NERTTWHPERIKTGRYGEWLR 460

Query: 203 GLKDLSLSRKTFDWGIKIP-----DDPQY------------------------------- 226
           G  D +LSR    WG  +P     DDP +                               
Sbjct: 461 GNVDWALSRNR-YWGTPLPVWRCDDDPTHLVCVGSLAELSELAGRNLADLDPHRPFVDEV 519

Query: 227 ----------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                           ++ VW D+        G   +   +  + +PA       D    
Sbjct: 520 TGTCPTCGGASHRVPEVIDVWYDSGAMPFAQWGAPHHNLAAFTRQYPAQYICEAIDQTRG 579

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +     L+         +     +   G K+SK LGNV+DP E+ E  G DA+R+ 
Sbjct: 580 WFYTMMAVGTLVFGRSSYETVLCLGLLLDADGRKMSKHLGNVLDPFELFERHGADAVRWL 639

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--------DGMIPTP 380
           ++   +   D     + ++  V   L          ++      +        D     P
Sbjct: 640 MLAGGSPWADRRVSHEAIEDIVRKVLLTYWNTSSFFALYAGAAGWRPGADPAADPRATPP 699

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                 D   LS  +  + E+ + ++N    RA  ++   V ++  ++  +        +
Sbjct: 700 ARRHVLDRWALSELAATVAEVDDALENFDSLRAGRRIARFVDDLSNWYVRRSRRRFWAGD 759

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            D  ST+       +  L  ++  F P L + ++  LF     R   S+     P
Sbjct: 760 ADALSTLHT----CLDALTRVMAPFTPFLTDWLWSRLFADASPRTPDSVHLAAWP 810



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 23/154 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT- 69
               N +P  H  H    +  D+  R+  + G  V    G D HG  +  A +     T 
Sbjct: 55  PPTANGRPGAH--HVEARVFKDLFPRYRTMKGYHVPRRAGWDCHGLPVELAVEKELGFTS 112

Query: 70  ----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +  V ++  +F  M + +   +  D   RT +  + ++     K
Sbjct: 113 KNDIEAFGIAEFNARCRESVLRHVADFSAMTERMGYWVDLDGAYRTMDTSYVESVWWSLK 172

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           +I D+G + +      Y  RDE   +D EV +G 
Sbjct: 173 QIFDQGLLVEDFRVTPYCPRDETPLSDHEVSQGY 206


>gi|330895573|gb|EGH27881.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 868

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 115/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A ++  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGSSTGLDAAALSDEQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA    
Sbjct: 709 IRRAIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QDTPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LMQEGVETVTLLLAPITPHISHELWKQLGHNE 788


>gi|114769846|ref|ZP_01447456.1| leucyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549551|gb|EAU52433.1| leucyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 844

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 28  NREKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKSAVGFNVLHPMGWDAFGMPAENAA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +  QN  + R     + +S D      T +  ++   + ++  +  K  +Y
Sbjct: 88  MEKNVHPGDWTYQNIADMRAQLKPMGLSIDWSREFATCDPEYYGQQQAMFIDMMSKELVY 147

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y ++LLS  
Sbjct: 148 RKNAVVNWDPVDMTVLANEQVENGKG----WRSGALVERKELTQWFFKISEYSEELLSAL 203

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +S   +   +    +       GL+
Sbjct: 204 DSLENWPEKVRTMQKNWIGKSQGLQ 228



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 118/370 (31%), Gaps = 64/370 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G           +L    S      P++R  E  +    
Sbjct: 423 WGVSRQRYWGCPIPVIHCDKCGVVAEKKENLPIVLPKDVSFDSPGNPLDRHEEWRNCKCP 482

Query: 203 G----------------LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
                                  +R T         +     ++ +D     +       
Sbjct: 483 SCGSAALRETDTMDTFVDSSWYYARFTAPESTTPTSEKDANYWMNVDQYIGGVEHAILHL 542

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP----------KKVFSHGFI 296
                 A+   A  H+  K I  F+A++    +  A    P          K+  +  +I
Sbjct: 543 LYSRFFARAMNATGHLPKKAIEPFNALFTQGMVCHATYQDPGGKWLNPDDIKQSENGEYI 602

Query: 297 LHKGEK--------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              G+K        +SKS  NV+DP ++I++ G D  R+F++ +    +D  +   G + 
Sbjct: 603 TLDGQKVTVGQSIKMSKSKKNVVDPDDIIDQYGADTARWFVMSDSPPERDVEWTASGAEA 662

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
                        + R   + ++  +          E D++     +  +  +   ++  
Sbjct: 663 A---------WKHLQRVWRLTVEIIEDQTTDTSKDVELDKA----RNIAIDAVTNGVEGF 709

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             ++++A +    +             + K++  + + V  +       +A L+Q   P 
Sbjct: 710 AFNKSIAALYQFTN------------IISKSSASKIAKVNAML-----TMAQLMQPMTPH 752

Query: 469 LANKIFDILF 478
           LA +I+  L 
Sbjct: 753 LAEEIWSTLG 762


>gi|89097578|ref|ZP_01170467.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89087874|gb|EAR66986.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 1021

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 58/386 (15%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 +     +P+ +   + +F + S+ ++K L           P   +N        
Sbjct: 374 YEHSYPFCWRCDSPLLYYAADSWFIKTSSLKEKFLELNSQAEWH--PSHMKNGRFGNFLE 431

Query: 203 GLKDLSLSRKTFDWGIKI------------------------------------------ 220
           GL D ++SR    WG  +                                          
Sbjct: 432 GLVDWNISRSR-YWGTPLNVWVCENCGAEKAPKSFQELQELSEANGKLTDYHKPYVDAVK 490

Query: 221 --PDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
               D          ++ VW D+ +       Y        ++ +PAD  + G D     
Sbjct: 491 IPCQDCDGYMARTPEVIDVWFDSGSMPYAQLHYPFEHKEEFSRLFPADAVIEGVDQTRGW 550

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+++   + L    LP    +     +   G+K+SKS GN +DP ++I E G DALR+ L
Sbjct: 551 FYSLLAVSVLYKGQLPYKNVLALEHVLDENGQKMSKSKGNALDPAKLITEFGADALRWAL 610

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           V + +  K   +      +   + L + + ++          D+     +  +    D  
Sbjct: 611 VEDSSPWKPKKFSGKNAAEAK-SKLVDSLASIHHFYSLYSTIDHFEPDSSQTSGNIMDRW 669

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           ILS    V++ + + M +     A     +L+ EV + Y    +     K   D   +  
Sbjct: 670 ILSRLHSVIETVNKEMGSYQATNAARAAGTLIEEVSNWYIRRNRERFWAKGMEDDKISAF 729

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
                ++  ++ +L  FVP +A  ++
Sbjct: 730 QTLYTLLDNISRMLAPFVPFIAESVY 755



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R            N  PH GHA      D+ AR+  + G  V+   G D HG  +    
Sbjct: 30  GRTPFVFYEGPPTANGLPHAGHALGRTYKDLTARYWTMKGRQVIRKAGWDTHGLPVELGV 89

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           + A                     +  V Q  + +R+  + L      DD   T    + 
Sbjct: 90  EKALGISGKKEIEDYGVGAFIEKCRESVFQYEKQWREFTEQLGYWTDMDDPYMTLSNEYI 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   +   I +KG +YKG     Y    +   +  E  +G  
Sbjct: 150 ESVWHILGTIHEKGLLYKGHRVSPYCPSCQTSLSSHETAQGYK 192


>gi|116193723|ref|XP_001222674.1| hypothetical protein CHGG_06579 [Chaetomium globosum CBS 148.51]
 gi|88182492|gb|EAQ89960.1| hypothetical protein CHGG_06579 [Chaetomium globosum CBS 148.51]
          Length = 1058

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 130/421 (30%), Gaps = 93/421 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                + ++      ++ R++   D  L   E     I P   R +      + + D  +
Sbjct: 451 CEKTKDVIEPYMTPQWWVRMNEMADAALKVVEEGKVKISPESAR-KSYDRWLANVNDWCI 509

Query: 210 SRKTFDWGIKIP---------------------------------------------DDP 224
           SR+   WG +IP                                              DP
Sbjct: 510 SRQ-LWWGHRIPAYRVILEEEEGERETDKSPWVVGRTPEEAQAKAAAKYAGKKYRLEQDP 568

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
              +  W  +    ++  G+ +        F+P  +   G DIL F    +   +  L+ 
Sbjct: 569 D-CLDTWFSSGLWPMSILGWPNTESSDFKNFFPTSMLETGWDILFFWVIRMIMLSLKLTG 627

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------- 317
            +P  +          +G K+SKSLGNVIDP+++I                         
Sbjct: 628 EVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIINGIELEALHAKLLTGNLKEDEVERA 687

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DALR+ L+     G D  +D             N +       
Sbjct: 688 TKYQKTAFPGGIPECGADALRFTLLSYTTGGGDISFDIK--VMHAYRRFCNKVWQASKYV 745

Query: 366 VSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           +  + +D+         A +  +  IL   +  ++ I E ++ +    A         + 
Sbjct: 746 LGKLPQDFVPTSKLDTSALSVPERWILHRMNSAVKGINEALEARQFSTATKLAYQFFYDE 805

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             D + +  K   L    P++  +V       +     LL  F+P +  +++  L  + +
Sbjct: 806 LCDVFIENSK-GILSDGTPEQQQSVQQTLYRTLDVALRLLHPFLPFITEELWQRLPRSKD 864

Query: 483 N 483
           +
Sbjct: 865 D 865



 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 40/145 (27%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I           H GHA    + D L R+HR+ G   L+  G D  G       +  
Sbjct: 125 KFVIPLPPPNVTGALHCGHALANSLQDTLIRWHRMKGFSTLWVPGCDHAGISTQSVVEKM 184

Query: 66  GVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +   ++  S D      T  +      
Sbjct: 185 LWKKEKKTRLELGRENFTKLVWEWKGEYHERINNAQRLMGGSMDWTREAFTMNENLSAAT 244

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              + ++ D+G IY+      +   
Sbjct: 245 METFCRLHDEGYIYRSSRLVNWCTH 269


>gi|291276430|ref|YP_003516202.1| valyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963624|emb|CBG39456.1| valyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 877

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 130/400 (32%), Gaps = 64/400 (16%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E + +  E Y    G+ Y    N V+    + +F +    Q  +    E    F     +
Sbjct: 323 EGFIDHIEDYVNQIGKCYR-CGNVVEPYISKQWFVKKEIAQTSMQKVQEDLMHFYPKEWK 381

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGI------------------------------KIPD 222
            N   +     L+D  +SR+   WG                               KI  
Sbjct: 382 NN--YNAWMRELRDWCISRQ-LWWGHRIPVWYCEDCAGVFASREEMPKACKHCQSTKIFQ 438

Query: 223 DPQYIMYVWIDALTNYLTTTGYLD-------NPDGSKAKFWPADLHVIGKDILRFH--AI 273
           DP  ++  W  +     +T G+ +         +     F+P  L + G DIL F    +
Sbjct: 439 DPD-VLDTWFSSGLWAFSTLGWGNRGAEKEKYQERDLQDFYPNSLLITGFDILFFWVARM 497

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L   LP              G K+SKS GNVIDP+ +IE  G D LR+ L    
Sbjct: 498 VLSGESLLEELPFRDVYLHALVRDEFGNKMSKSKGNVIDPLSMIEAYGADNLRFSLALLC 557

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE----- 388
           A G+D       LK          + N V        +               D      
Sbjct: 558 AQGRDIKLSLKKLKDTQA--FLIKLENAVKFLELYAKQQEPNFTHFQDRENLGDYHTNLG 615

Query: 389 -SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
             + S  +   ++++E ++N   + A   + S +     D   +      L K       
Sbjct: 616 CYLKSQFNATSKKVQEELENYRFNDAAMSLYSFLWMEFCDWGIE------LAKVE----K 665

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           + ++    + +    LL  F+P +  KI+  L  +D   C
Sbjct: 666 SAVFELGSIFKDAMKLLHPFMPFVTEKIWHRLNHSDLRDC 705



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+ G   L+  G D  G      
Sbjct: 28  QKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMQGYRTLYQPGLDHAGIATQNI 87

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDI----SYDDFIRTTEKR 101
            +   ++                   + +++     +    L I    S   F  T +K 
Sbjct: 88  VEKQLLSQGIVKEDLGREEFIKKVWEWKEESGGKIIEQMYSLGITPAWSRARF--TMDKG 145

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             +  R  +    +KG I +G Y   +   D A  + +  Y+   G+ Y
Sbjct: 146 LANAVREAFVTWYEKGLIIQGDYMVNWCTHDGALSDIEVEYEENQGKLY 194


>gi|313157288|gb|EFR56713.1| isoleucine--tRNA ligase [Alistipes sp. HGB5]
          Length = 1133

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 106/267 (39%), Gaps = 11/267 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVIGKDIL--RFHAIYWPA 277
                 ++ VW D+         Y     G   K  +PAD    G D     F  ++  A
Sbjct: 595 MKRESDLIDVWFDSGAMPYAQLHYPFENGGEHFKTVYPADFIAEGVDQTRGWFFTLHAIA 654

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +L  ++     + +   +   G K+SK LGN +DP EV+   G DA R++++       
Sbjct: 655 SMLFDSVAFKNIISNGLVLDKNGNKMSKRLGNGVDPFEVLATYGADATRWYMISNSQPWD 714

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           +  +D+DG+ +                ++   +  + G  P        E D  I+S+ +
Sbjct: 715 NLKFDRDGVDEVRRKFFGTLYNTYSFFALYANVDGFTGREPEVPVEKRPEIDRWIISLLN 774

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVT 451
            +++++  ++++     A   +   V E   + Y   + ++ W     N D+ +      
Sbjct: 775 TLVRDVTRSLEDYDPTPAARAIQEFVGENLSNWYVRLNRKRFWG-GGMNEDKLAA-YQTL 832

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
              +  +++L   F P ++++IF  L 
Sbjct: 833 YTCLETVSMLAAPFAPFISDRIFCDLN 859



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------------- 59
               N  P I H     I DV  R+    G  V    G D HG  +              
Sbjct: 47  PPSANGTPGIHHVMARTIKDVFCRYKTQQGYLVHRKAGWDTHGLPVELGVEKKLGITKED 106

Query: 60  ----KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                  +    T +  V + +  + D+   +   ++ DD   T + ++ +T   L K++
Sbjct: 107 IGKKITIEEYNRTCREAVMEFTGMWEDLTRKMGYWVNMDDPYITYDNKYIETLWWLLKQL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG +YKG     YS       +  E+ +   
Sbjct: 167 FDKGLLYKGYTIQPYSPAAGTGLSTHELNQPGC 199


>gi|76788731|ref|YP_327817.1| isoleucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123731254|sp|Q3KN03|SYI_CHLTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76167261|gb|AAX50269.1| isoleucyl-tRNA synthetase, mupirocin resistant [Chlamydia
           trachomatis A/HAR-13]
          Length = 1036

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 4/264 (1%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y+   W D+         Y           +PAD    G D     F+ +   A  L   
Sbjct: 511 YVFDCWFDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQ 570

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYD 342
                 + +   +   G K+SK L N   P  +++  G DALR +L+  +    +D  + 
Sbjct: 571 PAFKNVIVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLLNSVVVKAEDLRFS 630

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++  +   L      L        L  +D          E D  ILS    ++ + R
Sbjct: 631 DKGVESVLKQVLLPLSNALAFYKTYAELYGFDPKETDNIELAEIDCWILSSLYSLVGKTR 690

Query: 403 ENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           E+M    +H A+   +  +    + Y    +       +            EV+   + +
Sbjct: 691 ESMSQYDLHAAVNPFVDFIEDLTNWYIRRSRRRFWDAEDSADRRAAFSTLYEVLVVFSKV 750

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           +  F+P +A  ++  L    +   
Sbjct: 751 IAPFIPFIAEDMYQQLRGETDPES 774



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 91/287 (31%), Gaps = 37/287 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I DV+ R+  +DG  V    G D HG  +    + +       
Sbjct: 45  PPFATGLPHYGHLLAGTIKDVVCRYASMDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPG 104

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++   D +   + +    RT +    ++   +++ +
Sbjct: 105 AIERFGVANFNEECRKIVFRYADEWKYFVDRIGRWVDFSATWRTMDLSFMESVWWVFRSL 164

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            D+G +Y+G     +S +     ++ E  +        +        + +G+    +   
Sbjct: 165 YDQGLVYEGTKVVPFSTKLGTPLSNFEAGQNYKEVDDPSVVIKFALQDNQGFLLAWTTTP 224

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             L+S         L   R  +  S  +  L   SL R            P    Y WI 
Sbjct: 225 WTLVSNMALAVHPELTYVRIKDKESGDEYILGQESLPR----------WFPDRESYEWIG 274

Query: 234 ALT-------NYLTTTGYLDNPDGSKA-KFWPADLHVIGKDILRFHA 272
            L+       +Y     Y  +    +A +  PAD     +     H 
Sbjct: 275 QLSGKSLVGQSYEPLFPYFQDKKELEAFRILPADFIEESEGTGIVHM 321


>gi|189218417|ref|YP_001939058.1| Leucyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189185275|gb|ACD82460.1| Leucyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 825

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 3/209 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH      +D++AR+ R+ G +VL   G D  G    +
Sbjct: 36  SSKPKFYVLDMFPYPSGSGLHVGHLEGYTASDIIARYKRMKGFNVLHPMGWDAFGLPAEQ 95

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +   QN  NF+     +  SYD    I TT+  ++   + ++ ++ +KG 
Sbjct: 96  HAILTGTHPALTTRQNIANFKRQIQAMGFSYDWSREINTTDPAYYKWTQWIFLRLFEKGL 155

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y      WY    +    ++E+    DG      ++PV       +F +++AY +KLL 
Sbjct: 156 AYVAEAPVWYCPNLKTVLANEEIIHTPDGPRSERGNHPVIRKPFRQWFLKITAYAEKLLE 215

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDL 207
             E         E +   I   +  L   
Sbjct: 216 GLEKVQWPESIKEMQRHWIGKSEGALIRF 244



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 48/279 (17%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----ADLHVIGKDILRFHAIY 274
           +I   PQ+    W      Y             K K+W      DL++ G +    H +Y
Sbjct: 496 EINTMPQWAGSCW--YYLRYCDPHNEKLPFSAEKEKYWMSPQGVDLYIGGAEHAVLHLLY 553

Query: 275 WPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              +              P  + V     +    +K+SKS GN+++P  +I+E G D LR
Sbjct: 554 ARFWHKVLYDIGLVSTPEPFYRLVNQGVILGEDNQKMSKSRGNIVNPDAIIQEYGADTLR 613

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            F +      +   +   GL+         G    ++R   + + D DG           
Sbjct: 614 LFEMFLGPLQQSKPWSSKGLE---------GPHRFLARVWRLFM-DEDGEGMWVLRTDIV 663

Query: 387 DES----ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPD 442
           DE     I  +  + + E+ ++++N   H A+A++++ V+E+ +    +  W+       
Sbjct: 664 DEQPPLPIQKLQHKTVAEVTQDIENFQFHTAIAKLMTFVNELTK---EKTRWKSVLEVLL 720

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                                 F P L  +++  L  AD
Sbjct: 721 LLL-----------------SPFAPHLCEELWHNLGHAD 742


>gi|29840422|ref|NP_829528.1| isoleucyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539548|sp|Q822L8|SYI_CHLCV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29834771|gb|AAP05406.1| isoleucyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 1043

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 62/461 (13%), Positives = 138/461 (29%), Gaps = 26/461 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F       V      D HG    +  +  G     ++    +        L   +     
Sbjct: 333 FFVCKEHHVPIVCPVDNHGCFTEEIPEYQG----QYIKSCDKGIIKSLKNLGKVF----- 383

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYN 151
                +H T    +                 +      ++D+    + +++   +     
Sbjct: 384 -----YHGTVMHRYPFCWRTDTPLIYKTVNSWFVSVEKIKDKMLRANQKIHWVPEHIKEG 438

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLS 210
                +    +              +   +     ++   +  E ++  K S L    + 
Sbjct: 439 RFGKWLDGARDWAISRNRYWGTPIPIWKSKEGEILVIGSVKELEELTGEKISDLHCHFID 498

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
           +   +   K      Y+   W D+         Y           +PAD    G D    
Sbjct: 499 QLKVEKEGKTFQRVPYVFDCWFDSGAMPYAQNHYPFENQKETEAGFPADFIAEGLDQTRG 558

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +   +  L         + +   +   G K+SK L N   P+ ++   G DALR +
Sbjct: 559 WFYTLTVISSALFDQTAFKNAIVNGIVLAEDGNKMSKRLNNYPSPMGIMNTYGADALRLY 618

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--E 385
           L+  +    +D  +   G++  +   L      L        L  +D         T  E
Sbjct: 619 LLDSVVVKAEDLRFSDKGVESILKQILLPLTNVLSFFKTYTDLYGFDADNYDKEEITYSE 678

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRA 444
            D  ILS    V+ ++RE+M +  ++ A+   ++ + ++ + Y    +    +  +    
Sbjct: 679 IDRWILSNLYTVVGKVRESMSSYNLNTAVNPFVTFIDDLTNWYIRRCRRRFWESEDTPDR 738

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                   EV+     ++  F+P ++  I+  +        
Sbjct: 739 RAAFATLYEVLTVFCRVIAPFIPFISEDIYQQIKTEHSAES 779



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTK 70
             +    PH GH     I DV+ RF  +DG  V    G D HG  +    +      T  
Sbjct: 48  PPFATGLPHYGHLLAGTIKDVVGRFATMDGYYVPRRFGWDCHGVPVEYEVEKSLDLTTPG 107

Query: 71  VF----VDQNSRNFRDMADVLDISYDDFIR-------------TTEKRHHDTCRILWKKI 113
                 V + +   R +       ++ ++              T +    ++   +++ +
Sbjct: 108 AIEDFGVAKFNEECRKIVFRYVDEWERYVHRLGRWVDFSVTWKTMDASFMESVWWVFRSL 167

Query: 114 SDKGDIYK 121
            D+G +Y+
Sbjct: 168 YDQGLVYE 175


>gi|89094614|ref|ZP_01167551.1| valyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081084|gb|EAR60319.1| valyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 951

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 124/400 (31%), Gaps = 87/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + +F          +   E      +P +  N + +     ++D  +SR+   W
Sbjct: 372 IEPMLTDQWFADAKTLAKPAVEAVEKGDIKFVPQQYEN-MYNAWMRDIQDWCISRQ-LWW 429

Query: 217 GIKIP------------------------------DDPQYIMYVWIDALTNYLTTTGYLD 246
           G +IP                                   ++  W  +      T G+ +
Sbjct: 430 GHRIPAFYDNEGNVYVANDKEAAREKYGLDPEVELRQDDDVLDTWFSSALWTFGTLGWPE 489

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N    +    P D+ V G DI+ F         +           +P      +      
Sbjct: 490 NTQRLQTFH-PTDVLVTGFDIIFFWVARMIMMTMHFMKDEDGKPQVPFKTVYVTGLIRDE 548

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G+K+SKS GNV+DP+++I+ +                                     G
Sbjct: 549 NGDKMSKSKGNVLDPLDMIDGIELDQLLDKRCGNMMQPQLAEKIGKRTKKEFPEGIQAHG 608

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+ L    + G+D  +D   L+     +  N I N  +R V M  +  D       
Sbjct: 609 TDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKIWN-AARYVLMNTEGEDCGQNGGE 665

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              + +D  I S    V  E+ ++        A   +   +       Y +  KP  L  
Sbjct: 666 VELSLADRWISSRLQTVEAEVVKHFDEYRFDMASKTLYDFIWNDYCAWYLELSKP-VLWD 724

Query: 439 TN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +   +         V V+  +  L    +P +  +I+  
Sbjct: 725 EDASAEAKRGTRRTLVRVLEVILRLAHPIMPYITEEIWQQ 764



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 25/171 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              I  PN     H+GHA++  I D L R+ R+ G + L+  GTD  G       +    
Sbjct: 34  CIMIPPPNVTGSLHMGHAFQHTIMDALTRYKRMQGKNTLWQVGTDHAGIATQMVVERKLA 93

Query: 68  TTKV----------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +           F+++                R + + +D + + F  T +   +   
Sbjct: 94  AEEQKSRHDLGRDAFIEKIWEWKEESGGTITRQMRRLGNSVDWANERF--TMDSGFYHAV 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ ++ D+G +Y+G     +  +     +D EV              P+
Sbjct: 152 QEVFIRLYDEGLVYRGKRLVNWDPKLHTAISDLEVENKEVKGKMWYLRYPL 202


>gi|330938265|gb|EGH41928.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 868

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 115/393 (29%), Gaps = 83/393 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G           +L           P+ R  E       
Sbjct: 425 WGISRQRYWGCPIPIVHCDTCGDVPVPEDQLPVVLPEDVVPDGAGSPLARMPEFY----- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
                  S        K   D              Y +        + + A  W P D +
Sbjct: 480 -----ECSCPKCGAPAKRETDTMDTFVESSWYYARYASPHYEGGLVEPNAANHWLPVDQY 534

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLP-------------------------- 287
           + G +    H +Y   F            N P                            
Sbjct: 535 IGGIEHAILHLLYARFFHKLMRDEGLVTSNEPFKNLLTQGMVNAETYFRMETSGKKTWIN 594

Query: 288 ----------KKVFSHGFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                     K       +   G        EK+SKS  N IDP  +I++ G D  R F+
Sbjct: 595 PADVTLERDAKAKVISATLTSDGLPVEIGGTEKMSKSKKNGIDPQTMIDQYGADTCRLFM 654

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          +   G++              V R     +           A ++  ++
Sbjct: 655 MFASPPDMSLEWSDSGVEGSHR------FLRRVWRLAQAHVAQGPSTGLDAAALSDEQKT 708

Query: 390 ILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
           I     + +++  +++ QNQ  + A+AQV++L++ +      + P   + T  DRA    
Sbjct: 709 IRRAIHQAIKQASQDIGQNQKFNTAVAQVMTLMNVL-----EKAP---QDTPQDRA---- 756

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +  E +  + +LL    P ++++++  L   +
Sbjct: 757 -LMQEGVETVTLLLAPITPHISHELWKQLGHNE 788


>gi|322701499|gb|EFY93248.1| leucyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 962

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 5/192 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+  Y+     YP+   H+GH     IAD +AR+HRL G DVL   G D  G     AA
Sbjct: 82  DRKTNYVLPMFPYPSGSLHLGHLRVYSIADTVARYHRLKGDDVLLPMGWDAFGLPAENAA 141

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+   V+  +N +  ++    ++ S+D    +   +   +   + L+  + ++G  Y
Sbjct: 142 LERGIDPGVWTRRNIKKMKEQLGFMNGSWDWSRELTACDPEFYKHTQKLFLMLHERGLAY 201

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+  + + +FFR S Y++ LL   
Sbjct: 202 QAEAEVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKRKLKQWFFRTSEYREALLRDL 258

Query: 181 ESHPEFILPIER 192
           +   +     +R
Sbjct: 259 DELAKNNAWPDR 270



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 28/202 (13%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK + +        EK+SKS  N +DP E I + G DA R  ++ +   G    +D+  +
Sbjct: 676 PKIIATGVPAKVAFEKMSKSKHNGVDPSECIAKYGADATRAHIIFQAPVGYILNWDEAKI 735

Query: 347 --KKRVNADLANGIGNLV----SRSVSMILKD----YDGMIPTPGAFTESDESILSVCSR 396
               R    L + +  +     SR    +L+        M        ++D ++      
Sbjct: 736 SGVTRWLQRLHDQVVAVAAADESRPAKALLEGKFGSVGSMSSEELTQWDADTALWREVQH 795

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +  + ++      ++  ++ ++ L +             L  +  +       +     
Sbjct: 796 TIASVTQSYDEVYSLNTIVSDLMRLTN------------TLAGSQANEV-----IKKHAC 838

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L+ L+    P  A++ + +L
Sbjct: 839 SVLSRLVAPITPAFADECWSVL 860


>gi|213963215|ref|ZP_03391472.1| valyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954077|gb|EEB65402.1| valyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 877

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 121/391 (30%), Gaps = 27/391 (6%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
              D         +  G   +        L D+ +   D + + A       +   +   
Sbjct: 325 EEKDLLAKKETYTNKVGTSERTKAVIEPRLSDQWFLKMDTLIQPAIKAVLEDESIKLYPK 384

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS-------LSRKT 213
           + E  +              +      +P     E                     S   
Sbjct: 385 KFENTYRHWVENVRDWNISRQLWWGQQIPAYYYGEDKDQFVVAETKAEALALAKEKSGNA 444

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFH- 271
                 +  D    +  W  +    ++    + +  +     ++P +  V G DIL F  
Sbjct: 445 HLTEADLRQDEDA-LDTWFSSWLWPMSVFNGILEPNNPEIEYYYPTNDLVTGPDILFFWV 503

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +    +      P      +      +  K+SKSLGN  D +++I + G D +R  L+
Sbjct: 504 TRMIVAGYEYKGERPFSNVYLTGLVRDKQRRKMSKSLGNSPDALKLIADYGADGVRVGLL 563

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G D  +D+   ++        G GN +  +  ++       +  P A   + +  
Sbjct: 564 LSSAAGNDLLFDEALCQQG------KGFGNKLWNAFQLVKGWQVDTVEQPAAAQLALQWF 617

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            +  + VL E+ ++ +   I  AL  +  L        D    W L+   P+    +   
Sbjct: 618 EAKFNAVLTEVEDHFEKYRISDALMAIYKLTW------DDFCAWLLEMVKPEYGKPMDKA 671

Query: 451 TVE----VIRQLAILLQAFVPKLANKIFDIL 477
           T E        L  LL  F+P L  +I+  L
Sbjct: 672 TYEGVVAAFENLLKLLHPFMPFLTEEIWQSL 702



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ER    I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  ERTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +   V    +  Q      +    L  S D      T ++    
Sbjct: 92  VAKLKEQGIKKSDLTREEFLVHAWEWTHQYGGVILEQLKKLGCSCDWERTKFTMDEELSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLYNKGQIYRGHRMVNWDPEAKTTLSDEEVIY 190


>gi|325963359|ref|YP_004241265.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469446|gb|ADX73131.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 842

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 51  SRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGYDVLHPIGWDSFGLPAENAA 110

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            IS D    + T++  ++   + L+K+  ++G  Y
Sbjct: 111 IKRNAHPSEWTYANIDTQAASFKRYAISADWSRRLHTSDPEYYRWTQWLFKRFYERGLAY 170

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D+    +++V  GA           V       ++F+++ Y D+LL   
Sbjct: 171 RKNSPVNWCPKDQTVLANEQVVNGA----CERCGTTVTKKSLNQWYFKITEYADRLLDD- 225

Query: 181 ESHPEFILPIERRNEVISF 199
                   P        ++
Sbjct: 226 MEQLRGHWPERVLAMQKNW 244



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 89/259 (34%), Gaps = 35/259 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
            +     +   T G  D    +     P   +V G +    H +Y   F         + 
Sbjct: 530 WYFLRFVSPHYTEGPFDPQKINDWM--PVGQYVGGVEHAILHLLYARFFTKVIHDLGLIE 587

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    + + G +L+ G+ +SKSLGN +D  E +++ GVDA+R  ++       D   
Sbjct: 588 TSEPFT-ALLNQGQVLNGGKAMSKSLGNGVDLGEQLDKYGVDAVRLTMIFASPPEDDV-- 644

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D   +    +A        L            D         T  D  + S+  R + + 
Sbjct: 645 DWADVSPSGSAKFLARAWRLAQ----------DVASEPGVDVTTGDRGLRSITHRTIADA 694

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E +     +  +A+++ LV+   +  DA         +P        V V        +
Sbjct: 695 AELLDANKFNVVVAKLMELVNATRKAIDAGA----GGADPAVREAAEAVAV--------I 742

Query: 462 LQAFVPKLANKIFDILFVA 480
           L  F P  A  ++ +L   
Sbjct: 743 LSLFAPYTAEDMWSVLGHP 761


>gi|257125299|ref|YP_003163413.1| leucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049238|gb|ACV38422.1| leucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 892

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 6/206 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ +E  Y+    AYP+ + H+GH     I D +AR+ ++ G +VL   G D  G     
Sbjct: 30  IEGKENYYVLEMFAYPSGKLHVGHLRNYAIGDAIARYKKMKGFNVLHPFGWDSFGLPAEN 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA + G     +   N  N R    ++ +SYD    + T    ++   +  + ++  KG 
Sbjct: 90  AAIDNGAHPGKWTKANIDNMRRQMKLMGLSYDWNRELSTYTPEYYKWNQKFFIEMYKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +         +++V    DG+ +      V   E   ++F+++ Y ++LL 
Sbjct: 150 VYKKKSYVNWCPDCNTVLANEQV---EDGKCWRHGKTDVIQKELSQWYFKITEYAEELLQ 206

Query: 179 YYES-HPEFILPIERRNEVISFVKSG 203
            +E     +   +    +      +G
Sbjct: 207 GHEELRGHWPEQVLTMQKNWIGKSTG 232



 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+++E G D+ R F +      K+  ++ +GL         N +  
Sbjct: 635 EKMSKSKNNGVDPEEIVKEYGSDSSRVFTLFAAPPEKELEWNMNGLAGAYR--FINRLYL 692

Query: 361 LVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQ 416
           L+S +     K+    +       A +E D+ I     + ++++ +++++    + A+A 
Sbjct: 693 LISSTADFADKNVSKENNYGINLDARSEKDKEIQKKLHQTVKKVTDSIEDDFHFNTAIAA 752

Query: 417 VISLVSEVDRYFDAQKPWELKKTN-PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++ L++++  Y    K   + K +    +  V +   EV+ ++ +L+  F P +A++++ 
Sbjct: 753 IMELLNDMTTY----KQNVIDKNDISSESKKVWH---EVLEKVILLIAPFAPHVADELWS 805

Query: 476 ILF--VADENRCFQSLDQRLK 494
            L          + + D++L 
Sbjct: 806 DLGNTTLTFEEEWPAFDEKLT 826


>gi|187250670|ref|YP_001875152.1| valyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186970830|gb|ACC97815.1| Valyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 904

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 15/266 (5%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW- 275
           G     DP  ++  W  +    ++T G+ +        F+P    V G +IL        
Sbjct: 465 GTDFVQDPD-VLDTWFSSALWPISTLGWPEKTK-ELEYFYPTSTMVTGYEILYLWVARMA 522

Query: 276 -PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                 +  LP      +       G+K+SKSLGNVIDP+++  + G DA+R+ L+ +  
Sbjct: 523 ITGIDFTGKLPFKDVFLNGIIRDKTGKKMSKSLGNVIDPLDMTAKYGTDAVRFSLLMQAV 582

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSV 393
            GKD  Y ++ +    N    N I N  SR + M + D  G +  P    E +D  ++  
Sbjct: 583 LGKDIPYAEESIVGARN--FCNKIYN-ASRFILMNMGDLKGPLKMPAEPKELADAWLIDR 639

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  ++  ++      +  A   +   +     D Y +  K     +   DR   V+ + 
Sbjct: 640 YNTAIKTAKDATLKYNMAAAANVLYHFLWGDFCDWYVELAK----ARFESDR-EYVMSIL 694

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
           V V+      L   +P +  +I  +L
Sbjct: 695 VNVLYGTLKALHPMMPFITEEISSVL 720



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I           HIGHA    + DVL R  R+ G +  +  GTD  G      
Sbjct: 31  KNKVPFVIVIPPPNITGALHIGHALNCTLQDVLIRTERMLGKESFWVPGTDHGGIATQNV 90

Query: 62  AQNAGVTTKVFVD----------QNSRNFRD-----------MADVLDISYDDFIRTTEK 100
            +      +              +  + +++           M   +D+S ++   T ++
Sbjct: 91  LEKKLAKEQKITRHDLGREKFLEEMWKWYKECGGAILNQFEKMGWAIDLSLENIRFTMDE 150

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   +    +K+  DK  IY+G     + +R     +D EV  
Sbjct: 151 KRAASVYECFKQWWDKKYIYRGKRMINWCVRCNTALSDIEVDH 193


>gi|86152076|ref|ZP_01070288.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840861|gb|EAQ58111.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 870

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 146/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 327 FIEKIEEYNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 385

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 386 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 443

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 444 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 503

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 504 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 563

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I       +
Sbjct: 564 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYVKFQTCV 619

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 620 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 671

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 672 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 724



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 18/171 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 30  EKDKNFCIMMPPPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNV 89

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                        + +Q+     D    L I  ++     T ++   
Sbjct: 90  VEKQLLAQGIKKEELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLV 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           +  +  + ++ DK  I +G Y   +   D A  + +  YK   G+ Y+ ++
Sbjct: 150 NAVKKAFVELYDKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKY 200


>gi|281335130|gb|ADA62214.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
          Length = 1024

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 141/391 (36%), Gaps = 64/391 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +     NP+ +   EG+F + + +++++++   +   F  P   +   +      +
Sbjct: 377 HNYPHCWRCGNPLIYYAMEGWFIKTTNFKNEIINNNNNIEWF--PSHIKEGRMGNFLENM 434

Query: 205 KDLSLSRKTFDWGIK----IPDDPQY---------------------------------- 226
            D ++ R    WG      I +D  +                                  
Sbjct: 435 VDWNIGRNR-YWGTPLNVWICNDCNHEYAPSSIKDLQNNSINKIDEDIELHRPYVDNITL 493

Query: 227 --------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                         ++ VW D+ +       Y  +      + +PAD    G D     F
Sbjct: 494 SCPKCNGKMSRVEEVIDVWFDSGSMPFAQHHYPFDNQKIFNQHFPADFIAEGVDQTRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + +L       + +     +   G+K+SKS GNVI+P E+I + G D+LR+ L+
Sbjct: 554 YSLLVISTILKGKSSYKRALSLGHILDSNGKKMSKSKGNVINPTELINKYGADSLRWALI 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDES 389
            + A   +  +  + +  +  +   + + N+     +   +  Y+       +    D  
Sbjct: 614 SDSAPWNNKRFS-ENIVAQTKSKFIDTLDNIYKFYNMYNKIDHYNPNNEITKSRNTLDNW 672

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ--KPWELKKTNPDRAST 446
            LS  + +++E    + N     A   +    + + + Y      + WE   +N  + + 
Sbjct: 673 ALSRLNTLIKESNIYVNNYDFTSAARLINEYTNTISNWYIRRSRGRFWEQGISNDKKDA- 731

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 E++  L+ L+  FVP ++ KI   L
Sbjct: 732 -YNTLYEILTTLSRLVAPFVPFISEKIHYNL 761



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E           N  PH GH    +I D++AR   + G  V    G D HG  +   
Sbjct: 30  KGQESFVFYDGPPTANGLPHAGHVLGRVIKDLVARLKTMQGFYVERKAGWDTHGLPVELE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +RD +  L   +  D    T E  +
Sbjct: 90  VEKKIGIKGKQDIEKYGIENFINECKKSVFNYEKEWRDFSKDLGYWVDMDSPYITLENNY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +      KG +YKG     Y   D+   +  EV +G  
Sbjct: 150 IESVWNILSTFHKKGLLYKGHKVTPYCTHDQTALSSHEVAQGYK 193


>gi|114765738|ref|ZP_01444836.1| leucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541955|gb|EAU44990.1| leucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 856

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ + +G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKQNGFNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L    D      T +  ++   + L+  + + G +Y
Sbjct: 90  MASGGHPKDWTYSNIDTMVEQMKPLGFGLDWSRMFATCDPDYYGQQQGLFLDMLEAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S +  +LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERKELTQWFFKISDFSGELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +   ++   ++           GL
Sbjct: 206 DGLDDWPAKVKLMQANWIGRSRGL 229



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 121/400 (30%), Gaps = 84/400 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L Y E        I      +     
Sbjct: 427 WGLSRQRYWGCPIPVVHCEACGVVPEKKENLPIQLPYDEGGKPIDFSIP--GNPLDRHPD 484

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                  S            D       +    T+    T          A +   D ++
Sbjct: 485 WRDCACPSCGAPARRETDTMDTFVDSSWYFARFTSPDADTP---VDPEEAAYWMNVDQYI 541

Query: 263 IGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFI------------ 296
            G +    H +Y      A  L+ +LP            + + +H               
Sbjct: 542 GGIEHAILHLLYSRFFARAMHLTGHLPEKCKEPFNALFTQGMVTHAIYQTKSAEGRPVYH 601

Query: 297 ------LHKGE---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                 L  G                K+SKS  NV+DP+ +I + G D  R+F++ +   
Sbjct: 602 YPEAVELRDGRGFLEDGTEVEIIPSAKMSKSKNNVVDPVAIIGQYGADTARWFVLSDSPP 661

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G      A+ AN   + V R+ + I              T  DE++L    
Sbjct: 662 ERDVEWTASG------AEAANKHLSRVYRACAEIAAG-------DVPPTGEDEALLREMH 708

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + + ++   +++   + A+A++ +  + + +                RA T      +  
Sbjct: 709 KAIHDVTMGVESFGFNAAIARLYAFTNALTK---------------SRAGT--EAKTQAA 751

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
           + LA L+    P L+ +I+ +L       +  +   D+ +
Sbjct: 752 KVLAQLMSPMTPHLSEEIWQLLGGEGLIADAAWPEADEAM 791


>gi|228475846|ref|ZP_04060560.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|228270122|gb|EEK11582.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
          Length = 1024

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 141/391 (36%), Gaps = 64/391 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +     NP+ +   EG+F + + +++++++   +   F  P   +   +      +
Sbjct: 377 HNYPHCWRCGNPLIYYAMEGWFIKTTNFKNEIINNNNNIEWF--PSHIKEGRMGNFLENM 434

Query: 205 KDLSLSRKTFDWGIK----IPDDPQY---------------------------------- 226
            D ++ R    WG      I +D  +                                  
Sbjct: 435 VDWNIGRNR-YWGTPLNVWICNDCNHEYAPSSIKDLQNNSINKIDEDIELHRPYVDNITL 493

Query: 227 --------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                         ++ VW D+ +       Y  +      + +PAD    G D     F
Sbjct: 494 SCPKCNGKMSRVEEVIDVWFDSGSMPFAQHHYPFDNQKIFNQHFPADFIAEGVDQTRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + +L       + +     +   G+K+SKS GNVI+P E+I + G D+LR+ L+
Sbjct: 554 YSLLVISTILKGKSSYKRALSLGHILDSNGKKMSKSKGNVINPTELINKYGADSLRWALI 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDES 389
            + A   +  +  + +  +  +   + + N+     +   +  Y+       +    D  
Sbjct: 614 SDSAPWNNKRFS-ENIVAQTKSKFIDTLDNIYKFYNMYNKIDHYNPNNEITKSRNTLDNW 672

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ--KPWELKKTNPDRAST 446
            LS  + +++E    + N     A   +    + + + Y      + WE   +N  + + 
Sbjct: 673 ALSRLNTLIKESNIYVNNYDFTSAARLINEYTNTISNWYIRRSRGRFWEQGISNDKKDA- 731

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 E++  L+ L+  FVP ++ KI   L
Sbjct: 732 -YNTLYEILTTLSRLVAPFVPFISEKIHYNL 761



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E           N  PH GH    +I D++AR   + G  V    G D HG  +   
Sbjct: 30  KGQESFVFYDGPPTANGLPHAGHVLGRVIKDLVARLKTMQGFYVERKAGWDTHGLPVELE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +RD +  L   +  D    T E  +
Sbjct: 90  VEKKIGIKGKQDIEKYGIENFINECKKSVFNYEKEWRDFSKDLGYWVDMDSPYITLENNY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +      KG +YKG     Y   D+   +  EV +G  
Sbjct: 150 IESVWNILSTFHKKGLLYKGHKVTPYCTHDQTALSSHEVAQGYK 193


>gi|254466755|ref|ZP_05080166.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687663|gb|EDZ48145.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 854

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  GKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T +  ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S + ++LLS  
Sbjct: 150 RRNAVVNWDPIDMTVLANEQVENG----RGWRSGALVERRELTQWFFKISDFSEELLSAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   +    E       GL+
Sbjct: 206 DTLENWPAKVRLMQENWIGKSRGLQ 230



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 114/385 (29%), Gaps = 89/385 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G            L Y E        +            
Sbjct: 424 WGLSRQRYWGCPIPVVHCEDCGVVPEKKENLPIALPYDEGGKPIDFSVPGNP-------L 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y             D ++A++W   
Sbjct: 477 DRHPTWRDCACPSCGKPAQRETD-TMDTFVD-SSWYFARFTAPRAETPTDMAEAEYWMNV 534

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKG---- 300
           D ++ G +    H +Y      A  +  +LP            + + +H      G    
Sbjct: 535 DQYIGGIEHAILHLLYSRFFARAMHICGHLPEKSKEPFDALFTQGMVTHAIYKTTGDNHR 594

Query: 301 -----------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                                         K+SKS  NV+DP+ +I   G D  R+F++ 
Sbjct: 595 PVYHYPEEVELKDGKGFLKDGTEVEIIPSAKMSKSKNNVVDPLHIISSFGADTARWFVLS 654

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  +   G +        N + NL  R   M     D   P  G     DE +L
Sbjct: 655 DSPPERDVEWTASGAEAAHKH--LNRVWNLCDRIGEM-----DREAPGVG-----DEELL 702

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++   + +   + A+A++ +                L K+          V 
Sbjct: 703 REMHKCIRDVTLGIDSFGFNAAIAKLYAFTG------------TLSKSKAG-----YKVQ 745

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
            + I  LA L+    P LA  I++ 
Sbjct: 746 RQAIMTLAQLMSPMTPHLAEDIWNH 770


>gi|159899490|ref|YP_001545737.1| isoleucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892529|gb|ABX05609.1| isoleucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1061

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 136/409 (33%), Gaps = 35/409 (8%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           +IRTT          L +++               + R    + ++ +      + Y   
Sbjct: 422 YIRTT---------ALKQQLIANNKKINWVPEHIQAGRFGN-WLENNIDWAISRERYWGT 471

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             PV            +    + +    S  E      +    +   +  +   S S   
Sbjct: 472 PLPV-----------WTCDTCQHIDVVGSLAELGERWGQDTANLDMHRPFVDAPSWSCPE 520

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
            + G         +   W D+    +    Y             AD      D     F+
Sbjct: 521 CEAGTMQRIPD--VADCWFDSGAMPVAQWHYPFENQELFEVAGQADFISEAIDQTRGWFY 578

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  + LL         +     +  KGEK+SKS GN++ P E++E+ G DA+R+++  
Sbjct: 579 TLHAVSTLLFDRPAYKNVICLGHLLDGKGEKMSKSKGNIVSPWEMVEKYGADAVRWYMFA 638

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDES 389
                    +  D L           + N  S   +    + DG  P    G     D  
Sbjct: 639 AGQPYNPRRFSAD-LVSESLRQFLLTLWNTYSFFTT--YANVDGWTPELAQGDLAAIDRW 695

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAST 446
            L+  + +++++R ++ N  ++    ++   V E+ + Y   + ++ W        +A+ 
Sbjct: 696 ALARLNALVRDVRNDLSNYDMNTPAKRLEQFVDELSNWYVRRNRRRFWGSDMNGDKQAA- 754

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                   +  ++ L+  F P +A  ++  L  + +    +S+   L P
Sbjct: 755 -YSTLYTCLVTISKLMAPFTPFVAESLYQNLVRSYDQTAAESVHMALYP 802



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 24/164 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAKAAQ 63
                       N +P I H       D++ RF+R+ G  V+    G D HG  +    +
Sbjct: 40  RPFVFFEGPPTANGRPGIHHVEARSSKDIMVRFNRMLGKKVIGARGGWDTHGLPVELEVE 99

Query: 64  NA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
                                    +   ++ +  +  + +A  +D+  D +I T + ++
Sbjct: 100 KKLGFAGKPDIEKYGITEFNAACRQSVWDYIQEWEKLTQRIAFWIDLE-DPYI-TYDNKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ ++  +Y+      +  R     +D EV +G  
Sbjct: 158 IESLWWIFKQLHERELLYRDYKVTMHCPRCGTSLSDHEVAQGYQ 201


>gi|189083224|sp|A9WS85|SYL_RENSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 862

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E+ Y+     YP+   H+GHA   ++ DV+ R+ +L G DVL   G D  G     AA
Sbjct: 68  SKERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFDVLHPVGWDSFGLPAENAA 127

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N              + +   ++T++  ++   + L+ +  ++G  Y
Sbjct: 128 IKRNAHPAEWTYANIETQAASFKRYAIGVDWSRRLQTSDPEYYRWTQWLFLRFYERGLAY 187

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D     +++V  GA          PV       ++F+++ Y D+LL   
Sbjct: 188 RKNSPVNWCPKDLTVLANEQVINGA----CERCGTPVTKKNLNQWYFKITDYADRLLDD- 242

Query: 181 ESHPEFILPIERRNEVISF 199
            +  E   P        ++
Sbjct: 243 MAQLEGHWPERVLAMQRNW 261



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 103/280 (36%), Gaps = 39/280 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFL---- 279
           +  ++D+   YL  T               ++   D +V G +    H +Y   F+    
Sbjct: 542 IDTFVDSSWYYLRYTSPEYTDGPFDPAAATRWMGVDQYVGGVEHAILHLLYSRFFVKVLN 601

Query: 280 ----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L A  P  K + + G +L+ G+ +SKSLGN +D  + ++  GVDA+R  +V     
Sbjct: 602 DLGLLEAKEPF-KALLNQGQVLNGGKAMSKSLGNGVDLSQQLDRFGVDAVRLTMVFASPP 660

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             D   D   +    +A        L     S I  D     P  G     D ++ SV  
Sbjct: 661 EDDV--DWADVSPSGSAKFLARAWRLAQDVTSEIGVD-----PATG-----DRALRSVTH 708

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R L E  + +     +  +A+ + LV+   +  D+                      E +
Sbjct: 709 RTLSEAADLIDAHKFNVVVAKTMELVNITRKSIDS------------GCGPADPAVREAV 756

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
             +A++L  F P  A  I+  L   D      + ++D  L
Sbjct: 757 EAVAVILSLFAPYTAEDIWAELGHQDFVARASWPTVDDSL 796


>gi|87159883|ref|YP_492689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|242241777|ref|ZP_04796222.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251809763|ref|ZP_04824236.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281427748|ref|YP_003347951.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|293367342|ref|ZP_06614005.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|87125857|gb|ABD22976.1| Isoleucyl-tRNA synthetase, mupirocin resistant protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|242234768|gb|EES37079.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251806703|gb|EES59360.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|270299928|gb|ACZ68734.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281307462|gb|ADA57909.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281334993|gb|ADA62077.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281335063|gb|ADA62147.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|281336260|gb|ADA62809.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|291318532|gb|EFE58915.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|316994942|gb|ADU79024.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|316994945|gb|ADU79026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|316994948|gb|ADU79028.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|316994951|gb|ADU79030.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
          Length = 1024

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 141/391 (36%), Gaps = 64/391 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +     NP+ +   EG+F + + +++++++   +   F  P   +   +      +
Sbjct: 377 HNYPHCWRCGNPLIYYAMEGWFIKTTNFKNEIINNNNNIEWF--PSHIKEGRMGNFLENM 434

Query: 205 KDLSLSRKTFDWGIK----IPDDPQY---------------------------------- 226
            D ++ R    WG      I +D  +                                  
Sbjct: 435 VDWNIGRNR-YWGTPLNVWICNDCNHEYAPSSIKDLQNNSINKIDEDIELHRPYVDNITL 493

Query: 227 --------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                         ++ VW D+ +       Y  +      + +PAD    G D     F
Sbjct: 494 SCPKCNGKMSRVEEVIDVWFDSGSMPFAQHHYPFDNQKIFNQHFPADFIAEGVDQTRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + +L       + +     +   G+K+SKS GNVI+P E+I + G D+LR+ L+
Sbjct: 554 YSLLVISTILKGKSSYKRALSLGHILDSNGKKMSKSKGNVINPTELINKYGADSLRWALI 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDES 389
            + A   +  +  + +  +  +   + + N+     +   +  Y+       +    D  
Sbjct: 614 SDSAPWNNKRFS-ENIVAQTKSKFIDTLDNIYKFYNMYNKIDHYNPNNEITKSRNTLDNW 672

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ--KPWELKKTNPDRAST 446
            LS  + +++E    + N     A   +    + + + Y      + WE   +N  + + 
Sbjct: 673 ALSRLNTLIKESNIYVNNYDFTSAARLINEYTNTISNWYIRRSRGRFWEQGISNDKKDA- 731

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 E++  L+ L+  FVP ++ KI   L
Sbjct: 732 -YNTLYEILTTLSRLVAPFVPFISEKIHYNL 761



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E           N  PH GH    +I D++AR   + G  V    G D HG  +   
Sbjct: 30  KGQESFVFYDGPPTANGLPHAGHVLGRVIKDLVARLKTMQGFYVERKAGWDTHGLPVELE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +RD +  L   +  D    T E  +
Sbjct: 90  VEKKIGIKGKQDIEKYGIENFINECKKSVFNYEKEWRDFSKDLGYWVDMDSPYITLENNY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +      KG +YKG     Y   D+   +  EV +G  
Sbjct: 150 IESVWNILSTFHKKGLLYKGHKVTPYCTHDQTALSSHEVAQGYK 193


>gi|281334672|gb|ADA61756.1| Isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
          Length = 1024

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 141/391 (36%), Gaps = 64/391 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +     NP+ +   EG+F + + +++++++   +   F  P   +   +      +
Sbjct: 377 HNYPHCWRCGNPLIYYAMEGWFIKTTNFKNEIINNNNNIEWF--PSHIKEGRMGNFLENM 434

Query: 205 KDLSLSRKTFDWGIK----IPDDPQY---------------------------------- 226
            D ++ R    WG      I +D  +                                  
Sbjct: 435 VDWNIGRNR-YWGTPLNVWICNDCNHEYAPSSIKDLQNNSINKIDEDIELHRPYVDNITL 493

Query: 227 --------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                         ++ VW D+ +       Y  +      + +PAD    G D     F
Sbjct: 494 SCPKCNGKMSRVEEVIDVWFDSGSMPFAQHHYPFDNQKIFNQHFPADFIAEGVDQTRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + +L       + +     +   G+K+SKS GNVI+P E+I + G D+LR+ L+
Sbjct: 554 YSLLVISTILKGKSSYKRALSLGHILDSNGKKMSKSKGNVINPTELINKYGADSLRWALI 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDES 389
            + A   +  +  + +  +  +   + + N+     +   +  Y+       +    D  
Sbjct: 614 SDSAPWNNKRFS-ENIVAQTKSKFIDTLDNIYKFYNMYNKIDHYNPNNEITKSRNTLDNW 672

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ--KPWELKKTNPDRAST 446
            LS  + +++E    + N     A   +    + + + Y      + WE   +N  + + 
Sbjct: 673 ALSRLNTLIKESNIYVNNYDFTSAARLINEYTNTISNWYIRRSRGRFWEQGISNDKKDA- 731

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 E++  L+ L+  FVP ++ KI   L
Sbjct: 732 -YNTLYEILTTLSRLVAPFVPFISEKIHYNL 761



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E           N  PH GH    +I D++AR   + G  V    G D HG  +   
Sbjct: 30  KGQESFVFYDGPPTANGLPHAGHVLGRVIKDLVARLKTMQGFYVERKAGWDTHGLPVELE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +RD +  L   +  D    T E  +
Sbjct: 90  VEKKIGIKGKQDIEKYGIENFINECKKSVFNYEKEWRDFSKDLGYWVDMDSPYITLENNY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +      KG +YKG     Y   D+   +  EV +G  
Sbjct: 150 IESVWNILSTFHKKGLLYKGHKVTPYCTHDQTALSSHEVAQGYK 193


>gi|315124298|ref|YP_004066302.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018020|gb|ADT66113.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 645

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 146/414 (35%), Gaps = 54/414 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +          Y    +N V+    + + F       + +           P    N 
Sbjct: 102 FIEKIEEYNNQIGYCYRCNNIVEPYISKQW-FVKKEIAQESIEKVALGESKFYPNHWINS 160

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKI---------------------------PDDPQYIM 228
             +++K  L+D  +SR+   WG +I                               + ++
Sbjct: 161 FNAWMKD-LRDWCISRQ-LWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVL 218

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKF--------WPADLHVIGKDILRFH--AIYWPAF 278
             W  +    ++T G+ +   G    +        +P  L + G DIL F    + + + 
Sbjct: 219 DTWFSSGLWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQST 278

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP             +G K+SKSLGNVIDP E I+E   D LR+ L      G+D
Sbjct: 279 NALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRD 338

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
                D L +  N    N I N  +  +    K  D    T    +E  + I       +
Sbjct: 339 IKLSNDKLLQVRN--FTNKIYNATNYLLLNESKFEDLENITLH--SELAKYIYVKFQTCV 394

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++REN+ N   + A   +         ++D    W ++ +  +++S  +     + ++ 
Sbjct: 395 KDVRENLDNYRFNDAANTLYKF------FWDDFCDWGIELSKAEKSS--VKELGSIFKEA 446

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH-KTFDPIFPRFL 511
             LL  F+P ++  ++  L    E +   S+     P F    K  + IF   +
Sbjct: 447 LKLLNPFMPFISEYLYHKLS-DTELKTSPSIMISKYPKFKEQDKNIEKIFSLLI 499


>gi|91217261|ref|ZP_01254222.1| isoleucyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184604|gb|EAS70986.1| isoleucyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 1135

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 8/268 (2%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAI 273
           G  +  +   ++ VW D+ +       Y           W  AD    G D     F+ +
Sbjct: 595 GHPMKREAD-LIDVWFDSGSMPYAQWHYPFENKEKVENTWRSADFIAEGVDQTRGWFYTL 653

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +  A ++  ++     V +   +  KG+K+SK LGN  DP E ++  G DA R++++   
Sbjct: 654 HAIATMIFDDVAYKNVVSNGLVLDKKGQKMSKRLGNAADPFETLKTYGPDATRWYMITNA 713

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESIL 391
               +  +D DG+ +                S+   L  ++            E D  IL
Sbjct: 714 NPWDNLKFDLDGIGEVQRKFFGTLYNTYSFFSMYANLDHFEYKEEDIELSKRPEIDRWIL 773

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + ++Q + E   +    +A   +   V E   + Y    +    K        +   
Sbjct: 774 SELNTLIQTVDEFFASYEPTKATRAISEFVQENMSNWYVRLSRRRFWKGEYESDKISAYQ 833

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
                ++ +A L     P  +++++  L
Sbjct: 834 TLFTCLKTIAQLSAPVAPFFSDRLYKDL 861



 Score = 53.6 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P I H     I D+  R+    G  V    G D HG  +    + 
Sbjct: 41  EPFIFFEGPPSANGMPGIHHVMARSIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELKVEK 100

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 K  V + +  + D+   +   +  ++   T + ++ +T
Sbjct: 101 ELGISKEDIGTKISVEDYNKACKEAVMRYTDVWNDLTKKIGYWVDMENPYVTYKSKYMET 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
              L  +I  KG +YKG     YS +
Sbjct: 161 VWWLLSEIYKKGLVYKGYTIQPYSPK 186


>gi|313681647|ref|YP_004059385.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154507|gb|ADR33185.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 815

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+ +   YP+ + H+GH     I D  AR++R  G +VL   G D  G     AA
Sbjct: 29  SKPKKYVLSMFPYPSGRIHMGHVRNYTIGDAFARYYRQQGFNVLHPIGWDSFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +  +N    R     L +S+  D    T+   +    +     + ++G +Y
Sbjct: 89  IKHGVHPKKWTYENIATMRGELAGLGLSFSEDREFATSNPEYTAFEQGFIIDMFNRGLLY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G           P+   E   Y+ ++S Y ++LL   
Sbjct: 149 RKQGFLNWCPHDLTVLANEQVVDG----GCWRCGTPIVQKEMYQYYLKISDYAEELLESL 204

Query: 181 ES-HPEFILPIERRNEVISFVKSGL 204
           ++   ++   +    E       GL
Sbjct: 205 KTLEGKWPKQVLTMQENWIGKSYGL 229



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 120/356 (33%), Gaps = 47/356 (13%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            D    +     V     + +      Y    +         I+P ++ N  ++  +  +
Sbjct: 406 MDHFEASHLGKKVINFRLKDWGISRQRYWGAPIPLIHCESCGIVPEDKANLPVALPEDVV 465

Query: 205 KDLSLSRKTFDWGIKIPDDPQ---------YIMYVWI---DALTNYLTTTGYLDNPDGSK 252
            +   +        K    P+           M  +I        Y     Y    D + 
Sbjct: 466 INGEGNPLEHHPTWKHCTCPKCGKSAVRETDTMDTFIQSSWYFLRYTVKNDYQKALDPAA 525

Query: 253 AKFWP-ADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKI 303
             +W   D ++ G +    H +Y   F         ++++ P  + + + G +L  G K+
Sbjct: 526 LDYWMGVDHYIGGIEHAILHLLYARFFTKMLRDLGYVNSDEPF-EHLLTQGMVLKDGAKM 584

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN +DP E++ + G D  R F++      ++  ++   ++          +     
Sbjct: 585 SKSKGNTVDPGELVAKYGADTARLFILFAAPPTQELEWNDSAVEGAF-----RFLKRFAD 639

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVS 422
           RS  + + D           ++ +++        L+  +E   +    +  +A V+  ++
Sbjct: 640 RSQYVNVTD-KLPSIEHSTLSKEEKAARKKVYEALKRAQEVYGERHTFNTMIAGVMEAMN 698

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++           ++ N D       V  E    L  +++  VP +  ++   LF
Sbjct: 699 ALN-----------EQNNRD-------VWTEGYWILTSVMEPIVPHICWELSTNLF 736


>gi|119509064|ref|ZP_01628215.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466230|gb|EAW47116.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 873

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 81/202 (40%), Gaps = 5/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 32  KPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYKVLHPMGWDAFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + GV    +  QN    R     L   I ++  + T    ++   + ++ +    G  Y+
Sbjct: 92  DRGVPPAKWTYQNIAQMRQQLQRLGLAIDWETELATCSPDYYKWTQWIFLQFWQAGLAYQ 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V    +G+ + +    V+      +F +++ Y ++LL+  +
Sbjct: 152 KEAAVNWDPIDQTVIANEQV--DNEGRSWRSGAK-VERKLLRQWFLKITDYAEELLNDLD 208

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   ++          +G
Sbjct: 209 KLTGWPERVKLMQANWIGKSTG 230



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 108/319 (33%), Gaps = 68/319 (21%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y          D +K   W P D +V G +    H +Y   
Sbjct: 507 KRETDTMDTFIDSSWYFLRYPDAQNEQQVFDPAKTNDWMPVDQYVGGIEHAILHLLYSRF 566

Query: 278 FL--------LSANLPLP----------------------KKVFSHGFILHKGEK----- 302
           F         L+ + P                        K V S+              
Sbjct: 567 FTKVLRDRGLLNFDEPFQRLLTQGMVQGLTYMNPNKGGKDKWVPSNLVNAADPRDPQTGE 626

Query: 303 --------ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                   +SKS GN + P +VI + GVD  R F++ +    KD  +D+  ++ +     
Sbjct: 627 PLQRLYATMSKSKGNGVAPEDVISKYGVDTARMFILFKAPPEKDLEWDEADVEGQFR--F 684

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRA 413
            N +  LV+   +                ++ ++ +       +Q + E+++     + A
Sbjct: 685 LNRVWRLVTDYAT---AGVSRKKAQLSDLSKPEKELRRAIHTAIQAVTEDLEDEYQFNTA 741

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +++++ L + +              T+ D  ++   +  E I+ L I+L  F P +A+++
Sbjct: 742 VSELMKLSNAL--------------TDADCKNS--PIYAEGIQTLVIMLAPFAPHIADEL 785

Query: 474 FDILFVADE--NRCFQSLD 490
           +  L   +    + + S D
Sbjct: 786 WQSLGNTNSIHTQTWPSFD 804


>gi|166153455|ref|YP_001653102.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|1174516|sp|P41368|SYI2_STAAU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|581558|emb|CAA53189.1| isoleucyl tRNA synthetase [Staphylococcus aureus]
 gi|165880096|gb|ABY70707.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
          Length = 1024

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 141/391 (36%), Gaps = 64/391 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +  +     NP+ +   EG+F + + +++++++   +   F  P   +   +      +
Sbjct: 377 HNYPHCWRCGNPLIYYAMEGWFIKTTNFKNEIINNNNNIEWF--PSHIKEGRMGNFLENM 434

Query: 205 KDLSLSRKTFDWGIK----IPDDPQY---------------------------------- 226
            D ++ R    WG      I +D  +                                  
Sbjct: 435 VDWNIGRNR-YWGTPLNVWICNDCNHEYAPSSIKDLQNNSINKIDEDIELHRPYVDNITL 493

Query: 227 --------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                         ++ VW D+ +       Y  +      + +PAD    G D     F
Sbjct: 494 SCPKCNGKMSRVEEVIDVWFDSGSMPFAQHHYPFDNQKIFNQHFPADFIAEGVDQTRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++   + +L       + +     +   G+K+SKS GNVI+P E+I + G D+LR+ L+
Sbjct: 554 YSLLVISTILKGKSSYKRALSLGHILDSNGKKMSKSKGNVINPTELINKYGADSLRWALI 613

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTESDES 389
            + A   +  +  + +  +  +   + + N+     +   +  Y+       +    D  
Sbjct: 614 SDSAPWNNKRFS-ENIVAQTKSKFIDTLDNIYKFYNMYNKIDHYNPNNEITKSRNTLDNW 672

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAST 446
            LS  + +++E    + N     A   +    + + + Y      + WE   +N  + + 
Sbjct: 673 ALSRLNTLIKESNIYVNNYDFTSAARLINEYTNTISNWYIGDSRGRFWEQGISNDKKDA- 731

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 E++  L+ L+  FVP ++ KI   L
Sbjct: 732 -YNTLYEILTTLSRLVAPFVPFISEKIHYNL 761



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E           N  PH GH    +I D++AR   + G  V    G D HG  +   
Sbjct: 30  KGQESFVFYDGPPTANGLPHAGHVLGRVIKDLVARLKTMQGFYVERKAGWDTHGLPVELE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       K  V    + +RD +  L   +  D    T E  +
Sbjct: 90  VEKKIGIKGKQDIEKYGIENFINECKKSVFNYEKEWRDFSKDLGYWVDMDSPYITLENNY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   +      KG +YKG     Y   D+   +  EV +G  
Sbjct: 150 IESVWNILSTFHKKGLLYKGHKVTPYCTHDQTALSSHEVAQGYK 193


>gi|313895992|ref|ZP_07829546.1| isoleucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975417|gb|EFR40878.1| isoleucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 1039

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 113/389 (29%), Gaps = 11/389 (2%)

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T    H   C       +      K        +++    N      G        +H  
Sbjct: 386 THNYPHCWRCDTPLLYYARASWFIKMTAVRDALVKNNNTVNWIPKSIGEGRFGNWIEH-- 443

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL---SLSRKT 213
           VQ        +  +                 +   R+ +        L       ++   
Sbjct: 444 VQDWGISRNRYWGTPLNIWKCDCGCERSVGSIAELRKLQPNCPEDIELHRPYIDEITFPC 503

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G  +   P+ ++  W D+         Y         K++PAD      D     F+
Sbjct: 504 EKCGAAMHRVPE-VIDCWFDSGAMPFAQWHYPFENKEIFEKYFPADFISEAVDQTRGWFY 562

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           ++     LL    P    +         G+K+SKS GN ++P++ +   G DA+R++   
Sbjct: 563 SLIAIGTLLFDESPYRNVIVLGHVQDENGQKMSKSKGNAVEPMDALRRHGADAIRWYFYE 622

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDES 389
             A      +  + +++     +           +   + ++D    T         D  
Sbjct: 623 NSAPWLPNRFSHEAVQEGARKFMGTLWNTYAFYVLYANIDEFDPTQHTISYEKLCVMDRW 682

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL 448
           +LS  + +++ + E + +  +  A   + S V E+ + Y    +     K          
Sbjct: 683 LLSRLNTMVRAVDEYLGSYRVTEAAKALQSFVEELSNWYVRRSRSRFWAKGMEQDKIDAY 742

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +          +P L   I+  L
Sbjct: 743 MTLYTALVTTVKAAAPMIPFLTESIYRNL 771



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N +PHIGH    +I D+L R+  + G  VL   G D HG  +    + 
Sbjct: 39  ETFTFYDGPPTANGRPHIGHVLTRVIKDMLPRYQSMKGKKVLRKAGWDTHGLPVELEVEK 98

Query: 65  AG-----------------VTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
           A                     +  V      + + +DV+    D      T E  + ++
Sbjct: 99  AIGINGKEQIEEYGIEPFVKKCRESVWTYKAMWEEFSDVVGFWADMEHPYITYENNYIES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 +I  KG +Y+G     Y  R     +  EV +G  
Sbjct: 159 VWWALSEIYKKGLLYQGHKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|220912738|ref|YP_002488047.1| leucyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859616|gb|ACL39958.1| leucyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 841

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 50  SRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQQGFDVLHPIGWDSFGLPAENAA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            IS D    + T++  ++   + L+K+  ++G  Y
Sbjct: 110 IKRNAHPSEWTYTNIDTQAASFKRYAISADWSRRLHTSDPEYYRWTQWLFKRFYERGLAY 169

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D+    +++V  GA           V       ++F+++ Y D+LL   
Sbjct: 170 RKNSPVNWCPKDQTVLANEQVVNGA----CERCGTVVTKKSLNQWYFKITDYADRLLDD- 224

Query: 181 ESHPEFILPIERRNEVISF 199
                   P        ++
Sbjct: 225 MEQLRGHWPERVLAMQKNW 243



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 35/259 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
            +     +   T G  D    +     P   +V G +    H +Y   F         + 
Sbjct: 529 WYFLRFVSPDYTEGPFDPAKINDWM--PVGQYVGGVEHAILHLLYARFFTKVINDLGLIE 586

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A+ P    + + G +L+ G+ +SKSLGN +D  E +++ GVDA+R  +V       D   
Sbjct: 587 ASEPF-SALLNQGQVLNGGKAMSKSLGNGVDLGEQLDKYGVDAVRLTMVFASPPEDDV-- 643

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D   +    +A        L            D         +  D  + SV  R + + 
Sbjct: 644 DWADVSPSGSAKFLARAWRLAQ----------DVTSSPGTEASAGDRGLRSVTHRTIADA 693

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E +     +  +A+++ LV+   +  D+         +P        V V        +
Sbjct: 694 AELLDANKFNVVVAKLMELVNATRKAIDSGA----GGADPAVREAAEAVAV--------I 741

Query: 462 LQAFVPKLANKIFDILFVA 480
           L  F P  A  ++++L   
Sbjct: 742 LSLFAPYTAEDMWNVLGHP 760


>gi|89052902|ref|YP_508353.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999652|sp|Q28VD4|SYL_JANSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|88862451|gb|ABD53328.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 863

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + HIGH     + DV+AR  +  G +VL   G D  G     AA
Sbjct: 30  NKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARHKKAMGHNVLHPMGFDAFGLAAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+  K +  +N  + RD    L  S D    + T +  ++   + L+  + + G I 
Sbjct: 90  MDRGIHPKDWTYKNMDDMRDQMRPLGFSIDWSRDLATCDPDYYGQQQALFIDMMEAGLID 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S Y D+LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVEDGKG----WRSGAEVERKELTQWFFKISDYSDELLEAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +   ++   ++           GL+
Sbjct: 206 DGLDDWPAKVKLMQANWIGKSRGLQ 230



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 120/372 (32%), Gaps = 61/372 (16%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-----YESHPEFILPIERRNEVI 197
            G   Q Y     PV   +  G            L Y        +P    P  R     
Sbjct: 431 WGLSRQRYWGCPIPVVHCDACGVVPEKKENLPIELPYDVTFDVPGNPLDRHPTWRNTPCP 490

Query: 198 SFVKSGLKD-------LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           S     L++       +  S     +     D P     V      +             
Sbjct: 491 SCGAPALRETDTMDTFVDSSWYFARFTAPHADTPTSKAEVEYWMNVDQYIGGIEHAILHL 550

Query: 251 SKAKFWPADLHVIG----KDILRFHAIYWPAFLLSA-------------NLPLPKKVFSH 293
             ++F+   +H+ G    K I  F A++    +  A             + P    +   
Sbjct: 551 LYSRFFARAMHITGHLPRKAIEPFDALFTQGMVTHAIYKTTDAKNRPVYHYPETVDLRDG 610

Query: 294 GFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           G  L  G         K+SKS  NV+DPIE+I++ G D  R+F++ +    +D  +   G
Sbjct: 611 GGYLDDGTAVEIIPSAKMSKSKNNVVDPIEIIKQYGADTARWFVLSDSPPERDVEWTASG 670

Query: 346 LKKRVNAD-LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +           + + +S +   + ++         A  E D ++L    + ++++   
Sbjct: 671 AEAAYKHLGRVWALCDRISEAARSVSEE------AQPAAGEHDTALLREMHKTIRDVTNG 724

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           + +   + A+A++ +  +             L+K+     +       E +  LA L+  
Sbjct: 725 VDSFGFNAAIAKLYAFTN------------TLQKSKASHKAQ-----REAVMTLAQLMAP 767

Query: 465 FVPKLANKIFDI 476
             P L+  I+  
Sbjct: 768 MTPHLSEDIWAH 779


>gi|260946053|ref|XP_002617324.1| hypothetical protein CLUG_02768 [Clavispora lusitaniae ATCC 42720]
 gi|238849178|gb|EEQ38642.1| hypothetical protein CLUG_02768 [Clavispora lusitaniae ATCC 42720]
          Length = 955

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  +  T   YP+   H+GH     I+DVLARF RL G DV+   G D  G     AA  
Sbjct: 92  EPFFCLTMFPYPSGNLHLGHQRVFTISDVLARFKRLQGFDVIHPMGWDAFGLPAENAAVE 151

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +  QN    ++    +  D  ++  + T    ++   + ++  + + G  Y+ 
Sbjct: 152 RGVNPATWTKQNIAKMKEQMHAMLADFDWEREVNTCSPEYYRWTQKIFTLLFEHGLAYRM 211

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V               V+    E +F  ++ Y ++L    + 
Sbjct: 212 GAEINWDPVDQTVLANEQVDSE---GRSWRSGAIVEKKVLEQWFIGITKYAEQLQDDLQI 268

Query: 183 HPEFILPIERRNEVISFVKSG 203
             ++   ++   +       G
Sbjct: 269 LDQWPHKVKAMQKNWIGKSPG 289



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 88/235 (37%), Gaps = 31/235 (13%)

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           LS+  PL K   ++       EK+SKS  N +DP+  I + G DA+R   +         
Sbjct: 670 LSSGNPLIKN--TNVTPNVSYEKMSKSKYNGVDPVSCISKYGADAVRAHTLFSAPVSDVL 727

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES------------- 386
            ++++ L+          +  L    V +  +  D        F++              
Sbjct: 728 NWNEEQLQGTERW--LKKVLKLKDDVVEVYKRGQDSSKQNGEEFSDLVLNDMHYESFKLN 785

Query: 387 --DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             + ++ +  S   Q+I ++++   ++  ++  + + +             L++   ++ 
Sbjct: 786 KNELALYNEISSYTQKISKSVEELSLNTVISDYMKITN------------TLQRVLKEKQ 833

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                V ++  ++L +L+    P +A + ++ L +           Q+L  G  +
Sbjct: 834 QIHPEVLMDAYKKLLVLMAPVTPSVAEECWEALCIGLGQEWKSIFFQKLPVGKPI 888


>gi|206890484|ref|YP_002248496.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742422|gb|ACI21479.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 915

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 75/456 (16%), Positives = 142/456 (31%), Gaps = 29/456 (6%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G D+      D+ G+        AG            + ++     + S     + T   
Sbjct: 346 GFDIYAP--VDDKGRFTEDVPYFAGENVFKANKAIIEHMKE-----NGSLIWEGKITHSY 398

Query: 102 HHDT-CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            H   C+      +         +        +       +      + Y+       W 
Sbjct: 399 PHCWRCKKPIIFRATTQWFISMSHKDLRHRALQEIDKVRWIPSWGRERIYSMVERRPDWC 458

Query: 161 --EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS---FVKSGLKDLSLSRKTFD 215
              +  +   ++ +  K         E    I    E      + K  L DL       +
Sbjct: 459 LSRQRAWGVPITLFVCKKCGSIIKEEELFDKIYAFVEKEGSDVWFKLNLHDLLPDYSCPE 518

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G +  D  + I+ VW D+  ++                 WPAD+++ G D     F + 
Sbjct: 519 CGSRDFDKEKDILDVWFDSGVSHAAVLE------RDPRLSWPADMYLEGSDQHRGWFQSS 572

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +       P    +     +  +G K+SKSLGNVI P E+I+  G D +R ++  E 
Sbjct: 573 LIASLGNKGKAPYKIVLTHGFTVDGQGRKMSKSLGNVISPQEIIKSNGADIVRLWVSAED 632

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
               D    ++ L++    +    I N +   +  I  DYD    T     E D   +  
Sbjct: 633 Y-RDDIKLSQEILQRL--TEAYRKIRNTLRYLLGNIY-DYDAKDYT-DQLLEIDRWAMMR 687

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRASTVLYV 450
             +++ ++R   +N   H+    + +         Y D  K      K++        +V
Sbjct: 688 LQKLIGKVRLAYENFEFHQVFHAIYNFCVTDMSAFYLDILKDRLYTFKSDSPERRAAQWV 747

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              +   L  L+   +   A + +  L        F
Sbjct: 748 LYNIADSLIKLIAPILSFTAEEAWQHLPFKKTESVF 783



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 15/152 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +     Y N   HIGHA   I+ D++ ++H + G    F  G D HG  I      + 
Sbjct: 54  FILHDGPPYANGHIHIGHALNKILKDIIVKYHSMLGQYSPFVPGWDCHGLPIELQVDKSL 113

Query: 67  VTTKVF--VDQNSRNFRDMADVL-DISYDDFIR------------TTEKRHHDTCRILWK 111
              K    + +  +  R+ A+   +I  D+FIR            T    +  T    + 
Sbjct: 114 GKEKENIDIFKKRQLCREYAEKFINIQRDEFIRLGVFGYWDEPYITMSNEYEATIVKEFL 173

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                G +Y+G    ++         D EV  
Sbjct: 174 SFVKNGYVYRGKKPVYWCPSCVTALADAEVEY 205


>gi|34498124|ref|NP_902339.1| valyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81655316|sp|Q7NUM8|SYV_CHRVO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|34103979|gb|AAQ60339.1| valyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 939

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 126/393 (32%), Gaps = 77/393 (19%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV 230
             K +   ES     +P    N   +     ++D  +SR+   WG  I    D    +YV
Sbjct: 394 AAKAIEAVESGEVRFVPENWVNT-YNQWMKNIQDWCISRQ-LWWGHQIPAWYDEDGNIYV 451

Query: 231 -------------------------WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                    W  +     +T G+ +     KA    +++ V G 
Sbjct: 452 GRTEAEAQAKAGGKTLRREQDVLDTWFSSALVPFSTLGWPEETPDLKAFL-TSNVLVTGY 510

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE---- 319
           +I+ F    +       +  +P            H+G+K+SKS GNVIDP+++I+     
Sbjct: 511 EIIFFWVARMIMMTKHFTGKVPFKDVYIHGMVRDHEGKKMSKSEGNVIDPVDLIDGIALE 570

Query: 320 ---------------------------------VGVDALRYFLVREIACGKDGFYDKDGL 346
                                             G DALR+ +      G+   +D    
Sbjct: 571 PLVEKRTTGLRRPEKAPQIAKATEKLFPEGIPAYGTDALRFTMASYATLGRSVNFDFKR- 629

Query: 347 KKRVNADLANGIGNLVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
                 +  N + N  +R V M +  KD       P  ++  D+ I+    +   ++   
Sbjct: 630 -AEGYRNFCNKLWN-ATRFVMMNVDGKDCGQDESLPLEYSFVDQWIIGRLQQAEIDVTNA 687

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++      A   +   +     D Y +  K  +++  N  +        V V+     L 
Sbjct: 688 LETYRFDIAAQVIYEFIWNEYCDWYVELAKV-QIQGGNEAQQRATRRTLVRVLEVALRLN 746

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
              +P +  +++  +      +  +SL     P
Sbjct: 747 HPLMPFITEELWQTVAPLANAKKTESLMLAPWP 779



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
             +    I           H+GHA+   I D L RF+R+ G + L+  GTD  G      
Sbjct: 33  TSKPSFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRFYRMKGHNTLWVPGTDHAGIATQIV 92

Query: 60  -------KAAQNAGVTTKVFVDQNSRN-------FRDMADVLDIS--YDDFIRTTEKRHH 103
                  +      +  + F  +                  +  S  +D    T +    
Sbjct: 93  VERQLADQGLNRHDMGREAFTSKIWEWKEKSGGTITSQMRRVGCSVDWDREYFTMDDVRA 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +    ++ ++ ++G IY+G     +  +     +D EV    +  +      PV   +E
Sbjct: 153 EVVTEVFVRLYEQGLIYRGKRLSNWDAKLGTAISDLEVVSEEEDGHMWHIKYPVVGSDE 211


>gi|255263257|ref|ZP_05342599.1| leucyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105592|gb|EET48266.1| leucyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 697

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 6/206 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     A
Sbjct: 29  ETKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKTSTGHSVLHPMGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K +   N    +     L +S D      T +  ++   + L+  +  +G I
Sbjct: 89  AMAIGGHPKTWTYDNIEEMKRQMRPLGLSIDWSREFATCDPEYYGQQQALFLDMLAEGLI 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            V+  E   +FF++S Y ++LL  
Sbjct: 149 YRKNAMVNWDPVDMTVLANEQVIDG----RGWRSDALVERKELTQWFFKISDYSEELLDA 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLK 205
            ++  ++   +            GL+
Sbjct: 205 LDNLDDWPAKVRLMQSNWIGKSRGLQ 230


>gi|139436994|ref|ZP_01771154.1| Hypothetical protein COLAER_00128 [Collinsella aerofaciens ATCC
           25986]
 gi|133776641|gb|EBA40461.1| Hypothetical protein COLAER_00128 [Collinsella aerofaciens ATCC
           25986]
          Length = 858

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     AA
Sbjct: 40  SKPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGYDVLHPIGFDAFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N          +  SY  D  ++T    ++   + +++K+ +KG +Y
Sbjct: 100 IKHNTQAAAWTYKNMDQALATMKRMGFSYDLDRMVKTCSPDYYRWGQWIFEKLWEKGLVY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V +G             +  + E ++F+++ Y  +LL   
Sbjct: 160 RKKNPVNWCPNCKTVLANEQVTEGK----CWRCGTEPEKRDLEQWYFKITEYSQELLDDL 215

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           E  P +   +++          G
Sbjct: 216 EKLPGWPERVKQMQANWIGRSEG 238



 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 66/404 (16%), Positives = 140/404 (34%), Gaps = 43/404 (10%)

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T +  H +T        ++   +  G Y+G    +     ++ E    AD +        
Sbjct: 395 TIDTFHAETVDWDCAHAAEGTLVQSGKYTGMRGGKH----SEGEAAIVADLEAMGCGRRK 450

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL----KDLSLSRK 212
           V++     +      Y    +         I+P+      ++  ++      + L+  ++
Sbjct: 451 VEFR-LRDWLISRQRYWGNPIPAIHCEHCGIVPVPEDQLPVTLPENLDLGAGETLAECKE 509

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKFWPADLHVIG 264
            ++    +   P       +D  T          +P  ++         ++ P D ++ G
Sbjct: 510 FYETTCPVCGRPAKRETDTMDTFTCSSWYYLRYTDPHNTELPFSREAADRWMPVDNYIGG 569

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   F         LS + P    +         G+ +SKS GNV+ P  V
Sbjct: 570 IEHAILHLLYSRFFTKALRDLGLLSVDEPFTNLLCQGMVKDENGDTMSKSKGNVVPPSSV 629

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-G 375
           IE  G D +R  ++      KD  +D   ++       AN       R V  +++  D  
Sbjct: 630 IEPYGADTMRLAILFIAPPEKDFDWDPKAVEG------ANRFIKRAWRIVWQLVQSSDAN 683

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +     A  E    +     R + +  E+      + A++ V+ LV+    Y +A +   
Sbjct: 684 VAFDKSALDEVAMKLYRERHRTIAKCTEDFDRGQFNTAISAVMELVNAASAYLNATE--- 740

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILF 478
               + D+A     +   V + +  +L    P  A++++ + L 
Sbjct: 741 --GADRDKA-----LCYGVAKDIVSVLAPICPFWADELWHEALG 777


>gi|45190649|ref|NP_984903.1| AER043Cp [Ashbya gossypii ATCC 10895]
 gi|44983628|gb|AAS52727.1| AER043Cp [Ashbya gossypii ATCC 10895]
          Length = 873

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 5/210 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R  +Y+ +   YP+   HIGH     I+D L RF+R+ G +V+   G D  G     AA
Sbjct: 45  TRPHMYVLSMFPYPSGMLHIGHLRVYTISDALNRFYRMKGYEVVHPMGWDAFGLPAENAA 104

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN    +     +     +   + T +  ++   + L+ ++   G  Y
Sbjct: 105 LERGIAPADWTRQNIARMKQQKGDMLAHFEWGREVTTCDPEYYRFTQELFLELWHHGMAY 164

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V               V+  +   +F R++ +  +L    
Sbjct: 165 KKEAEINWDPVDKTVLANEQVDAQ---GRSWRSGALVEKRKLNQWFLRITRFAHELSHDL 221

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +    +   ++   +       G +    +
Sbjct: 222 DGLDGWPAKVKAMQKHWIGEVEGTEVRLCT 251



 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 74/193 (38%), Gaps = 27/193 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N  DP + I + G DA+R  ++ +        +D+  +          GI  
Sbjct: 626 EKMSKSKYNGADPAQCISKHGPDAIRAHILFQAPISDVVNWDETKIV---------GIER 676

Query: 361 LVSRSVSM---ILKDYDGMIPTPGAFTESDE-SILSVCSRVLQEIRENMQN-QLIHRALA 415
            ++R + +   +  D           T   E ++ +   ++L  I ++      ++  ++
Sbjct: 677 WLARIIKLAHTLAADSQLKHGPVAKLTNMHEIALFNEVQKLLGSITDSFSRTLSLNTVIS 736

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             + L + +D+        + K  NP          +   ++L  ++   VP ++ +  D
Sbjct: 737 DYMKLTNLLDQAL------KNKDINPA-------WLLTHFKKLVSVIHPTVPAVSEEAAD 783

Query: 476 ILFVADENRCFQS 488
           I+    +   +  
Sbjct: 784 IIKGHLQLLTWDH 796


>gi|72162555|ref|YP_290212.1| leucyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123760769|sp|Q47MY0|SYL_THEFY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71916287|gb|AAZ56189.1| leucyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 830

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 87/234 (37%), Gaps = 13/234 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + Y+     YP+   H+GHA    I DV+AR+H   G +VL   G D  G     AA 
Sbjct: 43  RPRRYVLDMFPYPSGDLHMGHAEAFAIGDVIARYHFARGENVLHPIGWDSFGLPAENAAI 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N     +      IS D    + T++  ++   +  + +  ++G  Y+
Sbjct: 103 KHNFHPAEWTYTNIETQAESFRRYAISLDWSRRLHTSDPEYYRWNQWFFLRFFERGLAYR 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +D+    +++V +G            V+      ++F+++ Y  +LL    
Sbjct: 163 KDGLVNWCPKDQTVLANEQVIQGK----CERCGTEVERRALNQWYFKITDYAQRLL---- 214

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
              +      +  E +  ++      S       + I+  ++P  +     D L
Sbjct: 215 --DDMEQLEGKWPERVLTMQRNWIGRSEGAD-VQFTIEGREEPVTVFTTRPDTL 265



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 30/280 (10%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           +++S        K   D              Y +        D  K   W P D +V G 
Sbjct: 490 VNVSCPRCGGPAKRDTDTMDTFVDSSWYFLRYCSPNLDTAPFDQEKVAKWGPIDQYVGGV 549

Query: 266 DILRFHAIYWPAF----LLSANLPLPK---KVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           +    H +Y   F         +P  +   ++ + G ++++G+ +SKSLGN +D  + I+
Sbjct: 550 EHAILHLLYSRFFTKVLYDMGMVPFTEPFVRLLNQGQVINQGKAMSKSLGNGVDLGQEID 609

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             GVDA+R  +V      +D   D   +    +          ++R+  ++ +      P
Sbjct: 610 RYGVDAVRLTMVFAGPPEEDI--DWADVSPGASVKF-------LNRAYRVMAEAAAASAP 660

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                T  D ++  +  + L ++ E ++ Q  + A+A+++ LV+   R  D         
Sbjct: 661 GVDPAT-GDLALRRMTHQTLAKVTEAVEAQRFNVAIARIMELVTAARRAID--------- 710

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + P  A   +    EVI     L   F P +A + +++L 
Sbjct: 711 SGPGAADPAVREAAEVIAITLGL---FAPYVAEEGWEMLG 747


>gi|84500590|ref|ZP_00998839.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391543|gb|EAQ03875.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 855

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 79/207 (38%), Gaps = 6/207 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  + K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     
Sbjct: 28  MPGKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVVARYKRATGHNVLHPMGFDAFGMPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA   G   + +   N          L  S D      T +  ++   + L+    +KG 
Sbjct: 88  AAMANGGHPRDWTYSNIDTMVGQMKPLGFSLDWTRMFATCDPEYYGQQQALFLDFLEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +Y+      +   D     +++V  G            V+  E   +FF++S   ++LL 
Sbjct: 148 VYRKNAVVNWDPVDMTVLANEQVEDG----RGWRSGALVERRELTQWFFKISDMSEELLD 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLK 205
             ++  ++   ++           GL+
Sbjct: 204 ALDTLDDWPAKVKTMQANWIGKSRGLQ 230



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 67/402 (16%), Positives = 128/402 (31%), Gaps = 66/402 (16%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--DKLLSYYESHPEFILPIERRNEV 196
            + Y G      +     V   ++E    RL   +    +      +P    P  R    
Sbjct: 431 RQRYWGCPIPVVHCDDCGVVPEKKENLPIRLPYDEGDKPIDFSIPGNPLDRHPTWRDTPC 490

Query: 197 ISFVKSGLKD-------LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
            S  K   ++       +  S     +     + P  +         +            
Sbjct: 491 PSCGKPAKRETDTMDTFVDSSWYFARFTAPRAETPTVMEDAEYWMNVDQYIGGIEHAILH 550

Query: 250 GSKAKFWPADLHVIGK--------------DILRFHAIYWPAFLLSANLPLPKKV--FSH 293
              ++F+   +H+ G                 +  HAIY            P+ V     
Sbjct: 551 LLYSRFFARAMHICGHLPEASKEPFDALFTQGMVTHAIYQTQKDGRPVYHYPEDVELKDG 610

Query: 294 GFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
              L  G         K+SKS  NV+DP+++I + G D  R+F++ +    +D  +   G
Sbjct: 611 KGFLEDGTEVEIIPSAKMSKSKNNVVDPVQIIADYGADTARWFVLSDSPPERDVEWTAAG 670

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                    A      + R   +     DG         E+DE ++    + + ++   +
Sbjct: 671 ---------AEAAAKHLGRVYRLASDLTDG----EAETDEADEHLMREMHKTVHDVTLGI 717

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
            +   + A+A++    +             + K+   RA +V       I+ LA L+   
Sbjct: 718 DSFGFNAAIAKLYGFTN------------TIAKS---RAGSVARRM--AIKTLAQLMSPM 760

Query: 466 VPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
            P LA +I+ +L    E    Q+   +  P  ++  T   PI
Sbjct: 761 TPHLAEEIWQMLG--GEGLISQAPWPKADPAMLVEDTVTMPI 800


>gi|319789620|ref|YP_004151253.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114122|gb|ADU96612.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 936

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 71/463 (15%), Positives = 143/463 (30%), Gaps = 25/463 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQ----NAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           +      ++      D++G+   +A +             + +  +    +     IS+ 
Sbjct: 336 YQVGLRYNLPVLVPVDDYGRFNQEAPEWLRGEKIWQANSLIIERLKESGHLLFAGTISHS 395

Query: 93  DFI--RTTEKRHHDTC-RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
                R   K       +           + +        ++    +    +    + + 
Sbjct: 396 YPHCWRCKGKVIFRATPQWFIAMDKGNPTLREVALKEIDRVQWIPQWGRTRIRNMVESRP 455

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                    W      F+     +             I   E  +       S L  L  
Sbjct: 456 DWCISRQRIWGVPIVAFYCKKCGEVIFSREIAERVAQIFEKESADAWYQKSCSEL--LPE 513

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G    +    I+ VW D+ +++                 WPADL++ G D   
Sbjct: 514 GFTCPKCGSTEFEKETDILDVWFDSGSSHAAVLERRP------ELTWPADLYLEGSDQHR 567

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F A    +       P    +     +  KG K+SKSLGNV+ P +V++  G D LR 
Sbjct: 568 GWFQASLLESCGTRGKAPYRAVLTHGFTLDEKGLKMSKSLGNVVSPTDVVKRYGADILRL 627

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           ++  E    +D     + L  R  A++   I N +   +  +       +       E D
Sbjct: 628 WVASEN-FTEDVRISDNIL--RGVAEVYKKIRNTIRFMLGNLNDFTPAQMLPYEELEEID 684

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP--DR 443
           +  L+   +++ E+ E+  N   +R   ++    S      Y D  K   L   +P   +
Sbjct: 685 KWALNRFHQLVNEVVEHYNNYRFNRIYRRIYEYCSVELSSVYLDILKD-TLYCEHPRSKK 743

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +      +++  L  LL   +   A + +  L   ++   F
Sbjct: 744 RRSAQTAIYQILYGLITLLAPIISFTAEEAYSHLPGREKESVF 786



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 15/143 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N   HIGHA   I+ D++ +   L G    F  G D HG  I +A   
Sbjct: 51  EKFVLHDGPPYANGHIHIGHALNKILKDIVNKSKALQGYQTPFVPGWDCHGLPIERAVFK 110

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             + +  Q     R+    L +   +++   T + ++       
Sbjct: 111 KLKKRKHEVDPLEVRKKCREYAKQWIETQREEFIRLGVVGDWNNPYITMDPKYQADIVRE 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRD 132
             K  +KG +Y+     ++    
Sbjct: 171 LGKFYEKGLVYRAKKPVFWCPSC 193


>gi|146300033|ref|YP_001194624.1| valyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146154451|gb|ABQ05305.1| valyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 877

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 133/411 (32%), Gaps = 24/411 (5%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                ++  G   +        L D+ +   +E+ K A           +     E  + 
Sbjct: 332 KTETHLNKVGTSERTKAVIEPRLSDQWFLKMEELVKPAIKSVLETGEIKLHPKRFENTYA 391

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLSLSRKTFDWGIKIP 221
                        +      +P     +           +  LK                
Sbjct: 392 HWLNNIRDWNISRQLWWGQQIPAYYYGDGKEDFVVAENIEDALKLAQAKTNNKQLTTDNL 451

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPD-GSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
                 +  W  +    ++  G + +P+      ++P +  V G DIL F    +    +
Sbjct: 452 KQDVDALDTWFSSWLWPMSVFGGIMDPESPDFKYYYPTNDLVTGPDILFFWVARMIIAGY 511

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +   P      +      K  K+SKSLGN  DP+++I++   D +R  L+   + G D
Sbjct: 512 EYAGEKPFTNVYLTGLVRDKKRRKMSKSLGNSPDPLDLIDKFSADGVRVGLLLSASAGND 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
             +D++   +           N +  +  +I   +    I  P +   + E   +   + 
Sbjct: 572 IMFDEELCSQG------KAFSNKIWNAFKLIKGWEVSETIAQPESSKVAIEWYEAKLQQT 625

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           L +I +N +   I  +L  +  LV +     + +  KP   +  +    S      +E++
Sbjct: 626 LVDIEDNFEKYRISDSLMAIYKLVWDDFCSWFLEMIKPAYQQPID----SVTFAKAIEML 681

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
                LL  F+P L  +I+ ++     +E     +  +       L   F+
Sbjct: 682 ENNLKLLHPFMPFLTEEIWQLIAERTPEEALIVSTWPEVKPFDAKLIADFE 732



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 46/158 (29%), Gaps = 18/158 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           R    I           H+GH     I DVL R  RL G +  +  GTD           
Sbjct: 33  RTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKVV 92

Query: 62  --------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
                          +        + D+      +    L  S D      T +     +
Sbjct: 93  AKLKAEGINKNDLTREEFLKHAWEWTDKYGGTILEQLKKLGASCDWERTKFTMDPDMSAS 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +  + +KG IY+G     +    +   +D+EV  
Sbjct: 153 VIKSFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIY 190


>gi|313199869|ref|YP_004038527.1| valyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439185|gb|ADQ83291.1| valyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 948

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 120/376 (31%), Gaps = 61/376 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H       +     ++      + L+       
Sbjct: 401 PENWVNTYNQWLNNIQDWCISRQLWWGHQIPAWYTDSGKVYVAHDADEAQALAAKDGYTG 460

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS-----KAKFWPADLHVIGKDILRF 270
              K+  D   ++  W  +     +T  +  +           ++ P+ + V G DI+ F
Sbjct: 461 ---KLKRDDD-VLDTWYSSALWPFSTLDWTGDEAVDAANQALQQYLPSSVLVTGFDIIFF 516

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------- 319
               +      L+  +P             +G+K+SKS GNV+DPI++I+          
Sbjct: 517 WVARMVMMTTHLTGKIPFKHVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGIDLDALIKK 576

Query: 320 ----------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                                        G DALR+      + G+D  +D    +    
Sbjct: 577 RTTGLMNPKDAEKIEKRTRKEFPEGISAYGTDALRFTFASLASPGRDIKFDLQRCEG--Y 634

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGA-------FTESDESILSVCSRVLQEIREN 404
            +  N + N  +R V M  +  D  +            F+++D  I+S+  +V  +I   
Sbjct: 635 RNFCNKLWN-ATRFVLMNTEGQDCGLEDCKTKPEGYLSFSQADRWIVSLLQKVEADIERG 693

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +         +   V +   D Y +  K      T  ++ +T     + V+  +  L 
Sbjct: 694 FADYRFDLIAQSIYKFVWDEYCDWYLEIAKTQLQTGTEAEQRAT-RRTLLRVLETVLRLA 752

Query: 463 QAFVPKLANKIFDILF 478
              +P +  +I+  + 
Sbjct: 753 HPIMPFITEEIWQTVG 768



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            + +   I           H+GH +   I D L R+HR+ G + L+  GTD  G      
Sbjct: 42  SKSDNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGDNTLWQPGTDHAGIATQIV 101

Query: 60  -----------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K +     ++  R +    D S + F  T +  
Sbjct: 102 VERQLDAQGVSRHDLGREKFLEKVWEWKEYSGGTITQQMRRLGTSPDWSRERF--TMDAG 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +      + ++ ++G IY+G     + ++     +D EV +  +       + P+
Sbjct: 160 LNKVVTESFVRLYNEGLIYRGKRLVNWDVKLGTAVSDLEVVQDEEDGSMWHINYPL 215


>gi|168025691|ref|XP_001765367.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683420|gb|EDQ69830.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 906

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D++AR+ R+ G +VL   G D  G    +
Sbjct: 57  TTKPKYYVLDMFPYPSGAGLHVGHPEGYTATDIMARYKRMRGFNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +    +N   FR     L  SYD    I TTE  ++   + ++ ++  +G 
Sbjct: 117 YAIQTGTHPRETTLKNIDRFRSQLKSLGFSYDWQREISTTEPDYYKWTQWIFLQLFKRGL 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +        +++EV  G          +PV       +  +++ Y D+L+ 
Sbjct: 177 AYEAEVAVNWCPALGTVLSNEEVIDG----LSERGSHPVIRKPMRQWMLKITQYADRLVE 232

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 233 DLDDLDWPESIKDMQRNWIGRSE 255



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 73/182 (40%), Gaps = 33/182 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI+P +++ E G D+LR + +          +  +G++         G+  
Sbjct: 671 HKMSKSRGNVINPDDIVSEYGADSLRLYEMFMGPLRDVKIWSTNGVE---------GVHR 721

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R+  +++         P     +D    +  L    + + ++ E + N   + A+A 
Sbjct: 722 FLGRAWRLVVGSALPGGGYPEHTLATDGAPSKEQLRALHQCISKVTEEIDNMRFNTAIAA 781

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++  ++  +++ D  K                    EV+    +LL    P +A +++  
Sbjct: 782 MMEFINVANKWTDRPK--------------------EVLEPFVLLLSPLAPHIAEELWCR 821

Query: 477 LF 478
           L 
Sbjct: 822 LG 823


>gi|119385489|ref|YP_916545.1| leucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|189030294|sp|A1B5Q5|SYL_PARDP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119375256|gb|ABL70849.1| leucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 844

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 6/216 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y+     YP+ + H+GH     + DV+ARF R  G  VL   G D  G     AA
Sbjct: 28  ERPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARFKRAQGFSVLHPMGWDAFGMPAENAA 87

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   + +   N    R     L +S D      T +  +    + L+  + + G I 
Sbjct: 88  MEQGGHPRDWTYGNIATMRGQLKPLGLSIDWSREFATCDDAYVAQQQALFLDMLEAGLIT 147

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G   +        V+  E   +FF++S Y D+LLS  
Sbjct: 148 RKSAQVNWDPVDMTVLANEQVIDGKGWRSGAT----VERKELTQWFFKISDYSDELLSAL 203

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +    +   +            GL+    +    D+
Sbjct: 204 DGLEGWPEKVRLMQANWIGKSRGLQFRFHTVDLPDF 239



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 117/378 (30%), Gaps = 94/378 (24%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G      A    LL    S      P+ R          
Sbjct: 429 WGISRQRYWGCPIPVVHCDACGTVPEAKANLPVLLPQDVSFEVPGNPLNRHPT------- 481

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPAD 259
                  +      G     +    M  ++D+   Y   T         +     +   D
Sbjct: 482 -----WAATTCPKCGGPARRETD-TMDTFVDSSWYYARFTSPHAATPTDRPETDYWMNVD 535

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKGE---- 301
            ++ G +    H +Y      A + + +LP            + + +H   + + E    
Sbjct: 536 QYIGGIEHAILHLLYSRFFARAMVKTGHLPESAKEPFDALFTQGMVTHEIYMTRDERGRP 595

Query: 302 -------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                    K+SKS  NV+DP+ ++E  G D  R+F++ +    
Sbjct: 596 VYHLPEDVVDGKLADGTPVEVIPSAKMSKSKKNVVDPVNIVEGFGADTARWFMLSDSPPE 655

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G      A+ AN     V R    I +D             +D  +     R
Sbjct: 656 RDVEWTAAG------AEAANRFLARVWRLADEIPEDG------------ADPDLTRAAHR 697

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + E+   ++    ++A+A++  L + + +                R         E +R
Sbjct: 698 AIDEVTRAIEGFAFNKAVAKIYELANAIAK--------SGAGGESRR---------EALR 740

Query: 457 QLAILLQAFVPKLANKIF 474
            +A L+   VP LA +I+
Sbjct: 741 IMAQLMAPMVPHLAEEIW 758


>gi|312622414|ref|YP_004024027.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202881|gb|ADQ46208.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 920

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 116/305 (38%), Gaps = 23/305 (7%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G    +    IM VW D+ +++             +   WP D+++ G D     F
Sbjct: 516 CLVCGCSEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    A       P    +     +  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 570 QSSLLTAVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDE 388
                  D    KD +K+    ++   I N   R +   L D++      G     E D+
Sbjct: 630 SADYTT-DMRISKDIIKQL--TEIYRKIRNTA-RFLLGNLYDFNPKTDKVGYENLKEIDK 685

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRAS 445
             L    ++++++ +  +    ++    V +   +   + Y D  K      K+      
Sbjct: 686 WALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRR 745

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFML 499
           +   V  E++  L  L+   +   A +I+  +   +E+        + S+++ +     L
Sbjct: 746 SAQTVMYEILIALTKLIAPILSFTAEEIWQNIIFKEEDAESVFLTSWPSINEDILRDEAL 805

Query: 500 HKTFD 504
            + +D
Sbjct: 806 REKWD 810



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLHGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R     L +   +++   T + +     
Sbjct: 105 VIKKLGVNRHEIDPVEFRKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTY 207


>gi|282900674|ref|ZP_06308616.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194474|gb|EFA69429.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 860

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y  +   YP+   H+GH     I DV+AR  R+ G  VL   G D  G     A
Sbjct: 32  KNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYRVLHPMGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    R     L +S D    + T    ++   + ++ +    G  
Sbjct: 92  AIDRGVPPAKWTYQNIDQMRQQLKRLGLSLDWEAEVATCSSDYYRWTQWIFLQFLAAGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+      +F +++AY ++LL+ 
Sbjct: 152 YQKEAAVNWDPIDQTVLANEQVDAE---GRSWRSGAIVERKMLRQWFLKITAYAEELLND 208

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E  P +   +           +G
Sbjct: 209 LEHLPGWPERVRIMQANWIGKSTG 232



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 22/177 (12%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN + P +VI + GVD  R F++ +    KD  +D+  ++ +      N +  LV
Sbjct: 619 MSKSKGNGVAPEDVISKYGVDTARMFILFKAPPEKDLEWDEADVEGQFR--FLNRVWRLV 676

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLV 421
           +   +M +             T+ ++ +       ++ I E+++     + A+++++ L 
Sbjct: 677 NDYANMGVCG---KKVDLEKLTKEEKDLRRTTHLAIKAITEDVEDEYQFNTAISELMKLS 733

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + +                  +      +  E I+ L I+L  F P +A++++  L 
Sbjct: 734 NAL---------------TDGKCHN-SPIYAEGIKNLVIMLAPFAPHIADELWSSLG 774


>gi|255514065|gb|EET90328.1| valyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 813

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 122/326 (37%), Gaps = 13/326 (3%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +   ++E +    R   +   +  +Y S   +I+P  R +  I          S   K 
Sbjct: 379 FDWCDYIEWDWNISRNRVFGTPIPFWYCSDCGYIIPASRDSLPIDPK----VQPSPESKC 434

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
              G       +    VW+D+    L   G+ +N D    + +PA + + G DI+R  A 
Sbjct: 435 PSCGSNNIQGEEKTCDVWVDSSITPLIIAGWPENKD-LMNRAFPASIRIQGTDIIRTWAF 493

Query: 274 Y--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           Y  +   +L  + P    + S       G ++ KS GN +DP ++I +  +D++R +   
Sbjct: 494 YTIFRTSILGGDKPFEAIITSGMIQGTDGREMHKSFGNGVDPKDLIAKYSIDSVRLWAAL 553

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               GKD  +  + ++          + N       ++ ++        G F   D  IL
Sbjct: 554 SGNIGKDKRFSYEDIE--FAKSFIIKLYNSSLFIKKILAENKLPEKEPHGHFGVFDLWIL 611

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR--ASTV 447
           +  + V+ ++ +      +++A+   I+       D Y +  K     +           
Sbjct: 612 NRLNDVVAQVDKAYSEYDLYQAMNAAIAFYWHEFCDYYIENVKYRVYSEDKKIEGSKEAA 671

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKI 473
           ++    V+  +  +L   +P  A +I
Sbjct: 672 IFTLYHVMNVMLRVLAPVMPHAAEEI 697



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I T     N   H+G A+ +   D +AR+ R+ G +VL+  G D  G  +   
Sbjct: 27  RSKPLYVIDTPPPNTNGDLHMGQAFWISYIDAIARYKRMKGFNVLYPQGWDTQGFPVELQ 86

Query: 62  AQNA--GVTTK--------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRIL 109
            +     +T +         F ++N +  +     L  S+D      T    +    ++ 
Sbjct: 87  VEKQYGKITNQKDFYDRCVEFANKNIQKMKAQMIELGASFDERYEYITMSPEYRKKIQLS 146

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              + DK  +Y+  +   +    ++  + +EV +  +    N     ++  EE
Sbjct: 147 LLLMHDKKMLYRANHPVEWCPHCKSSISREEVEEKENTTNLNHVRFELRGKEE 199


>gi|257784636|ref|YP_003179853.1| leucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473143|gb|ACV51262.1| leucyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 857

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 74/204 (36%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R K Y+     YP+   H+GHA    I D +AR  R+ G DVL   G D  G     A
Sbjct: 43  SSRPKKYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFDVLHPMGFDAFGLPAENA 102

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A        V+  +N          +  +Y  D    T +  ++   + ++ K+ +KG +
Sbjct: 103 AIKHNTQPSVWTHKNIDQAVKTMFRMGFAYDKDRMFNTCDPEYYKWGQWIFLKMLEKGLV 162

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G             +  E   ++ R++ Y  +LL  
Sbjct: 163 YRATSPVNWCPNDKTVLANEQVVNGK----CWRCGAVPEKRELSQWYLRITDYAQELLDD 218

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 219 LDQLEGWPERVRAMQANWIGRSEG 242



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 105/341 (30%), Gaps = 38/341 (11%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL----KDLSLSRKTFD 215
                +      Y    +          +P+      +    +        L+  ++  +
Sbjct: 453 FRLRDWLISRQRYWGNPIPMIHCDCCGDVPVPYDQLPVMLPDNLDLAAGDTLAECKEFVE 512

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKFWPADLHVIGKDI 267
                   P   +   +D  T          +P  ++         ++ P D ++ G + 
Sbjct: 513 TTCPKCGKPAKRITDTMDTFTCSSWYYLRYCDPHNTELPFSKESVDRWMPVDNYIGGIEH 572

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y   F        ++  + P    +         G+ +SKS GNV+ P  VIE 
Sbjct: 573 AILHLLYSRFFTKVLRDLGMIDIDEPFKNLMTQGMVKDEHGDTMSKSKGNVVPPSSVIEP 632

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
            G D +R  ++      KD  +D+  +        AN       R V  + +  D     
Sbjct: 633 YGADTMRLAILFVAPPEKDFDWDEKAIAG------ANRFIKRAWRVVWELSRTADASAVL 686

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
              A       +  V + +             + A++ V+ LV+    Y +      +  
Sbjct: 687 DHTALDSKSLELNRVLNAMGIRCTTEFDKGQFNTAISAVMELVNAASAYINE-----VPA 741

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI-FDILF 478
            + D A     +  +V   +  +L   +P  A ++  + L 
Sbjct: 742 ESRDAA-----LCYKVANDVVAMLAPIIPHWAEELSHEALG 777


>gi|238916006|ref|YP_002929523.1| isoleucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871366|gb|ACR71076.1| isoleucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 1116

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 56/418 (13%), Positives = 123/418 (29%), Gaps = 30/418 (7%)

Query: 80  FRDMADVLDISYDD---FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136
                D   I Y     FI+ T+               +     K       ++    + 
Sbjct: 462 HCWRCDTPLIYYARESWFIKMTDPEVKA----------NLIANNKTINWIPETIGTGRFG 511

Query: 137 NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
              E  +            P+   + E     +S    + L     +    + + R    
Sbjct: 512 AWLENVQDWGISRNRYWGTPLNIWQCEDCGEMMSIGSIEELKEKSDNCPDNIELHRPYVD 571

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               K      ++ R               ++  W D+ +       Y         + +
Sbjct: 572 AVTCKCPKCQGTMKRV------------PEVIDCWFDSGSMPFAQHHYPFENKELFEQQF 619

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PA       D     F+++   + LL    P    +         G+K+SKS GN +DP 
Sbjct: 620 PAKFISEAVDQTRGWFYSLLAISTLLFNKAPYENVIVLGHVQDADGQKMSKSKGNAVDPF 679

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + +++ G DA+R++     A      +  + + +     +           +   + ++D
Sbjct: 680 DALQKHGADAIRWYFYENSAPWVPNRFKDEWVSEGQRKFMGTFWNTYAFFVLYANIDNFD 739

Query: 375 GMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ 431
                      +  D+ +LS  + +++ +  N++N  I      +     E+ + Y    
Sbjct: 740 ATKYQLEYDKLSVMDKWLLSKLNSLVKFVDNNLENYKITETARALEDFTDELSNWYVRRS 799

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +     K                +  LA +    VP +   I+  L  + +     S+
Sbjct: 800 RERFWAKGMEQDKINAYMTLYTTLVTLAKISAPMVPFMTESIYRNLVCSIDKNAPISI 857



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE             N +PHIGH    +I D++ R+  + G  V    G D HG  +   
Sbjct: 87  KEGPTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELE 146

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D +  +      D+   T +   
Sbjct: 147 VEKMLGLDGKEQIEEYGIEPFIKHCKESVWKYKGMWEDFSSTVGFWADMDNPYVTYDNNF 206

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG +YKG     Y  R     +  EV +G  
Sbjct: 207 IESEWWALKQIWDKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 250


>gi|116515200|ref|YP_802829.1| LeuS [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|122285404|sp|Q057G3|SYL_BUCCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116257054|gb|ABJ90736.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 847

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 6/290 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE++K Y    + YP+ + H+GH     I+DV++RFHR+ G +VL   G D  G    + 
Sbjct: 31  KEKKKFYCLPMLPYPSGKLHMGHVRNYTISDVISRFHRMLGKNVLQPIGWDSFGLPAEET 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    ++ K +  +N +  +     L  SYD    I T    ++   ++ + K+  K  I
Sbjct: 91  AIKNNISPKKWTFKNIKTMKKQLQSLGFSYDWNKEITTCNPEYYRWEQLFFIKLFKKKLI 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +  +D+    +++V KG            ++  +   +F ++  Y DK L  
Sbjct: 151 YKKKSIVNWCEKDKTVLANEQVQKG----VCWRCGTKIKLRKISQWFIKIKKYADKFLKD 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +   ++   +    +       GLK      K   +       P+ IM +   A++ Y 
Sbjct: 207 LKLLKKWPKEVISMQKNWIGKSKGLKIKCKIYKKKYFLKIFTTKPETIMGISFFAISMYH 266

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKK 289
                    +    KF   + + I  +  + + ++     L    P+ KK
Sbjct: 267 PLINLFLRKNIEIQKFLKKNKYSINTEFQKSNILFGINTHLYVIHPINKK 316



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 79/196 (40%), Gaps = 24/196 (12%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N IDP+ +I++ G D+LR F++          ++   +           I N 
Sbjct: 607 KMSKSKNNGIDPVNIIKQYGADSLRLFIMFAAPINISLEWNSKNIIGMHR--FLKKIWNF 664

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V      I+              ++ ++ +   + +++++  N+Q +   + A+A++I  
Sbjct: 665 V-----FIIIKKKKEKIKKIDLNKNKKTYIYKLNTIIKKVTYNIQERNSFNTAIAEIIKF 719

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + + + +   K + +KK N           +  I  +  +L  F P +   ++  ++  
Sbjct: 720 FNYLVKLY---KIYNIKKKN----------LIFCISTIIKMLYPFTPHICFILWKKIYGK 766

Query: 481 D---ENRCFQSLDQRL 493
               E   +   +++ 
Sbjct: 767 KSCIEKETWPKFNKKF 782


>gi|157164498|ref|YP_001466839.1| valyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801275|gb|EAT98619.1| valyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 918

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 75/368 (20%), Positives = 132/368 (35%), Gaps = 55/368 (14%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y     N V+    + + F      D+ +           P    N   +     L+D  
Sbjct: 390 YCYRCKNVVEPYISKQW-FVKKEIADEAIQKVSEGLAKFYPPHWIN-SFNAWMRELRDWC 447

Query: 209 LSRKTFDWGIKI-----------------------------PDDPQYIMYVWIDALTNYL 239
           +SR+   WG +I                               DP  ++  W  +     
Sbjct: 448 ISRQ-LWWGHQIPVFYCDDCGHMWADEGEPCECKKCKSKNIHQDPD-VLDTWFSSGLWPF 505

Query: 240 TTTGYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
           +T G+ +          +G  A+F+P +L + G DIL F    + +        LP    
Sbjct: 506 STLGWGNENELKNVKWFEGDLAEFYPNNLLITGFDILFFWVARMMFQGENALGKLPFDDI 565

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                     G K+SKSLGNVIDP++ I E   D LR+ L      G+D       +K+ 
Sbjct: 566 YLHALVKDEFGRKMSKSLGNVIDPLDSINEYSADVLRFTLTLLAVQGRDIKLSDAKMKQV 625

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N    N + N  S+ + +    +  +       T+    + S  +  ++E+REN+    
Sbjct: 626 RN--FTNKLYN-ASKYLMLNESKFPNLE-DIKLQTKLGIYMNSRFNECVREVRENIDAYR 681

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A   +   +       D    W ++ +  D+AS  +     + ++   LL  F+P L
Sbjct: 682 FNDAANTLYKFLW------DEFCDWGIELSKADKAS--VKELGSIFKEAMKLLNPFMPFL 733

Query: 470 ANKIFDIL 477
           +  +F  L
Sbjct: 734 SEYLFQEL 741



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 62/190 (32%), Gaps = 22/190 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K  I           HIGHA    + D++ R+ R+DG   L+  G D  G      
Sbjct: 34  KDGRKFCIMMPPPNVTGSLHIGHALTFTLQDIMTRYKRMDGYKTLWQPGLDHAGIATQNV 93

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI----SYDDFIRTTEKR 101
            +                        + +++          L I    S   F  T ++ 
Sbjct: 94  VEKQLLAQGIKKEELGREKFVEKVWEWKEKSGGMIVHQMRKLGITPAWSRQRF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                +  +  + DKG I +  Y   +   D A  + +  +K   G+ Y+ ++       
Sbjct: 152 LRRAVKKAFVNLYDKGLIVQKNYMINWCTHDGALSDIEVEHKENKGKLYHLRYYFADGQN 211

Query: 162 EEGYFFRLSA 171
            E Y   +S 
Sbjct: 212 LENYQAEVSH 221


>gi|320535205|ref|ZP_08035331.1| isoleucine--tRNA ligase [Treponema phagedenis F0421]
 gi|320147943|gb|EFW39433.1| isoleucine--tRNA ligase [Treponema phagedenis F0421]
          Length = 1086

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/478 (15%), Positives = 147/478 (30%), Gaps = 34/478 (7%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    G  E    + K +    +       + ++   D   +     D  I    K    
Sbjct: 347 VHTAPGFGEEDNLVFKDSGVPVICPIDAECKFTQEVSDYQGMFVKDADKLIMERLKSEGK 406

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE- 163
                 + +      ++      Y      + + +++ +            P        
Sbjct: 407 LV-KREQILHAYPHCWRCSSPLIYRAIGSWFVSVEKIKENLLKANEQITWQPAHIKNGRF 465

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS-----RKTFDWG 217
             +      +      Y+ +        +    +    +  L+ LS +      K F   
Sbjct: 466 GKWLEGARDWAISRNRYWGNPLPIWKCPDCGKTICVGSREELEKLSGTYPEDLHKHFVDR 525

Query: 218 IKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
           I IP            ++  W ++ +       Y           +PAD    G D    
Sbjct: 526 ITIPCACGGTMQRIPEVLDCWFESGSMPYAQEHYPFERKEYFEAHFPADFISEGLDQTRG 585

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +   A  L         V +   +   G+K+SKSL N  DP  V+ E G DALR F
Sbjct: 586 WFYTLTVLAAALFDKPAFQNCVVTGLVLAADGKKMSKSLRNYTDPNTVVNEFGADALRLF 645

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL--------------KDY 373
           L+        D  Y  +G++  + + L   + N  S  V+                 KD 
Sbjct: 646 LMHSSVVKADDLKYSDEGVRDVLKSILIP-LWNSYSFYVTYANIDKVTPPAHAKLDGKDK 704

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                        D  ILS+  +++ ++   M    + +A+  ++S + +++ ++  +  
Sbjct: 705 GIKEFLSHVTNPLDRWILSITEKLVFDVTAAMDAYDLSKAIDPIVSYIDQLNNWYIRRSR 764

Query: 434 WELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
               K+  D   +         I++  ++    VP +   I+  L   ++       D
Sbjct: 765 RRFWKSENDGDKAQAYETLYRAIKKFTLVAAPVVPFITETIWQNLRTDEDPESVHLAD 822



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 19/162 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  ++        +    PH GH     I D++ R+  + G  V    G D HG  +   
Sbjct: 36  KGAKEYVFFDGPPFATGLPHFGHFVPSTIKDIIPRYKTMQGHKVERRFGWDCHGLPVENL 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +  + +R+    L   + +D+  +T E  +
Sbjct: 96  IEQELGLNSKTDIETYGIDKFNEACRESVLRYVKEWRETITRLGRWVDFDNDYKTMEPAY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + K++ +KG +Y+G Y   Y  R     ++ E+  G
Sbjct: 156 MESIWWIMKQLWEKGLLYEGHYILPYCPRCSTVLSNHELNLG 197


>gi|313114987|ref|ZP_07800480.1| leucyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622678|gb|EFQ06140.1| leucyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 849

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +FR     L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKNNVDHFRSQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    ++EV  G          + V    +  +  +++AY DKL+  
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNG----VCERCGSEVVHRVKSQWMLKITAYADKLIDG 204

Query: 180 YESHPEFILPIERRNEVI 197
            +          ++   I
Sbjct: 205 LDGLDYIERVATQQKNWI 222



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 74/183 (40%), Gaps = 37/183 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P EV+++ G D +R + +      +   +    +          G    
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLYEMFMGDFEQAAPWQTSAI---------AGCNRF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  ++  K  +G    P   T        +  + ++++  +++   ++ A+AQ+++LV
Sbjct: 675 LDRVWTLSDKLVEGEGYRPQVET--------LMHQTIKKVGADIETLKMNTAIAQLMTLV 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +             L        +         +  +  LL  F P +  ++++ L  + 
Sbjct: 727 NA------------LYDNGGATKAE--------LETVVQLLNPFAPHMTEELWEKLGHSH 766

Query: 482 ENR 484
           + +
Sbjct: 767 DEQ 769


>gi|118602065|ref|YP_903280.1| leucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231641|sp|A1AV52|SYL_RUTMC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118567004|gb|ABL01809.1| leucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 816

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 6/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +EK Y  +   YP+   H+GH     I DV++R+ ++ G +V+   G D  G     A
Sbjct: 30  TSKEKYYCLSMFPYPSGSLHMGHVRNYSIGDVISRYQKMQGKNVMQPIGWDGFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V+   +  +N    RD    L   YD    I T  ++++   + L+ K+ +K  +
Sbjct: 90  ALENKVSPAKWTYENIDYMRDQLSKLGFGYDWSREIATCHQKYYRWEQWLFIKLFEKDLV 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D+    +++V  G         +  ++  +   +F R++ Y D+L+  
Sbjct: 150 YKKNAIVNWDPVDQTVLANEQVIDG----RGWRSNALIEKKKISQWFMRITNYADELIYG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            +    +   ++   +       GL
Sbjct: 206 LDKLDGWPDAVKTMQKNWIGKSVGL 230



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 34/275 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPA----DLHVIGKDILRFHA 272
           K+       +  + ++   +   T   +N       A +W A    D ++ G +    H 
Sbjct: 478 KMAQQETDTLDTFFESSWYFARYTCKDNNDKMLDKRANYWLANGGVDQYIGGIEHAILHL 537

Query: 273 IYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
           +Y   F         +  + P  K + + G +L  G K+SKS GN +DP ++IE+ G D 
Sbjct: 538 LYARFFNKLLRDEGFIKNDEPF-KNLLTQGMVLKDGAKMSKSKGNTVDPAQMIEKYGADT 596

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +R F++      ++  +   GL+        N +  L+   +  I       I T   F 
Sbjct: 597 VRLFILFAAPPTQNLEWSDSGLEGVHR--FINKVYRLI---MDFIQDHKSHAIGTLNNFD 651

Query: 385 ESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           ++ + I     + L +I +NM    L +  +A ++ L + + ++ D  K           
Sbjct: 652 KAQKDIRLKTHQTLSKITDNMSRRYLFNTVIAALMKLCNTLSKFNDTSK----------- 700

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             T + +  E I  L   L    P L + ++  L 
Sbjct: 701 --TSMAIRQESIHILLKTLSPIAPHLCHYLWKKLG 733


>gi|15791020|ref|NP_280844.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236770|ref|YP_001689970.1| isoleucyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74568871|sp|Q9HN97|SYI_HALSA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10581609|gb|AAG20324.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727836|emb|CAP14624.1| isoleucine--tRNA ligase [Halobacterium salinarum R1]
          Length = 1070

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 18/267 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW+D+      T  Y +  D    + WPADL +   D     F +          ++
Sbjct: 530 VFDVWLDSSVASWGTLNYPEQED-DFDELWPADLIMEAHDQTRGWFWSQLGMGTAALGDV 588

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +      +  G  +SKS G  I+P EVI+E G D +R FL+     G D  +  D
Sbjct: 589 PYEEVLMHGYANMPDGRGMSKSKGITIEPNEVIDEYGADPMRMFLLSVTPQGDDMSFSWD 648

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------------TPGAFTESDESILS 392
             +  +  DL             M L D+D  +P                    DE +LS
Sbjct: 649 ETEN-MQRDLNILWNVFRFPRPYMALDDFDANVPAAFGGDDAGVGIADADLETVDEWLLS 707

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVT 451
               V  +   + ++   HRAL  V+  V E + RY+       + + +   + T  Y T
Sbjct: 708 RLQHVKADATAHWEDFEQHRALDAVLEFVVEDLSRYYVQVVRERMWEDDASASKTAAYAT 767

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDIL 477
           ++ V+ ++  LL  + P +  +++  L
Sbjct: 768 MQRVLLEVVALLAPYAPFVTEELYSHL 794



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  +      Y +   H+G  +   + D   R+HR+ G DV    G D HG  I    
Sbjct: 39  DAETFFFVDGPPYTSGAAHMGTTWNKTLKDAYIRYHRMQGYDVTDRPGYDMHGLPIETKV 98

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F D N    +       +   +D+  +T +  + 
Sbjct: 99  EEQLGFESKKDIQEFGEEAFIEECKRFADDNLDGLQSDFQSFGVWMDWDNPYKTVDPSYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     + ++ D G + +G  S     R E    ++EV  
Sbjct: 159 EAAWWAFSEVHDNGLVERGQRSISQCPRCETAIANNEVEY 198


>gi|152993621|ref|YP_001359342.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425482|dbj|BAF72985.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 813

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI +   +P+ + H+GH     I D  AR++R    +VL   G D  G     AA
Sbjct: 29  EQKKKYILSMFPFPSGRLHMGHVRNYAIGDAFARYYRKQNFNVLHPIGWDAFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N    R   + L +S+       T +  +    +    ++ +KG +Y
Sbjct: 89  IKHGRHPKEWTYSNIDYMRKELNTLGLSFSKTREFATCDPLYTKHEQKFIIEMFEKGLLY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +         +++V +G          N V+  E  GY+  +  Y D+LL   
Sbjct: 149 RESTTVNWCESCHTVLANEQVEEG----CCWRCDNEVELKEMPGYYLDIIKYADELLDDL 204

Query: 181 -ESHPEFILPIERRNEVISFVKSGL 204
            +   ++   +            GL
Sbjct: 205 AQLEGKWPSQVIAMQRNWIGKSQGL 229



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 110/343 (32%), Gaps = 50/343 (14%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----------GLKDLSL 209
            +   +      Y    + +       ++P ++ N  ++                     
Sbjct: 416 YKLRNWGVSRQRYWGAPIPFVHCPNCGLVPEKKENLPVALPDDVEITGEGNPLENHPTWK 475

Query: 210 SRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIG 264
                  G     +      ++   W                 D   A +W   D ++ G
Sbjct: 476 HCSCPKCGADAIRETDTLDTFVQSSWYQFRYATNPKKWEEVGIDKDDANYWLGVDQYIGG 535

Query: 265 KDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   F            + P   ++ + G +L  G K+SKS GN +DP  +
Sbjct: 536 IEHAILHLLYARFFTKVLRDLGHHDIDEPFT-RLLTQGMVLMDGAKMSKSKGNTVDPDAL 594

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D  R F++      K+  ++   ++          + +  S+    +L D D  
Sbjct: 595 VEKYGADTARLFILFAAPPQKELEWNDSAVEGAFR--FIKKLYDRKSKVTGNMLIDIDHS 652

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWE 435
                  ++  +         LQ+  +  ++    +  +A  +  ++ +D+         
Sbjct: 653 G-----LSKESKLARVKVYEALQKSTDVYESTFAFNTLIAACMEALNALDK--------- 698

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + N D       V  E +  +  LL+  +P +  ++ + LF
Sbjct: 699 --QDNGD-------VWAEGMYIMLNLLEPIIPHVTAELSEQLF 732


>gi|289616640|emb|CBI56590.1| unnamed protein product [Sordaria macrospora]
          Length = 1043

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 129/415 (31%), Gaps = 93/415 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                + ++ M  E ++ R+    +  L   E     I P    N+      + ++D  +
Sbjct: 446 CEKSKDVIEPMMTEQWWVRMKEMGEAALQVVEEGKVKISPESA-NKSYKRWLADIQDWCI 504

Query: 210 SRKTFDWGIKIP---------------------------------------------DDP 224
           SR+   WG +IP                                              DP
Sbjct: 505 SRQ-LWWGHRIPAYRVIFEGEEGQREHEKSEWIVGRTQEEAQAKAEAKFAGRKFTLEQDP 563

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
              +  W  +    +   G+ +  +    KF+P  +   G DIL F    +   +  ++ 
Sbjct: 564 D-CLDTWFSSGLWPMAILGWPNTENLDFKKFFPTSMLETGWDILFFWVARMIMLSLKMTG 622

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------- 317
            +P  +          +G K+SKSLGNVIDP+++I                         
Sbjct: 623 EVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIIRGIELEDLHAKLLVGNLKEDEVARA 682

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DA+R+ L+     G D  +D             N I       
Sbjct: 683 TKYQKTAFPGGIPECGADAMRFTLLSYTTGGGDINFDIK--VMHAYRRFCNKIWQATKYV 740

Query: 366 VSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           +  + +++           +  ++ IL   +  ++ + + ++ +   RA         + 
Sbjct: 741 LGKLPQEFVPKAELDVANLSVPEKWILHRMNVAVKGMNDALEAREFSRATKVAYQFFYDE 800

Query: 424 -VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D + +  K   L    P+   +V       I     LL   +P +  +++  L
Sbjct: 801 LCDVFIENSK-GILSDGTPEEQQSVQQTLYHTIDVALRLLHPIMPYITEELWQRL 854



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 42/145 (28%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I           H GHA    + D L R++R+ G + L+  G D  G       +  
Sbjct: 121 KFVIPLPPPNVTGALHCGHALANSLQDTLIRWYRMKGYETLWVPGCDHAGISTQSVVEKM 180

Query: 66  GVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +     +   +   ++  S D      T +K      
Sbjct: 181 LWKKEKKIRQELGREKFTELVWEWKGDYHQRINNAQKLMGGSMDWEREAFTMDKNLTAAT 240

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              + ++ D+G IY+      +   
Sbjct: 241 METFCRLHDEGLIYRSNRLVNWCTH 265


>gi|255725760|ref|XP_002547809.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240135700|gb|EER35254.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 921

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 86/204 (42%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E  Y  +   YP+   H+GH     I+DV+ARF RL+G +V+   G D  G     A
Sbjct: 57  SDAETFYSLSMFPYPSGVLHLGHLRVYTISDVVARFKRLNGYNVIHPMGWDAFGLPAENA 116

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    + + N    +   ++   D  ++  + T+   ++   + ++  + ++G  
Sbjct: 117 AVERNINPAEWTEMNIAKMKQQTEIFLADFDWEREVNTSSPEYYKWTQKIFLMLFERGLA 176

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V   ADG+ + +    V+    + +F R++ Y  +L   
Sbjct: 177 YRNYSEINWDPVDQTVLANEQV--DADGRSWRSGA-IVEKKFLKQWFIRITEYAKELNHD 233

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   ++   +      +G
Sbjct: 234 LKYLNNWPSKVKTMQKNWIGESTG 257



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 73/196 (37%), Gaps = 24/196 (12%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADL 354
               EK+SKS  N +DP E I + G D +R  ++          + ++ +    R    +
Sbjct: 652 NVSFEKMSKSKYNGVDPAECIGKYGADVVRAQMLFSAPVSDTLNWQEEQIAGTDRWLRRV 711

Query: 355 ANGIGNLVSRSV---------SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                N+V  +          S +    +G       FT  +  + +     +Q I +++
Sbjct: 712 IQLSDNIVGATYKLDEQTAPHSFMGLTLNGKTYDNIKFTSEELKLYNEIQSYVQSITKSI 771

Query: 406 Q-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           + +  ++  ++ ++ + + +               +P++ +    +  +  ++L + +  
Sbjct: 772 EVDFSLNTVISDLMKMTNAISNAV----------KSPEQFN--QDLVFDCYKKLLVCMAP 819

Query: 465 FVPKLANKIFDILFVA 480
             P  + + ++   + 
Sbjct: 820 VTPATSEECWERFSIN 835


>gi|219685566|ref|ZP_03540382.1| valine--tRNA ligase [Borrelia garinii Far04]
 gi|219672844|gb|EED29867.1| valine--tRNA ligase [Borrelia garinii Far04]
          Length = 549

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 138/376 (36%), Gaps = 43/376 (11%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E  +  D         +       ++      +F  +    +K L   ES      P + 
Sbjct: 2   EKGFLQDVKKHRQQVGHCYRSGEVIEPYLSTQWFVSMKPLAEKALKALESGELRFYPKKW 61

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIP-----------------------------DD 223
            N    +  S +KD  +SR+   WG +IP                              D
Sbjct: 62  ENT-YKYWLSNIKDWCISRQLV-WGHRIPAWYNIDTLELIISDTDPSLDEKNVGKRFVQD 119

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     ++ G+ +        ++P +  +   DI+ F    +       +
Sbjct: 120 PD-VLDTWFSSWLWPFSSLGWPNITV-DFENYYPTNTLITAYDIIFFWVARMVMAGLEFT 177

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             +P      +      +G K+SKSLGN IDP+++I E G D+LR+ L      G+D   
Sbjct: 178 GQIPFRDVYITPLLRDKQGRKMSKSLGNGIDPLDIIHEYGSDSLRFTLSFLSVQGQDLNI 237

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D       + A  AN + N  S+ + + L++ +        F + D+ +L+  +  +  +
Sbjct: 238 DAKDFM--LGAKFANKVFN-ASKFILLNLENREVFNDLK--FNDIDKWLLTSLNSTILGV 292

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
             +  N   + A   V         D Y +  K  +L   N D  +  +   +  +++  
Sbjct: 293 ESSFANYKYNEASKFVYEFFWNDFCDWYIEISK-IDLNSENVDIQNMAISKLLFFLKKAL 351

Query: 460 ILLQAFVPKLANKIFD 475
           ++L  F+P +  KI+ 
Sbjct: 352 LILHPFIPFVTEKIYS 367


>gi|148377404|ref|YP_001256280.1| valyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291450|emb|CAL58835.1| Valyl tRNA synthetase (Valine tRNA ligase)(VALRS) [Mycoplasma
           agalactiae PG2]
          Length = 829

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 146/389 (37%), Gaps = 45/389 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                +           E      E    ++  Y    + PV+ +    +F ++      
Sbjct: 310 HDLTREQAREQISKYLKENNLIVKEEKTVSNVGYSERSNAPVETLVMPQWFVKMDTLAKN 369

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--------------- 220
           +  + +S  +     +R  + ++     + D ++SR+   WG +I               
Sbjct: 370 VTEHLKSDDQVKFYPKRFIKTVNNWLKNIHDWTISRQ-LWWGHRIPAWYKDNEIKVQVDS 428

Query: 221 ----PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                     ++  W  +     +  G+  + +  K +++P  L V G DI+ F    +Y
Sbjct: 429 PGEGWVQDSDVLDTWFSSGIAPFSFLGWPASDELLK-RYYPTSLLVTGYDIIFFWVVRMY 487

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +     +   P    +        +  K+SKSL N +DP ++IEE G DALR+FLV    
Sbjct: 488 FFGLEFTGKKPFETVLLHGLVRDEQNRKMSKSLNNGVDPSKIIEEYGSDALRFFLVTNST 547

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +  + +  RV   L N + N+  R + M+  D +         + +D  I +  
Sbjct: 548 PGLDTRFSLEKV--RVAWGLCNKLWNIA-RYIDMLDDDSNFKP------SAADIWINNKL 598

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             +  +I + M    +  A  ++ + +       Y +  + +  KK             +
Sbjct: 599 KHLQNKITKAMNRYELTVAGTELSNFIYNDFSSWYIELLRIYPNKK-----------YAL 647

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E +R+L I+   F+P + + ++  ++  +
Sbjct: 648 ENLRKLLIITHPFLPFVTDYLYQSIYKTE 676



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +           HIGHA +  I D + RF +L+G D  +  G D  G       
Sbjct: 33  TKKPFSLLLPPPNVTGALHIGHALDQHIQDTILRFKKLEGYDTFYIAGMDHAGIATQSKV 92

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +   + T                   + ++ +  FR    +L I   ++    T +K  +
Sbjct: 93  ERILMETEGVNKHTLGREKFLERIWEWKEEYANKFRKQWHLLGIGLDFERERFTLDKLSN 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSL 130
           D    ++ ++ ++G IYK   +  +  
Sbjct: 153 DAVNKVFIELYNRGLIYKDTKAVNWDP 179


>gi|160946011|ref|ZP_02093237.1| hypothetical protein FAEPRAM212_03544 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443742|gb|EDP20747.1| hypothetical protein FAEPRAM212_03544 [Faecalibacterium prausnitzii
           M21/2]
          Length = 849

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRKNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +FR     L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKSNVDHFRSQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    ++EV  G          + V    +  +  +++AY DKL+  
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNG----VCERCGSEVVHRVKSQWMLKITAYADKLIDG 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 74/177 (41%), Gaps = 37/177 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P EV+++ G D +R + +      +   +    +          G    
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLYEMFMGDFEQAAPWQTSAI---------AGCNRF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  ++  K  +G    P        ++ ++  + ++++  ++++  ++ A+AQ+++LV
Sbjct: 675 LDRVWALSDKLVEGEGYRP--------AMETLMHQTIKKVSADIESLKMNTAIAQLMTLV 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + +                  +A             L  LL  F P +  ++++ L 
Sbjct: 727 NAM-----------YDNGGATKAE---------FETLVQLLNPFAPHMTEELWEKLG 763


>gi|295103261|emb|CBL00805.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii SL3/3]
          Length = 849

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       DV++R  R +G +VL+  G D  G      
Sbjct: 29  KKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRKNGYNVLYPMGWDAFGLPTENF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +FR     L  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 89  AMKNHIHPAIVTKSNVDHFRSQLKALGFSFDWDREINTTDPEYYKWTQWIFLQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +    +    ++EV  G          + V    +  +  +++AY DKL+  
Sbjct: 149 YKKEMNVNWCTGCKCVLANEEVVNG----VCERCGSEVVHRVKSQWMLKITAYADKLIDG 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 77/183 (42%), Gaps = 37/183 (20%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNVI+P EV+++ G D +R + +      +   +    +          G    
Sbjct: 624 KMSKSLGNVINPDEVVDQYGADTMRLYEMFMGDFEQAAPWQTSAI---------AGCNRF 674

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R  ++  K  +G    P        ++ ++  + ++++  ++++  ++ A+AQ+++LV
Sbjct: 675 LDRVWALSDKLVEGEGYRP--------AMETLMHQTIKKVSADIESLKMNTAIAQLMTLV 726

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + +                  +A             L  LL  F P +  ++++ L  + 
Sbjct: 727 NAM-----------YDNGGATKAE---------FETLVQLLNPFAPHMTEELWEKLGHSH 766

Query: 482 ENR 484
           + +
Sbjct: 767 DEQ 769


>gi|221640308|ref|YP_002526570.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782511|sp|B9KMH8|SYL_RHOSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221161089|gb|ACM02069.1| Leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 847

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 83/236 (35%), Gaps = 11/236 (4%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N  + R     L +S D      T +  ++   + ++  + + G +Y+
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMFIDMMEAGLVYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G           PV   E   +FFR+S Y  +LL   +
Sbjct: 151 KNAVVNWDPVDMTVLANEQVIDGKG----WRSGAPVVRRELTQWFFRISDYAGELLEALD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +  ++   +            GL+    +      G     D   +     D L  
Sbjct: 207 TLKDWPEKVRLMQANWIGQSRGLQFAFSTA-----GAPEGFDRLEVYTTRPDTLMG 257



 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 127/411 (30%), Gaps = 92/411 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L    S      P++R          
Sbjct: 427 WGISRQRYWGCPIPVIHCETCGVVPEAKENLPVRLPDDVSFDVPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PAD 259
                         G K   +    M  ++D+   Y            D  +A +W   D
Sbjct: 480 -----WRDCTCPKCGAKARRETD-TMDTFVDSSWYYARFTAPRAATPTDAEEADYWMNVD 533

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKGE---- 301
            ++ G +    H +Y      A   + +LP            + + +H   L +      
Sbjct: 534 QYIGGIEHAILHLLYSRFFARAMQKTGHLPAKAIEPFNALFTQGMVTHEIYLTRDAAGRP 593

Query: 302 -------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                    K+SKS  NV+DP+ +I + G D  R+F++ +    
Sbjct: 594 VYHLPEDVTDGKLADGTPVEIIPSAKMSKSKKNVVDPMNIIRQFGADTARWFVMSDSPPE 653

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G +              + R   +     D +    G     D ++    +R
Sbjct: 654 RDVEWTASGAEAA---------SKHLHRVWRLA----DEISRADGEANAEDGALDKATAR 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + E+ + ++    ++A+A++    + + R                + +         +R
Sbjct: 701 AIAEVTQGVEGFAFNKAIAKLYEFTNTLSR--------SGAGAEAKKRA---------MR 743

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
            +A L+   VP LA +++ +L    E    Q+   +  P  ++  T   PI
Sbjct: 744 TMAQLMSPMVPHLAEEVWAMLG--GEGLVAQAAWPKADPALLIDDTVTLPI 792


>gi|320583657|gb|EFW97870.1| Mitochondrial leucyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 850

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K+Y +    YP+   H+GH     IADVLARF+R+ G +V+   G D  G     AA
Sbjct: 35  TKGKIYSTAMFPYPSGILHMGHLRVYTIADVLARFYRMQGYNVINPMGWDAFGLPAENAA 94

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V+ + +   N    +   + +  D  +D  + T +  ++   + L+  + + G  Y
Sbjct: 95  VDRNVSPEKWTKLNISKMKVQMEAMLADFDWDREVTTCDPAYYKWTQKLFLLMYEHGYAY 154

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V               V+    E +F  ++ +  +L +  
Sbjct: 155 RKKAEINWDPVDQTVLANEQVDSE---GRSWRSGAVVEKRLLEQWFLGITKFAKELNADL 211

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++  E+   ++          +G
Sbjct: 212 DTLDEWPAKVKAMQRNWIGESTG 234



 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 75/180 (41%), Gaps = 20/180 (11%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N  DP + I   G DA R  ++ +        +D+D +           + 
Sbjct: 603 FEKMSKSKHNGADPSDCIARHGADATRAHVLFQAPIEDVLNWDEDKIVGIE-----RWLA 657

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRENMQN-QLIHRALAQV 417
            +++ +  +  +  + + P P    T+S+ S+ + C ++L  I +++     ++  ++  
Sbjct: 658 KVLTIAGGLRERLKEPVQPKPTDLYTKSEISVHNECQQLLHSITDSLSKSLSLNTVISDY 717

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +      ++ +           N D ++ VLYV+      L   L    P ++ +  ++L
Sbjct: 718 MKY---TNKIYSEL-------NNKDVSTAVLYVSY---LDLLKALSPVAPSVSEEANEVL 764


>gi|298207085|ref|YP_003715264.1| isoleucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849719|gb|EAP87587.1| isoleucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 1134

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 100/271 (36%), Gaps = 9/271 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           ++ VW D+ +       Y           W  AD    G D     F+ ++  A ++  +
Sbjct: 604 LIDVWFDSGSMPYAQFHYPFENKRLVETTWRKADFIAEGVDQTRGWFYTLHTIATMIFDD 663

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +     V +   +   G+K+SK LGN +DP E +   G DA R++++       +  +D 
Sbjct: 664 VAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFETLSVYGPDATRWYMISNANPWDNLKFDI 723

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQE 400
           +G+++ V       + N  S        D   YD          E D  ILS    ++++
Sbjct: 724 EGIEE-VRRKFFGTLYNTYSFFSLYANLDGFTYDENPIPLEQRPEIDRWILSELHSLIKD 782

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +     +    RA   +   V E   + +    +    K        +      E +  +
Sbjct: 783 VDSYYNDYDATRATRAISEFVQENLSNWFVRLSRRRYWKGDYETDKISAYQTLFECLLTV 842

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
           + L     P   +K++  L +A     F+S+
Sbjct: 843 SKLGAPVSPFFMDKLYRDLIMASNKEPFESV 873



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 19/148 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +           N  P + H     I D+  R+  + G  V    G D HG  I    
Sbjct: 39  DNKPFIFFEGPPSANGLPGVHHVLARSIKDIFPRYKSMKGFQVKRKAGWDTHGLPIELGV 98

Query: 63  QNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +     TK  +                  + +  + D+ + +   +  +D   T + ++ 
Sbjct: 99  EKELGITKEDIGTKISVEDYNKACKKAVMRYTDVWNDLTEKMGYWVDMEDPYVTYKSKYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
           +T   L  +I  KG +YKG     YS +
Sbjct: 159 ETVWWLLSQIYSKGLLYKGYTIQPYSPK 186


>gi|291525516|emb|CBK91103.1| isoleucyl-tRNA synthetase [Eubacterium rectale DSM 17629]
 gi|291528375|emb|CBK93961.1| isoleucyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 1055

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 96/287 (33%), Gaps = 6/287 (2%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           +++ K  + G  +   P+ ++  W D+         Y         K +PA       D 
Sbjct: 512 AVTIKCPECGKDMHRVPE-VLDCWFDSGAMPFAQHHYPFENKEVFEKQFPAKFISEAVDQ 570

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               FH++   + LL    P    +         G+K+SKS GN +DP + +E  G DA+
Sbjct: 571 TRGWFHSLMAESTLLFNKAPYENVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAI 630

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAF 383
           R++     A      +    + +     +           +   + ++D           
Sbjct: 631 RWYFYTASAPWIPKKFSGKLVLEGQRKFMGTLWNTYAFFVLYANIDNFDATKYSLEYDKL 690

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPD 442
              D+ ILS  +  +  + E + N  I  A   +   V ++ + Y    +     K    
Sbjct: 691 AVMDKWILSKLNSAVAGVDECLSNYKIPEAAKYLQEFVDDLSNWYVRRSRERFWAKGMEQ 750

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                       +  ++      +P +   I+  L  + +    +S+
Sbjct: 751 DKINAYMTLYTALVTISKAAAPMIPFMTEDIYRNLVCSIDKSAPESI 797



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH     I D++ RF  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVETRTIKDMIPRFQTMKGKYVPRKAGWDTHGLPVEIE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D ++ +      D+   T +   
Sbjct: 96  VEKLLGLDGKDQIENYGLEPFIKKCKESVWKYKGMWEDFSNTVGFWADMDNPYVTYDDNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 199


>gi|94984674|ref|YP_604038.1| leucyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|122986695|sp|Q1J0W5|SYL_DEIGD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94554955|gb|ABF44869.1| leucyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 819

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 76/195 (38%), Gaps = 6/195 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  T   YP+   HIGH Y  +  D  AR+ R+ G +V F  G D  G     AA
Sbjct: 40  SKTKHYALTMFPYPSGNLHIGHWYANVAPDAHARWMRMRGYNVFFPMGFDAFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N  +       +   I +   + T +  ++   +  + +   +G  Y
Sbjct: 100 IKHGLNPATWTSSNIEHMLGQFKRMGTMIDWSRSLATCDPEYYRWNQWFFTEFFRRGLAY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +  +D+    +++V  G           PV+      ++ +++ Y ++LL + 
Sbjct: 160 KKDGLVNWCPKDQTVLANEQVVDG----RCERCGTPVERRNLSQWYLKITDYAEELLDFR 215

Query: 181 ESHPEFILPIERRNE 195
           ++     +   + N 
Sbjct: 216 DTDMPERVRAMQTNW 230



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 124/364 (34%), Gaps = 55/364 (15%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKDLS 208
            P        +      Y    +           P+          E + F+ +G   L 
Sbjct: 418 KPKTTYRLRDWLVSRQRYWGTPIPIVYCPDHGAQPVPADQLPVKLPENVEFMPTGQSPLK 477

Query: 209 LSRKTFDWGIKIPDDP----QYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFWPADLH 261
           L R+       +   P       M  ++D+      YL+        D + A   P DL+
Sbjct: 478 LDREWMRATCPVCGGPAERDTDTMDTFVDSSWYMYRYLSPHDDQHPFDPAHANLLPVDLY 537

Query: 262 VIGKDILRFHAIY---WPAFLLSANLPLPKKVFS-----HGFILHKGEKISKSLGNVIDP 313
             G +    H +Y   W   +    L +  + F+        +   GEK+SKS GNV+DP
Sbjct: 538 TGGIEHAILHLLYSRFWTKVMRDMGLTVQNEPFARLRNQGIILGEDGEKMSKSRGNVVDP 597

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++ E G D +R +L+        G +D  G+         NG    +SR  ++    +
Sbjct: 598 DDLVREYGADTVRTYLMFIAPWELGGPWDPSGI---------NGPAKWLSRVWAL---YF 645

Query: 374 DGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           D     P     E+D  +       L+++  + +    +  +A ++ L +          
Sbjct: 646 DEKAAGPEEKIGEAD--LRYAVHSTLKKVGADYERMSFNTIIAALMELTN---------- 693

Query: 433 PWELKKTNPDRASTVLYVTV--EVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQS 488
              L K    + S V       E +     +L    P +A +I+      +    + + +
Sbjct: 694 --TLVK---AKRSPVFGTPAWEEALDIFNRMLAPVAPHIAEEIWRERGGTESVHLQAWPA 748

Query: 489 LDQR 492
           +D+ 
Sbjct: 749 VDEA 752


>gi|325982822|ref|YP_004295224.1| valyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532341|gb|ADZ27062.1| valyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 920

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/393 (16%), Positives = 126/393 (32%), Gaps = 77/393 (19%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
               V+ M  + ++  + +   + L           P      V +     ++D  +SR+
Sbjct: 355 TQTIVEPMLTDQWYVAMDSLTKRGLEAVAEGEIKFTPDNWT-HVYNQWLENIQDWCISRQ 413

Query: 213 TFDWG--IKIPDDPQY-------------------------IMYVWIDALTNYLTTTGYL 245
              WG  I    D                            ++  W  +     +T G+ 
Sbjct: 414 -LWWGHRIPAWYDEDGNVVVAHNLEEAQKLSGSSTLKQDDDVLDTWFSSALWPFSTLGWP 472

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
           D     K    P  + + G DI+ F    +   +   +  +P  +   +      +G+K+
Sbjct: 473 DETPELKTFL-PTSVLITGFDIIFFWVARMVMMSLHFTNKIPFKEVYITGLIRDAEGQKM 531

Query: 304 SKSLGNVIDPIEVIEE-------------------------------------VGVDALR 326
           SKS GNV+DP+++I+                                       G DALR
Sbjct: 532 SKSKGNVLDPLDLIDGITLPDLIAKRTTGLMNPKQAESIEKNTRKHFPEGIQAFGTDALR 591

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFT 384
           +      + G+D  +D    +     +  N + N  +R V M    KD       P +++
Sbjct: 592 FTFASLASHGRDIKFDLQRCEG--YRNFCNKLWN-ATRFVLMNCESKDTGLDESLPLSYS 648

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD 442
            +D+ I+S   +  Q I              ++  LV +   D Y +  K  +L      
Sbjct: 649 AADQWIISRLQQAEQAIELAFTQYRFDLLAREIYELVWDEYCDWYVELAKV-QLNNQQDS 707

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    V V+  +  L    +P +  +++ 
Sbjct: 708 VHRATRRTLVRVLEAILRLAHPIIPFITEELWQ 740



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R    I           H+GHA++  + D L R+HR+ G + L+  GTD  G      
Sbjct: 32  ENRSAYCIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMRGYNTLWQPGTDHAGIATQIV 91

Query: 60  ----------KAAQNAGVTTKVFVDQNSR--------NFRDMADVLDISYDDFIRTTEKR 101
                     K  Q    T    V Q             R M    D + + F  T +  
Sbjct: 92  VERQLDQQNLKRQQMGRETFLERVWQWKEESGSTITRQMRRMGTSCDWTRERF--TMDDG 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                  ++ ++  +G IY+G     +    +   +D EV    +  +      P++  +
Sbjct: 150 LSRAVTEVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLEVVATEENGWLWHIRYPLEQAD 209


>gi|195011623|ref|XP_001983237.1| GH15697 [Drosophila grimshawi]
 gi|193896719|gb|EDV95585.1| GH15697 [Drosophila grimshawi]
          Length = 871

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 11/231 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  K Y+ +   YP+   H+GH     I+D +ARFHR+ G +V    G D  G     A
Sbjct: 59  QKSNKYYVLSMFPYPSGNLHMGHVRVYSISDAVARFHRMCGKNVFQPIGWDSFGLPAENA 118

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    +  QN    +   + L  S+D    + T+   ++   + L+  +  +G  
Sbjct: 119 ANQRGVAPAEWTQQNIGQMKQQLERLGCSFDWSHELSTSSPEYYKWTQSLFLMLHKQGLA 178

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    D++V          A+   V+    + +F R SAY  +LL  
Sbjct: 179 YQNEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLKQWFIRTSAYAKQLLDG 235

Query: 180 Y------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                  +      L      E   +  + L   S   + +    +   DP
Sbjct: 236 LDDPTLRDWRDIINLQRHWIGECNGYAFTLLTSASNLLRVWTANPEHLKDP 286



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 109/391 (27%), Gaps = 88/391 (22%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEV------ISFVKSGLKDLSLSRKTFDWGIKI 220
           +R+S+     L   + +    +PI    +          +   L      +         
Sbjct: 390 YRVSSKLQDWLISRQRYWGTPIPIVHCPKCGAVPVPEQQLPVTLPPRDAGKDALRCECPK 449

Query: 221 PDDPQ-----YIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFH 271
            DDP        M  ++D+   YL      +            F P DL++ GK+    H
Sbjct: 450 CDDPHAQRETDTMDTFVDSSWYYLRYLDAHNTESIFDLTLAKNFMPVDLYIGGKEHAVLH 509

Query: 272 AIYWPAFLLSAN--------LPLPKKVF-------------------------------- 291
             Y        +         P  + +                                 
Sbjct: 510 LYYARFMNHFLHNCGLSPTSEPFSRLLVQGMVMGRSYRVKGSGRYVRESEVEIVNAKKNQ 569

Query: 292 -----SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                S   ++   EK+SKS  N ++P ++  E G D  R  ++ ++A      +     
Sbjct: 570 AVLKGSQEPVVMSWEKMSKSKLNGVEPDDMFNEYGTDTTRLIILADVAPTSHRNWSSATF 629

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
              +N      +     R+        D +      F E D  +    +  ++    N +
Sbjct: 630 PGILNWQKRLWLTMEEFRAAREDYA-TDAVDTASAVFREDDAKLFDARNFYVKGATFNYR 688

Query: 407 -NQLIHRALAQVISL---VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
               +  A++++  L   +    ++  +           +RA               I+L
Sbjct: 689 HAHQLSVAISKMQGLTNSIRRTPKHIQSH------GKQFERALAAQ----------IIML 732

Query: 463 QAFVPKLANKIFD-------ILFVADENRCF 486
               P  A++++         L V  E   +
Sbjct: 733 APMAPHFASELWSKFVAVPGRLNVESEELRW 763


>gi|255531150|ref|YP_003091522.1| valyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344134|gb|ACU03460.1| valyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 887

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 113/361 (31%), Gaps = 19/361 (5%)

Query: 122 GCYSGWYSLRDEAYYNDDE--VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                      E   N D   + +     Y +   N   W      ++            
Sbjct: 360 CKMDQMAKPALEDVLNGDVKLIPEKFVNTYRHWMENVRDWNISRQLWWGQQIPAWYDNQG 419

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                +           +   +        +         I  DP  +M  W  +    +
Sbjct: 420 NWVVAKTKEEALDEFLKLKDPEGQFTAEEKAGCKNQLAAFIKQDPD-VMDTWFSSWLWPI 478

Query: 240 TTTG-YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    + +  +     ++P +  V   +IL F    +           P      +    
Sbjct: 479 SVFDGFKNPDNKDINYYYPTNDLVTAPEILFFWVARMIMAGHEFRGQKPFTNVYLTGIVR 538

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DPI +IE+ G D +R  ++     G D  +D+   ++    + AN
Sbjct: 539 DKLGRKMSKSLGNSPDPIGLIEKYGADGVRVGMLLCSPAGNDLMFDESYCEQ--GRNFAN 596

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N        ++K ++          ++     +  +  L EI +N +   +  AL  
Sbjct: 597 KIWNAFR-----LVKGWEVEPALENPNQQAILWFENRFNEALAEIEDNFKQYRLSEALMA 651

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              LV +     Y +  KP      + +        T+    ++  LL  F+P +  +++
Sbjct: 652 TYKLVWDDFCAWYLEMVKPAYQHPVDAETLKA----TIAFFEKILTLLHPFMPFITEELW 707

Query: 475 D 475
            
Sbjct: 708 H 708



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 48/157 (30%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRKARMQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      D    L  S  +D    T E    D
Sbjct: 92  VAMLKERGINKADISREEFLKYAWEWKEKYGGIILDQLKKLGASCDWDRTRFTMEDDLSD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                +  +  KG IY+G     +    +   +D+EV
Sbjct: 152 AVIDSFIHLYKKGWIYRGIRMVNWDPAGKTAVSDEEV 188


>gi|89070618|ref|ZP_01157898.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043765|gb|EAR49967.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 857

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ +  G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKATGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N          L    D      T +  ++   + L+    D G +Y
Sbjct: 90  MASGGHPKDWTYGNIDTMVGQMKPLGFGLDWSRMFATCDPEYYGQQQALFLDFLDAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S   D+LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVIDGKG----WRSGAEVERRELTQWFFKISDMADELLEAI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +   ++   ++           GL+
Sbjct: 206 DGLDDWPAKVKLMQANWIGRSRGLQ 230



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 83/194 (42%), Gaps = 31/194 (15%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP ++I   G D  R+F++ +    +D  +   G         A+     
Sbjct: 628 KMSKSKNNVVDPADIISRYGADTARWFVLSDSPPERDVEWTASG---------ADATHKH 678

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   +  +  D     P     +DE++L    + + E+ + +++   + A+A++ +  
Sbjct: 679 LARVYRIASEVSDAPEAGPNG---ADEALLKAMHKCIFEVTQGIESFGFNAAIAKLYAFT 735

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +             L+K++  R +       +  R LA L+    P L+ +I+ +L    
Sbjct: 736 A------------TLQKSDAGREAK-----RQAARTLAQLMAPMTPHLSEEIWHMLGGEG 778

Query: 482 --ENRCFQSLDQRL 493
               + + + D+ +
Sbjct: 779 LLAEQPWPTADEAM 792


>gi|238923433|ref|YP_002936949.1| isoleucyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875108|gb|ACR74815.1| isoleucyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 1055

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 96/287 (33%), Gaps = 6/287 (2%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           +++ K  + G  +   P+ ++  W D+         Y         K +PA       D 
Sbjct: 512 AVTIKCPECGKDMHRVPE-VLDCWFDSGAMPFAQHHYPFENKEVFEKQFPAKFISEAVDQ 570

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               FH++   + LL    P    +         G+K+SKS GN +DP + +E  G DA+
Sbjct: 571 TRGWFHSLMAESTLLFNKAPYENVIVLGHVQDENGQKMSKSKGNAVDPFDALETYGADAI 630

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAF 383
           R++     A      +    + +     +           +   + ++D           
Sbjct: 631 RWYFYTASAPWIPKKFSGKLVLEGQRKFMGTLWNTYAFFVLYANIDNFDATKYSLEYDKL 690

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPD 442
              D+ ILS  +  +  + E + N  I  A   +   V ++ + Y    +     K    
Sbjct: 691 AVMDKWILSKLNSAVAGVDECLSNYKIPEAAKYLQEFVDDLSNWYVRRSRERFWAKGMEQ 750

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                       +  ++      +P +   I+  L  + +    +S+
Sbjct: 751 DKINAYMTLYTALVTISKAAAPMIPFMTEDIYRNLVCSIDKSAPESI 797



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE E           N +PHIGH     I D++ RF  + G  V    G D HG  +   
Sbjct: 36  KEGETYTFYDGPPTANGKPHIGHVETRTIKDMIPRFQTMKGKYVPRKAGWDTHGLPVEIE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V +    + D ++ +      D+   T +   
Sbjct: 96  VEKLLGLDGKDQIENYGLEPFIKKCKESVWKYKGMWEDFSNTVGFWADMDNPYVTYDDNF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG +YKG     Y  R     +  EV +G  
Sbjct: 156 IESEWWALKEIWNKGLLYKGFKIVPYCPRCGTPLSAQEVAQGYK 199


>gi|77464417|ref|YP_353921.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123744224|sp|Q3IZL4|SYL_RHOS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77388835|gb|ABA80020.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 847

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N  + R     L +S D      T +  ++   + ++  + + G +Y+
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMFIDMMEAGLVYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G           PV   E   +FFR+S Y  +LL   +
Sbjct: 151 KNAVVNWDPVDMTVLANEQVIDGKG----WRSGAPVVRRELTQWFFRISDYAGELLEALD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLK 205
           +  ++   +            GL+
Sbjct: 207 TLKDWPEKVRLMQANWIGQSRGLQ 230



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 127/411 (30%), Gaps = 92/411 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L    S      P++R          
Sbjct: 427 WGISRQRYWGCPIPVIHCETCGVVPEAKENLPVRLPDDVSFDVPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PAD 259
                         G K   +    M  ++D+   Y            D  +A +W   D
Sbjct: 480 -----WRDCTCPKCGAKARRETD-TMDTFVDSSWYYARFTAPRAATPTDAEEADYWMNVD 533

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKGE---- 301
            ++ G +    H +Y      A   + +LP            + + +H   L +      
Sbjct: 534 QYIGGIEHAILHLLYSRFFARAMQKTGHLPAKAIEPFNALFTQGMVTHEIYLTRDAAGRP 593

Query: 302 -------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                    K+SKS  NV+DP+ +I + G D  R+F++ +    
Sbjct: 594 VYHLPEDVTDGKLADGTPVEIIPSAKMSKSKKNVVDPMNIIRQFGADTARWFVMSDSPPE 653

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G +              + R   +     D +    G     D ++    +R
Sbjct: 654 RDVEWTASGAEAA---------SKHLHRVWRLA----DEISRADGEANAEDGALDKATAR 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + E+ + ++    ++A+A++    + + R                + +         +R
Sbjct: 701 AIAEVTQGVEGFAFNKAIAKLYEFTNTLSR--------SGAGAEAKKRA---------MR 743

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
            +A L+   VP LA +++ +L    E    Q+   +  P  ++  T   PI
Sbjct: 744 TMAQLMSPMVPHLAEEVWAMLG--GEGLVAQAAWPKADPALLIDDTVTLPI 792


>gi|212546259|ref|XP_002153283.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210064803|gb|EEA18898.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 996

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K YI +   YP+   H+GH     I+DVL+RF+++ G DVL   G D  G     AA
Sbjct: 92  DRPKSYILSMFPYPSGTMHMGHLRVYTISDVLSRFYKMRGHDVLHPIGWDAFGLPAENAA 151

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  QN    +         +D    + T     +   + ++  + +KG  Y
Sbjct: 152 IERGVQPAEWTVQNIERMKVQLRSFGPGFDWERELMTCSPEFYKHTQRIFLMLYEKGLAY 211

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V   A+G  + +    V+ ++ + +FFR++A++++LL   
Sbjct: 212 QAEALVNYDPVDKTVLANEQV--DANGFSWRSGAK-VEQLKLKQWFFRITAFKEELLKDL 268



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 35/195 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP+  +E+ G D  R  ++      +   +D+  +              
Sbjct: 704 EKMSKSKHNGVDPMICVEKYGADTTRAHVLFSAPIAEVLEWDETKIVGIERW-FVRLWKL 762

Query: 361 LVSRSVSMILKDYDGMI----------------PTPGAFTESDESILSVCSRVLQEIREN 404
           ++  + ++       +                 P      ++D   L      +  +   
Sbjct: 763 VLDATTALSSAPQGKLNLSVEDIQQKPHAFLKVPNLTNLPDADIDGLLATHETIVLVTNC 822

Query: 405 MQN--QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++     ++  ++ +  L +       + +P     TNP+       +    I  L  LL
Sbjct: 823 IEKNPYALNTVISDLTKLTNT----LSSNRP-----TNPE-------ILYTCISSLLRLL 866

Query: 463 QAFVPKLANKIFDIL 477
               P L ++ ++IL
Sbjct: 867 APIAPALTSEAWEIL 881


>gi|269866487|ref|XP_002652290.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220062801|gb|EED41766.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 315

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 37/305 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y   QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVINQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++  +       +  
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIF--LKTIDHFDEKE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWME--EEGYFFRLSAYQDKLLS 178
            +  +  + + +  D  +          + +      ++ E  +E   FR S  +     
Sbjct: 128 INQMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQELTNFRCSICKTTPQI 187

Query: 179 YYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRK-TFDWGIKIPD 222
                  F L   +                    +++K  L    ++RK    WG+ +P 
Sbjct: 188 KTTKQLFFNLNELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPL 247

Query: 223 DP--QYIMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADLHVIGKDILRFHA 272
                 + YVW DA   YL+             D  +  K   W   +  +GKD + FH+
Sbjct: 248 KEYDDKVFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKW---VLFMGKDNVPFHS 304

Query: 273 IYWPA 277
           I +P 
Sbjct: 305 IIFPC 309


>gi|146296917|ref|YP_001180688.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166200200|sp|A4XKR2|SYI_CALS8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145410493|gb|ABP67497.1| Isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 920

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 114/304 (37%), Gaps = 23/304 (7%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G    +    IM VW D+ +++             +   WP D+++ G D     F
Sbjct: 516 CPVCGCMEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    A       P    +     +  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 570 QSSLLTAVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDE 388
                  D    KD +K+    ++   I N   R +   L D++      G     E D+
Sbjct: 630 SADYTT-DMRISKDIIKQL--TEIYRKIRNTA-RFLLGNLYDFNPKTDKVGCENLKEIDK 685

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRAS 445
             L    ++++++ +  +    ++    V +   +   + Y D  K      K+      
Sbjct: 686 WALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRR 745

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFML 499
           +   V  E++  L  L+   +   A +I+  +   +E+        +  +++ +     L
Sbjct: 746 SAQTVMYEILVALTKLIAPILSFTAEEIWQNIIFKEEDAESVFLTSWPKVNENILKDETL 805

Query: 500 HKTF 503
            + +
Sbjct: 806 EEKW 809



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  RNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R     L +   ++D   T + +     
Sbjct: 105 VIKKLGVNRHEVDPVEFRKKCKEFALSYIDIQRQQFKRLGVFGEWEDPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDKTY 207


>gi|312143927|ref|YP_003995373.1| isoleucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904578|gb|ADQ15019.1| isoleucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 931

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 76/453 (16%), Positives = 152/453 (33%), Gaps = 29/453 (6%)

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY-DDFIR 96
           H+  GL+V      D  G    KA   AG +T       +   ++   ++D+S+ D    
Sbjct: 345 HQEYGLEVYAPM--DNRGYFTEKAGDFAGKSTDEVNIMVTDKLKEKNLLMDLSFIDHQYP 402

Query: 97  TTEKR-----HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
              +         T +      + K    K      +       + ++ +      +   
Sbjct: 403 HCWRCKGNLLFRATDQWFASIDAIKDKTLKAISEVEWHPS----WGEERMKNMISERSDW 458

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                 +W      F+     +  +        + I   E  +    +    L     S 
Sbjct: 459 CISRQKKWGVPIPIFYCDECGEAVINDDTLDSVKNIFAAEGSSAWYKYPAEKLLPKDYSC 518

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
              D   K     + IM VW D+ +++                 WPA +++ G D     
Sbjct: 519 PHCDG--KSFTKEEDIMDVWFDSGSSHKAVLE------TRDNLSWPAQIYLEGTDQYRGW 570

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A       P  + + +   +  KG K+SKS GNV+ P +VI++ G D LR ++
Sbjct: 571 FNSSLLTAVATEGRAPYNEVITNGFTVDDKGIKMSKSQGNVVSPHKVIDQYGADILRLWV 630

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDE 388
                   D     + LK+  N+++   I N     +  +   D +          E D 
Sbjct: 631 ASSD-FKNDVKVSDNILKQ--NSEVYRRIRNTYRFVLGNVSDFDIEKNYIKYEDRKELDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAS 445
            I+     +++++ +  +    HR    V +   V     Y D  K       T+     
Sbjct: 688 WIMIRLQDLIKKVTKAYEKYEYHRVYHDVHNFCTVEMSSLYMDITKDRLYTDGTDSLSRR 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +      +++  L ++L   +P  + +++  L 
Sbjct: 748 SAQSTLYDIMMALVVMLAPLLPHTSEEVWQFLG 780



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 16/161 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +     Y N   HIGHA   I+ D + RF  L G    +  G D HG  I   
Sbjct: 45  EGKESFILHDGPPYANGDIHIGHALNKILKDFVTRFATLKGYYSPYVPGWDTHGLPIEHQ 104

Query: 62  AQNAGVTTKV--------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
             +     +               +  +     R+    L +   +DD   T    +   
Sbjct: 105 VTSEMSDQERQDLSVEELREKCTNYALKYIDRQREQFKRLGVWGEWDDPYLTLSPEYEVK 164

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++ +++  G  Y+G     +    E    + EV  G D
Sbjct: 165 QIEVFGEMAKNGLFYRGKKPVHWCPHCETALAEAEVEYGED 205


>gi|150401369|ref|YP_001325135.1| valyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|150014072|gb|ABR56523.1| valyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 906

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 79/490 (16%), Positives = 157/490 (32%), Gaps = 59/490 (12%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNS----RNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           + G  +         T  V+V++++        +  ++ +I       TTE         
Sbjct: 262 DFGTGVVMVCTFGDKTDVVWVNRHNLEVKEAITEKGELSEICGKYAGMTTEDAKKQIIND 321

Query: 109 LWKK---------ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           L ++           + G  ++        + D+ + N  E+    +      +  P + 
Sbjct: 322 LKEEGYLIKQDPLEQNVGVCWRCKTPIEIIVGDQWFVNVKELLDMVEKATNEIKWTP-EH 380

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-----ISFVKSGLKDLSLSRKTF 214
           M+       +           +      +P+    +             +        T 
Sbjct: 381 MKTR-LLQWIKDMGWDWCISRQRLFATPIPVWYCKDCGEVIVAKEEDLPIDPTKECPYTC 439

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
             G K       ++  W+D+    +  T +  N +    K +P  L   G DI+R  A Y
Sbjct: 440 KCGNKNLTPETDVLDTWMDSSITPMAITEWETNNEF-FNKRYPVQLRPQGHDIIRTWAFY 498

Query: 275 WP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  L+   P  + V +       G K+SKS GNV++P E+ ++ G DALR +    
Sbjct: 499 TIIKSIALTDKKPWDEIVINGMVFGEDGHKMSKSRGNVVEPFEITKDYGADALRLW-ASN 557

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-------------------- 372
              G D  +    +             N  SR   M L D                    
Sbjct: 558 STIGNDVPFAWKEVD--YGYRFLRKFWN-ASRFAKMNLDDETIETIKNSINDSKIKLIVG 614

Query: 373 -----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
                              D  ILS  +R+++ +  +++N   +  +  +   V     D
Sbjct: 615 GNDVEISNPCNCVNVDNPVDLWILSKLNRLIENVSNDLENYKFNT-VGDIEKFVWHDLCD 673

Query: 426 RYFDAQKPWELKKTNPDRAS----TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            Y +  K     K + ++A        Y    VI  +  L+  F P  ++ + +I  + D
Sbjct: 674 NYIEMVKYRLYNKEDSEKAKISKFNAQYTLYTVITTVLKLMAPFTPHFSDIVGEIYKIDD 733

Query: 482 ENRCFQSLDQ 491
            +  +  +D+
Sbjct: 734 LHGSWCKVDK 743



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 15/166 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GHA      D++ARF R++  DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHALNWTYMDIIARFKRMNNYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                D+N    R+  + L IS  +D    T    +    
Sbjct: 91  VEEIHGITKTDIDRHEFRKLCIELTDENIEKMREQINSLGISIDWDREYITMSPEYVKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +  + K+     +Y+G +   +  R +      EV       Y N 
Sbjct: 151 QTAFVKMHKDNLVYRGKHPVNWCPRCQTAIAFAEVEYKDRKSYLNH 196


>gi|330887935|gb|EGH20596.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 497

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230


>gi|325283140|ref|YP_004255681.1| leucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314949|gb|ADY26064.1| leucyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 819

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 6/193 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF  G D  G     AA  
Sbjct: 42  EKHYALTMFPYPSGNLHIGHWYANVAPDAHARWMRMRGHNVLFPMGFDSFGLPAENAAIK 101

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV  + +   N  + +     +   I +     T++  ++   +  + +   +G  YK 
Sbjct: 102 RGVNPRSWTYDNIAHMKGQFGRMGTMIDWTRSFATSDPEYYRWNQWFFTQFFKRGLAYKK 161

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V     G        PV+      ++ +++ Y D+LL + ++
Sbjct: 162 GGLVNWCPKDQTVLANEQVV----GGACERCGTPVERRNLSQWYLKITDYADELLDFSDT 217

Query: 183 HPEFILPIERRNE 195
                + + + N 
Sbjct: 218 DMPERVQLMQTNW 230



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 99/305 (32%), Gaps = 40/305 (13%)

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
                LP +            L    +       G     D    M  ++D  + Y+   
Sbjct: 457 QLPVRLPDDVEFTPTGQSPLKLDTEWVKATCPCCGGPAERDTD-TMDTFVD-SSWYMYRY 514

Query: 243 GYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKV 290
              D      D ++    P DL+  G +    H +Y   +            N P  +  
Sbjct: 515 LSPDYDGGPFDPAQRGLMPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTDQNEPFRRVR 574

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                +   GEK+SKS GNV+DP +++ E G D +R +L+        G +D  G+    
Sbjct: 575 NQGMVLGEDGEKMSKSRGNVVDPDDLVAEYGADTVRTYLMFIAPWELGGPWDTKGI---- 630

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                NG    + R  S+    + G  P       S+  +       L ++  + +    
Sbjct: 631 -----NGPAKWLGRVWSL----FFGGQPDGPREDVSEADLRYAVHSTLNKVNGDFERMSF 681

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +  +A ++ L +             L +              E +    ++L   VP +A
Sbjct: 682 NTIVAALMELTN------------VLVRAGRSDLYGSPAW-DEALNIFNLMLAPVVPHIA 728

Query: 471 NKIFD 475
            +++ 
Sbjct: 729 EEVWQ 733


>gi|237747343|ref|ZP_04577823.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378694|gb|EEO28785.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 879

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 7/198 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA 
Sbjct: 35  KGKFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAM 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  + +     +   I +   +   +  ++   + ++ K+ +KG IY+
Sbjct: 95  AHGIPPAEWTYSNIAHMKSQMASMGLAIDWTREMTACKPEYYKWNQWMFLKMLEKGIIYQ 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V  G            ++  E   Y+ R++ Y +  L  Y 
Sbjct: 155 KTGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYARITDYAE-ELLDYV 209

Query: 182 SHPEFILPIERRNEVISF 199
           +H     P   R   I++
Sbjct: 210 THKLPGWPERVRTMQINW 227



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 127/373 (34%), Gaps = 48/373 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    +DE + N    + G   +      +   +++   YF R  +         E + 
Sbjct: 478 SGNPLAKDEKFINTTCPHCGKPARRETDTMD--TFVDSCWYFMRYCSPGSDKSMVDERND 535

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D G+   D+P   +      L      T Y
Sbjct: 536 YWMPMDQYIGGIEHAVMHLLYARFWTKVMRDLGLVKFDEPFVRLLTQGMVL----NETYY 591

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG--EK 302
            ++  G K  F P ++ +                L     P+  ++ S G  +  G  EK
Sbjct: 592 REDAAGKKTWFNPEEIEL---------------QLDEKGRPVSARLISDGQPVSIGGIEK 636

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N IDP   I++ G D  R F +      +   +   G++         G    +
Sbjct: 637 MSKSKNNGIDPQTQIDQYGADTARLFTMFASPPEQTLEWSGSGVE---------GASRFL 687

Query: 363 SRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            R  +   ++ D ++      P    +S + +     +VLQ+  ++      +  ++  +
Sbjct: 688 RRVWAFAYRNRDIVVTANPSLPARLPDSLKELRRDIHQVLQQANQDYARIQYNTVVSACM 747

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +++             L+   PD +     V  E +     +L   VP +   I+  L 
Sbjct: 748 KMLN------------TLEAAKPDSSPEFASVLRETLSIFLKVLYPVVPHITYVIWKELG 795

Query: 479 VADENRCFQSLDQ 491
            AD+       D 
Sbjct: 796 YADKEGDLLDTDW 808


>gi|170759745|ref|YP_001785428.1| isoleucyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406734|gb|ACA55145.1| isoleucine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 1038

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 138/410 (33%), Gaps = 16/410 (3%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      K  +    +  RD+   N++ +    D          V
Sbjct: 379 SEKFTHSYPHCWRCNTPLLYYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFV 438

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  ++              L  +  +   +         ++  
Sbjct: 439 ENVIDWGISRDRYWGTPLPIWECDCGHRECIGSVEELKEKGISVPENIELHKPYIDAVKL 498

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G ++      ++  W D+ +       Y           +PA       D     
Sbjct: 499 NCPHCGKEMTRT-NEVIDCWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGW 557

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         +     +   G K+SKS GNV+DP +V+E  G DA R+  
Sbjct: 558 FYTLLAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHF 617

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDE 388
               A      + ++ +K+     L+          +   L +++ +      +    D+
Sbjct: 618 YTASAPWLPTRFSEEDVKETQRKFLSTLWNVYSFYVLYADLDNFNPLEYKEFKSEHVMDK 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRAS 445
            ILS  + +++ + E++ N  I +A  ++   V E+ + Y   +  + W  + T+    +
Sbjct: 678 WILSKLNSLIKNVEEHLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGA 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                TV     +  +   FVP +  +++  L    +    +S+     P
Sbjct: 738 YTTLYTVL--TTVIKVAAPFVPFITEEMYQNLVANLDKNAEESIHLCKWP 785



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E           N +PH+GH    ++ D++ R+  + G  VL   G D HG  +   
Sbjct: 36  EDGEYFTFYDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V + +  ++ M++ L      DD   T E  +
Sbjct: 96  IEKKLGISGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYENNY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K++  K  +YKG     Y  R     +  EV +G  
Sbjct: 156 IESVWWALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYK 199


>gi|7527726|gb|AAF63175.1|AC010657_11 T5E21.11 [Arabidopsis thaliana]
          Length = 1115

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 138/431 (32%), Gaps = 64/431 (14%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +        ++ + Y N   + K A       ++  ++++ ++         +
Sbjct: 498 MRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRRWLE 557

Query: 174 DKLLSYYESHPEF--ILPIER--------------RNEVISFVKSGLKDLSLSRKTFDWG 217
           +           +   +P                  +  +            ++K     
Sbjct: 558 NIRDWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKK 617

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            ++  DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    +  
Sbjct: 618 FELTRDPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFFWVARMVM 675

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L   +P  K  F        G K+SKSLGNVIDP+EVI  V ++ L   L      
Sbjct: 676 MGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLD 735

Query: 336 GKDGFYDKDGLKK--------------------------RVNADL-----ANGIGNLVSR 364
            K+    K+G  K                          ++N D+          N +  
Sbjct: 736 PKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWN 795

Query: 365 SVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +V   +         P   +        + ILSV ++ + +   ++       A   + +
Sbjct: 796 AVRFAMMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAISKTVVSLDAFEFSDAANTIYA 855

Query: 420 LVS--EVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                  D Y +A KP      NP    +RA     + +  +     LL  F+P +  ++
Sbjct: 856 WWQYQFCDVYIEAIKP-YFAGDNPTFASERAHAQHALWI-SLETGLRLLHPFMPFVTEEL 913

Query: 474 FDILFVADENR 484
           +  L    +  
Sbjct: 914 WQRLPAPKDTE 924



 Score = 63.6 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 42/155 (27%), Gaps = 26/155 (16%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII-------ADVLARFHRLDGLDVLFTTGTDEH 54
             +    I           HIGHA    I        D + R+ R+ G + L+  G D  
Sbjct: 165 SSKPPFVIVLPPPNVTGALHIGHALTSAIEVSLAYCLDTIIRWKRMSGYNALWVPGVDHA 224

Query: 55  GQKIAKAAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFI 95
           G       +   +                     + +Q           L  S D     
Sbjct: 225 GIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSREC 284

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
            T +++        + ++  +G IY+      +  
Sbjct: 285 FTMDEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDC 319


>gi|116670794|ref|YP_831727.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|189082980|sp|A0JX57|SYL_ARTS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116610903|gb|ABK03627.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 843

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    + DV+AR+ R  G DVL   G D  G     AA
Sbjct: 50  SRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGYDVLHPIGWDSFGLPAENAA 109

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            IS D    + T++  ++   + L+K+  ++G  Y
Sbjct: 110 IKRNAHPSEWTYANIDTQAASFKRYAISADWSRRLHTSDPEYYRWTQWLFKRFYERGLAY 169

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D+    +++V  GA           V       ++F+++ Y D+LL   
Sbjct: 170 RKDSPVNWCPKDQTVLANEQVVNGA----CERCGTAVTKKSLNQWYFKITDYADRLLDD- 224

Query: 181 ESHPEFILPIERRNEVISF 199
                   P        ++
Sbjct: 225 MDELRGHWPERVLAMQKNW 243



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 101/285 (35%), Gaps = 35/285 (12%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +     +   T G  D    +     P   +V G +    H +Y   F        ++ 
Sbjct: 529 WYFLRFVSPQYTEGPFDPKKINDWM--PVGQYVGGVEHAILHLLYARFFTKVIHDLGMID 586

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A+ P    + + G +L+ G+ +SKSLGN +D  E +++ GVDA+R  ++       D   
Sbjct: 587 ADEPF-SALLNQGQVLNGGKAMSKSLGNGVDLGEQLDKYGVDAVRLTMIFASPPEDDV-- 643

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D   +    +A        L            D          + D ++ SV  R + + 
Sbjct: 644 DWADVSPSGSAKFLARAWRLAQ----------DVSSAPGADAAQGDRALRSVTHRTIADA 693

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              + +   +  +A+++ LV+   +  DA             A        E    +A++
Sbjct: 694 AALLDSNKFNVVVAKLMELVNATRKTIDAAS----------GAGGADPAVREAAEAVAVI 743

Query: 462 LQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFD 504
           L  F P  A  ++++L       N  + S D+ L     +     
Sbjct: 744 LSLFAPYTAEDMWNVLGHPASVANAGWPSHDEALLVQDTVTAVVQ 788


>gi|50954900|ref|YP_062188.1| leucyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657969|sp|Q6AEW2|SYL_LEIXX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50951382|gb|AAT89083.1| leucyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 866

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 6/182 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R + Y+     YP+   H+GHA    + DV+AR+ R  G  VL   G D  G     AA
Sbjct: 48  NRPRKYVLDMFPYPSGDLHMGHAEAYALGDVIARYWRHQGFSVLHPIGWDAFGLPAENAA 107

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +   N    +           +D  ++T +  ++   + L+ K+ +KG  Y
Sbjct: 108 IKRGLDPRGWTYDNIAQQKASMRRYAPSFDWDRVLQTCDPSYYKWNQWLFLKLYEKGLAY 167

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G          N V   +   ++FR++ Y D+LL   
Sbjct: 168 RKASQVNWCPFDQTVLANEQVVNG----RCERCDNLVTKKKLTQWYFRITDYADRLLDDL 223

Query: 181 ES 182
             
Sbjct: 224 NQ 225



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 100/312 (32%), Gaps = 42/312 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHV 262
            ++   F  G     D    M  ++D  + Y       ++   +       K+ P D +V
Sbjct: 524 WVNVSCFSCGGPAQRDTD-TMDTFVD-SSWYFLRFLNPNDDTRAFDPREAEKWAPVDQYV 581

Query: 263 IGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G      H +Y        +    +S   P    + + G +L  G  +SKS GN++   
Sbjct: 582 GGVTHAILHLLYSRFITKVLFDQGFVSFTEPFT-VLLNQGMVLMDGSAMSKSRGNLVKLS 640

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + ++  GVDA+R  +        D   D   +    +A        +            D
Sbjct: 641 DQLDAHGVDAVRLTMSFAGPPEDDI--DWADVSPSGSAKFLARAWRVAH----------D 688

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                   +   D ++  V  R L +    ++    +  +A+++ LV+   +  D+    
Sbjct: 689 VTSAPDVVWKSGDPALRRVTHRFLADTPGLVEAFKFNVVVARLMELVNATRKTIDSGA-- 746

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                  DRA        E      + L  F P  A  ++  L             ++  
Sbjct: 747 ----GPADRA------VREAAEVTTMALNLFAPYTAEDMWARLGYEPSVSLVP--WRKPD 794

Query: 495 PGFMLHKTFDPI 506
           P  ++ +    I
Sbjct: 795 PTLLIEEAVTAI 806


>gi|148653627|ref|YP_001280720.1| leucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|189083148|sp|A5WGH9|SYL_PSYWF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148572711|gb|ABQ94770.1| leucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 885

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 6/214 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+    Y+ +   YP+ + H+GH     I+DVL+R++RL G  VL   G D  G     A
Sbjct: 41  KDANTRYMLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGDQVLQPMGWDAFGMPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R     L +S D      T    ++   +  + ++  KG +
Sbjct: 101 AIANQVAPAKWTFSNIDNMRAQLKTLGLSIDWSREFATCTPEYYRWEQWFFLQLYKKGLV 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G           PV+  +   Y+F+++ Y D+LL  
Sbjct: 161 YKKLATVNWDPVDNTVLANEQVVDGKG----WRSGAPVEKRDIPMYYFKITDYADELLDD 216

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +             +     +S   ++    K 
Sbjct: 217 LDKLEGQWPSDVITMQRNWIGRSQGMEVHFPYKN 250



 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 15/196 (7%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGI 358
           EK+SKS  N +DP   I++ G D +R + +      +   +  D LK   N    +    
Sbjct: 630 EKMSKSKNNGVDPQTTIDQYGADTVRLYTLFAAPADQTLEWSDDSLKGPYNFLKKVWRET 689

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESD---ESILSVCSRVLQEIRENM-QNQLIHRAL 414
            + +  +  + L+  +    +    ++ D   + +      V+ +I  ++ +   ++  +
Sbjct: 690 QSHLEATQELGLQVANLPAASSIDASQLDSLAKGLRRKTHEVITKIDNDLGERLSLNTPV 749

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + ++ L +E+  +            N       L V  E +  L  LL  + P +   + 
Sbjct: 750 SSLMELANEIGTFISK---------NQQINEHTLAVQHEALVTLLTLLSVYAPHIGEHLL 800

Query: 475 DILFVADENRCFQSLD 490
           + L V      +   D
Sbjct: 801 EKLGVDTTRLRYPEAD 816


>gi|135143|sp|P13503|SYLM_SACDO RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|68519|pir||SYBYMX leucine-tRNA ligase (EC 6.1.1.4) precursor, mitochondrial - yeast
           (Saccharomyces sp.)
 gi|4842|emb|CAA31343.1| unnamed protein product [Saccharomyces douglasii]
          Length = 894

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 78/198 (39%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI     YP+   HIGH    +I+D L RF++  G +V+   G D  G     AA   G+
Sbjct: 50  YILCQFPYPSGVLHIGHLRVYVISDSLNRFYKQRGYNVIHPMGWDAFGLPAENAAIERGI 109

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++   N    +   + +  +  +D  + T +  ++   + ++ K+ + G  Y+    
Sbjct: 110 NPAIWTRDNIAKMKQQMESMLANFDWDREVTTCDPEYYKFTQWIFLKLFENGLAYRKEAE 169

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D+    +++V               V+  + + +F  ++ +  KL  +     +
Sbjct: 170 INWDPVDKTVLANEQVDAQ---GRSWRSGAIVEKKQLKQWFLGITKFAPKLRKHLNQLKD 226

Query: 186 FILPIERRNEVISFVKSG 203
           +   +++  +       G
Sbjct: 227 WPSNVKQMQKNWIGESIG 244



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 75/180 (41%), Gaps = 19/180 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N  DP E I   G DA R  ++ +        +D+  +   +R    +    
Sbjct: 645 EKMSKSKHNGADPNECILRHGADATRAHILFQSPIADALNWDESKIVGIERWLQKVLCLT 704

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
            N++    ++ +        TP    +++    +   R L+ I E+ + +  ++  ++  
Sbjct: 705 KNILGLEKNLAISK---DYKTPTDLNDAEVKFHNDFQRFLKSITESFEVHLSLNTVISDY 761

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + +           LKK+   +      + V+ +++L  ++   VP ++ +  +++
Sbjct: 762 MKLTNLL-----ESA---LKKSEVRK-----EMMVQNLQKLVTIIYPAVPSISEEAAELI 808


>gi|325955471|ref|YP_004239131.1| Valyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438089|gb|ADX68553.1| Valyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 873

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 126/364 (34%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F +++      L    +      P + +N         + D ++SR+   W
Sbjct: 350 IEPKISDQWFLKMADLAKPALDNVMNDVIKFHPPKFKNT-YRNWMENITDWNISRQ-LWW 407

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 408 GHQIPAYFYGEGSEDFVVAMTIEEALTLAQEKTNNPNLMQSDLKQSEDALDTWFSSWLWP 467

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    ++NP   +   ++P    V G DI+ F    +    +      P     F+   
Sbjct: 468 ISVFDGINNPKNDEINYYYPTQDLVTGPDIIFFWVARMIMAGYEYLDEKPFENVYFTGIV 527

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
               G K+SKSLGN  DP+E+I E G DA R  ++     G D  +D +   +    + A
Sbjct: 528 RDKLGRKMSKSLGNSPDPVELINEFGADATRMGMLLTAPAGNDLPFDVELCVQ--GRNFA 585

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N           + D           + +       + L +I  N +   +  AL 
Sbjct: 586 NKIWNAFRLIKGW---EIDQNAQQSSTQATAVQWFAHRFQQALADIEHNYEQYRLSDALM 642

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +  L+ +     Y +A KP      +P  A T  + T+  + ++  +L  F+P L  ++
Sbjct: 643 TIYKLIWDDFCSWYLEAIKPNY---GDPIDAKT-YHSTIGFLEEVLKVLHPFMPFLTEEL 698

Query: 474 FDIL 477
           +  +
Sbjct: 699 WQNI 702



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 53/178 (29%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARMRGYNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        +  +      D    L  S  +D    T  +    
Sbjct: 92  VAKLKEQGISKEEIGREKFLEHAWEWTHEYGGVILDQLKKLGASCDWDRTQFTMNESLSK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             + ++  + +KG IY+G     +    +   +D+EV               V+  ++
Sbjct: 152 AVQQVFVDLYNKGLIYRGYRMVNWDPEAKTNISDEEVIYKEKNGKLYHLKYQVEGTDQ 209


>gi|126463258|ref|YP_001044372.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166231636|sp|A3PMN4|SYL_RHOS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126104922|gb|ABN77600.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 847

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 6/204 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR     G  VL   G D  G     AA 
Sbjct: 31  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARQKAAAGFSVLHPMGWDAFGMPAENAAM 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N  + R     L +S D      T +  ++   + ++  + + G +Y+
Sbjct: 91  ERGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMFIDMMEAGLVYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G           PV   E   +FFR+S Y  +LL   +
Sbjct: 151 KNAVVNWDPVDMTVLANEQVIDGKG----WRSGAPVVRRELTQWFFRISDYAGELLEALD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLK 205
           +  ++   +            GL+
Sbjct: 207 TLKDWPEKVRLMQANWIGQSRGLQ 230



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 67/411 (16%), Positives = 127/411 (30%), Gaps = 92/411 (22%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E  G            L    S      P++R          
Sbjct: 427 WGISRQRYWGCPIPVIHCETCGVVPEAKENLPVRLPDDVSFDVPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT--TGYLDNPDGSKAKFW-PAD 259
                         G K   +    M  ++D+   Y            D  +A +W   D
Sbjct: 480 -----WRDCTCPKCGAKARRETD-TMDTFVDSSWYYARFTAPRAATPTDAEEADYWMNVD 533

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILH------- 298
            ++ G +    H +Y      A   + +LP            + + +H   L        
Sbjct: 534 QYIGGIEHAILHLLYSRFFARAMQKTGHLPAKAIEPFNALFTQGMVTHEIYLTRDAAGRP 593

Query: 299 ---------KGE-------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                     G              K+SKS  NV+DP+ +I + G D  R+F++ +    
Sbjct: 594 VYHLPEDVTDGRLADGTPVEIIPSAKMSKSKKNVVDPMNIIRQFGADTARWFVMSDSPPE 653

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  +   G +              + R   +     D +    G     D ++    +R
Sbjct: 654 RDVEWTASGAEAA---------SKHLHRVWRLA----DEISRADGEANAEDGALDKATAR 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + E+ + ++    ++A+A++    + + R                + +         +R
Sbjct: 701 AIAEVTQGVEGFAFNKAIAKLYEFTNTLSR--------SGAGAEAKKRA---------MR 743

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD-PI 506
            +A L+   VP LA +++ +L    E    Q+   +  P  ++  T   PI
Sbjct: 744 TMAQLMSPMVPHLAEEVWAMLG--GEGLVAQAAWPKADPALLIDDTVTLPI 792


>gi|294673782|ref|YP_003574398.1| isoleucine--tRNA ligase [Prevotella ruminicola 23]
 gi|294471627|gb|ADE81016.1| isoleucine--tRNA ligase [Prevotella ruminicola 23]
          Length = 1186

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 115/304 (37%), Gaps = 24/304 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y         K   +P D    G D     F  ++
Sbjct: 655 KPMKRETDLIDVWFDSGSMPYAQIHYPFENKDLIDKGIAFPCDFINEGVDQTRGWFFTLH 714

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + S   +  KG K+SK +GNV++P ++I + G DA+R +++    
Sbjct: 715 AIATMIFDSVAFKNVISSGLVLDAKGNKMSKHVGNVVNPFDMIGKYGSDAVRLYMMTNSE 774

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILS 392
              +  +D +G+ +                ++   +  +D            E D  ILS
Sbjct: 775 PWDNLKFDPEGVDEVRRKFFGTLYNTYSFFALYANVDGFDPATAQVAFDKRPEIDRWILS 834

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
             + +++ +   +      RA   + + V++   + +   + ++ W   K   +   +  
Sbjct: 835 CLNTLIKGVEAELDGYDPTRAGRLIDAFVNDDLSNWFVRLNRKRFW--GKEMSEDKLSAY 892

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILF------------VADENRCFQSLDQRLKPG 496
                 +  +A LL  F P  A++++  L             VADE +  + L+ R++  
Sbjct: 893 QTLYTCLMTVAKLLAPFAPFYADQLYKDLGGELDSVHLDKFPVADEAQIDKDLEARMQMA 952

Query: 497 FMLH 500
             + 
Sbjct: 953 QKIT 956



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFVFFEGPPSANGHPGIHHVLARTIKDTFNRYKTMKGYQVKRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V   ++ +RD+ + +   +  D+   T + 
Sbjct: 101 ELGITKADIDNKASEKYISTEDYNKKCRENVMMFTQEWRDLTEKMGYFVDLDNPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L ++  +KG +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLQQFYNKGLLYKGYTIQPYSPGAGTGLSSHELNQPGC 206


>gi|237749157|ref|ZP_04579637.1| valyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380519|gb|EEO30610.1| valyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 933

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 125/384 (32%), Gaps = 77/384 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG FF   +  +  L          +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 369 PEGTFFPGKSLAEVALEKVRDGEVRFMPENWTNT-YNQWLNNIQDWCISRQ-LWWGHQIP 426

Query: 220 IPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPDGSKAK 254
              D +  +YV                         W  +     +T G+ +        
Sbjct: 427 AWYDDEGNIYVAKTEEEARAKAGGKAIHRDPDVLDTWFSSALVPFSTLGWPEETR-DYNM 485

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F P+ + V G DI+ F    +       +  +P              G+K+SKS GN ++
Sbjct: 486 FLPSTVLVTGFDIIFFWVARMVMMTLHFTGKVPFKTVYVHGLVRDASGQKMSKSKGNTLN 545

Query: 313 PIEVIEE-------------------------------------VGVDALRYFLVREIAC 335
           PI++I+                                       G DALR+ +    + 
Sbjct: 546 PIDLIDGIDVESLVQQRTFGLMNPKQADSIAKATRKEFGKGIPAFGTDALRFTMASYASL 605

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSV 393
           G++  +D +  +     +  N + N  +R V M  +  D          F+ +D  I S 
Sbjct: 606 GRNINFDLNRCEG--YRNFCNKLWN-ATRFVLMNTEGEDCGFSGNDAMEFSLADRWIESE 662

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             R   E+ +           + V   + +   D Y +  K  ++ + N  +        
Sbjct: 663 FQRAASEVEKGFAEYRFDNIASAVYRFIWDEYCDWYVEMAKV-QIAEGNDTQKRATRNTL 721

Query: 452 VEVIRQLAILLQAFVPKLANKIFD 475
           + ++ ++  L    +P +  +++ 
Sbjct: 722 LTILEKVLRLAHPVIPFITEELWQ 745



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 22/175 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   I D L R+HR+ G +  +  GTD  G      
Sbjct: 32  ENKPSFAIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMRGYNTAWIPGTDHAGIATQIV 91

Query: 62  AQNAGVTTK------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKR 101
            +      K              V +             R M    D   + F  T ++ 
Sbjct: 92  VERQLDAQKISRHDLGREKFLEKVWEWKEKSGSTITGQMRHMGTSPDWEREYF--TMDET 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                  ++ ++ ++G IY+G     +        +D EV    +         P
Sbjct: 150 RSKVVADVFVRLYEEGLIYRGKRLVNWDPVLGTAVSDLEVVSEEENGSMWHIRYP 204


>gi|313678547|ref|YP_004056287.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950479|gb|ADR25074.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 779

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 8/229 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+   H+GH     I D LARF+R  G +VL   G D  G     AA   
Sbjct: 33  KKYILSMFPYPSGNIHMGHVRNYAIGDALARFYRRKGFNVLHPFGWDAFGLPAENAAIKH 92

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            +  K +  QN  +  +    L IS+  +    T+++ +    + ++ K+ +KG +Y+  
Sbjct: 93  NIHPKTWTYQNISSMNENIKKLGISFAWNYECITSDEIYTRWEQEIFIKMWNKGLVYRKK 152

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE-- 181
               +  +D+    +++V  G           P++  E E Y+ ++  Y  +L    E  
Sbjct: 153 ALLNWCNKDKTVLANEQVING----RCWRCDEPIEHKETEQYYLKIRDYAKELQESLELL 208

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                   +  +N  I++    L   S S K+    +++    +  + +
Sbjct: 209 KGNWPDKVLSMQNNWINYKTGFLATFSDSAKSLKSNVEVFISDKKDLDI 257



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 115/345 (33%), Gaps = 49/345 (14%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--KTFDWGI 218
             + +      Y    +         I+P +  N  +   ++     S +      +W  
Sbjct: 378 NMQDWGISRQRYWGAPIPMIHCSICGIVPEKFENLPVKLPENVDFTKSGNPITSNLEWIK 437

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG------------SKAKFWP-ADLHVIGK 265
                   +     D    +  ++ Y                     ++W   D ++ G 
Sbjct: 438 TKCPKCNSVAMRETDTFDTFFESSWYFLRYTCPPELRNDMALDRDSVEYWNSVDTYIGGI 497

Query: 266 DILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y   F         +S   P    + + G +L  G K+SKS GN + P +++
Sbjct: 498 EHAILHLLYARFFTKVMADLNYVSFREPF-NILLTQGMVLKDGAKMSKSKGNTVSPTDLL 556

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM----ILKDY 373
           E+ G D +R F++      K+  +  D ++        N + NL SR  ++    ILK  
Sbjct: 557 EKYGADTVRLFILFAAPPAKELEWSDDSVEG--CNRFINRLYNLYSRVQNVNDLSILKSI 614

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +    T        +  LS   +      +N      +  +A V+     ++ Y      
Sbjct: 615 NHNSLTDFEKNARMKLYLS-LKKQESIYLDNRNEYAFNTLIASVMET---LNAY------ 664

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +K +         + +E       +L+ F+P L  ++ + LF
Sbjct: 665 ---EKIDN------NLLLLEFFYVALNILEPFMPHLVWELSNNLF 700


>gi|288928060|ref|ZP_06421907.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330894|gb|EFC69478.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 1146

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 100/266 (37%), Gaps = 12/266 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y         K   +PAD    G D     F  ++
Sbjct: 607 KPMKREMDLIDVWFDSGAMPYAQVHYPFENAELIDKRIAFPADFINEGVDQTRGWFFTLH 666

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +  KG K+SK +GNV++P E++E+ G D +R +++    
Sbjct: 667 AIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVGNVVNPFEMMEKYGADPVRMYMLTNSE 726

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D + + +                ++   +  +D            E D  ILS
Sbjct: 727 PWDNLKFDAESVDEIRRKLFGTLYNTYSFFALYANVDGFDYSQADVPLNERPEIDRWILS 786

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
               +++ +   M +    RA   + + V++   + Y   + ++ W   K       +  
Sbjct: 787 ELHSLVEGVEREMDDYDPTRAGRLIDTFVNDDLSNWYVRLNRKRFW--GKEMSQDKLSAY 844

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIF 474
                 +  +A LL  F P  A++++
Sbjct: 845 QTLYTCLETVAKLLAPFAPFYADQLY 870



 Score = 54.0 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 57/205 (27%), Gaps = 25/205 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFVFYEGPPSANGHPGIHHVLARSIKDTFNRYKTMKGFQVKRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V   +  +R++ + +   +  D+   T + 
Sbjct: 101 ELGITKADIDNKESAKYISVADYNKKCRENVMMYTAEWRELTEKMGYFVDLDNPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           ++ +T   L K++  K  +YKG     YS       +  E+                   
Sbjct: 161 KYIETLWWLLKQLYTKDMLYKGYTIQPYSPAAGTGLSSHELNL-PGCYRDVKDTTVTAQF 219

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPE 185
           E +        +       + + P 
Sbjct: 220 EIKNPKPEWEQWGKAYFMAWTTTPW 244


>gi|126728331|ref|ZP_01744147.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126711296|gb|EBA10346.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 851

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 7/217 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+ + +G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKQNGFNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N          L    D      T +  ++   + L+  +  +G +Y
Sbjct: 90  MASGGHPKDWTYGNIDTMVGQMKPLGFGLDWSRMFATCDPEYYGQQQALFIDMLSEGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S    +LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVIDGKG----WRSGAEVERRELTQWFFKISDMAGELLDAI 205

Query: 181 ESHPEFILPIERRNEVISFVKSGL-KDLSLSRKTFDW 216
           +   ++   ++           GL    SL+  +  +
Sbjct: 206 DGLDDWPAKVKLMQANWIGRSRGLQFAWSLTEPSHGF 242



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/383 (13%), Positives = 116/383 (30%), Gaps = 93/383 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL--------- 207
           V+      +      Y    +         ++P ++ N  +        D+         
Sbjct: 419 VEKFRLRDWGLSRQRYWGCPIPVVHCDDCGVVPEKKENLPVRLPDDVTFDVPGNPLDRHP 478

Query: 208 -SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHV 262
                     G     +    M  ++D  + Y            +     A +   D ++
Sbjct: 479 TWRDCACPTCGKPAKRETD-TMDTFVD-SSWYFARFTAPHAETPTDLEDAAYWMNVDQYI 536

Query: 263 IGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKG-------- 300
            G +    H +Y      A + + +LP            + + +H     KG        
Sbjct: 537 GGIEHAILHLLYSRFFARAMIRTGHLPEKSAEPFNALFTQGMVTHAIYQTKGTDGRPVYH 596

Query: 301 -------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                                     K+SKS  NV+DP+ +I   G D  R+F++ +   
Sbjct: 597 YPEDVELRDGGGFLKDGTQVEVIPSAKMSKSKNNVVDPMNIIATYGADTARWFVLSDSPP 656

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +D  +   G +              ++R   +  +     +P     T+ D ++L    
Sbjct: 657 ERDVEWTAAGAEAA---------SKHLARVFRIASEIAGADVPP----TQEDAALLKETH 703

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + + ++   +++   + A+A++ +  + + +            T   R +          
Sbjct: 704 KAIHDVTMGVESFGFNAAIAKLYAFTNTLSK--------SRAGTETKRFAA--------- 746

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
           R LA L+    P L+ +I+  L 
Sbjct: 747 RTLAQLMSPMTPHLSEEIWQALG 769


>gi|282859714|ref|ZP_06268815.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587525|gb|EFB92729.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 1220

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 108/307 (35%), Gaps = 38/307 (12%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-------------------------- 254
                 ++ VW D+ +       Y      +K                            
Sbjct: 665 MHRESDLIDVWFDSGSMPYAQLHYPFEGTINKDGLERLGMTEDEYREKLVHSTYDGIAVP 724

Query: 255 --FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
             F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK +GNV
Sbjct: 725 PAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVGNV 784

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I P E++++ G D +R++++       +  +D +G+ +                ++   +
Sbjct: 785 ISPFEMLDKYGADPVRFYMMTNSEPWDNLKFDPEGVDESRRKFFGTLYNTYSFFALYANV 844

Query: 371 KDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDR 426
             Y+    +       E D  I+S  + +++ +   M N    RA   + + V     + 
Sbjct: 845 DGYEGGASVSMSTDAPEIDRWIISKLNSLVKGVTAEMDNYDPTRAGRLIDAFVNNDLSNW 904

Query: 427 Y--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           Y   + ++ W   K   +   +        +  ++ LL  F P  A++++  L  + E+ 
Sbjct: 905 YVRLNRKRFW--GKEMSEDKKSAYCTLYTCLMTVSRLLAPFAPFYADELYKDLGGSCESV 962

Query: 485 CFQSLDQ 491
                  
Sbjct: 963 HLAKWPT 969



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGEPAFIFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMQGFQVQRKAGWDTHGLPVELG 97

Query: 62  AQNA----------------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRT 97
            +                            +  V + +  +R + + +   +  D    T
Sbjct: 98  VEKELGITKKDIDNPASEKYISTVDYNHKCRENVMKFTAEWRQVTEEMGYFVDMDHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +K  +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKNLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|241951700|ref|XP_002418572.1| valine--trna ligase, mitochondrial precursor, putative; valyl-trna
           synthetase, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
 gi|223641911|emb|CAX43875.1| valine--trna ligase, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
          Length = 1113

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 73/471 (15%), Positives = 148/471 (31%), Gaps = 73/471 (15%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R+    ++  K +       +          D        + Y +  ++ K A  +  
Sbjct: 488 DARYKVIEQLKQKGLFVDQKDNEMTIPVCSRSGDIIEPLLKPQWYVDQKQMAKDA-IEVV 546

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD---- 206
                 +     E  +F+            +       P+   N     +   L +    
Sbjct: 547 KRGEIVINPKTSEAEYFQWLENIQDWCISRQLWWGHRCPVYFVNIENEEIHDKLDNNYWV 606

Query: 207 --------LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                      ++  F     I +  + ++  W  +    ++T G+ +        F P 
Sbjct: 607 AGRTEEEAFQKAQTKFPNKKFILEQDEDVLDTWFSSGLWPISTLGWPNETK-DMELFNPM 665

Query: 259 DLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIE 315
            +   G DIL F    +   +  L+  +P  K+VF H  +   +G K+SKSLGNV+DP++
Sbjct: 666 SMLETGWDILFFWVSRMILMSIKLTGKVPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLD 724

Query: 316 VIEEVGVDALRYFLVREIACGKDG-----------------------------------F 340
           VI  + +  L   L+      ++                                     
Sbjct: 725 VINGIPLQGLHDKLLTGNLDPRELKKATEGQKLSYPNGIPECGTDALRFALCAYSTGGRD 784

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVL 398
            + D L+        N I       +  + +DY     +   G  +  ++ IL   S+  
Sbjct: 785 INLDILRVEGYRKFCNKIYQATKFVLGRLGQDYIPPTTSELTGKESLVEKWILHKLSQAA 844

Query: 399 QEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +   E+++ +    A   + +      D Y +  K      T PD+  +        I  
Sbjct: 845 KLTNESLEARNFGDATNHIYNFWYDLCDVYIENSKSLIQDGT-PDQKKSAQDTLYTCIDG 903

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              L+  F+P +  +++  L      R    +   LK    + K   P+F 
Sbjct: 904 ALRLIHPFMPFITEEMWQRL-----PRREPEIINNLK---TIMKAPYPVFQ 946



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           HIGHA  + I D L R++R+ G   LF  G D  G     
Sbjct: 182 IKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNRMQGKTTLFIPGFDHAGIATQS 241

Query: 61  AAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +    +                    + ++  +  ++    L  SYD      T    
Sbjct: 242 VVEKQIWSKEQKTRHDYGREKFIGKVWEWKEEYHQRIKNQFKKLGSSYDWSREKFTLNPD 301

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   + ++ + G IY+      +S++
Sbjct: 302 LSQAVTEAFVRMHEDGTIYRASRLVNWSVK 331


>gi|171057170|ref|YP_001789519.1| leucyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689086|sp|B1XXY5|SYL_LEPCP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|170774615|gb|ACB32754.1| leucyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 887

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 6/217 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I D+L R  R+ G++VL   G D  G     AA 
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGMNVLMPMGWDAFGLPAENAAL 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +  +N    +     +   I +   + T +  ++   + L+ K+ + G   +
Sbjct: 98  KNSVPPEKWTRENIATMKGQMLAMGLAIDWSREVATCDPTYYKWNQWLFLKMLEAGIAER 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+  E  GY+  +  Y D+LL    
Sbjct: 158 RTQVVNWDPVDQTVLANEQVIDG----RGWRSGALVEKREIPGYYLNIVKYADELLGAVA 213

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +  +          V    ++ +      R  F   I
Sbjct: 214 NPEDPNYLSGWPERVRLMQENWIGKSEGVRFAFPHQI 250



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 66/181 (36%), Gaps = 24/181 (13%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N +DP ++I + G D  R F++      +   ++  G++         G    +
Sbjct: 645 MSKSKNNGVDPQDLINQYGADTARLFVMFASPPEQTLEWNDAGVE---------GAHRFL 695

Query: 363 SRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            R     +K  + +          +   +++      VL+++  + +    +  ++  + 
Sbjct: 696 KRVWGFGVKQAELLKGATEVGAELSGDAKALRREVHLVLRQVSYDYERMQYNTVVSGSMK 755

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L++ ++ Y          K +    S    V  E    L   L    P + + ++  L  
Sbjct: 756 LLNALEAY----------KHDGSAGSAA--VLREGYSVLLRGLYPACPHITHHLWSELGY 803

Query: 480 A 480
           A
Sbjct: 804 A 804


>gi|326797485|ref|YP_004315304.1| isoleucyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326548249|gb|ADZ76634.1| Isoleucyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 1137

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 107/292 (36%), Gaps = 16/292 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDIL- 268
           K+  +P  ++ VW D+ +      G                   + +PAD    G D   
Sbjct: 594 KLFREPD-LIDVWFDSGSMPYAQWGLDHEKLAKGEKFPFKEGFEEAYPADFIAEGVDQTR 652

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F  ++  A +L  ++     V +   +   G K+SK LGN +DP   I +   DA R+
Sbjct: 653 GWFFTLHAIATMLCDSVAFKNVVSNGLVLDKNGNKMSKRLGNAVDPFATISKYSADATRW 712

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTE 385
           +++   A   +  ++++GL +                ++   +  +  M          E
Sbjct: 713 YMISNAAPWDNLKFNEEGLDEVRRKFFGTLYNTYAFFALYANIDGFSYMEAEIAYNDRPE 772

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
            D  I+S+ + + +E+    Q+    +A   + + V E   + Y    +    K    + 
Sbjct: 773 IDRWIISLLNSLTKEVDTFYQDFEPTKAARAIQNFVDEHLSNWYVRLCRRRFWKGEYSED 832

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             +        +  +A L+    P  ++++F  L  A +    +S+     P
Sbjct: 833 KISAYQTLYTCLDTVAKLMSPIAPFFSDQLFLDLNNATQKDRAESVHLSFYP 884



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 19/143 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P I H     I D+  R+  L G  V    G D HG  I  A + 
Sbjct: 38  KPYTFYEGPPSANGMPGIHHVMARTIKDIFCRYKTLKGFQVKRKGGWDTHGLPIELAVEK 97

Query: 65  AGVTTKVFVDQ-------NSRNFRDMADVLDISYD------------DFIRTTEKRHHDT 105
               TK  + +       N+   R++    D+  D            +   T +  + +T
Sbjct: 98  TLGITKEDIGKKISVEEYNNACKREVMRYTDVWNDLTEKMGYWVDLKNPYITYQNEYIET 157

Query: 106 CRILWKKISDKGDIYKGCYSGWY 128
              + K++ +K  +YKG     Y
Sbjct: 158 IWWILKELYNKDLLYKGYTIQPY 180


>gi|254481195|ref|ZP_05094440.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038358|gb|EEB79020.1| valyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 922

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 128/394 (32%), Gaps = 82/394 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++          ++  E+     +P +  N   ++++  ++D  +SR+   W
Sbjct: 348 IEPYLTDQWYVDARELAKPAIAAVENGDIQFVPKQWENTYFAWMRD-IQDWCISRQ-LWW 405

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 406 GHRIPAWYDDDGHIYVGESEKAVRAEHKLADTISLSQDNDVLDTWFSSALWTFSTLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             +  K    P+ + V G DI+ F    +          +P             +G+K+S
Sbjct: 466 ETEDLKIFH-PSSVLVTGFDIIFFWVARMIMMTLHFRKEVPFDTVYVHGLVRDAEGQKMS 524

Query: 305 KSLGNVIDPIEVIEE-------------------------------------VGVDALRY 327
           KS GNV+DPI++I+                                       G DALR+
Sbjct: 525 KSKGNVLDPIDLIDGIELEPLVSKRTAGMMQPKLAAKIEKATRKQFPDGIAAYGTDALRF 584

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTE 385
                 + G+D  +D   ++   N    N I N  +R V M     D       P   + 
Sbjct: 585 TYFSLASTGRDVQFDIGRIEGYKN--FCNKIWN-AARYVMMNCDGEDCGQDESLPFDRSL 641

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--P 441
           +D  I+S    +  ++   + +     A   +   +     D Y +  KP  L   N  P
Sbjct: 642 ADRWIVSRLQEIESDVARCVASYRFDLASQALYEFIWNEYCDWYLELSKP-VLWDDNASP 700

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +         + V+     LL   +P +  +I+ 
Sbjct: 701 EAKRGTRRTLIRVLETWLRLLHPLMPFITEEIWQ 734



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 24/172 (13%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GH ++  I D L R+HR+ G + L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGSLHMGHGFQEAIMDALIRYHRMAGYNTLWQVGTDHAGIATQMVVERQLEAK 95

Query: 70  ---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                    + F+ +                R +   LD S + F  T ++   +  + +
Sbjct: 96  GISRHDLGREEFIKKVWEWKEESGGTITRQLRRLGSSLDWSRERF--TMDEGLSNAVQEV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + ++  +G IY+G     +        +D EV    +  +      P+   E
Sbjct: 154 FIRLYKEGLIYRGKRLVNWDPVLHTAISDLEVISEEEQGHLWHFDYPLVGGE 205


>gi|34540861|ref|NP_905340.1| valyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417357|sp|Q7MVD7|SYV_PORGI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|34397176|gb|AAQ66239.1| valyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 876

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 84/495 (16%), Positives = 159/495 (32%), Gaps = 82/495 (16%)

Query: 36  RFHRLDGLDVLFTTG------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           R+  L G  V+  T        ++    +        VT    V+      +   + +DI
Sbjct: 236 RYRWLRGKRVIVPTVGRAVPIIEDEYVDMEFGTGCLKVTPAHDVNDYMLGQKHRLESIDI 295

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
            +D+ I                 +++ G  Y G        + E    D  + +  +   
Sbjct: 296 FHDNGI-----------------LNEHGGPYAGMDRFDVRKKIEQDLIDAGLMERVENYV 338

Query: 150 YNAQHN-----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++     P++      +F ++ +     L    +    + P + +N         +
Sbjct: 339 NKVGYSERTDVPIEPKLSMQWFLQMESLAKPALDAVMNDEIKLHPAKFKNT-YRHWMENV 397

Query: 205 KDLSLSRKTFDWGIKIP------------------------------------DDPQYIM 228
           KD  +SR+   WG +IP                                          +
Sbjct: 398 KDWCISRQ-LWWGHRIPAYYLPDGSIVVAETAEKAVELARKQTGSDSLTVEDLRQDSDSL 456

Query: 229 YVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
             W  +    ++  G + +P+  +   ++P    V   DIL F    +    +      P
Sbjct: 457 DTWFSSWLWPISVFGDVMDPENEELDYYYPTSDLVTAPDILFFWVARMIMAGYEYRGKKP 516

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                 +      +G K+SKSLGN  DPI ++E+ G D +R  L+     G D  +D+  
Sbjct: 517 FDNVYLTGIVRDGQGRKMSKSLGNSPDPIMLMEKYGADGVRMGLMMAAPAGNDVLFDESL 576

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIREN 404
            ++  N        N +  +  ++         T P A   + +        V  E+ + 
Sbjct: 577 SEQGRN------FCNKIWNAFRLVKGWQQAETSTQPEASALAVKWFGYRLDEVKTELDDL 630

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
                +  AL  V  L  +     Y +  KP       P  A T    T+    QL  LL
Sbjct: 631 FSKYRLSEALTLVYKLFWDDFSSWYLEMVKP---AYGQPMDAKT-YGSTIGFFDQLLRLL 686

Query: 463 QAFVPKLANKIFDIL 477
             F+P +  +++  L
Sbjct: 687 HPFMPFITEELWHAL 701



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            R+   +           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GRKPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMKGYNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
                           +        +  ++     +    L  S D + R   T ++   
Sbjct: 92  VGRLAAQGISKQDLGREEFLRHAWDWTHEHGGIILEQLKRLGASCD-WTRTAFTMDESRS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++   ++  + +KG IY+G     +  +     +D+EV  
Sbjct: 151 ESVIKVFVDLYNKGLIYRGIRVVNWDPKALTALSDEEVIY 190


>gi|302879726|ref|YP_003848290.1| valyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582515|gb|ADL56526.1| valyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 941

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 133/393 (33%), Gaps = 64/393 (16%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           + +P  W+     +      QD  +S        I      N  +   ++  +   L+ K
Sbjct: 394 KFHPENWVNTYNQWLNN--IQDWCISRQLWWGHQIPAWYGVNGEVFVARTEAEARHLADK 451

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G    D    ++  W  +     +T  + +         +     P+ + V G DI
Sbjct: 452 AGYAG--QLDRDNDVLDTWFSSALWPFSTLDWKEGQPFDAQNEFVKRYLPSTVLVTGFDI 509

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------ 319
           + F    +      ++  +P             +G+K+SKS GNV+DPI++I+       
Sbjct: 510 IFFWVARMVMMTKHITGRIPFKDVYVHGLIRDSEGQKMSKSKGNVLDPIDLIDGIALEDL 569

Query: 320 -------------------------------VGVDALRYFLVREIACGKDGFYDKDGLKK 348
                                           G DALR+      + G+D  +D    + 
Sbjct: 570 IKKRTTGLMNPKQAEQIEKRTKKEFPNGIPAFGTDALRFTFASLASPGRDIKFDMQRCEG 629

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQ 406
               +  N + N  +R V M  + +D  +    P  ++ +D+ ++S+  +   E+ ++  
Sbjct: 630 --YRNFCNKLWN-ATRFVLMNCEGHDVGLDESLPLEYSAADQWMISLLQQAEAEMAQHFA 686

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQK----PWELKKTNPDRAS-TVLYVTVEVIRQLA 459
                 A   V  LV     D Y +  K       L+  + +          V V+  + 
Sbjct: 687 AYRFDMAARCVYELVWNTYCDWYVELAKVQLQDRGLRIEDAEAQQRATRRNLVRVLETIL 746

Query: 460 ILLQAFVPKLANKIFD----ILFVADENRCFQS 488
            +    +P +  +++     +  ++ E+   Q+
Sbjct: 747 RMAHPIIPFITEELWQSVAPMAGMSGESIMLQA 779



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 22/223 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I           H+GH +   + D L R+HR+ G + L+  GTD  G       
Sbjct: 34  KTESFCIQLPPPNVTGTLHMGHGFNQTLMDTLTRYHRMRGDNTLWQPGTDHAGIATQIVV 93

Query: 63  Q--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    KV+  +       +R  R +    D   + F  T ++  
Sbjct: 94  ERQLDAQGISRHDLGREAFIEKVWEWKKFSGDTITRQMRRLGTSPDWQRERF--TMDEGL 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             +    + ++ ++G IY+G     +  +     +D EV +  +  +      P+  ++ 
Sbjct: 152 SQSVTETFVRLFNEGLIYRGKRLVNWDPKLHTAVSDLEVVQEEEDGFMYHIRYPLAEVDT 211

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                 L+    +  +        I P + R + +      L 
Sbjct: 212 LHGLTHLTVATTRPETLLGDVAVMIHPEDERYQHLIGKMVRLP 254


>gi|15223829|ref|NP_172913.1| TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide
           binding / valine-tRNA ligase [Arabidopsis thaliana]
 gi|21542452|sp|P93736|SYV_ARATH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|332191069|gb|AEE29190.1| Valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1108

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 138/431 (32%), Gaps = 64/431 (14%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +        ++ + Y N   + K A       ++  ++++ ++         +
Sbjct: 491 MRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRRWLE 550

Query: 174 DKLLSYYESHPEF--ILPIER--------------RNEVISFVKSGLKDLSLSRKTFDWG 217
           +           +   +P                  +  +            ++K     
Sbjct: 551 NIRDWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKK 610

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            ++  DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    +  
Sbjct: 611 FELTRDPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFFWVARMVM 668

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L   +P  K  F        G K+SKSLGNVIDP+EVI  V ++ L   L      
Sbjct: 669 MGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLD 728

Query: 336 GKDGFYDKDGLKK--------------------------RVNADL-----ANGIGNLVSR 364
            K+    K+G  K                          ++N D+          N +  
Sbjct: 729 PKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWN 788

Query: 365 SVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +V   +         P   +        + ILSV ++ + +   ++       A   + +
Sbjct: 789 AVRFAMMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAISKTVVSLDAFEFSDAANTIYA 848

Query: 420 LVS--EVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                  D Y +A KP      NP    +RA     + +  +     LL  F+P +  ++
Sbjct: 849 WWQYQFCDVYIEAIKP-YFAGDNPTFASERAHAQHALWI-SLETGLRLLHPFMPFVTEEL 906

Query: 474 FDILFVADENR 484
           +  L    +  
Sbjct: 907 WQRLPAPKDTE 917



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA    I D + R+ R+ G + L+  G D  G      
Sbjct: 165 SSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGVDHAGIATQVV 224

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + +Q           L  S D      T +++ 
Sbjct: 225 VEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSRECFTMDEQR 284

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++  +G IY+      +  
Sbjct: 285 SKAVTEAFVRLYKEGLIYRDIRLVNWDC 312


>gi|149245086|ref|XP_001527077.1| valyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449471|gb|EDK43727.1| valyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 1103

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 81/525 (15%), Positives = 164/525 (31%), Gaps = 91/525 (17%)

Query: 36  RFHRLDGLDVLFT-------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  L G  VL           TDE    +        +T     +  +   ++  + ++
Sbjct: 400 RYKHLHGKYVLHPFLDRKLPIVTDEEAVDMEFGTGAVKITPAHDQNDYNVGKKNNLEFIN 459

Query: 89  ISYD----------------DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
           I  D                 F    + R     ++  K +      ++          D
Sbjct: 460 IYTDDGLLNENCGPEWQGMKRF----DARAKAIEQLKAKGLFVDQKDHEMVIPICSRSGD 515

Query: 133 --------EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
                   + Y N  ++ K A     N +        E+ YF+ L   QD  +S      
Sbjct: 516 VIEPLLKPQWYVNQQQMAKDAIAAVKNGEIKITPKSSEQEYFYWLENIQDWCISRQLWWG 575

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-----------PQYIMYVWID 233
               P+   N              +S ++ +  ++  ++            + ++  W  
Sbjct: 576 HRC-PVYFVNIEGEEHDRLDNKYWISGRSEEEALQKANEKFAGKKFTLEQDEDVLDTWFS 634

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +    ++T G+ +     +    P  +   G DIL F    +   +  L+  +P  K+VF
Sbjct: 635 SGLWPISTLGWPNKTKDLELFS-PMSMLETGWDILFFWVTRMVLMSLKLTGKVPF-KEVF 692

Query: 292 SHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG----------- 339
            H  +   +G K+SKSLGNVIDP++V+  + +  L   L+      ++            
Sbjct: 693 CHSLVRDAQGRKMSKSLGNVIDPLDVVNGISLQGLHDKLLTGNLDPRELKKATEGQKISY 752

Query: 340 ------------------------FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-- 373
                                     + D L+        N I       +  +  DY  
Sbjct: 753 PNGIPECGTDALRFALCAYSTGGRDINLDILRVEGYRKFCNKIYQATKFVLGRLGDDYVP 812

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQK 432
                  G  T  ++ IL   S   +   E ++ + +  +   + +      D Y +  K
Sbjct: 813 PKSASLTGKETLVEKWILDRLSTAAKNTNEALEARNMGDSTNHIYNFWYDLCDVYIENSK 872

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 T P++  +        I     L+  ++P +  +++  L
Sbjct: 873 SLIQDGT-PEQKKSAQDTLYTSIDGALRLIHPYMPFITEEMWQRL 916



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 40/134 (29%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G   LF  G D  G       +   
Sbjct: 184 FSIPCPPPNVTGALHIGHALTVSIQDTLIRWNRMQGKTTLFIPGFDHAGIATQSVVEKQI 243

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T          
Sbjct: 244 WAKEQKTRHDYGREKFVEKVWEWKEEYHSRIKNQFKKLGASYDWSRERFTLNPDLSAAVT 303

Query: 108 ILWKKISDKGDIYK 121
             + ++ + G IY+
Sbjct: 304 EAFVRMHEDGTIYR 317


>gi|66802566|ref|XP_635155.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996551|sp|Q54ET5|SYLM_DICDI RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=LeuRM; AltName: Full=Leucine--tRNA ligase; Flags:
           Precursor
 gi|60463472|gb|EAL61657.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 940

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 6/241 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K Y  +   YP+   H+GH     I+D +AR  R+ G DV+   G D  G     AA
Sbjct: 43  DNNKFYSLSQFPYPSGALHMGHVRVYTISDCIARLKRMQGYDVIHPMGWDAFGLPAENAA 102

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V+   + + N  + RD   +L+    +D  + T  K ++   + ++ ++   G  Y
Sbjct: 103 IDKQVSPSEWTNLNISSMRDQLKLLNFQFDWDRELSTCNKEYYRWTQEIFLRLLKSGLAY 162

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V            +  V+  E + +F+++++  D+L    
Sbjct: 163 RKSATVNWDPIDQTVLANEQVDAQ---GRSWRSNAIVEKKEMKQWFYKITSMADRLTDDL 219

Query: 181 ESHPEF-ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           +  P +       + E I      L +     +     I +       +Y       +  
Sbjct: 220 DQLPGWSDEIKNMQKEWIGRSYGHLIEFQSCAQKPLSNITVFTTRAETIYGVSFLAISPH 279

Query: 240 T 240
            
Sbjct: 280 H 280



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N IDP E+I++ G D L+ +++ +    K   +D  G++  K+    +   I
Sbjct: 652 EKMSKSKLNGIDPKEIIDKYGSDTLKTYILFKAPPEKSLDWDTQGIEGCKKWLTRINVSI 711

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF-----------TESDESILSVCSRVLQEIRENMQN 407
            + +++   +  K+                      ++  + IL      + ++ E++  
Sbjct: 712 QSFLNQFDVIEGKEQHQHQQQQHQQPLPSSEFNEQQSKEVKDILFETHLTMNKVTESIDK 771

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              +  +A ++ L +             L+K++P    T  Y   + +R L ++L  F P
Sbjct: 772 HSFNTGIAALMELSN------------TLQKSSPQIKLTKEY--YQSLRALTLMLFPFSP 817

Query: 468 KLANKIFDIL 477
             +   +  L
Sbjct: 818 IFSQIHWKSL 827


>gi|332176353|gb|AEE12043.1| Isoleucyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 1137

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 106/299 (35%), Gaps = 8/299 (2%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P +   E    +      +         G +       ++ VW D+         Y  
Sbjct: 571 FTPGDYSEENYDKIDLHRPYVDEITLVTQDGKRPMHRESDLIDVWFDSGAMPFAQVHYPF 630

Query: 247 NPDGS--KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    K +PAD    G D     F  ++  A +   ++     + +   +   G K
Sbjct: 631 EHREEVESGKVFPADFIAEGVDQTRGWFFTLHAIATMTQGSIAFRNVLVNGLVLDKDGNK 690

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP  +I++ G D LR++++      ++  +D  G+++              
Sbjct: 691 MSKRLGNAVDPFGIIQQYGSDPLRWYMITNANPWENIRFDPKGVEEVSRKYFGTLYNTYQ 750

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   L  +D  +         E D  ILS  + +++E+   + +     A   + + 
Sbjct: 751 FFALYGNLDGFDPSVAQIPYADRPEIDRWILSRLNSLIKEVDGKLASYDPTPAGRAIENF 810

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+E   + Y    +      +  D   +      + +  +A L+    P  A++++  L
Sbjct: 811 VTEHLSNWYVRLSRKRFWAGSMTDDKLSAYQTLYQCLSVVAQLMAPIAPFYADRLYRDL 869



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 33/113 (29%), Gaps = 12/113 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D++ R+  + G  V    G D HG  +    +     TK  
Sbjct: 49  PPSANGMPGIHHVIARSIKDIICRYKTMHGYRVDRRAGWDTHGLPVELGVEKKLGITKDA 108

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +             IS  ++ +T  K             +  G      + 
Sbjct: 109 IGKT------------ISVAEYNQTCRKEVMKYTAEWESLTNKMGYWVDMEHP 149


>gi|315452862|ref|YP_004073132.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131914|emb|CBY82542.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 864

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 133/371 (35%), Gaps = 58/371 (15%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                + ++    + +F +    +  +    +   +F  P  R N   +     L+   +
Sbjct: 340 CYRCASSIEPYISKQWFVKQEVAKGSIEKMAQGLAQFYPPHWRNN--YNAWMQELRPWCI 397

Query: 210 SRKTFDWGIKIP---------------------------DDPQYIMYVWIDALTNYLTTT 242
           SR+   WG +IP                           +    ++  W  +     +T 
Sbjct: 398 SRQ-LWWGHRIPVFTCSKGHQFVPQDLPTHCPQCQDTHLEQDSDVLDTWFSSGLWAFSTL 456

Query: 243 GYLD----------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
           G+                    F+P  + + G DIL F    +      L   LP  K +
Sbjct: 457 GFAQEGLEGFEGVKFNLNDLKDFYPNSVLITGFDILFFWVARMLLSGESLLGALPF-KHI 515

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           + H  +  + GEK+SKS GNVIDP+E+I+  G DALR+ L      G+D   +   L++ 
Sbjct: 516 YLHALVRDENGEKMSKSKGNVIDPLELIKTYGSDALRFALAMLCVQGRDLCLNPKVLEQA 575

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                ++ + N      +   ++        G +        S  +   +E+R  ++   
Sbjct: 576 --RHFSHKLYNAALFLSTQQAQEVTDYQTNLGLYA------KSRLNATTKEVRSALELYR 627

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            + A   +         D   +  K ++    N +++S V    V V ++   LL  F+P
Sbjct: 628 FNDATTALYRFFWGEFCDWVLEFSKAYK----NTEQSSRVFGELVSVFKEGLCLLHPFMP 683

Query: 468 KLANKIFDILF 478
            ++  ++  L 
Sbjct: 684 FVSEYLYQHLN 694



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 22/236 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
             +    I         + H+GHA  + + D+L RF R+DG  VL+  G D  G      
Sbjct: 30  STKPPFAIIMPPPNVTGRLHMGHALTLSLQDILVRFKRMDGYRVLYQPGLDHAGIATQNV 89

Query: 61  ------------------AAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
                             A        K     Q     +++      S   F  + +  
Sbjct: 90  VEKQLLAQGIKKEEIGREAFVKKVWEWKESCGGQIVEQMQELGISCAWSRLRF--SMDAG 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                +I +K   D+G I +  Y   +  +D A  + +  Y+   G+ Y  ++   +  E
Sbjct: 148 LERAVKIAFKTWFDQGLIVQDTYMINWCCKDGALADIEVEYEQEAGKLYYLRYLLERGGE 207

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                 R   +   +        E    +  +N ++   K  +  ++ S     +G
Sbjct: 208 VVVATTRPETFFGDVALMVHPEDERYQHLIGQNALLPLSKRPIPIIADSFVDPSFG 263


>gi|145607167|ref|XP_361568.2| hypothetical protein MGG_04042 [Magnaporthe oryzae 70-15]
 gi|145014765|gb|EDJ99333.1| hypothetical protein MGG_04042 [Magnaporthe oryzae 70-15]
          Length = 917

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 5/195 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IADV+ARF  L G  V+   G D  G     AA   G+
Sbjct: 44  YVLPMFPYPSGYLHLGHLRVYTIADVIARFRTLQGNKVMLPMGWDAFGLPAENAAIERGI 103

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              V+   N    ++  DV++ S+D    I T +   +   + ++  + +KG  Y+    
Sbjct: 104 DPAVWTKSNIARMKEQLDVMNSSWDWSREISTCDPEFYKHTQKIFLLMHEKGLAYQAEAE 163

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             Y   D+    +++V          A+   V+      +F ++S +++ LL   +   +
Sbjct: 164 VNYDPVDKTVLANEQVDANGCSWRSGAK---VEKRRLRQWFLKISEFREPLLQDLDVLAK 220

Query: 186 FILPIERRNEVISFV 200
                ER        
Sbjct: 221 DDAWPERVLTQQRHW 235



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 78/211 (36%), Gaps = 25/211 (11%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             PL K   +    L   EK+SKS  N +DP + I + G DA R  ++ +        +D
Sbjct: 632 GKPLVKA--TGEQALVTYEKMSKSKHNGVDPTDFIAQYGADATRAHMLFQAPVSDVLNWD 689

Query: 343 KDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQ 399
           ++ +    R    L   I  L  R+ S  +     +  +  + + ++D +I     + + 
Sbjct: 690 ENKISGVTRWLGKLYEAIQRLEGRAASADVSPRTFLERSRESPSWDADVTIWRHVQQTIP 749

Query: 400 EIRENMQN-QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +  + +    ++  ++ ++ L +    +R                 + T+      V  
Sbjct: 750 SVTASYERVYSLNTVVSDLMGLTNTILANR--------------DVASETIQATAASV-- 793

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            L  +L    P  A++ + IL  +     F 
Sbjct: 794 -LLRMLAPITPAFADECWSILHASSAGSIFA 823


>gi|212212732|ref|YP_002303668.1| valyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011142|gb|ACJ18523.1| valyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 920

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 138/395 (34%), Gaps = 86/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++ A     +   ES     +P       + ++   ++D  +SR+   W
Sbjct: 348 IEPLLTDQWFIKMEALAKPAMEAVESGELKFIPKNWEKTYLQWLS-NIQDWCISRQ-LWW 405

Query: 217 GI--KIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G    +  D +                             ++  W  A      T G+ +
Sbjct: 406 GHRLPVWYDEEKNSYVGRSREEILKKYHLSPDVKLQQETDVLDTWFSASLWPFATLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KG 300
             +  K  F+P  + V G DI+ F    W A ++   L L  K+  H   +H      +G
Sbjct: 466 KTESFKT-FYPTQVLVTGFDIIFF----WVARMVMMGLKLTHKIPFHSVYIHGLIRDSQG 520

Query: 301 EKISKSLGNVIDPIEVIEE-------------------------------------VGVD 323
            K+SKS GNVIDPI++I+                                       G D
Sbjct: 521 RKMSKSKGNVIDPIDIIDGISLDALIEKRTHALLQPKMAKTIEKMTRKEFPNGIASFGTD 580

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+      + G+D  +D   +      +  N I N  +R V+M  ++ D     P ++
Sbjct: 581 ALRFTFCALASRGRDINFDMGRIDG--YRNFCNKIWN-AARFVTMNTQEKDLNPEKPLSY 637

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT-N 440
           + +DE I +   + ++   E +           +         D Y +  K     K   
Sbjct: 638 SAADEWIRTRLQQTIKNAEEALSQYRFDLLAQTLYEFTWNEYCDWYVEFAKCILYDKQAK 697

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        +EV+  L  LL   +P +  +I+ 
Sbjct: 698 PAQLRGTRVTLLEVLEILLRLLHPVMPFITEEIWQ 732



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GH ++  + D L R+HR+ G   L+  GTD  G       +    
Sbjct: 34  CIMLPPPNVTGTLHMGHGFQQTLMDTLIRYHRMKGERTLWQGGTDHAGIATQMVVEQQLA 93

Query: 68  TT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      + F+ +                R +   +D S + F  + ++       
Sbjct: 94  QEDLTREDLGRQAFIKRVWEWRERSGGKITHQMRRLGVSIDWSRERF--SMDEGLSRATT 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  +G IY+G     +  +     +D EV       +      P+
Sbjct: 152 EAFIRLHHEGLIYRGKRLVNWDPKLNTAISDLEVVTEEVEGHLWHIRYPL 201


>gi|294054919|ref|YP_003548577.1| leucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614252|gb|ADE54407.1| leucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 859

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 3/212 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++   Y+     YP+    HIGH      +D L R+ +  G +VL   G D  G    +
Sbjct: 33  EDQPTFYVLDMFPYPSGAGLHIGHPEGYTASDALKRYKKAKGFNVLHPMGWDAFGLPTEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G        QN  NF      L  +YD    + TT+  +    + ++ ++  KG 
Sbjct: 93  YAIKTGTHPATTTKQNVANFTAQLSQLGFAYDWNREVNTTDPNYFKWTQWIFMQLFKKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y      W+         ++EV   A+G      + PV+      +  R++ Y ++L++
Sbjct: 153 AYVDEKPVWFCPELGTVLANEEVLNTAEGPRSERGNFPVERRPIRQWVLRITEYAERLIA 212

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +           +   I   + G     +S
Sbjct: 213 GLKDLDWPDSTKRLQENWIGRSEGGEITFDVS 244



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 106/274 (38%), Gaps = 41/274 (14%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPA-DLHVIGKDILRFHA 272
           G          M  W  +   YL      +     D  K ++W   DL++ G +    H 
Sbjct: 532 GWITGIRETNTMPQWAGSCWYYLRYIDPKNGTALIDPEKEQYWGTPDLYIGGAEHAVLHL 591

Query: 273 IYWPAFL-------LSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDA 324
           +Y   +        + ++    KK+F  G IL   GEK+SKS GNV++P  +IE  G DA
Sbjct: 592 LYARFWHQVLFDLGVVSDPEPFKKLFHQGIILGEDGEKMSKSRGNVVNPETIIEGYGADA 651

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR +L+          ++  G++         GI   + +   +++ +   +    GA  
Sbjct: 652 LRCYLMFLGPLEAMKPWNTKGIE---------GIARFLRKVWRLVVDNDGQISTKIGASD 702

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D     V    ++++ E+ ++   + A++Q++  V+         K   L K+     
Sbjct: 703 ALDPESDRVLHATIKKVSEDYESLGFNTAISQMMICVN------QLAKAEALPKS----- 751

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                    V+     LL    P +  ++++ L 
Sbjct: 752 ---------VVESFLKLLAPLAPHIGEELWERLG 776


>gi|188995093|ref|YP_001929345.1| valyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|254783555|sp|B2RK53|SYV_PORG3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|188594773|dbj|BAG33748.1| valyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 876

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 84/495 (16%), Positives = 159/495 (32%), Gaps = 82/495 (16%)

Query: 36  RFHRLDGLDVLFTTG------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           R+  L G  V+  T        ++    +        VT    V+      +   + +DI
Sbjct: 236 RYRWLRGKRVIVPTVGRAVPIIEDEYVDMEFGTGCLKVTPAHDVNDYMLGQKHRLESIDI 295

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
            +D+ I                 +++ G  Y G        + E    D  + +  +   
Sbjct: 296 FHDNGI-----------------LNEHGGPYAGMDRFDVRKKIEQDLIDAGLMERVENYV 338

Query: 150 YNAQHN-----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++     P++      +F ++ +     L    +    + P + +N         +
Sbjct: 339 NKVGYSERTDVPIEPKLSMQWFLQMESLAKSALDAVMNDEIKLHPAKFKNT-YRHWMENV 397

Query: 205 KDLSLSRKTFDWGIKIP------------------------------------DDPQYIM 228
           KD  +SR+   WG +IP                                          +
Sbjct: 398 KDWCISRQ-LWWGHRIPAYYLPDGSIVVAETAEKAVELARKQTGSDSLTAEDLRQDSDSL 456

Query: 229 YVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
             W  +    ++  G + +P+  +   ++P    V   DIL F    +    +      P
Sbjct: 457 DTWFSSWLWPISVFGDVMDPENEELDYYYPTSDLVTAPDILFFWVARMIMAGYEYRGKKP 516

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                 +      +G K+SKSLGN  DPI ++E+ G D +R  L+     G D  +D+  
Sbjct: 517 FDNVYLTGIVRDGQGRKMSKSLGNSPDPIMLMEKYGADGVRMGLMMAAPAGNDVLFDESL 576

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDESILSVCSRVLQEIREN 404
            ++  N        N +  +  ++         T P A   + +        V  E+ + 
Sbjct: 577 SEQGRN------FCNKIWNAFRLVKGWQQAETATQPEASALAVKWFGYRLDEVKTELDDL 630

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
                +  AL  V  L  +     Y +  KP       P  A T    T+    QL  LL
Sbjct: 631 FSKYRLSEALTLVYKLFWDDFSSWYLEMVKP---AYGQPMDAKT-YGSTIGFFDQLLRLL 686

Query: 463 QAFVPKLANKIFDIL 477
             F+P +  +++  L
Sbjct: 687 HPFMPFITEELWHAL 701



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            R+   +           H+GH     I D+L R  R+ G +  +  GTD          
Sbjct: 32  GRKPYTVVIPPPNVTGVLHMGHMLNNTIQDILVRRARMKGYNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
                           +        +  ++     +    L  S D + R   T ++   
Sbjct: 92  VGRLAAQGISKQDLGREEFLRHAWDWTHEHGGIILEQLKRLGASCD-WTRTAFTMDESRS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++   ++  + +KG IY+G     +  +     +D+EV  
Sbjct: 151 ESVIKVFVDLYNKGLIYRGIRVVNWDPKALTALSDEEVIY 190


>gi|254293695|ref|YP_003059718.1| valyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042226|gb|ACT59021.1| valyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 1032

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 103/304 (33%), Gaps = 53/304 (17%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
           +    + ++  W  +     +T G+ D       KF+P    V G DI+ F         
Sbjct: 544 LVYQDEDVLDTWFSSALWPFSTMGWPDKTP-ELDKFYPTATLVTGFDIIFFWVARMMMQG 602

Query: 280 LSANLPLP-KKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEE------------------ 319
           +     +P K V+ H  +L   G+K+SKS+GNVIDPI++I+                   
Sbjct: 603 IHFMKEVPFKDVYIHALVLDEDGKKMSKSIGNVIDPIDIIDGCDFDTLIAKRVRDIKKTG 662

Query: 320 --------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                                      G DALR+ L  + A G+D     D +      +
Sbjct: 663 NEKKDKAAEKAITNKTKQQFPDGIPACGTDALRFTLASQAAQGRDIRLSIDRVVG--YRN 720

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHR 412
               + N            ++     P       ++ I+S  ++   +I +N+     + 
Sbjct: 721 FGTKLWNAARFCEMNECALWEQHEFDPLKVEHTLNKWIVSEVAKATADITKNIDEYRFND 780

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           A +           D Y +  KP  L   +    +         + Q+  LL  F+P + 
Sbjct: 781 AASAAYKFTWHVFCDWYLELMKP-LLNGDDETAKAETRKTAAWTLNQIIHLLHPFMPFIT 839

Query: 471 NKIF 474
             ++
Sbjct: 840 EALW 843



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 23/186 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--- 63
             I           H+GHA    + D+L R+ R+ G DVL+  GTD  G       +   
Sbjct: 38  YSIVIPPPNVTGVLHMGHALNNTLQDLLCRYQRMQGKDVLWQPGTDHAGIATQMVVERQL 97

Query: 64  -----------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                                  K     Q     + +    D S + F  T ++     
Sbjct: 98  AAEGNQSAASLGRDKFIERVWEWKEKSGGQIINQLKRLGASCDWSRERF--TLDEGLSKA 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              ++ ++  +  IY+      +    ++  +D EV       +      P+Q  E   Y
Sbjct: 156 VTKVFVELHQQKLIYRDKRLVNWDPHFQSAISDLEVDNVEVDGHMWHFKYPLQGGETYTY 215

Query: 166 FFRLSA 171
             +   
Sbjct: 216 VEKDED 221


>gi|322705718|gb|EFY97302.1| leucyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 961

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 5/193 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +R+  Y+     YP+   H+GH     IAD +AR+HRL G DVL   G D  G     A
Sbjct: 80  SDRKTNYVLPMFPYPSGSLHLGHLRVYSIADTVARYHRLKGDDVLLPMGWDAFGLPAENA 139

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   V+   N +  ++    ++ S+D    +   +   +   + L+  + ++G  
Sbjct: 140 ALERGIDPGVWTRSNIKKMKEQLGSMNGSWDWSRELTACDPEFYKHTQKLFLMLRERGLA 199

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  + + +FFR S Y++ LL  
Sbjct: 200 YQAEAEVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKRKLKQWFFRTSEYREALLRD 256

Query: 180 YESHPEFILPIER 192
            +         ER
Sbjct: 257 LDELAMNNAWPER 269



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 79/222 (35%), Gaps = 32/222 (14%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK + +        EK+SKS  N +DP E I + G DA R  ++ +   G    +D+  +
Sbjct: 675 PKIMATGVPAKVAFEKMSKSKHNGVDPTECIAKYGADATRAHMIFQAPVGDILNWDEAKI 734

Query: 347 --KKRVNADLANGIGNLV----SRSVSMILKD----YDGMIPTPGAFTESDESILSVCSR 396
               R    L + +  +     SR    +L++       M        ++D ++      
Sbjct: 735 SGVTRWLQRLHDQVVAVATADESRPAKDLLEEKFGRVGSMSSEELTHWDADAALWREVQH 794

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            +  + ++      ++  ++ ++ L +             L  +  + A     +     
Sbjct: 795 TIASVTQSYDEVYSLNTIVSDLMRLTN------------TLAGSQANEA-----IKKHAC 837

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSLDQRL 493
             L  L+    P  A++ + +L  +     +   F S D  L
Sbjct: 838 NILTRLVAPITPAFADECWSVLHPSKGLIFDTSTFPSQDGTL 879


>gi|241956714|ref|XP_002421077.1| mitochondrial leucyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
 gi|223644420|emb|CAX41234.1| mitochondrial leucyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
          Length = 923

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  EK Y      YP+   HIGH     I+DV+AR+ R  G +V+   G D  G     A
Sbjct: 53  ETNEKFYSLAMFPYPSGVLHIGHLRVYTISDVVARYKRSKGFNVIHPMGWDAFGLPAENA 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    + + N    ++  +     +D    + T+   ++   + ++  + ++G  
Sbjct: 113 AVERNINPSEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFLMLFERGLA 172

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V               V+    E +F  ++ Y  +L   
Sbjct: 173 YRKAAEINWDPVDNTVLANEQVDAE---GRSWRSGAIVEKRNLEQWFIGITKYAKELNYD 229

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++   +      +G
Sbjct: 230 LKNLPDWPEKVKIMQKNWIGESNG 253



 Score = 44.0 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 64/192 (33%), Gaps = 27/192 (14%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-----RVNADL 354
            EK+SKS  N  DP E IE+ G D +R  L+          + ++ +       R    L
Sbjct: 654 FEKMSKSKHNGADPGEFIEKYGADVIRAHLLFSAPVSDTLNWQEEQISGTDRWLRRVIQL 713

Query: 355 ANGIGNLVSRSVS---------MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            + I  +                   + + +      F   +  + +     +Q I  ++
Sbjct: 714 GDSITEIPKNQFKTESSGSSQTFQNVNLNKVRYDTIEFNSQELELYNSVQGYVQSIASSI 773

Query: 406 Q-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +    ++  ++ ++ + + +       K +               +  +  ++L I   +
Sbjct: 774 EVKFSLNTIVSDLMKMTNTISEAIKDTKTYN------------QDLIFDSYQKLLICTSS 821

Query: 465 FVPKLANKIFDI 476
             P  A + ++ 
Sbjct: 822 VTPATAEECWER 833


>gi|59410396|gb|AAW84295.1| putative isoleucyl-tRNA synthetase [uncultured Poribacteria
           bacterium 64K2]
          Length = 1060

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 73/420 (17%), Positives = 136/420 (32%), Gaps = 42/420 (10%)

Query: 70  KVFVDQNSRNFRDMADVLDISYDD---FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
             +  Q    F    D   + Y     FIRTT  R              +          
Sbjct: 395 AEYTHQYP--FCWRCDTPLLYYARESWFIRTTAIRDQMHQHNQEINWYPE---------- 442

Query: 127 WYSLRDEAY--YNDDEVYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESH 183
              ++D  +  + ++ +  G   + Y     PV    + E      S  + K L    S 
Sbjct: 443 --HIKDGRFGNWLENNIDWGLSRERYWGTPLPVWVCDDCEHQHCVGSIAELKELGTDVSD 500

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
              +      + V++  K       +               Q ++  W D+   +     
Sbjct: 501 DIELHRPYVDDVVLACEKCNGTMRRV---------------QDVIDCWFDSGCAHTAQWH 545

Query: 244 YLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y         + +PAD      D     F+++     LL         +     +   G+
Sbjct: 546 YPFENKEMLEQAYPADFISEAIDQTRGWFYSLLATGTLLYDKPAYKNCLCLELIMGPDGQ 605

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GN IDP  ++ E G DA+R+++           +  +G+ + +       + N+
Sbjct: 606 KMSKSRGNTIDPWTILNEQGADAMRWYMFTATTPWTPRAFKSEGIDEAL-KKFMGTLQNV 664

Query: 362 VSRS-VSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
            S   +   L+  D     P        D  ILS    ++  +R+ M+N  +  A   + 
Sbjct: 665 YSFFVMYANLERVDVLHEAPPVSERATVDRWILSRLHTLIDRVRDEMENYHLTNAPRAIE 724

Query: 419 SLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             V ++ + Y    +                    EV+  +A L   FVP  A++++  L
Sbjct: 725 LFVDDLSNWYVRRSRDRFWGAEAGPDKHAAYATLYEVLVTVAKLAAPFVPFFADELYRNL 784



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+           + NA P + H    I+ D + R+  + G  V    G D HG  +   
Sbjct: 48  KDAPSFVFLEGPPFANAPPGVHHVLARIMKDAVCRYKTMTGHYVHRKAGWDTHGLPVEYQ 107

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       K  V Q  +++R M + +    + DD   T    +
Sbjct: 108 VEKQLNITNKAELEAYGVQNFIEKCKENVFQYEQDWRQMTERIGFWVNLDDAYITLSNDY 167

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + ++  DK  +Y+G     Y  R        EV  G  
Sbjct: 168 IESVWWILRQAWDKELLYQGHKVQPYCYRCGTTLASHEVALGYQ 211


>gi|87124459|ref|ZP_01080308.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168031|gb|EAQ69289.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 876

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++  Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 45  EGQKAFYALSMFPYPSGTLHMGHVRNYVITDVIARAQRMRGDAVLHPMGWDAFGLPAENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV    + D+N    +   + L   I ++    T    ++   + L+ ++   G  
Sbjct: 105 AIERGVNPADWTDRNIAQMKAQLNRLGLSIDWEREQATCHDDYYRWTQWLFLELHAGGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V    DG+ + +    V+  +   +F R++ Y D LL  
Sbjct: 165 YQKEATVNWDPIDQTVLANEQV--DGDGRSWRSGA-LVEQRKLRQWFLRITDYADALLDD 221

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   +            G
Sbjct: 222 LEQLQGWPERVRTMQANWIGRSRG 245



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        + 
Sbjct: 633 FEKMSKSKHNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLW 690

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVI 418
            LV ++    +      +P P   +  D          +  I E++      + A+++++
Sbjct: 691 RLVDQADGCGVA-LPTPLPLPTELSSEDREARRAVHSAIAAIDEDLSGELQFNTAISELM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L + +    D         + P R         E +  L  LL  F P LA + +  L 
Sbjct: 750 KLANALGGSLDQL-------SEPVRQ--------EALSALIRLLAPFAPHLAEEFWQRLG 794


>gi|289640973|ref|ZP_06473143.1| isoleucyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289509288|gb|EFD30217.1| isoleucyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 1120

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/408 (17%), Positives = 124/408 (30%), Gaps = 64/408 (15%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +    H P+ +     ++ R +A  D+LL+   +      P   ++        G 
Sbjct: 454 HSYPHCWRCHTPLIYYPLPSWYIRTTAIADRLLAE--NERTDWHPPRIKHGRYGEWLRGN 511

Query: 205 KDLSLSRKTFDWGIKIPD-----DPQY--------------------------------- 226
            D +LSR    WG  +P      DP +                                 
Sbjct: 512 VDWALSRNR-YWGTPLPIWRCTADPAHLTCVGSLLELSSLAGRDLSGLDPHRPFVDEVTI 570

Query: 227 --------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                         ++ VW D+        G         A  +PA       D     F
Sbjct: 571 ACPDCSAVARRVPDVIDVWYDSGAMPFAQWGAPHRNREEFAAQYPAQYICEAIDQTRGWF 630

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + +     L+         +     +  +G K+SK LGNV+DP E+ E  G DA+R+ ++
Sbjct: 631 YTLMAIGTLVFDRSSYETVLCLGLLLDSEGRKMSKHLGNVLDPFELFERHGADAVRWLML 690

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESD 387
              +   D     + L+  V   L           +      +         P A    D
Sbjct: 691 AAGSPWSDRRVGHEALEDIVRKVLLTYWNTASFFVLYANAAGWAPGRTPTAEPPARPVLD 750

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
              LS     + E+ E +      RA  ++   + E+  ++  +      + +PD   T 
Sbjct: 751 RWALSELHATIIEVTEALDGFDALRAGRRLTRFIDELSNWYVRRSRRRFWEADPDALET- 809

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  +  L  LL  F+P L + ++  L          S+     P
Sbjct: 810 ---LYTCLDGLTRLLAPFIPFLTDTLWSKLAAGVRADAPDSVHLADWP 854



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT- 69
               N +P  H  H    +  D+  RF  + G  V    G D HG  +  A +     T 
Sbjct: 84  PPTANGRPGTH--HVEARVFKDLFPRFRTMRGFHVPRRAGWDCHGLPVELAVEKELGFTS 141

Query: 70  ----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +  V ++  +F  M + +      D+  RT +  + ++     +
Sbjct: 142 KSDIEDFGIAEFNARCRESVLRHVADFSRMTERMAYWCDLDNAYRTMDTPYIESVWWSLR 201

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +I D+G + +      Y  RDE   +D EV +G +
Sbjct: 202 QIFDRGLLVEDHRVTPYCPRDETPLSDHEVSQGYE 236


>gi|15604286|ref|NP_220802.1| leucyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226188|sp|Q9ZDB1|SYL_RICPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3860978|emb|CAA14878.1| LEUCYL-TRNA SYNTHETASE (leuS) [Rickettsia prowazekii]
 gi|292572035|gb|ADE29950.1| Leucyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 828

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + HIGH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHIGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       + +   N    +     +  +YD    I + +  ++   +  + ++ D+  +
Sbjct: 84  AIKNNSRPQDWTYSNIEYMKKQLQSMGFAYDWTREINSCDPEYYKHEQKFFLELYDRNLV 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            ++    + +F +++ Y ++LL+ 
Sbjct: 144 YQKESLVNWDPVDNTVLANEQVVDG----RGWRSGAIIEKRYLKQWFLKITDYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  ++   +    E      +G
Sbjct: 200 IQNLKDWPAAVRVMQEEWIGKSTG 223



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 123/374 (32%), Gaps = 33/374 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          K C       +D      D+V   ++        +   W     
Sbjct: 406 ISRQRFWGCPIPMIHCKTCGVVPVPYKDLPVTLPDDVSFDSNYNPLEHHSS---WKYVNC 462

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                SA ++           +       +  +        +  L    +  GI+     
Sbjct: 463 PKCDNSAIRETDTFDTFFESSWYFTRYCNSNAVEMTDKKACNYWLPVDKYIGGIEHA--- 519

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        L       +        +   + +        +   +PA ++    
Sbjct: 520 --VMHLLYARFFTKLMNEHNYVSIREPFKGLFTQGMVLHATYKDENNNWLYPAEVVKKGN 577

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  +   +  + EK+SKS  N+ID   + E+   DA+R F++ +    KD  +   
Sbjct: 578 EFFHKENNTRVVQGRIEKMSKSKKNIIDLETIREQYSADAIRLFVLSDSPPEKDLEWSAS 637

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   N + N+     S+               +E ++ +  +    ++ + ++
Sbjct: 638 GIEG--CSRFINKLENMFEAIFSL----------KDDMKSEINKDLNRLIHLTIKHVADD 685

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           ++   ++RA+A++ +L + +  Y++  K       +     T+ Y        L  LL  
Sbjct: 686 IKTFSLNRAIARMRTLTNAI--YYEISK-------DRIDVRTIKY----GFNVLVQLLNP 732

Query: 465 FVPKLANKIFDILF 478
           F+P +  +I+  L 
Sbjct: 733 FIPHITEEIWQKLG 746


>gi|270307623|ref|YP_003329681.1| leucyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153515|gb|ACZ61353.1| leucyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 813

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 6/194 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL+G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLNGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHHIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V  G           P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQVVDGT----CWRCETPTTRRDLEQWFFRITNYADELKDHEG 207

Query: 182 SHPEFILPIERRNE 195
                 +   +RN 
Sbjct: 208 LDWPEKITAMQRNW 221



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 113/286 (39%), Gaps = 38/286 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D  K ++W P DL+  G +    H  Y   
Sbjct: 489 KRETDTMDTFMCSSWYFLRYTSPGYDKGPFDPEKLRYWMPVDLYTGGAEHAVMHLFYSRF 548

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F        ++    P  KK+F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L
Sbjct: 549 FTKALRDMGIIDFGEPF-KKLFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYL 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      + G ++  GL          G+   ++R  ++    +        A  E++  
Sbjct: 608 MFVGPWDQGGEWNDSGLS---------GMSRWLNRVWNL----FTEEYTPKTASAEAERE 654

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + +++I  +++    +  +A ++ L + + ++              + A+    
Sbjct: 655 LKRTLHQTIKKITMDIERLRFNTVVAALMELSNSLAKF-------------KEAAAISAE 701

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRL 493
                ++  A++L    P +A +++  L +  +  N+ +   D+ L
Sbjct: 702 SWQNSLKTFALMLAPIAPHIAEELWANLGMEYSIHNQSWPKWDEEL 747


>gi|315077594|gb|EFT49650.1| leucyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327452996|gb|EGE99650.1| leucyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 826

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLLDDI 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
                      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 213 ------DQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|281358414|ref|ZP_06244895.1| leucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315037|gb|EFA99069.1| leucyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 851

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++ R+ R+ G +VL   G D  G    + 
Sbjct: 31  DKPKYYVLDMFPYPSGAGLHVGHPEGYTATDIICRYRRMKGDNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V   +N  NFR     L  SY  D  I TT+  +    + ++ ++  KG  
Sbjct: 91  AVETGTHPEVTTQKNVDNFRRQIKSLGFSYDWDREINTTDPGYFKWTQWIFMQLHKKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++EV  G         ++PV+    + +  R++ Y ++LL  
Sbjct: 151 YLDEVAVNWCPALGTVLANEEVIDG----RSERGNHPVERRPMKQWMLRITEYAERLLQD 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         E +   I
Sbjct: 207 LDELDWPEGVKEMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 107/314 (34%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D +K K+W P DL+V G +    H +Y   +    
Sbjct: 511 PQWAGSCW--YYLRYIDPKNPDQAWDPAKEKYWMPVDLYVGGAEHAVLHLLYSRFWHKVL 568

Query: 280 -----LSANLPLPKKV--------------------------FSHGFILHKGE------- 301
                +S   P  K V                           +       GE       
Sbjct: 569 FDLGLVSTKEPFRKLVNQGMILGVSYKDKRGALVPTDQVDFTPNGPVRKSDGEALVEFPA 628

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV++P +VI E G D++R + +          +   G++         G+   
Sbjct: 629 KMSKSLRNVVNPDDVIREYGADSMRMYEMFMGPLEATKPWSTKGVE---------GVFRF 679

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R+  ++ +     +P            L V    ++++ +++     + A++Q++  +
Sbjct: 680 LKRAWRLVAQSEIVDVPCTPEQ-------LRVLHATIRKVSQDLDTFNFNTAISQLMIFL 732

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +E  +                       V  E   +  +LL  F P +  +++  L  A+
Sbjct: 733 NEFSK--------------------CDRVPREAAEKFVLLLSPFAPHIGEELWSTLGHAE 772

Query: 482 EN--RCFQSLDQRL 493
                 +   D+++
Sbjct: 773 TLAYEPWPVWDEKV 786


>gi|317010237|gb|ADU80817.1| leucyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 806

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I DVLAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDVLARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLRDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 111/378 (29%), Gaps = 40/378 (10%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +               +I  
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDTM----------DTFIQS 491

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LL 280
            W                 D +  K++ P D ++ G +    H +Y   F         L
Sbjct: 492 SWYFLCYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYL 551

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  
Sbjct: 552 DLDEPF-KQLVTQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELE 610

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           ++   L+          + +  +     + K     +    A   + + +     +  + 
Sbjct: 611 WNDSALEGAHR--FIKRLYDKANAINPTLSKPEFQGVSLNEAQKLARKKVYEALKKSHEI 668

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
             +       +  +A  +  ++ ++                  A     +  E    L  
Sbjct: 669 FNKAESAYAFNTLIASCMEALNALN------------------AQNNERILCEGYFVLLQ 710

Query: 461 LLQAFVPKLANKIFDILF 478
           +L+  +P  A ++ + LF
Sbjct: 711 ILEPIIPHTAWELSERLF 728


>gi|225444321|ref|XP_002264138.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302144097|emb|CBI23202.3| unnamed protein product [Vitis vinifera]
          Length = 971

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D+LARF R+ G +VL   G D  G    +
Sbjct: 110 TSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQ 169

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+   +N   FR     L  SYD    I T E  ++   + ++ ++  +G 
Sbjct: 170 YAIETGTHPKITTTRNIARFRSQLKSLGFSYDWEREISTIEPEYYKWTQWIFLQLLKRGL 229

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 230 AYQAEVPVNWCPALGTVLANEEVVDG----VSERGGHPVIRKPMRQWILKITAYADRLLE 285

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 286 DLDDLNWPESVKEMQRNWIGRSE 308



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 73/185 (39%), Gaps = 39/185 (21%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI+P +V+ E G D+LR + +          ++  G++         G+  
Sbjct: 727 HKMSKSRGNVINPDDVVLEYGADSLRLYEMFMGPFRDSKVWNTSGIE---------GVHR 777

Query: 361 LVSRSVSMIL-------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            + R+  +I+          DG +   G  T  D+  L    R + ++ E +     +  
Sbjct: 778 FLGRTWRLIVGAPLPNGAYSDGTVVVDGEPT-VDQ--LRSLHRCIDKVTEEIDGTRFNTG 834

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ ++  ++   ++   + P                    +I    +LL  + P +A ++
Sbjct: 835 ISAMMEFINAAYKW--DKHPRS------------------IIEAFVLLLSPYAPHMAEEL 874

Query: 474 FDILF 478
           +  L 
Sbjct: 875 WFRLG 879


>gi|313887291|ref|ZP_07820982.1| isoleucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923210|gb|EFR34028.1| isoleucine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 1137

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 106/299 (35%), Gaps = 8/299 (2%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P +   E    +      +         G +       ++ VW D+         Y  
Sbjct: 571 FTPGDYSEENYDKIDLHRPYVDEITLVAQDGKRPMHRESDLIDVWFDSGAMPFAQVHYPF 630

Query: 247 NPDGS--KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    K +PAD    G D     F  ++  A +   ++     + +   +   G K
Sbjct: 631 EHREEVESGKVFPADFIAEGVDQTRGWFFTLHAIATMTQGSIAFRNVLVNGLVLDKDGNK 690

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP  +I++ G D LR++++      ++  +D  G+++              
Sbjct: 691 MSKRLGNAVDPFGIIQQYGSDPLRWYMITNANPWENIRFDPKGVEEVSRKYFGTLYNTYQ 750

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   L  +D  +         E D  ILS  + +++E+   + +     A   + + 
Sbjct: 751 FFALYGNLDGFDPSVAQIPYADRPEIDRWILSRLNSLIKEVDGKLASYDPTPAGRAIENF 810

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+E   + Y    +      +  D   +      + +  +A L+    P  A++++  L
Sbjct: 811 VTEHLSNWYVRLSRKRFWAGSMTDDKLSAYQTLYQCLSVVAQLMAPIAPFYADRLYRDL 869



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 33/113 (29%), Gaps = 12/113 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D++ R+  + G  V    G D HG  +    +     TK  
Sbjct: 49  PPSANGMPGIHHVIARSIKDIICRYKTMHGYRVDRRAGWDTHGLPVELGVEKKLGITKDA 108

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +             IS  ++ +T  K             +  G      + 
Sbjct: 109 IGKT------------ISVAEYNQTCRKEVMKYTAEWESLTNKMGYWVDMEHP 149


>gi|151940903|gb|EDN59285.1| leucyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 894

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI     YP+   HIGH    +I+D L RF++  G +V+   G D  G     AA    +
Sbjct: 50  YILCQFPYPSGALHIGHLRVYVISDSLNRFYKQKGYNVIHPMGWDAFGLPAENAAIERSI 109

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++   N    +     +  +  +D  I T +  ++   + ++ K+ + G  Y+    
Sbjct: 110 NPAIWTRDNIAKMKQQMQSMLANFDWDREITTCDPEYYKFTQWIFLKLFENGLAYRKEAE 169

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V               V+  + + +F  ++ +  KL  +     +
Sbjct: 170 INWDPVDMTVLANEQVDAQ---GRSWRSGAIVEKKQLKQWFLGITKFAPKLKKHLNQLKD 226

Query: 186 FILPIERRNEVISFVKSG 203
           +   +++  +       G
Sbjct: 227 WPSNVKQMQKNWIGESVG 244



 Score = 54.0 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 21/182 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N  DP E I   G DA R  ++ +        +D+  +   +R    + +  
Sbjct: 645 EKMSKSKYNGADPNECILRHGPDATRAHILFQSPIADALNWDESKIVGIERWLQKVLHLT 704

Query: 359 GNLVSRSVSM-ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
            N++S    + I KDY     TP    +++    +   R L+ I E+ + N  ++  ++ 
Sbjct: 705 KNILSLEKDLAISKDY----KTPTDLNDAEVKFHNDFQRFLKSITESFEVNLSLNTVISD 760

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + L + +           LKK           + V+ +++L  ++   VP ++ +  ++
Sbjct: 761 YMKLTNIL-----ESA---LKKGEVR-----NEMIVQNLQKLVTVIYPAVPSISEEAAEM 807

Query: 477 LF 478
           + 
Sbjct: 808 IN 809


>gi|150007105|ref|YP_001301848.1| isoleucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|149935529|gb|ABR42226.1| isoleucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 1140

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 128/395 (32%), Gaps = 22/395 (5%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADG 147
           FIRTT  R              +            +L+D        +     +++  DG
Sbjct: 477 FIRTTACRERMIELNNTINWKPQSTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDG 536

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V+   E     +    +               P +   E    +      +
Sbjct: 537 SEEKCIGSVVELFGEIEKSVKAGFMESNPYKD-------FAPGDYTKENYEKIDLHRPYV 589

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGK 265
                    G  +  +   ++ VW D+         Y           + +PAD    G 
Sbjct: 590 DDIILVSASGKPMKRETD-LIDVWFDSGAMPYAQIHYPFENLKEFDNRQIYPADFIAEGV 648

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F  ++    ++  ++     V +   +   G K+SK LGN +DP   IE+ G D
Sbjct: 649 DQTRGWFFTLHALGTMIFDSVAYKAVVSNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSD 708

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PG 381
            LR++++   +   +  +D DG+++                ++   +  +D   P     
Sbjct: 709 PLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFDYSDPDVEWS 768

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
              E D  ILS+ + +++++   ++     RA   +   V++   + Y    +       
Sbjct: 769 KRPEIDRWILSLLNSLVKDVDGYLEAYEPTRAGRAISDFVNDNLSNWYVRLNRRRFWGGG 828

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +   +        +  +A L+    P  A+++F
Sbjct: 829 MTEDKLSAYQTLYTCLETVAKLMAPIAPFYADQLF 863



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGHPTFVFYEGPPSANGMPGIHHVIARSIKDIFCRYKTMKGFLVNRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK  +                  + ++ + D+   +   +  ++   T + R+
Sbjct: 98  VEKALGITKEDIGKKISVAEYNAACRKDVMKFTKEWEDLTQKMGYWVDMENPYITYDNRY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L K++  KG +YKG     YS            N    Y+        AQ + +
Sbjct: 158 IETLWYLLKELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCTAQFHIL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E   F    +                P    +     V   +  L++       G
Sbjct: 218 DP-KPEMAQFGDPYFLAWT----------TTPWTLPSNTALCVGPNITYLAVQTYNPYTG 266

Query: 218 IKI 220
           I +
Sbjct: 267 IPM 269


>gi|86143728|ref|ZP_01062104.1| isoleucyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85829771|gb|EAQ48233.1| isoleucyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 1136

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 93/278 (33%), Gaps = 7/278 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYW 275
           K       ++ VW D+ +       Y         + W  AD    G D     F+ ++ 
Sbjct: 598 KAMRREADLIDVWFDSGSMPYAQWHYPFENKEMVEETWRKADFIAEGVDQTRGWFYTLHA 657

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A +   ++     V +   +   G+K+SK LGN +DP   +   G DA R++++     
Sbjct: 658 IATMTFDDVAYKNVVSNGLVLDKNGQKMSKRLGNAVDPFTTLNTFGPDATRWYMISNANP 717

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSV 393
             +  +D DG+ +                S+   L ++             E D  ILS 
Sbjct: 718 WDNLKFDLDGITEIQRKFFGTLYNTYSFFSLYANLDNFTYAEADIEWKDRPEIDRWILSE 777

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
              ++ ++ +        +A   +   V E   + +    +    K        +     
Sbjct: 778 LHTLIAQVEKFYSEYEPTKATRAISDFVQENLSNWFVRLSRRRYWKGEYAHDKISAYQTL 837

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            + +  +A L     P   ++++  L         +S+
Sbjct: 838 YQCLVTVAKLGAPVAPFFMDRLYKDLNGLTNKEAAESV 875



 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 71/236 (30%), Gaps = 23/236 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  E           N  P I H     I D+  RF    G  V    G D HG  +   
Sbjct: 38  EGNEPYIFFEGPPSANGMPGIHHVMARAIKDIFCRFQTQKGKQVKRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     TK                      + D  +     M   +D+  D +I T + 
Sbjct: 98  VEKELGITKEDIGTKISVSEYNEACKNAVMRYTDVWNNLTEQMGYWVDME-DPYI-TYKP 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           ++ +T   L K I ++G IYKG     YS +     +  E+ +    Q         Q+ 
Sbjct: 156 KYMETVWWLLKNIYNQGLIYKGYTIQPYSPKAGTGLSSHELNQPGTYQDVTDTTVTAQFK 215

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
             E   ++ S       + Y             N  ++  K     L  +   + +
Sbjct: 216 VIEDETYKASPLAAFDGTKYLMAWTTTPWTLPSNTALTVGKKIDYVLVKTFNQYTF 271


>gi|212633773|ref|YP_002310298.1| valyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212555257|gb|ACJ27711.1| Valyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 971

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/416 (16%), Positives = 130/416 (31%), Gaps = 103/416 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   ++     +P +  N + +     ++D  +SR+   W
Sbjct: 374 IEPLLTDQWYVSVAPMAKTAMEAVDNGDIKFVPQQYEN-MYNSWMRDIQDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 432 GHRIPAWYDEAGKVYVGRDEAEVRAKHKLADSVVLRQDNDVLDTWFSSALWTFSTLGWPK 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           +    KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 DTAELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 VGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPKMAAKIEKSTRKEFSDGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---------- 371
            DALR+ L    + G+D  +D   L         N I N  SR V M  +          
Sbjct: 611 TDALRFTLASMASTGRDINWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQTEDAADDA 667

Query: 372 ---DYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                D         P     + +D  I+ + +  ++   E+M N     A   +     
Sbjct: 668 VGEALDCGQILVDGKPGEMELSIADRWIIGLFNETVKTYDEHMANYRFDLAANTIYEFTW 727

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP     T+  +     +  V V+ Q+  L+   +P L   I+  
Sbjct: 728 NQFCDWYLELTKPVMQNGTD-AQLRGTRHTLVNVLEQMQRLMHPMMPYLTETIWQR 782



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T ++  
Sbjct: 90  VERKVAAEEGLNRHDLGRENFIDRIWDWKNESGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +  +     +D EV              P+
Sbjct: 150 SEAVQEVFVRLYEDDLIYRGKRLVNWDPKLHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|303243869|ref|ZP_07330209.1| valyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485805|gb|EFL48729.1| valyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 885

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 142/398 (35%), Gaps = 28/398 (7%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDD-------EVYKGADGQYYNAQHNPVQWMEEEGYF 166
            + G  ++        + D+ + N         +          + +   +QW+E+  + 
Sbjct: 336 QNVGVCWRCKTPIEIIVGDQWFVNVKKLLPKVKQATDEIKWMPEHMKTRLLQWIEDMDWD 395

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +          P +  P      V       +        T   G K       
Sbjct: 396 WCISRQRLFATPI----PVWYCPDCGEIIVAKEEDLPIDPTKECPYTCKCGNKNLIPETD 451

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W+D+    +   G+LD+ +  K+  +P  L   G DI+R  A Y    +  L+   
Sbjct: 452 VLDTWMDSSITPMVIAGWLDDDEFFKS-HYPVQLRPQGHDIIRTWAFYTIIKSIALTDKK 510

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + V +       G K+SKS GN+++P E+ +  G DALR +       G D  +   
Sbjct: 511 PWDEIVINGMVFGEDGYKMSKSRGNIVEPFEITKNYGSDALRLW-AANSTLGNDVPFAWK 569

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEI 401
            +             N  SR   M L D           T     D  ILS  +R+++++
Sbjct: 570 EVD--FGYRFLRKFWN-ASRFAKMNLDDETIDTIKNINITLNNPVDLWILSKLNRLIKKV 626

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVI 455
            E++ N   +  +  +   V     D Y +  K     K N ++A        Y    VI
Sbjct: 627 SEDLNNYKFNTIVD-IQKFVWHELCDNYIEMVKYRLYNKENTEKAKISKFNAQYTLYTVI 685

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                L+  F P  A+ +  I  V + +  +  +D+ L
Sbjct: 686 TNTLKLMAPFAPHFADVVGYIYKVDNLHTSWCVVDENL 723



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GHA      D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHALNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                 +N    R+    L IS  +D    T    +    
Sbjct: 91  VEEIHGITKSDIDRHEFRKLCVELTKENIEKMREQVKSLGISIDWDREYITMNPDYVKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  + ++ +KG IY+G +   +  R +      EV  
Sbjct: 151 QTAFVRMYNKGLIYRGKHPVNWCPRCQTAIAFAEVDY 187


>gi|55379537|ref|YP_137387.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232262|gb|AAV47681.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 895

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 4/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  ARF R+ G  VL   G D  G     AA+    
Sbjct: 42  YVLAMFPYTSGSLHMGHVRNYTITDAYARFERMRGESVLHPMGWDSFGLPAENAAEERDT 101

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +  Q   + RD    +   Y  D  + T E  ++   + L+K+  ++G + +    
Sbjct: 102 NPRDWTMQCIDSMRDQLTEMGFGYDWDRELATCEPDYYQWNQWLFKQFREEGLVERQAAE 161

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +    E    D++V    +         P++  E + +FF ++ Y ++LL   +    
Sbjct: 162 LNWCPSCETVLADEQVEGEEE--LCWRCDTPIEAREMDQWFFTITDYAEELLEDLDDLEG 219

Query: 186 FILPIERRNEVISFVKSG 203
           +   +          + G
Sbjct: 220 WPNNVREMQRNWIGKQEG 237



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 103/349 (29%), Gaps = 41/349 (11%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   ++ GY           L  +       L      + +     
Sbjct: 424 WGISRQRYWGTPIPMIHCDDCGYVEVPDEDLPVELPEFVHTTGNPLDAAEEWKQVDCPDC 483

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           G   +  +            D              Y +        D  +A  W P D +
Sbjct: 484 GADAVRET------------DTMDTFVDSSWYFLRYTSPEMDEAPFDAERASDWMPVDQY 531

Query: 262 VIGKDILRFHAIYWPAFLLSAN---------LPLPKKVFSHGFILHKGEKISKSLGNVID 312
           V G +    H +Y   F    +          P          +   G K+SKSL N + 
Sbjct: 532 VGGIEHAVMHLLYARFFTKVLDDLDMVDGVREPFTNLTNQGMVLGEDGNKMSKSLDNGVS 591

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P  +IEE G D  R F++      K+  +  +G++   +      + N+ +   +    +
Sbjct: 592 PQRIIEEYGADTARLFIMEAAQPEKEFAWSPEGVQSAHS-----FLQNVYTLVSAYAEGE 646

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
                 T      +D  +               ++   + AL  V  LVS + RY +A  
Sbjct: 647 AGTATDTENGADIAD-YVAREIDATAANATAEFEDFRFNHALQAVRELVSLLRRYQEATT 705

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           P      + D            +   A LL    P  A +++  L   D
Sbjct: 706 P------DAD-------TFERGLATAAKLLAPVAPHAAEEMWAELGHDD 741


>gi|293363815|ref|ZP_06610555.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552620|gb|EFF41390.1| valine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 830

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 85/449 (18%), Positives = 169/449 (37%), Gaps = 60/449 (13%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
           TD +      +                +  +++  +  I  D FI           +  +
Sbjct: 257 TDGYVDPKFGSGLMKLSAHAEVDIDIIKKHKNLEIIETIDQDGFIN--APESIFHKQERF 314

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           +   +     K           E    + E    +   Y +  + PV+ +    +F ++ 
Sbjct: 315 EARKNIAKFLK-----------ENNLLEKEEQVVSSVGYSDRSNTPVEILVLPQWFVKME 363

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------- 221
            +   +L + +S        +R  +++    S + D ++SR+   WG +IP         
Sbjct: 364 NFGKIILEHLQSKNRVDFYPKRFVKILKHWMSNVHDWTISRQ-LWWGHRIPAWYKDDQIK 422

Query: 222 -----------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                       DP  ++  W  +  +     G+  N    K +++P D+ V G D++ F
Sbjct: 423 VQIESPGLGWVQDPD-VLDTWFSSGLSPFVFLGWPQNDKMLK-RYYPTDVLVTGSDLIFF 480

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               +Y     +    P    +        +G K+SKSL N IDP++VI E G DAL++F
Sbjct: 481 WIARMYMFGLDVMKEKPFKHLLIHGLIRDAQGRKMSKSLNNGIDPLDVINEYGADALKWF 540

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+   + G D  Y  + LK      L N + N +SR +  + +D +         T++D+
Sbjct: 541 LITNTSPGLDIKYSTEKLKSAWA--LCNKLWN-ISRFIEQLPQDQN------TKATDADK 591

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAST 446
            I +    +++ I + M+N       +Q+   +       Y +        K+NP +   
Sbjct: 592 WINNKLQVLIKNIDKAMKNYEFTLVGSQISKFIYTDLSGWYVE------FLKSNPSKK-- 643

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                +E+++   I +  F+  +  KIF 
Sbjct: 644 ---FAMELLKNTLIAINPFLSFITYKIFK 669



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 19/138 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA++ +I D + R+ +L G D  + +G D  G       
Sbjct: 31  NKKPFSILLPPPNVTGKLHLGHAFDTMIPDTIIRYKKLKGFDTFWISGMDHAGIATQAKV 90

Query: 63  QNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHH 103
           +     TK                  + ++ +  FR+    L ++ D      T +K  +
Sbjct: 91  EADLYETKGLTKHDLGREKFLDLVWDWKEKYATMFREQWAKLGLALDYENERFTLDKDAN 150

Query: 104 DTCRILWKKISDKGDIYK 121
           +    ++    +KG IYK
Sbjct: 151 EAVLKIFVDFYNKGLIYK 168


>gi|170044220|ref|XP_001849753.1| leucyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167867450|gb|EDS30833.1| leucyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 887

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 6/229 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E  K Y+     YP+   H+GH     I+D +ARF+RL+GL+VL   G D  G     A
Sbjct: 66  SEAPKRYVLAMFPYPSGNLHMGHVRVYTISDAMARFYRLNGLNVLHPMGWDAFGLPAENA 125

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    +  QN    R+  ++L  S+D      T +  ++   + L+  + + G  
Sbjct: 126 AIQRRIPADRWTKQNIGQMREQLEMLQFSFDWGREFATCDPEYYRWTQKLFLMLFEDGLA 185

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   DE    D++V    D          V+      +F + + +   LL  
Sbjct: 186 YQKEALVNWDPVDETVLADEQV---DDNGCSWRSGAKVEKKVLRQWFIKTTRFAKSLLDG 242

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYI 227
                        + +             L     D  + I   DP+++
Sbjct: 243 LSDPTLEDWKDIIKLQKHWIGDCDGYTFELKVVGEDRRVPIWSQDPKHL 291



 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 29/184 (15%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP++V+++ G D LR  ++ ++A      +               GI 
Sbjct: 588 WEKMSKSKLNGVDPLDVLKKHGCDTLRLIMLADVAPTSHRNWSDATF---------PGIL 638

Query: 360 NLVSRSVSMILKDYD------GMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHR 412
           N   R    +   +          P    F  +D  +    +        N + +  +  
Sbjct: 639 NWQKRIWMTMHDYHKLRSESALSPPDTPEFRAADLKLWDARNYFTAGATFNYRHSHQLSV 698

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            ++++  L +               +  P    T        I    ++L    P  A++
Sbjct: 699 GISKMQGLTNA-------------IRRAPPEVVTYGAHYERAIAAQIVMLAPMAPHFASE 745

Query: 473 IFDI 476
           ++  
Sbjct: 746 LWQR 749


>gi|159042613|ref|YP_001531407.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082998|sp|A8LJY0|SYL_DINSH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157910373|gb|ABV91806.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 869

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 85/240 (35%), Gaps = 7/240 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA 
Sbjct: 41  KQKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKASCGFSVLHPMGWDAFGMPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N    R     L +S D      T ++ ++   + ++    +KG +Y+
Sbjct: 101 ATGGHPKDWTYANIAEMRAQMKPLGLSIDWSREFATCDEAYYGQQQSMFLDFLEKGLVYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF++S + D LLS  +
Sbjct: 161 KNAVVNWDPVDMTVLANEQVIDGKG----WRSGAEVERRELTQWFFKISDFADDLLSALD 216

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
               +   +            GL + + +R      I +       +        +    
Sbjct: 217 GLENWPEKVRLMQANWIGKSRGL-EFAFARTDGGDPIPVYTTRPDTLMGASFVGISPGHP 275



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 115/387 (29%), Gaps = 84/387 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L Y E        I            
Sbjct: 434 WGLSRQRYWGCPIPVVHCDKCGVVPERKENLPIALPYDEDGRPIDFSIPGNP-------L 486

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK---FWPAD 259
                         G     +    M  ++D+   +   T          A+   +   D
Sbjct: 487 DRHPSWRDCACPACGAPARRETD-TMDTFVDSSWYFARFTAPRAETPTDPAEVGYWMNVD 545

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKG----- 300
            ++ G +    H +Y      A  L  +LP            + + +H      G     
Sbjct: 546 QYIGGVEHAILHLLYSRFFARAMHLCGHLPESAREPFDALFTQGMVTHAIYKTTGTDGRP 605

Query: 301 -----------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                                         K+SKS  NV+DP+ +I+  G D  R+F++ 
Sbjct: 606 VYHYPEEVETTEEGAVLKKTGAPVDIVPSAKMSKSKNNVVDPLAIIDAYGADTARWFVMS 665

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  +   G      A+ A      V R    + ++ +       A      ++ 
Sbjct: 666 DSPPERDVEWTASG------AEAAFKHLGRVWRLAEDLRRNAEEAATAGSAEEAR--ALA 717

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              +R + E+   ++    ++++A++    +             ++K+   RA       
Sbjct: 718 RASARAIAEVTAGIEGFAFNKSVAKLYEFTN------------TIQKSKAPRAEK----- 760

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
              ++ +A L+    P LA +++ +L 
Sbjct: 761 RAALKTMAQLMSPMTPHLAEEVWSMLG 787


>gi|322436941|ref|YP_004219153.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164668|gb|ADW70373.1| valyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 960

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 112/375 (29%), Gaps = 63/375 (16%)

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
            +  +  Q     +       +    R        +      +                 
Sbjct: 406 MYEKTYQQWMENIHDWCLSRQLWWGHRIPAWYCANRHITVSRTTPTACPTCASTDLTQET 465

Query: 226 YIMYVWIDALTNYLTTTGYLDNP-------------------DGSKAKFWPADLHVIGKD 266
            ++  W  +     T  G+                           A F+P DL V G D
Sbjct: 466 DVLDTWFSSGMLPFTVFGWPKVQGPGSSAQGSANLSPGPLSLSPDLASFYPTDLLVTGFD 525

Query: 267 ILRFHAIYWPAFLLSANLPLP---------------KKVFSHGFILH-KGEKISKSLGNV 310
           IL F               +P               ++V+ H  +     +K+SK+ GNV
Sbjct: 526 ILFFWVARMIMLGTHFMQEVPNADGTPRTLADSVPFREVYIHALVRDADRQKMSKTKGNV 585

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           IDPIE+I + G DA+R+ L  + + G D  +++   +       AN I N  +R + M +
Sbjct: 586 IDPIEIITKYGTDAVRFTLASQASPGTDIAFNEARTEG--YRAFANKIWN-AARFLFMNI 642

Query: 371 KDYDGMIPTPGAFTESD----------------------ESILSVCSRVLQEIRENMQNQ 408
           +       +    T  D                      + I    S   + + + +++ 
Sbjct: 643 ERAKEAGLSTTLVTNLDIPTTLGAPRPASGTWVGAPIETQWIFDRLSETSKTVDQALKDY 702

Query: 409 LIHRALAQVISLVS--EVDRYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               A   +         D Y +  K        N       L   V V      +L  F
Sbjct: 703 RFDEAANAIYQFFWGEFCDWYLELVKVRLDFSGENNAATEQSLSALVTVYEAALRMLSPF 762

Query: 466 VPKLANKIFDILFVA 480
           +P +  +I+ +L+ A
Sbjct: 763 MPFITEEIWHVLYAA 777



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGH  E    D+L R+HR+ G   L+  GTD  G       +   
Sbjct: 49  FTILLPPPNVTGVLHIGHMLEHTEMDILTRWHRMSGETALWVPGTDHAGIATQLMVEKQL 108

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 +  +      D    L  S D      T +        
Sbjct: 109 AAEGKTTRAELGREAFVARVWEWKQKYGSAITDQMRRLGDSVDWSREYFTMDDDLSHAVT 168

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+G Y   +    +   +D EV
Sbjct: 169 EAFVRLHEQGLIYRGAYIVNWDPVLQTAVSDLEV 202


>gi|255015281|ref|ZP_05287407.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256840399|ref|ZP_05545907.1| isoleucyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256737671|gb|EEU50997.1| isoleucyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 1140

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 128/395 (32%), Gaps = 22/395 (5%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADG 147
           FIRTT  R              +            +L+D        +     +++  DG
Sbjct: 477 FIRTTACRERMIELNNTINWKPQSTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDG 536

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V+   E     +    +               P +   E    +      +
Sbjct: 537 SEEKCIGSVVELFGEIEKSVKAGFMESNPYKD-------FAPGDYTKENYEKIDLHRPYV 589

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGK 265
                    G  +  +   ++ VW D+         Y           + +PAD    G 
Sbjct: 590 DDIILVSASGKPMKRETD-LIDVWFDSGAMPYAQIHYPFENLKEFDNRQIYPADFIAEGV 648

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F  ++    ++  ++     V +   +   G K+SK LGN +DP   IE+ G D
Sbjct: 649 DQTRGWFFTLHALGTMIFDSVAYKAVVSNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSD 708

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PG 381
            LR++++   +   +  +D DG+++                ++   +  +D   P     
Sbjct: 709 PLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFDYSDPDVEWS 768

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
              E D  ILS+ + +++++   ++     RA   +   V++   + Y    +       
Sbjct: 769 KRPEIDRWILSLLNSLVKDVDGYLEAYEPTRAGRAISDFVNDNLSNWYVRLNRRRFWGGG 828

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +   +        +  +A L+    P  A+++F
Sbjct: 829 MTEDKLSAYQTLYTCLETVAKLMAPIAPFYADQLF 863



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGHPTFVFYEGPPSANGMPGIHHVIARSIKDIFCRYKTMKGFLVNRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK  +                  + ++ + D+   +   +  ++   T + R+
Sbjct: 98  VEKALGITKEDIGKKISVAEYNAACRKDVMKFTKEWEDLTQKMGYWVDMENPYITYDNRY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L K++  KG +YKG     YS            N    Y+        AQ + +
Sbjct: 158 IETLWYLLKELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCTAQFHIL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E   F    +                P    +     V   +  L++       G
Sbjct: 218 DP-KPEMAQFGDPYFLAWT----------TTPWTLPSNTALCVGPNITYLAVQTYNPYTG 266

Query: 218 IKI 220
           I +
Sbjct: 267 IPM 269


>gi|21224742|ref|NP_630521.1| tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|4158182|emb|CAA22745.1| putative tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 506

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 127/387 (32%), Gaps = 40/387 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            +  ++      N   H+GH     + ADV +R  R+ G  VL+ +G D+H   +   A+
Sbjct: 6   RRFLVTATPPTTNGDVHVGHLSGPYLGADVFSRAQRMLGHTVLYASGGDDHQTYVVTTAE 65

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G+       + +R      ++  I  D F    +  +    R  +  +   G +    
Sbjct: 66  RLGLDPVELAARCNREIVGTLELAGIDIDAFTSP-DDAYRAEVREFFTGLHRAGRLKTRT 124

Query: 124 YSGWYSLRDEAYYND-------DEVYKGADGQYYNAQHNP-------------------V 157
           ++  Y  R   Y  +        E   G  G       +P                    
Sbjct: 125 WTFPYCGRTGRYLLEAFATGYCPECLVGTCGAICENCGHPNDVDSLLFPASTGAGPAATT 184

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           Q  E E     L  Y+++   +Y +    + P      V   +   L D  +S    DWG
Sbjct: 185 QPRETEILVLPLEEYREQFTEFYRARRATMRP-HVLRFVDEMLSRPLPDFPVSYPA-DWG 242

Query: 218 IKIPDD--PQYIMYVWIDA--LTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDIL 268
           I +  D     +  VW +      ++           +    W AD     +  +G D  
Sbjct: 243 IPVGIDGFDGQVFNVWAEMLPGLRHMAEAARARRGPATPPGVWAADSGFELVQFLGYDNT 302

Query: 269 RFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
            + A  +         L  P  + ++ F    G K S S  +++   +++ + G D +R+
Sbjct: 303 FYFAFAHLGLTFAHGGLTEPAAIVTNEFYHLDGAKFSTSRRHLVWARDLVGKYGADNVRF 362

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADL 354
            L  +    +   + +      V   L
Sbjct: 363 HLALDNPEHQPANFTEADFLDTVRTRL 389


>gi|126738687|ref|ZP_01754392.1| leucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126720486|gb|EBA17192.1| leucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 855

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  GKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKASTGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T ++ ++   + L+    +K  +Y
Sbjct: 90  MASGGHPKDWTYANIDTMVEQMKPLGLSLDWSRMFATCDEEYYGQQQALFLDFLEKDLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    +G         V+  E   +FF++S Y D+LLS  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQV----EGGRGWRSGALVERRELTQWFFKISDYSDELLSAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   +    E       GL+
Sbjct: 206 DELENWPAKVRLMQENWIGKSRGLQ 230



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 113/386 (29%), Gaps = 90/386 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   ++ G            L Y E        +            
Sbjct: 424 WGLSRQRYWGCPIPVVHCDDCGVVPEKKENLPIALPYDEDGKPIDFSVPGNP-------L 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                  +      G     +    M  ++D  + Y             +   A +W   
Sbjct: 477 DRHPSWRNCACPACGKPALRETD-TMDTFVD-SSWYFARFTAPRAETPTNMEDAAYWMNV 534

Query: 259 DLHVIGKDILRFHAIYWP----AFLLSANLP----------LPKKVFSHGFILHKG---- 300
           D ++ G +    H +Y      A  +  +LP            + + +H     +G    
Sbjct: 535 DQYIGGIEHAILHLLYSRFFSRAMQICGHLPESAKEPFDALFTQGMVTHAIYKSEGGNGR 594

Query: 301 ------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                                          K+SKS  NV+DP+ +I   G D  R+F++
Sbjct: 595 PVYHYPEEVDLRDGKAFLKEGGAEVKIIPSAKMSKSKNNVVDPLSIISSYGADTARWFVL 654

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
            +    +D  +   G +        N + NL  +  +M           P A  + DE +
Sbjct: 655 SDSPPERDVEWTASGAEAAYKH--LNRVWNLCDKIGAM----------DPDAKGQGDEDL 702

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           L    + ++++   +++   + A+A++    +             L K+           
Sbjct: 703 LREMHKAIRDVTLGVESFGFNAAIAKLYGFTN------------TLAKSKAG-----AAA 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDI 476
             + I  LA L+    P LA  I+  
Sbjct: 746 QKQAIMTLAQLMSPMTPHLAEDIWAH 771


>gi|325281107|ref|YP_004253649.1| Isoleucyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312916|gb|ADY33469.1| Isoleucyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 1143

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 90/268 (33%), Gaps = 8/268 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK--FWPADLHVIGKDIL--RFHAIY 274
           +     + ++ VW D+         Y         +   +PAD    G D     F  ++
Sbjct: 603 QKMYREKDLIDVWFDSGAMPYAQLHYPFEHREDIDQKLRFPADFIAEGVDQTRGWFFTLH 662

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A +   ++     + +   +  KG K+SK LGN +DP   I   G D LR++++    
Sbjct: 663 AIATMAFDSVAFKNIISNGLVLDAKGNKMSKRLGNAVDPFSTIATYGSDPLRWYMITNSQ 722

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILS 392
              +  +D  G+ +                ++   +  +             E D  ILS
Sbjct: 723 PWDNLKFDMAGIDEVKRKFFGTLYNTYGFFALYANVDHFRYAEAEVAIEERPEIDRWILS 782

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           + + +++E+ E  +     RA   +   V  +  + Y    +             +    
Sbjct: 783 LLNSLIKEVTEAYEKYEPTRAGRAIQDFVIENLSNWYVRLSRKRYWGGEYSQDKISAYQT 842

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
               +  +AIL     P    K+F  L 
Sbjct: 843 LYTCLETIAILSAPIAPFYMEKLFGDLN 870



 Score = 50.9 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I DV+ R+  L G  V    G D HG  +   
Sbjct: 38  EGHPSFVFYEGPPSANGMPGIHHVMARTIKDVICRYKTLQGFLVERKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            +     TK                      F  +     + M   +D+       T + 
Sbjct: 98  VEKKLGITKEAIGKTISVVEYNKECRADVMKFTKEWEDLTKQMGYWVDMKNPYI--TYDN 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           R+ +T   L KK+ +KG +YKG     YS       +  E+ +   
Sbjct: 156 RYIETLWYLLKKLYEKGFLYKGYTIQPYSPAAGTGLSTHELNQPGC 201


>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 924

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 80/460 (17%), Positives = 149/460 (32%), Gaps = 30/460 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV---TTKVFVDQNSRNFRDMADVLDI--SY 91
           F       +      DE G    +A    G+        + Q       +  +  I  SY
Sbjct: 333 FLVGQKYGLPVLCPVDERGYMTEEAPGFEGMFYEDANKAITQKLEEVGALLKLGFITHSY 392

Query: 92  DDFIRTTEK-RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               RT +      T +        + ++ +      +          + V    D    
Sbjct: 393 PHDWRTKQPTIFRATTQWFASIDKIRNELLQAIKETKWIPEWGEIRIHNMVRDRGDWCIS 452

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +             F     +  +      H   +      N         L     +
Sbjct: 453 RQRA-----WGVPIPVFYGENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFT 507

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
             +   GI        IM VW D+ +++                  PADL++ G D    
Sbjct: 508 HPSSPNGI--FTKETDIMDVWFDSGSSHQAVLVER------DDLMRPADLYLEGSDQYRG 559

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKSLGNV+ P +V+E+ G D LR +
Sbjct: 560 WFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQFGADILRLW 619

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTES 386
           +        D       LK+   +++   I N   R +   L D+D        G   E 
Sbjct: 620 VASVDYQA-DVRISDHILKQV--SEVYRKIRNTF-RFMLGNLFDFDPNQNAVPIGELGEV 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA 444
           D  +L+  ++++ ++++   +        ++     V     Y D  K     +    RA
Sbjct: 676 DRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRA 735

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              V  V  E +  LA L+   +P  A+++++ +    EN
Sbjct: 736 RRAVQTVLYETVVALAKLIAPILPHTADEVWEHIPNRREN 775



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  ++G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             +  +   N R     L +   +D+   T +  +     
Sbjct: 105 LAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 214


>gi|6323414|ref|NP_013486.1| Nam2p [Saccharomyces cerevisiae S288c]
 gi|135144|sp|P11325|SYLM_YEAST RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|4021|emb|CAA28791.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|172008|gb|AAA34805.1| leucyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|609429|gb|AAB67277.1| Nam2p: mitochondrial leucyl-tRNA synthetase [Saccharomyces
           cerevisiae]
 gi|285813787|tpg|DAA09683.1| TPA: Nam2p [Saccharomyces cerevisiae S288c]
          Length = 894

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI     YP+   HIGH    +I+D L RF++  G +V+   G D  G     AA    +
Sbjct: 50  YILCQFPYPSGALHIGHLRVYVISDSLNRFYKQKGYNVIHPMGWDAFGLPAENAAIERSI 109

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++   N    +     +  +  +D  I T +  ++   + ++ K+ + G  Y+    
Sbjct: 110 NPAIWTRDNIAKMKQQMQSMLANFDWDREITTCDPEYYKFTQWIFLKLFENGLAYRKEAE 169

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V               V+  + + +F  ++ +  KL  +     +
Sbjct: 170 INWDPVDMTVLANEQVDAQ---GRSWRSGAIVEKKQLKQWFLGITKFAPKLKKHLNQLKD 226

Query: 186 FILPIERRNEVISFVKSG 203
           +   +++  +       G
Sbjct: 227 WPSNVKQMQKNWIGESVG 244



 Score = 54.0 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 74/181 (40%), Gaps = 19/181 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N  DP E I   G DA R  ++ +        +D+  +   +R    + +  
Sbjct: 645 EKMSKSKYNGADPNECILRHGPDATRAHILFQSPIADALNWDESKIVGIERWLQKVLHLT 704

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
            N++S    + +        TP    +++    +   R L+ I E+ + N  ++  ++  
Sbjct: 705 KNILSLEKDLAISK---DYKTPTDLNDAEVKFHNDFQRFLKSITESFEVNLSLNTVISDY 761

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + +           LKK           + V+ +++L  ++   VP ++ +  +++
Sbjct: 762 MKLTNIL-----ESA---LKKGEVR-----NEMIVQNLQKLVTVIYPAVPSISEEAAEMI 808

Query: 478 F 478
            
Sbjct: 809 N 809


>gi|307354269|ref|YP_003895320.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157502|gb|ADN36882.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 1054

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 80/417 (19%), Positives = 142/417 (34%), Gaps = 71/417 (17%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E+       +      P+     E +F  +   + ++L           P    +     
Sbjct: 383 EMKITHRYGHCWRCKTPIISRATEQWFIAIPRIKQQMLDEI--AKVKWYPDWAGSARFHD 440

Query: 200 VKSGLKDLSLSRKTFDWGIKIP---------------------------DDP-------- 224
             +  +D  +SR+   WGI IP                           +DP        
Sbjct: 441 FVADSRDWCISRQR-YWGIPIPVWKCDSCGKQEVFGTIAELNERAGSHLEDPHRPYVDEI 499

Query: 225 -------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                        + I  VW D+      T GY    +    K WPAD    G+D     
Sbjct: 500 TFGCSCGGTMKRVEDIFDVWFDSAMASWATIGYPREKER-FEKLWPADFITEGQDQTRGW 558

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    + +     P  K +     +   G K+SKSLGNV+ P E+IE VGVD LR ++
Sbjct: 559 FYSQLGASTIAFDRAPYKKVMMHGFSLDSDGRKMSKSLGNVVTPEEIIERVGVDVLRMYI 618

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDY------------DGM 376
           +   A   D  ++ +G+K    A   N + N+    +  MIL  +            D +
Sbjct: 619 LSASAPWDDLKFNWEGVKTTNRA--MNILWNVYRFPLPYMILDSFAPETGESGVWDADYI 676

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW 434
                     D  I+S  + +  ++  +++N  +H+A   +I+ +       Y    +  
Sbjct: 677 RKNIKEMPVEDRWIISRINTLCSQVSVDIENCELHKASRNIINCILEDISRWYVQLIRQR 736

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              +               V+R+L  ++    P ++  I+  L    + R    LD 
Sbjct: 737 MWLEEEAVEKIQAYETMYYVMRRLIEVIAPMAPYISESIYQNLRTNSDPRSVHMLDW 793



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 19/178 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              +      Y     H+G A+  I+ D + RF R++GL+V+   G D HG  I    +N
Sbjct: 38  PDYFFVDGPPYTTGHIHLGTAWNKILKDTILRFRRMNGLNVIDRAGYDMHGLPIEVRVEN 97

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 K F   +     +    L +   +D+  +T    + ++
Sbjct: 98  ELGFKSKKDIESFGISNFIEKCKNFAVVHKDIMSEQFKNLGVWMDFDNPYQTISPDYVES 157

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              + K+  +K  + KG     +  R E    D EV    +         PV+  E E
Sbjct: 158 AWWVLKRAEEKKLLEKGFRVVNWCPRCETAIADSEVEYWDETDPSIFVKFPVRGKESE 215


>gi|301311233|ref|ZP_07217161.1| isoleucine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300830807|gb|EFK61449.1| isoleucine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 1140

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 128/395 (32%), Gaps = 22/395 (5%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADG 147
           FIRTT  R              +            +L+D        +     +++  DG
Sbjct: 477 FIRTTACRERMIELNNTINWKPQSTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDG 536

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V+   E     +    +               P +   E    +      +
Sbjct: 537 SEEKCIGSVVELFGEIEKSVKAGFMESNPYKD-------FAPGDYTKENYEKIDLHRPYV 589

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGK 265
                    G  +  +   ++ VW D+         Y           + +PAD    G 
Sbjct: 590 DDIILVSASGKPMKRETD-LIDVWFDSGAMPYAQIHYPFENLKEFDNRQIYPADFIAEGV 648

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F  ++    ++  ++     V +   +   G K+SK LGN +DP   IE+ G D
Sbjct: 649 DQTRGWFFTLHALGTMIFDSVAYKAVVSNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSD 708

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PG 381
            LR++++   +   +  +D DG+++                ++   +  +D   P     
Sbjct: 709 PLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFDYSDPDVEWS 768

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
              E D  ILS+ + +++++   ++     RA   +   V++   + Y    +       
Sbjct: 769 KRPEIDRWILSLLNSLVKDVDGYLEAYEPTRAGRAISDFVNDNLSNWYVRLNRRRFWGGG 828

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +   +        +  +A L+    P  A+++F
Sbjct: 829 MTEDKLSAYQTLYTCLETVAKLMAPIAPFYADQLF 863



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGHPTFVFYEGPPSANGMPGIHHVIARSIKDIFCRYKTMKGFLVNRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK  +                  + ++ + D+   +   +  ++   T + R+
Sbjct: 98  VEKALGITKEDIGKKISVAEYNAACRKDVMKFTKEWEDLTQKMGYWVDMENPYITYDNRY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L K++  KG +YKG     YS            N    Y+        AQ + +
Sbjct: 158 IETLWYLLKELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCTAQFHIL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E   F    +                P    +     V   +  L++       G
Sbjct: 218 DP-KPEMAQFGDPYFLAWT----------TTPWTLPSNTALCVGPNITYLAVQTYNPYTG 266

Query: 218 IKI 220
           I +
Sbjct: 267 IPM 269


>gi|294788125|ref|ZP_06753369.1| leucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294484418|gb|EFG32101.1| leucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 875

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y  +   YP+ + H+GH     I DV +RF +L G +VL   G D  G     A
Sbjct: 30  TSKPKFYCLSMFPYPSGKLHMGHVRNYTIGDVRSRFKKLQGYNVLQPMGWDAFGMPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +  QN    +     L  + D    + T    ++   ++L+ ++  KG I
Sbjct: 90  AIDRGVAPAAWTYQNIDYMKQQLKSLGFALDWERELATCRPEYYRWEQMLFTRLFKKGII 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D     +++V  G            V+  E   Y++R++ Y ++LL+ 
Sbjct: 150 YRKLGTVNWDPVDNTVLANEQVVDG----RGWRSGALVEKREIPMYYYRITDYAEQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +           +   I   +
Sbjct: 206 LDDLDWPEQVKTMQRNWIGKSR 227



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 24/181 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGI 358
           EK+SKS  N +DP E+I+  G D  R F++      +   +   G+    R  A L   +
Sbjct: 632 EKMSKSKNNGVDPQEIIDAYGADTARLFMMFASPPEQSLEWSDAGVAGAHRFLARLWRTV 691

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ-LIHRALAQV 417
              V    + ++K         G  + S + +       + ++ ++   +   + A+A V
Sbjct: 692 YEFVQNGGANVVKFAG------GELSGSLKDLRFKLHSTIAKVTDDYDRRQQFNTAIAAV 745

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + L   +++Y              D++  +   V  EVI  + ILL   VP +   ++  
Sbjct: 746 MEL---LNQY-----------DKTDKSGEIGQAVAREVIESVVILLSPIVPHITETLWSE 791

Query: 477 L 477
           L
Sbjct: 792 L 792


>gi|190405424|gb|EDV08691.1| LeuRS [Saccharomyces cerevisiae RM11-1a]
 gi|256269121|gb|EEU04456.1| Nam2p [Saccharomyces cerevisiae JAY291]
 gi|259148361|emb|CAY81608.1| Nam2p [Saccharomyces cerevisiae EC1118]
          Length = 894

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI     YP+   HIGH    +I+D L RF++  G +V+   G D  G     AA    +
Sbjct: 50  YILCQFPYPSGALHIGHLRVYVISDSLNRFYKQKGYNVIHPMGWDAFGLPAENAAIERSI 109

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++   N    +     +  +  +D  I T +  ++   + ++ K+ + G  Y+    
Sbjct: 110 NPAIWTRDNIAKMKQQMQSMLANFDWDREITTCDPEYYKFTQWIFLKLFENGLAYRKEAE 169

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V               V+  + + +F  ++ +  KL  +     +
Sbjct: 170 INWDPVDMTVLANEQVDAQ---GRSWRSGAIVEKKQLKQWFLGITKFAPKLKKHLNQLKD 226

Query: 186 FILPIERRNEVISFVKSG 203
           +   +++  +       G
Sbjct: 227 WPSNVKQMQKNWIGESVG 244



 Score = 54.0 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 74/181 (40%), Gaps = 19/181 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N  DP E I   G DA R  ++ +        +D+  +   +R    + +  
Sbjct: 645 EKMSKSKYNGADPNECILRHGPDATRAHILFQSPIADALNWDESKIVGIERWLQKVLHLT 704

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQV 417
            N++S    + +        TP    +++    +   R L+ I E+ + N  ++  ++  
Sbjct: 705 KNILSLEKDLAISK---DYKTPTDLNDAEVKFHNDFQRFLKSITESFEVNLSLNTVISDY 761

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + +           LKK           + V+ +++L  ++   VP ++ +  +++
Sbjct: 762 MKLTNIL-----ESA---LKKGEVR-----NEMIVQNLQKLVTVIYPAVPSISEEAAEMI 808

Query: 478 F 478
            
Sbjct: 809 N 809


>gi|298377524|ref|ZP_06987476.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265543|gb|EFI07204.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 1140

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 128/395 (32%), Gaps = 22/395 (5%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADG 147
           FIRTT  R              +            +L+D        +     +++  DG
Sbjct: 477 FIRTTACRERMIELNNTINWKPQSTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDG 536

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V+   E     +    +               P +   E    +      +
Sbjct: 537 SEEKCIGSVVELFGEIEKSVKAGFMESNPYKD-------FAPGDYTKENYEKIDLHRPYV 589

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGK 265
                    G  +  +   ++ VW D+         Y           + +PAD    G 
Sbjct: 590 DDIILVSASGKPMKRETD-LIDVWFDSGAMPYAQIHYPFENLEEFDNRQIYPADFIAEGV 648

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F  ++    ++  ++     V +   +   G K+SK LGN +DP   IE+ G D
Sbjct: 649 DQTRGWFFTLHALGTMIFDSVAYKAVVSNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSD 708

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PG 381
            LR++++   +   +  +D DG+++                ++   +  +D   P     
Sbjct: 709 PLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFDYSDPDVEWS 768

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
              E D  ILS+ + +++++   ++     RA   +   V++   + Y    +       
Sbjct: 769 KRPEIDRWILSLLNSLVKDVDGYLEAYEPTRAGRAISDFVNDNLSNWYVRLNRRRFWGGG 828

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +   +        +  +A L+    P  A+++F
Sbjct: 829 MTEDKLSAYQTLYTCLETVAKLMAPIAPFYADQLF 863



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGHPTFVFYEGPPSANGMPGIHHVIARSIKDIFCRYKTMKGFLVNRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK  +                  + ++ + D+   +   +  ++   T + R+
Sbjct: 98  VEKALGITKEDIGKKISVAEYNAACRKDVMKFTKEWEDLTQKMGYWVDMENPYITYDNRY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L K++  KG +YKG     YS            N    Y+        AQ + +
Sbjct: 158 IETLWYLLKELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCTAQFHIL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E   F    +                P    +     V   +  L++       G
Sbjct: 218 DP-KPEMAQFGDPYFLAWT----------TTPWTLPSNTALCVGPNITYLAVQTYNPYTG 266

Query: 218 IKI 220
           I +
Sbjct: 267 IPM 269


>gi|253795688|ref|YP_003038784.1| putative methionyl-tRNA synthetase [Candidatus Hodgkinia cicadicola
           Dsem]
 gi|253739996|gb|ACT34331.1| putative methionyl-tRNA synthetase [Candidatus Hodgkinia cicadicola
           Dsem]
          Length = 494

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 119/510 (23%), Positives = 195/510 (38%), Gaps = 42/510 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  R++  + TA+AY NA  H GHA+E+  A VL+ +      D     GTD+HG K+  
Sbjct: 8   VTTRKRYTVCTALAYTNACVHAGHAFELAAAAVLSAY-IAKWHDTRLVCGTDDHGLKLKA 66

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI- 119
           +A    V        N+     +A  L     D++ T   RH        +K++      
Sbjct: 67  SADWLKVHPVKLAVVNANKALALASRLRAPVSDWLSTLHVRHTRRAESCLRKVTRLKKWV 126

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  Y GWYS   +AY  DD+V    +G Y      PV+W +E G F   +A +   L+ 
Sbjct: 127 YELSYCGWYSPYADAYCGDDDVSLSRNGMYMCEGQ-PVEWAQERGVFLNYNALKP-KLAS 184

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNY 238
                  + P   +  V+S V          +    +G+K       + ++VW +AL  Y
Sbjct: 185 VYRADVILTPNVSKRAVVSAVMKAQNVCFSRQPAAGYGLKFKTKEAKLSLWVWFEALMAY 244

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
               G                +HV+G+D+  FH  Y+ A  L  N  LPK V  H  +  
Sbjct: 245 AGAGGVNK-------------IHVVGRDVFWFHITYYVALALCLNQKLPKAVLCHAHVAE 291

Query: 299 KG-EKISKSLGN-VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
            G  K+SKSLG+ ++   +  + +            +A   DG         R  A +A 
Sbjct: 292 NGRRKLSKSLGDELVSLPQTWDAIKHALCSKPNKANVAVDADG-------ASRFRAQIAK 344

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +GNLV R   +            G  + +D   +       + ++ +       + +A 
Sbjct: 345 ALGNLVKRLTKLTA----TRGAKAGKLSANDWIHIMYAKHAPKVVKHHAMRLRFGQVVAF 400

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVL--YVTVEVIRQLAILLQAFVPKLANKIF 474
           +   +++ +      KPW        RA       V +         L+ F+   A+ I 
Sbjct: 401 LTGRIAKTNASLSKLKPWL-------RADAAHKLAVWIYTTAVFTKWLEPFLGHSASSII 453

Query: 475 DILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           D L  AD    F   D++  P     K  +
Sbjct: 454 DALLTAD--HTFTPFDRKPPPAISRQKPEE 481


>gi|288925765|ref|ZP_06419696.1| isoleucine--tRNA ligase [Prevotella buccae D17]
 gi|288337420|gb|EFC75775.1| isoleucine--tRNA ligase [Prevotella buccae D17]
          Length = 1129

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 120/325 (36%), Gaps = 31/325 (9%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    +      +       + G  +  +   ++ VW D+ +       Y  
Sbjct: 548 FVPGDYSQENYDKIDLHRPYVDNIVLVNESGKPMYRETD-LIDVWFDSGSMPYAQLHYPF 606

Query: 247 NPDGSKA--------------------KFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
             +                        KF+PAD    G D     F  ++  A ++  ++
Sbjct: 607 EGEMKHGTEADRQEMVESRYNGMPIPPKFYPADFINEGVDQTRGWFFTLHAIATMVFDSV 666

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                + +   +  KG K+SK +GNV DP E+I + G D +R++++       +  +D +
Sbjct: 667 AFKNVISTGLVLDAKGNKMSKHVGNVTDPFEMIGKYGADPVRFYMMTNSEPWDNLKFDPN 726

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIR 402
           G+ +                ++   + ++D            E D  ILS  S +++E+ 
Sbjct: 727 GVDEVRRKFFGTLYNTYSFFALYANVDNFDPEASQVDLAKRPEIDRWILSCLSTLVKEVE 786

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             ++N    RA   + + V++   + Y   + ++ W   K   +   +        +  +
Sbjct: 787 TELENFDPTRAGRLIDNFVNDDLSNWYVRLNRKRFW--GKEMSEDKLSAYQTLYTCLMTV 844

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
           + L+  F P  A++++  L    E+
Sbjct: 845 SKLIAPFAPFFADQLYHDLGGKMES 869


>gi|119716116|ref|YP_923081.1| leucyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|189030304|sp|A1SHV9|SYL_NOCSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119536777|gb|ABL81394.1| leucyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 848

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 6/186 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y  T   YP+   H+GHA    + DV+AR+    G +VL   G D  G     AA 
Sbjct: 59  REKKYALTMFPYPSGDLHMGHAEVTALHDVVARYWWQRGYEVLNPMGWDSFGLPAENAAI 118

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N     +      +S+D    + T++  ++   + L+ K  ++G  Y+
Sbjct: 119 RNDEHPATYTYANIETQYESFKRYAVSFDWSRRLHTSDPEYYRWTQWLFLKFRERGLAYR 178

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V   E   ++F+++ Y  +LL   +
Sbjct: 179 KSSPVNWCPNDQTVLANEQVVDG----RCERCGAEVTKRELTQWYFKITDYAQELLDRLD 234

Query: 182 SHPEFI 187
                 
Sbjct: 235 DLEPTW 240



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 108/283 (38%), Gaps = 36/283 (12%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSAN 283
                Y +        D  KAK W PAD++V G +    H +Y   F        +L  +
Sbjct: 537 WYFLRYCSPDYTEGPFDVEKAKAWMPADIYVGGVEHAVLHLLYARFFTKVLRDMGMLEVD 596

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P   ++ + G ++++G+K+SKSLGN +   + + E GVDA+R  LV       D   D 
Sbjct: 597 EPFAAQL-NQGIVINQGKKMSKSLGNGVSLGDQLAEFGVDAVRVTLVFAGPPEDDI--DW 653

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +          G    + R+  +     D            D ++  V +R + +  E
Sbjct: 654 ADVS-------PAGALRFLQRAWRLSG---DVTSEAGTPAAGGDVALRRVTARTVHDAAE 703

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +++   +  +A+V+ LV+   +  D   P                   E    +AILL 
Sbjct: 704 LIESYRFNVMVARVMELVNATRKAID-GAP-----------GPADPAVREATETVAILLS 751

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
              P +A ++++ L    E    +     + P  ++ +    +
Sbjct: 752 LVAPYVAEEMWERLG--HEPTVARVGWPEVDPALLVEEQVTAV 792


>gi|242799487|ref|XP_002483390.1| valyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218716735|gb|EED16156.1| valyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1066

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 79/493 (16%), Positives = 141/493 (28%), Gaps = 72/493 (14%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           + G    K              Q+   F  + +      D+    +  R  D    + +K
Sbjct: 386 DFGTGAVKLTPAHDFNDYARGKQHGLEFVSILNDDGTLKDNCGAFSGMRRFDARYAVVEK 445

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----NPVQWMEE----- 162
           + + G   K   +     R E   +  E                     V+  E      
Sbjct: 446 LKEAGLYVKWENNPMVIPRCEKSKDIIEPVLKPQWWMKMDDMARAAMEAVEKKEITISPA 505

Query: 163 --EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--- 217
             E  FF             +       P             G  +L +S ++ +     
Sbjct: 506 SAEKNFFHWMRNIQDWCISRQLWWGHQAPAWLVQIEGQVADDGDSNLWVSGRSEEEAQAK 565

Query: 218 ---------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                      +  D   ++  W  +      T G+ +       K +P      G DIL
Sbjct: 566 AAAKFPGQKFTLKRDED-VLDTWFSSGLWPFATLGWPNTESHDYQKLFPTSTLETGWDIL 624

Query: 269 RFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI-------- 317
            F    +   +  L+  +P  K+V+ H  I   +G K+SKSLGNVIDP++V         
Sbjct: 625 FFWVARMIMLSLKLTGKVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPLDVQKGITLDAL 683

Query: 318 -----------------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
                                         E G DALR  LV     G D  +D + +  
Sbjct: 684 HEKLKQGNLAEKEIGVATKYQKKAFPKGIPECGADALRMALVSYTTGGGDIAFDVNVI-- 741

Query: 349 RVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                  N I       +  +  D+         G  +  +  ILS  ++  +EI   ++
Sbjct: 742 FGYRRFCNKIYQATKFVLGKLGSDFVPSAKPVKTGRESLPERWILSKFNKAAKEINNAIE 801

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            +    + +     +     D Y +  K         +   +        +    +LL  
Sbjct: 802 TREFSISASTAYQYIYSQLCDVYIENSKSLLQSDAPAEVQESAKQTLYTALEGSLLLLHP 861

Query: 465 FVPKLANKIFDIL 477
            +P +   ++  L
Sbjct: 862 IMPYITEDLWQRL 874



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 19/139 (13%)

Query: 11  TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT-- 68
                     H+GHA  + + D + R++R+ G   ++  GTD  G       +       
Sbjct: 145 CPPPNVTGALHMGHALMVALQDTMTRYYRMKGKTTVWVPGTDHAGISTQSVVEKMLWKEK 204

Query: 69  ---------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                          T+ + D+   +       +  S D      T            + 
Sbjct: 205 KQTRHDLGRPDFLKLTQDWKDRYQGSILTSLKAMAASLDWSREAFTMNPNFSAAVTETFC 264

Query: 112 KISDKGDIYKGCYSGWYSL 130
           ++ ++G IY+      +  
Sbjct: 265 RLHEEGTIYRANRLVNWCC 283


>gi|261405570|ref|YP_003241811.1| leucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282033|gb|ACX64004.1| leucyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 813

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    +
Sbjct: 36  SSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQ 95

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F  QN   FR     L  SY  D  I TT+  ++   + ++ ++  +G 
Sbjct: 96  YAMDTGKHPREFTVQNIDTFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYKRGL 155

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  R++ Y D+LL 
Sbjct: 156 AYVAEVPVNWCEALGTVLANEEVIDGKS----ERGGHPVVRKPMRQWILRITEYADRLLE 211

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + +   I
Sbjct: 212 DLDELDWSESLKDMQRNWI 230



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 41/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+    + +     K K W P DL++ G +    H +Y   +    
Sbjct: 499 PQWAGSCW--YYLRYIDPDNHDELCSKEKQKEWLPVDLYIGGVEHAVLHLLYARFWHKVL 556

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K V     + +  EK+SKS GNVI+P +++ E G D LR + +    
Sbjct: 557 YDLGVVDTKEPFQKLVNQGMILGNNNEKMSKSRGNVINPDDIVNEYGADTLRVYEMFMGP 616

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 ++ +G++         G    +SR   + + D   + P       +DE      
Sbjct: 617 LEATKPWNTNGVE---------GTHRFLSRVWRLFIGDDGQLNPKIVDGEGTDE-FKRTL 666

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ ++ ++   + A++Q++  ++E  +      P +                   
Sbjct: 667 HKTIKKVTDDFEHLRFNTAISQLMIFINEGYK--SEVLPRK------------------A 706

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +     LL    P LA +++  L   +
Sbjct: 707 MENFVQLLSPLAPHLAEELWSRLGYTE 733


>gi|110638824|ref|YP_679033.1| valyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281505|gb|ABG59691.1| valyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 880

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 89/535 (16%), Positives = 175/535 (32%), Gaps = 86/535 (16%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFT------TGTDEHGQKIAKAAQNAGVTTKVFV 73
           E I+ D          R+  L G  V+           ++    +        VT    V
Sbjct: 221 ETILGDTAVCIHPKDERWKHLKGKKVIVPLINKEIPIIEDEYVDLEFGTGCLKVTPAHDV 280

Query: 74  DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           +      +   +V+DI  DD   T  ++           +    D +K        L ++
Sbjct: 281 NDYQLGQKHGLEVIDIMNDD--GTFNEKAQ---------LYVGLDRFKVRKQLSAELEEK 329

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY--ESHPEFILPIE 191
            +    +      G Y    +  V+      +F  + ++ DK         + E  L   
Sbjct: 330 GFLTKTDNITNNVG-YSERTNAVVEPRLSLQWFVNMRSFMDKHPEVLSSVMNDEIKLHPA 388

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------ 221
           +           +KD  +SR+   WG +IP                              
Sbjct: 389 KFKNTYKHWIDNIKDWCISRQ-LWWGQRIPAWYLSDGQYIVALNETEALAKAKALTSNAA 447

Query: 222 ------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--A 272
                    + ++  W  +    ++      +P+    K++ P D  V   +IL F    
Sbjct: 448 LTLADLKQDEDVLDTWFSSWLWPISVFDGFKDPNNEDIKYYYPTDDLVTAPEILFFWVAR 507

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +    +      P      +      +G K+SKSLGN  DP+++I + G D +R+ ++  
Sbjct: 508 MIMAGYAFRGEKPFSNVYLTGIVRDKQGRKMSKSLGNSPDPLDLITKYGADGVRFGMLLS 567

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              G D  +D    ++  N        N +  +  +I K ++     P     S E + +
Sbjct: 568 SPAGNDLLFDDKYCEQGRN------FTNKLWNAFRLI-KGWEIDKSLPYVNAASVEWLNA 620

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
             +  L EI ++     +  AL  V  LV +     Y +  KP   +   P  A T    
Sbjct: 621 RINASLVEIEDHFSKYRLSDALMSVYKLVWDDLCAWYLEMIKP---EFGKPIDAKTYEET 677

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
              +  ++  ++  F+P +  +++       E +   + D  +   +   K + P
Sbjct: 678 LA-IFEEILKIVHPFMPFITEELWH------EIKERSATDCVIVAAWPTVKPYSP 725



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GH     I DVL R  R++G +  +  GTD          
Sbjct: 34  NKKPFTIVIPPPNVTGVLHMGHMLNNTIQDVLIRKARMEGKESCWVPGTDHASIATEAKV 93

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + D+      +    L  S  +D    T E    D
Sbjct: 94  VALLREQGIKKSDLSRDKFLEHAWAWKDKYGGIILEQLKKLGASCDWDRTRFTMEDNLSD 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++ K+   G IY+G     +    +   +D+EV  
Sbjct: 154 AVIEVFNKLYADGMIYRGFRMVNWDPEGKTALSDEEVIH 192


>gi|300024794|ref|YP_003757405.1| leucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526615|gb|ADJ25084.1| leucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 874

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 77/208 (37%), Gaps = 6/208 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV ARF R  G +VL   G D  G     AA
Sbjct: 32  KQAKCYVLEMFPYPSGRIHMGHVRNYAMGDVFARFKRAKGFNVLHPMGWDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    +   N    R     + +S D    I T    ++   + L+  +  KG  Y
Sbjct: 92  MERKVHPGTWTYANIDTMRGQLKSMGLSLDWSREIATCSPNYYRHQQKLFLDLLKKGLAY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF+++ Y ++LLS  
Sbjct: 152 RKSSKVNWDPVDHTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDYAEELLSDL 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS 208
           ++   +   +            G+    
Sbjct: 208 DTLNNWPEKVRLMQANWIGRSEGMLIRW 235



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 131/407 (32%), Gaps = 87/407 (21%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   E+ G            L    +  +   P+ER       VK 
Sbjct: 434 WGISRQRYWGCPIPVIHCEKCGVVGVPEQDLPVTLPEDATFDKPGNPLERHPTW-KHVKC 492

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFW-PAD 259
                  +R+T              M  ++D+   ++  T         K  A +W P D
Sbjct: 493 PTCGGDATRET------------DTMDTFVDSSWYFVRFTAPEAKTPVDKDAAHYWLPVD 540

Query: 260 LHVIGKDILRFHAIY----WPAFLLSANLPLPKKV-------FSHGFILHKG-------- 300
            ++ G +    H +Y      A   + +L     +       F+ G + H+         
Sbjct: 541 QYIGGIEHAILHLLYSRFFARAMCDTGHLKFASNIREPFSALFTQGMVTHETYKSQDGFW 600

Query: 301 -------------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                          EK+SKS  N++DP ++I   G D  R+F+
Sbjct: 601 LLPNDVRLEGEGASRQAIEIATGRLAAIGAIEKMSKSKKNLVDPDDIIAHYGADCARWFM 660

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-PGAFTESDE 388
           + +    +D  + + G+        A+     V R +  IL+ Y       P  F     
Sbjct: 661 LSDSPPERDVIWTEAGVAG------ASRFIQRVWRLMDDILEAYPQKPDKRPDTFGPDAL 714

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVL 448
            +     R L  + + ++    + A+A +    + +           L K+ P  A    
Sbjct: 715 ELRKAGHRALDNVGKAIEALRFNVAVANIHEFSNVLQT--------VLTKSEPGLA---- 762

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
           +   E    LA ++   +P LA + +  L       N+ + +++  L
Sbjct: 763 WTAHEAGALLASMIGPMMPHLAEECWARLGYNTLLANQPWPAVEPDL 809


>gi|294139600|ref|YP_003555578.1| valyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326069|dbj|BAJ00800.1| valyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 971

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 133/416 (31%), Gaps = 103/416 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   ++     +P +  N + +     + D  +SR+   W
Sbjct: 374 IEPLLTDQWYVSVAPMAKTAMEAVDNGDIKFVPQQYEN-MYNSWMRDINDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+  
Sbjct: 432 GHRIPAWYDEAGKVYVGRDEAEVRAKHKLDDSVVLRQDNDVLDTWFSSALWTFSTLGWPK 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NTEELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 VGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPKLAAKIEKSTRKEFADGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGM- 376
            DALR+ L    + G+D  +D   L         N I N  SR V M  +    D D   
Sbjct: 611 TDALRFTLASMASTGRDISWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQSEDQDSNV 667

Query: 377 --------------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
                          P     + +D  I+ + ++ ++   E+M++     A   +     
Sbjct: 668 AGEPLDCGQILTDGKPGEMELSLADRWIIGLFNQTVKAFDEHMESYRFDLAANTIYEFTW 727

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP     T   +  T  +  V V+ Q+  L+   +P +   I+  
Sbjct: 728 NQFCDWYLELTKPVMQSGTEAQKRGT-RHTLVTVLEQMQRLMHPMMPYITETIWKR 782



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +++          L   + +D    T ++  
Sbjct: 90  VERKLEAEEGKTRHDLGRDKFIDKIWDWKEESGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +        +D EV              P+
Sbjct: 150 SEAVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|55379275|ref|YP_137125.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579285|sp|Q5UZ84|SYI_HALMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55232000|gb|AAV47419.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 1074

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 115/297 (38%), Gaps = 12/297 (4%)

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
            ER ++ I      L   ++   T             +  VW+D+      T  Y +  +
Sbjct: 492 AERVDQDIDPENVDLHKGTVDDLTITEDSTTYTRVGDVFDVWLDSSVATWGTVNYPEQTE 551

Query: 250 GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
               + WPADL +   D     F +    +   +  +P  + +      +  G  +SKS 
Sbjct: 552 -DFEELWPADLIMEAHDQTRGWFWSQLGMSTAATGEIPYKQVLMHGYANMPDGRGMSKSK 610

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV- 366
           G +IDP EVIE+ G D +R FL+   A G+D  +  +   +       N + N+    + 
Sbjct: 611 GVLIDPHEVIEKHGRDPMRLFLLSVTAQGEDMNFSWEETAEMQRR--LNILWNVARFPLP 668

Query: 367 SMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            M   D+D    T           DE +LS    V + + ++M +    +A+ +++  V 
Sbjct: 669 YMRADDFDPEETTVEDLRDDLELVDEWVLSRLQSVTEAMTDSMDDFENDKAVDELLEFVV 728

Query: 423 E-VDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           E V R Y    +    ++ +             V+  +A L   F P +A +++  L
Sbjct: 729 EDVSRFYIQVVRERMWEEEDSASKQAAYATLYRVLESVAALFAPFTPFVAEQVYGAL 785



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 19/189 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  +      Y +   H+G  +   + D   R+ R+ G +V    G D HG  I    
Sbjct: 39  DGEDYFFVDGPPYTSGAAHMGTTWNKTLKDCYIRYLRMQGYNVTDRPGYDMHGLPIETKV 98

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F ++     +       +   +DD  +T    + 
Sbjct: 99  EERLDFENKKDIEQFGEENFIEECKDFAEEQLEGLQTDFQDFGVWMDWDDPYKTVNPEYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +     +++  ++  + +G  S     R E    ++EV     G+       P+   +  
Sbjct: 159 EAAWWGFQQAHERDLVEQGQRSINQCPRCETGIANNEVEYHDVGKPSIYVKFPLAEQDGS 218

Query: 164 GYFFRLSAY 172
              +  + +
Sbjct: 219 LVIWTTTPW 227


>gi|45358147|ref|NP_987704.1| valyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74555235|sp|Q6LZP0|SYV_METMP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|44920904|emb|CAF30140.1| Valyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 886

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 77/468 (16%), Positives = 157/468 (33%), Gaps = 32/468 (6%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
           E G  +         T   +V+++    +   +      +   +   K+  D  + +   
Sbjct: 262 EFGTGVVMVCTFGDKTDVTWVNRHKLEVKKAINEKGQLTEICGKYAGKKSDDARKEIISD 321

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLSA 171
           +  +  + K                  E+  G        +    V+    E  +     
Sbjct: 322 LISENYMIKQEPLEQNVGSCWRCKTPIEIIVGDQWFVNVTKLLTEVENAANEISWVPEHM 381

Query: 172 YQDKLLSYYESHPEFIL----------PIERRNEV-----ISFVKSGLKDLSLSRKTFDW 216
               +    +   ++ +          P+    +             +     S  T   
Sbjct: 382 KARLMKWIEDMGWDWCISRQRLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKC 441

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G         ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y  
Sbjct: 442 GNSNLVAETDVLDTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYTM 500

Query: 277 --AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  ++   P  + V +       G K+SKS GNV++P E+ +  G DALR +      
Sbjct: 501 VRSLAITGEKPWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW-ASNST 559

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESIL 391
            GKD  +    ++          I N    +   I  +    + +  + +     D  IL
Sbjct: 560 IGKDVPFAWKEVE--YGGRFLRKIWNACKFAKMNISDETISELKSLNSISIENPVDLWIL 617

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST--- 446
           S  + ++ ++ +++ N  I+  + ++   +     D Y +  K     K   + A     
Sbjct: 618 SKLNNLISKVSDDLGNYKINTVV-EIQKFLWHEFCDNYIEMVKHRLYNKEESESAQQEKL 676

Query: 447 -VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
              Y   +VI +   LL  F P  A  + +I  + D +  +   D+RL
Sbjct: 677 MAQYTLYKVITESVKLLTPFTPHFAEIVGEIYEIDDLHTSWPVSDERL 724



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                D+N    R     L IS  +D    T    +    
Sbjct: 91  VEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVRSLGISIDWDREYITMNPDYVRKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + K+ +KG IY+G +   +  R E
Sbjct: 151 QTAFLKMYEKGLIYRGKHPVNWCPRCE 177


>gi|26553494|ref|NP_757428.1| valyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26453500|dbj|BAC43832.1| valyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 872

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/363 (20%), Positives = 143/363 (39%), Gaps = 43/363 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  E +F ++S Y  K++   +S  +      +  + +    + L D  +SR+   W
Sbjct: 361 VEPMMSEQWFVKVSEYSKKVIELQKSSKKIQFFPIKFEKNLINWMTNLNDWCISRQ-LWW 419

Query: 217 G--IKIPDDPQ---------------------YIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G  I +                           ++  W  +    +TTT        SK 
Sbjct: 420 GHQIPVWYKKDSKEIYVGTKPPKNEELYVRDNDVLDTWFSSGLWPITTTD----ALKSKD 475

Query: 254 KFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
             +P ++ V G DI+ F        +  L   +P      +         K+SKSLGN +
Sbjct: 476 ALFPTNVLVTGFDIIFFWVFRMMFFSLYLKKEVPFKHCYITGLIRDEHNNKMSKSLGNGV 535

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP +VIE+ G DALR FL+   + G+D  Y ++ +K        N + N   R V M   
Sbjct: 536 DPNDVIEKYGADALRLFLLSSSSPGEDLCYVEEKVKSCWG--FINKLWNSF-RYVEMNSS 592

Query: 372 DYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D++     TP    + D+ IL+  ++   E  +         ++ +++    +   + Y 
Sbjct: 593 DFNFDEDKTPKNLEDFDKWILNKFNKAYSEFLQQFNKYNFLVSIKKILDFTWDDFCNTYI 652

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQ 487
           +  K     + +       L+V   +I+++ IL     P + + ++D   F   ++   +
Sbjct: 653 ELSKNRTSNQESK------LWVLNYLIKKILILFHPMCPFVTSNLYDNFKFKTKDSILLE 706

Query: 488 SLD 490
            LD
Sbjct: 707 RLD 709



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 18/153 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA    I D L RF+ L GL   +  G D  G       +   
Sbjct: 47  YSILLPPPNVTGNLHLGHALNGTIQDCLIRFNNLKGLSAYWICGMDHAGIATQTKYEKYL 106

Query: 67  VTTK----------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
              K                 +      N R+    +     Y++   T EK+ ++    
Sbjct: 107 RENKISNKDKSRDEKVADLFEWSQNVGNNIRNQWKNMGFFLDYENEHFTLEKKSNEMVNQ 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ K+ + G IY+      + ++ ++  ++ EV
Sbjct: 167 VFVKMYNDGLIYRSKTLVNWDIKLQSAISNIEV 199


>gi|90101533|sp|Q8EX08|SYV_MYCPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 869

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/363 (20%), Positives = 143/363 (39%), Gaps = 43/363 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ M  E +F ++S Y  K++   +S  +      +  + +    + L D  +SR+   W
Sbjct: 358 VEPMMSEQWFVKVSEYSKKVIELQKSSKKIQFFPIKFEKNLINWMTNLNDWCISRQ-LWW 416

Query: 217 G--IKIPDDPQ---------------------YIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           G  I +                           ++  W  +    +TTT        SK 
Sbjct: 417 GHQIPVWYKKDSKEIYVGTKPPKNEELYVRDNDVLDTWFSSGLWPITTTD----ALKSKD 472

Query: 254 KFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
             +P ++ V G DI+ F        +  L   +P      +         K+SKSLGN +
Sbjct: 473 ALFPTNVLVTGFDIIFFWVFRMMFFSLYLKKEVPFKHCYITGLIRDEHNNKMSKSLGNGV 532

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP +VIE+ G DALR FL+   + G+D  Y ++ +K        N + N   R V M   
Sbjct: 533 DPNDVIEKYGADALRLFLLSSSSPGEDLCYVEEKVKSCWG--FINKLWNSF-RYVEMNSS 589

Query: 372 DYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           D++     TP    + D+ IL+  ++   E  +         ++ +++    +   + Y 
Sbjct: 590 DFNFDEDKTPKNLEDFDKWILNKFNKAYSEFLQQFNKYNFLVSIKKILDFTWDDFCNTYI 649

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQ 487
           +  K     + +       L+V   +I+++ IL     P + + ++D   F   ++   +
Sbjct: 650 ELSKNRTSNQESK------LWVLNYLIKKILILFHPMCPFVTSNLYDNFKFKTKDSILLE 703

Query: 488 SLD 490
            LD
Sbjct: 704 RLD 706



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 18/153 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           H+GHA    I D L RF+ L GL   +  G D  G       +   
Sbjct: 44  YSILLPPPNVTGNLHLGHALNGTIQDCLIRFNNLKGLSAYWICGMDHAGIATQTKYEKYL 103

Query: 67  VTTK----------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
              K                 +      N R+    +     Y++   T EK+ ++    
Sbjct: 104 RENKISNKDKSRDEKVADLFEWSQNVGNNIRNQWKNMGFFLDYENEHFTLEKKSNEMVNQ 163

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++ K+ + G IY+      + ++ ++  ++ EV
Sbjct: 164 VFVKMYNDGLIYRSKTLVNWDIKLQSAISNIEV 196


>gi|304311784|ref|YP_003811382.1| Valyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797517|emb|CBL45737.1| Valyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 943

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 127/400 (31%), Gaps = 85/400 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + ++ R        +   E      +P +  N   ++++  L+D  +SR+   W
Sbjct: 364 IEPWLTDQWYVRTEGLAGPAIRAVEEGQIQFVPKQYENMYFAWMR-NLQDWCISRQ-LWW 421

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  +    D                               ++  W  +     +T G+ +
Sbjct: 422 GHRVPAWYDEQGKVYVGRSEQEVRAHYSIPEETTLRQDDDVLDTWFSSALWTFSTLGWPE 481

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
                +    P ++ V G DI+ F         +           +P             
Sbjct: 482 ATPELRTFH-PTEVLVTGFDIIFFWVARMIMMTMHFIKDENGQPQVPFKTVYVHGLVRDS 540

Query: 299 KGEKISKSLGNVIDPIEVIE-------------------------------------EVG 321
           +G+K+SKS GNV+DP+++I+                                       G
Sbjct: 541 EGKKMSKSKGNVLDPLDIIDGIDLETLVSKRTTGLMQPKDAEKIEKRTRKEFPEGIASYG 600

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-MIPTP 380
            DALR+  +   + G+D  +D   L+        N I N  +R V M  +  D  +    
Sbjct: 601 TDALRFTFLSLASTGRDIKFDIARLEG--YRHFCNKIWN-AARYVLMNTEGQDCGLNSAD 657

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
              +  D  ILS  +   Q++ + +       A   +   V     D Y +  K     +
Sbjct: 658 VELSIVDRWILSQLASAQQQVSKALDEYRFDHASQALYDFVWNEYCDWYLELSKTVLNSE 717

Query: 439 TNPDRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  D A        V+V+  +  +    +P +   I+  +
Sbjct: 718 SASDAAKRGTRRTLVQVLETILRMAHPMIPFITESIWKNI 757



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GH +   I D L R+HR+ G + L+  GTD  G       + 
Sbjct: 31  RPYCIMIPPPNVTGSLHMGHGFNNAIMDTLIRYHRMKGENTLWQVGTDHAGIATQMVVER 90

Query: 65  AGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              K++  +       +R  R +   +D S + F  T +    +
Sbjct: 91  QLAAQGITRHDLGRSAFLDKIWEWKEQSGGTITRQIRRLGSSVDWSRERF--TMDAGLSN 148

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++ ++ + G IY+G     +  R     +D EV    +         P+
Sbjct: 149 AVQEVFVRLYEDGLIYRGKRLVNWDPRLHTAISDLEVLSEEEQGSMWHFRYPL 201


>gi|303286673|ref|XP_003062626.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456143|gb|EEH53445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 967

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/432 (15%), Positives = 122/432 (28%), Gaps = 77/432 (17%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +        L+ + + N  ++   A     + +   +    E  + FR     
Sbjct: 351 MRLGLCSRSKDVIEPMLKPQWWVNCQQMAADACEAARSKELEILPPFMEPTW-FRWLENI 409

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP--------- 224
                  +      +P            +       S +   W I   +D          
Sbjct: 410 RDWCISRQLWWGHRIPAYYVRFDDETEDAAGMPGGSSEQLDRWVIGREEDEARIAATEKF 469

Query: 225 ----------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
                     + ++  W  +     +  G+ D      A+F+P  L   G DIL F    
Sbjct: 470 PGRAFTLEQDEDVLDTWFSSGLFPFSVFGWPDESP-DLAEFYPTSLLETGHDILFFWVAR 528

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI--------------- 317
           +      L+  +P  +           G K+SKSLGNVIDP+ VI               
Sbjct: 529 MVMMGMKLTGKVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPLHVIEGISLPELNKTLEGG 588

Query: 318 ----------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                                  + G DA+R+ LV   A G+D   D   +         
Sbjct: 589 NLEEKEIKKAAQGQAQDYPDGIPQCGTDAMRFALVAYTAQGRDINLDVLRVVG------Y 642

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGA--------FTESDESILSVCSRVLQEIRENMQN 407
               N +  ++   + +       P             +    LS  +   +   E M+ 
Sbjct: 643 RHWCNKMWNAIRFAMMNLGEGYAPPETPLTCGDARLPPASRWALSRFNHAAKVTVEAMEV 702

Query: 408 QLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
              + A   V +       D + +  KP  +   + +            +     LL  F
Sbjct: 703 YGFNDATTAVYAFWQYDVCDVFIELVKP-VVNGDDENAKKATRDTLWTCLDGGLRLLHPF 761

Query: 466 VPKLANKIFDIL 477
           +P +  +++  L
Sbjct: 762 MPFVTEELWQRL 773



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 22/190 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  +           HIGHA    I D + R+ R+ G + L+  GTD  G      
Sbjct: 30  SSKPKFVVVIPPPNVTGALHIGHALTNSIQDTIVRWRRMSGYEALWVPGTDHAGIATQTV 89

Query: 62  AQNAGVTTKVFVD----------------QNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
            +      +                    +     + +   LD S + F  T +      
Sbjct: 90  VEKKLAREEGITRHELGREKFLEREAYGGKIFNQLKRLGSSLDWSRERF--TMDDMLSKA 147

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK----GADGQYYNAQHNPVQWME 161
            +  + ++  +G +Y+      +  + +   +D EV      G+       Q  PV++  
Sbjct: 148 VKEAFVRMHAEGLVYRDNRLVNWCCKLKTAISDIEVDHIDLEGSKELVVPGQDAPVEFGS 207

Query: 162 EEGYFFRLSA 171
              + +    
Sbjct: 208 IWSFAYPYED 217


>gi|71483030|gb|AAZ32464.1| valyl tRNA synthetase [uncultured euryarchaeote Alv-FOS1]
          Length = 855

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 68/460 (14%), Positives = 146/460 (31%), Gaps = 36/460 (7%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
             + F  G ++ G+   +A + A +  +          ++   ++             + 
Sbjct: 279 YKLQFLEGINDEGRMAERAGKFADMPVEEARRAIIEELKNEGFLI-------------KQ 325

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + +         I       W+    +       +    +      +    +W++ 
Sbjct: 326 EKIEQNVGVCWRCHTPIELINKEQWFINILKLKDEVRSMADEINWAPEFMKKRLYEWIDS 385

Query: 163 EGYFF---RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
             + +   R   +   +  +   +   ++P     + +        D     K    G  
Sbjct: 386 LEWDWVVSRQRYFATPIPIWECENGHAVVPKFEDLQKMDRHVDPTVDPPPYEKCPVCGAP 445

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPA 277
           +      +   W+D+  + L  T +  +      K +P  L     DI+R  A Y     
Sbjct: 446 LHGTED-VFDTWVDSSISPLYNTFWARDEKM-FNKLYPMSLRPQSHDIIRTWAFYTILRC 503

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
              +   P          +   G  +  S GNV+DP+E+I+E G DA R +       G+
Sbjct: 504 GATTGEKPWNDIFVDSFILAPDGRPMHTSWGNVVDPLEIIDEYGTDAFR-YFAGNCTIGQ 562

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +    +K+     L   + NL     + I       I  P      D  +L+  S+V
Sbjct: 563 DTPFRYKDVKR--GRKLIIKLYNLGRFVKNAIADG----ITEPDKLKLMDRWLLTEYSKV 616

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++E  E M +    +A+  + +       D Y +  K    +++         Y      
Sbjct: 617 VKEATELMDSYRYDKAIKLIENFTWHIFADHYVEMVKHRIGEES-------TKYTLYTAF 669

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             +  +   F+P +  +++  LF   E      L    +P
Sbjct: 670 LGIIKMFSPFMPHITEELYQELFKEREGEKSIHLTSWPEP 709



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I     Y + + HIGHA      D++AR+ R+ G +V F    D +G  I   
Sbjct: 27  SDKPVFSIDVPPRYASGRLHIGHATHYSHIDIIARYRRMRGYNVFFPLCFDVNGMPIEVN 86

Query: 62  AQNAG-----VTT--------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +         T         + F + N         +L  S D   + +T    +    
Sbjct: 87  VEKKHGIKMRETPRHEFIKLCEEFANANIGEMISQFKLLGESMDPSIYYQTDAPYYRRIT 146

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ + K+ +KG +YK  +   +  R      D E+  
Sbjct: 147 QLSFVKMFEKGLVYKAKHPVNWCPRCGTAIADAEIEY 183


>gi|323359815|ref|YP_004226211.1| leucyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323276186|dbj|BAJ76331.1| leucyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 857

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 5/187 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + Y+     YP+   H+GHA   + +D++ARF R  G +VL   G D  G     AA
Sbjct: 41  KRPRKYVLAMFPYPSGDLHMGHAENYLYSDIVARFWRHRGYNVLNPIGWDSFGLPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G     +   N    +       +S+D    + T++  ++   + L++K+ +KG  Y
Sbjct: 101 IKRGADPVEWTYANIAQQKASLKDYGVSFDWSRVLHTSDPEYYRWNQWLFQKLYEKGLAY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V      +   A    V   +   +F R++ Y D+LL   
Sbjct: 161 RKDALVNWDPVDQTVLANEQVLPDGTSERSGA---VVVKKKLTQWFLRITDYADRLLDDL 217

Query: 181 ESHPEFI 187
                F 
Sbjct: 218 NQLEGFW 224



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 103/285 (36%), Gaps = 36/285 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNY----LTTTGYLDNPDGSKAKFWPADLHVI 263
            +     + G  +  DP   M  ++D+   Y       +          +K+ P D ++ 
Sbjct: 518 WVQVTDPETGQTLLRDPD-TMDTFVDSSWYYLRFLSPNSETEAFSGREASKWGPVDFYIG 576

Query: 264 GKDILRFHAIYWP----AFLLSANLPLPK---KVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y      A      +   +    + + G ++  G K+SKS GN++   E 
Sbjct: 577 GVEHAILHLLYARFITKALFDMGLVEFTEPFSSLINQGMVILDGAKMSKSKGNLVLFQEE 636

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++  G DALR  L        D   D + +     A         ++R++ +     D  
Sbjct: 637 LDAHGADALRVALAFAGPVEDDK--DWNDVSTTGAAKF-------LARALRIAH---DVD 684

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T   + E D+S+  V  R+L E    ++    +  +A+++ LV+   +  D       
Sbjct: 685 SETDVVWAEGDQSLRRVTHRLLAEAPNLIEQTKFNVVVARLMELVNATRKAID------- 737

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  A T      E    +A+ L  F P  A +++  L    
Sbjct: 738 -----GSAGTSDPAVREAAEVIAMTLDLFAPHTAEEMWQTLGYDG 777


>gi|325474629|gb|EGC77815.1| isoleucyl-tRNA synthetase [Treponema denticola F0402]
          Length = 1100

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 73/475 (15%), Positives = 146/475 (30%), Gaps = 46/475 (9%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR---DMADVLDI--SYDDFIRTTE 99
           V      D   +   + +   G+  K    Q     +    +     I  SY    R + 
Sbjct: 372 VPTVCPVDAECKFTHEVSDYQGLFVKDADKQIMERLKTEGKLFKKAQILHSYPHCWRCSS 431

Query: 100 KRHHDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
              +      +  ++   D               ++   +    E  +           N
Sbjct: 432 PLIYRAVASWFVSVTKIKDKLLNANSKINWQPDHIKTGRFGKWLEGARDWAISRNRYWGN 491

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P+   +                          L            K  +  +S+  K   
Sbjct: 492 PIPIWKCPDCG-----------ETICVGSREELKELSGVFPDDMHKHFVDKISIPCKKCG 540

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
             +K   +   ++  W ++ +       Y         K +PAD    G D     F+ +
Sbjct: 541 GTMKRVPE---VLDCWFESGSMPYAQQHYPFENKEHFEKNFPADFISEGLDQTRGWFYTL 597

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A  L         + +   +   G+K+SKSL N  DP EVI++ G DALR FL+   
Sbjct: 598 TILAAALFDEPAFKNCIVNGLVLAEDGKKMSKSLRNYTDPNEVIKQFGADALRLFLMNSN 657

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--------- 383
                D  Y  +G++  +   L   I    S S  +   + DG+ P   A          
Sbjct: 658 VVKADDLKYSDEGVRDVLKGIL---IPFWNSYSFYITYANIDGVKPPHNAKVDGKDEGVE 714

Query: 384 -------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                     D  ILSV  +++ ++ E +    + +A+  ++  +  ++ ++  +     
Sbjct: 715 SFLSKLNNPLDLWILSVTEKLVADVTEALDKYDLSQAIPPMVEYIDLLNNWYIRRSRRRF 774

Query: 437 KKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
            K+  D   +         +++ +++    VP +   I+  L    +       D
Sbjct: 775 WKSENDGDKAQAYETLYRALKKFSLVAAPVVPFITESIWQNLRTEKDALSIHLAD 829



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 23/163 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+         +    PH GH     I D++ R+  + G  V    G D HG  +    
Sbjct: 37  GRDNYIFFDGPPFATGLPHFGHFVPGTIKDIIPRYKTMKGFRVERRFGWDCHGLPVENLI 96

Query: 63  QNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +                         +   +V +  +    +   +D   D   +T E  
Sbjct: 97  EKELGLNSKTDIEKYGIDKFNEACRASVLRYVKEWKQTITRLGRWVDFENDY--KTMEPA 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++   + K + +KG +Y+G Y   Y  R     ++ E+  G
Sbjct: 155 FMESIWWVMKSLWEKGLLYEGYYILPYCPRCSTVLSNHELNLG 197


>gi|255714076|ref|XP_002553320.1| KLTH0D14058p [Lachancea thermotolerans]
 gi|238934700|emb|CAR22882.1| KLTH0D14058p [Lachancea thermotolerans]
          Length = 880

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 76/201 (37%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+YI +   YP+   HIGH     I D L RF++L+G +V+   G D  G     AA  
Sbjct: 49  KKMYILSMFPYPSGILHIGHLRVYTITDALNRFYKLNGFNVVHPMGWDAFGLPAENAAIE 108

Query: 65  AGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             V    +  QN    R   D +  D+ +D  + T    ++   + L+ ++   G  Y+ 
Sbjct: 109 RKVNPATWTMQNISKMRVQLDNMLADLDWDREVTTCNPDYYKHTQKLFLELFKHGLAYQK 168

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V               V+  +   +F  ++ +   L      
Sbjct: 169 DAEINWDPIDQTVLANEQVDSQ---GRSWRSGALVEKRQLNQWFLGITKFAHSLQEDLNL 225

Query: 183 HPEFILPIERRNEVISFVKSG 203
             ++   ++   +       G
Sbjct: 226 LKDWPQNVKTMQKNWIGESYG 246



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 83/215 (38%), Gaps = 30/215 (13%)

Query: 274 YWPAFLLSANLPLPKKVF-SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +  +  L    PL   +  +    L   EK+SKS  N  DP + I + G DA R  ++ +
Sbjct: 605 FLKSEELDFGDPLNPVIKATGMKPLVSFEKMSKSKYNGADPDKCISDHGPDATRAHVLFQ 664

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK------DYDGMIPTPGAFTES 386
                   +D+  +          GI   ++R +++ ++      DY+       A T  
Sbjct: 665 APVNDVLSWDESKII---------GIERWLTRIITLAIRITKQAPDYNEHFAASTAMTGK 715

Query: 387 DESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           + S  +   ++LQ I ++  ++  ++  ++  + L +      +A       +T+     
Sbjct: 716 EISFHNEVQKLLQAITDSFSESLSLNTVISDYMKLTNA----IEAALKSREIRTD----- 766

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               + +   + L   +    P ++ +  +IL V 
Sbjct: 767 ----LVLHSFKDLITAIYPVTPTISEEAREILNVN 797


>gi|312793533|ref|YP_004026456.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180673|gb|ADQ40843.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 920

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 112/301 (37%), Gaps = 23/301 (7%)

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G    +    IM VW D+ +++             +   WP D+++ G D     F + 
Sbjct: 519 CGCSEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWFQSS 572

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A       P    +     +  +G+K+SKS GNVI P ++I E G D LR + V   
Sbjct: 573 LLTAVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCVSAD 632

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESIL 391
               D    K+ +K+    ++   I N   R +   L D++      G     E D   L
Sbjct: 633 YTT-DMRISKEIIKQL--TEIYRKIRNTA-RFLLGNLYDFNPKTDKVGYEDLKEIDRWAL 688

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRASTVL 448
                +++++ +  +    ++    V +   +   + Y D  K      K+      +  
Sbjct: 689 QRLYMLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRRSAQ 748

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFMLHKT 502
            V  E++  L  L+   +   A +I+  +   +E+        +  +D+ +     L + 
Sbjct: 749 TVMYEILVALTKLIAPILSFTAEEIWQNIAFKEEDAESVFLTSWPKVDEGILKDETLREK 808

Query: 503 F 503
           +
Sbjct: 809 W 809



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R+    L +   +++   T + +     
Sbjct: 105 VIKKFGVNRHEVDPVEFRKKCKEFALNYIDIQREQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTY 207


>gi|229496879|ref|ZP_04390587.1| isoleucine-tRNA ligase [Porphyromonas endodontalis ATCC 35406]
 gi|229316197|gb|EEN82122.1| isoleucine-tRNA ligase [Porphyromonas endodontalis ATCC 35406]
          Length = 1136

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 100/281 (35%), Gaps = 8/281 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDIL--RFHAIY 274
           K+    Q ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 601 KVMRREQDLIDVWFDSGAMPYAQVHYPFEHKEEIESGELFPADFIAEGIDQTRGWFFTLH 660

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 661 AISTMVRGSVAFKNVLANGLVLDKNGNKMSKRLGNAVDPFATIEQYGSDPLRWYMITNAS 720

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILS 392
              +  +D +G+K+                ++   L  +       +     E D  I S
Sbjct: 721 PWDNIKFDPEGIKEVSRKFFGTLYNTYQFFALYANLDGFIASEQPLSDSERPEIDRWIRS 780

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +   ++ E+ +++ N    +A   +   V  +  + Y    +             +    
Sbjct: 781 LLHSLIAEVDQHLANYEPTKAGRAIDDFVSINLSNWYVRLSRKRFWAGEMSQDKLSAYQT 840

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             E +  +A L+    P  A+ ++  L     +       +
Sbjct: 841 LYECLTTIARLIAPIAPFYADHLYRDLVGDGRSVHLADFPE 881



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 55/202 (27%), Gaps = 24/202 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +             N  P I H     + D+  R+  + G  V    G D HG  +   
Sbjct: 38  TDAPSFIFYEGPPSANGMPGIHHVIARSLKDIFCRYKTMKGYRVDRRAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  +  +   +   +  D    T + ++
Sbjct: 98  VEKLLGITKDSIGKTISVAEYNATCRREVMKYTAEWEQLTKKMGYWVDMDHPYITYKNKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L   +  KG +YKG     YS            N    Y+        AQ   +
Sbjct: 158 IETLWWLLADLHKKGFLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTVCTAQFKVL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSY 179
              +E   +            +
Sbjct: 218 NPKKEWSNWGDAYFLAWTTTPW 239


>gi|124025701|ref|YP_001014817.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|189083137|sp|A2C242|SYL_PROM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123960769|gb|ABM75552.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 862

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 84/205 (40%), Gaps = 5/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +    Y  +   YP+   H+GH    +I DVLAR+ R+ GL+VL   G D  G     
Sbjct: 38  VNKENTFYALSMFPYPSGSLHMGHVRNYVITDVLARYKRMKGLNVLHPMGWDSFGLPAEN 97

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA     +   + D+N    +D  D L +S D    + T ++ ++   + ++ ++     
Sbjct: 98  AAIERETSPSTWTDKNISQMKDQLDRLGLSIDWSKEVTTCKEDYYKWTQYIFNQLHKNNL 157

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V          A+   V+  E   +F R++++ + L  
Sbjct: 158 AYQKKATVNWDPIDQTVLANEQVDAEGKSWRSGAK---VEKKELNQWFLRITSFAEDLNK 214

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
              +  ++   +    +       G
Sbjct: 215 DLVTLNDWPDRVRVMQKNWIGKSIG 239



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 76/192 (39%), Gaps = 20/192 (10%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK   +   I    EK+SKS  N +DP  VI++ G D  R F++ +    KD  +D   +
Sbjct: 609 PKDPLTGENIEIIYEKMSKSKYNGVDPSVVIDKYGADTARMFILFKAPPEKDLEWDDSDV 668

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +        +   V  +  +   +              DE  L + +  ++EI +++ 
Sbjct: 669 EGQYR--FIQRLWKFVINTFKLTNNN---SRSNIEKEKSKDEEALRLINIAIKEITDDLD 723

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
           N   + A+++++ +V+ +    +      L K               VI  L  +   F 
Sbjct: 724 NLQFNTAISELMKVVNGLSLIVNYCSNETLNK---------------VISILVKITSPFS 768

Query: 467 PKLANKIFDILF 478
           P +A +++  + 
Sbjct: 769 PHIAEELWKTIG 780


>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 924

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 80/460 (17%), Positives = 149/460 (32%), Gaps = 30/460 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV---TTKVFVDQNSRNFRDMADVLDI--SY 91
           F       +      DE G    +A    G+        + Q       +  +  I  SY
Sbjct: 333 FLVGQKYGLPVLCPVDERGYMTEEAPGFEGMFYEDANKAITQKLEEVGALLKLGFITHSY 392

Query: 92  DDFIRTTEK-RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               RT +      T +        + ++ +      +          + V    D    
Sbjct: 393 PHDWRTKQPTIFRATTQWFASIDKIRSELLQAIKETKWIPEWGEIRIHNMVRDRGDWCIS 452

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +             F     +  +      H   +      N         L     +
Sbjct: 453 RQRA-----WGVPIPVFYGENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFT 507

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
             +   GI        IM VW D+ +++                  PADL++ G D    
Sbjct: 508 HPSSPNGI--FTKETDIMDVWFDSGSSHQAVLVER------DDLMRPADLYLEGSDQYRG 559

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKSLGNV+ P +V+E+ G D LR +
Sbjct: 560 WFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQFGADILRLW 619

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTES 386
           +        D       LK+   +++   I N   R +   L D+D        G   E 
Sbjct: 620 VASVDYQA-DVRISDHILKQV--SEVYRKIRNTF-RFMLGNLFDFDPNQNAVPIGELGEV 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA 444
           D  +L+  ++++ ++++   +        ++     V     Y D  K     +    RA
Sbjct: 676 DRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRA 735

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              V  V  E +  LA L+   +P  A+++++ +    EN
Sbjct: 736 RRAVQTVLYETVVALAKLIAPILPHTADEVWEHIPNRREN 775



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  ++G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             +  +   N R     L +   +D+   T +  +     
Sbjct: 105 LAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 214


>gi|195402937|ref|XP_002060056.1| GJ15519 [Drosophila virilis]
 gi|194141854|gb|EDW58267.1| GJ15519 [Drosophila virilis]
          Length = 870

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 5/185 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y+ +   YP+   H+GH     I+D +ARF R+ G +V    G D  G     AA   
Sbjct: 63  KYYVLSMFPYPSGNLHMGHVRVYTISDAVARFQRMCGKNVFQPIGWDSFGLPAENAANQR 122

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV    +  QN    +   + L  S+D    + T+  +++   + L+  +   G  Y+  
Sbjct: 123 GVAPADWTQQNIAQMKQQLERLGCSFDWAHELSTSSPQYYRWTQSLFLMLHKHGLAYQNE 182

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
               +   D+    D++V          A+   V+    + +F R +A+  +LL   +  
Sbjct: 183 ALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLKQWFIRTTAFAKQLLDGLDDP 239

Query: 184 PEFIL 188
                
Sbjct: 240 RLRDW 244



 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 48/368 (13%), Positives = 102/368 (27%), Gaps = 70/368 (19%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+  +   ++         +L  +    G   
Sbjct: 395 KLQDWLISRQRYWGTPIPIVHCPKCGAVPVPEQQLPVTLPPRDADKDALRCECPKCGEPQ 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      +      A     F P DL++ GK+    H  Y  
Sbjct: 455 AQRETDTMDTFVDSSWYYLRYLDAHNANAIFDAALVQNFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFLLS---ANLPLPKKVFS----------------------------------------- 292
                     L    + FS                                         
Sbjct: 515 FMNHFLHSCGLSPTTEPFSRLLVQGMVMGRSFRVKGSGRYVREPEVEIVNAKKNQALLKA 574

Query: 293 -HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
               ++   EK+SKS  N ++P ++  E G D  R  ++ ++A      +        +N
Sbjct: 575 TQEPVVMSWEKMSKSKLNGVEPDDMFNEYGTDTTRLIILADVAPTSHRNWSSATFPGILN 634

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
                 +     R+        D +     AF   D  +    +  ++    N +    +
Sbjct: 635 WQKRLWLTVEEFRAAREAPS-TDLVDTGSEAFLAEDAKLFDARNFYVKGATFNYRHAHQL 693

Query: 411 HRALAQVISL---VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
             A++++  L   +    ++   Q          +RA               I+L    P
Sbjct: 694 SVAISKMQGLTNSLRRTPKHIQRQ------GKQFERALAAQ----------LIMLAPMAP 737

Query: 468 KLANKIFD 475
             A++++ 
Sbjct: 738 HFASELWS 745


>gi|229822567|ref|YP_002884093.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229568480|gb|ACQ82331.1| leucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 846

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 6/175 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y+ T   YP+   H+GH     +ADVLAR+ R+ G DVLF  G D  G     AA  
Sbjct: 43  ERRYLVTMFPYPSGDLHMGHGEVFALADVLARYWRMRGYDVLFPIGWDSFGLPAENAAIR 102

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G +  V+   N            +S+D      T++   +   + ++ ++ ++G  Y+ 
Sbjct: 103 RGESPAVYTSDNIATQAASIRRYGVSFDWTRRFHTSDPEFYRWNQWIFLRMVEQGLAYRA 162

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             S  +  +D     +++V  G           PV   +   +FFR++ Y D+LL
Sbjct: 163 ASSVNWCPQDGTVLANEQVVSG----RCERCGTPVVRRDLVQWFFRITDYADRLL 213



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 109/318 (34%), Gaps = 46/318 (14%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            +       G     D    M  ++D+      YL+ T      D   A+ W PA  +V 
Sbjct: 477 WVDVPCPRCGGPGRRDTD-TMDTFVDSSWYFLRYLSPTFTGGPFDAEDARRWMPAVRYVG 535

Query: 264 GKDILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y            L  ++     V + G ++++G  +SKSLGN ++  E 
Sbjct: 536 GVEHATGHLLYARFMQKVLRDLGLVDDVEPFAAVTNQGQVINEGRAMSKSLGNGVELAEQ 595

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN-GIGNLVSRSVSMILKDYDG 375
           ++  G DA+R  +V      +D  +          ADL+  G    ++R++ +       
Sbjct: 596 LDAYGSDAVRLTMVFAGPPEEDIDW----------ADLSPAGAERFLARALRLARDVTSS 645

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
               P   + +   +  V  R ++++   ++    +  +A+V+ LV+   R  D      
Sbjct: 646 PGADPAGGSAT---LRRVTHRTVRDVEGLLEGLRFNVVVARVMELVNAARRTLDGAAGGG 702

Query: 436 LKKTNPDRA------------------STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   R                           E     AILL    P  A +++  L
Sbjct: 703 RSASGGGRPEAGGGREGDDGGPGDALTGAADPAVREAAEVAAILLSLVAPYTAEEMWAAL 762

Query: 478 FVADENRC--FQSLDQRL 493
                     +  +D  L
Sbjct: 763 GRGPSVAAAPWPEVDPAL 780


>gi|262381098|ref|ZP_06074236.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296275|gb|EEY84205.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 1140

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 128/395 (32%), Gaps = 22/395 (5%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADG 147
           FIRTT  R              +            +L+D        +     +++  DG
Sbjct: 477 FIRTTACRERMIELNNTINWKPQSTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDG 536

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V+   E     +    +               P +   E    +      +
Sbjct: 537 SEEKCIGSVVELFGEIEKSVKAGFMESNPYKD-------FAPGDYTKENYEKIDLHRPYV 589

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGK 265
                    G  +  +   ++ VW D+         Y           + +PAD    G 
Sbjct: 590 DDIILVSASGKPMKRETD-LIDVWFDSGAMPYAQIHYPFESLKEFDNRQIYPADFIAEGV 648

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F  ++    ++  ++     V +   +   G K+SK LGN +DP   IE+ G D
Sbjct: 649 DQTRGWFFTLHALGTMIFDSVAYKAVVSNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSD 708

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PG 381
            LR++++   +   +  +D DG+++                ++   +  +D   P     
Sbjct: 709 PLRWYMITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFDYSDPDVEWS 768

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
              E D  ILS+ + +++++   ++     RA   +   V++   + Y    +       
Sbjct: 769 KRPEIDRWILSLLNSLVKDVDGYLEAYEPTRAGRAISDFVNDNLSNWYVRLNRRRFWGGG 828

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +   +        +  +A L+    P  A+++F
Sbjct: 829 MTEDKLSAYQTLYTCLETVAKLMAPIAPFYADQLF 863



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGHPTFVFYEGPPSANGMPGIHHVIARSIKDIFCRYKTMKGFLVNRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A   TK  +                  + ++ + D+   +   +  ++   T + R+
Sbjct: 98  VEKALGITKEDIGKKISVAEYNAACRKDVMKFTKEWEDLTQKMGYWVDMENPYITYDNRY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRD-----EAYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L K++  KG +YKG     YS            N    Y+        AQ + +
Sbjct: 158 IETLWYLLKELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCTAQFHIL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              + E   F    +                P    +     V   +  L++       G
Sbjct: 218 DP-KPEMAQFGDPYFLAWT----------TTPWTLPSNTALCVGPNITYLAVQTYNPYTG 266

Query: 218 IKI 220
           I +
Sbjct: 267 IPM 269


>gi|147773742|emb|CAN74190.1| hypothetical protein VITISV_036142 [Vitis vinifera]
          Length = 893

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D+LARF R+ G +VL   G D  G    +
Sbjct: 32  TSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQ 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+   +N   FR     L  SYD    I T E  ++   + ++ ++  +G 
Sbjct: 92  YAIETGTHPKITTTRNIARFRSQLKSLGFSYDWEREISTIEPEYYKWTQWIFLQLLKRGL 151

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 152 AYQAEVPVNWCPALGTVLANEEVVDG----VSERGGHPVIRKPMRQWILKITAYADRLLE 207

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 208 DLDDLNWPESVKEMQRNWIGRSE 230



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 73/185 (39%), Gaps = 39/185 (21%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI+P +V+ E G D+LR + +          ++  G++         G+  
Sbjct: 649 HKMSKSRGNVINPDDVVLEYGADSLRLYEMFMGPFRDSKVWNTSGIE---------GVHR 699

Query: 361 LVSRSVSMIL-------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            + R+  +I+          DG +   G  T  D+  L    R + ++ E +     +  
Sbjct: 700 FLGRTWRLIVGAPLPNGAYSDGTVVVDGEPT-VDQ--LRSLHRCIDKVTEEIDGTRFNTG 756

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++ ++  ++   ++   + P                    +I    +LL  + P +A ++
Sbjct: 757 ISAMMEFINAAYKW--DKHPRS------------------IIEAFVLLLSPYAPHMAEEL 796

Query: 474 FDILF 478
           +  L 
Sbjct: 797 WFRLG 801


>gi|57235042|ref|YP_180942.1| leucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123732479|sp|Q3ZA07|SYL_DEHE1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57225490|gb|AAW40547.1| leucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 813

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 6/194 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  T   Y +   HIGH Y  + AD  AR+ RL+G +V+   G D  G     AA 
Sbjct: 32  KPKWYSLTMFPYTSGNLHIGHWYAEVPADCFARYKRLNGFNVMRPVGFDSFGLPAENAAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  +++   N  N R     +     +D  + T    ++   +  + K+ + G  Y+
Sbjct: 92  KHHIHPRIWTLNNVENMRRQLKTIGAMFDWDREVITCLPEYYKWTQWFFLKLYEAGLAYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +A   +++V  G           P    + E +FFR++ Y D+L  +  
Sbjct: 152 AKAPVNWCPSCQAVLANEQVVDGT----CWRCETPTTRRDLEQWFFRITNYADELKDHDG 207

Query: 182 SHPEFILPIERRNE 195
                 +   +RN 
Sbjct: 208 LDWPEKITAMQRNW 221



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 115/286 (40%), Gaps = 38/286 (13%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPA 277
           K   D              Y +        D  K ++W P DL+  G +    H  Y   
Sbjct: 489 KRETDTMDTFMCSSWYFLRYTSPGYDKGPFDPEKLRYWMPVDLYTGGAEHAVMHLFYSRF 548

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F        ++    P  KK+F+ G I+   +K+SKS GNV+ P  ++ EVG DA+R +L
Sbjct: 549 FTKALRDMGIIDFGEPF-KKLFNQGIIVSNHQKMSKSKGNVVTPDNLVAEVGTDAVRAYL 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      + G ++  GL          G+   ++R  ++  ++Y        A  E++  
Sbjct: 608 MFVGPWDQGGEWNDSGLS---------GMSRWLNRVWNLFTEEYTPQ----TASAEAERE 654

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + +++I  +++    +  +A ++ L + + ++              + A+    
Sbjct: 655 LKRTLHQTIKKITMDIERLRFNTVVAALMELSNSLAKF-------------KEAAAVSAE 701

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFV--ADENRCFQSLDQRL 493
                ++  A++L    P +A +++  L +  +  N+ +   D+ L
Sbjct: 702 SWQNSLKTFALMLAPVAPHIAEELWANLDMEYSIHNQSWPKWDEEL 747


>gi|315608285|ref|ZP_07883275.1| isoleucine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250066|gb|EFU30065.1| isoleucine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 1204

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 119/331 (35%), Gaps = 31/331 (9%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    +      +       + G  +  +   ++ VW D+ +       Y  
Sbjct: 623 FVPGDYSQENYDKIDLHRPYVDNIVLVNESGKPMYRETD-LIDVWFDSGSMPYAQLHYPF 681

Query: 247 NPDGSKA--------------------KFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
             +                        KF+PAD    G D     F  ++  A ++  ++
Sbjct: 682 EGEMKHGTEADRQEMVESRYNGMPIPPKFYPADFINEGVDQTRGWFFTLHAIATMVFGSV 741

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                + +   +  KG K+SK +GNV DP E+I + G D +R++++       +  +D +
Sbjct: 742 AFKNVISTGLVLDAKGNKMSKHVGNVTDPFEMIGKYGADPVRFYMMTNSEPWDNLKFDPN 801

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIR 402
           G+ +                ++   + ++D            E D  ILS  S +++ + 
Sbjct: 802 GVDEVRRKFFGTLYNTYSFFALYANVDNFDPEASQVDLAKRPEIDRWILSCLSTLVKGVE 861

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             ++N    RA   + + V++   + Y   + ++ W   K   +   +        +  +
Sbjct: 862 TELENFDPTRAGRLIDNFVNDDLSNWYVRLNRKRFW--GKEMSEDKLSAYQTLYTCLMTV 919

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
           + L+  F P  A++++  L    E+      
Sbjct: 920 SKLIAPFAPFFADQLYHDLGGKMESVHLDHF 950



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 69/240 (28%), Gaps = 30/240 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFVFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMKGFQVHRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V + +  +R + + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASEKYISTEEYNRRCRENVMKFTAEWRSLTEKMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           ++ +T   L K++ +KG +YKG     YS       +  E+     G Y + +   V   
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHEL--NQPGCYRDVKDTTV--- 215

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +  +    +               P    +     V   +  +++       G  +
Sbjct: 216 -TAQFLIKDPRTEWTEWGKPYFLAWTTTPWTLPSNTALCVGPKIDYVAIQTYNLYDGTPM 274


>gi|326799867|ref|YP_004317686.1| valyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326550631|gb|ADZ79016.1| Valyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 881

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 122/356 (34%), Gaps = 49/356 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F ++       L Y  S    ++P +  N         +KD ++SR+   W
Sbjct: 360 IEPKLSMQWFCKMEHLAKPALDYVLSGEVKLIPDKFIN-SYRHWMEHVKDWNISRQ-LWW 417

Query: 217 G--IKIPDDPQY------------------------------IMYVWIDALTNYLTTTG- 243
           G  I    +                                 ++  W  +    ++    
Sbjct: 418 GQRIPAWYNENQDWVVAKTEEEAIVEFERLGKSTKGIYQEEDVLDTWFSSGLWPISVFDG 477

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGE 301
           + +        ++P +  V   +IL F    +           P      +       G 
Sbjct: 478 FKEPNGADINYYYPTNDLVTAPEILFFWVARMMIAGHEFRGKAPFKNVYLTGIVRDKLGR 537

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGN  DPIE++++ G D +R  ++     G D  +D    ++    + AN I N 
Sbjct: 538 KMSKSLGNSPDPIELMDQYGTDGVRVGMLLSSPAGNDLMFDVAYCEQ--GRNFANKIWN- 594

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
              +  ++        P   A  ++ E   S  S  + E+ E+     +  AL  +  L+
Sbjct: 595 ---AFRLVKGWETVNKPATKAELKTVEWFESRFSEAVIEVEEHFAAYRLSDALMTIYKLI 651

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +     Y +  KP          A  +L  T++   Q+  L   F+P +  +++ 
Sbjct: 652 WDDFCSWYLELVKPAY----QQPIAKDLLTFTIDFFEQVLALAHPFMPFITEELWH 703



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 60/189 (31%), Gaps = 19/189 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  GREPYTIVMPPPNVTGVLHMGHMLNNTIQDVLIRRARMQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      D    L  S  +D    T E    D
Sbjct: 92  VAMLKERGINKSDITREEFLKYAWEWKEKYGGIILDQLRKLGASCDWDRTRFTMEPDLSD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQWMEEE 163
                +  +  KG IY+G     +  + +   +D+EV +   + + Y  Q+  V   EE+
Sbjct: 152 AVIDTFIHLYKKGYIYRGIRMINWDPQGKTAVSDEEVIRKEVNQKLYYIQYQVVDTGEEQ 211

Query: 164 GYFFRLSAY 172
               +   Y
Sbjct: 212 TTNNQQRWY 220


>gi|300771344|ref|ZP_07081220.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762014|gb|EFK58834.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 884

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 113/321 (35%), Gaps = 24/321 (7%)

Query: 174 DKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
             +                +NE + +  +        S      GI+  DD   ++  W 
Sbjct: 412 WCISRQLWWGQRIPAWYNDKNEWVVAKTEEEAIQEFTSHGKSAAGIRQEDD---VLDTWF 468

Query: 233 DALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
            +    ++      +  +     ++P +  V   +IL F    +       +   P    
Sbjct: 469 SSGLWPMSVFDGVRNPENQDFNYYYPTNDLVTAPEILFFWVARMMIMGHNYTGKAPFKNV 528

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             +       G K+SKSLGN  DPIE++E+ G D +R  ++     G D  +D    ++ 
Sbjct: 529 YLTGIVRDKLGRKMSKSLGNSPDPIELMEQYGTDGVRVGMLLSSPAGNDLMFDVSYCEQ- 587

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
              + AN I N    +  ++        P P A   S     S  ++ L EI E+  +  
Sbjct: 588 -GRNFANKIWN----AFRLVKGWEISNEPAPEADKTSAAWFESRFNQALVEIEEHFASYR 642

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL----AILLQAF 465
           +  AL     L+       D    W L+   P   S +   T E ++        L   F
Sbjct: 643 LSDALMATYKLIW------DDFCAWYLELIKPAYGSPIPAGTFETVKTFFQRVLTLAHPF 696

Query: 466 VPKLANKIF-DILFVADENRC 485
           +P L  +++ D LF   E + 
Sbjct: 697 MPFLTEELWHDELFGTREAKD 717



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 47/157 (29%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 45  EREPYTIVMPPPNVTGVLHMGHMLNNTIQDVLIRRARMQGKNACWVPGTDHASIATEAKV 104

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                                    + ++         + L  S D      T +    +
Sbjct: 105 VAMLKEQGIDKKSISREDFLKYAWEWKEKYGGIILKQLEKLGASCDWERTKFTMDPDLSE 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + K   +G IY+G     +  + +   +D+EV
Sbjct: 165 AVLDTFIKFYKEGYIYRGVRMVNWDPQGKTALSDEEV 201


>gi|149280348|ref|ZP_01886469.1| valine--tRNA ligase (valyl-tRNA synthetase) [Pedobacter sp. BAL39]
 gi|149228897|gb|EDM34295.1| valine--tRNA ligase (valyl-tRNA synthetase) [Pedobacter sp. BAL39]
          Length = 889

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 18/270 (6%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
           +  DP  +M  W  +    ++    + +  +     ++P +  V   +IL F    +   
Sbjct: 462 VHQDPD-VMDTWFSSWLWPISVFDGFKNPDNKEINYYYPTNDLVTAPEILFFWVARMIMA 520

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                   P      +       G K+SKSLGN  DPI +IE+ G D +R  ++     G
Sbjct: 521 GHEFRGAKPFTNVYLTGIVRDKLGRKMSKSLGNSPDPIGLIEKYGADGVRVGMLLCSPAG 580

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  +D+   ++    + AN I N        ++K ++     P    ++     S  + 
Sbjct: 581 NDLMFDESYCEQ--GRNFANKIWNAFR-----LVKGWEVDASLPNPNGQAILWFESRFNE 633

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            L EI EN +   +  AL     LV +     Y +  KP      + +     L VT+  
Sbjct: 634 ALAEIEENFKQYRLSEALMTSYKLVWDDFCAWYLEMVKPAYQHPIDAE----TLRVTIGF 689

Query: 455 IRQLAILLQAFVPKLANKIF-DILFVADEN 483
             ++  LL  ++P L  +++ D LF   E 
Sbjct: 690 FEKILTLLHPYMPFLTEELWHDELFGEKEE 719



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 48/157 (30%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARMQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  +D    T E    D
Sbjct: 92  VAMLKERGIDKKDLSREEFLKYAWEWKEKYGGIILEQLKKLGASCDWDRTRFTMEDDLSD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                +  +  KG IY+G     +    +   +D+EV
Sbjct: 152 AVIDSFIHLYKKGRIYRGVRMVNWDPAGKTAVSDEEV 188


>gi|72161524|ref|YP_289181.1| isoleucyl-tRNA synthetase [Thermobifida fusca YX]
 gi|84029574|sp|Q47QV9|SYI_THEFY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71915256|gb|AAZ55158.1| Isoleucyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 1060

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 122/420 (29%), Gaps = 35/420 (8%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H                Y    +    L  E    +       DG+Y     N V W  
Sbjct: 398 PHCWRCHTPLMYYAVPSWYIKTTAIKDQLLAENAKTNWVPANVKDGRYGEWLRNNVDW-- 455

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                   S Y    L  +E      + +    E+       L DL   R   D  +   
Sbjct: 456 ----ALSRSRYWGTPLPIWEFPDGRRICVGSLKELSELSGQDLSDLDPHRPYVDDIVIPD 511

Query: 222 DDPQ--------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
            D                 ++ VW D+        G            +PA       D 
Sbjct: 512 PDADPSLPLEQRVARRVPEVIDVWFDSGAMPFAQWGAPHRNQEKFEANFPAQYICEAIDQ 571

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+++   + L+         V     +   G K+SK LGN+++PI V++  G DAL
Sbjct: 572 TRGWFYSLMAVSTLVFGRSSYENVVCLGHILAEDGRKMSKHLGNILEPIPVMDRHGADAL 631

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PT 379
           R+F+    +           L++ V   L     N  S                    P 
Sbjct: 632 RWFMAASGSPWMPRRVGHTVLEEIVRKVLL-TYYNSASFFTLYAGAGDGWSHEQLADAPA 690

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK 438
           P      D  ILS    +++ + + ++      A   + + + ++ + Y    +      
Sbjct: 691 PQDRPLLDRWILSELHSLIKTVDDALERFDTALAGRALTTFIDDLSNWYVRRSRRRFWAG 750

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-----CFQSLDQRL 493
                 +       E +  L +L+   VP + + ++  L   D         +   D+ L
Sbjct: 751 AGTPEGAAAFATLFECLETLTLLMAPIVPFITDHVWQALRRPDAPESVHLASWPKADESL 810



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  P + H    +  DV  RF  + G  V    G D HG  +  A +         
Sbjct: 54  PPTANGTPGVHHVEARVFKDVFPRFKTMKGFYVERKAGWDCHGLPVEVAVEKELGISGKK 113

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +N   F +M   +   ++ D+  RT ++ + ++     K+I
Sbjct: 114 DIEAFGIAEFNARCRESVLRNVDAFTEMTRRMGYWVNMDEAYRTMDREYVESVWWAIKQI 173

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG + +      Y  R     +D E+ +G +
Sbjct: 174 WDKGLLVQDYRISPYCPRCGTTLSDHELAQGYE 206


>gi|297619453|ref|YP_003707558.1| valyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378430|gb|ADI36585.1| valyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 907

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 147/400 (36%), Gaps = 24/400 (6%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +      K  I       W+    +      +          + +   ++W+E+ G+ 
Sbjct: 354 QNVGSCWRCKTPIEIIVGDQWFVNVTKMLEEAQKATNEIKWIPEHMKARLLKWIEDMGWD 413

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           + +S  +         + +    I    E        +     S  T   G K       
Sbjct: 414 WCISRQRLFATPIPVWYCKDCGEIIFAKE----EDLPIDPTKESPYTCKCGSKNLRAETD 469

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y    +  L+   
Sbjct: 470 VLDTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYTIIRSLALTNQK 528

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  +   +       G K+SKS GNV+ P E+  + G D+LR +       GKD  +   
Sbjct: 529 PWDEIAVNGMVFGEDGFKMSKSRGNVVAPSEITTKYGADSLRLW-ASNSILGKDVPFAWK 587

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDESILSVCSRV 397
            ++          + N    +   I  D    I +  A  E        D  ILS  +R+
Sbjct: 588 EVE--YGNRFLRKVWNASKFAKMNIGDDVIAEIKSKIAKNENIEIKNPVDLWILSKLNRL 645

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST----VLYVT 451
           ++E+ E+++    +  +A +   +     D Y +  K     K   + A+       Y  
Sbjct: 646 VKEVSEDLEGYKFN-CVADIQKFLWHEFCDNYIELVKHRLYNKEETEEAACEKFMAQYTL 704

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +VI +   +L  F P  A+ + +I  + D +  + +LD+
Sbjct: 705 YKVITECTKMLAPFTPHFADMVGEIYEIDDLHFIWATLDE 744



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GHA      D++ARF R+ G DV+F  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGKMHLGHALNWTYMDIIARFKRMTGYDVMFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                ++N    R+    L IS  +D    T    +    
Sbjct: 91  VEETHNITKSCVDRQEFRKMCVELTEENVEKMREQVRSLGISTDWDREYITMTPEYVKKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + ++ +KG IY+G +   +  R E
Sbjct: 151 QTAFLRMQEKGLIYRGKHPVNWCPRCE 177


>gi|326335982|ref|ZP_08202159.1| isoleucyl-tRNA synthetase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691946|gb|EGD33908.1| isoleucyl-tRNA synthetase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 1138

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 102/282 (36%), Gaps = 14/282 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y           K +PAD    G D     F+ ++
Sbjct: 599 KPMKRESDLIDVWFDSGSMPYAQVHYPFENKELIESRKAFPADFIAEGVDQTRGWFYTLH 658

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  ++     + +   +   G+K+SK LGN +DP E + + G DA R++++    
Sbjct: 659 AIATSVFDSVAYKNVMSNGLVLDKNGQKMSKRLGNAVDPFETLAKYGADATRWYMISNAN 718

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDES 389
              +  +D +G+++ V       + N  S     +  + DG              E D  
Sbjct: 719 PWDNLKFDVEGIEE-VRRKFFGTLYNTYSFFA--LYANLDGFTYAEAEVPLEKRPEIDRW 775

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV 447
           ILS    ++ +++E   +    RA   +   V E   + Y    +    K        + 
Sbjct: 776 ILSELHTLIAKVKEAFLDYEPTRATRLISDFVQENLSNWYVRLCRRRFWKGEYEQDKISA 835

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  +  +A L     P   ++++  L V       +S+
Sbjct: 836 YQTLYTCLEVVAKLSAPVTPFFMDRLYKDLNVVTGKDKAESV 877



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE           N  P I H     + D+  RFH   G  V    G D HG  +    
Sbjct: 37  GREPFIFYEGPPSANGLPGIHHVMARALKDIFCRFHTQMGKQVFRKAGWDTHGLPVELGV 96

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       K  V + +  + D+   +   +   +   T + ++ 
Sbjct: 97  EKELGITKDDIGKKISVADYNKACKEAVMRYTDIWNDLTKRIGYWVDLTNPYITYKPKYM 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +T   L K++ +K  +YKG     YS +     +  E+ +   
Sbjct: 157 ETVWWLLKQLYNKELLYKGYTIQPYSPKAGTGLSTHELNQPGC 199


>gi|300772039|ref|ZP_07081909.1| isoleucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760342|gb|EFK57168.1| isoleucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 1151

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 103/288 (35%), Gaps = 16/288 (5%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDI 267
           G K+  +P  ++ VW D+        G                     +PAD    G D 
Sbjct: 606 GQKLFREPD-LIDVWFDSGAMPYAQWGLDHDKLARGEEYPFKEGFESAFPADFIAEGVDQ 664

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F  ++  + +L  ++     V +   +   G K+SK LGN +DP   I+    DA 
Sbjct: 665 TRGWFFTLHAISTMLRKSVAFKNVVSNGLVLDKNGNKMSKRLGNGVDPFATIDHYSADAT 724

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT- 384
           R++++   A   +  ++ +GL +                ++   +  +    P       
Sbjct: 725 RWYMISNAAPWDNLKFNTEGLDEVRRKFFGTLYNTYAFFALYANIDKFAYTEPDIAIENR 784

Query: 385 -ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
            E D  I+S+ + + +E+ E   +    +A   + + V E   + Y    +    K    
Sbjct: 785 PEIDRWIISLLNSLTKEVDEYFADYEPTKAARAIQNFVDEHLSNWYVRLCRRRFWKGEYS 844

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +   +        +  +A L+    P  ++++F  L    +    +S+
Sbjct: 845 EDKISAYQTLYTCLNTIAKLMSPISPFFSDRLFLDLNEVTKKETVESV 892



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 19/143 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P I HA    I D+  R+  L G  V    G D HG  I  A + 
Sbjct: 52  KPYTFYEGPPSANGMPGIHHAMARSIKDIFCRYKTLKGYQVKRKGGWDTHGLPIELAVEK 111

Query: 65  AGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TTEKRHHDT 105
               TK  + +       N+   +++    D+  D  I+            T E  + +T
Sbjct: 112 TLGITKEDIGKKISVEEYNAACRKEVMKYTDVWNDLTIKMGYWVDLENPYITYENEYIET 171

Query: 106 CRILWKKISDKGDIYKGCYSGWY 128
              L K++  KG +YKG     Y
Sbjct: 172 LWYLLKELYKKGLLYKGYTIQPY 194


>gi|19113981|ref|NP_593069.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1351163|sp|Q09828|SYLM_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|1022354|emb|CAA91210.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 874

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 5/234 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI +   YP+   HIGH     I+D+L+R++R+ G  V+   G D  G     AA  
Sbjct: 58  KKKYILSMFPYPSGLLHIGHVRVYTISDILSRYYRMKGYKVIHPMGWDAFGLPAENAAIE 117

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G++   +  +N +  ++    ++I   +D  I T    ++   + L+ ++  KG  Y+ 
Sbjct: 118 NGISASSWTYENIKKMKEQTYHMNIYFDWDREISTCNPDYYKWSQYLFLQMFHKGLAYQA 177

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D     +++V               V+      +F ++S Y D+LL   E+
Sbjct: 178 EATVNWDPVDCTVLANEQVDSH---GRSWRSGAIVEKKNLRQWFLKISDYSDQLLDDLET 234

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
            P++   +++         +G +         +        P+ I+ V   AL+
Sbjct: 235 LPKWPDKVKKMQRNWIGRTTGFEISFPLLNDKETLTVFTTKPETIIDVSFIALS 288



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 67/185 (36%), Gaps = 26/185 (14%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           +K+SKS  N +DPI  I++ G D +R +++          ++++ +   KR    + N +
Sbjct: 627 QKMSKSKHNGVDPIRTIQKYGSDIIRAYIIFSAPVEGVLLWNENAIMGTKRWLTKIWNCV 686

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIRENMQN-QLIHRA 413
             L+ R   M               T  D      + S  +  + +   + +N   ++  
Sbjct: 687 HQLLEREKKM------SDAMRQTKLTIVDDHNSRKLESQYNEFISQCSAHYENVFSLNLV 740

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++  + L +               K N     T+       +  L   +   +P  +++ 
Sbjct: 741 ISDAMKLTNN----IADA-----LKNNKVNIGTIKA----SLEVLVKCIAPIIPCFSSEC 787

Query: 474 FDILF 478
           + +L 
Sbjct: 788 WLLLG 792


>gi|289427161|ref|ZP_06428877.1| leucine--tRNA ligase [Propionibacterium acnes J165]
 gi|289159630|gb|EFD07818.1| leucine--tRNA ligase [Propionibacterium acnes J165]
          Length = 826

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  VKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|167622893|ref|YP_001673187.1| valyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167352915|gb|ABZ75528.1| valyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 971

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 132/416 (31%), Gaps = 103/416 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   E+     +P +  N + +     ++D  +SR+   W
Sbjct: 374 IEPLLTDQWYVAVAPMAKTAMEAVENGDIKFVPQQYEN-MYNSWMRDIQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGKVYVGRDEAEVRAKHKLDDSVVLRQDADVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           +    KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 DTAELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPQLAAKIEKSTRKEFSDGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM------------- 368
            DALR+ L    + G+D  +D   L         N I N  SR V M             
Sbjct: 611 TDALRFTLASMASTGRDINWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQVEGASDDA 667

Query: 369 ILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           I +  D         P     + +D  I+ + +  ++   E+M N     A   +     
Sbjct: 668 IGEALDCGQILVDGKPGEMELSIADRWIIGLFNETVKAYDEHMANYRFDLAANTIYEFTW 727

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP  ++     +     +  V V+ Q+  L+   +P L   I+  
Sbjct: 728 NQFCDWYLELTKP-VMQSGTEAQLRGTRHTLVNVLEQMQRLMHPMMPYLTETIWKR 782



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +Q+          L   + +D    T ++  
Sbjct: 90  VERKVAAEEGLSRHDLGRENFIDRIWDWKEQSGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +        +D EV              P+
Sbjct: 150 SEAVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|32266432|ref|NP_860464.1| valyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81665926|sp|Q7VHN2|SYV_HELHP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|32262482|gb|AAP77530.1| valyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 899

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 136/400 (34%), Gaps = 66/400 (16%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           ++  +    E Y    G+ Y    N V+    + + F         +    +      P 
Sbjct: 339 QENGFVEKIEDYTNQVGKCYR-CGNIVEPYISKQW-FVKKETAHNAIQRVNNGELHFYPA 396

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDP------------------------ 224
           +  N   +     LKD  +SR+   WG  I +                            
Sbjct: 397 QWLNN-YNAWMRELKDWCISRQ-LWWGHRIPVWYCECGNKVASESDNPICPQCQSTITKQ 454

Query: 225 -QYIMYVWIDALTNYLTTTGYLD---------NPDGSKAKFWPADLHVIGKDILRFH--A 272
            + ++  W  +     +T G+ +               A+F+P  L + G DIL F    
Sbjct: 455 DEDVLDTWFSSGLWAFSTLGWGNEDTNTQPPLYHANDLAEFYPNSLLITGFDILFFWVAR 514

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +      L  +LP              G+K+SKS GN+IDP+E+I   G D LR+ L   
Sbjct: 515 MILSGESLLDSLPFKDVYLHALVRDENGQKMSKSKGNIIDPMEIISSYGADTLRFTLAIL 574

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--------- 383
            A G+D       L+   N    N + N  +  ++M L+   G       F         
Sbjct: 575 CAQGRDVKLSTQSLEISKN--FTNKLYN-ATNFLNMYLEQLGGKEALKKGFGDINHIHIN 631

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           T   + +L        E+R  ++N   +   + +   +     D   +      L K + 
Sbjct: 632 TPLGQYMLVRFYTATNEVRAALENYRFNDGASILYRFLWGEFCDWGIE------LAKASK 685

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           D     +Y    + +   ILL  ++P + + ++  L  +D
Sbjct: 686 DS----IYELGAIFKAALILLHPYMPFITDALWHTLNASD 721



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 22/164 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             I           HIGHA    + D++ RF R++G   L+  G D  G           
Sbjct: 51  FSIMMPPPNVTGVLHIGHALTFTLQDIITRFKRMEGFKTLYQPGLDHAGIATQNVVLKQL 110

Query: 60  --KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTC 106
             +      +  + F+ +                R +      S   F  T +K      
Sbjct: 111 LAQGITKESLGREAFIAKVWEWKEQSGGEILNQMRHLGITPAWSRLRF--TMDKGLQKAV 168

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
           +  + +  ++G I +  Y   + + D A  + +  Y+   G+ Y
Sbjct: 169 KKAFVQWYNQGLIVQDNYMVNWCVNDGALSDIEVEYEQNHGKLY 212


>gi|269837467|ref|YP_003319695.1| leucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786730|gb|ACZ38873.1| leucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 824

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 6/195 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K Y  T   YP+   HIGH Y M  +D  ARF R+ G +VLF  G D  G     AA
Sbjct: 39  NRPKWYHLTMYPYPSGDLHIGHWYAMAPSDAAARFKRMSGYNVLFPMGFDAFGLPAENAA 98

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    R     +   +D    + T    ++   +  + +    G  Y
Sbjct: 99  ITRGIHPFKWTMDNIERMRRQLRSMGAMFDWSREVVTCLPDYYRWNQWFFLQFYKNGLAY 158

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +     W+  +D+    +++V  G            V   + E +FFR++ Y ++LL++ 
Sbjct: 159 RASAPVWWCPKDQTVLANEQVIDG----RCERCGTEVYRRDLEQWFFRITKYAEELLNFD 214

Query: 181 ESHPEFILPIERRNE 195
                  +   +RN 
Sbjct: 215 GIEWPERVMTMQRNW 229



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 34/258 (13%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
           A + P D +  G +    H +Y   F         L  + P  +       +    EK+S
Sbjct: 532 AYWTPVDQYTGGIEHATMHLMYARFFTKALRDLGLLPFDEPFLRLFNQGIILGEDNEKMS 591

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+DP +++ ++G D +R +L+      + G +   G+          G+   V R
Sbjct: 592 KSRGNVVDPDDLVAQLGADTVRLYLMFIAPWEQGGPWSSRGI---------AGVERFVRR 642

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +++ +  D   P  G   E+   +  +  R ++ + E++     +  +A+++  V+E+
Sbjct: 643 VWTIVTETAD--TPADGPDGEAAHKLRKITHRTIKAVTEDISTFQFNTMVARLMEFVNEL 700

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
                      L+ T   R         E +R L +LL    P LA ++++ L       
Sbjct: 701 S---------SLRDTEVVRTEA----WREAMRTLVLLLAPSTPYLAEELWERLGQPYSVH 747

Query: 483 NRCFQSLDQRLKPGFMLH 500
            + +   D  L    M+ 
Sbjct: 748 QQSWPQYDPELAAAEMIE 765


>gi|315230480|ref|YP_004070916.1| valyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183508|gb|ADT83693.1| valyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 887

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/461 (16%), Positives = 155/461 (33%), Gaps = 24/461 (5%)

Query: 23  GHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD 82
           G  Y     D      +    ++      DE+G+    A +  G+ T+            
Sbjct: 263 GAVYNCTYGDEQDIVWQKR-YNLPVIIAIDEYGRMTEVAGKYKGMKTEEA----REAIAK 317

Query: 83  MADVLDISYDDF-IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + + + Y    IR    R              +    K  +       +E      ++
Sbjct: 318 DLEEMGLLYKKEKIR---HRVLRHTERSSCMAPIELLPKKQWFIKVKEFTEELVEVARQI 374

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
               +  +   + +  + M+ +    R   +   +  +       I+P    +  +    
Sbjct: 375 RWFPEDMFLRLK-DWAESMDWDWVISRQRVFGTPIPFWVCKDCGHIIPAREEDLPVDPRF 433

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                          G    +  + ++  WID+    L  T +  +    K   +P  L 
Sbjct: 434 DKPPVEKC----PKCGSANLEGVRDVLDCWIDSSITPLVITKWTKDEKWFK-HNFPTALR 488

Query: 262 VIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
             G DI+R  A Y  +  ++L+   P    + +       G K+SKS GNV+ P EVI +
Sbjct: 489 PQGTDIIRTWAFYTIFRTYILTGQKPWHDILINGMVAGPDGRKMSKSYGNVVSPEEVIPK 548

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR +       G+D  +  + +    N      + N + R     +KD D     
Sbjct: 549 YGADALRLWTALA-PPGEDHPFKWETVD--YNFRFLQKLWN-IFRFAERHIKDLDYNANK 604

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
                  D  ILS   R+++     M+    +    ++++ +     D Y +  K   L 
Sbjct: 605 NIKLEPLDRWILSRLHRLIKFATNEMEIYRFNLLTRELMTFIWHEVADDYLEMIKH-RLY 663

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +          E++  + +LL  FVP +  +++  +F
Sbjct: 664 GEDKESKLKARVALYELLYNILLLLAPFVPHITEELYQEVF 704



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I T   + +   H+GH       D++AR+ R+ G +VLF  G D HG      
Sbjct: 31  EKKPPYAIDTPPPFTSGTLHLGHVLSHTWIDIVARYKRMRGYNVLFPQGFDNHGLPTELK 90

Query: 62  AQNA-----------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRI 108
            +                   +  Q     R+    +  S  +D    T +  +    + 
Sbjct: 91  VEKEFGISKDEPEKFLQKCIEWTWQAIEAMRNQFIRIGYSADWDLEYHTMDDEYKALVQK 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +   KG +Y+  +  ++           EV  
Sbjct: 151 SLLEFYKKGLLYQAEHPVFWCPNCRTSLAKAEVGY 185


>gi|33865789|ref|NP_897348.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|48428528|sp|Q7U6T1|SYL_SYNPX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33632959|emb|CAE07770.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 857

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +  Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 30  EDGKGFYALSMFPYPSGTLHMGHVRNYVITDVIARVQRMRGHSVLHPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    + D+N    R   D L   I +D    T    ++   + L+ ++ D G  
Sbjct: 90  AIERNVDPGDWTDRNIDQMRSQLDRLGLSIDWDREQATCHSDYYRWTQWLFLELFDGGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ADG+ + +    V+  +   +F R++ Y + LL+ 
Sbjct: 150 YRKNATVNWDPVDQTVLANEQV--DADGRSWRSGA-LVEQRQLNQWFLRITQYAEALLND 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 207 LDQLSGWPERVRTMQANWIGRSEG 230



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 19/205 (9%)

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           + A    ++   P    S   +    EK+SKS  N +DP  VI+  G D  R F++ +  
Sbjct: 589 YVASADVSDPETPTDPTSGEPLEVLFEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAP 648

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             KD  +D   ++ +        I  LV  + S I        P P    ++D  +    
Sbjct: 649 PEKDLEWDDSDVEGQFR--FLQRIWRLVESADSRIDSLEPEERPEP--LADTDAKVRRAI 704

Query: 395 SRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  + E++     ++ A+++++ L + +              T+   A     V  E
Sbjct: 705 HIAIDAVSEDLQDEIQLNTAISELMKLTNAI--------------TSVGVAELSTSVLKE 750

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
            +  L  LL  F P LA +++  L 
Sbjct: 751 ALSTLLRLLAPFAPHLAEELWHQLG 775


>gi|157960729|ref|YP_001500763.1| valyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157845729|gb|ABV86228.1| valyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 971

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 133/417 (31%), Gaps = 103/417 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   E+     +P +  N + +     ++D  +SR+   W
Sbjct: 374 IEPLLTDQWYVAVAPMAKTAMEAVENGDIKFVPQQYEN-MYNSWMRDIQDWCISRQ-LWW 431

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ +
Sbjct: 432 GHRIPAWYDEAGKVYVGRDEAEVRAKHKLDDSVVLRQDADVLDTWFSSALWTFSTLGWPE 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           +    KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 DTAELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIDLESLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEPHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM------------- 368
            DALR+ L    + G+D  +D   L         N I N  SR V M             
Sbjct: 611 TDALRFTLASMASTGRDINWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQAEGASDDA 667

Query: 369 ILKDYDGMI------PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           I +  D         P     + +D  I+ + +  ++   E+M N     A   +     
Sbjct: 668 IGEALDCGQLLVDGKPGAMELSIADRWIIGLFNETVKSFDEHMANYRFDLAANTIYEFTW 727

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +  KP     T+  +     +  V V+ Q+  L+   +P L   I+  +
Sbjct: 728 NQFCDWYLELTKPVMQSGTD-AQLRGTRHTLVTVLEQMQRLMHPIMPYLTETIWQRI 783



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +Q+          L   + +D    T ++  
Sbjct: 90  VERKVAAEEGLSRHDLGRENFIDRIWDWKEQSGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            D  + ++ ++ +   IY+G     +        +D EV              P+
Sbjct: 150 SDAVQEVFVRLYEDDLIYRGKRLVNWDPTLHTAISDLEVENKEKQGSMWHFRYPL 204


>gi|307693305|ref|ZP_07635542.1| leucyl-tRNA synthetase [Ruminococcaceae bacterium D16]
          Length = 807

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +++K Y      YP+ Q  H+GHA      DV+AR  R+DG +VLF  G D  G     
Sbjct: 29  TDKKKFYALVEFPYPSGQGLHVGHARPYTAMDVVARKRRMDGYNVLFPMGYDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +        N  NFR    +L  S+  D  + TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNHIHPAKVTHDNILNFRKQLQMLGYSFDWDREVNTTDPSYYKWTQWIFLQLYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV +G           PV   E+  +  +++ Y  +L+ 
Sbjct: 149 AYKTTMPVNWCTSCKCVLANEEVVEG----VCERCGAPVIRKEKSQWMLKITEYAQRLID 204

Query: 179 YYESHPEFILPIERRNEVI 197
             +          ++   I
Sbjct: 205 DLDDLDFIERVKIQQKNWI 223



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/347 (15%), Positives = 114/347 (32%), Gaps = 61/347 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +           PI            E       G   LS   
Sbjct: 416 YKLRDWVFSRQRYWGEPIPMVYCEKCGWQPISEDQLPLLLPDVESYEPTDDGESPLSKMT 475

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y+               +W P D +  
Sbjct: 476 DWVNTTCPCCGGPAKRETDTMPQWAGSSWYFLRYMDPHNDKALASKEALDYWSPVDWYNG 535

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +   GEK+SKS GNV++P +
Sbjct: 536 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYQKRTSHGMILGEGGEKMSKSRGNVVNPND 595

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VIE+ G D +R +++      K   +  +G+K         G    + R  ++  +    
Sbjct: 596 VIEQYGADTMRTYIMFIGDFEKAAAWSDNGVK---------GCKRFLDRVWNLATE---- 642

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
              T   +++ +E       R ++++ E+++    + A+A +++LV+  D Y        
Sbjct: 643 QEHTGDEYSQVNE---VAVHRAIKKVSEDIEAMKFNTAIATLMALVN--DFY-------- 689

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                          +   ++ L ++L  F P +  +++++     +
Sbjct: 690 -----------ANGASRGDMKALLLMLSPFAPHMCEELWEMAGYGGQ 725


>gi|146298467|ref|YP_001193058.1| isoleucyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146152885|gb|ABQ03739.1| isoleucyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 1133

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 106/298 (35%), Gaps = 13/298 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           K +PA+    G D     F+ ++
Sbjct: 595 KPMKRESDLIDVWFDSGAMPYAQWHYPFENKEKIDDNKDFPANFIAEGVDQTRGWFYTLH 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               L+   +     V +   +   G K+SKS GN IDP + I E G DA R++++    
Sbjct: 655 AIGTLVFDKVAYKNVVSNGLVLDKNGIKMSKSKGNTIDPFKTIAENGPDATRWYMIMNAN 714

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D +G+ + V       + N  S        D   Y+          E D+ I+
Sbjct: 715 PWDNLKFDLEGIAE-VKRKFFGTLYNTYSFFSLYANIDGFKYEEAEIPLNERPEIDQWII 773

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           S    +++ + E  ++    +A   +   V E   + Y    +    K            
Sbjct: 774 SELHSLIKFVDECYEDYEPTKATRAISDFVQENLSNWYVRLCRRRFWKGEYAKDKIAAYQ 833

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM---LHKTFD 504
                +  ++ L     P   +K++  L  +  +  F S+     P F+   ++KT +
Sbjct: 834 TLYTCLLTISKLSAPVAPFFMDKLYRDLTTSTGSEDFASVHLAEFPKFVENFVNKTLE 891



 Score = 60.2 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P I H     I D+  R+    G  V    G D HG  +    + 
Sbjct: 41  EPFVFFEGPPSANGLPGIHHVMARAIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELGTEK 100

Query: 65  AGVTTKV-----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK                   V + +  + D+ + +   +  DD   T + ++ ++
Sbjct: 101 ELGITKEDIGKTISIEEYNEACKKTVMRYTDVWNDLTEKMGYWVDMDDPYVTYKPKYMES 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              L K+I DKG +YKG     YS +     +  EV +
Sbjct: 161 VWWLLKQIYDKGLLYKGYTIQPYSPKAGTGLSSHEVNQ 198


>gi|167947058|ref|ZP_02534132.1| Methionyl-tRNA synthetase, class Ia [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 367

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 128/368 (34%), Gaps = 33/368 (8%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
            N   HIGH  E I  D+ ARF ++ G    +    D HG  I   A+  G+  +  + +
Sbjct: 1   ANGPIHIGHLVEYIQTDIWARFQKMRGHQCHYVCADDAHGTPIMLRARQEGIEPEALIAR 60

Query: 76  NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
            S   +       I +D++  T  + + +  + ++++  D G I K   +  Y   +  +
Sbjct: 61  VSEEHQADFAAFRIGFDNYHSTHSEENRELSKTIYERNRDAGHIAKRMITQAYDPVETMF 120

Query: 136 YNDD-----------EVYKGADGQYYNAQHNPVQW--------------MEEEGYFFRLS 170
             D            E   G + +   A ++P +                E + YFF+L+
Sbjct: 121 LPDRFIKGTCPKCGAEDQYGDNCEICGASYSPAELKDPVSAVSGAKPEERESDHYFFKLA 180

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD------LSLSRKTFDWGIKIPDDP 224
            ++  L  ++   P      ++   V+    +G+        L          + +    
Sbjct: 181 NFEAMLKQWHPCRPPAAGDGQQARRVVRVWPAGVGHLPRRPLLRFRDPRPSRQVFLCLCS 240

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
            +    W+ + T+     G+     G       +                          
Sbjct: 241 THQSATWLASRTSVNAPRGWRSTTTGRPTPTPRSITSSARTSSTSTACS-GRQCWRGPGF 299

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDK 343
             P  VF+HGF+   G+K+SKS G  I     ++ +  + LRY+   ++     D   + 
Sbjct: 300 RKPTAVFAHGFLTVDGQKMSKSRGTFIKARTYLDHLNPEYLRYYFAAKLGAGVDDIDLNL 359

Query: 344 DGLKKRVN 351
               +RVN
Sbjct: 360 KDFAQRVN 367


>gi|17065234|gb|AAL32771.1| similar to valyl tRNA synthetase [Arabidopsis thaliana]
 gi|38564252|gb|AAR23705.1| At1g14610 [Arabidopsis thaliana]
          Length = 1064

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 138/431 (32%), Gaps = 64/431 (14%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +        ++ + Y N   + K A       ++  ++++ ++         +
Sbjct: 447 MRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRRWLE 506

Query: 174 DKLLSYYESHPEF--ILPIER--------------RNEVISFVKSGLKDLSLSRKTFDWG 217
           +           +   +P                  +  +            ++K     
Sbjct: 507 NIRDWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKK 566

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            ++  DP  ++  W  +    L+  G+ D  D  KA F+P  +   G DIL F    +  
Sbjct: 567 FELTRDPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETGHDILFFWVARMVM 624

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L   +P  K  F        G K+SKSLGNVIDP+EVI  V ++ L   L      
Sbjct: 625 MGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLD 684

Query: 336 GKDGFYDKDGLKK--------------------------RVNADL-----ANGIGNLVSR 364
            K+    K+G  K                          ++N D+          N +  
Sbjct: 685 PKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWN 744

Query: 365 SVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +V   +         P   +        + ILSV ++ + +   ++       A   + +
Sbjct: 745 AVRFAMMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAISKTVVSLDAFEFSDAANTIYA 804

Query: 420 LVS--EVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                  D Y +A KP      NP    +RA     + +  +     LL  F+P +  ++
Sbjct: 805 WWQYQFCDVYIEAIKP-YFAGDNPTFASERAHAQHALWI-SLETGLRLLHPFMPFVTEEL 862

Query: 474 FDILFVADENR 484
           +  L    +  
Sbjct: 863 WQRLPAPKDTE 873



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA    I D + R+ R+ G + L+  G D  G      
Sbjct: 121 SSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGVDHAGIATQVV 180

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + +Q           L  S D      T +++ 
Sbjct: 181 VEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSRECFTMDEQR 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++  +G IY+      +  
Sbjct: 241 SKAVTEAFVRLYKEGLIYRDIRLVNWDC 268


>gi|308183700|ref|YP_003927827.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065885|gb|ADO07777.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 806

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVING----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKNCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKNGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDSALEGAHR--FIKRLYDKANAITPTTSKPEFKGVGLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ +                   A +   +  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALS------------------AQSNEQILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILF 478
           L+  +P  A ++ + LF
Sbjct: 712 LEPIIPHTAWELSERLF 728


>gi|283458153|ref|YP_003362769.1| leucyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134184|dbj|BAI64949.1| leucyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 831

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 6/186 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+   H+GHA    I D+ AR+ +  G DVL   G D  G     AA 
Sbjct: 41  KGRKYVLDMFPYPSGDLHMGHAEAFAIGDMNARYFKQCGYDVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 K +  +N     +      I   +   + T++  ++   + L+++   KG  Y+
Sbjct: 101 KNDTHPKEWTYKNIETQAESFKRYAIAADWSRRLHTSDPEYYKWTQWLFEQFYKKGLAYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +D+    +++V  GA           V       ++F+++ Y  +LL   E
Sbjct: 161 KDSMVNWCPKDQTVLANEQVVNGA----CERCGTTVTKKSLNQWYFKITDYAQQLLDDME 216

Query: 182 SHPEFI 187
                 
Sbjct: 217 QLEGKW 222



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 90/257 (35%), Gaps = 35/257 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
            +     +        D    S+      D++V G +    H +Y   F         + 
Sbjct: 520 WYFLRYVSPNYDKAPFDPQAMSEWGA--VDMYVGGVEHAILHLLYARFFTKVVRDLGLIK 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K + + G +L+ G+ +SKSLGN ++  E +++ GVDA+R  ++       D   
Sbjct: 578 HDEPF-KALMNQGQVLNGGKAMSKSLGNGVNLGEQLDKFGVDAIRTTMIFASPPEDDV-- 634

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D   +    +         +            D         T  D  +  + +R + E+
Sbjct: 635 DWADVSPSGSQKFLARAWRVAQ----------DVTSEPGVDATTGDLELQKLIARTVHEV 684

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +  + N   +  +A+ + LV+   +  D+             A        +    +AIL
Sbjct: 685 QGLLDNGKFNVVVAKTMELVNATRKAIDS------------GAGAADPAVRKAAETIAIL 732

Query: 462 LQAFVPKLANKIFDILF 478
           L  + P  A  ++  L 
Sbjct: 733 LSLYAPYTAEDVWHALG 749


>gi|257457671|ref|ZP_05622838.1| isoleucine-tRNA ligase [Treponema vincentii ATCC 35580]
 gi|257445057|gb|EEV20133.1| isoleucine-tRNA ligase [Treponema vincentii ATCC 35580]
          Length = 1101

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 71/486 (14%), Positives = 149/486 (30%), Gaps = 46/486 (9%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS---RNFRDMADVLDI--SYDDF 94
             G  V      D   +  A+     G   K          +  R +     I  +Y   
Sbjct: 367 FKGSGVPMICPVDAECKFTAEVPDYQGRFVKDTDKDIMDRLKAERKLVKRDQILHAYPHC 426

Query: 95  IRTTEKRHHDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            R +    +      +  +                    +++  +    E  +       
Sbjct: 427 WRCSSPLIYRAVSSWFVSVEKVKGAMLRANSKINWQPSHIKEGRFGKWLEGARDWAISRN 486

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
               NP+   +                          L            K  +  +++ 
Sbjct: 487 RYWGNPLPIWKCTNPDCE---------EAICVGSRDELKTLSGVYPDDLHKHFIDSITIP 537

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G  +   P+ ++  W ++ +       Y           +PA     G D    
Sbjct: 538 CKN--CGGTMHRVPE-VLDCWFESGSMPYAQQHYPFENKKYFEDHFPAHFISEGLDQTRG 594

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+ +   A  L         + +   +   G+K+SKSL N  DP EV+ + G DALR F
Sbjct: 595 WFYTLTVLAAALFDRPAFKNCIVNGLVLASDGKKMSKSLRNYTDPNEVVGQFGADALRLF 654

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---- 383
           L+       +D  Y  +G++  +   L        S S  +   + DG+ P   A     
Sbjct: 655 LMHSNVVKAEDLKYSDEGVRDVLKGILIPLWN---SYSFYVTYANIDGVTPPAHAKLDGA 711

Query: 384 ------------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
                          D  ILSV  +++ ++   + +  + +A+  +++ + +++ ++  +
Sbjct: 712 DAHIGAFVKELNNPLDRWILSVTEKLVLDVTAALDDYDLSKAIDPIVAYIEQLNNWYIRR 771

Query: 432 KPWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                 K+  + D+           +++ A++    VP +   I+  L  AD+       
Sbjct: 772 SRRRFWKSENDGDKVQA-YETLYRALKKFALVAAPVVPFITESIWQNLRTADDPVSVHLA 830

Query: 490 DQRLKP 495
           D  +  
Sbjct: 831 DYPIYA 836



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFVPSTIKDIIPRYQTMKGKKVERRFGWDCHGLPVENLIEKELGLNSKT 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +  + +R   + L   + +D+  +T E  + ++   + K++
Sbjct: 107 DIEKYGIAKFNEACRASVLRYVKEWRHTINRLGRWVDFDNDYKTMEPAYMESIWWVMKQL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            DKG +Y+G Y   Y  R     ++ E+  G
Sbjct: 167 WDKGLLYEGHYILPYCPRCSTVLSNHELNLG 197


>gi|255327531|ref|ZP_05368598.1| leucine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295425|gb|EET74775.1| leucine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 831

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 6/186 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + + Y+     YP+   H+GHA    I D+ AR+ +  G DVL   G D  G     AA 
Sbjct: 41  KGRKYVLDMFPYPSGDLHMGHAEAFAIGDMNARYFKQCGYDVLHPIGWDSFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 K +  +N     +      I   +   + T++  ++   + L+++   KG  Y+
Sbjct: 101 KNDTHPKEWTYKNIETQAESFKRYAIAADWSRRLHTSDPEYYKWTQWLFEQFYKKGLAYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +D+    +++V  GA           V       ++F+++ Y  +LL   E
Sbjct: 161 KDSMVNWCPKDQTVLANEQVVNGA----CERCGTTVTKKSLNQWYFKITDYAQQLLDDME 216

Query: 182 SHPEFI 187
                 
Sbjct: 217 QLEGKW 222



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 91/257 (35%), Gaps = 35/257 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
            +     +     G  D    S+      D++V G +    H +Y   F         + 
Sbjct: 520 WYFLRYVSPNFDEGPFDPQAMSEWGA--VDMYVGGVEHAILHLLYARFFTKVVRDLGLIK 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K + + G +L+ G+ +SKSLGN ++  E +++ GVDA+R  ++       D   
Sbjct: 578 HDEPF-KALMNQGQVLNGGKAMSKSLGNGVNLGEQLDKFGVDAIRTTMIFASPPEDDV-- 634

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D   +    +         +            D         T  D  +  + +R + E+
Sbjct: 635 DWADVSPSGSQKFLARAWRVAQ----------DVTSEPGVDATTGDLELQKLIARTVHEV 684

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +  + N   +  +A+ + LV+   +  D+             A        +    +AIL
Sbjct: 685 QGLLDNGKFNVVVAKTMELVNATRKAIDS------------GAGAADPAVRKAAETVAIL 732

Query: 462 LQAFVPKLANKIFDILF 478
           L  + P  A  ++  L 
Sbjct: 733 LSLYAPYTAEDMWHALG 749


>gi|222529340|ref|YP_002573222.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782359|sp|B9MRZ5|SYI_ANATD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222456187|gb|ACM60449.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 920

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 23/305 (7%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G    +    IM VW D+ +++             +   WP D+++ G D     F
Sbjct: 516 CPVCGCSEFEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    A       P    +     +  +G+K+SKS GNVI P ++I E G D LR + V
Sbjct: 570 QSSLLTAVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCV 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDE 388
                  D    KD +K+    ++   I N   R +   L D++      G     E D+
Sbjct: 630 SADYTT-DMRISKDIIKQL--TEIYRKIRNTA-RFLLGNLYDFNPKTDKVGYENLKEIDK 685

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRAS 445
             L    ++++++ +  +    ++    V +   +   + Y D  K      K+      
Sbjct: 686 WALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRR 745

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFML 499
           +   V  E++  L IL+   +   A +I+  +   +E+        + S+++ +     L
Sbjct: 746 SAQTVMYEILIALTILIAPILSFTAEEIWQNIIFKEEDAESVFLTRWPSINEDILRDEAL 805

Query: 500 HKTFD 504
            + +D
Sbjct: 806 REKWD 810



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R     L +   +++   T + +     
Sbjct: 105 VIKKLEVNRHEVDPVEFRKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTY 207


>gi|156546787|ref|XP_001605772.1| PREDICTED: similar to leucyl-tRNA synthetase [Nasonia vitripennis]
          Length = 965

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 8/207 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK Y+ +   YP+   H+GH     I+D +ARFHR++G +V+   G D  G     A
Sbjct: 145 ESKEKYYVLSMFPYPSGSLHMGHVRVYTISDSVARFHRMNGKNVIHPMGWDAFGLPAENA 204

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A+   V    +   N  N R+    L  ++D      T +  ++   + L+ K+ + G +
Sbjct: 205 ARERQVDPAKWTQLNIENMREQLLRLGCTFDTHSEFATCDPEYYRWTQELFLKLYENGLL 264

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    D++V    +          ++      +F R + + + LL  
Sbjct: 265 YQRETYVNWDPIDQTVLADEQV---DENNRSWRSGAIIEKRLLRQWFVRTTVFAESLLEG 321

Query: 180 YESHPEFILPIERRNEVISFVKSGLKD 206
            +      L   R    I     G   
Sbjct: 322 LKDKT---LKEWRDIIKIQEHWIGQCT 345



 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 75/186 (40%), Gaps = 17/186 (9%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +H  ++   EK+SKS  N +DP E+  E   D +R  ++ ++A      + +D     +N
Sbjct: 677 THLPVVTNWEKMSKSKYNGVDPSEMFSEYSTDTIRLLILGDVAPTSHRNWSQDTFPGILN 736

Query: 352 --ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQ 408
               L   I   ++    +  +D   +      F + D+ +    +  +  +  N+   Q
Sbjct: 737 WQRRLWQTISEFIAARKELSPEDL-KIHHNDEKFVKEDDYMFDSRNYYVHGVTFNITGAQ 795

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            +  A++++  L + + +   + K    +    +RA  V            I+L    P 
Sbjct: 796 QLSVAISKMQGLTNSIRK---SSKLCVARSREYERALAVQ----------IIMLAPLAPH 842

Query: 469 LANKIF 474
            A++++
Sbjct: 843 FASELW 848


>gi|332045107|gb|EGI81300.1| isoleucyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 1134

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 8/271 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           ++ VW D+ +       Y         + K +PAD    G D     F+ ++    ++  
Sbjct: 603 LIDVWFDSGSMPYAQWHYPFENKEKIDENKSFPADFIAEGVDQTRGWFYTLHAIGTMVFD 662

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++     V +   +   G+K+SK LGN  DP E ++  G DA R++++       +  +D
Sbjct: 663 SVAYKNVVSNGLVLDKNGQKMSKRLGNATDPFETLDTYGADATRWYMIANANPWDNLKFD 722

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
            DG+++                S+   +  +             E D  ILS    ++Q+
Sbjct: 723 LDGIEEVKRKFFGTLYNTYSFFSLYTNIDKFSYAEDDIALNERPELDRWILSELHTLIQK 782

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + E        +A   + +   +   + Y    +    K        +        +  +
Sbjct: 783 VDEYYAEYEPTKAARAISNFTQDYLSNWYVRLSRRRFWKGDYQQDKISAYQTLYTCMLTI 842

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
           A L     P   +K++  L  A     F+S+
Sbjct: 843 AKLGAPIAPFFMDKLYLDLTKATHTESFESI 873



 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  E           N  P + H     I D+  R+  + G  V    G D HG  I   
Sbjct: 38  ENAEPYVFFEGPPSANGLPGVHHVLARAIKDIFPRYKTMKGYQVKRKAGWDTHGLPIELG 97

Query: 62  AQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTTEKRH 102
            +     TK  + +       N+   + +    D            +  DD   T E ++
Sbjct: 98  VEKELGITKEDIGKTISVEDYNAACRKAVMRYTDVWNNLTQKMGYWVDMDDPYITYEPKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++   L K+I  K  +YKG     YS +     +  EV +
Sbjct: 158 MESVWWLLKEIYSKNLMYKGYTIQPYSPKAGTGLSSHEVNQ 198


>gi|315105531|gb|EFT77507.1| leucyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 826

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPIDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGHKEPVRVFTTRPDTL 260



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 110/301 (36%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLYDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +                 R  + +  D D
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQR----AWRVAAEVTSDPD 657

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 658 ------ADLTQGDSALRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|29654136|ref|NP_819828.1| valyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81629179|sp|Q83DD0|SYV_COXBU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29541402|gb|AAO90342.1| valyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 920

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 138/395 (34%), Gaps = 86/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++ A     +   ES     +P       + ++   ++D  +SR+   W
Sbjct: 348 IEPLLTDQWFIKMEALAKPAMEAVESGELKFIPKNWEKTYLQWLS-NIQDWCISRQ-LWW 405

Query: 217 GI--KIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G    +  D +                             ++  W  A      T G+ +
Sbjct: 406 GHRLPVWYDEEKNSYVGRSREEILKKYHLSPDVKLQQETDVLDTWFSASLWPFATLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KG 300
             +  K  F+P  + V G DI+ F    W A ++   L L  K+  H   +H      +G
Sbjct: 466 KTESFKT-FYPTQVLVTGFDIIFF----WVARMVMMGLKLTHKIPFHSVYIHGLIRDSQG 520

Query: 301 EKISKSLGNVIDPIEVIEE-------------------------------------VGVD 323
            K+SKS GNVIDPI++I+                                       G D
Sbjct: 521 RKMSKSKGNVIDPIDIIDGISLDALIEKRTHALLQPKMAKTIEKMTRKEFPNGIASFGTD 580

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+      + G+D  +D   +      +  N I N  +R V+M  ++ D     P ++
Sbjct: 581 ALRFTFCALASRGRDINFDMGRIDG--YRNFCNKIWN-AARFVTMNTQEKDLNPEKPLSY 637

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT-N 440
           + +DE I +   + ++   E +           +         D Y +  K     K   
Sbjct: 638 SAADEWIRTRLQQTIKNAEEALSQYRFDLLAQTLYEFTWNEYCDWYVEFAKCILYDKQAK 697

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        +EV+  L  LL   +P +  +I+ 
Sbjct: 698 PAQLRGTRVALLEVLEILLRLLHPVMPFITEEIWQ 732



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GH ++  + D L R+HR+ G   L+  GTD  G       +    
Sbjct: 34  CIMLPPPNVTGTLHMGHGFQQTLMDTLIRYHRMKGERTLWQGGTDHAGIATQMVVEQQLA 93

Query: 68  TT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      + F+ +                R +   +D S + F  + ++       
Sbjct: 94  QEDLTREDLGRQAFIKRVWEWRERSGGKITHQMRRLGVSIDWSRERF--SMDEGLSRATT 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  +G IY+G     +  +     +D EV       +      P+
Sbjct: 152 EAFIRLHHEGLIYRGKRLVNWDPKLNTAISDLEVVTEEVEGHLWHIRYPL 201


>gi|315101253|gb|EFT73229.1| leucyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
          Length = 826

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATIHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPVSTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|289425157|ref|ZP_06426934.1| leucine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154135|gb|EFD02823.1| leucine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 826

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWTPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|328955636|ref|YP_004372969.1| leucyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455960|gb|AEB07154.1| leucyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 860

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 80/202 (39%), Gaps = 6/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+   H+GH     I D +AR  R+ G DVL   G D  G     AA 
Sbjct: 41  RPKRYVLEMFPYPSGDLHMGHVRNYTIGDAMARAARMRGFDVLHPIGFDAFGLPAENAAI 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +  +N          +  SY  D   +T    ++   + +++K+ ++G +Y+
Sbjct: 101 KHRTQAAAWTYRNMECALATMRRMGFSYDMDRLQQTCSPEYYRWGQWIFEKLWERGLVYR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G          +  +  + E ++FR++ Y D+LL+  +
Sbjct: 161 KKSPVNWCPGCKTVLANEQVVNG----RCWRCDSLPERRDLEQWYFRITEYADELLADLD 216

Query: 182 SHPEFILPIERRNEVISFVKSG 203
             P +   +++          G
Sbjct: 217 KLPGWPERVKQMQANWIGRSEG 238



 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 91/283 (32%), Gaps = 29/283 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y            + A  W P D +V G +    H +Y   F   
Sbjct: 525 DTMDTFTCSSWYYLRYCDPHNTDLPFSRAAASRWMPVDNYVGGIEHAILHLLYSRFFTKA 584

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                 L  + P    +         GE +SKS+GNVI P  VIE  G D LR  ++   
Sbjct: 585 LRDIGLLDIDEPFENLLTQGMVKDEHGEVMSKSVGNVIAPATVIEPYGADTLRLAILFIA 644

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              KD  +  D                +V R      +D      +    +  D++ L++
Sbjct: 645 PSEKD--FSWDANAVEGANRFLRRAWRVVWRLSRDAGEDALSATCSSLDKSSLDDAALAL 702

Query: 394 C---SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
                R + +   +      + A++ V+ LV            W   K   D       +
Sbjct: 703 LRERHRAIAKCTADFDRHQFNTAISAVMELVRAASA-------WVGSKGRRD-----PAL 750

Query: 451 TVEVIRQLAILLQAFVPKLANKIF-DILFVADE--NRCFQSLD 490
              +   +  +L    P  A++++ + L  A +  +  + + D
Sbjct: 751 CGLIATDIVSVLAPICPFWADELWHEALGHAADVYSAPWPAFD 793


>gi|314923144|gb|EFS86975.1| leucyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 826

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPIDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGHKEPVRVFTTRPDTL 260



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 110/301 (36%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLYDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +                 R  + +  D D
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQR----AWRVAAEVTSDPD 657

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 658 ------ADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|255534346|ref|YP_003094717.1| isoleucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340542|gb|ACU06655.1| Isoleucyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 1161

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 6/266 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K  +    ++ VW D+ +       Y         + K +PAD    G D     F+ ++
Sbjct: 626 KAMNRETDLIDVWFDSGSMPYAQLHYPFENKELIDQNKAFPADFIAEGVDQTRGWFYTLH 685

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +  ++     + +   +   G+K+SK LGN +DP   +E+ G DA R++++    
Sbjct: 686 AIGTAVFDSVAYKNVMSNGLVLDKNGQKMSKRLGNAVDPFTTLEKYGPDATRWYMIANAN 745

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             ++  +D +G+ +                ++   +  +           E D  ILS  
Sbjct: 746 PWENLKFDVEGIDEVRRKFFGTLYNTYSFFALYANVDGFKYSEREIENRPEIDRWILSEL 805

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++++ E   +    +    + + V++   + Y    +    K    D   +      
Sbjct: 806 NLLVKDVTEYYNDYEPTKVARAINNFVNDNLSNWYVRLCRRRFWKGDYSDDKISAYQTLY 865

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
             +  +A +     P   ++++  L 
Sbjct: 866 TCLVTVAKIAAPIAPFFMDQLYQDLN 891



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 19/148 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +          N  P I H     + D+  R+   +G  V    G D HG  I    
Sbjct: 38  GKPEYVFYEGPPSANGMPGIHHVMARALKDIFCRYQTQNGKQVFRKAGWDTHGLPIELGV 97

Query: 63  QNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +     TK  +                  + +  + D+ + +   +  DD   T E ++ 
Sbjct: 98  EKELGITKEDIGTKISVEDYNQACRNAVMRYTDVWNDLTEKIGYWVDLDDPYITYEPKYM 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
           +T   L K++ DK  +YKG     YS +
Sbjct: 158 ETVWWLLKQLYDKNLLYKGYTIQPYSPK 185


>gi|103488497|ref|YP_618058.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123078012|sp|Q1GNP7|SYL_SPHAL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|98978574|gb|ABF54725.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 849

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K YI     YP+ + H+GH     + DVLARF R+ G DVL   G D  G     AA
Sbjct: 33  QKPKAYILEMFPYPSGRIHMGHVRNYAMGDVLARFKRMTGHDVLHPMGWDAFGMPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +   N    R     L   I +   + T E  ++   + L+  +   G +Y
Sbjct: 93  MEKGVHPGGWTRANIDAMRAQLKRLGLAIDWSRELATCEPDYYGQEQALFLDLHAAGLVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  +   +F +++ + D+LL   
Sbjct: 153 RKESYVNWDPVDMTVLANEQVIDG----RGWRSGALVEKKKLSQWFLKITDFADELLEGL 208

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
            S  ++   +    E       GL
Sbjct: 209 GSLDKWPDKVRLMQENWIGKSQGL 232



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 73/176 (41%), Gaps = 33/176 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP  ++++ G DA+R+F++ +    +D  + + G++         G    
Sbjct: 620 KMSKSKKNVVDPDAILDQYGADAVRWFMLSDSPPERDLPWSEAGIE---------GAWRF 670

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V R   +  +  +            D+ +     + +  +  +++    ++A+A++ +L 
Sbjct: 671 VQRLWRLFGETENVGDGG------EDKGLARKLHQTIAGVAADIEALGFNKAVAKIHALA 724

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +E     +  KP                   E   +L +L+   +P LA + +  L
Sbjct: 725 NE----IEKAKP--------------SATRAEACAKLILLVAPMMPHLAEEAWTAL 762


>gi|50842379|ref|YP_055606.1| leucyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|282854163|ref|ZP_06263500.1| leucine--tRNA ligase [Propionibacterium acnes J139]
 gi|50839981|gb|AAT82648.1| leucyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|282583616|gb|EFB88996.1| leucine--tRNA ligase [Propionibacterium acnes J139]
 gi|314966913|gb|EFT11012.1| leucyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981254|gb|EFT25348.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091823|gb|EFT63799.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315093169|gb|EFT65145.1| leucyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103326|gb|EFT75302.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327734|gb|EGE69510.1| leucine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 826

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPIDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGHKEPVRVFTTRPDTL 260



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 110/301 (36%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLYDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +                 R  + +  D D
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQR----AWRVAAEVTSDPD 657

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 658 ------ADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|154495149|ref|ZP_02034154.1| hypothetical protein PARMER_04197 [Parabacteroides merdae ATCC
           43184]
 gi|154085699|gb|EDN84744.1| hypothetical protein PARMER_04197 [Parabacteroides merdae ATCC
           43184]
          Length = 1141

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 125/393 (31%), Gaps = 10/393 (2%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           FIRTT  R              +            +L+D                     
Sbjct: 477 FIRTTACRERMIELNNTINWKPQSTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDG 536

Query: 154 HNPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
              +     EE Y     + +  L+           P E   E    +      +     
Sbjct: 537 AEEICIGSVEELYNEIEKSVKAGLMESNPYKELKFQPGEYTKENYEKIDLHRPYVDDVIL 596

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL-- 268
             + G  +  +   ++ VW D+         Y           K +PAD    G D    
Sbjct: 597 VSESGKPMKRETD-LIDVWFDSGAMPYAQIHYPFENKEIFDDRKVYPADFIAEGVDQTRG 655

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F  ++  A ++  ++     V +   +   G K+SK LGN +DP   IE+ G D LR++
Sbjct: 656 WFFTLHAIATMVFDSVSYKAVVSNGLVLDKNGNKMSKRLGNAVDPFATIEQYGSDPLRWY 715

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
           ++   +   +  +D DG+++                ++   +  +D   P        E 
Sbjct: 716 MITNASPWDNIKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFDYSEPDVDWKERPEI 775

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  ILS+ + +++++   +      RA   +   V++   + Y    +            
Sbjct: 776 DRWILSLLNSLVKDVDGFLDTYEPTRAGRAISDFVNDNLSNWYVRLNRRRFWGGGMTTDK 835

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +        +  +A L+    P  A+++F  L
Sbjct: 836 LSAYQTLYTCLETVAKLMAPIAPFYADRLFCDL 868



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 25/203 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +              N  P I H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGHPSFVFYEGPPSANGMPGIHHVIARSIKDIFCRYKTMKGYLVNRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + ++ + D+   +   +  ++   T + R+
Sbjct: 98  VEKTLGITKEDIGKKISVAEYNAACRRDVMKFTKEWTDLTQKMGYWVDLENPYITYDNRY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDE-----AYYNDDEVYKGADGQYYNAQHNPV 157
            +T   L K++  KG +YKG     YS            N    Y+        AQ   +
Sbjct: 158 IETLWYLLKELYKKGLLYKGYTIQPYSPAAGTGLSSHELNQPGCYRDVKDTTCTAQFRIL 217

Query: 158 QWMEEEGYFFRLSAYQDKLLSYY 180
              + E   F    +     + +
Sbjct: 218 DP-KPEMAGFGEPFFLAWTTTPW 239


>gi|68475681|ref|XP_718047.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
 gi|13591779|gb|AAK31350.1|AF352020_1 nuclear encoded mitochondrial leucyl-tRNA synthetase [Candida
           albicans]
 gi|46439795|gb|EAK99108.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
          Length = 924

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  EK Y      YP+   HIGH     I+DV+AR+ R  G +V+   G D  G     A
Sbjct: 54  ETNEKFYSLAMFPYPSGVLHIGHLRVYTISDVVARYKRSKGFNVIHPMGWDAFGLPAENA 113

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    + + N    ++  +     +D    + T+   ++   + ++  + ++G  
Sbjct: 114 AVERNINPSEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFLMLFERGLA 173

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V               V+    E +F  ++ Y  +L   
Sbjct: 174 YRKAAEINWDPVDNTVLANEQVDAE---GRSWRSGAIVEKRNLEQWFIGITKYAKELNRD 230

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++   +      +G
Sbjct: 231 LKNLPDWPEKVKTMQKNWIGESNG 254



 Score = 46.7 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 33/199 (16%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N  DP E IE  G D +R  L+          + ++ +       L   I 
Sbjct: 655 FEKMSKSKHNGADPGEFIERYGADVIRAHLLFSAPVSDTLNWQEEQISGTDRW-LRRVIQ 713

Query: 360 NLVSRSVSMILKD-----------------YDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             +  S++ I KD                  + +      F   +  + +     +Q I 
Sbjct: 714 --LGDSITEIPKDQFKTEASGSSQTFQNVTLNKVHYDSIEFNSQELELYNTIQGYVQSIA 771

Query: 403 ENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +++    ++  ++ ++ + + +             KT       +++ + +   +L I 
Sbjct: 772 SSIEVKFSLNTIVSDLMKMTNTISEAI---------KTTNTYNQDLIFDSYQ---KLLIC 819

Query: 462 LQAFVPKLANKIFDILFVA 480
           +    P  A + ++   + 
Sbjct: 820 MSPVTPATAEECWERFALN 838


>gi|317014979|gb|ADU82415.1| leucyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 806

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/392 (13%), Positives = 113/392 (28%), Gaps = 38/392 (9%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKDERENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDSALEGAHR--FIKRLYDKANAISPTTSKPEFKGVSLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ ++                  A +   +  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALN------------------AQSNERILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L+  +P  A ++ + LF  +  +  +  +  L
Sbjct: 712 LEPMIPHTAWELSERLFKRENFKPIEVDESAL 743


>gi|268560176|ref|XP_002646150.1| C. briggsae CBR-VRS-2 protein [Caenorhabditis briggsae]
          Length = 1048

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 128/362 (35%), Gaps = 48/362 (13%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--- 217
             +    R   +  ++ +YY S  +         E     K+  +    + K F      
Sbjct: 495 SRDWCISRQLWWGHRIPAYYVSFTDKREQPLAEEEYWVSAKTEEEARQKAAKKFQVAEDL 554

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I++  D   ++  W  +        G+ DN       F+P+ +   G DIL F    + +
Sbjct: 555 IQLKWDED-VLDTWFSSGMWPFAVFGWPDNTK-DMDLFFPSAVLETGHDILFFWVARMVF 612

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A  L+  LP  + +         G K+SKSLGNVIDP++VI  V ++ L+  L+     
Sbjct: 613 MAQELTGKLPFKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGVTLEGLQAQLLSGNLD 672

Query: 336 GKDG-----------------------------------FYDKDGLKKRVNADLANGIGN 360
            K+                                      + D L+ +      N I  
Sbjct: 673 EKEIAVAKAGQARDYPDGIPECGVDALRFALLNYTSQGRDINLDVLRVQGYRFFCNKIWQ 732

Query: 361 LVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            V  S++   +  +            T +D+ ILS  ++ ++E  E ++     +A +  
Sbjct: 733 AVRFSLNQFNEKPEQKPTFNIDLSKATPTDKWILSKLAKAVKETNETLKVYNFTQATSIT 792

Query: 418 ISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +       D Y +A KP  L   NP      + V    +     L+   +P ++ +++ 
Sbjct: 793 YNFWLYDFCDVYIEAIKP-VLYGDNPTLRQIAISVLHLCVDTGLRLISPLMPFISEELWQ 851

Query: 476 IL 477
            L
Sbjct: 852 RL 853



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
              E   I           H+GHA    + D + RF+R+ G   LF  G D  G      
Sbjct: 112 SNTESFTICIPPPNVTGTLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVV 171

Query: 62  AQNA---------------GVTTKVFVDQNSRN--FRDMADVLD--ISYDDFIRTTEKRH 102
            +                     +V+  +N +     D    L   + +D  + T + + 
Sbjct: 172 VEKRLKRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKM 231

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++ + G IY+      +S 
Sbjct: 232 CRAVTEAFIQMHESGTIYRSNRLVNWSC 259


>gi|154174333|ref|YP_001408523.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|189082988|sp|A7GZ81|SYL_CAMC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112803061|gb|EAU00405.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 821

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R +  +VL   G D  G     AA  
Sbjct: 35  PKKYILSMFPYPSGRIHMGHVRNYSIGDALARYYRKNCFNVLHPIGFDSFGMPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG +Y+ 
Sbjct: 95  HKIHPKKWTYENIDYMKKELSSLGFSFSDRRMLATSDPLYTKWEQSFFIKMFEKGLVYRK 154

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          N V   E  GY+F+++ Y ++LL+  ++
Sbjct: 155 SAIVNWCEHDQTVLANEQVEDG----CCWRCGNEVVQREFPGYYFKITQYAEELLNDLKT 210

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E      SGL
Sbjct: 211 LEGKWPNQVIAMQENWIGKSSGL 233



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 97/276 (35%), Gaps = 35/276 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------ 278
           ++   W  A       T      D     +W   D ++ G +    H +Y   F      
Sbjct: 505 FVESSWYFARFASDEKTWQQTAFDKKSVDYWMSVDQYIGGIEHAILHLLYARFFQKVLRD 564

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L  + P    + + G +L  G+K+SKS GNV+DP ++I   G D  R F++      
Sbjct: 565 LGYLRDDEPF-SNLLTQGMVLKDGKKMSKSKGNVVDPDDIINRYGADTARLFILFAAPPQ 623

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           K+  ++   ++       A    N +      I K             + ++        
Sbjct: 624 KELEWNDSAVEG------AYRFLNRLWDKAKTIKKSEILPAIEHANLNKDEKYARMKVYE 677

Query: 397 VLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            L++  E   +    +  +A  +  ++ ++              + D  +T      E  
Sbjct: 678 ALKKSNEVFNETFAFNTLIAACMEALNALNA------------QDNDDVNT------EGF 719

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +  LL+  VP +AN++ + LF        + L++
Sbjct: 720 FIILNLLEPIVPHIANELSEELFRRKNFTKLEILEE 755


>gi|15896289|ref|NP_349638.1| isoleucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81529473|sp|Q97ES0|SYI_CLOAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15026098|gb|AAK80978.1|AE007801_2 Isoleucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510445|gb|ADZ22081.1| isoleucyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 1035

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/411 (13%), Positives = 139/411 (33%), Gaps = 18/411 (4%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSL-RDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   +    W+  +      +  +    +  RD+   N+++++   D          V
Sbjct: 378 SEKFTHSYPHCWRCDTPLLYYPRDSWFVRMTSLRDKLVENNNKIHWYPDNIRTGRFGKFV 437

Query: 158 QWMEEEG------YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           + + + G      +   L  +Q +            L  +  N   +          +  
Sbjct: 438 ENVIDWGISRDRYWGTPLPIWQCECGHRDCVGSIEELKEKGINVPENIELHKPYIDEVKL 497

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G  +    + ++  W D+ +       Y           +PA       D     
Sbjct: 498 TCPKCGKPMTRTEE-VIDCWFDSGSMPFAQLHYPFENKEVFENTFPAQFISEAVDQTRGW 556

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  +         +     +   G K+SK  GNV+DP +V++  G DA R+  
Sbjct: 557 FYTLLAISTSIFDKSSFENCIVLGHVLDKHGLKMSKHKGNVVDPFDVLDNQGADACRWHF 616

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGMIPTPGAFTESD 387
               A      + ++ + +       + + N+ S  V  + I K          +    D
Sbjct: 617 YTSSAPWLPTRFSQEDVAETQ-RKFLSTLWNVYSFYVLYAEIDKFNPNDYKDFVSGNVMD 675

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRA 444
           + I+S  + + +++   + +  I +A  ++   V ++ + Y   +  + W  + T+    
Sbjct: 676 KWIVSRLNTLTKDVGNYLDSYGITQAALEIQDFVDDLSNWYVRRNRSRYWTQELTDDKVG 735

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + V      V+  L+ +   F+P +  +I+  L  +      +S+     P
Sbjct: 736 AYV--TLYRVLVTLSKVAAPFIPFMTEQIYQSLVTSINEGAEESVHLCKWP 784



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PH+GH    ++ D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPTANGRPHVGHIITRVMKDLIPRYKVMKGYKVPRKAGWDTHGLPVELEIEKKLGISGKP 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V      ++DM++ L   +  ++   T    + ++     K++
Sbjct: 107 QIEEYGIEKFVKECKESVFSYVSLWKDMSEKLGYWVDMENPYVTYHNDYIESVWWALKQM 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DK  +YKG     Y  R     +  EV +G  
Sbjct: 167 WDKDLLYKGHKIVPYCPRCGTALSSHEVAQGYK 199


>gi|159903416|ref|YP_001550760.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687104|sp|A9BAE4|SYL_PROM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|159888592|gb|ABX08806.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 872

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 87/204 (42%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++  Y  +   YP+   H+GH    +I DV+AR HR+ G  VL   G D  G     A
Sbjct: 44  EDQKTFYALSMFPYPSGNLHMGHVRNYVITDVIARVHRMKGFSVLHPMGWDAFGLPAENA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   ++ ++N  + R   D L   I +D    T++  ++   + ++ K+ + G  
Sbjct: 104 AIERNIQPDIWTEKNISHMRSQLDRLGLSIDWDREQTTSKSEYYKWTQSIFLKLYEAGLA 163

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V          A    V+  + + +F +++ Y + LL  
Sbjct: 164 YQKSATVNWDPVDKTVLANEQVDADGKSWRSGA---LVEKKQLKQWFLKITDYAEILLKD 220

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   ++           G
Sbjct: 221 IDTLTEWPERVKTMQSNWIGKSVG 244



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 19/179 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP  VI++ G D  R F++ +    KD  +D   ++ +        +  
Sbjct: 628 EKMSKSKHNGIDPSTVIDKYGADTARMFILFKAPPEKDLEWDDADVEGQYR--FLQRLWR 685

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE-SILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
           L++ S +      D            DE S+       ++EI  ++ +    + A+++++
Sbjct: 686 LINESKTYNKLSLDSNENNNLNNLNQDEISLRRSVHLAIKEISNDLNEGNQFNTAISELM 745

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L + ++                 +    + V  E +  L  +L  F P LA + +  L
Sbjct: 746 KLSNNMNELL-------------GKCR--ISVVNESLSILIRILSPFAPHLAEEAWSTL 789


>gi|314978351|gb|EFT22445.1| leucyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|315088782|gb|EFT60758.1| leucyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKVIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|314958300|gb|EFT02403.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPVSTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|313818419|gb|EFS56133.1| leucyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|314960145|gb|EFT04247.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|315085801|gb|EFT57777.1| leucyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG +Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLVY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+            
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNAT---------- 701

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
             +KT             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 702 --RKTIDSGCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|237798422|ref|ZP_04586883.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021274|gb|EGI01331.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 372

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    ++    L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIAYMKNQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230


>gi|295130455|ref|YP_003581118.1| leucine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376678|gb|ADE00533.1| leucine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313772360|gb|EFS38326.1| leucyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807371|gb|EFS45858.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313809880|gb|EFS47601.1| leucyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313825061|gb|EFS62775.1| leucyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313830793|gb|EFS68507.1| leucyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834011|gb|EFS71725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314973218|gb|EFT17314.1| leucyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314975890|gb|EFT19985.1| leucyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314983642|gb|EFT27734.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987590|gb|EFT31681.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990075|gb|EFT34166.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315084461|gb|EFT56437.1| leucyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315096127|gb|EFT68103.1| leucyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327326046|gb|EGE67836.1| leucine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327332082|gb|EGE73819.1| leucine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327443287|gb|EGE89941.1| leucyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327446071|gb|EGE92725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327447947|gb|EGE94601.1| leucyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328753613|gb|EGF67229.1| leucyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760453|gb|EGF74021.1| leucine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|212550691|ref|YP_002309008.1| valyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548929|dbj|BAG83597.1| valyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 873

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 123/365 (33%), Gaps = 57/365 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++       L    +      P + +N         +KD ++SR+   
Sbjct: 352 PIEPKLSMQWFLKMKNLAKPALESVMNDTILFYPSKFKNI-YRHWMENVKDWNISRQ-LW 409

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 410 WGHRIPAYFLPGGKFVVAETLEKALVLAKEKTGNPKLQLSDLHQDEDSLDTWFSSWLWPI 469

Query: 240 TTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    ++ P   +   ++P    V G DI+ F    +    +            F+    
Sbjct: 470 SVFDGVNKPHNKEIEYYYPTSDLVTGPDIIFFWVARMIMSGYEFRQKPCFHNVYFTGIVR 529

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  +P+++I+  G D +R  L+   + G D F+D+   K+  N     
Sbjct: 530 DRSGRKMSKSLGNSPEPLDLIDRYGADGVRMGLMLSASAGNDIFFDEILCKQGRN----- 584

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
              N +  +  ++ +     I  P +   + +   S  +   + +  +     I  AL  
Sbjct: 585 -FNNKIWNAFRLLKRWQTADIEQPESSALTIQWFESQLNITAKNVNNSFAKYRISEALVD 643

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANK 472
           +  L        D    W L+   P+    +   T ++       L  LL  F+P +  +
Sbjct: 644 IYKLFK------DEFSAWYLEVIKPEYEQPIDKKTYQITLGFFDSLLKLLHPFIPFITEE 697

Query: 473 IFDIL 477
           ++  L
Sbjct: 698 LWQSL 702



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 21/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            R+   I           H+GH     I D+L R  R+ G +V +  GTD          
Sbjct: 35  SRQPYTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMLGKNVCWVPGTDHASIATEAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
                           +        +  ++     +    L  S D   RT    +K+  
Sbjct: 95  VAKLSKKGISKTNLTREQFSKYAWNWTRRHGGIILEQLKKLGASCDWE-RTCFTMDKQRS 153

Query: 104 DTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +   ++  + +KG IY+      W  +   A  +++ VYK   G+ Y  ++  V
Sbjct: 154 KSVTKVFVDLYNKGLIYRDIRMINWDPIAKTAISDEEVVYKKQKGKLYYIRYKIV 208


>gi|313838589|gb|EFS76303.1| leucyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 107/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +      L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTVQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|313820181|gb|EFS57895.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823011|gb|EFS60725.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|314925410|gb|EFS89241.1| leucyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+            
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNAT---------- 701

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
             +KT             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 702 --RKTIDSGCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|313813083|gb|EFS50797.1| leucyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|313801759|gb|EFS42993.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313816139|gb|EFS53853.1| leucyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313827958|gb|EFS65672.1| leucyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|314962951|gb|EFT07051.1| leucyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314967975|gb|EFT12074.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315098391|gb|EFT70367.1| leucyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315108477|gb|EFT80453.1| leucyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|313764602|gb|EFS35966.1| leucyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|314915596|gb|EFS79427.1| leucyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918448|gb|EFS82279.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314919937|gb|EFS83768.1| leucyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314931951|gb|EFS95782.1| leucyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955818|gb|EFT00218.1| leucyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|327450925|gb|EGE97579.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453725|gb|EGF00380.1| leucyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328754347|gb|EGF67963.1| leucyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328754923|gb|EGF68539.1| leucyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPVSTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|300814550|ref|ZP_07094804.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511318|gb|EFK38564.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 803

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK+Y+     YP+ Q  H+GH       D++AR  R  G +VLF  G D  G      
Sbjct: 30  DREKIYLLVEFPYPSGQGLHVGHPRPYTALDIVARKRRYQGYNVLFPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   QN ++F++    +  S+D    I TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNKIHPAIVTKQNIKHFKEQLKSIGFSFDWSREINTTDPEYYKWTQWIFLQLYKHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV     G      +  V    +  +  +++AY D+L+  
Sbjct: 150 YKKESPINWCPSCKTGLANEEVI----GGKCERCNTEVVRRVKSQWMLKITAYADRLIDD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +          ++   I   +
Sbjct: 206 LDDVDYIERVKTQQKNWIGRSE 227



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 109/343 (31%), Gaps = 65/343 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E       G   L+  +
Sbjct: 415 FKLRDWVFSRQRYWGEPIPIVHCPKCGFVPVPEDQLPLLLPEVENYEPTDDGESPLANIK 474

Query: 212 KTFDWGIKIP----DDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +                M  W         Y                +W P D +  
Sbjct: 475 EFVETTCPKCGCHAHRETDTMPQWAGSSWYFLRYADPHNKDALASKDALNYWTPVDWYNG 534

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    EK+SKS GNV++P +
Sbjct: 535 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYVKRTSHGMILGENNEKMSKSRGNVVNPDD 594

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D LR + +      K   + + G+  R      + + NL     S IL D D 
Sbjct: 595 IVHDYGADTLRTYEMFIGDFEKPVPWMETGV--RGCRRFLDRVWNL-----SDILVDGDK 647

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
                       ES+  +  + ++++  + +N   + A+A ++SL++E   ++       
Sbjct: 648 YS----------ESLEKLIHKTIKKVSYDYENLKANTAIAALMSLLNEFVANKNIT---- 693

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               K +               R   +LL    P +  ++++ 
Sbjct: 694 ----KAD--------------FRTFLMLLNPVAPHITEELWEQ 718


>gi|327330752|gb|EGE72498.1| leucine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 826

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHAIMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|315046106|ref|XP_003172428.1| valyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342814|gb|EFR02017.1| valyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 1049

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 79/526 (15%), Positives = 153/526 (29%), Gaps = 91/526 (17%)

Query: 35  ARFHRLDGLDVLFTTGT-------DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
            R+ +  G+ V             D+             +T     +   R   +  + +
Sbjct: 342 KRYQKFIGMKVKHPFIDRLLPIFADDKVDP-EFGTGAVKITPAHDFNDYIRGKDNNLEFI 400

Query: 88  DISYDD--FIRTTEK----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            I  DD  F          +  D    +  K+ +KG   K   +     +     + D +
Sbjct: 401 SIMNDDGTFNENAGPFAGVKRFDARYQVIDKLKEKGLYVKWENNPMKVPQC--VKSGDVI 458

Query: 142 YKGADGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
                 Q++      V              +    E  +FR     +      +      
Sbjct: 459 EPIMKPQWWMNMTELVKPAIKAVESGEIIIRPESAEKSYFRWMNNINDWCLSRQLWWGHQ 518

Query: 188 LPIERRNEVISFVKSGLKDLSLS------------RKTFDWGIKIPDDPQYIMYVWIDAL 235
            P    +           +L ++            +K       +  DP  ++  W  + 
Sbjct: 519 APAYFVDIEGEKGDDADGNLWVTGRTEEEARAKAEKKFPGKKFVLKRDPD-VLDTWFSSG 577

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +T G+           +P  +   G DIL F    +      ++  +P  K+V+ H
Sbjct: 578 QWPYSTLGWPKKTH-DFENLYPVSILETGWDILFFWVARMIMLGIKMTGQVPF-KEVYCH 635

Query: 294 GFILH-KGEKISKSLGNVIDPIEVI----------------------------------- 317
             I   +G K+SKSLGNV+DPI+V+                                   
Sbjct: 636 SLIRDSEGRKMSKSLGNVVDPIDVMNGISLQTLHDKLLEGNLAEKEVAIATKFQKKAFPK 695

Query: 318 --EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
              E G DALR+ L+     G D  +D   +         N I       +  +  D+  
Sbjct: 696 GIPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKFVLGKLGDDFKP 753

Query: 376 M--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                  G  + S+  IL   ++  +   E ++N+    A   +         D + +  
Sbjct: 754 QATPSRTGKESLSERWILHKFNQAAKVTNEALENREFSVAANTIYQYWYSQLCDVFIENS 813

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K       +P    +        +     L+   +P +  +++  L
Sbjct: 814 KSLLQPDADPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 859



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 8   YISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           Y    I  PN     H+GHA    + D + R+ R+ G  VL+  G D  G       +  
Sbjct: 126 YFVIPIPPPNVTGALHMGHALTKALQDTMIRWQRMKGKTVLYLPGYDHAGISTQSVVEKI 185

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
              T                   +  +   +       L  S+D      T ++      
Sbjct: 186 LWKTEKKTRHDIGREAMMGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDENLSAAV 245

Query: 107 RILWKKISDKGDIYKGCYSGWYS 129
              + ++ ++G IY+G     + 
Sbjct: 246 TETFVRLHEEGTIYRGNRLVNWC 268


>gi|161830298|ref|YP_001596893.1| valyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762165|gb|ABX77807.1| valyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 920

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 138/395 (34%), Gaps = 86/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++ A     +   ES     +P       + ++   ++D  +SR+   W
Sbjct: 348 IEPLLTDQWFIKMEALAKPAMEAVESGELKFIPKNWEKTYLQWLS-NIQDWCISRQ-LWW 405

Query: 217 GI--KIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G    +  D +                             ++  W  A      T G+ +
Sbjct: 406 GHRLPVWYDEEKNSYVGRSREEILKKYHLSPDVKLQQETDVLDTWFSASLWPFATLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KG 300
             +  K  F+P  + V G DI+ F    W A ++   L L  K+  H   +H      +G
Sbjct: 466 KTESFKT-FYPTQVLVTGFDIIFF----WVARMVMMGLKLTHKIPFHSVYIHGLIRDSQG 520

Query: 301 EKISKSLGNVIDPIEVIEE-------------------------------------VGVD 323
            K+SKS GNVIDPI++I+                                       G D
Sbjct: 521 RKMSKSKGNVIDPIDIIDGISLDALIEKRTHALLQPKMAKTIEKMTRKEFPNGIASFGTD 580

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+      + G+D  +D   +      +  N I N  +R V+M  ++ D     P ++
Sbjct: 581 ALRFTFCALASRGRDINFDMGRIDG--YRNFCNKIWN-AARFVTMNTQEKDLNPEKPLSY 637

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT-N 440
           + +DE I +   + ++   E +           +         D Y +  K     K   
Sbjct: 638 SAADEWIRTRLQQTIKNAEEALSQYRFDLLAQTLYEFTWNEYCDWYVEFAKCILYDKQAK 697

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        +EV+  L  LL   +P +  +I+ 
Sbjct: 698 PAQLRGTRVALLEVLEILLRLLHPVMPFITEEIWQ 732



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 20/168 (11%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GH ++  + D L R+HR+ G   L+  GTD  G       +    
Sbjct: 34  CIMLPPPNVTGTLHMGHGFQQTLMDTLIRYHRMKGERTLWQGGTDHAGIATQMVVEQQLA 93

Query: 68  TT----------------KVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRIL 109
                               + +++          L +S D F    + ++         
Sbjct: 94  QEDLTREDLGRQAFIKRVWEWRERSGGKITHQMRRLGVSIDWFRERFSMDEGLSRATTEA 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++  +G IY+G     +  +     +D EV       +      P+
Sbjct: 154 FIRLHHEGLIYRGKRLVNWDPKLNTAISDLEVVTEEVEGHLWHIRYPL 201


>gi|108805982|ref|YP_645919.1| leucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123068795|sp|Q1AR71|SYL_RUBXD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|108767225|gb|ABG06107.1| leucyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 817

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 74/195 (37%), Gaps = 4/195 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y  T + YP+   H+GH Y M  +D  ARF R+ G  V F  G D  G     AA
Sbjct: 40  SKPKHYALTMLPYPSGDLHVGHWYAMTPSDTRARFMRMRGYRVFFPIGFDAFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +   N    R     +     +D  + T +  ++   +  + K  +KG  Y
Sbjct: 100 IKRGIHPRDWTYSNIERMRGQLRQMGTMFDFDAEVVTCDPEYYRWNQWFFLKFYEKGLAY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +          ++V      +       PV       + F+++ Y ++LL + 
Sbjct: 160 REKAPVDWCPSCNTTLAREQVV--GPDRRCERCDTPVIKRNLAQWLFKITDYAEELLDFS 217

Query: 181 ESHPEFILPIERRNE 195
           E      +   +RN 
Sbjct: 218 EIEWPERVKALQRNW 232



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 120/358 (33%), Gaps = 52/358 (14%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E  G           LL              + N+     +      
Sbjct: 434 QRYWGTPIPIVYCERCGTVPVPEEDLPVLLPEDAEFMPTGESPLKFNDEFRKTECPRCGG 493

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R+T         D              YL+        D  +   W P D +  G +
Sbjct: 494 PAERET---------DTMDTFVDSSWYQYRYLSPHYEEGPFDPERGSRWLPVDQYTGGIE 544

Query: 267 ILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F            + P+ +       +   G ++SKS GNV++P E ++
Sbjct: 545 HATMHLLYTRFFTKVMRDLGLVDFDEPMLRLFNQGVILGPDGNRMSKSRGNVVNPQEYVD 604

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMI 377
             G D LR +L+      + G +D  G++         G+   + R+ +++   D     
Sbjct: 605 RYGSDVLRCYLMFIGPWDEGGPWDPGGIE---------GVARWLRRAFTLVAGGDVSEAE 655

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             PG  +           R+++ + E ++    + A+A ++      + Y  A K     
Sbjct: 656 ADPGELS-------RRTHRLVKRVTEYLEGFRFNTAIAALME---HTN-YLLAVK----G 700

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRL 493
           +   +          E +R   ++L  F P  A ++++IL    +   + + S D+ L
Sbjct: 701 EVGEEE-------WREAMRSFLLVLAPFAPHHAEEMWEILGEEYSVHEQGWPSWDEEL 751


>gi|329847393|ref|ZP_08262421.1| leucyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328842456|gb|EGF92025.1| leucyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 856

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+     YP+ + H+GH     + D++ARF R  G DVL   G D  G     AA
Sbjct: 30  SKPKYYVLEMFPYPSGRIHMGHVRNYAMGDLVARFKRARGFDVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +   N  N R     L +S D      T    ++   +  +  +     +Y
Sbjct: 90  MERNVHPKGWTYDNIANMRSELKRLGLSIDWTREFATCAPEYYGQQQRWFIDLLKNDLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V +G            V+  +   +F R++ + D LL   
Sbjct: 150 RRESQVNWDPVDMTVLANEQVIEG----RGWRSGALVEKKKLTQWFMRITRFADDLLEGL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
            +   +   +            GL+
Sbjct: 206 STLDRWPDKVRTMQANWIGKSRGLQ 230



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 112/365 (30%), Gaps = 48/365 (13%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF-RLSAYQDKLLSYYESHPEFILPIE 191
           E +     V   + G     + + +    +  ++F R +  +        +   ++   +
Sbjct: 470 ERHPTWKHVNCPSCGAKARRETDTLDTFVDSSWYFARFTDPKHPQPINKAAADHWLPVDQ 529

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
               +   V   L    ++R     G     +P   +            T     +  G 
Sbjct: 530 YIGGIEHAVLHLLYARFITRALNHCGYLDVKEPFAGL---FTQGMLTHETYADGVDDIGK 586

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNV 310
                PAD+ V   D                   +  +V +   +     EK+SKS  N 
Sbjct: 587 PNWVEPADVQVETID----------------GKRVATRVSTGAALTIGDIEKMSKSKKNT 630

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           + P ++ +  GVD+ R F++ +    +D  +   G++             L  R   +  
Sbjct: 631 VAPGDIFDTYGVDSARLFVLSDSPPERDVQWSTSGVEGSW---------RLTHRIWDLFD 681

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
              D  IP                 + ++ + E  +    + A+A++  LV+ +      
Sbjct: 682 GLPDVAIPCTDEAAAIALR--KAAHKAVKLVTEGFEGFRFNAAIAKLYELVTTI-----R 734

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQS 488
                + KT  +         +E +  LA L+    P LA + +  L          +  
Sbjct: 735 TAD--IAKTGSEAR-------IEALTLLAGLIAPVTPHLAEECWTRLGRDGLIAEAAWPH 785

Query: 489 LDQRL 493
            D  L
Sbjct: 786 FDPAL 790


>gi|325996820|gb|ADZ52225.1| Leucyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998412|gb|ADZ50620.1| Leucyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 806

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 114/392 (29%), Gaps = 38/392 (9%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRAINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKDERENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDNALEGAHR--FIKRLYDKANAISPTTSKPEFKGVSLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ ++                  A +   +  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALN------------------AQSDERILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L+  +P  A ++ + LF  +  +  +  +  L
Sbjct: 712 LEPIIPHTAWELSERLFKRENFKPIEVDENAL 743


>gi|307638226|gb|ADN80676.1| Leucyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 806

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 114/392 (29%), Gaps = 38/392 (9%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKDERENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDNALEGAHR--FIKRLYDKANAISPTTSKPEFKGVSLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ ++                  A +   +  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALN------------------AQSDERILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L+  +P  A ++ + LF  +  +  +  +  L
Sbjct: 712 LEPIIPHTAWELSERLFKRENFKPIEVDENAL 743


>gi|171693671|ref|XP_001911760.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946784|emb|CAP73588.1| unnamed protein product [Podospora anserina S mat+]
          Length = 948

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 5/198 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y+     YP+   H+GH     IADV+ARFH L G DVL   G D  G     AA  
Sbjct: 75  EKKYVLPMFPYPSGYLHLGHLRVYTIADVVARFHSLRGHDVLLPMGWDAFGLPAENAAIE 134

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +   N    ++  DV++ S+D    + T +   +   + ++  + ++G  Y+ 
Sbjct: 135 RGIDPATWTKSNIAKMKEQLDVMNGSWDWSRELATCDPSFYKHTQKIFLLLREQGLAYQD 194

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y   D+    +++V          A+   V+  + + +F R+S ++D LL   E 
Sbjct: 195 EAEVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKRKLKQWFLRISQFRDSLLQDLEI 251

Query: 183 HPEFILPIERRNEVISFV 200
             +     ER   +    
Sbjct: 252 LSKDNNWPERVLTMQKNW 269



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 55/417 (13%), Positives = 117/417 (28%), Gaps = 96/417 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESH---------PEFILPIERRNEVISFVKSGLK 205
            PV+      +      Y    +                E  + +   +E  +  K+G  
Sbjct: 467 KPVEKWRLRDWLVSRQRYWGTPIPIIHCGSCGAVPVPEEELPVELPEVDEHWAGKKTG-N 525

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKFWP 257
            L    +  +        P       +D   +         +P   +         K  P
Sbjct: 526 PLETLEEWVNTSCPQCHGPARRDTDTMDTFVDSSWYFARFIDPHNDEVPFSREKARKMLP 585

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSA------------NLPL------------------- 286
            DL++ G +    H +Y                      P                    
Sbjct: 586 VDLYIGGIEHAILHLLYSRFIYKFLMGSTLVGETEGVQEPFKRLITQGMVHGKTYTDPAT 645

Query: 287 ----------------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                           P+ V +        EK+SKS  N +DP +VI   G DA R  ++
Sbjct: 646 GKFLKPDEVDLTDPARPRVVRTGEVAGVSYEKMSKSKYNGVDPTDVINLHGADATRAHML 705

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM-----ILKDYDGM-----IPTP 380
            +    +   +D D +           +  LV R  ++     + + ++           
Sbjct: 706 FQAPVSEVLDWDGDKIVGVTRW--LGRVWELVQRVSTISSSASVREFFEQEAARLGTMKE 763

Query: 381 GAFTESDES--ILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELK 437
               + D++  +     + ++ +  + +    ++  ++ ++ L    +   +       +
Sbjct: 764 KELQQWDKAARVWREVQKTVESVTGSYEKVYALNTVVSDLMIL---TNVIVEE------E 814

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           K  PD       V  E +  L  ++    P  A + + +L    E   F+S   R  
Sbjct: 815 KGVPD------GVKREAVEGLVRMMAPITPAFAEECWAVLH-PGETSIFKSEKGRFP 864


>gi|254467798|ref|ZP_05081204.1| valyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086608|gb|EDZ63891.1| valyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 935

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 121/359 (33%), Gaps = 56/359 (15%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIM 228
             ++           +   I         +          +   + GI  K       ++
Sbjct: 403 WLENIQDWCISRQLWWGHQIPAWYGPNGDIIVAHDYEEAKKIATEKGIDPKNLQQDSDVL 462

Query: 229 YVWIDALTNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             W  +          T  Y    +    K+ P+ + V G DI+ F    +      ++ 
Sbjct: 463 DTWFSSALWPFSTLDWTLEYPSVSNPVIDKYLPSSVLVTGFDIIFFWVARMVMLTKYVTG 522

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------------- 319
            +P             +G+K+SKS GNV+DPI++I+                        
Sbjct: 523 KIPFKHVYVHGLIRDSEGQKMSKSKGNVLDPIDLIDGIDLDKLIDKRTYGLMNPKQKESI 582

Query: 320 --------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+      + G+D  +D +  +     +  N I N  SR 
Sbjct: 583 AKRTKKEFPDGILAYGTDALRFTFASLASPGRDIKFDLNRCEG--YRNFCNKIWN-ASRF 639

Query: 366 VSMILKD----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V M   D    ++        F+++D  I S+    L+ I  N +N     A  ++   +
Sbjct: 640 VLMNCPDDDNGFEQCTDGFMNFSQADRWITSIFQNTLKNIETNFENYRFDLAAQEMYQFI 699

Query: 422 SE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   D Y +  K  +LK +N +          + ++  +  ++   +P ++ +I+ I+
Sbjct: 700 WDEYCDWYLEVAKV-QLKNSNSEATIRGTKRTLLGLLENILKMVHPLMPFISEEIWQII 757



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 71/194 (36%), Gaps = 22/194 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   I           H+GH +   + D L R+HR+ G + L+  GTD  G      
Sbjct: 34  EKKDNFSILLPPPNVTGTLHMGHGFNQTLMDSLTRYHRMRGSNTLWQPGTDHAGIATQIV 93

Query: 62  AQ--------------NAGVTTKVFVD------QNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+        + ++  R +    D S + F  T ++ 
Sbjct: 94  VERQLDQQNISRHDLGREKFIEKVWEWKEESGGKITQQMRRLGTSPDWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              +   ++ K+ + G IY+G     + ++ +   +D EV +  +  +      P+   +
Sbjct: 152 LSKSVNQVFVKLFNDGLIYRGKRLVNWDVKLQTAVSDLEVIQEEENGHLWHIDYPLANNQ 211

Query: 162 EEGYFFRLSAYQDK 175
           EE      +  +  
Sbjct: 212 EEKLTVATTRPETM 225


>gi|326568083|gb|EGE18167.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|297621535|ref|YP_003709672.1| Valyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376836|gb|ADI38666.1| Valyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 948

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 137/398 (34%), Gaps = 83/398 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++S +  +L    +     ++P   +N    ++   L+D  +SR+   W
Sbjct: 354 IEPYLSKQWFVKMSHFAPRLREIVQEEIVSLIPRNWQNTYFHWID-NLRDWCISRQ-LWW 411

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I I                                  ++  W  +     +T G+ +
Sbjct: 412 GHRIPIWYHKDNPDRVICYEGDGTPPEVEAEPDKWEQDPDVLDTWFSSALWPFSTLGWPN 471

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK-----VFSHGFILH- 298
             +    KF+P    V G DIL F    +      L    P P+      +F   +    
Sbjct: 472 KTE-ELEKFYPNSAMVCGHDILFFWVARMIMMGEHLFEKAPFPEVYLHSLIFGKSYWRKD 530

Query: 299 -----------------------------KGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                        K EK+SKS GN+IDP+E+IE+ G DA+R  L
Sbjct: 531 AGGGVQYCDEKERIAFDLGTKPVPKDVESKWEKMSKSKGNIIDPLEIIEDYGTDAMRMAL 590

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-------TPGA 382
               +       D+   ++  N   AN I N   R + M L   D +             
Sbjct: 591 CSSASQAWQIDLDRRKFEEFKN--FANKIWNGA-RFIFMNLDANDPLNSKQLSEGLDESR 647

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN 440
            T  D+ ILS  S+ ++++  N+ N    +A  +            Y +  KP    K  
Sbjct: 648 LTLEDQWILSSLSKTVEDVNFNLSNYQFDQAATRAYDFYWNEFCAYYLEIAKPVLFGKQG 707

Query: 441 -PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            P+       + V V+ Q   L+    P +  ++F  +
Sbjct: 708 SPEERKNKQKLLVIVLLQALRLIHPMAPFITEELFQKI 745



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    I DVL R+ R+ G +VL+  GTD  G      
Sbjct: 34  SEKPPYCIVLPPPNVTGVLHMGHALGSTIDDVLVRWKRMSGFEVLWVPGTDHAGIATQTV 93

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +   + T+                  + ++N          L  S D     F  T +K
Sbjct: 94  VERHLMKTQGKRRGDFKREAFLKLVWEWKEKNEGRILSQLKKLGCSCDWSRLRF--TMDK 151

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++   R  +K + +KG IY+G Y   +    +    DDEV            + P+
Sbjct: 152 GNNLAVRTAFKMLYEKGLIYRGDYLVNWDPVTQTAVADDEVEYEERQSSLWFFNYPL 208


>gi|317013358|gb|ADU83966.1| leucyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 806

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 105/381 (27%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+      G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCNNCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDVVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    S I            +  E+ +         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAQKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|296113510|ref|YP_003627448.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921204|gb|ADG61555.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326572403|gb|EGE22395.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|1890130|gb|AAB49704.1| valyl tRNA synthetase [Arabidopsis thaliana]
          Length = 1107

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 124/384 (32%), Gaps = 59/384 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---- 211
           P Q+  E   +             +  H           + +  V +      ++R    
Sbjct: 537 PKQYTAEWRRWLENIRDWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDHWVVARTEDD 596

Query: 212 -------KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                  K      ++  DP  ++  W  +    L+  G+ D  D  KA F+P  +   G
Sbjct: 597 AREEAAQKFLGKKFELTRDPD-VLDTWFSSGLFPLSVLGWPDVTDDFKA-FYPTSVLETG 654

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            DIL F    +      L   +P  K  F        G K+SKSLGNVIDP+EVI  V +
Sbjct: 655 HDILFFWVARMVMMGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTL 714

Query: 323 DALRYFLVREIACGKDGFYDKDGLKK--------------------------RVNADL-- 354
             L   L       K+    K+G  K                          ++N D+  
Sbjct: 715 GGLHKRLEEGNLDPKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILR 774

Query: 355 ---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQ 406
                   N +  +V   +         P   +        + ILSV ++ + +   ++ 
Sbjct: 775 VVGYRQWCNKLWNAVRFAMMKLGSGYTPPQTLSPETMPFSCQWILSVLNKAISKAVVSLD 834

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAI 460
                 A   + +       D Y +A KP      NP    +RA     + +  +     
Sbjct: 835 AFEFSDAANTIYAWWQYQFCDVYIEAIKP-YFAGDNPTFASERAHAQHALWI-SLETGLR 892

Query: 461 LLQAFVPKLANKIFDILFVADENR 484
           LL  F+P +  +++  L    +  
Sbjct: 893 LLHPFMPFVTEELWQRLPAPKDTE 916



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA    I D + R+ R+ G + L+  G D  G      
Sbjct: 165 SSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGVDHAGIATQVV 224

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + +Q           L  S D      T +++ 
Sbjct: 225 VEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSRECFTMDEQR 284

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++  +G IY+      +  
Sbjct: 285 SKAVTEAFVRLYKEGLIYRDIRLVNWDC 312


>gi|326568501|gb|EGE18573.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|317969890|ref|ZP_07971280.1| leucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 882

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 36  EAFYALSMFPYPSGNLHMGHVRNYVITDVVARVQRLRGKKVLHPMGWDAFGLPAENAAIE 95

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    + DQN  + RD  D L   I +D  + T    ++   + L+ +  D G  Y+ 
Sbjct: 96  RGVDPGAWTDQNIASMRDQLDQLGLSIDWDRELATCHDDYYRWTQWLFLQFLDGGLAYQK 155

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V               V+  +   +F +++ Y  +LL     
Sbjct: 156 DATVNWDPIDQTVLANEQVDGE---GRSWRSGALVEKRKLRQWFLKITDYAQQLLDDLSK 212

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +           +G
Sbjct: 213 LEGWPERVRTMQANWIGRSTG 233



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 90/217 (41%), Gaps = 27/217 (12%)

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A+   P+   +   +    EK+SKS  N +DP  VI++ G D  R F++ +    KD  +
Sbjct: 603 ADATDPRDPLTGDPLETFFEKMSKSKYNGVDPALVIDKYGADTARMFILFKAPPEKDLEW 662

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMIL---------KDYDGMIPTPGAFTESDESILS 392
           D   ++ +        I  L   ++   L         +     + +  A +E+++ +  
Sbjct: 663 DDADVEGQFR--FLQRIWRLADAALERGLSLAGGAGAPESVAERLGSGEALSEAEQELRR 720

Query: 393 VCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                +QEI +++  +   + A+++++ L + +                   A++   + 
Sbjct: 721 AVHTAIQEITDDLDGDVQFNTAVSELMKLSNAM---------------GTHLAASSDVLA 765

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            E +R L +LL  F P LA +++  L    E+   ++
Sbjct: 766 CEALRTLLVLLAPFAPHLAEELWLKLGGRSEDEALEN 802


>gi|68475816|ref|XP_717981.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
 gi|46439720|gb|EAK99034.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
          Length = 924

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  EK Y      YP+   HIGH     I+DV+AR+ R  G +V+   G D  G     A
Sbjct: 54  ETNEKFYSLAMFPYPSGVLHIGHLRVYTISDVVARYKRSKGFNVIHPMGWDAFGLPAENA 113

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    + + N    ++  +     +D    + T+   ++   + ++  + ++G  
Sbjct: 114 AVERNINPSEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFLMLFERGLA 173

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V               V+    E +F  ++ Y  +L   
Sbjct: 174 YRKAAEINWDPVDNTVLANEQVDAE---GRSWRSGAIVEKRNLEQWFIGITKYAKELNRD 230

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++ P++   ++   +      +G
Sbjct: 231 LKNLPDWPEKVKTMQKNWIGESNG 254



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 65/196 (33%), Gaps = 27/196 (13%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA---- 355
            EK+SKS  N  DP E IE  G D +R  L+          + ++ +             
Sbjct: 655 FEKMSKSKHNGADPGEFIERYGADVIRAHLLFSAPVSDTLNWQEEQITGTDRWLRRVIQL 714

Query: 356 ---------NGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
                    +      SRS  +      + +      F   +  + +     +Q I  ++
Sbjct: 715 GDSITEIPKDQFKTEASRSSQTFQNVTLNKVHYDTIEFNSQELELYNTIQGYVQSIASSI 774

Query: 406 Q-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +    ++  ++ ++ + + +             KT       +++ + +   +L I +  
Sbjct: 775 EVKFSLNTIVSDLMKMTNTISEAI---------KTTNTYNQDLIFDSYQ---KLLICMSP 822

Query: 465 FVPKLANKIFDILFVA 480
             P  A + ++   + 
Sbjct: 823 VTPATAEECWERFALN 838


>gi|326575588|gb|EGE25512.1| leucyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDHTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|326566006|gb|EGE16166.1| leucyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAH-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819763|sp|Q5L0V9|SYI_GEOKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 924

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 81/460 (17%), Positives = 150/460 (32%), Gaps = 30/460 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV---TTKVFVDQNSRNFRDMADVLDI--SY 91
           F       +      DE G    +A   AG+        + Q       +  +  I  SY
Sbjct: 333 FLVGQKYGLPVLCPVDERGYMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLGFITHSY 392

Query: 92  DDFIRTTEKR-HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               RT +      T +        + ++ +      +          + V    D    
Sbjct: 393 PHDWRTKQPTIFRATTQWFASIDKIRNELLQAIKETKWIPEWGEIRIHNMVRDRGDWCIS 452

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +             F     +  +      H   +      N         L     +
Sbjct: 453 RQRA-----WGVPIPVFYGENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFT 507

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
             +   GI        IM VW D+ +++                  PADL++ G D    
Sbjct: 508 HPSSPNGI--FTKETDIMDVWFDSGSSHQAVLVER------DDLVRPADLYLEGSDQYRG 559

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKSLGNV+ P +V+E+ G D LR +
Sbjct: 560 WFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQFGADILRLW 619

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTES 386
           +        D       LK+   +++   I N   R +   L D+D        G   E 
Sbjct: 620 VASVDYQA-DVRISDHILKQV--SEVYRKIRNTF-RFMLGNLFDFDPNQNAVPIGELGEV 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA 444
           D  +L+  ++++ ++++   +        ++     V     Y D  K     +    RA
Sbjct: 676 DRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRA 735

Query: 445 -STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              V  V  E +  LA L+   +P  A+++++ +    EN
Sbjct: 736 RRAVQTVLYETVVALAKLIAPILPHTADEVWEHIPNRREN 775



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             +  +   N R     L +   +D+   T +  +     
Sbjct: 105 LAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 214


>gi|326572553|gb|EGE22542.1| leucyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|326565043|gb|EGE15243.1| leucyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326574150|gb|EGE24098.1| leucyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDHTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|284047281|ref|YP_003397621.1| isoleucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283951502|gb|ADB54246.1| isoleucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 1049

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 125/382 (32%), Gaps = 59/382 (15%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
            +      P+ +  +  ++ R S  +D+LL+   +      P   ++        G  D 
Sbjct: 402 PHCWRCGTPLIYYAKPSWYIRTSQIRDRLLAS--NETVNWHPPHVKHGRFGNWLEGNVDW 459

Query: 208 SLSRKTFDWGIKIPD-------------------------DPQY---------------- 226
           +LSR+   WG  +P                          D  +                
Sbjct: 460 ALSRER-YWGTPLPIWRCENGHVHAIGSFDELEERSGVRLDDAHRPYVDEVSFPCAQCNG 518

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                  ++ VW D+                   + +PAD      D     F+++   +
Sbjct: 519 RMTRVPEVIDVWFDSGAMPFAQWHAPHENAEVFRERFPADYVCEALDQTRGWFYSLLAVS 578

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            LL         V     +  +G+K+SKS GNV+ P EV++  G DALR++         
Sbjct: 579 TLLFDQSSYKNVVCLGLILDGEGQKMSKSRGNVVVPDEVLDRFGADALRWYFFTSKQPWD 638

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSVCS 395
              +  + + + V   L           +     D         +    + D   LS  S
Sbjct: 639 GYRFSHETIGEMVRQFLLQLWNTYGFYVMYANANDVAPPPAPDPSALTNDLDRWALSRLS 698

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             ++ +RE M +     A   + + V ++  ++  +        + D  +T+ +  V   
Sbjct: 699 ATVETVRERMDDYDATTAGRAIQAFVDDLSNWYVRRSRRRFWDGDADAFATLRHCLV--- 755

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +A +L  F P   ++I+  L
Sbjct: 756 -AVAQMLAPFTPFFVDEIYRNL 776



 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 19/147 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +P + H    +  D+  R+  + G  V    G D HG  +  A +         
Sbjct: 50  PPTANGRPGVHHVLARVFKDIFPRYRTMTGYRVERKGGWDTHGLPVELAVEAELGFDKKE 109

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V     ++  + + +   +  DD  RT +  + ++     K I
Sbjct: 110 DIEEYGIARFNAKCRESVFTYLEDWSRLTERIGYWVDLDDAYRTLDNSYIESVWWALKTI 169

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            +KG + +      +  RD+   +  E
Sbjct: 170 WEKGLLTESYKVVPHCPRDQVTLSSHE 196


>gi|134046058|ref|YP_001097544.1| valyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132663683|gb|ABO35329.1| valyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 886

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 75/467 (16%), Positives = 154/467 (32%), Gaps = 32/467 (6%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
            + G  +         T   +V+++    +   +      +   R   ++  D  + +  
Sbjct: 261 QDFGTGVVMVCTFGDKTDVTWVNRHKLEVKKAINEKGQLTEICGRYAGQKSDDARKEIIS 320

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLS 170
            +  +  + K                  E+  G        +    V+    E  +    
Sbjct: 321 DLISEDYMIKQDPLEQNVGSCWRCKTPIEIIVGDQWFVNVTKLLKEVENAANEISWVPEH 380

Query: 171 AYQDKLLSYYESHPEFIL----------PIERRNEV-----ISFVKSGLKDLSLSRKTFD 215
                L    +   ++ +          P+    E             +     S  T  
Sbjct: 381 MKARLLKWVEDMGWDWCISRQRLFATPIPVWYCKECGEIIVAKPEDLPIDPTKDSPYTCK 440

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            G         ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y 
Sbjct: 441 CGNSKLVAETDVLDTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYT 499

Query: 276 --PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  ++   P  + V +       G K+SKS GNV++P E+ +  G DALR +     
Sbjct: 500 IVRSLAITGKKPWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW-ASNS 558

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESI 390
             GKD  +    ++          I N    +   +  +    + +  +       D  I
Sbjct: 559 TIGKDVPFAWKEVE--YGGRFLRKIWNACKFAKMNVSDEVISELKSLKSIEIDNPVDLWI 616

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST-- 446
           LS  + ++ ++ +++ N  I+  + ++   +     D Y +  K     K   + A    
Sbjct: 617 LSKLNDLISKVSKDLGNYKINTVV-EIQKFLWHEFCDNYIEMVKHRLYNKEESESAQKEK 675

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
               Y   +VI +   LL  F P  A  + +I  + D +  +   D+
Sbjct: 676 LMAQYTLYKVITESVKLLTPFTPHFAEIVGEIYEIDDLHTAWPVADE 722



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                D+N    R     L IS  +D    T    +    
Sbjct: 91  VEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVRSLGISIDWDREYITMNPDYVRKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + K+ +KG IY+G +   +  R E
Sbjct: 151 QTAFLKMYEKGLIYRGKHPVNWCPRCE 177


>gi|114562094|ref|YP_749607.1| valyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114333387|gb|ABI70769.1| valyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 968

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 136/415 (32%), Gaps = 102/415 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  + +     +   E+     +P +  N   S+++  +KD  +SR+   W
Sbjct: 374 IEPLLTDQWYVAVQSMAKTAIEAVETGEIKFVPQQYENMYFSWMRD-IKDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEAEVRAKHKFADSVVLRQDDDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 VGNKMSKSKGNVLDPLDMIDGIELETLVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----DYDGM 376
            DALR+ L    + G+D  +D   L         N + N  SR V M  +     D D  
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWN-ASRYVLMNTEVQTDPDSDEA 667

Query: 377 -------------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
                         P     + +D  I+ + ++ ++ + ++M       A   +      
Sbjct: 668 GEPLDCGQLLVDGKPGAMELSLADRWIIGLFNQTVKTVEDHMAAFRFDLAANTLYEFTWN 727

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              D Y +  KP  ++     +     +  V V+ ++  L+  F+P +   I+  
Sbjct: 728 QFCDWYLELTKP-VMQNGTEAQMRGTRHTLVNVLEKMQRLMHPFMPYITETIWQR 781



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L RF R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRFERMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + +Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKTRHDLGRDAFIDKVWDWKEQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ D   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SKAVQEVFVRLYDDELIYRGKRLVNWDPKLHTAISDLEVENKEKQGHMWHFRYPL 204


>gi|326559370|gb|EGE09795.1| leucyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 878

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTINKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|332181263|gb|AEE16951.1| Isoleucyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 1065

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/470 (15%), Positives = 150/470 (31%), Gaps = 28/470 (5%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    G  E   K+ K +    V       + +    D A       D  I    K    
Sbjct: 343 VHTAPGFGEDDNKVFKGSGVPTVCPVDNECKFTAEVPDYAGRFVKDCDKDIMERLKTEGK 402

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE- 163
             +   + +      ++      Y      +   + +        Y     P        
Sbjct: 403 LVKRD-QILHAYPHCWRCSSPLIYRAVGSWFVGVESIRDKLLKANYQITWQPEHIKNGRF 461

Query: 164 -GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS-----RKTFDWG 217
             +      +      Y+ +        +    +    +  L++LS +      K F   
Sbjct: 462 GKWLEGARDWAISRNRYWGNPIPVWKCPDCGKTICVGSRRELEELSGTYPEDLHKHFVDK 521

Query: 218 IKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
           I IP +          ++  W ++ +       Y           +PAD    G D    
Sbjct: 522 ITIPCECGGTMSRIPEVLDCWFESGSMPYAQNHYPFENKEYFEAHFPADFISEGLDQTRG 581

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+++   A  L         V +   +   G+K+SKSL N  DP   +   G DA+R F
Sbjct: 582 WFYSLTVLAAALFDRPAFKNCVVNGLVLASDGKKMSKSLRNYTDPAVAVNTFGADAIRLF 641

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---- 383
           L+        D  Y  +G++  + + L        S S  +   + DG+  T  AF    
Sbjct: 642 LMHSAVVKADDLKYSDEGVRDVLKSILIPLWN---SYSFYITYANIDGIQATGHAFDSVS 698

Query: 384 --TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                D  +LS+  +++ ++   +    + RA+  ++S + +++ ++  +      K+  
Sbjct: 699 PTNPLDRWLLSITQKLVTDVSGALDAYDLSRAIDPIVSYIDQLNNWYIRRSRRRFWKSEN 758

Query: 442 DRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           D   T         ++  +++    VP +   ++  L   ++       D
Sbjct: 759 DGDKTEAYETLYLALKTFSLVAAPVVPFITEIMWQNLRTPEDPESVHLAD 808



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 19/151 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPFATGLPHFGHFIPSTIKDIIPRYQTMKGKKVERRFGWDCHGLPVENLIEKELGLNSKT 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +    ++     L   + +D+  +T    + ++   + K +
Sbjct: 107 DIEKYGVAEFNEACRASVLRYVDEWKQAVTRLGRWVDFDNDYKTMNPDYMESIWWILKSL 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            +KG +Y+G Y   Y  R     ++ E+  G
Sbjct: 167 WEKGLLYEGHYILPYCPRCSTVLSNHELALG 197


>gi|257454653|ref|ZP_05619909.1| valyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447963|gb|EEV22950.1| valyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 981

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 137/431 (31%), Gaps = 94/431 (21%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           +  V+    + ++  +       +   E      +P + +N  +++++  ++D  +SR+ 
Sbjct: 383 NTIVEPWLTDQWYVSIEKLAKPAIEAVEDGRTEFVPAQYKNMYMAWMRD-IQDWCISRQ- 440

Query: 214 FDWG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTG 243
             WG  I    D +  +YV                            W  +     +T  
Sbjct: 441 LWWGHRIPAWYDDEGNIYVGRDEAEVRQKYHLADSLALRQDSDVLDTWFSSALWTFSTLD 500

Query: 244 YLDNPDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKV 290
           +    +          F P  + V G DI+ F         L           +P     
Sbjct: 501 WTGELNFDDYSQALKTFHPTSVLVTGFDIIFFWVARMMMMTLYFIKDKDGNPQVPFKTVY 560

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEE------------------------------- 319
                   +G+K+SKS GNV+DPI++I+                                
Sbjct: 561 VHGLVRDGQGQKMSKSKGNVLDPIDLIDGIDLETLVAKRTTGLMNPKDAQKIEKATRKEF 620

Query: 320 ------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+      + G+D  +D   ++   N +  N I N  +R V M   D 
Sbjct: 621 ADGIPAFGTDALRFTFTSLASTGRDINFDLKRIEG--NRNFCNKIWN-ATRFVLMNCVDK 677

Query: 374 D------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           +              +   ++ I+S  +  ++ I E+M           +   +     D
Sbjct: 678 EGNALNIDKTANTALWELPEQWIMSRLNSTVKAIHEHMSQYRFDLVSQDIYEFIWNEYCD 737

Query: 426 RYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            Y +  K     ++ + +R + + YV +  +          +P +   I+  +    + +
Sbjct: 738 WYVELAKSSLNDESVSAERKAQIRYVLLNCLEVAMRFTHPIMPYITESIWQTIAPIIDKK 797

Query: 485 CFQSLDQRLKP 495
              S+     P
Sbjct: 798 ATDSIMTAAFP 808



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 22/170 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I+          H+GH +   I D L R+HR+ G + L+  GTD  G       
Sbjct: 43  KQQSFSIALPPPNVTGSLHMGHGFNNAIMDTLTRYHRMLGENTLWQPGTDHAGIATQMVV 102

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    K++  +       +R  R +   +D S + F  T +   
Sbjct: 103 ERQLNAQGIKRHDLGREKFLEKIWEWKAESGGNITRQIRRLGSSVDWSRERF--TMDDGL 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
            +  + ++ ++ + G IY+G     +  + +   +D EV    +      
Sbjct: 161 SNAVKEVFVRLYEDGLIYRGKRLVNWDTKLQTALSDLEVENHDEKGSLWH 210


>gi|313837330|gb|EFS75044.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927996|gb|EFS91827.1| leucyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971714|gb|EFT15812.1| leucyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907122|gb|EGG26888.1| leucine--tRNA ligase [Propionibacterium sp. P08]
          Length = 826

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SKERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIGTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKGSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLLDD- 211

Query: 181 ESHPEFILPIERRNEVISF 199
               E   P    +   ++
Sbjct: 212 MDQIEGKWPERVLSMQRNW 230



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 58/300 (19%), Positives = 114/300 (38%), Gaps = 40/300 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVI 263
             S      G     D    M  ++D+   ++       +     A+    + P   ++ 
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVDSSWYFMRYCSPHYDEGPFDAEAVRRWMPVAQYIG 545

Query: 264 GKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  +
Sbjct: 546 GVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLGK 604

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            I+E GVDA+R  ++      +D   D   +                 R  S +  D D 
Sbjct: 605 QIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQR----AWRVASEVTSDPDV 658

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                   T+SD ++  V  R + +I E +++   +  +A+V+ LV+   +  D+     
Sbjct: 659 ------DLTQSDATLRQVTHRSIADITELLESGRYNVVVARVMELVNATRKAIDS----- 707

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
                            E +   A  L    P LA ++++IL +     N  + + DQ+L
Sbjct: 708 -------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEILGLEPSVANSHWPTADQKL 760


>gi|227833699|ref|YP_002835406.1| Valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454715|gb|ACP33468.1| Valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 923

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 72/412 (17%), Positives = 131/412 (31%), Gaps = 35/412 (8%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
            IR   +      + +   +   G   +        L  + +    E      G      
Sbjct: 349 EIREALREQGRIVKEIRPYVHSVGHSERSGEPIEPRLSLQWFVAV-EKMAKMSGDAVREG 407

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              +     E  +F             +      +PI    E     +  +  L    + 
Sbjct: 408 DTTIHPKSLEPRYFEWVDDMHDWCISRQLWWGHRIPIWYGPEGEDGQRD-IVCLGPDEEA 466

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            +  ++   DP  ++  W  +     +T G+ +       KF+P ++ V   DIL F   
Sbjct: 467 PEGYVQ---DPD-VLDTWFSSALWPFSTMGWPEKTA-DLEKFFPTNVLVTAYDILFFWVA 521

Query: 274 YWPAFLLSANL----------------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
               F   A                  P             +G K+SKSLGN IDP++ +
Sbjct: 522 RMMMFGTFAGAHTPELLGEGKNGRPQVPFTDIYLHGLVRDEQGRKMSKSLGNGIDPMDWV 581

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G DALR+ L R    G D     D        + A  + N  ++   M        +
Sbjct: 582 RDYGADALRFTLARGANPGVDLPLAVDA--AAAGRNFATKLFN-ATKFALMNGAGV-AKL 637

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK--- 432
           P   A T++D  IL     V  ++   + +    +A   +   V +   D Y +  K   
Sbjct: 638 PARDALTDADRWILDRSEEVRAKVDVYLDDYQFAKANELLYHFVWDELCDWYLEIAKTQI 697

Query: 433 PWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           P +    + +  +   T   V   V+  +  LL   +P +   ++  L   +
Sbjct: 698 PRDFDGASAEEQATGRTTQIVLGRVLDLVLRLLHPTMPFVTEVLWKALTGGE 749



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 58  SEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTK 117

Query: 62  AQNA----------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+++                R + D +D S + F  T + 
Sbjct: 118 VEARLREQEGKKRWDYEREEFINKVWEWKEEFGGTIQNQMRAIGDSVDWSRERF--TLDD 175

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D+G IY+      +S   E   +D EV  
Sbjct: 176 GLSRAVQTIFKTLYDEGMIYQANRLVNWSPVLETAVSDIEVVY 218


>gi|326559779|gb|EGE10189.1| leucyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 878

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I DVL+R++R  G +V+   G D  G     A
Sbjct: 35  TDKPTRYMLSMFPYPSGKLHMGHVRNYAITDVLSRYYRQKGYEVMQPMGWDAFGLPAENA 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R+    L +S D      T    ++   + L+ ++  KG +
Sbjct: 95  AIANAVAPAKWTFDNIANMREQLKALGLSIDWSREFATCTPEYYRWEQWLFLQLYKKGLV 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            V+  +   Y+F+++ Y D+LL  
Sbjct: 155 YKKLATVNWDPVDNTVLANEQVVDG----RGWRSGAIVEKRDIPMYYFKITDYADELLDD 210

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++    +   +    +       G+
Sbjct: 211 LKTLEGHWPKQVLSMQQNWIGRSQGM 236



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+IE+ G D +R + +      +   +    LK   N      +  
Sbjct: 632 EKMSKSKNNGVDPQEIIEQYGADTVRLYTLFTAPADQTLEWSDSALKGPHN--FIKKVWR 689

Query: 361 LVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            V   +S I     + +       ++  +++       + +I  ++ ++  ++  ++ ++
Sbjct: 690 TVGEHLSAIQNHQSNDLTIHKDTLSKDAKNLRRKTHETIAKIDVSLGEHLALNTPVSSLM 749

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +E      + KP      N D A+       E I  L  LL  + P +   + + L 
Sbjct: 750 ELCNE----IASFKP----TDNNDIAAR-----HEAIVALLTLLSLYAPHVGEYLLEALK 796

Query: 479 VADENRCFQSLDQ 491
           +    + F  LD+
Sbjct: 797 IDARTQAFPVLDK 809


>gi|313792292|gb|EFS40393.1| leucyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
          Length = 826

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL G DVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGFDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTGLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLLDDI 212

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
                      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 213 ------DQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|228470963|ref|ZP_04055808.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
 gi|228307360|gb|EEK16374.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3]
          Length = 1137

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 106/299 (35%), Gaps = 8/299 (2%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P +   E    +      +         G +       ++ VW D+         Y  
Sbjct: 571 FTPGDYSEENYDKIDLHRPYVDEITLVAQDGKRPMRRESDLIDVWFDSGAMPFAQVHYPF 630

Query: 247 NPDGS--KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    K +PAD    G D     F  ++  A +   ++     + +   +   G K
Sbjct: 631 EHREEVESGKVFPADFIAEGVDQTRGWFFTLHAIATMTQGSIAFRNVLVNGLVLDKDGNK 690

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP  VI++ G D LR++++      ++  +D  G+++              
Sbjct: 691 MSKRLGNAVDPFGVIQQYGSDPLRWYMITNANPWENIRFDPKGVEEVSRKYFGTLYNTYQ 750

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   L  +D  +         E D  ILS  + +++E+   + +     A   + + 
Sbjct: 751 FFALYGNLDGFDPAVAQIPYADRPEIDRWILSRLNSLIKEVDGKLGSYDPTPAGRAIENF 810

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+E   + Y    +      +  D   +      + +  +A L+    P  A++++  L
Sbjct: 811 VTEHLSNWYVRLSRKRFWAGSMTDDKLSAYQTLYQCLSVVAQLMAPIAPFYADRLYRDL 869



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 12/113 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D++ R+  + G  V    G D HG  +    +     TK  
Sbjct: 49  PPSANGMPGIHHVIARSIKDIICRYKTMHGYRVDRRAGWDTHGLPVELGVEKKLGITKDA 108

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +             IS  ++ +T  K                G      + 
Sbjct: 109 IGKT------------ISVAEYNQTCRKEVMKYTAEWESLTKQMGYWVDMEHP 149


>gi|163743397|ref|ZP_02150777.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383391|gb|EDQ07780.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 857

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHSVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T ++ ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYANIDTMVEQMKPLGLSLDWSRMFATCDESYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    +G         V+  E   +FF++S Y D+LL+  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQV----EGGRGWRSGALVERRELTQWFFKISDYSDELLTAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   +    E       GL+
Sbjct: 206 DTLENWPAKVRLMQENWIGKSRGLQ 230



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 29/175 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 628 KMSKSKNNVVDPLHIISSYGADTARWFVLSDSPPERDVEWTASGAEAAHKH--LNRVWNL 685

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M           PGA    DE +L    + ++++  +++    + A+A++ S  
Sbjct: 686 CDRIGEM----------DPGASGNGDEDLLREMHKAIRDVTLSIETFGFNAAIAKLYSFT 735

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +             L K+    A+       + I  LA L+    P LA  I++ 
Sbjct: 736 N------------TLAKSKAGTAAQ-----KQAIMTLAQLMSPMTPHLAEDIWNH 773


>gi|297526739|ref|YP_003668763.1| isoleucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255655|gb|ADI31864.1| isoleucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 1058

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 112/290 (38%), Gaps = 17/290 (5%)

Query: 218 IKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHA 272
             I   P      +M VW D+  ++    G+ +            D  V G D +R +  
Sbjct: 510 CPICGKPMKRVPDVMDVWFDSAISFYAAKGHPEKLSLKDIIL---DFIVEGHDQIRGWFF 566

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
               A +L         V  HGF L + G ++ KSLGN +   E IE  G D LR+++  
Sbjct: 567 SLLRAGVLGFQSKPYNTVLVHGFALDEHGREMHKSLGNYVGTDEAIERAGRDPLRFWV-S 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SD 387
           +    +D  +   G+ + +  DL       V  S  M L  YD +      + E     D
Sbjct: 626 QNTVWEDLRFSWRGIDE-IRRDLGIAWNTFVFASTYMNLDKYDPLQHRIDDYREHLRYED 684

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
           + ILS  + V++++ EN++   IH A   +   + E     Y    +P    + N     
Sbjct: 685 KWILSRINSVVKKVTENLEKYYIHEAARMLRKFIVEDVSHWYIRLIRPRVWVEENTPDKL 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
               V   V+ +   ++  F P LA KI+  +F   +     S+     P
Sbjct: 745 AAYTVLYYVLEKWLRMMAPFTPFLAEKIYQEVFRKADPEQPISIHLLDWP 794



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 21/172 (12%)

Query: 13  IAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------ 65
             YP+   PHIG A+   + D++ R+ R+ G +V    G D HG  I    +        
Sbjct: 50  PPYPSGEVPHIGTAWNKTLKDIVLRYKRMRGYNVFDRPGYDCHGLPIEVKIEQKLGVKVK 109

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWK 111
                           K     N ++       L +  D      T    + +    L K
Sbjct: 110 REIEEKIGVDKFVNECKKLALNNIKSLTKWFKELGVFMDWENPYLTLRDEYIEAGWWLIK 169

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           K +++G + +     ++  R      + EV              PV+  E E
Sbjct: 170 KAAEQGLLDREERVVYWCPRCSTTLAEYEVEYKVLTDPSIYVKFPVRGKERE 221


>gi|195125265|ref|XP_002007102.1| GI12751 [Drosophila mojavensis]
 gi|193918711|gb|EDW17578.1| GI12751 [Drosophila mojavensis]
          Length = 871

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 5/187 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+ +   YP+   H+GH     I+D +ARFHR+ G +V    G D  G     AA 
Sbjct: 61  QNKYYVLSMFPYPSGNLHMGHVRVYTISDAVARFHRMCGKNVFQPIGWDSFGLPAENAAN 120

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  +N    +   + L  S+D    + ++   ++   + L+  +  +G  Y+
Sbjct: 121 ERGVAPAEWTKKNIAQMKQQLERLGCSFDWAHELSSSSPEYYKWTQSLFLMLHKRGLAYQ 180

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    D++V          A+   V+    + +F R +AY  +LL   +
Sbjct: 181 NEALVNWDPVDKTVLADEQVDANGCSWRSGAK---VEKKLLKQWFIRTTAYAKQLLDGLD 237

Query: 182 SHPEFIL 188
                  
Sbjct: 238 DPTLRDW 244



 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/365 (12%), Positives = 105/365 (28%), Gaps = 63/365 (17%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           + + +      Y    +          +P+  +   +S         SL       G   
Sbjct: 395 KLQDWLISRQRYWGTPIPIVHCAKCGAVPVPEQQLPVSLPPRDAGKDSLLCDCPKCGQSG 454

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWP 276
                  M  ++D+   YL      +  +   AK    F P DL++ GK+    H  Y  
Sbjct: 455 AQRETDTMDTFVDSSWYYLRYLDAHNPNEIFDAKLANNFMPVDLYIGGKEHAVLHLYYAR 514

Query: 277 AFLLSAN--------LPLPKKVFSHGFI-------------------------------- 296
                 +         P  + +     +                                
Sbjct: 515 FMNHFLHSCGLSPTSEPFSRLLVQGMVMSRSYRVKGSGRYVRESEVEIVNAKKNQALLKA 574

Query: 297 -----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                +   EK+SKS  N ++P ++  E G D  R  ++ ++A      +        +N
Sbjct: 575 TKEPVVMSWEKMSKSKLNGVEPDDIFNEYGTDTARLIILADVAPTSHRNWSSATFPGILN 634

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLI 410
                 +     ++     +  + +     AF   D  +    +  ++    N +    +
Sbjct: 635 WQKRLWLTLDDFKAAREEQQPEEQVDTASEAFLAEDAKLFDARNFYVKGATFNYRHAHQL 694

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             A++++  L +             L++T P     +       +    I+L    P  A
Sbjct: 695 SVAISKMQGLTN------------SLRRT-PKHIQRLGKQFERALAAQIIMLAPMAPHFA 741

Query: 471 NKIFD 475
           ++++ 
Sbjct: 742 SELWS 746


>gi|190571143|ref|YP_001975501.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|238064874|sp|B3CLT1|SYL_WOLPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190357415|emb|CAQ54849.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 819

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+ + H+GH     I DV+AR+ R  G +VL   G D  G     AA++  +
Sbjct: 30  YVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPAENAARDNNI 89

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               +   N  N R     + +SY  D  + T E  ++   +  +      G  Y+    
Sbjct: 90  NPAAWTQDNIDNMRTQLKSIGLSYNWDRELSTCEPDYYKHEQKFFLDFLKHGLAYRKESW 149

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D+    +++V  G            V+  +   +F +++ + + LL   +S   
Sbjct: 150 VNWDPVDQTVLANEQVVDGKG----WRSGAVVEKRKLFQWFLKITDFAEDLLHCLQSLKN 205

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 206 WPEKVKTMQERWIGKSEG 223



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 94/291 (32%), Gaps = 66/291 (22%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AF 278
              + ++   +        + +      + P D ++ G +    H +Y            
Sbjct: 475 FDTFFESSWYFAAFCSENKSINKDTCNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCG 534

Query: 279 LLSANLPL----PKKVFSHGFILHKG------------------------EKISKSLGNV 310
                 P      + +  H     +                         EK+SKS  N 
Sbjct: 535 YFDVKEPFSTLITQGMVCHITYKDENGKWLFPEEAKELIAKGAKIQVGKVEKMSKSKKNT 594

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           +DP  +IE+ G D  R F++ +    KD  +  DG++        N +  +V + +  + 
Sbjct: 595 VDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDGVEGCFR--YINKLWRMVVQ-LRTVN 651

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL---AQVISLVSEVDRY 427
             YD                     ++L  + ++++N  ++  +    ++ +L++E+D  
Sbjct: 652 IHYDNENIVGKLL-----EYRKKIHKLLHGLTDDLENCRLNCVVAKFREMTNLIAEID-- 704

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                             T   +  E I  L  +++  +P LA  ++  + 
Sbjct: 705 ----------------VKTGKSLIDEGICILIRVIEPLMPHLAENLWQEIG 739


>gi|326333915|ref|ZP_08200146.1| leucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948276|gb|EGD40385.1| leucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 827

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 11/213 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   H+GHA    + DVLAR+  L G DVL   G D  G     AA  
Sbjct: 39  EKRYALTMFPYPSGDLHMGHAEVTALHDVLARYWWLKGFDVLNPIGWDSFGLPAENAAIK 98

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +   N     +      IS+D    + T++  ++   + ++ K+ + G  Y+ 
Sbjct: 99  RNENPAGWTYANIETQAESFKRYGISFDWSRRLHTSDPEYYKWTQWIFLKLYEAGLAYRK 158

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   +   ++FR +AY ++L +  ++
Sbjct: 159 KSPVNWCPNDQTVLANEQVVNGE----CERCGATVTKRDLTQWYFRTTAYAEELYNGLDT 214

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                L      +V++  ++ +     +   F+
Sbjct: 215 -----LQDTWIGKVVNMQRNWIGRSEGAHVDFE 242



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 104/283 (36%), Gaps = 38/283 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            ++      G     D    M  ++D+      YL+ T          A+ W P D ++ 
Sbjct: 489 WVNVSCPKCGGPATRDSD-TMDTFVDSSWYFLRYLSPTDETQAFSSEAAREWGPVDFYLG 547

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   F         +  + P      S G +++ G+K+SKSLGN ++  +
Sbjct: 548 GDEHAVLHLLYARFFTKALRDIGLIDWDEPF-SAYLSQGKVINGGKKMSKSLGNGVNLSD 606

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+EE GVDA R  LV       +   D   +    +A        L     S     +D 
Sbjct: 607 VLEEFGVDATRLTLVFASPP--EDNIDWADVSPGGSAKFLQRAWRLAGDVTSEPGVSFD- 663

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    + D ++  V  + + E  + +++   +  +A+V+ LV+   +  D+     
Sbjct: 664 ---------DGDVALRRVTHKTVAEAEQLIESYRFNVVVARVMELVNATRKAIDS----- 709

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                            E    +AILL    P  A ++++ L 
Sbjct: 710 -------GVGPADPAVREAAETVAILLSLVAPYTAEEMWERLG 745


>gi|254780802|ref|YP_003065215.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040479|gb|ACT57275.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 869

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 8/210 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K ++     YP+   H+GH    +I DV+ARF R  G  VL   G D  G     A
Sbjct: 31  KNKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A+   V  K++  QN +  R     + +S D   DF  T +  ++   ++L+        
Sbjct: 91  AREHNVHPKMWTYQNIKVMRKQLQSIGLSIDWSKDF-ATCDVDYYHCQQLLFLDFMKHNV 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           I +      +   ++    +++V  G           PV+      +FF++S    +LL 
Sbjct: 150 IVRKTAQVNWDPVEQTVLANEQVING----RGWRSDAPVEQRSLPQWFFKISDLSQELLD 205

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLS 208
             E+  E+   ++   +       G++   
Sbjct: 206 SIETLSEWPEKVKIMQKNWIGRSEGMEIRW 235



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/304 (21%), Positives = 120/304 (39%), Gaps = 73/304 (24%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           M  ++D+   Y+           +K    +++P D ++ G +    H +Y   F      
Sbjct: 504 MDTFVDSSWYYMRYMTPHAKDPINKELVRQWFPVDQYIGGIEHAVLHLLYARFFAHILKK 563

Query: 285 -------PLPKKVFSHGFILHKG------------------------------------- 300
                     K++F+ G ++H+                                      
Sbjct: 564 IGYIEIDEPFKRLFTQGMVVHETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKV 623

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                EK+SKS  NVIDP++VI+  G D  R F++ +    +D  +   G+         
Sbjct: 624 VIGPLEKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPPDRDIIWSNKGVDSTY--QFI 681

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I  L+          Y+       + T+ D S++S  ++ L+ I EN QN   ++A+A
Sbjct: 682 QQIWRLI----------YNAKDELQTSSTKKDISLISKSTKFLERIEENYQNLSFNKAVA 731

Query: 416 QVISLVSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  LV+ + +   +  K    KK+N DR ST+ Y    ++ +L I++   +P LA + +
Sbjct: 732 NIHELVNVISKPLMEIAK----KKSNADRISTIRY----ILEKLIIMMSPMIPHLAEECW 783

Query: 475 DILF 478
            +L 
Sbjct: 784 QLLG 787


>gi|194883432|ref|XP_001975805.1| GG20362 [Drosophila erecta]
 gi|190658992|gb|EDV56205.1| GG20362 [Drosophila erecta]
          Length = 1049

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 128/425 (30%), Gaps = 97/425 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 453 PICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWY-HWMDGIRDW 511

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 512 CVSRQ-LWWGHRIPAYHVSFTDPSLQTGSNDDEQYWIVARSEAEALTKAAERFGVDASKI 570

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ D     K  F+P  L   G DIL F    + +  
Sbjct: 571 VLKQDEDVLDTWFSSGIFPFSVFGWPDQTKDLKT-FYPTSLLETGHDILFFWVARMVFFG 629

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 630 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPR 689

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + +         N + N
Sbjct: 690 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVLG--YRFFCNKLWN 747

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++        +D  +    A  + D  ILS  +  ++      ++     A +   
Sbjct: 748 ATKFALLYFTGSDKFDTELSASEAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACY 807

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D Y +  KP   +  + ++ +         +     LL  F+P +  +++  
Sbjct: 808 AFWLYDLCDVYLECLKP-IFQSGSEEQQAAARRTLYVCLDYGLRLLSPFMPFITEELYQR 866

Query: 477 LFVAD 481
           L  A+
Sbjct: 867 LPRAN 871



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 42/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 130 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 189

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    L  SYD      T +       
Sbjct: 190 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPMLCRAV 249

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 250 TEAFVRLHEEGSIYRSSRLVNWSC 273


>gi|87302693|ref|ZP_01085504.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
 gi|87282576|gb|EAQ74534.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
          Length = 883

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 79/201 (39%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 48  DTFYALSMFPYPSGNLHMGHVRNYVITDVIARVQRLRGRQVLHPMGWDAFGLPAENAAIE 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    + D N    R     L   I +D  + T    ++   + L+ +  + G  Y+ 
Sbjct: 108 RGVDPGDWTDANIAQMRAQLQRLGLSIDWDREVATCHADYYRWTQWLFLQFHEAGLAYRK 167

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V    +G+ + +    V+  +   +F R++ Y + LL   + 
Sbjct: 168 EATVNWDPIDQTVLANEQV--DGEGRSWRSGAR-VEKRQLRQWFLRITDYAEALLDDLDQ 224

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +           +G
Sbjct: 225 LDGWPERVRTMQSNWIGRSAG 245



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 98/300 (32%), Gaps = 61/300 (20%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              Y          + S A  W P D +V G +    H +Y   F   
Sbjct: 519 DTMDTFICSSWYYLRYSDPHNTQLPFERSAADRWLPVDQYVGGIEHAILHLLYSRFFTKV 578

Query: 280 ------LSANLPL---------------------------------PKKVFSHGFILHKG 300
                 LS + P                                  P+       +    
Sbjct: 579 LRDRGLLSFDEPFQRLLTQGMVQAITYKNPQTGKYVAPADVADPADPRDPIDGERLDTFY 638

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        +  
Sbjct: 639 EKMSKSKYNGVDPAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLWR 696

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ--NQLIHRALAQVI 418
           LV  +V+  L+          A T++++ +       +  I +++   +   + A+++++
Sbjct: 697 LVDGAVARGLRLPTPPGAPAEASTQAEQELRRAVHGAIAAIDDDLAPGHYQFNTAVSELM 756

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +             +     + A     V  E +  L ILL  F P LA +++  L 
Sbjct: 757 KLSN-------------VMAAQLEAAGE--PVASEALSALVILLAPFAPHLAEELWQRLG 801


>gi|17510661|ref|NP_493377.1| Valyl tRNA Synthetase family member (vrs-2) [Caenorhabditis
           elegans]
 gi|75025236|sp|Q9U1Q4|SYV_CAEEL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|6425518|emb|CAB60428.1| C. elegans protein Y87G2A.5, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1050

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 126/372 (33%), Gaps = 53/372 (14%)

Query: 161 EEEGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
               +      +    +  Y        E  LP E         +  L   +   +  + 
Sbjct: 497 SSRDWCISRQLWWGHRIPAYYISFADGREQPLPEENYWVSARTEQEALAKAAQKFQVPEA 556

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
            I +  D   ++  W  +        G+ D        F+P  +   G DIL F    + 
Sbjct: 557 EILLKWDED-VLDTWFSSGMWPFAVFGWPDATK-DMDLFFPGAVLETGHDILFFWVARMV 614

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI----------------- 317
           + A  L+  LP  + +         G K+SKSLGNVIDP++VI                 
Sbjct: 615 FMAQELTGKLPFKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGISLNDLQAQLLGGNL 674

Query: 318 --------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                E GVDALR+ L+   + G+D   + D L+        N 
Sbjct: 675 DEKEIAVAKEGQARDYPDGIPECGVDALRFALLSYTSQGRDI--NLDVLRVHGYRKFCNK 732

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           +  +V  +++ I    +            T +D  ILS  ++ ++E  E ++     +A 
Sbjct: 733 LWQVVRFALARISDKPEQKPTFEINLKSATPTDLWILSRLAKAVKETNEALKAYNFTQAT 792

Query: 415 AQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
               +       D Y +  KP  L   N       + V  + I     L+   +P ++ +
Sbjct: 793 TVTYNFWLYDFCDVYVETIKP-VLYGDNTTLRQVAISVLHKCIDTGLRLISPLMPFISEE 851

Query: 473 IFDILFVADENR 484
           ++  +   D++ 
Sbjct: 852 LWQRMPRLDDSD 863



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 19/143 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             +           H+GHA    + D + RF+R+ G   LF  G D  G       +   
Sbjct: 120 FTVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVVVEKRL 179

Query: 66  --------------GVTTKVFVDQNSRN--FRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                             +V+  +N +     D    L   + +D  + T + +      
Sbjct: 180 KRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKMCRAVT 239

Query: 108 ILWKKISDKGDIYKGCYSGWYSL 130
             + ++ + G IY+      +S 
Sbjct: 240 EAFIRMHESGTIYRSNRLVNWSC 262


>gi|157364698|ref|YP_001471465.1| leucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|172045994|sp|A8F8B7|SYL_THELT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157315302|gb|ABV34401.1| leucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 815

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 84/231 (36%), Gaps = 18/231 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y+     YP+   H+GH    +I D +AR+ R+   +VL   G D  G     AA  
Sbjct: 32  PKYYMLVMFPYPSGTLHVGHVKNYVIGDAVARYKRMRAYNVLHPFGYDAFGLPAENAAIE 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +   N    R     L ISYD    + T  + ++     ++ K+ + G  YK 
Sbjct: 92  RKIHPKDWTLNNINIIRRQIKKLGISYDWNREVITCLESYYKWTEWIFLKLYEAGLAYKK 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +  +      +++V  G           PV     E +FF+++ Y ++LL   + 
Sbjct: 152 KAAVNWCPKCMTSLANEQVKDG----RCERCDTPVTIKHLEQWFFKITDYAERLLKDLDK 207

Query: 183 HPEFILPIERRNEVISFVKSG------------LKDLSLSRKTFDWGIKIP 221
              +   ++           G              ++  +R    WG+   
Sbjct: 208 LTGWPEHVKTMQRNWIGESKGAKISFKVEESEMNIEVFTTRPDTLWGVTFM 258



 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 117/345 (33%), Gaps = 43/345 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + E+ G            L Y              N+            
Sbjct: 423 QRYWGAPIPIVYCEKCGMVPVPEKSLPVQLPYDVEFLPTGQSPLMLNDEFRKTSCPKCGG 482

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
              R           D              Y+                W P D +V G +
Sbjct: 483 PALRDA---------DTMDTFVDSSWYFLRYVNPDRDDVPFVKEDVDHWLPVDQYVGGVE 533

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y             LS + P  + +F+ G I   G K+SKS GNV+ P E+I+
Sbjct: 534 HAVLHLLYSRFITKVLYDLGYLSFDEPF-ENLFTQGMIYKDGAKMSKSKGNVVSPDEMID 592

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D LR +++      +D  ++  G++         G+   + R+ S++ +       
Sbjct: 593 RYGADTLRMYILFMGPPERDAEWNDAGIE---------GVYRFIRRAWSLMDQIISLPDN 643

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDA--QKPWE 435
               F E ++ +       L+++ ++M+     +  ++ ++ LV++   Y D   Q  W 
Sbjct: 644 QNQVFAEEEKHLRRKLHISLRKVTQDMEGGFKFNTVVSSLMELVNDAYDYIDNLPQHRWN 703

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +K            +  E+ +   +++  F P  A +++  +  +
Sbjct: 704 IK------------LLKELAKNFVLMISPFAPHFAEELWQRMGYS 736


>gi|58584862|ref|YP_198435.1| leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311620|sp|Q5GS31|SYL_WOLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58419178|gb|AAW71193.1| Leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 865

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ K Y+     YP+ + H+GH    +I DV+AR+ R  G +VL   G D  G     AA
Sbjct: 25  EQGKCYVLEMFPYPSGKIHMGHLRNYVIGDVIARYKRACGFEVLHPIGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           ++  V    +  +N  N R     + +SY+    + T E  ++   +  +     +G +Y
Sbjct: 85  RDNNVNPAAWTKENIDNMRAQLKSIGLSYNWERELSTCEADYYKHEQKFFLDFLKQGLVY 144

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  E   +F +++ + + LL   
Sbjct: 145 RKKSWVNWDPIDQTVLANEQVVDGKG----WRSGAIVEKRELSQWFLKITDFAEDLLECL 200

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   ++   +       G
Sbjct: 201 QGLENWPEKVKMMQDRWIGKSEG 223



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 104/304 (34%), Gaps = 79/304 (25%)

Query: 234 ALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDILRFHAIYWP--------AFLLSAN 283
             + Y       +      A  +F P D ++ G +    H +Y              +  
Sbjct: 502 ESSWYFAAFCSENKSIDKNACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFNVK 561

Query: 284 LPL----PKKVFSHGFILHKG------------------------EKISKSLGNVIDPIE 315
            P      + +  H     K                         EK+SKS  N +DP  
Sbjct: 562 EPFSTLITQGMVCHVTYKDKNGKWLFPEEAKRLITQGAKIQVGKVEKMSKSKKNTVDPNF 621

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-- 373
           +IE+ G D  R F++ +    KD  +  DG++    +   N +  +V +   +++ +   
Sbjct: 622 IIEKYGADTARLFVLSDTPPEKDMEWSNDGVEG--CSRYINKLWRMVMQFKPVVILNQSP 679

Query: 374 -----DGMIPTPGAFTES----DESI-------LSVCSRVLQEIRENMQNQLIHRAL--- 414
                D  I      + +    D+++            ++L  + ++++N  ++  +   
Sbjct: 680 VKQVADTEIQKEDMLSHAGMIPDKNVTGKFLGYRKKIHKLLHGLTDDLENCRLNCVVAKF 739

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            ++ +L++E+D                    T   +  E I  L  +++ F+P LA  ++
Sbjct: 740 REMTNLIAEID------------------VKTGKSLINEGICILIRVVEPFIPHLAESLW 781

Query: 475 DILF 478
             + 
Sbjct: 782 REIG 785


>gi|26554335|ref|NP_758269.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747446|sp|Q8EUN9|SYI_MYCPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|26454344|dbj|BAC44673.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 900

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 132/343 (38%), Gaps = 21/343 (6%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           +   +    +E    R   +   +   Y+     IL  +  N ++  +     +   +  
Sbjct: 442 KIKEMVLNRQEWCISRQRIWGVPICIIYDKDYNPILDPKLLNNIVDILNDEGINAWYNED 501

Query: 213 TFDW------GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
              +        K       IM VW D+ T+Y            +    +PADL+  GKD
Sbjct: 502 AKYFLTDSYNTSKKYIKETDIMDVWFDSGTSYSVLQ--------ADKLGYPADLYFEGKD 553

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++    +       P  + +     +   G K+SKSLGN+IDP++V +E G D 
Sbjct: 554 QFRGWFNSSLITSVAAFKKSPYKELLTHGFVLDENGNKMSKSLGNIIDPLQVCKEYGADV 613

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           LR ++   +   KD    KD + +  NA+L   I N + R +   L  ++        ++
Sbjct: 614 LRLWVA-SVDFSKDVSISKDIIAQ--NAELYRRIRNTLFRFILGNLNGFNLKKLRGAKYS 670

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDRYFDAQK-PWELKKTNPD 442
           E+D  +LS  S  ++ I+         + +  V  ++      YFD  K P   +K + +
Sbjct: 671 EADLYVLSCLSNDIKTIKACYDKYDFKQIVKIVSKNVADLSSWYFDYIKDPLYCEKEDNE 730

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +   +     +++     +L   +P    + ++     D+ + 
Sbjct: 731 QRIAIQATLYQLLDSYLRILAPIIPHTCEEAYEFFDKKDKQKS 773



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K      I+    Y N   H GHA   I+ D++ RF    G    +  G D HG  I   
Sbjct: 46  KSNTPFIIADGPPYANGDLHTGHALNKILKDIILRFKASVGFYTKYIPGWDTHGLPIEQE 105

Query: 60  -----------KAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                      +         K F  +N    RD    L I    D+   T +  +    
Sbjct: 106 MAKRGLNKNANQTITEKRKNCKNFAIENVYKQRDQFRRLGILSEMDEIYVTCDLDYVIRQ 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ K+  KG IY+     ++S   +    D E+  
Sbjct: 166 IKIFNKMLSKGLIYQDLKPVYWSWSSQTALADAEIIY 202


>gi|317181247|dbj|BAJ59033.1| leucyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 806

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LEDHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 108/377 (28%), Gaps = 38/377 (10%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVARERIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFTQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+          + +  S       K     +   GA   + + +     +  +  
Sbjct: 612 NDNALEGTHR--FIKRLYDKASAINPTTSKPEFKEVSLNGAEKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ +                   A     V  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALS------------------AQNNERVLCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILF 478
           L+  +P  A ++ + LF
Sbjct: 712 LEPIIPHTAWELSERLF 728


>gi|317011778|gb|ADU85525.1| leucyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 806

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  + +  +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFEALGFSFAKNREFATSDPNYTEFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   ++ G     
Sbjct: 382 WSNLSSSVAREQIIAYFEKENLGKKVINYRLQDWGVSRQRYWGAPIPMIHCKDCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFTQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P + ++ G +    H +Y   F         + 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVNTYIGGIEHAILHLLYARFFTKALRDLGYID 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    + I            +  E+++         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKANAITPTTSKPEFKEASLNEAEKPARKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ ++                  A     +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALN------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|208435427|ref|YP_002267093.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208433356|gb|ACI28227.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 806

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 106/377 (28%), Gaps = 38/377 (10%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         + 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYIH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKNGTKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDSALEGAHR--FIKRLYDKANAITPTTSKPEFKGVSLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ ++                  A     +  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALN------------------AQNNERILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILF 478
           L+  +P  A ++ + LF
Sbjct: 712 LEPIIPHTAWELSERLF 728


>gi|163750100|ref|ZP_02157343.1| valyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161330157|gb|EDQ01139.1| valyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 971

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 133/416 (31%), Gaps = 103/416 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  ++      +   ++     +P +  N + +     + D  +SR+   W
Sbjct: 374 IEPLLTDQWYVSVAPMAKTAMEAVKNGDIKFVPQQYEN-MYNSWMRDINDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                             + ++  W  +     +T G+  
Sbjct: 432 GHRIPAWYDEAGKVYVGRDEAEVRAKHKLDDSVVLRQDKDVLDTWFSSALWTFSTLGWPK 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           +    KA   P D+ V G DI+ F         +           +P      +      
Sbjct: 492 DTAELKAFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 VGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTANLMQPKLAAKIEKSTRKEFADGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--DYDGMIPT 379
            DALR+ L    + G+D  +D   L         N I N  SR V M  +    D     
Sbjct: 611 TDALRFTLASMASTGRDISWDMKRLDG--YRSFCNKIWN-ASRYVLMNTEVQSEDQHSNA 667

Query: 380 PGAF-----------------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           PG                   + +D  I+ + ++ ++   E+M+N     A   +     
Sbjct: 668 PGEPLDCGQILTDGKPGEMERSLADRWIIGLFNQTVKAFDEHMENYRFDLAANTIYEFTW 727

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               D Y +  KP     T   +  T  +  V V+ Q+  L+   +P +   I+  
Sbjct: 728 NQFCDWYLELTKPVIQTGTEAQKRGT-RHTLVTVLEQMQRLMHPMMPYITETIWKR 782



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNAGVTTK----------VFVDQNSRNFRDMAD---------VLDISYDDFIRTTEKRH 102
            +      +           F+D+     ++               + +D    T ++  
Sbjct: 90  VERKLAAEEGKTRHDLGRDKFIDKIWDWKKESGGTITKQLRRLGASVDWDRERFTMDEGM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  + ++ ++ +   IY+G     +        +D EV              P+
Sbjct: 150 SEAVQEVFVRLYEDDLIYRGKRLVNWDPALHTAISDLEVESKEKQGSMWHFRYPL 204


>gi|288800157|ref|ZP_06405616.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333405|gb|EFC71884.1| isoleucine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 1192

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 110/282 (39%), Gaps = 14/282 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y         K   +PAD    G D     F  ++
Sbjct: 651 KAMTRETDLVDVWFDSGAMPYAQVHYPFENKDMIDKGLAFPADFINEGVDQTRGWFFTLH 710

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +  KG K+SK +GNV++P ++IE+ G D++R++++    
Sbjct: 711 AIATMIFDSVAFKNVISTGLVLDSKGNKMSKHVGNVVNPFDMIEKYGADSVRFYMMTNSE 770

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +DK+G+ + V       + N  S        D   +           E D  IL
Sbjct: 771 PWDNLKFDKEGVDE-VRRKFFGTLYNTYSFFALYANVDGFSFAEKEVPLNDRPEIDRWIL 829

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           S    +++ + + +      +A   + + V++   + Y   + ++ W   K       + 
Sbjct: 830 SCLHTLIRNVDKELSEYSPTKAGRLIDAFVNDDLSNWYVRLNRKRFW--GKEMSTDKLSA 887

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  +  ++ LL  F P  A++++  L  A     F S+
Sbjct: 888 YQTLYTCLETISKLLAPFAPFFADRLYCDLMSATHREAFDSV 929



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 50/166 (30%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PEFVFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMKGFQVHRKAGWDTHGLPVELGVEK 100

Query: 65  A----------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEK 100
                                      +  V + +  +R++ + +    D      T E 
Sbjct: 101 ELGITKKDIDNKASAKYISVEEYNHKCRENVMKFTEEWRELTEKMGYFVDLEHPYITYEN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K+   KG +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLKQFYTKGYLYKGYTIQPYSPGAGTGLSSHELNQPGC 206


>gi|297562270|ref|YP_003681244.1| leucyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846718|gb|ADH68738.1| leucyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 831

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 87/235 (37%), Gaps = 12/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R + YI    AYP+   H+GHA    I DV++R+    G +VL   G D  G     AA
Sbjct: 42  TRPRSYIVDMFAYPSGDLHMGHAEAYAIGDVISRYRLQRGDNVLHPVGWDSFGLPAENAA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            IS D    + T++  ++   + L+ +  ++G  Y
Sbjct: 102 IKNNSHPAEWTYANIETQAASFRRYGISVDWSRRLHTSDPEYYRWNQWLFTRFFERGLAY 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  +D+    +++V +G            V       ++FR++ Y  +LL   
Sbjct: 162 RKDGHVNWCPQDQTVLANEQVVQG----RCERCGADVVRRSLNQWYFRITDYAQRLLDDM 217

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +   +   P E      +++         +     + I+  D+P  +     D L
Sbjct: 218 DQLDDGRWPDEILAMQRNWI------GRSTGADVHFAIEGRDEPVTVFTTRPDTL 266



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 107/283 (37%), Gaps = 36/283 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            ++      G     D    M  ++D+      Y +        D    + W P D ++ 
Sbjct: 490 WVNVDCPSCGGPAERDTD-TMDTFVDSSWYFLRYCSPRLDTAPFDTEAVEKWGPVDHYIG 548

Query: 264 GKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           GK+    H +Y   F        ++S   P  +++ + G ++++G  +SKSLGN +D  +
Sbjct: 549 GKEHATLHLMYARFFTKVLYDMGMVSFTEPF-RRLTNQGQVINQGRAMSKSLGNGVDLGK 607

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            I+  GVDA+R  ++      +D  +    +        A    N   R +S    +   
Sbjct: 608 EIDAYGVDAVRLTMLFASPPEEDVDWADVSVVA------AQKFLNRAYRVMS----EAGA 657

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    + D  +     R + +I   ++++  + A+A+ + LVS V +  D      
Sbjct: 658 ASAPGTDPAKGDTDLRRTTHRTVDQITALVESRRFNVAIARTMELVSAVRKAID------ 711

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              + P  A   +    E +     L   F P +A + ++ L 
Sbjct: 712 ---SGPGAADPAVREAAEAVAVSLSL---FAPYVAEEGWEKLG 748


>gi|260432318|ref|ZP_05786289.1| leucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416146|gb|EEX09405.1| leucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 244

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKLSTGHNVLHPMGWDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N  + R     L +S D      T +  ++   + L+  + + G +Y
Sbjct: 90  MAIGGHPKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQALFLDMLEAGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S + ++LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVENG----RGWRSGALVERRELTQWFFKISDFAEELLEAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +    E       G
Sbjct: 206 DTLENWPAKVRLMQEXXXXXXXG 228


>gi|255725126|ref|XP_002547492.1| valyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240135383|gb|EER34937.1| valyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 1097

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 116/354 (32%), Gaps = 44/354 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E        NE     ++  + L+ ++K F          
Sbjct: 560 WCISRQLWWGHRCPVYFVDIEGEEHDRLDNEYWVSGRTEEEALAKAQKKFADKKFTLHQD 619

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +    ++T G+          F P  +   G DIL F    +   +  L+ 
Sbjct: 620 EDVLDTWFSSGLWPISTLGWPHQTK-DMELFNPMSMLETGWDILFFWVSRMILMSIKLTG 678

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
            +P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +  L   L+      ++   
Sbjct: 679 KVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIPLQGLHDKLLTGNLDPRELKK 737

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I       +
Sbjct: 738 ATEGQKISYPNGIPECGTDALRFALCAYSTGGRDINLDILRVEGYRKFCNKIYQATKFVL 797

Query: 367 SMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE 423
             +  DY         G  +  ++ IL   S   +   E ++ +    A   V +     
Sbjct: 798 GRLGNDYVPPKTSDLTGKESLVEKWILHKLSHAAKNTNEALEARNFGDATGFVYNFWYDL 857

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K      T P++  +        I     ++  F+P ++ +++  L
Sbjct: 858 CDVYIENSKSLIQDGT-PEQKKSAQDTLYTCIDGALRMIHPFMPFVSEEMWQRL 910



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G   LF  G D  G       +   
Sbjct: 178 FSIPCPPPNVTGALHIGHALTVSIQDTLIRWNRMQGKTTLFIPGFDHAGIATQSVVEKQI 237

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + D+     ++    L  SYD      T      +   
Sbjct: 238 WAKEKKTRHDYGREKFIEKVWEWKDEYHNRIKNQFKKLGASYDWTREKFTLNPDLSEAVT 297

Query: 108 ILWKKISDKGDIYK 121
             + ++ + G IY+
Sbjct: 298 EAFVRMHEDGTIYR 311


>gi|217033844|ref|ZP_03439269.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
 gi|216943742|gb|EEC23185.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
          Length = 806

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVVDGEGNPLEKHASWKFTQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDSTLEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ ++                  A     +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALN------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|284046278|ref|YP_003396618.1| isoleucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950499|gb|ADB53243.1| isoleucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 1075

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 118/396 (29%), Gaps = 24/396 (6%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T    H            K   Y       +++  +    D       DG++ N     V
Sbjct: 393 THSYPHCWRCDSKLLYYAKESWYIATRDQRHAMLRQNQRIDWRPEHVRDGRFGNWLQGNV 452

Query: 158 QW-------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            W              +  S           S  E           +          + S
Sbjct: 453 DWALSRDRYWGTPLPIWECSDPGCDARHCVGSIDELRALTGALPRDLHRPYIDEVTWACS 512

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            +     ++        +  W D+         Y           +P      G D    
Sbjct: 513 VEGCGGAMRRVR---ATIDTWYDSACMPFAQFHYPFEGVEEFRAQFPPSFICEGIDQTRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F+     + LL  ++P    V        +G K+SKS GN +DP +V+E  G DA R++
Sbjct: 570 WFYTSLAVSTLLFDDIPFQTAVCMGHVQDARGHKMSKSRGNAVDPWDVLERHGADAFRWY 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD----GMIPTPGAFT 384
            +          + K+ ++  V   L           +   ++ +D       P      
Sbjct: 630 YLAAKQPWTGYRFSKEAVEDAVKQVLMPLWQTYSFYVLYANIERFDARAAAAAPPVRKRG 689

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKP--WELKKTNP 441
           E D   +S    V+ E+RE+      H A    +  + ++ + Y    +P  W     + 
Sbjct: 690 ELDRWAISRLQGVVAEMREHNDAFDAHGATQVALQWLDDLSNWYVRLSRPRFW-----DS 744

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + A   L    E +     LL   +P  A ++++ L
Sbjct: 745 ETAGPALATLRECLLTTVKLLAPALPFAAEELYENL 780



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 27/156 (17%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTT 69
               N  P  H  H       D   R+  + G DV    G D HG  +  +  +  G  +
Sbjct: 50  PPTANGNPGSH--HVLLRSFKDFYMRYRTMCGYDVPRKAGWDCHGLPVELEVEKQLGFDS 107

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFI--------------------RTTEKRHHDTCRIL 109
           K  +++      +  +    S D +I                    RT    + ++    
Sbjct: 108 KKEIEEY--GIAEFNERCRESNDHYIGAWERLTERVGFWIDLEGAFRTGTPEYIESVWWS 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
             ++ D+G IYKG     Y  R     +  E   G 
Sbjct: 166 LHELWDRGQIYKGHKVVPYCPRCGTALSSHETAMGY 201


>gi|308185334|ref|YP_003929467.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308061254|gb|ADO03150.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 806

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 106/381 (27%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKNCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                       +     L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVINGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    + I               E+ +         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKANAINPTTSKPEFKGVGLNEAQKLARKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKTESAYSFNTLIASCMEALNALS------------------AQNNEQILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|195485094|ref|XP_002090947.1| Aats-val [Drosophila yakuba]
 gi|194177048|gb|EDW90659.1| Aats-val [Drosophila yakuba]
          Length = 1049

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 129/425 (30%), Gaps = 97/425 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 453 PICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWY-HWMDGIRDW 511

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 512 CVSRQ-LWWGHRIPAYHVSFTDPSLQAGSNDDEQYWIVARSEAEALTKAAERFGVDASKI 570

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ D     K  F+P  L   G DIL F    + +  
Sbjct: 571 VLKQDEDVLDTWFSSGIFPFSVFGWPDQTKDLKT-FYPTSLLETGHDILFFWVARMVFFG 629

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 630 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPR 689

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + +         N + N
Sbjct: 690 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVLG--YRFFCNKLWN 747

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++      + +D  +    A  + D  ILS  +  ++      ++     A +   
Sbjct: 748 ATKFALLYFTGSEKFDTELSASEAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACY 807

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D Y +  KP   +  + ++ +         +     LL  F+P +  +++  
Sbjct: 808 AFWLYDLCDVYLECLKP-IFQSGSEEQQAAARRTLYVCLDYGLRLLSPFMPFITEELYQR 866

Query: 477 LFVAD 481
           L  A+
Sbjct: 867 LPRAN 871



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 130 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 189

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    L  SYD      T + +     
Sbjct: 190 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPKLCRAV 249

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 250 TEAFVRLHEEGSIYRSSRLVNWSC 273


>gi|218883918|ref|YP_002428300.1| isoleucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765534|gb|ACL10933.1| isoleucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 1058

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 111/321 (34%), Gaps = 16/321 (4%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +   L  ++              L            +  +  + L  K    G+++   P
Sbjct: 466 WGTPLPIWECPNKHRIVIGSIRELLEYGGEMPKELHRPWIDKVVL--KCPYCGLEMHRVP 523

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++ VW+D+   +    G+  N           D  V G D     F ++     L   
Sbjct: 524 D-VIDVWLDSGVAFYAAKGHPGNLSLEDIIL---DFIVEGHDQTRGWFFSLLRAGVLGFN 579

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  KG ++ KSLGN +   E I +VG D LR +L       +D  + 
Sbjct: 580 KSPYKIVLVHGFMLDEKGREMHKSLGNYVGTDEAIAKVGRDPLRLWLASN-TIWEDARFS 638

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCSRVL 398
              L+  +  DL+      V     M L  ++    +     G     D+ ILS  + ++
Sbjct: 639 WKSLEDAL-KDLSILWNVAVFAYTYMSLDRFNPGEYSLEKVAGYLRIEDKWILSRINTLI 697

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +++ E M +  ++ A+  +           Y    +P    + N         V   V+ 
Sbjct: 698 KKVTELMDSYELYIAVRLIREFFIEDLSHWYIRLIRPRVWVEENTGDKLAAYAVLYYVLD 757

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           ++  LL  F P ++  I+  L
Sbjct: 758 RVVRLLAPFTPFISEYIYQAL 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 21/180 (11%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++        YP+   PHIG A+   + D + R+ R+ G  V    G D HG  I    +
Sbjct: 44  KRFNFIDGPPYPSGEIPHIGTAWNKTLKDAVLRYKRMKGFRVYDIPGYDCHGLPIEVKVE 103

Query: 64  NA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
                                   K     N++        L +   +D+   T   ++ 
Sbjct: 104 QKLGVSVKKEIEEKIGVERFIEECKRLALSNAKAMTKWFKELGVFMDWDNPYLTLRDKYI 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +    L KK  + G + +      +  R      + E+               V+  E E
Sbjct: 164 EAEWWLIKKAHEAGLLEEEYRVVHWCPRCSTTLAEYELEYHELEDPSIYVKFKVEGKENE 223


>gi|210135724|ref|YP_002302163.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133692|gb|ACJ08683.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 806

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E 
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLEI 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 106/381 (27%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S+     +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSNSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKNCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDVVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKNGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    + I            +  E+ +         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKANAINPTTSKPEFKEVSLNEAQKLARKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                         +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALS------------------VQNNEQILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|154687153|ref|YP_001422314.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166230608|sp|A7Z7V7|SYL_BACA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154353004|gb|ABS75083.1| LeuS [Bacillus amyloliquefaciens FZB42]
          Length = 804

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 7/209 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKQNIDNFRRQIQSLGFSYDWDREINTTDPDYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+      +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLS 208
            E         + +   I   +      +
Sbjct: 205 LEDLDWPESIKDMQRNWIGRSEGANVHFA 233



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 57/278 (20%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            K+ P D+++ G +    H +Y   +         +    P  K       +    EK+S
Sbjct: 519 DKWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P E++   G D LR + +          + + GL         +G    + R
Sbjct: 579 KSRGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---------DGARRFLDR 629

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              + +++   +  T      + E++  V    + ++ EN +    +  ++Q++  ++E 
Sbjct: 630 VWRLFIEENGEL--TGKVTEGAGETLERVYHETVMKVTENFEALRFNTGISQLMVFINEA 687

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF------ 478
            +                       +  E I     LL    P LA ++++ L       
Sbjct: 688 YK--------------------ANELPREYIEGFVKLLSPIAPHLAEELWEKLGHEGSIA 727

Query: 479 ------------VADENRCFQSLDQRLKPGFMLHKTFD 504
                       V DE      L+ ++K   M+    D
Sbjct: 728 YEAWPAYDESKLVDDEVEIVVQLNGKVKAKLMVPADAD 765


>gi|255554793|ref|XP_002518434.1| leucyl-tRNA synthetase, putative [Ricinus communis]
 gi|223542279|gb|EEF43821.1| leucyl-tRNA synthetase, putative [Ricinus communis]
          Length = 960

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 78/210 (37%), Gaps = 7/210 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D+LARF R+ G +VL   G D  G    +
Sbjct: 99  TSKPKFYVLDMFPYPSGSGLHVGHPLGYTATDILARFRRMQGYNVLHPMGWDAFGLPAEQ 158

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+   +N   FR     L  SY  D  I T E  ++   + ++ ++  +G 
Sbjct: 159 YAIETGTHPKITTLRNINRFRSQLKSLGFSYDWDREISTIEPEYYKWTQWIFLQLLKRGL 218

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  R++AY D+LL 
Sbjct: 219 AYQAEVPVNWCPALGTVLANEEVVDG----LSERGGHPVIRKPMRQWMLRITAYADRLLE 274

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +         + +   I   +    +  
Sbjct: 275 DLDDLDWPESVKDMQRNWIGRSEGAEMEFH 304



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 71/185 (38%), Gaps = 33/185 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV++P +V+ E G D+LR + +          +   G++         G+  
Sbjct: 716 HKMSKSRGNVVNPDDVVSEYGADSLRLYEMFMGPFRDSKTWSTTGIE---------GVYR 766

Query: 361 LVSRSVSMI----LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + R+  +I    L +      T     E     L    + + ++ E ++    +  ++ 
Sbjct: 767 FLGRTWRLIVGSPLSNGAFRDGTVAINEEPSFEQLRALHKCIAKVAEEIEGTRFNTGISA 826

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++  ++   ++   + P                    VI    +LL  + P +A +++  
Sbjct: 827 MMEFINAAYKW--DKLPRS------------------VIEAYVLLLSPYAPHIAEELWFR 866

Query: 477 LFVAD 481
           L  ++
Sbjct: 867 LGHSN 871


>gi|150864552|ref|XP_001383414.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
 gi|149385808|gb|ABN65385.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
          Length = 863

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 5/194 (2%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+   H+GH     I+DV+ARF RL G +V+   G D  G     AA   GV    
Sbjct: 1   MFPYPSGILHLGHTRVYTISDVIARFKRLKGYNVIHPMGWDAFGLPAENAAVERGVNPAD 60

Query: 72  FVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           + ++N    ++  D +  D  +D  + T    ++   + ++  + + G  Y+      + 
Sbjct: 61  WTERNIDKMKEQIDFMLADFDWDREVTTCSPDYYKWTQKIFLLLFENGLAYRKEAQINWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D+    +++V          A    V+    E +F  ++ Y  +L    +    +   
Sbjct: 121 PVDQTVLANEQVDSEGKSWRSGA---LVEKRNLEQWFIGITKYASELNRDLDYLKGWPQK 177

Query: 190 IERRNEVISFVKSG 203
           ++           G
Sbjct: 178 VKAMQRHWIGESHG 191



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 87/234 (37%), Gaps = 30/234 (12%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P  + +        EK+SKS  N +DP E I++ G D++R  ++ +     +  ++++ +
Sbjct: 580 PTVIATGKVPKVSYEKMSKSKYNGVDPEECIKQYGADSIRAHMLFQAPVSDELNWNEEQI 639

Query: 347 --KKRVNADLANGIGNLVSRSV----------SMILKDYDGMIPTPGAFTESDES--ILS 392
              +R        +   +SR            +  L++++           S     +LS
Sbjct: 640 QGVQRWLRK-VISLEETISRLALERKTYSGVDTFKLENFELCGVHHDVLEVSQNEFNLLS 698

Query: 393 VCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-V 450
              R +Q I  +++     +  ++ ++ L    +    A KP             V Y +
Sbjct: 699 DVQRYIQRIANSIEVELSFNTVISDLMKL---TNAIIAASKP----------GEDVNYEI 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
            ++  R+L I+L    P  A + ++ L    E  C     +R      +   F 
Sbjct: 746 LLDSYRKLLIILSPITPCTAEECWERLNSNLELECKSIFHERYPTHQKIESPFT 799


>gi|108563921|ref|YP_628237.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373647|sp|Q1CR59|SYL_HELPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|107837694|gb|ABF85563.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 806

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LEDHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 105/381 (27%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    + I               E+ +         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKANAITPTTSKPEFKGVILNEAQKLARKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKTESTYAFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|310792363|gb|EFQ27890.1| leucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 961

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +   Y+     YP+   H+GH     IADVLAR+H + G  V+   G D  G     A
Sbjct: 83  SSKPNKYVLPMFPYPSGTLHLGHLRVYTIADVLARYHTMQGSRVMLPMGWDAFGLPAENA 142

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + GV    +   N    ++  +V+  + ++D  + T +   +   + L+  + ++G  
Sbjct: 143 AIDRGVAPAAWTKSNIVKMKEQLEVMNGNWNWDRELTTCDPDFYKHTQKLFLMMLERGLA 202

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D     +++V          A+   V+  + + +FFR+S +++ LL  
Sbjct: 203 YQAEAEVNYDPVDMTVLANEQVDANGCSWRSGAK---VEKRQLKQWFFRISEFREALLKD 259

Query: 180 YESHPEFILPIERRNEVISFV 200
            ++  +     ER   +    
Sbjct: 260 LDTLAKDESWPERVLAMQKNW 280



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 113/401 (28%), Gaps = 93/401 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK--------D 206
            PV+      +      Y    +          +P+      ++    G           
Sbjct: 478 KPVEKWRLRDWLISRQRYWGTPIPIVHCGSCGPVPVPDDQLPVTLPDVGDHWTNGQAGNP 537

Query: 207 LSLSRKTFDWGIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFWPAD 259
           L  + +  +                M  ++D+   Y       +  +      AK  P D
Sbjct: 538 LERAEQWVNTSCPKCGGHAKRDTDTMDTFVDSSWYYARFVDPHNASEPLSAEAAKALPVD 597

Query: 260 LHVIGKDILRFHAIYWPAFLLSA---------------NLPL------------------ 286
           L++ G +    H +Y                       + P                   
Sbjct: 598 LYIGGIEHAILHLLYARFIYKFLATTPLFPSSGEADTVHEPFKRLITQGMVHGKTYTDPK 657

Query: 287 -----------------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                            PK V +        EK+SKS  N +DP E I + G DA R  +
Sbjct: 658 SGKFLKPDEVDLKDPSNPKVVATGATANVSFEKMSKSKYNGVDPTEFISKYGADATRAHI 717

Query: 330 VREIACGKDGFYDKDGL--KKRVNADLANGIGNL---------VSRSVSMILKDYDGMIP 378
           + +        +D+  +    R    L +   +L         V+  +     +   M  
Sbjct: 718 LFQAPVSDILNWDESKIAGVTRWLQRLCDHAASLQKTPTEEKSVATYLEERSGNLSSMNE 777

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELK 437
              A  ++D +I       +  I ++ +    ++  ++ ++SL    +   D  K   L 
Sbjct: 778 DELAAWDADAAIWRAVQNTINSITQSYETVYSMNTIISDLMSL---TNTLLDNTKASALI 834

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +              E +  L  ++    P ++ + + IL+
Sbjct: 835 Q-------------REAMSVLLRMMAPVAPAVSEECWSILY 862


>gi|325971142|ref|YP_004247333.1| isoleucyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026380|gb|ADY13139.1| Isoleucyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 1042

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 65/461 (14%), Positives = 129/461 (27%), Gaps = 29/461 (6%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    G  E   ++ K +    V       + +    D         D  I    K H+ 
Sbjct: 323 VHTAPGFGEDDYQVLKGSGIPVVCPVDLECRFTSEVPDFEGRFVKDTDKDIIAYLKEHNL 382

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                   +      Y+      Y      + + +++ +            P    E   
Sbjct: 383 LV-KRENYLHSYPFCYRTKKPLIYRAMSCWFVDINKIKEYMLSSNDQITWMP----EHLK 437

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSL 209
           Y       +         +  +  PI                         K        
Sbjct: 438 YGRFGKWLEGARDWAISRNRFWGNPIPVWKCDGSDYIEVIGSRAELEAKCGKQVDDLHKH 497

Query: 210 SRKTFDW----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                 W    G         ++  W ++ +       Y         + +PAD    G 
Sbjct: 498 FVDDLTWPSPDGKGTMRRIGDVLDCWFESGSMPYAQQHYPFENKEYFEQHFPADFICEGL 557

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F+ +   A  L         + +   +  +G+K+SKS  N  DP+E+++  G D
Sbjct: 558 DQTRGWFYTLTVIAAGLWEKPAFTHCITNGIVLTAEGKKMSKSERNYTDPMEIVKLYGAD 617

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           +LR+ L+       +D  + ++ +K+ +   +               +  Y+        
Sbjct: 618 SLRFALMNSAVVRAEDLKFSEESVKEVLKTLIIPLWNAYSFFVTYANIDGYEASETAFDD 677

Query: 383 FT-ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTN 440
            T   D  I S   R +QE+        I +A +  +  + E+ + Y    +    +  N
Sbjct: 678 LTNPMDRWITSALQRFVQEVTAAFDAYDIQKACSLFVPFIDELNNWYIRRSRRRFWRGEN 737

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                       +V+      +   +P    +IF  L   D
Sbjct: 738 DTDKKQAYDTLYKVLMTFIKTVAPIIPFTTEEIFQNLRTDD 778



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D + R+H + G  V    G D HG  +    + +       
Sbjct: 47  PPFATGLPHFGHLVPGTIKDAIPRYHTMKGQRVRRGFGWDCHGLPVEYEMEKSLGISGHS 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + ++ +++  + +   + +D   RT +  + ++   ++K +
Sbjct: 107 AIVKYGVAKFNEQCRSIVLRYTKEWQNTINRMGRWVDWDHGYRTMDTNYMESIWWVFKTL 166

Query: 114 SDKGDIYK 121
            DKG IY+
Sbjct: 167 FDKGYIYE 174


>gi|320592093|gb|EFX04532.1| leucyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 1005

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y+     YP+   H+GH     IAD +ARFHRL G DVL   G D  G     AA  
Sbjct: 92  PSKYVLPMFPYPSGNLHLGHLRVYTIADAIARFHRLQGCDVLLPMGFDSFGLPAENAALQ 151

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +   N  N +    V++ S+D    + T E   +   + ++  +  +G  Y+ 
Sbjct: 152 RGIQPAAWTRANIANMKAQLGVMNGSFDWSRELSTCEPEFYKHTQHIFLMLHQQGLAYQA 211

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y   D+    +++V               V+  +   +F R SA++D LL   + 
Sbjct: 212 EAEVNYDPVDQTVLANEQVDAH---GRSWRSGALVEKRQLRQWFLRTSAFRDALLDDLDV 268

Query: 183 HPEFILPIERRNEVISFV 200
                   ER   +    
Sbjct: 269 LARDGAWPERVLTMQRNW 286



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 81/243 (33%), Gaps = 57/243 (23%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
           EK+SKS  N IDP + I   G DA R  ++ +        +D D +    R  A L + +
Sbjct: 704 EKMSKSKHNGIDPTDFIRTHGADATRAHVLFQAPVADVLSWDDDKVTGITRWLARLYDVV 763

Query: 359 GN-------------------LVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVL 398
                                L+ RS ++          P   A  ++D ++       +
Sbjct: 764 IKARRAAADSAPVTCEHVTKDLLRRSDALATTTTTTTQNPDALARWDADSAVWRDLQATI 823

Query: 399 QEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             +  + +    ++  ++ ++ L + +  + D   P                V    +  
Sbjct: 824 SSVTASYERVYSLNTVVSDLMRLTNSLAAHEDVASP---------------SVLHHALSG 868

Query: 458 LAILLQAFVPKLANKIFDILFVAD---------ENRCFQSLDQRLKPGFMLHKTFDPIFP 508
           L  +L    P  A + + +L  A+         E+  F +LD  L            + P
Sbjct: 869 LVRMLAPVAPAFAEECWSVLEPAESSLFGRPAAESSIFPTLDGSLAW----------LQP 918

Query: 509 RFL 511
           R L
Sbjct: 919 RLL 921


>gi|114326669|ref|YP_743826.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122328346|sp|Q0BW99|SYL_GRABC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114314843|gb|ABI60903.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 875

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G D  G     AA+ 
Sbjct: 48  RTYYVLEMFPYPSGQIHMGHVRNYTLGDVVARYKRAQGYQVLHPMGWDAFGLPAENAARE 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    +   N    R     + +S  ++    T +  ++   + L+     K  + + 
Sbjct: 108 RGVHPGQWTWNNIAAMRGELQRMGLSITWEREFATCDPSYYGHQQALFLDFLKKNLVERR 167

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   DE    +++V  G           PV+  +   +F R++ Y ++LL+  + 
Sbjct: 168 ESWVNWDPVDETVLANEQVIDGKG----WRSGAPVERKKLSQWFLRITDYAEELLAGLDQ 223

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +            G
Sbjct: 224 LDRWPERVRVMQSRWIGRSEG 244



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/405 (12%), Positives = 118/405 (29%), Gaps = 78/405 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V       +      Y    +          +P+      ++  +    D   +      
Sbjct: 432 VTNWRLRDWGVSRQRYWGCPIPIIHCDQCGPVPVPADQLPVTLPEDVTFDRPGNPLDHHP 491

Query: 217 GIKIPDDPQ---------YIMYVWIDALTNYLTTTGYLDNPDGSKA---KFWPADLHVIG 264
             K    P               ++D+   +        +    K     + P D ++ G
Sbjct: 492 SWKHVTCPSCGAAAVRETDTFDTFVDSSWYFARFASPHAHVPVLKEAAQNWLPVDQYIGG 551

Query: 265 KDILRFHAIY----WPAFLLSANLP--------LPKKVFSHGFILH-------------- 298
            +    H +Y      A   + ++P          + + +H                   
Sbjct: 552 IEHAILHLLYARFFTRAMADTGHVPVREPFAGLFTQGMVTHESYRAADGRWLSPVEVTRH 611

Query: 299 ----------------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                           +GEK+SKS  N + P E+    G DA R+F++ +    +D  + 
Sbjct: 612 GETVVETATGEPVQVGRGEKMSKSKRNTVAPGEIFNRYGADAARWFILSDNPPERDMEWT 671

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G         A      + R    + +          A +++  ++  +  R +  + 
Sbjct: 672 DAGAVG------AYRFVQRLYRLAEAVARIAKEETNRDDASSDAAMTLRRMTHRTVAAVT 725

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV---EVIRQLA 459
           E ++    + A+A+V    + +              T  ++ +    +T    E I  L+
Sbjct: 726 EALEGFNFNVAVARVYEFANAL--------------TEAEKKAAEPGMTAARVEAITLLS 771

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
            ++   +P LA ++   L         + +     P  ++ ++  
Sbjct: 772 RIIAPMMPHLAEEM-ATLIEQGPKLVAEQVWPSADPALLVVQSVT 815


>gi|218187412|gb|EEC69839.1| hypothetical protein OsI_00164 [Oryza sativa Indica Group]
          Length = 946

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K YI     YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 95  TSKPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMQGFNVLHPMGWDAFGLPAEQ 154

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+  ++N   FR     L  SY  D  I TTE  ++   + ++ ++  +G 
Sbjct: 155 YAIETGTHPKITTERNINRFRSQLKSLGFSYDWDREISTTEPTYYKWTQWIFLQLLKRGL 214

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  R+++Y D+LL 
Sbjct: 215 AYQAEVPVNWCPALGTVLANEEVIDG----VSERGGHPVIRKPMRQWMLRITSYADRLLE 270

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 271 DLDELDWPESIKEMQRNWIGRSE 293



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 33/181 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 712 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 762

Query: 362 VSRSVSMILKDY--DGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
           + R+  +++     DG        T+ + ++  L V  + +  + E +Q    + A++ +
Sbjct: 763 LGRTWRLVVGTPLPDGSYGVGTTVTDEEPTLDQLRVLHKCIARVTEEIQETRFNTAISAM 822

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+   ++    +P    K+              VI    +LL  F P +A +++  L
Sbjct: 823 MEFVNAAYKW--DTQP----KS--------------VIESFILLLSPFAPHMAEELWFRL 862

Query: 478 F 478
            
Sbjct: 863 G 863


>gi|327404343|ref|YP_004345181.1| valyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319851|gb|AEA44343.1| valyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 876

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 77/409 (18%), Positives = 142/409 (34%), Gaps = 62/409 (15%)

Query: 141 VYKGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           V    +   Y+ + N V +      +F  +       L    +      P + +N     
Sbjct: 334 VEDHINKIGYSERTNCVIEPRLSLQWFVSMKELAQPALENVMNGNISFHPDKFKNT-YRH 392

Query: 200 VKSGLKDLSLSRKTFDWGIKIP-------------------------------------- 221
               +KD  +SR+   WG +IP                                      
Sbjct: 393 WMENVKDWCISRQ-LWWGHRIPAFFYGNGPEDFVVARTMEEAIELAKAKSGNNALSAADL 451

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAF 278
              + ++  W  +    ++    L  P   + K++ P +  V   +I+ F    +    +
Sbjct: 452 KQDEDVLDTWFSSWLWPISVFNGLTRPGNEEIKYYYPTNDLVTAPEIMFFWVARMIIAGY 511

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP     ++       G K+SKSLGN  DPIE+IE+ G D +R  ++     G D
Sbjct: 512 EYMGELPFKNVYYTGIVRDKLGRKMSKSLGNSPDPIELIEKYGADGVRLGMLLSSPAGND 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D    ++  N        N +  +  ++       I  P A  ++ E   +  ++ L
Sbjct: 572 LPFDSSQCEQGRN------FTNKIWNAARLVKGWEVKPIEQPKASIKAIEWFSARFNQEL 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + I E M    I  AL  +  LV +     Y +  KP   +  +       L  T+    
Sbjct: 626 ENINELMNKFKISEALMAIYKLVWDDFCAWYLEMIKPGYEQPID----QATLDQTIVFFE 681

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           +L  L+Q F P +A +++ +L    E          +   + + + FDP
Sbjct: 682 KLLCLVQPFTPFVAEELWHLLRERQEGEDI------IIAKWPIVEAFDP 724



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE   +           H+GH     I DVL R  R++G +  +  GTD          
Sbjct: 32  DREPFTVVIPPPNVTGVLHMGHMLNNTIQDVLVRKARMEGKNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                                    + ++           L  S D      T +  + D
Sbjct: 92  VQKLREEGIKKSDLSRDEFLNHAFAWKEKYGGVILQQLKKLGASCDWERTAFTMDPEYSD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  +  KG IY+G     +        +D+EV  
Sbjct: 152 SVVNIFIDLFQKGKIYRGVRMINWDPEASTALSDEEVIH 190


>gi|320100559|ref|YP_004176151.1| Isoleucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752911|gb|ADV64669.1| Isoleucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 1062

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 103/273 (37%), Gaps = 14/273 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G+++   P  +  VW+D+   +    G+ D            D  V G D     F
Sbjct: 514 CPHCGLEMRRVPD-VADVWLDSGVAFYAAKGHPDELSPEDVIL---DFIVEGHDQTRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            ++     L     P    +     +  KG ++ KSLGN +   E I  VG D LR +L+
Sbjct: 570 FSLLRAGVLGFNRSPYRTVLVHGFMLDEKGREMHKSLGNYVGTDEAISRVGRDPLRLWLL 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTES 386
                 +D  +    L++ V  DL+      V     M L  YD    T     G     
Sbjct: 630 -GNTTWEDARFSWKSLEEAV-RDLSVLWSIAVFAYTYMRLDKYDPAGHTIRDVSGHLRVE 687

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D+ ILS  + +++++ E M++  ++ A+  +           Y    +P    + N    
Sbjct: 688 DKWILSRVNTLIKQVSELMESYQVYEAVRLLREFFVEDLSHWYIRLIRPRVWVEENTGDK 747

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                V   VI ++A L+  F P +A  ++  L
Sbjct: 748 LAAYTVLYYVIDRVARLIAPFTPFIAEYMYQAL 780



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 21/141 (14%)

Query: 13  IAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------ 65
             YP+   PHIG A+   + D + R+ R+ G  V    G D HG  I    +        
Sbjct: 54  PPYPSGDIPHIGTAWNKALKDAVLRYKRMKGYRVYDRPGYDCHGLPIEVKVEQKLGVSVK 113

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWK 111
                           +     N+         L +   +D+   T    + +    L K
Sbjct: 114 KEIEERIGVERFIEECRRLALTNANAITRWFKELGVFMDWDNPYLTLRDEYIEAEWWLIK 173

Query: 112 KISDKGDIYKGCYSGWYSLRD 132
           K  + G + +      +  R 
Sbjct: 174 KAHEAGLLEEEYRVVHWCPRC 194


>gi|227536068|ref|ZP_03966117.1| isoleucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243965|gb|EEI93980.1| isoleucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 1151

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 104/288 (36%), Gaps = 16/288 (5%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTG---------YLDNPDGSKAKFWPADLHVIGKDI 267
           G K+  +P  ++ VW D+        G                     +PAD    G D 
Sbjct: 606 GQKLFREPD-LIDVWFDSGAMPYAQWGLDHDKLARGEEYPFKEGFESAFPADFIAEGVDQ 664

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F  ++  + +L  ++     V +   +   G K+SK LGN +DP   I+    DA 
Sbjct: 665 TRGWFFTLHAISTMLRKSVAFRNVVSNGLVLDKNGNKMSKRLGNGVDPFATIDHYSADAT 724

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT- 384
           R++++   A   +  ++ +GL +                ++   +  +    P       
Sbjct: 725 RWYMISNAAPWDNLKFNTEGLDEVRRKFFGTLYNTYAFFALYANIDKFAYAEPDIAIENR 784

Query: 385 -ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
            E D  I+S+ + + +E+ E + +    +A   + + V E   + Y    +    K    
Sbjct: 785 PEIDRWIISLLNSLTKEVDEYLADYEPTKAARAIQNFVDEHLSNWYVRLCRRRFWKGEYS 844

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +   +        +  +A L+    P  ++++F  L    +    +S+
Sbjct: 845 EDKISAYQTLYTCLNTIAKLMSPISPFFSDRLFLDLNEVTKKETVESV 892



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 19/143 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N  P I HA    I D+  R+  L G  V    G D HG  I  A + 
Sbjct: 52  KPYTFYEGPPSANGMPGIHHAMARSIKDIFCRYKTLKGYQVKRKGGWDTHGLPIELAVEK 111

Query: 65  AGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TTEKRHHDT 105
               TK  + +       N+   +++    D+  D  I+            T E  + +T
Sbjct: 112 TLGITKEDIGKKISVEEYNAACRKEVMKYTDVWNDLTIKMGYWVDLENPYITYENEYIET 171

Query: 106 CRILWKKISDKGDIYKGCYSGWY 128
              L K++  KG +YKG     Y
Sbjct: 172 LWYLLKELYKKGLLYKGYTIQPY 194


>gi|33862987|ref|NP_894547.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|48428527|sp|Q7TV01|SYL_PROMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634904|emb|CAE20890.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 878

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +++ Y  +   YP+ + H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 44  TNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    + DQN    R   D L   I +D    T  + ++   + L+ ++   G  
Sbjct: 104 AIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAGGLA 163

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+  + + +F R++ Y D L+  
Sbjct: 164 YQKEATVNWDPVDKTVLANEQVDGE---GRSWRSGALVEQRQLKQWFLRITDYADALIDD 220

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 221 LDELTGWPERVRTMQANWIGRSHG 244



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 26/212 (12%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        + 
Sbjct: 628 FEKMSKSKYNGVDPAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLI 685

Query: 360 NLVSRSVSMILKDYDGMIP------TPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHR 412
            L+           +  I            +E + ++     + ++ I E++  +  ++ 
Sbjct: 686 RLIDSFAWPKTDGENASISSANLIIDSADLSEEEINMRRATHKAIEAITEDLSGDIQLNT 745

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+++++ L + +    D  +                 V  E +  L  L+  F P LA +
Sbjct: 746 AISELMKLSNSLSGKLDKVR---------------NEVAAEALSVLVRLMAPFAPHLAEE 790

Query: 473 IFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
            +  L +       Q     + P  ++ +T +
Sbjct: 791 FW--LKLHGHGSIHQQSWPVIDPSALVLETIE 820


>gi|296331993|ref|ZP_06874457.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675613|ref|YP_003867285.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150764|gb|EFG91649.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413857|gb|ADM38976.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 804

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 7/219 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQSLGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E         + +   I   +      ++      + +
Sbjct: 205 LEELDWPESIKDMQRNWIGRSEGAHVHFAVDGHAESFTV 243



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 42/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+            K + W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRYIDPRNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   + ++D   +         + E++  V 
Sbjct: 609 LDASIAWSESGL---------DGARRFLDRVWRLFVEDSGEL--NGKIVEGAGETLERVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + ++ ++ +    +  ++Q++  ++E  +                       +  E 
Sbjct: 658 HETVMKVTDHYEGLRFNTGISQLMVFINEAYK--------------------ATELPKEY 697

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     LL    P LA ++++ L 
Sbjct: 698 MEGFVKLLSPVAPHLAEELWEKLG 721


>gi|157803821|ref|YP_001492370.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166231639|sp|A8EZ02|SYL_RICCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157785084|gb|ABV73585.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 834

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 82/203 (40%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K Y+   + YP+ + H+GH     I DV+ARF  + G +VL   G D  G     AA
Sbjct: 25  NKPKYYVLEMLPYPSGKIHVGHVRNYSIGDVIARFMNMQGFNVLHPMGWDAFGLPAENAA 84

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  K +   N  N +     +  +YD    I + + +++   +  + ++ ++   Y
Sbjct: 85  IKNNVHPKEWTYSNVDNMQQQLKSMGFAYDWSRVINSCDPQYYKYEQKFFLELYERNLAY 144

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            ++    + +F +++ Y ++LL+  
Sbjct: 145 QKEALVNWDPVDNTVLANEQVVDG----RGWRSGAIIEKRYLKQWFLKITDYAEELLNEI 200

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++  E+   +    E       G
Sbjct: 201 KNLKEWPEAVRSMQEKWIGKSIG 223



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 122/389 (31%), Gaps = 36/389 (9%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          K C       +D      D V     G   +       W     
Sbjct: 413 ISRQRFWGCPIPMIYCKVCDIVPVPYKDLPVTLPDNVKFNGHGNPLDHHPT---WKHVNC 469

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       +           D  L    +  GI+     
Sbjct: 470 PKCDKPAIRETDTFDTFFESSWYFTRYCNSHATDMTDKKACDYWLPVDKYIGGIEHA--- 526

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        +       +        +   + +        +   +P  ++  + 
Sbjct: 527 --VMHLLYARFFTKVMNEQNYVSVREPFKGLFTQGMVLHATYKDEHNNWLYPDEVVKKDN 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K   +  +  + EK+SKS  N+ID   + ++ G DA+R F++ +    KD  +   
Sbjct: 585 KFFHKKSGNLVVQGRIEKMSKSKKNLIDLETMQKQYGADAIRLFVLSDSPPEKDLEWSVS 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           GL+               SR ++ +   +  +       T  ++ +  +    ++ + E+
Sbjct: 645 GLEG-------------CSRFINKLEHMFKVIASLKDDVTGINKELNRLVHLTIKYVAED 691

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++  ++RA+A++  L + +          E  K   D   TV Y        L  LL  
Sbjct: 692 IKHFALNRAIARMRELSNAISS--------EFSKEVMD-VKTVKY----GFNVLVQLLNP 738

Query: 465 FVPKLANKIFDILFVADE--NRCFQSLDQ 491
           F+P +  +I+  L   +      F + D+
Sbjct: 739 FIPHITEEIWQKLGNKERLYKTAFPAFDE 767


>gi|148555761|ref|YP_001263343.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|189083151|sp|A5VA89|SYL_SPHWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148500951|gb|ABQ69205.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 835

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y+     YP+ + H+GH     + DVLAR+ R+ G +VL   G D  G     AA 
Sbjct: 32  KPKSYVLEMFPYPSGRIHMGHVRNYTMGDVLARYRRMKGFEVLHPMGWDAFGMPAENAAM 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V    +   N    RD    +  + D    + T E  ++   + L+  +   G +Y+
Sbjct: 92  EKKVHPGDWTRANIAAMRDQLKRIGFALDWSRELATCEPDYYGQEQALFLDLYAAGLVYR 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D     +++V  G            V+  +   +F +++ + D LL   +
Sbjct: 152 KESAVNWDPVDMTVLANEQVIDG----RGWRSGALVERRKLNQWFLKITDFADDLLDGLD 207

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
           +  ++   +    E       G+
Sbjct: 208 TLDQWPEKVRTMQENWIGKSQGM 230



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 112/382 (29%), Gaps = 60/382 (15%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY---YNAQHNPVQWMEEEGYFFRLSAY 172
            G          + +  + Y+         +G           PV   E+  +    +  
Sbjct: 413 WGQGTTVWRLRDWGVSRQRYWGTPIPIIHCEGCGAVPVPHDQLPVVLPEDVAFDIPGNPL 472

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                  +   P    P  R  + +         +  S     +  +  D P        
Sbjct: 473 DRHPTWKHVDCPSCGKPARRETDTLDTF------VDSSWYFIRFASQPSDKPFDRAVAES 526

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKV 290
                               A+FW   L  IG+  +   F  ++    +       P   
Sbjct: 527 WMPVGQYIGGVEHAILHLLYARFWTRALERIGRIGVKEPFTGLFTQGMVTHETYKDPAGQ 586

Query: 291 FSHGFILHKG--------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +     +  G              EK+SKS  NV+DP  ++E+ G DA+R+F++ +    
Sbjct: 587 WLSPEEVSDGIVVATGAPATVGRIEKMSKSKKNVVDPAPIVEQYGADAVRWFMLSDSPPE 646

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  + + G++         G    V+R           +     A    D  +     +
Sbjct: 647 RDLEWTESGIE---------GCWRFVNRLWR--------ITDVSEAGDGEDRELDRKLHK 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            +  I  +++    +RA+A++  L +             ++K  P  +       +  + 
Sbjct: 690 AIAGIAADIEALGFNRAVAKIHELSNA------------IEKAAPSASRAAAARALVRLV 737

Query: 457 QLAILLQAFVPKLANKIFDILF 478
                    VP LA + +  L 
Sbjct: 738 A------PMVPHLAEEAWARLG 753


>gi|169860707|ref|XP_001836988.1| valine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116501710|gb|EAU84605.1| valine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 1078

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 79/538 (14%), Positives = 164/538 (30%), Gaps = 115/538 (21%)

Query: 36  RFHRLDGLDVLFT-------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  L G  V+           TD     +        +T     +      R   + ++
Sbjct: 371 RYKHLHGKYVVHPFVNRRIPIITDSIVVDMEFGTGAVKITPAHDPNDYEAGQRHNLEFIN 430

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           I  D      +   +D    L+K +       K        L  E     +         
Sbjct: 431 ILND------DGTLNDNAGELFKGMKRFHARNKVV-----ELLKERGLYVETKDNPMQIP 479

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +   + ++ + +  ++       ++ +    +    I P    NE   +++  ++D  
Sbjct: 480 ICSKSGDVIEPILKPQWWVNCKPLAEEAIKRTRAGELVIQPKTSENEWYRWLE-NIQDWC 538

Query: 209 LSRKTFDWGIKIP-------------------------------------------DDPQ 225
           +SR+   WG + P                                           +  +
Sbjct: 539 ISRQ-LWWGHRCPAYFVNVEGEEQDRNADKNWVVGRTKDEALERAKVIANGKPFTLEQDE 597

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSAN 283
            ++  W  +     +  G+ +     +  F+P+ +   G DIL F           L+  
Sbjct: 598 DVLDTWFSSGLWPFSIMGWPEKTSDLRD-FYPSSILETGWDILFFWVARMVLLGIHLTGQ 656

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG--- 339
           +P  K+V+ H  I    G K+SKSLGNVIDP +VI  + ++ L   L       K+    
Sbjct: 657 MPF-KEVYCHAMIRDAHGRKMSKSLGNVIDPTDVITGLPLEELHKKLHEGNLDEKEIVKA 715

Query: 340 --------------------------------FYDKDGLKKRVNADLANGIGNLVSRSVS 367
                                             + + L+        N + N    ++ 
Sbjct: 716 KAGQKKDFPKGIPQCGTDALRFALCAYSGGGRDINLEILRVEGYRKFCNKVFNATKFAML 775

Query: 368 MILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
            + + +  + +    G  +  ++ IL   +    E+ + +  +    A     +      
Sbjct: 776 KLDESFVPEPLAKPTGNESLVEKWILHKLNVAATELNKALAERNFMNATNVAYNFWLYEL 835

Query: 424 VDRYFDAQKPWELKKTNPDRASTVL----YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +A KP     T+P   ++V           +     LL  F+P +  +++  L
Sbjct: 836 CDVYIEAMKP----MTDPSAPASVQKSAQQTLYTCLDYGLRLLHPFMPFVTEELWQRL 889



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 22/151 (14%)

Query: 3   EREK---LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
            + K     I           HIGHA  + I D L R++R+ G   LF  G D  G    
Sbjct: 146 GKPKGDVFVIPAPPPNVTGSLHIGHALTVAIQDTLVRWNRMLGKSTLFVPGFDHAGISTQ 205

Query: 60  KAAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEK 100
              +                     T   + ++           L  SY  D    T ++
Sbjct: 206 SVVEKRLYKTTGKTRHDLGREKFLETVMDWKNEYQDRITKQLHRLGGSYDWDRAAFTMDE 265

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
           +        + K+ + G +Y+      + ++
Sbjct: 266 KLSKAVIETFCKLHEDGILYRANRLVNWCVK 296


>gi|225012387|ref|ZP_03702823.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003364|gb|EEG41338.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 1127

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 100/268 (37%), Gaps = 13/268 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                 ++ VW D+         Y             +PAD    G D     F+ ++  
Sbjct: 593 MQRESDLIDVWFDSGAMPYAQWHYPFENKEKIDAGDRFPADYIAEGVDQTRGWFYTLHAI 652

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             L+         V +   +   G+K+SK LGN +DP + +++ G DA R++++      
Sbjct: 653 GTLVFGKKAYKNVVSNGLVLDKSGQKMSKRLGNAVDPFKTLDQYGADATRWYMISNANPW 712

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSV 393
            +  +D +G+ +                S+   +  +D    TP  F   TE D  ILS 
Sbjct: 713 DNLKFDAEGIAEVQRKFFGTLYNTYSFFSLYANIDAFDPKKETPIPFENRTELDRWILSE 772

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLY 449
              ++Q +    ++    +A   +   V E   + Y     ++ W+  +  PD+ +    
Sbjct: 773 LHSLIQLVDAAYEDYEPTKASRAISDFVQEKLSNWYVRLCRRRFWK-GEYGPDKIAA-YQ 830

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
              + +  ++ L     P   ++IF  L
Sbjct: 831 TLYDCLLTVSKLAAPIAPFYMDRIFQDL 858



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P I H     I D+  R+    G  V    G D HG  +   
Sbjct: 36  EGKPSFVFYEGPPSANGMPGIHHVMARAIKDIFCRYKTQKGFQVHRKAGWDTHGLPVELG 95

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + ++   +   +  +D   T   ++
Sbjct: 96  VEKELGITKDAIGKTISVEAYNEACKKAVMRYTDVWNELTQRIGYWVDMEDPYVTYTSKY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            ++   L K+I DKG +YKG     YS  
Sbjct: 156 MESVWWLLKQIHDKGLLYKGYTIQPYSPM 184


>gi|328782776|ref|XP_624911.2| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           isoform 2 [Apis mellifera]
          Length = 866

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 5/202 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++K YI +   Y +   H+GH     I+D +ARF+R+ G +VL   G D  G     AA
Sbjct: 63  EKKKFYILSMFPYSSGMLHMGHVRVYTISDTIARFYRMKGYNVLHPIGWDAFGLPAENAA 122

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    +   N +N R+   +L+ S+  D  I T +  ++   + L+ K+ +K  +Y
Sbjct: 123 IEKQINPIEWTYDNIKNMRNQLKLLNYSFDWDREITTCDPEYYKFTQELFLKLFEKDLVY 182

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   DE    +++V          A+   ++      +F R +++   L    
Sbjct: 183 RKESFVNWDPIDETVLAEEQVDANNCSWRSGAK---IEKRLLNQWFIRTTSFAKSLFEGL 239

Query: 181 ESHPEFILPIERRNEVISFVKS 202
                      +  +     K 
Sbjct: 240 SDPKLIDWRDIKTIQENWIGKC 261



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 116/354 (32%), Gaps = 71/354 (20%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDL--SLSRKTFDWGIKIPDDPQYIMYVW 231
                  +  P   LP+   +   S  K  L +    L+      GI+   +    M  +
Sbjct: 421 HCSNCGIQPVPYNELPVLLPSITFSNKKIILHEAKDWLNTSCPKCGIQAIRESD-TMDTF 479

Query: 232 IDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFLL------- 280
           +D+   YL      +  +        + +P +L+V GK+    H  Y             
Sbjct: 480 VDSSWYYLRYIDSKNMKEMFAVDKVREIFPVNLYVGGKEHAVLHLYYARFISHFLHSEGL 539

Query: 281 -SANLPLPKKVFSHG----------------------------------FILHKGEKISK 305
             +  P  + +                                       +    EK+SK
Sbjct: 540 LPSQEPFQRLLVQGMVLGKTYQVKNTEKYLKADEVEENKGEYVEKNTKEQVTVSWEKMSK 599

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA--DLANGIGNLVS 363
           S  N IDPI+ I++ G+D  R F++ + A   D + + + +   +N    L   +    +
Sbjct: 600 SKHNGIDPIKFIDKYGIDTTRLFILADQAPISDKYCNDNTMPGILNWQNRLWKVVKTFTN 659

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN-MQNQLIHRALAQVISLVS 422
               + L ++      P    + D  +    +  L+ +  N ++ Q +  A++++  L +
Sbjct: 660 YRNGVSLNNFKVKPTDPKFIND-DAYMFDSRNYFLKIVTFNIIKTQQLSIAISRMQGLTN 718

Query: 423 EVD-RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V        +         +RA  V            I+L  F P  A++++ 
Sbjct: 719 RVSMECIQKSR-------EFERALAVQ----------IIMLAPFAPHFASELWS 755


>gi|313204144|ref|YP_004042801.1| isoleucyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443460|gb|ADQ79816.1| Isoleucyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 1119

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 99/274 (36%), Gaps = 14/274 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           ++ VW D+         Y             +PAD    G D     F  ++  + ++  
Sbjct: 586 LIDVWFDSGAMPYAQLHYPFENKELIDNHTNFPADFISEGVDQTRGWFFTLHAISTMVKG 645

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   +  +D
Sbjct: 646 SVAFKSVISNGLVLDKNGNKMSKRLGNGVDPFSTIEKYGSDPLRWYMMTNASPWDNLKFD 705

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRV 397
            +G+ + V       + N  S     +  + D               E D  I+S+ + +
Sbjct: 706 SEGIDE-VRRKFFGTLYNTYSFFS--LYANVDKFTYAEAEVPMDNRPEIDRWIISLLNTL 762

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++++ E  +     RA   +   V E   + Y    +         +   +        +
Sbjct: 763 VKDVTEYYETYEPTRAGRAISDFVGENLSNWYVRLNRKRYWGGEYDEDKISAYQTLYTCL 822

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  L+    P  A+++F  L         +S+
Sbjct: 823 ETVTRLMAPIAPFFADQLFLDLNAVTGKDSNESV 856



 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 22/207 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P I H     I DV  R+  + G  V    G D HG  +   
Sbjct: 37  EGKPSFVFYEGPPSANGLPGIHHVMGRTIKDVFCRYKTMQGFQVKRKAGWDTHGLPVELG 96

Query: 62  AQNAGVTTKVFVD-----------------QNSRNFRDMADVLDI---SYDDFIRTTEKR 101
            + A   TK  +                  + ++ + D+   +       D +I T + R
Sbjct: 97  VEKALGITKEDIGSKISVDDYNAACRKDVLKYTKEWEDLTTKMGYWVDMNDPYI-TYDNR 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + +T   L K++ +K  +YKG     YS       +  E+ +             V   +
Sbjct: 156 YIETLWWLLKQLYNKNLLYKGYTIQPYSPAAGTGLSTHELNQ-PGCYRDVKDTTCVAQFK 214

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFIL 188
            +                  S+    +
Sbjct: 215 LKNEENTYFLAWTTTPWTLPSNTALCV 241


>gi|304392702|ref|ZP_07374642.1| leucyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295332|gb|EFL89692.1| leucyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 887

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA
Sbjct: 34  DAQTYYVLEMFPYPSGRIHMGHVRNYAMGDVIARYKRAKGFEVLHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                  K +   N  + R     L +S D      T +  ++   + L+    D   + 
Sbjct: 94  MQNKTHPKGWTYDNIASMRSQLKSLGLSLDWSREFATCDPEYYAQQQSLFLDFLDADLVT 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  +   +FF++S Y + LL   
Sbjct: 154 RKNARVNWDPVDMTVLANEQVIDGKG----WRSGAEVEQRDLTQWFFKISDYSEDLLDSL 209

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           ++   +   ++           GL
Sbjct: 210 DTLDGWPARVKLMQANWIGRSRGL 233



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 72/206 (34%), Gaps = 26/206 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP E+I   G D  R+F++ +    +D  +   G++          +  
Sbjct: 652 EKMSKSKRNTVDPDEIIATYGADTARWFVLSDSPPDRDVIWTDAGVQGAHR--FVQRLWR 709

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           LV R      +  D       + T     +  +  + L  +   +     + A+AQ+ +L
Sbjct: 710 LVHRVA----EGADRPGTDDASLT-----LRKITHKTLANVDTMIPALRNNAAVAQIYTL 760

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+ +++  D               S       E I     ++   +P LA + +  L   
Sbjct: 761 VNALEKAVDDN-------------SVSSQALGEGITITLQMIAPMMPHLAEECWVALGHD 807

Query: 481 D--ENRCFQSLDQRLKPGFMLHKTFD 504
               +  +   D  L     +     
Sbjct: 808 TMVGDTPWPDFDADLLAEDTVTLPVQ 833


>gi|262184706|ref|ZP_06044127.1| valyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 912

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 72/412 (17%), Positives = 131/412 (31%), Gaps = 35/412 (8%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
            IR   +      + +   +   G   +        L  + +    E      G      
Sbjct: 338 EIREALREQGRIVKEIRPYVHSVGHSERSGEPIEPRLSLQWFVAV-EKMAKMSGDAVREG 396

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
              +     E  +F             +      +PI    E     +  +  L    + 
Sbjct: 397 DTTIHPKSLEPRYFEWVDDMHDWCISRQLWWGHRIPIWYGPEGEDGQRD-IVCLGPDEEA 455

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            +  ++   DP  ++  W  +     +T G+ +       KF+P ++ V   DIL F   
Sbjct: 456 PEGYVQ---DPD-VLDTWFSSALWPFSTMGWPEKTA-DLEKFFPTNVLVTAYDILFFWVA 510

Query: 274 YWPAFLLSANL----------------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
               F   A                  P             +G K+SKSLGN IDP++ +
Sbjct: 511 RMMMFGTFAGAHTPELLGEGKNGRPQVPFTDIYLHGLVRDEQGRKMSKSLGNGIDPMDWV 570

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            + G DALR+ L R    G D     D        + A  + N  ++   M        +
Sbjct: 571 RDYGADALRFTLARGANPGVDLPLAVDA--AAAGRNFATKLFN-ATKFALMNGAGV-AKL 626

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK--- 432
           P   A T++D  IL     V  ++   + +    +A   +   V +   D Y +  K   
Sbjct: 627 PARDALTDADRWILDRSEEVRAKVDVYLDDYQFAKANELLYHFVWDELCDWYLEIAKTQI 686

Query: 433 PWELKKTNPDRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           P +    + +  +   T   V   V+  +  LL   +P +   ++  L   +
Sbjct: 687 PRDFDGASAEEQATGRTTQIVLGRVLDLVLRLLHPTMPFVTEVLWKALTGGE 738



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 23/163 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E E   I         Q H+GHA +  + D + R  R+ G   L+  G D  G      
Sbjct: 47  SEAEPYSIVLPPPNVTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTK 106

Query: 62  AQNA----------GVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                + F+++                R + D +D S + F  T + 
Sbjct: 107 VEARLREQEGKKRWDYEREEFINKVWEWKEEFGGTIQNQMRAIGDSVDWSRERF--TLDD 164

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++K + D+G IY+      +S   E   +D EV  
Sbjct: 165 GLSRAVQTIFKTLYDEGMIYQANRLVNWSPVLETAVSDIEVVY 207


>gi|163787206|ref|ZP_02181653.1| isoleucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877094|gb|EDP71151.1| isoleucyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 1134

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 98/277 (35%), Gaps = 8/277 (2%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIYWP 276
                 ++ VW D+ +       Y           + +PAD    G D     F+ ++  
Sbjct: 597 MKRESDLIDVWFDSGSMPYAQWHYPFENKNLIDNNEAFPADFIAEGVDQTRGWFYTLHAI 656

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             ++  ++     V +   +   G+K+SK LGN  DP E + + G DA R++++      
Sbjct: 657 GTMVFDSVAYKNVVSNGLVLDKNGQKMSKRLGNATDPFETLSKYGADATRWYMIMNANPW 716

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            +  +D DG+ +                ++   + D++            E D  ILS  
Sbjct: 717 DNLKFDSDGIAEVSRKFFGTLYNTYSFFTLYTNIDDFNYSEADILLEERPEIDRWILSEL 776

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + +++++ +        +A   + +   +   + Y    +    K        +      
Sbjct: 777 NTLIEKVDKFYAEYEPTKAARAISNFTQDYLSNWYVRLSRRRFWKGDYQTDKISAYQTLY 836

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  +A L     P   ++++  L    +   F+S+
Sbjct: 837 TCMETIAKLGAPIAPFFMDRLYLDLNAVTKKERFESV 873



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +            N  P + H     I D+  R+  + G  V    G D HG  +   
Sbjct: 38  EGKPPYVFFEGPPSANGLPGVHHVLARAIKDIFPRYKTMKGFQVKRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + D+   +   +  DD   T + ++
Sbjct: 98  VEKELGITKEDIGTKITVEEYNEACKKAVMRYTDIWNDLTQKMGYWVDMDDPYITYKSKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            ++   L K+I DK  +YKG     YS +
Sbjct: 158 MESVWWLLKQIYDKNLLYKGYTIQPYSPK 186


>gi|159036236|ref|YP_001535489.1| methionine--tRNA ligase [Salinispora arenicola CNS-205]
 gi|157915071|gb|ABV96498.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 659

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 91/542 (16%), Positives = 179/542 (33%), Gaps = 46/542 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +   + +  +   PN + H+GH A   + AD+  R     G  V    GT  H  ++A 
Sbjct: 127 TDDRPVLLLPSFPTPNGELHLGHLAGPYLGADIARRALAATGTPVHLLLGTVGHQSQVAA 186

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA  A V+     +QN+             +D F+R T   +    R +++++ D G + 
Sbjct: 187 AATAAQVSFHTLAEQNTDAIMAGLAAAGAEWDVFVRPTSPEYPALARRVFERLRDDGVVL 246

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQY-------------------------YNAQHN 155
                  +    + +  +  +                                      +
Sbjct: 247 TRTTPTHHCPHCDRFLFEAFLAGACPHCGSYDTAGIECESCALPFADTDLIDVTCATCGS 306

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P +      YF  L   +D+L +Y  +           + V++     +    ++     
Sbjct: 307 PAERRPLTRYFLPLEPLRDRLTAYLRTVRMGSRLAGYVDRVLANRLPDMLVSIVADD--- 363

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFW-----PADLHVIGKDILR 269
            GI++P      +Y   +    YLT    L    G    + +     P  +   G D   
Sbjct: 364 -GIEVPGTDGQRLYSAFELAARYLTAVDRLARDQGESGWESYLTGRRPRTVLFFGFDNAY 422

Query: 270 FHAIYWPAFLLSAN--LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
              I +PA L +      LP  + S+ F    G K S    + I   +  ++   D LR 
Sbjct: 423 LRTIVFPAVLGAFTDLAQLPDTLVSNEFYELDGAKFSTGRRHAIWARDAFDDKSRDRLRL 482

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +L       +   +        V  +L  G+   +    + + + + G  P  G++    
Sbjct: 483 YLAATRPEYRRRSFSTAEYDLFVQHELVEGLDGWLGGINARLDRHFAGAAPEAGSWIPEA 542

Query: 388 ESILSVCSRVLQEIRENMQNQLIH--RALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           E        +  E    +         A+A V+S V+   R+ +  +      T    A 
Sbjct: 543 EEFYGRIRALHAEAGSALGLGRFSPATAVAAVLSFVAAGRRFGEVAEDILAAPTLTGPAR 602

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           T + + +  +R +A +L+  VP  A+++   L             + ++PG         
Sbjct: 603 TCMALELMAVRTVAEVLRPLVPGAADRLAGQLGGVGTATN----PEWVRPGT--PARVSA 656

Query: 506 IF 507
           +F
Sbjct: 657 LF 658


>gi|15646154|ref|NP_208338.1| leucyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024678|sp|P56457|SYL_HELPY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2314727|gb|AAD08585.1| leucyl-tRNA synthetase (leuS) [Helicobacter pylori 26695]
          Length = 806

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPDYTKFEQRFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LEDHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 105/381 (27%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+      G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCNHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFTQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKNGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    + I            +  E+ +         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKANAINPTTSKPEFKEVSLNEAQKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|300309767|ref|YP_003773859.1| valyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072552|gb|ADJ61951.1| valyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 971

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 126/391 (32%), Gaps = 84/391 (21%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG FF   +  +  L    S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 404 PEGTFFPGKSIAETALEKVSSGEIKFVPENWTNT-YNQWLNNIQDWCISRQ-LWWGHQIP 461

Query: 220 IPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPDGSKAK 254
              D    +YV                         W  +     +T G+ +        
Sbjct: 462 AWYDEDGGIYVARTEEEARAQAGGRAVKRDEDVLDTWFSSALVPFSTLGWPEETP-DYKL 520

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F P+ + V G DI+ F    +       +  +P              G+K+SKS GN +D
Sbjct: 521 FLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFDTVYVHGLVRDASGQKMSKSKGNTLD 580

Query: 313 PIEVIEEVGVDAL-------------------------------------RYFLVREIAC 335
           PI++I+ +GVD L                                     R+        
Sbjct: 581 PIDLIDGIGVDELVAKRTVGLMNPKQAASIEKATRKEFADGIPAFGTDALRFTFASLATL 640

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG---------MIPTPGAFTES 386
           G++  +D +  +     +  N + N  +R V M  +  D                 F+++
Sbjct: 641 GRNINFDLNRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGFDGHEKGVCDKEKLQFSKA 697

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  I+S+  R   E+ +   +         +   V +   D Y +  K  +++  N  + 
Sbjct: 698 DRWIVSLLQRTEAEVEKGFADYRFDNIATAIYKFVWDEYCDWYLEMAKA-QIQSGNEAQQ 756

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                  + V+  +  L    +P +  +++ 
Sbjct: 757 RATRRTLLRVLESVLRLAHPVLPFITEQLWQ 787



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+    I           H+GHA+   I D L R+HR+ G +  +  GTD  G       
Sbjct: 68  EKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMRGYNTAWIPGTDHAGIATQIVV 127

Query: 63  QNAGVTTK---------VFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +      K          FV++                R M    D + + F  T + + 
Sbjct: 128 ERQLDAQKVSRHDLGREKFVEKVWEWKEKSGSTITGQMRRMGASTDWAREYF--TMDPKM 185

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 186 SKVVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGSMWHIKYPL 240


>gi|226356378|ref|YP_002786118.1| leucyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318368|gb|ACO46364.1| putative Leucine--tRNA ligase (Leucyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 831

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 6/177 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF  G D  G     AA  
Sbjct: 49  EKHYALTMFPYPSGNLHIGHWYANVAPDARARWMRMRGYNVLFPMGFDAFGLPAENAAIK 108

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +    +   N  +       +   I +     T +  ++   +  + +   +G  YK 
Sbjct: 109 NNLDPAKWTYSNIEHMTGQFRRMGTMIDWSRKFATCDPEYYRWNQWFFTEFFRRGLAYKK 168

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                +  +D+    +++V  G            V+      ++ +++ Y D+LL +
Sbjct: 169 DGLVNWCPKDQTVLANEQVVNGH----CERCGTAVERRNLSQWYLKITDYADELLDF 221



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 115/336 (34%), Gaps = 47/336 (13%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIE------RRNEVISFVKSGLKDLSLSRKT 213
                +      Y    +           P+       R  E + F  +G   L L+R  
Sbjct: 432 YRLRDWLVSRQRYWGTPIPIVYCAEHGAQPVPAEELPVRLPESVEFTPTGQSPLKLNRDW 491

Query: 214 FDWGIKIPDDP----QYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
                 +   P       M  ++D+      YL+        D + A   P DL+  G +
Sbjct: 492 VQTTCPVCGGPAERDTDTMDTFVDSSWYMYRYLSPHSEGHPFDPAHAHLLPVDLYTGGIE 551

Query: 267 ILRFHAIY---WPAFLLSANLPLPKKVFS-----HGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   W   +    L    + F+        +    EK+SKS GNV+DP +++ 
Sbjct: 552 HAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMILGEDNEKMSKSRGNVVDPDDLVR 611

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           E G D +R FL+        G +D  G+         NG    +SR  ++  +  D    
Sbjct: 612 EYGADTVRTFLMFIAPWELGGPWDSQGI---------NGPAKWLSRVWNLYFE--DKTTG 660

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                TE+D  +       L ++  + +    +  +A ++ L + +             K
Sbjct: 661 PEENITEAD--LRHAVHSALAKVNGDFERMSFNTIIATLMELTNIL----------VKAK 708

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +P  ++       E +    ++L    P +A +I+
Sbjct: 709 RSPVASTAAWD---EALGIFNLMLAPIAPHIAEEIW 741


>gi|298737166|ref|YP_003729696.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356360|emb|CBI67232.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 806

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 105/377 (27%), Gaps = 38/377 (10%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDSALEGAHR--FIKRLYDKANAITPTTSKPEFKEVSLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ +                   A     +  E    L  +
Sbjct: 670 NKAESAYTFNTLIASCMEALNALS------------------AQNNERILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILF 478
           L+  +P  A ++ + LF
Sbjct: 712 LEPIIPHTAWELSERLF 728


>gi|237751536|ref|ZP_04582016.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372902|gb|EEO23293.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 827

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 6/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI +   YP+   H+GH     I D +AR++R+ G +VL   G D  G     AA
Sbjct: 41  SKPKKYILSMFPYPSGAIHMGHVRNYCIGDAMARYYRIYGYNVLHPIGFDAFGMPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K +   N          + +S+  +  + T +  +    +  + K   KG +Y
Sbjct: 101 IKHKIHPKDWTYSNMEVMLKELQTMGLSFSKERVLETCDPIYSKYEQEFFIKAWQKGLVY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G           PV   E   Y+ +++ Y ++LL+  
Sbjct: 161 RKKAFLNWCPNDLTVLANEQVIDGK----CWRCDTPVVQKEMYQYYLKITDYAEELLNDL 216

Query: 181 ESHPEFILPIERRNEVISFVK 201
           ES      P     +     K
Sbjct: 217 ESLEGKWPPQVLSMQRNWIGK 237



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 91/260 (35%), Gaps = 35/260 (13%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T              S   F   D ++ G +    H +Y   +         +S
Sbjct: 516 WYFLHYTTPKELRKDKAFCAESLQYFMEVDEYIGGIEHAILHLLYARFYTKMLRDLGYIS 575

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    + + G +L  G K+SKSLGNV++P  +IE  G D  R F++          +
Sbjct: 576 FSEPF-SHLLTQGMVLKDGVKMSKSLGNVVEPRHIIESYGADTARLFILFAAPSSYALDW 634

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE- 400
           + + +           I  L+ R V +   +    I T     +S  + L V   + ++ 
Sbjct: 635 NDNSVVGC-----YKFICRLIDRKVRVKKCETLPKIDTQKLNKDSKTARLKVYEALQKQQ 689

Query: 401 --IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
               + ++    +  +A  +                 L   + D       V  E    L
Sbjct: 690 NMFNKKIEGYPFNVVIAACME------------AHNALSAQDDD------LVFTEGYFIL 731

Query: 459 AILLQAFVPKLANKIFDILF 478
             +L+ F+P +A+++   LF
Sbjct: 732 LHILENFIPHIASELSQELF 751


>gi|124023208|ref|YP_001017515.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166231629|sp|A2C9U0|SYL_PROM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123963494|gb|ABM78250.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 878

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +++ Y  +   YP+ + H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 44  TNQKRFYALSMFPYPSGKLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENA 103

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    + DQN    R   D L   I +D    T  + ++   + L+ ++   G  
Sbjct: 104 AIARNVDPGDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYRWTQWLFLELFAGGLA 163

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+  + + +F R++ Y D L+  
Sbjct: 164 YQKEATVNWDPIDKTVLANEQVDGE---GRSWRSGALVEQRQLKQWFLRITDYADALIDD 220

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 221 LDELTGWPERVRTMQANWIGRSHG 244



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 20/183 (10%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANG 357
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++   R    L   
Sbjct: 628 FEKMSKSKYNGVDPAVVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLIRL 687

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQ-NQLIHRAL 414
           I + V                T  +   S+E I         ++ I E++  +  ++ A+
Sbjct: 688 IDSFVWPKTDEDNASISSANLTISSADLSEEEINMRRATHMAIEAITEDLSGDIQLNTAI 747

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           ++++ L + +                 D+  T   V  E +  L  L+  F P LA + +
Sbjct: 748 SELMKLSNSL-------------GGKLDKVRT--EVAAEALSVLVRLMAPFAPHLAEEFW 792

Query: 475 DIL 477
             L
Sbjct: 793 MKL 795


>gi|150025746|ref|YP_001296572.1| valyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772287|emb|CAL43765.1| Valine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 875

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 72/386 (18%), Positives = 137/386 (35%), Gaps = 60/386 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F R+       +       E  L   R N         ++D ++SR+   W
Sbjct: 348 IEPRLSDQWFLRMEDLVKPAIKAVLETEEVKLYPSRFNNTYRHWLENIRDWNISRQ-LWW 406

Query: 217 GIKIP---------------------------------------DDPQYIMYVWIDALTN 237
           G +IP                                        DP   +  W  +   
Sbjct: 407 GQQIPAYFYGDGKEDFVVAESIEEALVLAKAKTNTQNLTIQDLRQDPDA-LDTWFSSWLW 465

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            +   G + NP+    K++ P +  V G DIL F    +    +  +   P      +  
Sbjct: 466 PMAVFGGITNPENEDFKYYYPTNDLVTGPDILFFWVARMIIAGYEYTGKKPFSNVYLTGL 525

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               +  K+SKSLGN  +P+ +IE+ G D +R  L+   + G D  +D++        + 
Sbjct: 526 VRDSQRRKMSKSLGNSPEPLGLIEKFGADGVRVGLLLSASAGNDIMFDEEL------CNQ 579

Query: 355 ANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             G  N +  +  +I   +    I  P +   + E   +   + L  I ++ +   I  A
Sbjct: 580 GKGFTNKIWNAFKLIKGWEVSETIAQPESSKVAIEWYEAKLQQTLLAIEDDFEKYRISDA 639

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           L  +  LV +     + +  KP   +  +    S      +E++     LL  F+P L  
Sbjct: 640 LMAIYKLVWDDFCSWFLEMIKPAYQQPID----SVTFAKAIEMLENNLKLLHPFMPFLTE 695

Query: 472 KIFDIL--FVADENRCFQSLDQRLKP 495
           +I+ I+     +E     +  + +KP
Sbjct: 696 EIWQIIAERTPEEALIISTWPE-IKP 720



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 46/158 (29%), Gaps = 18/158 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           R    I           H+GH     I DVL R  RL G +  +  GTD           
Sbjct: 31  RTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKVV 90

Query: 62  --------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                          +        + D+      +    L  S D      T +     +
Sbjct: 91  AKLKAEGINKNDLTREEFLKHAWQWTDKYGGTILEQLKQLGCSCDWNRTKFTMDPDMSAS 150

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +  + +KG IY+G     +    +   +D+EV  
Sbjct: 151 VIKSFVDLYNKGQIYRGYRMVNWDPEAKTTLSDEEVIF 188


>gi|261840237|gb|ACY00003.1| leucyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 806

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LEDHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVARERIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    + I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKANAIKSTTSKPEFKEASLNEAEKLARKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|322379139|ref|ZP_08053536.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380431|ref|ZP_08054633.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147142|gb|EFX41840.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148435|gb|EFX42938.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 815

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI + + YP+ + H+GH     I D LAR++R  G +VL     D  G     AA
Sbjct: 32  SKPKKYILSMMPYPSGEVHMGHVRNYAIGDALARYYRQVGYNVLHPMAFDAFGMPAENAA 91

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  K++ ++N  N ++    L  S+       T +  +    +  + ++  KG +Y
Sbjct: 92  IKHQIHPKIWTEKNIANMQEEFKALGFSFSKTREFATCDPNYTKIEQQFFIEMFSKGLVY 151

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G          + V   +   Y+ R++ Y ++LL   
Sbjct: 152 QKEAWLNWCPLDHTVLANEQVIDGK----CWRCGSAVVQKQMPQYYLRITKYAEELLEEL 207

Query: 181 ESHP-EFILPIERRNEVISFVKSGL 204
           ++    +   +    E       GL
Sbjct: 208 KNLKGSWPTQVLSMQEQWIGKSEGL 232



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 92/293 (31%), Gaps = 31/293 (10%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
             +   KS    L               D  +    +    T              +   
Sbjct: 467 NPLDKHKSFKHCLCPKCGQEARRETDTMDTFFQSSWYFLRYTTPPKLWDKQAFDLDALDY 526

Query: 255 FWPADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKS 306
           +   D ++ G +    H +Y   F         L  N P  + + + G +L  G K+SKS
Sbjct: 527 WMEVDEYIGGIEHAILHLLYARFFTKALRDLGYLHINEPF-QALTTQGMVLKNGAKMSKS 585

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV+ P E++E+ G D  R ++       K+  ++   L+       A  +     +  
Sbjct: 586 KGNVVTPQEILEKYGADIARAYIHFVAPPNKELEWNDQALEGA-----ARFLKRFYEK-- 638

Query: 367 SMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           S + K    +        +++++         LQ+  +       H     +++   E  
Sbjct: 639 SFLAKACKQLPFLDVNNLSDAEKEARKKIYLALQKCHDIFDKVQPHYPFNTLLAFCMEAL 698

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +                T   +  E    L  +L+  +P + ++I   LF
Sbjct: 699 NALEKT--------------TNSALWTEGYYILTHVLEPLIPHVCHEISKRLF 737


>gi|194754701|ref|XP_001959633.1| GF11945 [Drosophila ananassae]
 gi|190620931|gb|EDV36455.1| GF11945 [Drosophila ananassae]
          Length = 1048

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 71/421 (16%), Positives = 125/421 (29%), Gaps = 97/421 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 452 PICSRSKDVVEPLIKPQWYVNCSDMAASATEAVRSGALKIVPEHHTKTWY-HWMDGIRDW 510

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 511 CVSRQ-LWWGHRIPAYHVSFSDPSIQTGSADDEQYWIVARSEEEALAKASERFGVEASKI 569

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ D        F+P  L   G DIL F    + +  
Sbjct: 570 ILKQDEDVLDTWFSSGIFPFSVFGWPDKTK-DLETFYPTSLLETGHDILFFWVARMVFFG 628

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 629 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPR 688

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + ++        N + N
Sbjct: 689 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVQG--YRFFCNKLWN 746

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++      + +D  +       + D  ILS  S  ++   +  +      A +   
Sbjct: 747 ATKFALLYFNGTEKFDTELAASEVVNQMDAWILSRLSAAIEACNQGFETYDFAAATSACY 806

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D Y +  KP     +   +A+         +     LL  F+P +  +++  
Sbjct: 807 AFWLYDLCDVYLECLKPIFQSGSEQQQAAA-RRTLYVCLDYGLRLLSPFMPFITEELYQR 865

Query: 477 L 477
           L
Sbjct: 866 L 866



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 129 NFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 188

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    L  SYD      T + +     
Sbjct: 189 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPKLCRAV 248

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 249 TEAFVRLHEEGSIYRSSRLVNWSC 272


>gi|261838834|gb|ACX98600.1| leucyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 806

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGVHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 107/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVARERIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    + I            +  E  +         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKANAINPTTSKPEFKEVSLNEVQKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ ++                  A     +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALN------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|242003968|ref|XP_002422927.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212505820|gb|EEB10189.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 841

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 10/235 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y+ +   YP+   H+GH     I+DVLARF R+ G +V+   G D  G     AA
Sbjct: 62  DKEKFYVLSMFPYPSGSLHMGHVRVYSISDVLARFFRMRGKNVIHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +  QN  N + + + L  S+D      T +  ++   + L+ K+ ++G +Y
Sbjct: 122 FEKGINPDEWTQQNIANMKSVMEKLCFSFDWSREFATCDSDYYKWTQFLFLKLYERGLVY 181

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     D++V               V+    + +F + +++   L    
Sbjct: 182 RKEAVVNWDPVDLTVLADEQVDAN---GRSWRSGAIVEKKLLKQWFVKTTSFSQLLYDGL 238

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           E             E+    ++ +  L  +   F+    + +  +  + +W+   
Sbjct: 239 EDPILED-----WKEIKPIQRNWIGKLDGTFINFEIVGHVENCREKEISIWLKRP 288



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 80/208 (38%), Gaps = 19/208 (9%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--R 349
           +   ++   EK+SKS  N ++P E+IE  GVDALR  ++ E A      +D+   +    
Sbjct: 590 TGNPVVMNWEKMSKSKYNGVEPSEMIENYGVDALRTVILAEAAPRSSLNWDEKSFRNILM 649

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-Q 408
             + L + +       V                F + D  +    +  +++I   ++   
Sbjct: 650 WQSKLWDAVKKF--NDVRSKSATNPSKDERSEEFKKLDLYLYDSRNFYVKKITSLLEKTF 707

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            +  A+A++  L +             L+K + +  + +     + +    I+L    P 
Sbjct: 708 SVSVAIAKMQGLTN------------SLRKADEETMA-LSENYEKALATQIIMLAPIAPS 754

Query: 469 LANKIFD-ILFVADENRCFQSLDQRLKP 495
            A++++   L   +     + ++   KP
Sbjct: 755 FASELWSGFLKAPNRLSKEEGIEWWDKP 782


>gi|15612517|ref|NP_224170.1| leucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919983|sp|Q9ZJ63|SYL_HELPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4156066|gb|AAD07021.1| LEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 806

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 114/392 (29%), Gaps = 38/392 (9%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA+R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAVRLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+          + +  +       K     +    A   + + +     +  +  
Sbjct: 612 NDNALEGAHR--FIKRLYDKANAITPTTSKPEFKEVGLNEAQKLARKKVYEALKKSHEIF 669

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ ++                  A +   +  E    L  +
Sbjct: 670 NKAESAYAFNTLIASCMEALNALN------------------AQSDEQILCEGYFVLLQI 711

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
           L+  +P  A ++ + LF  +  +  +  +  L
Sbjct: 712 LEPMIPHTAWELSERLFKRENFKPIEVDESAL 743


>gi|293400597|ref|ZP_06644742.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305623|gb|EFE46867.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 799

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 86/253 (33%), Gaps = 16/253 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKFYVLDMFPYPSGNGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N  +FR+    L  SY  D  I TT+  ++   + ++ ++  KG  
Sbjct: 90  AIQTGNHPAEFTKKNVDHFREQIQSLGFSYDWDREISTTDPDYYKWTQWIFLQLYKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G           PV       +  +++ Y ++LL  
Sbjct: 150 YVDEIPVNWCPELGTVLANEEVIDGKS----ERGGYPVIRKPMRQWVLKITEYAERLLED 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E         E +   I   +              + IK  D    +     D L    
Sbjct: 206 LELCDWPQSTKEMQINWIGKSQG---------ANVIFKIKNTDKEFTVFTTRCDTLFGAT 256

Query: 240 TTTGYLDNPDGSK 252
                 ++P   +
Sbjct: 257 YCVMAPEHPYVDE 269



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/449 (12%), Positives = 132/449 (29%), Gaps = 62/449 (13%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  + +     + +  DIS + F     +            +
Sbjct: 331 YGTGAIMAVPAHDTRDYEFAKKFNIEIIPVLEGGDISKEAF----TEDGVHVNSAFLNGM 386

Query: 114 SDK---GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
             +     + K             Y   D ++              ++            
Sbjct: 387 GKQEAIDTMIKWLEEHHCGCAKTTYKLRDWLFSRQRYWGEPIPIIHMEDGTTRTVDIDEL 446

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +      ++ +     P+    + ++    G+K    +     W        +YI   
Sbjct: 447 PLELPETKIFKPNANGESPLAHCEDWLNVEIDGVKGKRETNTMPQWAGSCWYYLRYI--- 503

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSA 282
                             +     + P DL+V G +    H +Y   +         +  
Sbjct: 504 --------DPKNHEAIADEKLLEHWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVKT 555

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  K       +    EK+SKS GNV++P +++E  G DALR + +          + 
Sbjct: 556 KEPFQKLFHQGMILGENNEKMSKSRGNVVNPDDIVESHGADALRVYEMFMGPLEAALPWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             GL         +G    + R   +  +             E+D  +  V    ++++ 
Sbjct: 616 TTGL---------DGSRKWLERVWRLYTE-------QNKLAKENDGKLDKVYHATVKKVT 659

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +++   ++ A++Q++  ++E  +                 A T+     E  +    + 
Sbjct: 660 HDVETLNLNTAISQMMIFINECYK-----------------ADTIYE---EYAKGFLKMF 699

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
             F P +  +I+  +F  ++   ++    
Sbjct: 700 ACFAPHMGEEIWQDVFHGEQTIAYEPWPT 728


>gi|296110539|ref|YP_003620920.1| leucyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832070|gb|ADG39951.1| leucyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 803

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+ Q  H+GH       D+++RF R  G +VL   G D  G    +
Sbjct: 28  TNKPKYYAVDMFPYPSGQGLHVGHPEGYTATDIMSRFKRTQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  QN  +FR+    L +SYD    I TT+ + +   + +++K+ +KG 
Sbjct: 88  YALKTGHNPADFTSQNVAHFREQIKSLGLSYDWNREINTTDPKFYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D     ++EV  G          N V+      +  +++AY D+L+ 
Sbjct: 148 AYESNMMVNWDPIDRVVLANEEVIDGKS----ERSGNKVERKALRQWVLKITAYADRLVD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E++   I   K
Sbjct: 204 DLDDLDWPEAIKEQQRHWIGRSK 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 111/285 (38%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPHNDEVLADSDKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P +++   G D LR + +      ++  + +
Sbjct: 557 EPFQKLVNQGMILGANHEKMSKSKGNVVNPDDIVAAFGADTLRVYEMFMGPLTQNKPWSE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +G+               + R   +++ D D +      +   D  +  + ++ ++++ E
Sbjct: 617 EGITGS---------RRWLDRVWRLLIDDNDRLRDHVTTYNPGD--LDKIYNQTVKKVTE 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  V+E              K++         + ++ +     LL 
Sbjct: 666 DLENMRFNTAISQMMVFVNEA------------YKSDA--------LPLDYMNGFIQLLA 705

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            F P LA +++  L   + +  + +     +   ++  T + IF 
Sbjct: 706 PFAPHLAEELWVRLG-NEASISYVTWPTYDQA-QLVDDTVEIIFQ 748


>gi|15806352|ref|NP_295058.1| isoleucyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81551300|sp|Q9RUP8|SYI_DEIRA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|6459088|gb|AAF10907.1|AE001980_2 isoleucyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 1078

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 74/472 (15%), Positives = 146/472 (30%), Gaps = 40/472 (8%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV--FVDQNSRNFRDMADVLDISYDDFI-RT 97
               V    G D+HG       Q           +                    F  RT
Sbjct: 375 RAYGVPLMFGVDDHGILQVTHEQGKFFKDADKGLIADMKARGLMFWAGTLKHRYPFHDRT 434

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +                     KG Y     +  E    ++++        +    N +
Sbjct: 435 GDP--------------ILYFAKKGWYIRTSQVAGEMLAQNEKINWVPGNIKHGRFGNWL 480

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +      +      Y    L +++S    +  I    E+       L DL L R   D  
Sbjct: 481 EGN--VDWAISRERYWGTPLPFWQSESGQLRVIGSVAELSELAGRDLSDLDLHRPYIDDI 538

Query: 218 IKIPDDPQY-----IMYVWIDALTNYLTTTGYLDNPDGS-------KAKFWPADLHVIGK 265
               D  +Y     ++ VW D+ +      G L N  G         AK +PAD      
Sbjct: 539 TFTLDGEEYRRVPEVLDVWFDSGSMPYAQWGLLLNEQGEAVRGAEQFAKHYPADYICEAI 598

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F++++  + +L         +     +  KG K+SKS GNV+ P+ + ++ G D
Sbjct: 599 DQTRGWFYSLHAISTMLYDQPAYKNVICLGHIVDEKGLKMSKSKGNVVAPLPLFDQYGAD 658

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PT 379
           ++R+++      G    +  + L         N + N+ S  V  +  + D       P 
Sbjct: 659 SVRWYMFMASDPGDQKRFS-ERLVAEAQRSYVNTLWNVYSFFV--LYANLDQPDLAAAPA 715

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                E D  +L+     ++++   +++         +   V ++  ++  +        
Sbjct: 716 VAERPEMDRWLLARLEETVRDVTAALESYDARSGGRALEGFVDDLSNWYVRRSRSRFWGE 775

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                +       E +  ++ L   F P LA+ ++  L   + +        
Sbjct: 776 GGTVDTAAYATLHEALLVVSQLTAPFTPFLADALYRNLSGEESSVHLTPWPT 827



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 11/107 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N +P + H       D+  RF  + G  V    G D HG  +  + +        +
Sbjct: 51  PPTANGKPALHHVLARSFKDLFPRFKVMQGHHVTRKGGWDTHGLPVEISVEKKLG----W 106

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           + +N    R+  +     ++   RT+     +T +   +     G  
Sbjct: 107 LGRNHGASREELE----EFNRLCRTS---VWETIQDWNELTERMGYW 146


>gi|308062828|gb|ADO04716.1| leucyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 806

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKHFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDSALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKT 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|254780079|ref|YP_003058186.1| leucyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001992|emb|CAX30251.1| Leucine tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Helicobacter pylori B38]
          Length = 808

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 31  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 91  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 151 KAMLNWCPNDKTVLANEQVIDGK----CWRCDTEVVQKELYQYYLKITNYAEELLKDLET 206

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 207 LEDHWPSQVLIMQKNWIGKSSGLQ 230



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 106/377 (28%), Gaps = 38/377 (10%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 384 WSNLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 443

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 444 QLPVTLPEDIVIDGEGNPLERHASWKFAQCPKCHKDALRETDT---------MDTFIQSS 494

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L 
Sbjct: 495 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLH 554

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 555 LDEPF-KQLITQGMVLKNGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 613

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          + +  S       K     +    A     + +     +  +  
Sbjct: 614 NDSALEGAHR--FIKRLYDKASAITPTTSKPEFKGVSLNEAQKLGRKKVYEALKKSHEIF 671

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            +       +  +A  +  ++ ++                  A T   +  E    L  +
Sbjct: 672 NKAESAYAFNTLIASCMEALNALN------------------AQTNEQILCEGYFVLLQI 713

Query: 462 LQAFVPKLANKIFDILF 478
           L+  +P  A ++ + LF
Sbjct: 714 LEPIIPHTAWELSERLF 730


>gi|171676113|ref|XP_001903010.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936122|emb|CAP60782.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1058

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 105/301 (34%), Gaps = 45/301 (14%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP   +  W  +    +   G+ +       KF+P +L   G DIL F    +   
Sbjct: 573 TLEQDPD-CLDTWFSSGLWPMAILGWPNTEKDDFKKFFPTELLESGWDILFFWIARMIML 631

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------- 317
           +  L+  +P  +          +G K+SKSLGNVIDP+++I                   
Sbjct: 632 SLKLTGKVPFTEVYCHSLIRDAEGRKMSKSLGNVIDPLDIINGIKLEDLHAKLLTGNLRS 691

Query: 318 ------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
                              E G DALR+ L+     G D  +D   +         N + 
Sbjct: 692 DEVERATKYQKQSFPGGIPECGADALRFTLLSYTTGGGDINFDIRVMAA--YRRFCNKVW 749

Query: 360 NLVSRSVSMILKDYDG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                 +  +   +         A +  +  I+   +  ++ I E + N+    A   V 
Sbjct: 750 QASKYVLGNLGDSFKPDAQLDLAALSVPERWIVHRTNAAVKGINEALTNRQFSTATRLVY 809

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           SL      D + +  K       +P +A++V  V   V+     LL   +P +  +++  
Sbjct: 810 SLFYDDFCDIFVENSKGMLGPDADPAQANSVRQVLYFVLDTCLRLLHPMLPFITEELWQR 869

Query: 477 L 477
           L
Sbjct: 870 L 870



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN- 64
           K  I+          H GHA    + D L R++R+ GL  L+  G D  G       +  
Sbjct: 133 KFVIALPPPNVTGALHCGHALANSLQDTLIRWNRMKGLSTLWVPGCDHAGIATQSVVEKM 192

Query: 65  ---------AGVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRHHDTC 106
                      +  + F  +      +  + ++         + +     T ++      
Sbjct: 193 LYKREKKTRHDLGREEFTKRVWEWKGEYHERINNAQRLMGGSMDWSREAFTMDENLTAAV 252

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              +  + D+G IY+      +S  
Sbjct: 253 MEAFVTLHDEGLIYRSNRLVNWSTH 277


>gi|282882074|ref|ZP_06290715.1| leucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298104|gb|EFA90559.1| leucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 803

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R K+Y+     YP+ Q  H+GH       D++AR  R  G +VLF  G D  G      
Sbjct: 30  DRGKIYLLVEFPYPSGQGLHVGHPRPYTALDIVARKRRYQGYNVLFPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   QN ++F+D    +  S+D    I TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNKIHPAIVTKQNIKHFKDQLKSIGFSFDWSREINTTDPEYYKWTQWIFLQLYKHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV     G      +  V    +  +  +++ Y D+L+  
Sbjct: 150 YKKESPINWCPSCKTGLANEEVI----GGKCERCNTEVVRRVKSQWMLKITGYADRLIDD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +          ++   I   +
Sbjct: 206 LDDVDYIERVKTQQKNWIGRSE 227



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 109/343 (31%), Gaps = 65/343 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E       G   L+  +
Sbjct: 415 FKLRDWVFSRQRYWGEPIPIVHCPKCGFVPVPEEQLPLLLPEVENYEPTDDGESPLANIK 474

Query: 212 KTFDWGIKIP----DDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +                M  W         Y                +W P D +  
Sbjct: 475 EFVETTCPKCGCHAHRETDTMPQWAGSSWYFLRYADPHNKDALASKDALNYWTPVDWYNG 534

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    EK+SKS GNV++P +
Sbjct: 535 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYVKRTSHGMILGENNEKMSKSRGNVVNPDD 594

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D LR + +      K   + + G+  R      + + NL     S IL D D 
Sbjct: 595 IVRDYGADTLRTYEMFIGDFEKPVPWMETGV--RGCRRFLDRVWNL-----SDILVDGDK 647

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
                       ES+  +  + ++++  + +N   + A+A ++SL++E   ++       
Sbjct: 648 YS----------ESLEKLIHKTIKKVSYDYENLKANTAIAALMSLLNEFVANKNIT---- 693

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
               K +               R   +LL    P +  ++++ 
Sbjct: 694 ----KAD--------------FRTFLMLLNPVAPHITEELWEQ 718


>gi|308064327|gb|ADO06214.1| leucyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 806

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   ++
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLKA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|268562850|ref|XP_002638684.1| C. briggsae CBR-LRS-2 protein [Caenorhabditis briggsae]
          Length = 821

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 5/185 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI +   YP+ + HIGH     I+D  AR++RL+G  V+   G D  G     AA+N
Sbjct: 25  EKKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYRVIHPIGWDSFGLPAENAARN 84

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV  + +  QN    R       I +D    I T E   +   + ++ ++ + G + + 
Sbjct: 85  NGVDPREWTIQNIETMRRQLKATQIQFDWNREISTCEPEFYRWTQWIFCRLFENGLVRRT 144

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+     +++    +           +  +   +      Y  +L      
Sbjct: 145 QAEVNWDPIDQTVLAAEQI---DNEGRSWRSGAVAEKKKLSQWMIETPKYAKRLQEGLRK 201

Query: 183 HPEFI 187
             E  
Sbjct: 202 MSEQW 206



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 20/177 (11%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +D +E++   G+D  R  ++   A      + +  LK      L + I  
Sbjct: 537 EKMSKSKNNGVDLVELLTTDGIDLTRLRILEAAAPRAPINWGETDLKGA--KKLLDRIAT 594

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + S  +   +   +            D  I    +  ++ +   ++   +H     ++ L
Sbjct: 595 MTSDVIKSRVASSEFKKDPN-----IDSQIKETYNFFVRNVGMCLEVLHLHN--TALMRL 647

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +          LKK +P   +      +  +R L I+LQ F P +A +++  L
Sbjct: 648 QGFTN---------ALKKIDPVYLAN-SEEGIRAVRSLIIMLQ-FCPHVAAEMWTAL 693


>gi|326477147|gb|EGE01157.1| valyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 1048

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 112/357 (31%), Gaps = 48/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E     +    +    ++  +  + + K F     +    
Sbjct: 506 WCLSRQLWWGHQAPAYFVDIEGEKGDDADGNLWVTGRTEEEARAKAEKKFPGKKFVLKRD 565

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+           +P  +   G DIL F    +      ++ 
Sbjct: 566 PDVLDTWFSSGQWPYSTLGWPKKTH-DLENLYPVSILETGWDILFFWVARMIMLGIKMTG 624

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P  K+V+ H  I   +G K+SKSLGNV+DPI+V+                        
Sbjct: 625 QVPF-KEVYCHSLIRDSEGRKMSKSLGNVVDPIDVMNGISLQKLHDKLLEGNLAEKEVAI 683

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR+ L+     G D  +D   +         N I      
Sbjct: 684 ATKFQKKAFPKGIPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKF 741

Query: 365 SVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +  +  D+         G  + S+  IL   ++  +   E ++N+    A   +     
Sbjct: 742 VLGKLGDDFKPQATPSKTGKESLSERWILHKFNQAAKLTNEALENREFSVAANTIYQYWY 801

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  K       +P    +        +     L+   +P +  +++  L
Sbjct: 802 SQLCDVFIENSKSLLQPDADPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 858



 Score = 39.8 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 40/149 (26%), Gaps = 37/149 (24%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K +E  Y    I  PN     H+                R+    VL+  G D  G    
Sbjct: 135 KVKEAGYFVIPIPPPNVTGALHM----------------RMREKTVLYLPGYDHAGYLTQ 178

Query: 60  KAAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +     T                   +  +   +       L  S+D      T ++
Sbjct: 179 SVVEKILWKTEKKSRHDIGREAMVGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDE 238

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+G     + 
Sbjct: 239 NLSAAVTETFVRLHEEGTIYRGNRLVNWC 267


>gi|51473609|ref|YP_067366.1| leucyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|60390688|sp|Q68WV8|SYL_RICTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51459921|gb|AAU03884.1| Leucine translase [Rickettsia typhi str. Wilmington]
          Length = 828

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 81/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K Y+   + YP+ + HIGH     I DV+ARF  + G +VL   G D  G     A
Sbjct: 24  SSKPKYYVLEMLPYPSGKIHIGHIRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       + +   N    +     +  SYD    I + + +++   +  + ++ D+  +
Sbjct: 84  AIQNNSRPQDWTYSNIEYMKKQLQSMGFSYDWTREINSCDPQYYKHEQKFFLELYDRDLV 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V  G            ++      +F +++ Y ++LL+ 
Sbjct: 144 YQKESLVNWDPVDNTVLANEQVVNG----RGWRSGAIIEKRYLNQWFLKITNYAEELLNE 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  ++   +    E      +G
Sbjct: 200 IQNLKDWPEAVRVMQEEWIGKSTG 223



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 123/374 (32%), Gaps = 33/374 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
             R  +          + C       +D      D+V    +        +   W     
Sbjct: 406 ISRQRFWGCPIPIIYCETCGIVPVPYKDLPVTLPDDVSFDNNYNPLEHHPS---WKHVNC 462

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                 A ++           +       N  +    S   +  L    +  GI+     
Sbjct: 463 PKCDNHAIRETDTFDTFFESSWYFTRYCNNNAVEMTDSKACNYWLPVDKYIGGIEHA--- 519

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
             +M++        L    +  +        +   + +        +   +PA ++    
Sbjct: 520 --VMHLLYARFFTKLMNEHHYVSIREPFKGLFTQGMVLHATYKDENNNWLYPAEVVKNGN 577

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               K  +   +  + EK+SKS  N+ID   + E+   DA+R F++ +    KD  +   
Sbjct: 578 EFFHKETNTRVVQGRIEKMSKSKKNIIDLETIQEQYSADAIRLFVLSDSPPEKDLQWSAS 637

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++    +   + + N+    +S +  D +          E +  +  +    ++ + ++
Sbjct: 638 GIEG--CSRFIHKLDNMFE-VISSLKDDMN---------NEINTELNRLIHFTIKHVADD 685

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           ++   ++RA+A++ +L + +  Y +  K       +     T+ Y        L  LL  
Sbjct: 686 IKTFSLNRAIARMRTLTNAI--YCEISK-------DKIDVRTIKY----GFNVLIQLLNP 732

Query: 465 FVPKLANKIFDILF 478
           F+P +  +I+  L 
Sbjct: 733 FIPHITEEIWQKLG 746


>gi|115522418|ref|YP_779329.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|123126891|sp|Q07UN5|SYL_RHOP5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115516365|gb|ABJ04349.1| leucyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 888

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 6/203 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + H+GH     + DV+AR  R  G +VL   G D  G     AA 
Sbjct: 33  RPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARTMRARGFNVLHPMGWDAFGLPAENAAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  K +   N    +     + +S D      T +  ++   + ++      G   +
Sbjct: 93  ERKVAPKAWTYDNIAAMKKQLQTMGLSLDWAREFATCDPSYYKHQQKMFLDFLKAGLAER 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   + F+++ Y   LL   +
Sbjct: 153 EKRKINWDPVDMTVLANEQVIDG----RGWRSGAVVEQREMNQWVFKITRYSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
               +   +            G+
Sbjct: 209 RLDRWPDKVRLMQRNWIGRSEGM 231



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 22/207 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP ++I   G D  R+F++ +    +D  + ++G+K    +     +  
Sbjct: 643 EKMSKSKRNTVDPDDIIGTYGADTARWFMLSDSPPDRDVIWSEEGVKGA--SRFVQRLWR 700

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           + + +  +           P  F     ++       L ++   ++    + +LA +   
Sbjct: 701 IANDAAEIAKL---APADRPAEFGPDAIAVRKAAHGALHKVLNGIERLAFNVSLAHIREF 757

Query: 421 VSEVDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + +           L K +   PD A  +     E    L  L+   +P LA + +++L
Sbjct: 758 ANAL--------ADSLGKADKPTPDLAFAIR----EAAIILVQLVAPMMPHLAEECWEVL 805

Query: 478 FVADENRCFQSLDQRLKPGFMLHKTFD 504
             A      ++    ++P  ++  T  
Sbjct: 806 GQAG--LVSEAGWPAVEPALLVEDTIT 830


>gi|169829674|ref|YP_001699832.1| leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688206|sp|B1HXY7|SYL_LYSSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168994162|gb|ACA41702.1| Leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 805

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 16/243 (6%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K +      YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFFALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++  KG 
Sbjct: 88  YALDTGNDPAEFTAKNIATFKRQIQELGFSYDWDREINTTDPAYYKWTQWIFIQLYKKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY D+L+ 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLID 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             E             E I  ++      S   +   +GI   D+   +     D L   
Sbjct: 204 DLE--------EVDWPESIKDMQRNWIGRSEGAE-VTFGIDGTDENFTVFTTRPDTLFGA 254

Query: 239 LTT 241
              
Sbjct: 255 TYC 257



 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 68/413 (16%), Positives = 144/413 (34%), Gaps = 63/413 (15%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++           + + GDI K  ++G     +  + N     +G        + 
Sbjct: 341 HDERDYEFASAFSLDIVPVLEGGDISKEAFTGDGQHINSDFLNGLNKVEGIAKAIEWLEE 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             V           + F    Y  + +         I P+      +   K+     S +
Sbjct: 401 KGVGEKKISYRLRDWLFSRQRYWGEPIPMIHWEDGTITPVPEEELPLMLPKTDNIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKF 255
            ++    I    +                M  W         Y+  T      D    K 
Sbjct: 461 GESPLANIAEWVNVVDPATGKKGRRETNTMPQWAGSSWYFLRYIDPTNTEAIADPELLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG-EKISK 305
           W P D+++ G +    H +Y   +         +    P  K +F+ G IL +G EK+SK
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQK-LFNQGMILGEGNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P E+IE  G D LR + +          +  +GL         +G    + R 
Sbjct: 580 SKGNVVNPDEIIESHGSDTLRLYEMFMGPLEASVAWSTNGL---------DGARRFLDRI 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +++ + DG I      ++ D+++     + ++++ E+ +    + A++Q++  +++  
Sbjct: 631 WRLLVNEEDGTISAKIQVSD-DKTLEKSYHQTVKKVTEDYEGIRFNTAISQMMVFINDCY 689

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +                 A  +     E       +L    P +A +++++L 
Sbjct: 690 K-----------------AEVIPTAYAEGF---VKMLAPIAPHIAEELWNLLG 722


>gi|297849874|ref|XP_002892818.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338660|gb|EFH69077.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1108

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 67/311 (21%), Positives = 110/311 (35%), Gaps = 48/311 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            ++  DP  ++  W  A    L+  G+ D  +  KA F+P  +   G DIL F    +  
Sbjct: 611 FELTRDPD-VLDTWFSAGLFPLSVLGWPDVTEDFKA-FYPTSVLETGHDILFFWVARMVM 668

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               L   +P  K  F        G K+SKSLGNVIDP+EVI  V ++ L   L      
Sbjct: 669 MGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLD 728

Query: 336 GKDGFYDKDGLKK--------------------------RVNADL-----ANGIGNLVSR 364
            K+    K+G  K                          ++N D+          N +  
Sbjct: 729 PKEVVVAKEGQVKDFPNGIPECGADALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWN 788

Query: 365 SVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +V   +         P   +        + ILSV ++ + +  E++       A   V +
Sbjct: 789 AVRFAMMKLGDDYTPPQTLSPETMPFSCQWILSVLNKAVSKTVESLDAFEFSDAATTVYA 848

Query: 420 LVS--EVDRYFDAQKPWELKKTNP----DRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                  D Y +A KP      NP    +RA     + +  +     LL   +P +  ++
Sbjct: 849 WWQYQFCDVYIEAIKP-YFAGDNPTFASERAHAQHALWI-SLETGLRLLHPLMPFVTEEL 906

Query: 474 FDILFVADENR 484
           +  L    +  
Sbjct: 907 WQRLPSPKDTE 917



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I           HIGHA    I D + R+ R+ G + L+  G D  G      
Sbjct: 165 SSKKPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWKRMSGYNALWVPGVDHAGIATQVV 224

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + +Q           L  S D      T +++ 
Sbjct: 225 VEKKLMRERGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRSLGASLDWSRECFTMDEQR 284

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +D+EV  
Sbjct: 285 SKAVTEAFVRLYKEGLIYRDIRLVNWDCVLRTAISDEEVEY 325


>gi|291485466|dbj|BAI86541.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 804

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 16/238 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            E             E I  ++      S       + I   DD   +     D L  
Sbjct: 205 LE--------ELDWPESIKDMQRNWIGRSEGAH-VHFAIDGHDDSFTVFTTRPDTLFG 253



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 42/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+            K + W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRYIDPHNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   + ++D   +         + E++  V 
Sbjct: 609 LDASIAWSESGL---------DGARRFLDRVWRLFIEDSGEL--NGKIVEGAGETLERVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + ++ ++ +    +  ++Q++  ++E  +                       +  E 
Sbjct: 658 HETVMKVTDHYEGLRFNTGISQLMVFINEAYK--------------------ATELPKEY 697

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     LL    P LA ++++ L 
Sbjct: 698 MEGFVKLLSPVAPHLAEELWEKLG 721


>gi|317182768|dbj|BAJ60552.1| leucyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 806

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGVHPKTWTYKNIETMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 110/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLHYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ ++                  A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALN------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|42528163|ref|NP_973261.1| isoleucyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81411431|sp|Q73JB2|SYI_TREDE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|41819208|gb|AAS13180.1| isoleucyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 1100

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 74/475 (15%), Positives = 146/475 (30%), Gaps = 46/475 (9%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR---DMADVLDI--SYDDFIRTTE 99
           V      D   +   + +   G+  K    Q     +    +     I  SY    R + 
Sbjct: 372 VPTVCPVDAECKFTHEVSDYQGLFVKDADKQIMERLKTEGKLFKKAQILHSYPHCWRCSS 431

Query: 100 KRHHDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
              +      +  ++   D               ++   +    E  +           N
Sbjct: 432 PLIYRAVASWFVSVTKIKDKLLNANSKINWQPDHIKTGRFGKWLEGARDWAISRNRYWGN 491

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P+   +                          L            K  +  +S+  K   
Sbjct: 492 PIPIWKCPDCG-----------ETICVGSREELKELSGVFPEDMHKHFVDKISIPCKKCG 540

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
             +K   +   ++  W ++ +       Y         K +PAD    G D     F+ +
Sbjct: 541 GTMKRVSE---VLDCWFESGSMPYAQQHYPFENKEHFEKNFPADFISEGLDQTRGWFYTL 597

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A  L         + +   +   G+K+SKSL N  DP EVI++ G DALR FL+   
Sbjct: 598 TILAAALFDEPAFKNCIVNGLVLAEDGKKMSKSLRNYTDPNEVIKQFGADALRLFLMNSN 657

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--------- 383
                D  Y  +G++  +   L   I    S S  +   + DG+ P   A          
Sbjct: 658 VVKADDLKYSDEGVRDVLKGIL---IPFWNSYSFYITYANIDGVKPPHNAKVDGKDEGVE 714

Query: 384 -------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                     D  ILSV  +++ ++ E +    + +A+  ++  +  ++ ++  +     
Sbjct: 715 EFLAKLNNPLDLWILSVTEKLVADVTEALDKYDLSQAIPPMVEYIDLLNNWYIRRSRRRF 774

Query: 437 KKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
            K+  D   S         +++ +++    VP +   I+  L    +       D
Sbjct: 775 WKSENDGDKSQAYETLYRALKKFSLVAAPVVPFITESIWQNLRTESDALSIHLAD 829



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 23/163 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+         +    PH GH     I D++ R+  + G  V    G D HG  +    
Sbjct: 37  GRDNYIFFDGPPFATGLPHFGHFVPGTIKDIIPRYKTMKGFRVERRFGWDCHGLPVENLI 96

Query: 63  QNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           +                         +   +V +  +    +   +D   D   +T E  
Sbjct: 97  EKELGLNSKTDIEKYGIDKFNEACRASVLRYVKEWKQTITRLGRWVDFENDY--KTMEPA 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++   + K + +KG +Y+G Y   Y  R     ++ E+  G
Sbjct: 155 FMESIWWVMKSLWEKGLLYEGYYILPYCPRCSTVLSNHELNLG 197


>gi|297380718|gb|ADI35605.1| leucyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 806

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHAAWELSERLF 728


>gi|126651278|ref|ZP_01723485.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591807|gb|EAZ85890.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 720

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 91/243 (37%), Gaps = 16/243 (6%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K +      YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFFALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++ +KG 
Sbjct: 88  YALDTGNDPAEFTAKNIATFKRQIQELGFSYDWDREINTTDPEYYKWTQWIFIQLYNKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY D+L+ 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLID 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             E             E I  ++      S   +   +GI   D+   +     D L   
Sbjct: 204 DLE--------EVDWPESIKDMQRNWIGRSEGAE-VTFGIDGTDENFTVFTTRPDTLFGA 254

Query: 239 LTT 241
              
Sbjct: 255 TYC 257



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 21/204 (10%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+  T      D    K W P D+++ G +    H +Y   +         +   
Sbjct: 498 WYFLRYIDPTNTEAIADPELLKRWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTK 557

Query: 284 LPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K +F+ G IL +G EK+SKS GNV++P E+IE  G D LR + +          + 
Sbjct: 558 EPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDEIIESHGADTLRLYEMFMGPLEASVAWS 616

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +GL         +G    + R   +++ + DG I      +  D ++     + ++++ 
Sbjct: 617 TNGL---------DGARRFLDRIWRLLVNEEDGTISAKIQVSN-DATLEKSYHQTVKKVT 666

Query: 403 ENMQNQLIHRALAQVISLVSEVDR 426
           E+ +    + A++Q++  +++  +
Sbjct: 667 EDYEGIRFNTAISQMMVFINDCYK 690


>gi|298250513|ref|ZP_06974317.1| isoleucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297548517|gb|EFH82384.1| isoleucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 1069

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 146/414 (35%), Gaps = 23/414 (5%)

Query: 100 KRHHDTCRILWKKISDKGDIYKG-CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +R   +    W+  +      K   Y      RDE   N++++    +        N ++
Sbjct: 397 ERVRHSYPFCWRCHTPLLYYAKPSWYVRTTKFRDEMLSNNEQINWVPEHIKTGRFGNWLE 456

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--- 215
               +    R   +   L  +     E    +    ++       LK+L L R   D   
Sbjct: 457 -NNVDWALSRERYWGTPLPIWICDKCEKTDVVGSVADLSQKAGRDLKELDLHRPYVDEIT 515

Query: 216 WGIKI---PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           WG +          +   W D+ +  +    Y    +   A+   AD      D     F
Sbjct: 516 WGCECGGSYHRVPDVADCWFDSGSMPVAQWHYPFENEEIFAQAGQADYISEAIDQTRGWF 575

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           + ++  + LL         +     +  KGEK+SKS GN ++P E++E  G D+ R+F+ 
Sbjct: 576 YTLHAISTLLFDRPAYKNVICLGHILDAKGEKMSKSRGNAVNPWELLESYGADSTRWFMC 635

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG------AFT 384
                     +  + L   +       + N  +  V+    D     P  G         
Sbjct: 636 ASAPPYNSRNFSFE-LVNEMQRQFLLTLWNTYAFFVTYANID-GWQAPAEGDPFAGVELQ 693

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNP 441
             D  IL+  + ++ +    + N  IH    Q++S + ++ + Y   + ++ W+  +++ 
Sbjct: 694 LIDRWILARLNALISDATGMLDNYDIHGPTRQMVSFIEDLSNWYVRRNRRRFWK-AESDQ 752

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           D+           +  LA L+  F P ++  ++  L  +  +   QS+     P
Sbjct: 753 DK-HAAYLTLYTCLTTLAKLMAPFTPYVSESLYQNLVASQNSSAPQSVHMAEWP 805



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 20/163 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDG-LDVLFTTGTDEHGQKIAKAA 62
           ++           N +P + H       DV+ R+ R+ G   +    G D HG  +    
Sbjct: 38  KQPFVFFEGPPTANGRPGVHHIESRTSKDVVIRYRRMRGQYILGARGGWDTHGLPVELEV 97

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       K  V    + +  + + +   I   D   T    + 
Sbjct: 98  EKQLGFSGKPDIEKYGIAEFNKACKESVWNYVQEWERLTNRIAYWIDLKDPYITYTNEYI 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   + +   D+G +++      +  R     +D EV +G +
Sbjct: 158 ESLWWILRTFWDRGLLFRDYKVTMHCPRCGTSLSDHEVSQGFE 200


>gi|315080792|gb|EFT52768.1| leucyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 826

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 13/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+    AYP+   H+GHA    I DVLAR+ RL GLDVL   G D  G     AA
Sbjct: 37  SRERRYVLDMFAYPSGDLHMGHAEAFAIGDVLARYWRLRGLDVLHPVGWDSFGLPAENAA 96

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGDIY 120
              G     +  +N            +S+D  +R  T+++ ++   + L+ +  +KG  Y
Sbjct: 97  IKHGTHPAEWTYRNIDTQAASFKRYAVSFDWSMRLHTSDEEYYRWTQWLFNRFFEKGLAY 156

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   +   ++FR++ Y  +LL   
Sbjct: 157 RKDSWANWCPNDQTVLANEQVKDG----CCERCGAVVTKRQLNQWYFRITDYAQRLL--- 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               +      +  E +  ++      S      D+ I    +P  +     D L
Sbjct: 210 ---DDMDQIEGKWPERVLSMQRNWIGRSEGAY-VDFTIDGRKEPVRVFTTRPDTL 260



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 42/301 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHV 262
             S      G     D    M  ++D  + Y           G        ++ P   ++
Sbjct: 487 WRSVACPSCGGAAQRDTD-TMDTFVD-SSWYFMRYCCPHYDKGPFDVEAVRRWMPVAQYI 544

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P  +++ + G ++++G  +SKSLGN +D  
Sbjct: 545 GGVEHATMHLLYSRFFTKVLHDLGMVDFTEPF-QRLMNQGQVINEGRAMSKSLGNGVDLG 603

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I+E GVDA+R  ++      +D   D   +              + S   S       
Sbjct: 604 KQIDEFGVDAVRTTVIFAGPPDEDI--DWADVSPASTLKFLQRAWRVASEVTS------- 654

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                    T+ D ++  V  R + +I E ++    +  +A+++ LV+   +  D+    
Sbjct: 655 ---DPDADLTQGDSTLRRVTHRSIADITELLEGGRYNVVVARIMELVNATRKAIDS---- 707

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                             E +   A  L    P LA +++++L +     N  + + D++
Sbjct: 708 --------GCGPADPAVREAVTFTAQALSLVAPYLAEEMWEMLGLEPSVANSHWPTADEK 759

Query: 493 L 493
           L
Sbjct: 760 L 760


>gi|16080084|ref|NP_390910.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310971|ref|ZP_03592818.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315298|ref|ZP_03597103.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320215|ref|ZP_03601509.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324497|ref|ZP_03605791.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|3123286|sp|P36430|SYL_BACSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2293181|gb|AAC00259.1| leucine tRNA synthetase [Bacillus subtilis]
 gi|2635516|emb|CAB15010.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 804

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 16/238 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            E             E I  ++      S       + I   DD   +     D L  
Sbjct: 205 LE--------ELDWPESIKDMQRNWIGRSEGAH-VHFAIDGHDDSFTVFTTRPDTLFG 253



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 42/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+            K + W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRYIDPHNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   + ++D   +         + E++  V 
Sbjct: 609 LDASIAWSESGL---------DGARRFLDRVWRLFIEDSGEL--NGKIVEGAGETLERVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + ++ ++ +    +  ++Q++  ++E  +                       +  E 
Sbjct: 658 HETVMKVTDHYEGLRFNTGISQLMVFINEAYK--------------------ATELPKEY 697

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     LL    P LA ++++ L 
Sbjct: 698 MEGFVKLLSPVAPHLAEELWEKLG 721


>gi|46125501|ref|XP_387304.1| hypothetical protein FG07128.1 [Gibberella zeae PH-1]
          Length = 969

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 5/192 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++  Y+     YP+   H+GH     IADV+AR+  L G  V+   G D  G     AA
Sbjct: 90  KKDNYYVLPMFPYPSGTLHLGHLRVYSIADVVARYRSLKGDKVMLPMGWDAFGLPAENAA 149

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V  + +   N    ++  ++++ S+D    + T +   +   + L+  + ++G  Y
Sbjct: 150 IERNVAPEKWTTSNMAKMKEQLELMNGSWDWNRELSTCDTSFYKHTQKLFLMLHERGLAY 209

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V          A+   V+    + +FFR+S +++ LL   
Sbjct: 210 QAEAEVNWDPVDKTVLANEQVDSNGCSWRSGAK---VEKRNLKQWFFRISEFREALLEEL 266

Query: 181 ESHPEFILPIER 192
           E+  +     ER
Sbjct: 267 EALAKENAWPER 278



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 35/236 (14%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK V S        EK+SKS  N +DP E I + G DA R  ++ +   G    +D+  +
Sbjct: 680 PKVVASRKSANIAYEKMSKSKYNGVDPSEFISKYGADATRAHILFQAPVGDILNWDEGKI 739

Query: 347 --KKRVNADLANGIGNL----------VSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
               R    L + I  +              ++   +          A  +++ +I    
Sbjct: 740 TGVTRWLQRLYDQITAIAAEPYTKKVSARDYLAAKHESLGSASAKELAQWDTEAAIWRDV 799

Query: 395 SRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            R +  +  +      ++  ++ ++                 L  T  D       V  E
Sbjct: 800 QRTIASVTASYDEVYSLNTVVSDLM----------------ILTNTLADNIKASPVVKRE 843

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVAD----ENRCFQSLDQRLKPGFMLHKTFDP 505
             + L  ++    P  A + + +L  +     E+  F  +D  L    ++     P
Sbjct: 844 AAQTLISMMAPITPAFAEECWALLRPSSPSIFESTNFPKVDTSLTE--LVRPRVQP 897


>gi|330798120|ref|XP_003287103.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum]
 gi|325082881|gb|EGC36349.1| hypothetical protein DICPUDRAFT_94325 [Dictyostelium purpureum]
          Length = 911

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 5/205 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+EK Y  +   YP+   H+GH     I+D +AR  R+ G DV+   G D  G     A
Sbjct: 48  SEKEKFYSLSQFPYPSGNLHMGHVRVYSISDCIARLKRMQGYDVIHPMGWDAFGLPAENA 107

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  V+   + + N    +D    LD    +D  + T  K ++   + ++ K+   G  
Sbjct: 108 AIDKKVSPSYWTNLNINTMKDQLKRLDLHFDWDRELSTCNKDYYRWTQDIFLKLFKSGLA 167

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V            +  V+  E + +FF+++A  D+L   
Sbjct: 168 YRKSATVNWDPIDQTVLANEQVDAQ---GRSWRSNAIVEKKEMKQWFFKITAMADRLHDD 224

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            ++ P +   I+   +       G 
Sbjct: 225 LDTLPGWSDEIKNMQKEWIGRSHGH 249



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 57/247 (23%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAF----- 278
           M  ++D+   YL      ++    K     K+ P D++V G +    H +Y   F     
Sbjct: 524 MDTFVDSSWYYLRFLDNKNDNAMFKPEIVNKYMPVDVYVGGIEHAILHLLYSRFFTKFLK 583

Query: 279 ---------------------------------LLSANLPLPK------KVFSHGFILHK 299
                                            +   +L   K         +   +   
Sbjct: 584 DQDLIQHSEPFKVLLAQGLVKSPTYRDEVTNKPIHPNDLEWVKGSKQPINKLTGNKVNIT 643

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N IDP E+I++ G D L+ +++ +        +D DG++          + 
Sbjct: 644 IEKMSKSKLNGIDPNEMIDKYGSDTLKSYILFKAPPQNSLDWDSDGIEGC-----RKWLK 698

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILS----VCSRVLQEIRENMQNQLIHRALA 415
            + S +   + +       T   FT+  +  L          +  + E++     +  ++
Sbjct: 699 RVESLTTQFVEEFSLESPITQDKFTDKQKKELKEMEFEAHSTIDRVTESIDKHSFNTGIS 758

Query: 416 QVISLVS 422
            ++ L +
Sbjct: 759 ALMQLSN 765


>gi|281206004|gb|EFA80193.1| leucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 912

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 5/200 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y  +   YP+   H+GH     ++D +AR  R+ G  V+   G D  G     AA + 
Sbjct: 50  KYYSLSQFPYPSGNLHMGHVRVYTMSDCVARLKRMQGYQVVHPMGWDAFGLPAENAAIDK 109

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            V+  ++ +QN +        LD+ +D    + T    ++   + ++ ++  KG  Y+  
Sbjct: 110 QVSPALWTNQNIQQMTTQLKRLDLQFDWERELSTCSPDYYRWTQDIFLRLYSKGLAYRKH 169

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
               +   D+    +++V            +  V+  E + ++F+++ Y D+L    +  
Sbjct: 170 SPVNWDPVDQTVLANEQVDSQ---GRSWRSNALVERREMKQWYFKITEYADRLADDLDKL 226

Query: 184 PEFILPIERRNEVISFVKSG 203
             +   ++           G
Sbjct: 227 TGWPEDVKTMQREWIGRSVG 246



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 106/305 (34%), Gaps = 80/305 (26%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAF----- 278
           M  ++D+   YL      +  +        K  P D++V G +    H +Y   F     
Sbjct: 533 MDTFVDSSWYYLRFLDSKNQKEMFNKDIVNKLMPVDVYVGGIEHAILHLLYSRFFTKFLK 592

Query: 279 ---LLSANLPL------------------------PKKV----------FSHGFILHKGE 301
              ++  + P                         PK V           +   +    E
Sbjct: 593 DQGIIDHDEPFKVLLTQGLVKSPTYRDSTTGKPLYPKDVDFTTPKPINKLTGNLVNITLE 652

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N +DP E+I++ G D L+ +++ +        +D DG++         G    
Sbjct: 653 KMSKSKLNGVDPNEMIDKYGSDTLKLYILFKAPPENSLEWDTDGIE---------GCRKW 703

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDES------ILSVCSRVLQEIRENMQNQLIHRALA 415
           + R  S++                SD+       +       ++++ E++     + A++
Sbjct: 704 LKRVESLVSGYV-AERNNGQISKVSDKWNTQLNSLRYDTHSSIEKVTESIDRYTFNTAIS 762

Query: 416 QVISLVSEVDRY---FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            +++L +++ +Y    D +   E                +E +  L +LL  F P  + +
Sbjct: 763 FLMTLSNQIGKYQNNVDDKSSREY---------------LEALETLVVLLAPFAPNASQQ 807

Query: 473 IFDIL 477
           ++  L
Sbjct: 808 LWTEL 812


>gi|94987090|ref|YP_595023.1| valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731339|emb|CAJ54702.1| Valyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 882

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 121/329 (36%), Gaps = 22/329 (6%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFI-----LPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            E       ++     ++ ++  ++          R         + L        +   
Sbjct: 378 PEQTKLFPKSWLKTYYNWLDNIRDWCISRQIWWGHRIPAWTCTSCNKLFVEETEPSSCPC 437

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
           G         ++  W  +     +T G+ +      A F+P  + V G DIL F    W 
Sbjct: 438 GSHNLIQETDVLDTWFSSAIWPFSTLGWPNKTP-ELAMFYPTSILVTGFDILFF----WV 492

Query: 277 AFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           A ++   L   K V      +H      +G K+SKSLGN IDPI++IE+ G DALR+ L 
Sbjct: 493 ARMMMFGLHFMKDVPFRHVYIHALIRDSEGRKMSKSLGNSIDPIQMIEKYGTDALRFTLT 552

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              A G+D    ++ ++        N + N    ++  +  D   ++          +  
Sbjct: 553 AFAAMGRDIRLSEERIEG--YRHFMNKLWNASRFALMNLPTDSVQLVSIEEITALHHKWF 610

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVL 448
           L     V  ++ ++++N   +     +         D Y +  K     K      +   
Sbjct: 611 LHRLEEVKIDVNDSIKNYRFNDMAQTLYKFFWNEFCDWYLEIIK--IDFKEEGLHKTQAQ 668

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           YV    +++L ILL   +P + ++I+  L
Sbjct: 669 YVLWLGLKELLILLHPIIPFITSEIWKAL 697



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   I           HIGHA  + + D+L R  R  G  VL+  GTD  G      
Sbjct: 35  EKGEPFCIVIPPPNVTGILHIGHALNITLQDILCRHARQQGKKVLWIPGTDHAGIATQHV 94

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                        + ++   +  +    +  S D      T +    
Sbjct: 95  VERMLAKENVSREQLGREAFIQKVWQWREKYGTHILEQLRRIGASVDWTRERFTMDDGLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              R ++ ++  +G IYKG Y   +        +DDEV    +
Sbjct: 155 QAVRKVFVELYKQGYIYKGKYIVNWCTYCHTALSDDEVEHRTE 197


>gi|321312568|ref|YP_004204855.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018842|gb|ADV93828.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 804

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 16/238 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            E             E I  ++      S       + I   DD   +     D L  
Sbjct: 205 LE--------ELDWPESIKDMQRNWIGRSEGAH-VHFAIDGHDDSFTVFTTRPDTLFG 253



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 92/264 (34%), Gaps = 42/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+            K + W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRYIDPHNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVSSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   + +++   +         + E++  V 
Sbjct: 609 LDASIAWSESGL---------DGARRFLDRVWRLFVEENGEL--NGKIVEGAGETLERVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + ++ ++ +    +  ++Q++  ++E  +                       +  E 
Sbjct: 658 HETVMKVTDHYEGLRFNTGISQLMVFINEAYK--------------------ATELPKEY 697

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     LL    P LA ++++ L 
Sbjct: 698 MEGFVKLLSPVAPHLAEELWEKLG 721


>gi|296272197|ref|YP_003654828.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096372|gb|ADG92322.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 821

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 82/206 (39%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++K YI +   YP+ + H+GH     + D  ARF R    +VL   G D  G     A
Sbjct: 28  TKKDKKYILSMFPYPSGRIHMGHVRNYCLGDAFARFFRKSNFNVLHPIGWDSFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +  +N    R     L +S+  +    T+++ +    +    K+ ++G +
Sbjct: 88  AIKHKLHPKKWTYENIDYMRKELHGLGLSFSKNREFATSDELYTRWEQEFIIKMFEEGLL 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     ++++ +G           PV+  E  GY+  ++ +  +LL  
Sbjct: 148 YKKSTTVNWCPHDLTVLANEQLEEG----CCWRCGTPVEQKEMPGYYVAITKFAQELLDD 203

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            +     +   +    E       GL
Sbjct: 204 LKDLEGSWPSQVLTMQENWIGRSEGL 229



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 93/263 (35%), Gaps = 33/263 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------ 278
           ++   W                     + +W   D ++ G +    H +Y   F      
Sbjct: 502 FVQSSWYFLRYATNNKKWNSVGISKEDSDYWMDVDQYIGGIEHAILHLLYSRFFTKALNK 561

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
               ++  P  KK+ + G +L  G K+SKS GNV+DP +++E+ G D  R F++      
Sbjct: 562 LGYTNSKEPF-KKLLTQGMVLKDGAKMSKSKGNVVDPDKIVEKYGADTARLFMLFAAPPT 620

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           K+  ++   +               V  +  + ++D + +     + ++ ++        
Sbjct: 621 KELDWNDSAVDGAF--KFIKRFTAKVEMAEGISIEDINSI--DHDSLSKEEKETRKKVYE 676

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            LQ+  E        +  +A  +  ++ ++                    TV      ++
Sbjct: 677 ALQKSNEVFSKTYAFNTLIAASMEALNALN---------------TQDNKTVWAEGYYIL 721

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             +   L+  +P L  ++ + LF
Sbjct: 722 TNI---LEPIIPHLCWELSNELF 741


>gi|188528338|ref|YP_001911025.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144578|gb|ACD48995.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 806

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   ++
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLKA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|109946907|ref|YP_664135.1| leucyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066333|sp|Q17YZ0|SYL_HELAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109714128|emb|CAJ99136.1| leuS [Helicobacter acinonychis str. Sheeba]
          Length = 806

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D L R++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N  N +   + L  S+  +    T++  + +  +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPNYTEFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V +G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIEG----RCWRCDTEVVQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LKNHWPSQVLLMQKNWIGKSSGLQ 228



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 108/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +       K           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLPSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKNCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFTQCPKCHKDALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         + 
Sbjct: 493 WYFLRYTTPKNQRENQAFDKNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYID 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGVKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          + +  +       K             E+++         L++ 
Sbjct: 612 NDSALEGAHR--FIKRLYDKANAINPTTYK----PEFKEANLNEAEKLARKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E   N       +  +A  +  ++ ++              N +R      +  E    
Sbjct: 666 HEIFNNPESTYAFNTLIASCMEALNALN------------TQNNER------ILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQVLEPMIPHTAWELSERLF 728


>gi|78779295|ref|YP_397407.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554233|sp|Q31AX4|SYL_PROM9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78712794|gb|ABB49971.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 856

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 87/224 (38%), Gaps = 5/224 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     A
Sbjct: 41  ENSDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G++  V+  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +
Sbjct: 101 AIERGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLV 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V          A    V+    + +F R++ Y D+LL  
Sbjct: 161 YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGA---LVEKKLLKQWFLRITNYADELLKD 217

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            E    +   ++   +       G           +  I +   
Sbjct: 218 LEKLDNWPERVKIMQDNWIGKSIGTNINFNINTNPEKKITVFTT 261



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 105/323 (32%), Gaps = 68/323 (21%)

Query: 203 GLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
           G     ++      GI  K   D              Y ++       +  +   W P D
Sbjct: 479 GDNYNWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSRCSTKPFEKIEINNWLPVD 538

Query: 260 LHVIGKDILRFHAIYWPAFL--------LSANLPL------------------------- 286
            +V G +    H +Y   F            + P                          
Sbjct: 539 QYVGGVEHAILHLLYARFFTKALRDNELFEIDEPFKKLLTQGMVQSAAYKNNKTGKYISP 598

Query: 287 --------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   P     +  +    EK+SKS  N IDP  VI++ G D  R F++ +    KD
Sbjct: 599 SDINDLSNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKD 658

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +    ++         G    +SR   + +     +     ++   +++++   +  +
Sbjct: 659 LEWGDSDVE---------GQFRFLSRIWKLYISCSKDINSKSKSYPNKEKTLIKSMNIAI 709

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +EI  ++ N   + A+++++   + +               + +       + ++ ++  
Sbjct: 710 KEITNDISNNQFNTAISELMKFYNSL---------------SNNINDVNNNLKIDALKTF 754

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
            ILL  F P ++ +I+ ++   +
Sbjct: 755 CILLAPFAPHISEEIWLLIGFKN 777


>gi|313678270|ref|YP_004056010.1| valine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950415|gb|ADR25010.1| valine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 829

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 147/360 (40%), Gaps = 45/360 (12%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E    ++  Y    + P++ +    +F ++     K++++ +S        +R  + ++
Sbjct: 333 KEEKTISNVGYSERSNTPIETLVMPQWFVKMENLAKKVINHLKSADHVKFYPKRFIKTVN 392

Query: 199 FVKSGLKDLSLSRKTFDWGIKI-------------------PDDPQYIMYVWIDALTNYL 239
              + + D ++SR+   WG +I                         ++  W  +     
Sbjct: 393 NWLANMHDWTISRQ-LWWGHRIPAWYSGNEVKVQVECPGEGWVQDSDVLDTWFSSGIAPF 451

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
           +  G+  + +  K +++P +L V G DI+ F    +Y+ +   +   P    +       
Sbjct: 452 SFLGWPASDELLK-RYYPTNLLVTGYDIIFFWVVRMYFFSLEFTNKKPFETVLLHGLVRD 510

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSL N +DP++VIEE G D+LR+FLV   + G D  +    +  R    L N 
Sbjct: 511 ELNRKMSKSLNNGVDPVKVIEEYGSDSLRFFLVTSSSPGLDTRFSIKKI--RSAWGLCNK 568

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N+  R ++M+  D           + +D  I +    +  +I + M    +  A +++
Sbjct: 569 LWNIA-RYINMLDDD------NVSEPSAADIWINNKLKTLQNKISKAMNKYELTIAGSEL 621

Query: 418 ISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + +       Y +      L K  P++        +E +R+L I+   F+P + + ++ 
Sbjct: 622 SNFIFNDFSSWYIE------LLKIYPNKKQA-----LENLRKLLIIAHPFLPFVTDYLYQ 670



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 19/139 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           ++   +           HIGHA +  I D + R+ +L+G D  +  G D  G        
Sbjct: 34  KKPFSLLLPPPNVTGVLHIGHALDQYIQDTILRYKKLEGYDTFYIAGMDHAGIATQSKVE 93

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                           +        + +  +  FR+    L I   Y+    T +K  +D
Sbjct: 94  SVLLQTEGLSRHNLGREKFIEKVWKWKETYANKFREQWLTLGIGLDYERERFTLDKLSND 153

Query: 105 TCRILWKKISDKGDIYKGC 123
               ++ ++ +KG IY+  
Sbjct: 154 AVNKVFIELYNKGLIYRDT 172


>gi|221135841|ref|XP_002164854.1| PREDICTED: similar to methionyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 243

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 30/245 (12%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI 58
           M E   K  ++ A+ Y N   HIGH A   I AD+  R+ R  G DV F +GTDEHG  I
Sbjct: 1   MTETPQKYTVTAALIYANGPIHIGHLAGCYIPADIYVRYLRSKGADVAFISGTDEHGVPI 60

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
              A+  G T +  VD      +       IS+D + RT+ + HH   + ++  + DKG 
Sbjct: 61  TVKARKEGKTPQQVVDFYYEQIKQSFADFGISFDIYSRTSNQSHHKVSQEIFTTLYDKGY 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVY-----------KGADGQYYNAQHNPVQWMEE----- 162
             +     ++    + +  D  +             G   +   +  +P +         
Sbjct: 121 FDEETSEQYFDEVAQQFLADRYIVGECPVCGNPNAYGDQCEKCGSTLSPTELKNPRSTLS 180

Query: 163 ---------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
                    + ++  L   Q  +  Y  SH E+        +  S++K GL+  +++R  
Sbjct: 181 GSKPIMKSTKNWYLPLDRMQPDIKKYVNSHKEWK--TNVFGQCQSWLKDGLRPRAMTRD- 237

Query: 214 FDWGI 218
            DWGI
Sbjct: 238 LDWGI 242


>gi|213410098|ref|XP_002175819.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003866|gb|EEB09526.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 873

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 5/229 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK+YI +   YP+   H+GH     IAD+LARF+R+ G +V+   G D  G     AA
Sbjct: 55  TKEKMYILSMFPYPSGSLHMGHVRVYTIADLLARFYRMKGYEVIHPIGWDAFGLPAENAA 114

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +  +V+   N    +     +++ +D    I T    ++   + L+ K+      Y
Sbjct: 115 LERQIKPEVWTSSNIVKMKQQLLAMNVQFDWQRSITTCSPTYYRWTQWLFLKLFKHKLAY 174

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V               V+      +F R++ Y  +L    
Sbjct: 175 QKYATVNWDPVDQTVLANEQVNSE---GRSWRSGALVEKRTLNQWFLRITDYAHELNHDL 231

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           +    +   +            G + L          + +       +Y
Sbjct: 232 DLLSGWPDQVRTMQRNWIGESHGYEVLFQLDDENGTQLPVFTTRPETLY 280



 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 66/186 (35%), Gaps = 26/186 (13%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP+ V+   G D +R  ++      K   +D          + A GI 
Sbjct: 628 FEKMSKSKHNGVDPMGVLRTWGSDVVRAHILFSAPVDKVLNWDP---------NTAVGIK 678

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL----IHRALA 415
             + R V +  +            ++  ++ LS+ S +   +     N      ++  ++
Sbjct: 679 RWLLRVVQIAEQLQGSNTIEKVDVSQLSQTELSLLSELTSLVARAEDNYASRLGLNVLVS 738

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++   + + +           K +  R      V    +  L   +    P ++ + ++
Sbjct: 739 DLMKFTNLLTK---------CMKEDQVR----PEVAHYALEILVRCMAPMTPCVSMECWE 785

Query: 476 ILFVAD 481
           +L    
Sbjct: 786 LLRCPG 791


>gi|34557610|ref|NP_907425.1| leucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|48428520|sp|Q7M926|SYL_WOLSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34483327|emb|CAE10325.1| LEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 819

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D +AR  R    +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYCIGDAIARHFRKQNFNVLHPIGWDAFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                K +   N  N R+  D L +S+  +    T +  +    +  +  + ++G IY+ 
Sbjct: 91  HKSHPKKWTYDNISNMREELDSLGLSFSNEREFATCDPIYSKWEQKFFIDMWNRGLIYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V +G            V   E   Y+ +++ Y ++LL   ++
Sbjct: 151 KGFLNWCPNDQTVLANEQVIEG----RCWRCDTEVVQKEMFQYYVKITDYAEELLGSLDT 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
               +   +            GL
Sbjct: 207 LEGRWPSQVLTMQRNWIGRSEGL 229



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 104/343 (30%), Gaps = 51/343 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL----------KD 206
           V       +      Y    +         I+P +  N  I+  +  +            
Sbjct: 418 VINYRLRDWGISRQRYWGTPIPLIHCPSCGIVPEDFSNLPITLPEDVIIDGEGNPLEKHP 477

Query: 207 LSLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-ADLH 261
                +    G K   +      ++   W                 + +  ++W   D +
Sbjct: 478 AWKECRCPKCGGKATRETDTMDTFVESSWYFLRYTTPKEEWETHALNEAMQRYWMGVDEY 537

Query: 262 VIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   F            N P    + + G +L  G K+SKS GNV+DP
Sbjct: 538 IGGIEHAILHLLYARFFTKVLRDLGYTETNEPFT-HLLTQGMVLKDGAKMSKSKGNVVDP 596

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+IE  G D  R F++      ++  ++   ++       A      +      + K  
Sbjct: 597 DELIERFGADTARLFVLFAAPPTRELEWNDSAVEG------AYRFIKRLCDKTQFVQKVS 650

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQVISLVSEVDRYFDA 430
                     +++++         L + +E          +  +A  +  ++ +    D 
Sbjct: 651 SLPQIETATLSKTEKLARKKVHETLLKAQEVYSRKNAYAFNTLIASCMEALNALS---DQ 707

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           + P                +  E    L  +L+  +P +A ++
Sbjct: 708 ENP---------------AIFTEGYFILLSVLEPIIPHVAWEL 735


>gi|308174705|ref|YP_003921410.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607569|emb|CBI43940.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554634|gb|AEB25126.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328913042|gb|AEB64638.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 804

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 7/209 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKHNIDNFRRQIQSLGFSYDWDREINTTDPDYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLS 208
            E         + +   I   +      +
Sbjct: 205 LEDLDWPESIKDMQRNWIGRSEGANVHFA 233



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 57/278 (20%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            K+ P D+++ G +    H +Y   +         +    P  K       +    EK+S
Sbjct: 519 DKWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P E++   G D LR + +          + + GL         +G    + R
Sbjct: 579 KSRGNVVNPDEIVASHGADTLRLYEMFMGPLDASIAWSESGL---------DGARRFLDR 629

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              + +++   +  T      + E++  V    + ++ EN +    +  ++Q++  ++E 
Sbjct: 630 VWRLFIEENGEL--TGKVTEGAGETLERVYHETVMKVTENYEALRFNTGISQLMVFINEA 687

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF------ 478
            +                       +  E +     LL    P LA ++++ L       
Sbjct: 688 YK--------------------ANELPREYMEGFVKLLSPVAPHLAEELWEKLGHEGSIA 727

Query: 479 ------------VADENRCFQSLDQRLKPGFMLHKTFD 504
                       V DE      L+ ++K   M+    D
Sbjct: 728 YEAWPAYDESKLVDDEVEIVVQLNGKVKAKLMVPADAD 765


>gi|153209379|ref|ZP_01947374.1| valyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165919056|ref|ZP_02219142.1| valyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212218292|ref|YP_002305079.1| valyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|120575379|gb|EAX32003.1| valyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917251|gb|EDR35855.1| valyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212012554|gb|ACJ19934.1| valyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 920

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 138/395 (34%), Gaps = 86/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++ A     +   ES     +P       + ++   ++D  +SR+   W
Sbjct: 348 IEPLLTDQWFIKMEALAKPAMEAVESGELKFIPKNWEKTYLQWLS-NIQDWCISRQ-LWW 405

Query: 217 GI--KIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G    +  D +                             ++  W  A      T G+ +
Sbjct: 406 GHRLPVWYDEEKNSYVGRSREEILKKYHLSPDVKLQQETDVLDTWFSASLWPFATLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KG 300
             +  K  F+P  + V G DI+ F    W A ++   L L  K+  H   +H      +G
Sbjct: 466 KTESFKT-FYPTQVLVTGFDIIFF----WVARMVMMGLKLTHKIPFHSVYIHGLIRDSQG 520

Query: 301 EKISKSLGNVIDPIEVIEE-------------------------------------VGVD 323
            K+SKS GNVIDPI++I+                                       G D
Sbjct: 521 RKMSKSKGNVIDPIDIIDGISLDALIEKRTHALLQPKMAKTIEKMTRKEFPNGIASFGTD 580

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+      + G+D  +D   +      +  N I N  +R V+M  ++ D     P ++
Sbjct: 581 ALRFTFCALASRGRDINFDMGRIDG--YRNFCNKIWN-AARFVTMNTQEKDLNPEKPLSY 637

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT-N 440
           + +DE I +   + ++   E +           +         D Y +  K     +   
Sbjct: 638 SAADEWIRTRLQQTIKNAEEALSQYRFDLLAQTLYEFTWNEYCDWYVEFAKCILYDEQAK 697

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        +EV+  L  LL   +P +  +I+ 
Sbjct: 698 PAQLRGTRVALLEVLEILLRLLHPVMPFITEEIWQ 732



 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GH ++  + D L R+HR+ G   L+  GTD  G       +    
Sbjct: 34  CIMLPPPNVTGTLHMGHGFQQTLMDTLIRYHRMKGERTLWQGGTDHAGIATQMVVEQQLA 93

Query: 68  TT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      + F+ +                R +   +D S + F  + ++       
Sbjct: 94  QEDLTREDLGRQAFIKRVWEWRERSGGKITHQMRRLGVSIDWSRERF--SMDEGLSRATT 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  +G IY+G     +  +     +D EV       +      P+
Sbjct: 152 EAFIRLHHEGLIYRGKRLVNWDPKLNTAISDLEVVTEEVEGHLWHIRYPL 201


>gi|315585949|gb|ADU40330.1| leucine--tRNA ligase [Helicobacter pylori 35A]
          Length = 806

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D L R++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGVHPKTWTYENIEAMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 111/381 (29%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKNCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S+I            +  E+++         L+++
Sbjct: 612 NDNALEG------AHRFIKRLYDKASVINPTTSKPEFKEASLNEAEKLGRKKVYEALKKL 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|33240397|ref|NP_875339.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|48428531|sp|Q7VBZ5|SYL_PROMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33237924|gb|AAP99991.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 870

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 95/230 (41%), Gaps = 5/230 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++  Y  +   YP+   H+GH    +I DV+AR HR+ G  VL   G D  G     A
Sbjct: 43  KSQKTFYALSMFPYPSGTLHMGHVRNYVITDVIARLHRMKGDSVLHPMGWDAFGLPAENA 102

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   ++  +N  + R+  + L   I +D  + T ++ ++   + ++ ++ + G  
Sbjct: 103 AIERGIPADIWTYKNIEDMRNQLNRLGLSIDWDKEVTTCKEEYYKWTQYIFLELYEAGLA 162

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V               V+  + + +F +++ + D+LL  
Sbjct: 163 YQKSATVNWDPIDKTVLANEQVDAN---GRSWRSGALVEKKKLKQWFLKITDFADELLED 219

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
            E    +   ++   +      +G +     +   +  I +       ++
Sbjct: 220 IELLSGWPQNVKTMQQNWIGRSNGTEIDFYIKGKNNIFITVFTTRPDTLH 269



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 24/179 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  VI++ G D  R F++ +    KD  +D+  ++ +      N +  
Sbjct: 625 EKMSKSKYNGVDPASVIDKYGTDTARMFILFKAPPEKDLEWDESDVEGQYR--FLNRLWR 682

Query: 361 LVSRSVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENM-QNQLIHRALA 415
           +V  S+    KD +    T        ++ +  ++ V +  ++E+  ++  +   + A++
Sbjct: 683 IVIYSIET--KDINISNCTQEILLNDLSDKERKLIKVLNNTIKEVTNDLVNDFQFNTAIS 740

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +++ L + +    D                   Y+  E  ++L +LL  F P +A + +
Sbjct: 741 ELMILCNSIYENIDDCGD---------------YIVTETFKKLTLLLAPFAPHIAEEFW 784


>gi|308490640|ref|XP_003107512.1| CRE-VARS-2 protein [Caenorhabditis remanei]
 gi|308251880|gb|EFO95832.1| CRE-VARS-2 protein [Caenorhabditis remanei]
          Length = 1049

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 73/364 (20%), Positives = 127/364 (34%), Gaps = 53/364 (14%)

Query: 162 EEGYFFRLSAYQDKLLSYYE----SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
              +      +    +  Y        E  LP E         +   +  +   +  +  
Sbjct: 496 SRDWCISRQLWWGHRIPAYFVSFADGREQPLPEENYWVSARTEQEAREKAAKKFQVPEAE 555

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I +  D   ++  W  +        G+ DN       F+P+ +   G DIL F    + +
Sbjct: 556 ILLKWDED-VLDTWFSSGMWPFAVFGWPDNTK-DMDLFFPSAVLETGHDILFFWVARMVF 613

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------ 317
            A  L+  LP  + +         G K+SKSLGNVIDP++VI                  
Sbjct: 614 MAQELTGKLPFKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGVTLEGLQSQLLSGNLD 673

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E GVDALR+ L+   + G+D   + D L+ +      N I
Sbjct: 674 EKEIVVAKAGQARDYPDGIPECGVDALRFALLAYTSQGRDI--NLDVLRVQGYRFFCNKI 731

Query: 359 GNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
              V  S++   +  D            T +D+ ILS  ++ ++E  E ++     +A  
Sbjct: 732 WQAVRFSLNQFAEKPDQKPTFNIDLSKATPTDKWILSKLAKAVKETNETLKVYNFTQATT 791

Query: 416 QVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              +       D Y +A KP  L   N D     + V    +     L+   +P ++ ++
Sbjct: 792 VTYNFWLYDFCDVYIEAIKP-VLYGDNADLRQIAISVLHLCVDTGLRLISPLMPFISEEL 850

Query: 474 FDIL 477
           +  L
Sbjct: 851 WQRL 854



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 19/145 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA    + D + RF+R+ G   LF  G D  G       + 
Sbjct: 116 ESFVICIPPPNVTGTLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVVVEK 175

Query: 65  A---------------GVTTKVFVDQNSRN--FRDMADVLD--ISYDDFIRTTEKRHHDT 105
                               +V+  +N +     D    L   + +D  + T + +    
Sbjct: 176 RLKRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKMCRA 235

Query: 106 CRILWKKISDKGDIYKGCYSGWYSL 130
               + ++ + G IY+      +S 
Sbjct: 236 VTEAFIRMHESGTIYRSNRLVNWSC 260


>gi|315225672|ref|ZP_07867479.1| valine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944335|gb|EFS96377.1| valine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 878

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 124/379 (32%), Gaps = 28/379 (7%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +  G   +        L D+ +   D + + A       +   +   + E  +       
Sbjct: 338 NKVGTSERTKAVIEPRLSDQWFLKMDTLIQPAIKAVLEDESIKLYPKKFENTYRHWVENV 397

Query: 174 DKLLSYYESHPEFILPIERRNEVISFV-------KSGLKDLSLSRKTFDWGIKIPDDPQY 226
                  +      +P     E            ++ +     S         +  D   
Sbjct: 398 RDWNISRQLWWGQQIPAYYYGEGKDQFVVAETKAEALVLAKEKSGNAHLTEADLQQDED- 456

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            +  W  +    ++    + +  +     ++P +  V   DIL F    +    F     
Sbjct: 457 TLDTWFSSWLWPMSVFNGILEPNNPEIEYYYPTNDLVTAPDILFFWVTRMIVAGFEYKGE 516

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P     F+      +  K+SKSLGN  D +++I + G D +R  L+   A G D  +D+
Sbjct: 517 RPFNNVYFTGLVRDKQRRKMSKSLGNSPDALKLIADYGADGVRVGLLLSSAAGNDLLFDE 576

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              ++        G GN +  +  ++     D  +  P A   + +   +  + VL E+ 
Sbjct: 577 ALCQQG------KGFGNKLWNAFQLVKSWQVDSSVAQPAAAQLALQWFEAKFNAVLTEVE 630

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQL 458
           ++ +   I  AL  +  L        D    W L+   P+    +   T E        L
Sbjct: 631 DHFEKYRISDALMAIYKLAW------DDFCAWLLEMVKPEYGKPMDKATYEGVVIAFENL 684

Query: 459 AILLQAFVPKLANKIFDIL 477
             LL  F+P L  +I+  L
Sbjct: 685 LKLLHPFMPFLTEEIWQSL 703



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ER    I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  ERTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +   V    +  Q      +    L  S D      T ++    
Sbjct: 92  VAKLKEQGIKKSDLTREEFLVHAWEWTHQYGGVILEQLKKLGCSCDWERTKFTMDEELSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLYNKGQIYRGHRMVNWDPEAKTTLSDEEVIY 190


>gi|238020647|ref|ZP_04601073.1| hypothetical protein GCWU000324_00536 [Kingella oralis ATCC 51147]
 gi|237867627|gb|EEP68633.1| hypothetical protein GCWU000324_00536 [Kingella oralis ATCC 51147]
          Length = 942

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 127/384 (33%), Gaps = 77/384 (20%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    ++  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 385 EPESEYKGLSLADKAKRAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 442

Query: 220 IPDDPQYIMYV-------------------------WIDALTNYLTTTGYLDNPDGSKAK 254
              D     YV                         W  +     +T G+       KA 
Sbjct: 443 AWYDENGNCYVARSEEDAQKQAGSLKLTRDEDVLDTWFSSALVPFSTLGWPSETPELKAF 502

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 503 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 561

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 562 PVDLIDGIDLDKLLVKRTTGLRKPETAPAVKKTTEKLFPEGIPAMGADALRFTMASYASL 621

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSV 393
           G+   +D          +  N + N  +  V M  +  D       P A+T +D+ I+  
Sbjct: 622 GRSVNFDFKR--AEGYRNFCNKLWN-ATNFVLMNTEGQDCGQDETQPLAYTFADQWIIGK 678

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             +    + E  +      A   +   V     D Y +  K  +++   P    T     
Sbjct: 679 LQQTEAAVAEAFETYRFDLAAQTLYEFVWNEYCDWYIELAKV-QIQTGCPTTQRTTRRTL 737

Query: 452 VEVIRQLAILLQAFVPKLANKIFD 475
           V V+  +  LL   +P +  +++ 
Sbjct: 738 VRVLEAILRLLHPIMPFITEELWQ 761



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       +
Sbjct: 32  KPSFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVE 91

Query: 64  --------------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +N       +  R +    D   + F  T ++   
Sbjct: 92  RQLAAEGVSRHDLGREAFLEKVWAWKNISGGTITQQMRRVGCSADWQREYF--TMDEARA 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 150 QTVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|163739858|ref|ZP_02147265.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161386892|gb|EDQ11254.1| leucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 868

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + H+GH     + DV+AR+    G  VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARYKLSTGHSVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +   N     +    L +S D      T ++ ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYANIGTMVEQMKPLGLSLDWSRMFATCDESYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V    +G         V+  E   +FF++S Y D+LL+  
Sbjct: 150 RKNAVVNWDPVDMTVLANEQV----EGGRGWRSGALVERRELTQWFFKISDYSDELLTAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           ++   +   +    E       GL+
Sbjct: 206 DTLENWPAKVRLMQENWIGKSRGLQ 230



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 29/175 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  NV+DP+ +I   G D  R+F++ +    +D  +   G +        N + NL
Sbjct: 639 KMSKSKNNVVDPLHIISSYGADTARWFVLSDSPPERDVEWTASGAEAAYKH--LNRVWNL 696

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R   M            GA    DE +L    + ++++  +++    + A+A++ S  
Sbjct: 697 CDRIGEMN----------SGASGNGDEDLLREMHKAIRDVTLSIETFGFNAAIAKLYSFT 746

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +             L K+    A+       + I  LA L+    P LA  I++ 
Sbjct: 747 N------------TLAKSKAGTAAQ-----KQAIMTLAQLMSPMTPHLAEDIWNH 784


>gi|297170267|gb|ADI21304.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_09F21]
          Length = 793

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K Y  + + YP+   H+GH     I D ++R+ RL G +VL   G D  G     A
Sbjct: 30  QNKPKFYCLSMLPYPSGNLHMGHVRNYTIGDAISRYKRLKGFNVLQPMGWDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A +  +  K + D+N ++       L  SYD    + T++  ++   + ++ K+ +KG  
Sbjct: 90  ALDKKIHPKKWTDENIKHMTKQLKSLGFSYDWSKEVNTSDVSYYKFEQEIFIKMFEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V   E + +F +++ Y D+L S 
Sbjct: 150 YRKKSMVNWDPIDKTVLANEQVIDGKG----WRTGADVVRKEIDTWFLKITEYVDELESG 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E        +  +   I   K
Sbjct: 206 LEDIDWPENVVNMQKNWIGKSK 227



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 114/317 (35%), Gaps = 33/317 (10%)

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI 227
           R   +   +   Y++     +        +        D +   K    G     D    
Sbjct: 416 RQRYWGCPIPIVYKNGEPRPVQNLPVELPLGDKDHKPLDQNEHFKNIADGEIRETDTFDT 475

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL-------- 279
            +        Y +        D +   + P DL++ G +    H +Y   F         
Sbjct: 476 FFESSWYFARYTSADNKNKIFDENTNYWLPVDLYIGGVEHAILHLLYARFFHKVLRDMKL 535

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           +  + P  KK+ + G +L  G K+SKS GNV+DP + IE  G D++R F++      +  
Sbjct: 536 VEGDEPF-KKLLTQGMVLKDGAKMSKSKGNVVDPEKYIELYGADSIRTFMIFASPPEQSL 594

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            +  +GL+         G    + R  ++  K       +   F +S+ SI      +  
Sbjct: 595 EWSDNGLE---------GCHRFLKRLYALSEK---IKNRSEDTFKDSNTSIEEEIKELSI 642

Query: 400 EIRENMQNQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +I ++ + +  ++  ++  + + ++++R  D  K       N           ++V   L
Sbjct: 643 KINDDYEKRLNLNTVVSSCMEIFNKLNRRIDKNK--ITADENE---------FLKVYEFL 691

Query: 459 AILLQAFVPKLANKIFD 475
            I L    P +   +++
Sbjct: 692 LISLSPIAPHICEYLYE 708


>gi|331242579|ref|XP_003333935.1| valyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312925|gb|EFP89516.1| valyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1072

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 132/421 (31%), Gaps = 50/421 (11%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME----EEGYFFR 168
            S  GD  +      + L  +    +      A       +    +W         +   
Sbjct: 473 CSKSGDFIEPLIKPQWWLNCKELSQETLKRARAGEIKIAPKATEKEWYSWLEGMRDWCIS 532

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
              +       Y  + E  +  E   +     ++  +  + +++ F            ++
Sbjct: 533 RQLWWGHRCPAYFINIEGQIQDETNGDFWVAGRTLEEAQNKAQQRFPNEKFTLRQDDDVL 592

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPL 286
             W  +     +  G+ D       KF+P+ L   G DI+ F           L+  +P 
Sbjct: 593 DTWFSSGLWPFSIMGWPDKTP-DLEKFYPSSLLETGWDIIFFWVAKMTILGVKLTGKMPF 651

Query: 287 PKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE------------- 332
             +VF H  I    G K+SKS GNVIDPI+VI+ + +DAL   L                
Sbjct: 652 -SEVFCHAMIRDAHGRKMSKSKGNVIDPIDVIDGITLDALANQLQTGNLDEKELKTALAG 710

Query: 333 -----------IACGKDGF-------------YDKDGLKKRVNADLANGIGNLVSRSVSM 368
                        CG D                + D L+        N + N    ++  
Sbjct: 711 QKADFGKTNGIPPCGADALRFALCAYTSSGRSINLDVLRVEGYRKFCNKLWNATRFALLK 770

Query: 369 ILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEV 424
           +   +         G  T  ++ IL   +     + + ++++    A + V         
Sbjct: 771 LDDGFTPRSSADPNGKETLVEKWILHKLNECSLNVNKALEDRSFMAATSAVHEFWLYDLC 830

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           D Y +A KP     T  +   +        + +   LL  F+P +  +++  L    E+ 
Sbjct: 831 DVYIEAMKPMTAPDTPIENKVSAQNTLYTCLDEGLRLLHPFMPFVTEELWQRLPRRPEDA 890

Query: 485 C 485
            
Sbjct: 891 T 891



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 55/158 (34%), Gaps = 21/158 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 139 FVVPAPPPNVTGSLHIGHALTIAIQDTLVRWNRMLGKTVLFNPGFDHAGISTQSVVEKRL 198

Query: 67  V-----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
                             T   + D       +  + L  SYD + R   T + +     
Sbjct: 199 FKATGQTRHDLGREKFLETVFSWKDDYQARITNQLNRLGASYD-WGRARFTMDPQLSKAV 257

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
              + ++ D+G IY+      + +R     +++EV + 
Sbjct: 258 VEAFVRLHDEGVIYRSNRLVNWCVRLNTALSNEEVDQM 295


>gi|257095660|ref|YP_003169301.1| valyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048184|gb|ACV37372.1| valyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 942

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/416 (15%), Positives = 127/416 (30%), Gaps = 90/416 (21%)

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY- 226
           ++   K L+   +      P    N   +   + ++D  +SR+   WG  I         
Sbjct: 376 TSIAGKALACVATGDIRFFPENWVNT-YNQWLNNIQDWCISRQ-LWWGHQIPAWYGQDGR 433

Query: 227 ----------------------------IMYVWIDALTNYLTTTGYLDNPDGS----KAK 254
                                       ++  W  +     +T  +              
Sbjct: 434 IFVAHDEAEARAEATEQGYDGPLTRDADVLDTWYSSALWPFSTLDWTPRWPAETNPALDL 493

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           + P+ + V G DI+ F    +      L+  +P             +G+K+SKS GNV+D
Sbjct: 494 YLPSTVLVTGFDIIFFWVARMVMMTTHLTGKIPFRHVYVHGLIRDAEGQKMSKSKGNVLD 553

Query: 313 PIEVIEE-------------------------------------VGVDALRYFLVREIAC 335
           PI++I+                                       G DALR+  +   + 
Sbjct: 554 PIDLIDGIGLAALIDKRTSGLMNPRQAEQIEKRTRKEFPAGIPAFGTDALRFTFLSLASP 613

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--------GMIPTPGAFTESD 387
           G+D  +D    +     +  N + N  +R V M     D            T  +F+ +D
Sbjct: 614 GRDIKFDLSRCEG--YRNFCNKLWN-AARFVLMHTAGQDLGLAACTGDGCSTALSFSFAD 670

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
             I+S   R   E+ ++  +             + +   D Y +  K  +L+  +  +  
Sbjct: 671 RWIVSKLQRTEAEVAQHYADYRFDLLARATYEFIWDEFCDWYVELAKV-QLQNGDEPQIR 729

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
                   V+  +  L    +P +  +++  +      +   S+     P   + K
Sbjct: 730 ATRRTLARVLETVLRLAHPLLPFITEELWQAVAPIAGRKTHDSVMLAAFPVAQVEK 785



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 22/171 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             I           H+GH +   I D L R+HR+ G + L+  GTD  G           
Sbjct: 41  FCILLPPPNVTGTLHMGHGFNQAIMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQL 100

Query: 60  ------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                       +         K F     +R  R +    D   + F  T +     T 
Sbjct: 101 DAQGVSRHDLGREKFLEKVWEWKEFSGSTITRQMRRLGTSPDWRRERF--TMDAGLSKTV 158

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++  +G IY+G     +    +   +D EV +  +  +      P+
Sbjct: 159 TQTFVRLYREGLIYRGKRLVNWDPVLQTAVSDLEVVQEEEQGHLWHIRYPL 209


>gi|229541183|ref|ZP_04430243.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325603|gb|EEN91278.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 922

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 81/484 (16%), Positives = 156/484 (32%), Gaps = 35/484 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAG---VTTKVFVDQNSRNFRDMADVLDI--SY 91
           F       +      D+ G     A    G         + +       +  +  +  SY
Sbjct: 333 FLIGKKYGLDVICAVDDKGMMTKDAPGFEGLFYDKANKPICEALDQAGALLKLKFLTHSY 392

Query: 92  DDFIRTTEK-RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               RT +      T +        + DI K      ++         + +    D    
Sbjct: 393 PHDWRTKKPVIFRATSQWFASVDMFRDDILKAVEEVNWTPVWGELRMHNMIRDRGDWCIS 452

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +             F     +  +      H   +      N         L     +
Sbjct: 453 RQRA-----WGVPIPVFYAENGEAIITEETIRHVSDLFRKHGSNVWFEREAKDLLPEGFT 507

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G+        IM VW D+ +++       +          PADL++ G D    
Sbjct: 508 HPGSPNGV--FKKETDIMDVWFDSGSSHQGVLAAQEGLKR------PADLYLEGSDQYRG 559

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    +  ++   P    +     +  +G K+SKSLGN I P +V+E++G D +R +
Sbjct: 560 WFNSSLITSVAVTGRAPYDGVLSHGFVLDGEGRKMSKSLGNTILPGKVVEQLGADIIRLW 619

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
           +        D     + LK+   +++   I N   R +   L D+D            E 
Sbjct: 620 VASVDYQA-DVRVSNEILKQV--SEVYRKIRNTF-RFMLGNLNDFDPARHQVAYEELREV 675

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPD 442
           D  +L   +++++E+RE  +          V +         Y D  K     +   NP+
Sbjct: 676 DRFMLVKLNKLVKEVREAYERYEFATIYHAVNNFCATDLSSFYMDFAKDVLYIELADNPE 735

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR--LKPGFML 499
           R   +  V  E +  L  LL   +P  A++++  +  VA+E+     + +   L     L
Sbjct: 736 R-RAMQTVLYECLVALTKLLSPILPHTADEVWQYIPGVAEESVQLTDMPEYVDLPDASAL 794

Query: 500 HKTF 503
            + +
Sbjct: 795 EEKW 798



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   H+GHA    + D++ RF  + G    +  G D HG  I + 
Sbjct: 45  EGRPLFVLHDGPPYANGDLHMGHALNKTLKDIINRFKSMTGYHAPYVPGWDTHGLPIEQE 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +  +     R     L +  D      T    +     
Sbjct: 105 LTKKGVDRKSMSVAEFRKLCEKYAHEQIDRQRTAFKRLGVRGDWENPYLTLRPAYEAEQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ +++ KG IYKG    ++S   E+   D E+  
Sbjct: 165 KVFGEMAKKGYIYKGLKPVYWSPSSESALADAEIEY 200


>gi|170092373|ref|XP_001877408.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647267|gb|EDR11511.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1078

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 105/271 (38%), Gaps = 14/271 (5%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y         +  PAD    G D     F+ +   +  L  
Sbjct: 527 EEVFDCWFESGSMPYAQQHYPFENKELFERTHPADFVSEGIDQTRGWFYTLLVLSTHLFG 586

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
             P    + +   +   G+K+SKSL N  DP  +I++ G DA R FLV       D   +
Sbjct: 587 KAPWKNLIVTGLVLAADGKKMSKSLRNYPDPNIIIDKYGADATRMFLVNSPIVRGDNLRF 646

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMIL-------KDYDGMIPTPGAFTESDESILSVC 394
            +DG+++ +   L   + N     +  +         D+      P      D  IL+ C
Sbjct: 647 REDGVREVIARVLLPWL-NSFRFFLGHVALFKKVNGIDFTYNAHAPLPNNVMDRWILARC 705

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +++ +RE M    ++  + +++ L+ E+ + Y    +     +   +  +  L    E
Sbjct: 706 QSLIKLVREEMAAYRLYTIIPRLLDLIDELTNWYIRFNRKRLKGEDGKEDTNLALNTLFE 765

Query: 454 VIRQLAILLQAFVPKLANKIFDIL--FVADE 482
            +  L   L ++ P +   ++  L  F+ ++
Sbjct: 766 ALLTLCRTLSSYTPFITENLYQSLRNFIPED 796



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +          +    PH GH     I D++ R   + G  V    G D HG  +   
Sbjct: 39  EGKPAFTFYDGPPFATGLPHYGHLLAGTIKDIVTRHAHVSGYHVSRRFGWDTHGLPVEHE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  +R   + +   I +D+  +T     
Sbjct: 99  IDKRLGITGKEDVMKMGIDKYNEECRKIVMRYSSEWRQTVERMGRWIDFDNDYKTLNLPF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++    + ++  KG +Y+G     YS       ++ E
Sbjct: 159 MESVWWAFSELFKKGMVYRGLRVMPYSTGCTTPLSNFE 196


>gi|13508219|ref|NP_110168.1| valyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501066|sp|P75304|SYV_MYCPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1674039|gb|AAB96009.1| valyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 838

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 125/345 (36%), Gaps = 49/345 (14%)

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----------------------- 226
            +R N+ ++   S LK   +SR+   WG  IP                            
Sbjct: 383 PKRFNKQVTRWLSQLKPWCISRQ-LIWGHPIPVWTHKQSGALHVGSTAPTDKQNYTQSTD 441

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W  +    L    +  N         P DL V G DIL F  +     ++  +  L
Sbjct: 442 VLDTWFSSSLWPLICLDWHKNKHFV-----PTDLLVTGYDILFFWVLRMTFNSYFQTKQL 496

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +        +  K+SKSL N I+P+++I + G DA R FL      G D  +++ 
Sbjct: 497 PFKQVLIHGLVRDAQNRKMSKSLNNGINPMDLIRDYGADATRLFLTSNHTPGDDLIFNEQ 556

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK   N    N + N V++ V  + +    +  T    T S+  I +   +++ +  + 
Sbjct: 557 KLKSAAN--FLNKLWN-VTKYVLQLGEQAKTVPSTHLPSTLSERWIWAKLKQLIVQTTKL 613

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +    +  A   +++ +     + + +      +K+ +      +      V+    ++L
Sbjct: 614 LDKYQLALANQALVNFIWNDFCNTFIE-----TIKQEDTALLPQLYTTAKTVLSTAVVML 668

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               P LA +I+             S+ Q   P     K    +F
Sbjct: 669 STVTPFLAERIYQQFHSG-------SVMQASWPTAKAVKPPK-LF 705



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 20/149 (13%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ K+  +  +  PN     HIGHA+E+ I D + RF RL G  V +  G D  G     
Sbjct: 33  QKNKVPFTAILPPPNLTGTLHIGHAFEVSITDQIMRFKRLRGYGVNWIPGFDHAGIATQT 92

Query: 61  AAQNAGVTTK----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
             +     T                  +        +     L  S  ++    T  K+ 
Sbjct: 93  KYEKLARETNPEYFQAPRKQKVKMIMDWALTQGDTIQSQIKSLGASLNWNQVNFTLSKKA 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                  + ++ ++G IY+      +  +
Sbjct: 153 SQIVNDSFIQLFEQGFIYQAETLVNWDTK 181


>gi|308069985|ref|YP_003871590.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859264|gb|ADM71052.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 812

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 36  GKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQH 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   +    +N  NFR     L  SY  D  I TT+  ++   + ++ ++  +G  
Sbjct: 96  ALDTGEHPREITVKNVNNFRRQIKSLGFSYDWDREISTTDPDYYKWTQWIFIQLYKRGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  +++ Y D+LL  
Sbjct: 156 YVAEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVVRKPMRQWMLKITEYADRLLED 211

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 212 LEELDWSESIKDMQRNWI 229



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 42/270 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++ +     K + W P DL++ G +    H +Y   + 
Sbjct: 493 ETNTMPQWAGSCWYYLRFIDPKNDKELVSKEKQREWMPVDLYIGGAEHAVLHLLYARFWH 552

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  K V     + +  EK+SKS GNVI+P +++   G D LR + + 
Sbjct: 553 KVLYDIGVVETKEPFYKLVNQGMILGNNNEKMSKSRGNVINPDDIVNTFGADTLRIYEMF 612

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    ++++G++         G    +SR   + + +   +         SDE   
Sbjct: 613 MGPLEATKPWNENGVE---------GAHRFLSRVWRLFVSEDGSLNDKITNDGGSDE-FN 662

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + L+++ E++     + A++Q++   ++  +                       + 
Sbjct: 663 RTWHKTLKKVTEDLDALRFNTAISQLMIFTNDAYK--------------------ADLLP 702

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +     +L    P LA +++ +L   D
Sbjct: 703 RAAMENFVQMLSPLAPHLAEELWQLLGHND 732


>gi|301633478|gb|ADK87032.1| valine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 838

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 125/345 (36%), Gaps = 49/345 (14%)

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----------------------- 226
            +R N+ ++   S LK   +SR+   WG  IP                            
Sbjct: 383 PKRFNKQVTRWLSQLKPWCISRQ-LIWGHPIPVWTHKQSGALHVGSTAPTDKQNYTQSTD 441

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANL 284
           ++  W  +    L    +  N         P DL V G DIL F  +     ++  +  L
Sbjct: 442 VLDTWFSSSLWPLICLDWHKNKHFV-----PTDLLVTGYDILFFWVLRMTFNSYFQTKQL 496

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +        +  K+SKSL N I+P+++I + G DA R FL      G D  +++ 
Sbjct: 497 PFKQVLIHGLVRDAQNRKMSKSLNNGINPMDLIRDYGADATRLFLTSNHTPGDDLIFNEQ 556

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK   N    N + N V++ V  + +    +  T    T S+  I +   +++ +  + 
Sbjct: 557 KLKSAAN--FLNKLWN-VTKYVLQLGEQAKTVPSTHLPSTLSERWIWAKLKQLIVQTTKL 613

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +    +  A   +++ +     + + +      +K+ +      +      V+    ++L
Sbjct: 614 LDKYQLALANQALVNFIWNDFCNTFIE-----TIKQEDTALLPQLYTTAKTVLSTAVVML 668

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
               P LA +I+             S+ Q   P     K    +F
Sbjct: 669 STVTPFLAERIYQQFHSG-------SVMQASWPTAKAVKPPK-LF 705



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 20/149 (13%)

Query: 3   EREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ K+  +  +  PN     HIGHA+E+ I D + RF RL G  V +  G D  G     
Sbjct: 33  QKNKVPFTAILPPPNLTGTLHIGHAFEVSITDQIMRFKRLRGYGVNWIPGFDHAGIATQT 92

Query: 61  AAQNAGVTTK----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
             +     T                  +        +     L  S  ++    T  K+ 
Sbjct: 93  KYEKLARETNPEYFQAPRKQKVKMIMDWALTQGDTIQSQLKSLGASLNWNQVNFTLSKKA 152

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                  + ++ ++G IY+      +  +
Sbjct: 153 SQIVNDSFIQLFEQGFIYQAETLVNWDTK 181


>gi|85101721|ref|XP_961203.1| leucyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|135142|sp|P15181|SYLM_NEUCR RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|168830|gb|AAA33599.1| leucyl-tRNA synthetase [Neurospora crassa]
 gi|11595633|emb|CAC18253.1| leucine--tRNA ligase precursor, mitochondrial [Neurospora crassa]
 gi|28922744|gb|EAA31967.1| leucyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 994

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 5/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +  Y+     YP+   H+GH     IADV+ARF  L G  VL   G D  G     A
Sbjct: 81  EDEKNKYVLPMFPYPSGHLHLGHLRVYTIADVIARFQTLQGHKVLLPMGWDAFGLPAENA 140

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +   N    ++    ++ S+D    + T +   +   + ++  + +KG  
Sbjct: 141 AIERGINPATWTKANIAKMKEQLGHMNGSWDWNCELATCDPDFYKHTQKIFLALHEKGLA 200

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V          A+   V+  + + +F ++S +++ LL  
Sbjct: 201 YQAEAEVNYDPVDKTVLANEQVDANGCSWRSGAR---VEKRKLKQWFLKISEFRESLLKD 257

Query: 180 YESHPEFILPIERRNEVISFV 200
            E+  +     ER   +    
Sbjct: 258 LETLAKNEAWPERVLAMQKNW 278



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 28/207 (13%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK V +        EK+SKS  N +DP   I + G DA R  ++ +    +   +D+  +
Sbjct: 682 PKVVATGALANVSYEKMSKSKHNGVDPTTFIAQYGADATRAHILFQAPVSEILDWDESKI 741

Query: 347 --KKRVNA---DLANGI-GNLVSRS---VSMILKDYDGMIPTPGAFTESDE-----SILS 392
               R  +   DL   I  +  S +    S +   ++     P +  +  +     +I  
Sbjct: 742 TGVTRWLSRVHDLVQKIACSSTSETPSSASTVKAFFEQQQQQPESVADPAKLDASITIWR 801

Query: 393 VCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
              R +  +  +      ++  ++ ++SL + +        P      +P        + 
Sbjct: 802 EVQRTISSVTASYNKVYTLNTVISDLMSLTNVI------ASPSNYDAADP-------LIR 848

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
            E +  L  ++    P  A + + +LF
Sbjct: 849 REAVSALIRMMAPVAPAFAEECWHVLF 875


>gi|257387585|ref|YP_003177358.1| valyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169892|gb|ACV47651.1| valyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 908

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 129/392 (32%), Gaps = 22/392 (5%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +  H        +    +  + +  Y       DE      ++    +  +   +H  ++
Sbjct: 360 DHDHTVQVHERCET-EVEYLVTEQWYVEMLDRTDEYLEAGRQMDWHPEKMFSRYEH-WIE 417

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E +    R       +  +Y       +P  + +  +      L D        + G 
Sbjct: 418 GLEWDWCISRQRDSGIPIPVWYCEDCGEPIPANKADLPVDP----LSDEPPVDACPECGH 473

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFHAI 273
                 + +   W  +    L   G+  +           + +  DL   G DI+ F   
Sbjct: 474 DDLRPEEDVFDTWATSSLTPLVNAGWDWDAEAEAFSMENPELYSFDLRPQGHDIISFWLF 533

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    E +SKS GNVI P +V+EE  VDA RY+   
Sbjct: 534 HTVVKCYEHTGEVPFDNVMINGMVLDENREAMSKSKGNVIPPSDVLEEFPVDATRYW-AA 592

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G D  Y +  L+      L   + N       +                  DE  L
Sbjct: 593 GTSIGDDFPYKEGDLEA--GERLLQKLWNASRLVEQLAPAPEAVDPVDESDLAPIDEWFL 650

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     ++ + +  +     +A  ++ S       D Y +  K    ++ + D +++  +
Sbjct: 651 AELDATVESVTDRFEAYEFSKARNELRSFFWNSFCDDYLEIAK----QRLSGDGSASTEF 706

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 R    L   F+P +  +++D ++  D
Sbjct: 707 ALTRAHRTFLKLFAPFLPHITEELWDRIYRTD 738



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  I T     +   H+GH Y+  + D +AR+HR+    V F  G D++G    +  +  
Sbjct: 57  RYSIDTPPPTVSGNLHMGHLYQFTLQDFVARYHRMADDTVYFPFGYDDNGIASERLTERE 116

Query: 66  -------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILW 110
                            +   +     F +    L IS  +D+  +T E R     ++ +
Sbjct: 117 KGIRHQDFERRVFQEKCREVCETYEAEFTEDVQSLAISVDWDNTYKTIEPRVQRVSQLSF 176

Query: 111 KKISDKGDIYKGCYSGWYSLRDE 133
             + +KG  Y+      +    E
Sbjct: 177 IDLYEKGREYRQRAPTIWCPDCE 199


>gi|327305015|ref|XP_003237199.1| valyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326460197|gb|EGD85650.1| valyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 1049

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 112/357 (31%), Gaps = 48/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E     +    +    ++  +  + + K F     +    
Sbjct: 507 WCLSRQLWWGHQAPAYFVDIEGEKGDDADGNLWVTGRTEEEARAKAEKKFPGKKFVLKRD 566

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+           +P  +   G DIL F    +      ++ 
Sbjct: 567 PDVLDTWFSSGQWPYSTLGWPKKTH-DLENLYPVSILETGWDILFFWVARMIMLGIKMTG 625

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P  K+V+ H  I   +G K+SKSLGNV+DPI+V+                        
Sbjct: 626 QVPF-KEVYCHSLIRDSEGRKMSKSLGNVVDPIDVMNGISLQKLHDKLLEGNLAEKEVAI 684

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR+ L+     G D  +D   +         N I      
Sbjct: 685 ATKFQKKAFPKGIPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKF 742

Query: 365 SVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +  +  D+         G  + S+  IL   ++  +   E ++N+    A   +     
Sbjct: 743 VLGKLGDDFRPQATPSKTGKESLSERWILHKFNQAAKVTNEALENREFSVAANTIYQYWY 802

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  K       +P    +        +     L+   +P +  +++  L
Sbjct: 803 SQLCDVFIENSKSLLQPDADPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 859



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K +E  Y    I  PN     H+GHA    + D + R+ R+ G  VL+  G D  G    
Sbjct: 120 KVKEAGYFVIPIPPPNVTGALHMGHALTKALQDTMIRWQRMKGKTVLYLPGYDHAGISTQ 179

Query: 60  KAAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +     T                   +  +   +       L  S+D      T ++
Sbjct: 180 SVVEKILWKTEKKSRHDIGREAMVGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDE 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+G     + 
Sbjct: 240 NLSAAVTETFVRLHEEGTIYRGNRLVNWC 268


>gi|222825097|dbj|BAH22254.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Cadra
           cautella]
          Length = 143

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/140 (52%), Positives = 98/140 (70%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M++ E  YI+T I Y N +PHIGHAY  +I DV ARF +L G +V FTTGTDEHGQKI K
Sbjct: 1   MEQFESFYITTPIYYVNDKPHIGHAYTSLICDVTARFVKLAGKNVKFTTGTDEHGQKIEK 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           AA+  G+  K F D+ S  FR +A++++ + DDFIRTTE+RH      LW ++ ++G IY
Sbjct: 61  AAKTKGIEPKEFTDEISVTFRKLAELMNFNSDDFIRTTEERHEQAVIALWNRLEERGQIY 120

Query: 121 KGCYSGWYSLRDEAYYNDDE 140
              YSGWYS+RDEA+Y + E
Sbjct: 121 LDSYSGWYSVRDEAFYQESE 140


>gi|154706590|ref|YP_001424258.1| valyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|154355876|gb|ABS77338.1| valyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 920

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 138/395 (34%), Gaps = 86/395 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + +F ++ A     +   ES     +P       + ++   ++D  +SR+   W
Sbjct: 348 IEPLLTDQWFIKMEALAKPAMEAVESGELKFIPKNWEKTYLQWLS-NIQDWCISRQ-LWW 405

Query: 217 GI--KIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G    +  D +                             ++  W  A      T G+ +
Sbjct: 406 GHRLPVWYDEEKNSYVGRSREEILKKYHLSPDVKLQQETDVLDTWFSASLWPFATLGWPE 465

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KG 300
             +  K  F+P  + V G DI+ F    W A ++   L L  K+  H   +H      +G
Sbjct: 466 KTESFKT-FYPTQVLVTGFDIIFF----WVARMVMMGLKLTHKIPFHSVYIHGLIRDSQG 520

Query: 301 EKISKSLGNVIDPIEVIEE-------------------------------------VGVD 323
            K+SKS GNVIDPI++I+                                       G D
Sbjct: 521 RKMSKSKGNVIDPIDIIDGISLDALIEKRTHALLQPKMAKTIEKMTRKEFPNGIASFGTD 580

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+      + G+D  +D   +      +  N I N  +R V+M  ++ D     P ++
Sbjct: 581 ALRFTFCALASRGRDINFDMGRIDG--YRNFCNKIWN-AARFVTMNTQEKDLNPEKPLSY 637

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT-N 440
           + +DE I +   + ++   E +           +         D Y +  K     +   
Sbjct: 638 SAADEWIRTRLQQTIKNAEEALSQYRFDLLAQTLYEFTWNEYCDWYVEFAKCILYDEQAK 697

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        +EV+  L  LL   +P +  +I+ 
Sbjct: 698 PAQLRGTRVALLEVLEILLRLLHPVMPFITEEIWQ 732



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 24/170 (14%)

Query: 10  STAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
              +  PN     H+GH ++  + D L R+HR+ G   L+  GTD  G       +    
Sbjct: 34  CIMLPPPNVTGTLHMGHGFQQTLMDTLIRYHRMKGERTLWQGGTDHAGIATQMVVEQQLA 93

Query: 68  TT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                      + F+ +                R +   +D S + F  + ++       
Sbjct: 94  QEDLTREDLGRQAFIKRVWEWRERSGGKITHQMRRLGVSIDWSRERF--SMDEGLSRATT 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + ++  +G IY+G     +  +     +D EV       +      P+
Sbjct: 152 EAFIRLHHEGLIYRGKRLVNWDPKLNTAISDLEVVTEEVEGHLWHIRYPL 201


>gi|120437508|ref|YP_863194.1| isoleucyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579658|emb|CAL68127.1| isoleucyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 1134

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 13/271 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYW 275
           K       ++ VW D+ +   +   Y           W  AD    G D     F+ ++ 
Sbjct: 596 KPMKREADLIDVWFDSGSMPYSQWHYPFENKEKVEDKWRKADFIAEGVDQTRGWFYTLHA 655

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A ++  ++     V +   +   G+K+SK LGN  DP E I   G DA R++++     
Sbjct: 656 IATMIFDDVAYKNVVSNGLVLDKNGQKMSKRLGNAADPFETISVYGPDATRWYMIANANP 715

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESI 390
             +  +D +G+ +         + N  S  +  +  + D               E D  I
Sbjct: 716 WDNLKFDIEGIGEVQ-RKFFGTLYNTYSFFI--LYANIDEFSYAEDDVALEKRPEIDRWI 772

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVL 448
           LS    +++ + +   +    +A   +   V E   + +    +    K        +  
Sbjct: 773 LSELHTLIERVDKFYADYEPTKATRAISEFVQENLSNWFVRLSRRRFWKGDYEQDKISAY 832

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                 +  +A L     P   +++F  L V
Sbjct: 833 QTLYTCLETVAKLGAPVAPFFMDRLFKDLNV 863



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E           N  P I H     I D+  R+    G  V    G D HG  +   
Sbjct: 38  EGKEPFIFFEGPPSANGLPGIHHVMARAIKDIFCRYKTQKGFQVKRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK  +                  + +  + D+   +   +  +D   T + ++
Sbjct: 98  VEKELGITKEDIGTKISIEKYNEACKNAVMRYTDVWNDLTKKMGYWVDMEDPYVTYKSKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +T   L  +I +K  IYKG     YS +
Sbjct: 158 METVWWLLSEIYNKDLIYKGYTIQPYSPK 186


>gi|323345307|ref|ZP_08085530.1| isoleucine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093421|gb|EFZ35999.1| isoleucine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 1201

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 108/293 (36%), Gaps = 30/293 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------------------KFWPA 258
           K       ++ VW D+ +       Y    + +                      K++PA
Sbjct: 652 KPMYRETDLIDVWFDSGSMPYAQLHYPFEGEMAYGTESDRKAMIESNYDKTAIPPKYYPA 711

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D    G D     F  ++  A ++  ++     + +   +  KG K+SK LGNV DP E+
Sbjct: 712 DFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHLGNVTDPFEM 771

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + + G D +R++++       +  +D +G+ +                ++   +  +D  
Sbjct: 772 MSKYGADPVRFYMMTNSEPWDNLKFDPEGVDEVRRKFFGTLYNTYSFFALYANVDGFDPK 831

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDA 430
                     E D  ILS    +++ +   +      RA   + S V++   + +   + 
Sbjct: 832 VQPIAFDKRPEIDRWILSELHSLIENVDTELIEYDPTRAGRLIDSFVNDDLSNWFVRLNR 891

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++ W   K   +   +      E +  +A LL  F P  A++++  L    E+
Sbjct: 892 KRFW--GKEMSEDKLSAYQTLYECLMTVAKLLAPFAPFYADQLYHDLGGKLES 942



 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 61/205 (29%), Gaps = 25/205 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFVFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMKGFQVHRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V + ++ +R++ + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKKSEKYISVEDYNRKCRENVMKFTKEWRELTEEMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           ++ +T   L K++ +KG +YKG     YS       +  E+ +                 
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVTALF 219

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPE 185
           E        + +       + + P 
Sbjct: 220 EALNPKEEWAIWGTPYFIAWTTTPW 244


>gi|227540565|ref|ZP_03970614.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239647|gb|EEI89662.1| valine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 884

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/319 (19%), Positives = 116/319 (36%), Gaps = 20/319 (6%)

Query: 174 DKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
             +                +NE + +  +        S+     GI+  DD   ++  W 
Sbjct: 412 WCISRQLWWGQRIPAWYNDKNEWVVAKTQEEAIQEFTSQGKSADGIRQEDD---VLDTWF 468

Query: 233 DALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKK 289
            +    ++      +  +     ++P +  V   +IL F    +       +   P    
Sbjct: 469 SSGLWPMSVFDGVRNPENEDFNYYYPTNDLVTAPEILFFWVARMMIMGHNYTGKAPFKNV 528

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
             +       G K+SKSLGN  DPIE++E+ G D +R  ++     G D  +D    ++ 
Sbjct: 529 YLTGIVRDKLGRKMSKSLGNSPDPIELMEQYGTDGVRVGMLLSSPAGNDLMFDVSYCEQ- 587

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
              + AN I N    +  ++        P P A   S     S  ++ L EI E+  +  
Sbjct: 588 -GRNFANKIWN----AFRLVKGWEISNEPAPEADRTSAAWFESRFNQALVEIEEHFASYR 642

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +  AL     L+ +     Y +  KP      +P  A T         +++  L   F+P
Sbjct: 643 LSDALMATYKLIWDDFCAWYLELIKP---AYGSPIPAET-FETAKGFFQRVLTLAHPFMP 698

Query: 468 KLANKIF-DILFVADENRC 485
            L  +++ D LF   E++ 
Sbjct: 699 FLTEELWHDELFGKREDKD 717



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 47/157 (29%), Gaps = 18/157 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 45  EREPYTIVMPPPNVTGVLHMGHMLNNTIQDVLIRRARMQGKNACWVPGTDHASIATEAKV 104

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                                    + ++         + L  S D      T +    +
Sbjct: 105 VAMLKEQGIDKKSISREDFLKYAWEWKEKYGGIILKQLEKLGASCDWERTKFTMDPDLSE 164

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + K   +G IY+G     +  + +   +D+EV
Sbjct: 165 AVLDTFIKFYKEGYIYRGVRMVNWDPQGKTALSDEEV 201


>gi|115454745|ref|NP_001050973.1| Os03g0694900 [Oryza sativa Japonica Group]
 gi|28273401|gb|AAO38487.1| putative valyl tRNA synthetase [Oryza sativa Japonica Group]
 gi|37700350|gb|AAR00640.1| putative valyl tRNA synthetase [Oryza sativa Japonica Group]
 gi|108710540|gb|ABF98335.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108710541|gb|ABF98336.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549444|dbj|BAF12887.1| Os03g0694900 [Oryza sativa Japonica Group]
          Length = 1054

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 129/385 (33%), Gaps = 47/385 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +  +  +Y    N   W      ++    ++           +  +        I   
Sbjct: 490 IPQQYEQDWYRWLANIRDWCISRQLWW---GHRVPAWYVILEDDQEKILGSANGRWIVAR 546

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                +L   +K      ++  DP  ++  W  +    LT  G+ D+    KA F+P  +
Sbjct: 547 NESEANLEAQQKYPGKKFELHQDPD-VLDTWFSSGLFPLTVLGWPDDTADLKA-FYPGSV 604

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DI+ F    +      L  ++P  K           G K+SKSLGNVIDP++VI 
Sbjct: 605 LETGHDIIFFWVARMVMMGMQLGGDVPFEKVYLHPMIRDAHGRKMSKSLGNVIDPVDVIN 664

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKK--------------------------RVNA 352
            + +D L   L        +     +G KK                          ++N 
Sbjct: 665 GISLDGLLKRLKEGNLDPNELNIATEGKKKDFPDGIAECGTDALRFALVSYTSQSDKINL 724

Query: 353 DL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIR 402
           D+          N +  ++   +         P   +        + ILSV ++ + +  
Sbjct: 725 DIKRVVGYRQWCNKLWNAIRFAMGKLGNHYTPPATISVTTMPPICKWILSVLNKAIGKTV 784

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV-IRQL 458
            +++      A + + S       D + +A KP+    +   + A       + V +   
Sbjct: 785 TSLEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQEFESARAASRDALWVCLDTG 844

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             LL  F+P +  +++  L    ++
Sbjct: 845 LRLLHPFMPYVTEELWQRLPQPKDS 869



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 121 SSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWRRMSGYNTLWVPGVDHAGIATQVV 180

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + D+      +    L  S D      T +K  
Sbjct: 181 VEKKLMRERNLTRHDIGREEFVSEVLKWKDEYGGTILNQLRRLGASLDWSRECFTMDKPR 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +D EV  
Sbjct: 241 SKAVTEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVEVDY 281


>gi|325126199|gb|ADY85529.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 804

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV   +   +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRKMRQWMLKITAYADRLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSVG 226



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 74/452 (16%), Positives = 142/452 (31%), Gaps = 59/452 (13%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
            +G     A          F  +     +++ +  DIS + F                  
Sbjct: 328 TYGTGAVMAVPAHDERDYSFATKFDLPIKEVVEGGDISKEAF----AGDGVHVNSDFLNG 383

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + ++    K           E   N          Q Y  +  PV   E+          
Sbjct: 384 LHNEEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPED- 442

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                          LP E   +     +S L +L+      D   +        M  W 
Sbjct: 443 ----------ELPLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWA 492

Query: 233 ---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y+         D    K W P DL++ G +    H +Y   +         +
Sbjct: 493 GSSWYFLRYIDPNNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVV 552

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K +++ G IL   EK+SKS GNV++P +V++E G D+LR + +          
Sbjct: 553 PTKEPFQK-LYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLNASID 611

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +D +G          +G+   + R     + D D   IP+     ++D  +  + +  ++
Sbjct: 612 WDDNG---------PSGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVK 662

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + E+ +    + A++Q++  ++                        V  +  E      
Sbjct: 663 TVTEHFEELRFNTAISQMMVFMNAC--------------------QKVDKIPREYAEGFV 702

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            L+    P +  +I+ +    DE+  F +   
Sbjct: 703 KLMAPVAPHMMEEIWHVFG-HDESVQFAAWPT 733


>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81786425|sp|Q9K9V0|SYI_BACHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 921

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 75/473 (15%), Positives = 157/473 (33%), Gaps = 29/473 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF---VDQNSRNFRDMADVLDI--SY 91
           +       +      D+ G   A+A    G+        + Q       +  +  I  SY
Sbjct: 333 YIVGQKYGLDVLCPVDDKGYMTAEAPGFEGLFYDEANKPITQKLDECGALLKLTFITHSY 392

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               RT +   +      +  I +  D              E             G +  
Sbjct: 393 AHDWRTKKPVIYRATAQWFASIENFRDELLRAI-QEVKWVPEWGETRLYNMVRDRGDWCI 451

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           ++             F     +  +     +H   +      N    +    L     + 
Sbjct: 452 SRQR---VWGVPIPIFYGENGEPIITDETINHVSELFRKHGSNVWFEWETKDLLPEGFTH 508

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           ++   G         IM VW D+ +++             +    PADL++ G D     
Sbjct: 509 ESSPNG--QFTREMDIMDVWFDSGSSHQGVLVER------EELDRPADLYLEGSDQYRGW 560

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    +  ++   P    +     +  +G+K+SKSLGNV+ P +V++++G D LR ++
Sbjct: 561 FNSSLSTSVAITGKAPYKGVLSHGFTLDGEGKKMSKSLGNVVIPNDVMKQLGADILRLWV 620

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPGAFTESDE 388
                   D       LK+   +++   I N     +  +   +              D 
Sbjct: 621 ASVDYQA-DVRVSDKILKQV--SEVYRKIRNTYRFLLGNLHDFHPATHRVAIDQLNGLDR 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPDRA 444
            +L+  + V+  +++            ++ +   +     Y D  K     K   +PDR 
Sbjct: 678 YMLAKLNDVINRVKKAYDEYQFSTVYHELHNFCTIELSSFYMDIAKDTLYVKHADHPDRR 737

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPG 496
           +T   V  +V+  LA LL   +P  A++++  +  V +E+     + + ++ G
Sbjct: 738 AT-QTVMYDVLVALAKLLSPIIPHTADEVWKHIPGVEEESVQLTDMPEPIELG 789



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D++ R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDMIVRYKSMAGFHAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
              +GV  K             F  +     R+    L +  D +    T +K       
Sbjct: 105 LTKSGVDRKSMSVAEFRKLCEEFARKQIDRQREQFMRLGVRGDWWNPYVTLDKGFEAQQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYHDKRSPSIYVAFPV 214


>gi|330723608|gb|AEC45978.1| valyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 831

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 72/348 (20%), Positives = 131/348 (37%), Gaps = 46/348 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ + +  +F  +      LL +  S  + +    +  + +      + D ++SR+   W
Sbjct: 347 VEILVQPQWFISMKKLAQNLLEHLNSKDKVLFYPSKFRKTMISWMENVHDWTISRQ-LWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G +I                       + ++  W  +        G+    D  K K++P
Sbjct: 406 GHRIPVWYKNEEIKVQKQNPGAGWIQDEDVLDTWFSSGLTPFVFLGWPQKLDIVK-KYYP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            +L V G DI+ F    +Y+ A  ++   P    +         G+K+SKSLGN IDP+E
Sbjct: 465 TNLLVTGWDIIFFWVARMYFLALEITKKKPFNAVLLHGLIRDMNGKKMSKSLGNGIDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VIEE G D LR  L+     G+D  ++ + L    +  L N + N        I K    
Sbjct: 525 VIEEYGSDVLRATLIFNSTPGQDIKFNIEKLNAAWS--LNNKLWN--------IAKYIKS 574

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
           +          D  IL+  + + + I + M           +   V       Y +  K 
Sbjct: 575 LESKKTKQNFVDLWILNKLTVLNKTISKYMNKYNFSLISKSINEFVFEDFSSWYIELNK- 633

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                          Y   +V++++ I+L  F+P L + +F  +F  +
Sbjct: 634 ----------LHQNGYHLRKVLKKVLIVLHPFIPFLTDYLFKEIFNEE 671



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 18/136 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I         + H+GHA++  + D + RF +L G DVLF    D  G       +
Sbjct: 31  KKPFSIILPPPNVTGKLHLGHAWDSYLQDTIIRFKKLKGYDVLFLPAVDHAGIATQAKVE 90

Query: 64  NA----------------GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
                                   + D+  +N ++    L + +D      T + +  + 
Sbjct: 91  EKLLKQNIKKEDLGRQKFLEKVFEWKDEYYQNIKEQWFKLGLGFDYTKERFTLDPQAQEA 150

Query: 106 CRILWKKISDKGDIYK 121
              ++  +  KG IYK
Sbjct: 151 VSDVFVTLYKKGFIYK 166


>gi|154498312|ref|ZP_02036690.1| hypothetical protein BACCAP_02301 [Bacteroides capillosus ATCC
           29799]
 gi|150272623|gb|EDM99801.1| hypothetical protein BACCAP_02301 [Bacteroides capillosus ATCC
           29799]
          Length = 817

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y      YP+ Q  H+GH       DV+AR  R+DG +VLF  G D  G     
Sbjct: 37  SDKPKFYGLVEFPYPSGQGLHVGHTRPYTAMDVVARKRRMDGYNVLFPMGYDAFGLPTEN 96

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +        N  NF     +L  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 97  YAIKNHIHPAKVTHDNIENFTKQLHMLGYSFDWDRVINTTDPSYYKWTQWIFLQLWKKGL 156

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G          +PV   E+  +  +++ Y  +L+ 
Sbjct: 157 AYKSTMPVNWCTSCKCVLANEEVVDG----VCERCGSPVIRKEKSQWMLKITEYAQRLID 212

Query: 179 YY 180
             
Sbjct: 213 DL 214



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 121/352 (34%), Gaps = 60/352 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+ + E+ G+          LL   +S+          +++  +V +
Sbjct: 431 WVFSRQRYWGEPIPMVYCEKCGWQPLPEDQLPLLLPDVDSYEPTDDGESPISKMTDWVNT 490

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PA 258
                         G     +    M  W         Y+              ++W P 
Sbjct: 491 ---------TCPHCGGPAKRETD-TMPQWAGSSWYFLRYMDPHNDKALASKEALEYWSPV 540

Query: 259 DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           D +  G +    H +Y   +         +    P  K+      +   GEK+SKS GNV
Sbjct: 541 DWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYQKRTSHGMILGEGGEKMSKSRGNV 600

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+ + G D +R +++      K   +  + +K         G    + R  ++  
Sbjct: 601 VNPNDVVAQYGADTMRTYIMFIGDFEKAASWSDNAVK---------GCKRFLDRVWNLSE 651

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
              D M  +            S   + ++++ ++++    + A+A +++LV   + ++  
Sbjct: 652 NLTDSMDYSAANE--------SAIHKTIKKVSDDIEAMKFNTAIAALMALV---NDFYAN 700

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                   +  D A+            L ++L  F P +  ++++ L  A +
Sbjct: 701 GC------SKGDYAA------------LLLMLSPFAPHMVEELWETLGYAAQ 734


>gi|86134934|ref|ZP_01053516.1| isoleucyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821797|gb|EAQ42944.1| isoleucyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 1155

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 92/278 (33%), Gaps = 7/278 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDIL--RFHAIYW 275
           K       ++ VW D+ +       Y           W  AD    G D     F+ ++ 
Sbjct: 617 KPMKRESDLIDVWFDSGSMPYAQWHYPFQNKELVDTTWRKADFIAEGVDQTRGWFYTLHA 676

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            A ++  ++     V +   +   G K+SK LGN  DP   +   G DA R++++     
Sbjct: 677 IATMIFDDVAYKNVVSNGLVLDKNGHKMSKRLGNAADPFTTLSTYGADATRWYMISNANP 736

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSV 393
             +  +D +G+++                S+   +  +             E D  ILS 
Sbjct: 737 WDNLKFDLEGIEEVKRKFFGTLYNTYSFFSLYTNIDGFAYKEADIALNERPELDRWILSE 796

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
              ++ ++ +   +    RA   +     E   + Y    +    K T      +     
Sbjct: 797 LHTLINKVDKFYSDYEPTRAARAISDFTQEYLSNWYVRLSRRRFWKGTYETDKISAYQTL 856

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              +  +A L     P   ++++  L    +    +S+
Sbjct: 857 YTCMTTVAKLAAPIAPFFMDRLYQDLNSVTQKEQSESI 894



 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 50/146 (34%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P + H     I D+  R+  + G  V    G D HG  I    + 
Sbjct: 39  EPFIFFEGPPSANGLPGVHHVLARAIKDIFPRYKTMKGFQVKRKAGWDTHGLPIELGVEK 98

Query: 65  AGVTTKVFVDQ-------NSRNFRDMADVLDISYD------------DFIRTTEKRHHDT 105
               TK  + +       N+   + +    DI  D            D   T E ++ ++
Sbjct: 99  ELGITKEDIGKKISVEDYNAACRKAVMRYTDIWNDLTQKMGYWVDMEDPYITYEPKYMES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
              L K+I +K  IYKG     YS +
Sbjct: 159 VWWLLKQIYNKELIYKGYTIQPYSPK 184


>gi|313888501|ref|ZP_07822168.1| leucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845530|gb|EFR32924.1| leucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 803

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++EK Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  SDKEKFYALVEFPYPSGQGLHVGHPRPYTALDIVSRMKRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +   +    N  +F+     +  S+D    I TT+  ++   + ++ ++  KG 
Sbjct: 89  YAIKNKIHPALVTKNNIAHFKKQLKSIGFSFDWSREINTTDPEYYKWTQWIFLQLYKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +   +++EV     G         V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPINWCPSCKVGLSNEEVV----GGKCERCGEEVVRRVKSQWMLKITEYADRLIE 204

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +        + ++   I   +
Sbjct: 205 DLDDLDFIDRVVTQQKNWIGRSE 227



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 121/393 (30%), Gaps = 56/393 (14%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G   K   +      +E    D ++        ++ Q    ++  E             
Sbjct: 388 DGLEVKDAIAKMIDYLEEHKLGDRKINYKLRDWVFSRQ----RYWGEPIPIVHCEKCGYV 443

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI--- 232
            L   E                           ++      G     +    M  W    
Sbjct: 444 ALPEEELPLLLPEVENYEPTDSGESPLAKMTDWVNTTCPKCGGPAKRETD-TMPQWAGSS 502

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y               ++W P D +  G +    H +Y   +         +   
Sbjct: 503 WYFLRYTDPHNDKALASKEALEYWTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTK 562

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K+      +    EK+SKS GNV++P +++ + G D LR + +      K   + +
Sbjct: 563 EPYQKRTSHGMILGGNNEKMSKSRGNVVNPDDIVRDYGADTLRCYEMFIGDFEKPVPWSE 622

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +G+K         G    + R  ++     DG         E  + +++   + ++++ E
Sbjct: 623 NGVK---------GCRRFLERVWNLQEIVVDG--------DEYSKELVTEIHKTIKKVTE 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +  N   + A+AQ+++L +E                     S +  +T E  R   ILL 
Sbjct: 666 DYANLKANTAIAQLMTLSNEF--------------------SDLGKITKEDFRTFLILLN 705

Query: 464 AFVPKLANKIFD--ILFVADENRCFQSLDQRLK 494
              P +  ++++   L      + +   ++ L 
Sbjct: 706 PVAPHITEELWEVCNLGGVLSEQTWPIFEEELT 738


>gi|317131687|ref|YP_004091001.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469666|gb|ADU26270.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 925

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 105/302 (34%), Gaps = 17/302 (5%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
            R+    ++ K   +++         G       Q +M VW D+   +            
Sbjct: 496 FRKEGADAWWKYSAEEILPGGTVCSCGGHAFAKEQDVMDVWFDSGVTHAAVLATRP---- 551

Query: 251 SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
                WPAD+++ G D     F +    +       P    +     +  +G K+SKSLG
Sbjct: 552 --DLHWPADIYLEGNDQYRGWFQSSLLTSIAWKGVAPYKMVITHGMVVDGEGRKMSKSLG 609

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N I P +++++ G D LR ++      G D     + LK+   +++   I N   R +  
Sbjct: 610 NGIAPGDIVKKFGADILRLWVASSDYQG-DVRVSDNILKQL--SEVYRKIRNTA-RYILG 665

Query: 369 ILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEV 424
              D+D         A    D+  +     + + +    ++   H     V +   V   
Sbjct: 666 NTSDFDPQKDAVAFDALLPIDKWAVWRLDELQKTVVTAYEHYEFHTIFHAVHNFCVVDMS 725

Query: 425 DRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           + Y D  K    ++K +         V   ++  L  L+   +   A +I+  L    E 
Sbjct: 726 NFYLDVLKDRLYVEKADSVSRRAAQTVIHRILDSLTRLVAPILVFTAEEIWQYLPHDAEQ 785

Query: 484 RC 485
             
Sbjct: 786 ES 787



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 15/162 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+G A   I+ D + R+  + G    +  G D HG  I + 
Sbjct: 47  EGKPLFVLHDGPPYANGDIHLGTAMNKILKDFIMRYKNMSGFKAPYVPGWDTHGLPIERK 106

Query: 62  -------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + F   +     +    L +   +    RT         
Sbjct: 107 AIDKVGLNRRSDDPAEFRGHCRDFALSHIEVMTEQFKRLGVIGDWKHPYRTLNPAFEARQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
             ++ +++ KG IYKG    ++   DE    + E+    D  
Sbjct: 167 IEVFGEMALKGYIYKGLKPVYWCPHDETALAEAEIEYAEDPC 208


>gi|116514487|ref|YP_813393.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274781|sp|Q049B7|SYL_LACDB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116093802|gb|ABJ58955.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 804

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV   +   +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRKMRQWMLKITAYADRLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSVG 226



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 74/452 (16%), Positives = 142/452 (31%), Gaps = 59/452 (13%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
            +G     A          F  +     +++ +  DIS + F                  
Sbjct: 328 TYGTGAVIAVPAHDERDYAFATKFDLPIKEVVEGGDISKEAF----AGDGVHVNSDFLNG 383

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + ++    K           E   N          Q Y  +  PV   E+          
Sbjct: 384 LHNEEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPED- 442

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                          LP E   +     +S L +L+      D   +        M  W 
Sbjct: 443 ----------ELPLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWA 492

Query: 233 ---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y+         D    K W P DL++ G +    H +Y   +         +
Sbjct: 493 GSSWYFLRYIDPHNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVV 552

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K +++ G IL   EK+SKS GNV++P +V++E G D+LR + +          
Sbjct: 553 PTKEPFQK-LYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLNASID 611

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +D +G          +G+   + R     + D D   IP+     ++D  +  + +  ++
Sbjct: 612 WDDNG---------PSGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVK 662

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + E+ +    + A++Q++  ++                        V  +  E      
Sbjct: 663 TVTEHFEELRFNTAISQMMVFMNAC--------------------QKVDKIPREYAEGFV 702

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            L+    P +  +I+ +    DE+  F +   
Sbjct: 703 KLMAPVAPHMMEEIWHVFG-HDESVQFAAWPT 733


>gi|326471987|gb|EGD95996.1| valyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 1059

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 111/357 (31%), Gaps = 48/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E     +    +    ++  +  + + K F     +    
Sbjct: 517 WCLSRQLWWGHQAPAYFVDIEGEKGDDADGNLWVTGRTEEEARAKAEKKFPGKKFVLKRD 576

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+           +P  +   G DIL F    +      +  
Sbjct: 577 PDVLDTWFSSGQWPYSTLGWPKKTH-DLENLYPVSILETGWDILFFWVARMIMLGIKMIG 635

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P  K+V+ H  I   +G K+SKSLGNV+DPI+V+                        
Sbjct: 636 QVPF-KEVYCHSLIRDSEGRKMSKSLGNVVDPIDVMNGISLQKLHDKLLEGNLAEKEVAI 694

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR+ L+     G D  +D   +         N I      
Sbjct: 695 ATKFQKKAFPKGIPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKF 752

Query: 365 SVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +  +  D+         G  + S+  IL   ++  +   E ++N+    A   +     
Sbjct: 753 VLGKLGDDFKPQATPSKTGKESLSERWILHKFNQAAKLTNEALENREFSVAANTIYQYWY 812

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  K       +P    +        +     L+   +P +  +++  L
Sbjct: 813 SQLCDVFIENSKSLLQPDADPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 869



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K +E  Y    I  PN     H+GHA    + D + R+ R+ G  VL+  G D  G    
Sbjct: 130 KVKEAGYFVIPIPPPNVTGALHMGHALTKALQDTMIRWQRMKGKTVLYLPGYDHAGISTQ 189

Query: 60  KAAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +     T                   +  +   +       L  S+D      T ++
Sbjct: 190 SVVEKILWKTEKKSRHDIGREAMVGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDE 249

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+G     + 
Sbjct: 250 NLSAAVTETFVRLHEEGTIYRGNRLVNWC 278


>gi|296127077|ref|YP_003634329.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018893|gb|ADG72130.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 853

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 5/173 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     IAD +AR++RL G D+L   G D  G     AA  
Sbjct: 31  KKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYRLLGYDILHPMGWDAFGMPAENAAIE 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +  +N  N ++  ++L  SY  D  + T    ++   +    K+ +KG +Y+ 
Sbjct: 91  HKTHPAEWTLKNIANMKEQLNLLGYSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                +         +++V         + +   V   + E ++ +++ Y ++
Sbjct: 151 GGDVNWCDHCNTVLANEQVTPEGTCWRCDGE---VTKKKLEQWYIKVTDYAEQ 200



 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 113/369 (30%), Gaps = 72/369 (19%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           Y+     +           PE  LPI     +      G   L  S    +         
Sbjct: 425 YWGNPLPFVHCEKCGIVPVPESELPITLP--MDIEFTVGDNPLKKSESFVNTTCPKCGGK 482

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA--------DLHVIGKDILRFHAIYWP 276
                  +D  T          +    K  F PA        D ++ G +    H +Y  
Sbjct: 483 AKRETDTMDTFTCSSWYYARYTDAHNDKMPFDPAIANAWLGVDQYIGGIEHACMHLLYSR 542

Query: 277 AFL--------LSANLPLP------------------KKVFSHGFILHKG---------- 300
            +         +  + P                    KK ++   + +K           
Sbjct: 543 FWYKFMRDIGLIKGDEPFNRLLTQGMVLANSYESRELKKFYTQEEMNNKAYEKDGIKKED 602

Query: 301 -----EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNAD 353
                EK+SKS  N IDP E+IE  G DA+R F++      KD  +  +G+K   R    
Sbjct: 603 IIVKMEKMSKSKANGIDPTEIIELFGADAVRIFVMFAAPPEKDKEWSDEGVKGSARFLNR 662

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHR 412
           + N              K +D    +  A     +++     + ++++  ++      + 
Sbjct: 663 IWNLFLKYKDEEAFKNNKSFDYNNLSKEA-----KNLYKKYHKTIKKVTIDIKDRFHFNT 717

Query: 413 ALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           A+A ++ L        +     +L   +         +  EVIR   ILL    P +  +
Sbjct: 718 AIAALMEL-------LNDMSSIKLNGDDE------YAMFKEVIRGYLILLNPIAPHITEE 764

Query: 473 IFDILFVAD 481
           ++ IL    
Sbjct: 765 LYQILNFGK 773


>gi|308233943|ref|ZP_07664680.1| leucyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943955|ref|ZP_08241420.1| leucine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491924|gb|EGF23698.1| leucine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 885

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K Y+     YP+   H+GHA    I DV+AR  R+ G DVL   G D  G     A
Sbjct: 39  KDCPKKYVLEMFPYPSGDLHMGHARNYTIGDVMARQARMRGFDVLHPMGFDAFGLPAENA 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         +   N          +  SYD      T +  ++   + ++ K+ +KG +
Sbjct: 99  AIKHHTEPSTWTYSNINQAISTMKRMGFSYDYQRMFNTCDPSYYTWGQWMFIKMWEKGLV 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+G     +    +    +++V  G             Q  +   ++F+++AY  +LL  
Sbjct: 159 YRGNSLVNWCPVCKTVLANEQVINGK----CWRCDTISQKKKLSQWYFKITAYAQELLDD 214

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++   +   +  +         G
Sbjct: 215 LDTLTGWPENVISQQRNWIGRSVG 238



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 108/314 (34%), Gaps = 37/314 (11%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK--------AKFW 256
           + L+ S++ ++        P   +   +D  T          +P  ++         +F 
Sbjct: 516 QTLADSKEFYETTCPKCGKPARRITDTMDTFTCSSWYFLRYCDPHNTELPFSKEAVERFM 575

Query: 257 PADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLG 308
           P D ++ G +    H +Y   +            + P    +         G+ +SKS G
Sbjct: 576 PVDNYIGGIEHAILHLLYSRFWTKVMRDLGLCSIDEPFTNLLCQGMVRDEHGDTMSKSKG 635

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD------GLKKRVNADLANGIGNLV 362
           NV+ P  VIE  G D LR  ++      KD  +D +         KR    LA       
Sbjct: 636 NVVPPSSVIEPFGADTLRLAILFIAPPEKDFDWDTEVVQGTNRFLKRAWR-LAWQFVFAA 694

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +        +  +      T +++ ++     +  +   +      + A++ ++ LV+
Sbjct: 695 RDAGLSTTIVPNDSVLEHTNLTHAEQELIRALHTLGLKCTRDFDKNQFNTAISAIMELVN 754

Query: 423 EVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              + + D  +                ++ + +   + +LL    P  A +I+   FV D
Sbjct: 755 AASKCFVDQHETLN------------PHLALRLAHDIVLLLAPVCPHWAEEIYQQAFV-D 801

Query: 482 ENRCFQSLDQRLKP 495
            ++ F S+     P
Sbjct: 802 TSKPFDSIYDASWP 815


>gi|255579057|ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
 gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase, putative [Ricinus communis]
          Length = 1065

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 82/431 (19%), Positives = 138/431 (32%), Gaps = 93/431 (21%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL---K 205
             +  +  V+ M +  +F   S    + L          L      + ++  K  L   +
Sbjct: 453 CCSRSNEVVEPMIKPQWFVNCSTMAKQALDAAFDGENPKL-EFFPKQYLADWKRWLENIR 511

Query: 206 DLSLSRKTFD------WGIKIPDDPQY--------------------------------- 226
           D  +SR+ +       W I + DD                                    
Sbjct: 512 DWCISRQLWWGHRIPAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFAGKKFEM 571

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +    L+  G+ D+ D  K  F+P  +   G DIL F    +      
Sbjct: 572 SQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKT-FYPTSVLETGHDILFFWVARMVMLGIT 630

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L  ++P  K           G K+SKSLGNVIDP+EVI  + ++ L   L        + 
Sbjct: 631 LRGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGINLEGLHKRLEEGNLDPNEL 690

Query: 340 FYDKDGLKK--------------------------RVNADL-----ANGIGNLVSRSVSM 368
              KDG KK                          ++N D+          N +  +V  
Sbjct: 691 VTAKDGQKKDFPNGIAECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRF 750

Query: 369 ILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
            +   D     P      A   S + ILS  ++ +      M +     A + V S    
Sbjct: 751 AMSKLDADYSPPLTLHTEALPFSCKWILSALNKAIARTVSAMNSYEFSDAASTVYSWWQY 810

Query: 423 -EVDRYFDAQKPWELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              D + +A KP      NP+ A   +         +     LL  F+P +  +++  L 
Sbjct: 811 QFCDVFIEAIKP-YFVGDNPEYASAKNAAQGTLWVCLDNGLRLLHPFMPFVTEELWQRLP 869

Query: 479 VADENRCFQSL 489
            A ++    S+
Sbjct: 870 SARDHTRKDSI 880



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA    + D + R+ R+ G + L+  G D  G      
Sbjct: 123 SSKPPFTIVFPPPNVTGALHIGHALTAAVEDTIIRWRRMSGYNTLWVPGVDHAGIATQVV 182

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + ++           L  S D      T +++ 
Sbjct: 183 VEKKLMRERHLTRHDIGREQFVSEVWKWKEEYGGTILGQLRRLGASLDWSRECFTMDEKR 242

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +D EV  
Sbjct: 243 SKAVIEEFVRLYKEGLIYRDLRLVNWDCTLRTAISDIEVDY 283


>gi|224418274|ref|ZP_03656280.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827598|ref|ZP_04870483.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511004|gb|EES89663.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 812

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K YI +   YP+   H+GH     I+D +AR  R  G +VL   G D  G     A
Sbjct: 28  KSLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARNLRKQGYNVLHPIGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  + +     L  S+     + T +  +    ++L+ ++ +KG I
Sbjct: 88  AIKNKTHPKQWTYSNIEHMKKQLYSLGFSFSKTRELATCDLEYSKWEQLLFIEMWEKGLI 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +G            V   E   Y+ +++ Y ++LL  
Sbjct: 148 YRKKGYLNWCPNDQTVLANEQVIEGK----CWRCDTQVIQKEMYQYYIKITDYAEELLQD 203

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ES   ++   +            GL
Sbjct: 204 LESLEGKWPNQVLTMQRNWIGKSQGL 229



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/367 (14%), Positives = 109/367 (29%), Gaps = 51/367 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY--YESHPEFILPIERRNEVISFV 200
            G   Q Y     P+   E+ G            L            L      +     
Sbjct: 420 WGVSRQRYWGTPIPLIHCEKCGILPESKENLPVALPEDVVIDGEGNPLDKHSTWKHCVCP 479

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K G K L  +            D       +    T        +      +  +   D 
Sbjct: 480 KCGQKALRETDTL---------DTFVESSWYFLRYTTPQQLRDKMPISPEDEKYWMSVDE 530

Query: 261 HVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           +V G +    H +Y   F            + P    + + G +  +G K+SKS GNV+D
Sbjct: 531 YVGGIEHAILHLLYSRFFTKVLRDLGYTHISEPF-SHLLTQGMVTKEGAKMSKSKGNVVD 589

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGNLVSRSVSMIL 370
           P E+I   G D  R F++      ++  ++   L+   R    L   I N+   S+ M+ 
Sbjct: 590 PQEIINTYGADTARLFILFAAPPVRELEWNDSALEGSFRFIKRLCAKIENV--DSIQMLP 647

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQVISLVSEVDRY 427
           K            +++++         L++  E          +  +A  +  ++ +   
Sbjct: 648 K------IDTSKLSKAEKYARKKVYEALKKSNETFVHENGYAFNTLIAACMEAINAL--- 698

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
                       +      +      ++  +   L+  +P +  ++    F     +   
Sbjct: 699 ------------SEQENREIWSEGYFILLNI---LEPIIPHICWELSQQYFGLKNFQVIA 743

Query: 488 SLDQRLK 494
             ++ LK
Sbjct: 744 VDNEALK 750


>gi|225455479|ref|XP_002275092.1| PREDICTED: similar to T5E21.11 [Vitis vinifera]
          Length = 817

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 130/384 (33%), Gaps = 49/384 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +     N   W      ++    ++           +        +  +         + 
Sbjct: 254 WKRWLENIRDWCVSRQLWW---GHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIE 310

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            SR       +I  DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL
Sbjct: 311 ASRMFPGKNFQISQDPD-VLDTWFSSGLFPLTVLGWPDDTQDLKA-FYPTSVLETGHDIL 368

Query: 269 RFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            F    +      L  ++P  K           G K+SKSLGNVIDP+EVI  + ++ L 
Sbjct: 369 FFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLH 428

Query: 327 YFLVREIACGKDGFYDKDGLKK--------------------------RVNAD------- 353
             L        +    K+G  K                          R+N D       
Sbjct: 429 KRLEEGNLDPSELVVAKEGQVKDFPNGIAECGADALRFALVTYTAQSDRINLDIQRVVGY 488

Query: 354 --LANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
               N + N +  ++S +  DY   +   P     + + ILSV ++ + +   +M +   
Sbjct: 489 RQWCNKLWNAIRFAMSKLGDDYTPPMEIVPDVMPFTCQWILSVLNKAISKTVSSMDSYEF 548

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAF 465
             A + V S       D + +  KP+     +P  AS            +     LL  F
Sbjct: 549 ADAASTVYSWWQFQLCDVFIEVVKPF-FSSNDPKFASARRFAQDTLWVCLDNGLRLLHPF 607

Query: 466 VPKLANKIFDILFVADENRCFQSL 489
           +P +  +++  L  A +    +S+
Sbjct: 608 MPFVTEELWQRLPPARDCARKESI 631


>gi|222625608|gb|EEE59740.1| hypothetical protein OsJ_12199 [Oryza sativa Japonica Group]
          Length = 1061

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 129/385 (33%), Gaps = 47/385 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +  +  +Y    N   W      ++    ++           +  +        I   
Sbjct: 497 IPQQYEQDWYRWLANIRDWCISRQLWW---GHRVPAWYVILEDDQEKILGSANGRWIVAR 553

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                +L   +K      ++  DP  ++  W  +    LT  G+ D+    KA F+P  +
Sbjct: 554 NESEANLEAQQKYPGKKFELHQDPD-VLDTWFSSGLFPLTVLGWPDDTADLKA-FYPGSV 611

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DI+ F    +      L  ++P  K           G K+SKSLGNVIDP++VI 
Sbjct: 612 LETGHDIIFFWVARMVMMGMQLGGDVPFEKVYLHPMIRDAHGRKMSKSLGNVIDPVDVIN 671

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKK--------------------------RVNA 352
            + +D L   L        +     +G KK                          ++N 
Sbjct: 672 GISLDGLLKRLKEGNLDPNELNIATEGKKKDFPDGIAECGTDALRFALVSYTSQSDKINL 731

Query: 353 DL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIR 402
           D+          N +  ++   +         P   +        + ILSV ++ + +  
Sbjct: 732 DIKRVVGYRQWCNKLWNAIRFAMGKLGNHYTPPATISVTTMPPICKWILSVLNKAIGKTV 791

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV-IRQL 458
            +++      A + + S       D + +A KP+    +   + A       + V +   
Sbjct: 792 TSLEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQEFESARAASRDALWVCLDTG 851

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             LL  F+P +  +++  L    ++
Sbjct: 852 LRLLHPFMPYVTEELWQRLPQPKDS 876



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 50/168 (29%), Gaps = 19/168 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 121 SSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWRRMSGYNTLWVPGVDHAGIATQVV 180

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + D+      +    L  S D      T +K  
Sbjct: 181 VEKKLMRERNLTRHDIGREEFVSEVLKWKDEYGGTILNQLRRLGASLDWSRECFTMDKPR 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
                  + ++  +G IY+      +        +D EV +      Y
Sbjct: 241 SKAVTEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVEVVETFYCVDY 288


>gi|254391604|ref|ZP_05006803.1| isoleucyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294812122|ref|ZP_06770765.1| Putative isoleucyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
 gi|326440721|ref|ZP_08215455.1| isoleucyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705290|gb|EDY51102.1| isoleucyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324721|gb|EFG06364.1| Putative isoleucyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
          Length = 1047

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 137/413 (33%), Gaps = 14/413 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y         L +E    +        G++ +  +N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTVIKDRLIEENERTNWFPDSVKHGRFGDWLNNNVDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         ++  L+   S  E      R    +   +  + D++ +       
Sbjct: 455 SRNRYWGTPLPVWRCEENHLTCVGSRAELSELTGRDQSALDPHRPFIDDVTFACPHEGCA 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           +     P+ ++  W D+ +      GY         K +PA       D     F+ +  
Sbjct: 515 LTAVRVPE-VIDAWYDSGSMPFAQYGYPYKNKELFEKRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++      +      P     T SD  +LS 
Sbjct: 634 WSARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSPADPAPADRTVSDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++ ++ + M+     RA   + S V ++  ++  +      + +     T      E
Sbjct: 694 LNALVDQVTQAMEAYDTQRAGKLLSSFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V+  +  L+    P +  +++  L V        S+     P   L    DP+
Sbjct: 750 VVETVTRLMAPLTPFITERVWQDLVVPVTPDAPPSVHLAGWPEADLSA-IDPV 801



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT E  +
Sbjct: 100 VEKELGFSGKKDIEAYGIAEFNARCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMEPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I DKG + +      +  R     +D E+ +G +
Sbjct: 160 IDSVWWSLKQIFDKGLLVQDHRVSPWCPRCGTGLSDHELAQGYE 203


>gi|317496419|ref|ZP_07954771.1| leucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913434|gb|EFV34928.1| leucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 809

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+    H+GH       D+L+R+ R +G +VL   G D  G    + 
Sbjct: 29  TKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN   FR     L  SY  D  + TT+  ++   + ++KK+ +KG  
Sbjct: 89  ALDTGNDPREFTKQNIDTFRRQIKELGFSYDWDREVNTTDPNYYKWTQWIFKKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +        +++EV  G          +PV+      +  +++ Y ++LL  
Sbjct: 149 YVDEVPVNWCPALGTVLSNEEVIDGKS----ERGGHPVERRPMRQWVLKITDYAEQLLQD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDILDW 210



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 110/286 (38%), Gaps = 53/286 (18%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K+W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNDKMFADPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGE-----KISKSLGNVIDPIEVIEEVGVDALRYFL 329
                + +  P  K +F+ G IL +G+     K+SKS GNV++P ++I   G D LR + 
Sbjct: 549 YDLGLVPSREPFQK-LFNQGMILAEGKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVYE 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          + ++GL         +G    + R   + + D +          + +  
Sbjct: 608 MFMGPLDASIAWSENGL---------DGSRRFLDRVYRLFV-DEETGKVNDKVLDKDNAE 657

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTV 447
           +    +  ++++ E+++    + A++Q++  V++  +  Y     P +            
Sbjct: 658 LEVSYNYTVKKVSEDIEILGFNTAISQLMVFVNDCYKAEYI----PRKYALG-------- 705

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQ 491
                        LL  F P LA ++++I    +      + + D+
Sbjct: 706 ----------FIQLLAPFAPHLAEEMWEIYGNTESVSYVAWPTFDE 741


>gi|294506941|ref|YP_003570999.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343269|emb|CBH24047.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 863

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++E+ Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 31  DQEEFYVLDMFPYPSGSGLHVGHPEGYTATDIVARYKRKQGFNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       +   ++N   F+     L  SYD    I TT+  ++   + ++ ++ +KG  
Sbjct: 91  ALKTNTHPRETTEKNIAQFKRQLKRLGFSYDWQREINTTDPDYYKWTQWIFLQLYEKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+     W+         ++EV  G           P + +    +  +++ Y D+LL  
Sbjct: 151 YQSEEPVWWCEELGTVLANEEVIDGKS----ERGGYPCERVPMRQWVLKITEYADRLLEG 206

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E+        E +   I   +
Sbjct: 207 LEALDWPESTKEMQRNWIGRSE 228



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 75/178 (42%), Gaps = 31/178 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI+P +V++E G D LR + +      +D  +  D ++         G+  
Sbjct: 634 HKMSKSRGNVINPDDVVDEYGADTLRLYEMFMGPLEQDKPWSTDDME---------GVHR 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   +++           +  E D   L    R ++++ E+++ +  + A+A ++  
Sbjct: 685 FLNRIWRLVVDA--DSGGLAVSDEEPDREQLRTLHRTIKKVTEDIEARDFNTAIAAMMEF 742

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+  +++                      +  +V     +LL  F P LA +++  L 
Sbjct: 743 VNAANKW--------------------DALPRQVATPFVLLLSPFAPHLAEELWARLG 780


>gi|313124236|ref|YP_004034495.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280799|gb|ADQ61518.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325685746|gb|EGD27823.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 804

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDKNIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV   +   +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRKMRQWMLKITAYADRLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSVG 226



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 75/452 (16%), Positives = 144/452 (31%), Gaps = 59/452 (13%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
            +G     A          F  + +   +++ +  DIS + F+                 
Sbjct: 328 TYGTGAVMAVPAHDERDYAFATKFNLPIKEVVEGGDISKEAFVG----DGVHVNSDFLNG 383

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + ++    K           E   N          Q Y  +  PV   E+          
Sbjct: 384 LHNEEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPED- 442

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                          LP E   +     +S L +L+      D   +        M  W 
Sbjct: 443 ----------ELPLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWA 492

Query: 233 ---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y+         D    K W P DL++ G +    H +Y   +         +
Sbjct: 493 GSSWYFLRYIDPHNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVV 552

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K +++ G IL   EK+SKS GNV++P +VI+E G D+LR + +          
Sbjct: 553 PTKEPFQK-LYNQGLILKNHEKMSKSRGNVVNPDDVIDEYGADSLRTYEMFMGPLNASID 611

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +D +G          +G+   + R     + D D   IP+     ++D  +  + +  ++
Sbjct: 612 WDDNG---------PSGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVK 662

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + E+ +    + A++Q++  ++                        V  +  E      
Sbjct: 663 TVTEHFEELRFNTAISQMMVFMNAC--------------------QKVDKIPREYAEGFV 702

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            L+    P +  +I+ +    DE+  F +   
Sbjct: 703 KLMAPVAPHMMEEIWHVFG-HDESVQFAAWPT 733


>gi|225621162|ref|YP_002722420.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782486|sp|C0QWR3|SYL_BRAHW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225215982|gb|ACN84716.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 853

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 6/250 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     IAD +AR+++L G D+L   G D  G     AA  
Sbjct: 31  KKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYKLLGYDILHPMGWDAFGMPAENAAIE 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +  +N  N +D  ++L  SY  D  + T    ++   +    K+ +KG +Y+ 
Sbjct: 91  HKTHPAEWTLKNIANMKDQLNLLGYSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V         + +   V   + E ++ +++ Y ++L +  + 
Sbjct: 151 GGDVNWCDHCNTVLANEQVTPEGTCWRCDGE---VTKKKLEQWYIKVTDYAEQLDADLKL 207

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             E   P        +++   +               I       +Y        +    
Sbjct: 208 -LEGYWPDNVIAMQKNWIGRSVGAYINFNLDDGKAFPIFTTRPDTIYGVTYMAIAWNYDG 266

Query: 243 GYLDNPDGSK 252
                    K
Sbjct: 267 LLDMCTTEQK 276



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 32/204 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP E+IE  G DA+R F++      KD  +  +G+K             
Sbjct: 608 EKMSKSKANGIDPAEIIELFGADAVRIFVMFVAPPEKDKEWSDEGVKGS---------SR 658

Query: 361 LVSRSVSMILKDYDGMIPTPGA------FTESDESILSVCSRVLQEIRENM-QNQLIHRA 413
            ++R  ++ LK  D      G        ++  + +    ++ ++++  ++      + A
Sbjct: 659 FLNRIWNLFLKYKDEEAFKNGKSFDYNNLSKEGQKLFRKYNKTIKKVTIDIKDRFHFNTA 718

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A ++ L        +     +L   +         +  EVIR   ILL    P +  ++
Sbjct: 719 IAALMEL-------LNDMSVIKLANNDD------YAMFKEVIRGYLILLNPIAPHMTEEL 765

Query: 474 FDILFVAD---ENRCFQSLDQRLK 494
           + IL       E R  +  +Q  K
Sbjct: 766 YQILNFGKMILEERWVEHDEQYCK 789


>gi|114777695|ref|ZP_01452655.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
 gi|114551911|gb|EAU54445.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
          Length = 936

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/297 (20%), Positives = 106/297 (35%), Gaps = 23/297 (7%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           I F       L       D G         I+ VW D+ + +             +    
Sbjct: 530 IWFAHDAAHFLPDGATCPDCGGNAFARETDILDVWFDSGSTHACVLE------QREELTS 583

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PADL++ G D     F +    +       P    +     +   G K+SKS GNVI P 
Sbjct: 584 PADLYLEGSDQHRGWFQSSLLESVGTRGRAPFKGVLTHGFVVDKNGNKMSKSKGNVIAPQ 643

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           ++I+++G D LR ++        D     D +K+   A         +  ++  +L + D
Sbjct: 644 KIIQQMGADILRLWIASSDYSA-DIRISDDIIKQLSEA------YRRIRNTIRFLLGNLD 696

Query: 375 GMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRY 427
           G  P   A      T  D+ ++   SR+ + +    ++   HR   ++ +   V     Y
Sbjct: 697 GFDPAHDAVALSERTPLDQWVMHRLSRLERHVHACNESYQFHRIHQEIHNFCSVDLGGFY 756

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D  K        +  R  +      ++   L  L+   +P  A + +D L  +DE 
Sbjct: 757 LDMIKDRLYCDGADSARRRSARATLYDLADTLTRLIAPLLPFTAEEAWDHLPGSDEK 813



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 19/151 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+  K  +     Y N   HIGHA   ++ D++ R   + G D  +  G D HG  I   
Sbjct: 62  KDAPKFILHDGPPYANGSIHIGHALNKVLKDIVIRSRSMLGFDAPYVPGWDCHGLPIELK 121

Query: 62  ----------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
                                   + +        R+    L +   +D    T + R  
Sbjct: 122 VEEQFKKKKQKKEDISDAEFRSACRDYAKGQIDVQREEFKRLGVIGDWDHPYVTMDYRFE 181

Query: 104 D-TCRILWKKISDKGDIYKGCYSGWYSLRDE 133
             T R + + + + G         W      
Sbjct: 182 ANTVREIGRFLENGGLFKGAKPVHWCVSCAT 212


>gi|86150800|ref|ZP_01069016.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841970|gb|EAQ59216.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 809

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +  +D+    +++V  G          + V   +  GY+ +++AY ++LL   E 
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEK 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|317179745|dbj|BAJ57533.1| leucyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 806

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F   D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNHLKYFMSVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S+I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLCDKASVINPTTSKPEFKEVSLNEAEKLGRKKVYEALKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYSFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|104774389|ref|YP_619369.1| leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|123251849|sp|Q1G971|SYL_LACDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|103423470|emb|CAI98369.1| Leucyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 804

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV   +   +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRKMRQWMLKITAYADRLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSVG 226



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 74/452 (16%), Positives = 142/452 (31%), Gaps = 59/452 (13%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
            +G     A          F  +     +++ +  DIS + F                  
Sbjct: 328 TYGTGAVMAVPAHDERDYAFATKFDLPIKEVVEGGDISKEAF----AGDGVHVNSDFLNG 383

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + ++    K           E   N          Q Y  +  PV   E+          
Sbjct: 384 LHNEEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPED- 442

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                          LP E   +     +S L +L+      D   +        M  W 
Sbjct: 443 ----------ELPLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWA 492

Query: 233 ---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y+         D    K W P DL++ G +    H +Y   +         +
Sbjct: 493 GSSWYFLRYIDPHNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVV 552

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K +++ G IL   EK+SKS GNV++P +V++E G D+LR + +          
Sbjct: 553 PTKEPFQK-LYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLNASID 611

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +D +G          +G+   + R     + D D   IP+     ++D  +  + +  ++
Sbjct: 612 WDDNG---------PSGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVK 662

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + E+ +    + A++Q++  ++                        V  +  E      
Sbjct: 663 TVTEHFEELRFNTAISQMMVFMNAC--------------------QKVDKIPREYAEGFV 702

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            L+    P +  +I+ +    DE+  F +   
Sbjct: 703 KLMAPVAPHMMEEIWHVFG-HDESVQFAAWPT 733


>gi|83816700|ref|YP_445066.1| leucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|123753431|sp|Q2S415|SYL_SALRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83758094|gb|ABC46207.1| leucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 863

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++E+ Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 31  DQEEFYVLDMFPYPSGSGLHVGHPEGYTATDIVARYKRKQGFNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       +   ++N   F+     L  SYD    I TT+  ++   + ++ ++ +KG  
Sbjct: 91  ALKTNTHPRETTEKNIAQFKRQLKRLGFSYDWQREINTTDPDYYKWTQWIFLQLYEKGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+     W+         ++EV  G           P + +    +  +++ Y D+LL  
Sbjct: 151 YQSEEPVWWCEELGTVLANEEVIDGKS----ERGGYPCERVPMRQWVLKITEYADRLLEG 206

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 207 LEDLDWPESTKEMQRNWIGRSE 228



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 31/178 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNVI+P +V++E G D LR + +      +D  +  D ++         G+  
Sbjct: 634 HKMSKSRGNVINPDDVVDEYGADTLRLYEMFMGPLEQDKPWSTDDME---------GVHR 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R   +++           +  E D   L    R ++ + E+++ +  + A+A ++  
Sbjct: 685 FLNRIWRLVVDA--DSGGLAVSDEEPDREQLRTLHRTIKTVTEDIEARDFNTAIAAMMEF 742

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+  +++                      +  +V     +LL  F P LA +++  L 
Sbjct: 743 VNAANKW--------------------DALPRQVATPFVLLLSPFAPHLAEELWARLG 780


>gi|300811526|ref|ZP_07092017.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497493|gb|EFK32524.1| leucine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 804

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  EKPKYYVLDMFPYPSGKGLHVGHPEGYTATDIMARMKRAQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F D+N  +F+     L  SY  D  I+TT+  ++   + +++++   G  
Sbjct: 88  ALQTGNDPATFTDENIAHFKKQLQALGFSYDWDREIKTTDPNYYKWTQWIFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV   +   +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRKMRQWMLKITAYADRLLDD 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSVG 226



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 74/452 (16%), Positives = 142/452 (31%), Gaps = 59/452 (13%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
            +G     A          F  +     +++ +  DIS + F                  
Sbjct: 328 TYGTGAVMAVPAHDERDYAFATKFDLPIKEVVEGGDISKEAF----AGDGVHVNSGFLNG 383

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           + ++    K           E   N          Q Y  +  PV   E+          
Sbjct: 384 LHNEEAKAKMVDWLTEKGVGEKKVNYKMRDWNFSRQRYWGEPIPVIHWEDGETTLVPED- 442

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
                          LP E   +     +S L +L+      D   +        M  W 
Sbjct: 443 ----------ELPLRLPKESNIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPQWA 492

Query: 233 ---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
                   Y+         D    K W P DL++ G +    H +Y   +         +
Sbjct: 493 GSSWYFLRYIDPHNDKALADPELLKKWMPVDLYIGGAEHATLHLLYARFWHKVLYDLGVV 552

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K +++ G IL   EK+SKS GNV++P +V++E G D+LR + +          
Sbjct: 553 PTKEPFQK-LYNQGLILKNHEKMSKSRGNVVNPDDVVDEYGADSLRTYEMFMGPLNASID 611

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQ 399
           +D +G          +G+   + R     + D D   IP+     ++D  +  + +  ++
Sbjct: 612 WDDNG---------PSGVKKFLDRVWRTFVNDLDLDPIPSEKITDKNDGKLDKIYNETVK 662

Query: 400 EIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            + E+ +    + A++Q++  ++                        V  +  E      
Sbjct: 663 TVTEHFEELHFNTAISQMMVFMNAC--------------------QKVDKIPREYAEGFV 702

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            L+    P +  +I+ +    DE+  F +   
Sbjct: 703 KLMAPVAPHMMEEIWHVFG-HDESVQFAAWPT 733


>gi|289675763|ref|ZP_06496653.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 313

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++  Y  +   YP+ + H+GH     I DV++R+ R+ G +VL   G D  G     AA
Sbjct: 31  GKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLGKNVLQPLGWDAFGMPAENAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  V    +  +N    R     L ++ D    + T +  ++   + L+ ++ +KG IY
Sbjct: 91  IDNNVAPAKWTYENIDYMRTQLKSLGLAVDWSREVTTCKPDYYRWEQWLFTRLFEKGVIY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            ++  E   Y+F+++AY D+LL   
Sbjct: 151 RKNGTVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITAYADELLESL 206

Query: 181 ESHPEFILPIERRNEVISFVKSGL 204
           +  P +   ++           G+
Sbjct: 207 DELPGWPEQVKTMQRNWIGRSRGM 230


>gi|225390123|ref|ZP_03759847.1| hypothetical protein CLOSTASPAR_03873 [Clostridium asparagiforme
           DSM 15981]
 gi|225043815|gb|EEG54061.1| hypothetical protein CLOSTASPAR_03873 [Clostridium asparagiforme
           DSM 15981]
          Length = 1044

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 113/351 (32%), Gaps = 8/351 (2%)

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
            G++ +   N   W      ++      ++ +    +       L     N         
Sbjct: 435 KGRFGDWLENIQDWGLSRNRYWGTPLNIWECECGHQHSIGSIEELKSMSDNCPEEIELHR 494

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
               +++      G ++   P+ ++  W D+         Y           +PA     
Sbjct: 495 PYIDAVTITCPHCGKQMKRVPE-VIDCWFDSGAMPFAQHHYPFENKELFESQFPAQFISE 553

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
             D     F+++   + LL    P    V     +   G+K+SKS GN +DP + ++  G
Sbjct: 554 AVDQTRGWFYSLLAESTLLFNKSPYENVVVMGLVLDENGQKMSKSKGNAVDPFDTLKAHG 613

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-- 379
            DA+R+F     A      Y    + +     +           +   +  ++ M  T  
Sbjct: 614 ADAIRWFFYTCSAPWLPKRYQDKAVTEGQRKFMGTLWNTYAFWVLYANIDRFNAMDYTLE 673

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK 438
                  D+ +LS  + +++ +  N+ N +I  A   +   V ++ + Y    +     K
Sbjct: 674 YDKLAVMDKWLLSKMNSMVKTVDSNLDNYMIPEAARALQEFVDDMSNWYVRRSRDRFWAK 733

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                           +  +A      +P +  +I+  L    +    +S+
Sbjct: 734 GMEQDKINAYMTLYTALVTVAKAAAPMIPFMTEQIYQNLVRKIDPSALESV 784



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 60/166 (36%), Gaps = 20/166 (12%)

Query: 1   MKEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  K Y+        N +PHIGH    +I D++ R+  + G  V    G D HG  + 
Sbjct: 34  MREGCKPYVFYDGPPTANGKPHIGHVETRVIKDMIPRYRAMKGYMVPRKAGWDTHGLPVE 93

Query: 60  KAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEK 100
              +                       K  V +    + D ++ +      DD   T + 
Sbjct: 94  LEVEKKLGLDGKEQIEQYGLEPFIQECKKSVWKYKGMWEDFSNTVGFWADMDDPYVTYDN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++     K+I DKG +YKG     Y  R     +  EV +G  
Sbjct: 154 NFIESEWWALKQIWDKGLLYKGFKVVPYCPRCGTPLSSHEVAQGYK 199


>gi|313141807|ref|ZP_07804000.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130838|gb|EFR48455.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 813

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K YI +   YP+   H+GH     I+D +AR  R  G +VL   G D  G     A
Sbjct: 29  KSLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARNLRKQGYNVLHPIGWDAFGMPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  + +     L  S+     + T +  +    ++L+ ++ +KG I
Sbjct: 89  AIKNKTHPKQWTYSNIEHMKKQLYSLGFSFSKTRELATCDLEYSKWEQLLFIEMWEKGLI 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +G            V   E   Y+ +++ Y ++LL  
Sbjct: 149 YRKKGYLNWCPNDQTVLANEQVIEGK----CWRCDTQVIQKEMYQYYIKITDYAEELLQD 204

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ES   ++   +            GL
Sbjct: 205 LESLEGKWPNQVLTMQRNWIGKSQGL 230



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/367 (14%), Positives = 109/367 (29%), Gaps = 51/367 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY--YESHPEFILPIERRNEVISFV 200
            G   Q Y     P+   E+ G            L            L      +     
Sbjct: 421 WGVSRQRYWGTPIPLIHCEKCGILPESKENLPVALPEDVVIDGEGNPLDKHSTWKHCVCP 480

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K G K L  +            D       +    T        +      +  +   D 
Sbjct: 481 KCGQKALRETDTL---------DTFVESSWYFLRYTTPQQLRDKMPISPEDEKYWMSVDE 531

Query: 261 HVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           +V G +    H +Y   F            + P    + + G +  +G K+SKS GNV+D
Sbjct: 532 YVGGIEHAILHLLYSRFFTKVLRDLGYTHISEPF-SHLLTQGMVTKEGAKMSKSKGNVVD 590

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANGIGNLVSRSVSMIL 370
           P E+I   G D  R F++      ++  ++   L+   R    L   I N+   S+ M+ 
Sbjct: 591 PQEIINTYGADTARLFILFAAPPVRELEWNDSALEGSFRFIKRLCAKIENV--DSIQMLP 648

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQVISLVSEVDRY 427
           K            +++++         L++  E          +  +A  +  ++ +   
Sbjct: 649 K------IDTSKLSKAEKYARKKVYEALKKSNETFVHENGYAFNTLIAACMEAINAL--- 699

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
                       +      +      ++  +   L+  +P +  ++    F     +   
Sbjct: 700 ------------SEQENREIWSEGYFILLNI---LEPIIPHICWELSQQYFGLKNFQVIA 744

Query: 488 SLDQRLK 494
             ++ LK
Sbjct: 745 VDNEALK 751


>gi|293115466|ref|ZP_05791600.2| isoleucine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809808|gb|EFF69013.1| isoleucine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 1075

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 88/268 (32%), Gaps = 5/268 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+         Y           +PAD      D     F+++   + LL    
Sbjct: 549 VIDCWFDSGAMPFAQHHYPFENKDLFEAQFPADFISEAVDQTRGWFYSLLAESTLLFNKA 608

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +         G+K+SKS GN +DP + ++  G DA+R++     A      +   
Sbjct: 609 PYRNVIVLGHVQDENGQKMSKSKGNAVDPFDALQTHGADAIRWYFYSNSAPWLPNRFYDK 668

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
            + +     L           +   + ++D           +  D+ ILS  + +++ + 
Sbjct: 669 AVTEGQRKFLGTIWNTYAFFVLYANIDNFDATKYKLEYDKLSVMDKWILSKVNSLVKSVD 728

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             + +  I      +   V ++ + Y    +     K                +  L  +
Sbjct: 729 AYLNDYKIPETTRVLEEFVDDLSNWYVRRSRERFWAKGMEQDKINAYMTLYTSLVTLCKV 788

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489
               +P +  +I+  +    +    +S+
Sbjct: 789 AAPMIPFMTEEIYLNIVAGIDKTAPESI 816



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 51/161 (31%), Gaps = 19/161 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
                       N +PHIGH    +I D++ R+  + G  V    G D HG  +    + 
Sbjct: 63  PTYTFYDGPPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELEVEK 122

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 K  V +    + D +  +      D+   T      ++
Sbjct: 123 MLGLDGKEQIEKYGLEPFIEHCKESVWKYKGMWEDFSGTVGFWADMDNPYVTYHNDFIES 182

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                K+I +K  +YKG     Y  R     +  EV +G  
Sbjct: 183 EWWALKEIWNKKLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 223


>gi|330805567|ref|XP_003290752.1| hypothetical protein DICPUDRAFT_49396 [Dictyostelium purpureum]
 gi|325079102|gb|EGC32719.1| hypothetical protein DICPUDRAFT_49396 [Dictyostelium purpureum]
          Length = 1072

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/364 (16%), Positives = 109/364 (29%), Gaps = 53/364 (14%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG----I 218
           + +      +    +  Y    + +              +  +    + + F       +
Sbjct: 525 KDWCVSRQLWWGHRIPAYHVSIKGVRSNPYDTNQWVVGMNQEEARKNATEKFKCSDEDIV 584

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            I  DP  ++  W  +     +  G+ D  +     F+P  L   G DIL F    +   
Sbjct: 585 SIEQDPD-VLDTWFSSGLFPFSVMGWPDQTE-DMMNFYPTSLLETGSDILFFWVARMVMM 642

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------ 318
              L+  LP              G K+SKSLGNVIDP +VI+                  
Sbjct: 643 GQQLTGKLPFDTVFLHSMVRDAHGRKMSKSLGNVIDPNDVIKGVSLDGLIEKLYEGNLDP 702

Query: 319 -------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
                              E G DA+R+ L    + G+D   D   +      +  N I 
Sbjct: 703 KEVEKASAGVKQDFPNGIAECGTDAMRFALCAYTSQGRDINLDIQRVVA--YRNFCNKIW 760

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N    +   +   +                 +  IL+   R +++  E   +    +A  
Sbjct: 761 NATRFAHMKLESLFKPSAFDAQELLKDTNAINIWILNAAQRAIKDANEGFDSYDFSKATT 820

Query: 416 QVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +       D Y +  K     + +              I     L+  F+P L+ ++
Sbjct: 821 AVYNFWLSELCDVYLEMTKSIFSIEEDAPIKQKTKETLYTCIDIGLRLIHPFMPFLSEEL 880

Query: 474 FDIL 477
           +  L
Sbjct: 881 YQSL 884



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 20/162 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           MK++ K  I           H+GHA    I D + R+ R+ G   L+  GTD  G     
Sbjct: 141 MKDK-KFIIVIPPPNVTGSLHLGHALTNSIQDAVVRYRRMKGEVCLWVPGTDHAGIATQV 199

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         +  +     ++    +  SYD    + T ++ 
Sbjct: 200 VVEKKLWKDSKITRHDLGREEFIKKVWEWKSEYGTRIQNQLKKMASSYDWKREVFTMDEP 259

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                   + ++ + G I++      +S   +   +D EV  
Sbjct: 260 RSRAVNTAFIRMFNDGLIFRTTRLVNWSCALKTAISDIEVDF 301


>gi|297741117|emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 130/384 (33%), Gaps = 49/384 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           +     N   W      ++    ++           +        +  +         + 
Sbjct: 543 WKRWLENIRDWCVSRQLWW---GHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIE 599

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            SR       +I  DP  ++  W  +    LT  G+ D+    KA F+P  +   G DIL
Sbjct: 600 ASRMFPGKNFQISQDPD-VLDTWFSSGLFPLTVLGWPDDTQDLKA-FYPTSVLETGHDIL 657

Query: 269 RFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
            F    +      L  ++P  K           G K+SKSLGNVIDP+EVI  + ++ L 
Sbjct: 658 FFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLH 717

Query: 327 YFLVREIACGKDGFYDKDGLKK--------------------------RVNAD------- 353
             L        +    K+G  K                          R+N D       
Sbjct: 718 KRLEEGNLDPSELVVAKEGQVKDFPNGIAECGADALRFALVTYTAQSDRINLDIQRVVGY 777

Query: 354 --LANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
               N + N +  ++S +  DY   +   P     + + ILSV ++ + +   +M +   
Sbjct: 778 RQWCNKLWNAIRFAMSKLGDDYTPPMEIVPDVMPFTCQWILSVLNKAISKTVSSMDSYEF 837

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST---VLYVTVEVIRQLAILLQAF 465
             A + V S       D + +  KP+     +P  AS            +     LL  F
Sbjct: 838 ADAASTVYSWWQFQLCDVFIEVVKPF-FSSNDPKFASARRFAQDTLWVCLDNGLRLLHPF 896

Query: 466 VPKLANKIFDILFVADENRCFQSL 489
           +P +  +++  L  A +    +S+
Sbjct: 897 MPFVTEELWQRLPPARDCARKESI 920



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 43/148 (29%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA    I D + R+ R+ G + L+  G D  G      
Sbjct: 164 SSKPPFVIVLPPPNVTGALHIGHALTSAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVV 223

Query: 62  AQNAGVTTKV-----------------FVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + ++           +  S D      T +++ 
Sbjct: 224 VEKKLMRERKLTRHDIGRENFVSEVWNWKNEYGGVILKQQRRMGASLDWTRECFTMDEKR 283

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++  +G IY+      +  
Sbjct: 284 SLAVTEAFVRLYKEGLIYRDLRLVNWDC 311


>gi|282601228|ref|ZP_05981133.2| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569765|gb|EFB75300.1| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 853

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+A   H+GH       D++AR  R  G +VL+  G D  G      
Sbjct: 35  SKPKFYALVEFPYPSAAGLHVGHPRSYTALDIVARKKRQCGYNVLYPMGWDAFGLPTENY 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  ++   +N   F+     L +S+  D  I TT+  ++   + ++ ++  KG  
Sbjct: 95  ALKNHINPEIVTAKNVARFKSQLQALGLSFDWDREINTTDPEYYKWTQWIFLQLYKKGLA 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  Y    +    ++EV  G          +PV    +  +  +++AY D+L+  
Sbjct: 155 YKKETTVNYCTGCKVVLANEEVVNG----VCERCGSPVVQKVKSQWMLKITAYADRLIDD 210

Query: 180 Y 180
            
Sbjct: 211 L 211



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 121/421 (28%), Gaps = 110/421 (26%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +Y          +   +   D V+       Y  +  P+ + E+ G+     +     L
Sbjct: 407 KMYAWLEENGKGCKKVNFKLRDWVFSRQ---RYWGEPIPMVYCEKCGWQPLPESELPLRL 463

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI- 232
                            +     ++G   L+   +  +        P       M  W  
Sbjct: 464 PEI--------------KDFEPGENGESPLARHTEWVNTTCPHCGGPAKRETDTMPQWAG 509

Query: 233 --DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
                  Y               ++W P D +  G +    H +Y   +         + 
Sbjct: 510 SSWYFLRYCDPHNKDAIASKEALEYWSPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVP 569

Query: 282 ANLPLPKKVFSHGFILHKGE---------------------------------------- 301
              P  K+      +                                             
Sbjct: 570 TKEPYHKRTSHGMILGLNPHAFENQTDAERKRLVAEYGSEKAAREALVEKFGEMAEHPIV 629

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSLGNV++P +V+ E G D LR + +      K   ++   +K         G    
Sbjct: 630 KMSKSLGNVVNPDDVVNEYGADTLRLYEMFIGDFEKAAPWNTSSIK---------GCKRF 680

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + +   M  K  +G    P         + +V +R ++++ E++     + A+AQ++  V
Sbjct: 681 LDKIWGMSEKLLEGDTIRP--------ELEAVANRTIKKVGEDIDALKANTAIAQLMIYV 732

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + +              ++   A+   Y        L  LL  F P +  +++  +   +
Sbjct: 733 NSL--------------SDHGGANRAEY------EVLLQLLNPFAPHMTEELWQQMGHTE 772

Query: 482 E 482
           +
Sbjct: 773 Q 773


>gi|170016938|ref|YP_001727857.1| leucyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688957|sp|B1MY11|SYL_LEUCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169803795|gb|ACA82413.1| leucyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 803

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y      YP+ Q  H+GH       D+++RF R  G +VL   G D  G    +
Sbjct: 28  TDKPKYYAVDMFPYPSGQGLHVGHPEGYTATDIMSRFKRAKGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  QN  +FR+    L +SYD    I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAMKTGHNPADFTSQNIDHFREQIKSLGLSYDWNREINTTDPSYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D     ++EV  G          N V+      +  +++AY D+L+ 
Sbjct: 148 AYESNMMVNWDPIDRVVLANEEVIDGKS----ERSGNKVERKALRQWVLKITAYADRLVD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E++   I   K
Sbjct: 204 DLDDLDWPEAIKEQQRNWIGRSK 226



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 106/285 (37%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPHNDHQLADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P +++ E G D LR + +      +   + +
Sbjct: 557 EPFQKLVNQGMILGANHEKMSKSKGNVVNPDDIVREYGADTLRVYEMFMGPLTQSKPWSE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +G+               + R   +++ D   +          D  +  +  + ++++ +
Sbjct: 617 EGITGS---------RRWLDRVWRLLIDDEGQLRDHVTTVNPGD--LDKIYHQTVKKVTD 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  V++              K++         + V  +     LL 
Sbjct: 666 DLENMRFNTAISQMMVFVNDA------------YKSDA--------LPVTYMNGFIQLLA 705

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            F P LA +++  L    E+  + S         ++  T + IF 
Sbjct: 706 PFAPHLAEELWVRLG-NRESISYVSWPTYDDTK-LVDDTVEIIFQ 748


>gi|299535363|ref|ZP_07048685.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729124|gb|EFI69677.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 805

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 28  TAKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++  KG 
Sbjct: 88  YALDTGNDPAEFTAKNIATFKRQIQELGFSYDWDREINTTDPAYYKWTQWIFIQLYKKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY D+L+ 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLID 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEEVDWPESIKDMQRNWIGRSE 226



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 119/344 (34%), Gaps = 56/344 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                + F    Y  + +         I P+      +   K+     S + ++    I 
Sbjct: 410 YRLRDWLFSRQRYWGEPIPMIHWEDGTITPVPESELPLMLPKTDNIRPSGTGESPLANID 469

Query: 220 IPDD------------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +                M  W         Y+  T      D    K W P D+++ 
Sbjct: 470 EWVNIVDPETGKKGRRETNTMPQWAGSSWYFLRYIDPTNTEAIADPELLKRWLPVDIYIG 529

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPI 314
           G +    H +Y   +         +    P  K +F+ G IL +G EK+SKS GNV++P 
Sbjct: 530 GAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPD 588

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I   G D LR + +          +  +GL         +G    + R   + + + D
Sbjct: 589 EIITSHGADTLRLYEMFMGPLEASVAWSTNGL---------DGARRFLDRIWRLFVNEED 639

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G I      +  D+S+     + ++++ E+ +    + A++Q++  +++  +        
Sbjct: 640 GAISAKIQVSN-DQSLEKSYHQTVKKVTEDYEGIRFNTAISQMMVFINDCYK-------- 690

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                    A  +     E       +L    P +A +++ +L 
Sbjct: 691 ---------ADVIPTTYAEGF---VKMLAPIAPHIAEELWQLLG 722


>gi|56698255|ref|YP_168628.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|60390660|sp|Q5LMY0|SYL_SILPO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56679992|gb|AAV96658.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 852

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 83/219 (37%), Gaps = 7/219 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+   +G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLSNGFNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
             +G   K +  +N          L    D      T +  ++   + L+    +KG +Y
Sbjct: 90  MASGGHPKDWTYKNIETMVAQMKPLGFGLDWSRMFATCDPEYYGQQQALFLDFLEKGLVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E   +FF++S    +LL   
Sbjct: 150 RKNAVVNWDPVDMTVLANEQVEDG----RGWRSGALVERRELTQWFFKISDMSGELLDAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           ++  ++   ++           GL   S +      GI+
Sbjct: 206 DTLDDWPAKVKLMQANWIGKSRGL-QFSWALTEPAHGIE 243



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 116/385 (30%), Gaps = 94/385 (24%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     PV   +  G            L    +      P++R          
Sbjct: 427 WGLSRQRYWGCPIPVVHCDACGVVPEKKENLPIRLPDDVTFDVPGNPLDRHPT------- 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PA 258
                         G     +    M  ++D  + Y             D ++A++W   
Sbjct: 480 -----WRDCACPSCGKPARRETD-TMDTFVD-SSWYFARFTAPRAETPTDMAEAEYWMNV 532

Query: 259 DLHVIGKDILRFHAIY----WPAFLLSANLP----------LPKKVFSHGFILHKGE--- 301
           D ++ G +    H +Y      A  +  +LP            + + +H      G    
Sbjct: 533 DQYIGGIEHAILHLLYSRFFARAMHICGHLPEKSKEPFNALFTQGMVTHAIYKTTGADDR 592

Query: 302 ------------------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                                         K+SKS  NV+DP+ +I+  G D  R+F++ 
Sbjct: 593 PVYHYPEAVRLEGGKGYLEDGTEVEIIPSAKMSKSKNNVVDPVAIIDRFGADTARWFVLS 652

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
           +    +D  +   G +        N + NL  R  +M             A  E D+ +L
Sbjct: 653 DSPPERDVEWTDAGAEAAHKH--LNRVWNLCDRIAAM----------DSAAPGEGDDDLL 700

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++   +++   + ++A++ +  +             L K+            
Sbjct: 701 REMHKCIRDVTNGIESFGFNASIAKLYAFTN------------TLAKS-----KAGAAAQ 743

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
            + I  LA L+    P LA  I+  
Sbjct: 744 KQAIMTLAQLMSPMTPHLAEDIWAH 768


>gi|56479511|ref|YP_161100.1| valyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81820978|sp|Q5NXL5|SYV_AZOSE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56315554|emb|CAI10199.1| valyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 948

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/375 (15%), Positives = 117/375 (31%), Gaps = 60/375 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H       +   +   +V     +         
Sbjct: 396 PENWINTYNQWLNNIQDWCISRQLWWGHQIPAWYADVEGDSRVWVAHDEAEAKSLAAKDG 455

Query: 216 WGIKIPDDPQYIMYVWIDALTNYL----TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           +  ++  D   ++  W  +          T  + +  + +   + P+ + V G DI+ F 
Sbjct: 456 FTGRLRRDDD-VLDTWYSSALWPFSTLDWTAEWPEKSNDALDLYLPSSVLVTGFDIIFFW 514

Query: 272 --AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE---------- 319
              +      ++  +P             +G+K+SKS GNV+DPI++I+           
Sbjct: 515 VARMVMMTKHITGKIPFRDVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGISADELAKKR 574

Query: 320 ---------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
                                       G DALR+        G+D  +D    +     
Sbjct: 575 TFGLMNPKQAQSIEKKTRKEFPEGIPAFGTDALRFTFASLATPGRDIKFDLSRCEG--YR 632

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPG----------AFTESDESILSVCSRVLQEIR 402
           +  N + N  +R V M  +  D  I               F+ +D  I+S   R   E+ 
Sbjct: 633 NFCNKLWN-ATRFVLMNCEGQDCGISAAAGSAACNTANLDFSFADRWIVSKLQRTEAEVA 691

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           ++ ++         V   V +   D Y +  K      T   + +T     + V+  +  
Sbjct: 692 QHFRDYRFDLVSKAVYEFVWDEYCDWYVELAKVQIQSGTEAQQRAT-RRTLLRVLETVLR 750

Query: 461 LLQAFVPKLANKIFD 475
           L    +P +  +++ 
Sbjct: 751 LAHPLIPFITEELWQ 765



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 22/170 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             I           H+GH +   I D L R+HR+ G + L+  GTD  G           
Sbjct: 38  FCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGFNTLWQPGTDHAGIATQIVVERQL 97

Query: 60  ------------KAAQNAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                       +         K +     +R  R +    D   + F  T ++    T 
Sbjct: 98  DAKGVSRHDLGREKFVEKVWEWKEYSGGTITRQMRRLGTSPDWKRERF--TMDEGLSKTV 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
              + ++ ++G IY+G     +  +     +D EV    +  +      P
Sbjct: 156 TETFVRLYNEGLIYRGKRLVNWDPKLGTAVSDLEVVSEEEDGFLWHITYP 205


>gi|330834408|ref|YP_004409136.1| valyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566547|gb|AEB94652.1| valyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 808

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 23/338 (6%)

Query: 158 QWMEEEGYFFRLSAYQDK--LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           +W+    + + +S  +     L ++      + P E  +  I   KS       S     
Sbjct: 402 EWINNIEWDWNISRQRIYGTPLPFWYCDNLHLTPAEISSLPIDPTKSPPPADKCS----V 457

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G+ +     ++  VWID+    +             AK +PAD+ + G DI+R    Y 
Sbjct: 458 CGLPLKP-LTHVADVWIDSSVT-VLYLSGFYTDREKFAKVFPADVRLQGTDIIRTWLFYT 515

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +   +L+ N+P  K +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + 
Sbjct: 516 LFRTLILADNVPFKKVIVHGQVLGPDGTRMSKSKGNVVSPLDRLDEFGADAIRMTLL-DA 574

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           + G D  +  D +K +        + N    +   I  +    +  P +    D+ IL+ 
Sbjct: 575 SLGDDFPFKWDTVKGKKLLL--QKLWNAGRLAYPFIKGN---NVHKPDSLHLLDQWILAK 629

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
               +++  +  +NQ     L+ + +   E   D Y +  K             + +Y  
Sbjct: 630 HKEFVEKSIQAYENQDFFVILSMLYNYFWETIADEYLELIKHRLFSGDE-----SAIYTL 684

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             VI+ L ILL    P +  +I+ +LF   E+   +S+
Sbjct: 685 KRVIKDLIILLHPIAPHITEEIYSLLFGEKESVLLESI 722



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +   +I T   + + + H+GHAY + IAD + RF +L G +VL   G D  G      
Sbjct: 47  SSKPIFFIDTPPPFTSGELHMGHAYWVTIADAMGRFKKLQGYNVLLPQGWDTQGLPTELK 106

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCR 107
            Q      K            + +      +     L    +++ F  RT    +    +
Sbjct: 107 VQYKLGIPKENRELFLKKCVEWTEDMINRMKSAMIRLGYRPNWEQFEYRTYLPEYRKVIQ 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + +KG I       ++  + E      EV  
Sbjct: 167 RSLIDMYNKGIIRMRQGPVYWCPKCETAVAQSEVGY 202


>gi|330813399|ref|YP_004357638.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486494|gb|AEA80899.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 854

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K Y      YP+ + H+GH     + DV+A F RL+G +VL   G D  G     A
Sbjct: 31  KTKKKFYCLEMFPYPSGKIHMGHVRNYTLGDVVANFKRLNGFNVLHPMGWDSFGMPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K + + N +  +    +L  S D    I T  + ++   +  +  +  K  +
Sbjct: 91  AIQNKLHPKDWTNSNIQTMKSQLKLLGFSIDWEREISTCNEDYYKHQQKFFLDLYKKDLV 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +   D     +++V  G            V   +   +FF+++ + + L   
Sbjct: 151 YKKESLVNWDPVDNTVLANEQVVDGKG----WRSGAEVVQKKLSQWFFKITDFAEDLDQS 206

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E+  ++   ++   +       G
Sbjct: 207 LETLKDWPEKVKLMQKNWIGKSKG 230



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 101/290 (34%), Gaps = 70/290 (24%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------------- 278
                + ++  +    D   AK+W P D ++ G +    H +Y   F             
Sbjct: 505 WYFLRFCSSNNHNVGYDLDDAKYWMPVDQYIGGVEHAILHLLYSRFFSRAISLKTKYEIK 564

Query: 279 ------------------LLSANLPLPKKVFSHGFILHKGEKISKSL------------- 307
                                     P+ V        +  K SK               
Sbjct: 565 EPFKGLFTQGMVCHKTFKTEDGQWVYPEDVVEENGNTFE--KTSKKKIVVGSSESMSKSK 622

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            NV+DP  VI+  G DA+R+F++ +    +D  + ++G+         +     V     
Sbjct: 623 KNVVDPQSVIDIYGADAVRWFMLSDSPPERDIQWSEEGIVG------CHKFIQKVWLMTE 676

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           MI    D    +     E       + ++ ++EI  N+++   + A+A+    V+  +++
Sbjct: 677 MIQSISDTTRISKDKKLEL----KKLINKCIKEITLNIEHFHFNVAVAKFYEFVNSFNKH 732

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       N DR   +      ++++  +L+  F+P LA++I++ +
Sbjct: 733 I--------INENCDRDEFIS-----IVKKFVVLIYPFIPHLASEIWERI 769


>gi|315122642|ref|YP_004063131.1| valyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496044|gb|ADR52643.1| valyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 945

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 23/268 (8%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN 283
            + ++  W  +      + G+ +     K  ++P ++ V G DIL F    W A ++   
Sbjct: 506 DEDVLDTWFSSALWPFASLGWPEKTIELKT-YYPTNVVVTGFDILFF----WIARMMMMG 560

Query: 284 LPLPKK-----------VFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           L   K            V+ H  +  K G+K+SKS GNV+DPI++I + G DALR++   
Sbjct: 561 LHFMKDSENKGIEPFRIVYMHALVRDKYGQKMSKSKGNVVDPIDLINQYGADALRFYFSI 620

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               G+D   D   +      +      N V R   +    +             ++ I+
Sbjct: 621 MAVQGRDIKLDLARVVG--YRNFITKFWNAV-RFAEIKNAKHSVSFVPQNVKCVINKWIV 677

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
              S V+ E+   ++N   +   A +   V     D Y +  K   L + + D  S  L 
Sbjct: 678 VRLSTVINEVTTGIENHRFNDISAILYRFVWHELCDWYVEFIKS-ILNQDDSDLISETLS 736

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               V+  +  LL   +P +  +++  +
Sbjct: 737 CFSYVLYNVCKLLHPIIPFVTEELYAYI 764



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 24/171 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E   I           H+GHA+  +I D++ RF R+ G +VL+  G D  G      
Sbjct: 33  SDSESFCIVMPPPNVTGSLHMGHAFNSVIQDIMIRFERMRGKNVLWQPGMDHAGIATQIM 92

Query: 62  AQNAGVTT----------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            +                K F+++                + +    D S + F  T ++
Sbjct: 93  VERQLSAESSLTRKDIGRKAFIEKVWDWKKKSGSSILSQLKKIGASCDWSRERF--TMDQ 150

Query: 101 RHHDTCRILWKKISDKGDIYKGC-YSGWYSLRDEAYYNDDEVYKGADGQYY 150
               +    +  +  +G IYK    S W      +  + + V    DG  +
Sbjct: 151 GMSKSVIEAFVSLYKEGLIYKDKRISNWDPYLGTSVSDLEVVQNEVDGSLW 201


>gi|254450196|ref|ZP_05063633.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264602|gb|EDY88872.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 851

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLATGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  K +  QN  +         L I +     T +  ++   + L+  + D G I 
Sbjct: 90  MQTGIHPKDYTYQNIDDMVAQMKPLGLGIDWSRMFATCDPEYYGQQQSLFIDMLDAGMID 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D     +++V  G            V+  +   +FF++S Y D+LL   
Sbjct: 150 RKNATVNWDPVDMTVLANEQVIDGKG----WRSGAEVERKDLTQWFFKISDYADELLEAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   ++           GL+
Sbjct: 206 DGLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 122/375 (32%), Gaps = 67/375 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-----YESHPEFILPIERRNEVI 197
            G   Q Y     PV   ++ G            L Y        +P    P  R     
Sbjct: 427 WGLSRQRYWGAPIPVVHCDDCGVVPEKKENLPVELPYDVSFDIPGNPLDRHPTWRNTPCP 486

Query: 198 SFVKSGLKD-------LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           +  K+ L++       +  S     +       P            +             
Sbjct: 487 ACGKASLRETDTMDTFVDSSWYFARFTAPHALTPTQAEDAAYWMNVDQYIGGIEHAILHL 546

Query: 251 SKAKFWPADLHVIGK----DILRFHAIYWPAFLLSA-------------NLPLPKKVFSH 293
             ++F+   +H  G      I  F A++    +  A             + P    +   
Sbjct: 547 LYSRFFARAMHKTGHLPATAIEPFDALFTQGMVTHAIFKTESADGRPVYHYPEAVDLRDG 606

Query: 294 GFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           G  L  G         K+SKS  NV+DP+ +IE+ G D  R+F++ +    +D  +   G
Sbjct: 607 GGFLKDGTQVDIIPSAKMSKSKNNVVDPVAIIEQYGADTARWFVLSDSPPERDVEWTASG 666

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +            + V R    I ++ D       A  + DE++L    + + E+ + +
Sbjct: 667 AEATF------KHLSRVHRIACDIAENTD-------AANDQDEALLRDMHKAIFEVTQGV 713

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           ++   + ++A++    + + +           K   D   T +       + LA L+   
Sbjct: 714 ESFGFNASIAKLYGFTNAIAK----------SKAGSDAKRTAM-------KTLAQLMSPM 756

Query: 466 VPKLANKIFDILFVA 480
            P LA  I+++L  A
Sbjct: 757 TPHLAEDIWEMLGGA 771


>gi|157693425|ref|YP_001487887.1| leucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157682183|gb|ABV63327.1| leucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 849

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 7/220 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    +
Sbjct: 73  EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 132

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF ++N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 133 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 192

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 193 AYIDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 248

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E         + +   I   +       +      + +
Sbjct: 249 DLEDIDWPESIKDMQRNWIGRSEGAHVHFEIEGHDEQFTV 288



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/388 (13%), Positives = 123/388 (31%), Gaps = 45/388 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA-Y 172
              G   +       +  +E    + +V        ++ Q    + +    +    S+  
Sbjct: 426 FLDGLGKEEAIEKVIAWLEEHQKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSSAV 485

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
            ++ L         I P       ++ +K  ++ +           +    PQ+    W 
Sbjct: 486 SEEDLPLILPKTTEIKPSGTGESPLANIKDWVEVVDPVTGKKGRR-ETNTMPQWAGSCW- 543

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+      +     K K W P D+++ G +    H +Y   +         +   
Sbjct: 544 -YFLRYIDPHNSEELASPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 602

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P +++E  G D LR + +          + +
Sbjct: 603 EPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGPLDASIAWSE 662

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            GL         +G    + R   +   +   +       T    ++       + ++ +
Sbjct: 663 TGL---------DGARRFLDRVWRLFTNEDGTISDKVTEQTGG--ALERSYHETVMKVTD 711

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    +  ++Q++  +++  +                       +  E       LL 
Sbjct: 712 HYEGLRFNTGISQLMVFINDAYK--------------------ADTLPKEYAEGFVKLLS 751

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491
              P LA ++++ L     +  +++  Q
Sbjct: 752 PIAPHLAEELWNKLGHEG-SISYEAWPQ 778


>gi|317178266|dbj|BAJ56055.1| leucyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 806

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG +Y+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFETLGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLVYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLEA 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLTMQKNWIGKSSGLQ 228



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 109/381 (28%), Gaps = 46/381 (12%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           W  +S      +           +   N      G   Q Y     P+   +  G     
Sbjct: 382 WSDLSSSVAREQIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIVPET 441

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                             L      +     K     L  +            D      
Sbjct: 442 QLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKNALRETDT---------MDTFIQSS 492

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T                  F P D ++ G +    H +Y   F         L+
Sbjct: 493 WYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLN 552

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P  K++ + G +L  G K+SKS GNV+ P E++++ G DA R F++      K+  +
Sbjct: 553 LDEPF-KQLITQGMVLKDGAKMSKSKGNVVSPKEILKKYGADAARLFILFAAPPAKELEW 611

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + + L+       A+     +    S I            +  E+++         L++ 
Sbjct: 612 NDNALEG------AHRFIKRLYDKASAINPTTSKPEFKEVSLNEAEKLGRKKVYETLKKS 665

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +  ++ +                   A     +  E    
Sbjct: 666 HEIFNKAESAYAFNTLIASCMEALNALS------------------AQNNERILCEGYFV 707

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  +P  A ++ + LF
Sbjct: 708 LLQILEPIIPHTAWELSERLF 728


>gi|239917749|ref|YP_002957307.1| leucyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413756|ref|ZP_06245498.1| leucyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838956|gb|ACS30753.1| leucyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 835

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 7/197 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +     YP+   H+GHA    + DV+AR     G DVL   G D  G     AA  
Sbjct: 48  ETRTVVDMFPYPSGDLHMGHAEAFAMGDVVARHWMQRGFDVLHPIGWDSFGLPAENAAIK 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +   N    +       I+ D    + T++  ++   + L++++  KG  Y+ 
Sbjct: 108 RDAHPAEWTYANIETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRKGLAYRK 167

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V  G            V       ++FR++ Y D LL     
Sbjct: 168 DSPVNWCPQDQTVLANEQVVDG----RCERCGTEVTKRTLNQWYFRITEYADALLDD-MD 222

Query: 183 HPEFILPIERRNEVISF 199
                 P        ++
Sbjct: 223 QLTGHWPERVLAMQRNW 239



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 110/300 (36%), Gaps = 37/300 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            +       G     D    M  ++D+      Y +        D    + W P D +V 
Sbjct: 493 WVEVDCPQCGGPARRDTD-TMDTFVDSSWYVLRYASPNDDARVFDPEALRRWLPVDQYVG 551

Query: 264 GKDILRFHAIYWP----AFLLSANLPLP---KKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y      A      +P     + + + G +L+ G+ +SKSLGN +D  + 
Sbjct: 552 GVEHAILHLLYARFFTKALHDLGLVPFTEPFRSLLNQGQVLNGGKAMSKSLGNGVDLGDQ 611

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG-IGNLVSRSVSMILKDYDG 375
           ++E GVDA+R  +V       D  +          AD+A G  G  ++R+  +       
Sbjct: 612 LDEFGVDAVRLTMVFASPPEDDVDW----------ADVAPGAAGKFLARAWRLARDVRAT 661

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
             P      +   ++  V  R + E ++ + +   +  +A+ + LV+             
Sbjct: 662 GAPAGADPADGAVALRRVTHRTVHEAQQLLDDGKFNVVVAKTMELVNAA----------- 710

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
            +K     A        E +  +A+LL    P  A  ++ +L          + ++D+ L
Sbjct: 711 -RKEIDAGAGAADPAVREAVEAVAVLLSLVAPYTAEDMWVLLGHEPSVVRAGWPAVDESL 769


>gi|254525827|ref|ZP_05137879.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537251|gb|EEE39704.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 856

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 87/224 (38%), Gaps = 5/224 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     A
Sbjct: 41  ENTDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G++  V+  +N  + R    +L +S  +D    T ++ ++   + L+ ++   G +
Sbjct: 101 AIERGISPSVWTKKNISHMRSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLV 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V          A    V+    + +F R++ Y D+LL+ 
Sbjct: 161 YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGA---VVEKKLLKQWFLRITNYADELLND 217

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            E    +   ++   +       G              I +   
Sbjct: 218 LEKLDNWPERVKIMQDNWIGKSIGTNINFNINTNPKEKITVFTT 261



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 106/323 (32%), Gaps = 68/323 (21%)

Query: 203 GLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
           G  +  ++      GI  K   D              Y ++       +  +   W P D
Sbjct: 479 GDNNHWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSKCSNKPFEKIEINKWLPVD 538

Query: 260 LHVIGKDILRFHAIYWPAFL--------LSANLPL------------------------- 286
            +V G +    H +Y   F            + P                          
Sbjct: 539 QYVGGVEHAILHLLYARFFTKALRDNELFEIDEPFKKLLTQGMVQAAAYKNNKTGKYVSP 598

Query: 287 --------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   PK    +  +    EK+SKS  N IDP  VI++ G D  R F++ +    KD
Sbjct: 599 SDINDLSNPKDPIDNTKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKD 658

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +    ++         G    +SR   + +     +     ++ + ++ ++   +  +
Sbjct: 659 LEWGDTDVE---------GQFRFLSRIWKLYIDCAKDINSKSNSYPDKEKRLIKSMNIAI 709

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +EI  ++ N   + A+++++   + +    +                    + +E ++  
Sbjct: 710 KEISNDILNNQFNTAISELMKFYNSLSNSINEVN---------------NNLKIEALKTF 754

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
           +ILL  F P +A +I+ ++    
Sbjct: 755 SILLAPFAPHIAEEIWHLIGFKK 777


>gi|291277218|ref|YP_003516990.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964412|emb|CBG40262.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 806

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 67/178 (37%), Gaps = 6/178 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+   H+GH     I D +AR +R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGALHMGHVRNYCIGDAMARHYRKQGFNVLHPIGFDAFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G   K +   N          L  S+       T +  +    +  +  +  KG +Y+ 
Sbjct: 91  HGAHPKEWTYSNIEAMHKEFKSLGFSFSRERSFATCDPLYTKWEQEFFIDMWQKGLVYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                +  +D+    +++V  G            +   E   Y+ +++ Y ++LL+  
Sbjct: 151 KAFLNWCPKDQTVLANEQVVDGK----CWRCDTEIIQKEMVQYYIKITDYAEELLADL 204



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 114/384 (29%), Gaps = 40/384 (10%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +         +  +       K           +   +      G   Q Y     P+  
Sbjct: 370 EEGELIHSESFDGLHGTQAKEKIISYFESKHLGKKVMHFRLKDWGISRQRYWGAPIPLLH 429

Query: 160 MEEEGYFFRLSAYQDKLLSY--YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            E+ G   +        L      +     L   +  +V    K G      +       
Sbjct: 430 CEKCGIEPQSKEKLPITLPDDVVINGEGNPLDKHKTWQVDICPKCGGAARRETDT----- 484

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
                D  +    +    T   +        + S   +   D ++ G +    H +Y   
Sbjct: 485 ----MDTFFQSSWYFLRYTTPRSLWVQCAFDEKSTGYWLEVDEYIGGVEHAILHLLYARF 540

Query: 278 F--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F         +  + P    + + G +L +G K+SKSLGNVI+P  +I++ G D  R F+
Sbjct: 541 FTKVLRDLGYIHFDEPF-SNLLTQGMVLKEGRKMSKSLGNVIEPHAIIQKYGSDTARLFV 599

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      K+  +   G++               S+ +S + K            +E +  
Sbjct: 600 LFAAPPAKELEWIDGGVEGAYR--FIRKFYEK-SQILSPLQKK---PQIQTQNLSEPERL 653

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
                   LQ+ ++    +    A   +I+   E       Q+               L 
Sbjct: 654 ARKKVYEALQKSQDIFSKKQPGFAFNTLIAACMEAFNALSVQEN--------------LM 699

Query: 450 VTVEVIRQLAILLQAFVPKLANKI 473
           +  E    L+ +L+  +P +  +I
Sbjct: 700 IWSEGYYILSNVLEPMIPHVCWEI 723


>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123743221|sp|Q3AEP2|SYI_CARHZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 925

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 13/300 (4%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               ++G       R     G+K   +   IM VW D+ +++       +     +   W
Sbjct: 494 WWKYEAGEILPDGFRCPHCGGVKFRKETD-IMDVWFDSGSSHAAVLEQPEYWPDLR---W 549

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PADL++ G D     F++    A       P    +     +  KG K+SKSLGNV+DP+
Sbjct: 550 PADLYLEGSDQHRGWFNSSLSTAVATRGMAPYKAVLTHGFLVDEKGRKMSKSLGNVVDPL 609

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DY 373
           +VI+E+G D LR ++        D     + LK+   A+    I N +   +  +   D+
Sbjct: 610 KVIKELGADILRLWVASADY-RSDLAISNNILKQ--TAEGYRKIRNTIRFLLGNLYDYDH 666

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQ 431
           +          E D   L+   R++  +    ++   H     V +   V     Y D  
Sbjct: 667 EKHRVPYERLLEIDRWALAKLHRLIARVVRAYRDYEFHVVFHAVHNFCTVDMSAIYLDII 726

Query: 432 KPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K    ++  + ++  +   V  E++  L  LL   +     + +       +    Q LD
Sbjct: 727 KDRLYVELPDSEKRRSAQTVLYEILDSLLRLLTPILAFTTEEAYRHFPAKGKKESVQLLD 786



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GH    ++ D++ +F  +DG D  +  G D HG  I + 
Sbjct: 45  EGRPKFILHDGPPYANGDIHMGHVLNKVLKDMIVKFKSMDGYDAPYVPGWDTHGLPIEQR 104

Query: 62  AQN------AGVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
           A          ++        + + ++ +R  ++    L +  D      T    +    
Sbjct: 105 AIKDLGINRKEISPLEFRAKCREYAEKYARIQKEQFKRLGVRGDWENPYLTLMPHYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ KG IYKG    ++    E    + E+  
Sbjct: 165 IEIFGEMAKKGYIYKGLKPVYWCPVCETALAEAEIEY 201


>gi|238916624|ref|YP_002930141.1| leucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871984|gb|ACR71694.1| leucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 816

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 91/255 (35%), Gaps = 16/255 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      
Sbjct: 42  SKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENY 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K+    N  +F++    +  S+  D  I TT+  ++   + ++ K+   G  
Sbjct: 102 AIKNKIHPKIVTKNNIDHFKEQLQSIGYSFDWDREINTTDPDYYKWTQWIFLKLFKAGLA 161

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV  G          +PV    +  +  +++ Y DKL+  
Sbjct: 162 YKQEMPINWCTSCKVGLANEEVVNG----VCERCGSPVVRKVKSEWMLKITDYADKLIEG 217

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +          ++   I            +    D+ I   +D   I     D L    
Sbjct: 218 LDHVDYIERVKTQQKNWIG---------RSTGAEVDFAIAGKEDKLRIYTTRCDTLFGVT 268

Query: 240 TTTGYLDNPDGSKAK 254
                 ++P   K K
Sbjct: 269 YMVVSPEHPYLDKYK 283



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 112/343 (32%), Gaps = 61/343 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P++           E      +G   L+   
Sbjct: 431 YKLRDWVFSRQRYWGEPIPIVHCDKCGYVPVDESELPLLLPEVESYMPTDNGESPLAAMT 490

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y               K+W P D +  
Sbjct: 491 DWVNTTCPCCGGPAKRETDTMPQWAGSSWYFLRYTDPHNTETLASQEALKYWLPVDWYNG 550

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +   GEK+SKS GNV++P +
Sbjct: 551 GMEHTTLHLLYSRFWHRFLYDQKVVPCPEPYQKRTSHGMILGENGEKMSKSRGNVVNPDD 610

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D LR + +   A      + +DG+K                R +  + K  D 
Sbjct: 611 IVRDYGADTLRTYEMFIGAFDAAASWSEDGVKG-------------CRRFLDRVWKLQDI 657

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           M    G      +   +   + ++++  + +N   + A+AQ++++++      D  K  +
Sbjct: 658 MTDEEG----FSKEFETKMHQTIKKVSFDYENLKYNTAIAQLMTMLN------DFSKAGK 707

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + K                ++   ILL    P +  ++++ + 
Sbjct: 708 ITKGE--------------LKTYLILLNPVAPHITEEMWEAIG 736


>gi|138896379|ref|YP_001126832.1| leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267892|gb|ABO68087.1| Leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 811

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 34  SDKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQ 93

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 94  YALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 153

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 154 AYMDEVPVNWCPALGTVLANEEVING----RSERGGHPVIRKPMRQWMLKITAYADRLLE 209

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         E +   I   +
Sbjct: 210 DLEELDWPESIKEMQRNWIGRSE 232



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 97/267 (36%), Gaps = 41/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P D+++ G +    H +Y   +    
Sbjct: 497 PQWAGSCW--YYLRYIDPHNDKQLADPEKLKQWLPVDVYIGGAEHAVLHLLYARFWHKVL 554

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P +++E  G D LR + +    
Sbjct: 555 YDLGIVPTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGP 614

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL         +G    + R   + + +   + P       +++++  V 
Sbjct: 615 LEASIAWSTKGL---------DGARRFLERVWRLFVTEDGQLNPNIVD-EPANDTLERVY 664

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +    + A++Q++  ++E  +    +K                    E 
Sbjct: 665 HQTVKKVTEDYEALRFNTAISQLMVFINEAYKAEQMKK--------------------EY 704

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +     LL    P +  +++  L   D
Sbjct: 705 MEGFVKLLSPVCPHIGEELWQKLGHTD 731


>gi|310643097|ref|YP_003947855.1| leucyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248047|gb|ADO57614.1| Leucyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 812

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 36  GKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQH 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   +    +N  NFR     L  SY  D  I TT+  ++   + ++ ++  +G  
Sbjct: 96  ALDTGEHPREITVKNVNNFRRQIKSLGFSYDWDREISTTDPDYYKWTQWIFIQLYKRGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  +++ Y D+LL  
Sbjct: 156 YVAEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVIRKPMRQWMLKITEYADRLLDD 211

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 212 LEELDWSESIKDMQRNWI 229



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 98/270 (36%), Gaps = 42/270 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++ +     K + W P DL++ G +    H +Y   + 
Sbjct: 493 ETNTMPQWAGSCWYYLRFIDPKNDKELVSKEKQREWMPVDLYIGGAEHAVLHLLYARFWH 552

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  K V     + +  EK+SKS GNVI+P +++   G D LR + + 
Sbjct: 553 KVLYDIGVVETKEPFYKLVNQGMILGNNNEKMSKSRGNVINPDDIVNTFGADTLRIYEMF 612

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    ++++G++         G    +SR   + + +   +         SDE   
Sbjct: 613 MGPLEATKPWNENGVE---------GAHRFLSRVWRLFVSEDGSLNEKIKNDGGSDE-FK 662

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + L+++ E++     + A++Q++   ++  +                       + 
Sbjct: 663 RTWHKTLKKVTEDLDALRFNTAISQLMIFTNDAYK--------------------ADLLP 702

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +     +L    P LA +++ +L   +
Sbjct: 703 RAAMENFVQMLSPLAPHLAEELWQLLGHNE 732


>gi|219109559|ref|XP_002176534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411069|gb|EEC50997.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1052

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 125/399 (31%), Gaps = 31/399 (7%)

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           RT +          +  ++   D           + +           G      + Q +
Sbjct: 473 RTKKPTIFRATDQWFASVAGFRDQALDAVEKVKWVPEVGKNRIRSFVDGRGDWCISRQRS 532

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               +    ++ + +  +  L     +H + +      +      +S L       +   
Sbjct: 533 WGVPI--PVFYDKATGKEVLLNKDTLAHVQTLFAEHGSDCWWKMDESELLPEKFRAEADK 590

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
           W           M VW D+ ++      +           +PAD+++ G D     F + 
Sbjct: 591 W-----QKGTDTMDVWFDSGSS------WAGVAQSRDELAYPADMYLEGSDQHRGWFQSS 639

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDA 324
              +   +   P    +     +  KG K+SKSLGNV+DP++V             G D 
Sbjct: 640 LLTSVANNNIAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQDPAYGADV 699

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRV--NADLANGIGNLVSRSVSMILKD-YDGMIPTPG 381
           LR ++      G D     + +K+       L N    L+      +  D  D       
Sbjct: 700 LRLWVANSDYSG-DVLIGDNIIKQTFDSYRKLRNTARYLIGNLADFVPSDSTDSNAVAYD 758

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT 439
                D+ +L   S VL+ + E M +    RA+ +++        + Y D  K       
Sbjct: 759 DLPSMDKWMLGRLSAVLRTVNEAMDDFQYQRAIQELLRFASADLSNFYLDVAKDRLYISA 818

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  R  +   V    +      +   +P +A  I+  L
Sbjct: 819 MDDARRRSCQTVLYACLEGFTKAISPILPHMAEDIWQNL 857



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 50/155 (32%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E+  +     Y N   H GHA   I+ D + R   L+G  V +  G D HG  I      
Sbjct: 108 ERFVLHDGPPYANGDLHCGHALNKILKDFINRKQILNGKQVHYIPGWDCHGLPIELKVLQ 167

Query: 60  --KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
             K+ +   +T          F  +             I  D      T +         
Sbjct: 168 TMKSKEREALTPVTLREKAAEFAKETVEKQSVAFQRYGIFGDFEKPYLTLQPEFEAAQIR 227

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++  KG I++G     +S        + E+  
Sbjct: 228 VFGEMFQKGYIFRGRKPVHWSPSSRTALAEAELEY 262


>gi|167771623|ref|ZP_02443676.1| hypothetical protein ANACOL_02995 [Anaerotruncus colihominis DSM
           17241]
 gi|167666263|gb|EDS10393.1| hypothetical protein ANACOL_02995 [Anaerotruncus colihominis DSM
           17241]
          Length = 827

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R +G +VL+  G D  G      
Sbjct: 55  TKPKYYALVEFPYPSGQGLHVGHPRSYTALDIVARKRRFEGYNVLYPMGWDAFGLPTENY 114

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  +     N + F+     L +S+D    + TT+  ++   + ++ ++  +G  
Sbjct: 115 AIKNHIHPEKVTHDNVQRFKAQLKSLGLSFDWSREVNTTDPSYYKWTQWIFLQLFKRGLA 174

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +    +    ++EV  G          + V    +  +  +++ Y  +LL  
Sbjct: 175 YKKEMSVNWCTGCKVVLANEEVVNG----VCERCGSEVVHKVKSQWMLKITEYAQRLLDD 230

Query: 180 Y 180
            
Sbjct: 231 L 231



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 117/352 (33%), Gaps = 65/352 (18%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP------IERRNEVISFVKSGL----- 204
           P    +   + F    Y  + +          +P        R  EV S+  +G      
Sbjct: 435 PKVNFKLRDWVFSRQRYWGEPIPIIHCGHCGYVPLDESELPLRLPEVDSYEPTGDGDSPL 494

Query: 205 --KDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PA 258
              D  ++ K    G     +    M  W         Y       +        +W P 
Sbjct: 495 AAIDRWVNVKCPKCGAPAKRETD-TMPQWAGSSWYFLRYCDPHNDKELASKEALDYWMPV 553

Query: 259 DLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           D +  G +    H +Y   +              P  K+      +   GEK+SKS GNV
Sbjct: 554 DWYNGGMEHTTLHLLYSRFWHKFLYDIGVVSTPEPYAKRTSHGMILGENGEKMSKSRGNV 613

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +++ + G D LR + +      K   + +  +K         G    + R   ++ 
Sbjct: 614 VNPDDIVRDYGADTLRLYEMFIGDFEKSAPWSQSSIK---------GCKRFLERVFGLL- 663

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFD 429
              D + P     +    ++ S   + ++++ E++++   + A+A ++SL+++  D    
Sbjct: 664 ---DCLEPGEAYSS----ALESALHKTIKKVTEDIESLKFNTAIAAMMSLLNDVCDH--- 713

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                   K N     T           L ILL  F P +  ++++      
Sbjct: 714 -------GKINAAELKT-----------LLILLNPFAPHMTEEMWERAGFGG 747


>gi|152980718|ref|YP_001354586.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166231615|sp|A6T239|SYL_JANMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151280795|gb|ABR89205.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 881

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 88/230 (38%), Gaps = 6/230 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA    
Sbjct: 41  FYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANN 100

Query: 67  VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           V    +   N    +     +   I +   +      ++   + ++ K+ +KG IYK   
Sbjct: 101 VPPAQWTYANIDYMKTQMASMGLAIDWSREMTACRPEYYKWNQWMFLKMLEKGIIYKKTG 160

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +  +   D+    +++V  G            ++  E   Y+ R++ Y ++LL + ++  
Sbjct: 161 TVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYARITDYAEELLDHVDNKL 216

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                  R  +     KS     + +    + G  I D   ++     D 
Sbjct: 217 PGWPERVRIMQSNWIGKSTGVRFAFTHDIAEEGKLINDGKLWVFTTRADT 266



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 123/363 (33%), Gaps = 44/363 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + E + + D    G   +      +   +++   Y+ R  +           + 
Sbjct: 480 SGNPLNKHEKFLHVDCPQCGKPARRETDTMD--TFVDSSWYYMRYCSPNSSDAMVDSRND 537

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D+G+   D+P   +      L      T +
Sbjct: 538 YWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKFDEPFTNLLTQGMVL----NETYF 593

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKG--EK 302
            ++  G K  F PAD+ +   D                  P+   + S G  +  G  EK
Sbjct: 594 REDASGKKTWFNPADVQLQLDD---------------KGRPVSAVLSSDGKAVEIGGTEK 638

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGN 360
           +SKS  N IDP   I++ G D  R F +      +   +   G++   R    +     N
Sbjct: 639 MSKSKNNGIDPQAQIDQYGADTARLFTMFASPPEQTLEWSGAGVEGANRFLRRVWAYGYN 698

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +R  +    D+           E+ +++     ++LQ+   + +    +  ++  + +
Sbjct: 699 QAARVANASAFDF-------ATLPEAHKALRRETHKILQQADNDYKRIQYNTVVSASMKM 751

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++             L+    D +     V  E +     +L    P + + ++  L  A
Sbjct: 752 LN------------TLEAAKLDDSPASNAVISEGLSIFLRILNPVAPHITHALWQELGFA 799

Query: 481 DEN 483
            ++
Sbjct: 800 KDH 802


>gi|110668577|ref|YP_658388.1| isoleucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121692201|sp|Q18GW3|SYI_HALWD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|109626324|emb|CAJ52782.1| isoleucine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 1059

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 98/262 (37%), Gaps = 10/262 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VWID+      T  Y    D +  + WPAD  V   D     F +        +  +
Sbjct: 530 VFDVWIDSSVASWGTIDYPGETD-AYDELWPADFIVEAHDQTRGWFWSQLGMGTAATGQV 588

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +         G K+SKS GN++ P E I+  G D LR +L+     G D  ++ D
Sbjct: 589 PYEEVMMHGFANDENGRKMSKSRGNIVTPEEAIDRAGRDPLRAYLLSHDQQGVDLSFEWD 648

Query: 345 GLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEI 401
           GL +  +    N   N+    +  M L  YD        G+    DE +LS    V    
Sbjct: 649 GLGEMQST--LNIFWNVFRFPLPYMDLDGYDPATADLSEGSMNIVDEWVLSRLQSVKATT 706

Query: 402 RENMQNQLIHRALAQVISLV-SEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           R   +   I  A+  ++  +  +V R Y  A +       +             V+ +  
Sbjct: 707 RAAWEEYEIDTAVNTILEFITDDVSRFYIKAIRERMWADEDSASKRGAYATLSTVLDETI 766

Query: 460 ILLQAFVPKLANKIFDILFVAD 481
            LL    P L  +++  L  ++
Sbjct: 767 RLLAPIAPYLTEQMYQHLNGSE 788



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    +      Y + Q H+G A+   + D + R+ R+ G  V    G D HG  I    
Sbjct: 36  DDPSFFFVDGPPYTSGQMHLGTAWNKTLKDAIIRYKRMTGHHVTDRPGYDMHGLPIEVKV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F   N +   +    + +   +D+   T    + 
Sbjct: 96  EEELGFETKRDIEEYGMESFIEECKRFAVDNRKAMDEDFQSIGVWMDWDNPYETLSPEYM 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           +     ++++ D+G + +G  S  Y  R +     +EV   
Sbjct: 156 EAAWWAFQQVDDRGLVERGKRSVSYCPRCQTAIAANEVEYD 196


>gi|269125826|ref|YP_003299196.1| leucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310784|gb|ACY97158.1| leucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 838

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 87/234 (37%), Gaps = 13/234 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE+ Y      YP+   H+GHA    I DV+AR+    G +VL   G D  G     AA 
Sbjct: 52  RERRYALDMFPYPSGDLHMGHAEAFAIGDVVARYWFQRGYNVLHPIGWDSFGLPAENAAI 111

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N             S+D    + T++  ++   + L+ +  ++G  Y+
Sbjct: 112 KRNEHPAKWTYANIETQAASFRRYAPSFDWSRRLHTSDPEYYKWTQWLFLRFYERGLAYR 171

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V     G +       V+      ++FR++ Y D+LL    
Sbjct: 172 KGGQVNWCPNDQTVLANEQVV----GGHCERCGALVERRTLTQWYFRITEYADRLLE--- 224

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
              +      +  E +  ++      S +    D+ I+   +P  +     D L
Sbjct: 225 ---DMKQLEGKWPERVLVMQRNWIGRS-TGADVDFVIEGRKEPVTVFTTRPDTL 274



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 100/280 (35%), Gaps = 39/280 (13%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAF----- 278
           M  ++D+   Y                   K+ P D +  G +    H +Y   F     
Sbjct: 518 MDTFVDSSWYYFRYCSPDYTEGPFDVEQVRKWMPVDQYTGGVEHAILHLLYSRFFTKVLH 577

Query: 279 ---LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              ++    P   ++ + G ++  G+ +SKS GN++D  E I E GVD +R  ++     
Sbjct: 578 DMGMVDFTEPFT-RLLNQGQVILNGKAMSKSTGNLVDLGEQIAEHGVDVVRLAMLFSGPP 636

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             D   D   +           +  + + + +          P        D ++  V  
Sbjct: 637 EDDI--DWADVSPGAMTKFLGRVHRIAAETAA----------PVGADPATGDVALRRVTH 684

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R + E+   ++    + A+A+++ LVS   R  D         + P  A   +    E  
Sbjct: 685 RTIDEVTTLVEAYRFNVAIARIMELVSATRRAID---------SGPGAADPAVR---EAA 732

Query: 456 RQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRL 493
             +A+LL  F P  A + +++L          + S D  L
Sbjct: 733 ETIAVLLSLFAPYTAEEAWELLGRQAPVAKAGWPSADPAL 772


>gi|134095829|ref|YP_001100904.1| leucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166231614|sp|A4G8E6|SYL_HERAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|133739732|emb|CAL62783.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Herminiimonas arsenicoxydans]
          Length = 881

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 88/230 (38%), Gaps = 6/230 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA    
Sbjct: 41  FYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANN 100

Query: 67  VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           V    +   N  + +     +   I +   +   +  ++   + ++ K+ +KG IYK   
Sbjct: 101 VPPAQWTYANIEHMKTQMASMGLAIDWSREMTACKPEYYKWNQWMFLKMLEKGIIYKKTG 160

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           S  +   D+    +++V  G            ++  E   Y+ R++ Y ++LL + E   
Sbjct: 161 SVNWDPIDQTVLANEQVIDG----RGWRSGALIEKREIPMYYARITDYAEELLDHVEHKL 216

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
                  R  +     KS     + +    D    I D   ++     D 
Sbjct: 217 PGWPERVRTMQANWIGKSTGVRFAFTHDIKDDDKLINDGKLWVFTTRADT 266



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 121/357 (33%), Gaps = 36/357 (10%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           SG    + EA+   D    G   +      +   +++   Y+ R  +           + 
Sbjct: 480 SGNPLNKHEAFLKCDCPKCGKPARRETDTMD--TFVDSSWYYMRYCSPNSNDAMVDSRND 537

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            ++   +    +   V   L     ++   D+G+   D+P   +      L      T Y
Sbjct: 538 YWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKFDEPFTNLLTQGMVL----NETYY 593

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
            ++  G K  F PAD+ +   D  R      P   +  N   P ++          EK+S
Sbjct: 594 REDASGKKTWFNPADVQLELDDKGR------PVSAILNNDRQPVEI-------GGTEKMS 640

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  N IDP   I++ G D  R F +      +   +   G++   N  L        ++
Sbjct: 641 KSKNNGIDPQAQIDQYGADTARLFTMFASPPEQTLEWSGAGVEG-ANRFLRRVWTYAYNQ 699

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
           S  +               +++ +++     ++LQ+   + +    +  ++  + +++  
Sbjct: 700 SARIAAA----TASDFSKLSDAQKTLRREVHKILQQADNDYKRIQYNTVVSAGMKMLN-- 753

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                      L+    D ++    V  E +     +L    P + + ++  L  A 
Sbjct: 754 ----------TLEGAKLDESAASNAVIAEGLSIFLRILNPVAPHITHVLWQELGFAK 800


>gi|289705023|ref|ZP_06501436.1| leucine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558282|gb|EFD51560.1| leucine--tRNA ligase [Micrococcus luteus SK58]
          Length = 833

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 7/197 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +     YP+   H+GHA    + DV+AR     G DVL   G D  G     AA  
Sbjct: 48  ETRTVVDMFPYPSGDLHMGHAEAFAMGDVVARHWMQRGFDVLHPIGWDSFGLPAENAAIK 107

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +   N    +       I+ D    + T++  ++   + L++++  KG  Y+ 
Sbjct: 108 RDAHPAEWTYANIETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRKGLAYRK 167

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V  G            V       ++FR++ Y D LL     
Sbjct: 168 DSPVNWCPQDQTVLANEQVVDG----RCERCGTEVTKRTLNQWYFRITDYADALLDD-MD 222

Query: 183 HPEFILPIERRNEVISF 199
                 P        ++
Sbjct: 223 QLTGHWPERVLAMQRNW 239



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 108/300 (36%), Gaps = 39/300 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            +       G     D    M  ++D+      Y +        D    + W P D +V 
Sbjct: 493 WVEVDCPRCGGPARRDTD-TMDTFVDSSWYMLRYASPNDDARVFDPEALRRWLPVDQYVG 551

Query: 264 GKDILRFHAIYWP----AFLLSANLPLP---KKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y      A      +P     + + + G +L+ G+ +SKSLGN ++  + 
Sbjct: 552 GVEHAILHLLYARFFTKALHDLGLVPFTEPFRALLNQGQVLNGGKAMSKSLGNGVNLGDQ 611

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG-IGNLVSRSVSMILKDYDG 375
           ++E GVDA+R  +V       D  +          AD+A G  G  ++R+  +       
Sbjct: 612 LDEFGVDAVRLTMVFASPPEDDVDW----------ADVAPGAAGKFLARAWRLARDVRAT 661

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
             P      +   ++  V  R + E ++ + +   +  +A+ + LV+   +  D      
Sbjct: 662 GAPAGTDPADGAAALRRVTHRTVHEAQQLLDDGKFNVVVAKTMELVNAARKEID------ 715

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
                   A        E    +A+LL    P  A  ++ +L          +  +D+ L
Sbjct: 716 --------AGAADPAVREAAEAVAVLLSLVAPYTAEDMWVLLGHEPSVIRAGWPPVDEAL 767


>gi|196250006|ref|ZP_03148701.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|189030345|sp|A4IRY3|SYL_GEOTN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196210520|gb|EDY05284.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 805

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 28  SDKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 148 AYMDEVPVNWCPALGTVLANEEVING----RSERGGHPVIRKPMRQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         E +   I   +
Sbjct: 204 DLEELDWPESIKEMQRNWIGRSE 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 97/267 (36%), Gaps = 41/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNDKQLADPEKLKQWLPVDVYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P +++E  G D LR + +    
Sbjct: 549 YDLGIVPTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL         +G    + R   + + +   + P       +++++  V 
Sbjct: 609 LEASIAWSTKGL---------DGARRFLERVWRLFVTEDGQLNPNIVD-EPANDTLERVY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +    + A++Q++  ++E  +    +K                    E 
Sbjct: 659 HQTVKKVTEDYEALRFNTAISQLMVFINEAYKAEQMKK--------------------EY 698

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +     LL    P +  +++  L   D
Sbjct: 699 MEGFVKLLSPVCPHIGEELWQKLGHTD 725


>gi|167753118|ref|ZP_02425245.1| hypothetical protein ALIPUT_01389 [Alistipes putredinis DSM 17216]
 gi|167659432|gb|EDS03562.1| hypothetical protein ALIPUT_01389 [Alistipes putredinis DSM 17216]
          Length = 875

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 113/314 (35%), Gaps = 19/314 (6%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
               + L + +  P + LP       ++  ++  K  + S         +  D   ++  
Sbjct: 400 WCISRQLWWGQRIPAWYLPQGGYVVALNADEALEKARAKSGDASLTLADLRQDED-VLDT 458

Query: 231 WIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
           W  +    ++    +  P+      ++P +  V G DI+ F    +    +      P  
Sbjct: 459 WFSSWLWPISVFDGIRRPNNKDIEYYYPTNDLVTGPDIIFFWVARMIMAGYEYRGEKPFG 518

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              F+       G K+SK LGN  DP+++I + G D +R  ++   + G D  +D+   +
Sbjct: 519 HVYFTGIVRDKIGRKMSKQLGNSPDPLDLIAQFGADGMRVAMLLSSSAGNDVMFDEALCE 578

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +    +  N I N         +   D  +        + E      ++ L+++  +  +
Sbjct: 579 Q--GRNFGNKIWNAYRLVNGWTI---DDTLAQSENNRLAIEWFRQALAKTLRQVESDFAS 633

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQ 463
             I  A   +  L      ++D    W L+   P     +   T+E        L  LL 
Sbjct: 634 YRISEAFMNLYKL------FWDDFSGWYLEMIKPAYQCPIDRPTLEATCGFFDDLLRLLH 687

Query: 464 AFVPKLANKIFDIL 477
            F+P +  +I+  L
Sbjct: 688 PFMPFVTEEIWQDL 701



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 51/158 (32%), Gaps = 20/158 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     + DVL R  R+ G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGMLHMGHMLNNTLQDVLVRRARMQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
                           +        + ++           L  S D   RT    ++   
Sbjct: 92  VAKLKAEGIEKSSLSREEFLRHAWDWKEKYGGVILQQLRKLGASCDWE-RTCFTMDEART 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++   ++  + +KG IY+G     +    +   +D+EV
Sbjct: 151 ESVLRVFCDLYEKGLIYRGVRMVNWDPSAQTALSDEEV 188


>gi|161528985|ref|YP_001582811.1| valyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160340286|gb|ABX13373.1| aminoacyl-tRNA synthetase class Ia [Nitrosopumilus maritimus SCM1]
          Length = 771

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 119/388 (30%), Gaps = 20/388 (5%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQW 159
                   + +         +          +E Y    +  +            P +  
Sbjct: 324 ESKGFVEKIEEINHRTPISERSKIPIEIIPMEEYYLKQKDSIEKMRKLGSEITFYPSMHK 383

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK----TFD 215
                +   +S         Y      I      NE               +        
Sbjct: 384 QILMNWLDSISIDWPISRRRYYGTEIPIWYCSSCNEPHVPEPGKYYQPWKEKCPIEKCTK 443

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G             W+D+  + L  T Y  + +    K +P  L    KDI+R    Y 
Sbjct: 444 CGNGEFTGEDRTFDTWMDSSVSPLFVTKYDKDSEF-FEKTYPTSLRPQAKDIVRTWLYYT 502

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +L+   P  +       +  KG K+SKS GN IDP+ VIE+ G D  R++   EI
Sbjct: 503 LLRCDMLTGKKPWTEAWIMGYGLDEKGMKMSKSKGNAIDPLPVIEKFGADTFRFWSASEI 562

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G D   ++  ++        + + N VSR +S         +   G  T  D+ ILS 
Sbjct: 563 NHGYDFRCNEQKIES--TKKFLSKLWN-VSRFLS------SFPVIKEGKPTTVDKWILSE 613

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT-NPDRASTVLYV 450
            + ++++ ++             +           Y +  K     +  + +     +Y 
Sbjct: 614 LNNLIKDCKKGYDEYNFFVPAIAIREFTWNLFAAHYIEMVKKRAYGEGFSEEERDAAIYT 673

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
             +V+  +  LL    P +   ++  L+
Sbjct: 674 LHKVLSTVLKLLAPITPFITEHLWQTLY 701



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   I T   YP+ +P HIG A      D++AR  R++G +V F  G D +G  +    +
Sbjct: 35  DNYTIDTPPPYPSGRPWHIGAAAHYSQIDMIARTARMNGKNVYFPIGIDRNGLPVEFYTE 94

Query: 64  NAGVT-------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                              +  +D        +   L +S D  +  RT  + +    + 
Sbjct: 95  KKHNIRMRETDRGEFLDLCREALDDLEEEMVLIMTNLGLSGDLKNHYRTDSEEYRALTQS 154

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            + K+  +G I        Y         D E+  
Sbjct: 155 TFIKLWKEGKIVLATRPNNYDWVSGTTIADAEIAY 189


>gi|325280528|ref|YP_004253070.1| Valyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312337|gb|ADY32890.1| Valyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 874

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 124/365 (33%), Gaps = 57/365 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F ++    +  LS   +      P + +N         +KD  +SR+   
Sbjct: 349 PIEPKLSMQWFLKMEHLAEIALSPVMNDDIRFFPSKFKNT-YRHWMENIKDWCISRQ-LW 406

Query: 216 WGIKIP------------------------------------DDPQYIMYVWIDALTNYL 239
           WG +IP                                       +  +  W  +    +
Sbjct: 407 WGHRIPAWYLPEGGYVVAYNEEEALRLAREKSHNSNLTIADLRQDEDCLDTWFSSWLWPI 466

Query: 240 TTTGYLDNP-DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    +++P +     ++P +  V G DI+ F    +    +     +P     F+    
Sbjct: 467 SLFDGINHPGNPEINYYYPTNDLVTGPDIIFFWVARMIMAGYEYEGKMPFKNVYFTGIVR 526

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKSLGN  DP+++I++ G D +R  ++     G D  +D+   ++  N     
Sbjct: 527 DKLGRKMSKSLGNSPDPLDLIDKYGADGVRVGMLLCAPAGGDLLFDESLPEQGRN----- 581

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                +  +  ++       I  P     + E    +  +V + +        I  AL  
Sbjct: 582 -FTTKMWNAFKLVKSWEVASIDQPAHSRLALEWFNHLLGKVNETLNTQFDQYRISEALMT 640

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAILLQAFVPKLANK 472
           V +         D    W L+   P     +   T E    V  QL  LL  F+P +  +
Sbjct: 641 VYTTFR------DEFSSWLLEMIKPAYGQPIDRKTYEETLNVFEQLLQLLHPFMPFITEE 694

Query: 473 IFDIL 477
           I+  L
Sbjct: 695 IWQTL 699



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 48/163 (29%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE   I           H+GH     I D L R  RL G +  +  GTD          
Sbjct: 32  SREPYCIVIPPPNVTGVLHMGHMLNNTIQDALVRRARLLGKNACWVPGTDHASIATEAKV 91

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +   +          L  S  +D    T +K   +
Sbjct: 92  VGKLQSEGIKKTDLTRDEFLKHAWDWTHTHGGIILKQLKRLGASCDWDRTAFTMDKERSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + +KG IY+G     +  +     +D+EV    + 
Sbjct: 152 SVLKVFVDLYNKGLIYRGVRMVNWDPKALTALSDEEVVYKEEH 194


>gi|304372814|ref|YP_003856023.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309005|gb|ADM21485.1| Valyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 824

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 72/348 (20%), Positives = 131/348 (37%), Gaps = 46/348 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ + +  +F  +      LL +  S  + +    +  + +      + D ++SR+   W
Sbjct: 347 VEILVQPQWFISMKKLAQNLLEHLNSKDKVLFYPSKFRKTMISWMENVHDWTISRQ-IWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G +I                       + ++  W  +        G+    D  K K++P
Sbjct: 406 GHRIPVWYKNEEIKVQKQNPGAGWIQDEDVLDTWFSSGLTPFVFLGWPQKLDIVK-KYYP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            +L V G DI+ F    +Y+ A  ++   P    +         G+K+SKSLGN IDP+E
Sbjct: 465 TNLLVTGWDIIFFWVARMYFLALEITKKKPFNAVLLHGLIRDMNGKKMSKSLGNGIDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VIEE G D LR  L+     G+D  ++ + L    +  L N + N        I K    
Sbjct: 525 VIEEYGSDVLRATLIFNSTPGQDIKFNIEKLNAAWS--LNNKLWN--------IAKYIKS 574

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
           +          D  IL+  + + + I + M           +   V       Y +  K 
Sbjct: 575 LESKKTKQNFVDLWILNKLTVLNKTISKYMNKYNFSLISKSINEFVFEDFSSWYIELNK- 633

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                          Y   +V++++ I+L  F+P L + +F  +F  +
Sbjct: 634 ----------LHQNGYHLRKVLKKVLIVLHPFIPFLTDYLFKEIFNEE 671



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 18/136 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I         + H+GHA++  + D + RF +L G DVLF    D  G       +
Sbjct: 31  KKPFSIILPPPNVTGKLHLGHAWDSYLQDTIIRFKKLKGYDVLFLPAVDHAGIATQAKVE 90

Query: 64  NA----------------GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
                                   + D+  +N ++    L + +D      T + +  + 
Sbjct: 91  EKLLKQNIKKEDLGRQKFLEKVFEWKDEYYQNIKEQWFKLGLGFDYTKERFTLDPQAQEA 150

Query: 106 CRILWKKISDKGDIYK 121
              ++  +  KG IYK
Sbjct: 151 VSDVFVTLYKKGFIYK 166


>gi|302506711|ref|XP_003015312.1| hypothetical protein ARB_06435 [Arthroderma benhamiae CBS 112371]
 gi|291178884|gb|EFE34672.1| hypothetical protein ARB_06435 [Arthroderma benhamiae CBS 112371]
          Length = 1049

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 77/525 (14%), Positives = 153/525 (29%), Gaps = 89/525 (16%)

Query: 35  ARFHRLDGLDVLFT------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
            R+ +  G+ V             +             +T     +   R   +  + + 
Sbjct: 342 KRYQKFIGMKVKHPFVDRLLPIFADEKVDPEFGTGAVKITPAHDFNDYIRGKENNLEFIS 401

Query: 89  ISYDD--FIRTTEK----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
           I  DD  F          +  D    + +K+ +KG   K   +     +     + D + 
Sbjct: 402 IMNDDGTFNENAGPFAGVKRFDARYQVIEKLKEKGLYVKWENNPMKVPQCA--KSGDVIE 459

Query: 143 KGADGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                Q++      V              +    E  ++R     +      +       
Sbjct: 460 PIMKPQWWMNMTELVKPAIKAVESGEIIIRPESAEKSYYRWMNNINDWCLSRQLWWGHQA 519

Query: 189 PIERRNEVISFVKSGLKDLSLSRKT------------FDWGIKIPDDPQYIMYVWIDALT 236
           P    +           +L ++ +T                  +  DP  ++  W  +  
Sbjct: 520 PAYFVDIEGEKGDDADGNLWVTGRTEEEAKAKAEKKFPGKKFALKRDPD-VLDTWFSSGQ 578

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              +T G+           +P  +   G DIL F    +      ++  +P  K+V+ H 
Sbjct: 579 WPYSTLGWPKKTH-DLENLYPVSILETGWDILFFWVARMIMLGIKMTGQVPF-KEVYCHS 636

Query: 295 FILH-KGEKISKSLGNVIDPIEVI------------------------------------ 317
            I   +G K+SKSLGNV+DPI+V+                                    
Sbjct: 637 LIRDSEGRKMSKSLGNVVDPIDVMNGISLQKLHDKLLEGNLAEKEVAIATKFQKKAFPKG 696

Query: 318 -EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
             E G DALR+ L+     G D  +D   +         N I       +  +  D+   
Sbjct: 697 IPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKFVLGKLGDDFKPQ 754

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
                 G  + S+  IL   ++  +   E ++N+    A   +         D + +  K
Sbjct: 755 ATPIKTGKESLSERWILHKFNQAAKVTNEALENREFSVAANTIYQYWYSQLCDVFIENSK 814

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +P    +        +     L+   +P +  +++  L
Sbjct: 815 SLLQPDADPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 859



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K +E  Y    I  PN     H+GHA    + D + R+ R+ G  VL+  G D  G    
Sbjct: 120 KVKEAGYFVIPIPPPNVTGALHMGHALTKALQDTMIRWQRMKGKTVLYLPGYDHAGISTQ 179

Query: 60  KAAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +     T                   +  +   +       L  S+D      T ++
Sbjct: 180 SVVEKILWKTEKKSRHDIGREAMVGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDE 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+G     + 
Sbjct: 240 NLSAAVTETFVRLHEEGTIYRGNRLVNWC 268


>gi|297620770|ref|YP_003708907.1| isoleucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376071|gb|ADI37901.1| isoleucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 1037

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/448 (14%), Positives = 147/448 (32%), Gaps = 24/448 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D +G+   +  +  G+  K    Q  +  ++M  V+              HH TCR
Sbjct: 341 VCPVDNNGRYTNEIPEYTGMFVKDADKQIIKRLKEMGRVV--------------HHGTCR 386

Query: 108 ILWKKISDKGDIYKGCYSGWYS-----LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
             +                 +      ++D    N+D+++   +          ++   +
Sbjct: 387 HRYPFCWRSDTPLIYKAVSTWFVSVEKIKDAMLANNDKIHWMPEHLKEGRFGKWLEGARD 446

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK-SGLKDLSLSRKTFDWGIKIP 221
                         L   +    ++       EV +  + + L    +   TF    K  
Sbjct: 447 WAISRNRYWGTPIPLWIADDGEIYVAGSIHELEVATNTEITDLHRHFIDDLTFIRNGKTF 506

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
                +   W ++ +       Y  N        +PAD    G D     F+ +   +  
Sbjct: 507 KRIPEVFDCWFESGSMPYAQNHYPFNNRALFESNFPADFIAEGLDQTRGWFYTLTVLSTA 566

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KD 338
           L         V +   +   G K+SK L N  DP++V+++ G DA+R +++   A   +D
Sbjct: 567 LFNKPAFKNVVVNGIVLAEDGNKMSKRLKNYPDPMDVVKKYGADAIRLYMMHSGAVKGED 626

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             + + G++  +                   + D+      P      D  ILS+ +++ 
Sbjct: 627 LRFQEKGVELILRQIFIPFWNAYSFFVTYARIYDWKPSDSYPHPQAVIDRWILSMVNKLN 686

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +++   M    + RA+   I  + ++ + Y    +    ++              +V+  
Sbjct: 687 RDVEAGMDEYNLSRAVEPFIGFIDQLTNWYIRRSRRRFWEEEATRDRDEAFQTLYQVLLA 746

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L  +   FVP +++ I+  L    +   
Sbjct: 747 LTKIAAPFVPFISDAIYRNLRSKGDPES 774



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   +        +    PH GH     I DV+ R+  + G       G D HG  +   
Sbjct: 35  KNHPQFSFYDGPPFATGLPHYGHFLAGTIKDVVLRYKTMKGFYAPRRFGWDCHGLPVEYE 94

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A                     +  V + +  ++D    +   + + +  RT +   
Sbjct: 95  VEKANNLSGSGSIEDFGIAKFNEACRSIVLRYTEEWKDQVKRMGRWVDFGNTYRTMDLNF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K++ +KG +Y+G     +S +     ++ E
Sbjct: 155 MESVWWVFKQLYEKGLVYQGHKVMPFSAKLGTPLSNFE 192


>gi|197294279|ref|YP_001798820.1| valyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853606|emb|CAM11477.1| Valyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 856

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/313 (19%), Positives = 130/313 (41%), Gaps = 17/313 (5%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F    +     ++ E+  ++ +  +        +    +++    ++   G     D   
Sbjct: 381 FYPQRFLKVFNNWLENIEDWCISRQLWWGHPIPIWYKNQEIKAQSESPGEGWVCDCD--- 437

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPAFLLSANL 284
           ++  W  +    L+T G+ +       K +PAD+ V G DIL F    +   +  L+   
Sbjct: 438 VLDTWFSSSLWPLSTLGWPNKKSF-FNKRFPADVLVTGYDILTFWVSKMVLQSSFLTQKD 496

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +       ++G+K+SKS GN +DP+++I + GVDALR+FL+   A G D  YD+ 
Sbjct: 497 PFKDVLLHGLIRDNEGQKMSKSKGNGVDPLDIINKYGVDALRFFLITSAAPGLDLLYDEI 556

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K   N    N + N ++R + +   +           +    ++L+  +   ++I + 
Sbjct: 557 KVKNAWN--FINKLWN-ITRFIKLNT-NTTLDCFEVDKLSLPQTALLTQLASTTEKITQL 612

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            Q   +      +   V E   + + +  K   +  K +        +  V V++ +  L
Sbjct: 613 YQKYELKEIGQILYQFVWENFANWHLEFVKNDLDNYKNDL----NTQFFLVYVMKYILQL 668

Query: 462 LQAFVPKLANKIF 474
           L  F+P + + ++
Sbjct: 669 LHPFIPFVTDALY 681



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +         + H+GHA+  +I D+L RF ++ G +VLF  G D  G    K 
Sbjct: 30  SRKKSFTVVIPPPNVTGKLHLGHAWNNVIQDILIRFKKMQGFEVLFLPGMDHAGIATQKK 89

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + ++ + N R+    L +  D      T +    
Sbjct: 90  VKEHLKKENLLNKDLDKATFLKYAWEWKEKFATNIRNQWKALGLHLDYNFEKFTLDPDLS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            T + ++ K+  +G IY+      +  + +   ++ EV  
Sbjct: 150 KTVQDVFIKLYHQGLIYRDYKIINWDPKSKTALSNVEVNY 189


>gi|195333986|ref|XP_002033667.1| GM21449 [Drosophila sechellia]
 gi|194125637|gb|EDW47680.1| GM21449 [Drosophila sechellia]
          Length = 1049

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 131/426 (30%), Gaps = 99/426 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 453 PICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWY-HWMDGIRDW 511

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 512 CVSRQ-LWWGHRIPAYHVSFTDPSLQAGSNDDEQYWIVARSEAEALTKAAERFGVDASKI 570

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ D        F+P  L   G DIL F    + +  
Sbjct: 571 VLKQDEDVLDTWFSSGIFPFSVFGWPDQTK-DLQTFYPTSLLETGHDILFFWVARMVFFG 629

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 630 QKLLGKLPFKEIYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPR 689

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + +         N + N
Sbjct: 690 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVLG--YRFFCNKLWN 747

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++      + +D  +    A  + D  ILS  +  ++      ++     A +   
Sbjct: 748 ATKFALLYFTGSEKFDTELSASAAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACY 807

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFD 475
           +       D Y +  KP  + ++  +   T    T+ V +     LL  F+P +  +++ 
Sbjct: 808 AFWLYDLCDVYLECLKP--IFQSGSEEQQTAARRTLYVCLDYGLRLLSPFMPFITEELYQ 865

Query: 476 ILFVAD 481
            L  A+
Sbjct: 866 RLPRAN 871



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 130 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 189

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    L  SYD      T + +     
Sbjct: 190 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYEQLKSLGSSYDWSRVAFTMDPKLCRAV 249

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 250 TEAFVRLHEEGSIYRSSRLVNWSC 273


>gi|297583533|ref|YP_003699313.1| leucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297141990|gb|ADH98747.1| leucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 805

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++EK Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TDKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F ++N   FR     L  SY  D  I TT+++++   + ++ ++ +KG 
Sbjct: 88  YALDTGKHPREFTEKNIETFRRQIKSLGFSYDWDREINTTDEKYYKWTQWIFIQLYNKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV +G          +PV+    + +  +++ Y D+LL 
Sbjct: 148 AYMDEVAVNWCPALGTVLANEEVIEGKS----ERGGHPVEKRPMKQWMLKITEYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEDLDWPESIKDMQRNWIGRSE 226



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 41/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D SK + W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNDQALADPSKLREWLPVDIYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P ++++  G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDDILQSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL         +G    + R   + +KD   + P       S E++  V 
Sbjct: 609 LDAAIAWSDNGL---------DGARRFLDRVWRLFVKDDGALSPQIQDAQGS-ETMTKVY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +    +  ++Q++  V+E  +         L K++              
Sbjct: 659 HQTVKKVTEDFKELRFNTGISQLMVFVNEAYK--QEM----LSKSH-------------- 698

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           +     LL    P +A +++  L   +
Sbjct: 699 LEGFLKLLSPVAPHIAEELWSRLGHGE 725


>gi|123968505|ref|YP_001009363.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166231630|sp|A2BR45|SYL_PROMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123198615|gb|ABM70256.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 856

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     A
Sbjct: 41  ENSDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G++  V+  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +
Sbjct: 101 AIERGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKSGLV 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V          A    V+    + +F R++ Y D+LL  
Sbjct: 161 YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGA---VVEKKLLKQWFLRITNYADELLKD 217

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   +       G
Sbjct: 218 LEKLDNWPERVKIMQDNWIGKSIG 241



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 103/317 (32%), Gaps = 66/317 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ +      G +   D              Y ++       + ++   W P D +V G 
Sbjct: 485 INTTCPKCGIGARKETDTMDTFMCSSWYFLRYPSSKCSTKPFEKNEINKWLPVDQYVGGV 544

Query: 266 DILRFHAIYWPAFL--------LSANLPL------------------------------- 286
           +    H +Y   F            + P                                
Sbjct: 545 EHAILHLLYARFFTKALRDNELFDIDEPFKKLLTQGMVQSAAYKNNKTGKYVSPSDITDL 604

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             P     +  +    EK+SKS  N IDP  VI++ G D  R F++ +    KD  +   
Sbjct: 605 SNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDT 664

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++         G    +SR   + +     +     +  + ++S++   +  ++EI  +
Sbjct: 665 DVE---------GQFRFLSRIWKLYINCAKNINSKSNSHPDKEKSLIKSMNIAIKEISND 715

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           + N   + A+++++   + +               +         + ++ ++   ILL  
Sbjct: 716 ILNNQFNTAISELMKFYNSL---------------SNSINDINNNLKIDALKTFCILLAP 760

Query: 465 FVPKLANKIFDILFVAD 481
           F P +A +I+ ++    
Sbjct: 761 FAPHIAEEIWHLIGFKK 777


>gi|121595217|ref|YP_987113.1| valyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607297|gb|ABM43037.1| valyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 976

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 129/382 (33%), Gaps = 86/382 (22%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV 230
             K +    S     +P    N   +   + ++D  +SR+   WG  I    D    +YV
Sbjct: 418 AQKAIDAVASGQVQFVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGNVYV 475

Query: 231 -------------------------WIDALTNYLTTTGYLDNPD---GSKAKFWPADLHV 262
                                    W  +     +T G+ +  D        + P+ + V
Sbjct: 476 ARNEQEAQAQAPGKTLTRDADVLDTWYSSALVPFSTMGWPNQTDGATDDYNLYLPSSVLV 535

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
            G DI+ F    +       +  +P  K V+ HG +L  +G+K+SKS GNV+DP+++I+ 
Sbjct: 536 TGYDIIFFWVARMIMMTTHFTGRVPF-KHVYIHGLVLDAQGKKMSKSEGNVLDPVDLIDG 594

Query: 320 -------------------------------------VGVDALRYFLVREIACGKDGFYD 342
                                                 G DALR+      + G+   +D
Sbjct: 595 IALEPLLDKRTQGLRRPETAPKVRQNTQKEFPEGIPAYGADALRFTFAALASLGRSINFD 654

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDESILSVCS 395
               +     +  N + N  SR V M  + YD  + T    TE       +D  I+S   
Sbjct: 655 SKRCEG--YRNFCNKLWN-ASRFVLMNCEGYDCGMDTAQGCTESYLRFSQADRWIVSQLQ 711

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +V  E+ +      +      +   V     D Y +  K  +++  N  +        + 
Sbjct: 712 QVEAEVAKGFAEFRLDNVANTLYDFVWNEFCDWYLEIAKV-QIQTGNEAQQRATRRTLIR 770

Query: 454 VIRQLAILLQAFVPKLANKIFD 475
           V+  +  L    +P +   ++ 
Sbjct: 771 VLEAILRLAHPVIPFVTEALWQ 792



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R+HR+ G + ++  GTD  G       
Sbjct: 70  GQPAFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAGIATQIVV 129

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    KV+  +       +   R + D +D S + F  T + + 
Sbjct: 130 ERQLQEQGVSRHDLGRPDFVKKVWEWKEKSGNTITTQMRRLGDSVDWSREYF--TMDDKL 187

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + K+  +G IY+G     +  + ++  +D EV              P+
Sbjct: 188 SKVVTDTFVKLYQQGLIYRGKRLVNWDPKLQSAVSDLEVENEEKDGSLWHIAYPL 242


>gi|320169068|gb|EFW45967.1| leucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 905

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 8/199 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K YI     YP+   H+GH     ++D LARFH ++G  VL   G D  G     AA
Sbjct: 97  DSNKRYILAMFPYPSGHLHMGHVRVYTLSDCLARFHAMNGRQVLHPMGWDAFGLPAENAA 156

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV    +  +N    R     L +++D    + T    ++   + ++ ++   G  Y
Sbjct: 157 IERGVAPGEWTIKNIEYMRKQLQRLGMAFDWSKEVTTCAPDYYRWTQWIFLRLLKAGLAY 216

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V    +          V+      +FF++SA+ ++LL   
Sbjct: 217 RKNAVVNWDPVDQTVLANEQV---DENGRSWRSGAVVEQKLLNQWFFKISAFSNELLEGL 273

Query: 181 ESHPEFILPIERRNEVISF 199
               +   P   +    ++
Sbjct: 274 ---DQLAWPESVKQMQRNW 289



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 29/183 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +DP  +I+  G D LR F + +        +D++ +              
Sbjct: 648 EKMSKSKYNGVDPQTMIDRYGADVLRIFTLFKAPPEMALEWDENAIAGS---------RR 698

Query: 361 LVSRSVSMI-LKDYDGMIPTPGAFTESDESILSVC----SRVLQEIRENMQN-QLIHRAL 414
            V+R + ++          TP + +++D  +L       +  ++ I  + ++    + A+
Sbjct: 699 WVNRVIELVETVRQVPREGTPSSVSDADSEVLDQLVFTTNATIKSITNSFEHTFAFNTAV 758

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + ++ L +               K  P R  T    T   +  +  L+    P +A+++F
Sbjct: 759 SDLMKLSN-------------TIKDVPARLHTQPQYT-HAVTTVVQLMAPIAPVVASELF 804

Query: 475 DIL 477
           + L
Sbjct: 805 ERL 807


>gi|313674935|ref|YP_004052931.1| valyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941633|gb|ADR20823.1| valyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 875

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 132/389 (33%), Gaps = 53/389 (13%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           + E     +  +    +  ++      +F ++            +    ++P + +N   
Sbjct: 332 EKEEDYTNNVGHSERTNAVIEPKLSTQWFVKMEELVKPAYENVMNDNIKLIPPKFKNT-Y 390

Query: 198 SFVKSGLKDLSLSRKTFDWG--IKIPDDPQY----------------------------- 226
                 ++D  +SR+   WG  I     P                               
Sbjct: 391 KHWMENVRDWCISRQ-LWWGQRIPAYFMPNGDFVVAQNAEEALKLAKEKTGNQDLKAEDL 449

Query: 227 -----IMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
                ++  W  +    ++    + D  +     ++P +  V G DIL F    +    +
Sbjct: 450 NQDEDVLDTWFSSWLWPISVFDGFKDPDNEDFNYYYPTNDLVTGPDILFFWVARMIIAGY 509

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                LP      +      KG K+SK LGN  D + +I++ G D +R  L+   A G D
Sbjct: 510 EFKGELPFKNVYLTGIVRDDKGRKMSKQLGNSPDALGLIDKHGADGVRVGLLLSAAAGND 569

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +++   ++  N    N I N       + +K+ D    TP    ++ +   +     L
Sbjct: 570 LLFEEKLCEQGWN--FGNKIWNAYRLVEGLEVKEKD----TPIEAMKARDWFEARFQDAL 623

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +EI ++     I  AL     L+ +     Y +  KP   +  + +        T+    
Sbjct: 624 REINDHFSKFRISDALMATYKLIWDDFCSYYLELVKPPYGEAIDKE----TYEATITFFE 679

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRC 485
            +  +L  F+P L  +I+  +   D+  C
Sbjct: 680 DILTILHPFIPFLTEEIWHQITERDDKDC 708



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I           H+GH     I DVL R  R+ G +  +  G D          
Sbjct: 33  KKEPYTIVIPPPNVTGVLHMGHMMNNTIQDVLIRRARMQGKEACWVPGMDHASIATEAKV 92

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       + ++           L  S  +D    T E+    
Sbjct: 93  VNMLKEKGINKNEISRDEFMKHAWEWKEKYGGIILQQLKKLGASCDWDRERFTMEEDMSA 152

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++  +  KG IY+G     +    +    DDEV  
Sbjct: 153 AVIEVFVDLYKKGYIYRGTRMVNWDPEGKTALADDEVNF 191


>gi|291320072|ref|YP_003515330.1| valyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752401|emb|CBH40372.1| Valyl tRNA synthetase (Valine tRNA ligase)(VALRS) [Mycoplasma
           agalactiae]
          Length = 829

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 147/389 (37%), Gaps = 45/389 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
                +           E      E    ++  Y    + PV+ +    +F ++     K
Sbjct: 310 HDLTREQAREQISKYLKENNLIVKEEKTVSNVGYSERSNAPVETLVMPQWFVKMDTLAKK 369

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--------------- 220
           +  + +S  +     +R  + ++     + D ++SR+   WG +I               
Sbjct: 370 VTEHLKSDDQVKFYPKRFIKTVNSWLKNIHDWTISRQ-LWWGHRIPAWYKDNEIKVQVDS 428

Query: 221 ----PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                     ++  W  +     +  G+  + +  K +++P  L V G DI+ F    +Y
Sbjct: 429 PGEGWVQDSDVLDTWFSSGIAPFSFLGWPASDELLK-RYYPTSLLVTGYDIIFFWVVRMY 487

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           +     +   P    +        +  K+SKSL N +DP ++IEE G DALR+FLV    
Sbjct: 488 FFGLEFTGKKPFETVLLHGLVRDEQNRKMSKSLNNGVDPSKIIEEYGSDALRFFLVTNST 547

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D  +  + +  RV   L N + N+  R + M+  D +         + +D  I +  
Sbjct: 548 PGLDTRFLLEKV--RVAWGLCNKLWNIA-RYIDMLDDDSNSKP------SAADIWINNKL 598

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             +  +I + M    +  A  ++ + +       Y +  + +  KK             +
Sbjct: 599 KHLQNKITKAMNRYELTVAGTELSNFIYNDFSSWYIELLRIYPNKK-----------YAL 647

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
           E +R+L I+   F+P + + ++  ++  +
Sbjct: 648 ENLRRLLIIAHPFLPFVTDYLYQSIYKTE 676



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +           HIGHA +  I D + RF +L+G D  +  G D  G       
Sbjct: 33  TKKPFSLLLPPPNVTGALHIGHALDQYIQDTILRFKKLEGYDTFYIAGMDHAGIATQSKV 92

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +   + T                   + ++ +  FR    +L I   ++    T +K  +
Sbjct: 93  ERILMETEGVSKHTLGREKFLERIWEWKEEYANKFRKQWHLLGIGLDFERERFTLDKLSN 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSL 130
           D    ++ ++ ++G IYK   +  +  
Sbjct: 153 DAVNKVFIELYNRGLIYKDTKAVNWDP 179


>gi|153951097|ref|YP_001397796.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166231594|sp|A7H2R6|SYL_CAMJD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152938543|gb|ABS43284.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 809

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    + ++ K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +  +D+    +++V  G          + V   +  GY+ +++AY +KLL   E 
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEKLLKDLEG 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LRDKWPNQVLTMQENWIGKSEGL 229



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             ++ D ++          I  L  R+    +K  + +        + ++         L
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNIKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 399 QEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++  E   Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSEEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|213022927|ref|ZP_03337374.1| methionyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 298

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 26/287 (9%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE-------- 162
           + IS   D  KG +     ++            G + +   A ++P + +E         
Sbjct: 4   RTISQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGAT 63

Query: 163 ------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 E +FF L ++ + L ++  S     L  +  N++  + +SGL+   +SR    +
Sbjct: 64  PVMRDSEHFFFDLPSFSEMLQAWTRSGA---LQEQVANKMQEWFESGLQQWDISRDAPYF 120

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---KAKFWPAD-----LHVIGKDIL 268
           G +IP+ P    YVW+DA   Y+ +   L +  G      ++W  D      H IGKDI+
Sbjct: 121 GFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIV 180

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            FH+++WPA L  ++   P  +F HG++   G K+SKS G  I     ++    D+LRY+
Sbjct: 181 YFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYY 240

Query: 329 LVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
              +++    D   + +   +RVNAD+ N + NL SR+   I K +D
Sbjct: 241 YTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFD 287


>gi|296112744|ref|YP_003626682.1| valyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920438|gb|ADG60789.1| valyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 975

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 110/370 (29%), Gaps = 67/370 (18%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +D           +   I    +    V  G  +  +  K     I +  D   ++  
Sbjct: 424 WMRDIQDWCISRQLWWGHRIPAWYDDNGNVYVGRDESEVRAKYHLGDIPLRQDDD-VLDT 482

Query: 231 WIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--- 282
           W  +     +T  +               F P  + V G DI+ F         +     
Sbjct: 483 WFSSALWTFSTLDWTGQTSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKD 542

Query: 283 -----NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------ 319
                 +P             +G+K+SKS GNV+DPI++I+                   
Sbjct: 543 KDGKPQVPFKTVYVHGLVRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPK 602

Query: 320 -------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                               G DALR+      + G+D  +D   ++     +  N I N
Sbjct: 603 EADNIAKQTRQEFPDGIPAFGTDALRFTYASLASTGRDINFDLKRIEG--YRNFCNKIWN 660

Query: 361 LVSRSVSMILKDYD------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             +R V M   D D           P  +   +  I+S  +  + +I E M         
Sbjct: 661 -ATRFVLMNCIDKDGNPQNIDKSANPKLWQLPEHWIISRLNATINDIHEYMSQYRFDLMS 719

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVP 467
             +   +     D Y +  K              +R + + YV + V+     +    +P
Sbjct: 720 QAIYEFIWNEYCDWYVELAKSSLNASEQDGTVSDERKAQIRYVLLFVLEMAMKMTHPIMP 779

Query: 468 KLANKIFDIL 477
            L  +I+  +
Sbjct: 780 YLTEEIWQTI 789



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++ D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVRLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|171464033|ref|YP_001798146.1| valyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193571|gb|ACB44532.1| valyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 963

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 80/552 (14%), Positives = 161/552 (29%), Gaps = 110/552 (19%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFT--------TGTDEHGQKIAKAAQNAGVTTKV 71
           E ++ DV         R+  L G  V              D              VT   
Sbjct: 236 ETLLGDVAVMVNPEDERYKHLIGKSVNLPLCNRTILIIADDYVDLNFGTGVVK--VTPAH 293

Query: 72  FVDQNSRNFRDMADVLDI-SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
             +  +   R    +++I + D  I       +        +     D+           
Sbjct: 294 DFNDYAVGQRHQLPMINILTLDVKINENAPAAYQGMERFAARKQVVADLEAAGLLEKVQS 353

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
                   D      +    +     +     +  +   S+     L         ++P 
Sbjct: 354 HKLMVPRGDRTQTITEPMLTDQWFVAMSKPSPDNKYQPGSSIAGAALDAVTKGDIKLVPE 413

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGI-------------------------------- 218
              N    +++  ++D  +SR+   WG                                 
Sbjct: 414 NWINTYTQWLE-NIQDWCISRQ-LWWGHQIPAWYGEDGQIFVGRSEEEVKAKAAAAGYTG 471

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
           K+  DP  ++  W  +     ++ G+ D        F P+ + V G DI+ F    +   
Sbjct: 472 KLNRDPD-VLDTWFSSALVPFSSLGWPDETPALN-HFLPSSVLVTGFDIIFFWVARMVMM 529

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------- 319
               +  +P             +G+K+SKS GN +DPI++I+                  
Sbjct: 530 TCHFTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDLIDGIQIEELVGKRTTGLMNP 589

Query: 320 --------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
                                G DALR+      + G++  +D+   +     +  N + 
Sbjct: 590 KQAESISKKTKKEFPDGIPAFGTDALRFTFASLASLGRNINFDQKRCEG--YRNFCNKLW 647

Query: 360 NLVSRSVSMI---------LKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQ 408
           N  +R V M          L   D      G   F+ +D+ I+S   R   ++ +  +N 
Sbjct: 648 N-ATRFVLMNCPGSDEANGLAPCDNQCGPDGYLDFSPADKWIVSQLQRTEADVAKGFENY 706

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
              +  + +   V +   D Y +  K  +L+   P +        + V+  +  L    +
Sbjct: 707 RFDKIASSIYQFVWDEYCDWYLELAKV-QLQTGTPAQQRATRRTLLRVLETILRLAHPLI 765

Query: 467 PKLANKIFDILF 478
           P +   ++  + 
Sbjct: 766 PFITETLWQTVG 777



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    I           H+GHA+   I D L R  R+ G + L+  GTD  G      
Sbjct: 48  EDKGDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRHARMSGKNTLWVPGTDHAGIATQIV 107

Query: 62  AQNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +       +R  R +   +D   + F  T + +
Sbjct: 108 VERQPDAQKVSRHDLGREKFLEKVWEWKETSGNTITRQIRRLGASIDWGKEYF--TMDSK 165

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 166 MSKAVVEVFIRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGSMWHIRYPL 221


>gi|156089121|ref|XP_001611967.1| valyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154799221|gb|EDO08399.1| valyl-tRNA synthetase, putative [Babesia bovis]
          Length = 972

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 72/428 (16%), Positives = 132/428 (30%), Gaps = 93/428 (21%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V++M    ++        + + +  S    ++P    + V       ++D 
Sbjct: 374 PRCSRTGDIVEYMIIPQWYINCKDLAARAMEHVRSGDLTLIPSTYVS-VWEMWLGNIQDW 432

Query: 208 SLSRKTFDWGIKIP----------------------------------------DDPQYI 227
            +SR+   WG +IP                                           + +
Sbjct: 433 CISRQ-LWWGHRIPAYRVISQELDGEAPWVVAHDIQEAEALAKKQYPDLGTFELKQDEDV 491

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +    L+T G+ D       KF+P  L   G DI+ F    +   +  L   LP
Sbjct: 492 LDTWFSSGLFPLSTLGWPDEKHPDFMKFFPTTLLETGNDIIFFWVARMVMMSLHLVGKLP 551

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------------- 319
                        +GEK+SKS GNV+DP+EVIE                           
Sbjct: 552 FNTVYLHPLVRDARGEKMSKSKGNVLDPLEVIEGATLDSLIDKINNSSLPQGEIKKAIVL 611

Query: 320 -----------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
                       G DALR  L+      +    D + +    +    N I N +  ++  
Sbjct: 612 QKQQFPQGIPACGTDALRLGLLSLTRQNRAILLDVNKII--CSKHFGNKIWNALKFTMPK 669

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDR 426
           I +     I +       D  +LS  +  + ++    +N     A+            D 
Sbjct: 670 ITQ-VPMDINSVPCLHWEDRWVLSKLNEYISKVTAAFENYQFGDAVQAAYDFWLYQLCDV 728

Query: 427 YFDAQKPWE-----LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           Y +  KP       +   +  R    +Y           LL   +P +  +++  L   +
Sbjct: 729 YLELIKPRLPSHKDVPTDDLPRVEGAIYALSWSFSIGLRLLHPIMPFITEELYHHL--PE 786

Query: 482 ENRCFQSL 489
             R  +S+
Sbjct: 787 HLRTSESI 794



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 21/158 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +            + HIGHA  + I D LAR+HR+ G   L+  GTD  G       +
Sbjct: 44  KGRWIALLPPPNVTGKLHIGHALTVSIQDCLARWHRMRGDVTLWIPGTDHAGIATQTVVE 103

Query: 64  NAGVTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
              + T+                  + DQ   N +D    +  S D + R   T +    
Sbjct: 104 RMLMQTENKTRHDFSREDFIKRVFQWNDQYGNNIKDQLGRMGASLD-WTRDAFTMDAPRS 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 + ++ + G IY+      +        +D EV
Sbjct: 163 KAVIEAFVRMYNDGFIYRATRLVSWCPHLSTALSDIEV 200


>gi|68492345|ref|XP_710060.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
 gi|46431161|gb|EAK90784.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
          Length = 1119

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 138/439 (31%), Gaps = 63/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R+    ++  K +       +          D        + Y +  ++ K A     
Sbjct: 494 DARYKVIEQLKQKGLFVDQKDNEMTIPVCSRSGDIIEPLLKPQWYVDQKQMAKDAIEVVK 553

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +        E  YF  L   QD  +S                E          +  ++
Sbjct: 554 RGEIVINPKTSEAEYFQWLENIQDWCISRQLWWGHRCPVYFVNIENEQIHDKLDNNYWVA 613

Query: 211 RKTFDWGIKIPDD-----------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +T +   K   +            + ++  W  +    ++T G+ +        F P  
Sbjct: 614 GRTEEEAFKKAQEKFPNKKFTLEQDEDVLDTWFSSGLWPISTLGWPNETK-DMELFNPMS 672

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +   +  L+  +P  K+VF H  +   +G K+SKSLGNV+DP++V
Sbjct: 673 MLETGWDILFFWVSRMILMSIKLTGKVPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDV 731

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +  L   L+      ++                                      
Sbjct: 732 INGIPLQGLHDKLLTGNLDPRELKKATEGQKLSYPNGIPECGTDALRFALCAYSTGGRDI 791

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQ 399
           + D L+        N I       +  + +DY     +   G  +  ++ IL   S   +
Sbjct: 792 NLDILRVEGYRKFCNKIYQATKFVLGRLGQDYIPPTTSELTGKESLVEKWILHKLSHAAK 851

Query: 400 EIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              E+++ +    A   + +      D Y +  K      T P++  +        I   
Sbjct: 852 LTNESLEARNFGDATNHIYNFWYDLCDVYIENSKSLIQDGT-PEQKKSAQDTLYTCIDGA 910

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P +  +++  L
Sbjct: 911 LRLIHPFMPFITEEMWQRL 929



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           HIGHA  + I D L R++R+ G   LF  G D  G     
Sbjct: 188 IKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNRMQGKTTLFIPGFDHAGIATQS 247

Query: 61  AAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         + ++  +  ++    L  SYD      T    
Sbjct: 248 VVEKQIWAKEQKTRHDYGREKFIEKVWEWKEEYHQRIKNQFKKLGSSYDWSREKFTLNPD 307

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   + ++ + G IY+      +S++
Sbjct: 308 LSQAVTEAFVRMHEDGTIYRASRLVNWSVK 337


>gi|304439987|ref|ZP_07399880.1| leucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371479|gb|EFM25092.1| leucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 802

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+ Q  H+GHA      DV++R  RL+G  VLF  G D  G      
Sbjct: 30  NKKKFYALVEFPYPSGQGLHVGHARPYTALDVVSRKRRLEGEQVLFPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K     N +NF+     +  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNKIHPKKVTLDNIKNFKRQLKSIGFSFDWDREIDTTDPEYYKWTQWIFLQLFKHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV     G         V    +  +  +++ Y +KLL  
Sbjct: 150 YKQEMPINWCPSCKVGLANEEVV----GGCCERCGTEVVRKVKSQWMLKITDYAEKLLEG 205

Query: 180 Y 180
            
Sbjct: 206 L 206



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 108/339 (31%), Gaps = 65/339 (19%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P++ ++        E       G   LS   
Sbjct: 415 YKLRDWVFSRQRYWGEPIPIIHCDKCGYVPMDEKDLPLRLPEVENYEPSHDGESPLSHMD 474

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP-----DGSKAKFWPADLHV 262
              +    +   P       M  W    + Y        N            F   D + 
Sbjct: 475 SFVNTTCPVCGGPAKRETDTMPQWA-GSSWYFLRYIDPHNHEALADPKLLDHFLQVDWYN 533

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   +         +    P  K+      +    EK+SKS GNVI+P 
Sbjct: 534 GGMEHTTLHLLYSRFWHRFLYDIGVVPTKEPYKKRTSHGMILGSNSEKMSKSRGNVINPD 593

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDY 373
           +++ E G D LR + +      K   +  +G+K  R   D   G+  L++          
Sbjct: 594 DIVNEYGADTLRTYEMFMGDFEKAAPWSTNGVKGARRFLDRVYGLAELIN---------- 643

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                     +   +++ S+  + ++++ ++ +    + A+A ++SLV+E          
Sbjct: 644 --------GESGYSKNLESLIHKTIKKVTDDYETLKFNTAIAALMSLVNEFYG------- 688

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                           +T +    L ILL    P +  +
Sbjct: 689 -------------QGSITKKDYETLLILLNPVAPHITEE 714


>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 930

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 129/403 (32%), Gaps = 48/403 (11%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ--HNPVQWMEEEGYFFR 168
             +  KG I       W       Y   ++ +   +G    A      V+W+   G    
Sbjct: 386 NMLLGKGTIRHQYAHCWRCKNPIIYRATEQWFASVEGFRQMALEAIKEVEWVPSWGEERI 445

Query: 169 LSAYQDKLLSYYESHPEFILP-----IERRNEVI--------------------SFVKSG 203
            +   D+          + +P       + NE I                     + KS 
Sbjct: 446 HNMVADRQDWCISRQRVWGVPIPIFYCNQCNEHIVNDTTISVVAELFRREGSDAWWAKSA 505

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
            + L         G         IM VW D+ +++                 WPAD+++ 
Sbjct: 506 AEILPQGFACPHCGHGTFRKETDIMDVWFDSGSSHAAVLEERP------ELHWPADMYLE 559

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           G D     F +    A       P    +     +  +G K+SKS+GNVI P EVI++ G
Sbjct: 560 GSDQHRGWFQSSLLTAVASRGRAPYKTVLTHGFVVDGEGRKMSKSIGNVIYPQEVIKQYG 619

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTP 380
            D LR ++        D     D LK+   A++   I N     +  +   D D      
Sbjct: 620 ADILRLWVASADY-KADIRISNDILKQ--MAEVYRKIRNTFRYLIGNLADFDPDRDCVGY 676

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK 438
              TE D   L    RV + + +       H     V +   V     Y D  K      
Sbjct: 677 DQLTELDRWALLRLERVRERVTKAYDEYEFHLLYHTVHNFCAVDLSAIYLDILKDRLYTA 736

Query: 439 T----NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                    A T +Y   E+++ L ++L   +   A +++  +
Sbjct: 737 VPHAIERRAAQTAMY---EILQTLVVMLAPILTFTAEEVWQYM 776



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K  +     Y N   HIG A   I+ D++ ++  L G D  +  G D HG  I  A
Sbjct: 45  KGKPKFVLHDGPPYANGNIHIGTALNKILKDIIVKYKSLRGYDAPYVPGWDTHGLPIEHA 104

Query: 62  AQN-------------AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
           A                    K +  +     R+    L +S  +D+   T    +    
Sbjct: 105 AIKILGLNRHELNPLDLRRQCKEYALKCLDMQREDFKRLGVSGDWDNPYITLTPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ KG IYKG  S ++    E    + E+  
Sbjct: 165 IEVFGEMAKKGYIYKGLKSVYWCTSCETALAEAEIEY 201


>gi|300870124|ref|YP_003784995.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687823|gb|ADK30494.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 853

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 6/250 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     YP+ + H+GH     IAD +AR+++L G D+L   G D  G     AA  
Sbjct: 31  KKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYKLLGYDILHPMGWDAFGMPAENAAIE 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +  +N  N +D  ++L  SY  D  + T    ++   +    K+ +KG +Y+ 
Sbjct: 91  HKTHPAEWTLKNIANMKDQLNLLGYSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +++V         + +   V   + E ++ +++ Y ++L +  + 
Sbjct: 151 GGDVNWCDHCNTVLANEQVTAEGTCWRCDGE---VTKKKLEQWYIKVTDYAEQLDADLKL 207

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
             E   P        +++   +               I       +Y        +    
Sbjct: 208 -LEGYWPDNVIAMQKNWIGRSVGAYINFNLDDGKDFPIFTTRPDTIYGVTYMAIAWNYDG 266

Query: 243 GYLDNPDGSK 252
                    K
Sbjct: 267 LLDMCTPEQK 276



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 110/347 (31%), Gaps = 73/347 (21%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP----- 257
           G   L  S    +        P       +D  T          +    K  F P     
Sbjct: 461 GENPLKKSASFVNTTCPKCGAPAKRETDTMDTFTCSSWYYARYTDAHNDKMPFDPSSANA 520

Query: 258 ---ADLHVIGKDILRFHAIYWPAFL--------LSANLPLP------------------K 288
               D ++ G +    H +Y   +         +  + P                    K
Sbjct: 521 WLGVDQYIGGIEHACMHLLYSRFWYKFMRDIGLIKGDEPFNRLLTQGMVLANSYEAKSLK 580

Query: 289 KVFSHGFILHKG---------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           K ++   + +K                EK+SKS  N +DP E+IE  G DA+R F++   
Sbjct: 581 KFYTQEQMNNKEYEKDGIKKEDIIVKMEKMSKSKANGVDPAEIIELFGADAVRIFVMFVA 640

Query: 334 ACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
              KD  +  +G+K   R    + N              K +D         ++  + + 
Sbjct: 641 PPEKDKEWSDEGVKGSARFLNRIWNLFLKYKDEEAFKNAKSFDY-----NNLSKDGQKLF 695

Query: 392 SVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
              ++ ++++  ++      + A+A ++ L        +     +L   +         +
Sbjct: 696 RKYNKTIKKVTIDIKDRFHFNTAIASLMEL-------LNDMSTIKLANNDD------YAM 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLK 494
             EVIR   ILL    P +  +++ IL       E R  +  +Q  K
Sbjct: 743 FREVIRGYLILLNPIAPHITEELYQILNFGKMIIEERWVEHDEQYCK 789


>gi|315635829|ref|ZP_07891091.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479808|gb|EFU70479.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 821

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK YI +   YP+ + H+GH     I D  AR  R    +VL   G D  G     A
Sbjct: 28  KTKEKKYILSMFPYPSGRIHMGHVRNYCIGDAFARHFRKSDFNVLHPIGWDSFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +  +N    RD    L +S+  +    T+++ +    +    K+ + G I
Sbjct: 88  AIKHKLHPKKWTYENIDYMRDELKSLGLSFSKNREFATSDELYTKWEQEFIIKMYEAGII 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    ++++ +G            V   E  GY+  ++ Y  +LL  
Sbjct: 148 YRKSATVNWCPHDQTVLANEQLEEG----CCWRCGTEVVQKEMPGYYIGITKYAQELLDD 203

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            E    ++   +    E       GL
Sbjct: 204 LEKLKEDWPSQVLTMQENWIGRSEGL 229



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 37/288 (12%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
                       G K   +      ++   W                     + +W   D
Sbjct: 477 HPSWKHCTCPKCGEKATRETDTLDTFVQSSWYFLRYATDNKKWNEVGISKEDSDYWMDVD 536

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F          +++ P  KK+ + G +L  G K+SKS GNV+
Sbjct: 537 QYIGGIEHAILHLLYARFFTKVLRDLGYTNSSEPF-KKLLTQGMVLKDGAKMSKSKGNVV 595

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP  +I++ G D  R F++      K+  ++   ++                      L 
Sbjct: 596 DPDLIIDKYGADTARLFILFAAPPTKELEWNDSAVEGAFR--FIKKFFERAENVNQNGLD 653

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDA 430
           ++          ++ ++         L +  E        +  +A  +  ++ +      
Sbjct: 654 NF--KSIDHSVLSKEEKEARKKVYEALLKSNEVFTKTYTFNTLIASCMEALNAL------ 705

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                       +      +  E    L  +L+  +P    ++   LF
Sbjct: 706 ------------QTQKNDSIWAEGYYILTNILEPIIPHACWELSKRLF 741


>gi|143148|gb|AAA22571.1| transfer RNA-Leu synthetase [Bacillus subtilis]
          Length = 804

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 93/245 (37%), Gaps = 10/245 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKQKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    VF  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRLMKQWMLKINAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E         + +   I   +      ++      + +        I  + +  L+   
Sbjct: 205 LEELDWPESIKDMQRNWIGRSEGAHVHFAIDGHDDSFTV---FTTDQIRCLALHTLSLPR 261

Query: 240 TTTGY 244
            T  +
Sbjct: 262 NTHWW 266



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 42/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+            K + W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRYIDPHNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   + ++D   +         + E++  V 
Sbjct: 609 LDASIAWSESGL---------DGARRFLDRVWRLFIEDSGEL--NGKIVEGAGETLERVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + ++ ++ +    +  ++Q++  ++E  +                       +  E 
Sbjct: 658 HETVMKVTDHYEGLRFNTGISQLMVFINEAYK--------------------ATELPKEY 697

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     LL    P LA ++++ L 
Sbjct: 698 MEGFVKLLSPVAPHLAEELWEKLG 721


>gi|262037397|ref|ZP_06010861.1| leucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748559|gb|EEY35934.1| leucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 894

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 6/206 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +E  Y+    AYP+ + H+GH     I D +AR+ ++ G ++L   G D  G     
Sbjct: 30  VDGKENYYVLEMFAYPSGKLHVGHLRNYAIGDAVARYKKMRGFNILHPFGWDSFGLPAEN 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA + G     +   N  N R    ++ +SY  D  I T    ++   ++ + ++  KG 
Sbjct: 90  AAIDNGAHPGKWTKANIDNMRRQMKLMGLSYDWDREISTYTPEYYKWNQLFFIEMYKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +         +++V    +G+ +      V   E   ++ +++ Y ++LL+
Sbjct: 150 VYKKKSYVNWCPDCNTVLANEQV---ENGKCWRHSKTDVIQKELSQWYLKITDYAEELLT 206

Query: 179 YYES-HPEFILPIERRNEVISFVKSG 203
            +E     +   +    +      +G
Sbjct: 207 GHEELRGHWPEQVLAMQKNWIGKSTG 232



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   ++ K EK+SKS  N +DP E++++ GVD  R F +      K+  ++ +GL     
Sbjct: 629 TGEELVTKVEKMSKSKNNGVDPEEIVKDYGVDPARVFTLFAAPPEKELEWNMNGLAGAYR 688

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEIRENMQ-N 407
               N +  LVS S     K+ +         +   E DE I     + ++++ E+++ +
Sbjct: 689 --FINRLYLLVSDSFEFADKNAEKENNYSIDLSKRNEKDEEIQKKLHQTIKKVTESIEDD 746

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A+A V+ L++++  Y           +   +      +  EV+ ++ +L+  F P
Sbjct: 747 FHFNTAIAAVMELLNDMTAYKQEVIDKNNISSESKK------IWKEVLDKVILLISPFAP 800

Query: 468 KLANKIFDI 476
            +A+++++I
Sbjct: 801 HIADELWEI 809


>gi|157736663|ref|YP_001489346.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980074|sp|A8ERV3|SYL_ARCB4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157698517|gb|ABV66677.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 821

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK YI +   YP+ + H+GH     I D  AR  R    +VL   G D  G     A
Sbjct: 28  KTKEKKYILSMFPYPSGRIHMGHVRNYCIGDAFARHFRKSDFNVLHPIGWDSFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K +  +N    RD    L +S+  +    T+++ +    +    K+ + G I
Sbjct: 88  AIKHKLHPKKWTYENIDYMRDELKSLGLSFSKNREFATSDELYTKWEQEFIIKMYEAGII 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    ++++ +G            V   E  GY+  ++ Y  +LL  
Sbjct: 148 YRKSATVNWCPHDQTVLANEQLEEG----CCWRCGTEVVQKEMPGYYIGITKYAQELLDD 203

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            E    ++   +    E       GL
Sbjct: 204 LEKLKEDWPSQVLTMQENWIGRSEGL 229



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 85/263 (32%), Gaps = 33/263 (12%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF------ 278
           ++   W                     + +W   D ++ G +    H +Y   F      
Sbjct: 502 FVQSSWYFLRYATDNKKWNEVGISKEDSDYWMDVDQYIGGIEHAILHLLYARFFTKVLRD 561

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
               +++ P  KK+ + G +L  G K+SKS GNV+DP  +I++ G D  R F++      
Sbjct: 562 LGYTNSSEPF-KKLLTQGMVLKDGAKMSKSKGNVVDPDLIIDKYGADTARLFILFAAPPT 620

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           K+  ++   ++                      L ++        A ++ ++        
Sbjct: 621 KELEWNDSAVEGAFR--FIKKFFERAENVNQNGLDNF--KSIDHSALSKEEKEARKKVYE 676

Query: 397 VLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            L +  E        +  +A  +  ++ +                  +      +  E  
Sbjct: 677 ALLKSNEVFTKTYTFNTLIASCMEALNAL------------------QTQKNDSIWAEGY 718

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
             L  +L+  +P    ++   LF
Sbjct: 719 YILTNILEPIIPHACWELSKKLF 741


>gi|88607061|ref|YP_505129.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598124|gb|ABD43594.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 837

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+   H+GH    +I DV+ARF R  G  VL   G D  G     AA + G+
Sbjct: 40  YVLSMFPYPSGNIHMGHIRNYVIGDVIARFKRAKGFSVLHPIGWDSFGLPAENAALSYGI 99

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             +++   N  + R     + ISY  D  I T  + ++   +  +      G  Y+    
Sbjct: 100 NPELWTRNNIDSMRTQLKAIGISYNWDREITTCSEDYYKHEQSFFIDFLQNGLAYRKESW 159

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V  G            V+  +   +F R++ Y   LL      P 
Sbjct: 160 VNWDPVDNTVLANEQVIDG----RGWRSGALVERRKLSQWFLRITDYAQSLLDGLNHLPG 215

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   +       G
Sbjct: 216 WPEKVKLMQQRWIGRSEG 233



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 124/386 (32%), Gaps = 76/386 (19%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            +   N      G   Q Y     P+ +  + G            L       +   P+ 
Sbjct: 407 CKQVTNYRLHDWGISRQRYWGCPIPIIYCTQCGIVPVDKKDLPVRLPKDVDFSKGGNPLA 466

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
                   VK  +      R+T  +              + ++   +       +  + S
Sbjct: 467 NHPTW-KHVKCHVCGGDAERETDTF------------DTFFESSWYFAAFCSRQNELNLS 513

Query: 252 KA-KFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKV---FSHGFILHK 299
            + +  P D ++ G +    H +Y             L    P    +            
Sbjct: 514 DSNRILPVDYYIGGIEHAVLHLLYSRFFCRALGKCGHLQIEEPFRNLITQGMVCHTTYQD 573

Query: 300 G-------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
           G                         EK+SKS  NV+DP E++++ G D +R F++ +  
Sbjct: 574 GSGNYLFPKDAEKMAAEGKKVLQGKVEKMSKSKKNVVDPSEILKQYGADTVRLFMLSDTP 633

Query: 335 CGKDGFYDKDGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
             +D  +   G++   R    L   +G+  S S     ++  G           D   LS
Sbjct: 634 PERDIEWTDCGVEGAWRYLERLWKVLGSNTSISTEFNNENVSGK----------DLEFLS 683

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
              ++L  I  ++++  ++ A+A+   + + V   F+  K            S    V  
Sbjct: 684 KVHKLLNGIEGDIEHCRLNCAVAKFREMSNIV---FEMMK-----------CSASNSVIN 729

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
           E +  L  +++ F+P L  K+++I+ 
Sbjct: 730 ESVCILLRVMEPFIPHLTAKLWEIIG 755


>gi|57237973|ref|YP_179222.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73621970|sp|Q5HU13|SYL_CAMJR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57166777|gb|AAW35556.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058532|gb|ADT72861.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 809

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I DVLAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDVLARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|291544322|emb|CBL17431.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Ruminococcus sp. 18P13]
          Length = 802

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  HIGH       D+++R  RL+G +VLF  G D  G      
Sbjct: 30  SKPKFYALVEFPYPSGQGLHIGHPRPYTAMDIVSRKRRLEGYNVLFPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +    N  +F+     L +S+  D  I TT+  +    + ++ ++  KG  
Sbjct: 90  AIKNKIHPAIVTKNNIAHFKAQLQSLGLSFDWDREINTTDPEYFKWTQWIFLQMFKKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +    +    ++EV     G         V    +  +  +++ Y  +LL  
Sbjct: 150 YKKEMSVNWCTSCKVVLANEEVV----GGVCERCGGEVIHKVKSQWMLKITEYAQRLLDD 205

Query: 180 Y 180
            
Sbjct: 206 L 206



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 101/280 (36%), Gaps = 51/280 (18%)

Query: 228 MYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIYWPAFL---- 279
           M  W  +   YL      +        +   + P D +  G +    H +Y   +     
Sbjct: 494 MPQWAGSSWYYLRYCDPKNKECLASKEALDYWMPVDWYNGGMEHTTLHLLYSRFWHKFLY 553

Query: 280 ----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +S   P  ++      +   G+K+SKS GNVI+P EV+ + G D LR + +     
Sbjct: 554 DIGAVSQKEPYMRRTSHGMILGEDGQKMSKSRGNVINPDEVVAQYGADTLRLYEMFIGDF 613

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            K   +    ++         G    + R  ++     DG    P           ++  
Sbjct: 614 EKTAPWSPSSIR---------GCKRFLDRVWALQDMLTDGEEYRPET--------RALMH 656

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + ++++ E+++N   + A+A +++L++E+         + L   N     T+L +     
Sbjct: 657 KTIKKVSEDIENLKFNTAIASMMALINEI---------YALGSINRAELRTLLLLLN--- 704

Query: 456 RQLAILLQAFVPKLANKIF--DILFVADENRCFQSLDQRL 493
                    F P +  +++    L      + + + D  L
Sbjct: 705 --------PFAPHMTEEMYEVQNLGGVLNEQKWPTFDPAL 736


>gi|15828728|ref|NP_326088.1| valyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|81533027|sp|Q98QV4|SYV_MYCPU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14089670|emb|CAC13430.1| VALYL-TRNA SYNTHETASE (VALINE--TRNA LIGASE) (VALRS) [Mycoplasma
           pulmonis]
          Length = 827

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 141/347 (40%), Gaps = 47/347 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ + ++ +F ++  +   +L   ES  +      R  + +    +   D ++SR+   
Sbjct: 346 PIEILVKKQWFVKMDLFSKMVLDSLESKNKVNFYPSRFKKNLEGWMNKTYDWTISRQ-LW 404

Query: 216 WGIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           WG +IP                     DP  ++  W  +     +  G+ +     K ++
Sbjct: 405 WGHQIPAWYKDEQTKVQLNSPGPDWTQDPD-VLDTWFSSAIAPFSFFGWPNTYKKLK-RY 462

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  L V G DI+ F    +Y+       + P    +        +  K++KSLGN IDP
Sbjct: 463 YPTSLLVTGHDIIFFWVSRMYFSGLYFMKDKPFNDVLLHGLIRDEQRRKMTKSLGNGIDP 522

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           + +I++ G D+LR+FL+     G D  Y+++ +K   N    N + N+  R +++     
Sbjct: 523 MVLIDQYGSDSLRWFLITNTTPGLDITYNEEKIKSSWN--FMNKLWNIA-RFINL----- 574

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                   + ++ D  I    ++V   +++ M+         ++   +       Y +  
Sbjct: 575 -QENTKKVSMSKYDYWISDKFNKVESYVKKFMKKYEFTLIGKEIYKFIINDFSSWYLEFS 633

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K    K  +  +          + ++L +LL  F+P L + +F I++
Sbjct: 634 K--ITKNIDFQKV---------IFKRLLLLLHPFIPFLTDHLFKIIY 669



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 18/137 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         Q H+GHA    + D + R+ +L+G DVLF    D  G       
Sbjct: 30  DKKPFSIILPPPNVTGQLHLGHALNGYLQDSVIRYKKLEGYDVLFLPAMDHAGIATQIKV 89

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
           + +                      + D+ +   +   + L ++ D      T ++   D
Sbjct: 90  EESLAKENLLKQDIGREKFLKFSYQWKDKYANIIKSQWNKLGLALDYSSERFTLDQDSKD 149

Query: 105 TCRILWKKISDKGDIYK 121
           T   ++  + + G IY+
Sbjct: 150 TVNKVFIDLYNAGIIYQ 166


>gi|57241991|ref|ZP_00369931.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017183|gb|EAL53964.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 808

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYAIGDALARYYRKMGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+       T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKTWTYENIAYMKKELFSLGFSFSKKRIFATSDPIYTKFEQEFFIKMYEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          + V      GY+ +++AY ++LL   ES
Sbjct: 151 EARVNWCENDQTVLANEQVEDGK----CWRCGHEVSQKVMPGYYVKITAYAEELLKKLES 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKGKWPTQVLTMQENWIGRSEGL 229



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 97/262 (37%), Gaps = 44/262 (16%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLS 281
           W  A       T      +   AK+W   D ++ G +    H +Y   F         L 
Sbjct: 499 WYYARFASDEKTWENVGIEQKSAKYWLGVDEYIGGIEHAILHLLYARFFQKALRDLGYLE 558

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P   ++ + G +L  G K+SKS GNV++P ++I++ G D  R F++      K+  +
Sbjct: 559 DDEPF-SRLLTQGMVLKDGAKMSKSKGNVVNPDDIIKKYGADTARLFILFAAPPAKELEW 617

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + D L+          I  L  R++ +     + +  +    ++ ++         L++ 
Sbjct: 618 NDDALEGA-----YRFIVRLYDRALKLESGALEEI--SQVTLSKEEKYARLKVYEALKKS 670

Query: 402 RENMQN-QLIHRALAQVISLVSEV----DRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +E        +  +A  +  ++ +    ++  +                       E   
Sbjct: 671 QEVYTKSFAFNTLIAACMEALNAIGTCKNQALER----------------------EAFF 708

Query: 457 QLAILLQAFVPKLANKIFDILF 478
            +  +L+  +P +  ++ + LF
Sbjct: 709 IILNILEPIIPHICFELSEKLF 730


>gi|68492340|ref|XP_710062.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
 gi|46431164|gb|EAK90786.1| probable valyl-tRNA synthetase [Candida albicans SC5314]
          Length = 1119

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 138/439 (31%), Gaps = 63/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R+    ++  K +       +          D        + Y +  ++ K A     
Sbjct: 494 DARYKVIEQLKQKGLFVDQKDNEMTIPVCSRSGDIIEPLLKPQWYVDQKQMAKDAIEVVK 553

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +        E  YF  L   QD  +S                E          +  ++
Sbjct: 554 RGEIVINPKTSEAEYFQWLENIQDWCISRQLWWGHRCPVYFVNIENEQIHDKLDNNYWVA 613

Query: 211 RKTFDWGIKIPDD-----------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +T +   K   +            + ++  W  +    ++T G+ +        F P  
Sbjct: 614 GRTEEEAFKKAQEKFPNKKFTLEQDEDVLDTWFSSGLWPISTLGWPNETK-DMELFNPMS 672

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +   +  L+  +P  K+VF H  +   +G K+SKSLGNV+DP++V
Sbjct: 673 MLETGWDILFFWVSRMILMSIKLTGKVPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDV 731

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +  L   L+      ++                                      
Sbjct: 732 INGIPLQGLHDKLLTGNLDPRELKKATEGQKLSYPNGIPECGTDALRFALCAYSTGGRDI 791

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQ 399
           + D L+        N I       +  + +DY     +   G  +  ++ IL   S   +
Sbjct: 792 NLDILRVEGYRKFCNKIYQATKFVLGRLGQDYIPPTTSELTGKESLVEKWILHKLSHAAK 851

Query: 400 EIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              E+++ +    A   + +      D Y +  K      T P++  +        I   
Sbjct: 852 LTNESLEARNFGDATNHIYNFWYDLCDVYIENSKSLIQDGT-PEQKKSAQDTLYTCIDGA 910

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P +  +++  L
Sbjct: 911 LRLIHPFMPFITEEMWQRL 929



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           HIGHA  + I D L R++R+ G   LF  G D  G     
Sbjct: 188 IKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNRMQGKTTLFIPGFDHAGIATQS 247

Query: 61  AAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         + ++  +  ++    L  SYD      T    
Sbjct: 248 VVEKQIWAKEQKTRHDYGREKFIEKVWEWKEEYHQRIKNQFKKLGSSYDWSREKFTLNPD 307

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   + ++ + G IY+      +S++
Sbjct: 308 LSQAVTEAFVRMHEDGTIYRASRLVNWSVK 337


>gi|291460315|ref|ZP_06599705.1| leucine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417070|gb|EFE90789.1| leucine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 806

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +EK Y      YP+    H+GH    +I+D  AR+  + G  V+   G D  G     
Sbjct: 27  TGKEKYYCLDMFPYPSGSGLHVGHWRGYVISDAWARYQLIRGKYVIHPMGWDAFGLPAEN 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+   +   +N  N +     ++    +D  + TT+ + +   + ++ K+ + G 
Sbjct: 87  YAIKMGIHPAITTKKNIENIKRQLKQINALYDWDMELSTTDPKFYKWTQWIFVKMFEHGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+  +   +    +    ++EV  G           PV       +  R++ Y D+LL 
Sbjct: 147 AYEKEFPINWCPSCKTGLANEEVVDGK----CERCGTPVTKKNLRQWMLRITKYADRLLE 202

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + + E I
Sbjct: 203 DLDKLDWPEKVKKMQAEWI 221



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 113/315 (35%), Gaps = 50/315 (15%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDN 247
           E      +G   L+      +    +   P       M  W         Y+      + 
Sbjct: 458 ENYEPTGTGESPLAAIEDWVNCRCPVCGGPAKRETNTMPQWAGSSWYFLRYVDVHNDKEL 517

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH 298
               KA  + P D+++ G +    H +Y   +         +  + P  K          
Sbjct: 518 VSREKADHYLPVDMYIGGVEHAVLHLLYSRFWTKFLYDIGVIGFDEPFRKLFNQGMITGK 577

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P  ++ + G DALR + +       D  +D+ G+         +G+
Sbjct: 578 NGIKMSKSKGNVVSPDALVRDYGCDALRLYELFVGPPELDAEWDERGI---------DGV 628

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R  +++ +         G  + +   +L +  +++ +I +  +N  ++  ++  +
Sbjct: 629 YRFLNRFYNLVQE------SREGELSPT-REMLRIRHQLVHDIEQRFENFSLNTVVSGFM 681

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 +   +  K    ++   DR         E +R  ++LL  F P +A + +  L 
Sbjct: 682 E---HNNSLIELAK----REGGIDR---------ETLRIFSVLLAPFAPHIAEECWHDLG 725

Query: 479 VADE--NRCFQSLDQ 491
                 +  + + D+
Sbjct: 726 GEGTVFSAGWPAFDE 740


>gi|260948602|ref|XP_002618598.1| hypothetical protein CLUG_02057 [Clavispora lusitaniae ATCC 42720]
 gi|238848470|gb|EEQ37934.1| hypothetical protein CLUG_02057 [Clavispora lusitaniae ATCC 42720]
          Length = 1082

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 122/362 (33%), Gaps = 45/362 (12%)

Query: 158 QWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            WME  + +      +       Y    E        N      ++  + L  ++K F  
Sbjct: 537 HWMENIQDWCISRQLWWGHRCPVYYVEIEGKEGDRLDNNYWVAGRTYEEALEKAQKRFPD 596

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                +  + ++  W  +    ++T G+ +       +F P  +   G DIL F    + 
Sbjct: 597 TKFTLEQDEDVLDTWFSSGLWPISTLGWPNQTK-DLERFSPMSMLETGWDILFFWVSRMI 655

Query: 275 WPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
             +  L+   P  K+VF H  +   +G K+SKSLGNV+DP++VI  + +++L   L    
Sbjct: 656 LLSLKLTGKSPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVITGISLESLHEKLKHGN 714

Query: 334 ACGKDG-----------------------------------FYDKDGLKKRVNADLANGI 358
              K+                                      + D L+        N I
Sbjct: 715 LDAKEIEKASAGQKQSYPSGIPECGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKI 774

Query: 359 GNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  +  +  DY         G  +  ++ IL   +   +++  ++  +    A + 
Sbjct: 775 YQATKFVLGRLGADYQPPASAALSGQESLVEKWILHQLTIAARDVNVHLDKREFSEATSA 834

Query: 417 VISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           + +      D Y +  K      T P++  +        I     L+  F+P +  +++ 
Sbjct: 835 IYNFWYDLCDVYIENSKSLIQDGT-PEQQKSAKDTLYTCIDSALKLIHPFMPFVTEEMWQ 893

Query: 476 IL 477
            L
Sbjct: 894 RL 895



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           HIGHA  + I D + R +R+ G   LF  G D  G     
Sbjct: 157 VKKEGVFSIPAPPPNVTGALHIGHALTIAIQDTMIRHNRMRGKTTLFLPGFDHAGISTQS 216

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   + ++     +     L  SYD      T    
Sbjct: 217 VVEKQVWKTEKKTRHDYGREKFVEKVWEWKEEYHARIKSQVKRLGASYDWTREAFTLNPD 276

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   + ++ + G IY+      +S +
Sbjct: 277 LSAAVTEAFVRLHEDGTIYRASRLVNWSTK 306


>gi|312377435|gb|EFR24267.1| hypothetical protein AND_11274 [Anopheles darlingi]
          Length = 877

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 5/181 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I+D +ARF+RL+G +VL   G D  G     A
Sbjct: 23  TDKPKRYVLAMFPYPSGNLHMGHVRVYTISDAMARFYRLNGANVLHPMGWDAFGLPAENA 82

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    +  +N    R   ++L  S+D      T +  ++   + L+  +   G  
Sbjct: 83  AIQRRIPADTWTHRNIAEMRKQLEMLAFSFDWEREFATCDPSYYHWTQQLFLMLFKDGLA 142

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    D++V    D          V+      +F + + +   LL  
Sbjct: 143 YQREAQVNWDPIDQTVLADEQV---DDNGCSWRSGAKVEKKVLRQWFIKTTRFAKPLLEG 199

Query: 180 Y 180
            
Sbjct: 200 L 200



 Score = 40.1 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 38/223 (17%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   +    EK+SKS  N +DP+EV+ + G D LR  L+ ++A      + +  + +  N
Sbjct: 543 TGEPVTLLWEKMSKSKLNGVDPLEVLRQHGCDTLRLILLADVAPTSHRNWSEASMFQEEN 602

Query: 352 ADLAN---------------GIGNLVSRSVSMILKDYDGM--------IPTPGAFTESDE 388
               N               GI N   R    +    +           P    + + + 
Sbjct: 603 PYSFNGRLIKCSPFQHAAFPGILNWQKRIWMTMYDFREIRSKLVAGEGPPLTEEYKQHEH 662

Query: 389 SILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
            +    +        N + +  +   ++++  L +          P  +  +     +  
Sbjct: 663 QLWDARNYFTAGATFNYRHSHQLSVGISKMQGLTNA----IRRVPPEVIAFSRQYELA-- 716

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  +    ++L    P  A +++   F++  NR  Q  +
Sbjct: 717 -------LAAQIVMLAPMAPHFATELWQQ-FLSAPNRATQDTE 751


>gi|189083246|sp|A8FGG0|SYL_BACP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 804

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 7/220 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    +
Sbjct: 28  EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF ++N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYIDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E         + +   I   +       +      + +
Sbjct: 204 DLEDIDWPESIKDMQRNWIGRSEGAHVHFEIEGHDEQFTV 243



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/388 (13%), Positives = 123/388 (31%), Gaps = 45/388 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA-Y 172
              G   +       +  +E    + +V        ++ Q    + +    +    S+  
Sbjct: 381 FLDGLGKEEAIEKVIAWLEEHQKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSSAV 440

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
            ++ L         I P       ++ +K  ++ +           +    PQ+    W 
Sbjct: 441 SEEDLPLILPKTTEIKPSGTGESPLANIKDWVEVVDPVTGKKGRR-ETNTMPQWAGSCW- 498

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+      +     K K W P D+++ G +    H +Y   +         +   
Sbjct: 499 -YFLRYIDPHNSEELASPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 557

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P +++E  G D LR + +          + +
Sbjct: 558 EPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGPLDASIAWSE 617

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            GL         +G    + R   +   +   +       T    ++       + ++ +
Sbjct: 618 TGL---------DGARRFLDRVWRLFTNEDGTISDKVTEQTGG--ALERSYHETVMKVTD 666

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    +  ++Q++  +++  +                       +  E       LL 
Sbjct: 667 HYEGLRFNTGISQLMVFINDAYK--------------------ADTLPKEYAEGFVKLLS 706

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491
              P LA ++++ L     +  +++  Q
Sbjct: 707 PIAPHLAEELWNKLGHEG-SISYEAWPQ 733


>gi|170782133|ref|YP_001710466.1| leucyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189082992|sp|B0RDA6|SYL_CLAMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169156702|emb|CAQ01862.1| leucyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 852

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 5/182 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R + YI     YP+   H+GHA    + D +AR+ R  G +VL   G D  G     AA
Sbjct: 40  SRPRKYILDMFPYPSGDLHMGHAEAFALGDAVARYWRQQGFNVLHPIGWDSFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  + +   N    +       +S+D    + T++  ++   + L+ K+ +KG  Y
Sbjct: 100 IKRGVDPREWTYANIETQKQSMKRYGLSFDWERELHTSDPEYYRWNQWLFLKMHEKGLAY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V          A    V   +   ++ R++ Y D+L+   
Sbjct: 160 RKDSWVNWDPVDQTVLANEQVLPDGTSDRSGA---VVVKKKLTQWYLRITDYADRLVDDL 216

Query: 181 ES 182
             
Sbjct: 217 NQ 218



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 107/312 (34%), Gaps = 43/312 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFW-PADLHV 262
             +  +   G     DP   M  ++D  + Y       ++     D + A  W P D +V
Sbjct: 511 WSNVPSPVDGSPATRDPD-TMDTFMD-SSWYWLRFLSPNDATKAFDPADADRWAPIDQYV 568

Query: 263 IGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y        +    ++   P    + + G +L  G K+SKS G  +D  
Sbjct: 569 GGVEHAILHLLYSRFITKVLFDLGYVTFTEPF-SALLNQGMVLSGGSKMSKSKG-GVDLG 626

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
             ++  GVDA+R  +        D   D + +    +A         ++R+  +     D
Sbjct: 627 SEMDRHGVDAIRLTMAFAGPPEDDI--DWEDVSPSGSAKF-------LARAWRLTG---D 674

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                   +   DE++  V  R L E    ++    +  +A+ + LV+ + +  D     
Sbjct: 675 ITSAPEVEWKTGDEALRRVTHRFLAEAPGMLEAFKFNVVIARTMELVNAIRKTID----- 729

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                 P      +    EV+   A+ L  F P  A  ++  L          ++  D+ 
Sbjct: 730 ----QGPGGGDAAVREATEVV---AVALSLFAPYTAEDMWKRLGREGSVAFAGWRKADRN 782

Query: 493 LKPGFMLHKTFD 504
           L     +     
Sbjct: 783 LLVQTTVTAVVQ 794


>gi|312136980|ref|YP_004004317.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224699|gb|ADP77555.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 931

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 153/410 (37%), Gaps = 46/410 (11%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR---------DEAYYNDDEVYKGADGQY 149
           + +       ++K   +KG +    Y G               +    D           
Sbjct: 372 DPKLEKATNEIYKVEHNKGIMKVEEYDGIPVSEAREKIIERLCKEGKADKLYEFSEIPVI 431

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                N V  + ++ +F + S  + K  +    +   I+P E R + I +    LKD + 
Sbjct: 432 CRCGANCVVKIMKDQWFLKYSNEEWKNKALSCLNQMKIVPDEIR-QNIEYFIKWLKDWAC 490

Query: 210 SRKTFDWGIKIPDDPQYIMYVWID--------------------ALTNYLTTTGYLDNPD 249
           +R     G K+P D ++I+    D                     L +      +L+NPD
Sbjct: 491 AR-KIGLGTKLPWDKRWIVEPLTDSTIYMAYYTIAHKIKEKDHEELNSEYFDEVFLNNPD 549

Query: 250 GSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
              A ++P D  +  KD++  H  +  +    +      PK +   G  L +G+K+S S 
Sbjct: 550 EEFAYWYPLDWRLSAKDLIGNHLTFHIFHHSAIFPEDKWPKGIVVFGMGLLEGQKMSSSK 609

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSV 366
           GN++   E I E G D +R FL+      +D  + K  +   +   +    +   +   +
Sbjct: 610 GNIVTLSEAISEYGADVVRMFLMSSAEPWQDFDWRKKEVIGVKRRIEQFFELYEKIDEKI 669

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVD 425
            +  ++   + P        ++ ILS  ++ ++ + E ++     +AL +   L   +VD
Sbjct: 670 GLNFENKLEIRPKKF----INKWILSQVNQRIKNVTEALEKFQTRKALQEGFFLFRKDVD 725

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            Y    KPW               +   V++    L+  F+P +A +I++
Sbjct: 726 HYLKRVKPWI-------ELEETKEILRYVMKVWVKLVAPFIPHIAEEIWE 768



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 26/168 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++K++I+ A  YP+   H+GH     + DV ARF R+ G +VLF       G  +   A
Sbjct: 26  DKKKIFITVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAPVVGIA 85

Query: 63  Q------------------------NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIR 96
           +                                 V+  S+ ++ +   +  S D     +
Sbjct: 86  KRIERKDPWTLKTYKEVHKVPEDELKKFSDPHYIVEYFSKEYKKIMKKMGYSIDWRREFK 145

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           TT+  +        KK+ + G I KG +   Y    +    D ++ +G
Sbjct: 146 TTDPHYQKFIEWQMKKLKEMGLIRKGTHPVKYCPECQNPVGDHDLLEG 193


>gi|171185143|ref|YP_001794062.1| isoleucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934355|gb|ACB39616.1| isoleucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 977

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 12/265 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                Y+M VW+D+   ++      +      ++ +P D    G D     F+++   A 
Sbjct: 519 WVREPYVMDVWLDSGVAWIAAVD-GERNGELWSRLFPYDFVTEGIDQTRGWFYSLLASAM 577

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P    +     +   G+K+SKS GNVI   ++ E+ G D +R +++ + A  +D
Sbjct: 578 VYVGKAPYKTVLIQGLILDKHGQKMSKSKGNVIWARDLFEKYGADPVRLYILSKAAPWED 637

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAF----TESDESILSV 393
             +D D +K  ++    N + N+V  +   M L  +         +     E D  +LS 
Sbjct: 638 LAFDPDEVKTTISD--LNILWNVVKFADTYMALDGFTAEKYPLEKWLSKALEEDRWLLSE 695

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++++   + M+N   H+A       V E    RY    +     +   D       V 
Sbjct: 696 FNQLVEAFTQYMKNYEFHKAANLWREFVVETLSHRYIRLLRRRVWSEEPSDDKYAAYAVL 755

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
             V++ + +L   F P +A  ++  
Sbjct: 756 HHVLKNVIVLGSIFTPFVAEYLWQA 780



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 65/236 (27%), Gaps = 31/236 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
                     N  PH+GH       DV+ RFHRL G DV    G D  G  +    +   
Sbjct: 43  FAFLEGPPTTNGMPHVGHVRGRTYKDVVLRFHRLLGYDVWPQGGWDMQGMPVEWEVEKRL 102

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------------TTEKRHHDTC 106
              + K         F    + L   Y  + R                  T +  + +  
Sbjct: 103 KLRSKKEVERYGLEQFAKKCNELVEEYLTYWREWGTERLGLWLDVENAYETRQPTYIEYA 162

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP---------- 156
             + KK  ++G + +     W+  R E   +D EV  G + +   + +            
Sbjct: 163 WRVIKKAYERGLLVEDYRVLWFCPRCETSLSDHEVALGYEERRDPSIYVKFRVEGRGDEY 222

Query: 157 -VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
            V W           A        Y              E ++     L  +   R
Sbjct: 223 LVIWTTTPWTLVDNEAVAVHPEYAYAKVEVENGEKWWVAEQLAPRLMELFGIRRWR 278


>gi|318041444|ref|ZP_07973400.1| leucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 885

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 36  EAFYALSMFPYPSGNLHMGHVRNYVITDVVARVQRLRGKKVLHPMGWDAFGLPAENAAIE 95

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    + DQN  + R+  + L   I +D  + T    ++   + L+ +  + G  Y+ 
Sbjct: 96  RGVDPGGWTDQNIASMREQLNQLGLSIDWDREVATCHADYYRWTQWLFLQFLEAGLAYQK 155

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V               V+  +   +F +++ Y  +LL     
Sbjct: 156 DATVNWDPIDQTVLANEQVDSE---GRSWRSGALVEKRKLRQWFLKITDYAQQLLDDLNQ 212

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +           +G
Sbjct: 213 LEGWPERVRTMQANWIGRSTG 233



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 103/325 (31%), Gaps = 68/325 (20%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           +++S        K   D              Y                 W P D +V G 
Sbjct: 486 VNVSCPCCGKPAKRETDTMDTFMCSSWYFLRYSDAKNSQLPFRKDAVDSWLPVDQYVGGI 545

Query: 266 DILRFHAIYWPAFL--------LSANLPL------------------------------- 286
           +    H +Y   F         LS + P                                
Sbjct: 546 EHAILHLLYSRFFTKVLRDRGLLSFDEPFTRLLTQGMVQGITYKNPHTGKYIAPADVADP 605

Query: 287 --PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             P+   S   +    EK+SKS  N +DP  VI++ G D  R F++ +    KD  +D  
Sbjct: 606 TDPRDPVSGEVLETFFEKMSKSKYNGVDPAVVIDKYGADTARMFILFKAPPEKDLEWDDA 665

Query: 345 GLKK--RVNADLANGIGNLVSRSVSMILK--DYDGMIPTPGA------FTESDESILSVC 394
            ++   R    L   + +   R +S+     + D +                ++ +    
Sbjct: 666 DVEGQFRFLQRLWRLVDSACERGLSLAAGAGNADAVAQALAEASASAGLKPDEQELRRAV 725

Query: 395 SRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              + EI +++  +   + A+++++ L +                ++ + +  V     E
Sbjct: 726 HTAITEISDDLDGDYQFNTAVSELMKLSNA-------------MGSHLEGSGEVF--ACE 770

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
            +R L ILL  F P LA +++  L 
Sbjct: 771 ALRNLLILLAPFAPHLAEELWLKLG 795


>gi|163754377|ref|ZP_02161499.1| isoleucyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161325318|gb|EDP96645.1| isoleucyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 1134

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 96/279 (34%), Gaps = 8/279 (2%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y           + +PA+    G D     F+ ++
Sbjct: 595 KPMKRESDLIDVWFDSGSMPYAQWHYPFENKELIDNNENYPANFIAEGVDQTRGWFYTLH 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
               ++  ++     V +   +    +K+SK LGN +DP   +++ G DA R++++    
Sbjct: 655 AIGTMVFDSVAYKNVVSNGLVLDKHAQKMSKRLGNAVDPFTTLDKYGPDATRWYMISNAN 714

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+ +                 +   + ++             E D  ILS
Sbjct: 715 PWDNLKFDLEGIAEVRRKFFGTLYNTYSFFCLYANIDNFSYSEDEIVLAERPEIDRWILS 774

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYV 450
               +++ + +        RA   +   V E   + +    +    K        +    
Sbjct: 775 ELHTLIKNVDQFYAEYEPTRAARAISEFVQENLSNWFVRLSRRRFWKGDYGHDKISAYQT 834

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               +  +A L     P   ++++  L +A     F+S+
Sbjct: 835 LYTCMLTVAKLGAPIAPFYMDRLYKDLTLATTTENFESV 873



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P I H     I D+  R+    G  V    G D HG  +    ++
Sbjct: 41  ESFVFFEGPPSANGLPGIHHVLARAIKDIFCRYKTQKGYQVKRKAGWDTHGLPVELKVES 100

Query: 65  AGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK  +                  + +  + DM       ++ DD   T + ++ ++
Sbjct: 101 ELNITKEDIGKKVSIDEYNEACKKAVMRYTDIWNDMTKRAGYWVNMDDPYITYKPKYMES 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              L K++ DKG +YKG     YS +     +  EV +
Sbjct: 161 VWWLLKQVYDKGLMYKGYTIQPYSPKAGTGLSSHEVNQ 198


>gi|159904700|ref|YP_001548362.1| valyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886193|gb|ABX01130.1| valyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 886

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/469 (16%), Positives = 154/469 (32%), Gaps = 32/469 (6%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
            + G  +         T   +V+++    +   +      +   +   K+  D  + +  
Sbjct: 261 QDFGTGVVMVCTFGDKTDVTWVNRHKLEVKKAINEKGQLTEICGKYAGKKSDDARKEIIS 320

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-NPVQWMEEEGYFFRLS 170
            +  +  + K                  E+  G        +    V+    E  +    
Sbjct: 321 DLISEDYMIKQDPLEQNVGSCWRCKTPIEIIVGDQWFVNVTKLLKEVENAANEISWVPEH 380

Query: 171 AYQDKLLSYYESHPEFIL----------PIERRNEV-----ISFVKSGLKDLSLSRKTFD 215
                L    +   ++ +          P+    +             +     S  T  
Sbjct: 381 MKARLLKWVEDMGWDWCISRQRLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCK 440

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
            G         ++  W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y 
Sbjct: 441 CGNSKLVAETDVLDTWMDSSITPLVIAGWLEDDEFFK-KHYPVQLRPQGHDIIRTWAFYT 499

Query: 276 --PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  ++   P  + V +       G K+SKS GNV++P E+ +  G DALR +     
Sbjct: 500 IVRSLAITGEKPWDEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW-ASNS 558

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESI 390
             GKD  +    ++          I N    +   I  +    + +  +       D  I
Sbjct: 559 TIGKDVPFAWKEVE--YGGRFLRKIWNACKFAKMNISDEVISELKSLKSIEIENPVDLWI 616

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST-- 446
           LS  + ++ ++ +++ N  I+  + ++   +     D Y +  K     K   + A    
Sbjct: 617 LSKLNDLISKVSKDLGNYKINTVV-EIQKFLWHEFCDNYIEMVKHRLYTKEESESAQKEK 675

Query: 447 --VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
               Y   +VI +   LL  F P  A  +  I  + D +  +   D+ L
Sbjct: 676 LMAQYTLYKVITESVKLLTPFTPHFAEIVGQIYEIDDLHISWPVADESL 724



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 15/146 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG       
Sbjct: 32  KRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVKV 91

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
           +     TK                D+N    R     L IS  +D    T    +    +
Sbjct: 92  EELNNITKSDIDRHEFRRLCVELTDENVEKMRGQVKSLGISIDWDREYITMNPDYVRKSQ 151

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDE 133
             + K+ +KG IY+G +   +  R E
Sbjct: 152 TAFLKMYEKGLIYRGKHPVNWCPRCE 177


>gi|242080701|ref|XP_002445119.1| hypothetical protein SORBIDRAFT_07g004420 [Sorghum bicolor]
 gi|241941469|gb|EES14614.1| hypothetical protein SORBIDRAFT_07g004420 [Sorghum bicolor]
          Length = 1056

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 72/420 (17%), Positives = 142/420 (33%), Gaps = 88/420 (20%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +  ++ V+ M +  +F   S+     L    S    I+P +   +   +++  ++D  +
Sbjct: 458 CSRTNDVVEPMIKPQWFVNCSSMAKAGLDAVRSKKIEIIPQQYEQDWYRWLE-NIRDWCV 516

Query: 210 SRKTFD------WGIKIPDDPQY------------------------------------- 226
           SR+ +       W + + DD                                        
Sbjct: 517 SRQLWWGHRIPAWYVTLEDDLDKNLGSNNDRWIVARNESDANLEAQKKYPGTKLRLDQDP 576

Query: 227 -IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            ++  W  +    LT  G+  +    +A F+P  +   G DIL F    +      L  +
Sbjct: 577 DVLDTWFSSGLFPLTVLGWPSDTADLRA-FYPTSVLETGLDILFFWVARMVMMGMQLGGD 635

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +P  K           G K+SKSLGNV+DP+EVI  + +D L   L        +    +
Sbjct: 636 VPFQKVYLHPMIRDAHGRKMSKSLGNVVDPLEVINGMSLDGLLKRLEEGNLDPNELNIAR 695

Query: 344 DGLKK--------------------------RVNADL-----ANGIGNLVSRSVSMILKD 372
           DG KK                          R+N D+          N +  ++   +  
Sbjct: 696 DGKKKDFPDGIAECGTDALRFALISYTSQSDRINLDIKRVVGYRQWCNKLWNAIRFAMGK 755

Query: 373 YDGMIPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
                  P            + ILSV ++ + +   +++   +  A + + S       D
Sbjct: 756 LGDHYIPPATVDVSLMPPICKWILSVLNKAVGKTVTSLEAYKLSDATSAIYSWWQYQLCD 815

Query: 426 RYFDAQKPWELKKTNP-DRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFDILFVADEN 483
            + +A KP+    +   + A      T+ + +     LL  F+P +  +++  L    ++
Sbjct: 816 VFIEAIKPYFFNDSQEFESARAASRDTLWICLETGLRLLHPFMPYVTEELWQRLPQPKDS 875



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 127 STKPPFVIVLPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVV 186

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + DQ      +    L  S D      T +++ 
Sbjct: 187 VEKKLMRERKLTRHDIGRENFISEVLKWKDQYGGTILNQLRRLGASLDWSREAFTMDEQR 246

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +D EV  
Sbjct: 247 SKAVTEAFVRLHKEGLIYRDYRLVNWDCTLRTAISDIEVDH 287


>gi|52081521|ref|YP_080312.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786900|ref|YP_092729.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647431|ref|ZP_08001652.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|60390680|sp|Q65FX8|SYL_BACLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52004732|gb|AAU24674.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349402|gb|AAU42036.1| LeuS [Bacillus licheniformis ATCC 14580]
 gi|317390477|gb|EFV71283.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 804

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 7/220 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF +QN  NFR     L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAVFTEQNIDNFRRQIRALGFSYDWDREVNTTDPDYYKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E         E +   I   +      ++      + +
Sbjct: 204 DLEELDWPESIKEMQRNWIGRSEGAHVHFAVDGTNETFTV 243



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/423 (14%), Positives = 134/423 (31%), Gaps = 63/423 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+         K++   GD+ K  Y+G        + N  +     +      + 
Sbjct: 341 HDERDHEFASAFGLPIKEVVKGGDVEKEAYTGDGEHIHSDFLNGLDKAAAIEKMIQWLEE 400

Query: 155 N----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N             + F    Y  + +           P+      +   K+     S +
Sbjct: 401 NGKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTPVPEEELPLILPKTSEIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVW---IDALTNYLTTTGYLDNPDGSKAKF 255
            ++    IK   +                M  W         Y+      +     K K 
Sbjct: 461 GESPLANIKEWVEVTDPETGKKGRRETNTMPQWAGSCWYFLRYIDPKNPNELASPEKLKE 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFKQLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P E++E  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDEIVETHGADTLRLYEMFMGPLDASIAWSTTGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + D  G+         + E++  V    + ++ ++ +    +  ++Q++  ++E  +
Sbjct: 632 RLFIDDNGGL--NEKIVEGAGETLERVYHETVMKVTDHFEGLRFNTGISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                                  +  E +     LL    P LA ++++ L   +E   +
Sbjct: 690 --------------------ADQLPKEYMEGFVKLLSPVAPHLAEELWNRLG-HEETIAY 728

Query: 487 QSL 489
           ++ 
Sbjct: 729 EAW 731


>gi|148272728|ref|YP_001222289.1| leucyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|189082991|sp|A5CR89|SYL_CLAM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147830658|emb|CAN01594.1| leuS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 851

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 6/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R + YI     YP+   H+GHA    + D +AR+ R  G +VL   G D  G     AA
Sbjct: 40  SRPRKYILDMFPYPSGDLHMGHAEAFALGDAVARYWRQQGFNVLHPIGWDSFGLPAENAA 99

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  + +   N    +       +S+D    + T++  ++   + L+ K+ +KG  Y
Sbjct: 100 IKRGVDPREWTYANIETQKQSMKRYGLSFDWERELHTSDPEYYRWNQWLFLKMHEKGLAY 159

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V          A    V   +   ++ R++ Y D+L+   
Sbjct: 160 RKDSWVNWDPVDQTVLANEQVLPDGTSDRSGA---VVVKKKLTQWYLRITDYADRLVDDL 216

Query: 181 ESHPEFILPIERRNEVISF 199
            +  E   P +  +   ++
Sbjct: 217 -NQLEGTWPAKVISMQRNW 234



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 41/284 (14%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFW-PADLHV 262
             +  +   G     DP   M  ++D  + Y       ++     D + A  W P D +V
Sbjct: 511 WTNVPSPVDGSPATRDPD-TMDTFMD-SSWYWLRFLSPNDATKAFDPADADRWAPIDQYV 568

Query: 263 IGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y        +    ++   P    + + G +L  G K+SKS G  +D  
Sbjct: 569 GGVEHAILHLLYSRFITKVLFDLGYVTFTEPF-SALLNQGMVLSGGSKMSKSKG-GVDLG 626

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
             ++  GVDA+R  +        D   D + +    +A         ++R+  +     D
Sbjct: 627 SEMDRHGVDAIRLTMAFAGPPEDDI--DWEDVSPSGSAKF-------LARAWRLTG---D 674

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                   +   DE++  V  R L E    ++    +  +A+ + LV+ + +  D     
Sbjct: 675 ITSAPEIEWKTGDEALRRVTHRFLAEAPGMLEAFKFNVVIARTMELVNAIRKTID----- 729

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 P      +    EV+   AI L  F P  A  ++  L 
Sbjct: 730 ----QGPGGGDAAVREATEVV---AIALSLFAPYTAEDMWRRLG 766


>gi|256751721|ref|ZP_05492595.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749390|gb|EEU62420.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 932

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 25/309 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 TCECGSTKFRKETDIMDVWFDSGSSHAAVLQTHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 569 QSSLLTSVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    ++ LK+    +    I N     +S +   D D  +       E D+ 
Sbjct: 629 SAD-FTSDMRISQEILKQ--MTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTNPDRAS 445
            L   +RV++E+ E       +  L  V +   V     Y D  K   +    T+ +R  
Sbjct: 686 ALYRLNRVVKELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYPATSKER-R 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------- 498
                   ++  L  L+   +   + +I+  +    +N  F+S+     P          
Sbjct: 745 AAQTTLYIILDTLVRLIAPVLTFTSEEIWSYMKHDSQN-NFESVQLADWPQVQEKYNNPY 803

Query: 499 LHKTFDPIF 507
           + + ++ +F
Sbjct: 804 IIEKWEKLF 812



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V+        + F        +     L +   +D+   T    +    
Sbjct: 105 AIKTLGIKRHEVSPTEFRKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|254578966|ref|XP_002495469.1| ZYRO0B12100p [Zygosaccharomyces rouxii]
 gi|238938359|emb|CAR26536.1| ZYRO0B12100p [Zygosaccharomyces rouxii]
          Length = 886

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++ +YI +   YP+   H+GH    +I+D L RF++ +G  V+   G D  G     AA
Sbjct: 54  SKKNIYILSQFPYPSGALHMGHLRVYVISDSLNRFYKQNGYKVIHPMGWDAFGLPAENAA 113

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+   V+   N    +   + +  +  +D  I T +  ++   ++++ K+ + G  Y
Sbjct: 114 IDRGIDPSVWTKDNISKMKMQMNDMLANFDWDREIATCDPEYYKFTQLIFLKLFEHGLAY 173

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V               V+      +F  ++ +  +L    
Sbjct: 174 RKEAEINWDPVDKTVLANEQVDSN---GCSWRSGAVVEKRLLSQWFLGITKFAPELNHDL 230

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++           G
Sbjct: 231 KYLKDWPSKVKSMQRNWIGESHG 253



 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 79/191 (41%), Gaps = 23/191 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGI 358
           EK+SKS  N +DP + I + G DA+R  ++ +        +D+  +   +R    + N  
Sbjct: 638 EKMSKSKYNGVDPKDCINKYGPDAIRAHILFQAPVSDILNWDETKIVGIERWIQKILNIS 697

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQV 417
             L  R        Y   + TP   T+S+    +   R+LQ + ++  +N  ++  ++  
Sbjct: 698 TTLAGR------NKYGENLKTPSNLTDSEVKFHNEIQRLLQNLTDSFGKNVSLNTVISDY 751

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   +      +     +L             + +  +++L  ++   VP ++ +  +IL
Sbjct: 752 MKFTNA----LETAIKKKLINDE---------LALCNLKKLINVIYPVVPSISEEAREIL 798

Query: 478 FVADENRCFQS 488
               ++  ++S
Sbjct: 799 N-KGQSWHWES 808


>gi|291614869|ref|YP_003525026.1| valyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584981|gb|ADE12639.1| valyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 948

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 124/388 (31%), Gaps = 72/388 (18%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           + +P  W+     +      QD  +S        I      N  +   +   +   L+ K
Sbjct: 389 RFHPENWVNTYNQWLNN--IQDWCISRQLWWGHQIPAWYGVNGEVFVARDEAEARKLADK 446

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G    D    ++  W  +     +T  +           +     P+ + V G DI
Sbjct: 447 AGYAG--QLDRDNDVLDTWFSSALWPFSTLDWEMGKPFDAQNQFVKQYLPSSVLVTGFDI 504

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------ 319
           + F    +      ++  +P             +G+K+SKS GNV+DPI++I+       
Sbjct: 505 IFFWVARMVMMTKHITGKIPFRDVYVHGLIRDAEGQKMSKSKGNVLDPIDLIDGIDLDSL 564

Query: 320 -------------------------------VGVDALRYFLVREIACGKDGFYDKDGLKK 348
                                           G DALR+      + G+D  +D    + 
Sbjct: 565 VKKRTTGLMNPKDAEKIEKRTRKEFPEGITAFGTDALRFTFASLASPGRDIKFDMQRCEG 624

Query: 349 RVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
               +  N + N  +R V M    KD       P  F+ +D+ ++    +   E+  +  
Sbjct: 625 --YRNFCNKLWN-ATRFVLMNCEGKDVGQNESLPLEFSAADKWMIGELQKAEAEMAAHFA 681

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQK-------PWEL-------KKTNP---DRASTV 447
           +     A   V  LV     D Y +  K       P  L       +++NP    +    
Sbjct: 682 DYRFDMAARAVYELVWNTYCDWYVELAKVQLAFPHPNPLPEGEGAIEESNPSILAQQRGT 741

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
               V V+  +  L    +P +  +++ 
Sbjct: 742 RRTLVRVLETILRLAHPIIPFITEELWQ 769



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            ++E   I           H+GH +   + D L R+HR+ G + L+  GTD  G      
Sbjct: 33  SKKENFCIQLPPPNVTGTLHMGHGFNQTLMDALTRYHRMRGDNTLWQPGTDHAGIATQIV 92

Query: 60  -----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K +     ++  R +    D S + F  T ++ 
Sbjct: 93  VERQLDAQGKSRHELGREKFIEKVWEWKEYSGNTITKQMRRLGTSPDWSRERF--TMDEG 150

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR-DEAYYNDDEVYKGADGQYYNAQH 154
              +    + ++ ++G IY+G     +  +   A  + + V +  DG  Y+ Q+
Sbjct: 151 LSRSVTETFVRLFNEGLIYRGKRLVNWDPKLHTAVSDLEVVQEEEDGFMYHIQY 204


>gi|55378488|ref|YP_136338.1| valyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579342|sp|Q5V1H0|SYV_HALMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|55231213|gb|AAV46632.1| valyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 901

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/468 (16%), Positives = 153/468 (32%), Gaps = 35/468 (7%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE       A +  G+ T    +    + R+   +L+          
Sbjct: 316 WYQAHDLPLRLAIDESATMTDVAGEYEGMHTTEAREAIIEDLREEGSLLE---------- 365

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            + H  T ++  +   +   +    +      + E Y       +    +      + ++
Sbjct: 366 SRDHDHTVQVHERCEEEVEYLVTEQWYIELLDKKEEYIEAGRQMEWYPEKMATRYEHWIE 425

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E +    R       +  +Y              E        L D        + G 
Sbjct: 426 GLEWDWCISRQRDSGIPIPVWYCDDCG----EPVMAEREQLPVDPLSDAPPVDSCPECGH 481

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFHAI 273
                 + +   W  +    L   G+  +           + +P DL   G DI+ F   
Sbjct: 482 DSLTPEEDVFDTWATSSLTPLVNAGWDWDADSESFTMELPELYPFDLRPQGHDIISFWLF 541

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    E +SKS GNVI P EV+EE  VDA RY+   
Sbjct: 542 HTVVKCYEHTGEVPFENVMINGMVLDENREAMSKSKGNVIPPSEVLEEFPVDATRYW-AA 600

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             + G D  Y +  L+      L   + N  SR V  +          P      DE +L
Sbjct: 601 GTSIGDDFPYKEGDLEA--GERLLQKLWN-ASRLVDQLT--PAARPDEPEELAAVDEWLL 655

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     ++ +    ++    +A  ++ S       D Y +  K    + ++ +  ST  +
Sbjct: 656 AELDATVESVTAKFEDYEFSKARNELRSFFWNTFCDDYLEIAK---QRLSDGEAVST-EF 711

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
             ++  R    L   F+P +  ++++  +  +E+    + D     G+
Sbjct: 712 TLLQAHRTFLQLFAPFLPHITEELWERCY--EEDSSIHTTDWPTSGGY 757



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 15/143 (10%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  I T     +   H+GH Y+  + D +ARFHR+    V F  G D++G    +  +  
Sbjct: 64  RFSIDTPPPTVSGNLHMGHLYQFTLQDFVARFHRMRDDTVYFPFGYDDNGIASERLTERE 123

Query: 66  ---------GVTTKVFVDQNSRNFRDMAD------VLDISYDDFIRTTEKRHHDTCRILW 110
                        +         F D          + I +D+  +T         ++ +
Sbjct: 124 LDIRHQDYPRREFQEKCRDVCTQFEDEFTQDVQSLAISIDWDNTYKTIAPDVQRVSQLSF 183

Query: 111 KKISDKGDIYKGCYSGWYSLRDE 133
             + ++G  Y+      +    E
Sbjct: 184 LDLYEQGREYRQRAPTIWCPDCE 206


>gi|327403387|ref|YP_004344225.1| Isoleucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318895|gb|AEA43387.1| Isoleucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 1208

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 107/317 (33%), Gaps = 9/317 (2%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P +   E  + +      +         G+ +  +   ++ VW D+         Y  
Sbjct: 637 FTPNDFSKENYAQIDLHKNYMDEITLVSPSGLPMKRESD-LIDVWFDSGAMPYAQWHYPF 695

Query: 247 NPD--GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    K +PAD    G D     F+ ++  A +   ++     + +   +   G K
Sbjct: 696 ENKELIDNRKSYPADFIAEGVDQTRGWFYTLHAIATMCFDSVAFKNVMSNGLVLDKNGLK 755

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +DP E + + G DA R++++       +  +D DG+ +              
Sbjct: 756 MSKSKGNSVDPFETLTKYGPDATRWYMITNAQPWDNLKFDTDGITEVQRKFFGTLYNTYS 815

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  ILS  + ++ ++ E   +    +A   +   
Sbjct: 816 FFALYANIDGFNYSEAEIALDQRPEIDRWILSKLNSLIAQVDEAYASFEPTKAGRLIQDF 875

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           VS+   + Y    +    K        +        +  +AI+     P   +++F  L 
Sbjct: 876 VSDQLSNWYVRLCRRRFWKGDYETDKISAYQTLYTCLEAVAIMGSPIAPFYLDQLFSDLN 935

Query: 479 VADENRCFQSLDQRLKP 495
                    S+   L P
Sbjct: 936 AISGRHSVNSVHLALFP 952



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 23/163 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P I H     I D+  R+  L G  V    G D HG  +    + 
Sbjct: 41  EPFVFFEGPPSANGLPGIHHVMARSIKDIFCRYQTLKGKQVKRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
               TK                      + D  +R   +M   +D+  D +I T E ++ 
Sbjct: 101 ELGITKEDIGKKISVDDYNKACREAVMRYTDIWNRLTVEMGYWVDME-DPYI-TYEPKYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++   L  ++ +K  +YKG     YS       +  E+     
Sbjct: 159 ESVWWLLGQLYEKNLMYKGYTIQPYSPMAGTGLSSHELNMPGC 201


>gi|261749535|ref|YP_003257221.1| isoleucyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497628|gb|ACX84078.1| isoleucyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 1144

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/317 (19%), Positives = 121/317 (38%), Gaps = 15/317 (4%)

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTG 243
            +   P + ++E    +      L         G  +  +P  ++ VW D+         
Sbjct: 566 WKNFTPGDMKDENYEKIDLHKHFLDKVILVSSQGEPMNREPD-LIDVWFDSGAMPYAQFH 624

Query: 244 YLD--NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHK 299
           Y         K  F+PAD    G D     F  ++  + +L  +      + +   +  K
Sbjct: 625 YPFENKNFIDKNFFFPADFIAEGIDQTRGWFFTLHVISSILFNSKAYKNVISTGLVLDEK 684

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G K+SKS GN I+P  +IE+ G DA+R+++V       +  ++   +   VN      + 
Sbjct: 685 GHKMSKSKGNAINPFNLIEDYGPDAIRWYIVFNSEPWDNLKFNIKEIHTGVN-KFFGTLY 743

Query: 360 NLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           N+ S  V     D   Y          TE D  ILS  + +++ + E+  N    +A   
Sbjct: 744 NIYSFFVLYANIDGFSYKEEDCYSEHNTELDFWILSELNTMIKIVDEHYSNYNPTKAARF 803

Query: 417 VISLV--SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           + S V     + Y     ++ W+ K T      +   +  + +  +A L+    P  + +
Sbjct: 804 IFSFVLDKLSNWYVRLCRRRFWKEKYTKSKI--SAYQILYKCLITVAKLISPITPFFSER 861

Query: 473 IFDILFVADENRCFQSL 489
           ++  L    +   F+S+
Sbjct: 862 LYMDLNSVTKKENFESI 878



 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 22/163 (13%)

Query: 2   KEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++   YI        N  P + H     I D+  R+H + G  V+   G D HG  I  
Sbjct: 41  EKKVSTYILYEGPPSLNGSPGLHHMVARTIKDIFCRYHTIKGKKVIRKAGWDTHGLPIEL 100

Query: 61  AAQNAGVTTKVFVDQN--------------SRNFRDMADVLD-ISY-----DDFIRTTEK 100
             +     TK  V +N              + + ++     + I Y     + FI T   
Sbjct: 101 NVEKKMGITKNDVGKNISIEEYNRICKSFVNESMKEWIKFTNKIGYWLDMRNPFI-TYNP 159

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++   L K    K  +YK      YS       +  E+  
Sbjct: 160 KYIESVWWLIKTFYRKKILYKDYTIQPYSPAAGTGLSHHELNM 202


>gi|257386964|ref|YP_003176737.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169271|gb|ACV47030.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 919

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 16/212 (7%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D +AR+ R++G DVL   G D  G     AA     
Sbjct: 38  YVLGMFPYTSGSLHMGHIRNYAITDAVARYRRMNGEDVLHPMGWDAFGLPAENAAYERDT 97

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        RD  + +   YD    I T E  ++   + L+ +  +   +      
Sbjct: 98  DPESWTRTCIEQMRDELERMGFGYDWSREITTCEPEYYRWNQWLFTRFYENDLVEYTGAQ 157

Query: 126 GWYSLRDEAYYNDDEVYKGADG--------------QYYNAQHNPVQWMEEEGYFFRLSA 171
             +    E    D +V +G                          V+  E + +FF ++ 
Sbjct: 158 VNWCPDCETVLADAQVDEGDGHADVRDDTPGHADGEGVCWRCGTAVETRELDQWFFTITD 217

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           Y D+L    ++   +   +          + G
Sbjct: 218 YADELADGLDALDGWPESVREIQRNWIGRREG 249



 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 83/253 (32%), Gaps = 35/253 (13%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANL 284
                YL         +   A  W P D++V G +    H +Y   F        L    
Sbjct: 512 WYFLRYLNPDLSTAPFENEVADDWLPVDVYVGGDEHAVLHLLYIRFFTRALADLGLLDRR 571

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               ++ + G +LH GEK+SKS GN + P E     G +  R F++     G+D  +   
Sbjct: 572 EPVDRLVNQGTVLHGGEKMSKSKGNDVAPHE----YGAETTRLFVLSAAHPGQDFEWTAT 627

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +                     M+L   DG           D  +     R +  + + 
Sbjct: 628 DVSNAY---------EFQQDVYRMVLSFTDGAGGR-TESRPHDAYLEREIDRTIAAVTDE 677

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                 HR + ++      + RY + + P+    +               +R L  LL  
Sbjct: 678 YDRFRFHRVVTELQQFAQLLRRYREYETPYRFAYS-------------RGLRVLTKLLAP 724

Query: 465 FVPKLANKIFDIL 477
             P LA +++  L
Sbjct: 725 LAPYLAEELWSAL 737


>gi|325921199|ref|ZP_08183064.1| valyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548317|gb|EGD19306.1| valyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 1019

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 111/332 (33%), Gaps = 72/332 (21%)

Query: 227 IMYVWIDALTNYLTTTGYLD---NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           ++  W  +     +T G+ D     +    ++ P+ + V G DI+ F    +       +
Sbjct: 528 VLETWFSSQLWPFSTLGWPDANAQIERGFERYLPSSVLVTGFDIIFFWVARMIMATDSFT 587

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV--------------------- 320
             +P      +      +G+K+SKS GNV+DP+++I+ +                     
Sbjct: 588 GQVPFRDVYITGLIRDAQGQKMSKSKGNVLDPLDIIDGISIEALVAKRTTGLMKPKDAPK 647

Query: 321 ----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                           G DALR+ +      G+D  +D         A+      N +  
Sbjct: 648 IEKATRKEFPDGIIAHGADALRFTIAALATHGRDIKFDL------GRAEGYKNFCNKLWN 701

Query: 365 SVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +   +L + +G      P   TE+++ IL+   +V  E   +  N         +     
Sbjct: 702 ATRFVLMNTEGARFNGVPQPRTEAEQWILARLDKVTAETHAHYANYRFDLLTQSLYEFAW 761

Query: 423 --EVDRYFDAQKP--------WELKK--------TNPDRASTVLYVTVEVIRQLAILLQA 464
               D + +  KP          L           + + A++  +  + V+  L  LL  
Sbjct: 762 NAFCDWFLELAKPALNGAVQDSTLAAAGSTPEAIEHAEDAASTRHTLLYVLEALLRLLHP 821

Query: 465 FVPKLANKIFDI----LFVADENRCFQSLDQR 492
             P +  +++      L +       Q+  Q 
Sbjct: 822 LTPFVTEELWQQVAPRLGITAATISLQAFPQA 853



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +           H+GHA++  + D L R+HR+ G D L+  GTD  G         
Sbjct: 34  EPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGFDTLWQVGTDHAGIATEMVVSR 93

Query: 65  A----------------GVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
                            G   KV+  +        R  R +    D S   F  T + + 
Sbjct: 94  NLALEGNGETRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTF--TMDPQP 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + +  ++G IY+G     +    +   +D EV    +  +  +   P+
Sbjct: 152 SAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVEEDGFLWSIRYPL 206


>gi|237752079|ref|ZP_04582559.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376646|gb|EEO26737.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 821

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K YI +   YP+   H+GH     I+D +AR  R DG +VL   G D  G     A
Sbjct: 28  KSLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARKFRKDGYNVLHPIGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N +N +     L  S+     + T +  +    +  +  + +KG I
Sbjct: 88  AIKHKTHPKKWTYSNIKNMKSQLYSLGFSFSKTRELATCDLIYSKWEQSFFIAMWEKGLI 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +G           PV   E   Y+ +++ Y ++LL  
Sbjct: 148 YRKKGFLNWCPNDQTVLANEQVIEGK----CWRCDTPVVQKEMYQYYIKITDYAEELLRD 203

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++   ++   +    +       GL
Sbjct: 204 LDTLEGKWPNQVLTMQKNWIGKSEGL 229



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 84/234 (35%), Gaps = 37/234 (15%)

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEK 302
           +A++W   D ++ G +    H +Y   F           ++ P    + + G +   G K
Sbjct: 530 EARYWMDVDEYIGGIEHAILHLLYARFFTKVLKTLGYTESSEPF-SHLLTQGMVTKDGAK 588

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GNV+DP E+I + G D  R F++      ++  ++   ++              +
Sbjct: 589 MSKSKGNVVDPSEIITQFGADTARLFILFAAPPIRELEWNDSAVEGSYR------FIKRL 642

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQVIS 419
              +  + K       T    +E+++         L++  E          +  +A  + 
Sbjct: 643 CAKIEKVQKITALPKITAENLSEAEKYARKKVYEALKKSYETFTHESGYAFNTLIAACME 702

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++ ++   D  + W                  E    L  +L+  +P +  ++
Sbjct: 703 ALNALNE-QDNVEVWS-----------------EGYFILLNILEPIIPHICWEL 738


>gi|170049395|ref|XP_001855875.1| valyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871251|gb|EDS34634.1| valyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1038

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 125/413 (30%), Gaps = 84/413 (20%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + V+ + +  ++ +             S    I+P             G++D  +
Sbjct: 445 CSRSKDIVEPLIKPQWYVKCDDMAKNATEAVRSGELKIIPETHTKTWY-HWMDGIRDWCV 503

Query: 210 SRKTFD-------------------WGIKIPDDP---------------------QYIMY 229
           SR                       W +   ++                      + ++ 
Sbjct: 504 SRHCGGTSHSGDASKKPTDLDEESLWFVGRNEEEALEKAAKKLGVDKSLLSLKQDEDVLD 563

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +     +  G+ DN D  K  F+P  L   G DIL F    + +    L   LP  
Sbjct: 564 TWFSSGLFPFSVFGWPDNTDDLK-LFYPTSLLETGHDILFFWVARMVFFGQTLLGKLPFK 622

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF------- 340
           +           G K+SKSLGNVIDP++VI  + ++ L   L+      ++         
Sbjct: 623 EVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLEGLHQQLLDSNLDPREIDKAKAGQK 682

Query: 341 ----------------------------YDKDGLKKRVNADLANGIGNLVSRSVSMIL-- 370
                                        + D ++ +      N + N    ++      
Sbjct: 683 QDYPNGIPECGTDAMRFALCAYMTQARDINLDIMRVQGYRFFCNKLWNATRFALMYFTGE 742

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
           + +D +    G+ +  D+ ILS  +  +    +  +      A             D Y 
Sbjct: 743 EKFDVIQTLTGSESTIDQWILSRLANCIDVSNKGFEKYEFALATNACYDFWLYDLCDIYL 802

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +  KP   +  + +  S         +     LL  F+P +  +++  L  AD
Sbjct: 803 ECLKP-TFQSGSEEAKSAARRTLYTCLNLGLKLLSPFMPFITEELYQRLPRAD 854



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 43/146 (29%), Gaps = 19/146 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R +  +           H+GHA    I D + R+HR+ G   L+  G D  G       +
Sbjct: 118 RGQFVMVIPPPNVTGSLHLGHALTNAIEDAITRWHRMKGRTALWVPGCDHAGIATQVVVE 177

Query: 64  NAGVTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                 +                  + ++           L     +D    T + +   
Sbjct: 178 KKLWREQKLNRHDLGREKFIEKIWQWRNEKGDRIYHQLKKLGSSFDWDRACFTMDPKLCR 237

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSL 130
                + ++ + G IY+      +S 
Sbjct: 238 AVTEAFVRMHETGLIYRSSRLVNWSC 263


>gi|114566494|ref|YP_753648.1| isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318441|sp|Q0AYC7|SYI_SYNWW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114337429|gb|ABI68277.1| Isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 927

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 17/302 (5%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           I F K+  + +         G         IM VW D+ ++++            +   W
Sbjct: 497 IWFAKTAAELMPPGCSCEHCGGSTFRKESDIMDVWFDSGSSHMAVLE------PRQELRW 550

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P+D+++ G D     F++    A  +    P  + +     +  +G K+SKSLGNV+DP+
Sbjct: 551 PSDMYLEGSDQHRGWFNSSLSTAVAIRGAAPYREVLTHGFVVDEQGRKMSKSLGNVVDPL 610

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DY 373
            +  E+G D LR ++        D     + +K+   A+    I N     +  +   D 
Sbjct: 611 RMTREMGADILRLWV-SSADYRNDVSVSPNIIKQS--AEAYRKIRNTCRFILGNLFDFDP 667

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQ 431
                +    +E D+  L    ++++ + +  ++   H     + +   V   + YFD  
Sbjct: 668 GKERVSYDKLSELDQWALLKLDKLIRRVTKAYEDYEFHVVFHSMHNFCTVDLSNIYFDIL 727

Query: 432 KPWELKKTNPDRA--STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           K  +L  ++P  A       V  ++I  L ++L   +   + +I+  L    +    Q L
Sbjct: 728 KD-KLYCSHPQDAERKAAQTVLYDIINALVVMLTPILAFSSEEIWSYLKKEGQAESVQLL 786

Query: 490 DQ 491
           + 
Sbjct: 787 EW 788



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 15/170 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  +     Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I + A
Sbjct: 49  GRPQFILHDGPPYANGNIHLGHTLNKVLKDIIVKYRSMSGYDSPYIPGWDTHGLPIEQQA 108

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                               + +  +     ++    L +   ++D   T          
Sbjct: 109 IKNLGIDRHKTDVVEFREHCRDYALKYVEIQKEQFKRLGVRGDWEDPYLTLSPGFESIQI 168

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++    E    + EV              PV
Sbjct: 169 KVFGEMAKKGFIYKGLKPVYWCGDCETALAEAEVEYNEKVSPSIYVKFPV 218


>gi|86140543|ref|ZP_01059102.1| putative valyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832485|gb|EAQ50934.1| putative valyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 877

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 132/394 (33%), Gaps = 57/394 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++    +  +       E  L  ++           ++D ++SR+   W
Sbjct: 350 IEPKLSDQWFLKMKDLAEPAIKAVLESDEVNLFPKKFENTYRHWMENIRDWNISRQ-LWW 408

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 409 GQQIPAYYYGNGQEDFVVAKSREEALEAAKAKTGNTALIDADLRQDEDALDTWFSSWLWP 468

Query: 239 LTTTGYLDNPDG-SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    + NPD      ++P +  V G DIL F    +    +  +   P      +   
Sbjct: 469 MSVFDGVANPDNADFKYYYPTNDLVTGPDILFFWVARMIMAGYEYTGEKPFTNVYLTGLV 528

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  D +++I++ G D +R  L+   + G D  +D+D  ++       
Sbjct: 529 RDAERRKMSKSLGNSPDAMKLIDDYGADGVRVGLLLSASAGNDLLFDEDLCQQG------ 582

Query: 356 NGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            G  N +  +  +I   + D  IP P +  +          +   EI ++     I  AL
Sbjct: 583 KGFVNKIWNAFRLIKGWEVDATIPQPESSEKGLAWYNERFKQATVEIEDHFSKYRISDAL 642

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                LV +       +  KP   K  +      V    +E +     +L  F+P  + +
Sbjct: 643 MTTYKLVWDDFCSWLLEIVKPEYGKPIDKKTFDAV----IEALENNLRILHPFIPFASEE 698

Query: 473 IFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
           I+  +     +E           KP   L   FD
Sbjct: 699 IWQNIATRTPEEALIINEWPAITKPDEALLADFD 732



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++E   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  DKEPYTIVIPPPNVTGILHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKV 91

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDISYDDF-IR-TTEKRHHD 104
                                    + D+      +    L  S D   +R T +     
Sbjct: 92  VAKLKAEGINKSDLTRDEFLKHAWEWTDKYGGTILEQLKKLGASCDWERLRFTMDDTMSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    +  + +KG IY+G +   +    +   +D+EV  
Sbjct: 152 SVIQSFVDLYNKGLIYRGHHMVNWDPEAQTTLSDEEVIH 190


>gi|222111555|ref|YP_002553819.1| valyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221730999|gb|ACM33819.1| valyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 961

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/382 (18%), Positives = 129/382 (33%), Gaps = 86/382 (22%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV 230
             K +    S     +P    N   +   + ++D  +SR+   WG  I    D    +YV
Sbjct: 403 AQKAIDAVASGQVQFVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGNVYV 460

Query: 231 -------------------------WIDALTNYLTTTGYLDNPD---GSKAKFWPADLHV 262
                                    W  +     +T G+ +  D        + P+ + V
Sbjct: 461 ARNEQEAQAQAPGKTLTRDADVLDTWYSSALVPFSTMGWPNQTDGATDDYNLYLPSSVLV 520

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
            G DI+ F    +       +  +P  K V+ HG +L  +G+K+SKS GNV+DP+++I+ 
Sbjct: 521 TGYDIIFFWVARMIMMTTHFTGRVPF-KHVYIHGLVLDAQGKKMSKSEGNVLDPVDLIDG 579

Query: 320 -------------------------------------VGVDALRYFLVREIACGKDGFYD 342
                                                 G DALR+      + G+   +D
Sbjct: 580 IALEPLLDKRTQGLRRPETAPKVRQNTQKEFPEGIPAYGADALRFTFAALASLGRSINFD 639

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-------SDESILSVCS 395
               +     +  N + N  SR V M  + YD  + T    TE       +D  I+S   
Sbjct: 640 SKRCEG--YRNFCNKLWN-ASRFVLMNCEGYDCGMDTAQGCTESYLRFSQADRWIVSQLQ 696

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +V  E+ +      +      +   V     D Y +  K  +++  N  +        + 
Sbjct: 697 QVEAEVAKGFAEFRLDNVANTLYDFVWNEFCDWYLEIAKV-QIQTGNEAQQRATRRTLIR 755

Query: 454 VIRQLAILLQAFVPKLANKIFD 475
           V+  +  L    +P +   ++ 
Sbjct: 756 VLEAILRLAHPVIPFVTEALWQ 777



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R+HR+ G + ++  GTD  G       
Sbjct: 55  GQPAFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAGIATQIVV 114

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    KV+  +       +   R + D +D S + F  T + + 
Sbjct: 115 ERQLQEQGVSRHDLGRPDFVKKVWEWKEKSGNTITTQMRRLGDSVDWSREYF--TMDDKL 172

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + K+  +G IY+G     +  + ++  +D EV              P+
Sbjct: 173 SKVVTDTFVKLYQQGLIYRGKRLVNWDPKLQSAVSDLEVENEEKDGSLWHIAYPL 227


>gi|91092762|ref|XP_973584.1| PREDICTED: similar to isoleucyl tRNA synthetase [Tribolium
           castaneum]
 gi|270014792|gb|EFA11240.1| hypothetical protein TcasGA2_TC010772 [Tribolium castaneum]
          Length = 1207

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 100/261 (38%), Gaps = 10/261 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y          ++PAD    G D     F+ +   +  L    
Sbjct: 527 VFDCWFESGSMPYAQKHYPFEFSKEFDDYFPADFIAEGIDQTRGWFYTLLVISTALFGKA 586

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP+E++ + G DALR +L+       ++  + +
Sbjct: 587 PYKNLIANGLVLASDGQKMSKRKKNYPDPLEIVSKYGADALRLYLINSPVVRAENLRFKE 646

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---DESILSVCSRV 397
           +G++  +        N    L+    S +  +      T  +       D+ ILS    +
Sbjct: 647 EGVRDILKDVFLPWYNAFRFLLQNIESFVQDNNQAFYYTENSVAPENIMDKWILSFTQSL 706

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           L+ +R+ MQ   ++  + ++   +    + Y    +     +   D   T L    EV+ 
Sbjct: 707 LEYVRKEMQLYHLYNVIPRLTKFIDYLTNWYVRMNRKRLKGEGGFDDCKTALLTLFEVLL 766

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            +  ++  F P LA  ++  L
Sbjct: 767 NIVKMMAPFSPFLAETMYQYL 787



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + +        +    PH GH     I DV+ R+    G  V    G D HG  +   
Sbjct: 40  KGKPRFSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQQGFHVERRFGWDCHGLPVEYE 99

Query: 60  -------------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                              K           + D+  R    +   +D   D   +T   
Sbjct: 100 IDKTFDIKGPDDVMKMGIDKYNAECRKIVMRYADEWERIIGRIGRWIDFKNDY--KTLYP 157

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
              ++   ++K++  KG +Y+G     YS       ++ E
Sbjct: 158 TFMESVWWVFKQLYLKGLVYQGNKVMPYSTTCNTPLSNFE 197


>gi|312196235|ref|YP_004016296.1| isoleucyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311227571|gb|ADP80426.1| isoleucyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 1086

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 124/388 (31%), Gaps = 16/388 (4%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H                Y    +    L +E    D    +   G+Y     N V W  
Sbjct: 438 PHCWRCHTPLIYYPLPSWYIRTTAIRDRLVEENAKTDWHPDRIRTGRYGEWLRNNVDWAL 497

Query: 162 EEGYFFRLSAYQDKL------LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               ++       +       L+  ES  E      R    +   +  + D++L      
Sbjct: 498 SRNRYWGTPLPIWRCADDPTHLTCVESLAELSTLTGRDLSALDPHRPFVDDVTLPCPREG 557

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G      P+ ++ VW D+        G          + +PA       D     F+ +
Sbjct: 558 CGGIASRVPE-VIDVWYDSGAMPFAQWGAPHRNQAEFERHYPAQYICEAIDQTRGWFYTM 616

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                L+         +     +   G K+SK +GNV+DP  + E+ G DA+R+ ++   
Sbjct: 617 MAVGTLVFDQSSYETVLCLGLLLDADGRKMSKHIGNVLDPFALFEQHGADAVRWLMLAGG 676

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESI 390
           +   D     + ++  V   L          S+      +D       A  +    D   
Sbjct: 677 SPWSDRRVGHEAIEDIVRKVLLTYWNTASFFSLYASASGWDPATAPGAAPADRPVLDRWA 736

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           LS  +  ++E+ E ++     RA  ++   V ++  ++  +        +PD   T    
Sbjct: 737 LSELAATVREVDEALEKFDTLRAGRRISQFVDDLSNWYVRRSRRRFWAGDPDALDT---- 792

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
               +  +   +  F P L + ++  LF
Sbjct: 793 LYRCLDGVTRAMAPFAPFLTDWLWARLF 820



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT- 69
               N +P  H  H    +  DV  R+  + G  V    G D HG  +  A +     T 
Sbjct: 65  PPTANGKPGAH--HVEARVFKDVFPRYRTMKGYHVPRRAGWDCHGLPVELAVEKELGFTS 122

Query: 70  ----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +  V ++  +F  M + +   +  D   RT +  + ++     +
Sbjct: 123 KSDIEKYGIAEFNARCRESVLRHVADFSAMTERMGYWVDLDGAYRTMDTSYIESVWWSLR 182

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +I DKG + +      Y  RDE   +D EV +G  
Sbjct: 183 QIFDKGLLVEDFRVTPYCPRDETPLSDHEVSQGYK 217


>gi|329922076|ref|ZP_08277857.1| leucine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328942397|gb|EGG38662.1| leucine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 637

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 74/199 (37%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    +
Sbjct: 36  SSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQ 95

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N   FR     L  SY  D  I TT+  ++   + ++ ++  +G 
Sbjct: 96  YAMDTGKHPREFTVLNIDTFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYKRGL 155

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  R++ Y D+LL 
Sbjct: 156 AYVAEVPVNWCEALGTVLANEEVIDGKS----ERGGHPVVRKPMRQWILRITEYADRLLE 211

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + +   I
Sbjct: 212 DLDELDWSESLKDMQRNWI 230



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+    + +     K K W P DL++ G +    H +Y   +    
Sbjct: 499 PQWAGSCW--YYLRYIDPDNHDELCSKEKQKEWLPVDLYIGGVEHAVLHLLYARFWHKVL 556

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K V     + +  EK+SKS GNVI+P +++ E G D LR + +    
Sbjct: 557 YDLGVVDTKEPFQKLVNQGMILGNNNEKMSKSRGNVINPDDIVNEYGADTLRVYEMFMGP 616

Query: 335 CGKDGFYDKDGLKKRVN 351
                 ++ +G++    
Sbjct: 617 LEATKPWNTNGVEGTHR 633


>gi|307266467|ref|ZP_07548002.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918508|gb|EFN48747.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 932

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 25/309 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 TCECGSTKFRKETDIMDVWFDSGSSHAAVLQTHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 569 QSSLLTSVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    ++ LK+    +    I N     +S +   D D  +       E D+ 
Sbjct: 629 SAD-FTSDMRISQEILKQ--MTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTNPDRAS 445
            L   +RV++E+ E       +  L  V +   V     Y D  K   +    T+ +R  
Sbjct: 686 ALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYPATSKER-R 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------- 498
                   ++  L  L+   +   + +I+  +    +N  F+S+     P          
Sbjct: 745 AAQTTLYIILDTLVRLIAPVLTFTSEEIWSYMKHDSQN-NFESVQLADWPQVQEKYNNPY 803

Query: 499 LHKTFDPIF 507
           + + ++ +F
Sbjct: 804 IIEKWEKLF 812



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V+        + F        +     L +   +D+   T    +    
Sbjct: 105 AIKTLGIKRHEVSPTEFRKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|242374049|ref|ZP_04819623.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348239|gb|EES39841.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
          Length = 408

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDELDWPESIKDMQRNWIGRSE 227


>gi|218193568|gb|EEC75995.1| hypothetical protein OsI_13120 [Oryza sativa Indica Group]
          Length = 1061

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 131/385 (34%), Gaps = 47/385 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +  +  +Y    N   W      ++        ++   +          R     +  
Sbjct: 497 IPQQYEQDWYRWLANIRDWCISRQLWWGHRVPAWYVILEDDQEKILGSDNGRWIVARNES 556

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           ++ L      +K      ++  DP  ++  W  +    LT  G+ D+    KA F+P  +
Sbjct: 557 EANL---EAQQKYPGKKFELHQDPD-VLDTWFSSGLFPLTVLGWPDDTADLKA-FYPGSV 611

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DI+ F    +      L  ++P  K           G K+SKSLGNVIDP++VI 
Sbjct: 612 LETGHDIIFFWVARMVMMGMQLGGDVPFEKVYLHPMIRDAHGRKMSKSLGNVIDPVDVIN 671

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKK--------------------------RVNA 352
            + +D L   L        +     +G KK                          ++N 
Sbjct: 672 GISLDGLLKRLKEGNLDPNELKIATEGKKKDFPDGIAECGTDALRFALVSYTSQSDKINL 731

Query: 353 DL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIR 402
           D+          N +  ++   +         P   +        + ILSV ++ + +  
Sbjct: 732 DIKRVVGYRQWCNKLWNAIRFAMGKLGNHYTPPATISVTTMPPICKWILSVLNKAIGKTV 791

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV-IRQL 458
            +++      A + + S       D + +A KP+    +   + A       + V +   
Sbjct: 792 TSLEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQEFESARAASRDALWVCLDTG 851

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
            +LL  F+P +  +++  L    ++
Sbjct: 852 LLLLHPFMPYVTEELWQRLPQPKDS 876



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 50/168 (29%), Gaps = 19/168 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 121 SSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWRRMSGYNALWVPGVDHAGIATQVV 180

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + D+      +    L  S D      T +K  
Sbjct: 181 VEKKLMRERNLTRHDIGREEFVSEVLKWKDEYGGTILNQLRRLGASLDWSRECFTMDKPR 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
                  + ++  +G IY+      +        +D EV +      Y
Sbjct: 241 SKAVTEAFVRLYKQGLIYRDYRLVNWDCTLRTAISDVEVVETFYCVDY 288


>gi|222824044|ref|YP_002575618.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782489|sp|B9KCS8|SYL_CAMLR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222539266|gb|ACM64367.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 809

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYSIGDAMARYYRKKGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HGIHPKKWTYENIDYMQNELASLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          + V   +  GY+ +++AY D+LL   + 
Sbjct: 151 EAEVNWCENDKTVLANEQVEDGK----CWRCGHEVIRKKMPGYYVKITAYADELLQDLKK 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E      +GL
Sbjct: 207 LEGKWPSQVLTMQENWIGKSTGL 229



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 100/288 (34%), Gaps = 41/288 (14%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-------KFWPADLHVIGKDILRFH 271
           K        +  + +  + Y       D     KA        +   D ++ G +    H
Sbjct: 483 KKAQKESDTLDTFFE-SSWYFARFASDDKTWQEKAVDEKSVNYWMNVDEYIGGIEHAILH 541

Query: 272 AIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
            +Y   F         L  + P   ++ + G +   G K+SKS GNV+DP  +IE+ G D
Sbjct: 542 LLYARFFQKALRDLGYLKDDEPF-NRLLTQGMVTKDGAKMSKSKGNVVDPDYIIEKYGAD 600

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           + R F++      K+  ++   L+       A    N +      +       I      
Sbjct: 601 SARLFILFAAPPAKELEWNDSALEG------AFKFINRLYEKAMSLECGKLQEIDHQSLN 654

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
            E   + L V   + +      ++   +  +A  +  ++ ++   + ++           
Sbjct: 655 KEEKYARLKVYEALKKSFEVYEESFAFNTLIAACMEALNALNA-INHKE----------- 702

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                 V+ E    +  +L+  +P +  ++ + LF  +  +  +  D+
Sbjct: 703 ------VSKEAFYIILNILEPIIPHVCFELSEYLFKCENFKVLKIKDE 744


>gi|17864482|ref|NP_524838.1| Valyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|24653289|ref|NP_725259.1| Valyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|7303353|gb|AAF58412.1| Valyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|21627263|gb|AAM68598.1| Valyl-tRNA synthetase, isoform B [Drosophila melanogaster]
          Length = 1049

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 131/426 (30%), Gaps = 99/426 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 453 PICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWY-HWMDGIRDW 511

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 512 CVSRQ-LWWGHRIPAYHVSFTDPSLQTGSNDDEQYWIVARSEAEALTKAAERFGVDASKI 570

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ D        F+P  L   G DIL F    + +  
Sbjct: 571 VLKQDEDVLDTWFSSGIFPFSVFGWPDQTK-DLQTFYPTSLLETGHDILFFWVARMVFFG 629

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 630 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPR 689

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + +         N + N
Sbjct: 690 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVLG--YRFFCNKLWN 747

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++      + +D  +    A  + D  ILS  +  ++      ++     A +   
Sbjct: 748 ATKFALLYFTGSEKFDTELSASAAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACY 807

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFD 475
           +       D Y +  KP  + ++  +   T    T+ V +     LL  F+P +  +++ 
Sbjct: 808 AFWLYDLCDVYLECLKP--IFQSGSEEQQTAARRTLYVCLDYGLRLLSPFMPFITEELYQ 865

Query: 476 ILFVAD 481
            L  A+
Sbjct: 866 RLPRAN 871



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 130 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 189

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    L  SYD      T + +     
Sbjct: 190 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPKLCRAV 249

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 250 TEAFVRLHEEGSIYRSSRLVNWSC 273


>gi|330824243|ref|YP_004387546.1| Valyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329309615|gb|AEB84030.1| Valyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 968

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 115/356 (32%), Gaps = 59/356 (16%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS---RKTFDWGIKIPDDPQYIMYV 230
           ++ ++  +                 + + G   ++ S    +    G  +  D   ++  
Sbjct: 430 NQWMNNIQDWCISRQLWWGHQIPAWYDEDGNVYVARSEAEAQAQAPGRPLRRDED-VLDT 488

Query: 231 WIDALTNYLTTTGYLDNP---DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           W  +     +T G+ D           + P+ + V G DI+ F    +       +  +P
Sbjct: 489 WYSSALVPFSTMGWPDQGESATDDYNLYLPSSVLVTGYDIIFFWVARMIMMTTHFTGRVP 548

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------------- 319
                     +   G+K+SKS GNV+DP+++I+                           
Sbjct: 549 FRHVYIHGLVLDAHGKKMSKSEGNVLDPVDLIDGIALEPLLDKRTQGLRRPETAPTVRKN 608

Query: 320 -----------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
                       G DALR       + G+   +D    +     +  N + N  SR V M
Sbjct: 609 TQKEFPDGIPAYGADALRLTFAALASLGRSINFDSKRCEG--YRNFCNKLWN-ASRFVLM 665

Query: 369 ILKDYDG-------MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             + +D           +   F+++D  I+S   +V  E+ +      +     Q+   V
Sbjct: 666 NCEGFDCGLDATQGCTESYLDFSQADRWIVSRLQKVEAEVAKGFAEYRLDNVANQIYDFV 725

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  K  +++     R        + V+  +  L    +P +   ++ 
Sbjct: 726 WNAFCDWYLEIAKV-QIQTGTEARQRATRRTLIRVLEAILRLAHPIIPFVTEALWQ 780



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA+   I D L R+HR+ G + ++  GTD  G       + 
Sbjct: 63  PAFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAGIATQIVVER 122

Query: 65  AGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       +   R + D +D S + F  T + +   
Sbjct: 123 QLQEQGASRHDLGRPGFVEKVWEWKEKSGNTITTQMRRLGDTVDWSREYF--TMDDKLSR 180

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + K+ ++G IY+G     +    ++  +D EV              P+
Sbjct: 181 VVTETFVKLYEQGLIYRGKRLVNWDPVLQSAVSDLEVENEEKDGSLWHIAYPL 233


>gi|297809613|ref|XP_002872690.1| EMB2369 [Arabidopsis lyrata subsp. lyrata]
 gi|297318527|gb|EFH48949.1| EMB2369 [Arabidopsis lyrata subsp. lyrata]
          Length = 972

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 111 TSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQ 170

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K    +N   FR     L  SY  D  + TTE  ++   + ++ ++  +G 
Sbjct: 171 YAIETGTHPKTTTLKNIDRFRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKRGL 230

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 231 AYQAEVPVNWCPALGTVLANEEVVDG----VSERGGHPVIRKPMRQWMLKITAYADRLLE 286

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 287 DLDELEWPESIKEMQRNWIGRSE 309



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 78/184 (42%), Gaps = 33/184 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P +V+ E G D+LR + +          ++  G++         G+   
Sbjct: 729 KMSKSRGNVVNPDDVVLEHGADSLRLYEMFMGPFRDSKTWNTSGIE---------GVHRF 779

Query: 362 VSRSVSMILK--DYDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
           ++R+  +++     DG        T+ + ++  L    + + ++ E +++   +  ++ +
Sbjct: 780 LARTWRLVIGLPQSDGSFKDGTIVTDDEPTLEQLRTLHKCIAKVTEEIESTRFNTGISGM 839

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + LV+   ++    +P                    +I    +LL  + P +A +++  L
Sbjct: 840 MELVNAAYKW--NNQPRR------------------IIEPFVLLLSPYAPHMAEELWSRL 879

Query: 478 FVAD 481
              +
Sbjct: 880 GHPN 883


>gi|227358201|ref|ZP_03842542.1| isoleucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227161537|gb|EEI46574.1| isoleucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 936

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 79/494 (15%), Positives = 153/494 (30%), Gaps = 50/494 (10%)

Query: 34  LARF-HRLDGLDVLFTTGTD---EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           L RF H   G DV    G     + G      A   G    V   +      +       
Sbjct: 302 LLRFNHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDFVIGQKYGLEVANPVGPNGC 361

Query: 90  SYDDFIRTTE-KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVY 142
              +   T +         ++ + + +KG +                     +    + +
Sbjct: 362 YLPNTYPTLDGVFVFKANDVIVELLKEKGALLHHEAMQHSYPCCWRHKTPVIFRATPQWF 421

Query: 143 KGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEV 196
            G D      Q       V+W+ + G     S  +++          +  P+      E 
Sbjct: 422 IGMDKNGLRQQSLKEIKGVKWIPDWGQARIESMVENRPDWCISRQRTWGTPMSLFVHKET 481

Query: 197 ISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ----------------YIMYVWIDALTNYL 239
                  L+ +    K  +  GI+   D                    + VW D+ + + 
Sbjct: 482 QEPHPRTLELMEEVAKRVEVSGIQAWWDLDIRELLGDEADDYMKTPDTLDVWFDSGSTHS 541

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T         G+      ADL++ G D     F +    +  +    P  + +     + 
Sbjct: 542 TVVDARPEFHGNS-----ADLYLEGSDQHRGWFMSSLMISTAIKGKAPYREVLTHGFTVD 596

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKS+GN + P +V+ ++G D LR ++      G+    D+     + +AD    
Sbjct: 597 GQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEIAVSDE---ILKRSADTYRR 653

Query: 358 IGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           I N   R     L  +D       P      D   +       ++I ++ +N   H  + 
Sbjct: 654 IRNTA-RFFLANLNGFDPAKHQVKPEEMVILDRWAVGRAKAAQEDILKHYENYDFHNVIQ 712

Query: 416 QVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +++   S      Y D  K  +   K++     +       +I  L   +   +   A++
Sbjct: 713 RLMQFCSVEMGSFYLDIIKDRQYTAKSDSVARRSCQTALYHIIEALVRWMAPIMSFTADE 772

Query: 473 IFDILFVADENRCF 486
           I+  L        F
Sbjct: 773 IWAQLPGERAKFVF 786



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQIVGKPGEKVSAAQFREECRKYAYEQIEAQKKDFIRLGVLGDWDKPYLTMDYKTEANT 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I   G + KG     +     +   + EV  
Sbjct: 166 IRALARIIANGHLLKGAKPVHWCTACGSSLAEAEVEY 202


>gi|126137401|ref|XP_001385224.1| valyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126092446|gb|ABN67195.1| valyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 1051

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 136/438 (31%), Gaps = 62/438 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R     ++  K +  +    +          D        + + N  E+ K A     
Sbjct: 430 DARTVVIEQLKEKGLFVEQKDNEMTIPLCSRSGDVIEPLLKPQWWVNQQEMAKDAIAAVK 489

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N          E  YF+ +   QD  +S                E     +        +
Sbjct: 490 NGDLTITPKTSESEYFYWMENIQDWCISRQLWWGHRCPVYFVVVEGEEGDRLDNNYWIAA 549

Query: 211 RKTFDW---------GIKIPDDPQY-IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           R   +          G+K   +    ++  W  +    ++T G+ +        F P  +
Sbjct: 550 RSHEEALEKAQKKFAGVKFTLEQDEDVLDTWFSSGLWPISTLGWPNATR-DMELFNPMSM 608

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI 317
              G DIL F    +   +  L+  +P  K+VF H  +   +G K+SKSLGNVIDP++VI
Sbjct: 609 LETGWDILFFWVSRMILLSLKLTGKVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVI 667

Query: 318 EEVGVDALRYFLVREIACGKDG-----------------------------------FYD 342
             + +  L   L       ++                                      +
Sbjct: 668 AGIPLQGLHDKLKVGNLDPRELQKATDGQKLSYPNGIPECGTDALRFALCAYSTGGRDIN 727

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQE 400
            D L+        N I       +  + +D+         G  +  ++ IL   ++   +
Sbjct: 728 LDILRVEGYRKFCNKIYQATKFVLGRLGEDFKPAETPAKTGNESLVEKWILYKLTQATAK 787

Query: 401 IRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
             + ++N+    A   + +      D Y +  K      T  ++  +        I    
Sbjct: 788 TNKAIENRDFGDATNHIYNFWYDLCDVYIENSKALIQDGT-AEQKKSAQDTLYTCIDSSL 846

Query: 460 ILLQAFVPKLANKIFDIL 477
            L+  F+P +  +++  L
Sbjct: 847 RLIHPFMPFVTEEMWQRL 864



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G   LF  G D  G       +   
Sbjct: 133 FTIPAPPPNVTGALHIGHALTVSIQDALIRYYRMKGKTTLFLPGFDHAGIATQSVVEKQI 192

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T          
Sbjct: 193 WAKEKKTRHDYGREKFVEKVWEWKEEYHSRIKNQFKKLGASYDWTREAFTLNPDLSAAVT 252

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ D G IY+      +S +
Sbjct: 253 EAFVRMHDDGTIYRATRLVNWSTK 276


>gi|326389978|ref|ZP_08211541.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994038|gb|EGD52467.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 932

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 25/309 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 TCECGSTKFRKETDIMDVWFDSGSSHAAVLQTHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 569 QSSLLTSVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    ++ LK+    +    I N     +S +   D D  +       E D+ 
Sbjct: 629 SAD-FTSDMRISQEILKQ--MTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTNPDRAS 445
            L   +RV++E+ E       +  L  V +   V     Y D  K   +    T+ +R  
Sbjct: 686 ALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYPATSKER-R 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------- 498
                   ++  L  L+   +   + +I+  +    +N  F+S+     P          
Sbjct: 745 AAQTTLYIILDTLVRLIAPVLTFTSEEIWSYMKHDSQN-NFESVQLADWPQVQEKYNNPY 803

Query: 499 LHKTFDPIF 507
           + + ++ +F
Sbjct: 804 IIEKWEKLF 812



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V+        + F        +     L +   +D+   T    +    
Sbjct: 105 AIKTLGIKRHEVSPTEFRKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|282164212|ref|YP_003356597.1| valyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156526|dbj|BAI61614.1| valyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 813

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 124/366 (33%), Gaps = 24/366 (6%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL---- 188
           E +       +  D +              E    R   + + L   +    +       
Sbjct: 350 EFFVTPQWFIRILDIKDELLAQGAKLKWYPEHMKIRYDTWINGLKWDWCISRQRYFGVPF 409

Query: 189 PIERRNEVISFVKSGLKDLSLS-------RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
           PI    +  +   +    L +              G    +  + +M  W  +    L  
Sbjct: 410 PIWYCKKCGAVALAEDSQLPVDPLVTQPLHPCKKCGSIEFEPEKDVMDTWATSSVTPLIN 469

Query: 242 TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHK 299
             + +       K +P +L     +I+R    Y    ++L +  LP    + S   +   
Sbjct: 470 ANWGEPGSIID-KMYPMNLRPQSHEIIRTWLFYTVIKSYLHTKTLPWYDIMISGQGLDPN 528

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+ + KS GN+++P+  +++   DA+R++       G D  + +  +         N + 
Sbjct: 529 GKAMHKSKGNIVEPLPFVQKYSADAVRWW-AASAKLGDDLAFKEKEIV--YGQKFINKLF 585

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           N  SR  S+ LKDY    P        D+ +L+  + V++E  EN +     +A +    
Sbjct: 586 N-ASRFASIHLKDY---KPREPELELIDKWLLTKLNDVIRESTENFERYEYSKAKSLTEQ 641

Query: 420 LVS--EVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                  D Y +  K    +K  N +     LY     +     LL  F+P +   ++  
Sbjct: 642 FFWGDFCDNYLEIVKDRLYRKAENGESGQAALYTVYMALFNSLKLLGPFIPHITEDLYQR 701

Query: 477 LFVADE 482
           LF   E
Sbjct: 702 LFRETE 707



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I T     +   H+GH      A+ +AR+ R+ G +V +  G D++G    + 
Sbjct: 33  SKKPTYSIDTPPPTLSGYIHMGHVLSYSQAEFVARYQRMQGKNVFYPMGFDDNGLPTERF 92

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTC 106
            +                       +    N+R++   L IS D      T  +R     
Sbjct: 93  VEKKYKVNIRKVGREEFVRLCLKETEIGGANYRNVWTTLGISVDWGLLYSTINERCQRIS 152

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  +  I + G + +      +    E
Sbjct: 153 QRSFIDIFNMGRMERRNEPAIWCPLCE 179


>gi|197283930|ref|YP_002149802.1| isoleucyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|254782426|sp|B4F2T5|SYI_PROMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|194681417|emb|CAR40255.1| isoleucyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 936

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 79/494 (15%), Positives = 153/494 (30%), Gaps = 50/494 (10%)

Query: 34  LARF-HRLDGLDVLFTTGTD---EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           L RF H   G DV    G     + G      A   G    V   +      +       
Sbjct: 302 LLRFNHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDFVIGQKYGLEVANPVGPNGC 361

Query: 90  SYDDFIRTTE-KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVY 142
              +   T +         ++ + + +KG +                     +    + +
Sbjct: 362 YLPNTYPTLDGVFVFKANDVIVELLKEKGALLHHEAMQHSYPCCWRHKTPVIFRATPQWF 421

Query: 143 KGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEV 196
            G D      Q       V+W+ + G     S  +++          +  P+      E 
Sbjct: 422 IGMDKNGLRQQSLKEIKGVKWIPDWGQARIESMVENRPDWCISRQRTWGTPMSLFVHKET 481

Query: 197 ISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ----------------YIMYVWIDALTNYL 239
                  L+ +    K  +  GI+   D                    + VW D+ + + 
Sbjct: 482 QEPHPRTLELMEEVAKRVEVSGIQAWWDLDIRELLGDEADDYMKTPDTLDVWFDSGSTHS 541

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           T         G+      ADL++ G D     F +    +  +    P  + +     + 
Sbjct: 542 TVVDARPEFHGNS-----ADLYLEGSDQHRGWFMSSLMISTAIKGKAPYREVLTHGFTVD 596

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKS+GN + P +V+ ++G D LR ++      G+    D+     + +AD    
Sbjct: 597 GQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEIAVSDE---ILKRSADTYRR 653

Query: 358 IGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           I N   R     L  +D       P      D   +       ++I ++ +N   H  + 
Sbjct: 654 IRNTA-RFFLANLNGFDPAKHQVKPEEMVILDRWAVGRAKAAQEDILKHYENYDFHNVIQ 712

Query: 416 QVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
           +++   S      Y D  K  +   K++     +       +I  L   +   +   A++
Sbjct: 713 RLMQFCSVEMGSFYLDIIKDRQYTAKSDSVARRSCQTALYHIIEALVRWMAPIMSFTADE 772

Query: 473 IFDILFVADENRCF 486
           I+  L        F
Sbjct: 773 IWAQLPGERAKFVF 786



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQIVGKPGEKVSAAQFREECRKYAYEQIEAQKKDFIRLGVLGDWDKPYLTMDYKTEANT 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I   G + KG     +     +   + EV  
Sbjct: 166 IRALARIIANGHLLKGAKPVHWCTACGSSLAEAEVEY 202


>gi|157413338|ref|YP_001484204.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980079|sp|A8G4T7|SYL_PROM2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157387913|gb|ABV50618.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 856

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K Y  +   YP+   H+GH    +I D++ARFHR  G  VL   G D  G     A
Sbjct: 41  ENSDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFHRFKGKSVLHPMGWDAFGLPAENA 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G++  V+  QN  + R    +L +S  +D    T ++ ++   + L+ ++   G +
Sbjct: 101 AIERGISPSVWTKQNISHMRSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLV 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V          A    V+    + +F R++ Y D+LL  
Sbjct: 161 YQKESEVNWDPVDNTVLANEQVDSEGKSWRSGA---VVEKKLLKQWFLRITNYADELLKD 217

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E    +   ++   +       G
Sbjct: 218 LEKLDNWPERVKIMQDNWIGKSIG 241



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 105/323 (32%), Gaps = 68/323 (21%)

Query: 203 GLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
           G  +  ++      GI  K   D              Y ++       +  +   W P D
Sbjct: 479 GDNNHWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSKCSNKPFEKIEINKWLPVD 538

Query: 260 LHVIGKDILRFHAIYWPAFL--------LSANLPL------------------------- 286
            +V G +    H +Y   F            + P                          
Sbjct: 539 QYVGGVEHAILHLLYARFFTKALRDNELFEIDEPFKKLLTQGMVQAAAYKNNKTGKYVSP 598

Query: 287 --------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   P     +  +    EK+SKS  N IDP  VI++ G D  R F++ +    KD
Sbjct: 599 SDINDLSNPTDPIDNTKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKD 658

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +    ++         G    ++R   + +     +     ++ + ++S++   +  +
Sbjct: 659 LEWGDTDVE---------GQFRFLNRIWKLYINCAKDINSKSNSYPDREKSLIKSMNIAI 709

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +EI  ++ N   + A+++++   + +    +                    + +E ++  
Sbjct: 710 KEISNDILNNQFNTAISELMKFYNSLANSINDVN---------------NTLKIEALKTF 754

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
            ILL  F P +A +I+ ++    
Sbjct: 755 CILLAPFAPHIAEEIWHLIGFKK 777


>gi|149181484|ref|ZP_01859980.1| leucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850885|gb|EDL65039.1| leucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 804

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F ++N   FR     L  SY  D  + TT+ +++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTEKNINTFRRQIKSLGFSYDWDREVNTTDPKYYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMRQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEDVDWPESIKDMQRNWIGRSE 226



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/411 (13%), Positives = 132/411 (32%), Gaps = 62/411 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +      K++   GD+ K  Y+G     +  + N     +G        + 
Sbjct: 341 HDERDYEFAKKYDLPIKEVVAGGDVEKEAYTGDGEHVNSDFLNGLGKEEGITKAIEWLEK 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             V           + F    Y  + +            +      ++  K+     S +
Sbjct: 401 EGVGEKKTTYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPVEELPLTLPKTTEIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++           
Sbjct: 461 GESPLANISEWVNVTDPATGKKGRRETNTMPQWAGSCWYYLRYIDPHNDEALASEENLNH 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQRLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P E++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDEIVSTHGADTLRMYEMFMGPLEASVAWSENGL---------DGSRRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +++ +   +  +     E ++ +     + ++++ E+ +    +  ++Q++  +++  +
Sbjct: 632 RLLVDENGNI--SEKVKDEENKDLEKSYHQTVKKVTEDFEGLRFNTGISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                                  +  E I     LL    P +A +++  L
Sbjct: 690 --------------------ADVLPKEYIEGFVKLLAPVTPHIAEELWSKL 720


>gi|194017807|ref|ZP_03056416.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010459|gb|EDW20032.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 830

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 7/210 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    +
Sbjct: 54  EDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF ++N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YALDTGNDPAVFTEENINNFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGL 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 174 AYIDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 229

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLS 208
             E         + +   I   +       
Sbjct: 230 DLEDIDWPESIKDMQRNWIGRSEGAHVHFE 259



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 123/388 (31%), Gaps = 45/388 (11%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA-Y 172
              G   +       +  +E    + +V        ++ Q    + +    +    S+  
Sbjct: 407 FLDGLGKEEAIEKVIAWLEEHQKGEKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSSAV 466

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
            ++ L         I P       ++ +K  ++ +           +    PQ+    W 
Sbjct: 467 SEEELPLILPKTTEIKPSGTGESPLANIKDWVEVVDPVTGKKGRR-ETNTMPQWAGSCW- 524

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+      +     K K W P D+++ G +    H +Y   +         +   
Sbjct: 525 -YFLRYIDPHNSEELASPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 583

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P +++E  G D LR + +          + +
Sbjct: 584 EPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMFMGPLDASIAWSE 643

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            GL         +G    + R   +   +   +       T    ++       + ++ +
Sbjct: 644 TGL---------DGARRFLDRVWRLFTNEDGTISDKVTEQTGG--ALERSYHETVMKVTD 692

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    +  ++Q++  +++  +                       +  E       LL 
Sbjct: 693 HYEGLRFNTGISQLMVFINDAYK--------------------ADTLPKEYAEGFVKLLS 732

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQ 491
              P +A ++++ L     +  +++  Q
Sbjct: 733 PIAPHVAEELWNKLGHEG-SISYEAWPQ 759


>gi|42523714|ref|NP_969094.1| isoleucyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|81617068|sp|Q6MKX0|SYI_BDEBA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39575921|emb|CAE80087.1| isoleucyl-tRNA synthetase (IleRS) [Bdellovibrio bacteriovorus
           HD100]
          Length = 1056

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 4/257 (1%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++  W ++ +      GY +       K +PAD    G D     F+ +      L  
Sbjct: 524 DGVLDCWFESGSMPYAQWGYPETSVEDFKKAFPADFIAEGLDQTRGWFYTLSIIGTALFN 583

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
             P    V +   +   G K+SKSL N  DP+EV+ + G DALR +L+       ++  +
Sbjct: 584 QAPFKNVVVNGLVLAEDGRKMSKSLKNYPDPMEVLNQHGADALRLYLIDSPVVKAQELKF 643

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
            + G+   V   L     +    +    +  +        +    D+ +LS  + ++   
Sbjct: 644 SEKGVYDIVRKILLRWWNSYSFFANYANIDGFVPKGDAKKSPNILDQWVLSRLNGLIANT 703

Query: 402 RENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            + M    ++  +  ++  +    + Y    +    +   P+          EV+  L+ 
Sbjct: 704 HKEMDAYRLYNVVPHLLQFIEDLTNTYIRFNRSLFWQDGMPETKRYAYETLHEVLVTLSR 763

Query: 461 LLQAFVPKLANKIFDIL 477
           L+  F P ++   +  L
Sbjct: 764 LMAPFAPFMSEVTYKNL 780



 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 23/141 (16%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++         +    PH GH    ++ DV+ R+  + G  V    G D HG  +   
Sbjct: 44  EGKKTYSFYDGPPFATGLPHYGHLLAGVLKDVVPRYWTMKGYTVPRRFGWDCHGLPVEYE 103

Query: 62  AQNAGVTT---------------------KVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                        K +  +     R +   +D+    F  T + 
Sbjct: 104 INKTHKIESRKDVFKMGVANYNDACRSIVKRYSTEWKTTVRRVGRWVDMENPYF--TMDV 161

Query: 101 RHHDTCRILWKKISDKGDIYK 121
               +   +++++ +KG IY+
Sbjct: 162 SFMQSVWWVFQQLFNKGLIYE 182


>gi|15233478|ref|NP_192344.1| EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA
           ligase/ leucine-tRNA ligase/ nucleotide binding
           [Arabidopsis thaliana]
 gi|4982478|gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana]
 gi|7267192|emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana]
 gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana]
 gi|25090241|gb|AAN72260.1| At4g04350/T19B17_7 [Arabidopsis thaliana]
          Length = 973

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 112 TSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQ 171

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K    +N   FR     L  SY  D  + TTE  ++   + ++ ++  KG 
Sbjct: 172 YAIETGTHPKTTTLKNIDRFRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGL 231

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 232 AYQAEVPVNWCPALGTVLANEEVVDG----VSERGGHPVIRKPMRQWMLKITAYADRLLE 287

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 288 DLDELEWPESIKEMQRNWIGRSE 310



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 77/184 (41%), Gaps = 33/184 (17%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P +V+ E G D+LR + +          ++  G++         G+   
Sbjct: 730 KMSKSRGNVVNPDDVVLEYGADSLRLYEMFMGPFRDSKTWNTSGIE---------GVHRF 780

Query: 362 VSRSVSMILK--DYDGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
           ++R+  +++     DG        T+ + ++  L    + + ++ E +++   +  ++ +
Sbjct: 781 LARTWRLVIGLPQSDGSFKDGTLVTDDEPTLEQLRTLHKCIAKVTEEIESTRFNTGISGM 840

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+   ++    +P                    +I    +LL  + P +A +++  L
Sbjct: 841 MEFVNAAYKW--NNQPR------------------GIIEPFVLLLSPYAPHMAEELWSRL 880

Query: 478 FVAD 481
              +
Sbjct: 881 GHPN 884


>gi|153956343|ref|YP_001397108.1| isoleucyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|189082320|sp|A5N3P1|SYI_CLOK5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146349201|gb|EDK35737.1| IleS [Clostridium kluyveri DSM 555]
          Length = 1034

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/468 (16%), Positives = 147/468 (31%), Gaps = 28/468 (5%)

Query: 50  GTDEHGQKIAKAAQNAGVTTKV--FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                     +      VT     FV              DI Y     T        C 
Sbjct: 332 NIPMINSVTTQGKFKDEVTPWKGLFVKDADPKIIAYLKEKDILYKAEKFTHSYPFCWRCD 391

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                        +        +RD+   N ++     D          V+ + +  +  
Sbjct: 392 TTLLYYPRDTWFIRMSA-----MRDKLIRNTNDTNWYPDNIRTGRFGKFVEGVID--WGL 444

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY- 226
               Y    L  +E        I    E+     +   D+ L +   D G+K+  D  + 
Sbjct: 445 SRERYWGTPLPIWECECGHRECIGSIKELREKGINVPDDIELHKPYID-GVKLKCDKCHK 503

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                  ++  W D+ +       Y         K +PA       D     F+ +   +
Sbjct: 504 EMERVPEVIDCWFDSGSMPFAQHHYPFENRELFEKNFPAQFISEAVDQTRGWFYTLMAIS 563

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +L         +     +   G K+SK  GNV+ P  V+E  G DA R++   E A   
Sbjct: 564 TVLFDKSSFENCLVLGHVLDKHGLKMSKHKGNVLSPEVVLENEGADATRWYFYTESAPWL 623

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAFTESDESILSV 393
              + ++ ++          + N+ S  V  +  D D   P       +    D+ ++S 
Sbjct: 624 PSRFYEEAVQDSQ-RKFLGTLWNVYSFYV--LYADLDKFNPLEYSHFVSENVMDKWVISR 680

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTV 452
            + +++    N+ N  I +A   + + V E+ + Y    +     +   +          
Sbjct: 681 LNSLIKITEGNLDNYRITQAAESIGNFVDELSNWYVRRNRTRFWNEELAEDKVGAYVTLY 740

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            V+ +L ++   FVP +  +I+  L ++      +S+     P + L+
Sbjct: 741 NVLNKLCLIAAPFVPFMTEEIYQNLVLSLNKNVPESIHLCKWPEYDLN 788



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +PHIGH    +I D++ R+  + G  VL   G D HG  +   
Sbjct: 36  KDGEYFTFYDGPPTANGKPHIGHVLTRVIKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            + +                     K  V      +R M+D +      DD   T +  +
Sbjct: 96  VEKSLGISGKPQIEKYGVEDFIKKCKDSVFTYVSQWRKMSDRIGFWVDMDDPYVTYDNHY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DK  +YKG     Y  R     +  EV +G       + +   +   E
Sbjct: 156 IESEWWALKQIWDKNLLYKGHKIVPYCPRCGTALSSHEVSQGYKDVKETSVYVKFKIKNE 215

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 216 DKYILAWT 223


>gi|268316238|ref|YP_003289957.1| leucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333772|gb|ACY47569.1| leucyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 906

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH       D++AR+ R+ G +VL   G D  G    + 
Sbjct: 36  NKPKYYVLDMFPYPSGAGLHVGHPEGYTATDIMARYRRMKGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       ++  ++N   FR     L  SY  D  I TT+ R++   + ++ ++   G  
Sbjct: 96  AIETNTHPRITTERNITRFRSQLKSLGFSYDWDREINTTDPRYYKWTQWIFLQLYKMGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G           PV       +  R++AY D+LL  
Sbjct: 156 YEAEVPVNWCPALGTVLANEEVIDGKS----ERGGYPVYRRPMRQWMLRITAYADRLLED 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 212 LELLDWPESIKEMQRNWIGRSE 233



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 32/190 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV++P +VIE+ G D+LR + +      +   +   G++         G+   
Sbjct: 678 KMSKSRGNVVNPDDVIEQYGADSLRLYEMFMGPLEQVKPWSMRGVE---------GVHRF 728

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   + + D DG +    A  E     L V  R L+ + ++++    + A+A ++  V
Sbjct: 729 LNRVWRLYVNDADGSLRVTDA--EPTREQLRVLHRTLRRVTDDIEAMRFNTAIAAMMEFV 786

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +E +R+     P                    V     ++L  F P +A ++++ L    
Sbjct: 787 NEANRW--DTFPRA------------------VAEPFVLMLSPFAPHIAEELWERLGHT- 825

Query: 482 ENRCFQSLDQ 491
           E+  ++   +
Sbjct: 826 ESLAYEPWPE 835


>gi|269865220|ref|XP_002651848.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063768|gb|EED42209.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 286

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 26/258 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++  +       +  
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIF--LKTIDHFDEKE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWMEEEGYF--FRLSAYQDKLLS 178
            +  +  + + +  D  +          + +      ++ E+      FR S  +     
Sbjct: 128 INQMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQELTNFRCSICKTTPQI 187

Query: 179 YYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRK-TFDWGIKIPD 222
                  F L   +                    +++K  L    ++RK    WG+ +P 
Sbjct: 188 KTTKQLFFNLNELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPL 247

Query: 223 DP--QYIMYVWIDALTNY 238
                 + YVW DA   Y
Sbjct: 248 KEYDDKVFYVWYDAPIGY 265


>gi|219856658|ref|YP_002473780.1| hypothetical protein CKR_3315 [Clostridium kluyveri NBRC 12016]
 gi|219570382|dbj|BAH08366.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 1042

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/468 (16%), Positives = 147/468 (31%), Gaps = 28/468 (5%)

Query: 50  GTDEHGQKIAKAAQNAGVTTKV--FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                     +      VT     FV              DI Y     T        C 
Sbjct: 340 NIPMINSVTTQGKFKDEVTPWKGLFVKDADPKIIAYLKEKDILYKAEKFTHSYPFCWRCD 399

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                        +        +RD+   N ++     D          V+ + +  +  
Sbjct: 400 TTLLYYPRDTWFIRMSA-----MRDKLIRNTNDTNWYPDNIRTGRFGKFVEGVID--WGL 452

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY- 226
               Y    L  +E        I    E+     +   D+ L +   D G+K+  D  + 
Sbjct: 453 SRERYWGTPLPIWECECGHRECIGSIKELREKGINVPDDIELHKPYID-GVKLKCDKCHK 511

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                  ++  W D+ +       Y         K +PA       D     F+ +   +
Sbjct: 512 EMERVPEVIDCWFDSGSMPFAQHHYPFENRELFEKNFPAQFISEAVDQTRGWFYTLMAIS 571

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +L         +     +   G K+SK  GNV+ P  V+E  G DA R++   E A   
Sbjct: 572 TVLFDKSSFENCLVLGHVLDKHGLKMSKHKGNVLSPEVVLENEGADATRWYFYTESAPWL 631

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAFTESDESILSV 393
              + ++ ++          + N+ S  V  +  D D   P       +    D+ ++S 
Sbjct: 632 PSRFYEEAVQDSQ-RKFLGTLWNVYSFYV--LYADLDKFNPLEYSHFVSENVMDKWVISR 688

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTV 452
            + +++    N+ N  I +A   + + V E+ + Y    +     +   +          
Sbjct: 689 LNSLIKITEGNLDNYRITQAAESIGNFVDELSNWYVRRNRTRFWNEELAEDKVGAYVTLY 748

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
            V+ +L ++   FVP +  +I+  L ++      +S+     P + L+
Sbjct: 749 NVLNKLCLIAAPFVPFMTEEIYQNLVLSLNKNVPESIHLCKWPEYDLN 796



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E           N +PHIGH    +I D++ R+  + G  VL   G D HG  +   
Sbjct: 44  KDGEYFTFYDGPPTANGKPHIGHVLTRVIKDLIPRYKVMKGYKVLRKAGWDTHGLPVELE 103

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            + +                     K  V      +R M+D +      DD   T +  +
Sbjct: 104 VEKSLGISGKPQIEKYGVEDFIKKCKDSVFTYVSQWRKMSDRIGFWVDMDDPYVTYDNHY 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++     K+I DK  +YKG     Y  R     +  EV +G       + +   +   E
Sbjct: 164 IESEWWALKQIWDKNLLYKGHKIVPYCPRCGTALSSHEVSQGYKDVKETSVYVKFKIKNE 223

Query: 163 EGYFFRLS 170
           + Y    +
Sbjct: 224 DKYILAWT 231


>gi|313901175|ref|ZP_07834663.1| leucine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954133|gb|EFR35813.1| leucine--tRNA ligase [Clostridium sp. HGF2]
          Length = 799

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 86/253 (33%), Gaps = 16/253 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++ R  R+ G +VL   G D  G    + 
Sbjct: 30  DKPKCYVLDMFPYPSGNGLHVGHPEGYTATDIVCRMKRMQGHNVLHPMGWDAFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F   N  +FR+    L  SY  D  I TT+  ++   + ++ K+ DKG  
Sbjct: 90  AITTGNHPAEFTKMNIDHFREQIRALGFSYDWDREISTTDPSYYKWTQWIFLKLYDKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G   +       PV       +  +++ Y ++LL  
Sbjct: 150 YVDEIPVNWCPELGTVLANEEVIDGKSERGGF----PVIRKPMRQWVLKITEYAERLLED 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E         E +   I   K              + IK       +     D L    
Sbjct: 206 LELCDWPTSTKEMQINWIGKSKG---------ANVVFKIKDTKKEFTVFTTRCDTLFGAT 256

Query: 240 TTTGYLDNPDGSK 252
                 ++P   +
Sbjct: 257 YCVMAPEHPYVDE 269



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 112/382 (29%), Gaps = 57/382 (14%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +               Y   D ++              ++              +     
Sbjct: 395 MIAWLEEHACGCAKTTYKLRDWLFSRQRYWGEPIPIIHMEDGTTRTVDIDELPLELPETK 454

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            ++       P+    + ++    G+K    +     W                     Y
Sbjct: 455 NFKPSGSGESPLAHCEDWLNVEIDGVKGKRETNTMPQWA------------GSCWYYLRY 502

Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKK 289
           +              K W P DL+V G +    H +Y   +         +    P  + 
Sbjct: 503 IDPKNDDAIAAEELLKHWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVPTKEPFQRL 562

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                 +    EK+SKS GNV++P +++E  G DALR + +          +   GL   
Sbjct: 563 FHQGMILGENNEKMSKSRGNVVNPDDIVESHGADALRVYEMFMGPLEAALPWSTTGL--- 619

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 +G    + R    +  DYD           +D  +  V    ++++  +++   
Sbjct: 620 ------DGARRWLDRVWR-LYTDYDKFT------EANDGKLDKVYHATVKKVTNDVETLN 666

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           ++ A++Q++  ++E  +                       + VE  +  A +   F P +
Sbjct: 667 LNTAISQMMIFINECYK--------------------AESIYVEYAKGFAKMFACFAPHM 706

Query: 470 ANKIFDILFVADENRCFQSLDQ 491
             +I+  +F       ++    
Sbjct: 707 GEEIWSTVFGGCGTITYEPWPT 728


>gi|308466702|ref|XP_003095603.1| CRE-LARS-2 protein [Caenorhabditis remanei]
 gi|308245127|gb|EFO89079.1| CRE-LARS-2 protein [Caenorhabditis remanei]
          Length = 874

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 5/188 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  K YI +   YP+ + HIGH     I+D  AR++RL+G +V+   G D  G     A
Sbjct: 72  SKNSKKYILSMFPYPSGRLHIGHMRVYTISDTTARYYRLNGYEVIHPIGWDSFGLPAENA 131

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A++ GV  + +  +N    ++      I +D    I T E       + ++ K+ + G +
Sbjct: 132 ARDKGVDPREWTVKNIETMKEQLVKTKILFDWEREISTCEPEFFRWTQWIFCKLFEHGLV 191

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +      +   D+     +++          A     +  +   +      Y  +L   
Sbjct: 192 KRTTAEVNWDPVDQTVLAAEQIDNEGRSWRSGAMA---EKKKLRQWMIETPKYAKRLQEG 248

Query: 180 YESHPEFI 187
             +  E  
Sbjct: 249 LRAMSEQW 256



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 23/191 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +D   +++  GVD  R  L+   A      + +  LK         GI  
Sbjct: 585 EKMSKSKNNGVDLAAMLDSEGVDMTRLRLLEAAAPRAPINWGETDLK---------GIKK 635

Query: 361 LVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           L+ R  ++     +    +       + +ESI    +  ++ +   ++   +H     ++
Sbjct: 636 LLDRIATINSDVIESRGSSKIVDLDPKIEESIRETYNFFVRNVGMCLEILHLHN--TALM 693

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L    +          LKK +P   +         ++ L I+LQ F P +A +++  L+
Sbjct: 694 RLQGFTN---------ALKKIDPIYLANSPE-GQRAVKSLVIMLQVFCPHVAAEMWSALY 743

Query: 479 VADENRCFQSL 489
            ++     Q  
Sbjct: 744 PSESIISAQPW 754


>gi|29840370|ref|NP_829476.1| leucyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301688|sp|Q822R7|SYL_CHLCV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29834719|gb|AAP05354.1| leucyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 820

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 83/225 (36%), Gaps = 7/225 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  SDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGYAVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +    +N  NFR     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPDYYRWTQKLFLFLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++EV  G           PV+      +  R++AY D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEVENG----LSVEGGYPVERRMLRQWILRITAYSDQLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             E         + +   I   +  L    ++ + F        D
Sbjct: 204 GLEDLDWPENVKQLQRNWIGKSEGALVRFEVNNERFLEVFTTRPD 248



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 102/316 (32%), Gaps = 89/316 (28%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
             + M  W  +   YL      +          ++W P DL++ G +    H +Y   + 
Sbjct: 479 ETHTMPQWAGSCWYYLRFCDAHNSQAPWSNENERYWMPVDLYIGGAEHAVLHLLYSRFWH 538

Query: 280 -------LSANLPLPKKVFSHGFIL---------------------------------HK 299
                  + +     KK+ + G +L                                  +
Sbjct: 539 RVFYEAGMVSTAEPFKKLINQGLVLATSYRIPGKGYVYPEDAREDNGVWMSASGEELEVR 598

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DALR + +      K+  +   G+          G  
Sbjct: 599 QEKMSKSKLNGVDPQILIDEFGADALRMYAMFSGPLDKNKLWSNQGVS---------GCR 649

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M          +       D   +++  R++  + E+++   ++   +  + 
Sbjct: 650 RFLNRFYEMAT--------SASVQDVDDPKGMALAHRLVHRVGEDIEKMSLNTIPSSFME 701

Query: 420 LVSE---VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++E   +D Y     P                     +  +   L    P ++ +++ +
Sbjct: 702 FINEFVKLDIY-----PRS------------------ALAMVVQALAPIAPHISEELWTV 738

Query: 477 LFVAD--ENRCFQSLD 490
           L  A   +   +  +D
Sbjct: 739 LGYAPGIDAAGWPKVD 754


>gi|282856536|ref|ZP_06265811.1| leucine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585657|gb|EFB90950.1| leucine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 836

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 8/206 (3%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + + ++ Y+     YP+    H+GH       D+  R+ R++G +VL   G D  G    
Sbjct: 30  VPDDKRRYVLDMFPYPSGAGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGFDSFGLPAE 89

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
             A   G   KV  ++N   FR     L  SY  D  + T +  ++   + L+ +I  KG
Sbjct: 90  NYAIKTGTHPKVTTEKNIDIFRAQIKSLGFSYDWDREVSTCDPEYYKWTQWLFLQIFKKG 149

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      +    +    ++EV +G          + V       +  +++ Y ++LL
Sbjct: 150 LAYEAQIPINWCPSCQTGLANEEVKEGH----CERCGHQVHRRNLRQWVLKITDYAERLL 205

Query: 178 SYYESHPEFILPIERRNEVISFVKSG 203
           +      ++  PI+           G
Sbjct: 206 NDV-DKLDWPEPIKIMQRNWIGKSVG 230



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 62/470 (13%), Positives = 139/470 (29%), Gaps = 101/470 (21%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN--- 155
            +        + + +    D+ +  Y G     +  + +   + +  D      + +   
Sbjct: 349 WEFAKKFGLPIVEVLKGDVDVQEEVYEGDGPHVNSGFLDGLGMQEAIDAVIAWLEEHGKG 408

Query: 156 -PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKD 206
                 +   + F    Y  + +          +P+            +      +G   
Sbjct: 409 KKAVNYKLRDWIFSRQRYWGEPMPLIHCPHCGTVPVPEEQLPLLLPEVKKYEPTGTGESP 468

Query: 207 LSLSRKTFDWGIKIPDDP----QYIMYVWIDALTNY----LTTTGYLDNPDGSKAKFWPA 258
           L+   +  +    +   P       M  W  +   Y                +   + P 
Sbjct: 469 LANVEEWVNTPCPVCGAPARRETNTMPQWAGSCWYYLRFLDPHNDKEFAARDTIDYWMPV 528

Query: 259 DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKV-------------------- 290
           DL+V G +    H +Y   +         ++ + P  + V                    
Sbjct: 529 DLYVGGAEHAVLHLLYARFWHKVFYDLGLVNTDEPFARLVNQGMITSFAYQRPDKSLVAV 588

Query: 291 -----FSHGFILHKG---------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                 +    + KG          K+SKSL NVI+P E+++  G D+LR + +      
Sbjct: 589 DQVEELAPDMFVEKGTGVKLERVVAKMSKSLKNVINPDEIVKNYGADSLRLYEMFMGPLQ 648

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
               +   GL+              V R +  + K    +   P +       +     R
Sbjct: 649 MSKPWSTQGLQG-------------VYRFLEKVWK----LGEKPLSDEPVPAELEKTLHR 691

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++++ ++      + A++Q++ LV+E  +                  + V Y    ++ 
Sbjct: 692 TIKKVSDDTATLNFNTAISQMMVLVNEAGK------------------ADVCYRG--MMD 731

Query: 457 QLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLKPGFMLHKTFD 504
             A LL  + P LA +++  +  A       +   D+RL     +     
Sbjct: 732 VFARLLSPYAPHLAEELWAKIGNAPCVSLAKWPEYDERLTVSETVTVPVQ 781


>gi|323704166|ref|ZP_08115745.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536232|gb|EGB26004.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 927

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 18/290 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G         IM VW D+ ++++           ++   WPADL++ G D     F
Sbjct: 515 RCECGSTEFRKETDIMDVWFDSGSSHVAVLE------TTEGLRWPADLYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN IDP +V++E G D LR + V
Sbjct: 569 QSSLLTSVATKGIAPYKNVLTHGFVVDGEGRKMSKSLGNGIDPADVVKEYGADILRLWAV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    K+ LK+   +     I N     +S +   D D  +       + D+ 
Sbjct: 629 SAD-FTSDMRISKEILKQMTES--YRKIRNTAKFLLSNLYDFDADKDLLPYDELLDIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKP--WELKKTNPDRAS 445
            L   + +++++ E       +  L  V    +V   + Y D  K   +    T+ +R  
Sbjct: 686 ALYKYNELVKDVTEAFDKYKFYEFLHLVHTFCIVDMSNLYLDILKDRLYTFPATSKER-K 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                   ++     ++   +   A++I+  +    +N  F+S+     P
Sbjct: 745 AAQTTLYIILNGFVRIIAPVLTFTADEIWSYMQHDAKN-SFESVQLADWP 793



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   H+G A   ++ D++ ++  + G +  +  G D HG  I + 
Sbjct: 45  KGKEKFILHDGPPYANGNIHLGTAMNKVLKDMVVKYKTMRGYESPYVPGWDTHGLPIEQQ 104

Query: 62  -------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + F        ++    L +   + +   T +  +    
Sbjct: 105 AIKTLGIKRNDVGPVEFRRVCRDFAFSQIEKQKEQFIRLGVRGDWQNPYLTLKPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ KG IYKG    ++    E    + E+  
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCTDCETALAEAEIEY 201


>gi|312875953|ref|ZP_07735942.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797151|gb|EFR13491.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 920

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 111/296 (37%), Gaps = 23/296 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
            +    IM VW D+ +++             +   WP D+++ G D     F +    A 
Sbjct: 524 FEKETDIMDVWFDSGSSHAYVLE------SREDLEWPCDMYLEGNDQYRGWFQSSLLTAV 577

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKS GNVI P ++I E G D LR + V       D
Sbjct: 578 ATKGRAPYKIVLTHGFVVDGEGKKMSKSEGNVISPFDIINEFGADILRLWCVSADYTT-D 636

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSR 396
               K+ +K+    ++   I N   R +   L D++      G     E D   L     
Sbjct: 637 MRISKEIIKQL--TEIYRKIRNTA-RFLLGNLYDFNPKTDKVGYEDLKEIDRWALQRLYM 693

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRASTVLYVTVE 453
           +++++ +  +    ++    V +   +   + Y D  K      K+      +   V  E
Sbjct: 694 LIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASKSESLDRRSAQTVMYE 753

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN------RCFQSLDQRLKPGFMLHKTF 503
           ++  L  L+   +   A +++  +   +E+        +  +++ +     L + +
Sbjct: 754 ILVALTKLIAPILSFTAEEVWQNIAFKEEDAESVFLTSWPKVNEGILKDETLREKW 809



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   ++ D++ ++  L G    +  G D HG  I + 
Sbjct: 45  KNNKKFILHDGPPYANGDIHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R+    L +   +++   T + +     
Sbjct: 105 VIKKFGVNRHEVDPVEFRKKCKEFALNYIDIQREQFKRLGVFGEWENPYMTLDPKFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++ +++ KG IYKG    ++    E    + E+    D  Y
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYQEDRTY 207


>gi|330428611|gb|AEC19945.1| valyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 950

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 111/363 (30%), Gaps = 50/363 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V++  E          +            +   I         +     +    ++    
Sbjct: 411 VKFYPENWTTTYNQWLEKIQDWCISRQLWWGHQIPAWYSDDGQIFVARNEADALQQAKAA 470

Query: 217 GI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
           G+   +  DP  ++  W  +     T  G+ +       ++ P+ + V G DI+ F    
Sbjct: 471 GVSGPLTRDPD-VLDTWFSSALVPFTDLGWPEQTP-DLDRYLPSSVLVTGFDIIFFWVAR 528

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------------- 316
           +   +  ++  +P              G+K+SKS GN IDP+++                
Sbjct: 529 MVMMSMHMTGKVPFETVYVHGLVCDMDGKKMSKSKGNTIDPVDLIDGIALDDLLEKRSTG 588

Query: 317 ---------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                                    G DALR+ +      G++  +D    +     +  
Sbjct: 589 LMNPKQAASIRKKTSKDYPNGFPAYGTDALRFTMAAYATLGRNINFDLKRCEG--YRNFC 646

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPG-AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N + N  SR V M  + +           + +D+ I+S   R+  +I     +       
Sbjct: 647 NKLWN-ASRFVLMNTEGHALGDNRITPELSFADQWIISQLQRLEADIERGFADYRFDNIA 705

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   +     D Y +  K      T   +  T  +  +  +  L  L    +P +  +
Sbjct: 706 NALYHFIWNEYCDWYVELAKVQIQHGTPAAQLGT-RHTLIRALETLLRLAHPIIPFITEE 764

Query: 473 IFD 475
           ++ 
Sbjct: 765 LWQ 767



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA+   + D L R+HR+ G D +F  GTD  G       + 
Sbjct: 51  KPFVIQFPPPNVTGTLHMGHAFNQTVMDGLVRYHRMRGDDTVFIPGTDHAGIATQIVVER 110

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
                                  +  ++     +    L  S  +D    T +       
Sbjct: 111 QLDAQNVSRHDLGREKFVDKVWEWKQKSGNAITEQFRRLGSSCDWDREYFTMDDNLSRGV 170

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              + ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 171 VETFVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGFMWEIRYPL 221


>gi|327399319|ref|YP_004340188.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181948|gb|AEA34129.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 814

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 6/177 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y      YP+ + H+GH     I D +AR+    G +VL   G D  G     AA
Sbjct: 30  KKPKFYQLEMFPYPSGRIHMGHVRNYSIGDAIARYKFAQGYNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            N       +   N          L  SY  D  + T ++ ++   + ++ ++  KG +Y
Sbjct: 90  INNKTHPAKWTYSNIDYMIKELKRLGFSYDWDRLVITCDENYYKWEQKIFIEMLKKGMVY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           +   +  Y    +    +++V  G          + V   E + +F +++ Y D+LL
Sbjct: 150 RAKSTVNYCPTCKTVLANEQVEDGK----CWRCGDEVIQKEMDEWFLKITDYADQLL 202



 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 111/274 (40%), Gaps = 31/274 (11%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-------LSANL 284
                Y +        D  +A +W   D +V G +    H +Y   F         + + 
Sbjct: 500 WYFLRYCSPKYDKAIFDKQRADYWMDVDQYVGGIEHAVMHLLYARYFTKVLRDLGYANST 559

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
              K++ + G ++  G K+SKS GNV+DP ++I + G D  R F++      KD  +  +
Sbjct: 560 EPFKRLLTQGMVIKDGAKMSKSKGNVVDPDDIINQYGADTARLFILFAAPPEKDLEWSDE 619

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           G++         G    ++R   ++ +  D  +      T+  + +  +    +++I ++
Sbjct: 620 GVE---------GAYRFLNRVWRLVYEYKDLKVIDIDINTDRLKELNYMIHSTIKKITQD 670

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
            +N   + A+A  +  V+    +    KP    KT  + A     +  + I  L I+L  
Sbjct: 671 FENYHFNTAIAASMEFVN----FLYDFKP----KTEDENA-----LFAKAIEVLLIMLNP 717

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
            VP +A +++  L   +    F+   +  +   +
Sbjct: 718 IVPHIAEELW-QLTGHETLIAFEPWPEYDESATV 750


>gi|313246377|emb|CBY35290.1| unnamed protein product [Oikopleura dioica]
          Length = 1205

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y  +   +    +PA     G D     F+ +   +  L    
Sbjct: 524 VFDCWFESGSMPYAQKHYPFDNKKAFEDTFPAHFIAEGIDQTRGWFYTLIVLSTHLFGKA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDK 343
           P    + +   +   G K+SKS  N  DP  + ++ G DA+R +L+  +A  G D  + +
Sbjct: 584 PFKNVIVNGLVLAEDGNKMSKSKRNFPDPKLLFDKYGADAIRLYLISSVAVAGGDLRFKE 643

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSR 396
             +K+ +        N    LV   +   +         P     +    D+ ILS    
Sbjct: 644 QEVKEMIRDVFLPWYNAYRFLVQNILRHQIDTNSTFTYDPALIGTSDNIMDKWILSYSQS 703

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ ++E M+   ++R + +++  V ++ + Y    +     +T  +     L     VI
Sbjct: 704 LIKSVKEEMETYHLNRVVPKLLKFVDQLTNWYVRLNRRRLKGETGAEDCVHALTTLYTVI 763

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  L+    P L   ++  L
Sbjct: 764 DWMNRLMAPATPFLTEHLYQNL 785



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +          +   +PH GH     I D + R+   +G  V    G D HG  +   
Sbjct: 38  KGKPPYVFYDGPPFATGKPHYGHLLAGTIKDTVTRYWHQNGYHVERRFGWDTHGLPVEHE 97

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                  T                 +  V + S  ++D  D +   I +++  +T     
Sbjct: 98  IDKTHGITGPEDVAKMGIDKYNALCRSIVMRYSGEWKDTVDRIGRWIDFENDYKTLYPWF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++  KG +Y G     +S       ++ E  +   
Sbjct: 158 MESVWWVFKQLFSKGLVYHGQKVMPFSTACNTPLSNFEAGQDYK 201


>gi|261416197|ref|YP_003249880.1| isoleucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372653|gb|ACX75398.1| isoleucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326943|gb|ADL26144.1| isoleucine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 1061

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 77/440 (17%), Positives = 148/440 (33%), Gaps = 16/440 (3%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRHHDTC 106
           D  G+   K     G+  K    +  R F++   V        SY    RT     +   
Sbjct: 351 DTEGKFTDKVPMWKGLGAKEADKEIIRFFKEQGRVFKQDTIVHSYPHCWRTGVPLIYRAL 410

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           +  + KI        G          E     + V        +       +        
Sbjct: 411 KTWFLKIDAPVTSKDGVTKTLKEWMVENNQTVNWVPDHIKNGRFGKWLEGARDWNLSRNR 470

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F  +     +    +     +  IE   ++       L    + + T +   K+      
Sbjct: 471 FWGTP--IPVWLSDDGDMIAVGSIEELQQLTGVKLDDLHKHFVDKLTIEKNGKVYRRTPE 528

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         + +PAD    G D     F+ +   +  L    
Sbjct: 529 VFDCWFESGSMPYASRHYPFENKELVERSFPADFIAEGLDQTRGWFYTLTVLSNALFQKP 588

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
                + +   +   G K+SKS  N  DP ++IE  G DA+R F++   A   +D  + +
Sbjct: 589 AFKNVIVNGIILAEDGSKMSKSKRNYPDPNDLIERTGADAIRLFMINSAALKAEDLRFSE 648

Query: 344 DG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVL 398
           +G   + K+V   L N +   VS   +   K      P     +  E D  +L+    + 
Sbjct: 649 EGVKGIVKQVMLPLWNAVAFFVSNHNADAAKGQLTWKPGQEVKSDNELDRWMLATLQDLA 708

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            ++   M+   ++  +  VI+ V ++ + Y    +    K  N    +       +V+  
Sbjct: 709 AKVEVEMKAYRLYNVVPAVIAAVDDLTNWYVRRSRRRFWKSENDGDKNAAYATMYKVLVD 768

Query: 458 LAILLQAFVPKLANKIFDIL 477
            + +L  F+P LA +I+ IL
Sbjct: 769 FSKILAPFLPLLAEEIYQIL 788



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 69/457 (15%), Positives = 140/457 (30%), Gaps = 52/457 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E E         +    PH GH     I D++ R+  + G  V    G D HG  I    
Sbjct: 37  ETEPYTFYDGPPFATGLPHYGHLLAGTIKDIVPRYWTMKGKKVPRGFGWDCHGLPIESLV 96

Query: 63  QNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           QN                            +  +  +  R M   +D  +D   +T +K 
Sbjct: 97  QNELGLAGVAEIQKLGVDKFNETCRGKVLKYTSEWKKTVRRMGRWVD--FDKGYKTMDKN 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             ++   ++K+  DKG IY+G     YS       ++ E  +G   +   +         
Sbjct: 155 FMESVWWVFKQCFDKGLIYQGYRIQPYSPALATPLSNFETNQGYKDRQDPSLTLIFPLNT 214

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           +E  F   S        +       I+     +  +         ++ SR    +     
Sbjct: 215 DEAKFKDTSILVWTTTPWTLYSNFCIVVGPDMDYNLVEQDGKKYWIAASRTAAYF----- 269

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            +P  +       L        Y      S A         +  D L  H   +PA  +S
Sbjct: 270 KNPNIVDTCKGSELVG----KDYEPLSRISDA--------FVTPDQLSRHYKIYPADYVS 317

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG--VDALRYFLVREIACGKDG 339
                     +  F     +K ++    + DP++   +    V   +    +E       
Sbjct: 318 TEDGTGAVHTAPSFGEEDFQKGAELDLGLFDPLDTEGKFTDKVPMWKGLGAKEADKEIIR 377

Query: 340 FYDKDG--LKKRVNADLANGIGN----LVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           F+ + G   K+                L+ R++       D  + +    T++ +  +  
Sbjct: 378 FFKEQGRVFKQDTIVHSYPHCWRTGVPLIYRALKTWFLKIDAPVTSKDGVTKTLKEWMVE 437

Query: 394 CSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYF 428
            ++ +  + ++++N    + L      +L    +R++
Sbjct: 438 NNQTVNWVPDHIKNGRFGKWLEGARDWNLSR--NRFW 472


>gi|160934412|ref|ZP_02081799.1| hypothetical protein CLOLEP_03285 [Clostridium leptum DSM 753]
 gi|156867085|gb|EDO60457.1| hypothetical protein CLOLEP_03285 [Clostridium leptum DSM 753]
          Length = 795

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y      YP+ Q  H+GH       D++AR  RL G +VL+  G D  G     
Sbjct: 21  SDKPKYYTLIEFPYPSGQGLHVGHPRSYTALDIVARKRRLMGYNVLYPIGWDAFGLPTEN 80

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    V  +V   +N   F+     L IS+D    I TT+  ++   + ++ ++   G 
Sbjct: 81  FAIKNHVHPEVVTKKNIARFKQQLQSLGISFDWSREINTTDPSYYKWTQWIFLQLFKHGL 140

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   S  +    +    ++EV  G          + V    +  +  +++ Y  +L+ 
Sbjct: 141 AYKKEASVNWCTSCKCVLANEEVVNG----VCERCGSEVVRKVKSQWMLKITEYAQRLID 196

Query: 179 YY 180
             
Sbjct: 197 DL 198



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 131/386 (33%), Gaps = 66/386 (17%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            I K             +   D V+       Y  +  P+ + E+ GY     +      
Sbjct: 389 KITKWLTENHRGRAKVNFKLRDWVFSRQ---RYWGEPIPIVYCEKCGYVPLPES------ 439

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDL--SLSRKTFDWGIKIPDDPQYIMYVWI--- 232
                     LP     E     +S L ++   ++      G     +    M  W    
Sbjct: 440 -----ELPLTLPEVDSYEPTENGESPLANMTDWVNTTCPHCGGPAKRETD-TMPQWAGSS 493

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN-------- 283
                Y               ++W P D +  G +    H +Y   +             
Sbjct: 494 WYFLRYTDPCNDQALASQQALEYWTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIKVVPTP 553

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K+      +   GEK+SKS GNV++P ++++E G D +R F +      K   +  
Sbjct: 554 EPYAKRTSHGMILGENGEKMSKSRGNVVNPDDIVKEYGADTMRLFEMFIGDFEKAAPWSA 613

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+  R          NL      +++KD                S+ +   + ++++ E
Sbjct: 614 AGI--RGCRRFVERYWNLQD----ILVKDGGIR-----------ASLETPFHKTIKKVGE 656

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A+A ++SL++++   +D+                   +T E ++   ILL 
Sbjct: 657 DIENLKFNTAIAALMSLINDI---YDS-----------------GSITPEELKVFTILLN 696

Query: 464 AFVPKLANKIFDILFVADENRCFQSL 489
            F P +  +++ +  + +E  C Q  
Sbjct: 697 PFAPHVTEEVWSLNMLGEEMVCQQQW 722


>gi|70726164|ref|YP_253078.1| leucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762321|sp|Q4L7A3|SYL_STAHJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68446888|dbj|BAE04472.1| leucyl-rRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 804

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKQNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWPESIKDMQRNWIGRSE 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 110/282 (39%), Gaps = 46/282 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNSNMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNV++P ++++  G D LR + +   
Sbjct: 549 YDLGVVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVDSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + +   +    +      +D  +  V
Sbjct: 608 PLDAAIAWSENGL---------DGSRRFLDRVWRLFIN--EDGSLSNKIVENNDNGLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+      + A++Q++  +++  +                 A T+     E
Sbjct: 657 YNQTVKKVTEDFNTLNFNTAISQLMVFINDCYK-----------------AETIYQPYAE 699

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
                  +L    P +  +++D L   D    + + + D+ L
Sbjct: 700 GF---VKMLAPIAPHIGEELWDRLGNEDTITYQPWPTYDESL 738


>gi|311031241|ref|ZP_07709331.1| leucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 805

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 79/210 (37%), Gaps = 7/210 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +EK Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KGKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGQNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F +QN   FR     L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTEQNINTFRRQIKSLGFSYDWDREVNTTDPEYYKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+      +  R++ Y D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMRQWILRITEYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLS 208
                       + +   I   +      S
Sbjct: 204 DLNELDWPESLKDMQRNWIGRSEGANVHFS 233



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 95/264 (35%), Gaps = 41/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P D+++ G +    H +Y   +    
Sbjct: 491 PQWGGSCW--YYLRYIDPKNSEQLADPEKLKEWLPVDIYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P  ++E  G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQKLFNQGMILGVNNEKMSKSKGNVVNPDHIVESHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL         +G    + R   + +++   +       TE D ++    
Sbjct: 609 LEASIAWSTNGL---------DGSRRFLDRVWRLFVEENGKLSSKVAEVTEED-TLEKTY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              ++++ E+ +    + A++Q++  ++E  +                       +  + 
Sbjct: 659 HATVKKVTEDYEGLRFNTAISQMMVFINEAYK--------------------ADTIAKDY 698

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     +L    P +A ++++ L 
Sbjct: 699 VEGFVKMLSPVCPHIAEELWEKLG 722


>gi|254436724|ref|ZP_05050218.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252170|gb|EDY76484.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 770

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ K Y+     YP+ + HIGH     + DV+AR+    G +VL   G D  G     AA
Sbjct: 30  DKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLATGHNVLHPMGFDAFGMPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  K +  QN  +         L I +     T +  ++   + L+  + D G I 
Sbjct: 90  MQTGIHPKDYTYQNIDDMVAQMKPLGLGIDWSRMFATCDPEYYGQQQSLFIDMLDAGMID 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D     +++V  G            V+  +   +FF++S Y D+LL   
Sbjct: 150 RKNATVNWDPVDMTVLANEQVIDGKG----WRSGAEVERKDLTQWFFKISDYADELLGAL 205

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +    +   ++           GL+
Sbjct: 206 DGLDNWPAKVKLMQANWIGKSRGLQ 230



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 60/349 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY-----YESHPEFILPIERRNEVI 197
            G   Q Y     PV   +  G            L Y        +P    P  R     
Sbjct: 427 WGLSRQRYWGAPIPVVHCDACGVVPEKKENLPIELPYDVTFDIPGNPLDRHPTWRNTPCP 486

Query: 198 SFVKSGLKD-------LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
           S  K  L++       +  S     +       P            +             
Sbjct: 487 SCGKPALRETDTMDTFVDSSWYFARFTAPHALTPTQAEDAAYWMNVDQYIGGIEHAILHL 546

Query: 251 SKAKFWPADLHVIGK----DILRFHAIYWPAFLLSA-------------NLPLPKKVFSH 293
             ++F+   +H  G      I  F A++    +  A             + P    +   
Sbjct: 547 LYSRFFSRAMHKTGHLPASAIEPFDALFTQGMVTHAIFKTDTADGRPVYHYPEAVDLRDG 606

Query: 294 GFILHKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
           G  L  G         K+SKS  NV+DP+ +I++ G D  R+F++ +    +D  +   G
Sbjct: 607 GGFLKDGTQVDIIPSAKMSKSKNNVVDPVAIIDKYGADTARWFVLSDSPPERDVEWTASG 666

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            +            + V R    I+++ D       A  + DE+IL    + + E+ + +
Sbjct: 667 AEATF------KHLSRVHRIACEIVENTD-------AANDQDEAILRDMHKAIFEVTQGV 713

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++   + ++A++    + + +           K   D   T +     +
Sbjct: 714 ESFGFNASIAKLYGFTNAIAK----------SKAGGDAKRTAMKTLCTI 752


>gi|160933116|ref|ZP_02080505.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
 gi|156868190|gb|EDO61562.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
          Length = 931

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 130/399 (32%), Gaps = 41/399 (10%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K I      ++      +   ++ + + ++  + A     + Q  P  W E+     
Sbjct: 396 AMEKIIHQYPHCWRCKNQVLFRATEQWFCSVEDFKEDAVKAIQDVQWIP-AWGEDRITSM 454

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD---- 223
                +       +      +PI    E    +      L++SR   + G     +    
Sbjct: 455 VRD--RRDWCISRQRKWGVPIPIFFCKECGEPLIDKEAMLAVSRLFREKGSDAWYELNTE 512

Query: 224 -------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                               + IM VW D+ + +                 +PADL++ G
Sbjct: 513 DILPAGTKCKKCGASSFDKEKDIMDVWFDSGSTHAAVLSKRPY------LKFPADLYLEG 566

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F +    +       P    V     +  +G K+SKSLGN I+P E++++ G 
Sbjct: 567 ADQYRGWFQSSLLTSVATKGTAPYKAVVTHGWVVDGEGRKMSKSLGNGIEPQEIVDQYGA 626

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPG 381
           D LR ++        D    KD LK+   ++    I N     +  +   + D       
Sbjct: 627 DILRLWVASSDY-HADIRISKDILKQL--SEAYRKIRNTARYILGNLYDFNPDTDRVPLD 683

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-K 438
                D+  L     + Q++RE       H+    + +   V   + Y D  K      K
Sbjct: 684 QLLPIDQWALKKLDELNQKVREGYDAFEFHQVYHAIHNFCVVDMSNFYLDVIKDRLYAEK 743

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +             ++  +  ++   +   A++I++ +
Sbjct: 744 ADGKLRRAAQTAIYTILDAMTRMIAPILAYTADEIWEYM 782



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 16/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+G A    + D + R+  + G    +  G D HG      
Sbjct: 47  EGKPLYVLHDGPPYANGNIHLGTALNKTLKDFIVRYKNMAGFQSPYVPGWDTHGLPTELK 106

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
           A+                    + F +    + R     L     +D+   T +K    T
Sbjct: 107 ARKKAGVDNSSTISDVELRKICREFAEGYIDDQRSQFKRLGGIGEWDNPYITLQKEFEAT 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
              ++ +++ KG IYKG    ++    +    + E+    D  
Sbjct: 167 QIEVFAEMACKGYIYKGLKPVYWCPDCQTALAEAEIEYAEDPC 209


>gi|294340556|emb|CAZ88941.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Thiomonas sp.
           3As]
          Length = 946

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 70/432 (16%), Positives = 138/432 (31%), Gaps = 100/432 (23%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA-------YQDKLLSYYESHPEFIL 188
           + +  V               V+ M  + +F   +           K +          +
Sbjct: 336 FLEKAVPHKNMVPVCARTGQIVEPMLTDQWFVATTKPGPDGKSIAQKAIDAVADGEVKFV 395

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------------- 221
           P    N   +   + ++D  +SR+   WG +IP                           
Sbjct: 396 PENWVNT-YNQWMANIQDWCISRQ-LWWGHQIPAWYGENGEIFVARSEAEARDKASAAGY 453

Query: 222 -----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                 DP  ++  W  +     +T G+ +        F P+ + V G DI+ F    + 
Sbjct: 454 NRSLTRDPD-VLDTWYSSALVPFSTLGWPEPTK-EMDLFLPSSVLVTGFDIIFFWVARMI 511

Query: 275 WPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE-------------- 319
                 +  +P  K V+ HG +L   G+K+SKS GNV+DP+++I+               
Sbjct: 512 MMTTHFTGKVPF-KHVYIHGLVLDAHGKKMSKSEGNVLDPVDLIDGIELAPLLDKRTTGL 570

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+        G++  +D    +     +  N
Sbjct: 571 RKPETAPAVRKATEKEFPGGIPAYGADALRFTFASMATLGRNINFDTKRCEG--YRNFCN 628

Query: 357 GIGNLVSRSVSMI--LKDYDGMIPTPG---------AFTESDESILSVCSRVLQEIRENM 405
            + N     +  +  L+ +D  +   G          F+ +D  I S   R  Q++ +  
Sbjct: 629 KLWNATRFVLMQVDGLEAFDRGMDQCGGDCGPDGYMHFSAADRWIASQLQRTEQQVAQGF 688

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +  +  A   +   V +   D Y +  K  ++    P +        V  +  +  L  
Sbjct: 689 ADYRLDFAAQAIYQFVWDEYCDWYLEIAKT-QIAHGTPQQQRAARRTLVRTLETVLRLAH 747

Query: 464 AFVPKLANKIFD 475
             +P +  +++ 
Sbjct: 748 PIMPFITEELWQ 759



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 19/167 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    +           H+GHA+   + D L R+HR+ G + L+  G D  G       +
Sbjct: 35  KPSFCVQLPPPNVTGTLHMGHAFNQTVMDTLVRYHRMRGDNTLWVPGMDHAGIATQIVVE 94

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                   +  Q+          +   +S++    T + +    
Sbjct: 95  RQLQAAGLSRHDLGRDKFVEKVWEWKQQSGNTITGQMRRMGDSVSWEHEYFTMDDKLSKA 154

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYN 151
               + ++ ++G IY+G     +    ++  +D EV  +  DG  ++
Sbjct: 155 VVETFVQLYEQGLIYRGKRLVNWDPVLKSAVSDLEVESQEHDGFMWH 201


>gi|126696308|ref|YP_001091194.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166231628|sp|A3PCW8|SYL_PROM0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126543351|gb|ABO17593.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 856

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y  +   YP+   H+GH    +I D++ARF R  G  VL   G D  G     AA  
Sbjct: 44  DKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIE 103

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G++  V+  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +Y+ 
Sbjct: 104 RGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYVWTQYLFLELYKAGLVYQK 163

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     +++V          A    V+    + +F R++ Y D+LL   E 
Sbjct: 164 ESEVNWDPIDNTVLANEQVDSEGKSWRSGA---IVEKKLLKQWFLRITNYADELLKDLEK 220

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   ++   +       G
Sbjct: 221 LDNWPERVKIMQDNWIGKSIG 241



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 104/323 (32%), Gaps = 68/323 (21%)

Query: 203 GLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
           G     ++      GI  K   D              Y ++       +  +   W P D
Sbjct: 479 GDNKNWVNTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSKCPNKPFEKIEINKWLPVD 538

Query: 260 LHVIGKDILRFHAIYWPAFL--------LSANLPL------------------------- 286
            +V G +    H +Y   F            + P                          
Sbjct: 539 QYVGGVEHAILHLLYARFFTKALRDNQLFEIDEPFKKLLTQGMVQAAAYKNNKTGKYVSP 598

Query: 287 --------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                   P     +  +    EK+SKS  N IDP  VI++ G D  R F++ +    KD
Sbjct: 599 SDINDLSNPTDPIDNTKLEILFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKD 658

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +    ++         G    +SR   + +     +     ++ + ++S++   +  +
Sbjct: 659 LEWGDTDVE---------GQFRFLSRIWKLYINCAKNVNIKSNSYPDKEKSLIKSMNIAI 709

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +EI  ++ N   + A+++++   + +    +                    + ++ ++  
Sbjct: 710 KEISNDILNNQFNTAISELMKFYNSLSNSINDVN---------------NNLKIDALKTF 754

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
            ILL  F P +A +I+ ++    
Sbjct: 755 CILLAPFAPHIAEEIWHLIGFKK 777


>gi|325109272|ref|YP_004270340.1| valyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969540|gb|ADY60318.1| Valyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 995

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 117/429 (27%), Gaps = 87/429 (20%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESH--------PEFILPIERRNEVISFVKSGLKDLSLSRK 212
           E+  +      +    +  +             F    +         +  L        
Sbjct: 404 EKRDWCISRQLWWGHRIPIWYCETCTKEDLDNAFGDRDDVSYRRDDEDRCWLICAESDLD 463

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS---------------KAKFWP 257
               G       + ++  W  +      T G+ D                       F+P
Sbjct: 464 VDALGEHELIQDEDVLDTWFSSALWPHATLGWPDQTQNPPLNGEAAESNGKNEVLDYFYP 523

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V  +DI+      +         ++P          +   G  +SKS GN +DP++
Sbjct: 524 GSVLVTSRDIITLWVARMVLTGLYNMGDIPFSHVCIHPKILDGFGRTMSKSKGNGVDPMD 583

Query: 316 VIEEVGVDALRYFLVREIACGKDGFY---------------------------------- 341
           +I+  G DA+R+ +       +D                                     
Sbjct: 584 LIDRYGTDAVRFTIASFAGETQDVKLPVGYEDPETGEVIPQELEHTEAKPKEGVKPTVHF 643

Query: 342 ----------------DKDGLKKRVNADLA---NGIGNLVSRSVSMILKDYDGMIPTP-- 380
                           D D    R+ ++         N    +    + + +G  P P  
Sbjct: 644 PKGKRDLQYSSPNYEPDADVPVARMVSERFEYGRNFCNKFWNAARFAMLNLEGYTPGPIQ 703

Query: 381 -GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                  D  ILS  SR + E+   +Q      A   +   V     D Y +  KP    
Sbjct: 704 AKELPLEDRWILSRLSRTIDEVTTCLQRYQFDAATRTLRDFVWNEFCDWYLEMIKPRLRS 763

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           + +   A  V    V V+ QL  LL  F P L  +++  L      R    L Q  +P  
Sbjct: 764 EADKPEAQRV---LVGVLDQLLRLLAPFTPFLTEELWQTLGQLAPERGLP-LPQTAEPAA 819

Query: 498 MLHKTFDPI 506
           ++      +
Sbjct: 820 IIAAWPTAV 828



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 23/176 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I   +       H+GHA    I D+L R+ R+ G + L+  GTD  G       
Sbjct: 34  DKKPHVIMIPLPNVTGALHMGHALNGTIQDLLTRWRRMQGYEALWMPGTDHAGIATQAVV 93

Query: 63  QNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
           +                         + D   +   +    L  S D     F  T +  
Sbjct: 94  ERRMFEQEGLTRHDIGREALVNRIWKWKDSYEKRILNQLKQLGASCDWRRTRF--TLDDV 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                R  + K+ + G IY+G     +    +    DDEV+      ++   H PV
Sbjct: 152 CSKAVRRTFLKLFEDGKIYRGKRLVNWDTYLQTAVADDEVFTEEVAGHFWTFHYPV 207


>gi|299066162|emb|CBJ37345.1| Valine--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 973

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 128/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +S    ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 394 PEGTRFPGRSIAEVALDAVQSGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 451

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  A     ++ G+  +   
Sbjct: 452 AWYDEAGNVYVARTEEEARAQAAAKGHTGAIKRDDDVLDTWFSAALVPFSSLGWPADTPE 511

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 512 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFQTVYVHGLVRDSEGKKMSKSEG 570

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 571 NTLDPVDLIDGISLEPLLAKRTTGLRRPKDAPNVEKRTRKEFPDGIPAFGADALRFTFAS 630

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G++  +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 631 LATLGRNINFDSSRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGMQECVGDCGPEGALH 687

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+ +D  I+S+  RV  E+ +   +         +   V +   D Y +  K  +++   
Sbjct: 688 FSPADRWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWYLELAKV-QIQTGT 746

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 747 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 781



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 55/179 (30%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 43  GRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMQGANTLWVPGTDHAGIATQIVV 102

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        + +++          +   I ++    T + +   
Sbjct: 103 ERQLDAQGISRHDLGRPAFVDKVWEWKEESGSTITRQIRRMGASIDWEREYFTMDPKMSR 162

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               ++ ++ ++G IY+G     +        +D EV    +         P+   + +
Sbjct: 163 AVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGALWHIRYPLAQPDAK 221


>gi|218672951|ref|ZP_03522620.1| leucyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 274

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 6/196 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           REK Y+     YP+ + H+GH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 33  REKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAM 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV    +  QN  + +     + +S D      T +  ++   + L+    +KG +Y+
Sbjct: 93  ERGVHPASWTYQNIASMKAQLKAMGLSLDWSREFATCDVDYYQHQQHLFVDFLEKGLVYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D     +++V  G            V+  E   +FF+++ +   LL   +
Sbjct: 153 KQSKVNWDPVDNTVLANEQVIDG----RGWRSGALVEQRELTQWFFKITDFSQDLLDALD 208

Query: 182 SHPEFILPIERRNEVI 197
           +  ++   +    +  
Sbjct: 209 TLDQWPEKVRLMQKNW 224


>gi|89901153|ref|YP_523624.1| valyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89345890|gb|ABD70093.1| valyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 990

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 80/558 (14%), Positives = 159/558 (28%), Gaps = 123/558 (22%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFT-TG------TDEHGQKIAKAAQNAGVTTKVF 72
           E ++ DV A       R+  L G  V     G       D++  K               
Sbjct: 259 ETMLGDVAAMVHPDDERYQHLIGKHVTLPLCGRTIPVIADDYVDKAFGTGVVKVTPAHDQ 318

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEK------RHHDTCRILWKKISDKGDIYKGCYSG 126
            D        +  +  ++ D  I                 + + K +   G + +     
Sbjct: 319 NDYAVGQRHKLPMICVLTLDAKIDAVAPAAYVGMDRFVARKKIVKDLEALGLLIEVKKHK 378

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               R        E           ++ +P+             +   K +   +S    
Sbjct: 379 LMVPRCARTGQIIEPMLTDQWFVAMSKVSPIDPT--------AKSIAQKAIDAVQSGDVK 430

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY------------------ 226
            +P    N   +   + ++D  +SR+   WG  I    D                     
Sbjct: 431 FVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDENGKVYVARNEAEAQAQAPGK 488

Query: 227 -------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                  ++  W  +     +T G+ +        + P+ + V G DI+ F    +    
Sbjct: 489 TLRRDEDVLDTWYSSALVPFSTMGWPEKTQ-DFDLYLPSSVLVTGYDIIFFWVARMIMMT 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------ 319
              +  +P             +G+K+SKS GNV+DP+++I+                   
Sbjct: 548 THFTGQVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALPELLLKRSEGLRKPE 607

Query: 320 -------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                               G DALR+      + G+   +D    +     +  N + N
Sbjct: 608 TAPAVRKNTEKEFPAGIPAFGADALRFTFASLASLGRSINFDAKRCEG--YRNFCNKLWN 665

Query: 361 LVSRSVSMILKDYDGMIPTPG--------------AFTESDESILSVCSRVLQEIRENMQ 406
             SR V M  +  D  +                   F+ +D  I+S+  R   E+ +  +
Sbjct: 666 -ASRFVLMNCEGQDCGLNEHTKEECAVGGAAHGYLEFSPADRWIVSLLQRAEAEVAKGFE 724

Query: 407 NQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPD------RASTVLYVTVEVIRQ 457
              +    + +   V     D Y +  K   +  K N D      +        +  +  
Sbjct: 725 EYRLDNVASTIYDFVWNEFCDWYLEIAKVQIQQGKDNQDPQTGLAQQRATRRTLIRTLET 784

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L    +P +  +++ 
Sbjct: 785 ILRLAHPVIPFVTEELWQ 802



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 62/172 (36%), Gaps = 22/172 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GHA+   I D L R+HR+ G + ++  GTD  G       + 
Sbjct: 66  EAFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGDNTVWIPGTDHAGIATQIVVER 125

Query: 65  AGVTTKV---------FVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                KV         FV +                R M D +D S + F  T + +   
Sbjct: 126 QLQDQKVSRHDLGRKNFVSKVWEWKEKSGNTITTQMRRMGDSVDWSREYF--TMDPKLSK 183

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T    + ++ ++G IY+G     +    ++  +D EV    +  +      P
Sbjct: 184 TVTETFVQLYEQGLIYRGKRLVNWDPVLQSAVSDLEVESEEEDGFLWHILYP 235


>gi|158316845|ref|YP_001509353.1| isoleucyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112250|gb|ABW14447.1| isoleucyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 1081

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 117/382 (30%), Gaps = 19/382 (4%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                  Y    +    L  E    D    +  +G+Y     N V W       +  +  
Sbjct: 432 YYPLPSWYIRTTAVRERLLAENARTDWHPERIREGRYGEWLRNNVDWALSRN-RYWGTPL 490

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIM 228
                    SH   +  +   +E+     S L                  +       ++
Sbjct: 491 PVWRCEADPSHLTCVGSLAELSELTGTDHSTLDPHRPFVDDVTLPCPTCGETARRVPEVI 550

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            VW D+        G         AK +PA       D     F+ +     L+      
Sbjct: 551 DVWYDSGAMPFAQWGAPHRNADEFAKQYPAQYICEAIDQTRGWFYTLMAVGTLVFDRSSY 610

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              +     +  +G K+SK +GNV+DP ++ +  G DA+R+ ++   +   D     + +
Sbjct: 611 ETVLCLGLLLDAEGRKMSKHVGNVLDPFDLFDRHGADAVRWLMLAGGSPWSDRRVSHESI 670

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDY--------DGMIPTPGAFTESDESILSVCSRVL 398
           +  V   L          ++     D+              P      D   LS  +  +
Sbjct: 671 EDIVRKILLTYWNTASFFALYAGAADWCPTGADGSGEGAAAPAERPVLDRWALSELADTV 730

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            E+   ++     RA  ++   V ++  ++  +        +P+  +T        +  L
Sbjct: 731 AEVDAALEGFDALRAGRRIARFVDDLSNWYVRRSRRRFWAGDPNALAT----LYTCLDGL 786

Query: 459 AILLQAFVPKLANKIFDILFVA 480
             ++  F P L + ++  LF  
Sbjct: 787 TRVMSPFTPFLTDWLWSRLFAG 808



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA----- 65
               N +P  H  H    +  D+  R+  + G  V    G D HG  +  A +       
Sbjct: 56  PPTANGKPGAH--HVEARVFKDLFPRYRTMKGYHVPRRAGWDCHGLPVELAVEKELGFTS 113

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +  V ++  +F  M + +   +  D   RT +  + ++     K
Sbjct: 114 KSDIEDYGIAEFNERCRESVLRHVADFSAMTERMGYWVDLDGAYRTMDTSYIESVWWSLK 173

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           +I DKG + +      Y  RDE   +D EV +G 
Sbjct: 174 QIFDKGLLVEDFRVTPYCPRDETPLSDHEVSQGY 207


>gi|332109883|gb|EGJ10511.1| valyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 944

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 66/420 (15%), Positives = 131/420 (31%), Gaps = 99/420 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFF-------RLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                    V+ M  + +F           +   K +    S     +P +  N   +  
Sbjct: 344 PRCERTGQIVEPMLTDQWFVAVNKPGADGKSIAAKAIDAVSSGQVRFVPEQWVNT-YNHW 402

Query: 201 KSGLKDLSLSRKTFDWGIKIP-------------------------------DDPQYIMY 229
            + ++D  +SR+   WG +IP                                  + ++ 
Sbjct: 403 MNNIQDWCISRQ-LWWGHQIPAWYGTGGEMFVARSEEEARERAAAAGYTGELKRDEDVLD 461

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +     +T G+ D     +  F P+ + V G DI+ F    +       +  +P  
Sbjct: 462 TWYSSALVPFSTLGWPDKTV-EQDLFLPSSVLVTGFDIIFFWVARMIMMTTHFTGKVPFR 520

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------------ 317
                      +G+K+SKS GNV+DP+++I                              
Sbjct: 521 DVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIELPALLDKRTTGLRRPETAPRVRKETE 580

Query: 318 -------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                     G DALR+ +    + G++  +D    +     +  N + N  +R V M  
Sbjct: 581 KEFPAGIPGFGADALRFTMASYASLGRNINFDAKRCEG--YRNFCNKLWN-ATRFVLMNC 637

Query: 371 KDYDG-------------MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +  D                     F+ +D  I+S   RV Q + +      +      +
Sbjct: 638 EGQDCGLGEQADAACASGSCGEYMTFSPADRWIVSELQRVEQAVAQGFTEYRLDNVANTI 697

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + V +   D Y +  K  ++   +           + V+  +  LL    P +  +++D
Sbjct: 698 YAFVWDEYCDWYLEIAKV-QIATGDAAAQRATRRTLIRVLETVLRLLHPIAPFITAELWD 756



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 18/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA+   I D L R+HR+ G + L+  GTD  G      
Sbjct: 33  TAKPSFCIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGFNTLWVPGTDHAGIATQIV 92

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
            +                        +   +          L   +S+D    T + +  
Sbjct: 93  VERQLQAVGESRHELGRKNFVARVWDWKHASGATITRQMRRLGDSVSWDHEYFTMDDKLS 152

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                 + ++ ++G IY+G     +    ++  +D EV    +  +      P++
Sbjct: 153 RVVTETFVRLYEEGLIYRGQRLVSWDPVLQSAVSDLEVASEEEDGFLWHIRYPLE 207


>gi|124266329|ref|YP_001020333.1| putative valyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124259104|gb|ABM94098.1| putative valyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 941

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 127/418 (30%), Gaps = 96/418 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSA-------YQDKLLSYYESHPEFILPIERRNEVISFV 200
                    V+ M  + +F  +S           K +    S     +P    N    ++
Sbjct: 344 PRCARTGQVVEPMLTDQWFVAVSKAGPDGRSIAQKAIDAVASGEVKFVPENWVNTYDQWM 403

Query: 201 KSGLKDLSLSRKTFDWGIKIP-------------------------------DDPQYIMY 229
           K  ++D  +SR+   WG +IP                                  + ++ 
Sbjct: 404 K-NIQDWCISRQ-LWWGHQIPAWYGSGGELFVARSEDEARTKARAAGYVGALTRDEDVLD 461

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +     ++ G+          F P+ + V G +I+ F    +       +  +P  
Sbjct: 462 TWYSSALVPFSSLGWPARTK-ELELFLPSSVLVTGYEIIFFWVARMIMMTTHFTGRVPFR 520

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEV------------------------------- 316
                      +G+K+SKS GNV+DP+++                               
Sbjct: 521 TVYIHGMVRDSEGKKMSKSEGNVLDPVDLIQGVDLDTLVKKSTTGLRKPETAPKVAARVK 580

Query: 317 ------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
                 +   G DALR+ +    + G++  +D    +     +  N + N  +R V M  
Sbjct: 581 KEFPEGMPAYGADALRFTMASYASLGRNINFDTKRCEG--YRNFCNKLWN-ATRFVLMNC 637

Query: 371 KDYDGMIPTPGA----------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  D       A          F+ +D  I     R+   + +      +      V S 
Sbjct: 638 EGQDCGFADHTAEQCVPGGYLDFSNADRWITGELQRIEAAVEKAFAEFRLDNVANAVYSF 697

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V +   D Y +  K  ++   +           + V+  +  LL    P +  +++  
Sbjct: 698 VWDEYCDWYLEIAKV-QIAVGDDAAKRATRRTLIRVLETVLRLLHPLTPFITEELWQA 754



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 34  GKSSFAIQLPPPNVTGVLHMGHAFNQTIMDALTRYHRMRGDNTLWVPGTDHAGIATQIVV 93

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +++   
Sbjct: 94  ERQLEQQGQSRHDLGRQSFVAKVWEWKEHSGSTITQQMRRVGASVDWRHEYFTMDEKLSP 153

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + ++ ++G IY+G     +    ++  +D EV    +  +      P+
Sbjct: 154 VVTDTFVQLYEQGLIYRGKRLVNWDPVLKSAVSDLEVESEEEDGFLWHIRYPL 206


>gi|15639443|ref|NP_218893.1| isoleucyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025684|ref|YP_001933456.1| isoleucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094404|sp|O83466|SYI_TREPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511520|sp|B2S348|SYI_TREPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3322738|gb|AAC65439.1| isoleucyl-tRNA synthetase (ileS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018259|gb|ACD70877.1| isoleucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 1091

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/416 (13%), Positives = 124/416 (29%), Gaps = 36/416 (8%)

Query: 96  RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           R      +      +  +    D               +RD  +       +        
Sbjct: 428 RCASPLIYRAVHSWFVAVEKIKDKMLAANASICWQPSHIRDGRFGKWLVCARDWAISRDR 487

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              NP+                        S  +         E +      +  +  + 
Sbjct: 488 YWGNPLPIWRCVHCG---------ATDCIGSRTQLYERSGMLLEDLHKHVVDMVTIPCAC 538

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            +    +        ++  W ++         Y         +++PA     G D     
Sbjct: 539 GSVMRRVP------EVLDCWFESGAMPYAQQHYPFEHATDFERYFPAHFISEGLDQTRGW 592

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   A  L         + +   +   G+K+SK+L N  DP EV++  G DALR FL
Sbjct: 593 FYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRNYADPNEVMDRYGADALRLFL 652

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA------ 382
           VR       D  Y  +G+K  +   +     +         +   D  +           
Sbjct: 653 VRSAVVRADDLKYSDEGVKDILKTVIIPLWNSYSFYVTYANIDGIDPPVCAKVDGMGQAV 712

Query: 383 -------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                      D  ILS+  +++Q+I   +    + +    ++S V +++ ++  +    
Sbjct: 713 TRLATHLNNPLDRWILSLTEKLVQDIACALDAYDVSKVADPIVSYVDQLNNWYIRRSRRR 772

Query: 436 LKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             K+ N +           V+++  + +   VP +   I+  +  AD+ +     D
Sbjct: 773 FWKSINDEDKRCAYNTLYCVLKRCVLAIAPVVPFITESIWQNIRAADDVQSVHLAD 828



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 53/159 (33%), Gaps = 19/159 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +         +    PH GH     I D++ R+  + G  V    G D HG  I    + 
Sbjct: 39  KSYVFFDGPPFATGLPHFGHFVPSTIKDIIPRYQTMRGAYVPRRFGWDCHGLPIEHLIEQ 98

Query: 65  AGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 +  V +  + ++     L   + +D+  +T +  + ++
Sbjct: 99  ELNLNSKSDVESYGVSAFNAACRSSVLRYVKEWQRTLTRLGRWVDFDNDYKTMDVCYMES 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
              +  ++  +  +Y+G     Y  R     ++ E+  G
Sbjct: 159 VWWVVAQLWQRKLLYEGYKILPYCPRCATALSNHELNLG 197


>gi|310790789|gb|EFQ26322.1| valyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 1092

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 114/362 (31%), Gaps = 45/362 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y +  E        N+     K+  +  + ++          +  
Sbjct: 552 WCISRQLWWGHRCPVYLAKVEGEKSDSLDNKQWFAGKTREEAEAKAKAALPGKKFTLEQD 611

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +       + +P  +   G DIL F    +      L+ 
Sbjct: 612 EDVLDTWFSSGLWPFSTLGWPNKTQ-DLEELYPTSVLETGWDILFFWIARMVMLGIKLTG 670

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV---------------------- 320
            +P  +          +G K+SKSLGNVIDP++ I  +                      
Sbjct: 671 QVPFTEVYCHSLVRDSEGRKMSKSLGNVIDPLDAIAGIKLEDLHAKLRVGNLHPSEVAKA 730

Query: 321 ---------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G D+LR+ +    +   D  +D             N I       
Sbjct: 731 EKYQKSAFPDGLPRNGADSLRFTMAALTSTSGDVNFDVK--VMTGWRKFCNKIWQASKYV 788

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
           +  +  D+          T ++  IL   +   +EI   + ++    A   V   +    
Sbjct: 789 LGKLPPDFVPAKEPAVGVTLAERWILHKLNTAAKEINAALADRDFQHATGIVYQYILNFL 848

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K   ++   P+ A++ +      +     ++  F P +  +++  L    ++
Sbjct: 849 CDVYIENSKS-IIQDGTPEEAASAIQTLYTALEGALTMIHPFTPFITEELWQRLPRRPDD 907

Query: 484 RC 485
           + 
Sbjct: 908 KT 909



 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 19/155 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I+          H+GHA    + D++ R++R+ G   L+  G D  G       +N 
Sbjct: 170 KFVIAHPPPNVTGSLHLGHALGDSLQDIMIRWNRMLGKTTLWIPGCDHAGISTQSVVENM 229

Query: 66  GV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +           +  S+D      T +       
Sbjct: 230 LWRREGKTRHDLGREDFVEKVWAWKGEYHDKINAALRKMGGSFDWTREAFTMDANLSAAV 289

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S R     ++ EV
Sbjct: 290 AETFVRLFEEGTIYRANRLVNWSSRLTTALSNLEV 324


>gi|289578630|ref|YP_003477257.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528343|gb|ADD02695.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 932

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 114/310 (36%), Gaps = 27/310 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 TCECGSIRFRKETDIMDVWFDSGSSHAAVLQTHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN +DP +VI+E G D LR + V
Sbjct: 569 QSSLLTSVATRGKAPYKNVLTHGFVVDGEGRKMSKSLGNGVDPADVIKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    K+ LK+    +    I N     +S +   D D  +       E D+ 
Sbjct: 629 SAD-FTSDMRISKEILKQ--MTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL---KKTNPDRA 444
            L   +RV++E+ E       +  L  V +   V     Y D  K         +   RA
Sbjct: 686 ALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYPAASKERRA 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------ 498
           +        ++  L  L+   +   + +I+  +    +N  F+S+     P         
Sbjct: 746 AQT--TLYIILDTLVRLIAPVLTFTSEEIWSYMKHDSQN-NFESVQLADWPEVQEKYNNP 802

Query: 499 -LHKTFDPIF 507
            + + ++ +F
Sbjct: 803 YIIEKWEKLF 812



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G    +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYYAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V+        K F        +     L +   +D+   T    +    
Sbjct: 105 AIKTLGIKRHEVSPTEFRKVCKDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|262199611|ref|YP_003270820.1| leucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262082958|gb|ACY18927.1| leucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 854

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K YI     YP+    H+GH    +  DV+AR  R+ G +VL   G D  G    +
Sbjct: 29  RTKPKFYILDMFPYPSGAGLHVGHPKGYVATDVVARAKRMMGFNVLHVMGWDSFGLPTER 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G +      +N   F++  + L +SYD    + T+++ ++   + ++ K+ +KG 
Sbjct: 89  QAVREGRSPAEITARNVGRFKEQLENLGLSYDWSRELATSDEAYYRWTQWIFLKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G     Y    +PV+    + +  R++AY D+LL 
Sbjct: 149 AYQAEVAVNWCPALGTVLANEEVQDGK----YVETGDPVERRSMKQWMLRITAYADRLLD 204

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         E +   I   +
Sbjct: 205 GLEDLDWPEGIKEMQRHWIGRSR 227



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 95/303 (31%), Gaps = 67/303 (22%)

Query: 224 PQYIMYVWIDALTNYLTTTGYL----DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL              G +  + P DL+V G +    H +Y   + 
Sbjct: 494 ETNTMPQWAGSCWYYLRFITPKLDTAAWDPGEERYWMPVDLYVGGAEHATLHLLYSRFWH 553

Query: 280 LSAN------LPLPKKVFSHGFILHKG--------------------------------- 300
                      P P +   +  ++H+                                  
Sbjct: 554 HVLYDLGLVSTPEPFQRLFNQGMIHRTSYRDAAGKYYYEEEVDKRGDSYVAKADGTEVFP 613

Query: 301 --EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
             EK+SKS  NV++P ++  E G DALR + +          ++  G+         + +
Sbjct: 614 KLEKMSKSKYNVVNPDDMCAEYGADALRLYELFMGPLEDGCEWETAGVAG--TRRFLDRL 671

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             LV  + S    + D +          D  +       ++++ E +++   + A+++++
Sbjct: 672 YRLVVDTDSDSGTESDKLASKLVDEDTDDRELERALHAAIKKVSEAIESLRFNTAVSEMM 731

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+E               T  +R           +     +L  F P L  +++  L 
Sbjct: 732 MFVNEA--------------TKAERVPKAW------METFVRVLAPFAPHLGEELWRRLG 771

Query: 479 VAD 481
             D
Sbjct: 772 HED 774


>gi|325688602|gb|EGD30619.1| leucine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 858

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRARGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 230

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 231 DLEELDWPESIKDMQRNWI 249



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 512 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLRAWLPVDIYIGGAEHAVLHLLYARFWH 571

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 572 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 631

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 632 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 683

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 684 -KFLDRVYRLLN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 734

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 735 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 774

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 775 QTGESISYVTWPT 787


>gi|315638284|ref|ZP_07893465.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481631|gb|EFU72254.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 808

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYAIGDALARYYRKMGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKTWTYENIAYMKKELFSLGFSFSKKRILATSDPIYTKFEQEFFIKMYEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
                +   D+    +++V  G          + V      GY+ +++AY  + L     
Sbjct: 151 EARVNWCENDQTVLANEQVEDGK----CWRCGHEVSQKVMPGYYVKITAYAEELLKELEG 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LRGKWPTQVLTMQENWIGRSEGL 229



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 101/271 (37%), Gaps = 44/271 (16%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLS 281
           W  A       T    + +   AK+W   D ++ G +    H +Y   F         L 
Sbjct: 499 WYYARFASDEKTWENVSIEQKSAKYWLGVDEYIGGIEHAILHLLYARFFQKALRDLGYLD 558

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P   ++ + G +L  G K+SKS GNV++P ++I++ G D  R F++      K+  +
Sbjct: 559 GDEPF-SRLLTQGMVLKDGAKMSKSKGNVVNPDDIIKKYGADTARLFILFAAPPAKELEW 617

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           + D L+          I  L  R++ +     + +  +  A ++ ++         L++ 
Sbjct: 618 NDDALEGA-----YRFIVRLYDRALKLESGALEEI--SQAALSKEEKYARLKVYEALKKS 670

Query: 402 RENMQN-QLIHR---ALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +E        +    A  + ++ +    ++  +                       E   
Sbjct: 671 QEVYAKSFAFNTLIAACMEALNAIGACKNQALER----------------------EAFF 708

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQ 487
            +  +L+  +P +  ++ + LF  +  +  +
Sbjct: 709 IILNILEPIIPHICFELSEKLFHFENFKKLE 739


>gi|238882416|gb|EEQ46054.1| valyl-tRNA synthetase, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 1079

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 138/439 (31%), Gaps = 63/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R+    ++  K +       +          D        + Y +  ++ K A     
Sbjct: 454 DARYKVIEQLKQKGLFVDQKDNEMTIPVCSRSGDIIEPLLKPQWYVDQKQMAKDAIEVVK 513

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +        E  YF  L   QD  +S                E          +  ++
Sbjct: 514 RGEIVINPKTSEAEYFQWLENIQDWCISRQLWWGHRCPVYFVNIENEQNHDKLDNNYWVA 573

Query: 211 RKTFDWGIKIPDD-----------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            +T +   K   +            + ++  W  +    ++T G+ +        F P  
Sbjct: 574 GRTEEEAFKKAQEKFPNKKFTLEQDEDVLDTWFSSGLWPISTLGWPNETK-DMELFNPMS 632

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +   +  L+  +P  K+VF H  +   +G K+SKSLGNV+DP++V
Sbjct: 633 MLETGWDILFFWVSRMILMSIKLTGKVPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDV 691

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +  L   L+      ++                                      
Sbjct: 692 INGIPLQGLHDKLLTGNLDPRELKKATEGQKLSYPNGIPECGTDALRFALCAYSTGGRDI 751

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQ 399
           + D L+        N I       +  + +DY     +   G  +  ++ IL   S   +
Sbjct: 752 NLDILRVEGYRKFCNKIYQATKFVLGRLGQDYIPPTTSELTGKESLVEKWILHKLSHAAK 811

Query: 400 EIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              E+++ +    A   + +      D Y +  K      T P++  +        I   
Sbjct: 812 LTNESLEARNFGDATNHIYNFWYDLCDVYIENSKSLIQDGT-PEQKKSAQDTLYTCIDGA 870

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P +  +++  L
Sbjct: 871 LRLIHPFMPFITEEMWQRL 889



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           HIGHA  + I D L R++R+ G   LF  G D  G     
Sbjct: 148 IKKEGCFSIPCPPPNVTGALHIGHALTVSIQDTLIRWNRMQGKTTLFIPGFDHAGIATQS 207

Query: 61  AAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         + ++  +  ++    L  SYD      T    
Sbjct: 208 VVEKQIWAKEQKTRHDYGREKFIEKVWEWKEEYHQRIKNQFKKLGSSYDWSREKFTLNPD 267

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   + ++ + G IY+      +S++
Sbjct: 268 LSQAVTEAFVRMHEDGTIYRASRLVNWSVK 297


>gi|325187731|emb|CCA22276.1| PREDICTED: similar to isoleucyltRNA synthetase puta [Albugo
           laibachii Nc14]
          Length = 1175

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 533 VFDCWFESGSMPYAQQHYPFENQEKFEAGFPADFIAEGLDQTRGWFYTLMVISTALFDKP 592

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                + +   +   G K+SKSL N  DP  +IEE G DALR +L+       +    ++
Sbjct: 593 AFKNLIVNGLVLAEDGRKMSKSLRNFTDPTALIEEYGADALRLYLINSPVVRAEPLKFQE 652

Query: 345 GLKKRVNADLANGIGNLVSRSV--SMILKDYDGMIPTPGAFTES------DESILSVCSR 396
              K V  +L     N        +M L+     + TP            D  I++    
Sbjct: 653 AGVKGVIRELFLPWYNAARFFAQNAMRLEKVTNKVFTPTREEAFQSDNVMDSWIIAALHN 712

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVD-RYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ +R+ M    ++  + +++  + ++   Y    +P     T  + A T L    EV+
Sbjct: 713 LIKFVRDEMAAFRLYTVVPRLVEFIDQLTKWYVRLNRPRLKGATGSEAAQTALSALYEVL 772

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L+ L+  F P LA  ++  L
Sbjct: 773 YALSKLMAPFTPFLAEFMYQFL 794



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 58/237 (24%), Gaps = 44/237 (18%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+         +    PH GH     I D + RF    G  V    G D HG  +   
Sbjct: 42  KNRKPFTFFDGPPFATGLPHHGHILAGTIKDTVTRFAHQTGHHVERRFGWDCHGLPVESE 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                                            I+T E           + +    D Y 
Sbjct: 102 INKKLK---------------------------IKTKE-----------QVLEMGIDKYN 123

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               G        Y  + E+     G  +    N  + ME        + +Q        
Sbjct: 124 SECRGIV----TRYTKEWEITVKRIG-RWIDCENDYKTMEPWYMESVWNVFQKIFEKELV 178

Query: 182 SHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                ILP     N  +S  ++ L     S  +      + +DP      W      
Sbjct: 179 YRGYKILPYSTTINTSLSNFEANLDYRDTSDPSVVVNFPLKEDPSVAFVAWTTTPWT 235


>gi|289621798|emb|CBI51709.1| unnamed protein product [Sordaria macrospora]
          Length = 1007

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 5/200 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y+     YP+   H+GH     IADV+ARF  L G  VL   G D  G     AA
Sbjct: 87  DEKNKYVLPMFPYPSGYLHLGHLRVYTIADVIARFQTLQGHKVLLPMGWDAFGLPAENAA 146

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+    +   N    ++  DV++    +D  + T +   +   + ++  + +KG  Y
Sbjct: 147 IERGINPATWTKANIAKMKEQLDVMNGSWDWDCELATCDPDFYKHTQKIFLALHEKGLAY 206

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y   D+    +++V          A+   V+  + + +F ++S +++ LL   
Sbjct: 207 QAEAEVNYDPVDKTVLANEQVDANGRSWRSGAK---VEKRKLKQWFLKISEFRESLLKDL 263

Query: 181 ESHPEFILPIERRNEVISFV 200
           ++  +     ER   +    
Sbjct: 264 DTLAKDEAWPERVLAMQKNW 283



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 27/220 (12%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK V +        EK+SKS  N +DP   I + G DA R  ++ +    +   +D++ +
Sbjct: 690 PKVVATGAIASVSYEKMSKSKHNGVDPTAFIAQYGADATRAHMLFQAPVSEILDWDENKI 749

Query: 347 --KKRVNADLANGIGN---------------LVSRSVSMILKDYDGMIPTPGAFTESDES 389
               R  + + + +                   + SV    + Y           E D S
Sbjct: 750 TGVTRWLSRVYDLVQKTAAASSTASESSVSSTSTSSVKTFFEQYQQQNNLSTDSAEYDAS 809

Query: 390 --ILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
             +     R +  +  +      ++  ++ ++SL    +   +   P     T     + 
Sbjct: 810 VTVWREVQRTISSVTTSYNKVYTLNTVISDLMSL---TNLIIN---PSSSSSTAASADAH 863

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              +  E +  L  L+    P  A + +  L+       F
Sbjct: 864 -PLIKHEAVSALIRLMAPIAPAFAEECWSTLYPNGTTSLF 902


>gi|71894314|ref|YP_278422.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|90101534|sp|Q4A6B0|SYV_MYCS5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71851102|gb|AAZ43711.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 832

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 69/405 (17%), Positives = 160/405 (39%), Gaps = 46/405 (11%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           ++    +    +   + +    +     +D +    +  Y +  ++ ++ +    +F ++
Sbjct: 304 YQWHKMERFEAREKMAQFLEENNYLIKAEDSIS---NVSYSDRSNSVIETLMLPQWFIKM 360

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI--------- 220
             ++D +L    S  +      R    +    + + D ++SR+   WG +I         
Sbjct: 361 DHFRDLILKNLSSKEKIKFLPNRYKNNLKRWMNNVYDWNISRQ-LWWGHQIPAWYKDGKM 419

Query: 221 ----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF 270
                           ++  W  +     +   + ++    K +++P+ L V G D++ F
Sbjct: 420 KVQAESPGQGWVQDSDVLDTWFSSGIAAFSFFKWENDDAFFK-RYYPSSLMVSGYDLIFF 478

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
               + + +   +   P  +           G K+SKSL N IDPIEV+E+ G DALR+F
Sbjct: 479 WISRMIFLSLEFTNQRPFKEVFMHGLIRDKDGRKMSKSLNNGIDPIEVVEKYGSDALRWF 538

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE 388
           L+   A G D  Y+++ ++      ++N + N+     SM   + +         +E  +
Sbjct: 539 LITNTAPGMDIRYNQEKIESAW--KISNKLYNVALYISSMPDNNLE---AKSSKLSEQSK 593

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAST 446
            IL+  S + ++I++  +         ++   +       Y +  K   +K         
Sbjct: 594 WILNKLSALNKQIQKVFKTYDFSIIGVEIYQFIFTDLSSWYIELIKSLNIKNE------- 646

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                + V +++ I+L  F+P  ++ +F+ L+  +E    QS  +
Sbjct: 647 ----AMYVFKKILIMLHPFLPFTSDYLFNKLY--NEELLEQSWPK 685



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 61/160 (38%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +++   I         + H+GHA +  I D + RF +L G DVL+  G D  G       
Sbjct: 30  DKKPFSILLPPPNVTGKLHLGHALDSYIPDTIIRFKKLSGYDVLWLPGMDHAGIATQSKV 89

Query: 63  QNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
           ++                        + + + + FR     L ++ D  +   T  K  +
Sbjct: 90  ESELYKQNKLTRHDLGKEKFLAEVWKWKEIHEKLFRQQWQTLGLALDYSNEAFTLSKEVN 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    ++ ++ ++G IYK   +  + +  +   ++ EV  
Sbjct: 150 EKVIKIFVELYNRGYIYKKNRAVSWDINLQTAISNIEVIN 189


>gi|167037288|ref|YP_001664866.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040517|ref|YP_001663502.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914564|ref|ZP_07131880.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724200|ref|YP_003903951.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115704|ref|YP_004185863.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|254782449|sp|B0K8R7|SYI_THEP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782450|sp|B0K2W1|SYI_THEPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166854757|gb|ABY93166.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856122|gb|ABY94530.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889499|gb|EFK84645.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581261|gb|ADN54660.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928795|gb|ADV79480.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 932

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 25/309 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 TCECGSTKFRKETDIMDVWFDSGSSHAAVLQTHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN IDP +VI+E G D LR + V
Sbjct: 569 QSSLLTSVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVIKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    ++ LK+    +    I N     +S +   D D  +       E D+ 
Sbjct: 629 SAD-FTSDMRISQEILKQ--MTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTNPDRAS 445
            L   +RV++E+ E       +  L  V +   V     Y D  K   +    T+ +R  
Sbjct: 686 ALFRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYPATSKER-R 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------- 498
                   ++  L  L+   +   + +I+  +    +N  F+S+     P          
Sbjct: 745 AAQTTLYIILDTLVRLIAPVLTFTSEEIWSYMKHDSQN-NFESVQLADWPQVQEKYNNPY 803

Query: 499 LHKTFDPIF 507
           + + ++ +F
Sbjct: 804 IIEKWEKLF 812



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V+        + F        +     L +   +D+   T    +    
Sbjct: 105 AIKTLGIKRHEVSPTEFRKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|159900932|ref|YP_001547179.1| leucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|254782502|sp|A9AZ11|SYL_HERA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|159893971|gb|ABX07051.1| leucyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 814

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 4/196 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y  T + YP+   HIGH Y M  +DV AR+ R+ G +V F  G D  G     A
Sbjct: 30  SDKPKHYAVTMLPYPSGNLHIGHWYAMSPSDVHARYMRMRGYNVFFPMGFDAFGLPAENA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  + +   N    R     +   + +D  I + +  ++   +  + +   +G  
Sbjct: 90  AIKNNLDPRKWTYSNIEYMRGQLQSMGMMVDWDQQIVSADPEYYRWNQWFFIQFFKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +  +       ++V    D +      + V   + + ++F++++Y D+LL++
Sbjct: 150 YKKFSAVDWCPKCNTTLAREQVV--GDERRCERCDSLVTKRDLDQWYFKITSYADELLNF 207

Query: 180 YESHPEFILPIERRNE 195
            E      +   +RN 
Sbjct: 208 SELDWPERITTMQRNW 223



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 109/304 (35%), Gaps = 42/304 (13%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LP     +        L            G +   D    M  ++D  + Y         
Sbjct: 457 LPDSVDFKPTGESPLKLHPTWRFTTCPTCGGEAERDTD-TMDTFVD-SSWYQVRYLSPHE 514

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHG 294
            +         K+ P D +  G++    H +Y   +         +SAN P+ + +    
Sbjct: 515 TNAPFTKAIADKWLPVDQYTGGREHAVMHLLYTRFWWKAMRDMGLVSANEPMTRLINQGV 574

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +     K+SKS GNVIDP  ++ + G D +R FL+      + G ++  G++       
Sbjct: 575 ILGEDSNKMSKSRGNVIDPDMLVAQYGADTVRTFLMFIGPWEQGGPWNNRGIE------- 627

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G    + R+  ++            A T     +     R+++++ +++Q    + A+
Sbjct: 628 --GCVRFLDRAWRVVTDTPQRHDAVGDAST-----LERQTHRIIKKVGDDLQRFAFNTAI 680

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++  V+E+ +           +      +T      E    L +LL    P +A +++
Sbjct: 681 AGLMEFVNELMK----------VRETDVYGTTTWRKATE---TLTLLLAPIAPHIAEELW 727

Query: 475 DILF 478
           + L 
Sbjct: 728 EFLG 731


>gi|323353523|ref|ZP_08088056.1| leucine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121469|gb|EFX93232.1| leucine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 858

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRARGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 230

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 231 DLEELDWPESIKDMQRNWI 249



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 100/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 512 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLRAWLPVDIYIGGAEHAVLHLLYARFWH 571

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 572 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 631

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 632 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 683

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 684 -KFLDRVYRLLN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 734

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 735 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 774

Query: 479 VADENRCF 486
              E+  +
Sbjct: 775 QTGESISY 782


>gi|15622274|dbj|BAB66266.1| 742aa long hypothetical valyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 742

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 129/338 (38%), Gaps = 23/338 (6%)

Query: 158 QWMEEEGYFFRLSAYQDK--LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W++   + + +S  +     L ++      ++P    +  +   K+             
Sbjct: 337 DWIKSLEWDWNISRQRVYGTPLPFWYCDNNHLIPAREEDLPLDPTKTKPPYEKC----PQ 392

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G+ +      +  VWID+    +              K +PA + + G DI+R    Y 
Sbjct: 393 CGLPLKPVTD-VADVWIDSSVT-VIYLTGFYTDKRKFEKTFPASVRLQGTDIIRTWLFYT 450

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +   +L+ N+P  + + +   +   G ++SKS GNV++P++ ++E G D++R  L+ + 
Sbjct: 451 FFRTLVLTGNIPFKEVLINGQVLGPDGTRMSKSKGNVVNPLDKVDEFGADSIRLTLL-DA 509

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G D  +  + +  R    L   + N    S   I K        P      D  IL  
Sbjct: 510 RIGDDFPFKWETV--RGKKLLLQKLWNAGRLSYPFIGKK---KFDRPSNLHPIDRWILQE 564

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             R +++  E   N   ++ +  + S   E   D Y +  K     +       + LY  
Sbjct: 565 HKRFVKKSIEAYNNYDFYQVVESLYSYFWETIADEYLELIKHRLFAED-----LSALYTL 619

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             V + L I+L    P +  ++++ L+    +   + L
Sbjct: 620 SRVFKDLLIILHPIAPHITEEMYNRLYGDKISIILEGL 657



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 14/136 (10%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK----------- 70
           +GHAY + IAD + RF RL G +VL   G D  G       Q      K           
Sbjct: 1   MGHAYWVTIADTIGRFKRLQGYNVLLPQGWDTQGLPTELKVQYRLKIPKENRELFLKKCV 60

Query: 71  VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
            + +   +  ++    L     ++ +  RT E  +    +    ++   G I       +
Sbjct: 61  EWTEDMIKKMKEAMIRLGYRPEWERYEYRTYENSYRKIIQKSLLEMYKLGLIEIREGPVY 120

Query: 128 YSLRDEAYYNDDEVYK 143
           +  + E      EV  
Sbjct: 121 WCPKCETALAQSEVGY 136


>gi|283798396|ref|ZP_06347549.1| leucine--tRNA ligase [Clostridium sp. M62/1]
 gi|291073981|gb|EFE11345.1| leucine--tRNA ligase [Clostridium sp. M62/1]
          Length = 803

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLRGKYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N +N +   +       +D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAKSTAENVKNIKRQINEIAAIYDWDMEVNTTDPSFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G           PV       +  +++ Y ++LL+ 
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTPVTKKNLRQWMLKITDYAERLLND 203

Query: 180 YESHPEFILPIERRNEVI 197
            +         + ++E I
Sbjct: 204 LDKLDWPEKVKKMQSEWI 221



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 92/237 (38%), Gaps = 40/237 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            K+ P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 522 DKYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGVIDFDEPFKKLFNQGMITGKNGIKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G++    +   N   NLV  
Sbjct: 582 KSKGNVVSPDDLVRDYGCDSLRLYELFVGPPELDAEWDDRGIEGV--SRFLNRFYNLV-- 637

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              M  KD D             + ++ +  +++ +I +  +   ++  ++  +      
Sbjct: 638 ---MSSKDKDIKET---------KEMVKLRHKLVYDIEQRFEQFSLNTVISGFMEYN--- 682

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++  +  K    K+   D+         E ++   +LL  F P L  +++  L   D
Sbjct: 683 NKLIELSK----KEGGIDK---------ETLKTFVVLLAPFAPHLGEELWRELGGTD 726


>gi|148653975|ref|YP_001281068.1| valyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148573059|gb|ABQ95118.1| valyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 976

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 136/419 (32%), Gaps = 91/419 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + ++  +       +   E      +P + +N +     + ++D  +SR+   W
Sbjct: 388 VEPWLTDQWYVAVEQLAKPSIEAVEDGRIEFVPAQYKN-MYMAWMNNIEDWCISRQ-LWW 445

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D    +YV                            W  +     +T G+ D
Sbjct: 446 GHRIPAWYDNDDNIYVARDEAEVRSKYNLDDSVELRQDEDVLDTWFSSGLWTFSTLGWGD 505

Query: 247 NPDGSKAK--FWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
                KA   F P  + V G DI+ F         +           +P           
Sbjct: 506 ESQDQKALQTFHPTSVLVTGFDIIFFWVARMIMLTMHFMKNEDGTPQVPFKTVYVHGLVR 565

Query: 297 LHKGEKISKSLGNVIDPIEVIEE------------------------------------- 319
             +G+K+SKS GNV+DPI++I+                                      
Sbjct: 566 DGQGQKMSKSKGNVLDPIDLIDGIDLESLVAKRTSNMMNPKDAAKIEKQTRKEFPEGIPA 625

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD----- 374
            G DALR+      + G+D  +D   ++     +  N I N  SR V M   D +     
Sbjct: 626 FGTDALRFTFTSLASTGRDINFDLKRVEG--YRNFCNKIWN-ASRFVLMNCVDKEGNALA 682

Query: 375 -GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
               P    +   ++ I+S  +  +  I+++ +   +      +   +     D Y +  
Sbjct: 683 IDKAPNTQVWELPEQWIISRLNSTIANIKQHFEQYRLDMVSHDIYEFIWNEYCDWYVELA 742

Query: 432 KPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           K      T + +R + + YV + V+          +P L  +I+  +    E R   S+
Sbjct: 743 KASLNDDTVSNERKAQIRYVLLHVLETAMRFAHPVMPYLTEQIWQTIAPLLERRDTDSI 801



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 22/168 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I+          H+GH +   I D L R+HR+ G + L+  GTD  G       + 
Sbjct: 48  ESFSIALPPPNVTGSLHMGHGFNNAIMDSLTRYHRMLGDNTLWQPGTDHAGIATQMVVER 107

Query: 65  AGV---------TTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
                       T + F+++                R +   +D S + F  T ++   +
Sbjct: 108 RLNAEGIKRTDLTREDFINKVWEWKEESGGNITRQIRRLGSSVDWSRERF--TMDEGLSN 165

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             + ++ ++ D+G IY+G     +  + +   +D EV    +      
Sbjct: 166 AVKEVFVRLHDEGLIYRGKRLVNWDPKFQTALSDLEVENHDEKGSLWH 213


>gi|251796200|ref|YP_003010931.1| leucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543826|gb|ACT00845.1| leucyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 811

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 75/199 (37%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    +
Sbjct: 33  SGKKKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +    +N  NFR     L  SY  D    TT+  ++   + ++ ++ +KG 
Sbjct: 93  YALQTGRHPREITVENINNFRRQIKSLGFSYDWDREFSTTDPDYYKWTQWIFIQLYNKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++ Y ++LL 
Sbjct: 153 AYVAEVPVNWCPALGTVLANEEVIDG----LSERGGHPVIRKPMRQWMLKITEYAERLLE 208

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 209 DLEELDWSESIKDMQRNWI 227



 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/428 (14%), Positives = 139/428 (32%), Gaps = 59/428 (13%)

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYYNA 152
           T +        +   ++   GD  K  Y+G     +  + N    +D +    +    + 
Sbjct: 348 TRDWEFAKQFDLPILEVVQGGDATKEAYAGDGPHANSDFLNGLNNEDAIKTMIEHLEGSG 407

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           + +         + F    Y  + +         + P+      +          S + +
Sbjct: 408 KGHGKVTYRLRDWLFSRQRYWGEPIPILHLEDGTMKPVPVDQLPLVLPDVDAIKPSGTGE 467

Query: 213 TFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDN------------PDGSKAKFW- 256
           +    +       DP+  M    +  T                           K K W 
Sbjct: 468 SPLANVTEWVNTIDPETGMKARRETNTMPQWAGSCWYYLRFIDPKNENEICSPEKQKEWL 527

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P DL++ G +    H +Y   +         +    P  K V     +    EK+SKS G
Sbjct: 528 PVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVDTKEPFHKLVNQGMILGTNNEKMSKSRG 587

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVI+P +++ E G D LR + +          ++ +G++         G    +SR   +
Sbjct: 588 NVINPDDIVNEFGADTLRMYEMFMGPLEATKPWNTNGVE---------GTYRFLSRVWRL 638

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            + +   +        E+ ++      R ++++ ++ +N   + A++Q++  V+E  +  
Sbjct: 639 FVGEDGSVNAKITNDGETTKAFKQTWHRSIKKVTDDFENLRFNTAISQLMIFVNEAYK-- 696

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCF 486
                                + VE ++    +L    P +  ++++ L          +
Sbjct: 697 ------------------TDVLPVEAMKNFLQMLSPLAPHITEELWEKLGGTGSITYEQW 738

Query: 487 QSLDQRLK 494
            S ++ L 
Sbjct: 739 PSYEEALT 746


>gi|150403520|ref|YP_001330814.1| valyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150034550|gb|ABR66663.1| valyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 886

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 138/396 (34%), Gaps = 23/396 (5%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
            + G  ++        + D+ + N  ++ K  +      + + V    +      +    
Sbjct: 336 QNVGSCWRCKTPIEIIVGDQWFVNVTKLLKEVENA--ANEISWVPEHMKARLLKWVEDMG 393

Query: 174 DKLLSYYESHPEFILPIERRNEV-----ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                  +      +P+    +             +     S  T   G         ++
Sbjct: 394 WDWCISRQRLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSKLVAETDVL 453

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANLPL 286
             W+D+    L   G+L++ +  K K +P  L   G DI+R  A Y    +  ++   P 
Sbjct: 454 DTWMDSSITPLVIAGWLEDEEFFK-KHYPVQLRPQGHDIIRTWAFYTIVRSLAITGEKPW 512

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            + V +       G K+SKS GNV++P E+ +  G DALR +       GKD  +    +
Sbjct: 513 DEIVINGMVFGEDGFKMSKSRGNVVEPGEITKTYGADALRLW-ASNSTIGKDVPFAWKEV 571

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSVCSRVLQEIRE 403
           +          I N    +   I  +    + T          D  ILS  + ++ ++ +
Sbjct: 572 E--YGGRFLRKIWNACKFAKMNISDEVISELKTINTIEIENPVDLWILSKLNDLISKVSK 629

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAST----VLYVTVEVIRQ 457
           ++ N  I+  + ++   +     D Y +  K     K   + A        Y   +VI +
Sbjct: 630 DLGNYKINTVV-EIQKFLWHEFCDNYIEMVKHRLYSKEESESAQKEKLMAQYTLYKVITE 688

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
              LL  F P  A  +  I  + + +  +   D+ L
Sbjct: 689 SVKLLTPFTPHFAEIVGQIYEIDNLHTSWPVADESL 724



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    I T   YP  + H+GH       D++ARF R++G DVLF  G D HG      
Sbjct: 31  EKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMNGYDVLFPQGWDCHGLPTEVK 90

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +     TK                D+N    R+    L IS  +D    T    +    
Sbjct: 91  VEELNNITKSDIDRHEFRRLCVELTDENVEKMRNQVKSLGISIDWDREYITMNPDYVRKS 150

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           +  + K+ +KG IY+G +   +  R E
Sbjct: 151 QTAFLKMYEKGLIYRGKHPVNWCPRCE 177


>gi|71066405|ref|YP_265132.1| valyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|90101547|sp|Q4FQL0|SYV_PSYA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71039390|gb|AAZ19698.1| valyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 984

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 130/408 (31%), Gaps = 93/408 (22%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + ++  +       ++  E      +P + +N +     +G++D  +SR+   W
Sbjct: 396 VEPWLTDQWYVAVKELAQPAIAAVEDGQIEFVPAQYKN-MYMAWMNGIQDWCISRQ-LWW 453

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I    D +  +YV                            W  +     +T  + D
Sbjct: 454 GHRIPAWYDEEGSIYVARDEAEVRSKYNLAADVKLRQDDDVLDTWFSSGLWTFSTLDWAD 513

Query: 247 NPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFI 296
                +    F P  + V G DI+ F         +           +P           
Sbjct: 514 VNADPRVMETFHPTSVLVTGFDIIFFWVARMIMMTMHFVKNEDGTPQIPFKTVYVHGLVR 573

Query: 297 LHKGEKISKSLGNVIDPIEVIEE------------------------------------- 319
              G+K+SKS GNV+DPI++I+                                      
Sbjct: 574 DGNGQKMSKSKGNVLDPIDIIDGIELEALVEKRTSNMMNPKDAAKIEKQTRKEFPEGIPA 633

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+      + G+D  +D   ++     +  N I N  SR V M   D +G    
Sbjct: 634 FGTDALRFTFTSLASTGRDINFDLKRVEG--YRNFCNKIWN-ASRFVLMNCVDKEGNAQA 690

Query: 380 PGAFTESD------ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
                 +D      + I+S  +  +  I ++     +      +   +     D Y +  
Sbjct: 691 IDQTANADVWELPEKWIMSRLNSTITNIHQHFDQYRLDMVSHDIYEFIWNEYCDWYVELA 750

Query: 432 KPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K   L   +   +R + + YV + V+          +P L  +I+  +
Sbjct: 751 KA-SLNDDSVSDERKAQIRYVLLHVLETALRFSHPIMPYLTEQIWQTI 797



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 22/170 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I+          H+GH +   I D L R+HR+DG + L+  GTD  G       
Sbjct: 54  KDESFSIALPPPNVTGSLHMGHGFNNAIMDALTRYHRMDGDNTLWQPGTDHAGIATQMVV 113

Query: 63  Q---------NAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +            ++ + F+D+                R +   +D S + F  T +   
Sbjct: 114 ERRLEAEGIKRRDMSREDFIDKVWEWKEESGGNITRQIRRLGSSVDWSRERF--TMDDGL 171

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
            +  + ++ ++ D G IY+G     +  + +   +D EV    +      
Sbjct: 172 SNAVKEVFVRLFDDGLIYRGKRLVNWDPKFQTALSDLEVENVDEKGSLWH 221


>gi|295092843|emb|CBK78950.1| leucyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 803

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLRGKYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N +N +   +       +D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAKSTAENVKNIKRQINEIAAIYDWDMEVNTTDPSFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G           PV       +  +++ Y ++LL+ 
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTPVTKKNLRQWMLKITDYAERLLND 203

Query: 180 YESHPEFILPIERRNEVI 197
            +         + ++E I
Sbjct: 204 LDKLDWPEKVKKMQSEWI 221



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 92/237 (38%), Gaps = 40/237 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            K+ P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 522 DKYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGVIDFDEPFKKLFNQGMITGKNGIKMS 581

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G++    +   N   NLV  
Sbjct: 582 KSKGNVVSPDDLVRDYGCDSLRLYELFVGPPELDAEWDDRGIEGV--SRFLNRFYNLV-- 637

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              M  KD D             + ++ +  +++ +I +  +   ++  ++  +      
Sbjct: 638 ---MSSKDKDIKET---------KEMVKLRHKLVYDIEQRFEQFSLNTVISGFMEYN--- 682

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++  +  K    K+   DR         E ++   +LL  F P L  +++  L   D
Sbjct: 683 NKLIELSK----KEGGIDR---------ETLKTFVVLLAPFAPHLGEELWRELGGTD 726


>gi|110596870|ref|ZP_01385160.1| isoleucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341557|gb|EAT60017.1| isoleucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 1085

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 111/287 (38%), Gaps = 11/287 (3%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G +    P+ +  VW D+ +       Y         + +PAD    G D     F+ ++
Sbjct: 539 GKRFNRTPELV-DVWFDSGSMPFAQLHYPFENREQFDRTFPADFIAEGVDQTRGWFYTLH 597

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A L+         + +   +   G+K+SKS GNV+DP E +   G DALR++L+    
Sbjct: 598 AIATLIFDKPAYRNLIVNGHILDKNGQKMSKSKGNVVDPFETMGRYGADALRWYLMVTSP 657

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
             +   ++ D +++         I +     +   +  +     +      +E D  +LS
Sbjct: 658 PWRPKSFNADEIEEEQRKFFRAFINSYNFFVLYANVDGFHFSESSIPLQERSELDRWVLS 717

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVL 448
             + ++  +   M+   +  A+  +   +     + Y     ++ W+     PD+ +   
Sbjct: 718 SLNTLVDNVHMRMEQYDLTGAVRLINDFIVDDLSNWYIRRSRKRFWK-SDMGPDKIAA-Y 775

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                 +  LA LL  F P +A++I+  L        F+S+     P
Sbjct: 776 QSLYTALLTLAKLLAPFTPFIADRIYLNLNSISGLEPFESVHLAAFP 822



 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 23/156 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ--------- 63
               N +P + H +   I DV+ R+  + G  V    G D HG  +  + +         
Sbjct: 50  PPTVNGKPGVHHVFSRTIKDVVCRYKTMQGYRVPRMAGWDTHGLPVEISVEKKLGLKNKS 109

Query: 64  ------------NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRIL 109
                        A       +D N   +  + + +   +  D    T    + ++    
Sbjct: 110 QVVEYGEGDFNAEARALVYHHIDDNREGWGKLTEQMGYWVDMDHPYITCTNNYIESVWWA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            K I DKG IYK         + E   +  E+  G 
Sbjct: 170 LKTIFDKGLIYKDYKIVPQDPKSETVLSSHELALGY 205


>gi|93006962|ref|YP_581399.1| valyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92394640|gb|ABE75915.1| valyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 984

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 127/430 (29%), Gaps = 92/430 (21%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E  + +D                 V+    + ++  +       +   E      +P + 
Sbjct: 371 EQGWLEDIEDYALKAPRAERGGTIVEPWLTDQWYVAVKELAKPAIDAVEDGSIEFVPAQY 430

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDP-------------------------- 224
           +N +     + L+D  +SR+   WG  I    D                           
Sbjct: 431 KN-MYMSWMTDLQDWCISRQ-LWWGHRIPAWYDDATGEIYVARDEAEVRSKYSLSDDIVL 488

Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDILRFHAIYWPAFL 279
                ++  W  +     +T  + D     +    F P  + V G DI+ F         
Sbjct: 489 RQDNDVLDTWFSSGLWTFSTLDWADVNADPRVMDTFHPTSVLVTGFDIIFFWVARMIMMT 548

Query: 280 LSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------ 319
           +           +P              G+K+SKS GNV+DPI++I+             
Sbjct: 549 MHFVKNEDGTPQVPFKTVYVHGLVRDGNGQKMSKSKGNVLDPIDLIDGIDLEALVEKRTS 608

Query: 320 -------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                                     G DALR+      + G+D  +D   ++     + 
Sbjct: 609 NMMNPKDAAKIEKQTRKEFPEGIPAFGTDALRFTFTSLASTGRDINFDLKRVEG--YRNF 666

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N I N     +   +       P      P  +   ++ I+S  +  + +I ++     
Sbjct: 667 CNKIWNASRFVLMNCVDSEGNAKPIDQAANPDVWELPEKWIMSRLNSTVADIHQHFAQYR 726

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAF 465
           +      +   +     D Y +  K   L   +   +R + + YV + V+          
Sbjct: 727 LDMVSQDIYEFIWNEYCDWYVELAKA-SLNDDSVSEERKAQIRYVLLHVLETALRFSHPI 785

Query: 466 VPKLANKIFD 475
           +P L  +I+ 
Sbjct: 786 MPYLTEQIWQ 795



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 27/188 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           + E   I+          H+GH +   I D L R+HR+DG + L+  GTD  G       
Sbjct: 53  KDESFSIALPPPNVTGSLHMGHGFNNAIMDALTRYHRMDGDNTLWQPGTDHAGIATQMVV 112

Query: 60  ------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +  +   +T + F+D+                R +   +D S + F  T +   
Sbjct: 113 ERRLEAQGIKRRDMTREDFIDKVWEWKEESGGNITSQIRRLGSSVDWSRERF--TMDDGL 170

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-----GQYYNAQHNPV 157
            +  + ++ ++ D G IY+G     +  + +   +D EV    +        Y+     +
Sbjct: 171 SNAVKEVFVRLFDDGLIYRGKRLVNWDPKFQTALSDLEVENVDEKGSLWHFRYHFTDKEL 230

Query: 158 QWMEEEGY 165
           Q  E + Y
Sbjct: 231 QTQEGKNY 238


>gi|329769394|ref|ZP_08260807.1| leucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838964|gb|EGF88555.1| leucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 809

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+    H+GH       D+L+R+ R +G +VL   G D  G    + 
Sbjct: 29  TKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN   FR     L  SY  D  + TT+ +++   + ++KK+ +KG  
Sbjct: 89  ALDTGNDPRDFTKQNIDTFRRQIKELGFSYDWDREVNTTDPKYYKWTQWIFKKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +        +++EV  G          +PV+      +  +++ Y ++LL+ 
Sbjct: 149 YVDEVPVNWCPALGTVLSNEEVIDGKS----ERGGHPVERRPMRQWVLKITDYAEQLLAD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDILDW 210



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 105/272 (38%), Gaps = 47/272 (17%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K+W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNDEVFADPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGE-----KISKSLGNVIDPIEVIEEVGVDALRYFL 329
                + +  P  K +F+ G IL +G+     K+SKS GNV++P ++I   G D LR + 
Sbjct: 549 YDLGLVPSREPFQK-LFNQGMILAEGKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVYE 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          + ++GL         +G    + R   + + D +          + +  
Sbjct: 608 MFMGPLDASIAWSENGL---------DGSRRFLDRVYRLFV-DEETGKVNDKVQDKDNAE 657

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +    +  ++++ E+++    + A++Q++  V++  +      P +              
Sbjct: 658 LEVSYNYTVKKVSEDIEILGFNTAISQLMVFVNDCYK--AEFIPRKYALG---------- 705

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                      LL  F P LA ++++I    +
Sbjct: 706 --------FIQLLAPFAPHLAEEMWEIYGNTE 729


>gi|315426678|dbj|BAJ48304.1| isoleucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 1062

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 21/292 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           +++  WID+   +  +            K +P D      D     F+ + + + LL+  
Sbjct: 517 FVLDTWIDSGVAFYASID-ALRNTELFKKLFPYDFITEAIDQTRGWFYTLLFTSTLLTGK 575

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    +     +   G+K+SKS GNVI   +     GVD LR +LV +        +  
Sbjct: 576 APFKSVLNQGHVLDEFGKKMSKSRGNVIWAEDAFNTYGVDPLRIYLVSKAEPWSTINFVP 635

Query: 344 DGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGA----FTESDESILSVCSRVL 398
             +  R  A+  N + N+ + +     L  +D  +    +        D+ ILS  + ++
Sbjct: 636 SEV--RETAEDLNILWNIFAFASTYQKLDKFDPRMHKLTSYLHLLRPEDKWILSRVNDLV 693

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRASTVLYVTVEV 454
            ++   ++   IHRAL +++S + E + R Y  + +   W   +T P++ +        V
Sbjct: 694 AKVTNYLEEMEIHRALREIMSFIVEDLSRTYLRSVRRLAWTEAET-PEKMAA-YACLHYV 751

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRC-----FQSLDQRLKPGFMLHK 501
           +R+  +LL  F P  A  ++ +     +        +  LD  L    ++ +
Sbjct: 752 LRKTLLLLAPFAPYTAEILYQLQKTETDKESIHLENWPQLDTELYSPKIIEQ 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E             N   HIGH    +  D++ R+  + G +V    G D  G      
Sbjct: 37  SEGPLFSFLEGPPTVNGYMHIGHTRGRVYKDIVLRYKTMRGYNVWRRGGWDCQGLPTEIE 96

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     T                    VD    ++R  ++ L   + YD    T    +
Sbjct: 97  VEKRLGITSKRDVEKIGLERFVEEANKVVDHYLSHWRRASERLGLWLDYDRAYETRRDEY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +    L KK  + GD+ +           E   +  E+ +G +
Sbjct: 157 MEHVWHLLKKAHEMGDLVESLRVVPTCPHCETALSQHEMAQGYE 200


>gi|315124572|ref|YP_004066576.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018294|gb|ADT66387.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 380

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +  +D+    +++V  G          + V   +  GY+ +++AY ++LL   E 
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEK 206

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229


>gi|327468643|gb|EGF14122.1| leucine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 861

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 233

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 234 DLEELDWPESIKDMQRNWI 252



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 104/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 515 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 574

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 575 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 634

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 635 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 686

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    +E+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 687 -KFLDRVYRLLN--------SKELVSENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 737

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 738 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 777

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 778 QTGESISYVAWPT 790


>gi|168027896|ref|XP_001766465.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682374|gb|EDQ68793.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 975

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/422 (17%), Positives = 142/422 (33%), Gaps = 58/422 (13%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +        ++ + Y N  ++ K A     + +   +    E+ +F  L   +
Sbjct: 368 MRLGICSRSNDVIEPMIKPQWYVNCKDMAKEACDVVRDGRLEIIPNQFEDTWFRWLENIR 427

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLK--DLSLSRKTFD-----------WGIKI 220
           D  +S        +       E  +  + G       ++R   +              K+
Sbjct: 428 DWCISRQLWWGHRVPAWYVTVEDDARTEMGAYPDHWVVARDEVEAESLAKAKFAGKTFKL 487

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             DP  ++  W  +     +  G+ +     KA F+P  +   G DIL F    +     
Sbjct: 488 EQDPD-VLDTWFSSGLFPFSVLGWPEATPDMKA-FYPTSVLETGHDILFFWVARMVMLGL 545

Query: 279 LLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            L+   P  K+VF H  +    G K+SKSLGNVIDP+EVI  V ++ L   L +     +
Sbjct: 546 KLTGVSPF-KQVFLHAMVRDAHGRKMSKSLGNVIDPLEVINGVTLEDLHKRLEQGNLDPR 604

Query: 338 DG-----------------------------------FYDKDGLKKRVNADLANGIGNLV 362
           +                                      + D L+        N + N++
Sbjct: 605 EVEKAKAGQKADFPNGIAECGADALRFALVAYTAQAVNINLDILRVVGYRQWCNKLWNVI 664

Query: 363 SRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--IS 419
             +++ +  D+       P +   S + ILSV ++ + +  + ++      A   +    
Sbjct: 665 RFAMTNLGSDFVPSATIQPSSLPLSCQWILSVLNKSIDKTVKALEGYQFSDATTALHSWW 724

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L    D + +  KP  +   +              +     LL  F+P L  +++  L  
Sbjct: 725 LYELCDVFIEVIKP-TMFGNDEAAKKATRDTLWLCLDTGLRLLHPFMPYLTEELWQRLPQ 783

Query: 480 AD 481
            +
Sbjct: 784 QE 785



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 18  AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK------- 70
              HIGH     + D++ R+ R+ G + L+  G D  G       + + +  +       
Sbjct: 46  GALHIGHGLTGAVEDLIIRWRRMSGYNTLWVPGVDHAGIATQVVVEKSIMKERKQTRHDL 105

Query: 71  ----------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
                      + DQ           L  S D      T ++         + ++  +G 
Sbjct: 106 GREKFVEEVYKWKDQYGGQICKQYRRLGASLDWSRECFTLDETRSKAVSEAFVRLHKEGL 165

Query: 119 IYKGCYSGWYSL 130
           IY+    G +  
Sbjct: 166 IYRDNRLGNWDC 177


>gi|307747993|gb|ADN91263.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 809

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|296136320|ref|YP_003643562.1| valyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295796442|gb|ADG31232.1| valyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 946

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 70/432 (16%), Positives = 136/432 (31%), Gaps = 100/432 (23%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA-------YQDKLLSYYESHPEFIL 188
           + +  V               V+ M  + +F   +           K +          +
Sbjct: 336 FLEKAVPHKNMVPVCARTGQIVEPMLTDQWFVATTKPGPDGKSIAQKAIDAVADGEVKFV 395

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--------------------------- 221
           P    N   +   + ++D  +SR+   WG +IP                           
Sbjct: 396 PENWVNT-YNQWMANIQDWCISRQ-LWWGHQIPAWYGENGEIFVARSEAEARDKASAAGY 453

Query: 222 -----DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                 DP  ++  W  +      T G+ +        F P+ + V G DI+ F    + 
Sbjct: 454 NRTLTRDPD-VLDTWYSSALVPFATLGWPEPTK-EMDLFLPSSVLVTGFDIIFFWVARMI 511

Query: 275 WPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE-------------- 319
                 +  +P  K V+ HG  L   G+K+SKS GNV+DP+++I+               
Sbjct: 512 MMTTHFTGKVPF-KHVYIHGLALDAHGKKMSKSEGNVLDPVDLIDGIELAPLLDKRTTGL 570

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+        G++  +D    +     +  N
Sbjct: 571 RKPETAPAVRKATEKEFPGGIPAYGADALRFTFASMATLGRNINFDTKRCEG--YRNFCN 628

Query: 357 GIGNLVSRSVSMI--LKDYDGMIPTPG---------AFTESDESILSVCSRVLQEIRENM 405
            + N     +  +  L+ +D  +   G          F+ +D  I S   R  Q++ +  
Sbjct: 629 KLWNATRFVLMQVDGLEAFDRGMDQCGGDCGPEGYMHFSAADRWIASQLQRTEQQVAQGF 688

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +  +  A   +   V +   D Y +  K  ++    P +        V  +  +  L  
Sbjct: 689 ADYRLDFAAQAIYQFVWDEYCDWYLEIAKT-QIAHGTPQQQRAARRTLVRTLETVLRLAH 747

Query: 464 AFVPKLANKIFD 475
             +P +  +++ 
Sbjct: 748 PIMPFITEELWQ 759



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 19/167 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    +           H+GHA+   + D L R+HR+ G + L+  G D  G       +
Sbjct: 35  KPSFCVQLPPPNVTGTLHMGHAFNQTVMDTLVRYHRMRGDNTLWVPGMDHAGIATQIVVE 94

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                   +  Q+          +   +S++    T + +    
Sbjct: 95  RQLQAAGLSRHDLGRAKFVEKVWEWKQQSGNTITSQMRRMGDSVSWEHEYFTMDDKLSKA 154

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYN 151
               + ++ ++G IY+G     +    ++  +D EV  +  DG  ++
Sbjct: 155 VVETFVQLYEQGLIYRGNRLVNWDPVLKSAVSDLEVESQEHDGFMWH 201


>gi|242052287|ref|XP_002455289.1| hypothetical protein SORBIDRAFT_03g007890 [Sorghum bicolor]
 gi|241927264|gb|EES00409.1| hypothetical protein SORBIDRAFT_03g007890 [Sorghum bicolor]
          Length = 958

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K YI     YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 101 TSKPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMKGFNVLHPMGWDAFGLPAEQ 160

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+  ++N   FR     L  SY  D  I TTE  ++   + ++ ++  +G 
Sbjct: 161 YAIETGTHPKITTERNIGRFRTQLKSLGFSYDWDREISTTEPAYYKWTQWIFLQLLKRGL 220

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G           PV       +  R+++Y D+LL 
Sbjct: 221 AYQAEVPVNWCPALGTVLANEEVVDG----VSERGGYPVIRKPMRQWMLRITSYADRLLE 276

Query: 179 YYESHPEFILPIERRNEVISFVK 201
                       E +   I   K
Sbjct: 277 DLNDLDWPESIKEMQRNWIGRSK 299



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 33/183 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 718 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 768

Query: 362 VSRSVSMILKDY--DGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
           + R+  + +     DG        TE + ++  L V  + +  + E +Q    + A++ +
Sbjct: 769 LGRTWRLTVGPQLPDGSYNDGTTTTEDEPTLDQLRVLHKCIARVTEEIQETRFNTAISAM 828

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+   ++    +P                    VI    +LL  F P LA +++  L
Sbjct: 829 MEFVNAAYKW--ETQP------------------KTVIESFVLLLSPFAPHLAEELWFRL 868

Query: 478 FVA 480
              
Sbjct: 869 GHP 871


>gi|86150411|ref|ZP_01068637.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596594|ref|ZP_01099831.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562705|ref|YP_002344484.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|14285781|sp|Q9PNK3|SYL_CAMJE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85839236|gb|EAQ56499.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191435|gb|EAQ95407.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360411|emb|CAL35208.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926320|gb|ADC28672.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929925|gb|EFV09083.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 809

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|300173528|ref|YP_003772694.1| leucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887907|emb|CBL91875.1| Leucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 803

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+ Q  H+GH       D+++RF R +G +VL   G D  G    +
Sbjct: 28  TSKPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRFKRANGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  QN  +FR+    L +SYD    I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAMKTGHNPADFTSQNVDHFREQIKSLGLSYDWNREINTTDPTYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +   D     ++EV  G          N V+      +  +++AY D+L+ 
Sbjct: 148 AYESNMMVNWDPIDRVVLANEEVIDGKS----ERSGNKVERKALRQWVLKITAYADRLVD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E++   I   K
Sbjct: 204 DLDDLDWPEAIKEQQRHWIGRSK 226



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 108/285 (37%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPHNAEKIADLDKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P +++   G D LR + +      ++  + +
Sbjct: 557 EPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVMAFGADTLRVYEMFMGPLTQNKPWSE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +G+               + R   +++ D   +      +   D  +  +  + ++++ E
Sbjct: 617 EGITGS---------RRWLDRVWRLLIDDEGQVREAVSTYNSGD--LDKIYHQTVKKVTE 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  ++E  +                 A  + Y+T         LL 
Sbjct: 666 DLENMHFNTAISQMMVFINEAYK---------------SEALPINYMT-----GFVQLLA 705

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              P LA +++  L   + +  + +  Q  +   ++  T + IF 
Sbjct: 706 PIAPHLAEELWVRLG-NEASISYVTWPQYDQA-QLVDDTVEIIFQ 748


>gi|229007086|ref|ZP_04164712.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754131|gb|EEM03550.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 802

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG 
Sbjct: 88  YALDTGNSPAEFTEKNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEIPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDDLDWPESLKDMQRNWIGRSE 226



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 147/427 (34%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  ++    + +    GDI K  Y+G     + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFAQVFSLPMKEVVKGGDITKEVYTGDGPHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +      S++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDASNQELEKAYHQTVKKVTEDYAELRFNTAISQMMMFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--R 484
                                  +  E +     ++    P +A +++  L  ++     
Sbjct: 690 --------------------TEVLPKEYVEGFVKMIAPVAPHVAEELWSKLGHSETISYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|213407826|ref|XP_002174684.1| cytoplasmic isoleucine-tRNA ligase Irs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212002731|gb|EEB08391.1| cytoplasmic isoleucine-tRNA ligase Irs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 1063

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 81/451 (17%), Positives = 153/451 (33%), Gaps = 36/451 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR---DMADVLDI--SYDDFIRTTEKRH 102
               D++G   A+    AG+  K       R+ +   ++     I  SY    R+     
Sbjct: 345 PCPVDDNGHFTAEVTDFAGMYVKDADKDVIRHLKGTGNLIKQSTIFHSYPFCWRSDTPLL 404

Query: 103 HDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + K+ +      D     +    ++RD+ + N  +  +  +         P+ 
Sbjct: 405 YRAVPSWFVKVKEITDKMVDNVMKTHWVPSNIRDKRFANWLKNARDWNISRNRYWGTPIP 464

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E Y           +    S  E       +N       S       S++    G 
Sbjct: 465 LWVSEDYE---------EVVCIGSIAELEELSGVKNITDLHRDSIDDITIPSKQ----GK 511

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            +      +   W ++ +    +  Y         + +PAD    G D     F+ +   
Sbjct: 512 GVLRRVSEVFDCWFESGSMPYASRHYPFENQKEFEQGFPADFISEGIDQTRGWFYTLTVL 571

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L    P    + S   +   G+K+SK L N  +P  +IE  G DALR +L+      
Sbjct: 572 GTHLFNTAPFKNVIVSGLVMAEDGKKMSKRLKNYPEPGLIIERYGSDALRLYLINSPVVR 631

Query: 337 KD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL------KDYDGMIPTPGAFTESDES 389
            +   + +DG+K+ V   L     +         L      KD+      P +    D  
Sbjct: 632 AEVLKFKEDGVKEVVARVLIPWWNSYKFFEAQASLYKKVTGKDFKFDENAPASANVMDRW 691

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVL 448
           I++ C  +++ +   M    ++  + Q++ L+ E  + Y        LK  + + A TV 
Sbjct: 692 IIARCQSLIEFVDHEMSVYRLYTVVPQLLGLIEEMTNWYI-RFNRRRLKGEDGE-AETVA 749

Query: 449 YVTV--EVIRQLAILLQAFVPKLANKIFDIL 477
            +T   EV+  L   +  F P +   I+  L
Sbjct: 750 ALTALFEVLYTLVRTMAPFTPFITENIYQHL 780



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R          +    PH GH     I D++ RF  L G  V    G D HG  +   
Sbjct: 30  KDRRPFTFYDGPPFATGLPHHGHLLASTIKDIVTRFACLKGYSVTRRFGWDTHGLPVEHE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V   +  +R   + L   I +D+  +T     
Sbjct: 90  IDKKLGITGRDDVMALGIDKYNAECRKIVMTYAGEWRQTIERLGRWIDFDNDYKTLYPTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++  K  +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKELFKKNKVYRGYRVMPYSTACTTPLSNFEAQQNYK 193


>gi|302666215|ref|XP_003024709.1| hypothetical protein TRV_01116 [Trichophyton verrucosum HKI 0517]
 gi|291188777|gb|EFE44098.1| hypothetical protein TRV_01116 [Trichophyton verrucosum HKI 0517]
          Length = 1421

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 78/525 (14%), Positives = 154/525 (29%), Gaps = 89/525 (16%)

Query: 35   ARFHRLDGLDVLFT------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
             R+ +  G+ V             +             +T     +   R   +  + + 
Sbjct: 714  KRYQKFIGMKVKHPFVDRLLPIFADEKVDPEFGTGAVKITPAHDFNDYIRGKENNLEFIS 773

Query: 89   ISYDD--FIRTTEK----RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
            I  DD  F          +  D    + +K+ +KG   K   +     +     + D + 
Sbjct: 774  IMNDDGTFNENAGPFAGVKRFDARYQVIEKLKEKGLYVKWENNPMKVPQCA--KSGDVIE 831

Query: 143  KGADGQYYNAQHNPV--------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                 Q++      V              +    E  ++R     +      +       
Sbjct: 832  PIMKPQWWMNMTELVKPAIKAVESGEIIIRPESAEKSYYRWMNNINDWCLSRQLWWGHQA 891

Query: 189  PIERRNEVISFVKSGLKDLSLSRKT------------FDWGIKIPDDPQYIMYVWIDALT 236
            P    +           +L ++ +T                  +  DP  ++  W  +  
Sbjct: 892  PAYFVDIEGEKGDDADGNLWVTGRTEEEAKAKAEKKFPGKKFVLKRDPD-VLDTWFSSGQ 950

Query: 237  NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
               +T G+           +P  +   G DIL F    +      ++  +P  K+V+ H 
Sbjct: 951  WPYSTLGWPKKTH-DLENLYPVSILETGWDILFFWVARMIMLGIKMTGQVPF-KEVYCHS 1008

Query: 295  FILH-KGEKISKSLGNVIDPIEVI------------------------------------ 317
             I   +G K+SKSLGNV+DPI+V+                                    
Sbjct: 1009 LIRDSEGRKMSKSLGNVVDPIDVMNGISLQKLHDKLLEGNLAEKEVAIATKFQKKAFPKG 1068

Query: 318  -EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
              E G DALR+ L+     G D  +D   +         N I       +  +  D+   
Sbjct: 1069 IPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKFVLGKLGDDFQPQ 1126

Query: 377  --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
                  G  + S+  IL   ++  +   E ++N+    A   +         D + +  K
Sbjct: 1127 ATPTKTGKESLSERWILHKFNQAAKVTNEALENREFSVAANTIYQYWYSQLCDVFIENSK 1186

Query: 433  PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  T+P    +        +     L+   +P +  +++  L
Sbjct: 1187 SLLQPDTDPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 1231



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K +E  Y    I  PN     H+GHA    + D + R+ R+ G  VL+  G D  G    
Sbjct: 492 KVKEAGYFVIPIPPPNVTGALHMGHALTKALQDTMIRWQRMKGKTVLYLPGYDHAGISTQ 551

Query: 60  KAAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +     T                   +  +   +       L  S+D      T ++
Sbjct: 552 SVVEKILWKTEKKSRHDIGREAMVGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDE 611

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+G     + 
Sbjct: 612 NLSAAVTETFVRLHEEGTIYRGNRLVNWC 640


>gi|283956488|ref|ZP_06373968.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792208|gb|EFC30997.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 809

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDERTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|269866172|ref|XP_002652181.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063007|gb|EED41875.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 320

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 26/258 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++  +       +  
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIF--LKTIDHFDEKE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWMEEEGYF--FRLSAYQDKLLS 178
            +  +  + + +  D  +          + +      ++ E+      FR S  +     
Sbjct: 128 INQMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQELTNFRCSICKTTPQI 187

Query: 179 YYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRK-TFDWGIKIPD 222
                  F L   +                    +++K  L    ++RK    WG+ +P 
Sbjct: 188 KTTKQLFFNLNELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPL 247

Query: 223 DP--QYIMYVWIDALTNY 238
                 + YVW DA   Y
Sbjct: 248 KEYDDKVFYVWYDAPIGY 265


>gi|170695887|ref|ZP_02887027.1| valyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139185|gb|EDT07373.1| valyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 959

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 120/363 (33%), Gaps = 59/363 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           Y+  L   QD  +S        I      N  I   K+       + +    G  +  D 
Sbjct: 412 YYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVAKTEEGAREKAAEAGYTG-PLKRDE 470

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +       + 
Sbjct: 471 D-VLDTWFSSALVPFSSLGWPNETQELK-HFLPSSVLVTGFDIIFFWVARMVMMTTHFTG 528

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-------------------------- 316
            +P             +G+K+SKS GN +DPI++                          
Sbjct: 529 KVPFDTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQAASI 588

Query: 317 -----------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                      I   G DALR+ +      G++  +D    +     +  N + N  +R 
Sbjct: 589 EKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRF 645

Query: 366 VSMILKDYDGMIPTPG-----------AFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           V M  + +D     P             F+ +D  I+S+  RV  E+ +   +       
Sbjct: 646 VLMNCEGHDCGFGKPAQCGECGPDGHLNFSSADRWIVSLLQRVEAEVAKGFADYRFDNVA 705

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   V +   D Y +  K  +++   P++        + V+  +  L    +P +   
Sbjct: 706 NALYKFVWDEYCDWYLELAKV-QIQTGQPNQQRATRRTLLRVLETVLRLAHPVIPFITEA 764

Query: 473 IFD 475
           ++ 
Sbjct: 765 LWQ 767



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 42  NRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVV 101

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  ++     +    L   I +     T + +   
Sbjct: 102 ERQLDAKGVSRHDLGREKFVERVWEWKQESGSTITNQVRRLGASIDWSREYFTMDDKMST 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 162 AVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIQYPL 214


>gi|157415352|ref|YP_001482608.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047144|sp|A8FME4|SYL_CAMJ8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157386316|gb|ABV52631.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315932229|gb|EFV11172.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 809

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|88798081|ref|ZP_01113668.1| valyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779278|gb|EAR10466.1| valyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 961

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 131/414 (31%), Gaps = 96/414 (23%)

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           H+ ++    + ++   +      +   +      +P    NE      + ++D  +SR+ 
Sbjct: 368 HDIIEPWLTDQWYVASTKMAQPAIDAVKDGQIEFVPKMYENEYY-HWMNNIQDWCISRQ- 425

Query: 214 FDWG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTG 243
             WG  I    D    +YV                            W  +     +T G
Sbjct: 426 LWWGHQIPAWYDNDGNVYVARDEAEVRSKYSLADDVELTRDEDVLDTWFSSALWTFSTLG 485

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGF 295
           +  + +       P D+ V G DI+ F         +           +P  K   +   
Sbjct: 486 WPHDMETVMRFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDDDGKPMIPFKKIYMTGLI 544

Query: 296 ILHKGEKISKSLGNVIDPI-------------------------------------EVIE 318
               G+K+SKS GNVIDPI                                     E   
Sbjct: 545 RDENGQKMSKSKGNVIDPIDLIDGIDIDELVKKRTSGMMQPQLAAKIEKNTRKSFPEGFA 604

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN---LVSRSVSMILKDYDG 375
           E G DALR+ L    +  +D  +D   L+     +  N + N   LV  +    ++D D 
Sbjct: 605 ESGTDALRFTLTSLASLSRDINFDVKRLEG--YRNFCNKLWNAARLVQMNTFESIEDSDE 662

Query: 376 MIPTPG--------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VD 425
           +              ++ +D  I S    ++ ++ ++ Q          + S + +    
Sbjct: 663 LGAPLDCGQHGGDVEYSLADRWIRSRLQTLIADVHKHYQQYRFDLMSQTLYSFIWDEYCS 722

Query: 426 RYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y +  KP  W    T   +        V V+ QL  L+   +P +  +I+  L
Sbjct: 723 WYLELSKPVFWNEHSTE-AQLRGTRQTVVHVLDQLLRLIHPIMPFITEEIWQSL 775



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 24/168 (14%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA++  I D L R+HR+ G D L+  GTD  G       +      
Sbjct: 36  MIPPPNVTGTLHMGHAFQQTIMDALTRYHRMMGHDTLWQPGTDHAGIATQMVVERLLGAE 95

Query: 70  ----------------KVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                             +  Q     S+  R + D +D + + F  T ++   +  R +
Sbjct: 96  GKTRHDLGRETFIDRVWEWKGQSGGTISQQMRRLGDSVDWTRERF--TMDEGLSEAVREV 153

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + ++ D+  +Y+G     +  +     +D EV    +         P+
Sbjct: 154 FVRLYDEELLYRGKRLVNWDPKFHTAISDIEVENKEEQGSLWHFRYPL 201


>gi|297529000|ref|YP_003670275.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252252|gb|ADI25698.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 805

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  +++AY D+LL  
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVING----RSERGGHPVIRKPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 205 LEELDWPESIKEMQRNWIGRSE 226



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/415 (14%), Positives = 137/415 (33%), Gaps = 61/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     + +    G+I K  Y+G     +  + N     +  D      + 
Sbjct: 341 HDERDYEFAKKFHLPMKEVVAGGNIEKEAYTGDGEHINSEFLNGLNKQEAIDKMIAWLEE 400

Query: 155 N----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +             + F    Y  + +         + P+      +   K+     S +
Sbjct: 401 HGKGRKKVSYRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVPEEELPLVLPKTDEIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKF 255
            ++    I+   +                M  W  +   YL      ++       K K 
Sbjct: 461 GESPLANIEEWVNVVDPKTGKKGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLKK 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P ++IE  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + +   + P       +++++  +  + ++++ E+ +    + A++Q++  ++E  +
Sbjct: 632 RLFVTENGELNPNIVD-EPANDTLERIYHQTVKKVTEDYEALRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +K                    E +     LL    P +  +++  L   D
Sbjct: 691 AEQMKK--------------------EYMEGFVKLLSPVCPHIGEELWQKLGHTD 725


>gi|194246730|ref|YP_002004369.1| Valyl-tRNA synthetase (ValRS) [Candidatus Phytoplasma mali]
 gi|193807087|emb|CAP18525.1| Valyl-tRNA synthetase (ValRS) [Candidatus Phytoplasma mali]
          Length = 863

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 123/349 (35%), Gaps = 39/349 (11%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      +F + +     +L+  + +        R  +        L+D  +SR+   
Sbjct: 356 PIEQRLSLQWFLKTNELAKNVLNKNKINFY----PARYKKTFMRWLENLQDWCISRQ-LW 410

Query: 216 WGIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           WG  I                         ++  W  +     +  G+ +  + +    +
Sbjct: 411 WGHSIPAWQKGSKIKVQIESPGKEWKADPDVLDTWFSSSLWPFSVLGWPNKDNFNFKHRF 470

Query: 257 PADLHVIGKDILRFHAIYW--PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+ V G DIL F        +  L+   P    +        KG K+SKS  N IDP 
Sbjct: 471 PTDVLVTGYDILTFWVSRMCLQSLHLTHKDPFKDVLLHGLIRDSKGNKMSKSKDNGIDPN 530

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            VIE+ G D LR+FL    + G D  YD+  +    N    N I N +SR   +    + 
Sbjct: 531 LVIEKYGTDVLRWFLTTNSSPGMDFNYDEIKIDASWN--FLNKIWN-ISRFFKLKFNIF- 586

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
                       +++IL+   ++L ++    +    H     +   + E   +   +  K
Sbjct: 587 TEDFDENKLLFPEKAILTQFKQLLTKVDILFEKYEFHEVGKLIYKFLWEDFANWGLEFLK 646

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +  + +      + +   +  LL  F+P L + I+  +   D
Sbjct: 647 -------DHIQTTNTQKFLIYIFNNILKLLNPFIPFLTDFIYAEINKTD 688



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 57/159 (35%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + H+GHA   ++ DV+ R  ++ G +VLF  G D  G       
Sbjct: 38  NKKPFTIILPPPNVTGKLHLGHALNNVLQDVIIRRKKMLGFEVLFLPGMDHAGIATQIKV 97

Query: 63  QNAGVTT----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +    +                   +  + +   R   ++L   + YD+   T +     
Sbjct: 98  KKRLKSEGLFNKELSKETFLKYAWQWKAEYANKIRRQWEILGLHLDYDNEKFTLDSDLSS 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           T +  + K+  +  IY+      +  + +   ++ EVY 
Sbjct: 158 TVKYAFIKLYHQNLIYRSDRIINWDPQTQTALSNVEVYY 196


>gi|167587404|ref|ZP_02379792.1| valyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 955

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 122/368 (33%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   +S     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARSEEDARAQAAAKGYAGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETPELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------- 319
            +  +P             +G+K+SKS GN +DPI++++                     
Sbjct: 520 FTGKVPFHTVYVHGLVRDSEGQKMSKSKGNTLDPIDIVDGIDLESLVAKRTTGLMNPKQA 579

Query: 320 -----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIAAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPGA-------------FTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D  +  P A             F+ +D  I+S+  R   +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGLDKPEACGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNVANSIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  GRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIVV 95

Query: 60  ------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +      +  + FV++                R +    D S + F  T + + 
Sbjct: 96  ERQLDAQGVSRHDLGREQFVERVWEWKQQSGSTITGQVRRLGASTDWSREYF--TMDDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SAAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|269123133|ref|YP_003305710.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314459|gb|ACZ00833.1| leucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 865

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 6/206 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K +E  Y     AYP+ + H GH     I D +AR+ ++ G +VL T G D  G     
Sbjct: 30  VKGKENYYTLEMFAYPSGKLHAGHLRNYTIGDAIARYKKMKGFNVLHTFGWDSFGLPAEN 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           AA + G +  ++  QN  N +    ++ +SY  D  + T +K ++   +  + ++  KG 
Sbjct: 90  AAIDNGASPAIWTAQNIGNMKRQLKLMGLSYDWDRELATYKKEYYKFNQKFFIEMYKKGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +YK      +         +++V    DG+ +      V   E   ++F+++ Y ++LL+
Sbjct: 150 VYKRKSYVNWCPDCNTVLANEQV---EDGKCWRHGKTSVIQKELSQWYFKITDYAEELLT 206

Query: 179 YYES-HPEFILPIERRNEVISFVKSG 203
            +E     +   +    +      SG
Sbjct: 207 GHEELKGYWPEQVLAMQKNWIGKSSG 232



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 88/188 (46%), Gaps = 11/188 (5%)

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            + +   ++ K EK+SKS  N +DP ++I+E G DA R F +      K+  ++ +G+  
Sbjct: 602 NIKTGEELVSKLEKMSKSKNNGVDPEKIIQEFGADAARIFTLFAAPPEKELEWNANGVVG 661

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-N 407
                  N I  +V   + ++++DY          ++ DE++     + ++ + ++M+ N
Sbjct: 662 AYR--FINRIYLMVQECLDILIEDY--SEIDLSKRSKEDENLQRKTHQTIKRVTDSMEDN 717

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A+A  + L++E+  Y         K +  ++      V  E +  L +++  F P
Sbjct: 718 FHFNTAIAGSMELINELTTYKQNVLDVNNKSSESNK------VFKESMISLILMMSPFAP 771

Query: 468 KLANKIFD 475
            LA +I+ 
Sbjct: 772 HLAEEIWQ 779


>gi|149927918|ref|ZP_01916168.1| valyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823357|gb|EDM82590.1| valyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 949

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 124/375 (33%), Gaps = 60/375 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P QW+     +      QD  +S        I      N  +   ++     S +  T  
Sbjct: 399 PEQWVNTYNQWLNN--IQDWCISRQLWWGHQIPAWYGENGEVFVARTEADARSKAAATGH 456

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
            G    DD   ++  W  +     +T G+ D     K  F P+ + V G DI+ F    +
Sbjct: 457 TGELKRDDD--VLDTWFSSALVPFSTLGWPDETPELK-HFLPSSVLVTGFDIIFFWVARM 513

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P             +G+K+SKS+GN +DP+++I+               
Sbjct: 514 IMMTTHFTGQVPFHTVYVHGLVRDAEGKKMSKSVGNTLDPVDLIDGCSLDTLLVKRTTGL 573

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+        G++  +D+         +  N
Sbjct: 574 SKPQDAPKIEKKTRKEFPEGIPAYGADALRFTFASLATLGRNINFDQKRCDG--YRNFCN 631

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA----------FTESDESILSVCSRVLQEIRENMQ 406
            + N  +R V M  +  D  +    A          F+++D  I S   RV  ++ +  +
Sbjct: 632 KLWN-ATRFVLMNTEGQDCGLSDHDADACTPGGYLDFSQADRWITSTLQRVEADVAQGFE 690

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
                     +   V +   D Y +  K  ++    P +        V V+  +  L   
Sbjct: 691 TYRFDLIAQSIYQFVWDEYCDWYLEIAKV-QIANGTPAQQRATRRTLVRVLETILRLAHP 749

Query: 465 FVPKLANKIFDILFV 479
            +P +  +++  + V
Sbjct: 750 IIPFITEELWQTVSV 764



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 74/224 (33%), Gaps = 22/224 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   I D L R++R+ G + L+  GTD  G      
Sbjct: 32  EGKPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMRGHNTLWQPGTDHAGIATQIV 91

Query: 62  AQ--------------NAGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKR 101
            +                    K++  +N      +   R M   +D   + F  T +  
Sbjct: 92  VERQLAAKNITRHDLGREKFVEKIWEWKNESGSKITEQMRRMGASVDWQREYF--TMDPA 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              +   ++ ++ ++G IY+G     +    +   +D EV       +      P+   +
Sbjct: 150 LSKSVTEVFVRLFEQGLIYRGKRLVNWDPVLKTAVSDLEVESVETEGHLWELKYPLVEAD 209

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                  L+    +  +        + P + R + +   K  L 
Sbjct: 210 PVKGLTHLTVATTRPETMLGDSAVMVHPDDERYQHLIGKKVKLP 253


>gi|261418142|ref|YP_003251824.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767898|ref|YP_004133399.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374599|gb|ACX77342.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112764|gb|ADU95256.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 805

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  +++AY D+LL  
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVING----RSERGGHPVIRKPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 205 LEELDWPESIKEMQRNWIGRSE 226



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/415 (14%), Positives = 137/415 (33%), Gaps = 61/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     + +    G+I K  Y+G     +  + N     +  D      + 
Sbjct: 341 HDERDYEFAKKFHLPMKEVVAGGNIEKEAYTGDGEHINSEFLNGLNKQEAIDKMIAWLEE 400

Query: 155 N----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +             + F    Y  + +         + P+      +   K+     S +
Sbjct: 401 HGKGRKKVSYRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVPEEELPLVLPKTDEIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKF 255
            ++    I+   +                M  W  +   YL      ++       K K 
Sbjct: 461 GESPLANIEEWVNVVDPKTGKKGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLKK 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P ++IE  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + +   + P       +++++  V  + ++++ E+ +    + A++Q++  ++E  +
Sbjct: 632 RLFVTENGELNPNIVD-EPANDTLERVYHQTVKKVTEDYEALRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +K                    E +     LL    P +  +++  L   D
Sbjct: 691 AEQMKK--------------------EYMEGFVKLLSPVCPHIGEELWQKLGHTD 725


>gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81481385|sp|Q8R9L3|SYI_THETN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 932

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 64/310 (20%), Positives = 116/310 (37%), Gaps = 27/310 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 KCECGSTKFRKETDIMDVWFDSGSSHAAVLETHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    A       P    +     +  +G K+SKSLGNV+DP EVI+E G D LR ++V
Sbjct: 569 QSSLLTAVATRGKAPYKNVLTHGFVVDGEGRKMSKSLGNVVDPAEVIQEYGADVLRLWVV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D     + LK+   A++   I N     +  +   D D  +       E D+ 
Sbjct: 629 SADY-TADMRTSPEILKQI--AEVYRKIRNTARFLLGNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL---KKTNPDRA 444
            L   +R+++++ E+      +     V +   V     Y D  K        K+   +A
Sbjct: 686 ALYRLNRLVKQLTESFDKYEFYDFFHPVHNFCVVDMSSLYLDILKDRLYTYPAKSKERKA 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------ 498
           +        ++  L  L+   +   + +I+  +   D N  F+S+     P         
Sbjct: 746 AQT--TLYIILDTLVKLMAPVLAFTSEEIWWHMK-HDRNNNFESVQLADWPQVKEEYDNP 802

Query: 499 -LHKTFDPIF 507
            + + ++ +F
Sbjct: 803 YIIEKWEKLF 812



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIVVKYKTMRGYDSPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                  +   +         K F        R     L +  D      T +  +    
Sbjct: 105 VIKILGVKRHEMNPVEFRKVCKDFAFSQIERQRQQFKRLGVRGDWEKPYLTLDPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ +G IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKRGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|319953837|ref|YP_004165104.1| valyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422497|gb|ADV49606.1| Valyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 876

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 129/412 (31%), Gaps = 27/412 (6%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                ++  G   +        L D+ +   +E+ + A           +   + E  + 
Sbjct: 332 KTETHLNKVGTSERTKAVIEPRLSDQWFLKMEELAEPAIKAVLETGDVKLFPKKFENTYR 391

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFV------KSGLKDLSLSRKTFDWGIKIP 221
                        +      +P     E              L+   +        I   
Sbjct: 392 HWMENIRDWNISRQLWWGQQIPAYYYGEGAEDFVVAESKDEALEKAIVKTGNSTLKISDL 451

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAF 278
              +  +  W  +    ++    +  P+  +   ++P +  V G DIL F    +    +
Sbjct: 452 KQDEDALDTWFSSWLWPISVFNGILEPENKEIEYYYPTNDLVTGPDILFFWVARMIISGY 511

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P      +      +  K+SKSLGN  D + +IEE G D +R  L+   A G D
Sbjct: 512 EYRDKPPFENVYLTGLVRDKQRRKMSKSLGNSPDALGLIEEYGADGVRVGLLLSAAAGND 571

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D+   ++  N   AN I N         + D     P P A     E   +  ++ L
Sbjct: 572 LMFDESLCQQGKN--FANKIWNGFRLVQGWEVADL----PQPEASKLGLEWYNAKFNQTL 625

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEV 454
            EI ++     I  AL  +  LV       D    W L+   P        T     + +
Sbjct: 626 LEIEDHFSKYRISDALMAIYKLVW------DDYSSWLLEIVKPAYQQPIDKTTFDAVLAI 679

Query: 455 IRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
                 LL  F+P L  +I+  +     +E        +  K   +L   FD
Sbjct: 680 FENNLKLLHPFMPFLTEEIWQHIAERTPEEALVIAKWPEANKVDEVLISGFD 731



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLMGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + D+      +    L  S  +D    T +     
Sbjct: 92  VAKLKEQGIDKADLTREEFLKHAWDWTDEYGGVILEQLKKLGCSCDWDRTKFTLDDNMSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLFEKGLIYRGFRMVNWDPEAQTTLSDEEVIH 190


>gi|319763501|ref|YP_004127438.1| valyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317118062|gb|ADV00551.1| valyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 962

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 115/356 (32%), Gaps = 59/356 (16%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS---RKTFDWGIKIPDDPQYIMYV 230
           ++ ++  +                 + + G   ++ S    +    G  +  D   ++  
Sbjct: 424 NQWMNNIQDWCISRQLWWGHQIPAWYDEDGNVYVARSEAEAQAQAPGRPLRRDED-VLDT 482

Query: 231 WIDALTNYLTTTGYLDNP---DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           W  +     +T G+ D           + P+ + V G DI+ F    +       +  +P
Sbjct: 483 WYSSALVPFSTMGWPDQGESATDDYNLYLPSSVLVTGYDIIFFWVARMIMMTTHFTGRVP 542

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------------- 319
                     +   G+K+SKS GNV+DP+++I+                           
Sbjct: 543 FRHVYIHGLVLDAHGKKMSKSEGNVLDPVDLIDGIALEPLLDKRTQGLRRPETAPTVRKN 602

Query: 320 -----------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
                       G DALR       + G+   +D    +     +  N + N  SR V M
Sbjct: 603 TQKEFPDGIPAYGADALRLTFAALASLGRSINFDSKRCEG--YRNFCNKLWN-ASRFVLM 659

Query: 369 ILKDYDG-------MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             + +D           +   F+++D  I+S   +V  E+ +      +     Q+   V
Sbjct: 660 NCEGFDCGLDATQGCTESYLDFSQADRWIVSRLQKVEAEVAKGFTEYRLDNVANQIYDFV 719

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                D Y +  K  +++     R        + V+  +  L    +P +   ++ 
Sbjct: 720 WNAFCDWYLEIAKV-QIQTGTEARQRATRRTLIRVLEAILRLAHPIIPFVTEALWQ 774



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA+   I D L R+HR+ G + ++  GTD  G       + 
Sbjct: 57  PAFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAGIATQIVVER 116

Query: 65  AGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              KV+  +       +   R + D +D S + F  T + +   
Sbjct: 117 QLQEQGASRHDLGRPGFVEKVWEWKEKSGNTITTQMRRLGDTVDWSREYF--TMDDKLSR 174

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + K+ ++G IY+G     +    ++  +D EV              P+
Sbjct: 175 VVTETFVKLYEQGLIYRGKRLVNWDPVLQSAVSDLEVENEEKDGSLWHIAYPL 227


>gi|323526769|ref|YP_004228922.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383771|gb|ADX55862.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 966

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 120/366 (32%), Gaps = 59/366 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   K+       + +    G  + 
Sbjct: 416 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVAKTEEGAREKAAEAGYTG-PLK 474

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +      
Sbjct: 475 RDED-VLDTWFSSALVPFSSLGWPNETQELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 532

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 533 FTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 592

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 593 ASIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 649

Query: 363 SRSVSMILKDYDGMIPTPGA-----------FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +R V M  + +D     P             F+ +D  I+S+  RV  E+ +   +    
Sbjct: 650 TRFVLMNCEGHDCGFGQPAQCGECGPDGHLHFSSADRWIVSLLQRVEAEVAKGFADYRFD 709

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
                +   V +   D Y +  K  +++   P++        + V+  +  L    +P +
Sbjct: 710 NVANALYKFVWDEYCDWYLELAKV-QIQTGQPNQQRATRRTLLRVLETVLRLAHPVIPFI 768

Query: 470 ANKIFD 475
              ++ 
Sbjct: 769 TEALWQ 774



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 46  SKKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVV 105

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  ++     +    L   I +     T + +   
Sbjct: 106 ERQLDAKGVSRHDLGREKFVERVWEWKQESGSTITNQVRRLGASIDWSREYFTMDDKMSA 165

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 166 AVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIQYPL 218


>gi|325955042|ref|YP_004238702.1| isoleucyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437660|gb|ADX68124.1| Isoleucyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 1135

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 96/269 (35%), Gaps = 10/269 (3%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y             +PAD    G D     F+ ++
Sbjct: 594 KPMKREADLIDVWFDSGAMPYAQVHYPFENKELIDNHTMYPADFIAEGVDQTRGWFYTLH 653

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A L+  +      + +   +   G+K+SK LGN IDP + +E  G DA R++++    
Sbjct: 654 AIATLVFDSKAYKNVMSNGLVLDKNGQKMSKRLGNAIDPFDTLETYGPDATRWYMIANAQ 713

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
             ++  +D  G+ + V       + N  S        D   Y           E D+ IL
Sbjct: 714 PWENLKFDLAGVDE-VRRKFFGTLYNTYSFFALYANVDGFTYAEKEIPVEERDELDQWIL 772

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLY 449
           S  + ++Q++ E   +    +A   +   V  +  + +    +    K            
Sbjct: 773 SELNTLIQQVDEFFSDYEPTKAARAIQEFVIDNLSNWHVRLSRRRFWKGDYSKDKIAAYQ 832

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF 478
               V+  +AIL     P   ++++  L 
Sbjct: 833 TLYTVLETVAILSSPIAPFFMDRLYKDLN 861



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 19/148 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++           N +P I H     I D+  RF  L G  V+   G D HG  +    
Sbjct: 39  GKDSYVFYEGPPSANGKPGIHHVLARSIKDIFCRFQTLKGKQVIRKAGWDTHGLPVELGT 98

Query: 63  QNAGVTTKV-----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +     TK                   V + +  + ++ + +   +  DD   T + ++ 
Sbjct: 99  EKELGITKEDIGTKITIEQYNEACKRTVMRYTDLWNNLTEKMGYWVDMDDPYITYKPKYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
           +T   L K+I DKG +YKG     YS +
Sbjct: 159 ETVWWLLKQIYDKGYLYKGYTIQPYSPK 186


>gi|285019435|ref|YP_003377146.1| valyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474653|emb|CBA17152.1| probable valyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 1004

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/436 (16%), Positives = 131/436 (30%), Gaps = 111/436 (25%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F R+ A   + L   ES     +P    N         ++D  +SR+   W
Sbjct: 406 IEPYLTDQWFVRMDALAKRGLELVESGQIQFVPPNWINT-YRHWMENIQDWCISRQ-LWW 463

Query: 217 G--IKIPDDPQYIMYV-------------------------------WIDALTNYLTTTG 243
           G  I    D     YV                               W  +     +T G
Sbjct: 464 GHRIPAWFDDAGNCYVARNEEEARTQAAAKHGGQAPALRQDHDVLETWFSSQLWPFSTMG 523

Query: 244 YLDNPDGS---KAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           + D    +     ++ P+ + V G DI+ F    +       +  +P      +      
Sbjct: 524 WPDTQAMAERGFDRYLPSSVLVTGFDIIFFWVARMIMATDSFTGRVPFRDVYITGLIRDK 583

Query: 299 KGEKISKSLGNVIDPIEVIEE-------------------------------------VG 321
            G+K+SKS GNV+DP+++I+                                       G
Sbjct: 584 DGQKMSKSKGNVLDPLDIIDGIHIDDLVAKRTTGLMQPRMAEKIEKATRKEFPTGIIAHG 643

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-- 379
            DALR+ +    + G+D  +D    +   N    N + N  SR V M  +  D    T  
Sbjct: 644 ADALRFTIAALASHGRDIKFDLGRAEGYKN--FCNKLWN-ASRFVLMNTRAEDVEATTAT 700

Query: 380 ----------------------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
                                     T++++ IL        E + +            +
Sbjct: 701 NASPHAQMDNATDTALHQGLEKHAPVTDAEKWILLRLQATTAEAQTHFATYRFDLLAQCL 760

Query: 418 ISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    D + +  KP  L   +   A +  +  + V+  L  LL    P +  +++ 
Sbjct: 761 YEFAWNAFCDWFLELAKP-ALGGDDVAAAESTRHTLLHVLETLLRLLHPLTPFVTEELWL 819

Query: 476 I----LFVADENRCFQ 487
                L +A      Q
Sbjct: 820 QVAPRLGIAAPTISLQ 835



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 24/138 (17%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              +           H+GHA++  + D L R+HR+ G D L+  G+D  G          
Sbjct: 35  TYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGFDTLWQVGSDHAGIATEMVVSRN 94

Query: 66  GV------------------TTKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
            +                      +  Q      R  R +    D S   F  T + +  
Sbjct: 95  LMLEGKGETRDSLGRDGFIAKVWEWKQQSGDTIERQMRRLGTSADWSRSTF--TMDPQPS 152

Query: 104 DTCRILWKKISDKGDIYK 121
                 + +  ++G IY+
Sbjct: 153 AAVIEAFVRWHEQGLIYR 170


>gi|297544853|ref|YP_003677155.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842628|gb|ADH61144.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 932

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 114/310 (36%), Gaps = 27/310 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T + G         IM VW D+ +++                 WPA+L++ G D     F
Sbjct: 515 TCECGSIRFRKETDIMDVWFDSGSSHAAVLQTHP------DLKWPAELYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN +DP +VI+E G D LR + V
Sbjct: 569 QSSLLTSVATRGKAPYKNVLTHGFVVDGEGRKMSKSLGNGVDPADVIKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    K+ LK+    +    I N     +S +   D D  +       E D+ 
Sbjct: 629 SAD-FTSDMRISKEILKQ--MTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYEELLEIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL---KKTNPDRA 444
            L   +RV++E+ E       +  L  V +   V     Y D  K         +   RA
Sbjct: 686 ALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYPAASKERRA 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM------ 498
           +        ++  L  L+   +   + +I+  +    +N  F+S+     P         
Sbjct: 746 AQT--TLYIILDTLVRLIAPVLTFTSEEIWSYMKHDSQN-NFESVQLADWPEVQEKYNNP 802

Query: 499 -LHKTFDPIF 507
            + + ++ +F
Sbjct: 803 YIIEKWEKLF 812



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   HIG A   ++ D++ ++  + G    +  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGDIHIGTAMNKVLKDIIVKYKTMRGYYAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V+        + F        +     L +   +D+   T    +    
Sbjct: 105 AIKTLGIKRHEVSPTEFRKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEANQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++    E    + E+    +
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIEYFDE 204


>gi|325689496|gb|EGD31501.1| leucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 861

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 233

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 234 DLEELDWPESIKDMQRNWI 252



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 102/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 515 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 574

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 575 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 634

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 635 APAKMSKSLRNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 686

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     +++ ++  V    ++ + E ++    + A+AQ++
Sbjct: 687 -KFLDRVYRLIT--------SKEIVADNNGALDKVYHETVKSVTEQIEELKFNTAIAQLM 737

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  L 
Sbjct: 738 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQSLA 777

Query: 479 VADENRCFQSLDQ 491
             DE+  + +   
Sbjct: 778 QTDESISYVAWPT 790


>gi|198429251|ref|XP_002129281.1| PREDICTED: hypothetical protein [Ciona intestinalis]
          Length = 875

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 5/197 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K Y  +   YP+ + H+GH     I+D +A +HR++G  V+   G D  G     AA
Sbjct: 68  GRKKFYCLSMFPYPSGKLHMGHVRVYTISDAMAHYHRMNGKQVIHPMGWDSFGLPAENAA 127

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +    + D+N +  +     L++   ++    T E  ++   + L+ ++   G  Y
Sbjct: 128 LTRNLDPTEWTDKNIKYMKQQLMDLNLFMDWEREFSTCEPSYYKWTQALFVRMFHAGLAY 187

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D     D++V    +          V+    E +F R + Y   LL+  
Sbjct: 188 KQKALVNWDPVDNTVLADEQV---DEEGRSWRSGALVEKRSLEQWFLRTTQYAQSLLNTL 244

Query: 181 ESHPEFILPIERRNEVI 197
           +   E +     +   I
Sbjct: 245 DEIDERVGIKAMQKHWI 261



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 97/315 (30%), Gaps = 63/315 (20%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKF-----WPADLHVIGKDILRFHAIYWPAFLLSA 282
           M  ++D  + Y        N     +K       P DL++ GK+    H  Y        
Sbjct: 486 MDTFVD-SSWYFMRFTDPHNTQEPFSKEKCDHLMPVDLYIGGKEHAILHLYYARFLSHFC 544

Query: 283 --------NLPLPK------------KVFSHGFILHK----------------------G 300
                     P  K            KV + G  LHK                       
Sbjct: 545 ADVGMTVHREPFKKLLAQGIIKGKTYKVKNTGKYLHKDEVTQTGDVVTETSSGEIVETSF 604

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N ++P + + E G+   R F++   A  +   +D               +  
Sbjct: 605 EKMSKSKLNGVEPADFVGEWGITLTRLFVLYAAAPYESIHWDVKTDIIPGVMRWQMKLWR 664

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVI 418
            V R +    +  Y+       + ++ +  I    +  + ++    +   ++  A+  ++
Sbjct: 665 SVGRLLEARQRVPYNNNSTLKDSDSDIELKIAEDTNFAINQVTLCFEETTVLSAAVTSLM 724

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           ++            P  + +  P+   +V            ++    +P   +++++ L 
Sbjct: 725 TVARSC-----MNVPDRIVEQCPEYERSVCAQ--------VVMATPMMPHFTSELWEGLR 771

Query: 479 VADENRCFQSLDQRL 493
                   Q  D+ +
Sbjct: 772 GMKYKLTNQHWDKEV 786


>gi|257053981|ref|YP_003131814.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692744|gb|ACV13081.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 898

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 18/214 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  AR+ R+ G +VL   G D  G     AA+    
Sbjct: 37  YVLGMFPYTSGNLHMGHVRNYAITDAYARYRRMCGDEVLQPMGWDAFGLPAENAAERQLS 96

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + + D    + R+  + +   YD      T++  ++   +  +++  ++G +     +
Sbjct: 97  DPQSWTDTCIEDMREEMEAMGFGYDWNREFTTSDPEYYQWNQWFFERFYEEGLVEYEAAA 156

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ----------------YYNAQHNPVQWMEEEGYFFRL 169
             +    E    D +V    D +                       PV+  E + +FF +
Sbjct: 157 VNWCPNCETVLADAQVESVDDDEDDHDRDGVGGPISSQGVCWRCETPVETRELDQWFFSI 216

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           + Y ++LL   +    +   +          + G
Sbjct: 217 TDYAEELLDGLDDLEGWPESVREIQRNWIGKQEG 250



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 114/359 (31%), Gaps = 55/359 (15%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
             E+             Q Y     PV   EE G            L  YE      L  
Sbjct: 422 CAESSVTYRLRDWLISRQRYWGTPIPVVHCEECGPVLVPEEELPVELPEYEPTAGNPLAE 481

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                  +  + G      +                 M  ++D+   YL           
Sbjct: 482 NEAFVETTCPECGAAARRET---------------DTMDTFVDSSWYYLRFLTADHGDAP 526

Query: 251 SK----AKFWPADLHVIGKDILRFHAIYWPAFLLSA------NLPLP-KKVFSHGFILHK 299
                  ++ P D++V G++    H +Y   F          + P P +++ + G +LH 
Sbjct: 527 FDTAQADEWLPVDVYVGGEEHAVLHLLYIRFFAHVLADLGLLDEPEPVQRLVNQGTVLHG 586

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           GEK+S + GNVI P E     G +  R F++      +D  +    +      DL   + 
Sbjct: 587 GEKMSTAKGNVITPHE----YGPETTRLFVLGAAHPRQDFEWTAKDVSSAY--DLQQQLY 640

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           ++V          +             D+ +     R +    E       HRA++++ S
Sbjct: 641 DMVR--------AFTEADAGRSEREPRDDYLDREIDRTIAATTEEFDAFRFHRAISEIRS 692

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVL-YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L   + +Y +              A  V   V    ++ L  L+    P LA +++++L
Sbjct: 693 LAGVLGQYVE--------------AGPVHEAVYRRGLKTLTALIAPITPYLAEELWNLL 737


>gi|15292509|gb|AAK93523.1| SD04748p [Drosophila melanogaster]
          Length = 1049

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 130/426 (30%), Gaps = 99/426 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 453 PICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWY-HWMDGIRDW 511

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 512 CVSRQ-LWWGHRIPAYHVSFTDPSLQTGSNDDEQYWIVARSEAEALTKAADRFGVDASKI 570

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ D        F+P  L   G DIL F    + +  
Sbjct: 571 VLKQDEDVLDTWFSSGIFPFSVFGWPDQTK-DLQTFYPTSLLETGHDILFFWVARMVFFG 629

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 630 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGSNLDPR 689

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + +         N + N
Sbjct: 690 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVLG--YRFFCNKLWN 747

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++      + +D  +       + D  ILS  +  ++      ++     A +   
Sbjct: 748 ATKFALLYFTGSEKFDTELSASATINQMDAWILSRLAAAIEACNTGFESYDFAAATSACY 807

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFD 475
           +       D Y +  KP  + ++  +   T    T+ V +     LL  F+P +  +++ 
Sbjct: 808 AFWLYDLCDVYLECLKP--IFQSGSEEQQTAARRTLYVCLDYGLRLLSPFMPFITEELYQ 865

Query: 476 ILFVAD 481
            L  A+
Sbjct: 866 RLPRAN 871



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 130 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 189

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      +    L  SYD      T + +     
Sbjct: 190 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPKLCRAV 249

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 250 TEAFVRLHEEGSIYRSSRLVNWSC 273


>gi|21674468|ref|NP_662533.1| leucyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|48428547|sp|Q8KBY2|SYL_CHLTE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21647656|gb|AAM72875.1| leucyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 807

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 11/219 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +E+ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    +
Sbjct: 28  QEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  ++N  +FR+    +  SYD    I TT+  +    + ++ K+ +KG 
Sbjct: 88  FAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREINTTDPNYFKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +    +    ++EV +     Y       V       +  +++AY ++LL 
Sbjct: 148 AYISEVDVNWCEELKVVLANEEVDEKIADGYT------VVRRPLRQWVLKITAYAERLLK 201

Query: 179 YYE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +    PE +  ++R     S       +L   R    
Sbjct: 202 DLDEVDWPENVKQMQRNWIGRSEGMEIDFELRCHRTNLR 240



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 96/270 (35%), Gaps = 43/270 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +         +  +   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPQNSDALVDPSLEQYWMNVDLYIGGAEHAVLHLLYSRFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  +       +    EK+SKS GNVI    V+   G DALR + + 
Sbjct: 546 KVLYDLGVVSTKEPFQRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADALRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++  G++    +   N +  LV        ++ +    T    +E+   IL
Sbjct: 606 LGPLDQVKPWNTHGIEGI--SRFLNKVWRLVWD------ENTETQKTTEDKPSEA---IL 654

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ +    + A+++++ LV+E                           +
Sbjct: 655 KRMHKAIKKVTEDTEQLKFNTAISEMMVLVNE--------------------LHKAGCYS 694

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E    L +LL  F P +  +++  L  A+
Sbjct: 695 RETTETLLVLLSPFAPHITEELWQALGHAE 724


>gi|148242287|ref|YP_001227444.1| leucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|189083177|sp|A5GT82|SYL_SYNR3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147850597|emb|CAK28091.1| Leucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 864

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E  Y  +   YP+   H+GH    +I DV+AR  RL G  VL   G D  G     AA  
Sbjct: 38  ENFYALSMFPYPSGNLHMGHVRNYVITDVIARLMRLKGKRVLHPMGWDAFGLPAENAAIE 97

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    + D+N    R+    L +S D    + T    ++   + L+ +  +    Y+ 
Sbjct: 98  RGVDPADWTDRNIAQMREQLQRLGLSIDWSREVATCHSDYYRWTQWLFLQFLNADLAYRK 157

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V   ADG+ + +     +  +   +F +++A  D+LL   E 
Sbjct: 158 EATVNWDPIDQTVLANEQV--DADGRSWRSGA-LAEKRKLRQWFLKITAVADELLDDLEQ 214

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +           SG
Sbjct: 215 LKGWPERVRTMQANWIGRSSG 235



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 22/181 (12%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  V++  G D  R F++ +    KD  +D   ++ +        I 
Sbjct: 620 FEKMSKSKYNGVDPGAVVDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRIW 677

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM--QNQLIHRALAQV 417
            L   + +  L+     +P P   T ++  +       ++ + +++       + A++++
Sbjct: 678 RLCDGAKASGLQ-LQSPLPLPAELTPAETDLRRAVHTAIEAVSDDLQGDELQFNTAVSEL 736

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDI 476
           + L + +                  +   V   V  E +R L +LL  F P LA+++++ 
Sbjct: 737 MKLSNAM----------------AGQLEAVSTAVAQEAVRSLLLLLAPFAPHLADELWEQ 780

Query: 477 L 477
           L
Sbjct: 781 L 781


>gi|328945290|gb|EGG39443.1| leucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 837

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 33  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRARGYNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 93  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 153 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 209

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 210 DLEELDWPESIKDMQRNWI 228



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 491 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLRAWLPVDIYIGGAEHAVLHLLYARFWH 550

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 551 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 610

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 611 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 662

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 663 -KFLDRVYRLLN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 713

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 714 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 753

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 754 QTGESISYVTWPT 766


>gi|21672694|ref|NP_660761.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009349|sp|Q8K9B9|SYL_BUCAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21623335|gb|AAM67972.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 861

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK Y    + YP+ + H+GH     I+DV++R+ R+ G +VL   G D  G    +AA
Sbjct: 31  KKEKYYCLPMLPYPSGKLHMGHVRNYTISDVISRYQRMLGKNVLQPIGWDAFGLPAEEAA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +  +N +  +     L  SYD    I T +  ++   +  + ++  K  +Y
Sbjct: 91  IKNKTKPSDWTQKNIKYMKKQLQSLGFSYDWSREITTCKPDYYCWEQWFFIQLYKKKLVY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           K      +   D+    +++V KG          N ++  +   +F ++  Y + L +  
Sbjct: 151 KKNSFVNWCPYDKTVLANEQVIKG----CCWRCQNKIKVKKIPQWFIKIRNYAESLHNDL 206

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
                +   ++           G
Sbjct: 207 NDLENWPEKVKNMQRNWIGRSKG 229



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 69/178 (38%), Gaps = 19/178 (10%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS  N I+P  +I   G D LR F++          + + G+K          I  L
Sbjct: 620 KMSKSKNNGIEPELMINRYGADTLRLFIMFAAPIESSLEWRESGVKGIYR--FLKKIWKL 677

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISL 420
           V   + +   +            +  + +  +  + + ++ +++  +   + A++ ++ L
Sbjct: 678 VFNHIEVKKIN---KKVNFDILNKKQKKMYCLLHKTIIKVSDDIGRRKSFNTAISSIMEL 734

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+E+  +          K   +   +++    E +  +  +L  F P    +++  L 
Sbjct: 735 VNELSIF----------KIENEEDKSIIK---ESLMSIIKMLYPFTPHFCFRLWQYLN 779


>gi|152977105|ref|YP_001376622.1| leucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082981|sp|A7GU19|SYL_BACCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152025857|gb|ABS23627.1| leucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 802

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TDKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEKNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEIPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 60/427 (14%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +      K++   GDI K  Y+      D A+ N    ++ + K  +    
Sbjct: 341 HDERDYEFAKTFDLPMKEVVKGGDITKEAYTADGEHIDSAFLNGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
               N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TGAGNQKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTMTAVKEEELPLVLPKTDNIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +N    D  KAK 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNNEALVDPEKAKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   +  +       ++ +     + ++++ E+ +    + A++Q++  +++  +
Sbjct: 632 RLFVQENGEL--SEKITDAPNKELEKAYHQTVKKVTEDYEELHFNTAISQMMMFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     LL    P +A +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKLLAPVAPHIAEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|311069521|ref|YP_003974444.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870038|gb|ADP33513.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 804

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 7/208 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G    +F  QN  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAIFTKQNIDNFRRQIQALGFSYDWDREINTTDPGYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++E+  G          +PV+      +  +++AY D+LL  
Sbjct: 149 YVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYADRLLDD 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDL 207
            E         + +   I   +      
Sbjct: 205 LEELDWPESIKDMQRNWIGRSEGAHVHF 232



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 90/264 (34%), Gaps = 42/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+            K   W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRYIDPHNPDQLASPEKLDKWLPVDMYIGGAEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  +       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDIGVVPTKEPFQQLYNQGMILGENNEKMSKSKGNVVNPDEIVSSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   + ++D   +         + E++  V 
Sbjct: 609 LDASIAWSESGL---------DGARRFLDRVWRLFIEDSGELNSKITEG--ASETLERVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              + ++ ++ +    +  ++Q++  ++E  +                       +  E 
Sbjct: 658 HETVMKVTDHYEGLRFNTGISQLMVFINEAYK--------------------ASELPKEY 697

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
           +     LL    P LA +++  L 
Sbjct: 698 VEGFVKLLSPVAPHLAEELWTRLG 721


>gi|207723733|ref|YP_002254131.1| valyl-trna synthetase (valine--trna ligase) protein [Ralstonia
           solanacearum MolK2]
 gi|206588937|emb|CAQ35899.1| valyl-trna synthetase (valine--trna ligase) protein [Ralstonia
           solanacearum MolK2]
          Length = 972

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/395 (15%), Positives = 127/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +     ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 389 PEGTRFPGRSIAEVALDAVQGGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 446

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  +     ++ G+  +   
Sbjct: 447 AWYDEAGNVYVARTEEDARAQAAAKGHTGALTRDDDVLDTWFSSALVPFSSLGWPADTPE 506

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 507 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFQTVYVHGLVRDSEGKKMSKSEG 565

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 566 NTLDPVDLIDGIALEPLLAKRTTGLRRPKDAPNVEKRTRKEFPEGIPAFGADALRFTFAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G++  +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 626 LATLGRNINFDSSRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGLQECVGDCGPEGALH 682

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+ +D  I+S+  RV  E+ +   +         +   V +   D Y +  K  +++   
Sbjct: 683 FSPADRWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWYLELAKV-QIQTGT 741

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 742 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 776



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 38  GRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMQGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGVSRHDLGRPAFVDKVWEWKAQSGSTITRQIRRMGASIDWEHEYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               ++ ++ ++G IY+G     +        +D EV    +         P+   + +
Sbjct: 158 AVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEEGALWHIRYPLSQPDTK 216


>gi|15615843|ref|NP_244147.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|14285778|sp|Q9K7S8|SYL_BACHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10175904|dbj|BAB07000.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 806

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + REK Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  ETREKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F ++N   FR     L  SY  D  + TT+  ++   + ++ ++ +KG 
Sbjct: 88  YAIDTGNSPAEFTEKNINTFRRQIKSLGFSYDWDREVNTTDPDYYKWTQWIFIQLYNKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++ Y D+LL 
Sbjct: 148 AYIDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITEYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEELDWPESIKDMQRNWIGRSE 226



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 40/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNERMIADPEKLKKWLPVDIYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P ++I+  G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDDIIDSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL         +G    + R   +++ +      +     E    +    
Sbjct: 609 LDASIAWSTTGL---------DGARRFLDRVWRLLVDENTEEKSSKIVNGEGSPELKRAY 659

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +    +  ++Q++  V+E  +    + P +  +                
Sbjct: 660 HQTVKKVTEDFEELRFNVGISQLMVYVNEAYK--QEELPLDQAEG--------------- 702

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
                 LL    P LA +++  L 
Sbjct: 703 ---FVKLLSPVAPHLAEELWSKLG 723


>gi|304383075|ref|ZP_07365550.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335761|gb|EFM02016.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 1143

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 111/298 (37%), Gaps = 13/298 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    +      +       + G  +  +   ++ VW D+         Y  
Sbjct: 576 FVPGDYSKENYERIDMHRPYVDHIVLVSNTGKALKRETD-LIDVWFDSGAMPYAQVHYPF 634

Query: 247 NPD--GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +  KG K
Sbjct: 635 ENKEAIDNRLAFPADFINEGVDQTRGWFFTLHAIATMVFDSIAFKNVISTGLVLDAKGNK 694

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK +GNV++P ++I++ G DA+R++++       +  +D++G+ +              
Sbjct: 695 MSKRVGNVVNPFDMIDKYGADAVRFYMMTNSEPWDNLKFDENGVDEVRRKLFGTLYNTYS 754

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S+   +  +    P        E D  +LS    +++ +    +N    RA   + + 
Sbjct: 755 FFSLYANVDGFTYSEPDVPLNERPEIDRWVLSCLHSLVKAVISEFENYDPTRAGRLIDAF 814

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V++   + Y   + ++ W   K       +        +  +A LL    P  A++++
Sbjct: 815 VNDDLSNWYVRLNRKRFW--GKEMSKDKLSAYQTLYTCLETVAKLLAPMTPFYADRLY 870



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
                       N  P I H     I D   R+  + G  V    G D HG  +  + + 
Sbjct: 41  PPFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMRGFQVRRKAGWDTHGLPVELSVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V   +  +R + + +   I  D    T + 
Sbjct: 101 ELGITKADIDNKDSEKYISVADYNRKCRENVMMFTTEWRRLTESMGYFIDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ +K  +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLKQLYEKNLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|228999529|ref|ZP_04159107.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760240|gb|EEM09208.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 802

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG 
Sbjct: 88  YALDTGNSPAEFTEKNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEIPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDDLDWPESLKDMQRNWIGRSE 226



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 146/427 (34%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  ++    + +    GDI K  Y+G     + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFAQVFSLPMKEVVKGGDITKEVYTGDGPHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEAPVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +      S++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDASNQELEKAYHQTVKKVTEDYAELRFNTAISQMMMFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +A +++  L  ++     
Sbjct: 690 --------------------TEVLPKEYVEGFVKMIAPVAPHVAEELWSKLGHSETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|326560993|gb|EGE11358.1| valyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 975

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/413 (15%), Positives = 127/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVI------------------------------------- 317
               +G+K+SKS GNV+DPI++I                                     
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPDGI 619

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+      + G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PTFGTDALRFTYASLASTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E+M           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNTTINDIHEHMSQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASGQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++ D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVRLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|254884512|ref|ZP_05257222.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319640796|ref|ZP_07995509.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254837305|gb|EET17614.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317387608|gb|EFV68474.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 1162

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 118/327 (36%), Gaps = 15/327 (4%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE Y     +     ++      +  +P E   E    +      +       + G  + 
Sbjct: 567 EELYDEIEKSIAAGFMTVNPYKEKGFVPGEYNGENYDKIDLHRPYVDDIILVSESGKPMK 626

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPA 277
            +   ++ VW D+         Y            ++PAD    G D     F  ++  A
Sbjct: 627 READ-LIDVWFDSGAMPYAQLHYPFENKEIVDNRTYYPADFIAEGVDQTRGWFFTLHAIA 685

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   
Sbjct: 686 TMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGAIEQYGSDPLRWYMITNSSPWD 745

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVC 394
           +  +D DG+ + V       + N  S        D   Y           E D  ILSV 
Sbjct: 746 NLKFDTDGVDE-VRRKFFGTLYNTYSFFALYANVDGFAYQEAEVPVNERPEIDRWILSVL 804

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYV 450
           + +++ +     +    +A   +   V++   + Y   + ++ W    +  D+ S     
Sbjct: 805 NSLVKNVDACYNDYEPTKAGRLITDFVNDNLSNWYVRLNRKRFWGNAMS-QDKLSA-YQT 862

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
               +  +A L+    P  A++++  L
Sbjct: 863 LYTCLETVARLMAPIAPFYADRLYTDL 889



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +  ++   T 
Sbjct: 94  VELGVEKALHITKEDIGKTISVAEYNAACRKDVMKFTKEWTDLTHKMGYWVDLENPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++ +KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|150005574|ref|YP_001300318.1| isoleucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|149933998|gb|ABR40696.1| isoleucyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 1162

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 118/327 (36%), Gaps = 15/327 (4%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE Y     +     ++      +  +P E   E    +      +       + G  + 
Sbjct: 567 EELYDEIEKSIAAGFMTVNPYKEKGFVPGEYNGENYDKIDLHRPYVDDIILVSESGKPMK 626

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPA 277
            +   ++ VW D+         Y            ++PAD    G D     F  ++  A
Sbjct: 627 READ-LIDVWFDSGAMPYAQLHYPFENKEIVDNRTYYPADFIAEGVDQTRGWFFTLHAIA 685

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   
Sbjct: 686 TMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGAIEQYGSDPLRWYMITNSSPWD 745

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVC 394
           +  +D DG+ + V       + N  S        D   Y           E D  ILSV 
Sbjct: 746 NLKFDTDGVDE-VRRKFFGTLYNTYSFFALYANVDGFAYQEAEVPVNERPEIDRWILSVL 804

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYV 450
           + +++ +     +    +A   +   V++   + Y   + ++ W    +  D+ S     
Sbjct: 805 NSLVKNVDACYNDYEPTKAGRLITDFVNDNLSNWYVRLNRKRFWGNAMS-QDKLSA-YQT 862

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
               +  +A L+    P  A++++  L
Sbjct: 863 LYTCLETVARLMAPIAPFYADRLYTDL 889



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +  ++   T 
Sbjct: 94  VELGVEKALHITKEDIGKTISVAEYNAACRKDVMKFTKEWTDLTHKMGYWVDLENPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++ +KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|328871005|gb|EGG19377.1| valyl tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1070

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 77/391 (19%), Positives = 139/391 (35%), Gaps = 59/391 (15%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG---I 218
           ++    R   +  ++ +Y         P     E     ++  + L+++ K F+     I
Sbjct: 523 KDWCVSRQLWWGHRIPAYLARIQGRPEPDHFDMENWVVGETKEEALAVALKRFNVAADQI 582

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWP 276
            +  DP  ++  W  +     +T G+ +        F+P  L   G DIL F    +   
Sbjct: 583 SLEQDPD-VLDTWFSSGLFPFSTMGWPEKTA-DMENFYPTSLLETGSDILFFWVARMVMM 640

Query: 277 AFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVI------------------ 317
              L+  LP  K+VF H  +    G K+SKSLGNVIDP +VI                  
Sbjct: 641 GQQLTGQLPF-KQVFLHAMVRDSHGHKMSKSLGNVIDPTDVINGISLNQLQENLKTGNLE 699

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ L    + G+D   + D L+        N I
Sbjct: 700 QKEFTRASAALKLDYPNGIPECGTDALRFALCAYTSQGRDI--NLDILRVDGYRRFCNKI 757

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N    ++  +  DY  +     A     +  +  IL+  +R ++ + +  ++     A 
Sbjct: 758 WNATRFALMKLGTDYKPIDFDAEALINNSSSVNRWILNAAARAIRLVDQGFKDYDFAAAT 817

Query: 415 AQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             + +       D Y +  KP +     + +      +     I     LL  F+P L  
Sbjct: 818 TAIYNFWLHELCDFYLETTKPIFSDDNNDAEDKLRTKHTLYTCIEIGLKLLHPFMPYLTE 877

Query: 472 KIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
           +++  +     +R   +L   +   F L + 
Sbjct: 878 ELYQSI----AHRPSDNLPTIMLAQFPLEQP 904



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 19/162 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ +K  I           H+GHA    I D + R+HR+ G   L+  GTD  G     
Sbjct: 138 VQKDKKFVIVIPPPNVTGSLHLGHALTNSIQDAIVRYHRMKGEVALWVPGTDHAGIATQA 197

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +   +                     + D+     ++    L  S D      T +  
Sbjct: 198 VVEKKLMRERNITRHEIGREQFVSEVWKWKDEYGSRIQNQLKKLASSLDWKREAFTLDDT 257

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                   + ++ + G I +      +S   +   +D EV  
Sbjct: 258 RSRAVNTAFVRMFNDGLITRSSRLVNWSCALKTAISDIEVDY 299


>gi|56421377|ref|YP_148695.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|60390659|sp|Q5KW09|SYL_GEOKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56381219|dbj|BAD77127.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 805

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NFR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIDNFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  +++AY D+LL  
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVING----RSERGGHPVIRKPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 205 LEELDWPESIKEMQRNWIGRSE 226



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/415 (14%), Positives = 138/415 (33%), Gaps = 61/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     + +    GDI K  Y+G     +  + N     +  D      + 
Sbjct: 341 HDERDYEFAKKFHLPMKEVVAGGDIEKEPYTGDGEHINSEFLNGLNKQEAIDKMIAWLEE 400

Query: 155 N----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +             + F    Y  + +         + P+      +   K+     S +
Sbjct: 401 HGKGRKKVSYRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVPEEELPLVLPKTDEIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKF 255
            ++    I+   +                M  W  +   YL      ++       K K 
Sbjct: 461 GESPLANIEEWVNVVDPKTGKKGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLKK 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDVYIGGAEHAVLHLLYARFWHKFLYDLGIVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P ++IE  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + +   + P       +++++  +  + ++++ E+ ++   + A++Q++  ++E  +
Sbjct: 632 RLFVTENGELNPNIVD-EPANDTLERIYHQTVKKVTEDYESLRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               +K                    E +     LL    P +  +++  L   D
Sbjct: 691 AEQMKK--------------------EYMEGFVKLLSPVCPHIGEELWQKLGHTD 725


>gi|83746527|ref|ZP_00943578.1| Valyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207743841|ref|YP_002260233.1| valyl-trna synthetase (valine--trna ligase) protein [Ralstonia
           solanacearum IPO1609]
 gi|83726858|gb|EAP73985.1| Valyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206595241|emb|CAQ62168.1| valyl-trna synthetase (valine--trna ligase) protein [Ralstonia
           solanacearum IPO1609]
          Length = 972

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/395 (15%), Positives = 127/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +     ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 389 PEGTRFPGRSIAEVALDAVQGGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 446

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  +     ++ G+  +   
Sbjct: 447 AWYDEAGNVYVARTEEDARAQAAAKGHTGTLTRDDDVLDTWFSSALVPFSSLGWPADTPE 506

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 507 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFQTVYVHGLVRDSEGKKMSKSEG 565

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 566 NTLDPVDLIDGIALEPLLAKRTTGLRRPKDAPNVEKRTRKEFPEGIPAFGADALRFTFAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G++  +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 626 LATLGRNINFDSSRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGLQECVGDCGPEGALH 682

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+ +D  I+S+  RV  E+ +   +         +   V +   D Y +  K  +++   
Sbjct: 683 FSPADRWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWYLELAKV-QIQTGT 741

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 742 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 776



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 38  GRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMQGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGVSRHDLGRPAFVDKVWEWKAQSGSTITRQIRRMGASIDWEHEYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               ++ ++ ++G IY+G     +        +D EV    +         P+   + +
Sbjct: 158 AVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEEGALWHIRYPLSQPDTK 216


>gi|322384958|ref|ZP_08058614.1| leucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150255|gb|EFX43762.1| leucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 814

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+R+ R+ G +VL   G D  G    +
Sbjct: 35  SGKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMRGYNVLHPMGWDAFGLPAEQ 94

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   +    +N   FR     L  SY  D  I TT+  ++   + ++ ++  KG 
Sbjct: 95  HALDTGEHPRDITVKNINTFRRQIKSLGFSYDWDREISTTDPNYYKWTQWIFIQLYKKGL 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++ Y ++LL 
Sbjct: 155 AYVDEIPVNWCEALGTVLANEEVIDGKS----ERGGHPVIRKPMRQWVLKITEYAERLLD 210

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   K
Sbjct: 211 DLEELDWPESLKDMQRNWIGKSK 233



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 99/265 (37%), Gaps = 41/265 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+      +     K   W P DL++ G +    H +Y   +    
Sbjct: 498 PQWAGSCW--YYLRYIDPHNDKELCSFEKQMEWLPVDLYIGGVEHAVLHLLYARFWHKVL 555

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                ++   P  K V     +    EK+SKS GNV++P  +++E G D LR + +    
Sbjct: 556 YDLGIVTTKEPFHKLVNQGMILGENMEKMSKSRGNVVNPDVIVDEYGADTLRLYEMFMGP 615

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSV 393
                      + K  N +   G    ++R   + + D   +        ++  +S   V
Sbjct: 616 L---------EVTKPWNTNGVEGAHRFLNRIWRLFINDSGELSGKISKTEKNGSDSFKRV 666

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++++ E+M+    + A++Q++  V+E  +                       +  E
Sbjct: 667 WHKTVKKVTEDMEALRFNTAISQLMIFVNEAYK--------------------TDVLPYE 706

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
            ++    +L    P +A ++++ L 
Sbjct: 707 AMKDFVQMLSPIAPHIAEELWEKLG 731


>gi|189083220|sp|A3CKP1|SYL_STRSV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 833

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRTQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEELDWPESIKDMQRNWI 224



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRCALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +          +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLFN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 710 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 749

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 750 QTGESISYVTWPT 762


>gi|238027766|ref|YP_002911997.1| valyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876960|gb|ACR29293.1| Valyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 956

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 120/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   +S     + +      G  + 
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARSEANARAQAAAKGYAG-TLR 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSSLGWPNETP-ELQHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------- 319
            +  +P             +G+K+SKS GN +DPI++++                     
Sbjct: 520 FTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIALEDLVAKRTTGLMNPKQA 579

Query: 320 -----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ASIEKKTRKEFPDGIAAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  EI +   +  
Sbjct: 637 TRFVLMNCEGHDCGRDKPEPCGDGGCGPGGYLDFSAADRWIVSLLQRVEAEIAKGFDDYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYVELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           +R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 36  DRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMRGDNTLWVPGTDHAGIATQIVV 95

Query: 60  ------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +      +  + FV++  +             R +    D S + F  T + + 
Sbjct: 96  ERQLDAQRVSRHDLGREQFVERVWQWKEKSGSTITNQVRRLGASTDWSREYF--TMDDKL 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++ ++ ++G IY+G     +        +D EV    +       + P+
Sbjct: 154 SSVVREVFVQLYEQGLIYRGKRLVNWDPVLMTAVSDLEVASEEEDGSLWHINYPL 208


>gi|228993492|ref|ZP_04153401.1| Leucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766207|gb|EEM14852.1| Leucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 802

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG 
Sbjct: 88  YALDTGNSPAEFTEKNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEIPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDDLDWPESLKDMQRNWIGRSE 226



 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 146/427 (34%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  ++    + +    GDI K  Y+G     + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFAQVFSLPMKEVVKGGDITKEVYTGDGPHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +      S++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDASNQELEKAYHQTVKKVTEDYAELRFNTAISQMMMFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P  A +++  L  ++     
Sbjct: 690 --------------------TEVLPKEYVEGFVKMIAPVAPHAAEELWSKLGHSETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|325300669|ref|YP_004260586.1| Isoleucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324320222|gb|ADY38113.1| Isoleucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 1161

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 113/302 (37%), Gaps = 15/302 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E  + +      +         G  +  +   ++ VW D+ +       Y  
Sbjct: 592 FVPGKYTKENYNKIDLHRPYVDDIILVSPAGKPMKREAD-LIDVWFDSGSMPYAQLHYPF 650

Query: 247 NPD--GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                     ++PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELIDSGSYYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   A   +  +D DG+ + V       + N  
Sbjct: 711 MSKRLGNAVDPFSTIEKFGSDPLRWYMITNSAPWDNLKFDTDGVDE-VRRKFFGTLYNTY 769

Query: 363 SRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           S        D   Y           E D  ILS+ + +++++     +    +A   +  
Sbjct: 770 SFFALYANVDGFTYAEKEVPVSERPEIDRWILSLLNSLIKDVDACFNDYEPTKAGRLITD 829

Query: 420 LVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V++   + Y   + ++ W    +  D+ S         +  +A L+    P  A++++ 
Sbjct: 830 FVNDNLSNWYVRLNRKRFWGSAMS-QDKLSA-YQTLYTCLETVAKLMAPIAPFYADRLYM 887

Query: 476 IL 477
            L
Sbjct: 888 DL 889



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   R+  + G  V    G D HG  
Sbjct: 34  MTEREGHPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTT 98
           +    + A   TK  +                  + ++ + D+   +   +  D+   T 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNQHCRTDVMKFTKEWTDLTHKMGYWVDLDNPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L +++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLQQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDLTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKIKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|86152674|ref|ZP_01070879.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613441|ref|YP_001000769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166231595|sp|A1W078|SYL_CAMJJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85843559|gb|EAQ60769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249151|gb|EAQ72112.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 809

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVAQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 42/261 (16%)

Query: 234 ALTNYLTTTGYLDNPDGSKA------KFW-PADLHVIGKDILRFHAIYWPAF-------- 278
             + Y       +     KA      K+W   D ++ G +    H +Y   F        
Sbjct: 497 ESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLG 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L+ N P   ++ + G +L  G K+SKS GNV+DP E+IE+ G D  R F++      K+
Sbjct: 557 YLTQNEPF-DRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKE 615

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI-LSVCSRV 397
             ++ D ++          I  L  R+    +K  + +        + ++   L V   +
Sbjct: 616 LEWNDDAVEGA-----YRFICKLYDRA--QNVKKGELVELKQENLNKEEKYARLKVYEAL 668

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +      Q+   +  +A  +  ++ +           L K              E    
Sbjct: 669 KKSFEVYHQSFAFNTLIAACMEALNAL----------ALCKNEALEQ--------EAFYI 710

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +  +L+  +P +  ++ + LF
Sbjct: 711 ILNILEPIIPHVCFELSEELF 731


>gi|328876343|gb|EGG24706.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 979

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 82/214 (38%), Gaps = 7/214 (3%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K Y  +   YP+   H+GH     ++D +AR  R+ G DV+   G D  G     AA   
Sbjct: 74  KYYSLSQFPYPSGNLHMGHVRVYTMSDCVARLKRMQGYDVVHPMGWDAFGLPAENAAIEK 133

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
            V+   + + N    R    +LD+ +D    + T +  ++   + ++ ++   G   +  
Sbjct: 134 NVSPSKWTNSNIDEMRRQFKLLDLEFDWNRELSTCDPSYYRWTQEIFLRLYRAGLATRKI 193

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
               +   D     +++V            +  V+  E + ++F ++ Y D+L    +  
Sbjct: 194 AIVNWDPVDNTVLANEQVDAT---GRSWRSNAIVERREMKQWYFHITKYADRLADDLQKL 250

Query: 184 PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
             +  P E +N    ++      L   +     G
Sbjct: 251 DGW--PDEVKNMQREWIGRSHGYLLDFKYNQTNG 282



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 79/193 (40%), Gaps = 21/193 (10%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P    +   +    EK+SKS  N ++P E+I + G D L+ +++ +    K   +D +G+
Sbjct: 636 PINASNGNPVNITIEKMSKSKLNGMEPSEMISQYGSDILKLYILFKAPPEKSLEWDTEGI 695

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIREN 404
           +          +  + +   S + +         G F + +  + +       +  + ++
Sbjct: 696 EGC-----RKWLKRVETLVKSFVDEYSANKQSFIGEFGKVEGVKPLRYETHSTIDNVTQS 750

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           ++    +  +A +++L +             L K  P + +++ +   E +R L ILL  
Sbjct: 751 IEKYTFNTGIAFLMTLSN------------TLAKVEPSQRNSLEF--YESVRTLVILLAT 796

Query: 465 FVPKLANKIFDIL 477
           F P  A   + +L
Sbjct: 797 FAPNTAQDYWKML 809


>gi|123966204|ref|YP_001011285.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|189083138|sp|A2BWL7|SYL_PROM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123200570|gb|ABM72178.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 864

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++EK Y  +   YP+   H+GH    +I D++ARF R  G  +L   G D  G     A
Sbjct: 45  SKKEKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFQGKSLLHPMGWDAFGLPAENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+    +  +N  + +    +L +S  +D    T ++ ++   + L+ ++   G +
Sbjct: 105 AIERGINPNDWTKKNIAHMKSQLKLLGLSVDWDKEFATCDENYYLWTQFLFLELHKSGLV 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V          A+   V+      +F +++ Y ++LL  
Sbjct: 165 YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGAK---VEKKLLTQWFLKITNYTEELLQD 221

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            E   E+   ++   E       G
Sbjct: 222 LEKLSEWPERVKIMQENWIGKSKG 245



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 28/182 (15%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N IDP  VI++ G D  R F++ +    KD  +    ++ +        I 
Sbjct: 626 FEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLEWGDSDVEGQYR--FLCRIW 683

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            L      +  ++ +          E + S+    +  ++EI  +++N   + A+++++ 
Sbjct: 684 KLF-----LDYRNNESWDNQKNYNREKENSLTKSINIAIKEISNDIKNNQFNTAISELMK 738

Query: 420 LVSEVDR---YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             + +     Y +     +L+K                 ++  ILL  F P +A +I+++
Sbjct: 739 FYNSLSSSMIYVNK----DLRKD--------------AFKKFCILLAPFAPHIAEEIWNL 780

Query: 477 LF 478
           + 
Sbjct: 781 IG 782


>gi|329942953|ref|ZP_08291732.1| leucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848119|emb|CBY17120.1| putative leucyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507025|gb|ADZ18663.1| leucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815213|gb|EGF85202.1| leucyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914794|gb|AEB55627.1| leucyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 820

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 80/224 (35%), Gaps = 7/224 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD      T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTKKNIENFRKQLSAMGFSYDEGREFATSDPDYYRWTQKLFLFLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  Y         ++EV  G           PV+      +  R++AY D+LL  
Sbjct: 149 YMADMAVNYCEELGTVLANEEVENG----LSVEGGYPVERRMLRQWILRITAYSDQLLQG 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            E         + +   I   +  L    +    F        D
Sbjct: 205 LEDLDWPENVKQLQRNWIGKSEGALVRFEVDNGNFLSVFTTRPD 248



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 102/313 (32%), Gaps = 83/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +          ++W P DL++ G +    H +Y   W 
Sbjct: 479 ETHTMPQWAGSCWYYLRFCDAHNSQAPWSNENERYWMPVDLYIGGAEHAVLHLLYSRFWH 538

Query: 277 AFLLSANL-----PLPKKV----------------FSHG---------FILHKGE----- 301
                A L     P  K +                + H          +    GE     
Sbjct: 539 RVFYEAGLVSTPEPFKKLINQGLVLATSYRIPGKGYVHPEDVREDNGKWTTASGEELEVR 598

Query: 302 --KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS  N +DP  +I+E G DALR + +      K+  +   G+          G  
Sbjct: 599 QEKMSKSKLNGVDPQTLIDEFGADALRMYAMFSGPLDKNKLWCNHGVS---------GCR 649

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   ++         +       D   +++  +++  + E+++   ++   +  + 
Sbjct: 650 RFLNRFYELVT--------SSAVQDVDDPKGMALAHKLVHRVGEDIEKMSLNTIPSSFME 701

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++E  +            T P  A          +  +   L    P ++ +++ IL  
Sbjct: 702 FINEFTKL----------DTYPKSA----------LAMVVRALAPIAPHISEELWTILGY 741

Query: 480 AD--ENRCFQSLD 490
           A   +   +  +D
Sbjct: 742 APGIDKAEWPEVD 754


>gi|156849147|ref|XP_001647454.1| hypothetical protein Kpol_1018p134 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118140|gb|EDO19596.1| hypothetical protein Kpol_1018p134 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1124

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 130/376 (34%), Gaps = 48/376 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y  + E               ++  +  + ++  F       +  
Sbjct: 585 WCISRQLWWGHRCPVYFVNIEGQENDRIDGNYWVAGRNVEEAETKAKAKFPDAKFTLEQD 644

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +        F+P  +   G DIL F    +      L+ 
Sbjct: 645 EDVLDTWFSSGLWPFSTLGWPNKTK-DMENFYPFSMLETGWDILFFWVSRMILLGIKLTG 703

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
           N+P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      ++   
Sbjct: 704 NIPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVIGGIKLEDLHAKLLTGNLDPREVEK 762

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I      ++
Sbjct: 763 AKTGQRESYPNGIPQCGTDAMRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFAL 822

Query: 367 SMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             +  DY         G  +  ++ IL+  +   + + E ++N+    + + +       
Sbjct: 823 MRLGDDYQPQANEGLSGNESLVEKWILTKLTNTSKVVNEALENRDFLTSTSAIYEFWYLI 882

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K + +++ +P    +       ++     ++  F+P ++ +++  L      
Sbjct: 883 CDIYIENSK-YLIQEGSPVEQKSAKDTLYILLDNALKMIHPFMPFISEEMWQRLP----K 937

Query: 484 RCFQSLDQRLKPGFML 499
           R  +  D  +K  + +
Sbjct: 938 RSSEKSDTIVKASYPV 953



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VL+  G D  G       +   
Sbjct: 201 FCIPAPPPNVTGALHIGHALTISIQDSLVRYYRMKGKTVLWLPGFDHAGIATQSVVEKQI 260

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T + +  D   
Sbjct: 261 WAKEKKTRHDYGREAFISKVWEWKEEYHNRIKNQIMKLGASYDWSREAFTLDPKLTDAVV 320

Query: 108 ILWKKISDKGDIYK 121
             + ++ D G IY+
Sbjct: 321 EAFVRLHDDGTIYR 334


>gi|134282390|ref|ZP_01769095.1| valyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246428|gb|EBA46517.1| valyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 955

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCSFDKPDVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|125717163|ref|YP_001034296.1| leucyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125497080|gb|ABN43746.1| Leucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 837

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 33  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRTQGYNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 93  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 153 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 209

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 210 DLEELDWPESIKDMQRNWI 228



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 491 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 550

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 551 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRCALVATDKVEKRDGSFFNIETGEELEQ 610

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 611 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 662

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +          +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 663 -KFLDRVYRLFN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 713

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 714 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 753

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 754 QTGESISYVTWPT 766


>gi|303237347|ref|ZP_07323917.1| isoleucine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482734|gb|EFL45759.1| isoleucine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 1222

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 115/310 (37%), Gaps = 46/310 (14%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-------------------------- 254
                 ++ VW D+ +       Y    + SK                            
Sbjct: 665 MKREDDLIDVWFDSGSMPYAQLHYPFEGEISKEGLAKLGVKEEEYRQQLVASNYEGMAVP 724

Query: 255 --FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
             F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK +GNV
Sbjct: 725 PAFYPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVGNV 784

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
            +P E++E+ G D +R++++       +  +D +G+ +         + N  S     + 
Sbjct: 785 TNPFEMMEKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFA--LY 841

Query: 371 KDYDGMIPTP-------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            + D                TE D  I+S  + +++++   ++N    RA   + + V++
Sbjct: 842 ANVDKYEAKELGENTLTDDTTEIDRWIISKLNSLIKKVTAELENYDPTRAGRLIDNFVND 901

Query: 424 --VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              + Y   + ++ W  + ++  R  +        +  +A L+    P  A++++  L  
Sbjct: 902 DLSNWYVRLNRKRFWGKEMSSDKR--SAYDALYTCLMTVAKLMAPLTPFYADELYHDLGG 959

Query: 480 ADENRCFQSL 489
             E+   +  
Sbjct: 960 KLESVHLEKW 969



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 62/218 (28%), Gaps = 31/218 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMQGFQVHRKAGWDTHGLPVELGVEK 100

Query: 65  A----------------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
                                      +  V + +  +R + + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKQSDKYISTEEYNHKCRENVMKFTEEWRQLTEQMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------YYNAQ 153
           ++ +T   L K++ +KG +YKG     YS       +  E+ +    +         +  
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQPGCYRDVKDTTATVHFA 220

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            N   W          +    K      +   + LP  
Sbjct: 221 INETDWAAFCNKHNVKTNNWGKSSFLAWTTTPWTLPSN 258


>gi|268680239|ref|YP_003304670.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618270|gb|ACZ12635.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 815

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI +   YP+ + H+GH     I D +AR HR +G +VL   G D  G     AA
Sbjct: 29  SKAKKYILSMFPYPSGRIHMGHVRNYTIGDAIARHHRKNGFNVLHPIGWDSFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  K +  +N    R     L +S+        ++  +    + ++ ++ +KG +Y
Sbjct: 89  IKHGVHPKKWTYENIDYMRKELASLGLSFSKKREFAASDVLYTKHEQRIFIEMFNKGLVY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +    +    +++V +G          NPV+     GY+ +++ Y  +LL   
Sbjct: 149 QKSATLNWCNTCQTVLANEQVEEG----CCWRCDNPVEQRLLPGYYLKITQYAQELLDDC 204

Query: 181 ES-HPEFILPIERRNEVISFVKSGL 204
           E     +   +    E       GL
Sbjct: 205 EKLKAGWPNQVLTMQENWIGRSEGL 229



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 41/261 (15%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF--------LLS 281
           W         +       D   A +W   D ++ G +    H +Y   F         ++
Sbjct: 505 WYFLRYTTDPSLWNDVPFDKESANYWMNVDQYIGGIEHAILHLLYARFFTKVLRDLGYVN 564

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    + + G +L  G K+SKS GN +DP  +I+  G D  R F++      K+  +
Sbjct: 565 TDEPFA-NLLTQGMVLKDGSKMSKSKGNTVDPDAIIKTYGADTARLFILFAAPPQKELEW 623

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM---IPTPGAFTESDESILSVCSRVL 398
           +   ++         G    + R        +             ++  +         L
Sbjct: 624 NDSAVE---------GAFRFLKRFAQKSENAFTCKKIPDINHATLSKESKYARKKVYEAL 674

Query: 399 QEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++  E  +     +  +A  +  ++ +               +    + V      V+  
Sbjct: 675 KKSNEIFEGGYTFNTLIAACMEALNAL---------------SDQNDANVWSEGYFVLLN 719

Query: 458 LAILLQAFVPKLANKIFDILF 478
           +   L+  +P +  ++ + LF
Sbjct: 720 V---LEPIIPHVCWEMSETLF 737


>gi|317131331|ref|YP_004090645.1| leucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469310|gb|ADU25914.1| leucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 800

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K Y      YP+ Q  H+GH       D+++R  RL+G +VL+  G D  G      A 
Sbjct: 31  PKFYALVEFPYPSGQGLHVGHPRSYTALDIVSRKRRLEGYNVLYPMGWDAFGLPTENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  ++    N  +F+     L +S+D    I TT+  ++   + ++ ++  KG  YK
Sbjct: 91  KNHIHPEIVTKNNVAHFKQQLQSLGLSFDWSREINTTDPLYYRWTQWIFLQLFKKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    ++EV  G          + V    +  +  +++ Y  +L+   +
Sbjct: 151 KEMRVNWCTSCKCVLANEEVVNG----VCERCGSEVVHKVKSQWMLKITDYAQRLIDDLD 206

Query: 182 SHPEFILPIERRNEVI 197
                     ++   I
Sbjct: 207 GLDYIERVKTQQKNWI 222



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 115/353 (32%), Gaps = 64/353 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+ + E+ G+                      LP     E     +S
Sbjct: 418 WVFSRQRYWGEPIPLVYCEKCGWVPVPED-----------QLPLRLPEVASYEPTDNGES 466

Query: 203 GLKDL--SLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW- 256
            L  +   ++      G     +    M  W         Y               ++W 
Sbjct: 467 PLAAMTDWVNTVCPHCGGPARRETD-TMPQWAGSSWYFLRYTDPHNGKALASPEALRYWL 525

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D +  G +    H +Y   +         +  + P  K+      +   GEK+SKS G
Sbjct: 526 PVDWYNGGMEHTTLHLLYSRFWHKALFDLGIVPTSEPYQKRTSHGMILGENGEKMSKSRG 585

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV++P E+++  G D LR + +      K   +   G++              + R  ++
Sbjct: 586 NVVNPDEMVKAYGADTLRLYEMFIGDFEKAAPWSDTGIRGS---------KRFLERVWNL 636

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             K   G    P         + S   + ++++  ++++   + A+A +++L   ++R+ 
Sbjct: 637 QEKLLPGDGYRP--------ELESDLHKTIKKVTGDIESMKFNTAIAALMTL---LNRF- 684

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                    K    R            R   +LL  F P +  +++++  +  
Sbjct: 685 --------AKEGASRGE---------WRTFLLLLNPFAPHITEELWEVTGLGG 720


>gi|317403334|gb|EFV83847.1| ValS protein [Achromobacter xylosoxidans C54]
          Length = 964

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 76/520 (14%), Positives = 147/520 (28%), Gaps = 88/520 (16%)

Query: 36  RFHRLDGLDVLFTTGT-------DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  L G +V             D+                  F D       D+  ++ 
Sbjct: 269 RYKHLVGKEVELPLCDRNIPIIADDFVDPEFGTGCVKITGAHDFNDYACAMRHDLPLIVI 328

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            + D  I     +          + +    +    Y              D      +  
Sbjct: 329 FTLDAHINENGPKQFQGMERYEARKAVVAQLEAEGYLVKVEPHKMMQPKGDRTGVVLEPM 388

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +     +     EG      +  +  L           P        +   + ++D  
Sbjct: 389 LTDQWFVAMSKPAPEGTLNPGKSITEVALEVVADGRIQFYPDNWTTI-YNQWLNNIQDWC 447

Query: 209 LSRKTFDWGIKIP--------------------------------DDPQYIMYVWIDALT 236
           +SR+   WG +IP                                 DP  ++  W  +  
Sbjct: 448 ISRQ-LWWGHQIPAWYSDDGQVFVAHDEAEAVQQARAAGVTGELKRDPD-VLDTWFSSGL 505

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              TT G+ D      A++ P+ + V G DI+ F    +      L+  +P         
Sbjct: 506 VPFTTLGWPDKTA-DLARYLPSSVLVTGFDIIFFWVARMVMLTTHLTGQIPFKHVYVHGL 564

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
                G+K+SKS GN +DP+++I+                                    
Sbjct: 565 IRDADGQKMSKSKGNTLDPVDLIDGIDLDGLVAKRTYGLMNPKQAGAIEKATRRQYPDGI 624

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G DALR+ +      G++  +D    +     +  N + N  +R V M  + +D   
Sbjct: 625 PAFGTDALRFTMAAYATLGRNINFDLKRCEG--YRNFCNKLWN-ATRFVLMNTEGHDLTG 681

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
           P  G  +  D  I+S    +  ++     +         +   V +   D Y +  K   
Sbjct: 682 PDAGETSFVDRWIVSQLQALEADVARGFADYRFDNVANALYRYVWDEYCDWYLELAKVQI 741

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              T   +  T     + V+  +  L    +P +  +++ 
Sbjct: 742 QTGTPAQQLGT-RRTLIRVLEGVLRLAHPIIPFITEELWQ 780



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I           H+GHA+   I D L R+HR+ G D +F  GTD  G      
Sbjct: 52  TEGQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLIRYHRMLGDDTVFIPGTDHAGIATQIV 111

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +++          L  S D      T + R  
Sbjct: 112 VERQLDAQKVSRHDLGREKFVEKVWEWKEKSGNAITGQVRRLGASADWPREYFTMDDRMS 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                 + ++  +G IY+G     +  +     +D EV       +      P
Sbjct: 172 RGVVETFVRLHKQGLIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYP 224


>gi|27468349|ref|NP_764986.1| leucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251811139|ref|ZP_04825612.1| leucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|293366301|ref|ZP_06612981.1| leucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315895|gb|AAO05030.1|AE016748_264 leucyl-rRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251805359|gb|EES58016.1| leucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|291319539|gb|EFE59905.1| leucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 814

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 39  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 99  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 159 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 214

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 215 LDELDWPESIKDMQRNWIGRSE 236



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 501 PQWAGSCW--YYLRYIDPHNEKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 558

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 559 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGP 618

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   +I+   D           ++ S+  V 
Sbjct: 619 LDAAIAWSEKGL---------DGSRRFLDRVWRLII--TDENSINKKIVDSNNHSLDKVY 667

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  ++E  +  +  KP+                    
Sbjct: 668 NQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEVYKPY-------------------- 707

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++D L   +    + + + D+ L
Sbjct: 708 IEGFVKMLSPIAPHIGEELWDRLGHENTITYQPWPTFDESL 748


>gi|295706932|ref|YP_003600007.1| leucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804591|gb|ADF41657.1| leucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 804

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 91/254 (35%), Gaps = 16/254 (6%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  EGKRKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F + N  NFR     L  SYD    I TT+  ++   + ++ ++   G 
Sbjct: 88  YALDTGNDPAEFTELNINNFRRQIKSLGFSYDWEREINTTDPNYYKWTQWIFLQLYKNGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +             E I  ++      S       + I   +D   +     D L   
Sbjct: 204 DLD--------ELDWPESIKEMQRNWIGRSEGAH-VHFTIDGYEDTFTVFTTRPDTLFGA 254

Query: 239 LTTTGYLDNPDGSK 252
                  ++P   K
Sbjct: 255 TYAVLAPEHPFVEK 268



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/428 (14%), Positives = 134/428 (31%), Gaps = 64/428 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++        I +    GD+ K  Y+G     +  + N  +  +         Q 
Sbjct: 341 HDERDYEFAVKFELPIKEVVAGGDVSKEAYTGDGEHVNSDFLNGLDKEEAISNMIQWLQA 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N             + F    Y  + +            +      +   K+     S +
Sbjct: 401 NEKGEKQVTYRLRDWLFSRQRYWGEPIPVIHWEDGTTTAVPEDQLPLVLPKTTEIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDDWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPTNSEALADADKLKE 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P E++E  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDEIVESHGADTLRLYEMFMGPLDASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +++ D   +          D ++  V  + ++++ E+ +    +  ++Q++  +++  +
Sbjct: 632 RLLVDDNGELSSKVQESN--DTTLERVYHQTVKKVTEDYEGLRFNTGISQLMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--R 484
                               V  +  + +     LL    P    +++  L   D     
Sbjct: 690 --------------------VDVLPKQYVEGFVKLLAPICPHTTEELWSKLGHEDTISYE 729

Query: 485 CFQSLDQR 492
            + + D+ 
Sbjct: 730 AWPAFDEA 737


>gi|57167974|ref|ZP_00367113.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020348|gb|EAL57017.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 810

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKIGYNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKNELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L     
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLSELEN 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPSQVLTMQENWIGKSEGL 229



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 101/290 (34%), Gaps = 44/290 (15%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA------KFW-P 257
             +  +      G +   +    +  + +  + Y       +     KA      K+W  
Sbjct: 471 HPIWKNCTCPKCGQEAQKESD-TLDTFFE-SSWYFARFASDEKTWQEKALDKESVKYWMN 528

Query: 258 ADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            D ++ G +    H +Y   F         L  N P   ++ + G +L  G K+SKS GN
Sbjct: 529 VDQYIGGIEHAILHLLYARFFQKVLKDLGYLEDNEPFA-RLLTQGMVLKDGAKMSKSKGN 587

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+DP ++I + G D  R F++      K+  ++ D ++          I  L  R+    
Sbjct: 588 VVDPDDIINKYGADTARLFILFAAPPAKELEWNDDAVEGA-----YRFICRLYDRA--QN 640

Query: 370 LKDYDGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           ++  + +        + ++   L V   + +      Q+   +  +A  +  ++      
Sbjct: 641 VRAGELLEFKHDDLNKEEKYARLKVYEALKKSFEVYTQSFAFNTLIAACMEALNA----- 695

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  L     +          E    +  +L+  +P +  ++ D LF
Sbjct: 696 -------LAPCKNEALEQ------EAFYIILNILEPIIPHVCFELSDKLF 732


>gi|305431875|ref|ZP_07401042.1| leucine--tRNA ligase [Campylobacter coli JV20]
 gi|304444959|gb|EFM37605.1| leucine--tRNA ligase [Campylobacter coli JV20]
          Length = 810

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D +AR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYSIGDAIARYYRKIGYNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    ++    L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKNELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L     
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLSELEN 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPSQVLTMQENWIGKSEGL 229



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 101/290 (34%), Gaps = 44/290 (15%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA------KFW-P 257
             +  +      G +   +    +  + +  + Y       +     KA      K+W  
Sbjct: 471 HPIWKNCTCPKCGQEAQKESD-TLDTFFE-SSWYFARFASDEKTWQEKALDKESVKYWMN 528

Query: 258 ADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            D ++ G +    H +Y   F         L  N P   ++ + G +L  G K+SKS GN
Sbjct: 529 VDQYIGGIEHAILHLLYARFFQKVLKDLGYLEDNEPFA-RLLTQGMVLKDGAKMSKSKGN 587

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V+DP ++I + G D  R F++      K+  ++ D ++          I  L  R+    
Sbjct: 588 VVDPDDIINKYGADTARLFILFAAPPVKELEWNDDAVEGA-----YRFICRLYDRA--QN 640

Query: 370 LKDYDGMIPTPGAFTESDESI-LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           ++  + +        + ++   L V   + +      Q+   +  +A  +  ++      
Sbjct: 641 VRAGELLEFKHDDLNKEEKYARLKVYEALKKSFEVYTQSFAFNTLIAACMEALNA----- 695

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  L     +          E    +  +L+  +P +  ++ D LF
Sbjct: 696 -------LAPCKNEALEQ------EAFYIILNILEPIIPHVCFELSDKLF 732


>gi|319651920|ref|ZP_08006043.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396412|gb|EFV77127.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 805

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KGKRKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F ++N   FR     L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTEKNINTFRRQIKALGFSYDWDREVNTTDPEYYKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYIDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMRQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLLDWPESLKDMQRNWIGRSE 226



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 41/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPKNSEALADPEKLKEWLPVDIYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P E++   G D LR + +    
Sbjct: 549 YDVGIVHTKEPFQKLFNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL         +G    + R   + +++   +        E   S+  V 
Sbjct: 609 LEASIAWSTNGL---------DGSRRFLDRIWRLFVEETGELSQGIQDIEEG-SSLEKVY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +    + A++Q++  ++E  +                 A  +     E 
Sbjct: 659 HQTVKKVTEDYEGLRFNTAISQMMVFINEAYK-----------------ADVLPKAFAEG 701

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
                 +L    P ++ +++  L   +
Sbjct: 702 F---VKMLSPIAPHMSEELWSKLGHGE 725


>gi|226311582|ref|YP_002771476.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782487|sp|C0ZB13|SYL_BREBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226094530|dbj|BAH42972.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 805

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 16/237 (6%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  EGKKKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F + N   FR     L  SY  D  I TT+  ++   + ++ K+ + G 
Sbjct: 88  YALDTGNDPAEFTEHNINTFRRQIKSLGFSYDWDREINTTDPHYYKWTQWIFTKLYEHGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY ++LL+
Sbjct: 148 AYIDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWVLKITAYAERLLA 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
             +             E I  ++      S   +   +GI+  D+   +     D L
Sbjct: 204 DLD--------ELDWPESIKEMQRNWIGRSEGAE-VTFGIEGHDESFTVFTTRPDTL 251



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/415 (13%), Positives = 131/415 (31%), Gaps = 61/415 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +      K++   GDI K  Y+G     +    +    +  + K  +    
Sbjct: 341 HDERDYEFAKTFDLPIKQVIAGGDISKEAYAGDGEHINSGMLDGLNKEQAISKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             + N         + F    Y  + +         +  +      I   K+     S +
Sbjct: 401 EGKGNRKVTYRLRDWLFSRQRYWGEPIPILHLEDGTMKVVPESELPIMLPKTKEIKPSGT 460

Query: 211 RKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDG------------SKAKF 255
            ++    I       DP+  M    +  T                           K K 
Sbjct: 461 GESPLANIAEWVNTIDPETGMKARRETNTMPQWAGSCWYFLRFIDPHNDKALADPDKLKE 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPIDIYIGGAEHAVLHLLYSRFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P ++I+  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDDIIDSHGADTLRMYEMFMGPLDASIAWSTKGL---------DGARRFLDRVY 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + D   +       +     +  V  + ++++ E+ +    +  ++Q++  V+E  +
Sbjct: 632 RLFVGDNGELNEKIVETSNV-AGMERVYHQTVKKVTEDYEGLRFNTGISQLMVFVNEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                                  +  + +     +L    P L  ++++ L  ++
Sbjct: 691 --------------------AEVLPKKFMEDFVKMLSPIAPHLGEELWEKLGHSE 725


>gi|189195432|ref|XP_001934054.1| leucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979933|gb|EDU46559.1| leucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 941

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 82/228 (35%), Gaps = 5/228 (2%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+   H+GH     I+DVLARF  + G  VL   G D  G     AA   GV  + 
Sbjct: 1   MFPYPSGTLHLGHLRVYTISDVLARFKHMQGYKVLHPIGWDAFGLPAENAAIERGVHPEK 60

Query: 72  FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +  QN    +     +     +D  IRT +   +   + ++  +   G  Y+      Y 
Sbjct: 61  WTLQNIEAMKAQMKEMGGRWDWDAEIRTCDPDFYKHTQRIFLMLHQHGLAYQAESLVNYD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D+    +++V             + V+ +  + +F ++  +Q+ LL   ++       
Sbjct: 121 PIDQTVLANEQVDAN---GCSWRSGSKVEKVMLKQWFLKIKEFQEPLLKDLDALARDGRW 177

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            E+   +        +   LS         +  +P ++     D L  
Sbjct: 178 PEKVLSMQRNWIGKSEGAKLSFDFVSMDSSMRFEPVHVFTTRPDTLFG 225



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 92/297 (30%), Gaps = 87/297 (29%)

Query: 257 PADLHVIGKDILRFHAIY-------------WPAFLLSANLPL----------------- 286
           P DL+V G +    H +Y             WP   L++  P                  
Sbjct: 508 PVDLYVGGVEHAILHLLYARFISKFLATTPTWPKGYLTSGEPFTRLIAQGMVHGETFTDP 567

Query: 287 -------PKKVF-----------SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                  P +V            +        EK+SKS  N IDP   I + G DA R  
Sbjct: 568 ESGRFLRPDEVNLSNPSKPLIKATGSTPNVSYEKMSKSKYNGIDPGTTIAKYGADATRAH 627

Query: 329 LVREIACGKDGFYDKDGL--KKRVNADLANGIGNLV------------SRSVSMILKDYD 374
           ++ +   G    +D+  +   +R    +                    ++  + IL+   
Sbjct: 628 MLFQAPVGDVLEWDEKKITGVERWLNRVIRLSDAFWLPDVEAKRFTIPTQVDATILEIIQ 687

Query: 375 GMIPTPGAFTESDESILSVC-----------SRVLQEIRENMQN-QLIHRALAQVISLVS 422
            + P   A   + E ++S+             +++  + E+      ++  ++ +++L +
Sbjct: 688 TLFPKESATHHTREQLISLLKPDEAKLWIKTQQIIASVTESYSQTYSLNTIVSDLMTLTN 747

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            V         W      P  +          +  L  +L    P +A + +  L +
Sbjct: 748 AV---------W----DTPHVSGKTPTFKWYSVAHLVRMLAPIAPGVAEEAWYRLHM 791


>gi|160895368|ref|ZP_02076139.1| hypothetical protein CLOL250_02927 [Clostridium sp. L2-50]
 gi|156863061|gb|EDO56492.1| hypothetical protein CLOL250_02927 [Clostridium sp. L2-50]
          Length = 805

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 16/255 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      
Sbjct: 31  SKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K     N   F+     L  S+  D  I TT+  ++   + ++ K+   G  
Sbjct: 91  AIKNKIHPKEVTKNNVARFKAQLHSLGYSFDWDREINTTDPEYYKWTQWIFLKLFKAGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV  G           PV    +  +  +++ Y DKL+  
Sbjct: 151 YKKEMPINWCTSCKVGLANEEVVNG----VCERCGAPVVRKVKSEWMLKITEYADKLIEG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            ++          +   I            +    D+ IK  +D   I     D L    
Sbjct: 207 LDTVDYIERVKVSQKNWIG---------RSTGAEVDFRIKGKEDKLRIYTTRCDTLFGAT 257

Query: 240 TTTGYLDNPDGSKAK 254
                 ++P   K K
Sbjct: 258 YMVVSPEHPLLDKYK 272



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 116/369 (31%), Gaps = 63/369 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILP--------IERRNEVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P        +    E      +G   L+   
Sbjct: 420 YKLRDWVFSRQRYWGEPIPIIHCDKCGYVPLNESELPLMLPEVESYMPTDNGESPLAAMT 479

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y               K+W P D +  
Sbjct: 480 DWVNVKCPCCGGPAKRETDTMPQWAGSSWYFLRYTDPKNTEALASKEALKYWLPVDWYNG 539

Query: 264 GKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +              P  K+      +   GEK+SKS GNV++P +
Sbjct: 540 GMEHTTLHLLYSRFWHKFLYDQGVVPTPEPYQKRTSHGMILGENGEKMSKSRGNVVNPDD 599

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++   G D LR + +   A      +  DG+K         G    + R   +       
Sbjct: 600 IVNAYGADTLRTYEMFIGAFDLAASWSDDGVK---------GCRRFLERVWKL-----QD 645

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           ++    A++   + + +   + ++++  + +N   + A+A +++LV+      D  K   
Sbjct: 646 IVVDGDAYS---KDMETKMHQTIKKVSTDFENLKYNTAIAAMMALVN------DFYKKNA 696

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           + K                ++ L  LL    P +  +++ IL    E   +Q+       
Sbjct: 697 VTKGE--------------MKTLLTLLNPVAPHITEEMWSILGY--EGYLYQASWPTFDE 740

Query: 496 GFMLHKTFD 504
              +  T +
Sbjct: 741 AKTVESTVE 749


>gi|87311784|ref|ZP_01093898.1| probable isoleucyl-tRNA synthetase [Blastopirellula marina DSM
           3645]
 gi|87285458|gb|EAQ77378.1| probable isoleucyl-tRNA synthetase [Blastopirellula marina DSM
           3645]
          Length = 1122

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 100/300 (33%), Gaps = 38/300 (12%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN- 283
           ++  W D+        GY         + +PAD      D     F++    + LL    
Sbjct: 560 VIDCWFDSGAMPFAQWGYPHQNADRFEEQFPADFISEAIDQTRGWFYSQLAISTLLFGKG 619

Query: 284 -----------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
                       P    +     +   G+K+SKS  N  +P E+ ++ G DALR++L   
Sbjct: 620 GDGQTVRHEYPHPFKNCIVLGLMLGEDGQKMSKSKRNYREPNEIFDKYGADALRWYLFAN 679

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----------- 381
                   Y++  +K  +   L          ++   +  +       G           
Sbjct: 680 QPPWTSIRYNEQSIKDSIPEFLLRLWNVYSFFTIYANIDGFQPEQALTGQAGQLSGADFA 739

Query: 382 ---------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQ 431
                      +E D  +LS  ++ +  + E M     + A   + + V  + + Y    
Sbjct: 740 GAKGYRPAAERSELDRWVLSELNQAIATVVERMDAYDNYGACGALTNFVDALSNWYVRRS 799

Query: 432 KP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +   W   K +P++     +   E +     L+  F P LA  ++  L     +R  +S+
Sbjct: 800 RDRFWSGDKESPEK-QDAYWTLYECLITTCKLIAPFTPFLAEGLWRSLAGVFGDRAIESV 858



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 71/236 (30%), Gaps = 42/236 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  K          N  PH GH     I DV  R+  + G       G D HG  +   
Sbjct: 36  RDGPKFVFYEGPPTANGMPHPGHCLTRAIKDVFPRYRTMKGYYCERKAGWDTHGLPVEV- 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                        +   + ++  +   I         E   H     +W+ + +   + +
Sbjct: 95  ---------EVCKEMGIHSKEEIENFGI---------EPFIHKCQASVWRYMQEWERLTE 136

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               G++   DEAY              Y+  +    W   + ++ R   YQ   + ++ 
Sbjct: 137 R--LGFWLKLDEAYVT------------YHQSYVESVWWALKNFYDRGLLYQGHKIVWWW 182

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
           +              +S  + G     ++  +      + +DP+  + VW      
Sbjct: 183 AQG---------GTALSAGEVGQGYREVADPSVYVRFPLVEDPKTALLVWTTTPWT 229


>gi|294501584|ref|YP_003565284.1| leucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351521|gb|ADE71850.1| leucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 804

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 16/254 (6%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  EGKRKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F + N  NFR     L  SYD    I TT+  ++   + ++ ++  KG 
Sbjct: 88  YALDTGNDPAEFTELNINNFRRQIKSLGFSYDWEREINTTDPNYYKWTQWIFLQLYKKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             +             E I  ++      S       + I   DD   +     D L   
Sbjct: 204 DLD--------ELDWPESIKEMQRNWIGRSEGAH-VHFTIDGYDDTFTVFTTRPDTLFGA 254

Query: 239 LTTTGYLDNPDGSK 252
                  ++P   K
Sbjct: 255 TYAVLAPEHPFVEK 268



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/428 (14%), Positives = 134/428 (31%), Gaps = 64/428 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++        I +    GD+ K  Y+G     +  + N  +  +         Q 
Sbjct: 341 HDERDYEFAVKFELPIKEVVAGGDVSKEAYTGDGEHVNSDFLNGLDKEEAISNMIQWLQA 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N             + F    Y  + +            +      +   K+     S +
Sbjct: 401 NEKGEKQVTYRLRDWLFSRQRYWGEPIPVIHWEDGTTTAVPEDQLPLVLPKTTEIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDDWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPTNSEALADADKLKE 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P E++E  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDEIVESHGADTLRLYEMFMGPLDASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +++ D   +          D ++  V  + ++++ E+ +    +  ++Q++  +++  +
Sbjct: 632 RLLVDDNGELSSKVQESN--DTTLERVYHQTVKKVTEDYEGLRFNTGISQLMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--R 484
                               V  +  + +     LL    P    +++  L   D     
Sbjct: 690 --------------------VDVLPKQYVEGFVKLLAPICPHTTEELWSKLGHEDTISYE 729

Query: 485 CFQSLDQR 492
            + + D+ 
Sbjct: 730 AWPAFDEA 737


>gi|291059838|gb|ADD72573.1| isoleucine--tRNA ligase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 1184

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/416 (13%), Positives = 124/416 (29%), Gaps = 36/416 (8%)

Query: 96  RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           R      +      +  +    D               +RD  +       +        
Sbjct: 521 RCASPLIYRAVHSWFVAVEKIKDKMLAANASICWQPSHIRDGRFGKWLVCARDWAISRDR 580

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              NP+                        S  +         E +      +  +  + 
Sbjct: 581 YWGNPLPIWRCVHCG---------ATDCIGSRTQLYERSGMLLEDLHKHVVDMVTIPCAC 631

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            +    +        ++  W ++         Y         +++PA     G D     
Sbjct: 632 GSVMRRVP------EVLDCWFESGAMPYAQQHYPFEHATDFERYFPAHFISEGLDQTRGW 685

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   A  L         + +   +   G+K+SK+L N  DP EV++  G DALR FL
Sbjct: 686 FYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRNYADPNEVMDRYGADALRLFL 745

Query: 330 VREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA------ 382
           VR       D  Y  +G+K  +   +     +         +   D  +           
Sbjct: 746 VRSAVVRADDLKYSDEGVKDILKTVIIPLWNSYSFYVTYANIDGIDPPVCAKVDGMGQAV 805

Query: 383 -------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                      D  ILS+  +++Q+I   +    + +    ++S V +++ ++  +    
Sbjct: 806 TRLATHLNNPLDRWILSLTEKLVQDIACALDAYDVSKVADPIVSYVDQLNNWYIRRSRRR 865

Query: 436 LKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             K+ N +           V+++  + +   VP +   I+  +  AD+ +     D
Sbjct: 866 FWKSINDEDKRCAYNTLYCVLKRCVLAIAPVVPFITESIWQNIRAADDVQSVHLAD 921



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 53/159 (33%), Gaps = 19/159 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +         +    PH GH     I D++ R+  + G  V    G D HG  I    + 
Sbjct: 132 KSYVFFDGPPFATGLPHFGHFVPSTIKDIIPRYQTMRGAYVPRRFGWDCHGLPIEHLIEQ 191

Query: 65  AGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 +  V +  + ++     L   + +D+  +T +  + ++
Sbjct: 192 ELNLNSKSDVESYGVSAFNAACRSSVLRYVKEWQRTLTRLGRWVDFDNDYKTMDVCYMES 251

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
              +  ++  +  +Y+G     Y  R     ++ E+  G
Sbjct: 252 VWWVVAQLWQRKLLYEGYKILPYCPRCATALSNHELNLG 290


>gi|149198549|ref|ZP_01875593.1| leucyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138264|gb|EDM26673.1| leucyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 873

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 8/199 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+    H+GH      +D++ R+ R  G +VL   G D  G    +
Sbjct: 33  ETKPKFYALDMFPYPSGSGLHVGHPEGYTASDIICRYKRQKGFNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV   +  ++N  NFR     L  SY  D  I TT+++++   + ++ ++  KG 
Sbjct: 93  YAMKTGVHPSITTEKNVDNFRRQIQELGFSYDWDREINTTDEKYYKWTQWIFLQLYKKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                    +         ++EV  G D      + N V+    + + F+++ Y ++LL 
Sbjct: 153 AKIDNVDVNWCPTTRTVLANEEVNNGMD-----EKGNAVERKPMKQWVFKITEYAEQLLE 207

Query: 179 YYESHPEFILPIERRNEVI 197
             +         E +   I
Sbjct: 208 GLDDLDWPEGIKEMQRNWI 226



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 74/180 (41%), Gaps = 29/180 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV++P ++++E G D+LR + +   A      +    +         NGI   
Sbjct: 643 KMSKSLSNVVNPDDIVKEFGADSLRLYEMFMGALADSKLWITSSI---------NGINKF 693

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           ++R   +++     +  +     E  E         ++++ E++++   + A++Q++  +
Sbjct: 694 LTRCHKLVVDKNGELNSSISDDAELSEDSRRTLHATIKKVGEDIESFGFNTAISQMMIFI 753

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +E  +                    +    +E       +L  F P LA ++++ L   +
Sbjct: 754 NEFSK-----------------LKAIPKSAIE---DFVTILSPFAPHLAEELWEKLGHTE 793


>gi|258646150|ref|ZP_05733619.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403533|gb|EEW97080.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 951

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 106/292 (36%), Gaps = 11/292 (3%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            +     + L    K    G       + IM VW D+ + +                 +P
Sbjct: 514 WWAHPAEELLPKDFKCPHCGGSRFHQEKDIMDVWFDSGSTWNGVLKDPHPVWKETGAAYP 573

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            DL++ G D     FH+    +  ++   P    +     +  +G K+SKS+GNV+ P +
Sbjct: 574 CDLYLEGSDQHRGWFHSSLLTSVAVNGCAPYKAVLTHGFTMDGEGRKMSKSVGNVVAPQD 633

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I++ G D +R ++   +    D       +K    +D+   I N   R +   L D+D 
Sbjct: 634 IIDKYGADVMRLWI-SSVDYQGDVRLSDKIVKS--MSDVYRKIRNTF-RYLLGNLYDFDP 689

Query: 376 MIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQ 431
                  G   E D   L    +V + + +  ++   H     V +   V     Y D  
Sbjct: 690 KTDSVAYGDMEELDRWALLRLEQVKRTVLKAYEDYEFHVMYHAVHNFCTVDLSSIYLDIL 749

Query: 432 KPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           K     +K +     +      E++  L  L+   +   A +++  L   +E
Sbjct: 750 KDRLYTEKDDSLLRRSAQTAMYEILTSLVRLVAPVICFTAEEVWQALPNREE 801



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
            +  +     Y N + HIGHA    + D++ R+  + G    +  G D HG  I      
Sbjct: 50  PRFVLHDGPPYANGKIHIGHALNKTLKDIIVRYKYMAGYMANYIPGWDTHGLPIEYAVLK 109

Query: 60  --------KAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                    +          +  +     +     + +   +D+   T +         +
Sbjct: 110 DSGEDRANMSVLELRRKCLEYAKKWIEIQKTDFIRMGVIGDFDNRYVTFDPHLEAKEIEV 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +++ KG IYKG  + ++    E    + E+  
Sbjct: 170 FGEMARKGYIYKGKKAVYWCSHCETALAEAEIEY 203


>gi|307720508|ref|YP_003891648.1| leucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978601|gb|ADN08636.1| leucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 823

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK YI +   +P+ + H+GH     I+D  AR+HR  G +VL   G D  G     AA
Sbjct: 29  TKEKKYILSMFPFPSGRLHMGHVRNYSISDAFARYHRQQGKNVLHPIGFDSFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N    ++    L  S+       T+++ +    +     + +KG +Y
Sbjct: 89  IKNGSHPKSWTYDNIDYMKNEFYSLGFSFSRKREFATSDELYTKFEQGFIIDMYNKGLLY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G           P+   +   Y+F+++AY D+LL   
Sbjct: 149 REKGMLNWCPHDQTVLANEQVVDG----CCWRCDTPIVKKDMNQYYFKITAYADELLEDL 204

Query: 181 ES-HPEFILPIERRNEVISFVKSGL 204
           +     +   +    E      +GL
Sbjct: 205 KKLENGWPKQVLTMQENWIGKSNGL 229



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 88/252 (34%), Gaps = 39/252 (15%)

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLSA 282
           W     +      ++             D ++ G +    H +Y   F         +  
Sbjct: 518 WEKEAFSPEQIKYWMHPKGHEG-----VDHYIGGIEHAILHLLYARFFTKVFRDLGYVDF 572

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  +++ + G +L  G K+SKS GN +DP  +IE+ G D  R F++      ++  ++
Sbjct: 573 DEPF-ERLLTQGMVLKDGAKMSKSKGNTVDPDAIIEKYGADTARLFILFAAPPTQELEWN 631

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
              ++          I     RS +++  + +         ++ ++         L+   
Sbjct: 632 DSAVEGA-----YKFIKRFFERSTNVLTCN-EKPQINHADLSKEEKFARKKVYEALKRAE 685

Query: 403 ENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +   +    +  +A V+  ++ ++                  A +   V  E    L+ +
Sbjct: 686 DVYNERYTFNTMIAGVMEAMNALN------------------AQSNADVWSEGYWILSSI 727

Query: 462 LQAFVPKLANKI 473
           ++  +P    +I
Sbjct: 728 MEPVIPHTCYEI 739


>gi|328772617|gb|EGF82655.1| hypothetical protein BATDEDRAFT_34367 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1048

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 78/402 (19%), Positives = 128/402 (31%), Gaps = 61/402 (15%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           + + N  E+   A     N        + E  +F  L   QD  +S        +     
Sbjct: 462 QWWVNCQEMAGQAMDAVRNGDMKIAPALSEREWFRWLDNIQDWCISRQLWWGHRVPAYFV 521

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-------------PQYIMYVWIDALTNYL 239
             +     +         R   +  IK                  + ++  W  +     
Sbjct: 522 CIDGDENDRDDSNRWVSGRSEDEARIKAIKKFETVDPAKITLFQDEDVLDTWFSSGLWPF 581

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH 298
           +  G+          ++P  L   G DIL F         L  N  +P K+VF H  I  
Sbjct: 582 SIMGWPAKTK-DMELYFPNTLLETGWDILFFWVARMVMMSLKFNGVVPFKQVFCHAMIRD 640

Query: 299 -KGEKISKSLGNVIDPIEVI-------------------------------------EEV 320
             G K+SKSLGNVIDPI+VI                                      E 
Sbjct: 641 AHGRKMSKSLGNVIDPIDVIEGVTLQLLQERLEKGNLDPRELVRARDGQKKDFPNGIPEC 700

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MI 377
           G DALR+ L+   A G+D   + D L+        N + N    ++  + +DY       
Sbjct: 701 GTDALRFGLLAYSASGRDI--NLDILRVDGYRKFCNKLWNATRFALLKLGEDYKPRATHN 758

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWE 435
              G  +  D  IL+  ++ + E   +M+     +A   +         D Y +  KP  
Sbjct: 759 QLTGKESVVDLWILAKLNKAIAETNTSMEQMNFMQATTGMYQFWLHELCDVYLEVCKP-V 817

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +   +         V    + Q   LL   +P +  +++  L
Sbjct: 818 IDGEDIQAKEAAQDVLYICLEQGLKLLHPVMPFVTEELYQRL 859



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+     +           HIGHA    I D + R++R+ G   L+  G D  G      
Sbjct: 117 KDEGTFVVPIPPPNVTGSLHIGHALTNAIQDAMIRWNRMQGKTTLWVPGADHAGISTQVV 176

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + D N  N  +    +  S+D      T +   
Sbjct: 177 VEKKIMRERGITRHQLGRDAFLEEVFKWKDVNIHNIYNQLRRMGSSFDWTRDHFTMDAGL 236

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +  +  + ++ + G IY+      +  +
Sbjct: 237 SNAVKEAFVQMHEDGTIYRANRLVNWCTK 265


>gi|242309306|ref|ZP_04808461.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524347|gb|EEQ64213.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 812

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K   K YI +   YP+   H+GH     I+D +AR +R  G +VL   G D  G     A
Sbjct: 28  KNLPKKYILSMFPYPSGNIHMGHVRNYCISDAIARNYRKQGFNVLHPIGWDAFGMPAENA 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N  N ++    L  S+     + T +  +    + L+  + +KG I
Sbjct: 88  AIKNKTHPKQWTYANIENMKNQLYSLGFSFSKTRELATCDLEYSKWEQSLFIDMWEKGLI 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +G            V   E   Y+ +++ Y ++LL  
Sbjct: 148 YRKKGYLNWCPNDQTVLANEQVIEGK----CWRCDTQVVQKEMYQYYIKITDYAEELLRD 203

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            ++   ++   +            GL
Sbjct: 204 LDTLEGKWPNQVLTMQRNWIGKSRGL 229



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 108/363 (29%), Gaps = 50/363 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY--YESHPEFILPIERRNEVISFV 200
            G   Q Y     P+   E+ G            L            L      +  +  
Sbjct: 419 WGVSRQRYWGTPIPLIHCEKCGILPENKDNLPVALPEDVVIDGEGNPLDKHSSWKHCTCP 478

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-AD 259
           K G K L  +               ++   W                      K+W   D
Sbjct: 479 KCGNKALRETDTL----------DTFVESSWYFLRYTTPKELRDKMLLSPEDEKYWMGVD 528

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F            + P    + + G +   G K+SKS GNV+
Sbjct: 529 EYIGGIEHAILHLLYSRFFTKVLRDLGYTKISEPFL-HLLTQGMVTKDGAKMSKSKGNVV 587

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E+IE+ G D  R F++      ++  ++   L+       A      +S  +    K
Sbjct: 588 DPQEIIEQYGADTARLFILFAAPPVRELEWNDSALEG------AFRFIKRLSAKIENASK 641

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENM---QNQLIHRALAQVISLVSEVDRYF 428
                       +++++         L++  E          +  +A  +  ++ +    
Sbjct: 642 MESLPQIDTKGLSKAEKYARKKVYEALKKSNETFIHENGFAFNTLIAACMEALNAL---- 697

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                      +      V      +   L  +L+  +P +  ++ +  +   EN  F S
Sbjct: 698 -----------SEQENQAVWSEGYFI---LLHILEPIIPHICWELSEQ-YFGLENFKFIS 742

Query: 489 LDQ 491
           +D 
Sbjct: 743 IDN 745


>gi|315928006|gb|EFV07326.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 516

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR++R  G +VL   G D  G     AA  
Sbjct: 31  PKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N    +     L  S+     + T++  +    +  + K+ +KG IY  
Sbjct: 91  HKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTK 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ-DKLLSYYE 181
             +  +  +D+    +++V  G          + V   +  GY+ +++AY  + L    E
Sbjct: 151 EANVNWCEQDQTVLANEQVEDGK----CWRCGHEVVQKKMPGYYVKITAYAEELLKDLEE 206

Query: 182 SHPEFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 207 LKDKWPNQVLTMQENWIGKSEGL 229


>gi|262340947|ref|YP_003283802.1| isoleucine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272284|gb|ACY40192.1| isoleucine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 1149

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 68/451 (15%), Positives = 148/451 (32%), Gaps = 15/451 (3%)

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
           QKI +  ++       +  +     + +      S+  FI+TTE+++         K   
Sbjct: 447 QKIFRKEKHIHFYPHCWRTE-----KPILYYPLNSW--FIKTTEEKNKMILLNQKIKWHP 499

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
           +    K   S   + +D                        +     +  F  +      
Sbjct: 500 EFTGIKRFDSWLKNTKDWNLSRSRYWGTPLPIWRTEKGDEEIVIGSIKELFMEIQKSIQH 559

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               Y    +F+L  +  N+  + +      L         G+ +  +   +  VW D+ 
Sbjct: 560 GFMSYNMFKDFLL-DDMSNDNYNKIDLHKHVLDEIILVSPKGVPMKRESDLV-DVWFDSG 617

Query: 236 TNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVF 291
                   Y         K   +P+DL   G D     F  ++  + +L  +      + 
Sbjct: 618 AMPYAQFHYPFENKEYIDKNLLFPSDLVSEGIDQTRGWFFTLHTISSILFHSTAYKNVIS 677

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   +   G K+SKS GN ++P ++I   G DA+R++++       +  ++ +G+   +N
Sbjct: 678 TGLVLDKNGHKMSKSKGNTLNPFDLINNYGPDAIRWYIIFNSEPWDNLKFNVEGIHTVIN 737

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                         +   +  +         +TE D  ILS    ++Q++     N    
Sbjct: 738 KFFGTLYNIYSFFVLYANIDGFSYKEEECFNYTELDFWILSELHSMIQKVDNYYSNYNPT 797

Query: 412 RALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +    + S V     + Y    +    K    +   +   V  + +  +A L    +P  
Sbjct: 798 KVARLISSFVLDKLSNWYIRLCRRRFWKDQYTENKISAYQVLYKCLITVAKLTSPIIPFF 857

Query: 470 ANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           + K++  L         +S+     P + L+
Sbjct: 858 SEKLYIDLNSITNQENRKSIHWTCFPNYDLN 888



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +       N +P I H     I D+  R+H L G  V    G D HG  +   
Sbjct: 41  EPKESFVLYEGPPSLNGKPGIHHILARTIKDIFCRYHTLKGKKVFRKAGWDTHGLPVELN 100

Query: 62  AQNAGVTT------KVFVDQNSRNFRDMADVLDISYDDFIR-------------TTEKRH 102
            +     T      K+ V + ++  +   D     +  FI              T   ++
Sbjct: 101 VEKKMGITKNDIGKKISVKEYNQFCKKFVDQSLKEWLFFIEKIGDWINLKDSFLTCNAKY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++   L KK+  K  IYK      YS       +  E+  
Sbjct: 161 IESVWWLIKKLYCKNLIYKDFSIQPYSPSAGTGLSHHELNM 201


>gi|323451382|gb|EGB07259.1| hypothetical protein AURANDRAFT_64933 [Aureococcus anophagefferens]
          Length = 859

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + REK Y+     YP+    H+GH       D+++R+ R+ G DVL   G D  G    +
Sbjct: 60  EGREKKYVLDMFPYPSGSGLHVGHPEGYTATDIMSRYWRMRGYDVLHPMGWDAFGLPAEQ 119

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A N G   +     N   F+     L +SY  D  + TT+  +    + ++ ++   G 
Sbjct: 120 HAINTGTHPRETTLTNIGTFKRQLKSLGLSYDWDRELSTTDPDYVRWTQWIFLQLFKVGL 179

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +      +         ++E+  G          +PV       +  +++ Y DKLL 
Sbjct: 180 AEQKEVPVNWCPALGTVLANEEIIDG----LSERGSHPVVRAPLRQWVLKITDYADKLLD 235

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +        +  + E I   +
Sbjct: 236 GLDDLDWPAGTLRSQREWIGRSE 258



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 48/270 (17%)

Query: 224 PQYIMYVWIDALTNYLTT----TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   Y+             D +   + P DL+V G +    H +Y   + 
Sbjct: 545 ETNTMPQWAGSCWYYMRYADNANDEKMIGDAADKSWLPVDLYVGGAEHAVLHLLYARFWH 604

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                    +   P  K V     +   GEK+SKS GNV++P EVI E G DALR + + 
Sbjct: 605 KVLYDIGATTHEEPFAKLVHQGLILGSDGEKMSKSRGNVVNPDEVIGEHGADALRLYEMF 664

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                           K       +G+     R        Y             D+   
Sbjct: 665 MGPL---------EAVKPWQTAQVSGVVRFRDRV-------YAACAKASADAPPLDQETD 708

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           ++  + ++++  ++     + A++ ++ L +                    + S +    
Sbjct: 709 ALLHKTMRKVTGDIDALGFNTAISALMVLAT--------------------KLSGLETPP 748

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +   +LA+++  F P L  + + +L  A+
Sbjct: 749 ADACEKLALMVSPFAPHLGEECWRLLGHAE 778


>gi|296270393|ref|YP_003653025.1| leucyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093180|gb|ADG89132.1| leucyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 820

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 13/234 (5%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R + Y+     YP+   H+GH     I DV+AR+    G +VL   G D  G     AA 
Sbjct: 35  RPRRYMLDMFPYPSGDLHMGHGEAFAIGDVVARYWFQKGYNVLHPIGWDSFGLPAENAAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N             S+D    + T++  ++   + L+ +  ++G  Y+
Sbjct: 95  KRNAHPAEWTYANIDTQARSFKQYATSFDWSRRLHTSDPEYYRWNQWLFLRFYERGLAYR 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +D+    +++V  G          + V   +   ++F+++ Y D+LL    
Sbjct: 155 KDGLVNWCPKDQTVLANEQVING----RCERCQSEVVRRKLTQWYFKITEYADRLL---- 206

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
              +      +  E +  ++      S +     + I+  ++P  +     D L
Sbjct: 207 --DDMKQLEGKWPERVLTMQRNWIGRS-TGADVQFKIEGREEPVTVFTTRPDTL 257



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 36/299 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            ++      G     D    M  ++D+      Y          +  K + W P D +V 
Sbjct: 481 WVNVDCPKCGGPAKRDTD-TMDTFVDSSWYFLRYCDPDYEDGPFNVEKVRTWCPVDQYVG 539

Query: 264 GKDILRFHAIY---WPAFLLSANL----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           G +    H +Y   +   L    L       +++ + G ++++G+ +SKSLGN +D  E 
Sbjct: 540 GVEHAVLHLLYSRFFTKVLYDMGLVDFTEPFQRLLNQGQVINQGKAMSKSLGNGVDLGEQ 599

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ GVDA+R  +V       D  +                    ++R++ ++ +     
Sbjct: 600 IEKYGVDAVRLTMVFAGPPEDDIDWADVSPAASQ---------KFLARALRVMTEAGAAS 650

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
            P    F++ D ++  V  RV+ E+ + ++    + A+A+++ L + + R  D       
Sbjct: 651 APGVD-FSKGDVALRKVTHRVIDEVTKLVEAYRFNVAVARMMELTTAIRRAID------- 702

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
             + P  A   +    E    LAI+L    P  A + ++ L          +   D +L
Sbjct: 703 --SGPGAADPAVR---EAAETLAIMLSLVAPYTAEEGWERLGHKPSVAKAGWPEADPQL 756


>gi|314936146|ref|ZP_07843493.1| leucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654765|gb|EFS18510.1| leucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 804

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDGLDWPESIKDMQRNWIGRSE 226



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 104/265 (39%), Gaps = 44/265 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNV++P +++   G D LR + +   
Sbjct: 549 YDLGVVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + +   +    +      +D S+  V
Sbjct: 608 PLDAAIAWSENGL---------DGSRRFLDRVWRLFIN--EDGSLSNKIVENNDNSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+      + A++Q++  +++  +  +  KP+                   
Sbjct: 657 YNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNIYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
            +     +L    P ++ +++  L 
Sbjct: 698 -VEGFVKMLAPIAPHVSEELWQRLG 721


>gi|228475879|ref|ZP_04060589.1| leucine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270034|gb|EEK11504.1| leucine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 804

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWPESIKDMQRNWIGRSE 226



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 107/278 (38%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYSRFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNV++P +++   G D LR + +   
Sbjct: 549 YDLGVVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVASHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + +   +    +      +D S+  V
Sbjct: 608 PLDAAIAWSENGL---------DGSRRFLDRVWRLFIN--EDGSLSNKIVENNDNSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+      + A++Q++  +++  +  +  KP+                   
Sbjct: 657 YNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNIYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +     +L    P ++ +++  L    E   +Q    
Sbjct: 698 -VEGFVKMLAPIAPHVSEELWQRLG-NKETITYQPWPT 733


>gi|170590117|ref|XP_001899819.1| protein ZK524.3 [Brugia malayi]
 gi|158592738|gb|EDP31335.1| protein ZK524.3, putative [Brugia malayi]
          Length = 878

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 75/207 (36%), Gaps = 5/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K YI +   YP+ + H+GH     I+DVLAR++RL+G +V+   G D  G     AA
Sbjct: 64  SRPKKYILSMYPYPSGRLHMGHMRVYTISDVLARYYRLNGYNVIHPIGWDAFGLPAENAA 123

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  GV    +   N    R       I +D    I T    ++   + ++ ++ ++G + 
Sbjct: 124 REVGVDPAQWTANNIDVMRQQLLSTGIIFDWNREISTCSPDYYRWTQWIFCRLFERGLVR 183

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D      +++          A     +  + + +      Y  ++    
Sbjct: 184 RALTEVHWDPIDCTVLAAEQIDAEGRSWRSGAVA---EKRKIKHWMIETPKYAKRMYVGL 240

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           E    +      +   I         L
Sbjct: 241 EKLAHWKEVAAIQANWIGKCDVWRFLL 267



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 28/191 (14%)

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  + EK+SKS  N +DP+ V++  G+D  R  L+ E A  +   +    LK     
Sbjct: 576 GCAVFTQFEKMSKSKHNGVDPLSVLKLKGIDLTRLQLLNEAAPREPINWGDTELK----- 630

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQN 407
               G+   + R+  +I    +    +     E      +E   ++ +  ++ I   ++ 
Sbjct: 631 ----GLFKFMERTSDVISFYVEQHALSASTLPEPLDIAREEKYRTIYNFYVRNISMVIEV 686

Query: 408 QLIH-RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +H  A+  + S V              LKK++ + A          +  L I++Q F 
Sbjct: 687 LHLHNTAIDHLQSFVKF------------LKKSSAE-AYRCSVQLERCVHALVIMMQLFT 733

Query: 467 PKLANKIFDIL 477
           P LA + +  L
Sbjct: 734 PHLAAEYWAAL 744


>gi|319401064|gb|EFV89283.1| leucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 804

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWPESIKDMQRNWIGRSE 226



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/281 (18%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNEKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   +I+   D           +D S+  V 
Sbjct: 609 LDAAIAWSEKGL---------DGSRRFLDRVWRLII--TDENSINKKIVDSNDHSLDKVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  ++E  +  +  KP+                    
Sbjct: 658 NQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEVYKPY-------------------- 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++D L   +    + + + D+ L
Sbjct: 698 IEGFVKMLAPIAPHIGEELWDRLGHENTITYQPWPTFDESL 738


>gi|259486804|tpe|CBF84960.1| TPA: valyl-tRNA synthetase (AFU_orthologue; AFUA_8G04800)
           [Aspergillus nidulans FGSC A4]
          Length = 1033

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 128/444 (28%), Gaps = 73/444 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN---------- 151
             D    + + + +KG   K  ++     R     +  E                     
Sbjct: 404 RFDARYKVIEMLKEKGLYVKWEHNPMKIPRCAKSNDVIEPILKPQWWMKMESLAEPAIKA 463

Query: 152 --AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++    E  +FR     +      +       P                +L +
Sbjct: 464 VENGEIIIRPESAEKSYFRWLRGINDWCLSRQLWWGHQAPAYFVQIEGEEGDDSDGNLWV 523

Query: 210 SRKT------------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           + +                   +  D   ++  W  +     +T G+           +P
Sbjct: 524 TGRNEEEAQKKAEAKFPGKKFTLKRDED-VLDTWFSSGLWPFSTLGWPRQTH-DFENLYP 581

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
             +   G DIL F    +      ++  +P  K+V+ H  I   +G K+SKSLGNVIDP+
Sbjct: 582 TSVLETGWDILFFWVARMIMLGIKMTGKVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPL 640

Query: 315 EVI-------------------------------------EEVGVDALRYFLVREIACGK 337
           +V+                                      E G DALR+ LV     G 
Sbjct: 641 DVMEGIKLEDLHAKLLVGNLAEKEVATATKYQKKAFPKGIPECGADALRFSLVSYTTGGG 700

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCS 395
           D  +D   +         N I       +  +  D+         G  + S+  IL   +
Sbjct: 701 DIAFDIQVI--HGYRKFCNKIYQATKYVLGKLGDDFKPLPTPTKTGKESLSERWILHKFN 758

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +E+   ++++    A + V         D + +  K     +   +   +       
Sbjct: 759 AAAKEVNIALEDREFSHAASTVYQYWYSQLCDVFIENSKSLLAPELPQEVQESAKQTLYT 818

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +     ++   +P +  +++  L
Sbjct: 819 ALEGALTMIHPIMPFITEELWQRL 842



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K + + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 120 KVKPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWQRMKGKTTLWLPGMDHAGISTQ 179

Query: 60  KAAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                         +  +   N  +    +  S+D      T + 
Sbjct: 180 SVVEKMLWKKEKKTRHDLGRKAFLERVWDWKHEYHGNIGNALRRVGGSFDWTREAFTMDD 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 240 NLSAAVTETFVRLHEEGIIYRANRLVNWC 268


>gi|282875824|ref|ZP_06284691.1| leucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|281294849|gb|EFA87376.1| leucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329737148|gb|EGG73402.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737499|gb|EGG73752.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 805

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDELDWPESIKDMQRNWIGRSE 227



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPHNEKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 550 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGP 609

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   +I+   D           ++ S+  V 
Sbjct: 610 LDAAIAWSEKGL---------DGSRRFLDRVWRLII--TDENSINKKIVDSNNHSLDKVY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  ++E  +  +  KP+                    
Sbjct: 659 NQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEVYKPY-------------------- 698

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++D L   +    + + + D+ L
Sbjct: 699 IEGFVKMLSPIAPHIGEELWDRLGHENTITYQPWPTFDESL 739


>gi|91794218|ref|YP_563869.1| valyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716220|gb|ABE56146.1| valyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 968

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 129/414 (31%), Gaps = 100/414 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  + +     +   E+     +P +  N   S+++  + D  +SR+   W
Sbjct: 374 IEPLLTDQWYVAVQSMAKTAIEAVETGEIKFVPQQYENMYFSWMRD-INDWCISRQ-LWW 431

Query: 217 G--IKIPDDP----------------------------QYIMYVWIDALTNYLTTTGYLD 246
           G  I    D                               ++  W  +     +T G+ D
Sbjct: 432 GHRIPAWYDENGKVYVGRNEAEVRAKHKLADSAVLRQDDDVLDTWFSSALWTFSTLGWPD 491

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N +  K    P D+ V G DI+ F         +           +P      +      
Sbjct: 492 NLEDLKTFH-PTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDE 550

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
            G K+SKS GNV+DP+++I+ +                                     G
Sbjct: 551 AGNKMSKSKGNVLDPLDMIDGIELETLVEKRTGNMMQPQLAAKIEKSTRKEFSEGIEAHG 610

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM----- 376
            DALR+ L    + G+D  +D   L         N + N     +       D       
Sbjct: 611 TDALRFTLAAMASTGRDINWDMKRLDG--YRSFCNKLWNASRYVLMNTEVQADPESNAAG 668

Query: 377 ------------IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-- 422
                        P     + +D  I+ + ++ ++   ++M       A   +       
Sbjct: 669 EPLDCGQLLVDGKPGAMELSLADRWIIGLFNQTVKTFDDHMAAYRFDLAANTLYEFTWNQ 728

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             D Y +  KP  ++  +  +     +  V V+ ++  L+   +P +   I+  
Sbjct: 729 FCDWYLELTKP-VMQHGSEAQMRGTRHTLVTVLEKMQRLMHPIMPYITETIWQR 781



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA++  I D L R+ R+ G + L+  GTD  G      
Sbjct: 30  ESKGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLTRYQRMKGKNTLWQVGTDHAGIATQML 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         +  Q+          +   + +D    T ++  
Sbjct: 90  VERKLEAEEGKTRHDLGRDAFIDKVWDWKAQSGGTITKQLRRMGASVDWDRERFTMDEGL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               + ++ ++ D   IY+G     +  +     +D EV       +      P+
Sbjct: 150 SKAVQEVFVRLYDDELIYRGKRLVNWDPKLHTAISDLEVENKEKQGHMWHFRYPL 204


>gi|17546955|ref|NP_520357.1| valyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81504083|sp|Q8XX80|SYV_RALSO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|17429256|emb|CAD15943.1| probable valyl-trna synthetase (valine--trna ligase) protein
           [Ralstonia solanacearum GMI1000]
          Length = 968

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 128/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +     ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 389 PEGTRFPGRSIAEVALDAVQGGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 446

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  A     ++ G+  +   
Sbjct: 447 AWYDEAGNVYVARTEEEARAQAAAKGHTGAIKRDDDVLDTWFSAALVPFSSLGWPADTPE 506

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 507 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFQTVYVHGLVRDSEGKKMSKSEG 565

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 566 NTLDPVDLIDGIALEPLLVKRTTGLRRPKDAPNVEKRTRKEFPDGIPAFGADALRFTFAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G++  +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 626 LATLGRNINFDSSRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGLQECVGDCGPEGALH 682

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+ +D  I+S+  RV  E+ +   +       + +   V +   D Y +  K  +++   
Sbjct: 683 FSPADRWIVSLLQRVETEVEKGFADYRFDNIASAIYKFVWDEYCDWYLELAKV-QIQTGT 741

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 742 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 776



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D LAR  R+ G + L+  GTD  G       
Sbjct: 38  GRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMQGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        + +Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGISRHDLGRPAFVDKVWEWKEQSGSTITRQIRRMGASIDWEREYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               ++ ++ ++G IY+G     +        +D EV    +         P+   + +
Sbjct: 158 AVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGALWHIRYPLAQPDAK 216


>gi|254431958|ref|ZP_05045661.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626411|gb|EDY38970.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 880

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 75/201 (37%), Gaps = 5/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E     +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA  
Sbjct: 36  EPFVALSMFPYPSGNLHMGHVRNYVITDVIARVQRMRGRPVLHPMGWDAFGLPAENAAIE 95

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            GV    + D+N    R     L   I +D  + T    ++   + L+ +  + G  Y+ 
Sbjct: 96  RGVDPGDWTDRNIAAMRQQLQRLGLSIDWDREVATCHADYYRWTQWLFLQFLEAGLAYQK 155

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +  +   D+    +++V               V+  +   +F +++AY D+LL     
Sbjct: 156 DATVNWDPVDQTVLANEQVDSE---GRSWRSGALVEKRQLRQWFLKITAYADQLLDDLPQ 212

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +           SG
Sbjct: 213 LEGWPERVRTMQANWIGRSSG 233



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 100/320 (31%), Gaps = 72/320 (22%)

Query: 215 DWGIKIPD---------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIG 264
            W +  P          D              Y                 W P D +V G
Sbjct: 485 WWQVPCPCCGQPARRETDTMDTFMCSSWYFLRYSDPHNTTLPFSREAVDRWLPVDQYVGG 544

Query: 265 KDILRFHAIYWPAFL--------LSANLPL------------------------------ 286
            +    H +Y   F         L    P                               
Sbjct: 545 IEHAILHLLYARFFTKVLRDRGLLGFGEPFTRLLTQGMVQGITYRNPASGKYVAPADVAD 604

Query: 287 ---PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              P+   S   +    EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D 
Sbjct: 605 PTDPRDPISGEVLDTFYEKMSKSKHNGVDPAVVIDRYGADTARMFILFKAPPEKDLEWDD 664

Query: 344 DGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVL 398
             ++   R    L   +   ++R + +   + DG             ++  +       +
Sbjct: 665 ADVEGQFRFLQRLWRLVDGALARGLMLGPAEQDGTDSANLPTADLIPAERELRRAVHTAI 724

Query: 399 QEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
             + E++  +   + A+++++ L + +  + +A +       +P        V  E +R 
Sbjct: 725 AAVSEDLDGDFQFNTAVSELMKLSNAMADHLEASR-------DP--------VAREALRT 769

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L +LL  F P LA +++  L
Sbjct: 770 LVLLLAPFAPHLAEELWARL 789


>gi|108757222|ref|YP_628632.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461102|gb|ABF86287.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 966

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 98/282 (34%), Gaps = 19/282 (6%)

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           +    G         I+ VW D+          + +    K +  PADL + G D     
Sbjct: 556 QCPRCGKGEFRRETDILDVWFDSA--------CMFSAVLEKRQRIPADLFLEGSDQHRGW 607

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+    A       P    +     +  +GEK+SKS GNV+ P +VI++ G + LR ++
Sbjct: 608 FHSSMLVAVGTRDMSPYKACLTHGFVVDGQGEKMSKSRGNVVAPDKVIQQYGAEVLRLWV 667

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
                   D       LK    ++    I N V  ++S +  D+D              D
Sbjct: 668 AASDY-RNDVRLSDQILKGL--SEGYRKIRNTVRYALSNLY-DFDPAKHAVPEVELLPLD 723

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRA 444
              L   + V+  +R+  ++   H   A V+  V       YFD  K      + +    
Sbjct: 724 RWALGRLAEVVARVRKAYEDYEFHLVYATVVDFVAGDLSAVYFDILKDRLYTWRADGQPR 783

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                V  EV   L  LL   +   A + +  L        F
Sbjct: 784 RGAQTVLYEVASVLLRLLAPVMSFTAEEAWQTLPGKPAESVF 825



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +     Y N   H GHA   ++ D++ ++  + G    F  G D HG  I +A 
Sbjct: 54  DAEPFVLPDGPPYANGHLHAGHALNKVLKDIVVKYRNMSGRRCDFIPGWDTHGLPIEQAV 113

Query: 63  QNAGVTTKV----------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           +      K+                +  +     +     L +  S++   +T +  +  
Sbjct: 114 EKRLKDKKIDKRTLARDAFLEACRAYALEFVDIQKAEFQRLGVFGSWEQPYKTLDFTYEA 173

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                    + +G +Y+     ++ L D+    + EV  
Sbjct: 174 QEIRELATFAKRGMLYRRKKPVYWCLYDQTALAEAEVEY 212


>gi|309775575|ref|ZP_07670575.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916669|gb|EFP62409.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 799

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 86/253 (33%), Gaps = 16/253 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++ R  R+ G +VL   G D  G    + 
Sbjct: 30  DKPKCYVLDMFPYPSGNGLHVGHPEGYTATDIVCRMKRMQGHNVLHPMGWDAFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F   N  +FR+    L  SY  D  I TT+  ++   + ++ K+ DKG  
Sbjct: 90  AITTGNHPAQFTKMNIDHFREQIRALGFSYDWDREISTTDPNYYKWTQWIFLKLYDKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G   +       PV       +  +++ Y ++LL  
Sbjct: 150 YVDEIPVNWCPELGTVLANEEVIDGKSERGGF----PVIRKPMRQWVLKITEYAERLLED 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E         E +   I   K              + IK       +     D L    
Sbjct: 206 LELCDWPTSTKEMQINWIGKSKG---------ANVIFKIKDTSKEFTVFTTRCDTLFGAT 256

Query: 240 TTTGYLDNPDGSK 252
                 ++P   +
Sbjct: 257 YCVMAPEHPYVDE 269



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 109/380 (28%), Gaps = 57/380 (15%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +               Y   D ++              ++              +     
Sbjct: 395 MIAWLQEHNCGCAKTTYKLRDWLFSRQRYWGEPIPIIHMEDGTTRTVDIDELPLELPETK 454

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
            ++       P+    + ++    G+K    +     W                     Y
Sbjct: 455 NFKPSGSGESPLAHCEDWLNVEIDGVKGKRETNTMPQWA------------GSCWYYLRY 502

Query: 239 LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKK 289
           +              K W P DL+V G +    H +Y   +         +    P  + 
Sbjct: 503 IDPKNNDAIAAEELLKHWLPVDLYVGGAEHAVLHLLYARFWHKVLYDCGVVPTKEPFQRL 562

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                 +    EK+SKS GNV++P +++E  G DALR + +          +   GL   
Sbjct: 563 FHQGMILGENNEKMSKSRGNVVNPDDIVESHGADALRVYEMFMGPLEAALPWSTTGL--- 619

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                 +G    + R   +  +         G           V    ++++  +++   
Sbjct: 620 ------DGARRWLDRVWRLYTEYDKFTETNDGKLD-------KVYHATVKKVTNDVETLN 666

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           ++ A++Q++  ++E  +                       + VE  +  A +   F P +
Sbjct: 667 LNTAISQMMIFINECYK--------------------AESIYVEYAKGFAKMFACFAPHM 706

Query: 470 ANKIFDILFVADENRCFQSL 489
             +I+  +F  +    ++  
Sbjct: 707 GEEIWSRVFGGNGTITYEPW 726


>gi|15902279|ref|NP_357829.1| leucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517205|ref|YP_815756.1| leucyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|32171543|sp|Q8DRB6|SYL_STRR6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122279358|sp|Q04MJ2|SYL_STRP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15457782|gb|AAK99039.1| Leucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116077781|gb|ABJ55501.1| leucyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 833

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGVGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|254580401|ref|XP_002496186.1| ZYRO0C12474p [Zygosaccharomyces rouxii]
 gi|238939077|emb|CAR27253.1| ZYRO0C12474p [Zygosaccharomyces rouxii]
          Length = 1118

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 131/384 (34%), Gaps = 55/384 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E     +  ++     +   +    ++  F          
Sbjct: 579 WCISRQLWWGHRCPVYFIEIEGQENSKNDDKYWVSGRDIEEAEKKAKAKFPDAKFSLHQD 638

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +        F+P  +   G DIL F    +      ++ 
Sbjct: 639 EDVLDTWFSSGLWPFSTLGWPEKTA-DMENFYPFSMLETGWDILFFWVSRMILLGIKMTG 697

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
           ++P   +VF H  +   +G K+SKSLGNV+DP++VI                        
Sbjct: 698 SVPF-NEVFCHSLVRDAQGRKMSKSLGNVVDPLDVINGIKLADLHAKLYNGNLDSREVER 756

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         + G DA+R+ L      G+D   + D ++        N I      
Sbjct: 757 AKAGQSESYPNGIPQCGTDAMRFALCAYTTGGRDI--NLDIMRVEGYRKFCNKIYQATKF 814

Query: 365 SVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           ++  + +DY         G  +  ++ IL   S   + + E M  +    A +Q+  L  
Sbjct: 815 ALMKLGQDYQPPAKEGLSGNESLVEKWILHNLSSTAKTVNEAMDKREFLPATSQIYELWY 874

Query: 423 E-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D Y +  K    + T  ++  +       ++     L+  F+P ++ +++  L    
Sbjct: 875 LICDVYIENSKYLIQEGTEKEQ-KSAKDTLYTLLDNALRLIHPFMPYISEEMWQRLP--- 930

Query: 482 ENRCFQSLDQRLKPGFMLHKTFDP 505
             R   S+   +K  +    TF P
Sbjct: 931 -RRAEDSVPTLVKAAY---PTFTP 950



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L RF+R+ G  VLF  G D  G       +   
Sbjct: 197 FCIPAPPPNVTGALHIGHALTISIQDSLIRFNRMKGKTVLFLPGFDHAGIATQSVVEKQV 256

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCR 107
                                 +  +     +     L  SY       T + +      
Sbjct: 257 WNKEKKTRHDYGREAFVDKVWDWKTEYHERIKSQIKKLGASYAWSREAFTLDPKLSKAVV 316

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ D+G IY+      +S++
Sbjct: 317 EAFVRLHDEGIIYRDNRLVNWSVK 340


>gi|24380292|ref|NP_722247.1| leucyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|32171544|sp|Q8DS85|SYL_STRMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24378305|gb|AAN59553.1|AE015018_7 putative leucyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 833

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    +
Sbjct: 29  SSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  QN   F+     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGHDPADFTAQNIATFKRQIKSLGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEDLDWPESIKDMQRNWI 224



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 101/299 (33%), Gaps = 79/299 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D++V G +    H +Y   +         +   
Sbjct: 499 WYFLRYIDPHNDQKLADEDLLKQWLPVDVYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 558

Query: 284 LPLPK-----KVFSHGFILHKGE----------------------------KISKSLGNV 310
            P  K      +    +  H+G                             K+SKSL NV
Sbjct: 559 EPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETDEELEQAPAKMSKSLKNV 618

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E+ G D LR + +          + ++GL+              + R   +I 
Sbjct: 619 VNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLIT 669

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     +++  +  V + V++ + E+++    + A++Q++  V+  ++  + 
Sbjct: 670 --------TKEIAAKNNGHLDKVYNEVVKTVTEHLEAMRFNTAISQLMIFVNAANK--EE 719

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           Q   +  K                      LL  F P LA +++  L  + ++  + + 
Sbjct: 720 QLFLDYAKG------------------FIQLLAPFAPHLAEELWQFLTQSGQSITYVAW 760


>gi|242243018|ref|ZP_04797463.1| leucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233476|gb|EES35788.1| leucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 805

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDELDWPESIKDMQRNWIGRSE 227



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/281 (18%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPHNEKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 550 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGP 609

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   +I+   D           +D S+  V 
Sbjct: 610 LDAAIAWSEKGL---------DGSRRFLDRVWRLII--TDENSINKKIVDSNDHSLDKVY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  ++E  +  +  KP+                    
Sbjct: 659 NQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEVYKPY-------------------- 698

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++D L   +    + + + D+ L
Sbjct: 699 IEGFVKMLAPIAPHIGEELWDRLGHENTITYQPWPTFDESL 739


>gi|163856326|ref|YP_001630624.1| valyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163260054|emb|CAP42355.1| valS [Bordetella petrii]
          Length = 961

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 120/377 (31%), Gaps = 49/377 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +++  E           +           +   I         V     +     +    
Sbjct: 423 IKFYPENWTTIYNQWLNNIQDWCISRQLWWGHQIPAWYSEDGQVFVAHTEAQAQEQARAA 482

Query: 217 GI--KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
           G+   +  DP  ++  W  +     TT G+ ++    + ++ P+ + V G DI+ F    
Sbjct: 483 GVAGPLTRDPD-VLDTWFSSALVPFTTLGWPEDTPDLR-RYLPSSVLVTGFDIIFFWVAR 540

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL------- 325
           +      L+  +P              G+K+SKS GN +DP+++I+ +G+D L       
Sbjct: 541 MVMMTTHLTGQIPFKHVYVHGLIRDADGQKMSKSKGNTLDPVDLIDGIGLDGLVAKRTYG 600

Query: 326 ------------------------------RYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                                         R+ +      G++  +D    +     +  
Sbjct: 601 LMNPKQAGAIEKATRRQYPDGIPAFGTDALRFTMAAYATLGRNINFDLKRCEG--YRNFC 658

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N + N  +R V M  + +D     P   + +D  I+S    +  E+     +        
Sbjct: 659 NKLWN-ATRYVLMNTEGHDLGGDQPAELSFADRWIVSQLQALEAEVERGFADYRFDNVAN 717

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   V +   D Y +  K    + T   +  T     + V+  +  L    +P +   +
Sbjct: 718 ALYRYVWDEYCDWYVELAKVQIQQGTPAQQLGT-RRTLIRVLEAVLRLAHPIIPFITEAL 776

Query: 474 FDILFVADENRCFQSLD 490
           +  + V    R     D
Sbjct: 777 WQKVSVVAGKRQADVAD 793



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 18/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + E   I           H+GHA+   I D L R+HR+ G D +F  GTD  G      
Sbjct: 50  TDPEPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMRGDDTVFVPGTDHAGIATQIV 109

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +Q+          L  S D      T + R  
Sbjct: 110 VERRLDAEKVSRHDLGREKFIEKVWEWKEQSGNTITGQVRRLGASADWPREYFTMDDRMS 169

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
                 + ++  +G IY+G     +  +
Sbjct: 170 RGVVETFVRLYQQGLIYRGKRLVNWDPK 197


>gi|57867200|ref|YP_188890.1| leucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|71153179|sp|Q8CNU8|SYL_STAES RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71153568|sp|Q5HNF1|SYL_STAEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57637858|gb|AAW54646.1| leucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 804

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWPESIKDMQRNWIGRSE 226



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNEKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   +I+   D           ++ S+  V 
Sbjct: 609 LDAAIAWSEKGL---------DGSRRFLDRVWRLII--TDENSINKKIVDSNNHSLDKVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  ++E  +  +  KP+                    
Sbjct: 658 NQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEVYKPY-------------------- 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++D L   +    + + + D+ L
Sbjct: 698 IEGFVKMLSPIAPHIGEELWDRLGHENTITYQPWPTFDESL 738


>gi|325693816|gb|EGD35735.1| leucine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 861

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 233

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 234 DLEELDWPESIKDMQRNWI 252



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 104/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 515 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 574

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 575 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 634

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 635 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 686

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     +++ ++  V +  ++ + E ++    + A+AQ++
Sbjct: 687 -KFLDRVYRLIT--------SKEIVADNNGALDKVYNETVKSVTEQIEELKFNTAIAQLM 737

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  L 
Sbjct: 738 IFVNAANK--------------EEKLY------VEYAKGFVQLLAPFAPHLAEELWQSLA 777

Query: 479 VADENRCFQSLDQ 491
             DE+  + +   
Sbjct: 778 QTDESISYVAWPT 790


>gi|315425170|dbj|BAJ46840.1| isoleucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 1008

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 21/292 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           +++  WID+   +  +            K +P D      D     F+ + + + LL+  
Sbjct: 463 FVLDTWIDSGVAFYASID-ALRNTELFKKLFPYDFITEAIDQTRGWFYTLLFTSTLLTGK 521

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    +     +   G+K+SKS GNVI   +     GVD LR +LV +        +  
Sbjct: 522 APFKSVLNQGHVLDEFGKKMSKSRGNVIWAEDAFNTYGVDPLRIYLVSKAEPWSTINFVP 581

Query: 344 DGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGA----FTESDESILSVCSRVL 398
             +  R  A+  N + N+ + +     L  +D  +    +        D+ ILS  + ++
Sbjct: 582 SEV--RETAEDLNILWNIFAFASTYQKLDKFDPRMHKLTSYLHLLRPEDKWILSRVNDLV 639

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRASTVLYVTVEV 454
            ++   ++   IHRAL +++S + E + R Y  + +   W   +T P++ +        V
Sbjct: 640 AKVTNYLEEMEIHRALREIMSFIVEDLSRTYLRSVRRLAWTEAET-PEKMAA-YACLHYV 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRC-----FQSLDQRLKPGFMLHK 501
           +R+  +LL  F P  A  ++ +     +        +  LD  L    ++ +
Sbjct: 698 LRKTLLLLAPFAPYTAEILYQLQKTETDKESIHLENWPQLDTELYSPKIIEQ 749



 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 19/146 (13%)

Query: 20  PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT---------- 69
            HIGH    +  D++ R+  + G +V    G D  G       +     T          
Sbjct: 1   MHIGHTRGRVYKDIVLRYKTMRGYNVWRRGGWDCQGLPTEIEVEKRLGITSKRDVEKIGL 60

Query: 70  -------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                     VD    ++R  ++ L   + YD    T    + +    L KK  + GD+ 
Sbjct: 61  ERFVEEANKVVDHYLSHWRRASERLGLWLDYDRAYETRRDEYMEHVWHLLKKAHEMGDLV 120

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +           E   +  E+ +G +
Sbjct: 121 ESLRVVPTCPHCETALSQHEMAQGYE 146


>gi|291543960|emb|CBL17069.1| Isoleucyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 929

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 74/450 (16%), Positives = 137/450 (30%), Gaps = 39/450 (8%)

Query: 50  GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD---MADVLDI--SYDDFIRTTEKRHHD 104
             D+ G++ A+A + AG+ T       +    +   M    DI   Y    R      + 
Sbjct: 357 CVDDKGRQTAEAGEFAGLDTAEANKAIAARLVETGAMFASADIVHQYPHCWRCHSAIIYR 416

Query: 105 TCRILWKKISDKGDIYKGCYS---GWYSLRDEAYYN--DDEVYKGADGQYYNAQHNPVQW 159
                +  ++   D             +  +E       D        Q       PV +
Sbjct: 417 ATEQWFCSVNGFKDEAIKAIESVNWIPAWGEERIKGMVRDRSDWCISRQRTWGVPIPVIY 476

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            ++ G         + +             + R+    ++    L D   +      G K
Sbjct: 477 CKDCGKPIITDETIEAISE-----------MFRKEGSDAWYTRPLSDFIPASVACACGCK 525

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
             +    IM VW D+  ++                + P DL++ G D     F +    +
Sbjct: 526 EFEKEHDIMDVWFDSGVSHTAVLDEY------DELYAPCDLYLEGADQYRGWFQSSLLTS 579

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            +     P          +  +G+ + KSLGN IDP E+ ++ G D LR ++        
Sbjct: 580 VVYKGCAPYKNVCTHGWVVDGQGKTMHKSLGNGIDPSEITDKYGADILRLWVASSDY-HS 638

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK----DYDGMIPTPGAFTESDESILSV 393
           D    K+ L +   +D    I N     +  +      + D    +    TE D   L  
Sbjct: 639 DIRISKEILGQL--SDAYKKIRNTARFILGNLSNGKGFNPDADSVSDDQLTELDRWALMR 696

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVLYV 450
             +++ +          H     + +   V     Y D  K     +  +          
Sbjct: 697 LDQLIDKANAGYDAFDFHIVFHAIHNFCVVDMSSFYLDIIKDRLYCEGEDSVLRRAAQTT 756

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              V+  LA L+   +   A +I+  L  A
Sbjct: 757 MYRVLSGLARLVAPIMSFTAEEIWSYLPHA 786



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 15/162 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N + H+G A   ++ D + ++  + G    +  G D HG  I   
Sbjct: 49  EGKPKYVLHDGPPYANGEIHLGTALNKVLKDFIVKYKNMSGFCAPYVPGWDTHGLPIELK 108

Query: 62  -------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                  +  ++ RN       L     YD    T    +    
Sbjct: 109 AMKAIGVESGAIEPVELRKHCADYAMKHVRNQMAQFKRLGSLGDYDHPYLTLRPEYEARQ 168

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
             ++ K++  G +YKG    ++         + E+    D  
Sbjct: 169 VKVFGKMAKDGYMYKGLKPVYWCPDCNTALAEAEIEYENDPC 210


>gi|324990383|gb|EGC22321.1| leucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 858

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  QDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 230

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 231 DLEELDWPESIKDMQRNWI 249



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 512 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLRAWLPVDIYIGGAEHAVLHLLYARFWH 571

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 572 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 631

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 632 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGS--------- 682

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                      L   D ++ +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 683 --------RKFLDRVDRLLNSKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 734

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 735 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 774

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 775 QTGESISYVTWPT 787


>gi|125624531|ref|YP_001033014.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166231617|sp|A2RLY6|SYL_LACLM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124493339|emb|CAL98313.1| LeuS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071325|gb|ADJ60725.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 829

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 204

Query: 179 YYESHPEFILPIERRNEVI 197
             E         E +   I
Sbjct: 205 DLEEVDWPESIKEMQRNWI 223



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 99/300 (33%), Gaps = 82/300 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSSWYYLRYIDPNNSEALADPELLKEWLPVDIYVGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 546 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGGFYHMETGEALEQ 605

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E  G D LR + +          + ++GL+         G 
Sbjct: 606 APAKMSKSLKNVVNPDDVVEHYGADTLRVYEMFMGPLDASIPWSEEGLE---------GA 656

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R+V MI               E++  +  V +  ++ + E +     + A++Q++
Sbjct: 657 RKFLDRAVRMIE--------NSEIKAENNGELDKVYNETVKNVTERLDLMYFNTAISQLM 708

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+ V++                       + +E       LL  F P +A +++  L 
Sbjct: 709 IFVNAVNK--------------------AKALPLEYANGFVQLLAPFAPHIAEELWVKLG 748


>gi|290994685|ref|XP_002679962.1| predicted protein [Naegleria gruberi]
 gi|284093581|gb|EFC47218.1| predicted protein [Naegleria gruberi]
          Length = 648

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+ +   YP+   H+GH     I+D++AR H++ G +V+   G D  G     AA   GV
Sbjct: 13  YVLSMFPYPSGNLHMGHVRVYTISDLIARTHKMLGYNVIHPFGFDAFGLPAENAAIERGV 72

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           +   +  +N  + ++    LD  +D    + T    ++   + L+ ++  KG  Y+    
Sbjct: 73  SPADWTHKNIAHMKEQIKALDFDFDWEREVITCNPEYYKWTQWLFLQLHKKGLAYQQEAL 132

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V               V+      +FF++  + ++LL   ++   
Sbjct: 133 VNWDPIDNTVLANEQVDSQ---GRSWRSGALVERKNLRQWFFKIREFANELLEDADTLEN 189

Query: 186 FILPIERRNEVISFVKSG 203
           + + +    +       G
Sbjct: 190 WPINVRTMQKQWIGKSEG 207


>gi|281491310|ref|YP_003353290.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281375051|gb|ADA64569.1| Leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 829

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 204

Query: 179 YYESHPEFILPIERRNEVI 197
             E         E +   I
Sbjct: 205 DLEEVDWPESIKEMQRNWI 223



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 99/300 (33%), Gaps = 82/300 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSSWYYLRYIDPNNSEALADPELLKEWLPVDIYVGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 546 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGGFYHMETGEALEQ 605

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E  G D LR + +          + ++GL+         G 
Sbjct: 606 APAKMSKSLKNVVNPDDVVEHYGADTLRVYEMFMGPLDASIPWSEEGLE---------GA 656

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R+V MI               E++  +  V +  ++ + E +     + A++Q++
Sbjct: 657 RKFLDRAVRMIE--------NSEIKAENNGELDKVYNETVKNVTERLDLMYFNTAISQLM 708

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+ V++                       + +E       LL  F P +A +++  L 
Sbjct: 709 IFVNAVNK--------------------AKALPLEYANGFVQLLAPFAPHIAEELWVKLG 748


>gi|225378201|ref|ZP_03755422.1| hypothetical protein ROSEINA2194_03861 [Roseburia inulinivorans DSM
           16841]
 gi|225210007|gb|EEG92361.1| hypothetical protein ROSEINA2194_03861 [Roseburia inulinivorans DSM
           16841]
          Length = 805

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 16/255 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      
Sbjct: 31  TKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K+  ++N   F+D    L  S+  D  I TT+  ++   + ++ K+   G  
Sbjct: 91  AIKNKIHPKIVTEKNVARFKDQLHSLGYSFDWDREINTTDPNYYKWTQWIFLKLFKAGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV  G           PV    +  +  +++ Y +KL+  
Sbjct: 151 YKKEMPINWCTSCKVGLANEEVVNG----VCERCGAPVVRKVKSEWMLKITDYAEKLIEG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +           +   I                 D+ IK   D   +     D L    
Sbjct: 207 LDHVDYIERVKVSQKNWIGKSMG---------AEVDFSIKGKGDKLRVYTTRCDTLFGVT 257

Query: 240 TTTGYLDNPDGSKAK 254
                 ++P   K +
Sbjct: 258 YMVVSPEHPIIDKYQ 272



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 48/271 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y               K+W P D +  G +    H +Y   +         +   
Sbjct: 508 WYFLRYTDPHNDEALASPEALKYWMPVDWYNGGMEHTTLHLLYSRFWHKFLYDEGVVPCP 567

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K+      +   GEK+SKS GNV++P +++ E G D LR + +   A      + +
Sbjct: 568 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDDIVREYGADTLRTYEMFIGAFDLSASWSE 627

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           DG+K                R +  + K  D M    G   + +    +   + ++++  
Sbjct: 628 DGVKG-------------CRRFLERVWKLQDLMTDEEGYSADME----TKMHQTIKKVSS 670

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   + A+A +++L+++              K N         +T    + L  LL 
Sbjct: 671 DFENLKYNTAIAAMMALIND------------FYKKNA--------ITRGEFKTLITLLN 710

Query: 464 AFVPKLANKIFDILFVADE--NRCFQSLDQR 492
              P +  +++ I     +     +   D+ 
Sbjct: 711 PVAPHITEELWQIAGFEGKVYQTAWPEFDEA 741


>gi|329725485|gb|EGG61965.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 805

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDELDWPESIKDMQRNWIGRSE 227



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 103/281 (36%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPHNEKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 550 YDLGVVPTKEPFQKLYNQGMILGESNEKMSKSKGNVINPDDIVASHGADTLRLYEMFMGP 609

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + + GL         +G    + R   +I+   D           ++ S+  V 
Sbjct: 610 LDAAIAWSEKGL---------DGSRRFLDRVWRLII--TDENSINKKIVDSNNHSLDKVY 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  ++E  +  +  KP+                    
Sbjct: 659 NQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEVYKPY-------------------- 698

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++D L   +    + + + D+ L
Sbjct: 699 IEGFVKMLSPIAPHIGEELWDRLGHENTITYQPWPTFDESL 739


>gi|222479318|ref|YP_002565555.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452220|gb|ACM56485.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 1050

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 110/310 (35%), Gaps = 20/310 (6%)

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           R  E I      L   ++   T           + +  VW+D+      T GY  +   +
Sbjct: 492 RVEEDIDPKTIDLHRPAVDDLTVVEDGTTYRRVEDVFDVWLDSSVASWGTLGYPSDET-A 550

Query: 252 KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
             + WPAD  V   D     F +           +P  + +         G K+SKS+GN
Sbjct: 551 HDELWPADFIVEAHDQTRGWFWSQLGMGTAAVGEIPYEEVLMHGFANDENGRKMSKSVGN 610

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           ++ P E IE  G D LR +L+     G D  ++ DGL      +L   + N++       
Sbjct: 611 IVTPEEAIERAGRDPLRTYLLSHDQQGVDLAFEWDGL-----GELQGKL-NILWNVFRFP 664

Query: 370 LKDYDGMIPTP-------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
           L+  D     P       G     DE +LS    V  E+ E   +  +  A+  VI  V 
Sbjct: 665 LEYMDLDGYDPAEADLDDGELELVDEWVLSRLQSVETEVTEAWADYRVSDAVNAVIEFVT 724

Query: 422 SEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +V R Y  A +    ++ +              + +   LL    P +  +++  L   
Sbjct: 725 QDVSRFYVKAVRDRMWEEADSASKRGAYATLATALDETTRLLAPIAPYMTERMYQTL--D 782

Query: 481 DENRCFQSLD 490
            E      LD
Sbjct: 783 GEATTVHQLD 792



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    +      Y + Q H+G A+   + D + R  R+ G  V    G D HG  I    
Sbjct: 36  DDPPFFFVDGPPYTSGQMHLGTAWNKTLKDAIIRHKRMTGHRVTDRPGYDMHGLPIEVKV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       K F  +N     +    + +   +DD   T +  + 
Sbjct: 96  EEELGFENKRDIEEYGMESFIEKCKEFALRNRAAMDEDFQSIGVWMDWDDPYETIDPEYM 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     +  ++D G + +G  S     R E    ++EV  
Sbjct: 156 EAAWWAFSNVADNGLVEQGKRSISQCPRCETGLANNEVEY 195


>gi|15672798|ref|NP_266972.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|14285774|sp|Q9CHB6|SYL_LACLA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12723739|gb|AAK04914.1|AE006315_3 leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326406367|gb|ADZ63438.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 829

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KNKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 204

Query: 179 YYESHPEFILPIERRNEVI 197
             E         E +   I
Sbjct: 205 DLEEVDWPESIKEMQRNWI 223



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 99/300 (33%), Gaps = 82/300 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSSWYYLRYIDPNNSEALADPELLKEWLPVDIYVGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 546 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGGFYHMETGEALEQ 605

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E  G D LR + +          + ++GL+         G 
Sbjct: 606 APAKMSKSLKNVVNPDDVVEHYGADTLRVYEMFMGPLDASIPWSEEGLE---------GA 656

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R+V MI               E++  +  V +  ++ + E +     + A++Q++
Sbjct: 657 RKFLDRAVRMIE--------NSEIKAENNGELDKVYNETVKNVTERLDLMYFNTAISQLM 708

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+ V++                       + +E       LL  F P +A +++  L 
Sbjct: 709 IFVNAVNK--------------------AKALPLEYANGFVQLLAPFAPHIAEELWVKLG 748


>gi|258569569|ref|XP_002543588.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903858|gb|EEP78259.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 964

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 20/234 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             REK Y+     YP+   H+GH     I+DVLARF R+ G DVL   G D  G     A
Sbjct: 70  TAREKAYVLPMFPYPSGTLHMGHVRVYTISDVLARFKRMKGYDVLHPMGWDAFGLPAENA 129

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+    + ++N    ++    L   +D              R L+  + +KG  Y+
Sbjct: 130 AIERGINPADWTEENIAKMKEQLKALGTEFD------------WDRRLFLMLHEKGLAYQ 177

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 Y   D+    +++V          A+   V+  E + +FFR++A+++ LL   +
Sbjct: 178 AKAMVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKRELKQWFFRITAFKEALLKDLD 234

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           S     L       ++S  +  L     +R TF       +    +     D L
Sbjct: 235 S-----LADGWPERILSMQRHWLGKSVGARLTFKIITPDENLHVQVFTTRADTL 283



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 23/219 (10%)

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKRVNADL 354
               EK+SKS  N +DP   IE+ G DA R  ++      +   +D+  +   +R  + L
Sbjct: 656 NVSFEKMSKSKYNGVDPSLCIEKYGADATRAHILFAAPVSEVLEWDEAKIVGVQRWFSRL 715

Query: 355 ANGIGNLVSRSVS----MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--Q 408
                +L +   S     +       +P     ++ +  +L +    +  +   ++    
Sbjct: 716 WKVTCDLQTFLASEPGLNLADANGLALPPLDRLSDKEAELLLLAHSTISSVTTCLEKNPY 775

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVP 467
            ++ A++ +  L + +        P  L  T    A  TV Y+   ++  L  LL    P
Sbjct: 776 ALNTAISDLTKLTNAIS-----TSP--LCPTASSSASRTVSYI---IVSSLLRLLAPIAP 825

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
             +++ +++L  +     + + +    P  +      P+
Sbjct: 826 AFSSECWEVLHAS----VWTNHEAEFSPSVLSSPWPKPL 860


>gi|158289903|ref|XP_311528.4| AGAP010420-PA [Anopheles gambiae str. PEST]
 gi|157018382|gb|EAA07254.5| AGAP010420-PA [Anopheles gambiae str. PEST]
          Length = 1052

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 125/423 (29%), Gaps = 97/423 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + V+ + +  ++ + S           +    I P     ++       ++D  +
Sbjct: 455 CSRSKDIVEPLIKPQWYVKCSEMAANATEAVRTGALAITPDV-HKKIWYHWMDEIRDWCV 513

Query: 210 SRKTFDWGIKI------------------------------------------------P 221
           SR+   WG +I                                                 
Sbjct: 514 SRQ-LWWGHRIPAYQVVFKDPAKAPKNLSDENLWFVGRTEAEALSKAASTLKVDKALISM 572

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
              + ++  W  +     +  G+ DN D  K  F+P  L   G DIL F    + +    
Sbjct: 573 KQDEDVLDTWFSSGLFPFSVFGWPDNTDDLK-LFYPTTLLETGHDILFFWVARMVFFGQT 631

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI---------------------- 317
           L   LP  +           G K+SKSLGNVIDP++VI                      
Sbjct: 632 LLGKLPFKEVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLEGLHKQLYDSNLDPREI 691

Query: 318 ---------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                           E G DALR+ L   +   +D   D   ++        N + N  
Sbjct: 692 EKAKAGQKQDYPNGIPECGTDALRFALCAYMTQARDINLDIQRVQG--YRFFCNKLWNAT 749

Query: 363 SRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++      + YD +    G  +  D  ILS  +  ++      +      A     + 
Sbjct: 750 KFALMYFPGAEKYDIITSLDGLESNLDRWILSRLAGCIETANRGFEKYEFALATNACYNF 809

Query: 421 V--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 D Y +  K    +  +    ++        +     LL  F+P +  +++  L 
Sbjct: 810 WLYDLCDVYLECLKS-VFQTNDESAKASARRTLYTCLNLGLKLLSPFMPFITEELYQRLP 868

Query: 479 VAD 481
             D
Sbjct: 869 RGD 871



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 19/146 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  +           H+GHA    I D + R+HR+ G   L+  G D  G       +
Sbjct: 127 KGQFVMVIPPPNVTGSLHLGHALTNAIEDAITRWHRMKGRTTLWVPGCDHAGIATQVVVE 186

Query: 64  NAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                                    + ++           L     +D    T + +   
Sbjct: 187 KKLWREHKQTRHDLGREKFIDKIWQWRNEKGDRIYHQLKKLGSSFDWDRACFTMDPKLCK 246

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSL 130
                + ++ + G IY+      +S 
Sbjct: 247 AVTEAFVRMHEMGMIYRSSRLVNWSC 272


>gi|294778619|ref|ZP_06744041.1| isoleucine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447568|gb|EFG16146.1| isoleucine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 1162

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 102/270 (37%), Gaps = 14/270 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y            ++PAD    G D     F  ++
Sbjct: 623 KPMKREADLIDVWFDSGAMPYAQLHYPFENKEIVDNRTYYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGAIEQYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D DG+ + V       + N  S        D   Y           E D  IL
Sbjct: 743 PWDNLKFDTDGVDE-VRRKFFGTLYNTYSFFALYANVDGFAYQEAEVPVNERPEIDRWIL 801

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           SV + +++ +     +    +A   +   V++   + Y   + ++ W    +  D+ S  
Sbjct: 802 SVLNSLVKNVDACYNDYEPTKAGRLITDFVNDNLSNWYVRLNRKRFWGNAMS-QDKLSA- 859

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +  +A L+    P  A++++  L
Sbjct: 860 YQTLYTCLETVARLMAPIAPFYADRLYTDL 889



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +  ++   T 
Sbjct: 94  VELGVEKALHITKEDIGKTISVAEYNAACRKDVMKFTKEWTDLTHKMGYWVDLENPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++ +KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|46446681|ref|YP_008046.1| leucyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|60390710|sp|Q6MCC8|SYL_PARUW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46400322|emb|CAF23771.1| probable leucyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 845

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G +V+   G D  G    + 
Sbjct: 29  QKPKYYVLDMFPYPSGAGLHVGHVVGYTATDIIARYMRTKGYNVMHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  N+R     L  SYD    + T++  ++   + ++ K+ +KG  
Sbjct: 89  AIRTGTHPAESTQENINNYRRQLRALGFSYDWNRELATSDPNYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y         ++E+  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YEAEMLVNYCPALGTVLANEEIENGKT----KDGGHPVERRPLKQWILKITAYADRLLQD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDLLDW 210



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 103/304 (33%), Gaps = 82/304 (26%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFW-PADLHVIGKDILRFHAIY 274
           K       IM  W  +   YL      +        K K+W P DL++ G +    H +Y
Sbjct: 495 KKAFRDTNIMPQWAGSCWYYLRFCDPHNTEKAFSPEKEKYWLPVDLYIGGVEHAVLHLLY 554

Query: 275 WPAFL--------LSANLPL-----------------------PKKV----------FSH 293
              +         +    P                        P+ V           + 
Sbjct: 555 ARFWHKVLYDCGYVHTLEPFQTLRNQGLVVARSYQNKMRVYVEPRYVEQRDGKYFDSRTG 614

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +  + +K+SKS  N   P E+I+E G DALR + +      K         +K  N D
Sbjct: 615 EELTSQIDKMSKSKLNGESPDEIIQEYGADALRLYEMFMGPLEK---------EKVWNTD 665

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             +G    ++R   M   D            E+ E  L +  R++  + ++M+    + A
Sbjct: 666 AVSGTRRFLNRFYEMAFSD--------KVTNETSEEGLKLGHRLVHSVMKDMELLQFNTA 717

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+++  ++E  +     K                    +VI+    +L  F P LA ++
Sbjct: 718 IAKMMEFINEFTKLVTYPK--------------------QVIQMATQVLAPFAPHLAEEV 757

Query: 474 FDIL 477
           ++ L
Sbjct: 758 WEHL 761


>gi|19745338|ref|NP_606474.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|32171569|sp|Q8P2T2|SYL_STRP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19747441|gb|AAL96973.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 833

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 100/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHLETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLVT--------TKEIVAENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|152967386|ref|YP_001363170.1| leucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189030283|sp|A6WDL7|SYL_KINRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151361903|gb|ABS04906.1| leucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 855

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 12/235 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER K Y+     YP+   H+GHA    + DV+AR+    G DV+   G D  G     AA
Sbjct: 60  ERPKKYVLDMFPYPSGDLHMGHAEAYALGDVIARYWLQRGFDVMHPIGWDAFGLPAENAA 119

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +   N    R        S+  D  + T++  ++   + L+ K+ +KG  Y
Sbjct: 120 IKRGLDPRRWTYDNIAQQRASMRRYACSFDWDRVLHTSDPEYYRWNQWLFLKLYEKGLAY 179

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V      +   A+   V   +   ++FR++ Y D+LL   
Sbjct: 180 RKDSLVNWDPVDQTVLANEQVLPDGTSERSGAK---VVKKKLTQWYFRITEYADRLLDD- 235

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
               E   P +  +   +++         +    ++ I+  D+P  +     D L
Sbjct: 236 LDTLEGQWPAKVISMQRNWI------GRSTGAEVEFAIEGRDEPVTVYTTRPDTL 284



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 107/300 (35%), Gaps = 40/300 (13%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-----AKFWPADLHV 262
            ++  +   G     DP   M  ++D  + Y        +   +      A++ P D +V
Sbjct: 516 WVNVPSPVDGSPARRDPD-TMDTFVD-SSWYFLRFVSPHDDTKAFDTDLIAQWGPVDQYV 573

Query: 263 IGKDILRFHAIYWPAF----LLSANLPL---PKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            G      H +Y             LP      ++ + G +   G  +SKS GN++   +
Sbjct: 574 GGVTHAILHLLYARFITKVLHDLGYLPFDEPFTRLLNQGMVQMDGSAMSKSKGNIVRLSD 633

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            +EE GVDA+R  +        D   D   +    +A        L            D 
Sbjct: 634 QLEEHGVDAIRLTMAFAGPPEDDI--DWADVSPSGSAKFLGRAWRLAR----------DV 681

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                   T  D ++ SV  R L E+ ++++    + A+A+++ LV+   +  D      
Sbjct: 682 TSEPGVDPTTGDAALRSVTHRTLHEVSQHVEAFRFNVAVARLMELVNATRKAID------ 735

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
              + P      +    E +   A++L  F P  A  ++ +L          + ++D+ L
Sbjct: 736 ---SGPGAGDPAVR---EAVEATAVVLSLFAPYAAEDMWSLLGHDPCVARAGWPAVDESL 789


>gi|302408275|ref|XP_003001972.1| valyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358893|gb|EEY21321.1| valyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 919

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 75/457 (16%), Positives = 145/457 (31%), Gaps = 66/457 (14%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-----N 155
           R  D    + ++++  G   K   +       E   +  E                    
Sbjct: 409 RRFDARYTVVEELTKLGLFVKKEPNPMKIPLCEKSKDVIEPIIKPQWWMQMQDMADAALK 468

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS------- 208
            V+  E +      +    + ++         +P  R          G   +        
Sbjct: 469 VVESGEVKISPESANKSYRRWMASINDWWGHRIPAYRVVFEGEDASEGDDSVWVVGRTTE 528

Query: 209 --LSRKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
               +    +G K      DP   +  W  +    ++T G+ +       +F+P  L   
Sbjct: 529 EAQEKAAAKYGSKKFHLEQDPD-CLDTWFSSGLWPMSTLGWPNTESPDFKQFFPTSLLET 587

Query: 264 GKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI--- 317
           G DIL F    +   +  L+  +P  K+V+ H  I   +G K+SKSLGNVIDP+++I   
Sbjct: 588 GWDILFFWVARMIMLSLKLTGRVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPLDIISGI 646

Query: 318 ----------------------------------EEVGVDALRYFLVREIACGKDGFYDK 343
                                              E G DALR  L+     G D  +D 
Sbjct: 647 ELDQLHAKLHVGNLKEDEISRAIKYQKTAFPGGIPECGADALRLTLISYTTGGGDINFDI 706

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIR 402
                       N I       +  + +D+  +        +  +  IL   +  ++ I 
Sbjct: 707 K--VMHAYRRFCNKIWQASKYVLGRLPEDFVPLNKLDTAKLSIPERWILHRMNVAVKGIN 764

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++ +   ++         +   D + +  K   L   +P+  S+V       +     
Sbjct: 765 DTLEAREFSKSTQFAYQFFYDELCDIFIENSKT-ILSDGSPEAQSSVQQTLFLALDVALR 823

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
           L+  F+P +  +++  L    EN   +++     P F
Sbjct: 824 LMHPFMPFITEELWQRLP-KRENDTAKTIMLAPYPAF 859



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 19/143 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H GHA    + D L R+HR+ G   L+  G D  G       +  
Sbjct: 114 TFVIPLPPPNVTGALHCGHALANALQDTLIRWHRMKGFTTLWVPGCDHAGISTQSVVEKM 173

Query: 66  GVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  + D+  +   +   ++  S D      T +K      
Sbjct: 174 LWKKEQRTRIDVGREGFVRMVWDWKDEYHQRINNAQKLMGGSMDWSREAFTMDKNLSAAT 233

Query: 107 RILWKKISDKGDIYKGCYSGWYS 129
              + ++ D+G IY+      + 
Sbjct: 234 AETFCRLHDEGLIYRSSRLVNWC 256


>gi|15807168|ref|NP_295897.1| leucyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459971|gb|AAF11720.1|AE002050_6 leucyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 874

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 70/193 (36%), Gaps = 6/193 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF    D  G     AA  
Sbjct: 97  EKFYALTMFPYPSGNLHIGHWYANVAPDARARWLRMRGYNVLFPMAFDAFGLPAENAAIK 156

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +   N          +   I +     T +  ++   +  + +   +G  YK 
Sbjct: 157 NNTNPATWTYANIERMTGQFSRMGTMIDWSRKFATCDPEYYRWNQWFFIEFWKRGLAYKK 216

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V  G            V+      ++ +++ Y ++LL +  +
Sbjct: 217 GGLVNWCPKDQTVLANEQVVNGH----CERCGTAVERRNLSQWYLKITDYAEELLDFSAT 272

Query: 183 HPEFILPIERRNE 195
                +   + N 
Sbjct: 273 DMPEKVRAMQTNW 285



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 108/305 (35%), Gaps = 40/305 (13%)

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
                LP              L +   +      G     +    M  ++D  + Y+   
Sbjct: 512 QLPVKLPENVAFTPTGQSPLKLDEEWKTTTCPCCGGPAERETD-TMDTFVD-SSWYMYRY 569

Query: 243 GYLDN----PDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS--- 292
              +      D SKA   P DL+  G +    H +Y   W   +    L    + F+   
Sbjct: 570 LSPNYDGGPFDPSKAGLLPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLR 629

Query: 293 --HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                +   GEK+SKS GNV+DP +++ E G D +R FL+        G +D  G+    
Sbjct: 630 NQGMVLGEDGEKMSKSRGNVVDPDDLVREYGADTVRAFLMFIAPWELGGPWDPQGI---- 685

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
                NG    +SR  ++  +  + +         +D  +       L+++ ++ +    
Sbjct: 686 -----NGPSKWLSRVWNVFFE--EKVSGPEEKMQGAD--VRFAVHSALKKVNDDFERMSF 736

Query: 411 HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
           +  ++ ++ L + +             K +P   + V     E +     +L   VP +A
Sbjct: 737 NTIISTLMELTNAL----------VKAKRSPVFGTPVWE---EALDIFNRMLAPVVPHIA 783

Query: 471 NKIFD 475
            +I+ 
Sbjct: 784 EEIWH 788


>gi|326803764|ref|YP_004321582.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651632|gb|AEA01815.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 927

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 19/270 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PAD+++ G D     F++    + 
Sbjct: 517 FTKENDIMDVWFDSGSS------WAGVLQTRDELSYPADMYLEGSDQYRGWFNSSLLTSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P  + V        +G K+SKSLGN + P +V ++ G D LR ++    +   D
Sbjct: 571 AVNDHAPYKEVVSQGFVNDGEGRKMSKSLGNTVSPNDVCDQRGADILRLWVASVDSRY-D 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
                D L +   A+    I N +  ++   L D+D              D+ IL + + 
Sbjct: 630 VRISDDILGQV--AESYRKIRNTLRFTLG-NLFDFDAKENYVAYDDLDSIDQYILVLLNE 686

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP--WELKKTNPDRASTVLYVTV 452
           ++  + +   +   +    ++I+ +++V    Y D  K   + L   +P R   +  V  
Sbjct: 687 LVDHVIDYYNHYDFNSIYQEIINFLTQVMSSFYLDYSKDVTYILLADDPKR-RNMQTVMY 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482
           EV++++ ILL   +P    +I+  +  A++
Sbjct: 746 EVLKKMTILLTPIIPHTTEEIWSYMGEAED 775



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E   +     Y N   HIGHA   I  D++ R   + G    +  G D HG  I +A
Sbjct: 45  KDNEPFVLHDGPPYANGNIHIGHALNKITKDIIVRSKNMQGYYSPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
             N+GV  K       R          I               ++D   T  K+      
Sbjct: 105 VTNSGVDRKSMSTAEFRQICQDYASQQIDSQRQDFKRLGGQGDWEDPYITYTKKFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ +++ KG IY+G    ++S   E+   + E+  
Sbjct: 165 RVFGEMAKKGLIYRGNKPVYWSPSSESTLAEAEIEY 200


>gi|323488399|ref|ZP_08093646.1| leucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323397906|gb|EGA90705.1| leucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 803

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRVKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ ++  KG  
Sbjct: 89  ALDTGNDPAEFTAKNIETFKRQIQELGFSYDWDREISTTDPSYYKWTQWIFIQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++EV  G          +PV+      +  R++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMRQWVLRITNYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWPESLKDMQRNWIGKSE 226



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 130/357 (36%), Gaps = 59/357 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                + F    Y  + +         + P+E ++  +    +     S + ++    I 
Sbjct: 410 YRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVEEKDLPLMLPVTTDIKPSGTGESPLANIT 469

Query: 220 IPDDPQY------------IMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVI 263
              +  +             M  W  +   YL      ++    D    K W P D+++ 
Sbjct: 470 DWVNVVHPETGMKGRRETNTMPQWAGSCWYYLRFIDPTNDEILADPELLKRWLPVDVYIG 529

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPI 314
           G +    H +Y   +         +S   P  K +F+ G IL +G EK+SKS GNV++P 
Sbjct: 530 GAEHAVLHLLYARFWHKVLYDIGVVSTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPD 588

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           ++IE  G D LR + +          +  +GL         +G    + R   +++   D
Sbjct: 589 QIIESHGADTLRMYEMFMGPLEASIAWSTNGL---------DGSRRFLDRIWRLLM---D 636

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
               +      +D  +  V  + ++++ ++ +    + A++Q++  ++E  +        
Sbjct: 637 EEQLSAKITDSNDGKLEKVYHQTVKKVTDDFEGLRFNTAISQMMVFINEGYK-------- 688

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                       V  +  E +     LL    P +A ++++ L     +  +++  Q
Sbjct: 689 ------------VDSIPKEYVEGFVKLLSPIAPHVAEELWEKLGHEG-SVTYENWPQ 732


>gi|309362614|emb|CAP27936.2| CBR-VARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 1075

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 138/391 (35%), Gaps = 59/391 (15%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--- 217
             +    R   +  ++ +YY S  +         E     K+  +    + K F      
Sbjct: 504 SRDWCISRQLWWGHRIPAYYVSFTDKREQPLAEEEYWVSAKTEEEARQKAAKKFQVAEDL 563

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I++  D   ++  W  +        G+ DN       F+P+ +   G DIL F    + +
Sbjct: 564 IQLKWDED-VLDTWFSSGMWPFAVFGWPDNTK-DMDLFFPSAVLETGHDILFFWVARMVF 621

Query: 276 PAFLLSANLPLP---------KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDAL 325
            A  L+  LP           K++  H  I    G K+SKSLGNVIDP++VI  V ++ L
Sbjct: 622 MAQELTGKLPFKVIKGVRILKKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGVTLEGL 681

Query: 326 RYFLVREIACGKDG-----------------------------------FYDKDGLKKRV 350
           +  L+      K+                                      + D L+ + 
Sbjct: 682 QAQLLSGNLDEKEIAVAKAGQARDYPDGIPECGVDALRFALLNYTSQGRDINLDVLRVQG 741

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTESDESILSVCSRVLQEIRENMQN 407
                N I   V  S++   +  +            T +D+ ILS  ++ ++E  E ++ 
Sbjct: 742 YRFFCNKIWQAVRFSLNQFNEKPEQKPTFNIDLSKATPTDKWILSKLAKAVKETNETLKV 801

Query: 408 QLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
               +A +   +       D Y +A KP  L   NP      + V    +     L+   
Sbjct: 802 YNFTQATSITYNFWLYDFCDVYIEAIKP-VLYGDNPTLRQIAISVLHLCVDTGLRLISPL 860

Query: 466 VPKLANKIFDIL-FVADENRCFQSLDQRLKP 495
           +P ++ +++  L  +AD +    S+     P
Sbjct: 861 MPFISEELWQRLPRLADSDYSAPSIMVAQYP 891



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
              E   I           H+GHA    + D + RF+R+ G   LF  G D  G      
Sbjct: 121 SNTESFTICIPPPNVTGTLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVV 180

Query: 62  AQNA---------------GVTTKVFVDQNSRN--FRDMADVLD--ISYDDFIRTTEKRH 102
            +                     +V+  +N +     D    L   + +D  + T + + 
Sbjct: 181 VEKRLKRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKM 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++ + G IY+      +S 
Sbjct: 241 CRAVTEAFIQMHESGTIYRSNRLVNWSC 268


>gi|304403904|ref|ZP_07385566.1| leucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304346882|gb|EFM12714.1| leucyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 815

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 39  GKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGFNVLHPMGWDAFGLPAEQH 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   +    +N  NFR     L  SY  D    TT+  ++   + ++ ++ +KG  
Sbjct: 99  ALDTGEHPREITVKNINNFRRQIKSLGFSYDWDREFSTTDPDYYKWTQWIFIQLYNKGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  +++ Y ++LL  
Sbjct: 159 YVAEVPVNWCEALGTVLANEEVIDGKS----ERGGHPVVRKPMRQWVLKITEYAERLLED 214

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   K
Sbjct: 215 LEELDWTESIKEMQRNWIGKSK 236



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 101/267 (37%), Gaps = 42/267 (15%)

Query: 224 PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   Y   +      +     K K W P DL++ G +    H +Y   + 
Sbjct: 496 ETNTMPQWAGSCWYYLRFIDPHNDQEICSKEKQKEWLPVDLYIGGAEHAVLHLLYARFWH 555

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  K V     +    EK+SKS GNVI+P E++ E G D LR + + 
Sbjct: 556 KVLYDIGVVDTKEPFHKLVNQGMILGTNNEKMSKSRGNVINPDEIVNEFGGDTLRMYEMF 615

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    ++ +G++         G    +SR   + + D DG +       +  E+  
Sbjct: 616 MGPLEATKPWNANGVE---------GTYRFLSRVWRLFIGD-DGALNAKVTDGDGSEAFK 665

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               R ++++ ++ +N   + A++Q++  V++  +           +  P +A       
Sbjct: 666 RTWHRTIKKVTDDFENLRFNTAISQLMIFVNDAYK----------AEELPRKA------- 708

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
              +     +L    P +A ++++ L 
Sbjct: 709 ---MENFVQMLSPLAPHIAEELWEKLG 732


>gi|148977649|ref|ZP_01814225.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963164|gb|EDK28432.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 201

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 11/174 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  +L ++ A+ Y N   H+GH  E I AD+  R+ RL G  V F    D HG  I   
Sbjct: 3   TDPRQLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           AQ  G+T +  +   S   +      DIS+D++  T    + +    ++ ++   G I  
Sbjct: 63  AQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEG 164
              S  +    E +  D            E   G +       ++P + ++ + 
Sbjct: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKS 176


>gi|305664442|ref|YP_003860729.1| putative valyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88708459|gb|EAR00695.1| putative valyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 876

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 113/324 (34%), Gaps = 21/324 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWGIKI 220
             +   +  +      ++          + +N+ +     +  L+      +  +  I+ 
Sbjct: 391 RHWMENIRDWNISRQLWWGQQIPAYYYGDGQNDFVVAETKEEALELARAKSQNPNLKIED 450

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPA 277
                 ++  W  +    +T    +  PD    + ++P    V G DI+ F    +    
Sbjct: 451 LKQDPDVVDTWFSSWLWPMTVFNGILEPDNEDISYYYPTSDLVTGPDIIFFWVARMIISG 510

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           +      P     F+      +  K+SK LGN  D +++IE  G D +R  L+   A G 
Sbjct: 511 YEYRDEKPFENVYFTGLVRDKQRRKMSKQLGNSPDALKLIENYGADGVRVGLLLSSAAGN 570

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +D+D  ++  N   AN I N         + D     P P A         +  ++ 
Sbjct: 571 DLMFDEDLCQQGKN--FANKIWNGFRLLKGWEVADL----PQPEASKLGISWYKAKFNQT 624

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VE 453
           L EI ++     I  AL  +  LV       D    W L+   P     +   T    + 
Sbjct: 625 LVEIEDHFSKYRISDALMAIYKLVW------DDYSSWLLEIIKPAYQQPIDRKTFDEVIT 678

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           +      LL  F+P L  +I+  +
Sbjct: 679 LFEGNLKLLHPFMPFLTEEIWQHI 702



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYSIVIPPPNVTGILHMGHMLNNTIQDVLIRKARLMGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        +  +      +    L  S D      T +     
Sbjct: 92  VARLKEQGIDKADLSREEFLKHAWDWTHEYGGVILEQLKKLGCSCDWERTAFTMDDNMSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +  +     +D+EV  
Sbjct: 152 SVNKVFVDLFNKGLIYRGHRMVNWDPQALTTLSDEEVIY 190


>gi|313905504|ref|ZP_07838868.1| isoleucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469688|gb|EFR65026.1| isoleucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 1061

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/469 (11%), Positives = 134/469 (28%), Gaps = 26/469 (5%)

Query: 41  DGLDVLFTTGTDE-------HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD 93
              D  F    D+        G+      +      K              D   I +  
Sbjct: 343 RKYDAPFVQMVDDKGCLRPETGKFAGMRCKPTEAEVKEGAISADPEVLKDLDERGILF-- 400

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS-LRDEAYYNDDEVYKGADGQYYNA 152
               +  +        W+  +      +  +    + ++D+   N+ E+           
Sbjct: 401 ----SAPKVEHDYPHCWRCDTPLIYYARESWFIKMTAVKDDLVRNNKEINWIPQTIGEGR 456

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             N ++ +++ G            +       +      R            + + L R 
Sbjct: 457 FGNWLENIQDWGISRNRYWGTPLPVWICPDCGKQHCVGSRAELAELTGNPANETIELHRP 516

Query: 213 ---TFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                 +         +    ++  W D+         Y         K +PA       
Sbjct: 517 YVDNVTFKCPDCGGEMHRVPEVIDCWFDSGAMPYAQLHYPFENKELFEKEFPAQFISEAV 576

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F++++  + LL         +     +   G K+SKS GN ++P+  +E+ G D
Sbjct: 577 DQTRGWFYSLHAESTLLFNKPAYKNVIVLGLVLDGDGNKMSKSKGNAVEPMGALEKFGAD 636

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPG 381
           A+R++     +      +    + +     +           +   +  +D         
Sbjct: 637 AIRWYFYINSSPWLPNKFHDKAVTEYSRRFMGTLWNTYAFWVLYANIDKFDPTKYELDYE 696

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTN 440
             +  D+ +LS  + +++    N++N  I  A   + S V ++ + Y    +     K  
Sbjct: 697 KLSVMDKWLLSRMNTMVKTTDNNLENYRIPEAAKALESFVDDMSNWYVRRSRERFWAKGM 756

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                         +  L+      +P +  +I+  L    +    +S+
Sbjct: 757 EQDKINAYMTLYTALVTLSKAAAPMIPFMTEEIYQNLVRTVDAGAPESI 805



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D++ R+  + G +V    G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVLTRVIKDMIPRYRTMKGYEVPRKAGWDTHGLPVELEVEKEIGIEGKD 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    +   +  +      DD   T +    ++     K+I
Sbjct: 107 EIEAYGIEPFIGKCKESVWKYKGMWEQFSHKVGFWADMDDPYVTYDDNFIESEWWALKEI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             KG +YKG     Y        +  EV +G  
Sbjct: 167 WKKGLLYKGFKVVPYCPSCGTPLSSHEVAQGYK 199


>gi|260592110|ref|ZP_05857568.1| isoleucine--tRNA ligase [Prevotella veroralis F0319]
 gi|260535988|gb|EEX18605.1| isoleucine--tRNA ligase [Prevotella veroralis F0319]
          Length = 1221

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 110/310 (35%), Gaps = 44/310 (14%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           K       ++ VW D+ +       Y    + +                           
Sbjct: 664 KPMHRESDLIDVWFDSGSMPYAQLHYPFEGEINSDGLKATGMSEAAYRDALIHSTYEGIA 723

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK +G
Sbjct: 724 VPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVG 783

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV DP E++ + G D +R++++       +  +D +G+ +         + N  S     
Sbjct: 784 NVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFA-- 840

Query: 369 ILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
           +  + DG  PT          E D  I+S  + +++ +   +++    RA   + S V  
Sbjct: 841 LYANVDGYEPTNCKAIKADAPEIDRWIISKLNSLIKGVTAELEDFDPTRAGRLIDSFVNN 900

Query: 422 SEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              + Y   + ++ W   K       +        +  +A LL  F P  A++++  L  
Sbjct: 901 DLSNWYVRLNRKRFW--GKEMSADKQSAYDTLYTCLMTVARLLAPFAPFYADQLYRDLGG 958

Query: 480 ADENRCFQSL 489
             E+      
Sbjct: 959 ECESIHLDRW 968



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGEPQFIFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMQGYQVRRKAGWDTHGLPVELG 97

Query: 62  AQNA----------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--T 97
            +                            +  V + +  +R + + +    D      T
Sbjct: 98  VEKELGITKKDIDNHSSERYISTEDYNHKCRENVMKFTAEWRQVTEEMGYFVDMEHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|269926093|ref|YP_003322716.1| isoleucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789753|gb|ACZ41894.1| isoleucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 1049

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 71/446 (15%), Positives = 149/446 (33%), Gaps = 46/446 (10%)

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           D   +  + F + T K  HD  + +   +  KG +Y+                +      
Sbjct: 344 DESGVFLEGFGQLTGKYVHDVAKDIADNLRAKGILYRTQNYLHRYPVCWRCGTELVFRLV 403

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN----EVISFV 200
            +      +  P+     E   +  S  +D+ L +  +  ++++  +R       +    
Sbjct: 404 DEWFISMDELRPLLMDITEQINWIPSFGKDRELDWLRNMEDWMISKKRYWGLALPIYECQ 463

Query: 201 KSGLKDLSLSRKTF-----------------------------DWGIKIPDDPQYIMYVW 231
           K G  ++  S                                 + G K+   P  +   W
Sbjct: 464 KCGTFEVIGSETELKERAVEGWEQFEGHSPHRPWVDAVKIACKNCGEKVSRIPD-VGNPW 522

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVI---GKDILRFHAIYWPAFLLSANLPLPK 288
           +DA     +T  Y  +    + +++PAD       G+    F+++   +  L    P   
Sbjct: 523 LDAGIVPFSTLCYRHDRKYWE-EWFPADFITESFPGQFRNWFYSLLTMSATLEGKPPFKT 581

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK---DG 345
            +        KGE++ KS GN I   +  +++GVD +R +L       ++  +     D 
Sbjct: 582 VLGYALMRDEKGEEMHKSKGNAIWFDDAADKMGVDVMR-WLFCSHNPAQNLNFGYRIGDE 640

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +++R    L N     V+ +   +              T  D  ILS  + ++ ++R  M
Sbjct: 641 VRRRFILPLWNSYSFFVTYA--RLDNYTPTTEFDKNHLTLLDRWILSRLNTLINDVRYFM 698

Query: 406 QNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
               +  A  ++   V     + Y    +    K  N        Y     +  L+ L+ 
Sbjct: 699 DQYDMMNATKKIERFVIDELSNWYIRRNRRRFWKSINDADKQAAYYTLYNCMVTLSKLVA 758

Query: 464 AFVPKLANKIFDILFVADENRCFQSL 489
            F+P +A +++  L         +S+
Sbjct: 759 PFIPFIAEEMYQNLVRTHNPASPESV 784



 Score = 43.2 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 23/147 (15%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------GVTT 69
            N    + HA+     DV+ R+H + G    +  G D  G  +    +            
Sbjct: 51  ANNPMGVHHAWGRTYKDVVQRYHTMLGHRQRYQNGFDCQGLWVEVEVEKELGLKTKRDIE 110

Query: 70  KVFVDQNSRNFRD---------------MADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
           K  +D+     +                +A+ +D     F  T    ++ T     KK  
Sbjct: 111 KFGIDRFVEECKKRVLHFADVITRQSIRLAEWMDWDNSYF--TMSDENNYTIWGFLKKCY 168

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +KG IYKG     +  R     +  E+
Sbjct: 169 EKGWIYKGHDVMPWCPRCGTGISQHEI 195


>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200211|sp|A4IM25|SYI_GEOTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 924

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 78/449 (17%), Positives = 147/449 (32%), Gaps = 30/449 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVF---VDQNSRNFRDMADVLDI--SYDDFIRTTEKR- 101
               DE G    +A   AG+        + Q       +  +  I  SY    RT +   
Sbjct: 344 LCPVDERGYMTEEAPGFAGMFYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKQPTI 403

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              T +        +  +        +          + V    D      +        
Sbjct: 404 FRATTQWFASIDKIRDQLLDAIKETKWVPEWGEIRIHNMVRDRGDWCISRQRA-----WG 458

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                F     +  +      H   +      N         L     +  +   G  + 
Sbjct: 459 VPIPVFYGENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNG--LF 516

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
                IM VW D+ +++                  PADL++ G D     F++    A  
Sbjct: 517 TKETDIMDVWFDSGSSHQAVLVER------DDLERPADLYLEGSDQYRGWFNSSLSTAVA 570

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++   P    +     +  +G K+SKSLGNV+ P +V+E++G D LR ++        D 
Sbjct: 571 VTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASVDYQA-DV 629

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRV 397
               + LK+   +++   I N   R +   L D+D        G   E D  +L+  +++
Sbjct: 630 RISDNILKQV--SEVYRKIRNTF-RFMLGNLFDFDPNQNAVPVGELGELDRYMLAKLNKL 686

Query: 398 LQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEV 454
           + ++++   +        ++     V     Y D  K     +    RA   V  V  E 
Sbjct: 687 IAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADCRARRAVQTVLYET 746

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  LA L+   +P  A+++++ +    E 
Sbjct: 747 VVALAKLIAPILPHTADEVWEHIPNRKEQ 775



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGFCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             +  +   N R     L +   +D+   T +  +     
Sbjct: 105 LTKQGVDRKSMSVAEFRKLCEQYAYEQIDNQRQQFKRLGVRGDWDNPYITLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 214


>gi|282891368|ref|ZP_06299870.1| hypothetical protein pah_c050o175 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498865|gb|EFB41182.1| hypothetical protein pah_c050o175 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 856

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D+LAR+ R  G +VL   G D  G    +
Sbjct: 33  RAKPKYYVLDMFPYPSGSGLHVGHPEGYTATDILARYKRQKGFNVLHPMGWDNFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V   +N  NF+     L  SY  D  I T++  ++   + ++ K+ +KG 
Sbjct: 93  YAIRTGTHPAVTTKKNVENFKRQLQSLGFSYDWDREISTSDPSYYKWTQWIFTKLYEKGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   S  +         ++E+  G          + V+      +  +++AY ++LL 
Sbjct: 153 AYEAEMSVNFCPALGTVLANEEIENG----RAKEGGHVVERRPLRQWVLKITAYAERLLQ 208

Query: 179 YYESHPE 185
             +    
Sbjct: 209 DLDLLDW 215



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/447 (15%), Positives = 135/447 (30%), Gaps = 94/447 (21%)

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           D  +   ++ H    + +           K   S            +      A+    N
Sbjct: 366 DPELTAEDENHDQIQQAIACGKKCWTGNGKAINSQHNDFSINGLTTEQAKESVANWLESN 425

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI-----ERRNEVISFVKSGLKD 206
            +       +   + F    Y  +           I  +           IS  K     
Sbjct: 426 QKGRKTISFKLRDWLFSRQRYWGEPFPLLHFEDGTIRTLDLDELPLCPPQISQYKPASDG 485

Query: 207 LSLSRKTFDWGI-------KIPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFW 256
            S      +W         K        M  W  +   Y+      ++         ++W
Sbjct: 486 SSPLANAPEWVFITDVKTGKAARRETNTMPQWAGSCWYYIRFCDPHNDVEAWSKEAEQYW 545

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPL--------------------- 286
            P DL+V G +    H +Y   +         LS + P                      
Sbjct: 546 LPVDLYVGGVEHAVLHLLYSRFWHKVLYDCGFLSTSEPFQTLRNQGLITARSFQNSLGAY 605

Query: 287 --PKKV------FSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             P+ V      + H     K     EK+SKS  N + P E+IEE G D+LR + +    
Sbjct: 606 VAPEDVQEKEGEYFHRETGEKLKSQIEKMSKSKLNGVSPDEIIEEFGADSLRLYEMFMGP 665

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             K         +K  N D  +G    ++R   + +        +P    E+    L + 
Sbjct: 666 LEK---------EKVWNTDAVSGCRRFLARFYDLAV--------SPKLTQETTVEALKLG 708

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            R+++ + E++     + A+A+++  +++  +                    +      V
Sbjct: 709 HRLVKGVEEDIVAMQFNTAIAKMMEFINDFSK--------------------LDTYPASV 748

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           ++  A  L  F P LA +I++IL + +
Sbjct: 749 LKMAAQALYPFAPHLAEEIWEILGIKE 775


>gi|207342764|gb|EDZ70425.1| YLR382Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 249

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 5/198 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI     YP+   HIGH    +I+D L RF++  G +V+   G D  G     AA    +
Sbjct: 50  YILCQFPYPSGALHIGHLRVYVISDSLNRFYKQKGYNVIHPMGWDAFGLPAENAAIERSI 109

Query: 68  TTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++   N    +     +  +  +D  I T +  ++   + ++ K+ + G  Y+    
Sbjct: 110 NPAIWTRDNIAKMKQQMQSMLANFDWDREITTCDPEYYKFTQWIFLKLFENGLAYRKEAE 169

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V               V+  + + +F  ++ +  KL  +     +
Sbjct: 170 INWDPVDMTVLANEQVDAQ---GRSWRSGAIVEKKQLKQWFLGITKFAPKLKKHLNQLKD 226

Query: 186 FILPIERRNEVISFVKSG 203
           +   +++  + +     G
Sbjct: 227 WPSNVKQMTKKLDRRICG 244


>gi|229087291|ref|ZP_04219433.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695993|gb|EEL48836.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 802

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F ++N   FR+    L  SY  D  + TT+  ++   + ++ ++ +KG 
Sbjct: 88  YALDTGNSPAEFTEKNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLQLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEDLDWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGSTETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|86133790|ref|ZP_01052372.1| valyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820653|gb|EAQ41800.1| valyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 878

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 18/261 (6%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLL 280
            +  +  W  +    ++    + NP+  + K++ P +  V G DIL F    +    +  
Sbjct: 455 DEDALDTWFSSWLWPMSVFDGIRNPENEEIKYYYPTNDLVTGPDILFFWVARMIVAGYEY 514

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P      +      +  K+SKSLGN  D +++I++ G D +R  L+     G D  
Sbjct: 515 KDAKPFENVYLTGLVRDKQRRKMSKSLGNSPDALKLIDDYGADGVRVGLLLSAPAGNDIL 574

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D+D  ++      AN I N   R +     D     P       S     +   + L E
Sbjct: 575 FDEDLCQQ--GKGFANKIWN-AFRLIKGWEVDASLEQPETAKIGLS--WYEAKFQKALAE 629

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEVIR 456
           I ++     +  AL  +  L++      D    W L+   P     +  VT    +EV+ 
Sbjct: 630 IEDHFSKYRLSDALMAIYKLIN------DDFSSWLLEIVKPAYQHPIDQVTFDAIIEVLE 683

Query: 457 QLAILLQAFVPKLANKIFDIL 477
               +L  F+P L  +I+  +
Sbjct: 684 NNLKVLHPFMPFLTEEIWQFI 704



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        + D+      +    L  S D      T +    +
Sbjct: 92  VAKLKEQGIAKSDLTREEFLQHAFDWKDEYGGIILEQLKKLGASCDWERTAFTMDPEMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIH 190


>gi|327459125|gb|EGF05473.1| leucine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 861

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 233

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 234 DLEELDWPESIKDMQRNWI 252



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 515 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 574

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 575 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 634

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + +DGL+           
Sbjct: 635 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEDGLEGSR-------- 686

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     +++ ++  V    ++ + E ++    + A+AQ++
Sbjct: 687 -KFLDRVYRLIT--------SKEIVADNNGALDRVYHETVKSVTEQIEELKFNTAIAQLM 737

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 738 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 777

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 778 QTGESISYVAWPT 790


>gi|225856014|ref|YP_002737525.1| leucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782840|sp|C1CID7|SYL_STRZP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225726165|gb|ACO22017.1| leucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIIAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|225018393|ref|ZP_03707585.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
 gi|224948811|gb|EEG30020.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
          Length = 928

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 67/436 (15%), Positives = 134/436 (30%), Gaps = 41/436 (9%)

Query: 51  TDEHGQKIAKAAQN--AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           TD+  + IAK  +        +  + Q    +R  + ++  + + +  + +    D  + 
Sbjct: 375 TDDANKAIAKKLEETGNLFAIQKIIHQYPHCWRCKSPIIYRATEQWFCSIDDFKEDAVKA 434

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +       G   +          D                Y      P+   +       
Sbjct: 435 ITDVNWIPGWGEERIKGMVRDRSDWCISRQRVWGVPIPIIYCKECGKPIINDDTIHAIAD 494

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
               +                     E+   +  G++        F            IM
Sbjct: 495 TFRKEGSD-------------AWFAKEISEIIPEGIECPDCHCHEFR-------KETDIM 534

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
            VW D+  ++ +  G       +    WPADL++ G D     F +    A       P 
Sbjct: 535 DVWFDSGVSHASVLG------DNPEMRWPADLYLEGSDQYRGWFQSSLLTAVATKGTAPY 588

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                    +  +G K+SKS+ N + P ++I + G D LR ++        D     + L
Sbjct: 589 KNVCTHGWVVDGEGRKMSKSMQNGVAPEKIISQYGTDILRLWVASSDY-HADVRISPEIL 647

Query: 347 KKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           K+   ++    I N     +  I   D +       +  E D+  L     +++++ E  
Sbjct: 648 KQL--SEAYRKIRNTARFILGNISDFDPNTDKVDNSSLHEIDKWALVKLDALIKKVNEAY 705

Query: 406 QNQLIHRALAQVISL--VSEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAIL 461
                H     + +   V   + Y D  K         +   A T +YV   ++  L  L
Sbjct: 706 NAFDFHIIYHAIHNFCVVDMSNFYLDIIKDRLYCGNMEDRRAAQTAMYV---ILDSLTRL 762

Query: 462 LQAFVPKLANKIFDIL 477
           +   +   + +I+  L
Sbjct: 763 IAPILAFTSEEIWSFL 778



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 23/233 (9%)

Query: 3   EREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E + LYI      Y N   H+G A   ++ D + +   + G    +  G D HG  I   
Sbjct: 47  EGKPLYILHDGPPYANGAIHLGTALNKVLKDFIVKQKNMSGYKAPYIPGWDTHGLPIELK 106

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                 A    +T        K +   +  N +     L +   Y++   T         
Sbjct: 107 ALKSAGADKNTITPVELRKVCKDYALSHVENQKAQFKSLGVLGDYENPYLTLRPEFEARQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ +++ +  IYKG    ++    +    + E+    D  Y       V   +++G+F
Sbjct: 167 IEIFGEMAKRDFIYKGLKPVYWCPECDTALAEAEIEYAEDPCYSIYVKFAV--TDDKGFF 224

Query: 167 FRLSAYQDKLLSYYESHPEFILP-----IERRNEVISFVKSGLKDLSLSRKTF 214
            +    ++K+     +   + LP         N   + VK+G +   ++R+  
Sbjct: 225 EKQGIDKNKVFFVIWTTTTWTLPGNLAICLGPNYDYTLVKNGEEYYVMARELV 277


>gi|225858106|ref|YP_002739616.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782515|sp|C1CB31|SYL_STRP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225722073|gb|ACO17927.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 104/316 (32%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E + +   + A+AQ++
Sbjct: 659 -KFLDRVYRLIR--------SKEIVAENNGALDKVYNETVKAVTEQIDSLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENR---CFQSLDQ 491
              E+     + + D+
Sbjct: 750 ATGESISYVTWPTWDE 765


>gi|222151682|ref|YP_002560838.1| leucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782505|sp|B9E7H4|SYL_MACCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222120807|dbj|BAH18142.1| leucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 802

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 90/241 (37%), Gaps = 9/241 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +  Y      YP+    H+GH       D+++RF R+ G +VL   G D  G    + 
Sbjct: 28  KDKNFYALDMFPYPSGAGLHVGHPEGYTATDIISRFKRMQGYNVLHPMGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N   F+     L  SYD    I TT+  ++   + ++ ++  KG  
Sbjct: 88  AIDTGNDPAEFTEKNIATFKRQIQELGFSYDWEREINTTDPEYYKWTQWIFIQLYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV       +  +++ Y D+LL  
Sbjct: 148 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVIRKPMRQWVLKITEYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            E         + +   I   +    +++   +  D   K+       +Y    A+ +  
Sbjct: 204 LEELDWPESLKDMQRNWIGRSEG--AEVAFEVENLDHSFKVFTTRPDTIYGATYAVLSPE 261

Query: 240 T 240
            
Sbjct: 262 H 262



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 109/279 (39%), Gaps = 46/279 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +      K+ P DL++ G +    H +Y   + 
Sbjct: 484 ETNTMPQWAGSCWYYLRYIDPKNSDMIADPELLKKWLPVDLYIGGAEHAVLHLLYARFWH 543

Query: 280 --------LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                   +    P  K +F+ G IL +G EK+SKS GNV++P +V+   G D LR + +
Sbjct: 544 KVLYDLGVVHTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDVVASHGADTLRLYEM 602

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                     +  +GL         +G    + R   +++ +   +            S+
Sbjct: 603 FMGPLDASIAWSTNGL---------DGARRFLDRVYRLLVNEDGTLSEKITEQPVG--SM 651

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
             V  + ++++ ++ +    + A++Q++  ++E  +               ++ +     
Sbjct: 652 EKVYHQTVKKVTDDYETLGFNTAISQMMVFINEGYK--------------SEQLN----- 692

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            ++ IR    LL    P +  ++++ L    E+  +++ 
Sbjct: 693 -IDHIRGFVKLLNPIAPHITEELWEKLG-GTESITYEAW 729


>gi|295399580|ref|ZP_06809562.1| leucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109865|ref|YP_003988181.1| leucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294979046|gb|EFG54642.1| leucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214966|gb|ADP73570.1| leucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 805

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 82/219 (37%), Gaps = 7/219 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N   FR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTEKNINTFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV       +  R++AY D+LL  
Sbjct: 149 YIDEVPVNWCPALGTVLANEEVING----RSERGGHPVIRKPMRQWMLRITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E         E +   I   +       +      + +
Sbjct: 205 LEELDWPESIKEMQRNWIGRSEGAEIRFEVDGHNETFTV 243



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 141/412 (34%), Gaps = 61/412 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +      K++   GDI K  Y+G     +  + N    ++ + K  +    
Sbjct: 341 HDERDYEFAKKFNLPIKEVVAGGDIAKEAYTGDGEHINSDFLNGLNKEEAIKKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +           + F    Y  + +         + P+      +   K+     S +
Sbjct: 401 NGKGQKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVPEEELPLKLPKTDQIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKF 255
            ++    I+   +                M  W  +   YL      ++       K K 
Sbjct: 461 GESPLANIEEWVNVIDPKTGKKGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLKK 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P ++IE  G D LR + +          +   GL         +G    + R  
Sbjct: 581 RGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLERVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + +   + P      E+D ++  V  + ++++ E+ +    + A++Q++  ++E  +
Sbjct: 632 RLFVDENGELNPKIVDNPETD-TLERVYHQTVKKVTEDYEALRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 P   KK                +     LL    P +  ++++ L 
Sbjct: 691 -----APVLPKK---------------YMEGFVKLLSPVCPHIGEELWEKLG 722


>gi|148996678|ref|ZP_01824396.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576317|ref|ZP_02722200.1| leucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307066932|ref|YP_003875898.1| leucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147757253|gb|EDK64292.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577874|gb|EDT98402.1| leucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408469|gb|ADM83896.1| Leucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|167738900|ref|ZP_02411674.1| valyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167903004|ref|ZP_02490209.1| valyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167911243|ref|ZP_02498334.1| valyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|237811974|ref|YP_002896425.1| valine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237506350|gb|ACQ98668.1| valine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 955

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPDVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|229496737|ref|ZP_04390448.1| valyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316283|gb|EEN82205.1| valyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 873

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 122/379 (32%), Gaps = 54/379 (14%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            E               P++      +F ++       L   E     ++P + +N    
Sbjct: 332 KEEDYTNKVGCSERTQVPIEPKLSMQWFLKMEELAGPALEAVEKDEVRLIPAKFKNT-YR 390

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP------------------------------------D 222
                +KD  +SR+   WG +IP                                     
Sbjct: 391 HWMENVKDWCISRQ-LWWGHRIPAYYLPQGGFVVAPTPEEALEKAKKETGCPSLTLADLR 449

Query: 223 DPQYIMYVWIDALTNYLTTT-GYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           + +  +  W  +    +T      D  +     ++P ++ V   DIL F    +    + 
Sbjct: 450 EEEDCLDTWFSSWLWPITVFGDIDDKDNKELNYYYPIEVLVTAPDILFFWVARMIIAGYR 509

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                P      +      +G K+SKSLGN  DP+ +IE+ G D +R  ++   + G D 
Sbjct: 510 YRGQRPFRDVYLTGIVRDAQGRKMSKSLGNSPDPLNLIEKYGADGVRVGMMMATSAGNDL 569

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVL 398
            YD+  L++  N        N +  S  +I          PG     + E      +  L
Sbjct: 570 LYDESLLEQGRN------FCNKIWNSYRLISNWQADASAKPGEANLLAVEWFRHRLAEAL 623

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            EI + M    I  A+     L  +     Y +A KP      +    +   +     + 
Sbjct: 624 LEIDDLMSKYRISEAMTVAYKLYRDDFSAFYLEAIKPPFGAPMDAQTLAATHHY----LE 679

Query: 457 QLAILLQAFVPKLANKIFD 475
            L   L  F+P +  +++ 
Sbjct: 680 VLLQTLHPFMPFITEELWQ 698



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 18/163 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   +           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYTVVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLLGYNACWVPGTDHASIATEAKV 91

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  ++     +    L  S  +D    T ++    
Sbjct: 92  VARLAEQGIDKRTLTRETFLKHAWDWTHEHGGIILEQLKRLGASCDWDRTAFTLDEDRSR 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++  + + G IY+G     +  + +   +D+EV    + 
Sbjct: 152 SVIKVFCDLYESGLIYRGVRIVNWDPKAQTALSDEEVIYREEH 194


>gi|73540566|ref|YP_295086.1| valyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|90101548|sp|Q474E1|SYV_RALEJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72117979|gb|AAZ60242.1| Valyl-tRNA synthetase, class Ia [Ralstonia eutropha JMP134]
          Length = 955

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 84/550 (15%), Positives = 173/550 (31%), Gaps = 114/550 (20%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFT-TG------TDEHGQKIAKAAQNAGVTTKVF 72
           E ++ DV         R+  L G +V    TG       DE+  +              F
Sbjct: 230 ETMLGDVAVMVHPEDERYAHLIGKEVELPLTGRRIPVIADEYVDREFGTGVVKVTPAHDF 289

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEK------RHHDTCRILWKKISDKGDIYKGCYSG 126
            D       ++  +  ++ D  I             +D  + +   +  +G + +     
Sbjct: 290 NDYAVGQRHNLPQISILTLDAKITADAPGNYAGQDRYDARKAIVADLEAQGLLVETKKHK 349

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
             + R E   +  E           ++  P      EG F+   +  +  L   +S    
Sbjct: 350 LMTPRSERTGSAIEPMLTDQWFVAMSKPAP------EGTFYPGRSIAEVALDAVQSGEIK 403

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD--------------------- 223
           ++P    N   +   + ++D  +SR+   WG  I    D                     
Sbjct: 404 LVPENW-NSTYNQWLANIQDWCISRQ-LWWGHQIPAWYDDAGNCFVARTEEEAQAKAKAA 461

Query: 224 --------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
                    + ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +
Sbjct: 462 GSTGALRREEDVLDTWFSSALVPFSSLGWPEETPELK-HFLPSSVLVTGYDIIFFWVARM 520

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P             +G+K+SKS GN +DP+++I+               
Sbjct: 521 VMMTKHFTGQVPFHTVYVHGLVRDSEGKKMSKSEGNTLDPVDLIDGIDLDTLLKKRTTGL 580

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+        G++  +D    +     +  N
Sbjct: 581 RRPKDAPKIEKKTKKEFPEGIPAFGADALRFTFASLATLGRNINFDTGRCEG--YRNFCN 638

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA---------FTESDESILSVCSRVLQEIRENMQN 407
            + N  +R V M  + +D  +              F+++D  I+S+  RV  ++ +    
Sbjct: 639 KLWN-ATRFVLMNTEGHDCGMGPCNNDCGPDGYLHFSQADRWIVSLLQRVEADVEKGFAE 697

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                  + +   V +   D Y +  K      T   + +T     + V+  +  L    
Sbjct: 698 YRFDNIASAIYKFVWDEYCDWYLELAKVQIQTGTEAQQRAT-RRTLLRVLETVLRLAHPI 756

Query: 466 VPKLANKIFD 475
           +P +  +++ 
Sbjct: 757 IPFITEELWQ 766



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 23/176 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA+   I D L R  R+ G + L+  GTD  G       +
Sbjct: 39  KPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMLGANTLWVPGTDHAGIATQIVVE 98

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                             T KV+  +       +R  R M   +D + + F  T      
Sbjct: 99  RQLEAQGVSRHDLGREKFTEKVWAWKEESGSTITRQVRRMGASIDWTREYF--TMSPDMS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNAQHNPVQ 158
                ++ ++ ++G IY+G     +        +D EV     DG  ++ ++  V+
Sbjct: 157 KAVTEVFVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVEEDGFLWHIRYPLVE 212


>gi|167824493|ref|ZP_02455964.1| valyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226192955|ref|ZP_03788567.1| valine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254188551|ref|ZP_04895062.1| valyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254297874|ref|ZP_04965327.1| valyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157806938|gb|EDO84108.1| valyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936230|gb|EDO91900.1| valyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|225935045|gb|EEH31020.1| valine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 955

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPDVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|237710459|ref|ZP_04540940.1| isoleucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229455181|gb|EEO60902.1| isoleucyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 1162

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 14/270 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y            ++PAD    G D     F  ++
Sbjct: 623 KPMKREADLIDVWFDSGAMPYAQLHYPFENKEIVDNRTYYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D+LR++++   +
Sbjct: 683 AIATMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGAIEQYGSDSLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D DG+ + V       + N  S        D   Y           E D  IL
Sbjct: 743 PWDNLKFDTDGVDE-VRRKFFGTLYNTYSFFALYANVDGFAYQEAEVPVNERPEIDRWIL 801

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           SV + +++ +     +    +A   +   V++   + Y   + ++ W    +  D+ S  
Sbjct: 802 SVLNSLVKNVDACYNDYEPTKAGRLITDFVNDNLSNWYVRLNRKRFWGNAMS-QDKLSA- 859

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +  +A L+    P  A++++  L
Sbjct: 860 YQTLYTCLETVARLMAPVAPFYADRLYTDL 889



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +  ++   T 
Sbjct: 94  VELGVEKALHITKEDIGKTISVAEYNAACRKDVMKFTKEWTDLTHKMGYWVDLENPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++ +KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDITVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|94989658|ref|YP_597758.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|123382456|sp|Q1JIV9|SYL_STRPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94543166|gb|ABF33214.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 98/308 (31%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|116198217|ref|XP_001224920.1| hypothetical protein CHGG_07264 [Chaetomium globosum CBS 148.51]
 gi|88178543|gb|EAQ86011.1| hypothetical protein CHGG_07264 [Chaetomium globosum CBS 148.51]
          Length = 987

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 5/195 (2%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     IADV+ARFH L G +VL   G D  G     AA   G+
Sbjct: 94  YVLPMFPYPSGYLHLGHLRVYTIADVVARFHSLQGHNVLLPMGWDAFGLPAENAAIERGI 153

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              ++  +N    ++   +++ S+D    + T +   +   + ++  + ++G  Y+    
Sbjct: 154 NPAIWTKENIAKMKEQLGLMNGSWDWSCELSTCDPSFYKHTQKIFLLLREQGLAYQAEAE 213

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             Y   D+    +++V          A+   V+  + + +F R+S +++ LL   +   E
Sbjct: 214 VNYDPVDKTVLANEQVDSNGCSWRSGAK---VEKRKLKQWFLRISEFRESLLKDLDVLAE 270

Query: 186 FILPIERRNEVISFV 200
                ER   +    
Sbjct: 271 NGAWPERVLAMQKNW 285



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/449 (12%), Positives = 123/449 (27%), Gaps = 114/449 (25%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN---------EVISFVKSGLKD 206
           PV+      +      Y    +          +P+             E  +  K+G   
Sbjct: 484 PVEKWRLRDWLISRQRYWGTPIPIIHCDSCGAVPVPEEQLPVVLPEVDEHWAGKKAG-NP 542

Query: 207 LSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPA 258
           L       +        P       M  ++D+   Y+      +  +    +      P 
Sbjct: 543 LETQEDWVNTPCPNCSGPAKRDTDTMDTFVDSSWYYMRFVDAHNKHEPFSPEKAQSMLPV 602

Query: 259 DLHVIGKDILRFHAIYWPAFLL-----------------SANLPL--------------- 286
           DL++ G +    H +Y                       + + P                
Sbjct: 603 DLYIGGIEHAILHLLYARFIYKSLMTSSLTPGEEVDVADTTHEPFQRLITQGMVHGRTYA 662

Query: 287 --------------------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
                               PK   +        EK+SKS  N +DP +VI + G DA R
Sbjct: 663 DPSTGKFLKPDEVDLSDPLAPKVAATDEAATVSYEKMSKSKHNGVDPTDVIAQHGADATR 722

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI----------LKDYD-- 374
             ++ +    +   +D D +           + +LV+R  +               ++  
Sbjct: 723 AHMLFQAPVSEILDWDGDKIVGVTRW--LGRVHDLVARIAATTPSSATPVPTPRAYFEST 780

Query: 375 ---------GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEV 424
                     M P   A  ++D ++     R +  +  + +    ++  ++ +++L + +
Sbjct: 781 TTTTPDAISTMTPQQLAQWDADVAVWRDVQRTITSVTTSYERVYALNTVVSDLMALANSI 840

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILFVADEN 483
                            DRA+ +        +  L  ++    P  A + + +L    E 
Sbjct: 841 ----------------QDRAALLSDAVRRPAVSALLRMMAPITPAFAEECWAMLHGGGEG 884

Query: 484 RCFQSLDQRLKPGFMLHKT---FDPIFPR 509
                     K  F +         + PR
Sbjct: 885 GGGSMFRGEGKAVFPVVDGSLELPALQPR 913


>gi|139473022|ref|YP_001127737.1| leucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166231648|sp|A2RCB2|SYL_STRPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134271268|emb|CAM29484.1| leucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 100/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHLETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|50913539|ref|YP_059511.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|60390672|sp|Q5XE35|SYL_STRP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50902613|gb|AAT86328.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 99/316 (31%), Gaps = 82/316 (25%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCFQSLDQRLK 494
            + E+  +       K
Sbjct: 750 ASGESISYVPWPSYDK 765


>gi|89099648|ref|ZP_01172522.1| leucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085591|gb|EAR64718.1| leucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 805

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +   Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KGKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRVKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   FR     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTKKNIDTFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  +++AY D+LL 
Sbjct: 148 AYIDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEELDWPESLKDMQRNWIGRSE 226



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 61/412 (14%), Positives = 139/412 (33%), Gaps = 61/412 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +     I +    GDI K  Y+G     +  + +    ++ + K  +    
Sbjct: 341 HDERDYEFAKEFSLPIKEVVAGGDIEKEAYTGDGEHVNSGFLDGLQKEEAISKAIEWLEE 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                         + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 KGIGTKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTMTAVPESELPLMLPKTTEIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKA----K 254
            ++    I    +                M  W  +   YL      +    + A    +
Sbjct: 461 GESPLANIDEWVNVTDPETGKKGRRETNTMPQWAGSCWYYLRYIDPKNENAIADADLLKE 520

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           + P D+++ G +    H +Y   +         +S   P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVSTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P E++E  G D LR + +          +  +GL         +G    + R  
Sbjct: 581 KGNVVNPDEIVESHGADTLRLYEMFMGPLEASVAWSTNGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +++ D DG + +     E + S+     + ++++ E+ +    + A++Q++  ++E  +
Sbjct: 632 RLLI-DTDGNLHSRIKDAEPESSLEKAYHQTVKKVTEDYEGLRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                  + V  I     +L    P +A ++++ L 
Sbjct: 691 --------------------AETLPVSYIEGFVKMLSPIAPHIAEELWEKLG 722


>gi|221633077|ref|YP_002522302.1| isoleucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156780|gb|ACM05907.1| isoleucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 1059

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 79/448 (17%), Positives = 145/448 (32%), Gaps = 41/448 (9%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGC-----YSGWYSLRDE-AYYNDDEVYKGADGQYYN 151
           T K  H     + + ++ +G +Y+       Y   +    E  +   DE +   D     
Sbjct: 358 TGKHVHSVAETIAQDLAQRGLLYRREPYLHRYPTCWRCGTELVFRLVDEWFIAVDPWREK 417

Query: 152 AQH--NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL--PIERRNEVISFVKSGLKDL 207
                  V+W+ E G    L   ++           + L  PI +  E   F   G ++ 
Sbjct: 418 VMEAARQVRWIPEFGLERELDWLRNMDDWMISKKRYWGLALPIWQCGECGWFDVIGSEEE 477

Query: 208 SLSRKTFDWGIKIPDDPQ----------------------YIMYVWIDALTNYLTTTGYL 245
              R    W       P                        +   W+DA     +T  Y 
Sbjct: 478 LRERAVEGWERFEGHTPHRPWIDAVKIRCEQCGSIASRIPDVGNPWLDAGIVPFSTLRYR 537

Query: 246 DNPDGSKAKFWPADLHVI---GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
            +      +++P D       G+    F+++   + +L+   P+   +        KGE+
Sbjct: 538 HDRAYW-QEWFPVDFITESFPGQFRNWFYSLLAQSTVLTGQAPMKTCLGFALLRDEKGEE 596

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KS GN I   E  E  GVD +R +L  +    ++  +    L +     L     +  
Sbjct: 597 MHKSKGNAIWFDEAAERAGVDVMR-WLYLKHNPAQNLNFGWRLLDEVRRTFLLPLWNSYA 655

Query: 363 SRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +    L  +         G  T  D  IL+   +V+  +RE +Q+     A   +   
Sbjct: 656 FFANYARLDGFHPAQHDVPLGERTLLDRWILARLQQVIATVRERIQDYDSMNAARALQDF 715

Query: 421 V--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V     + Y    +    K  +    +       EV+  L  LL  F+P     ++  L 
Sbjct: 716 VVEDLSNWYIRRNRRRFWKTESDQDKAAAYLTLYEVLVTLTKLLAPFIPFTTELMYQNLV 775

Query: 479 VADENRCFQSLDQRLKPGFMLHKTFDPI 506
              + +  +S+     P   L K  D +
Sbjct: 776 RRVDPQAPESVHLTDYPEADLTKLDDEL 803



 Score = 43.6 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 43/150 (28%), Gaps = 19/150 (12%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA---------- 65
            N    + HA+     D   RF+ + G    +  G D  G  +    +            
Sbjct: 52  ANNPMGVHHAWGRTYKDFYQRFYTMLGYRQRYQNGFDCQGLWVEVEVERELGFTSKRDIE 111

Query: 66  -------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDK 116
                      K  V   S    + +  L   + +D+   T    ++       K     
Sbjct: 112 AYGIDRFVEKCKERVFTYSAIQTEQSKRLGYFMDWDNSYYTLSDENNYAIWHFLKVCHQN 171

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           G IY G     +  R     ++ EV +G  
Sbjct: 172 GWIYHGYDVMPWCPRCATGLSEMEVSEGYK 201


>gi|212693401|ref|ZP_03301529.1| hypothetical protein BACDOR_02917 [Bacteroides dorei DSM 17855]
 gi|237726966|ref|ZP_04557447.1| isoleucyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265756529|ref|ZP_06090735.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664045|gb|EEB24619.1| hypothetical protein BACDOR_02917 [Bacteroides dorei DSM 17855]
 gi|229433822|gb|EEO43899.1| isoleucyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|263233717|gb|EEZ19332.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 1162

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 102/270 (37%), Gaps = 14/270 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y            ++PAD    G D     F  ++
Sbjct: 623 KPMKREADLIDVWFDSGAMPYAQLHYPFENKEIVDNRTYYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGAIEQYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D DG+ + V       + N  S        D   Y           E D  IL
Sbjct: 743 PWDNLKFDTDGVDE-VRRKFFGTLYNTYSFFALYANVDGFAYQEAEVPVNERPEIDRWIL 801

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           SV + +++ +     +    +A   +   V++   + Y   + ++ W    +  D+ S  
Sbjct: 802 SVLNSLVKNVDACYNDYEPTKAGRLITDFVNDNLSNWYVRLNRKRFWGNAMS-QDKLSA- 859

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +  +A L+    P  A++++  L
Sbjct: 860 YQTLYTCLETVARLMAPVAPFYADRLYTDL 889



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +  ++   T 
Sbjct: 94  VELGVEKALHITKEDIGKTISVAEYNAACRKDVMKFTKEWTDLTHKMGYWVDLENPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++ +KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDITVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|225867757|ref|YP_002743705.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511552|sp|C0MET9|SYL_STRS7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225701033|emb|CAW97815.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLAD 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++         K W P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDKQLADKDLLKQWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVDKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+         G 
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLE---------GA 657

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++       ++ + E ++    + A+AQ++
Sbjct: 658 RKFLDRVYRLIT--------TKEIVAENSGALDKAYHETVKAVTEQIEGMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D+            +    LL  F P L  +++  L 
Sbjct: 710 IFVNAANK--------------EDKLYVAYA------KGFVQLLAPFAPHLGEELWQSLT 749

Query: 479 VADENRCFQSLDQ 491
            + ++  + +   
Sbjct: 750 ASGQSISYVAWPT 762


>gi|15900189|ref|NP_344793.1| leucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657179|ref|ZP_01407956.1| hypothetical protein SpneT_02001607 [Streptococcus pneumoniae
           TIGR4]
 gi|32171579|sp|Q97SS0|SYL_STRPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14971724|gb|AAK74433.1| leucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  TSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 205

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + +   I
Sbjct: 206 DLDELDWSESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|322412788|gb|EFY03696.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGSGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPDYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 107/316 (33%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPNNDQALADPELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGASYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T    TE+  ++  V +  ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLVT--------TKEIVTENSGTLDKVYNETVKAVTEQIETMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K N         + V+  +    L+  F P L  +++ ++ 
Sbjct: 710 IFVNAAN------------KENQ--------LFVDYAKGFVQLIAPFAPHLGEELWQMIT 749

Query: 479 VADENR---CFQSLDQ 491
            +DE+     + + D+
Sbjct: 750 QSDESIAHVAWPTWDE 765


>gi|300681548|emb|CBH32645.1| leucyl-tRNA synthetase, putative, expressed [Triticum aestivum]
          Length = 965

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             R K YI     YP+    H+GH       D+L+RF R+ G +VL   G D  G    +
Sbjct: 85  TSRPKCYILDMFPYPSGAGLHVGHPLGYTATDILSRFKRMKGFNVLHPMGWDAFGLPAEQ 144

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K    +N  +FR     L  SY  D  I TTE  ++   + ++ ++  +G 
Sbjct: 145 YAIQTGTHPKTTTARNIDHFRTQLKSLGFSYDWDREISTTEPAYYKWTQWIFLQLLKRGL 204

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G           PV       +  R+++Y D+LL 
Sbjct: 205 AYQAEVPVNWCPALGTVLANEEVIDG----VSERGGYPVIRKPMRQWMLRITSYADRLLE 260

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 261 DLDDLDWPESIKEMQRNWIGRSE 283



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 33/181 (18%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNVI+P +V+ E G D+LR + +          +   G++         G+   
Sbjct: 725 KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIE---------GVHRF 775

Query: 362 VSRSVSMILKDY--DGMIPTPGAFTESDESI--LSVCSRVLQEIRENMQNQLIHRALAQV 417
           + R+  +++     DG        T+ + +   L V  + +  + E +Q    + A++ +
Sbjct: 776 LGRTWRLVVGAPLPDGSYKDGTTATDVEPTFEQLRVLHKCIARVSEEIQETRFNTAISAM 835

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+   ++    +P    K+              VI    +LL  F P LA +++  L
Sbjct: 836 MEFVNAAYKW--DTQP----KS--------------VIDSFVLLLAPFAPHLAEELWFRL 875

Query: 478 F 478
            
Sbjct: 876 G 876


>gi|323343130|ref|ZP_08083361.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463194|gb|EFY08389.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 800

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K Y+     YP+    H+GH       DV+AR+ R++G +VL   G D  G    + A 
Sbjct: 31  PKYYVLDMFPYPSGNGLHVGHPRGYTATDVIARYKRMNGFNVLHPMGWDAFGLPAEQFAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     F  QN  +F D    L +SYD    I TT+  ++   + ++ K+ D G  Y 
Sbjct: 91  KTGNHPNEFTKQNIAHFTDQIKSLGLSYDWSREISTTDPGYYKWTQWIFTKLYDMGLAYV 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         ++EV  G            V  M    +  +++ Y D+LL   +
Sbjct: 151 DEKPVNFCPELGTVLANEEVIDGKSEVGGFD----VIRMPMRQWVLKITEYADRLLEDLD 206

Query: 182 SHPEFILPIERRNEVISFVK 201
                    E +   I   +
Sbjct: 207 LVEWPDSTKEMQINWIGRSE 226



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 47/262 (17%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D    K W P DL++ G +    H +Y   +    
Sbjct: 490 PQWAGSCW--YYLRYIDPENNEAIGDPELLKHWMPVDLYMGGSEHAVLHLLYARFWHKVL 547

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNV++P +++E  G DALR + +    
Sbjct: 548 FDLGVVDTKEPFGKLYHQGMILGANNEKMSKSRGNVVNPDDIVESHGADALRVYEMFMGP 607

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL         +GI   + R   ++++         G+          V 
Sbjct: 608 LDGAIAWSTRGL---------DGIRKWLDRVYRLMVESDKISETNDGSLDF-------VY 651

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ +Q++  +++   ++ A++Q++  V+E  +                       +  E 
Sbjct: 652 NQTVQKVTHDIETFGMNTAISQLMIFVNEAYK--------------------AETLYKEY 691

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
                 +L  F P L  ++++I
Sbjct: 692 ALGFIKMLACFAPHLGEELYEI 713


>gi|251783405|ref|YP_002997710.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392037|dbj|BAH82496.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323128154|gb|ADX25451.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPDYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 108/316 (34%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPKNDQALADPELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLVT--------TREIVAENSGALDKVYNETVKAVTEQIETMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P L  +++ ++ 
Sbjct: 710 IFVNAAN------------KEDQ--------LFVDYAKGFVQLIAPFAPHLGEELWQMIT 749

Query: 479 VADENR---CFQSLDQ 491
            +DE+     + + D+
Sbjct: 750 QSDESIAHVAWPTWDE 765


>gi|225026292|ref|ZP_03715484.1| hypothetical protein EUBHAL_00533 [Eubacterium hallii DSM 3353]
 gi|224956400|gb|EEG37609.1| hypothetical protein EUBHAL_00533 [Eubacterium hallii DSM 3353]
          Length = 1052

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 84/256 (32%), Gaps = 5/256 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+         Y         + +PA       D     F+++   + LL    
Sbjct: 526 VIDCWFDSGAMPFAQHHYPFENKELFEQQFPAQFISEAVDQTRGWFYSLLAESTLLFNKA 585

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +         G+K+SKS GN +DP + +E+ G DA+R++     A      +  D
Sbjct: 586 PYKNVIVLGHVQDENGQKMSKSKGNAVDPFDALEQHGADAIRWYFYSNSAPWLPNRFHAD 645

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            + +     +           +   + ++D           +  D+ +LS  +  ++ + 
Sbjct: 646 AVTEGQRKFMGTLWNTYAFYVLYANIDEFDPTKYSLEYDKLSVMDKWLLSRLNSCVKTVD 705

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           + + N  I      + + V ++ + Y    +     K                +      
Sbjct: 706 DCLANYKIPETTKALQAFVDDMSNWYVRRSRQRFWAKGMEQDKINAYMTLYTALVTFIKA 765

Query: 462 LQAFVPKLANKIFDIL 477
               +P +   I+  L
Sbjct: 766 SAPMIPFMTEDIYQNL 781



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 51/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N +PHIGH    +I D++ R+  + G  V    G D HG  +    +         
Sbjct: 47  PPTANGKPHIGHVLTRVIKDMIPRYRTMKGYMVPRKAGWDTHGLPVELEVEKKLGLDGKE 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         K  V +    + D +  +      D+   T      ++     K I
Sbjct: 107 QIEEYGLDPFITQCKESVWKYKGMWEDFSKTVGFWADMDNPYVTYNDNFIESEWWALKTI 166

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG +YKG     Y  R     +  EV +G  
Sbjct: 167 WDKGLLYKGFKIVPYCPRCGTPLSSHEVAQGYK 199


>gi|168485977|ref|ZP_02710485.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570909|gb|EDT91437.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|312385678|gb|EFR30111.1| hypothetical protein AND_00481 [Anopheles darlingi]
          Length = 1036

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 132/423 (31%), Gaps = 97/423 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + V+ + +  ++ + S    K      S    I P   R     ++   ++D  +
Sbjct: 439 CSRSKDIVEPLIKPQWYVKCSEMASKATEAVRSGELTITPEVHRKIWYHWMDE-IRDWCV 497

Query: 210 SRKTFDWGIKI------PDDPQY------------------------------------- 226
           SR+   WG +I        DP                                       
Sbjct: 498 SRQ-LWWGHRIPAYQVVFKDPSKAPKDLSDENRWFVGRSEAEALSKAATALKVDKSLITL 556

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
                ++  W  +     +  G+ DN D  K  F+P  L   G DIL F    + +    
Sbjct: 557 RQDEDVLDTWFSSGLFPFSVFGWPDNTDDLK-LFYPTTLLETGHDILFFWVARMVFFGQT 615

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--------------------- 318
           L   LP  +           G K+SKSLGNVIDP++VI                      
Sbjct: 616 LLGKLPFREVFLHPMVRDAHGRKMSKSLGNVIDPMDVIMGISLEGLHQQLLDSNLDPREV 675

Query: 319 ----------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                           E G DALR+ L   +   +D   D + ++        N + N  
Sbjct: 676 EKAKAGQKQDYPNGIPECGTDALRFALCAYMTQARDINLDINRVQG--YRFFCNKLWNAT 733

Query: 363 SRSVSMI--LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++      + YD +    G+    D  ILS  +  ++      +     +A     + 
Sbjct: 734 KFALMYFQGAETYDIITTLDGSEGNIDRWILSRLAGCIEVSNRGFEKYEFAQATNACYNF 793

Query: 421 V--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 D Y +  K    +  + +R ++        +     LL  F+P +  +++  L 
Sbjct: 794 WLYDLCDVYLECLKS-VFQTGDENRKASARRTLYTCLNLGLKLLSPFMPFITEELYQRLP 852

Query: 479 VAD 481
             D
Sbjct: 853 RGD 855



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 19/146 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  +           H+GHA    I D + R+HR+ G   L+  G D  G       +
Sbjct: 111 KGQFVMVIPPPNVTGSLHLGHALTNAIEDAITRWHRMKGRTTLWVPGCDHAGIATQVVVE 170

Query: 64  NAGVTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                 +                  + ++           L     +D    T + +   
Sbjct: 171 KKLWREQQQTRHDLGREKFIEKIWQWRNEKGDRIYHQLKKLGSSFDWDRACFTMDPKLCK 230

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSL 130
                + ++ +KG IY+      +S 
Sbjct: 231 AVTEAFVRMHEKGLIYRSSRLVNWSC 256


>gi|329116079|ref|ZP_08244796.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906484|gb|EGE53398.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    +
Sbjct: 29  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 149 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEEVDWPESIKDMQRNWI 224



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 105/311 (33%), Gaps = 82/311 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDQALADPELLKEWLPVDMYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 547 KVLYDLGVVPTKEPFQKLYNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+EE G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEEFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E+  ++  V    ++ + E + +   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIIAENSGALDKVYHETVKAVTEQIDSMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P L  +++ +L 
Sbjct: 710 IFVNAAN------------KEDQ--------LFVDYAKGFVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRCFQSL 489
            + ++  +++ 
Sbjct: 750 SSGQSLTYEAW 760


>gi|94987780|ref|YP_595881.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991651|ref|YP_599750.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|161936127|ref|YP_281511.2| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|123080438|sp|Q1JNR2|SYL_STRPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123382351|sp|Q1JDV2|SYL_STRPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94541288|gb|ABF31337.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545159|gb|ABF35206.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 98/308 (31%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|71902811|ref|YP_279614.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123761452|sp|Q48VJ7|SYL_STRPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71801906|gb|AAX71259.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 100/316 (31%), Gaps = 82/316 (25%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++ +L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRCFQSLDQRLK 494
            + E+  +       K
Sbjct: 750 ASGESISYVPWPSYDK 765


>gi|76788163|ref|YP_330587.1| leucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77406149|ref|ZP_00783221.1| leucyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|123744499|sp|Q3JYR6|SYL_STRA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76563220|gb|ABA45804.1| leucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77175229|gb|EAO78026.1| leucyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 99/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITKENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++ +L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|323464155|gb|ADX76308.1| leucyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 810

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+L+R+ R+ G +VL   G D  G    + 
Sbjct: 36  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMQGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N + F+     L  SY  D  + TT+  ++   + ++ ++  KG  
Sbjct: 96  ALDTGNDPAEFTKRNIQTFKRQIQELGFSYDWDREVSTTDPEYYKWTQWIFIQLYKKGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +        +++EV  G           PV     + +  +++ Y D+LL  
Sbjct: 156 YIDEIPVNWCEALGTVLSNEEVVDG----VSERGGYPVVRRPMKQWVLKITEYADRLLED 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            ++        + +   I   +
Sbjct: 212 LDTLDWPESIKDMQRNWIGRSE 233



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 110/289 (38%), Gaps = 46/289 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 497 PQWAGSCW--YYLRYIDPKNDQMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 554

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +  + P  K +F+ G IL +G EK+SKS GNV++P +++   G D LR + +   
Sbjct: 555 YDLGIVPTSEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVRSHGADTLRLYEMFMG 613

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + +   +    T         ++ +V
Sbjct: 614 PLEASIAWSENGL---------DGSRRFLDRVWRLFV--TEDSQLTDKVIEGDTPALQTV 662

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++++ E+ ++   + A++Q++  ++E  +                 A  +     E
Sbjct: 663 YHQTVKKVTEDFESLSFNTAISQLMVFINECYK-----------------ADNISKAYAE 705

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
                  +L    P +  +++ IL        + + S D  L    ++ 
Sbjct: 706 GF---VKMLAPIAPHVGEELWSILGHDTTITYQPWPSFDPSLLEEDVVE 751


>gi|148987995|ref|ZP_01819458.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147926459|gb|EDK77532.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNATN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|186476349|ref|YP_001857819.1| valyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184192808|gb|ACC70773.1| valyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 957

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 78/548 (14%), Positives = 164/548 (29%), Gaps = 106/548 (19%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFTTGT-------DEHGQKIAKAAQNAGVTTKVF 72
           E ++ DV         R+ +L G +V             D++  +              F
Sbjct: 225 ETMLGDVAVMVHPEDERYAKLIGQNVKLPLTDREIPIIADDYVDREFGTGVVKVTPAHDF 284

Query: 73  VDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD 132
            D        +  +  ++ D  I       +        +     D+             
Sbjct: 285 NDYQVGQRHKLPQIEILTLDAKINDNAPEKYRGMDRFDARKQVVADLEAIGLLESVKPHK 344

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
                 D      +    +     +     EG F    +  +  L    +     +P   
Sbjct: 345 LMVPRGDRTGVAIEPMLTDQWFVAMSKPAPEGTFNPGKSIAETALDVVRNGQIKFVPENW 404

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------------- 221
                 +++  ++D  +SR+   WG +IP                               
Sbjct: 405 TTTYYQWLE-NIQDWCISRQ-LWWGHQIPAWYGESGEIFVAKTEEEARAKANAQGYKGGL 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
              + ++  W  +     ++ G+ D+     A   P+ + V G DI+ F    +      
Sbjct: 463 KRDEDVLDTWFSSALVPFSSLGWPDHTPDLSAFL-PSSVLVTGFDIIFFWVARMVMMTTH 521

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------- 319
            +  +P             +G+K+SKS GN +DPI++++                     
Sbjct: 522 FTGKVPFDTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 581

Query: 320 -----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 582 STIEKKTRKEFPNGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 638

Query: 363 SRSVSMILKDYDGMIPTPGA-------------FTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     PGA             F+++D  I+S+  RV  E+ +   +  
Sbjct: 639 TRFVLMNCEGHDCGFSKPGACQPGDCGPGGYTDFSQADRWIVSLLQRVESEVEKGFADYR 698

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 699 FDNVANALYKFVWDEYCDWYLELAKV-QIQTGTPEQQRATRRTLLRVLEAVLRLAHPVIP 757

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 758 FITEALWQ 765



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 38  GRKNFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIVV 97

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  Q+          L   I +     T + +   
Sbjct: 98  ERQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITGQVRRLGASIDWSREYFTMDDKMSA 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ ++ ++G IY+G     +        +D EV    +       H P+
Sbjct: 158 AVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGSLWHIHYPL 210


>gi|21909670|ref|NP_663938.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895049|ref|NP_801399.1| leucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|32171567|sp|Q8K8S1|SYL_STRP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21903853|gb|AAM78741.1| putative putative leucyl-tRNA synthetase [Streptococcus pyogenes
           MGAS315]
 gi|28810294|dbj|BAC63232.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 833

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++ Y ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITVYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 98/308 (31%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|315428000|dbj|BAJ49589.1| isoleucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 1062

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 21/292 (7%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           +++  WID+   +  +            K +P D      D     F+ + + + LL+  
Sbjct: 517 FVLDTWIDSGVAFYASID-ALRNTELFKKLFPYDFITEAIDQTRGWFYTLLFTSTLLTGK 575

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    +     +   G+K+SKS GNVI   +     GVD LR +LV +        +  
Sbjct: 576 APFKSVLNQGHVLDEFGKKMSKSRGNVIWAEDAFNTYGVDPLRIYLVSKAEPWSTINFVP 635

Query: 344 DGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGA----FTESDESILSVCSRVL 398
             +  R  A+  N + N+ + +     L  +D  I    +        D+ ILS  + ++
Sbjct: 636 SEV--RETAEDLNILWNIFAFASTYQKLDKFDPRIHKLTSYLHLLRPEDKWILSRVNDLV 693

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDR-YFDAQKP--WELKKTNPDRASTVLYVTVEV 454
            ++   ++   IHRA+ +++S + E + R Y  + +   W   +T P++ +        V
Sbjct: 694 AKVTNYLEEMEIHRAVREIMSFIVEDLSRTYLRSVRRLAWTEAET-PEKMAA-YACLHYV 751

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRC-----FQSLDQRLKPGFMLHK 501
           +R+  +LL  F P  A  ++ +     +        +  LD  L    ++ +
Sbjct: 752 LRKTLLLLAPFAPYTAEILYQLQKTETDKESIHLENWPQLDTALYSPKIIEQ 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E             N   HIGH    +  D++ R+  + G +V    G D  G      
Sbjct: 37  SEGPLFSFLEGPPTVNGYMHIGHTRGRVYKDIVLRYKTMRGYNVWRRGGWDCQGLPTEIE 96

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     T                    VD    ++R  ++ L   + YD    T    +
Sbjct: 97  VEKRLGITSKRDVEKIGLERFVEEANKVVDHYLSHWRRASERLGLWLDYDRAYETRRDEY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +    L KK  + GD+ +           E   +  E+ +G +
Sbjct: 157 MEHVWHLLKKAHEMGDLVESLRVVPTCPHCETALSQHEMAQGYE 200


>gi|319892813|ref|YP_004149688.1| Leucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162509|gb|ADV06052.1| Leucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 810

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+L+R+ R+ G +VL   G D  G    + 
Sbjct: 36  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMQGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N + F+     L  SY  D  + TT+  ++   + ++ ++  KG  
Sbjct: 96  ALDTGNDPAEFTKRNIQTFKRQIQELGFSYDWDREVSTTDPEYYKWTQWIFIQLYKKGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +        +++EV  G           PV     + +  +++ Y D+LL  
Sbjct: 156 YIDEIPVNWCEALGTVLSNEEVVDG----VSERGGYPVVRRPMKQWVLKITEYADRLLED 211

Query: 180 YESHPEFILPIERRNEVISFVK 201
            ++        + +   I   +
Sbjct: 212 LDTLDWPESIKDMQRNWIGRSE 233



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 109/289 (37%), Gaps = 46/289 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 497 PQWAGSCW--YYLRYIDPKNDQMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 554

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +  + P  K +F+ G IL +G EK+SKS GNV++P +++   G D LR + +   
Sbjct: 555 YDLGIVPTSEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVRSHGADTLRLYEMFMG 613

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + +   +    T         ++ + 
Sbjct: 614 PLEASIAWSENGL---------DGSRRFLDRVWRLFV--TEDSQLTDKVIEGDTPTLQTA 662

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++++ E+ ++   + A++Q++  ++E  +                 A  +     E
Sbjct: 663 YHQTVKKVTEDFESLSFNTAISQLMVFINECYK-----------------ADNISKAYAE 705

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
                  +L    P +  +++ IL        + + S D  L    ++ 
Sbjct: 706 GF---VKMLAPIAPHVGEELWSILGHDTTITYQPWPSFDPSLLEEDVVE 751


>gi|194290340|ref|YP_002006247.1| valyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|193224175|emb|CAQ70184.1| valine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 955

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 116/370 (31%), Gaps = 59/370 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H       +  N  +   +      + +  +  
Sbjct: 406 PENWISTYNQWLGNIQDWCISRQLWWGHQIPAWYDDAGNCFVGRTEEEALAKAKAAGSTG 465

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
                    + ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +
Sbjct: 466 A----LRREEDVLDTWFSSALVPFSSLGWPEETPELK-HFLPSSVLVTGYDIIFFWVARM 520

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P             +G+K+SKS GN +DP+++I+               
Sbjct: 521 VMMTKHFTGKVPFHTVYVHGLVRDSEGKKMSKSEGNTLDPVDLIDGIDLDTLLKKRTTGL 580

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+        G++  +D    +     +  N
Sbjct: 581 RRPKDAPKIEKKTKKEFPEGIPAFGADALRFTFASLATLGRNINFDTGRCEG--YRNFCN 638

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPG---------AFTESDESILSVCSRVLQEIRENMQN 407
            + N  +R V M  + +D  +              F+++D  I+S+  RV  E+ +    
Sbjct: 639 KLWN-ATRFVLMNTEGHDCGMGPCNQDCGPDGYLDFSQADRWIVSLLQRVEAEVEKGFAE 697

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                    +   V +   D Y +  K      T   + +T     + V+  +  L    
Sbjct: 698 YRFDNIANAIYKFVWDEYCDWYLELAKVQIQNGTEAQQRAT-RRTLLRVLETVLRLAHPI 756

Query: 466 VPKLANKIFD 475
           +P +  +++ 
Sbjct: 757 IPFITEELWQ 766



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 71/222 (31%), Gaps = 22/222 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR  R+ G + L+  GTD  G       +
Sbjct: 39  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMLGANTLWVPGTDHAGIATQIVVE 98

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                             T KV+  +       +R  R M   +D S + F  T      
Sbjct: 99  RQLEGQGVSRHDLGREKFTEKVWAWKEESGSTITRQVRRMGASIDWSREYF--TMSPEMS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                ++ ++ ++G IY+G     +        +D EV    +         P+   + +
Sbjct: 157 KAVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVEEEGSLWHIRYPLVEADAK 216

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
           G    L+    +  +        + P + R   +      L 
Sbjct: 217 GGLTHLTVATTRPETMLGDVAVMVHPEDERYAHLIGKSVHLP 258


>gi|89890000|ref|ZP_01201511.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89518273|gb|EAS20929.1| isoleucyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 1136

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 101/270 (37%), Gaps = 7/270 (2%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           ++ VW D+ +   +   Y        + +   AD    G D     F+ ++  A ++S +
Sbjct: 606 LIDVWFDSGSMPYSQWHYPFENKEQVENQLRKADFIAEGVDQTRGWFYTLHAIATMISDD 665

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +     V +   +   G+K+SK LGN  DP E + + G DA R+++V       +  +D 
Sbjct: 666 VAYKNVVSNGLVLDKNGQKMSKRLGNAADPFETLGKYGADATRWYMVSNANPWDNLKFDL 725

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEI 401
           DG+ +                S+   +  +             E D  +LS  + ++++ 
Sbjct: 726 DGITEVQRKFFGTLYNTYSFFSLYANVDGFTYSEANIPLEERPEIDRWVLSELNTLIKDT 785

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               ++    +A   + + V+E   + Y    +    K T               ++ +A
Sbjct: 786 TAFYEDYEPTKAARAITTFVTENLSNWYVRLCRRRFWKGTYEKDKIAAYQTLYTCLKTVA 845

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSL 489
            L     P   ++++  L    E+   +S+
Sbjct: 846 QLGAPIAPFFMDQLYRDLTSVCESDASESV 875



 Score = 53.6 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 50/148 (33%), Gaps = 23/148 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  E           N  P I H     I D+  RF    G  V    G D HG  +   
Sbjct: 39  EGNEPFIFFEGPPSANGLPGIHHVMGRTIKDLFCRFKTQQGYQVNRKAGWDTHGLPVELG 98

Query: 62  AQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
            + A   TK                      + D  S+   DM   +D+  D +I T + 
Sbjct: 99  VEKALEITKEDIGTKISVEDYNQACKDAVLKYTDIWSKLTDDMGYWVDME-DPYI-TYKS 156

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWY 128
           ++ ++   L K+I  K  +YKG     Y
Sbjct: 157 KYMESVWWLLKQIYSKDLLYKGYTIQPY 184


>gi|303255050|ref|ZP_07341126.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597880|gb|EFL64950.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 833

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|221231157|ref|YP_002510309.1| leucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225853856|ref|YP_002735368.1| leucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782516|sp|B8ZKS5|SYL_STRPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782839|sp|C1CC47|SYL_STRZJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|220673617|emb|CAR68104.1| leucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722605|gb|ACO18458.1| leucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 833

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|149017948|ref|ZP_01834407.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147931512|gb|EDK82490.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 833

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 105/316 (33%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKSVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENR---CFQSLDQ 491
              E+     + + D+
Sbjct: 750 ATGESISYVTWPTWDE 765


>gi|22538192|ref|NP_689043.1| leucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25012050|ref|NP_736445.1| leucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76797851|ref|ZP_00780115.1| leucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77412992|ref|ZP_00789195.1| leucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|54039681|sp|P67515|SYL_STRA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042039|sp|P67514|SYL_STRA3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22535102|gb|AAN00916.1|AE014284_11 leucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413593|emb|CAD47671.1| leucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76586811|gb|EAO63305.1| leucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77161004|gb|EAO72112.1| leucyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 833

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 99/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++ +L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRCF 486
            + ++  +
Sbjct: 750 ASGQSISY 757


>gi|293374330|ref|ZP_06620657.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646993|gb|EFF64976.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 811

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 3/209 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 28  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRMKRMQGYRVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A N G   + F D N   FR+    L  SY  D  + TT+ +++   + ++ ++ + G 
Sbjct: 88  YALNTGNDPREFTDININTFRNQIQSLGFSYDWDKELNTTDPKYYKWTQWIFTQLYNMGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                    +         ++EV             +PV     + +  +++ Y ++LL 
Sbjct: 148 AEIKDIEVNWCEGLGTVLANEEVLNVDGKMVSERGEHPVIKKPMKQWVLKITHYAERLLE 207

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDL 207
             +         + +   I   +  L + 
Sbjct: 208 DLDGLDWTESIKDMQRNWIGKSEGALINF 236



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 40/246 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISK 305
           ++ P DL++ G +    H +Y   +         +    P  +       +    EK+SK
Sbjct: 527 EWLPVDLYIGGAEHAVLHLLYARFWHKVLYDLGIVETKEPFQRLFNQGMILGENNEKMSK 586

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++E  G D LR + +          +  +GL         +G    + R 
Sbjct: 587 SKGNVVNPDDIVESHGADTLRLYEMFMGPLDAAIAWSTEGL---------DGSRRFLDRV 637

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             + +              E+D  +  V +  ++++ E+ +    + A+AQ++  ++E  
Sbjct: 638 WRLFV--TPEHTLAEKVVAENDGKLDKVYNETVKKVTEDYEKLSFNTAIAQMMIFINESY 695

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +                       +  E +     LL    P +  +I+ +L   +E   
Sbjct: 696 K--------------------ATSIPREYVEGFVKLLNPIAPHMTEEIWSVLG-HEETMT 734

Query: 486 FQSLDQ 491
           +++   
Sbjct: 735 YEAWPT 740


>gi|163815524|ref|ZP_02206897.1| hypothetical protein COPEUT_01689 [Coprococcus eutactus ATCC 27759]
 gi|158449161|gb|EDP26156.1| hypothetical protein COPEUT_01689 [Coprococcus eutactus ATCC 27759]
          Length = 821

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 87/255 (34%), Gaps = 16/255 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      
Sbjct: 47  SKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENY 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K     N   F+     L  S+  D  I TT+  ++   + ++ K+   G  
Sbjct: 107 AIKNKIHPKEVTKTNVARFKKQLHSLGYSFDWDREINTTDPEYYKWTQWIFLKLFKAGLA 166

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV  G          + V    +  +  +++ Y DKL+  
Sbjct: 167 YKKEMPINWCTSCKVGLANEEVVNG----VCERCGSEVVRKVKSEWMLKITDYADKLIEG 222

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +           +   I            +    D+ +K  +D   I     D L    
Sbjct: 223 LDGVDYIERVKVSQKNWIG---------RSTGAEVDFSVKGKEDKLRIYTTRCDTLFGVT 273

Query: 240 TTTGYLDNPDGSKAK 254
                 ++P   K K
Sbjct: 274 YMVVSPEHPILDKYK 288



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 111/340 (32%), Gaps = 61/340 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +PI+           +      +G   L+   
Sbjct: 436 YKLRDWVFSRQRYWGEPIPIVHCDKCGYVPIDESQLPLLLPEVDSYMPTDNGESPLAAMT 495

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y               K+W P D +  
Sbjct: 496 DWVNTTCPCCGGPAKRETDTMPQWAGSSWYFLRYTDPHNTEALASKEALKYWLPVDWYNG 555

Query: 264 GKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +              P  K+      +   GEK+SKS GNV++P +
Sbjct: 556 GMEHTTLHLLYSRFWHKFLYDQGVVPTPEPYQKRTSHGMILGENGEKMSKSRGNVVNPDD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +++  G D LR + +   A      + +DG+K         G    + R   +     D 
Sbjct: 616 IVDVYGADTLRTYEMFIGAFDLAASWSEDGVK---------GCRRFLDRVWKLQDSVTDE 666

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
              +        + + +   +V++++  + +N   + A+A +++L++  D Y        
Sbjct: 667 KGYS--------KDMETKMHQVIKKVSNDFENLKYNTAIAAMMALLN--DFY-------- 708

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            KK           VT +  + L ILL    P +  +++ 
Sbjct: 709 -KKG---------SVTADEFKTLLILLNPVAPHITEELWS 738


>gi|241663639|ref|YP_002981999.1| valyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865666|gb|ACS63327.1| valyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 958

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 128/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +S    ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 379 PEGTRFPGRSIAEVALDAVQSGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 436

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  +     ++ G+  +   
Sbjct: 437 AWYDEAGNVYVGRTEEEAKAQAAAKGYTGALTRDDDVLDTWFSSALVPFSSLGWPADTPE 496

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 497 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFHTVYVHGLVRDSEGKKMSKSEG 555

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 556 NTLDPVDLIDGIALEPLLAKRTTGLRRPKDAPKVEKRTRKEFPDGIPAFGADALRFTFAS 615

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G+   +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 616 LATLGRSINFDPSRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGMQECVGDCGPDGYLH 672

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+++D  I+S+  RV  E+ +   +         +   V +   D Y +  K  +++   
Sbjct: 673 FSQADRWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWYLELAKV-QIQTGT 731

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 732 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 766



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 18/146 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 38  GKPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMSGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        + +Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGVSRHDMGREKFVEKVWEWKEQSGSTITRQVRRMGASIDWEREYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSL 130
               ++ ++ ++G IY+G     +  
Sbjct: 158 AVSDVFVRLYEQGLIYRGKRLVNWDP 183


>gi|269865023|ref|XP_002651778.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063894|gb|EED42278.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 278

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 26/258 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++  +       +  
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIF--LKTIDHFDEKE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWMEEEGYF--FRLSAYQDKLLS 178
            +  +  + + +  D  +          + +      ++ E+      FR S  +     
Sbjct: 128 INQMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQELTNFRCSICKTTPQI 187

Query: 179 YYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRK-TFDWGIKIPD 222
                  F L   +                    +++K  L    ++RK    WG+ +P 
Sbjct: 188 KTTKQLFFNLNELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPL 247

Query: 223 DP--QYIMYVWIDALTNY 238
                 + YVW DA   Y
Sbjct: 248 KEYDDKVFYVWYDAPIGY 265


>gi|209558724|ref|YP_002285196.1| leucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064872|sp|B5XJI9|SYL_STRPZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209539925|gb|ACI60501.1| Leucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTELYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 99/316 (31%), Gaps = 82/316 (25%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCFQSLDQRLK 494
            + E+  +       K
Sbjct: 750 ASGESISYVPWPSYDK 765


>gi|182683235|ref|YP_001834982.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691187|sp|B2ISI0|SYL_STRPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|182628569|gb|ACB89517.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
             D++  + +    
Sbjct: 750 ETDKSISYVAWPTW 763


>gi|148983657|ref|ZP_01816976.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923804|gb|EDK74916.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799401|emb|CBW31937.1| leucyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|224081316|ref|XP_002306367.1| predicted protein [Populus trichocarpa]
 gi|222855816|gb|EEE93363.1| predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 76/419 (18%), Positives = 142/419 (33%), Gaps = 58/419 (13%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            S   D+ +      + +  E+      +    DG+    +  P Q++ E   +      
Sbjct: 437 CSRSNDVVEPMLKPQWFVNCES-LAKQALQAATDGENPKLEFIPKQFLAEWKRWLGNIQD 495

Query: 173 QDKLLSYYESHPEFILPIE----------RRNEVISFVKSGLKDLSLSRKTFD-WGIKIP 221
                  +  H      +             N+     ++  + L+ + + F      I 
Sbjct: 496 WCISRQLWWGHRIPAWYVTLEDDAEKDFGVYNDHWVVGRNEEEALAEASQKFSGKKFDIS 555

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            DP  ++  W  +    L+  G+ D+ D  +  F+P  +   G DIL F    +      
Sbjct: 556 QDPD-VLDTWFSSGLFPLSVLGWPDDTDDLRT-FYPTSVLETGHDILFFWVARMVMLGIQ 613

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L  ++P  K           G K+SKSLGNVIDP+EVI+ + ++ L   L       K+ 
Sbjct: 614 LGGDVPFRKVFLHPMVRDAHGRKMSKSLGNVIDPLEVIDGISLEGLHKRLEEGNLDQKEL 673

Query: 340 FYDKDGLKK--------------------------RVNADL-----ANGIGNLVSRSVSM 368
              K G K+                          ++N D+          N +  +V  
Sbjct: 674 VVAKAGQKQDFPNGIAECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRF 733

Query: 369 ILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
            +  +D     P  F         + ILSV ++ + +    + +  +  A + V S    
Sbjct: 734 AMSKFDIDYTAPINFNLETMPFSCKWILSVLNKAISKAVSALDSYELSYAASTVYSWWQY 793

Query: 423 -EVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D + +A KP      +P      S+        +     LL  F+P +  +++  L
Sbjct: 794 QFCDVFIEAIKP-YFAGDDPAFAFERSSAQETLWICLDSGLRLLHPFMPFVTEELWQRL 851



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 19/159 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA    I D + R+ R+ G + L+  G D  G      
Sbjct: 106 SSKPPFVILLPPPNVTGNLHLGHALTAAIQDTMIRWKRMSGFNALWVPGLDHAGIATQVI 165

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     +  ++  N       L  S D      T ++R 
Sbjct: 166 VEKKLMRERQSTRHDLGREKFVSEVWKWKHEHGGNILKQLRRLGASLDWSRECFTMDERR 225

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++  +G IY+      +        +DDEV
Sbjct: 226 SKAVIEEFVRLFKEGLIYRDLRLVHWDCTLRTAISDDEV 264


>gi|303259306|ref|ZP_07345284.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261062|ref|ZP_07347011.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263390|ref|ZP_07349313.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265555|ref|ZP_07351455.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303267887|ref|ZP_07353689.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301801197|emb|CBW33871.1| leucyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302637899|gb|EFL68385.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639724|gb|EFL70181.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642583|gb|EFL72928.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644995|gb|EFL75242.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302647163|gb|EFL77387.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
             DE+  + +    
Sbjct: 750 ETDESISYVAWPTW 763


>gi|148994596|ref|ZP_01823738.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489731|ref|ZP_02713930.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927126|gb|EDK78164.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183571788|gb|EDT92316.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075921|gb|EGI86388.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|119719048|ref|YP_919543.1| isoleucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524168|gb|ABL77540.1| Isoleucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 1062

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 133/394 (33%), Gaps = 20/394 (5%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND-DEVYKGADGQYYNAQHNP 156
            E R      + W+  +         +    +   E +  +   V        Y+   N 
Sbjct: 390 HEGRIKHRYPVCWRCKTPLVLRATRQWYIRVTQLKERFLEEAGNVDWVPKWAGYSRFRNW 449

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  +    R   +      +        + +  ++E+  F    L+   L R   D 
Sbjct: 450 LEGLR-DWIISRQRYWGTPAPIWVCGSCGHRVVVGSKDELERFAGRKLELRDLHRPWVDQ 508

Query: 217 GIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
            +               ++ VW+D+   +  + GY  N +  +    P DL + G D + 
Sbjct: 509 VVLKCPKCGGEMRRVPDVLDVWLDSGVAFYASLGYPKNEEKFRELM-PVDLIIEGHDQIA 567

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV-IEEVGVDALR 326
             F ++     +     P  + +     +  +G ++ KSLGN ++P +V   E G   + 
Sbjct: 568 GWFFSLLRCGLIAFDRSPYLRVLMHGFALDEQGREMHKSLGNYVEPRQVLEYEYGSRDVF 627

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---- 382
            + V +    +D  +   GL++   +DL          ++ M L  +D  +         
Sbjct: 628 RWFVLKNTVWEDLRFSWRGLEE-TYSDLNILWNVYYFATMYMSLDGFDPALHRLEDYLDR 686

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTN 440
               D  ILS   ++   +  + +   +H+A   + + V       Y    +P    + +
Sbjct: 687 LKPEDRWILSRLGKLASTVTSSFKELNVHKAARDIRNFVVEDLSHWYVRLVRPRVWLEED 746

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +           V+  L +L    +P    KI+
Sbjct: 747 VEEKKLAYVTLYHVLLNLLVLASPILPFTTEKIY 780



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 56/164 (34%), Gaps = 20/164 (12%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP++  PH+G  +  I+ D + RFHR  G  V    G D HG  I   
Sbjct: 40  SKRKYYFLDGPPYPSSSIPHVGTLWNKILKDAIIRFHRASGYSVHDQPGYDCHGLPIEVQ 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                       K F  QN            +S  +D    T    +
Sbjct: 100 IERKLGFKSKKDIEEFGVEKFVEECKSFALQNVEGLSRSFKDFGVSMDWDKPYLTMTDEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   L KK  +KG +  G     +  R E    D EV +  D
Sbjct: 160 IESAWWLVKKAEEKGLLDYGLKVVHWCPRCETTLADYEVTEYRD 203


>gi|57239030|ref|YP_180166.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578971|ref|YP_197183.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819269|sp|Q5HBM8|SYL_EHRRW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57161109|emb|CAH58018.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417597|emb|CAI26801.1| Leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 830

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  GL V    G D  G     AA +  +
Sbjct: 28  YVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGLHVFHPIGWDAFGLPAENAALSYNI 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +V+  +N  N R     + +SY  D    T +  ++   +  +      G  Y+    
Sbjct: 88  SPQVWTRKNIDNMRSQLKSIGLSYNWDKEFATCDAEYYKYEQEFFLDFLKYGLAYRKESL 147

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D+    +++V  G            ++  +   +F +++ +  +LL   +S  +
Sbjct: 148 VNWDPVDQTVLANEQVIDG----RGWRSGAIIEKRKLSQWFLKITDFAAELLDDLKSLNQ 203

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 204 WPEKVKLMQERWIGKSEG 221



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 128/404 (31%), Gaps = 80/404 (19%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            +          G   Q Y     P+ + ++ G            L       +   P++
Sbjct: 398 CKKQVYYRLHDWGISRQRYWGCPIPIIYCKKCGIVPVDKKDLPITLPEDIDFTKSGNPLD 457

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
                  + K         R+T  +                   + Y      +      
Sbjct: 458 NHPTW-KYTKCPSCGADAKRETDTFDT-------------FFESSWYFAAFCGIGKGIDK 503

Query: 252 K--AKFWPADLHVIGKDILRFHAIY--------WPAFLLSANLPL----PKKVFSHGFIL 297
               K  P D ++ G +    H +Y                  P      + +  H   L
Sbjct: 504 DVCNKLLPVDYYIGGIEHAVLHLLYSRFFCRALTRCGYFDVKEPFSSLITQGMVCHSTYL 563

Query: 298 HKG------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            K                         EK+SKS  NV+   ++I++ G D+ R F++ + 
Sbjct: 564 DKYGNYLFPEDGKKMIQEGKYVTVGRAEKMSKSKKNVVHLDDIIDKYGADSARLFILSDT 623

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +  + ++         G+   +++   MI+ DYD +         S +++   
Sbjct: 624 PPERDIEWLDENIE---------GVSRYLNKLWKMIV-DYDQLEQNFVCDNISSDTLEYR 673

Query: 394 CS--RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  ++L +I  +++    + A+A+   L + +                  R S   +V 
Sbjct: 674 INVHKILNDITNDLEFYRFNCAVAKFRELSNVISEMI--------------RLSINHHVV 719

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
            E I  L  +++ F+P +A K++ I+       N+ +  +D +L
Sbjct: 720 SEAIYILIRVVEPFIPHIAEKLWQIVGGQGMLCNQLWPKVDPQL 763


>gi|77408959|ref|ZP_00785681.1| leucyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172422|gb|EAO75569.1| leucyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 99/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++ +L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|255076041|ref|XP_002501695.1| predicted protein [Micromonas sp. RCC299]
 gi|226516959|gb|ACO62953.1| predicted protein [Micromonas sp. RCC299]
          Length = 1060

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 118/381 (30%), Gaps = 53/381 (13%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VK 201
            +  ++    N   W      ++        +    E+  E  +P     ++  +    +
Sbjct: 496 MEPTWFRWLENIRDWCISRQLWWGHRIPAYYVKFEGEAEEECGMPGGSSEKLDRWVIGRE 555

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                    +K       +  D   ++  W  +     +  G+ D      A+F+P  L 
Sbjct: 556 EDEARAEAEKKFPGKAFTLEQDED-VLDTWFSSGLFPFSVFGWPDETP-DLAEFYPTALL 613

Query: 262 VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-- 317
             G DIL F    +      L+  +P  +           G K+SKSLGNVIDP+ VI  
Sbjct: 614 ETGHDILFFWVARMVMMGMKLTGKVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPLHVIEG 673

Query: 318 -----------------------------------EEVGVDALRYFLVREIACGKDGFYD 342
                                               E G DA+R+ LV   A G+D   D
Sbjct: 674 ISLKDLNETLTGGNLDEKEVKKAQQGQAQDYPEGIPECGTDAMRFALVAYTAQGRDINLD 733

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDY----DGMIPTPGAFTESDESILSVCSRVL 398
              +         N + N +  ++  +  DY    + +         + +  L   +  +
Sbjct: 734 VLRVVG--YRHWCNKLWNAIRFAIMNLGDDYKPPEEPLTVNTPGLPPASKWALHRLNSAV 791

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +   + M+      A   V +       D + +  KP  +   +              + 
Sbjct: 792 KTTVDAMEVYDFSNATTGVYAFWQYDVCDVFIELMKP-VMNGADEAAKKATRDTLWTCLD 850

Query: 457 QLAILLQAFVPKLANKIFDIL 477
               LL  F+P +  +++  L
Sbjct: 851 GGLRLLHPFMPFVTEELWQRL 871



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I           HIGHA    I D + R+ R+ G + L+  GTD  G      
Sbjct: 124 TSKPKFVIVIPPPNVTGALHIGHALTNSIQDTIVRWRRMSGYEALWVPGTDHAGIATQTV 183

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +      +                  + +Q      +    L  S D      T ++  
Sbjct: 184 VEKKLQREEGITRHDLGREKFLERVFEWKEQYGGKIFNQLKRLGSSLDWSRERFTMDEML 243

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +  + ++   G +Y+      +  R +   +D EV  
Sbjct: 244 SKAVKEAFVRMHADGLVYRDNRLVNWCCRLKTAISDIEVDY 284


>gi|195124630|ref|XP_002006794.1| GI21262 [Drosophila mojavensis]
 gi|193911862|gb|EDW10729.1| GI21262 [Drosophila mojavensis]
          Length = 1048

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 127/425 (29%), Gaps = 97/425 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   +           S    ILP             G++D 
Sbjct: 452 PICSRSKDVVEPLIKPQWYVSCADMAAAATESVRSGELKILPEHHTKTWY-HWMDGIRDW 510

Query: 208 SLSRKTFDWGIKIP---------------------------------------------- 221
            +SR+   WG +IP                                              
Sbjct: 511 CVSRQ-LWWGHRIPAYHVSFNDASIKASTPDDEQYWIVARSEEEALSKAATRFGVDASKI 569

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ DN       F+P  L   G DIL F    + +  
Sbjct: 570 VLQQDEDVLDTWFSSGLFPFSVFGWPDNTV-DLQTFYPTSLLETGHDILFFWVARMVFFG 628

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------- 318
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 629 QKLMGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIHGISLEGLHKQLIGSNLDPR 688

Query: 319 ------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + ++        N + N
Sbjct: 689 EIEKAKLGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVQG--YRFFCNKLWN 746

Query: 361 LVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++     D  Y+  +       + D  ILS  +  ++      ++       +   
Sbjct: 747 ATKFALLYFTGDELYNTQVTISNQSNQMDTWILSRLAATIEACNAGFESYDFAAVTSACY 806

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D Y +  KP   +  N ++ +         +     LL  F+P +  ++F  
Sbjct: 807 AFWLYDVCDVYLECLKP-IFQSGNAEQQAAARRTLYVCLDYGLRLLSPFMPFITEELFQR 865

Query: 477 LFVAD 481
           L  AD
Sbjct: 866 LPRAD 870



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 21/145 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 129 KFIMVIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 188

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDT 105
                                  +  +      D    L  SYD + R   T + +    
Sbjct: 189 LWREEGLSRHDLGREKFIERIWDWRREKGGRIYDQLKALGSSYD-WTRVNFTMDPKLCRA 247

Query: 106 CRILWKKISDKGDIYKGCYSGWYSL 130
               + ++ ++G +Y+      +S 
Sbjct: 248 VTEAFVRLHEQGTVYRSSRLVNWSC 272


>gi|58699049|ref|ZP_00373891.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534443|gb|EAL58600.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 236

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++EK Y+     YP+ + H+GH     I DV+AR+ R  G +VL   G D  G     A
Sbjct: 24  SKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPAENA 83

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A++  ++ +++  +N  N R     + +SY  +  + T E  ++   +  +      G  
Sbjct: 84  ARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLA 143

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V  G            V+  +   +F +++ + + LL  
Sbjct: 144 YRKESWVNWDPVDQTVLANEQVVDGKG----WRSGAVVEKRKLSQWFLKITDFAEDLLKC 199

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +S   +   ++   E       G
Sbjct: 200 LQSLKNWPEKVKTMQERWIGKSEG 223


>gi|325841283|ref|ZP_08167384.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489964|gb|EGC92311.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 811

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 3/209 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 28  KSKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRMKRMQGYRVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A N G   + F D N   FR+    L  SY  D  + TT+ +++   + ++ ++ + G 
Sbjct: 88  YALNTGNDPREFTDININTFRNQIQSLGFSYDWDKELNTTDPKYYKWTQWIFTQLYNMGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                    +         ++EV             +PV     + +  +++ Y ++LL 
Sbjct: 148 AEIKDIEVNWCEGLGTVLANEEVLNVDGKMVSERGEHPVIKKPMKQWVLKITHYAERLLE 207

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDL 207
             +         + +   I   +  L + 
Sbjct: 208 DLDGLDWTESIKDMQRNWIGKSEGALINF 236



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 40/246 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISK 305
           ++ P DL++ G +    H +Y   +         +    P  +       +    EK+SK
Sbjct: 527 EWLPVDLYIGGAEHAVLHLLYARFWHKVLYDLGIVETKEPFQRLFNQGMILGENNEKMSK 586

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +++E  G D LR + +          +  +GL         +G    + R 
Sbjct: 587 SKGNVVNPDDIVESHGADTLRLYEMFMGPLDAAIAWSTEGL---------DGSRRFLDRV 637

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             + +              E+D  +  V +  ++++ E+ +    + A+AQ++  ++E  
Sbjct: 638 WRLFV--TPEHTLAEKVVAENDGKLDKVYNETVKKVTEDYEKLSFNTAIAQMMIFINESY 695

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +                       +  E +     LL    P +  +I+ +L   +E   
Sbjct: 696 K--------------------ATSIPREYVEGFVKLLNPIAPHMTEEIWSVLG-HEETMT 734

Query: 486 FQSLDQ 491
           +++   
Sbjct: 735 YEAWPT 740


>gi|47458993|ref|YP_015855.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614378|sp|Q6KID2|SYV_MYCMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|47458321|gb|AAT27644.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 839

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 69/345 (20%), Positives = 134/345 (38%), Gaps = 45/345 (13%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE----VISFVKSGLKDLSLSRKTFDWG 217
              +F ++  +   +L   ++  E    +    +    ++        D ++SR+   WG
Sbjct: 353 MPQWFIKMEPFSKMILKKIQNENEDDKKVLFFPKKFENILKIWMQEAHDWNISRQ-LWWG 411

Query: 218 IKI--------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            KI                        Q ++  W  +     +   +    +  K +++P
Sbjct: 412 HKIPAWYDEKGNIKVQTTSPGSNWTQDQDVLDTWFSSGIAPFSFLNWPQKSEFLK-RYYP 470

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             + V   DI+ F    +Y+       N+P  K +        +G K+SKSLGN IDP++
Sbjct: 471 TSVIVTAYDIIFFWVARMYFMGIYSMKNIPFKKALIHGLIRDEQGRKMSKSLGNGIDPMD 530

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D+LR+FL+     G+D  ++ D ++   +  L N I N +SR + M+  D   
Sbjct: 531 LIEKYGADSLRWFLMTNSTPGQDIRFNYDKIESAWS--LINKIWN-ISRYIKMLDSDKKE 587

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
           +IP       ++  IL     +   I E  +         ++   ++E     Y +    
Sbjct: 588 IIPEEIEQN-ANSWILEKFENLKILIYEKSETFEFSVIGKEIFKFINEDFSSVYIEI--- 643

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             +K T+            ++     ILL  F+P L + ++  L 
Sbjct: 644 --IKGTDSKE------FISKIWSNFLILLHPFLPFLTDHLYFELN 680



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 18/137 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + HIGHA+   + D L R  RL G DVL+  GTD  G       
Sbjct: 30  TKKPFSILLPPPNVTGKLHIGHAWNTTLQDFLIRLKRLQGYDVLWLPGTDHAGIATQAKV 89

Query: 63  QNAGVTTK----------------VFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
           +   +  K                 + ++ +   +     L ++ D      T ++  + 
Sbjct: 90  EKRLLDQKIFKSDLTKEELFEKAMDWKNEYANEIKKQWSKLGLALDYKKERFTLDELSNK 149

Query: 105 TCRILWKKISDKGDIYK 121
               ++  +   G IY+
Sbjct: 150 AVNDIFVMLYKDGYIYR 166


>gi|319746032|gb|EFV98311.1| leucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 99/308 (32%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++ +L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|295093793|emb|CBK82884.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Coprococcus sp. ART55/1]
          Length = 805

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 87/255 (34%), Gaps = 16/255 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      
Sbjct: 31  SKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K     N   F+     L  S+  D  I TT+  ++   + ++ K+   G  
Sbjct: 91  AIKNKIHPKEVTKTNVARFKKQLHSLGYSFDWDREINTTDPEYYKWTQWIFLKLFKAGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV  G          + V    +  +  +++ Y DKL+  
Sbjct: 151 YKKEMPINWCTSCKVGLANEEVVNG----VCERCGSEVVRKVKSEWMLKITDYADKLIEG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
            +           +   I            +    D+ +K  +D   I     D L    
Sbjct: 207 LDGVDYIERVKVSQKNWIG---------RSTGAEVDFSVKGKEDKLRIYTTRCDTLFGVT 257

Query: 240 TTTGYLDNPDGSKAK 254
                 ++P   K K
Sbjct: 258 YMVVSPEHPILDKYK 272



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 111/340 (32%), Gaps = 61/340 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +PI+           +      +G   L+   
Sbjct: 420 YKLRDWVFSRQRYWGEPIPIVHCDKCGYVPIDESQLPLLLPEVDSYMPTDNGESPLAAMT 479

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y               K+W P D +  
Sbjct: 480 DWVNTTCPCCGGPAKRETDTMPQWAGSSWYFLRYTDPHNTEALASKEALKYWLPVDWYNG 539

Query: 264 GKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +              P  K+      +   GEK+SKS GNV++P +
Sbjct: 540 GMEHTTLHLLYSRFWHKFLYDQGVVPTPEPYQKRTSHGMILGENGEKMSKSRGNVVNPDD 599

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +++  G D LR + +   A      + +DG+K         G    + R   +     D 
Sbjct: 600 IVDVYGADTLRTYEMFIGAFDLAASWSEDGVK---------GCRRFLDRVWKLQDSVTDE 650

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
              +        + + +   +V++++  + +N   + A+A +++L++  D Y        
Sbjct: 651 KGYS--------KDMETKMHQVIKKVSNDFENLKYNTAIAAMMALLN--DFY-------- 692

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            KK           VT +  + L ILL    P +  +++ 
Sbjct: 693 -KKG---------SVTADEFKTLLILLNPVAPHITEELWS 722


>gi|94993549|ref|YP_601647.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|122986870|sp|Q1J8Q8|SYL_STRPF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94547057|gb|ABF37103.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 6/199 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVIS 198
            E         + +   I 
Sbjct: 207 LEEVDWPESIKDMQRNWID 225



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 98/308 (31%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|225860293|ref|YP_002741802.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|254782841|sp|C1CPD0|SYL_STRZT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225726398|gb|ACO22249.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 90/318 (28%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVTTDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDR----YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  ++    Y D  K                            L+  F P LA +++
Sbjct: 710 VFVNAANKEDKLYIDYAK------------------------GFIQLIAPFAPHLAEELW 745

Query: 475 DILFVADENRCFQSLDQR 492
             +    E+  + +    
Sbjct: 746 QTVAETGESISYVAWPTW 763


>gi|254168672|ref|ZP_04875514.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596853|ref|YP_003483549.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622298|gb|EDY34871.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534640|gb|ADD08987.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 858

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 76/469 (16%), Positives = 153/469 (32%), Gaps = 38/469 (8%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
             + F  G ++ G+    A + AG+  +        + ++M        D  I+  +   
Sbjct: 279 YHLKFLEGINDKGEMTELAGKYAGMPVEDARKAIIEDLKNM--------DLLIK--QDEI 328

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                + W+  +    I K  +        +      E             ++ V+ +E 
Sbjct: 329 EQNVGVCWRCHTPIELINKEQWFIKIKDLKDEVKKTAEEINWHPEWMKKRLYDWVESLEW 388

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           +    R   +   +  +   +    +P     + +        D     K    G  +  
Sbjct: 389 DWVVSRQRYFATPIPIWECENGHTFVPKFEELQKMDRHVDPTIDPPPYEKCPICGAPLHG 448

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
               +   W+D+  + L  T +  + +    K +P  L     DI+R  A Y       +
Sbjct: 449 TED-VFDTWVDSSISPLYNTFWARDDE-KFEKLYPMSLRPQSHDIIRTWAFYTILRCKSV 506

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P          +   G  +  S GNV+DP+E+I+E G DALR+F   +   G+D  
Sbjct: 507 TGEKPWKDIAIDGFILAPDGRPMHTSWGNVVDPLEIIDEYGADALRFF-AAKCTPGEDTP 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +      +     +   + NL     S I                 D+ I+S  S V+ E
Sbjct: 566 FRYKDTIR--GRKVIIKLYNLGKFVGSAIKD--GIKEIPMEKLNFMDKWIISKYSEVVDE 621

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             + M      +A+  V + +     D Y +  K    +++         Y    V   +
Sbjct: 622 ATKYMDEYRYDKAVKLVENFMWNVFADHYVEMVKHRLNEES-------TKYTLYNVFLGI 674

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             +    +P +  +I+      +  R F+      +    +    +PIF
Sbjct: 675 VKMFAPIMPHITEEIYQ-----EHYRKFEG-----EKSVHITSWPEPIF 713



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 15/172 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I     Y + + HIGHA      D +AR+ R+ G +V +    D +G  I   
Sbjct: 27  SDKPIFSIDVPPRYASGKLHIGHATHYTHIDFIARYKRMRGYNVFYPLCFDVNGMPIEVN 86

Query: 62  AQNA-----GVTT--------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +         T         + F + N         +L  + D   + +T    +    
Sbjct: 87  VEKKYGIKMRETPRQEFIKLCEDFANANIGEMIRQFKILGEAMDPTIYYQTDAPYYRRIT 146

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++ + K+ +KG +YK  +   +  R      D E+         N     V+
Sbjct: 147 QLSFIKMFEKGLVYKAKHPVNWCPRCGTAIADAEIEYQKRKTKLNYVPFKVE 198


>gi|171920908|ref|ZP_02932059.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178931|ref|ZP_02964692.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024125|ref|ZP_02996861.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518253|ref|ZP_03003782.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524387|ref|ZP_03004413.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273760|ref|ZP_03206294.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554454|ref|YP_002284847.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550591|ref|ZP_03771540.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551525|ref|ZP_03772471.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903125|gb|EDT49414.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209194|gb|EDU06237.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019182|gb|EDU57222.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998148|gb|EDU67245.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659998|gb|EDX53378.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249515|gb|EDY74297.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541955|gb|ACI60184.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379340|gb|EEH01705.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379745|gb|EEH02107.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 900

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 17/290 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     + IM VW D+ ++Y     Y           +PAD+++ G D     F++    
Sbjct: 516 KTFYKEKDIMDVWFDSGSSYNVLQHYN--------LPYPADVYLEGYDQYRGWFNSSLIT 567

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             +L+   P    V     +  +G K+SKS GNV+DP++V +  G D LR ++       
Sbjct: 568 GTILNNKAPYKYLVAHGMVLDGEGYKMSKSKGNVVDPLDVCKVYGADVLRLWIANSDYQ- 626

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D    ++ LK+  NA++   I N + +    IL D++  +       + D+ +L+  + 
Sbjct: 627 NDTRISEEILKQ--NAEIYRRIRNTLFKYSLSILNDFEPSVDFSFDVRQEDQFVLNEFNE 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           +  ++ +  ++      +      +      YF+  K   + L   +P R   +      
Sbjct: 685 LHLKVIKAYESFDYQTIVKLFNKFILDLSSWYFENIKDDMYCLAVDDPIRKQ-IQSTVYW 743

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           +++   I L   +P    + +  L  A++    +  D   +  F   K  
Sbjct: 744 ILKNSLIDLTPIIPHTTEEAYSFLNDANKKESIRLEDFYDQSQFQFKKGI 793



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 13/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   +     Y N   HIGHA   I+ D +  +H ++     +  G D HG  I  A
Sbjct: 46  KDKKPFVLHDGPPYANGNIHIGHALNKILKDFVVSYHNMNNYYSPYIPGWDTHGLPIEVA 105

Query: 62  -----------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRI 108
                              K +  +   N       L +  D   R  T +  +      
Sbjct: 106 LSKKVKLSNLSVNERREQCKKYALEQVDNQIQQFLRLGMVSDFKQRYLTLDHSYEIDQLK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           L+  +  KG IY+     ++S   +    + E+  G
Sbjct: 166 LFANMLKKGFIYQDFKPVFWSWSSQTALAESEIEYG 201


>gi|126439704|ref|YP_001058710.1| valyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|162210068|ref|YP_333247.2| valyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254262061|ref|ZP_04953115.1| valine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|126219197|gb|ABN82703.1| valine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|254220750|gb|EET10134.1| valine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 955

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPEVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|53719592|ref|YP_108578.1| valyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126452676|ref|YP_001065962.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167719902|ref|ZP_02403138.1| valyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167846030|ref|ZP_02471538.1| valyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894601|ref|ZP_02482003.1| valyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167919265|ref|ZP_02506356.1| valyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217423755|ref|ZP_03455256.1| valine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242315662|ref|ZP_04814678.1| valine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254180039|ref|ZP_04886638.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254197804|ref|ZP_04904226.1| valyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|81824730|sp|Q63TI8|SYV_BURPS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52210006|emb|CAH35979.1| putative valyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126226318|gb|ABN89858.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|169654545|gb|EDS87238.1| valyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184210579|gb|EDU07622.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217393613|gb|EEC33634.1| valine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242138901|gb|EES25303.1| valine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 955

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPEVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|332178751|gb|AEE14440.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 918

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 71/383 (18%), Positives = 137/383 (35%), Gaps = 26/383 (6%)

Query: 111 KKISDKGDIYKGCYSGWYS----LRDEAYYNDDEVYKGADG---QYYNAQHNPVQWM--E 161
                KG +       W++     R+EA     EV    +    +      N   W    
Sbjct: 395 HCWRCKGKLIYRATEQWFASVDAFREEALRATKEVRWIPESGLERMSAMISNRTDWCISR 454

Query: 162 EEGYFFRLSAY--QDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGI 218
           +  +   + A+  +    +         +      E   S+ K     +         G 
Sbjct: 455 QRSWGLPIPAFYCEKCNSTIINEATINKVCEIFSKEGSDSWFKKDASQILGDYTCPICGG 514

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K       IM VW D+ +++             +   WPAD+++ G D     F +    
Sbjct: 515 KHFRKETDIMDVWFDSGSSHACVLK------QREELRWPADMYLEGTDQHRGWFQSSLLT 568

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  +    P    +     +  +G K+SKS GNVI P+EVIE+ G D LR ++       
Sbjct: 569 STAVFGKAPYKSVLTHGFIVDEEGYKMSKSRGNVIAPLEVIEKSGADVLRIWVASSDY-T 627

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D       L+++  +D    + N +   +S++         +P  + + D  I S  + 
Sbjct: 628 GDVAISDRILEQQ--SDTYKKLRNTIRYMLSLLNDFNPKDSISPDRWLDLDRYIYSEFND 685

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++QEI +   N   ++ L ++ S   +     Y D  K       + +R  +   V   +
Sbjct: 686 LIQEIDQYFYNYQFYKMLYKIKSFMTIDLSAFYLDVLKDRLYAGFDSER-KSAQTVIYRM 744

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           ++ L I+L   +   + + +  L
Sbjct: 745 LKDLLIILCPIISFTSEEAWGYL 767



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 15/166 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNA 65
             +     Y N   H+G A+  I+ D++ +++ + G    +  G D HG  I  +A +  
Sbjct: 51  FLLHDGPPYANGDIHLGTAFNKILKDMINKYYMIKGKYTPYVPGWDCHGLPIEFQALKTL 110

Query: 66  GVTTKVFV----DQNSRNF--------RDMADVLDIS--YDDFIRTTEKRHHDTCRILWK 111
           G + K F      +  +          R     L +   +D    T + ++      ++ 
Sbjct: 111 GKSKKEFTVTDIRKMCQEHALKFIDRQRKQFIRLGVFGYWDKPYITMDPKYEAMQIRIFW 170

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  KG IYKG    ++    E    + EV              PV
Sbjct: 171 EMYKKGYIYKGLKPVFWCPSCETALAEAEVEYYDTTSPSIFVKFPV 216


>gi|307708096|ref|ZP_07644564.1| leucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615881|gb|EFN95086.1| leucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ S+  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGSLDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFSPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|271968380|ref|YP_003342576.1| leucyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270511555|gb|ACZ89833.1| leucyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 828

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            RE+ Y+     YP+   H+GHA    I DV++R+    G +VL   G D  G     AA
Sbjct: 42  TRERRYMLDMFPYPSGDLHMGHAEVFAIGDVVSRYWFQRGYNVLHPIGWDSFGLPAENAA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +   N            +S+D    + T++  ++   + L+ +  ++G  Y
Sbjct: 102 IRRNAHPAEWTYANIETQAHSFKRYAVSFDWSRRLHTSDAEYYRWTQWLFIRFFERGLAY 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V   E   ++F+++ Y D+LL   
Sbjct: 162 RKGGLVNWCPNDQTVLANEQVKDGK----CERCGAEVVRRELTQWYFKITDYADRLLDD- 216

Query: 181 ESHPEFILPIERRNEVISF 199
            +  E   P        ++
Sbjct: 217 MAQLEGGWPERVLTMQRNW 235



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 105/285 (36%), Gaps = 36/285 (12%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PADLHVI 263
            ++      G     D    M  ++D+      Y+  T      D  K + W P D +V 
Sbjct: 489 WVNVACPKCGGPARRDTD-TMDTFVDSSWYFLRYVDPTYEDGPFDVEKLRQWGPIDQYVG 547

Query: 264 GKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   F        ++    P   ++ + G ++++G+ +SKSLGN +D  E
Sbjct: 548 GVEHAVLHLLYSRFFTKVLHDMGMVDFTEPFT-RLLNQGQVINQGKAMSKSLGNGVDLGE 606

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            I+  GVDA+R  +V       D  +                    ++R+   ++ +   
Sbjct: 607 QIDSYGVDAVRLTVVFAGPPEDDIDWADVSPAAS---------QKFLARAFR-VMAEAGA 656

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                  F   D  +     R + E+ + + +   + A+A+++ L S   +  D      
Sbjct: 657 ASAPGVDFATGDLDLRKAVHRTIDEVTKLVDSHRFNVAVARMMELTSATRKAID------ 710

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
              + P  A   +    E    LA++L    P  A + ++ L   
Sbjct: 711 ---SGPGAADPAVR---EAAETLAVMLSLVAPYTAEEGWERLGHP 749


>gi|298230202|ref|ZP_06963883.1| leucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256035|ref|ZP_06979621.1| leucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502072|ref|YP_003724012.1| leucine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|298237667|gb|ADI68798.1| leucine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 90/318 (28%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVTTDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDR----YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  ++    Y D  K                            L+  F P LA +++
Sbjct: 710 VFVNAANKEDKLYIDYAK------------------------GFIQLIAPFAPHLAEELW 745

Query: 475 DILFVADENRCFQSLDQR 492
             +    E+  + +    
Sbjct: 746 QTVAETGESISYVAWPTW 763


>gi|194396969|ref|YP_002036956.1| leucyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690847|sp|B5E6T0|SYL_STRP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194356636|gb|ACF55084.1| leucyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVTTDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|307126472|ref|YP_003878503.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483534|gb|ADM90403.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 90/318 (28%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVTTDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDR----YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  ++    Y D  K                            L+  F P LA +++
Sbjct: 710 VFVNAANKEDKLYIDYAK------------------------GFIQLIAPFAPHLAEELW 745

Query: 475 DILFVADENRCFQSLDQR 492
             +    E+  + +    
Sbjct: 746 QTVAETGESISYVAWPTW 763


>gi|293604537|ref|ZP_06686942.1| valine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817118|gb|EFF76194.1| valine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 964

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 116/361 (32%), Gaps = 50/361 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W      +             +  H       E     ++  ++G   +  +R    
Sbjct: 429 PDNWTTIYNQWLNNIQDWCISRQLWWGHQIPAWYSEDGQVFVAHDEAG--AIEQARAAGV 486

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
            G  +  DP  ++  W  +     TT G+ DN      ++ P+ + V G DI+ F    +
Sbjct: 487 TG-DLTRDPD-VLDTWFSSGLVPFTTLGWPDNTP-DLQRYLPSSVLVTGFDIIFFWVARM 543

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                 ++  +P              G+K+SKS GN +DP+++I+               
Sbjct: 544 VMLTTHMTGQIPFKHVYVHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLDGLVAKRTYGL 603

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+ +      G++  +D    +     +  N
Sbjct: 604 MNPKQAGAIEKATRRQYPDGIPAFGTDALRFTMAAYATLGRNINFDLKRCEG--YRNFCN 661

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + N  +R V M  + +D      G  +  D  I+S    +  ++     +         
Sbjct: 662 KLWN-ATRFVLMNTEGHDLTGSDAGETSFVDRWIISQMQTLEADVARGFADYRFDNIANA 720

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   V +   D Y +  K      T   +  T     + V+  +  L    +P +  +++
Sbjct: 721 LYRYVWDEYCDWYLELAKVQIQTGTPAQQLGT-RRTLIRVLECVLRLAHPIIPFITEELW 779

Query: 475 D 475
            
Sbjct: 780 Q 780



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E +   I           H+GHA+   I D L R+ R+ G D +F  GTD  G      
Sbjct: 52  TESQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYRRMSGDDTVFIPGTDHAGIATQIV 111

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +++     +    L  S D      T ++R  
Sbjct: 112 VERQLDAQKVSRHDLGREKFVEKVWEWKEKSGNAITEQVRRLGASADWPREYFTMDERMS 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
                 + ++  +G IY+G     +  +     +D EV       +      P
Sbjct: 172 RGVVETFVRLHKQGLIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYP 224


>gi|254567113|ref|XP_002490667.1| Mitochondrial leucyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238030463|emb|CAY68387.1| Mitochondrial leucyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328351053|emb|CCA37453.1| leucyl-tRNA synthetase (EC:6.1.1.4) [Pichia pastoris CBS 7435]
          Length = 880

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 77/204 (37%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K+Y  T   YP+   H+GH     I+DV+ RF+R+ G DV+   G D  G     A
Sbjct: 31  STKSKVYNLTMFPYPSGMLHLGHLKVYTISDVVTRFNRMKGYDVIHPMGWDAFGLPAENA 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVL--DISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V   V+   N    +   ++   D  ++  + T +  ++   + ++  + + G  
Sbjct: 91  AVERKVNPAVWTTSNISKMKAQMEMFLADFDWERCVTTCDPSYYKWTQKIFLLLHEHGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V    D          V+    E +F  ++ Y   L   
Sbjct: 151 YRKKAEINWDPIDMTVLANEQV---DDEGRSWRSGALVEKKLLEQWFLGITKYASALNKD 207

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            ++  E+   ++           G
Sbjct: 208 LDTLDEWPHSVKTMQRNWIGESEG 231



 Score = 45.9 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 73/196 (37%), Gaps = 18/196 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N  DP E I++ G DA R  ++ +        +D+  +           + +
Sbjct: 628 EKMSKSKHNGADPAECIQKYGADATRAHILFQAPITDILNWDEGKIVGVQRW--LKKVIS 685

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVIS 419
           L       + K+ +   P    F E +  + +     +  + ++      ++  ++  + 
Sbjct: 686 LAETIGERLTKEPEETKPIKD-FNEKETQLFNDVQDYIGSVTDSFGYTLSLNTVISDYMK 744

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L +                 N +     + +    + +L  ++    P  + +  +IL +
Sbjct: 745 LTNN-------------IADNVNDPQVSISLLKSSLEKLLTIMAPVTPVTSEEANEIL-L 790

Query: 480 ADENRCFQSLDQRLKP 495
           A ++  +QS+ +   P
Sbjct: 791 AKQSIPWQSILKADWP 806


>gi|308189742|ref|YP_003922673.1| valine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624484|gb|ADN68789.1| valine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 832

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 138/353 (39%), Gaps = 45/353 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +L + +S        +R   VI      + D +
Sbjct: 342 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 401

Query: 209 LSRKTFDWGIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           +SR+   WG +I                       + ++  W  +     +  G+     
Sbjct: 402 ISRQ-LWWGHRIPAWYKDDKVKVQIKSPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 460

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
             K +++P  L V G DI+ F    +Y+         P  + +         G+K+SKS 
Sbjct: 461 LLK-RYYPTSLLVTGYDIIFFWVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMSKSS 519

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N IDPI+VI E G DALR+F++   + G D  Y K+ +       L N + N+  R + 
Sbjct: 520 NNGIDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWNIA-RYIQ 576

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
           ++ +D           T +D  I +    + + I + MQN        ++   +      
Sbjct: 577 LLPED------KENKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFIYNDFSS 630

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            Y +      L K  P++ + +       ++ L ++   F+P + + ++ +LF
Sbjct: 631 WYVE------LLKIMPNKKAALDN-----LKSLLLIAHPFLPFITDHLYKVLF 672



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 19/140 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + HIGHA +  I D + R+ +L G DV +  G D  G       
Sbjct: 32  SKKPFTILLPPPNVTGKLHIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKV 91

Query: 63  QNAGVT-----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +N                        + ++ +  FR     L   + Y+    T + + +
Sbjct: 92  ENTIYQKEGLNRHDLGREKFLKRVWEWKEEYAELFRKQWASLGLALDYERERFTLDVKSN 151

Query: 104 DTCRILWKKISDKGDIYKGC 123
           +     +  +  KG IY G 
Sbjct: 152 EAVLKAFITLYKKGLIYHGT 171


>gi|37523220|ref|NP_926597.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708786|sp|Q7NF75|SYI_GLOVI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|35214223|dbj|BAC91592.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 983

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 62/318 (19%), Positives = 104/318 (32%), Gaps = 35/318 (11%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           I + K   + L         G       + IM VW D+ +++    G            +
Sbjct: 548 IWWQKEASELLPPGIACAHCGGTAFRKEKDIMDVWFDSGSSWAGVLGRRP------ELHY 601

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PAD+++ G D     F +            P    +     +   G K+SKSLGNV+DP 
Sbjct: 602 PADVYLEGSDQHRGWFQSSLLTCVATEGTAPYKTVITHGFTLDEHGRKMSKSLGNVVDPK 661

Query: 315 EVIEE---------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
            VI+           G D LR ++           Y  D L           +   +  +
Sbjct: 662 LVIDGGANQKQHPAYGADVLRLWVAS-------VDYTSDQLVGPSVLAQIAEVYRKIRNT 714

Query: 366 VSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              +L   +  +P        +  E D+ +L   S V  E+ +  ++    R    + + 
Sbjct: 715 ARYLLGSLNDFVPERDLVAFDSLGEVDQYLLHRLSVVHLEVTQAFESYQFSRFFQTIQNF 774

Query: 421 --VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 + Y D  K           R  +   V   V+  L  L+   +P LA  I+  L
Sbjct: 775 CVADLSNFYLDISKDRLYISAEVSLRRRSCQTVLYRVLESLTRLIAPVLPHLAEDIWQHL 834

Query: 478 FVADENRCFQSLDQRLKP 495
                 R   S+ +   P
Sbjct: 835 PYP---RSDASVFEAGWP 849



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA---- 62
             +     Y N + H+GHA   I+ D++ R+  L G  V +  G D HG  I        
Sbjct: 54  FILHDGPPYANGELHVGHALNKILKDIINRYQLLQGRRVRYVPGWDCHGLPIELKVLQDL 113

Query: 63  ---QNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
              + + +T        + F  +  ++         +   +D    T +  +      ++
Sbjct: 114 SQAERSQLTPLDVRTRARDFAQRTVQSQCASYKRFGVWGDWDHPYLTLQPEYEAAQLGVF 173

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            K++ KG IY+G     +S   +    + E+  
Sbjct: 174 GKMALKGYIYRGLKPVHWSPSSQTALAEAELEY 206


>gi|15604929|ref|NP_219713.1| leucyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|6919979|sp|O84211|SYL_CHLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3328616|gb|AAC67801.1| Leucyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748339|gb|ADI50885.1| Leucyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749219|gb|ADI51897.1| Leucyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 819

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++E+  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEIENGFS----VDGGYPVERRMLRQWVLRITAFADQLLE 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 81/299 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +        K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QVFYEAGIVSTPEPFKKLVNQGLVLATSYRIPGKGYIYPEIAKEENGKWVAPSGEELDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPQILIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M+  D            +++   LS+  +++Q + + ++   ++   +  + 
Sbjct: 649 RFLNRFYEMVSSDR--------VKEDNNFEGLSLAHKLVQRVTDAIEKLSLNTIPSSFME 700

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++      D  K     K+               +      L    P ++ +++ +L 
Sbjct: 701 FIN------DFVKLAVYPKS--------------AVEMAVRALAPIAPHISEELWVLLG 739


>gi|296806297|ref|XP_002843958.1| valyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238845260|gb|EEQ34922.1| valyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 1049

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 112/357 (31%), Gaps = 48/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E     +    +    ++  +  + + K F     +    
Sbjct: 507 WCLSRQLWWGHQAPAYFVDIEGEKGDDADGNLWVTGRTEEEAKAKAEKKFPGKKFVLKRD 566

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+           +P  +   G DIL F    +      ++ 
Sbjct: 567 PDVLDTWFSSGQWPYSTLGWPKKTH-DLENLYPVSILETGWDILFFWVARMIMLGIKMTG 625

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P   +V+ H  I   +G K+SKSLGNVIDPI+V+                        
Sbjct: 626 QVPF-NEVYCHSLIRDSEGRKMSKSLGNVIDPIDVMNGISLQNLHDKLLEGNLAEKEVAI 684

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR+ L+     G D  +D   +         N I      
Sbjct: 685 ATKFQKKAFPKGIPECGADALRFSLLAYSTGGGDINFDIQVI--HGYRRFCNKIYQATKF 742

Query: 365 SVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            +  +  D+         G  + S+  IL   ++  +   E ++N+    A   +     
Sbjct: 743 VLGKLGDDFKPQATPSKTGKESLSERWILHKFNQAAKLTNEALENREFSVAANIIYQYWY 802

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  K     + +P    +        +     L+   +P +  +++  L
Sbjct: 803 SQLCDVFIENSKTLLQAEADPAVQQSAKETLYTALEGALTLIHPVMPFVTEELWQRL 859



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K +E  Y    I  PN     H+GHA    + D + R+ R+ G  VL+  G D  G    
Sbjct: 120 KVKEAGYFVIPIPPPNVTGALHMGHALTKALQDTMIRWQRMKGKTVLYLPGYDHAGISTQ 179

Query: 60  KAAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +     T                   +  +   +       L  S+D      T ++
Sbjct: 180 SVVEKILWKTEKKTRHDIGREAMMGKIWEWTHKYHDSITASLRRLGGSFDWSREAFTMDE 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+G     + 
Sbjct: 240 NLSAAVTESFVRLHEEGTIYRGNRLVNWC 268


>gi|167746450|ref|ZP_02418577.1| hypothetical protein ANACAC_01160 [Anaerostipes caccae DSM 14662]
 gi|167653410|gb|EDR97539.1| hypothetical protein ANACAC_01160 [Anaerostipes caccae DSM 14662]
          Length = 806

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 32  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKMLNGYYVIHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV  K    +N  N +           +D  + TT+   +   + ++ ++  KG  
Sbjct: 92  AIKMGVHPKESTAKNIENIKRQIGEIAAIYDWDMEVNTTDPEFYKWTQWIFVQMFKKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G            V       +  +++ Y D+LL  
Sbjct: 152 YEKQMPINWCPSCKTGLANEEVVNGK----CERCGADVTKKNLRQWMLKITEYADRLLGD 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 208 LDKLDWPEKVKKMQAEWI 225



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 112/303 (36%), Gaps = 49/303 (16%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDN 247
           E      +G   L+   +  +    +   P       M  W         Y+ +    + 
Sbjct: 460 EKYEPTGTGESPLADIDEWVNTTCPVCGKPAKRETNTMPQWAGSSWYFLRYIDSKNSEEL 519

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH 298
               KA  + P D+++ G +    H +Y   +         +  + P  K          
Sbjct: 520 VSKEKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAVDFDEPFHKLFNQGMITGK 579

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+         +G+
Sbjct: 580 NGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDERGI---------DGV 630

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +SR  +++L   D  +          + +L V +R++ ++   ++   ++  ++  +
Sbjct: 631 RRFLSRFYNVVLDQKDKDVKET-------KDLLKVRNRLVYDVTSRLEKFSLNTVVSGFM 683

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++++   D  K     K   D+           +    +LL  F P ++ +++  L 
Sbjct: 684 EYNNKLN---DMAK-----KGGVDKK---------TLETFIVLLAPFAPHISEELWRELG 726

Query: 479 VAD 481
             D
Sbjct: 727 HED 729


>gi|157150214|ref|YP_001451053.1| leucyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083156|sp|A8AZ43|SYL_STRGC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157075008|gb|ABV09691.1| leucyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 833

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEELDWPESIKDMQRNWI 224



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 104/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLLN--------TKELVTENSGALDKVYHETVKSVTEQLEELKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 710 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 749

Query: 479 VADENRCFQSLDQ 491
             DE+  + +   
Sbjct: 750 QTDESISYVAWPT 762


>gi|158321607|ref|YP_001514114.1| leucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980073|sp|A8MJY6|SYL_ALKOO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158141806|gb|ABW20118.1| leucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 802

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++EK Y      YP+ Q  H+GH       DV++R  RL+G +VL+  G D  G     
Sbjct: 29  KDKEKFYALIEFPYPSGQGLHVGHPRPYTALDVVSRKRRLEGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  KV  +QN   F+     L +S+D    I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAIKNKIHPKVVTEQNVARFKKQLQGLGMSFDWSREINTTDPEYYKWTQWIFLKLFEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   S  +    +    ++EV  G            V   ++  +  +++ Y ++L++
Sbjct: 149 AYKKEMSINWCTSCKVGLANEEVVNG----GCERCGAEVVRKQKNQWMLKITEYAERLIN 204

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +          ++   I   +
Sbjct: 205 DLDLVDYIERVKIQQKNWIGKSE 227



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 113/359 (31%), Gaps = 63/359 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+  R
Sbjct: 414 YKLRDWVFSRQRYWGEPIPLVHCDCCGWVPVPESQLPVLLPEVESYEPTDNGESPLANLR 473

Query: 212 KTFDWGIKIPDD----PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +                M  W         Y       +        +W P D +  
Sbjct: 474 DWVETTCPKCGGKAERETDTMPQWAGSSWYFLRYTDPHNNEELASKENLDYWMPIDWYNG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         + +  P  K+      +    EK+SKS GNVI+P +
Sbjct: 534 GMEHTTLHLLYSRFWHKFLYDCGVVPSCEPYQKRTSHGMILGENNEKMSKSRGNVINPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ E G D LR + +      K   + ++G+K         G    + R   +     D 
Sbjct: 594 IVTEFGADTLRLYEMFIGDFEKSVPWSQNGVK---------GCRRFLDRIWKLQEILVDS 644

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
              T        + +     + ++++ E+ +    + A+A +++L+   + ++D      
Sbjct: 645 QEMT--------KELEGNIHKTIKKVTEDYETLKFNTAVASMMALI---NDFYDH----- 688

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                         VT   ++ L  LL    P +  +++++L          +   D+ 
Sbjct: 689 ------------GTVTKGDMKTLLTLLNPVAPHITEELWEVLGFEGHIYGTTWPIWDEA 735


>gi|327390672|gb|EGE89012.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 833

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 90/318 (28%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVTTDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDR----YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  ++    Y D  K                            L+  F P LA +++
Sbjct: 710 VFVNAANKEDKLYIDYAK------------------------GFIQLIAPFAPHLAEELW 745

Query: 475 DILFVADENRCFQSLDQR 492
             +    E+  + +    
Sbjct: 746 QTVAETGESISYVAWPTW 763


>gi|99034770|ref|ZP_01314694.1| hypothetical protein Wendoof_01000481 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 808

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 78/196 (39%), Gaps = 6/196 (3%)

Query: 10  STAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
                YP+ + H+GH     I DV+AR+ R +G +VL   G D  G     AA++  ++ 
Sbjct: 2   LEMFPYPSGKIHMGHLRNYAIGDVIARYKRANGFEVLHPIGWDAFGLPAENAARDNNISP 61

Query: 70  KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW 127
           + +  +N  N R     + +SY+    + T E  ++   +  +      G  Y+      
Sbjct: 62  ETWTKENIDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAYRKESWVN 121

Query: 128 YSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           +   D+    +++V  G            V+  +   +F +++ + + LL   +S   + 
Sbjct: 122 WDPVDQTVLANEQVVDGKG----WRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLKNWP 177

Query: 188 LPIERRNEVISFVKSG 203
             ++   E       G
Sbjct: 178 EKVKTMQERWIGKSEG 193



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 124/396 (31%), Gaps = 83/396 (20%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR-- 193
            N      G   Q Y     P+ + ++ G           +L           P+++   
Sbjct: 391 INYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVVLPIDVEFTSGGNPLDKHPT 450

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
            + +   K G               K  +        + ++   +        + D    
Sbjct: 451 WKFVDCPKCG---------------KQAERETDTFDTFFESSWYFAAFCSEDKSIDKDAC 495

Query: 254 KFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLPL----PKKVFSHGFILHKG 300
             + P D ++ G +    H +Y                  P      + +  H     + 
Sbjct: 496 NRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFDIKEPFSTLITQGMVCHATYKDEN 555

Query: 301 ------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                                   EK+SKS  N +DP  +IE+ G D  R F++ +    
Sbjct: 556 GKWLFPAEAKELIARGAKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPE 615

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           KD  +  DG++    +   N +  +V + +  +   YD    T G              +
Sbjct: 616 KDMEWSDDGVEG--CSRYVNKLWRMVMQ-LRPVNIHYDNENVTGGLL-----EYRKKIHK 667

Query: 397 VLQEIRENMQNQLIHRAL---AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +L  + ++++N  ++  +    ++ +L++E+D                    T   +  E
Sbjct: 668 LLHGLTDDLENCRLNCVVAKFREMTNLIAEID------------------VKTGKSLIDE 709

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            I  L  +++ F+P LA  ++  +      +  +SL
Sbjct: 710 GICILIRVIEPFIPHLAESLWQEIGGQPWPKADESL 745


>gi|302838408|ref|XP_002950762.1| hypothetical protein VOLCADRAFT_60821 [Volvox carteri f.
           nagariensis]
 gi|300263879|gb|EFJ48077.1| hypothetical protein VOLCADRAFT_60821 [Volvox carteri f.
           nagariensis]
          Length = 983

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 118/385 (30%), Gaps = 69/385 (17%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E E  +FR            +      +P           KS  +    S     W +
Sbjct: 411 PKEFEAVWFRWLENIRDWCISRQLWWGHRIPAYYVVFEGEDDKSSGRPGMPSEDMTRWVV 470

Query: 219 KIPDDP-------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
               D                    + ++  W  +     +  G+ +        F+P  
Sbjct: 471 GRTPDEARAAAAAKYPGREFRLVQDEDVLDTWFSSGLFPFSVMGWPEQTA-DLQTFYPTS 529

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           L   G DIL F    +      L+  +P  +           G K+SKSLGNVIDP+ VI
Sbjct: 530 LLETGHDILFFWVARMVMMGIQLTGQVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPLHVI 589

Query: 318 E-------------------------------------EVGVDALRYFLVREIACGKDGF 340
           E                                     E G DALR+ LV   A  +D  
Sbjct: 590 EGISLEGLYDTLAGGNLDPKEVERAKAGQKADFPDGIEECGTDALRFALVAYTAQARDIN 649

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVL 398
            D   +         N + N +  ++  +  D+        A +  E+   ILS  +  +
Sbjct: 650 LDIKRVVA--YRYWCNKLWNAIKFAMMNLPPDFAPPAQELVAASCPEACRWILSRLNNAI 707

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + I + M+      A  +V +       D + +  KP      +    +    +T E + 
Sbjct: 708 RVIVQAMEAYDFSSATQRVYAFWQNEVCDVFIEVMKPVMAFDDSQPHLADAKRLTRETLW 767

Query: 457 QLA----ILLQAFVPKLANKIFDIL 477
                   LL  F+P +  +++  L
Sbjct: 768 TCLDCGLRLLHPFMPFVTEELWQRL 792



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 49/147 (33%), Gaps = 19/147 (12%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK----- 70
                HIGHA    I D + R+ R+ G + L+  GTD  G       +      K     
Sbjct: 56  VTGALHIGHALTNSIQDTITRWRRMSGYNTLWVPGTDHAGIATQTVVEKKLQREKGVTRH 115

Query: 71  ------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDK 116
                        +VDQ      D    L  S D      T +++        + ++ + 
Sbjct: 116 DLGREGFLGEVWQWVDQYGHRIHDQLRRLGSSVDWSRTAFTMDEKLSRAVLEAFVRMFEG 175

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           G IY+      +  + +   +D EV  
Sbjct: 176 GCIYRDNRLVNWCCKLKTAVSDIEVDY 202


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 75/461 (16%), Positives = 142/461 (30%), Gaps = 43/461 (9%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD---MADVLDI--SYDDFIRTTEKRHHDT 105
            D HG   A+     G+           + +    +     I  SY    R  +   +  
Sbjct: 354 VDNHGVFRAEVPHFGGMHINKANPAIIEHMKQSGSLLAGSRIEHSYPHCWRCKKPVIYRA 413

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
               +  +       K        +++E  +       G D  Y   ++ P  W      
Sbjct: 414 TPQWFISMEHNDLREKS----LQQIKEEVTWVP---AWGRDRIYNMIENRP-DWCVSRQR 465

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK------TFDWGIK 219
            + +           E   +  +  +  N + S       +  +S            G  
Sbjct: 466 LWGVPITVLYCSQCEEPLQDIAVFEKAANLIESEGVDAWYERPVSDFLQPGTTCTHCGHG 525

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                + I+ VW D+   +             +   WPAD+++ G D     FH+    A
Sbjct: 526 EFYKEKDILDVWFDSGVTHAAVLR-------KRGLPWPADMYLEGSDQHRGWFHSSLLTA 578

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P    +     +  KG K+SKS+GNV+ P  +I++ G D LR ++  E     
Sbjct: 579 VATRGQAPYKTVLTHGFVLDGKGRKMSKSMGNVVAPDAIIKKYGADILRLWVAAEDY-RD 637

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----GAFTESDESILSV 393
           D     + +       LA     + + +  M+   YD    T     G   E D   L+ 
Sbjct: 638 DLRISDEII-----NRLAESYRRIRNTARYMLGNLYDFNPLTDAILYGDMLEFDRYALAR 692

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
                + + +  +N   H       +   V    +Y D  K   L   + D  +  +   
Sbjct: 693 YHAFEKRVLDAYENYEFHVIYHACNNFCSVDMSAQYLDIIKD-RLYAEDADGFKRRSAQS 751

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
               ++  +  LL   +     +++  L   ++      LD
Sbjct: 752 ALHLILSGMMRLLAPVLSFTMEEVYQHLNEPEKLASVHLLD 792



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 17/172 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + +    +     Y N   HIGHA   I+ D++ +   + G    +  G D HG  I   
Sbjct: 45  QGKSLFVLHDGPPYANGHLHIGHALNKILKDIIIKQKSMQGFQAPYVPGWDCHGLPIELG 104

Query: 60  --KAAQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTE-KRHHDT 105
             KA      TT         +    +     R+      +  ++D+   T +     D 
Sbjct: 105 VDKALGKDKHTTTAVDKRQLCREHAARYIEIQREEFQRFGVFGAWDEPYLTMDFAYEADI 164

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            R L   +  KG +Y+G    ++         + EV              PV
Sbjct: 165 VRELGSFM-AKGSLYRGLKPIYWCCDCVTALAEAEVEYHDHTSDSVYVAFPV 215


>gi|76788931|ref|YP_328017.1| leucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237802632|ref|YP_002887826.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|123744920|sp|Q3KMF3|SYL_CHLTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76167461|gb|AAX50469.1| leucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273866|emb|CAX10657.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 819

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++E+  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEIENGFS----VDGGYPVERRMLRQWVLRITAFADQLLE 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 81/299 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +        K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QIFYEAGIVSTPEPFKKLVNQGLVLATSYRIPGKGYIYPEIAKEENGKWVAPSGEELDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPQILIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M+  D            +++   LS+  +++Q + + ++   ++   +  + 
Sbjct: 649 RFLNRFYEMVSSDR--------VKEDNNFEGLSLAHKLVQRVTDAIEKLSLNTIPSSFME 700

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++      D  K     K+               +      L    P ++ +++ +L 
Sbjct: 701 FIN------DFVKLAVYPKS--------------AVEMAVRALAPIAPHISEELWVLLG 739


>gi|45184857|ref|NP_982575.1| AAR034Wp [Ashbya gossypii ATCC 10895]
 gi|44980466|gb|AAS50399.1| AAR034Wp [Ashbya gossypii ATCC 10895]
          Length = 1098

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 120/356 (33%), Gaps = 48/356 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y  + E               ++  +    + + F   +   +  
Sbjct: 557 WCISRQLWWGHRCPVYFVNIEGKEQSRNEGTYWVSGRNLEEAQKKAAEKFPNEVYTLEQD 616

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ D      + F+P  +   G DIL F    +      L+ 
Sbjct: 617 EDVLDTWFSSGLWPFSTLGWPDKTP-DMSTFYPFSMLETGWDILYFWVARMILLGIKLTG 675

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
           N+P   +VF H  +   +G K+SKSLGNV+DP+ VI                        
Sbjct: 676 NVPF-NEVFCHSLVRDAQGRKMSKSLGNVVDPLYVITGSSLEELHATLSKGNLDPREVEK 734

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         + G DALR+ L      G+D   + D L+        N I      
Sbjct: 735 AKAGQKESYPNGIPQCGTDALRFALCAYTTGGRDI--NLDILRVEGYRKFCNKIYQATKF 792

Query: 365 SVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           ++  +  DY         G  +  ++ IL   S   + + E    +    + + +     
Sbjct: 793 ALMRLGDDYVPPAEEQLSGNESLVEKWILHELSSTAKTVNEAFDKRDFLTSTSAIYDFWY 852

Query: 423 E-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D Y +  K    + T+ ++  +       ++     L+  F+P ++ +++  L
Sbjct: 853 LICDVYIENSKYLIQEGTDLEK-KSARDTLYTLVDNALRLIHPFMPFISEEMWQHL 907



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 175 FCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQI 234

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + +      +     L  SYD      T +     +  
Sbjct: 235 WANEKKTRHDYGREEFVKKVWDWKEVYHAKIKSQVQRLGASYDWSREAFTLDPELSRSVT 294

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ ++G IY+      +S++
Sbjct: 295 EAFVRLHEEGVIYRASRLVNWSVK 318


>gi|307711009|ref|ZP_07647431.1| leucyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307616971|gb|EFN96149.1| leucyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 833

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKVVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|270292031|ref|ZP_06198246.1| leucine--tRNA ligase [Streptococcus sp. M143]
 gi|270279559|gb|EFA25401.1| leucine--tRNA ligase [Streptococcus sp. M143]
          Length = 833

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIAAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|223043614|ref|ZP_03613659.1| leucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443102|gb|EEE49202.1| leucyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 804

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESIKDMQRNWIGRSE 226



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 104/281 (37%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNENMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVSSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + ++GL         +G    + R   +I+   +           +D+S+  V 
Sbjct: 609 LDAAIAWSENGL---------DGSRRFLDRVWRLIV--TEDGSLNNKIVESNDKSLDKVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  +++  +  +  KP+                    
Sbjct: 658 NQTVKKVTEDFDALSFNTAISQLMVFINDCYKANEIYKPY-------------------- 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++  L   +    + + + D+ L
Sbjct: 698 IEGFVKMLAPIAPHIGEELWSKLGHNETITYQPWPTFDESL 738


>gi|20091870|ref|NP_617945.1| valyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74529744|sp|Q8TLI4|SYV_METAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19917063|gb|AAM06425.1| valyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 869

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 144/399 (36%), Gaps = 25/399 (6%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE------EGY 165
            + D+  + +     W         ++ + +   + +      + ++W  E      + +
Sbjct: 324 FLYDQKSLEQNVGLCWRCDTPIEILSEPQWFVKINHEGILKAADEIKWYPEYMKVRLQNW 383

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK---DLSLSRKTFDWGIKIPD 222
              +            + P  I   ++  EV+   +S L    + +  +K    G    +
Sbjct: 384 TGTMEWDWCISRQRIFATPIPIWYCKKCGEVMIAEESWLPIDPNENTPKKACACGSTEFE 443

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
               ++  W+D+    L  +G+    +       P  +   G DI+R  A Y    +  L
Sbjct: 444 PETDVLDTWMDSSITALHVSGWESEHEMRL----PTQIRPQGHDIIRTWAFYTILRSLAL 499

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P    V +   +   G K+SKSLGNVI P EV  +   DA R +     + G D  
Sbjct: 500 EGKRPWDSIVINGMVLGPDGHKMSKSLGNVISPEEVTTQYSADAFRQWGAVGGSTGSDVM 559

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTESDESILSVCSRV 397
           +    +     +     + ++   S+S  LKD+   D     P A    D  +LS  +++
Sbjct: 560 FRWKDVVSA--SRFLQKMWSIYRFSMS-HLKDFEPADAENFPPDALLTIDRWLLSKLNKL 616

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +    + +           +     E   D Y +  K   L   +P+      YV     
Sbjct: 617 VDTATKELDGYQFDSTFKAIRGFAWEVLADNYLELVK-GRLYGEDPEGRKAAQYVLYTTT 675

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRL 493
           R L++LL  F+P  A +++          + + +++++L
Sbjct: 676 RTLSLLLAPFIPFFAEEMYSRFSEESVHTQTWPAVNEKL 714



 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 79/253 (31%), Gaps = 25/253 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG       +
Sbjct: 37  RPQYIIDTPPPYPTGNFHIGNALNWCYIDYIARYKRMRGYNVMFPQGWDCHGLPTEVKVE 96

Query: 64  NAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRI 108
                TK                  N    R     L  S D  +   T E  +    + 
Sbjct: 97  EIHGITKNQVPRAEFRKMCRELTAGNIEKMRKTMLRLGFSVDWSNEFVTMEPSYFVKTQK 156

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            + ++ + G IY   +   +  R E      EV    + +    + N V + + +    R
Sbjct: 157 SFVRMYNDGHIYHEDHPVNWCPRCETAIAFAEV----EYESRQTKLNFVHFDKVDIATTR 212

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG-----IKIPDD 223
                  +        E       +   +      +  ++      ++G     I    D
Sbjct: 213 PELMAACVAVAVNPKDERYSQHIGKEITVPIFGQKVTLIADEAVEPEFGTGAVMICTFGD 272

Query: 224 PQYIMYVWIDALT 236
            Q + + W+    
Sbjct: 273 KQDVRW-WVKYGL 284


>gi|58258417|ref|XP_566621.1| isoleucine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134106407|ref|XP_778214.1| hypothetical protein CNBA2140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260917|gb|EAL23567.1| hypothetical protein CNBA2140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57222758|gb|AAW40802.1| isoleucine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1094

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +     + Y         K +PAD    G D     F+ +      L  
Sbjct: 536 EEVFDCWFESGSMPYAQSHYPFENVERFQKSYPADFISEGIDQTRGWFYTLLVLGTHLFE 595

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
             P    + +   +   G+K+SK L N  DP+EV+ + G D +R FLV       D   +
Sbjct: 596 TAPWKNLIVTGLVLAADGKKMSKKLKNYPDPMEVVNKYGADCVRLFLVNSPVVRADNLRF 655

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMIL-------KDYDGMIPTPGAFTESDESILSVC 394
            ++G+++ +   +     N ++  +  +          +        +    D  IL+ C
Sbjct: 656 REEGVREILTNVIL-KWINSLNFYLGQVELFEQTTGDKFVYDHDAKKSTNVMDRWILATC 714

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++Q +   M    ++  + +++ L+S++ + Y    +         +     L    E
Sbjct: 715 QTLIQHVETEMAAYRLYTVIPKLLDLISDLTNWYIRFNRSRLKGSGGVEDTRAALNTLYE 774

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L + + +F P     ++  L
Sbjct: 775 ALLTLCLTMSSFTPFTCETVYQAL 798



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +   +PH GH     I D++ R     G  V    G D HG  +   
Sbjct: 39  EGKPEYSFFDGPPFATGKPHYGHLLAGTIKDIVTRHAHSTGHHVERRFGWDTHGLPVEHE 98

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++   + +   I ++   +T +   
Sbjct: 99  IDKTLNIKGKEDVMAMGIDKYNAACRDIVMRYSNEWKSTVERMGRWIDFETGYKTLDPTF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++ ++  K  +Y+G     YS       ++ E
Sbjct: 159 MESVWWVFGQLWKKDQVYRGLRVMPYSTGCTTPLSNFE 196


>gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 109/291 (37%), Gaps = 20/291 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G         IM VW D+ ++++           ++   WPADL++ G D     F
Sbjct: 515 KCECGSTEFRKETDIMDVWFDSGSSHVAVLE------TTEGLRWPADLYLEGSDQHRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G K+SKSLGN IDP +V++E G D LR + V
Sbjct: 569 QSSLLTSVATRGMAPYKNVLTHGFVVDGEGRKMSKSLGNGIDPADVVKEYGADILRLWTV 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D    K+ LK+   +     I N     +S +   D D          + D+ 
Sbjct: 629 SAD-FTSDMRISKEILKQMTES--YRKIRNTAKFLLSNLYDFDADKDALPYEELLDIDKW 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWEL---KKTNPDRA 444
            L   + +++++  +      +  L  V    +V   + Y D  K         +   RA
Sbjct: 686 ALYKFNELIKDVTSSFDRYEFYDFLHLVHTFCIVDMSNLYLDILKDRLYTFPAASKERRA 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +        ++     ++   +   A++I+  +   + N  ++S+     P
Sbjct: 746 AQT--TLYTILDGFVRIIAPVLTFTADEIWSYMK-HEANNNYESVQLADWP 793



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   H+G A   ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKEKFILHDGPPYANGDIHLGTAMNKVLKDMIVKYKTMRGFDAPYVPGWDTHGLPIEQQ 104

Query: 62  ------AQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                  +   V         + F        +     L +   + +   T +  +    
Sbjct: 105 AIKTLGIKRNEVGPVEFRKVCRDFAFSQIEKQKSQFIRLGVRGDWQNPYLTLKPEYEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ KG IYKG    ++    E    + E+  
Sbjct: 165 IEVFGEMAKKGYIYKGLKPVYWCTDCETALAEAEIEY 201


>gi|289580919|ref|YP_003479385.1| valyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530472|gb|ADD04823.1| valyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 896

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 74/447 (16%), Positives = 140/447 (31%), Gaps = 37/447 (8%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE       A    G++T+           +  D      D +  T 
Sbjct: 303 WYQAHDLPLRVAIDESATMTDLAGDYEGLSTEEA----REAIVEDLDDEGSLRDRWEITH 358

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C         +  + K  Y      ++E      E+    +  +   +H  ++
Sbjct: 359 AVGVHERCDTP-----VEYRVSKQWYVEILDHKEEYLEAGQEMDWYPEKMFTRYKH-WIE 412

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E +    R          +Y    +  +      E        L D        + G 
Sbjct: 413 GLEWDWLISRQRDSGIPFPVWYCEDCDHPI----MAEKEDLPVDPLSDEPPVDACPECGH 468

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFHAI 273
              D  + +   W  +    L   G+  +         K + +P DL   G DI+ F   
Sbjct: 469 DEFDPEEDVFDTWATSSLTPLINAGWDWDEESEEFAMDKPELYPFDLRPQGHDIISFWLF 528

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    EK+SKS GN++ P EV+ E  VDA+R++   
Sbjct: 529 HTVVKCYEHTGEVPFDATMINGHVLDENREKMSKSKGNIVAPDEVLAEYPVDAVRFW-AA 587

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  Y +  L  R    L   + N      ++   D +     P      D  +L
Sbjct: 588 SAAVGDDFPYQEKDL--RAGEKLLRKLWNASKLVDTLAPADPE----EPDELEPIDRWLL 641

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + E+    +     +A  ++ +       D Y +  K         +   +  Y
Sbjct: 642 AELDDAVAELTTQFEEYEFAKARDRLRTFFWNTFCDDYLEIAK-------GREDNPSTQY 694

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
                 R    L   F+P +  +I+  
Sbjct: 695 ALRTAHRTFLELWAPFLPHVTEEIWQA 721



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I T     +   H+GH Y   + D  ARF R+   +VLF  G D++G    +  +   
Sbjct: 56  YAIDTPPPTVSGSLHMGHLYGSTLQDFAARFQRMTDGEVLFPFGYDDNGIASERLTETEL 115

Query: 67  VT-------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +    +    F +    L   I + +  +T E R     ++ + 
Sbjct: 116 DIRHQDYERREFQELCREVCTEYEAEFTEKMQDLGTSIDWSNTYKTIEPRVQRISQLSFL 175

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
            + +KG  Y+      +    E   +  E+     G ++N
Sbjct: 176 DLYEKGREYRKKAPAIWCPECETAISQVEMEDDERGSHFN 215


>gi|289168700|ref|YP_003446969.1| leucyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908267|emb|CBJ23109.1| leucyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 833

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|283781044|ref|YP_003371799.1| isoleucyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439497|gb|ADB17939.1| isoleucyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 1125

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 102/305 (33%), Gaps = 46/305 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN- 283
           ++  W D+        GY         + +PAD      D     F++    + +L    
Sbjct: 562 VIDCWYDSGAMPFAQWGYPHKGAADFQQQFPADFISEAIDQTRGWFYSQLAISTMLFGKG 621

Query: 284 ------------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                        P    +     +   G+K+SKS  N  +P E+ ++ G DALR++   
Sbjct: 622 GVSGEAQPREYPHPFKNCIVLGLMLGEDGQKMSKSKRNYREPNEIFDKYGADALRWYFFA 681

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----------- 380
             A      Y +  +K  +  +    + N  S  V  I  + DG  P+            
Sbjct: 682 NQAPWTSIRYKEQSIKDSIP-EFLLRLWNCYSFFV--IYANIDGFDPSKLLADVGDGQLD 738

Query: 381 -------------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
                            E D  I+    +   ++   M       A   + + V  +  +
Sbjct: 739 AATLAKAKHYRPIAERGELDRWIMGELHKTSADVTRLMDQYDNFEACKLLNAFVDGLSNW 798

Query: 428 F---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           F     ++ W   KT+P++     +   E +   A L+  F P LA  ++  L  +  + 
Sbjct: 799 FVRRSRERFWAADKTSPEKLDA-YWTLYECLLTTAKLIAPFTPFLAETLWQNLARSVSSD 857

Query: 485 CFQSL 489
             +S+
Sbjct: 858 VLKSV 862



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 33/182 (18%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E+          N  PH GH     I D+  R+  + G       G D HG  +   
Sbjct: 36  KDAERFVFFEGPPTANGMPHPGHCLTRSIKDLFPRYQTMRGKLCERKAGWDTHGLPVEV- 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                        +   + ++  +   I         E   H     +W+ +     + +
Sbjct: 95  ---------EVCKEMGIHSKEEIEAFGI---------EPFIHRCQASVWRYMQQWEKLTE 136

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               G++   D+AY              Y+       W   +  F     YQ   + ++ 
Sbjct: 137 R--LGFWIKLDQAYVT------------YHQSFVESVWWSLKQLFDNGLLYQGHKIVWWW 182

Query: 182 SH 183
           + 
Sbjct: 183 AQ 184


>gi|73662315|ref|YP_301096.1| leucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761539|sp|Q49YI8|SYL_STAS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72494830|dbj|BAE18151.1| leucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 804

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMLGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKENIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWPESLKDMQRNWIGRSE 226



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 111/282 (39%), Gaps = 46/282 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNEQMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 549 FDLGVVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVKSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   +++   +    +        +++   
Sbjct: 608 PLDAAIAWSENGL---------DGSRRFLDRIWRLLI--TEDGSISNKVVNNHSKALDKS 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             + ++++ E+  +   + A++Q++  +++  +  +  KP+                   
Sbjct: 657 YHQTVKKVTEDYNSLNFNTAISQLMVFINDCYKAEEIYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
            I     +L    P ++ +++  L   +    + + S D+ L
Sbjct: 698 -IEGFIKMLAPIAPHISEELWSRLGHDETITYQPWPSYDEAL 738


>gi|46446128|ref|YP_007493.1| isoleucyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627502|sp|Q6MDY1|SYI_PARUW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46399769|emb|CAF23218.1| putative isoleucyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 1038

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 70/446 (15%), Positives = 153/446 (34%), Gaps = 28/446 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D +GQ   +  +  G+  K       +  +  A V+        Y    R+     
Sbjct: 343 VCPVDNNGQFTDEIPEYKGIFVKEADKDIIKRLKQQAKVIHQGTCHHRYPFCPRSDTPLI 402

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           + T R  +                   ++D     + +++   +   Y      ++   +
Sbjct: 403 YKTVRTWF--------------VAVEKIKDRLLAANSQIHWTPEHIQYGRFGKWLEGARD 448

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI-SFVKSGLKDLSLSRKTFDWGIKIP 221
                         L   +     ++      + +     + L    +   +F+   K  
Sbjct: 449 WAISRNRYWGTPIPLWRAQDGEIHVVGSIEELKQLTGNPLTDLHRHFIDEMSFEKNGKTF 508

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPAFLL 280
                +   W ++ +       Y         + +PAD    G D  R +          
Sbjct: 509 KRIPEVFDCWFESGSMPYAQNHYPFENRELFEQNFPADFIAEGLDQTRGWFYTLTVLSAA 568

Query: 281 SANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KD 338
             + P  K V  +G IL + G K+SK L N  DP EVI++ G DA+R +++   A    D
Sbjct: 569 LFDQPAMKNVIVNGLILAENGAKMSKRLKNYPDPAEVIQQYGADAIRLYMLHSPAVKADD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             + K G++  +   L               + ++             D+ I+S+ ++++
Sbjct: 629 LSFSKSGVELVLRQILLPLWNAYTFFLTYARIYNWKPGKLVQKPELAIDQWIISLLNKLV 688

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVEVI 455
            E+ + M +  + R++   ++ V ++ + Y     ++ W+  K +P+R          V+
Sbjct: 689 HEVEQGMDDYDLSRSVEPFVNFVDQLTNWYIRRSRRRFWD-DKESPNRTQA-FETLYYVL 746

Query: 456 RQLAILLQAFVPKLANKIFDILFVAD 481
            +L  +   +VP ++  I+  L   D
Sbjct: 747 IELTKISAPYVPFISEAIYQNLRSCD 772



 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +          +    PH GH     I DV+ R+  + G       G D HG  +   
Sbjct: 35  KGQPLFTFYDGPPFATGLPHYGHILAGTIKDVVLRYKTMKGFCAPRRFGWDCHGLPVENE 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V + +  ++   + +   + ++   RT +   
Sbjct: 95  IEKTFGLSGAKSIEEFGIAKFNEECRNIVLRYTEEWKFTVNRMGRWVDFNQTYRTMDLPF 154

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K++  KG +Y+
Sbjct: 155 MESVWWVFKQLYAKGLVYE 173


>gi|317471256|ref|ZP_07930620.1| leucyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901264|gb|EFV23214.1| leucyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 803

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKMLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV  K    +N  N +           +D  + TT+   +   + ++ ++  KG  
Sbjct: 89  AIKMGVHPKESTAKNIENIKRQIGEIAAVYDWDMEVNTTDPEFYKWTQWIFVQMFKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G            V       +  +++ Y D+LL  
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGK----CERCGADVTKKNLRQWMLKITEYADRLLGD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 205 LDKLDWPEKVKKMQAEWI 222



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 114/310 (36%), Gaps = 49/310 (15%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDN 247
           E      +G   L+   +  +    +   P       M  W         Y+ +    + 
Sbjct: 457 EKYEPTGTGESPLADIDEWVNTTCPVCGKPAKRETNTMPQWAGSSWYFLRYIDSKNSEEL 516

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH 298
               KA  + P D+++ G +    H +Y   +         +  + P  K          
Sbjct: 517 VSKEKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAVDFDEPFHKLFNQGMITGK 576

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+         +G+
Sbjct: 577 NGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDERGI---------DGV 627

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +SR  +++L   D  +          + +L V +R++ ++   ++   ++  ++  +
Sbjct: 628 RRFLSRFYNVVLDQKDKDVKET-------KDLLKVRNRLVYDVTSRLEKFSLNTVVSGFM 680

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              ++++   D  K     K   D+           +    +LL  F P ++ +++  L 
Sbjct: 681 EYNNKLN---DMAK-----KGGVDKK---------TLETFIVLLAPFAPHISEELWRELG 723

Query: 479 VADENRCFQS 488
            AD     + 
Sbjct: 724 HADSVFSEEW 733


>gi|301793524|emb|CBW35899.1| leucyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 833

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 104/316 (32%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E + +   + A+AQ++
Sbjct: 659 -KFLDRVYRLIR--------SKEIVAENNGALDKVYNETVKAVTEQIDSLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENR---CFQSLDQ 491
              E+     + + D+
Sbjct: 750 ATGESISYVTWPTWDE 765


>gi|255348566|ref|ZP_05380573.1| leucyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503106|ref|ZP_05381496.1| leucyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 819

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++E+  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEIENGFS----VDGGYPVERRMLRQWVLRITAFADQLLE 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 97/299 (32%), Gaps = 81/299 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +        K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QVFYEAGIVSTPEPFKKLVNQGLVLATSYRIPGKGYIYPEIAKEENGKWVAPSGEELDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPQILIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M+  D            +++   LS+  +++Q + + ++   ++   +  + 
Sbjct: 649 RFLNRFYEMVSSDR--------VKEDNNFEGLSLAHKLVQRVTDAIEKLSLNTIPSSFME 700

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++      D  K     K+               +     +L    P ++ +++ +L 
Sbjct: 701 FIN------DFVKLAVYPKS--------------AVEMAVRVLAPIAPHISEELWVLLG 739


>gi|255311009|ref|ZP_05353579.1| leucyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317310|ref|ZP_05358556.1| leucyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255506784|ref|ZP_05382423.1| leucyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525247|emb|CBJ14723.1| leucyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434795|gb|ADH16973.1| leucyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296435724|gb|ADH17898.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436648|gb|ADH18818.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437584|gb|ADH19745.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|296438515|gb|ADH20668.1| leucyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|297140083|gb|ADH96841.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 819

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++E+  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEIENGFS----VDGGYPVERRMLRQWVLRITAFADQLLE 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 81/299 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +        K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QVFYEAGIVSTPEPFKKLVNQGLVLATSYRIPGKGYIYPEIAKEENGKWVAPSGEELDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPQILIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M+  D            +++   LS+  +++Q + + ++   ++   +  + 
Sbjct: 649 RFLNRFYEMVSSDR--------VKEDNNFEGLSLAHKLVQRVTDAIEKLSLNTIPSSFME 700

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++      D  K     K+               +      L    P ++ +++ +L 
Sbjct: 701 FIN------DFVKLAVYPKS--------------AVEMAVRALAPIAPHISEELWVLLG 739


>gi|237749492|ref|ZP_04579972.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380854|gb|EEO30945.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 880

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 91/229 (39%), Gaps = 6/229 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K Y  + + YP+ + H+GH     I DV+ R+ R++G +VL   G D  G     AA 
Sbjct: 35  KGKFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAM 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+    +   N  + +     +   I +   +   +  ++   + ++ K+ +KG IY+
Sbjct: 95  AHGIPPAEWTYSNITHMKGQMASMGLAIDWSREMTACKPDYYKWNQWMFLKMLEKGIIYQ 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +   D+    +++V  G            ++  E   Y+ R++ Y ++L  Y  
Sbjct: 155 KTGTVNWDPVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYARITDYAEELRDYVT 210

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                     R  ++    KS     + +    D   ++  D +  ++ 
Sbjct: 211 DKLPGWPERVRTMQINWIGKSEGVRFAFTHDIHDTDGQLIGDGKLWVFT 259



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 30/190 (15%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N IDP   IE+ G D  R F +      +   +   G++         G   
Sbjct: 635 EKMSKSKNNGIDPQTQIEQYGADTARLFTMFASPPEQTLEWSGSGVE---------GASR 685

Query: 361 LVSRSVSMILKDYDG-----MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            + R  +   K+ +        P P    ES +++     +VLQ+  ++      +  ++
Sbjct: 686 FLRRVWAFAFKNKEMIEKAANQPLPKDLPESLKTLRREIHQVLQQANQDYARIQYNTVVS 745

Query: 416 QVISLVSEVDRYFDAQKPWELKKTN--PDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             + +++ +          E  K++  P+ A+    V  E +      L   VP +   +
Sbjct: 746 ACMKMLNTL----------EAAKSDNSPEFAA----VMRETLSIFLRTLYPVVPHITYVL 791

Query: 474 FDILFVADEN 483
           +  L     +
Sbjct: 792 WQELGYEKTD 801


>gi|238897458|ref|YP_002923135.1| valine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465213|gb|ACQ66987.1| valine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 972

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 132/403 (32%), Gaps = 88/403 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ M  + ++ R +    K +   E      +P +  N   S+++  ++D  +SR+   W
Sbjct: 381 IEPMLTDQWYVRAAPLARKAIEAVEKGEIEFVPKQYENMYYSWMRD-IQDWCISRQ-LWW 438

Query: 217 G--IKIPDDPQY----------------------------IMYVWIDALTNYLTTTGYLD 246
           G  I    D Q                             ++  W  +     +T G+ +
Sbjct: 439 GHRIPAWYDEQGQLYVGRDEAEVRRDYHLPDELPLRQDEDVLDTWFSSGLWTFSTLGWPN 498

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
           N         P  + V G DI+ F         L           +P      +      
Sbjct: 499 NTQALHTFH-PTSVIVSGFDIIFFWIARMIMLTLHFVKDKNHQPQMPFKTVYMTGLIRDE 557

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDP+++I+ +                                     G
Sbjct: 558 EGQKMSKSKGNVIDPLDMIDGISLTELIKKRTDNMMQPQLAEKIRQRTEKQFPNGIPPHG 617

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ L    + G+D  +D   L      +  N + N  SR V M  +  D       
Sbjct: 618 TDALRFTLTALASTGRDINWDMKRL--TGYRNFCNKLWN-ASRFVLMNTQGQDSGQNGGA 674

Query: 382 -AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELK 437
            + +  D  ILS     +Q  R+ +       A   +         D Y +  KP     
Sbjct: 675 QSLSLPDRWILSTFQNSIQSYRDALDQYRFDLAAHILYEFTWNQFCDWYLELSKPILNQT 734

Query: 438 KTNPDRAST---VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             NP++ +      +  + V+  L  L    +P +   ++  +
Sbjct: 735 PDNPEKEAQSRGTRHTLITVLEALLRLAHPIIPYITETLWQEI 777



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E+  I           H+GHA++  I D+L R+ R+ G + L+  GTD  G      
Sbjct: 37  TDQEQFCIMIPPPNVTGSLHMGHAFQQTIMDILIRYQRMQGKNTLWQVGTDHAGIATQMV 96

Query: 62  AQNAGVTT---------------KVFVD------QNSRNFRDMADVLDISYDDFIRTTEK 100
            +    +                K++        + +R  R + + +D   + F  T ++
Sbjct: 97  VERKIASEEGKTRHDYGREAFIQKIWDWKAESGGKITRQMRRLGNSVDWERERF--TMDE 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 +  + ++  +  IY+G     +  +     +D EV              P+
Sbjct: 155 DLSLAVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRESQGSMWYLRYPL 211


>gi|167816121|ref|ZP_02447801.1| valyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 955

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  A     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSAALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPEVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|319776933|ref|YP_004136584.1| valyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038008|gb|ADV34207.1| Valyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 832

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 138/353 (39%), Gaps = 45/353 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +L + +S        +R   VI      + D +
Sbjct: 342 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 401

Query: 209 LSRKTFDWGIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           +SR+   WG +I                       + ++  W  +     +  G+     
Sbjct: 402 ISRQ-LWWGHRIPAWYKDDKVKVQIESPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 460

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
             K +++P  L V G DI+ F    +Y+         P  + +         G+K+SKS 
Sbjct: 461 LLK-RYYPTSLLVTGYDIIFFWVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMSKSS 519

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DPI+VI E G DALR+F++   + G D  Y K+ +       L N + N+  R + 
Sbjct: 520 NNGVDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWNIA-RYIQ 576

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
           ++ +D           T +D  I +    + + I + MQN        ++   +      
Sbjct: 577 LLPED------KENKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFIYNDFSS 630

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            Y +      L K  P++ + +       ++ L ++   F+P + + ++ +LF
Sbjct: 631 WYVE------LLKIMPNKKAALDN-----LKSLLLIAHPFLPFITDHLYKVLF 672



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 19/140 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + HIGHA +  I D + R+ +L G DV +  G D  G       
Sbjct: 32  SKKPFTILLPPPNVTGKLHIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKV 91

Query: 63  QNAGVT-----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +N                        + ++ +  FR     L   + Y+    T + + +
Sbjct: 92  ENTIYQKEGLNRHDLGREKFLKRVWEWKEEYAELFRKQWASLGLALDYERERFTLDVKSN 151

Query: 104 DTCRILWKKISDKGDIYKGC 123
           +     +  +  KG IY G 
Sbjct: 152 EAVLKAFITLYKKGLIYHGT 171


>gi|116511631|ref|YP_808847.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025501|sp|Q030E7|SYL_LACLS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116107285|gb|ABJ72425.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 829

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 28  KTKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SYD    + TT+   +   + ++ K+ +KG 
Sbjct: 88  YAMDTGNDPAEFTAENIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 148 AYEAEVAVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 204

Query: 179 YYESHPEFILPIERRNEVI 197
             E         E +   I
Sbjct: 205 DLEEVDWPESIKEMQRNWI 223



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 97/300 (32%), Gaps = 82/300 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +     D    K W P D++V G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSSWYYLRYIDPHNTEALADPELLKEWLPVDIYVGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 546 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGGFYHMETGEELEQ 605

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E  G D LR + +          + ++GL+         G 
Sbjct: 606 APAKMSKSLKNVVNPDDVVEHYGADTLRVYEMFMGPLDASIPWSEEGLE---------GA 656

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R V MI    D    +     E D+    V +  ++ + E +     + A++Q++
Sbjct: 657 RKFLDRVVRMI----DNSEISDKNNGELDK----VYNETVKNVSERLDLMYFNTAISQLM 708

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++                       + +E       LL  F P +A +++  L 
Sbjct: 709 IFVNATNK--------------------AKILPLEYANGFVQLLAPFAPHIAEELWVKLG 748


>gi|269865054|ref|XP_002651788.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063873|gb|EED42268.1| methionyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 313

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 119/298 (39%), Gaps = 37/298 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K+++++A+ Y N QPH+G+    ++ ADV +RF R  G DV++ +GTDE+G  I   A+
Sbjct: 10  KKVFVTSALPYVNNQPHLGNIIGSLLSADVYSRFARRRGYDVVYISGTDEYGTAIEMEAE 69

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
               T +  V +N    +++ D  ++ +D F  T   +HH+  + ++  +       +  
Sbjct: 70  KQNTTPEQIVQKNRVLHKEVYDFFNLDFDYFGHTCTTKHHELVQNIF--LKTIDHFDEKE 127

Query: 124 YSGWYSLRDEAYYNDDEVYKGADG---QYYNAQHNPVQWME--EEGYFFRLSAYQDKLLS 178
            +  +  + + +  D  +          + +      ++ E  +E   FR S  +     
Sbjct: 128 INQMFCPKCKQFLADRYIEGECACGATTHGDQCDTCGRYHEDSQELTNFRCSICKTTPQI 187

Query: 179 YYESHPEFILPIERR---------------NEVISFVKSGLKDLSLSRK-TFDWGIKIPD 222
                  F L   +                    +++K  L    ++RK    WG+ +P 
Sbjct: 188 KTTKQLFFNLNELQHYFQTMDTTEWSANARAIYTAWMKKKLVPRCITRKLKHMWGVPVPL 247

Query: 223 DP--QYIMYVWIDALTNYLTTTGYL--------DNPDGSKAKFWPADLHVIGKDILRF 270
                 + YVW DA   YL+             D  +  K   W   +  +GK+   F
Sbjct: 248 KEYDDKVFYVWYDAPIGYLSFLQQKLESDQGTSDVFEWLKGSKW---VLFMGKETFHF 302


>gi|237804554|ref|YP_002888708.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272854|emb|CAX09764.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 819

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAQGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++E+  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEIENGFS----VDGGYPVERRMLRQWVLRITAFADQLLE 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 81/299 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +        K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QIFYEAGIVSTPEPFKKLVNQGLVLATSYRIPGKGYIYPEIAKEENGKWVAPSGEELDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPQILIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M+  D            +++   LS+  +++Q + + ++   ++   +  + 
Sbjct: 649 RFLNRFYEMVSSDR--------VKEDNNFEGLSLAHKLVQRVTDAIEKLSLNTIPSSFME 700

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++      D  K     K+               +      L    P ++ +++ +L 
Sbjct: 701 FIN------DFVKLAVYPKS--------------AVEMAVRALAPIAPHISEELWVLLG 739


>gi|148231881|ref|NP_001090690.1| isoleucyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|117558109|gb|AAI27374.1| LOC100036668 protein [Xenopus (Silurana) tropicalis]
          Length = 1259

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 101/277 (36%), Gaps = 11/277 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 523 VFDCWFESGSMPYAQVHYPFENRREFEDCFPADFIAEGIDQTRGWFYTLLVLSTALFGQP 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SKS  N  DP++VI   G DALR +L+       ++  + +
Sbjct: 583 PFKNVIVNGLVLASDGQKMSKSKKNYPDPMQVINSYGSDALRLYLINSPVVRAENLRFKE 642

Query: 344 DGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMI-----PTPGAFTESDESILSVCSR 396
           DG++  +             + +++  + K+ +            +    D+ I+S    
Sbjct: 643 DGVRDVLKDVFLPWYNAYRFLMQNIYRLHKEENIHFLFNESTKQQSNNIMDQWIISFTQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q  +  M    ++  + +++  V    + Y    +     ++  +     L     V+
Sbjct: 703 LVQFFKAEMSAYRLYTVVPRLVKFVDMLTNWYVRMNRRRLKGESGTEDCQMALETLFSVL 762

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
             +  L+  F P +   ++  L +  +    Q  D +
Sbjct: 763 FSMCRLMAPFTPFITEMMYQKLRLLIDPSSMQDKDTK 799



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 36  KNRPRYTFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVERRFGWDCHGLPVEYE 95

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---------TTEKRH 102
                        A +    +  Q        +   +IS     R         T     
Sbjct: 96  IDKTLGIKGPEDVAKMGIAEYNKQCRGIVMRYSQEWEISVTRLGRWIDFKNDYKTLYPWF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 METVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|307730435|ref|YP_003907659.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307584970|gb|ADN58368.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 973

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 121/363 (33%), Gaps = 59/363 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           Y+  L   QD  +S        I      N  I   ++       + +    G  +  D 
Sbjct: 426 YYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARTEEGAREKAAEAGYTG-PLKRDD 484

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     ++ G+ ++       F P+ + V G DI+ F    +       + 
Sbjct: 485 D-VLDTWFSSALVPFSSLGWPNDTQ-ELRHFLPSSVLVTGFDIIFFWVARMVMMTTHFTG 542

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------------- 319
            +P             +G+K+SKS GN +DPI++++                        
Sbjct: 543 KVPFNTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQAASI 602

Query: 320 --------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+ +      G++  +D    +     +  N + N  +R 
Sbjct: 603 EKKTRKEFPQGIAAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRF 659

Query: 366 VSMILKDYDGMIPTPGA-----------FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           V M  + +D     P             F+ +D  I+S+  RV  E+ +   +       
Sbjct: 660 VLMNCEGHDCGFGKPEQCGECGPQGHLHFSSADRWIVSLLQRVEAEVAKGFADYRFDNVA 719

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   V +   D Y +  K  +++   P++        + V+  +  L    +P +   
Sbjct: 720 NALYKFVWDEYCDWYLELAKV-QIQTGQPNQQRATRRTLLRVLETVLRLAHPVIPFITEA 778

Query: 473 IFD 475
           ++ 
Sbjct: 779 LWQ 781



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       + 
Sbjct: 58  KDFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVER 117

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
                                  +  Q+     +    L   I +     T + +     
Sbjct: 118 QLDAKGVSRHDLGREKFVERVWEWKQQSGSTITNQVRRLGASIDWSREYFTMDDKMSAAV 177

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 178 RDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIQYPL 228


>gi|224438465|ref|ZP_03659389.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144898|ref|ZP_07807091.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129929|gb|EFR47546.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 826

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 7/206 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++K YI +   YP+   H+GH     I D LAR +R  G +VL   G D  G     A
Sbjct: 33  SNKQKKYILSMFPYPSGAIHMGHVRNYCIGDALARHYRKSGYNVLHPMGWDAFGMPAENA 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A       K +   N    R     L +S+  +    T++  H    +  + K+ +KG I
Sbjct: 93  AIKHKSHPKTWTYSNIDTMRKELVTLGLSFSKEQEFATSDPIHTRFEQEFFIKMWEKGLI 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      Y   D+    +++V +G           PV       Y+ +++AY D+LL+ 
Sbjct: 153 YRKEAYLNYCPNDKTILANEQVIEGK----CWRCDTPVVQKLMFQYYIKITAYADELLTG 208

Query: 180 YES-HPEFILPIERRNEVISFVKSGL 204
            +     +   +            GL
Sbjct: 209 LDELEGHWPQQVLHMQRNWIGKSKGL 234



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 90/261 (34%), Gaps = 37/261 (14%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    T              S   +   D ++ G +    H +Y   F         + 
Sbjct: 513 WYFLRYTTPRELWEKQAFDKASLEYWLNVDEYIGGIEHAILHLLYARFFTKVLRDLGYVH 572

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            N P  K + + G +L  G K+SKS GNV++P ++I   G D  R F++      ++  +
Sbjct: 573 INEPF-KNLLTQGMVLKNGAKMSKSKGNVVNPNDIITRYGADTARLFILFAAPPMRELEW 631

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   L+          +    S +++   K     I T    ++ ++         LQ+ 
Sbjct: 632 NDSALEGAFR--FLKRLWERASNALTCEKK----PIITHSELSKQEQYARVKVYGALQKS 685

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            +           +  +A  +   + ++           ++ NP        V  E    
Sbjct: 686 NDIFSKKQSGYAFNTLIAASMEAFNALN-----------EQENPQ-------VWTEGYFI 727

Query: 458 LAILLQAFVPKLANKIFDILF 478
           L  +L+  VP +  ++ + LF
Sbjct: 728 LLHILEPIVPHICWELSNNLF 748


>gi|317477070|ref|ZP_07936312.1| isoleucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906863|gb|EFV28575.1| isoleucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 1162

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 102/274 (37%), Gaps = 12/274 (4%)

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--R 269
              G K       ++ VW D+ +       Y             +PAD    G D     
Sbjct: 618 VSKGGKPMKRESDLIDVWFDSGSMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGW 677

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F  ++  A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR+++
Sbjct: 678 FFTLHAIATMVFDSISYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSDPLRWYM 737

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +   +   +  +D DG+++                ++   +  ++            E D
Sbjct: 738 ITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEID 797

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDR 443
             ILSV + +++++          +A   +   V++   + Y   + ++ W    T  D+
Sbjct: 798 RWILSVLNTLVKDVDNCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFWGGGMT-QDK 856

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            S         +  +A L+    P  A+ ++  L
Sbjct: 857 LSA-FQTLYTCLETVAKLMAPIAPFYADMLYSDL 889



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 64/209 (30%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D+  D +I 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMK-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMTEWGTPYFLAWTTTPW 239


>gi|302683102|ref|XP_003031232.1| hypothetical protein SCHCODRAFT_82414 [Schizophyllum commune H4-8]
 gi|300104924|gb|EFI96329.1| hypothetical protein SCHCODRAFT_82414 [Schizophyllum commune H4-8]
          Length = 1031

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 135/417 (32%), Gaps = 87/417 (20%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                 +   + ++ + +  ++       ++ +    +    I P +  NE   +++ G+
Sbjct: 430 MQIPICSKSGDVIEPILKPQWWVNCKPLAEEAIKRTRAGELLIQPKQSENEWYRWLE-GI 488

Query: 205 KDLSLSRKTFDWGIKIP------------------------------------------- 221
           +D  +SR+   WG ++P                                           
Sbjct: 489 QDWCISRQ-LWWGHRVPAYFVNVEGAEQDKIDGKHWVVGRTLEEATERAKAFANGKPFTL 547

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
           +  + ++  W  +     +  G+ +N       F+P+ +   G DIL F         L 
Sbjct: 548 EQDEDVLDTWFSSGLWPFSIMGWPENTF-DYRNFYPSSILETGWDILFFWVARMVMLGLK 606

Query: 282 ANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
               +P ++V+ H  I    G K+SKSLGNVIDP++VI+   ++ L   L+      K+ 
Sbjct: 607 LTDQMPFREVYCHAMIRDAHGRKMSKSLGNVIDPLDVIQGCELEKLHAQLLEGNLDEKEI 666

Query: 340 -----------------------------------FYDKDGLKKRVNADLANGIGNLVSR 364
                                                + + L+        N I N    
Sbjct: 667 KKAKEGQKKDFPKGIPQCGTDALRFALCAYSGGGRDINLEILRVEGYRKFCNKIFNATKF 726

Query: 365 SVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
           ++  + + +         G  +  ++ IL   +   +E+   M  +    A     +   
Sbjct: 727 AMLKLDESFVPQPTAKPTGKESLVEKWILHKLNVAAKELNAQMTERNFMMATTAAYNFWL 786

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +A KP   +  + +   +        +     LL  F+P +  +++  L
Sbjct: 787 YELCDVYIEAMKPMTDEGASAETRRSAQETLYTCLDHGLRLLHPFMPFVTEELWQRL 843



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 43/146 (29%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               + +         HIGHA    I D L R+HR+ G   LF  G D  G       + 
Sbjct: 106 PTFVMPSPPPNVTGSLHIGHALTTAIQDSLVRWHRMRGYRTLFVPGFDHAGISTQSVVEK 165

Query: 65  AGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   + D       +    L  SYD      T +   +  
Sbjct: 166 RLFKLTGETRHDLGREKFVEKVGEWKDDYMSRISNQLRRLGGSYDWSRKAYTMDPPLYRA 225

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
               + ++ + G IY+      + +R
Sbjct: 226 VIENFCRLHEDGIIYRANRLVNWCVR 251


>gi|218131045|ref|ZP_03459849.1| hypothetical protein BACEGG_02648 [Bacteroides eggerthii DSM 20697]
 gi|217986749|gb|EEC53082.1| hypothetical protein BACEGG_02648 [Bacteroides eggerthii DSM 20697]
          Length = 1162

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 102/274 (37%), Gaps = 12/274 (4%)

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--R 269
              G K       ++ VW D+ +       Y             +PAD    G D     
Sbjct: 618 VSKGGKPMKRESDLIDVWFDSGSMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGW 677

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F  ++  A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR+++
Sbjct: 678 FFTLHAIATMVFDSISYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSDPLRWYM 737

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESD 387
           +   +   +  +D DG+++                ++   +  ++            E D
Sbjct: 738 ITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEID 797

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDR 443
             ILSV + +++++          +A   +   V++   + Y   + ++ W    T  D+
Sbjct: 798 RWILSVLNTLVKDVDNCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFWGGGMT-QDK 856

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            S         +  +A L+    P  A+ ++  L
Sbjct: 857 LSA-FQTLYTCLETVAKLMAPIAPFYADMLYSDL 889



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 64/209 (30%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D+  D +I 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMK-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMTEWGTPYFLAWTTTPW 239


>gi|58617028|ref|YP_196227.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311361|sp|Q5FHG5|SYL_EHRRG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58416640|emb|CAI27753.1| Leucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 830

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  GL V    G D  G     AA +  +
Sbjct: 28  YVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGLHVFHPIGWDAFGLPAENAALSYNI 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
           + +V+  +N  N R     + +SY  D    T +  ++   +  +      G  Y+    
Sbjct: 88  SPQVWTRKNIDNMRSQLKSIGLSYNWDKEFATCDAEYYKYEQEFFLDFLKYGLAYRKESL 147

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D+    +++V  G            ++  +   +F +++ +  +LL   +S  +
Sbjct: 148 VNWDPVDQTVLANEQVIDG----RGWRSGAIIEKRKLSQWFLKITDFAAELLDDLKSLNQ 203

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 204 WPEKVKLMQERWIGKSEG 221



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 128/404 (31%), Gaps = 80/404 (19%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            +          G   Q Y     P+ + ++ G            L       +   P++
Sbjct: 398 CKKQVYYRLHDWGISRQRYWGCPIPIIYCKKCGIVPVDKKDLPITLPEDIDFTKSGNPLD 457

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
                  + K         R+T  +                   + Y      +      
Sbjct: 458 NHPTW-KYTKCPSCGADAKRETDTFDT-------------FFESSWYFAAFCGIGKGIDK 503

Query: 252 K--AKFWPADLHVIGKDILRFHAIY--------WPAFLLSANLPL----PKKVFSHGFIL 297
               K  P D ++ G +    H +Y                  P      + +  H   L
Sbjct: 504 DVCNKLLPVDYYIGGIEHAVLHLLYSRFFCRALTRCGYFDVKEPFSSLITQGMVCHSTYL 563

Query: 298 HKG------------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            K                         EK+SKS  NV+   ++I++ G D+ R F++ + 
Sbjct: 564 DKYGNYLFPEDGKKMIQEGKYVTVGRAEKMSKSKKNVVHLDDIIDKYGADSARLFILSDT 623

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +  + ++         G+   +++   MI+ DYD +         S++++   
Sbjct: 624 PPERDIEWLDENIE---------GVSRYLNKLWKMIV-DYDQIEQNFVFNDISNDAVEYR 673

Query: 394 --CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++L +I  +++    + A+A+   L + +                  R S   +V 
Sbjct: 674 MNVHKILNDITNDLEFYRFNCAVAKFRELSNVISEMI--------------RLSINHHVV 719

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRL 493
            E I  L  +++ F+P +A K++ I+       N+ +  +D +L
Sbjct: 720 SEAIYILIRVVEPFIPHIAEKLWQIVGGQGMLCNQLWPKVDSQL 763


>gi|223993195|ref|XP_002286281.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977596|gb|EED95922.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1083

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 23/284 (8%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                    M VW D+ +++   T      D      +PAD+++ G D     F +    
Sbjct: 620 DKWTKGSDTMDVWFDSGSSWAGVTQ--QRADEDMGLGYPADIYLEGSDQHRGWFQSSLLT 677

Query: 277 AFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEV---------IEEVGVDALR 326
           +   +      K V +HGF+L  KG K+SKSLGNV++P++V             G D LR
Sbjct: 678 SVAANKGQAPYKSVLTHGFVLDEKGFKMSKSLGNVVNPLQVIEGGNNKKLEPAYGADVLR 737

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
            ++      G D     + +K+   +     + N     +   L D++    +       
Sbjct: 738 LWVASVDYAG-DVRVGANIIKQTFES--YRKLRNTARYLIG-NLADFNPATDSIPYEDLP 793

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT-NP 441
             D+ +L   S VL E+ + M      RA  +++        + Y D  K        N 
Sbjct: 794 SMDKWMLGTLSSVLNEVDDAMSQYQFSRATQELLRFSTSDLSNFYLDVAKDRLYISAVND 853

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            R  +   V   ++   A  +   +P +A  I+  L    E+  
Sbjct: 854 ARRRSCQTVLHSLLEGFAKSIAPILPHMAEDIWQNLPYKKESDS 897



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           E+  +     Y N   HIGHA   ++ D + R   L G  V +  G D HG  I      
Sbjct: 127 ERFILHDGPPYANGDLHIGHALNKLLKDFINRHQILKGKQVHYVPGWDCHGLPIELKVLQ 186

Query: 60  --KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---------TTEKRHHDTCRI 108
             K+ +   +T     ++ +   ++  +    S+  +           T    +      
Sbjct: 187 TMKSKEREALTPVTLREKAASFAKETVEKQSASFQRYGVIGDFGNPYLTLLPEYEAAQIR 246

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++   G I++G     +S   +    + E+  
Sbjct: 247 VFGEMYKAGHIFRGRKPVHWSPSSKTALAEAELEY 281


>gi|190347704|gb|EDK40029.2| hypothetical protein PGUG_04127 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1065

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 118/354 (33%), Gaps = 44/354 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E        NE     ++  + L  ++K         +  
Sbjct: 528 WCISRQLWWGHRCPVYYIKVEGETEDRLDNEKWVAGRTYEEALEKAKKRCPDSKFELEQD 587

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +    L+T G+  N       F P  +   G DIL F    +   +  L+ 
Sbjct: 588 EDVLDTWFSSGLWPLSTLGWPHNTR-DMQLFSPLSMLETGWDILFFWVSRMILLSLKLTG 646

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K+VF H  +   +G K+SKSLGNVIDPI+VI  + +  L   L       ++   
Sbjct: 647 KAPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPIDVITGIPLQTLHDKLRTGNLDPRELKK 705

Query: 342 DKDGLKKRV-------------------------------NADLANGIGNLVSRSVSMIL 370
            ++G K                                    +      N + ++   +L
Sbjct: 706 AEEGQKASYPNGIPECGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFVL 765

Query: 371 KDYDGMIPTP------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE 423
                    P      G  +  ++ IL   +   + + E++  +    A   + +     
Sbjct: 766 GRLGDDYKPPASSNLTGKESLVEKWILHKLTHTNKAMSESLDKRDFFEATNAIYNFWYDL 825

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   ++  +P++  +        I     L+  F+P +  +++  L
Sbjct: 826 CDVYIENSKS-LIQDGSPEQKKSAQDTLYTCIDSALKLIHPFMPFVTEEMWQRL 878



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + + D L R++R+ G   LF  G D  G       +   
Sbjct: 146 FTIPAPPPNVTGALHIGHALTVALQDTLIRYNRMKGKTTLFIPGFDHAGIATQSVVEKQL 205

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + +   +  +D    L  SYD      T   +  +   
Sbjct: 206 WANEKKTRHDFGREKFVEKVWDWKEIYHQRIKDQFKRLGASYDWSREAFTMSPQLSEAVV 265

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ + G IY+      +S++
Sbjct: 266 EAFVRLHEDGTIYRASRLVNWSVK 289


>gi|62185201|ref|YP_219986.1| leucyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312636|sp|Q5L5Q6|SYL_CHLAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|62148268|emb|CAH64033.1| putative leucyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 820

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD      T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTKKNIENFRKQLSAMGFSYDEAREFATSDPEYYRWTQKLFLFLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  Y         ++EV  G           PV+      +  R++AY D+LL  
Sbjct: 149 YMADMAVNYCEELGTVLANEEVENG----LSIEGGYPVERRMLRQWILRITAYADQLLQG 204

Query: 180 YESHPEFILPIERRNEVISFVKSGL 204
            E         + +   I   +  L
Sbjct: 205 LEDLDWPENVKQLQRNWIGKSEGAL 229



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 102/313 (32%), Gaps = 83/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +          ++W P DL++ G +    H +Y   W 
Sbjct: 479 ETHTMPQWAGSCWYYLRFCDAHNSQAPWSHENERYWMPVDLYIGGAEHAVLHLLYSRFWH 538

Query: 277 AFLLSANL-----PLPKKV----------------FSHG---------FILHKGE----- 301
                A L     P  K +                + H          +    GE     
Sbjct: 539 RVFYEAGLVSTPEPFKKLINQGLVLATSYRIPGKGYVHPEDAREDNGKWTTASGEELEVR 598

Query: 302 --KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
             K+SKS  N +DP  +I+E G DALR + +      K+  +   G+          G  
Sbjct: 599 QEKMSKSKLNGVDPQILIDEFGADALRMYAMFSGPLDKNKLWCNQGVS---------GCR 649

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   +          +       D   +++  R++ ++ E+++   ++   +  + 
Sbjct: 650 RFLNRFYELAT--------SSAVQDIDDPKGMALAHRLVHKVGEDIEKMSLNTIPSSFME 701

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            ++E                     + +   +   +  +   L    P ++ +++ +L  
Sbjct: 702 FINEF--------------------AKLDTYSKSALSMVVRALAPIAPHISEELWTVLGY 741

Query: 480 AD--ENRCFQSLD 490
           A   +N  +  +D
Sbjct: 742 APGIDNAGWPEVD 754


>gi|330685460|gb|EGG97115.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 804

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPNYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPTLGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LEDLDWPESIKDMQRNWIGRSE 226



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 42/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNDKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVNSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL         +G    + R   +I+K  +    +      +++S+    
Sbjct: 609 LDAAIAWSDKGL---------DGSRRFLDRVWRLIVK--EDGSLSDKIVETNNKSLDKTY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  +++  +  +  KP+                    
Sbjct: 658 NQTVKKVTEDFDTLGFNTAISQLMVFINDCYKADEIYKPY-------------------- 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           I     +L    P +  +++D L  +D
Sbjct: 698 IEGFVTMLAPIAPHIGEELWDTLGHSD 724


>gi|265763886|ref|ZP_06092454.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263256494|gb|EEZ27840.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 1141

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 113/326 (34%), Gaps = 13/326 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE Y     +     +       +  +P E   E  + +      +         G  + 
Sbjct: 546 EELYNEIEKSVAAGYMQSNPYKDKGFVPGEYNEENYNKIDLHRPYVDDIILVSKDGKPMK 605

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPA 277
            +   ++ VW D+         Y             +PAD    G D     F  ++  A
Sbjct: 606 READ-LIDVWFDSGAMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIA 664

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   
Sbjct: 665 TMVFDSVSYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEQYGSDPLRWYMITNSSPWD 724

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           +  +D DG+++                ++   +  ++            E D  ILSV +
Sbjct: 725 NLKFDVDGIEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADLPMNERPEIDRWILSVLN 784

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVT 451
            +++E+          +A   +   V++   + Y   + ++ W           +     
Sbjct: 785 TLVKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGGFTQDKLSAYQTL 842

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +  +A L+    P  A++++  L
Sbjct: 843 YTCLETVAKLMAPIAPFYADRLYSDL 868



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 66/447 (14%), Positives = 129/447 (28%), Gaps = 61/447 (13%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV------DQNSRNFRDMADVLDISYDDFIR-------------TT 98
           +    + +   TK  +       + + + R         ++D                T 
Sbjct: 94  VELGVEKSLGITKEDIGKTISVAEYNAHCRQDVMKFTKEWEDLTHKMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +     ++ +       + +      P    +     V   +  +++       G 
Sbjct: 213 QFKMKNPKPEMAQWGTPYFLAWTT-----TPWTLPSNTALCVGPKIDYVAVQSYNAYTGQ 267

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVI--GKDILRFHAI 273
            I         V   AL N        +          K  P  +     G D++     
Sbjct: 268 PITV-------VLAKALLNAHFNPKAAELKLEDYKAGDKLVPFKVIAEYKGPDLVGMEYE 320

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGE---KISKSLG---------NVIDPIEVIEEVG 321
               ++        + +         G     I+ + G           I P++++ + G
Sbjct: 321 QLIPWVNPGEGAF-RVILGDYVTTEDGTGIVHIAPTFGADDAQVAKAAGIPPLQLVNKKG 379

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
              LR  +            D+D +K+RVN DL          +   +   YD  +    
Sbjct: 380 --ELRPMVDLTGKFYTLDELDEDFIKQRVNVDLYKEY------AGRFVKNAYDPNLSDQD 431

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQ 408
              +    ++   +    +I +++ N 
Sbjct: 432 ESLDVSICMMMKVNNQAFKIEKHVHNY 458


>gi|253574671|ref|ZP_04852011.1| leucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845717|gb|EES73725.1| leucyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 813

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+++RF R+ G +VL   G D  G    +
Sbjct: 36  SGKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRFKRMRGYNVLHPMGWDAFGLPAEQ 95

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   +    +N  NFR     L  SY  D  I TT+  ++   + ++ ++  KG 
Sbjct: 96  HALDTGEHPRDITVKNINNFRRQIKSLGFSYDWDREISTTDPNYYKWTQWIFIQLYKKGL 155

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++ Y ++LL 
Sbjct: 156 AYVAEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVIRKPMRQWVLKITEYAERLLE 211

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 212 DLEELDWSESIKDMQRNWIGKSE 234



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 41/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+      +     K + W P DL++ G +    H +Y   +    
Sbjct: 499 PQWAGSCW--YYLRYIDPHNDKELCSKEKQQEWLPVDLYIGGAEHAVLHLLYARFWHKVL 556

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                ++   P  K V     +    EK+SKS GNVI+P E++ + G D LR + +    
Sbjct: 557 YDLGVVTTKEPFQKLVNQGMILGTNNEKMSKSRGNVINPDEIVNQYGADTLRVYEMFMGP 616

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +++ G++         GI   +SR   + + +   + P   A   SDE      
Sbjct: 617 LEATKPWNESGVE---------GIHRFLSRVWRLFVAEDGSLNPKITADGGSDE-FKRTW 666

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +N   + A++Q++  V+E              KT+      V     E 
Sbjct: 667 HKTIKKVTEDFENLRFNTAISQLMIFVNEA------------YKTD-----AVPKAAAE- 708

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
                 +L    P LA ++++ L   D
Sbjct: 709 --NFVQMLSPLAPHLAEELWERLGHTD 733


>gi|15618077|ref|NP_224361.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835688|ref|NP_300212.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752890|ref|NP_445160.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241489|ref|NP_876430.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6919982|sp|Q9Z930|SYL_CHLPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4376420|gb|AAD18306.1| Leucyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189530|gb|AAF38433.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978526|dbj|BAA98363.1| leucyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33235997|gb|AAP98087.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 820

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 7/212 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  EDKVKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRARGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   KV   +N  NF+     +  SYD      T++  ++   + L+  + D+G 
Sbjct: 88  YAIRTGTHPKVTTQKNIANFKKQLSAMGFSYDEGREFATSDPDYYHWTQKLFLFLYDQGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++EV  G           PV+      +  +++AY DKLL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEVENGFS----IEGGYPVERKMLRQWILKITAYADKLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             ++        + +   I   +  L    L+
Sbjct: 204 GLDALDWPENVKQLQKNWIGKSEGALVTFHLT 235



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 99/316 (31%), Gaps = 83/316 (26%)

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY--- 274
               Y M  W  +   YL      +        K  +W P DL++ G +    H +Y   
Sbjct: 477 CRETYTMPQWAGSCWYYLRFCDAHNSQLPWSKEKESYWMPVDLYIGGAEHAVLHLLYSRF 536

Query: 275 WPAFLLSANL-----PLPK------------------KVFSHGFILHKG----------- 300
           W      A L     P  K                   V         G           
Sbjct: 537 WHRVFYDAGLVSTPEPFKKLINQGLVLASSYRIPGKGYVSIEDVREENGTWISTCGEIVE 596

Query: 301 ---EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
              EK+SKS  N +DP  +IEE G DALR + +      K+  +  +G+          G
Sbjct: 597 VRQEKMSKSKLNGVDPQVLIEEYGADALRMYAMFSGPLDKNKTWSNEGV---------GG 647

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
               ++R   ++         +       D   L +  +++  I E+++   ++   +  
Sbjct: 648 CRRFLNRFYDLVT--------SSEVQDIEDRDGLVLAHKLVFRITEHIEKMSLNTIPSSF 699

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  +++  +                    +   +   +     +L+   P ++ +++ IL
Sbjct: 700 MEFLNDFSK--------------------LPVYSKRALSMAVRVLEPIAPHISEELWVIL 739

Query: 478 FVAD--ENRCFQSLDQ 491
                 +   +  +D+
Sbjct: 740 GNPPGIDQAAWPQIDE 755


>gi|169834477|ref|YP_001693783.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688307|sp|B1I8Y2|SYL_STRPI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168996979|gb|ACA37591.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 833

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|195977313|ref|YP_002122557.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689784|sp|B4U0A1|SYL_STREM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|195974018|gb|ACG61544.1| Leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLAD 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++         K W P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEQLADKDLLKQWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVDKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+         G 
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLE---------GA 657

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++       ++ + E ++    + A+AQ++
Sbjct: 658 RKFLDRVYRLIT--------TKEIVAENSGALDKAYHETVKAVTEQIEGMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D             +    LL  F P L  +++ IL 
Sbjct: 710 IFVNAANK--------------EDELYVAYA------KGFVQLLAPFAPHLGEELWQILT 749

Query: 479 VADENRCFQSLDQ 491
            + ++  + +   
Sbjct: 750 ASGQSISYVAWPT 762


>gi|149001632|ref|ZP_01826605.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237649676|ref|ZP_04523928.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821376|ref|ZP_04597221.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147760090|gb|EDK67079.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTSENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNATN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|331267104|ref|YP_004326734.1| leucyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683776|emb|CBZ01394.1| leucyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|312080189|ref|XP_003142494.1| hypothetical protein LOAG_06912 [Loa loa]
 gi|307762342|gb|EFO21576.1| hypothetical protein LOAG_06912 [Loa loa]
          Length = 877

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 5/207 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K YI +   YP+ + H+GH     I+D LAR+++L+G +V+   G D  G     AA
Sbjct: 65  SRPKKYILSMYPYPSGRLHMGHMRVYTISDALARYYKLNGYNVIHPIGWDAFGLPAENAA 124

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +  GV    +   N    R       I +D    I T    ++   + ++ ++ ++G + 
Sbjct: 125 REVGVDPAQWTASNIDVMRQQLLSTGIIFDWNREISTCSPDYYRWTQWIFCRLFERGLVR 184

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D      +++          A     +  + + +      Y  ++    
Sbjct: 185 RALSEVHWDPIDSTVLAAEQIDAEGRSWRSGAIA---EKRKMKHWMIETPKYAKRMYDGL 241

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDL 207
           E    +      +   I         L
Sbjct: 242 EKLTHWKEVAAIQANWIGKCNVWRFLL 268



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 70/182 (38%), Gaps = 22/182 (12%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           + EK+SKS  N +DP+ V++  G+D  R  L+ E A  +   +    LK           
Sbjct: 583 QFEKMSKSKHNGVDPLSVLKLKGIDLTRLQLLNEAAPREPINWGDTELKG------LFKF 636

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIH-RALA 415
               S  VS  ++ +     T     +   +E   ++ +  ++ I   ++   +H  A+ 
Sbjct: 637 MERTSDVVSFYVEQHALATSTSPEPLDIAEEEKYRTIYNFYVRNISMVIEVLHLHNTAID 696

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            + + V  +             K  P  +          +R L I+LQ F P LA + + 
Sbjct: 697 HLQAFVKFL-------------KRTPAESYRRSEQVERCVRALVIMLQLFTPHLAAEYWA 743

Query: 476 IL 477
            L
Sbjct: 744 AL 745


>gi|308804716|ref|XP_003079670.1| Isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058126|emb|CAL53315.1| Isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 880

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 77/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D++AR+ R+ G +VL   G D  G    + 
Sbjct: 51  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVARYKRMTGHNVLHPMGWDAFGLPAEQY 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N   FR+    L  SY  D  + T + +++   + ++ ++ +K   
Sbjct: 111 AIETGTHPSQTTVKNVGRFREQLQSLGFSYDWDREVATCDAKYYKWTQWIFLRLLEKNLA 170

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G         ++PV     + +  +++ Y D+LL  
Sbjct: 171 YQAEVPVNWCPALGTVLANEEVIDG----LSERGNHPVIRKPMKQWMLKITEYADRLLED 226

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         E +   I   +
Sbjct: 227 LDELDWPDSIKEMQRNWIGKSE 248



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 75/183 (40%), Gaps = 38/183 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV++P +++   G D+LR + +      +   +   G++         G   
Sbjct: 655 HKMSKSRGNVVNPDDIVSAYGADSLRLYEMFMGPLRETKVWQTKGVE---------GCFR 705

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            ++R+  ++ K  D            DE  L   ++ + ++ E  +    + A++ ++ L
Sbjct: 706 FLARTHRLMDKMTDDKP---------DEEGLKALNKCIAKVTEETEQMRFNTAISAMMEL 756

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +   +                    +  V+ +++   ++LL  + P L+ ++++ L  +
Sbjct: 757 TNACTK--------------------MDKVSRDILEPFSLLLSPYAPHLSEEMWERLGHS 796

Query: 481 DEN 483
             N
Sbjct: 797 GSN 799


>gi|297565474|ref|YP_003684446.1| leucyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849923|gb|ADH62938.1| leucyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 875

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
             +K YI     YP+   H+GH     + DVLARF    G  VL   G D  G     AA
Sbjct: 30  SEKKSYILVMFPYPSGDLHMGHLKNYTMGDVLARFRTQQGYSVLHPFGWDAFGLPAENAA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV+   +   N +  ++   ++ I YD    + T    ++   + ++ K+ ++G  Y
Sbjct: 90  LKFGVSPADWTFGNIQQSKESLALMGIQYDWSREVTTCTPEYYKWNQWIFLKMYERGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   +++   +++V  G            V+  E E ++ +++ Y ++LL+  
Sbjct: 150 RKKSYVNWDPVEQSVLANEQVIDG----RGWRSGALVEKRELEQWYLKITDYAERLLADL 205

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P +   ++          +G
Sbjct: 206 DKLPRWPEKVKAMQRAWIGKSTG 228



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 28/211 (13%)

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K   +SKSLGN +     ++E G D  R  ++       +  + ++G++           
Sbjct: 629 KPATMSKSLGNGVMVGPFVKEQGADIARITILFAAPPENEMIWTEEGVQGSW-------- 680

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE-----SDESILSVCSRVLQEIRENMQNQLIHRA 413
              ++R    + +D   +  T   F       +D+++     + L+++ E+++    + A
Sbjct: 681 -RYLNRVWRRVAEDRAELGKTSDHFEAQALGGADKALYQKLHQTLKKVGEDIEALRFNTA 739

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A ++ L++ +  Y         +K NP     V  V    IR    +L  F P LA ++
Sbjct: 740 VAALMELLNTLYDY---------RKENP-----VSPVYRTAIRYYLQMLAPFAPHLAEEL 785

Query: 474 FDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           +           F +    + P  +L  +F+
Sbjct: 786 WHWFDWGQGQSVFAARWPEVDPEALLADSFE 816


>gi|14285783|sp|Q9RSF0|SYL_DEIRA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 823

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 70/193 (36%), Gaps = 6/193 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK Y  T   YP+   HIGH Y  +  D  AR+ R+ G +VLF    D  G     AA  
Sbjct: 46  EKFYALTMFPYPSGNLHIGHWYANVAPDARARWLRMRGYNVLFPMAFDAFGLPAENAAIK 105

Query: 65  AGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +   N          +   I +     T +  ++   +  + +   +G  YK 
Sbjct: 106 NNTNPATWTYANIERMTGQFSRMGTMIDWSRKFATCDPEYYRWNQWFFIEFWKRGLAYKK 165

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V  G            V+      ++ +++ Y ++LL +  +
Sbjct: 166 GGLVNWCPKDQTVLANEQVVNGH----CERCGTAVERRNLSQWYLKITDYAEELLDFSAT 221

Query: 183 HPEFILPIERRNE 195
                +   + N 
Sbjct: 222 DMPEKVRAMQTNW 234



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 108/300 (36%), Gaps = 40/300 (13%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LP              L +   +      G     +    M  ++D  + Y+      + 
Sbjct: 466 LPENVAFTPTGQSPLKLDEEWKTTTCPCCGGPAERETD-TMDTFVD-SSWYMYRYLSPNY 523

Query: 248 ----PDGSKAKFWPADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFS-----HGF 295
                D SKA   P DL+  G +    H +Y   W   +    L    + F+        
Sbjct: 524 DGGPFDPSKAGLLPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMV 583

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +   GEK+SKS GNV+DP +++ E G D +R FL+        G +D  G+         
Sbjct: 584 LGEDGEKMSKSRGNVVDPDDLVREYGADTVRAFLMFIAPWELGGPWDPQGI--------- 634

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG    +SR  ++  +  + +         +D  +       L+++ ++ +    +  ++
Sbjct: 635 NGPSKWLSRVWNVFFE--EKVSGPEEKMQGAD--VRFAVHSALKKVNDDFERMSFNTIIS 690

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            ++ L + +             K +P   + V     E +     +L   VP +A +I+ 
Sbjct: 691 TLMELTNAL----------VKAKRSPVFGTPVWE---EALDIFNRMLAPVVPHIAEEIWH 737


>gi|306828817|ref|ZP_07462009.1| leucine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428995|gb|EFM32083.1| leucine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P EV+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDEVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
           V  E+  + +    
Sbjct: 750 VTGESISYVAWPTW 763


>gi|300703479|ref|YP_003745081.1| valine--tRNA ligase [Ralstonia solanacearum CFBP2957]
 gi|299071142|emb|CBJ42455.1| Valine--tRNA ligase [Ralstonia solanacearum CFBP2957]
          Length = 970

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 78/528 (14%), Positives = 157/528 (29%), Gaps = 108/528 (20%)

Query: 29  IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           II D      R  G  V+  T   +          N     ++ V        D A    
Sbjct: 276 IIGDAYV--DREFGTGVVKVTPGHDFNDYAVGQRHNL---PQISVLTLEAKIADTAPATY 330

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
              D F         +  + +   +   G + +         R +      E        
Sbjct: 331 RGQDRF---------EARKRIVVDLETLGLLAEVKKHMLMVPRGDRTGVIIEPMLTDQWF 381

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
              ++  P      +G  F   +  +  L   +     ++P +  N   +   + ++D  
Sbjct: 382 VAMSKPAP------DGTRFPGRSIAEVALDAVQGGKIKLVPEQWVNT-YNQWLNNIQDWC 434

Query: 209 LSRKTFDWG--IKIPDDP-----------------------------QYIMYVWIDALTN 237
           +SR+   WG  I    D                                ++  W  +   
Sbjct: 435 ISRQ-LWWGHQIPAWYDEAGNVYVARTEEDARAQAAARGHTGALTRDDDVLDTWFSSALV 493

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
             ++ G+  +    K  F P+ + V G DI+ F    +       +  +P          
Sbjct: 494 PFSSLGWPADTPELK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFQTVYVHGLV 552

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE------------------------------------ 319
              +G+K+SKS GN +DP+++I+                                     
Sbjct: 553 RDSEGKKMSKSEGNTLDPVDLIDGIALEPLLAKRTTGLRRPKDAPNVEKRTRKEFPDGIP 612

Query: 320 -VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G DALR+        G++  +D    +     +  N + N  +R V M  +  D  + 
Sbjct: 613 AFGADALRFTFASLATLGRNINFDSSRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGLQ 669

Query: 379 TPG---------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                        F+ +D  I+S+  RV  E+ +   +         +   V +   D Y
Sbjct: 670 ECIGDCGPEGALHFSPADRWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWY 729

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  K  +++   P +        + V+  +  L    +P +  +++ 
Sbjct: 730 LELAKV-QIQTGTPAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 776



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 38  GRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMQGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGVSRHDLGRPAFVDKVWEWKAQSGSTITRQIRRMGASIDWEHEYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               ++ ++ ++G IY+G     +        +D EV    +         P+   + +
Sbjct: 158 AVSDVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEEGALWHIRYPLSQPDTK 216


>gi|168493951|ref|ZP_02718094.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576165|gb|EDT96693.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 104/316 (32%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E + +   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIDSLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENR---CFQSLDQ 491
              E+     + + D+
Sbjct: 750 ATGESISYVTWPTWDE 765


>gi|168484637|ref|ZP_02709589.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042170|gb|EDT50216.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNATN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|297194898|ref|ZP_06912296.1| isoleucyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152519|gb|EFH31812.1| isoleucyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 1046

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/402 (13%), Positives = 126/402 (31%), Gaps = 15/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G+Y +  +N + W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLAENEATNWFPDSVKQGRYGDWLNNNIDWAL 454

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    + H   +  +   +E+     S L           +     
Sbjct: 455 SRNRYWGTP---LPIWRCEDDHLTCVGSLAELSELTGTDHSDLDPHRPYIDAVTFDCPQC 511

Query: 222 DDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    ++  W D+ +      GY         K +PA       D     F+ +  
Sbjct: 512 SATATRVPEVIDAWYDSGSMPFAQWGYPYKNKEIFEKRYPAQFISEAIDQTRGWFYTLMA 571

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 572 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 631

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P   T  D  +LS 
Sbjct: 632 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSTADPAPAERTVLDRWLLSE 691

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              ++ ++ + M+     RA   + + V ++  ++  +      + +     T      +
Sbjct: 692 LHALVDQVTQAMEAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDAAALRT----LHD 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+    P +  +++  L         +S+     P
Sbjct: 748 VVETITRLMAPLTPFITERVWQDLVAPVTPDAPESVHLASWP 789



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFSGKKDIEAYGIAEFNAKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPDY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             +     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 160 VQSVWWSLKEIFNKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|167465762|ref|ZP_02330851.1| leucyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 616

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+R+ R+ G +VL   G D  G    +
Sbjct: 35  SGKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRMRGYNVLHPMGWDAFGLPAEQ 94

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   +    +N   FR     L  SY  D  I TT+  ++   + ++ ++  KG 
Sbjct: 95  HALDTGEHPRDITVKNINTFRRQIKSLGFSYDWDREISTTDPNYYKWTQWIFIQLYKKGL 154

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++ Y ++LL 
Sbjct: 155 AYVDEIPVNWCEALGTVLANEEVIDGKS----ERGGHPVIRKPMRQWVLKITEYAERLLD 210

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   K
Sbjct: 211 DLEELDWPESLKDMQRNWIGKSK 233



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+      +     K   W P DL++ G +    H +Y   +    
Sbjct: 498 PQWAGSCW--YYLRYIDPHNDKELCSFEKQMEWLPVDLYIGGVEHAVLHLLYARFWHKVL 555

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                ++   P  K V     +    EK+SKS GNV++P  +++E G D LR + +    
Sbjct: 556 YDLGIVTTKEPFHKLVNQGMILGENMEKMSKSRGNVVNPDVIVDEYGADTLRLYEMFMGP 615


>gi|88855054|ref|ZP_01129719.1| leucyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815582|gb|EAR25439.1| leucyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 868

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 5/182 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + YI     YP+   H+GHA      D+ AR+ R  G +VL   G D  G     AA
Sbjct: 47  KRPRKYILDMFPYPSGDLHMGHAEAYAFGDIAARYWRQRGFNVLHPIGWDSFGLPAENAA 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G+  + +   N    +    +  +S+  D  + T++  ++   + L+ K+ +KG  Y
Sbjct: 107 IERGIDPRGWTYDNIDQQKKSMKLYGVSFDWDRVLHTSDPEYYKWNQWLFLKMYEKGLAY 166

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V      +   A    V   +   ++ +++ Y D+LL   
Sbjct: 167 RKDSWVNWDPVDQTVLANEQVLADGTSERSGA---VVVKKKLTQWYLKITDYADRLLDDL 223

Query: 181 ES 182
             
Sbjct: 224 NQ 225



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 35/264 (13%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIY--------WPAFLLSANLPLPKKVFSHGFILHKGEK 302
              K+ P D +V G +    H +Y        +    +S   P    + + G +L +G+K
Sbjct: 569 EAEKWAPVDQYVGGVEHAILHLLYSRFITKVLFDLGYVSFTEPF-SALLNQGMVLSEGKK 627

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK     +     I E G DALR  L        +   + + +               +
Sbjct: 628 MSKRSRKAVTFSGEIAEHGADALRLTLAFAGPP--EDNINWEDVS-------PPASHKFL 678

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R+  ++    D        +   D ++     R L +     ++   +  +A+++ LV+
Sbjct: 679 ARAFRLVR---DVSSAPEIEWKTGDSALRRATHRFLADGPGLAESLKFNVLVARIMDLVN 735

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +  D+           D A        E    + I L  F P  A ++++ L    E
Sbjct: 736 VTRKVIDSGA------GGGDAA------VREAAEVITIALSLFAPHTAEEMWEKLGY--E 781

Query: 483 NRCFQSLDQRLKPGFMLHKTFDPI 506
                +  ++  P  ++ ++   +
Sbjct: 782 PTVALAGWRKADPSLLVEESVTAV 805


>gi|302346352|ref|YP_003814650.1| isoleucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150916|gb|ADK97177.1| isoleucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 1221

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 109/308 (35%), Gaps = 40/308 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           K       ++ VW D+ +       Y    + +                           
Sbjct: 664 KPMHRESDLIDVWFDSGSMPYAQLHYPFEGEINAEGLKATGKTEAEYRDQLVHSCYEGIA 723

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK +G
Sbjct: 724 VPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVG 783

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVS 367
           NV +P E++ + G D +R++++       +  +D +G+ +         + N  S  ++ 
Sbjct: 784 NVTNPFEMMNKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFALY 842

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
             +  YD            E D  I+S  + +++ +   +++    RA   + S V    
Sbjct: 843 ANVDGYDATTCEAVKADAPEIDRWIISKLNSLIKGVTAELEDFDPTRAGRLIDSFVNNDL 902

Query: 424 VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y   + ++ W   K       +        +  +A LL  F P  A++++  L    
Sbjct: 903 SNWYVRLNRKRFW--GKEMSADKKSAYDTLYTCLMTVARLLAPFAPFYADQLYSDLGGNS 960

Query: 482 ENRCFQSL 489
           E+      
Sbjct: 961 ESIHLDRW 968



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGDPQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMQGFQVHRKAGWDTHGLPVELG 97

Query: 62  AQNA----------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--T 97
            +                            +  V + +  ++ + + +    D      T
Sbjct: 98  VEKELGITKKDIDNHASDKYISTEEYNHKCRENVMKFTAEWKQLTEEMGYFVDMEHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKGLLYKGYTIQPYSPGAGTGLSSHELNQPGC 206


>gi|83589714|ref|YP_429723.1| isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725741|sp|Q2RK59|SYI_MOOTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83572628|gb|ABC19180.1| Isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 930

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 132/423 (31%), Gaps = 52/423 (12%)

Query: 99  EKRHHDTCRILWKK--ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ--H 154
           ++ +    + L  +  +   G I       W       +   ++ +   +G    A    
Sbjct: 368 DEANKAVVKELEARGALLHFGFIKHQYPHCWRCKHPIIFRATEQWFASIEGFRQEALEAI 427

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR----------NEVISFVKSGL 204
             V+W+   G     +   D+          + +PI             N+        L
Sbjct: 428 KKVKWIPSWGEDRIYNMVADRSDWCISRQRTWGVPIPIFYCANCGREIINDATISHLQEL 487

Query: 205 KDLSLSRKTF---------------DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
                S   F               + G K       IM VW D+ +++           
Sbjct: 488 FRKHGSNVWFAREAGELVPPGLKCPECGSKEFRKETDIMDVWFDSGSSHAAVLATRP--- 544

Query: 250 GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                 WPADL++ G D     F++    A       P  + +     +  +G K+SKSL
Sbjct: 545 ---ELAWPADLYLEGSDQHRGWFNSSLSTAVATRGRAPYRQVLTHGFLVDEEGRKMSKSL 601

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN IDP +VI + G D LR ++       +D    ++    R   +    I N   R + 
Sbjct: 602 GNGIDPADVIRQRGADVLRLWVASADY-RRDVAASEN--IMRQITEAYRKIRNTC-RFLL 657

Query: 368 MILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSE 423
             L D+D            E D   ++   R++  +     +   H     + +   V  
Sbjct: 658 ANLADFDPGKDQVPREEMLELDRWAMNRLQRLIARVTMAYDDYEFHVVYHTIHNFCAVDL 717

Query: 424 VDRYFDAQKP----WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              Y D  K     W         A TV     E I  L  LL   +     +I+  L  
Sbjct: 718 SAVYLDIIKDRLYTWPAASKGRRSAQTV---LYETINVLVRLLTPILAFTTEEIWRYLPG 774

Query: 480 ADE 482
            D+
Sbjct: 775 EDD 777



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N   H+GH    I+ D++ ++H ++G D  +  G D HG  I + 
Sbjct: 45  RGKPKFILHDGPPYANGHLHLGHTLNKILKDIIIKYHSMNGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
           A                    + +  +     R+    L +  D      T E  +    
Sbjct: 105 AIKNLGLNRHAVDVVEFRNRCRDYALKYVNIQREEFKRLGVRGDWEHPYLTLEPEYEAIQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IYKG    ++    E    + EV  G +         PV
Sbjct: 165 IGIFGEMAKKGYIYKGLKPVYWCTDCETALAEAEVEYGEERSPSIYVKFPV 215


>gi|189183152|ref|YP_001936937.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189179923|dbj|BAG39703.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 839

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI     YP+ + H+GH     I DV+ARF R  G +VL   G D  G     AA
Sbjct: 27  NKIKRYILPMFPYPSGKAHVGHVRNYTICDVIARFERSQGHNVLHAMGWDAFGLPAENAA 86

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +V+ N    +     + +SYD    I T   +++   +  + ++  KG +Y
Sbjct: 87  MQNNTHPNSWVNSNVDVMKRQLKAIGLSYDWSREIITCSPQYYVHEQRFFLEMLKKGLVY 146

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            +++   + +F +++ Y D LL   
Sbjct: 147 QKESLVNWDPVDQTVLANEQVINGKG----WRSGAIIEYRNLKQWFIKITNYADALLKGL 202

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +S   +   ++   +       G+ 
Sbjct: 203 DSLQSWPESVKTMQKKWIGQSKGIN 227



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 117/382 (30%), Gaps = 90/382 (23%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q +     P+   +  G           +L  +             +    +VK 
Sbjct: 416 WGISRQRFWGCPIPIIHCKSCGAVPVPYEDLPVILPEHGVEFTGKGNPLDNHPSWKYVKC 475

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPA 258
               L   R+T  +                   + Y        + D   AK    + P 
Sbjct: 476 PKCHLDAVRETDTFDT-------------FFESSWYFARFCNSTSDDMVDAKAAKYWLPV 522

Query: 259 DLHVIGKDILRFHAIYWPAFLLSA-------------------------------NLPLP 287
           D ++ G +    H +Y                                       N   P
Sbjct: 523 DQYIGGIEHAVMHLLYARFITRVMYDLKYIDIQEPFTSLITQGMVLHRTYQDQSNNWVYP 582

Query: 288 KKV------------FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +V             S    + K EK+SKS  NV+D   V++  G D  R F++ +   
Sbjct: 583 NEVEVDSNGKLRCKADSQYVTVGKLEKMSKSKKNVVDLELVLKLYGADVARMFVLSDTPP 642

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            KD  +  +G++          + N       + LK+ +          + D+ +L+   
Sbjct: 643 EKDLEWSTEGIEGCY--KFVQKLYNFA-----LKLKNINLTD------NKIDKVLLNKTH 689

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + ++ + +++ +  +++A+A++  L + + +                  S +     E  
Sbjct: 690 KTIKNVTQDIISCRLNKAIARLRELYNLIFK-----------------MSELTVQIKESF 732

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  L   F+P L+ +I+ +L
Sbjct: 733 LILIRLFNPFIPHLSEEIWSLL 754


>gi|60681847|ref|YP_211991.1| isoleucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253565554|ref|ZP_04843009.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|81315088|sp|Q5LCU8|SYI_BACFN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|60493281|emb|CAH08065.1| isoleucyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251945833|gb|EES86240.1| isoleucyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301163339|emb|CBW22889.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 1141

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 113/326 (34%), Gaps = 13/326 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE Y     +     +       +  +P E   E  + +      +         G  + 
Sbjct: 546 EELYNEIEKSVAAGYMQSNPYKDKGFVPGEYNEENYNKIDLHRPYVDDIILVSKDGKPMK 605

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPA 277
            +   ++ VW D+         Y             +PAD    G D     F  ++  A
Sbjct: 606 READ-LIDVWFDSGAMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIA 664

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   
Sbjct: 665 TMVFDSVSYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEQYGSDPLRWYMITNSSPWD 724

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           +  +D DG+++                ++   +  ++            E D  ILSV +
Sbjct: 725 NLKFDVDGIEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADLPMNERPEIDRWILSVLN 784

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVT 451
            +++E+          +A   +   V++   + Y   + ++ W           +     
Sbjct: 785 TLVKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGGFTQDKLSAYQTL 842

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +  +A L+    P  A++++  L
Sbjct: 843 YTCLETVAKLMAPIAPFYADRLYSDL 868



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 66/447 (14%), Positives = 129/447 (28%), Gaps = 61/447 (13%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV------DQNSRNFRDMADVLDISYDDFIR-------------TT 98
           +    + +   TK  +       + + + R         ++D                T 
Sbjct: 94  VELGVEKSLGITKEDIGKTISVAEYNAHCRQDVMKFTKEWEDLTHKMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +     ++ +       + +      P    +     V   +  +++       G 
Sbjct: 213 QFKMKNPKPEMAQWGTPYFLAWTT-----TPWTLPSNTALCVGPKIDYVAVQSYNAYTGQ 267

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVI--GKDILRFHAI 273
            I         V   AL N        +          K  P  +     G D++     
Sbjct: 268 PITV-------VLAKALLNAHFNPKAAELKLEDYKAGDKLVPFKVIAEYKGPDLVGMEYE 320

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGE---KISKSLG---------NVIDPIEVIEEVG 321
               ++        + +         G     I+ + G           I P++++ + G
Sbjct: 321 QLIPWVNPGEGAF-RVILGDYVTTEDGTGIVHIAPTFGADDAQVAKAAGIPPLQLVNKKG 379

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
              LR  +            D+D +K+RVN DL          +   +   YD  +    
Sbjct: 380 --ELRPMVDLTGKFYTLDELDEDFIKQRVNVDLYKEY------AGRFVKNAYDPNLSDQD 431

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQ 408
              +    ++   +    +I +++ N 
Sbjct: 432 ESLDVSICMMMKVNNQAFKIEKHVHNY 458


>gi|15835099|ref|NP_296858.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285268|ref|ZP_06194662.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289286|ref|ZP_06195588.1| leucyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336664|ref|ZP_07224866.1| leucyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878791|sp|Q9PKI4|SYL_CHLMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|7190521|gb|AAF39327.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 819

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKQQLTSMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++EV  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEVENGFS----VEGGYPVERRMLRQWVLRITAFADQLLG 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 93/302 (30%), Gaps = 87/302 (28%)

Query: 224 PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   Y                K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSCAPWAEEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QVFYEAGIVSTPEPFKKLVNQGLVLSTSYRIPGKGYIAPEMAKEENGQWISPSGELLDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPKVLIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESI---LSVCSRVLQEIRENMQNQLIHRALAQ 416
             ++R   M             +    DE I   +S+  +++Q + ++++   ++   + 
Sbjct: 649 RFLNRFYEMA-----------TSSRVKDEDIFEGMSLAHKLVQRVTDDIEKLSLNTITSS 697

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  ++E  +                    +       +      L    P ++ +++ +
Sbjct: 698 FMEFINEFVK--------------------LPVYPKNAVEMAVRALAPIAPHISEELWVL 737

Query: 477 LF 478
           L 
Sbjct: 738 LG 739


>gi|306828157|ref|ZP_07461420.1| leucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429694|gb|EFM32740.1| leucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 104/316 (32%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLVT--------TKEIVAENSGALDKVYNETVKAVTEQIETMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++ ++ 
Sbjct: 710 IFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQMIT 749

Query: 479 VADENR---CFQSLDQ 491
            +DE+     + + D+
Sbjct: 750 QSDESIAHVAWPTWDE 765


>gi|293364314|ref|ZP_06611040.1| leucine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702720|ref|ZP_07639672.1| leucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317160|gb|EFE57587.1| leucine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623836|gb|EFO02821.1| leucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVT 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|260587872|ref|ZP_05853785.1| leucine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083873|ref|ZP_08332982.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260542137|gb|EEX22706.1| leucine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330403298|gb|EGG82858.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +RF  + G  ++   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRFKMMQGYYLIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  NF+   + +     +D  + TT+   +   + ++ K+  +G  
Sbjct: 89  AIKMGVHPSKSTAENVENFKRQLNDISAIYDWDREVNTTDPEFYKWTQWIFVKMFKEGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y D+LL+ 
Sbjct: 149 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGAEVTKKNLRQWMLRITKYADRLLND 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 205 LDKLDWPEKVKKMQAEWI 222



 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 119/346 (34%), Gaps = 56/346 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+      ++       + + + ++   GI+
Sbjct: 414 FKLRDWVFSRQRYWGEPIPIIHCPNCGNVPVPEDQLPLTLPDVESYEPTGTGESPLAGIE 473

Query: 220 IPDD------------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +                M  W         Y+      +     KA+ + P D+++ 
Sbjct: 474 EWVNTTCPCCGAPAKRETNTMPQWAGSSWYFLRYVDNKNTEELVSKEKAQKYLPVDMYIG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 534 GVEHAVLHLLYSRFYTKFLYDIGVVDFDEPFQKLFNQGMITGKNGIKMSKSKGNVVSPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G DALR + +       D  +D  G+         +G+   ++R   + +     
Sbjct: 594 LVRDYGCDALRLYELFVGPPELDAEWDDRGI---------DGVYRFINRFWKLAMD---- 640

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
              +  A     + ++ +  +++ +I + +++  ++  ++  +      ++  D  K   
Sbjct: 641 ---SKEANVAETKEMVKMRHKLVYDITQRLESFSLNTVISGFMEYN---NKLIDMAK--- 691

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K+   D+A          I     LL  F P ++ +++      D
Sbjct: 692 -KEGGIDKA---------TIEAFVQLLAPFAPHVSEELWQEYGHTD 727


>gi|89898198|ref|YP_515308.1| leucyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722314|sp|Q254X5|SYL_CHLFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89331570|dbj|BAE81163.1| leucyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 820

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 83/224 (37%), Gaps = 7/224 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NFR     +  SYD      T++  ++   + L+  + +KG  
Sbjct: 89  AVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPEYYRWTQKLFLLLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  Y        +++EV  G           PV+      +  R++AY D+LL  
Sbjct: 149 YMADMAVNYCPELGTVLSNEEVENG----LSIEGGYPVERRMLRQWILRITAYSDQLLEG 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            E         + +   I   +  L    ++ + F        D
Sbjct: 205 LEGLDWPENVKQLQRNWIGKSEGALVRFKVNNQNFLEVFTTRPD 248



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 100/316 (31%), Gaps = 89/316 (28%)

Query: 224 PQYIMYVWIDALTNYLTTT---GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL               K K+W P DL++ G +    H +Y   W 
Sbjct: 479 ETHTMPQWAGSCWYYLRFCDALNSQAPWSNEKEKYWMPVDLYIGGAEHAVLHLLYSRFWH 538

Query: 277 AFLLSANL-----PLPKKVF--------------------------------SHGFILHK 299
                A +     P  K +                                 S   +  +
Sbjct: 539 RVFYDAGMVSTPEPFKKLINQGLVLATSYRIPGKGYVYPEDAHEDNGVWMSTSGEELEVR 598

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +IEE G DALR + +      K+  +   G+          G  
Sbjct: 599 QEKMSKSKLNGVDPQILIEEFGADALRMYAMFSGPLDKNKLWCNQGVS---------GCR 649

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   ++       I  P            +  R++  + E+++   ++   +  + 
Sbjct: 650 RFLNRFYELVTSSLVQDIDDPKGM--------YLAHRLVHRVGEDIEKMSLNTIPSSFME 701

Query: 420 LVSE---VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            ++E   +D Y             P  A          +  +   L    P ++ +++ I
Sbjct: 702 FINEFVKLDIY-------------PKSA----------LAMVVRALAPIAPHISEELWTI 738

Query: 477 LFVAD--ENRCFQSLD 490
           L  A   +   +  +D
Sbjct: 739 LGNAPGIDQAGWPEVD 754


>gi|325522725|gb|EGD01223.1| valyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 955

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 131/409 (32%), Gaps = 61/409 (14%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +      D  ++    + + +     + Q   V       Y+  L   QD  +S  
Sbjct: 362 QWFVAMTKPAPDGTFHPGKSITEVSLDVVRDGQIKFVPENWTTTYYQWLENIQDWCISRQ 421

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                 I      N  +   +S     + +      G  +  D   ++  W  +     +
Sbjct: 422 LWWGHQIPAWYGENGEVFVARSEEDARAKAAAQGYTG-ALKRDED-VLDTWFSSALVPFS 479

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
             G+ +        F P+ + V G DI+ F    +       +  +P             
Sbjct: 480 ALGWPNETP-ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDA 538

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
           +G+K+SKS GN +DPI++                                     I   G
Sbjct: 539 EGQKMSKSKGNTLDPIDIVDGIDLETLVAKRTTGLMNPKQAATIEKKTRKEFPDGIPAFG 598

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ +      G++  +D    +     +  N + N  +R V M  + +D  +  P 
Sbjct: 599 TDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGLDKPE 655

Query: 382 A-------------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
           A             F+ +D  I+S+  R   +I +   +       + +   V +   D 
Sbjct: 656 ACGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIASSIYKFVWDEYCDW 715

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K  +++   P++        + V+  +  L    +P +   ++ 
Sbjct: 716 YLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIPFITEALWQ 763



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 36  GRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVV 95

Query: 63  QNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +     T         + FV++                R +    D S + F  T + + 
Sbjct: 96  ERQLDATGVSRHDLGREKFVERVWEWKQQSGSTITGQVRRLGASTDWSREYF--TMDDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SAAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|312891714|ref|ZP_07751223.1| valyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295797|gb|EFQ72957.1| valyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 918

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 127/373 (34%), Gaps = 25/373 (6%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE---EGYFFRLSAYQDKLL 177
           K     +  + D A    D V KG      +   N  +   E   +    R   +  ++ 
Sbjct: 374 KLSMQWFCKMEDMAKPALDYVLKGDIKLIPDKFTNTYRHWMENVKDWCISRQLWWGQRIP 433

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLS---------LSRKTFDWGIKIPDDPQYIM 228
            +Y  H  + L    R E+    +      +          +  T    +K     + ++
Sbjct: 434 VWYGPHTPWDLEGSERFEIAKTKEEADALFTNYYKSLEGDFTEHTIGLALKRIHQDEDVL 493

Query: 229 YVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
             W  +    ++      +P+  +   ++P +  V   +IL F    +          +P
Sbjct: 494 DTWFSSWLWPISVFDGFKDPNNEEINYYYPTNDLVTAPEILFFWVARMIMAGHEFRGEIP 553

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                 +       G K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+  
Sbjct: 554 FKNVYLTGIVRDKLGRKMSKSLGNSPDPLHLIEKYGADGVRVGMLLSSPAGNDLMFDEGH 613

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
            ++    + AN I N        ++K ++           + +      ++ L EI ++ 
Sbjct: 614 CEQ--GRNFANKIWN-----AFKLVKGWEIDDSLVNTNQVAIQWFSDRFNQALSEIEDHF 666

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLAILL 462
           +   +  AL     LV +     Y +  KP   +              TV     +  +L
Sbjct: 667 KQYRLSDALMTTYKLVWDDFCAWYLEMIKPAYQQGVEKQAIDRETYTATVSYFENILKIL 726

Query: 463 QAFVPKLANKIFD 475
             F P +  +++ 
Sbjct: 727 HPFTPFITEELWH 739



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 54/180 (30%), Gaps = 19/180 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 44  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARMKGKNACWVPGTDHASIATEAKV 103

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        + ++      +    L  S D      T +    +
Sbjct: 104 VAMLKERGITKKDLSREEFLTYAWEWKEKYGGIILEQLKKLGASCDWERTRFTMDPDLSE 163

Query: 105 TCRILWKKISDKGDIYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                +  +  K  IY+      W      A  +++ + K  + + Y  ++  V+   E+
Sbjct: 164 AVIDTFIHLYKKDLIYRGIRMVNWDPQGKTAVSDEEVIRKEVNQKLYYIKYKIVEPYLEK 223


>gi|149011125|ref|ZP_01832430.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764761|gb|EDK71691.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
             DE+  + +    
Sbjct: 750 ETDESISYVAWPTW 763


>gi|149006009|ref|ZP_01829738.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762365|gb|EDK69326.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332076703|gb|EGI87165.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++    +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|225869700|ref|YP_002745647.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782514|sp|C0M8N3|SYL_STRE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225699104|emb|CAW92273.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLAD 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++         K W P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEQLADKDLLKQWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVDKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+         G 
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLE---------GA 657

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++       ++ + E ++    + A+AQ++
Sbjct: 658 RKFLDRVYRLIT--------TKEIVAENSGALDKAYHETVKAVTEQIEGMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D             +    LL  F P L  +++ IL 
Sbjct: 710 IFVNAANK--------------EDELYVAYA------KGFVQLLAPFAPHLGEELWQILT 749

Query: 479 VADENRCFQSLDQ 491
            + ++  + +   
Sbjct: 750 ASGQSISYVAWPT 762


>gi|168492209|ref|ZP_02716352.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183573589|gb|EDT94117.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 101/318 (31%), Gaps = 90/318 (28%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDTSIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDR----YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             V+  ++    Y D  K                            ++  F P LA +++
Sbjct: 710 VFVNAANKEEKLYVDYAK------------------------GFIQMIAPFAPHLAEELW 745

Query: 475 DILFVADENRCFQSLDQR 492
             +    ++  + +    
Sbjct: 746 QTVAATGDSISYVAWPTW 763


>gi|157164836|ref|YP_001467047.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|189082987|sp|A7ZE39|SYL_CAMC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112800438|gb|EAT97782.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 821

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ + H+GH     I D LAR +R  G +VL   G D  G     AA  
Sbjct: 35  PKKYILSMFPYPSGRIHMGHVRNYSIGDALARSYRKSGYNVLHPIGFDSFGMPAENAAIK 94

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K++  +N    +     L  S+     + T++  +    +  + K+ +KG +Y+ 
Sbjct: 95  HKIHPKIWTYENIDYMKKELASLGFSFSKKRILATSDPLYTKWEQSFFIKMFEKGLVYRK 154

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G          N V   E  GY+F ++ Y  +LL   + 
Sbjct: 155 NAIVNWCEYDQTVLANEQVEDGK----CWRCGNDVVQKELPGYYFNITKYASELLDDLKL 210

Query: 183 HP-EFILPIERRNEVISFVKSGL 204
              ++   +    E       GL
Sbjct: 211 LEGKWPNQVITMQENWIGRSYGL 233



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 109/349 (31%), Gaps = 49/349 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY--YESHPEFILPIERRNEVISFV 200
            G   Q Y     PV   +  G            L      +     L      +     
Sbjct: 430 WGISRQRYWGAPIPVVHCKCCGVVPEKEENLPIALPEDVEITGEGNPLDKHPTWKFTKCP 489

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PAD 259
           K G   +  +               ++   W  A       T      D     +W   D
Sbjct: 490 KCGKDAIRETDTM----------DTFVESSWYFARFASDEKTWEQKALDEKSVNYWMNVD 539

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            ++ G +    H +Y   F         L  + P  + + + G +L  G+K+SKS GNV+
Sbjct: 540 QYIGGIEHAILHLLYARFFQKVLRDLGYLRDDEPF-ENLLTQGMVLKDGKKMSKSKGNVV 598

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP ++I   G D  R F++      K+  ++   ++        N +        S  +K
Sbjct: 599 DPDDIINRYGADTARLFILFAAPPQKELEWNDSAVEGAFR--FLNRLWEK-----SQTIK 651

Query: 372 DYDGMIPTPGAFTESDESILS-VCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFD 429
             D +          DE          L++  E        +  +A  +  ++ ++    
Sbjct: 652 KIDKLPEIDHESLNKDEKFARLKIYEALKKSTEVFGDTFAFNTLIAACMEALNAIN---- 707

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   + N D       V  E    +  LL+  VP +AN++ + LF
Sbjct: 708 -------AQDNDD-------VNAEGFFIILNLLEPIVPHIANELSEELF 742


>gi|53713564|ref|YP_099556.1| isoleucyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81825004|sp|Q64U07|SYI_BACFR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52216429|dbj|BAD49022.1| isoleucyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 1141

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 113/326 (34%), Gaps = 13/326 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE Y     +     +       +  +P E   E  + +      +         G  + 
Sbjct: 546 EELYNEIEKSVAAGYMQSNPYKDKGFVPGEYNEENYNKIDLHRPYVDDIILVSKDGKPMK 605

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPA 277
            +   ++ VW D+         Y             +PAD    G D     F  ++  A
Sbjct: 606 READ-LIDVWFDSGAMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIA 664

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   
Sbjct: 665 TMVFDSVSYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEQYGSDPLRWYMITNSSPWD 724

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           +  +D DG+++                ++   +  ++            E D  ILSV +
Sbjct: 725 NLKFDVDGIEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADLPMNERPEIDRWILSVLN 784

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVT 451
            +++E+          +A   +   V++   + Y   + ++ W           +     
Sbjct: 785 TLVKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGGFTQDKLSAYQTL 842

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +  +A L+    P  A++++  L
Sbjct: 843 YTCLETVAKLMAPIAPFYADRLYSDL 868



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 66/447 (14%), Positives = 129/447 (28%), Gaps = 61/447 (13%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV------DQNSRNFRDMADVLDISYDDFIR-------------TT 98
           +    + +   TK  +       + + + R         ++D                T 
Sbjct: 94  VELGVEKSLGITKEDIGKTISVAEYNAHCRQDVMKFTKEWEDLTHKMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +     ++ +       + +      P    +     V   +  +++       G 
Sbjct: 213 QFKMKNPKPEMAQWGTPYFLAWTT-----TPWTLPSNTALCVGPKIDYVAVQSYNAYTGQ 267

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---AKFWPADLHVI--GKDILRFHAI 273
            I         V   AL N        +          K  P  +     G D++     
Sbjct: 268 PITV-------VLAKALLNAHFNPKAAELKLEDYKAGDKLVPFKVIAEYKGPDLVGMEYE 320

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGE---KISKSLG---------NVIDPIEVIEEVG 321
               ++        + +         G     I+ + G           I P++++ + G
Sbjct: 321 QLIPWVNPGEGAF-RVILGDYVTTEDGTGIVHIAPTFGADDAQVAKAAGIPPLQLVNKKG 379

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
              LR  +            D+D +K+RVN DL          +   +   YD  +    
Sbjct: 380 --ELRPMVDLTGKFYTLDELDEDFIKQRVNIDLYKEY------AGRFVKNAYDPNLSDQD 431

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQ 408
              +    ++   +    +I +++ N 
Sbjct: 432 ESLDVSICMMMKVNNQAFKIEKHVHNY 458


>gi|23099762|ref|NP_693228.1| leucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|32171556|sp|Q8EP12|SYL_OCEIH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22777992|dbj|BAC14263.1| leucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +EK Y      YP+ Q  H+GH       D+LAR  R+ G +V+   G D  G    +
Sbjct: 28  SNKEKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGYEVMHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F +QN   F+     L  SY  D  I TT+  ++   + ++KK+ +   
Sbjct: 88  YAIDTGNSPAEFTNQNINTFKRQIKELGFSYDWDREINTTDPNYYKWTQWIFKKLYENDL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV     + +  +++AY D+LL 
Sbjct: 148 AYMDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVIRKPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
                       E +   I   +
Sbjct: 204 DLNELDWPDSLKEMQRNWIGRSE 226



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 89/237 (37%), Gaps = 39/237 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            ++ P D+++ G +    H +Y   +         +S   P  K       +    EK+S
Sbjct: 519 EEWLPIDIYIGGAEHAVLHLLYARFWHKFLFDIGVVSTKEPFQKLYNQGMILGEGNEKMS 578

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P ++I+  G D LR + +          +  +GL         +G    + R
Sbjct: 579 KSKGNVVNPDDIIDSHGADTLRLYEMFMGPLDASVAWSTNGL---------DGSRRFLDR 629

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              + +   D    T     +    +  +    ++++ ++ ++   +  ++Q++  ++E 
Sbjct: 630 VWRLYVG--DDGSLTDKIIDDESTELDKIYHETVKKVTDDFEHMHFNTGISQMMVFINEC 687

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +                 A+ +  +  E       LL    P L+ +I+  L  ++
Sbjct: 688 YK-----------------ANKIPKIYAEGF---VKLLSPVAPHLSEEIWQKLGHSE 724


>gi|306821338|ref|ZP_07454947.1| leucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550625|gb|EFM38607.1| leucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 807

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +++K Y      YP+ Q  H+GH       D++AR  RL+G +VL+  G D  G     
Sbjct: 33  SDKQKFYPLVEFPYPSGQGLHVGHPRSYTALDIIARKKRLEGYNVLYPIGWDAFGLPTEN 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  K     N  NF+     L +S+D    I TT+  ++   + ++ K+ + G 
Sbjct: 93  YAIKHKIHPKKVTQDNIANFKRQLKSLGLSFDWSREINTTDPSYYKWTQWIFLKLFEHGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G         H+ V   E+  +  +++ Y +KLL 
Sbjct: 153 AYKKKMPINWCPSCKVGLANEEVINGQ----CERCHSQVVRKEKSQWMLKITDYAEKLLD 208

Query: 179 YYESHPEFILPIERRNEVI 197
             +          +++  I
Sbjct: 209 DLDLVDFIERVKTQQSNWI 227



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 108/347 (31%), Gaps = 52/347 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+   E  GY     +     L   +S      P +     +S + S
Sbjct: 424 WVFSRQRYWGEPIPIVHCEHCGYVPLPESELPLTLPEVDS----YEPTDNGESPLSKLTS 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
            +  +                       +     +      +              D + 
Sbjct: 480 WINTVCPKCGAPATRETDTMPQWAGSSWYFLRYIDPHNDKEFASKKAQEYWMN--VDWYN 537

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   +         ++   P  ++      +   G+K+SKSLGNV++P 
Sbjct: 538 GGMEHTTLHLLYSRFWHKFLYDIGEVTTKEPYARRTSHGMILGENGQKMSKSLGNVVNPD 597

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+++  G D  R + +      K   +    +K              V R  +M      
Sbjct: 598 EIVDTYGADTFRTYEMFIGDFEKKAPWSSQSIKGS---------FRFVERLWNM------ 642

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                      S E I    ++ ++++ E+ +N   + A+A +++ ++EV          
Sbjct: 643 ---QELVTDESSSEKIRKSLNKTIKKVSEDYENLKANTAIAAMMAFLNEVY--------- 690

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                +  R S   Y+T      L IL     P +  + + I+   +
Sbjct: 691 -----DEKRISKQDYLT------LLILANPVAPHVTEEAWQIVNADN 726


>gi|294655823|ref|XP_458016.2| DEHA2C07722p [Debaryomyces hansenii CBS767]
 gi|199430633|emb|CAG86076.2| DEHA2C07722p [Debaryomyces hansenii]
          Length = 1084

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 116/354 (32%), Gaps = 44/354 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    +        N+     +S  + L  ++K F       +  
Sbjct: 547 WCISRQLWWGHRCPVYFVTFDGAENDRLNNDYWIAGRSYEEALEKAQKKFPNQTFTLEQD 606

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +  +     + P  +   G DIL F    +      L+ 
Sbjct: 607 EDVLDTWFSSGLWPFSTLGWPNKTN-DMELYNPMSMLETGWDILFFWVSRMILLGLKLTG 665

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
            +P  K+VF H  +   +G K+SKSLGNVIDP++VI  + +  L   L       K+   
Sbjct: 666 KVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVIAGIPLQGLHDKLKTGNLDPKELQK 724

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I       +
Sbjct: 725 ATDGQKASYPNGIPECGTDALRFALCAYSTGGRDINLDILRVEGYRKFCNKIYQATKFVL 784

Query: 367 SMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE 423
             + +DY         G  +  ++ IL   +   + +  +++ +    +   + +     
Sbjct: 785 GKLGEDYKPPATSAKSGNESLVEKWILHKLTTTAKNLSASLEKRDFFESTNAIYNFWYDL 844

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K      T P++  +        I     ++  F+P +  +++  L
Sbjct: 845 CDVYIENSKSLIQDGT-PEQKKSAQDTLYSCIDSALRMIHPFMPFVTEEMWQRL 897



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G   LF  G D  G       +   
Sbjct: 165 FTIPAPPPNVTGALHIGHALTIAIQDTLIRYYRMKGKTTLFLPGFDHAGIATQSVVEKQI 224

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T      ++  
Sbjct: 225 WANEKKTRHDYGREKFIEKVWEWKEEYHGRIKNQVKKLGASYDWSREAFTLNPDLSESVT 284

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ + G IY+      +S++
Sbjct: 285 EAFVRLHEDGTIYRASRLVNWSVK 308


>gi|167582160|ref|ZP_02375034.1| valyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 955

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 129/409 (31%), Gaps = 61/409 (14%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +      +  ++    + + +       Q   V       Y+  L   QD  +S  
Sbjct: 362 QWFVAMTKPAPEGTFHPGKSITEVSLDVVRRGQIKFVPENWTTTYYQWLENIQDWCISRQ 421

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                 I      N  I   +S     + +      G    DD   ++  W  +     +
Sbjct: 422 LWWGHQIPAWYGENGEIFVARSEEDARAQAAAKGYAGALRRDDD--VLDTWFSSALVPFS 479

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+ +        F P+ + V G DI+ F    +       +  +P             
Sbjct: 480 SLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFETVYVHGLVRDA 538

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
           +G+K+SKS GN +DPI++                                     I   G
Sbjct: 539 EGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQAASIEKKTRKEFPDGIPAFG 598

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ +      G++  +D    +     +  N + N  +R V M  + +D     P 
Sbjct: 599 TDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGFDKPE 655

Query: 382 -------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                         F+ +D  I+S+  RV  +I +   +         +   V +   D 
Sbjct: 656 VCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYRFDNIANAIYKFVWDEYCDW 715

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K  +++   P++        + V+  +  L    +P +   ++ 
Sbjct: 716 YLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKEQSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|315612362|ref|ZP_07887275.1| leucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315343|gb|EFU63382.1| leucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILGRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 105/316 (33%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIAAENNGALDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENR---CFQSLDQ 491
              E+     + + D+
Sbjct: 750 ATGESISYVTWPTWDE 765


>gi|238809718|dbj|BAH69508.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 843

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 138/353 (39%), Gaps = 45/353 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + PV+ +    +F ++      +L + +S        +R   VI      + D +
Sbjct: 353 YSERSNTPVETLVMPQWFVKMDKLAQDILDHLKSKDAVNFYPKRFVNVIKKWMENIHDWT 412

Query: 209 LSRKTFDWGIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           +SR+   WG +I                       + ++  W  +     +  G+     
Sbjct: 413 ISRQ-LWWGHRIPAWYKDDKVKVQIESPGEGWVQDEDVLDTWFSSGIAPFSFLGWPKKTT 471

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
             K +++P  L V G DI+ F    +Y+         P  + +         G+K+SKS 
Sbjct: 472 LLK-RYYPTSLLVTGYDIIFFWVARMYFFGLEFMKQKPFDRVLIHGLVRDQFGKKMSKSS 530

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N +DPI+VI E G DALR+F++   + G D  Y K+ +       L N + N+  R + 
Sbjct: 531 NNGVDPIQVINENGSDALRWFMITNTSPGLDIRYSKEKITSAWG--LCNKLWNIA-RYIQ 587

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
           ++ +D           T +D  I +    + + I + MQN        ++   +      
Sbjct: 588 LLPED------KENKKTAADIWIHNKLVALKKRIDKAMQNYEFTIVGTELSKFIYNDFSS 641

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            Y +      L K  P++ + +       ++ L ++   F+P + + ++ +LF
Sbjct: 642 WYVE------LLKIMPNKKAALDN-----LKSLLLIAHPFLPFITDHLYKVLF 683



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 19/140 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   I         + HIGHA +  I D + R+ +L G DV +  G D  G       
Sbjct: 43  SKKPFTILLPPPNVTGKLHIGHALDTYIQDTIIRYKKLSGYDVFYVAGMDHAGIATQSKV 102

Query: 63  QNAGVT-----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +N                        + ++ +  FR     L   + Y+    T + + +
Sbjct: 103 ENTIYQKEGLNRHDLGREKFLKRVWEWKEEYAELFRKQWASLGLALDYERERFTLDVKSN 162

Query: 104 DTCRILWKKISDKGDIYKGC 123
           +     +  +  KG IY G 
Sbjct: 163 EAVLKAFITLYKKGLIYHGT 182


>gi|254168772|ref|ZP_04875613.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622209|gb|EDY34783.1| valyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 858

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/469 (16%), Positives = 152/469 (32%), Gaps = 38/469 (8%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
             + F  G ++ G+    A + AG+  +        + ++M        D  I+  +   
Sbjct: 279 YHLKFLEGINDKGEMTELAGKYAGMPVEEARKAIIEDLKNM--------DLLIK--QDEI 328

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                + W+  +    I K  +        +      E             ++ V  +E 
Sbjct: 329 EQNVGVCWRCHTPIELINKEQWFIKIKDLKDEVKKTAEEINWHPEWMKKRLYDWVDSLEW 388

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           +    R   +   +  +   +    +P     + +        D     K    G  +  
Sbjct: 389 DWVVSRQRYFATPIPIWECENGHTFVPKFEELQKMDRHVDPTIDPPPYEKCPICGAPLHG 448

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
               +   W+D+  + L  T +  + +    K +P  L     DI+R  A Y       +
Sbjct: 449 TED-VFDTWVDSSISPLYNTFWARDDE-KFEKLYPMSLRPQSHDIIRTWAFYTILRCKSV 506

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P          +   G  +  S GNV+DP+E+I+E G DALR+F   +   G+D  
Sbjct: 507 TGEKPWKDIAIDGFILAPDGRPMHTSWGNVVDPLEIIDEYGADALRFF-AAKCTPGEDTP 565

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +      +     +   + NL     S I                 D+ I+S  S V+ E
Sbjct: 566 FRYKDTIR--GRKVIIKLYNLGKFVGSAIKD--GIKEVPVEKLNFMDKWIISKYSEVVDE 621

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             + M      +A+  V + +     D Y +  K    +++         Y    V   +
Sbjct: 622 ATKYMDEYRYDKAVKLVENFMWNVFADHYVEMVKHRLNEES-------TKYTLYNVFLGI 674

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             +    +P +  +I+      +  R F+      +    +    +PIF
Sbjct: 675 VKMFAPIMPHITEEIYQ-----EHYRKFEG-----EKSVHITSWPEPIF 713



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 15/172 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I     Y + + HIGHA      D +AR+ R+ G +V +    D +G  I   
Sbjct: 27  SDKPIFSIDVPPRYASGKLHIGHATHYTHIDFIARYKRMRGYNVFYPLCFDVNGMPIEVN 86

Query: 62  AQNA-----GVTT--------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +         T         + F + N         +L  + D   + +T    +    
Sbjct: 87  VEKKYGIKMRETPRQEFIKLCEDFANANIGEMIRQFKILGEAMDPTIYYQTDAPYYRRIT 146

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           ++ + K+ +KG +YK  +   +  R      D E+         N     V+
Sbjct: 147 QLSFIKMFEKGLVYKAKHPVNWCPRCGTAIADAEIEYQKRKTKLNYIPFKVE 198


>gi|148234431|ref|NP_001084397.1| isoleucyl-tRNA synthetase [Xenopus laevis]
 gi|40352733|gb|AAH64686.1| MGC68929 protein [Xenopus laevis]
          Length = 1259

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/468 (13%), Positives = 148/468 (31%), Gaps = 40/468 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D  G    +    AG   K       +  ++   ++  S     Y    R+     
Sbjct: 349 VCPVDASGCFTKEVTDFAGQYVKDADKNIIKLLKEQGRLVHSSSYKHNYPFCWRSDTPLI 408

Query: 103 HDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + ++    D        CY     +R++ + N  +  +            P+ 
Sbjct: 409 YKAVPSWFVRVEHMVDKLLQNNSQCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIP 468

Query: 159 WMEEEGYF---FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
               E +       S  + + L+  +        ++         K  LK ++       
Sbjct: 469 LWVSEDFEEVVCVGSLAELEELTGIKVTDLHRESVDHLTIPSRRGKGALKRVTE------ 522

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      +   W ++ +       Y           +PAD    G D     F+ +
Sbjct: 523 -----------VFDCWFESGSMPYAQVHYPFENRREFEDCFPADFIAEGIDQTRGWFYTL 571

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  L    P    + +   +   G+K+SKS  N  DP++VI   G DALR +L+   
Sbjct: 572 LVLSSALFGQPPFKNVIVNGLVLASDGQKMSKSKKNYPDPMQVINVYGSDALRLYLINSP 631

Query: 334 ACG-KDGFYDKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAFTE----- 385
               ++  + ++G++  +             + +++  + K+ D       +  +     
Sbjct: 632 VVRAENLRFKEEGVRDVLKDVFLPWYNAYRFLMQNIYRLHKEEDIHFLFNESIKQQSSNI 691

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRA 444
            D+ I+S    + Q  +  M    ++  + +++  V    + Y    +     ++  +  
Sbjct: 692 MDKWIISFTQSLGQFFKAEMSAYRLYTVVPRLVKFVDMLTNWYVRMNRRRLKGESGTEDC 751

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
              L     V+  +  L+  F P +   ++  L +  +    Q  D +
Sbjct: 752 QMALETLFSVLFSMCRLMAPFTPFITEMMYQKLRLLIDPTSMQDKDTK 799



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 36  KSRPRYTFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVERRFGWDCHGLPVEYE 95

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---------TTEKRH 102
                        A +    +  Q        +   +IS     R         T     
Sbjct: 96  IDKTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSQEWEISVTRLGRWIDFKNDYKTLYPWF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 METVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|83721247|ref|YP_443148.1| valyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167620317|ref|ZP_02388948.1| valyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257139378|ref|ZP_05587640.1| valyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83655072|gb|ABC39135.1| valyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 955

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 129/409 (31%), Gaps = 61/409 (14%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +      +  ++    + + +       Q   V       Y+  L   QD  +S  
Sbjct: 362 QWFVAMTKPAPEGTFHPGKSITEVSLDVVRRGQIKFVPENWTTTYYQWLENIQDWCISRQ 421

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                 I      N  I   +S     + +      G    DD   ++  W  +     +
Sbjct: 422 LWWGHQIPAWYGENGEIFVARSEEDARAQAAAKGYAGALRRDDD--VLDTWFSSALVPFS 479

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+ +        F P+ + V G DI+ F    +       +  +P             
Sbjct: 480 SLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFETVYVHGLVRDA 538

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
           +G+K+SKS GN +DPI++                                     I   G
Sbjct: 539 EGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQAASIEKKTRKEFPDGIPAFG 598

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ +      G++  +D    +     +  N + N  +R V M  + +D     P 
Sbjct: 599 TDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGFDKPE 655

Query: 382 -------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                         F+ +D  I+S+  RV  +I +   +         +   V +   D 
Sbjct: 656 VCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYRFDNIANAIYKFVWDEYCDW 715

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K  +++   P++        + V+  +  L    +P +   ++ 
Sbjct: 716 YLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKEQSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|293364008|ref|ZP_06610744.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552498|gb|EFF41272.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 781

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+ Q H+GH    +I D +ARF+R  G +VL   G D  G     AA  
Sbjct: 33  PKKYILSMFPYPSGQVHMGHVRNYVIGDAIARFYRRRGYNVLHPFGWDAFGLPAENAAIK 92

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                K +  +N +   ++   L IS+  D    T +  +    + L+ K+  KG +Y+ 
Sbjct: 93  NNFHPKDWTYKNIQTMNEVIKQLGISFAWDLECITADDDYAKWEQHLFLKLWHKGLVYRK 152

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V             + V   E + Y+ +++ Y ++LL   + 
Sbjct: 153 KTELNFCETDQTVLANEQVINET----CWRCDSKVVKKEMDQYYLKITDYAEELLKDLDL 208

Query: 183 HP-EFILPIERRNEVISFVKSGLK 205
               +   +          K G+ 
Sbjct: 209 LEGHWPSQVITMQRNWIGKKIGIN 232



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 99/339 (29%), Gaps = 36/339 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   +  G       Y   LL    S      P+E   E I     
Sbjct: 383 WGISRQRYWGNAIPLVKCKTCGIVPLKEKYLPILLPRKVSFTGSGNPLETNPEWIKTTCP 442

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                    +          D  +    +    T                  +   D ++
Sbjct: 443 N-------CQADAKRETDTLDTFFESSWYFLRYTTPKDKRLDHMLVPEYINYWSSVDEYI 495

Query: 263 IGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            G +    H +Y   F    N             + + G +L  G K+SKS GNV+ P +
Sbjct: 496 GGIEHAILHLLYARFFTKVLNDIDLVPFREPFNNLLTQGMVLKDGAKMSKSKGNVVIPTD 555

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I+  G D  R F++      K+  +   G+               +      + K+   
Sbjct: 556 MIDAYGADVTRLFILFAAPPVKELEWSDSGILG------CFKFVKRLWTLSQKVSKNDYI 609

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY-FDAQKPW 434
                 + T   +       + L +  E  +N+                + Y F+    W
Sbjct: 610 KNIDTSSLTLEQKDARRKLYQGLNKSLEIFENRK---------------NEYSFNTIISW 654

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            ++  N   A     +  E +     +L+ ++P L+ ++
Sbjct: 655 CMETINAYDAIENKNLLAEYLYVTLNILEPYMPHLSWEL 693


>gi|307704110|ref|ZP_07641038.1| leucyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622332|gb|EFO01341.1| leucyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 105/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ S+  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGSLDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|326577633|gb|EGE27510.1| valyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 975

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 127/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPNGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+        G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLAGTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASEQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++ D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVRLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|239637919|ref|ZP_04678880.1| leucyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596482|gb|EEQ79018.1| leucyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTQKNIQTFKRQIQELGFSYDWDREVNTTDPNYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDA 234
            E         + +   I   +              + IK  D+   +     D 
Sbjct: 205 LEELDWPESIKDMQRNWIGRSEG---------ARVSFNIKDYDEKVEVFTTRPDT 250



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 42/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNDKMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVNSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL         +G    + R   +I+K  +    +      +++S+    
Sbjct: 609 LDAAIAWSDKGL---------DGSRRFLDRVWRLIVK--EDGSLSDKIVDSNNKSLDKTY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  +++  +  +  KP+                    
Sbjct: 658 NQTVKKVTEDFDTLGFNTAISQLMVFINDCYKADEIYKPY-------------------- 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           I     +L    P +  ++++ L  +D
Sbjct: 698 IEGFVTMLAPIAPHIGEELWERLGHSD 724


>gi|170732769|ref|YP_001764716.1| valyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254245639|ref|ZP_04938960.1| Valyl-tRNA synthetase, class Ia [Burkholderia cenocepacia PC184]
 gi|124870415|gb|EAY62131.1| Valyl-tRNA synthetase, class Ia [Burkholderia cenocepacia PC184]
 gi|169816011|gb|ACA90594.1| valyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 955

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 131/409 (32%), Gaps = 61/409 (14%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +      +  ++    + + +     + Q   V       Y+  L   QD  +S  
Sbjct: 362 QWFVAMTKPAPEGTFHPGKSITEVSLDVVRDGQIKFVPENWTTTYYQWLENIQDWCISRQ 421

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                 I      N  +   ++     + +      G  +  D   ++  W  +     +
Sbjct: 422 LWWGHQIPAWYGENGEVFVARNEEDARAQAAAKGYAG-ALKRDED-VLDTWFSSALVPFS 479

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+ +     K  F P+ + V G DI+ F    +       +  +P             
Sbjct: 480 SLGWPNETPELK-HFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYMHGLVRDA 538

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
           +G+K+SKS GN +DPI++                                     I   G
Sbjct: 539 EGQKMSKSKGNTLDPIDIVDGIDLESLVAKRTTGLMNPKQAATIEKKTRKEFPDGIPAFG 598

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ +      G++  +D    +     +  N + N  +R V M  + +D     P 
Sbjct: 599 TDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGNDKPE 655

Query: 382 -------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
                         F+ +D  I+S+  R   +I +   +       + +   V +   D 
Sbjct: 656 VCGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIASSIYKFVWDEYCDW 715

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  K  +++   P++        + V+  +  L    +P +   ++ 
Sbjct: 716 YLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIPFITEALWQ 763



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 18/172 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
                                   +  ++     D    L  S D      T + +    
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQKSGSTITDQVRRLGASTDWSREYFTMDDKMSAA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 157 VRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|322386609|ref|ZP_08060234.1| leucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269282|gb|EFX52217.1| leucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 835

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 32  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 92  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 152 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 208

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 209 LDELDWPESIKDMQRNWI 226



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 100/313 (31%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 489 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 548

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 549 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 608

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 609 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGS--------- 659

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +        + +     +++ ++  V    ++ + E ++    +  +AQ++
Sbjct: 660 RKFLDRVYRL--------MTSKEIVADNNGALDMVYHETVKAVTEQIEELKFNTTIAQLM 711

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 712 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 751

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 752 QTGQSISYVAWPT 764


>gi|167836887|ref|ZP_02463770.1| valyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 955

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 121/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   +S     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARSEEDARAQAAAKGYAGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ D     K  F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPDETPELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFETVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+++D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPEVCGAGDCGPGGHLDFSQADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGAPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   R 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKEQSGSTITGQVRRIGASPDWSREYF--TMNDRM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEVVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|299752085|ref|XP_001830692.2| isoleucine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|298409671|gb|EAU91061.2| isoleucine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 1078

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 100/263 (38%), Gaps = 10/263 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y         K +PAD    G D     F+ +   +  L  
Sbjct: 527 EEVFDCWFESGSMPYAQLHYPFENKELFEKTFPADFVSEGIDQTRGWFYTLLVLSTHLFG 586

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
             P    + +   +   G+K+SKSL N  DP  +I++ G DA R FLV       D   +
Sbjct: 587 RAPWKNLIVTGLVLAADGKKMSKSLKNYPDPNLIIDKYGADATRMFLVNSPIVRGDNLRF 646

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMIL------KDYDGMIPTPGAFTESDESILSVCS 395
            ++G++  ++  L   + +         L      +D+      P      D  +L+ C 
Sbjct: 647 REEGVRDVISRVLLPWLNSFRFFLGHAALYKKAFKEDFVYNAHAPLPNNVMDRWVLARCQ 706

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++ + + M    ++  + +++ L+ E+ + Y    +     +   +     L    E 
Sbjct: 707 SLIKLVTQEMAAYRLYTIIPRLLELIDELTNWYIRFNRKRLKGEDGKEDTYAALNTLFET 766

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  L   + ++ P L   ++  L
Sbjct: 767 LFTLCRTMSSYTPFLTENLYQTL 789



 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +        +    PH GH     I D++ R   + G  V    G D HG  +   
Sbjct: 39  EGRPEYSFYDGPPFATGLPHYGHLLAGTIKDIVTRHAHVSGYHVTRRFGWDTHGLPVEHE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  +R   + +   I +D+  +T     
Sbjct: 99  IDKRLGITGKEDVMKMGIDKYNAECRSIVMRYSSEWRRTVERMGRWIDFDNDYKTLNLSF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++    + ++  KG +Y+G     YS       ++ E
Sbjct: 159 MESVWWAFSELHKKGMVYRGLRVMPYSTGCTTPLSNFE 196


>gi|283770836|ref|ZP_06343728.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460983|gb|EFC08073.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGSHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|239828095|ref|YP_002950719.1| leucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511545|sp|C5D6D7|SYL_GEOSW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|239808388|gb|ACS25453.1| leucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N   FR     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTEKNINTFRRQIKSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV     + +  R++AY D+LL  
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVIRKPMKQWLLRITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 205 LEELDWPESVKEMQRNWIGRSE 226



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 142/412 (34%), Gaps = 61/412 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +      K++   GDI K  Y+G     +  + N    ++ + K  +    
Sbjct: 341 HDERDYEFAKKFNLPIKEVVAGGDIAKEAYTGDGEHINSDFLNGLNKEEAIKKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N +           + F    Y  + +         + P+      +   K+     + +
Sbjct: 401 NGKGQKKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVPEEELPLKLPKTDKIKPTGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKF 255
            ++    I+   +                M  W  +   YL      ++       K K 
Sbjct: 461 GESPLANIEEWVNVVDPKTGKKGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLKK 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P ++IE  G D LR + +          +   GL         +G    + R  
Sbjct: 581 RGNVVNPDDIIESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + +   + P      E+D ++  V  + ++++ E+ +    + A++Q++  ++E  +
Sbjct: 632 RLFVDENGNLNPKIVDNPETD-TLERVYHQTVKKVTEDYEALRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 P  L K              E +     LL    P +  ++++ L 
Sbjct: 691 -----AP-VLPK--------------EYMEGFVKLLSPVCPHIGEELWEKLG 722


>gi|50307489|ref|XP_453724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642858|emb|CAH00820.1| KLLA0D14971p [Kluyveromyces lactis]
          Length = 1091

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 121/355 (34%), Gaps = 46/355 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y  + E        N      ++  +  + +   F       +  
Sbjct: 552 WCISRQLWWGHRCPVYFVNIEGEENDRNDNSFWVSGRNLEEAEAKAATKFADKKYTLEQD 611

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +   Y  +T    +     ++F+PA +   G DIL F    +      L+ 
Sbjct: 612 EDVLDTWFSSGL-YPFSTLGWPDKTPDMSQFYPASMLETGWDILFFWVSRMILLGLKLTG 670

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
           ++P  K+VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L++     ++   
Sbjct: 671 SIPF-KEVFCHSLVRDAQGRKMSKSLGNVVDPLDVISGIKLEDLHAKLLQGNLDPREVEK 729

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I      ++
Sbjct: 730 AKNGQKESYPHGIPECGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFAL 789

Query: 367 SMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             +  DY         G  +  ++ IL   +   + + E  + +    + + +       
Sbjct: 790 LRLGDDYKPPASEALSGNESLVEKWILHELTETAKNVNEAFEKRDFLNSTSAIYEFWYLV 849

Query: 424 VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   L +   + +  +       +I     ++  F+P ++ +++  L
Sbjct: 850 CDVYIENSK--YLIQEGTEVQQKSAKDTLYILIDNALKMIHPFMPFISEEMWQHL 902



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 170 FTIPAPPPNVTGSLHIGHALTIAIQDSLCRYYRMKGKTVLFLPGFDHAGIATQSVVEKQI 229

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++  +  ++    L  SYD      T + +      
Sbjct: 230 WASEKKTRHDYGREEFVDKVWEWKEEYHKKIKNQVKKLGASYDWSREAFTLDPKLSKAVV 289

Query: 108 ILWKKISDKGDIYK 121
             + K+ ++G IY+
Sbjct: 290 EAFVKLHEEGIIYR 303


>gi|71022153|ref|XP_761307.1| hypothetical protein UM05160.1 [Ustilago maydis 521]
 gi|46097801|gb|EAK83034.1| hypothetical protein UM05160.1 [Ustilago maydis 521]
          Length = 1087

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 119/301 (39%), Gaps = 17/301 (5%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y         + +PAD    G D     F+ +   A  L  
Sbjct: 535 EEVFDCWFESGSMPYAQAHYPFENKDKFERSFPADFISEGLDQTRGWFYTLLILATHLFD 594

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
             P    + S   +   G+K+SKSL N  DP  +I + G DA+R +L+       ++  +
Sbjct: 595 TAPWKNLIVSGLVLAADGKKMSKSLRNYPDPNLLINQYGADAIRLYLINSPVVRAENLRF 654

Query: 342 DKDGLKKRVNADLANGIGNLVSR--SVSMILKD----YDGMIPTPGAFTESDESILSVCS 395
            ++G+K+ V +     + +      SV++  KD    +     +  +    D  IL+ C 
Sbjct: 655 KEEGVKEVVASTFLPWLNSFRFFLGSVNLFEKDNGVKFVYANNSNMSSNVMDRWILARCQ 714

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++ I E M    ++  + ++  L+ E+ + Y    +     +   +     L    E 
Sbjct: 715 SLIKLISEEMAAYRLYTVVPRLGELIDELTNWYIRFNRRRLKGENGIEDTQAALNSLFET 774

Query: 455 IRQLAILLQAFVPKLANKIFDILF------VADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
           +  L   L +F P L   ++  L        +D+ + ++S+   L    +    FDP+  
Sbjct: 775 LFTLCRTLSSFTPFLTENLYQGLRKFLPPQASDDKQDYRSV-HFLSFPTVNESYFDPVIQ 833

Query: 509 R 509
           R
Sbjct: 834 R 834



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++         +    PH GH     + D++ R     G  V    G D HG  +   
Sbjct: 47  EGKKPFSFYDGPPFATGLPHYGHLLAGTVKDIVTRHAHSTGHYVDRRFGWDCHGLPVEHE 106

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V      +RD  + +   I +D+  +T +   
Sbjct: 107 IDKRLNIKGKEDVMAMGVDKYNAECKAIVMTYQSEWRDTVERMGRWIDFDNGYKTMDINF 166

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K +  KG +Y+G     YS       ++ E
Sbjct: 167 MESVWWVFKTLHSKGLVYQGIRVMPYSTACTTPLSNFE 204


>gi|258424172|ref|ZP_05687054.1| leucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845793|gb|EEV69825.1| leucyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P E+++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDEIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTSNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|76579652|gb|ABA49127.1| valyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 1002

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 450 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 509

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 510 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 566

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 567 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQA 626

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 627 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 683

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 684 TRFVLMNCEGHDCGFDKPEVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 743

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 744 FDNIANAIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 802

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 803 FITEALWQ 810



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 83  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 142

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 143 ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 200

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 201 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 255


>gi|189499524|ref|YP_001958994.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|229559916|sp|B3EMN5|SYL_CHLPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189494965|gb|ACE03513.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 806

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 11/218 (5%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D+++R+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIISRYKRSRGHNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   KV  ++N  +F+D    +  SYD    I TT+  ++   + ++ ++ D+G  
Sbjct: 89  AIKTGTHPKVITEKNVSSFKDTLMRMGFSYDWNREINTTDPGYYAWTQWIFLQLLDRGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +    ++EV +        A  + V       +  +++AY ++LLS 
Sbjct: 149 YTSEIDVNWCEELKTVLANEEVAEK------VADGHAVVRKPLRQWVLKITAYAERLLSD 202

Query: 180 YE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            +    PE +  ++R     S        L   R +  
Sbjct: 203 LDLVDWPESVKQMQRNWIGRSEGVEIDFQLPCHRTSLK 240



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 125/369 (33%), Gaps = 63/369 (17%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLS-AYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                Q Y  +  PV++ E+               +  YE       P+   +E +    
Sbjct: 419 WIFSRQRYWGEPIPVKYYEDGTLRPESDLPLTLPDIEAYEPTTTGESPLANISEWLYGTD 478

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                   +     W        ++I     +   +      +++            DL+
Sbjct: 479 ENGSFRRETNTMPQWAGSCWYYLRFIDPGNTEKPVDPKKEQYWMN-----------VDLY 527

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y   +         +S   P  K       +    EK+SKS GNVI  
Sbjct: 528 VGGAEHAVLHLLYARFWHKVLFDLGVVSTKEPFQKLFNQGMILGEDNEKMSKSRGNVIPA 587

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V+   G DA+R + +      +   ++ +G++         G+   +SR   +I    
Sbjct: 588 DQVLGSYGADAVRLYEMFLGPLEQVKPWNTNGIE---------GVSRFLSRVWRLIY--- 635

Query: 374 DGMIPTPGAFTESDESILSV-----CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               P PG+  E +E+ L+        + +++I ++ +    + A+++++  V+E     
Sbjct: 636 ----PEPGSMAELNEAPLTEDLTRTMHKAVKKITDHTEQLKFNTAISEMMVFVNE----- 686

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCF 486
                  L K+     + V          L +LL  + P +  ++++ +    +     +
Sbjct: 687 -------LHKSGSRNRTAV--------ETLLLLLSPYAPHICEELWEAIGHDTSITEENW 731

Query: 487 QSLDQRLKP 495
              D  L  
Sbjct: 732 PLFDPALAA 740


>gi|325860111|ref|ZP_08173237.1| isoleucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482396|gb|EGC85403.1| isoleucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 1221

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 109/308 (35%), Gaps = 40/308 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           +       ++ VW D+ +       Y    + +                           
Sbjct: 664 RPMHREADLIDVWFDSGSMPYAQLHYPFEGEINAEGLKATGKTEAEYRRELVHSTYEGTA 723

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F+PAD    G D     F  ++  A ++  ++     + S   +  KG K+SK +G
Sbjct: 724 VPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLVLDAKGNKMSKHVG 783

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVS 367
           NV DP E++ + G D +R++++       +  +D +G+ +         + N  S  ++ 
Sbjct: 784 NVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFALY 842

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
             +  YD            E D  I+S  + +++ +   ++N    RA   + + V    
Sbjct: 843 ANVDGYDAATCESVKAGAPEIDRWIISKLNSLIKGVTHELENFDPTRAGRLIDAFVNNDL 902

Query: 424 VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y   + ++ W   K       +        +  +A LL  F P  A++++  L    
Sbjct: 903 SNWYVRLNRKRFW--GKEMSADKKSAYDTLYTSLMTVARLLAPFAPFYADQLYKDLGGEL 960

Query: 482 ENRCFQSL 489
           E+      
Sbjct: 961 ESIHLDRW 968



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           +   +          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGNPQFIFFEGPPSANGHPGIHHVLARSIKDAFNRYKTMQGFQVHRKAGWDTHGLPVELG 97

Query: 60  --------KAAQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR--T 97
                   K   +   + K              V + +  ++ + + +    D      T
Sbjct: 98  VEKELGITKKDIDNHASPKYISTEDYNHKCRENVMKFTAEWKQLTEEMGYFVDMEHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|312795641|ref|YP_004028563.1| valyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167416|emb|CBW74419.1| Valyl-tRNA synthetase (EC 6.1.1.9) [Burkholderia rhizoxinica HKI
           454]
          Length = 953

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 120/364 (32%), Gaps = 57/364 (15%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      +  +    S    L+ +R     G  + 
Sbjct: 405 TTTYYQWLENIQDWCISRQLWWGHQIPAWYADDGQVFVAHSEADALAQARAQGYNG-ALK 463

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+  +       F P+ + V G DI+ F    +      
Sbjct: 464 RDED-VLDTWFSSALVPFSSLGWPQSTP-ELEHFLPSSVLVTGFDIIFFWVARMVMMTTH 521

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------- 319
            +  +P             +G+K+SKS GN +DPI++++                     
Sbjct: 522 FTGKVPFHTVYVHGLVRDAEGQKMSKSRGNTLDPIDIVDGIDLETLVAKRVTGLMNPKQA 581

Query: 320 -----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 582 ASIEQKTRKAFPDGIPAYGTDALRFTMASMATLGRNVSFDLARCEG--YRNFCNKLWN-A 638

Query: 363 SRSVSMILKDYDGMIPTPG---------AFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
           +R V M  + +D  I              F+ +D  ++S+  RV  ++ +   +      
Sbjct: 639 TRFVLMNCEGHDCGIAPCQGDCGPHGTLDFSPADRWLVSLLQRVEADVEKGFADYRFDNI 698

Query: 414 LAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +   V +   D Y +  K  +L+   P +        + V+  +  L    +P +  
Sbjct: 699 ANAIYKFVWDEYCDWYVELAKV-QLQTGTPAQQRGTRRTLLRVLETILRLAHPLMPFITE 757

Query: 472 KIFD 475
            ++ 
Sbjct: 758 ALWQ 761



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 38  QRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMRGENTLWVPGTDHAGIATQIVV 97

Query: 63  QNAG--------------------VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                          +      +R  R +    D S + F  T ++R 
Sbjct: 98  ERQLDAQKQSRHELGRERFIERVWQWKQESGSTITRQIRRLGASTDWSREYF--TMDERM 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ ++  +G IY+G     +  +     +D EV    +         P+
Sbjct: 156 SRVVTDVFVRLYQQGLIYRGKRLVNWDPKLRTAVSDLEVVSEEEDGKLWHIRYPL 210


>gi|298695026|gb|ADI98248.1| Leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +I+   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLIVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|254292383|ref|YP_003058406.1| leucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254040914|gb|ACT57709.1| leucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 860

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 6/223 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K Y+     YP+ + H+GH     + DV+ARFH  +G +VL   G D  G     AA
Sbjct: 34  DMPKAYVLEMFPYPSGRLHMGHVRNYAMGDVVARFHISNGYNVLHPMGWDAFGMPAENAA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G    V+  +N    ++    L +S D      T +  ++   + ++ K  +   ++
Sbjct: 94  MEKGAQPGVWTHENIDAMKEQFSPLGLSLDWKREFATCDADYYGQQQKIFLKFWENNLVF 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            V+  E E +  +++ Y + LL   
Sbjct: 154 RKKSKVNWDPVDNTVLANEQVIDGKG----WRSGAIVEQRELEQWTLKITHYAEDLLKGL 209

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +S   +   +            G             G +   D
Sbjct: 210 DSLDRWPEKVRTMQANWIGKSLGATFTWPFAGEAPKGHEKGID 252



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 25/195 (12%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP  +I + G D  R+F++ +    +D  + + G +          +  
Sbjct: 623 EKMSKSKKNVVDPSIIIGDYGADVARWFVLSDSPPERDVEWTQSGAEGAW--KFIQKLW- 679

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
                    L +             +   +L    + +  +   +++   + ++AQ+   
Sbjct: 680 --------SLAEAGPAEDDGEIGDGAASELLRATHKTIDGVTRGIKDFRFNTSVAQIHEF 731

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +             LKK    +   +       ++ LA L+  F P +A + +  L   
Sbjct: 732 SN------------TLKKAENAKGPGIATARRFALKTLAQLVSPFAPHVAEESWAALGGE 779

Query: 481 D--ENRCFQSLDQRL 493
               +  +   D++L
Sbjct: 780 GLVSSAPWPIADEKL 794


>gi|116074843|ref|ZP_01472104.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
 gi|116068065|gb|EAU73818.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
          Length = 882

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 73/202 (36%), Gaps = 5/202 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R   Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA 
Sbjct: 46  RPPFYALSMFPYPSGSLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAAI 105

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+   V+ D N    RD    L +S D      T    ++   + L+ ++   G  Y+
Sbjct: 106 ERGIDPGVWTDHNIGQMRDQLGRLGLSIDWTREQATCHDDYYRWTQWLFLELQQGGLAYQ 165

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V          A    V+      +F +++ Y D LL   +
Sbjct: 166 KEAQVNWDPIDQTVLANEQVDADGKSWRSGA---VVEKRLLRQWFLKITDYADALLDDLD 222

Query: 182 SHPEFILPIERRNEVISFVKSG 203
               +   +            G
Sbjct: 223 QLKGWPERVRTMQANWIGRSKG 244



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 18/181 (9%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANG 357
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++   R    L   
Sbjct: 634 FEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLWRL 693

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
           + +  + +   +    DG +  P   +E+++ +       + EI E++  +   + A+++
Sbjct: 694 VESAATNADQPVCLSGDGALTLPAELSEAEQEVRRAVHTAIAEIGEDLSGDFQFNTAISE 753

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L + +    +   P                V  E +  L  LL  F P LA + +  
Sbjct: 754 LMKLSNALSGALETVTP---------------AVRQEALSVLIRLLAPFAPHLAEEFWHR 798

Query: 477 L 477
           L
Sbjct: 799 L 799


>gi|225028693|ref|ZP_03717885.1| hypothetical protein EUBHAL_02972 [Eubacterium hallii DSM 3353]
 gi|224954003|gb|EEG35212.1| hypothetical protein EUBHAL_02972 [Eubacterium hallii DSM 3353]
          Length = 810

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      
Sbjct: 36  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKMLQGYYLIHPMGWDAFGLPAENY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K+    N +N +   +       +D  + TT+   +   + ++ K+   G  
Sbjct: 96  AIKMGTHPKITTASNIKNIKRQINEIAAIYDWDMEVNTTDPNFYKWTQWIFVKMFKAGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G          +PV     + +  R++ Y D+LL+ 
Sbjct: 156 YEKEMPINWCPSCKTGLANEEVVDG----CCERCGSPVTKKNLKQWMLRITKYADRLLND 211

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 212 LDKLDWPEKVKKMQTDWI 229



 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 42/258 (16%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+      +  +  KA  + P D+++ G +    H +Y   +         +  +
Sbjct: 509 WYFLRYVDNKNDKELVNREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLNDIGVIDFD 568

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K           G K+SKS GNV+ P +++ + G D+LR + +       D  +D 
Sbjct: 569 EPFKKLFNQGMITGKNGIKMSKSKGNVVSPDDLVRDYGCDSLRIYELFVGPPELDSEWDD 628

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++         G+   + R   + L + D  +            ++ V  +++ +I  
Sbjct: 629 KGIE---------GVNRFLKRFWKLALDNKDNDVKAT-------PELIKVRHKLVHDITN 672

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            + +  ++  ++  +      ++  +  K     K   D+         E +    ILL 
Sbjct: 673 RLNSFSLNTVISGFMEYN---NKLMELSK-----KGGVDK---------ETLETYIILLA 715

Query: 464 AFVPKLANKIFDILFVAD 481
            F P ++ ++++     D
Sbjct: 716 PFAPHVSEELWEQFGHTD 733


>gi|82751346|ref|YP_417087.1| leucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123740972|sp|Q2YTH9|SYL_STAAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82656877|emb|CAI81307.1| leucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 549 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +I+   +    +    T +++S+  V
Sbjct: 608 PLDAAIAWSEKGL---------DGSRRFLDRVWRLIVN--EDGTLSSKIVTTNNKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ ++ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 657 YNQTVKKVTDDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 698 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 733


>gi|331703680|ref|YP_004400367.1| Leucyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802235|emb|CBW54389.1| Leucyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 3/186 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +K YI     YP+    H+GH       DV +RF R+ G DVL   G D  G    + 
Sbjct: 28  SEKKAYILDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  QN  NF+   + +  SYD    I T +  ++ T + ++K++  KG  
Sbjct: 88  ALKTGNDPREFTLQNIENFKIQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         +DE+ +            PV   +   +  +++ Y DKLL  
Sbjct: 148 ENRDIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWVLKITDYADKLLDG 207

Query: 180 YESHPE 185
            ++   
Sbjct: 208 LDNLDW 213



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 43/234 (18%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL--------SANLPLPKKVFSHGFILHKGEKIS 304
            K+ P DL++ G++    H +Y   +            N P  +       +     K+S
Sbjct: 523 EKWLPVDLYIGGQEHAVGHLLYSRFWTHFLYDLGLLPTNEPFKRLFNQGMILGPDNRKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +VI+  G DALR + +          +  DGL               ++R
Sbjct: 583 KSWGNVINPDDVIDTHGSDALRLYEMFMGPLDASLPWSFDGLDAS---------LKWLNR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              MI K              ++  +  V + V++++ + +Q    + A++Q++ LV+ +
Sbjct: 634 CYRMINK--------IEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNTAISQLMVLVNAI 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +               +  +TV    +E       +L  F P L+ ++++ L 
Sbjct: 686 YK---------------EELNTVYKPYIEGF---VKMLSLFAPHLSEELWEKLG 721


>gi|257425871|ref|ZP_05602295.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257431172|ref|ZP_05607549.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433853|ref|ZP_05610211.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436770|ref|ZP_05612814.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282914552|ref|ZP_06322338.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282924898|ref|ZP_06332564.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|293503630|ref|ZP_06667477.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510646|ref|ZP_06669351.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537187|ref|ZP_06671867.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257271565|gb|EEV03711.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257278120|gb|EEV08768.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281946|gb|EEV12083.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284121|gb|EEV14244.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313264|gb|EFB43660.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282321733|gb|EFB52058.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|290920032|gb|EFD97100.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095296|gb|EFE25561.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466537|gb|EFF09058.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  + K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPERLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|282904333|ref|ZP_06312221.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906158|ref|ZP_06314013.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909075|ref|ZP_06316893.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911383|ref|ZP_06319185.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282919520|ref|ZP_06327255.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|283958511|ref|ZP_06375962.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428334|ref|ZP_06820963.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590702|ref|ZP_06949340.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|282317330|gb|EFB47704.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282325078|gb|EFB55388.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327339|gb|EFB57634.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331450|gb|EFB60964.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595951|gb|EFC00915.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790660|gb|EFC29477.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295127734|gb|EFG57371.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575588|gb|EFH94304.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437784|gb|ADQ76855.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|108759560|ref|YP_632229.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108463440|gb|ABF88625.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 828

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 10/202 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K YI     YP+    H+GH       D+++R+ R+ G DVL   G D  G    + 
Sbjct: 34  GKPKAYILDMFPYPSGAGLHVGHPEGYTATDIVSRYLRMRGYDVLHPMGWDAFGLPAEQH 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N   F+     L  SYD    + TT+  +    + L+ K+ D+G  
Sbjct: 94  ALETGTHPADTTAKNVATFKRQLKSLGFSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G          +PV  +    +  R++AY D+L   
Sbjct: 154 YQAELPVNWCAALGTVLANEEVIDGKS----ERGSHPVVRLPLRQWTLRITAYADRLAED 209

Query: 180 YESHPEFILPIERRNEVISFVK 201
                    P  R  ++    +
Sbjct: 210 L---SGLDWPETREKQLHWIGR 228



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 104/284 (36%), Gaps = 45/284 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW----PADLHVIGKDILRFHAIY---WP 276
               M  W  +   YL      +       + +    P DL+V G +    H +Y   W 
Sbjct: 511 ETNTMPQWAGSCWYYLRFIDPKNTQAIFSQQAYDAWMPVDLYVGGSEHAVLHLLYARFWH 570

Query: 277 AFLLSANL-----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
             L    L     P  K V     +    EK+SKS GNV++P +++ + G DALR + + 
Sbjct: 571 KVLFDCGLVTHAEPFKKLVHQGMILGENNEKMSKSRGNVVNPDDIVRQFGADALRMYEMF 630

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    +  +G+          G+   + R  +M+    +     P   TE    +L
Sbjct: 631 MGPLEAVKPWQTNGVI---------GVRRFLDRVWNMLAFVTEDAGGAPAELTEDARRLL 681

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+++    + A++ ++ L +                      + +  V 
Sbjct: 682 ---HKTVKKVGEDIEALRFNTAVSAMMILANA--------------------LAELPRVP 718

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +E  R  A +L  F P L+ +++   + A E+   Q   +    
Sbjct: 719 LEAARVFARILSPFAPHLSEELWHR-WGASESISLQPWPEYDPA 761


>gi|324994299|gb|EGC26213.1| leucine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 833

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEELDWPESIKDMQRNWI 224



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +       + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEDLLRAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDIGAVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    TE+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLLN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 710 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 749

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 750 QTGESISYVAWPT 762


>gi|283471024|emb|CAQ50235.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|323439586|gb|EGA97306.1| leucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442033|gb|EGA99669.1| leucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|314933910|ref|ZP_07841275.1| leucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654060|gb|EFS17817.1| leucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNVQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRKPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESIKDMQRNWIGRSE 226



 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 104/281 (37%), Gaps = 44/281 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPDNENMIADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +    EK+SKS GNVI+P +++   G D LR + +    
Sbjct: 549 YDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVINPDDIVSSHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 + ++GL         +G    + R   +I+   +           +D+S+  V 
Sbjct: 609 LDAAIAWSENGL---------DGSRRFLDRVWRLIV--TEDGSLNNKIVESNDKSLDKVY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
           ++ ++++ E+      + A++Q++  +++  +  +  KP+                    
Sbjct: 658 NQTVKKVTEDFDALSFNTAISQLMVFINDCYKANEIYKPY-------------------- 697

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
           I     +L    P +  +++  L   +    + + + D+ L
Sbjct: 698 IEGFVKMLAPIAPHICEELWSKLGHNETITYQPWPTFDESL 738


>gi|187929520|ref|YP_001900007.1| valyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309781704|ref|ZP_07676437.1| valine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187726410|gb|ACD27575.1| valyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308919345|gb|EFP65009.1| valine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 958

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 128/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +S    ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 379 PEGTRFPGRSIAEVALDAVQSGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 436

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  +     ++ G+  +   
Sbjct: 437 AWYDEAGNVYVGRTEEEARAQAAAKGYTGALKRDDDVLDTWFSSALVPFSSLGWPADTPE 496

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 497 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFHTVYVHGLVRDSEGKKMSKSEG 555

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 556 NTLDPVDLIDGIALEPLLAKRTTGLRRPKDAPKVEKRTRKEFPDGIPAFGADALRFTFAS 615

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G+   +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 616 LATLGRSINFDPGRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGMQECVGDCGPEGYLD 672

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+++D  I+S+  RV  E+ +   +         +   V +   D Y +  K  +++   
Sbjct: 673 FSQADRWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWYLELAKV-QIQTGT 731

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 732 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 766



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 18/146 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 38  GKPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMAGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        + +Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGVSRHDMGREKFVEKVWEWKEQSGSTITRQVRRMGASIDWEREYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSL 130
               ++ ++ ++G IY+G     +  
Sbjct: 158 AVSDVFVRLYEQGLIYRGKRLVNWDP 183


>gi|21283430|ref|NP_646518.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|253732411|ref|ZP_04866576.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734458|ref|ZP_04868623.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297207527|ref|ZP_06923963.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911611|ref|ZP_07129055.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|32171568|sp|Q8NW17|SYL_STAAW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21204871|dbj|BAB95566.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|253723801|gb|EES92530.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727512|gb|EES96241.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|296887863|gb|EFH26760.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300887032|gb|EFK82233.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 807

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 494 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 551

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 552 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 610

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 611 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 659

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 660 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 700

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 701 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 736


>gi|329733103|gb|EGG69440.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|257428538|ref|ZP_05604936.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275379|gb|EEV06866.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  + K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPERLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|148268236|ref|YP_001247179.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394304|ref|YP_001316979.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794141|ref|ZP_05643120.1| leucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415845|ref|ZP_05682116.1| leucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420674|ref|ZP_05683613.1| leucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438324|ref|ZP_05689608.1| leucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443782|ref|ZP_05692121.1| leucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445993|ref|ZP_05694169.1| leucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448279|ref|ZP_05696406.1| leucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454193|ref|ZP_05702164.1| leucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203396|ref|YP_003282665.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893252|ref|ZP_06301486.1| leucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927887|ref|ZP_06335498.1| leucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295406069|ref|ZP_06815877.1| leucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297245006|ref|ZP_06928883.1| leucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|189083152|sp|A6U2M4|SYL_STAA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083153|sp|A5ITT0|SYL_STAA9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147741305|gb|ABQ49603.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946756|gb|ABR52692.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788113|gb|EEV26453.1| leucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839438|gb|EEV63911.1| leucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843278|gb|EEV67688.1| leucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848368|gb|EEV72359.1| leucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851188|gb|EEV75131.1| leucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855235|gb|EEV78174.1| leucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858518|gb|EEV81394.1| leucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863645|gb|EEV86402.1| leucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075686|gb|ACY11659.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590397|gb|EFB95476.1| leucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764570|gb|EFC04696.1| leucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|294969066|gb|EFG45087.1| leucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297178086|gb|EFH37334.1| leucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|329727097|gb|EGG63553.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 805

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|60390712|sp|Q6MSR0|SYL_MYCMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|301320514|gb|ADK69157.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 3/186 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +K YI     YP+    H+GH       DV +RF R+ G DVL   G D  G    + 
Sbjct: 28  SEKKAYILDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  QN  NF+   + +  SYD    I T +  ++ T + ++K++  KG  
Sbjct: 88  ALKTGNDPREFTLQNIENFKIQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         +DE+ +            PV   +   +  +++ Y DKLL  
Sbjct: 148 ENRDIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWVLKITDYADKLLDG 207

Query: 180 YESHPE 185
            ++   
Sbjct: 208 LDNLDW 213



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 43/234 (18%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL--------SANLPLPKKVFSHGFILHKGEKIS 304
            K+ P DL++ G++    H +Y   +            N P  +       +     K+S
Sbjct: 523 EKWLPVDLYIGGQEHAVGHLLYARFWTHFLYDLGLLPTNEPFKRLFNQGMILGPDNRKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +VI+  G DALR + +          +  DGL               ++R
Sbjct: 583 KSWGNVINPDDVIDTHGADALRLYEMFMGPLDASLPWSFDGLDAS---------LKWLNR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              MI K              ++  +  V + V++++ + +Q    + A++Q++ LV+ +
Sbjct: 634 CYRMINK--------IEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNTAISQLMVLVNAI 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +               +  +TV    +E       +L  F P L+ ++++ L 
Sbjct: 686 YK---------------EELNTVYKPYIEGF---VKMLSLFAPHLSEELWEKLG 721


>gi|49486583|ref|YP_043804.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|56749379|sp|Q6G8G9|SYL_STAAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49245026|emb|CAG43487.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 806

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 493 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 550

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 551 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 609

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 610 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 658

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 659 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 699

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 700 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 735


>gi|329768427|ref|ZP_08259919.1| leucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836989|gb|EGF86634.1| leucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 809

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+    H+GH       D+L+R+ R +G +VL   G D  G    + 
Sbjct: 29  TKEKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F   N   FR     L  SY  D  + TT+ +++   + ++KK+ +KG  
Sbjct: 89  ALDTGNDPRDFTKTNIDTFRRQIKELGFSYDWDREVNTTDPKYYKWTQWIFKKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +        +++EV  G          +PV+      +  +++ Y +KLL+ 
Sbjct: 149 YVDEVPVNWCPALGTVLSNEEVIDGKS----ERGGHPVERRPMRQWVLKITDYAEKLLAD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDILDW 210



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 51/268 (19%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K+W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNDEMFADPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGE-----KISKSLGNVIDPIEVIEEVGVDALRYFL 329
                + +  P  K +F+ G IL +G+     K+SKS GNV++P ++I   G D LR + 
Sbjct: 549 YDLGLVPSREPFQK-LFNQGMILAEGKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVYE 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          + ++GL         +G    + R   + + D +          + +  
Sbjct: 608 MFMGPLDASIAWSENGL---------DGSRRFLDRVYRLFV-DEETGKVNDKVQDKDNAE 657

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTV 447
           +    +  ++++ E+++    + A++Q++  V++  +  Y     P +            
Sbjct: 658 LEVSYNYTVKKVSEDIEILGFNTAISQLMVFVNDCYKAEYI----PRKYALG-------- 705

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
                        LL  F P LA ++++
Sbjct: 706 ----------FIQLLAPFAPHLAEEMWE 723


>gi|288802784|ref|ZP_06408221.1| isoleucine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334601|gb|EFC73039.1| isoleucine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 1221

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 110/308 (35%), Gaps = 40/308 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           K       ++ VW D+ +       Y    + +                           
Sbjct: 664 KPMHRESDLIDVWFDSGSMPYAQLHYPFEGEINAEGLKATGKTEAEYRDQLIHSCYEGIA 723

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK +G
Sbjct: 724 VPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVG 783

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVS 367
           NV +P E++++ G D +R++++       +  +D +G+ +         + N  S  ++ 
Sbjct: 784 NVTNPFEMMDKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFALY 842

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
             +  YD            E D  I+S  + +++ +   +++    RA   + S V    
Sbjct: 843 ANVDGYDATTCEAVKADAPEIDRWIISKLNSLIKGVTAELEDFDPTRAGRLIDSFVNNDL 902

Query: 424 VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y   + ++ W   K       +        +  +A LL  F P  A++++  L    
Sbjct: 903 SNWYVRLNRKRFW--GKEMSADKKSAYDTLYTCLMTVARLLAPFAPFYADQLYSDLGGNS 960

Query: 482 ENRCFQSL 489
           E+      
Sbjct: 961 ESIHLDRW 968



 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGDPQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMQGFQVHRKAGWDTHGLPVELG 97

Query: 62  AQNA----------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--T 97
            +                            +  V + +  ++ + + +    D      T
Sbjct: 98  VEKELGITKKDIDNHASDKYISTEEYNHKCRENVMKFTAEWKQLTEEMGYFVDMEHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|255690192|ref|ZP_05413867.1| isoleucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624306|gb|EEX47177.1| isoleucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 1162

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 100/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--KFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y           + +PAD    G D     F  ++
Sbjct: 623 KPMKREMDLIDVWFDSGSMPYAQIHYPFENKELLDSRQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D DG+++                 +   +  ++            E D  ILS
Sbjct: 743 PWDNLKFDVDGIEEVRRKFFGTLYNTYSFFVLYANVDGFEYKEADVPMAERPEIDRWILS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 803 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 861 QTLYICLETVAKLMSPIAPFYADRLYTDLITA 892



 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 63/207 (30%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +       T 
Sbjct: 94  VELGVEKALGITKEDIGKKISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTMVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKIKNPKPEMTGWGTPYFLAWTTTPW 239


>gi|49484005|ref|YP_041229.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749408|sp|Q6GFU3|SYL_STAAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49242134|emb|CAG40834.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|315195672|gb|EFU26059.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 549 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 608 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 657 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 698 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 733


>gi|47565165|ref|ZP_00236208.1| leucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557951|gb|EAL16276.1| leucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 145/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|302333422|gb|ADL23615.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 804

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 549 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 608 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 657 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 698 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 733


>gi|300176388|emb|CBK23699.2| unnamed protein product [Blastocystis hominis]
          Length = 1091

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 133/424 (31%), Gaps = 101/424 (23%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                     + V+ + +  ++        + +         ILP E  N    +++  +
Sbjct: 470 MQIPVCTRTGDIVEPLLKPQWYVDCKEAAQRAVEAVRKGELSILPKEHENTWYRWLE-NI 528

Query: 205 KDLSLSRKTFDWG---------------------------------------------IK 219
            D  +SR+   WG                                             + 
Sbjct: 529 HDWCISRQ-LWWGHRIPAYKVLVKQGDAVKDDDVWVAAHDEAEAIAKGAAKLGVKPEEVT 587

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +  DP  ++  W  +     +  G+    +  +A F+P  L   G DIL F    +   +
Sbjct: 588 VEQDPD-VLDTWFSSGLFPFSVFGWPRQTEDLEA-FFPTTLLETGHDILFFWVARMVMMS 645

Query: 278 FLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVI------------------- 317
             L+  LP  ++V+ H  I  K G K+SKSLGNVIDP+E+I                   
Sbjct: 646 LELTDKLPF-RQVYLHAMIRDKYGRKMSKSLGNVIDPLEIINGCDLESMLEKIRHGNLDP 704

Query: 318 ------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
                                G DALR+ L+     G +   D   +      +  N + 
Sbjct: 705 AEVERASQGKRQDFPEGIPMCGTDALRFGLLAYTIQGMNINLDIQRVIG--YRNFCNKLW 762

Query: 360 NLVSRSVSMILKDY-----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
           N V   + M L+ +     D            D+ ILS  S+      +  +        
Sbjct: 763 NAVKFGL-MNLEGFTATEEDVASLDVAQLAPRDQWILSKLSQTAAACNKCFEEYEFAGVT 821

Query: 415 AQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
            QV +       DRY +  KP  +  T+ +            + Q   LL   +P +  +
Sbjct: 822 TQVYNFWLYMLCDRYLEMIKP-VINGTDAEAKKKAQLTLYICLEQGLRLLHPLMPFITEE 880

Query: 473 IFDI 476
           ++  
Sbjct: 881 LWQR 884



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 35/212 (16%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +           H+GHA    I D + R+ R+ G + L+  G D  G       + 
Sbjct: 147 KKFVMVIPPPNVTGSLHLGHALTNSIEDAIVRWKRMSGCETLWVPGVDHAGIATQVVVEK 206

Query: 65  AGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                     +    + +       L  S D      T +      
Sbjct: 207 QLMKDEGKTRHDLGREAFVEKVWEWKRNYANSITHQLRRLGTSVDWSREAFTMDPNLTAA 266

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
            +  + ++ +KG IY+                   +               V++++ EG 
Sbjct: 267 VKEAFVRLFEKGKIYRS----------------RRLVNWCCQLRTALSDIEVEYIDLEGR 310

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
             R        L  +    +F  P+E  +E I
Sbjct: 311 TLRKVPGHGDKLYEFGCITKFAYPVENSDEKI 342


>gi|229093847|ref|ZP_04224941.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689526|gb|EEL43337.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 141/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|30264808|ref|NP_847185.1| leucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530293|ref|YP_021642.1| leucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187628|ref|YP_030881.1| leucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140764|ref|YP_086065.1| leucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65322109|ref|ZP_00395068.1| COG0495: Leucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118479871|ref|YP_897022.1| leucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165869770|ref|ZP_02214428.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167633827|ref|ZP_02392150.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638006|ref|ZP_02396284.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686005|ref|ZP_02877228.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170705342|ref|ZP_02895806.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177651275|ref|ZP_02934106.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568330|ref|ZP_03021238.1| leucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196033128|ref|ZP_03100541.1| leucyl-tRNA synthetase [Bacillus cereus W]
 gi|196044043|ref|ZP_03111280.1| leucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905973|ref|YP_002453807.1| leucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866730|ref|YP_002752108.1| leucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817533|ref|YP_002817542.1| leucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917393|ref|ZP_04080944.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929795|ref|ZP_04092811.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936052|ref|ZP_04098861.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948491|ref|ZP_04110772.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124310|ref|ZP_04253500.1| Leucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186998|ref|ZP_04314149.1| Leucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229600203|ref|YP_002869016.1| leucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687549|ref|ZP_05151405.1| leucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725114|ref|ZP_05186897.1| leucyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736852|ref|ZP_05194558.1| leucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741887|ref|ZP_05199574.1| leucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754515|ref|ZP_05206550.1| leucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757348|ref|ZP_05209375.1| leucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|33301675|sp|Q81KK6|SYL_BACAN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|60390677|sp|Q632V2|SYL_BACCZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230609|sp|A0RJX2|SYL_BACAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226731224|sp|B7JT07|SYL_BACC0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782481|sp|C3PBK0|SYL_BACAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782482|sp|C3LAX2|SYL_BACAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782483|sp|C1EW09|SYL_BACC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30259483|gb|AAP28671.1| leucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505441|gb|AAT34117.1| leucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181555|gb|AAT56931.1| leucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974233|gb|AAU15783.1| leucine--tRNA ligase (leucyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419096|gb|ABK87515.1| leucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164714599|gb|EDR20118.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513823|gb|EDR89191.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167530628|gb|EDR93330.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170129467|gb|EDS98330.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670469|gb|EDT21209.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083101|gb|EDT68163.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560586|gb|EDV14563.1| leucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994557|gb|EDX58512.1| leucyl-tRNA synthetase [Bacillus cereus W]
 gi|196025379|gb|EDX64049.1| leucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218537193|gb|ACK89591.1| leucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787736|gb|ACO27953.1| leucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227003674|gb|ACP13417.1| leucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596450|gb|EEK54119.1| Leucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659133|gb|EEL14783.1| Leucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811171|gb|EEM57511.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823599|gb|EEM69422.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829852|gb|EEM75473.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842235|gb|EEM87332.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229264611|gb|ACQ46248.1| leucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 141/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|228961008|ref|ZP_04122636.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798641|gb|EEM45626.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|228987994|ref|ZP_04148099.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771741|gb|EEM20202.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|206559815|ref|YP_002230579.1| valyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|198035856|emb|CAR51747.1| putative valyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 955

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 120/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   ++     + +      G  + 
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARNEEDARAQAAAKGYTG-ALK 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSSLGWPNETPELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFHTVYMHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLESLVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  R   +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGNDKPEVCGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                + +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIASSIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVV 95

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        +  ++     D    L  S D      T + +   
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKQKSGSTITDQVRRLGASTDWSREYFTMDDKMSA 155

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 156 AVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|196040876|ref|ZP_03108174.1| leucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196028330|gb|EDX66939.1| leucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 141/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|49481694|ref|YP_038784.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|60390705|sp|Q6HCE2|SYL_BACHK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49333250|gb|AAT63896.1| leucine--tRNA ligase (leucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 802

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 141/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|284166577|ref|YP_003404856.1| valyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016232|gb|ADB62183.1| valyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 928

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 65/452 (14%), Positives = 141/452 (31%), Gaps = 37/452 (8%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE       A    G++T+           +  +      D +    
Sbjct: 305 WYQAHDLPLRVAIDESATMTDLAGDYEGMSTEEA----REAIVEDLEDEGYLRDRW---- 356

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                   ++  +  +         +        E Y            + ++   + ++
Sbjct: 357 --EISHAVQVHERCDTAVEYRVSKQWYVEILDHKEEYLEAGREMDWYPEKMFSRYKHWIE 414

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E +    R          +Y +  +  +  +R    +  +       S      + G 
Sbjct: 415 GLEWDWLISRQRDSGIPFPVWYCADCDHEIMADRETLPVDPLSDEPPVDSC----PECGA 470

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFHAI 273
                 + +   W  +    L   G+  +         K + +P DL   G DI+ F   
Sbjct: 471 DDFVAEEDVFDTWATSSLTPLINAGWDWDEDAEEFRMEKPELYPFDLRPQGHDIISFWLF 530

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    EK+SKS GNV++P EV+ +  VDA+R++   
Sbjct: 531 HTIVKCYEHTGEVPFDATMINGHVLDENREKMSKSRGNVVEPDEVLADFPVDAVRFW-AA 589

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  Y +  L           +   +  +  ++          P      D  +L
Sbjct: 590 SAAVGDDFPYQEKDLTAGE------KLLRKLWNASKLVDTLAPREPEEPAELEAIDRWLL 643

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     + ++  +++     +A  ++ +       D Y +      + KT  D  ST  Y
Sbjct: 644 AELDDAVDDLTAHLEEYEFAKARDRLRTFFWNTFCDDYLE------IAKTREDEPST-QY 696

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 R    L   F+P    +I+  ++  D
Sbjct: 697 ALRTAHRTFLELWAPFLPHATEEIWQAVYSDD 728



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 15/160 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I T     +   H+GH Y   + D  AR+ R+   DVLF  G D++G    +  ++  
Sbjct: 58  YAIDTPPPTVSGSLHMGHLYGSTLQDFAARYQRMADGDVLFPFGYDDNGIASERLTESEL 117

Query: 67  VT-------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +    +    F +    L   I +++  +T E R     ++ + 
Sbjct: 118 DIRHQDYERREFQELCREVCQEYEAEFTEKMQDLGTSIDWNNTYKTIEPRVQRVSQLSFL 177

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
            + +KG  Y+      +    E   +  E+     G ++N
Sbjct: 178 DLYEKGREYRKKAPAIWCPDCETAISQVEMEDDERGSHFN 217


>gi|269303038|gb|ACZ33138.1| leucyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 820

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 7/212 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+    H+GH       D++AR+ R  G  VL   G D  G    +
Sbjct: 28  EDKVKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRARGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   KV   +N  NF+     +  SYD      T++  ++   + L+  + D+G 
Sbjct: 88  YAIRTGTHPKVTTQKNIANFKKQLSAMGFSYDEGREFATSDPDYYHWTQKLFLFLYDQGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++EV  G           PV+      +  +++AY DKLL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEVENGFS----IEGGYPVERKMLRQWILKITAYADKLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             ++        + +   I   +  L    L+
Sbjct: 204 GLDALDWPENVKQLQKNWIGKSEGALVTFHLT 235



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/453 (13%), Positives = 129/453 (28%), Gaps = 96/453 (21%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNP 156
            ++R  +        I +  D    C    Y+       +  E      +     +    
Sbjct: 340 HDERDREFAEKFSLPIHEVIDDDGVCIHSTYNDFCLNGLSGQEAKDYVINYLEMRSLGRA 399

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLS 208
                   + F    Y  + +           P+E           +       G   L+
Sbjct: 400 KTMYRLRDWLFSRQRYWGEPIPIIHFEDGTHRPLEHDELPLLPPNIDDYRPEGFGQGPLA 459

Query: 209 LSRKTFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADL 260
            ++       +    P     Y M  W  +   YL      +        K  +W P DL
Sbjct: 460 KAQDWVHIYDEKTGRPGCRETYTMPQWAGSCWYYLRFCDAHNSQLPWSKEKETYWMPVDL 519

Query: 261 HVIGKDILRFHAIY---WPAFLLSANL-----PLPK------------------KVFSHG 294
           ++ G +    H +Y   W      A L     P  K                   V    
Sbjct: 520 YIGGAEHAVLHLLYSRFWHRVFYDAGLVSTPEPFKKLINQGLVLAFSYRIPGKGYVSIED 579

Query: 295 FILHKG--------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
                G              EK+SKS  N +DP  +IEE G DALR + +      K+  
Sbjct: 580 VREENGTWISTCGEIVEVRQEKMSKSKLNGVDPQVLIEEYGADALRMYAMFSGPLDKNKT 639

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  +G+          G    ++R   ++         +       D   L +  +++  
Sbjct: 640 WSNEGV---------GGCRRFLNRFYDLVT--------SSEVQDIEDRDGLVLAHKLVFR 682

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           I E+++   ++   +  +  +++  +                    +   +   +     
Sbjct: 683 ITEHIEKMSLNTIPSSFMEFLNDFSK--------------------LPVYSKHALSMAVR 722

Query: 461 LLQAFVPKLANKIFDILFVAD--ENRCFQSLDQ 491
           +L+   P ++ +++ IL      +   +  +D+
Sbjct: 723 VLEPIAPHISEELWVILGNPPGIDQAAWPQIDE 755


>gi|229158352|ref|ZP_04286417.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625099|gb|EEK81861.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 141/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|288574922|ref|ZP_06393279.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570663|gb|EFC92220.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 924

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 136/414 (32%), Gaps = 40/414 (9%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN--DDEVYKGADGQYYNA 152
            R+T++   +  +   + +    D+ +           +  YN   D        Q    
Sbjct: 412 FRSTDQWFVNVAQFRQQAL----DVIENEVKWIPDWGKDRIYNMVRDRSDWCISRQRVWG 467

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
              PV + ++ G           +    +     +   E   E++  +           K
Sbjct: 468 VPIPVFYCQDCGKMLLDPDAIRLVQQKVKERGGDVWWQESPEELLGDL----------CK 517

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G       + IM VW D+  ++                 WPADL++ G D     F
Sbjct: 518 CPSCGSGNLKKEKDIMDVWFDSGISHFAVLENRP------ELSWPADLYLEGSDQHRGWF 571

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                 +       P    +     +  KG+K+SKS+GNV+ P E+I+  G D LR ++ 
Sbjct: 572 QTSLLTSVATRGVAPYKAVLTHGFIVDGKGKKMSKSIGNVVAPQEIIDTNGADILRLWVA 631

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDE 388
                  D    K  +  R  ++    I N   R +   L D++      +    +  D 
Sbjct: 632 STDY-KNDIRISKTII--RTLSEEYRRIRNTA-RFLLGNLCDFNPSTDFVSEAEMSSFDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT-NPDRAS 445
            ILS  +R+++ + +   +   H     +           Y DA K        N     
Sbjct: 688 WILSRLNRLIKRVTKGYDSYEFHIPTVSIHQFCVNELGSLYLDAAKDSLYADALNFKGRR 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-------CFQSLDQR 492
            +  V   ++  L+ +L   +   + +I+  L   DE+         +   D+R
Sbjct: 748 AIQTVMWRIVTALSTMLAPVLSFTSEEIWRELRKIDESLEKSVFLADWPLFDER 801



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    +     Y N   HIG A+  II D + +F  + G    +  G D HG  I   
Sbjct: 47  EDKPSFILHDGPPYANGDIHIGTAFNKIIKDFIVKFKSMRGYRCPYVPGWDTHGLPIELK 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI---------------SYDDFIRTTEKRHHDTC 106
                   K  +D      R     L                  +++   T +  +    
Sbjct: 107 VLKGEGVDKDSIDPVELRRRCTDYALGFLDSQRSQFRRLGGVGDWENPYITLKPEYEAAQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++  + +KG +YKG    ++ +  +      E+  G +
Sbjct: 167 IGVFADMVEKGLVYKGQKPVYWCIDCQTALAAAEIEYGDE 206


>gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 927

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 16/265 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++L                WPADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSHLAVLDEKTVWP---ELSWPADLYLEGSDQHRGWFNSSLSTSV 574

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KG K+SKSLGNV+DP++VI+++G D LR ++        D
Sbjct: 575 AVTGRAPYRAVLTHGFLVDEKGRKMSKSLGNVVDPLKVIQQLGADILRLWV-SSADYKSD 633

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
               ++ LK+   ++    I N     +S I  D+D            E D   L    R
Sbjct: 634 LAVSQNILKQL--SEAYRKIRNTCRFLLSNIY-DFDPSADQVAYEKMVELDRWALLKLHR 690

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK--KTNPDRASTVLYVTV 452
           +++++     +   H     + +   V   +RY D  K         +PDR      V  
Sbjct: 691 LIEKVLNAYHDYEFHVVYHAIHNFCTVDMSNRYLDIIKDRLYTSPAESPDR-RAAQTVLY 749

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
            ++  L  LL   +   + +I+  +
Sbjct: 750 LILDALVRLLTPVLAFTSEEIWKHM 774



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N   H+GH    I+ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  EGKPKFILHDGPPYANGDIHLGHTLNKILKDIIVKYKSMTGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
           A  A                 K +  +     ++    L +   +D    T         
Sbjct: 105 AIKALGINRHEVDTVVFRNKCKEYALKFVGIQKEEFIRLGVRADWDRSYVTLMPHFEARQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ +G IYKG    ++    E    + EV              PV
Sbjct: 165 IGVFGEMAKRGYIYKGLKPVYWCASCETALAEAEVEYQDKKSPSIYVRFPV 215


>gi|188585946|ref|YP_001917491.1| Isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|254782421|sp|B2A2I8|SYI_NATTJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|179350633|gb|ACB84903.1| Isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 926

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 98/290 (33%), Gaps = 19/290 (6%)

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G K       IM VW D+ + +                 WP DL++ G D     F 
Sbjct: 512 CSCGAKKFSKETDIMDVWFDSGSTHRGVCAQRQ------ELAWPVDLYLEGSDQYRGWFQ 565

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    A       P  + + +   +  +G+K+SKS GNVI P ++  + G D LR ++  
Sbjct: 566 SSLLTAVATKGESPYRECLTNGWVVDGEGKKMSKSQGNVIAPQDITNQYGADILRLWVAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESI 390
                +D    +  LK+   A+    I N     +  +     +    +     E D  I
Sbjct: 626 SE-FKQDVRVSQKILKQ--TAEAYRKIRNTARFILGNLYDFTPEKDYVSFDQLEEIDSYI 682

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPWELKK-TNPDRASTV 447
           L    +V+ +          H     + +  V E+ + Y D  K       T        
Sbjct: 683 LCRLQKVIDQATRAYDEFEFHEFYHLIHNFCVVELSQFYLDVIKDRIYTMPTESRERRAA 742

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN----RCFQSLDQRL 493
                 ++  L  +L   +   + +I+  L    E       +  +++ L
Sbjct: 743 QTTMYYLLDSLVKMLAPVLTFTSEEIWQYLPGDREESIQLTDWPEVNEEL 792



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  +     Y N   H+GHA   ++ D++ +F  + G D  +  G D HG  I   
Sbjct: 45  SGKPKYILHDGPPYANGNIHMGHALNKVLKDIVVKFKTMQGYDSPYVPGWDTHGLPIEHQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                  +  +     ++    L +   +D+   T         
Sbjct: 105 ITKTEKVDRKSMSDVEFRKKCHDYAMKYVEIQKEEFKRLGVRGDWDNPYLTLSPEFEAEQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             L+ +++ KG IYKG    ++    E    + EV     
Sbjct: 165 VKLFGEMAQKGYIYKGLKPVYWCTDCETALAEAEVEYHDK 204


>gi|221141486|ref|ZP_03565979.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262049067|ref|ZP_06021945.1| leucyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|284024805|ref|ZP_06379203.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|259162884|gb|EEW47448.1| leucyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|302751585|gb|ADL65762.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|315197228|gb|EFU27567.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
          Length = 804

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 549 YDLAIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 608 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 657 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 698 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 733


>gi|57652056|ref|YP_186641.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160962|ref|YP_494398.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195572|ref|YP_500378.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221863|ref|YP_001332685.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509976|ref|YP_001575635.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|258452309|ref|ZP_05700322.1| leucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282925645|ref|ZP_06333294.1| leucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294849919|ref|ZP_06790658.1| leucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304380647|ref|ZP_07363318.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|71153567|sp|Q5HF16|SYL_STAAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123003450|sp|Q2FXH2|SYL_STAA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123749601|sp|Q2FFY0|SYL_STAA3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|172048950|sp|A6QHU1|SYL_STAAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083154|sp|A8Z4I6|SYL_STAAT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57286242|gb|AAW38336.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126936|gb|ABD21450.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203130|gb|ABD30940.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374663|dbj|BAF67923.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368785|gb|ABX29756.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257860034|gb|EEV82869.1| leucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|269941236|emb|CBI49624.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282592425|gb|EFB97439.1| leucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294823258|gb|EFG39688.1| leucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304340754|gb|EFM06683.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140775|gb|EFW32626.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143786|gb|EFW35560.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314433|gb|AEB88846.1| Leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329727013|gb|EGG63470.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 805

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 30  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 90  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 150 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 206 LDDLDWPESLKDMQRNWIGRSE 227



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 492 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 549

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 550 YDLAIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 608

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 609 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 657

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 658 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 699 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 734


>gi|15924750|ref|NP_372284.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927335|ref|NP_374868.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|156980077|ref|YP_001442336.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006546|ref|ZP_05145147.2| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|296276048|ref|ZP_06858555.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039680|sp|P67513|SYL_STAAN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042038|sp|P67512|SYL_STAAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231647|sp|A7X3J9|SYL_STAA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13701554|dbj|BAB42847.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247532|dbj|BAB57922.1| leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722212|dbj|BAF78629.1| leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|285817440|gb|ADC37927.1| Leucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|312830136|emb|CBX34978.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130602|gb|EFT86588.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
          Length = 804

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNVI+P ++++  G D LR + +   
Sbjct: 549 YDLGIVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + + GL         +G    + R   +++   +    +    T +++S+  V
Sbjct: 608 PLDAAIAWSEKGL---------DGSRRFLDRVWRLMVN--EDGTLSSKIVTTNNKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+ +    + A++Q++  ++E  +  +  KP+                   
Sbjct: 657 YNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPY------------------- 697

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            I     +L    P +  +++  L   +E+  +Q    
Sbjct: 698 -IEGFVKMLAPIAPHIGEELWSKLG-HEESITYQPWPT 733


>gi|301056248|ref|YP_003794459.1| leucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378417|gb|ADK07321.1| leucyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 141/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGELSEKITDAPNKD--LEKPYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|218231488|ref|YP_002369537.1| leucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229152938|ref|ZP_04281120.1| Leucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|226695100|sp|B7H798|SYL_BACC4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218159445|gb|ACK59437.1| leucine--tRNA ligase [Bacillus cereus B4264]
 gi|228630551|gb|EEK87198.1| Leucyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|42561235|ref|NP_975686.1| leucyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492733|emb|CAE77328.1| leucine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 810

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 3/186 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +K YI     YP+    H+GH       DV +RF R+ G DVL   G D  G    + 
Sbjct: 34  SEKKAYILDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  QN  NF+   + +  SYD    I T +  ++ T + ++K++  KG  
Sbjct: 94  ALKTGNDPREFTLQNIENFKIQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         +DE+ +            PV   +   +  +++ Y DKLL  
Sbjct: 154 ENRDIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWVLKITDYADKLLDG 213

Query: 180 YESHPE 185
            ++   
Sbjct: 214 LDNLDW 219



 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 43/234 (18%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL--------SANLPLPKKVFSHGFILHKGEKIS 304
            K+ P DL++ G++    H +Y   +            N P  +       +     K+S
Sbjct: 529 EKWLPVDLYIGGQEHAVGHLLYARFWTHFLYDLGLLPTNEPFKRLFNQGMILGPDNRKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +VI+  G DALR + +          +  DGL               ++R
Sbjct: 589 KSWGNVINPDDVIDTHGADALRLYEMFMGPLDASLPWSFDGLDAS---------LKWLNR 639

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              MI K              ++  +  V + V++++ + +Q    + A++Q++ LV+ +
Sbjct: 640 CYRMINK--------IEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNTAISQLMVLVNAI 691

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +               +  +TV    +E       +L  F P L+ ++++ L 
Sbjct: 692 YK---------------EELNTVYKPYIEGF---VKMLSLFAPHLSEELWEKLG 727


>gi|257066686|ref|YP_003152942.1| leucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798566|gb|ACV29221.1| leucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 800

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++  G D  G      
Sbjct: 30  NKKKFYPLVEFPYPSGQGLHVGHPRPYTALDVVARKRRLEGENVMYPMGWDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +      + N  +F++    +  S+  D  + TT+  ++   + ++ ++   G  
Sbjct: 90  AIKNKIHPAKVTEDNIAHFKEQMKSIGFSFDWDREVNTTDPDYYKWSQWIFIQMYKHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +    +    ++EV  G            V    +  +  +++ Y D+L+  
Sbjct: 150 YKNEMSVNWCPSCQVGLANEEVVDGK----CERCGTEVVHKMKNQWMLKITEYADRLIDD 205

Query: 180 Y 180
            
Sbjct: 206 L 206



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 117/358 (32%), Gaps = 63/358 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+                   +G   LS   
Sbjct: 413 FKLRDWVFSRQRYWGEPIPMIYCEEHGWVPVPEEELPVKLPDVPSYEPTATGESPLSEIE 472

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVI 263
           +  +    I   P       M  W  +   YL      +        +   + P D +  
Sbjct: 473 EFVNTTCPICGKPAKRETDTMPQWAGSSWYYLRYMDPNNKEAIASKEALDYYSPVDWYNG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    +K+SKS GNVI+P +
Sbjct: 533 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYKKRTSHGMILGSDHQKMSKSRGNVINPDD 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D LR + +          +  +G+  R        + NL    V         
Sbjct: 593 IVRDYGADTLRCYEMFMGDFSSMAIWSDEGV--RGCRKYLERVFNLTDLVV--------- 641

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E  + +  V ++ ++++ E+ +N   + A+A++++L++E            
Sbjct: 642 ------DGEEYSKDLEVVINQTIKKVSEDYENLKFNTAIAKLMTLLNE------------ 683

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
                     ++  +T +  +    LL    P +  ++++++    E     + S D+
Sbjct: 684 --------MKSLGKITKKDFKTYITLLNPVAPHMTEELWEMMSYEGELNQTTWPSYDE 733


>gi|326569896|gb|EGE19946.1| valyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 975

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 128/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEAGNIAKQTRQEFPDGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+      + G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLASTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASEQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++  + D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVWLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|327459525|gb|EGF05871.1| leucine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327490726|gb|EGF22507.1| leucine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 858

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 54  KDKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 230

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 231 DLEELDWPESIKDMQRNWI 249



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 103/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 512 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 571

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 572 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 631

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 632 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 683

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    TE+  ++  V    ++ + E ++    + A+A ++
Sbjct: 684 -KFLDRVYRLLN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAHLM 734

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 735 IFVNVANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 774

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 775 QTGESISYVTWPT 787


>gi|228923497|ref|ZP_04086779.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836135|gb|EEM81494.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQENGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSRLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|228941918|ref|ZP_04104462.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974849|ref|ZP_04135411.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981442|ref|ZP_04141740.1| Leucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778267|gb|EEM26536.1| Leucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784853|gb|EEM32870.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817751|gb|EEM63832.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942523|gb|AEA18419.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|229193026|ref|ZP_04319982.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590473|gb|EEK48336.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFLKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|206969627|ref|ZP_03230581.1| leucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229072245|ref|ZP_04205451.1| Leucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081997|ref|ZP_04214486.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229181058|ref|ZP_04308391.1| Leucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206735315|gb|EDZ52483.1| leucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602386|gb|EEK59874.1| Leucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228701296|gb|EEL53793.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710853|gb|EEL62822.1| Leucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|30022810|ref|NP_834441.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048442|ref|ZP_04194008.1| Leucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229112203|ref|ZP_04241743.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229130018|ref|ZP_04258982.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147309|ref|ZP_04275659.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|296505206|ref|YP_003666906.1| leucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|33301671|sp|Q816T0|SYL_BACCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29898369|gb|AAP11642.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228636141|gb|EEK92621.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653462|gb|EEL09336.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671187|gb|EEL26491.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228722903|gb|EEL74282.1| Leucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326258|gb|ADH09186.1| leucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEA 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|75763436|ref|ZP_00743161.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903260|ref|ZP_04067392.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967845|ref|ZP_04128857.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74489075|gb|EAO52566.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228791811|gb|EEM39401.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856361|gb|EEN00889.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/415 (13%), Positives = 140/415 (33%), Gaps = 62/415 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                                  +  E +     ++    P +  +++  L   +
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNE 724


>gi|326571496|gb|EGE21511.1| valyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 975

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 128/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPNGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+      + G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLASTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASGQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++ D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVRLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|42783928|ref|NP_981175.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206977281|ref|ZP_03238178.1| leucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962228|ref|YP_002340798.1| leucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098211|ref|YP_002532268.1| leucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141476|ref|ZP_04270012.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229198904|ref|ZP_04325595.1| Leucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|60390720|sp|Q72YY8|SYL_BACC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695249|sp|B7HSS7|SYL_BACC7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782484|sp|B9J1E1|SYL_BACCQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|42739858|gb|AAS43783.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206744432|gb|EDZ55842.1| leucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064989|gb|ACJ79239.1| leucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242269|gb|ACM14979.1| leucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228584607|gb|EEK42734.1| Leucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228641961|gb|EEK98256.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 142/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G     + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGEHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTDNIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|117928237|ref|YP_872788.1| isoleucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648700|gb|ABK52802.1| Isoleucyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 1048

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 120/401 (29%), Gaps = 16/401 (3%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
                  Y    +    L +E    +        G+Y +   N V W      ++     
Sbjct: 407 YYALPTWYIRTTAVKDKLLEENEKTNWFPETIKHGRYGDWLRNNVDWALSRNRYWGTPLP 466

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----YIM 228
                +    H   +        +     SGL           +   +          ++
Sbjct: 467 LWTCPAG---HVTCVGSRAELGNLAGQELSGLDPHRPYVDAVTFPCPVCGAEARRVPEVI 523

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W D+        GY         + +PAD      D     F+ +     L+      
Sbjct: 524 DGWYDSGAMPFAQFGYPFAGVDEFERSYPADFICEAIDQTRGWFYTLMAVGTLVFGRSSY 583

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              V     +   G K+SK LGN+++P+ ++E  G DALR+F++   +         D L
Sbjct: 584 RNVVCLGHILAEDGRKMSKHLGNILEPMPLMERHGADALRWFMLASGSPWVPRRVGHDAL 643

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIREN 404
            + V   L           +      +    P P   T    D   LS       E+   
Sbjct: 644 DEVVRKVLLTYWNTASFFVLYANASGWTPSDPAPPVETRPLLDRWALSRVHATTAEVDNA 703

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           +++     A  ++  L+ ++  ++  +      + +    +T      E +  L  LL  
Sbjct: 704 LESFDSAGAGRRLSELIDDLSNWYVRRSRRRFWEGDAAALAT----LYECLEVLTRLLAP 759

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           FVP + + +   L          S+  R  P        DP
Sbjct: 760 FVPFITDYVHSCLVTEMVPSAPDSVHLREWPAAD-PARIDP 799



 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 23/164 (14%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            R +          N  P  H  H    +  D+  RF  + G  V    G D HG  +  
Sbjct: 42  GRPQWTFYEGPPTANGTPGTH--HVEARVFKDLFPRFKTMKGFHVPRKAGWDCHGLPVEL 99

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
             +                       +  V+++   F  + + +   +       T +  
Sbjct: 100 QVERELGFSGKQDIETYGIAEFNAKCRESVERHVDAFERLTERMGYWVDMSQAYWTMDPT 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           + D+     KKI D G + +      Y  R     +D EV +G 
Sbjct: 160 YIDSVWWSLKKIFDAGLLVRDHRVAPYCPRCGTPLSDHEVAQGY 203


>gi|321251339|ref|XP_003192031.1| isoleucine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458499|gb|ADV20244.1| Isoleucine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1094

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 100/264 (37%), Gaps = 12/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +     + Y         K +PAD    G D     F+ +      L  
Sbjct: 536 EEVFDCWFESGSMPYAQSHYPFENVERFQKSYPADFISEGIDQTRGWFYTLLVLGTHLFE 595

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
             P    + +   +   G+K+SK L N  DP+EV+ + G D +R FLV       D   +
Sbjct: 596 TAPWKNLIVTGLVLAADGKKMSKKLKNYPDPMEVVNKYGADCVRLFLVNSPVVRADNLRF 655

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMIL-------KDYDGMIPTPGAFTESDESILSVC 394
            ++G+++ +   +     N ++  +  +        + +        +    D  IL+ C
Sbjct: 656 REEGVREILTNVIL-KWINSLNFYLGQVELFEQTTGEKFVYDHNAKKSTNVMDRWILATC 714

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++Q +   M    ++  + +++ L+S++ + Y    +         +     L    E
Sbjct: 715 QTLIQHVETEMAAYRLYTVIPKLLDLISDLTNWYIRFNRTRLKGSGGVEDTRAALNTLYE 774

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L + + +F P     ++  L
Sbjct: 775 ALLTLCLTMSSFTPFTCETVYQAL 798



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +   +PH GH     I D++ R     G  V    G D HG  +   
Sbjct: 39  EGKPEYSFFDGPPFATGKPHYGHLLAGTIKDIVTRHAHSTGHHVERRFGWDTHGLPVEHE 98

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++   + +   I ++   +T +   
Sbjct: 99  IDKTLNIKGKEDVMAMGIDKYNAACRDIVMRYSNEWKSTVERMGRWIDFETGYKTLDPTF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++ ++  K  +Y+G     YS       ++ E
Sbjct: 159 MESVWWVFGQLWKKDQVYRGLRVMPYSTGCTTPLSNFE 196


>gi|325697851|gb|EGD39735.1| leucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 861

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 57  KAKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 116

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 117 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 176

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 177 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 233

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 234 DLEELDWPESIKDMQRNWI 252



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 103/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 515 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 574

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 575 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 634

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 635 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 686

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +        + +     E+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 687 -KFLDRVYRL--------MTSKEIVAENSGALDKVYHETVKSVTEQIEEFKFNTAIAQLM 737

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 738 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 777

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 778 QTGESISYVTWPT 790


>gi|254671995|emb|CBA04475.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 837

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+ + H+GH     I DVL+RF  L+G +V+   G D  G     AA    V    
Sbjct: 1   MFPYPSGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAA 60

Query: 72  FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   N    +     L   I +     T +  ++   + L+ K+ +KG +Y+   +  + 
Sbjct: 61  WTYDNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D+    +++V  G            ++  E   Y+F+++ Y ++LL+  +    +   
Sbjct: 121 PVDQTVLANEQVIDG----RGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQ 176

Query: 190 IERRNEVISFVKSGLKDL 207
           ++           G+   
Sbjct: 177 VKTMQRNWIGKSRGMTVR 194



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 123/360 (34%), Gaps = 48/360 (13%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                G           +ME   YFFR   Y     S     P         ++ I  ++
Sbjct: 451 CPCCGGAAKRETDTMDTFMESSWYFFR---YMSPKFSDGMVDPAAAKYWGAVDQYIGGIE 507

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-KFW--P 257
             +  L  +R    +  K+  D   + +    + L             +  K  K W  P
Sbjct: 508 HAILHLLYAR----FFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINP 563

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           AD+ +   D  R  +    A  L         V S        EK+SKS  N +DP E+I
Sbjct: 564 ADVELTFDDKGRPISAVLKADGLP-------VVISGT------EKMSKSKNNGVDPQELI 610

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D  R F++      +   +   G++       A+     + R+V   LK  + + 
Sbjct: 611 NAYGADTARLFMMFAAPPEQSLEWSDSGVEG------AHRFLRRLWRTVYEYLKQGEAVK 664

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKP 433
              G+    ++  + +         ++ ++  + Q  + A+A V+ L+++ D+       
Sbjct: 665 AFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDK------- 717

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQR 492
                T  ++   V     EV+     LL   VP +   ++  L  A      + ++D+ 
Sbjct: 718 ---TDTGGEQGRAV---AQEVLETAVRLLWPIVPHICETLWSELNGAKLWEAGWPTVDEA 771


>gi|228955020|ref|ZP_04117036.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804646|gb|EEM51249.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPREYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|154288993|ref|XP_001545195.1| hypothetical protein BC1G_16290 [Botryotinia fuckeliana B05.10]
 gi|150851864|gb|EDN27056.1| hypothetical protein BC1G_16290 [Botryotinia fuckeliana B05.10]
          Length = 457

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 106/311 (34%), Gaps = 48/311 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            K+  D   ++  W  +      T G+         K +P  +   G DIL F    +  
Sbjct: 41  FKLKRDED-VLDTWFSSGLWPFATMGWPKKTS-DFEKLYPTSVLETGWDILFFWVARMIM 98

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE----------------- 318
               ++  +P  +           G K+SKSLGNVIDP +VI+                 
Sbjct: 99  FGIKMTGKVPFTEVYCHSLVRDSDGRKMSKSLGNVIDPQDVIQGIALEDLHAKLLVGNLA 158

Query: 319 --------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ LV     G D  +D   +         N I
Sbjct: 159 PAEVEKAKKYQKTAFPDGIPECGTDALRFALVSYTTGGGDIAFDIKVI--HGYRKFCNKI 216

Query: 359 GNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  V  +  D+  +      G  + S+  IL   +   +EI +N++++   R+ A 
Sbjct: 217 YQATKYVVGKLPADFVPNKTAKLTGKESLSERWILHKMTMAAKEINQNLEDREFMRSTAA 276

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V         D Y +  K      T+ ++ S         +     ++  ++P L  +++
Sbjct: 277 VYQYWYNQLCDVYIENSKAILQDGTDEEKRSATD-TLYTALEGALTMIHPYMPFLTEELW 335

Query: 475 DILFVADENRC 485
             L    E++ 
Sbjct: 336 QRLPRRPEDKT 346


>gi|324328635|gb|ADY23895.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G     + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGPHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTDNIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|282917018|ref|ZP_06324776.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319505|gb|EFB49857.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 408

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL+ 
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVIDG----VSERGGHPVYRKPMKQWVLKITEYADQLLAD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESLKDMQRNWIGRSE 226


>gi|228910590|ref|ZP_04074402.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849005|gb|EEM93847.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 802

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|150401370|ref|YP_001325136.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166229747|sp|A6UVK2|SYI_META3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150014073|gb|ABR56524.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 1040

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 139/387 (35%), Gaps = 33/387 (8%)

Query: 105 TCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           T +        K +I +         +  +  Y N  +     +         P+     
Sbjct: 422 TEQWFLNISKIKNNIVEHAKNTDWVPNWVETRYINGVKFVGDWNISRQRYWGIPLPIWIC 481

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E                        L  E  N++          +       D G ++  
Sbjct: 482 ENKDCGKYK---------IIGSVEELKQEMINDIPINDDLHKPTVDKIIMKCDCGCEMKR 532

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
            P  ++ VW D+      +    +           AD  V G D +   F++ +  + ++
Sbjct: 533 TPD-VLDVWYDSGLAPYASINAKELKK--------ADFIVEGNDQVTKWFYSQHALSEIV 583

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
             ++P  K +     +   GEK+SKS+GNV++P +V+EE G D LR++L+      +D  
Sbjct: 584 FDDIPYKKCMMHGFTLDETGEKMSKSIGNVVNPDDVVEEFGADLLRFYLLSANKAWEDLR 643

Query: 341 YDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
           +    +   K V   L N     V+    M+L D+           + D+ I+S  + + 
Sbjct: 644 FSIGEMNDVKSVFNTLWNSYSFAVN---YMVLDDFSPNEEYFNYLRDEDKWIISKINSLT 700

Query: 399 QEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEV 454
           +E  E ++   +H    +V   +       Y      + W ++K +PD+ S        V
Sbjct: 701 KEAIEVLEIPHLHEYTWKVRDFILNDLSRWYIKLIRNRTW-MEKEDPDKLSA-YQTLYYV 758

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           + +L ++L    P ++ KI+  L +  
Sbjct: 759 LMKLVVILAPVAPHISEKIYQNLKIEG 785



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +     Y      Y +   H+G A+   I D + RF R+   +VL   G D HG  I   
Sbjct: 35  ENYPDYYFVDGPPYCSGSIHLGTAWNKTIKDTVLRFKRMQNYNVLDKAGWDMHGLPIEVK 94

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            ++                       K F   N     +    L I   +++     +  
Sbjct: 95  VEHEFNLQSKKDIETKVGTDVFIEKCKEFALNNKEVMENQFKNLGIWLDWENAYLPIKND 154

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + +      K+  +K  + K    G++  R E    + EV
Sbjct: 155 YIEAGWWSLKRAHEKELLSKDLRVGYWCPRCETSLAEHEV 194


>gi|307709947|ref|ZP_07646394.1| leucyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619318|gb|EFN98447.1| leucyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 833

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEILAENNGALDKVYNETVKSVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|296189391|ref|XP_002742769.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 1389

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 68/460 (14%), Positives = 143/460 (31%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G   A+    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 438 VCPVDASGCFTAEVTHFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 490

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D +Y+  + V +   G +     +       
Sbjct: 491 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLSYWVPEFVREKRFGNWLKDARDWAISRNR 550

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D  +          L      ++    +  +  L++       G     
Sbjct: 551 YWGTPIPLWVSDDFMEVVCIGSMAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 607

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 608 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 667

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 668 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 727

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N     +   V +  ++    +       +S    D+ ILS
Sbjct: 728 RFKEEGVRDVLKDVLLPWYNAYRFFIQNIVRLQKEEEIEFLYNENTVRKSPNVTDQWILS 787

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +   T L   
Sbjct: 788 FMQSLIDFFATEMAAYRLYTVVPRLVKFVDTLTNWYVRMNRRRLKGENGVEDCVTALETL 847

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  ++P L   ++  L V  +    Q  D 
Sbjct: 848 FSVLLSLCRLMAPYMPFLTELMYQNLKVLIDPVSVQDKDT 887



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 125 KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 184

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T     
Sbjct: 185 IDKTLGIRGPEDVAKMGIAEYNSQCRAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPEF 244

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 245 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 288


>gi|325270953|ref|ZP_08137540.1| isoleucine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324986750|gb|EGC18746.1| isoleucine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 1221

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 109/308 (35%), Gaps = 40/308 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           +       ++ VW D+ +       Y    + +                           
Sbjct: 664 RPMYRETDLIDVWFDSGSMPYAQLHYPFEGEINAEGLKATGKTEAEYRRELVHSTYEGTA 723

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F+PAD    G D     F  ++  A ++  ++     + S   +  KG K+SK +G
Sbjct: 724 VPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLVLDAKGNKMSKHVG 783

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVS 367
           NV DP E++ + G D +R++++       +  +D +G+ +         + N  S  ++ 
Sbjct: 784 NVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFALY 842

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
             +  YD            E D  I+S  + +++ +   ++N    RA   + + V    
Sbjct: 843 ANVDGYDAATCEAVKAGAPEIDRWIISKLNSLIKGVTHELENFDPTRAGRLIDAFVNNDL 902

Query: 424 VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y   + ++ W   K       +        +  +A LL  F P  A++++  L    
Sbjct: 903 SNWYVRLNRKRFW--GKEMSADKKSAYDTLYTSLMTVARLLAPFAPFYADQLYKDLGGEL 960

Query: 482 ENRCFQSL 489
           E+      
Sbjct: 961 ESIHLDRW 968



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           +   +          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGNPQFIFFEGPPSANGHPGIHHVLARSIKDAFNRYKTMQGFQVRRKAGWDTHGLPVELG 97

Query: 60  --------KAAQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR--T 97
                   K   +   + K              V + +  ++ + + +    D      T
Sbjct: 98  VEKELGITKKDIDNHASPKYISTEDYNHKCRENVMKFTAEWKQLTEEMGYFVDMEHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|325968455|ref|YP_004244647.1| aminoacyl-tRNA synthetase class Ia [Vulcanisaeta moutnovskia
           768-28]
 gi|323707658|gb|ADY01145.1| aminoacyl-tRNA synthetase class Ia [Vulcanisaeta moutnovskia
           768-28]
          Length = 892

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 75/388 (19%), Positives = 133/388 (34%), Gaps = 58/388 (14%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P++ +  + YF +   ++D  L     +   I P E    +I ++KS   D 
Sbjct: 424 PICWRCKTPIEIIVTKEYFLKQLPFKD-ELIKLVKNEMVIKPPEYAQTLIDWIKSLEFDW 482

Query: 208 SLSRKTFDWG-IKIPD----------------------------------------DPQY 226
            +SR+ +    I I                                              
Sbjct: 483 PISRRRYYGTEIPIWYCIDEEGNAKPIVPKPGKYYRPWRDEPPPEVKEQCPSGKLVGEDR 542

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W D+  +++  TGY      +  K +P   L   G DI+R    Y    A+LL   
Sbjct: 543 VLDTWFDSSISWIYATGYTKPEIRAFEKVYPHSILRPQGYDIIRTWLYYSVVRAYLLYGK 602

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P      S   +  +GE + KS GN+IDPI  +E+ G DA R++       G D  Y +
Sbjct: 603 PPFKYVRISGMGLDERGEAMHKSKGNIIDPIPPVEKYGADATRFWAAASAKLGSDYRYSE 662

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +  R   D A  + N+     S    + D         T  D  IL+  + V++    
Sbjct: 663 QLI--RTGHDFAIKLWNIARFVSSFPEVNDDY------ELTSLDLMILAKLNDVIKTSLN 714

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQL 458
                 ++     +   +     D Y +A K     +       +     Y    V++ +
Sbjct: 715 AYSEFDVYVPANILYDFMWHVFADHYLEAVKSRAYNRDGLFTEKQQRGAWYTLYRVLKTV 774

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF 486
             LL   +P + ++I+  L+    +R  
Sbjct: 775 LKLLAPIMPFVTDQIWRSLYGGSIHRQL 802



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 14/176 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  L I T   YP+ +PHIG        D++ARF R+ G +V+F    D +G  +   
Sbjct: 118 EKKPTLVIDTPPPYPSGRPHIGGIAHYAQIDMIARFFRMRGYNVIFPFYADRNGLPVEVQ 177

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCR 107
            +                   K F+D+    F  +      S++ +   T  + +    +
Sbjct: 178 VERTYGINMYEVPRERFLELCKRFLDEYEGEFVTIFRRWGGSFNYWRNGTDSEEYRRVTQ 237

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             +  + +KG IY+      +  R      + EV    +  Y N     V+   E+
Sbjct: 238 ETFINLWNKGLIYETSRPTLWCPRCRTALAEAEVEYKDEDTYLNYVKFRVRETSED 293


>gi|145603153|ref|XP_361951.2| hypothetical protein MGG_04396 [Magnaporthe oryzae 70-15]
 gi|145011453|gb|EDJ96109.1| hypothetical protein MGG_04396 [Magnaporthe oryzae 70-15]
          Length = 1099

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 118/359 (32%), Gaps = 50/359 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y +  E        N      K+  +    ++K            
Sbjct: 554 WCISRQLWWGHQCPVYYAEIEGDENDRGANNRWFAGKTEQEAEEKAKKALGEKKFKLVRD 613

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+ +       K +P      G DIL F    +      L+ 
Sbjct: 614 DDVLDTWFSSGLWPFSTLGWPNTSAEDLQKLYPTSTLETGWDILTFWIARMIMLGMKLTG 673

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P   +V+ H  +    G K+SKSLGNVIDP++VI                        
Sbjct: 674 KVPF-NEVYCHSLVRDSDGRKMSKSLGNVIDPLDVIKGINLDDLHAKLLVGNLASTEVEK 732

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR+ ++     G D  +D            +N I      
Sbjct: 733 ATKYQKQAFPQGIPECGADALRFCMINYTTSGGDINFDIK--VMHAFRRFSNKIWQASKY 790

Query: 365 SVSMILKDYDGMIPTP----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            +  +    D +        G+ + +++ IL   ++  + I E +Q +   ++   V + 
Sbjct: 791 VLGKLENYPDFVPREKRTLGGSESLAEQWILHKMNQATKGINEALQEREFMKSSQLVYAY 850

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 D + +  K   L+  +P    + +      +    +L+  F+P +  +++  L
Sbjct: 851 WYNQLCDVFIENSKA-LLQDGSPAEQESAMQTLYTALESALVLIHPFMPFVTEELWQRL 908



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 45/150 (30%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           H+GHA    + D++ R+ R+ G   L+  G D  G     
Sbjct: 167 VKDEGSFVIVHPPPNVTGALHMGHALGDSLQDLMIRYERMRGKTTLWVPGCDHAGIATQT 226

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         +  +      +    +  S+D      T ++ 
Sbjct: 227 VVEKMLWKSEQKTRHDLGRPDFISKVWEWKGEYHEKINNALRKMGGSFDWSREAFTMDEN 286

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   + ++ ++G IY+      +  +
Sbjct: 287 STAAVMEAFVRLHEEGIIYRANRLVNWCTQ 316


>gi|124802025|ref|XP_001347338.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23494916|gb|AAN35251.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 749

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 83/245 (33%), Positives = 137/245 (55%), Gaps = 8/245 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLD-----VLFTTGTDEHGQKIAKA 61
           L IST + Y N +PHIGHAY  I+ DVL ++ +L G++     ++F +G DEHG KI K 
Sbjct: 144 LLISTPVYYSNDRPHIGHAYCNILCDVLYKYEKLKGVEKKKKGIIFFSGMDEHGLKIEKK 203

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                +    ++D  S  ++DM   L +  + F RT+   H    + +WK +     IYK
Sbjct: 204 CNKNKMKIIEYIDDISNYYKDMNKKLSVDVNLFYRTSYSFHKMFVQNVWKYLVHNNYIYK 263

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             Y G+Y++ +E Y ++ E+    +G+Y     N +   EE  YFF +  ++D L+ +YE
Sbjct: 264 DTYKGYYNINEERYISEQEL---REGKYKIDNENIIYVEEENSYFFNILKFKDYLIDFYE 320

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT 241
            +  FI P   R +VI  +K+ L+++ +SR    W I+IP++ +  +YVW DAL +Y+++
Sbjct: 321 KNENFIYPPYLRKQVIYTLKNELRNICISRYNTKWAIQIPNEAEGTIYVWFDALLSYVSS 380

Query: 242 TGYLD 246
             YL 
Sbjct: 381 MLYLH 385



 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 6/243 (2%)

Query: 254 KFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           KFW   + VIGKDIL FHAI +   L S NL LP+K+  HG I ++  K+SKSL NV++P
Sbjct: 496 KFWNPFIQVIGKDILNFHAILYICLLKSLNLELPQKILCHGLIKNENIKMSKSLNNVVNP 555

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++++   D LR + +   +  +D  Y +  + +     L N +GNL+ R VS+ +++ 
Sbjct: 556 FDLLKKYNPDVLRLYFMGCGSIYEDKNYKEQNI-ESFELFLRNNVGNLLYRVVSLCIENN 614

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQ-EIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
             M+P           IL+     ++ ++   + N    + L  +++L+  V+++F    
Sbjct: 615 YNMVPVIKTNDYDSNIILNEWKDNIKNKLIPYLDNMEYIQFLELIMTLIKNVNKFFVHNT 674

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---VADENRCFQSL 489
           PW  KK +     T +YVT+E ++  +IL+  F+P ++  I   +    + +EN     L
Sbjct: 675 PWNYKK-DTQHFHTTIYVTLECMKYFSILMFPFIPNISLAILRNIGFDDIDEENISLDML 733

Query: 490 DQR 492
           + R
Sbjct: 734 ETR 736


>gi|113955156|ref|YP_730582.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132569|sp|Q0IAE0|SYL_SYNS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113882507|gb|ABI47465.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 867

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 46  GQRAFYALSMFPYPSGTLHMGHVRNYVITDVIARVQRMRGDAVLHPMGWDAFGLPAENAA 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
               +   V+ D N    R     L   I +D  + T    ++   + L+ ++   G  Y
Sbjct: 106 IERKIEPGVWTDSNIAQMRGQLGRLGLSIDWDREVATCHSDYYRWTQWLFLELHAGGLAY 165

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V   ADG+ + +    V+  +   +F R++ Y D LL   
Sbjct: 166 QKDATVNWDPVDQTVLANEQV--DADGRSWRSGA-LVEKRDLRQWFLRITDYADALLDDL 222

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +    +   +            G
Sbjct: 223 DQLQGWPERVRTMQANWIGRSIG 245



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 26/193 (13%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++         G  
Sbjct: 629 FEKMSKSKHNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVE---------GQF 679

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
             + R   ++  + +    +P A  ESD  I     + ++ + E++  +   + A+++++
Sbjct: 680 RFLQRLWRLVDSEVNHDGVSP-ATGESDSDIRRAVHQAIKAVSEDLSDDFQFNTAISELM 738

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L + +                   A     V  E +  L  LL  F P LA + +  L 
Sbjct: 739 KLSNSLS---------------SGLAQASPGVRQEAMSALVRLLAPFAPHLAEEFWQRLG 783

Query: 479 VADENRCFQSLDQ 491
             D   C    D 
Sbjct: 784 GEDSVHCQPWPDH 796


>gi|227499835|ref|ZP_03929928.1| leucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217944|gb|EEI83217.1| leucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 800

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++  G D  G     
Sbjct: 29  KNKKKFYPLVEFPYPSGQGLHVGHPRPYTALDVVARKRRLEGENVMYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +      + N +NF+     +  S+  D  + TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNKIHPAKVTEDNIKNFKAQMKSIGFSFDWDREVNTTDPDYYKWSQWIFIQMYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   S  +    +    ++EV  G            V    +  +  +++AY D+L+ 
Sbjct: 149 AYKNEMSVNWCPSCQVGLANEEVVDGK----CERCGTEVVHKMKNQWMLKITAYADRLID 204

Query: 179 YY 180
             
Sbjct: 205 DL 206



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 118/358 (32%), Gaps = 63/358 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   LS   
Sbjct: 413 FKLRDWVFSRQRYWGEPIPMIYCEEHGWVPVPESELPVKLPEVESYEPTATGESPLSEIE 472

Query: 212 KTFDWGIKIPDD----PQYIMYVWIDALTNY--LTTTGYLDNPDGSKAKFW--PADLHVI 263
           +  +    I           M  W  +   Y         +     +A  +  P D +  
Sbjct: 473 EFVNTTCPICGKASKRETDTMPQWAGSSWYYLRYMDPHNNEAIASDEALNYFSPVDWYNG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    +K+SKS GNVI+P +
Sbjct: 533 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYKKRTSHGMILGSDHQKMSKSRGNVINPDD 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I + G D LR + +          +  +G++         G    + R     LKD   
Sbjct: 593 IIRDYGADTLRCYEMFMGDFSSMAIWSDEGVR---------GCRKYLERV--FNLKDL-- 639

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                G   E  + +  + ++ ++++ E+ +N   +  +AQ+++L++E            
Sbjct: 640 ----VGEGEEHSKDLEVLINQTIKKVSEDYENLKFNTGIAQLMTLLNE------------ 683

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
                         +T +  +   ILL    P +  ++++++    E     + S D+
Sbjct: 684 --------MKAKGSITRKDFKTYIILLNPVAPHITEELWEMMGYEGELNQTSWPSYDE 733


>gi|325478520|gb|EGC81632.1| leucine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 800

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++  G D  G     
Sbjct: 29  KNKKKFYPLVEFPYPSGQGLHVGHPRPYTALDVVARKRRLEGENVMYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +      + N +NF+     +  S+  D  I TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNKIHPAKVTEDNIKNFKAQMKSIGFSFDWDREINTTDPDYYKWSQWIFIQMYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK   S  +    +    ++EV  G            V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKNEMSVNWCPSCQVGLANEEVVDGK----CERCGTEVVHKMKNQWMLKITEYADRLID 204

Query: 179 YY 180
             
Sbjct: 205 DL 206



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 121/358 (33%), Gaps = 63/358 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P++           E      +G   LS   
Sbjct: 413 FKLRDWVFSRQRYWGEPIPMIYCEEHGWVPVDESELPVKLPEVESYEPTATGESPLSEID 472

Query: 212 KTFDWGIKIPDD----PQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVI 263
           +  +    I           M  W  +   YL      +        +   + P D +  
Sbjct: 473 EFVNTTCPICGKSAKRETDTMPQWAGSSWYYLRYMDPANKDAIASKEALDYYSPVDWYNG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    +K+SKS GNVI+P +
Sbjct: 533 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYKKRTSHGMILGSDHQKMSKSRGNVINPDD 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I + G D LR + +          +  +G+  R        + NL     + I+++ D 
Sbjct: 593 IIRDYGADTLRCYEMFMGDFSSMAIWSDEGV--RGCRKYLERVFNL-----NEIVENGDS 645

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                       + +  V ++ ++++ E+ +N   + A+AQ+++L++E+           
Sbjct: 646 YS----------KDLEVVINQTIKKVSEDYENLKFNTAIAQLMTLLNEM----------- 684

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
             K    R            +   ILL    P +  ++++++    E     + S D+
Sbjct: 685 KAKGKITRKD---------FKTYLILLNPVAPHMTEELWEMMEFDGELNQTNWPSYDE 733


>gi|296417262|ref|XP_002838277.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634205|emb|CAZ82468.1| unnamed protein product [Tuber melanosporum]
          Length = 838

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 5/171 (2%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+   H+GH     I+DVLARF R+ G  V+   G D  G     AA   GV+ K 
Sbjct: 1   MFPYPSGVLHMGHLRVYTISDVLARFQRMRGKRVIHPMGWDAFGLPAENAAIEGGVSAKK 60

Query: 72  FVDQNSRNFRDMA--DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           + ++N  + ++      +   +D  IRT    ++   + L+ K+ + G  Y+      + 
Sbjct: 61  WTEKNIDSMKEQFSLMNVGFDWDREIRTCSPDYYVHTQRLFLKLYEHGLAYRKESQVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
             DE    +++V    D          V+      +FF+++AY+  LL   
Sbjct: 121 PVDETVLANEQV---LDNGKSWRSGAVVERRTLPQWFFKITAYKKALLEDL 168



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 85/255 (33%), Gaps = 54/255 (21%)

Query: 257 PADLHVIGKDILRFHAIY-------------WP--AFLLSANLPLPKKVFSHGFILHKG- 300
           P D ++ G +    H +Y             WP  +   +   P  K++ + G +   G 
Sbjct: 498 PVDAYIGGIEHAILHLLYARFISKFLRKIGMWPLGSDSENQGEPF-KRLVTQGMVSADGA 556

Query: 301 ------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                 EK+SKS  N  DP E I   G DA R  L+       +  +D+D +        
Sbjct: 557 SPRVSWEKMSKSKFNGTDPRECISRWGADATRAHLLFLGPVQAELRWDEDRIIGMHR--- 613

Query: 355 ANGIGNLVSRSVSMILKDY-DGMIP----------TPGAFTESDESILSVCSRVLQEIRE 403
                + + R  SM+ +   D   P          T  +    D  + S+     +    
Sbjct: 614 ---WFDKLWRHTSMLAEKLADPGFPILPNLIARPVTTTSIPPEDHDLFSMLQETNRNSSF 670

Query: 404 NMQNQLIHRALAQVI-SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +   L   AL  V+ +L+   +       P       P      L +T  V  +L  +L
Sbjct: 671 ALSKTL---ALNTVVSNLIKLTN---TLTSP-------PAETQPTLAMTYRVTNELLRML 717

Query: 463 QAFVPKLANKIFDIL 477
               P  A + +  L
Sbjct: 718 APIAPGFAEECWARL 732


>gi|182439222|ref|YP_001826941.1| isoleucyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178467738|dbj|BAG22258.1| putative isoleucyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 1047

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 138/412 (33%), Gaps = 14/412 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +       +G++ +  +N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAIKDRLLQENEKTNWFPDSVKNGRFGDWLNNNVDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         +D  L+   S  E      R    +   +  + +++ +    +  
Sbjct: 455 SRNRYWGTPLPIWRCEDGHLTCVGSRAELTELTGRDQSSLDPHRPFIDEVTFTCTHQNCQ 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 LEAYRVPE-VIDAWYDSGSMPFAQWGYPYQNKEVFENRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P   T  D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSGADPAPADRTVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++ ++   M+     RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LNALVDQMTVAMEGYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           V+  +  L+   VP +  +++  L         +S+     P   L    DP
Sbjct: 750 VVETVTRLMAPLVPFITERVWQDLVAPVTPDAPESVHLSTWPKADLSA-VDP 800



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMQGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAFGIAEFNAKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I +K  + +      +  R     +D E+ +G +
Sbjct: 160 VDSVWWSLKEIFNKDLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|326563766|gb|EGE14017.1| valyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 975

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 128/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPDGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+      + G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLASTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASEQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++  + D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVWLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|257464108|ref|ZP_05628491.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061625|ref|ZP_07926110.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 931

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           +         Q       PV + EE G         + ++++ E        +    E+I
Sbjct: 452 ETRPDWCISRQRIWGVPIPVFYKEETGEEIFNQDILNHVIAFVEKEGSDAWLLHTPEELI 511

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                    L         G+ +  +   IM VW D+ +++             +   WP
Sbjct: 512 GEENLKKYHLE--------GVSLRKETN-IMDVWFDSGSSHRAVLE------TWEGLHWP 556

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F      +       P  K +        KGEK+SKS GNV+ P +
Sbjct: 557 ADLYLEGSDQHRGWFQTSLLTSVGSRGTAPFKKILTHGFVNDGKGEKMSKSKGNVVAPEK 616

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I++ G D LR +    +   +D     + +K+             V  +   IL +  G
Sbjct: 617 IIKQYGADILRLWCA-SVDYREDVKISDNIVKQMAET------YRRVRNTARYILGNSYG 669

Query: 376 MIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
             P   A       E D+  L     + + + E+ +    +    ++     +     Y 
Sbjct: 670 FDPKKDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYL 729

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K     +K +     +   V +E++  L  ++   +   A +I++ L
Sbjct: 730 DIIKDRLYTEKEDSLARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHL 779



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   +     Y N   HIGHA   I+ D++ ++  L G    +  G D HG  I   
Sbjct: 46  KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTC 106
                 +        +  +  ++     +DI  ++FIR            T + +     
Sbjct: 106 VMEKLGSKAKDMTALEIRKLCKEYALRWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQ 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++ ++   G I+KG    ++S   E    + E+   
Sbjct: 166 LQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH 203


>gi|254994884|ref|ZP_05277074.1| leucyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
          Length = 824

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA +  V
Sbjct: 29  YVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYRV 88

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              V+ ++N  + R     + ISY  D  I T ++ ++   +  +     +G  Y+    
Sbjct: 89  NPAVWTERNIESMRKQLKSIGISYNWDREIATCKEDYYKHEQAFFLDFLQQGLAYRKESW 148

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V  G            ++  +   +F +++ + D LL   ++   
Sbjct: 149 VNWDPVDNTVLANEQVVDG----RGWRSGAKIERRKLSQWFLKITDFADSLLDGLKTLDG 204

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 205 WPEKVKLMQERWIGKTEG 222



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 142/442 (32%), Gaps = 74/442 (16%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHNPVQW 159
           D  ++++     + D+ K  YSG  + R+  + N   V    +              V  
Sbjct: 341 DIYQVVFPDDGVQYDLQKEAYSGDGTYRNSEFLNGLRVDAARNAMIQKLESMGGCRRVTN 400

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
                +      Y    +         I+P++R++  IS  +        +       W 
Sbjct: 401 YRLHDWGISRQRYWGCPIPVVHCEKCGIVPVDRQDLPISLPEEVDFSRGGNPLDHHPTWK 460

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILR 269
                  Q       D    +  ++ Y       +         K  P D ++ G +   
Sbjct: 461 HVQCPKCQSSAQRETDTFDTFFESSWYFAAFCSEQGGINAADCNKLLPVDYYIGGVEHAV 520

Query: 270 FHAIYWP--------AFLLSANLPLPKKVFSHGFI------------------------- 296
            H +Y             L+   P    +                               
Sbjct: 521 LHLLYARFFCRALKKCGHLAVEEPFRNLITQGMVCHSVYRDAAGNYLFPEDAQRMIRDGE 580

Query: 297 ---LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                K EK+SKS  NV+DP  +I++ G D +R F++ +    +D  +   G++      
Sbjct: 581 AVQRGKVEKMSKSKKNVVDPSHIIKKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWR-- 638

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               +  L   + S I  D+D            D   LS   ++L+ +  +M++  ++ A
Sbjct: 639 YLERLWRLFEDNSS-IGADFDT-----ADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 692

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+   + + V   F+  K                 V  E +  L  +++ F+P +A K+
Sbjct: 693 VAKFREMSNTV---FEMVK-----------CGVSQQVINESVCILLRVMEPFIPHIAEKL 738

Query: 474 FDILFVADE--NRCFQSLDQRL 493
           ++ +       NR + S  + L
Sbjct: 739 WERIGGEGMLCNRQWPSAREDL 760


>gi|161751094|ref|NP_377157.2| valyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|90108445|sp|Q972A3|SYV_SULTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 809

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 130/338 (38%), Gaps = 23/338 (6%)

Query: 158 QWMEEEGYFFRLSAYQDK--LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            W++   + + +S  +     L ++      ++P    +  +   K+         K   
Sbjct: 404 DWIKSLEWDWNISRQRVYGTPLPFWYCDNNHLIPAREEDLPLDPTKTKPPY----EKCPQ 459

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G+ +      +  VWID+    +              K +PA + + G DI+R    Y 
Sbjct: 460 CGLPLKPVTD-VADVWIDSSVT-VIYLTGFYTDKRKFEKTFPASVRLQGTDIIRTWLFYT 517

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +   +L+ N+P  + + +   +   G ++SKS GNV++P++ ++E G D++R  L+ + 
Sbjct: 518 FFRTLVLTGNIPFKEVLINGQVLGPDGTRMSKSKGNVVNPLDKVDEFGADSIRLTLL-DA 576

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
             G D  +  + +  R    L   + N    S   I K        P      D  IL  
Sbjct: 577 RIGDDFPFKWETV--RGKKLLLQKLWNAGRLSYPFIGKK---KFDRPSNLHPIDRWILQE 631

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             R +++  E   N   ++ +  + S   E   D Y +  K     +       + LY  
Sbjct: 632 HKRFVKKSIEAYNNYDFYQVVESLYSYFWETIADEYLELIKHRLFAED-----LSALYTL 686

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             V + L I+L    P +  ++++ L+    +   + L
Sbjct: 687 SRVFKDLLIILHPIAPHITEEMYNRLYGDKISIILEGL 724



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++     I T   + + + H+GHAY + IAD + RF RL G +VL   G D  G      
Sbjct: 48  EKSPVFVIDTPPPFTSGELHMGHAYWVTIADTIGRFKRLQGYNVLLPQGWDTQGLPTELK 107

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCR 107
            Q      K            + +   +  ++    L     ++ +  RT E  +    +
Sbjct: 108 VQYRLKIPKENRELFLKKCVEWTEDMIKKMKEAMIRLGYRPEWERYEYRTYENSYRKIIQ 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++   G I       ++  + E      EV  
Sbjct: 168 KSLLEMYKLGLIEIREGPVYWCPKCETALAQSEVGY 203


>gi|326564362|gb|EGE14590.1| valyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 975

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 128/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPDGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+      + G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLASTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASEQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++  + D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVWLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|301120103|ref|XP_002907779.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262106291|gb|EEY64343.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1052

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 71/409 (17%), Positives = 126/409 (30%), Gaps = 69/409 (16%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           + + N D++ K A     N +   V     E  +FR            +      +P   
Sbjct: 463 QWFVNCDQMAKDAMAAVTNKELKIV-PESHEKTWFRWLENIRDWCISRQLWWGHRIPAYF 521

Query: 193 -----------RNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYIMYVWIDAL 235
                        E              +RK     + + +D       + ++  W+ A 
Sbjct: 522 ARVKDEAFVDKNAEDAGGRWFAGISEEDARKKAATKLDVSEDKIELEQDEDVLDTWVSAG 581

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
                  G+ +  D     F+P DL   G DIL F    + +    L+  LP        
Sbjct: 582 LFPFAVFGWPNKTD-DFENFFPTDLLETGYDILFFWVARMVFMGQKLTGKLPFKTIYLHS 640

Query: 294 GFILHKGEKISKSLGNVIDPIEVI------------------------------------ 317
                 G K+SKSLGNV+DP+E+I                                    
Sbjct: 641 MVRDKYGRKMSKSLGNVVDPLEIIAGCTLEDLFKKLESGNLPAKEVEKAKKGQKLDFPQG 700

Query: 318 -EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI------L 370
             E G DALR+ L+     G+D   D   L      +  N + N V  ++S +       
Sbjct: 701 IPECGADALRFGLLAYTQQGRDINLDIGRLVG--YRNFCNKLWNAVRFAMSNLEGGFSAA 758

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
           ++    +      +  D  ILS  +  ++   ++            + +       D Y 
Sbjct: 759 ENVADTVLANAVVSSRDCYILSRLNHAIKVCNDSFAAYEFGELTNALYNFWLYDLCDVYL 818

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  KP  +   + +   T        +     LL   +P +  +++  L
Sbjct: 819 ELTKP-VINGEDAEAKLTAQQTLYVCLEFGLRLLHPSMPFVTEELWQRL 866



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E+  +           H+GHA  + I D L R+HR+ G   L+  GTD  G      
Sbjct: 117 KPDERFVMVIPPPNVTGSLHLGHALTVAIQDALTRWHRMLGHATLWVPGTDHAGIATQSV 176

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRH 102
            +   +                     + +Q           +  S D      + +   
Sbjct: 177 VEKRLLKEEGKSRHHLGREKFLERVWDWKNQYESRIHHQFRSVGCSVDWERQYFSMDDNC 236

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               R  + ++ ++G IY+      +S + +   ++ EV  
Sbjct: 237 SRAVRHAFCQLWEEGLIYRATRMINWSCKLKTALSEIEVDY 277


>gi|239626786|ref|ZP_04669817.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516932|gb|EEQ56798.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 1044

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 90/268 (33%), Gaps = 5/268 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+         Y           +PA       D     F+++   + LL    
Sbjct: 517 VIDCWFDSGAMPFAQHHYPFENKELFESQFPAQFISEAVDQTRGWFYSLLAESTLLFNKA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V     +   G+K+SKS GN +DP + +   G DA+R+F     A      Y   
Sbjct: 577 PYENVVVMGLVLDENGQKMSKSKGNAVDPFDTLAAHGADAIRWFFYTCSAPWLPKRYQDK 636

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
            + +     +           +   + ++D    T         D+ +LS  + +++ + 
Sbjct: 637 AVTEGQRKFMGTLWNTYAFWVLYANIDNFDATKHTLEYDKLPVMDKWLLSKMNSMVKCVD 696

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +N+ N  I  A   +   V ++ + Y    +     K                +  +A  
Sbjct: 697 DNLMNYQIPEAARSLQEFVDDMSNWYVRRSRERFWAKGMEQDKVNAYMTLYTALVTVAKA 756

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSL 489
               +P +  +I+  +    +    +S+
Sbjct: 757 AAPMIPFMTEQIYQNIVRKIDADAPESV 784



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 20/190 (10%)

Query: 1   MKEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  K Y+        N +PHIGH    +I D++ R+  + G  V    G D HG  + 
Sbjct: 34  MREGCKPYVFYDGPPTANGKPHIGHVETRVIKDMIPRYRAMKGYMVPRKAGWDTHGLPVE 93

Query: 60  KAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEK 100
              +                       K  V +    + D ++ +      DD   T E 
Sbjct: 94  LEVEKKLGLDGKDQIEQYGLEPFIRECKESVWKYKGMWEDFSNTVGFWADMDDPYVTYEN 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
              ++     K+I DKG +YKG     Y  R     +  EV +G       +     +  
Sbjct: 154 NFIESEWWALKQIWDKGLLYKGFKVVPYCPRCGTPLSSHEVAQGYKDVKERSAIARFKVK 213

Query: 161 EEEGYFFRLS 170
           +E+ Y    +
Sbjct: 214 DEDAYILAWT 223


>gi|254472183|ref|ZP_05085583.1| leucyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211958466|gb|EEA93666.1| leucyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 830

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 96/258 (37%), Gaps = 9/258 (3%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+ + H+GH     + DV+ARF R  G +VL   G D  G     AA    V  K 
Sbjct: 1   MFPYPSGRLHMGHVRNYSMGDVVARFKRARGFNVLHPMGWDAFGMPAENAAAEKKVHPKG 60

Query: 72  FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   N    R     + +S+D      T ++ ++   + L+    + G +Y+      + 
Sbjct: 61  WTYDNIAAMRGQLKTIGLSFDWSREFATCDESYYAQQQALFLDFLEAGLVYRKNAKVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D     +++V  G            V+  +   +FF++S + ++LL   ++  E+   
Sbjct: 121 PVDMTVLANEQVIDGKG----WRSGAVVEQKDLTQWFFKISDHSEELLEAIDTLTEWPEK 176

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWG---IKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
           +    +       GLK      +T   G   ++I       +Y       +         
Sbjct: 177 VRLMQKNWIGKSVGLKVNFEFTETAPTGDETLEIFTTRPDTLYGASFMGLSPDHPITQKL 236

Query: 247 NPDGSKAKFWPADLHVIG 264
             + ++ + + A+   IG
Sbjct: 237 AENNAELQEFIAECRRIG 254



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 16/178 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV+DP ++I+  G D  R F++ +    +D  + +DG+        A     
Sbjct: 587 EKMSKSKKNVVDPTDIIDTYGADTARLFVLSDSPPERDIIWTEDGVIG------AWRHVQ 640

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R +  + +  D     P  F++   ++  V  + L  I ++      +RA+A++   
Sbjct: 641 RVWRIIGEVAEKTDANTARPAEFSDEATALRRVSHKTLAAITKDFDGLGFNRAVARLYEF 700

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + + +   A        + PD A    +   E    +  L++   P L+ + + +L 
Sbjct: 701 TNAISKALQA------DLSKPDMA----FALREAAGFILQLMEPITPHLSEECWSMLG 748


>gi|189083221|sp|A4VY58|SYL_STRSY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 833

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 105/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +       + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E++++   + A+AQ++
Sbjct: 659 -KFLDRVYRLLT--------TKELVAENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  L 
Sbjct: 710 IFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQGLA 749

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 750 NTGQSISYVAWPT 762


>gi|296158135|ref|ZP_06840967.1| valyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295891471|gb|EFG71257.1| valyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 959

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 119/366 (32%), Gaps = 59/366 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   K+     + +      G  + 
Sbjct: 409 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVAKTEEDARAKATAAGYTG-ALK 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +      
Sbjct: 468 RDED-VLDTWFSSALVPFSSLGWPNETQELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 525

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 526 FTGKVPFDTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLDSLVAKRTTGLMNPKQA 585

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 586 ASIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 642

Query: 363 SRSVSMILKDYDGMIPTPG-----------AFTESDESILSVCSRVLQEIRENMQNQLIH 411
           +R V M  + +D     P             F+ +D  I+S   RV  EI +   +    
Sbjct: 643 TRFVLMNCEGHDCGFGKPEQCGECGPDGHLNFSSADRWIVSRLQRVEAEIAKGFTDYRFD 702

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
                +   V +   D Y +  K  +++   P++        + V+  +  L    +P +
Sbjct: 703 NVANALYKFVWDEYCDWYLELAKV-QIQTGQPNQQRATRRTLLRVLETVLRLAHPVIPFI 761

Query: 470 ANKIFD 475
              ++ 
Sbjct: 762 TEALWQ 767



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 18/147 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   I           H+GHA+   I D L R+HR+ G + L+  GTD  G      
Sbjct: 41  ENRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIV 100

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
            +                        +  Q+     +    L   I +     T + +  
Sbjct: 101 VERQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITNQVRRLGASIDWSREYFTMDDKMS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSL 130
              R ++ ++ ++G IY+G     +  
Sbjct: 161 AAVRDVFVRLYEQGLIYRGKRLVNWDP 187


>gi|294628841|ref|ZP_06707401.1| isoleucyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292832174|gb|EFF90523.1| isoleucyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 1048

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/387 (13%), Positives = 126/387 (32%), Gaps = 13/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +        G++ +   N + W  
Sbjct: 396 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLEENEKTNWFPETVKHGRFGDWLTNNIDWAL 455

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         ++  L+   S  E           +   +  + +++ +      G
Sbjct: 456 SRNRYWGTPLPVWRCEEGHLTCVGSRAELTELTGADQSGLDPHRPFIDEVTFACPQDGCG 515

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                 P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 516 ATATRVPE-VIDAWYDSGSMPFAQWGYPYKNKELFESRYPAQFISEAIDQTRGWFYTLMA 574

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 575 VGTLVFDRSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 634

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++     ++      P P      D  +LS 
Sbjct: 635 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSNWAPSGADPAPADRPVLDRWLLSE 694

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++ + ++     RA   + + V ++  ++  +      + +     T      E
Sbjct: 695 LHALTDQVTQALEAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 750

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V+  +  L+    P +  +++  L V 
Sbjct: 751 VVETVTKLMAPLTPFITERVWQDLVVP 777



 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 41  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 101 VEKELGFSGKQDIEAYGIAEFNAKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG + +      +  R     +D E+ +G +
Sbjct: 161 VESVWWSLKEIFDKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 204


>gi|253752723|ref|YP_003025864.1| leucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754549|ref|YP_003027690.1| leucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756482|ref|YP_003029622.1| leucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189083219|sp|A4W4F3|SYL_STRS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251817012|emb|CAZ52661.1| leucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818946|emb|CAZ56789.1| leucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820795|emb|CAR47557.1| leucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759140|gb|ADV71082.1| leucyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 833

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 105/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +       + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E++++   + A+AQ++
Sbjct: 659 -KFLDRVYRLLT--------TKELVAENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  L 
Sbjct: 710 IFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQGLA 749

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 750 NTGQSISYVAWPT 762


>gi|326803168|ref|YP_004320986.1| leucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650987|gb|AEA01170.1| leucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 804

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K   K Y      YP+ Q  H+GH       D+++R  R  G +VL   G D  G    +
Sbjct: 28  KSLPKFYALDMFPYPSGQGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F   N   F+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTQANIEVFKKQIESLGFSYDWDREIDTTDPEYYKWTQWIFTKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G         ++PV     + +  +++AY D+LL 
Sbjct: 148 AYEDEIMVNWCEALGTVLANEEVIDG----LSERGNHPVVRRPMKQWVLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 204 GLDDLDWPESIKEMQRNWIGRSE 226



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 102/266 (38%), Gaps = 43/266 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   Y+      +N +      A +W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSSWYYIRFCDPKNNEELISQEAANYWMNVDLYIGGAEHAVLHLLYARFWN 545

Query: 280 LSA-------NLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +              +K+F+ G IL +G EK+SKS GNV++P +++E  G D LR + + 
Sbjct: 546 MFLYDLGVVPTEEPFQKLFNQGMILGEGHEKMSKSKGNVVNPDDIVERYGADTLRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    + +DGL          G    + R   + +   D +             + 
Sbjct: 606 MGPLDASIAWSEDGL---------AGARRFLERVWRLFVDSEDQLRDRITTIDTG--ELD 654

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            V ++ ++++ E+++    + A++Q++  V+E ++      P++  K             
Sbjct: 655 KVYNQTVKKVTEDLEKLHFNTAISQMMVFVNEANK--AESIPYDYAKG------------ 700

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
                    LL    P L  +++  L
Sbjct: 701 ------FVQLLAPIAPHLGEELWQRL 720


>gi|319940223|ref|ZP_08014575.1| leucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810525|gb|EFW06861.1| leucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 833

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E+        + +   I
Sbjct: 207 LEALDWPESIKDMQRNWI 224



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 106/317 (33%), Gaps = 85/317 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +  +    + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPL-----------------------PKKV------FSHGFILHK--- 299
                   +S   P                          KV      F H     +   
Sbjct: 547 KFLYDLGVVSTKEPFQRLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E  G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVERYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V ++ ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLLT--------TKEIVAENSGALDKVYNQTVKAVTEQLEELKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V   +    LL  F P L+ +++  L 
Sbjct: 710 VFVNAAN------------KEDK--------LFVSYAKGFVQLLAPFAPHLSEELWQTLT 749

Query: 479 VADENRC---FQSLDQR 492
            + E+     + + D+ 
Sbjct: 750 QSGESISYVPWPTWDEA 766


>gi|255009325|ref|ZP_05281451.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147078|ref|ZP_07809271.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135845|gb|EFR53205.1| isoleucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 1141

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 113/326 (34%), Gaps = 13/326 (3%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           EE Y     +     +       +  +P E   E  + +      +         G  + 
Sbjct: 546 EELYNEIEKSVASGYMQSNPYKDKGFIPGEYNEENYNKIDLHRPYVDDIILVSKDGKPMK 605

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPA 277
            +   ++ VW D+         Y             +PAD    G D     F  ++  A
Sbjct: 606 RETD-LIDVWFDSGAMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIA 664

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +   
Sbjct: 665 TMVFDSVSYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWD 724

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           +  +D +G+++                ++   +  ++            E D  ILSV +
Sbjct: 725 NLKFDVEGIEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMSDRPEIDRWILSVLN 784

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVT 451
            +++E+          +A   +   V++   + Y   + ++ W           +     
Sbjct: 785 TLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGGFTQDKLSAYQTL 842

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +  +A L+    P  A++++  L
Sbjct: 843 YTCLETVAKLMAPIAPFYADRLYGDL 868



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 67/449 (14%), Positives = 129/449 (28%), Gaps = 65/449 (14%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV------DQNSRNFRDMADVLDISYDDFIR-------------TT 98
           +    + +   TK  +       + + + R         ++D                T 
Sbjct: 94  VELGVEKSLGITKEDIGKTISVAEYNAHCRQDVMKFTKEWEDLTHQMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +     ++ +       + +      P    +     V   +  +++       G 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFIAWTT-----TPWTLPSNTALCVGPKIDYVAVQSYNAYTGQ 267

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
            I         V   AL N   +    +          P D  V  K I  +        
Sbjct: 268 PITV-------VLAKALLNAHFSPKAAELKLEDYK---PGDKLVPFKVIAEYKGTDLVDM 317

Query: 279 LLSANLPLP-------KKVFSHGFILHKGE---KISKSLG---------NVIDPIEVIEE 319
                +P         + +         G     I+ + G           + P++++ +
Sbjct: 318 EYEQLIPWVNPGEGAFRVILGDYVTTEDGTGIVHIAPTFGADDAQVAKAAGVPPLQLVNK 377

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G   LR  +            D+D +K+RVN DL          +   +   YD  +  
Sbjct: 378 KG--ELRPMVDLTGKFYTLDELDEDFVKQRVNVDLYKEY------AGRFVKNAYDPNLSD 429

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQ 408
                +    ++   +    +I +++ N 
Sbjct: 430 QDESLDVSICMMMKVNNQAFKIEKHVHNY 458


>gi|313157310|gb|EFR56735.1| valine--tRNA ligase [Alistipes sp. HGB5]
          Length = 875

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 126/391 (32%), Gaps = 54/391 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F  +                  +P + +N         +KD  +SR+   W
Sbjct: 351 IEPKLSMQWFLSMEELARPATKAVMEDAIRFVPEKYKNT-YRHWMENIKDWCISRQ-LWW 408

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       + ++  W  +    ++
Sbjct: 409 GQRIPAYYLPKGGYVVAPTAEEALAKARAKTGDDSLQPSDLRQDEDVLDTWFSSWLWPIS 468

Query: 241 TTG-YLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
                 +  +   + ++P +  V G DI+ F    +    +      P     F+     
Sbjct: 469 VFDGIRNPDNQEISYYYPTNDLVTGPDIIFFWVARMIMAGYEYRGEKPFGNVYFTGIVRD 528

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SK LGN  DP+++I + G D +R  ++   + G D  +D+   ++    +  N 
Sbjct: 529 KIGRKMSKQLGNSPDPLDLIAKYGADGMRMAMLISSSAGNDVMFDEALCEQ--GRNFGNK 586

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N             D           + E       R L++I E+ ++  I  A    
Sbjct: 587 IWNAYRLVNGWSA---DDKAAQDDNNRLAVEWFRQTLGRALRQIDEDFRSYRISEAFMTA 643

Query: 418 ISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             L  +     Y +  KP       P  A T    T     +L  +L  F+P +  +I+ 
Sbjct: 644 YKLFWDDFSGLYLEMVKP---AYGQPVDAET-FAATCGFFDELMRVLHPFMPFVTEEIWQ 699

Query: 476 ILFV--ADENRCFQSLDQRLKPGFMLHKTFD 504
            L      E+ C   + Q ++    L   F+
Sbjct: 700 DLAPRKEGESICTAPMPQPVEADERLLARFE 730



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 20/158 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE   I           H+GH     + DVL R  R+ G +  +  G D          
Sbjct: 32  QREPYTIVIPPPNVTGMLHMGHMLNNTLQDVLVRRARMSGRNACWVPGMDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
                                    + ++           L  S D   RT    +    
Sbjct: 92  VAMLHEKGIEKSSLSREKFLEYAWEWKEKYGGMILKQLRKLGASCDWE-RTCFTMDGPRT 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++   ++  + +KG IY+G     +    +   +D+EV
Sbjct: 151 ESVIKVFCDLFEKGRIYRGVRMVNWDPAAKTALSDEEV 188


>gi|310659347|ref|YP_003937068.1| leucyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826125|emb|CBH22163.1| leucyl-tRNA synthetase [Clostridium sticklandii]
          Length = 800

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++EK Y      YP+ Q  H+GH       DV+AR  RLDG +VL+  G D  G     
Sbjct: 29  SDKEKFYPLVEFPYPSGQGLHVGHPRSYTALDVVARRRRLDGYNVLYPIGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  K+    N  NF+     L IS+D    I TT++ ++   + ++ ++ +KG 
Sbjct: 89  YAIKNKIHPKIVTKDNIANFKRQLMSLGISFDWSREINTTDEGYYKWTQWIFIQLFNKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV +G            V   E+  +  +++ Y D+L+ 
Sbjct: 149 AYKNKMPINWCNSCKVGLANEEVIQGT----CERCGGEVVRKEKNQWMLKITEYADRLID 204

Query: 179 YYESHPEFILPIERRNEVI 197
             +          ++   I
Sbjct: 205 DLDLVNYIDRVKIQQKNWI 223



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 110/355 (30%), Gaps = 67/355 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+ + E+ G+     +     L                 E       
Sbjct: 418 WVFSRQRYWGEPIPLVYCEKCGWVPLPDSELPLTLPEV--------------ESYEPTDD 463

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKF 255
           G   LS               P       M  W         Y       +        +
Sbjct: 464 GESPLSKITDWVSTTCPCCSGPAQRETDTMPQWAGSSWYFLRYADPDNNEELASKKALDY 523

Query: 256 W-PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKS 306
           W P D +  G +    H +Y   +              P  K+      +    EK+SKS
Sbjct: 524 WMPVDWYNGGMEHTTLHLLYSRFWHKVLYDIGVVTNPEPYAKRTSHGMILGENNEKMSKS 583

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P E++EE G D  R + +      K   +   G+K         G    + R+ 
Sbjct: 584 RGNVVNPDEIVEEYGADTFRMYEMFIGDFEKSVPWSSLGIK---------GCRRFIERTW 634

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +       MI     F++    I S   + ++++ E+ +    + A+A ++SL++E+  
Sbjct: 635 KL-----QEMIREEDIFSD---KIESSLHKTIKKVTEDYETLKFNTAIAAMMSLINEIY- 685

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                               +  +T +  +   ILL    P +  +++ ++    
Sbjct: 686 -------------------DIGGITKKDYQTFLILLNPVAPHVTEELWQLMGFDG 721


>gi|193794332|gb|ACF21378.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794522|gb|ACF21473.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQSRLATVLHTLAQVVTDL 166


>gi|193794316|gb|ACF21370.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794334|gb|ACF21379.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794336|gb|ACF21380.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794344|gb|ACF21384.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794352|gb|ACF21388.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794358|gb|ACF21391.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794366|gb|ACF21395.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794372|gb|ACF21398.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794384|gb|ACF21404.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794386|gb|ACF21405.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794394|gb|ACF21409.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794396|gb|ACF21410.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794398|gb|ACF21411.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794400|gb|ACF21412.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794404|gb|ACF21414.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794416|gb|ACF21420.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794418|gb|ACF21421.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794428|gb|ACF21426.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794446|gb|ACF21435.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794456|gb|ACF21440.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794462|gb|ACF21443.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794466|gb|ACF21445.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794476|gb|ACF21450.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794496|gb|ACF21460.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794498|gb|ACF21461.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794504|gb|ACF21464.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794506|gb|ACF21465.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794518|gb|ACF21471.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794520|gb|ACF21472.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|315222465|ref|ZP_07864363.1| leucyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188433|gb|EFU22150.1| leucyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 833

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEDLDWPESIKDMQRNWI 224



 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 106/317 (33%), Gaps = 85/317 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +  +    + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGIVPTKEPFQKLFNQGMILGTSYRDSRGALIASDKVEKRDGSFFNIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V++  G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVDRYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +     E+  ++  V ++ ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLLT--------SKEIVAENSGALDKVYNQTVKAVTEQIEELKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               DR        VE  + L  LL  F P LA +++  L 
Sbjct: 710 VFVNSANK--------------EDRLY------VEYAKGLIQLLAPFAPHLAEELWQGLT 749

Query: 479 VADENRC---FQSLDQR 492
            + E+     + + D+ 
Sbjct: 750 QSGESISYVLWPTWDEA 766


>gi|313665541|ref|YP_004047412.1| leucine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949602|gb|ADR24198.1| leucine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 804

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 3/187 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
              +K Y+     YP+    H+GH       DV +RF R+ G DVL   G D  G    +
Sbjct: 27  SNHKKAYVLDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   + F  +N  NF+     +  SYD    I T +  ++   + ++K++  KG 
Sbjct: 87  YALKTGNDPRDFTLKNIENFKAQLVKMGFSYDYDKEINTADPNYYKVTQWIFKELYKKGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                    +         +DE+ +           +PV   +   +  +++ Y DKLL 
Sbjct: 147 AENRNIDVNWCQELGTVLANDEIIEKDGLMVSERGEHPVVKRKMRQWVLKITDYADKLLK 206

Query: 179 YYESHPE 185
             ++   
Sbjct: 207 GLDNLDW 213



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 45/249 (18%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL--------SANLPLPKKVFSHGFILHKGEKIS 304
            K+ P DL++ G++    H +Y   +            + P  +       +     K+S
Sbjct: 523 EKWLPVDLYIGGQEHAVGHLLYSRFWTHFLYDLGLLPTSEPFQRLFNQGMILGSDNRKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +VI+  G DALR + +          +  DGL               ++R
Sbjct: 583 KSWGNVINPDDVIDTHGADALRLYEMFMGPLDASLPWSFDGLDAS---------LKWLNR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              MI K              ++  +  V + V++++ + ++    + A++Q++ LV+ +
Sbjct: 634 CYRMINK--------VEFSNTNNHKLDYVYNDVVKKVTQMIKELKFNTAISQLMVLVNAI 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADE 482
            +               +  STV    +E       +L  F P LA ++++ L    +  
Sbjct: 686 YK---------------EELSTVYKPYIEGF---VKMLSLFSPHLAEELWEKLGNRTSVT 727

Query: 483 NRCFQSLDQ 491
            + +   D+
Sbjct: 728 LQTWPEFDE 736


>gi|291546222|emb|CBL19330.1| leucyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 805

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKMLQGYYLIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   V    N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 89  AIKMGVHPAVSTAANIKNIKRQINDIAAIYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G           PV       +  R++ Y D+LLS 
Sbjct: 149 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTPVTKKNLRQWMLRITKYADRLLSD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 205 LDKLDWPEKVKKMQTDWI 222



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 114/346 (32%), Gaps = 55/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 414 YKLRDWVFSRQRYWGEPIPIVHCPKCGAVPVPEDQLPLRLPEVESYQPTGTGESPLAAID 473

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +        P       M  W         Y+      +     KA  + P D+++ 
Sbjct: 474 EWVNTTCPCCGAPAKRETNTMPQWAGSSWYFLRYVDNKNNKELVSKEKADKYLPVDMYIG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNVI P +
Sbjct: 534 GVEHAVLHLLYSRFYTKFLYDIGAIDFDEPFVKLFNQGMITGKNGIKMSKSKGNVISPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D+LR + +       D  +D  G+         +G+   + R  ++ L   + 
Sbjct: 594 LVNDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVSRFLKRFWNLALDSIEK 644

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            IP         + +     +++ +I   ++   ++  ++  +      ++     K   
Sbjct: 645 DIPAT-------KEMEKTRHKMVYDITSRLEAFSLNTVVSGFMEY---TNKLIAIAK--- 691

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                         V  E I+ + ILL  FVP +A +I++ L   D
Sbjct: 692 ---------QNDGAVDKETIKTVTILLAPFVPHIAEEIWEKLGHED 728


>gi|32490917|ref|NP_871171.1| hypothetical protein WGLp168 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173146|sp|Q8D333|SYL_WIGBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|25166123|dbj|BAC24314.1| leuS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 864

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 92/210 (43%), Gaps = 6/210 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +++K Y  + + YP+ + H+GH    ++ DV+AR+ R+ G +VL   G D  G     A
Sbjct: 30  SKKDKYYCVSMMPYPSGKLHMGHVRNYVLGDVIARYQRMLGKNVLHPIGWDAFGLPAETA 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N  ++ + +   +    ++   +L  SYD    I T + +++   ++L+ K+ +K   
Sbjct: 90  AINNKISPEKWTISSIEYMKNQLKLLGCSYDWSREIITCDPKYYKWEQLLFTKLYNKNKA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +  +D+    +++V             + ++  +   +F +++ Y D+LL+ 
Sbjct: 150 YKKKSIVNWCPKDKTVLANEQVIDN----LCWRCSSNIEMKKIFQWFIKITDYADELLND 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSL 209
                 +   ++           G+  L  
Sbjct: 206 LNDLKLWPKKVKVMQRNWIGKSKGIDVLFH 235



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 71/183 (38%), Gaps = 18/183 (9%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  N +DP  +I + G D LR F++          +   G+           +  
Sbjct: 618 SKMSKSKNNGVDPQGIINKYGSDTLRLFIMFAAPPELSLEWSDKGIIGANR--FIKKLWK 675

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVIS 419
           +   + + +    +          E D  +L     V+ ++ +++      + A+A+++ 
Sbjct: 676 I---TYNYLNLKKNNNYVFYKKLKEQDNILLEKSFYVINKVTKDIDKNQTFNTAIAEIMK 732

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           L + ++ Y +  +   +             +  +V+  +  LL  F+P +   +++ +  
Sbjct: 733 LTNHLNSYINKNEYNNI------------SIIKKVLMIIIRLLYPFIPHVCFVLWNEINK 780

Query: 480 ADE 482
            ++
Sbjct: 781 NND 783


>gi|269215567|ref|ZP_06159421.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131054|gb|EEZ62129.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 952

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 74/470 (15%), Positives = 143/470 (30%), Gaps = 39/470 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SY 91
           +   +   V      D+ G+ +    + AG+ T     +     R    ++       SY
Sbjct: 350 YKVCERFGVPMIMPVDDDGRFMDVVPEFAGMDTDEANPRIIERLRARGTLVGFKEIEHSY 409

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               R  E          +  + + G   +          +E + N   V +    +   
Sbjct: 410 PHCWRCHEPVIFRATDQWFVSMDETGLRERA--------LEEIHENVRWVPEWGQNRIGA 461

Query: 152 AQHNPVQWM--EEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLK 205
              +   W    +  +   +  ++        +       +            F +   +
Sbjct: 462 MVADRPDWCISRQRSWGVPIPVFKCASCGEIVADASTFDAVIDLFNTEGADAWFTRDPSE 521

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            L         G       + I+ VW ++  +++       +        WPADL++ G 
Sbjct: 522 YLPAGTCCPKCGGTDLRPEKDILDVWWESGVSHVGVLK---HRADEDRLHWPADLYLEGS 578

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +          + P    +     +   GEK+SKS GN IDP EV +  G D
Sbjct: 579 DQHRGWFQSSLLCGVGAYGSAPYKAVMCCGFTVDEHGEKMSKSKGNGIDPKEVTDTYGAD 638

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR ++        D       LK+  +A            +   +L + DG      A 
Sbjct: 639 VLRLWVSSTDYSV-DVSIGDTILKRTSDA------YRRFRNTFRFLLANLDGFDDATDAV 691

Query: 384 TESDE-----SILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL 436
             +D        +   S VL E+         H+    +   V       Y D  K    
Sbjct: 692 ELADMDPIDVWAMLRLSDVLAEVGRAYDEYHFHQVFRTLYDYVVTDLSAVYMDVVKDRLY 751

Query: 437 KKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
            +    RA  +V  V + ++  L  ++   +    +++++    A  NR 
Sbjct: 752 SEAPDSRARRSVQTVLMNILEVLVRIMSPILSFTCDEVWEHYPEAARNRA 801



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 16/161 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 47  RDGEPFVLHDGPPYANGPIHIGHAFNKILKDFVVKSHAQRGYFTPYVPGWDCHGQPIEHE 106

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
            +    T K               + ++     R+    L +   +D    T +      
Sbjct: 107 VEKKLGTEKMSQLPQATVRRLCREWAEKFVDVQREGFKRLGVNGEWDRPYLTFQPTFESA 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++KK+   G +Y+G     +  R      + E+  G +
Sbjct: 167 NVEVFKKMYLSGAVYRGRKPIHWCKRCHTALAEAEIEYGME 207


>gi|71997517|ref|NP_001021876.1| Leucyl tRNA Synthetase family member (lrs-2) [Caenorhabditis
           elegans]
 gi|30962533|dbj|BAC76733.1| leucyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
 gi|33300375|emb|CAE18063.1| C. elegans protein ZK524.3b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 828

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 5/184 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + HIGH     I+D  AR++RL+G +V+   G D  G     AA++ 
Sbjct: 27  KKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYEVIHPIGWDSFGLPAENAARDK 86

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  + +   N  + +       I +D    I T E       + ++ K+ + G + +  
Sbjct: 87  GVDPREWTINNIESMKQQLLKTKILFDWEKEISTCEPEFFRWTQWIFCKLFEYGLVKRTS 146

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
               +   D+     +++          A+    +  +   +      Y  +L       
Sbjct: 147 SEVNWDPIDKTVLAAEQIDNDGKSWRSGAKA---EKKKLSQWMIETPKYAKRLQEGLRKM 203

Query: 184 PEFI 187
            E  
Sbjct: 204 SEQW 207



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 25/180 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +D   +++  GVD  R  L+   A      + +  LK         GI  
Sbjct: 536 EKMSKSKNNGVDLAAILDSEGVDMTRLRLLEAAAPRAPINWGETDLK---------GIKK 586

Query: 361 LVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH-RALAQV 417
           L+ R  ++  +  D            E D SI    +  ++ +   ++   +H  AL ++
Sbjct: 587 LLDRIAAINSQIVDARDNGKPIELKKEIDGSIKETYNFFVRNVGMCLEVLHLHNTALMRI 646

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +             LKK +P   +         ++ L I+LQ F P +A++++  L
Sbjct: 647 QGFTNA------------LKKVDPIYLAHSPE-GQRAVKSLIIMLQVFCPHVASEMWSAL 693


>gi|55820318|ref|YP_138760.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822208|ref|YP_140649.1| leucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627157|ref|YP_819776.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|81820359|sp|Q5M1L6|SYL_STRT1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81820521|sp|Q5M657|SYL_STRT2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122268240|sp|Q03MJ2|SYL_STRTD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|55736303|gb|AAV59945.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738193|gb|AAV61834.1| leucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116100434|gb|ABJ65580.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312277634|gb|ADQ62291.1| Leucyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 101/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++  +  V +  ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGGLDKVYNETVKSVTEQIELMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  L 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTLT 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|313890366|ref|ZP_07823997.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121209|gb|EFR44317.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    +
Sbjct: 29  TSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPAAFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEEVDWPESIKDMQRNWI 224



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 102/316 (32%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDQALADPELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------------KVFSHGFILHK--- 299
                   +    P  K                               F H     +   
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDNSFFHVETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NVI+P +V+EE G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVINPDDVVEEYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKALVAENSGALDKVYHETVKTVTEQIEAMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             ++  ++  +     +  K                      L+  F P L  +++ ++ 
Sbjct: 710 IFINAANK--EESLFEDYAKG------------------FIQLIAPFAPHLGEELWQVVT 749

Query: 479 VADENRC---FQSLDQ 491
            ++ +     + + D+
Sbjct: 750 GSEASLSHVAWPTWDE 765


>gi|294890761|ref|XP_002773301.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239878353|gb|EER05117.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1057

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 112/366 (30%), Gaps = 52/366 (14%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS----RKTFDWGI 218
           E  +F             +      +P  +  +     +        +    R +   GI
Sbjct: 501 ESTWFNWLENIRDWCVSRQLWWGHRIPAYKVVKPCYTEEQWFVGRDEAEALERASEKLGI 560

Query: 219 K-----IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
                 +  DP  ++  W  +    ++  G+ D        F+P+ +   G DIL F   
Sbjct: 561 PESDIELAQDPD-VLDTWFSSGLLPMSALGWPDMNTDDMKAFFPSSVLETGHDILFFWVA 619

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +   +  L+  LP              G K+SKSLGNVIDP+EV+  +G+  L+  L  
Sbjct: 620 RMVMMSLALTDELPFHTVCLHSMVRDAHGRKMSKSLGNVIDPLEVMSGIGLPELQEKLKH 679

Query: 332 EIACGKDGFYDKDGLKK--------------------------RVNADL-----ANGIGN 360
                ++      G +K                           +N D+          N
Sbjct: 680 GNLPEREIKKAMKGQEKDFPDGIPECGSDALRFGLLAYTGQARSINLDINRVVSYRYFCN 739

Query: 361 LVSRSVSMILKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +   +   L ++         P        D+ ILS  S       + ++      A  
Sbjct: 740 KLWNVMKFALPNFGESFKSRGLPLDAKLEWEDKWILSRLSDAAGAANKGIKEFNFSDATT 799

Query: 416 QVISLV--SEVDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +       D Y +  K     L+  + +       V    + +   LL   +P +  
Sbjct: 800 ATYNFWLYDFCDYYLELVKKRFRALEGGDSEELRIAREVLYICLDRGLRLLHPLLPFVTE 859

Query: 472 KIFDIL 477
           +++  +
Sbjct: 860 ELYQRI 865



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +K  +           H+GHA    I D + R+HR+ G   L+  GTD  G       
Sbjct: 127 DSQKFVMCVPPPNVTGTLHLGHALMACIEDSMTRWHRMMGHQTLWIPGTDHAGIATQSVV 186

Query: 63  QN---------------AGVTTKVFVDQNSR---NFRDMAD-VLDISYDDFIRTTEKRHH 103
           +N                    KV+  +N +     + M      + +D    T +    
Sbjct: 187 ENLLLRDEGLSRHDLGREKFLEKVWAWKNEKGNTICKQMERLASSLDWDRQFFTMDDNLS 246

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +  + +  D+G IY+      +        +D EV  
Sbjct: 247 TAVKEAFVRFYDEGKIYRDTRLVNWCPYLRTALSDLEVDH 286


>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 911

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/462 (14%), Positives = 148/462 (32%), Gaps = 37/462 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SY 91
           F+     ++      D  G     A +  G+  +       +   +   +L +     SY
Sbjct: 334 FNAGRKYNLEVLCPVDYRGYMTKDAFEFEGMYYEDANKAVGQKLEEKGALLGLKFITHSY 393

Query: 92  DDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               RT +        +      + KG + +      +          + +   AD    
Sbjct: 394 PHDWRTKKPIIFRATEQWFASIEALKGQMMEQIKEVNWLPAWGEVRLGNMIKDRADWCIS 453

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +             F     +  L     +H   +   +  N         L     +
Sbjct: 454 RQRV-----WGVPIPVFYAEDGEAILDESVINHVANLFREKGSNIWFELEAEELLPAGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G         IM VW D+ +++ +           +   +PADL++ G D    
Sbjct: 509 HPGSPNG--KFRKETDIMDVWFDSGSSHHSVLV-------ERGLPYPADLYLEGSDQYRG 559

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++       ++   P    V     +  +G K+SKS+GNVIDP+++I+  G D +R +
Sbjct: 560 WFNSSLSTGVAMTGRAPYKTVVSHGFVLDGQGRKMSKSIGNVIDPLKLIKIYGADIVRLW 619

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AF 383
           +        D    +D +K+   +         +  +   +L +     P          
Sbjct: 620 VASVDYQA-DVRISEDLIKQVAES------YRKMRNTFRFLLGNLFDFNPETDLVAYEDL 672

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTN 440
            E D+ ++   + + +E++   +          V + +       Y D  K    ++K +
Sbjct: 673 NEVDQFMMIRLNELTKELKSAYEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEKAD 732

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                ++  V    +  +  LL   +P  A++++  +    E
Sbjct: 733 SQARRSIQTVLYHHVYDMCRLLAPVIPHTADEVYSYIPGHTE 774



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    +     Y N   H+GHA   I+ D + RF  +DG    +  G D HG  I +A
Sbjct: 45  QDKTPFVLHDGPPYANGNIHMGHALNKILKDFVVRFKNMDGYYAPYIPGWDTHGLPIEQA 104

Query: 62  AQNAGV-------------TTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
             N                  K +  +     +     L +   +D+   T +K +    
Sbjct: 105 LTNNKKVNRKEKTVAEFRELCKEYALEQVEGQKTQFKRLGVLGDWDNPYITLQKEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +++ K+  +G IYKG    ++S   E    + E+     
Sbjct: 165 ILVFGKMVKEGLIYKGLKPIYWSPSSETALAEAEIEYHDK 204


>gi|195066025|ref|XP_001996766.1| GH24997 [Drosophila grimshawi]
 gi|193896621|gb|EDV95487.1| GH24997 [Drosophila grimshawi]
          Length = 1046

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 76/425 (17%), Positives = 126/425 (29%), Gaps = 97/425 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   +           S    ILP             G++D 
Sbjct: 450 PICSRSKDVVEPLIKPQWYVSCADMAASATEAVRSGELKILPEHHTKTWY-HWMDGIRDW 508

Query: 208 SLSRKTFDWGIKIP---------------------------------------------- 221
            +SR+   WG +IP                                              
Sbjct: 509 CVSRQ-LWWGHRIPAYHVTFKDASIKAGTPDAEEYWIVARSEQEALIKAAARFGVNASEI 567

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ DN    +A F+P  L   G DIL F    + +  
Sbjct: 568 VLHQDEDVLDTWFSSGLFPFSVFGWPDNTADLQA-FYPTSLLETGHDILFFWVARMVFFG 626

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------- 318
             L   LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 627 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVICGISLEGLHEQLVGSNLDPR 686

Query: 319 ------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + ++        N I N
Sbjct: 687 EIEMAKLGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVQG--YRFFCNKIWN 744

Query: 361 LVSRSVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++      + Y+  I         D  ILS  +  +       +        +   
Sbjct: 745 ATKFALLYFTGKERYNTQITLDDESNRMDAWILSRLAATIDACNTGFEAYDFAAVTSACY 804

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D Y +  KP  L  +   +A+         +     LL  F+P +  ++F  
Sbjct: 805 AFWLYDVCDVYLECLKPIFLSGSQEQQAAA-RRTLYVCLDYGLRLLSPFMPFITEELFQR 863

Query: 477 LFVAD 481
           L  AD
Sbjct: 864 LPRAD 868



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 21/145 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R++R+ G   L+  G D  G       +  
Sbjct: 127 KFIMVIPPPNVTGSLHLGHALTNAIEDAITRYNRMKGRTTLWVPGCDHAGIATQVVVEKL 186

Query: 66  GVTTK-------------VFVDQNSRN----FRDMADVLDISYDDFIR---TTEKRHHDT 105
               +               +    R       D    L  SYD + R   T + +    
Sbjct: 187 LWREERLSRHDLGREKFIERIWNWRREKGGRIYDQLKALGSSYD-WTRVNFTMDPKLCRA 245

Query: 106 CRILWKKISDKGDIYKGCYSGWYSL 130
               + ++ +KG IY+      +S 
Sbjct: 246 VTEAFVRLHEKGAIYRSSRLVNWSC 270


>gi|193794452|gb|ACF21438.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRAASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|94985204|ref|YP_604568.1| isoleucyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555485|gb|ABF45399.1| isoleucyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 1091

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/467 (14%), Positives = 142/467 (30%), Gaps = 45/467 (9%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF---IRT 97
              +V    G D+HG       +                 R +          +    RT
Sbjct: 381 RRYEVPLLFGVDDHGILQVTKERGKFFKDADKGLIADLKARGLMFHAGTIRHRYPFHDRT 440

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +                     KG Y    S+ D     ++E+     G  +    + +
Sbjct: 441 GDP--------------ILYFAKKGWYIRTNSVADRMLETNEEINWVPPGIKHGRFGHWL 486

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK----- 212
           +      +      Y    L ++ S    +  +    E+ +     L  L L R      
Sbjct: 487 EGN--VDWAISRERYWGTPLPFWMSEDGDLQVVGSVAELSALTGRDLTGLDLHRPSIDDV 544

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------------KAKFWPADL 260
           TF    K       ++ VW D+          L +  G               + +PAD 
Sbjct: 545 TFTRDGKTYRRVPEVLDVWFDSGAMPYAQWHLLTDETGEHALPGTEANLRQFERHFPADF 604

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
                D     F++++  A +L         +     +   G K+SKS GNV++P+ + +
Sbjct: 605 ISEAIDQTRGWFYSLHAIATMLYDQPAYRNVICLGHIVDEHGAKMSKSKGNVVEPLPLFD 664

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI- 377
             G D++R+++      G    +  + L      +  N + N+ +  V  +  + D    
Sbjct: 665 RYGADSVRWYMFMASDPGDQKRFS-ERLVAEAQRNYVNTLWNVYAFFV--LYANLDRPEL 721

Query: 378 ---PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
              P      E D  +L+     ++++  ++           +   V ++  ++  +   
Sbjct: 722 GAAPAVAERPEMDRWLLARLEETVRDVTTSLDAYDARGGGRALERFVHDLSNWYVRRNRS 781

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                      +      E +  ++ L   F P LA  ++  L   +
Sbjct: 782 RFWGEGGQVDLSAYATLHEALLTVSQLTAPFTPFLAEALYRNLTRGE 828



 Score = 45.5 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 24/138 (17%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +          N +P + H       D+  R+  + G  V    G D HG  +  + 
Sbjct: 46  GQPEFVFYEGPPTANGRPALHHVLARSFKDLFPRYKVMQGYFVTRKGGWDTHGLPVEISV 105

Query: 63  QNA----------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
           +                          +    + + +   + +   +D+S D +I T E 
Sbjct: 106 EKKLGLLGRNHGASREELEEFNRLCRASVWETIQEWNTFTQRLGYWVDLS-DPYI-TYEN 163

Query: 101 RHHDTCRILWKKISDKGD 118
            + ++   L K++  KG 
Sbjct: 164 EYVESVWNLLKRLHAKGL 181


>gi|312868060|ref|ZP_07728264.1| leucine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096464|gb|EFQ54704.1| leucine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLTD 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTAKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ +
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQFM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|212541196|ref|XP_002150753.1| valyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210068052|gb|EEA22144.1| valyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 1057

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/444 (15%), Positives = 125/444 (28%), Gaps = 72/444 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP----- 156
             D    + +K+ + G   K   +     R E   +  E                     
Sbjct: 426 RFDARYAVIEKLKEAGLYVKWENNPMVIPRCEKSKDIIEPVLKPQWWMKMDDMAKAAMEA 485

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESH-------PEFILPIERRNEVISFVKSGLKDLSL 209
           V+  E               +   +              P             G  +L +
Sbjct: 486 VEKKEITISPLSAEKNFFHWMRNIQDWCISRQLWWGHQAPAWLVQIEGQVADDGDSNLWV 545

Query: 210 SRKTFDWG------------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           S ++ +                +  D   ++  W  +      T G+ +       K +P
Sbjct: 546 SGRSEEEAQAKAAAKFPGQKFTLKRDED-VLDTWFSSGLWPFATLGWPNTESHDYQKLFP 604

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
                 G DIL F    +   +  L+  +P  K+V+ H  I   +G K+SKSLGNVIDP+
Sbjct: 605 TSTLETGWDILFFWVARMIMLSLKLTGKVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPL 663

Query: 315 EVI-------------------------------------EEVGVDALRYFLVREIACGK 337
           +V                                       E G DALR  LV     G 
Sbjct: 664 DVQRGITLDALHEKLKQGNLAEKEIGVATKYQKKAFPKGIPECGADALRMALVSYTTGGG 723

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCS 395
           D  +D + +         N I       +  +  D+         G  +  +  IL   +
Sbjct: 724 DIAFDVNVI--FGYRRFCNKIYQATKFVLGKLGSDFVPLPKPTKTGRESLPERWILQKFN 781

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +EI   ++ +    + +     +     D Y +  K         +   +       
Sbjct: 782 TAAKEINNAIETREFSVSASTAYQYIYSQLCDVYIENSKSLLQSDAPAEVQESAKQTLYT 841

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +    +L+   +P +   ++  L
Sbjct: 842 ALEGSLLLIHPIMPYITEDLWQRL 865



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 19/143 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++          H+GHA  + + D + R++R+ G   ++  GTD  G       +   
Sbjct: 132 FSMTCPPPNVTGALHMGHALMVALQDTMTRYYRMKGKTTVWVPGTDHAGISTQSVVEKML 191

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                              T+ + D+   +       +  S D      T          
Sbjct: 192 WKEKKQTRHDLGRPEFLKLTQDWKDRYQGSILTSLKAMAASLDWSREAFTMNPNFSAAVT 251

Query: 108 ILWKKISDKGDIYKGCYSGWYSL 130
             + ++ ++G IY+      +  
Sbjct: 252 ETFCRLHEEGTIYRANRLVNWCC 274


>gi|146414856|ref|XP_001483398.1| hypothetical protein PGUG_04127 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1065

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 118/354 (33%), Gaps = 44/354 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E        NE     ++  + L  ++K         +  
Sbjct: 528 WCISRQLWWGHRCPVYYIKVEGETEDRLDNEKWVAGRTYEEALEKAKKRCPDSKFELEQD 587

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +    L+T G+  N       F P  +   G DIL F    +   +  L+ 
Sbjct: 588 EDVLDTWFSSGLWPLSTLGWPHNTR-DMQLFSPLSMLETGWDILFFWVSRMILLSLKLTG 646

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             P  K+VF H  +   +G K+SKSLGNVIDPI+VI  + +  L   L       ++   
Sbjct: 647 KAPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPIDVITGIPLQTLHDKLRTGNLDPRELKK 705

Query: 342 DKDGLKKRV-------------------------------NADLANGIGNLVSRSVSMIL 370
            ++G K                                    +      N + ++   +L
Sbjct: 706 AEEGQKASYPNGIPECGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFVL 765

Query: 371 KDY--DGMIPTPGAFT----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SE 423
                D   P     T      ++ IL   +   + + E++  +    A   + +     
Sbjct: 766 GRLGDDYKPPASSNLTGKELLVEKWILHKLTHTNKAMSESLDKRDFFEATNAIYNFWYDL 825

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K   ++  +P++  +        I     L+  F+P +  +++  L
Sbjct: 826 CDVYIENSKS-LIQDGSPEQKKSAQDTLYTCIDSALKLIHPFMPFVTEEMWQRL 878



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + + D L R++R+ G   LF  G D  G       +   
Sbjct: 146 FTIPAPPPNVTGALHIGHALTVALQDTLIRYNRMKGKTTLFIPGFDHAGIATQSVVEKQL 205

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + +   +  +D    L  SYD      T   +  +   
Sbjct: 206 WANEKKTRHDFGREKFVEKVWDWKEIYHQRIKDQFKRLGASYDWSREAFTMSPQLSEAVV 265

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ + G IY+      +S++
Sbjct: 266 EAFVRLHEDGTIYRASRLVNWSVK 289


>gi|71018857|ref|XP_759659.1| hypothetical protein UM03512.1 [Ustilago maydis 521]
 gi|46099417|gb|EAK84650.1| hypothetical protein UM03512.1 [Ustilago maydis 521]
          Length = 1240

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 125/367 (34%), Gaps = 50/367 (13%)

Query: 158  QWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            +WME  + +      +       Y  + E  L     ++     ++ L+           
Sbjct: 687  RWMENIQDWCISRQLWWGHRCPVYFVNIEGELQDRSDDKYWISGRT-LQQAQERAAKLAG 745

Query: 217  GIKIPDD-PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--I 273
            G K   +    ++  W  +     +  G+ +  D     F+P+ +   G DIL F    +
Sbjct: 746  GKKFTLEQDDDVLDTWFSSGLWPFSIMGWPEKTD-DFKHFYPSSMLETGWDILFFWVAKM 804

Query: 274  YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
                  L+  LP  K+VF H  +    G K+SKSLGNVIDP++VIE + +D L   L   
Sbjct: 805  CMLGVYLTGTLPF-KEVFCHAMVRDAHGRKMSKSLGNVIDPLDVIEGISLDGLHGRLQEG 863

Query: 333  IACGKDG-----------------------------------FYDKDGLKKRVNADLANG 357
                K+                                      + D L+        N 
Sbjct: 864  NLDDKEIAKAAQGQKKDFPKGIPQCGTDALRFALCAYTSAGRDINLDILRVEGYRKFCNK 923

Query: 358  IGNLVSRSVSMI--LKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
            + N    ++  +  +  +         G  +  ++ IL   +   + + EN++ +    A
Sbjct: 924  LWNATKFALLKLEPIASFQPASSDERSGNESLVEKWILHKLNAAAKTVNENLKERNFMAA 983

Query: 414  LAQVISLV--SEVDRYFDAQKPWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
             + V +       D Y +A KP       +    ++        +     LL  F+P + 
Sbjct: 984  TSAVYNFWLYELCDVYIEAIKPITDAGAADAQARASAQQTLYTCLDAGLKLLHPFMPFVT 1043

Query: 471  NKIFDIL 477
             +++  L
Sbjct: 1044 EELWQRL 1050



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           HIGHA  + I D L R++R++G   LF  G D  G       + 
Sbjct: 309 KTFIIPAPPPNVTGSLHIGHALTISIQDTLIRWYRMNGYRTLFNPGYDHAGIATQSVVEK 368

Query: 65  AGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
               T+                  + D       +    L  SYD      T +      
Sbjct: 369 RLAKTEGKSRHDYGREKFLEKVFAWKDDYQSRISNQMRRLGASYDFSREAFTMDPVRSKA 428

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
               + K+ + G IY+      +  +
Sbjct: 429 VTEAFCKLHEDGIIYRANRLVNWCCK 454


>gi|284997707|ref|YP_003419474.1| valyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445602|gb|ADB87104.1| valyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 842

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 28/325 (8%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +      +     E  LPI+         K  L  L L   T             +  V
Sbjct: 452 PFWYCENGHLTPAREKDLPIDPIKTNPPSEKCQLCGLHLKPVT------------DVADV 499

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           WID+    L  T + ++ +    K +PA L + G DI+R    Y  +   +L+ N+P   
Sbjct: 500 WIDSSVTVLFLTKFYEDKNV-FNKTFPASLRLQGTDIIRTWLFYTFFRTLMLANNIPFTT 558

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +K 
Sbjct: 559 VLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIVKG 617

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +    L   + N        I    +  +  P +    D+ IL    + + +     +N 
Sbjct: 618 K--RMLLQKLWNASRLVYPFIA---NQRLDKPESLHIVDKWILQEHKKFVIKAINAYKNY 672

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +  L ++ S   E   D Y +  K   L + +     T+      +IR + +LL    
Sbjct: 673 DFYLVLQELYSYFWEIIADEYLEMIKH-RLFEDDKSAKYTIQR----IIRDIIVLLHPIA 727

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  LF   ++   + L +
Sbjct: 728 PHITEEIYSRLFGYKKSILLEELPK 752



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       
Sbjct: 75  KSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQGLPTELKV 134

Query: 63  QNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRI 108
           Q      K            + +   +  ++    L     ++ F  +T E ++    + 
Sbjct: 135 QYRLGIPKDNRQLFLQKCIEWTEDMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQK 194

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +     I        +  + E      EV  
Sbjct: 195 SLIDMYKTNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|332077556|gb|EGI88017.1| tRNA synthetases class I family protein [Streptococcus pneumoniae
           GA41301]
          Length = 383

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWSESIKDMQRNWI 224


>gi|327314663|ref|YP_004330100.1| isoleucine--tRNA ligase [Prevotella denticola F0289]
 gi|326944400|gb|AEA20285.1| isoleucine--tRNA ligase [Prevotella denticola F0289]
          Length = 1221

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 109/308 (35%), Gaps = 40/308 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           +       ++ VW D+ +       Y    + +                           
Sbjct: 664 RPMHREADLIDVWFDSGSMPYAQLHYPFEGEINAEGLKATGKTEAEYRRELVHSTYEGTA 723

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F+PAD    G D     F  ++  A ++  ++     + S   +  KG K+SK +G
Sbjct: 724 VPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLVLDAKGNKMSKHVG 783

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS-RSVS 367
           NV DP E++ + G D +R++++       +  +D +G+ +         + N  S  ++ 
Sbjct: 784 NVTDPFEMLHKYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFALY 842

Query: 368 MILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
             +  YD            E D  I+S  + +++ +   ++N    RA   + S V    
Sbjct: 843 ANVDGYDAATCESVKAGAPEIDRWIISKLNSLIKGVTHELENFDPTRAGRLIDSFVNNDL 902

Query: 424 VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y   + ++ W   K       +        +  +A LL  F P  A++++  L    
Sbjct: 903 SNWYVRLNRKRFW--GKEMSADKKSAYDTLYTSLMTVARLLAPFAPFYADQLYKDLGGEL 960

Query: 482 ENRCFQSL 489
           E+      
Sbjct: 961 ESIHLDRW 968



 Score = 56.7 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGNPQFIFFEGPPSANGHPGIHHVLARSIKDAFNRYKTMQGFQVHRKAGWDTHGLPVELG 97

Query: 62  AQNAGVTTK----------------------VFVDQNSRNFRDMADVLDISYDDFIR--T 97
            +     TK                        V + +  ++ + + +    D      T
Sbjct: 98  VEKEQHITKKDIDNPASPKYISTEDYNHKCRENVMKFTAEWKQLTEEMGYFVDMEHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLIKQLYNKGLLYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|262283432|ref|ZP_06061198.1| leucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260923|gb|EEY79623.1| leucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    +
Sbjct: 29  KDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F   N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAGNIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEELDWPESIKDMQRNWI 224



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +        + +     E+  ++  V    ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRL--------MTSKEIVAENSGALDKVYHETVKAVTEQIEELKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  L 
Sbjct: 710 IFVNAANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQSLA 749

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 750 QTGESISYVAWPT 762


>gi|290579735|ref|YP_003484127.1| putative leucyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996634|dbj|BAH87235.1| putative leucyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+RF R  G  VL   G D  G    +
Sbjct: 29  SSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYSVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  QN   F+     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGHDPADFTAQNIATFKRQIKSLGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEDLDWPESIKDMQRNWI 224



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 101/299 (33%), Gaps = 79/299 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D++V G +    H +Y   +         +   
Sbjct: 499 WYFLRYIDPHNDQKLADEDLLKQWLPVDVYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 558

Query: 284 LPLPK---------------------------------KVFSHGFILHKGEKISKSLGNV 310
            P  K                                  + +   +     K+SKSL NV
Sbjct: 559 EPFQKLFNQGMILGTSYHDHRGALVATDKVEKRDGSFFNIETGEELEQAPAKMSKSLKNV 618

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +VIE+ G D LR + +          + ++GL+              + R   +I 
Sbjct: 619 VNPDDVIEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLIT 669

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     +++  +  V + V++ + E+++    + A++Q++  V+  ++  + 
Sbjct: 670 --------TKEIAAKNNGHLDKVYNEVVKTVTEHLEAMRFNTAISQLMIFVNAANK--EE 719

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           Q   +  K                      LL  FVP LA +++ +L  + E+  + + 
Sbjct: 720 QLFIDYAKG------------------FIQLLAPFVPHLAEELWQVLTQSGESLSYVTW 760


>gi|193212208|ref|YP_001998161.1| leucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|229559915|sp|B3QM08|SYL_CHLP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193085685|gb|ACF10961.1| leucyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 807

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 11/219 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    +
Sbjct: 28  QDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  ++N  +FR+    +  SYD    + TT+  +    + ++ K+ +KG 
Sbjct: 88  FAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREVNTTDPNYFKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +    +    ++EV +     Y       V       +  +++AY ++LL 
Sbjct: 148 AYISEVDVNWCEELKVVLANEEVDEKIADGYT------VVRRPLRQWVLKITAYAERLLE 201

Query: 179 YYE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
             +    PE +  ++R     S       +L   R    
Sbjct: 202 DLDEVDWPENVKQMQRNWIGRSEGVEIDFELRCHRTNLR 240



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 99/270 (36%), Gaps = 43/270 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +     D S+ ++W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPQNGNALVDPSREQYWMNVDLYIGGAEHAVLHLLYSRFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  +       +    EK+SKS GNVI    V+   G DA+R + + 
Sbjct: 546 KVLYDLGVVSTKEPFQRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++  G++    +   N +  LV    +   K  D             E++L
Sbjct: 606 LGPLEQVKPWNTHGIEGI--SRFLNKVWRLVWDENTETQKTTDDKPS---------EAVL 654

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ +    + A+++++ LV+E+ +                        +
Sbjct: 655 KRMHKAIKKVTEDTEQLKFNTAISEMMVLVNELTK--------------------TGCYS 694

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E    L +LL  F P +  +++  L   +
Sbjct: 695 RETTETLLVLLSPFAPHITEELWQTLGHTE 724


>gi|119719242|ref|YP_919737.1| valyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524362|gb|ABL77734.1| valyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 809

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 125/374 (33%), Gaps = 21/374 (5%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           T    W+  +    I K  +    +  +E    +           Y    N V  ++ + 
Sbjct: 342 TVGTCWRCHTPVEIIPKKQWFVRSTALNEKVLEEGRKVNWVPSYMYKRLENWVLSLDWDW 401

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
              R   +   +  YY       L +      I        D     K    G K     
Sbjct: 402 VISRQRLFATPIPVYYCKDCGAELVVPPEKLPIDPR----FDPPPFEKCPKCGSKNIVPE 457

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + +M  W+D+        G+ DN      + +PADL   G DI+R     +      L  
Sbjct: 458 RDVMDTWMDSSITAAVHAGWPDNF---DERLFPADLQPNGYDIIRTWDYYLILRGVALFG 514

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                  + +       G  + KS GN +   EV+E+ G D+ R ++    A G+D  + 
Sbjct: 515 RSQFKTALINGMVRGTDGRMMHKSYGNYVAVQEVLEKYGADSFRLWVALAAATGQDVRFS 574

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            DG+           + NL   +   I    D      G  + +D  IL   +  +  + 
Sbjct: 575 WDGVD--YAHRFLVKVWNLARLASPFIE---DVREVPLGNLSHADHWILRELASTVTRVT 629

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++N     A   ++        D Y +A K   L +++        Y    V+ +   
Sbjct: 630 QALENYNFQEASQALVDFTWHKLADHYVEAVKH-RLSRSDE----AAKYTLYVVLIKTLQ 684

Query: 461 LLQAFVPKLANKIF 474
           +L  F P ++ +I+
Sbjct: 685 MLSVFAPHISEEIY 698



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    I T   YP+   H+G+A      D +AR+ R+ G +VLF  G D HG      
Sbjct: 37  RSRPVYVIDTPPPYPSGDLHVGNALNFSYIDFVARYKRMRGYNVLFPQGWDCHGLPTEVR 96

Query: 62  AQNA------GVTT-------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTC 106
            + A       +         + +  +   + +     L +S D     +T +  +    
Sbjct: 97  VEKAVGKRKSEMDPNEFLRLCREYTLKWIESMKAALKGLGLSIDWSTEYKTMDPDYWRRT 156

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +  + +KG IY+G +   +  R E    + EV  
Sbjct: 157 QLSFVLMYNKGLIYRGEHPVIWCPRCETAIAEAEVEY 193


>gi|162455699|ref|YP_001618066.1| leucyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|189083150|sp|A9EYY7|SYL_SORC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161166281|emb|CAN97586.1| leuS [Sorangium cellulosum 'So ce 56']
          Length = 854

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 84/233 (36%), Gaps = 10/233 (4%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y+     YP+    H+GH       D+++R+ R+ G+DVL   G D  G    + A
Sbjct: 59  RGKRYVLDMFPYPSGSGLHVGHPEGYTATDIMSRYFRMRGIDVLHVMGWDAFGLPAEQHA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N   F+    +L  SYD    + TT+ R+    + ++ ++  KG  Y
Sbjct: 119 LETGTHPADTTARNIATFKRQLKMLGFSYDWSRELSTTDPRYVRWTQWIFLQLFKKGLAY 178

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   S  +         ++EV  G          +PV       +  R++AY D+L    
Sbjct: 179 QDEVSVNWCPALGTVLANEEVIDGKS----ERGSHPVYRTPLRQWMLRITAYADRLAEDL 234

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLS---LSRKTFDWGIKIPDDPQYIMYV 230
                    +  +   I   +  L         +         PD    + YV
Sbjct: 235 RLLDWPEGTVAMQRSWIGRSEGALITFEVKGWGKGALSVFTTRPDTLMGVTYV 287



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 51/301 (16%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW----PA 258
           G    ++  + F    K        M  W  +   YL      ++ +      +    P 
Sbjct: 522 GPLARAVDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFLDPQNDAEPFSEAAYDAWMPV 581

Query: 259 DLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNV 310
           DL+V G +    H +Y   +              P  K V     +    EK+SKS GNV
Sbjct: 582 DLYVGGAEHGVLHLLYARFWHKVLYDLGHVKHPEPFAKLVHQGMILGEDNEKMSKSRGNV 641

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I+P +++   G D LR + +                 K   +    G+     R  +   
Sbjct: 642 INPDDIVRAHGADVLRMYEMFMGPL---------EAVKPWQSGQIQGVVRFRDRVFATCT 692

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           +     +         D++      R ++++  +++    + A++ ++  V+        
Sbjct: 693 RPLSDAM---------DDATSRQLHRTIKKVTGDIEGMAFNTAISAMMVFVNH------- 736

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                         S++     E + +L +L+  F P LA +++  L   + +  ++   
Sbjct: 737 -------------LSSLPSPPREAVLRLILLVSPFAPHLAEELW-RLTGHERSLSYEPWP 782

Query: 491 Q 491
            
Sbjct: 783 T 783


>gi|94311566|ref|YP_584776.1| valyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93355418|gb|ABF09507.1| valyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 955

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 119/370 (32%), Gaps = 59/370 (15%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H       +  N  ++  +   +  + +  +  
Sbjct: 406 PENWISTYNQWLSNIQDWCISRQLWWGHQIPAWYDDAGNCFVARTEEEARAKAQAAGSTG 465

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
                    + ++  W  +     ++ G+ +N       F P+ + V G DI+ F    +
Sbjct: 466 A----LRREEDVLDTWFSSALVPFSSLGWPENTP-EIQHFLPSSVLVTGYDIIFFWVARM 520

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P             +G+K+SKS GN +DP+++I+               
Sbjct: 521 VMMTKHFTGKVPFHTVYVHGLVRDSEGKKMSKSEGNTLDPVDLIDGIALEPLLKKRTTGL 580

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+        G++  +D    +     +  N
Sbjct: 581 RRPKDAPKIESKTKKEFPDGIPAFGADALRFTFASLATLGRNINFDTGRCEG--YRNFCN 638

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA---------FTESDESILSVCSRVLQEIRENMQN 407
            + N  +R V M  + +D  +              F+++D  I+S+  RV  E+ +    
Sbjct: 639 KLWN-ATRFVLMNTEGHDCGMGPCNNDCGPDGYLHFSQADRWIVSLLQRVEAEVEKGFAE 697

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
                  + +   V +   D Y +  K      T   + +T     + V+  +  L    
Sbjct: 698 YRFDNIASAIYKFVWDEYCDWYLEMAKVQIQTGTEAQQRAT-RRTLLRVLETVLRLAHPI 756

Query: 466 VPKLANKIFD 475
           +P +  +++ 
Sbjct: 757 IPFITEELWQ 766



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 59/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D L R  R+ G + L+  GTD  G       
Sbjct: 38  NRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMRGANTLWVPGTDHAGIATQIVV 97

Query: 63  Q--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +               A  T KV+  +       +R  R M   +D + + F  T     
Sbjct: 98  ERQLEAQGVSRHDLGRAKFTEKVWEWKEESGSTITRQVRRMGASIDWTREYF--TMSPEM 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ ++ ++G IY+G     +        +D EV    +       H P+
Sbjct: 156 SKAVTEVFVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVEEDGSLWHIHYPL 210


>gi|119961299|ref|YP_948111.1| valyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119948158|gb|ABM07069.1| putative valyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 873

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 97/252 (38%), Gaps = 8/252 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W  +        G+  + D   +K +P DL   G DI+     +    A  L  N 
Sbjct: 518 VLDTWATSSLTPQIVGGWSRDED-LFSKVYPFDLRPQGHDIIRTWLFSSAVRADALQKNA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P +V+ E G DA+RY+       G D  Y  +
Sbjct: 577 PWKHAAISGWILDPDRKKMSKSKGNVVVPTDVLNEYGSDAVRYW-AASAKLGADTAY--E 633

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRE 403
             + ++   LA  + N     +++   +   +       T   D ++L+  S V+ +  +
Sbjct: 634 IAQMKIGRRLAIKLLNASKFVLNLGATENSVVTSDLSVLTNPLDRALLAQLSDVVAQSTK 693

Query: 404 NMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +N    RAL    S      D Y +  K            ++VL      +  L  L 
Sbjct: 694 AFENYDYARALQITESFFWQFTDDYVELIKDRAYGAAGEAEQASVLAALATTLDSLLRLF 753

Query: 463 QAFVPKLANKIF 474
             F+P    +++
Sbjct: 754 APFLPFATEEVW 765



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 39/167 (23%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DV AR+ R+ G +V +  G D++G    +
Sbjct: 47  TTREQVYSIDTPPPTASGSLHVGHMFSFTQTDVQARYMRMTGKNVFYPMGWDDNGLPTER 106

Query: 61  AAQN-------------AGVTT-----------------------KVFVDQNSRNFRDMA 84
             QN             A  T                        +    ++ + F ++ 
Sbjct: 107 RVQNYYGVRCDPAIPYKADYTPPAQPAKNQRDFDVVSRQNFIELCEELAVEDEKVFENLF 166

Query: 85  DVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
             L +S  +D   RT +       +  +      GD Y       + 
Sbjct: 167 QTLGLSVDWDLTYRTIDDTSRAVSQRAFLANLSAGDAYMAEAPTLWD 213


>gi|115688442|ref|XP_001200958.1| PREDICTED: similar to valyl-tRNA synthetase 2 [Strongylocentrotus
           purpuratus]
 gi|115730955|ref|XP_781671.2| PREDICTED: similar to valyl-tRNA synthetase 2 [Strongylocentrotus
           purpuratus]
          Length = 1119

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 80/417 (19%), Positives = 135/417 (32%), Gaps = 93/417 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  +F + S    + L   E+    I+P     +      + ++D 
Sbjct: 521 PICSRSGDIVEPLLKSQWFVKCSEMGQRALRSVETGELKIVPAVYH-KTWRHWLANVRDW 579

Query: 208 SLSRKTFDWGIKIP--------DDPQYIM----YVWIDALTN------------------ 237
            +SR+   WG +IP         DP  +M      W+   T                   
Sbjct: 580 CISRQ-LWWGHRIPAYRVEIQGMDPADMMVNINDCWVSGHTEGEARDKASRKYGVDAHRI 638

Query: 238 -----------YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
                      +  T  Y         +++P+ +   G DIL F    +      L+  L
Sbjct: 639 SLTQGQLEFMLWHATLYYSFWQTPDLQEYYPSSVLETGYDILFFWVARMVMMGQQLTGEL 698

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI--------------------------- 317
           P  K           G K+SKSLGNVIDP++VI                           
Sbjct: 699 PFHKVYLHSMVRDAHGRKMSKSLGNVIDPLDVISGVSLEQLQSSLLHGNLKLDPKELKVA 758

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DALR+ L    + G+D   +   + +       N I N    +
Sbjct: 759 MKGQRSDFPQGIPECGTDALRFALASYNSQGQDINLNVGQVLE--YRHFCNKIWNASKFA 816

Query: 366 VSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
           +S   KD+          + T  D  IL   +  +Q   +   +  +      +      
Sbjct: 817 LSAFEKDFSPQPIDEVLRSATPVDLWILHKLATTIQACHKGFNDVDLPMVTTALYRFWVH 876

Query: 422 SEVDRYFD-AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  D Y +  ++P  L KT  +   T   V   VI     L+   +P L  ++F  L
Sbjct: 877 NLCDVYLECIKEP--LNKTQTEECKTSANVLHTVIDGALRLMHPIMPFLTEELFQRL 931



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 23/165 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++E+E   +           H+GH     I D L R+ R+ G+  L+  G D  G     
Sbjct: 193 VEEKEPFVMCLPPPNVTGVLHLGHTLTTTIQDSLIRWKRMVGVPSLWIPGCDHAGIATQV 252

Query: 61  AAQNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTE 99
             +      K    Q                       +  R +   LD   D+F  T +
Sbjct: 253 VVEKQIHHEKGITRQDMGREEFIKEVWRWKEEKGGEIYQQLRQLGASLDWDRDNF--TMD 310

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++     R  + ++ D G IY+      +S    +  +D EV + 
Sbjct: 311 QKFSHAVREAFVRLHDDGIIYRSSQLVNWSCTLNSAISDIEVDQM 355


>gi|187478838|ref|YP_786862.1| valyl-tRNA synthetase [Bordetella avium 197N]
 gi|115423424|emb|CAJ49958.1| valyl-tRNA synthetase [Bordetella avium 197N]
          Length = 961

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 73/534 (13%), Positives = 147/534 (27%), Gaps = 86/534 (16%)

Query: 36  RFHRLDGLDVLFTTG-------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  L G  V             D+                  F D       D+  ++ 
Sbjct: 264 RYQHLIGKQVELPLCNRNIPIIADDFVDPAFGTGCVKITGAHDFNDYACALRHDLPLIVI 323

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            + D  I                + +   ++ +  Y              D      +  
Sbjct: 324 FTLDAHINENGPEQFRGLERYEARKAVVAELEEKGYLVKIEPHKMMQPKGDRTGVVLEPM 383

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +     +     EG      +  +  L           P        +   + ++D  
Sbjct: 384 LTDQWFVAMSRPAPEGTLNPGKSITEVALEAVADGRIQFYPENWT-TTYNQWLNNIQDWC 442

Query: 209 LSRKTFDWG--IKIPDDPQY-----------------------------IMYVWIDALTN 237
           +SR+   WG  I                                     ++  W  +   
Sbjct: 443 ISRQ-LWWGHQIPAWYAEDGQCFVALSEDDALEQARAAGVTGPLTRDADVLDTWFSSALV 501

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
             TT G+ +      A++ P+ + V G DI+ F    +      ++ ++P          
Sbjct: 502 PFTTLGWPEKTA-DLARYLPSSVLVTGFDIIFFWVARMVMLTMHMTGSIPFKHVYVHGLI 560

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE------------------------------------ 319
               G+K+SKS GN +DP+++I+                                     
Sbjct: 561 RDADGQKMSKSKGNTLDPVDLIDGIDLEQLVTKRTFGLMNPKQAGAIEKATRRQYADGIP 620

Query: 320 -VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G DALR+ +      G++  +D    +     +  N + N  +R V M  + +     
Sbjct: 621 AFGTDALRFTMAAYATLGRNINFDLKRCEG--YRNFCNKLWN-ATRFVLMNTEGHALHGA 677

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
             G  + +D  I+S    +  E+     +         +   V +   D Y +  K    
Sbjct: 678 EQGELSFADRWIVSQLQALETEVERGFADYRFDNVANALYRYVWDEYCDWYLELAKVQIQ 737

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             T   +  T     + V+  +  L    +P +  +++  + V    R     D
Sbjct: 738 TGTPAQQLGT-RRTLIRVLEVVLRLAHPIIPFITEELWQKVSVVAGKRDAGKTD 790



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 18/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           H+GHA+   I D L R+HR+ G D +F  GTD  G      
Sbjct: 47  TDPKPYCIQFPPPNVTGTLHMGHAFNQTIMDGLIRYHRMSGDDTVFIPGTDHAGIATQIV 106

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +Q+     +    L  S D      T ++R  
Sbjct: 107 VERQLDAQKLSRHDLGRERFVEKVWEWKEQSGNTITNQVRRLGASADWPREYFTMDERMS 166

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
                 + ++  +G IY+G     +  +
Sbjct: 167 RGVAETFVQLYRQGLIYRGKRLVNWDPK 194


>gi|170291002|ref|YP_001737818.1| valyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175082|gb|ACB08135.1| Valyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 775

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 123/388 (31%), Gaps = 54/388 (13%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             +                 P++ +    Y+ +   +  +L +Y   +     P    N 
Sbjct: 329 LLERVEDIIHRTPVCWRCKTPLEIIPMREYYLKQVDFIKELENYL--NTVRFYPEWSSNY 386

Query: 196 VISFVKSGLKDLSLSRKTFD------WGIKIPDDPQ------------------------ 225
              +++S   D  +SR+ +       W  K    P                         
Sbjct: 387 WREWLRSISSDWPISRRRYYATEIPVWYCKKCGKPVLPSPGRYYRPWKDEPPFDKCPHCG 446

Query: 226 ---------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI--LRFHAIY 274
                     +   W D+  + L   GYL N D  K    P+DL   GKDI     H  +
Sbjct: 447 SSEGFEGETRVFDTWFDSSISPLVYNGYLWNDDIFKKLG-PSDLRPQGKDIVRTWLHYTF 505

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +           S   +  +G  + KSLGNVI P  + E+ G DA+R+F   E  
Sbjct: 506 LRVHQILGRQAFKHVWLSGMGLDAQGRAMHKSLGNVIYPWPLFEKYGADAVRFFGAAEAH 565

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            G D    +  ++       A      +      I +  +           +D  IL   
Sbjct: 566 HGSDLRISERKIEG------AYKFLQKLWNVARFISQFEEPEGRV--DLQPADLWILGRL 617

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTVLYVTV 452
           +R ++      +N        +V S V +V    Y +  K       +   A +  +   
Sbjct: 618 NRAIERALNGYRNFDFFDPANEVRSFVWDVFAPHYIELVKERAYGIGDEGEAKSARWTLH 677

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVA 480
           +V+R +  L    +P + + I+  ++  
Sbjct: 678 QVLRAVLKLSAPIIPHITDYIWRQIYGG 705



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I T   Y + + HI  A      D++AR  R+ G +V F  G D +G  +   
Sbjct: 35  TEKPTFSIDTPPPYASGKWHIAAAIHYSQIDMIARTMRMMGYEVYFPLGIDRNGLPVEVE 94

Query: 62  AQNAGV-----TTKVFVDQNSRNFRD--------MADVLDISY--DDFIRTTEKRHHDTC 106
            +           +    +  R F D        +   L IS+  + + +T  +      
Sbjct: 95  TEKRYKIRMFEYPREEFIKLCREFLDEAEQDIVSITKRLGISFTTEQYFQTDSELWRMVT 154

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  +    +KG IY+      Y  R      D EV               V+  +E+
Sbjct: 155 QATFIDAWNKGFIYEDYRPNVYCPRCRTTLADAEVEYSEIPTKLVYLRFGVEGSDEK 211


>gi|326567377|gb|EGE17492.1| valyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 975

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 127/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPNGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+        G+D  +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLAGTGRDINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASGQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++ D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVRLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|323477379|gb|ADX82617.1| valyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 842

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 28/325 (8%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +      +     E  LPI+         K  L  L L   T             +  V
Sbjct: 452 PFWYCENGHLTPAREKDLPIDPIKTNPPSEKCQLCGLHLKPVT------------DVADV 499

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           WID+    L  T + ++ +    K +PA L + G DI+R    Y  +   +L+ N+P   
Sbjct: 500 WIDSSVTVLFLTKFYEDKNV-FNKTFPASLRLQGTDIIRTWLFYTFFRTLMLANNIPFTT 558

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +K 
Sbjct: 559 VLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIVKG 617

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +    L   + N        I    +  +  P +    D+ IL    + + +     +N 
Sbjct: 618 K--RMLLQKLWNASRLVYPFIA---NQRLDKPESLHIVDKWILQEHKKFVIKAINAYKNY 672

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +  L ++ S   E   D Y +  K   L + +     T+      +IR + +LL    
Sbjct: 673 DFYLVLQELYSYFWEIIADEYLEMIKH-RLFEDDKSAKYTIQR----IIRDIIVLLHPIA 727

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  LF   ++   + L +
Sbjct: 728 PHITEEIYSRLFGYKKSILLEELPK 752



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       
Sbjct: 75  KSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQGLPTELKV 134

Query: 63  QNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRI 108
           Q      K            + +   +  ++    L     ++ F  +T E ++    + 
Sbjct: 135 QYRLGIPKDNRQLFLQKCIEWTEDMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQK 194

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +     I        +  + E      EV  
Sbjct: 195 SLIDMYKTNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|323474647|gb|ADX85253.1| valyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 842

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 28/325 (8%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +      +     E  LPI+         K  L  L L   T             +  V
Sbjct: 452 PFWYCENGHLTPAREKDLPIDPIKTNPPSEKCQLCGLHLKPVT------------DVADV 499

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           WID+    L  T + ++ +    K +PA L + G DI+R    Y  +   +L+ N+P   
Sbjct: 500 WIDSSVTVLFLTKFYEDKNV-FNKTFPASLRLQGTDIIRTWLFYTFFRTLMLANNIPFTT 558

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +K 
Sbjct: 559 VLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIVKG 617

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +    L   + N        I    +  +  P +    D+ IL    + + +     +N 
Sbjct: 618 K--RMLLQKLWNASRLVYPFIA---NQRLDKPESLHIVDKWILQEHKKFVIKAINAYKNY 672

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +  L ++ S   E   D Y +  K   L + +     T+      +IR + +LL    
Sbjct: 673 DFYLVLQELYSYFWEIIADEYLEMIKH-RLFEDDKSAKYTIQR----IIRDIIVLLHPIA 727

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  LF   ++   + L +
Sbjct: 728 PHITEEIYSRLFGYKKSILLEELPK 752



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       
Sbjct: 75  KSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQGLPTELKV 134

Query: 63  QNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRI 108
           Q      K            + +   +  ++    L     ++ F  +T E ++    + 
Sbjct: 135 QYRLGIPKDNRQLFLQKCIEWTEDMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQK 194

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +     I        +  + E      EV  
Sbjct: 195 SLIDMYKTNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|282877227|ref|ZP_06286065.1| isoleucine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300719|gb|EFA93050.1| isoleucine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 1223

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 114/309 (36%), Gaps = 42/309 (13%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-------------------------- 254
                 ++ VW D+ +       Y    D ++ K                          
Sbjct: 664 MYRESDLIDVWFDSGSMPYAQQHYPFEGDMAEGKTMRDAQDRVVTGEDARKAMVESTYHG 723

Query: 255 ------FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                 F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK 
Sbjct: 724 TPIPPAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKH 783

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGNV +P ++IE+ G DA+R++++   A   +  +D++G+ +                ++
Sbjct: 784 LGNVKNPFDMIEKYGADAVRFYMMTNSAPWDNLKFDEEGVDEVRRKFFGTLYNTYSFFAL 843

Query: 367 SMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
              +  +D        G   E D  I+S  + +++ +   +      RA   + S V++ 
Sbjct: 844 YANVDGFDPTTTHSNRGQAPEIDLWIISKLNSLIKNVETALNGYDPTRAGRMIDSFVNDD 903

Query: 424 -VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + Y   + ++ W   K       +  +     +  ++ LL  F P  A++++  L   
Sbjct: 904 LSNWYVRLNRKRFW--GKEMSADKRSAYHTLYTCLMTVSKLLAPFAPFYADRLYLDLGGK 961

Query: 481 DENRCFQSL 489
            E+   +  
Sbjct: 962 AESVHLERF 970



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+          N  P I H     I D   R+  + G  VL   G D HG  +    + 
Sbjct: 41  EQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMQGFQVLRKAGWDTHGLPVELGVEK 100

Query: 65  A----------------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
                                      +  V + +  +R + + +   +  D    T + 
Sbjct: 101 ELGINKKDIDNKDSEHYISVEDYNRKCRENVMKFTEEWRTLTEEMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ + G +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLKQLYNNGLMYKGYTIQPYSPAAGTGLSSHELNQPGC 206


>gi|227830284|ref|YP_002832064.1| valyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579109|ref|YP_002837507.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|227456732|gb|ACP35419.1| valyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228009823|gb|ACP45585.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 842

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 28/325 (8%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +      +     E  LPI+         K  L  L L   T             +  V
Sbjct: 452 PFWYCENGHLTPAREKDLPIDPIKTNPPSEKCQLCGLHLKPVT------------DVADV 499

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           WID+    L  T + ++ +    K +PA L + G DI+R    Y  +   +L+ N+P   
Sbjct: 500 WIDSSVTVLFLTKFYEDKNV-FNKTFPASLRLQGTDIIRTWLFYTFFRTLMLANNIPFTT 558

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +K 
Sbjct: 559 VLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIVKG 617

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +    L   + N        I    +  +  P +    D+ IL    + + +     +N 
Sbjct: 618 K--RMLLQKLWNASRLVYPFIA---NQRLDKPESLHIVDKWILQEHKKFVIKAINAYKNY 672

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +  L ++ S   E   D Y +  K   L + +     T+      +IR + +LL    
Sbjct: 673 DFYLVLQELYSYFWEIIADEYLEMIKH-RLFEDDKSAKYTIQR----IIRDIIVLLHPIA 727

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  LF   ++   + L +
Sbjct: 728 PHITEEIYSRLFGYKKSILLEELPK 752



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       
Sbjct: 75  KSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQGLPTELKV 134

Query: 63  QNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRI 108
           Q      K            + +   +  ++    L     ++ F  +T E ++    + 
Sbjct: 135 QYRLGIPKDNRQLFLQKCIEWTEDMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQK 194

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +     I        +  + E      EV  
Sbjct: 195 SLIDMYKTNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|225019235|ref|ZP_03708427.1| hypothetical protein CLOSTMETH_03188 [Clostridium methylpentosum
           DSM 5476]
 gi|224947866|gb|EEG29075.1| hypothetical protein CLOSTMETH_03188 [Clostridium methylpentosum
           DSM 5476]
          Length = 801

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 7/179 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K Y      YP+ Q  H+GH       D++AR  RL+G +VL+  G D  G      A 
Sbjct: 31  PKYYALVEFPYPSGQGLHVGHPRSYTALDIVARKRRLEGYNVLYPMGWDAFGLPTENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              +  ++  ++N   F+     L +S+D    + TT+  ++   + ++ ++  KG  YK
Sbjct: 91  KNHIHPEIVTEKNVARFKGQLKSLGLSFDWNREVNTTDPSYYHWTQWIFLQLFKKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
              +  +    +    ++EV  G            V   E+  +  +++ Y  +L+   
Sbjct: 151 KKMAVNWCTSCKCVLANEEVVNG----VCERCGAEVIHKEKSQWMLKITEYAQRLIDDL 205



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 117/368 (31%), Gaps = 61/368 (16%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--- 194
           +D   K  +    N +  P    +   + F    Y  + +          +P++      
Sbjct: 391 EDAKVKIIEWLKENKKGEPKVNYKLRDWVFARQRYWGEPIPIVHCEHCGAVPLDESELPL 450

Query: 195 -----EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTT 242
                +     ++G   LS      +        P       M  W         Y    
Sbjct: 451 VLPEVDSYEPTENGESPLSKLDSFVNTTCPKCGGPAKRETDTMPQWAGSSWYFLRYCDPH 510

Query: 243 GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSH 293
                       +W P D +  G +    H +Y   +              P  K+    
Sbjct: 511 NVNALAAKEALDYWLPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVSCPEPYAKRTSHG 570

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
             +   GEK+SKS GNV++P ++I+E G D +R + +      K   +    ++      
Sbjct: 571 MILGENGEKMSKSRGNVVNPDDIIKEYGADTMRLYEMFIGDFEKAAPWSSASIR------ 624

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
              G    + R  ++     DG    P         I     + ++++ E+++    + A
Sbjct: 625 ---GCKRFLDRVWNLQTCVTDGAGYRP--------EIEGEMHKTIKKVTEDIEALKFNTA 673

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           LA +++L++ +                    +    +T    R L ILL  F P L  ++
Sbjct: 674 LAAMMALLNTI--------------------TATGSITRGEFRTLLILLNPFAPHLTEEL 713

Query: 474 FDILFVAD 481
           +++L    
Sbjct: 714 YELLGYGG 721


>gi|326335912|ref|ZP_08202089.1| ehrlichia chaffeensis immunodominant surface protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691876|gb|EGD33838.1| ehrlichia chaffeensis immunodominant surface protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 878

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 124/376 (32%), Gaps = 20/376 (5%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            I++ G   +          D+ +   +E+ K A       +   +     +  +     
Sbjct: 339 YINNIGTSERTGAVVEQRPLDQWFLKMEELVKPALKAVSETEEIKLYPKRFDNTYRHWLE 398

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISF-----VKSGLKDLSLSRKTFDWGIKIPDDPQY 226
                    +      +P     E   F      +  L+         +  +      + 
Sbjct: 399 NVHDWNISRQLWWGQQIPAYYYGENKEFVVAETKEKALELARKKSHNPNLTLGDLHQDED 458

Query: 227 IMYVWIDALTNYLTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            +  W  +    ++    + +  +     ++P    V   DIL F    +    +  +  
Sbjct: 459 SLDTWFSSWLWPISVFNGILEPNNKEFKYYYPTQDLVTAPDILFFWVARMIIAGYEFAGK 518

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P      +         K+SKSLGN  D +++I++ G D +R  L+   + G D  +D+
Sbjct: 519 KPFSNVYLTGIVRDKLRRKMSKSLGNSPDALKLIKDFGADGVRVGLLLSSSAGNDLLFDE 578

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
              ++   +  AN I N    +  +I       IP P    +S E   S   +VL E  +
Sbjct: 579 ALCQQ--GSGFANKIWN----AFRLIKGWQTANIPQPDYAKKSIEWFKSKFQKVLNETED 632

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           +     I  AL +V  LV +       +  KP      +      V    + +      L
Sbjct: 633 DFNKYRISDALMKVYKLVWDDFCSWLLEIVKPTFGSPIDIQTLKEV----ITLFENNLKL 688

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +I+  +
Sbjct: 689 LHPFMPFITEEIWQQI 704



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 51/178 (28%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ER    I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 35  ERIPYTIVIPPPNVTGILHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        +  Q      +    L  S D      T +     
Sbjct: 95  VAKLKEQGILKSDLSREEFLKHAWDWTHQYGGVILEQLKKLGCSCDWERTKFTMDDNLCK 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +   ++  + +KG IY+G     +    +   +D+EV               V+  +E
Sbjct: 155 SVIKVFVDLYNKGYIYRGYRMVNWDPDAKTTLSDEEVIYKEQKGKLFYLIYKVEGSDE 212


>gi|218134173|ref|ZP_03462977.1| hypothetical protein BACPEC_02063 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991548|gb|EEC57554.1| hypothetical protein BACPEC_02063 [Bacteroides pectinophilus ATCC
           43243]
          Length = 815

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 30  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKMLHGYYVIHPMGWDAFGLPAENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV  K+    N  N +     +     +D  + TT+   +   + ++ K+   G  
Sbjct: 90  AIKTGVHPKISTASNVANIKRQIKEISAVYDWDMEVNTTDPEFYKWTQWIFVKMFKAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G         H+ V     + +  +++AY D+LL  
Sbjct: 150 YEKEMPINWCPSCKTGLANEEVVNG----CCERCHSVVTKKNLKQWMLKITAYADRLLDD 205

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 206 LDKLDWPEKVKKMQTDWI 223



 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/368 (14%), Positives = 122/368 (33%), Gaps = 68/368 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 415 YKLRDWVFSRQRYWGEPIPIVHCPDCGCVPVPEDQLPLLLPEVEKYEPTGTGESPLAAID 474

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +        P       M  W         Y+      +     KA  + P D+++ 
Sbjct: 475 EWVNTTCPCCGKPAKRETNTMPQWAGSSWYFLRYVDNKNDKELVSREKADKYLPVDMYIG 534

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH---------KGEKISKS 306
           G +    H +Y   +         +  + P  K                   K  K+SKS
Sbjct: 535 GVEHAVLHLLYSRFYTKFLHDIGVIDFDEPFKKLFNQGMICKKPDDIEKYGTKAMKMSKS 594

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           +GNV+ P  ++ + G D+LR + +       D  +D  G+         +G+   ++R  
Sbjct: 595 MGNVVSPDTLVNDYGCDSLRMYELFVGPPETDAEWDDRGI---------DGVRRFITRFW 645

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +++ ++    +P     T        +  +++ +I E +++  ++  ++  +      ++
Sbjct: 646 NLVHENAGKNVPETDECT-------KLQHKMVHDITERLESFSLNTVISGFMEYN---NK 695

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---EN 483
           + +  K     K       T        +  +  LL  F P +A +++++L       EN
Sbjct: 696 FIELAK-----KQGGIDKKT--------LEIMVTLLAPFAPHVAEELWEVLGHDTSVFEN 742

Query: 484 RCFQSLDQ 491
             +   D+
Sbjct: 743 NRWPEYDE 750


>gi|160903062|ref|YP_001568643.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189082329|sp|A9BI29|SYI_PETMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160360706|gb|ABX32320.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 919

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 123/327 (37%), Gaps = 32/327 (9%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            F K   + L    +    G       + I+ VWID+ +++             + K +P
Sbjct: 492 WFEKEAKELLPNDYRCPKCGGSEFKKEEDILDVWIDSGSSF-----EAVANSREELKKFP 546

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            DL++ G D     F +  + +       P    +        +G+K+SKSLGNV++P +
Sbjct: 547 VDLYLEGSDQHRGWFQSSIFLSVAKHGIAPYESVLTHGFIKDEEGKKMSKSLGNVVNPKD 606

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I + G D LR ++        D     + L+++V           +  ++  +L + + 
Sbjct: 607 IINKYGADILRLWVASADYRM-DIKISYNILEQQVET------YRKLRNTIRFLLGNIND 659

Query: 376 MIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
             P           E D+  L     +++ + +   N   ++    + +   +     Y 
Sbjct: 660 FDPDEDSVAYEEMLEIDQWALMKLHNLIKNVTKAYDNYEFYKVHYLINNFCTIDMSSTYL 719

Query: 429 DAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           D  K     +    +   +   V  E    L  ++   +P  A ++++ L  +++   ++
Sbjct: 720 DIIKDRIYVEGKKSKLRRSAQTVLYETAIALNKMISPILPFTAEEVYEHLNYSNK---YE 776

Query: 488 SLDQRLKPGFM-------LHKTFDPIF 507
           ++   L P +        L + ++ IF
Sbjct: 777 TIFAELWPEYKENYLSEELEEKWNKIF 803



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 15/154 (9%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ-- 63
           K  +     Y N   H+G A   ++ D++ ++  L G D  +  G D HG  I       
Sbjct: 49  KFVLHDGPPYANGDIHMGTALNKVLKDIVLKYKTLRGYDAPYVPGWDTHGLPIEHNVTTK 108

Query: 64  -----------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
                            + +  +     R+    L +   +D    T +  +      + 
Sbjct: 109 LGEKANALSKLEIRKLCEDYAMKYVDIQRESFKRLGVIGFWDKPYLTLKPEYEAKVLEIL 168

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           + I + G+IY+G    ++    +    + EV   
Sbjct: 169 RSIVESGNIYRGTKPIYWCTECQTALAEAEVEYH 202


>gi|294950053|ref|XP_002786437.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239900729|gb|EER18233.1| valyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1064

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 113/366 (30%), Gaps = 52/366 (14%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS----RKTFDWGI 218
           E  +F             +      +P  +  +     +      + +    R +   GI
Sbjct: 508 ESTWFNWLENIRDWCVSRQLWWGHRIPAYKVVKPCYTEEQWFVGRNEAEALQRASEKLGI 567

Query: 219 K-----IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH-- 271
                 +  DP  ++  W  +    ++  G+ +        F+P+ +   G DIL F   
Sbjct: 568 PESDLELAQDPD-VLDTWFSSGLLPMSALGWPNMNTDDMKAFFPSSVLETGHDILFFWVA 626

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +   +  L+  LP              G K+SKSLGNVIDP+EV+  +G+  L+  L  
Sbjct: 627 RMVMMSLALTDELPFHTVCLHAMVRDAHGRKMSKSLGNVIDPLEVMSGIGLPELQEKLKH 686

Query: 332 EIACGKDGFYDKDGLKK--------------------------RVNADL-----ANGIGN 360
                ++      G +K                           VN D+          N
Sbjct: 687 GNLPEREIKKAMKGQEKDFPDGIPECGSDALRFGLLAYTGQARSVNLDINRVVSYRYFCN 746

Query: 361 LVSRSVSMILKDYDGMI-----PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +   +   L ++         P        D+ ILS  S       + ++      A  
Sbjct: 747 KLWNVMKFALPNFGDNFTSKGLPLDAKLEWEDKWILSRLSDAAGAANKGIKEFNFSDATT 806

Query: 416 QVISLV--SEVDRYFDAQK--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              +       D Y +  K     L+  + +       V    + +   LL   +P +  
Sbjct: 807 ATYNFWLYDFCDYYLELVKKRFRALEGGDSEELRIAREVLYICLDRGLRLLHPLLPFVTE 866

Query: 472 KIFDIL 477
           +++  +
Sbjct: 867 ELYQRI 872



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +K  +           H+GHA    I D + R+HR+ G   L+  GTD  G       
Sbjct: 134 DSQKFVMCLPPPNVTGTLHLGHALMCCIQDSMTRWHRMMGHQTLWIPGTDHAGIATQSVV 193

Query: 63  QN---------------AGVTTKVFVDQNSR---NFRDMAD-VLDISYDDFIRTTEKRHH 103
           +N                    +V+  +N +     + M      + +D    T +    
Sbjct: 194 ENLLLREEGLSRHDLGRERFLERVWAWKNEKGNTICKQMERLASSLDWDRQFFTMDDNLS 253

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +  + +  D+G IY+      +        +D EV  
Sbjct: 254 TAVKEAFVRFYDEGKIYRDTRLVNWCPYLRTALSDLEVDH 293


>gi|326779874|ref|ZP_08239139.1| isoleucyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326660207|gb|EGE45053.1| isoleucyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 1047

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 138/412 (33%), Gaps = 14/412 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +       +G++ +  +N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAIKDRLLQENEKTNWFPDSVKNGRFGDWLNNNVDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         +D  L+   S  E      R    +   +  + +++ +    +  
Sbjct: 455 SRNRYWGTPLPIWRCEDGHLTCVGSRAELTELTGRDQSSLDPHRPFIDEVTFTCTHENCQ 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 LEAYRVPE-VIDAWYDSGSMPFAQWGYPYKNKEVFENRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P   T  D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSGADPAPADRTVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++ ++   M+     RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LNALVDQMTVAMEGYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           V+  +  L+   VP +  +++  L         +S+     P   L    DP
Sbjct: 750 VVETVTRLMAPLVPFITERVWQDLVAPVTPDAPESVHLSTWPKADLSA-VDP 800



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMQGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAFGIAEFNAKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I +K  + +      +  R     +D E+ +G +
Sbjct: 160 VDSVWWSLKEIFNKDLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|227498594|ref|ZP_03928738.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904050|gb|EEH89968.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 934

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 98/269 (36%), Gaps = 15/269 (5%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G         IM VW D+ +++     +           WPADL++ G D     F +
Sbjct: 527 KCGGTHFRKESDIMDVWFDSGSSHRAVLNHFP------GLTWPADLYLEGSDQHRGWFQS 580

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +   +   P    +     +  +G K+SKSLGN + P ++I++ G D +R ++   
Sbjct: 581 SLLTSVATTGKAPYRAVLTHGYTLDGEGRKMSKSLGNTVAPQDIIKDYGADIVRLWV-SS 639

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESIL 391
                D    K+ +K    +++   I N +   +      D + M        E D+  L
Sbjct: 640 TDYKGDVRVSKEIIK--HVSEVYRKIRNTIRYILGNTSDFDAETMKVPFAEMEELDQWAL 697

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTNPDRASTVL 448
                + +++ +  +N   H     +     V     Y D  K      K +  +  +  
Sbjct: 698 MRLQELKKDVEKAYENYDFHVVHHAIHDFCTVDMSSFYLDIIKDRLYASKKDDKKRRSAQ 757

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               E++  L ++L   +     +++  +
Sbjct: 758 TAMYEILSDLIVMLAPILSFTMEEVYQFM 786



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 15/194 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N + H+GHA   I+ D++ ++    G D  +T G D HG  I  A   
Sbjct: 53  KKFILHDGPPYANGKIHLGHALNKILKDIILKYKYARGFDTPYTPGWDTHGMPIEHACLK 112

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                               +  +     R+    L +   +D    T +         +
Sbjct: 113 EVGVDRHKLSALELRRMCHDYALKWINIQREGFKRLGVQGDWDHPYITMKPAFEAEQIRV 172

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           + +++ KG IYKG  + ++    E    + E+              P+   +++      
Sbjct: 173 FGEMAHKGYIYKGKKTVYWCPHCETALAEAEIEYADQKTPTIYVKIPLVDAKDKAPEGAQ 232

Query: 170 SAYQDKLLSYYESH 183
                 ++      
Sbjct: 233 GKKTSMVIWTTTPW 246


>gi|311745324|ref|ZP_07719109.1| isoleucine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577859|gb|EAZ82079.1| isoleucine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 1135

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 12/270 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G K+  +P  ++ VW D+         Y    +      +PAD    G D     F  ++
Sbjct: 596 GEKMFREPD-LIDVWFDSGAMPYAQWHYPFENEDIFKANYPADYIAEGVDQTRGWFFTLH 654

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A +L  ++     + +   +   G K+SK LGN +DP + I+E G DA+R++++    
Sbjct: 655 TIAVMLFDSIAFKNVIANGLVLDKNGNKMSKRLGNAVDPFKTIKEYGPDAVRWYMLSNAN 714

Query: 335 CGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESIL 391
              +  ++ +G+ +             N  +   ++    YD     P     E D+ I+
Sbjct: 715 PWDNLKFNLEGVAEVQRRFFGTLQNTYNFFALYANLDEFVYDKSKVVPVSERAELDQWIV 774

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL-VSEV-DRY--FDAQKPWELKKTNPDRASTV 447
           S    ++ E+ E M N    +A   ++   V ++ + Y     ++ W   + N D+    
Sbjct: 775 SKLQSLIVEVEEAMDNYDATKATRAIMGFTVDQLSNWYVRLARKRFWR-GEMNADK-QAA 832

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                E +  L+ L+ +F P  ++ ++  L
Sbjct: 833 YETLYECLLSLSQLMSSFAPFYSDWLYQNL 862



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 19/143 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P I H     + D+  R+  L G  V    G D HG  +    + 
Sbjct: 51  ETFTFFEGPPSANGTPGIHHVMARTLKDIFCRYKTLQGYQVKRKGGWDTHGLPVELQVEK 110

Query: 65  AGVTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
               TK                   V +    + D+ + +   +  DD   T +  + +T
Sbjct: 111 ELGITKEDIGKKISVEEYNKKCRETVMRFKNEWDDLTEKIGYWVDLDDPYITFDSNYIET 170

Query: 106 CRILWKKISDKGDIYKGCYSGWY 128
              L K++ +KG +YKG     Y
Sbjct: 171 LWSLLKRLYEKGLLYKGYTIQPY 193


>gi|322392591|ref|ZP_08066051.1| leucine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144583|gb|EFX39984.1| leucine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLSDGTSERGGY---PVVRKPMRQWMLKITAYAERLLTD 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 105/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             ++  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFINAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|260583637|ref|ZP_05851385.1| leucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158263|gb|EEW93331.1| leucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 804

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+ Q  H+GH       DV++R  R  G +VL   G D  G    +
Sbjct: 28  KGKKNFYALDMFPYPSGQGLHVGHPEGYTATDVVSRMKRAQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+     L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNDPAEFTLKNIATFKRQIQELGFSYDWDREINTTDPNYYKWTQWIFTKLVEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV  G          +PV     + +  +++AY D+LL 
Sbjct: 148 AYEAEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVYRKPMKQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   K
Sbjct: 204 DLDDLDWPESIKDMQRNWIGRSK 226



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 112/285 (39%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-------NL 284
                Y+         D  K K W P DL++ G +    H +Y   +           N 
Sbjct: 498 WYFVRYIDPHNQEQIADPEKLKEWLPVDLYIGGAEHAVLHLLYARFWYKVLYDLGVVPNK 557

Query: 285 PLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              +K+F+ G IL +G EK+SKS GNV++P +V+ + G D LR + +          + +
Sbjct: 558 EPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDVVRQYGADTLRLYEMFMGPLDASIAWSE 617

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            GL+              + R   +++ +   +      F   D S+  +  + ++++ E
Sbjct: 618 KGLEGSR---------KFLERVWRLLVDEEGKLRDRITTFN--DGSLDKIYHQTVKKVTE 666

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    + A++Q++  V+E  +                       + V+ ++ L  LL 
Sbjct: 667 DYEALRFNTAISQMMIFVNEAYK--------------------TDALPVQYMKGLVQLLA 706

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              P L  +++  L  A E+  + +     +  F++    + IF 
Sbjct: 707 PIAPHLGEELWSKLG-ATESISYVTWPTYDEA-FLVEDEVEVIFQ 749


>gi|71997510|ref|NP_001021875.1| Leucyl tRNA Synthetase family member (lrs-2) [Caenorhabditis
           elegans]
 gi|33300376|emb|CAA98144.4| C. elegans protein ZK524.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 859

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 5/184 (2%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K YI +   YP+ + HIGH     I+D  AR++RL+G +V+   G D  G     AA++ 
Sbjct: 58  KKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYEVIHPIGWDSFGLPAENAARDK 117

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           GV  + +   N  + +       I +D    I T E       + ++ K+ + G + +  
Sbjct: 118 GVDPREWTINNIESMKQQLLKTKILFDWEKEISTCEPEFFRWTQWIFCKLFEYGLVKRTS 177

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESH 183
               +   D+     +++          A+    +  +   +      Y  +L       
Sbjct: 178 SEVNWDPIDKTVLAAEQIDNDGKSWRSGAKA---EKKKLSQWMIETPKYAKRLQEGLRKM 234

Query: 184 PEFI 187
            E  
Sbjct: 235 SEQW 238



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 25/180 (13%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N +D   +++  GVD  R  L+   A      + +  LK         GI  
Sbjct: 567 EKMSKSKNNGVDLAAILDSEGVDMTRLRLLEAAAPRAPINWGETDLK---------GIKK 617

Query: 361 LVSRSVSMILKDYD--GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH-RALAQV 417
           L+ R  ++  +  D            E D SI    +  ++ +   ++   +H  AL ++
Sbjct: 618 LLDRIAAINSQIVDARDNGKPIELKKEIDGSIKETYNFFVRNVGMCLEVLHLHNTALMRI 677

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +             LKK +P   +         ++ L I+LQ F P +A++++  L
Sbjct: 678 QGFTNA------------LKKVDPIYLAHSPE-GQRAVKSLIIMLQVFCPHVASEMWSAL 724


>gi|116252545|ref|YP_768383.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384698|sp|Q1MFI6|SYL1_RHIL3 RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA
           ligase 1; Short=LeuRS 1
 gi|115257193|emb|CAK08288.1| putative leucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 838

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 76/201 (37%), Gaps = 7/201 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y      YP+    H+GH       D++ R+ R+ G +VL   G D  G    + A
Sbjct: 30  RPKFYALDMFPYPSGAGLHVGHPLGYTATDIMCRYKRMRGFNVLHPMGWDSFGLPAERHA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV   +   +N   FR     L  SYD      TT+  +    + ++ K+ + G  Y
Sbjct: 90  MRTGVHPDITTKRNIETFRGQVQRLGFSYDWSREFATTDPAYVRWTQWIFLKLFENGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +     A   D+EV  G     Y    +PV       +  R++AY D+LL   
Sbjct: 150 QAEVAVNWCPAQNAVLADEEVKDG----RYVETGDPVIRRRMRQWMLRITAYADRLLQGL 205

Query: 181 ESHPEFILPIERRNEVISFVK 201
           +           +   I   +
Sbjct: 206 DGLDWPENLKAMQRNWIGRSE 226



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 108/315 (34%), Gaps = 74/315 (23%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +  +       ++W P DL+V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSCWYYLRFLDPENTSEPVGREAERYWMPVDLYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +S   P  +      + +H +    G                          
Sbjct: 547 KVLYDIGVVSTEEPFQRLFNQGMILAHSYRDAAGRYYAPSSVVEEEGRWFAGSVEVQRAV 606

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  NV++P +V+ + G DALR + +          +   G+          G+  
Sbjct: 607 EKMSKSQLNVVNPDDVVHQFGADALRLYEMFMGPLDAAKPWQTAGVI---------GVRR 657

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R+  ++  + DG+ P       S   +L +  + ++ +  +++    + A+++++ L
Sbjct: 658 FLERAWRIVCDESDGLSPVVLEAAPS-PQLLRLRHQTVKTVTADIEAIRFNTAVSRLMEL 716

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +    +A +P                   EV+    +LL  F P +A +++  L   
Sbjct: 717 ANALTA--EAARPR------------------EVVETFVLLLAPFAPHIAEELWSKLGHG 756

Query: 481 DENRCFQSLDQRLKP 495
            E   + S       
Sbjct: 757 -ETLTWVSWPTFDPA 770


>gi|160941122|ref|ZP_02088459.1| hypothetical protein CLOBOL_06015 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435683|gb|EDP13450.1| hypothetical protein CLOBOL_06015 [Clostridium bolteae ATCC
           BAA-613]
          Length = 1052

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/406 (12%), Positives = 125/406 (30%), Gaps = 12/406 (2%)

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           F   + +  +  C      +       +  +    +++D+   N++ +    D       
Sbjct: 389 FSAPSFEHSYPHCWRCGTPLI--YYARESWFIKMTAVKDDLIRNNNTINWVPDSIGKGRF 446

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR-K 212
            + ++ +++ G            +   E   +  +      + +S       +L      
Sbjct: 447 GDWLENIQDWGISRNRYWGTPLNIWECECGHQHSIGSIEELKSLSDNCPDEIELHRPYID 506

Query: 213 TFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
             +      + P      ++  W D+         Y           +PA       D  
Sbjct: 507 AVNIKCPKCNKPMKRVPEVIDCWFDSGAMPFAQHHYPFENKELFESQFPAQFISEAVDQT 566

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F+++   + LL    P    V     +   G+K+SKS GN +DP + +   G DA+R
Sbjct: 567 RGWFYSLLAESTLLFNKAPYENVVVMGLVLDENGQKMSKSKGNAVDPFDTLAAHGADAIR 626

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
           +F     A      Y    + +     +           +   + ++D    T       
Sbjct: 627 WFFYTCSAPWIPKRYQDKAVTEGQRKFMGTLWNTYAFWVLYANIDNFDPTRYTLEYDKLP 686

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDR 443
             D  +LS  + +++ +  ++ N  I  A   +   V ++ + Y    +     K     
Sbjct: 687 VMDRWMLSKMNSMVKTVDNSLMNYQIPEAARSLQEFVDDLSNWYVRRSRERFWAKGMEQD 746

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                      +  +A      +P +  +I+  +    +    +S+
Sbjct: 747 KINAFMTLYTALVTVAKAAAPMIPFMTEQIYQNIVRKVDGNAPESV 792



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 20/166 (12%)

Query: 1   MKEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M+E  K Y+        N +PHIGH    +I D++ R+  + G  V    G D HG  + 
Sbjct: 42  MREGCKPYVFYDGPPTANGKPHIGHVETRVIKDMIPRYRAMKGYMVPRKAGWDTHGLPVE 101

Query: 60  KAAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEK 100
              +                       K  V +    + D ++ +      D+   T + 
Sbjct: 102 LEVEKKLGLDGKEQIEQYGLEPFIKECKESVWKYKGMWEDFSNTVGFWADMDNPYVTYDN 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++     K+I DKG +YKG     Y  R     +  EV +G  
Sbjct: 162 SFIESEWWALKQIWDKGLLYKGFKVVPYCPRCGTPLSSHEVAQGYK 207


>gi|78066056|ref|YP_368825.1| valyl-tRNA synthetase [Burkholderia sp. 383]
 gi|77966801|gb|ABB08181.1| valyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 955

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 122/368 (33%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   ++  +  + +      G  + 
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARNEEEARTQAAAKGYTG-ALK 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSSLGWPNETPELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------- 319
            +  +P             +G+K+SKS GN +DPI++++                     
Sbjct: 520 FTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLDTLVAKRTTGLMNPKQA 579

Query: 320 -----------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                             G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIAAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  R   +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGSDKPEVCGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                + +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNIASSIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G        
Sbjct: 37  RPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 60  ---------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                          +         K       +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKEKSGSTITGQVRRLGASPDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|71908698|ref|YP_286285.1| valyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|90103535|sp|Q47BG6|SYV_DECAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71848319|gb|AAZ47815.1| valyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 943

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 122/377 (32%), Gaps = 65/377 (17%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P  W+     +             +  H    +P    +    FV     +         
Sbjct: 392 PENWVNTYNQWLNNIQDWCISRQLWWGHQ---IPAWYGDNGQIFVAHSEAEAKAEAAKQG 448

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA-----KFWPADLHVIGKDILRF 270
           +   +  D   ++  W  +     +T  +  +     A     ++ P+ + V G DI+ F
Sbjct: 449 YTGTLKRDED-VLDTWFSSALWPFSTLDWTGDEAIDAANPLLKQYLPSSVLVTGFDIIFF 507

Query: 271 H--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---------- 318
               +      ++  +P             +G+K+SKS GNV+DPI++I+          
Sbjct: 508 WVARMVMMTKQITGQIPFKHVYVHGLIRDGEGQKMSKSKGNVLDPIDLIDGIGLEALIEK 567

Query: 319 ---------------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
                                        G DALR+      + G+D  +D +       
Sbjct: 568 RTTGLMNPKQAESIAKKTKKEFPEGIASFGTDALRFTFASLASPGRDIKFDLNRCDG--Y 625

Query: 352 ADLANGIGNLVSRSVSMILKDYD-----------GMIPTPGAFTESDESILSVCSRVLQE 400
            +  N + N  +R V M ++ +D                P  F+ +D  I+S   RV QE
Sbjct: 626 RNFCNKLWN-ATRFVLMNVEGHDLALEHQQNGPACGGSAPLEFSFADRWIVSQLQRVEQE 684

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + ++  +         +   + +   D Y +  K  E++  N  +        V  +  +
Sbjct: 685 VEQHFTDYRFDLIAQAIYKFIWDEFCDWYLEIAKV-EIQTGNDAQQRGARRTLVRTLEAV 743

Query: 459 AILLQAFVPKLANKIFD 475
             L    +P +  +++ 
Sbjct: 744 LRLAHPLIPFITEELWQ 760



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            + +   I           H+GH +   I D L R++R+ G + L+  GTD  G      
Sbjct: 33  SKADNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYYRMRGHNTLWQPGTDHAGIATQIV 92

Query: 60  -----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKR 101
                            +         K +     ++  R M    D   + F  T +  
Sbjct: 93  VERQLDAQGISRHDLGREKFLEKVWEWKEYSGNTITKQMRRMGTSPDWKRERF--TMDAG 150

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +      + ++ ++G IY+G     +  +     +D EV +  +  +      P+
Sbjct: 151 LNKVVTETFVRLFNEGLIYRGKRLVNWDPKLNTAVSDLEVVQEEEDGFMWHIRYPL 206


>gi|227827596|ref|YP_002829376.1| valyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584800|ref|YP_002843302.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238619754|ref|YP_002914580.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|227459392|gb|ACP38078.1| valyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019850|gb|ACP55257.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238380824|gb|ACR41912.1| valyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 842

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 28/325 (8%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +      +     E  LPI+         K  L  L L   T             +  V
Sbjct: 452 PFWYCENGHLTPAREKDLPIDPIKTNPPSEKCQLCGLHLKPVT------------DVADV 499

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           WID+    L  T + ++ +    K +PA L + G DI+R    Y  +   +L+ N+P   
Sbjct: 500 WIDSSVTVLFLTKFYEDKNV-FNKTFPASLRLQGTDIIRTWLFYTFFRTLMLANNIPFTT 558

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +K 
Sbjct: 559 VLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIVKG 617

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +    L   + N        I    +  +  P +    D+ IL    + + +     +N 
Sbjct: 618 K--RMLLQKLWNASRLVYPFIA---NQRLDKPESLHIVDKWILQEHKKFVIKAINAYKNY 672

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +  L ++ S   E   D Y +  K   L + +     T+      +IR + +LL    
Sbjct: 673 DFYLVLQELYSYFWEIIADEYLEMIKH-RLFEDDKSAKYTIQR----IIRDIIVLLHPIA 727

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  LF   ++   + L +
Sbjct: 728 PHITEEIYSRLFGYKKSILLEELPK 752



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       
Sbjct: 75  KSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQGLPTELKV 134

Query: 63  QNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRI 108
           Q      K            + +   +  ++    L     ++ F  +T E ++    + 
Sbjct: 135 QYRLGIPKDNRQLFLQKCIEWTEDMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQK 194

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +     I        +  + E      EV  
Sbjct: 195 SLIDMYKTNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|312215591|emb|CBX95543.1| similar to valyl-trna synthetase [Leptosphaeria maculans]
          Length = 1092

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 114/356 (32%), Gaps = 49/356 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +    +  Y    E         + ++           +++       +  D 
Sbjct: 551 WCLSRQLWWGHQIPAYLVKFEGEAHSSDNEKWVTGRTEEEAHQKAAKEFPGKKFTLERDE 610

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+         K +P  +   G DIL F    +   +  L+ 
Sbjct: 611 D-VLDTWFSSGLWPFSTLGWPKQTH-DLEKLFPTSVLETGWDILPFWVARMIMMSLHLTG 668

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P   +VF H  I   +G K+SKSLGNV+DP++++                        
Sbjct: 669 KVPF-NEVFCHSLIRDSEGRKMSKSLGNVVDPVDIMDGITLQKLHDQLTAGNLDPKELKT 727

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR  L+     G D  +D + +         N I      
Sbjct: 728 AEKYQKTAFPQGIPECGADALRMALIGYTTGGGDISFDVNVI--HGYRRFCNKIYQATKY 785

Query: 365 SVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            +  +         T  G  T  +  IL   +   ++I E+++ +    A         E
Sbjct: 786 VLGRLGDFTPRATITKTGNETLPERWILHKLTTSAKKINEHLEAREFSLATQVAYRFFYE 845

Query: 424 --VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D Y +  K    + T  ++  +        I     ++  F+P L  +++  L
Sbjct: 846 SLCDTYIENSKAIFDEGTEAEK-ESAKQTLYTAIEGGLTMIHPFMPFLTEELWQRL 900



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 46/145 (31%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  I         + H GHA    + DV+ R+HR+ G   L+  G D  G       +  
Sbjct: 170 KFVIPIPPPNVTGKLHCGHALATALQDVMIRWHRMKGFTTLYLPGCDHAGIATQSVVEKM 229

Query: 66  GV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                               T  + ++  ++       +  S+D      T +       
Sbjct: 230 LWRREKKTRYDLGRKAFIERTMDWKEEYHQHLTHTLKRMGGSFDWTREAFTMDANLSHAV 289

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              + K+ + G IY+      + ++
Sbjct: 290 TESFVKMHEDGLIYRSNRIVNWCVQ 314


>gi|306825946|ref|ZP_07459284.1| leucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431878|gb|EFM34856.1| leucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 833

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLHD 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +    TE++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIATENNGALDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEEVWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|326203941|ref|ZP_08193803.1| leucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986039|gb|EGD46873.1| leucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 814

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 73/200 (36%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+    H+GH Y   + D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGANLHVGHWYNYGLTDSWARMKRMQGYNVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    +N          +     +D  I+T    ++   + L+ ++  KG  Y+
Sbjct: 90  KTGIHPQDSTLKNIETMEGQLKEMGATFDWDYEIKTCMPDYYKWTQWLFLQLYKKGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +  +      +++V  G            V   +   +FF+++ Y  +LL   +
Sbjct: 150 KNAPVNWCPKCNTVLANEQVVDG----CCERCDTEVTKRDLTQWFFKITNYAQELLDKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
           +        + +   I   +
Sbjct: 206 TIDWPEKTKKIQTNWIGRSE 225



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 100/295 (33%), Gaps = 37/295 (12%)

Query: 213 TFDWGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
               G     DP     ++   W   L    +             K  P D +V G +  
Sbjct: 475 CPKCGAPAKRDPDTLDTFVCSSWY-YLRYPDSQNNDKPFDTEWINKMLPVDKYVGGAEHA 533

Query: 269 RFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
             H +Y             L+ + P    V     +   G ++SKS GN I P + + + 
Sbjct: 534 AMHLLYARFITKALRDLGFLNFDEPFLSLVHQGTILGPDGNRMSKSRGNTISPDDYVRKY 593

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D  R +L         G +  DG+K          I    SR   ++    +      
Sbjct: 594 GSDIFRMYLGFGFNYVDGGPWSDDGIKA---------ISRFASRIERLVESLAEQKSKAS 644

Query: 381 -GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + D+ +  V    ++ + ++      + ++++ + LV+ + +Y    K   +K  
Sbjct: 645 RTDMDKDDKELNYVRHTAIKGVTQDTDRFQFNTSISRCMELVNALYKYDAEVKTKNIK-- 702

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                     +  E I+ L  L+  F P  A ++++ L       N+ +   D++
Sbjct: 703 ----------LFEETIKDLVKLVSPFAPHFAEEMWEQLGFEYSVFNQNWPEFDEK 747


>gi|146319735|ref|YP_001199447.1| leucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145690541|gb|ABP91047.1| Leucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 839

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 36  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 96  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 156 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 213 LEEVDWPESIKDMQRNWI 230



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 105/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +       + P D+++ G +    H +Y   + 
Sbjct: 493 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 552

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 553 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHMETGEELEQ 612

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 613 APAKMSKSLKNVVNPDDVVEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 664

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E++++   + A+AQ++
Sbjct: 665 -KFLDRVYRLLT--------TKELVAENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLM 715

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  L 
Sbjct: 716 IFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQGLA 755

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 756 NTGQSISYVAWPT 768


>gi|257466462|ref|ZP_05630773.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 931

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           +         Q       PV + EE G        ++       +H    +  E  +  +
Sbjct: 452 ETRPDWCISRQRVWGVPIPVFYNEETG--------EEIFNQDILNHVISFVEKEGSDAWL 503

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                 L      +K    GI +  +   IM VW D+ +++             +   WP
Sbjct: 504 LHTSEELIGEENLKKYHLEGISLRKETN-IMDVWFDSGSSHRAVLE------TWEGLRWP 556

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F      +       P  K +        KGEK+SKS GNV+ P +
Sbjct: 557 ADLYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVNDGKGEKMSKSKGNVVAPEK 616

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I++ G D LR +    +   +D     + +K+             V  +   IL +  G
Sbjct: 617 IIKQYGADILRLWCA-SVDYREDVKISDNIVKQMAET------YRRVRNTARYILGNSYG 669

Query: 376 MIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
             P   A       E D+  L     + + + E+ +    +    ++     +     Y 
Sbjct: 670 FDPKKDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYL 729

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K     +K +     +   V +E++  L  ++   +   A +I++ L
Sbjct: 730 DIIKDRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHL 779



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   +     Y N   HIGHA   I+ D++ ++  L G    +  G D HG  I   
Sbjct: 46  KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTC 106
                 +        +  +  ++     +DI  ++FIR            T + +     
Sbjct: 106 VMEKLGSKAKDMTALEIRQLCKEYALKWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQ 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++ ++   G I+KG    ++S   E    + E+   
Sbjct: 166 LQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH 203


>gi|240146704|ref|ZP_04745305.1| leucine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201135|gb|EEU99419.1| leucine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291536292|emb|CBL09404.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Roseburia intestinalis M50/1]
 gi|291538835|emb|CBL11946.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Roseburia intestinalis XB6B4]
          Length = 805

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 16/255 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D++AR  R+ G +VL+  G D  G      
Sbjct: 31  SKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRMQGYNVLYPMGWDAFGLPTENY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +  K+  + N + F++    L  S+  D  I TT+  ++   + ++ K+   G  
Sbjct: 91  AIKNKIHPKIVTENNVKRFKEQLHSLGYSFDWDREINTTDPSYYKWTQWIFLKLFKAGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +    ++EV  G           PV    +  +  +++ Y +KLL  
Sbjct: 151 YKKEMPINWCTSCKVGLANEEVVNG----VCERCGAPVVRKVKSEWMLKITDYAEKLLEG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
                        +   I   +             D+ I   +D   +     D L    
Sbjct: 207 LNDVDYIERVKVSQKNWIGKSQG---------AEVDFAIAGKEDKLRVYTTRCDTLFGAT 257

Query: 240 TTTGYLDNPDGSKAK 254
                 ++P   K K
Sbjct: 258 YMVVSPEHPIIDKYK 272



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 109/343 (31%), Gaps = 61/343 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +PI+           E      +G   L+   
Sbjct: 420 YKLRDWVFSRQRYWGEPIPIVHCDKCGYVPIDESELPLMLPEVESYMPTDNGESPLAAMT 479

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y               K+W P D +  
Sbjct: 480 DWVNTTCPCCGGPAKRETDTMPQWAGSSWYFLRYTDPHNDEALASPEALKYWMPVDWYNG 539

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +   GEK+SKS GNV++P +
Sbjct: 540 GMEHTTLHLLYSRFWHKFLYDEKVVPCPEPYQKRTSHGMILGENGEKMSKSRGNVVNPDD 599

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ E G D LR + +   A      + +DG+K         G    + R   +       
Sbjct: 600 IVREYGADTLRTYEMFIGAFDLSASWSEDGVK---------GCRRFLERVWKL------- 643

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                   T   + + +   + ++++  + +N   + A+A +++L++E  +         
Sbjct: 644 -QDIMTEETGYSKELETKMHQTIKKVSSDYENLKYNTAIAAMMALINEFYK--------- 693

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                    + V     E    L ILL    P +  +++ I+ 
Sbjct: 694 --------KNAVTKGEYE---TLLILLNPVAPHITEELWQIIG 725


>gi|220912903|ref|YP_002488212.1| valyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859781|gb|ACL40123.1| tRNA synthetase valyl/leucyl anticodon-binding [Arthrobacter
           chlorophenolicus A6]
          Length = 872

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 94/252 (37%), Gaps = 8/252 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W  +        G+  +      K +P DL   G DI+     +    A  L    
Sbjct: 518 VLDTWATSSLTPQIVGGWSRDET-LFNKVFPFDLRPQGHDIIRTWLFSSAVRADALQKTA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P +V+ E G DA+RY+       G D  Y  +
Sbjct: 577 PWKHAAISGWILDPDRKKMSKSKGNVVVPTDVLNEYGSDAVRYW-AASAKLGADTAY--E 633

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRE 403
             + ++   LA  + N     +++   +   +       T   D ++L+  S V+ +  +
Sbjct: 634 IAQMKIGRRLAIKLLNASKFVLNLGATENSVVSADLSVLTNPLDRALLAQLSDVVAQATK 693

Query: 404 NMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +N    RAL    +      D Y +  K            ++VL      +  L  L 
Sbjct: 694 AFENYDYARALQLTETFFWQFTDDYVELIKDRAYGAAGEAEQASVLAALATTLDTLLRLF 753

Query: 463 QAFVPKLANKIF 474
             F+P    +++
Sbjct: 754 APFLPFATEEVW 765



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DV AR+ R+ G +V +  G D++G    +
Sbjct: 47  TTREQVYSIDTPPPTASGSLHVGHMFSFTQTDVQARYMRMTGKNVFYPMGWDDNGLPTER 106

Query: 61  AAQN 64
             QN
Sbjct: 107 RVQN 110


>gi|146321931|ref|YP_001201642.1| leucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145692737|gb|ABP93242.1| Leucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292559344|gb|ADE32345.1| Leucyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 839

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 36  EKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 95

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 96  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 155

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 156 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 213 LEEVDWPESIKDMQRNWI 230



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 105/313 (33%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +       + P D+++ G +    H +Y   + 
Sbjct: 493 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 552

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 553 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHMETGEELEQ 612

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 613 APAKMSKSLKNVVNPDDVVEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 664

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E++++   + A+AQ++
Sbjct: 665 -KFLDRVYRLLT--------TKELVAENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLM 715

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  L 
Sbjct: 716 IFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQGLA 755

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 756 NTGQSISYVAWPT 768


>gi|126640613|ref|YP_001083597.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|126386497|gb|ABO10995.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 490

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 7/196 (3%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+ + H+GH     I DV++RF+RL G  VL   G D  G     AA    V    
Sbjct: 1   MFPYPSGKLHMGHVRNYTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAAIAHKVAPAK 60

Query: 72  FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +  +N    RD    L +S  +D    T    ++   + L+ ++  KG IY+   +  + 
Sbjct: 61  WTFENIAYMRDQLKKLGLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIYRKLSTVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY-QDKLLSYYESHPEFIL 188
             D+    +++V  G            V+  +   Y+FR++ Y Q+ L         +  
Sbjct: 121 PVDQTVLANEQVENG----RGWRSGALVEKRDIPMYYFRITDYAQELLDDLDTLQDGWPQ 176

Query: 189 PIERRNEVISFVKSGL 204
            +           +G+
Sbjct: 177 QVLTMQRNWIGRSTGM 192


>gi|313884631|ref|ZP_07818389.1| leucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620141|gb|EFR31572.1| leucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 807

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  K Y      YP+ Q  H+GH       D+++R  R  G DVL   G D  G    + 
Sbjct: 30  DHPKYYALDMFPYPSGQGLHVGHPEGYTATDIISRMKRAQGYDVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N +NF+     L  SY  D  + TT+   +   + ++ ++  +G  
Sbjct: 90  ALDTGHDPADFTAENIQNFKRQIKSLGFSYDWDREVNTTDPEFYKWTQWIFSELYKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +         ++EV  G          +PV       +  +++AY D+LL  
Sbjct: 150 YEEEVAVNWCPALGTVLANEEVIDG----LSERGGHPVYRKPMRQWVLKITAYADRLLED 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E           +   I   +
Sbjct: 206 LEEVDWPESVKAMQRNWIGKSE 227



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 104/291 (35%), Gaps = 44/291 (15%)

Query: 224 PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
             + M  W         Y+            K   W P DL++ G +    H +Y   + 
Sbjct: 488 ETHTMPQWAGSSWYFLRYIDPDNKEALAAPDKLAKWLPVDLYIGGAEHAVLHLLYARFWH 547

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  +       +    EK+SKS GNV++P +V++E G D LR + + 
Sbjct: 548 KFLYDLGVVPTKEPFQRLYNQGMILGSNNEKMSKSKGNVVNPDDVVKEYGADTLRVYEMF 607

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    + ++GL+              + R   +++ D +            D+++ 
Sbjct: 608 MGPLDASIAWSENGLEGS---------RRFLDRVWRLLV-DEETGQLKASVQDSDDDALT 657

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            V  + ++++ E+++N   + A++Q++  ++E                   +  T++   
Sbjct: 658 KVYHQTVKKVTEDLENLHFNTAISQLMVFLNEA------------------KDQTIIP-- 697

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQRLKPGFMLH 500
            +       LL    P L  +I+ IL   +      + S ++ L     + 
Sbjct: 698 RQYAEGFVQLLAPIAPHLMEEIWSILGHQESISYVPWPSYEEELTIDNTVE 748


>gi|194360507|gb|ACF57901.1| methionyl-tRNA synthetase [Actinomyces odontolyticus]
          Length = 166

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 2/165 (1%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +     DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLSRYQADALRYFISAAGPETSDSDFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +   IPTPG   + D ++L         +   +++     AL
Sbjct: 61  VAGWGNLVNRTASMIAKKFG-EIPTPGELEDIDRALLDAVEAGFATVGNLIRHHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQL 458
           ++ + LV E ++Y    +P++LK     +R +TVL+   + +  L
Sbjct: 120 SEAMRLVGEANKYVTDTEPFKLKAPEQRERLATVLWTLAQAVADL 164


>gi|295398837|ref|ZP_06808831.1| leucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294972927|gb|EFG48760.1| leucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 841

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R+ R  G +VL   G D  G    + 
Sbjct: 66  SKPKYYALDMFPYPSGAGLHVGHPEGYTATDIMSRYKRAQGYNVLHPMGWDAFGLPAEQY 125

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   F+     L  SY  D  I TT+ + +   + ++ K+ +KG  
Sbjct: 126 ALDTGNDPVDFTAKNIATFKRQIKSLGFSYDWDREINTTDPKFYKWTQWIFTKLYEKGLA 185

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G           PV     + +  R++AY D+LL  
Sbjct: 186 YEDEILVNWCEALGTVLANEEVIDGKS----ERGGYPVVRKPMKQWVLRITAYADRLLEG 241

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E+       +E +   I   +
Sbjct: 242 LENVDWPNSVVEMQRHWIGKSE 263



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 98/256 (38%), Gaps = 45/256 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKA------KFWPADLHVIGKDILRFHAIYWPAFLLSA---- 282
            A +++              A       ++  DL++ G +    H +Y   + +      
Sbjct: 530 WAGSSWYFLRYIDPKNSNEFAPKEALDYWYNVDLYIGGAEHAVLHLLYARFWNMFLYDLG 589

Query: 283 ---NLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              N    +K+++ G IL +G EK+SKS GNV++P +V+ + G D LR + +        
Sbjct: 590 VVPNEEPFQKLYNQGMILGEGNEKMSKSKGNVVNPDDVVNQYGADTLRLYEMFMGPLDAS 649

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             + ++GL+              + R   +++ +   M             +  V  + +
Sbjct: 650 IAWSENGLEGSR---------RFLERVWRLLVDENGKMRDRITTMNTG--ELDKVYHQTV 698

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           Q++ E+  N   + A++Q++  V+E ++                       +  E ++  
Sbjct: 699 QKVTEDFDNLHFNTAISQMMVFVNEANK--------------------AESLYYEYVKGF 738

Query: 459 AILLQAFVPKLANKIF 474
             L+    P LA +++
Sbjct: 739 IQLIAPIAPHLAEEMW 754


>gi|326317967|ref|YP_004235639.1| valyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323374803|gb|ADX47072.1| valyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 961

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/421 (14%), Positives = 131/421 (31%), Gaps = 99/421 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLS----------AYQDKLLSYYESHPEFILPIERRNEVI 197
                    V+ M  + +F  +S          +   K +    S     +P    N   
Sbjct: 363 PICTRTGQVVEPMLTDQWFVAMSEVGKGDPTGKSIAQKAIDAVASGQVQFVPENWVNT-Y 421

Query: 198 SFVKSGLKDLSLSRKTFDWG--IKIPDDPQY--------------------------IMY 229
           +   + ++D  +SR+   WG  I    D                             ++ 
Sbjct: 422 NQWMNNIQDWCISRQ-LWWGHQIPAWYDEAGKVYVARSEADAQAQAGAGAKLTRDADVLD 480

Query: 230 VWIDALTNYLTTTGYL-----DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
            W  +     ++ G+       +       + P+ + V G DI+ F    +   +   + 
Sbjct: 481 TWYSSALVPFSSLGWPEALDDISATKDYDLYLPSSVLVTGYDIIFFWVARMIMMSTHFTG 540

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------------- 319
            +P             +G+K+SKS GNV+DP+++I+                        
Sbjct: 541 RVPFKHVYMHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALEPLLEKRTTGLRRPETAPQV 600

Query: 320 --------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+      + G+   +D    +     +  N + N  SR 
Sbjct: 601 RKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCNKLWN-ASRF 657

Query: 366 VSMILKDYDGMIPTPGA---------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           V M  + +D  +              F++ D  I+S   +V  E+ +  ++  +      
Sbjct: 658 VLMNCESHDCGLSDHTQADCEGGYLQFSQPDRWIVSALQKVEAEVAKGFEDYRLDHVAQA 717

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   V     D Y +  K  +++  +  +        +  +  +  L    +P +  +++
Sbjct: 718 IYEFVWNEFCDWYLEIAKV-QIQTGSEAQQRATRRTLIRTLETILRLAHPLIPFITEELW 776

Query: 475 D 475
            
Sbjct: 777 Q 777



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       + 
Sbjct: 55  ENFAIQLPPPNVTGTLHMGHAFNQTIMDSLARYHRMRGHNTLWVPGTDHAGIATQIVVER 114

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                            T KV+  +       +   R + D +D S + F  T + +   
Sbjct: 115 QLQEQGVSRHDLGREAFTRKVWEWKEKSGNTITTQMRRLGDSVDWSREYF--TMDDKLSK 172

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + ++ ++G IY+G     +    ++  +D EV              P+
Sbjct: 173 VVTDTFVRLYEQGLIYRGKRLVNWDPVLQSAVSDLEVESEEKDGSLWHIAYPL 225


>gi|330836491|ref|YP_004411132.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748394|gb|AEC01750.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 1044

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 125/399 (31%), Gaps = 27/399 (6%)

Query: 90  SYDDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           SY    RT     +      +    K         +        ++   +    E     
Sbjct: 392 SYPFCYRTHGPLIYRAMNCWFVNVTKIKETVLACNEQITWIPEHIKHGRFGKWLEGAHDW 451

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                    NP+   + +G            L    S  E      R+ + +        
Sbjct: 452 AISRNRFWGNPIPVWKCDG---------SDYLEVIGSKEELEKKSGRKLDDLHRHFIDDL 502

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                      G+        I+  W ++ +  +    Y           +PAD    G 
Sbjct: 503 TWPS-----PDGMGTMRRVPDILDCWFESGSMPVGELHYPFENKEYFETHFPADFINEGL 557

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F+ +   A  L         + +   +   G+K+SKS  N  DP+E++++ G D
Sbjct: 558 DQTRGWFYTLTIIAAALFEKPAFLNCIVNGIILAADGKKMSKSEHNYTDPMEIVKQYGAD 617

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR+ L+       D     +   K V   L   + N  S  ++    + DG  P+  A+
Sbjct: 618 ALRFSLMNSNVTHADDLKFSEDSVKEVIKMLLLPLWNAYSFFIT--YANIDGYKPSATAY 675

Query: 384 TE----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK 438
            +     D  I S   +++++  +  +   + +A + ++S +  + + Y    +    + 
Sbjct: 676 EDLENPLDRWIESSLQKLVKDSTDAYEAYDVQKAASALVSFIDGLNNWYIRRSRRRFWRS 735

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            N +           V+     +    +P +   I+  L
Sbjct: 736 ENDNDKKQAYDTLYHVLLTFIKVGAPLIPFITEDIYGNL 774



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +    PH GH     I D + RF  + G  V    G D HG  +    Q         
Sbjct: 47  PPFATGLPHFGHFVPGTIKDAIPRFKTMKGYRVERGFGWDCHGLPVEYEMQKTLDLAGYS 106

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++     +   + ++   RT +  + ++   ++K +
Sbjct: 107 DINAYGVGAFNEKCRSIVLRYTAEWQKAVTRMGRWVKFEGGYRTMDCDYMESVWWIFKTL 166

Query: 114 SDKGDIYK 121
            +KG IY+
Sbjct: 167 YEKGLIYE 174


>gi|320040185|gb|EFW22118.1| valyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1045

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 115/367 (31%), Gaps = 50/367 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDD 223
           +      +       Y    E          +    ++  +    +R  F      +  D
Sbjct: 503 WCLSRQLWWGHQAPAYFIQFEGEKGDNSDGNLWVTGRTEEEATEKARAKFPGKNFTLMRD 562

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+           +P  +   G DIL F    +      ++
Sbjct: 563 PD-VLDTWFSSGLWPFSTLGWPKKTH-DFENLYPTSVLETGWDILFFWVARMIMLGIKMT 620

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI----------------------- 317
             +P  ++V+ H  I   +G K+SKSLGNV+DP++V+                       
Sbjct: 621 GQVPF-REVYCHSLIRDSEGRKMSKSLGNVVDPLDVMRGISLDALHEKLLEGNLAQKEVA 679

Query: 318 --------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                          E G DALR+ LV     G D  +D   +         N I     
Sbjct: 680 TATKYQKKAFPKGIPECGADALRFSLVSYTTGGGDINFDIQVI--HGYRRFCNKIYQATR 737

Query: 364 RSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +  D+         GA + ++  IL   S   +   E +  +    A + +    
Sbjct: 738 YVLGKLGSDFQPLASASKTGAESLAERWILHKFSTAARIANEKLDQREFSDAASVLYQYW 797

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D + +  K    +    D   +        +     L+   +P ++ +++  L  
Sbjct: 798 YSQLCDVFIENSKSLLQQDAPTDIQQSAKQTLYTALEGALTLIHPIMPFISEELWQRLPR 857

Query: 480 ADENRCF 486
             +++  
Sbjct: 858 RPDDKTI 864



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K +    ++          H+GHA    + D + R+ R+ G  VL+  G D  G     
Sbjct: 117 VKPQGSFVMTFPPPNVTGALHMGHALTNSLQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 176

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         +  +  ++       +  S+D      T +K 
Sbjct: 177 VVEKILWKNERKTRHDVGRPVLTNMIWDWTHKYHKSITTSMKNMGGSFDWTKEAFTMDKN 236

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + K+ ++G IY+      + 
Sbjct: 237 LTAAVMETFVKLHEEGTIYRANRLVNWC 264


>gi|303321452|ref|XP_003070720.1| valyl-tRNA synthetase, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240110417|gb|EER28575.1| valyl-tRNA synthetase, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 1045

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 115/367 (31%), Gaps = 50/367 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDD 223
           +      +       Y    E          +    ++  +    +R  F      +  D
Sbjct: 503 WCLSRQLWWGHQAPAYFIQFEGEKGDNSDGNLWVTGRTEEEATEKARAKFPGKNFTLMRD 562

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+           +P  +   G DIL F    +      ++
Sbjct: 563 PD-VLDTWFSSGLWPFSTLGWPKKTH-DFENLYPTSVLETGWDILFFWVARMIMLGIKMT 620

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI----------------------- 317
             +P  ++V+ H  I   +G K+SKSLGNV+DP++V+                       
Sbjct: 621 GQVPF-REVYCHSLIRDSEGRKMSKSLGNVVDPLDVMRGISLDALHEKLLEGNLAQKEVA 679

Query: 318 --------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                          E G DALR+ LV     G D  +D   +         N I     
Sbjct: 680 TATKYQKKAFPKGIPECGADALRFSLVSYTTGGGDINFDIQVI--HGYRRFCNKIYQATR 737

Query: 364 RSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +  D+         GA + ++  IL   S   +   E +  +    A + +    
Sbjct: 738 YVLGKLGSDFQPLASASKTGAESLAERWILHKFSTAARIANEKLDQREFSDAASVLYQYW 797

Query: 422 S--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
                D + +  K    +    D   +        +     L+   +P ++ +++  L  
Sbjct: 798 YSQLCDVFIENSKSLLQQDAPTDIQQSAKQTLYTALEGALTLIHPIMPFISEELWQRLPR 857

Query: 480 ADENRCF 486
             +++  
Sbjct: 858 RPDDKTI 864



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K +    ++          H+GHA    + D + R+ R+ G  VL+  G D  G     
Sbjct: 117 VKPQGSFVMTFPPPNVTGALHMGHALTNSLQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 176

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         +  +  ++       +  S+D      T +K 
Sbjct: 177 VVEKILWKNERKTRHDVGRPVLTNMIWDWTHKYHKSITTSMKNMGGSFDWTKEAFTMDKN 236

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + K+ ++G IY+      + 
Sbjct: 237 LTAAVMETFVKLHEEGTIYRANRLVNWC 264


>gi|322375009|ref|ZP_08049523.1| leucine--tRNA ligase [Streptococcus sp. C300]
 gi|321280509|gb|EFX57548.1| leucine--tRNA ligase [Streptococcus sp. C300]
          Length = 833

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|301784635|ref|XP_002927731.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 1262

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 69/497 (13%), Positives = 146/497 (29%), Gaps = 37/497 (7%)

Query: 28  MIIADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAAQNAGVT--TKVFVDQNSRNFRDM 83
            ++AD   R     G      +    D          Q               +    D 
Sbjct: 306 TVLADSYVREEEGTGVVHQAPYFGADDYRVCMDLSIIQKDSPPVCPVDASGCFTAEVTDF 365

Query: 84  ADVLDISYD-DFIRTTEKRHHDTCRILWKKISDKGDIYK----GCYSGWYSLRDEAYYND 138
                   D + IRT +++        +                     + +R E     
Sbjct: 366 TGQYVKDADKNIIRTLKEKGRLLVSSTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMV-- 423

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           +++ +  D  Y+  +   V+      +      +      Y+ +     +  +    V  
Sbjct: 424 EQLLRNNDLCYWVPEF--VREKRFGNWLKDARDWAVSRNRYWGTPIPLWVSDDFEEVVCI 481

Query: 199 FVKSGLKDLSLSRKTF-------------DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
              + L++LS ++ +                G  +      +   W ++ +       Y 
Sbjct: 482 GSMAELEELSGAKVSDLHRESIDHLTIPSRCGKGVLHRISEVFDCWFESGSMPYAQVHYP 541

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
                     +PAD    G D     F+ +   A  L    P    + +   +   G+K+
Sbjct: 542 FENKREFEDTFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFRNVIVNGLVLASDGQKM 601

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SK   N  DP+ +I + G DALR +L+       +    K+   + V  D+     N   
Sbjct: 602 SKRKKNYPDPLSIIHKYGADALRLYLINSPVVKAENLRFKEEGVRDVLKDVLLPWYNAYR 661

Query: 364 RSVSMIL--------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             +  +L        +         G+   +D  +LS    ++      M    ++  + 
Sbjct: 662 FFIQNVLRLQKEEGMEFLYNENTVKGSANVTDRWVLSCIQSLVGFFETEMAAYRLYTVVP 721

Query: 416 QVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +++  V    + Y    +     +   +   T L     V+  L  L+  + P L   ++
Sbjct: 722 RLVKFVDVLTNWYVRMNRRRLKGENGVEDCVTALETLFSVLLSLCRLMAPYTPFLTELMY 781

Query: 475 DILFVADENRCFQSLDQ 491
             L +  +    Q  D 
Sbjct: 782 QNLKLLIDPVSVQDKDT 798



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K++ K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KQKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++   + L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGIVEYNNQCRAIVMRYSTEWKSTVNRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|257452605|ref|ZP_05617904.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 931

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           +         Q       PV + EE G        ++       +H    +  E  +  +
Sbjct: 452 ETRPDWCISRQRVWGVPIPVFYNEETG--------EEIFNQDILNHVISFVEKEGSDAWL 503

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                 L      +K    GI +  +   IM VW D+ +++             +   WP
Sbjct: 504 LHTSEELIGEENLKKYHLEGISLRKETN-IMDVWFDSGSSHRAVLE------TWEGLRWP 556

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F      +       P  K +        KGEK+SKS GNV+ P +
Sbjct: 557 ADLYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVNDGKGEKMSKSKGNVVAPEK 616

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I++ G D LR +    +   +D     + +K+             V  +   IL +  G
Sbjct: 617 IIKQYGADILRLWCA-SVDYREDVKISDNIVKQMAET------YRRVRNTARYILGNSYG 669

Query: 376 MIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
             P   A       E D+  L     + + + E+ +    +    ++     +     Y 
Sbjct: 670 FDPKKDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYL 729

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K     +K +     +   V +E++  L  ++   +   A +I++ L
Sbjct: 730 DIIKDRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHL 779



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E   +     Y N   HIGHA   I+ D++ ++  L G    +  G D HG  I   
Sbjct: 46  KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTC 106
                 +        +  +  ++     +DI  ++FIR            T + +     
Sbjct: 106 VMEKLGSKAKDMTALEIRQLCKEYALKWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQ 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++ ++   G I+KG    ++S   E    + E+   
Sbjct: 166 LQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH 203


>gi|256384445|gb|ACU79015.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385278|gb|ACU79847.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455269|gb|ADH21504.1| leucine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 804

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 3/183 (1%)

Query: 6   KLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K YI     YP+    H+GH       DV +RF R+ G DVL   G D  G    + A  
Sbjct: 31  KAYILDMFPYPSGSGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQYALK 90

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G   + F  QN  NF+   + +  SYD    I T +  ++ T + ++K++  KG     
Sbjct: 91  TGNDPREFTLQNIENFKVQLNKMGFSYDYDKEINTADPNYYKTTQWIFKQLYKKGLAENR 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +         +DE+ +            PV   +   +  +++ Y DKLL   ++
Sbjct: 151 DIDVNWCQELGTVLANDEIIEKNGLMVSERGEYPVVKKKMRQWVLKITDYADKLLDGLDN 210

Query: 183 HPE 185
              
Sbjct: 211 LDW 213



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 43/234 (18%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL--------SANLPLPKKVFSHGFILHKGEKIS 304
            K+ P DL++ G++    H +Y   +            N P  +       +     K+S
Sbjct: 523 EKWLPVDLYIGGQEHAVGHLLYARFWTHFLYDLGLLPTNEPFKRLFNQGMILGPDNRKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +VI+  G DALR + +          +  DGL               ++R
Sbjct: 583 KSWGNVINPDDVIDTHGADALRLYEMFMGPLDASLPWSFDGLDAS---------LKWLNR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              MI K              ++  +  V + V++++ + +Q    + A++Q++ LV+ +
Sbjct: 634 CYRMINK--------IEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNTAISQLMVLVNAI 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +               +  +TV    +E       +L  F P L+ ++++ L 
Sbjct: 686 YK---------------EELNTVYKPYIEGF---VKMLSLFAPHLSEELWEKLG 721


>gi|325568223|ref|ZP_08144631.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158256|gb|EGC70408.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 804

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYD----VIRKPMRQWMLKITAYADRLLDD 204

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 205 LEEVDWPESIKEMQRNWI 222



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 133/413 (32%), Gaps = 64/413 (15%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +        +   G++ +  Y+      +  + +  +     +      + 
Sbjct: 341 HDERDHEFAKTFGLEIIPVLAGGNVEESAYTEDGLHINSDFLDGLDKETAIEKMVAWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +   K+     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTTTALSEDQLPLRLPKTDNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP----DGSKAK 254
            ++    +    +                M  W    + Y        N     D  K K
Sbjct: 461 GESPLANVTDWVNVTDPETGKKGRRETNTMPQWA-GSSWYFLRFIDPHNKSVLADYDKLK 519

Query: 255 FW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISK 305
            W P D+++ G +    H +Y   +         +    P  K       +    EK+SK
Sbjct: 520 RWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +VI + G D LR + +          ++++GL+              + R 
Sbjct: 580 SRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLEGS---------RKFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +I+ +   M      F   D  +  V ++ ++++ E+ +    + A++Q++  V+E  
Sbjct: 631 WRLIVDENGKMRDRITTFN--DGKLSKVYNQTVKKVTEDYEQLHFNTAISQLMVFVNEAY 688

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +                       +  E +     LL    P +  +++ IL 
Sbjct: 689 K--------------------ADALPYEYVEGFVQLLAPIAPHIGEELWSILG 721


>gi|322377200|ref|ZP_08051692.1| leucine--tRNA ligase [Streptococcus sp. M334]
 gi|321281913|gb|EFX58921.1| leucine--tRNA ligase [Streptococcus sp. M334]
          Length = 833

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKAVTEQIESLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|315657976|ref|ZP_07910850.1| leucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315497012|gb|EFU85333.1| leucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 804

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPRAFTKQNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV+ G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVFDG----VSERGGHPVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESIKDMQRNWIGRSE 226



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 107/278 (38%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNEQMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNV++P +++   G D LR + +   
Sbjct: 549 YDLGVVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVNSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + + + D +          ++S+  V
Sbjct: 608 PLDAAIAWSENGL---------DGSRRFLDRVWRLFINEDDSLSQKFVESN--NKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+      + A++Q++  ++E  +  +  +P+                   
Sbjct: 657 YNQTVKKVTEDFDTLNFNTAISQLMVFINECYKVDEIYQPYA------------------ 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                  +L    P +  +++  L   DE   +Q    
Sbjct: 699 --EGFVKMLAPIAPHIGEELWQKLG-HDETITYQPWPT 733


>gi|309389003|gb|ADO76883.1| Isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 931

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 99/277 (35%), Gaps = 15/277 (5%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L                 + IM VW D+ +++                 WPA +++ G D
Sbjct: 511 LPEGYTCPHCNSDSFTKEEDIMDVWFDSGSSHKAVLE------ARDNLSWPAQVYLEGTD 564

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++    A       P  + + +   +  KG K+SKS GNV+ P +VI++ G D 
Sbjct: 565 QYRGWFNSSLLTAVATEGVAPYREVITNGFTVDKKGNKMSKSKGNVVSPHKVIDQYGADI 624

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAF 383
           LR ++        D     + LK+   ++    I N     +  I   D D         
Sbjct: 625 LRLWVASSD-FKNDIRVSDNILKQS--SEAYRRIRNTYRFILGNISDFDSDQNYVEYEDR 681

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTN 440
            E D  I+     ++++I    ++   HR    V +   V     Y D  K       T+
Sbjct: 682 RELDRWIMIRLQDLIKKITSAYESYEYHRVYHDVHNFCTVEMSSLYMDITKDRLYTDGTD 741

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +      +++  L + L   VP  + +++  L
Sbjct: 742 SLSRRSAQSTLYDILMALMVTLAPIVPHTSEEVWQFL 778



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 16/161 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +   +     Y N   HIGHA   I+ D + RF  L+G    +  G D HG  I   
Sbjct: 45  EGNKPFILHDGPPYANGDIHIGHALNKILKDFVTRFATLNGYYSPYIPGWDTHGLPIEYQ 104

Query: 62  AQNAGVTTKV--------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
             +     +               +  +     ++    L +   +D+   T  K +   
Sbjct: 105 VTSEMSDQERADISIAELREKCTNYALKYVDRQKEQFKRLGVWGEWDNPYLTLNKEYEVK 164

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++ +++ K   Y+G     +    E    + EV  G D
Sbjct: 165 QIEVFGEMAKKDLFYRGKKPVHWCPHCETALAEAEVEHGED 205


>gi|296269395|ref|YP_003652027.1| isoleucyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092182|gb|ADG88134.1| isoleucyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 1050

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 125/401 (31%), Gaps = 38/401 (9%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-----DGQYYNAQHNPVQWMEE 162
             W+  +         +    +   +    ++E           G+Y     N V W   
Sbjct: 397 HCWRCHTPLLYYALPSWYIRTTAIKDRLLAENERTNWFPATIKHGRYGEWLRNNVDW--- 453

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                  S Y    L  +    E +  +    E+  +    L  L   R   D  +    
Sbjct: 454 ---ALSRSRYWGTPLPLWICPEEHVTCVGSLKELGEYAGRDLTGLDPHRPYVDEVVFPCP 510

Query: 223 DPQ-------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      ++ VW D+        G          K +P        D     F+++
Sbjct: 511 TCGAEAKRVPDVIDVWYDSGAMPFAQWGAPHINKDVFEKSFPGQFICEAIDQTRGWFYSM 570

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              + L+         +     +   G K+SK  GNV++PI ++E+ G DALR+F+    
Sbjct: 571 MAVSTLVFDRSSYENVLCLGLILAEDGRKMSKHFGNVLEPIPLMEQHGADALRWFMATSG 630

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES------- 386
           +           L++ V   L          + S  +   +    +P    E+       
Sbjct: 631 SPWSPRRIGHGALEEIVRRVLL-----TYWNTASFFVLYANAESWSPAKLAEAPAYDRRP 685

Query: 387 --DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
             D  IL+   R + E+  +M++    RA  ++   + ++  ++  +             
Sbjct: 686 LIDRWILAELHRTVSEVTASMEDFDTARAGRRLTEFLDDLSNWYVRRSRRRFWSGEE--- 742

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                   E +  +  L+   VP + + I+ +L   D+   
Sbjct: 743 -AAFATLYECLETVTRLMAPLVPFITDYIWGVLRTPDDPTS 782



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 46/157 (29%), Gaps = 19/157 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +             N  P + H    +  DV  R+  + G  V    G D HG  +  A 
Sbjct: 41  DGPPWIFYEGPPTANGMPGVHHVEARVFKDVFPRYKSMRGYYVPRKAGWDCHGLPVEVAV 100

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       +  V +    F  M + +   +      RT +  + 
Sbjct: 101 EKELGLSGKPEIESYGIAEFNKRCRESVLRYVDAFEQMTERMGYWVDMSQAYRTMDPSYI 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +      K I +KG +++      Y  R     +D E
Sbjct: 161 EAVWWSLKVIWEKGLLFRDFRITPYCPRCGTPLSDHE 197


>gi|113868709|ref|YP_727198.1| valyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|113527485|emb|CAJ93830.1| Valyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 955

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 69/456 (15%), Positives = 142/456 (31%), Gaps = 94/456 (20%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
              D  R + + +  +G + +       + R E   +  E           ++  P    
Sbjct: 324 DRFDARRAIVEDLDKRGLLAEVKKHKLMTPRSERTGSAIEPMLTDQWFVAMSKPAP---- 379

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--I 218
             EG F+   +  +  L   +S    ++P    +   +     ++D  +SR+   WG  I
Sbjct: 380 --EGTFYPGRSIAEVALEAVQSGEIKLVPENWIST-YNQWLGNIQDWCISRQ-LWWGHQI 435

Query: 219 KIPDD-----------------------------PQYIMYVWIDALTNYLTTTGYLDNPD 249
               D                              + ++  W  +     ++ G+     
Sbjct: 436 PAWYDDAGNCFVGRTEEEALAKAKAAGSTGSLRREEDVLDTWFSSALVPFSSLGWPGETP 495

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                F P+ + V G DI+ F    +          +P             +G+K+SKS 
Sbjct: 496 -EMHHFLPSSVLVTGYDIIFFWVARMVMMTKHFIGKVPFHTVYVHGLVRDSEGKKMSKSE 554

Query: 308 GNVIDPIEVIEE-------------------------------------VGVDALRYFLV 330
           GN +DP+++I+                                       G DALR+   
Sbjct: 555 GNTLDPVDLIDGIDLDTLLQKRTTGLRRPKDAPKIEKKTKKEFPEGIPAFGADALRFTFA 614

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--------- 381
                G++  +D    +     +  N + N  +R V M  + +D  +             
Sbjct: 615 SLATLGRNVNFDTGRCEG--YRNFCNKLWN-ATRFVLMNTEGHDCGMGPCNNDCGPDGYL 671

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT 439
            F+++D  I+S+  RV  E+ +             +   V +   D Y +  K      T
Sbjct: 672 DFSQADRWIVSLLQRVEAEVEKGFAEYRFDNIANAIYKFVWDEYCDWYLELAKVQIQNGT 731

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              + +T     + V+  +  L    +P +  +++ 
Sbjct: 732 EAQQRAT-RRTLLRVLETVLRLAHPIIPFITEELWQ 766



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 61/181 (33%), Gaps = 22/181 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR  R+ G + L+  GTD  G       +
Sbjct: 39  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMSGANTLWVPGTDHAGIATQIVVE 98

Query: 64  --------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                             T KV+  +       +R  R M   +D S + F  T      
Sbjct: 99  RQLESQGVSRHDLGREKFTEKVWAWKEESGSTITRQVRRMGASIDWSREYF--TMSPEMS 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                 + ++ ++G IY+G     +        +D EV    +       H P+   + +
Sbjct: 157 KAVTEAFVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVDSIEEEGSLWHIHYPLVEADAK 216

Query: 164 G 164
           G
Sbjct: 217 G 217


>gi|224024452|ref|ZP_03642818.1| hypothetical protein BACCOPRO_01177 [Bacteroides coprophilus DSM
           18228]
 gi|224017674|gb|EEF75686.1| hypothetical protein BACCOPRO_01177 [Bacteroides coprophilus DSM
           18228]
          Length = 1162

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 102/270 (37%), Gaps = 14/270 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y            ++PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQLHYPFENKEIVDNRSYYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGTIEKFGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D DG+ + V       + N  S        D   Y           E D  IL
Sbjct: 743 PWDNLKFDVDGVDE-VRRKFFGTLYNTYSFFALYANVDGFTYAEADVPMEERPEIDRWIL 801

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           S+ + ++QE+     +    +A   +   V++   + Y   + ++ W    +  D+ S  
Sbjct: 802 SLLNSLIQEVDACYNDYEPTKAGRAITDFVNDNLSNWYVRLNRKRFWGSAMS-TDKLSA- 859

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +  +A L+    P  A+ ++  L
Sbjct: 860 YQTLYTCLETVAKLMAPIAPFYADHLYMDL 889



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   RF  + G  V    G D HG  
Sbjct: 34  MTEREGHPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRFKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTT 98
           +    + A   TK  +                  + ++ + D+   +   +  D+   T 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNKHCRTDVMKFTKEWTDLTHKMGYWVDLDNPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYGKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDLTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAQWGTPYFLAWTTTPW 239


>gi|145344290|ref|XP_001416669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576895|gb|ABO94962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1056

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 120/398 (30%), Gaps = 62/398 (15%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF---VK 201
            +  ++    N   W      ++        +    E   +  +P     ++  +     
Sbjct: 490 MEPTWFRWLENIRDWCISRQLWWGHRIPAFYVRFAGEGDDDCGMPGGSSEKMDRWVIGRD 549

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           +    +S  +K       +  D   ++  W  +     +  G+ D      A+F+P  L 
Sbjct: 550 ADEARVSAEKKFPGREFTLEQDED-VLDTWFSSGLFPFSVFGWPDETP-DLAEFYPTSLL 607

Query: 262 VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-- 317
             G DIL F    +      L+  +P  +           G K+SKSLGNVIDP+ VI  
Sbjct: 608 ETGHDILFFWVARMVMMGMKLTGKVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPLHVIEG 667

Query: 318 -----------------------------------EEVGVDALRYFLVREIACGKDGFYD 342
                                               E G DA+R+ LV   A G+D   D
Sbjct: 668 IDLAALNETLVGGNLDEKERKKAQAGQKADFPDGIPECGTDAMRFALVSYTAQGRDINLD 727

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---------ESDESILSV 393
              +             N +  +    + +       P  F           + + +LS 
Sbjct: 728 VLRVVS------YRHWCNKLWNATKFAMMNLGDEYVPPADFNATFDVQSLPLAAKWVLSR 781

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +         M+    + A   V +       D Y +  KP  +  ++      +    
Sbjct: 782 LNATCASTNAGMEVYDFNTATNSVYAFWQYELCDVYIEIIKP-VMSGSDEMAKKQLRDAL 840

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
              +     LL  F+P +  +++  L         +S+
Sbjct: 841 WICLDAGLRLLHPFMPFVTEELWQRLPRTRNENTPKSI 878



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/453 (10%), Positives = 116/453 (25%), Gaps = 47/453 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I           HIGHA    I D + R+ R+ G + L+  GTD  G      
Sbjct: 117 TNKPKFVIVIPPPNVTGALHIGHALTNAIQDTIVRWRRMQGYEALWVPGTDHAGIATQTV 176

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +      +                  + D       +    +  S D      T +++ 
Sbjct: 177 VEKKLQREEGVTRHDLGREKFLERVFEWKDVYGGKICNQLRRIGSSMDWTREAFTMDEKL 236

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK----GADGQYYNAQHNPVQ 158
               +  + ++ D+G IY+      +S + +   +D EV      G            V+
Sbjct: 237 SKAVKEAFVRMFDEGLIYRDNRLVNWSCQLKTAISDIEVDYIELDGPTMLAVPGHTKKVE 296

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +     + +     Q +++         +                L    +        I
Sbjct: 297 FGVITSFAYPFEDGQGEVVVATTRIETMLGDTAVAVHPEDERYKSLHGKFVLHPFNGRRI 356

Query: 219 KIPDDPQYIMYVWIDAL--TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP 276
            I  D + +   +                +       +F        G    +    +  
Sbjct: 357 PIICDAELVDMEFGTGCVKITPAHDPNDFNTGKRHDLEFINV-FTEEGLVNEQGGEQFQG 415

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSL-----------------GNVIDPIEVIEE 319
                  + + + +      L++G+  +                       ++  ++ +E
Sbjct: 416 MKRFECRVAITEAL--DKLGLYRGKANNPMRLGLCSRSKDVIEPMLKPQWWVNCQDMAKE 473

Query: 320 VGVDALRYFLVREIACGKDGFYDK-DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
               A    L       +  ++   + ++    +        + +  V    +  D    
Sbjct: 474 ACDAARDKRLEILPTFMEPTWFRWLENIRDWCISRQLWWGHRIPAFYVRFAGEGDDDCGM 533

Query: 379 TPGAFTESDESILSV-CSRVLQEIRENMQNQLI 410
             G+  + D  ++            +    +  
Sbjct: 534 PGGSSEKMDRWVIGRDADEARVSAEKKFPGREF 566


>gi|220930813|ref|YP_002507722.1| leucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|220001141|gb|ACL77742.1| leucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 814

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 74/203 (36%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +KLY     +YP+    H+GH Y   + D  AR  R+ G +V    G D  G     
Sbjct: 27  ETDKKLYCLEMFSYPSGANLHVGHWYNYGLTDSWARMKRMQGYNVFHPMGFDAFGLPAEN 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N          +     +D  I+T    ++   + L+ ++   G 
Sbjct: 87  YAIKTGIHPQDSTLKNIETMEGQLKEMGATFDWDYEIKTCMPDYYKWTQWLFLQLYKSGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +  +      +++V  G            V   +   +FF+++AY  +LL 
Sbjct: 147 AYRKNAPVNWCPKCNTVLANEQVVDG----CCERCDTEVTKRDLTQWFFKITAYAQELLD 202

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             ++        + +   I   +
Sbjct: 203 KLDTIDWPEKTKKIQTNWIGRSE 225



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 96/296 (32%), Gaps = 41/296 (13%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G     DP  +        + Y        N D      W     P D +V G + 
Sbjct: 475 CPKCGATAKRDPDTLDT--FVCSSWYHLRYPDNRNNDKPFDTEWINKLLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P    V     +   G K+SKS GN I P + + +
Sbjct: 533 AAMHLLYARFITKALRDLGFLNFDEPFLSLVHQGTILAPDGSKMSKSRGNTISPDDYVRK 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L         G +  DG+K          I    SR   ++    +     
Sbjct: 593 YGSDIFRMYLGFGFNYVDGGPWSDDGIKA---------ISRFASRIERLVESLAEQKSKA 643

Query: 380 P-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                 + D+ +  V    ++   ++      + A+++ + LV+ + +Y           
Sbjct: 644 SRTDIDKDDKELNFVRHTAIKGATQDTDRFQFNTAISRCMELVNALFKY----------- 692

Query: 439 TNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQ 491
                  T      E  I+ L  L+  F P  A ++++ L    +  N+ +   D+
Sbjct: 693 --DAEVKTKNIQLFEDTIKDLVKLVSPFAPHFAEEMWEQLGCEYSLFNQKWPEFDE 746


>gi|315652483|ref|ZP_07905468.1| leucine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485272|gb|EFU75669.1| leucine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 804

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQVLKGHYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+ + +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAKSTAENVANIKRQINEIAAIYDWDREVNTTDPKFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVDGK----CERCGTAVTKKNLRQWMLKITAYADRLLND 203

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +++ I
Sbjct: 204 LDKLDWPEKVKKMQSDWI 221



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 111/332 (33%), Gaps = 53/332 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +   +               E +     + E      +G   L+   +  +    +   P
Sbjct: 426 WGEPIPIIHCPCCGNVPVPEEELPLELPKVESYQPTGTGESPLAAIDEWVNTTCPVCGGP 485

Query: 225 QY----IMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIY 274
                  M  W    +++        + D          K+ P D+++ G +    H +Y
Sbjct: 486 AKRETNTMPQWA--GSSWYFLRYVDPHNDKELVSKKMADKYLPVDMYIGGVEHAVLHLLY 543

Query: 275 WPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              +         +  + P  K           G+K+SKS GNV+ P +++ + G DALR
Sbjct: 544 SRFYTKFLHDIGVVDFDEPFTKLFNQGMINGSDGQKMSKSKGNVVSPDDLVRDYGCDALR 603

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            + +       D  +D  G++                     + K Y  ++       E+
Sbjct: 604 MYELFVGPPELDADWDDRGIEG----------------VARFLNKFYKLVMDNKDKNVEA 647

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D  +L V + ++ +I +      ++  +A  +      ++  +  K     KT  D+   
Sbjct: 648 DRELLRVRANLISDIEQRFNAFSLNTVIAGFMEYN---NKLIELGK-----KTGVDK--- 696

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 E ++   ILL  F P +  ++++ L 
Sbjct: 697 ------ETLKVFTILLAPFAPHIGEELWEELG 722


>gi|229175455|ref|ZP_04302966.1| Leucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607987|gb|EEK65298.1| Leucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 802

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIVKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|224539866|ref|ZP_03680405.1| hypothetical protein BACCELL_04776 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518515|gb|EEF87620.1| hypothetical protein BACCELL_04776 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1141

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 98/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y             +PAD    G D     F  ++
Sbjct: 602 KPMKREADLIDVWFDSGAMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLH 661

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++   +     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 662 AIASMVFDTISYKAVISNGLVLDKNGNKMSKRLGNGVDPFSTIEKYGSDPLRWYMITNSS 721

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D DG+++                S+   +  ++            E D  ILS
Sbjct: 722 PWDNLKFDVDGIEEVRRKFFGTLYNTYSFFSLYANVDGFEYKEADVPMAERPEIDRWILS 781

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 782 VLNTLVKEVDTCYSEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 839

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A+K++  L  A
Sbjct: 840 QTLYTCLETVAKLMSPIAPFYADKLYMDLVTA 871



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFLVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D++ D +I 
Sbjct: 94  VELGVEKAMGITKEDIGKTISVADYNAACRKDVMKFTKEWEDLTHKMGYWVDMT-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLYTKGYLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDVTC 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VAQFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|209519277|ref|ZP_03268078.1| valyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209500289|gb|EEA00344.1| valyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 959

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 128/397 (32%), Gaps = 90/397 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    +     +P         +++  ++D  +SR+   WG +IP
Sbjct: 378 PEGTFNPGKSIAETALDVVRNGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 435

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +  + 
Sbjct: 436 AWYGENGEVFVAKTEEDARAKVVAAGYTGSLKRDEDVLDTWFSSALVPFSSLGWPNETEE 495

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K    P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 496 LKHFM-PSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFETVYVHGLVRDAEGQKMSKSKG 554

Query: 309 NVIDPIEV-------------------------------------IEEVGVDALRYFLVR 331
           N +DPI++                                     I   G DALR+ +  
Sbjct: 555 NTLDPIDIVDGIGLDALVAKRTTGLMNPKQAASIEKKTRKEFPDGIPAFGTDALRFTMAS 614

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--------- 382
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 615 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGFGQPAQCGECGPEGH 671

Query: 383 --FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
             F+++D  I+S   RV  E+ +   +         +   V +   D Y +  K  +++ 
Sbjct: 672 LHFSQADRWIVSQLQRVEAEVAKGFSDYRFDNVANAIYKFVWDEYCDWYLELAKV-QIQT 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             P++        + V+  +  L    +P +   ++ 
Sbjct: 731 GQPNQQRATRRTLLRVLETVLRLAHPVIPYITEALWQ 767



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 42  NRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIVV 101

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  Q+     +    L   I +     T + +   
Sbjct: 102 ERQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITNQVRRLGASIDWSREYFTMDDKMSA 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ ++ ++G IY+G     +        +D EV    +  +    H P+
Sbjct: 162 AVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIHYPL 214


>gi|189465798|ref|ZP_03014583.1| hypothetical protein BACINT_02160 [Bacteroides intestinalis DSM
           17393]
 gi|189434062|gb|EDV03047.1| hypothetical protein BACINT_02160 [Bacteroides intestinalis DSM
           17393]
          Length = 1141

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 98/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y             +PAD    G D     F  ++
Sbjct: 602 KPMKREADLIDVWFDSGAMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLH 661

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++   +     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 662 AIASMVFDTISYKAVISNGLVLDKNGNKMSKRLGNGVDPFSTIEKYGSDPLRWYMITNSS 721

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D DG+++                S+   +  ++            E D  ILS
Sbjct: 722 PWDNLKFDVDGIEEVRRKFFGTLYNTYSFFSLYANVDGFEYKEADVPMAERPEIDRWILS 781

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 782 VLNTLVKEVDTCYSEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 839

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A+K++  L  A
Sbjct: 840 QTLYTCLETVAKLMSPIAPFYADKLYMDLVTA 871



 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFLVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D++ D +I 
Sbjct: 94  VELGVEKAMGITKEDIGKTISVADYNAACRKDVMKFTKEWEDLTHKMGYWVDMT-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLYTKGYLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDVTC 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VAQFKMKNPKPEMAEWGTPYFIAWTTTPW 239


>gi|291295460|ref|YP_003506858.1| leucyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470419|gb|ADD27838.1| leucyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 875

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 6/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K YI     YP+   H+GH     + D LARF    G  VL   G D  G     A
Sbjct: 32  KAGKKAYILVMFPYPSGDLHMGHLKNYTMGDALARFRVQQGYSVLHPFGWDAFGLPAENA 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV+   +   N +  ++   ++ I YD    + T    ++   + ++ K+ +KG +
Sbjct: 92  ALKFGVSPADWTFGNIKQSKESLALMGIRYDWSREVTTCLPEYYKWNQWIFLKMYEKGLV 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   +++   +++V  G            V+  E E ++ +++ Y ++LL+ 
Sbjct: 152 YRKKSLVNWDPVEQSVLANEQVIDG----RGWRSGALVEKRELEQWYLKITDYAERLLND 207

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +  P +   ++           G
Sbjct: 208 LDKLPRWPEKVKAMQRAWIGKSQG 231



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/380 (13%), Positives = 127/380 (33%), Gaps = 57/380 (15%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP-IERRNEVI 197
           +       G           + +   YF R +  Q+    +      F +P  +    + 
Sbjct: 479 ECTCPKCGGPARRDTDTMDTFFDSSWYFLRYTDAQNPQAPFDPEKANFWMPVDQYIGGIE 538

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
             +   L     ++   D G+   ++P        + L       G+ +  +    +   
Sbjct: 539 HAILHLLYSRFFTKFLHDLGLVEAEEP-------FEGLFTQGMVMGWTNVGEVEVREGR- 590

Query: 258 ADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK--------ISKSLGN 309
                    I            L   L L +   S   +  +G K        +SKSLGN
Sbjct: 591 ---------IYFLDDARRSKLELEQGLTLEEAQKSGAELREEGGKTYFWKPAVMSKSLGN 641

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            +     ++E G D  R  ++       +  + ++G++         G    ++R   ++
Sbjct: 642 GVMVGPFVKEQGADIARVTILFAAPPENEMIWTEEGVQ---------GAWRYLNRVYRLV 692

Query: 370 LKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
            +    +   P     +      +++     + ++++ E+++    + A+A ++ L++ +
Sbjct: 693 AEQRVELKAQPDLLEPATLEGPHKALYQKLHQTIKKVTEDLEALRFNTAIAALMELLNAL 752

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
             Y               +   V  V  E + +   +L  F P LA +++   +   ++ 
Sbjct: 753 GDY--------------RKEHGVTPVYREAVLRYIQMLAPFAPHLAEELWHEFY---DDS 795

Query: 485 CFQSLDQRLKPGFMLHKTFD 504
            F++   RL    ++  +F+
Sbjct: 796 VFKAPWPRLDESALVADSFE 815


>gi|51892369|ref|YP_075060.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826163|sp|Q67Q27|SYI_SYMTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51856058|dbj|BAD40216.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 938

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 72/373 (19%), Positives = 122/373 (32%), Gaps = 31/373 (8%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
              G+  +  EA  +   +      + Y        W       + L      +L+    
Sbjct: 418 KVEGFMDIAKEAMNHVRWIPDWGYNRMYAMIDGLADWCISRQRAWGLP---IPILTCSAC 474

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSR----------KTFDWGIKIPDDPQYIMYVWI 232
                 P         F   G                       G +     + I+ VW 
Sbjct: 475 DEPSFEPKMFEKIAEIFRAEGSDAWWRRPAEDFMPEGGLTCKKCGGRTFHKEKDILDVWF 534

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKV 290
           D+ ++++                WPADL++ G D     F +    A +     P  K V
Sbjct: 535 DSGSSHVGVLETRP------ELTWPADLYLEGSDQHRGWFKSSLLTAVVARDGKPPYKAV 588

Query: 291 FSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
            +HGF + + G K+SKSLGNV+DP +VI+  G D LR ++        D    ++ LK+ 
Sbjct: 589 LTHGFTVDEQGRKMSKSLGNVVDPADVIKRYGADILRLWVASTDYRH-DMALSENILKQV 647

Query: 350 VNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             AD    I N +   +  +   + D  +       E D   +     V++++ E  +  
Sbjct: 648 --ADAYRKIRNTLRYLLGNLYDFNPDTDMVERDDLLEIDRWQMHRLQEVIRKVTEAYREY 705

Query: 409 LIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQA 464
             H     +     V     Y D  K   L  + P      +   V   V   L  +L  
Sbjct: 706 EYHIVYHTLNNYCAVDLSAVYLDILKD-RLYTSAPASRERRSAQTVLYHVADALIRMLTP 764

Query: 465 FVPKLANKIFDIL 477
            +   A + +  L
Sbjct: 765 ILTFTAEEAYSHL 777



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 52/170 (30%), Gaps = 15/170 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+G A   I+ D++ +   + G D  +  G D HG  I   A
Sbjct: 50  GRPKFVLHDGPPYANGDIHLGTALNKILKDIIVKHATMAGYDAPYVPGWDMHGLPIELRA 109

Query: 63  QNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
                                 +        R+    L +  D     RT          
Sbjct: 110 LKDMNIDRRKIDPLELRAKCYEYAHHWLNVQREQFKRLGVRGDWENPYRTVAPEFEAKEV 169

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IY+G    ++    E    + E+       Y      PV
Sbjct: 170 EVFGAMAAKGYIYRGLKPVYWCPYCETALAEAEIEYNEKTSYSIYVRFPV 219


>gi|119195573|ref|XP_001248390.1| valyl-tRNA synthetase, mitochondrial precursor [Coccidioides
           immitis RS]
          Length = 1045

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 113/365 (30%), Gaps = 46/365 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDD 223
           +      +       Y    E          +    ++  +    +R  F      +  D
Sbjct: 503 WCLSRQLWWGHQAPAYFIQFEGEKGDNSDGNLWVTGRTEEEATEKARAKFPGKKFTLMRD 562

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+           +P  +   G DIL F    +      ++
Sbjct: 563 PD-VLDTWFSSGLWPFSTLGWPKKTH-DFENLYPTSVLETGWDILFFWVARMIMLGIKMT 620

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-- 338
             +P  ++V+ H  I   +G K+SKSLGNV+DP++V+  + +DAL   L+      K+  
Sbjct: 621 GQVPF-REVYCHSLIRDSEGRKMSKSLGNVVDPLDVMRGISLDALHQKLLEGNLAQKEVA 679

Query: 339 ---------------------------------GFYDKDGLKKRVNADLANGIGNLVSRS 365
                                            G  + D           N I       
Sbjct: 680 TATKYQKKAFPKGIPECGADALRFSLVSYTTGGGDINFDIQVIHGYRRFCNKIYQATRYV 739

Query: 366 VSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
           +  +  D+         GA + ++  IL   S   +   E +  +    A + +      
Sbjct: 740 LGKLGSDFQPLASASKTGAESLAERWILHKFSTAARIANEKLDQREFSDAASVLYQYWYS 799

Query: 423 -EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              D + +  K    +    D   +        +     L+   +P ++ +++  L    
Sbjct: 800 QLCDVFIENSKSLLQQDAPTDIQQSAKQTLYTALEGALTLIHPIMPFISEELWQRLPRRP 859

Query: 482 ENRCF 486
           +++  
Sbjct: 860 DDKTI 864



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K +    ++          H+GHA    + D + R+ R+ G  VL+  G D  G     
Sbjct: 117 VKPQGSFVMTFPPPNVTGALHMGHALTNSLQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 176

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                         +  +  ++       +  S+D      T +K 
Sbjct: 177 VVEKILWKNERKTRHDVGRSVLTNMIWDWTHKYHKSITTSMKNMGGSFDWTKEAFTMDKN 236

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + K+ ++G IY+      + 
Sbjct: 237 LTAAVMETFVKLHEEGTIYRANRLVNWC 264


>gi|301633567|gb|ADK87121.1| leucine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 793

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 4/204 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+A   H+GH     I DVL+R+H+  G +V+   G D  G    +
Sbjct: 27  KTKPKYYILDMFPYPSAAGLHLGHVRAYTITDVLSRYHKAKGFNVIHPIGFDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGD 118
            A  +      + D+N  NF +        YD  +   TT+ R++   + ++ ++ + G 
Sbjct: 87  YAIASNKHPGDWTDKNITNFIEQLTAFGFDYDYQLSLKTTDPRYYQYTQWIFGQLFEAGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++EV   ++G   + +   PV   + + +  +++A+ + LL
Sbjct: 147 AEVKEIDVNWCAELGTVLANEEVLIDSNGNAVSERGEFPVTKRKMKQWVLKITAFAESLL 206

Query: 178 SYYESHPEFILPIERRNEVISFVK 201
           +            E +   I   +
Sbjct: 207 NGLAELDWHQSIKEMQTNWIGKSE 230



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 113/348 (32%), Gaps = 50/348 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFF-RLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                Q Y  +  P+ + E       +        L+ Y+       P+ R  E     +
Sbjct: 406 WIFSRQRYWGEPFPILFDENNQPHLVKELPVTLPALANYQPDGSTNPPLWRNQEWAKVKQ 465

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                   +     W         Y+M +      N                ++ P DL+
Sbjct: 466 GNQTFTRETSTMPQWAGSCWYYLGYLMLI-----NNENFWPIDSKEAKDLFERYLPVDLY 520

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y   +         ++   P  K +     +   G+K+SKS GN I+P
Sbjct: 521 VGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPFKKLINQGMVLGPDGKKMSKSKGNTINP 580

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +I+  G DALR +L+          +  DGL         NG+   + R  +   K  
Sbjct: 581 TPLIDSHGADALRLYLMFMGPISAALTWLDDGL---------NGMRRWLDRVHNFFHK-- 629

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                        D+  +   +  L+   E+++ Q ++  ++Q++  ++ + +       
Sbjct: 630 -----ENIIKETVDQETVYGYNLFLKRSYEHLEKQELNLVISQMMIFLNLLYK------- 677

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                           +T+   +    +L  F P LA ++   L +  
Sbjct: 678 -------------TKQLTLAYAKGFLTVLSFFAPYLAEELNAKLGMEP 712


>gi|288904357|ref|YP_003429578.1| leucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731082|emb|CBI12628.1| leucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 833

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAQNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEDLDWPESIKDMQRNWI 224



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 97/302 (32%), Gaps = 79/302 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D+++ G +    H +Y   +         +   
Sbjct: 499 WYFLRYIDPHNDEKLADEELLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 558

Query: 284 LPLPK---------------------------------KVFSHGFILHKGEKISKSLGNV 310
            P  K                                  + +   +     K+SKSL NV
Sbjct: 559 EPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNV 618

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E  G D LR + +          + ++GL+              + R   ++ 
Sbjct: 619 VNPDDVVEHYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLLT 669

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     E++ ++  V +  ++ + E ++    + A+AQ++  V+  +     
Sbjct: 670 --------TKEIVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAAN----- 716

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  K +         +  +  +    LL  F P L+ +++  L  + E+  + +  
Sbjct: 717 -------KEDK--------LFADYAKGFVQLLAPFAPHLSEELWQTLTQSGESISYVAWP 761

Query: 491 QR 492
             
Sbjct: 762 TW 763


>gi|182415676|ref|YP_001820742.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842890|gb|ACB77142.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 857

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    HIGH       D+LAR  R  G +VL   G D  G    +
Sbjct: 33  SSKPKFYVLDMFPYPSGAGLHIGHPEGYTATDILARAKRAQGFNVLHPIGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G         N  NFR     L  SYD    I TT+ ++    + ++ ++  +G 
Sbjct: 93  HAVKTGTHPATNTQNNITNFRRQIKALGFSYDWEREIDTTDPKYFRWTQWIFLQLFKRGL 152

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y      W+         ++EV  G           PV+      +  R++AY ++LL+
Sbjct: 153 AYVDERPVWWCPELRTVLANEEVVDGKSEVGGF----PVERRNLRQWVLRITAYAERLLA 208

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             ++   +    +R  E       G
Sbjct: 209 DLKT-VNWPESTKRMQEAWIGRSEG 232



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 37/228 (16%)

Query: 259 DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           DL+V G +    H +Y   +         +  + P  +       +   GEK+SKS GNV
Sbjct: 575 DLYVGGAEHAVLHLLYARFWHKVLFDLGVVPQSEPFTRLFHQGIILGEDGEKMSKSRGNV 634

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P  +I   G D LR +L+          +    ++         G+   + +     +
Sbjct: 635 VNPDTIIASHGTDTLRLYLMFLGPLEAMKPWSMQQIE---------GVHRFLQKVWRECI 685

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                + P   A       ++ V    ++++ E+++    + A++Q++   +        
Sbjct: 686 GPDGKVNPKISAQAAEPAEVIKVLHETIKKVGEDIEALRFNTAISQMMICANA------- 738

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                              V+   +     LL  F P LA +++  L 
Sbjct: 739 -------------LQKSPQVSRSTMLSFLQLLAPFAPHLAEELWQRLG 773


>gi|13508123|ref|NP_110072.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501026|sp|P75398|SYL_MYCPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1674141|gb|AAB96101.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 793

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 4/204 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+A   H+GH     I DVL+R+H+  G +V+   G D  G    +
Sbjct: 27  KTKPKYYILDMFPYPSAAGLHLGHVRAYTITDVLSRYHKAKGFNVIHPIGFDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGD 118
            A  +      + D+N  NF +        YD  +   TT+ R++   + ++ ++ + G 
Sbjct: 87  YAIASNKHPGDWTDKNITNFIEQLTAFGFDYDYQLSLKTTDPRYYQYTQWIFGQLFEAGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++EV   ++G   + +   PV   + + +  +++A+ + LL
Sbjct: 147 AEVKEIDVNWCAELGTVLANEEVLIDSNGNAVSERGEFPVTKRKMKQWVLKITAFAESLL 206

Query: 178 SYYESHPEFILPIERRNEVISFVK 201
           +            E +   I   +
Sbjct: 207 NGLAELDWHQSIKEMQTNWIGKSE 230



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 113/348 (32%), Gaps = 50/348 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFF-RLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                Q Y  +  P+ + E       +        L+ Y+       P+ R  E     +
Sbjct: 406 WIFSRQRYWGEPFPILFDENNQPHLVKELPVTLPALANYQPDGSTNPPLWRNQEWAKVKQ 465

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                   +     W         Y+M +      N                ++ P DL+
Sbjct: 466 GNQTFTRETSTMPQWAGSCWYYLGYLMLI-----NNENFWPIDSREAKDLFERYLPVDLY 520

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y   +         ++   P  K +     +   G+K+SKS GN I+P
Sbjct: 521 VGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPFKKLINQGMVLGPDGKKMSKSKGNTINP 580

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +I+  G DALR +L+          +  DGL         NG+   + R  +   K  
Sbjct: 581 TPLIDSHGADALRLYLMFMGPISAALTWLDDGL---------NGMRRWLDRVHNFFHK-- 629

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                        D+  +   +  L+   E+++ Q ++  ++Q++  ++ + +       
Sbjct: 630 -----ENIIKETVDQETVYGYNLFLKRSFEHLEKQELNLVISQMMIFLNLLYK------- 677

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                           +T+   +    +L  F P LA ++   L +  
Sbjct: 678 -------------TKQLTLAYAKGFLTVLSFFAPYLAEELNAKLGMEP 712


>gi|325977354|ref|YP_004287070.1| leucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177282|emb|CBZ47326.1| leuS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 833

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAQNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEDLDWPESIKDMQRNWI 224



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 98/302 (32%), Gaps = 79/302 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D+++ G +    H +Y   +         +   
Sbjct: 499 WYFLRYIDPHNDEKLADEELLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 558

Query: 284 LPLPK---------------------------------KVFSHGFILHKGEKISKSLGNV 310
            P  K                                  + +   +     K+SKSL NV
Sbjct: 559 EPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNV 618

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E  G D LR + +          + ++GL+        + I  L++       
Sbjct: 619 VNPDDVVEHYGADTLRVYEMFMGPLDASIAWSEEGLEGS--RKFLDRIYRLLT------- 669

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     E++ ++  V +  ++ + E ++    + A+AQ++  V+  +     
Sbjct: 670 --------TKEIVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAAN----- 716

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  K +         +  +  +    LL  F P L+ +++  L  + E+  + +  
Sbjct: 717 -------KEDK--------LFADYAKGFVQLLAPFAPHLSEELWQTLTQSGESISYVAWP 761

Query: 491 QR 492
             
Sbjct: 762 TW 763


>gi|257873265|ref|ZP_05652918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257807429|gb|EEV36251.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 804

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYD----VIRKPMRQWMLKITAYADRLLDD 204

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 205 LEEVDWPESIKEMQRNWI 222



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 132/413 (31%), Gaps = 64/413 (15%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +        +   G++ +  Y+      +  + +  +     +      + 
Sbjct: 341 HDERDHEFAKTFGLEIIPVLAGGNVEESAYTEDGLHINSDFLDGLDKETAIEKMVAWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +   K+     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTTTTLPEDQLPLRLPKTDNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP----DGSKAK 254
            ++    +    +                M  W    + Y        N     D  K K
Sbjct: 461 GESPLANVTDWVNVTDPETGKKGRRETNTMPQWA-GSSWYFLRFIDPHNKSVLADYDKLK 519

Query: 255 FW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISK 305
            W P D+++ G +    H +Y   +         +    P  K       +    EK+SK
Sbjct: 520 RWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +VI + G D LR + +          ++++GL+              + R 
Sbjct: 580 SRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLEGS---------RKFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +I+ +   M      F   D  +  V  + ++++ E+ +    + A++Q++  V+E  
Sbjct: 631 WRLIVDENGKMRDRITTFN--DGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMVFVNEAY 688

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +                       +  E +     LL    P +  +++ IL 
Sbjct: 689 K--------------------ADALPYEYVEGFVQLLAPIAPHIGEELWSILG 721


>gi|229032397|ref|ZP_04188367.1| Leucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728899|gb|EEL79905.1| Leucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 802

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/427 (12%), Positives = 144/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQENGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|241889244|ref|ZP_04776547.1| leucyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864081|gb|EER68460.1| leucyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 809

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK +      YP+    H+GH       D+L+R+ R +G +VL   G D  G    + 
Sbjct: 29  TKEKFFALDMFPYPSGAGLHVGHPEGYTATDILSRYKRANGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F   N   FR     L  SY  D  + TT+  ++   + ++KK+ +KG  
Sbjct: 89  ALDTGNDPRDFTKTNIDTFRRQIKELGFSYDWDREVNTTDPNYYKWTQWIFKKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +        +++EV  G          +PV+      +  +++ Y +KLL+ 
Sbjct: 149 YVDEMPVNWCPALGTVLSNEEVIDGKS----ERGGHPVERRPMRQWVLKITDYAEKLLAD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDILDW 210



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 106/274 (38%), Gaps = 51/274 (18%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K+W P D+++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNDEMFADPEKLKYWLPVDVYIGGAEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGE-----KISKSLGNVIDPIEVIEEVGVDALRYFL 329
                +    P  K +F+ G IL +G+     K+SKS GNV++P ++I   G D LR + 
Sbjct: 549 YDLGLVPTREPFQK-LFNQGMILAEGKDGRPEKMSKSKGNVVNPDDIIVSHGADTLRVYE 607

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +          + ++GL         +G    + R   + + D +          + +E 
Sbjct: 608 MFMGPLDASIAWSENGL---------DGSRRFLDRVYRLFV-DEETGKVNDKVQDKDNEE 657

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKTNPDRASTV 447
           +    +  ++++ E+++    + A++Q++  V++  +  Y     P +            
Sbjct: 658 LEVSYNFTVKKVSEDIEILGFNTAISQLMVFVNDCYKAEYI----PRKYALG-------- 705

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                        LL  F P LA ++++I    +
Sbjct: 706 ----------FIQLLAPFAPHLAEEMWEIYGNTE 729


>gi|189459409|ref|ZP_03008194.1| hypothetical protein BACCOP_00032 [Bacteroides coprocola DSM 17136]
 gi|189433866|gb|EDV02851.1| hypothetical protein BACCOP_00032 [Bacteroides coprocola DSM 17136]
          Length = 1162

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 103/270 (38%), Gaps = 14/270 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y            ++PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQLHYPFENKEIVDNRSYYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVAYKNVISNGLVLDKNGNKMSKRLGNAVDPFGAIEKFGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESIL 391
              +  +D DG+ + V       + N  S        D   Y           E D  IL
Sbjct: 743 PWDNLKFDTDGVDE-VRRKFFGTLYNTYSFFALYANVDGFTYAEADVPVVERPEIDRWIL 801

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           S+ + +++++     +    +A   +   V++   + Y   + ++ W    +  D+ S  
Sbjct: 802 SLLNSLIKDVDACYNDYEPTKAGRLITDFVNDNLSNWYVRLNRKRFWGSSMS-ADKLSA- 859

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +  +A L+    P  A++++  L
Sbjct: 860 YQTLYTCLETVAKLMAPIAPFYADRLYMDL 889



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 61/209 (29%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   RF  + G  V    G D HG  
Sbjct: 34  MTEREGHPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRFKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  + +     M   +D+       
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNKHCRTDVMKFTKEWTDLTHKMGYWVDLENPYI-- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLYGKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDLTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMAEWGTPYFIAWTTTPW 239


>gi|1351179|sp|P49696|SYVC_FUGRU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
            ligase; Short=ValRS
 gi|1041396|emb|CAA62967.1| valyl-tRNA synthetase [Takifugu rubripes]
          Length = 1217

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 132/423 (31%), Gaps = 100/423 (23%)

Query: 150  YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             +   + V+ + +  ++   S    +           I+P        +++   ++D  +
Sbjct: 610  CSRSKDIVEPLMKPQWYVSCSDMGKQAADAVREGRLKIIPDHHSQTWFNWMD-NIRDWCI 668

Query: 210  SRKTFDWGIKIP------------------------------------------------ 221
            SR+   WG +IP                                                
Sbjct: 669  SRQ-LWWGHRIPAYFITVSDPSVKPGEDMDGHYRVSGRTPEEAREKAAKRFNVSPDKIAL 727

Query: 222  DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
               + ++  W  +  N  +  G+ +  +     F+P  L   G DIL F    +      
Sbjct: 728  RQDEDVLDTWFSSGINPFSILGWPNETEDLNV-FYPGTLLETGHDILFFWVARMVMMGLK 786

Query: 280  LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE------------------------ 315
            L+  LP  +           G K+SKSLGNVIDP++                        
Sbjct: 787  LTGKLPFKEVYHCAVVRDAHGRKMSKSLGNVIDPLDDHIGIALEGLHAQLMDTNLDPLEV 846

Query: 316  -------------VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                          I E G DALR+ L    + G+D   D + +         N + N V
Sbjct: 847  EKPKKVQKADYPNCIPECGTDALRFALCAYTSQGRDINLDVNRILG--YRHFCNKLWNAV 904

Query: 363  SRSVSMILKDYDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              ++  +   +     +P    ES  D  ILS  S  + +     +          + + 
Sbjct: 905  KFAMRTLGDQFVPADTSPAEREESVSDRWILSRLSTAVAQCDAAFRTYDFPAITTAIYNF 964

Query: 421  V--SEVDRYFDAQKP-WELKKTNP--DRASTVLYVTVE-VIRQLAILLQAFVPKLANKIF 474
                  D Y ++ KP +   K +   +R + V   T+   +     LL   +P +  +++
Sbjct: 965  WLYELCDVYLESVKPVFIKAKEDGSCERPAAVCRQTLYTCLEVGLRLLAPLMPFVTEELY 1024

Query: 475  DIL 477
              L
Sbjct: 1025 QRL 1027



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 19/157 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 286 FMMCIPPPNVTGSLHLGHALTNAIQDTLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 345

Query: 67  VTTK---------------VFVDQNSR--NFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
           +  K               V+  +N +          L   + +D    T + +     +
Sbjct: 346 MREKGTSRHDLGREKFIEEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQ 405

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             + ++ D+G IY+      +S    +  +D EV K 
Sbjct: 406 EAFIRMHDEGVIYRSKRLVNWSCSLNSAISDIEVDKN 442


>gi|327439174|dbj|BAK15539.1| leucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 804

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       D+L+RF R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   F+   + L  SY  D  I TT+  ++   + ++ K+ +    
Sbjct: 89  ALDTGNDPAEFTAKNIATFKRQINELGFSYDWDREINTTDPSYYKWTQWIFTKLVEMDLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++EV  G          +PV       +  R++ Y D+L+  
Sbjct: 149 YVDEVAVNWCEALGTVLANEEVIDG----VSERGGHPVVRRPMRQWVLRITKYADRLVDD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
                      E +   I   +
Sbjct: 205 LVDVDWPESIKEMQRNWIGRSE 226



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 143/428 (33%), Gaps = 66/428 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +        + + GDI    ++G  +  +  + N      G          
Sbjct: 341 HDERDYEFAKEFNLEIIPVLEGGDIENEAFTGDGAHINSDFLNGLNKADGIAKAIEWLVE 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V           + F    Y  + +         +  I      +   K+     S +
Sbjct: 401 NGVGEKKITYRLRDWLFSRQRYWGEPIPVIHWEDGTMTTIPVEELPLELPKTTNIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKF 255
            ++    I+   +                M  W         Y+         D    K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYFLRYIDPKNDQALADPELLKH 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG-EKISK 305
           W P D+++ G +    H +Y   +         +    P  K +F+ G IL +G EK+SK
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGLVHTKEPFQK-LFNQGMILGEGNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P ++I   G D LR + +          +  +GL         +G    + R 
Sbjct: 580 SKGNVVNPDDIIVSHGADTLRLYEMFMGPLEASVAWSTNGL---------DGARRFLDRI 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             + +   D           +D ++  V  + ++++ E+ +    + A++Q++  +++  
Sbjct: 631 WRLFV--TDEGKLAAKVQDSADTTLEKVYHQTVKKVTEDYEGIRFNTAISQMMVFINDCY 688

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR- 484
           +                  + V+    E  +    LL    P +A +++ IL   D    
Sbjct: 689 K------------------AEVIPT--EYAKGFVKLLSPIAPHIAEELWSILGHEDTITY 728

Query: 485 -CFQSLDQ 491
             + + D+
Sbjct: 729 ATWPTFDE 736


>gi|193794300|gb|ACF21362.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794310|gb|ACF21367.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794324|gb|ACF21374.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794376|gb|ACF21400.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794450|gb|ACF21437.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794470|gb|ACF21447.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794474|gb|ACF21449.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|159469446|ref|XP_001692874.1| valyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158277676|gb|EDP03443.1| valyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 574

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/376 (15%), Positives = 109/376 (28%), Gaps = 61/376 (16%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN-------------EVISFVKSGLK 205
             E E  +FR            +      +P                   V+   K   +
Sbjct: 201 PKEFEATWFRWLENIRDWCISRQLWWGHRIPAYYVASGRPGMPSEDMGRWVVGRTKEEAE 260

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
             + ++     G       + ++  W  +     +  G+ +       KF+P  L   G 
Sbjct: 261 AAARAKYPDRAGAIKLVQDEDVLDTWFSSGLFPFSVFGWPEGTP-DLDKFYPTSLLETGH 319

Query: 266 DILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DIL F    +      L+  +P  +           G K+SKSLGNVIDP+ VIE + + 
Sbjct: 320 DILFFWVARMVMMGIQLTGKVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPLHVIEGISLQ 379

Query: 324 ALRYFLV------------------------------------REIACGKDGFYDKDGLK 347
            L   L                                           +D   D   + 
Sbjct: 380 GLHDTLAGGNLDPKVGQAGEGVNIGYRQPFPLLIMNATSQSPPTPNPQARDINLDIKRVV 439

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQEIRE 403
                   N + N +  ++  + + +        A    F  +   +LS  +  +  + +
Sbjct: 440 A--YRHWCNKLWNAIKFAMMNLGEGFAAPERPLDAEAPGFPPACRWVLSRLNVAVTSMVQ 497

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            M+      A  +  +       D + +  KP  +   + D            +     L
Sbjct: 498 AMEAYDFATATQRAYAFWQNEVCDVFIEVMKP-VMAFDDADPKKLTRQTLWTCLDSGLRL 556

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  +++  L
Sbjct: 557 LHPFMPFVTEELWQRL 572


>gi|145492782|ref|XP_001432388.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399499|emb|CAK64991.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1039

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 77/459 (16%), Positives = 144/459 (31%), Gaps = 101/459 (22%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G +   C         +     D+          +   + ++ M +  ++      + ++
Sbjct: 411 GMMRFDCRRQMEEDMKQLGLYRDKTPNQMRLGLCSRSKDVIEPMIKPQWYVNCQHIKQRM 470

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG------------------- 217
           +   ++    ++P +  NE   ++  GL+D  +SR+   WG                   
Sbjct: 471 IDVVKNGELVLIPSDYENEWFRWMD-GLRDWCISRQ-IWWGHRCPAYLVSINGNLPDTSN 528

Query: 218 ---------------------------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                      IK+  D   ++  W  +     +T G+ D    
Sbjct: 529 QDNWIVARSEEEALQKAIAKYKLPAEQIKLSQDED-VLDTWFSSGLFPFSTFGWPDVNHP 587

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKIS 304
               F+P  +   G DIL F    W A ++  +L    KV      LH       G+K+S
Sbjct: 588 DFKAFFPNTILETGWDILFF----WVAKMVQFSLEFFDKVPFKYVFLHPLIRDKDGKKMS 643

Query: 305 KSLGNVIDPIEVI-------------------------------------EEVGVDALRY 327
           KSLGNVIDP+E+I                                      E G DALR+
Sbjct: 644 KSLGNVIDPLEIIDGTSLENLKSKIYEGNLSKDEVERAIKQKEEEFPNGIPECGGDALRF 703

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
            L+  +    +   D   +         N I N    +   + KD + +          +
Sbjct: 704 GLLSYLQKTPNINMDVKHIIG--YRQFCNKIWNSCRFAFPKLTKDVNYVKLELNNLQLIN 761

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS 445
           + IL   ++ +  +     +    +A             D Y +  K     K    ++ 
Sbjct: 762 QWILVKLNQAITGVNAAFDDYEFGQATQSFHQFWLYEFCDIYLEGIKNILSDKNQDQKSK 821

Query: 446 -TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
                  + V+ Q   LL   +P L+ +++  L    E+
Sbjct: 822 LETQQTLLTVLDQGLRLLHPMMPYLSEELWQKLPFDKED 860



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 18/161 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K  ++  +           H+GH     I D L R HR  G    +  GTD  G     
Sbjct: 114 LKNDKRYVMVLPPPNVTGYLHLGHGLTSAIEDSLTRIHRQRGYATCYLPGTDHAGIATQT 173

Query: 61  AAQNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
             + A                      + +++     +    +   + +D +  T +++ 
Sbjct: 174 VVEKALAKQQLNKWEMGREKFLEKVWDWKEKHGAQILEQLRRVGSSLDWDRYHFTMDEQL 233

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  +  + +KG IY+      +S + +   +D EV  
Sbjct: 234 KKAVTEAFVLLYEKGLIYRATRLVNWSCQLKTAISDIEVTY 274


>gi|88801839|ref|ZP_01117367.1| isoleucyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782497|gb|EAR13674.1| isoleucyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 1135

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 90/277 (32%), Gaps = 8/277 (2%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                 ++ VW D+ +       Y           + +PAD    G D     F+ ++  
Sbjct: 598 MKRENDLIDVWFDSGSMPYAQWHYPFENKEKIDSNESFPADFIAEGVDQTRGWFYTLHAI 657

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A ++  ++     V +   +   G K+SK LGN  DP   +   G DA R++++      
Sbjct: 658 ATMVFDSVAYKNVVSNGLVLDKNGHKMSKRLGNATDPFTTLATYGADATRWYMISNANPW 717

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            +  +D +G+++                ++   +  +             E D  +LS  
Sbjct: 718 DNLKFDLEGIEEVKRKFFGTLYNTYSFFTLYTNIDGFSYKEADVPLEERPELDRWVLSEL 777

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
             ++ ++          RA   +     +   + Y    +    K        +      
Sbjct: 778 HTLIHKVDTFYSEYEPTRAARAISDFTQDYLSNWYVRLSRRRFWKGDYQADKISAYQTLY 837

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +  +A L     P   ++++  L    +    +S+
Sbjct: 838 ICMNTIAKLAAPIAPFFMDRLYQDLNSVTKKEASESI 874



 Score = 54.0 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 19/146 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E           N  P + H     I D+  R+  + G  V    G D HG  I    + 
Sbjct: 41  EPYVFFEGPPSANGLPGVHHVLARAIKDIFPRYKTMKGYQVKRKAGWDTHGLPIELGVEK 100

Query: 65  AGVTTKVFV-------DQNSRNFRDMADVLDISYD------------DFIRTTEKRHHDT 105
               TK  +       D N+   + +    DI  D            D   T E ++ ++
Sbjct: 101 ELGITKEDIGNKISVEDYNAACRKAVMRYTDIWNDLTQKMGYWVDMEDPYITYEPKYMES 160

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLR 131
              L K+I +K  IYKG     YS +
Sbjct: 161 VWWLLKEIYNKKLIYKGYTIQPYSPK 186


>gi|302386082|ref|YP_003821904.1| leucyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196710|gb|ADL04281.1| leucyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 804

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 29  KKKKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQILKGHYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+   +   + ++ ++  KG  
Sbjct: 89  AIKMGVHPAKSTAENVSNIKRQINEIAAVYDWDMEVNTTDPEFYKWTQWIFVQMFKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY D+LL  
Sbjct: 149 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTGVTKKNLRQWMLKITAYADRLLDD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 205 LDKLDWPEKVKKMQTEWI 222



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 116/343 (33%), Gaps = 56/343 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 414 FKLRDWVFSRQRYWGEPIPIIHCPHCGNVPVPEDQLPLTLPEVESYQPTGTGESPLADID 473

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +    +   P       M  W         Y+ +    +     KAK + P D+++ 
Sbjct: 474 EWVNTTCPVCGAPAKRETNTMPQWAGSSWYFLRYVDSHNDQELVSKEKAKKYLPVDMYIG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 534 GVEHAVLHLLYSRFYTKFLNDIGVVDFDEPFTKLFNQGMINGKNGIKMSKSKGNVVSPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G DALR + +       D  +D  G++         G+G  ++R   ++ +    
Sbjct: 594 LVRDYGCDALRMYELFVGPPELDAEWDDRGIE---------GVGRFLNRFWKLVTE---- 640

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
              +     E    +L + S+++ +I +      ++  ++  +      +++ +      
Sbjct: 641 ---SSNKDVEPTREMLRLRSKLIFDIEQRFSQFNLNTVISGFMEYN---NKFIEM----- 689

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   A     +  E ++   +L+  F P +  +++  L 
Sbjct: 690 --------AQKTGGIDKETLKAFVVLVAPFAPHIGEELWQRLG 724


>gi|229019973|ref|ZP_04176765.1| Leucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026208|ref|ZP_04182570.1| Leucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735092|gb|EEL85725.1| Leucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741322|gb|EEL91530.1| Leucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 802

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 54/427 (12%), Positives = 146/427 (34%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   +          ++++     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQENGELSEKITDTP--NKNLEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L  ++     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYSETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|198275943|ref|ZP_03208474.1| hypothetical protein BACPLE_02126 [Bacteroides plebeius DSM 17135]
 gi|198271572|gb|EDY95842.1| hypothetical protein BACPLE_02126 [Bacteroides plebeius DSM 17135]
          Length = 1162

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 108/302 (35%), Gaps = 15/302 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 592 FQPGVYNKENYDKIDLHRPYVDDIILVSASGKPMKRESD-LIDVWFDSGAMPYAQLHYPF 650

Query: 247 NPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                     ++PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELVDSRSYYPADFIAEGVDQTRGWFFTLHAIATMVFDSVAYKNVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+ + V       + N  
Sbjct: 711 MSKRLGNAVDPFGAIEKFGSDPLRWYMITNSSPWDNLKFDTDGVDE-VRRKFFGTLYNTY 769

Query: 363 SRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           S        D   Y           E D  ILS+ + +++ +     +    +A   +  
Sbjct: 770 SFFALYANVDGFTYAEEDVPMNERPEIDRWILSLLNSLIKNVDACFADYEPTKAGRLITD 829

Query: 420 LVSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            V++   + Y   + ++ W    +  D+ S         +  +A L+    P  A++++ 
Sbjct: 830 FVNDNLSNWYVRLNRKRFWGSAMS-TDKLSA-YQTLYTCLETVAKLMAPIAPFYADRLYM 887

Query: 476 IL 477
            L
Sbjct: 888 DL 889



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 61/209 (29%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   RF  + G  V    G D HG  
Sbjct: 34  MTEREGYPSFVFYEGPPSANGMPGIHHVMARTIKDTFCRFKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  + +     M   +D+       
Sbjct: 94  VELGVEKALGITKEDIGKTISVADYNKHCRTDVMKFTKEWTDLTHKMGYWVDLENPYI-- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L +++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLQQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDLTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMAEWGTPYFIAWTTTPW 239


>gi|257877008|ref|ZP_05656661.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811174|gb|EEV39994.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 804

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYD----VIRKPMRQWMLKITAYADRLLDD 204

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 205 LEEVDWPESIKEMQRNWI 222



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 132/413 (31%), Gaps = 64/413 (15%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +        +   G++ +  Y+      +  + +  +     +      + 
Sbjct: 341 HDERDHEFAKTFGLEIIPVLAGGNVEESAYTEDGLHINSDFLDGLDKETAIEKMVAWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +   K+     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTTTTLPEDQLPLRLPKTDNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP----DGSKAK 254
            ++    +    +                M  W    + Y        N     D  K K
Sbjct: 461 GESPLANVTDWVNVTDPETGKKGRRETNTMPQWA-GSSWYFLRFIDPHNKSVLADYDKLK 519

Query: 255 FW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISK 305
            W P D+++ G +    H +Y   +         +    P  K       +    EK+SK
Sbjct: 520 RWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +VI + G D LR + +          ++++GL+              + R 
Sbjct: 580 SRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLEGS---------RKFLDRV 630

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +I+ +   M      F   D  +  V  + ++++ E+ +    + A++Q++  V+E  
Sbjct: 631 WRLIVDENGKMRDRITTFN--DGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMVFVNEAY 688

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +                       +  E +     LL    P +  +++ IL 
Sbjct: 689 K--------------------ADALPYEYVEGFVQLLAPIAPHIGEELWSILG 721


>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 911

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 67/462 (14%), Positives = 148/462 (32%), Gaps = 37/462 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SY 91
           F+     ++      D  G     A +  G+  +       +   +   +L +     SY
Sbjct: 334 FNAGRKYNLEVLCPVDYRGYMTKDAFEFEGMYYEDANKAVGQKLEEKGALLGLKFITHSY 393

Query: 92  DDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               RT +        +      + KG + +      +          + +   AD    
Sbjct: 394 PHDWRTKKPIIFRATEQWFASIEALKGQMMEQIKEVNWLPAWGEVRLGNMIKDRADWCIS 453

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +             F     +  L     +H   +   +  N         L     +
Sbjct: 454 RQRV-----WGVPIPVFYAEDGEAILDESVINHVANLFREKGSNIWFELEAEELLPAGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G         IM VW D+ +++ +           +   +PADL++ G D    
Sbjct: 509 HPGSPNG--KFRKETDIMDVWFDSGSSHHSVLV-------ERGLPYPADLYLEGSDQYRG 559

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++       ++   P    V     +  +G K+SKS+GNVIDP+++I+  G D +R +
Sbjct: 560 WFNSSLSTGVAMTGRAPYKTVVSHGFVLDGQGRKMSKSIGNVIDPLKLIKIYGADIVRLW 619

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AF 383
           +        D    +D +K+   +         +  +   +L +     P          
Sbjct: 620 VASVDYQA-DVRISEDLIKQVAES------YRKMRNTFRFLLGNLFDFNPETDLVAYEDL 672

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTN 440
            E D+ ++   + + +E++   +          V + +       Y D  K    ++K +
Sbjct: 673 NEVDQFMMIRLNELTKELKSAYEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEKAD 732

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                ++  +    +  +  LL   +P  A++++  +    E
Sbjct: 733 SQARRSIQTILYHHVYDMCRLLAPVIPHTADEVYSYIPGHTE 774



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++    +     Y N   H+GHA   I+ D + RF  +DG    +  G D HG  I +A
Sbjct: 45  QDKTPFVLHDGPPYANGNIHMGHALNKILKDFVVRFKNMDGYYAPYIPGWDTHGLPIEQA 104

Query: 62  AQNAGV-------------TTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
             N                  K +  +     +     L +   +D+   T +K +    
Sbjct: 105 LTNNKKVNRKEKTVAEFRELCKEYALEQVEGQKTQFKRLGVLGDWDNPYITLQKEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +++ K+  +G IYKG    ++S   E    + E+     
Sbjct: 165 ILVFGKMVKEGLIYKGLKPIYWSPSSETALAEAEIEYHDK 204


>gi|306830390|ref|ZP_07463560.1| leucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427415|gb|EFM30517.1| leucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 837

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 34  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 94  AMDTGNDPAEFTAQNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 154 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 210

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 211 LEDLDWPESIKDMQRNWI 228



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 97/302 (32%), Gaps = 79/302 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D+++ G +    H +Y   +         +   
Sbjct: 503 WYFLRYIDPHNDEKLADEELLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 562

Query: 284 LPLPK---------------------------------KVFSHGFILHKGEKISKSLGNV 310
            P  K                                  + +   +     K+SKSL NV
Sbjct: 563 EPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNV 622

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E  G D LR + +          + ++GL+              + R   ++ 
Sbjct: 623 VNPDDVVEHYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLLT 673

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     E++ ++  V +  ++ + E ++    + A+AQ++  V+  +     
Sbjct: 674 --------TKEIVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAAN----- 720

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  K +         +  +  +    LL  F P L+ +++  L  + E+  + +  
Sbjct: 721 -------KEDK--------LFADYAKGFVQLLAPFAPHLSEELWQTLTQSGESISYVAWP 765

Query: 491 QR 492
             
Sbjct: 766 TW 767


>gi|50365307|ref|YP_053732.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
 gi|60390693|sp|Q6F0X5|SYL_MESFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50363863|gb|AAT75848.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 801

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 3/184 (1%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+    H+GH       DV +R+ R++G DVL   G D  G    + A 
Sbjct: 30  KKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSRYKRMNGYDVLHPMGWDAFGLPAEQYAL 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G     F  +N + F+    ++  SY  D  I T    ++   + ++ ++  KG    
Sbjct: 90  KTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEISTANPNYYKITQWIFNQLYKKGLAEN 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +DE+ +           +PV   +   +  +++ Y D+LL   +
Sbjct: 150 RDVEVNWCQELGTVLANDEIIEKDGLMVSERGEHPVTKRKMRQWVLKITEYADRLLEGLD 209

Query: 182 SHPE 185
               
Sbjct: 210 ELEW 213



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 91/238 (38%), Gaps = 44/238 (18%)

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKI 303
             K+ P DL+V G++    H +Y   +              P  +       +   G K+
Sbjct: 520 FEKWMPVDLYVGGQEHAVGHLLYARFWNYVLYDLGITSVKEPFKQLFNQGMILGPDGRKM 579

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNVI+P +++   G D+LR + +          + +DGL         +     + 
Sbjct: 580 SKSWGNVINPDDIVSTHGADSLRLYEMFMGPLDASLPWSEDGL---------DSALKWIH 630

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R+  M++        T      +D  +  V + V++ + E +++   + A++Q++  V+ 
Sbjct: 631 RAYRMVM--------TTELTDVNDTKLDFVYNDVVKNVSEMIESLKFNTAISQLMIFVNA 682

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           V +              P     V    +E       +L  + P +  ++++ L  A 
Sbjct: 683 VYK-----------HEGP-----VYRPYIEGF---VKMLSIYAPFIGEELWEKLGHAP 721


>gi|312866233|ref|ZP_07726452.1| leucine--tRNA ligase [Streptococcus downei F0415]
 gi|311098206|gb|EFQ56431.1| leucine--tRNA ligase [Streptococcus downei F0415]
          Length = 833

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + 
Sbjct: 30  SKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 207 LEDLDWPESIKEMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +  +    + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     ++D  +  V +  ++ + E ++    + A+A ++
Sbjct: 659 -KFLDRVYRLLT--------TKDITADNDGKLDKVYNETVKSVTEQIEAMKFNTAIASLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++                +A  V Y      +    LL  F P ++ +++  L 
Sbjct: 710 VFVNAANK---------------GKALFVDY-----AQGFVQLLAPFAPHISEELWQKLT 749

Query: 479 VADENRCFQSLDQR 492
            + ++  + +    
Sbjct: 750 NSGDSISYVAWPTW 763


>gi|307069561|ref|YP_003878038.1| putative methionyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482821|gb|ADM89692.1| putative methionyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 535

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 81/390 (20%), Positives = 145/390 (37%), Gaps = 29/390 (7%)

Query: 11  TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
           TA  Y N   H+GH  E I AD+  RF +++   V F    D HG  I     N  +  K
Sbjct: 12  TAFPYINGNLHLGHIMEFIQADIYVRFLKMNKKKVYFIGANDIHGNLINLNFLNKKII-K 70

Query: 71  VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
             ++      +   +  +I Y+++  T    ++    +++        + K     ++  
Sbjct: 71  KNINLILNKRKKNLNYFNIIYNNWYNTNSIENNLFSNLIYYIFYKNKLLIKKKVYQFFDN 130

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQ----------WMEEEGYFFRLSAYQDKLLSYY 180
               Y  D  +        +  Q+              +++   +         KL    
Sbjct: 131 NKNIYLTDRFIKGICPKCLFKNQYGDFCENCNINYDSIYIKNPNFILNNKKPLIKLSKQI 190

Query: 181 ESHPEFILPIERRNEVIS-----------FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
             + +  +  +  NE+++                L   ++SR    +GIKI +      Y
Sbjct: 191 FLNIKNKIFYKIINEILNKKYQKEINKKKREWYNLNIWNISRNKPYFGIKIFNKKNKYFY 250

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANL 284
           VW DA+  YL+    L   +         +      + IGKDI+ FH I     L     
Sbjct: 251 VWWDAIIGYLSCFKNLIKNNKKFKNIIYKNKNIKQTYFIGKDIVYFHIIILQIILKIFKY 310

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-EVGVDALRYFLVRE-IACGKDGFYD 342
               K F HGF+    EK+SK+  N I   + I+  +  + LRY+   +     KD  ++
Sbjct: 311 KTKNKFFIHGFLKINKEKMSKTKKNYILISKYIKLNLNPEYLRYYFASKLNNKIKDINFN 370

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKD 372
                 ++N +L N   N++SR +  I K+
Sbjct: 371 IKDFIYKINNELINKYINIISRIIKFIKKN 400


>gi|221197702|ref|ZP_03570748.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204740|ref|ZP_03577757.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221175597|gb|EEE08027.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221181634|gb|EEE14035.1| valyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 981

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 120/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   +S     + +      G  + 
Sbjct: 429 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARSEEDARAKAAAQGYTG-ALK 487

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 488 RDED-VLDTWFSSALVPFSSLGWPNETP-ELQHFLPSSVLVTGFDIIFFWVARMVMMTTH 545

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 546 FTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLETLVAKRTTGLMNPKQA 605

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 606 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 662

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D  I  P               F+ +D  I+S+  R   +I +   +  
Sbjct: 663 TRFVLMNCEGHDCGIDKPEVCGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYR 722

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                + +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 723 FDNVASSIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 781

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 782 FITEALWQ 789



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 63  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 122

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  +     +   R +    D S + F  T + +  
Sbjct: 123 RQLDAQGVSRHDLGREKFVERVWEWKQKSGSTITGQVRRLGASTDWSREYF--TMDDKMS 180

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 181 AAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 234


>gi|148927744|ref|ZP_01811180.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886907|gb|EDK72441.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 811

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 7/197 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K YI     YP+    H+GH     I D LAR  R+ G +VL   G D  G      A
Sbjct: 31  KPKRYILEYFPYPSGAAMHVGHVRNYTIGDTLARHMRMSGYNVLHPMGWDAFGLPAENYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G++ +  + +N+  F+     +   YD      +++  ++   + L+  +  +G  Y
Sbjct: 91  IKTGISPQQAIKENTGKFKQQLMQMGFGYDWSREFASSDPEYYRWTQWLFLLLYKRGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +     W+   D+    +++V  G            V+      +FF+++ Y D+L    
Sbjct: 151 RKESPQWWCPVDKTVLANEQVENG----RCWRCGTEVEKKALPQWFFKITDYADRLEKDL 206

Query: 181 ESHPEFILPIERRNEVI 197
                       +   I
Sbjct: 207 NEVNWTESIKNMQRNWI 223



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 95/267 (35%), Gaps = 35/267 (13%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL-- 279
           D              +             K K W P D ++ G +    H +Y   +   
Sbjct: 487 DTMDGFACSSWYFLRFADPHNNEKAFAAEKVKHWLPVDDYIGGAEHAVMHLLYARMWTKV 546

Query: 280 ------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-VGVDALRYFLVRE 332
                 +  + P          +   G K+SKS GNVI P ++I++  G DA+R   +  
Sbjct: 547 MFDEGLIDFHEPFKTLRNHGMILAPDGRKMSKSWGNVIAPDDLIKQGYGADAIRIMELFI 606

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
               +   +  +G+          G    + R  ++  +          A   +D  +  
Sbjct: 607 GPWNQSANWSVEGV---------GGAFRFLQRVWTLAQEYLARDDIKGKA---NDILLKR 654

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVT 451
              R ++++ E+++    + A+A ++ LV+ + +         LK+  P + AS     T
Sbjct: 655 ATHRTVKKVTEDLEGLGFNTAIAAMMELVNGLYK---------LKREIPYESASETWQET 705

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
           +E + QL      F P +  +++    
Sbjct: 706 LETLLQLL---APFAPHITEELWQQFG 729


>gi|229099219|ref|ZP_04230151.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105374|ref|ZP_04236019.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229118233|ref|ZP_04247590.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665205|gb|EEL20690.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228678031|gb|EEL32263.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228684200|gb|EEL38146.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 802

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +N    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYMDPNNNEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------ANTLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|161525046|ref|YP_001580058.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350211|ref|YP_001945839.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|160342475|gb|ABX15561.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334233|dbj|BAG43303.1| valyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 955

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 120/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   +S     + +      G  + 
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARSEEDARAKAAAQGYTG-ALK 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSSLGWPNETP-ELQHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLETLVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D  +  P               F+ +D  I+S+  R   +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGLDKPEVCGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                + +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNVASSIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G        
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 60  -----KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHH 103
                +      +  + FV++                R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREQFVERVWEWKQKSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|295399732|ref|ZP_06809713.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978135|gb|EFG53732.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 923

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 84/455 (18%), Positives = 156/455 (34%), Gaps = 32/455 (7%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           GLDV      DE G   ++A    G+         ++   ++  +L +S+       + R
Sbjct: 340 GLDV--LCPVDERGYMTSEAPGFEGLFYDEANKAITQKLEEVGALLKLSFITHSYPHDWR 397

Query: 102 HHD------TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                    T +        +G++ +      +          + +    D      +  
Sbjct: 398 TKKPTIFRATTQWFASIDKIRGELLQAIKETKWIPEWGEIRIHNMIRDRGDWCISRQRA- 456

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                      F     +  +      H   +      N         L     +  +  
Sbjct: 457 ----WGVPIPVFYGENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSP 512

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            GI        IM VW D+ +++                  PADL++ G D     F++ 
Sbjct: 513 NGI--FTKETDIMDVWFDSGSSHQAVLVER------DDLQRPADLYLEGSDQYRGWFNSS 564

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              A  ++   P  K V SHGF+L  +G K+SKSLGNV+ P +V+E++G D LR ++   
Sbjct: 565 LSTAVAVTGKAPY-KAVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASV 623

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESIL 391
                D       LK+   A++   I N     +  +          P     E D  +L
Sbjct: 624 DYQA-DVRISDSILKQV--AEVYRKIRNTFRFMLGNLFDFNPETDAVPVNELREVDRYML 680

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA-STVL 448
              +R+++++++  +          V +   V     Y D  K     +   DRA  ++ 
Sbjct: 681 VKLNRLIEKVKQAYETYDFASIYHDVNNFCTVDLSAFYLDFAKDILYIEAPNDRARRSIQ 740

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            V  E +  L  L+   +P  A ++++ +    E 
Sbjct: 741 TVLYEAVVALTKLVAPILPHTAEEVWEHIPNRKEK 775



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +  +   N R+    L +  D      T  + +     
Sbjct: 105 LTKKGVDRKSMSVAEFRKLCEQYAYEQINNQREQFKRLGVRGDWENPYITLTREYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 214


>gi|193794528|gb|ACF21476.1| methionyl-tRNA synthetase [Actinomyces viscosus]
          Length = 168

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGRI-PEPGELQDIDRALLDAVEAGFTTVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +PD   R +T+L+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPDTQARLATILHTLAQVVADL 166


>gi|15674378|ref|NP_268552.1| leucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|32171582|sp|Q9A1P0|SYL_STRP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13621467|gb|AAK33273.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 833

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G ++L   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNILHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 207 LEEVDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 98/308 (31%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 710 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 749

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 750 ASGESISY 757


>gi|303244593|ref|ZP_07330926.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485019|gb|EFL47950.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 1056

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 142/387 (36%), Gaps = 34/387 (8%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
              T +        K DI +   +  +  +  +  Y N  +     +         P+  
Sbjct: 437 FRATEQWFLNISKIKDDIIEHTKTVDWVPNWVETRYINGVKFVGDWNISRQRYWGIPL-- 494

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                       +  +    YE         E+    +         +         G +
Sbjct: 495 ----------PIWVCEKCGKYEVIGSVEELKEKMINDVPLDDLHKPTMDKVILKCSCGGE 544

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           +   P  ++ VW D+      +                AD  V G D +   F++ +  +
Sbjct: 545 MKRVPD-VLDVWYDSGLAPYASINAKKLKK--------ADFIVEGNDQVTKWFYSQHALS 595

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
            ++  ++P  K +     +   G K+SKSLGNV++P +V+EE G D LRY+L+      +
Sbjct: 596 EIVFNDIPYKKCMMHGFALDENGNKMSKSLGNVVNPDDVVEEYGADLLRYYLLSANKAWE 655

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSR 396
           D  +    L +  +  L N + N  + +V  M+L ++           + D+ I+S  + 
Sbjct: 656 DIRFSYKELGEIKS--LFNTLWNSYAFAVNYMVLDNFVPNDEYMNYLKDEDKWIISKINS 713

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVTV 452
           + +EI E+++   +H    ++   +       Y      + W ++K +P++ S       
Sbjct: 714 LTKEIIEDLEMPHLHSYTWKLREFILNDLSRWYIKLIRSRTW-MEKDDPEKLSA-YQTLY 771

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFV 479
            V+ +L  +L    P ++ KI+  +  
Sbjct: 772 YVLMKLITILAPVAPHISEKIYQNMRT 798



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 20/157 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y      Y +   H+G A+   I D + RF R+   +VL   G D HG  I    +N
Sbjct: 38  PEYYFVDGPPYCSGAIHLGTAWNKTIKDTILRFKRMQKYNVLDKAGWDMHGLPIEVKVEN 97

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F  +N     +    L I   +++     +  + +
Sbjct: 98  EFNIKSKKDIETKIGTTEFIEKCKEFALRNKEIMENQFKNLGIWLDWENAYLPIKNDYIE 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           T     KK  +K  + K    G++  R E    + EV
Sbjct: 158 TGWWSLKKAYEKNLLSKDLRVGYWCPRCETSLAEHEV 194


>gi|289550486|ref|YP_003471390.1| Leucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180018|gb|ADC87263.1| Leucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 804

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALDTGNDPRAFTKQNIQTFKRQIQELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +        +++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPALGTVLSNEEVVDG----VSERGGHPVYRRPMKQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESIKDMQRNWIGRSE 226



 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 107/278 (38%), Gaps = 45/278 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YYLRYIDPHNEQMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                +    P  K +F+ G IL +G EK+SKS GNV++P +++   G D LR + +   
Sbjct: 549 YDLGVVPTKEPFQK-LFNQGMILGEGNEKMSKSKGNVVNPDDIVNSHGADTLRLYEMFMG 607

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
                  + ++GL         +G    + R   + + + D +          ++S+  V
Sbjct: 608 PLDAAIAWSENGL---------DGSRRFLDRVWRLFINEDDSLSQKFVESN--NKSLDKV 656

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            ++ ++++ E+      + A++Q++  ++E  +  +  +P+                   
Sbjct: 657 YNQTVKKVTEDFDTLNFNTAISQLMVFINECYKVDEIYQPYA------------------ 698

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                  +L    P +  +++  L   DE   +Q    
Sbjct: 699 --EGFVKMLAPIAPHIGEELWQKLG-HDETITYQPWPT 733


>gi|257454416|ref|ZP_05619678.1| leucyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448182|gb|EEV23163.1| leucyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 904

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 90/237 (37%), Gaps = 12/237 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++   Y+ +   YP+ + H+GH     I+DVL+R++RL G +VL   G D  G     A
Sbjct: 54  SDKPSRYLLSMFPYPSGKLHMGHVRNYTISDVLSRYYRLKGYEVLQPMGWDAFGMPAENA 113

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    V    +   N  N R     L +S D      T    ++   + L+ ++  KG +
Sbjct: 114 AIANAVAPAAWTFSNIDNMRAQLKSLGLSIDWSREFATCTPEYYKWEQWLFVQLFKKGLV 173

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   +  +   D     +++V  G            ++  E   Y+F ++AY D+LL+ 
Sbjct: 174 YKKLSTVNWDPVDNTVLANEQVVDG----RGWRSGALIEKREIPMYYFNITAYADELLND 229

Query: 180 Y------ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                         +                 +L+   KT D     PD    + YV
Sbjct: 230 LDKLEGHWPQQVITMQRNWIGRSEGMEIHFPYNLNGEEKTLDVFTTRPDTLMGVTYV 286



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 75/194 (38%), Gaps = 16/194 (8%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN--ADLANGI 358
           EK+SKS  N +DP   I++ G D +R + +      +   +  DGLK   N    +    
Sbjct: 656 EKMSKSKNNGVDPQATIDQYGADTVRLYTMFTAPVDQTLEWIDDGLKGPYNFLKKVWRYT 715

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQV 417
                      L   +  +    + +++ +S+       + ++ +   +N  ++  ++ +
Sbjct: 716 IEHAHTLAQQSLTAANLSVTDTQSLSKAAKSLRRKTHDTIGKLDDAFGKNLALNTPVSFL 775

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L +E+   F+     +L   N    + +  +T+            + P +A  + + L
Sbjct: 776 MELSNELTA-FEIASDSDLAVANEALITLLTLLTM------------YAPHMAEVLLEEL 822

Query: 478 FVADENRCFQSLDQ 491
            +      + ++D 
Sbjct: 823 GIDVMMLTYPAVDT 836


>gi|229076249|ref|ZP_04209216.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228706898|gb|EEL59104.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 802

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 145/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +N    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYMDPNNNEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------ANTLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|304385164|ref|ZP_07367510.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329358|gb|EFL96578.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 936

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 118/311 (37%), Gaps = 24/311 (7%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDN 247
           E+     S +     ++     G      P         IM VW D+ +++         
Sbjct: 490 ELFEKHGSDIWFEWDAKDLLPEGYTSEHSPNGTFTKETDIMDVWFDSGSSHQGVLA---- 545

Query: 248 PDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                   +PADL + G D     F++    +  +S + P  + +     +  +G K+SK
Sbjct: 546 --KRDYLKYPADLTLEGSDQYRGWFNSSLITSVAMSGHAPYKQVISQGFTLDGQGHKMSK 603

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN I P ++I+++G + +R +++   +   D    +D   K   +D    I N + R 
Sbjct: 604 SLGNTIVPADIIKKMGAEIIRLWVLSIDSS-SDVRVSQDNFVKI--SDSYKKIRNTI-RY 659

Query: 366 VSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
           +     D+D    T         D  +L   + +++EIR++            +++ +  
Sbjct: 660 LLANTADFDPQANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIIT 719

Query: 422 SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                Y D  K     +  +  +  ++  V  +++  L  L+   +P    +I+  L   
Sbjct: 720 DLSAFYLDFAKDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFLSEP 779

Query: 481 DENRCFQSLDQ 491
           +E      + +
Sbjct: 780 EEFVQLAEMPE 790



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 48  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQ 107

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               G   K             +  +     R+    L +   +D+   T +        
Sbjct: 108 LTKEGHDRKKMSTAEFRKLCRDYALKQVDKQREDFKRLGVAAEWDNPYLTLQPSFEAEEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             + K+ + G IY+G    ++S   E+   + EV   
Sbjct: 168 RTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEVEYH 204


>gi|226226805|ref|YP_002760911.1| isoleucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089996|dbj|BAH38441.1| isoleucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 1097

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 95/267 (35%), Gaps = 18/267 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL---- 280
           ++  W D+         Y           +PAD    G D     F+++   A  L    
Sbjct: 554 VIDTWFDSGAMPFAQWHYPFENADKVQAQYPADYICEGVDQTRGWFYSLLAIATTLGDAL 613

Query: 281 -----SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                    P    V +   +   G+K+SKS GNV++P EV+E  G DA+R FLV     
Sbjct: 614 PNNGDDMAAPYRNVVVNDLVLDASGQKMSKSRGNVVNPWEVLERHGADAVRLFLVGSSQV 673

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESIL 391
                +D++ +++     L       V   +     ++        P        D  IL
Sbjct: 674 WVPRRFDENAIRETAGRFLLT--VRNVYNGIFAQYANFGWTPSAADPQIADRPALDRWIL 731

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           S  SRV QE  +++ N     A  +V+  +  +V +++  Q                   
Sbjct: 732 SRLSRVEQEANQHLNNYDATLAARRVMQFMDDDVSKWYVRQSRARFYDVEGADNRAAFAT 791

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             EV+     LL  F P + + +   L
Sbjct: 792 LHEVLTVTCRLLAPFAPFMTDALHRAL 818



 Score = 46.7 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 20/61 (32%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +           N +P I H +   I D+  R   + G  V    G D HG  +    + 
Sbjct: 46  KPFVFFEGPPTANGRPGIHHVFSRTIKDLFCRHRAMQGHFVPRKAGWDTHGLPVEIEVEK 105

Query: 65  A 65
            
Sbjct: 106 E 106


>gi|193794312|gb|ACF21368.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHALAQVVTDL 166


>gi|193794492|gb|ACF21458.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794494|gb|ACF21459.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGRI-PEPAELEDIDRALLDAVEAGFASVGELIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|85680332|gb|ABC72361.1| valyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 932

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 76/452 (16%), Positives = 148/452 (32%), Gaps = 28/452 (6%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE G     A   +G+       +   +            D    T 
Sbjct: 328 WYQAHDLDLRIAIDESGTMTDVAGSYSGLD----STEARESIVADLSESGALLDRRKITH 383

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C    + +     + +  Y       DE      E+    +  +   + N ++
Sbjct: 384 TVNVHERCGTNIEFL-----VKEQWYVKLLDKTDEYLAAGREMEWYPEKMFTRYK-NWIE 437

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            ++ +    R  +       +Y    E ++  E+ +  +  +       S      D  I
Sbjct: 438 GLQWDWAISRQRSSGIPFPVWYCDACEHVVIAEKESLPVDPLSDDPPVESCPACDHDTFI 497

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS-----KAKFWPADLHVIGKDILRFHAI 273
                   +   W  +    L   G+  N +        +  +P +L   G DI+ F   
Sbjct: 498 P----EDDVFDTWATSSLTPLINAGWDWNDNTETIEFGDSGLYPFNLRPQGHDIISFWLF 553

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    EK+SKS GNVI P EVI E  VDA RY+   
Sbjct: 554 HTVVKCYEHTGEVPFDSVMINGMVLDENREKMSKSKGNVIAPDEVITEYPVDAARYW-AA 612

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  Y + G+  R    L   + N       +     D    +       D  +L
Sbjct: 613 GSAVGDDLPYSEKGI--RAGEKLLRKLWNASKLVEDLTTDAPDPETMSHADLEAIDRWLL 670

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           +     +  + E  +++   +A   + S+      D Y +  K    + T  D A+   Y
Sbjct: 671 ARIDTEIARLTEKFESREFSKARDGLRSVFWHTFCDDYLEIAKHRIREGTTGDAAAA--Y 728

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 R+   L    +   + +++  ++V++
Sbjct: 729 TLTVAHRRFLKLFAPILAHASEELWRDMYVSN 760



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I +     +   H GH Y   + D +ARF R+ G DV F  G D++G    + A++  
Sbjct: 76  FSIDSPPPTVSGNLHWGHVYGFTLQDFVARFRRMRGSDVFFPFGYDDNGIASERLAEDEL 135

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                          T+    Q    F +    L IS D     +T       T ++ + 
Sbjct: 136 NVRHQEYERREFQQMTQEVCQQYEAEFTEKMQQLGISIDWNQTYQTISPDVKRTSQLSFI 195

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
            + ++G  Y+      +    E   +  E        +++
Sbjct: 196 DLYEQGREYRKRAPTIWCPECETAISQVETEDDEQPSHFH 235


>gi|15828564|ref|NP_325924.1| leucyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|29337030|sp|Q98RB6|SYL_MYCPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14089506|emb|CAC13266.1| LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA LIGASE) [Mycoplasma pulmonis]
          Length = 807

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 4/188 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K Y+     YP+    H+GH       D++ARF RL G DVL   G D  G    +
Sbjct: 26  KSDKKYYVLDMFPYPSGSGLHVGHPEGYTATDIIARFKRLKGFDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+     L +SY  D  + TT+ + ++  + ++K++  KG 
Sbjct: 86  YAISTGNNPNEFTQKNIATFKKQIKSLGLSYDFDKEVNTTDPKFYEQTQWIFKELYKKGL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++EV    DG   + + + PV   +   +  +++ Y DKLL
Sbjct: 146 AVLADIDVNWCEELGTVLANEEVLIDKDGNKVSERGSFPVVKKKMRQWVLKITNYADKLL 205

Query: 178 SYYESHPE 185
              E    
Sbjct: 206 EGLEDLDW 213



 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 130/344 (37%), Gaps = 43/344 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + +E   +      +   +   +       P+    + + F K 
Sbjct: 417 WIFSRQRYWGEPFPVAFDDENNVYLIDGLVELPFMENIKPSKNGQSPLFNNKKWLYFEKD 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G K    +     W      +  Y+ Y+  +A  +Y             K    P DL++
Sbjct: 477 GKKLTRETNTMPQWA---GSNWYYLAYILKNADGSYEKLDSEEAKKRFKKWL--PVDLYI 531

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++    H +Y   +         +    P  K V     +   G+K+SKS GN+I+P 
Sbjct: 532 GGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFQKVVNQGMILGTDGQKMSKSRGNIINPS 591

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+++E+G D LR + +       D  +  + +K         GI   + R   +    +D
Sbjct: 592 EIVDELGADTLRVYEMFMGPLTDDKDWQVESIK---------GIRKWLERVYRLFEMFFD 642

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
           G        +  D  ILS  +++++EI   ++    + A+++++  V+ + +  +    W
Sbjct: 643 GQ--KTIEKSNEDHLILSQYNKLIKEIENEVELLKFNTAISKLMVFVNLLYK-VEKIPSW 699

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                             E+++  A++L  F P +A ++ + + 
Sbjct: 700 ------------------EILKNFALILSLFAPHIAEELLEKMN 725


>gi|297617013|ref|YP_003702172.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144850|gb|ADI01607.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 926

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 77/462 (16%), Positives = 145/462 (31%), Gaps = 35/462 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
            +  D+ G    +A   AG            + +D+  ++        Y    R  +   
Sbjct: 349 ISPLDDRGVFTEEAGIFAGQFCHDANKSIIAHLKDIGMLVKTGEVTHQYPHCWRCKQPIV 408

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +      +  I                +     +  D +Y     +          W   
Sbjct: 409 YRATEQWFASIDGFRQAALEAIDTVRWIPA---WGRDRIYNMVRDRGDWCISRQRSWGVP 465

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              F+  S  Q  +      H   +      +   +     L     + +    G +   
Sbjct: 466 IPIFYCASCGQAVIDDETIGHVADLFAENGSDIWFASEAKDLLPRGYTCEN--CGSQEFY 523

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
             + IM VW D+ +++                 WPAD+++ G D     F++    +  +
Sbjct: 524 KEKDIMDVWFDSGSSHKAVLETRP------DLRWPADMYLEGSDQHRGWFNSSLSTSVAV 577

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +  +G K+SKSLGNV+DP+ +IE++G D LR ++           
Sbjct: 578 TGRAPYRIVLTHGFVVDEQGRKMSKSLGNVVDPLNIIEKMGADILRLWVSSA-------D 630

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCS 395
           Y  D        + A      +  +   IL +     P           E +  +L    
Sbjct: 631 YRGDVAASENIMNQAAEAYRKIRNTCRFILGNLYDFQPEQDRVKYEDLPELERWVLLKLH 690

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA--STVLYVT 451
           +++Q +    ++   H     V +   V     YFD  K   L  + PD         V 
Sbjct: 691 KLIQRVTRAYEDFEFHVVYHSVHNFCTVDLSAVYFDIIKD-RLYTSAPDSQGRRAAQTVL 749

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
            EVI+ L  +L   +     +I+  L    +    Q  +  L
Sbjct: 750 YEVIQALVRILTPVLAFTTEEIWQYLRGKGDPVSVQLTEWPL 791



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH    ++ D++ ++  + G +  +  G D HG  I + 
Sbjct: 48  QGKPDFILHDGPPYANGHIHVGHTLNKVLKDIIVKYKSMTGYNAPYVPGWDTHGLPIEQQ 107

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
           A  A                 K +  +     R+    L +  D      T E R     
Sbjct: 108 AIKALGLDRHKTDVLEFRRHCKEYAWKYVNIQREEFRRLGVRGDWENPYLTLEPRFEAVQ 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IYKG    ++    E    + E+              PV
Sbjct: 168 IRVFGEMAKKGYIYKGLKPVYWCADCETALAEAEIEYQDKVSPSIYVKFPV 218


>gi|297559883|ref|YP_003678857.1| isoleucyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844331|gb|ADH66351.1| isoleucyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 1066

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 10/260 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+ +      G     + +  + +PA       D     F+++   + L+    
Sbjct: 537 VIDAWFDSGSMPFAQWGAPHQNEETFRENFPAQYISEAIDQTRGWFYSLLAVSTLVFGRN 596

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                V     +   G K+SK LGNV++PI V++  G DALR+F++   +          
Sbjct: 597 SFENVVVLGHILAEDGRKMSKHLGNVMEPIAVMDRHGADALRWFMLASGSPWTARRVGHA 656

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMI------PTPGAFTESDESILSVCSRVL 398
            L++ V   L     + VS                    P P      D  +LS  + V+
Sbjct: 657 ALEEIVRKVLL-TYHSTVSFFTLYANAGEGWDHSLLDSAPAPQDRPLLDRWLLSELNEVV 715

Query: 399 QEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           +++ E M       A  ++ + V +V + Y    +            +       E +  
Sbjct: 716 RDVTEAMDTFDTTAAGRRLTAFVDDVSNWYVRRSRRRFWGGAATPEGAAAFATLFEALET 775

Query: 458 LAILLQAFVPKLANKIFDIL 477
           + +L+   VP L + ++  L
Sbjct: 776 VTLLMAPIVPFLTDHVWSAL 795



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N QP + H       DV  RF  + G  V    G D HG  +  A +         
Sbjct: 57  PPTANGQPGVHHVEARAFKDVFPRFRTMRGYHVDRKAGWDCHGLPVEVAVEKELGLSGKK 116

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +N   F  M + +   ++ DD  RT + ++ ++     K+I
Sbjct: 117 DIESFGIAEFNDRCRESVLRNVDAFTSMTERMGYWVNMDDAYRTMDPQYVESVWWALKQI 176

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG + +      Y  R     +D E+ +G +
Sbjct: 177 WDKGLLVRDYRISPYCPRCGTTLSDHELAQGYE 209


>gi|120610672|ref|YP_970350.1| valyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120589136|gb|ABM32576.1| valyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 963

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 133/421 (31%), Gaps = 99/421 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLS----------AYQDKLLSYYESHPEFILPIERRNEVI 197
                    V+ M  + +F  +S          +   K +    S     +P    N   
Sbjct: 365 PICTRTGQVVEPMLTDQWFVAMSEVGKGDPTGKSIAQKAIDAVASGQVQFVPENWVNT-Y 423

Query: 198 SFVKSGLKDLSLSRKTFDWG--IKIPDDPQY--------------------------IMY 229
           +   + ++D  +SR+   WG  I    D                             ++ 
Sbjct: 424 NQWMNNIQDWCISRQ-LWWGHQIPAWYDEAGKVYVARSEADAQAQAGAGAKLTRDADVLD 482

Query: 230 VWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
            W  +     ++ G+ +     +P      + P+ + V G DI+ F    +   +   + 
Sbjct: 483 TWYSSALVPFSSLGWPEALDDASPTKDYDLYLPSSVLVTGYDIIFFWVARMIMMSTHFTG 542

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------------- 319
            +P             +G+K+SKS GNV+DP+++I+                        
Sbjct: 543 RVPFRHVYMHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALEPLLEKRTTGLRRPETAPQV 602

Query: 320 --------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+      + G+   +D    +     +  N + N  SR 
Sbjct: 603 RKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCNKLWN-ASRF 659

Query: 366 VSMILKDYDGMIPTPGA---------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           V M  + +D  +              F++ D  I+S   +V  E+ +  ++  +      
Sbjct: 660 VLMNCEGHDCGLSDHTQADCDGGYLQFSQPDRWIVSALQKVEAEVAKGFEDYRLDHVAQA 719

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +   V     D Y +  K  +++  +  +        +  +  +  L    +P +  +++
Sbjct: 720 IYEFVWNEFCDWYLEIAKV-QIQTGSEAQQRATRRTLIRTLETILRLAHPLIPFITEELW 778

Query: 475 D 475
            
Sbjct: 779 Q 779



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       + 
Sbjct: 57  ENFAIQLPPPNVTGTLHMGHAFNQTIMDSLARYHRMRGHNTLWVPGTDHAGIATQIVVER 116

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                            T KV+  +       +   R + D +D S + F  T + +   
Sbjct: 117 QLQEQGASRHDLGREAFTRKVWEWKEKSGNTITTQMRRLGDSVDWSREYF--TMDDKLSK 174

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                + ++ ++G IY+G     +    ++  +D EV              P+
Sbjct: 175 VVTDTFVRLYEQGLIYRGKRLVNWDPVLQSAVSDLEVESEEKDGSLWHIAYPL 227


>gi|306832631|ref|ZP_07465770.1| leucine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425239|gb|EFM28366.1| leucine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 837

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 34  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 94  AMDTGNDPAEFTAKNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL  
Sbjct: 154 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLED 210

Query: 180 YESHPEFILPIERRNEVI 197
            E         + +   I
Sbjct: 211 LEDLDWPESIKDMQRNWI 228



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 97/302 (32%), Gaps = 79/302 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D+++ G +    H +Y   +         +   
Sbjct: 503 WYFLRYIDPHNDEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 562

Query: 284 LPLPK---------------------------------KVFSHGFILHKGEKISKSLGNV 310
            P  K                                  + +   +     K+SKSL NV
Sbjct: 563 EPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNV 622

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E  G D LR + +          + ++GL+              + R   ++ 
Sbjct: 623 VNPDDVVEHYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLLT 673

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     E++ ++  V +  ++ + E ++    + A+AQ++  V+  +     
Sbjct: 674 --------TKEIVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAAN----- 720

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  K +         +  +  +    LL  F P L+ +++  L  + E+  + +  
Sbjct: 721 -------KEDK--------LFADYAKGFVQLLAPFAPHLSEELWQTLTQSGESISYVAWP 765

Query: 491 QR 492
             
Sbjct: 766 TW 767


>gi|257870820|ref|ZP_05650473.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804984|gb|EEV33806.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 804

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVPVNWVPELGTVIANEEVIDGKSERGGYD----VIRKPMRQWMLKITAYADRLLDD 204

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 205 LEEVDWPESIKEMQRNWI 222



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 136/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +        +   GD+ +  Y+      +  + +  +     +   +  + 
Sbjct: 341 HDERDHEFAKAFGLEIIPVLAGGDVEEAAYTEDGPHINSEFLDGLDKEAAIEKMNHWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             V   E       + F    Y  + +            +      +   K+     S +
Sbjct: 401 QGVGKKEISYRLRDWLFSRQRYWGEPIPIIHWEDGTTTTLPEDQLPLRLPKTDNIKPSGT 460

Query: 211 RKTFDWGIKIPD---DPQYIMYVWIDALTNYLTTTGYLDN------------PDGSKAKF 255
            ++    +       DP+  M    +  T                        D  K K 
Sbjct: 461 GESPLANVSEWVNVVDPETGMKGRRETNTMPQWAGSSWYFLRFIDPHNKNRLADFDKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +VIE+ G D LR + +          ++++GL+              + R  
Sbjct: 581 RGNVVNPDDVIEQYGADTLRMYEMFMGPLDASIAWNENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M      F   D  +  V ++ ++++ E+ +    + A++Q++  V+E   
Sbjct: 632 RLIVDENGKMRDRITTFN--DGKLSKVYNQTVKKVTEDFEQLHFNTAISQLMVFVNEA-- 687

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                      K++         +  E +     LL    P +  +++ IL 
Sbjct: 688 ----------YKSDA--------LPYEYVAGFVQLLAPIAPHIGEELWAILG 721


>gi|316970809|gb|EFV54681.1| putative valine--tRNA ligase [Trichinella spiralis]
          Length = 1524

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 127/384 (33%), Gaps = 31/384 (8%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
                L+++ Y +  E+              P     E   +   S         +  H 
Sbjct: 405 VMEPMLKEQWYLDCSELATEVKHAVDRLDIFPAGMRNEWINWTSKSEDWCLSRQSWWGHR 464

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-----DDPQYIMYVWIDALTNYL 239
                    N+    V     D + +R                    ++  W  +    L
Sbjct: 465 VPAYYANFENDCHPSVWVVASDETDARNVIADKYPQYTLANLRQDDDVLDTWFSSALVPL 524

Query: 240 TTTGYLDNPDGSKAK--FWPADLHVIGKDILRFHA--IYWPAFLLSANLPLPKKVFSHGF 295
              G+ +       +  ++P  L   G DIL F A  +   +  L   LP  K +     
Sbjct: 525 VLGGWPEKFRSDFTENCYFPLSLLETGHDILGFWAVKMAMLSLQLVGELPFRKLLLHGMV 584

Query: 296 ILHKGEKISKSLGNVIDPIEVIEE------------VGVDALRYFLVREIACGKDGFYDK 343
              + +K+SKS GNVI+P+++I+              G DA+R+ L+R         +DK
Sbjct: 585 CDEQRQKMSKSKGNVINPMQLIQGTPSTETDKGTTAYGADAVRFALLRSNVKADTVAFDK 644

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             L +       N +         M   D           +  D+ ILS  S V++ + E
Sbjct: 645 TMLTRS--RHFCNKLWQSFKFLKKMWNNDAQHEYT-----SVVDKWILSRLSTVVKNVNE 697

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
           + +    HR    ++        D Y +  K +      P  A  ++ +   V      L
Sbjct: 698 SFETYDFHRCTNDLLDFWWFEFCDVYLEWSKHYFYPGRCPT-AENIVSIFATVTDTYLRL 756

Query: 462 LQAFVPKLANKIFDILFVADENRC 485
           L  F+P LA +++ +L + ++   
Sbjct: 757 LAPFMPFLAEELYSMLPLENKAIS 780



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 12/98 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R                H+GHA  + I D +AR HR+ G  VL+  G D  G      
Sbjct: 55  SRRRPYIFCLPPPNITGDLHLGHALTVAIEDAIARKHRMCGDAVLWIPGFDHAGLATQLV 114

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
            +N         ++N    ++M      S +DF+R  +
Sbjct: 115 VENMLF------NKNGILRKEM------SREDFVRACD 140


>gi|219124456|ref|XP_002182519.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405865|gb|EEC45806.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 899

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 86/231 (37%), Gaps = 16/231 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH      +DV++R+ R+ G DVL   G D  G    + 
Sbjct: 102 SKPKKYVLDMFPYPSGAGLHVGHPEGYTASDVMSRYWRMKGYDVLHPIGWDSFGLPAEQF 161

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF+     L  SY  D  I TT++ +    + ++ ++  KG  
Sbjct: 162 AIQTGTKPASTTKKNIANFKRQLKSLGFSYDWDREIATTDRGYVQWTQWIFLQLFRKGLA 221

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +   S  +         ++EV  G          +PV+ +    +  R++ Y D+L + 
Sbjct: 222 EQSEVSVNWCPALGTVLANEEVING----LSERGDHPVERVPLRQWVLRITDYADRLEAG 277

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            E        +  + + I                 D+G+    D    ++ 
Sbjct: 278 LEGLEWPAGTMTAQKQWIGKSIG---------CNIDFGVDQWPDETISVFT 319



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 128/409 (31%), Gaps = 51/409 (12%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ--YYNAQHN 155
           T            ++++  G         W   R   +     +Y   D          N
Sbjct: 463 TTDEAKKAVTSKLEELNKGGPRITYKLRDWVFSRQRYWGEPIPIYFPVDFPDGIDPTTQN 522

Query: 156 PVQWMEEEGYFFRLS-AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           P     E    F       +  L       +   P +     ++  K        ++   
Sbjct: 523 PADDNCEYTIRFDQPIPVAEADLPLELPEMDDFQPGDDPAGCLARAKDW---RFFAKDGK 579

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
            +  +    PQ+    W          +    +    +    P DL+V G +    H +Y
Sbjct: 580 WFSRETNTMPQWAGSCWYYFRFMDPKNSKEAFSKVVDEEWM-PVDLYVGGAEHAVLHLLY 638

Query: 275 WPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              +              P  K V     +   GEK+SKS GNV++P +++ E G DALR
Sbjct: 639 ARFWHQVLFDLGYTKHPEPFQKLVHQGMILGSDGEKMSKSRGNVVNPDDIVGEQGADALR 698

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            + +          +    +   V           V  +VS  + +           T+ 
Sbjct: 699 LYEMFMGPLEAVKPWQTSQVAGVVR------FQRKVYDTVSTAVAN---------GKTKM 743

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           D+    +  + ++++ +++++   + A++ ++ L + +                      
Sbjct: 744 DQETARLLHKTMKKVTQDIESMAFNTAISALMVLTNHL-----------------QSLKA 786

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
              V VE   +LA+++  F P L  + + +L        + +   D+ L
Sbjct: 787 --NVPVEAAEKLALMVSPFAPHLGEECWSMLGHEGSLAYQDWVEFDETL 833


>gi|157692223|ref|YP_001486685.1| isoleucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680981|gb|ABV62125.1| isoleucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 921

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 81/457 (17%), Positives = 151/457 (33%), Gaps = 38/457 (8%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN-----FRDMADVLDISYDDFIR 96
           GLDV      DE G    +A    G+  +      +            D +  SY    R
Sbjct: 341 GLDV--LCPVDEKGVMTEEAPGFEGLFYEDANKAITEQLEAKGALKKLDFITHSYPHDWR 398

Query: 97  TTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           T +   +      +   K   +             +  +   +N                
Sbjct: 399 TKKPTIYRATAQWFASIKDFREALLDNIKETKWVPAWGETRLFNMVRDRGDWCISRQRVW 458

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             P+         F     +  +      H   +      N         L     +   
Sbjct: 459 GVPI-------PVFYAENGEPIITDETIQHVSQLFREHGSNIWFEKEAKELLPEGFTHPG 511

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G       Q IM VW D+ +++                  PADL++ G D     F+
Sbjct: 512 SPNG--EFTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRGWFN 563

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    A  ++   P    +     +  +G K+SKSLGN IDP +V +++G + LR ++  
Sbjct: 564 SSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTIDPTKVAKQLGAEILRLWV-S 622

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDES 389
            +    D     D LK+   A++   I N   R +   L D+D  +         E D+ 
Sbjct: 623 SVNYQADHPVSDDILKQV--AEVYRKIRNTF-RFLHGNLFDFDPAVNAVPVEELREVDQY 679

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPDRAS 445
           IL   +++++++++   +         + +   +     Y D  K     +   +PDR  
Sbjct: 680 ILIKLNKLIEKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAKDVVYIEHADHPDR-R 738

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++  V  E +  L  L    +P  A++++  L   +E
Sbjct: 739 SMQTVFYETLMALVKLTAPILPHTADELWSHLSFVEE 775



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D + RF  ++G    +  G D HG  I  A
Sbjct: 45  KGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     R+    L +   +D+   T +  +    
Sbjct: 105 LTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 ILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|312870174|ref|ZP_07730307.1| leucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094294|gb|EFQ52605.1| leucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 806

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKFYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPKSFTNKNIDHFRDQIQSLGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV     + +  +++AY D+L
Sbjct: 148 AYESEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMKQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IKDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 104/263 (39%), Gaps = 45/263 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFL------- 279
            A +++        +     A      +W P DL+V G +    H +Y   +        
Sbjct: 495 WAGSSWYWLRYTDPHNSKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLG 554

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      + 
Sbjct: 555 LVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDKYGADTLRLYEMFMGPLTES 614

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D++GL         +G    + R   +++ D + +      F   D  +  V ++ +
Sbjct: 615 VPWDEEGL---------HGSYKWIQRVWRLLMDDNNHLRDRVSNFN--DGKLTKVYNQTV 663

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E+ +    + A++Q++  V+E  +                       +  E ++  
Sbjct: 664 KKVTEDFERMHFNTAISQLMVFVNEAYK--------------------ADDLPAEYMQGF 703

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++   +P +A +++    ++D
Sbjct: 704 IKMISPVMPHVAEELWSQFGISD 726


>gi|157736834|ref|YP_001489517.1| valyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698688|gb|ABV66848.1| valyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 871

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 145/416 (34%), Gaps = 56/416 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +DE +    E +    G  Y    N V+    + +F R       +   Y    +F  P 
Sbjct: 327 QDEGFIIKIEEHVHQVGHCYR-CKNIVEPYISKQWFVRKEVAAKSIEKTYAGEAKFH-PS 384

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY-------------------- 226
              N         L+D  +SR+   WG +I     DD  +                    
Sbjct: 385 HWLN-SYRAWMDELRDWCISRQ-LWWGHRIPVFYCDDCGHQWADKADVPHSCPKCASKNF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDG-------SKAKFWPADLHVIGKDILRFH--A 272
                ++  W  +     +  G+ +N              F+P  L + G DI+ F    
Sbjct: 443 TQDPDVLDTWFSSALWAFSPLGWGNNGQMNGTFNESDLKDFYPNSLLITGFDIMFFWVAR 502

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +          LP  K ++ H  +  + G K+SKS GNVIDP++++EE   D +R+ L  
Sbjct: 503 MMMMGEHFRGELPF-KDIYMHALVRDEHGAKMSKSKGNVIDPLDMVEEHSADIIRFTLAY 561

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               G+D       L++    +  N + N  S  +++ +  +  +       +     + 
Sbjct: 562 LAVQGRDIKLGAKNLEQ--FRNFTNKLYN-ASNFLALNVDTFPDL-KDIEIKSPLGLYMQ 617

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           S  S  + E+R  +++   + A + +   V            W ++ +   + S V    
Sbjct: 618 SRLSDAIDEVRGALESYKFNEAASVLYRFVW------TEFCDWGIEYSKASKDSIVE--L 669

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + ++   ++  F+P +++ ++  L           +           +  + +F
Sbjct: 670 GAIFKETLKMVSPFMPFISDFLYHKLSGTSLEEGESLMIMNFPKNVKKDEKIEEMF 725



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 22/174 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 34  EEGKNFAIMMPPPNVTGSLHIGHALTFTLQDIITRYKRMDGFKTLWQPGTDHAGIATQNV 93

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K F         R +      S + F  T ++ 
Sbjct: 94  VEKQLLAEGTTKEELGREKFLERVWKWKEFSGGTIVHQMRKLGVSPAWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             +  +  +  + ++G I +  Y   +   D A  + +  +    G++Y+  ++
Sbjct: 152 LKEAVKEAFVHLYNEGMIVQNNYMVNWCTHDGALSDIEVEHDEVQGKFYHMNYH 205


>gi|328956891|ref|YP_004374277.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673215|gb|AEB29261.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 816

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E  Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 40  EKENFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGFNVLHPMGWDAFGLPAEQY 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 100 ALDTGNDPAEFTAHNIETFRRQINSLGFSYDWEREINTTDPDYYKWTQWIFTKLYEKGLA 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +         ++EV  G          +PV     + +  +++ Y D+LL  
Sbjct: 160 YEAEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVYRKPMKQWMLKITVYADRLLDD 215

Query: 180 Y 180
            
Sbjct: 216 L 216



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 103/268 (38%), Gaps = 41/268 (15%)

Query: 250 GSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG 300
             K K W P D+++ G +    H +Y   +         +    P  K       +    
Sbjct: 526 PEKLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGNN 585

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV++P +V+E+ G D LR + +          + ++GL+             
Sbjct: 586 EKMSKSKGNVVNPDDVVEKFGADTLRMYEMFMGPLDASIAWSENGLEGS---------RK 636

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R   +I+ +   +      F   D S+  V  + ++++ E+ ++   + A++Q++  
Sbjct: 637 FLDRVWRLIMDENGKVRDRITKFN--DGSLDVVYHQTVKKVTEDFEHLRFNTAISQMMVF 694

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E  +                       + V+ I+    LL    P +  +++  L  +
Sbjct: 695 VNEAYK--------------------ATALPVDYIKAFVQLLAPIAPHMGEELWANLTHS 734

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFP 508
            E+  + +        F++    + +F 
Sbjct: 735 GESISYVTWPT-FDEKFLVEDEIEVVFQ 761


>gi|229163736|ref|ZP_04291681.1| Leucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619703|gb|EEK76584.1| Leucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 802

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT   ++   + ++ ++ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTNPNYYKWTQWIFLQLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDITKEAYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|222153825|ref|YP_002563002.1| leucyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782864|sp|B9DW16|SYL_STRU0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222114638|emb|CAR43674.1| leucyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 833

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    +
Sbjct: 29  SSKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPADFTAENIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 206 DLEEVDWPESIKDMQRNWI 224



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 104/316 (32%), Gaps = 85/316 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D    K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPKNDKAIADPDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKREGSYFHIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I    +      GA          V    ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLITTK-EMTGDNSGALD-------KVYHETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  +     +L K                 +    L+  F P L  +++ +L 
Sbjct: 710 IFVNAANK--ED----KLYKEQA--------------KGFVQLIAPFAPHLGEELWQVLT 749

Query: 479 VADENRC---FQSLDQ 491
            ++++     + + D+
Sbjct: 750 DSNQSISHVAWPTWDE 765


>gi|125809585|ref|XP_001361180.1| GA17927 [Drosophila pseudoobscura pseudoobscura]
 gi|54636354|gb|EAL25757.1| GA17927 [Drosophila pseudoobscura pseudoobscura]
          Length = 1048

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/457 (15%), Positives = 131/457 (28%), Gaps = 97/457 (21%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G     C               + +         +   + V+ + +  ++   S     
Sbjct: 420 TGMKRFQCRKQILERLKTLNLYRETINNPMVVPICSRSKDVVEPLIKPQWYVSCSDMAAS 479

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI------PDDP----- 224
                 S    I+P             G++D  +SR+   WG +I        DP     
Sbjct: 480 ATEAVRSGELKIIPEHHTKTWY-HWMDGIRDWCVSRQ-LWWGHRIPAYHVSFSDPSIQTG 537

Query: 225 -------------------------------------QYIMYVWIDALTNYLTTTGYLDN 247
                                                + ++  W  +     +  G+ DN
Sbjct: 538 TSDDEQYWIVARSEAEALSKAADRFKVDASKIVLKQDEDVLDTWFSSGIFPFSVFGWPDN 597

Query: 248 PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                  F+P  L   G DIL F    + +    L   LP  +           G K+SK
Sbjct: 598 TK-DLQTFYPTSLLETGHDILFFWVARMVFFGQKLLGKLPFKEVYLHPMVRDAHGRKMSK 656

Query: 306 SLGNVIDPIEVI-------------------------------------EEVGVDALRYF 328
           SLGNVIDP++VI                                      E G DALR+ 
Sbjct: 657 SLGNVIDPMDVILGITLEGLHAQLVGSNLDPREIEKAKAGQKQDYPQGIPECGSDALRFA 716

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTES 386
           L   I   +D   D + +         N + N    ++     +  +   +    A  + 
Sbjct: 717 LCAYITQARDINLDINRVLG--YRFFCNKLWNATKFALLYFTGNEKFSTDLSASDAVNQM 774

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA 444
           D  ILS  +  ++      ++     A +   +       D Y +  KP   +  +  + 
Sbjct: 775 DAWILSRLAAAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKP-IFQGGSEQQQ 833

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +         +     LL  F+P +  +++  L  A+
Sbjct: 834 TEARRTLYVCLDFGLRLLSPFMPFITEELYQRLPRAN 870



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 129 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 188

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      D    L  SYD      T + +     
Sbjct: 189 LWRDEQLSRHDLGRDKFIERIWDWRREKGGRIYDQLKSLGSSYDWSRVNFTMDPKLCRAV 248

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 249 TEAFVRLHEEGSIYRSSRLVNWSC 272


>gi|223933830|ref|ZP_03625798.1| leucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897513|gb|EEF63906.1| leucyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 833

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 6/197 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         ++EV      +       PV       +  +++AY ++LL+  
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLNDL 207

Query: 181 ESHPEFILPIERRNEVI 197
           E         + +   I
Sbjct: 208 EEVDWPESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 107/313 (34%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +  +    + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEELLNAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHIETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T    +E+  ++  V +  ++ + E++++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEISSENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D+        V+  +    L+  F P LA +++  L 
Sbjct: 710 IFVNAANK--------------EDKLY------VDYAKGFVQLIAPFAPHLAEELWQGLA 749

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 750 ATGQSISYVAWPT 762


>gi|330833694|ref|YP_004402519.1| leucyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307917|gb|AEB82333.1| leucyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 833

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 6/197 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +   Y      YP+    H+GH       D+L+R+ R  G +VL   G D  G    + A
Sbjct: 31  KPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYA 90

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y
Sbjct: 91  MDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         ++EV      +       PV       +  +++AY ++LL+  
Sbjct: 151 EAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLNDL 207

Query: 181 ESHPEFILPIERRNEVI 197
           E         + +   I
Sbjct: 208 EEVDWPESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 103/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +       + P D+++ G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  + +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         T     E+  ++  V +  ++ + E++++   + A+AQ++
Sbjct: 659 -KFLDRVYRLLT--------TKELAAENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D+        VE  +    L+  F P LA +++  L 
Sbjct: 710 IFVNAANK--------------EDKLY------VEYAKGFVQLIAPFAPHLAEELWQGLT 749

Query: 479 VADENRCFQSLDQ 491
              ++  + +   
Sbjct: 750 NTGQSISYVAWPT 762


>gi|260810764|ref|XP_002600118.1| hypothetical protein BRAFLDRAFT_66627 [Branchiostoma floridae]
 gi|229285404|gb|EEN56130.1| hypothetical protein BRAFLDRAFT_66627 [Branchiostoma floridae]
          Length = 1057

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 60/386 (15%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +    +  +Y    N   W      +     +  ++ +Y+ +  +  +P     +   +V
Sbjct: 495 IPDFHEATWYRWMENCRDWCISRQLW-----WGHRIPAYFVTVDDPSVPAGADVDEKYWV 549

Query: 201 KSGLKDLSLSRKTFDWG-----IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
               +  +  +    +G     I +  D   ++  W  +     +  G+ +  +     F
Sbjct: 550 SGRDESEARRKAAERFGVAEDKISLRQDED-VLDTWFSSAFFPFSIFGWPEQTE-EFKLF 607

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +P  L   G DIL F    +      +   LP  K+VF H  +    G K+SKSLGNV+D
Sbjct: 608 YPGTLLETGHDILFFWVARMVMMGLKMIGKLPF-KEVFLHALVRDAHGRKMSKSLGNVVD 666

Query: 313 PIEVI-------------------------------------EEVGVDALRYFLVREIAC 335
           P++VI                                      E G DALR+ L    + 
Sbjct: 667 PVDVINGITLENLHKLLENSNLDPKEVARAKQGQKEDYPNGIPECGTDALRFALCAYTSQ 726

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSV 393
           G+D   + D L+ +      N + N    +++ + + +         G     D+ ILS 
Sbjct: 727 GRDI--NLDVLRVQGYRFFCNKMWNATKFALTSLGEGFQPRFEAKLSGNERLIDQWILSR 784

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               +       ++         + +       D+Y ++ KP    K    +  T     
Sbjct: 785 LVAAVDAANRGFESYDFPLVTNGIYNFWLYDLCDKYLESIKPIIYGKDEAAK-ETTRQTL 843

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +     LL  F+P +  +++  L
Sbjct: 844 YTCLEVGLRLLSPFMPFITEELWQRL 869



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 19/157 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + +  +           H+GHA    I D + R+HR+ G   L+  G D  G       +
Sbjct: 129 KGQFVMVIPPPNVTGSLHLGHALTNAIEDSITRWHRMKGKTTLWNPGCDHAGIATQVIVE 188

Query: 64  N---------------AGVTTKVFVDQNSR--NFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                KV+  +N +     +   ++ IS  +D    T +++  +
Sbjct: 189 KKLQREEGLSRHDIGREKFVEKVWKWKNEKGGRIYEQQRLMGISVDWDRAAFTMDEKLCN 248

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++ D+G IY+      +S + ++  +D EV
Sbjct: 249 CVKEVFIRLHDEGIIYRSNRLVNWSCQLKSAISDIEV 285


>gi|110667028|ref|YP_656839.1| valyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109624775|emb|CAJ51181.1| valine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 930

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 77/452 (17%), Positives = 148/452 (32%), Gaps = 28/452 (6%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE G     A   +G+       +   +        D   D    T 
Sbjct: 326 WYQAHDLDLRIAIDESGTMTDVAGSYSGLD----STEARESIVADLSESDALLDRREITH 381

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C    + +     +    Y       DE      E+    +  +   + N ++
Sbjct: 382 TVNVHERCGTNIEFL-----VKDQWYVKLLDKTDEYLTAGREMEWYPEKMFTRYK-NWIE 435

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            ++ +    R  +       +Y    E ++  E+ +  +  +       S      D  I
Sbjct: 436 GLQWDWAISRQRSSGIPFPVWYCDACEHVVIAEKESLPVDPLSDNPPVESCPACNHDTFI 495

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS-----KAKFWPADLHVIGKDILRFHAI 273
                   +   W  +    L   G+  N +        +  +P +L   G DI+ F   
Sbjct: 496 P----EDDVFDTWATSSLTPLINAGWDWNDNTETIEFGDSGLYPFNLRPQGHDIISFWLF 551

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    EK+SKS GNVI P EVI E  VDA RY+   
Sbjct: 552 HTVVKCYEHTGEVPFDSVMINGMVLDENREKMSKSKGNVIAPDEVITEYPVDAARYW-AA 610

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  Y + G+  R    L   + N       +     D    +       D  +L
Sbjct: 611 GSAVGDDLPYSEKGI--RAGEKLLRKLWNASKLVEDLTTDAPDPETMSHADLEAIDRWLL 668

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           +     +  + E  +++   +A   + S+      D Y +  K    + T  D A+   Y
Sbjct: 669 ARIDTEIDRLTEKFESREFSKARDGLRSVFWHTFCDDYLEIAKHRIREGTTGDAAAA--Y 726

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 R+   L    +   + +++  ++V++
Sbjct: 727 TLTVAHRRFLKLFAPILAHASEELWHDMYVSN 758



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I +     +   H GH Y   + D +ARF R+ G DV F  G D++G    + A++  
Sbjct: 74  FSIDSPPPTVSGNLHWGHVYGFTLQDFVARFKRMRGSDVFFPFGYDDNGIASERLAEDEL 133

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                          T+    Q    F +    L IS D     +T       T ++ + 
Sbjct: 134 NVRHQEYERREFQQMTQEVCQQYEAEFTEKMQQLGISIDWNQTYQTISSDVKRTSQLSFI 193

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
            + ++G  Y+      +    E   +  E        +++
Sbjct: 194 DLYEQGREYRKRAPTIWCPECETAISQVETEDDEQPSHFH 233


>gi|229013948|ref|ZP_04171073.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747321|gb|EEL97199.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 802

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELNWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDISKEAYTGDGAHVNSAFLDGLNKEEAIVKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQENGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L  ++     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYSETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|298241842|ref|ZP_06965649.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297554896|gb|EFH88760.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 818

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 135/391 (34%), Gaps = 53/391 (13%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +   +     PV+++    +F R+   +++ L           P   +     +V++  
Sbjct: 341 HNVGVHERCGTPVEYLHTRQWFIRVLDQKERFLKA--GRQIRWTPAFMQARYEHWVENLQ 398

Query: 205 KDLSLSRKTF-------------------------------------DWGIKIPDDPQYI 227
            D  +SR+ F                                       G    +  + +
Sbjct: 399 WDWCISRQRFLGVPIPAWTCRACGQLLLASREQLPIDPRITAPGHPCSCGSTEFEPERDV 458

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLP 285
           M  W  +  + L    ++D+P+   A+ +PA L     DI+R  A Y    A   +  LP
Sbjct: 459 MDTWATSSCSPLIIANWVDDPER-FARHFPASLRPQAHDIIRTWAFYTIVKALYHAGELP 517

Query: 286 LPKKVFSHGFILHKGEKISKSLGN--VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
             + + S   +  +  KISKS GN     P+E++E    DALRY+    I  G D  +  
Sbjct: 518 WREVLVSGHALSAERSKISKSKGNSHTGGPLELVERESADALRYW-ATSIKPGLDTPFHP 576

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCSRVLQE 400
           + +       L   + N    +   + +   +     P P     +D  +L+  ++ ++ 
Sbjct: 577 ELIAN--GRRLVTKLWNAARFAARHLQELSPEEIASTPEPNGLLPTDRWLLARLAQTIEH 634

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
               +       A A+V         D Y +  K   L     ++     +   + +  +
Sbjct: 635 ATRELIENDYAAARAEVERFFWSDLCDNYLELVKA-RLYNDMGEQTQAARWTLYQALLSV 693

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LL  ++P +  +I+  LF   E      L
Sbjct: 694 IKLLAPYMPFITEEIYQGLFQEREGASSLHL 724



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 15/150 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I T     + + HIGH Y    ADV+ARFHR+ G  VL+  G D++G    +  +   
Sbjct: 37  YTIDTPPPTVSGELHIGHCYSYTQADVIARFHRMLGERVLYPMGFDDNGLPTERYVEKTI 96

Query: 67  V-------------TTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWK 111
                              + Q    F  +   L +S D   R  T   +   T +  + 
Sbjct: 97  KRKALEMELPEFLEQCHTLIRQTEERFETLWRRLSLSIDWRYRYSTISPQAQRTSQWSFI 156

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++     +Y       +    +      EV
Sbjct: 157 QLYQAKRVYALPAPTLWCPECQTAIAQAEV 186


>gi|269958908|ref|YP_003328697.1| leucyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848739|gb|ACZ49383.1| leucyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 829

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA + GV
Sbjct: 34  YVLGMFPYPSGNIHMGHIRNYAIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYGV 93

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              V+ ++N  + R     + ISY  D  I T ++ ++   +  +      G  Y+    
Sbjct: 94  NPAVWTERNIESMRKQLKSIGISYNWDREIATCKEDYYKHEQAFFLDFLQHGLAYRKESW 153

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V  G            ++  +   +F +++ + D LL   ++   
Sbjct: 154 VNWDPVDNTVLANEQVVDG----RGWRSGAKIERRKLSQWFLKITDFADSLLDGLKTLDG 209

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 210 WPEKVKLMQERWIGKTEG 227



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 142/442 (32%), Gaps = 74/442 (16%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHNPVQW 159
           D  ++++     + D+ K  YSG  + R+  + N   V    +              V  
Sbjct: 346 DIYQVVFPDDGVQYDLQKEAYSGDGTYRNSEFLNGLRVDAARNAMIQKLESMGGCRRVTN 405

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
                +      Y    +         I+P++R++  IS  +        +       W 
Sbjct: 406 YRLHDWGISRQRYWGCPIPVVHCEKCGIVPVDRQDLPISLPEEVDFSRGGNPLDHHPTWK 465

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILR 269
                  Q       D    +  ++ Y       +         K  P D ++ G +   
Sbjct: 466 HVQCPKCQSSAQRETDTFDTFFESSWYFAAFCSEQGGINAADCNKLLPVDYYIGGVEHAV 525

Query: 270 FHAIYWP--------AFLLSANLPLPKKVFSHGFI------------------------- 296
            H +Y             L+   P    +                               
Sbjct: 526 LHLLYARFFCRALKKCGHLAVEEPFRNLITQGMVCHSVYRDAAGNYLFPEDAQRMIRDGE 585

Query: 297 ---LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                K EK+SKS  NV+DP  +I++ G D +R F++ +    +D  +   G++      
Sbjct: 586 AVQRGKVEKMSKSKKNVVDPSHIIKKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWR-- 643

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               +  L   + S I  D+D            D   LS   ++L+ +  +M++  ++ A
Sbjct: 644 YLERLWRLFEDNSS-IGADFDT-----ADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 697

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+   + + V   F+  K                 V  E +  L  +++ F+P +A K+
Sbjct: 698 VAKFREMSNTV---FEMVK-----------CGVSQQVINESVCILLRVMEPFIPHIAEKL 743

Query: 474 FDILFVADE--NRCFQSLDQRL 493
           ++ +       NR + S  + L
Sbjct: 744 WERIGGEGMLCNRQWPSAREDL 765


>gi|167763023|ref|ZP_02435150.1| hypothetical protein BACSTE_01388 [Bacteroides stercoris ATCC
           43183]
 gi|167699363|gb|EDS15942.1| hypothetical protein BACSTE_01388 [Bacteroides stercoris ATCC
           43183]
          Length = 1162

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 107/301 (35%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+ +       Y  
Sbjct: 592 FQPGVYTQENYDKIDLHRPYVDDIVLVSKAGKPMKRESD-LIDVWFDSGSMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  I+SV + +++++          +A   +   
Sbjct: 771 FFALYANVDGFEYKEADVPMAERPEIDRWIISVLNTLVKDVDNCYNEYEPTKAGRLISDF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 61/209 (29%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D+       
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMQNPYI-- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|163787628|ref|ZP_02182075.1| hypothetical protein FBALC1_03777 [Flavobacteriales bacterium
           ALC-1]
 gi|159877516|gb|EDP71573.1| hypothetical protein FBALC1_03777 [Flavobacteriales bacterium
           ALC-1]
          Length = 877

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 18/261 (6%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLL 280
              ++  W  A    +     + NP+  +   ++P +  V G DIL F    +    +  
Sbjct: 454 ESDVVDTWFSAWLWPMNVFDGIRNPENEEIEYYYPTNDLVTGPDILFFWVARMIIAGYEY 513

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P      +      +  K+SKSLGN  D +++IE+ G   +R  L+   A G D  
Sbjct: 514 KDERPFENVYLTGLVRDKQRRKMSKSLGNSPDALKLIEDYGAGGVRVGLLLSSAAGNDLM 573

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D++   +      AN I N +    S    + D  I  P +   S     +   + + E
Sbjct: 574 FDEELCDQ--GKKFANKIWNALRLVKSW---EVDESISQPQSSKISINWFEAKFQKDITE 628

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIR 456
           I ++     +  AL     LV       D    W L+   P     +   T+E    +  
Sbjct: 629 IEDHFSKYRLSDALMTTYKLVW------DDFCGWLLEMVKPAYQQPIDAKTLESVNTIFE 682

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  +L  F+P L  +I+  +
Sbjct: 683 DLLKILHPFMPFLTEEIWHYI 703



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLLGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  +D    T +    +
Sbjct: 92  VAKLKAQGIDKNDLSREEFLKHAWDWTEEYGGVILEQLKKLGCSCDWDRTKFTMDDDMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 AVIKVFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIH 190


>gi|78184679|ref|YP_377114.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729939|sp|Q3AXV7|SYL_SYNS9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78168973|gb|ABB26070.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 884

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 5/204 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +   +  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     A
Sbjct: 57  SSKPGFFALSMFPYPSGSLHMGHVRNYVITDVIARVQRMRGDSVLHPMGWDAFGLPAENA 116

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +    + D+N    R+  D L   I +D    T    ++   + L+ ++ + G  
Sbjct: 117 AIERNIDPGEWTDRNIDQMRNQLDRLGLSIDWDREQATCHSDYYRWTQWLFLELLEGGLA 176

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +   D+    +++V   ADG+ + +    V+  +   +F R++ Y + LL+ 
Sbjct: 177 YRKNATVNWDPVDQTVLANEQV--DADGRSWRSGA-LVEQRQLNQWFLRITDYAEALLND 233

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
            +    +   +            G
Sbjct: 234 LDKLKGWPERVRTMQANWIGRSEG 257



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 21/194 (10%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++ +        + 
Sbjct: 641 FEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFR--FLQRLW 698

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQVI 418
            LV  + S +        P      E+D  +       +  + +++     ++ A+++++
Sbjct: 699 RLVENASSTLTDLNSTGCPADLTDQEAD--VRRALHLAIDAVSDDLNGEIQLNTAISELM 756

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L +             +  + PDR      +  E +  L  LL  F P +A + +  L 
Sbjct: 757 KLSN------------TITSSGPDRLR--PPILQEALSGLIRLLAPFAPHIAEEFWSRLG 802

Query: 479 VADE--NRCFQSLD 490
                  + + S+D
Sbjct: 803 GDGSVHQQSWPSVD 816


>gi|53725445|ref|YP_102654.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642677|ref|ZP_00441430.1| valine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121598960|ref|YP_992791.1| valyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385477|ref|YP_001026421.1| valyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449698|ref|YP_001080307.1| valyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167001552|ref|ZP_02267347.1| valine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254177748|ref|ZP_04884403.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254199591|ref|ZP_04905957.1| valyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254358691|ref|ZP_04974964.1| valyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81824041|sp|Q62KW5|SYV_BURMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52428868|gb|AAU49461.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227770|gb|ABM50288.1| valyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293497|gb|ABN02766.1| valine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242568|gb|ABO05661.1| valine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147749187|gb|EDK56261.1| valyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|148027818|gb|EDK85839.1| valyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698787|gb|EDP88757.1| valyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238523864|gb|EEP87300.1| valine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062657|gb|EES44843.1| valine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 955

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 118/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   ++     + +      G    
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARNEEDARAQAAAKGYTGALKR 462

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
           DD   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 463 DDD--VLDTWFSSALVPFSSLGWPNETP-EMKHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFGTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPRQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D     P               F+ +D  I+S+  RV  +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGFDKPEVCGAGDCGPGGYLDFSPADRWIVSLMQRVEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K      T+  + +T     + V+  +  L    +P
Sbjct: 697 FDNIANAIYKFVWDEYCDWYLELAKVQIQNGTSEQQRAT-RRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            +  R ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SEAVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|37528097|ref|NP_931442.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787534|emb|CAE16637.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 497

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 88/525 (16%), Positives = 187/525 (35%), Gaps = 65/525 (12%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   H+GH A   + AD+  R  RL G      + +D++   + + A+ 
Sbjct: 3   KYIVTITPPTPNGDLHVGHIAGPFLSADIFTRTQRLKGKKCYLISYSDDYQSYLQRKAEE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD-TCRILWKKISDKGDIYKGC 123
            G++      +NS+  ++   ++DI  D ++ + + R+ +   ++L+    D+G I    
Sbjct: 63  IGISAPALAKENSKKIQESLILIDIKLDHWLESYDNRYFEDAVKMLYHSCLDQGIIAPKV 122

Query: 124 YSGWYSLRDEA-----YYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
               Y  + E      +   +  + G                            +  V +
Sbjct: 123 SLEPYCEKCEKWGYEAFARGECNHCGESSDPSQCESCAMAPDAFEMKNLRCILCNENVVY 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E  F  L    +KL     S P          EV +    G+K+  ++R   + G+K
Sbjct: 183 KHVERNFLLLPVIAEKLKEKILSSPMRPQLTAWVEEVFAH---GIKEWGVTRPN-ESGLK 238

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-------PADLHVIGKDILRFHA 272
           +  D  + ++ W   L  YL T   L   +      +          ++ +G D    H 
Sbjct: 239 LYSDENHRIHTWFMGLAGYLATLKELSEKNADTESPYDLIYDDNTCMVNFLGMDCSYSHI 298

Query: 273 IYWPAFLLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + +PA +L  + L      +++ F+   G+  S S  + I   ++++    D++R+++  
Sbjct: 299 LAYPAQILLNDELHFKHAFYTNFFLKLDGKDFSTSRNHAIWVKDIVKNACSDSVRFYVSL 358

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    +  +      N      +  +      M   +    I +P   +ES+  I+
Sbjct: 359 ISPEHASENFVVEEFWTWRNHIFNYLLPKISDNLEKMNSDN----ITSPIVLSESETKII 414

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
                  +       N  I    A+++ ++  ++   +      L K             
Sbjct: 415 ERWQTYSR-----YDNFSIKEIAAELMEMLDLLNAKLNYN---ILDK------------- 453

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
             +    AIL +  +PK + K+ + +    +   F SL    +PG
Sbjct: 454 -NLAILFAILSEPIIPKTSQKLKEYI-THHDIEAFCSLLNLSRPG 496


>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 930

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 129/355 (36%), Gaps = 17/355 (4%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +D +Y   +G+          W      F+     ++ +     +H + +      + 
Sbjct: 435 WGEDRIYNMVEGRGDWCISRQRTWGVPIPIFYCNECGKEIITEETIAHIQELFKEHGSDI 494

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             +   + L    L+      G K       IM VW D+ +++L      +         
Sbjct: 495 WFAKEANELVPPGLTCHHCGKG-KDFRKETDIMDVWFDSGSSHLAVLDQKELWP---DLH 550

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           WPADL++ G D     F++    +  +++  P    +     +  KG K+SKSLGNV+DP
Sbjct: 551 WPADLYLEGSDQHRGWFNSSLSTSVAVTSKPPYKAVLTHGFVVDEKGRKMSKSLGNVVDP 610

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++VI ++G D LR ++        D    ++ LK+   +     I N   R +   L D+
Sbjct: 611 LKVINQMGADILRLWV-SSADYRGDLSVSQNILKQMTES--YRKIRNTA-RFLLGNLYDF 666

Query: 374 DGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFD 429
           D            E D   L    ++++ +    +N   H     + +         Y D
Sbjct: 667 DPAKDKVDYADLPELDRVALMELHKLIKRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLD 726

Query: 430 AQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             K   L    P          V  EV+  L  LL   +     +I+  + V  E
Sbjct: 727 IIKD-RLYTAPPASRERRAAQTVLYEVLDALVRLLVPVLAFTTEEIYQHMPVVGE 780



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
           + + K  +     Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  QGKPKYILHDGPPYANGHIHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGWDTHGLPIEQQ 104

Query: 61  ------------AAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                       +        K +    ++   +    L +   +D    T   ++  T 
Sbjct: 105 AIKSLGINRHQVSPVEFRHKCKEYALNFAKIQSEEFQRLGVRGDWDHPYYTLIPQYEATQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IYKG    ++    E    + EV              PV
Sbjct: 165 IRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEYADKTSPSIYVKFPV 215


>gi|300690846|ref|YP_003751841.1| valine--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077906|emb|CBJ50545.1| Valine--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 968

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 128/395 (32%), Gaps = 88/395 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L   +S    ++P +  N   +   + ++D  +SR+   WG  I 
Sbjct: 389 PEGTRFPGRSIAEVALDAVQSGKIKLVPEQWVNT-YNQWLNNIQDWCISRQ-LWWGHQIP 446

Query: 220 IPDDP-----------------------------QYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                                ++  W  A     ++ G+  +   
Sbjct: 447 AWYDEAGNVYVARDEDDARAQAAARGHTGALTRDDDVLDTWFSAALVPFSSLGWPADTPE 506

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 507 LK-HFLPSTVLVTGYDIIFFWVARMVMMTLHFTGEVPFQTVYVHGLVRDSEGKKMSKSEG 565

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DP+++I+                                       G DALR+    
Sbjct: 566 NTLDPVDLIDGIALEPLLAKRTTGLRRPKDAPNVDKRTRKEFPEGIPAFGADALRFTFAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------A 382
               G++  +D    +     +  N + N  +R V M  +  D  +              
Sbjct: 626 LATLGRNINFDSGRCEG--YRNFCNKLWN-ATRFVLMNTEGQDCGLQDCVGDCGPEGTLH 682

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
           F+ +D  I+S+  RV  E+ +   +         +   V +   D Y +  K  +++   
Sbjct: 683 FSPADHWIVSLLQRVETEVEKGFADYRFDNIANAIYKFVWDEYCDWYLELAKV-QIQTGT 741

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P +        + V+  +  L    +P +  +++ 
Sbjct: 742 PAQQRATRRTLLRVLETVLRLAHPIIPFITEELWQ 776



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 55/179 (30%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D LAR  R+ G + L+  GTD  G       
Sbjct: 38  GRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMQGANTLWVPGTDHAGIATQIVV 97

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        + +Q+          +   I ++    T + +   
Sbjct: 98  ERQLDAQGVSRHDLGRPAFVEKVWEWKEQSGSTITRQIRRMGASIDWEREYFTMDPKMSR 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
               ++ ++  +G IY+G     +        +D EV    +         P+   + +
Sbjct: 158 AVSDVFVRLYQQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGALWHIRYPLAQPDAK 216


>gi|163942470|ref|YP_001647354.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229559883|sp|A9VLA2|SYL_BACWK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163864667|gb|ABY45726.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 802

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELNWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    +  + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDISKEAYTGDGAHVNSAFLDGLNKEKAIVKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQENGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  ++++ L  ++     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWNKLGYSETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|325285495|ref|YP_004261285.1| Valyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324320949|gb|ADY28414.1| Valyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 877

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 19/261 (7%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLL 280
            +  +  W  +    ++    +  P+  + K++ P +  V G DIL F    +    +  
Sbjct: 455 DEDALDTWFSSWLWPMSVFNGVLEPENEEIKYYYPTNDLVTGPDILFFWVARMIVAGYEY 514

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P      +      +  K+SKSLGN  D +++IEE G D +R  L+   A G D  
Sbjct: 515 KDQKPFENVYLTGLVRDKQRRKMSKSLGNSPDALKLIEEYGADGVRVGLLLSSAAGNDLM 574

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D+   ++  N   AN I N       +I       I  P A     E   +  ++ L E
Sbjct: 575 FDEALCQQGKN--FANKIWNG----FRLIKGWEVADIAQPEASKIGLEWYNAKFNKTLLE 628

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS----TVLYVTVEVIR 456
           I ++     I  AL  +  LV       D    W L+   P        T     + V  
Sbjct: 629 IEDHFSKYRISDALMAIYKLVW------DDYSSWLLEIVKPAYQQPIDRTTYNALITVFE 682

Query: 457 QLAILLQAFVPKLANKIFDIL 477
           Q   LL  F+P L  +++  +
Sbjct: 683 QNLKLLHPFMPFLTEEVWQHI 703



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           +RE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  DREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLQGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + D+      D    L  S  +D    T +     
Sbjct: 92  VAKLKEKGINKADLTREEFLKHAWDWTDEYGGVILDQLKKLGCSCDWDRTSFTMDDHMSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLYNKGKIYRGYRMVNWDPEAQTTLSDEEVIH 190


>gi|319945678|ref|ZP_08019929.1| leucine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748038|gb|EFW00281.1| leucine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 833

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|221214935|ref|ZP_03587903.1| valyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165162|gb|EED97640.1| valyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 955

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 120/368 (32%), Gaps = 61/368 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  +   +S     + +      G  + 
Sbjct: 403 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEVFVARSEEDARAKAAAQGYTG-ALK 461

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +        F P+ + V G DI+ F    +      
Sbjct: 462 RDED-VLDTWFSSALVPFSSLGWPNETP-ELHHFLPSSVLVTGFDIIFFWVARMVMMTTH 519

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 520 FTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLETLVAKRTTGLMNPKQA 579

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 580 ATIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 636

Query: 363 SRSVSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQL 409
           +R V M  + +D  +  P               F+ +D  I+S+  R   +I +   +  
Sbjct: 637 TRFVLMNCEGHDCGLDKPEVCGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYR 696

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                + +   V +   D Y +  K  +++   P++        + V+  +  L    +P
Sbjct: 697 FDNVASSIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIP 755

Query: 468 KLANKIFD 475
            +   ++ 
Sbjct: 756 FITEALWQ 763



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  +     +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQKSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVALYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|254458347|ref|ZP_05071773.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085183|gb|EDZ62469.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 816

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 7/205 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++EK YI +   +P+ + H+GH     I+D  AR++R    +VL   G D  G     AA
Sbjct: 29  KKEKKYILSMFPFPSGRLHMGHVRNYSISDAFARYYRQQNFNVLHPIGFDSFGMPAENAA 88

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   K +   N    +     L  S+  +  + T+++ +    +     + +KG +Y
Sbjct: 89  IKNGSHPKGWTYDNIDYMKKEFVSLGFSFSKERELATSDELYTKFEQGFIIDMYEKGLLY 148

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G           P+   +   Y+F+++ Y D+LL   
Sbjct: 149 REKGLLNWCPHDQTVLANEQVVDG----CCWRCDTPIVKKDMNQYYFKITQYADELLDDL 204

Query: 181 ES-HPEFILPIERRNEVISFVKSGL 204
           +     +   +    E      +GL
Sbjct: 205 KKIEGGWPKQVLTMQENWIGKSNGL 229



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 42/255 (16%)

Query: 236 TNYLTTTGYLDNPDGSKAKFWP--------ADLHVIGKDILRFHAIYWPAF--------L 279
           +++          +  K  F P         D ++ G +    H +Y   F         
Sbjct: 503 SSWYFLRFCASPQNWEKEAFSPQQLKYWMGVDHYIGGIEHAILHLLYARFFTKVFRDLGY 562

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L  + P   K+ + G +L  G K+SKS GN +DP  +IE+ G D  R F++      ++ 
Sbjct: 563 LDFDEPF-DKLLTQGMVLKDGAKMSKSKGNTVDPDAIIEKYGADTARLFILFAAPPTQEL 621

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQ 399
            ++ + ++          I     RS S I+K     I      ++ ++         L 
Sbjct: 622 EWNDNAVEGA-----YKFIKRFFDRS-SNIVKTDTKPIIDHATLSKDEKYARKKVYEALV 675

Query: 400 EIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              +   +    +  +A  +  ++ ++                  A +   V  E    L
Sbjct: 676 RANDVYNEKYTFNTLIAGTMEAMNALN------------------AQSNSDVWSEGYWIL 717

Query: 459 AILLQAFVPKLANKI 473
           + +++  +P +   I
Sbjct: 718 SSIMEPVIPHICWDI 732


>gi|270291450|ref|ZP_06197672.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280296|gb|EFA26132.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 933

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 118/311 (37%), Gaps = 24/311 (7%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDN 247
           E+     S +     ++     G      P         IM VW D+ +++         
Sbjct: 487 ELFEKHGSDIWFEWDAKDLLPEGYTSEHSPNGTFTKETDIMDVWFDSGSSHQGVLA---- 542

Query: 248 PDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
                   +PADL + G D     F++    +  +S + P  + +     +  +G K+SK
Sbjct: 543 --KRDYLKYPADLTLEGSDQYRGWFNSSLITSVAMSGHAPYKQVISQGFTLDGQGHKMSK 600

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGN I P ++I+++G + +R +++   +   D    +D   K   +D    I N + R 
Sbjct: 601 SLGNTIVPADIIKKMGAEIIRLWVLSIDSS-SDVRVSQDNFVKI--SDSYKKIRNTI-RY 656

Query: 366 VSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
           +     D+D    T         D  +L   + +++EIR++            +++ +  
Sbjct: 657 LLANTADFDPQANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIIT 716

Query: 422 SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                Y D  K     +  +  +  ++  V  +++  L  L+   +P    +I+  L   
Sbjct: 717 DLSAFYLDFAKDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFLSEP 776

Query: 481 DENRCFQSLDQ 491
           +E      + +
Sbjct: 777 EEFVQLAEMPE 787



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               G   K             +  +     R+    L +   +D+   T +        
Sbjct: 105 LTKEGHDRKKMSTAEFRKLCRDYALKQVDKQREDFKRLGVAAEWDNPYLTLQPSFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             + K+ + G IY+G    ++S   E+   + EV   
Sbjct: 165 RTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEVEYH 201


>gi|149178687|ref|ZP_01857271.1| valyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842462|gb|EDL56841.1| valyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 974

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 117/352 (33%), Gaps = 74/352 (21%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            K+  D   ++  W  +      T G+ D        F+P  + V  +DI+      +  
Sbjct: 467 HKLMQDED-VLDTWFSSALWPHATLGWPDKNP-DLDYFYPGSVLVTSRDIITLWVARMVL 524

Query: 276 PAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                  ++P  K V  H  IL   G+ +SKS GN +DP+++I++ GVDA+R+ +     
Sbjct: 525 TGLYNMEDIPF-KHVCIHPKILDGFGQTMSKSKGNGVDPMDLIDKYGVDAVRFTIASFAG 583

Query: 335 CGKDGFY--------------------------------------------------DKD 344
             +D                                                     D  
Sbjct: 584 ETQDVRLPVGYEDPENGEVVPQTLEHQTTIPAGGEKPRIKFPKSGKSYQYTSPWFDPDPS 643

Query: 345 GLKKRVNADLA---NGIGNLVSRSVSMILKDYDGMIPTP---GAFTESDESILSVCSRVL 398
               R+ ++         N +  +    + + +G  P P      T  D  ILS  S V 
Sbjct: 644 EKVARIVSERFEYGRNFCNKLWNASRFAMLNLEGYTPAPLTESDLTMEDRWILSRLSTVA 703

Query: 399 QEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP--WELKKTNPDRASTVLYVTVEV 454
           +E+   +       A   +         D Y +  KP  W     + ++      V V V
Sbjct: 704 EEMTTVLSRYQFDVATRAIRDFTWNEFCDWYLEMIKPRLW-----DEEQKPAAQRVLVGV 758

Query: 455 IRQLAILLQAFVPKLANKIFDILF-VADENRCFQSLDQRLKPGFMLHKTFDP 505
           +  L  LLQ FVP +  +++  L  +A E   F    +      M+    +P
Sbjct: 759 LDALLRLLQPFVPFITEELWQRLNEIAPERGLFT--PEPGTESIMIAAWPEP 808



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 23/182 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+E+  I   +       H+GHA    + D++ R+ R+ G + L+  GTD  G       
Sbjct: 35  EKEQHTIMIPLPNVTGALHMGHALNGTVQDLITRWRRMQGYEALWMPGTDHAGIATQAVV 94

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
           +                         + DQ  +   +    L  S D     F  T +  
Sbjct: 95  ERRMKEEENLTRHDIGREALVERIWDWKDQYEKRILNQLRKLGASCDWQRTRF--TLDDM 152

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                R  + K+     IY+G     +    +    DDEV+       +     PV   +
Sbjct: 153 CSKAVRRTFLKLFSDDLIYRGKRLVNWDPFLQTAVADDEVFSEDIAGQFWTFQYPVVDSD 212

Query: 162 EE 163
           E 
Sbjct: 213 ER 214


>gi|297619713|ref|YP_003707818.1| isoleucyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378690|gb|ADI36845.1| isoleucyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 1053

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 81/468 (17%), Positives = 161/468 (34%), Gaps = 55/468 (11%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    G  E    + K              + + +  +           FI+  +++  D
Sbjct: 346 VHTAPGFGEDDFVVGKKYGLPAYAPLDDNGKYTESIWEGL---------FIKDMDEKIVD 396

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLR--------DEAYYNDDEVYKGADGQYYNAQHNP 156
                 K +       K  Y   +  +        ++ + +  ++              P
Sbjct: 397 VLSE--KDLLVNYGKSKHSYPHCWRCKTPLLFRSTEQWFLSISKIKDSIMEHGKTVGWTP 454

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG----LKDLSLSRK 212
             W+E    +     +        + +    LPI    E   +   G    L++ S+   
Sbjct: 455 -NWVETR--YVNGVNFVGDWNISRQRYWGIPLPIWVCEECGKYEVIGSISELEEKSIEPV 511

Query: 213 TFDWGIKIPDDPQY--------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
             D   K   DP                ++ VW D+      + G  +           A
Sbjct: 512 KLDDIHKPSVDPVKIKCSCGGVMSRVPDVLDVWYDSGLAPYASIGSKELKK--------A 563

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D    G D +   F++ +  + L+  ++P  K +     +  KGEK+SKSLGN+++P +V
Sbjct: 564 DFITEGHDQVTKWFYSQHALSELVFGDIPYKKCLMHGFTLDEKGEKMSKSLGNIVNPDDV 623

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDG 375
           I + G D LR++L+      +D  +    L++     + N + N  S SV  M L D+  
Sbjct: 624 IAKYGADILRFYLLSANKAWEDLRFAYSELEEV--RSMLNTLWNSYSFSVNYMTLDDFVP 681

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
            +         D+ ILS  + +++   E ++   +H     +   V       Y    + 
Sbjct: 682 NMDYLENCRVEDKWILSKVNSLVKTSMEALEQPFLHTYTWSIRDFVLNDLSRWYIKLIRD 741

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              ++ +      V      V+ +L +++   VP ++ KI+  L V  
Sbjct: 742 RTWQEKDSKDKLAVYQTLYYVLLKLVMIMAPVVPHISEKIYQNLKVEK 789



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 20/159 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
                Y      Y +   H+G A+   I D + RF R++G +V    G D HG  I    
Sbjct: 37  NNPDYYFVDGPPYCSGAIHLGTAWNKTIKDTVLRFKRMEGFNVSDMAGWDMHGLPIEVKV 96

Query: 63  QNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
           +N                       K F   +  N       L +   +++     +K +
Sbjct: 97  ENEFKLSSKKDIETKIGTQVFIDKCKEFALTHKANMEKQFKNLGVWLDWENAYMPIKKEY 156

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +      KK  +K  + K    G++  R E    + EV
Sbjct: 157 MEMGWWTLKKAHEKDLLEKDLRVGYWCPRCETSLAEHEV 195


>gi|229169475|ref|ZP_04297180.1| Leucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613974|gb|EEK71094.1| Leucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 802

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELNWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 142/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDISKEAYTGDGAHVNSAFLDGLNKEEAIVKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYTETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|152997852|ref|YP_001342687.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150838776|gb|ABR72752.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 1056

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 89/257 (34%), Gaps = 8/257 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++         Y         + +PA     G D     F+ +   +  L    
Sbjct: 531 VFDCWFESGAMPYAQVHYPFENKEQFERNFPAAFIAEGVDQTRGWFYTLQVLSQCLFGRP 590

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REIACGKDGFYDK 343
                + +   +   G+K+SK L N   P  ++E  G DALR +L+   +   ++  +  
Sbjct: 591 AFKNVIVNGIVMAEDGKKMSKRLKNYTPPDTLMEHYGADALRLYLINSGLVKAEEQRFSD 650

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++  V   L   +      S    +  +        +    D+ ILS    +  ++ +
Sbjct: 651 AGVQDMVRQVLLPWLNGFRFFSTYAEIDQWQDTGSDKSSDNILDQWILSRLQTLTTKVNQ 710

Query: 404 NMQNQLIHRALAQVISLV-SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            MQ   ++  +  +   +    + Y   +  + W+  K   +      +     +   + 
Sbjct: 711 EMQAYHLYNVVPALFEFIEDLTNGYIRLNRARFWQ--KEMNEDKQQAYHTLYSCLDTFSR 768

Query: 461 LLQAFVPKLANKIFDIL 477
           L+  F P LA  ++  L
Sbjct: 769 LMAPFTPFLAEHLYQEL 785



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 23/224 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 50  KHKPDYVFYDGPPFATGLPHHGHLVASTIKDIIPRYFTMKGFHVERRFGWDCHGLPIEHE 109

Query: 62  AQN-AGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                G++ K                     +  +  +    +   +D   D   RT E 
Sbjct: 110 IDKSLGMSAKEAVESLGIARYNAECRGIVQRYASEWEKTITRLGRWVDFDNDY--RTMEP 167

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            + ++   ++K++ DKG +Y+G     YS   E   ++ E           A     + +
Sbjct: 168 WYMESVWWVFKQLWDKGLVYQGDKVIAYSTELETVLSNFEASSNYKEVQDPAVTVLFKLV 227

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
           EE+ YF   +     L S         +P  + N+        L
Sbjct: 228 EEDAYFAAWTTTPWTLPSNLALCVGPDIPYVKVNDATINQTLWL 271


>gi|229135583|ref|ZP_04264363.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647856|gb|EEL03911.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 802

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELNWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 142/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++         K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASTFNLPMKEVVKGGDISKEAYTGDGAHVNSAFLDGLNKEEAIVKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|218899895|ref|YP_002448306.1| leucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226731225|sp|B7IL05|SYL_BACC2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218544919|gb|ACK97313.1| leucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 802

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G  VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYKVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTEHNINTFRNQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELDWPESLKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/415 (13%), Positives = 140/415 (33%), Gaps = 62/415 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIAKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +  +       ++ +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFVQDNGEL--SEKITDAPNKELEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                                  +  E +     ++    P +  +++  L   +
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNE 724


>gi|329962854|ref|ZP_08300739.1| isoleucine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529411|gb|EGF56324.1| isoleucine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 1162

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 104/301 (34%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 592 FQPGVYTQENYDKIDLHRPYVDDIILVSKDGKPMKRETD-LIDVWFDSGAMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  +      + +   +   G K
Sbjct: 651 ENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIATMIFDSTAYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  ILSV + +++ +          +A   +   
Sbjct: 771 FFALYANVDGFEYKEADVPMAERPEIDRWILSVLNTLVKNVDACYNEYEPTKAGRLISDF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +   +   T 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMKNPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKIKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|317130005|ref|YP_004096287.1| leucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474953|gb|ADU31556.1| leucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 805

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TTKENFYALDMFPYPSGSGLHVGHPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   FR     L  SY  D  + TT++ ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNHPNEFTVKNIDVFRKQIKALGFSYDWDREVNTTDESYYKWTQWIFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  +         ++EV  G          +PV+    + +  R++AY D+LL 
Sbjct: 148 AYVDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLRITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEELDWPESLKDMQRNWIGRSE 226



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 92/275 (33%), Gaps = 42/275 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIY 274
           K        M  W  +   YL      ++          K+ P D+++ G +    H +Y
Sbjct: 481 KKGRRETNTMPQWAGSCWYYLRYIDPHNDEALADPELLKKWLPVDIYIGGAEHAVLHLLY 540

Query: 275 WPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              +         +    P  K       +    EK+SKS GNV++P ++I+  G D LR
Sbjct: 541 ARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEGNEKMSKSKGNVVNPDDIIKSHGADTLR 600

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            + +          +  +GL         +G    + R   +I+ D   +        E 
Sbjct: 601 LYEMFMGPLDASIAWSTNGL---------DGARRFLDRVWRLIVSDNGELNHAIVD-KEG 650

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
              +     + ++++ E+ +    +  ++Q++  V+E              K        
Sbjct: 651 SAHMTRAYHQTVKKVTEDFEGLRFNTGISQMMVFVNEA------------YKQEE----- 693

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              +    I     LL    P ++ +++  L   +
Sbjct: 694 ---LCKSHIEGFVKLLSPVAPHISEELWSKLGHEE 725


>gi|32265964|ref|NP_859996.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|48428532|sp|Q7VIY7|SYL_HELHP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|32262013|gb|AAP77062.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 830

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K YI +   YP+   H+GH     I D LAR +R +G +VL   G D  G     AA  
Sbjct: 39  KKKYILSMFPYPSGAIHMGHVRNYCIGDALARNYRQNGYNVLHPMGWDAFGMPAENAAIK 98

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                K +   N    R     L +S+  +    T++  +    +  + K+ ++G IY+ 
Sbjct: 99  HKTHPKTWTYSNIDTMRKELATLGLSFSKEREFATSDAIYTRFEQEFFIKMWERGLIYRK 158

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D+    +++V +G           PV   +   Y+ +++ Y D+LL     
Sbjct: 159 EAYLNWCPKDKTILANEQVIEGK----CWRCDTPVVQKQMFQYYIKITDYADELLECLNK 214

Query: 183 -HPEFILPIERRNEVISFVKSGL 204
               +   +            GL
Sbjct: 215 LEGHWPSQVLSMQRNWIGKSKGL 237



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 37/259 (14%)

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF--------LLS 281
            +    +              S   +   D ++ G +    H +Y   +         + 
Sbjct: 517 WYFLRYSTPRKLWEKQAFDKESLTYWLNVDEYIGGIEHAILHLLYARFWTKVLRDLGYIE 576

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            + P    + + G +L  G K+SKS GN+++P E+I   G D  R F++      ++  +
Sbjct: 577 IDEPFA-NLLTQGMVLKDGAKMSKSKGNIVNPNELIAHYGADTARLFVLFAAPPTRELEW 635

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +   ++       A+     +      I               ++++         LQ+ 
Sbjct: 636 NDKAVEG------AHRFLKRLWERAEHIESCTQKPHINHKTLQKNEQYARQKVYEALQKS 689

Query: 402 RENMQN----QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
            E           +  +A  +   + ++                        V  E    
Sbjct: 690 NEIFSKKQSGYAFNTLIAASMEAFNALNE------------------QENPLVWTEGYFV 731

Query: 458 LAILLQAFVPKLANKIFDI 476
           L  +L+  VP +  ++ + 
Sbjct: 732 LLHILEPIVPHICWELSEQ 750


>gi|312863994|ref|ZP_07724230.1| leucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100407|gb|EFQ58614.1| leucine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 833

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 102/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIELMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +I+  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEEIWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|309808438|ref|ZP_07702337.1| tRNA ligases class I (M) [Lactobacillus iners LactinV 01V1-a]
 gi|308168266|gb|EFO70385.1| tRNA ligases class I (M) [Lactobacillus iners LactinV 01V1-a]
          Length = 110

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/110 (41%), Positives = 70/110 (63%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M E++  YI+T I YP+ +  IG+AY  + AD +AR+ R +G D  F TGTDEHG KI +
Sbjct: 1   MAEKKTFYITTPIYYPSGKLTIGNAYTTVAADAMARYKRNEGFDTFFLTGTDEHGLKIEQ 60

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
            A+  G+  + FVD  + +++ +  +LDISYD FIRTT++ H    +  +
Sbjct: 61  KAEAQGIKPQEFVDNMALSYKKLWKLLDISYDKFIRTTDQEHVLAVQKNF 110


>gi|298372043|ref|ZP_06982033.1| valine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274947|gb|EFI16498.1| valine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 878

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 115/371 (30%), Gaps = 60/371 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++      ++ ++    +  L   ES      P + +N       + +KD  +SR+   
Sbjct: 331 PIEPKLSMQWWLKMDGLAEPALEAVESDTVRFHPEKFKNT-YRHWMTNIKDWCISRQ-LW 388

Query: 216 WGIKIP--------------------------------------------DDPQYIMYVW 231
           WG +IP                                                  +  W
Sbjct: 389 WGHQIPAYYATQLNPPAGSLAKQVVIVAETEEEARRIADSNPDMVGGYSLRQDDDCLDTW 448

Query: 232 IDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPK 288
             +    ++    + NPD  +   ++P +  V   DI+ F    +    +          
Sbjct: 449 FSSWLWTISVFDGIVNPDNKEINYYYPTNDLVTAPDIIFFWVARMIMAGYHYRGKECFGN 508

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
             F+       G K+SK LGN  DP+ +I   G D +R  L+     G D  +D+   + 
Sbjct: 509 VYFTGIVRDKLGRKMSKQLGNSPDPLNLIARYGADGVRMGLLLTAPAGNDLPFDEALCE- 567

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
               +  N I N         + D        G      E    +  +   EI +     
Sbjct: 568 -TGRNFCNKIWNAFRLVQGWQVAD---DTAAGGDNKAEIEWFDCLLDKTTSEIADLFLKY 623

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
            +  A+  V  L  +     Y +  KP   K  +          T+  +  L  LL  F+
Sbjct: 624 RLSEAVTTVYKLFWDDFCSWYLEIVKPEYGKPID----RHTYEATLYYLACLLRLLHPFM 679

Query: 467 PKLANKIFDIL 477
           P ++  ++  L
Sbjct: 680 PFISEHLWHGL 690



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 19/181 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 8   SRQPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRNARMQGKNACWVPGTDHASIATEAKV 67

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    +  ++     +    L  S  +D    T ++    
Sbjct: 68  VAKLASEGIAKNDLSRDEFLRHAWEWTHRHGGIILEQLKKLGCSCDWDRTAFTMDEVRSK 127

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEE 163
           +   ++  +  KG IY+G     +  + +   +D+EV YK   G+ Y  ++  V    ++
Sbjct: 128 SVIRVFCDLYRKGLIYRGIRMVNWDPKAQTALSDEEVTYKEQQGKLYYLRYKIVSEHSQD 187

Query: 164 G 164
           G
Sbjct: 188 G 188


>gi|193794348|gb|ACF21386.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGEFIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|296877210|ref|ZP_06901250.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431730|gb|EFH17537.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 833

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLDVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|302916715|ref|XP_003052168.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733107|gb|EEU46455.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1089

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 44/362 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y +  E         ++    ++  +    ++             
Sbjct: 548 WCISRQLWWGHQCPVYFAKIEGGAGDIPEEKLWFAGRTEQEAEEKAKAALPGKTFTLQRD 607

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +     +   +P  +   G DIL F    +      ++ 
Sbjct: 608 EDVLDTWFSSGLWPFSTLGWPNKTHDLETL-YPTSVLETGWDILFFWIARMIMLGLKMTG 666

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD--- 338
           ++P  K+V+ H  +   +G K+SKSLGNV+DP++VI  V +D L   L++      +   
Sbjct: 667 DIPF-KEVYCHSLVRDSEGRKMSKSLGNVVDPLDVIAGVQLDYLHEKLLQGNLHPSEVAK 725

Query: 339 --------------------------------GFYDKDGLKKRVNADLANGIGNLVSRSV 366
                                           G  + D           N I       +
Sbjct: 726 ATKYQKTAFPDGIPQCGADALRFTMINATTGGGDINLDVKIIHGYRKFCNKIFQATKYVL 785

Query: 367 SMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             + +D+           T ++  IL   +   ++I + ++++   ++   V        
Sbjct: 786 GSLPQDFTPSKSGIARGKTLAERWILHKMNTAAKDINKALEDREFSKSTLIVYRYWYNEL 845

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K      T  +R S +       +     ++  F+P +  +++  +    E+
Sbjct: 846 CDVYIENSKSIIRDGTEEERNSAIQ-TLYTALEAALTMIHPFMPFITEEMWQRMPRRPED 904

Query: 484 RC 485
             
Sbjct: 905 ET 906



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+     I           H+GHA    + D++ R++R+ G   L+  G D  G     
Sbjct: 161 VKDEGSFVIVHPPPNVTGALHMGHALGDSLQDLMVRWNRMQGKTTLWLPGCDHAGISTQS 220

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +N                    T   + D+  +        L  S+D      T +  
Sbjct: 221 VVENMLWRKEGKTRHDLGRAKFVDTVWQWKDEYHKRINKALTSLGGSFDWSREAFTMDAN 280

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   W ++ ++G IY+      +  +
Sbjct: 281 LSAAVTETWVQLHEEGTIYRANRLVNWCTK 310


>gi|229062425|ref|ZP_04199741.1| Leucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716896|gb|EEL68583.1| Leucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 802

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  TEKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G +   F + N   FR+    L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 88  YALDTGNSPAEFTELNINTFRNQIKALGFSYDWDREVNTTDPTYYKWTQWIFLKLFEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G          +PV+      +  +++AY D+LL 
Sbjct: 148 AYVDEVPVNWCPALGTVLANEEIIDGKS----ERGGHPVERRPMRQWMLKITAYGDRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDELNWPESLKDMQRNWIGRSE 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 143/427 (33%), Gaps = 64/427 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++   +     K++   GDI K  Y+G  +  + A+ +    ++ + K  +    
Sbjct: 341 HDERDYEFASVFNLPMKEVVKGGDITKEVYTGDGAHVNSAFLDGLNKEEAIVKMIEWLEV 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            +  N         + F    Y  + +         +  ++     +   K+     S +
Sbjct: 401 TSAGNQKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTMTAVKEEELPLVLPKTENIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      ++    D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPETGKKGRRETNTMPQWAGSCWYYLRYIDPNNSEALVDPEKVKQ 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          + ++GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVASHGADTLRLYEMFMGPLDASIAWSENGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + ++D   +          D  +     + ++++ E+      + A++Q++  +++  +
Sbjct: 632 RLFIQDNGELSEKITDAPNKD--LEKAYHQTVKKVTEDYAELRFNTAISQMMVFINDAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR-- 484
                                  +  E +     ++    P +  +++  L   +     
Sbjct: 690 --------------------AETLPKEYVEGFVKMIAPVAPHIGEELWSKLGYNETITYA 729

Query: 485 CFQSLDQ 491
            + + D+
Sbjct: 730 SWPTFDE 736


>gi|229543463|ref|ZP_04432523.1| leucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229327883|gb|EEN93558.1| leucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 804

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+    H+GH       D+++R  R+ G +VL   G D  G    +
Sbjct: 28  ENKPKFYCLDMFPYPSGAGLHVGHPEGYTATDIVSRTKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G    VF  QN   FR     +  SY  D  I T++  ++   + ++ ++  KG 
Sbjct: 88  YAIDTGNDPAVFTIQNINTFRRQMKSIGFSYDWDREINTSDPEYYKWTQWIFLQLWKKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++EV  G          +PV       +  +++AY D+LL 
Sbjct: 148 AYIDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVIRKPMRQWMLKITAYADRLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLEELDWPENIKDMQRNWIGRSE 226



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 103/278 (37%), Gaps = 44/278 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      ++    +    D  K K W P DL++ G +    H +Y   +    
Sbjct: 491 PQWAGSCW--YFLRFIDPKNHKAIADPEKLKKWLPVDLYIGGTEHAVLHLLYARFWHKFL 548

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +S   P  +       +    EK+SKS GNV++P +++E  G D LR + +    
Sbjct: 549 YDIGVVSTKEPFQRLFNQGMILGANHEKMSKSRGNVVNPDDILESHGADTLRLYEMFMGP 608

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL         +G    + R   + +   +    +     +++ ++    
Sbjct: 609 LDASIPWSTNGL---------DGSRRFLDRIWRLFVN--EDGSLSEKIQDKANPALEKTY 657

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              ++++ E++     + A++Q++  +++  +                 A  +    VE 
Sbjct: 658 HLTVKKVTEDIDALHFNTAISQLMVFINDAYK-----------------AEVIPKTYVEG 700

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLD 490
                 LL  F P +A ++++ L  +       + + D
Sbjct: 701 F---VKLLSPFCPHIAEELWEKLGHSGTITYEAWPAFD 735


>gi|146186117|ref|XP_001033039.2| valyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146143176|gb|EAR85376.2| valyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 1037

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 77/417 (18%), Positives = 137/417 (32%), Gaps = 63/417 (15%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR-LSAYQDK 175
           G   +        LR + Y +  E+ K         +       E E  +F+ +   QD 
Sbjct: 434 GFCSRSGDVIEPMLRPQWYISCTEISKEMCRIVEQGELKIHPQGEFESNWFQFMRNPQDW 493

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSL----------SRKTFDWG-----IKI 220
            +S        I   + R +  S    G    +            R   + G     I++
Sbjct: 494 CISRQLWWGHRIPAYQYRVKGTSTSSDGTVTTNWVVGRTEDEALERAAKNLGVSKDQIEL 553

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAF 278
             D   ++  W  +     +T G+ +  D  +A F+P  +   G DIL F    +     
Sbjct: 554 IQDED-VLDTWFSSALFPFSTMGWPNQTDDLQA-FYPNSILETGWDILFFWVARMVMMGL 611

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------------------- 316
           LL   LP             +GEK+SKS GNVIDP+E+                      
Sbjct: 612 LLLNKLPFKDVFLHPMIRDSQGEKMSKSKGNVIDPLEIIDGCNLQTLIQKIQEGNLDKKE 671

Query: 317 ---------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
                            E G DALRY L+  +   +    D   +      +  N I   
Sbjct: 672 MNRAVQLKSKEYPEGFPECGSDALRYGLLAYMQQPRSINLDIKQIIG--YREFCNKIWQS 729

Query: 362 VSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
               +  I +D+              ++ ILS  ++ ++++ +   N           + 
Sbjct: 730 AKFGLMYIPRDFKYNRSFEYDQLLFINKWILSRFNKAVKDVNQYFDNYDFGNVTIAFQNF 789

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +   D Y +A KP  +  T+  + +  +     V+     LL   +P L+ +++ 
Sbjct: 790 WRDNLCDIYLEAIKP-IIYGTDEAQKNQTINTLFFVLESGLRLLHPMMPFLSEELYQ 845



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +           HIGH     + D + R  R+ G + L+  G D  G       
Sbjct: 105 SKKPYVMVIPPPNVTGYLHIGHGLTTAVEDSIIRRKRMLGFETLYLPGVDHAGIATHSVV 164

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                         + +++          +   + +D F  T + +  
Sbjct: 165 EKKLLKEENKTRFQIGREAFVSKVWEWKEKHGNQITKQLRRVGGSLDWDRFHFTMDDQLS 224

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +  +  + +KG IY+      +S   +   +D EV  
Sbjct: 225 LAVKEAFCILFEKGLIYRSNRLVNWSCALKTAISDVEVNH 264


>gi|323341519|ref|ZP_08081759.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091057|gb|EFZ33689.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 804

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+ Q  H+GH       D+++R  R+ G DVL   G D  G    + 
Sbjct: 29  DKKKFYALDMFPYPSGQGLHVGHPEGYTATDIISRMKRMQGYDVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALKTGNSPREFTKKNINNFRRQIKSLGLSYDWDREVNTTDPSYYKWTQWIFEQMYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++E+  G           PV       +  +++AY D+L+  
Sbjct: 149 YEAEIPVNWCQELGTVVANEEIIDGKT----ERGGYPVVRKPMRQWVLKITAYADRLIDD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDDLDW 210



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 144/419 (34%), Gaps = 77/419 (18%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +      K + + G++ +  Y+G     +  + +     +  D        
Sbjct: 342 HDERDYEFAKKFDLPIKPVIEGGNVEEAAYTGDGKHINSGFLDGLGKKEAIDKM------ 395

Query: 155 NPVQWMEEEG------------YFFRLSAYQDKLLSYYESHP-----------EFILPIE 191
             V+W+EE+G            + F    Y  + +                     LP  
Sbjct: 396 --VEWLEEKGIGKKKVNYRLRDWTFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPKA 453

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNP 248
              +     +S L +L       D   +        M  W         Y+         
Sbjct: 454 TDIKPSGTGESPLANLDDWVNVVDKNGRKGKRETNTMPQWAGSSWYFLRYVDPHNQGKLA 513

Query: 249 DGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHK 299
           D  K K W A DL+V G +    H +Y   +         +    P  K V     + + 
Sbjct: 514 DYDKLKHWMAVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGNN 573

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS GNVI+P +++E+ G D LR + +          + +DGL         NG  
Sbjct: 574 HEKMSKSKGNVINPDDIVEQYGADTLRLYEMFMGPLEASKPWSEDGL---------NGAY 624

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R  ++I+ + D M        E +       ++ ++++ E+      + A++Q++ 
Sbjct: 625 KFINRIWNLIIDEDDNMRDRITTINEGELDF--AYNQTVKKVTEDFTKMHFNTAISQMMV 682

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V++  +                       + +E +     LL   VP LA +++  L 
Sbjct: 683 FVNDCYK--------------------ADSLPLEYVEGFVKLLAPLVPHLAEELWTKLG 721


>gi|167563008|ref|ZP_02355924.1| valyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 955

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 116/362 (32%), Gaps = 65/362 (17%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYI 227
            + L   +                 + ++G   ++ S +          D       + +
Sbjct: 407 YQWLENIQDWCISRQLWWGHQIPAWYGENGDVYVARSEEEARAQAAANGDTGPLRRDEDV 466

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     ++ G+ ++       F P+ + V G DI+ F    +       +  +P
Sbjct: 467 LDTWFSSALVPFSSLGWPNDTP-ELRHFLPSSVLVTGFDIIFFWVARMVMMTTHFTNKVP 525

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------------- 316
                        +G+K+SKS GN +DPI++                             
Sbjct: 526 FETVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQAATIEKK 585

Query: 317 --------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
                   I   G DALR+ +      G++  +D    +     +  N + N  +R V M
Sbjct: 586 TRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLM 642

Query: 369 ILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             + +D     P               F+ +D  I+S+  RV  +I +   +        
Sbjct: 643 NCEGHDCGFDKPQSCGAADCGPGGYLDFSAADRWIVSLLQRVEADIAKGFADYRFDNIAN 702

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   V +   D Y +  K  +++   P++        + V+  +  L    +P +   +
Sbjct: 703 AIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIPFITEAL 761

Query: 474 FD 475
           + 
Sbjct: 762 WQ 763



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 56/176 (31%), Gaps = 22/176 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWLPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHELGREKFVERVWEWKEKSGSTITGQIRRLGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               R ++ ++ ++G IY+G     +        +D EV    +  +      P+ 
Sbjct: 154 SGVVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIKYPLD 209


>gi|322390802|ref|ZP_08064312.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142472|gb|EFX37940.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 833

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     +++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVADNNGALDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D+        V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAANK--------------EDKLY------VDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|320334412|ref|YP_004171123.1| Isoleucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755701|gb|ADV67458.1| Isoleucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 1087

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 75/466 (16%), Positives = 153/466 (32%), Gaps = 51/466 (10%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD--MADVLDISYDDF---I 95
               V    G D+HG  + +     G   K        + ++  +          +    
Sbjct: 374 RKYGVPLMFGVDDHG--VLQVTTERGKFFKDADKGLIADLKERGLMYRSGTLRHRYPFHD 431

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           RT +   +            K   Y    +    + +E    +       +G++ N    
Sbjct: 432 RTGDPILY----------FAKKSWYIRTNAMAERMVEENQKINWVPANIKNGRFGNWLEG 481

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK--- 212
            V W            Y    L ++ S    ++ +    E+ +     L DL L R    
Sbjct: 482 NVDW------AISRERYWGTPLPFWVSEDGDLIVVGSVQELSALTGRDLTDLDLHRPYID 535

Query: 213 --TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN------------PDGSKAKFWPA 258
             TF+   K+      ++ VW D+ +        L +                  + +PA
Sbjct: 536 DITFEQDGKVYRRVPEVLDVWFDSGSMPYAQWHLLTDETGARALPGAEANKAQFERHYPA 595

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D      D     F++++  + +L         +     +  KG K+SKS GNVI+PI +
Sbjct: 596 DFISEAIDQTRGWFYSLHAISTMLYGQPAYRNVICLGHIVDEKGAKMSKSKGNVIEPIPM 655

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
            ++ G D++R+++      G    +  + L      +  N + N+ +  V     D   +
Sbjct: 656 FDKYGADSVRWYMFTASDPGDQKRFS-ERLVAEAQRNYVNTLWNVYAFFVLYANLDRPNL 714

Query: 377 IPTPGAFT--ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQ 431
              P      E D  +L+     ++++   +           +   VS++ + Y   +  
Sbjct: 715 ADAPAVADRPEIDRWLLARLEETVRDVTSALDAYDARGGGRALERFVSDLSNWYVRRNRS 774

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + W    +    A        E +  ++ L   F P LA+ ++  L
Sbjct: 775 RFWGAGGSVDTSAYAT---LHEALLVVSQLTAPFTPFLADALYGNL 817



 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 24/139 (17%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +          N +P + H       D+  R+  + G  V    G D HG  +  +
Sbjct: 38  EGQPEFVFYEGPPTANGKPALHHVLARSFKDLFPRYKVMQGYHVTRKGGWDTHGLPVEIS 97

Query: 62  AQNA----------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE 99
            +                          +    +   +   + +   +D+  D +I T E
Sbjct: 98  VEKKLGLQGRNHGASREELEEFNRLCRTSVWETIQDWNTFTQRLGYWVDLQ-DAYI-TYE 155

Query: 100 KRHHDTCRILWKKISDKGD 118
             + +T   L K++  KG 
Sbjct: 156 NDYIETVWNLLKRLHAKGL 174


>gi|317480151|ref|ZP_07939261.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316903698|gb|EFV25542.1| isoleucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 1162

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 106/301 (35%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 592 FQPGVYTKENYDKIDLHRPYVDDVILVSKDGKPMKRETD-LIDVWFDSGAMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   + ++D            E D  ILSV + +++ +          +A   +   
Sbjct: 771 FFALYANVDEFDYKEADVPMAERPEIDRWILSVLNTLVKNVDTCYNEYEPTKAGRLISEF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D++ D +I 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMT-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTM 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VAQFKMKHPKPEMAEWGTPYFLAWTTTPW 239


>gi|170106105|ref|XP_001884264.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640610|gb|EDR04874.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1039

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/417 (14%), Positives = 132/417 (31%), Gaps = 87/417 (20%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                 +   + ++ + +  ++       ++ +    +    I P +  N+   +++ G+
Sbjct: 438 MQIPICSKSGDVIEPVLKPQWWVNCKPLAEEAIKRTRAGELLITPKQSENDWYRWLE-GI 496

Query: 205 KDLSLSRKTFDWGIK-------------------------------------------IP 221
           +D  +SR+   WG +                                           + 
Sbjct: 497 QDWCISRQ-LWWGHRCPAYFVRIEGKDQEANDGKNWVVGRTKEEATERAKVLAAGAPFVL 555

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFL 279
           +  + ++  W  +     +  G+ D        F+P  L   G DIL F           
Sbjct: 556 EQDEDVLDTWFSSGLWPFSIMGWPDKTP-DLETFYPCTLLETGWDILFFWVARMVLLGIH 614

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           L+  +P  + +         G K+SKSLGNVIDPI+VI+ + ++ L   L       K+ 
Sbjct: 615 LTGKVPFNEVLCHAMIRDAHGRKMSKSLGNVIDPIDVIQGLPLEDLHQKLYEGNLDEKEI 674

Query: 340 -----------------------------------FYDKDGLKKRVNADLANGIGNLVSR 364
                                                + + L+        N I N    
Sbjct: 675 VKAKAGQKKDFPKGIPQCGTDALRFALCAYSGGGRDINLEILRVEGYRKFCNKIFNATKF 734

Query: 365 SVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
           ++  +  ++  + +    G  +  ++ I    +    EI + + ++    A   V +   
Sbjct: 735 AMLKLDGEFVPEPIAKPTGNESLVEKWIFHKLNIAAIEINQCLADRNFMAATNAVYNFWL 794

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +A KP   +  +P    +        +     LL  F+P +  +++  L
Sbjct: 795 YELCDVYIEAMKPMTDESASPATRKSAQQTLYTCLDYGLRLLHPFMPFVTEELWQRL 851



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 44/144 (30%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G   LF  G D  G       +   
Sbjct: 114 FVIPCPPPNVTGSLHIGHALTVAIQDGLIRWNRMLGKTTLFVPGFDHAGISTQSVVEKRL 173

Query: 67  V-----------------TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCR 107
                             T   + +       +    L  SY  D    T + +      
Sbjct: 174 YKAEGKTRHDLGRERFLETVMDWKNDYQSRITNQLHRLGGSYDWDRVAFTMDPKLSKAVI 233

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ + G IY+      + ++
Sbjct: 234 ETFCRLHEDGIIYRANRLVNWCIK 257


>gi|126309571|ref|XP_001368890.1| PREDICTED: similar to Valyl-tRNA synthetase [Monodelphis domestica]
          Length = 1264

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 111/376 (29%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R        +   
Sbjct: 705  HQKIWHIWMDNIRDWCISRQLWWGHRIPAYFVTVNDPAVPPGEDPDGRYWVSGRNEEEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVPPDKISLSQDED-VLDTWFSSGLFPFSILGWPNQTE-DLSIFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI----- 317
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGKLPFKEVYLHALVRDAHGRKMSKSLGNVIDPLDVISGLSL 882

Query: 318  --------------------------------EEVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHDQLLNSNLDPSEMEKAKEGQKADFPNGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  +   +            + +D  I S  S  +    +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRALGDGFVPSPTPQASSQESLADRWIRSRLSEAVGLSHQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       + Y +  KP  L   +   A +        +     L
Sbjct: 1001 GFQAYDFPTITTAQYSFWLYDLCNVYLECLKP-VLSGKDQVAAESARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  +++  L
Sbjct: 1060 LSPFMPFVTEELYQRL 1075



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 19/157 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    +           H+GHA    I D L R+HR+ G   L+  G D  G       +
Sbjct: 334 RGTFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVE 393

Query: 64  NAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                                    + ++           L   + +D    T + +   
Sbjct: 394 KKLWRERGMSRHQLGREAFLREVWKWKNEKGDRIYHQLKKLGGSLDWDRACFTMDPKLSA 453

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + ++ + G IY+      +S    +  +D EV
Sbjct: 454 AVTEAFVRLHNDGVIYRSTRLVNWSCSLNSAISDIEV 490


>gi|269127126|ref|YP_003300496.1| isoleucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268312084|gb|ACY98458.1| isoleucyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 1059

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 66/408 (16%), Positives = 118/408 (28%), Gaps = 22/408 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H                Y         L +E    +       +G+Y     N V W  
Sbjct: 394 PHCWRCHTPLLYYALPAWYIKTTQIKDRLLEENAATNWFPETVKEGRYGEWLRNNVDWAL 453

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++               H   I  ++   E+     SGL           +     
Sbjct: 454 SRNRYWGTPLPLWLCED---EHVTAIGSLKELGELAGRDLSGLDPHRPFVDEVTFPCPQC 510

Query: 222 DDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    ++  W D+        G          + +PA      +D     F+++  
Sbjct: 511 GKEARRVPDVIDAWYDSGAMPFAQWGAPYKNKEIFERTYPAQYICEAQDQTRGWFYSLMA 570

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         +     +   G K+SK LGNV++PI +++  G DALR+F+      
Sbjct: 571 VGTLVFDKSSYENVLCVGLILAEDGRKMSKHLGNVLEPIPLMDRHGADALRWFMACNGLP 630

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-----------DYDGMIPTPGAFT 384
                     L++ V   L     N  S  V                D     P P    
Sbjct: 631 WTARRVGHAALEEIVRKVLL-TYWNTASFLVLYSNAAAASGGRPWTPDRMSEAPAPADRP 689

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDR 443
             D   LS   R + E+   ++N    RA  ++   + ++ + Y    +    +  +   
Sbjct: 690 LLDRWALSELHRTVAEVDAALENFDTTRAGRRLAEFIDDLSNWYVRRSRRRFWEGPDTPE 749

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            +       E +  L  LL   VP + + I+D++            D 
Sbjct: 750 GAAAFATLYECLETLTRLLAPLVPFITDYIWDVIRPEGAPSSVHLADW 797



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 19/147 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  P + H    +  DV  RF  + G  V    G D HG  +  A +         
Sbjct: 50  PPTANGMPGVHHVEARVFKDVFPRFKTMKGFHVPRKAGWDCHGLPVEVAVEKELGLSGKQ 109

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V ++   F  M + +   +      RT +  + ++     K I
Sbjct: 110 DIERYGVVEFNERCRESVLRHVDAFEAMTERMGYWVDMSQAYRTMDADYIESVWWSLKVI 169

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            DKG + +      Y  R     +D E
Sbjct: 170 FDKGLLVRDHRISPYCPRCGTPLSDHE 196


>gi|260654931|ref|ZP_05860419.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630246|gb|EEX48440.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 918

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 129/390 (33%), Gaps = 34/390 (8%)

Query: 108 ILWKKISDKGDIYK-GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             W+             +    + R+EA    DE  K      ++  +N V+   +    
Sbjct: 401 HCWRCHKPVVFRSTDQWFINVEAFREEALKAIDEDVKWMPTWGHDRIYNMVRERSDWCIS 460

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEV-ISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
            +                E IL  +R   V     + G             G ++   P 
Sbjct: 461 RQRIWGVPIPAFTCSQCGETILTADRIRVVSAQVARFGSDYWWSKDAEELLGHELARCPH 520

Query: 226 ---------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     I+ VW D+  ++                 WPADL++ G D     F    
Sbjct: 521 CGGALSKGTDILDVWFDSGVSHFAVLKGRP------ELSWPADLYLEGADQHRGWFQTSL 574

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  ++   P    +    F+  +G K+SKSLGNV+   +++E+ G D LR ++     
Sbjct: 575 LASVAVTGKSPYKAVLTHGFFMDGEGRKMSKSLGNVVSAQKIVEKYGADILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDES 389
              D       +   V +         +  +   +L +  G  P+          E D  
Sbjct: 635 -RSDMRISYKIVDSLVES------YRRIRNTARYLLGNLHGFNPSTDRVPYEKMGEFDRW 687

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPWELKK-TNPDRAST 446
           +L++ +R ++ + E+ +N   H     +  L V+E+   Y D  K        N      
Sbjct: 688 VLALLNRTIRRVTESYENYEFHIPTMTIHQLCVNELSSVYLDVNKDRLYADPENDTARRA 747

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              V  E++  L  +L   +   + +I+  
Sbjct: 748 TQTVMWELLTTLTRMLAPVLSFTSEEIWQA 777



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 23/231 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA--- 61
            K        Y N + H+GHA    + D + ++  ++G    +  G D HG  I      
Sbjct: 50  PKFSFHDGPPYANGEMHLGHALNKSLKDFVVKYRSMNGYACPYVPGWDTHGLPIELKVLK 109

Query: 62  --------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
                          Q    T + ++ +       +    D  ++    T +  +     
Sbjct: 110 DGGLDKDSISPVELRQKCAETARYWIGRQKEGMIRLGCFAD--WEHPYMTLQPEYEAAEL 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                + +KG +Y+G    ++ +  +      E+  G +          V +  E+    
Sbjct: 168 DALAGMVEKGYVYRGQKPVYWCIDCQTALAAAEIEYGDETSPSIF----VAYSMEDLSSK 223

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                 + +     +   + LP      V      G   +         G+
Sbjct: 224 FPELAGEPVSVVVWTTTPWTLPASMAVAVGLQYDYGFYRVEKRLYLLACGM 274


>gi|154497043|ref|ZP_02035739.1| hypothetical protein BACCAP_01336 [Bacteroides capillosus ATCC
           29799]
 gi|150273442|gb|EDN00570.1| hypothetical protein BACCAP_01336 [Bacteroides capillosus ATCC
           29799]
          Length = 940

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 126/390 (32%), Gaps = 37/390 (9%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE---------- 163
                 ++  +   Y   ++ + + D +   A       Q  P +W +E           
Sbjct: 403 HSYPHCWRCKHPIIYRATEQWFCSVDAIKDAAVKSCDEIQWKP-EWGKERMISMISERND 461

Query: 164 GYFFRLSAYQDKLLSYYE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKT-------- 213
               R   +   +  +Y      + + P    +    F + G                  
Sbjct: 462 WCISRQRVWGVPIPIFYCDDCGADIVTPETIAHVAELFREHGSNVWFEREAKDLLPEGFV 521

Query: 214 -FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G         IM VW D+ + +                 +PADL++ G D     F
Sbjct: 522 CPKCGKVHFSKETDIMDVWFDSGSTWAAVAAERPY------LKYPADLYLEGGDQYRGWF 575

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +  ++   P  +       +  +G+ + KSLGN + P EVI++ G D LR ++ 
Sbjct: 576 QSSMLTSIAVNGIAPYKQITTHGWTVDGEGKAMHKSLGNAVSPDEVIKDYGADLLRLWVA 635

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDES 389
                 +D    K+ +K+   +D    I N     + S+   + D          + D+ 
Sbjct: 636 SADY-TQDMRISKEIMKQL--SDAYLKIRNTARYMLGSLNGFNPDTDAVAYADLMDLDKW 692

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTV 447
            LS  + + + +R        H     + +   V   + YFD  K   L   +     + 
Sbjct: 693 ALSRLNELSRTVRNFYNKYEFHGVYRSLYNFCVVDLSNFYFDIIKD-RLYCGDEAGRRSA 751

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 ++  +  L+   +   + +I+  +
Sbjct: 752 QTALYRILDGMTRLVAPILAFTSEEIWQAM 781



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 64/213 (30%), Gaps = 15/213 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIG A   I+ D++ +   + G    +  G D HG  I  A
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGTALNKILKDMIVKHRNMTGWCAPYVPGWDTHGLPIESA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K + +            L +   +++   T         
Sbjct: 105 VLKDKSVKREEMTTAQFRTKCKEYAEGYIAKMTGQFQRLGVIGEWENPYITLLPEFEAKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ K+++KG IYKG    ++   D+    + E+    D         PV+  + +   
Sbjct: 165 IEVFGKMAEKGLIYKGMKPVYWCPHDQTALAEAEIEYADDPCTTIFVKFPVRDDKGKLAQ 224

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           +   +    ++                N    +
Sbjct: 225 YTDLSKTYFVIWTTTPWTIPGNFAICLNADFDY 257


>gi|241205056|ref|YP_002976152.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858946|gb|ACS56613.1| leucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 838

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 76/201 (37%), Gaps = 7/201 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           R K Y      YP+    H+GH       D+  R+ R+ G +VL   G D  G    + A
Sbjct: 30  RPKFYALDMFPYPSGAGLHVGHPLGYTATDITCRYKRMRGFNVLHPMGWDSFGLPAERHA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV   +   +N   FR     L  SYD      TT+  +    + ++ K+ +KG  Y
Sbjct: 90  MRTGVHPDITTKRNIETFRGQVQRLGFSYDWSREFATTDPAYVRWTQWIFLKLFEKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +     A   D+EV  G     Y    +PV       +  R++AY D+LL   
Sbjct: 150 QEEIAVNWCPAQNAVLADEEVKDG----RYVETGDPVIRRRMRQWMLRITAYADRLLQGL 205

Query: 181 ESHPEFILPIERRNEVISFVK 201
           +           +   I   +
Sbjct: 206 DGLDWPENLKTMQRNWIGRSE 226



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 107/315 (33%), Gaps = 74/315 (23%)

Query: 224 PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL         +       ++W P DL+V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSCWYYLRFLDPENTSEPVGREAERYWMPVDLYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +S   P  +      + +H +    G                          
Sbjct: 547 KVLYDIGVVSTEEPFQRLFNQGMILAHSYRDAAGRYYAPSFVVEEEGRWLAGSVEMQRAV 606

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS  NV++P +V+ + G DALR + +          +   G+          G+  
Sbjct: 607 EKMSKSRLNVVNPDDVVHQFGADALRLYEMFMGPLDAAKPWQTAGVI---------GVRR 657

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R+  ++  + DG+         S   +L +  + ++ +  +++    + A+++++ L
Sbjct: 658 FLERAWRIVCDESDGLSAAVLEAASS-PQLLRLRHQTVKAVTADIEAIRFNTAVSRLMEL 716

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            + +    +A +P                   EV+  L +LL  F P +A +++  L   
Sbjct: 717 ANALTA--EAVRPR------------------EVVETLVLLLAPFAPHIAEELWSKLGHG 756

Query: 481 DENRCFQSLDQRLKP 495
            E   + S       
Sbjct: 757 -ETLTWVSWPTFDPA 770


>gi|290769947|gb|ADD61716.1| putative protein [uncultured organism]
          Length = 1162

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 107/301 (35%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+ +       Y  
Sbjct: 592 FQPGVYTQENYDKIDLHRPYVDDIVLVSKAGKPMKRESD-LIDVWFDSGSMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  I+SV + +++++          +A   +   
Sbjct: 771 FFALYANVDGFEYKEADVPMAERPEIDRWIISVLNTLVKDVDNCYNEYEPTKAGRLISDF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 61/209 (29%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D+       
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMQNPYI-- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|268611662|ref|ZP_06145389.1| isoleucyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 933

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 107/299 (35%), Gaps = 16/299 (5%)

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
            R+    ++    + +   +    + G         IM VW D+  ++ +     D P  
Sbjct: 504 FRKEGSDAWWTKEVSEFIPASVKCECGCGEFTKEYDIMDVWFDSGVSHTSVMEGEDFPSL 563

Query: 251 SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           S    WPADL++ G D     F +    + +   + P          +  +G+ + KSLG
Sbjct: 564 S----WPADLYLEGADQYRGWFQSSLLTSVVFKGSSPYKAVCTHGWVVDGEGKTMHKSLG 619

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N IDP E+ ++ G D LR ++        D    K  L +   +D    I N     +  
Sbjct: 620 NGIDPSEITDQYGADILRLWVASSDY-HSDIRISKPILSQL--SDAYKKIRNTARFILGN 676

Query: 369 ILKDY----DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VS 422
           +        D    +    TE D+  +     ++ +++E  +    H A   + +   + 
Sbjct: 677 LGNGNGFNPDKDSVSDDKLTELDKWAMMKLDALIDKMKEGYEAFDFHIAFHALHNFCVID 736

Query: 423 EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             + Y D  K     +K + +           ++  +  L    +   A +I+  +  A
Sbjct: 737 MSNFYLDIIKDRLYCEKEDSEVRRAAQTAMYRILSAITRLAAPIISFTAEEIWQFMPHA 795



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 15/163 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   H+GHA    + D + ++  + G    +  G D HG  I   
Sbjct: 55  KGKPSYVLHDGPPYANGDIHLGHALNKSLKDFIVKYKNMTGFCAPYVPGWDTHGLPIELK 114

Query: 62  -------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +      N       +     YD    T    +    
Sbjct: 115 AMKAIGVKDGAIPPTELRKHCREYAMTQVANQMKGFKRIGSLGDYDYPYLTLRPEYEAKQ 174

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             ++  ++ KG +YKG    ++         + E+    D  Y
Sbjct: 175 VEVFGAMAKKGYMYKGLKPVYWCPSCNTALAEAEIEYSNDPCY 217


>gi|329118511|ref|ZP_08247215.1| valine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465246|gb|EGF11527.1| valine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 942

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 133/404 (32%), Gaps = 77/404 (19%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 385 EPESEFKGLSLADKAKRAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 442

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 443 AWYDEAGNVYVARNQAEAEKQADKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 502

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 503 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 561

Query: 313 PIEVIEEVGVDAL-------------------------------------RYFLVREIAC 335
           P+++I+ +G+D L                                     R+ +    + 
Sbjct: 562 PVDLIDGIGLDELLVKRTTGLRKPETAPAVRKATEKLFPEGIPAMGADALRFTMASYASL 621

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSV 393
           G+   +D          +  N + N  +  V M  +  D       P A+T +D+ I+  
Sbjct: 622 GRSVNFDFKR--AEGYRNFCNKLWN-ATNFVLMNTEGQDCGQDETQPLAYTFADQWIIGK 678

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             +      E  +      A   +   V     D Y +  K  +++   P    T     
Sbjct: 679 LQQTEAAAAEAFETYRFDLAAQTLYEFVWNEYCDWYIELAKV-QIQTGCPTTRRTTRRTL 737

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V V+  +  LL   +P +  +++  +      +   S+     P
Sbjct: 738 VRVLEAILRLLHPIMPFITEELWQTVAPLANAKTADSIMLAAYP 781



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       +
Sbjct: 32  KPSFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVE 91

Query: 64  --------------NAGVTTKVFVDQNS------RNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +N       +  R +    D   + F  T ++   
Sbjct: 92  RQLAAEGVSRHDLGREAFLEKVWAWKNISGGTITQQMRRVGCSADWQREYF--TMDEARA 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 150 QTVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|327399977|ref|YP_004340816.1| Isoleucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315485|gb|AEA46101.1| Isoleucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 1046

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 70/393 (17%), Positives = 135/393 (34%), Gaps = 63/393 (16%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E        +     +P+ +   E +F ++S  ++ +L   ++     +P          
Sbjct: 382 EETIVHRYGHCWRCKSPIIYRATEQWFLKVSELKEVMLKEIDA--VRWIPEWAGMARFKD 439

Query: 200 VKSGLKDLSLSRKTFDWGIKI--------------------------------------- 220
             S  KD  +SR+   WGI I                                       
Sbjct: 440 WVSNAKDWCISRQR-YWGIPIPVWICEKCGAMKVVGSIDDVPWESDLDLHRPKIDEVTFE 498

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                       +  VW D+      T  +    +    + WPAD    G D     F++
Sbjct: 499 CECGGTMRRVADVFDVWFDSGVASWATLHFPRKKE-DFERLWPADFITEGHDQTRGWFYS 557

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               + +     P    +     +  +G K+SKSLGNV++P EV+E++GVDA R +++  
Sbjct: 558 QLGASVVAFNRAPYKTVLMHGFTLDEQGRKMSKSLGNVVEPEEVVEKIGVDAFRLYVLSS 617

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAF------TE 385
            A  +D  +  +  + +    + N   N V  + + M L   D +      F      T 
Sbjct: 618 -ALWEDLRFSWE--EAKNYNRMLNIFWNAVRFAYMYMSLDRKDFISSILADFEYEKHQTV 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDR 443
            D  I+S    + +   E ++N  +HR +      +       Y    +P   ++ +   
Sbjct: 675 EDRWIISKLESLNKLAVEALENYQLHRVVRAFFDFIVEDFSRWYVQLIRPRVWEEKDSPS 734

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   + V+ ++  ++  + P LA  I+  
Sbjct: 735 KIAAYATILRVVDKVTKIIAPYAPFLAEWIYQH 767



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 19/159 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
            +      Y   + H+G A+  +I D + RF R+ G  V+   G D HG  I    +   
Sbjct: 37  FFFVDGPPYTTGRIHLGTAWNKVIKDTVLRFKRMRGFKVIDIPGWDMHGLPIEVKVEQEL 96

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                                 +  QN          L +  ++D+   T +  + +   
Sbjct: 97  GFKTKRDIESYGIEKFVARCMEYALQNKSAMTQQFKRLGVWMNWDNPYMTIKADYINAAW 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              K+  D+G + +      +  R E    D EV    +
Sbjct: 157 WTIKQAYDRGLLERKQMVVNWCPRCETALADAEVEYWDE 195


>gi|119953049|ref|YP_945258.1| leucyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782485|sp|A1QZ46|SYL_BORT9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119861820|gb|AAX17588.1| leucyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 842

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G      
Sbjct: 33  KEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPMGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F++    L  +Y  D  IRT ++ ++   + ++ K+  KG  
Sbjct: 93  AIQTGEHPKKITEKNIEKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY        +++EV +  DG       + VQ      +  +++ Y ++L+  
Sbjct: 153 YIKEMPVWYCPDLGTVLSNEEVIQTPDGPRSERGFHKVQRKPLRQWVLKITEYAERLIKD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEEIDWPESVKEMQKNWI 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 67/480 (13%), Positives = 153/480 (31%), Gaps = 103/480 (21%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFIRTTEK 100
                      H ++  + A+   +  K  V Q  N+           IS    I T E+
Sbjct: 338 YGTGAVMSVPAHDERDFEFAKKYNLPIKQVVSQTGNNEILTKPFTENGIS----INTPEE 393

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++     +  K+ +     K           +  ++    +        +   N +   
Sbjct: 394 FNNLKTEKVKTKVIEWLTKNKKGQKKVNYKLRDWIFSRQRYWGEPIPIIIDDDLNEIPLE 453

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E+E         +   +  Y+       P+ +    ++  ++G      +     W    
Sbjct: 454 EDE------LPLRLPEIENYKPSDTGESPLSKVQNWVNVKRNGKIYKRETNTMPQWA--- 504

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
                            YL      +     K  +W P DL++ G +    H +Y   + 
Sbjct: 505 ---------GSCWYYIRYLDPNNEKEFASKEKINYWMPVDLYIGGAEHSVLHLLYARFWH 555

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   ++   P  K      + S  +    G                          
Sbjct: 556 KVLYDLGYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVKKRDNKFFSKTNNKELKQ 615

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL N+I+P ++I+E G D++R + +          ++  GL          GI
Sbjct: 616 IIAKMSKSLKNIINPDDIIKEYGADSMRIYEMFMGPLTDSKPWNTQGLI---------GI 666

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +++  ++  K+               + I+S   + ++++ E+++N   + A++ ++
Sbjct: 667 FRFLNKIWAIKNKELTKESAA--------KEIISGLHKTIKKVTEDIENLNFNTAISSLM 718

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             ++E            L K + +         +E+ + L I+L  F P L  ++++ + 
Sbjct: 719 IFINE------------LLKHDKNY--------LEIFKPLTIILAPFAPHLGEELWEYMG 758


>gi|330880735|gb|EGH14884.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 334

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 78/334 (23%), Positives = 131/334 (39%), Gaps = 37/334 (11%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
           A  ++ AD+ ARF R  G DV+F  GTDEHG     AAQNA +  K + +      R + 
Sbjct: 2   AGSLLPADIYARFLRQQGHDVMFICGTDEHGTPAEIAAQNANMDVKSYCNHMYEVQRRIY 61

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-- 142
               +S++ F R++  ++ +  +  + K+ D G I++   S +YS  +  +  D  +   
Sbjct: 62  ANFGLSFNFFGRSSCDQNVEITQEFFFKLQDAGYIFEDVISQYYSAVEGRFLPDRFINGQ 121

Query: 143 ---------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY------------- 180
                     G       A  NP + +  +         + +  S+              
Sbjct: 122 CPRCGFLSATGDQCDGCGALLNPEELINPKSSISGDEKLELRRTSHLFLDLEKTVPLLQK 181

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--DDPQYIMYVWIDALTNY 238
                    + R          GLK   ++R    WGI +P       + YVW DA   Y
Sbjct: 182 WHDSNRWGNLTRGIISKWMDNEGLKARCITRDN-KWGIPVPLLHLTPKVFYVWFDAPYAY 240

Query: 239 LTTTGYLDNPDGSKA----KFWPAD----LHVIGKDILRFHAIYWPAFLLSA--NLPLPK 288
           +  T    +  G       K+W +D       + KD + FHAI+WPA LL++  N+ L  
Sbjct: 241 IAITKAYGDTLGDAETILKKWWYSDSVEYTQFMAKDNVPFHAIFWPAQLLASRDNVKLVD 300

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            +    ++ + G K S S    +   + +E    
Sbjct: 301 DIKGFNWLTYDGGKFSTSRLRGVFLDQALELFPA 334


>gi|307566041|ref|ZP_07628499.1| isoleucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345229|gb|EFN90608.1| isoleucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 1220

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 105/297 (35%), Gaps = 40/297 (13%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-------------------------- 254
                 ++ VW D+ +       Y      +K+                           
Sbjct: 665 MYRESDLIDVWFDSGSMPYAQLHYPFEGKINKSGLERHGMTEEEYREKLVHSTYEGVAVA 724

Query: 255 --FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
             F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK +GNV
Sbjct: 725 PAFFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHVGNV 784

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I P E+++  G D +R++++       +  +D +G+ +         + N  S       
Sbjct: 785 ISPFEMLDRYGADPVRFYMMTNSEPWDNLKFDPEGVDE-CRRKFFGTLYNTYSFFALYAN 843

Query: 371 KD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
            D       +       E D  I+S  + +++ +   M N    RA   + + V     +
Sbjct: 844 VDGYEGGANVSMSIEAPEIDHWIISKLNSLVKGVTVEMNNYDPTRAGRLIDAFVNNDLSN 903

Query: 426 RY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            Y   + ++ W   K   +   +        +  ++ LL  F P  A++++  L  +
Sbjct: 904 WYVRLNRKRFW--GKDMSEDKKSAYSTLYTCLMTVSRLLAPFAPFYADELYKDLGGS 958



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 24/169 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   K          N  P I H     I D   R+  + G  V    G D HG  +   
Sbjct: 38  EGEPKFIFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMQGFQVKRKAGWDTHGLPVELG 97

Query: 62  AQNA----------------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRT 97
            +                            +  V + +  +R + + +   +  D    T
Sbjct: 98  VEKELGITKKDIDNPASEKYISTVDYNHKCRENVMKFTAEWRQVTEEMGYFVDMDHPYIT 157

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 158 YDNKYIETLWWLLKQLYNKGLLYKGYTIQPYSPGAGTGLSSHELNQPGC 206


>gi|224438368|ref|ZP_03659295.1| valyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144810|ref|ZP_07807003.1| valyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129841|gb|EFR47458.1| valyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 903

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 134/407 (32%), Gaps = 76/407 (18%)

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
           +    E Y    G+ Y    + V+    + +F +    Q+  +    +      P +  N
Sbjct: 336 FVEKIEDYTNQVGKCYR-CGSIVEPYISKQWFVKKEVAQE-AIKKVNAGGLKFFPNQWLN 393

Query: 195 EVISFVKSGLKDLSLSRKTFDWG--IKIPDDP-------------------------QYI 227
              +     LKD  +SR+   WG  I +                             + +
Sbjct: 394 N-YNAWMRELKDWCISRQ-LWWGHRIPVWYCECGEKIACESDNPTCPKCNALITKQDEDV 451

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAK--------------------FWPADLHVIGKDI 267
           +  W  +     +T G+ +  +    +                    F+P  L + G DI
Sbjct: 452 LDTWFSSGLWAFSTLGWGNIQESKDDENTESAKSAESALFTDSDLSDFYPNSLLITGFDI 511

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           L F    +      L  +LP             KG+K+SKS GNVIDP+E+I   G D L
Sbjct: 512 LFFWVARMLLSGESLLGSLPFKDVYLHALVRDEKGQKMSKSKGNVIDPLEMISTYGADTL 571

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-- 383
           R+ L    A G+D        +   N    N + N          +  +    T  AF  
Sbjct: 572 RFTLAILCAQGRDVKLSTQSCEISKN--FINKLYNATQFLKLYASQQDEIQNKTFKAFKN 629

Query: 384 -------TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPW 434
                  T   + +       + E+R+ +++   +   + +   +     D   +     
Sbjct: 630 LSEIEIQTPLGQYMFVRLQVAINEVRQALESYRFNDGASILYRFLWGEFCDWGIE----- 684

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            L K + D      Y    + +   +LL  ++P + + ++  L  ++
Sbjct: 685 -LAKASKDSV----YELGAIFKTALLLLHPYMPFVTDWLWHSLNGSE 726



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 22/153 (14%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++  EK  I           HIGHA    + D++ RF R+DG   L+  G D  G     
Sbjct: 38  IQNGEKFCIMMPPPNVTGVLHIGHALTFTLQDIITRFKRMDGFKTLYQPGLDHAGIATQN 97

Query: 61  AAQNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
             Q               + F+ +                R +      S   F  T +K
Sbjct: 98  VVQKQLAQEGISKESLGREAFIKKVWEWKEQSGGAILNQMRHLGITPAWSRLRF--TMDK 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
              +  +  + +  ++G I +  Y   + + D 
Sbjct: 156 GLQNAVKKAFVQWYNQGLIVQDNYMINWCVNDG 188


>gi|48477483|ref|YP_023189.1| isoleucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74568043|sp|Q6L206|SYI_PICTO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|48430131|gb|AAT42996.1| isoleucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 1024

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 65/345 (18%), Positives = 124/345 (35%), Gaps = 17/345 (4%)

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR------KTF 214
           E + +      Y    L  +  +    L I  R++++ +     +DL          K  
Sbjct: 443 EAKDWALSRDRYWGTPLPIWRCNKNHYLAIGSRDDLLKYGGYIPEDLHRPYIDDVVLKCP 502

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
           + G ++     Y++  W D+ +       Y  + D +K+  +P D      D     F+ 
Sbjct: 503 ECGSEMHR-ESYVIDTWFDSGSASYAAMHYPFSKDFTKS-HFPVDFITEAIDQTRGWFYT 560

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           ++  A LL         V     +   G+K+SKS GN I  I+ + + G DA R F    
Sbjct: 561 LHVVASLLFDENAYKNVVSISHILDENGQKMSKSKGNFIAAIDFLNDYGADAARMFFFTG 620

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
                        L   +     + + N+ S   S    D              D  +LS
Sbjct: 621 APWNSKSV--NKKLIGEITRKNLSTLLNVYSFFASNANIDEYRFTEIKEPENLLDRWMLS 678

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRY--FDAQKPWELKKTNPDRASTVLY 449
             +  + ++RENM N  IH AL  +  L+SE+ + Y     ++ WE    +    +    
Sbjct: 679 RLNTTIIKVRENMDNYNIHTALRYIEDLISELSNVYLRLSRKRFWEGNLDDSKERA--YS 736

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                +R+   ++    P  +  ++  L     +   +S  + ++
Sbjct: 737 TLYYTLRETIKMMAPITPFFSEYLYQKLSPGMPSVHMESYPEAIE 781



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 3/148 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTT-GTDEHGQKIAKAAQ 63
           +           N +PH+GH     + D + R+  + G D+L  T G D HG  +   A+
Sbjct: 43  KPFAFLEGPPTANGRPHVGHLMTRAVKDTVMRYKYMTGHDILRRTGGWDCHGLPVELEAE 102

Query: 64  NAGVTTKVFVDQNS--RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                      +N     F          Y D     +             I+ K D  +
Sbjct: 103 KHFGFKNKKDIENFGIEKFNQYCRDSVFRYIDEWNIVDDLVGFWVDKENSYITLKNDYME 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             +    +L +      D        + 
Sbjct: 163 SEWWALKTLYENNLLVKDYKIVPYCPRC 190


>gi|291563588|emb|CBL42404.1| leucyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 803

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLKGKYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +    N +N +   + +     +D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAISTASNIKNIKRQINQIAALYDWDMEVNTTDPSFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G           PV       +  +++AY D+LL+ 
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTPVTKKNLRQWMLKITAYADRLLND 203

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 204 LDKLDWPEKVKKMQTDWI 221



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 114/346 (32%), Gaps = 56/346 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 413 YKLRDWVFSRQRYWGEPIPIVHCPKCGNVPVPEDQLPLKLPEVESYQPTGTGESPLAAID 472

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W         Y+      +     KA  + P D+++ 
Sbjct: 473 SWVNTTCPCCGAPAKRETNTMPQWAGSSWYFLRYVDNKNDQELVSKEKADKYLPVDMYIG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 533 GVEHAVLHLLYSRFYTKFLYDIGVIDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPDD 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G DALR + +       D  +D  G++         G+   ++R  ++++   D 
Sbjct: 593 LVRDYGCDALRMYELFVGPPELDAEWDDRGIE---------GVARFLNRFYNLVMDSKDK 643

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            I          + ++ +  +++ +I        ++  ++  +      ++  D  K   
Sbjct: 644 DIKET-------KEMVKLRHKLVYDIETRFNQFSLNTVVSGFMEY---CNKLTDVAK--- 690

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K+   D+         E ++   ILL  F P L  +++  L   D
Sbjct: 691 -KEGGIDK---------ETLKTFVILLAPFTPHLGEELWRELGGTD 726


>gi|270296793|ref|ZP_06202992.1| isoleucyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270272780|gb|EFA18643.1| isoleucyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 1162

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 106/301 (35%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 592 FQPGVYTKENYDKIDLHRPYVDDVILVSKDGKPMKRETD-LIDVWFDSGAMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   + ++D            E D  ILSV + +++ +          +A   +   
Sbjct: 771 FFALYANVDEFDYKEADVPMAERPEIDRWILSVLNTLVKNVDTCYNEYEPTKAGRLISEF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D++ D +I 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMT-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTM 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VAQFKMKHPKPEMAEWGTPYFLAWTTTPW 239


>gi|160888272|ref|ZP_02069275.1| hypothetical protein BACUNI_00682 [Bacteroides uniformis ATCC 8492]
 gi|156862218|gb|EDO55649.1| hypothetical protein BACUNI_00682 [Bacteroides uniformis ATCC 8492]
          Length = 1162

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 106/301 (35%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 592 FQPGVYTKENYDKIDLHRPYVDDVILVSKDGKPMKRETD-LIDVWFDSGAMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELLDSHQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSISYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   + ++D            E D  ILSV + +++ +          +A   +   
Sbjct: 771 FFALYANVDEFDYKEADVPMAERPEIDRWILSVLNTLVKNVDTCYNEYEPTKAGRLISEF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D++ D +I 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMT-DPYI- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTM 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VAQFKMKHPKPEMAEWGTPYFLAWTTTPW 239


>gi|238764641|ref|ZP_04625586.1| Isoleucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697133|gb|EEP89905.1| Isoleucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 944

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 117/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ E G     +   ++          + +P+     +  E +    + L +    R 
Sbjct: 447 VQWIPEWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSTELMEEVAKRV 506

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 507 E-QEGIQAWWDLDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----VRPEFGGHS 561

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 562 P-DMYLEGSDQHRGWFMSSLMIATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 620

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 621 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 673

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI E   N   H  + +++   S      Y
Sbjct: 674 GFDPALHQVAPEEMVVVDRWAVGRAQAAQAEIMEAYDNYDFHLVVQRLMQFCSVEMGSFY 733

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 734 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNQL 784



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|117925437|ref|YP_866054.1| isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609193|gb|ABK44648.1| Isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 954

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 82/450 (18%), Positives = 137/450 (30%), Gaps = 37/450 (8%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNS---RNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
            D++G+ +      AG   K    Q          +     I  SY    R +       
Sbjct: 371 VDDYGKFVEGTPFFAGEHIKKANPQVVTLLDERGALLASSKINHSYPHCWRCSTPLITRA 430

Query: 106 CRILWKKISDKGDIYK-----GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
               +  +       K        S      +E  +N  E               P+  +
Sbjct: 431 TPQWFISMEINDLRKKALQAIKDTSWIPHWGEERIHNMVENRPDWCVSRQRTWGVPIAVL 490

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
                   +                           + F K   + L    +    G + 
Sbjct: 491 SCTDCGQIVRDEAITENIAVAMEQA--------GADVWFEKEAAQFLPADYRCSGCGSQH 542

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+   +                 WPADL++ G D     FH+    + 
Sbjct: 543 FKKESDILDVWFDSGVTHAAVLERRPQ------LRWPADLYLEGSDQHRGWFHSSLLASV 596

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KG K+SKS GNVI P +VI++ G D LR ++  E   G D
Sbjct: 597 GTRDRAPYKAVLTHGFVVDGKGHKMSKSRGNVIAPEKVIKQYGADILRMWVSAEDYAG-D 655

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                + LK    +D    I N +   +S  L  +D    T   G   E D   L   +R
Sbjct: 656 IRISDEILKGL--SDAYRRIRNTIRYLIS-NLSGFDAAEHTVPYGQLLELDRWALDRVAR 712

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTV 452
           +++++ +   +   HR    +     V     Y D  K   L    PD     +   V  
Sbjct: 713 LIRDVEKAYTDYTFHRVYQSLHYFCGVEMGAFYLDIIKD-RLYCDAPDSVERRSAQTVMH 771

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482
            ++  L  L+   +   A +++  +    E
Sbjct: 772 HMLETLVRLMAPVMAFTAEEVWHYMAGERE 801



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 20/161 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   +     Y N   H+GHA   ++ D++ +  ++ G+D ++  G D HG  I   
Sbjct: 45  QGKQPFILHDGPPYANGHLHMGHAINKVLKDIICKSRQMQGMDAVYVPGWDCHGLPIELK 104

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDISYDD---FIRTTEKRH 102
           A+                      + F  +     ++    L +S D    ++    +  
Sbjct: 105 AEQELKAEGKEKEEIDVVAFRQRCRTFAGKWVETQKEEFQRLGVSGDWHNPYLTMDYRFE 164

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            D  R L + + + G  YKG    ++   D     + EV  
Sbjct: 165 ADIVRELGRFLHNGGL-YKGAKPVYWCTHDVTALAEAEVEY 204


>gi|320334398|ref|YP_004171109.1| leucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755687|gb|ADV67444.1| leucyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 821

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 6/194 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++K Y  T   YP+   HIGH Y  ++ D  AR+ R+ G +VLF  G D  G     AA 
Sbjct: 40  KQKHYALTMFPYPSGNLHIGHWYAYVVPDARARWMRMRGYNVLFPMGFDAFGLPAENAAI 99

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  + +   N +        +   I +     T +  ++   +  + ++ ++G  YK
Sbjct: 100 KRGINPRTWTLDNIQYMTGQFRRMGTMIDWSRQFATCQPEYYRWNQWFFTRMFERGLAYK 159

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D+    +++V  G            V+      + F+++ Y ++LL +  
Sbjct: 160 KESFVNWDPVDQTVLANEQVVDG----RGERSGALVERRLMSQWHFKITEYAEELLDFSG 215

Query: 182 SHPEFILPIERRNE 195
           +     + + ++N 
Sbjct: 216 TDMPERVRLMQQNW 229



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/319 (17%), Positives = 105/319 (32%), Gaps = 43/319 (13%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LP +            L            G     D    M  ++D  + Y+        
Sbjct: 462 LPDDVEFLPTGQSPLKLHPTWSKTTCAKCGGPAERDTD-TMDTFVD-SSWYMYRFTSPHF 519

Query: 248 PDGSKAKF-----WPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHG 294
                 K       P DL+  G +    H +Y   +   A          P         
Sbjct: 520 DQAPWDKDAAERLTPIDLYTGGIEHAILHLLYSRFWTKVARDLGLTSNSEPFRALRNQGI 579

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +    EK+SKS GNVIDP ++++E G D +R +L+        G +   G+        
Sbjct: 580 ILGEDQEKMSKSRGNVIDPDDLVQEYGADTVRTYLMFIAPWEVGGPWSASGI-------- 631

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            NG    +SR  S+    +D     P   T ++  +       LQ++  + +    +  +
Sbjct: 632 -NGPSKWLSRVWSL---YFDENASGPAENT-TEAELRYATHTTLQKVTGDFERLSFNTIV 686

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           A ++   + +             K +P   +       E +R   ++L   VP +A +++
Sbjct: 687 AALMEYTNAL----------VKAKRSPAFGTDAW---AEALRIFNLMLAPIVPHIAEELW 733

Query: 475 DILFVADEN--RCFQSLDQ 491
                A       + S+D+
Sbjct: 734 RESGHAQSVHLEAWPSVDE 752


>gi|20806841|ref|NP_622012.1| leucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|48428549|sp|Q8RCT6|SYL_THETN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|20515309|gb|AAM23616.1| Leucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 819

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY      YP+  + HIGH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 33  KKLYCLEMFPYPSGAKLHIGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 92

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  I T    ++   + ++ K+ + G  Y+
Sbjct: 93  KTGIHPYDSTMENIRTMERQLREMGVTFDWDYEIITCLPEYYKWTQWIFLKLYEAGLAYR 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   E   +FF+++AY ++LL   +
Sbjct: 153 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKELTQWFFKITAYAEELLEKLD 208

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I   +
Sbjct: 209 DLDWPEKTKMMQRNWIGKSE 228



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 115/323 (35%), Gaps = 41/323 (12%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LP +   E             ++      G     DP   +  ++D  + Y        N
Sbjct: 453 LPYDVEFEPTGESPLKKHAGFMNVTCPKCGGPALRDPD-TLDTFVD-SSWYYLRYPDNKN 510

Query: 248 PDGSKAKFW-----PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHG 294
                 K W     P D +V G +    H +Y             L+ + P    V    
Sbjct: 511 DKEPFNKEWINKMLPVDKYVGGAEHATMHLLYSRFITKVLRDLGYLNFDEPFLSLVHQGT 570

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +   G ++SKS GNVI P + I++ G D  R +L+   +  + G +  +G+K       
Sbjct: 571 ILGPDGSRMSKSRGNVISPDDYIKQYGSDVFRLYLMFGFSYSEGGPWSDEGIKA------ 624

Query: 355 ANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              I   V+R    I K  +       T     ++++ +  V    ++ +  +      +
Sbjct: 625 ---IARFVNRVERFIEKFIETRQNPGKTKEEMEDAEKELNYVRHYTIKHVTLDADKFEFN 681

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A+++ LV+ + +Y            N       +    +V+R    +L  F P  + 
Sbjct: 682 TAIARIMELVNALYKY-----------ENEVEVKN-MKFYEDVVRDFVKILAPFAPHFSE 729

Query: 472 KIFDILFVADE--NRCFQSLDQR 492
           ++++ L       N+ +   D++
Sbjct: 730 EMWERLGYEYSVFNQKWPEWDEK 752


>gi|21226416|ref|NP_632338.1| valyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74526566|sp|Q8Q024|SYV_METMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|20904675|gb|AAM30010.1| Valyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 869

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 71/410 (17%), Positives = 135/410 (32%), Gaps = 31/410 (7%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +   + D G +Y                   E+               ++  +E  ++
Sbjct: 313 QAVISDLRDAGFLYNQKPLEQNVGLCWRCDTPIEILSEPQWFVKINHEGILKAADEINWY 372

Query: 167 ---------FRLSAYQDKLLSYYESHPEFILPIERRNEV------ISFVKSGLKDLSLSR 211
                          +       +      +PI    +                + ++ +
Sbjct: 373 PEYMKVRLQNWTGTMEWDWCISRQRIFATPIPIWYCKKCGEVMIAEESWLPIDPNENVPK 432

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
           K    G    +    ++  W+D+    L  +G+            PA +   G DI+R  
Sbjct: 433 KACACGSTEFEPETDVLDTWMDSSITALHVSGWES----EHDLRLPAQIRPQGHDIIRTW 488

Query: 272 AIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A Y    +  L    P    V +   +   G K+SKSLGNVI P EV  +   DA R + 
Sbjct: 489 AFYTILRSLALEGKRPWDSIVINGMVLGPDGHKMSKSLGNVISPEEVTTQYSADAFRQWG 548

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTES 386
               + G D  +    +     +     + ++   S+S  LKD+D        P +    
Sbjct: 549 AVGGSTGSDVMFRWKDVVSA--SRFLQKMWSIYRFSMS-HLKDFDPADAENFPPDSLYTI 605

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  +LS  +R+++   + +           +     E   D Y +  K   L   N +  
Sbjct: 606 DRWLLSKLNRLVESTTKELDGYQFDSTFKAIRGFAWEVLADNYLELVK-GRLYGENKEGR 664

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRL 493
               YV     R L++LL  F+P  A +++     A    R + ++++ L
Sbjct: 665 KAAQYVLYTTTRTLSLLLAPFIPFFAEEMYSRFDSASVHTRAWPAVNESL 714



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 15/158 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  I T   YP    HIG+A      D +AR+ R+ G +V+F  G D HG       
Sbjct: 36  TRPQYIIDTPPPYPTGNFHIGNALNWCYIDFVARYKRMRGYNVMFPQGWDCHGLPTEVKV 95

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
           +     TK                  N    R     L  S D  +   T E  +    +
Sbjct: 96  EETHGITKNQVPRAEFRRMCRELTAGNIDKMRQTMLRLGFSVDWSNEFVTMEPSYFVKTQ 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
             + ++ + G IY   +   +  R E      EV    
Sbjct: 156 KSFVRMYNNGHIYHEDHPVNWCPRCETAIAFAEVEYDQ 193


>gi|299143964|ref|ZP_07037044.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518449|gb|EFI42188.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 803

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+ Q  H+GH       D++AR  R +G +VL+  G D  G      
Sbjct: 30  DKEKFYALVEFPYPSGQGLHVGHPRPYTALDIVARKRRYEGYNVLYPMGWDAFGLPTENF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +       QN   F+     +  S+D    + TT+ +++   + ++ ++  +G  
Sbjct: 90  AIKNKIHPAKVTKQNVNRFKKQLKSIGFSFDWSREVNTTDPKYYKWTQWIFLQLFKRGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +A   ++EV     G       + V    +  +  +++ Y  +LL  
Sbjct: 150 YKTEMPVNWCPSCKAGLANEEVV----GGKCERCGHEVVRKVKSQWMLKITDYAQRLLDD 205

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E          ++   I   +
Sbjct: 206 LEEVDYIERVKTQQKNWIGRSE 227



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 116/346 (33%), Gaps = 61/346 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   LS   
Sbjct: 415 FKLRDWVFSRQRYWGEPIPLIYCEKCGWVPVPEAELPVLLPDVENYEPTDNGESPLSKID 474

Query: 212 KTFDWGIKIPDD----PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFWPA-DLHVI 263
              +                M  W         Y      ++       K+W A D +  
Sbjct: 475 SWVNTTCPHCGGFAKRETDTMPQWAGSSWYFLRYTDPDNDMELASKEALKYWTAVDWYNG 534

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      + + GEK+SKS GNVI+P +
Sbjct: 535 GMEHTTLHLLYSRFWHKFLYDIGVVPTKEPYKKRTSHGMILGNNGEKMSKSRGNVINPDD 594

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I + G D LR + +      K+  +  +G+K         G    + R  ++       
Sbjct: 595 IIRDYGADTLRTYEMFIGDFEKNAPWSDNGVK---------GCRRFLERVWNL------- 638

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    +  +S+ S   + ++++  + +N   + A+A ++SL++E    F+  K   
Sbjct: 639 -QSILNNGEDYSKSLESSIHKAIKKVSHDYENLKANTAIAALMSLLNE----FNENK--- 690

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                         +T + ++   ILL    P +  ++++I  +  
Sbjct: 691 -------------SITKKDLKTYLILLNPVAPHITEELWEITNLGG 723


>gi|171778891|ref|ZP_02919953.1| hypothetical protein STRINF_00814 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282537|gb|EDT47961.1| hypothetical protein STRINF_00814 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 833

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    +
Sbjct: 29  TDKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG 
Sbjct: 89  YAMDTGNDPAEFTAKNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL 
Sbjct: 149 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + +   I
Sbjct: 206 DLDDLDWPESIKDMQRNWI 224



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 98/302 (32%), Gaps = 79/302 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D+++ G +    H +Y   +         +   
Sbjct: 499 WYFLRYIDPHNDEKMADEELLKAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 558

Query: 284 LPLPK---------------------------------KVFSHGFILHKGEKISKSLGNV 310
            P  K                                  + +   +     K+SKSL NV
Sbjct: 559 EPFQKLFNQGMILGTSYRDHRGVLVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNV 618

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E  G D LR + +          + ++GL+              + R   ++ 
Sbjct: 619 VNPDDVVERYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLLT 669

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     E++ ++  V +  ++ + E ++    + A+AQ++  V+  +     
Sbjct: 670 --------TKEIVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAAN----- 716

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  K +         + V+  +    LL  F P L+ +++  L  + E+  + +  
Sbjct: 717 -------KEDK--------LFVDYAKGFVQLLAPFAPHLSEELWQTLTQSGESISYVAWP 761

Query: 491 QR 492
             
Sbjct: 762 TW 763


>gi|308801771|ref|XP_003078199.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116056650|emb|CAL52939.1| putative valyl tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1076

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 99/316 (31%), Gaps = 58/316 (18%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +  G+ D      A+F+P  L   G DIL F    +      L+
Sbjct: 591 DEDVLDTWFSSGLFPFSVFGWPDETP-DLAEFYPTSLLETGHDILFFWVARMVMMGMKLT 649

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------ 317
             +P  +           G K+SKSLGNVIDP+ VI                        
Sbjct: 650 GKVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPLHVIEGIDLAALNATLLGGNLDEKEVKK 709

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DA+R+ LV   A G+D   D   +             N +  
Sbjct: 710 ATQAQKADFPEGIPECGTDAMRFALVSYTAQGRDINLDVLRVVA------YRHWCNKLWN 763

Query: 365 SVSMILKDYDGMIPTPGAFT---------ESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           +    + +       P  F           + + +LS  +         M+    + A  
Sbjct: 764 ATKFAMMNLGDGYVPPTDFNSSFDVKNIPLAAKWVLSRLNAACAGTNAGMEAYDFNNATN 823

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            V +       D + +  KP  +  T+              +     LL  F+P +  ++
Sbjct: 824 SVYAFWQYELCDVFIEIIKP-IMSGTDEVAKKQTRDALWICLDAGLRLLHPFMPFVTEEL 882

Query: 474 FDILFVADENRCFQSL 489
           +  L    +    +S+
Sbjct: 883 WQRLPRTRDENTPKSI 898



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/448 (10%), Positives = 119/448 (26%), Gaps = 52/448 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + K  I           HIGHA    I D + R+ R+ G + L+  GTD  G      
Sbjct: 137 TNKPKFVIVIPPPNVTGALHIGHALTNAIQDTIVRWRRMSGYEALWVPGTDHAGIATQTV 196

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +      +                  + D       +    +  S D      T +++ 
Sbjct: 197 VEKKLQREEGVTRHDLGREKFLERVFEWKDVYGGKICNQLRRIGSSMDWSREAFTMDEKL 256

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK----GADGQYYNAQHNPVQ 158
               +  + ++ D+G IY+      +S + +   +D EV      G            V+
Sbjct: 257 SKAVKEAFVRMHDEGLIYRDNRLVNWSCQLKTAISDIEVDHIELEGPTMLSVPGHKKQVE 316

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +     + +     Q +++         +                L    L        I
Sbjct: 317 FGVITSFAYPREDGQGEVVVATTRIETMLGDTAVAVHPEDERYKSLHGKFLVHPFNGRKI 376

Query: 219 KIPDDPQYIMYVWIDAL--TNYLTTTGYLD---NPDGSKAKFWPADLHVIGKDILRFHAI 273
            +  D + +   +                      +      +  +  +  +   +F  +
Sbjct: 377 PVICDAELVDMEFGTGCVKITPAHDPNDFQTGKRHNLDFINVFNEEGLINEQGGEQFQGM 436

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL-----------------GNVIDPIEV 316
                 ++    L K        L++G+  +                       ++   +
Sbjct: 437 RRFECRVAITEALDK------LGLYRGKASNPMRLGLCSRSKDVIEPMLKPQWWVNCAGM 490

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDK-DGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
            ++    A    L    +  +  ++   + ++    +        + +  V    ++   
Sbjct: 491 AKDACDAARDKRLEILPSFMEPTWFRWLENIRDWCISRQLWWGHRIPAFYVRFSGENDTD 550

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRE 403
                G+  + D  ++       + + E
Sbjct: 551 SGMPGGSSEQLDRWVIGRDMAEARTVAE 578


>gi|253682435|ref|ZP_04863232.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562147|gb|EES91599.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 812

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 86/231 (37%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+  + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSGAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    QN +N  +    +    ++D  I T    ++   + ++ K+ +KG  Y+
Sbjct: 91  KTGIHPQDSTMQNIKNMEEQLKAMGAMFNWDHEIVTCLPDYYKWTQWVFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V+      +F +++ Y D+LL   +
Sbjct: 151 KNAPVNWCPSCNTVLANEQVLDGH----CERCDSEVEKKALTQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                      +   I   K       +  S  TF+      D    + YV
Sbjct: 207 ELDWPEKTKAMQKHWIGKSKGVEATFKVENSDITFNVFTTRVDTLNGVTYV 257



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 109/339 (32%), Gaps = 35/339 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + ++ G            L Y             ++E            
Sbjct: 418 QRYWGAPIPVVYCDKCGTVAIPEEQLPVELPYNIEFTPDGKSPLSKSEEFLHTTCPKCGG 477

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ YV                       K  P D +V G + 
Sbjct: 478 HAIRETDTLDTFVCSSWYYLRYV--------DNNNSEKAFDIDKVNKMLPVDKYVGGPEH 529

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 530 ACMHLLYARFITKALRDMGYLNFDEPFKSLTHQGLILGPDGLKMSKSKGNTIAPDDYIKE 589

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  D +K            + V R +    ++++    T
Sbjct: 590 YGADVFRMYLMFGFAYSEGGAWSDDAIKSMGR------FIDKVERLLDDAKEEFNNSKNT 643

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                ++++ +       +Q I E+      + A+A+++   + + +Y + +        
Sbjct: 644 KSTMEKAEKELNYARHYAIQHITEDTDKFQFNTAIARIMEYTNSLSKYLNEE-------- 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                +  +    E +     LL  F P  + + +++L 
Sbjct: 696 -----NINIKFLKEALCDYVKLLAPFAPHFSEEQWELLG 729


>gi|207344893|gb|EDZ71882.1| YGR264Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 359

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMII-ADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               + I++A+ Y N  PH+G+    ++ AD+ AR+ +    + LF  GTDE+G      
Sbjct: 194 NERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETK 253

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   GVT +   D+  +   D+     I +D F RTT  +  +  + ++ K++  G + +
Sbjct: 254 ALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEE 313

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
                 Y     +Y  D  V       +Y
Sbjct: 314 QSMKQLYCPVHNSYLADRYVEGECPKCHY 342


>gi|227890503|ref|ZP_04008308.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867441|gb|EEJ74862.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 805

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 139/411 (33%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +       ++ + GD+ K  Y+G     +  + N  +  +  D      + 
Sbjct: 342 HDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDFLNGMDKDEAIDAINNWLEE 401

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           N V           + F    Y  + +                     LP     +    
Sbjct: 402 NGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLYLPKATDIKPSGT 461

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+      +  D  K K W
Sbjct: 462 GESPLANLDDWVNVVDENGRKGRRETNTMPQWAGSSWYFLRYIDPHNNHEVADYEKLKEW 521

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P +L+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 522 LPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSK 581

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++E+ G D LR + +          + ++GL          G    ++R  +
Sbjct: 582 GNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGL---------GGAHKFINRVWN 632

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ + D +          D  +  + +  ++++ E+ +    + A++Q++  V+   + 
Sbjct: 633 LLIDENDNLRDRVTTINNHD--LDKIYNETVKKVTEDYEAMHFNTAISQLMVFVNNAYK- 689

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + +E +  L  LL   VP +  +++  L 
Sbjct: 690 -------------------ADSLPLEYVEGLVKLLSPVVPHITEELWSKLG 721



 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+L+  
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVIRKPMRQWVLKITAYADRLIDD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDDLDW 210


>gi|145589896|ref|YP_001156493.1| valyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048302|gb|ABP34929.1| valyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 963

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 79/551 (14%), Positives = 161/551 (29%), Gaps = 108/551 (19%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFTTGT-------DEHGQKIAKAAQNAGVTTKVF 72
           E ++ DV         R+  L G  V             D++             T    
Sbjct: 236 ETLLGDVAVMINPEDERYKHLIGKLVNLPLCDRQIPIIADDYVDVNFGTGVVKV-TPAHD 294

Query: 73  VDQNSRNFRDMADVLDI-SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +  +   R    +++I + D  I       +        +     D+            
Sbjct: 295 FNDYAVGQRHQLPLINILTLDAKINENAPATYQGLERFAARKQVVADLEAAGLLEKVQPH 354

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
                  D      +    +     +    ++  +   S+     L         ++P  
Sbjct: 355 KLMVPRGDRTQTIIEPMLTDQWFVAMSKPSQDNQYQPGSSIAGAALDAVTKGDIKLVPEN 414

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKI------------------------------- 220
             N    +++  ++D  +SR+   WG +I                               
Sbjct: 415 WINTYTQWLE-NIQDWCISRQ-LWWGHQIPAWYGEDGQIFVARSEEEAKTKAVAAGYTGQ 472

Query: 221 -PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
              DP  ++  W  +     ++ G+ +        F P+ + V G DI+ F    +    
Sbjct: 473 LNRDPD-VLDTWFSSALVPFSSLGWPEETPALN-HFLPSSVLVTGFDIIFFWVARMVMMT 530

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------ 319
              +  +P             +G+K+SKS GN +DPI++I+                   
Sbjct: 531 CHFTGKVPFHTVYVHGLVRDAEGQKMSKSKGNTLDPIDLIDGIKIEELVNKRTTGLMNPK 590

Query: 320 -------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                               G DALR+      + G++  +D+   +     +  N + N
Sbjct: 591 QAESIGKKTKKEFPDGIPAFGTDALRFTFASLASLGRNINFDQKRCEG--YRNFCNKLWN 648

Query: 361 LVSRSVSMI---------LKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQL 409
             +R V M          L   D      G   F+ +D  I+S+  R   E+ +  QN  
Sbjct: 649 -ATRFVLMNCPGGDEDNGLAPCDNQCGPEGYLDFSPADRWIVSLLQRTEAEVDKGFQNYR 707

Query: 410 IHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  +   V +   D Y +  K  +L+   P +        + V+  +  +    +P
Sbjct: 708 FDNIATGIYQFVWDEYCDWYLELAKV-QLQTGTPAQQRATRRTLLRVLETILRMAHPLIP 766

Query: 468 KLANKIFDILF 478
            +   ++  + 
Sbjct: 767 FITETLWQTVG 777



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 58/176 (32%), Gaps = 22/176 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   I D L R  R+ G + L+  GTD  G      
Sbjct: 48  EGKGNFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRHARMAGKNTLWVPGTDHAGIATQIV 107

Query: 62  AQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +                    KV+  +       +R  R +   +D   + F  T + +
Sbjct: 108 VERQLDAQKVSRHDLGREKFLEKVWEWKETSGSTITRQIRRLGASIDWGKEYF--TMDSK 165

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 166 MSKAVVEVFVRLHEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGSMWHIRYPL 221


>gi|33597415|ref|NP_885058.1| valyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81426706|sp|Q7W6P3|SYV_BORPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33573842|emb|CAE38151.1| valyl-tRNA synthetase [Bordetella parapertussis]
          Length = 960

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 116/346 (33%), Gaps = 53/346 (15%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           QD  +S        I      +  +   +S  +    +R     G  +  DP  ++  W 
Sbjct: 441 QDWCISRQLWWGHQIPAWYSEDGQVFVARSEQEAQEQARAAGVAG-PLTRDPD-VLDTWF 498

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     TT G+ ++    + ++ P+ + V G DI+ F    +      ++ ++P     
Sbjct: 499 SSALVPFTTFGWPEDTPDLR-RYLPSSVLVTGFDIIFFWVARMVMLTMHMTGSVPFKHVY 557

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEE------------------------------- 319
                    G+K+SKS GN +DP+++I+                                
Sbjct: 558 VHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLEGLVRKRTFGLMNPKQAGAIEKATRRQY 617

Query: 320 ------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+ +      G++  +D    +   N        N +  +   +L + 
Sbjct: 618 PDGIPAFGTDALRFTMAAYATLGRNINFDLKRCEGYRN------FCNKLWNATRFVLMNT 671

Query: 374 DGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +G       G  + +D  I+S    +  E+     +         +   V +   D Y +
Sbjct: 672 EGHALDGDGGELSFADRWIVSQLQALEAEVERGFADYRFDNVANALYRYVWDEYCDWYLE 731

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             K    + T   +  T     + V+  +  L    +P +  +++ 
Sbjct: 732 LAKVQIQQGTPAQQLGT-RRTLIRVLEAVLRLAHPVIPFITEELWQ 776



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 72/248 (29%), Gaps = 23/248 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           H+GHA+   I D L R+HR+ G D +F  GTD  G      
Sbjct: 49  TDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGDDTVFVPGTDHAGIATQIV 108

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +Q+          L  S D      T + R  
Sbjct: 109 VERQLDAQKVSRHDLGREKFVEKVWEWKEQSGSTITGQVRRLGASADWPREYFTMDARMS 168

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR-----DEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                 + ++  +G IY+G     +  +      +     +EV        Y     P  
Sbjct: 169 RGVAETFVRLYQQGLIYRGKRLVNWDPKLLTAVSDLEVQSEEVDGHMWHILYPFVDGPQT 228

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +++G    L               +  L +   +     +   L +L L  +      
Sbjct: 229 ITDQDGNTVTLRGMTIATTRPETMLADGALCVHPDDPRYKHLLGKLVELPLCDRNIPIIA 288

Query: 219 KIPDDPQY 226
               DP +
Sbjct: 289 DDFVDPDF 296


>gi|222475038|ref|YP_002563453.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
 gi|222419174|gb|ACM49197.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
          Length = 829

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA + GV
Sbjct: 34  YVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYGV 93

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              V+ ++N  + R     + ISY  D  + T ++ ++   +  +     +G  Y+    
Sbjct: 94  NPAVWTERNIESMRKQLKSIGISYNWDRELATCKEDYYKHEQAFFLDFLQQGLAYRKESW 153

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V  G            ++  +   +F +++ + D LL   ++   
Sbjct: 154 VNWDPVDNTVLANEQVVDG----RGWRSGAKIERRKLSQWFLKITDFADSLLDGLKTLDG 209

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 210 WPEKVKLMQERWIGKTEG 227



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 143/442 (32%), Gaps = 74/442 (16%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHNPVQW 159
           D  ++++     + D+ K  YSG  + R+  + N   V    +              V  
Sbjct: 346 DIYQVVFPDDGVQYDLQKEAYSGDGTYRNSEFLNGLRVDAARNAMIQKLESMGGCRRVTN 405

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
                +      Y    +         I+P++R++  IS  +        +       W 
Sbjct: 406 YRLHDWGISRQRYWGCPIPVVHCEKCGIVPVDRQDLPISLPEEVDFSRGGNPLDHHPTWK 465

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILR 269
                  Q       D    +  ++ Y       +         K  P D ++ G +   
Sbjct: 466 HVQCPKCQSSAQRETDTFDTFFESSWYFAAFCSEQGGINAADCNKLLPVDYYIGGVEHAV 525

Query: 270 FHAIYWP--------AFLLSANLPLPKKVFSHGFI------------------------- 296
            H +Y             L+   P    +                               
Sbjct: 526 LHLLYARFFCRALKKCGHLAVEEPFRNLITQGMVCHSVYRDAAGNYLFPEDSQRMIRDGE 585

Query: 297 ---LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
              L K EK+SKS  NV+DP  +I++ G D +R F++ +    +D  +   G++      
Sbjct: 586 AVQLGKVEKMSKSKKNVVDPSHIIKKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWR-- 643

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               +  L   + S I  D+D            D   LS   ++L+ +  +M++  ++ A
Sbjct: 644 YLERLWRLFEDNSS-IGADFDT-----ADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 697

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+   + + V   F+  K                 V  E +  L  +++ F+P +A K+
Sbjct: 698 VAKFREMSNTV---FEMVK-----------CGVSQQVINESVCILLRVMEPFIPHIAEKL 743

Query: 474 FDILFVADE--NRCFQSLDQRL 493
           ++ +       NR + S  + L
Sbjct: 744 WERIGGEGMLCNRQWPSAREDL 765


>gi|195154941|ref|XP_002018371.1| GL16801 [Drosophila persimilis]
 gi|194114167|gb|EDW36210.1| GL16801 [Drosophila persimilis]
          Length = 1048

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 127/425 (29%), Gaps = 97/425 (22%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
              +   + V+ + +  ++   S           S    I+P             G++D 
Sbjct: 452 PICSRSKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWY-HWMDGIRDW 510

Query: 208 SLSRKTFDWGIKI------PDDP------------------------------------- 224
            +SR+   WG +I        DP                                     
Sbjct: 511 CVSRQ-LWWGHRIPAYHVSFSDPSIQTGTSDDEQYWIVARSEAEALSKAADRFKVDASKI 569

Query: 225 -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                + ++  W  +     +  G+ DN       F+P  L   G DIL F    + +  
Sbjct: 570 VLKQDEDVLDTWFSSGIFPFSVFGWPDNTK-DLQTFYPTSLLETGHDILFFWVARMVFFG 628

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
             L   LP  +           G K+SKSLGNVIDPI+VI                    
Sbjct: 629 QKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPIDVILGITLEGLHAQLVGSNLDPR 688

Query: 318 -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                             E G DALR+ L   I   +D   D + +         N + N
Sbjct: 689 EIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINLDINRVLG--YRFFCNKLWN 746

Query: 361 LVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
               ++     +  +   +    A  + D  ILS  +  ++      ++     A +   
Sbjct: 747 ATKFALLYFTGNEKFSTDLSASDAVNQMDAWILSRLAAAIEACNTGFESYDFAAATSACY 806

Query: 419 SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D Y +  KP   +  +  + +         +     LL  F+P +  +++  
Sbjct: 807 AFWLYDLCDVYLECLKP-IFQGGSEQQQTEARRTLYVCLDFGLRLLSPFMPFITEELYQR 865

Query: 477 LFVAD 481
           L  A+
Sbjct: 866 LPRAN 870



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 129 KFVMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 188

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      D    L  SYD      T + +     
Sbjct: 189 LWRDEQLSRHDLGRDKFIERIWDWRREKGGRIYDQLKSLGSSYDWSRVNFTMDPKLCRAV 248

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ ++G IY+      +S 
Sbjct: 249 TEAFVRLHEEGSIYRSSRLVNWSC 272


>gi|88808557|ref|ZP_01124067.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
 gi|88787545|gb|EAR18702.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
          Length = 878

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 5/199 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    
Sbjct: 51  FYALSMFPYPSGTLHMGHVRNYVITDVIARAQRMRGDAVLHPMGWDAFGLPAENAAIERQ 110

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           +   ++ D+N    +   D L +S D      T    ++   + L+ ++ D+G  Y+   
Sbjct: 111 IDPGIWTDRNIEQMKAQLDRLGLSIDWSREQATCHADYYRWTQWLFLELLDQGLAYQKDA 170

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +  +   D+    +++V               V+      +F R++ Y D LL   +   
Sbjct: 171 TVNWDPVDQTVLANEQVDSE---GRSWRSGALVEQKNLRQWFLRITHYADALLDDLDLLN 227

Query: 185 EFILPIERRNEVISFVKSG 203
            +   +            G
Sbjct: 228 GWPERVRTMQANWIGRSIG 246



 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 19/182 (10%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK--RVNADLANG 357
            EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   ++   R    L   
Sbjct: 630 FEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADVEGQFRFLQRLWRL 689

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ-NQLIHRALAQ 416
           I ++ S     +L +   ++P     +E +  I       ++ + ++++     + A+++
Sbjct: 690 IESVRSDHQDQLLSE-PTVVPEGSVLSEQESGIRRAVHTAIEAVSDDLRGEYQFNTAISE 748

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           ++ L + +                   A     V  E I  L  LL  F P LA + +  
Sbjct: 749 LMKLSNALSGSL---------------AEASRSVQAEAISALIRLLAPFAPHLAEEFWFS 793

Query: 477 LF 478
           L 
Sbjct: 794 LG 795


>gi|90961419|ref|YP_535335.1| leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993086|sp|Q1WUT3|SYL_LACS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90820613|gb|ABD99252.1| Leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 805

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 139/411 (33%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +       ++ + GD+ K  Y+G     +  + N  +  +  D      + 
Sbjct: 342 HDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDFLNGMDKEEAIDAINNWLEE 401

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           N V           + F    Y  + +                     LP     +    
Sbjct: 402 NGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLYLPKATDIKPSGT 461

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+      +  D  K K W
Sbjct: 462 GESPLANLDDWVNVVDENGRKGRRETNTMPQWAGSSWYFLRYIDPHNNHEIADYEKLKEW 521

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P +L+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 522 LPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSK 581

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++E+ G D LR + +          + ++GL          G    ++R  +
Sbjct: 582 GNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGL---------GGAHKFINRVWN 632

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ + D +          D  +  + +  ++++ E+ +    + A++Q++  V+   + 
Sbjct: 633 LLIDENDNLRDRVTTINNHD--LDKIYNETVKKVTEDYEAMHFNTAISQLMVFVNNAYK- 689

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + +E +  L  LL   VP +  +++  L 
Sbjct: 690 -------------------ADSLPLEYVEGLVKLLSPVVPHITEELWSKLG 721



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+L+  
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVIRKPMRQWVLKITAYADRLIDD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDDLDW 210


>gi|33602156|ref|NP_889716.1| valyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81430667|sp|Q7WHM6|SYV_BORBR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33576594|emb|CAE33672.1| valyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 960

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 116/346 (33%), Gaps = 53/346 (15%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           QD  +S        I      +  +   +S  +    +R     G  +  DP  ++  W 
Sbjct: 441 QDWCISRQLWWGHQIPAWYSEDGQVFVARSEQEAQEQARAAGVAG-PLTRDPD-VLDTWF 498

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     TT G+ ++    + ++ P+ + V G DI+ F    +      ++ ++P     
Sbjct: 499 SSALVPFTTFGWPEDTPDLR-RYLPSSVLVTGFDIIFFWVARMVMLTMHMTGSVPFKHVY 557

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEE------------------------------- 319
                    G+K+SKS GN +DP+++I+                                
Sbjct: 558 VHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLEGLVRKRTFGLMNPKQAGAIEKATRRQY 617

Query: 320 ------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+ +      G++  +D    +   N        N +  +   +L + 
Sbjct: 618 PDGIPAFGTDALRFTMAAYATLGRNINFDLKRCEGYRN------FCNKLWNATRFVLMNT 671

Query: 374 DGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +G       G  + +D  I+S    +  E+     +         +   V +   D Y +
Sbjct: 672 EGHALDGDGGELSFADRWIVSQLQALEAEVERGFADYRFDNVANALYRYVWDEYCDWYLE 731

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             K    + T   +  T     + V+  +  L    +P +  +++ 
Sbjct: 732 LAKVQIQQGTPAQQLGT-RRTLIRVLEAVLRLAHPVIPFITEELWQ 776



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 72/248 (29%), Gaps = 23/248 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           H+GHA+   I D L R+HR+ G D +F  GTD  G      
Sbjct: 49  TDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGDDTVFVPGTDHAGIATQIV 108

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +Q+          L  S D      T + R  
Sbjct: 109 VERQLDAQKVSRHDLGREKFVEKVWEWKEQSGSTITGQVRRLGASADWPREYFTMDARMS 168

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR-----DEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                 + ++  +G IY+G     +  +      +     +EV        Y     P  
Sbjct: 169 RGVAETFVRLYQQGLIYRGKRLVNWDPKLLTAVSDLEVQSEEVDGHMWHILYPFVDGPQT 228

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            ++ EG    L               +  L +   +     +   L +L L  +      
Sbjct: 229 IIDAEGNTVTLRGMTIATTRPETMLADGALCVHPDDPRYKHLLGKLVELPLCDRNIPIIA 288

Query: 219 KIPDDPQY 226
               DP +
Sbjct: 289 DDFVDPDF 296


>gi|152980087|ref|YP_001352005.1| valyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166225523|sp|A6SUQ8|SYV_JANMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|151280164|gb|ABR88574.1| valyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 965

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 126/398 (31%), Gaps = 91/398 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG +F   +  +  L    +    +LP    N   +   + ++D  +SR+   WG  I 
Sbjct: 389 PEGTYFPGKSITEVALEKVANGEIKMLPENWTNT-YNQWLNNIQDWCISRQ-LWWGHQIP 446

Query: 220 IPDD-----------------------------PQYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                              + ++  W  +     +T G+ +    
Sbjct: 447 AWYDSEGKVYVARNEDEAKAKATAAGYNGPLTRDEDVLDTWFSSALVPFSTLGWPEETP- 505

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P              G+K+SKS G
Sbjct: 506 DFKTFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFKTVYVHGLIRDSSGQKMSKSKG 565

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DPI++I+                                       G DALR+ +  
Sbjct: 566 NTLDPIDLIDGINVDELVAKRTVGLMNPKQAASIEKSTRKEFPAGISAYGTDALRFTMAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----------- 380
             + G++  +D    +     +  N + N  +R V M  + +D                 
Sbjct: 626 YASLGRNINFDLSRCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGFRDAPCAAGDCDPGG 682

Query: 381 -GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK 437
              F+++D  I+S   R   +I +   +       A +   + +   D Y +  K     
Sbjct: 683 YTDFSQADRWIVSKLQRTEADIAKGFADYRFDNIAASLYQFIWDEYCDWYLEVAKVQIQT 742

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            T   + +T     + V+  +  L    +P +   ++ 
Sbjct: 743 GTEAQQRAT-RRTLLRVLETILRLAHPVIPFITEALWQ 779



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           ++    I           H+GH +   I D L R+HR+ G +  +  GTD  G       
Sbjct: 33  DKPAFSIQLPPPNVTGTLHLGHGFNQTIMDGLTRYHRMRGFNTAWIPGTDHAGIATQIVV 92

Query: 60  ------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +      +  + FV++                R +    D S + F  T ++  
Sbjct: 93  ERQLDAQKITRHDLGREKFVEKVWEWKEKSGSTITGQIRRLGASPDWSREYF--TMDEPR 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 SKTVTEVFVRLVEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGQMWNIRYPL 205


>gi|225165517|ref|ZP_03727340.1| valyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224800235|gb|EEG18642.1| valyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 1008

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 132/424 (31%), Gaps = 105/424 (24%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++    + ++ R    + +            +  ER  +V       ++D  +SR+   
Sbjct: 393 PIEPRLTQQWWLRYP--RVEEAKQVVRDGLIKMHPERWTKVYLNWLENIQDWCISRQ-LW 449

Query: 216 WGIKI------------------------------------PDDPQYIMYVWIDALTNYL 239
           WG +I                                        + ++  W  +     
Sbjct: 450 WGHRIPVWYAKGVDREKLTEADLRDPKKIHVSLDGPADSENWIQEEDVLDTWASSWLWPF 509

Query: 240 TTTGYLDNPD------GSKAKFWPADLHVIGKDILRFHAIYW---------PAFLLSANL 284
            T G+ D  D         A+ +P      G DI+ F              P   +   +
Sbjct: 510 ATQGWPDELDASSAAADFYARHYPTTTLATGADIIFFWVARMIMAGLEFTHPGAPVEQRI 569

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P     F+      +G K+SK+LGN  DP+++I + G D LR+ L++    G+D  +D+D
Sbjct: 570 PFKHVYFNGIVRDKQGRKMSKTLGNSPDPLDLIAKYGADGLRFGLLQIAPLGQDVKFDED 629

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG----------------------- 381
            ++   N    N + N   R   M     +   PT                         
Sbjct: 630 RIEAGKN--FCNKLWN-ACRFRQMNGTAANIQHPTSNIQHPTANSEQSPPPPPSGAAAPH 686

Query: 382 ----------------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
                                    + D +IL+      + +  +        A  ++ S
Sbjct: 687 FDVGCSTLDVGCSRILARIDAQKLDDDDHAILAALLDTTRILERSFGEFEFATATQRLYS 746

Query: 420 LVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  D Y +  K   ++  +P     VL +   VIRQ  +L   F P +  +++ +L
Sbjct: 747 FFWNDFCDWYVEVSKA-RVQDPDPAVRDHVLAIQDFVIRQFLLLFHPFAPFITEELWHLL 805

Query: 478 FVAD 481
             A 
Sbjct: 806 GYAK 809



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 53/179 (29%), Gaps = 20/179 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   I           H+GH     + D L R  RL+G    +  GTD  G       + 
Sbjct: 40  EPYTIVIPPPNVTGILHMGHVLNNTLQDALIRRARLEGKAACWIPGTDHAGIATQTMVEK 99

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDT 105
               T                   + D+           L  S  +D    T +  +   
Sbjct: 100 HLRQTEKKTRRDIGRDAFLKRVWAWRDEKGDKILQQLRELGCSCDWDRTHFTMDPGYSRA 159

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQWMEEE 163
               + K+ + G IY+G     +        +D+EV      G  Y  ++  V  +E  
Sbjct: 160 VLTSFIKLFNAGHIYRGKRMVNWCPASLTALSDEEVEMRPTKGHIYRLRYELVAPLEHP 218


>gi|85372673|gb|ABC70128.1| valyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 932

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 76/452 (16%), Positives = 149/452 (32%), Gaps = 28/452 (6%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE G     A      +     +       D+++   +     I T 
Sbjct: 328 WYQAHDLDLRIAIDESGTMTDVAG---SYSGLDSTEARESIVADLSESGALLDRREI-TH 383

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C    + +     +    Y       DE      E+    +  +   + N ++
Sbjct: 384 TVNVHERCGTNIEFL-----VKNQWYVKLLDKTDEYLAAGREMEWYPEKMFTRYK-NWIE 437

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            ++ +    R  +       +Y    E ++  E+ +  +  +       S      D  I
Sbjct: 438 GLQWDWAISRQRSSGIPFPVWYCDACEHVVIAEKESLPVDPLSDDPPVESCPACDHDTFI 497

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS-----KAKFWPADLHVIGKDILRFHAI 273
                   +   W  +    L   G+  N +        +  +P +L   G DI+ F   
Sbjct: 498 P----EDDVFDTWATSSLTPLINAGWDWNDNTETIEFGDSGLYPFNLRPQGHDIISFWLF 553

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    EK+SKS GNVI P EVI E  VDA RY+   
Sbjct: 554 HTVVKCYEHTGEVPFDSVMINGMVLDENREKMSKSKGNVIAPDEVITEYPVDAARYW-AA 612

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  Y + G+  R    L   + N       +     D    +       D  +L
Sbjct: 613 GSAVGDDLPYSEKGI--RAGEKLLRKLWNASKLVEDLTTDAPDPETMSHADLEAIDRWLL 670

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           +     +  + E  +++   +A   + S+      D Y +  K    + T  D A+   Y
Sbjct: 671 ARIDTEIARLTEKFESREFSKARDGLRSVFWHTFCDDYLEIAKHRIREGTTGDAAAA--Y 728

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 R+   L    +   + +++  ++V++
Sbjct: 729 TLTVAHRRFLKLFAPILAHASEELWRDMYVSN 760



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I +     +   H GH Y   + D +ARF R+ G DV F  G D++G    + A++  
Sbjct: 76  FSIDSPPPTVSGNLHWGHVYGFTLQDFVARFRRMRGSDVFFPFGYDDNGIASERLAEDEL 135

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                          T+    Q    F +    L IS D     +T       T ++ + 
Sbjct: 136 NVRHQEYERREFQQMTQEVCQQYEAEFTEKMQQLGISIDWNQTYQTISSDVKRTSQLSFI 195

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
            + ++G  Y+      +    E   +  E        +++
Sbjct: 196 DLYEQGREYRKRAPTIWCPECETAISQVETEDDEQPSHFH 235


>gi|331002911|ref|ZP_08326424.1| leucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413204|gb|EGG92578.1| leucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 804

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQVLKGNYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAKSTAENVANIKRQINEIAAIYDWDREVNTTDPAFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVDGK----CERCGTAVTKKNLRQWMLKITAYADRLLND 203

Query: 180 YESHPEFILPIERRNEVI 197
                      + +++ I
Sbjct: 204 LNKLDWPEKVKKMQSDWI 221



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 115/345 (33%), Gaps = 61/345 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 413 YKLRDWVFSRQRYWGEPIPIIHCPHCGNVPVPEEELPLRLPEVESYQPTGTGESPLAAID 472

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
           +  +    +   P       M  W    +++        + D          K+ P D++
Sbjct: 473 EWVNTTCPVCGGPAKRETNTMPQWA--GSSWYFLRYVDPHNDKELVSKEMADKYLPVDMY 530

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G+K+SKS GNV+ P
Sbjct: 531 IGGVEHAVLHLLYSRFYTKFLNDIGVVEFDEPFTKLFNQGMINGSDGQKMSKSKGNVVSP 590

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++ + G DALR + +       D  +D  G++                     + K Y
Sbjct: 591 DDLVRDYGCDALRLYELFVGPPELDADWDDRGIEG----------------VARFLNKFY 634

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
             ++       E+D  +L V + ++ +I +      ++  +A  +      ++  +  K 
Sbjct: 635 KLVMDNKDKNVEADRELLRVRANLISDIEQRFNAFSLNTVIAGFMEYN---NKLIELGK- 690

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               KT  D+         E ++   ILL  F P +  ++++ L 
Sbjct: 691 ----KTGVDK---------ETLKAFTILLAPFAPHIGEELWEELG 722


>gi|259502818|ref|ZP_05745720.1| leucine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169185|gb|EEW53680.1| leucine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 845

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 67  KDQKKFYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 126

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 127 YALKTGHNPKNFTNKNIDHFRDQIQALGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGL 186

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV     + +  +++AY D+L
Sbjct: 187 AYESEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMKQWVLKITAYADRL 242

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 243 IKDLDLVDWPESVKEMQRNWIGRSE 267



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 105/263 (39%), Gaps = 45/263 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFL------- 279
            A +++        +     A      +W P DL+V G +    H +Y   +        
Sbjct: 534 WAGSSWYWLRYTDPHNSKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLG 593

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      + 
Sbjct: 594 LVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDKYGADTLRLYEMFMGPLTES 653

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D++GL         +G    + R   +++ D + +      F   D  +  V ++ +
Sbjct: 654 VPWDEEGL---------HGSYKWIQRVWRLLMDDNNHLRDRVSNFN--DGKLTKVYNQTV 702

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E++     + A++Q++  V+E  +                    V  +  E ++  
Sbjct: 703 KKVTEDLGRMHFNTAISQLMVFVNEAYK--------------------VDDLPAEYMQGF 742

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++   +P +A +++    +++
Sbjct: 743 IKMISPIMPHVAEELWSQFGISE 765


>gi|115351374|ref|YP_773213.1| valyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|115281362|gb|ABI86879.1| valyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 955

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 92/399 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    +     +P         +++  ++D  +SR+   WG +IP
Sbjct: 372 PEGTFNPGKSITETSLDVVRNGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 429

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 430 AWYGENGEVFVARNEEEARAQAAAKGYAGALKRDEDVLDTWFSSALVPFSSLGWPNETP- 488

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 489 ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDAEGQKMSKSKG 548

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DPI++++                                       G DALR+ +  
Sbjct: 549 NTLDPIDIVDGIDLETLVAKRTTGLMNPKQAATIEKKTRKEFPDGIAAFGTDALRFTMAS 608

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------- 381
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 609 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGNDKPEVCGAGDCGPG 665

Query: 382 ---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ +D  I+S+  R   +I +   +         +   V +   D Y +  K  ++
Sbjct: 666 GYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWYLELAKV-QI 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   P++        + V+  +  L    +P +   ++ 
Sbjct: 725 QNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  Q     +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVTLFEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|322517529|ref|ZP_08070398.1| leucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322123789|gb|EFX95363.1| leucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 833

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++ Y ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITVYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 104/317 (32%), Gaps = 85/317 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E ++    + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIELMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               D+        V+  +    L+  F P LA +I+  + 
Sbjct: 710 VFVNAANK--------------EDKLY------VDYAKGFIQLIAPFAPHLAEEIWQTVA 749

Query: 479 VADENRC---FQSLDQR 492
              E+     + + D+ 
Sbjct: 750 ETGESISYVAWPTWDEG 766


>gi|169603023|ref|XP_001794933.1| hypothetical protein SNOG_04517 [Phaeosphaeria nodorum SN15]
 gi|160706311|gb|EAT88277.2| hypothetical protein SNOG_04517 [Phaeosphaeria nodorum SN15]
          Length = 1075

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 117/359 (32%), Gaps = 54/359 (15%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +    +  Y  + E        N+     ++  +    + + F       +  
Sbjct: 533 WCLSRQLWWGHQIPAYFVNIEGGTEDRSDNDTWVTGRTEEEAQKKAEQKFPGKKFTLERD 592

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +       K +P  +   G DIL F    +   +  L+ 
Sbjct: 593 EDVLDTWFSSGLWPFSTLGWPEKTV-DFEKLFPTSVLETGWDILFFWVARMIMMSLHLTG 651

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------- 317
            +P  +          +G K+SKSLGNVIDP++++                         
Sbjct: 652 KVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPVDIMDGITLEKLHDQLKIGNLDPKELKSA 711

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DALR  LV     G D  +D + +             N + ++
Sbjct: 712 EKYQKTSFPQGIPECGADALRMSLVGYTTGGGDISFDVNVIHG------YRRFCNKIYQA 765

Query: 366 VSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              +L  +  + P       G  +  +  IL   +   ++I +++  +    A       
Sbjct: 766 TKYVLGRFGDLTPRAKIAKSGKESLPERWILHKLTTSAKKINQHLDAREFSLATQVAYKY 825

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             E   D Y +  K     + + ++  +        I     ++  F+P L  +++  L
Sbjct: 826 FYEFLCDTYIENSKA-IFDEGSEEQKESAKQTLYTAIEGGLTMIHPFMPFLTEELWQRL 883



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 14/143 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-- 58
           +K      I         + H GHA    + DVL R+HR+ G   L+  G D  G     
Sbjct: 156 VKNAGHFVIPIPPPNVTGKLHCGHALATSLQDVLIRWHRMRGYTTLYLPGCDHAGIATPE 215

Query: 59  ---AKAAQNAGVTT------KVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
                A Q            K F+++ N    R M    D + + F  T +K        
Sbjct: 216 RRREDAGQARRQRPDTTLGAKKFIERDNGLEIRRMGGSFDWTREAF--TMDKNLSKAVTE 273

Query: 109 LWKKISDKGDIYKGCYSGWYSLR 131
            + K+ + G IY+      +  +
Sbjct: 274 SFVKMHEDGLIYRSNRLVNWCTQ 296


>gi|321310936|ref|YP_004193265.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802780|emb|CBY93426.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 711

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 4/185 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K YI     YP+    H+GH    +  D+ ARF ++ G  VL   G D  G    + A 
Sbjct: 32  KKFYILDMFPYPSGAGLHVGHVKGYLATDIWARFQKMKGYTVLHPMGWDAFGLPAEQYAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G +   F ++N  NFR     L +   +D  I T++  ++   + ++ ++   G    
Sbjct: 92  QTGNSPIDFTNRNIDNFRKQCKRLMLFYDWDREINTSDPEYYKHTQWIFSQMYKHGLAEL 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYY 180
                 +         D+E+  G DG+ Y+ + N  V   + + +  +++ Y D+LL   
Sbjct: 152 KDSLVNWCEELNTVLADEEIIVGDDGKRYSERGNYEVTSKKMKQWILKITEYADELLEDI 211

Query: 181 ESHPE 185
           +    
Sbjct: 212 QLLDW 216



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 107/325 (32%), Gaps = 51/325 (15%)

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
           Y S      P+    E I+  ++G   +  S    +W         +I Y+       Y 
Sbjct: 372 YSSKRSGFSPLINCKEWINVERAGKLYIRESSTMPNWAGSSWY---FIAYLLKKDDGGYH 428

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVF 291
                       +    P D++V G++    H +Y   +         +S   P      
Sbjct: 429 DLDSPEAKDILRRWL--PVDVYVGGQEHAAMHLLYARFWHKFLHKLGIVSTKEPFKALFN 486

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
               +   G K+SKS GN ++  E+I+  G D LR +            +++ G+K    
Sbjct: 487 QGMVLGSDGTKMSKSKGNYVNIDEMIDLYGADVLRLYEAFSGPTTLSFKWEESGMKA--- 543

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                     V    S + K          +  E D  +    ++++  +   +    ++
Sbjct: 544 ---MQKWLGKVFHFFSELEKY---------SVAEDDGEVNVAENKLISNVESAIPMMKVN 591

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
             +++++  ++E+                      +   + + +R    +L  + P  A 
Sbjct: 592 LGVSEMMIFLNEI--------------------QRLGKYSFKSLRSFLQILSLYAPATAE 631

Query: 472 KIF-DILFVADE--NRCFQSLDQRL 493
           +++ + L   D   N  +  L+  L
Sbjct: 632 ELWKEFLKGGDFLLNLKWPELNSNL 656


>gi|320011295|gb|ADW06145.1| isoleucyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 1049

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/412 (14%), Positives = 137/412 (33%), Gaps = 14/412 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +       +G++ +  +N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLQENEKTNWFPESVKNGRFGDWLNNNVDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         +D  L+   S  E      R    +   +  + +++ +    +  
Sbjct: 455 SRNRYWGTPLPIWRCEDDHLTCVGSRAELSELTGRDQSDLDPHRPFIDEITFTCSHENCR 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 LEAYRVPE-VIDAWYDSGSMPFAQWGYPYKNKEVFESRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++      +      P     T  D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSAADPAPADRTVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              ++ E+ + ++     RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LGTLVDEVTKALEAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           V+  +  L+    P +  +++  L V       +S+     P      + DP
Sbjct: 750 VVETVTRLMAPLTPFITERVWQDLIVPVAPDAPESVHLSSWP-TADPASIDP 800



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMQGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAYGIAEFNAKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I  KG + +      +  R     +D E+ +G +
Sbjct: 160 VDSVWWSLKEIFGKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|296109335|ref|YP_003616284.1| isoleucyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434149|gb|ADG13320.1| isoleucyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 1024

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 76/463 (16%), Positives = 165/463 (35%), Gaps = 45/463 (9%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    G  E   ++AK       +      + +        V D   D+ I  T +    
Sbjct: 324 VHTAPGHGEEDYEVAKKYNIPIYSPIDDQGRYTEGKWKGWFVKDA--DNEIIETLRNKGL 381

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                 +        ++      +   ++ +    E+ +    Q    +  P +W+E+  
Sbjct: 382 LVHA-GRIKHSYPHCWRCKTPLLFRATEQWFLKISEIKENIIDQAKTVEWIP-EWVEQR- 438

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK------------ 212
            +     Y        + +    LPI    +  ++V  G  +    R             
Sbjct: 439 -YINGVKYVGDWNISRQRYWGIPLPIWVCEKCKNYVVIGSVEELKERMINNIELDDLHKP 497

Query: 213 -------TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                    + G ++   P  ++ VW D+      + G              AD    G 
Sbjct: 498 TVDKVILRCECGGEMRRVPD-VLDVWFDSGLAPYASIGSKTLKK--------ADFITEGH 548

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D +   F++ +  + ++  ++P  K +     +   GEK+SKSLGN+++P +V+E+ G D
Sbjct: 549 DQVTKWFYSQHALSAIVFNDIPYKKCLMHGFTLDEHGEKMSKSLGNIVNPDDVVEKYGAD 608

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGA 382
            LR++L+      +D  +    ++  ++  L N + N    SV  M+L ++         
Sbjct: 609 ILRFYLLSANKVWEDLKFVWSEVEDVLS--LFNTLWNAYMFSVNYMVLDNFKPNEEYFKH 666

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKK 438
             + D+ I+S  + + ++  E+++    H     +   +       Y     ++ W+ +K
Sbjct: 667 LKDEDKWIISRVNSLAKKAIESLEIPHFHTYTWAIKDFILNDLSRWYIRLIRERTWK-EK 725

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + D+ S        V+ +L  ++    P +   I+  L   D
Sbjct: 726 EDIDKLSA-YQTLYYVLLKLCKIIAPVAPHIGEAIYQNLKTED 767



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 60/183 (32%), Gaps = 19/183 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
            Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I    +   
Sbjct: 39  FYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGFNVLDKAGWDMHGLPIEVKVEQEF 98

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                               K F  ++     +    L +   +D+      K + +   
Sbjct: 99  GIKSKKEIEKIGVDKFIEKCKEFALKHKEIMENQFKNLGVWLDWDNAYMPITKEYMEIGW 158

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
              K+  +KG + K     ++  R E    + EV       Y  + +   +  EE  Y  
Sbjct: 159 WTLKRAHEKGLLVKDLRVVYWCPRCETALAEHEVRGEYKEVYDPSVYVKFKLKEENAYLI 218

Query: 168 RLS 170
             +
Sbjct: 219 IWT 221


>gi|193794388|gb|ACF21406.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794414|gb|ACF21419.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794468|gb|ACF21446.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|300214279|gb|ADJ78695.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 805

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 139/411 (33%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +       ++ + GD+ K  Y+G     +  + N  +  +  D      + 
Sbjct: 342 HDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDFLNGMDKEEAIDAINNWLEE 401

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           N V           + F    Y  + +                     LP     +    
Sbjct: 402 NGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLYLPKATDIKPSGT 461

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+      +  D  K K W
Sbjct: 462 GESPLANLDDWVNVVDENGRKGRRETNTMPQWAGSSWYFLRYIDPHNNHEVADYEKLKEW 521

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P +L+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 522 LPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSK 581

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++E+ G D LR + +          + ++GL          G    ++R  +
Sbjct: 582 GNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGL---------GGAHKFINRVWN 632

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ + D +          D  +  + +  ++++ E+ +    + A++Q++  V+   + 
Sbjct: 633 LLIDENDNLRDRVTTINNHD--LDKIYNETVKKVTEDYEAMHFNTAISQLMVFVNNAYK- 689

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + +E +  L  LL   VP +  +++  L 
Sbjct: 690 -------------------ADSLPLEYVEGLVKLLSPVVPHITEELWSKLG 721



 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+L+  
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVIRKPMRQWVLKITAYADRLIDD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDDLDW 210


>gi|322373832|ref|ZP_08048367.1| leucine--tRNA ligase [Streptococcus sp. C150]
 gi|321277204|gb|EFX54274.1| leucine--tRNA ligase [Streptococcus sp. C150]
          Length = 833

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAKVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVAENNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|315635999|ref|ZP_07891259.1| valine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479720|gb|EFU70393.1| valine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 871

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 70/416 (16%), Positives = 145/416 (34%), Gaps = 56/416 (13%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           +DE +    E +    G  Y    N V+    + +F R       +   Y    +F  P 
Sbjct: 327 QDEGFIVKIEEHVHQVGHCYR-CKNIVEPYISKQWFVRKEVAAKSIEKTYAGEAKFH-PS 384

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKI----PDDPQY-------------------- 226
              N         L+D  +SR+   WG +I     DD  +                    
Sbjct: 385 HWLN-SYRAWMDELRDWCISRQ-LWWGHRIPVFYCDDCGHQWADKADVPHSCPKCASKNF 442

Query: 227 -----IMYVWIDALTNYLTTTGYLDNPDG-------SKAKFWPADLHVIGKDILRFH--A 272
                ++  W  +     +  G+ +N              F+P  L + G DI+ F    
Sbjct: 443 TQDPDVLDTWFSSALWAFSPLGWGNNGQMNGTFNESDLKDFYPNSLLITGFDIMFFWVAR 502

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +          LP  K ++ H  +  + G K+SKS GNVIDP++++EE   D +R+ L  
Sbjct: 503 MMMMGEHFRGELPF-KDIYMHALVRDEHGAKMSKSKGNVIDPLDMVEEHSADIIRFTLAY 561

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
               G+D       L++    +  N + N  S  +++ +  +  +       +     + 
Sbjct: 562 LAVQGRDIKLGAKNLEQ--FRNFTNKLYN-ASNFLALNVDTFPDL-KDIKITSYLGSYME 617

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           S  +  + E+R  +++   + A + +   V            W ++ +   + S V    
Sbjct: 618 SRLASAVDEVRGALESYKFNEAASVLYRFVW------TEFCDWGIEYSKASKDSIVE--L 669

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             + ++   ++  F+P +++ ++  L           +           +  + +F
Sbjct: 670 GAIFKETLKMVSPFMPFISDYLYHKLSGTSLEEGESLMIMNFPKDVKKDEKIEEMF 725



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 22/174 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +   I           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 34  EEGKNFAIMMPPPNVTGSLHIGHALTFTLQDIITRYKRMDGFKTLWQPGTDHAGIATQNV 93

Query: 62  AQ-------------------NAGVTTKVFV-DQNSRNFRDMADVLDISYDDFIRTTEKR 101
            +                         K F         R +      S + F  T ++ 
Sbjct: 94  VEKQLLAEGTTKEELGREKFLERVWKWKEFSGGTIVHQMRKLGVSPAWSRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             +  +  +  + ++G I +  Y   +   D A  + +  +    G++Y+  ++
Sbjct: 152 LKEAVKEAFVHLYNEGMIVQNNYMVNWCTHDGALSDIEVEHDEVQGKFYHMNYH 205


>gi|311105355|ref|YP_003978208.1| valyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760044|gb|ADP15493.1| valyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 964

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 74/520 (14%), Positives = 148/520 (28%), Gaps = 88/520 (16%)

Query: 36  RFHRLDGLDVLFTTGT-------DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD 88
           R+  L G +V             D+                  F D       D+  ++ 
Sbjct: 269 RYKHLVGKEVELPLCDRNIPIIADDFVDPEFGTGCVKITGAHDFNDYACAMRHDLPLIVI 328

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            + D  +     +          + +    +    Y              D      +  
Sbjct: 329 FTLDAHVNENGPKQFQGMERYQARKAVVAQLEAEGYLVKVEPHKMMQPKGDRTGVVLEPM 388

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +     +     EG      +  +  L           P        +   + ++D  
Sbjct: 389 LTDQWFVAMSKPAPEGTLNPGKSITEVALEVVADGRIQFYPDNWTTI-YNQWLNNIQDWC 447

Query: 209 LSRKTFDWGIKIP--------------------------------DDPQYIMYVWIDALT 236
           +SR+   WG +IP                                 DP  ++  W  +  
Sbjct: 448 ISRQ-LWWGHQIPAWYSEDGQIFVAHDEAEANAQARAAGVTGELKRDPD-VLDTWFSSGL 505

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
              TT G+ +N      ++ P+ + V G DI+ F    +      L+ ++P         
Sbjct: 506 VPFTTLGWPENTP-DLQRYLPSSVLVTGFDIIFFWVARMVMLTTHLTGHIPFKHVYVHGL 564

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
                G+K+SKS GN +DP+++I+                                    
Sbjct: 565 IRDADGQKMSKSKGNTLDPVDLIDGIDLDGLVAKRTYGLMNPKQAGAIEKATRRQYPDGI 624

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G DALR+ +      G++  +D    +     +  N + N  +R V M  + +D   
Sbjct: 625 PAFGTDALRFTMAAYATLGRNINFDLKRCEG--YRNFCNKLWN-ATRFVLMNTEGHDLTG 681

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
           P  G  +  D  I+S    +  ++     +         +   V +   D Y +  K   
Sbjct: 682 PETGETSFVDRWIVSQLQALEADVARGFADYRFDNIANSLYRYVWDEYCDWYLELAKVQI 741

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
              T   +  T     + V+  +  L    +P +  +++ 
Sbjct: 742 QTGTPAQQLGT-RRTLIRVLEGVLRLAHPIIPFITEELWQ 780



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 18/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E     I           H+GHA+   I D L R+ R+ G D +F  GTD  G      
Sbjct: 52  TESHPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYRRMLGDDTVFIPGTDHAGIATQIV 111

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +++     +    L  S D      T ++R  
Sbjct: 112 VERQLDAQKVSRHDLGREKFVEKVWEWKEKSGNAITEQVRRLGASADWPREYFTMDERMS 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR 131
                 + ++  +G IY+G     +  +
Sbjct: 172 RGVVETFVRLHKQGLIYRGKRLVNWDPK 199


>gi|49658911|emb|CAF28538.1| putative tRNA synthetase [Yersinia pseudotuberculosis]
          Length = 486

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 75/502 (14%), Positives = 165/502 (32%), Gaps = 62/502 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHA-YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   H+GH     + ADV+ R  +  G DVLF T +D++   + +  + 
Sbjct: 3   KFIVTATPPTPNGDLHLGHLSGPFLAADVMQRRLKQLGHDVLFVTYSDDYQSYLPRKTKA 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
                  +     +  +   ++++I +D F++  +   +      + K+   G      +
Sbjct: 63  LHRQPFAYARLMRQAMQLSLELVNIRFDTFMQAADTPVYQHSGEHYAKL-IAGQTELKEH 121

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
             +Y      Y  +       +    ++  +  +         +++A             
Sbjct: 122 KTFYCATCNLYGYEGFGRTQCNWCGTSSDTSQCEHCARVPDIEKITAMTCMSCQGAMQPV 181

Query: 185 EFILPIERRNEVISFVKSGLKDLSL------------SRKTFDW--------GIKIPDDP 224
           +    I    +    VK+ L+   +            S ++  W        G+ +    
Sbjct: 182 QVKQHIWTIGQNYPAVKAALQQRPMRPCLTGYLDDVLSNESEQWSLTRPGDAGLPVAALD 241

Query: 225 QYIMYVWIDALTNYLTTTGYL---DNPDGSKAKFWPAD---LHVIGKDILRFHAIYWPAF 278
            Y ++ W   L+ Y +            G  A++W  D   +H++G D    HA+ + + 
Sbjct: 242 NYPLHTWFLGLSGYRSCVESYLATHPERGEFAEWWAPDTELVHLLGFDCSYSHAVGYSSL 301

Query: 279 LLSAN-LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           LL+    P P    ++ F+   GE  S S G+ +   ++  +   DA+R F         
Sbjct: 302 LLADQTGPCPGTFITNRFLKLDGEDFSTSRGHAVWIKDLTGQYPSDAIRLFSALTAPEIA 361

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + ++  +   +      +                  +   G    +++ +       
Sbjct: 362 VSNFSREQFQHWYHQIFLPLVTQA-------------EQVIDSGITLTTEQWLRLRSHSA 408

Query: 398 LQEIREN--MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + ++   ++   I      V+     +                  ++  VL V  E  
Sbjct: 409 CLDWQQAASLEAFSIAGMARAVLDFSEFM------------------QSDDVLSVAPEAW 450

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           + LA L     P LAN I  +L
Sbjct: 451 QNLAELFLPLCPDLANTILSVL 472


>gi|56416673|ref|YP_153747.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821293|sp|Q5PB38|SYL_ANAMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56387905|gb|AAV86492.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 829

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  GL VL   G D  G     AA + GV
Sbjct: 34  YVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVLHPIGWDAFGLPAENAALSYGV 93

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
              V+ ++N  + R     + ISY  D  + T ++ ++   +  +     +G  Y+    
Sbjct: 94  NPAVWTERNIESMRKQLKSIGISYNWDRELATCKEDYYKHEQAFFLDFLQQGLAYRKESW 153

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D     +++V  G            ++  +   +F +++ + D LL   ++   
Sbjct: 154 VNWDPVDNTVLANEQVVDG----RGWRSGAKIERRKLSQWFLKITDFADSLLDGLKTLDG 209

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 210 WPEKVKLMQERWIGKTEG 227



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 142/442 (32%), Gaps = 74/442 (16%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHNPVQW 159
           D  ++++     + D+ K  YSG  + R+  + N   V    +              V  
Sbjct: 346 DIYQVVFPDDGVQYDLQKEAYSGDGTYRNSEFLNGLRVDAARNAMIQKLESMGGCRRVTN 405

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--WG 217
                +      Y    +         I+P++R++  IS  +        +       W 
Sbjct: 406 YRLHDWGISRQRYWGCPIPVVHCEKCGIVPVDRQDLPISLPEEVDFSRGGNPLDHHPTWK 465

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------KFWPADLHVIGKDILR 269
                  Q       D    +  ++ Y       +         K  P D ++ G +   
Sbjct: 466 HVQCPKCQSSAQRETDTFDTFFESSWYFAAFCSEQGGINAADCNKLLPVDYYIGGVEHAV 525

Query: 270 FHAIYWP--------AFLLSANLPLPKKVFSHGFI------------------------- 296
            H +Y             L+   P    +                               
Sbjct: 526 LHLLYARFFCRALKKCGHLAVEEPFRNLITQGMVCHSVYRDAAGNYLFPEDAQRMIRDGE 585

Query: 297 ---LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                K EK+SKS  NV+DP  +I++ G D +R F++ +    +D  +   G++      
Sbjct: 586 AVQRGKVEKMSKSKKNVVDPSHIIKKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWR-- 643

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               +  L   + S I  D+D            D   LS   ++L+ +  +M++  ++ A
Sbjct: 644 YLERLWRLFEDNSS-IGADFDT-----ADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 697

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           +A+   + + V   F+  K                 V  E +  L  +++ F+P +A K+
Sbjct: 698 VAKFREMSNTV---FEMVK-----------CGVSQQVINESVCILLRVMEPFIPHIAEKL 743

Query: 474 FDILFVADE--NRCFQSLDQRL 493
           ++ +       NR + S  + L
Sbjct: 744 WERIGGEGMLCNRQWPSAREDL 765


>gi|189203223|ref|XP_001937947.1| valyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985046|gb|EDU50534.1| valyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1094

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 120/357 (33%), Gaps = 49/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +    +  Y    E        ++     ++  +  + + K F          
Sbjct: 551 WCLSRQLWWGHQVPAYFIELEGKDNARSEDQFWVTGRTEEEARAKAEKKFPGATFTLSRD 610

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +       K +P  +   G DIL F    + + +  L+ 
Sbjct: 611 EDVLDTWFSSGLWPFSTLGWPNQTA-DFEKLFPTSVLETGWDILFFWVARMIFLSLYLTG 669

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P  K+V+ H  I   +G K+SKSLGNV+DP++++                        
Sbjct: 670 KVPF-KEVYCHSLIRDSEGRKMSKSLGNVVDPVDIMDGITLQKLHDQLRAGNLDPKELTK 728

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR  LV     G D  +D + +         N I      
Sbjct: 729 AEKYQKTAFPQGIPECGADALRMALVGYTTGGGDISFDVNVI--HGYRRFCNKIYQATKY 786

Query: 365 SVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +  +   +     I   G  +  +  IL   +   ++I ++++ +    A         
Sbjct: 787 VIGRLGDSFTPREKIAKTGVESLPERYILHQLNTAAKKINDHLEAREFSLATQVAYKYFY 846

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V   D Y +  K     + + ++  +        I     ++  F+P L  +++  L
Sbjct: 847 VYLCDTYIENSKA-IFDEGSEEQKESAKQTLYTAIEGGLTMIHPFMPFLTEELWQRL 902



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K      I         + H GHA    + DVL R+HR+ G   L+  G D  G     
Sbjct: 165 VKSPGHFVIPIPPPNVTGKLHCGHALATSLQDVLIRWHRMKGYTTLYLPGCDHAGIATQS 224

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                      T  + ++  ++       +  S+D      T ++ 
Sbjct: 225 VVEKMLKRRENKTRYDLGRQKFLERTMEWKEEYHQHLTHTLRRMGGSFDWTREAFTMDEN 284

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ + G IY+      + 
Sbjct: 285 LSKAVTETFVRLHEDGLIYRSNRLVNWC 312


>gi|55379286|ref|YP_137136.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232011|gb|AAV47430.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 892

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 70/215 (32%), Gaps = 19/215 (8%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  AR+ R+ G +VL   G D  G     AA     
Sbjct: 35  YVLGMFPYTSGSLHMGHIRNYAITDAYARYRRMAGDEVLHPMGWDAFGLPAENAAYKRDT 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +        +D    +   YD    I T +  ++   + L+ +  D+G +  G  +
Sbjct: 95  DPESWTRTCIDQMKDDLREMGFGYDWSREITTCDPDYYQWNQWLFTQFYDEGLVDYGAAT 154

Query: 126 GWYSLRDEAYYNDDEVY-----------------KGADGQYYNAQHNPVQWMEEEGYFFR 168
             +    E    D +V                      G         V+  + + +FF 
Sbjct: 155 VNWCPDCETVLADAQVETPPEADEGETTAGTGHSHTHGGGVCWRCGTDVEQRDLDQWFFA 214

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           ++ Y ++L    +    +   +          + G
Sbjct: 215 ITDYAEELYHGLDDLEGWPDGVRDSQRNWIGRQEG 249



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 66/353 (18%), Positives = 115/353 (32%), Gaps = 50/353 (14%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+   ++ G+           L  Y       L      +  S    G   +
Sbjct: 435 QRYWGTPIPIVHCDDCGHVPVPEEDLPVELPDYVQTTGNPLDAAEEWKQTSCPDCGADAV 494

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
             +            D              YL+        D   A  W P D++V G++
Sbjct: 495 RET------------DTMDTFVDSSWYFLRYLSPHFADAPFDQKTADEWLPVDVYVGGEE 542

Query: 267 ILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
               H +Y   F        L       +++ + G +LH GEK+SKS GN I P E    
Sbjct: 543 HAVLHLLYIRFFTRALSDIGLLDREEPVERLINQGTVLHSGEKMSKSKGNDIAPHE---- 598

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G +  R F++      +D  +    +      D    +  LV+        +Y     T
Sbjct: 599 YGAETTRLFVLSAAHPSQDFEWTVKDVSTAY--DFQQTLYRLVT--------EYTDRTET 648

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
               T+ D  +     R +  + E       HR + ++      + RY    +P++   +
Sbjct: 649 RTESTDHDTYLEREIDRTIAAVTEEYDRFRFHRVIGEIQRFARLLGRYAGYDRPYQFAYS 708

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL---FVADENRCFQSL 489
                          +R LA L+    P LA +++ +L    +  E+R  + L
Sbjct: 709 -------------RGLRVLAGLVAPIAPFLAEEMWQLLDEDGLVAESRWPEPL 748


>gi|239931817|ref|ZP_04688770.1| isoleucyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440186|ref|ZP_06579576.1| isoleucyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343081|gb|EFE70037.1| isoleucyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 1058

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 124/387 (32%), Gaps = 13/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G+Y +  +N + W  
Sbjct: 406 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLAENENTNWFPDTVKHGRYGDWLNNNIDWAL 465

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++          D  L+   S  E           +   +  + +++ +      G
Sbjct: 466 SRNRYWGTPLPIWRCADDHLTVVGSRAELSELTGTDQSGLDPHRPYIDEVTFACPQDGCG 525

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 526 QEAARVPE-VIDAWYDSGSMPFAQWGYPYKNKELFEARYPAQFICEAIDQTRGWFYTLMA 584

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 585 IGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 644

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++     ++      P P      D  +LS 
Sbjct: 645 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSNWAPSGADPAPADRPLLDRWLLSE 704

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++   +      RA   + + V ++  ++  +      + +     T      E
Sbjct: 705 LHALTDQVTRALDGYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 760

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V+  +  L+    P +  +++  L V 
Sbjct: 761 VVETVTKLMAPLTPFITERVWQDLVVP 787



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFSGKQDIEAYGIAEFNARCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 160 VDSVWWSLKEIFNKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|193794502|gb|ACF21463.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDWALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQSRLATVLHTLAQVVTDL 166


>gi|171319520|ref|ZP_02908621.1| valyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095260|gb|EDT40250.1| valyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 955

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 92/399 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    +     +P         +++  ++D  +SR+   WG +IP
Sbjct: 372 PEGTFNPGKSITETSLDVVRNGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 429

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 430 AWYGENGEVFVARNEEEARAQAAAKGYAGALKRDEDVLDTWFSSALVPFSSLGWPNETP- 488

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 489 ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDAEGQKMSKSKG 548

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DPI++++                                       G DALR+ +  
Sbjct: 549 NTLDPIDIVDGIDLETLVAKRTTGLMNPKQAATIEKKTRKEFPDGIAAFGTDALRFTMAS 608

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------- 381
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 609 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGSDKPEVCGAGDCGPG 665

Query: 382 ---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ +D  I+S+  R   +I +   +         +   V +   D Y +  K  ++
Sbjct: 666 GYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWYLELAKV-QI 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   P++        + V+  +  L    +P +   ++ 
Sbjct: 725 QNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  Q     +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQQSGSAITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVTLFEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|168217202|ref|ZP_02642827.1| leucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380741|gb|EDT78220.1| leucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 816

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDGLDWPEKTVSMQKHWI 222



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 111/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTEAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + + +L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWSLLGNSYSIFNEAWPKFD 747


>gi|213401899|ref|XP_002171722.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999769|gb|EEB05429.1| valyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 982

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 68/414 (16%), Positives = 136/414 (32%), Gaps = 91/414 (21%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                + ++ + +  ++              ++    I P   R E I +++  ++D  +
Sbjct: 460 CGKTGDIIEPVMKPQWWVNQKDMAAAAADAVKNGEIEIFPDVSRREFIRWME-NIQDWCI 518

Query: 210 SRKTFDWGIKIP--------------------------------------------DDPQ 225
           SR+   WG +IP                                            +  +
Sbjct: 519 SRQ-LWWGHRIPAYFVKLADGTSGSREDDKYWVTGRTLEEAEKKAKAAFPGKEFTLEQDE 577

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            ++  W  +     +T G+       K  F+P  L   G DIL F    +      L+  
Sbjct: 578 DVLDTWFSSGLWPFSTLGWPLETLDLK-NFYPGTLMETGWDILFFWIARMVMLGIKLTGQ 636

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG--- 339
           +P  K+VF H  +   +G K+SKSLGNV+DPI+VIE + ++AL   L+      ++    
Sbjct: 637 IPF-KRVFCHALVRDAQGRKMSKSLGNVVDPIDVIEGITLEALHQKLMSGNLDPREVEKA 695

Query: 340 --------------------------------FYDKDGLKKRVNADLANGIGNLVSRSVS 367
                                             + D L+        N + N    ++ 
Sbjct: 696 KKGQKISYPKGIPQCGTDALRFTLCSLTTGGRDLNLDILRVEGYRKFCNKLYNATKFALG 755

Query: 368 MILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
            +  D+         G  +  ++ I    +     + + M+     +A + V        
Sbjct: 756 RLGADFVPKKDASPSGKESLVEKWIFHKLNIAAASMNKYMEEMNFLQATSAVYQFWLYEL 815

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D Y +  K + L    P++  +       V+     L+  F+P +  +++  L
Sbjct: 816 CDVYIENSK-YLLSDGTPEQQESAKQTLYTVLEAGLCLMHPFMPYVTEEMWQRL 868



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 23/250 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+  K  I++         HIGHA  + I D LAR++R+ G  VLF  G D  G     
Sbjct: 129 IKKAGKFVITSPPPNVTGALHIGHALTIAIQDSLARWNRMKGKTVLFLGGFDHAGLSTQS 188

Query: 61  AAQNAGVTTKV-----------------FVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +      K                  + +      +     L  S+D      T ++ 
Sbjct: 189 VVEKKLWQEKKQTRHDYSREDFLKIVWAWKEDYHNRIKTQMSRLGGSFDWTREAFTMDEN 248

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK----GADGQYYNAQHNPV 157
                R  + ++ ++G IY+      +    +   ++ EV      G           PV
Sbjct: 249 LSRAVRETFVRLHEEGIIYRANRLVNWCTALQTTLSNLEVENVDVPGRTMLKVPGYQKPV 308

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           +        +++    ++++         +                L    +     D  
Sbjct: 309 EVGVLTSIAYKIVDSDERIIIATTRPETLLGDTAVAVHPKDPRYQHLHGKFVQHPFVDRK 368

Query: 218 IKIPDDPQYI 227
           I I  D   +
Sbjct: 369 IPIICDDIIV 378


>gi|58263416|ref|XP_569118.1| valine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134108404|ref|XP_777153.1| hypothetical protein CNBB3840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259838|gb|EAL22506.1| hypothetical protein CNBB3840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223768|gb|AAW41811.1| valine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1109

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 123/385 (31%), Gaps = 57/385 (14%)

Query: 155 NPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           + V+WME  + +      +       +    E   P    ++     ++  +    ++  
Sbjct: 541 DWVRWMENMQDWCISRQLWWGHRCPAWLLKFEGESPDTSDDKNWIVARTEEEAQEKAKAR 600

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            +    I +    ++  W  +     +T G+ +        F+P  +   G DIL F   
Sbjct: 601 ANGKNFILEQDDDVLDTWFSSGLWPFSTMGWPNKTP-DMEHFYPNSILETGWDILFFWVA 659

Query: 274 YWPAF-LLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI-------------- 317
               F     N+   K+V+ H  +    G K+SKSLGNVIDP++VI              
Sbjct: 660 RMVFFGNTLTNVMPFKEVYCHPMVRDAYGRKMSKSLGNVIDPLDVITGQKLEKLHNDLRM 719

Query: 318 -----------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                                   + G DALR+ L    + G+D   D   ++       
Sbjct: 720 GNLPEKEILKAEEGQKKLYPKGIPQCGTDALRFTLCNYTSGGRDINMDIGRVEG--YRKF 777

Query: 355 ANGIGNLVSRS-VSMILKDY-----------DGMIPTPGAFTESDESILSVCSRVLQEIR 402
            N + N        M L D            +      G     ++ +    +     I 
Sbjct: 778 CNKLWNATKFCLFRMDLVDLQGVRQTSAFVPNASHLPTGKEGLVEKWLFHKLNLASAAIS 837

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++N+    A             D Y +A KP     ++P    +        +     
Sbjct: 838 DALENRDFSEASTVAYQYFLNDLCDVYIEATKPIFEANSDPAAKLSAQNTLYTCLEAGLK 897

Query: 461 LLQAFVPKLANKIFDILFVADENRC 485
           LL  F+P +   ++  L   + + C
Sbjct: 898 LLHPFMPYVTEDLWQRLPRREGDSC 922



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 19/146 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I+          HIGHA  + + D L R+ R+ G  VL+  G D  G       
Sbjct: 165 DKGTFCITFPPPNVTGNLHIGHALTVSLQDALIRWKRMQGQTVLYLPGYDHAGIATQAVV 224

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD-DFIR-TTEKRHH 103
           +   + T                   + DQ      +    L  S+D D +  T +    
Sbjct: 225 EQRLMKTEGHSRHHYGREKFLEKVWEWKDQYQGKITNQMTRLGGSFDWDKVAFTMDDNLS 284

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYS 129
              R  + ++ +KG +Y+      + 
Sbjct: 285 TAVREAFVQMHEKGLLYRANRLVNWC 310


>gi|327475194|gb|AEA77192.1| leucyl-tRNA synthetase [Exiguobacterium sp. EPVM]
          Length = 801

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++E  Y+     YP+    H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 31  DKECFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGFNVLHPMGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F ++N   FR     L  SY  D  I TT+ +++   + ++ ++ D+G  
Sbjct: 91  ALDTGNDPREFTERNIGTFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLHDRGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++EV  G         ++PV  +  + +  R++ Y ++LL  
Sbjct: 151 YVDEVAVNWCPVLGTVLANEEVIDG----LSERGNHPVYRVPMKQWVLRITEYAERLLDD 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 207 LEGLDWPESVKEMQRNWI 224



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 50/282 (17%)

Query: 224 PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   Y+            D  K K W P DL++ G +    H +Y   + 
Sbjct: 488 ETNTMPQWAGSCWYYIRFIDPHNEDMIADPEKLKRWLPVDLYIGGTEHAVLHLLYARFWH 547

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  K       +    EK+SKS GNV++P ++I+  G D LR + + 
Sbjct: 548 KVLYDIGIVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDDIIKSHGADTLRLYEMF 607

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    +  +GL         +G    + R   +    +D       A T       
Sbjct: 608 MGPLDAAIAWSTNGL---------DGARRFLDRVWRL----FDQTALQDVAPTA---DFE 651

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ +    + A++Q++  ++E  +      P    K             
Sbjct: 652 RTYHQTVKKVTEDYEALRFNTAISQLMVFINEAYK--QDTLP----KQE----------- 694

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQ 491
              +     +L    P LA ++++ L + ++     + S D+
Sbjct: 695 ---MVNFIKMLAPVAPHLAEELWERLGMTEDLTYAAWPSFDE 733


>gi|27262334|gb|AAN87448.1| Isoleucyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 754

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 85/427 (19%), Positives = 146/427 (34%), Gaps = 51/427 (11%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYN-- 151
           + TT+        +  + +  K D  K  Y   +  +    +   ++ +   DG      
Sbjct: 195 MSTTQANPAVIEELKNRGLLIKADKIKHQYPHCWRCKHPILFRATEQWFASIDGFRKEAL 254

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP----------IERRNEVISFVK 201
              + V+W+   G     +   D+          + +P              N+      
Sbjct: 255 DAIDQVRWIPAWGRDRIHNMVADRGDWCISRQRTWGVPIPIFYCADCGETIINDETISHI 314

Query: 202 SGLKDLSLSRKTF---------------DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            GL     S   F                 G +       IM VW D+ +++        
Sbjct: 315 QGLFKEHGSDVWFAKEADELVPPGLACGKCGHQHFRKETDIMDVWFDSGSSHQAVLE--- 371

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +   +PADL++ G D     F++    A       P    +     +  +G K+S
Sbjct: 372 ---TRENLHFPADLYLEGSDQHRGWFNSSLSTAVATKGTAPYKAVLTHGFLVDEQGRKMS 428

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN +DP+ VI+++G D LR ++   +    D     + L  R  AD    I N    
Sbjct: 429 KSLGNGVDPLAVIKDMGADILRLWVA-SVDYRNDVAVSPNIL--RQIADGYRKIRNTFRY 485

Query: 365 SVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +  I  D+D    T      TE D   +    +++Q +    +N   H     + +   
Sbjct: 486 FLGNI-ADFDPKADTVPFEQMTELDRWAMMALHKLIQRVTTACRNYEFHVVYHAIHNFCA 544

Query: 421 VSEVDRYFDAQKPWELK--KTNPDR--ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V     Y D  K         +P+R  A TVLY+T      L  +L  F+   A +++  
Sbjct: 545 VDMSALYLDIIKDRLYASPAKSPERRSAQTVLYLTA---DALVRMLAPFISFTAEEVWGY 601

Query: 477 LFVADEN 483
           L  A E 
Sbjct: 602 LPGAKEQ 608


>gi|329954923|ref|ZP_08295940.1| isoleucine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328527027|gb|EGF54038.1| isoleucine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 1162

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 101/269 (37%), Gaps = 12/269 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+ +       Y             +PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGSMPYAQIHYPFENKELLDSHQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK LGN +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSISYKAVISNGLVLDKNGNKMSKRLGNAVDPFSTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D DG+++                ++   +  ++            E D  I+S
Sbjct: 743 PWDNLKFDVDGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWIIS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++++          +A   +   V++   + Y   + ++ W    T  D+ S   
Sbjct: 803 VLNTLVKDVDNCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-F 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +  +A L+    P  A+ ++  L
Sbjct: 861 QTLYTCLETVAKLMAPIAPFYADMLYSDL 889



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 61/209 (29%), Gaps = 27/209 (12%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFFEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKV---------------------FVDQNSRNFRDMADVLDISYDDFIR 96
           +    + A   TK                      F  +       M   +D+       
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMQNPYI-- 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + R+ +T   L K++  KG +YKG     YS       +  E+ +             
Sbjct: 152 TYDNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTV 210

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
           V   + +     ++ +       + + P 
Sbjct: 211 VGQFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|193794406|gb|ACF21415.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFVSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|168213858|ref|ZP_02639483.1| leucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714638|gb|EDT26820.1| leucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 816

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDGLDWPEKTVSMQKHWI 222



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 111/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTEAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + + +L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWSLLGNSYSIFNEAWPKFD 747


>gi|169344415|ref|ZP_02865384.1| leucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297335|gb|EDS79444.1| leucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 816

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDGLDWPEKTVSMQKHWI 222



 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 111/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTDAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + + +L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWSLLGNSYSIFNEAWPKFD 747


>gi|193794390|gb|ACF21407.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQV-PEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|168204680|ref|ZP_02630685.1| leucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|182624131|ref|ZP_02951918.1| leucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|170663753|gb|EDT16436.1| leucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|177910747|gb|EDT73107.1| leucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 816

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDGLDWPEKTVSMQKHWI 222



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 111/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTEAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + + +L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWSLLGNSYSIFNEAWPKFD 747


>gi|326790419|ref|YP_004308240.1| leucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541183|gb|ADZ83042.1| leucyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 798

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++  Y      YP+    H+GH    +++DV +R+  L    VL   G D  G     
Sbjct: 26  EGKKPYYCLDMFPYPSGNGLHVGHWRGYVLSDVWSRYKILQNHYVLHPMGWDAFGLPAEN 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    V   +   +N  NF+     +     +D  + TT+   +   + ++ K+ + G 
Sbjct: 86  YAIQKKVHPAIATAENVANFKRQLHDISAVYDWDKEVNTTDPEFYKWTQWIFLKMFENGL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    ++EV +G      +   + V       +  +++ Y ++LL+
Sbjct: 146 AYEKEMPINWCPSCKTGLANEEVKEG----CCDRCGSTVTKKNLRQWMLKITNYAERLLN 201

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + + + I
Sbjct: 202 DLDGLDWPEKVKKMQADWI 220



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 96/258 (37%), Gaps = 44/258 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y       +       K W P D++V G +    H +Y   +         +   
Sbjct: 498 WYFLRYPNPHNDEELISKEDMKKWLPVDMYVGGIEHAVLHLLYARFYTKFLFDIGVVDFE 557

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K++F+ G +   G K+SKS GNV+ P E++E+ G D+LR + +       D  +D 
Sbjct: 558 EPF-KRLFNQGMVTKAGAKMSKSKGNVVSPDELVEKYGCDSLRMYELFIGPPELDSEWDD 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++        N +  LV                         + +  +  +++++I  
Sbjct: 617 RGIEGVYR--FLNKVWKLV----------------DENTAVAETKDMERIRHKLIRDITV 658

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            M+N  ++  ++  +      +   D QK                 +  E ++ L ILL 
Sbjct: 659 RMENFNLNTVVSGFMQY---TNELLDLQK-------------KQGGLANETLKALVILLA 702

Query: 464 AFVPKLANKIFDILFVAD 481
            FVP ++ +++  +  + 
Sbjct: 703 PFVPHISEELWAKVGGSG 720


>gi|281202051|gb|EFA76256.1| valyl tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 1078

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 127/418 (30%), Gaps = 57/418 (13%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM----EEEGYFF 167
             S   DI +      + ++ +           +         + V W       + +  
Sbjct: 477 FCSRSKDIVEPLIKPQWYVKCDGMAAKAIEAVKSGELKIIPSTHEVTWFRWLENIKDWCI 536

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD---WGIKIPDDP 224
               +    +  Y      ++             +  + L  +   F      I++  D 
Sbjct: 537 SRQLWWGHRIPAYLVRVRGVVEDPYSTSQWVVGNNQEEALESAAAKFKVPKEDIQLEQDH 596

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     +T G+ +       +F+P  L   G DIL F    +      L+ 
Sbjct: 597 D-VLDTWFSSGLFPFSTLGWPEQTK-DFEQFFPTSLLETGLDILFFWVARMVMMGQQLTG 654

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------------ 318
            LP  +           G K+SKSLGNVIDP++VI                         
Sbjct: 655 KLPFNQIFLHAMVRDSHGRKMSKSLGNVIDPLDVIRGITLKSLQDNLKAGNLDPVEYEKA 714

Query: 319 -------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DA+R+ L    + G+D   D   +         N I N  +R 
Sbjct: 715 SLGLKQDYPEGISECGTDAMRFALCAYTSQGRDINLDILRVVG--YRHFCNKIWN-ATRF 771

Query: 366 VSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             M L DY  +   P          +  IL+  +R +Q+  E        +    + +  
Sbjct: 772 AMMKLGDYKPIDFNPQELVKDTNAVNLWILNAANRAIQQCEEGFAAYDFAQVTTAIYNFW 831

Query: 422 --SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D Y +  KP   +  +              I     LL  F+P L+ +++  +
Sbjct: 832 LHDLCDFYLETTKPIFAEGDSSPATQKTKDTLYTCIDIGLKLLHPFMPYLSEELYQSI 889



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +K  +           H+GHA  M I D + R+ R+ G   L+  GTD  G      
Sbjct: 147 QKDKKFTMVIPPPNVTGSLHLGHALTMAIQDSITRYRRMKGEVCLWIPGTDHAGIATQVV 206

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                         + ++     +    ++  S D      T +++ 
Sbjct: 207 VEKKLQRERNVSRHDLGREGFINEVWNWKNEYGSRIQGQLRIIGSSLDWSREAFTMDEKR 266

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++ D G I++      +S   +   +D EV  
Sbjct: 267 CKAVNTAFIRMFDDGLIFRSTRLVNWSCALKTAISDIEVDF 307


>gi|241859197|ref|XP_002416187.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215510401|gb|EEC19854.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 755

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 12/214 (5%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K+Y+ +   YP+ Q H+GH     I+D  AR +++ G  V+   G D  G     AA  
Sbjct: 4   KKMYVLSMFPYPSGQLHLGHVRVYTISDTYARLYKMLGKHVIHPMGWDSFGLPAENAAVE 63

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                + + ++N  + +     ++ ++D    I T +  ++   + L+ K+ +KG +Y+ 
Sbjct: 64  RNEDPRNWTEKNIDSMKKQLKDMNFNFDWEREISTCDPNYYKWTQYLFLKLYEKGLVYRK 123

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D     D++V   A+G+ + +    V+      +F R +     LL   E 
Sbjct: 124 NSVVHWDPVDRTVLADEQV--DAEGRSWRSGAK-VEKKTLRQWFVRTTFLSKDLLLGLED 180

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                 P  R  + +  ++ G      +   F W
Sbjct: 181 ------PTLRDWDEVLAMQRGWIG-ECTGFAFSW 207



 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 16/194 (8%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   +    EK+SKS  N + P +++ + G+D  R F++   +      +  +    R  
Sbjct: 552 TGKPVSVDWEKMSKSKHNGVRPEDIVSKYGIDTTRLFILSAYSPTSRYKWPSETF--RGV 609

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                 +   V        +  +     P  F   +       +  ++ +  +   +   
Sbjct: 610 VSWQERLWLTVHDFRMSAERSLEEAQAQPD-FAARERYYYEGRNYTVKNV--SYGRRDDG 666

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLA 470
                   L S+V  +    + +   K    R   V     E  +  L ++L    P  A
Sbjct: 667 H---SSFRLSSQV--FLQRARVFAQYKN---RGEVVFGRQFERALAALIVMLGPLAPHFA 718

Query: 471 NKIFDILFVADENR 484
           ++++     AD  R
Sbjct: 719 SEMWA--GFADAAR 730


>gi|83319332|ref|YP_424624.1| leucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123740039|sp|Q2SRI9|SYL_MYCCT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83283218|gb|ABC01150.1| leucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 804

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 3/187 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
              +K Y+     YP+    H+GH       DV +RF R+ G DVL   G D  G    +
Sbjct: 27  SNHKKAYVLDMFPYPSGAGLHVGHIKGYTATDVYSRFKRMQGYDVLHPIGWDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   + F  +N  NF+     +  SYD    I T +  ++   + ++K++  KG 
Sbjct: 87  YALKTGNDPRDFTLKNIENFKAQLVKMGFSYDYDKEINTADPNYYKVTQWIFKELYKKGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                    +         +DE+ +            PV   +   +  +++ Y DKLL 
Sbjct: 147 AENRNIDVNWCQELGTVLANDEIIEKDGLMVSERGEYPVVKKKMRQWVLKITDYADKLLK 206

Query: 179 YYESHPE 185
             ++   
Sbjct: 207 GLDNLDW 213



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 96/247 (38%), Gaps = 44/247 (17%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLL--------SANLPLPKKVFSHGFILHKGEKIS 304
            K+ P DL++ G++    H +Y   +            + P  +       +     K+S
Sbjct: 523 EKWLPVDLYIGGQEHAVGHLLYSRFWTHFLYDLGLLPTSEPFQRLFNQGMILGPDNRKMS 582

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P +VI+  G DALR + +          +  DGL               ++R
Sbjct: 583 KSWGNVINPDDVIDTHGADALRLYEMFMGPLDASLPWSFDGLDAS---------LKWLNR 633

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              MI K              ++  +  V + V++++ + +     + A++Q++ LV+ +
Sbjct: 634 CYRMINK--------IEFSNTNNHKLDYVYNDVVKKVTQMITELKFNTAISQLMVLVNAI 685

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            +               +  STV    +E       +L  F P LA ++++ L   + + 
Sbjct: 686 YK---------------EELSTVYKPYIEGF---VKMLSLFSPHLAEELWEKLG-NNSSV 726

Query: 485 CFQSLDQ 491
             Q+  +
Sbjct: 727 TLQAWPE 733


>gi|18309652|ref|NP_561586.1| leucyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|32171575|sp|Q8XML8|SYL_CLOPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|18144329|dbj|BAB80376.1| leucine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 816

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDGLDWPEKTVSMQKHWI 222



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 112/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTEAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + +++L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWNLLGNSYSIFNEAWPKFD 747


>gi|238795021|ref|ZP_04638616.1| Isoleucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238725672|gb|EEQ17231.1| Isoleucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 938

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 118/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  E +    + L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSTELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDPADILGADAADYTKVPDTLDVWFDSGSTHSSVVD----VRPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI E  +N   H  + +++   S      Y
Sbjct: 668 GFDPALHQVKPEEMVVVDRWAVGRAQAAQAEIMEAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNQL 778



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRSLSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|320537970|ref|ZP_08037876.1| leucyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145176|gb|EFW36886.1| leucyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 861

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++ Y+     YP+ +  H+GH       D+  R+ R++G +VL   G D  G      
Sbjct: 40  KDKRAYVLDMFPYPSGEGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGFDSFGLPAENY 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   KV  ++N  NFR        SY  D  I T+++ ++   + ++ ++  +G  
Sbjct: 100 AIKTGTHPKVTTNKNIDNFRRQIKSFGFSYDWDREISTSDESYYHWTQWIFLQLYKRGLA 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G      +     V       +  R++AY ++LL  
Sbjct: 160 YEAETPINWCPSCLTGLANEEVKDGH----CDRCGTQVVRKNIRQWILRITAYAERLLED 215

Query: 180 YESHPEFILPIERRNEVI 197
            ES        + +   I
Sbjct: 216 LESLDWPDSIKQMQRNWI 233



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 107/315 (33%), Gaps = 84/315 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      YL      +     K  +W P DL+V G +    H +Y   +    
Sbjct: 520 PQWAGSCW--YYLRYLDPKNTKEFCSKEKEAYWMPVDLYVGGAEHAVLHLLYARFWHKVL 577

Query: 280 -----LSANLPL----------------------------------PKKVFSHGFILHKG 300
                +    P                                    +++ S   +    
Sbjct: 578 YDLGLVHTKEPFQRLINQGMITSYAYQRKNKTLVPIDEVRRLSDTKFEEIGSGEKLTRVI 637

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSL NVI+P ++I+E G D+ R + +          +   GL          GI  
Sbjct: 638 AKMSKSLKNVINPDDMIKEYGADSCRMYEMFMGPLEMSKPWSTQGLI---------GIYR 688

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +  ++  K        P       ++++ +  + ++++ E+  +   + A++Q++  
Sbjct: 689 FLEKVWALSEK--------PLTDQAGSDALIKLLHKTIKKVGEDTASLNFNTAISQMMIC 740

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++E+++      P  L                        LL  + P LA ++++ L   
Sbjct: 741 INELNK--QDSLPRTLW------------------ENFVKLLAPYAPHLAEELWEKLGYT 780

Query: 481 DE--NRCFQSLDQRL 493
           +   +  +   D++L
Sbjct: 781 NSIAHESWPVYDEKL 795


>gi|241764533|ref|ZP_04762552.1| valyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366025|gb|EER60635.1| valyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 974

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 63/423 (14%), Positives = 126/423 (29%), Gaps = 101/423 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSA----------YQDKLLSYYESHPEFILPIERRNEVI 197
                    ++ M  + +F  +S              K +    S     +P    N   
Sbjct: 374 PICTRTGQVIEPMLTDQWFVAMSKVGEGDATGKSIAQKAIDAVASGEVTFVPENWVNT-Y 432

Query: 198 SFVKSGLKDLSLSRKTFDWG--IKIPDDPQY-------------------------IMYV 230
           +   + ++D  +SR+   WG  I    D                            ++  
Sbjct: 433 NQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGNVIVARTEAEAQAKAPGKKLRRDEDVLDT 491

Query: 231 WIDALTNYLTTTGYLDN---PDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           W  +     +T G+ +    P      + P+ + V G DI+ F    +       +  +P
Sbjct: 492 WYSSALVPFSTMGWPEQGDAPTDDFNLYLPSTVLVTGYDIIFFWVARMIMMTTHFTGRVP 551

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------------------- 319
                        +G+K+SKS GNV+DP+++I+                           
Sbjct: 552 FKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALEPLLDKRTTGLRKPETAPTVRKN 611

Query: 320 -----------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
                       G DALR+      + G+   +D    +     +  N + N  SR V M
Sbjct: 612 TQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCNKLWN-ASRFVLM 668

Query: 369 ILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             +  D  +                   F+++D  I S+  +   E+ +  +   +    
Sbjct: 669 NCEGQDCGLKEHTKEECQPGGPAHGYMQFSQADRWISSLLQKTEAEVAKGFEEYRLDNVA 728

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             +   V     D Y +  K      T   + +T     +  +  +  L    +P +   
Sbjct: 729 NTIYDFVWNEYCDWYLEIAKVQIQNGTEAQQRAT-RRTLIRTLEAILRLAHPIIPFITEA 787

Query: 473 IFD 475
           ++ 
Sbjct: 788 LWQ 790



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 28/179 (15%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I           H+GHA+   I D L R+HR+ G + ++  GTD  G       + 
Sbjct: 60  PAFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGFNTVWVPGTDHAGIATQIVVER 119

Query: 65  AGV-----------TT----KVFVDQNSR-----------NFRDMADVLDISYDDFIRTT 98
                         T     K FV +                R M D +D S + F  T 
Sbjct: 120 QLQEQGVSRYDMGPTPPEARKNFVSKVWEWKEQSGNTITTQMRRMGDSVDWSREYF--TM 177

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + +        + K+ ++G IY+G     +  + ++  +D EV              P+
Sbjct: 178 DDKLSKVVTDTFVKLYEQGLIYRGKRLVNWDPKLQSAVSDLEVESEEKDGSLWHIAYPL 236


>gi|193794422|gb|ACF21423.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PKPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|193794362|gb|ACF21393.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794370|gb|ACF21397.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794402|gb|ACF21413.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794420|gb|ACF21422.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794514|gb|ACF21469.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794530|gb|ACF21477.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|330816642|ref|YP_004360347.1| Valyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369035|gb|AEA60391.1| Valyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 955

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 114/365 (31%), Gaps = 60/365 (16%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            +++            +      +P         FV               +   +  D 
Sbjct: 405 TYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVARDEAGARAKADAAGYAGALKRDE 464

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +     ++ G+       K  F P+ + V G DI+ F    +       + 
Sbjct: 465 D-VLDTWFSSALVPFSSLGWPSETPELK-HFLPSSVLVSGFDIIFFWVARMVMMTTHFTG 522

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----------------------- 319
            +P             +G+K+SKS GN +DPI++I+                        
Sbjct: 523 KVPFHTVYMHGLVRDAEGQKMSKSKGNTLDPIDIIDGIGLEDLVAKRTTGLMNPKQAASI 582

Query: 320 --------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                          G DALR+ +      G++  +D    +     +  N + N  +R 
Sbjct: 583 EKKTRKEFADGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRF 639

Query: 366 VSMILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQLIHR 412
           V M  + +D     P               F+ +D  I+S+  RV  +I +   +     
Sbjct: 640 VLMNCEGHDCGTGKPELCGAGDCGPGGYLDFSAADRWIVSLLQRVEADIAKGFDDYRFDN 699

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               +   V +   D Y +  K  +++   P++        + V+  +  L    +P + 
Sbjct: 700 IANSIYKFVWDEYCDWYVELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIPFIT 758

Query: 471 NKIFD 475
             ++ 
Sbjct: 759 EALWQ 763



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 22/178 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       +
Sbjct: 37  KPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMRGDNTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVTTK------------VFVDQNSR--------NFRDMADVLDISYDDFIRTTEKRHH 103
                 K              V +             R +    D S + F  T + +  
Sbjct: 97  RQLDAQKISRHDLGREKFVERVWEWKEKSGSTITGQVRRLGASTDWSREYF--TMDDKLS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              R ++ ++ ++G IY+G     +        +D EV    +       + P+   E
Sbjct: 155 SVVREVFVQLYEQGLIYRGKRLVNWDPVLMTAVSDLEVVSEEEDGSLWHINYPLVSGE 212


>gi|172060412|ref|YP_001808064.1| valyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|171992929|gb|ACB63848.1| valyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 955

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 127/399 (31%), Gaps = 92/399 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    S     +P         +++  ++D  +SR+   WG +IP
Sbjct: 372 PEGTFNPGKSITETSLDVVRSGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 429

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 430 AWYGENGEVFVARNEEEARAQAAAKGYAGALKRDEDVLDTWFSSALVPFSSLGWPNETP- 488

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 489 ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDAEGQKMSKSKG 548

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DPI++++                                       G DALR+ +  
Sbjct: 549 NTLDPIDIVDGIDLETLVAKRTTGLMNPKQAATIEKKTRKEFPDGIAAFGTDALRFTMAS 608

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------- 381
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 609 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGNDKPEVCGAGDCGPG 665

Query: 382 ---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ +D  I+S+  R   +I +   +         +   V +   D Y +  K  ++
Sbjct: 666 GYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWYLELAKV-QI 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   P++        + V+  +  L    +P +   ++ 
Sbjct: 725 QNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  Q     +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|88802742|ref|ZP_01118269.1| putative valyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781600|gb|EAR12778.1| putative valyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 878

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 70/443 (15%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +   +V+DI  DD                +       D +         L+++ +    E
Sbjct: 286 KHQLEVIDIFNDD-----------ASLNSFGLHYQGKDRFVVREEIAQELKEKGFLVKTE 334

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-YYESHPEFILPIERRNEVISF 199
           V+    G         ++    + +F ++       +        E  L  ++       
Sbjct: 335 VHVNKVGTS-ERTKAVIEPRLSDQWFLKMKDLAKPAIDAVLGEDAEINLYPKKFENTYRH 393

Query: 200 VKSGLKDLSLSRKTFDWG--------------------------------------IKIP 221
               ++D ++SR+   WG                                      I   
Sbjct: 394 WMENVRDWNISRQ-LWWGQQIPAYFYGDGKEDFVVAENIDDALVLAKEKTGNVALKITDL 452

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAF 278
              +  +  W  +    ++    + NP+  + K++ P +  V G DIL F    +    +
Sbjct: 453 KQDEDALDTWFSSWLWPMSVFDGIRNPENEEIKYYYPTNDLVTGPDILFFWVARMIVAGY 512

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P      +      +  K+SKSLGN  D +++IE+ G D +R  L+   A G D
Sbjct: 513 EYKGEKPFKNVYLTGLVRDKQRRKMSKSLGNSPDALKLIEDYGADGVRVGLLLSAAAGND 572

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +++D  ++      AN I N           +    +P P           +   + L
Sbjct: 573 LMFEEDLCQQ--GKGFANKIWNAFRLITGW---EVAATLPQPETSKIGLVWYEAKFQKTL 627

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT----VEV 454
            EI ++     +  AL  +  L++      D    W L+   P     +   T    +EV
Sbjct: 628 AEIEDHFAKYRLSDALMAIYKLIN------DDFSSWLLEIVKPAYQQPIDKKTFDAILEV 681

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     +L  F+P L+  I+  +
Sbjct: 682 LENNLKVLHPFMPFLSEDIWQYI 704



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLLGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        + D+      +    L  S D      T +    +
Sbjct: 92  VAKLKAQGIQKSDLTREEFLQHAFDWKDEYGGIILEQLKKLGASCDWERTAFTMDPEMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKVFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIH 190


>gi|301299745|ref|ZP_07205994.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852652|gb|EFK80287.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 805

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 139/411 (33%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +       ++ + GD+ K  Y+G     +  + N  +  +  D      + 
Sbjct: 342 HDERDHEFAQKFDLPIVQVIEGGDVQKEAYTGDGVHINSDFLNGMDKEEAIDAINNWLEE 401

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           N V           + F    Y  + +                     LP     +    
Sbjct: 402 NGVGEKKVNYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLYLPKATDIKPSGT 461

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+      +  D  K K W
Sbjct: 462 GESPLANLDDWVNVVDENGRKGRRETNTMPQWAGSSWYFLRYIDPHNNHEIADYEKLKEW 521

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P +L+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 522 LPVNLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSK 581

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++E+ G D LR + +          + ++GL          G    ++R  +
Sbjct: 582 GNVVNPDDIVEQYGADTLRLYEMFMGPLDASIPWSEEGL---------GGAYKFINRVWN 632

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ + D +          D  +  + +  ++++ E+ +    + A++Q++  V+   + 
Sbjct: 633 LLIDENDNLRDRVTTINNHD--LDKIYNETVKKVTEDYEAMHFNTAISQLMVFVNNAYK- 689

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + +E +  L  LL   VP +  +++  L 
Sbjct: 690 -------------------ADSLPLEYVEGLVKLLSPVVPHITEELWSKLG 721



 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  DKKNYYALDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G + + F  +N  NFR     L +SY  D  + TT+  ++   + +++++  KG  
Sbjct: 89  ALNTGNSPREFTKKNVNNFRRQIKSLGLSYDWDREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+L+  
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVIRKPMRQWVLKITAYADRLIDD 204

Query: 180 YESHPE 185
            +    
Sbjct: 205 LDDLDW 210


>gi|290890338|ref|ZP_06553416.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
 gi|189030331|sp|Q04FL2|SYL_OENOB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|290480023|gb|EFD88669.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
          Length = 810

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+ Q  H+GH       D++ARF+R+ G +VL   G D  G    +
Sbjct: 29  SGKPKYYVMNMFPYPSGQGLHVGHPESYTATDIMARFNRMRGFNVLQPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F ++N ++F+     L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 89  YAIKTGHNPADFTNENIKHFKKQVKSLGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGL 148

Query: 119 IYKGCYSGWY---SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      +            ++EV  G           PV  +  + +  R++ Y ++
Sbjct: 149 AYEDEIMVNWAPDFPGGGIVVANEEVIDGKT----ERGSYPVYRVPMKQWVLRITKYAER 204

Query: 176 LLSYYESHPE 185
           LLS  +    
Sbjct: 205 LLSDLDDLDW 214



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 145/438 (33%), Gaps = 52/438 (11%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     R +    DIS + F                  +
Sbjct: 335 YGTGAIMAVPAHDTRDYEFAKKFDLPIRQVIKGGDISKEAF----TGDGTHINSAFLDVL 390

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             K  I K               N          Q Y  +  PV   E+        +  
Sbjct: 391 DKKQAIEKIIDWLEEHDAGHKQVNYKLRDWIFSRQRYWGEPIPVIHWEDGKQTLVPESEL 450

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWI 232
              L +   + + + P       ++  KS L    ++R+    G +  +  PQ+    W 
Sbjct: 451 PLRLPHL--NQDQMKPSGTGESPLANAKSWL---EVTRQDGVKGRRETNTMPQWAGSSW- 504

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 505 -YFLRYIDPHNDKVLADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGIVPTK 563

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P E+++  G DALR + +      +   +  
Sbjct: 564 EPFQKLVNQGMILGTNHEKMSKSKGNVVNPDEIVDSYGADALRVYEMFMGPLTQSKPWST 623

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + L          GI   + R   +   D DG+ P     +E+D  +  + ++ ++++ E
Sbjct: 624 ESL---------AGIRRYLDRVWRIFTSDGDGINPI--IVSENDHKLDKIFNQTVKKVTE 672

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      + A++Q++  ++E        K  +L K              + +     LL 
Sbjct: 673 DYAAMRFNTAISQMMVFINET------FKAEKLPK--------------KYMNAFLQLLN 712

Query: 464 AFVPKLANKIFDILFVAD 481
              P +  +++  +   +
Sbjct: 713 PVAPHITEELWQRMGHQE 730


>gi|193794526|gb|ACF21475.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|260828189|ref|XP_002609046.1| hypothetical protein BRAFLDRAFT_59451 [Branchiostoma floridae]
 gi|229294400|gb|EEN65056.1| hypothetical protein BRAFLDRAFT_59451 [Branchiostoma floridae]
          Length = 765

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 5/194 (2%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+ + H+GH     I+D +ARF R++G  VL   G D  G     AA   G+    
Sbjct: 1   MFPYPSGRLHMGHVRVYTISDTVARFQRMNGYQVLHPMGWDAFGLPAENAAIERGLHPHD 60

Query: 72  FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   N    R   + L +S+D    I T +  ++   + L+ K+ + G  Y+      + 
Sbjct: 61  WTKSNIEYMRKQIESLSLSFDWEKEISTCDPNYYRWTQYLFLKLFESGLCYRKEALVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D+    +++V +        A+   V+    + +F R++ +   LL   E   E+   
Sbjct: 121 PVDKTVLANEQVDENGRSWRSGAK---VEKKYLKQWFIRITHFSHSLLRGLEDLTEWGKY 177

Query: 190 IERRNEVISFVKSG 203
           ++          +G
Sbjct: 178 VKGMQSWWLGECNG 191



 Score = 53.2 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/469 (10%), Positives = 129/469 (27%), Gaps = 123/469 (26%)

Query: 59  AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC-RILWKKISDKG 117
           A+A     +  K+ +   +   +  A+   + ++  I+ +            +  +  + 
Sbjct: 274 AEAEFEEHIDAKMGIPCLNEVDKSFAEKHGLDFEIVIKHSNDGSAQVVNSAEFTNLDRQV 333

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
              +   +         + + +        Q +     P+                   +
Sbjct: 334 AREEITRTAREKGCGGHWTSANLHDWPISRQRFWGTPIPIVHCPTCK-----------EV 382

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +    LP                   +       G     +    M  ++D+   
Sbjct: 383 PVPFDNLPIELPKVANFNGKGGRPLADASEWVDTTCPKCGGPGRRETD-TMDTFVDSAWY 441

Query: 238 YLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLP 285
           +L      +     +     K  P DL++ GK+    H  Y       A          P
Sbjct: 442 FLRFCDAHNTEAPWRKEVANKLMPVDLYIGGKEHAVMHLYYARFLSHFAHQQGLVSHKEP 501

Query: 286 LPKKVF----------------------------------SHGFILHKGEKISKSLGNVI 311
             + +                                   +   ++ + EK+SKS  N +
Sbjct: 502 FKRLLVQGIVKGPSYRVESTGKYLTPQEVDLSGPEPVEKKTGEKLIVEFEKMSKSKHNGV 561

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           DP E++++ G+D +R F+++ +    D  ++   +         NG+     R   ++ +
Sbjct: 562 DPQELLDQYGIDTVRLFILQGVPPEMDIHWNIKAI---------NGVLRWQGRVWGLVSR 612

Query: 372 DYD---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
             +      P P A + SD+          +E+ ++  +    R                
Sbjct: 613 FIELRGTSPPIPEALSNSDKK---------KEMAQH--SVEFER---------------- 645

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                                    ++  L ++L    P ++++++  L
Sbjct: 646 -------------------------ILCSLVLMLAPLAPHISSEMWQGL 669


>gi|328702417|ref|XP_003241894.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 872

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 5/186 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+ +   YP+   H+GH    +IAD +ARFHR+ G +V    G D  G     AA  
Sbjct: 63  KKFYVLSMFPYPSGHLHMGHVRVYVIADSIARFHRMHGQNVFQPMGWDAFGLPAENAAIL 122

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+    +   N  + +     L  S+D  + + T +  ++   +  + K+   G +Y  
Sbjct: 123 HGLPADKWTSSNIDHMKKQLQELGCSFDWSNELTTCDPTYYKWTQWFFLKMFQSGLVYSK 182

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   DE    +++V    +          V+    + +F + + +   L      
Sbjct: 183 EAEVNWDPVDETVLANEQV---DENGRSWRSGAIVEKKVLKQWFIKTTQFSKALFEGLND 239

Query: 183 HPEFIL 188
                 
Sbjct: 240 PSLIDW 245



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 113/371 (30%), Gaps = 63/371 (16%)

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT- 241
                LP+        F    L    +       G K        M  ++D+   Y+   
Sbjct: 425 QLPVKLPMLDVQSGKKFKSLELVKEWIKTTCPKCG-KEAKRETNTMDTFVDSSWYYIRYL 483

Query: 242 ---TGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKV 290
                     +    K  P D++V GK+    H  Y   F    +         P  K +
Sbjct: 484 DPKNSSQPFDNMLANKMMPVDIYVGGKEHAVLHLYYARFFNHFLHSIGLSPCLEPFKKLL 543

Query: 291 FSHGFI----------------------------------LHKGEKISKSLGNVIDPIEV 316
                +                                  +   EK+SKS  N ++P   
Sbjct: 544 VQGMVMGQSFKNKINGTYLKEDEVIKKGKTYFSKDGDNPVIATWEKMSKSKHNGVEPKNT 603

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I E GVD +R  ++  +A   +  ++ D     +N      +     R+V     D    
Sbjct: 604 ISEYGVDTMRLLVLSSVAPTSNRNWNSDTFPGILNWQHRLWLTIREFRTVRKN-DDVQRH 662

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKPWE 435
                 F + +  +    +  +++   N +    +  A++++  L + +      + P E
Sbjct: 663 TIDSSIFQKEEIKLQDARNYHVKKTSSNFRKSYQLSVAISKLQGLTNIL-----RKSPKE 717

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           L K + +           ++    I+L    P   + ++   FV+   R     +Q    
Sbjct: 718 LIKYSAEYER--------LLAVQIIMLTPMAPHFTSALWSG-FVSAPGRINHKWEQINWE 768

Query: 496 GFMLHKTFDPI 506
             ++H+ +  +
Sbjct: 769 NDVIHQKWPQV 779


>gi|193794444|gb|ACF21434.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPTTQARLATVLHTLAQAVTDL 166


>gi|193794306|gb|ACF21365.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794308|gb|ACF21366.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794314|gb|ACF21369.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794318|gb|ACF21371.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794330|gb|ACF21377.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794346|gb|ACF21385.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794368|gb|ACF21396.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794374|gb|ACF21399.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794382|gb|ACF21403.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794410|gb|ACF21417.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794464|gb|ACF21444.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794472|gb|ACF21448.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794478|gb|ACF21451.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794482|gb|ACF21453.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794484|gb|ACF21454.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794486|gb|ACF21455.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794488|gb|ACF21456.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794490|gb|ACF21457.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|260435959|ref|ZP_05789929.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413833|gb|EEX07129.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 875

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 5/205 (2%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + E+   +  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     
Sbjct: 47  VAEKPGFFALSMFPYPSGSLHMGHVRNYVITDVIARVQRMRGHAVLHPMGWDAFGLPAEN 106

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA    V    + D+N    R   D L +S D      T    ++   + L+ ++ + G 
Sbjct: 107 AAIERNVDPGEWTDRNIDQMRAQLDRLGLSIDWSREQATCHNSYYRWTQWLFLELLEGGL 166

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +   D+    +++V    DG+ + +    V+  +   +F R++ Y + LL+
Sbjct: 167 AYRKNATVNWDPVDQTVLANEQV--DGDGRSWRSGA-LVEQRQLNQWFLRITDYAEPLLN 223

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
             ++   +   +            G
Sbjct: 224 DLDALKGWPERVRTMQANWIGRSEG 248



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 21/207 (10%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           P+   +   +    EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   +
Sbjct: 619 PRDPNTGDKLEVLFEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADV 678

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           + +        +  LV    + I  D    +  P   +++D  +       ++ + E++ 
Sbjct: 679 EGQFR--FLQRLWRLVEAGAARI--DSLEPMHRPADLSDADSGVRRALHLAIKAVSEDLS 734

Query: 407 NQ-LIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           N+  ++ A+++++ L + +              T  D  S    V  E +  L  LL  F
Sbjct: 735 NEIQLNTAISELMKLSNAIS------------STGIDDLS--GPVLQEALSGLVRLLAPF 780

Query: 466 VPKLANKIFDILFVADE--NRCFQSLD 490
            P LA + +  L  +     + +  LD
Sbjct: 781 APHLAEEFWSRLGGSGSVHRQSWPLLD 807


>gi|259046843|ref|ZP_05737244.1| leucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036466|gb|EEW37721.1| leucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 818

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 77/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      YP+ Q  H+GH       D ++R  R  G +VL   G D  G    + 
Sbjct: 43  SKKNFYALDMFPYPSGQGLHVGHPEGYTATDAVSRMKRAQGYNVLHPMGWDAFGLPAEQY 102

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N  NF+   + L  SY  D  I TT+  ++   + ++ K+ + G  
Sbjct: 103 ALDTGNDPAEFTKVNVANFKRQINELGFSYDWDREINTTDPEYYKWTQWIFTKLVEMGLA 162

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G          +PV     + +  +++AY D+LL  
Sbjct: 163 YEAEIPVNWCPALGTVLANEEVIDGKS----ERGGHPVYRKPMKQWMLKITAYADRLLED 218

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 219 LDELDWPESIKDMQRNWIGRSE 240



 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 107/285 (37%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA-------NL 284
                Y+         D  K K W P DL++ G +    H +Y   +           N 
Sbjct: 512 WYFVRYVDPHNKERIADPEKVKQWLPVDLYIGGAEHAVLHLLYARFWYKVLYDLGVVPNK 571

Query: 285 PLPKKVFSHGFILHKG-EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
              +K+F+ G IL +G EK+SKS GNV++P +V+ E G D LR + +          + +
Sbjct: 572 EPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDVVREYGADTLRVYEMFMGPLDASIAWSE 631

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            GL+              + R   +++ D   M          D  +  V  + ++++ E
Sbjct: 632 KGLEGS---------RKFLDRFWRLMIDDNGKMRDRITKLN--DGKLDKVYHQTVKKVTE 680

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +    + A++Q++  V+E  +                       +  + ++ L  L+ 
Sbjct: 681 DFEELHFNTAISQMMIFVNEAYK--------------------ADALPFDYMKGLVQLIA 720

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              P +A +I+       E+  ++      +   ++    + IF 
Sbjct: 721 PLAPHMAEEIWSKFGFT-ESISYEPWPTYDESK-LVEDEVEVIFQ 763


>gi|193794360|gb|ACF21392.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFASVGDLISQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMHLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|228476477|ref|ZP_04061167.1| leucyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251898|gb|EEK10944.1| leucyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 833

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 105/314 (33%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK-----------------------KV------FSHGFILHK--- 299
                   +    P  K                       KV      F H     +   
Sbjct: 547 KFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHMETGEELEQ 606

Query: 300 -GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         +     +++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------SKEIVADNNGALDKVYNETVKSVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFVQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ETGESISYVAWPTW 763


>gi|167570198|ref|ZP_02363072.1| valyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 955

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 116/362 (32%), Gaps = 65/362 (17%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD------PQYI 227
            + L   +                 + ++G   ++ S +          D       + +
Sbjct: 407 YQWLENIQDWCISRQLWWGHQIPAWYGENGDVYVARSEEEARAQAAANGDTGPLRRDEDV 466

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLP 285
           +  W  +     ++ G+ ++       F P+ + V G DI+ F    +       +  +P
Sbjct: 467 LDTWFSSALVPFSSLGWPNDTP-ELRHFLPSSVLVTGFDIIFFWVARMVMMTTHFTNKVP 525

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------------- 316
                        +G+K+SKS GN +DPI++                             
Sbjct: 526 FETVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIGLDALVAKRTTGLMNPKQAATIEKK 585

Query: 317 --------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
                   I   G DALR+ +      G++  +D    +     +  N + N  +R V M
Sbjct: 586 TRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLM 642

Query: 369 ILKDYDGMIPTPG-------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             + +D     P               F+ +D  I+S+  RV  +I +   +        
Sbjct: 643 NCEGHDCGFDKPQSCGAADCGPGGYLDFSAADRWIVSLLQRVEADIAKGFTDYRFDNIAN 702

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   V +   D Y +  K  +++   P++        + V+  +  L    +P +   +
Sbjct: 703 AIYKFVWDEYCDWYLELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPVIPFITEAL 761

Query: 474 FD 475
           + 
Sbjct: 762 WQ 763



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 56/176 (31%), Gaps = 22/176 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWLPGTDHAGIATQIVV 95

Query: 60  ----------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRH 102
                           +         K       +   R +    D S + F  T   + 
Sbjct: 96  ERQLDAQGVSRHELGREKFVERVWEWKEKSGSTITGQIRRLGASPDWSREYF--TMNDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               R ++ ++ ++G IY+G     +        +D EV    +  +      P+ 
Sbjct: 154 SGVVREVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIKYPLD 209


>gi|320547802|ref|ZP_08042086.1| leucine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447562|gb|EFW88321.1| leucine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 833

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  DKPNFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAKNIANFKRQINSLGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 79/302 (26%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P D+++ G +    H +Y   +         +   
Sbjct: 499 WYFLRYIDPHNDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 558

Query: 284 LPLPK-----KVFSHGFILHKGE----------------------------KISKSLGNV 310
            P  K      +    +  H+G                             K+SKSL NV
Sbjct: 559 EPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQAPAKMSKSLKNV 618

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           ++P +V+E  G D LR + +          + ++GL+              + R   ++ 
Sbjct: 619 VNPDDVVERYGADTLRVYEMFMGPLDASIAWSEEGLEGSR---------KFLDRVYRLLT 669

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                   T     E++ ++  V +  ++ + E ++    + A+AQ++  V+  +     
Sbjct: 670 --------TKEVVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAAN----- 716

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                  K +         +  +  +    LL  F P L+ +++  L  + E+  + +  
Sbjct: 717 -------KEDK--------LFADYAKGFVQLLAPFAPHLSEELWQELTHSGESISYVAWP 761

Query: 491 QR 492
             
Sbjct: 762 TW 763


>gi|295677084|ref|YP_003605608.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436927|gb|ADG16097.1| valyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 959

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 126/397 (31%), Gaps = 90/397 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L          +P         +++  ++D  +SR+   WG +IP
Sbjct: 378 PEGTFNPGKSIAETALDVVRDGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 435

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 436 AWYGENGEVFVAKTEEDARAKAAAAGYTGALKRDEDVLDTWFSSALVPFSSLGWPNETQE 495

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K    P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 496 LKHFM-PSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFDTVYVHGLVRDAEGQKMSKSKG 554

Query: 309 NVIDPIEV-------------------------------------IEEVGVDALRYFLVR 331
           N +DPI++                                     I   G DALR+ +  
Sbjct: 555 NTLDPIDIVDGIDLDALVAKRTTGLMNPKQAASIEKKTRKEFPDGIPAFGTDALRFTMAS 614

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--------- 382
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 615 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGFGQPAQCGECGPEGH 671

Query: 383 --FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
             F+++D  I+S   RV  E+ +   +         +   V +   D Y +  K  +++ 
Sbjct: 672 LHFSQADRWIVSQLQRVEAEVAKGFSDYRFDNVANAIYKFVWDEYCDWYVELAKV-QIQT 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             P++        + V+  +  L    +P +   ++ 
Sbjct: 731 GLPNQQRATRRTLLRVLETVLRLAHPVIPFITEALWQ 767



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   I           H+GHA+   I D L R+HR+ G + L+  GTD  G       
Sbjct: 42  NRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIVV 101

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
           +                        +  Q+     +    L   I +     T + +   
Sbjct: 102 ERQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITNQVRRLGASIDWSREYFTMDDKMSA 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R ++ ++ ++G IY+G     +        +D EV    +  +    H P+
Sbjct: 162 AVRDVFVRLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIHYPL 214


>gi|118576253|ref|YP_875996.1| valyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194774|gb|ABK77692.1| valyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 773

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 111/334 (33%), Gaps = 19/334 (5%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI----SFVKSGLKDLSLSR 211
           P+     E +   +S         Y      +      +E              +   + 
Sbjct: 381 PMHRQILENWLDSVSMDWPISRRRYYGTEIPVWHCASCSEPYVPEPGRYYRPWMEQCPAD 440

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
                G    +  Q I   W+D+  + L  + Y  +        +PA L    KDI+R  
Sbjct: 441 SCASCGGTKFEGEQRIFDTWMDSSVSPLFISKYGKDDKF-FESTYPAGLRPQAKDIVRTW 499

Query: 272 AIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
             Y       L+   P  +       +  +G+K+SK  GN IDP+ +++ +G DA R + 
Sbjct: 500 LYYTMLRCDQLTGKRPWSEAWIMGYGLDERGQKMSKRAGNSIDPLPLVKRIGADAFRLWS 559

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
             E++ G D   ++D +         + + N+          D +          E D  
Sbjct: 560 AGEVSHGHDFRCNEDMMVS--TKKFLSKLWNVSRFLSGFSSADAEPS-------AEPDRW 610

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTV 447
           ILS   +++ + +E  +          +           Y +  K        P R S +
Sbjct: 611 ILSELDKLVSKCQEGYEKYDFFVPAVAIREFTWNIFAAHYIELVKGRAYGDPGPGRDSAI 670

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 V+  + +LL    P + + ++  L+  D
Sbjct: 671 -STLHRVLSTILLLLAPITPFITDYLWRELYSKD 703



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             I T   YP+ +P HIG A      D++AR  R+ G +V F  G D +G  +    +  
Sbjct: 40  YTIDTPPPYPSGRPWHIGAAAHYSQIDMIARTARMAGKNVYFPLGIDRNGLPVELYTEKK 99

Query: 66  GVTTKVFVD-------------QNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILW 110
                  ++             +      D  + L +S +  D  RT    +    +  +
Sbjct: 100 HKLRMRDINRDEFLSLCRGTLDELEAEMLDTMEALGLSCNVRDCYRTDSDEYRTLTQSTF 159

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  KG IYK      Y         D E+  
Sbjct: 160 IHLWKKGLIYKATRPNNYDWTSGTTIADAEISY 192


>gi|330444625|ref|YP_004377611.1| leucyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807735|gb|AEB41908.1| leucyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 820

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 7/211 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             +EK Y+     YP+    H+GH       D+LAR+ R  G  VL   G D  G    +
Sbjct: 28  TSKEKYYVLDMFPYPSGAGLHVGHLIGYTATDILARYKRARGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+   +N  NF+     +  SY  D    T++  ++   + L+  +  +G 
Sbjct: 88  YAIRTGTHPKLTTKKNIENFKVQLSAMGFSYDEDREFATSDAEYYHWTQKLFLYLYQQGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y  +     +++EV  G           PV+      +  +++AY DKLL 
Sbjct: 148 AYMADMAVNYCPQLGTVLSNEEVEDG----LSIEGGYPVERRMLRQWILKITAYADKLLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             +         + +   I   K  L    +
Sbjct: 204 GLDDLDWPESVKQLQRNWIGKSKGALIRFFM 234



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 81/304 (26%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY 274
           K      + M  W  +   YL      +        K  +W P DL++ G +    H +Y
Sbjct: 474 KKGRRETHTMPQWAGSCWYYLRFCDAHNLLSPWSKEKESYWMPVDLYIGGAEHAVLHLLY 533

Query: 275 ---WPAFLLSANLPLPKKVF-------------------------------------SHG 294
              W        L   K+ F                                     S  
Sbjct: 534 ARFWHRVFYDGGLVSTKEPFQKLVNQGLVLATSYRLPGKGYVYPEEVHEENGVWKTASGE 593

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +L + EK+SKS  N +DP  +IEE G DALR + +      K+  +   G+        
Sbjct: 594 PVLVRQEKMSKSKLNGVDPQTLIEEYGADALRMYAMFSGPLDKNKLWSNQGV-------- 645

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G    ++R   ++         +       D+  L++  +++  + E+++   ++   
Sbjct: 646 -AGCRRFLNRFFELVT--------SSKVQDVDDQQGLALAYKLVHRVTEDIEKLSLNTIP 696

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +  +     ++ +                   +   +   +     +L    P ++ +++
Sbjct: 697 SNFMEF---LNHFL-----------------KLPVYSKAALALAVRVLAPIAPHISEELW 736

Query: 475 DILF 478
             L 
Sbjct: 737 VYLG 740


>gi|172058284|ref|YP_001814744.1| leucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559918|sp|B1YKH4|SYL_EXIS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171990805|gb|ACB61727.1| leucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 801

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E  Y      YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  EKEGFYALDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  QN   F+     L  SY  D  I TT+ +++   + ++ K+ ++G  
Sbjct: 89  ALDTGNDPREFTAQNIETFKRQLKDLGFSYDWDREINTTDPKYYKWTQWIFTKLYEQGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           +    +  +         ++EV  G         ++PV  +    +  +++ Y D+LL  
Sbjct: 149 FVDEVAVNWCPALGTVLANEEVIDG----LSERGNHPVVRVPMRQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         E +   I   +
Sbjct: 205 LDELDWPESVKEMQRNWIGKSE 226



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 119/360 (33%), Gaps = 62/360 (17%)

Query: 148 QYYNAQHNPVQWME---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-- 202
           Q Y  +  PV  ME    +         +  ++   +       P+    + + +     
Sbjct: 420 QRYWGEPIPVVHMEDGTMKTLDKSELPLELPMIPEIKPSGTGESPLALAEDWLDYTDPVT 479

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLH 261
           GLK    +     WG       ++I                     D  K K+W P D++
Sbjct: 480 GLKGRRETNTMPQWGGSCWYYLRFI------------DPHNEEAIADPEKLKYWLPVDIY 527

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +    P  K       +    EK+SKS GNVI+P
Sbjct: 528 IGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRGNVINP 587

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+++  G D LR + +          + ++GL         +G    + R   +  +  
Sbjct: 588 DEIVKSHGADTLRLYEMFMGPLDASVSWSENGL---------DGARRFLDRVWRLFERTA 638

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           D         T  D     V  + ++++ E+  N   +  ++Q++  V+E ++       
Sbjct: 639 DIQ-----DVTTVDADFERVYHQTVKKVTEDFTNIQFNTGISQLMVFVNEANK------- 686

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR--CFQSLDQ 491
                           +    +R    LL    P L  ++++ L   D      + + D+
Sbjct: 687 -------------QPVLPRHFLRGFIQLLTPVAPHLGEELWEQLGFEDTLTYAAWPTFDE 733


>gi|107022514|ref|YP_620841.1| valyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116689463|ref|YP_835086.1| valyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|105892703|gb|ABF75868.1| valyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116647552|gb|ABK08193.1| valyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 955

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 126/399 (31%), Gaps = 92/399 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    S     +P         +++  ++D  +SR+   WG +IP
Sbjct: 372 PEGTFNPGKSITETSLDVVRSGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 429

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 430 AWYGENGEVFVARDEEEARAQAAAKGYAGALKRDEDVLDTWFSSALVPFSSLGWPNETP- 488

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 489 ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDAEGQKMSKSKG 548

Query: 309 NVIDPIEV-------------------------------------IEEVGVDALRYFLVR 331
           N +DPI++                                     I   G DALR+ +  
Sbjct: 549 NTLDPIDIVDGIDLDTLVAKRTTGLMNPKQAATIEKKTRKEFPDGIPAFGTDALRFTMAS 608

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------- 381
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 609 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGNDKPEVCGAGDCGPG 665

Query: 382 ---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ +D  I+S+  R   +I +   +         +   V +   D Y +  K  ++
Sbjct: 666 GYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWYLELAKV-QI 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   P++        + V+  +  L    +P +   ++ 
Sbjct: 725 QNGTPEQQRATRRTLLRVLETVLRLAHPVIPFITEALWQ 763



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       
Sbjct: 36  SRPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVV 95

Query: 63  QNAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                        +  Q     +   R +    D S + F  T + + 
Sbjct: 96  ERQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITGQVRRLGASTDWSREYF--TMDDKM 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
               R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 154 SAAVRDVFVTLYEQGLIYRGKRLVNWDPVLMTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|193794480|gb|ACF21452.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794500|gb|ACF21462.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794508|gb|ACF21466.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         +   +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELQDIDRALLDAIEAGFASVGGLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPETQARLATVLHTLAQAVADL 166


>gi|166154419|ref|YP_001654537.1| leucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155294|ref|YP_001653549.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335678|ref|ZP_07223922.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687406|sp|B0B9V9|SYL_CHLT2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687463|sp|B0BBI9|SYL_CHLTB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|165930407|emb|CAP03900.1| leucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931282|emb|CAP06854.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 819

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 7/187 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR  R  G  VL   G D  G    +
Sbjct: 28  ETKTKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARCKRAQGFSVLHPMGWDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N  NF+     +  SYD      T++  ++   + L+  + +KG 
Sbjct: 88  YAIRTGTHPRETTEKNIANFKKQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y    +  Y        +++E+  G           PV+      +  R++A+ D+LL 
Sbjct: 148 AYMADMAVNYCPELGTVLSNEEIENGFS----VDGGYPVERRMLRQWVLRITAFADQLLE 203

Query: 179 YYESHPE 185
             +    
Sbjct: 204 GLDELDW 210



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 81/299 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIY---WP 276
             + M  W  +   YL      +        K ++W P DL++ G +    H +Y   W 
Sbjct: 478 ETHTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYIGGAEHAVLHLLYARFWH 537

Query: 277 AFLLSAN-----LPLPKKV--------------------------------FSHGFILHK 299
                A       P  K V                                 S   +  +
Sbjct: 538 QVFYEAGIVSTPEPFKKLVNQGLVLATSYRIPGKGYIYPETAKEENGKWVAPSGEELDVR 597

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N +DP  +I+E G DA+R + +      K+  +   G+          G  
Sbjct: 598 QEKMSKSKLNGVDPQILIDEFGADAVRMYAMFSGPLDKNKLWSNQGV---------AGCR 648

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
             ++R   M+  D            +++   LS+  +++Q + + ++   ++   +  + 
Sbjct: 649 RFLNRFYEMVSSDR--------VKEDNNFEGLSLAHKLVQRVTDAIEKLSLNTIPSSFME 700

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++      D  K     K+               +      L    P ++ +++ +L 
Sbjct: 701 FIN------DFVKLAVYPKS--------------AVEMAVRALAPIAPHISEELWVLLG 739


>gi|193794412|gb|ACF21418.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGRI-PEPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|170702108|ref|ZP_02893020.1| valyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170132983|gb|EDT01399.1| valyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 955

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 92/399 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    +     +P         +++  ++D  +SR+   WG +IP
Sbjct: 372 PEGTFNPGKSITETSLDVVRNGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 429

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 430 AWYGENGEVFVARNEEEARAQAAAKGYAGALKRDEDVLDTWFSSALVPFSSLGWPNETP- 488

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 489 ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDAEGQKMSKSKG 548

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DPI++++                                       G DALR+ +  
Sbjct: 549 NTLDPIDIVDGIDLETLVAKRTTGLMNPKQAATIEKKTRKEFPDGIAAFGTDALRFTMAS 608

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------- 381
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 609 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGSEKPEVCGAGDCGPG 665

Query: 382 ---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ +D  I+S+  R   +I +   +         +   V +   D Y +  K  ++
Sbjct: 666 GYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWYLELAKV-QI 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   P++        + V+  +  L    +P +   ++ 
Sbjct: 725 QNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  Q     +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 17/277 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G       + IM VW D+ ++++                WPAD+++ G D     F
Sbjct: 525 CPKCGGTHFRKEKDIMDVWFDSGSSHMGVCKRRP------ELSWPADMYLEGSDQHRGWF 578

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +  ++   P    +     +  +G K+SKSLGNV+ P EVI++ G D +R +  
Sbjct: 579 QSSLLTSVAVTGKAPYRSVLTHGYVLDGEGRKMSKSLGNVVVPQEVIDQYGADIVRLW-A 637

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                 +D       LK+   A+    + N +   +      DY+          E D+ 
Sbjct: 638 ASSDYKQDVRISPVILKQL--AEAYRKVRNTIRYILGNTHDFDYETQKVAFAEMEELDQW 695

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL--KKTNPDRAS 445
            L     + +++ E  +    H     +     V     Y D  K      +K    R S
Sbjct: 696 ALMRFEALKKDVTEAYETYDFHVLFHAIHDFCTVDMSSFYLDIIKDRLYTSRKDGKARRS 755

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
               +T +++R+L ++L   +     +++  +    +
Sbjct: 756 AQTAMT-QILRELMVMLMPVLSFTMEEVYQYMNKPAD 791



 Score = 90.2 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 59/194 (30%), Gaps = 15/194 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           +K  +     Y N + H+GHA   ++ D++ ++    G D  +  G D HG  I  A   
Sbjct: 53  KKFVLHDGPPYANGKIHMGHALNKVLKDIIIKYKYAQGYDTPYVPGWDTHGMPIEHACLK 112

Query: 63  -----------QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             + +  Q     R     L +   +D    T +         +
Sbjct: 113 ATGVDRHKLSPVELRKMCREYALQWIDTQRKDFKRLGVLGDWDHPYVTLDPHFEAEQIRV 172

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +++KG IYKG  + ++    E    + E+              P+            
Sbjct: 173 FGTMANKGYIYKGKKTVYWCPHCETALAEAEIEYADQKTPTIFVKMPLVKDNGLTPEAAQ 232

Query: 170 SAYQDKLLSYYESH 183
                 ++      
Sbjct: 233 GKKAYMVIWTTTPW 246


>gi|193794432|gb|ACF21428.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + E +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELQDIDRALLDAVEAGFASVGEFIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|153005579|ref|YP_001379904.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029152|gb|ABS26920.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 838

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA
Sbjct: 33  DAEKRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGHDVLHPIGFDALGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G   +    +N   FR     L     +D  + T +  ++   +  + ++ + G +Y
Sbjct: 93  IKDGRHPEERTRENIVAFRAEMKKLGYAFDWDREVVTADPSYYRWNQWFFLRMLELGIVY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +         +++V             +PV       + FR++A+   LL   
Sbjct: 153 RREGKANWCTGCATVIANEQVVDDT----CERCGSPVVEKVIPEWAFRITAFAQDLLDGL 208

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   E+   I            G
Sbjct: 209 DRLTEWPERITTMQRNWIGKSVG 231



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/363 (15%), Positives = 121/363 (33%), Gaps = 49/363 (13%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS------GLKDLSL 209
           P        + F    Y    +          +P+      ++  K       G   L+ 
Sbjct: 425 PTVRWHLRDWGFSRQRYWGTPIPIVYCPDHGAVPVPEDQLPVTLPKEAIITGTGEPPLAK 484

Query: 210 SRKTFDWGIKIPDDP----QYIMYVWIDALTNYLTT----TGYLDNPDGSKAKFWPADLH 261
                +        P       M  ++D+   Y                  A++ P D++
Sbjct: 485 VPSFVNTTCPRCGKPARREVDTMDTFVDSSWYYARYLSPKDDTRPFDPAEAARWLPVDVY 544

Query: 262 VIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y+  +            + P  + V         G K+SK  GNV+ P
Sbjct: 545 VGGPEHAVMHLLYFRFWHRVMHRLGLVREDEPCKRLVTQGIVNGPDGRKMSKRWGNVVAP 604

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++   G D +R F++      KD  +  + +         +G+   ++R   +     
Sbjct: 605 GPMVARFGADTVRLFMLFAAPPEKDIDWSDEQV---------DGMFRFLARVWRIFHARQ 655

Query: 374 DGMIPTPGAFTESDESILS---VCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFD 429
           +       A  ++    L       R ++ + E ++     + ++A ++ LV+ + +   
Sbjct: 656 ECFRAPEAALAQAQGDFLELRRRTHRTIKRVTEGLEGELKFNTSIAALMELVNALYQ--- 712

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQS 488
             +P    K+ P++A+       E +  +A LL  F P  A +++ ++L  A   R    
Sbjct: 713 -LEP----KSEPEQAA-----VREALLAVATLLAPFAPHAAEELWHEVLGPAARERLLAE 762

Query: 489 LDQ 491
              
Sbjct: 763 APW 765


>gi|116490881|ref|YP_810425.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116091606|gb|ABJ56760.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 829

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+ Q  H+GH       D++ARF+R+ G +VL   G D  G    +
Sbjct: 48  SGKPKYYVMNMFPYPSGQGLHVGHPESYTATDIMARFNRMRGFNVLQPMGWDAFGLPAEQ 107

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F ++N ++F+     L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 108 YAIKTGHNPADFTNENIKHFKKQVKSLGFSYDWDREINTTDPEYYKWTQWIFEQLYKKGL 167

Query: 119 IYKGCYSGWY---SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      +            ++EV  G           PV  +  + +  R++ Y ++
Sbjct: 168 AYEDEIMVNWAPDFPGGGIVVANEEVIDGKT----ERGSYPVYRVPMKQWVLRITKYAER 223

Query: 176 LLSYYESHPE 185
           LLS  +    
Sbjct: 224 LLSDLDDLDW 233



 Score =  116 bits (291), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 145/438 (33%), Gaps = 52/438 (11%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +     R +    DIS + F                  +
Sbjct: 354 YGTGAIMAVPAHDTRDYEFAKKFDLPIRQVIKGGDISKEAF----TGDGTHINSAFLDVL 409

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             K  I K               N          Q Y  +  PV   E+        +  
Sbjct: 410 DKKQAIEKIIDWLEEHDAGHKQVNYKLRDWIFSRQRYWGEPIPVIHWEDGKQTLVPESEL 469

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWI 232
              L +   + + + P       ++  KS L    ++R+    G +  +  PQ+    W 
Sbjct: 470 PLRLPHL--NQDQMKPSGTGESPLANAKSWL---EVTRQDGVKGRRETNTMPQWAGSSW- 523

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 524 -YFLRYIDPHNDKVLADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGIVPTK 582

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P E+++  G DALR + +      +   +  
Sbjct: 583 EPFQKLVNQGMILGTNHEKMSKSKGNVVNPDEIVDSYGADALRVYEMFMGPLTQSKPWST 642

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + L          GI   + R   +   D DG+ P     +E+D  +  + ++ ++++ E
Sbjct: 643 ESL---------AGIRRYLDRVWRIFTSDGDGINPI--IVSENDHKLDKIFNQTVKKVTE 691

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      + A++Q++  ++E        K  +L K              + +     LL 
Sbjct: 692 DYAAMRFNTAISQMMVFINET------FKAEKLPK--------------KYMNAFLQLLN 731

Query: 464 AFVPKLANKIFDILFVAD 481
              P +  +++  +   +
Sbjct: 732 PVAPHITEELWQRMGHQE 749


>gi|193794304|gb|ACF21364.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794322|gb|ACF21373.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794328|gb|ACF21376.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794338|gb|ACF21381.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794340|gb|ACF21382.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794342|gb|ACF21383.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794356|gb|ACF21390.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794364|gb|ACF21394.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794378|gb|ACF21401.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794380|gb|ACF21402.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794392|gb|ACF21408.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794408|gb|ACF21416.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794434|gb|ACF21429.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794440|gb|ACF21432.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794454|gb|ACF21439.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PQPAELEDIDRALLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|212638274|ref|YP_002314794.1| leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226731223|sp|B7GK53|SYL_ANOFW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212559754|gb|ACJ32809.1| Leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 805

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  GKRKFYALDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N  NFR     L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTEKNINNFRRQIKSLGFSYDWDREVNTTDPNYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV  G          +PV     + +  R++AY D+LL  
Sbjct: 149 YMDEVPVNWCPALGTVLANEEVIDGKS----ERGGHPVIRKPMKQWMLRITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         E +   I   +
Sbjct: 205 LEELDWPESIKEMQRNWIGRSE 226



 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 61/415 (14%), Positives = 141/415 (33%), Gaps = 61/415 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +      K++   GDI K  Y+G     +  + N     +         + 
Sbjct: 341 HDERDYEFAKKFNLPIKQVVAGGDISKEAYTGDGEHINSDFLNGLNKEEATKKMIEWLEA 400

Query: 155 N----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N             + F    Y  + +         + P+      +   K+     S +
Sbjct: 401 NGKGEKKVSYRLRDWLFSRQRYWGEPIPIIHWEDGTMTPVPEEELPLVLPKTDEIKPSGT 460

Query: 211 RKTFDWGIKIPD---DPQ---------YIMYVWIDALTNYLTTTGYLDNPDGSK----AK 254
            ++    I+      DP+           M  W  +   YL      ++   +      K
Sbjct: 461 GESPLANIEEWVSVVDPKTGKKGRRETNTMPQWAGSCWYYLRYIDPHNDKQLADPEKLEK 520

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           + P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++E  G D LR + +          +   GL         +G    + R  
Sbjct: 581 KGNVVNPDDIVESHGADTLRLYEMFMGPLEASIAWSTKGL---------DGARRFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + +++   + P      E+D ++  V  + ++++ E+ +    + A++Q++  ++E  +
Sbjct: 632 RLFVEENGELNPKIVDNPETD-TLERVYHQTVKKVTEDYEALRFNTAISQLMVFINEAYK 690

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                                  +    +     LL    P +A ++++ L  ++
Sbjct: 691 --------------------APILPKAYMEGFVKLLSPVCPHIAEELWEKLGYSN 725


>gi|153946992|ref|YP_001402415.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|166980060|sp|A7FMD7|SYI_YERP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|152958487|gb|ABS45948.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 938

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 131/409 (32%), Gaps = 46/409 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+            +   VQW+ + G   
Sbjct: 395 HVEKLLHSYPCCWRHKTPIIFRATPQWFISMDQKGLRKQS---LQEIKDVQWIPDWGQAR 451

Query: 168 RLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             +   ++          + +P+     +  E +      L +    R     GI+   D
Sbjct: 452 IETMVANRPDWCISRQRTWGVPMSLFVHKETEQLHPRSIELMEEVAKRVE-QDGIQAWWD 510

Query: 224 PQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                               + VW D+ + + +                P D+++ G D 
Sbjct: 511 LDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----ARPEFGGHSP-DMYLEGSDQ 565

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F +    A  +    P  + +     +  +G K+SKS+GN I P +V+ ++G D L
Sbjct: 566 HRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLGGDIL 625

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TP 380
           R ++      G+      + LK+  ++         +  +   +L + +G  P      P
Sbjct: 626 RLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLNGFDPAQHQVKP 678

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-K 437
                 D   +        EI E  +N   H  + +++   S      Y D  K  +   
Sbjct: 679 EEMVVVDRWAVGRAQAAQAEIMEAYENYDFHLVVQRLMQFCSVEMGSFYLDIIKDRQYTA 738

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           K +     +       +   L   +   +   A++I++ L    +   F
Sbjct: 739 KGDGIARRSCQTALFHIAEALVRWMAPIMSFTADEIWNHLPGERQQYVF 787



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 17/207 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRTACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                KI D G ++KG     +     +   + EV Y     Q  + + N V        
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEYYDKTSQSIDVRFNAVDTA-TVAA 224

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
            F +S     +     +   + LP  R
Sbjct: 225 KFGVSVVNGPISLVIWTTTPWTLPANR 251


>gi|251772727|gb|EES53289.1| isoleucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 948

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 131/439 (29%), Gaps = 26/439 (5%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
           T  DE G+   +            + + +       +   I  +  I      H   C+ 
Sbjct: 359 TPVDEKGRYSERIKTTHPDWVGKRIGEIAPLMITFLEEAGILLESQIIEHSYPHCWRCKN 418

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
                +                  EA    + + +  + +          W       + 
Sbjct: 419 PVYYRATSQWFLSLERKNLREKTLEAIGEVNWIPEKGENRIRGMIETRPDWCLSRQRAWG 478

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL---------SRKTFDWGIK 219
           +                 + P           K GL                     G K
Sbjct: 479 VPIPAIFCS---HCGKTSLEPSLIMRAADKTEKEGLDFWFDEAARKDFLKDSPCPHCGSK 535

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
             +  + I+ VW D+  ++                 WPADL++ G D     FH+    A
Sbjct: 536 AVEKEKDILDVWFDSGVSHEAVLKKRA------GAKWPADLYLEGSDQHRGWFHSSLLTA 589

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L    P    +     +  +G K++K+LGNVI P E+ ++ G D LR +        +
Sbjct: 590 MALEGTPPYRSVLTHGFVVDGQGRKMAKTLGNVISPKEITDKYGADVLRLWAASADYQ-E 648

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D     + +   V++     I N V   +S +    D   P   +    D   LS    V
Sbjct: 649 DTRLSPEIVNNTVDS--YRKIRNTVRFILSNLYDFADSEKPKTVSADPLDGWALSQWEEV 706

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKK-TNPDRASTVLYVTVEV 454
            +EI      +     ++Q+ +  S     +YFD  K     +  + +           +
Sbjct: 707 KREILAAYDEKRFAHVISQLNNFCSVTLSAQYFDIIKDRLYAEAADGNLRRGTQSTLRIL 766

Query: 455 IRQLAILLQAFVPKLANKI 473
           + ++  LL   +P    +I
Sbjct: 767 LDEMVPLLHPVLPFTTTEI 785



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 15/185 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+R    +     Y N   H+GHA   I+ D++ R     G  + +  G D HG  I  
Sbjct: 44  LKDRPVFVLHDGPPYANGHLHMGHALNKILKDIINRVAIKKGHRITYIPGWDCHGLPIEH 103

Query: 61  A-------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 +   +  ++   +    + I   +D    T        
Sbjct: 104 KVLKDLGKRRGDLSDSEIRAHCRKSAETFAKIQSEEFLRMGILGDFDHPYLTMSWDFEAD 163

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
                 ++ ++G IYKG     +    E    D EV              P +   ++ Y
Sbjct: 164 ILRQLARMVEQGRIYKGEKPVLWCGFCETALADAEVEYAPHRSTSVTVLFPSEVQGKKRY 223

Query: 166 FFRLS 170
           +   +
Sbjct: 224 YPIWT 228


>gi|156377136|ref|XP_001630713.1| predicted protein [Nematostella vectensis]
 gi|156217739|gb|EDO38650.1| predicted protein [Nematostella vectensis]
          Length = 1163

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 69/452 (15%), Positives = 146/452 (32%), Gaps = 38/452 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKV---FVDQNSRNFRDMADVLDISYDDFI--RTTEKRH 102
               D +G+  A+    AG   K     + +  +  R +     I ++     R+     
Sbjct: 337 PCPVDANGKFTAEVTDFAGQYVKDADKHIIKWLKQHRRLVHQSTIKHNYPFCWRSDTPLI 396

Query: 103 HDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + ++    D      + CY     ++++ ++N  +     +         P+ 
Sbjct: 397 YKAVPGWFIRVESIVDKLLANNQKCYWVPEFVKEKRFHNWLQNAHDWNVSRNRYWGTPIP 456

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + Y   +       L+         L  E  + V    K+G   L    +      
Sbjct: 457 LWVSDDYQEVVCVGSVDELAELSGVRLTDLHRENVDHVTIPSKTGRGVLRRVPE------ 510

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                   +   W ++ +       Y         K +PAD    G D     F+ +   
Sbjct: 511 --------VFDCWFESGSMPYAQVHYPFERKEDFEKTFPADFIAEGIDQTRGWFYTLLVI 562

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  L    P    + +   +   G K+SK   N  DP+E+I + G DALR +L+      
Sbjct: 563 STALFDKPPFKNLIVNGLVLAADGAKMSKRKKNYPDPMEIINKHGSDALRLYLINSPVVR 622

Query: 337 KDGF-YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---------S 386
            +   + + G+K  V             R +S  +  +  +     A+ E          
Sbjct: 623 AETLKFQEKGVKDVVKDVFLPWYN--AYRFLSQSIDQFQRVHNVNFAYDENNTMELHNIM 680

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRAS 445
           D+ ILS    ++Q + + M    ++  + +++  +    + Y    +         + A 
Sbjct: 681 DKWILSFTQSLVQFVHQEMDAYRLYTVVPRLVKFIEYLTNWYVRFNRKRLKGDQGQEDAM 740

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +     V+  +  L+  F P L   I+  +
Sbjct: 741 QAIQTLFGVVLTITKLMAPFTPFLTEHIYQNM 772



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 54/152 (35%), Gaps = 7/152 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R +        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  EGRPRYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQTGYHVERRFGWDCHGLPVVYD 95

Query: 60  ---KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKIS 114
                        +  V + S ++  +   L   I +++  +T      +T   ++K++ 
Sbjct: 96  VAKMGIAKYNDECRKIVMRYSTDWERIVSRLGRWIDFENDYKTLYPWFMETVWWVFKQLH 155

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +K  +Y+G     YS       ++ E  +   
Sbjct: 156 EKNMVYRGFKVMPYSTVCNTPLSNFESNQNYK 187


>gi|322388643|ref|ZP_08062243.1| leucine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140563|gb|EFX36068.1| leucine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 833

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPADFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDDLDWPESIKDMQRNWI 224



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 82/314 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 487 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWH 546

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 547 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVETGEELEQ 606

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 607 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 658

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E++ ++  V +  ++ + E +++   + A+AQ++
Sbjct: 659 -KFLDRVYRLIT--------TKEIVAENNGALDKVYNETVKAVTEQIESMKFNTAIAQLM 709

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  +            K +         + V+  +    L+  F P LA +++  + 
Sbjct: 710 VFVNAAN------------KEDK--------LYVDYAKGFIQLIAPFAPHLAEELWQTVA 749

Query: 479 VADENRCFQSLDQR 492
              E+  + +    
Sbjct: 750 ATGESISYVAWPTW 763


>gi|323309046|gb|EGA62275.1| Vas1p [Saccharomyces cerevisiae FostersO]
          Length = 854

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 138/439 (31%), Gaps = 64/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R     ++  K +    +  +          D        + + +  E+ K A     
Sbjct: 231 DARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVX 290

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           + Q        E  YF  L   QD  +S                E     +         
Sbjct: 291 DGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRIDGDYWVAG 350

Query: 211 RKT-----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           R              +    +  D   ++  W  +     +T G+ +        F+P  
Sbjct: 351 RSMEEAEKKAAAKYPNSKFTLEQDED-VLDTWFSSGLWPFSTLGWPEKTK-DMETFYPFS 408

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +      L+ ++P  K+VF H  +   +G K+SKSLGNVIDP++V
Sbjct: 409 MLETGWDILFFWVTRMILLGLKLTGSVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDV 467

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +D L   L++     ++                                      
Sbjct: 468 ITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRDI 527

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
           + D L+        N I      ++  +  DY         G  +  ++ IL   +   +
Sbjct: 528 NLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGLSGNESLVEKWILHKLTETSK 587

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + E +  +    + + +        D Y +  K + +++ +     +       ++   
Sbjct: 588 IVNEALDKRDFLTSTSSIYEFWYLICDVYIENSK-YLIQEGSAIEKKSAKDTLYILLDNA 646

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P ++ +++  L
Sbjct: 647 LKLIHPFMPFISEEMWQRL 665


>gi|224115854|ref|XP_002317141.1| predicted protein [Populus trichocarpa]
 gi|222860206|gb|EEE97753.1| predicted protein [Populus trichocarpa]
          Length = 974

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 112 TSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQ 171

Query: 61  AAQNAGVTTKVFVDQNSRNFRD-MADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
            A   G   K+   +N   F       L +SY  D  I TTE +++   + ++ ++  +G
Sbjct: 172 YAIETGTHPKITTLRNINRFLSLQLKSLGLSYDWDREISTTEPQYYKWTQWIFLQLLKRG 231

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      +         ++EV  G          +PV       +  +++AY D+LL
Sbjct: 232 LAYQAEVPVNWCPALGTVLANEEVVDG----VSERGGHPVIRKPMRQWMLKITAYADRLL 287

Query: 178 SYYESHPEFILPIERRNEVISFVK 201
              +         E +   I   +
Sbjct: 288 EDLDDLDWPESVKEMQRNWIGRSE 311



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 43/212 (20%)

Query: 284 LPLPKKVFSHGFILHKG----------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
           +P  K + S    + KG           K+SKS GNV++P +V+ E G D+LR + +   
Sbjct: 703 IPEEKVIKSGDSFVLKGDPSIRLIARAHKMSKSRGNVVNPDDVVSEYGADSLRLYEMFMG 762

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI----LKDYDGMIPTPGAFTESDES 389
                  +   G++         G+   + R+  +I    L D      T     E    
Sbjct: 763 PFRDSKTWSTSGIE---------GVYRFLGRTWRLIVGSPLPDGTFRDGTVAIDGEPSFE 813

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
            L    + + ++ E ++    +  ++ ++  ++   ++   + P  + K           
Sbjct: 814 QLRTLHKCIAKVTEEIEGTRFNTGISAMMEFINAAYKW--DKLPRSIIKE---------- 861

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                      LL  + P +A +++  L  ++
Sbjct: 862 --------FVFLLSPYAPHMAEELWFRLGHSN 885


>gi|73666911|ref|YP_302927.1| leucyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|123759459|sp|Q3YSH6|SYL_EHRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72394052|gb|AAZ68329.1| leucyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 829

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 6/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++ + Y+     YP+   H+GH     I DV+AR+ R  G++V    G D  G     AA
Sbjct: 23  KKAQCYVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGINVFHPIGWDAFGLPAENAA 82

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  +  + +   N  N R     + +SYD    + T +  ++   +  +      G  Y
Sbjct: 83  LSYNINPQTWTKNNIDNMRCQLKSIGLSYDWNKELATCDADYYKHEQAFFLDFLKCGLAY 142

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            V+  +   +F +++ + ++LL+  
Sbjct: 143 RKESLVNWDPIDQTVLANEQVIDGKG----WRSGAVVEKRKLSQWFLKITDFAEELLNDL 198

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   ++   E       G
Sbjct: 199 KVLDKWPEKVKLMQERWIGRSEG 221



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 28/204 (13%)

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
              + + EK+SKS  NV++   +I++ G D  R F++ +    +D  +  DG++      
Sbjct: 583 HVNVGRAEKMSKSKKNVVNLEYIIDKYGADTARLFILSDTPPDRDIEWLDDGIE------ 636

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV--CSRVLQEIRENMQNQLIH 411
              G    +S+   MI+  YD +          +++I       +++ +I  +++   ++
Sbjct: 637 ---GASKYLSKLWRMIVS-YDQINLNFNVEDIPEDAIKYRRCVHKIVSDITSDLEFCRLN 692

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A+   L + +                  R S    V  E I  L  +++ F+P +A 
Sbjct: 693 CAVAKFRELSNILSEMI--------------RTSVNSDVVSEAICILIRVIEPFIPHIAE 738

Query: 472 KIFDILFVAD--ENRCFQSLDQRL 493
           K+++ +   D   N+ +   D  L
Sbjct: 739 KLWENIGGKDMLWNQMWPKADTEL 762


>gi|85374704|ref|YP_458766.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787787|gb|ABC63969.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 836

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 70/189 (37%), Gaps = 7/189 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++ K Y+     YP+   H+GH     I+D +AR  R  G + L   G D  G     A
Sbjct: 45  SDKPKRYVLGMFPYPSGNAHMGHVRVYAISDAVARLSRFRGFETLHPLGWDAFGLPAENA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRD-MADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           A         +  +N    +D     L +S+  D  I +     +   + L++ + D   
Sbjct: 105 AIQNNADPAEWTQRNIATMKDEQFSRLGLSFDLDQEINSASPEFYKWTQWLFQTLYDHDL 164

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +Y+      +   D+    +++V  G           PV+  +   ++ R++ +   L  
Sbjct: 165 VYRANGWVNWDPVDQTVLANEQVIDGKG----WRSGAPVERRQLPQWYVRITRFAQSLWD 220

Query: 179 YYESHPEFI 187
             ++     
Sbjct: 221 GLDTLQGHW 229



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 109/261 (41%), Gaps = 28/261 (10%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS 281
           D              YL           S+A+ W P D +V G +    H IY+      
Sbjct: 507 DTMDTFMCSSWYAWRYLDAKNGEQAFRESRAEDWMPIDYYVGGLEHASQHLIYFRFISHF 566

Query: 282 ANL-------PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
            +           K    +G +   GEK+SKS GNV+ P E +++ G DALR +++ +  
Sbjct: 567 LHAIGMTPTSEPVKNFLDNGLVKLGGEKMSKSKGNVVIPTEAVDKYGADALRLYILADTP 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
             +D  +D  G++ +      + I  L  +  S        +   P   T+++++ +   
Sbjct: 627 LRRDIDWDDSGIEGKQR--FLSQIWTLAGQIASA-----PALEGEPAPGTDAEKAAMREL 679

Query: 395 SRVLQEIRENMQNQL-IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
           +++ +E+ E+++ +   H A+A++ S V E+       +P     ++ ++      +   
Sbjct: 680 AKIAKEVAEDLEERRGFHNAIARLHSFVGEL-------RPLVAGASDAEK-----PLLRH 727

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+ +   +L  F P +A  ++
Sbjct: 728 VMAEFMKVLGVFAPHMAEYLW 748


>gi|315641872|ref|ZP_07896864.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482440|gb|EFU72980.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 807

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 32  QKPKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRSQGYNVLHPMGWDAFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 92  ALDTGNDPAEFTKKNIETFRHQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +         ++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 152 YEAEVAVNWVPELGTVIANEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLED 207

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 208 LEEVDWPESIKEMQRNWI 225



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 95/258 (36%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 501 WYFLRYIDPHNKKALADYGKLTRWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTK 560

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P +V+ + G D LR + +          + +
Sbjct: 561 EPFQKLFNQGMILGGNNEKMSKSRGNVVNPDDVVTQYGADTLRMYEMFMGPLDASIAWSE 620

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+              + R   +I+ +   +       T +D S+  V ++ ++++ E
Sbjct: 621 NGLEGS---------RKFLERVWRLIVDEEGKLRDRIT--TINDGSLTKVYNQTVKKVTE 669

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +      + A++Q++  V+E  +                       +  E +     LL 
Sbjct: 670 DYNQLHFNTAISQMMVFVNEAYK--------------------AESLCYEYVEGFVQLLA 709

Query: 464 AFVPKLANKIFDILFVAD 481
              P ++ +++++L   D
Sbjct: 710 PIAPHISEELWEVLGNKD 727


>gi|22127574|ref|NP_670997.1| isoleucyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45443437|ref|NP_994976.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594968|ref|YP_069159.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108810058|ref|YP_653974.1| isoleucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108810512|ref|YP_646279.1| isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600412|ref|YP_001164488.1| isoleucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260489|ref|ZP_01917217.1| isoleucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418737|ref|YP_001605365.1| isoleucyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927280|ref|ZP_02223112.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937786|ref|ZP_02226347.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008941|ref|ZP_02229839.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211935|ref|ZP_02237970.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401654|ref|ZP_02307148.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418708|ref|ZP_02310461.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426059|ref|ZP_02317812.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167469838|ref|ZP_02334542.1| isoleucyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|170025803|ref|YP_001722308.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186893970|ref|YP_001871082.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218927672|ref|YP_002345547.1| isoleucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229836943|ref|ZP_04457108.1| isoleucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840362|ref|ZP_04460521.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842442|ref|ZP_04462597.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900701|ref|ZP_04515825.1| isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487931|ref|ZP_06205005.1| isoleucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294502571|ref|YP_003566633.1| isoleucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81594653|sp|Q8ZIM0|SYI_YERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81640431|sp|Q66ES4|SYI_YERPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122980348|sp|Q1CMV1|SYI_YERPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123371958|sp|Q1C0J3|SYI_YERPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166229781|sp|A4TQF3|SYI_YERPP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782458|sp|B2K3M6|SYI_YERPB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782459|sp|A9R008|SYI_YERPG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782460|sp|B1JKZ8|SYI_YERPY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21960680|gb|AAM87248.1|AE013973_7 isoleucine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45438306|gb|AAS63853.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51588250|emb|CAH19857.1| isoleucine tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108774160|gb|ABG16679.1| Isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108781971|gb|ABG16029.1| Isoleucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346283|emb|CAL19154.1| isoleucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212108|gb|ABP41515.1| Isoleucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289897|gb|EDM39974.1| isoleucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351552|gb|ABX85500.1| isoleucyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165914198|gb|EDR32814.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920742|gb|EDR37990.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992280|gb|EDR44581.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206681|gb|EDR51161.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962702|gb|EDR58723.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049036|gb|EDR60444.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054982|gb|EDR64782.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752337|gb|ACA69855.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186696996|gb|ACC87625.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229682040|gb|EEO78132.1| isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690752|gb|EEO82806.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696728|gb|EEO86775.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705886|gb|EEO91895.1| isoleucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360601|gb|ACY57322.1| isoleucyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364547|gb|ACY61104.1| isoleucyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270336435|gb|EFA47212.1| isoleucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353030|gb|ADE63371.1| isoleucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016961|gb|ADW00533.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 938

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 131/409 (32%), Gaps = 46/409 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+            +   VQW+ + G   
Sbjct: 395 HVEKLLHSYPCCWRHKTPIIFRATPQWFISMDQKGLRKQS---LQEIKGVQWIPDWGQAR 451

Query: 168 RLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             +   ++          + +P+     +  E +      L +    R     GI+   D
Sbjct: 452 IETMVANRPDWCISRQRTWGVPMSLFVHKETEQLHPRSIELMEEVAKRVE-QDGIQAWWD 510

Query: 224 PQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                               + VW D+ + + +                P D+++ G D 
Sbjct: 511 LDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----VRPEFGGHSP-DMYLEGSDQ 565

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F +    A  +    P  + +     +  +G K+SKS+GN I P +V+ ++G D L
Sbjct: 566 HRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLGGDIL 625

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TP 380
           R ++      G+      + LK+  ++         +  +   +L + +G  P      P
Sbjct: 626 RLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLNGFDPAQHQVKP 678

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-K 437
                 D   +        EI E  +N   H  + +++   S      Y D  K  +   
Sbjct: 679 EEMVVVDRWAVGRAQAAQAEIMEAYENYDFHLVVQRLMQFCSVEMGSFYLDIIKDRQYTA 738

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           K +     +       +   L   +   +   A++I++ L    +   F
Sbjct: 739 KGDGIARRSCQTALFHIAEALVRWMAPIMSFTADEIWNHLPGERQQYVF 787



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 17/207 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRTACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                KI D G ++KG     +     +   + EV Y     Q  + + N V        
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEYYDKTSQSIDVRFNAVDTA-TVAA 224

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
            F +SA    +     +   + LP  R
Sbjct: 225 KFGVSAVNGPISLVIWTTTPWTLPANR 251


>gi|194014535|ref|ZP_03053152.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013561|gb|EDW23126.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 921

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 80/457 (17%), Positives = 150/457 (32%), Gaps = 38/457 (8%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRN-----FRDMADVLDISYDDFIR 96
           GLDV      DE G    +A    G+  +      +            D +  SY    R
Sbjct: 341 GLDV--LCPVDEKGVMTEEAPGFEGLFYEDANKAITEQLEAKGALKKLDFITHSYPHDWR 398

Query: 97  TTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ 153
           T +   +      +   K   +             +  +   +N                
Sbjct: 399 TKKPTIYRATAQWFASIKDFREALLDNIKETKWVPAWGETRLFNMVRDRGDWCISRQRVW 458

Query: 154 HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
             P+         F     +  +      H   +      N         L     +   
Sbjct: 459 GVPI-------PVFYAENGEPIITDETIQHVSQLFREHGSNIWFEKEAKELLPEGFTHPG 511

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G       Q IM VW D+ +++                  PADL++ G D     F+
Sbjct: 512 SPNG--EFTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRGWFN 563

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    A  ++   P    +     +  +G K+SKSLGN IDP +V +++G + LR ++  
Sbjct: 564 SSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTIDPTKVAKQLGAEILRLWV-S 622

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDES 389
            +    D     D LK+   A++   I N   R +   L D++  +         E D+ 
Sbjct: 623 SVNYQADHPVSDDILKQV--AEVYRKIRNTF-RFLHGNLFDFEPAVHAVPVEELREVDQY 679

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPDRAS 445
           IL   ++++ ++++   +         + +   +     Y D  K     +   +PDR  
Sbjct: 680 ILIKLNKLIDKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAKDVVYIEHADHPDR-R 738

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++  V  E +  L  L    +P  A++++  L   +E
Sbjct: 739 SMQTVFYETLMALVKLTAPILPHTADELWSHLSFVEE 775



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D + RF  ++G    +  G D HG  I  A
Sbjct: 45  KGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     R+    L +   +D+   T +  +    
Sbjct: 105 LTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 ILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|78212910|ref|YP_381689.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123743315|sp|Q3AJU8|SYL_SYNSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78197369|gb|ABB35134.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 875

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+   +  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA
Sbjct: 49  EKPGFFALSMFPYPSGSLHMGHVRNYVITDVIARVQRMLGHAVLHPMGWDAFGLPAENAA 108

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
               V    + D+N    R   D L +S D      T    ++   + L+ ++ + G  Y
Sbjct: 109 IERNVDPGEWTDRNIDQMRAQLDRLGLSIDWSREQATCHSDYYRWTQWLFLELLEGGLAY 168

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V    DG+ + +    V+  +   +F R++ Y + LL+  
Sbjct: 169 RKNATVNWDPVDQTVLANEQV--DGDGRSWRSGA-LVEQRQLNQWFLRITDYAEPLLNDL 225

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           ++   +   +            G
Sbjct: 226 DALKGWPERVRTMQANWIGRSEG 248



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 25/214 (11%)

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A+   P+   +   +    EK+SKS  N +DP  VI+  G D  R F++ +    KD  +
Sbjct: 614 ADAEDPRDPNTGDKLEVLFEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEW 673

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
           D   ++ +            + R V       D + P   P   +++D  +       ++
Sbjct: 674 DDADVEGQFR------FLQRLWRLVEAGSARIDSLEPMQRPADLSDADSDVRRALHLAIE 727

Query: 400 EIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + E++     ++ A+++++ L + +              T  D  S    V  E +  L
Sbjct: 728 AVSEDLSDEIQLNTAISELMKLSNAIS------------STGIDALSA--PVLQEALSGL 773

Query: 459 AILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
             LL  F P LA + ++ L  +     + +  LD
Sbjct: 774 VRLLAPFAPHLAEEFWNRLGGSGSVHRQSWPVLD 807


>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 920

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 86/485 (17%), Positives = 163/485 (33%), Gaps = 47/485 (9%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI------ 95
           GLDV      DE G   ++A    G+    + D N    + + +   +   +FI      
Sbjct: 341 GLDV--LCPVDEKGVMTSEAPGFEGMF---YDDANKAITQQLEEKGALMNLEFITHSYPH 395

Query: 96  --RTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             RT +          +   K                    ++  +N             
Sbjct: 396 DWRTKKPTIFRATAQWFASIKDFRTDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQ 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            A   P+         F     +  +      H   +      N         L     +
Sbjct: 456 RAWGVPI-------PVFYAENGEPIITDETIEHVSALFREHGSNIWFEKEAKDLLPEGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G       Q IM VW D+ +++                  PADL++ G D    
Sbjct: 509 HPGSPNG--KFTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR +
Sbjct: 561 WFNSSLSTAVAVTGQAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLW 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTES 386
           +   +    D       LK+   A++   I N   R +   L D+D            E 
Sbjct: 621 V-SSVDYQADVRVSDAILKQV--AEVYRKIRNTF-RFLHGNLFDFDPKANAVAVEDLREV 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPD 442
           D+ IL   ++++ ++++             + +   V     Y D  K     +   +PD
Sbjct: 677 DQYILVKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTVELSSFYLDFAKDVVYIEHADHPD 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ--RLKPGFML 499
           R  ++  V  E +  LA L    +P   ++++  L FV +++     + +   +  G  +
Sbjct: 737 R-RSMQTVFYETLLALAKLTAPILPHTTDELWAHLTFVEEQSVQLTDMPEAVAIPNGEAV 795

Query: 500 HKTFD 504
            + FD
Sbjct: 796 EEKFD 800



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  Q     R+    L +  D      T +  +    
Sbjct: 105 LTKNKKVKRKEMSVAEFRKLCEEYAWQQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|321252035|ref|XP_003192264.1| valine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458732|gb|ADV20477.1| Valine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1109

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 124/385 (32%), Gaps = 57/385 (14%)

Query: 155 NPVQWME-EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
           + V+WME  + +      +       +    E   P    ++     ++  +    ++  
Sbjct: 541 DWVRWMENMQDWCISRQLWWGHRCPAWLLKFEGESPDTSDDKNWIVARTEEEAQEKAKAL 600

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
            +    I +    ++  W  +     +T G+ +        F+P  +   G DIL F   
Sbjct: 601 ANGKNFILEQDDDVLDTWFSSGLWPFSTMGWPNKTP-DMEHFYPNSILETGWDILFFWVA 659

Query: 274 YWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVI-------------- 317
               F  +    +P K+V+ H  +    G K+SKSLGNVIDP++VI              
Sbjct: 660 RMVFFGNTLTDVMPFKEVYCHPMVRDAYGRKMSKSLGNVIDPLDVITGQKLEKLHNDLRM 719

Query: 318 -----------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                                   + G DALR+ L    + G+D   D   ++       
Sbjct: 720 GNLPEKEILKAEEGQKKLFPKGIPQCGTDALRFTLCNYTSGGRDINMDIGRVEG--YRKF 777

Query: 355 ANGIGNLVSRS-VSMILKDY-----------DGMIPTPGAFTESDESILSVCSRVLQEIR 402
            N + N        M L D            +      G     ++ +    +     + 
Sbjct: 778 CNKLWNATKFCLFRMDLVDLQGVRQTSAFVPNASHLPTGKEGLVEKWLFHKLNLASAAVS 837

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++N+    A             D Y +A KP     ++P    +        +     
Sbjct: 838 DALENRDFSEASTVAYQYFLNDLCDVYIEATKPIFEANSDPAAKLSAQNTLYTCLEAGLK 897

Query: 461 LLQAFVPKLANKIFDILFVADENRC 485
           LL  F+P +   ++  L   + + C
Sbjct: 898 LLHPFMPYVTEDLWQRLPRREGDSC 922



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 19/146 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++    I+          HIGHA  + + D L R+ R+ G  VL+  G D  G       
Sbjct: 165 DKGTFCITFPPPNVTGNLHIGHALTVSLQDALIRWKRMQGQTVLYLPGYDHAGIATQAVV 224

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +   + T                   + DQ      +    L     +D    T +    
Sbjct: 225 EQRLMKTEGHSRHYYGREKFLEKVWEWKDQYQGKITNQMTRLGGSFDWDKVAFTMDDNLS 284

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYS 129
              R  + ++ +KG +Y+      + 
Sbjct: 285 TAVREAFVQMHEKGLLYRANRLVNWC 310


>gi|291614548|ref|YP_003524705.1| isoleucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584660|gb|ADE12318.1| isoleucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 962

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 99/274 (36%), Gaps = 17/274 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+   +                 +PADL++ G D     F +       +    P
Sbjct: 568 LDVWFDSGATHFAVLRNRP------ELAYPADLYLEGSDQHRGWFQSSLLTGCAIDGRAP 621

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  KG K+SKS GN I+P ++  ++G D LR ++      G+     ++ 
Sbjct: 622 YRQLLTHGFTVDEKGYKMSKSKGNGIEPQDICNKLGADILRLWIASTDYSGEMS-LSEEI 680

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
           LK+    D    I N + R +   + D+D          + E D   L++  ++   +  
Sbjct: 681 LKRV--TDGYRRIRNTL-RFLLANIADFDMARDAMPVEQWLEIDRYALALTQQLQDAVCG 737

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
           +      H A+ ++    SE     Y D  K        N     +       +   LA 
Sbjct: 738 DYDRYEFHLAVQKLQGFCSEDLGGFYLDILKDRLYTAGENSKARRSAQNALYHIAHALAR 797

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           L+   +     +++  L   D+   F+ L   L 
Sbjct: 798 LVSPILSFTGEEVWATLNGKDDVSVFEQLWYELP 831



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 12/153 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+GHA   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 49  GRPKFILHDGPPYANGDIHLGHAVNKILKDIIVKSKTLAGFDAPYVPGWDCHGLPIELHV 108

Query: 63  QNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           +                + +  +     +     L +   +D    T + +         
Sbjct: 109 EKKHGKGIPPAQFRELCRQYAAEQVAKQKKDFIRLGVLGDWDHPYLTMDFKTEADIIRAL 168

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            KI ++G +Y+G     + L   +   + EV  
Sbjct: 169 GKILERGYVYQGRKPVNWCLDCGSALAEAEVEY 201


>gi|255716872|ref|XP_002554717.1| KLTH0F11946p [Lachancea thermotolerans]
 gi|238936100|emb|CAR24280.1| KLTH0F11946p [Lachancea thermotolerans]
          Length = 1100

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 131/379 (34%), Gaps = 48/379 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E     E   E     ++  +  + + K F          
Sbjct: 561 WCISRQLWWGHRCPVYFVEIEGQEHDEIDGEYWVSGRNLEEAQAKAAKKFPNEKYTLRQD 620

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +  +   ++F+P  +   G DIL F    +      L+ 
Sbjct: 621 EDVLDTWFSSGLWPFSTIGWPEKTE-DMSRFYPFSMLETGWDILFFWVSRMILLGLKLTG 679

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
            +P  K+VF H  +   +G K+SKSLGNVIDP++V+  + ++ L   L+      ++   
Sbjct: 680 EIPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDVVSGISLEDLHAKLLGGNLDPREVEK 738

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I      ++
Sbjct: 739 AKSGQKESYPNGIPQCGTDALRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFAL 798

Query: 367 SMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             +  DY         G  +  ++ IL+  +   + I E ++ +    + + +       
Sbjct: 799 MRLGGDYQPPAEEKLSGNESLVEKWILTKMTDYAKSINEALEKRDFLTSTSGIYEFWYLV 858

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K + + + +     +       +I     L+  F+P ++ +++  L      
Sbjct: 859 CDVYIENSK-YLINEGSEAEKKSAKDTLYILIDNALRLIHPFMPFISEEMWQRLP----K 913

Query: 484 RCFQSLDQRLKPGFMLHKT 502
           R  ++    +K  + ++K 
Sbjct: 914 RSTETSPTIVKASYPVYKK 932



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGH   + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 179 FCIPAPPPNVTGALHIGHGLTISIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQV 238

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + +   +  +   + L  SYD      T       +  
Sbjct: 239 WAKEKKTRHDYGREAFVKKIWEWKEDYHKRIKTQINKLGASYDWSREAFTLSPELSKSVT 298

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ ++G IY+      +S++
Sbjct: 299 EAFVRLHEEGIIYRASRLVNWSVK 322


>gi|222624062|gb|EEE58194.1| hypothetical protein OsJ_09140 [Oryza sativa Japonica Group]
          Length = 977

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 131/385 (34%), Gaps = 47/385 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +  +  +Y    N   W      ++        ++   +         +R     +  
Sbjct: 462 IPQQYEQDWYRWLANIRDWCVSRQLWWGHRVPAWYVVLEDDQENILGSDNDRWVVARNES 521

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           ++ L      +K      ++  DP  ++  W  +    LT  G+ D+    KA F+P  +
Sbjct: 522 EANL---EAHQKYPGKKFELHQDPD-VLDTWFSSGLFPLTVLGWPDDTADVKA-FYPGSV 576

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DIL F    +      L  ++P  K           G K+SKSLGNVIDP++VI 
Sbjct: 577 LETGHDILFFWVARMVMMGMQLGGDVPFQKVYLHPMIRDAHGCKMSKSLGNVIDPVDVIN 636

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKK--------------------------RVNA 352
            + ++ L   L        +     DG KK                          ++N 
Sbjct: 637 GIPLEGLLKRLEEGNLDPNELNIASDGKKKDFPDGIAECGTDALRFALVSYTSQSDKINL 696

Query: 353 DL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIR 402
           D+          N +  ++   +         P   +        + ILSV ++ + +  
Sbjct: 697 DIKRVVGYRQWCNKLWNAIRFAMGKLGDHYTPPATISVTIMPPICKWILSVLNKAIGKSV 756

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV-IRQL 458
            +++      A + + S       D + +A KP+    +   + A       + V +   
Sbjct: 757 TSLEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQELESARAASRDALWVCLDTG 816

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             LL  F+P +  +++  L    ++
Sbjct: 817 LRLLHPFMPCVTEELWQRLPQPKDS 841



 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y+           HIGHA  + I D + R+ R+ G + L+  G D  G       +  
Sbjct: 144 RYYVL-PPPNVTGALHIGHALTVAIEDAIIRWRRMSGYNALWVPGVDHAGIATQVVVEKK 202

Query: 66  GVTTKVFVDQ 75
            +  K     
Sbjct: 203 LMREKKLTRH 212


>gi|281424358|ref|ZP_06255271.1| isoleucine--tRNA ligase [Prevotella oris F0302]
 gi|281401627|gb|EFB32458.1| isoleucine--tRNA ligase [Prevotella oris F0302]
          Length = 1211

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/340 (16%), Positives = 122/340 (35%), Gaps = 41/340 (12%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    V      +       + G  +  +   ++ VW D+ +       Y  
Sbjct: 623 FVPGDYSKENYDKVDLHRPYVDDIVLVNEAGEPMKRESD-LIDVWFDSGSMPYAQQHYPF 681

Query: 247 NPDGSKAK----------------------------FWPADLHVIGKDIL--RFHAIYWP 276
             + +                               ++PAD    G D     F  ++  
Sbjct: 682 EGEIAPEGLKATGKSEDEYRRELVTSTYEGIPVPPAYYPADFINEGVDQTRGWFFTLHAI 741

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + ++  ++     + +   +  KG K+SK +GNV +P E+I++ G D +R++++      
Sbjct: 742 STMVFDHVAFKNVISTGLVLDAKGNKMSKHVGNVTNPFEMIDKYGADPVRFYMMTNSEPW 801

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---ESDESILSV 393
            +  +D +G+ +     L   + N  S        D         A     E D  I+S 
Sbjct: 802 DNLKFDPNGVDE-TRRKLFGTLYNTYSFFALYANVDGFNSEAEQVALENRPEIDRWIISK 860

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLY 449
            + +++ +   ++N    RA   + + V++   + Y   + ++ W  + +  D+ S    
Sbjct: 861 ANTLIKGVERELENFDPTRAGRLIDAFVNDDLSNWYVRLNRKRFWGTEMSE-DKLSA-YQ 918

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                +  +A LL  F P  A++++  L    E+      
Sbjct: 919 TLYTCLMTVAKLLAPFAPFYADELYHDLGGKLESLHLDHF 958



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 70/240 (29%), Gaps = 30/240 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMKGYQVHRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V   +  +R++ + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASQKYISTEDYNKKCRENVMMFTAEWRELTEKMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           ++ +T   L K++ +KG +YKG     YS       +  E+     G Y + +   V   
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHEL--NQPGCYRDVKDTTV--- 215

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +  +    +               P    + V   V   +  +++       G  +
Sbjct: 216 -TAQFLIKDPKAEWTKHGKPYFIAWTTTPWTLPSNVALCVGPKIDYVAVETYNLYDGQPV 274


>gi|294943524|ref|XP_002783900.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
            ATCC 50983]
 gi|239896731|gb|EER15696.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
            ATCC 50983]
          Length = 1213

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 68/449 (15%), Positives = 149/449 (33%), Gaps = 34/449 (7%)

Query: 52   DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD----MADVLDI-SYDDFIRTTEKRHHDTC 106
            DE G+   +     G+  K        + +     + + ++I SY    R+     +   
Sbjct: 653  DESGRFTEEVPPYKGMHVKEADKYIKEDMKKRGLLLHNGMEIHSYPHCWRSDTPLIYRAI 712

Query: 107  RILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + K+ +  D      +        +++  + N     +            P+     
Sbjct: 713  GSWFIKVEEVRDQLLANNEKSTWVPRHVQEGRFKNWLADARDWGVSRNRYWGTPIPIWAS 772

Query: 163  EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
            + Y   +       L  Y  HP   +     +++    K+G   L               
Sbjct: 773  DDYQEIVCIGSVAELEEYAGHPIPDIHRHFIDDIKIPSKTGRGYLHR------------- 819

Query: 223  DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
                +   W ++ +       Y         + +PAD    G D     F+ +   A  L
Sbjct: 820  -VDEVFDCWFESGSMPYAQVHYPFENKEKFEENFPADFVAEGLDQTRGWFYTMTVIATHL 878

Query: 281  SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
                     + +   +   G+K+SK L N  DP EV +  G DA+R ++        +  
Sbjct: 879  FNQPAFKNLIVNGLILAADGKKMSKRLKNYPDPTEVFDRYGADAVRMYMCNSPVVRAEPL 938

Query: 340  FYDKDGL---KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILS 392
             + ++G+    K V   L N    LV  +     ++    +P       +   +D  I +
Sbjct: 939  KFREEGVRDTVKEVFLPLYNAYRFLVQETCRFEKQENTKFVPDRAYIHKSTNPTDHWIYA 998

Query: 393  VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVT 451
                +L+  R  +++  ++  + +++S + ++ + Y    +       + +     L   
Sbjct: 999  TSQELLKYTRTELESYRLYTIVGKLVSFLDDLTNWYIRMNRDRMRGGVDKENTLESLNTL 1058

Query: 452  VEVIRQLAILLQAFVPKLANKIFDILFVA 480
             +V+  L I+L    P +   I+  L +A
Sbjct: 1059 YDVMLNLTIVLAPITPFITEHIYQNLRLA 1087



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 20/166 (12%)

Query: 1   MKEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E +  Y+      +    PH GH     I DV+ R+    G  V    G D HG  + 
Sbjct: 327 MSEGKPDYVFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQTGHHVERRFGWDCHGLPVE 386

Query: 60  KAAQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
                                      +  V + ++ +R++       I +D+  +T ++
Sbjct: 387 HEIDKDHNIGSKSDVMKWGIANYNEACRSIVTRYTKEWREIVTRFGRWIDFDNDYKTMDR 446

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              +T   ++K++ DKG +Y+      YS       ++ EV +G  
Sbjct: 447 NFMETVWWVFKQLFDKGLVYRAFRVMPYSTALCTPLSNFEVAQGYK 492


>gi|238758979|ref|ZP_04620150.1| Isoleucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238702790|gb|EEP95336.1| Isoleucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 913

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 117/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  E +    + L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSTELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDTAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----DRPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI    +N   H  + +++   S      Y
Sbjct: 668 GFDPALDQVKPEEMVVVDRWAVGRAQAAQAEIMAAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNQL 778



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGDKVSAAEFRTACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|134295511|ref|YP_001119246.1| valyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134138668|gb|ABO54411.1| valyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 955

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 126/399 (31%), Gaps = 92/399 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    S     +P         +++  ++D  +SR+   WG +IP
Sbjct: 372 PEGTFNPGKSITETSLDVVRSGQIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 429

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 430 AWYGENGEVFVARNEDDARAQAAARGYTGALKRDEDVLDTWFSSALVPFSSLGWPNQTP- 488

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 489 ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDAEGQKMSKSKG 548

Query: 309 NVIDPIEV-------------------------------------IEEVGVDALRYFLVR 331
           N +DPI++                                     I   G DALR+ +  
Sbjct: 549 NTLDPIDIVDGIDLETLVAKRTTGLMNPKQAATIEKKTRKEFPDGIPAFGTDALRFTMAS 608

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---------- 381
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 609 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGADKPEVCGAGDCGPG 665

Query: 382 ---AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ +D  I+S+  R   +I +   +         +   V +   D Y +  K  ++
Sbjct: 666 GYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWYLELAKV-QI 724

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           +   P++        + V+  +  L    +P +   ++ 
Sbjct: 725 QNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 763



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G        
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 60  ---------------KAAQNAGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                          +         K       +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKEKSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++  + ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVTLYEQGLIYRGKRLVNWDPVLLTAVSDLEVASEEENGHLWHIRYPL 208


>gi|229916464|ref|YP_002885110.1| leucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467893|gb|ACQ69665.1| leucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 801

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E++  Y+     YP+    H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 31  EKDCFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGYNVLHPIGWDAFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F  +N   FR     L  SY  D  I TT+ +++   + ++ ++ ++G  
Sbjct: 91  ALDTGNDPREFTARNIETFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLFERGLA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++EV  G         ++PV  +  + +  R++ Y ++LL  
Sbjct: 151 YVDEVAVNWCPALGTVLANEEVIDG----LSERGNHPVYRVPMKQWVLRITEYAERLLED 206

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 207 LEGLDWPESVKEMQRNWI 224



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 100/268 (37%), Gaps = 47/268 (17%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+         D  K K W P DL++ G +    H +Y   +    
Sbjct: 493 PQWAGSCW--YYIRYIDPDNEEMIADPEKLKRWLPVDLYIGGTEHAVLHLLYARFWHKVL 550

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +  + P  K       +    EK+SKS GNV++P ++++  G D LR + +    
Sbjct: 551 FDIGVVPTSEPFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHGADTLRLYEMFMGP 610

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL         +G    + R   +    +D       A T          
Sbjct: 611 LDAAIAWSTNGL---------DGARRFLDRVWRL----FDQTNFADVAPTA---DFERTY 654

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ +    + A++Q++  V+E ++      P         ++  V ++    
Sbjct: 655 HQTVKKVTEDYEALRFNTAISQLMVFVNEANK--QETLP---------KSQMVDFI---- 699

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE 482
                 +L    P L+ ++++ + + +E
Sbjct: 700 -----KMLSPVAPHLSEELWEKMGMTEE 722


>gi|225164049|ref|ZP_03726334.1| leucyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224801355|gb|EEG19666.1| leucyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 278

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 8/203 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    HIGH       D++AR+ R  G +VL   G D  G    + A
Sbjct: 42  KPKYYVLDMFPYPSGAGLHIGHPEGYTATDIIARYKRARGYNVLHPIGWDAFGLPAEQHA 101

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G         N  NFR     L  SYD    I TT+ R+    + ++ ++  +G  Y
Sbjct: 102 VKTGTHPASNTQNNIANFRRQIKALGFSYDWEREIDTTDPRYFKWTQWIFLQLFKRGLAY 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W+         ++E+  G           PV+      +  R++AY ++LLS  
Sbjct: 162 VDERPVWWCPELRTVLANEEIVDGKSEVGGF----PVERRNLRQWVLRITAYAERLLSDL 217

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++    +R  E       G
Sbjct: 218 KD-VDWPDSTKRMQEAWIGRSEG 239


>gi|311895530|dbj|BAJ27938.1| putative isoleucyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 1043

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 125/387 (32%), Gaps = 15/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +   ++  E    +        G++ +  +N + W  
Sbjct: 393 PHCWRCHTALLYYAQPSWYIRTTAVKDAMIRENEATNWYPETVKHGRFGDWLNNNIDWAL 452

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    + H   +  + + +E+    +SGL           +     
Sbjct: 453 SRNRYWGTP---LPIWRCADDHLTCVGSLAQLSELTGTDQSGLDPHRPYIDEVTFPCPQC 509

Query: 222 DDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    ++  W D+ +      GY         K +PA       D     F+ +  
Sbjct: 510 SATAVRVPEVIDAWYDSGSMPFAQYGYPYRNKELFEKRYPAQFISEAIDQTRGWFYTLMA 569

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 570 VGTLVFDRNSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 629

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P      D  +LS 
Sbjct: 630 WSARRVGHGTIQEVVRKTLLTYWSTVSFQALYARAAGWSPSANDPAPADRPVLDRWVLSE 689

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + +++E+    +     RA   +   V ++  ++  +      + +    +T      E
Sbjct: 690 LNTLVREVDAAYEAYDTQRAGKLLSGFVDDLSNWYVRRGRRRFWQGDAAALAT----LHE 745

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
            +  +  L+    P +  +I+  L V 
Sbjct: 746 ALETVTRLMAPLTPFITERIWQDLVVP 772



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 39  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMKGYHVARKAGWDCHGLPVELA 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  D   RT +  +
Sbjct: 99  VEKELGFSGKPDIEKYGIAEFNAKCRESVTRHTDAFAELTTRMGYWVDLDQAYRTMDPSY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     ++I DKG + +      +  R     +D E+ +G +
Sbjct: 159 VESVWWSLQQIFDKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 202


>gi|313226866|emb|CBY22011.1| unnamed protein product [Oikopleura dioica]
          Length = 880

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y  +   +    +PA     G D     F+ +   +  L    
Sbjct: 524 VFDCWFESGSMPYAQKHYPFDNKKAFEDTFPAHFIAEGIDQTRGWFYTLIVLSTHLFGKA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC-GKDGFYDK 343
           P    + +   +   G K+SKS  N  DP  + ++ G DA+R +L+  +A  G D  + +
Sbjct: 584 PFKNVIVNGLVLAEDGNKMSKSKRNFPDPKLLFDKYGADAIRLYLISSVAVAGGDLRFKE 643

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPG----AFTESDESILSVCSR 396
             +K+ +        N    LV   +   +         P     +    D+ ILS    
Sbjct: 644 QEVKEMIRDVFLPWYNAYRFLVQNILRHQIDTNSTFTYDPALIGTSDNIMDKWILSYSQS 703

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ ++E M+   ++R + +++  V ++ + Y    +     +T  +     L     VI
Sbjct: 704 LIKSVKEEMETYQLNRVVPKLLKFVDQLTNWYVRLNRRRLKGETGAEDCVHALTTLYTVI 763

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  L+    P L   ++  L
Sbjct: 764 DWMNRLMAPATPFLTEHLYQNL 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +          +   +PH GH     I D + R+   +G  V    G D HG  +   
Sbjct: 38  KGKPPYVFYDGPPFATGKPHYGHLLAGTIKDTVTRYWHQNGYHVERRFGWDTHGLPVEHE 97

Query: 62  AQNAGVTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                  T                 +  V + S  ++D  D +   I +++  +T     
Sbjct: 98  IDKTHGITGPEDVAKMGIDKYNALCRSIVMRYSGEWKDTVDRIGRWIDFENDYKTLYPWF 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++  KG +Y G     +S       ++ E  +   
Sbjct: 158 MESVWWVFKQLFSKGLVYHGQKVMPFSTACNTPLSNFEAGQDYK 201


>gi|239814307|ref|YP_002943217.1| valyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239800884|gb|ACS17951.1| valyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 959

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 130/417 (31%), Gaps = 96/417 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLS-------AYQDKLLSYYESHPEFILPIERRNEVISFV 200
                    V+ M  + ++  ++       +   K +   ++     +P    N   +  
Sbjct: 362 PRCARSGAIVEPMLTDQWYVAMTRPGADGTSIAQKAIDVVKTGEVRFVPENWVNT-YNHW 420

Query: 201 KSGLKDLSLSRKTFDWG--IKIPDDPQY-------------------------IMYVWID 233
              ++D ++SR+   WG  I    D                            ++  W  
Sbjct: 421 MENIQDWTISRQ-LWWGHQIPAWYDEDGKVYVAHDEAEAQAKAPGKTLRRDEDVLDTWYS 479

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +     ++ G+ +  +   A + P+ + V G DI+ F    +       +  +P      
Sbjct: 480 SALVPFSSLGWPEKTE-DLALYLPSTVLVTGYDIIFFWVARMIMMTKHFTGKVPFKDVYI 538

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEE-------------------------------- 319
                  +G+K+SKS GNV+DP+++I+                                 
Sbjct: 539 HGLVRDAQGKKMSKSEGNVLDPVDLIDGIALPELLDKRTQGLRKPETAPAVRKNTQKEFP 598

Query: 320 -----VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
                 G DALR+      + G+   +D    +     +  N + N  +R V M  +  D
Sbjct: 599 DGIPAFGADALRFTFASLASLGRSINFDSKRCEG--YRNFCNKLWN-ATRFVLMNCEGQD 655

Query: 375 GMIPTPGA--------------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +                   F+ +D  I S   RV  E+ +  +   +      +   
Sbjct: 656 CGLREHTKEECAVGGPAYGYLKFSRADFWIASQLQRVEAEVAKGFEEYRLDNVANAIYQF 715

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +   D Y +  K  +++  +  +        +  +  L  L    +P +  +++ 
Sbjct: 716 AWDEFCDWYLEIAKV-QIQTGDDAQKRATRRTLIRTLEALLRLAHPVIPFITEELWQ 771



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 22/171 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAA 62
             I           H+GHA+   I D LAR+HR+ G + L+  GTD  G      + +  
Sbjct: 56  FAIQLPPPNVTGTLHMGHAFNQTIMDSLARYHRMKGDNTLWVPGTDHAGIATQIVVERQL 115

Query: 63  QNAGVTTKVFVDQNS----------------RNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           Q   ++      +N                    R M D +D S + F  T ++      
Sbjct: 116 QEQKISRHDLGRKNFVARVWEWKEKSGNTITEQMRRMGDTVDWSREYF--TMDEDLSKVV 173

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              +  + ++G IY+G   G +    +   +D EV    +         P+
Sbjct: 174 TQTFVSLYEEGLIYRGKRLGNWDPVLKTSVSDLEVESEEEDGSLWHIAYPL 224


>gi|221065739|ref|ZP_03541844.1| valyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220710762|gb|EED66130.1| valyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 967

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 121/376 (32%), Gaps = 66/376 (17%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFI---LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E +    + + + +  +  S   +    +P     E   +V     +          G 
Sbjct: 410 PENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEEGNIYVAKNEAEAQAQADRIAPGK 469

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF---WPADLHVIGKDILRFH--AI 273
           K+  D   ++  W  +     +T G+ +  + +   +    P+ + V G DI+ F    +
Sbjct: 470 KLTRDAD-VLDTWYSSAMVPFSTMGWPEQGNAADDDYNLYLPSSVLVTGYDIIFFWVARM 528

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
              +   +  +P             +G+K+SKS GNV+DP+++I+               
Sbjct: 529 IMMSTHFTGRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGISLEPLLEKRTTGL 588

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+      + G+   +D    +     +  N
Sbjct: 589 RKPETAPQVRKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCN 646

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEIR 402
            + N  SR V M  + +D  +                   F++ D  I S   +V  E+ 
Sbjct: 647 KLWN-ASRFVLMNCEGHDCGLAPHTKEQCQPGGEFAGYMHFSQPDRWIASQLQKVEAEVA 705

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +      +      +   V     D Y +  K  +++  N  +        +  +  +  
Sbjct: 706 KGFAEFRLDNVANAIYDFVWNEFCDWYLEIAKV-QIQTGNEAQQRATRRTLIRTLEAILR 764

Query: 461 LLQAFVPKLANKIFDI 476
           L    +P +  +++  
Sbjct: 765 LAHPVIPFVTEELWQQ 780



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 22/179 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R+HR+ G +  +  GTD  G       
Sbjct: 49  TQPSFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGTDHAGIATQIVV 108

Query: 63  QNAGVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
           +    T            F  +                R M D +D S + F  T + + 
Sbjct: 109 ERQLQTQGVSRYDLGRDEFTKKVWEWKEQSGNTITTQMRRMGDTVDWSREYF--TMDDKL 166

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                  + K+  +G IY+G     +    ++  +D EV              P+   E
Sbjct: 167 SKVVTETFVKLYQQGLIYRGKRLVNWDPVLQSAVSDLEVENQEKDGSLWHIAYPLTSGE 225


>gi|195380978|ref|XP_002049233.1| GJ20865 [Drosophila virilis]
 gi|194144030|gb|EDW60426.1| GJ20865 [Drosophila virilis]
          Length = 1048

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 119/384 (30%), Gaps = 48/384 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V +     +Y+       W      ++        +     S        E+   V    
Sbjct: 492 VPEHHTKTWYHWMDGIRDWCVSRQLWWGHRIPAYHVSFKESSIQPSTSEEEQYWIVARTE 551

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +  L   S         I +  D   ++  W  +     +  G+ DN    +A F+P  L
Sbjct: 552 QEALSKASERFGLDPSLILLKQDED-VLDTWFSSGLFPFSVFGWPDNTPDLQA-FYPTSL 609

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI- 317
              G DIL F    + +    L   LP  +           G K+SKSLGNVIDP++VI 
Sbjct: 610 LETGHDILFFWVARMVFFGQKLLGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPMDVIR 669

Query: 318 ------------------------------------EEVGVDALRYFLVREIACGKDGFY 341
                                                E G DALR+ L   I   +D   
Sbjct: 670 GISLEGLHEQLIGSNLDPREIEKAKLGQKQDYPQGIPECGSDALRFALCAYITQARDINL 729

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKD--YDGMIPTPGAFTESDESILSVCSRVLQ 399
           D + ++        N + N    ++     D  Y+  +       + D  ILS  +  ++
Sbjct: 730 DINRVQG--YRFFCNKLWNATKFALLYFNGDELYNTQLTLTEHSNKMDAWILSRLAATIE 787

Query: 400 EIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
                          +   +       D Y +  KP   +  + ++ +         +  
Sbjct: 788 TCNAGFDTYDFAAVTSACYAFWLYDVCDVYLECLKP-IFQSGSAEQQAAARRTLYVCLDY 846

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
              LL  F+P +  ++F  L  AD
Sbjct: 847 GLRLLSPFMPFITEELFQRLPRAD 870



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 21/145 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+ R+ G   L+  G D  G       +  
Sbjct: 129 KFIMVIPPPNVTGSLHLGHALTNAIEDAITRYQRMKGRTTLWVPGCDHAGIATQVVVEKL 188

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDT 105
                                  +  +      D    L  SYD + R   T + +    
Sbjct: 189 LWRDEGLSRHDLGREKFIERIWNWRREKGDRIYDQLKALGSSYD-WTRVNFTMDPKLCRA 247

Query: 106 CRILWKKISDKGDIYKGCYSGWYSL 130
               + ++ ++G IY+      +S 
Sbjct: 248 VTEAFVRLHEQGAIYRSSRLVNWSC 272


>gi|111221641|ref|YP_712435.1| isoleucyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111149173|emb|CAJ60856.1| isoleucyl-tRNA synthetase [Frankia alni ACN14a]
          Length = 1078

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 79/484 (16%), Positives = 145/484 (29%), Gaps = 54/484 (11%)

Query: 38  HRLDGLDVLFTTGTD----------------EHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
            R  GL V+   GTD                +    +    +  G   +     +S    
Sbjct: 372 CRAAGLPVVNPIGTDGRFLADTPLVGGLFFKDADAPLTADLRERGRLWRGLTFTHSYPHC 431

Query: 82  DMADVLDISY---DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
                  I Y     +IRTT  R     +        +    K    G +   +  +   
Sbjct: 432 WRCHTPLIYYPLPSWYIRTTAIREQLLAQNEATDWHPE--RIKTGRYGEWLRGNVDWALS 489

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
              Y G     +    +P   M   G    LS    + L+  + H  F+           
Sbjct: 490 RNRYWGTPLPIWRCDDDP-DHMVCVGSIAELSELAGRDLATLDPHRPFVD---------- 538

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                     ++      G      P+ ++ VW D+        G         A+ +PA
Sbjct: 539 ---------EVTISCPACGATAHRVPE-VIDVWYDSGAMPFAQWGAPHQNADDFARQYPA 588

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
                  D     F+ +     L+         +     +  +G K+SK +GNV+DP E+
Sbjct: 589 QYICEAIDQTRGWFYTLMAIGTLVFDRSSYETVLCLGLLLDAEGRKMSKHVGNVLDPFEL 648

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI-----LK 371
            E  G DA+R+ ++   +   D     + ++  V   L     N  S             
Sbjct: 649 FERHGADAVRWLMLAGGSPWADRRVGHEAIEDIVRKVLL-TYWNTASFFALYAGAAGWHP 707

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
                   P      D   LS  +  + E+ E++      RA  ++   + ++  ++  +
Sbjct: 708 GAGPAAAAPAERHVLDRWALSELAATVTEVDESLAGFDSLRAGRRIARFIDDLSNWYVRR 767

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
                   +PD  +T        +  L  ++  F P L + ++  LF         S+  
Sbjct: 768 SRRRFWAGDPDALTT----LYTCLDALTRVMAPFTPFLTDWLWARLFADASPTAPDSVHL 823

Query: 492 RLKP 495
              P
Sbjct: 824 AAWP 827



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 23/154 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT- 69
               N +P  H  H    +  D+  R+  + G  V    G D HG  +  A +     T 
Sbjct: 76  PPTANGKPGAH--HVEARVFKDLFPRYRTMKGFHVPRRAGWDCHGLPVELAVEKELGFTS 133

Query: 70  ----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +  V ++  +F  M + +   +  D   RT +  + ++     K
Sbjct: 134 KNDIEAYGIAEFNARCRESVLRHVADFSAMTERMGYWVDLDSAYRTMDTSYIESVWWSLK 193

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           +I DKG + +      Y  RDE   +D EV +G 
Sbjct: 194 QIFDKGLLVEDFRVTPYCPRDETPLSDHEVSQGY 227


>gi|320101257|ref|YP_004176849.1| valyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753609|gb|ADV65367.1| valyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 815

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 122/397 (30%), Gaps = 28/397 (7%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLLSY 179
           +           E +    E               P +   +   +   +S         
Sbjct: 355 RCKTPIQIVNSKEWFLKQLEFKDALLKLIEQIDFKPPLHKRKLVDWVNSVSTDWPISKDR 414

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWI 232
           Y +    +    R    I   + G                +   P+        +   W 
Sbjct: 415 YYATEIPLWRCSRCG-SILLPEPGRYYRPWRDPAPWDKCPVCGAPRESLVGESKVFDTWF 473

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKV 290
           D+  + L  T Y+ NP     K +   L   G+DI+R    Y     + L+         
Sbjct: 474 DSSISVLYVTHYMRNPA-LFEKAFKHTLRPQGQDIIRTWLYYSLLRVYQLTGKPAFKWVR 532

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            +   +  KGE + KS GNVIDP   IE+ G DA RY+       G D  + +  L  R 
Sbjct: 533 ITGMGLDEKGEAMHKSKGNVIDPDPFIEKYGADAFRYWAAASAKLGYDYRFSEQTL--RT 590

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
               A  + N+     S          P      E D++ L+   RVL+++ +      +
Sbjct: 591 GLLFATKLWNIARYISSF-------PEPVDYELREIDKATLAYLGRVLEKVDKAYSELDV 643

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAF 465
           +  + ++           Y +  K     +             Y     ++ +   L   
Sbjct: 644 YEPVNELYQFTWNYFASHYIELTKSRAYNREGKYSELEQKAAWYTLHYTLKAVLRALAPI 703

Query: 466 VPKLANKIFDILFVA--DENRCFQSLDQRLKPGFMLH 500
           +P + + I+  L+       R  + L++ LK    L 
Sbjct: 704 MPFITDAIYRELYGRSVHTERFPEPLEEHLKQPHDLV 740



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 19/165 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE + I T   Y + + H+G A      D++AR+ R+ G +VL     D +G  +    +
Sbjct: 42  REIIAIDTPPPYASGKWHVGGAAHYAQIDMVARYFRMKGYNVLVPFYADRNGLPVEVQVE 101

Query: 64  NA--------GVTTK----------VFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHD 104
            A          T +           F+D+  R+   +   L  S+  +   T  + +  
Sbjct: 102 KAYKVNPHKLSSTPEGREHFLKLCREFLDKAERDIVSVWRRLGCSFQYWKNGTDSEEYRR 161

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             +  + ++  KG IY+      +  R      D E+    +  Y
Sbjct: 162 ITQATFIELYKKGLIYEAERPVNWCPRCRTSLADAELEYVEEDTY 206


>gi|160947731|ref|ZP_02094898.1| hypothetical protein PEPMIC_01666 [Parvimonas micra ATCC 33270]
 gi|158446865|gb|EDP23860.1| hypothetical protein PEPMIC_01666 [Parvimonas micra ATCC 33270]
          Length = 809

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 7/183 (3%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++EK Y      YP+ Q  H+GH       DV++R  RL+G +VLFT G D  G    
Sbjct: 33  INDKEKFYPLIEFPYPSGQGLHVGHPRPYTAMDVVSRKRRLEGQNVLFTMGWDAFGLPTE 92

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
             A    +  ++    N  NF+     +  S+  D  I TT+  ++   + ++ K+ +KG
Sbjct: 93  NYAMKNKIHPEIVTKNNIANFKKQLKRIGFSFDWDREINTTDPEYYKWTQWIFMKMFEKG 152

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             YK      +    +   +++EV     G       + V    +  +  +++ Y D+L+
Sbjct: 153 LAYKMEMPINFCTSCKVGLSNEEVV----GGCCERCGSEVIHKVKNQWMLKITEYADRLI 208

Query: 178 SYY 180
              
Sbjct: 209 DDL 211



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 127/371 (34%), Gaps = 59/371 (15%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+ + E+ G+           L   ES           +++  F   
Sbjct: 426 WVFSRQRYWGEPIPLVYCEKCGWVAIPEEELPLKLPELESFEPTETGESPLSKIDEF--- 482

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-ADLH 261
               ++ +        K   D              Y+      +       K++   D +
Sbjct: 483 ----VNCTCPKCGGKAKRETDTMPQWAGSSWYYLRYMDPNNKENLVGKDALKYFNQVDWY 538

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             G +    H +Y   +         ++   P  K+      +   GEK+SKS GNV++P
Sbjct: 539 NGGMEHTTLHLLYSRFWHKFLYDIGVVNTKEPYLKRTSHGMILGENGEKMSKSRGNVVNP 598

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E+I++ G DALR + +      +   +   G+         NG    + R   +     
Sbjct: 599 DEMIDKYGADALRCYEMFLGDFERSASWSDGGI---------NGCRKFLDRVWKL----- 644

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                   +  E  +S+     + ++++ E+ ++   + A+A +++L+   + ++     
Sbjct: 645 ---QEITNSSEEMTKSLEKSIHKTIKKVSEDFESLKFNTAIAALMTLI---NEFY----- 693

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL 493
                       +V  ++ E +R   ILL    P +  +I++ +           + ++ 
Sbjct: 694 ------------SVKEISREDLRIFLILLNPVSPHITEEIWEEMNFGG------YIFEQT 735

Query: 494 KPGFMLHKTFD 504
            P +   KT D
Sbjct: 736 WPKYDEVKTID 746


>gi|330836072|ref|YP_004410713.1| leucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329747975|gb|AEC01331.1| leucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 843

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+A+  H+GH       D+  RF R++G +VL   G D  G      A 
Sbjct: 39  KRQYVLDMFPYPSAEGLHVGHPEGYTATDIYCRFLRMNGYNVLHPMGFDSFGLPAETYAL 98

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +V  + +  NFR     L  SY  D  I T E  ++   + +++++   G  Y+
Sbjct: 99  KTGIHPRVTTEASIANFRKQIKSLGFSYDWDREISTHEPEYYRWTQWIFEQLYKMGLAYE 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +   D A  +++EV +G           PV       +  +++AY D+L+   +
Sbjct: 159 SEMPVNWCSHDNAVLSNEEVKEG----RCERCGTPVIRRNIRQWVLKITAYADRLIDDLD 214

Query: 182 SHPEFILPIERRNEVISFVK 201
                    + +   I   +
Sbjct: 215 GLDWPESVKQMQRNWIGRSE 234



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 98/296 (33%), Gaps = 81/296 (27%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      YL              ++W P DL+V G +    H +Y   +    
Sbjct: 500 PQWAGSCW--YFLRYLDPHNSERFVSKEAEEYWMPVDLYVGGAEHAVLHLLYARFWHKVL 557

Query: 280 -----LSANLPLPKKVFSHGFI-------------------LHKGE-------------- 301
                +S   P  + V                         L  G               
Sbjct: 558 YDLGHVSTKEPFQRLVNQGMITSFAYQRPDKSLVPTDMVEELPDGSFMEKQTGIALERVI 617

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSL NVI+P +++ E G D +R + +      +   +    L          GI  
Sbjct: 618 AKMSKSLKNVINPDDIVREYGADTMRMYEMFMGPLRESKPWATTSLI---------GIWR 668

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R    + +D       P A       +L    + ++++  + +    + A++Q++ L
Sbjct: 669 FLDRIWR-LHEDRAISEEAPSA------ELLKTLHKTIKKVTTDTEALNFNTAISQMMVL 721

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V+E+ +                       +  EV   L +LL  +VP +A ++++ 
Sbjct: 722 VNEMYK--------------------CDVLPREVWESLLLLLSPYVPHIAEELWER 757


>gi|193794302|gb|ACF21363.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794460|gb|ACF21442.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAIEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|121719781|ref|XP_001276589.1| valyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119404801|gb|EAW15163.1| valyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 1057

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/462 (16%), Positives = 137/462 (29%), Gaps = 75/462 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQ-----HNP 156
             D    + + + +KG   K   +     R     +  E            +        
Sbjct: 428 RFDARYKVVEMLKEKGLYVKWENNPMKIPRCAKSNDVIEPIMKPQWWMRMKELAEPAIKA 487

Query: 157 VQWMEE-------EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           V+  E        E  +FR     +      +       P                +L +
Sbjct: 488 VEDGEIVIKPESAEKNYFRWMRNINDWCLSRQLWWGHQAPAYFVKIEGENGDDSDGNLWV 547

Query: 210 SRKTFDWGIK------------IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           + +T +   K            +  DP  ++  W  A     +T G+           +P
Sbjct: 548 TGRTEEEAHKKAEAKFPGKTFSLVRDPD-VLDTWFSAGLWPFSTLGWPRKTH-DLENLYP 605

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
             +   G DIL F    +      L+  +P  K+V+ H  I   +G K+SKSLGNVIDP+
Sbjct: 606 TSVLETGWDILFFWVARMIMMGIKLTGKVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPL 664

Query: 315 EVI-------------------------------------EEVGVDALRYFLVREIACGK 337
           +V+                                      E G DALR+ LV     G 
Sbjct: 665 DVMEGIELQSLHDKLLVGNLAEKEVATATKYQKKAFPKGIPECGADALRFALVSYTTGGG 724

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCS 395
           D  +D   +         N I       +  +  D+  +      G  + S+  IL   +
Sbjct: 725 DIAFDVQVI--HGYRRFCNKIYQATKFVLGKLGDDFKPLPAPSKTGRESLSERWILHKFN 782

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-TVLYVTV 452
              +E+ E +  +    A + +         D + +  K + L    P     +      
Sbjct: 783 IAAKEVNEALAQRDFSVAASTIYQYWYAQLCDVFIENSK-YLLAPEVPAEVQESAKQTLY 841

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             +     L+   +P +   ++  L    ++     +  R  
Sbjct: 842 TALEGALTLIHPIMPFVTEHLWQRLPRRPDDETISIMKARYP 883



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K + + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 127 KVKPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWERMKGKTTLWLPGMDHAGISTQ 186

Query: 60  KAAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                         + DQ   N ++    +  S+D      T + 
Sbjct: 187 SVVEKMLWKLEKKTRHDLGRAELTKRVWAWKDQYHANIKNALQRVGGSFDWSREAFTMDP 246

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 247 NLSAAVTETFVRLHEEGIIYRANRLVNWC 275


>gi|119583215|gb|EAW62811.1| isoleucine-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 1055

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 194 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 246

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 247 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 306

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 307 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 363

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 364 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 423

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 424 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 483

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 484 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 543

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 544 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 603

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 604 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 643


>gi|41351160|gb|AAH65552.1| IARS protein [Homo sapiens]
          Length = 1055

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 194 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 246

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 247 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 306

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 307 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 363

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 364 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 423

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 424 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 483

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 484 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 543

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 544 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 603

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 604 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 643


>gi|119583216|gb|EAW62812.1| isoleucine-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 1152

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 239 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 291

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 292 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 351

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 352 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 408

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 409 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 468

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 469 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 528

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 529 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 588

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 589 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 648

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 649 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 688


>gi|121608022|ref|YP_995829.1| valyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121552662|gb|ABM56811.1| valyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 972

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/410 (14%), Positives = 116/410 (28%), Gaps = 80/410 (19%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            +          +  +    +               +  +   +   +    G  +  D 
Sbjct: 418 NWVNTYDQWLNNIQDWCISRQLWWGHRIPAWYDEDGRVIVARSAAQAQALAPGKTLRRDE 477

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDG-----SKAKFWPADLHVIGKDILRFH--AIYWPA 277
             ++  W  A     +T G+ D             + P+ + V G DI+ F    +    
Sbjct: 478 D-VLDTWYSAALLPFSTMGWPDQGRNASATGDFDLYLPSSVLVTGYDIIFFWVARMIMMT 536

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------------------ 319
              +  +P  +          +G+K+SKS GNV+DP+++I+                   
Sbjct: 537 THFTGRVPFRQVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALQPLLDKRCTGLRRPE 596

Query: 320 -------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                               G DALR         G+   +D    +     +  N + N
Sbjct: 597 TIPLVRENTQQEFPAGIPAYGADALRLTFAALANLGRSINFDSKRCEG--YRNFCNKLWN 654

Query: 361 LVSRSVSMILKDYDGM----------------IPTPG---AFTESDESILSVCSRVLQEI 401
             SR V M  +  D                   P P    A++ +D  I+S+  +   E+
Sbjct: 655 -ASRFVLMHCEGQDCGLARHSQQHSAPAGQPGGPAPDGDLAYSLADRWIISLLQQTEAEV 713

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            +      +      +  LV     D Y +  K  +L               +  +  + 
Sbjct: 714 AKGFAEYRLDNVANAIYDLVWNEFCDWYLEIAKV-QLHSGGAAERRATRRTLIRTLEAML 772

Query: 460 ILLQAFVPKLANKIFDIL----FVADENRCFQSLDQRLKPGFMLHKTFDP 505
            L    +P +   ++  +     +  E+       Q         +  DP
Sbjct: 773 RLAHPIIPFITEALWQTVAPVAGLPGESVSIAHYPQA------RPEKIDP 816



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 28/177 (15%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I           H+GHA+   I D L R+HR+ G + L+  GTD  G       +   
Sbjct: 53  FSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGFNTLWLPGTDHAGIATQIVVERQL 112

Query: 66  ----------GVTTKV----FVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
                       T       FV +                R + D +D S + F  T + 
Sbjct: 113 QDLGLRRHDLAPTPAEARECFVAKVWEWKQRSGNTITTQMRRLGDSVDWSREYF--TMDD 170

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           +        +  + ++G IY+G     +  + ++  +D EV       +      P+
Sbjct: 171 KLSKVVTDTFVTLYEQGLIYRGKRLVNWDPQLQSAVSDLEVESEEKDGWLWHIAYPL 227


>gi|31874258|emb|CAD98022.1| hypothetical protein [Homo sapiens]
          Length = 1152

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 239 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 291

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 292 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 351

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 352 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 408

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 409 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 468

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 469 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 528

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 529 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 588

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 589 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 648

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 649 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 688


>gi|39939224|ref|NP_950990.1| leucyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722333|dbj|BAD04823.1| leucyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 821

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+++  H+GH      +D+++RF R+ G +VL   G D  G    + 
Sbjct: 32  SQKKFYCLDMFPYPSSEGLHVGHIEGYTASDIMSRFKRMQGFNVLHPFGWDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N  NF+     +   + +D  + T++   +   + ++KK+ +KG  
Sbjct: 92  ALQTGKPPRTFTYENINNFKKQIQSIGKSVDWDRELATSDPYFYSWTQWIFKKLYEKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         ++EV     G +    ++PV   + + +  +++ Y D+LL  
Sbjct: 152 VLKNTEVNFCPNLGTVLANEEVISNEKGMFSERGNHPVVKKKMKQWVLKITQYADRLLDD 211

Query: 180 YESHPEFILPIERRNEVI 197
                  +   E +   I
Sbjct: 212 LNLVNWPLNVKEMQANWI 229



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 116/355 (32%), Gaps = 58/355 (16%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS----AYQDKLLSYYESHPEFILPIE 191
           Y           Q Y A+  P+ + +     +  S      +   L   +       P+ 
Sbjct: 427 YTYKLRDWVFSRQRYWAEPFPIYYDDTNNKIYTDSDANLPIELPFLEQIKPSGTGESPLS 486

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           + +  + F K G K    S               YI       L NYL            
Sbjct: 487 KAHFWLYFEKDGKKYRRDSNTMPQLAGSSWYYIGYI-------LKNYLGIIPLNTTKAKE 539

Query: 252 KAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEK 302
              ++ P DL++ G +    H +Y   +         +S   P  K V     + H   K
Sbjct: 540 LLDYYLPVDLYIGGTEHAVGHLLYARFWHKFLYDLGLVSTKEPFQKLVNQGIILGHDHTK 599

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN +    ++   G D LR +++          + + G K         GI   +
Sbjct: 600 MSKSKGNGVSSSLMLARYGADVLRIYIMFMGPLEDIKSWCEKGFK---------GIQRFL 650

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           +R   M    +   +P     +     + ++  + + +  ++ +    ++ ++Q++  V+
Sbjct: 651 NRVYQM----FSFAMPNDFETS-----LNAIYHQTIFQTTQDYEKLKFNKVISQLMIFVN 701

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +V ++         +K    +A T              LL   VP L  +I   +
Sbjct: 702 QVYKH---------QKIGKKQAQT-----------FLQLLNPIVPHLTEEINQTI 736


>gi|322493703|emb|CBZ28993.1| putative valyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 967

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 83/477 (17%), Positives = 143/477 (29%), Gaps = 108/477 (22%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQH 154
            H+  +++   +     +        +  R E     +E+                    
Sbjct: 307 RHNLQQLVMMDLKGYVTMEPFKGMHRFDCRREIVKRLEEMGLLRGVEPYEYRVGRCERTG 366

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + V+ M    +F   S    + +    +    + P         +++  +K   +SR+  
Sbjct: 367 DIVEPMLMPQWFIDCSDMARRSVEAVRNGDLRLYPSSHEAVWYHWLE-NIKPWCVSRQ-L 424

Query: 215 DWGIKIP-----------DDPQ---------------------------------YIMYV 230
            WG +IP           +DP                                   ++  
Sbjct: 425 WWGHRIPAYKVVGSLPKDEDPWVVARNLEEAHAKAKKKFGLTDEQVAEASFEQDPDVLDT 484

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KK 289
           W  +     +T G+  + D  K +F+P  L   G DIL F         L     LP K+
Sbjct: 485 WFSSGLWPFSTLGWPTDSDDMK-RFFPNSLMETGHDILFFWVARMVMLSLHFTNKLPYKE 543

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIE------------------------------ 318
           VF H  +  K GEK+SKS GNV+DP+ VI                               
Sbjct: 544 VFLHAMVRDKNGEKMSKSKGNVVDPLYVIHGVSLQTLHDTVRSGNLSDKEVEKAIKQQKE 603

Query: 319 -------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
                  E G DALR+ L+     G+    D   +         N + N+V   +   L 
Sbjct: 604 FFPEGIPECGSDALRFGLLSYTQSGRSVNLDIQRVVA--YRQFCNKLWNVVRYVLYHALG 661

Query: 371 ------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLV- 421
                 K                  ILS     ++E+ + +         A   +     
Sbjct: 662 TDYMPSKQQFSPAEDAATLPLECRWILSRLDAAIEEVTQGLSEGLYDFALATGAIYRFWL 721

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  KP   K     +   V  V + V+ +   LL   +P L  +++  L
Sbjct: 722 YELCDVFLELTKPTIQKGGAKQQL--VQDVLLHVVEKALRLLHPMMPFLTEELWHRL 776



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D L RFHR+ G + L+  GTD  G       + 
Sbjct: 37  KPFVIVAPPPNVTGYLHLGHALTGAVQDTLIRFHRMKGDNTLYLPGTDHAGIATQVVVER 96

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                     F   ++    +    + +S D      T +++    
Sbjct: 97  RVMKEEGKSRHDLGRDEFMKRLWEFKKSHAGMITEQFRRIGLSLDWTRERFTMDEQSSAA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++ +   +++      +    ++  +D EV  
Sbjct: 157 VVEAFVRLHEDDLVHRDTRLVNWCCALQSAISDLEVEF 194


>gi|225573626|ref|ZP_03782381.1| hypothetical protein RUMHYD_01820 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038994|gb|EEG49240.1| hypothetical protein RUMHYD_01820 [Blautia hydrogenotrophica DSM
           10507]
          Length = 810

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      
Sbjct: 35  KKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKMLQGYYLIHPMGWDAFGLPAENY 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +   +N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 95  AIKMGVHPAISTAENVKNIKKQINDIAAIYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y ++LL+ 
Sbjct: 155 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGATVTKKNLRQWMLRITKYAERLLND 210

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 211 LDKLDWPEKVKKMQTDWI 228



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 95/258 (36%), Gaps = 41/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+            KA  + P D+++ G +    H +Y   +         +  +
Sbjct: 508 WYFLRYVDNHNSEALVSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAIDFD 567

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K           G K+SKS GNV+ P +++ + G D+LR + +       D  +D 
Sbjct: 568 EPFHKLFNQGMITGKNGIKMSKSKGNVVSPDDLVADYGCDSLRMYELFVGPPELDAEWDD 627

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+         +G+   + R  ++ +   +  +          + ++ + ++++ +I +
Sbjct: 628 RGI---------DGVYRFLKRFWTLAVDSIEKDVTAS-------KEMVKLRNKLVYDITQ 671

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +++  ++  ++  +      +           KK       TV          + +LL 
Sbjct: 672 RLESFSLNTVISGFMEY----NNKLTELA----KKEGGIDKETV--------ETMTVLLS 715

Query: 464 AFVPKLANKIFDILFVAD 481
            F P +A ++++ L   D
Sbjct: 716 PFAPHIAEELWEKLGHTD 733


>gi|309799376|ref|ZP_07693618.1| leucyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116991|gb|EFO54425.1| leucyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 419

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 6/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+L+RF R  G +VL   G D  G    + 
Sbjct: 30  SKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  
Sbjct: 90  AMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV      +       PV       +  +++AY ++LL+ 
Sbjct: 150 YEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLND 206

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 207 LDELDWPESIKDMQRNWI 224


>gi|238022875|ref|ZP_04603301.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
 gi|237865683|gb|EEP66821.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
          Length = 927

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/476 (15%), Positives = 146/476 (30%), Gaps = 34/476 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV---FVDQNSRNFRDMADVLDI--SY 91
           +      D+      D  G+ +    + AG T       + +       +     I  SY
Sbjct: 340 YFVCKQYDIQLINPIDGSGRFVGSVPRVAGKTVWEANPIILEWLEEKGRLLASSKIEHSY 399

Query: 92  DDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
               R      +    +                     ++ D  ++       G      
Sbjct: 400 AHCWRHKTPLIYRATPQWFIGMDKAGKKGNTLRNDALQAVDDTEFFP----AWGRARLQA 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
             +  P   +  + Y+    A+     +         L  +   ++     +   +L  +
Sbjct: 456 MIEQRPDWVVSRQRYWGTPMAFFAHKETGQLHPDSAELLEKVAQKIEEKGINAWFELDKA 515

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                      D     M VW D+ + + +           +   WPADL++ G D    
Sbjct: 516 DILPPEDCAQYDKLPDTMDVWFDSGSTHYSVLK------QREELAWPADLYLEGSDQHRG 569

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +            P  + +     +   G K+SKS+GNV+ P EV  E G D LR +
Sbjct: 570 WFQSSMLTGCAAFGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLW 629

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT---- 384
                    D    K+ LK+   +         +  +++ +  +     P   A      
Sbjct: 630 -AAATDYSGDLAISKEILKRVTES------YRRIRNTLAFLFANLSDFNPIEDAVPQADM 682

Query: 385 -ESDESILSVCSRVLQEIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KT 439
            E D   L +  ++ +++  E+      H A+ +++   SE     Y D  K      KT
Sbjct: 683 VEIDRYALVLARQLQEKLAGEHYPRYAFHFAVQELVQFCSEDLGAFYLDILKDRLYTTKT 742

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           N     +       + R L +L+   +   A + +DI+   +E+           P
Sbjct: 743 NSHARRSAQTALYHITRSLVLLMSPILCFTAEEAWDIIGGGEEDSVLYHTWHDFPP 798



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +++  RT + +       +
Sbjct: 106 VEKLHGKDMPASRFRELCREYASEQIARQKKDFIRLGVLGDWENPYRTMDYKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +++G     + L   +   + EV              P Q        F  
Sbjct: 166 IGEIYSAGYLFRGEKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVVYPFQDTAALAQAFGQ 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
                +  +   +   + LP 
Sbjct: 226 PEIAGEAFAVIWTTTPWTLPA 246


>gi|183602076|ref|ZP_02963444.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219682989|ref|YP_002469372.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241191309|ref|YP_002968703.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196715|ref|YP_002970270.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218569|gb|EDT89212.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620639|gb|ACL28796.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249701|gb|ACS46641.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251269|gb|ACS48208.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289177428|gb|ADC84674.1| Isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295794302|gb|ADG33837.1| isoleucyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 1107

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 103/300 (34%), Gaps = 22/300 (7%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            I+  +  + +L+        G         ++  W ++ +       Y           
Sbjct: 545 NINMHRPWIDNLTRPNPDDPTGKSTMHRITDVLDCWFESGSMPFAQYHYPFENKEYFEHH 604

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +P+D  V  IG+    F+ ++  A  L  + P  K V  HG +L   G+K+SK L N  D
Sbjct: 605 FPSDFIVEYIGQTRGWFYLLHVMATALF-DKPAFKNVICHGIVLGDDGQKMSKHLRNYPD 663

Query: 313 PIEVIEEVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +    +DG++  V   +     +    ++     
Sbjct: 664 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTEDGIRDTVRQIMLPVWSSYYFFTLYANAA 723

Query: 372 DYDGMIPTPGA-------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           ++                  + D  +L+   +++  + E+M N  I  A  +V   +   
Sbjct: 724 NHGDGYDARTLRADEVPGLPQMDRYLLARTRKLIANVTEHMDNFEISDACDEVADFIDML 783

Query: 424 VDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y      + W                   V+     +L    P  A  ++  L   D
Sbjct: 784 TNWYIRNTRDRFWN-------EDENAFNTLYTVLEAFMRVLAPLAPMEAEAVWRGLTGGD 836



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 68  PPFANGLPHYGHLLTGYAKDVVPRYQTMKGRRVNRVFGWDTHGLPAELEAQKELGIDSVD 127

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +V++        A  +D  ++   +T +  + ++    +K
Sbjct: 128 QIEQMGIDKFNDACRASVLKYVNEWRDYVHRQARWVD--FEHGYKTLDIPYMESVMWAFK 185

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            + +KG  YKG     Y  +D+   +  E+   AD
Sbjct: 186 TLYEKGLAYKGYRVLPYCPKDQTPLSAHELRMDAD 220


>gi|78777769|ref|YP_394084.1| leucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123768601|sp|Q30Q82|SYL_SULDN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78498309|gb|ABB44849.1| leucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 822

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 7/204 (3%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K YI +   +P+ + H+GH     I+D  AR++R +G +VL   G D  G     AA 
Sbjct: 36  RGKKYILSMFPFPSGRLHMGHVRNYTISDAFARYYRQEGFNVLHPIGFDSFGMPAENAAI 95

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K +   N    +     L  S+  D  + T+++ +    +     + +KG +Y+
Sbjct: 96  KNGSHPKKWTYDNIDYMKGEFKSLGFSFSKDRELATSDELYTKFEQGFIIDMYEKGLLYR 155

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G+         + V   +   Y+F+++ Y D+LL+   
Sbjct: 156 KKGFLNWCPSCHTVLANEQVIDGS----CWRCDSSVVKKDMNQYYFKITQYGDELLADLS 211

Query: 182 S-HPEFILPIERRNEVISFVKSGL 204
                +   +    E      +GL
Sbjct: 212 KLESGWPKQVLTMQENWIGKSNGL 235



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 92/258 (35%), Gaps = 35/258 (13%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP-ADLHVIGKDILRFHAIYWPAF------ 278
           ++   W              +     + K+W   D ++ G +    H +Y   F      
Sbjct: 506 FVESSWYFLRFCASPKNWLNEAFSKEQIKYWMGVDHYIGGIEHAILHLLYARFFTKVFRD 565

Query: 279 --LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L  + P  K + + G +L  G K+SKS GN +DP  +IE+ G D  R F++      
Sbjct: 566 LGYLEFDEPFNK-LLTQGMVLKDGAKMSKSKGNTVDPDAIIEKYGADTARLFILFAAPPT 624

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           ++  ++ + ++          I     RSV+ I K          + ++ ++        
Sbjct: 625 QELEWNDNAVEGAF-----KFIKRFYERSVNAI-KTNTIPKINHASLSKEEKFARKKVYE 678

Query: 397 VLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            L   RE   +    +  +A V+  ++ ++                    T   V  E  
Sbjct: 679 ALVRSREVYGEKYTFNTMIAGVMEAMNALN------------------LQTNSDVWSEAY 720

Query: 456 RQLAILLQAFVPKLANKI 473
             L  +++  +P + ++I
Sbjct: 721 WILTSIMEPVIPHVCSEI 738


>gi|331268720|ref|YP_004395212.1| leucyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125270|gb|AEB75215.1| leucyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 812

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 86/231 (37%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+A + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSAAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  +    +N  N  +    +    ++D  I T    ++   + ++ K+ +KG  Y+
Sbjct: 91  KTGVHPQDSTMKNIENMEEQLKSMGAMFNWDHEIVTCLPDYYKWTQWVFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V+      +F +++ Y D+LL   +
Sbjct: 151 KNAPVNWCPSCNTVLANEQVIDGH----CERCDSEVEKKALTQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                      +   I   K       +  S  TFD      D    + YV
Sbjct: 207 ELDWPEKTKSMQKHWIGKSKGAEVTFKVENSDITFDVFTTRVDTLNGVTYV 257



 Score =  111 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 109/339 (32%), Gaps = 35/339 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + ++ G      +     L Y             ++E            
Sbjct: 418 QRYWGAPIPVVYCDKCGTVTIPESQLPVELPYNIEFTPDGKSPLAKSEEFLHTTCPKCGG 477

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
             +R+T      +     Y+ YV                       K  P D +V G + 
Sbjct: 478 HATRETDTLDTFVCSSWYYLRYV--------DNNNSEKAFDIDKVNKMLPVDKYVGGPEH 529

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 530 ACMHLLYARFITKALRDMGYLNFDEPFKSLTHQGLILGPDGLKMSKSKGNTIAPDDYIKE 589

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  D +K            + V R +     + +    T
Sbjct: 590 FGADVFRMYLMFGFAYSEGGAWSDDAIKSMGR------FIDKVERLLDDARTELNNSKNT 643

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                +S++ +       +Q + E+      + A+A+++   + + +Y + +        
Sbjct: 644 KTTMEKSEKELNYARHYAIQHVTEDTDKFQFNTAIARIMEYTNSLSKYLNEE-------- 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                +  +    E +     LL  F P  + + +++L 
Sbjct: 696 -----NVNIEFLKEALCDYVKLLAPFTPHFSEEQWELLG 729


>gi|227530427|ref|ZP_03960476.1| leucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227349659|gb|EEJ39950.1| leucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 814

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 36  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGYNVLHPMGWDAFGLPAEQ 95

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F +QN  +FR+    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 96  YALKTGHNPKSFTNQNIDHFRNQIQSLGFSYDWDREVNTTDPEYYKWTQWIFEQLYKKGL 155

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV     + +  +++AY D+L
Sbjct: 156 AYESEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMKQWVLKITAYADRL 211

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 212 IDDLDLVDWPESVKEMQRNWIGRSE 236



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 105/263 (39%), Gaps = 45/263 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFL------- 279
            A +++        + +   A      +W P DL+V G +    H +Y   +        
Sbjct: 503 WAGSSWYWLRYTDPHNNKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLG 562

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +    P  K V     +    EK+SKS GNV++P +++E+ G D LR + +      + 
Sbjct: 563 LVPTKEPFMKLVNQGMILGANHEKMSKSKGNVVNPDDIVEKYGADTLRLYEMFMGPLTES 622

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D++GL         +G    + R   +++ + + +      F   D  +  V ++ +
Sbjct: 623 VPWDEEGL---------HGSYKWIQRVWRLLMDENNHLRDRVSTFN--DGKLTKVYNQTV 671

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E+ +    + A++Q++  V+E  +                       + VE +   
Sbjct: 672 KKVTEDYERMHFNTAISQLMVFVNEAFK--------------------ADDLPVEYMEGF 711

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++   +P +A +++    V+D
Sbjct: 712 VKMISPVIPHVAEELWSHFNVSD 734


>gi|114625600|ref|XP_520691.2| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 1152

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 239 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 291

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 292 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 351

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 352 YWGTPIPLWVSDDFEEVVCVGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 408

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 409 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 468

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 469 FGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 528

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 529 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 588

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 589 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 648

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 649 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 688


>gi|319411872|emb|CBQ73915.1| probable VAS1-valyl-tRNA synthetase [Sporisorium reilianum]
          Length = 1079

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 87/526 (16%), Positives = 156/526 (29%), Gaps = 88/526 (16%)

Query: 36  RFHRLDGLDV--LFTTG------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
           R+  L G +V   F  G       D     +        +T     +      R   + +
Sbjct: 368 RYKHLHGKNVVHPFVPGRKIPIVADAIIVDMEFGTGAVKITPAHDPNDYEVGKRHDLEFI 427

Query: 88  DISYDDFIRTTEKRHHDTC--------RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           +I  DD   T      +          R +  K+ + G   +   +           +  
Sbjct: 428 NILNDD--GTLNDNCGEFAGMKRFSARRAVIDKLKEIGSYVETKDNPMTVPICSRSGDVI 485

Query: 140 EVYKGADGQYYNA-------------QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
           E                             V  + E+ +F  +   QD  +S        
Sbjct: 486 EPIMKPQWWVNCKPLAAKVIERVRAGDMTIVPSVSEKEFFRWMENIQDWCISRQLWWGHR 545

Query: 187 I---------LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD-PQYIMYVWIDALT 236
                        +R  E        L +          G     +    ++  W  +  
Sbjct: 546 CPVYFVNIDGETQDRSEEKFWVTGRTLDEAQERASKLAAGKSFTLEQDDDVLDTWFSSGL 605

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHG 294
              +  G+ +  D  K  F+P+ L   G DIL F           L+  LP  K+VF H 
Sbjct: 606 WPFSIMGWPEKTDDLK-HFYPSSLLETGWDILFFWVARMCMLGVYLTGTLPF-KEVFCHA 663

Query: 295 FILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-------------- 339
            +    G K+SKSLGNVIDP++VIE +G+D L   L       K+               
Sbjct: 664 MVRDAHGRKMSKSLGNVIDPLDVIEGIGLDGLHTKLKEGNLDDKEIAKAAQGQKKDFPKG 723

Query: 340 ---------------------FYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGM 376
                                  + D L+        N + N    ++  +  +  +   
Sbjct: 724 IPQCGTDALRFALCAYTSAGRDINLDILRVEGYRKFCNKLWNATKFALLKLEPIASFQPA 783

Query: 377 IPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQK 432
                 G  +  ++ IL   +   + I E+++ +    A + V +       D Y +A K
Sbjct: 784 ATDEPSGDESLVEKWILHKLNAAAKAINEHLKERNFMAATSVVYNFWLYELCDVYIEAIK 843

Query: 433 PWE-LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           P       +    ++        +     LL  F+P +  +++  L
Sbjct: 844 PITDAGAADAKARASAQQTLYTCLDAGLKLLHPFMPFVTEELWQRL 889



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           HIGHA  + I D L R++R++G   LF  G D  G       +  
Sbjct: 149 TFIIPAPPPNVTGSLHIGHALTISIQDTLIRWYRMNGYRTLFNPGYDHAGIATQSVVEKR 208

Query: 66  GVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
               +                  + D       +    L  SYD      T +       
Sbjct: 209 LAKIEGKTRYDYGREKFLEKVFEWKDDYQSRIANQMRRLGASYDFSREAFTMDPVRSKAV 268

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
              + K+ + G IY+      +  +
Sbjct: 269 TEAFCKLHEDGIIYRANRLVNWCCK 293


>gi|226313405|ref|YP_002773299.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782371|sp|C0ZG86|SYI_BREBN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226096353|dbj|BAH44795.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 925

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 74/470 (15%), Positives = 147/470 (31%), Gaps = 50/470 (10%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI- 95
           F+     ++      D  G+   +A    G+  +      +   ++   +L +S+  F  
Sbjct: 334 FNVGQKYNLGVLCPVDHEGKMTNEAPGFEGLFYEDANKVITEKLKENGALLKLSF--FTH 391

Query: 96  ------RTTEKRHHDTCRILWKK---ISDKGDIYKGCYSGWYSLRDEAYYN--DDEVYKG 144
                 RT +   +      +        +               +    N   D     
Sbjct: 392 SYPHDWRTKKPVIYRATEQWFASIDGFRTQMLEAIKNVKWIPHWGETRLANMIADRGDWC 451

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
              Q       P+ + +            + +   +      +      NE++     GL
Sbjct: 452 ISRQRVWGVPIPIFYCKACNEPIINDTTINHVADLFRKEGSKVWFSREANELVP---EGL 508

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                    F            IM VW D+ +++             +   WPAD+++ G
Sbjct: 509 SCTKCDCNDFR-------KETDIMDVWFDSGSSHQAVLR-------ERGIAWPADMYLEG 554

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F++       +    P    +     +  +G K+SKSLGNVI P +VI+++G 
Sbjct: 555 SDQYRGWFNSSLSTGVAVYGTAPYKSVLSHGFALDGEGRKMSKSLGNVIVPQQVIDKMGA 614

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG- 381
           D LR ++        D       L      +    +   +  +   +L + DG  P    
Sbjct: 615 DILRLWVASVDYQA-DVRISDAIL------NQIAEVYRKIRNTFRFLLGNLDGFNPATDR 667

Query: 382 ----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWE 435
                  E D  +L+  ++V +  R+       H     V +   +     Y D  K   
Sbjct: 668 VAYEELGELDRYVLAKAAKVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDICKD-R 726

Query: 436 LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           L    PD  +      V  + +  L  L+   +P  A++++  +   +E 
Sbjct: 727 LYVEAPDSLKRRAAQTVMYDCLLSLVKLVAPLLPHTADEVWAFIPGVEEK 776



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 56/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   HIGHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KDRPSFVLHDGPPYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQA 104

Query: 62  AQNAG-------------VTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
             NA                 + +        RD    L +  D      T    +    
Sbjct: 105 IINAQGLDRRSIEVNDFRQRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ KG IYKG    ++S   E    D E+  
Sbjct: 165 IRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEIEY 201


>gi|291395794|ref|XP_002714327.1| PREDICTED: valyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 1268

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 112/376 (29%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R            
Sbjct: 709  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVTVNDPAVPPGEDPDGRYWVSGRSEAEAR 768

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 769  EKAAKEFGVTPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 826

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 827  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 886

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 887  QGLHEQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 946

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + KD+         G  +  D  ILS  +  ++    
Sbjct: 947  ILG--YRHFCNKLWNATKFALRGLGKDFVPSPTSQPGGHESLVDRWILSRLAEAVKLSNH 1004

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1005 GFQTYDFPAVTTSQYSFWLYELCDVYLECLKP-VLNGEDQAAAECARQTLYTCLDVGLRL 1063

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1064 LSPFMPFVTEELFQRL 1079



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 341 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMLGETTLWNPGCDHAGIATQVVVEKKL 400

Query: 67  V-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                                 + ++           L   + +D    T + +  +   
Sbjct: 401 WRERGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLCEAVT 460

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 461 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 494


>gi|256545394|ref|ZP_05472757.1| leucine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398955|gb|EEU12569.1| leucine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 802

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y      YP+ Q  H+GH       D++AR  RL G +V++  G D  G     
Sbjct: 29  KNKKKFYPLVEFPYPSGQGLHVGHPRPYTALDIVARKRRLQGENVIYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +   +    N  NF+     +  S+D    + TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNHIHPSIVTKNNIENFKAQMKSIGFSFDWSKEVNTTDPNYYKWTQWIFIQLYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G          + V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPVNWCPSCKVGLANEEVVDGK----CERCGSEVTHKVKNQWMLKITEYADRLID 204

Query: 179 YYESHPEFILPIERRNEVI 197
             +          ++   I
Sbjct: 205 DLDEVDYEEKIKTQQKNWI 223



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 123/359 (34%), Gaps = 65/359 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P +  N        E       G   LS   
Sbjct: 414 YKLRDWVFSRQRYWGEPIPMIYCEEHGWVPEKEENLPIKLPDVESYEVTDDGESPLSKID 473

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVI 263
           +  +    I   P       M  W  +   YL  T   +N D     S   + P D +  
Sbjct: 474 EFVNTTCPICGKPAKRETDTMPQWAGSSWYYLRYTDPNNNEDLSSKESLDYYTPVDWYNG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    +K+SKS GNV++P +
Sbjct: 534 GMEHTTLHLLYSRFWHKFLYDIGKVPTKEPYQKRTSHGMILGEDHQKMSKSRGNVVNPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYD 374
           ++ + G D LR + +          +  +G+K  R   +    + +LV        +D D
Sbjct: 594 IVRDYGADTLRCYEMFIGDFRSTAPWSDEGVKGCRKYLERVFNLYDLV--------EDGD 645

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                        + I  + ++ ++++ E+ ++   + A+A +++L++E           
Sbjct: 646 SYT----------KEIEILINQTIKKVSEDYESLKYNTAIASLMTLLNE----------- 684

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
                       +  +T +  +   ILL    P L  ++++ +    E     + + D+
Sbjct: 685 ---------MRNIGKITKKDFKTYLILLNPVAPHLTEELWEEIGFEGELNETSWPTYDE 734


>gi|15669137|ref|NP_247942.1| isoleucyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501012|sp|Q58357|SYI_METJA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1591614|gb|AAB98949.1| isoleucyl-tRNA synthetase (ileS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 1039

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 133/389 (34%), Gaps = 31/389 (7%)

Query: 102 HHDTCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
              T +   +    K +I +            +  Y N  +     +         P+  
Sbjct: 414 FRATEQWFLEISKIKDNIIEHAKTVQWIPHWVETRYINGVKFVGDWNISRQRYWGIPIPV 473

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW--G 217
              E               Y        L  +  N+      + L   ++ +       G
Sbjct: 474 WVCEKCG-----------KYIVVGSVEELEEKMINKDEVGEINDLHKPTVDKIKLRCECG 522

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            ++   P  ++ VW D+      + G  +           AD    G D +   F++ + 
Sbjct: 523 GEMKRVPD-VLDVWFDSGLAPYASIGVKELKK--------ADFITEGHDQVTKWFYSQHA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            + ++  ++P  K +     +   G+K+SKSLGNV++P +V+E+ G D LR++L+     
Sbjct: 574 LSAIVFNDIPYKKCLMHGFTLDEHGDKMSKSLGNVVNPDDVVEKYGADLLRFYLLSANKV 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVC 394
            +D  +    +   ++  L N + N    +V  M+L ++           + D  I+S  
Sbjct: 634 WEDLRFVWSEMDDVLS--LFNTLWNAYMFAVNYMVLDNFKPDEKYFEYLKDEDRWIVSRI 691

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           + V +   EN++    H     +   +       Y    +    K+ +            
Sbjct: 692 NSVAKIAIENLEVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWKEKDDADKLAAYQTLY 751

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
            V+ +LA +L    P  A  I+  L   D
Sbjct: 752 YVLLKLATILAPVAPHTAEAIYQNLKTED 780



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 20/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  ++ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I   
Sbjct: 34  ERNKEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVK 93

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +N                       K F  ++          L +   +++      K 
Sbjct: 94  VENEFGIKNKKEIETKIGVKQFIEKCKEFALKHKEIMEKQFKNLGVWLDWENAYMPITKE 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + +      K   +KG + +     ++  R E    + EV       Y  + +   +   
Sbjct: 154 YMEIGWWTLKVAHEKGLLTRDLRVVYWCPRCETALAEHEVRGEYKEVYDPSVYVKFRLAN 213

Query: 162 EEGYF 166
           EE  +
Sbjct: 214 EENTY 218


>gi|68171788|ref|ZP_00545131.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88658156|ref|YP_507592.1| leucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123736387|sp|Q2GG41|SYL_EHRCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67998789|gb|EAM85498.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599613|gb|ABD45082.1| leucyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 829

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 6/198 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     YP+   H+GH     I DV+AR+ R  G++V    G D  G     AA +  +
Sbjct: 28  YVLEMFPYPSGNIHMGHLRNYTIGDVIARYKRACGINVFHPIGWDAFGLPAENAALSYNI 87

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
               + + N  N R     + +SY  D  + T +  ++   +  +      G  Y+    
Sbjct: 88  NPHTWTESNIDNMRCQLKSIGLSYDWDKELATCDPSYYKHEQAFFLDFLKCGLAYRKESL 147

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPE 185
             +   D+    +++V  G            V+  +   +F +++ + ++LL+  +   +
Sbjct: 148 VNWDPVDQTVLANEQVIDG----RGWRSGAVVEKRKLFQWFLKITDFAEELLNDLQILDQ 203

Query: 186 FILPIERRNEVISFVKSG 203
           +   ++   E       G
Sbjct: 204 WPEKVKLMQEKWIGKSQG 221



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 117/404 (28%), Gaps = 80/404 (19%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            +          G   Q Y     P+ + ++ G                       LP +
Sbjct: 397 CKEITYYRMHDWGISRQRYWGCPIPIIYCKKCGTVPVDKK-----------DLPVTLPKD 445

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
                               K    G+    +       + +  + Y        N    
Sbjct: 446 VDFTKYGNPLDNHPTWKY-VKCPSCGMDAERETD-TFDTFFE-SSWYFAAFCGTSNGINK 502

Query: 252 KAKF--WPADLHVIGKDILRFHAIYWPAFLL----------------------------- 280
                  P + +V G +    H +Y   F                               
Sbjct: 503 DVCNMLLPVNYYVGGVEHAVLHLLYSRFFCRALTKCGYFNIKEPFSNLITQGMVCHSTYS 562

Query: 281 --SANLPLPKKVFSHGFI-----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
               N   P++            + + EK+SKS  NV++   +I++ G D  R F++ + 
Sbjct: 563 DEQGNYLFPEEAKKMMENGQHVTVGRAEKMSKSKKNVVNLEYIIDKYGADTARLFILSDT 622

Query: 334 ACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
              +D  +  DG++   R  + L   I +    +++   ++              D    
Sbjct: 623 PPERDIEWLDDGIEGASRYLSKLWRVIISYDKFNLNFNKEN----------IIGDDVKYR 672

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++L  I  ++    ++ A+A+   L + +                  R S   YV 
Sbjct: 673 RSVHKILSGITNDLDFCRLNCAVAKFRELSNIISEMI--------------RTSVNCYVV 718

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRL 493
            E I  L  +++ F+P +A K+++ +       N+ +   D  L
Sbjct: 719 SEAIYILIRVIEPFIPHIAEKLWENIGGKGMLWNQVWPKADSEL 762


>gi|269986994|gb|EEZ93270.1| aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 782

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 134/387 (34%), Gaps = 17/387 (4%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
               + K         +          DE Y    ++    +   Y  +  P Q  +   
Sbjct: 334 YVEKIEKIQHRTPLCERSKTPIEIIPLDEYYLKVTDIKDKLEELAYQLKIIPEQHKQILL 393

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK-----TFDWGIK 219
            + ++SA        Y      +       E     +                    G K
Sbjct: 394 NWLKVSADWPISRRRYYGTEIPLWYCNNCKEPYLPEEGEYYQPWKDNPPGNPTCKKCGGK 453

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPA 277
                +     W+D+  + L  T YL + +    K +P  L   G DI+R    Y     
Sbjct: 454 EFTGDERTFDTWMDSSVSALYVTKYLYDKNF-YEKTYPLSLRTQGIDIIRTWLNYSILRC 512

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           + L+  LP  K       +   GEK++KS GN IDP  VIE+ G DA R++   E   G 
Sbjct: 513 YQLTGKLPWEKAWIDGMGLDEHGEKMAKSKGNGIDPTIVIEKYGADAFRFWATSEALPGS 572

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           +  + +  L+    A     + N       +I +  +          ESD+ I++   ++
Sbjct: 573 NFLFSESRLQGS--AKFLTKLWN----VARLINQFGEPKEIAEKDLNESDKWIINYTEKL 626

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKT-NPDRASTVLYVTVEV 454
            +E  +  +         ++   +  V    Y +  K     +  + D  ++ +Y    V
Sbjct: 627 TEECIKGYEELNSFIPANRIREFIWNVFAPHYIELVKARAYGEGFSDDEKNSAIYTLNYV 686

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
           ++++ +L+    P + + ++ IL+  +
Sbjct: 687 LKRVLLLMAPITPFITHTLWSILYKGE 713



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+E         Y + +P H+G A +    D +AR  R+ G +VLF  G D +G  + +
Sbjct: 37  TEKEIFSTDAPPPYTSGRPWHLGAAAQYSKIDTIARSQRMLGKEVLFPVGMDRNGIPVER 96

Query: 61  AAQNA-----GVTTKVFVDQNS-----RNFRDMAD-----VLDISYDDFIRTTEKRHHDT 105
            A+         T +    +          ++M D          +D+  RT  K +   
Sbjct: 97  YAEKKYGIRMRDTPREKFLEICKTSLDELEKEMFDILNSFAYSADFDNVYRTDSKEYRTL 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +  + ++  KG I +G     Y +       D E+  
Sbjct: 157 TQSTFIEMWKKGQIIRGTRPSNYCIDCGTTIADAEIEY 194


>gi|260063616|ref|YP_003196696.1| valyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783061|gb|EAR14234.1| valyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 876

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 121/364 (33%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F R+       L       +  L   +           ++D ++SR+   W
Sbjct: 350 IEPRLSDQWFLRMEELAQPALKAVLETRDVRLVPSKFENTYRHWMENIRDWNISRQ-LWW 408

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         + ++  W  +    
Sbjct: 409 GQRIPAWYYGPGQADFVVAATPAEALEQAREQSGNPSLQPDDLRQDEDVLDTWFSSWIWP 468

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++  G +  P+  + + ++P    V G DIL F    +    +      P      +   
Sbjct: 469 ISVFGGILEPENEEVSYYYPTTDLVTGPDILFFWVARMIIAGYEFRGERPFETVYLTGLV 528

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  D +E+I E G D +R  L+   A G D  +D+   ++  N   A
Sbjct: 529 RDKQRRKMSKSLGNSPDALELISEFGADGVRVGLLLSAAAGNDLLFDESLCQQGKN--FA 586

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N         +   D   P   A   S     +  S VL EI ++     I  AL 
Sbjct: 587 NKIWNAFRLVRGWEVA--DREQPESAALGVS--WYRARFSAVLAEIEDHFSKYRISDALM 642

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               L+ E       +  KP        DR        + +      LL  F+P L+ ++
Sbjct: 643 ATYKLLWEDFCSWLLEIVKP--AYGEPIDRK--TYAEVIGLFEDNLRLLHPFMPFLSEEV 698

Query: 474 FDIL 477
           +  +
Sbjct: 699 WQHI 702



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 49/179 (27%), Gaps = 18/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ERE   +           H+GH     I DVL R  R+ G +  +  GTD          
Sbjct: 32  EREPYTVVIPPPNVTGVLHMGHMLNNTIQDVLVRRARMMGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        +         +    L  S D      T +     
Sbjct: 92  VAKLRDEGISKDSISREEFLKHAWDWTHNYGGVILEQLKKLGCSCDWERTKFTMDPDMEA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +   ++  +  KG IY+G     +        +D+EV       +      PV   E  
Sbjct: 152 SVLQVFVDLYKKGLIYRGYRMVNWDPEARTTLSDEEVNYEERQGFLYHIAYPVVGSESR 210


>gi|324992208|gb|EGC24130.1| leucine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|327472938|gb|EGF18365.1| leucine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 858

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++   Y      YP+    H+GH       D+L+R+ R    +VL   G D  G    +
Sbjct: 54  KDKSNFYALDMFPYPSGAGLHVGHPEGYTATDILSRYKRAQCYNVLHPMGWDAFGLPAEQ 113

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N  NF+   + L  SY  D  I TT+  ++   + ++ K+ +KG 
Sbjct: 114 YAMDTGNDPADFTAENIANFKRQINALGFSYDWDREINTTDPNYYKWTQWIFTKLYEKGL 173

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV      +       PV       +  +++AY ++LL+
Sbjct: 174 AYEAEVPVNWVEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLN 230

Query: 179 YYESHPEFILPIERRNEVI 197
             E         + +   I
Sbjct: 231 DLEELDWPESIKDMQRNWI 249



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 103/313 (32%), Gaps = 82/313 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +N   +  +    + P D+++ G +    H +Y   + 
Sbjct: 512 ETNTMPQWAGSSWYYLRYIDPHNNEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWH 571

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   +    P  K      +    +  H+G                          
Sbjct: 572 KFLYDIGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFNIETGEELEQ 631

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 632 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 683

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   ++         +    TE+  ++  V    ++ + E ++    + A+A ++
Sbjct: 684 -KFLDRVYRLLN--------SKELVTENSGALDKVYHETVKSVTEQIEELKFNTAIAHLM 734

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++               ++        VE  +    LL  F P LA +++  + 
Sbjct: 735 IFVNVANK--------------EEKLY------VEYAKGFIQLLAPFAPHLAEELWQAVA 774

Query: 479 VADENRCFQSLDQ 491
              E+  + +   
Sbjct: 775 QTGESISYVTWPT 787


>gi|193794426|gb|ACF21425.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794436|gb|ACF21430.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794442|gb|ACF21433.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAVEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|169351198|ref|ZP_02868136.1| hypothetical protein CLOSPI_01977 [Clostridium spiroforme DSM 1552]
 gi|169292260|gb|EDS74393.1| hypothetical protein CLOSPI_01977 [Clostridium spiroforme DSM 1552]
          Length = 929

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 142/448 (31%), Gaps = 28/448 (6%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA------DVLDISYDDFIRTTEKRH 102
              DEHG  +    +          ++      D        + +  SY    RT +   
Sbjct: 365 CNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKLEFITHSYPHDWRTKKPII 424

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                  +  +    D          +  +E  +          G +  ++         
Sbjct: 425 FRATDQWFCSLDKIRDKLLAEID-SVNWLNEWGHIRIYNMIKERGDWCISRQR---SWGV 480

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                        +      H   +      N      +  L     + +    GI    
Sbjct: 481 PIPIIYCEDGTPIMEEKVFKHISDLFRKHGSNVWFELDEKDLLPEGYTNEHSPNGI--FK 538

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
             + IM VW D+ +++             +   +P DL+  G D     F++        
Sbjct: 539 KEKDIMDVWFDSGSSHTGCMK-------ERGYPYPVDLYFEGSDQYRGWFNSSLIIGTAA 591

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P    +     +  KG K+SKSLGN +DPI+++ + G D +R +    +A  +D  
Sbjct: 592 HGKAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVNQYGADIVRLW-ATSVAYQQDVR 650

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
              + +K+   ++    I N +   +  +       +      T+ D+ +L   + ++  
Sbjct: 651 ISDEIMKQI--SENYRKIRNTMRFVLGNLNDFKQSDLVAVNDLTDVDKYMLVELNNLIDG 708

Query: 401 IRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQ 457
             +   N     A  Q+++  + V    Y D  K    ++K +  R   V  V     + 
Sbjct: 709 YHQAYDNYDFADANQQILNYFTNVLSSFYMDFTKDILYIEKADSLRRRQVQTVLYYHAKA 768

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           +  L+   +   A ++ D  F  DEN+ 
Sbjct: 769 MMKLISPVLVFTAEELHDH-FHCDENKA 795



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++         Y N   H+GH    +I DV+ R++ ++G    F  G D HG  I  A
Sbjct: 65  EGKDSFVFHDGPPYANGNMHMGHMLNKVIKDVICRYNNMEGRYTPFIPGWDTHGLPIENA 124

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
            Q  GV  K             +  +      +    +    D      T          
Sbjct: 125 IQKLGVNRKEMSTAAFREKCDAYAHEQVNKQMEQLIRMGTFADYKHPYLTLLPEFEANQI 184

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K++  G I+KG    ++S   E+   + E+   
Sbjct: 185 DVFAKMAMDGLIFKGLKPVYWSPSSESALAEAEIEYH 221


>gi|166032551|ref|ZP_02235380.1| hypothetical protein DORFOR_02266 [Dorea formicigenerans ATCC
           27755]
 gi|166026908|gb|EDR45665.1| hypothetical protein DORFOR_02266 [Dorea formicigenerans ATCC
           27755]
          Length = 848

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++EK Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G     
Sbjct: 72  KKKEKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIIHPMGWDAFGLPAEN 131

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV  ++    N +N +   +       +D  + TT+   +   + ++ K+  +G 
Sbjct: 132 YAIKMGVHPEISTAANIKNIKRQINEIAALYDWDREVNTTDPNFYKWTQWIFVKMFKEGL 191

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+  +   +    +    ++EV     G         V       +  R++ Y D+LL+
Sbjct: 192 AYEKEFPINWCPSCKTGLANEEVV----GGKCERCGAEVTKKNLRQWMLRITKYADRLLN 247

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + + + I
Sbjct: 248 DLDKLDWPEKVKKMQADWI 266



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 101/260 (38%), Gaps = 46/260 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFL------- 279
            A +++       ++ D          +  P D+++ G +    H +Y   +        
Sbjct: 541 WAGSSWYFLRYVDNHNDKELVSREKADEMLPVDMYIGGVEHAVLHLLYSRFYTKFLNDIG 600

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +  + P  K           G K+SKS GNV+ P +++ + G D+LR + +       D
Sbjct: 601 VIDFDEPFHKLFNQGMITGKNGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELD 660

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D  G+         +G+   + R  ++++   D  +          + ++    +++
Sbjct: 661 AEWDDRGI---------DGVNRFLKRLWNLVMDSKDSDVKAS-------KEMIKERHKLV 704

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            ++   +++  ++  ++  +      ++  +  K    K+   D+         E +  +
Sbjct: 705 YDVTTRLESFSLNTVISAFME---HNNKLIEIAK----KEGGIDK---------ETLSTV 748

Query: 459 AILLQAFVPKLANKIFDILF 478
           A+LL  F P +A ++++ L 
Sbjct: 749 AVLLSPFAPHVAEELWEQLG 768


>gi|289582941|ref|YP_003481407.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289532494|gb|ADD06845.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 971

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 75/234 (32%), Gaps = 38/234 (16%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           Y+     Y +   H+GH     I D  AR+ RL G DVL   G D  G     AA     
Sbjct: 35  YVLGMFPYTSGTLHMGHVRNYAITDAYARYRRLRGDDVLHPMGWDAFGLPAENAAYERAS 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             + +     R  R+  + L   YD    I T E  ++   + L+K+  + G +     +
Sbjct: 95  DPESWTRACIRRMREELETLGFGYDWSREITTCEPSYYRWNQWLFKRFHEAGLVEFTGAT 154

Query: 126 GWYSLRDEAYYNDDEVYKGADGQ------------------------------------Y 149
             +    E    D +V     GQ                                     
Sbjct: 155 VNWCPDCETVLADAQVAVDEGGQAVTATADEAGDNGDSAGGAHDESNGNAHVHEHSTARV 214

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                 PV+  E + +FF ++ Y D+L+   +   ++   +          + G
Sbjct: 215 CWRCGTPVEQRELDQWFFTITDYADELVDGLDDLDQWPEGVREIQRNWIGRQEG 268



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 106/340 (31%), Gaps = 51/340 (15%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV   E+ G+           L  +       L      +  S    G    
Sbjct: 478 QRYWGTPIPVVHCEDCGHVLVPDEELPVELPEFVQTTGNPLDAAEEWKETSCPDCGGPAE 537

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
             +            D              +L+        D   A  W P D++V G +
Sbjct: 538 RET------------DTMDTFVDSSWYFLRFLSPDLADAPFDTELANEWLPVDVYVGGDE 585

Query: 267 ILRFHAIYWPAFL-------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
               H +Y                    +++ S G +L++GEK+S S GNV+ P E    
Sbjct: 586 HAILHLLYIRFVTRALADLGFLDQREPVERLVSQGTVLYEGEKMSSSSGNVVTPDE---- 641

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G +  R F++      +D  +  + +  R   DL   + ++ +  V       + +   
Sbjct: 642 YGAETTRLFVLSAAHPEQDFEWTANDV--RGAYDLQQALYSMATEFVDEGETRVERVSHD 699

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY--FDAQKPWELK 437
                E D +I++         R   +    HR + +V  L   + +Y  +D        
Sbjct: 700 EFVDREIDRTIVAA--------RTEFERFRFHRVVTEVQELAGLLRQYRGYDRIH----- 746

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       V    +  +A L+    P L  ++++ L
Sbjct: 747 ----------GEVYRRGLLTIAALISPLAPHLGEELWNKL 776


>gi|224097273|ref|XP_002310896.1| predicted protein [Populus trichocarpa]
 gi|222853799|gb|EEE91346.1| predicted protein [Populus trichocarpa]
          Length = 1054

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 76/417 (18%), Positives = 139/417 (33%), Gaps = 58/417 (13%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           D+ +      + +  ++      +    DG+    +  P Q++ E   +           
Sbjct: 449 DVVEPMIKPQWFVNCQSM-AKQALEVAMDGEIPRLEFIPKQYLAEWKRWLENIRDWCISR 507

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-----------WGIKIPDDPQY 226
             +  H      +   ++ +  + S      ++R   D              ++  DP  
Sbjct: 508 QLWWGHRIPAWYVTLDDDEMKEIGSYHDHWVVARNEEDALAEASQKFSGKKFQMIQDPD- 566

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +    L+  G+ D+ D  +A F+P  +   G DIL F    +      L  ++
Sbjct: 567 VLDTWFSSGLFPLSVLGWPDDTDDLRA-FYPTSVLETGHDILFFWVARMVMLGIKLGGDV 625

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF---- 340
           P  K           G K+SKSLGNV+DP+EVI  V ++ L   L       K+      
Sbjct: 626 PFRKVYLHPMIRDAHGRKMSKSLGNVVDPLEVINGVSLEGLHKRLEEGNLDPKELDVAKA 685

Query: 341 -------------------------------YDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                                           + D L+        N + N V  ++S +
Sbjct: 686 GQKQDFPNGIAECGADALRFALVCYTAQSDKINLDILRVVGYRQWCNKLWNAVRFAMSKL 745

Query: 370 LKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDR 426
             DY   +  P  A   S + ILSV ++ + +    M +     A + V S       D 
Sbjct: 746 DTDYTPPLTLPLEAMPSSCKWILSVLNKAIFKTVSAMNSYEFSDAASTVYSWWQYQFCDV 805

Query: 427 YFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           + +A KP       P      S+        +     LL   +P +  +++  L  A
Sbjct: 806 FIEAIKP-YFSGDGPSFAAERSSAQDTLWVCLDNGLRLLHPLMPFVTEELWQRLPPA 861



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA    I D + RF R+ G + L+  G D  G      
Sbjct: 114 SSKPPFAIVLPPPNVTGALHIGHALTAAIEDTIIRFKRMSGFNALWVPGVDHAGIATQVV 173

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +                     + D+           L  S D      T + + 
Sbjct: 174 VEKKLMRDHHLTRHDLGREKFVSEVWKWKDEYGGTILKQLRRLGASLDWSRECFTMDDKR 233

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +D EV  
Sbjct: 234 SRAVTEEFNRLYKEGLIYRDIRLINWDCTLRTAISDVEVDY 274


>gi|33593207|ref|NP_880851.1| valyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81424893|sp|Q7VWK6|SYV_BORPE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33563582|emb|CAE42481.1| valyl-tRNA synthetase [Bordetella pertussis Tohama I]
          Length = 960

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 116/346 (33%), Gaps = 53/346 (15%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           QD  +S        I      +  +   +S  +    +R     G  +  DP  I+  W 
Sbjct: 441 QDWCISRQLWWGHQIPAWYSEDGQVFVARSEEEAQEQARAAGVSG-PLTRDPD-ILDTWF 498

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     TT G+ ++    + ++ P+ + V G DI+ F    +      ++ ++P     
Sbjct: 499 SSALVPFTTFGWPEDTPDLR-RYLPSSVLVTGFDIIFFWVARMVMLTMHMTGSVPFKHVY 557

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEE------------------------------- 319
                    G+K+SKS GN +DP+++I+                                
Sbjct: 558 VHGLIRDADGQKMSKSKGNTLDPVDLIDGIDLKGLVRKRTFGLMHPKQAGAIEKATRRQY 617

Query: 320 ------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+ +      G++  +D    +   N        N +  +   +L + 
Sbjct: 618 PDGIPAFGTDALRFTMAAYATLGRNINFDLKRCEGYRN------FCNKLWNATRFVLMNT 671

Query: 374 DGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           +G       G  + +D  I+S    +  E+     +         +   V +   D Y +
Sbjct: 672 EGHALDGDGGELSFADRWIVSQLQALEAEVERGFADYRFDNVANALYRYVWDEYCDWYLE 731

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             K    + T   +  T     + V+  +  L    +P +  +++ 
Sbjct: 732 LAKVQIQQGTPAQQLGT-RRTLIRVLEAVLRLAHPVIPFITEELWQ 776



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 72/248 (29%), Gaps = 23/248 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + +   I           H+GHA+   I D L R+HR+ G D +F  GTD  G      
Sbjct: 49  TDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGDDTVFVPGTDHAGIATQIV 108

Query: 62  AQNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +      K                 + +Q+          L  S D      T + R  
Sbjct: 109 VERQLDAQKVSRHDLGREKFVEKVWEWKEQSGSTITGQVRRLGASADWPREYFTMDARMS 168

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLR-----DEAYYNDDEVYKGADGQYYNAQHNPVQ 158
                 + ++  +G IY+G     +  +      +     +EV        Y     P  
Sbjct: 169 RGVAETFVRLYQQGLIYRGKRLVNWDPKLLTAVSDLEVQSEEVDGHMWHILYPFVDGPQT 228

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             +++G    L               +  L +   +     +   L +L L  +      
Sbjct: 229 ITDQDGNTVTLRGMTIATTRPETMLADGALCVHPDDPRYKHLLGKLVELPLCDRNIPIIA 288

Query: 219 KIPDDPQY 226
               DP +
Sbjct: 289 DDFVDPDF 296


>gi|157105567|ref|XP_001648925.1| valyl-trna synthetase [Aedes aegypti]
 gi|108880047|gb|EAT44272.1| valyl-trna synthetase [Aedes aegypti]
          Length = 1048

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 103/301 (34%), Gaps = 47/301 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + +   W  +     +  G+ DN    K  ++P  L   G DIL F    + +    L 
Sbjct: 570 DEDVRDTWFSSGLFPFSVVGWPDNTVDVK-LYYPTSLLETGHDILFFWVAGMVFFGQTLL 628

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------ 317
             LP  +           G K+SKSLGNVIDP++VI                        
Sbjct: 629 GKLPFKEVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLDGLHLQLLDSNLDPKEIEK 688

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DA+R+ L      G+D   + D ++ +      N + N    
Sbjct: 689 AKAGQKQDYPNGIPECGTDAMRFALCAYNTQGRDI--NLDIMRVQGYRFFCNKLWNATKF 746

Query: 365 SVSMIL--KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
           ++      + YD +    GA +  D  ILS  +  +    +  +     +  +       
Sbjct: 747 ALMYFTGEERYDVLQELTGAESNIDRWILSRLANCIDVSNKGFEKYEFAQTTSACYEFWL 806

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               D Y +  KP   +  + +  ++        +     LL  F+P +  +++  L  A
Sbjct: 807 YDLCDVYLECLKP-VFQSGSEEAKASARKTLYTCLNLGLKLLSPFMPFITEELYQRLPRA 865

Query: 481 D 481
           D
Sbjct: 866 D 866



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 21/139 (15%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK- 70
                    H+GHA    I D + R++R+ G   L+  G D  G       +      + 
Sbjct: 131 PPPNVTGSLHLGHALTNAIEDCITRWNRMKGRTTLWVPGCDHAGIATQVVVEKKLWREQK 190

Query: 71  ----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWK 111
                            + ++           L  SYD + R   T + +        + 
Sbjct: 191 QTRHDLGREKFIEKIWQWRNEKGDRIYHQLKRLGSSYD-WSRACFTMDPKLCKAVTEAFV 249

Query: 112 KISDKGDIYKGCYSGWYSL 130
           ++ ++G IY+    G +S 
Sbjct: 250 RLHERGMIYRSNRLGNWSC 268


>gi|91784464|ref|YP_559670.1| valyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|91688418|gb|ABE31618.1| valyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 959

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 119/366 (32%), Gaps = 59/366 (16%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
              Y+  L   QD  +S        I      N  I   K+     + +      G  + 
Sbjct: 409 TTTYYQWLENIQDWCISRQLWWGHQIPAWYGENGEIFVAKTEEDARAKATAAGYTG-ALK 467

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
            D   ++  W  +     ++ G+ +     K  F P+ + V G DI+ F    +      
Sbjct: 468 RDED-VLDTWFSSALVPFSSLGWPNETLELK-HFLPSSVLVTGFDIIFFWVARMVMMTTH 525

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----------------------- 316
            +  +P             +G+K+SKS GN +DPI++                       
Sbjct: 526 FTGKVPFDTVYVHGLVRDAEGQKMSKSKGNTLDPIDIVDGIDLDALVAKRTTGLMNPKQA 585

Query: 317 --------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                         I   G DALR+ +      G++  +D    +     +  N + N  
Sbjct: 586 ASIEKKTRKEFPDGIPAFGTDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-A 642

Query: 363 SRSVSMILKDYDGMIPTPGA-----------FTESDESILSVCSRVLQEIRENMQNQLIH 411
           +R V M  + +D     P             F+++D  I+S   RV  EI     +    
Sbjct: 643 TRFVLMNCEGHDCGFGKPEQCGECGPDGHLHFSQADFWIVSRLQRVEAEIARGFADYRFD 702

Query: 412 RALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
                +   V +   D Y +  K  +++   P++        + V+  +  L    +P +
Sbjct: 703 NVANALYKFVWDEYCDWYLELAKV-QIQTGQPNQQRATRRTLLRVLETVLRLAHPVIPFI 761

Query: 470 ANKIFD 475
              ++ 
Sbjct: 762 TEALWQ 767



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   I           H+GHA+   I D L R+HR+ G + L+  GTD  G      
Sbjct: 41  ENRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMLGENTLWVPGTDHAGIATQIV 100

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
            +                        +  Q+     +    L   I +     T + +  
Sbjct: 101 VERQLDAQGVSRHDLGREKFVERVWEWKQQSGSTITNQVRRLGASIDWSREYFTMDDKMS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 161 AAVRDVFVRLYEQGLIYRGKRLVNWDPALLTAVSDLEVVSEEENGSLWHIQYPL 214


>gi|108705809|gb|ABF93604.1| Valyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 933

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 131/385 (34%), Gaps = 47/385 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +  +  +Y    N   W      ++        ++   +         +R     +  
Sbjct: 418 IPQQYEQDWYRWLANIRDWCVSRQLWWGHRVPAWYVVLEDDQENILGSDNDRWVVARNES 477

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           ++ L      +K      ++  DP  ++  W  +    LT  G+ D+    KA F+P  +
Sbjct: 478 EANL---EAHQKYPGKKFELHQDPD-VLDTWFSSGLFPLTVLGWPDDTADVKA-FYPGSV 532

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DIL F    +      L  ++P  K           G K+SKSLGNVIDP++VI 
Sbjct: 533 LETGHDILFFWVARMVMMGMQLGGDVPFQKVYLHPMIRDAHGCKMSKSLGNVIDPVDVIN 592

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKK--------------------------RVNA 352
            + ++ L   L        +     DG KK                          ++N 
Sbjct: 593 GIPLEGLLKRLEEGNLDPNELNIASDGKKKDFPDGIAECGTDALRFALVSYTSQSDKINL 652

Query: 353 DL-----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIR 402
           D+          N +  ++   +         P   +        + ILSV ++ + +  
Sbjct: 653 DIKRVVGYRQWCNKLWNAIRFAMGKLGDHYTPPATISVTIMPPICKWILSVLNKAIGKSV 712

Query: 403 ENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEV-IRQL 458
            +++      A + + S       D + +A KP+    +   + A       + V +   
Sbjct: 713 TSLEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQELESARAASRDALWVCLDTG 772

Query: 459 AILLQAFVPKLANKIFDILFVADEN 483
             LL  F+P +  +++  L    ++
Sbjct: 773 LRLLHPFMPCVTEELWQRLPQPKDS 797



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           + Y+           HIGHA  + I D + R+ R+ G + L+  G D  G       +  
Sbjct: 100 RYYVL-PPPNVTGALHIGHALTVAIEDAIIRWRRMSGYNALWVPGVDHAGIATQVVVEKK 158

Query: 66  GVTTKVFVDQ 75
            +  K     
Sbjct: 159 LMREKKLTRH 168


>gi|193794320|gb|ACF21372.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794424|gb|ACF21424.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794430|gb|ACF21427.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEDIDRTLLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|146094104|ref|XP_001467163.1| valyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071527|emb|CAM70216.1| putative valyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 967

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 86/477 (18%), Positives = 139/477 (29%), Gaps = 108/477 (22%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQH 154
            H+  +++   +     +        +  R E     +E+                    
Sbjct: 307 RHNLQQLVMMNLKGYVTMEPFKGMHRFDCRREIVKKLEEMGLLRGVEPYEYRVGRCERTG 366

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + V+ M    +F   S    + +    +    + P         +++  +K   +SR+  
Sbjct: 367 DIVEPMLMPQWFIDCSDMARRSVEAVRNGDLRLYPPSHEAVWYHWLE-NIKPWCVSRQ-L 424

Query: 215 DWGIKIP-----------DDPQ---------------------------------YIMYV 230
            WG +IP            DP                                   ++  
Sbjct: 425 WWGHRIPAYKVVGSLPKDVDPWVVARNLQEAHAKAKKKFGLTDEQVAEASFEQDPDVLDT 484

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KK 289
           W  +      T G+  + D  K +F+P  L   G DIL F         L     LP K+
Sbjct: 485 WFSSGLWPFATLGWPTDSDDMK-RFFPNSLMETGHDILFFWVARMVMLSLHFTNKLPYKE 543

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIE------------------------------ 318
           VF H  +  K GEK+SKS GNVIDP+ VI                               
Sbjct: 544 VFLHAMVRDKNGEKMSKSKGNVIDPLYVIHGVSLQTLHNTVRSGNLGDKEVEKAIKQQKE 603

Query: 319 -------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
                  E G DALR+ L+     G+    D   +         N + N+V   +   L 
Sbjct: 604 FFPEGIPECGSDALRFGLLSYTQSGRSVNLDIQRVVA--YRQFCNKLWNVVRYVLYHALG 661

Query: 371 ------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLV- 421
                 K                  ILS     + E  + M         A   V     
Sbjct: 662 TDYVPSKQQFSPAEDAAMLPLECRWILSRLDAAIAEATQGMSEGLYDFALATGAVYRFWL 721

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  KP   K     +   V  V + V+ +   LL   +P L  +++  L
Sbjct: 722 HELCDVFLELTKPTIQKGGEKQQL--VQDVLLHVVEKALRLLHPMMPFLTEELWHRL 776



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D L RFHR+ G + L+  GTD  G       + 
Sbjct: 37  KPFVIIAPPPNVTGYLHLGHALTGAVQDTLIRFHRMKGDNTLYLPGTDHAGIATQVVVER 96

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                     F   ++    +    + +S D      T +++    
Sbjct: 97  RVMKEEGKSRHDLGRDEFMKRLWEFKKNHAGMITEQFRRIGLSLDWTRERFTMDEQSSAA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++ + G +++      +    ++  +D EV  
Sbjct: 157 VVEAFVRLHEDGLVHRDTRLVNWCCALQSAISDLEVEF 194


>gi|330995666|ref|ZP_08319564.1| isoleucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574725|gb|EGG56286.1| isoleucine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 1140

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 101/269 (37%), Gaps = 12/269 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF--WPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y             +PAD    G D     F  ++
Sbjct: 601 KPMKREADLIDVWFDSGAMPYAQIHYPFEHKAELDGRTVYPADFIAEGVDQTRGWFFTLH 660

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + ++  ++     + +   +   G K+SK LGN +DP   IE+ G DA+R++++   +
Sbjct: 661 AISTMVFDSVAYKAVISNGLVLDKNGNKMSKRLGNAVDPFGAIEQYGSDAVRWYMITNSS 720

Query: 335 CGKDGFYDKDGLKKRVNADL--ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
              +  +D+ G+++             + ++   ++    Y       G   E D  ILS
Sbjct: 721 PWDNLKFDEAGVQEVSRTFFGKLFQTYSFLTMYANVDGWHYAEADVPMGERPEIDRWILS 780

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWELKKTNPDRASTVL 448
             + +++ +    ++    +A   +   V  +  + +     ++ W       D+ S   
Sbjct: 781 ELNTLVKNVDACYEDYEPTKAGRLIQDFVIDNVSNWFVRLSRKRFWGSAMG-TDKLSA-Y 838

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +  +A L+    P  A++++  L
Sbjct: 839 QTLYTCLETVAKLMAPIAPYYADRLYHDL 867



 Score = 53.6 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 32/128 (25%), Gaps = 15/128 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D   RF  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFIFFEGPPSANGHPGIHHVLARSIKDTFCRFKTMKGFLVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +    +     TK  + +             IS +++ R                    G
Sbjct: 94  VELGVEKELGITKEDIGKT------------ISIEEYNRKCRTNVMKYTEEWTDLSHKMG 141

Query: 118 DIYKGCYS 125
                 + 
Sbjct: 142 YWVDMEHP 149


>gi|110799770|ref|YP_695110.1| leucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209961|ref|ZP_02635586.1| leucyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|122959040|sp|Q0TTD0|SYL_CLOP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110674417|gb|ABG83404.1| leucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170711965|gb|EDT24147.1| leucyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 816

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDDLDWPEKTVSMQKHWI 222



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 111/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTEAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + + +L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWSLLGNSYSIFNEAWPKFD 747


>gi|217031694|ref|ZP_03437198.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
 gi|216946541|gb|EEC25141.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
          Length = 306

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI + + YP+ + H+GH     I D LAR++RL   +VL   G D  G     AA  
Sbjct: 29  PKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIK 88

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N    +   + L  S+  +    T++  +    +  +  + +KG IY+ 
Sbjct: 89  HGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRK 148

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V  G            V   E   Y+ +++ Y ++LL   E+
Sbjct: 149 KAMLNWCPNDKTVLANEQVIDG----RCWRCDTEVIQKELYQYYLKITNYAEELLKDLET 204

Query: 183 -HPEFILPIERRNEVISFVKSGLK 205
               +   +    +      SGL+
Sbjct: 205 LENHWPSQVLIMQKNWIGKSSGLQ 228


>gi|302039506|ref|YP_003799828.1| leucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607570|emb|CBK43903.1| Leucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 811

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    +
Sbjct: 30  QSKPKFYCLDMFPYPSGSGLHVGHLEGYTATDIVSRYKRMRGFNVLHPMGWDAFGLPAEQ 89

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV   +   QN   F+     + +SYD    + TT++ ++   + ++ K+ ++G 
Sbjct: 90  YAVKTGVHPAITTAQNIATFKRQMKRVGLSYDWERELSTTDQDYYRWTQWIFLKLFERGL 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +         ++E+  G            V       +  +++AY ++LL 
Sbjct: 150 AYVAEVPVNWCPALGTVLANEEIVDGKSEVGGFD----VIRKPMRQWVLKITAYAERLLE 205

Query: 179 YYESHPEFILPIERRNEVI 197
                      +E +   I
Sbjct: 206 DLTLVEWPTSTLEMQKNWI 224



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 103/267 (38%), Gaps = 42/267 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIY---WP 276
               M  W  +   YL      +       +K ++W P DL++ G +    H +Y   W 
Sbjct: 495 ETNTMPQWAGSCWYYLRFIDPKNPAQVVDPAKERYWMPVDLYIGGSEHAVLHLLYSRFWH 554

Query: 277 AFLLSANL-----PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
             L  A +     P  K V     +    +K+SKS GNV++P E+I++ G DA+R + + 
Sbjct: 555 KVLFDAGVVSTPEPFKKLVHQGIVLGEDNQKMSKSRGNVVNPDEMIDQFGADAVRLYEMF 614

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    +   G++         GI   + R   +++ D   + P       S E  L
Sbjct: 615 MGPLESMKPWSTRGVE---------GITRFLDRVWRLLIGDEGALSPAVTDAEPSPEQ-L 664

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +    ++++ +++     + A++Q++   +E+ +    Q+P  L +             
Sbjct: 665 RLLHYTIKKVTDDIDALRFNTAISQMMVFTNEMTKL--EQRPRRLLEPFVLLLL------ 716

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF 478
                        F P L+ ++++ L 
Sbjct: 717 ------------PFAPHLSEELWERLG 731


>gi|154250101|ref|YP_001410926.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769391|sp|A7HMY6|SYI_FERNB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154154037|gb|ABS61269.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 913

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 15/268 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G K  +     + VWID+  ++            SK + +P DL++ G D     F
Sbjct: 506 CPKCGSKEFEKTYDTLDVWIDSGCSWEAVIR-------SKGEKFPVDLYLEGDDQHRGWF 558

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +  + A   + N P    V        +G K+SKSLGNVIDP+E++ + G D LR ++ 
Sbjct: 559 QSSIFLATAKTGNAPFKTVVTHGFIKDEQGRKMSKSLGNVIDPMEIVNKYGADILRLWVA 618

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  +    K+ ++++V  ++   + N +   +S +    +  I         D+  
Sbjct: 619 STD-FFDNIRVGKNIIEQQV--EVYRKLRNTLRYLLSNLYDFTENDILPYEKLLPLDKWA 675

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW-ELKKTNPDRASTV 447
           L    + ++++ +  +     +     +          Y D  K    ++  +     + 
Sbjct: 676 LGRLQKYIEQVTQYYEEFEYSKVYNATVKYCTTELSSIYLDILKDRLYVEAKDSIYRRSA 735

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
             V   ++  L  +L   +P  A + + 
Sbjct: 736 QTVLYYILEALIKILAPIMPFTAEEAYQ 763



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 70/231 (30%), Gaps = 16/231 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
               +     Y N   H+G A   I+ D + R+  + G  V +  G D HG  I      
Sbjct: 48  PTYLLHDGPPYANGDIHLGTAMNKILKDFVTRYKTMRGYRVPYVPGWDTHGLPIEHRVTT 107

Query: 60  --------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRIL 109
                   K+        K F  +     R+    L +  D      T    +      +
Sbjct: 108 TLGEEAKKKSPVEIRKLCKEFALKYVDIQREEFKRLGVKGDWEHPYITLTPDYEYHILDV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +K + + G++Y+G    ++         + E+ Y   +      +   V   +     + 
Sbjct: 168 FKTLVENGNVYRGNKPVYWCPTCRTALAEAEIEYHDHESPSIYVKFQMVDQPDTYVVIWT 227

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            + +          HPE+     +       V  GL     S    ++ + 
Sbjct: 228 TTPWTIPANVAIALHPEYEYLKIKVGNEYWIVADGLLQKFASETGIEFQVT 278


>gi|110802688|ref|YP_697972.1| leucyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123146264|sp|Q0SV78|SYL_CLOPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110683189|gb|ABG86559.1| leucine--tRNA ligase [Clostridium perfringens SM101]
          Length = 816

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  ARF R+ G +V    G D  G     
Sbjct: 28  KEVEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  +    +N     +    +    ++++ + T    ++   + L+ K+ +KG 
Sbjct: 88  FAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +++V  GA           V   +   +FF+++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCQTVLANEQVVDGA----CERCSTEVTKKDLTQWFFKITDYADELLD 203

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  +   I
Sbjct: 204 KLDGLDWPEKTVSMQKHWI 222



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 112/353 (31%), Gaps = 37/353 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + EE G      +     L Y             ++E            
Sbjct: 422 QRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKRETDTLDTFVCSSWYYLRY--------PDNKNTEAPFNPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K          I  ++  +   I K  +     
Sbjct: 594 YGADVFRMYLMFGFAYTEGGAWSDDGIKSVNR--FVERIERIIDTAREAISKGENNKTTM 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
             A  E +          ++ + ++      + A+A+++  ++ + +Y   ++       
Sbjct: 652 DKAEKELNYW----RHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKE------M 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLD 490
           N D          +V+     LL  F P  + + +++L    +  N  +   D
Sbjct: 702 NLD-------FLKDVVSDYLRLLAPFAPHFSEEQWNLLGNSYSIFNEAWPKFD 747


>gi|238782684|ref|ZP_04626714.1| Isoleucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238716344|gb|EEQ08326.1| Isoleucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 938

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 117/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  E +    + L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSTELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDLAEILGADAADYTKVPDTLDVWFDSGSTHSSVVD----VRPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI    +N   H  + +++   S      Y
Sbjct: 668 GFDPAQHQVKPEEMVVVDRWAVGRAQAAQAEIMAAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNQL 778



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKADFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|299140905|ref|ZP_07034043.1| isoleucine--tRNA ligase [Prevotella oris C735]
 gi|298577871|gb|EFI49739.1| isoleucine--tRNA ligase [Prevotella oris C735]
          Length = 1211

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 125/342 (36%), Gaps = 45/342 (13%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    V      +       + G  +  +   ++ VW D+ +       Y  
Sbjct: 623 FVPGDYSKENYDKVDLHRPYVDDIILVNEAGEPMKRESD-LIDVWFDSGSMPYAQQHYPF 681

Query: 247 NPDGSKAK----------------------------FWPADLHVIGKDIL--RFHAIYWP 276
             + +                               ++PAD    G D     F  ++  
Sbjct: 682 EGEIASEGLKATGKSEEEYRRELVTSTYEGIPVPPAYYPADFINEGVDQTRGWFFTLHAI 741

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + ++  ++     + +   +  KG K+SK +GNV +P E+I++ G D +R++++      
Sbjct: 742 STMVFDHVAFKNVISTGLVLDAKGNKMSKHVGNVTNPFEMIDKYGADPVRFYMITNSEPW 801

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESIL 391
            +  +D +G+ +     L   + N  S     +  + DG  P           E D  I+
Sbjct: 802 DNLKFDPNGVDE-TRRKLFGTLYNTYSFFA--LYANVDGFNPEAEQVALENRPEIDRWII 858

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           S  + +++ +   ++N    RA   + + V++   + Y   + ++ W  + +  D+ S  
Sbjct: 859 SKANSLIKGVEHELENFDPTRAGRLIDAFVNDDLSNWYVRLNRKRFWGTEMSE-DKLSA- 916

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  +  +A LL  F P  A++++  L    E+      
Sbjct: 917 YQTLYTCLMTVAKLLAPFAPFYADELYHDLGGKLESVHLDHF 958



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 69/240 (28%), Gaps = 30/240 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMKGYQVHRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V   +  +R++ + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASQKYISTEDYNKKCRENVMMFTAEWRELTEKMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           +  +T   L K++ +KG +YKG     YS       +  E+     G Y + +   V   
Sbjct: 161 KFIETLWWLLKQLYNKGLLYKGYTIQPYSPAAGTGLSSHEL--NQPGCYRDVKDTTV--- 215

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +  +    +               P    + V   V   +  +++       G  +
Sbjct: 216 -TAQFLIKDPKAEWTKHGKPYFIAWTTTPWTLPSNVALCVGPKIDYVAVETYNLYDGQPV 274


>gi|221124334|ref|XP_002162424.1| PREDICTED: similar to Valyl-tRNA synthetase [Hydra magnipapillata]
          Length = 979

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 119/390 (30%), Gaps = 93/390 (23%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---- 226
             K +   +S     +P    N   +   + ++D  +SR+   WG  I    D       
Sbjct: 408 AQKAIDAVQSGEVKFVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGNVIV 465

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNP-----DGSKAKFWPADL 260
                                ++  W  +     +T G+ +             + P+  
Sbjct: 466 ARNEAEAQAKAPGKTLRRDEDVLDTWYSSALVPFSTMGWGNEGAGTGATDDYNLYLPSST 525

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            V G DI+ F    +       +  +P             +G+K+SKS GNV+DP+++I+
Sbjct: 526 LVTGYDIIFFWVARMIMMTTHFTGRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLID 585

Query: 319 E-------------------------------------VGVDALRYFLVREIACGKDGFY 341
                                                  G DALR+      + G+   +
Sbjct: 586 GIALSPLLDKRTTGLRKPETAPAVRKNTEKEFPEGIPAYGADALRFTFAALASLGRSINF 645

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--------------AFTESD 387
           D    +     +  N + N  +R V M  +  D  +                   F++SD
Sbjct: 646 DSKRCEG--YRNFCNKLWN-ATRFVLMNCEGQDCGLMEHSKEQCAPGGVAHGYLEFSQSD 702

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
             I+S+  +   ++ +   +  +      +   V     D Y +  K      T+  + +
Sbjct: 703 RWIVSLLQKTEADVAQGFADYRLDNVANTIYDFVWNEFCDWYLEIAKVQINTGTDAQKRA 762

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T     +  +  +  +     P +  +++ 
Sbjct: 763 T-RRTLIRTLETILRMAHPITPFITEELWQ 791



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 61/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           +   I           H+GHA+   I D L R+HR+ G +  +  GTD  G       + 
Sbjct: 65  KNFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMAGFNTAWIPGTDHAGIATQIVVER 124

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                            T KV+  +       +   R M D +D S + F  T + +   
Sbjct: 125 QLQEQKVSRHDLGREAFTKKVWEWKEKSGNTITTQMRRMGDSVDWSREYF--TMDPKLSQ 182

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T    + ++ ++G IY+G     +     +  +D EV    +         P+
Sbjct: 183 TVTETFVQLYEQGLIYRGKRLVNWDPILMSAVSDLEVESEEEDGSLWHIRYPL 235


>gi|162447112|ref|YP_001620244.1| leucyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189082977|sp|A9NET8|SYL_ACHLI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161985219|gb|ABX80868.1| leucyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 803

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 82/217 (37%), Gaps = 3/217 (1%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+A   H+GH       D+++RF R+ G +VL   G D +G    + A 
Sbjct: 32  QKYYVLDMFPYPSASGLHVGHIEGYTATDIVSRFKRMQGYNVLHPMGWDAYGLPSEQYAL 91

Query: 64  NAGVTTKVFVDQNSRNFRDMA--DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K F  QN  NF+         + +D  + TT+  +    + ++K++ +KG    
Sbjct: 92  ATGKDPKSFTYQNISNFKRQIIEMGKGVDWDKELATTDPEYFKWTQWIFKRLYEKGLAVL 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +DE+            H PV       +  R++ Y D+LL    
Sbjct: 152 KDVEVNWCEGLGTVLANDEIEIINGQMVSERGHYPVIKKPMRQWVLRITEYADRLLDDLA 211

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                    E +   I      + +  ++   + + I
Sbjct: 212 LVDWPENLKEMQRNWIGKSSGAVIEFEVASTDYKFEI 248



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 46/243 (18%)

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P DL+V G +    H +Y   +         +S+  P  K V     +     K+SKS G
Sbjct: 528 PVDLYVGGTEHAVGHLLYARFWHKFFYDLGFVSSKEPFMKLVNQGMILGADHSKMSKSKG 587

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N + P + I+  G DALR F +       +  +  +GL+         G    + R   M
Sbjct: 588 NSVSPDDFIQSHGADALRLFEMFMGPLEAEKPWSNEGLE---------GAKRFLDRVWRM 638

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
              D++       A       + +V  + ++++ E+ +    + A++Q++  V+EV +  
Sbjct: 639 F--DFEITQQPVDA-------LQTVYHQTVKKVTEDYEKLAFNTAISQMMIFVNEVYK-- 687

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                                +     R    LL    P L  +I + +    E+  +  
Sbjct: 688 ------------------TKVIGAAQARGFLKLLNPIAPHLTEEINETVLKHHEDLVYSE 729

Query: 489 LDQ 491
              
Sbjct: 730 WPT 732


>gi|310796691|gb|EFQ32152.1| isoleucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 1079

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 73/460 (15%), Positives = 154/460 (33%), Gaps = 36/460 (7%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRHHDTC 106
           D+ G   ++ +   G+  K       ++ +    ++  S     Y    R+     +   
Sbjct: 349 DDSGHFTSRVSDFVGMHVKEADKHIIKHLKAAGKIVVDSTLKHSYPMCYRSDTPLIYRAV 408

Query: 107 RILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              +    + +    +  KG +     +++  + +  E  +  +         P+     
Sbjct: 409 PSWFVRIPEIVPQMLENIKGSHWVPSFVKERRFASWIENARDWNVSRNRYWGTPIPLWVS 468

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           E    R+     K L     +   +  + R N     + S +   +L R           
Sbjct: 469 EDMEERVCVGSIKELRELSGYTGDLTDLHRDNIDHITIPSKMGKGTLKRI---------- 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
             + +   W ++ +    +  Y         K +P D    G D     F+ +      L
Sbjct: 519 --EEVFDCWFESGSMPYASQHYPFENVDKFEKSFPGDFIAEGLDQTRGWFYTLLVLGTHL 576

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
              +P    V +   +   G+K+SK L N   P  V+++ G DALR +L+       +  
Sbjct: 577 FGRIPFKNCVVNGIVLAEDGKKMSKRLKNYPVPDLVMDKYGSDALRLYLINSPVVRAEPL 636

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTES------DESIL 391
            + + G+K+ V   L   + N        +  LK  + +         +      D  IL
Sbjct: 637 RFKESGVKEVVQKVLLP-LWNSYKFFEGQVSLLKKVESIDYAWNPKALASNENVMDRWIL 695

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           + C  +LQ + E M    ++  + +++ L+ +  + Y    +     +         L  
Sbjct: 696 ASCQSLLQFVNEEMSAYRLYTVVPRLLGLIENTTNWYIKLNRRRLKGENGVQDTQHALNT 755

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
             EV+  L   L  F P + + I+  L  F+  E     +
Sbjct: 756 LFEVLFTLCRGLAPFTPFITDTIYQKLRPFIPKEAEAEDA 795



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 19/146 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKPLYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGFHVERRFGWDTHGLPIEHE 89

Query: 62  A-----------------QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     +  V + S  +R   + L   I +D+  +T +   
Sbjct: 90  IDKKLGISGKAAVMKLGLKNYNAECRSIVMRYSEEWRHTVERLGRWIDFDNDYKTMDPSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWY 128
            ++   ++K++ DKG +Y+G     Y
Sbjct: 150 MESEWWVFKQLFDKGAVYQGHRVMPY 175


>gi|254252588|ref|ZP_04945906.1| Valyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895197|gb|EAY69077.1| Valyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 954

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 130/408 (31%), Gaps = 60/408 (14%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +      +  ++    + + +     N Q   V       Y+  L   QD  +S  
Sbjct: 362 QWFVAMTKPAPEGTFHPGKSITEVSLDVVRNGQIKFVPENWTTTYYQWLENIQDWCISRQ 421

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLT 240
                 I      N  +   ++  +  + +      G  +  D   ++  W  +     +
Sbjct: 422 LWWGHQIPAWYGENGEVFVARNDEEARAQAAAKGYTG-ALKRDED-VLDTWFSSALVPFS 479

Query: 241 TTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH 298
           + G+ +        F P+ + V G DI+ F    +       +  +P             
Sbjct: 480 SLGWPNETP-ELQHFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFHTVYVHGLVRDA 538

Query: 299 KGEKISKSLGNVIDPIEV-------------------------------------IEEVG 321
           +G+K+SKS GN +DPI++                                     I   G
Sbjct: 539 EGQKMSKSKGNTLDPIDIVDGIDLEALVAKRTTGLMNPKQAATIEKKTRKEFPDGIPAFG 598

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            DALR+ +      G++  +D    +     +  N + N  +R V M  + +D  +    
Sbjct: 599 TDALRFTMASMATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGLDKQA 655

Query: 382 ------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                        F+ +D  I+S+  R   +I +   +         +   V +   D Y
Sbjct: 656 CGAGDCGPGGYLDFSAADRWIVSLLQRTEADIAKGFADYRFDNIATSIYKFVWDEYCDWY 715

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +  K  +++   P++        + V+  +  L    +P +   ++ 
Sbjct: 716 LELAKV-QIQNGTPEQQRATRRTLLRVLETVLRLAHPIIPFITEALWQ 762



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    I           H+GHA+   I D LAR+HR+ G + L+  GTD  G       +
Sbjct: 37  RPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIVVE 96

Query: 64  NAGVT----------------TKVFVDQ----NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   +  +     +   R +    D S + F  T + +  
Sbjct: 97  RQLDAQGVSRHDLGREKFVERVWEWKQKSGSTITGQVRRLGASTDWSREYF--TMDDKMS 154

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              R ++ K+ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 155 AAVRDVFVKLYEQGLIYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIRYPL 208


>gi|226329206|ref|ZP_03804724.1| hypothetical protein PROPEN_03109 [Proteus penneri ATCC 35198]
 gi|225202392|gb|EEG84746.1| hypothetical protein PROPEN_03109 [Proteus penneri ATCC 35198]
          Length = 936

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/405 (15%), Positives = 133/405 (32%), Gaps = 45/405 (11%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRD------EAYYNDDEVYKGADGQYYNAQ----HNPVQ 158
           + + + +KG +                     +    + + G D      Q       V+
Sbjct: 382 IVELLKEKGALLHHEALQHSYPCCWRHKTPVIFRATPQWFIGMDKNGLRQQSLKEIKGVK 441

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD- 215
           W+ + G     S  +++          +  P+      E        L+ +    K  + 
Sbjct: 442 WIPDWGQARIESMVENRPDWCISRQRTWGTPMSLFVHKETQEPHPRTLELMEEVAKRVEV 501

Query: 216 WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
            GI+   D                    + VW D+ + + T         G+      AD
Sbjct: 502 SGIQAWWDLDIREVLGDDADDYMKTPDTLDVWFDSGSTHSTVVDARPEYHGNS-----AD 556

Query: 260 LHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +V+
Sbjct: 557 MYLEGSDQHRGWFMSSLMISTAIKGKAPYREVLTHGFTVDGQGRKMSKSIGNTVSPQDVM 616

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           +++G D LR ++      G+    D+     + +AD    I N   R     L  +D   
Sbjct: 617 DKLGADILRLWVASTDYTGEIAVSDE---ILKRSADTYRRIRNTA-RFFLANLNGFDPAK 672

Query: 378 P--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
               P      D   +        +I ++ +N   H  + +++   S      Y D  K 
Sbjct: 673 HQVKPEEMVTLDRWAVGRAKAAQADILKHYENYDFHNVIQRLMQFCSVEMGSFYLDIIKD 732

Query: 434 WEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +   K++     +       +   L   +   +   A++I++ L
Sbjct: 733 RQYTAKSDSVARRSCQTALFHICEALVRWMAPVMSFTADEIWNEL 777



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 16/166 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +         +   +  FR+                     +  +  + ++   GD  K
Sbjct: 106 VEQIVGKPGEKIS--AAQFREECRKYAY-----------EQIEAQKKDFIRLGVLGDWEK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
              +  Y            +       +      PV W    G   
Sbjct: 153 PYLTMDYKTEANTIRALARIIAN---GHLLKGAKPVHWCTACGSSL 195


>gi|269115081|ref|YP_003302844.1| Leucyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322706|emb|CAX37441.1| Leucyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 805

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 3/211 (1%)

Query: 3   EREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +K YI     YP+    H+GH       D++AR+ RL+G DVL   G D  G    + 
Sbjct: 27  SNKKAYILDMFPYPSGMGLHVGHLEGYTATDIIARYKRLNGFDVLHPIGWDAFGLPAEQY 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N  NFR     +  SYD    + TT+ + +   + ++K++  +G  
Sbjct: 87  AIKTGNDPEPFTLKNIANFRRQLQAMGFSYDYDKEVNTTDPKFYIWTQWIFKEMYKQGLA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         ++E+ +    +     + PV     + +  +++AY DKLL  
Sbjct: 147 SIEEIDVNWCEGLGTVLANEEILEKNGIKVSERGNFPVVKKPMKQWVLKITAYADKLLEG 206

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            E         + +   I   K  +   ++S
Sbjct: 207 LEDLDWPESLKQLQRNWIGRSKGHIVKWNIS 237



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 125/344 (36%), Gaps = 45/344 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + EE   +      +   +   +       P+      ++   +
Sbjct: 417 WIFSRQRYWGEPFPVLFDEENNIYLVKELVELPKIKNIKPSGTTSGPLANVESWMNVEIN 476

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G K    +     W         Y+ Y+  +   +Y             +    P DL++
Sbjct: 477 GKKYHHDTNVMPQWAGSSWY---YLAYILKNPDGSYTPLNSSEAKKRFEEWM--PVDLYI 531

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++    H +Y   +         ++   P  K +     +   G+K+SKSLGNVI+P 
Sbjct: 532 GGQEHAVLHLLYARFWHRFLFDLGIVNTKEPFTKLINQGLIMGPDGQKMSKSLGNVINPD 591

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           + I   G D+LR + +      +   +  D L             N + R +  I   ++
Sbjct: 592 DFILSHGADSLRVYEMFMGPLVESKSWSTDSL-------------NGIRRWIEKIYNIFE 638

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             +        S+  ++S  ++++ E+ EN++    + A+++++   +    Y  +    
Sbjct: 639 YFVKGNIDINNSNNELISNINKLILEVSENIEKTKFNIAISKMMVFTN----YLTS---- 690

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                      T+      V++Q AILL  F P LA ++  +L 
Sbjct: 691 ---------LKTIPSS--FVLKQFAILLSPFAPFLAEELLFMLN 723


>gi|264679678|ref|YP_003279585.1| valyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262210191|gb|ACY34289.1| valyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 971

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 118/376 (31%), Gaps = 66/376 (17%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFI---LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E +    + + + +  +  S   +    +P     E   +V     +          G 
Sbjct: 414 PENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEEGNIYVAKNEAEAQAQADKVSPGK 473

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPADLHVIGKDILRFH--AI 273
           K+  D   ++  W  +     +T G+ +           + P+ + V G DI+ F    +
Sbjct: 474 KLTRDAD-VLDTWYSSAMVPFSTMGWPEQGHAADDDFNLYLPSSVLVTGYDIIFFWVARM 532

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P             +G+K+SKS GNV+DP+++I+               
Sbjct: 533 IMMTTHFTGRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGISLEPLLEKRTTGL 592

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+      + G+   +D    +     +  N
Sbjct: 593 RKPETAPQVRKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCN 650

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEIR 402
            + N  SR V M  + +D  +                   F++ D  I S   +V  E+ 
Sbjct: 651 KLWN-ASRFVLMNCEGHDCGLAPHTKDQCQPGGEFAGYMHFSQPDRWISSQLQKVEAEVA 709

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +      +      +   V     D Y +  K  +++  N  +        +  +  +  
Sbjct: 710 KGFAEFRLDNVANTIYDFVWNEFCDWYLEIAKV-QIQTGNEAQQRATRRTLIRTLEAILR 768

Query: 461 LLQAFVPKLANKIFDI 476
           L    +P +  +++  
Sbjct: 769 LAHPIIPFVTEELWQQ 784



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 56/176 (31%), Gaps = 22/176 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA+   I D L R+HR+ G +  +  GTD  G       +  
Sbjct: 56  NFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGTDHAGIATQIVVERQ 115

Query: 66  GVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             T            F  +                R M D +D S + F  T + +    
Sbjct: 116 LQTQGVSRYDLGRDEFTKKVWEWKEKSGDTITTQMRRMGDTVDWSREYF--TMDDKLSKV 173

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               + K+  +G IY+G     +    ++  +D EV              P+   E
Sbjct: 174 VTETFVKLYQQGLIYRGKRLVNWDPVLQSAVSDLEVENQEKDGSLWHIAYPLTSGE 229


>gi|322501259|emb|CBZ36338.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 967

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 86/477 (18%), Positives = 139/477 (29%), Gaps = 108/477 (22%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQH 154
            H+  +++   +     +        +  R E     +E+                    
Sbjct: 307 RHNLQQLVMMDLKGYVTMEPFKGMHRFDCRREIVKKLEEMGLLRGVEPYEYRVGRCERTG 366

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + V+ M    +F   S    + +    +    + P         +++  +K   +SR+  
Sbjct: 367 DIVEPMLMPQWFIDCSDMARRSVEAVRNGDLRLYPPSHEAVWYHWLE-NIKPWCVSRQ-L 424

Query: 215 DWGIKIP-----------DDPQ---------------------------------YIMYV 230
            WG +IP            DP                                   ++  
Sbjct: 425 WWGHRIPAYKVVGSLPKDVDPWVVARNLQEAHAKAKKKFGLTDEQVAEASFEQDPDVLDT 484

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KK 289
           W  +      T G+  + D  K +F+P  L   G DIL F         L     LP K+
Sbjct: 485 WFSSGLWPFATLGWPTDSDDMK-RFFPNSLMETGHDILFFWVARMVMLSLHFTNKLPYKE 543

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIE------------------------------ 318
           VF H  +  K GEK+SKS GNVIDP+ VI                               
Sbjct: 544 VFLHAMVRDKNGEKMSKSKGNVIDPLYVIHGVSLQTLHNTVRSGNLGDKEVEKAIKQQKE 603

Query: 319 -------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
                  E G DALR+ L+     G+    D   +         N + N+V   +   L 
Sbjct: 604 FFPEGIPECGSDALRFGLLSYTQSGRSVNLDIQRVVA--YRQFCNKLWNVVRYVLYHALG 661

Query: 371 ------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLV- 421
                 K                  ILS     + E  + M         A   V     
Sbjct: 662 TDYVPSKQQFSPAEDAAMLPLECRWILSRLDAAIAEATQGMSEGLYDFALATGAVYRFWL 721

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  KP   K     +   V  V + V+ +   LL   +P L  +++  L
Sbjct: 722 HELCDVFLELTKPTIQKGGEKQQL--VQDVLLHVVEKALRLLHPMMPFLTEELWHRL 776



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D L RFHR+ G + L+  GTD  G       + 
Sbjct: 37  KPFVIIAPPPNVTGYLHLGHALTGAVQDTLIRFHRMKGDNTLYLPGTDHAGIATQVVVER 96

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                     F   ++    +    + +S D      T +++    
Sbjct: 97  RVMKEEGKSRHDLGRDEFMKRLWEFKKNHAGMITEQFRRIGLSLDWTRERFTMDEQSSAA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++ + G +++      +    ++  +D EV  
Sbjct: 157 VVEAFVRLHEDGLVHRDTRLVNWCCALQSAISDLEVEF 194


>gi|299533178|ref|ZP_07046562.1| valyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718708|gb|EFI59681.1| valyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 971

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 118/376 (31%), Gaps = 66/376 (17%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFI---LPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            E +    + + + +  +  S   +    +P     E   +V     +          G 
Sbjct: 414 PENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEEGNIYVAKNEAEAQAQADKVSPGK 473

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFWPADLHVIGKDILRFH--AI 273
           K+  D   ++  W  +     +T G+ +           + P+ + V G DI+ F    +
Sbjct: 474 KLTRDAD-VLDTWYSSAMVPFSTMGWPEQGHAADDDFNLYLPSSVLVTGYDIIFFWVARM 532

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE-------------- 319
                  +  +P             +G+K+SKS GNV+DP+++I+               
Sbjct: 533 IMMTTHFTGRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGISLEPLLEKRTTGL 592

Query: 320 -----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                   G DALR+      + G+   +D    +     +  N
Sbjct: 593 RKPETAPQVRKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCN 650

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEIR 402
            + N  SR V M  + +D  +                   F++ D  I S   +V  E+ 
Sbjct: 651 KLWN-ASRFVLMNCEGHDCGLAPHTKEQCQPGGEFAGYMHFSQPDRWISSQLQKVEAEVA 709

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +      +      +   V     D Y +  K  +++  N  +        +  +  +  
Sbjct: 710 KGFAEFRLDNVANTIYDFVWNEFCDWYLEIAKV-QIQTGNEAQQRATRRTLIRTLEAILR 768

Query: 461 LLQAFVPKLANKIFDI 476
           L    +P +  +++  
Sbjct: 769 LAHPIIPFVTEELWQQ 784



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 56/176 (31%), Gaps = 22/176 (12%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA+   I D L R+HR+ G +  +  GTD  G       +  
Sbjct: 56  NFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGYNTAWIPGTDHAGIATQIVVERQ 115

Query: 66  GVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             T            F  +                R M D +D S + F  T + +    
Sbjct: 116 LQTQGVSRYDLGRDEFTKKVWEWKEKSGDTITTQMRRMGDTVDWSREYF--TMDDKLSKV 173

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               + K+  +G IY+G     +    ++  +D EV              P+   E
Sbjct: 174 VTETFVKLYQQGLIYRGKRLVNWDPVLQSAVSDLEVENQEKDGSLWHIAYPLTSGE 229


>gi|319792088|ref|YP_004153728.1| valyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315594551|gb|ADU35617.1| valyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 959

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 129/417 (30%), Gaps = 96/417 (23%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLS-------AYQDKLLSYYESHPEFILPIERRNEVISFV 200
                    V+ M  + ++  ++       +   K +   +S     +P    N   +  
Sbjct: 362 PRCARSGAIVEPMLTDQWYVAMTRPGADGQSIAQKAIDVVKSGEVRFVPENWVNT-YNHW 420

Query: 201 KSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV-------------------------WID 233
              ++D ++SR+   WG  I    D +  +YV                         W  
Sbjct: 421 MENIQDWTISRQ-LWWGHQIPAWYDEEGNVYVAESEADAQAKAPGKKLTRDEDVLDTWYS 479

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           A     ++ G+          + P+ + V G DI+ F    +          +P      
Sbjct: 480 AALVPFSSLGWPAKTQ-DLELYLPSQVLVTGYDIIFFWVARMIMMTKHFIGKVPFKDVYM 538

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEE-------------------------------- 319
                  +G+K+SKS GNV+DP+++I+                                 
Sbjct: 539 HGLVRDAQGKKMSKSEGNVLDPVDLIDGIQLPELLDKRTQGLRKPETAPAVRKNTQKEFP 598

Query: 320 -----VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
                 G DALR+      + G++  +D    +     +  N + N  +R V M  +  D
Sbjct: 599 DGIPAFGADALRFTFASLASLGRNINFDSKRCEG--YRNFCNKLWN-ATRFVLMNCEGQD 655

Query: 375 GMIPTPGA--------------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             +                   F+ +D  I+S   RV  E+ +  +   +      +   
Sbjct: 656 CGLMEHTKEECKVGGPAHGYLKFSRADYWIVSQLQRVEAEVAKGFEEYRLDNVANAIYQF 715

Query: 421 VSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             +   D Y +  K       +  + +T     +  +  L  L    +P +  +++ 
Sbjct: 716 AWDEFCDWYLEIAKVQIQTGDDSQKRAT-RRTLIRTLETLLRLAHPIIPFITEELWQ 771



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 22/172 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK----IAKAA 62
             I           H+GHA+   + D L R+HR+ G + L+  GTD  G      + +  
Sbjct: 56  FAIQLPPPNVTGTLHMGHAFNQTVMDSLTRYHRMKGDNTLWVPGTDHAGIATQIVVERQL 115

Query: 63  QNAGVTTKVFVDQNS----------------RNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           Q   ++      +N                 +  R M D +D S + F  T +       
Sbjct: 116 QEQKISRHDLGRKNFVARVWEWKEKSGNTITQQMRRMGDTVDWSREYF--TMDDDLSAVV 173

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              + K+ ++G IY+G   G +    +   +D EV    +         P++
Sbjct: 174 TQTFVKLYEEGLIYRGKRLGNWDPVLKTSVSDLEVESEEEDGSLWHIAYPLE 225


>gi|171060298|ref|YP_001792647.1| valyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170777743|gb|ACB35882.1| valyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 953

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 134/425 (31%), Gaps = 104/425 (24%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSA-------YQDKLLSYYESHPEFILPIERRNEVISFV 200
                    ++ M  + +F  ++          ++ +   +S     +P    N   +  
Sbjct: 348 PRCARTGQIIEPMLTDQWFVAMTKQGANGKSIAEEAIEAVDSGDVQFVPENWVNT-YNQW 406

Query: 201 KSGLKDLSLSRKTFDWGIKIP-------------------------------DDPQYIMY 229
              ++D  +SR+   WG +IP                                  + ++ 
Sbjct: 407 MKNIQDWCISRQ-LWWGHQIPAWYGSSGELFVARNEDEARAKATAAGYTGELTRDEDVLD 465

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLP 287
            W  +     +T G+ +     +  F P+ + V G DI+ F    +       +  +P  
Sbjct: 466 TWYSSALVPFSTLGWPEQTL-EQDLFLPSSVLVTGYDIIFFWVARMIMMTKHFTGRVPF- 523

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVI----------------------------- 317
           K V+ HG +L   G+K+SKS GNV+DP+++I                             
Sbjct: 524 KHVYIHGLVLDAHGKKMSKSEGNVLDPVDLIDGIALPELLDKRSTGLRKPENAPKVRKAT 583

Query: 318 --------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                      G DALR+      + G+   +D    +     +  N + N  +R V M 
Sbjct: 584 EKEFPDGIPGYGADALRFTFASMASLGRSVNFDSKRCEG--YRNFCNKLWN-ATRFVLMN 640

Query: 370 LKDYDGMIPTPG--------------AFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            +  D  +                   F+ +D  I S   RV   + +      +    +
Sbjct: 641 TEGQDCGLMAHTQAECSVGGPAHGYLNFSPADRWITSELQRVESTVEQGFAEYRLDFVAS 700

Query: 416 QVISLVSE--VDRYFDAQKP---WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
            +   V +   D Y +  K          +   A       + V+  +  LL    P + 
Sbjct: 701 AIYQFVWDEYCDWYLEIAKVQLNEAKAAGDEASARATRRTLIRVLETILRLLHPVTPFIT 760

Query: 471 NKIFD 475
            +++D
Sbjct: 761 AELWD 765



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 18/177 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       +
Sbjct: 36  KASFCIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGDNTLWVPGTDHAGIATQIVVE 95

Query: 64  NAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                   + +Q+          +   +S+     T + +    
Sbjct: 96  RQLQAQGVSRHDLGRKNFVAKVWEWKEQSGSTITTQMRRMGDSVSWPHEYFTMDPKLSKV 155

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
               + ++ D+G IY+G     +    ++  +D EV    +         PV   +E
Sbjct: 156 VTETFVRLFDEGLIYRGKRLVSWDPILKSAVSDLEVESEEEDGSLWHIRYPVDGSDE 212


>gi|238797503|ref|ZP_04641001.1| Isoleucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238718644|gb|EEQ10462.1| Isoleucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 938

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 116/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSIELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----VRPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           EV+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 EVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI    +N   H  + +++   S      Y
Sbjct: 668 GFDPAQHQVKPEEMVVVDRWAVGRAQAAQAEIMAAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNQL 778



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKADFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|50556490|ref|XP_505653.1| YALI0F20218p [Yarrowia lipolytica]
 gi|49651523|emb|CAG78462.1| YALI0F20218p [Yarrowia lipolytica]
          Length = 1047

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 79/526 (15%), Positives = 156/526 (29%), Gaps = 90/526 (17%)

Query: 35  ARFHRLDGLDVLFT-------TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
            R+  L G  V            TD     +        +T     +      R   + +
Sbjct: 341 KRYAHLHGKTVDHPFLDRTIPIVTDAEAVDMEFGTGAVKITPAHDPNDYLTGKRQNLEFV 400

Query: 88  DISYDDFIRTTEKRHHDTC--------RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           +I  D+   T  +   D          + + +K+ + G       +           +  
Sbjct: 401 NILNDN--GTLNEACGDFAGLKRFDARKKVIEKLKEVGLFENQTANPMSVPTCAKSGDVI 458

Query: 140 EVYKGADGQYYNAQHNPV------------QWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
           E          N +   V                 E  +F+            +      
Sbjct: 459 EPLLKPQWWVRNKEQADVAMEAVRDGRITITPKTSESEYFQWLGNIQDWCISRQLWWGHR 518

Query: 188 LPIERRN------------EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            P+   N            +     ++  +    +   F       +  + ++  W  + 
Sbjct: 519 APVYFVNLESEADQDKEDGKWWIAGRTEDEAREKAAAKFGTDKFTLEQDEDVLDTWFSSG 578

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
               +  G+ D        F+P  +   G DIL F    +      L+ ++P  ++VF+H
Sbjct: 579 LWPFSLLGWPDKTK-DMETFYPMTMLETGWDILFFWVARMIMLGIKLTGDIPF-REVFTH 636

Query: 294 GFILH-KGEKISKSLGNVIDPIEVI----------------------------------- 317
             +   +G K+SKSLGNVIDP++VI                                   
Sbjct: 637 SLVRDAQGRKMSKSLGNVIDPLDVISGIPLKDLHAKLHQGNLDPREVKKAEDGQTMSFPN 696

Query: 318 --EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-- 373
              E G DA+R+ L      G+D   D + ++        N + N    ++  +  DY  
Sbjct: 697 GIPECGTDAMRFALCAYTTGGRDINLDINRVEG--YRKFCNKMYNATKFALMRLGDDYVP 754

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                     +  ++ IL   +   +   E +Q+     +   V +       D Y +  
Sbjct: 755 PASDAPGKDLSLVEKWILHKYTHAAKTADEALQHNNFMDSTTAVYNFWLYELCDVYIENS 814

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K   L  T P++  +        +     ++  F+P L  +++  L
Sbjct: 815 KFLILSGT-PEQQKSARDTLYTCLEGAIKMMHPFMPYLTEELWQRL 859



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 74/249 (29%), Gaps = 23/249 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++    I           HIGH   + + D L RFHR+ G  VL+  G D  G      
Sbjct: 121 KDKGLYVIPIPPPNVTGALHIGHGLTVALQDGLIRFHRMKGKTVLYVPGFDHAGISTQSV 180

Query: 62  AQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                         + +      ++    L  SYD      T ++  
Sbjct: 181 VEKMLWAKEKKTRHDLGREKFTDLVWEWKEDYHVRIKNQLKKLGASYDWSREAFTLDQPR 240

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK----GADGQYYNAQHNPVQ 158
                  + ++ ++G IY+      + +      ++ EV      G           PV+
Sbjct: 241 TKAVNEAFCRLHEEGVIYRASRLVNWCVALNTTLSNLEVENKEIDGFTKMNVPGYDEPVE 300

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +     + ++++   +KL                         + L   ++     D  I
Sbjct: 301 FGVLTHFSYKVTGSDEKLTVATTRVETMFGDTGIAVHPDDKRYAHLHGKTVDHPFLDRTI 360

Query: 219 KIPDDPQYI 227
            I  D + +
Sbjct: 361 PIVTDAEAV 369


>gi|194360509|gb|ACF57902.1| methionyl-tRNA synthetase [Actinomyces israelii]
          Length = 168

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGRKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ +MI K +   +P PG     D ++L         +   +       AL
Sbjct: 61  VAGWGNLVNRTATMIHKRFG-AVPAPGGLEPIDAALLDSIEAGFDAVGGLIARHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
           A+ + LV E ++Y    +P++LK  +P   +R +T+L+   + +  L
Sbjct: 120 AEAMRLVGEANKYIADTEPFKLKGQDPATQERLATILHTLAQAVADL 166


>gi|71894327|ref|YP_278435.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851115|gb|AAZ43724.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 765

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 6/208 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K Y+ +   YP+ Q H+GH     I D +AR++R +  +VL   G D  G     AA  
Sbjct: 30  PKKYVLSMFPYPSGQLHMGHVRNYTIGDAIARYYRKNNFNVLHPFGWDAFGLPAENAAIK 89

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
             +  K +  +N      +   L IS+  +  + T +  +    + ++ K  +   IY+ 
Sbjct: 90  NNIHPKKWTYENIETMNKVIKELGISFSWNRELATCDNDYTKWEQYIFLKFLENNLIYRK 149

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +  +D     +++V             N +Q  E E Y+ +++ Y ++LL+  + 
Sbjct: 150 KSLLNFCEQDNTVLANEQVIDNK----CWRCDNEIQKKELETYYLKITKYANELLADLKL 205

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLS 210
                     + +     K        S
Sbjct: 206 LENKWPSEVLKMQKNWIGKKKFFKTQFS 233



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 112/343 (32%), Gaps = 46/343 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   ++ G           LL           P+E  N+     K 
Sbjct: 374 WGISRQRYWGTPIPIVKCQKCGIVPEKLENLPVLLPDDVVFNVSGNPLE-SNQKWIQTKC 432

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
              +L   R+T         D  +    +    T                  +   D ++
Sbjct: 433 PNCNLDAQRET------DTLDTFFESSWYFLRYTTPKDLRWNQIFDQAQLKYWNSVDEYI 486

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F         +    P    + + G +L  G K+SKS GNV+ P 
Sbjct: 487 GGIEHAILHLLYARFFTKALVDLKLIDFKEPF-SSLLTQGMVLKDGFKMSKSKGNVVAPT 545

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK--D 372
           ++IE+ G DA R F++      K+  +   GL               ++  V  I K   
Sbjct: 546 DMIEKYGADATRLFILFATTPSKELEWSDLGLIG------CFKFLTRLTDKVKFINKSGK 599

Query: 373 YDGMIPTPGAFTESDESILSVC--SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           ++           +   +      ++ + E++EN      +  ++  +     ++ Y   
Sbjct: 600 FEVHENLTKEQKLARYKLYLSLVKNKEIFEVKEN--EYAFNTLISWSMET---LNEY--- 651

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                   +N + ++ +     E+   L  +L+ F+P LA  I
Sbjct: 652 --------SNEEDSNLIT----EMFYVLTYVLEPFIPHLAWDI 682


>gi|312898161|ref|ZP_07757552.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
 gi|310620658|gb|EFQ04227.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
          Length = 931

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 105/290 (36%), Gaps = 23/290 (7%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            +  +  + L    K  + G         IM VW D+   +                 +P
Sbjct: 505 WWAHTEKELLPEGFKCPECGCTEFRKESDIMDVWFDSGCTHQGVLC------HDPELAYP 558

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F++    +   +   P    +     +  +G K+SKS+GN + P E
Sbjct: 559 ADMYLEGSDQHRGWFNSSLLTSVAANGIAPYKAVLTHGFTVDGEGRKMSKSVGNTVAPQE 618

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI++ G D +R ++      G D       LK+       + +   +  +   +L + + 
Sbjct: 619 VIDQYGADVMRLWVSSADYQG-DVRLSPKILKQ------LSDVYRKIRNTFRFLLGNIND 671

Query: 376 MIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
             P   A      +E D+  L    +VL+ + E  +N   H     + +   V     Y 
Sbjct: 672 FNPETDAVSYKDMSEIDKWALLRLEQVLETVTEAYENYQFHVMYHTIHNFCTVDLSSIYL 731

Query: 429 DAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K     +KT+     +       ++  L  ++   +   A +++  +
Sbjct: 732 DVTKDRMYTEKTDARERRSAQTAMYIILDTLVKIVSPVLSFTAEEVWKYM 781



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N + HIGHA   ++ D++ ++    G    +  G D HG  I  A   
Sbjct: 48  KKFILHDGPPYANGKLHIGHALNKVLKDIILKYKTQQGFYTKYVPGWDTHGLPIEHAVIK 107

Query: 65  ------AGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                   ++          +        R       +   +D    T  K        +
Sbjct: 108 ETGLNRHEMSPLDLRKRCHDYALARVDEQRADFIRFGVLGEWDYPYLTLAKHVEVAQIGV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  ++ KG IYKG  + ++    E    + E+  
Sbjct: 168 FGTMAKKGYIYKGLKAVYWCPHCETALAEAEIEY 201


>gi|193794350|gb|ACF21387.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794354|gb|ACF21389.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
 gi|193794458|gb|ACF21441.1| methionyl-tRNA synthetase [Actinomyces naeslundii]
          Length = 168

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P PG   + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPGELQDIDRALLDAVEAGFVFVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P+   R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGDDPETQARLATVLHTLAQVVTDL 166


>gi|320354487|ref|YP_004195826.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122989|gb|ADW18535.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 935

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/312 (17%), Positives = 103/312 (33%), Gaps = 19/312 (6%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           + K    D          G +       I+ VW D+  ++                 WPA
Sbjct: 502 WFKHEAADFVPEGVACSCGGREFKKESDILDVWFDSGVSHAAVVEQRP------ELRWPA 555

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL++ G D     F +    +       P    +     +  +G+K+SKS+GNV+ P +V
Sbjct: 556 DLYLEGSDQHRGWFQSSLLTSVGTRGRAPYQGVLTHGYVVDGQGKKMSKSVGNVVAPQQV 615

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DG 375
           I++ G + LR ++  E     D     + LK    +D    + N +   +S +     + 
Sbjct: 616 IDQYGAEVLRLWVASENYQ-DDVKVSDEILK--HVSDAYRKMRNTLRFLLSNLYDFAPER 672

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP 433
                    E D   L+  + + + +         H     + +         Y D  K 
Sbjct: 673 DAVDVSDLQEIDRWALAKYAELSERVTRAYDRYEFHAIYHALHNFCGTTISSIYMDVLKD 732

Query: 434 WEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS--L 489
                    P+R      V   ++  L  L+   +   A + ++ L    +N   +    
Sbjct: 733 RLYCSAPAGPER-RAAQTVIYRILDGLLRLMSPILCFTAAEAWEHLHGLSDNTPLEQSIF 791

Query: 490 DQRLKPGFMLHK 501
             R  P   + K
Sbjct: 792 FTRFAPVDDIGK 803



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 17/173 (9%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +R    +     Y N   H+G A+  ++ D++ R  R+ G +  +  G D HG  I  
Sbjct: 44  MADRPLFILHDGPPYANGNIHLGTAFNKVLKDIILRSKRMAGFNAPYIPGWDCHGLPIEH 103

Query: 61  AAQNAGVTTKV-------------FVDQNSRNFRDMADVLDISYDD---FIRTTEKRHHD 104
                    K              + ++  +  R+    L +  D    ++  +      
Sbjct: 104 NVDLELGAKKQAISTLGKRSACRSYAEKWIKTQREQFKRLGVLGDWSNPYLTMSFPYEAI 163

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             R  + K    G + +     ++         + EV              PV
Sbjct: 164 IARE-FNKFLLSGAVVRSKKPVYWCATCGTALAEAEVDYADHTSPSVYVKFPV 215


>gi|227486701|ref|ZP_03917017.1| leucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235289|gb|EEI85304.1| leucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 800

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+ Q  H+GH       DV+AR  RL+G +V++T G D  G      
Sbjct: 30  NKKKFYPLVEFPYPSGQGLHVGHPRPYTAIDVVARKRRLEGENVMYTMGWDAFGLPAENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +  ++N  +FR   + +  S+  D  I TT+  ++   + ++ ++   G  
Sbjct: 90  AIANKIHPAIITEKNIDHFRGQMESIGFSFDWDREINTTDPEYYKWTQWIFLQMYKMGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK   S  +         ++EV  G            V+   +  +  +++AY D+L+  
Sbjct: 150 YKSETSVNWCPSCLVGLANEEVVDGK----CERCGADVEHKLKNQWMLKITAYADRLIDD 205

Query: 180 Y 180
            
Sbjct: 206 L 206



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 118/367 (32%), Gaps = 69/367 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+ + E+ G+           L                 E  +   +
Sbjct: 418 WVFSRQRYWGEPIPMVYCEDCGWVPVDEKDLPVKLPEI--------------ESYTPTAT 463

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP----DGSKAK 254
           G   L+   +  +        P       M  W  +   YL      +        +   
Sbjct: 464 GESPLAKIDEFVNTTCPHCGKPAKRETDTMPQWAGSSWYYLRYADPHNKDALASKEALDY 523

Query: 255 FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           + P D +  G +    H +Y   +         +    P  K+      +   G+K+SKS
Sbjct: 524 YTPVDWYNGGMEHTTLHLLYSRFWHKVLYDIGVVPTKEPYMKRTSHGMILGPDGQKMSKS 583

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVI+P ++I + G D LR + +          +  +G+K              V   +
Sbjct: 584 RGNVINPDDIIRDFGADTLRTYEMFMGDFSSVAKWSDEGVKG------CRKYLERVYNLL 637

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +++   +             + +  + ++ ++++ E+ +N   + A+AQ+++L +E   
Sbjct: 638 DLVVDGDEYS-----------KELEILTNQTIKKVGEDYENLKFNTAIAQLMTLSNE--- 683

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENR 484
                               +  +T +  +    LL    P L  +++++          
Sbjct: 684 -----------------MRALGKITKKDFKTYITLLNPVAPHLTEELWEMAGFDGRLSQT 726

Query: 485 CFQSLDQ 491
            + S D+
Sbjct: 727 SWPSFDK 733


>gi|219111249|ref|XP_002177376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411911|gb|EEC51839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1066

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 122/391 (31%), Gaps = 83/391 (21%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV----ISFVKSGLKDLSLSRKT- 213
             E+E  +F             +      +P     +          +      ++R   
Sbjct: 491 PEEQEKTWFHWLDNIKDWCVSRQLWWGHQIPAWFATKKGESLEKNDMANNDRWVVARSAE 550

Query: 214 -----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                         G    +  + ++  W  +     +  G+ D+    KA F+P  L  
Sbjct: 551 EALEKAAKLLGCPAGDISIERDEDVLDTWFSSGLFPFSVMGWPDDTSDLKA-FYPTSLLE 609

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIEV 316
            G DIL F    W A ++   L L   +  H   LH      +G+K+SKSLGNVIDP+EV
Sbjct: 610 TGLDILFF----WVARMVMMGLELTDTLPFHTVFLHAMVRDKEGKKMSKSLGNVIDPLEV 665

Query: 317 I-------------------------------------EEVGVDALRYFLVREIACGKDG 339
           I                                      E G DALR+ L+  +  G+D 
Sbjct: 666 INGCSLASLQERLEGGNLPAKEVERSKKNNELEFPDGIPECGSDALRFGLMAYMVQGRDI 725

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---------DESI 390
             D   +             N +  +    L+      PTP    +          D+ +
Sbjct: 726 NLDVKRVVG------FRLFCNKLWNATRFALQFVADFTPTPTLLDDLMASGKMATRDKFM 779

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT--NPDRAST 446
           +S   + ++ + +   +     A     +L      + Y +  KP     +  N D    
Sbjct: 780 ISRLMKAVEAVNDFFSSYRFGDAQQAAYALWIEDLCNTYLELIKPVVYDMSVNNIDNRWA 839

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   +     LL   +P ++ +++  L
Sbjct: 840 AQATLWIAMETGLRLLHPMMPFVSEELWQRL 870



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 23/160 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           H+GHA    + D L R+HR+ G   L+  GTD  G       + 
Sbjct: 118 EKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHATLYVPGTDHAGIATQSVVEK 177

Query: 65  AGVTT----------KVFVDQNSRNFRD-----------MADVLDISYDDFIRTTEKRHH 103
             + +          + FV +     +D           +   +D S + F  T ++   
Sbjct: 178 MLMKSEGKSRHDLGREEFVKKVWEWKKDYGSKITNQLRSLGSSVDWSRERF--TMDEMLS 235

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + +  +KG +Y+    G +S   ++  +D EV  
Sbjct: 236 KAVVEAFNRFHEKGLLYRADRLGNWSCALKSAISDIEVDF 275


>gi|283835086|ref|ZP_06354827.1| isoleucine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291069380|gb|EFE07489.1| isoleucine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 938

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRAIELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDPKDILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       +EI +  +    H  + +++   S      Y
Sbjct: 668 GFDPVKDMVKPEEMVVLDRWAVGCAQAAQEEILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFHAADRDAVKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSDVNGPISLVIWTTTPWTLPANR 251


>gi|239917504|ref|YP_002957062.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414006|ref|ZP_06245748.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838711|gb|ACS30508.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 894

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 122/355 (34%), Gaps = 16/355 (4%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE----SHPEF 186
           R E      E+    +   +  + N V+ +  +    R   +   +  +Y       P++
Sbjct: 430 RAELIERGREISWHPEHMRHRYE-NWVEGLNGDWLVSRQRFFGVPIPVWYPLDAEGEPDY 488

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             PI   +E +    +       +    D       DP  ++  W  +         +  
Sbjct: 489 ENPILPADEQLPVDPAAEAAPGYAEDQRDVPGGFTGDPD-VLDTWATSSLTPQIVGRWSR 547

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +        +P DL   G DI+     +    A  L+ ++P      S   +    +K+S
Sbjct: 548 DEAF-FHNVFPFDLRPQGHDIIRTWLFSTVVRAHALNGSVPWTDTALSGWILDPDRKKMS 606

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++++ G DA+RY+       G D  Y  +  + ++   LA  + N    
Sbjct: 607 KSKGNVVVPTDILDQFGSDAVRYW-AASARLGADTAY--EVAQMKIGRRLAIKLLNAAKF 663

Query: 365 SVSMILKDYDGMIPTPGAF---TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +++       +     A       D S+L+  +  +++     +     RAL       
Sbjct: 664 VLNLGATQDAVIRTADDAAAVTNPLDASLLARLAATVEQATRAFEAYDYARALNVTEQFF 723

Query: 422 SE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               D Y +  K            ++V+      +  L  LL  F P    +++ 
Sbjct: 724 WAFTDDYVELVKDRAYGGHGEAEQASVVTTLATTLDALLRLLAPFQPFATEEVWS 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 11/129 (8%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DVLAR+ R++G +V +  G D++G    +
Sbjct: 56  TTREQVYSIDTPPPTASGSLHVGHVFSYTQTDVLARYQRMNGKNVFYPMGWDDNGLPTER 115

Query: 61  AAQN----AGVTTKVFVDQNS---RNFRDMADVLDISYDDFIRTTEK---RHHDTCRILW 110
             QN         K +V+      +  ++  D   IS  +FI   E+           L+
Sbjct: 116 RVQNYYGVRCDPAKPYVEGYRPPEKPAKNQRDWDVISRRNFIELCEELAVEDEKVFEDLF 175

Query: 111 KKISDKGDI 119
            ++    D 
Sbjct: 176 TRLGLSVDW 184


>gi|19112227|ref|NP_595435.1| cytoplasmic valine-tRNA ligase Vrs2 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|12230647|sp|O75005|SYV_SCHPO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3738176|emb|CAA21312.1| cytoplasmic valine-tRNA ligase Vrs2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 980

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 132/400 (33%), Gaps = 51/400 (12%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQWME-EEGYFFRLSAYQDKLLSYYE 181
             W+  + E      EV K  + +          ++WME  + +      +    +  Y 
Sbjct: 470 PQWWVNQKEMAAAAAEVVKSGEIEIAPDMSRREFIRWMENIQDWCISRQLWWGHRIPAYF 529

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDALTNYL 239
            +       +R           L+      K    G    +  D   ++  W  +     
Sbjct: 530 VNLADEPSQDRSEGRYWVTGRTLEQAEEKAKAAFPGKSFTLEQDED-VLDTWFSSGLWPF 588

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
           +T G+  +       F+P  L   G DIL F    +      L+  +P  K+VF H  + 
Sbjct: 589 STLGWPKDTS-DYENFYPTTLMETGWDILFFWIARMVMLGLKLTGKIPF-KRVFCHALVR 646

Query: 298 H-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG----------------- 339
             +G K+SKSLGNV+DPI+VIE + + AL   L+      ++                  
Sbjct: 647 DAQGRKMSKSLGNVVDPIDVIEGISLQALHDKLLVGNLDSREVEKAKKGQRLSYPKGIPQ 706

Query: 340 ------------------FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPT 379
                               + D L+        N + N    ++  +  ++  +     
Sbjct: 707 CGTDALRFTLCSLTTGGRDLNLDILRVEGYRKFCNKLYNATKFALGRLGSNFVPNKTADL 766

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK 437
            G  +  ++ I    +     + +NM+     +A + V         D Y +  K + L 
Sbjct: 767 TGNESLVEKWIFHRLNIAAAAMNKNMEEMNFLQATSAVHQFWLYELCDVYIENSK-YLLS 825

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +  +       V+     L+  F+P +  +++  L
Sbjct: 826 DGTEVQQESAKQTLYTVLDNALRLMHPFMPYVTEEMWQRL 865



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I++         HIGHA  + I D LAR++R+ G  VLF  G D  G       +   
Sbjct: 132 FVITSPPPNVTGALHIGHALTIAIQDSLARWNRMLGKTVLFLGGFDHAGLSTQSVVEKKL 191

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
             T+                  + ++     ++    L  S+D      T ++       
Sbjct: 192 WYTQKKTRHDYPRDKFVDIVWEWKEEYHNRIKNQMSRLGGSFDWTREAFTMDENLSRAVV 251

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++  IY+      +    +   ++ EV
Sbjct: 252 ETFVRLHEENIIYRANRLVNWCTALQTTLSNLEV 285


>gi|284991674|ref|YP_003410228.1| isoleucyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064919|gb|ADB75857.1| isoleucyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 1051

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/415 (14%), Positives = 124/415 (29%), Gaps = 64/415 (15%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
             E        +    H P+ +  +  ++ R SA +D+LL+   +      P   +    
Sbjct: 389 WREQRYEHSYPHCWRCHTPLMYYAQPSWYIRTSAVKDQLLAE--NEKTHWHPEHIQWGRY 446

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPD-----DPQ--------------------------- 225
                   D +LSR    WG  +P      DP                            
Sbjct: 447 GDWLRNNVDWALSRDR-YWGTPLPVWRNDADPGRMVVVGSLAELSELTGRDLSDLDPHRP 505

Query: 226 --------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
                                ++  W D+        G            +PA       
Sbjct: 506 FIDEVTFTLPGEEGTYRRVPQVIDAWYDSGAMPFAQWGAPYRNQAEFRAAYPAQFICEAI 565

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F+++     L+         +     +   G K+SK LGN+++PI +++  G D
Sbjct: 566 DQTRGWFYSLMAVGTLVFEQNSYENVLCLGHILAEDGRKMSKHLGNILEPIPLMDRHGAD 625

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI---PTP 380
           A+R+F++   +         + L + V   L          ++      +D      P P
Sbjct: 626 AVRWFMLAGGSPWSARRVGHETLSEVVRKVLLTYWNTASFFTLYAETNGWDPTSSPAPAP 685

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
                 D   L+  + V + +   +++     A   +   V ++  ++  +        +
Sbjct: 686 AERPLLDRWALATLAEVTEGVTAALEDFDTQGAGRLIAQFVDDLSNWYVRRSRRRFWDGD 745

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           P   +T      EV+  L  L+  F P +  +++             S+     P
Sbjct: 746 PAALAT----LHEVLDVLTRLMAPFTPFVTEEVWARAVAPGRTDAVDSVHLASWP 796



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 23/165 (13%)

Query: 3   EREKLYISTAIAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            R +  +       N +P  H  H       DV  RF  + G  V    G D HG  +  
Sbjct: 42  GRPQWNVYEGPPTANGRPGTH--HIEARAFKDVFPRFKTMQGWHVPRRAGWDCHGLPVEI 99

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
           A +                       +  V+++  +F D+   +     +     T + R
Sbjct: 100 AVEQELGFAGKPDIERYGIAEFNARCRESVERHVADFSDLTRRMGFWVDFSTAYWTMDPR 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + ++     K++ DKG + +      Y  R     +D EV +G +
Sbjct: 160 YIESVWWSLKQVFDKGLLVEDHRVAPYCPRCGTGLSDHEVAQGYE 204


>gi|302794101|ref|XP_002978815.1| hypothetical protein SELMODRAFT_443981 [Selaginella moellendorffii]
 gi|300153624|gb|EFJ20262.1| hypothetical protein SELMODRAFT_443981 [Selaginella moellendorffii]
          Length = 1031

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 71/457 (15%), Positives = 142/457 (31%), Gaps = 58/457 (12%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                 R  +          +        ++ + Y +  E+   A     N +   V   
Sbjct: 353 ERKKLFRGKFPHKMPLAICSRSNDVLEPMMKPQWYVDCKEMAVRACEALRNNELQIVPSS 412

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS---------- 210
             + ++             +  H           +            +++          
Sbjct: 413 FADIWWLENIEDWCVSRQLWWGHRIPAWYAVLDADEDQTFGIYDDHWAVADSEQAADAEI 472

Query: 211 -RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
            ++      K+  DP  ++  W  +     ++ G+ D+     A F+P  +   G DIL 
Sbjct: 473 KQRFPGATFKLQHDPD-VLDTWFSSGLFPFSSLGWPDSTA-DYAAFYPTTVLETGHDILF 530

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +      L+  LP    +           K+SKSLGNVIDP++VI  + +D L  
Sbjct: 531 FWVARMVMLGTQLTGQLPFKTVLLHGMVRDAHKRKMSKSLGNVIDPLDVISGISLDGLVA 590

Query: 328 FLVREIACGKDGFYDKDGL------------------------KKRVNADL-------AN 356
            L        +     +GL                         +  N +L         
Sbjct: 591 KLALLNLQPSELKQATEGLHKDFPRGIPECGVDALRFGLIAYTAQAENMNLNIQRFLGYR 650

Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQLIH 411
              N +  +V     ++ DG  P       +   S + ILS  + ++ +I ++     + 
Sbjct: 651 QWCNKLWNAVRFARLNFHDGFEPEEDLDISSLPWSCKWILSSLNDIVCKINKSFARYDLS 710

Query: 412 RALAQVISLV--SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A + V S    S  D + +  KP    +    D  +         +     +L  F+P 
Sbjct: 711 GASSAVYSWWQYSLCDVFIELVKPLLSSEELGEDGKAATRSTLYICLDSGLRMLHPFMPF 770

Query: 469 LANKIFDILFVADENRCFQSLDQRL----KPGFMLHK 501
           +  +++  L   +++    S+        KPG+  H+
Sbjct: 771 ITEELWQRLPHKNKSEERSSIMTASYPTEKPGWSNHE 807



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 46/164 (28%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               K  +           H+GHA  + + D L R  R+ G   L+  G D  G      
Sbjct: 41  STEPKFVMVLPPPNVTGHLHLGHALTVSVQDALVRHSRMSGRVTLWLPGVDHAGIATQVV 100

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +    +T+                  +  +           +  S D      T + + 
Sbjct: 101 VEKKLASTQNLTRHDLGRDAFVKKVWEWKTEYGGAICSQLRTMGASLDWSRECFTMDLQR 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                  + ++   G IY+      +    +   +D EV    D
Sbjct: 161 SRAVTEAFVRLYKAGLIYRANRIVKWDCFLKTAISDIEVEHTGD 204


>gi|189346135|ref|YP_001942664.1| leucyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|229559914|sp|B3EH05|SYL_CHLL2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189340282|gb|ACD89685.1| leucyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 805

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 9/203 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y+     YP+    H+GH      +D++ARF R  G +VL   G D  G    +
Sbjct: 28  TEKPKYYVLDMFPYPSGSGLHVGHLEGYTASDIIARFKRSRGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K+  + N R+FR+    +  SYD    I TT+  +    + ++ ++ + G 
Sbjct: 88  YAIKTGTHPKITTENNIRSFRETLQAMGFSYDWSKEINTTDPAYFKWTQWIFLRLYEMGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +    +    ++EV +     Y       V       +  +++AY ++LL+
Sbjct: 148 AYMSDVDVNWCEELKTVLANEEVDEKIADGYT------VVRKPLRQWVLKITAYAERLLA 201

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 202 DLDELEWPENVKQMQRNWIGRSE 224



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 103/265 (38%), Gaps = 42/265 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D  + K+W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPENSGRLIDPEREKYWMNVDLYIGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  K       +    EK+SKS GNVI    V++  G DA+R + + 
Sbjct: 546 KVLFDLNVVSTVEPFRKLFNQGMILGEDNEKMSKSRGNVIPADHVLKTYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++ +G++         GI   + +   ++  + +G        T   E +L
Sbjct: 606 LGPLEQVKPWNTNGIE---------GISRFLGKVWRLVYPEQEGNKAELTDETMP-EELL 655

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ +    + A+A+++ LV+E+ R             N  R  T     
Sbjct: 656 RRLHKTIRKVTEDTEALKFNTAIAEMMVLVNELQR-------------NGCRNRTA---- 698

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
              +  + +LL  + P +A +++  
Sbjct: 699 ---VESMILLLAPYAPHIAEELWQA 720


>gi|187924775|ref|YP_001896417.1| valyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187715969|gb|ACD17193.1| valyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 959

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/397 (16%), Positives = 128/397 (32%), Gaps = 90/397 (22%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            EG F    +  +  L    S     +P         +++  ++D  +SR+   WG +IP
Sbjct: 378 PEGTFNPGKSIAETALDVVRSGEIKFVPENWTTTYYQWLE-NIQDWCISRQ-LWWGHQIP 435

Query: 222 -------------------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
                                             + ++  W  +     ++ G+ +    
Sbjct: 436 AWYGENGEIFVAKTEEDARAKAAAAGYTGALRRDEDVLDTWFSSALVPFSSLGWPNETQE 495

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
            K  F P+ + V G DI+ F    +       +  +P             +G+K+SKS G
Sbjct: 496 LK-HFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFDTVYVHGLVRDAEGQKMSKSKG 554

Query: 309 NVIDPIEV-------------------------------------IEEVGVDALRYFLVR 331
           N +DPI++                                     I   G DALR+ +  
Sbjct: 555 NTLDPIDIVDGIGLDALVAKRTTGLMNPKQAASIEKKTRKEFPDGIPAFGTDALRFTMAS 614

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--------- 382
               G++  +D    +     +  N + N  +R V M  + +D     P           
Sbjct: 615 MATLGRNVNFDLARCEG--YRNFCNKLWN-ATRFVLMNCEGHDCGFGKPEQCGECGPDGH 671

Query: 383 --FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
             F+++D  I+S   RV  EI +   +         +   V +   D Y +  K  +++ 
Sbjct: 672 LHFSQADFWIVSRLQRVEAEIAKGFADYRFDNVANALYKFVWDEYCDWYLELAKV-QIQT 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             P++        + V+  +  L    +P +   ++ 
Sbjct: 731 GQPNQQRATRRTLLRVLETVLRLAHPVIPFITEALWQ 767



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 18/147 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   I           H+GHA+   I D LAR+HR+ G + L+  GTD  G      
Sbjct: 41  ENRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRMLGENTLWVPGTDHAGIATQIV 100

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
            +                        +  ++     +    L   I +     T + +  
Sbjct: 101 VERQLDAQGVSRHDLGREKFVERVWEWKQESGSTITNQVRRLGASIDWSREYFTMDDKMS 160

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSL 130
              R ++ ++ ++G IY+G     +  
Sbjct: 161 AAVRDVFVRLYEQGLIYRGKRLVNWDP 187


>gi|326519638|dbj|BAK00192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1046

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 74/420 (17%), Positives = 143/420 (34%), Gaps = 89/420 (21%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +  ++ V+ M +  +F   +      L+  +S    I+P +   +   +++  ++D  
Sbjct: 443 RCSRTNDIVEPMIKPQWFVNCNTMAKSALNAVKSKEIEIIPPQYEQDWYRWLE-NIRDWC 501

Query: 209 LSRKTFD------WGIKIPDDPQY------------------------------------ 226
           +SR+ +       W + + DD +                                     
Sbjct: 502 ISRQLWWGHRVPAWYVTLEDDKEKDMGSYIDHWIIARNKSDAVLEAKQRYPEKKYQLDQD 561

Query: 227 --IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  A    LT  G+ DN     + F+P  +   G DIL F    +     LL  
Sbjct: 562 PDVLDTWFSAGLFPLTILGWPDNTT-DLSTFYPTSVLETGLDILFFWVARMVMMGMLLHG 620

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++P  K           G K+SKSLGNVIDPI+VI  + ++ L+  L +      +    
Sbjct: 621 DVPFQKIYLHPIIRDAHGRKMSKSLGNVIDPIDVINGITLEGLQKKLEQGNLDQGELEKA 680

Query: 343 KDGLKK--------------------------RVNADL-----ANGIGNLVSRSVSMILK 371
           K+G KK                          ++N D+          N +  ++   + 
Sbjct: 681 KEGQKKDFPDGIPECGTDALRFALISYTSQFDKINLDIKRVHGYRQWCNKLWNAIRFAMI 740

Query: 372 DYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--- 423
                   P            + ILSV S+ + +   +++      A + +     +   
Sbjct: 741 KLGDQYTPPATLAVHTMPSICKWILSVLSKAVGKTVSSLEAYKFSDATSSIY-FWWQYQL 799

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFDILFVADE 482
            D + +A KP+       + A      T+   +     LL  F+P +  +++  L    E
Sbjct: 800 CDVFIEAIKPYFNGSQEFESARGASRDTLWACLDTGLRLLHPFMPYITEELWQRLPQPKE 859



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 113 SSKPPFVIVLPPPNVTGALHIGHAITVAIEDAMIRWRRMSGYNALWIPGMDHAGIATQVV 172

Query: 62  AQNAGVTTKV-----------------FVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + DQ           L  S D      T +++ 
Sbjct: 173 VEKKIMRERKLSRHDLGRDKFLSEVHNWKDQYGGTISRQLRTLGASLDWSRECFTMDEQR 232

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
            +     + ++  +G IY+      +  
Sbjct: 233 SEAVTEAFVRLYKEGLIYRDIRLVNWDC 260


>gi|327441141|dbj|BAK17506.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 103/276 (37%), Gaps = 16/276 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PADL++ G D     F++    + 
Sbjct: 517 FTKENDIMDVWFDSGSSHQGVLV-------ERGLKYPADLYLEGSDQHRGWFNSSLITSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  +G K+SKSLGN IDPI+V+ + G D +R ++   +    D
Sbjct: 570 AINGHAPYKGLLTHGFVLDGEGRKMSKSLGNTIDPIKVMNQYGADIIRMWVA-SVDYTGD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM-IPTPGAFTESDESILSVCSRV 397
                D LK+   ++    + N +      +    +           E D+ +      V
Sbjct: 629 VRISMDMLKQV--SETYRKVRNTLRFLHGNVTDFNETTDRVAYEELREMDQYMYMRLQDV 686

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK-TNPDRASTVLYVTVEV 454
           ++ IRE             V + V+      Y D  K     + T+      +  V  + 
Sbjct: 687 VKTIREAYDRYDFSTVYTTVNNFVAIELSSFYLDIAKDVVYIEGTDNKDRRAMQTVMYDT 746

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           +  L  LL   +P    +++  +    + +  Q  D
Sbjct: 747 LMALVKLLTPIIPHTTEELWSYIEFDGKPQSVQLTD 782



 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   HIGHA   +I D++ R   + G  V +  G D HG  I +A
Sbjct: 46  KDRPHYLLHDGPPYANGDIHIGHALNKVIKDMINRQKSMSGFHVPYIPGWDTHGLPIEQA 105

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
             N GV  K             +  +   N +     L +  D  +   T +        
Sbjct: 106 LTNKGVKRKEMSVAEFRELCEKYAYEQIENQKSQFRRLGVRGDWANPYITLKPEFEARQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 166 EVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|227543882|ref|ZP_03973931.1| leucine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909628|ref|ZP_07127089.1| leucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186143|gb|EEI66214.1| leucine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300893493|gb|EFK86852.1| leucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 806

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  + TT+ + +   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKFYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV       +  +++AY D+L
Sbjct: 148 AYESEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 105/263 (39%), Gaps = 45/263 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFL------- 279
            A +++        + D   A      +W P DL+V G +    H +Y   +        
Sbjct: 495 WAGSSWYWLRYTDPHNDKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLG 554

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      + 
Sbjct: 555 LVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDQYGADTLRLYEMFMGPLEES 614

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D+ GL         +G    V R   +++ D + +      F   D  +  V ++ +
Sbjct: 615 VPWDEKGL---------HGANKWVQRVWRLLMDDNNHLRDRVSTFN--DGKLTKVYNQTV 663

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E+ +    + A++Q++  V+E  +                    V  + VE ++  
Sbjct: 664 KKVTEDYERMHFNTAISQLMVFVNEAYK--------------------VDDLPVEYMKGF 703

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++   +P +A +++     +D
Sbjct: 704 VKMIAPIMPHMAEELWSQFGESD 726


>gi|319902175|ref|YP_004161903.1| Isoleucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417206|gb|ADV44317.1| Isoleucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 1163

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 106/301 (35%), Gaps = 13/301 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             P     E    +      +         G  +  +   ++ VW D+ +       Y  
Sbjct: 592 FQPGAYTQENYDKIDLHRPYVDDIILVSKDGKPMRRETD-LIDVWFDSGSMPYAQIHYPF 650

Query: 247 NPDGSKAKF--WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                      +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENRELLDTHQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK LGN +DP   IE+ G D LR++++   +   +  +D DG+++              
Sbjct: 711 MSKRLGNAVDPFSTIEKYGSDPLRWYMITNSSPWDNLKFDVDGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S+   +  ++            E D  ILSV + +++ +          +A   +   
Sbjct: 771 FFSLYANVDGFEYKEADMPMEERPEIDRWILSVLNTLVKGVDTCYNEYEPTKAGRLISDF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W    T  D+ S         +  +A L+    P  A+ ++  
Sbjct: 831 VNDNLSNWYVRLNRKRFWGGGMT-QDKLSA-FQTLYTCLETVAKLMAPIAPFYADMLYSD 888

Query: 477 L 477
           L
Sbjct: 889 L 889



 Score = 54.0 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTEREGCPSFVFYEGPPSANGMPGIHHVMARSIKDIFCRYKTMKGFQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLD------------ISYDDFIRTT 98
           +    + A   TK  + +       N+   +D+                 +   +   T 
Sbjct: 94  VELGVEKALGITKEDIGKTISVAEYNAACRKDVMKFTKEWEDLTHKMGYWVDMKNPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVG 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKSPKPEMAEWGTPYFIAWTTTPW 239


>gi|148239596|ref|YP_001224983.1| leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|189083176|sp|A5GL71|SYL_SYNPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147848135|emb|CAK23686.1| Leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 878

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 73/199 (36%), Gaps = 5/199 (2%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
            Y  +   YP+   H+GH    +I DV+AR  R+ G  VL   G D  G     AA    
Sbjct: 51  FYALSMFPYPSGSLHMGHVRNYVITDVIARAQRMRGDSVLHPMGWDAFGLPAENAAIERQ 110

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCY 124
           V   V+ D+N    +     L +S D      T    ++   + L+ ++ D+G  Y+   
Sbjct: 111 VDPGVWTDRNIEQMKAQLARLGLSIDWSREQATCHADYYRWTQWLFLELMDQGLAYQKDA 170

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +  +   D+    +++V               V+      +F R++ Y D LL   +   
Sbjct: 171 TVNWDPVDQTVLANEQVDSE---GRSWRSGALVEQKNLRQWFLRITNYADALLDDLDLLK 227

Query: 185 EFILPIERRNEVISFVKSG 203
            +   +            G
Sbjct: 228 GWPERVRTMQANWIGRSIG 246



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 19/198 (9%)

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
           PK     G +    EK+SKS  N +DP  VI+  G D  R F++ +    KD  +D   +
Sbjct: 617 PKDPVDGGELEVLFEKMSKSKYNGVDPAAVIDRYGADTARMFILFKAPPEKDLEWDDADV 676

Query: 347 KK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
           +   R    L   I ++ S     +L D     P     ++ +  I       ++ + ++
Sbjct: 677 EGQFRFLQRLWRLIESVRSDDQDQLLGD-PVDPPEGSGLSDKEGEIRRAVHTAIEAVSDD 735

Query: 405 MQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++ +   + A+++++ L +             L    P+ +  V     E +  L  LL 
Sbjct: 736 LKGDFQFNTAISELMKLSN------------TLSGALPEASRAVQ---AEAVSALIRLLA 780

Query: 464 AFVPKLANKIFDILFVAD 481
            F P LA + +  L   D
Sbjct: 781 PFAPHLAEEFWFSLGGQD 798


>gi|294155780|ref|YP_003560164.1| valine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600430|gb|ADE19926.1| valine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 830

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 140/353 (39%), Gaps = 45/353 (12%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
           Y    + P++ +    +F ++  +   +L +  +  +      R  +++    S + D +
Sbjct: 342 YSERSNTPIEILVLPQWFVKMETFAKDILQHLRTKDKVKFYPPRFIKILKNWMSNIHDWT 401

Query: 209 LSRKTFDWGIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
           +SR+   WG +I                       + ++  W  +  +     G+    +
Sbjct: 402 ISRQ-IWWGHRIPVWYKGDQIKVQTTSPGLDWKQDEDVLDTWFSSGLSPFVFLGWPQKNE 460

Query: 250 GSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
             K +++P  L V G D++ F    +Y     +    P    +        +G K+SKSL
Sbjct: 461 MIK-RYYPTSLLVTGSDLIFFWIARMYMFGLDVMKQKPFENVLIHGLIRDEQGRKMSKSL 519

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
            N IDPI+VI+E G DAL++FL+     G D  Y  D +K       A G+ N +     
Sbjct: 520 NNGIDPIDVIDEYGADALKWFLITNTTPGFDIKYSPDKIKS------AWGLCNKLWNISR 573

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
            I    +         T++D+ I +  S +++ I ++M+N       +Q+   +      
Sbjct: 574 FIN---ELPNDNNNKITDADKWINNKLSLLIKSINKSMKNYEFTLVGSQISKFIYNDLSG 630

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            Y +        K NP +        + +++   I++  F+  +  KIF  +F
Sbjct: 631 WYVE------FLKVNPSKKQA-----LLILKNTLIVVNPFLSFVTYKIFKDIF 672



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 19/149 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   I         + H+GHA++ +I D + R+ +L G D  + +G D  G      
Sbjct: 30  TSKKPFSILLPPPNVTGKLHLGHAFDTLIPDTIIRYKKLKGFDTFWISGMDHAGIATQSK 89

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +     TK                  + +  +  FR+    L   + Y+    T +   
Sbjct: 90  IEEHLWNTKKLTKHDIGREEFLKLTWQWKEDYANLFREQWSRLGLALDYERERFTMDNDA 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +    ++  + +KG IYK   +  +  +
Sbjct: 150 SEAVVKVFVDLYNKGYIYKDVKAVNWDTK 178


>gi|50554981|ref|XP_504899.1| YALI0F02299p [Yarrowia lipolytica]
 gi|49650769|emb|CAG77701.1| YALI0F02299p [Yarrowia lipolytica]
          Length = 818

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 5/201 (2%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
            I YP+   H+GH     I+DVLAR+ R+ G D +   G D  G     AA    +    
Sbjct: 1   MIPYPSGVLHMGHLRVYTISDVLARYRRMAGYDTVHAMGWDSFGLPAENAAIERQIHPAE 60

Query: 72  FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   N    +   D +   +D      +    ++   + L+  + + G  Y+      + 
Sbjct: 61  WTVSNMAKMKSQMDEMLAEFDWEREFSSCFPDYYKWTQKLFLMMYEHGKAYQALSPVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D+    +++V               V+      +F +++ Y D LL   +   ++   
Sbjct: 121 PVDQTVLANEQVDSE---GRSWRSGAIVEKKMLRQWFLKITDYSDALLDDLKLLDQWPAK 177

Query: 190 IERRNEVISFVKSGLKDLSLS 210
           ++   E       G   +  S
Sbjct: 178 VKTMQEHWLGRSEGATVVFDS 198



 Score = 60.2 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 73/179 (40%), Gaps = 22/179 (12%)

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
            EK+SKS  N  DP   I++ G DA+R  ++ + A      +D+  +           + 
Sbjct: 573 WEKMSKSKYNGADPSTCIQQHGADAVRAHVLFQAAVNDVLDWDEGKIVGIK-----RWLL 627

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQLIHRALAQVI 418
            + S + S++  +         +F+++D ++ +     ++   ++  ++  ++  ++  +
Sbjct: 628 KVKSITESVVKLNPSSKGLDKSSFSDADRTLWNETQHYVKSASDSFHESLQLNTVISDYM 687

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            L +             L+K +         V +  +  L  ++    P +A + ++++
Sbjct: 688 KLTN------------TLQKES----GASPEVQLYALETLLKIMSPVAPAMAEECWELI 730


>gi|21672629|ref|NP_660696.1| valyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009418|sp|Q8K9I1|SYV_BUCAP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21623262|gb|AAM67907.1| valyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 960

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 134/401 (33%), Gaps = 85/401 (21%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           +Q M    ++ + S      +          +P + ++  +S++   ++D  +SR+   W
Sbjct: 373 IQPMLTNQWYLKTSHLSQSAIDVVREKKIKFIPNQYKSMYLSWMN-NIEDWCISRQ-LWW 430

Query: 217 G--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGYLD 246
           G  I +  D +  +YV                            W  +     +T G+ +
Sbjct: 431 GHQIPVWYDDKKNIYVGHSEKKIREEYNISDDMILNQDNDVLDTWFSSGLWTFSTLGWPE 490

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILH 298
             +  K      D+ V G DI+ F         +           +P      +      
Sbjct: 491 KTEFLKIFH-STDVLVSGFDIIFFWIARMIMLTMYLVKDSYGNPQIPFKDVYITGLIRDE 549

Query: 299 KGEKISKSLGNVIDPIEVIEEV-------------------------------------G 321
           +G+K+SKS GNVIDPI++I+ +                                     G
Sbjct: 550 EGKKMSKSKGNVIDPIDMIDGISLNELIEKRTSNLLQPHLSQKIRYHTIKQFPNGISATG 609

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            DALR+      +  +D  +D + LK     +  N + N  SR V    KD+D    +  
Sbjct: 610 TDALRFTFSALASNTRDIQWDMNRLKG--YRNFCNKLWN-ASRFVLKNTKDHDYFNFSVN 666

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
                 ++ IL   +  ++  R ++ +     A   +   +     D Y +  K   +K 
Sbjct: 667 DNMLLINKWILIKFNNTVKSYRNSLDSYRFDIAANILYDFIWNVFCDWYLEFVKS-VIKS 725

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            +         V + V+  L  L    +P +   I+  + +
Sbjct: 726 GSYQDIYFTKNVLIHVLELLLRLSHPIMPFITEAIWQRVKI 766



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA++  I D+L R++R+ G + L+  GTD  G       
Sbjct: 31  NKPAFCIMMPPPNITGNLHMGHAFQQTIMDILIRYNRMQGKNTLWQVGTDHAGIATQILI 90

Query: 63  QNAGVTTKVFVDQ------------------NSRNFRDMADVLD-ISYDDFIRTTEKRHH 103
           +    + +    +                  N    + M  + + + +D    T +    
Sbjct: 91  ERQIFSEERKTKKDYSRNDFIKKIWKWKKKSNFSVKKQMKRLGNSVDWDREKFTLDPDIS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++ +  +  +     IY+      +  + E   +D EV   
Sbjct: 151 NSVKEAFIILYKNNLIYQKKRLVHWDSKLETVISDLEVEHR 191


>gi|308177627|ref|YP_003917033.1| valine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307745090|emb|CBT76062.1| valine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 872

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 8/252 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W  +         +  + +   +K +P DL   G DI+R         A  L  N 
Sbjct: 516 VLDTWATSSLTPQIAGRWGRDDEF-FSKVYPFDLRPQGHDIIRTWLFSTAVRADSLHDNA 574

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P EV+++ G DA+RY+       G D  Y  +
Sbjct: 575 PWKHAAISGWILDPDRKKMSKSKGNVVVPNEVLDKFGADAVRYW-AASAKLGADTAY--E 631

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRE 403
             + ++   LA  I N     +++   D + +       T   D S+L+  S V+++ + 
Sbjct: 632 INQMKIGRRLAIKILNASKFVLNLGATDANILTDDASVVTNGLDRSLLARLSTVIEDAKR 691

Query: 404 NMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
              N    RAL    S      D Y +  K            ++VL      +  +  L 
Sbjct: 692 AFDNYDYARALDITESFFWSFTDDYVELVKDRAYGGHGEAEQASVLATLATTLDSVLRLF 751

Query: 463 QAFVPKLANKIF 474
             F+P    +++
Sbjct: 752 APFLPFATEEVW 763



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 8/132 (6%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE +Y I T     +   H+GH +     DVLAR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREAVYSIDTPPPTASGSLHVGHMFSYTQTDVLARYQRMIGKNVFYPLGWDDNGLPTER 104

Query: 61  AAQN----AGVTTKVFVDQNS---RNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
             QN        TK +++      +  ++  D   IS  +FI   E+   +  ++  +  
Sbjct: 105 RVQNYFGVRCDPTKPYIEGYRPPEKPAKNQRDWDVISRKNFIEVCEELAVEDEKVFEQLF 164

Query: 114 SDKGDIYKGCYS 125
           +  G       +
Sbjct: 165 TTLGLSVDWRMT 176


>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFNPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|326436748|gb|EGD82318.1| valyl-tRNA synthetase 2 [Salpingoeca sp. ATCC 50818]
          Length = 996

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 131/383 (34%), Gaps = 53/383 (13%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +    +  +++   +P  W      ++    ++        +           N+     
Sbjct: 503 IPANQEKTWFHWLESPRDWCISRQLWW---GHRIPAYFVSVNDDAVPKGTSDDNKYWVSG 559

Query: 201 KSGLKDLSLSRKTF---DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
               +  + + K F      I +  D   ++  W  +    ++  G+ DN      KF+P
Sbjct: 560 HDEDEARAKAAKRFGVDPSKITLTQDED-VLDTWFSSGIFPISIFGWPDNTP-DLQKFYP 617

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            DL   G DIL F    +      L+  LP             +G K+SKS GNVIDP +
Sbjct: 618 GDLLETGYDILFFWVARMVMMCTYLTGKLPFKDVYLHPIIRDKEGVKMSKSRGNVIDPTD 677

Query: 316 VI-------------------------------------EEVGVDALRYFLVREIACGKD 338
           V                                      +E GVDALR+ L   +  G+D
Sbjct: 678 VCTGITLEGLHERLAQGNLDPREIERAKELQKRQFPQGIKECGVDALRFTLCALVTPGRD 737

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSR 396
              D + +         N + N V   +S +  D+         G  +E D  +LS  S 
Sbjct: 738 INLDVNRI--FGYRTFCNKVYNGVKLVMSKLGPDFKPAEYGKLLGDESELDLWMLSRLST 795

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++++ + ++   +  +   + +L      + Y +  KP         R +TV  V   V
Sbjct: 796 CIRDMNKQLEEYDLVGSTTSIYNLWLYEFCNFYLEVVKPVFQDDQYKHRRNTVQNVMYTV 855

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
                 LL  F+P L  +++  L
Sbjct: 856 AESGLRLLSIFMPFLCEELWQRL 878



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 48/160 (30%), Gaps = 23/160 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E++   +           H+GHA    I D L R++R  G   L+  G D  G       
Sbjct: 136 EKKSYTLVIPPPNVTGSLHMGHALTNSIEDTLTRWNRQCGKRTLWNPGCDHAGIATQSVV 195

Query: 63  QNAGVTTKVFVDQ---------------------NSRNFRDMADVLDISYDDFIRTTEKR 101
           +      K    Q                       +  + +    D  +D    T   R
Sbjct: 196 EKKLWREKQLRRQDLGREKFLDLVWQWKEEKGGFIYKQIKYLGASCD--WDREAFTMSDR 253

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                +  + ++ + G I +      +S    +  ++ EV
Sbjct: 254 CCRAVKEAFIRMHEDGIIMRKKKLINWSCHLNSAISEIEV 293


>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMSGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 913

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 500 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMAGFSAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 913

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 500 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 913

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 500 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|297588297|ref|ZP_06946940.1| leucine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573670|gb|EFH92391.1| leucine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 802

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +EK Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKEKFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  ++  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEIVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G            V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGH----CERCGGEVIRKVKNQWMLKITEYADRLID 204

Query: 179 YY 180
             
Sbjct: 205 DL 206



 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 66/444 (14%), Positives = 144/444 (32%), Gaps = 68/444 (15%)

Query: 53  EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKK 112
            +G     A          F  + +     + +  DI    F  T     +         
Sbjct: 332 TYGTGAIMAVPAHDDRDYEFAKKFNIEMIPVIEGSDIENSAFTETN--EGNLINSEFLNG 389

Query: 113 I---SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +     K  +Y+         +   Y   D V+       Y  +  P+ + E  G+    
Sbjct: 390 LSVDEAKEKMYEYIEEKEIGHKKTNYKLRDWVFSRQ---RYWGEPIPLVYCEHCGWV--- 443

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
              ++K L       +   P +     +S +   +                       M 
Sbjct: 444 -PLEEKDLPLVLPKVDNYEPTDNGESPLSNIDEFVHTKCPKCGR------DAVRETDTMP 496

Query: 230 VWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIGKDILRFHAIYWPAFL------ 279
            W  +   YL  T   ++       +   + P D +  G +    H +Y   +       
Sbjct: 497 QWAGSSWYYLRYTDPHNDEAIASKENLDYYVPVDWYNGGMEHTTLHLLYSRFWHKFLYDI 556

Query: 280 --LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             +    P  K+      +    EK+SKS GNV++P +++ + G D LR + +      K
Sbjct: 557 GVVPTKEPYMKRTSHGMILGDNNEKMSKSRGNVVNPDDIVRDFGADTLRCYEMFIGDFEK 616

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              + ++G+K            + V R+  ++  D +             E + ++  + 
Sbjct: 617 SAPWSENGVKG------CRKFLDKVWRTQELVDGDSNF------------EKMETLVHQT 658

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++++ E+ +N   + A+AQ+++L++E +          L K + ++            + 
Sbjct: 659 IKKVSEDYENLKFNTAIAQLMTLLNEFNN---------LDKISEEQ-----------FKI 698

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
             ILL    P +  +I+  +    
Sbjct: 699 FLILLNPVCPHITEEIWQRMGYEG 722


>gi|170290812|ref|YP_001737628.1| isoleucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174892|gb|ACB07945.1| isoleucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 982

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 75/402 (18%), Positives = 143/402 (35%), Gaps = 62/402 (15%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                      P+     + +F R+S  ++KLLS   S     +P             G+
Sbjct: 395 HKYPVCWRCDTPLIIRATKQWFIRISDIREKLLSE--SDKVKWVPRWGGERRFRDWLLGV 452

Query: 205 KDLSLSRKTFDWGIKIP-DDPQY------------------------------------- 226
           +D  +SR+   WGI IP                                           
Sbjct: 453 EDWIISRQR-YWGIPIPIWTCDKCGKIEVIGSSRELEAKSGVKLEDLHRPWVDEVSIKCD 511

Query: 227 -----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      IM VW D+  ++  + GY    D    + +P D    G D +   F ++
Sbjct: 512 SCGGTMRRIPDIMDVWYDSGISFFASLGYPYKTDSLN-EIFPVDFITEGHDQVRGWFFSL 570

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                LL    P    +     +  KG ++ K LGN + P E+++  G D  R F++ ++
Sbjct: 571 LRMGVLLFGRAPYRSVLMHGFMLDEKGREMHKRLGNYVPPQEIVKRFGRDCFRAFVLTKV 630

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
              +D  +   G+++       N I N+   + + I       +         ++ ++S 
Sbjct: 631 P-WQDLRFSWKGMEEVSRK--LNIIWNVYVFATTYIGDRDIKDLDPSDVRDPINKWLISR 687

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL-VSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            +  ++  RE M+   +H A  ++I+  V +V   +      +++  +   +S  + V  
Sbjct: 688 LNTTMKNFREAMEEYNLHVASNEIINFLVEDVSHLYLRVSRKKIRSKDEATSSEWISVLY 747

Query: 453 EVIRQLAILLQAFVPKLANKIFD---ILFVADENRCFQSLDQ 491
            V+R     L    P LA KI+    ++    E+  F +L +
Sbjct: 748 YVLRNAIPYLSVVTPFLAEKIYLDAFMMNGDPESVNFLTLPE 789



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 20/157 (12%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K +      YP++  PH G  +  ++ D + RF R +G  VL   G D HG  I    +
Sbjct: 41  KKFHFLDGPPYPSSDTPHPGTVWNKVVKDAVVRFKRGEGYFVLDKPGWDTHGLPIEVMTE 100

Query: 64  NA-----------------GVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHD 104
            A                     +    +N  +         +S D      T E+ + +
Sbjct: 101 RALGFSSKKDIETFGIAKFVEQCRELAARNIESMTRHFKEFGVSLDWSSPYVTYEREYIE 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +     K+I + G +Y+G     +  R E   +D EV
Sbjct: 161 SAWWGIKRIWENGMLYQGERPVHWCPRCETVLSDYEV 197


>gi|85057936|ref|YP_456852.1| leucyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84790041|gb|ABC65773.1| leucyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 821

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+++  H+GH      +D+++RF R+ G +VL   G D  G    + 
Sbjct: 32  SKKKFYCLDMFPYPSSEGLHVGHIEGYTASDIMSRFKRMQGFNVLHPFGWDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N  NF+     +   + +D  + T++   +   + ++KK+ +KG  
Sbjct: 92  ALQTGKNPRNFTYENINNFKKQIQSIGKSVDWDRELATSDPYFYAWTQWIFKKLYEKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         ++EV     G +    ++PV   + + +  +++ Y D+LL  
Sbjct: 152 VLKNIEVNFCPNLGTALANEEVISNEKGMFSERGNHPVVKKKMKQWVLKITQYADRLLDD 211

Query: 180 YESHPEFILPIERRNEVI 197
                  +   E +   I
Sbjct: 212 LNLVNWPLNVKEMQANWI 229



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 82/229 (35%), Gaps = 46/229 (20%)

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P DL++ G +    H +Y   +         +S   P  K V     + H   K+SKS G
Sbjct: 546 PVDLYIGGTEHAVGHLLYARFWHKFLYDLGLVSTKEPFQKLVNQGIILGHDHTKMSKSKG 605

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +    ++   G D LR +++          + + G K         GI   ++R   M
Sbjct: 606 NGVSASLMLARYGADVLRIYIMFMGPLEDIKNWCEKGFK---------GIQRFLNRVYQM 656

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
               +   +P     +     + ++  + + +  ++ +    ++ ++Q++  V++V ++ 
Sbjct: 657 ----FSFSMPNDFETS-----LNAIYHQTIFQTTQDYEKLKFNKVISQLMIFVNQVYKH- 706

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   +K    +A                LL    P L  +I   +
Sbjct: 707 --------QKIGKKQAQ-----------IFLQLLNPIAPHLTEEINQTI 736


>gi|325963645|ref|YP_004241551.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469732|gb|ADX73417.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 873

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 8/253 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+  W  +        G+  + D   AK +P D+   G DI+     +    A  L  + 
Sbjct: 518 ILDTWATSSLTPKIVGGWKRDED-LFAKVFPFDVRPQGHDIIRTWLFSSVVRADALENSA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P +V+EE G DA+RY+       G D  Y  +
Sbjct: 577 PWKHAAISGWILDPDRKKMSKSKGNVVVPTDVLEEYGSDAVRYW-AASAKLGADTAY--E 633

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-TESDESILSVCSRVLQEIRE 403
             + ++   LA  + N     +++   +   +           D ++L+  S V+ +   
Sbjct: 634 IAQMKIGRRLAIKLLNASKFVLNLGATENSVVSDDLAVLANPLDRAVLAQLSEVVAQSTR 693

Query: 404 NMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +N    RAL    S      D Y +  K            ++VL      +  L  L 
Sbjct: 694 AFENYDYARALQITESFFWQFTDDYVELIKDRAYGAAGEAEQASVLAALATTLDTLLRLF 753

Query: 463 QAFVPKLANKIFD 475
             F+P    +++ 
Sbjct: 754 APFLPFATEEVWS 766



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 53/167 (31%), Gaps = 39/167 (23%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             R+++Y I T     +   H+GH +     DVLAR+ R+ G +V +  G D++G    +
Sbjct: 47  TTRDQVYSIDTPPPTASGSLHVGHMFSYTQTDVLARYQRMTGKNVFYPMGWDDNGLPTER 106

Query: 61  AAQNA---GVTT---------------------------------KVFVDQNSRNFRDMA 84
             QN                                         +    ++ + F ++ 
Sbjct: 107 RVQNYYGVRCDPSIPYNPDYQPPAQPAKNQRDFDVVSRRNFIELCEELAVEDEKVFENLF 166

Query: 85  DVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
             L +S D     RT +       +  +      GD Y       + 
Sbjct: 167 QTLGLSVDWELTYRTIDDNSRAVSQRAFLANLAAGDAYMAEAPTLWD 213


>gi|325969890|ref|YP_004246081.1| leucyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324025128|gb|ADY11887.1| leucyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 842

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++ Y+     YP+    H+GH       D+  RF R+ G +VL   G D  G      
Sbjct: 37  KDKRAYVLDMFPYPSGAGLHVGHPEGYTATDIYCRFLRMRGYNVLHPMGFDSFGLPAENY 96

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N  NFR     L  SYD    I T    ++   + ++ ++ +KG  
Sbjct: 97  AIKTGTHPKATTEKNIENFRKQIKSLGFSYDWNREISTHSSDYYRWTQWIFIQLFNKGLA 156

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +  + +    ++EV  G            V       +  +++ Y DKLLS 
Sbjct: 157 YESHTPINWCGQCKTGLANEEVKDGK----CERCGTTVVRKNIRQWVLKITEYADKLLSD 212

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +S          +   I   +
Sbjct: 213 LDSVDWPESVKLMQRNWIGRSE 234



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 107/332 (32%), Gaps = 86/332 (25%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTT----TGYLDNP 248
                +G   L+   +       +           M  W  +   YL             
Sbjct: 464 YEPSGTGESPLAKIDEWVHCSCPVCGGEAKRETNTMPQWAGSCWYYLRYLDPKNANEFVS 523

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG 300
              +A + P DL+V G +    H +Y   +         +S + P  + V       +  
Sbjct: 524 KEMEAYWMPVDLYVGGAEHAVLHLLYARFWHKVLFDLGLVSTSEPFKRLVNQGMITSYAF 583

Query: 301 E----------------------------------KISKSLGNVIDPIEVIEEVGVDALR 326
           +                                  K+SKSL NVI+P E+I E G D++R
Sbjct: 584 QRKDKSLVPTDMVEEQSPDVFIEKATGETLERVIAKMSKSLKNVINPDEIITEFGADSMR 643

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            + +          +   GL          G+   + R   +    +D    T     E 
Sbjct: 644 MYEMFMGPLEVSKPWATTGLV---------GVYRFLDRIWRL----FDEREITDA---EP 687

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
           DE +     + ++++  +  +   + A++Q++ LV+E+ +                    
Sbjct: 688 DEELKRTLHKSIKKVTYDTNSLNFNTAISQMMVLVNELYK-------------------- 727

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +  +  EV   L  LL  +VP LA ++++ L 
Sbjct: 728 IEILPREVGETLVKLLGPYVPHLAEELWERLG 759


>gi|194466707|ref|ZP_03072694.1| leucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453743|gb|EDX42640.1| leucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 806

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  + TT+ + +   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKFYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV       +  +++AY D+L
Sbjct: 148 AYESEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 105/263 (39%), Gaps = 45/263 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFL------- 279
            A +++        + D   A      +W P DL+V G +    H +Y   +        
Sbjct: 495 WAGSSWYWLRYTDPHNDEEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLG 554

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      + 
Sbjct: 555 LVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDQYGADTLRLYEMFMGPLEES 614

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D+ GL         +G    V R   +++ D + +      F   D  +  V ++ +
Sbjct: 615 VPWDEKGL---------HGANKWVQRVWRLLMDDNNHLRDRVSTFN--DGKLTKVYNQTV 663

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +++ E+ +    + A++Q++  V+E  +                    V  + VE ++  
Sbjct: 664 KKVTEDYERMHFNTAISQLMVFVNEAYK--------------------VDDLPVEYMKGF 703

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++   +P +A +++     +D
Sbjct: 704 VKMIAPIMPHMAEELWSQFGESD 726


>gi|148544519|ref|YP_001271889.1| leucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153883|ref|YP_001842224.1| leucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363053|ref|ZP_03847189.1| leucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682840|ref|ZP_08162356.1| leucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980078|sp|A5VL28|SYL_LACRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229470716|sp|B2G8G2|SYL_LACRJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148531553|gb|ABQ83552.1| leucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225227|dbj|BAG25744.1| leucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071874|gb|EEI10161.1| leucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977190|gb|EGC14141.1| leucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 806

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F ++N  +FRD    L  SY  D  + TT+ + +   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKFYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV       +  +++AY D+L
Sbjct: 148 AYESEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 139/440 (31%), Gaps = 58/440 (13%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A  +       F  + +   + + +  DIS   F    +             +
Sbjct: 333 YGTGAVMAVPSGDQRDYDFATKFNLPIKPIIEGADISEGAF----DGDGKHINSGFLDGL 388

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +      K               N          Q Y  +  PV   ++           
Sbjct: 389 NIADAKQKMIDWLEEHDAGHKKVNYRLRDWIFSRQRYWGEPIPVIHWDDGTTSLVPED-- 446

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI- 232
                         LP     E     +S L ++      +D   +        M  W  
Sbjct: 447 ---------ELPLELPKTDNIEPSGTGESPLANVEDWVNVYDENGRHGLRETNTMPQWAG 497

Query: 233 --DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
                  Y       +        +W P DL+V G +    H +Y   +         + 
Sbjct: 498 SSWYWLRYTDPHNDEEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLVP 557

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  K V     +    EK+SKS GNV++P +++++ G D LR + +      +   +
Sbjct: 558 TKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDQYGADTLRLYEMFMGPLEESVPW 617

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+ GL         +G    V R   +++ D + +      F   D  +  V ++ ++++
Sbjct: 618 DEKGL---------HGANKWVQRVWRLLMDDNNHLRDRVSTFN--DGKLTKVYNQTVKKV 666

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+ +    + A++Q++  V+E  +                    V  + VE ++    +
Sbjct: 667 TEDYERMHFNTAISQLMVFVNEAYK--------------------VDDLPVEYMKGFVKM 706

Query: 462 LQAFVPKLANKIFDILFVAD 481
           +   +P +A +++     +D
Sbjct: 707 IAPIMPHMAEELWSQFGESD 726


>gi|238752262|ref|ZP_04613742.1| Isoleucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238709530|gb|EEQ01768.1| Isoleucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 938

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 118/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ E G     +   ++          + +P+     +  E++    + L +    R 
Sbjct: 441 VQWIPEWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEMLHPRSTELMEAVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----VRPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYSGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI    +N   H  + +++   S      Y
Sbjct: 668 GFDPAKHQVKPEDMVVVDRWAVGRAQEAQAEIMAAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNEL 778



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 65/207 (31%), Gaps = 17/207 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVTPAEFRTACRKYAAEQIEAQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                KI D G ++KG     +     +   + EV Y        + + N V        
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCRSSLAEAEVEYYDKTSPSIDVRFNAVDAA-AVSE 224

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
            F ++  +  +     +   + LP  R
Sbjct: 225 KFGVTNAEGPISLVIWTTTPWTLPANR 251


>gi|23008069|ref|ZP_00049667.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 192

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 2/143 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K Y+     YP+ + HIGH     + DV+AR+ R  G +VL   G D  G     AA 
Sbjct: 41  RPKYYVLEMFPYPSGRIHIGHVRNYAMGDVVARYKRAKGHNVLHPMGWDAFGLPAENAAM 100

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
              V  + +   N    R     + +S D    I T +  ++   + ++     KG + +
Sbjct: 101 ERKVNPRDWTYANIATMRGQLQSMGLSLDWSREIATCDPDYYKHQQRMFLDFLAKGLVTR 160

Query: 122 GCYSGWYSLRDEAYYNDDEVYKG 144
                 +   D     +++V  G
Sbjct: 161 RTAKVNWDPVDHTVLANEQVIDG 183


>gi|29346216|ref|NP_809719.1| isoleucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81445223|sp|Q8A9K9|SYI_BACTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29338111|gb|AAO75913.1| isoleucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 1162

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 98/270 (36%), Gaps = 12/270 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIYWP 276
                 ++ VW D+         Y           + +PAD    G D     F  ++  
Sbjct: 625 MKRESDLIDVWFDSGAMPYAQIHYPFENKNILDNREVYPADFIAEGVDQTRGWFFTLHAI 684

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +  
Sbjct: 685 ATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSSPW 744

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            +  +D DG+++                ++   +  ++            E D  ILSV 
Sbjct: 745 DNLKFDIDGIEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILSVL 804

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVLYV 450
           + +++E+          +A   +   V++   + Y   + ++ W           +    
Sbjct: 805 NTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAYQT 862

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               +  +A L+    P  A++++  L  A
Sbjct: 863 LYTCLETVAKLMAPISPFYADRLYTDLTTA 892



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTT 98
           +  + + A   TK  +                  + ++ + D+   +   +       T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHQMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFLAWTTTPW 239


>gi|147907242|ref|NP_001088439.1| valyl-tRNA synthetase [Xenopus laevis]
 gi|54311439|gb|AAH84762.1| LOC495303 protein [Xenopus laevis]
          Length = 1243

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 89/549 (16%), Positives = 154/549 (28%), Gaps = 117/549 (21%)

Query: 35   ARFHRLDGLDVLFTTG-------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
             R+  L G  V+            DE             +T            R   D +
Sbjct: 533  QRYKHLKGHHVVHPFCSRLLPIVFDEFVDMNF-GTGAVKITPAHDPTDYDVGMRHSLDFV 591

Query: 88   DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +I  DD                +  +           +       +   ++  V      
Sbjct: 592  NIMDDD-------GTLVNVPPPFLGMKRFDARKAVLAALKEKGFFKEVKDNPMVVP---- 640

Query: 148  QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
               +   + V+ + +  ++ R      +           I P        S++   ++D 
Sbjct: 641  -VCSRSKDIVEPLLKPQWYVRCDEMGKRAADAVRDGHLEIKPEFHTKTWFSWMD-NIRDW 698

Query: 208  SLSRKTFDWGIKIP------DDP------------------------------------- 224
             +SR+   WG +IP      +DP                                     
Sbjct: 699  CISRQ-LWWGHRIPAYFVTVNDPSVPAGEDTDGKYWISGRSEQEAKEKAARVFNVAAEKI 757

Query: 225  -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                 + ++  W  +     +  G+ +  +     F+P  L   G DIL F    +    
Sbjct: 758  SLRQDEDVLDTWFSSGIFPFSIFGWPNQTE-DLQVFYPGTLLETGHDILFFWVARMVMLG 816

Query: 278  FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
              L+  LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 817  LTLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVINGITLEGLHKQLLESNLDPA 876

Query: 318  -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                              E G DALR+ L    + G+D   D + +         N I N
Sbjct: 877  ELERAKDGQKYDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILG--YRHFCNKIWN 934

Query: 361  LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                ++  +  ++         G  + +D  ILS  S  +       QN         V 
Sbjct: 935  ATKFAMRSLGDNFSPPDFAGACGQESLADRWILSRLSIAVDLCNTGFQNYDFPGITTAVY 994

Query: 419  SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +       D Y +  KP  L  ++    S         +     LL  F+P L  +++  
Sbjct: 995  NFWLYELCDVYLECLKPVFLS-SDETAISVGRNTLYTCLDVGLRLLSPFMPFLTEELYQR 1053

Query: 477  LFVADENRC 485
            L     +R 
Sbjct: 1054 LPRRPSSRT 1062



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 318 FMMCIPPPNVTGSLHLGHALTNAIQDCLTRWHRMRGELTLWNPGCDHAGIATQVVVEKKL 377

Query: 67  VTT----------KVFVDQNSRNFRDMADVL---------DISYDDFIRTTEKRHHDTCR 107
                        + F+++  +  R+  D +          + +D    T + +     +
Sbjct: 378 WRERGKNRHDLGRENFIEEVWKWKREKGDRIYHQLRILGSSLDWDRACFTMDPKLSFAVQ 437

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ + G IY+      +S    +  +D EV
Sbjct: 438 EAFIRLHEAGIIYRSKRLVNWSCTLNSAISDIEV 471


>gi|260220670|emb|CBA28450.1| Valyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 960

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 119/390 (30%), Gaps = 93/390 (23%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---- 226
             K +   +S     +P    N   +   + ++D  +SR+   WG  I    D       
Sbjct: 389 AQKAIDAVQSGEVKFVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGNVIV 446

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNP-----DGSKAKFWPADL 260
                                ++  W  +     +T G+ +             + P+  
Sbjct: 447 ARNEAEAQAKAPGKTLRRDEDVLDTWYSSALVPFSTMGWGNEGAGTGATDDYNLYLPSST 506

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            V G DI+ F    +       +  +P             +G+K+SKS GNV+DP+++I+
Sbjct: 507 LVTGYDIIFFWVARMIMMTTHFTGRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLID 566

Query: 319 E-------------------------------------VGVDALRYFLVREIACGKDGFY 341
                                                  G DALR+      + G+   +
Sbjct: 567 GIALSPLLDKRTTGLRKPETAPAVRKNTEKEFPEGIPAYGADALRFTFAALASLGRSINF 626

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--------------AFTESD 387
           D    +     +  N + N  +R V M  +  D  +                   F++SD
Sbjct: 627 DSKRCEG--YRNFCNKLWN-ATRFVLMNCEGQDCGLMEHSKEQCAPGGVAHGYLEFSQSD 683

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS 445
             I+S+  +   ++ +   +  +      +   V     D Y +  K      T+  + +
Sbjct: 684 RWIVSLLQKTEADVAQGFADYRLDNVANTIYDFVWNEFCDWYLEIAKVQINTGTDAQKRA 743

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           T     +  +  +  +     P +  +++ 
Sbjct: 744 T-RRTLIRTLETILRMAHPITPFITEELWQ 772



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 61/173 (35%), Gaps = 22/173 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           +   I           H+GHA+   I D L R+HR+ G +  +  GTD  G       + 
Sbjct: 46  KNFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMAGFNTAWIPGTDHAGIATQIVVER 105

Query: 64  -------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHHD 104
                            T KV+  +       +   R M D +D S + F  T + +   
Sbjct: 106 QLQEQKVSRHDLGREAFTKKVWEWKEKSGNTITTQMRRMGDSVDWSREYF--TMDPKLSQ 163

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T    + ++ ++G IY+G     +     +  +D EV    +         P+
Sbjct: 164 TVTETFVQLYEQGLIYRGKRLVNWDPILMSAVSDLEVESEEEDGSLWHIRYPL 216


>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++       ++         PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERNDLQR------PADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433828|sp|Q819R4|SYI1_BACCR RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782365|sp|B7H6N1|SYI_BACC4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
 gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824207|sp|Q636D1|SYI1_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HQGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|29832672|ref|NP_827306.1| isoleucyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81717061|sp|Q82AC9|SYI_STRAW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29609792|dbj|BAC73841.1| putative isoleucyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 1047

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 124/387 (32%), Gaps = 13/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G++ +  +N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLQENEKTNWFPESVKHGRFGDWLNNNVDWAL 454

Query: 162 EEGYFFRLSA----YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               F+         ++  L+   S  E           +   +  +  ++ +      G
Sbjct: 455 SRSRFWGTPLPLWTCEEGHLTCVGSRAELSELTGTDQSNLDPHRPFIDAVTFACPQDGCG 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                 P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 RTATRVPE-VIDAWYDSGSMPFAQWGYPYKNKELFESRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P      D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSEADPAPADRPVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++ + +++    RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LHALTDQVTQALESYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V+  +  L+    P +  +++  L   
Sbjct: 750 VVETVTRLMAPLTPFITERVWQDLVFP 776



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +      +D  RT +  +
Sbjct: 100 VEKELGFSGKQDIEAYGIAEFNAKCRESVTRHTDAFEELTSRMGYWTDLNDPYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG + +      +  +DE   +D E+ +G +
Sbjct: 160 IESVWWSLKEIFNKGLLVQDYRVAPWCPQDETGLSDHELAQGYE 203


>gi|330921717|ref|XP_003299541.1| hypothetical protein PTT_10549 [Pyrenophora teres f. teres 0-1]
 gi|311326766|gb|EFQ92380.1| hypothetical protein PTT_10549 [Pyrenophora teres f. teres 0-1]
          Length = 1094

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 121/357 (33%), Gaps = 49/357 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +    +  Y    E        +E+    ++  +  + + K F          
Sbjct: 551 WCLSRQLWWGHQVPAYFIQLEGGDGGRSEDELWVTGRTEEEARAKAEKKFPGEKFTLSRD 610

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ +       K +P  +   G DIL F    + + +  L+ 
Sbjct: 611 EDVLDTWFSSGLWPFSTLGWPNQTA-DLEKLFPTSVLETGWDILFFWVARMIFLSLYLTG 669

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------ 317
            +P  K+V+ H  I    G K+SKSLGNV+DP++++                        
Sbjct: 670 KVPF-KEVYCHSLIRDSDGRKMSKSLGNVVDPVDIMDGITLQKLHDQLRAGNLDPKELTK 728

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR  LV     G D  +D + +         N I      
Sbjct: 729 AEKYQKTAFPQGIPECGADALRMALVGYTTGGGDISFDVNVI--HGYRRFCNKIYQATKY 786

Query: 365 SVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +  +   +     I   GA +  +  IL   +   ++I ++++ +    A         
Sbjct: 787 VIGRLGDSFTPREKISKTGAESLPERYILHQLNTAAKKINDHLEAREFSLATQVAYKYFY 846

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V   D Y +  K     + + ++  +        I     ++  F+P L  +++  L
Sbjct: 847 VYLCDTYIENSKA-IFDEGSEEQKESAKQTLYTAIEGGLTMIHPFMPFLTEELWQRL 902



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K      I         + H GHA    + DVL R+HR+ G   L+  G D  G     
Sbjct: 165 VKGPGHFVIPIPPPNVTGKLHCGHALATSLQDVLIRWHRMRGYTTLYLPGCDHAGIATQS 224

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +                      T  + ++  ++       +  S+D      T ++ 
Sbjct: 225 VVEKMLKRRENKTRYDLGRQKFLERTMEWKEEYHQHLTHTLRRMGGSFDWTREAFTMDEN 284

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ + G IY+      + 
Sbjct: 285 LSKAVTETFVRLHEDGLIYRSNRLVNWC 312


>gi|296197731|ref|XP_002746402.1| PREDICTED: valyl-tRNA synthetase [Callithrix jacchus]
          Length = 1264

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        ++    + P    P  R           L
Sbjct: 705  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVIVNDPAVPPGEDPDGRYWVSGRNEAEAL 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + KD+         G  +  D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKDFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGADQVAAECARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 397 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 456

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 457 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 921

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEY 200


>gi|157872788|ref|XP_001684921.1| valyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127991|emb|CAJ06733.1| putative valyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 967

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 86/477 (18%), Positives = 140/477 (29%), Gaps = 108/477 (22%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQH 154
            H+  +++   +     +        +  R E     +E+                    
Sbjct: 307 RHNLQQLVMMDLKGYVTMEPFKGMHRFDCRREIVKKLEEMGLLRGVEPYEYRVGRCERTG 366

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + V+ M    +F   S    + +    +    + P         +++  +K   +SR+  
Sbjct: 367 DIVEPMLMPQWFIDCSDMARRAVEAVRNGDLCLYPPSHEAVWYHWLE-NIKPWCVSRQ-L 424

Query: 215 DWGIKIP-----------DDPQ---------------------------------YIMYV 230
            WG +IP            DP                                   ++  
Sbjct: 425 WWGHRIPAYKVVGSLPKDVDPWVVARNLQEAHAKAKKKFGLTDEQVAEASFEQDPDVLDT 484

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KK 289
           W  +     +T G+  + D  K +F+P  L   G DIL F         L     LP K+
Sbjct: 485 WFSSGLWPFSTLGWPTDSDDMK-RFFPNSLMETGHDILFFWVARMVMLSLHFTNKLPYKE 543

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIE------------------------------ 318
           VF H  +  K GEK+SKS GNVIDP+ VI                               
Sbjct: 544 VFLHAMVRDKNGEKMSKSKGNVIDPLYVIHGVSLQTLHDTVRSGNLSDKEVEKAIKQQKE 603

Query: 319 -------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL- 370
                  E G DALR+ L+     G+    D   +         N + N+V   +   L 
Sbjct: 604 FFPEGIPECGSDALRFGLLSYTQSGRSVNLDIQRVVA--YRQFCNKLWNVVRYVLYHALG 661

Query: 371 ------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLV- 421
                 K                  ILS     + E  + M         A   V     
Sbjct: 662 TDYVPSKQQFSPAEDAAMLPLECRWILSRLDAAIAETTQGMSEGLYDFALATGAVYRFWL 721

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  KP   K     +   V  V + V+ +   LL   +P L  +++  L
Sbjct: 722 HELCDVFLELTKPTIQKGGEKQQL--VQDVLLHVVEKALRLLHPMMPFLTEELWHRL 776



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D L RFHR+ G + L+  GTD  G       + 
Sbjct: 37  KPFVIIAPPPNVTGYLHLGHALTGAVQDTLIRFHRMKGDNTLYLPGTDHAGIATQVVVER 96

Query: 65  AGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                     F   ++    +    + +S D      T +++    
Sbjct: 97  RVMKEEGKSRHDLGRDEFMKRLWEFKKSHAGMITEQFRRIGLSLDWTRERFTMDEQSSAA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++ + G +++      +    ++  +D EV  
Sbjct: 157 VVEAFVRLHEDGLVHRDTRLVNWCCALQSAISDLEVEF 194


>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 913

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 500 HQGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|212697092|ref|ZP_03305220.1| hypothetical protein ANHYDRO_01657 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675867|gb|EEB35474.1| hypothetical protein ANHYDRO_01657 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 802

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +++K Y      YP+ Q  H+GH       D++AR  RL+G +V++  G D  G     
Sbjct: 29  TDKKKFYPLVEFPYPSGQGLHVGHPRPYTALDIVARKRRLEGENVIYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +   +    N +NF+     +  S+D    + TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNHIHPAIVTRDNIKNFKAQMKSIGFSFDWSKEVNTTDPNYYKWTQWIFIQLYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G          + V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPVNWCPSCKVGLANEEVVDGK----CERCGSEVTHKVKNQWMLKITEYADRLID 204

Query: 179 YYESHPEFILPIERRNEVI 197
             +          ++   I
Sbjct: 205 DLDEVDYEEKIKIQQKNWI 223



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 113/348 (32%), Gaps = 63/348 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +  +  N        +       G   LS   
Sbjct: 414 YKLRDWVFSRQRYWGEPIPMIYCEEHGWIAEKEENLPIKLPDVDSYEVTDDGESPLSKID 473

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVI 263
           +  +    I   P       M  W  +   YL      +N D         + P D +  
Sbjct: 474 EFVNTACPICGKPAKRETDTMPQWAGSSWYYLRYIDPNNNEDLASKEKLDYYTPVDWYNG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    +K+SKS GNV++P +
Sbjct: 534 GMEHTTLHLLYSRFWHKFLYDLGKVPTKEPYKKRTSHGMILGEDHQKMSKSRGNVVNPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYD 374
           ++ + G D LR + +          +  +G+K  R   +    + +LV            
Sbjct: 594 IVRDYGADTLRAYEMFIGDFRSTAPWSDEGVKGCRKYLERVFNLYDLV------------ 641

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                     E    +  + ++ ++++ E+ ++   + A+A ++SL++E           
Sbjct: 642 ------EDGDEYTNELEILINQTIKKVSEDYESLKYNTAIAALMSLLNE----------- 684

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
                       +  +T +  +   ILL    P L  ++++ +    +
Sbjct: 685 ---------MRNIGKITKKDYKTYLILLNPVAPHLTEELWEEIGFEGQ 723


>gi|86606359|ref|YP_475122.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554901|gb|ABC99859.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 936

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 86/449 (19%), Positives = 146/449 (32%), Gaps = 51/449 (11%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTC-RIL-----WKKISDKGDIYKGCYSGWYSLRDEA 134
           ++        YD   RT E        +       +++++ +              R  A
Sbjct: 400 KEEPYNHKYPYDW--RTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIPPEGENRITA 457

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              +         Q       PV + +EE     L+A     +    +        +R  
Sbjct: 458 MVKERS-DWCISRQRAWGVPIPV-FYDEETGEVLLTAETIDHIKAIFAQEGSDAWWKRPV 515

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   +      +  + T              M VW D+ +++            ++  
Sbjct: 516 EELLPEQYRRHGRTYRKGT------------DTMDVWFDSGSSWAAVAR-------ARGL 556

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +P DL++ G D     F +    +  ++   P    +     +  KG+K+SKSLGNVID
Sbjct: 557 GYPVDLYLEGSDQHRGWFQSSLLTSVAVNGQAPYKAVLTHGFVLDEKGQKMSKSLGNVID 616

Query: 313 PI---------EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           P+         +     G D LR ++   +    D    K  L +   AD+   I N   
Sbjct: 617 PLLLINGGSNPQTDPAYGADVLRLWV-SSVDYSGDVPIGKTILGQ--MADVYRKIRNTAR 673

Query: 364 RSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
             +S +          P  A TE D  IL     V  EI E+ +N   +R    V +   
Sbjct: 674 FLLSNLYDFNPAQDAVPFEALTELDRYILHRLQEVGAEITESFENYQFYRFFQAVQNFCV 733

Query: 421 VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V   + Y D  K           R      V   V+  LA  +   +  LA +I+  L  
Sbjct: 734 VDLSNFYLDIGKDRLYISHARSLRRRQCQTVLSLVLENLAKAIAPVLSHLAEEIWSYLPY 793

Query: 480 ADENRC-FQSLDQRLKPGF---MLHKTFD 504
               R  F+    RL   +    L  T++
Sbjct: 794 PKPTRSVFEGGWMRLPEQWRDPQLAATWE 822



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 16/159 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           +   +     Y N   H+G     I+ D++ ++H L G  V +  G D HG  I      
Sbjct: 47  DPFVLHDGPPYANGDIHMGTTLNKILKDIINKYHLLQGRKVRYVPGWDCHGLPIELKVLQ 106

Query: 63  -----QNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                +   +T        + +        R     L +   +D    T    +      
Sbjct: 107 SLSPQERQSLTPLQLRQKAREYALHYVNVQRASFQRLGVWGDWDRPYLTLSPEYEAAQIE 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           ++ +++ KG IY+G     +S   +    + E+    + 
Sbjct: 167 VFGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPDNH 205


>gi|294660540|ref|NP_853350.2| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286869|sp|Q7NAR7|SYV_MYCGA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|284812203|gb|AAP56918.2| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930843|gb|ADC30782.1| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 860

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 141/386 (36%), Gaps = 51/386 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           VQ +  + +F   + + D++     +  +  +  +R  + I+      +D  +SR+    
Sbjct: 360 VQPLLSKQWFLITTKFVDEIKKLVNNEDQIKIYPKRFLDTINNWLDHNQDWCISRQLVWG 419

Query: 216 -----WGIKIPDDP---------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                W  K   D                  ++  W  +    L                
Sbjct: 420 HQIPAWYHKDHPDEVIVSINSPGDDYYRDSDVLDTWFSSALWPLICFD-DGLDQKEFNAN 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  L V   DI+ F    + + ++LL  ++P    +     +     K+SKSL N +DP
Sbjct: 479 FPNSLLVTAYDIVFFWVLRMIFMSWLLKKSIPFHDLLLHGLILDEHNRKMSKSLNNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           I++I++ G DALR FL    + G+D  Y+ + +     A   N + NL        LK  
Sbjct: 539 IQIIDQYGADALRLFLTSNTSPGEDVSYNVEKINAA--ASFLNKLWNLARY-----LKLI 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
           D    T       D  I+   + V   I++ ++      +  Q+   + +   + Y +  
Sbjct: 592 DQSKLTDQPLDSLDHWIIHRFNEVNAGIQDKLKEYRFALSNKQLSDFIWDDFANVYIELN 651

Query: 432 K--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           K   W   K           +  ++ R+  I+L   VP +  +I++    +D      S+
Sbjct: 652 KKAQWSKAK---------FELANDIFRKFLIMLHPSVPFITEQIYNTFEFSDSK---PSI 699

Query: 490 DQRLKPGFMLHKT----FDPIFPRFL 511
                PG +  +     FD IF   +
Sbjct: 700 ILEKWPGLIKIENALDHFDQIFNLII 725



 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 18/145 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           HIGHA+ + I D++ R+ +L    + +  GTD  G       ++
Sbjct: 44  KPFSIIMPPPNLTGILHIGHAWNLSIQDLIVRYQKLVMGKINWIPGTDHAGIATQTKFES 103

Query: 65  AGVTTK----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
              T +                 +  ++S+  ++ A  L ++  +     T  +  +   
Sbjct: 104 IQRTKEINYKKDDRTTHFNNIYQWSQESSQTIKNQAKSLGLALNWKKEKFTLSQESNKYV 163

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
             ++ K+  +G I K      +  +
Sbjct: 164 LDVFVKLYQQGYIVKKYTLVNWDTK 188


>gi|302680667|ref|XP_003030015.1| hypothetical protein SCHCODRAFT_77472 [Schizophyllum commune H4-8]
 gi|300103706|gb|EFI95112.1| hypothetical protein SCHCODRAFT_77472 [Schizophyllum commune H4-8]
          Length = 1076

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 102/270 (37%), Gaps = 12/270 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y           +PA     G D     F+ +   +  L  
Sbjct: 527 EEVFDCWFESGSMPYAQIHYPFENKDLFKSCFPAHFVCEGIDQTRGWFYTLLVLSTHLFG 586

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFY 341
           + P    +     +   G+K+SKSL N  DP  +++  G DA R +LV       D   +
Sbjct: 587 SAPWQNLITHGLVLAADGKKMSKSLRNYPDPNHILDTYGADATRMYLVNSPVVRGDNLRF 646

Query: 342 DKDGLKKRVNADLANGIGNLVSR------SVSMILKDYDGMIPTPGAFTESDESILSVCS 395
            +DG+++ V+  L   + +                 ++      P      D  IL+ C 
Sbjct: 647 REDGVREVVSKVLLPWLNSFRFFLGHSALLTKTTGAEFKYNAHAPLPNNIMDRWILARCQ 706

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++ +RE M    ++  + +++ L+ E+ + Y    +     +   +   + L    E 
Sbjct: 707 SLIKLVREEMAAYRLYTIIPRLLGLIDELTNWYIRFNRKRLKGENGKEDTVSALNTLFEA 766

Query: 455 IRQLAILLQAFVPKLANKIFDIL--FVADE 482
           +  L   L ++ P +   I+  L  F+ ++
Sbjct: 767 LFTLCRTLSSYTPFMTENIYQALRPFIPED 796



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 19/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +    PH GH     + D++ R    +G  V+   G D HG  + + 
Sbjct: 39  EGKPEFSFYDGPPFATGLPHYGHLLAGTVKDIVTRHASTNGYHVIRRFGWDTHGLPVEQD 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  +R   + +   I +D+  +T     
Sbjct: 99  IDKRFNIRGKDDVMKMGIDKYNAECRSIVMRYSSEWRATVERMGRWIDFDNDYKTLNTTF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            ++    + ++  KG +Y G     YS       ++ E     
Sbjct: 159 MESVWWAFSELFKKGLVYHGLRVMPYSTGLNTPLSNFEAQMDY 201


>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 913

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 500 HSGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 135/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+    ++ + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTNMPEAVQ 787



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|239626672|ref|ZP_04669703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516818|gb|EEQ56684.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 804

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 29  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLKGKYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV      + N  N +     +     +D  + TT+   +   + ++ ++  KG  
Sbjct: 89  AIKMGVHPAKSTEANISNIKKQIKQIAAIYDWDMEVNTTDPEFYKWTQWIFVQMFKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY ++LL+ 
Sbjct: 149 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTTVTKKNLRQWMLKITAYAERLLND 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 205 LDKLDWPEKVKKMQTDWI 222



 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 118/346 (34%), Gaps = 56/346 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+      +          + + ++   GI 
Sbjct: 414 YKLRDWVFSRQRYWGEPIPIIHCPKCGCVPVPEEELPLRLPDVESYQPTGTGESPLAGID 473

Query: 220 IPDD------------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +                M  W         Y+ +    +     KA  + P D+++ 
Sbjct: 474 EWVNTTCPVCGAPAKRETNTMPQWAGSSWYFLRYVDSHNSEELVSREKADKYLPVDMYIG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 534 GVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D+LR + +       D  +D  G++         G+   ++R  ++++ + D 
Sbjct: 594 LVRDYGCDSLRLYELFVGPPELDAEWDDRGIE---------GVSRFLNRFWNLVMDNKDK 644

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            I       ++ + ++ +  +++ +I        ++  ++  +      ++  D  K   
Sbjct: 645 DI-------QASKEMIKLRHKLVYDIEYRFNQFSLNTVISGFMEYN---NKLIDLAK--- 691

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K+   D+         E +R    LL  F P +  +++  L   D
Sbjct: 692 -KEGGIDK---------ETLRTFVTLLAPFAPHIGEELWQQLGGTD 727


>gi|301620268|ref|XP_002939512.1| PREDICTED: valyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis]
          Length = 1188

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 91/550 (16%), Positives = 158/550 (28%), Gaps = 119/550 (21%)

Query: 35   ARFHRLDGLDVLFTTG-------TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
             R+  L G  VL            DE    ++       +T            R   D +
Sbjct: 478  QRYKHLKGHHVLHPFCSRLLPIVFDEFVD-MSFGTGAVKITPAHDPTDYEVGMRHSLDFV 536

Query: 88   DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            +I  D+                +  +           +       +   ++  V      
Sbjct: 537  NIMDDN-------GTLINVPQPFLGMKRFDARKAVLDALKEKGLFKEVKDNPMVVP---- 585

Query: 148  QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
               +   + V+ + +  ++ R      +           I P     +        ++D 
Sbjct: 586  -VCSRSKDIVEPLLKPQWYVRCDEMGKRAADAVRDGHLLIKPE-FHTKTWFIWMDNIRDW 643

Query: 208  SLSRKTFDWGIKIP------DDP------------------------------------- 224
             +SR+   WG +IP      +DP                                     
Sbjct: 644  CISRQ-LWWGHRIPAYFVTVNDPSVPAGEDTDGKYWISGRSEQEAKEKAARVFNVAPEKI 702

Query: 225  -----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
                   ++  W  +     +  G+ +  +     F+P  L   G DIL F    +    
Sbjct: 703  SLRQDDDVLDTWFSSGIFPFSIFGWPNQTEDLNV-FYPGTLLETGHDILFFWVARMVMLG 761

Query: 278  FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------- 317
              L+  LP  +           G K+SKSLGNVIDP++VI                    
Sbjct: 762  LTLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVINGITLEGLNKQLLESNLDPA 821

Query: 318  -----------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
                              E G DALR+ L    + G+D   D + +         N I N
Sbjct: 822  ELERAKDGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILG--YRHFCNKIWN 879

Query: 361  LVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
                ++  +  +Y         G  + +D  ILS  S  +       QN         V 
Sbjct: 880  ATKFAMKGLGDNYSPPDFAGACGQESLADRWILSRLSFAVDLCNNGFQNYDFPGITTAVY 939

Query: 419  SLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFD 475
            +       D Y +  KP  L  ++ + A +V   T+   +     LL  F+P L  +++ 
Sbjct: 940  NFWLYELCDVYLECLKPVFL--SSDEAAISVGRNTLYTCLDAGLRLLSPFMPFLTEELYQ 997

Query: 476  ILFVADENRC 485
             L     +R 
Sbjct: 998  RLPRRSSSRT 1007



 Score = 40.9 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 36/135 (26%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+        L   G+               
Sbjct: 318 FMMCIPPPNVTGSLHLGHALTNAIQDCLTRWKGDRIYHQLRILGS--------------- 362

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
                                 + +D    T + +     +  + ++ + G IY+     
Sbjct: 363 ---------------------SLDWDRTCFTMDPKLSFAVQEAFIRLHEAGIIYRSKRLV 401

Query: 127 WYSLRDEAYYNDDEV 141
            +S    +  +D EV
Sbjct: 402 NWSCTLNSAISDIEV 416


>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEY 200


>gi|282881584|ref|ZP_06290253.1| isoleucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304570|gb|EFA96661.1| isoleucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 1226

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 18/237 (7%)

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
           F+PAD    G D     F  ++  A ++  ++     + +   +  KG K+SK LGNV +
Sbjct: 730 FFPADFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISTGLVLDAKGNKMSKHLGNVKN 789

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P ++IE  G DA+R++++   +   +  +D++G+ + V       + N  S     +  +
Sbjct: 790 PFDMIERYGADAVRFYMMTNSSPWDNLKFDEEGVDE-VRRKFFGTLYNTYSFFA--LYAN 846

Query: 373 YDGMIPT-------PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
            D   PT            E D  I+S    +++ + +++ N    RA   + + V++  
Sbjct: 847 VDDFQPTGCFDKTKLKDAPEIDRWIISKLHSLIKGVEDDLNNFDPTRAGRLIDTFVNDDL 906

Query: 424 VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + Y   + ++ W   K   +   +      E +  ++ L   F+P  A++++  L 
Sbjct: 907 SNWYVRLNRKRFW--GKEMSEDKLSAYNTLYECLLTISKLAAPFIPFFADQLYADLG 961



 Score = 54.0 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  VL   G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMQGFHVLRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V + +  +R + + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASEHYISVEDYNRKCRENVMKFTEEWRRLTEEMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ ++G +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLKQLYNQGLLYKGYTIQPYSPGAGTGLSSHELNQPGC 206


>gi|237713271|ref|ZP_04543752.1| isoleucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406588|ref|ZP_06083137.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647296|ref|ZP_06724891.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808541|ref|ZP_06767289.1| isoleucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446738|gb|EEO52529.1| isoleucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355291|gb|EEZ04382.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292637372|gb|EFF55795.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444274|gb|EFG12993.1| isoleucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 1162

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQIHYPFENKELLDNRQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+++                ++   +  ++            E D  ILS
Sbjct: 743 PWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 803 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 861 QTLYTCLETVAKLMAPVSPFYADRLYTDLITA 892



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TT 98
           +  + + A   TK  + +       N+   +D+        D   R            T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHRMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMTEWGTPYFIAWTTTPW 239


>gi|257791308|ref|YP_003181914.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475205|gb|ACV55525.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 948

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/454 (16%), Positives = 147/454 (32%), Gaps = 25/454 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV---FVDQNSRNFRDMADVLDI--SY 91
           +      DV      D++G    +A   AG+        + +  R    +    +I  SY
Sbjct: 350 YLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDVDEANPVIIEWLRERGTLVAQKEILHSY 409

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               R  E          +  +           +    +     +  + +      +   
Sbjct: 410 PHCWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIPAWASNRIGSMVADRPDW 469

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  W       F+ +     + +         L   R      F +   + L    
Sbjct: 470 CISRQRSWGVP-IPVFKCAKCGSTVANEQTFDAVIDL-FYREGADAWFTREPSEYLPRGV 527

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G       + I+ VW ++  ++ +          ++   +PAD+++ G D     
Sbjct: 528 KCETCGCTELTPEKDILDVWWESGVSHTSVLK----HREAEGLRFPADMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +       P    +     +  +G K+SKSLGN +DP EV+ + G D LR ++
Sbjct: 584 FQSSLLTSMGAYGVPPYKAVMHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSGADVLRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
                  +D     + L++   ++    I N   R +   L D+D          A    
Sbjct: 644 ASVDYS-QDVSISDEILQR--TSEAYRRIRNTF-RFLLGSLDDFDDQKDAVSDWNALEPL 699

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR-YFDAQKPWELKKTNPD-- 442
           D+  +     +L ++         H     V   +V+++   Y DA K   L    PD  
Sbjct: 700 DQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKD-RLYSEAPDSP 758

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R   V  V + ++  L  +L   +    +++++ 
Sbjct: 759 RRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEH 792



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 47  KDGKPFILHDGPPYANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHM 106

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
            +      K               + ++     R+    L ++ D      T    +   
Sbjct: 107 VEKTLGPDKMAKIDQPTLRRLCREWAEKYVDVQREGFKRLGVNADWEHPYLTFTPNYEAG 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              ++K++   G +Y+G     +  R      + E+  
Sbjct: 167 NVEVFKRMYLDGSVYRGRKPIHWCKRCHTALAEAEIEY 204


>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|254782363|sp|B7IUQ5|SYI_BACC2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 913

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 500 HSGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|187918124|ref|YP_001883687.1| leucyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689284|sp|B2RZW1|SYL_BORHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119860972|gb|AAX16767.1| leucyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 842

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G      
Sbjct: 33  KEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N + F++    L  +Y  D  IRT ++ ++   + ++ K+  KG  
Sbjct: 93  AIQTGEHPKKITEKNIKKFKEQIKALGFAYDWDREIRTHDENYYKWTQWIFLKLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY        +++EV +  DG       + V+      +  +++ Y ++L+  
Sbjct: 153 YTKEMPVWYCPDLGTVLSNEEVIQTPDGPRSERGFHKVKRKPLRQWILKITEYAERLIKD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEEIDWPESVKEMQKNWI 230



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 67/480 (13%), Positives = 154/480 (32%), Gaps = 103/480 (21%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ--NSRNFRDMADVLDISYDDFIRTTEK 100
                      H  +  + A+   +  K  V Q  N+           IS    I T E+
Sbjct: 338 YGTGAVMSVPAHDARDFEFAKKYNLPIKQVVSQTGNNEILTQPFTENGIS----INTPEE 393

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++     + +++       K           +  ++    +        +   N +   
Sbjct: 394 FNNLKTDEIKERVIKWLTENKKGQKKVNYKLRDWIFSRQRYWGEPIPIILDDDLNEIPLE 453

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E+E         +   +  Y+       P+ R  + ++  ++G      +     W    
Sbjct: 454 EDE------LPLRLPEIENYKPSGTGESPLSRIQDWVNIKRNGKTYKRETNTMPQWA--- 504

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
                            YL      +     K  +W P DL++ G +    H +Y   + 
Sbjct: 505 ---------GSCWYYIRYLDPNNDNEFASKEKINYWMPVDLYIGGAEHSVLHLLYARFWH 555

Query: 280 --------LSANLPLPK-----KVFSHGFILHKGE------------------------- 301
                   ++   P  K      + S  +    G                          
Sbjct: 556 KVLYDLGYVNTKEPFKKLINQGMITSFAYQDENGILIPNDEVEKKDNKFFSKKNNKELKQ 615

Query: 302 ---KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL N+I+P ++I+E G D++R + +          ++  GL          GI
Sbjct: 616 IVAKMSKSLKNIINPDDIIKEYGADSMRIYEMFMGPLTDSKPWNTQGLI---------GI 666

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              +++  ++  K+             + + I+S   + ++++ E+++N   + A++ ++
Sbjct: 667 FRFLNKIWTIKNKEL--------TKESASKEIISELHKTIKKVTEDIENLNFNTAISSLM 718

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             ++E            L K + +         +E+ + L I+L  F P L  ++++ + 
Sbjct: 719 IFINE------------LLKHDKNY--------LEIFKPLTIILSPFAPHLGEELWEYMG 758


>gi|317490445|ref|ZP_07948927.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910438|gb|EFV32065.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 948

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/454 (16%), Positives = 147/454 (32%), Gaps = 25/454 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV---FVDQNSRNFRDMADVLDI--SY 91
           +      DV      D++G    +A   AG+        + +  R    +    +I  SY
Sbjct: 350 YLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDVDEANPVIIEWLRERGTLVAQKEILHSY 409

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               R  E          +  +           +    +     +  + +      +   
Sbjct: 410 PHCWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIPAWASNRIGSMVADRPDW 469

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  W       F+ +     + +         L   R      F +   + L    
Sbjct: 470 CISRQRSWGVP-IPVFKCAKCGSTVANEQTFDAVIDL-FYREGADAWFTREPSEYLPRGV 527

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G       + I+ VW ++  ++ +          ++   +PAD+++ G D     
Sbjct: 528 KCETCGCTELTPEKDILDVWWESGVSHTSVLK----HREAEGLRFPADMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +       P    +     +  +G K+SKSLGN +DP EV+ + G D LR ++
Sbjct: 584 FQSSLLTSMGAYGVPPYKAVMHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSGADVLRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
                  +D     + L++   ++    I N   R +   L D+D          A    
Sbjct: 644 ASVDYS-QDVSISDEILQR--TSEAYRRIRNTF-RFLLGSLDDFDDQKDAVSDWNALEPL 699

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR-YFDAQKPWELKKTNPD-- 442
           D+  +     +L ++         H     V   +V+++   Y DA K   L    PD  
Sbjct: 700 DQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKD-RLYSEAPDSP 758

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R   V  V + ++  L  +L   +    +++++ 
Sbjct: 759 RRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEH 792



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 47  KDGKPFILHDGPPYANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHM 106

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
            +      K               + ++     R+    L ++ D      T    +   
Sbjct: 107 VEKTLGPDKMAKIDQPTLRRLCREWAEKYVDVQREGFKRLGVNADWEHPYLTFTPNYEAG 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              ++K++   G +Y+G     +  R      + E+  
Sbjct: 167 NVEVFKQMYLDGLVYRGRKPIHWCKRCHTALAEAEIEY 204


>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|163841986|ref|YP_001626391.1| valyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162955462|gb|ABY24977.1| valyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 873

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 9/257 (3%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           DP  ++  W  +        G+  +     +  +P DL   G DI+     +    A  L
Sbjct: 519 DPD-VLDTWATSSLTPQIVGGWSRDEK-LFSSVFPFDLRPQGHDIIRTWLFSSAVRADSL 576

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
            A  P      S   +    +K+SKS GNV+ P  V+ E G DA+RY+       G D  
Sbjct: 577 QATAPWHNAAISGWILDPDRKKMSKSKGNVVVPDAVLHEFGADAVRYW-AASAKLGADTA 635

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQ 399
           Y  +  + ++   LA  + N     +++   + + +       T   D+++L+  + V+ 
Sbjct: 636 Y--EIAQIKIGRRLAIKLLNASKFVLNLGATESNVVNSADPVLTNPLDKALLAQLADVVD 693

Query: 400 EIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +  +   +    +AL    S      D Y +  K            ++VL      +  L
Sbjct: 694 QATKAFDSYDYAKALQLTESFFWSFTDDYVELIKDRAYGAAGDAEKASVLAALATTLDAL 753

Query: 459 AILLQAFVPKLANKIFD 475
             L   F+P   ++++ 
Sbjct: 754 LRLFAPFLPFATDEVWS 770



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 10/123 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H+GH +     DV+ARF R+ G +V +  G D++G    +  QN  
Sbjct: 58  FSIDTPPPTASGSLHVGHMFSYTQTDVIARFQRMRGKNVFYPLGWDDNGLPTERRVQNFY 117

Query: 65  ----AGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEK---RHHDTCRILWKKISDK 116
                  T             ++  D + +S  +FI   E+           L+  +   
Sbjct: 118 GVRCNPATPYDPDFTPPAEPAKNDRDFIQVSRRNFIELCEELAVDDEKIFEDLFTTLGLS 177

Query: 117 GDI 119
            D 
Sbjct: 178 VDW 180


>gi|325831364|ref|ZP_08164618.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325486618|gb|EGC89066.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 948

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/454 (16%), Positives = 147/454 (32%), Gaps = 25/454 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV---FVDQNSRNFRDMADVLDI--SY 91
           +      DV      D++G    +A   AG+        + +  R    +    +I  SY
Sbjct: 350 YLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDVDEANPVIIEWLRERGTLVAQKEILHSY 409

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               R  E          +  +           +    +     +  + +      +   
Sbjct: 410 PHCWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIPAWASNRIGSMVADRPDW 469

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  W       F+ +     + +         L   R      F +   + L    
Sbjct: 470 CISRQRSWGVP-IPVFKCAKCGSTVANEQTFDAVIDL-FYREGADAWFTREPSEYLPRGV 527

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G       + I+ VW ++  ++ +          ++   +PAD+++ G D     
Sbjct: 528 KCETCGCTELTPEKDILDVWWESGVSHTSVLK----HREAEGLRFPADMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +       P    +     +  +G K+SKSLGN +DP EV+ + G D LR ++
Sbjct: 584 FQSSLLTSMGAYGVPPYKAVMHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSGADVLRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTES 386
                  +D     + L++   ++    I N   R +   L D+D          A    
Sbjct: 644 ASVDYS-QDVSISDEILQR--TSEAYRRIRNTF-RFLLGSLDDFDDQKDAVSDWNALEPL 699

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDR-YFDAQKPWELKKTNPD-- 442
           D+  +     +L ++         H     V   +V+++   Y DA K   L    PD  
Sbjct: 700 DQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKD-RLYSEAPDSP 758

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           R   V  V + ++  L  +L   +    +++++ 
Sbjct: 759 RRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEH 792



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 47  KDGKPFILHDGPPYANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHM 106

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
            +      K               + ++     R+    L ++ D      T    +   
Sbjct: 107 VEKTLGPDKMAKIDQPTLRRLCREWAEKYVDVQREGFKRLGVNADWEHPYLTFTPNYEAG 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              ++K++   G +Y+G     +  R      + E+  
Sbjct: 167 NVEVFKQMYLDGSVYRGRKPIHWCKRCHTALAEAEIEY 204


>gi|320587278|gb|EFW99758.1| valyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 1065

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 124/369 (33%), Gaps = 54/369 (14%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILP-IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +      +       Y  H     P     + +    KS  +  + + K F       + 
Sbjct: 519 WCISRQLWWGHQCPVYLVHFAGAEPSDGADSRLWFAAKSEAEARAKAEKAFPGRDFTLER 578

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
            + ++  W  +     +T G+         K +P  L   G DIL F    +   +  L+
Sbjct: 579 DEDVLDTWFSSGLWPFSTLGWPQQTA-DFEKLFPTSLLETGWDILFFWIARMVMLSLKLT 637

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI----------------------- 317
             +P   +V+ H  +    G K+SKSLGNVI+P++VI                       
Sbjct: 638 GKVPFY-EVYCHPLVRDSDGRKMSKSLGNVINPLDVISGISLEGLQATLLKGNLDPLEVT 696

Query: 318 --------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                          E G D LR  L   +  G D  +D             N I N  S
Sbjct: 697 KATKYQKTAFPNGIPECGADGLRLCLANYVTGGGDINFDIK--VMHAYRRFCNKIWN-AS 753

Query: 364 RSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           + V   L  +DG +P       GA +  +  IL+  +   +EI   +  +    +   + 
Sbjct: 754 KFVLGNLAQHDGFVPRASRTLGGAESLPELWILAKMNAAAREINAALDEREFKNSSNALY 813

Query: 419 SLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D + +  K   + + +P +  + L      +    +L   F+P +  +++  
Sbjct: 814 NFWYAELCDVFIENSKT-IIAEGSPAQRESALQTLYSALETALLLSHPFLPFITEELWQR 872

Query: 477 LFVADENRC 485
           L    ++  
Sbjct: 873 LPRRPQDET 881



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 19/135 (14%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  I+          H+GHA    + D++ R +R+ G   L+  G D  G       +  
Sbjct: 137 RFVIAHPPPNVTGSLHMGHALGDSLQDIMIRHNRMRGKTTLWLPGCDHAGIATQSVVETM 196

Query: 66  GV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                              T   +  +   N  +    +  S+D      T ++      
Sbjct: 197 LYRREGKTRHDLGREAFVKTVWEWKTEYHANINNALRRMGGSFDWTREAFTMDENLSAAV 256

Query: 107 RILWKKISDKGDIYK 121
           +  + ++ D+G I++
Sbjct: 257 QETFVRLHDEGTIFR 271


>gi|293373258|ref|ZP_06619618.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631781|gb|EFF50399.1| isoleucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 1162

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQIHYPFENKELLDNRQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+++                ++   +  ++            E D  ILS
Sbjct: 743 PWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 803 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 861 QTLYTCLETVAKLMAPVSPFYADRLYTDLITA 892



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TT 98
           +  + + A   TK  + +       N+   +D+        D   R            T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHRMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMTEWGTPYFIAWTTTPW 239


>gi|260174881|ref|ZP_05761293.1| isoleucyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315923124|ref|ZP_07919364.1| isoleucyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313696999|gb|EFS33834.1| isoleucyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 1162

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQIHYPFENKELLDNRQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+++                ++   +  ++            E D  ILS
Sbjct: 743 PWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 803 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 861 QTLYTCLETVAKLMAPVSPFYADRLYTDLITA 892



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TT 98
           +  + + A   TK  + +       N+   +D+        D   R            T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHRMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMTEWGTPYFIAWTTTPW 239


>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782366|sp|B7HLM9|SYI_BACC7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782367|sp|B9IVX2|SYI_BACCQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HSGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409428|sp|Q732H4|SYI1_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|212709129|ref|ZP_03317257.1| hypothetical protein PROVALCAL_00162 [Providencia alcalifaciens DSM
           30120]
 gi|212688041|gb|EEB47569.1| hypothetical protein PROVALCAL_00162 [Providencia alcalifaciens DSM
           30120]
          Length = 936

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/402 (15%), Positives = 130/402 (32%), Gaps = 48/402 (11%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDE-AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGY 165
           K +          Y   +  +    +    + + G D      Q     + VQW+   G 
Sbjct: 389 KGLLMYKKAISHSYPCCWRHKTPVIFRATPQWFIGMDKNGLREQSLKEIDIVQWIPGWGR 448

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               S  +++          +  P+     +  E +      L +    R   D GI+  
Sbjct: 449 ARIESMVENRPDWCISRQRTWGTPMSLFVHKDTEELHPRTLELMEEVAKRVEVD-GIQAW 507

Query: 222 DDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            D                    + VW D+ + +           G+      AD+++ G 
Sbjct: 508 WDLDPADLLGADADTYRKVPDTLDVWFDSGSTHFAVVDARPEFHGNS-----ADMYLEGS 562

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +  +    P  + +     +  +G K+SKSLGN + P +V+ ++G D
Sbjct: 563 DQHRGWFMSSLMLSTSMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLGAD 622

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----- 378
            LR ++      G+    D+  + KR     A      +  +   +L + +G  P     
Sbjct: 623 ILRLWVASTDYTGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPETDMV 675

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
            P      D   +       +EI +          + +++   S      Y D  K  + 
Sbjct: 676 KPEDMVVLDRWAVGRALEAQKEITKAYDEYDFLGVIQRLMHFCSIEMGSFYLDIIKDRQY 735

Query: 437 -KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K++     +       ++  L   +   +   +++I++ L
Sbjct: 736 TAKSDSLARRSCQTALFHIVEALVRWIAPVLSFTSDEIWNEL 777



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 60/206 (29%), Gaps = 16/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLAGFDSPYIPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQIVGKPGEKVSAAEFRAKCREYAKEQIEGQKADFMRLGVLGEWDKPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K    G + KG     +     +   + EV              P    +     
Sbjct: 166 IRALAKTIANGHLVKGAKPVHWCTACGSSLAEAEVEYYDKTSPSIYVRFPAVDSKAVCEK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S+ +   L    +   + LP  R
Sbjct: 226 FGVSSDKVPSL-VIWTTTPWTLPANR 250


>gi|160884555|ref|ZP_02065558.1| hypothetical protein BACOVA_02540 [Bacteroides ovatus ATCC 8483]
 gi|156110294|gb|EDO12039.1| hypothetical protein BACOVA_02540 [Bacteroides ovatus ATCC 8483]
          Length = 1162

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQIHYPFENKELLDNRQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+++                ++   +  ++            E D  ILS
Sbjct: 743 PWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 803 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 861 QTLYTCLETVAKLMAPVSPFYADRLYTDLITA 892



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TT 98
           +  + + A   TK  + +       N+   +D+        D   R            T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHRMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMTEWGTPYFIAWTTTPW 239


>gi|312880110|ref|ZP_07739910.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783401|gb|EFQ23799.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 931

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 121/398 (30%), Gaps = 81/398 (20%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +      PV +     +F  +  ++D+ L   E   +++       + I  +    
Sbjct: 399 HSYPHCWRCKKPVIFRATAQWFVSVQQFRDQALKAIEEQVQWV--PVWGQDRIGNMVRDR 456

Query: 205 KDLSLSRKTFDWGIKIPD-----------DPQYI-------------------------- 227
            D  +SR+   WG+ IP            DP+ I                          
Sbjct: 457 SDWCISRQRV-WGVPIPAFYCRDCGKLVLDPEKIRRVAKRVKEQGSDIWWQESPEALLGD 515

Query: 228 ------------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                             M VW D+  ++L                WPADL++ G D   
Sbjct: 516 LAVCPHCASRNLRKDTDIMDVWFDSGVSHLAVLETRP------ELSWPADLYLEGSDQHR 569

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F      +     + P    +     +  +G K+SKSLGNV  P EVI+  G D LR 
Sbjct: 570 GWFQTSLLTSVATRGSAPFRTVLTHGFIVDGEGRKMSKSLGNVTRPQEVIDRYGADILRL 629

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GA 382
           ++        D    +  LK     +L       +  +   +L + +G  P       G 
Sbjct: 630 WVASTDY-RGDVRISETILK-----NLVETYRR-IRNTARFLLGNLEGFDPQKHRVSRGD 682

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN 440
               D  +L+    +++ + +  ++   H                 + D  K        
Sbjct: 683 MEPLDLWLLARLQDLVERVTKGYEDYEFHVPSFLTHQFCDNEMSSFFLDVSKDRLYADQK 742

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 +   V  E +  L  LL   +   A +I+  L
Sbjct: 743 GGLSRRSAQTVLWETLTTLCRLLAPVLSFTAEEIWQNL 780



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 15/177 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      +     Y NA  HIG A+  I+ D + ++  + G    +  G D HG  I   
Sbjct: 47  EGSPTFVLHDGPPYANANIHIGTAFNKILKDFIPKYKAMRGFRAPYVPGWDTHGLPIELK 106

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                   K              +  Q     R+    L +   +++   T    +    
Sbjct: 107 VLKEQGLDKDNVDPVELRRRCTSYAHQFIDIQREEFRRLGVLGDWENPYLTLRPEYEAAQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              +  + +KG +YKG    ++    +      E+    +         P+  +E+ 
Sbjct: 167 LGAFADMVEKGLVYKGQKPVFWCTDCQTALAAAEIEYEDESSPSIYVAYPLPEVEKR 223


>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604270|ref|YP_002868131.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583658|sp|Q81WE4|SYI1_BACAN RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782360|sp|C3P665|SYI_BACAA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782361|sp|C3L730|SYI_BACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEY 200


>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 913

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 500 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|281420248|ref|ZP_06251247.1| isoleucine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405743|gb|EFB36423.1| isoleucine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 1203

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 111/293 (37%), Gaps = 30/293 (10%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--------------------KFWPA 258
           K       ++ VW D+ +       Y    + ++                     KF+PA
Sbjct: 654 KPMYRESDLIDVWFDSGSMPYAQLHYPFEGEMARGTEADRDALIHSTYEGYAIPPKFYPA 713

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D    G D     F  ++  A ++  ++     + S   +  KG K+SK +GNV +P E+
Sbjct: 714 DFINEGVDQTRGWFFTLHAIATMVFDSVAFKNVISSGLVLDAKGNKMSKHVGNVTNPFEM 773

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I++ G D +R++++       +  +D +G+ +                ++   +  +D  
Sbjct: 774 IDKYGADPVRFYMMTNSEPWDNLKFDPNGVDETRRKFFGTLYNTYSFFALYANVDGFDAE 833

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDA 430
                     E D  ILS  + +++ +   +      RA   + + V++   + Y   + 
Sbjct: 834 AAQVPFEKRPEIDRWILSSLNTLIKGVDRELAGYDPTRAGRLIDAFVNDDLSNWYVRLNR 893

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++ W   K   +   +        +  +A LL +F P  A++++  L    E+
Sbjct: 894 KRFW--GKEMSEDKLSAYQTLYTCLMTVAKLLASFAPFYADELYHDLGGELES 944



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 96/353 (27%), Gaps = 44/353 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMKGFQVHRKAGWDTHGLPVELGVEK 100

Query: 65  A----------------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
                                      +  V + +  +R++ + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASEKYISTEDYNHKCRENVMKFTAEWRELTEKMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
           ++ +T   L K++ +KG +YKG     YS       +  E+ +           +     
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPGAGTGLSSHELNQ------PGCYRDVKDLT 214

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
               +  +    +               P    + V   V   +  +++       G  +
Sbjct: 215 TTAQFLIKDPKAEWTKWGKPYFIAWTTTPWTLPSNVALCVGPKIDYVAIETYNLYNGEPM 274

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA-------- 272
                  +                L      K   W    H+ G D+   H         
Sbjct: 275 TLVMAEALVGSYLKADQECKEGDLLPFDKEKKQCPWRIIDHMKGTDLEGMHYEQLLPWVK 334

Query: 273 ------IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
                 ++ PAF+       P+KVF+      +  ++      VI    V  +
Sbjct: 335 PCEKVDLFAPAFVTEYAAAHPEKVFASEDGRDQFVEMDSEAFRVILGDYVTTD 387


>gi|239940561|ref|ZP_04692498.1| isoleucyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239987045|ref|ZP_04707709.1| isoleucyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291443996|ref|ZP_06583386.1| isoleucyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346943|gb|EFE73847.1| isoleucyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 1058

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/412 (14%), Positives = 137/412 (33%), Gaps = 14/412 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +       +G++ +  +N V W  
Sbjct: 406 PHCWRCHTALLYYAQPSWYIRTTAIKDRLLEENEKTNWFPDSVKNGRFGDWLNNNVDWAL 465

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         +D  L+   S  E      R    +   +  + +++ +    +  
Sbjct: 466 SRNRYWGTPLPIWRCEDNHLTCVGSRAELSELTGRDQSSLDPHRPFIDEITFTCTHENCQ 525

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 526 LEAYRVPE-VIDAWYDSGSMPFAQWGYPYKNKEIFESRYPAQFISEAIDQTRGWFYTMMA 584

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 585 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 644

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++      +      P     T  D  +LS 
Sbjct: 645 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSAADPAPADRTVLDRWLLSE 704

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++ ++   M+     RA   + + V ++  ++  +      + +     T      E
Sbjct: 705 LNALVDQMTVAMEGYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 760

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           V+  +  L+    P +  +++  L         +S+     P   +    DP
Sbjct: 761 VVETVTRLMAPLTPFITERVWQDLIAPVTPDAPESVHLASWPKAEVSA-IDP 811



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMQGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAFGIAEFNAKCRDSVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I +K  + +      +  R     +D E+ +G +
Sbjct: 160 VDSVWWSLKEIFNKDLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|297684796|ref|XP_002820009.1| PREDICTED: LOW QUALITY PROTEIN: isoleucyl-tRNA synthetase,
           cytoplasmic-like [Pongo abelii]
          Length = 1424

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/464 (14%), Positives = 145/464 (31%), Gaps = 34/464 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 511 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 563

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY----YNAQHNPVQ 158
                 ++K +       +          D  Y+  + V +   G +     +   +  +
Sbjct: 564 RSDTPLIYKAVPSWFVRVENMVGQLLRNNDLCYWVPELVREKRFGNWLKDACDWTISRNR 623

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +       +    +++ +     +  E +   +  +     V          + +     
Sbjct: 624 YWGTPIPLWVSDDFEEVVCVGSVAELEELSGAKISDLHRESVDHLTIPSRCGKGSLHRIS 683

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +       +   W ++ +       Y           +PAD    G D     F+ +   
Sbjct: 684 E-------VFDCWFESGSMPYAQVHYPFXNKREFEDAFPADFIAEGIDQTRGWFYTLLVL 736

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A  L    P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+      
Sbjct: 737 ATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVR 796

Query: 337 -KDGFYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DE 388
            ++  + ++G++  +   L    N    L+   + +  ++    +       ES    D 
Sbjct: 797 AENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDR 856

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTV 447
            ILS    ++      M    ++  + +++  V    + Y    +     +   +     
Sbjct: 857 WILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMA 916

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           L     V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 917 LETLFSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 960



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 154 KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 213

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 214 IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 273

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 274 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 317


>gi|283783805|ref|YP_003363670.1| isoleucyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947259|emb|CBG86804.1| isoleucyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 938

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 121/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMALFVHKDTEELHPRAVELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDPKAILGDEADQYVKVPDTLDVWFDSGSTHASVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  ++   H  + +++   S      Y
Sbjct: 668 GFDPVKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEDYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQSALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 787



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|119873138|ref|YP_931145.1| isoleucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674546|gb|ABL88802.1| Isoleucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 977

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 10/277 (3%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                Y++ VW+D+   ++      +      +K +P D    G D     F+++   A 
Sbjct: 519 WVREPYVIDVWLDSGVAWIAAVD-GERNRELWSKLFPYDFVTEGIDQTRGWFYSLLASAM 577

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P    +     +   G+K+SKS GNVI   ++ E+ G D +R +++ + A  +D
Sbjct: 578 VYIGRAPYKTVLIQGLILDKYGQKMSKSRGNVIWAKDLFEKYGADPVRLYILLKAAPWED 637

Query: 339 GFYDKDGLK-KRVNADLANGIGNLVSRSVS---MILKDYDGMIPTPGAFTESDESILSVC 394
             +D D +K    N ++   I       +S      + Y        A  E D  +LS  
Sbjct: 638 LAFDPDEVKMAISNLNILWNIVKFADMYMSLDGFSAEKYPLEEWIDKALDE-DRWLLSEL 696

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVLYVTV 452
           ++++++  + ++N   H+A       + E    RY    +     +           V  
Sbjct: 697 NKLIEDFTQYIRNFEFHKAANLWRDFIVETLSHRYIRLLRRRVWTEEPSADKYAAYAVLH 756

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            V++ + IL    VP +   ++       E    +S+
Sbjct: 757 HVLKNVLILGSILVPFITEYLWQTYVKKFERETAESV 793



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 51/160 (31%), Gaps = 20/160 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
                     N  PH+GH       DV+ RF+RL G DV    G D  G  +    +   
Sbjct: 43  FAFLEGPPTTNGMPHVGHIRGRTYKDVVLRFYRLLGYDVWPQGGWDMQGMPVEWEVEKRL 102

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY------------------DDFIRTTEKRHHDTC 106
              + K         F    + L   Y                  D+   T    + +  
Sbjct: 103 KLKSKKEVELYGLEQFAKECNKLVDEYLAYWREWGTRRLGLWLDIDNAYETRRPAYIEYV 162

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             + K+  ++G + +     W+  R E   +D EV  G +
Sbjct: 163 WRVIKRAYERGLLVEDYRVLWFCPRCETSLSDHEVALGYE 202


>gi|161751096|ref|NP_376312.2| isoleucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|84029571|sp|Q975H9|SYI_SULTO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1047

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 19/278 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW D+   +  + G        +    P DL + G D L   F ++     +L    
Sbjct: 519 VADVWFDSGVAFFASLGKDWEKKWKEIG--PVDLVLEGHDQLRGWFFSLLRAGVILLDRA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEV--IEEVGVDALRYFLVREIACGKDGFYD 342
           P    +     +  +G ++ KSLGN ++P +V   E+ G D LR +L+R     +D  + 
Sbjct: 577 PYNAVLVHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGRDVLRLWLLRNTT-WEDAKFS 635

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L +    DL       V  S  M L ++D  I       +     D  +LS  +RV+
Sbjct: 636 WKALDQTK-RDLNIIWNVYVFASTYMNLDNFDPRIYNLDNLKQYLRIEDLWLLSRYNRVV 694

Query: 399 QEIRENMQNQLIHRALAQVISLV-SEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +E++E+M +  +H    ++ S +  ++ R++     ++ W  +  +PD+ + + YV  EV
Sbjct: 695 KEVKESMNDFKVHELANKMTSFIIDDISRFYLRLVRKRAWN-ESNDPDKIA-MYYVLYEV 752

Query: 455 IRQLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQ 491
           ++   +LL   +P    +I+    V   ++   +SL +
Sbjct: 753 LKGSLVLLSPVIPFTTERIYQDFVVDKKDSVSMESLPE 790



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 21/158 (13%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K        YP++  PHIG  +  +I D + R+ RL G       G D HG  I  A +
Sbjct: 36  KKFLFIDGPPYPSSPIPHIGTVWNKVIKDCILRYERLAGFRTYDQPGYDTHGLPIEVAIE 95

Query: 64  NA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
                                   K F   N+ +       + I   +++   T    + 
Sbjct: 96  KQLGIQKKSDIIEKIGVDNFVNKCKEFALNNASSLTANFKNIGIFMDWNNPYMTLHNDYI 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               +L KK  ++G +YKG +   +  R E    D EV
Sbjct: 156 SNSWMLIKKAYERGLLYKGVHVLHWCPRCETTLADYEV 193


>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|81395073|sp|Q6HER9|SYI1_BACHK RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|299145883|ref|ZP_07038951.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298516374|gb|EFI40255.1| isoleucine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 1162

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 623 KPMKRESDLIDVWFDSGAMPYAQIHYPFENKELLDNRQVYPADFIAEGVDQTRGWFFTLH 682

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +
Sbjct: 683 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSS 742

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+++                ++   +  ++            E D  ILS
Sbjct: 743 PWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILS 802

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 803 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 860

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 861 QTLYTCLETVAKLMAPVSPFYADRLYTDLITA 892



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFVDQ-------NSRNFRDMADVLDISYDDFIR------------TT 98
           +  + + A   TK  + +       N+   +D+        D   R            T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHRMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMTEWGTPYFIAWTTTPW 239


>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|262196375|ref|YP_003267584.1| valyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262079722|gb|ACY15691.1| valyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 959

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/410 (15%), Positives = 129/410 (31%), Gaps = 57/410 (13%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           G +          +     E  ++   +         +      +P     E    + S 
Sbjct: 397 GWERTRAEDSGIELHPPRMEKIYYHWLSNIRDWCISRQIWWGHRIPAWYHRESGEVIVSF 456

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
            +   +  +   W          ++  W  +    ++T G+ +       +++P  +   
Sbjct: 457 DEPEQVKAEPEAW-----RQDDDVLDTWFSSWLWPMSTLGWPEKTP-DFERYYPTSVLST 510

Query: 264 GKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----- 316
            KDI+ F    + +        LP     F       +G  +SKS GN IDP+ V     
Sbjct: 511 AKDIIFFWVARMNFAGLYFEKRLPYQHVYFHSTIADDRGVTMSKSKGNGIDPLSVIDGAS 570

Query: 317 ------------------------------IEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                                          E VG D +R+ LV  I  G+      D  
Sbjct: 571 AQDLKRPVEEARPENMKELLKRIDKNFAKGFEGVGADGMRWTLVYSITEGEHVRLSLDRF 630

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDG-----MIPTPGAFTESDESILSVCSRVLQEI 401
            +    +    + N   R ++ +  + +        P P   T+ D  +L+    V++++
Sbjct: 631 TE--GRNFVTKLWNASGRIITSLEAEQERGDAAQPAPAPATETDEDRWLLARLDHVIRDV 688

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           R ++           +   V +       +  K   L   +       L V    +  + 
Sbjct: 689 RRSLDGFDFGAMAQTLYHFVWDDFASWALELSKT-RLMSDDAGARRGALRVMGSALADIL 747

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
            LL   VP +  +++  L  A        LD+  +PG +L +  +P FP+
Sbjct: 748 RLLHPVVPFVTEELWARLRPAMSALGL-WLDEGAEPGELLCR--EP-FPK 793



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I         + H+GHA    + D L R+ R+DG D L+  GTD  G       
Sbjct: 46  DAEPFVIVIPPPNITGRLHMGHALNDTVQDALTRYKRMDGFDALWVPGTDHAGIATQSVV 105

Query: 63  QNAGVT--------------TKVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +                    +++  +           R +    D S   F  T ++  
Sbjct: 106 KKHLDAQGVDYQELGREGMVERIWAWREQFGGAIIEQLRRIGCSCDWSRTRF--TMDEGL 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +   R  + ++ + G IY+G     +   D+   +DDEV
Sbjct: 164 NQAVRHAFVRLYEDGLIYRGKRIVNWCPVDKTALSDDEV 202


>gi|193794326|gb|ACF21375.1| methionyl-tRNA synthetase [Actinomyces oris]
 gi|193794448|gb|ACF21436.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +E    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLERYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELQDIDRTLLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|241720802|ref|XP_002413624.1| isoleucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215507440|gb|EEC16932.1| isoleucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 1161

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 519 VFDCWFESGSMPYAQAHYPFENKKEFEACFPADFIAEGVDQTRGWFYTMLVLSTALFGKP 578

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP EV+ + G DALR +L+       ++  + +
Sbjct: 579 PFKNLIANGLVLASDGQKMSKRKKNYPDPTEVVHKYGADALRLYLINSPVVRAENLRFRE 638

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           +G++  +        N    LV   V    +  +  +        S    D  ILS    
Sbjct: 639 EGVRDILKDVFLPWYNAYRFLVQNIVLFEKEHGEKFLCAASIKGASSNFMDRWILSYTQS 698

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  +++ M+   ++  + +++  V  + + Y    +     +   +     L     ++
Sbjct: 699 LVLFVKKEMKEYRLYTVVPRLVKFVDHLTNWYVRMNRRRLKGENGKEDCQHSLETLCSIL 758

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  L+  F P L   ++  L
Sbjct: 759 YIMIRLMAPFTPFLTELMYQTL 780



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 35  KSRPRFSFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVERRFGWDCHGLPVEYE 94

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     +  V + S  +  +   +   I + +  +T     
Sbjct: 95  IDKTLGIKGPDDVKKLGIENYNAECRKIVMRYSSEWEMIVTRMGRWIDFRNDYKTMYPWF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            +T   ++K++ +KG +YKG     YS       ++ E
Sbjct: 155 METVWYIFKQLYNKGLVYKGVKVMPYSTACNTPLSNFE 192


>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 923

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 450 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 509

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 510 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 564 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 622

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 623 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 677 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 737 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 789



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 47  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 106

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 107 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 167 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 216


>gi|218675402|ref|ZP_03525071.1| methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 501

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 95/512 (18%), Positives = 164/512 (32%), Gaps = 67/512 (13%)

Query: 28  MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
            ++ADV  R+HR+ G      TG DEHG      A+  G         +          +
Sbjct: 2   YLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKARKLGRPVDDVAHMHIEEILQCLRSV 61

Query: 88  DISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD-------E 140
           DI  D F+RT+ + H D    ++ ++   G +        Y    E +  D         
Sbjct: 62  DIEPDVFVRTSSEDHKDRSLAIYDQLRASGYVELRDGEQLYCGTCEEFAADSLAVGECPA 121

Query: 141 VYKGADGQYYNAQ---------HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF----- 186
                D                 NP+     +    R        L  +    +      
Sbjct: 122 CNAPTDSNLCEDCGSALQHNLLRNPIHTTCGQSLILRPIRQVHFQLEKFAPGLDHAIEAS 181

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ---YIMYVWIDALTNYLTTTG 243
             P   + + + +++S L  L +SR  FD G+ +    +     +  W + L  Y T   
Sbjct: 182 GWPESIKRKELDWLRSKLMALPMSRH-FDRGVTLNSPVEVAGQTLMTWFEGLWCYETGIE 240

Query: 244 YLDNPDGSKAKFWPAD-----LHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH 298
            L   +G+       +     +  +G+D   ++ I   A L S    +P       F   
Sbjct: 241 RLCKQNGADLDDTMRNASTRLVFFMGQDNRFYYTIGVTASLFSRGYAIPYNHAIQDFYKL 300

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG--KDGFYDKDGLKKRVNADLAN 356
           +G K S S  + +   EV  ++  + LRY+L          D  +  +GL +        
Sbjct: 301 EGAKFSTSRDHAVWADEVAADIDTNVLRYYLASIAKPFGANDNDFLIEGLLQTAARI--- 357

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  R+    L+ Y G   T  A   + E      +  ++   E +Q+  +  A+  
Sbjct: 358 -------RAFETALRKYAGCNETLTADKLTVEQ-----NHNVKRYSEAVQDLRVWDAMDA 405

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           + +                       RA T   V+   +     LL    P LA +    
Sbjct: 406 IDAFFDVASF---------------SRADT--SVSAAEVSVFLSLLNPVTPMLAARYGAF 448

Query: 477 LFVADENRCFQSLDQRLKPGFMLHKTFD-PIF 507
            F A            ++P   L K  D P+F
Sbjct: 449 FFGAGWRPGLD--GGTIRPSTGLRKPVDFPLF 478


>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|254782364|sp|C1EPQ9|SYI_BACC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|309360628|emb|CAP30950.2| CBR-LARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 1083

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 80/241 (33%), Gaps = 19/241 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK YI +   YP+ + HIGH     I+D  AR++RL+G  V+   G D  G     AA+N
Sbjct: 63  EKKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYRVIHPIGWDSFGLPAENAARN 122

Query: 65  AGVTTKVFVDQNSRNFRDMADV----------------LDISYDDFIRTTEKRHHDTCRI 108
            GV  + +  QN    R                     +   ++  I T E   +   + 
Sbjct: 123 NGVDPREWTIQNIETMRRQLKATQLRNVLVAKCPIFRQIQFDWNREISTCEPEFYRWTQW 182

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           ++ ++ + G + +      +   D+     +++    +           +  +       
Sbjct: 183 IFCRLFENGLVRRTQAEVNWDPIDQTVLAAEQI---DNEGRSWRSGAVAEKKKLRKSTTN 239

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            +     ++   +        + + +E    V     +       F + + +       +
Sbjct: 240 YTNCSQWMIETPKYAKRLQEGLRKMSEQWGEVADIQANWIGKCDVFRFMLPVIGTENEFI 299

Query: 229 Y 229
            
Sbjct: 300 D 300



 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 14/124 (11%)

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRA 413
           N    L+ R  +M        + +     +   D  I    +  ++ +   ++   +H  
Sbjct: 844 NFFQKLLDRIATMTSDVIKSRVASSEFKKDPNIDSQIKETYNFFVRNVGMCLEVLHLHN- 902

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
              ++ L    +          LKK +P   +      +  +R L I+LQ F P +A ++
Sbjct: 903 -TALMRLQGFTN---------ALKKIDPVYLAN-SEEGIRAVRSLIIMLQVFCPHVAAEM 951

Query: 474 FDIL 477
           +  L
Sbjct: 952 WTAL 955


>gi|284931233|gb|ADC31171.1| valyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 860

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 141/386 (36%), Gaps = 51/386 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD- 215
           VQ +  + +F   + + D++     +  +  +  +R  + I+      +D  +SR+    
Sbjct: 360 VQPLLSKQWFLITTKFVDEIKKLVNNEDQIKIYPKRFLDTINNWLDHNQDWCISRQLVWG 419

Query: 216 -----WGIKIPDDP---------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                W  K   D                  ++  W  +    L                
Sbjct: 420 HQIPAWYHKDHPDEVIVSINSLGDDYYRDSDVLDTWFSSALWPLICFD-DGLDQKEFNAN 478

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P  L V   DI+ F    + + ++LL  ++P    +     +     K+SKSL N +DP
Sbjct: 479 FPNSLLVTAYDIVFFWVLRMIFMSWLLKKSIPFHDLLLHGLILDEHNRKMSKSLNNGVDP 538

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           I++I++ G DALR FL    + G+D  Y+ + +     A   N + NL        LK  
Sbjct: 539 IQIIDQYGADALRLFLTSNTSPGEDVSYNVEKINAA--ASFLNKLWNLARY-----LKLI 591

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
           D    T       D  I+   + V   I++ ++      +  Q+   + +   + Y +  
Sbjct: 592 DQSKLTDQPLDSLDHWIIHRFNEVNAGIQDKLKEYRFALSNKQLSDFIWDDFANVYIELN 651

Query: 432 K--PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           K   W   K           +  ++ R+  I+L   VP +  +I++    +D      S+
Sbjct: 652 KKAQWSKAK---------FELANDIFRKFLIMLHPSVPFITEQIYNTFEFSDSK---PSI 699

Query: 490 DQRLKPGFMLHKT----FDPIFPRFL 511
                PG +  +     FD IF   +
Sbjct: 700 ILEKWPGLIKIENALDHFDQIFNLII 725



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 18/145 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           HIGHA+ + I D++ R+ +L    + +  GTD  G       ++
Sbjct: 44  KPFSIIMPPPNLTGILHIGHAWNLSIQDLIVRYQKLVMGKINWIPGTDHAGIATQTKFES 103

Query: 65  AGVTTK----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
              T K                 +  ++S+  ++ A  L ++  +     T  +  +   
Sbjct: 104 IQRTKKIDYKKDDRTMHFNNIYQWSQKSSQTIKNQAKSLGLALNWKKEKFTLSQESNKYV 163

Query: 107 RILWKKISDKGDIYKGCYSGWYSLR 131
             ++ K+  +G I K      +  +
Sbjct: 164 LDVFVKLYQQGYIVKKYTLVNWDTK 188


>gi|193794516|gb|ACF21470.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 4/164 (2%)

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L  G
Sbjct: 4   MEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGELVAG 63

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            GNLV+R+ SMI K +  + P P    + D ++L         + + +       AL + 
Sbjct: 64  WGNLVNRTASMIHKRFGQI-PEPAELEDIDRALLDAIEAGFTSVGDLIAQHRQKAALGEA 122

Query: 418 ISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
           + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 123 MRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|193216557|ref|YP_001999799.1| leucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001880|gb|ACF07095.1| leucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 804

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 3/209 (1%)

Query: 2   KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K YI     YP+    H+GH       D+++RF RL+G DVL   G D  G    +
Sbjct: 26  KHNKKAYILDMFPYPSGMGMHVGHLEGYTATDIVSRFKRLNGFDVLHPIGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGD 118
            A N G     F  +N  NFR     +  SYD    I TT+ + +   + ++K++   G 
Sbjct: 86  YALNTGNHPAPFTIKNIDNFRRQLKAMGFSYDYDKEINTTDPKFYYWTQWIFKELYKNGL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                    +         ++E+ +    +       PV       +  ++S Y DKLL 
Sbjct: 146 ASIEEVDVNWCEGLGTVLANEEIVEKNGIKVSERGSFPVVKKPMRQWVLKISNYADKLLE 205

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDL 207
             +S          +   I      +   
Sbjct: 206 GLDSLDWPESLKALQRNWIGKSNGHIVSW 234



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 44/344 (12%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  P+ + E    +           +  +       P+    E ++   +
Sbjct: 415 WIFSRQRYWGEPFPILFDENNDIYLVKELVSLPETNNIKPSGSTEGPLANIKEWMNVKVN 474

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G      S     W         Y+ Y+  ++   Y                  P DL++
Sbjct: 475 GKNFRRDSNVMPQWAGSSWY---YLAYILKNSDGTYAPLDSSEAKKRFENWL--PVDLYI 529

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++    H +Y   +         +    P  K +     +   G+K+SKSLGNVI+P 
Sbjct: 530 GGQEHAVLHLLYARFWHRFLFDIGIVPTKEPFTKLINQGLILGPDGQKMSKSLGNVINPD 589

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           ++I+  G DALR F +          ++   L       +   +  L S     +     
Sbjct: 590 DLIQTHGADALRIFEMFMGPLTDSKPWNTSSLDG-----IRKWLDRLYSNFNYFVKN--- 641

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                  + +E ++ + S  + +++E  + ++    + A+++++   +    Y    K  
Sbjct: 642 ----QKFSLSEKNDQLESNLNILIKEATDAIEKYKFNIAISKLMVFSN----YLGTLK-- 691

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            L  T P             ++  AI+   F P LA ++  ++ 
Sbjct: 692 VLPSTLP-------------LKNFAIIFSVFAPHLAEELLAMIN 722


>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|254782362|sp|B7JJY2|SYI_BACC0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HSGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|237718582|ref|ZP_04549063.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229452042|gb|EEO57833.1| isoleucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 1108

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 12/272 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       ++ VW D+         Y           + +PAD    G D     F  ++
Sbjct: 569 KPMKRESDLIDVWFDSGAMPYAQIHYPFENKELLDNRQVYPADFIAEGVDQTRGWFFTLH 628

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A ++  ++     + +   +   G K+SK L N +DP   IE+ G D LR++++   +
Sbjct: 629 AIATMVFDSVSYKAVISNGLVLDKNGNKMSKRLNNAVDPFTTIEKYGSDPLRWYMITNSS 688

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILS 392
              +  +D +G+++                ++   +  ++            E D  ILS
Sbjct: 689 PWDNLKFDVEGVEEVRRKFFGTLYNTYSFFALYANVDGFEYKEADVPMAERPEIDRWILS 748

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTVL 448
           V + +++E+          +A   +   V++   + Y   + ++ W           +  
Sbjct: 749 VLNTLIKEVDTCYNEYEPTKAGRLISDFVNDNLSNWYVRLNRKRFW--GGEFTQDKLSAY 806

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                 +  +A L+    P  A++++  L  A
Sbjct: 807 QTLYTCLETVAKLMAPVSPFYADRLYTDLITA 838



 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 20/181 (11%)

Query: 24  HAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ-------N 76
           H     I D+  R+  + G  V    G D HG  +  + + A   TK  + +       N
Sbjct: 6   HVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLPVELSVEKALGITKEDIGKKISVADYN 65

Query: 77  SRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRILWKKISDKGDIYKGCY 124
           +   +D+        D   R            T + R+ +T   L K++  KG +YKG  
Sbjct: 66  AACRKDVMKYTKEWEDLTHRMGYWVDMKHPYITYDNRYIETLWWLLKQLHKKGLLYKGYT 125

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
              YS       +  E+ +             V   + +     ++ +       + + P
Sbjct: 126 IQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVAQFKMKNPKPEMTEWGTPYFIAWTTTP 184

Query: 185 E 185
            
Sbjct: 185 W 185


>gi|295839441|ref|ZP_06826374.1| isoleucine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197698747|gb|EDY45680.1| isoleucine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 1048

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/416 (14%), Positives = 129/416 (31%), Gaps = 21/416 (5%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +        G++ +   N V W  
Sbjct: 396 PHCWRCHTALLYYAQPSWYIRTTAVRDRLLEENEKTNWHPENVKHGRFGDWLKNNVDW-- 453

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV---ISFVKSGLKDLSLSRKTFDWGI 218
                     Y    L  +      +  +    E+       +SGL           +  
Sbjct: 454 ----ALSRKRYWGTPLPVWRCPDGHLTCVGSLAELSGLTGTDQSGLDPHRPYIDAVTFAC 509

Query: 219 KIPDDP----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                     + ++  W D+ +      GY           +PA       D     F+ 
Sbjct: 510 PECGTEAKRVEEVIDAWYDSGSMPFAQWGYPYRNKELFEARYPAQFISEAIDQTRGWFYT 569

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +     L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+   
Sbjct: 570 LMAIGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAG 629

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESI 390
            +           +++ V   L      +  +++      +      P        D  +
Sbjct: 630 GSPWAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTAGWAPSAADPAPAERPVIDRWL 689

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           LS   ++   + E +++   HR    + + V ++  ++  +      + +     T    
Sbjct: 690 LSELHQLTAGVTEALESYDTHRTGQLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT---- 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
             EV+  +  L+   VP +  +++  L V  +    +S+     P   L    + +
Sbjct: 746 LHEVVETVTRLMAPLVPFVTERVWQDLVVPVDASAPESVHMASWPEADLAAVDEEL 801



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  R+  + G  V    G D HG  +  A
Sbjct: 41  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRYRTMRGYHVGRKAGWDCHGLPVELA 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  D   RT +  +
Sbjct: 101 VEKELGFAGKKDIEAYGIAEFNAKCRESVTRHTDAFTELTTRMGYWLDLDHAYRTMDPEY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG + +      +  +DE   +D E+ +G +
Sbjct: 161 VESVWWSLKQIFDKGLLVEDYRVAPWCPKDETGLSDHELAQGYE 204


>gi|312220686|emb|CBY00627.1| similar to isoleucyl-tRNA synthetase , cytoplasmic [Leptosphaeria
           maculans]
          Length = 983

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 97/272 (35%), Gaps = 11/272 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G  +      +   W ++ +    +  Y           +P D    G D     F+ + 
Sbjct: 416 GKGVLKRTNEVFDCWFESGSMPYASAHYPFENKEQFENSFPGDFIAEGLDQTRGWFYTLT 475

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L   LP    V +   +   G+K+SK L N  DP  ++   G DALR +L+    
Sbjct: 476 VLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPSLIMNSYGSDALRLYLINSPV 535

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRS---VSMILK--DYDGMIPTPGAFTES--- 386
              +    K+   K + + +   + N        VS++ K  D D         T S   
Sbjct: 536 VRAETLRFKEAGVKEIVSKVLLPLWNSYQFFDQQVSLLKKVADLDFTFDPAAGKTNSNVL 595

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAS 445
           D  IL+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   +   
Sbjct: 596 DRWILASCQSLLKFVNEEMGAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGEDGLEDTK 655

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             L    EV+  L   L  F P +   I+  L
Sbjct: 656 HALNTLFEVLYTLCRGLAPFTPFITENIYLRL 687


>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 921

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 134/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|237809689|ref|YP_002894129.1| isoleucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501950|gb|ACQ94543.1| isoleucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 938

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 120/346 (34%), Gaps = 33/346 (9%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           V+W+ E G     +  +++          + +PI      E  +     L+ +    K  
Sbjct: 442 VRWIPEWGQNRIEAMVENRPDWCISRQRTWGVPIALFVHKETQALHPRALELMEEVAKRV 501

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +        +G       
Sbjct: 502 EAKGIQAWWDLDPAELLGAEAADYEKVPDTLDVWFDSGSTHASVVDVRPEFNGHA----- 556

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +       +    P  + +     +   G K+SKSLGNV+ P +
Sbjct: 557 ADMYLEGSDQHRGWFMSSLMIGVAMKHQAPYRQVLTHGFTVDGHGRKMSKSLGNVVSPQD 616

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYD 374
           V+ ++G D LR ++      G+    D+     + +AD    I N     ++ +   + +
Sbjct: 617 VMNKLGADILRLWVASTDYTGEMTVSDE---ILKRSADAYRRIRNTARFFLANLNGFNPE 673

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
             +  P      D   +S    V +EI     N   H    +++   S      Y D  K
Sbjct: 674 TDMVQPEEMVVLDRWAVSRAKAVQEEIIAAYDNYDFHIVTQKLMQFCSVEMGSFYLDIIK 733

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   K +     +       ++  +   L   +   A +I+ +L
Sbjct: 734 DRQYTAKADSIARRSCQTALFHIVEAMVRWLAPIMSFTAEEIWKLL 779



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 51/156 (32%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGFDSPYIPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTCR 107
           +        KV   Q     R  A   ++    DFIR            T +        
Sbjct: 107 EGMVGKPGEKVTAAQFREECRKYAKTQVEAQKTDFIRLGVLGDWEHPYLTMDFNTEANII 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               KI   G ++KG     +     +   + EV  
Sbjct: 167 RSLSKIIANGHLHKGSKPVHWCTDCGSALAEAEVEY 202


>gi|237729320|ref|ZP_04559801.1| isoleucyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226909049|gb|EEH94967.1| isoleucyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 938

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRAIELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDPKDILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI +  +    H  + +++   S      Y
Sbjct: 668 GFDPVKDMVKPEEMVVLDRWAVGCAQAAQDEILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFHAADQDAVKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSDVNGPISLVIWTTTPWTLPANR 251


>gi|187250619|ref|YP_001875101.1| leucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238064868|sp|B2KB05|SYL_ELUMP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|186970779|gb|ACC97764.1| Leucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 835

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 7/179 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K Y      YP+ Q  H+GH      +D+L R+ ++ G DV+   G D  G      A 
Sbjct: 32  PKFYCLDMFPYPSGQGLHVGHPEGYTASDILVRYKKMKGFDVIHPMGWDAFGLPAENYAI 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV   +    N  NFR     L ++YD    I TT+  ++   + ++ +I  KG  Y+
Sbjct: 92  ATGVHPAITTKNNIDNFRRQIKSLGMAYDWTREIDTTDPNYYRWTQWIFLQIFKKGLAYE 151

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 +    +    ++EV+ G            ++      +  +++ Y D+LL   
Sbjct: 152 STVPINWCPSCKTGLANEEVFNGN----CERCGTKIESKNIRQWVLKITEYADRLLEDL 206



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 102/331 (30%), Gaps = 85/331 (25%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTT----TGYLDN 247
                 +G   L+   +  +    +   P       M  W  +   YL            
Sbjct: 455 NYEPTGTGESPLANVPEWVNTVCPVCAGPAKRETNTMPQWAGSCWYYLRYLDPKNDKTFV 514

Query: 248 PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHG 294
               + +  P D ++ G +    H +Y   +         +    P  K      + ++ 
Sbjct: 515 NPEIERECDPVDCYIGGAEHAVLHLLYSRFWHKVLYDLGYVKYKEPYAKLRHQGMILAYS 574

Query: 295 FILHKG-----------------------------EKISKSLGNVIDPIEVIEEVGVDAL 325
           +    G                             EK+SKS  NVI+P +++ + G DA 
Sbjct: 575 YRGEDGVYHGYDEVDLSDLQNPKLKTTGEKLNSMVEKMSKSKKNVINPDDILHKYGADAF 634

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R + +          +D  G++              V+R +  +    + +       + 
Sbjct: 635 RMYEMFMGPFEASKPWDMKGIEG-------------VNRFLKRVYAWGESVETDEVFLST 681

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
            +  IL   S+ + ++ E+++    + A++ ++   +++ +                   
Sbjct: 682 KELDILR--SKTIVKVSEDIEKFNFNTAVSALMIYFNDLSK------------------- 720

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +  V ++  +    LL  F P +  +++  
Sbjct: 721 -IKGVPLKHFKTFLALLHPFAPHITEELWSR 750


>gi|145220229|ref|YP_001130938.1| leucyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189083139|sp|A4SG27|SYL_PROVI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145206393|gb|ABP37436.1| leucyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 805

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 83/218 (38%), Gaps = 11/218 (5%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y+     YP+    H+GH      +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  EKPKYYVLDMFPYPSGSGLHVGHLEGYTASDISARYRRSRGYNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    +  SYD    I TT+  +    + ++ K+ + G  
Sbjct: 89  AIKTGTHPSDTTQKNIANFKETLQAMGFSYDWSREINTTDPGYFQWTQWIFLKLHEMGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       + +   A   ++EV +        A    V       +  +++AY D+LL  
Sbjct: 149 YMSEVDVNWCVELRAVLANEEVEEK------LADGLTVVRRPLRQWVLKITAYADRLLED 202

Query: 180 YE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            +    PE +  ++R     S       +L   R    
Sbjct: 203 LDGLDWPENVKQMQRNWIGRSEGVEVDFELRCHRTMLR 240



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 98/270 (36%), Gaps = 42/270 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD----NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +         +A +   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPHNSKLPVDPAKEAYWMNVDLYIGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  +       +    EK+SKS GNVI    V++  G DA+R + + 
Sbjct: 546 KVLFDLKVVSTKEPFQRLFNQGMILGEDNEKMSKSRGNVIPADHVLQTYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++ +G++         GI   +SR   ++  + +G          S   +L
Sbjct: 606 LGPLEQVKPWNTNGIE---------GISRFLSRVWRLVWPEPEGTRADLSTLAPS-PDLL 655

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++  + +N   + A+A+++   +E            L +T       V  + 
Sbjct: 656 RRMHKTIKKVAADTENLKFNTAIAEMMVFTNE------------LHRTGEGSRIAVETLL 703

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           + +          + P L+ ++++ L   +
Sbjct: 704 LLL--------APYAPHLSEELWEALGHQE 725


>gi|110597076|ref|ZP_01385365.1| leucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341267|gb|EAT59732.1| leucyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 819

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 83/214 (38%), Gaps = 9/214 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH      +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 39  DKPKYYVLDMFPYPSGSGLHVGHLEGYTASDITARYKRSCGFNVLHPMGWDAFGLPAEQF 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  +QN R+F++    +  SYD    I TT+  +    + ++ ++ + G  
Sbjct: 99  AIKTGTHPRITTEQNIRSFKETLQAMGFSYDWSREINTTDPGYFKWTQWIFLRLYEMGLA 158

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +    ++EV +     Y       V       +  +++AY ++L++ 
Sbjct: 159 YMSEVDVNWCEELKTVLANEEVEEKIADGYT------VIRRPLRQWVLKITAYAERLIAD 212

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +         + +   I   +    D  L    
Sbjct: 213 LDEVDWPENVKQMQRNWIGRSEGVEIDFELRCHK 246



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 101/272 (37%), Gaps = 44/272 (16%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYW 275
           +       M  W  +   YL      +     D  K ++W   DL++ G +    H +Y 
Sbjct: 492 VFRRETNTMPQWAGSCWYYLRFIDPANTNALIDPEKERYWMNVDLYIGGAEHAVLHLLYA 551

Query: 276 PAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             +         +S   P  K       +    EK+SKS GNVI    V+E  G DA+R 
Sbjct: 552 RFWHKVLFDLGVVSTREPFRKLFNQGMILGEDNEKMSKSRGNVIPADHVLERYGADAVRL 611

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           + +      +   ++ +G++         GI   +S+   +   D D    +P A    D
Sbjct: 612 YEMFLGPLEQVKPWNTNGIE---------GISRFLSKVWRLFHSDSDRDEESPAAKLSED 662

Query: 388 ---ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
              E +L    + ++++ E+ +N   + A+++++  V+E                     
Sbjct: 663 PMPEELLRKMHKTIRKVGEDTENLKFNTAISEMMVFVNE--------------------L 702

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   E +  L ILL  + P +  ++++ 
Sbjct: 703 HKAGCRNREAVETLLILLAPYAPHITEELWEA 734


>gi|14600670|ref|NP_147189.1| isoleucyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|8928379|sp|Q9YF67|SYI_AERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5104013|dbj|BAA79329.1| isoleucyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 1064

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 133/396 (33%), Gaps = 21/396 (5%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            W+  +         +    +        + E  +   G       N ++  E   +   
Sbjct: 405 CWRCKTPLLLRATTQWFVAVTRLKNQLMREAEKVEWQPGWAKTRFMNMLR--ELRDWVIS 462

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFV----KSGLKDLSLSR---KTFDWGIKIP 221
              Y    L  +         +    E +  +       L    + R   K    G  + 
Sbjct: 463 RQRYWGIPLPVWRCSSCGYEHVVGSVEELESMGGRRPENLHRPWVDRVELKCPRCGGSMK 522

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
             P  ++ VW D+   +  + GY  + +  +    P D  V G D +   F ++     +
Sbjct: 523 RVPD-VLDVWFDSGIAFYASLGYPRDRETWERLK-PVDFIVEGHDQIRGWFFSLLRSGVI 580

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
                P  + +     +  +G ++ KSLGN +D  E+I +V  D +R+++++     +D 
Sbjct: 581 GFGETPYRRVLVHGFALDEQGREMHKSLGNYVDFEELIAKVPRDVVRFWVLQN-TVWEDL 639

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVCS 395
            +   GL   +  D           S+ M L  +D    +      +    D  ILS  +
Sbjct: 640 RFSWKGL-DLMRRDFNVIWNVYAFASIYMGLDRFDPRRTSLSSVEDSLEVEDRWILSRLA 698

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + +     M++  IH A   + S +       Y    +    ++ +            +
Sbjct: 699 SLKRRYLTAMEDLRIHDAARALRSFIIEDVSHWYLRIIRRRVWEEVDTPSKRAAYATLYK 758

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           V+ +  ++    +P  A  ++  +F   E R  +S+
Sbjct: 759 VLWEWLLMAAPLIPYTAEYLYIKVFREAEERPEESI 794



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 22/181 (12%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K Y      Y +A+  HIG A+  ++ DV+ RF+R+ G +V    G D HG  I    +
Sbjct: 44  RKFYFLDGPPYASAKSIHIGTAWNKVVKDVVLRFYRMTGYNVWDKPGYDTHGLPIEVKIE 103

Query: 64  NA------------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHH 103
            +                      K FVD+N          + +  D      T    + 
Sbjct: 104 QSLGVRVKREIEEKVGVENFIAACKRFVDENMEAMTRQFKEIGVFMDWENPYVTYRDEYI 163

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEE 162
           ++   L KK  +KG +YKG     +  R E    D EV +  + +  +     PV+  E 
Sbjct: 164 ESGWWLVKKAWEKGLLYKGYRVLHWCPRCETTLADYEVSEYRELEDPSIYVKFPVEGREG 223

Query: 163 E 163
           E
Sbjct: 224 E 224


>gi|315031306|gb|EFT43238.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 804

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LELVDWPESIKDMQRNWIGRSE 226



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 67/442 (15%), Positives = 144/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 341 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 581 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+  ++
Sbjct: 632 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNVANK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 690 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 728

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 729 VPWPTYDEAA-LVEDEVEVVFQ 749


>gi|203284171|ref|YP_002221911.1| leucyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690557|sp|B5RL76|SYL_BORDL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|201083614|gb|ACH93205.1| leucyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 842

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 3/200 (1%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G    
Sbjct: 31  VPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPMGFDSFGLPAE 90

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
             A   G   K   ++N   F++    L  +Y  D  I+T +  ++   + ++ ++  KG
Sbjct: 91  NYAIQTGKHPKKITEKNIEKFKEQIKALGFAYDWDREIKTHDVNYYKWTQWIFLQLYKKG 150

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y      WY         ++EV +  DG       + V+      +  +++ Y ++L+
Sbjct: 151 LAYTKEIPVWYCPDLGTVLANEEVIQTPDGPRSERGFHKVERKPLRQWLLKITKYAERLI 210

Query: 178 SYYESHPEFILPIERRNEVI 197
              E         E +   I
Sbjct: 211 RDLEEVDWPDSVKEMQKNWI 230



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 113/326 (34%), Gaps = 84/326 (25%)

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKD 266
                   KI       M  W  +   Y+         +  +  K  +W P DL++ G +
Sbjct: 483 WVNVKRNGKIYKRETNTMPQWAGSCWYYIRYLDPHNKKEFANKEKINYWMPVDLYIGGAE 542

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE------------ 301
               H +Y   +         ++   P  K      + S  +    G             
Sbjct: 543 HSVLHLLYARFWHKVLYDLGYVNTKEPFRKLINQGMITSFAYQDENGILIPNDEVEKKDN 602

Query: 302 ----------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                           K+SKSL N+I+P ++I+E G D++R + +          ++  G
Sbjct: 603 KFFSKKNNKELKQIIAKMSKSLKNIINPDDIIKEYGADSMRIYEMFMGPLTDSKPWNTQG 662

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           L          GI   +++   +  K+     P         + I+S   + ++++ E++
Sbjct: 663 LI---------GIFRFLNKIWLIKNKELTNETPP--------KEIISELHKTIKKVTEDI 705

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +    + A++ ++  ++E            L K   +           + R ++I+L  F
Sbjct: 706 ETLNFNTAISTLMIFINE------------LLKHEKNYLK--------IFRPISIILSPF 745

Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491
            P L  ++++ +   +++  F++   
Sbjct: 746 APHLGEELWEFMG--EQSSIFKNAKW 769


>gi|119583214|gb|EAW62810.1| isoleucine-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 1268

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 349 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 798



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|300859685|ref|ZP_07105773.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|300850503|gb|EFK78252.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 804

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LELVDWPESIKDMQRNWIGRSE 226



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 341 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 581 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 632 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 690 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 728

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 729 VPWPTYDEAA-LVEDEVEVVFQ 749


>gi|203287707|ref|YP_002222722.1| leucyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690588|sp|B5RR67|SYL_BORRA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|201084927|gb|ACH94501.1| leucyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 842

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 3/200 (1%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + + +++YI     YP+A   H+GH       D+L R+  L+G +VL   G D  G    
Sbjct: 31  VPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRYKLLNGFNVLHPMGFDSFGLPAE 90

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
             A   G   K   ++N   F++    L  +Y  D  I+T +  ++   + ++ ++  KG
Sbjct: 91  NYAIQTGKHPKKITEKNIEKFKEQIKALGFAYDWDREIKTHDVNYYKWTQWIFLQLYKKG 150

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y      WY         ++EV +  DG       + V+      +  +++ Y ++L+
Sbjct: 151 LAYTKEIPVWYCPDLGTVLANEEVIQTPDGPRSERGFHKVERKPLRQWLLKITKYAERLI 210

Query: 178 SYYESHPEFILPIERRNEVI 197
              E         E +   I
Sbjct: 211 RDLEEVDWPDSVKEMQKNWI 230



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 113/326 (34%), Gaps = 84/326 (25%)

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKD 266
                   KI       M  W  +   Y+         +  +  K  +W P DL++ G +
Sbjct: 483 WVNVKRNGKIYKRETNTMPQWAGSCWYYIRYLDPHNEKEFANKEKINYWMPVDLYIGGAE 542

Query: 267 ILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE------------ 301
               H +Y   +         ++   P  K      + S  +    G             
Sbjct: 543 HSVLHLLYARFWHKVLYDLGYVNIKEPFRKLINQGMITSFAYQDENGILIPNDEVEKKDN 602

Query: 302 ----------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
                           K+SKSL N+I+P ++I+E G D++R + +          ++  G
Sbjct: 603 KFFSKKNNKELKQIIAKMSKSLKNIINPDDIIKEYGADSMRIYEMFMGPLTDSKPWNTQG 662

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           L          GI   +++   +  K+     P         + I+S   + ++++ E++
Sbjct: 663 LI---------GIFRFLNKIWLIKNKELTNETPP--------KEIISELHKTIKKVTEDI 705

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +    + A++ ++  ++E            L K   +           + R ++I+L  F
Sbjct: 706 ETLNFNTAISTLMIFINE------------LLKHEKNYLK--------IFRPISIILSPF 745

Query: 466 VPKLANKIFDILFVADENRCFQSLDQ 491
            P L  ++++ +   +++  F++   
Sbjct: 746 APHLGEELWEFMG--EQSSIFKNAKW 769


>gi|156937807|ref|YP_001435603.1| isoleucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566791|gb|ABU82196.1| Isoleucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 1025

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 125/406 (30%), Gaps = 34/406 (8%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP---VQWMEEEGYFF 167
           K ++      +  Y   +       Y  DE +            N    V W  +  Y  
Sbjct: 403 KGLAVHVGTIEHEYPHCWRCDTPLMYYADEQWFIKVEDLRETLVNENDKVTWYPKWAYDR 462

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVK------SGLKDLSLSRKTFDWGIKIP 221
                Q+           +  P+          +        LK ++L+ +      +  
Sbjct: 463 MSDWLQNAKDWTISRERFWGTPLPIWTCTSCGHRVAVSSLDELKKVALNPEAVVDHHRPW 522

Query: 222 DDPQ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
            D                 Y++ VW+D+   +  +   +   D     F+P D      D
Sbjct: 523 VDEVKLKCPKCGGVMVREPYVVDVWLDSGVAHTASLKQIGAEDYWD-LFYPYDWITEALD 581

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F+ +           P  + +     +   G+K+SKS GNV+   +V +  G D 
Sbjct: 582 QTRGWFYTLLVTGVTWHGRAPYKQVLTQGHILDKHGKKMSKSKGNVVWAKDVFKTYGADP 641

Query: 325 LRYFLVREIACGKDGFYDKDGLK-KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           +R+F   + A      +D + +K  +   D+           + +     + +     + 
Sbjct: 642 VRFFFAIKSAPWDSVRFDPEDIKLAKRTLDILWNSVKFAKSYMELDKWSLEKLEEGLKSL 701

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNP 441
              D  +L   +   + + E ++   IHRA   +   + EV   +Y    +P   ++   
Sbjct: 702 EPEDSWVLWKLNEYSKRVAEELERSAIHRAAQALQEFIVEVLSHKYITLVRPRVWEEEET 761

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD----ILFVADEN 483
                        +     +   FVP LA  ++      L   +E+
Sbjct: 762 PSKLAAYSALFLALDAAIRMSAPFVPFLAEYLYQRFQRALGFEEES 807



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG------ 66
               N   H+GH       DV+ RF R+ G  V    G D  G  +    +         
Sbjct: 46  PPTANGFMHVGHMRGRTYKDVILRFWRMKGYWVWDQAGWDTQGLPVELEVEKKHGFKSKK 105

Query: 67  -----------VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  VD    ++R  ++ +   + YD+   T   ++ D      KK+
Sbjct: 106 DILKYGVEKFVKECQELVDYYISHWRADSERMGLWLDYDNAYETRHPKYLDAAWSYLKKM 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+G IYKG        R E   +  EV  G  
Sbjct: 166 FDQGRIYKGLRVVAVCPRCETALSSHEVALGYK 198


>gi|47221543|emb|CAF97808.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1301

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 119/384 (30%), Gaps = 51/384 (13%)

Query: 141  VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
            V       ++N   N   W      ++        +     S                  
Sbjct: 732  VPDHHLKTWFNWMDNIRDWCISRQLWWGHRIPAYFVTVSDGSVEPGEDMDGHYWVSGRSE 791

Query: 201  KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                +  +         I +  D   ++  W  +     +  G+ +  +  K  F+P  L
Sbjct: 792  DEAREKAAKRFNVPADNISLRQDDD-VLDTWFSSGIFPFSIFGWPNETEDLKV-FYPGTL 849

Query: 261  HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI- 317
               G DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI 
Sbjct: 850  LETGHDILFFWVARMVMMGLKLTGKLPFEEVYLHAVVRDAHGRKMSKSLGNVIDPLDVIT 909

Query: 318  ------------------------------------EEVGVDALRYFLVREIACGKDGFY 341
                                                 E G DALR+ L    + G+D   
Sbjct: 910  GIALEGLHAQLTDSNLDPLEVEKAKQGQKADYPNGIPECGTDALRFALCAYTSQGRDINL 969

Query: 342  DKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQ 399
            D + +         N + N V  ++  +  ++         G  + SD  ILS  S  + 
Sbjct: 970  DVNRILG--YRHFCNKLWNAVKFAMRTLGDNFVPTEKAQLCGEESVSDRWILSRLSAAVA 1027

Query: 400  EIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNP--DRASTVLYVTVE- 453
                  +          + +       D Y ++ KP +   K +   +R + V   T+  
Sbjct: 1028 LCDAAFKTYDFPALTTAIYNFWLYELCDVYLESVKPVFIKAKEDSSCERPALVCRQTLYT 1087

Query: 454  VIRQLAILLQAFVPKLANKIFDIL 477
             +     LL   +P +A +++  L
Sbjct: 1088 CLEVGLRLLSPLMPFVAEELYQRL 1111



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 327 FMMCIPPPNVTGSLHLGHALTNAIQDTLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 386

Query: 67  VTTKVFVDQ---NSRNFRDMADVLDISYDDFIR 96
           +  K          +  +++    +   D    
Sbjct: 387 MREKGMSRHDLGREKFIQEVWKWKNEKGDRIYH 419


>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 933

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/345 (18%), Positives = 124/345 (35%), Gaps = 19/345 (5%)

Query: 143 KGADGQYYNAQHNPV-QWMEEEGYFFRLSAYQDKLLSYYESHPEFI---LPIERRNEVIS 198
            G +  Y   +H P      +  +   ++ +          + E     L    +     
Sbjct: 451 WGRNRIYSMIEHRPDWCISRQRSWGVPIAVFLCGECGEIILNEEIQEKVLSEFYKQGADI 510

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           + +  ++           G K       I+ VW D+  ++             K   WPA
Sbjct: 511 WFEKDVEYFIGDASCPKCGSKNIRKETDILDVWFDSGVSHAAVCE------VRKELGWPA 564

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D+++ G D     FH+    +       P  + +     +  KG K+SKSLGNVI P E+
Sbjct: 565 DMYLEGSDQHRGWFHSSLLESVGTRGRAPYKEVLTHGFVVDGKGLKMSKSLGNVITPDEI 624

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDG 375
           I++ G + LR ++  E    +D     D +K+ V +     I N +   +  +   + D 
Sbjct: 625 IDKYGAEILRLWVAAEDY-TEDVRISNDIIKRLVES--YRKIRNTMRYLLGNLYDFNPDE 681

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                    E D+ IL     V + I +  +N   H     +I+         Y D  K 
Sbjct: 682 NSIPFEKLKELDKYILMRWQEVKKRIYKAYENYQFHIFYHTLINFCINDLSAFYLDIIKD 741

Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                K +     +       + +++AI++   +   A+++++ L
Sbjct: 742 RVYAYKNDSFERRSAQSTMFTLAKEMAIVMNPILSFTADEVWEFL 786



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +K  +     Y N   H+GHA   I+ D + +     G    +  G D HG  I    
Sbjct: 46  DNKKYILHDGPPYANGHLHMGHALNKILKDFIIKTKSGFGFKTPYVPGWDCHGLPIEHQV 105

Query: 63  -------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
                               + + ++     R+    L +  D      T +  +     
Sbjct: 106 DKELGKKKDSIPKHEKRKHCRAYAEKFINIQREEFKRLGVFGDWENPYITMDFAYEANTL 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
               K  + G  YKG    ++ +       + EV   
Sbjct: 166 KELYKFFNNGGAYKGLKPVYWCISCVTALAEAEVEYH 202


>gi|6321531|ref|NP_011608.1| Vas1p [Saccharomyces cerevisiae S288c]
 gi|1711655|sp|P07806|SYV_YEAST RecName: Full=Valyl-tRNA synthetase, mitochondrial; AltName:
           Full=Valine--tRNA ligase; Short=ValRS; Flags: Precursor
 gi|1323141|emb|CAA97097.1| VAS1 [Saccharomyces cerevisiae]
 gi|151943371|gb|EDN61684.1| mitochondrial valyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190406886|gb|EDV10153.1| valyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|256269409|gb|EEU04706.1| Vas1p [Saccharomyces cerevisiae JAY291]
 gi|259146597|emb|CAY79854.1| Vas1p [Saccharomyces cerevisiae EC1118]
 gi|285812287|tpg|DAA08187.1| TPA: Vas1p [Saccharomyces cerevisiae S288c]
          Length = 1104

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 138/439 (31%), Gaps = 64/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R     ++  K +    +  +          D        + + +  E+ K A     
Sbjct: 481 DARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVR 540

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           + Q        E  YF  L   QD  +S                E     +         
Sbjct: 541 DGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRIDGDYWVAG 600

Query: 211 RKT-----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           R              +    +  D   ++  W  +     +T G+ +        F+P  
Sbjct: 601 RSMEEAEKKAAAKYPNSKFTLEQDED-VLDTWFSSGLWPFSTLGWPEKTK-DMETFYPFS 658

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +      L+ ++P  K+VF H  +   +G K+SKSLGNVIDP++V
Sbjct: 659 MLETGWDILFFWVTRMILLGLKLTGSVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDV 717

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +D L   L++     ++                                      
Sbjct: 718 ITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRDI 777

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
           + D L+        N I      ++  +  DY         G  +  ++ IL   +   +
Sbjct: 778 NLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGLSGNESLVEKWILHKLTETSK 837

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + E +  +    + + +        D Y +  K + +++ +     +       ++   
Sbjct: 838 IVNEALDKRDFLTSTSSIYEFWYLICDVYIENSK-YLIQEGSAIEKKSAKDTLYILLDNA 896

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P ++ +++  L
Sbjct: 897 LKLIHPFMPFISEEMWQRL 915



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 183 FCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQI 242

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T       +  
Sbjct: 243 WAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDWSREAFTLSPELTKSVE 302

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ D+G IY+      +S++
Sbjct: 303 EAFVRLHDEGVIYRASRLVNWSVK 326


>gi|256957334|ref|ZP_05561505.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077670|ref|ZP_05572031.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257421052|ref|ZP_05598042.1| leucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779827|ref|ZP_06745213.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270140|ref|ZP_07551457.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256947830|gb|EEU64462.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985700|gb|EEU73002.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257162876|gb|EEU92836.1| leucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453101|gb|EFG21517.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113985|emb|CBL32622.1| leucyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306513509|gb|EFM82124.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315035310|gb|EFT47242.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|329577672|gb|EGG59101.1| leucine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 804

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LELVDWPESIKDMQRNWIGRSE 226



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 341 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 581 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 632 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 690 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 728

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 729 VPWPTYDEAA-LVEDEVEVVFQ 749


>gi|238786671|ref|ZP_04630472.1| Isoleucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238725039|gb|EEQ16678.1| Isoleucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 938

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 118/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  EV+    + L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEVLHPRSTELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----VRPEFNGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI    +N   H  + +++   S      Y
Sbjct: 668 GFDPAQHQVKPEDMVVVDRWAVGRAQAAQAEIMAAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ L
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNQL 778



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGMAGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKADFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|15621426|dbj|BAB65421.1| 907aa long hypothetical isoleucyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 907

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 19/278 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW D+   +  + G        +    P DL + G D L   F ++     +L    
Sbjct: 379 VADVWFDSGVAFFASLGKDWEKKWKEIG--PVDLVLEGHDQLRGWFFSLLRAGVILLDRA 436

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEV--IEEVGVDALRYFLVREIACGKDGFYD 342
           P    +     +  +G ++ KSLGN ++P +V   E+ G D LR +L+R     +D  + 
Sbjct: 437 PYNAVLVHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGRDVLRLWLLRNTT-WEDAKFS 495

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE----SDESILSVCSRVL 398
              L +    DL       V  S  M L ++D  I       +     D  +LS  +RV+
Sbjct: 496 WKALDQTK-RDLNIIWNVYVFASTYMNLDNFDPRIYNLDNLKQYLRIEDLWLLSRYNRVV 554

Query: 399 QEIRENMQNQLIHRALAQVISLV-SEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEV 454
           +E++E+M +  +H    ++ S +  ++ R++     ++ W  +  +PD+ + + YV  EV
Sbjct: 555 KEVKESMNDFKVHELANKMTSFIIDDISRFYLRLVRKRAWN-ESNDPDKIA-MYYVLYEV 612

Query: 455 IRQLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQ 491
           ++   +LL   +P    +I+    V   ++   +SL +
Sbjct: 613 LKGSLVLLSPVIPFTTERIYQDFVVDKKDSVSMESLPE 650


>gi|164660792|ref|XP_001731519.1| hypothetical protein MGL_1702 [Malassezia globosa CBS 7966]
 gi|159105419|gb|EDP44305.1| hypothetical protein MGL_1702 [Malassezia globosa CBS 7966]
          Length = 1087

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 110/263 (41%), Gaps = 10/263 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y      +  + +PAD    G D     F+ +      L  
Sbjct: 532 EEVFDCWFESGSMPYAQAHYPFENTDTFKQSFPADFISEGLDQTRGWFYTLLILGTHLFG 591

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
             P    + S   +   G+K+SKSL N  DP  VI + G DA+R +++       ++  +
Sbjct: 592 EAPWKNLIVSGLVLAADGKKMSKSLRNFPDPTLVINKYGADAVRLYMINSPIVRAENLRF 651

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILK----DYDGMIPTPGAFTESDESILSVCS 395
            ++G+K  + +     +     +   V+++ K    D+        +    D  IL+ C 
Sbjct: 652 REEGVKDIIASVFLPWLNSFRFLLAQVTLLKKDTGIDFVYNPHAKVSGNVMDRWILARCQ 711

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++ +RE + N  ++  + +++++++E+ + Y    +     +  P+   + L    E 
Sbjct: 712 SLIECVREELGNYRLYTVVPRLLTMINELTNWYIRFNRRRLKGENGPEDTISALNSLFET 771

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  L + + +F P +   ++  L
Sbjct: 772 LYTLCLTMSSFTPFITENLYQGL 794



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+         +    PH GH     + DV+ RF    G  V    G D HG  +   
Sbjct: 44  KGRKPFSFYDGPPFATGLPHYGHLLAGTVKDVVTRFAHSTGHYVDRRFGWDCHGLPVEHE 103

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V +    +R   + +   I +D   +T + + 
Sbjct: 104 IDKKLGVKGKEDILAMGIPKYNAECRAIVMRYQAEWRSTVERMGRWIDFDHGYKTMDTKF 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            +T   ++K + DKG +Y+G     YS       ++ E
Sbjct: 164 METEWWVFKTLFDKGHVYRGLRVMPYSNACTTPLSNFE 201


>gi|29375390|ref|NP_814544.1| leucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|48428540|sp|Q837N5|SYL_ENTFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29342850|gb|AAO80614.1| leucyl-tRNA synthetase [Enterococcus faecalis V583]
          Length = 804

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LELVDWPESIKDMQRNWIGRSE 226



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 136/415 (32%), Gaps = 62/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 341 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 581 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 632 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                               V  +  E +     LL    P +  +++ IL   +
Sbjct: 690 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILGNEE 724


>gi|194335787|ref|YP_002017581.1| leucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229559998|sp|B4SDX3|SYL_PELPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194308264|gb|ACF42964.1| leucyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 807

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 9/214 (4%)

Query: 3   EREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH      +D+ AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGTGLHVGHLEGYTASDITARYKRSCGYNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N RNF+     +  SYD    I TT+  +    + ++ K+ ++G  
Sbjct: 89  AIKTGTHPKTTTEENIRNFKGTLQAMGFSYDWSREINTTDPHYFKWTQWIFLKLYERGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +    ++EV +     Y       V       +  +++AY D+LL+ 
Sbjct: 149 YMSEVDVNWCEELKTVLANEEVDEKIADGYT------VVRRPLRQWVLKITAYADRLLAD 202

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKT 213
            +         + +   I   +    D  L    
Sbjct: 203 LDELNWPENVKQMQRNWIGRSEGVEIDFELRCHN 236



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 104/284 (36%), Gaps = 44/284 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +     D  K ++W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPENQEKLVDPEKERYWMNVDLYIGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S+  P  K       +    EK+SKS GNVI    V+E  G DA+R + + 
Sbjct: 546 KVLFDLGVVSSREPFKKLFNQGMILGEDNEKMSKSRGNVIPADHVLERYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++ +G++         GI   +S+   ++  +++             E +L
Sbjct: 606 LGPLEQVKPWNTNGIE---------GISRFLSKVWRLVYGEHEESATLLSE-EAMPEELL 655

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ +    + A+++++  V+E                            
Sbjct: 656 RRMHKSIKKVGEDTEQLKFNTAISEMMVFVNE--------------------LQKSGCKN 695

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRL 493
              I  L +LL  + P +  ++++ +    +     F S D +L
Sbjct: 696 RSAIETLLVLLSPYAPHITEELWESIGHNYSISQAPFPSFDPKL 739


>gi|227550269|ref|ZP_03980318.1| leucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180594|gb|EEI61566.1| leucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 837

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 62  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 121

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 122 ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 181

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 182 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 237

Query: 180 Y 180
            
Sbjct: 238 L 238



 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + +     +  D      + 
Sbjct: 374 HDERDFEFAQTFGLEILPVIEGGDVQKAAYTEDGTHINSEFLDGMNKQEAIDKMNEWLEE 433

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 434 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 493

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 494 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 553

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 554 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 613

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 614 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 664

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 665 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 722

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 723 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWSILG 754


>gi|94721239|ref|NP_038203.2| isoleucyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|94721241|ref|NP_002152.2| isoleucyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|239938717|sp|P41252|SYIC_HUMAN RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Isoleucine--tRNA ligase; Short=IRS; Short=IleRS
 gi|119583217|gb|EAW62813.1| isoleucine-tRNA synthetase, isoform CRA_e [Homo sapiens]
 gi|158259489|dbj|BAF85703.1| unnamed protein product [Homo sapiens]
 gi|168984239|emb|CAI16202.2| isoleucyl-tRNA synthetase [Homo sapiens]
 gi|261857880|dbj|BAI45462.1| isoleucyl-tRNA synthetase [synthetic construct]
          Length = 1262

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 349 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 798



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|331090720|ref|ZP_08339568.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399989|gb|EGG79645.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 807

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK Y      YP+    H+GH    +I+D  +R+  L G  ++   G D  G      
Sbjct: 32  QREKYYCLDMFPYPSGNGLHVGHWRGYVISDAWSRYKLLQGHYIVHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   V  ++N +NF+   + +     +D  + TT+   +   + ++ K+  +G  
Sbjct: 92  AIKMGVHPSVSTEENIKNFKKQLNEISALYDWDMEVNTTDPAFYKWTQWIFVKMFKEGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y D+LL+ 
Sbjct: 152 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLRITKYADRLLND 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 208 LDKLDWPEKVKKMQAEWI 225



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 125/345 (36%), Gaps = 60/345 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+      ++       + + + ++   GI+
Sbjct: 417 FKLRDWVFSRQRYWGEPIPIVHCEHCGAVPVPEDQLPLTLPDVDSYEPTGTGESPLAGIE 476

Query: 220 IPDD------------PQYIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
              +                M  W    +++       ++            +  P D++
Sbjct: 477 SWVNTTCPVCGKPAKRETNTMPQWA--GSSWYFLRYVDNHNAEELVSKEKADEMLPVDMY 534

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G K+SKS GNV+ P
Sbjct: 535 IGGVEHAVLHLLYSRFYTKFLYDIGAVDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSP 594

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++ + G D+LR + +       D  +D  G+         +G+   ++R  ++++   
Sbjct: 595 DDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVYRFLNRVWNLVMDSK 645

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           D       A  ++ + ++ + ++++ +I   +++  ++  ++  +      ++  D  K 
Sbjct: 646 D-------ADVKATKEMIKIRNKMVYDITTRLESFSLNTVVSGFMEYN---NKLLDIAK- 694

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              K+   D+         E +   AILL  F P +A ++++ L 
Sbjct: 695 ---KEGGVDK---------ETLGTFAILLAPFAPHMAEELWEQLG 727


>gi|256854338|ref|ZP_05559702.1| leucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256709898|gb|EEU24942.1| leucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|323479993|gb|ADX79432.1| leucyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 804

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LELVDWPESIKDMQRNWIGRSE 226



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 341 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 401 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 581 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 632 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 690 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 728

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 729 VPWPTYDEAA-LVEDEVEVVFQ 749


>gi|253568351|ref|ZP_04845762.1| isoleucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251842424|gb|EES70504.1| isoleucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 1125

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 108/304 (35%), Gaps = 13/304 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P E   E    +      +       + G  +  +   ++ VW D+         Y  
Sbjct: 555 FVPGEYTEENYDKIDLHRPYVDDVILVSEDGQPMKRESD-LIDVWFDSGAMPYAQIHYPF 613

Query: 247 NPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 614 ENKDILDNREVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLVLDKNGNK 673

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK L N +DP   IE+ G D LR++++   +   +  +D +G+++              
Sbjct: 674 MSKRLNNAVDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGIEEVRRKFFGTLYNTYS 733

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  ILSV + +++E+          +A   +   
Sbjct: 734 FFALYANVDGFEYKEADVPMAERPEIDRWILSVLNTLIKEVDTCYNEYEPTKAGRLISDF 793

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W           +        +  +A L+    P  +++++  
Sbjct: 794 VNDNLSNWYVRLNRKRFW--GGEFTQDKLSAYQTLYTCLETVAKLMAPISPFYSDRLYTD 851

Query: 477 LFVA 480
           L  A
Sbjct: 852 LITA 855



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 20/192 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF 72
               N  P I H     I D+  R+  + G  V    G D HG  +  + + A   TK  
Sbjct: 12  PPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLPVELSVEKALGITKED 71

Query: 73  V-----------------DQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
           +                  + ++ + D+   +   +       T + R+ +T   L K++
Sbjct: 72  IGKKISVADYNAACRKDVMKYTKEWEDLTHQMGYWVDMKHPYITYDNRYIETLWWLLKQL 131

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
             KG +YKG     YS       +  E+ +             V   + +     ++ + 
Sbjct: 132 HKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVAQFKMKNPKPEMAEWG 190

Query: 174 DKLLSYYESHPE 185
                 + + P 
Sbjct: 191 TPYFLAWTTTPW 202


>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 913

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/466 (14%), Positives = 151/466 (32%), Gaps = 41/466 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAG---VTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
               D+ G    +A    G         + +       +  +  I  SY    RT +   
Sbjct: 336 LCPVDDKGVLTEEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPII 395

Query: 103 HDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
                  +   +    +            +  +   +N              A   P+  
Sbjct: 396 FRATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPV 455

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E     ++      ++         +  ER  + +     G   L      F     
Sbjct: 456 FYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLP--EGFTHLGSPNGEFR---- 509

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                  IM VW D+ +++                  PADL++ G D     F++    A
Sbjct: 510 ---KETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWFNSSLSTA 560

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++   +    
Sbjct: 561 VAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV-SSVDYQS 619

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILS 392
           D     D LK+         +   +  +   +L + D   P+          E D  +L 
Sbjct: 620 DVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLV 673

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRASTVLY 449
             + ++ +++E  +          + +   +     Y D  K    ++  N +    +  
Sbjct: 674 KLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQT 733

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
           V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 734 VLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 779



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|551622|dbj|BAA05835.1| isoleucyl-tRNA synthetase [Homo sapiens]
 gi|119583213|gb|EAW62809.1| isoleucine-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 1266

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 353 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 405

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 406 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 465

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 466 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 522

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 523 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 582

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 583 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 642

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 643 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 702

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 703 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 762

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 763 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 802



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 40  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 99

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 100 IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 160 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 203


>gi|237734465|ref|ZP_04564946.1| leucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382285|gb|EEO32376.1| leucyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 798

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKYYCVDMFPYPSGNGLHVGHPEGYTATDIVSRMKRMQGYNVLHPMGFDSFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N   F+     L  SY  D  I T++  ++   + ++ K+ D G  
Sbjct: 90  AIQTGHHPAEFTKKNIEVFKGQIKSLGFSYDWDREIATSDPEYYKWTQWIFTKLYDAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +A   ++EV  G           PV       +  +++ Y ++LL  
Sbjct: 150 YVDEIPVNWCPELKAVLANEEVIDGKS----ERGGYPVIRKPMRQWVLKITEYAERLLED 205

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 206 LDDLDWPEATKQMQRNWI 223



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 133/436 (30%), Gaps = 62/436 (14%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  +I   +    TE   H   + L   +
Sbjct: 331 YGTGAIMAVPAHDDRDWEFAKKFGIEIIPVLEGGNI---EEAAYTEDGLHINSQWL-DGL 386

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME---EEGYFFRLS 170
             +  I K       +   E   +          Q Y  +  P+  ME            
Sbjct: 387 GKQEAIDKMIAWLEENKCGEKKISYKLRDWLFSRQRYWGEPIPIVHMEDGTMRTVPVEEL 446

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +      ++ H     P+    + +     G K    +     W        +YI   
Sbjct: 447 PLELPATKNFQPHDSGESPLANCEDWLEVEIDGQKGRRETNTMPQWAGSCWYYIRYI--- 503

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSA 282
                         +        K+ P DL+V G +    H +Y   +         +  
Sbjct: 504 --------DPHNSEVICDPKLLEKWLPVDLYVGGAEHAVLHLLYSRFWHKVLYDAGVVKC 555

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  +       +    EK+SKS GNV++P +++   G D+LR + +          + 
Sbjct: 556 KEPWQRLFHQGMILGDNNEKMSKSRGNVVNPDDIVASHGADSLRLYEMFMGPLEAALPWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +GL         +G    + R   + ++             E+D S+  V  + ++++ 
Sbjct: 616 TNGL---------DGSRKWLDRVYRLFIE-------QDKLSDENDHSLDRVYHQTVKKVT 659

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ +    + A++Q++  ++E  +                 A TV     E       +L
Sbjct: 660 DDFETLGFNTAISQMMIFINECYK-----------------AETVYK---EYAFNFIKML 699

Query: 463 QAFVPKLANKIFDILF 478
               P +  +++ +L 
Sbjct: 700 SCIAPHICEEMWQMLG 715


>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782408|sp|B8CWL4|SYI_HALOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 929

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 104/289 (35%), Gaps = 17/289 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G K     + IM VW D+ +++                 WP+ L++ G D     F
Sbjct: 516 CPECGGKSFKKEEDIMDVWFDSGSSHKAVLE------TRDHLSWPSQLYLEGTDQYRGWF 569

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A       P    V +   +  KG K+SKS+GNV+ P +VI+  G D LR ++ 
Sbjct: 570 NSSLLTAVATEGKPPYEAVVTNGFVVDDKGNKMSKSIGNVVSPQDVIKRYGADILRLWVA 629

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDES 389
                  D       LK+  N+++   I N     +  I   +            E D  
Sbjct: 630 SSN-FKDDVRVSDRILKQ--NSEVYRRIRNTFRFILGNINDFNPGQHYVDYNDRAEIDRW 686

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAST 446
           I+     +++++         HR    V +   +     Y D  K       TN     +
Sbjct: 687 IMIKLQDLIKDVTRAYDEYEYHRVYHDVHNFCTIEMSSLYVDIVKDRLYTDGTNSLSRRS 746

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                 +++  L  L+   +   A +++  L   + ++  +S+     P
Sbjct: 747 AQSTLYDILLVLVKLVAPVLAHTAEEVWQHL--DESSKDAESIFLTDWP 793



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 53/158 (33%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  ++  +     Y N   HIGHA   I+ D++ R+  L G    +  G D HG  I   
Sbjct: 45  EGNKQFILHDGPPYANGDIHIGHALNKILKDIVTRYKTLSGYYSPYVPGWDTHGLPIEHK 104

Query: 62  AQNAGVT-------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     ++    L +   +D    T    +    
Sbjct: 105 VTKEMGDKAKDLSVSELRDKCRDYALKYVERQKEQFKRLGVWGEWDKPYLTLNPEYEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++ +++ +G  YKG     +    E    + EV  G
Sbjct: 165 IEVFGEMAKRGLFYKGKKPVHWCPSCETALAEAEVEYG 202


>gi|167761243|ref|ZP_02433370.1| hypothetical protein CLOSCI_03648 [Clostridium scindens ATCC 35704]
 gi|167660909|gb|EDS05039.1| hypothetical protein CLOSCI_03648 [Clostridium scindens ATCC 35704]
          Length = 850

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 75  KREKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAENY 134

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +   +N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 135 AIKMGVHPAISTAENVKNIKRQINEIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 194

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y ++LLS 
Sbjct: 195 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLRITKYAERLLSD 250

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 251 LDKLDWPEKVKKMQADWI 268



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 114/302 (37%), Gaps = 52/302 (17%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDG 250
           E      +G   L+   +  +    +   P       M  W    +++       ++ D 
Sbjct: 503 ESYEPTGTGESPLAGIDEWVNCKCPVCGKPAKRETNTMPQWA--GSSWYFLRYVDNHNDK 560

Query: 251 SK------AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFI 296
                    +  P D+++ G +    H +Y   +         +  + P  K        
Sbjct: 561 ELVSREKADEMLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAIDFDEPFHKLFNQGMIT 620

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
              G K+SKS GNV+ P +++ + G D+LR + +       D  +D  G+         +
Sbjct: 621 GKNGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------D 671

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           G+   + R  ++++   D       A  ++ + ++    R++ +I   +++  ++ A++ 
Sbjct: 672 GVNRFLKRLWNLVMDSKD-------ADVKATKDMIKERHRLVYDITTRLESFSLNTAISG 724

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +      ++  +  K    K+   D+         E +  +A+LL  F P +A +I++ 
Sbjct: 725 FME---HNNKLIEIAK----KEGAIDK---------ETLSTMAVLLSPFAPHIAEEIWEQ 768

Query: 477 LF 478
           L 
Sbjct: 769 LG 770


>gi|173164|gb|AAA35207.1| valyl-tRNA synthetase [Saccharomyces cerevisiae]
          Length = 1104

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 138/439 (31%), Gaps = 64/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R     ++  K +    +  +          D        + + +  E+ K A     
Sbjct: 481 DARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVK 540

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           + Q        E  YF  L   QD  +S                E     +         
Sbjct: 541 DGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRIDGDYWVAG 600

Query: 211 RKT-----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           R              +    +  D   ++  W  +     +T G+ +        F+P  
Sbjct: 601 RSMEEAEKKAAAKYPNSKFTLEQDED-VLDTWFSSGLWPFSTLGWPEKTK-DMETFYPFS 658

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +      L+ ++P  K+VF H  +   +G K+SKSLGNVIDP++V
Sbjct: 659 MLETGWDILFFWVTRMILLGLKLTGSVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDV 717

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +D L   L++     ++                                      
Sbjct: 718 ITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRDI 777

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
           + D L+        N I      ++  +  DY         G  +  ++ IL   +   +
Sbjct: 778 NLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGLSGNESLVEKWILHKLTETSK 837

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + E +  +    + + +        D Y +  K + +++ +     +       ++   
Sbjct: 838 IVNEALDKRDFLTSTSSIYEFWYLICDVYIENSK-YLIQEGSAIEKKSAKDTLYILLDNA 896

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P ++ +++  L
Sbjct: 897 LKLIHPFMPFISEEMWQRL 915



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 183 FCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQI 242

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T       +  
Sbjct: 243 WAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDWSREAFTLSPELTKSVE 302

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ D+G IY+      +S++
Sbjct: 303 EAFVRLHDEGVIYRASRLVNWSVK 326


>gi|257086155|ref|ZP_05580516.1| leucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256994185|gb|EEU81487.1| leucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315027603|gb|EFT39535.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|168334229|ref|ZP_02692430.1| isoleucyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 1040

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 88/256 (34%), Gaps = 5/256 (1%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+ +       Y         + +PA+      D     F+ +   + L+    
Sbjct: 513 VIDCWYDSGSMPFAQLHYPFENKELFEQNFPANFISEAVDQTRGWFYTLMAISTLIFDVA 572

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +         G K+SKS GNV++P  VI+  G DA+R++     A      +  D
Sbjct: 573 PYKNVIVMGHVCDQHGLKMSKSKGNVVEPFSVIDVTGADAVRWYFYYASAPWLPSRFGID 632

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIR 402
            + +     +   +       +   +  +D    T         D+ +LS  + V++ + 
Sbjct: 633 NVTEASRKFMGTVLNTYAFYILYADIDKFDPQKYTLDTASLNMMDKWVLSKLNTVVKNVD 692

Query: 403 ENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             + +  +  A   +   + +V + Y    +        P            V+  L  +
Sbjct: 693 TFLGDYKVFEASRTMQEFIDDVSNWYIRRSRERFWLGGMPQTKINAYMTLYTVLETLIKI 752

Query: 462 LQAFVPKLANKIFDIL 477
               +P L  +I+  L
Sbjct: 753 AAPLIPFLTEEIYQNL 768



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 19/184 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E           N +PHIGH    +I D + R+  + G  V    G D HG  +    
Sbjct: 37  NKENFTFYEGPPTANGKPHIGHVLTRVIKDFVPRYQTMKGKYVTRKAGWDTHGLPVELEI 96

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       K  V +   ++  M++ +   I  +    T +  + 
Sbjct: 97  EKQLGISGKPEIEKYGVDAFIKKCKESVFKYQSDWEKMSERVGYWIDLEHPYITYDNNYI 156

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++     K I DK  +YKG     Y  R     +  EV +G             + ++E+
Sbjct: 157 ESVWWSLKSIWDKNLMYKGYKIVPYCPRCGTPLSSHEVAQGYKDITDITAIAKFKLLKEK 216

Query: 164 GYFF 167
             FF
Sbjct: 217 NTFF 220


>gi|56964635|ref|YP_176366.1| leucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|60390667|sp|Q5WE05|SYL_BACSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56910878|dbj|BAD65405.1| leucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 804

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 78/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E    Y      YP+    H+GH       D+LAR  R+ G +VL   G D  G    + 
Sbjct: 29  EGPHFYALDMFPYPSGAGLHVGHPEGYTATDILARMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  QN   F+     L  SY  D  I TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGKHPATFTKQNIDTFKRQIKELGFSYDWDREISTTDPHYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++E+  G          +PV+    + +  R++AY ++LL  
Sbjct: 149 YIDEVAVNWCPALGTVLANEEIVDG----VSERGGHPVERRPMKQWVLRITAYAERLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 205 LEELEWPESLKDMQRNWIGKSE 226



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 103/284 (36%), Gaps = 43/284 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++    D  K K W P D ++ G +    H +Y   + 
Sbjct: 484 ETNTMPQWAGSCWYYLRYIDPTNDEALADPEKLKNWLPVDTYIGGAEHAVLHLLYARFWH 543

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  K       +    EK+SKS GNV++P E+I   G D LR + + 
Sbjct: 544 KFLYDIGVVPTKEPFQKVFNQGMILGENNEKMSKSKGNVVNPDEIIASHGADTLRLYEMF 603

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    +  +GL         +G    + R   +I+ +  G + +     E +E+ +
Sbjct: 604 MGPLDASVAWSTNGL---------DGSRRFLERVWRLIVNEETGKLNSNVKDVEGNEAFV 654

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+      +  ++Q++  V+E ++      P  L               
Sbjct: 655 RTYHQTVKKVTEDFAELRFNTGISQLMVFVNEGNK--QEVLPKAL--------------- 697

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
              I     LL    P +A ++++ L   D      + + D+ L
Sbjct: 698 ---IEGFVKLLSPVAPHIAEELWEKLGHTDTITYEAWPTYDESL 738


>gi|326566780|gb|EGE16919.1| valyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326575221|gb|EGE25149.1| valyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326576693|gb|EGE26600.1| valyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 975

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 126/413 (30%), Gaps = 97/413 (23%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++ +  + ++  +       +   ++     +P +  N  +++++  ++D  +SR+   W
Sbjct: 382 IEPLLTDQWYVAIETLAKPAIEAVQNGDIQFVPQQYTNMYMAWMRD-IQDWCISRQ-LWW 439

Query: 217 G--IKIPDDP---------------------------QYIMYVWIDALTNYLTTTGYLDN 247
           G  I    D                              ++  W  +     +T  +   
Sbjct: 440 GHRIPAWYDDNGNVYVGRDESEVRAKYSLADTPLRQDDDVLDTWFSSALWTFSTLDWTGQ 499

Query: 248 PDGSK-----AKFWPADLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVFSHG 294
                       F P  + V G DI+ F         +           +P         
Sbjct: 500 TSFDDYGDALQTFHPTSVLVTGFDIIFFWVARMIMMTMHFIKDKDGKPQVPFKTVYVHGL 559

Query: 295 FILHKGEKISKSLGNVIDPIEVIEE----------------------------------- 319
               +G+K+SKS GNV+DPI++I+                                    
Sbjct: 560 VRDSQGQKMSKSKGNVLDPIDLIDGIDLENLVNKRTQGLMNPKEADNIAKQTRQEFPNGI 619

Query: 320 --VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--- 374
              G DALR+        G+   +D   ++     +  N I N  +R V M   D D   
Sbjct: 620 PAFGTDALRFTYASLAGTGRGINFDLKRIEG--YRNFCNKIWN-ATRFVLMNCIDKDGRP 676

Query: 375 ---GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
                   P  +   +  I+S  +  + +I E++           +   +     D Y +
Sbjct: 677 QNIDKSANPKLWQLPEHWIISRLNATINDIHEHISQYRFDLMSQAIYEFIWNEYCDWYVE 736

Query: 430 AQKPWELKKTNP-----DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K              +R + + YV + V+     +    +P L  +I+  +
Sbjct: 737 FAKSSLNASGQDSTVSDERKAQIRYVLLFVLEMAMKMTHPIMPYLTEEIWQTI 789



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)

Query: 1   MKEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M +++  + I+          H+GH +   I D L R+HR+ G + L+  GTD  G    
Sbjct: 37  MSDKQNAFSIALPPPNVTGSLHMGHGFNNTIMDTLTRYHRMMGHNTLWQPGTDHAGIATQ 96

Query: 60  KAAQ--------------NAGVTTKVFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
              +                    K++  +       +R  R +   +D S + F  T +
Sbjct: 97  MVVERQLGLQGISRHDLGREKFIDKIWAWKEQSGNTITRQIRRLGSSVDWSRERF--TMD 154

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++ D+G IY+G     +  +     +D EV
Sbjct: 155 DGLSQAVKEVFVRLYDEGLIYRGKRLVNWDPKLHTALSDLEV 196


>gi|281343932|gb|EFB19516.1| hypothetical protein PANDA_017542 [Ailuropoda melanoleuca]
          Length = 1271

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 70/503 (13%), Positives = 146/503 (29%), Gaps = 43/503 (8%)

Query: 28  MIIADVLARFHRLDG--LDVLFTTGTDEHGQKIAKAAQNAGVT--TKVFVDQNSRNFRDM 83
            ++AD   R     G      +    D          Q               +    D 
Sbjct: 309 TVLADSYVREEEGTGVVHQAPYFGADDYRVCMDLSIIQKDSPPVCPVDASGCFTAEVTDF 368

Query: 84  ADVLDISYD-DFIRTTEKRHHDTCRILWKKISDKGDIYK----GCYSGWYSLRDEAYYND 138
                   D + IRT +++        +                     + +R E     
Sbjct: 369 TGQYVKDADKNIIRTLKEKGRLLVSSTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMV-- 426

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           +++ +  D  Y+  +   V+      +      +      Y+ +     +  +    V  
Sbjct: 427 EQLLRNNDLCYWVPEF--VREKRFGNWLKDARDWAVSRNRYWGTPIPLWVSDDFEEVVCI 484

Query: 199 FVKSGLKDLSLSRKTF-------------DWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
              + L++LS ++ +                G  +      +   W ++ +       Y 
Sbjct: 485 GSMAELEELSGAKVSDLHRESIDHLTIPSRCGKGVLHRISEVFDCWFESGSMPYAQVHYP 544

Query: 246 DNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSH------GFIL 297
                     +PAD    G D     F+ +   A  L    P    + +          L
Sbjct: 545 FENKREFEDTFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFRNVIVNGLVLARQVHAL 604

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G+K+SK   N  DP+ +I + G DALR +L+       +    K+   + V  D+   
Sbjct: 605 FDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVKAENLRFKEEGVRDVLKDVLLP 664

Query: 358 IGNLVSRSVSMIL--------KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             N     +  +L        +         G+   +D  +LS    ++      M    
Sbjct: 665 WYNAYRFFIQNVLRLQKEEGMEFLYNENTVKGSANVTDRWVLSCIQSLVGFFETEMAAYR 724

Query: 410 IHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           ++  + +++  V    + Y    +     +   +   T L     V+  L  L+  + P 
Sbjct: 725 LYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVTALETLFSVLLSLCRLMAPYTPF 784

Query: 469 LANKIFDILFVADENRCFQSLDQ 491
           L   ++  L +  +    Q  D 
Sbjct: 785 LTELMYQNLKLLIDPVSVQDKDT 807



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K++ K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 39  KQKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 98

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++   + L   I +D+  +T   + 
Sbjct: 99  IDKTLGIRGPEDVAKMGIVEYNNQCRAIVMRYSTEWKSTVNRLGRWIDFDNDYKTLYPQF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 159 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 202


>gi|302546158|ref|ZP_07298500.1| isoleucine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463776|gb|EFL26869.1| isoleucine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 1043

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 131/423 (30%), Gaps = 69/423 (16%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  +K          DE       +       +    H P+ +  +  ++ R +A +D L
Sbjct: 360 GQFFKKADEALVRDMDERGLLFKHLAYEHSYPHCWRCHTPLIYYPQPSWYIRTTAIKDAL 419

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD-------------- 222
           L    +      P   ++       +   D +LSR    WG  +P               
Sbjct: 420 LRE--NERTNWFPDSVKHGRFGDWLNNNIDWALSRNR-YWGTPLPIWRCEENHLTCVGSL 476

Query: 223 --------------DPQ------------------------YIMYVWIDALTNYLTTTGY 244
                         DP                          ++  W D+ +      GY
Sbjct: 477 TELSELTGTDQTGLDPHRPYIDEVTFACPADGCSLTATRVPEVIDAWYDSGSMPFAQWGY 536

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    K +PA       D     F+ +     L+         V     +   G K
Sbjct: 537 PYRNKEVFEKRYPAQFISEAIDQTRGWFYTMMAVGTLVFDRSSFENVVCLGHILAEDGRK 596

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN-- 360
           +SK LGN++ PI ++++ G DA+R+F+    +           +++ V   L        
Sbjct: 597 MSKHLGNILQPIPLMDQHGADAVRWFMAAGGSPWAARRVGHGTIQEVVRKTLLTYWNTVA 656

Query: 361 ---LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
              L +R+      D D   P        D  +L     + +++ + M+     RA   +
Sbjct: 657 FQALYARTTGWAPSDAD---PARAERPMLDRWLLGELGTLTEQVTQAMEAYDTQRAGRLL 713

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            + V ++  ++  +      + +     T      EVI  +  L+   VP +  +++  L
Sbjct: 714 SAFVDDLSNWYVRRSRRRFWQGDAAALRT----LHEVIETVNRLMAPLVPFITERVWQDL 769

Query: 478 FVA 480
            V 
Sbjct: 770 VVP 772



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 38  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 97

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F D+   +   +  DD  RT +  +
Sbjct: 98  VEKEMGFSGKKDIEAFGIAEFNAKCRESVTRHTDAFADLTQRMGYWVDLDDAYRTMDPEY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I  KG + +      +  R     +D E+ +G +
Sbjct: 158 VESVWWSLKEIFTKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 201


>gi|23012733|ref|ZP_00052746.1| COG0525: Valyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 406

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 91/242 (37%), Gaps = 15/242 (6%)

Query: 266 DILRFHAIYWPAFLLSANLPLPKK-----VFSHGFIL-HKGEKISKSLGNVIDPIEVIEE 319
                H +           P   +     ++ H  +   KG+K+SKS GN+IDP+++IE+
Sbjct: 5   WHWFRHHLLLGRPHDDDGHPFHGRRALQDIYIHALVRDEKGQKMSKSKGNIIDPLDLIEK 64

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G DALR+ L    A G+D    +  ++     + A  + N  +R   M           
Sbjct: 65  YGCDALRFTLSALAAQGRDVKLAESRVEG--YRNFATKLWN-AARFCQMNECQPVAGFDP 121

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELK 437
                  +  I++  + +  ++ + ++      A       V     D Y +  KP    
Sbjct: 122 KAVKETVNRWIVAKTAELAAKVGQAIETYRYDGAAGGAYQFVWGTFCDWYLEFAKP-IFT 180

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRLK 494
             + D  +        V+ Q+  +L   +P +  +++  +   D +   R +  LD    
Sbjct: 181 GADEDAKAETRATAAWVLDQILHVLHPLMPFITEELWGQIAERDGDLMLRSWPVLDGLAA 240

Query: 495 PG 496
           PG
Sbjct: 241 PG 242


>gi|315161879|gb|EFU05896.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0645]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|238810052|dbj|BAH69842.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 794

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI +   YP+   H+GH     I DVLAR++R  G +VL   G D  G     AA   G+
Sbjct: 49  YILSMFPYPSGNIHMGHVRNYAIGDVLARYYRRKGFNVLHPFGWDAFGLPAENAAIKNGI 108

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             K +  +N +N       L IS+  +    T ++ +    ++++ K+  KG +Y+    
Sbjct: 109 HPKDWTYKNIKNMNPKLKDLGISFAWNYECITADEIYTKWEQLIFIKMWKKGLVYRKKAL 168

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHP 184
             +   D+    +++V  G          N V   E E Y+ ++  Y ++L +  E    
Sbjct: 169 LNWCENDQTVLANEQVEDGK----CWRCGNIVVQKEMEQYYLKIRNYAEELQNDLELLKN 224

Query: 185 EFILPIERRNEVISFVKSG 203
            +   +    +     ++G
Sbjct: 225 HWPDKVLMMQKNWIGYETG 243



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 120/360 (33%), Gaps = 36/360 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+    + G            L Y  +      P++  N+ +   K 
Sbjct: 398 WGISRQRYWGAPIPMINCAKCGLVPEKEENLPVTLPYKVNFTTSGNPLKTNNKWLE-TKC 456

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                  +R+T  +      D  +    +    T                  +   D ++
Sbjct: 457 PKCHSKATRETDTF------DTFFESSWYFLRYTTPPAKRESHIFDKVQLKYWNNVDEYI 510

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P    + + G IL  G K+SKS GNV+ P 
Sbjct: 511 GGVEHAILHLLYARFFTKVLADLKMVDFREPF-DNLLTQGMILKDGLKMSKSKGNVVSPD 569

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I++   D +R F++      K+  +   G++          I  L++R   +  KD  
Sbjct: 570 EMIKKYDADTMRLFVLFAAPPEKELEWISSGIEGCH-----KFIKRLIARRKEVKAKDKL 624

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             I       E   +   +   ++++      ++  + A   +I+   E    +D     
Sbjct: 625 ADIKNLKLNNEEKNARRKLYQGLIKQ-ENLFSDRRNNYAFNTIIAWAMETFNAYDKITNS 683

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            L K              E+   L  +L+ F+P LA ++ +  F     + F   +  L+
Sbjct: 684 LLIK--------------EMYYVLLNILEPFIPHLAWELSEQFFKLKNLKDFSVDNSALE 729


>gi|284006374|emb|CBA71610.1| isoleucyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 922

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 114/350 (32%), Gaps = 41/350 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSL-SRKT 213
           V+W+ E G     S   ++          + +P+      +        L+ +   +R  
Sbjct: 426 VKWIPEWGQSRIESMVANRPDWCISRQRTWGMPMALFVHKQTEKLHPRTLELIEQVARLV 485

Query: 214 FDWGIKIPDDPQYI----------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              GI+   D   I                + VW D+ + +     Y       + K   
Sbjct: 486 EKSGIQAWWDLDPIALLGSDAADYVKVPDTLDVWFDSGSTH-----YAVVDVRPEFKGHS 540

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F +    +  +    P  + +     +  +G K+SKSLGN I P +
Sbjct: 541 ADLYLEGSDQHRGWFMSSLMLSTAMKGKAPYREVLTHGFTVDGQGRKMSKSLGNTISPQD 600

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++           Y  +          +      +  +   +L + +G
Sbjct: 601 VMNDLGADILRLWVAS-------TDYTSEIAVSSEILKRSADSYRRIRNTARFLLANLNG 653

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +        EI  +  N   H    +++   S      Y 
Sbjct: 654 FDPALHQVKPEQMVVLDRWAVGRAKAAQTEIMMHYANYDFHAVAQRLMQFCSVEMGSFYL 713

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K  +   K++     +       +I  L   +   +   A++I+  L
Sbjct: 714 DIIKDRQYTAKSDSLARRSCQTALFHIIEALVRWIAPILSFTADEIWQQL 763



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 6/98 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    +     Y N   HIGH+   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  TGKPVFILHDGPPYANGSLHIGHSVNKILKDIIIKSKGFAGFDSPYIPGWDCHGLPIEHK 89

Query: 62  AQNAGVTT------KVFVDQNSRNFRDMADVLDISYDD 93
            +              F ++  +  ++  +     +  
Sbjct: 90  VEQIIGKPGDKVSAAEFREECRKYAKEQIEGQKADFIR 127


>gi|254382582|ref|ZP_04997940.1| isoleucyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341485|gb|EDX22451.1| isoleucyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 1052

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/419 (15%), Positives = 135/419 (32%), Gaps = 33/419 (7%)

Query: 75  QNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA 134
              R    +      S+  +IRTT        +    + ++K + +              
Sbjct: 401 HCWRCHTALLYYAQPSW--YIRTT------AVKDAMLRENEKTNWFPDSVKQGRFGD--- 449

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
            + ++ +        Y     P+   EE+      S      LS      +  L   R  
Sbjct: 450 -WLNNNIDWALSRNRYWGTPLPIWRCEEDHLTCVGS---RAELSELSGTDQSALDPHRPY 505

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
                     +  SL+                ++  W D+ +      GY         K
Sbjct: 506 IDDVTFPCTHEGCSLTAVRVP----------EVIDAWYDSGSMPFAQWGYPYKNKEIFEK 555

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PA       D     F+ +     L+         V     +   G K+SK LGN++ 
Sbjct: 556 RYPAQFISEAIDQTRGWFYTMMAVGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQ 615

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           PI ++++ G DA+R+F+    +           +++ V   L      +  +++     +
Sbjct: 616 PIPLMDQHGADAVRWFMAAGGSPWAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSN 675

Query: 373 YDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
           +      P     T  D  +LS    ++ E+ E M++    RA   + S V ++  ++  
Sbjct: 676 WAPSAADPAPADRTVLDRWLLSELHTLVAEVTEAMESYDTQRAGKLLSSFVDDLSNWYVR 735

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           +      + +     T      +V+  +  L+    P +  +++  + V       +S+
Sbjct: 736 RSRRRFWQGDASALRT----LHDVVETVTRLMAPLTPFITERVWQDMVVPVAPDAPESV 790



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 41  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F D+   +   +  DD  RT +  +
Sbjct: 101 VEKELGFNGKQDIEAYGIAEFNAKCRESVTRHTDAFTDLTTRMGYWVDLDDAYRTMDPEY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 161 VESVWWSLKEIFNKGLLTQDHRVAPWCPRCGTGLSDHELAQGYE 204


>gi|160937045|ref|ZP_02084408.1| hypothetical protein CLOBOL_01934 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439946|gb|EDP17694.1| hypothetical protein CLOBOL_01934 [Clostridium bolteae ATCC
           BAA-613]
          Length = 804

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 7/197 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      A
Sbjct: 30  KEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLKGKYVIHPMGWDAFGLPAENYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV      + N RN +     +     +D  + TT+   +   + ++ ++  KG  Y
Sbjct: 90  IKMGVHPAKSTEANIRNIKRQIKQIAAIYDWDMEVNTTDPDFYKWTQWIFVQMFKKGLAY 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  +   +    +    ++EV  G            V       +  +++AY ++LL+  
Sbjct: 150 EKEFPINWCPSCKTGLANEEVVNG----CCERCGTTVTKKNLRQWMLKITAYAERLLNDL 205

Query: 181 ESHPEFILPIERRNEVI 197
           +         + + + I
Sbjct: 206 DKLDWPEKVKKMQTDWI 222



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 118/346 (34%), Gaps = 56/346 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 414 YKLRDWVFSRQRYWGEPIPIIHCPKCGCVPVPEDQLPLKLPEVESYQPTGTGESPLAAID 473

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +    +   P       M  W         Y+ +    +     KA  + P D+++ 
Sbjct: 474 EWVNTTCPVCGAPAKRETNTMPQWAGSSWYFLRYVDSHNKEELVSREKADKYLPVDMYIG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 534 GVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D+LR + +       D  +D  G++         G+   ++R  ++++ + D 
Sbjct: 594 LVRDYGCDSLRLYELFVGPPELDAEWDDRGIE---------GVSRFLNRFWNLVMDNKDK 644

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +          + ++ +  +++ +I        ++  ++  +      ++  +  +   
Sbjct: 645 DVKAS-------KEMIKLRHKLVYDIEYRFNQFSLNTVISGFMEYN---NKLIELAR--- 691

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K+   DR         E ++   ILL  F P +  +++  L   D
Sbjct: 692 -KEGGIDR---------ETLKTFVILLAPFAPHIGEELWQQLGGDD 727


>gi|118443863|ref|YP_877455.1| leucyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231600|sp|A0PYK3|SYL_CLONN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118134319|gb|ABK61363.1| leucyl-tRNA synthetase [Clostridium novyi NT]
          Length = 812

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 86/231 (37%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+A + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSAAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    +N  N  +    +    ++D  I T    ++   + ++ K+ +KG  Y+
Sbjct: 91  KTGIHPQDSTMKNIENMEEQLRSMGAMFNWDHEIITCLPDYYKWTQWVFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V+      +F +++ Y D+LL   +
Sbjct: 151 KNAPVNWCPSCNTVLANEQVLDGH----CERCDSLVEKKALTQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                      +   I   K       +  S  TFD      D    + YV
Sbjct: 207 GLDWPEKTKAMQKHWIGKSKGVEATFKVENSDITFDVFTTRVDTLNGVTYV 257



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 112/341 (32%), Gaps = 39/341 (11%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + ++ G            L Y             ++E            
Sbjct: 418 QRYWGAPIPVVYCDKCGTVAVPEEQLPVELPYNIEFTPDGKSPLSKSEEFLHTTCPKCGG 477

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ YV                       K  P D +V G + 
Sbjct: 478 HAVRETDTLDTFVCSSWYYLRYV--------DNNNSEKAFDIDKVNKMLPVDKYVGGPEH 529

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 530 ACMHLLYARFITKALRDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTIAPDDYIKE 589

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV--SRSVSMILKDYDGMI 377
            G D  R +L+   A  + G +  D +K    +   + +  ++  SR+     K+     
Sbjct: 590 YGADVFRMYLMFGFAYSEGGAWSDDAIKS--MSKFVDKVERILADSRTQMADSKN----- 642

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
            T     ++++ +       +Q + E+ +    + A+A+++   + + +Y + +    L 
Sbjct: 643 -TKTTIEKAEKELNYTRHYAIQHVTEDTEKFQFNTAIARIMEYTNSLSKYLNEE---NLN 698

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +    E +     LL  F P  + + +++L 
Sbjct: 699 ----------VEFLKEALTDYIKLLAPFAPHFSEEQWELLG 729


>gi|120437261|ref|YP_862947.1| valyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|166225521|sp|A0M5I5|SYV_GRAFK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|117579411|emb|CAL67880.1| valyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 876

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 130/394 (32%), Gaps = 58/394 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++       +         ++P +  N         ++D ++SR+   W
Sbjct: 350 IEPKLSDQWFLKMKEMAQPAIKAVLGDDINLVPEKFLNT-YRHWMENVRDWNISRQ-LWW 407

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 408 GHQIPAYFYGKGKNDFVVAETLNQAVLKAREVTGNAELQASDLTQDKDALDTWFSSWLWP 467

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    +  P+  +   ++P +  V   +IL F    +    +      P      +   
Sbjct: 468 MSVFNGILEPENKEIEYYYPTNDLVTAPEILFFWVARMIMAGYEYRGERPFKNVYLTGIV 527

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  DP+ +IE+ G D +R  ++     G D  +D+D  K+       
Sbjct: 528 RDKQRRKMSKSLGNSPDPLGLIEQYGADGVRVGMLLSSPAGNDLMFDEDLCKQGS----- 582

Query: 356 NGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            G  N +  +  ++   +    I  P     +     +   + ++EI ++     I  AL
Sbjct: 583 -GFTNKIWNAFRLVKGWEISEKIEQPETAKMAINWYTARFQKTIREIEDHYSKYRISDAL 641

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                L+ +     + +  KP       P  A T     + ++ +   +L  F+P +  +
Sbjct: 642 MSTYKLIWDDYCSWFLEMVKPGY---GEPMDAKT-YKAIIAILEENLKILHPFMPFVTEE 697

Query: 473 IFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
           I+  +     +E           +    + K F 
Sbjct: 698 IWQEITERTPEEALIIAKWPVEKEFDETIIKEFS 731



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 18/161 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +RE   I           H+GH     I DVL R  RL GL+  +  GTD        
Sbjct: 30  VDDREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLKGLNACWVPGTDHASIATEA 89

Query: 61  A----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
                             +        +  ++          L  S D      T +   
Sbjct: 90  KVVAKLKAEGIDKNDLTREEFLQHAWEWTHKHGGIILQQLKHLGASCDWERTKFTMDDDM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +   ++  + +KG +Y+G     +  + +   +D+EV  
Sbjct: 150 SASVIKVFVDLYEKGLVYRGYRMVNWDPQAKTTLSDEEVNY 190


>gi|50542886|ref|XP_499609.1| YALI0A00264p [Yarrowia lipolytica]
 gi|49645474|emb|CAG83529.1| YALI0A00264p [Yarrowia lipolytica]
          Length = 1080

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 145/442 (32%), Gaps = 17/442 (3%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT-C 106
               D+ G+     +   GV  K       +  ++M  ++    D  +R +      +  
Sbjct: 354 PNPVDDAGKFTPAVSDWEGVYVKDADRSIIKKIKEMGRLV---VDGQVRHSYPFCWRSDT 410

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
            +L++ +       K          D+  +    +  G  G +     +           
Sbjct: 411 PLLYRTVPSWFVRIKEMIPQMLENIDKTNWVPSNIKDGRFGNWIKNARDWNISRNRYWGT 470

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
                  D             L      + I  +     D          G+    +   
Sbjct: 471 PIPLWVSDDYEEVVCVGSVAELEELSGVKNIDDIHRHHIDDITIPSKMGKGVLRRVEE-- 528

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSK--AKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           +   W ++ +    +  Y  +P+  +   K +PAD    G D     F+ +      L  
Sbjct: 529 VFDCWFESGSMPYASRHYPFDPESKEVMEKGFPADFISEGIDQTRGWFYTLTVLGNYLFG 588

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + S   +   G+K+SK L N  DP EV+++ G DALR +L+       D   +
Sbjct: 589 VSPFKNVIVSGLVLAADGKKMSKRLKNYPDPTEVLDKFGADALRLYLINSPVLRADTLKF 648

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSR 396
            ++G+++ V+  L             VS++ K Y       P   +    D  IL+    
Sbjct: 649 QEEGVREVVSKVLLPWWNSYKFWEGQVSLVNKLYGTEFKYNPALKSDNVMDRWILASLQS 708

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  I   M+   ++  + +++ L+ ++ + Y    +         + A   L    E  
Sbjct: 709 LVGHIHAMMKEYKLYAVVPRLLHLIDDLTNWYIRLNRSRLKGDNGEEDAVKALNTLFEAE 768

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   +  F P L+  I+  +
Sbjct: 769 YTLVRAMAPFTPFLSETIYQKI 790



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 48/145 (33%), Gaps = 19/145 (13%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++          +    PH GH     I D++ R+  + G  V    G D HG  +    
Sbjct: 29  DKPHFTFYDGPPFATGTPHYGHILASTIKDIVPRYAHMTGHHVERRFGWDTHGLPVEHEI 88

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
                                   +  V + +  +R     L   I +D+  +T +    
Sbjct: 89  DKKLDIKGKEDVMKFGLANYNEECRAIVMRYAGEWRKTIGRLGRWIDFDNDYKTLQTSFM 148

Query: 104 DTCRILWKKISDKGDIYKGCYSGWY 128
           ++   +++++  K  +Y+G     Y
Sbjct: 149 ESVWWVFQELYKKDAVYRGHRVMPY 173


>gi|302380674|ref|ZP_07269139.1| leucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311617|gb|EFK93633.1| leucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 802

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 7/188 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++ Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKKRFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  +V  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEVVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G            V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGH----CERCGGQVVRKVKNQWMLKITEYADRLID 204

Query: 179 YYESHPEF 186
             +    F
Sbjct: 205 DLKDVDYF 212



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 130/376 (34%), Gaps = 63/376 (16%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +Y+         +   Y   D V+       Y  +  P+ + E  G+          +L
Sbjct: 398 KMYEYIEEKEIGHKKTNYKLRDWVFSRQ---RYWGEPIPLVYCEHCGWVPLDEKDLPLVL 454

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
              +++          +++  FV +        R                M  W  +   
Sbjct: 455 PKVDNYEPTDNGESPLSKIDDFVHTK--CPKCGRDAVR--------ETDTMPQWAGSSWY 504

Query: 238 YLTTTGYLDNP----DGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLP 285
           YL  T   ++       +   + P D +  G +    H +Y   +         +    P
Sbjct: 505 YLRYTDPHNDEAIASKENLDYYTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEP 564

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             K+      +    EK+SKS GNV++P +++ + G D LR + +      K   + ++G
Sbjct: 565 YMKRTSHGMILGDNNEKMSKSRGNVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENG 624

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +K            + V R+  ++  D +             E + ++  + ++++ E+ 
Sbjct: 625 VKG------CRKFLDKVWRTQELVDGDSNF------------EKMETLIHQTIKKVSEDY 666

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +N   + A+AQ+++L++E +          L K + ++            +   ILL   
Sbjct: 667 ENLKFNTAIAQLMTLLNEFNN---------LDKISKEQ-----------YKIFLILLNPV 706

Query: 466 VPKLANKIFDILFVAD 481
            P +  +I+  +    
Sbjct: 707 CPHITEEIWQRMGYEG 722


>gi|323484490|ref|ZP_08089856.1| hypothetical protein HMPREF9474_01607 [Clostridium symbiosum
           WAL-14163]
 gi|323692551|ref|ZP_08106784.1| leucine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323402268|gb|EGA94600.1| hypothetical protein HMPREF9474_01607 [Clostridium symbiosum
           WAL-14163]
 gi|323503417|gb|EGB19246.1| leucine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 803

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+  L G  V+   G D  G      
Sbjct: 28  KKEKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYQLLKGKYVIHPMGWDAFGLPAENY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +   +N +N +           +D  + TT+   +   + ++ ++  KG  
Sbjct: 88  AIKMGVHPAISTAENVKNIKRQIGEIAAIYDWDMEVNTTDPGFYKWTQWIFVQMFKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY ++LL+ 
Sbjct: 148 YEKEFPINWCPSCKTGLANEEVVNG----CCERCGTTVTKKNLRQWMLKITAYAERLLND 203

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 204 LDKLDWPEKVKKMQTDWI 221



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 122/346 (35%), Gaps = 56/346 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+      +   K      + + ++   GI 
Sbjct: 413 YKLRDWVFSRQRYWGEPIPIIHCPNCGNVPVPEDQLPLELPKVESYQPTGTGESPLAGID 472

Query: 220 IPDD------------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
              +                M  W         Y+ +    +     KA  + P D+++ 
Sbjct: 473 EWVNTTCPCCGAPAKRETNTMPQWAGSSWYFLRYVDSKNNEELVSREKADKYLPVDMYIG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 533 GVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPDD 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D+LR + +       D  +D  G++         G+   ++R  ++++ + D 
Sbjct: 593 LVRDYGCDSLRLYELFVGPPELDAEWDDRGIE---------GVSRFLNRFYNLVMDNKDK 643

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
            +       E+ + ++ +  +++ +I +  +   ++  ++  +      ++  D  K   
Sbjct: 644 EV-------EATKEMIKIRHKLVFDIEQRFEQFSLNTVISGFMEYN---NKLIDLAK--- 690

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K+   DR         E +R   +LL  F P L  +++  L   D
Sbjct: 691 -KEGGIDR---------ETLRTFTVLLAPFAPHLGEELWQALGGTD 726


>gi|145630904|ref|ZP_01786681.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
 gi|144983564|gb|EDJ91032.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
          Length = 254

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 84/243 (34%), Gaps = 9/243 (3%)

Query: 1   MKERE-KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I 
Sbjct: 1   MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I
Sbjct: 61  LNADKLGITPEELIAKAKADHVRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFI 120

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                S  +      +  D  V           Q+        +      S Y    L  
Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYG-------DNCEVCASTYSPMDLIN 173

Query: 180 YESHPEFILPIERRNEVISFVKSGLKD-LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             S      P+ + +E   F     +  L        + +K+    +  + V  +    +
Sbjct: 174 PRSAVSGATPVVKESEHFFFDLPAFEGMLKNGHVLAHFNLKLRTKCKNGLRVVYNNGIFH 233

Query: 239 LTT 241
           +  
Sbjct: 234 VMH 236


>gi|62088048|dbj|BAD92471.1| Isoleucyl-tRNA synthetase, cytoplasmic variant [Homo sapiens]
          Length = 1279

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 366 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 418

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 419 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 478

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 479 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 535

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 536 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 595

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 596 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 655

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 656 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 715

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 716 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 775

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 776 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 815



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 53  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 112

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 113 IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 172

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 173 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 216


>gi|440799|gb|AAA80153.1| isoleucyl-tRNA synthetase [Homo sapiens]
          Length = 1262

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 349 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 759 FSVLLSLCRLIAPYTPFLTELMYQNLKVLIDPVSVQDKDT 798



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|229548742|ref|ZP_04437467.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255973878|ref|ZP_05424464.1| leucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617686|ref|ZP_05474532.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761563|ref|ZP_05502143.1| leucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256959928|ref|ZP_05564099.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964366|ref|ZP_05568537.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257081058|ref|ZP_05575419.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257083719|ref|ZP_05578080.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257089228|ref|ZP_05583589.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418403|ref|ZP_05595397.1| leucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293383508|ref|ZP_06629419.1| leucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293386666|ref|ZP_06631240.1| leucine--tRNA ligase [Enterococcus faecalis S613]
 gi|307271410|ref|ZP_07552684.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307284366|ref|ZP_07564531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289503|ref|ZP_07569449.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312901661|ref|ZP_07760931.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312905044|ref|ZP_07764169.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312907126|ref|ZP_07766119.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312951828|ref|ZP_07770719.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312979295|ref|ZP_07790993.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|229306135|gb|EEN72131.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255966750|gb|EET97372.1| leucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597213|gb|EEU16389.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682814|gb|EEU22509.1| leucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256950424|gb|EEU67056.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954862|gb|EEU71494.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256989088|gb|EEU76390.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256991749|gb|EEU79051.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256998040|gb|EEU84560.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160231|gb|EEU90191.1| leucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079142|gb|EFE16506.1| leucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083883|gb|EFE20846.1| leucine--tRNA ligase [Enterococcus faecalis S613]
 gi|306499521|gb|EFM68892.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306503306|gb|EFM72558.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306511905|gb|EFM80901.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|310626903|gb|EFQ10186.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310630231|gb|EFQ13514.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310631623|gb|EFQ14906.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311287889|gb|EFQ66445.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291272|gb|EFQ69828.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315145192|gb|EFT89208.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315154255|gb|EFT98271.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315154872|gb|EFT98888.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315164608|gb|EFU08625.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315166992|gb|EFU11009.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170867|gb|EFU14884.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315576576|gb|EFU88767.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|327534387|gb|AEA93221.1| leucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|167756746|ref|ZP_02428873.1| hypothetical protein CLORAM_02293 [Clostridium ramosum DSM 1402]
 gi|167702921|gb|EDS17500.1| hypothetical protein CLORAM_02293 [Clostridium ramosum DSM 1402]
          Length = 798

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKYYCVDMFPYPSGNGLHVGHPEGYTATDIVSRMKRMQGYNVLHPMGFDSFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N   F+     L  SY  D  I T++  ++   + ++ K+ D G  
Sbjct: 90  AIQTGHHPAEFTKKNIEVFKGQIKSLGFSYDWDREIATSDPEYYKWTQWIFTKLYDAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +A   ++EV  G           PV       +  +++ Y ++LL  
Sbjct: 150 YVDEIPVNWCPELKAVLANEEVIDGKS----ERGGYPVIRKPMRQWVLKITEYAERLLED 205

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 206 LDDLDWPEATKQMQRNWI 223



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 132/436 (30%), Gaps = 62/436 (14%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  +I   +    TE   H   + L   +
Sbjct: 331 YGTGAIMAVPAHDDRDWEFAKKFGIEIIPVLEGGNI---EEAAYTEDGLHINSQWL-DGL 386

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME---EEGYFFRLS 170
             +  I K           E   +          Q Y  +  P+  ME            
Sbjct: 387 GKQEAIDKMIAWLEEHKCGEKKISYKLRDWLFSRQRYWGEPIPIVHMEDGTMRTVPVEEL 446

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +      ++ H     P+    + +     G K    +     W        +YI   
Sbjct: 447 PLELPATKNFQPHDSGESPLANCEDWLEVEIDGQKGRRETNTMPQWAGSCWYYIRYI--- 503

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSA 282
                         +        K+ P DL+V G +    H +Y   +         +  
Sbjct: 504 --------DPHNSEVICDPKLLEKWLPVDLYVGGAEHAVLHLLYSRFWHKVLYDAGVVKC 555

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  +       +    EK+SKS GNV++P +++   G D+LR + +          + 
Sbjct: 556 KEPWQRLFHQGMILGDNNEKMSKSRGNVVNPDDIVASHGADSLRLYEMFMGPLEAALPWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +GL         +G    + R   + ++             E+D S+  V  + ++++ 
Sbjct: 616 TNGL---------DGSRKWLDRVYRLFIE-------QDKLSDENDHSLDRVYHQTVKKVT 659

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ +    + A++Q++  ++E  +                 A TV     E       +L
Sbjct: 660 DDFETLGFNTAISQMMIFINECYK-----------------AETVYK---EYAFNFIKML 699

Query: 463 QAFVPKLANKIFDILF 478
               P +  +++ +L 
Sbjct: 700 SCIAPHICEEMWQMLG 715


>gi|156603749|ref|XP_001618894.1| hypothetical protein NEMVEDRAFT_v1g152996 [Nematostella vectensis]
 gi|156200817|gb|EDO26794.1| predicted protein [Nematostella vectensis]
          Length = 673

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 119/327 (36%), Gaps = 15/327 (4%)

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           F + +    +              +  N +      +  L+     +             
Sbjct: 315 FVVRSPDWCISRQLSWGQRIPAWYDSENTIYVGKTEEEALEQYKKQKPELAAQKPELRQD 374

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLS 281
           + ++  W  +    +   G+ +NPD  + K++ P    V   +I+ F    +    +   
Sbjct: 375 EDVLDTWFSSWLWPMQVFGWNENPDNEELKYYYPTKTLVTAPEIIFFWVARMAMAGYEYL 434

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  K  F+      +G K+SK LGN  D + +IEE G DA+R+ ++     G D  Y
Sbjct: 435 GQKPFDKVYFTGIVRDKQGRKMSKQLGNSPDLLALIEEHGADAVRFSVMISSPAGNDLLY 494

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  L++    + +N + N +   +    +         G    + + +    ++  Q+I
Sbjct: 495 DESSLEQ--GRNFSNKMWNALK--LIKSWEGRTTKDVAIGEQQFAVDWMEQRVAKASQQI 550

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
            E M++  +   L  + SL+ +     Y +    W         +  +   TV    QL 
Sbjct: 551 EELMKDFRLSEGLKTIYSLIWDDFCSWYLE----WVKPAQEASMSQELYERTVATFEQLL 606

Query: 460 ILLQAFVPKLANKIFDILFVADENRCF 486
            LL  ++P +  +++ ++    +    
Sbjct: 607 QLLHPYMPFVTEEMYHLMNERKDGDDL 633



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +           H+GHA    + D+L R  ++ G +  +  GTD          
Sbjct: 32  ERPSYTVVIPPPNVTGVLHMGHALNDTVQDILVRRAKMQGYNTCWVPGTDHASIATEAKV 91

Query: 63  QNAGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
            N                       + ++           L   + ++    T +  ++ 
Sbjct: 92  VNMLKERGIDKNALSREEFLEYAWEWKEKYGGIILQQLKKLGCALDWNRTHFTMDDEYYA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++  + +KG IY+G     +  + +   +D+EV  
Sbjct: 152 AVIRVFVDLYNKGQIYRGVKMINWDPKAKTALSDEEVIH 190


>gi|167755754|ref|ZP_02427881.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
 gi|167704693|gb|EDS19272.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
          Length = 901

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 144/447 (32%), Gaps = 33/447 (7%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
              DEHG  +    +        +VD  ++      D L +       T           
Sbjct: 337 CNVDEHGCMMKDCGEWLEG---QYVDDANKTVTMKLDELGVLLKLEFITHS------YPH 387

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            W+            +        E   ++ +     +   +   +N ++   +     +
Sbjct: 388 DWRTKKPIIFRATDQWFCSVDKIREKLLSEIDKVNWLNEWGHIRIYNMIKDRGDWCISRQ 447

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQY 226
            S      + Y E     +     ++    F K G        +      G      P  
Sbjct: 448 RSWGVPIPIIYCEDGTPIMEEEVFKHISNLFRKYGSNVWFERDEKDLLPEGYINEHSPNG 507

Query: 227 I-------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           I       M VW D+ +++             +   +P DL+  G D     F++     
Sbjct: 508 IFKKEKDIMDVWFDSGSSHTGCMI-------ERGYRYPVDLYFEGSDQYRGWFNSSLIVG 560

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P    +     +  KG K+SKSLGN +DPI+++ + G D +R +    +A  +
Sbjct: 561 TAAHGCAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVNQYGADIVRLW-ATSVAYQQ 619

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D     D +K+   ++    I N +   +  +       +    A  + D+ +L+  + +
Sbjct: 620 DVRISNDIMKQI--SENYRKIRNTMRFVLGNLNDFKQADLVAVEALADVDKYMLAQLNDL 677

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
           ++   +   N     A   +++  + +    Y D  K    ++K +  R   V  V    
Sbjct: 678 IKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKDILYIEKADSLRRRQVQTVLYYH 737

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  L+   +   A ++ D     D
Sbjct: 738 AKAMMKLISPVLVFTAEELHDHFHCDD 764



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E         Y N   H+GH    +I DV+ R++ ++G    +  G D HG  I  A
Sbjct: 37  KGKEDFVFHDGPPYANGNMHMGHMLNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIENA 96

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
            Q  GV  K             +  +      +    +    D      T          
Sbjct: 97  IQKLGVNRKEMSTAAFREKCDEYAHEQVNKQMEQLIRMGTFADYKHPYLTLMPEFEANQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K++  G I+KG    ++S   E+   + E+   
Sbjct: 157 DVFAKMAMDGLIFKGLKPVYWSPSSESALAEAEIEYH 193


>gi|317968656|ref|ZP_07970046.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 984

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 117/310 (37%), Gaps = 27/310 (8%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD-NPDGSKAK 254
                ++GL   + + +   W           M VW D+ +++    G ++     +   
Sbjct: 537 WWERDEAGLLPETYAAEASQW-----RKGTDTMDVWFDSGSSWAGVLGGIEGTSSRAPQL 591

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PADL++ G D     F +    +  ++ + P  + +     +  KG K+SKSLGNV+D
Sbjct: 592 HYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKRVLTHGFTLDEKGRKMSKSLGNVVD 651

Query: 313 P---------IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           P          +     G D LR ++   +    D       +K+   AD+   + N   
Sbjct: 652 PAVLVSGGKNQKQEPPYGADVLRLWV-SSVDYSADVPLGPGIVKQL--ADVYRKVRNTA- 707

Query: 364 RSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL- 420
           R +   L D+D              D+ +L   + ++  +  + +    +R    + +  
Sbjct: 708 RYLLGNLHDFDPSKDAIPYEELPLLDQWMLQRTASLIDSVSGDFERYEFYRFFQALQNFC 767

Query: 421 -VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V   + Y D  K    +   N  R  +   V   V+ +LA L+   +  +A  I+  L 
Sbjct: 768 VVDLSNVYLDIAKDRLYVSGANDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLP 827

Query: 479 VA-DENRCFQ 487
            +  E   F+
Sbjct: 828 YSVAETSVFE 837



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 16/147 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------KAAQNA 65
             Y N   H+GHA   I+ D++ +   L G    F  G D HG  I        K+++ A
Sbjct: 70  PPYANGALHVGHALNKILKDIINKTALLQGKRARFVPGWDCHGLPIELKVLQGLKSSERA 129

Query: 66  GVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
            +T          +  +     +       I   +D    T +K +      ++  +   
Sbjct: 130 ELTPVSLRKKAHAYALEQVEGQKAGFRRWGIWADWDQPYLTLQKDYEAAQIGVFGAMVLA 189

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           G IY+G     +S        + E+  
Sbjct: 190 GHIYRGLKPVHWSPSSRTALAEAELEY 216


>gi|327310520|ref|YP_004337417.1| isoleucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946999|gb|AEA12105.1| isoleucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 959

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 74/415 (17%), Positives = 153/415 (36%), Gaps = 25/415 (6%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           +   K    + ++Y+             Y  DD V    D     ++     W      +
Sbjct: 391 QWFIKMSKIREEMYEELKKVKIYPEKLRYRFDDFVKNARDWNISRSRF----WGTPLPIW 446

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
                 +  ++   +        +   ++     +  +  + +S    D  ++      Y
Sbjct: 447 RCQKDGRILVIGSIDELKSLAKKLPPVDDFWLVHRPWIDQVEISTPDCDRWVR----EPY 502

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW+D+   ++       N D  +A  +P        D     F+++   + + +   
Sbjct: 503 VADVWMDSGIAWIAAVDGERNRDLWEAL-YPFTWVTEAIDQTRGWFYSLLATSMVYTGRA 561

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +  +G+K+SKS GNV+   +++ + G D  R +L+ + A  +   +D D
Sbjct: 562 PYKSILITGHILDKEGQKMSKSKGNVVWAKDLLSKYGADPTRLYLLTKAAPWEALNFDPD 621

Query: 345 GLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQ 399
            +K        N + N+V  +   M L  +D              + D+ +LS  S + +
Sbjct: 622 EIK--YAVSQLNILWNVVKFADTYMSLDGFDPRRHRLEELLGKALDEDKWLLSAASSLAR 679

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQ 457
            + E+M+   IH A    +  V E +   +       +    P +       V  +V++ 
Sbjct: 680 RVAEHMEAFEIHEAAKAWVDFVVETLSHRYVRLLRRRVWSEEPREDKYAAYAVLFKVLKD 739

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQS--LDQRLKPGFM---LHKTFDPIF 507
           + I+   FVP +A  ++       E    +S  L Q  +PG +   L K FD IF
Sbjct: 740 VLIIGGIFVPHIAEYLWQNFVRKYEPDAAESVHLAQYPEPGPVDEELLKAFDEIF 794



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 20/161 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++          N  PH+GH       DV+ RF R  G  V    G D  G  +    + 
Sbjct: 16  KRFTFLEGPPTTNGFPHVGHIRGRTYKDVVLRFWRSRGYSVWAQGGWDMQGLPVELEVEQ 75

Query: 65  AG-------------VTTKVFVDQNSRNFRDMADVLD-------ISYDDFIRTTEKRHHD 104
                                 ++    +    +          +   +  +T   R+ +
Sbjct: 76  RQGLKSKKDIEKFGVAKFAEECNKLVDYYLAFWEEWGTRRLGLWLDLKNAYQTRSPRYIE 135

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
               L K+  ++G + +     W+  R E   +D EV  G 
Sbjct: 136 YAWRLIKRAHERGLLAEDYKVLWFCPRCETSLSDHEVDLGY 176


>gi|315151630|gb|EFT95646.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|237734721|ref|ZP_04565202.1| isoleucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382049|gb|EEO32140.1| isoleucyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 909

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 144/447 (32%), Gaps = 33/447 (7%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
              DEHG  +    +        +VD  ++      D L +       T           
Sbjct: 345 CNVDEHGCMMKDCGEWLEG---QYVDDANKTVTMKLDELGVLLKLEFITHS------YPH 395

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            W+            +        E   ++ +     +   +   +N ++   +     +
Sbjct: 396 DWRTKKPIIFRATDQWFCSVDKIREKLLSEIDKVNWLNEWGHIRIYNMIKDRGDWCISRQ 455

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKIPDDPQY 226
            S      + Y E     +     ++    F K G        +      G      P  
Sbjct: 456 RSWGVPIPIIYCEDGTPIMEEEVFKHISNLFRKYGSNVWFERDEKDLLPEGYINEHSPNG 515

Query: 227 I-------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           I       M VW D+ +++             +   +P DL+  G D     F++     
Sbjct: 516 IFKKEKDIMDVWFDSGSSHTGCMI-------ERGYRYPVDLYFEGSDQYRGWFNSSLIVG 568

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P    +     +  KG K+SKSLGN +DPI+++ + G D +R +    +A  +
Sbjct: 569 TAAHGCAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVNQYGADIVRLW-ATSVAYQQ 627

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D     D +K+   ++    I N +   +  +       +    A  + D+ +L+  + +
Sbjct: 628 DVRISNDIMKQI--SENYRKIRNTMRFVLGNLNDFKQADLVAVEALADVDKYMLAQLNDL 685

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
           ++   +   N     A   +++  + +    Y D  K    ++K +  R   V  V    
Sbjct: 686 IKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKDILYIEKADSLRRRQVQTVLYYH 745

Query: 455 IRQLAILLQAFVPKLANKIFDILFVAD 481
            + +  L+   +   A ++ D     D
Sbjct: 746 AKAMMKLISPVLVFTAEELHDHFHCDD 772



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +E         Y N   H+GH    +I DV+ R++ ++G    +  G D HG  I  A
Sbjct: 45  KGKEDFVFHDGPPYANGNMHMGHMLNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIENA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
            Q  GV  K             +  +      +    +    D      T          
Sbjct: 105 IQKLGVNRKKMSTAAFREKCDEYAHEQVNKQMEQLIRMGTFADYKHPYLTLMPEFEANQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K++  G I+KG    ++S   E+   + E+   
Sbjct: 165 DVFAKMAMDGLIFKGLKPVYWSPSSESALAEAEIEYH 201


>gi|228917671|ref|ZP_04081212.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228841908|gb|EEM87014.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 245

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 26/242 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   H+GH   ++  D+LAR++R  G +VL+ +G+D +G  IA  A+  G
Sbjct: 3   IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           VT K   ++    F      L  +YD + RT  + HH+T + ++ ++ ++  IYK     
Sbjct: 63  VTAKEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQKVFLRLLEEEHIYKKTVEQ 122

Query: 127 WYSLRDEAYYNDDEVY----------KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y      +  D  V           +G      +A  +P+  +E++      +    + 
Sbjct: 123 AYCETCMQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCKLCGSTPSIQET 182

Query: 177 LSYYESHPEFILPIERRNEV---------------ISFVKSGLKDLSLSRKTFDWGIKIP 221
             +Y +   F   I+R  E+                 +VK GL D ++SR     G+ IP
Sbjct: 183 EHFYFALHTFQEQIKRAVEIAKQTGTWRDNAIQLTERYVKEGLLDRAVSRD-LPIGVPIP 241

Query: 222 DD 223
            +
Sbjct: 242 VE 243


>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 803

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 450 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 509

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 510 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 564 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 622

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 623 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 677 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 737 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 789



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 47  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 106

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 107 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 167 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 216


>gi|227554917|ref|ZP_03984964.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175943|gb|EEI56915.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315573422|gb|EFU85613.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581340|gb|EFU93531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 136/415 (32%), Gaps = 62/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                               V  +  E +     LL    P +  +++ IL   +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILGNEE 740


>gi|169824320|ref|YP_001691931.1| leucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|238687733|sp|B0S101|SYL_FINM2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167831125|dbj|BAG08041.1| leucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 802

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 7/188 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++ Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKKRFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  +V  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEVVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G            V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGH----CERCGGQVVRKVKNQWMLKITEYADRLID 204

Query: 179 YYESHPEF 186
             +    F
Sbjct: 205 DLKDVDYF 212



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 130/376 (34%), Gaps = 63/376 (16%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +Y+         +   Y   D V+       Y  +  P+ + E  G+          +L
Sbjct: 398 KMYEYIEEKEIGHKKTNYKLRDWVFSRQ---RYWGEPIPLVYCEHCGWVPLDEKDLPLVL 454

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
              +++          +++  FV +        R                M  W  +   
Sbjct: 455 PKVDNYEPTDNGESPLSKIDDFVHTK--CPKCGRDAVR--------ETDTMPQWAGSSWY 504

Query: 238 YLTTTGYLDNP----DGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLP 285
           YL  T   ++       +   + P D +  G +    H +Y   +         +    P
Sbjct: 505 YLRYTDPHNDEAIASKENLDYYTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEP 564

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             K+      +    EK+SKS GNV++P +++ + G D LR + +      K   + ++G
Sbjct: 565 YMKRTSHGMILGDNNEKMSKSRGNVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENG 624

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +K            + V R+  ++  D +             E + ++  + ++++ E+ 
Sbjct: 625 VKG------CRKFLDKVWRTQDLVDGDSNF------------EKMETLIHQTIKKVSEDY 666

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +N   + A+AQ+++L++E +          L K + ++            +   ILL   
Sbjct: 667 ENLKFNTAIAQLMTLLNEFNN---------LDKISKEQ-----------FKIFLILLNPV 706

Query: 466 VPKLANKIFDILFVAD 481
            P +  +I+  +    
Sbjct: 707 CPHITEEIWQRMGYEG 722


>gi|257415369|ref|ZP_05592363.1| leucyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157197|gb|EEU87157.1| leucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 136/415 (32%), Gaps = 62/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                               V  +  E +     LL    P +  +++ IL   +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILGNEE 740


>gi|71893995|ref|YP_279441.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852122|gb|AAZ44730.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 790

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 4/206 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             R+K YI     YP+A   H+GH      +D++ARF RL+G DVL   G D  G    +
Sbjct: 26  TSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  +N  NF+        SY  D  I T++   +   + ++K +     
Sbjct: 86  YAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+ +  +G   + + N PV   + + +  +++ Y  KLL
Sbjct: 146 AEIREVEVNWCPELGTVLANEELKREKNGALVSERGNFPVILKKMKQWVLKITEYAQKLL 205

Query: 178 SYYESHPEFILPIERRNEVISFVKSG 203
              +           + + I   K  
Sbjct: 206 DGLDQVDFPDSLKTLQKKWIGKSKGW 231



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 127/373 (34%), Gaps = 54/373 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + E+   +      +           +   P+    + + F K+
Sbjct: 402 WVFSRQRYWGEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKDWVFFEKN 461

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G      +     W         +I+      L                  K+ P DL++
Sbjct: 462 GKYYRRETNTMPQWSGSSWYYLAFILKEKDKYL------PLDSKIAYDKFKKWLPVDLYI 515

Query: 263 IGKDIL--------RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++           +H + + A ++  + P  K +     +   G+K+SKS GN I+P 
Sbjct: 516 GGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKIIHQGMLLGSDGQKMSKSKGNTINPT 575

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I++ G D +R FL+     G    +D++G+           I N + R    IL DY 
Sbjct: 576 EIIDKFGADTIRIFLMFMGPIGDLRLWDENGVVS---------IFNWIQRVQRTILADY- 625

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                     E D       +  + EI   ++    + A+++++  ++ +++        
Sbjct: 626 ----KIDPELEKDYEFTYFFNNFVFEITNLIETFKFNVAISKLMVYINFLNK-------- 673

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                       +       +    I+   F P  A ++ + L         + L+ ++ 
Sbjct: 674 ---------KQKIPS--KNYLTDFLIIFSVFAPHTAEELLEKLGQ-------KPLNFQIW 715

Query: 495 PGFMLHKTFDPIF 507
           P F   K F   F
Sbjct: 716 PQFDRSKIFKNTF 728


>gi|56460236|ref|YP_155517.1| isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821756|sp|Q5QZS6|SYI_IDILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56179246|gb|AAV81968.1| Isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 944

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 130/396 (32%), Gaps = 43/396 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYN----AQHNPVQWMEEEGYFFR 168
               + Y+  Y   +  +    +    + +   D +        Q   V W  E G    
Sbjct: 401 LMHAESYRHSYPHCWRHKTPIIFRATPQWFISMDKKGLRAGALEQIKKVDWFPEWGQSRI 460

Query: 169 LSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            S  + +          +  P    + R  E +      L +  +++     G++   D 
Sbjct: 461 ESMVEGRPDWCISRQRTWGNPIAIFVNRETEELHPNTLELME-KVAQLIEKDGVQAWFDL 519

Query: 225 Q----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
           +                  + VW D+   +                 WPADL++ G D  
Sbjct: 520 EPETLLGDEADKYRKVTDTLDVWFDSGVTHHCVLREF------DGLRWPADLYLEGSDQH 573

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F +       +    P  + +     +  +G K+SKS+GNV+ P +V+ ++G D LR
Sbjct: 574 RGWFQSSLVTGVAMYDEAPYHQVLTHGFTVDAQGRKMSKSIGNVVAPQDVMNKLGGDILR 633

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFT 384
            ++      G+    D+     + +AD    I N  SR +   L  +D            
Sbjct: 634 LWVASADYSGEMTVSDE---ILKRSADAYRRIRNT-SRFLLANLSGFDPKQDLVAKEDMV 689

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNP 441
           E D  I+   + +  E+ E   N   H  + +++   S      Y D  K  +   K+  
Sbjct: 690 ELDRWIVGRAADLQNELLEAYNNYQFHSVVQKLMHFCSIELGSFYLDIIKDRQYTAKSEG 749

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +       +   L   +       A +I+D+L
Sbjct: 750 LARRSCQTALYHIAEALVRWMAPICSFTAQEIWDLL 785



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 70/239 (29%), Gaps = 18/239 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K  +     Y N Q HIGHA   I+ DV+ +   L   D  +  G D HG  I    
Sbjct: 47  GKPKFILHDGPPYANGQIHIGHAVNKILKDVIVKAKTLSDFDAPYVPGWDCHGLPIELQV 106

Query: 63  QNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +        R     L +   +D+   T   +      
Sbjct: 107 EKKHGKPGKKLNLAEFREKCREYAMTQIDQQRTDFKRLGVLGDWDNPYLTMNFKQEADSV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               KI D G +++G     +     +   + EV              PV    E    F
Sbjct: 167 RALAKIIDNGHMHQGFKPVHWCTDCGSALAEAEVEYQDKNSPAIDVRMPVAATAETVDRF 226

Query: 168 RLSA---YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
                   +  +     +   + +P  R   +   ++  L  +  S       + + DD
Sbjct: 227 STPEGHVGEGNVSMVIWTTTPWTIPANRAVTLAEGLEYTLVQVEASDDQPAERVILADD 285


>gi|190689867|gb|ACE86708.1| isoleucyl-tRNA synthetase protein [synthetic construct]
 gi|190691237|gb|ACE87393.1| isoleucyl-tRNA synthetase protein [synthetic construct]
          Length = 1262

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 349 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQSRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 798



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|66817142|ref|XP_642469.1| valyl tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74861616|sp|Q86KU2|SYVC_DICDI RecName: Full=Probable valyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Valine--tRNA ligase; Short=ValRS
 gi|60470561|gb|EAL68540.1| valyl tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1072

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/426 (15%), Positives = 125/426 (29%), Gaps = 60/426 (14%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME----EEGYFFR 168
            S   D+ +      + ++ +                   + + V W       + +   
Sbjct: 470 CSRSKDVIEPMIKPQWYVKCDDMAARAVKAVRDGDLKITPKTHEVTWYRWLEGIKDWCVS 529

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK-----IPDD 223
              +    +  Y    + +              +  +    + + F    K     +  D
Sbjct: 530 RQLWWGHRIPAYHCIIKGVKSNPYDTNQWVVGANQEEATQNAIEKFKLSSKDDILSLEQD 589

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +  G+ +        ++P  L   G DIL F    +      L+
Sbjct: 590 PD-VLDTWFSSGLFPFSVMGWPEQTQ-DMQDYYPTSLLETGSDILFFWVARMVMMGQQLT 647

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE----------------------- 318
             LP  +           G K+SKSLGNVIDP +VI+                       
Sbjct: 648 GKLPFEQVFLHAMVRDSHGRKMSKSLGNVIDPNDVIKGISLDELIAKLYEGNLDSKEIEK 707

Query: 319 --------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DA+R+ L    + G+D   D   +      +  N I N    
Sbjct: 708 ATSGVKSDFPTGIAECGTDAMRFALCAYTSQGRDINLDIQRVVG--YRNFCNKIWNATRF 765

Query: 365 SVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +   +   +                 +  IL+   R +    E  +     +    + S 
Sbjct: 766 AHMKLGDSFKPESFDASKLLQQSNAINLWILNAAQRAITLSEEGFKEYDFSKVTTAIYSF 825

Query: 421 V--SEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 D Y +  K  + L++ +P +  T        I     LL  F+P L  +++  L
Sbjct: 826 WLNEMCDVYLEMTKSIFSLEEDSPIKQKT-KETLYTCIDIGLRLLHPFMPYLTEELYQSL 884

Query: 478 FVADEN 483
               E+
Sbjct: 885 PRRPED 890



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +K  I           H+GHA    I D + R+HR+ G   L+  GTD  G       
Sbjct: 140 KDKKFVIVIPPPNVTGSLHLGHALTNSIQDAVVRYHRMKGEVCLWVPGTDHAGIATQVVV 199

Query: 63  QNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
           +                         +  +     +     +  S D    + T + +  
Sbjct: 200 EKKIWKENKITRHDLGREGFIKKVWEWKGEYGARIQGQLKKMGSSVDWSREVFTMDDQRS 259

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + ++ + G I +      +S   +   +D EV  
Sbjct: 260 KAVNTAFIRMFNDGLIVRTTRLVNWSCALKTAISDIEVDF 299


>gi|255971258|ref|ZP_05421844.1| leucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255962276|gb|EET94752.1| leucyl-tRNA synthetase [Enterococcus faecalis T1]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIEGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|229546656|ref|ZP_04435381.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|307276217|ref|ZP_07557347.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307296175|ref|ZP_07576005.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229308223|gb|EEN74210.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|306496149|gb|EFM65729.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306507129|gb|EFM76269.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315030502|gb|EFT42434.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315159956|gb|EFU03973.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 820

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|83765559|dbj|BAE55702.1| unnamed protein product [Aspergillus oryzae]
          Length = 1078

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 68/434 (15%), Positives = 128/434 (29%), Gaps = 95/434 (21%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            E        +           ++ ++ + +  ++ ++ +     +   E     I P  
Sbjct: 461 KENGLYVKWEHNPMKIPRCAKSNDVIEPILKPQWWMKMESLAKPAIEAVEKGDIVIKPES 520

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG---------------------------------- 217
              +        + D  LSR+   WG                                  
Sbjct: 521 A-EKSYFRWMRNINDWCLSRQ-LWWGHQAPAYFVKIEGEENDDSDGNLWVTGRTEEEARK 578

Query: 218 ----------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                       +  DP  ++  W  +     +T G+ +         +P  +   G DI
Sbjct: 579 KAEAKFPGKKFDLVRDPD-VLDTWFSSGLWPFSTLGWPNKTH-DFENLYPTSVLETGWDI 636

Query: 268 LRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------- 317
           L F    +      L+  +P  ++V+ H  I   +G K+SKSLGNVIDPI+V+       
Sbjct: 637 LFFWVARMIMLGIKLTGQVPF-REVYCHSLIRDSEGRKMSKSLGNVIDPIDVMEGIQLQT 695

Query: 318 ------------------------------EEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                                          E G DALR+ LV     G D  +D   + 
Sbjct: 696 LHDKLLLGNLAEKEVATATKYQKKAFPKGIPECGADALRFALVSYTTGGGDIAFDIQVI- 754

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENM 405
                   N I       +  +  D+         G  + S+  IL   +   +EI E +
Sbjct: 755 -HGYRRFCNKIYQATKYVLGKLGDDFKPQPTVSKTGRESLSERWILHKFNSAAKEINEAL 813

Query: 406 QNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +  +     V         D + +  K     +   D   +        +     L+ 
Sbjct: 814 EQREFNVVATTVYQYWYAQLCDVFIENSKFLLAPEVPADVQESAKQTLYTALEGALTLIH 873

Query: 464 AFVPKLANKIFDIL 477
             +P +  +++  L
Sbjct: 874 PIMPFVTEELWQRL 887



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K R + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 148 KVRPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWQRMKGKTTLWLPGMDHAGISTQ 207

Query: 60  KAAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                         +  +   N ++    +  S+D      T + 
Sbjct: 208 SVVEKMLWKKEKKTRHDLGREVFTDRVWEWKHEYHANIKNALRRVGGSFDWSREAFTMDP 267

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 268 NLSAAVTETFVRLHEEGIIYRANRLVNWC 296


>gi|156056993|ref|XP_001594420.1| hypothetical protein SS1G_04227 [Sclerotinia sclerotiorum 1980]
 gi|154702013|gb|EDO01752.1| hypothetical protein SS1G_04227 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1027

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 121/373 (32%), Gaps = 48/373 (12%)

Query: 157 VQWMEEEG-YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           ++WME    +      +       Y +  E     E   +     ++  +  + ++K   
Sbjct: 476 LRWMENINDWCLSRQLWWGHQAPMYFAQIEGDENDEGNGDRWFAGRTQEEAEAKAKKALS 535

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
                    + ++  W  +      T G+    +    K +P  +   G DIL F    +
Sbjct: 536 GKTFTLKRDEDVLDTWFSSGLWPFATMGWPKKTN-DFEKLYPTSVLETGWDILFFWVARM 594

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV----------- 322
                 ++  +P  +           G K+SKSLGNVIDP +VI+ +G+           
Sbjct: 595 IMFGIKMTGKVPFTEVYCHSLVRDSDGRKMSKSLGNVIDPQDVIQGIGLEDLHAKLLIGN 654

Query: 323 --------------------------DALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                                     DALR+ LV     G D  +D   +         N
Sbjct: 655 LAPAEVEKAKKYQKTAFPDGIPECGTDALRFALVSYTTGGGDIAFDIKVI--HGYRKFCN 712

Query: 357 GIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            I       V  +  D+         G  + S+  IL   +   +EI +N++ +   R+ 
Sbjct: 713 KIYQATKYVVGKLPADFVPQKTAKLTGRESLSERWILHKMTMAAKEINQNLEEREFMRST 772

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
             V         D Y +  K      T  ++ S         +     ++  ++P L  +
Sbjct: 773 TAVYQYWYNQLCDVYIENSKAILQDGTEEEKRSATD-TLYTALEGALTMIHPYMPFLTEE 831

Query: 473 IFDILFVADENRC 485
           ++  L    E++ 
Sbjct: 832 LWQRLPRRPEDKT 844



 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 12/109 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K      I           H+GHA    + D+L R++R+ G   L+  G D  G     
Sbjct: 171 VKPEGSFVIVEPPPNVTGNLHMGHALPNALQDLLIRWNRMHGKTTLWLPGCDHAGISTQS 230

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
                       V +N    R+     D+    F+ T      +  + +
Sbjct: 231 ------------VVENMLWRREQKTRHDLGRPKFVETVWDWKDEYHKKI 267


>gi|145640631|ref|ZP_01796214.1| isoleucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274557|gb|EDK14420.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 941

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 150/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L+ L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLELLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++      +E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKHDLVKPEEMISLDRWAVACALDAQKE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGSIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAVIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|227535647|ref|ZP_03965696.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227186777|gb|EEI66844.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 803

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY +KLL+ 
Sbjct: 149 YEAEVPVNWSPNLGTVVANEEVIDGKTERGGF----PVVRKPMRQWMLKITAYAEKLLTD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 205 LDDLDWPESIKQMQRNWI 222



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 132/412 (32%), Gaps = 63/412 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + R +   +      K + + G++ +  Y+G     +  + +    +   D      + 
Sbjct: 341 HDDRDYAFAKKFGIEIKPVIEGGNVDEAAYTGDGVHINSGFLDGLNEHDAIDRMIKWLED 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
             +       +   + F    Y  + +                     LP E   +    
Sbjct: 401 KGIGSAKINYKLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLTLPEEADIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF 255
            +S L +L+      D   +        M  W    + Y        N     D  K K 
Sbjct: 461 GESPLANLTDWVNVVDKNGRKGKRETNTMPQWA-GSSWYFLRFVDPHNKEALADYDKLKA 519

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P DL++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 520 WMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGAIPNKEPFQRLFNQGMILGDNHEKMSKS 579

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D LR + +          +   GL          G    + R  
Sbjct: 580 KGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGL---------AGARKFLDRVW 630

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S  + D   +       T +D  +  V +  ++++ E+      + A++Q++  ++    
Sbjct: 631 SAFIDDEGKLRDRIT--TINDGRLDKVYNETVKKVTEDYDALHFNTAISQMMVFINSA-- 686

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +K +         + +E +     +L    P L  +I+  L 
Sbjct: 687 ----------RKDDD--------LPLEYVEGFVKMLAPIAPHLMEEIWSRLG 720


>gi|206579966|ref|YP_002240526.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|254782412|sp|B5Y235|SYI_KLEP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|206569024|gb|ACI10800.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 938

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 500

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 669 FDPAKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQN------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            +          T   F  +      +  D       DFIR
Sbjct: 106 VEQQYGKPGEKFTAAEFRSKCREYAAEQIDG---QRKDFIR 143


>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 805

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 136/353 (38%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D LK+         +   +  +   +L + D   P+  A       E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAVQ 787



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|153806381|ref|ZP_01959049.1| hypothetical protein BACCAC_00644 [Bacteroides caccae ATCC 43185]
 gi|149131058|gb|EDM22264.1| hypothetical protein BACCAC_00644 [Bacteroides caccae ATCC 43185]
          Length = 1162

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 107/304 (35%), Gaps = 13/304 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P E   E    +      +         G  +  +   ++ VW D+         Y  
Sbjct: 592 FVPGEYTEENYDKIDLHRPYVDDIILVSKDGQPMKRESD-LIDVWFDSGAMPYAQIHYPF 650

Query: 247 NPDGSKA--KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKELLDSRQVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK L N +DP   IE+ G D LR++++   +   +  +D +G+++              
Sbjct: 711 MSKRLNNAVDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGVEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  ILSV + +++E+          +A   +   
Sbjct: 771 FFALYANVDGFEYKEADVPMAERPEIDRWILSVLNTLIKEVDTCYNEYEPTKAGRLISDF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           V++   + Y   + ++ W           +        +  +A L+    P  A++++  
Sbjct: 831 VNDNLSNWYVRLNRKRFW--GGEFTQDKLSAYQTLYTCLETVAKLMAPISPFYADRLYTD 888

Query: 477 LFVA 480
           L  A
Sbjct: 889 LITA 892



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTT 98
           +  + + A   TK  +                  + ++ + D+   +   +       T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHQMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLYKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTVVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMTEWGTPYFIAWTTTPW 239


>gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 921

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 134/351 (38%), Gaps = 34/351 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++       ++         PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERNDLQR------PADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAIAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEA 785



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|315173068|gb|EFU17085.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 820

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 69/442 (15%), Positives = 146/442 (33%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + D M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEDKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|269958742|ref|YP_003328529.1| isoleucyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848571|gb|ACZ49215.1| isoleucyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 1107

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 76/468 (16%), Positives = 151/468 (32%), Gaps = 42/468 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               D+ G+  A  +  AG      VD   +  ++            SY    RT     
Sbjct: 367 ICPMDDEGKFTAAVSDFAGQHVFDTVDAVIQQLKEKGLWFATEQYTHSYPHCWRTDTPLV 426

Query: 103 HDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      +    K  +   ++ +        ++   +    +  K      +     PV 
Sbjct: 427 YRAMSSWYVEVTKLKARMVELNREVNWVPEHVQSGQFGKWLDGAKDWSVSRHRFWGAPVP 486

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD--- 215
             + +   +  +              + +LP  R  E        L    +   T     
Sbjct: 487 VWQSDDPKYPRTD--------VYGSIKKVLPDVRALEEDFGPVEDLHRPHIDNLTRPNPD 538

Query: 216 --WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGKDILRFH 271
              G  +      ++  W ++ +       Y           +PAD     I +    F+
Sbjct: 539 DPTGKSMMRRVPDVLDCWFESGSMPYAQVHYPFENKEFFDSNFPADFITEYIAQTRGWFY 598

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  +  L    P    +     +  KG+K+SK L N  DP+E+ E+ G D++R+ ++ 
Sbjct: 599 TLFVLSTGLFDRHPFKNCICHGVVLDVKGQKLSKRLNNYPDPMEMFEKYGADSVRFTMLS 658

Query: 332 -EIACGKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDY---DGMIPTPGAFTES 386
             ++ G D   D+D  + +     +   I N  S        D      +    G     
Sbjct: 659 HAVSTGGDLLLDQDGDIIRDTLKSVVKPIWNSYSFFTVYANSDQIKGRILESLEGVTNIM 718

Query: 387 DESILSVCSRVLQEIRENMQN--------QLIHRALAQVISLVSEV-DRYF--DAQKPWE 435
           D+ IL  C+R++ E+ E M++          +  A A ++    ++ + Y      + W 
Sbjct: 719 DQYILYECARMVAEVLEAMESNSAAVKDPYNVRLACAAIVQFSDKLNNWYIRGCRGRFWT 778

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             KT+             V+  L   +  F+P +A  I+  L    E 
Sbjct: 779 QDKTDDK--FNAYNTLYTVLYHLVRAIAPFLPFVAESIWLGLGFQREK 824



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 71/222 (31%), Gaps = 20/222 (9%)

Query: 2   KEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +E+ ++      + N  PH GH     I D +AR+  + G  V    G D HG     
Sbjct: 37  RSKERSFVFYDGPPFANGLPHYGHLLTGFIKDAVARYKTMRGFRVERRFGWDCHGLPAEM 96

Query: 61  AAQNA-------------GVTTKVFVDQNSRNFRDMADVLD------ISYDDFIRTTEKR 101
            A+                     +   +   F              + +++  RT +K 
Sbjct: 97  LAEKELGVSGRASIENLGIGKFNDYCRGSIMRFAQQWKEYVERQARWVDFENGYRTMDKS 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             ++    + ++  KG +Y+      YS   +   ++ E       +   ++   V++  
Sbjct: 157 FMESVMWAFHELWRKGLVYESVRVVPYSWACQTPLSNFETKMDNAYREKVSKSVTVKFAL 216

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
            E   F     +   +  + + P  ++         +    G
Sbjct: 217 SERVGFAPQGVESCSMLAWTTTPWTLVSNFALAINTNMDYVG 258


>gi|312601590|gb|ADQ90845.1| Leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 790

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 4/206 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             R+K YI     YP+A   H+GH      +D++ARF RL+G DVL   G D  G    +
Sbjct: 26  TSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  +N  NF+        SY  D  I T++   +   + ++K +     
Sbjct: 86  YAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+ +  +G   + + N PV   + + +  +++ Y  KLL
Sbjct: 146 AEIREVEVNWCPELGTVLANEELKREKNGALVSERGNFPVILKKMKQWVLKITEYAQKLL 205

Query: 178 SYYESHPEFILPIERRNEVISFVKSG 203
              +           + + I   K  
Sbjct: 206 DGLDQVDFPDSLKTLQKKWIGKSKGW 231



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 128/373 (34%), Gaps = 54/373 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + E+   +      +           +   P+    + + F K+
Sbjct: 402 WVFSRQRYWGEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKDWVFFEKN 461

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G      +     W         +I+      L                  K+ P DL++
Sbjct: 462 GKYYRRETNTMPQWSGSSWYYLAFILKEKDKYL------PLDSKIAYDKFKKWLPVDLYI 515

Query: 263 IGKDIL--------RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++           +H + + A ++  + P  K +     +   G+K+SKS GN I+P 
Sbjct: 516 GGQEHAVGHLIYSRFWHRVLFDAGIVPNSEPFQKIIHQGMLLGSDGQKMSKSKGNTINPT 575

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I++ G D +R FL+     G    +D++G+           I N + R    IL DY+
Sbjct: 576 EMIDKFGADTIRIFLMFMGPIGDLRLWDENGVVS---------IFNWIQRVQRTILADYE 626

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                     E D       +  + EI   ++    + A+++++  ++ +++        
Sbjct: 627 I-----DPELEKDYEFTYFFNNFVFEITNLIETFKFNVAISKLMVYINFLNK-------- 673

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                       +       +    I+   F P  A ++ + L         + L+ ++ 
Sbjct: 674 ---------KQKIPS--KNYLTDFLIIFSVFAPHTAEELLEKLGQ-------KPLNFQIW 715

Query: 495 PGFMLHKTFDPIF 507
           P F   K F   F
Sbjct: 716 PQFDRSKIFKNTF 728


>gi|290512629|ref|ZP_06551995.1| isoleucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289774970|gb|EFD82972.1| isoleucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 938

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 500

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 669 FDPAKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQN------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            +          T   F  +      +  D       DFIR
Sbjct: 106 VEQQYGKPGEKFTAAEFRAKCREYAAEQIDG---QRKDFIR 143


>gi|229821049|ref|YP_002882575.1| isoleucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566962|gb|ACQ80813.1| isoleucyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 1098

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 75/421 (17%), Positives = 139/421 (33%), Gaps = 79/421 (18%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
                     +     NP+ +   E +F R+SA++D+++    +     +P   ++    
Sbjct: 425 RHETYDHSYPHCWRCKNPLIYKGVESWFIRVSAFRDRMVEL--NQEITWVPEHLKDGQFG 482

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----DDPQY---------------------------- 226
               G +D S+SRK   WG  IP    DDP++                            
Sbjct: 483 KWLEGARDWSISRKR-YWGTPIPVWTSDDPEHPRIDVYGSIAQLEADFGVPVEDLHRPFI 541

Query: 227 ----------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV-- 262
                                 +M VW D+ +       Y           +P D  V  
Sbjct: 542 DRLTRPNPDDPTGRSTMRRIPDVMDVWFDSGSMPFAQVHYPFENTEWFEHHFPGDFIVEY 601

Query: 263 IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
           IG+    F+ ++  +  L         V     +   G K SKSL N  DP+ + +  G 
Sbjct: 602 IGQTRGWFYLLHVLSTALFDRPAFRTCVSHGIILGDDGRKASKSLRNFPDPMRMFDAYGS 661

Query: 323 DALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD----YDGMI 377
           DA+R+ L+        +    ++ ++  V   L          S+     D     D   
Sbjct: 662 DAVRWSLMSSPVLRGGNLVVAEEAIRTEVRGVLLPLWNTWYFFSLYANTVDDGAGIDVRP 721

Query: 378 PTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQ 431
           P+P       + D  +L+    +++ + + ++   I RA   V   +  V + Y     Q
Sbjct: 722 PSPSEVAGLADMDRYVLARTRSLVERVTDALEVYDIARACTAVRDHLDVVTNWYVRTSRQ 781

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSL 489
           + W       D  +        V+  L  L+    P +A +++  L    +     + +L
Sbjct: 782 RFW-------DEDAGAYGTLYTVLEVLTRLMAPLAPMVAEEVWRGLTGGRSVHLTDWPAL 834

Query: 490 D 490
           D
Sbjct: 835 D 835



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 23/163 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK--------------- 57
             + N  PH GH     + DV+ R+  + G  V    G D HG                 
Sbjct: 68  PPFANGLPHYGHLLTGYVKDVVPRYRTMRGKHVERRFGWDTHGLPAELEAERLLGITDKS 127

Query: 58  ------IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                 I    +    +   +  +        A  +D   D   +T +  + ++    +K
Sbjct: 128 QIEELGIEAFNKECRESVLRYTREWEEYVTRQARWVDFENDY--KTLDPTYMESVIWAFK 185

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
           ++ DKG  Y+G     Y  RD+   ++ E+    D        
Sbjct: 186 ELYDKGLAYEGYRVLPYCWRDQTPLSNHELRMDDDVYRMRQDP 228


>gi|193794510|gb|ACF21467.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P      D  +L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PEPAELEAIDRVLLDAVEAGFASVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVADL 166


>gi|121712160|ref|XP_001273695.1| valyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119401847|gb|EAW12269.1| valyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 1057

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 72/416 (17%), Positives = 133/416 (31%), Gaps = 96/416 (23%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + ++ + +  ++ R+S      L         I P   R+    +++  + D  L
Sbjct: 458 CSKSKDVIEPLMKPQWWMRMSELAKDALKVVRDGDVTIQPESARDNYFRWLE-NITDWCL 516

Query: 210 SRKTFDWGIKIP--------------------------------------------DDPQ 225
           SR+   WG +IP                                             DP 
Sbjct: 517 SRQ-LWWGHQIPAYFVDIEGQPTDETNDQRWVAGRTEEEARQKAEARFPNQRFTLRRDPD 575

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
            ++  W  A     +T G+           +P  L   G DIL F    +   +  L+  
Sbjct: 576 -VLDTWFSAGLWPFSTLGWPRQTH-DLENLFPTSLLETGWDILFFWVARMIMLSLKLTGK 633

Query: 284 LPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------------- 317
           +P  K+V+ H  I   +G K+SKSLGNVIDP++V+                         
Sbjct: 634 VPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPVDVMEGISLQKLHDKLHQGNLDPRELGVA 692

Query: 318 ------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
                        E G DALR+ L++    G D  +D             N +       
Sbjct: 693 MKYQKAAFPNGIPECGADALRFSLIQYTTGGGDISFDVK--VMAGYRRFCNKVYQAAKFV 750

Query: 366 VSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
           +  I   Y     +   G  +  +  +L   +   Q I   +  +   RA   V      
Sbjct: 751 LGKIGDQYTPPSTLDKTGDESLGERWMLHKLNTASQNIDRALSEKEFSRAAQIVYQYWYD 810

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  D + +  K    + +  +   + L      +     ++  F+P ++ +++  L
Sbjct: 811 NLCDVFIEHSKFLIQQGSERE-VRSALNTLYNALEAGLRMIHPFMPFISEELWQRL 865



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 19/159 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I           H GHA    + D L R+HR+ G   L+  G D         
Sbjct: 129 KPKGTYVIPIPPPNVTGALHCGHALGTALQDCLIRWHRMKGYTTLYLPGCDHASISTQSV 188

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +N     +                  + ++       +   L  S+D      T +   
Sbjct: 189 IENMLWRRERKTRHDLGREQFTSRALEWKEEYHSKINTVLKRLGGSFDWTREAFTMDDNL 248

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                  + ++ ++G IY+      + +      ++ EV
Sbjct: 249 SAAVTECFVRLHEEGYIYRSSRLVNWCVHFNTAISNLEV 287


>gi|85712277|ref|ZP_01043328.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693904|gb|EAQ31851.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 944

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 131/409 (32%), Gaps = 43/409 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFR 168
               + YK  Y   +  +    +       +     G       Q   V+W+ E G    
Sbjct: 401 LMHAERYKHSYPHCWRHKTPIIFRATPQWFISMDQKGLRSQALEQIKQVRWVPEWGQSRI 460

Query: 169 LSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
            S  + +          +  P    + R  E +      L +  +++     G++   D 
Sbjct: 461 ESMVEGRPDWCISRQRTWGNPIAIFVNRETEELHPNTLELME-QVAQLIEKDGVQAWFDL 519

Query: 225 Q----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                              + VW D+   +                 WPADL++ G D  
Sbjct: 520 DPATLLGDEADKYRKVTDTLDVWFDSGVTHHCVLREFP------GLSWPADLYLEGSDQH 573

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F +       +    P  + +     +  +G K+SKS+GNV+ P +V+ ++G D LR
Sbjct: 574 RGWFQSSLVTGVAMYEQAPYRQVLTHGFTVDAQGRKMSKSIGNVVAPQDVMNKLGGDILR 633

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
            ++      G+    D+     + +AD    I N  SR +   L  YD            
Sbjct: 634 LWVASADYSGEMTVSDE---ILKRSADAYRRIRNT-SRFLLANLSGYDPKQHQVPMDEMV 689

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNP 441
           E D  I+   + + +++ +   N      + +++   S      Y D  K  +   K + 
Sbjct: 690 ELDRWIVGRAADLQKQLVDAYDNYQFLSVVQKLMHFCSIELGSFYLDIIKDRQYTAKADS 749

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
               +       +   L   +       A +I+D+L    E   F    
Sbjct: 750 LARRSCQTALHHIAEALVRWMAPICSFTAQEIWDLLPGEREQYVFTQAW 798



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 80/263 (30%), Gaps = 22/263 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N Q HIGHA   I+ D++ +   L   D  +T G D HG  I   
Sbjct: 46  QGKPSFILHDGPPYANGQIHIGHAVNKILKDIIIKSKTLSDFDAPYTPGWDCHGLPIELQ 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        R+    L +   +D+   T   +     
Sbjct: 106 VEKKHGKPGQKLDLAEFRKHCRDYAQTQIDQQREDFKRLGVLGDWDNPYLTMNFKQEADS 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI DKG +++G     +     +   + EV              P+   ++    
Sbjct: 166 VRALAKIIDKGHLHQGFKPVHWCTDCGSALAEAEVEYKDKESPAIDVRMPLTDSDKALAA 225

Query: 167 FRLS---AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           F        Q KL     +   + +P  R   +   ++  L  +  +       + +  D
Sbjct: 226 FTTPEGHQGQGKLSMVIWTTTPWTMPANRAVTLAEGLEYALVQIEATDDQQAERVILASD 285

Query: 224 P-QYIMYVWIDALTNYLTTTGYL 245
                M  W     N+    G+ 
Sbjct: 286 LVNDCMDRW---GINHYHKLGFC 305


>gi|288937224|ref|YP_003441283.1| isoleucyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288891933|gb|ADC60251.1| isoleucyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 938

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 500

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 669 FDPAKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQN------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            +          T   F  +      +  D       DFIR
Sbjct: 106 VEQQYGKPGEKFTAAEFRAKCREYAAEQIDG---QRKDFIR 143


>gi|169350330|ref|ZP_02867268.1| hypothetical protein CLOSPI_01091 [Clostridium spiroforme DSM 1552]
 gi|169293113|gb|EDS75246.1| hypothetical protein CLOSPI_01091 [Clostridium spiroforme DSM 1552]
          Length = 798

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H+GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKYYCVDMFPYPSGNGLHVGHPEGYTATDIVSRMKRMQGYNVLHPMGFDSFGLPAEQF 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N   F+     L  SY  D  I T++  ++   + ++ K+ D G  
Sbjct: 90  AIQTGHHPAEFTKKNIEVFKGQIKSLGFSYDWDREIATSDPEYYKWTQWIFTKLYDAGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +A   ++EV  G           PV       +  +++ Y ++LL  
Sbjct: 150 YVDEIPVNWCPELKAVLANEEVIDGKS----ERGGYPVIRKPMRQWVLKITEYAERLLKD 205

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 206 LDDLDWPEATKQMQRNWI 223



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/439 (12%), Positives = 129/439 (29%), Gaps = 62/439 (14%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  D+  + ++    +            +
Sbjct: 331 YGTGAIMAVPAHDQRDWEFAKKFDIEIIPVLEGGDVEKEAYV----EDGVHINSSWLDGL 386

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME---EEGYFFRLS 170
             +  I K           +   +          Q Y  +  P+  ME            
Sbjct: 387 GKQEAIDKMVAWLEEHKCGQKKVSYKLRDWLFSRQRYWGEPIPIIHMEDGTMRTVPLEEL 446

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +      ++ H     P+    + +     G K    +     W        +YI   
Sbjct: 447 PLELPATKNFQPHESGESPLANCEDWLEVEIDGKKGRRETNTMPQWAGSCWYYIRYI--- 503

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSA 282
                                  K+ P DL++ G +    H +Y   +         +  
Sbjct: 504 --------DPHNSEAICDPKLLEKWLPVDLYIGGAEHAVLHLLYSRFWHKVLYDAGIVKC 555

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  +       +    EK+SKS GNV++P +++   G DALR + +          + 
Sbjct: 556 KEPWQRLFHQGMILGDNNEKMSKSRGNVVNPDDIVASHGADALRLYEMFMGPLEAALPWS 615

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +GL         +G    + R   + ++             E+D S+  V  + ++++ 
Sbjct: 616 TNGL---------DGARKWLDRVYRLFIE-------QDKLSDENDHSLDRVYHQTVKKVT 659

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ ++   + A++Q++  ++E  +                       V  E       +L
Sbjct: 660 DDFESLGFNTAISQMMIFINECYK--------------------APTVYKEYAFNFIKML 699

Query: 463 QAFVPKLANKIFDILFVAD 481
               P +  +++ +L   +
Sbjct: 700 SCIAPHVCEEMWQLLGHDN 718


>gi|315148307|gb|EFT92323.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 820

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 45  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 105 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 164

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 165 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 220

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 221 LELVDWPESIKDMQRNWIGRSE 242



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 145/442 (32%), Gaps = 64/442 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 357 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 416

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 417 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 476

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 477 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 536

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 537 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGMVPTKEPFQKLYNQGMILGENNEKMSKS 596

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 597 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGS---------RKFLDRVW 647

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  V  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 648 RLIVDEEGKMRDRIT--TINDGRLTKVYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 705

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                               V  +  E +     LL    P +  +++ IL   +E+  +
Sbjct: 706 --------------------VDALPYEYVEGFVQLLAPIAPHIGEELWQILG-NEESLTY 744

Query: 487 QSLDQRLKPGFMLHKTFDPIFP 508
                  +   ++    + +F 
Sbjct: 745 VPWPTYDEAA-LVEDEVEVVFQ 765


>gi|298385595|ref|ZP_06995153.1| isoleucine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261736|gb|EFI04602.1| isoleucine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 1162

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 106/298 (35%), Gaps = 13/298 (4%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P E   E    +      +       + G  +  +   ++ VW D+         Y  
Sbjct: 592 FVPGEYTEENYDKIDLHRPYVDDVILVSEDGQPMKRESD-LIDVWFDSGAMPYAQIHYPF 650

Query: 247 NPDG--SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                    + +PAD    G D     F  ++  A ++  ++     + +   +   G K
Sbjct: 651 ENKDILDNREVYPADFIAEGVDQTRGWFFTLHAIATMVFDSVSYKAVISNGLVLDKNGNK 710

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SK L N +DP   IE+ G D LR++++   +   +  +D +G+++              
Sbjct: 711 MSKRLNNAVDPFTTIEKYGSDPLRWYMITNSSPWDNLKFDVEGIEEVRRKFFGTLYNTYS 770

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++   +  ++            E D  ILSV + +++E+          +A   +   
Sbjct: 771 FFALYANVDGFEYKEADVPMAERPEIDRWILSVLNTLIKEVDTCYNEYEPTKAGRLISDF 830

Query: 421 VSE--VDRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           V++   + Y   + ++ W           +        +  +A L+    P  A++++
Sbjct: 831 VNDNLSNWYVRLNRKRFW--GGEFTQDKLSAYQTLYTCLETVAKLMAPISPFYADRLY 886



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M ER               N  P I H     I D+  R+  + G  V    G D HG  
Sbjct: 34  MTERDGCPSFVFFEGPPSANGMPGIHHVMARTIKDIFCRYKTMKGYQVKRKAGWDTHGLP 93

Query: 58  IAKAAQNAGVTTKVFV-----------------DQNSRNFRDMADVLD--ISYDDFIRTT 98
           +  + + A   TK  +                  + ++ + D+   +   +       T 
Sbjct: 94  VELSVEKALGITKEDIGKKISVADYNAACRKDVMKYTKEWEDLTHQMGYWVDMKHPYITY 153

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + R+ +T   L K++  KG +YKG     YS       +  E+ +             V 
Sbjct: 154 DNRYIETLWWLLKQLHKKGLLYKGYTIQPYSPAAGTGLSSHELNQ-PGCYRDVKDTTAVA 212

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPE 185
             + +     ++ +       + + P 
Sbjct: 213 QFKMKNPKPEMAEWGTPYFIAWTTTPW 239


>gi|308189924|ref|YP_003922855.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777133|ref|YP_004136784.1| leucyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624666|gb|ADN68971.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038208|gb|ADV34407.1| Leucyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 780

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           YI +   YP+   H+GH     I DVLAR++R  G +VL   G D  G     AA   G+
Sbjct: 35  YILSMFPYPSGNIHMGHVRNYAIGDVLARYYRRKGFNVLHPFGWDAFGLPAENAAIKNGI 94

Query: 68  TTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS 125
             K +  +N +N       L IS+  +    T ++ +    ++++ K+  KG +Y+    
Sbjct: 95  HPKDWTYKNIKNMNPKLKDLGISFAWNYECITADEIYTKWEQLIFIKMWKKGLVYRKKAL 154

Query: 126 GWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE-SHP 184
             +   D+    +++V  G          N V   E E Y+ ++  Y ++L +  E    
Sbjct: 155 LNWCENDQTVLANEQVEDGK----CWRCGNIVVQKEMEQYYLKIRNYAEELQNDLELLKN 210

Query: 185 EFILPIERRNEVISFVKSG 203
            +   +    +     ++G
Sbjct: 211 HWPDKVLMMQKNWIGYETG 229



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 121/360 (33%), Gaps = 36/360 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+    + G            L Y  +      P++  N+ +   K 
Sbjct: 384 WGISRQRYWGAPIPMINCAKCGLVPEKEENLPVTLPYKVNFTTSGNPLKTNNKWLE-TKC 442

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                  +R+T  +      D  +    +    T                  +   D ++
Sbjct: 443 PKCHSKATRETDTF------DTFFESSWYFLRYTTPPAKRESHIFDKVQLKYWNNVDEYI 496

Query: 263 IGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   F        ++    P    + + G IL  G K+SKS GNV+ P 
Sbjct: 497 GGVEHAILHLLYARFFTKVLADLKMVDFREPF-DNLLTQGMILKDGLKMSKSKGNVVSPD 555

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I++   D +R F++      K+  +   G++          I  L++RS  +  KD  
Sbjct: 556 EMIKKYDADTMRLFVLFAAPPEKELEWISSGIEGCH-----KFIKRLIARSKEVKAKDKL 610

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             I       E   +   +   ++++      ++  + A   +I+   E    +D     
Sbjct: 611 ADIKNLKLNNEEKNARRKLYQGLIKQ-ENLFSDRRNNYAFNTIIAWAMETFNAYDKITNS 669

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            L K              E+   L  +L+ F+P LA ++ +  F     + F   +  L+
Sbjct: 670 LLIK--------------EMYYVLLNILEPFIPHLAWELSEQFFKLKNLKDFSVDNSALE 715


>gi|31873336|emb|CAD97659.1| hypothetical protein [Homo sapiens]
          Length = 1242

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/460 (14%), Positives = 138/460 (30%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 349 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N    L+   + +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 798



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|13357972|ref|NP_078246.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762094|ref|YP_001752494.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920368|ref|ZP_02931698.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508502|ref|ZP_02958030.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701674|ref|ZP_02971372.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549554|sp|Q9PQ79|SYI_UREPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|11271209|pir||G82894 isoleucyl-tRNA synthetase UU410 [imported] - Ureaplasma urealyticum
 gi|6899398|gb|AAF30821.1|AE002138_8 isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827671|gb|ACA32933.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902796|gb|EDT49085.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675931|gb|EDT87836.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700922|gb|EDU19204.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 900

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 17/290 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     + IM VW D+ ++Y     Y           +PAD+++ G D     F++    
Sbjct: 516 KTFYKEKDIMDVWFDSGSSYNILGHYN--------LNYPADVYLEGYDQYRGWFNSSLIT 567

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             +L+   P    V     +  +G K+SKS GNV+DP++V +  G D LR ++       
Sbjct: 568 GTILNNRAPYKYLVAHGMVLDGEGYKMSKSKGNVVDPLDVCKIYGADVLRLWIANSDYQ- 626

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D    ++ LK+  NA++   I N + +    IL D++  +       + ++ +L+  + 
Sbjct: 627 NDTRISEEILKQ--NAEIYRRIRNTLFKYSLSILNDFEPSVDFSFNVRQEEQFVLNEFNE 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVE 453
           +  ++ +  +N      +      +      YF+  K   + L   +P R   +      
Sbjct: 685 LHIKVIKAYENFDYQTVVKLFNKFILDLSSWYFENIKDDMYCLAINDPIRKQ-IQSAVYW 743

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
           +++   I L   +P    + +  L  A++    +  D   +  F   K  
Sbjct: 744 ILKNSLIDLTPIIPHTTEEAYSFLKDANKKESIRLEDFYDQSQFQFKKGI 793



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 13/155 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+++   +     Y N   HIGHA   I+ D +  +H ++     +  G D HG  I  A
Sbjct: 46  KDKKPFILHDGPPYANGNIHIGHALNKILKDFVVSYHNMNNYYSPYIPGWDTHGLPIEVA 105

Query: 62  -----------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRI 108
                              K +  +   N       L +  D   R  T +  +      
Sbjct: 106 LSKKIKLSNLSVNERREQCKKYALEQVNNQIQQFLRLGMISDFKQRYLTLDHNYEIDQLK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           L+  +  KG IY+     ++S   +    + E+  
Sbjct: 166 LFTYMLKKGFIYQDFKPVFWSWSSQTALAESEIEY 200


>gi|229823227|ref|ZP_04449296.1| hypothetical protein GCWU000282_00525 [Catonella morbi ATCC 51271]
 gi|229787393|gb|EEP23507.1| hypothetical protein GCWU000282_00525 [Catonella morbi ATCC 51271]
          Length = 808

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 79/206 (38%), Gaps = 7/206 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K Y      YP+ Q  H+GH       D +AR  R  G DVL   G D  G    + A 
Sbjct: 37  PKFYALDMFPYPSGQGLHVGHPEGYTATDAVARMKRAQGYDVLHPMGWDAFGLPAEQYAL 96

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + G     F   N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  Y+
Sbjct: 97  DTGNDPADFTAANIETFRRQINSLGFSYDWEREVNTTDPNYYKWTQWIFSKMYEKGLAYE 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +         ++EV  G          +PV     + +  +++AY ++LL   +
Sbjct: 157 AEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVYRKPMKQWMLKITAYAERLLEDLD 212

Query: 182 SHPEFILPIERRNEVISFVKSGLKDL 207
                    E +   I   +  L + 
Sbjct: 213 LLDWPESLKEMQRNWIGKSEGALINF 238



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 102/285 (35%), Gaps = 45/285 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++   +     AK+ P DL++ G +    H +Y   + 
Sbjct: 490 ETNTMPQWAGSSWYYLRYIDPQNSERLADPDKLAKWLPVDLYIGGAEHAVLHLLYARFWH 549

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +    P  K       +   G K+SKS GNV++P  V+++ G D LR + + 
Sbjct: 550 KFLYDLGVVPTKEPFMKLFNQGMILGTDGNKMSKSKGNVVNPDHVVDQYGADTLRVYEMF 609

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                    + ++GL+              + R   + +   +    +       + ++ 
Sbjct: 610 MGPLDASIAWSENGLEST---------RRFLERIWRLYVA--EDGSLSERIQDAENPALE 658

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            V  + ++++ E+ +    + A++Q++  ++                    +  T++   
Sbjct: 659 RVYHQTVKKVTEDYEILHFNTAISQMMIFLNAT------------------KDQTIIPKA 700

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQRLK 494
               + L  LL    P +  +I+  L   D   +  + S ++ L 
Sbjct: 701 Y--AQGLIQLLAPLAPHICEEIWQKLGHQDSISHVAWPSYEEALT 743


>gi|323355040|gb|EGA86871.1| Vas1p [Saccharomyces cerevisiae VL3]
          Length = 1011

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 138/439 (31%), Gaps = 64/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R     ++  K +    +  +          D        + + +  E+ K A     
Sbjct: 435 DARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVR 494

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           + Q        E  YF  L   QD  +S                E     +         
Sbjct: 495 DGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRIDGDYWVAG 554

Query: 211 RKT-----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           R              +    +  D   ++  W  +     +T G+ +        F+P  
Sbjct: 555 RSMEEAEKKAAAKYPNSKFTLEQDED-VLDTWFSSGLWPFSTLGWPEKTK-DMETFYPFS 612

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +      L+ ++P  K+VF H  +   +G K+SKSLGNVIDP++V
Sbjct: 613 MLETGWDILFFWVTRMILLGLKLTGSVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDV 671

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +D L   L++     ++                                      
Sbjct: 672 ITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRDI 731

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
           + D L+        N I      ++  +  DY         G  +  ++ IL   +   +
Sbjct: 732 NLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGLSGNESLVEKWILHKLTETSK 791

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + E +  +    + + +        D Y +  K + +++ +     +       ++   
Sbjct: 792 IVNEALDKRDFLTSTSSIYEFWYLICDVYIENSK-YLIQEGSAIEKKSAKDTLYILLDNA 850

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P ++ +++  L
Sbjct: 851 LKLIHPFMPFISEEMWQRL 869



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 19/144 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 137 FCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQI 196

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++     ++    L  SYD      T       +  
Sbjct: 197 WAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDWSREAFTLSPELTKSVE 256

Query: 108 ILWKKISDKGDIYKGCYSGWYSLR 131
             + ++ D+G IY+      +S++
Sbjct: 257 EAFVRLHDEGVIYRASRLVNWSVK 280


>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 946

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 70/296 (23%), Positives = 110/296 (37%), Gaps = 20/296 (6%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           +    L D          G       + I+ VW D+  +Y             +    PA
Sbjct: 517 WFARPLTDFIGPEARCTCGSTNLTKEEDILDVWFDSGVSYAAVLE------QRRELQSPA 570

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL++ G D     F +    A       P    +     +  KG+K+SKS+GNVI P ++
Sbjct: 571 DLYLEGSDQHRGWFQSALLAAVGTRGTAPYKAVLTHGFVVDGKGKKMSKSIGNVIAPGQI 630

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G + LR +   E     D     + LK+   AD    I N V R +   L D+D  
Sbjct: 631 IEKHGAEILRLWAASEDY-RDDIRISDNILKQL--ADAYRKIRNTV-RFLLGNLHDFDPT 686

Query: 377 ---IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQ 431
               P      E D  IL+   ++ ++ R    +   H+    + +   VS    Y D  
Sbjct: 687 APGAPPEAEMDELDRWILARFEQLKEKTRTGYDSFEFHQVYHGLYNFCTVSLSALYLDIV 746

Query: 432 KP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           K   + +   +P R      V  E+   L  LL   +  LA + ++ L V  E   
Sbjct: 747 KDRLYTMPADHPQR-RAAQAVMYEICDGLLRLLAPILSFLAAEAWEYLPVDQEREA 801



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 52/202 (25%), Gaps = 16/202 (7%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             LY+      Y N   H+GHA   I+ D++ +  R+ G    +  G D HG  I     
Sbjct: 47  RPLYVLHDGPPYANGHLHMGHALNKILKDIILKSKRMSGYHCPYVPGWDCHGLPIELNVD 106

Query: 64  NAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                 K              + DQ      +    L +   +     T + R+      
Sbjct: 107 KELGEQKAAIGKLEFREKCRRYADQWIAVQSEEFQRLGVLGHWQQPYLTIDYRYEAAIAR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            +      G + +      +         + EV              P+Q    +    +
Sbjct: 167 EFNNFLLNGLVSRSRKPVHWCASCRTALAEAEVEYADQTSPSIYVKFPLQPAAAKALAEK 226

Query: 169 LSAYQDKLLSYYESHPEFILPI 190
                  L            P 
Sbjct: 227 HPNLSPDLFPNLFLVIWTTTPW 248


>gi|302518519|ref|ZP_07270861.1| isoleucyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427414|gb|EFK99229.1| isoleucyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 1048

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/402 (14%), Positives = 132/402 (32%), Gaps = 15/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +        G++ +   N V W  
Sbjct: 396 PHCWRCHTALLYYAQPSWYIRTTAVRDRLLEENEKTNWHPENVKHGRFGDWLKNNVDWAL 455

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    ++H   +  +   +E+    +SGL           +     
Sbjct: 456 SRKRYWGTP---LPVWRCPDNHLTCVGSLAELSELTGTDQSGLDPHRPYIDAVTFACPEC 512

Query: 222 DDP----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                  + ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 513 GAGATRVEEVIDAWYDSGSMPFAQWGYPYRNKELFEARYPAQFISEAIDQTRGWFYTLMA 572

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 573 IGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 632

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSV 393
                     +++ V   L      +  +++     ++      P        D  +LS 
Sbjct: 633 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSNWAPSAADPAPAERPVIDRWLLSE 692

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++   + E +++   HR    + + V ++  ++  +      + +     T      E
Sbjct: 693 LHKLTAGVTEALESYDTHRTGQLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 748

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+   VP +  +++  L V+ +    +S+     P
Sbjct: 749 VVETVTRLMAPLVPFVTERVWQDLVVSVDASAPESVHMASWP 790



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  R+  + G  V    G D HG  +  A
Sbjct: 41  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRYRTMRGYHVGRKAGWDCHGLPVELA 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 101 VEKELGFTGKKDIEAYGIAEFNAKCRESVTRHTDAFTELTTRMGYWLDIDDAYRTMDPEY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG + +      +  +DE   +D E+ +G +
Sbjct: 161 VESVWWSLKQIFDKGLLVEDYRVAPWCPKDETGLSDHELAQGYE 204


>gi|270016168|gb|EFA12616.1| hypothetical protein TcasGA2_TC006857 [Tribolium castaneum]
          Length = 1047

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 77/551 (13%), Positives = 159/551 (28%), Gaps = 123/551 (22%)

Query: 36  RFHRLDGLDVLFTTGTD------------EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           R+  L G  V+                  + G    K              ++S  F  +
Sbjct: 338 RYKHLHGKRVIHPFCDRKLPIVLDEFVERDFGTGAVKITPAHDPNDYEVGKRHSLPFITI 397

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            D       D+ + T  +  +  + + +++ + G   +   +                  
Sbjct: 398 FDDKGYICGDYGKFTGMKRFEARKAVTEELKELGLYVETKNNPMVVP------------- 444

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                  +   + ++ M +  ++ +      K +    S    I+P     +   +  +G
Sbjct: 445 -----VCSRSKDIIEPMLKPQWYVKCDEMAAKAVEAVNSGELKIIPEMHI-KTWHYWMNG 498

Query: 204 LKDLSLSRKTFDWGIKIP------------------------------------------ 221
           ++D  +SR+   WG +IP                                          
Sbjct: 499 IRDWCISRQ-LWWGHRIPAYYATLKSKGGKPGSDADDNSHWISGRSESEARQKAAKLYNT 557

Query: 222 -------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
                     + ++  W  +     +  G+ +  +  +  F+P  L   G DIL F    
Sbjct: 558 TPDDIILTQDEDVLDTWFSSGLFPFSIFGWPEETEDLRI-FYPTSLLETGHDILFFWVAR 616

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +    L   LP  +           G K+SKSLGNVIDP++VI+ + ++ L   L   
Sbjct: 617 MVFFGQKLLGKLPFKQVYLHPIVRDAHGRKMSKSLGNVIDPMDVIKGIALEDLHQQLYES 676

Query: 333 ----------------------------------IACGKDGFYDKDGLKKRVNADLANGI 358
                                              A       + D L+ +      N I
Sbjct: 677 NLDPSEVEKAKAGQKRDYPEGIPECGTDALRFALCAMCSGRDINLDILRVQGYRFFCNKI 736

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            N    +++    ++   +       E   D  +LS  +  +++      +     A   
Sbjct: 737 WNATKFALTYFSDEFQAPVDGGFVGNEKVMDLWMLSRLAAAVRDANHGFSHYEFPTATTA 796

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + ++      D Y +  KP      +     T        +     LL  F+P +  +++
Sbjct: 797 IYNVWLYELCDVYLEYLKP-IFASGDEATKKTAQVTLYRALEVGLRLLSPFMPFITEELY 855

Query: 475 DILFVADENRC 485
             L    E R 
Sbjct: 856 QRLPRPKEIRD 866



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 21/158 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K  I           H+GHA    I D + R+HR+ G   L+  G D  G       +
Sbjct: 119 RGKFVIVIPPPNVTGSLHLGHALTNAIQDSIVRWHRMRGETTLWNPGCDHAGIATQVVVE 178

Query: 64  NAGV-----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
                                    + ++           L  S+D + R   T   R  
Sbjct: 179 KKLWRNEKKTRHDIGREGFISKVWEWKEEKGDRIYHQLKKLGSSFD-WDRAQFTMNPRLS 237

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 + ++ ++G IY+      +S   ++  +D EV
Sbjct: 238 RAVTEAFVRLHEEGYIYRANRLVNWSCTLKSAISDIEV 275


>gi|301065901|ref|YP_003787924.1| leucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438308|gb|ADK18074.1| Leucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 803

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY +KLL+ 
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVVRKPMRQWMLKITAYAEKLLTD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 205 LDDLDWPESIKQMQRNWI 222



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 132/412 (32%), Gaps = 63/412 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + R +   +      K + + G++ +  Y+G     +  + +    +   D      + 
Sbjct: 341 HDDRDYAFAKKFGIEIKPVIEGGNVDEAAYTGDGVHINSGFLDGLNEHDAIDRMIKWLED 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
             +       +   + F    Y  + +                     LP E   +    
Sbjct: 401 KGIGSAKINYKLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLTLPEEADIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF 255
            +S L +L+      D   +        M  W    + Y        N     D  K K 
Sbjct: 461 GESPLANLTDWVNVVDKNGRKGKRETNTMPQWA-GSSWYFLRFVDPHNKEALADYDKLKA 519

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P DL++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 520 WMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGAIPNKEPFQRLFNQGMILGDNHEKMSKS 579

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D LR + +          +   GL          G    + R  
Sbjct: 580 KGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGL---------AGARKFLDRVW 630

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S  + D   +       T +D  +  V +  ++++ E+      + A++Q++  ++    
Sbjct: 631 SAFIDDEGKLRDRIT--TINDGRLDKVYNETVKKVTEDYDALHFNTAISQMMVFINSA-- 686

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +K +         + +E +     +L    P L  +I+  L 
Sbjct: 687 ----------RKDDD--------LPLEYVEGFVKMLAPIAPHLMEEIWSRLG 720


>gi|239631095|ref|ZP_04674126.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525560|gb|EEQ64561.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 803

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY +KLL+ 
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVVRKPMRQWMLKITAYAEKLLTD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 205 LDDLDWPESIKQMQRNWI 222



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 63/412 (15%), Positives = 132/412 (32%), Gaps = 63/412 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + R +   +      + + + G++ +  Y+G     +  + +    +   D      + 
Sbjct: 341 HDDRDYAFAKKFGIEIRPVIEGGNVDEAAYTGDGVHINSGFLDGLNEHDAIDRMIKWLED 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
             +       +   + F    Y  + +                     LP E   +    
Sbjct: 401 KGIGSAKINYKLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLTLPEEADIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF 255
            +S L +L+      D   +        M  W    + Y        N     D  K K 
Sbjct: 461 GESPLANLTDWVNVVDKNGRKGKRETNTMPQWA-GSSWYFLRFVDPHNKEALADYDKLKA 519

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P DL++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 520 WMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGAIPNKEPFQRLFNQGMILGDNHEKMSKS 579

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D LR + +          +   GL          G    + R  
Sbjct: 580 KGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGL---------AGARKFLDRVW 630

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S  + D   +       T +D  +  V +  ++++ E+      + A++Q++  ++    
Sbjct: 631 SAFIDDEGKLRDRIT--TINDGRLDKVYNETVKKVTEDYDALHFNTAISQMMVFINSA-- 686

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +K +         + +E +     +L    P L  +I+  L 
Sbjct: 687 ----------RKDDD--------LPLEYVEGFVKMLAPIAPHLMEEIWSRLG 720


>gi|167767420|ref|ZP_02439473.1| hypothetical protein CLOSS21_01939 [Clostridium sp. SS2/1]
 gi|167711395|gb|EDS21974.1| hypothetical protein CLOSS21_01939 [Clostridium sp. SS2/1]
          Length = 803

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKLLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +N +   + +     +D  + TT+   +   + ++ K+  KG  
Sbjct: 89  AIKMGTHPRISTEANIKNIKRQINEISAIYDWDMEVNTTDPEFYKWTQWIFVKMFKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGK----CERCGTDVTKKNLRQWMLKITAYADRLLAD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 205 LDKLDWPEKVKKMQAEWI 222



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 49/303 (16%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDN 247
           E      +G   L+      +    +           M  W         Y+      + 
Sbjct: 457 EKYEPTGTGESPLADIEDWVNCKCPVCGKDAKRETNTMPQWAGSSWYFLRYIDNKNNEEL 516

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH 298
               KA  + P D+++ G +    H +Y   +         +  + P  K          
Sbjct: 517 VSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGVIDFDEPFHKLFNQGMITGK 576

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+         +G+
Sbjct: 577 NGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDESGI---------DGV 627

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R   +I+   D  +       E+D+ +L V  +++ +I   + N  ++  ++  +
Sbjct: 628 HRFLTRFYKLIMDQKDKGV-------EADKELLKVRHKLIYDITTRLNNFSLNTVVSGFM 680

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +       A      KK+  D+         E +    +LL  F P +A ++++ + 
Sbjct: 681 EYTNT----LTAMA----KKSGVDK---------ETLETAIVLLAPFAPHIAEELWEAMG 723

Query: 479 VAD 481
             D
Sbjct: 724 HED 726


>gi|193794512|gb|ACF21468.1| methionyl-tRNA synthetase [Actinomyces johnsonii]
 gi|193794524|gb|ACF21474.1| methionyl-tRNA synthetase [Actinomyces johnsonii]
          Length = 168

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + +     DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLARYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P P    + D ++L         +   +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGRI-PEPVELQDIDRALLDAVEAGFASVGGLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   +V+  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQVVTDL 166


>gi|330877644|gb|EGH11793.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 499

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 132/391 (33%), Gaps = 40/391 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV   V  ++NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGVDPVVLANRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFTALREAGAIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+      Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L                    +      L D  ++R   D G+ 
Sbjct: 183 KTAHRAFLKLADFRPQLSDRLLGQAWRKPLDSW----LRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGACRVHTWFMGLAGYMAAFREYADSIGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA   +   + + ++   + F+   G  +S S  + I   ++  +   D+ R +L  
Sbjct: 298 IVYPAQLSVLQGIKVRQRFVPNQFLKLDGLNLSTSRNHAIWVGDLARQACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                 +G +      +    +L NG    +
Sbjct: 358 IAPEDSEGDFRMTQFLE-WREELFNGFFPAL 387


>gi|167630165|ref|YP_001680664.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592905|gb|ABZ84653.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 936

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 135/423 (31%), Gaps = 45/423 (10%)

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ 153
           + TT+        +  + +  +    K  Y   +  +    +   ++ +   DG    A 
Sbjct: 371 MTTTQANPAVIEELKQRGLLIRAGKIKHQYPHCWRCKHPILFRATEQWFASIDGFRKEAL 430

Query: 154 --HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR----------NEVISFVK 201
              + V+W+   G     +   D+          + +PI             N+      
Sbjct: 431 EAIDKVRWIPAWGRDRIYNMVADRGDWCISRQRTWGVPIPIFYCADCGAAIINDETISHI 490

Query: 202 SGLKDLSLSRKTF---------------DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            GL     S   F                 G         IM VW D+ +++        
Sbjct: 491 QGLFREHGSDVWFAREADDLVPPGLTCGHCGHGKFRKEADIMDVWFDSGSSHAAVLETH- 549

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                K   +PADL++ G D     F++    A       P    +     +  +G K+S
Sbjct: 550 -----KDLHFPADLYLEGSDQHRGWFNSSLSTAVATKGTAPYKAVLTHGFLVDEQGRKMS 604

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN ++P +VI+++G D LR ++   +    D     +    R  AD    I N    
Sbjct: 605 KSLGNGVEPQDVIKDMGADILRLWVA-SVDYRTDVAASPN--IMRQTADGYRKIRNTFRY 661

Query: 365 SVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +  +  D+D            E D   + +  +++Q +    +N   H     V +   
Sbjct: 662 FLGNLY-DFDPKADAVAYEDMIELDRWAMMLLHKLIQRVTAACRNYEFHLVYHAVHNFCA 720

Query: 421 VSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V     Y D  K              +   V       L  +L  F+   A +++  L  
Sbjct: 721 VDMSAIYLDIIKDRLYASPAKSQARRSAQTVLYHTADALVRMLAPFISFTAEEVWGYLPG 780

Query: 480 ADE 482
           A E
Sbjct: 781 AKE 783



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 15/170 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-- 60
            + K  +     Y N + H+GH    ++ D + +FH +DG D  +  G D HG  I +  
Sbjct: 52  GKPKFILHDGPPYANGEIHLGHTLNKVLKDFIVKFHSMDGFDAPYVPGWDTHGLPIEQQA 111

Query: 61  -----------AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
                      +        + +  +     R+    L +  D      T +        
Sbjct: 112 IKTLGLNRHAVSTVEFRRRCQEYALKYVDVQREGFKRLGVRGDWENPYITLKPEFEAAQI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++    E    + EV              PV
Sbjct: 172 GVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEYADKESPSIYVKFPV 221


>gi|116494392|ref|YP_806126.1| leucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191637728|ref|YP_001986894.1| leucyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|122264182|sp|Q03AT8|SYL_LACC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693022|sp|B3WCD5|SYL_LACCB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116104542|gb|ABJ69684.1| leucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712030|emb|CAQ66036.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus casei BL23]
 gi|327381793|gb|AEA53269.1| Leucyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327384954|gb|AEA56428.1| Leucyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 803

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   K F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPKTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY +KLL+ 
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVVRKPMRQWMLKITAYAEKLLTD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 205 LDDLDWPESIKQMQRNWI 222



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 132/412 (32%), Gaps = 63/412 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + R +   +      K + + G++ +  Y+G     +  + +    +   D      + 
Sbjct: 341 HDDRDYAFAKKFGIEIKPVIEGGNVDEAAYTGDGVHINSGFLDGLNEHDAIDRMIKWLED 400

Query: 155 NPV----QWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
             +       +   + F    Y  + +                     LP E   +    
Sbjct: 401 KGIGSAKINYKLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLTLPEEADIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF 255
            +S L +L+      D   +        M  W    + Y        N     D  K K 
Sbjct: 461 GESPLANLTDWVNVVDKNGRKGKRETNTMPQWA-GSSWYFLRFVDPHNKEALADYDKLKA 519

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P DL++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 520 WMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGAIPNKEPFQRLFNQGMILGDNHEKMSKS 579

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D LR + +          +   GL          G    + R  
Sbjct: 580 KGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTKGL---------AGARKFLDRVW 630

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S  + D   +       T +D  +  V +  ++++ E+      + A++Q++  ++    
Sbjct: 631 SAFIDDEGKLRDRIT--TINDGRLDKVYNETVKKVTEDYDALHFNTAISQMMVFINSA-- 686

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +K +         + +E +     +L    P L  +I+  L 
Sbjct: 687 ----------RKDDD--------LPLEYVEGFVKMLAPIAPHLMEEIWSRLG 720


>gi|282862150|ref|ZP_06271213.1| isoleucyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282563175|gb|EFB68714.1| isoleucyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 1049

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 135/413 (32%), Gaps = 14/413 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G++ +   N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLQENEKTNWFPDSVKHGRFGDWLTNNVDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         +D  L+   S  E           +   +  +  ++ +    +  
Sbjct: 455 SRNRYWGTPLPIWRCEDGHLTCVGSRAELTELTGTDQSALDPHRPFVDAITFTCSHENCQ 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 LEAYRVPE-VIDAWYDSGSMPFAQWGYPYKNKEIFESRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN +DPI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDESSYENVVCLGHILAEDGRKMSKHLGNTLDPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSV 393
                     +++ V   L      +  +++      +      P     T  D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSAADPAPAERTVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +++++ E ++     RA   + + V ++  ++  +      + +     T      +
Sbjct: 694 LGALVEQVTEALEGYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHD 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           VI  +  L+    P +  +++  L V       +S+     P      + DP+
Sbjct: 750 VIETVTRLIAPLTPFITERVWQDLIVPVTPDAPESVHLSSWPKAD-PASVDPV 801



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMQGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAYGIAEFNEKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+     K+I  K  + +      +  R     +D E+ +G +
Sbjct: 160 VDSVWWSLKEIFKKDLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|31873360|emb|CAD97671.1| hypothetical protein [Homo sapiens]
          Length = 1262

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 66/460 (14%), Positives = 137/460 (29%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       + TT    +  C 
Sbjct: 349 VCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLL-------VATTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPS---RCGKGSLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADLANG---IGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L         L+   + +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYSAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 798



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|85373086|ref|YP_457148.1| valyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84786169|gb|ABC62351.1| valyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 778

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/285 (20%), Positives = 105/285 (36%), Gaps = 13/285 (4%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+  E E             +   +                 +  +G   +++S +    
Sbjct: 413 VKSGEIEIVPKAWEKTFFNWMENIQPWCVSRQLWWGHRIPAWYGDNGECYVAMSEEEAQA 472

Query: 217 ----GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH- 271
               G+ +  D   ++  W  +      T G+ D       K +P DL + G DIL F  
Sbjct: 473 QAGDGVTLTQDSD-VLDTWFSSALWPFATLGWPDETA-LLEKHYPNDLLISGFDILFFWD 530

Query: 272 -AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
             +    +  +   P PK           G K+SKS GNV+DP+ +I++ G DALR+F+ 
Sbjct: 531 ARMMMAGYYNTGLKPWPKLYLHGLVRAADGAKMSKSKGNVVDPLGLIDQYGADALRFFMA 590

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
              + G+D   D+  ++     + A  + N  +R            I  P A   +++ I
Sbjct: 591 AMESQGRDIKMDQSRVEG--YRNFATKLWN-ATRFCQSNGIGASTTIKAPPARLAANQWI 647

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP 433
           +    +V +EI + M +     A   +         D Y +  KP
Sbjct: 648 IGEVQQVCEEIEQAMADLRFDAAANAIYQFTWSRFCDWYLELIKP 692



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I           HIGHA +  + D++ R+ RL G D L+  GTD  G       
Sbjct: 34  DAEPFTIVNPPPNVTGSLHIGHALDNTLQDIVIRYERLRGKDSLWVVGTDHAGIATQMVV 93

Query: 63  QNAGVTTKV--------------FVDQ------NSRNFRDMADVLDISYDDFIRTTEKRH 102
           +      +               +  +       +R  R +   +D S + F  T ++  
Sbjct: 94  ERQLEDKQDKRTNYTRDEFNDIVWKWKAESGGTITRQLRRLGCSMDWSREQF--TMDEHF 151

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++  + + G IY+      +  + +   +D EV +     ++     P+
Sbjct: 152 TKAVLKVFVDLHNDGLIYRDKRLVNWDPKLKTAISDLEVEQQTIPGHFWHFKYPL 206


>gi|260663453|ref|ZP_05864343.1| leucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260551994|gb|EEX25047.1| leucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 805

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN  +FRD    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPADFTNQNVDHFRDQIQSLGFSYDWDREVNTTDPNYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 148 AYEDEIMVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  120 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 125/385 (32%), Gaps = 54/385 (14%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
               ++ K    K               N          Q Y  +  PV   ++      
Sbjct: 383 FLDGLNIKEAKAKMVEWLEEHDCGGKKVNYRLRDWIFSRQRYWGEPIPVIHWDDGTTSLV 442

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                              LP     E     +S L ++      +D   +        M
Sbjct: 443 PED-----------ELPLRLPETDNIEPSGTGESPLANIEDWVNVYDENGRHGKRETNTM 491

Query: 229 YVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
             W         Y   T   +        +W P DL+V G +    H +Y   +      
Sbjct: 492 PQWAGSSWYWLRYTDPTNDKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      
Sbjct: 552 LGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDQYGADTLRLYEMFMGPLE 611

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   +D+ GL         +G    V R   +++ D + +      +   D  +  V ++
Sbjct: 612 ESVPWDEKGL---------HGANKWVQRVWRLLMDDNNHLRDRVSTYN--DGKLTKVYNQ 660

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++++ ++ +    + A++Q++  V+E  +                    V  + VE + 
Sbjct: 661 TVKKVTDDFERMHFNTAISQLMVFVNEAYK--------------------VDVLPVEYME 700

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
               ++   +P LA +++     ++
Sbjct: 701 GFVKMIAPLMPHLAEELWSQFNESE 725


>gi|91094005|ref|XP_971250.1| PREDICTED: similar to Valyl-tRNA synthetase CG4062-PA [Tribolium
           castaneum]
          Length = 1046

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 77/551 (13%), Positives = 159/551 (28%), Gaps = 123/551 (22%)

Query: 36  RFHRLDGLDVLFTTGTD------------EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM 83
           R+  L G  V+                  + G    K              ++S  F  +
Sbjct: 337 RYKHLHGKRVIHPFCDRKLPIVLDEFVERDFGTGAVKITPAHDPNDYEVGKRHSLPFITI 396

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            D       D+ + T  +  +  + + +++ + G   +   +                  
Sbjct: 397 FDDKGYICGDYGKFTGMKRFEARKAVTEELKELGLYVETKNNPMVVP------------- 443

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                  +   + ++ M +  ++ +      K +    S    I+P     +   +  +G
Sbjct: 444 -----VCSRSKDIIEPMLKPQWYVKCDEMAAKAVEAVNSGELKIIPEMHI-KTWHYWMNG 497

Query: 204 LKDLSLSRKTFDWGIKIP------------------------------------------ 221
           ++D  +SR+   WG +IP                                          
Sbjct: 498 IRDWCISRQ-LWWGHRIPAYYATLKSKGGKPGSDADDNSHWISGRSESEARQKAAKLYNT 556

Query: 222 -------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
                     + ++  W  +     +  G+ +  +  +  F+P  L   G DIL F    
Sbjct: 557 TPDDIILTQDEDVLDTWFSSGLFPFSIFGWPEETEDLRI-FYPTSLLETGHDILFFWVAR 615

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + +    L   LP  +           G K+SKSLGNVIDP++VI+ + ++ L   L   
Sbjct: 616 MVFFGQKLLGKLPFKQVYLHPIVRDAHGRKMSKSLGNVIDPMDVIKGIALEDLHQQLYES 675

Query: 333 ----------------------------------IACGKDGFYDKDGLKKRVNADLANGI 358
                                              A       + D L+ +      N I
Sbjct: 676 NLDPSEVEKAKAGQKRDYPEGIPECGTDALRFALCAMCSGRDINLDILRVQGYRFFCNKI 735

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            N    +++    ++   +       E   D  +LS  +  +++      +     A   
Sbjct: 736 WNATKFALTYFSDEFQAPVDGGFVGNEKVMDLWMLSRLAAAVRDANHGFSHYEFPTATTA 795

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           + ++      D Y +  KP      +     T        +     LL  F+P +  +++
Sbjct: 796 IYNVWLYELCDVYLEYLKP-IFASGDEATKKTAQVTLYRALEVGLRLLSPFMPFITEELY 854

Query: 475 DILFVADENRC 485
             L    E R 
Sbjct: 855 QRLPRPKEIRD 865



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 21/158 (13%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R K  I           H+GHA    I D + R+HR+ G   L+  G D  G       +
Sbjct: 118 RGKFVIVIPPPNVTGSLHLGHALTNAIQDSIVRWHRMRGETTLWNPGCDHAGIATQVVVE 177

Query: 64  NAGV-----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
                                    + ++           L  S+D + R   T   R  
Sbjct: 178 KKLWRNEKKTRHDIGREGFISKVWEWKEEKGDRIYHQLKKLGSSFD-WDRAQFTMNPRLS 236

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 + ++ ++G IY+      +S   ++  +D EV
Sbjct: 237 RAVTEAFVRLHEEGYIYRANRLVNWSCTLKSAISDIEV 274


>gi|312216960|emb|CBX96909.1| hypothetical protein [Leptosphaeria maculans]
          Length = 725

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 8/183 (4%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R + Y+     YP+   H+GH     I+DVLAR+  + G  VL   G D  G     AA
Sbjct: 71  DRGEAYVLPMFPYPSGTLHLGHLRVYTISDVLARYKHMQGYKVLHPIGWDAFGLPAENAA 130

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD-----DFIRTTEKRHHDTCRILWKKISDKG 117
              GV  + +  QN    +    V+   +D       +RT +   +   + ++  + ++G
Sbjct: 131 IERGVHPEKWTLQNIEAMKAQMHVMGGRWDWDSLAQELRTCDPDFYKHTQRIFLMLHERG 190

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      Y   D+    +++V          A+   V+ +  + +F ++  +Q+ LL
Sbjct: 191 LAYQAESLVNYDPVDKTVLANEQVDANGCSWRSGAK---VEKVMLKQWFLKIKEFQEPLL 247

Query: 178 SYY 180
              
Sbjct: 248 KDL 250


>gi|42521981|ref|NP_967361.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|60390711|sp|Q6MQU3|SYL_BDEBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39574511|emb|CAE78015.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 796

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+A   H+GH       D+++R+ R++G +VL   G D  G    +
Sbjct: 28  SSKPKYYALDMFPYPSASGLHVGHMASYTPGDIISRYKRVNGFNVLHPMGYDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV   +   +   +FR        S+D    I T E  ++   + ++ K+ ++G 
Sbjct: 88  YAIQTGVHPAITTKKAIDSFRKTLQTFGFSFDWSREISTCEPDYYKWTQFIFLKLYERGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    +DEV  G          +PV  +  + +  +++ Y ++LL+
Sbjct: 148 AYQKEVPVNWCPALKTVLANDEVVDGKS----ERGGHPVIRVPMKQWMLKITDYAERLLN 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         E +   I   +
Sbjct: 204 DLDKLDWPERTKEGQRNWIGKSE 226



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 41/255 (16%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+              K+W P DL+V G +    H +Y   +         ++ +
Sbjct: 491 WYFLRYIDPKNTEAPFSPEAEKYWMPVDLYVGGPEHTVGHLLYARFWTKVLFDCGLVTHD 550

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +   GEK+SKS GNVI P ++    G DALR F+       KD  +  
Sbjct: 551 EPFQKLAHQGMILGPDGEKMSKSRGNVISPEDIARSHGADALRTFISFMGPVDKDKPWAP 610

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+         +G+   + R   +++ D   ++ T  A T     I  +  + ++++ E
Sbjct: 611 TGI---------DGVKRFLDRITRLVVNDDGQLVATSEALTP---EIEKLVHKTIKKVTE 658

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           ++++   + A++ ++ LV+E+ R                   +VL      ++ L  +L 
Sbjct: 659 DIESMSFNTAISAMMILVNELYR---------------AECRSVL-----AVKPLVQILA 698

Query: 464 AFVPKLANKIFDILF 478
            F P LA ++++ + 
Sbjct: 699 PFAPHLAEELWEKMN 713


>gi|261338976|ref|ZP_05966834.1| hypothetical protein ENTCAN_05179 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318805|gb|EFC57743.1| isoleucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 938

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E      + L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELHPNTLELMEEVAKRV 500

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EVDGIQAWWDLDARDILGADADNYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 669 FDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRADFIR 143


>gi|184155830|ref|YP_001844170.1| leucyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238692988|sp|B2GDF8|SYL_LACF3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|183227174|dbj|BAG27690.1| leucyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 805

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN  +FRD    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPADFTNQNVDHFRDQIQSLGFSYDWDREVNTTDPNYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 148 AYEDEIMVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 126/385 (32%), Gaps = 54/385 (14%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
               ++ K    K               N          Q Y  +  PV   ++      
Sbjct: 383 FLDGLNIKEAKAKMVEWLEEHDCGGKKVNYRLRDWIFSRQRYWGEPIPVIHWDDGTTSLV 442

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                              LP     E     +S L ++      +D   +        M
Sbjct: 443 PED-----------ELPLRLPETDNIEPSGTGESPLANIEDWVNVYDENGRHGKRETNTM 491

Query: 229 YVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
             W         Y   T   +        +W P DL+V G +    H +Y   +      
Sbjct: 492 PQWAGSSWYWLRYTDPTNDKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      
Sbjct: 552 LGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDQYGADTLRLYEMFMGPLE 611

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   +D+ GL         +G    V R   +++ D + +      +   D  +  V ++
Sbjct: 612 ESVPWDEKGL---------HGSNKWVQRVWRLLMDDNNHLRDRVSTYN--DGKLTKVYNQ 660

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++++ ++ +    + A++Q++  V+E  +                    V  + +E ++
Sbjct: 661 TVKKVTDDFERMHFNTAISQLMVFVNEAYK--------------------VDDLPLEYMK 700

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
               ++   +P LA +++     ++
Sbjct: 701 GFVKMIAPLMPHLAEELWSQFNESE 725


>gi|72080974|ref|YP_288032.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914098|gb|AAZ54009.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 790

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 4/206 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             R+K YI     YP+A   H+GH      +D++ARF RL+G DVL   G D  G    +
Sbjct: 26  TSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  +N  NF+        SY  D  I T++   +   + ++K +     
Sbjct: 86  YAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+ +  +G   + + N PV   + + +  +++ Y  KLL
Sbjct: 146 AEIREVEVNWCPELGTVLANEELKREKNGALVSERGNFPVILKKMKQWVLKITEYAQKLL 205

Query: 178 SYYESHPEFILPIERRNEVISFVKSG 203
              +           + + I   K  
Sbjct: 206 DGLDQVDFPDSLKTLQKKWIGKSKGW 231



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 118/343 (34%), Gaps = 47/343 (13%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + E+   +      +           +   P+    + + F K+
Sbjct: 402 WVFSRQRYWGEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKDWVFFEKN 461

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G      +     W         +I+      L                  K+ P DL++
Sbjct: 462 GKYYRRETNTMPQWSGSSWYYLAFILKEKDKYL------PLDSKIAYDKFKKWLPVDLYI 515

Query: 263 IGKDIL--------RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++           +H + + A ++  + P  K +     +   G+K+SKS GN I+P 
Sbjct: 516 GGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKIIHQGMLLGSDGQKMSKSKGNTINPT 575

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I++ G D +R FL+     G    +D++G+           I N + R    IL DY+
Sbjct: 576 EMIDKFGADTIRIFLMFMGPIGDLRLWDENGVVS---------IFNWIQRVQRTILADYE 626

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                     E D       +  + EI   ++    + A+++++  ++ +++        
Sbjct: 627 I-----DPELEKDYEFTYFFNNFVFEITNLIETFKFNVAISKLMVYINFLNK-------- 673

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                       +       +    I+   F P  A ++ + L
Sbjct: 674 ---------KQKIPS--KNYLTDFLIIFSVFAPHTAEELLEKL 705


>gi|318057563|ref|ZP_07976286.1| isoleucyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318080274|ref|ZP_07987606.1| isoleucyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 1048

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/402 (14%), Positives = 132/402 (32%), Gaps = 15/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +        G++ +   N V W  
Sbjct: 396 PHCWRCHTALLYYAQPSWYIRTTAVRDRLLEENEKTNWHPENVKHGRFGDWLKNNVDWAL 455

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    ++H   +  +   +E+    +SGL           +     
Sbjct: 456 SRKRYWGTP---LPVWRCPDNHLTCVGSLAELSELTGTDQSGLDPHRPYIDAVTFACPEC 512

Query: 222 DDP----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                  + ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 513 GAGATRVEEVIDAWYDSGSMPFAQWGYPYRNKELFEARYPAQFISEAIDQTRGWFYTLMA 572

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 573 IGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 632

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSV 393
                     +++ V   L      +  +++     ++      P        D  +LS 
Sbjct: 633 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSNWAPSAADPAPAERPVIDRWLLSE 692

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             ++   + E +++   HR    + + V ++  ++  +      + +     T      E
Sbjct: 693 LHKLTAGVTEALESYDTHRTGQLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 748

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+   VP +  +++  L V+ +    +S+     P
Sbjct: 749 VVETVTRLMAPLVPFVTERVWQDLVVSVDASASESVHMASWP 790



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  R+  + G  V    G D HG  +  A
Sbjct: 41  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRYRTMRGYHVGRKAGWDCHGLPVELA 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 101 VEKELGFTGKKDIEAYGIAEFNAKCRESVTRHTDAFTELTTRMGYWLDIDDAYRTMDPEY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DKG + +      +  +DE   +D E+ +G +
Sbjct: 161 VESVWWSLKQIFDKGLLVEDYRVAPWCPKDETGLSDHELAQGYE 204


>gi|323527126|ref|YP_004229279.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384128|gb|ADX56219.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 945

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+   +     I N + R +   L D+D          + E D   +++ + +  EI  
Sbjct: 665 LKRVTES--YRRIRNTL-RFLLANLSDFDYEKNARPVDDWLEIDRYAVALTANLQNEILA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           +      H  +A++ +  SE     Y D  K   L  T PD  +  +       + + L 
Sbjct: 722 HYDKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAPDSVARRSAQTALYHIAQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            L+  F+   A + + +     E
Sbjct: 781 RLMAPFLSFTAEEAWKVFQPNSE 803



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   + G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNMAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGDWDNPYKTMNFANEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|227515576|ref|ZP_03945625.1| leucine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086006|gb|EEI21318.1| leucine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|299783451|gb|ADJ41449.1| Leucine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 805

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+ Q  H+GH       DV++R  R+ G +VL   G D  G    +
Sbjct: 28  KDQKKYYALDMFPYPSGQGLHVGHPEGYTATDVMSRLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN  +FRD    L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPADFTNQNVDHFRDQIQSLGFSYDWDREVNTTDPNYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 148 AYEDEIMVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 125/385 (32%), Gaps = 54/385 (14%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
               ++ K    K               N          Q Y  +  PV   ++      
Sbjct: 383 FLDGLNIKEAKAKMVEWLEEHDCGGKKVNYRLRDWIFSRQRYWGEPIPVIHWDDGTTSLV 442

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                              LP     E     +S L ++      +D   +        M
Sbjct: 443 PED-----------ELPLRLPETDNIEPSGTGESPLANIEDWVNVYDENGRHGKRETNTM 491

Query: 229 YVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL----- 279
             W         Y   T   +        +W P DL+V G +    H +Y   +      
Sbjct: 492 PQWAGSSWYWLRYTDPTNDKEFASKEALDYWSPVDLYVGGAEHAVLHLLYARFWHKVLYD 551

Query: 280 ---LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +    P  K V     +    EK+SKS GNV++P +++++ G D LR + +      
Sbjct: 552 LGLVPTKEPFMKLVNQGMILGSNHEKMSKSKGNVVNPDDIVDQYGADTLRLYEMFMGPLE 611

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +   +D+ GL         +G    V R   +++ D + +      +   D  +  V ++
Sbjct: 612 ESVPWDEKGL---------HGSNKWVQRVWRLLMDDNNHLRDRVSTYN--DGKLTKVYNQ 660

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
            ++++ ++ +    + A++Q++  V+E  +                    V  + +E + 
Sbjct: 661 TVKKVTDDFERMHFNTAISQLMVFVNEAYK--------------------VDNLPLEYME 700

Query: 457 QLAILLQAFVPKLANKIFDILFVAD 481
               ++   +P LA +++     ++
Sbjct: 701 GFVKMIAPLMPHLAEELWSQFNESE 725


>gi|302533943|ref|ZP_07286285.1| isoleucyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442838|gb|EFL14654.1| isoleucyl-tRNA synthetase [Streptomyces sp. C]
          Length = 1048

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/402 (13%), Positives = 134/402 (33%), Gaps = 13/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +   ++  E    +        G++ +  +N + W  
Sbjct: 396 PHCWRCHTALLYYAQPSWYIRTTAVKDAMLRENEKTNWFPDSVKQGRFGDWLNNNIDWAL 455

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         ++  L+   S  E      + +  +   +  + D++         
Sbjct: 456 SRNRYWGTPLPIWRCEENHLTCVGSRAELSELTGQDHSALDPHRPYIDDVTFPCTAEGCS 515

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           +     P+ ++  W D+ +      GY         K +PA       D     F+ +  
Sbjct: 516 LTAVRVPE-VIDAWYDSGSMPFAQWGYPYKNKEIFEKRYPAQFISEAIDQTRGWFYTLMA 574

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 575 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 634

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++     ++      P     T  D  +LS 
Sbjct: 635 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSNWAPSAADPAPADRTVLDRWLLSE 694

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              ++ E+ + M+     RA   + + V ++  ++  +      + +     T      +
Sbjct: 695 LHTLVTEVTDAMEAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDAAALRT----LHD 750

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+    P +  +++  + V       +S+     P
Sbjct: 751 VVETVTRLMAPLTPFITERVWQDMVVPVTPDAPESVHLSTWP 792



 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 41  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 100

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 101 VEKELGFNGKQDIEAYGIAEFNAKCRESVTRHTDAFTELTTRMGYWVDLDDAYRTMDPEY 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 161 VESVWWSLKEIFNKGLLTQDHRVAPWCPRCGTGLSDHELAQGYE 204


>gi|254444046|ref|ZP_05057522.1| leucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258354|gb|EDY82662.1| leucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 871

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++EK ++     YP+    HIGH      +D+LAR+ R  G +VL   G D  G    +
Sbjct: 48  SDKEKFFVLDMFPYPSGAGLHIGHPLGYTGSDILARYKRAQGKNVLHPIGWDAFGLATEQ 107

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +    +   +FR     +  S  YD  + TT+ +++   + ++ ++  +G 
Sbjct: 108 YAIKTGKHPRTTSVERIGHFRKQLKTIGFSFDYDREVDTTDPKYYRWTQWIFLQLFKRGL 167

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y      W+    +    ++EV  G         ++PV          +++ Y D+L+ 
Sbjct: 168 AYVDMRPVWWCDELKTVLANEEVIDGKS----ERGNHPVVRRNLRQVVLKITEYADRLIE 223

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + + E I
Sbjct: 224 DLKDVDWPASTKKMQAEWI 242



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 92/264 (34%), Gaps = 40/264 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA-DLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+              ++W   D++V G +    H +Y   +    
Sbjct: 556 PQWAGSCW--YYLRYMDPHNEDALASPEALEYWKTPDMYVGGAEHAVLHLLYARFWHKVL 613

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  K       +   G+KISKS GN +DP+ V+ E G D +R +L+    
Sbjct: 614 YDAGVVKNKEPFRKLFHQGMLLGEDGKKISKSAGNGVDPVSVVNEYGADTMRMYLMFLGP 673

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                       +K  N+    GI   ++++   I+     +        +  +    + 
Sbjct: 674 L---------EARKPWNSKGIGGISRFLNKAWREIVGKDGELNSKIQDGYQDSKETEKLL 724

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
              ++++ E++     + A++Q++ L++             L+       +T        
Sbjct: 725 HETIKKVSEDLDALSFNTAISQLMILINH------------LQGQEAISLATA------- 765

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
            +    ++    P +  +++  L 
Sbjct: 766 -KAFVQMIAPMAPHIGEELWSRLG 788


>gi|157363246|ref|YP_001470013.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980059|sp|A8F465|SYI_THELT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157313850|gb|ABV32949.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 911

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 119/341 (34%), Gaps = 17/341 (4%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLS-YYESHPEFILPIERRNEVISFVKSGLKDL 207
             +   +  +        FR S   + +L      H   I+     N      +  L  L
Sbjct: 445 RPDWCISRQRAWGTPIPAFRCSKCSEVVLDARLIRHFAEIVKKMGTNAWFELSEKQL--L 502

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                    G +        + VWID+ ++      +           +PAD+++ G D 
Sbjct: 503 PDGYVCPHCGSEDLVKMNDTLDVWIDSGSS------FEAVLTTRPELTFPADMYLEGSDQ 556

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F++    + +     P    +        +G+K+SKSLGNV+DP+EV  + G D L
Sbjct: 557 HRGWFNSSLVLSVITHDKPPYKTVLTHGFIKDAEGKKMSKSLGNVVDPLEVCSKYGADVL 616

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R +L        D    K+ + ++V  ++   I N +   +  +                
Sbjct: 617 RLWLASSDYF-NDIRISKNIIFQQV--EVYKKIRNTIRYLLGNLQDFSVTDSIGFQKMLP 673

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD- 442
            D   L    ++++ + E  ++    +A   ++   S E+   Y D  K     +     
Sbjct: 674 VDRWALGRLQQIIKSVTEAYESYEFSKAYNILVKYCSVELSAIYLDIVKDRLYVEGKHSL 733

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           +  +   V   +++ L ++    +     + ++ L   ++ 
Sbjct: 734 KRRSAQTVLYNILKSLLVMFSPILAFTCEEAYEFLNFGEKK 774



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 51/177 (28%), Gaps = 15/177 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      +     Y N   HIG A   I+ D++ R+  L G    +  G D HG  I   
Sbjct: 45  ENNPTFVLHDGPPYANGDIHIGTAMNKILKDIVVRYKTLRGFKSPYVPGWDTHGLPIEHK 104

Query: 62  A-------------QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + F  Q     +     L +   ++++  T    +    
Sbjct: 105 VTTMLGEKARSMSQTELRKACEEFAKQQIEMQKKQFQRLGVIGDWENYYATLNPEYEYKI 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
             ++ K+ + G +Y+      +           E+               ++  E E
Sbjct: 165 YEIFAKLVEDGYVYRALKPVLWCNNCGTALAQAEIEYHDHDSPSIYVKFKMENSENE 221


>gi|121701241|ref|XP_001268885.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus clavatus NRRL
           1]
 gi|119397028|gb|EAW07459.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus clavatus NRRL
           1]
          Length = 1077

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  ++E  G DALR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMERYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 344 ---DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSR 396
                +  +V   L N       ++      + +     P A        D  IL+ C  
Sbjct: 641 AGVKEIVAKVLLPLWNSYKFFEGQAALFKKNNGEDFAFDPKAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   +     L    E++
Sbjct: 701 LLKFVNEEMAAYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGENGVNDTLHALNTLFEIL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F P + + I+  L
Sbjct: 761 YTLVRGLAPFTPFITDTIYQKL 782



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 90  IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRFASEWRETIERLGRWIDFDNDYKTMNASF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ +K  +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKQLFEKDLVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|227517927|ref|ZP_03947976.1| possible isoleucyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074615|gb|EEI12578.1| possible isoleucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 404

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 102/266 (38%), Gaps = 24/266 (9%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ +++             +   +PAD+++ G D     F++    +  ++   P
Sbjct: 1   MDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAP 54

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D     D 
Sbjct: 55  YKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEADVRVSMDI 113

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRVLQE 400
           L      +  + +   +  ++  +L +     P             D+ +    ++V+QE
Sbjct: 114 L------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQE 167

Query: 401 IREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT-VEVIR 456
           IREN  +          V++   V     Y D  K     +   D     +     + + 
Sbjct: 168 IRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLV 227

Query: 457 QLAILLQAFVPKLANKIFDILFVADE 482
            L  LL   +P  A +I+  L   +E
Sbjct: 228 SLTKLLTPIIPHTAEEIWSFLQEEEE 253


>gi|302876106|ref|YP_003844739.1| leucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307686831|ref|ZP_07629277.1| leucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578963|gb|ADL52975.1| leucyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 808

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 9/234 (3%)

Query: 2   KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+EKLY+    +YP+  Q H GH +     D  ARF ++ G +V    G D  G     
Sbjct: 27  SEKEKLYVLEMFSYPSGAQLHAGHWFNYGPVDSWARFKKMQGYNVFQPMGFDAFGLPAEN 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+       +N          +    ++D  + T +  ++   + L+ K+ +K  
Sbjct: 87  YAIKTGIHPMDSTLKNIETMEKQLRAMGAMFNWDHEVVTCKPDYYKWTQWLFLKLYEKNL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         +++V  G          + V       +F +++ Y D+LL 
Sbjct: 147 AYRKNAPVNWCPSCNTVLANEQVIDGH----CERCDSEVTKKNLTQWFLKITDYADELLD 202

Query: 179 YYESHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +           +   I   K       +  S  +FD      D    + YV
Sbjct: 203 GIDGLDWPEKTKAMQKHWIGKSKGAEATFKVKDSDLSFDVFTTRVDTLNGVTYV 256



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 113/314 (35%), Gaps = 39/314 (12%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKAK- 254
           + F   G   L+ S    +        P +  +      + +      Y+DN +  KA  
Sbjct: 449 VEFAPDGKSPLAKSESFVNTTCPKCGGPAHRDVDTLDTFVCSSWYFLRYVDNLNSEKAWD 508

Query: 255 ------FWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG 300
                   P D +V G +    H +Y             ++ + P          +   G
Sbjct: 509 VDKVNAMVPVDKYVGGPEHATMHLLYARFVTKALRDMGLVNIDEPFKSLTHQGLILGPDG 568

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN I P   I E G D  R +L+      + G +  D +K    A   + +  
Sbjct: 569 LKMSKSKGNTISPDTYISEFGADVFRMYLMFGFDYTEGGPWSDDAIKS--MARFVDRVER 626

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +++ +V       +       +  ++++ +  V    ++ +  +M     + ++A+++  
Sbjct: 627 VITSAVE------EMKKSGKTSIDKAEKDLNFVRHNTIKSVLFDMDKMQFNTSIARIMEF 680

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-- 478
            + + +Y +            +  ++      EV+     +L  F P  A ++++ +   
Sbjct: 681 TNALSKYLNE-----------EEKNSAF--IKEVVIDYLRILAPFAPHFAEEMWETIGGN 727

Query: 479 VADENRCFQSLDQR 492
            +  N  F + D++
Sbjct: 728 FSIFNESFPTFDEK 741


>gi|257051293|ref|YP_003129126.1| valyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256690056|gb|ACV10393.1| valyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 905

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 68/458 (14%), Positives = 145/458 (31%), Gaps = 48/458 (10%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE G    +A +  G++T    +       D+ D   +         
Sbjct: 309 WYQAHDLPLRIAIDESGTMTDRAGEYEGLST---TEAREAIIADLDDAGHLLESR----- 360

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
              HH + ++  +  ++   +    +        E Y            + +    + ++
Sbjct: 361 --DHHHSVQVHERCETEVEYLVTEQWYVDMLDSTEEYLEAGREMDWYPEKMFTRYKHWIE 418

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +E +    R          +Y       +  +R +  +  +       S      + G 
Sbjct: 419 GLEWDWCISRQRDSGIPFPVWYCEDCGEPVFADREDLPVDPLSDDPPVDSC----PECGG 474

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF----------------WPADLHV 262
              +    +   W  +    L   G+   P    A+                 +P +L  
Sbjct: 475 ADFEPESDVFDTWATSSLTPLINAGWDWQPADESAETADSVDAGEFTFDNPELYPMNLRP 534

Query: 263 IGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G DI+ F   +     +  +  +P    + +   +    E +SKS GNV+ P  V+E+ 
Sbjct: 535 QGHDIISFWLFHTVVKCYEHTGEIPFDTVMVNGMVLDENREAMSKSKGNVVSPEAVLEDF 594

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
            VDA RY+     + G D  + ++ L+      L   + N       +   +       P
Sbjct: 595 PVDATRYW-AAGTSIGDDFPFKENDLEA--GERLLQKLWNASKLVDQLAPGN---NYEEP 648

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
                 DE +L+     ++ + E +      +A  ++ +       D Y +      + K
Sbjct: 649 EDLAAIDEWLLAKLDDTIESLTEKLDTYEFSKARNELRTFFWSTFCDDYLE------IAK 702

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              D+++   Y  V   R    L   F+P +  +I+  
Sbjct: 703 QRDDKSAA--YTLVTAHRTFLKLFAPFLPHVVEEIWQA 738



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 15/142 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I T     +   H+GH Y+  + D +ARF R+    V F  G D++G    +  +   
Sbjct: 58  FTIDTPPPTVSGSLHMGHLYQFTLQDFVARFRRMTDDTVYFPFGYDDNGIASERLTEREL 117

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWK 111
                          T+         F +    L IS  +D+  +T E R     ++ + 
Sbjct: 118 DIRHSDFERREFQEKTRDVCADYEDAFTEDVQSLAISVDWDNTYKTIEPRVQRISQLSFL 177

Query: 112 KISDKGDIYKGCYSGWYSLRDE 133
            + ++G  Y+      +    E
Sbjct: 178 DLYEQGKEYRQRAPTIWCPDCE 199


>gi|257888996|ref|ZP_05668649.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897590|ref|ZP_05677243.1| leucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257825059|gb|EEV51982.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257834155|gb|EEV60576.1| leucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 804

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + +     +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVQKAAYTEDGTHINSEFLDGMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWSILG 721


>gi|300727136|ref|ZP_07060555.1| isoleucine--tRNA ligase [Prevotella bryantii B14]
 gi|299775680|gb|EFI72271.1| isoleucine--tRNA ligase [Prevotella bryantii B14]
          Length = 1222

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 109/296 (36%), Gaps = 38/296 (12%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK------------------------ 254
           K       ++ VW D+ +       Y      +                           
Sbjct: 665 KPMYRESDLIDVWFDSGSMPYAQQHYPFEGAMNAEALAATGKSEAEYREELVHSTYTGIP 724

Query: 255 ----FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               ++PAD    G D     F  ++  + ++   +     + S   +  KG K+SK +G
Sbjct: 725 VPPAYYPADFINEGVDQTRGWFFTLHAISTMVFDQVAFKNVISSGLVLDAKGNKMSKHVG 784

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV +P E+I++ G D +R++++       +  +D +G+ +                ++  
Sbjct: 785 NVTNPFEMIDKYGADPVRFYMLTNSEPWDNLKFDPNGVDETRRKFFGTLYNTYSFFALYA 844

Query: 369 ILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
            + ++D   P        E D  ILS  + +++ +++ + +    RA   + S V++   
Sbjct: 845 NVDNFDVDAPQVAFEKRPEIDRWILSCLNTLVKNVQKELDSYDPTRAGRLIESFVNDDLS 904

Query: 425 DRY--FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           + Y   + ++ W   K   +   +        +  +A ++  F P  A++++  L 
Sbjct: 905 NWYVRLNRKRFW--GKEMSEDKLSAYQTLYACLMTVAKVVAPFAPFFADQLYKDLG 958



 Score = 53.2 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARSIKDTFNRYKTMQGFQVHRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V   ++ +R + + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASEKYISVEDYNKKCRENVMMFTQEWRTLTEEMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPGAGTGLSSHELNQPGC 206


>gi|293571995|ref|ZP_06683008.1| leucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607919|gb|EFF37228.1| leucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 804

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 138/415 (33%), Gaps = 62/415 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + N     +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVQKAAYTEDGTHINSEFLNGMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                               V  +  E I     LL    P +  +++ IL   D
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHIGEELWSILGNED 724


>gi|293553706|ref|ZP_06674329.1| leucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602132|gb|EFF32361.1| leucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 804

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + +     +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVEKAAYTEDGTHINSEFLDGMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWAILG 721


>gi|148284275|ref|YP_001248365.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|189030293|sp|A5CCT4|SYL_ORITB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146739714|emb|CAM79534.1| leucyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 838

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 6/205 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI     YP+ + H+GH     I DV+ARF R  G +VL   G D  G     AA
Sbjct: 27  NKIKRYILPMFPYPSGKAHVGHVRNYTICDVIARFERSQGHNVLHAMGWDAFGLPAENAA 86

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    +V  N    R     + +SYD    I T   +++   +  + ++  KG +Y
Sbjct: 87  MQNNTYPNSWVSSNVDVMRQQLKAIGLSYDWSREIITCSSQYYVHEQRFFLEMLKKGLVY 146

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+    +++V  G            +++   + +F +++ Y D LL   
Sbjct: 147 QKESLVNWDPIDQTVLANEQVINGKG----WRSGAIIEYRNLKQWFIKITNYADALLKGL 202

Query: 181 ESHPEFILPIERRNEVISFVKSGLK 205
           +S   +   ++   +      +G+ 
Sbjct: 203 DSLKGWPESVKTMQKKWIGQSTGIN 227



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 68/478 (14%), Positives = 138/478 (28%), Gaps = 104/478 (21%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
           DE   +IAK  +          ++N    ++      I  + F                 
Sbjct: 338 DERDHEIAKLLKLNIKQVITSTERNIDVLKEAYVGDGIMINSFH--------------LN 383

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            ++      K      +    +   N      G   Q +     P+   +  G       
Sbjct: 384 GLTTTEARQKVINELQHKNIGQQVTNYKLKDWGISRQRFWGCPIPIIHCKSCGAVPVPYE 443

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
               +L  +             +    +VK     L   R+T  +               
Sbjct: 444 DLPVILPEHGVEFTGKGNPLDNHHSWKYVKCPKCHLDAVRETDTFDT------------- 490

Query: 232 IDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFLLSA----- 282
               + Y        + D   AK    + P D ++ G +    H +Y             
Sbjct: 491 FFESSWYFARFCNPTSDDMVDAKAAKYWLPVDQYIGGIEHAVMHLLYARFITRVMYDLKY 550

Query: 283 --------------------------NLPLPKKVFS------------HGFILHKGEKIS 304
                                     N   P +V                  + K EK+S
Sbjct: 551 IDIQEPFTSLITQGMVLHRTYQDKSNNWLYPNEVEVDSNGQLRCKADLQYVTVGKLEKMS 610

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS  NV+D   V++  G D  R F++ +    KD  +  +G++          + N    
Sbjct: 611 KSKKNVVDLELVLKLYGADVARMFVLSDTPPEKDLEWSTEGIEGCY--KFIQKLYNFA-- 666

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              + LK+ +          + D+ +LS   + ++ + +++ +  +++A+A++  L + +
Sbjct: 667 ---LKLKNINLTD------NKIDKVLLSKTHKTIKNVTQDIISCRLNKAIARLRELYNLI 717

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +                  S +     E    L  L   F+P L+ +I+ +L    E
Sbjct: 718 FK-----------------MSELTVQIKESFLILIRLFNPFIPHLSEEIWSLLSGRGE 758


>gi|313125097|ref|YP_004035361.1| valyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291462|gb|ADQ65922.1| valyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 870

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 130/369 (35%), Gaps = 23/369 (6%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +    Y       DE      E+    +  +   + N ++ ++ +    R  +      
Sbjct: 352 LVKDQWYVELLDKTDEYLEAGREMDWYPEKMFTRYK-NWIEGLQWDWSISRQRSSGIPFP 410

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
            +Y    E ++  ER N  +  +       +      D  +        +   W  +   
Sbjct: 411 VWYCDDCEHVVVAERENLPVDPLSDDPPVDTCPECDHDEFVP----EDDVFDTWATSSLT 466

Query: 238 YLTTTGYLDNPD-----GSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKV 290
            L   G+  + D       + + +P D+   G DI+ F   +     +  +  +P    +
Sbjct: 467 PLINAGWDWDEDAEEIVIDREELYPFDVRPQGHDIISFWLFHTVVKCYEHTGEVPFDSVM 526

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            +   +    EK+SKS GNV+ P EV+ +  VDA RY+     A G D  Y + GL  R 
Sbjct: 527 INGMVLDENREKMSKSKGNVVSPDEVMSKYPVDAARYW-AAGSAVGDDLPYSEKGL--RA 583

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
              L   + N  S+ V  + +D            + D  +L+   R ++ + E +QN+  
Sbjct: 584 GEKLLRKLWN-ASKLVDSLSEDAPESF-DHDDLKQIDRWLLASLDREIEHVTEKLQNREF 641

Query: 411 HRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            +A   + S       D Y +  K    +  +     +  Y      R+   L    +  
Sbjct: 642 SKARDDLRSFFWNTFCDDYLEIAKQRVRESDDE----SAKYTLRTAHRRFLKLFAPILAH 697

Query: 469 LANKIFDIL 477
           +  +++  +
Sbjct: 698 VTEELWREM 706



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I +     +   H GHAY   + D +ARF+R+ G +V F  G D++G    +  ++  
Sbjct: 38  FSIDSPPPTVSGSLHWGHAYGFTLQDFVARFNRMRGKEVFFPFGFDDNGIASERLTEDEL 97

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWK 111
                           +   +Q    F +    L IS  +D   +T         ++ + 
Sbjct: 98  DVRHQDYDRREFQEMCREVCEQYEAEFTEKMQNLGISIDWDQTYQTISPEVQRASQLSFI 157

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++ D G  Y+      +    E   +  E      G +++     V   EEE
Sbjct: 158 ELYDDGREYRQRAPAIWCPECETAISQVETEDDEQGSHFHDIEFEVVDSEEE 209


>gi|257886337|ref|ZP_05665990.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257822193|gb|EEV49323.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 804

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + +     +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVEKAAYTEDGTHINSEFLDGMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWAILG 721


>gi|157147566|ref|YP_001454885.1| isoleucyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166200204|sp|A8ALT6|SYI_CITK8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157084771|gb|ABV14449.1| hypothetical protein CKO_03366 [Citrobacter koseri ATCC BAA-895]
          Length = 938

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRAIELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDPKEILGDDADQYVKVPDTLDVWFDSGSTHASVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        +I +  +    H  + +++   S      Y
Sbjct: 668 GFDPVKDMVKPEEMVVLDRWAVGCAKAAQDDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQSALYHIAEALVRWMAPIMSFTADEIWGYLPGDREKYVF 787



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFHAADQDAVKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S+    +     +   + LP  R
Sbjct: 226 FGVSSVNGPISLVIWTTTPWTLPANR 251


>gi|296101200|ref|YP_003611346.1| isoleucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055659|gb|ADF60397.1| isoleucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 938

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/401 (15%), Positives = 129/401 (32%), Gaps = 46/401 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V     G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLREQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ------ 225
           +          + +P+      E      + L+ +    K  +  GI+   D        
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETHELHPNTLELMEEVAKRVEVDGIQAWWDLDARDILG 518

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + + +         G       AD+++ G D     F + 
Sbjct: 519 ADADNYEKVPDTLDVWFDSGSTHASVVDVRPEFAGHA-----ADMYLEGSDQHRGWFMSS 573

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++    
Sbjct: 574 LMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTD 633

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
             G+    D+  + KR     A      +  +   +L + +G  P      P      D 
Sbjct: 634 YTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDR 686

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
             +       ++I +  ++   H  + +++   S      Y D  K  +   K +     
Sbjct: 687 WAVGCAKAAQEDIVKAYESYDFHEVVQRLMRFCSIEMGSFYLDIIKDRQYTAKADSVARR 746

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 SCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 787



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRADFIR 143


>gi|270291589|ref|ZP_06197809.1| leucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270279908|gb|EFA25746.1| leucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 805

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ Q  H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 28  EQKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F   N +NF+     L  SYD    + TT+  ++   + +++++  KG 
Sbjct: 88  YAMKTGNNPKDFTAHNIKNFKRQIQSLGFSYDWSREVNTTDPEYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWYSL--RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      ++          ++EV  G   +       PV     + +  +++AY D+L
Sbjct: 148 AYEKETLVNWAPDLMGGTVVANEEVVNGKTERGGF----PVYRKPMKQWILKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVI 197
           +   +         E +   I
Sbjct: 204 IDDLDLVDWPDSIKEMQKNWI 224



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 144/424 (33%), Gaps = 62/424 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            + R ++  R     I      G++ +  Y+G     +  + +     + + K  D    
Sbjct: 343 HDPRDYEFARKFKIDIVPVIGGGNLDEEAYTGDGPHINSGFLDGLNKQEAIDKMLDWLEE 402

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           +   +         + F    Y  + +                     LP     +    
Sbjct: 403 HGAGHKKVNYRLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPATDNIKPSGT 462

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D    K W
Sbjct: 463 GESPLANLEDWLNVVDENGRKGRRETNTMPQWAGSSWYFLRYVDPKNQNKIADEDLLKEW 522

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 523 LPVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSK 582

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++E  G D LR + +      +   + ++GL         NG    + R   
Sbjct: 583 GNVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSEEGL---------NGSRKWIERVWR 633

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ D + +          D  +  + ++ ++++ E+ +N   + A++Q++  V+E  + 
Sbjct: 634 LMIDDNNHLRDRITMIN--DHKLDLIYNQTVKKVTEDYENMRFNTAISQMMVFVNEAYK- 690

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
                           A  +  V +E    L  LL   VP +A +I+ I+   +E   ++
Sbjct: 691 ----------------ADALPMVYME---GLVKLLSPIVPHVAEEIWQIMG-HEETITYE 730

Query: 488 SLDQ 491
           +   
Sbjct: 731 AWPT 734


>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 921

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 133/353 (37%), Gaps = 34/353 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N +
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHE 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
               +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGVTEESVQLTDMPEAVQ 787



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|42557781|emb|CAF28754.1| putative valyl tRNA synthetase [uncultured crenarchaeote]
          Length = 781

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 131/397 (32%), Gaps = 30/397 (7%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           + +   + + G + K           E   +  E+    D         P          
Sbjct: 318 KKIIDDLENAGYVVKQESILHRIPMCERSKSPVEIIPMQDYYIKQLDFLPKLREFASSLK 377

Query: 167 FRLSAYQDKLLSYYESHPEFI-----------LPIERRNEVISFV-------KSGLKDLS 208
           F   +++  LL++ +S                +PI   N+    +           KD +
Sbjct: 378 FYPESHRQILLNWLDSVAIDWPISRRRFYGTEIPIWYCNKCKEPMLPEPGKYYRPWKDKA 437

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              K    G       +     W+D+  + L  T Y  + D   AK +P  +    KDI+
Sbjct: 438 PFDKCVKCGHSEFTGDERTFDTWMDSSISPLFVTKYSKDVDF-FAKTYPTQIRPQAKDIV 496

Query: 269 RFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           R    Y     + L+  L           +   GEK+SKS GNVIDP  VI + G D  R
Sbjct: 497 RTWLYYTMLRCYQLTEKLAWSDVWIMGYGVDEYGEKMSKSKGNVIDPFPVINKHGADTFR 556

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++   E   G+D    +  + +         + N+     S     ++ +         S
Sbjct: 557 FWSAIEANHGQDFRCSEQKIAEAQ--KFLTKLWNIGRFVSS-----FEFIRTVEVDLLPS 609

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D+ IL   S ++ E  +  +        +Q+           Y +  K       + +  
Sbjct: 610 DKWILGELSNLVAECIKGYREYNFFIPASQIRDFTWNIFASHYLELVKSRAYNDQDQNSR 669

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + LY   +    + +LL    P +  K++  ++  +
Sbjct: 670 YSALYALHKCFSVILLLLAPICPFITEKLWTTIYSKE 706



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 16/159 (10%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + + +   I T   YP+ +P HIG A      D++AR  R+ G +V F  G D +G  + 
Sbjct: 32  VSDNKNYVIDTPPPYPSGRPWHIGAAAHYAQIDMIARTTRMFGNNVYFPIGIDRNGLPVE 91

Query: 60  KAAQNAG-----VTTKVFVDQNS--------RNFRDMADVLDISYD--DFIRTTEKRHHD 104
              +         T +    +          +    +   + +S D  D+ RT    +  
Sbjct: 92  IYTEKKHKIRMRQTDREEFLRLCRISLDDLEKEMIQIMKSIGLSADFADYYRTDSDEYRT 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +  +  +G +Y       Y         D E+  
Sbjct: 152 LTQSTFIDLWGRGLVYSANRPNNYCPSCGTTIADAEITY 190


>gi|119470026|ref|ZP_01612831.1| isoleucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446736|gb|EAW28009.1| isoleucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 942

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 101/279 (36%), Gaps = 17/279 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     Q  + VW D+  ++                  PADL++ G D     F +    
Sbjct: 529 KQYMKVQDTLDVWFDSGVSHACVVD------ARDELVGPADLYLEGSDQHRGWFMSSMMT 582

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  ++ + P  + +     +   G K+SKSLGNVI P  V+ ++G D LR ++       
Sbjct: 583 SVAINGHAPYKQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVASTDYTA 642

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVC 394
           +      +  K+   AD    I N  SR +   L  +D            E D+ I+   
Sbjct: 643 EMTV-SDEIFKRS--ADRYRRIRNT-SRYLLANLNGFDPKTDQVAVDDMVELDKWIVGRA 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRASTVLYVT 451
           +++  EI     +  +     ++++         Y D  K  +   K++     +     
Sbjct: 699 AQLQDEILAAYDSYQMLLVTQKLMNFCTGELGSFYLDVIKDRQYTAKSDSHARRSCQTAL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             +   +   +   +   A +I++ L     +  F S+ 
Sbjct: 759 YHIAEAMTRWMAPIMSFTAQEIWEALPGERSDYVFTSVW 797



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GH+   I+ D++ +   L   D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGDIHLGHSVNKILKDIIVKSKTLSDFDSPYIPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T         
Sbjct: 106 VEKKVGKPGVKVTASEFREKCRAYAKKQVEGQKVDFKRLGVFADWDKPYLTMNFDFEANA 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +I   G ++KG     +     +   + EV  
Sbjct: 166 IRVLGRIIKNGHLHKGAKPVHWCTDCGSALAEAEVEY 202


>gi|116624431|ref|YP_826587.1| isoleucyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227593|gb|ABJ86302.1| Isoleucyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 939

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 79/468 (16%), Positives = 130/468 (27%), Gaps = 40/468 (8%)

Query: 27  EMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADV 86
                D   RF R +G         D  G+ I +          V     +       + 
Sbjct: 354 TFCPVDAAGRFFRAEGAPGHIP--DDLIGKTIWEG------NPLVVEHLKAAGALLGMEK 405

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK-----GCYSGWYSLRDEAYYNDDEV 141
           L  SY    R             +  +                        E   N   V
Sbjct: 406 LAHSYPHCWRCHNPVIFRATEQWFIGMERNNFRQSALDAIKKVKWMPEWGQERISNMIAV 465

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                         P+     EG    ++                +      +       
Sbjct: 466 RPDWCISRQRVWGVPITIFYCEGCREPVTD------RKLLDPIVALFREHTADIWYEKTA 519

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           + L            G         I+ VW D+ +++L                WPAD++
Sbjct: 520 AELLPADYKCTKCGGG--EFSKETDILDVWFDSGSSHLAVLN------QRFGLEWPADVY 571

Query: 262 VIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + G D     FH+       L    P    + +   +  +G+ + KSLGN I+P  VI++
Sbjct: 572 LEGGDQYRGWFHSSLLVGTGLRGGSPYRACLLNGWVLDGEGKAMHKSLGNSIEPESVIKD 631

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
            G D LR +    +   +D       L + V  D    + N   R +   L D+D     
Sbjct: 632 HGADILRLW-TASVEFNEDVRMSDTILTRLV--DAYRKLRNTF-RYMLGNLSDFDPQADS 687

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWE 435
             P   TE D+ IL     ++   R        H+    V +   V     YFD  K   
Sbjct: 688 VAPAELTELDQWILLRADDLVTRCRAWYDEFAFHKIYHAVYAFATVDLSSVYFDVLKD-R 746

Query: 436 LKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           L  +                ++  L  LL   +   A +++  +   D
Sbjct: 747 LYCSGAKWPERRAAQTTLYRLMDGLVRLLAPMMSFTAEEVWGHMKRPD 794



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 54/156 (34%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N + H+G A+  I+ D + +   + G D  +  G D HG  I    
Sbjct: 51  GRPTYVLHDGPPYANGRIHLGTAFNKILKDFVVKSKTMAGFDSPYVPGWDCHGLPIEIKV 110

Query: 63  QNAGVTTKV--FVDQNSRNFRDMADVL-DISYDDFIR------------TTEKRHHDTCR 107
            +   + K      Q  R  R  A+   DI   DF R            T    +     
Sbjct: 111 DSELGSKKAQMTAVQIRRACRKYAEKYVDIQRTDFKRLGVLGHWEDPYLTMSAEYQSVIA 170

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +    D+G +YKG     + ++D     + EV  
Sbjct: 171 GAFVDFLDRGYVYKGLKPVHWCIKDRTALAEAEVEY 206


>gi|69244089|ref|ZP_00602625.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Enterococcus faecium DO]
 gi|257880449|ref|ZP_05660102.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883262|ref|ZP_05662915.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891521|ref|ZP_05671174.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894538|ref|ZP_05674191.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614095|ref|ZP_05711865.1| leucyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562448|ref|ZP_05832958.1| leucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206894|ref|ZP_05921584.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289567063|ref|ZP_06447460.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293563981|ref|ZP_06678388.1| leucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293569437|ref|ZP_06680733.1| leucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294613887|ref|ZP_06693825.1| leucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619132|ref|ZP_06698624.1| leucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294622191|ref|ZP_06701256.1| leucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314943342|ref|ZP_07850117.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949258|ref|ZP_07852604.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314953916|ref|ZP_07856774.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993194|ref|ZP_07858575.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997356|ref|ZP_07862313.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68196546|gb|EAN10972.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Enterococcus faecium DO]
 gi|257814677|gb|EEV43435.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818920|gb|EEV46248.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827881|gb|EEV54507.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830917|gb|EEV57524.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073133|gb|EEW61478.1| leucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260078872|gb|EEW66573.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161142|gb|EFD09045.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587857|gb|EFF19709.1| leucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291593252|gb|EFF24823.1| leucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594618|gb|EFF26003.1| leucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598288|gb|EFF29380.1| leucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604071|gb|EFF33598.1| leucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313588570|gb|EFR67415.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592308|gb|EFR71153.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594115|gb|EFR72960.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313597954|gb|EFR76799.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313644357|gb|EFS08937.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 804

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + +     +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVEKAAYTEDGTHINSEFLDGMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWAILG 721


>gi|256810785|ref|YP_003128154.1| isoleucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793985|gb|ACV24654.1| isoleucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 1039

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 138/391 (35%), Gaps = 35/391 (8%)

Query: 102 HHDTCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
              T +   +    K +I +            +  Y N  +     +         P+  
Sbjct: 414 FRATEQWFLEISKIKDNIIEHAKTVQWIPHWVETRYINGVKFVGDWNISRQRYWGIPLPV 473

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW--G 217
              E               Y        L  +  N+      + L   ++ +       G
Sbjct: 474 WVCEKCG-----------KYVVVGSVEELEEKMINKDEVGEINDLHKPTVDKIKLRCECG 522

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            ++   P  ++ VW D+      + G              AD    G D +   F++ + 
Sbjct: 523 GEMKRVPD-VLDVWFDSGLAPYASIGSKTLKK--------ADFITEGNDQVTKWFYSQHA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            + ++  ++P  K +     +   G+K+SKSLGN+++P +V+E+ G D LR++L+     
Sbjct: 574 LSAIVFNDIPYKKCLMHGFTLDEHGDKMSKSLGNIVNPDDVVEKYGADLLRFYLLSANKV 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVC 394
            +D  +    +   ++  L N + N    +V  M+L ++           + D+ ILS  
Sbjct: 634 WEDLRFVWSEMDDVLS--LFNTLWNAYMFAVNYMVLDNFKPDEKYFEYLKDEDKWILSRI 691

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYV 450
           + V +   EN++    H     +   +       Y      + W+ +K + D+ +     
Sbjct: 692 NTVAKIAIENLEVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWK-EKEDVDKLAA-YQT 749

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              V+ +LA +L    P  A  I+  L   D
Sbjct: 750 LYYVLLKLATILAPVAPHTAEAIYQNLKTED 780



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 20/186 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  ++ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I   
Sbjct: 34  EGNKEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVK 93

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +N                       K F  ++     +    L +   +++      K 
Sbjct: 94  VENEFGIKNKKEIETKIGVEEFIEKCKEFALKHKEIMENQFKNLGVWLDWENAYMPITKE 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + +      K   +KG + +     ++  R E    + EV       Y  + +   +  +
Sbjct: 154 YMEIGWWTLKVAHEKGLLTRDLRVVYWCPRCETALAEHEVRGEYKDVYDPSLYAKFKLAD 213

Query: 162 EEGYFF 167
           EE  + 
Sbjct: 214 EENTYL 219


>gi|261380603|ref|ZP_05985176.1| valine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796581|gb|EFC51928.1| valine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 943

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 136/415 (32%), Gaps = 75/415 (18%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDD-------------------------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDHEGNVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394
           G+   +D          +  N + N  +  +     KD       P AFT +D+ I+   
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKLWNATNFVLMNTEDKDCGQDEMQPLAFTFADQWIIGKL 680

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            +    + E  +      A   +   V     D Y +  K  +++   P    T     V
Sbjct: 681 QQAEAAVAEAFETYRFDLAAQTLYEFVWNEYCDWYIELAKV-QIQTGCPTTQRTTRRTLV 739

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
            V+  +  LL   +P +  +++ ++      +   S+     P     K     F
Sbjct: 740 RVLETILRLLHPIMPFITEELWQVVAPLANAKTADSIMLAAYPQADKEKIVQTAF 794



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGRKKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|238483187|ref|XP_002372832.1| valyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220700882|gb|EED57220.1| valyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 1050

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 113/358 (31%), Gaps = 50/358 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDD 223
           +      +       Y    E     +    +    ++  +    +   F      +  D
Sbjct: 507 WCLSRQLWWGHQAPAYFVKIEGEENDDSDGNLWVTGRTEEEARKKAEAKFPGKKFDLVRD 566

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+ +         +P  +   G DIL F    +      L+
Sbjct: 567 PD-VLDTWFSSGLWPFSTLGWPNKTH-DFENLYPTSVLETGWDILFFWVARMIMLGIKLT 624

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI----------------------- 317
             +P  ++V+ H  I   +G K+SKSLGNVIDPI+V+                       
Sbjct: 625 GQVPF-REVYCHSLIRDSEGRKMSKSLGNVIDPIDVMEGIQLQTLHDKLLLGNLAEKEVA 683

Query: 318 --------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                          E G DALR+ LV     G D  +D   +         N I     
Sbjct: 684 TATKYQKKAFPKGIPECGADALRFALVSYTTGGGDIAFDIQVI--HGYRRFCNKIYQATK 741

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +  D+         G  + S+  IL   +   +EI E ++ +  +     V    
Sbjct: 742 YVLGKLGDDFKPQPTVSKTGRESLSERWILHKFNSAAKEINEALEQREFNVVATTVYQYW 801

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D + +  K     +   D   +        +     L+   +P +  +++  L
Sbjct: 802 YAQLCDVFIENSKFLLAPEVPADVQESAKQTLYTALEGALTLIHPIMPFVTEELWQRL 859



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K R + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 120 KVRPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWQRMKGKTTLWLPGMDHAGISTQ 179

Query: 60  KAAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                         +  +   N ++    +  S+D      T + 
Sbjct: 180 SVVEKMLWKKEKKTRHDLGREVFTDRVWEWKHEYHANIKNALRRVGGSFDWSREAFTMDP 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 240 NLSAAVTETFVRLHEEGIIYRANRLVNWC 268


>gi|154483696|ref|ZP_02026144.1| hypothetical protein EUBVEN_01400 [Eubacterium ventriosum ATCC
           27560]
 gi|149735606|gb|EDM51492.1| hypothetical protein EUBVEN_01400 [Eubacterium ventriosum ATCC
           27560]
          Length = 804

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 73/199 (36%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G     
Sbjct: 27  TTKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKMLHGYHIIHPMGWDAFGLPAEN 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A        +    N  N +   +       +D  + TT+ + +   + ++ ++  KG 
Sbjct: 87  YAIKMKTHPAISTAANIANIKRQINEIASLYDWDMEVNTTDPKFYKWTQWIFVQMFKKGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +    +    ++EV  G            V     + +  +++AY D+LL+
Sbjct: 147 AYEKEMPINWCPSCKTGLANEEVVNG----CCERCGAEVTKKNLKQWMLKITAYADRLLA 202

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + + + I
Sbjct: 203 DLDKLDWPEKVKKMQADWI 221



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 123/361 (34%), Gaps = 59/361 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 413 YKLRDWVFSRQRYWGEPIPIVHCPDCGAVPVPEDQLPLLLPDVESYEPTGTGESPLAAID 472

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAKFW-PADLHVI 263
           +  +        P       M  W         Y+      +     KA  + P D+++ 
Sbjct: 473 EWVNTTCPCCGKPAKRETNTMPQWAGSSWYFLRYIDNKNDKELVSREKADKYLPVDMYIG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 533 GVEHAVLHLLYSRFYTKFLHDIGVVDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPDD 592

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D+LR + +       D  +D+ G+         +G+   ++R   + +   + 
Sbjct: 593 LVRDYGCDSLRLYEMFVGPPELDSEWDERGI---------DGVYRFITRFWKLAVDSIE- 642

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                 A  E  + ++ +  +++  I   +++  ++  ++  +      +++ +  K   
Sbjct: 643 ------ANVEPTKEMIKLRHQMVHTITRRLEDFSLNTVVSGFMEFN---NKFIELAK--- 690

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
            K+   D+         E I+    LL  F P +  ++++ L       EN  +   D+ 
Sbjct: 691 -KEGGIDK---------ETIQTFVTLLAPFAPHIGEELWERLGNTGSVFENNKWPEADEE 740

Query: 493 L 493
           L
Sbjct: 741 L 741


>gi|317139714|ref|XP_001817704.2| valyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 1050

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 113/358 (31%), Gaps = 50/358 (13%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDD 223
           +      +       Y    E     +    +    ++  +    +   F      +  D
Sbjct: 507 WCLSRQLWWGHQAPAYFVKIEGEENDDSDGNLWVTGRTEEEARKKAEAKFPGKKFDLVRD 566

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +T G+ +         +P  +   G DIL F    +      L+
Sbjct: 567 PD-VLDTWFSSGLWPFSTLGWPNKTH-DFENLYPTSVLETGWDILFFWVARMIMLGIKLT 624

Query: 282 ANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI----------------------- 317
             +P  ++V+ H  I   +G K+SKSLGNVIDPI+V+                       
Sbjct: 625 GQVPF-REVYCHSLIRDSEGRKMSKSLGNVIDPIDVMEGIQLQTLHDKLLLGNLAEKEVA 683

Query: 318 --------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                          E G DALR+ LV     G D  +D   +         N I     
Sbjct: 684 TATKYQKKAFPKGIPECGADALRFALVSYTTGGGDIAFDIQVI--HGYRRFCNKIYQATK 741

Query: 364 RSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +  +  D+         G  + S+  IL   +   +EI E ++ +  +     V    
Sbjct: 742 YVLGKLGDDFKPQPTVSKTGRESLSERWILHKFNSAAKEINEALEQREFNVVATTVYQYW 801

Query: 422 SE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                D + +  K     +   D   +        +     L+   +P +  +++  L
Sbjct: 802 YAQLCDVFIENSKFLLAPEVPADVQESAKQTLYTALEGALTLIHPIMPFVTEELWQRL 859



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K R + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 120 KVRPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWQRMKGKTTLWLPGMDHAGISTQ 179

Query: 60  KAAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                         +  +   N ++    +  S+D      T + 
Sbjct: 180 SVVEKMLWKKEKKTRHDLGREVFTDRVWEWKHEYHANIKNALRRVGGSFDWSREAFTMDP 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 240 NLSAAVTETFVRLHEEGIIYRANRLVNWC 268


>gi|261346442|ref|ZP_05974086.1| isoleucine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282565426|gb|EFB70961.1| isoleucine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 936

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 129/402 (32%), Gaps = 48/402 (11%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDE-AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGY 165
           K +          Y   +  +    +    + + G D      Q     + VQW+   G 
Sbjct: 389 KGLLMYKKAISHSYPCCWRHKTPVIFRATPQWFIGMDKNGLRKQSLKEIDIVQWIPGWGR 448

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               S  +++          +  P+     +  E +      L +    R   D GI+  
Sbjct: 449 ARIESMVENRPDWCISRQRTWGTPMSLFVHKDTEELHPRTLELMEEVAKRVEVD-GIQAW 507

Query: 222 DDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            D                    + VW D+ + +           G+      AD+++ G 
Sbjct: 508 WDLDAAELLGADAESYRKVPDTLDVWFDSGSTHFAVVDARPEFHGNS-----ADMYLEGS 562

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +  +    P  + +     +  +G K+SKSLGN + P EV+ ++G D
Sbjct: 563 DQHRGWFMSSLMLSTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQEVMNKLGAD 622

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP----- 378
            LR ++      G+    D+  + KR     A      +  +   +L + +G  P     
Sbjct: 623 ILRLWVASTDYTGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPETDMV 675

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
            P      D   +       +EI +          + +++   S      Y D  K  + 
Sbjct: 676 KPEDMVVLDRWAVGRALEAQKEITKAYDEYDFLGVIQRLMHFCSIEMGSFYLDIIKDRQY 735

Query: 437 -KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K++     +       ++  L   +   +   +++I+  L
Sbjct: 736 TAKSDGLARRSCQTALFHIVEALVRWIAPVLSFTSDEIWREL 777



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 60/206 (29%), Gaps = 16/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLAGFDSPYIPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQIVGKPGEKVSAAEFRAKCREYAKEQIEGQKADFIRLGVLGEWDKPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K    G + KG     +     +   + EV              P    +     
Sbjct: 166 IRALAKTIANGHLVKGAKPVHWCTACGSSLAEAEVEYYDKTSPSIYVRFPAVDSKAVCEK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +++ +   L    +   + LP  R
Sbjct: 226 FGVASDKVPSL-VIWTTTPWTLPANR 250


>gi|291542661|emb|CBL15771.1| Isoleucyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 921

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 74/475 (15%), Positives = 151/475 (31%), Gaps = 26/475 (5%)

Query: 37  FHRLDGL-DVLFTTGTDEHGQKIAKAAQNAGVTTKVF---VDQNSRNFRDMADVLDI--S 90
           ++      ++      D +G    +A Q AG+TT      +         +  +  I   
Sbjct: 343 YNVCQNYPEIPIICPVDSNGVLTEEAGQFAGLTTDEANKKIAAYLEENGSLFALKKIVHQ 402

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
           Y    R             +  + D  D      +    +     +  D +      +  
Sbjct: 403 YPHCWRCKTPILFRATDQWFCSVDDFKDEAVDAINTVKWIPA---WGKDRITSMVRERKD 459

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                  +W      FF     +  +          +   E  N   +   + +  L   
Sbjct: 460 WCISRQRKWGVPIPIFFCKDCGEALIDKDAMLAVADLFGKEGSNAWYNHTAAEI--LPAG 517

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            K    G    D  + IM VW D+ +++       DN +       PADL++ G D    
Sbjct: 518 TKCKKCGCTEFDKEKDIMDVWFDSGSSHAAVLEQRDNLES------PADLYLEGNDQYRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +       P    +     +  +  K+SKSLGN I P +VI++ G D LR +
Sbjct: 572 WFQSSLLTSVATRGRAPYKAVLTHGMILDDESRKMSKSLGNGISPQDVIKQYGADVLRLW 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESD 387
           +        D    KD LK+   ++    I N     +  I   + D  +         D
Sbjct: 632 VASTDYQT-DVHISKDILKQI--SESYRKIRNTARYILGNISDFNPDTDMVDFDKVLPID 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRA 444
           +  L+  + ++ ++R +  N   H     + +   V   + Y D  K     +K +    
Sbjct: 689 KWALAKLNDLITKVRTSYDNYEFHIVYHSIHNFCVVDMSNFYLDVLKDRLYTEKADSLSR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
                V   ++  +  ++   +   +++I+  +  +        +   +     +
Sbjct: 749 RAAQTVIYVILDAMTRMIAPLLAYTSDEIWKYMPHSSNENAEHVIFNEIPENIAI 803



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 16/164 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG      
Sbjct: 47  EGKPLFILHDGPPYANGDIHLGHALNKILKDFIVRYKNMAGFKAPYVPGWDTHGLPTELK 106

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
           A+                    + FV     + R     L +   +D    T        
Sbjct: 107 ARKKAGIGNSAEISVVELRKMCEEFVKGYINDQRTQFKRLGVIGEWDKPYITLNHEFEAE 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
              ++ +++ KG IYKG    ++    +    + E+    D  +
Sbjct: 167 QIRVFAEMATKGYIYKGLKPVYWCPECKTALAEAEIEYAEDPCH 210


>gi|238893007|ref|YP_002917741.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545323|dbj|BAH61674.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|238774010|dbj|BAH66507.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238774031|dbj|BAH66527.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae]
          Length = 938

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 500

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 669 FDPAKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR 96
            +             +     R+  A+ +D    DFIR
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAAEQIDGQRKDFIR 143


>gi|260581957|ref|ZP_05849753.1| isoleucyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095150|gb|EEW79042.1| isoleucyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 941

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 150/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L+ L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLELLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++      +E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKHDLVKPEEMISLDRWAVACALDAQKE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 ICTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|307718100|ref|YP_003873632.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531825|gb|ADN01359.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 809

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 3/202 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++ Y+     YP+A+  H+GH       D+  R+ R+ G  VL   G D  G      
Sbjct: 33  KEKRRYVLDMFPYPSAEGLHVGHPEGYTATDIYCRYLRMRGYQVLHPMGFDSFGLPAEIY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  ++N   FR     L  SY  D  I T    ++   + ++ K+ + G  
Sbjct: 93  AITTGTHPRITTERNIERFRTQIQSLGFSYDWDREIATHRPEYYKWTQWMFLKMYEMGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      W+         ++EV +  +G      ++PV       +  +++AY D+LL  
Sbjct: 153 YMAEVPVWFCEALGTVLANEEVIQTPEGPRSERGNHPVIRKPLRQWMLKITAYADRLLEG 212

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +           +   I   +
Sbjct: 213 LDKLDWPESIKTMQRNWIGRSE 234



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 132/378 (34%), Gaps = 52/378 (13%)

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +  K    K           +   N          Q Y  +  PV  +E +G     
Sbjct: 393 FSGLPTKEMKEKIIAYMEEKGIGKRAVNYRLRDWIFSRQRYWGEPIPVVHVEGDGVQPVP 452

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
                  L   ES      P       ++ ++  ++  +          +    PQ+   
Sbjct: 453 YDQLPVTLPEVES----YKPTGTGESPLATIRDWVETSAPDGSGRKAYRETNTMPQWAGS 508

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------L 280
            W      YL      +     K  +W P DL+V G +    H +Y   +         +
Sbjct: 509 CW--YYLRYLDPHNDREFASREKIDYWMPVDLYVGGAEHAVLHLLYARFWHKVLYDLGLV 566

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + + P  + V     +   GEK+SKS GNV++P ++IEE G D+LR + +          
Sbjct: 567 NTDEPFMRLVNQGMILGEDGEKMSKSRGNVVNPDDIIEEYGADSLRMYEMFMGPLEATKP 626

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +   GL          G+   ++R   +  ++     P P         +L +  + +++
Sbjct: 627 WSTKGLV---------GVHRFLNRVWDISEREITDEEPDPD--------LLKLLHKTIKK 669

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+ ++   + A+AQ+++ ++E+ +                    V     E      +
Sbjct: 670 VTEDTEHLRFNTAIAQMMTYINEIYK-----------------LERVPRSLWEPF---VL 709

Query: 461 LLQAFVPKLANKIFDILF 478
           ++  + P +A ++++ L 
Sbjct: 710 IIAPYAPHIAEEMWEKLG 727


>gi|270013434|gb|EFA09882.1| hypothetical protein TcasGA2_TC012030 [Tribolium castaneum]
          Length = 232

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  NV+ P +  E    D LRYFL+RE     DG Y    + + +N++LA+ +GNL+
Sbjct: 1   MSKSKNNVVCPFQRSEIYSSDGLRYFLLREGVAHSDGNYSDTKVIRILNSELADTLGNLL 60

Query: 363 SRSVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
           SR     L  +              A ++  + ++   + +      +  N   ++A+ +
Sbjct: 61  SRCCGTALNPHQTFPKIEASAFESVASSDVTKKLIEDVATLPDVCMGHYSNFNFYKAVDR 120

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           VI+ + + + +F+  KPWELKK +        VL++T+E +R   ILLQ  +P +A+ + 
Sbjct: 121 VIATLHQANLFFETFKPWELKKESAKTRELDVVLHLTLETLRVCGILLQPIIPNIASNLL 180

Query: 475 DILFVADENRCFQSLDQRLKPGFM-----LHKTFDPIFPRFL 511
           + + VA E R F                 L K    +F R +
Sbjct: 181 NKINVARERRTFSDAKILSWDDTNFVRKELAKDKTLLFKRIV 222


>gi|146304446|ref|YP_001191762.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145702696|gb|ABP95838.1| valyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 808

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 66/338 (19%), Positives = 139/338 (41%), Gaps = 23/338 (6%)

Query: 158 QWMEEEGYFFRLSAYQDK--LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           +W+    + + +S  +     L ++      ++P +  +  +   KS         K   
Sbjct: 402 EWINNIEWDWNISRQRLYGTPLPFWYCDNLHLVPADISSLPVDPTKSNPPV----EKCPH 457

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
            G+ +     ++  VW+D+    +             +K +PAD+ + G DI+R    Y 
Sbjct: 458 CGLPLKP-LTHVADVWVDSSVT-VLYLSGFYENKLRFSKTFPADVRLQGTDIIRTWLFYT 515

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
            +   +L+ N+P  + +     +   G ++SKS GN + P++ I+E G DA+R  L+ + 
Sbjct: 516 FFRTLMLAGNVPFKRVIVHGQVLGPDGTRMSKSKGNNVSPMDRIDEFGADAIRMTLL-DA 574

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSV 393
           + G D  +  D +K +        + N    +   I       +  P      D+ IL+ 
Sbjct: 575 SIGDDFPFKWDTVKGKKLLL--QKLWNASRLAYPFIH---GRKLEKPEVLHPIDQWILAK 629

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
               +++  +  +NQ     L+ +     E   D Y +  K       + DR++T  Y  
Sbjct: 630 HKEFVEKAIQAYENQDFFVILSMLYEYFWETIADEYLELIKHRLF---SDDRSAT--YTL 684

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +++ L ILL    P +  +I+ ++F   ++   ++L
Sbjct: 685 GRILKDLIILLHPIAPHITEEIYSLIFGEKQSVLLETL 722



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+   +I T   + + + H+GHAY + IAD +ARF +L G +VLF  G D  G      
Sbjct: 47  SEKPVFFIDTPPPFTSGELHMGHAYWVTIADAMARFKKLQGYNVLFPQGWDTQGLPTELK 106

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCR 107
            Q      K            + +      +     L    +++ F  RT    +    +
Sbjct: 107 VQYKLGIPKENRDLFLKKCVEWTEDMIGKMKSAMIRLGYRPNWEQFEYRTYHPNYRRVIQ 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++  KG I       ++  + E      EV  
Sbjct: 167 RSLIEMHQKGMIRMKQGPVYWCPKCETAVAQSEVGY 202


>gi|304384541|ref|ZP_07366887.1| leucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328735|gb|EFL95955.1| leucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 809

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ Q  H+GH       D+++R  R+ G  VL   G D  G    +
Sbjct: 32  EQKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQ 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F   N +NF+     L  SYD    + TT+  ++   + +++++  KG 
Sbjct: 92  YAMKTGNNPKDFTAHNIKNFKRQIQSLGFSYDWSREVNTTDPEYYKWTQWIFEQLYKKGL 151

Query: 119 IYKGCYSGWYSL--RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      ++          ++EV  G   +       PV     + +  +++AY D+L
Sbjct: 152 AYEKETLVNWAPDLMGGTVVANEEVVNGKTERGGF----PVYRKPMKQWILKITAYADRL 207

Query: 177 LSYYESHPEFILPIERRNEVI 197
           +   +         E +   I
Sbjct: 208 IDDLDLVDWPDSIKEMQKNWI 228



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 144/424 (33%), Gaps = 62/424 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            + R ++  R     I      G++ +  Y+G     +  + +     + + K  D    
Sbjct: 347 HDPRDYEFARKFKIDIVPVIGGGNLDEEAYTGDGPHINSGFLDGLNKQEAIDKMLDWLEE 406

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           +   +         + F    Y  + +                     LP     +    
Sbjct: 407 HGAGHKKVNYRLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPATDNIKPSGT 466

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D    K W
Sbjct: 467 GESPLANLEDWLNVVDENGRKGRRETNTMPQWAGSSWYFLRYVDPKNQNKIADEDLLKEW 526

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 527 LPVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSK 586

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++E  G D LR + +      +   + ++GL         NG    + R   
Sbjct: 587 GNVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSEEGL---------NGSRKWIERVWR 637

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ D + +          D  +  + ++ ++++ E+ +N   + A++Q++  V+E  + 
Sbjct: 638 LMIDDNNHLRDRITMIN--DHKLDLIYNQTVKKVTEDYENMRFNTAISQMMVFVNEAYK- 694

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
                           A  +  V +E    L  LL   VP +A +I+ I+   +E   ++
Sbjct: 695 ----------------ADALPMVYME---GLVKLLSPIVPHVAEEIWQIMG-HEETITYE 734

Query: 488 SLDQ 491
           +   
Sbjct: 735 AWPT 738


>gi|269792595|ref|YP_003317499.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100230|gb|ACZ19217.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 927

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 93/289 (32%), Gaps = 23/289 (7%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            + +S ++ L         G         IM VW D+  ++L            K   WP
Sbjct: 504 WWARSPMELLGDLCSCPHCGSSNLSKESDIMDVWFDSGVSHLAVLE------TRKELGWP 557

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F              P  + +     +  KG K+SKSLGNV+ P E
Sbjct: 558 ADMYLEGSDQHRGWFQTSLLTGIATRGKAPFQQVLTHGFIVDGKGRKMSKSLGNVVSPQE 617

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI++ G D LR ++        D       LK  V +         +  +   IL +   
Sbjct: 618 VIDKYGADILRLWVASTDY-RGDVRISDRILKNLVES------YRRIRNTARFILGNLSD 670

Query: 376 MIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P             D+  +S    +++++    +    H     V           Y 
Sbjct: 671 FDPAKHRIPRTEMLPFDKWAVSRLQDLIEKVTRGYEEYEFHVPYFAVHQFCDNDMSSLYL 730

Query: 429 DAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           D  K        +     +      E++  L  +L   +     +I+  
Sbjct: 731 DVCKDRLYADHQDGISRRSAQSAMWEILISLCKILSPILSFTCEEIWQF 779



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 15/169 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N   HIG A+  I+ D + +F  + G    +  G D HG  I      
Sbjct: 50  PTFILHDGPPYANGHIHIGTAFNKILKDFIPKFKSMRGFRAPYVPGWDTHGLPIELKVLK 109

Query: 65  ------AGVTTKVFVDQNSRN-------FRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                   V+      + ++         R+    L +   +DD   T +  +       
Sbjct: 110 EDKVDREQVSPLELRSRCAKYALGFVDVQREEFKRLGVLGDWDDPYLTLKPEYEAAQVEA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +  + ++G +YKG    ++    +      E+    +         P++
Sbjct: 170 FADMLERGLVYKGKKPVFWCTDCQTALAAAEIEYEDESSPSIYVAYPME 218


>gi|314940361|ref|ZP_07847523.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313640401|gb|EFS04981.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 804

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+   +  +  + +     +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVEKAAYTEDGTHINSEFLDGMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWAILG 721


>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 918

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 77/474 (16%), Positives = 158/474 (33%), Gaps = 33/474 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD--- 104
               DE G    +A   +G+         +   +++  +L +S+       + R      
Sbjct: 345 LCPVDERGYMTEEAPGFSGMFYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTI 404

Query: 105 ---TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
              T +        +  + K      +          + +    D      +        
Sbjct: 405 FRATAQWFASIDKIREQLLKAVEETKWVPAWGEIRIHNMIRDRGDWCISRQRA-----WG 459

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                F     +  +      H   +      N         L     +      G    
Sbjct: 460 VPIPVFYAENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPGSPNG--RF 517

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
                IM VW D+ +++                  PADL++ G D     F++    A  
Sbjct: 518 TKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWFNSSLSTAVA 571

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG 339
           ++   P    +     +  +G K+SKSLGNV+ P +V+E++G D LR ++        D 
Sbjct: 572 VTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASVDYQA-DV 630

Query: 340 FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRV 397
               + LK+   A++   I N   R +   L D++    T       E D  +L   +R+
Sbjct: 631 RISDNILKQV--AEVYRKIRNTF-RFMLGNLFDFNPAEHTVAIEQLREVDRYMLIKLNRL 687

Query: 398 LQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
           ++++++  +         +V +   V     YFD  K    ++  N     ++  V  E 
Sbjct: 688 IEKVKQAYETYEFATIYHEVNNFCTVDLSAFYFDFSKDVLYIEAANNHERRSIQTVLYET 747

Query: 455 IRQLAILLQAFVPKLANKIFDILF-VADENRCFQSLDQR--LKPGFMLHKTFDP 505
           +  L  L+   +P  A++++  +  V +E+     + +   +     + K +D 
Sbjct: 748 LVALTKLVAPILPHTADEVWSYIPHVKEESVQLVDMPEAVHIDDAGRIVKKWDA 801



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A
Sbjct: 45  KDRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     R+    L +   +D+   T    +    
Sbjct: 105 LTKNKGVNRKEMSVAEFRKLCEQYAYEQIDRQREQFKRLGVRGDWDNPYITLTPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 IKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 215


>gi|73972296|ref|XP_860172.1| PREDICTED: similar to Valyl-tRNA synthetase 2 (Valine--tRNA ligase 2)
            (ValRS 2) (G7a protein) isoform 4 [Canis familiaris]
          Length = 1244

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 127/435 (29%), Gaps = 94/435 (21%)

Query: 150  YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             N   + V+ +    ++ R         +        ILP              ++D  +
Sbjct: 663  CNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEA-HQRTWHTWMDNIRDWCI 721

Query: 210  SRKTFDWG--IKIPDDPQY----------------------------------IMYVWID 233
            SR+   WG  I    DP                                    ++  W  
Sbjct: 722  SRQ-LWWGHRIPAYFDPDERYWVSGRSKAEAREKAAKEFGVSSDKISLQQDEDVLDTWFS 780

Query: 234  ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
            +     +  G+ +  +   + F+P  L   G DIL F    +      L+  LP  +   
Sbjct: 781  SGLFPFSIFGWPNQSE-DLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYL 839

Query: 292  SHGFILHKGEKISKSLGNVIDPIEVIE--------------------------------- 318
                    G K+SKSLGNVIDP++VI                                  
Sbjct: 840  HAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKDGQKADFP 899

Query: 319  ----EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
                E G DALR+ L    + G+D   D + +         N + N    ++  + K + 
Sbjct: 900  AGIPECGTDALRFGLCAYTSQGRDINLDVNRILG--YRHFCNKLWNATKFALRGLGKGFV 957

Query: 375  GMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
                +   G  +  D  I S  +  ++   +  Q            S       D Y + 
Sbjct: 958  PSATSEPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLEC 1017

Query: 431  QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             KP  L   +   A          +     LL  F+P +  ++F  L      R  Q+  
Sbjct: 1018 LKP-VLNGMDHVVAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLP----RRTLQA-- 1070

Query: 491  QRLKPGFMLHKTFDP 505
                P   +    +P
Sbjct: 1071 ---PPSLCVTPYPEP 1082



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
              +                  + ++           L  S D + R   T + +     
Sbjct: 397 WREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 455

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 TEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|301169687|emb|CBW29288.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 924

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 335 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 394

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 395 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 454

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 455 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 514

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 515 LDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 569

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 570 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 627

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 628 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 682

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 683 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 742

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 743 LVRWMAPILSFTADEIWQHLPQTESARA 770



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 89

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 90  VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 150 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 209

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 210 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 255


>gi|288553838|ref|YP_003425773.1| leucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544998|gb|ADC48881.1| leucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 807

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      +P+    H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 29  DKPKFYALDMFPFPSGAGLHVGHPEGYTATDILSRMKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR     L  SY  D  + T +  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTLKNIDTFRRQIKSLGFSYDWDREVNTIDPDYYKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +         ++EV  G          +PV+    + +  +++AY D+LL  
Sbjct: 149 YIDEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVERRPMKQWMLKITAYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDELDWSESIKDMQRNWIGRSE 226



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 55/415 (13%), Positives = 130/415 (31%), Gaps = 60/415 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +       ++   GD+ K  Y+G     +  + N    +  +    +    
Sbjct: 342 HDERDYEFAKTFDLEIIEVVAGGDVLKEAYTGDGEHVNSDFLNGLDKESAITNMIEWLEA 401

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N             + F    Y  + +         + P+      ++  K      S +
Sbjct: 402 NHYGTKKVTYRLRDWLFSRQRYWGEPIPMIHWEDGSMTPVAYEELPLTLPKMDEIKPSDT 461

Query: 211 RKTFDWGIKIP---DDPQYIMYVWIDALTNYLTTTGYLDNPDG------------SKAKF 255
            ++     K      DP+  M    +  T                           K K 
Sbjct: 462 GESPLANHKEWLEVTDPKTGMKGRRETNTMPNWAGSCWYYLRYIDPNNSEALADPEKLKQ 521

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 522 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKS 581

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +++   G D LR + +          +  +GL         +G    + R  
Sbjct: 582 KGNVVNPDDIVLSHGADTLRLYEMFMGPLDASIAWSTNGL---------DGARRFLDRVW 632

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            + + +    +      T+  +  +    + ++++ E+      +  ++Q++  +++  +
Sbjct: 633 RLFIDEKTNELNPAITDTKGTDEFIRTYHQTVKKVTEDFAALRFNVGISQMMVFINDAYK 692

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               + P EL +                      LL    P +A +++      +
Sbjct: 693 --QEKLPRELMEG------------------FVKLLAPLAPHIAEELWQKFGHNE 727


>gi|157368943|ref|YP_001476932.1| isoleucyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980058|sp|A8G9L4|SYI_SERP5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157320707|gb|ABV39804.1| isoleucyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 938

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 119/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ E G     +   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPEWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKDTEQLHPRSVELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +        +G      
Sbjct: 501 E-QDGIQAWWDLDAADILGADAADYVKVPDTLDVWFDSGSTHSSVVDVRPEFNGHG---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYKEVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       Q+I +   N   H  + +++   S      Y
Sbjct: 668 GFEPSTDCVAPEEMVVLDRWAVGRALAAQQDIEKAYANYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K++     +       +   L   +   +   A++I+  L
Sbjct: 728 LDIIKDRQYTAKSDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWAFL 778



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGMSGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLYGKPGEKLTAAEFRIKCREYAAEQVEGQKKDFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G + KG     +     +   + EV                         
Sbjct: 166 IRALGKIISNGHLLKGAKPVHWCTDCRSSLAEAEVEYYDKTSPSIDVAFHAVDAAAVATK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F ++ +   +     +   + LP  R
Sbjct: 226 FGVTRFNGPVSLVIWTTTPWTLPANR 251


>gi|329940934|ref|ZP_08290214.1| isoleucyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300228|gb|EGG44126.1| isoleucyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 1047

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 121/389 (31%), Gaps = 17/389 (4%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +    +   G+Y +   N + W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLEENEKTNWYPERIKHGRYGDWLTNNIDWAL 454

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    E H   +       E+    +SGL           +     
Sbjct: 455 SRNRYWGTP---LPVWRCTEDHLTVVGSRAELTELTGTDQSGLDPHRPFIDEVTFVCPEE 511

Query: 222 DDPQY------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      ++  W D+ +      GY           +PA       D     F+ +
Sbjct: 512 GCEAQATRVPEVIDAWYDSGSMPFAQWGYPYKNKELFESRYPAQFISEAIDQTRGWFYTL 571

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                L+         V     +   G K+SK LGN++ PI ++E+ G DA+R+F+    
Sbjct: 572 MAIGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMEQHGADAVRWFMAAGG 631

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESIL 391
           +           L++ V   L      +  +++      +      P P      D  +L
Sbjct: 632 SPWAARRVGHGNLQEVVRKTLLTYWNTVAFQALYARTSGWAPSGADPAPAERPLLDRWLL 691

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           S    +  ++  +++     RA   + + V ++  ++  +      + +     T     
Sbjct: 692 SELHALTDQVTRSLEGYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----L 747

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480
            EV+  +  L+    P L  +++  L V 
Sbjct: 748 HEVVETVTKLMAPLTPFLTERVWQDLVVP 776



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  P   H    +  DV  RF  + G  V    G D HG  +  A +         
Sbjct: 51  PPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELAVEKELGFTGKK 110

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +++  F ++   +   +  DD  RT +  + D+     K+I
Sbjct: 111 DIEAYGIAEFNAKCRESVTRHTDAFTELTTRMGYWVDLDDAYRTMDPEYVDSVWWSLKEI 170

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            DKG + +      +  R     +D E+ +G +
Sbjct: 171 FDKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|299136787|ref|ZP_07029970.1| isoleucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601302|gb|EFI57457.1| isoleucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 959

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 131/375 (34%), Gaps = 23/375 (6%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + ++ +      +          W      F     ++    +   +    +   E  + 
Sbjct: 462 WGEERISNMIATRPDWCISRQRIWGVPIAVFLCEKCHEPLNDAKINASIVKLFQSEGADA 521

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             S     L     S K+    +        I+ VW ++  +      +    D      
Sbjct: 522 WYSHSAEQLLPAGTSCKSCG-AVMQFRKEMDILDVWFESGAS------WHAVLDVEPELH 574

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           WPADL+  G D     FH+    +  +  + P      S   +  +G   SKSLGN +DP
Sbjct: 575 WPADLYTEGGDQHRGWFHSSLLSSVGIRDSAPYKYVATSGWTLDEQGRAFSKSLGNGVDP 634

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           ++V   +G + +R ++   +   +D     +GL +RV ++    + N + R +   L D+
Sbjct: 635 VDVANRLGGEIIRLWVA-SVDFREDVAAS-EGLMQRV-SENYRKLRNTL-RFLLSNLFDF 690

Query: 374 DGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFD 429
           D         A    D+ IL+  + +  +IR +  +   HRA   +   ++ ++   Y D
Sbjct: 691 DPAKNAVEWAALQPLDQYILARTAELDAKIRNSYDHFEFHRAYQALNEFINTDLSAMYLD 750

Query: 430 AQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
             K        N     +       +   L  L+   +   A +++  L   ++      
Sbjct: 751 VIKDRLYTFAPNSQARRSAQTSLWRIAEALTRLIAPILSFTAEEVWQYLPKMEDRVSSVH 810

Query: 489 L-----DQRLKPGFM 498
           L      Q + PG +
Sbjct: 811 LALFPAMQEIVPGTV 825



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 15/156 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  +     Y N   H+GHA    I D + +   + G D  +  G D HG  I      
Sbjct: 55  PKYILHDGPPYANGAIHLGHALNKCIKDFVVKTKTMAGFDAPYVPGWDCHGLPIEIKVDE 114

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                             + +  +     R     L +   +     T +  +  +    
Sbjct: 115 KLGGKKLEMDPVAVRKACREYAAKFIDLQRSQFKRLGVFGRWAKPYATMDFPYEASILET 174

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           +    +KG +YKG    ++   D     + EV    
Sbjct: 175 FYGFYEKGYVYKGLKPVYWCSHDHTALAEAEVEYEM 210


>gi|297526077|ref|YP_003668101.1| aminoacyl-tRNA synthetase class Ia [Staphylothermus hellenicus DSM
           12710]
 gi|297254993|gb|ADI31202.1| aminoacyl-tRNA synthetase class Ia [Staphylothermus hellenicus DSM
           12710]
          Length = 828

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 87/483 (18%), Positives = 156/483 (32%), Gaps = 48/483 (9%)

Query: 35  ARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN-----SRNFRDMADVLDI 89
            R+  L+GL  +      E              T  V V         + FRD+     I
Sbjct: 258 NRYKHLNGLHAINPLYGHEMIITTYPEVDPKFGTGLVMVCSYGDQTDVKMFRDLGLKPTI 317

Query: 90  SYDDFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
             D   R T +       +  +  R   + + +KG + K                  ++ 
Sbjct: 318 IIDKDGRLTPETGPLSGLKVEEARRKAAEILEEKGLLVKKEKIKHSVPVCWRCKTPIQII 377

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-----------LPIE 191
              +                E   F+   ++ KLL + +S                +P+ 
Sbjct: 378 HTKEWFLKQLDFKDEIRKIAEKIEFKPEIHRKKLLDWIDSVSTDWPISRDRYYGTEVPVW 437

Query: 192 RRNEV--ISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLTTT 242
           R  +   +   + G        +       +   P+        +   W D+  + L  T
Sbjct: 438 RCKKCGSVLLPEPGKYYRPWRDEPPWDKCPVCGAPKEYLEGEKKVFDTWFDSSISVLYVT 497

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKG 300
           GY  N      K +   L   G+DI+R    Y     + L+          +   +  KG
Sbjct: 498 GYKRNDK-LFRKAFKYTLRPQGQDIIRTWLYYSLLRVYQLTGKPAFKWVRITGMGLDEKG 556

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           E + KS GNVIDP   IE+ G DA RY+       G D  + +  +  R     A  + N
Sbjct: 557 EAMHKSKGNVIDPEPYIEKYGADAFRYWAAASAKLGYDYRFSEQVI--RTGFLFATKLWN 614

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           +  R +SM  K          A    DE+ ++  + +L+EI E   N  +   + ++   
Sbjct: 615 IA-RFISMFPK-----PEKKPALRPLDEATIAYFNNILREIDEAYSNLDVFEPITKIYQF 668

Query: 421 VS--EVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           V       Y +  K     + N    +      Y    ++ +    L   +P + + ++ 
Sbjct: 669 VWNYFASHYIELVKSRAYNRENKYSREEQEAAWYTLHYILNRTLRALAPIMPFVTDALYT 728

Query: 476 ILF 478
            L+
Sbjct: 729 RLY 731



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 20/179 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           RE + I T   Y + + H+G A      D++AR+ R+ G +VL     D +G  +     
Sbjct: 56  REIIAIDTPPPYASGKWHVGGAAHYAQIDMIARYFRMKGYNVLVPFYADRNGLPVEVQVE 115

Query: 62  ------AQNAGVTTK----------VFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHD 104
                       T +           F+D+  ++   +  +L  S+D +   T  + +  
Sbjct: 116 KTYGINPHETAKTPEGREEFLRLCRKFLDKAEKDIVKIWRMLGCSFDYWRNGTDSEEYRK 175

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQWMEE 162
             +  + ++  KG IY+      +  R +    D E+     +G  Y  +    +  EE
Sbjct: 176 ITQATFIELYKKGLIYEAERPVNWCPRCKTTLADAELEHKEVEGYLYYIKFKVKETGEE 234


>gi|228473112|ref|ZP_04057869.1| valine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275694|gb|EEK14471.1| valine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 879

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 124/364 (34%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++       L       E  L  +R +         ++D ++SR+   W
Sbjct: 353 VEQRPLDQWFLKMEELVKPALKAVLESEEIKLYPKRFDNTYRHWLENVRDWNISRQ-LWW 411

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 412 GQQIPAYYYGTGKEDYVVAETKEKALALAKEKNHNPNLTLEDLRQDEDALDTWFSSWLWP 471

Query: 239 LTTTGYL-DNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    + D  +     ++P    V G DIL F    +    +  +   P      +   
Sbjct: 472 MSVFNGVLDPDNKEFKYYYPTQDLVTGPDILFFWVARMIIAGYEFAGEKPFTNVYLTGLV 531

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKSLGN  D +++I++ G D +R  L+   + G D  +D+   ++   +  A
Sbjct: 532 RDKLRRKMSKSLGNSPDALKLIKDFGADGVRVGLLLSSSAGNDLLFDEALCQQ--GSAFA 589

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N    +  +I       IP P    +S     +   ++L E  ++     I  AL 
Sbjct: 590 NKIWN----AFRLIKGWQVADIPQPDYAKQSILWFKNKFQKILSETEDDFSKYRISDALM 645

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++  LV +       +  KP      + +         + +  +   LL  F+P +  +I
Sbjct: 646 KIYKLVWDDFCSWLLEMIKPAFGSPIDKE----TYREVISLFEENLKLLHPFMPFVTEEI 701

Query: 474 FDIL 477
           +  +
Sbjct: 702 WQQI 705



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 53/178 (29%), Gaps = 18/178 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ER    I           H+GH     I DVL R  RL GL+  +  GTD          
Sbjct: 35  ERTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLMGLNACWVPGTDHASIATEAKV 94

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                           +        +  Q      +    L  S D      T +   + 
Sbjct: 95  VAKLKEQGIQKSDLSREEFLKHAWEWTHQYGGVILEQLKKLGCSCDWNRTKFTMDDELYQ 154

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           +   ++  + +KG IY+G     +    +   +D+EV               V+  EE
Sbjct: 155 SVIKVFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIYKEQNGKLFYLIYKVEDSEE 212


>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044256|sp|A4J2F4|SYI_DESRM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 931

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 132/364 (36%), Gaps = 18/364 (4%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +D +Y   +G+          W      F+     ++ +     SH E +      + 
Sbjct: 436 WGEDRIYNMVEGRGDWCVSRQRTWGVPIPIFYCNDCGKEIITEETISHIEKLFREHGSDI 495

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             +   + L   SL+      G K        M VW D+ +++L      +       + 
Sbjct: 496 WFAKEANELVPASLTCPHCGKG-KDFRKETDTMDVWFDSGSSHLAVLNQPELWP---EQQ 551

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            PADL++ G D     F++    +  ++   P    +     +  KG K+SKSLGNV+DP
Sbjct: 552 RPADLYLEGSDQHRGWFNSSLSTSVAVTGKPPYKTVLTHGFTVDEKGRKMSKSLGNVVDP 611

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
           +++  ++G D LR ++        D    ++ LK+   +     I N   R +   L D+
Sbjct: 612 LKICSQMGADILRLWV-SSADYRADLALSQNILKQMTES--YRKIRNTA-RFLLGNLYDF 667

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFD 429
           D +          E D   L    ++++++    +N   H     V    +V     Y D
Sbjct: 668 DPVKDKVAYDKLPELDRVALMELHKLIKQVLAAYENYEFHIVYHAVHNYCVVDLSAFYLD 727

Query: 430 AQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-VADENRCF 486
             K   L    P          V  E +  L  LL   +     +I+  +  V D     
Sbjct: 728 IIKD-RLYTAVPGSLERRAAQTVLYEALDALVRLLTPVLAFTTEEIYKYMPVVGDRLASV 786

Query: 487 QSLD 490
           Q LD
Sbjct: 787 QMLD 790



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 19/173 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K  +     Y N   H+GH    ++ D++ ++  + G D  +  G D HG  I + 
Sbjct: 45  KGKTKFILHDGPPYANGHIHLGHTLNKVLKDIIVKYRSMSGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  AQN------AGVTTKV-----------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           A          V               + +  S  F+ +    D     +  T   ++  
Sbjct: 105 AIKQLGINRHQVNPVEFRAKCKDYALKWANTQSEEFQRLGVRGDWENPYY--TLLPQYEA 162

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ +++ KG IYKG    ++    E    + EV              PV
Sbjct: 163 TQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEYADKTSPSIYVKFPV 215


>gi|303233928|ref|ZP_07320577.1| leucine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494853|gb|EFL54610.1| leucine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 802

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++ Y      YP+ Q  H+GH       D+++R  R+ G +VL+  G D  G     
Sbjct: 29  KSKKRFYALVEFPYPSGQGLHVGHPRPYTALDIVSRKRRMQGYNVLYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +  +V  + N +NF+     +  S+  D  I TT+  ++   + ++ ++  KG 
Sbjct: 89  FAIKNKIRPEVVTENNIKNFKRQMQSIGFSFDWDREINTTDPDYYKWTQWIFIQMFKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G            V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPINWCPSCKTGLANEEVINGH----CERCGGQVVRKVKNQWMLKITEYADRLID 204

Query: 179 YY 180
             
Sbjct: 205 DL 206



 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 130/376 (34%), Gaps = 63/376 (16%)

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
            +Y+         +   Y   D V+       Y  +  P+ + E  G+          +L
Sbjct: 398 KMYEYIEEKEIGHKKTNYKLRDWVFSRQ---RYWGEPIPLVYCEHCGWVPLDEKDLPLVL 454

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
              +++          +++  FV +        R                M  W  +   
Sbjct: 455 PKVDNYEPTDNGESPLSKIDDFVHTK--CPKCGRDAVR--------ETDTMPQWAGSSWY 504

Query: 238 YLTTTGYLDNP----DGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLP 285
           YL  T   ++       +   + P D +  G +    H +Y   +         +    P
Sbjct: 505 YLRYTDPHNDEAIASKENLDYYTPVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVPTKEP 564

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             K+      +    EK+SKS GNV++P +++ + G D LR + +      K   + ++G
Sbjct: 565 YMKRTSHGMILGDNNEKMSKSRGNVVNPDDIVRDFGADTLRCYEMFIGDFEKSAPWSENG 624

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM 405
           +K            + V R+  ++  D +             E + ++  + ++++ E+ 
Sbjct: 625 VKG------CRKFLDKVWRTQELVDGDSNF------------EKMETLIHQTIKKVSEDY 666

Query: 406 QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           +N   + A+AQ+++L++E +          L K + ++            +   ILL   
Sbjct: 667 ENLKFNTAIAQLMTLLNEFNN---------LDKISKEQ-----------FKIFLILLNPV 706

Query: 466 VPKLANKIFDILFVAD 481
            P +  +I+  +    
Sbjct: 707 CPHITEEIWQRMGYEG 722


>gi|290983287|ref|XP_002674360.1| Valyl-tRNA synthetase [Naegleria gruberi]
 gi|284087950|gb|EFC41616.1| Valyl-tRNA synthetase [Naegleria gruberi]
          Length = 1007

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 102/303 (33%), Gaps = 46/303 (15%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA--IYWPA 277
           I    + ++  W  +     +  G+ +       +F+P  +   G DIL F    +   +
Sbjct: 518 ILQQDEDVLDTWFSSGLFPFSPLGWPNTESADFKRFFPTQMLETGLDILFFWVSKMVMMS 577

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL------------ 325
             L+  LP  + +        +  K+SKSLGNVIDPI+VIE + +  +            
Sbjct: 578 LSLTGELPFTEVLLHAMVRDKENRKMSKSLGNVIDPIDVIEGITLQEMNDKLKQGNLSSR 637

Query: 326 -------------------------RYFLVREIACGKDGFYDKDGL--KKRVNADLANGI 358
                                    R+ L+   A G+D   D   +   +     +    
Sbjct: 638 EIEKAALGQKKQFPEGIPECGTDALRFTLLNYTAQGRDIALDILRVFGYRTFCNKMWQTT 697

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ--NQLIHRALAQ 416
              +        +  +         T +D+ ILS  ++ ++    + +  N         
Sbjct: 698 KFALMNWTDFKSEGIENYPTDLSNLTFNDKWILSRLNKTIKACNASFEKGNYDFMTYTQS 757

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                     D+Y +  K  ++K  + +R  T   V    I Q   LL   +P +  +++
Sbjct: 758 CYDFWLKDLCDQYLEMIK-NDIKSEDLNRRRTTQLVLYTCIEQCLRLLHPTMPFITEELW 816

Query: 475 DIL 477
             L
Sbjct: 817 QRL 819



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 20/149 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I+          HIGHA  + + D + R+HR++G +VL+  G D  G      
Sbjct: 64  TTKETFTIALPPPNVTGSLHIGHALTVAVQDAICRYHRMNGKNVLYIPGVDHAGIATQVV 123

Query: 62  AQN---AGVTT---------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
            +                          + ++  +   +    +  S D      T ++ 
Sbjct: 124 VEKQLAKQDPPVSRHEIGREKFVEKVFEWKEEYGQKIMNQLKRIGASLDWTRECFTMDET 183

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSL 130
                +  + K+ ++G IY+      +S 
Sbjct: 184 LSVAVKEAFIKMYEQGIIYRKNRLVNWSC 212


>gi|257900327|ref|ZP_05679980.1| leucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257838239|gb|EEV63313.1| leucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 804

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 66/412 (16%), Positives = 137/412 (33%), Gaps = 62/412 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R  +  +    +I      GD+ K  Y+      +  + +D    +  D      + 
Sbjct: 341 HDERDFEFAQTFGLEILPVIEGGDVQKAAYTEDGIHINSEFLDDMNKQEAIDKMNEWLEE 400

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +         +  +      +   K+     S +
Sbjct: 401 NGVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTVTAVPEEELPLRLPKTKNIKPSGT 460

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I+   +                M  W  +   YL      +     D  K K 
Sbjct: 461 GESPLANIEEWVNVVDPVTGKKGRRETNTMPQWAGSSWYYLRYIDPHNKKELADYEKLKR 520

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 521 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 580

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+E  G D LR + +          + ++GL+              + R  
Sbjct: 581 RGNVVNPDDVVETYGADTLRMYEMFMGPLDASIAWSENGLEGS---------RKFLDRVW 631

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ + + M          D  +  V  + ++++ E+ +N   + A++Q++  ++E  +
Sbjct: 632 RLIVDENNKMRDRITTLN--DGKLDKVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYK 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                               V  +  E I     LL    P +  +++ IL 
Sbjct: 690 --------------------VDALPYEYIEGFVQLLAPIAPHMGEELWAILG 721


>gi|152968602|ref|YP_001333711.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150953451|gb|ABR75481.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 922

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 425 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 484

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 485 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 539

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 540 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 599

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 600 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 652

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 653 FDPVKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 712

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 713 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGEREKYVF 771



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 30  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR 96
            +             +     R+  A+ +D    DFIR
Sbjct: 90  VEQEYGKPGEKFTAAEFRAKCREYAAEQIDGQRKDFIR 127


>gi|330009358|ref|ZP_08306515.1| isoleucine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328534821|gb|EGF61367.1| isoleucine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 950

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 453 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 512

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 513 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 567

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 568 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 627

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 628 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 680

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 681 FDPAKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 740

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 741 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGEREKYVF 799



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR 96
            +             +     R+  A+ +D    DFIR
Sbjct: 118 VEQEYGKPGEKFTAAEFRAKCREYAAEQIDGQRKDFIR 155


>gi|261403615|ref|YP_003247839.1| isoleucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370608|gb|ACX73357.1| isoleucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 1039

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 137/390 (35%), Gaps = 33/390 (8%)

Query: 102 HHDTCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
              T +   +    K +I +     +      +  Y N  +     +         P+  
Sbjct: 415 FRATEQWFLEISKIKENIIEHAKTVNWIPHWVETRYINGVKFVGDWNISRQRYWGIPLPV 474

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              E               Y        L  +  N+      + L   ++ +        
Sbjct: 475 WVCEKCG-----------KYIVVGSVKELEEKMINKDEVGEINDLHKPTVDKIKLRCECG 523

Query: 220 IPDDP-QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                   ++ VW D+      + G  +           AD    G D +   F++ +  
Sbjct: 524 GEMKRVGDVLDVWFDSGLAPYASIGIKELKK--------ADFITEGNDQVTKWFYSQHAL 575

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + ++  ++P  K +     +  KG+K+SKSLGN+++P +V+E+ G D LR++L+      
Sbjct: 576 SEIVFGDVPYKKCLMHGFTLDEKGDKMSKSLGNIVNPDDVVEKYGADLLRFYLLSANKVW 635

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCS 395
           +D  +    +   ++  L N + N    +V  M+L D+           + D+ ILS  +
Sbjct: 636 EDLRFVWSEMDDVLS--LFNTLWNAYMFAVNYMVLDDFKPDEKYFKYLKDEDKWILSRIN 693

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYVT 451
            V +   EN++    H     +   +       Y      + W+ +K + D+ +      
Sbjct: 694 SVAKIAVENLEVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWK-EKEDVDKLAA-YQTL 751

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             V+ +LA +L    P  A  ++  L   D
Sbjct: 752 YYVLLKLATILAPVSPHTAEAMYQNLKTED 781



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 20/186 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  ++ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I   
Sbjct: 34  EGNKEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVK 93

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +N                       K F  ++     +    L +   +++      K 
Sbjct: 94  VENEFGIKNKKEIETKIGVDKFIEKCKEFALKHKEIMENQFKNLGVWLDWENAYMPITKE 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + +      KK  + G + K     ++  R E    + EV       Y  + +   +  +
Sbjct: 154 YMEIGWWSLKKAHENGLLTKDLRVVYWCPRCETALAEHEVRGEYKEVYDPSVYVKFKLAD 213

Query: 162 EEGYFF 167
           EE  + 
Sbjct: 214 EENTYV 219


>gi|289192671|ref|YP_003458612.1| isoleucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939121|gb|ADC69876.1| isoleucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 1039

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 138/391 (35%), Gaps = 35/391 (8%)

Query: 102 HHDTCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
              T +   +    K +I +            +  Y N  +     +         P+  
Sbjct: 414 FRATEQWFLEISKIKDNIIEHAKTVQWIPHWVETRYINGVKFVGDWNISRQRYWGIPLPV 473

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW--G 217
              E               Y        L     N+      + L   ++ +       G
Sbjct: 474 WVCEKCG-----------KYIVVGSVEELEERMINKDEVGEINDLHKPTVDKIKLRCECG 522

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            ++   P  ++ VW D+      + G  +           AD    G D +   F++ + 
Sbjct: 523 GEMKRVPD-VLDVWFDSGLAPYASIGVKELKK--------ADFITEGHDQVTKWFYSQHA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            + ++  ++P  K +     +   G+K+SKSLGN+++P +V+E+ G D LR++L+     
Sbjct: 574 LSAIVFNDIPYKKCLMHGFTLDEHGDKMSKSLGNIVNPDDVVEKYGADLLRFYLLSANKV 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVC 394
            +D  +    +   ++  L N + N    +V  M+L ++           + D+ I+S  
Sbjct: 634 WEDLRFVWSEMDDVLS--LFNTLWNAYMFAVNYMVLDNFKPDEKYFEHLKDEDKWIISRV 691

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWELKKTNPDRASTVLYV 450
           + V +   EN++    H     +   +       Y      + W+ +K + D+ +     
Sbjct: 692 NTVAKIAIENLEVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWK-EKEDVDKLAA-YQT 749

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              V+ +LA +L    P  A  I+  L   D
Sbjct: 750 LYYVLLKLATILAPVAPHTAEAIYQNLKTDD 780



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 55/168 (32%), Gaps = 20/168 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  E+ Y      Y +   H+G A+  II D   RF R+ G +VL   G D HG  I   
Sbjct: 34  EGNEEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLDKAGWDMHGLPIEVK 93

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +N                       K F  ++          L +   +++      K 
Sbjct: 94  VENEFGIKNKKEIETKIGVEQFIEKCKEFALKHKEIMESQFKNLGVWLDWENAYMPITKE 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           + +      K   +KG + K     ++  R E    + EV       Y
Sbjct: 154 YMEIGWWTLKVAHEKGLLTKDLRVVYWCPRCETALAEHEVRGEYKDVY 201


>gi|290955750|ref|YP_003486932.1| hypothetical protein SCAB_11941 [Streptomyces scabiei 87.22]
 gi|260645276|emb|CBG68362.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 512

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 92/508 (18%), Positives = 162/508 (31%), Gaps = 67/508 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++ + +     N   H+GH A   + ADV  R+ R  G D +F TG  +    +   A+
Sbjct: 3   KRVAVISPAPTANGDLHLGHLAGPFLAADVFTRYQRAVGRDTVFGTGAQDTSTFVVTTAR 62

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
             G T +  V  ++         + I+ D F R  E+R          ++ D+G +    
Sbjct: 63  RLGTTPEALVADSTARIESTLAAMGIAVDGFTR-DEERFTKQVLRFVSRLHDEGKLVLRP 121

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQ-------YYNAQHNP------------------VQ 158
               Y+     Y  D  V  G              +  +P                  ++
Sbjct: 122 TLFPYAPSTGQYLVDGFVKGGCPNCLAEGCAGLCESCGHPLAAADLIDARSAENPEEVLE 181

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W E       L  Y+   L  Y +     L       V   +   L D  L+     WGI
Sbjct: 182 WHEIPVLVLPLEEYRG-RLREYFATTGAALRPHMAQAVEEMLSRPLPDFPLTYP-ISWGI 239

Query: 219 KIPD--------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD----LHVIGKD 266
             P         +P      W    T  L+     +        +WP      ++ +G D
Sbjct: 240 PAPFPEVAGQSVNPNAETMAWSIY-TTGLSAEARGEVLVEDDQLWWPESDTEVVYFLGFD 298

Query: 267 ILRFHAIYWPAF--LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                AI   A    L     LP    ++ F   + +K S S G+++   E+ + +  D 
Sbjct: 299 NTFPFAIAGAAMLLALHDRYALPAGFVTNEFYELEHQKFSTSRGHLVWGQELADRLPRDI 358

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
            RY L       +   +    L     A L        +R  +   +     +P   A  
Sbjct: 359 GRYHLAATSPENQRTNFGWSALAAVTGARLVEPW----NRVAAKAERWAGRTLPVSAASR 414

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
           E+   I +  +   +     +    + RA   +   +  +DR       WE+   +  +A
Sbjct: 415 EAAARITARFAAAYE-----LDTFSLGRAAETLAEQLGRLDR-------WEV---DDAQA 459

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANK 472
               +    V+R  A      +  LA +
Sbjct: 460 GDFYHQVQTVLRGAA----PILIDLAER 483


>gi|299823062|ref|ZP_07054948.1| leucine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816591|gb|EFI83829.1| leucine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 803

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y      YP+    H+GH       D+L+R  R+ G DVL   G D  G    + A 
Sbjct: 31  KKFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGFDVLHPIGWDAFGLPAEQYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           + G    +F ++N   F+     L  SYD    I TT+  ++   + +++K+ +KG  Y+
Sbjct: 91  DTGNDPAIFTEKNIATFKRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYEKGLAYE 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +         ++EV  G   +       PV       +  +++AY D+LL   E
Sbjct: 151 AEVAVNWCPALGTVLANEEVIDGKSERGGF----PVYRKPMRQWMLKITAYADRLLDDLE 206

Query: 182 SHPEFILPIERRNEVISFVK 201
                    + +   I   +
Sbjct: 207 LVDWPENIKDMQRNWIGKSE 226



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 57/414 (13%), Positives = 135/414 (32%), Gaps = 61/414 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R H+  +      + +   G++ +  ++G   + +  + N       + K  D    
Sbjct: 341 HDERDHEFAKQFALDIRPVLAGGNVEEAAFTGDGEIINSEFLNGLDKASGIAKMIDWLEE 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS-------- 202
           N             + F    Y  + +            +      +   K+        
Sbjct: 401 NHHGTRKTTYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEEELPLLLPKTTEIKPSGT 460

Query: 203 ---GLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
               L +LS      D   +        M  W         Y+  T      D +K + W
Sbjct: 461 GESPLANLSDWVNVVDENGRKGRRETNTMPQWAGSSWYFLRYIDPTNQEAIADKAKLEHW 520

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 521 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGGNNEKMSKSR 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +V+ + G D LR + +          ++ +GL+         G    + R   
Sbjct: 581 GNVVNPDDVVAKYGADTLRLYEMFMGPLEASIGWNDNGLE---------GARKFLDRVWR 631

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           + + D   +     A  E +  +     + ++ + E+ +N   +  ++Q++  +++  + 
Sbjct: 632 LFVTDTGEISDKITA--EPNHDLEKSYHQTVKVVTEHFENLRFNTGISQLMIFINDAYK- 688

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                                ++  + +     LL    P ++ +++ +L   +
Sbjct: 689 -------------------QAHLPKDYVEGFVRLLAPIAPHVSEELWQLLGHTE 723


>gi|147225159|emb|CAN13336.1| valyl-tRNA synthetase 2 [Sus scrofa]
          Length = 1264

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R            
Sbjct: 705  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRTEAEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHNQLVNSNLDPSEMEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +     +   G  + +D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSEPGGRESLADRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A +        +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAESARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 19/157 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    +           H+GHA    I D L R+HR+ G   L+  G D  G       +
Sbjct: 334 RGTFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVE 393

Query: 64  NAGVTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                 +                  + ++           L   + +D    T + +   
Sbjct: 394 KKLWREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSA 453

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           T    + ++ ++G IY+      +S    +  +D EV
Sbjct: 454 TVIEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|208022685|ref|NP_001094042.1| isoleucyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|149045018|gb|EDL98104.1| isoleucine-tRNA synthetase (predicted) [Rattus norvegicus]
          Length = 1262

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 61/460 (13%), Positives = 134/460 (29%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +     G   K       R  ++   +L       + +T    +  C 
Sbjct: 349 VCPVDASGCFTEEVTHFVGQYVKDADKNIIRMLKEQGRLL-------VASTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKSVPSWFVRVEHMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      +             L      ++    +  +  L++       G     
Sbjct: 462 YWGTPIPLWVSEDFEEVVCIGSVAELEELSGTKISDLHRESIDHLTIPS---RCGKGPLR 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RVSEVFDCWFESGSMPYAQVHYPFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I + G DALR +L+       ++ 
Sbjct: 579 FGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSIINKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N     +     +  ++    +       ES    D  ILS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLHKEEEVEFLYNEHTVRESPNITDRWILS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLIAFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L +  +    +  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKLLIDPASIRDKDT 798



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R K        +    PH GH     I D++ R+    G  V    G D HG  +     
Sbjct: 38  RPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEID 97

Query: 60  -------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                                  +  V + S  ++     L   I +D+  +T   +  +
Sbjct: 98  KTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSAEWKSTVTRLGRWIDFDNDYKTLYPQFME 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +   ++K++ DKG +Y+G     +S       ++ E  +   
Sbjct: 158 SVWWVFKQLYDKGLVYRGVKVMPFSTACGTPLSNFESNQNYK 199


>gi|47229870|emb|CAG07066.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 849

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 94/277 (33%), Gaps = 11/277 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 106 VFDCWFESGSMPYAQVHYPFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKP 165

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP  +++  G DALR +L+       ++  + +
Sbjct: 166 PFKNVIVNGLVLASDGQKMSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKE 225

Query: 344 DGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMI-----PTPGAFTESDESILSVCSR 396
           +G++  +             + ++V  + K+ D            +    D  I S    
Sbjct: 226 EGVRDVLKDVFLPWYNAYRFLVQNVQRLQKEEDNQFLYNENTAKQSDNIMDNWIQSFTQS 285

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q  +  M    ++  + +++  V    + Y    +     ++        L     V+
Sbjct: 286 LIQFFKAEMDAYRLYTVVPRLVKFVDMLTNWYVRTNRRRLKGESGTQDCLWALETLFSVL 345

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
             +  L+  F P +   ++  L    +    +  D  
Sbjct: 346 FSMCRLMAPFTPFITEMMYQNLRHLIDPDAVEEKDAG 382


>gi|301109721|ref|XP_002903941.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262096944|gb|EEY54996.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1176

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPAFLLSANLP 285
           +   W ++ +       Y           +PAD    G D  R +            + P
Sbjct: 533 VFDCWFESGSMPYAQQHYPFENKSKFEANFPADFVAEGLDQTRGWFYTLMVLSTALFDTP 592

Query: 286 LPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
             K +  +G +L   G K+SKSL N  DP E++++ G DALR +L+       +   +  
Sbjct: 593 AFKNLIVNGLVLAEDGRKMSKSLKNFTDPEEILQKYGADALRLYLINSPVVRAEPLKFQA 652

Query: 344 DGLKKRVNADLANGIG---NLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
            G+   +                ++  + L+     +P   A   S    D  I++    
Sbjct: 653 PGVLGVIREIFLPWFNSARFFAQQATRLQLETGAAFVPDRLAALASTNVMDSWIIAALQN 712

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ + E M+   ++  + +++S + ++ + Y    +P          A+  L    EV 
Sbjct: 713 LIKFVHEEMKAYRLYTVVPRLVSFIGQLTNWYVRLNRPRLKGSAGSAEAAVALSALYEVE 772

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             LA L+  F P     ++  L
Sbjct: 773 YNLAKLMAPFTPFFTEYMYQFL 794



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 23/153 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R+         +    PH GH     I D + R+    G  V    G D HG  +   
Sbjct: 42  KDRKPFTFYDGPPFATGLPHHGHILAGTIKDTVTRYAHQTGHYVERRFGWDCHGLPVENE 101

Query: 62  A-QNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +  GVTTK                     +  +  R  + +   +D   D   +T E 
Sbjct: 102 INKKLGVTTKEQVLEMGIDKYNAECRSIVQRYTSEWERVVKRIGRWIDCENDY--KTMEP 159

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
            + ++   +++ I DK  +Y+G     YS    
Sbjct: 160 WYMESVWNVFRTIFDKDLVYRGYKILPYSTACT 192


>gi|262044935|ref|ZP_06017977.1| isoleucine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037662|gb|EEW38891.1| isoleucine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 950

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 453 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEVAKRV 512

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 513 EVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 567

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 568 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 627

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 628 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 680

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 681 FDPAKDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 740

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       ++  L   +   +   A++I+  L    E   F
Sbjct: 741 DIIKDRQYTAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGEREKYVF 799



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGYDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDM-ADVLDISYDDFIR 96
            +             +     R+  A+ +D    DFIR
Sbjct: 118 VEQEYGKPGEKFTAAEFRAKCREYTAEQIDGQRKDFIR 155


>gi|28378066|ref|NP_784958.1| leucyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556279|ref|YP_003062696.1| leucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300769231|ref|ZP_07079119.1| leucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180248|ref|YP_003924376.1| leucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|32171523|sp|Q88XA9|SYL_LACPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28270900|emb|CAD63805.1| leucine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045206|gb|ACT61999.1| leucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300493260|gb|EFK28440.1| leucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045739|gb|ADN98282.1| leucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 808

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 6/196 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +++K Y      YP+ Q  H+GH       D+++RF R+ G +VL   G D  G    +
Sbjct: 28  TDKKKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRFKRMQGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F  +N +NF+     L  SY  D  + TT+  ++   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTAKNIKNFKRQIRSLGFSYDWDREVNTTDPSYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY---SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      +    +      N++ V    +   Y+    P++    +   +      D 
Sbjct: 148 AYESETLVNWAPDMMGGTVVSNEEVVDGKTERGGYDVYRVPMKQWSLKITAYADRLIDDL 207

Query: 176 LLSYYESHPEFILPIE 191
               +  + +      
Sbjct: 208 DDIDWPENIKEQQRNW 223



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 127/380 (33%), Gaps = 49/380 (12%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G   +           E +  + +V        ++ Q    + +    +    +   
Sbjct: 386 FVDGLAKQPAIDKMIDWLGEHHAGEKKVNYRLRDWIFSRQRYWGEPIPVIHWEDGETTLV 445

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI- 232
            +            LP  +  E     +S L ++       D   +        M  W  
Sbjct: 446 PEDE------LPLRLPATKNLEPSGTGESPLANIDDWVNVVDENGRKGKRETNTMPQWAG 499

Query: 233 --DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
                  Y+         D  K K+W P DL+V G +    H +Y   +         + 
Sbjct: 500 SSWYFLRYVDPHNREALADYDKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVP 559

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  K V     +    EK+SKS GNV++P +++++ G D LR + +          +
Sbjct: 560 TKEPFQKLVNQGMILGDNHEKMSKSRGNVVNPDDIVDQYGADTLRLYEMFMGPLEASIPW 619

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
             DGL         +G    + R   +++ + + +       T +D  +  + +  ++++
Sbjct: 620 STDGL---------HGANKWIERVWRLMIDENNRVRDRIT--TINDGKLTKIYNETVKKV 668

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+ +    + A++Q++  V+E  +                    V  + +  I     L
Sbjct: 669 TEDYEAMRFNIAISQMMVFVNEAYK--------------------VDDLPIIYIEGFVKL 708

Query: 462 LQAFVPKLANKIFDILFVAD 481
           L    P L+ +++ +L   D
Sbjct: 709 LSPIAPHLSEELWSLLGHDD 728


>gi|254519578|ref|ZP_05131634.1| leucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913327|gb|EEH98528.1| leucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 816

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 9/234 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           KE EKLY+    +YP+    H GH +     D  AR  R+ G +V    G D  G     
Sbjct: 28  KEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARMKRMQGYNVFQPMGFDAFGLPAEN 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  K   D+N          +    ++D+ + T    ++   + ++ K+ +KG 
Sbjct: 88  FAIKTGIHPKDSTDKNIETMEKQLKAMGAMFNWDNEVITCNPDYYKWTQWVFLKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         +++V++GA           V   +   +F +++ Y D+LL 
Sbjct: 148 AYRKKAPVNWCPSCNTVLANEQVHEGA----CERCSTEVTKKDLTQWFLKITDYADELLE 203

Query: 179 YYESHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             ++       +  +   I           +  S   FD      D    + YV
Sbjct: 204 KLDTLDWPEKTVAMQKHWIGKSTGAEVTFKVKNSDIKFDVFTTRVDTLNGVTYV 257



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 88/247 (35%), Gaps = 29/247 (11%)

Query: 254 KFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISK 305
           K  P D +V G +    H +Y             L  + P          +   G K+SK
Sbjct: 520 KMLPVDKYVGGPEHACMHLLYARFITKALRDMGYLDFDEPFKSLTHQGLILGPDGLKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN I P + I E G D  R +L+   A  + G +  DGLK    A   + I   +  +
Sbjct: 580 SKGNTISPNDYISEYGSDVFRMYLMFGFAYIEGGAWSDDGLKSV--ARFVDRIERYLDIA 637

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
              I  + +       A  E +  +       ++ + E+      + A+A+++  V+   
Sbjct: 638 REAIEANNNNKTTLDKAEKELNFWL----HNAIKGVTEDADKFQFNTAIARMMEFVNAFS 693

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV--ADEN 483
           +Y            +      +    V+ ++     L  F P  A + + +  +  +  N
Sbjct: 694 KYLQE---------DVKNLDFLKKTCVDFLKI----LAPFAPHFAEEQWSLFGLEFSIFN 740

Query: 484 RCFQSLD 490
             + + D
Sbjct: 741 EDWPTFD 747


>gi|305855130|ref|NP_001182307.1| valyl-tRNA synthetase [Sus scrofa]
 gi|162138236|gb|ABX82822.1| valyl-tRNA synthetase [Sus scrofa]
          Length = 1265

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R            
Sbjct: 706  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRTEAEAR 765

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 766  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 823

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 824  HDILFFWVARMVMLGLKLTGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 883

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 884  QGLHNQLVNSNLDPSEMEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 943

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +     +   G  + +D  I S  +  ++   +
Sbjct: 944  ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSEPGGRESLADRWIRSRLTEAVRLSNQ 1001

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A +        +     L
Sbjct: 1002 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAESARQTLYTCLDVGLRL 1060

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1061 LSPFMPFVTEELFQRL 1076



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 19/157 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           R    +           H+GHA    I D L R+HR+ G   L+  G D  G       +
Sbjct: 335 RGTFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVE 394

Query: 64  NAGVTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                 +                  + ++           L   + +D    T + +   
Sbjct: 395 KKLWREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSA 454

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           T    + ++ ++G IY+      +S    +  +D EV
Sbjct: 455 TVIEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 491


>gi|68249550|ref|YP_248662.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336023|sp|Q4QLU5|SYI_HAEI8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68057749|gb|AAX88002.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 941

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 150/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L+ L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLELLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +   ++  P
Sbjct: 532 LDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATNSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ-WMEEEGY 165
                K+ + G +YKG     + L   +   + EV              P +  +E E  
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESAVEIEAK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|294155496|ref|YP_003559880.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599965|gb|ADE19461.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 779

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 6/208 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K YI +   YP+   H+GH     I D +ARF+R  G +VL   G D  G     AA  
Sbjct: 32  PKKYILSMFPYPSGNVHMGHVRNYTIGDAIARFYRRKGFNVLHPFGWDAFGLPAENAAIK 91

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G+  K +  +N          L IS+  ++   T ++ +    + ++ ++  KG +Y+ 
Sbjct: 92  NGIHPKDWTYKNIEKMNKEIKKLGISFAWNEECITADEDYSKWEQFIFIELWKKGLVYRK 151

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                Y   D+    +++V               V   + E Y+ +++ Y ++LL+  E 
Sbjct: 152 KTELNYCEVDKTVLANEQVVND----LCWRCDTKVVKKQMEQYYLKITDYAEELLNDLEL 207

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLS 210
                       +     K    ++S  
Sbjct: 208 LEGHWPDQVITMQRNWIGKKEGINISFR 235



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 107/338 (31%), Gaps = 34/338 (10%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
            G   Q Y     P+   E  G     S      L           P+E  N+    VK 
Sbjct: 382 WGISRQRYWGNPIPLIKCERCGTIPVPSEKLPVKLPRDVIFNGSGNPLE-TNKKWLEVKC 440

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
                + SR+T         D  +    +    T              +   +   D ++
Sbjct: 441 PNCKKNASRET------DTLDTFFESSWYFMRYTTPKEKRDDNILITDNVKYWNSVDEYI 494

Query: 263 IGKDILRFHAIYWPAFLLSAN-------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            G +    H +Y   F    N             + + G +L  G K+SKS GNV+ P +
Sbjct: 495 GGIEHAILHLLYARFFAKVFNDLKLIPYREPFNNLLTQGMVLKDGSKMSKSKGNVVVPSD 554

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I+E G D  R F++      K+  +   G+    +  L   I      ++    K++D 
Sbjct: 555 MIKEYGADVTRLFILFAAPPLKELEWIDSGILG-CHKFLRRIITLSEKFNIKNNFKNFDI 613

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+   +     + L+   +       +  ++  +  ++     +D  +  +
Sbjct: 614 NQLNSTE-KEARRKLYLGLKKSLEIFEDRRNEYAFNTIISWCMETLNA----YDQVENEK 668

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           L                E       +L+ F+P L+ ++
Sbjct: 669 LIS--------------EYFYVTLNILEPFMPHLSWEL 692


>gi|291059962|gb|ADD72697.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 887

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            + Y+     YP+AQ  H+GH       D+  R+ R+ G +VL   G D  G      A 
Sbjct: 43  RRAYVLDMFPYPSAQGLHVGHPEGYTATDIYCRYLRMGGYNVLHPMGFDAFGLPAENFAL 102

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   +V    N   FR        SYD    I T +  ++   + L+ K+ +KG  Y+
Sbjct: 103 KTGTHPRVSTSANCDTFRRQIQSFGFSYDWEREISTADPEYYRWTQWLFLKLYEKGLAYE 162

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    ++EV               V       +  R++AY ++LLS  +
Sbjct: 163 ATAPINWCPSCKTGLANEEVRD----ACCERCGAEVTRRGVRQWMVRITAYAERLLSDLD 218

Query: 182 SHPEFILPIERRNEVI 197
                    + +   I
Sbjct: 219 ELDWPESVKQMQRNWI 234



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 99/303 (32%), Gaps = 69/303 (22%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+            K ++W P  L+V G +    H +Y   W   L
Sbjct: 524 PQWAGSCW--YYLRYMDPRNKTAFCAPEKERYWAPVALYVGGAEHAVLHLLYARFWHKVL 581

Query: 280 LSANLPLPKKVF----------SHGFILHKGE---------------------------- 301
               L   K+ F          S+ +    G                             
Sbjct: 582 YDLGLVSTKEPFARLVNQGMITSYAYRRKNGALVPHDEVHTNAQGTYVHARTGEKLECVV 641

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SK+L NV++P ++I   G DA R + +          ++  GL           I  
Sbjct: 642 AKMSKALKNVVNPDDMIAAYGADACRVYEMFMGPLEASKPWNTQGLVGVFR--FLEKIWV 699

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE-----SILSVCSRVLQEIRENMQNQLIHRALA 415
           L  R  +      D     PG      +     ++ ++  R +Q++ ++      + A++
Sbjct: 700 LAGRVAAANGIPQDSRAEPPGDLHAQKKSCSMYALETLLHRTIQKVTDDTSALSFNTAIS 759

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  V+E  R    + P                +  ++      +L  + P LA ++++
Sbjct: 760 QMMIFVNEATR-VARRMP----------------LPSKMWEMFVKILSPYAPHLAEELWE 802

Query: 476 ILF 478
           +  
Sbjct: 803 MCG 805


>gi|329766498|ref|ZP_08258042.1| valyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137097|gb|EGG41389.1| valyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 773

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 127/365 (34%), Gaps = 22/365 (6%)

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
            Y        E      +        +     N ++ +  +    R   Y  ++  +Y  
Sbjct: 356 EYYLKQKEAIEKMKKLGQEITFYPAMHKQILMNWLESINIDWPISRRRYYGTEIPIWYCK 415

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
                       E   + K  L+   ++  +   G +     +     W+D+  + L  +
Sbjct: 416 SCS----EPHVPEPGKYYKPWLEKCPINNCSKCKGTE-FVGEERTFDTWMDSSVSPLFVS 470

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKG 300
            Y  +      K +P  +    KDI+R    Y       L+   P  +       +  KG
Sbjct: 471 KYNKDQKF-FNKVYPTSIRPQAKDIVRTWLYYTLLRCEQLTGKKPWSEAWVMGYGLDEKG 529

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN IDP+ VIE+ G D  R++   EI  G D   ++  ++        + + N
Sbjct: 530 MKMSKSKGNAIDPLPVIEQFGADTFRFWSASEINHGYDFRCNEQKIES--TKKFLSKLWN 587

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            VSR +S         +   G  TE+D+ IL+    +++E ++             +   
Sbjct: 588 -VSRFLS------SFPVIESGIPTETDKWILAELDNLIKECKKGYDEYNFFIPAIAIREF 640

Query: 421 VS--EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                   Y +  K        ++ +R   + Y   + +  +  LL    P +   ++  
Sbjct: 641 TWNLFAAHYIEMVKARAYGIGFSDEERDGAI-YTLHKTLSTILKLLAPITPFITEHLWKT 699

Query: 477 LFVAD 481
           L+ ++
Sbjct: 700 LYSSE 704



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 3   EREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   I T   YP+ +P HIG A      D++AR  R+ G +V F  G D +G  +   
Sbjct: 33  KDDNFTIDTPPPYPSGRPWHIGAAAHYSQIDMIARTARMAGKNVYFPIGIDRNGLPVEIY 92

Query: 62  AQNAGVTTKVFVDQ-------------NSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
            +          ++                    +   L IS D  ++ RT  + +    
Sbjct: 93  TEKKHNIRMRETERGEFLKLCRSALDDLEAEMILIMKSLGISGDFANYYRTDSEEYRTLT 152

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +  +  +  KG +Y       Y         D E+  
Sbjct: 153 QSTFIDLWKKGQVYLANRPNNYDWVSGTTIADAEITY 189


>gi|298208149|ref|YP_003716328.1| putative valyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83848070|gb|EAP85940.1| putative valyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 876

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 125/365 (34%), Gaps = 56/365 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++       L         ++P +  N         ++D ++SR+   W
Sbjct: 350 IEPKLSDQWFLKMKELAQPALDAVLEKEVALVPEKFINT-YRHWMENVRDWNISRQ-LWW 407

Query: 217 GIKIP---------------------------------------DDPQYIMYVWIDALTN 237
           G +IP                                        DP   +  W  +   
Sbjct: 408 GHQIPAYYYGDAKEDYVVAETKEDALKLAKEKSNNQDLKLEDLRQDPDA-LDTWFSSWLW 466

Query: 238 YLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHG 294
            ++    +  PD  +   ++P +  V   +IL F    +    +      P      +  
Sbjct: 467 PMSVFNGILEPDNKEINYYYPTNDLVTAPEILFFWVARMIIAGYEYRGEKPFNNVYLTGI 526

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
               +  K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+D  K+   +  
Sbjct: 527 VRDKQRRKMSKSLGNSPDPLMLIDKYGADGIRVGMLLSSPAGNDLMFDEDLCKQ--GSGF 584

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
            N I N     +     + D     P     + +   +   + L E+ ++     +  AL
Sbjct: 585 VNKIFNASRLILGW---EVDENKDQPDYAKTAIDWYEAKFQKALVELEDHYSKYRMSDAL 641

Query: 415 AQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                L+ +     + +  KP   +K +     T     V ++     +L  FVP ++ +
Sbjct: 642 MTTYKLIWDDFCSWFLEMIKPPYGEKID----GTTFKSAVSILENNLKVLHPFVPFISEE 697

Query: 473 IFDIL 477
           I+  +
Sbjct: 698 IWQNI 702



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 18/161 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +RE   I           H+GH     I DVL R  RL G +  +  GTD        
Sbjct: 30  VDDREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEA 89

Query: 61  AAQNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
              N                       +  ++     +    L  S D      T ++  
Sbjct: 90  KVVNKLKEEGINKNDLTREQFLEHAWEWTHKHGGIILEQLKKLGASCDWERTAFTMDEDL 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +   ++  + +KG +Y+G     +  + +   +D+EV  
Sbjct: 150 SKSVIKVFVDLHNKGHVYRGYRMVNWDPQAKTTLSDEEVIH 190


>gi|146310248|ref|YP_001175322.1| isoleucyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145317124|gb|ABP59271.1| Isoleucyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 948

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E      + L+ +    K  
Sbjct: 451 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELHPNTLELMEEVAKRV 510

Query: 215 DW-GIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 511 EADGIQAWWDLDSNEILGADADNYEKVPDTLDVWFDSGSTHSSVVDVRPEFSGHA----- 565

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 566 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 625

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 626 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 678

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 679 FNPVTDMVKPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 738

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 739 DIIKDRQYTAKPDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWAYLPGDREKYVF 797



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 56  KGKKSFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLTGFDSPYVPGWDCHGLPIELK 115

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMADV-LDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 116 VEQEYGKPGEKFTAAEFRAKCREYAAAQVDGQRKDFIRLGVLGDWSRPYLTMDFKTEANI 175

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 176 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFHAVDPDAVKAK 235

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S+    +     +   + LP  R
Sbjct: 236 FGVSSVNGPISLVIWTTTPWTLPANR 261


>gi|295098546|emb|CBK87636.1| Isoleucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 938

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E      + L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELHPNTLELMEEVAKRV 500

Query: 215 D-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EVDGIQAWWDLDARDILGADADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +       ++I +  ++   H  + +++   S      Y 
Sbjct: 669 FDPVKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 787



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 62/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRADFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFEAVDQDAIKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F L      +     +   + LP  R
Sbjct: 226 FGLPGVSGPISLVIWTTTPWTLPANR 251


>gi|284044283|ref|YP_003394623.1| leucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948504|gb|ADB51248.1| leucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 819

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 6/201 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R   Y+   + YP+ +PH+GH     + D +A F+R  G  VL   G D  G      A
Sbjct: 36  GRPPYYVLEMLPYPSGEPHMGHMKNYALGDAVAHFNRRIGRRVLHPMGYDAFGLPAENNA 95

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              GV  +    ++  +F+       IS D      T E R++   + L+ ++ ++G  Y
Sbjct: 96  IRTGVHPRDATAESIASFQRQFREWGISIDWTREFGTHEPRYYRWTQWLFLQLYERGLAY 155

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   +  +   D+    +++V  G            V+  +   +FF ++ Y D+LL+  
Sbjct: 156 RKEAAVNWCPNDQTVLANEQVVDGH----CERCGFEVEVRQLVQWFFAITRYADRLLADL 211

Query: 181 ESHPEFILPIERRNEVISFVK 201
           ++          +   I   +
Sbjct: 212 DTIQWPEHVKTMQRNWIGRSE 232



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 116/338 (34%), Gaps = 43/338 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + ++ G     +A     L     +           E            
Sbjct: 430 QRYWGCPIPIVYCDDCGAVPVPAADLPVELPDVTEYKPRGRSPLAAAEEWVNTTCPRCGG 489

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
           +  R+T         D              Y          D + A  W P D ++ G +
Sbjct: 490 AARRET---------DTMDTFVDSSWYFLRYTDANNDEAAWDRTVADRWMPVDQYIGGVE 540

Query: 267 ILRFHAIY-------WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
               H +Y       +    L  +    + +F+ G I   G K+SKS GNVI P   ++ 
Sbjct: 541 HAILHLLYARFFTKAFADMGLLGSDEPFQALFTQGMITRDGAKMSKSKGNVISPSTYVDR 600

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +++      +D  +  +G++         G+   ++R   +  +   G   +
Sbjct: 601 YGADTARCYILFIGPPDQDADWSDEGVE---------GVHRFLARLWRLGDELGAGSCDS 651

Query: 380 PGAFTE-SDESILSVCSRVLQEIRENMQ-NQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
           P A +  +D ++       ++++  ++      + A++ V+ LV+E  R+ ++  P    
Sbjct: 652 PAAGSLSADVAVARKAHWAIEKVTNDVSGRFAFNTAISAVMELVNECYRHRESASP---- 707

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                       V        A L+  F P + +++++
Sbjct: 708 -----------EVLRFACATAASLVFPFAPHVGSEVYE 734


>gi|254168296|ref|ZP_04875142.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622805|gb|EDY35374.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1037

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 138/385 (35%), Gaps = 18/385 (4%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  Y      R+E   N++ V    +   +    N ++  E + +    + Y    
Sbjct: 406 YYALDTWYIKMSKKREELIKNNETVNWKPEHLKHGRFGNFLE--EVKDWALSRNRYWGTP 463

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------WGIKIPDDPQY 226
           L  +      +   E + ++++  +                         G ++  +P Y
Sbjct: 464 LPVWTCPDGHVFIPEGKEDLLNHAEPDSIPEHFELHRPYVDELKIKCPVCGKEMKREP-Y 522

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+ +       Y         + +P D      D     F+ +   + ++    
Sbjct: 523 LIDVWFDSGSAPFAQFHYPYENKDEFERSFPVDFITEALDQTRGWFYTLMAISTVVFNRA 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   GEK+SKS GN +DP+E++  VG DA+R +        K   + ++
Sbjct: 583 PYKNVLTLGLILDEDGEKMSKSKGNAVDPMEIMNNVGADAVRLYF-YSTPVWKSRRFSEN 641

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +++     L       V    +  L ++           E D  +LS  +  + E+R+N
Sbjct: 642 LVREYAQKTLMTLWNVYVFFKNNASLDNFTP-DKIGEIKNELDSWLLSRLNTTIVEVRKN 700

Query: 405 MQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +  IH+A   +   + E+ + Y    +    K+   +   +        +++LA LL 
Sbjct: 701 LDSLDIHKATKAIEVFIDELSNWYLRRSRRRFWKEEVGEDKISAYTSLYLALKELAKLLA 760

Query: 464 AFVPKLANKIFDILFVADENRCFQS 488
            F P  A  ++  L+   E+   + 
Sbjct: 761 PFTPFFAEYMYGNLWGKKESVHLED 785



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 20/189 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +  E+          N  PHIGHA    + D++ R+  +DG DV  +  G D HG  +  
Sbjct: 47  RGNERFIFLEGPPTANGMPHIGHALTRSVKDIILRYKAMDGYDVQPWIGGWDCHGLPVEI 106

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
             +                       +  V +    +  M   +   I  ++   T E  
Sbjct: 107 EVEKKLGINSKREIEKFGIREFNKLCRESVFKYRDEWIKMTKRIGFWIDMENAYVTMEDY 166

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + ++     KK+ ++G + K      Y  R     +  EV +G       + +   +  +
Sbjct: 167 YIESVWWALKKMYEEGLLVKDYKVVPYCPRCGTPLSSHEVAQGYKNVKDPSVYVKFKVKD 226

Query: 162 EEGYFFRLS 170
           E  YF   +
Sbjct: 227 ENAYFLVWT 235


>gi|153854588|ref|ZP_01995858.1| hypothetical protein DORLON_01853 [Dorea longicatena DSM 13814]
 gi|149752897|gb|EDM62828.1| hypothetical protein DORLON_01853 [Dorea longicatena DSM 13814]
          Length = 809

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++EK Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 34  KKEKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIIHPMGWDAFGLPAENY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV  ++    N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 94  AIKMGVHPEISTAANIKNIKRQINEIAALYDWDREVNTTDPNFYKWTQWIFVKMFKEGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV     G         V       +  +++ Y D+LL+ 
Sbjct: 154 YEKEFPINWCPSCKTGLANEEVV----GGKCERCGAEVTKKNLRQWMLKITKYADRLLND 209

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 210 LDKLDWPEKVKKMQADWI 227



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 102/263 (38%), Gaps = 46/263 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSK------AKFWPADLHVIGKDILRFHAIYWPAFL------- 279
            A +++       ++ D          +  P D+++ G +    H +Y   +        
Sbjct: 502 WAGSSWYFLRYVDNHNDKELVSREKADEMLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIG 561

Query: 280 -LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +  + P  K           G K+SKS GNV+ P +++ + G D+LR + +       D
Sbjct: 562 VVDFDEPFHKLFNQGMITGKNGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELD 621

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D  G+         +G+   + R  ++++   D  I          + ++    +++
Sbjct: 622 AEWDDRGI---------DGVNRFLKRVWNLVMDSKDADITAT-------KEMIKERHKLV 665

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            ++   +++  ++  ++  +      ++  +  K    K+   D+         E +  +
Sbjct: 666 YDVTTRLESFSLNTVISAFME---HNNKLLEIAK----KEGGIDK---------ETLSTM 709

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
           A+LL  F P +A ++++ L   +
Sbjct: 710 AVLLSPFAPHVAEELWEELGHTE 732


>gi|21220556|ref|NP_626335.1| isoleucyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256788305|ref|ZP_05526736.1| isoleucyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772199|ref|ZP_06531577.1| isoleucyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|81625248|sp|Q9S2X5|SYI_STRCO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5689948|emb|CAB51985.1| putative isoleucyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702398|gb|EFD69827.1| isoleucyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 1047

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 19/390 (4%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G+Y +  +N + W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAIKDRLLQENEKTNWFPDAVKHGRYGDWLNNNIDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++          +  L+   S  E           +   +  + D++ +       
Sbjct: 455 SRNRYWGTPLPIWRCAEDHLTVVGSRAELTELSGTDQSSLDPHRPFIDDVTFTCAQEGCS 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 LEAVRVPE-VIDAWYDSGSMPFAQWGYPYKNKELFESRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGN-----LVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                     +++ V   L           L +R+      + D   P P      D  +
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTTGWAPSEAD---PAPADRPVLDRWL 690

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           LS    +  ++ + +      RA   + + V ++  ++  +      + +     T    
Sbjct: 691 LSELHALTDQVTQALDAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT---- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             EV+  +  L+    P +  +++  L V 
Sbjct: 747 LHEVVETVTKLMAPLTPFITERVWQDLVVP 776



 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                       +  V +++  F ++   +    D  D  RT +  +
Sbjct: 100 VEKELGFSGKQDIEAYGIAEFNAKCRESVTRHTDAFEELTTRMGYWADLQDPYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 160 IESVWWSLKEIFNKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|325262565|ref|ZP_08129302.1| leucine--tRNA ligase [Clostridium sp. D5]
 gi|324032397|gb|EGB93675.1| leucine--tRNA ligase [Clostridium sp. D5]
          Length = 809

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      
Sbjct: 34  KKQKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLLQGHYIVHPMGWDAFGLPAENY 93

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   D       +D  + TT+   +   + ++ K+  +G  
Sbjct: 94  AIKMGVHPAKSTAENVANIKRQIDEIAALYDWDMEVNTTDPDFYKWTQWIFVKMFKEGLA 153

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY ++LLS 
Sbjct: 154 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLKITAYAERLLSD 209

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +++ I
Sbjct: 210 LDKLDWPEKVKKMQSDWI 227



 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 120/348 (34%), Gaps = 60/348 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 419 YKLRDWVFSRQRYWGEPIPIIHCPDCGAVPVPEEELPLRLPDVESYEPTGTGESPLAGIE 478

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
           +  +    +   P       M  W    +++       ++            +  P D++
Sbjct: 479 EWVNCKCPVCGKPAKRETNTMPQWA--GSSWYFLRYVDNHNQEELVSREKADEMLPVDMY 536

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G K+SKS GNV+ P
Sbjct: 537 IGGVEHAVLHLLYSRFYTKFLCDIGVVDFDEPFQKLFNQGMITGKNGIKMSKSKGNVVSP 596

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++ + G D+LR + +       D  +D  G+         +G+   + R  ++++   
Sbjct: 597 DDLVSDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKRLWNLLMDSC 647

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +  +          + ++   +R++ +I   ++   ++  ++  +      +++ D  K 
Sbjct: 648 EKDVKAT-------KEMIKQRNRLVYDITNRLETFSLNTVISGFMEYN---NKFIDIAK- 696

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              K+   D+         E +  +A+LL  F P  A ++++ L   +
Sbjct: 697 ---KEGGIDK---------ETLEAVAVLLAPFAPHFAEEMWEQLGHTE 732


>gi|148694749|gb|EDL26696.1| valyl-tRNA synthetase 2, isoform CRA_c [Mus musculus]
          Length = 873

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +++   N   W      ++        +  +  + P    P  R            
Sbjct: 314 HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 373

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 374 EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 431

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 432 HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 491

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L    + G+D   D + 
Sbjct: 492 QGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 551

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 552 ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNE 609

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 610 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 668

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 669 LSPFMPFVTEELFQRL 684


>gi|46447288|ref|YP_008653.1| valyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81626581|sp|Q6MAM1|SYV_PARUW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46400929|emb|CAF24378.1| probable valyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 949

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 137/408 (33%), Gaps = 99/408 (24%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++  +  KL    ++    ++P    +    ++   L+D  +SR+   W
Sbjct: 353 IEPYLSKQWFVKMDGFSKKLREVVQNGQVKLIPSHWESTYFHWID-NLRDWCISRQ-LWW 410

Query: 217 GIKI------------------------------PDDPQYIMYVWIDALTNYLTTTGYLD 246
           G +I                                    ++  W  +     +T G+ +
Sbjct: 411 GHRIPIWYHKEDSNRLICYAGSDLPDEVKNAPEEWIQDSDVLDTWFSSALWPFSTLGWPE 470

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHA----------------------------IYWPAF 278
                 AKF+P  + V G DIL F                               YW   
Sbjct: 471 QTS-ELAKFYPTSVLVTGHDILFFWVARMILMGDYALDQPPFPETYLLGLIYGKSYWRQE 529

Query: 279 --------------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                               P+PK+VFS      K EK+SKS GN+IDP+E+I++ G DA
Sbjct: 530 SNGGILYVNEQERSDFDMGKPIPKEVFS------KWEKMSKSKGNIIDPLEMIDQFGTDA 583

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------ 378
           +R  L       +    D+   ++  N    N I N   R V M L   +          
Sbjct: 584 VRMALCASATQARQIDLDRRRFEEFKN--FTNKIWNGA-RFVLMNLDGNEQNRTMSLTSQ 640

Query: 379 ------TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDA 430
                     FT  D  ILSV +R ++ +  ++ +    +A  +            Y + 
Sbjct: 641 GFSQGLDEALFTLEDRWILSVLNRTVESVNVHLNHYQFDQAAIEAYDFFWKEFCAYYVEI 700

Query: 431 QKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDIL 477
            KP    K    +  T     +  V+ Q   L+    P +  ++F IL
Sbjct: 701 AKPILFGKIGTAQERTNKQKLLVIVLCQAIRLIHPMAPFITEELFHIL 748



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +    I           H+GHA    + D+L R+ R+ G + L+  GTD  G     
Sbjct: 32  LSNKPTYCIVIPPPNVTGVLHMGHALVNTVQDILIRWKRMLGFETLWVPGTDHAGIATQM 91

Query: 61  AAQNAGVTTK---------------VFVDQ------NSRNFRDMADVLDISYDDFIRTTE 99
             +   + T+               V+  +           + + +  D +   F  T +
Sbjct: 92  VVERHLIKTEGKKRTDYTREEFLKHVWTWKEKSENRIIEQLKRLGNSCDWTRLRF--TMD 149

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           + +    R ++KK+ D G IY+G Y   +    +    DDEV       +      P++ 
Sbjct: 150 ENNSLAVRTMFKKLFDDGLIYRGDYLVNWDPHTQTALADDEVEYEDKQSFLWYFKYPLRD 209

Query: 160 MEE 162
             E
Sbjct: 210 ESE 212


>gi|190149313|ref|YP_001967838.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307262626|ref|ZP_07544256.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|254782357|sp|B3GZN4|SYI_ACTP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189914444|gb|ACE60696.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306872049|gb|EFN03763.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 938

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 518 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 779



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 106 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|289595832|ref|YP_003482528.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533619|gb|ADD07966.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1024

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 137/385 (35%), Gaps = 18/385 (4%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  Y      R+E   N++ V    +   +    N ++  E + +    + Y    
Sbjct: 393 YYALDTWYIRMSKKREELIKNNETVNWKPEHLKHGRFGNFLE--EVKDWALSRNRYWGTP 450

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------WGIKIPDDPQY 226
           L  +      +   E + +++   +                         G ++  +P Y
Sbjct: 451 LPVWTCPDGHVFIPEGKEDLLKHAEPDSIPEHFELHRPYVDELKIKCPVCGKEMKREP-Y 509

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+ +       Y         + +P D      D     F+ +   + ++    
Sbjct: 510 LIDVWFDSGSAPFAQFHYPYENKDEFERSFPVDFITEALDQTRGWFYTLMAISTVVFNRA 569

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   GEK+SKS GN +DP+E++  VG DA+R +        K   + ++
Sbjct: 570 PYKNVLTLGLILDEDGEKMSKSKGNAVDPMEIMNNVGADAVRLYF-YSTPVWKSRRFSEN 628

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +++     L       V    +  L ++           E D  +LS  +  + E+R+N
Sbjct: 629 LVREYAQKTLMTLWNVYVFFKNNASLDNFTP-DKIGEIKNELDSWLLSRLNTTIVEVRKN 687

Query: 405 MQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +  IH+A   +   + E+ + Y    +    K+   +   +        +++LA LL 
Sbjct: 688 LDSLDIHKATKAIEVFIDELSNWYLRRSRRRFWKEEVGEDKISAYTSLYLALKELAKLLA 747

Query: 464 AFVPKLANKIFDILFVADENRCFQS 488
            F P  A  ++  L+   E+   + 
Sbjct: 748 PFTPFFAEYMYGNLWGKKESVHLEE 772



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 20/189 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +  E+          N  PHIGHA    + D++ R+  +DG D+  +  G D HG  +  
Sbjct: 34  RGNERFIFLEGPPTANGMPHIGHALTRSVKDIILRYKAMDGYDIQPWIGGWDCHGLPVEI 93

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
             +                       +  V +    +  M   +   I  ++   T E  
Sbjct: 94  EVEKKLGINSKREIEKFGIREFNKLCRESVFKYRDEWIKMTKRIGFWIDMENAYVTMEDY 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + ++     KK+ ++G + K      Y  R     +  EV +G       + +   +  +
Sbjct: 154 YIESVWWALKKMYEEGLLVKDYKVVPYCPRCGTPLSSHEVAQGYKNVKDPSVYVKFKVKD 213

Query: 162 EEGYFFRLS 170
           E  YF   +
Sbjct: 214 ENAYFLVWT 222


>gi|147678155|ref|YP_001212370.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274252|dbj|BAF60001.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 932

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 135/398 (33%), Gaps = 40/398 (10%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE---- 163
                +      ++     ++   ++ + + D   + A       +  P +W EE     
Sbjct: 389 KCSTILHQYPHCWRCKKPVFFRATEQWFASIDGFRQAALDAIRKVRWIP-EWGEERIYNM 447

Query: 164 ------GYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISFVKSGLKD 206
                     R  ++   +  +Y  +                   +    + F +     
Sbjct: 448 VAGRGDWCISRQRSWGVPIPIFYCKNCGEILISSETIGYLQKLFRKHGSDVWFAREAADL 507

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
           L         G         IM VW D+ T+++            +   WPADL++ G D
Sbjct: 508 LPPGVTCRRCGGGEFVKETDIMDVWFDSGTSHMGVLDEPSIWPDLR---WPADLYLEGSD 564

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++    +  ++   P    +     +  +G K+SKSLGNVIDP +VI+++G D 
Sbjct: 565 QHRGWFNSSLSTSVAVTGQAPYRMVLTHGFVVDEQGRKMSKSLGNVIDPAKVIKQMGADI 624

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGA 382
           LR ++        D    ++ LK+   +     I N   R +   L D+D        G 
Sbjct: 625 LRLWV-SSADYRGDLAVSQNILKQMTES--YRKIRNTC-RFLLGNLYDFDPAGDRVEYGQ 680

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTN 440
             E D   L    +++Q++    +N   H     V    +V     Y D  K      T 
Sbjct: 681 MHEVDRWALVRLQKLIQKVIAAYRNYEYHVVYHAVHGFCVVDMSALYLDIIKDRLY--TA 738

Query: 441 PDR---ASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           P R         V  EV+  L  L+   +   + +I+ 
Sbjct: 739 PARSTARRAAQTVLYEVLVALVRLIAPVLAFTSEEIWQ 776



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+G A   I+ D++ +FH +DG D  +  G D HG  I + 
Sbjct: 48  KGRPKFILHDGPPYANGHIHLGTALNKILKDIIVKFHSMDGYDAPYVPGWDTHGLPIEQQ 107

Query: 62  AQN------AGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
           A          +         K F  +     R+    L +   +D    T    +    
Sbjct: 108 AIKAFGLNRHDIHPVEFRRKCKEFALKFVDIQREEFKRLGVRGQWDKPYLTLMPHYEARQ 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IYKG    ++    E    + EV  G           PV
Sbjct: 168 IGVFGEMARKGYIYKGLKPVYWCAACETALAEAEVEYGDKQSASIYVRFPV 218


>gi|254168356|ref|ZP_04875201.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622637|gb|EDY35207.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1037

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 137/385 (35%), Gaps = 18/385 (4%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
                  Y      R+E   N++ V    +   +    N ++  E + +    + Y    
Sbjct: 406 YYALDTWYIRMSKKREELIKNNETVNWKPEHLKHGRFGNFLE--EVKDWALSRNRYWGTP 463

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------WGIKIPDDPQY 226
           L  +      +   E + +++   +                         G ++  +P Y
Sbjct: 464 LPVWTCPDGHVFIPEGKEDLLKHAEPDSIPEHFELHRPYVDELKIKCPVCGKEMKREP-Y 522

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+ +       Y         + +P D      D     F+ +   + ++    
Sbjct: 523 LIDVWFDSGSAPFAQFHYPYENKDEFERSFPVDFITEALDQTRGWFYTLMAISTVVFNRA 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   GEK+SKS GN +DP+E++  VG DA+R +        K   + ++
Sbjct: 583 PYKNVLTLGLILDEDGEKMSKSKGNAVDPMEIMNNVGADAVRLYF-YSTPVWKSRRFSEN 641

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +++     L       V    +  L ++           E D  +LS  +  + E+R+N
Sbjct: 642 LVREYAQKTLMTLWNVYVFFKNNASLDNFTP-DKIGEIKNELDSWLLSRLNTTIVEVRKN 700

Query: 405 MQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +  IH+A   +   + E+ + Y    +    K+   +   +        +++LA LL 
Sbjct: 701 LDSLDIHKATKAIEVFIDELSNWYLRRSRRRFWKEEVGEDKISAYTSLYLALKELAKLLA 760

Query: 464 AFVPKLANKIFDILFVADENRCFQS 488
            F P  A  ++  L+   E+   + 
Sbjct: 761 PFTPFFAEYMYGNLWGKKESVHLEE 785



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 20/189 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVL-FTTGTDEHGQKIAK 60
           +  E+          N  PHIGHA    + D++ R+  +DG D+  +  G D HG  +  
Sbjct: 47  RGNERFIFLEGPPTANGMPHIGHALTRSVKDIILRYKAMDGYDIQPWIGGWDCHGLPVEI 106

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
             +                       +  V +    +  M   +   I  ++   T E  
Sbjct: 107 EVEKKLGINSKREIEKFGIREFNKLCRESVFKYRDEWIKMTKRIGFWIDMENAYVTMEDY 166

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
           + ++     KK+ ++G + K      Y  R     +  EV +G       + +   +  +
Sbjct: 167 YIESVWWALKKMYEEGLLVKDYKVVPYCPRCGTPLSSHEVAQGYKNVKDPSVYVKFKVKD 226

Query: 162 EEGYFFRLS 170
           E  YF   +
Sbjct: 227 ENAYFLVWT 235


>gi|15639574|ref|NP_219024.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025813|ref|YP_001933585.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094405|sp|O83595|SYL_TREPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695266|sp|B2S3H7|SYL_TREPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3322882|gb|AAC65562.1| leucyl-tRNA synthetase (leuS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018388|gb|ACD71006.1| leucyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 878

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            + Y+     YP+AQ  H+GH       D+  R+ R+ G +VL   G D  G      A 
Sbjct: 34  RRAYVLDMFPYPSAQGLHVGHPEGYTATDIYCRYLRMGGYNVLHPMGFDAFGLPAENFAL 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   +V    N   FR        SYD    I T +  ++   + L+ K+ +KG  Y+
Sbjct: 94  KTGTHPRVSTSANCDTFRRQIQSFGFSYDWEREISTADPEYYRWTQWLFLKLYEKGLAYE 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    ++EV               V       +  R++AY ++LLS  +
Sbjct: 154 ATAPINWCPSCKTGLANEEVRD----ACCERCGAEVTRRGVRQWMVRITAYAERLLSDLD 209

Query: 182 SHPEFILPIERRNEVI 197
                    + +   I
Sbjct: 210 ELDWPESVKQMQRNWI 225



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 99/303 (32%), Gaps = 69/303 (22%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFL 279
           PQ+    W      Y+            K ++W P  L+V G +    H +Y   W   L
Sbjct: 515 PQWAGSCW--YYLRYMDPRNKTAFCAPEKERYWAPVALYVGGAEHAVLHLLYARFWHKVL 572

Query: 280 LSANLPLPKKVF----------SHGFILHKGE---------------------------- 301
               L   K+ F          S+ +    G                             
Sbjct: 573 YDLGLVSTKEPFARLVNQGMITSYAYRRKNGALVPHDEVHTNAQGTYVHARTGEKLECVV 632

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SK+L NV++P ++I   G DA R + +          ++  GL           I  
Sbjct: 633 AKMSKALKNVVNPDDMIAAYGADACRVYEMFMGPLEASKPWNTQGLVGVFR--FLEKIWV 690

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDE-----SILSVCSRVLQEIRENMQNQLIHRALA 415
           L  R  +      D     PG      +     ++ ++  R +Q++ ++      + A++
Sbjct: 691 LAGRVAAANGIPQDSRAEPPGDLHAQKKSCSMYALETLLHRTIQKVTDDTSALSFNTAIS 750

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  V+E  R    + P                +  ++      +L  + P LA ++++
Sbjct: 751 QMMIFVNEATR-VARRMP----------------LPSKMWEMFVKILSPYAPHLAEELWE 793

Query: 476 ILF 478
           +  
Sbjct: 794 MCG 796


>gi|225010896|ref|ZP_03701363.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004943|gb|EEG42898.1| valyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 878

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 130/364 (35%), Gaps = 54/364 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++       L       E  L  ++           ++D ++SR+   W
Sbjct: 350 IEPRLSDQWFLKMETLAQPALKAVLEDKEVKLFPKKFENTYRHWMENIRDWNISRQ-LWW 408

Query: 217 GIKIP--------------------------------------DDPQYIMYVWIDALTNY 238
           G +IP                                         +  +  W  +    
Sbjct: 409 GQQIPAFYFGDGREDFVVAENIDTALILAKEKSGNSSLTSQDLRQDEDALDTWFSSWLWP 468

Query: 239 LTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++    +  PD  +   ++P +  V G DIL F    +    +      P     F+   
Sbjct: 469 MSVFNGILEPDNEEINYYYPTNDLVTGPDILFFWVARMVVAGYEFRGEKPFSNVYFTGLV 528

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  D +++IE+ G D +R  L+   A G D  +D+   ++  N   A
Sbjct: 529 RDAQRRKMSKSLGNSPDALKLIEDYGADGVRVGLLLSSAAGNDLMFDEALCQQGKN--FA 586

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           N I N      S  + D    IP P A  ++ E   ++ ++ + EI ++     I  AL 
Sbjct: 587 NKIWNGFRLIQSWEVAD----IPQPEAAKKAIEWYTALFNKTVLEIEDDFSKYRISDALM 642

Query: 416 QVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               L+ E       +  KP   +  +    + V+ +    +R     L  F+P L+  I
Sbjct: 643 ATYKLLWEHYSSWLLELIKPHYQQPVDRTTKAQVIALMENNLRI----LHPFMPFLSEDI 698

Query: 474 FDIL 477
           +  +
Sbjct: 699 WQQI 702



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           ER    I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  ERTPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRKARLQGFNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      +    L  S  +D    T +    D
Sbjct: 92  VAKLKEQGISKSDLSREEFLAHAWEWKNEYGGVILEQLKKLGCSCDWDRTAFTMDPTLSD 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +   ++  + +KG IY+G     +        +D+EV  
Sbjct: 152 SVIKVFVDLFNKGLIYRGNRMVNWDPEALTTLSDEEVIY 190


>gi|325288845|ref|YP_004265026.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 924

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 138/402 (34%), Gaps = 42/402 (10%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRL 169
           +    D  K  Y   +  ++   +   ++ +   DG       + + V+W+   G     
Sbjct: 382 MLIHQDKIKHSYPHCWRCKNPIIFRATEQWFASIDGFRQAALEEIDRVEWIPAWGKDRIY 441

Query: 170 SAYQDKLLSYYESHPEFILPI------------------------ERRNEVISFVKSGLK 205
           +   D+          + +PI                         R+    ++    ++
Sbjct: 442 NMIADRGDWCISRQRTWGVPIPIFYCEDCGKEIINEQTIEKLQEIFRQEGSDAWFAHSVE 501

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           +L         G         IM VW D+ T+++                +PAD+++ G 
Sbjct: 502 ELLPEGLKCQCGGTEFRKETDIMDVWFDSGTSHVGVLKLRP------ELSYPADMYLEGS 555

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F++    +       P    +     +  KG K+SKS GN +DP++V+ ++G D
Sbjct: 556 DQHRGWFNSSLSTSVAAYGQAPYKTVLTHGFLVDEKGRKMSKSQGNGVDPLQVVRDMGAD 615

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGA 382
            LR ++        D       + +    +    I N +   +  +   + +        
Sbjct: 616 ILRLWV-SSADYRNDVAASPRIMNQ--MVEAYRKIRNTLRFLLGNLYDFNPEQDRVEYSK 672

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTN 440
             E D  +L+  +RV++++ +  +    H     V +  + E+   Y D  K     +  
Sbjct: 673 LQEIDRWVLTRLARVIEKVIKAYETYEFHVVYHTVHNFCTVELSAIYLDIVKDRAYVEGK 732

Query: 441 PDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 +   V  E++  L  LL   +   A++I+  +  AD
Sbjct: 733 ESLLRRSAQTVMNEILNALVRLLAPILVFTADEIWAYIPGAD 774



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   ++ D++ RF  + G D  +  G D HG  I + 
Sbjct: 45  RGRRKFILHDGPPYANGDIHLGHALNKVLKDIIIRFKTMQGYDAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                  +  +     +     L +  ++D+   T  K +    
Sbjct: 105 VIKKLGLNRHAVSTLEFRARCSDYAKEYVEIQKAEFKRLGVRGNWDNAYLTLHKEYEAAQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IYKG    ++    E    + E+              PV
Sbjct: 165 IGVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIDYADKKSTAIFVKFPV 215


>gi|171920420|ref|ZP_02931738.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|186701743|ref|ZP_02971430.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|171902863|gb|EDT49152.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|186701013|gb|EDU19295.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 806

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 115/349 (32%), Gaps = 61/349 (17%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVISFVKSGLKDLS 208
             V   +   + F    Y  +                 LP+   N +     K+G   L+
Sbjct: 407 KKVANYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLDEFKPSKTGESPLA 466

Query: 209 LSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYLDNPDGSKAKF 255
            ++      I  K        M  W    + Y             T    +      AK+
Sbjct: 467 NAQDWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNSEEAKQRFAKW 525

Query: 256 WPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G++    H +Y   +         +S   P  K +     +    EK+SKS 
Sbjct: 526 LPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVSTKEPFYKVINQGMILGENNEKMSKSK 585

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSV 366
           GNVI+P E+I   G D LR + +          +  DGL   R   D    + + +S   
Sbjct: 586 GNVINPDEIIASHGADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLYHNLS--- 642

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
                     +       + +E I+     +++   + +  Q  + A+++++  V+    
Sbjct: 643 ---------ELEVVKDVNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISEMMVFVN---- 689

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                    L K           +  E++    ILL  F P LA +++ 
Sbjct: 690 --------VLYKNK--------VINYELLDNFLILLSCFAPHLAEELYS 722


>gi|21105441|gb|AAM34664.1|AF506220_1 valyl-tRNA synthetase [Danio rerio]
          Length = 505

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 104/306 (33%), Gaps = 51/306 (16%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
           I +  D   ++  W  +     +  G+ +  +  +  F+P  L   G DIL F    +  
Sbjct: 16  ISLRQDED-VLDTWFSSGIFPFSIFGWPNESEDLRV-FYPGTLLETGHDILFFWVARMVM 73

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------ 317
               L+  LP  +           G K+SKSLGNVIDP++VI                  
Sbjct: 74  MGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLADSNLD 133

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ L    + G+D   D + +         N +
Sbjct: 134 PLEIEKAKQGQKSDYPTGIPECGTDALRFALCAYPSQGRDINLDVNRILG--YRHFCNKL 191

Query: 359 GNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            N V  ++  + + +         G+ + SD  ILS  S  +       +          
Sbjct: 192 WNAVKFAMRTLGEGFVPCEKAQLCGSESVSDRWILSRLSAAVALCDGGFKAYDFPTITTA 251

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLAN 471
           + +       D Y +  KP    +T+ +   +A          +     LL   +P ++ 
Sbjct: 252 IYNFWLYELCDVYLECVKP-VFSRTDSEGQKQADVCRQTLYTCLEVGLRLLSPIMPFVSE 310

Query: 472 KIFDIL 477
           ++F  L
Sbjct: 311 ELFQRL 316


>gi|165975502|ref|YP_001651095.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|165875603|gb|ABY68651.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 922

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 382 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 441

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 442 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 501

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 502 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 556

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 557 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 616

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 617 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 670 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 730 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 763



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 90  VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 150 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 186


>gi|32033773|ref|ZP_00134058.1| COG0060: Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247020|ref|ZP_07529074.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306856472|gb|EFM88621.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 922

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 382 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 441

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 442 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 501

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 502 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 556

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 557 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 616

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 617 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 669

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 670 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 729

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 730 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 763



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 90  VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 150 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 186


>gi|293377848|ref|ZP_06624032.1| putative leucyl-tRNA synthetase [Enterococcus faecium PC4.1]
 gi|292643532|gb|EFF61658.1| putative leucyl-tRNA synthetase [Enterococcus faecium PC4.1]
          Length = 486

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+ K Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 29  EKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRVKRSQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTQKNIETFRRQINSLGFSYDWNREVNTTDPEYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV    DG+     ++ V+      +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWVPELGTVISNEEV---IDGKSERGGYDVVRKP-MRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205


>gi|168185547|ref|ZP_02620182.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296223|gb|EDS78356.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 812

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 86/231 (37%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY+    +YP+A + H GH +     D  ARF +++G +V    G D  G      A 
Sbjct: 31  EKLYVLEMFSYPSAAKLHAGHWFNYGPTDSWARFKKMNGYNVFQPMGFDAFGLPAENFAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    +N  N  +    +    ++D  I T    ++   + ++ K+ +KG  Y+
Sbjct: 91  KTGIHPQDSTMKNIENMEEQLRSMGAMFNWDHEIVTCLPDYYKWTQWVFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V+      +F +++ Y D+LL   +
Sbjct: 151 KNAPVNWCPSCNTVLANEQVLDGH----CERCDSLVEKKALTQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVISFVK--SGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                      +   I   K       +  S  TFD      D    + YV
Sbjct: 207 ELDWPEKTKAMQKHWIGKSKGVEATFKVDNSDITFDVFTTRVDTLNGVTYV 257



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 109/339 (32%), Gaps = 35/339 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     P+ + ++ G            L Y             ++E            
Sbjct: 418 QRYWGAPIPIVYCDKCGTVAIPEEQLPIKLPYNIEFTPDGKSPLSKSEEFLHTTCPKCGG 477

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+T      +     Y+ YV                       K  P D +V G + 
Sbjct: 478 HAIRETDTLDTFVCSSWYYLRYV--------DNNNSEKAFDTDKVNKMLPVDKYVGGPEH 529

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G K+SKS GN I P + I+E
Sbjct: 530 ACMHLLYARFITKALRDMGYLNFDEPFKSLTHQGLILGPDGFKMSKSKGNTIAPDDYIKE 589

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  D +K            + V R ++   ++ +    T
Sbjct: 590 YGADVFRMYLMFGFAYSEGGAWSDDAIKS------MGKFIDKVERILTDAREELNNSKNT 643

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                +S++ +       +Q + E+      + A+A+++   + + +Y + +    L   
Sbjct: 644 KTTMEKSEKELNYARHYAIQHVTEDTDKFQFNTAIARIMEYTNSLSKYLNEE---NLN-- 698

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   +    E +     LL  F P  + + +++L 
Sbjct: 699 --------IEFLKEALIDYVKLLSPFAPHFSEEQWELLG 729


>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 910

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ T++             +   +PADL++ G D     F++    + 
Sbjct: 518 FTKEMDIMDVWFDSGTSHQGCCA------IREDLTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + V +   +   G K+SKSLGNVI P +V +E+G + +R +    +   +D
Sbjct: 572 AVSGVAPYKELVSAGFVMDGNGNKMSKSLGNVISPNDVGKELGAEIIRLW-SASVDYTQD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCS 395
               KD LK+   ++    I N     +  +     +    +       E D+ ++    
Sbjct: 631 VRISKDILKQV--SETYRKIRNTFRFLLGNLYNGSFNNKTDLVAYENLEELDKYMVLKFE 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRASTVLYVTV 452
           +V+ ++ +  +N   +    ++I+   V     Y D  K    ++  +  +  ++L V  
Sbjct: 689 KVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIEGEDSHKRQSMLTVLY 748

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
            V+ +   LL   +   A +++D +   D
Sbjct: 749 TVLSKSVRLLAPILSFTAEEVYDNMPYED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +  
Sbjct: 47  GKPSYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSPYVPGWDTHGLPIEQVL 106

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
            N GV              K +  +     R     L +   +D+   T + +       
Sbjct: 107 VNNGVDRKSMPANKFRNKCKDYALKQVDKQRADFKKLGVLGDWDNPYLTLDPKFEAEQIR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++ K+ DKG IYKG    ++S   E+   + E+   
Sbjct: 167 VFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYH 202


>gi|325847822|ref|ZP_08170044.1| leucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480840|gb|EGC83893.1| leucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 802

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +++K Y      YP+ Q  H+GH       D++AR  RL+G +V++  G D  G     
Sbjct: 29  TDKKKFYPLVEFPYPSGQGLHVGHPRPYTALDIVARKRRLEGENVIYPMGWDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A    +   +    N +NF+     +  S+D    + TT+  ++   + ++ ++   G 
Sbjct: 89  YAIKNHIHPSIVTKDNIKNFKGQMKSIGFSFDWSKEVNTTDPNYYKWTQWIFIQLYKHGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK      +    +    ++EV  G          + V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEMPVNWCPSCKVGLANEEVVDGK----CERCGSEVTHKVKNQWMLKITEYADRLID 204

Query: 179 YYESHPEFILPIERRNEVI 197
             +          ++   I
Sbjct: 205 DLDEVDYEEKIKTQQKNWI 223



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 117/359 (32%), Gaps = 65/359 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +  +  N        +       G   LS   
Sbjct: 414 YKLRDWVFSRQRYWGEPIPMIYCEEHGWVAEKEENLPIKLPDVDSYEVTDDGESPLSKID 473

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVI 263
           +  +    I   P       M  W  +   YL      +N D         + P D +  
Sbjct: 474 EFVNTTCPICGKPAKRETDTMPQWAGSSWYYLRYIDPNNNEDLASKEKLDYYTPVDWYNG 533

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  K+      +    +K+SKS GNV++P +
Sbjct: 534 GMEHTTLHLLYSRFWHKFLYDLGKVPTKEPYKKRTSHGMILGEDHQKMSKSRGNVVNPDD 593

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILKDYD 374
           ++ + G D LR + +          +  +G+K  R   +    + +LV            
Sbjct: 594 IVRDYGADTLRAYEMFIGDFRSTAPWSDEGVKGCRKYLERVFNLYDLV------------ 641

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                     E  + +  + ++ ++++ E+ ++   + A+A ++SL++E           
Sbjct: 642 ------EDGDEYTKELEILINQTIKKVSEDYESLKYNTAIAALMSLLNE----------- 684

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
                       +  +T +  +   ILL    P L  ++++ +    +     +   D+
Sbjct: 685 ---------MRNIGKITKKDYKTYLILLNPVAPHLTEELWEEIGFEGQLNQTSWPEYDE 734


>gi|159480322|ref|XP_001698233.1| hypothetical protein CHLREDRAFT_139213 [Chlamydomonas reinhardtii]
 gi|158273731|gb|EDO99518.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1177

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 70/477 (14%), Positives = 146/477 (30%), Gaps = 33/477 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               D +G+   +  Q  G+  K    +     ++   +++      SY    R+     
Sbjct: 372 PCPVDLNGRFTEEVGQFKGLYVKDADKEIVAVIKEAGRLVEAGSLTHSYPFCWRSDTPLI 431

Query: 103 HDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      +    +            Y     ++++ ++N  E               P+ 
Sbjct: 432 YRAVPSWFVKVEEIKERLLHNNTLTYWVPAYVKEKRFHNWLENAHDWAVSRSRFWGTPI- 490

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
                        +  +                R  E ++ +     D  L+  +   G 
Sbjct: 491 -----------PIWASEDGEEIVVIGSKEELERRTGEKVTDLHRHFID-HLTIPSSRPGQ 538

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPA 277
                   +   W ++ +       Y           +PAD    G D  R +       
Sbjct: 539 PPLKRVDDVFDCWFESGSMPYGQLHYPFENKELFENNFPADFVAEGLDQTRGWFYTLMVL 598

Query: 278 FLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                + P  K +  +G +L   G+K+SK L N  DP EV+++ G DALR +L+      
Sbjct: 599 STALFDKPAFKHLVCNGLVLAADGKKMSKRLKNYPDPTEVLDKYGADALRLYLINSPVVR 658

Query: 337 KDG-FYDKDG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDE 388
            +   + ++G   + K V     N    LV   + M  +     +P P          D 
Sbjct: 659 AETLRFKEEGVFAVVKDVFLPWYNAYRFLVQNILRMEGESGAKFVPVPPEQLQPTNVLDR 718

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTV 447
            I +    ++  +   M    ++  +  ++  +    + Y    +         +  ST 
Sbjct: 719 WIGAASRSLIAYVAAEMGAYRLYTVVPYLVKFIDSLTNVYVRYNRKRLKGAKGAEDTSTC 778

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           L     V+  +  ++  F P L   ++  L  A      +S+     P     ++ D
Sbjct: 779 LSCLFNVLLDVCKVMAPFTPFLTESMYQNLRTALPAGAPESVHWCDFPATRAAQSGD 835



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +    PH GH     + D++ R+    G  V    G D HG  +   
Sbjct: 39  EGKPEYIFYDGPPFATGLPHYGHILAGTLKDIVTRYASATGHHVTRRFGWDCHGLPVEYE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S+ +      L   I +++  +T +   
Sbjct: 99  IDKKLNIKSRDDVMKMGIGAYNEECRSIVMRYSKEWEKTVKRLGRWIDFENDYKTLDPSF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++ ++ +KG +Y+G     +S       ++ E
Sbjct: 159 MESVWWVFSRLFEKGLVYRGFKVMPFSTACSTPLSNFE 196


>gi|260654882|ref|ZP_05860370.1| leucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630384|gb|EEX48578.1| leucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 836

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+    H+GH       D+  R+ R++G +VL   G D  G      A 
Sbjct: 34  KRRYVLDMFPYPSGAGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGFDSFGLPAENYAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   +V  + N   FR     L   YD    + T +  ++   + L+ ++  KG  Y+
Sbjct: 94  KTGTHPRVTTEANINRFRQQIKSLGFCYDWSREVATHQPEYYRWTQWLFLQMYRKGLAYE 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         ++EV +G          + V       +  +++ Y ++LL   +
Sbjct: 154 AETPINWCPSCMTGLANEEVKEGH----CERCGSHVVRRNMRQWVLKITEYAERLLQDVD 209

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 210 KLDWPEAIKAMQRNWI 225



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 85/321 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      YL      +        +W P DL+V G +    H +Y   +    
Sbjct: 494 PQWAGSCW--YYLRYLDPRNEKEFASKEAIDYWMPVDLYVGGAEHAVLHLLYARFWHKVF 551

Query: 280 -----LSANLPLPKKVFSHGFILHKGE--------------------------------- 301
                ++ + P  + V       +  +                                 
Sbjct: 552 FDLGLVNTDEPFSRLVNQGMITSYAYQRPNKTLVPTDEVEETAPDRFVERATGEPLERVI 611

Query: 302 -KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSL NVI+P +VI + G D LR + +          +   G+          G+  
Sbjct: 612 AKMSKSLKNVINPDDVIRDHGADTLRLYEMFMGPLQMSKPWSTQGV---------AGVQR 662

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +      K        P      D     +  + +Q++ ++ ++   + A+AQ+++L
Sbjct: 663 FLEKVCRYASK--------PLTDRPLDAETAKLLHKTIQKVSDDTESLNFNTAIAQMMTL 714

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++EV R                          +V+    +LL  + P LA +++  +   
Sbjct: 715 INEVSR--------------------ADDCPRQVLEPFTLLLAPYAPHLAEELWSTVLGN 754

Query: 481 D---ENRCFQSLDQRLKPGFM 498
           +    ++ +   DQ L     
Sbjct: 755 EPSVADQPWPKHDQSLTAETT 775


>gi|126459216|ref|YP_001055494.1| isoleucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248937|gb|ABO08028.1| Isoleucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 977

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 116/309 (37%), Gaps = 12/309 (3%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            +   K   +    S               Y+M VW+D+   ++      +       + 
Sbjct: 493 PVDDFKLVHRPWIDSVVLKTEDCDEWAREPYVMDVWLDSGVAWIAAVD-GERNRELWTQL 551

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D    G D     F+++   + L +   P    +     +   G+K+SKS GNV+  
Sbjct: 552 FPYDFVTEGIDQTRGWFYSLLATSVLYTGKAPYKTILIQGLILDKHGQKMSKSKGNVVWA 611

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKD 372
            ++ E+ G D +R +++ + A  +D  +D D +K  ++    N + N+V  +   M L  
Sbjct: 612 KDLFEKYGADPVRLYILSKAAPWEDLAFDPDEVKHVISD--LNILWNVVKFADTYMSLDG 669

Query: 373 YDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DR 426
           +         +     E D+ +LS  + +  +++E ++N   H+A       V E    R
Sbjct: 670 FSKDKYPLEEWLNKALEEDKWLLSELNLLTIKVKEYLRNFEFHKAANLWREFVVETLSHR 729

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y    +     + +         V   V++ + I+   FVP     ++       +    
Sbjct: 730 YIRLLRRRVWLEESTPDKYAAYSVLFHVLKNVLIIGSVFVPFATEYLWQAFVRKYDKEAE 789

Query: 487 QSLDQRLKP 495
           +S+     P
Sbjct: 790 ESVHLAKYP 798



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 51/162 (31%), Gaps = 20/162 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  PH+GH       DV+ RFHRL G DV    G D  G  +    + 
Sbjct: 41  PRFTFLEGPPTTNGMPHVGHIRGRTYKDVVLRFHRLLGYDVWVQGGWDMQGMPVEWEVEK 100

Query: 65  --AGVTTKVFVDQNSRNFR-----------DMADVLD-------ISYDDFIRTTEKRHHD 104
                + K         F            +             +  D+   T +  + +
Sbjct: 101 RLKLRSKKDIEKYGLEKFALACNALVDEYLEQWKEWGTRRLGLWLDLDNAYETRKPNYLE 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
               + KK  + G + +     W+  R E   +D EV  G +
Sbjct: 161 YAWRIVKKAHEMGLLTEDYRVLWFCPRCETSLSDHEVALGYE 202


>gi|307249243|ref|ZP_07531240.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306858767|gb|EFM90826.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 938

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 518 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 779



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 106 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|149028029|gb|EDL83480.1| rCG38382, isoform CRA_a [Rattus norvegicus]
          Length = 873

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 116/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +++   N   W      ++        +  +  + P    P  R            
Sbjct: 314 HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 373

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 374 EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 431

Query: 265 KDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIE---- 318
            DIL F         L     LP ++V+ H  +    G K+SKSLGNVIDP++VI     
Sbjct: 432 HDILFFWVARMVMLGLKLTEKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 491

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L    + G+D   D + 
Sbjct: 492 QGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 551

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 552 ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSKPEGHESLVDRWIRSRLAEAVRLSNE 609

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 610 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAADCARQTLYTCLDVGLRL 668

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 669 LSPFMPFVTEELFQRL 684


>gi|126207532|ref|YP_001052757.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|303251867|ref|ZP_07338038.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307260496|ref|ZP_07542190.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|166228632|sp|A3MYB6|SYI_ACTP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126096324|gb|ABN73152.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302649297|gb|EFL79482.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|306869808|gb|EFN01591.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 938

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 518 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 779



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 106 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|224476848|ref|YP_002634454.1| leucyl-tRNA synthetase (fragment 1) [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421455|emb|CAL28269.1| truncated leucyl-tRNA synthetase (fragment 1) [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 341

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+    H+GH       D+++R+ R+ G +VL   G D  G    + 
Sbjct: 29  GQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   + F +QN + F+     L  SY  D  + TT+  ++   + ++ ++ +KG  
Sbjct: 89  ALNTGNNPREFTNQNIQTFKRQIQELGFSYDWDREVNTTDPDYYKWTQWIFIQLYNKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y    +  +    +A  +++EV  G           PV       +  +++ Y D+LL  
Sbjct: 149 YVDEVAVNWCPELKAVLSNEEVVDG----VSERGGYPVYRRPMRQWVLKITEYADRLLED 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 205 LDDLDWPESIKDMQRNWIGRSE 226


>gi|327266386|ref|XP_003217987.1| PREDICTED: valyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 983

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 108/305 (35%), Gaps = 48/305 (15%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +        G+  N +  K +F+P  L   G D+L F    +      L+  L
Sbjct: 502 VLDTWFSSGLFPFAALGWPHNTEDLK-QFYPNGLLETGSDLLFFWVARMVMLGKQLTGEL 560

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-------------------------- 318
           P  +           G K+SKSLGNVIDP++VI                           
Sbjct: 561 PFSQVFLHTMVRDAHGRKMSKSLGNVIDPLDVIHGAPLQILQEKLRSSNLDPREVAIAVE 620

Query: 319 -----------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
                      E G DALR+ L    A G     D   ++        N + N +  +++
Sbjct: 621 GQRRDFPQGIPECGTDALRFALCTYFAQGNGINLDVATVENANR--FCNKVWNALKFTLA 678

Query: 368 MILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEV 424
            + + ++ + P      +  D+ ILS C     +     +   +H   + V    L    
Sbjct: 679 ALGEGFNPLDPEEVFPNSPMDKWILSRCYHTAVDCAHWFEKYELHSVASSVHLFWLCDFC 738

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
           D Y ++ KP  L+  +P R           +     LL  F+P L  +++  L     +R
Sbjct: 739 DVYLESVKP-ILRSGDPTRLLVTRQTLYSSVDVALRLLSPFMPFLTEELWQRL--PKTSR 795

Query: 485 CFQSL 489
              S+
Sbjct: 796 SPPSI 800



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ E   +S          H+GHA  + I D L R+ R+ G  VL+  G+D  G      
Sbjct: 54  QKPETFSLSIPPPNVTGSLHLGHALTVAIEDALVRWKRMQGYKVLWVPGSDHAGIATQVV 113

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +      +                  + ++          V+  S  +D    T + R 
Sbjct: 114 VEKKIWKEQGVRRKELTREAFLQEIWNWKEEKGNEIFQQLKVMGASLDWDRVCFTMDSRF 173

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
                  + ++ ++G +Y+      +S 
Sbjct: 174 SQAVTEAFVRLHEQGLVYRDRRLVNWSC 201


>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 930

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 95/277 (34%), Gaps = 17/277 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G         I+ VW D+  ++       D  D       PADL++ G D     F
Sbjct: 517 CPSCGHDHFTKESDILDVWFDSGVSHAAVVENRDYLDS------PADLYLEGSDQHRGWF 570

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+    A       P    +     +   G K+SKS GNV+ P  VI + G + LR ++ 
Sbjct: 571 HSSLLAAVGTRGVAPYKAVLTHGFVVDGNGRKMSKSQGNVVAPDAVINKFGAEVLRLWVA 630

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDE 388
            +     D    ++ L++   +D    I N     +S I  D+D        G   E D 
Sbjct: 631 AQDYQ-DDIRISQEILQRL--SDAYRRIRNTARYILSNIY-DFDPATDSVADGDLLELDR 686

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRAS 445
             LS    ++  + +   +   H     V +  S      Y D  K        N     
Sbjct: 687 WALSRLESLVGRVEKAYNDYEFHMLYHAVHNFCSVELSSIYLDILKDRVYTAAPNSVARR 746

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +       ++  L  L+   +   A++I+  +    E
Sbjct: 747 SAQTAMYRILDALTRLIAPVLSFTADEIWAQMPGERE 783



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 19/158 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  +     Y N   HIGHA   I+ D++ +  R+ G DV +  G D HG  I    
Sbjct: 46  GRPRFTLHDGPPYANGHTHIGHALNKILKDIVLKSRRMQGFDVPYVPGWDCHGLPIELMV 105

Query: 63  QNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
                  K                  +VD  +  F+ +    +   D ++   +     T
Sbjct: 106 DKKLGKKKRDMTKAEIRRECRNYATEWVDTQASEFKRLGIFGEWD-DPYLTMHDSYEAAT 164

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            R L +     G  YKG     +         + EV  
Sbjct: 165 ARELARFAERGGL-YKGKKPVHWCSSCVTALAEAEVEY 201


>gi|317496755|ref|ZP_07955085.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895767|gb|EFV17919.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 803

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKLLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +N +   + +     +D  + TT+   +   + ++ K+  KG  
Sbjct: 89  AIKMGTHPRISTEANIKNIKRQINEISAIYDWDMEVNTTDPEFYKWTQWIFVKMFKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGK----CERCGADVTKKNLRQWMLKITAYADRLLAD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 205 LDKLDWPEKVKKMQAEWI 222



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 110/303 (36%), Gaps = 49/303 (16%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDN 247
           E      +G   L+      +    +           M  W         Y+      + 
Sbjct: 457 EKYEPTGTGESPLADIEDWVNCKCPVCGKDAKRETNTMPQWAGSSWYFLRYIDNKNNEEL 516

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH 298
               KA  + P D+++ G +    H +Y   +         +  + P  K          
Sbjct: 517 VSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGVIDFDEPFHKLFNQGMITGK 576

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+         +G+
Sbjct: 577 NGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDESGI---------DGV 627

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R   +++   D  +       E+D+ +L V  +++ +I   + N  ++  ++  +
Sbjct: 628 HRFLTRFYKLVMDQKDKGV-------EADKELLKVRHKLIYDITTRLNNFSLNTVVSGFM 680

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +       A      KK+  D+         E +    +LL  F P +A ++++ + 
Sbjct: 681 EYTNT----LTAMA----KKSGVDK---------ETLETAIVLLAPFAPHIAEELWEAMG 723

Query: 479 VAD 481
             D
Sbjct: 724 HED 726


>gi|291559263|emb|CBL38063.1| leucyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 803

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+  L+G  V+   G D  G      
Sbjct: 29  KKPKYYCLDMFPYPSGSGLHVGHWRGYVISDVWSRYKLLNGYYVIHPMGWDAFGLPAENY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +N +   + +     +D  + TT+   +   + ++ K+  KG  
Sbjct: 89  AIKMGTHPRISTEANIKNIKRQINEISAIYDWDMEVNTTDPEFYKWTQWIFVKMFKKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 149 YEKQMPINWCPSCKTGLANEEVVNGK----CERCGADVTKKNLRQWMLKITAYADRLLAD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 205 LDKLDWPEKVKKMQAEWI 222



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 49/303 (16%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDN 247
           E      +G   L+      +    +           M  W         Y+      + 
Sbjct: 457 EKYEPTGTGESPLADIEDWVNCKCPVCGKDAKRETNTMPQWAGSSWYFLRYIDNKNNEEL 516

Query: 248 PDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILH 298
               KA  + P D+++ G +    H +Y   +         +  + P  K          
Sbjct: 517 VSREKADKYLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGVIDFDEPFHKLFNQGMITGK 576

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
            G K+SKS GNV+ P +++ + G D+LR + +       D  +D+ G+         +G+
Sbjct: 577 NGIKMSKSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDESGI---------DGV 627

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              ++R   +I+   D  +       E+D+ +L V  +++ +I   + N  ++  ++  +
Sbjct: 628 HRFLTRFYKLIMDQKDKGV-------EADKELLKVRHKLIYDITTRLNNFSLNTVVSGFM 680

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +       A      KK+  D+         E +    +LL  F P +A ++++ + 
Sbjct: 681 EYTNT----LTAMA----KKSGVDK---------ETLETAIVLLAPFAPHIAEELWEAMG 723

Query: 479 VAD 481
             D
Sbjct: 724 HED 726


>gi|269836370|ref|YP_003318598.1| isoleucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785633|gb|ACZ37776.1| isoleucyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 1060

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/411 (16%), Positives = 133/411 (32%), Gaps = 37/411 (9%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NPVQWMEEEGYFFRLS 170
           +           + W    D  +   +E Y   D            V+W+ E G    L 
Sbjct: 378 LYHAYAHTHRYPTCWRCGTDLVFRLVEEWYIAVDPWREQIMEVAKTVRWIPEFGLERELD 437

Query: 171 AYQDKLLSYYESHPEFIL--PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ--- 225
             ++           + L  PI   +    F   G +     R    W       P    
Sbjct: 438 WLRNMDDWMISKKRYWGLALPIWTCDACGWFDVIGSETELKERAVAGWQEFEGHTPHRPW 497

Query: 226 -------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI--- 263
                               +   W+DA     +T  Y  + +  + +++PAD       
Sbjct: 498 IDAVKIRCEQCGEIASRIPDVGNPWLDAGIVPFSTLRYRHDREYWR-EWFPADFITESFP 556

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           G+    F+++   + +L    P    +        +GE++ KS GN I   +  E +G D
Sbjct: 557 GQFRNWFYSLLAQSTVLVGQAPFRTVLGFATLRDERGEEMHKSKGNAIWFDDAAERMGAD 616

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--G 381
            +R +L  +    ++  +      +     +     +    +    L  ++         
Sbjct: 617 VMR-WLYLKHNPAQNLNFGFSLGDEARRQFILPLWNSYAFFANYAALDGFNPAEHDVPLA 675

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT 439
             T  D  ILS    V++ +R+ + +     A   +   V     + Y    +     KT
Sbjct: 676 ERTLLDRWILSRLQEVVRVVRDRLSDYDSLNAARAIEEFVVEDLSNWYIRRNR-RRFWKT 734

Query: 440 NPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             DR     Y+T+ EV+  +  LL  F+P +   ++  L ++ +    +S+
Sbjct: 735 ESDRDKAAAYLTLHEVLVTVTKLLAPFLPFMTEVMYRNLVLSVDPSAPESV 785



 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 21/165 (12%)

Query: 2   KEREKL-YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +++  +I   I   N    + HA+     D+  RFH + G    +  G D  G  +  
Sbjct: 37  KSKKRWSFIDGPIT-ANNPMGVHHAWGRTYKDLYQRFHTMLGERQRYQNGFDCQGLWVEV 95

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
             +                       K  V + +    + +  L   + +D+   T    
Sbjct: 96  EVEKELGFTSKQDIEAYGIARFVEKCKERVWKYAAVQTEQSKRLGYFMDWDNSYYTMSDE 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++       K   ++G IY+G     +  R     ++ EV +G  
Sbjct: 156 NNYMIWHFLKVCHERGWIYRGADVMPWCPRCATGLSEMEVSEGYQ 200


>gi|71894019|ref|YP_279465.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|90101532|sp|Q4A917|SYV_MYCHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71852146|gb|AAZ44754.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 822

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 142/345 (41%), Gaps = 46/345 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +++  +F ++      L+S+  S  +     +   + +      + D ++SR+   W
Sbjct: 347 VEILKKPQWFVKMDELAKSLISHLNSKDKIKFYPKNFEKNLRKWFEKIHDWTISRQ-LWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G +I                       + ++  W  +  +     G+  N D  K+ ++P
Sbjct: 406 GHRIPVWCKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQNFDLIKS-YFP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             L V G DIL F    +Y+ +  +    P  K +         G K+SKSLGN +DP+E
Sbjct: 465 TSLLVTGWDILFFWVARMYFSSLFIMKQKPFEKVLLHGLIRDEIGRKMSKSLGNGLDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+        + D D 
Sbjct: 525 IIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNIAKY-----IADLDT 577

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
               P      D  + +    + ++I +N++         ++ + +      RY +    
Sbjct: 578 FFAKPD---LIDLWMENKIYILKRQIVKNIKKYNFSVIGTEINNFIYGDFSSRYIE---- 630

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             L KT  +      +   +++R++ I+L  F+P L + + + +F
Sbjct: 631 --LIKTRKN-----GFYARKLLRKVLIILHPFLPFLTDFLMEKIF 668



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I +       Q H+GH++   I D L R+H+L G DVL     D  G      
Sbjct: 29  QTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVDHAGIATQVK 88

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        + ++     ++  D L I YD     F  T ++ 
Sbjct: 89  VEEDLAKKGIKKSDLKREEFIKKCYHWKEKQYLKIKEQWDKLGICYDFSKERF--TLDQD 146

Query: 102 HHDTCRILWKKISDKGDIYK 121
                   + K+ +K  IY+
Sbjct: 147 AQIAVSDFFIKLWEKNLIYR 166


>gi|72080999|ref|YP_288057.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|90101531|sp|Q4A755|SYV_MYCH7 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71914123|gb|AAZ54034.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 822

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 142/345 (41%), Gaps = 46/345 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +++  +F ++      L+S+  S  +     +   + +      + D ++SR+   W
Sbjct: 347 VEILKKPQWFVKMDELAKSLISHLNSKDKIKFYPKNFEKNLRKWFEKIHDWTISRQ-LWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G +I                       + ++  W  +  +     G+  N D  K+ ++P
Sbjct: 406 GHRIPVWCKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQNFDLIKS-YFP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             L V G DIL F    +Y+ +  +    P  K +         G K+SKSLGN +DP+E
Sbjct: 465 TSLLVTGWDILFFWVARMYFSSLFIMKQKPFEKVLLHGLIRDEIGRKMSKSLGNGLDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+        + D D 
Sbjct: 525 IIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNIAKY-----IADLDT 577

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
               P      D  + +    + ++I +N++         ++ + +      RY +    
Sbjct: 578 FFAKPD---LIDLWMENKIYILKRQIVKNIKKYNFSVIGTEINNFIYGDFSSRYIE---- 630

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             L KT  +      +   +++R++ I+L  F+P L + + + +F
Sbjct: 631 --LIKTRKN-----GFYARKLLRKVLIILHPFLPFLTDFLMEKIF 668



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I +       Q H+GH++   I D L R+H+L G DVL     D  G      
Sbjct: 29  QTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVDHAGIATQVK 88

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        + ++     ++  D L I YD     F  T ++ 
Sbjct: 89  VEEDLAKKGIKKSDLKREEFIKKCYHWKEKQYLKIKEQWDKLGICYDFSKERF--TLDQD 146

Query: 102 HHDTCRILWKKISDKGDIYK 121
                   + K+ +K  IY+
Sbjct: 147 AQIAVSDFFIKLWEKNLIYR 166


>gi|307244845|ref|ZP_07526944.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307253799|ref|ZP_07535653.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258255|ref|ZP_07539998.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306854290|gb|EFM86496.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306863283|gb|EFM95223.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867715|gb|EFM99560.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 938

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 518 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 779



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 106 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|156083837|ref|XP_001609402.1| leucyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796653|gb|EDO05834.1| leucyl-tRNA synthetase, putative [Babesia bovis]
          Length = 782

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 13/239 (5%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E  K Y    I YP+ +  H+GH       DV+ R+ R+ G  VL   G D  G    
Sbjct: 106 MPECPKFYGLCMIPYPSGEGLHVGHLLGYTALDVVCRYKRMQGYQVLCPIGWDSFGLPAE 165

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
           + A++ G   K    +N   F+     +  ++D    + T++  ++   + ++++    G
Sbjct: 166 RYAESVGRDVKQVTLENIARFKHQLKRMGFAFDWSRELATSDPGYYKWTQWMFQEFYRSG 225

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y+      +         ++EV  G   +       PV     + +  R+S Y  +LL
Sbjct: 226 IAYRANQLVNWCPDLGTVLANEEVRNGLSARGGF----PVYRKNAQQWLLRISQYAQRLL 281

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
              ++       I+ + + I   K     L ++      G     DP Y+    +D LT
Sbjct: 282 DGLDALDWPQSIIDAQKKWIGIEKGYKVALRVA------GKPGTMDPLYLFVTDLDLLT 334



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 88/296 (29%), Gaps = 80/296 (27%)

Query: 228 MYVWIDALTNYLTTT---GYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLL--- 280
           M  W  +  +YL            D  KA+ W P DL++ G +    H +Y   +     
Sbjct: 507 MPQWAGSSWHYLRFCDARNQEAPFDRRKAERWMPVDLYIGGTEHAVSHLLYARFWNKLLF 566

Query: 281 -----SANLPLPKKVFSHGFI-----------------LHKGE----------------K 302
                    P  K V                        HKG                 K
Sbjct: 567 DLGLSPVEEPFRKIVLHGIIRSPSFSIGSTPVDADKVTKHKGRYVLKHDLDTEVSVKLEK 626

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS  N++ P ++I + G DALR  L+      KD  +   GL          G+  L+
Sbjct: 627 MSKSRNNIVSPDDIIAKFGADALRMHLLFLGPIHKDKVWSDSGLI---------GVARLL 677

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  +              A  +SD     V  + +  I   ++    + A+A    L  
Sbjct: 678 DRITAFF-----RTARVVDAAPKSD----VVIDQYVARITRAIEEYSFNVAIADFFKLFD 728

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               Y                   V    +        LL  F P +A  ++ IL+
Sbjct: 729 ----YI------YDISNGRAIDRGVGGTYI-------KLLAPFAPHIAEDLWHILY 767


>gi|145638215|ref|ZP_01793825.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272544|gb|EDK12451.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751370|gb|ADO81354.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 941

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 150/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L+ L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLELLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +   ++  P
Sbjct: 532 LDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATNSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|258615786|ref|ZP_05713556.1| isoleucyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 795

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 379 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 432

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 433 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 491

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 492 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 545

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 546 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 605

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 606 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 638


>gi|159902802|ref|YP_001550146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|254782425|sp|A9BDK6|SYI_PROM4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|159887978|gb|ABX08192.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 969

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/317 (21%), Positives = 117/317 (36%), Gaps = 34/317 (10%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
               F +S L   SL+ ++  W           M VW D+ ++      +          
Sbjct: 528 IWWEFDESKLLPPSLASESHHW-----QKGVDTMDVWFDSGSS------WASVSCQRDEL 576

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PADL++ G D     F +    +  ++ + P  K +     +   G K+SKSLGN+ID
Sbjct: 577 GYPADLYLEGTDQHRGWFQSSLLTSVAVNGHAPYKKVLTHGFALDENGRKMSKSLGNIID 636

Query: 313 PIEVIEE---------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           P  +I            G D LR ++   +    D     + LK+   +D+   + N  S
Sbjct: 637 PTVIINGGTNKKTDPAYGADVLRLWV-SSVDYSVDVPIGSNILKQL--SDVYRKVRNT-S 692

Query: 364 RSVSMILKDYDGMI--PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL- 420
           R +   L D+D              D+ +L+  + V+ EI    +     R    + S  
Sbjct: 693 RYLLGNLHDFDPKKNSVDIDNLPILDKWMLNRTAEVIDEITLAFEKYEFSRFFQLLQSFC 752

Query: 421 -VSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V   + Y D  K        +  R      V   +I +LA L+   +  +A  I+  + 
Sbjct: 753 TVDLSNFYLDIAKDRLYVSAPDDPRRRACQTVMALIIEKLAGLISPVLCHMAEDIWQNIP 812

Query: 479 VADENRCFQSLDQRLKP 495
                   +S+ +R  P
Sbjct: 813 Y---QLSEESVFKRGWP 826



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
               +     Y N   H+GHA   ++ D++ +FH + G  V F  G D HG  I      
Sbjct: 59  PSFTLHDGPPYANGALHMGHALNKVLKDIINKFHIMRGHKVHFVPGWDCHGLPIELKVLQ 118

Query: 63  -----QNAGVTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                +   +T          +  +  +   +      I  +++    T +K +      
Sbjct: 119 TLSNKERQALTPIQLRKKAAAYASKQVKGQMEGFKRWGIWGNWNKPYLTLQKEYESAQVK 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           L+ ++  KG IY+G     +S        + E+  
Sbjct: 179 LFGQMVLKGYIYRGLKPVHWSPSSRTALAEAELEY 213


>gi|320164486|gb|EFW41385.1| isoleucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1187

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 68/450 (15%), Positives = 148/450 (32%), Gaps = 34/450 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               DE G   ++     G   K       ++ +D+  ++++     SY    R+     
Sbjct: 465 PCPIDEKGCFTSEVTDFVGKYVKDADKDVIKHIKDLGRLVNVASIVHSYPFCWRSNTPLI 524

Query: 103 HDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + ++              Y     ++++ + N     +            P+ 
Sbjct: 525 YRAVGSWFVRVESLIPRLLANNAQTYWVPDVVKEKRFANWLANARDWSISRNRYWGTPIP 584

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +     +     + L          L  E  +++    K G   L  +++      
Sbjct: 585 LWVSDDGKEVVRISSIQELHELSGVLVTDLHREFLDDITIPSKQGKGVLRRTKE------ 638

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                   +   W ++ +       Y      +  + +PAD    G D     F+ +   
Sbjct: 639 --------VFDCWFESGSMPYAQVHYPFERKDTFQQSFPADFIAEGLDQTRGWFYTLLVI 690

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  L    P    + +   +   G+K+SKS  N  DP  VI+  G DALR +L+      
Sbjct: 691 STALFDKPPFKNLIVNGLVLAADGQKMSKSKKNYPDPSLVIDNYGADALRLYLINSPVVR 750

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI--LKDYDGMIPTPGAFTE------SDE 388
            +    K+   K V  D+     N     +  +  LK  DG+  T     E       D+
Sbjct: 751 AEEVKFKEAGVKDVIKDVLLPWYNAFRFCLQNVDRLKKEDGIDFTFDLKAENPTTNLMDK 810

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTV 447
            IL+    ++  +++ M    ++  + ++++ +  + + Y    +     +   +     
Sbjct: 811 WILAYTQSLITFVKQEMAAYRLYTVVPRLLAYIDNLTNWYVRFNRRRVKGEAGLEECKNS 870

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L    EV+     L+  F P +A  ++  L
Sbjct: 871 LGALFEVLFTTVTLMAPFTPFIAEYMYQNL 900



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 50/184 (27%), Gaps = 47/184 (25%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMII------------------------ADVLARF 37
           + R+         +   +PH GH     I                        +D++ R+
Sbjct: 53  EGRKPYTFYDGPPFATGKPHYGHILAGTIKARALTLTSLAHSISSLACVDLAASDIVTRW 112

Query: 38  HRLDGLDVLFTTGTDEHGQKIAKAAQN--AGVTTKV-------------------FVDQN 76
               G  V    G D HG  I           + +                    F  + 
Sbjct: 113 AHQTGHYVERRFGWDTHGLPIEFEIDKAFNINSPQDVEKMGIANYNEKCRNIVMTFAKEW 172

Query: 77  SRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYY 136
                 M   +D   D   +T      ++   ++ ++ DK  +Y+G     +S       
Sbjct: 173 ETTVNRMGRWIDFQNDY--KTMYPSFMESVWWVFSQLFDKDLVYRGYKVMPFSTGCATPL 230

Query: 137 NDDE 140
           ++ E
Sbjct: 231 SNFE 234


>gi|289705662|ref|ZP_06502047.1| valine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557610|gb|EFD50916.1| valine--tRNA ligase [Micrococcus luteus SK58]
          Length = 890

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 65/355 (18%), Positives = 124/355 (34%), Gaps = 16/355 (4%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE----SHPEF 186
           R E      E+    +   +  + N V+ +  +    R   +   +  +Y       P++
Sbjct: 430 RAELIERGREISWHPEHMRHRYE-NWVEGLNGDWLVSRQRFFGVPIPVWYPLDAEGEPDY 488

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             PI   +E +    +       +    D       DP  ++  W  +         +  
Sbjct: 489 ENPILPADEQLPVDPAAEAAPGYAEDQRDVPGGFTGDPD-VLDTWATSSLTPQIVGRWSR 547

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +        +P DL   G DI+     +    A  L+ ++P      S   +    +K+S
Sbjct: 548 DEAF-FNNVFPFDLRPQGHDIIRTWLFSTVVRADALNGSVPWTDTALSGWILDPDRKKMS 606

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++EE G DA+RY+       G D  Y  +  + ++   LA  + N    
Sbjct: 607 KSKGNVVVPTDILEEFGSDAVRYW-ASSARLGADTAY--EVAQMKIGRRLAIKLLNAAKF 663

Query: 365 SVSM-ILKDYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
            +++   +D     P   A      D S+L+  +  +++           RAL    S  
Sbjct: 664 VLNLGATRDAVVRTPEDAARVTNALDASLLARLATTVEQATAAFDAYDYARALNVTESFF 723

Query: 422 S-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
               D Y +  K            ++V+      +  L  LL  F P    +++ 
Sbjct: 724 WQFTDDYVELIKDRAYGGHGEAEQASVVAALATTLDSLLRLLAPFQPFATEEVWS 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 11/129 (8%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DVLAR+ R++G +V +  G D++G    +
Sbjct: 56  TTREQVYSIDTPPPTASGSLHVGHVFSYTQTDVLARYQRMNGKNVFYPMGWDDNGLPTER 115

Query: 61  AAQN------AGVTTKVFVDQNSRN-FRDMADVLDISYDDFIRTTEK---RHHDTCRILW 110
             QN         T  V   +      ++  D   IS  +FI   E+           L+
Sbjct: 116 RVQNYYGVRCDPATPYVEGYRPPEKPAKNQRDWDVISRRNFIELCEELAVEDEKVFEDLF 175

Query: 111 KKISDKGDI 119
            ++    D 
Sbjct: 176 TRLGLSVDW 184


>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
          Length = 930

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 514 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 568 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 626

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 627 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 680

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 681 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 740

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 741 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 773



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 102

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R     L ++ D      T +  +     
Sbjct: 103 LANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQV 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 163 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 198


>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 930

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 514 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 568 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 626

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 627 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 680

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 681 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 740

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 741 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 773



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 102

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R     L ++ D      T +  +     
Sbjct: 103 LANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQV 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++K  IYKG    ++S   E+   + E+  
Sbjct: 163 RVFGKMAEKSYIYKGLKPIYWSPSSESSLAEAEIEY 198


>gi|315185987|gb|EFU19751.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 809

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 3/200 (1%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+A+  H+GH       D+  R+ R+ G  VL   G D  G      A 
Sbjct: 35  KRRYVLDMFPYPSAEGLHVGHPEGYTATDIYCRYLRMRGYQVLHPMGFDSFGLPAEIYAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   ++  ++N   FR     L  SY  D  I T    ++   + ++ K+ + G  Y 
Sbjct: 95  TTGTHPRITTERNINRFRKQIQSLGFSYDWDREIATHRPEYYKWTQWMFLKMYEMGLAYM 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                W+         ++EV +  +G      ++PV       +  R++AY D+LL   +
Sbjct: 155 AEVPVWFCEALGTVLANEEVIQTPEGPRSERGNHPVIRKPLRQWMLRITAYADRLLEGLD 214

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I   +
Sbjct: 215 KLDWPESIKTMQRNWIGRSE 234



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 105/264 (39%), Gaps = 48/264 (18%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      YL      +     K  +W P DL+V G +    H +Y   +    
Sbjct: 503 PQWAGSCW--YYLRYLDPHNDREFASREKIDYWMPVDLYVGGAEHAVLHLLYARFWHKVL 560

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                ++ + P  + V     +   GEK+SKS GNV++P +++EE G D+LR + +    
Sbjct: 561 YDLGLVNTDEPFMRLVNQGMILGEDGEKMSKSRGNVVNPDDIVEEYGADSLRMYEMFMGP 620

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +   GL          G+   ++R   +  ++     P P         +L + 
Sbjct: 621 LEATKPWSTKGLV---------GVHRFLNRVWDISEREITDEEPDPD--------LLKLL 663

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ E+ ++   + A+AQ+++ ++E+ +                    V     E 
Sbjct: 664 HKTIKKVTEDTEHLRFNTAIAQMMTYINEIYK-----------------LERVPRSLWEP 706

Query: 455 IRQLAILLQAFVPKLANKIFDILF 478
                +++  + P +A ++++ L 
Sbjct: 707 F---VLIIAPYAPHIAEEMWEKLG 727


>gi|124028274|ref|YP_001013594.1| isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978968|gb|ABM81249.1| Isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 989

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/432 (15%), Positives = 130/432 (30%), Gaps = 35/432 (8%)

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
              +        R        S   FIR T++        ++          K       
Sbjct: 397 PHEYPFCWRCGTRLFYYA---SRQWFIRITDELRRKMAAEVYSMRWAPSWAAKRMGDWVE 453

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           + RD     +             + ++ V     E    +  A     +      P    
Sbjct: 454 NARDWCISRERYWGTPLPVWRCTSCNHIVVVGSLE--ELKQLATDPNSVPSDPHRPYIDR 511

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
              R  +    +K                        +++ VW+D+   +  +       
Sbjct: 512 VELRCPKCGGVMKR---------------------EPFVVDVWMDSGVAHTASLA-QYGW 549

Query: 249 DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                  +P        D     F+ +     +     P  + +     +   G+K+SKS
Sbjct: 550 LKLWDTLYPYQWITEAADQTRGWFYTLLVTGVVWHERKPYREVLLQGHVLDKYGKKMSKS 609

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS- 365
            GNVI  +E +E+ G D +R FL+   A      +D D +  R      N + N V  + 
Sbjct: 610 KGNVIWALEWMEKNGTDPMRIFLL-SRAPWDSINFDPDEV--RRYQGYLNILWNTVKFAD 666

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             M L  +    P        D  IL    + L++  E +++  +H+A+  ++ LV E  
Sbjct: 667 TYMELDKWKPKNPAEARLAVEDRWILYRLWQALEKASEAIESDNMHQAVQALVDLVVEQV 726

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             RY    +P   ++   +           V+R +   +    P +   ++       E 
Sbjct: 727 SHRYIPLIRPRVWEEEMTESKDAAYATLYYVLRAVLAAMAPIAPFVTEYLYQAFVRKYEP 786

Query: 484 RCFQSLDQRLKP 495
              +S+     P
Sbjct: 787 DAPESIHLNQWP 798



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 19/159 (11%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
                     N   H+GHA    + DV  R+ R+ G  V    G D  G  +    +   
Sbjct: 45  FAFLEGPPTTNGFMHVGHARGRTLKDVKLRYMRMRGYRVWDQAGWDTQGLPVELEVEKKL 104

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
                               +  VD    ++   +  L +  D      T   R+ +   
Sbjct: 105 GLKSKRDIEKLGVERFVEECRKLVDYYMEHWVRASKRLGLWLDYEHAYETRHPRYIEQVW 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              KK  +KG +Y+G        R     +  EV +G +
Sbjct: 165 SFIKKAHEKGLLYEGRRVVPRCPRCGTALSSHEVAQGYE 203


>gi|323304853|gb|EGA58611.1| Vas1p [Saccharomyces cerevisiae FostersB]
          Length = 842

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 138/439 (31%), Gaps = 64/439 (14%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRD--------EAYYNDDEVYKGADGQYY 150
           + R     ++  K +    +  +          D        + + +  E+ K A     
Sbjct: 266 DARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVR 325

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           + Q        E  YF  L   QD  +S                E     +         
Sbjct: 326 DGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRIDGDYWVAG 385

Query: 211 RKT-----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           R              +    +  D   ++  W  +     +T G+ +        F+P  
Sbjct: 386 RSMEEAEKKAAAKYPNSKFTLEQDED-VLDTWFSSGLWPFSTLGWPEKTK-DMETFYPFS 443

Query: 260 LHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEV 316
           +   G DIL F    +      L+ ++P  K+VF H  +   +G K+SKSLGNVIDP++V
Sbjct: 444 MLETGWDILFFWVTRMILLGLKLTGSVPF-KEVFCHSLVRDAQGRKMSKSLGNVIDPLDV 502

Query: 317 IEEVGVDALRYFLVREIACGKDG-----------------------------------FY 341
           I  + +D L   L++     ++                                      
Sbjct: 503 ITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRDI 562

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
           + D L+        N I      ++  +  DY         G  +  ++ IL   +   +
Sbjct: 563 NLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGLSGNESLVEKWILHKLTETSK 622

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            + E +  +    + + +        D Y +  K + +++ +     +       ++   
Sbjct: 623 IVNEALDKRDFLTSTSSIYEFWYLICDVYIENSK-YLIQEGSAIEKKSAKDTLYILLDNA 681

Query: 459 AILLQAFVPKLANKIFDIL 477
             L+  F+P ++ +++  L
Sbjct: 682 LKLIHPFMPFISEEMWQRL 700



 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 19/111 (17%)

Query: 40  LDGLDVLFTTGTDEHGQKIAKAAQNAGVT-----------------TKVFVDQNSRNFRD 82
           + G  VLF  G D  G       +                         + ++     ++
Sbjct: 1   MKGKTVLFLPGFDHAGIATQSVVEKQIWAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKN 60

Query: 83  MADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
               L  SYD      T       +    + ++ D+G IY+      +S++
Sbjct: 61  QIQKLGASYDWSREAFTLSPELTKSVEEAFVRLHDEGVIYRASRLVNWSVK 111


>gi|317503327|ref|ZP_07961375.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665550|gb|EFV05169.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 1211

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 125/342 (36%), Gaps = 45/342 (13%)

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
            +P +   E    V      +       + G  +  +   ++ VW D+ +       Y  
Sbjct: 623 FVPGDYSKENYDKVDLHRPYVDDIVLVNEAGEPMKRESD-LIDVWFDSGSMPYAQQHYPF 681

Query: 247 NPDGSKAK----------------------------FWPADLHVIGKDIL--RFHAIYWP 276
             + +                               ++PAD    G D     F  ++  
Sbjct: 682 EGELAPEALKATGKSEVGYRRELVTSTYEGIPVPPAYYPADFINEGVDQTRGWFFTLHAI 741

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           + ++  ++     + +   +  KG K+SK +GNV +P E+I++ G D +R++++      
Sbjct: 742 STMVFDHVAFKNVISTGLVLDAKGNKMSKHVGNVTNPFEMIDKYGADPVRFYMMTNSEPW 801

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESIL 391
            +  +D +G+ +     L   + N  S     +  + DG  P           E D  I+
Sbjct: 802 DNLKFDPNGVDE-TRRKLFGTLYNTYSFFA--LYANVDGFAPEAKQVALENRPEIDRWII 858

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY--FDAQKPWELKKTNPDRASTV 447
           S  + +++ +   ++N    RA   + + V++   + Y   + ++ W  + +  D+ S  
Sbjct: 859 SKANSLIKGVEHELENFDPTRAGRLIDAFVNDDLSNWYVRLNRKRFWGTEMS-QDKLSA- 916

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                  +  +A L+  F P  A++++  L    E+      
Sbjct: 917 YQTLYTCLMTVAKLMAPFAPFYADELYHDLGGKLESVHLDHF 958



 Score = 56.7 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +    + 
Sbjct: 41  PQFIFFEGPPSANGHPGIHHVLARAIKDTFNRYKTMKGYQVHRKAGWDTHGLPVELGVEK 100

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V + +  +R++ + +   +  D    T + 
Sbjct: 101 ELGITKKDIDNKASEKYISTEDYNKKCRENVMKFTAEWRELTEKMGYFVDLDHPYITYDN 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 161 KYIETLWWLLKQLYNKGLLYKGYTIQPYSPGAGTGLSSHELNQTGC 206


>gi|297831470|ref|XP_002883617.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329457|gb|EFH59876.1| hypothetical protein ARALYDRAFT_342735 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 108/306 (35%), Gaps = 46/306 (15%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           ++  DP  ++  W  +    L+  G+ D  +  KA F+PA +   G DIL F        
Sbjct: 494 ELSQDPD-VLDTWFSSGLFPLSVLGWPDETEDFKA-FYPASVLETGHDILFFWVARMVML 551

Query: 279 LLS---ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +     ++P  K           G K+SKSLGN IDP+EVI  V +  L   L      
Sbjct: 552 GMKVGGGDVPFRKVFLHPMIRDAHGRKMSKSLGNGIDPLEVINGVTLAGLHARLEEGNLD 611

Query: 336 GKDGFYDKDGLKK--------------------------RVNADL-----ANGIGNLVSR 364
            K+    K+G  K                          ++N D+          N +  
Sbjct: 612 PKELVVAKEGQVKDFPNGIPECGADSLRFALVSYTAQSDKINMDVLRVVGYRQWCNKLWN 671

Query: 365 SVSMILKDYDGMIPTPG------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
           +V   +         P       A   S + ILSV +  + +  +++    +  A   V 
Sbjct: 672 AVRFAMMKLGDGYTPPSQALSPRAMPFSCQWILSVLNTAISKTVDSLNAFELSDAANTVY 731

Query: 419 SLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +       D + +A KP      NP R      + V  +     LL  F+P +  +++  
Sbjct: 732 AWWQYQFCDVFIEAVKP-YFSAENPGRTHAQDALWV-CLETGLRLLHPFMPFVTEELWQR 789

Query: 477 LFVADE 482
           L    +
Sbjct: 790 LPSPQD 795



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + +  I           HIGHA    + D L R+ R+ G + L+  G D  G      
Sbjct: 102 SSKPQFVIVLPPPNVTGALHIGHALTCAVQDTLIRWKRMSGFNALWVPGFDHAGIATQVV 161

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                         + +  S   +     +  S D      T ++  
Sbjct: 162 VEKHLSRETGLTRHDFGREEFLNHVWQWTESKSGTIKSQLRRMGSSLDWSRECFTMDEHR 221

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +  EV  
Sbjct: 222 SKAVTEAFVRLHKEGLIYRDLRLVHWDCFLSTAISKREVEH 262


>gi|290961164|ref|YP_003492346.1| isoleucyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260650690|emb|CBG73806.1| putative isoleucyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 1047

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/402 (13%), Positives = 127/402 (31%), Gaps = 13/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G++ +  +N + W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLQENEKTNWFPDSVKHGRFGDWLNNNIDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         ++  L+   S  E           +   +  +  ++ +      G
Sbjct: 455 SRSRYWGTPLPIWRCEENHLTCVGSREELSRLSGTDQSELDPHRPFIDAITFACPEAGCG 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                 P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 TTATRVPE-VIDAWYDSGSMPFAQWGYPYKNKELFESRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++     ++      P        D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSNWAPSAADPAPADRPVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++   ++     RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LHALTDQVTGALEAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+    P +  +++  L V       +S+     P
Sbjct: 750 VVETVTRLMAPLTPFITERVWQDLIVPVSPEAPESVHLASWP 791



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAYGIAEFNARCRDSVTRHTDAFAELTTRMGYWVDLDDAYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 160 VESVWWSLKEIFNKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|184200760|ref|YP_001854967.1| valyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580990|dbj|BAG29461.1| valyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 861

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 103/266 (38%), Gaps = 19/266 (7%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
              DP  ++  W  +       TG+  + +    K +P DL   G DI+     +    A
Sbjct: 497 FMADPD-VLDTWATSSLTPQIATGWGVDEE-LHDKTFPMDLRPQGHDIIRTWLFSTVVRA 554

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+  +P      S   +    +K+SKS GNV+ P +V+E+ G DA+RY+       G 
Sbjct: 555 ETLAGTVPWTNTALSGWILDPDRKKMSKSKGNVVVPTDVLEKYGADAVRYW-AASARLGA 613

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-------DESI 390
           D  YD+  +K  +   LA  + N    +   +L          G+ T++       D S+
Sbjct: 614 DTAYDEGQMK--IGRRLAIKLLN----ASKFVLAQGVTEASVLGSGTDASVVTNGLDRSL 667

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLY 449
           L+  + V++      +     RAL  + S      D Y +  K         +  ++V  
Sbjct: 668 LAQLATVVERATAAFREYEYARALQLIESFFWTFTDDYVELVKDRAYGSRGAEAQASVHA 727

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
                +  +  L   F+P    +++ 
Sbjct: 728 ALATTLDTVLRLFAPFIPFATEEVWS 753



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 59/402 (14%), Positives = 122/402 (30%), Gaps = 64/402 (15%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +RE +Y I T     +   H+GH +     DV+ARF R+ G +V +  G D++G    +
Sbjct: 32  TDRESVYSIDTPPPTASGSLHVGHMFSYTQTDVIARFQRMSGKNVFYPLGWDDNGLPTER 91

Query: 61  A---------------------AQNAGVTTKVFVDQNSRNFRDMAD-------------- 85
                                  +      + +   + +NF ++ +              
Sbjct: 92  RVQNYYGVRCEPGRPYVEGYRPPEKPAKNQRDWDVVSRQNFIELCEELAVEDEKVFEHLF 151

Query: 86  ---VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
               L + ++   RT +       ++ + K  + G+ Y       + +         E+ 
Sbjct: 152 STLGLSVDWNRTYRTIDAHSRKVSQLAFLKDYEAGNAYMAEAPTMWDVTFRTAVAQAELE 211

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                  Y+     V +   +G    +   + +LL    +          ++   + V+S
Sbjct: 212 DRERESAYHR----VSFHRPDGEKVFIETTRPELLPACVALVAHPDDERYQHLFGTTVRS 267

Query: 203 GLKDLSLSRKTFD-------WGIKIPDDPQYIMYV-WIDALTNYLTTTGYLDNPDGSKAK 254
            L D+ +  K           GI +      +  V W   L          D    ++  
Sbjct: 268 ALFDVEVEVKAHPLAKPDKGSGIAMICTFGDLTDVTWWRELDLPTRALIGRDGRFQAEQP 327

Query: 255 FW-----PADLHVIGKDILRFHAIYWPAFLLSANLPL---PKKVFSHGFILHKGEK---I 303
            W     PA+ +        F A      +L  +  L   PKK+        KG+K   +
Sbjct: 328 EWIADGAPAERYAEVAGKTVFSAQKAVVDMLRESGDLDGEPKKIMHPVNFYEKGDKPLEV 387

Query: 304 SKSLGNVI--DPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
             S    I     +      +      +    +  +  + + 
Sbjct: 388 VTSRQWYIRNGGRDAERRYVLIQRGREMAWHPSFMRSRYENW 429


>gi|307256065|ref|ZP_07537853.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865487|gb|EFM97382.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 938

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 518 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 779



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 106 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|227517771|ref|ZP_03947820.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074780|gb|EEI12743.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 710

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +EK Y      YP+ Q  H+GH       D+L+R  R  G +VL   G D  G    + 
Sbjct: 40  NKEKFYALDMFPYPSGQGLHVGHPEGYTATDILSRMKRAQGYNVLHPMGWDAFGLPAEQY 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  
Sbjct: 100 ALDTGNDPAEFTKKNIETFRRQINSLGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLA 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +        +++EV  G   +        V       +  +++AY D+LL  
Sbjct: 160 YEAEVAVNWVPELGTVISNEEVIDGKSERGGYD----VVRRPMRQWMLKITAYADRLLED 215

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 216 LELVDWPESIKDMQRNWIGRSE 237



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 122/360 (33%), Gaps = 42/360 (11%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R ++  +     I      GDI    Y+G     +  + N     +         + 
Sbjct: 352 HDERDYEFAKTFGIDILPVIAGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEE 411

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +    +     S +
Sbjct: 412 NHVGKKEVSYRLRDWLFSRQRYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGT 471

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKF 255
            ++    I    +                M  W  +   YL      +     D  K K 
Sbjct: 472 GESPLANIDEWVNVVDPETGMKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKR 531

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P D+++ G +    H +Y   +         +    P  K       +    EK+SKS
Sbjct: 532 WLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKS 591

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V+ + G D LR + +          ++++GL+              + R  
Sbjct: 592 RGNVVNPDDVVAKYGADTLRLYEMFMGPLDASIAWNENGLEGSR---------KFLDRVW 642

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
            +I+ +   M       T +D  +  +  + ++++ E+M N   + A++Q++  V+E ++
Sbjct: 643 RLIVDEEGKMRDRIT--TINDGRLTKIYHQTVKKVTEDMANLHFNTAISQLMVFVNEANK 700


>gi|15893934|ref|NP_347283.1| leucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|32171578|sp|Q97LB6|SYL_CLOAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15023520|gb|AAK78623.1|AE007580_3 Leucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508061|gb|ADZ19697.1| leucyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 812

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF ++ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGAKLHAGHWFNYAPVDSWARFKKMTGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++D  + T    ++   + L+ ++   G  Y+
Sbjct: 91  KTGIHPKDSTLKNIETMEKQLKSMGAMFNWDHEVITCTPDYYKWTQWLFLELYKNGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G+           V   +   +FF+++ Y ++LL   +
Sbjct: 151 KKAPANWCPSCNTVLANEQVVDGS----CERCGTEVIKKDLTQWFFKITNYAEELLQKLD 206

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I   K
Sbjct: 207 ELDWPEKTKAMQKHWIGKSK 226



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 120/356 (33%), Gaps = 39/356 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E+ G            L Y              +E            
Sbjct: 418 QRYWGAPIPVVYCEKCGIVPVPEKDLPVELPYNVEFNPTGKSPLTTSEEFMNTTCPHCGG 477

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
             +R++      +     Y+ Y                       +K  P D +V G + 
Sbjct: 478 HATRESDTLDTFVCSSWYYLRYA--------DNENSDAPFDKEKISKMLPVDKYVGGPEH 529

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L+ + P          +   G+K+SKS GN I P ++I E
Sbjct: 530 ACMHLLYARFITKALRDIGYLNFDEPFLSLRHQGLILGPDGQKMSKSKGNTISPDDIIAE 589

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+      + G +  DG+K            +  SR +    ++ +    +
Sbjct: 590 HGSDVFRMYLMFGFDYAEGGAWSDDGVKAMS------KFVDRFSRMIETAKEEINNPKNS 643

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFD-AQKPWELKK 438
                + ++ +  V +  ++ + E+M     +  +A+++   + + +Y     K  +L K
Sbjct: 644 KTDMGKEEKELNYVRNHSIKAVTEDMDKFQFNTCIARLMEFTNSLSKYLTVDNKNIKLLK 703

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQR 492
                       T+++I+    L+  F P  A + ++I+    +  N  +   D++
Sbjct: 704 D----------TTIDIIK----LIAPFAPHFAEEQWNIIEEKYSVFNEKWPEFDEK 745


>gi|27904821|ref|NP_777947.1| valyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396628|sp|Q89AG3|SYV_BUCBP RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27904219|gb|AAO27052.1| valyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 956

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 52/359 (14%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
            S   +           +   +    +  + +  GL +  +  K              ++
Sbjct: 416 YSWMNNIKDWCISRQLLWGHRMPIWYDKKNNIYVGLDEKHIREKYHISDDIFLIQETDVL 475

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS------- 281
             W  +     ++ G+ +N D     F+  D+ V G DI+ F         +        
Sbjct: 476 DTWFSSSLWMFSSLGWPNNKD-LFKNFYSTDVVVSGFDIIFFWIARMIMLSMHLIKDHNG 534

Query: 282 -ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV-------------------- 320
              +P  K   +       G+K+SKS GNV+DP+++I+ +                    
Sbjct: 535 NGRVPFKKVYITGLICDEHGKKMSKSKGNVVDPLDMIDGISLDALIQKRIKSTVFSTHSK 594

Query: 321 -----------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                            GVDALR+         +   ++ + L      +  N + N   
Sbjct: 595 KIITQIQSLYPNGINSSGVDALRFTCAALSTPTRYIKWNINRLYG--YRNFCNKLWNASR 652

Query: 364 RSVSMILKDYDGMI-PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
             +  +  + + +        + SD  I++    +++  R  + N     A   +   V 
Sbjct: 653 FILMNLTHEVEPVKLILIKPMSLSDRWIVAEFHNLVKRYRTALDNYRFDIAANVLYEFVW 712

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
               D Y +  K + +   +     +     V ++  +  L    +P +  +I+  L V
Sbjct: 713 NKFCDFYIELVKSF-INSCSMLELKSTRCTLVYILDSVLRLAHPIIPFITEEIWQKLQV 770



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 19/163 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    I           HIGHA++  I D+L R++R+ G +  +  GTD  G      
Sbjct: 31  KGKPNFCIVMPPPNITGNLHIGHAFQQTIMDILIRYNRMIGKNTFWQVGTDHAGIATQIV 90

Query: 62  AQNAGVTT----------KVFVDQNSRN-------FRDMADVLDISYDDFIR--TTEKRH 102
            +   +            K F+++  +               L IS D      T + + 
Sbjct: 91  VEKKILKEENKTVQQLGKKEFLERIWKWKNTSKNVITSQMRRLGISVDWTHEKFTLDPQI 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
               R ++  + D+  IYK      +    +   +D EV    
Sbjct: 151 SFAVRKVFMTLYDECLIYKRKKLVNWDPVLKTVISDLEVKNRN 193


>gi|312601628|gb|ADQ90883.1| Valyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 822

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 142/345 (41%), Gaps = 46/345 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +++  +F ++      L+S+  S  +     +   + +      + D ++SR+   W
Sbjct: 347 VEILKKPQWFVKMDELAKSLISHLNSKDKIKFYPKNFEKNLRKWFEKIHDWTISRQ-LWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G +I                       + ++  W  +  +     G+  N D  K+ ++P
Sbjct: 406 GHRIPVWYKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISAFAFLGWPQNFDLIKS-YFP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             L V G DIL F    +Y+ +  +    P  K +         G K+SKSLGN +DP+E
Sbjct: 465 TSLLVTGWDILFFWVARMYFSSLFIMKQKPFEKVLLHGLIRDEIGRKMSKSLGNGLDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+        + D D 
Sbjct: 525 IIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNIAKY-----IADLDT 577

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
               P      D  + +    + ++I +N++         ++ + +      RY +    
Sbjct: 578 FFAKPD---LIDLWMENKIYILKRQIVKNIKKYNFSVIGTEINNFIYGDFSSRYIE---- 630

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             L KT  +      +   +++R++ I+L  F+P L + + + +F
Sbjct: 631 --LIKTRKN-----GFYARKLLRKVLIILHPFLPFLTDFLMEKIF 668



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I +       Q H+GH++   I D L R+H+L G DVL     D  G      
Sbjct: 29  QTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVDHAGIATQVK 88

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        + ++     ++  D L I YD     F  T ++ 
Sbjct: 89  VEEDLAKKGIKKSDLKREEFIKKCYHWKEKQYLKIKEQWDKLGICYDFSKERF--TLDQD 146

Query: 102 HHDTCRILWKKISDKGDIYK 121
                   + K+ +K  IY+
Sbjct: 147 AQIAVSDFFIKLWEKNLIYR 166


>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 932

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 775



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R     L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
          Length = 932

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 775



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R     L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
          Length = 932

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 775



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R     L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++K  IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKSYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|257076180|ref|ZP_05570541.1| isoleucyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 1009

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 90/261 (34%), Gaps = 10/261 (3%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y++  W D+ +       Y  N + +  +  P D      D     F+ ++  + LL   
Sbjct: 498 YVIDTWFDSGSASYAAMHYPFNKNFN-TEGIPVDFITEAIDQTRGWFYTLHVISSLLFGR 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
                 +     +   G+K+SKS GN +   + I   G D  R F               
Sbjct: 557 NAYKNVMSMSFILDENGQKMSKSKGNFVTARDFISMYGADPARLFFYTGAPWNSKSI--D 614

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             L       +   + N+ S   S    D         +    D  +LS  +  ++  R+
Sbjct: 615 KKLIGDTARKVFGTLSNVYSFFASNANLDGFVFQDLEPSSNLLDRWLLSRLNSTIENTRK 674

Query: 404 NMQNQLIHRALAQVISLVSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           NM    +H AL  ++ L+++   Y+     ++ WE K  +  + +         +  +  
Sbjct: 675 NMDEFDMHIALRNIMDLINDFSNYYLRLSRKRFWEGKLDDEKKKA--YETLYYTLINILK 732

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL    P   + ++  L   +
Sbjct: 733 LLAPLAPFYTDYMYQKLSGPE 753



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 3/148 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTT-GTDEHGQKIAKAAQ 63
           ++          N +PH+GH     + D + R+  + G D+   T G D HG  +   A+
Sbjct: 28  KRYTFLEGPPTANGRPHVGHLMTRTVKDTVMRYKYMSGYDIGRRTGGWDCHGLPVELEAE 87

Query: 64  NA--GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                 T K   D     F +       +Y D     +             ++ + D  +
Sbjct: 88  KHFGFNTKKEIEDFGIEKFNEYCRNSVFTYIDEWNEVDSEIGYWIDENKSYVTLRNDYME 147

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQY 149
             +     L DE     D        + 
Sbjct: 148 SEWYALKKLFDENMLVKDYKIVPYCPRC 175


>gi|48477604|ref|YP_023310.1| valyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74567946|sp|Q6L1N5|SYV_PICTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|48430252|gb|AAT43117.1| valyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 768

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 139/406 (34%), Gaps = 37/406 (9%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH-------- 154
            +  + + KK+ +   + K           E      E+         +           
Sbjct: 297 KEARKEIIKKLKENNYLIKTERIKHSVNTHERCGTPVEIIISKQWYIKDLDIKDELLDLG 356

Query: 155 NPVQW---MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV------ISFVKSGLK 205
           N ++W     +  Y   +S  +       + +     P+    +                
Sbjct: 357 NRIEWIPDYMKTRYQNWVSGLKWDWCISRQRYYGIPFPVWYCKDCGGIVLADKSELPVDP 416

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            LS + K    G    +    +M  W  +  +      ++++ +      +PAD+   G 
Sbjct: 417 RLSGTNKRCSCGSGNLEPETDVMDTWATSSISVTLYLMHINSMNL-----YPADVRFQGH 471

Query: 266 DILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           DI+   A      ++L   ++P  K   S       GEK+SKS GN+I+P  +IE+ G D
Sbjct: 472 DIITSWAFTTILRSYLHYRDVPWKKIFISGNVYDPYGEKMSKSKGNIIEPSTIIEKYGAD 531

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           ALR++       G++    +  L +         + N   R V M+  +  G +      
Sbjct: 532 ALRFW-ASTTMPGENIKIREQDLVR--GRKTVIKLYNSA-RLVLMLSDNIKGSM--DNII 585

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP 441
           ++ +  IL+   + L+ + E M      RA +++ +       D Y +  K     K  P
Sbjct: 586 SQVNRWILTKFEKTLKNVTELMDGYYFSRARSELDNFFWNIFCDNYLEIIK--SEIKRYP 643

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  + V    +E    +  +    +P +  +++        +   +
Sbjct: 644 EETAAVSRFLME---NIIKMYSPIMPFITEELYHEFNKDSLSVSLE 686



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 15/142 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I T     + + H+GHAY     D +AR+ R+ G  V +  G D++G    +  +   
Sbjct: 30  FIIDTPPPTVSGKMHMGHAYSYPHQDFMARYMRMKGFSVYYPWGFDDNGLPTERYVEKER 89

Query: 67  V-----TTKVFVDQNSRNFR--------DMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                 T      +  R                L +S D  ++I T+        + L+ 
Sbjct: 90  HVTIRNTPLDEYIKICREASRDAEKILLKNWYDLGLSCDFKNYIETSSDFSTRISQELFI 149

Query: 112 KISDKGDIYKGCYSGWYSLRDE 133
            +      Y+            
Sbjct: 150 DLVLNNRAYRAEAPVIRCPTCN 171


>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 932

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              +    L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFLKEEEE 775



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R     L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|288574736|ref|ZP_06393093.1| leucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570477|gb|EFC92034.1| leucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 835

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+    H+GH       D+  RF R+ G  VL   G D  G      A 
Sbjct: 34  KRRYVLDMFPYPSGAGLHVGHPEGYTATDIYCRFLRMKGYAVLHPMGFDSFGLPAENYAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G    V  ++N   FR+    L  SY  D  + T +  ++   + ++ K+ +KG  Y+
Sbjct: 94  KTGTHPVVTTERNIERFREQIKSLGFSYDWDREVSTHKSDYYRWTQWIFLKLFEKGLAYE 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    ++EV +G            V+      +  R++AY ++LL   +
Sbjct: 154 AETPINWCPSCQTGLANEEVKEG----RCERCGAQVERRNLRQWILRITAYAERLLQDID 209

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 210 KVEWPEAIKAMQRNWI 225



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 112/377 (29%), Gaps = 95/377 (25%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +         ++P+            E  +   +G   L+   
Sbjct: 413 YKLRDWVFSRQRYWGEPIPLVHCEKCGVVPVPEDQLPLVLPEVESYAPTGTGESPLAAID 472

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVI 263
              +        P       M  W  +   YL         +     K  +W P DL+V 
Sbjct: 473 SWVNTTCPCCGGPAKRETNTMPQWAGSCWYYLRYLDPDNESEFVGRDKVDYWMPVDLYVG 532

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFI------------------- 296
           G +    H +Y   +         ++ + P  + V                         
Sbjct: 533 GAEHAVLHLLYARFWHKVLFDLGVVNTDEPFQRLVNQGMITSFAYQRKDKSLVPTDEVEE 592

Query: 297 --------LHKGE-------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                      GE       K+SKSL NVI+P ++IE  G D++R + +          +
Sbjct: 593 TGPDTFVEKDTGEPLERVVAKMSKSLKNVINPDDIIENYGADSMRMYEMFMGPLQMSKPW 652

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
              GL         + +  L+ R +       D   P           +  V  + + ++
Sbjct: 653 STQGLIGVHR--FLDRLWRLMDRPL------VDDEPPV---------ELTRVLHQTIAKV 695

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             +  +   + A+AQ++  V+E  +                 A       +E      + 
Sbjct: 696 SSDTDSLNFNTAIAQMMVFVNECFK-----------------AEAAYRSLMEPF---VLC 735

Query: 462 LQAFVPKLANKIFDILF 478
           L  + P +A ++++ L 
Sbjct: 736 LCPYAPHMAEELWERLG 752


>gi|225568899|ref|ZP_03777924.1| hypothetical protein CLOHYLEM_04978 [Clostridium hylemonae DSM
           15053]
 gi|225162398|gb|EEG75017.1| hypothetical protein CLOHYLEM_04978 [Clostridium hylemonae DSM
           15053]
          Length = 807

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R+K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      
Sbjct: 32  KRQKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLLQGYYIVHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 92  AIKMGVHPARSTAENVENIKRQINEIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY ++LL+ 
Sbjct: 152 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLKITAYAERLLND 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 208 LDKLDWPEKVKKMQADWI 225



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 123/358 (34%), Gaps = 60/358 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 417 YKLRDWVFSRQRYWGEPIPIIHCPECGAVPVPEEELPLTLPDVESYEPTGTGESPLAGIE 476

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNP-----DGSKAKFWPADLHV 262
           +  +    +   P       M  W    + Y        N           +  P D+++
Sbjct: 477 EWVNCTCPVCKKPAKRETNTMPQWA-GSSWYFLRYVDNHNSEALVSREKADEMLPVDMYI 535

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G +    H +Y   +         +  + P  K           G K+SKS GNV+ P 
Sbjct: 536 GGVEHAVLHLLYSRFYTKFLCDIGAVDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPD 595

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +++ + G D+LR + +       D  +D  G+         +G+   + R+ +++++  D
Sbjct: 596 DLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKRAWNLVMESKD 646

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
             I          + ++ V ++++ +I   + +  ++  ++  +      ++  +  K  
Sbjct: 647 KDIKAT-------KEMIKVRNKMVYDITTRLDSFSLNTVISGFME---HNNKLIEIAK-- 694

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
             ++   D+         E +  LA+LL  F P +  ++++ L       N  + S D
Sbjct: 695 --REGGIDK---------ETLSTLAVLLSPFAPHMGEELWEQLGHEGSVFNAGWPSYD 741


>gi|309973536|gb|ADO96737.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 941

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 149/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L+ L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHLRTLELLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              PV+  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPVESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|289449562|ref|YP_003475660.1| leucine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184109|gb|ADC90534.1| leucine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 837

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+A + H+GH Y   ++D  AR  ++ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSAAKLHVGHWYNYALSDSWARLKKMQGYNVFQPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    +N     D    +    ++D  I T +  ++   + L+ ++   G  Y+
Sbjct: 90  KTGIPPETSTLKNIATMEDQLKQMGGLFAWDHEIFTCKPDYYKWTQWLFLQLYKHGMAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V     G       + +Q      +FF ++ Y  +LL    
Sbjct: 150 KNAPVNWCPSCQTVLANEQVI----GGRCERCDSEIQHKNLTQWFFSITKYAQELLDCLP 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                    + +   I   +
Sbjct: 206 QLDWPEKTKKIQTNWIGRSE 225



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 99/292 (33%), Gaps = 26/292 (8%)

Query: 216 WGIKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH 271
            G     DP     ++   W   L                  +  P D ++ G +    H
Sbjct: 488 CGKPAQRDPDTLDTFVCSSWY-YLRYVDPHLADKPFDRNDVDQMCPVDKYIGGAEHAAMH 546

Query: 272 AIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
            +Y             L  + P    V     +   G+K+SKS GN I P   + E G D
Sbjct: 547 LLYARFINKALRDMGFLDFDEPFKSLVHQGTILGEDGQKMSKSRGNTISPDTYVNEYGSD 606

Query: 324 ALRYFLVREIACGKDGFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
             R +L    A  + G +   G+    ++   +      L  R     L   +   P   
Sbjct: 607 VFRLYLAFAFAYTEGGPWSDSGVRAVAKMLNRVERYTAELKDRMAESKLAWNELKQPIHS 666

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
           A   +++ +  V +  ++ +  + +    + ++++++ +++ + +Y              
Sbjct: 667 ALNAAEKELNLVLNTSVRGVTVDAERFQFNTSISRIMEVLNAMQKYL---------GDEA 717

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
           DR +  L       +    LL  F P    ++++ L       N  + ++D+
Sbjct: 718 DRDAVSLSFLAYTHQLTLRLLAPFAPHFCEEMWEQLGYTSSIINSGWPAVDE 769


>gi|268592113|ref|ZP_06126334.1| isoleucine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291312509|gb|EFE52962.1| isoleucine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 936

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 130/393 (33%), Gaps = 48/393 (12%)

Query: 120 YKGCYSGWYSLRDE-AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +    + + G D      Q     + VQW+   G     S  ++
Sbjct: 398 IQHSYPCCWRHKTPVIFRATPQWFIGMDKNGLREQSLKEIDIVQWIPGWGRARIESMVEN 457

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          +  P+     +  E +      L +    R   D GI+   D       
Sbjct: 458 RPDWCISRQRTWGTPMSLFVHKDTEELHPRTLELMEEVAKRVEVD-GIQAWWDLDPAELL 516

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + +           G+      AD+++ G D     F +
Sbjct: 517 GDEAETYRKVPDTLDVWFDSGSTHFAVVDARPEFHGNS-----ADMYLEGSDQHRGWFMS 571

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  +    P  + +     +  +G K+SKSLGN + P +V+ ++G D LR ++   
Sbjct: 572 SLMLSTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLGADILRLWVAST 631

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESD 387
              G+    D+  + KR     A      +  +   +L + +G  P      P      D
Sbjct: 632 DYTGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPETDMVKPEDMVVLD 684

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRA 444
              +S      QEI +          + +++   S      Y D  K  +   K++    
Sbjct: 685 RWAVSRALEAQQEIAKAYDEYDFLSVIQRLMHFCSIEMGSFYLDIIKDRQYTAKSDSLAR 744

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +       ++  L   +   +   +++I++ L
Sbjct: 745 RSCQTALFHIVEALVRWMAPVLSFTSDEIWNEL 777



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLAGYDSPYIPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQIVGKPGEKVSAAEFRAQCRQYAKEQIEGQKADFMRLGVLGEWDKPYLTMDFKTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K    G + KG     +     +   + EV              P    +     
Sbjct: 166 IRALAKTIANGHLVKGAKPVHWCTACGSSLAEAEVEYYDKTSPSIYVRFPAVDGKAVCEK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F + + +   L    +   + LP  R
Sbjct: 226 FGIVSEKTPSL-VIWTTTPWTLPANR 250


>gi|119495194|ref|XP_001264387.1| isoleucyl-tRNA synthetase ,cytoplasmic [Neosartorya fischeri NRRL
           181]
 gi|119412549|gb|EAW22490.1| isoleucyl-tRNA synthetase ,cytoplasmic [Neosartorya fischeri NRRL
           181]
          Length = 1077

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGTL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  +++  G DALR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMQRYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 344 DG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSR 396
            G   +  +V   L N       ++      +    +  P A        D  IL+ C  
Sbjct: 641 SGVKEIVAKVLLPLWNSYKFFEGQAALFKKNNSIDFVFDPKAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGENGIDDTLHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F P + + I+  L
Sbjct: 761 YTLVRGLAPFTPFITDTIYQKL 782



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 90  IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRFASEWRETIERLGRWIDFDNDYKTMNSSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKQLFDKGLVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|148243311|ref|YP_001228468.1| isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851621|emb|CAK29115.1| Isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 959

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 113/307 (36%), Gaps = 26/307 (8%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
                 ++ L   +   +   W           M VW D+ +++    G     +   + 
Sbjct: 508 IWWERDEADLLPPAYRDQADQW-----RKGTDTMDVWFDSGSSWAGVLG-GLEAEADTSL 561

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PADL++ G D     F +    +  ++   P  + +     +  KG K+SKSLGNV+D
Sbjct: 562 NYPADLYLEGSDQHRGWFQSSLLTSVAVNGKAPYKRVLTHGFTLDEKGRKMSKSLGNVVD 621

Query: 313 P---------IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           P          +     G D LR ++   +    D       +K+   AD+   + N   
Sbjct: 622 PAVIVEGGKNQKQEPPYGADVLRLWV-SSVDYSADVPLGPGIVKQL--ADVYRKVRNTA- 677

Query: 364 RSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL- 420
           R +   L D+D              D  +L   +++L+E+  + +    +R    + +  
Sbjct: 678 RYLLGNLHDFDPSRDAVPLADLPLLDRWMLQRTAKILEEVSGDFERYEFYRFFQTLQNFC 737

Query: 421 -VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V   + Y D  K    +   +  R  +   V   V+ +LA ++   +  +A  I+  L 
Sbjct: 738 VVDLSNVYLDIAKDRLYVSAADSFRRRSCQTVMALVLERLAGMIAPVLSHMAEDIWQHLP 797

Query: 479 VADENRC 485
            + E   
Sbjct: 798 YSVEEAS 804



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 16/147 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------KAAQNA 65
             Y N   H+GHA    + D++ +   + G    +  G D HG  I        KA +  
Sbjct: 60  PPYANGALHVGHALNKTLKDIINKVQLMQGKKARYIPGWDCHGLPIELKVLQSLKAEERR 119

Query: 66  GVTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
            +           + +Q     R       I   +D    T +KR+  +   ++ ++   
Sbjct: 120 ELKPLELRRKAHAYAEQQVEGQRQGFRRWGIWGEWDIPYLTLQKRYEASQIDVFGRMVLA 179

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           G IY+G     +S        + E+  
Sbjct: 180 GHIYRGLKPVHWSPSSRTALAEAELEY 206


>gi|291515868|emb|CBK65078.1| valyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 878

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 121/373 (32%), Gaps = 56/373 (15%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++      +F  +    +             +P + +N         +KD  +SR+   W
Sbjct: 351 IEPKLSMQWFLSMQELAEPATKAVMEDAIRFVPEKYKNT-YRHWMENIKDWCISRQ-LWW 408

Query: 217 GIKIP------------------------------------DDPQYIMYVWIDALTNYLT 240
           G +IP                                       + ++  W  +    ++
Sbjct: 409 GQRIPAYYLPKGGFVVALTAEEALEKARAKSGDASLQLTDLRQDEDVLDTWFSSWLWPIS 468

Query: 241 TTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
               +  PD  +   ++P +  V G DI+ F    +    +      P     F+     
Sbjct: 469 VFDGIRFPDNREIGYYYPTNDLVTGPDIIFFWVARMIMAGYEYRGEKPFSNVYFTGIVRD 528

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
             G K+SK LGN  DP+E+IE+ G D +R  ++   + G D  +D+   ++    +  N 
Sbjct: 529 KIGRKMSKQLGNSPDPLELIEKFGADGVRMAMLISSSAGNDVMFDEALCEQ--GRNFGNK 586

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I N       +     D           +         R L++I E+ ++  I  A  + 
Sbjct: 587 IWNAYR---LLNGWAVDAAAAQSENNRLAVAWFGQALGRSLRQIAEDFKSYRISEAFKEA 643

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV----IRQLAILLQAFVPKLANKI 473
             L      ++D      L+   P     +   T+E        L  +L  F+P +  +I
Sbjct: 644 YRL------FWDDFSGLYLEMAKPAYGQPIDAPTMEATKGYFDALMRVLHPFMPFVTEEI 697

Query: 474 FDILFVADENRCF 486
           +  L    E    
Sbjct: 698 WQDLAPRAEGASI 710



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 20/158 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           +RE   I           H+GH     + DVL R  R+ G +  +  G D          
Sbjct: 32  QREPYTIVIPPPNVTGMLHMGHMLNNTLQDVLVRRARMSGKNACWVPGMDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT---EKRHH 103
                           +        + ++           L  S D + RT    ++   
Sbjct: 92  VAMLREKGIEKSSLTREEFLRHAWEWKEKYGGVILKQLRKLGASCD-WDRTCFTMDEART 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           ++   ++  + +KG IY+G     +    +   +D+EV
Sbjct: 151 ESVLRVFCDLYEKGKIYRGVRMVNWDPAAQTALSDEEV 188


>gi|301109357|ref|XP_002903759.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262096762|gb|EEY54814.1| valyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 957

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 87/563 (15%), Positives = 162/563 (28%), Gaps = 113/563 (20%)

Query: 27  EMIIADVL-------ARFHRLDGLDVLFT--------------------TG----TDEHG 55
           E I  DV        +R+ R  G  VL                      TG    T  H 
Sbjct: 210 ETIFGDVAVAVHPDDSRYQRYHGRYVLHPFSKEMIPIVTDETLVNMELGTGVVKVTPAHD 269

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISD 115
            K  + AQ   +     +D+  +   D+     I  D F     +R  +  + +   +  
Sbjct: 270 PKDFECAQRHALPEVEVIDKYGKLCGDIDQEF-IGLDRFDA--RQRVVEALQKMSLYVDK 326

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG-----QYYNAQHNPVQWMEEEGYFFRLS 170
                            E           +                ++       +F   
Sbjct: 327 LDHATALSICSRSGDVIEPLLMPQWYVDCSAMAKRAADNVRNGVMTIEPKSHAHTWFFFL 386

Query: 171 AYQDKLLSYYESHPEFILPIERRNE-------VISFVKSGLKDLSLSRKTFDWGIKIPDD 223
                     +      +P  R             +  +     +  +   + G ++ D+
Sbjct: 387 DNIQDWCVSRQLWWGHRIPAYRLKPGAIGAEASDKWFVAASLTEARQKAETELGCELRDE 446

Query: 224 P----QYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFH--A 272
                  ++  W  +    L+  G+ +           +  +P D+   G DIL F    
Sbjct: 447 DLEQDMDVLDTWFSSGLLPLSAFGWPNASSGDAVTQDLSASYPLDIMETGSDILFFWVAR 506

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV------------ 320
           +       S  +P  K +         G K+SKSLGNVIDP+ VI  +            
Sbjct: 507 MAMLCEEFSGRVPFEKVLLHPMVRDKAGRKMSKSLGNVIDPLHVINGISLDQLLSDLQGG 566

Query: 321 -------------------------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                                    G DALR+ L   +  G+    D   +         
Sbjct: 567 NVGSRELQKAEKELQKEFPKGIPTCGADALRFTLASYLQQGRQINMDVQRVVS--YRHFC 624

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSRVLQEIRENMQNQLI 410
           N + N V  ++ ++ +D + +     A      T +D  ILS  + V  E+ + +    +
Sbjct: 625 NKLWNAVRYALPLLERDDEALESVDLALLRDDMTLADRWILSRLAAVTSEVNDGIAANQL 684

Query: 411 HRALAQVISLV--SEVDRYFDAQKP----WELKKTNP------DRASTVLYVTVEVIRQL 458
             +++ +         D Y +  KP      L++ +        R  +        +   
Sbjct: 685 ATSVSAIQRFFVQELCDVYIEFSKPVLYGNRLEEDDDCTEERRARKRSAQATLHRCLDYS 744

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             LL  F P +  +++  +  AD
Sbjct: 745 MRLLHPFTPFVTEELWQRIREAD 767



 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 19/149 (12%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT-- 69
                    HIGHA  + I D +AR+HR+ G DV +  G D  G       +        
Sbjct: 15  PPPNVTGALHIGHALTITIQDAIARWHRMRGFDVRWLPGLDHAGIATQSVVERKLHKERG 74

Query: 70  ---------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKK 112
                            + +Q      +  D L   +  D    T +++        +  
Sbjct: 75  LSRYDLGREAFVDQVWQWNEQYGGKIMNQIDHLGAIVKKDQPYFTLDEQRSGAVINAFVT 134

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + +KG +Y+      +    +   +D EV
Sbjct: 135 LHEKGLVYRKRRMVNWCPTLQTAISDIEV 163


>gi|255069795|ref|NP_035820.3| valyl-tRNA synthetase [Mus musculus]
 gi|12643967|sp|Q9Z1Q9|SYVC_MOUSE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Protein G7a;
            AltName: Full=Valine--tRNA ligase; Short=ValRS
 gi|16118496|gb|AAL14452.1|AF397035_6 valyl-tRNA-synthetase G7a/Bat6 [Mus musculus]
 gi|16118505|gb|AAL14460.1|AF397036_6 valyl-tRNA-synthetase G7a/Bat6 [Mus musculus]
 gi|3986754|gb|AAC84151.1| G7A [Mus musculus]
 gi|148694748|gb|EDL26695.1| valyl-tRNA synthetase 2, isoform CRA_b [Mus musculus]
 gi|148694751|gb|EDL26698.1| valyl-tRNA synthetase 2, isoform CRA_b [Mus musculus]
          Length = 1263

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                +++   N   W      ++        +  +  + P    P  R            
Sbjct: 704  HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 763

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 764  EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 821

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 822  HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 881

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 882  QGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 941

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 942  ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNE 999

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1000 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1058

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1059 LSPFMPFVTEELFQRL 1074



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 336 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 395

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                                 +  +           L   + +D    T + +   T  
Sbjct: 396 WKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVT 455

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 489


>gi|210616052|ref|ZP_03290924.1| hypothetical protein CLONEX_03143 [Clostridium nexile DSM 1787]
 gi|210149960|gb|EEA80969.1| hypothetical protein CLONEX_03143 [Clostridium nexile DSM 1787]
          Length = 807

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK Y      YP+    H+GH    +I+DV +R+  L    ++   G D  G      
Sbjct: 32  KREKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLLQKYYIVHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   V   +N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 92  AIKMGVHPAVSTAENVKNIKRQINEIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y ++LL+ 
Sbjct: 152 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLRITKYAERLLAD 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + E I
Sbjct: 208 LDKLDWPEKVKKMQAEWI 225



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 102/249 (40%), Gaps = 42/249 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            +  P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 526 DEMLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAVDFDEPFKKLFNQGMITGKNGIKMS 585

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G+         +G+   ++R
Sbjct: 586 KSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVYRFLNR 636

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             ++++   D       A  ++ + ++ + ++++ +I   +++  ++  ++  +      
Sbjct: 637 VWNLVMDSKD-------ADVKATKEMIKIRNKMVYDITTRLESFSLNTVISGFMEYN--- 686

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
           ++  D  K    K+   D+         E +   A+LL  F P +A +++  L       
Sbjct: 687 NKLIDIAK----KEGGIDK---------ETLSTFAVLLAPFAPHMAEELWQQLGHEGTVF 733

Query: 483 NRCFQSLDQ 491
           N  + + D+
Sbjct: 734 NAGWPTYDE 742


>gi|322834473|ref|YP_004214500.1| isoleucyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169674|gb|ADW75373.1| isoleucyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 938

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 128/402 (31%), Gaps = 48/402 (11%)

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLSAYQD 174
               Y   +  +    +     +  +  Q    Q +      VQW+ + G     +   +
Sbjct: 399 ITHSYPCCWRHKTPIIFRATPQWFISMDQKGLRQQSLEEIKGVQWIPDWGQARIENMVAN 458

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P+     +  E +      L +    R   D GI+   D       
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKDTEQLHPRSLELMEEVAKRVEVD-GIQAWWDLNPEDIL 517

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +                P DL++ G D     F +
Sbjct: 518 GADAADYVKVPDTLDVWFDSGSTHSSVVD----VRPEFNGHSP-DLYLEGSDQHRGWFMS 572

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  +    P  + +     +  +G K+SKS+GN I P +V+ ++G D LR ++   
Sbjct: 573 SLMISTAMKGKAPYKQVLTHGFTVDGQGRKMSKSIGNTIAPQDVMNKLGGDILRLWVAST 632

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESD 387
              G+    D+  + KR     A      +  +   +L + +G  P      P      D
Sbjct: 633 DYTGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPALHSVAPEDMVVLD 685

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRA 444
              +        EI    +    H  + +++   S      Y D  K  +   K++    
Sbjct: 686 RWAVGRAKAAQDEIIAAYEAYDFHGVVQRLMQFCSIEMGSFYLDIIKDRQYTAKSDSVAR 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +       +   L   +   +   A++I+  L  + E   F
Sbjct: 746 RSCQTALYHISEALVRWMAPIMSFTADEIWAELPGSREKFVF 787



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 60/206 (29%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDMIVKSKGLAGFDAPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVTAAEFREACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     +     +   + EV                         
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCTDCGSSLAEAEVEYYDKASPSIDVAFNATDAAAVAAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S++   +     +   + +P  R
Sbjct: 226 FGVSSFNGPISLVIWTTTPWTMPANR 251


>gi|167957152|ref|ZP_02544226.1| valyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 373

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 18/219 (8%)

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G DIL      +       +  +P     F+   +   G+K+SKS GNVI+PIE++ + 
Sbjct: 3   TGADILFPWISRMIMLGLYRTGKIPFKDTYFNGLVLDENGQKMSKSKGNVINPIEILSQY 62

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR  +V   +  ++       +      +  N + N+       +  D+     TP
Sbjct: 63  GSDALRLGIVANRSAAQNQALSMGKIIA--GRNYCNKLWNISRFIGDKLGDDFTPSN-TP 119

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKK 438
            A + +D  I+S  ++   EI  ++       A   +   V +   D Y +A K  +L K
Sbjct: 120 QAKSLADHWIISELNKTCLEIGNHLDKFRFAEASEALYHTVWDSVADWYIEASKA-DLNK 178

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                      +   V+     +   F P ++  I+  L
Sbjct: 179 D----------LLAWVLETCLRMSHPFTPFVSETIWQNL 207


>gi|145240291|ref|XP_001392792.1| isoleucyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134077307|emb|CAK45647.1| unnamed protein product [Aspergillus niger]
          Length = 1077

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 55/275 (20%), Positives = 99/275 (36%), Gaps = 13/275 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y           +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASQHYPFENKEQFENSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  V+E  G DALR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPALVMERYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 344 DGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVCSR 396
            G+K+ V   L     +        ++    + +D         T     D  IL+ C  
Sbjct: 641 SGVKEIVAKVLLPLWNSYKFFEGQAALFKKTQGFDYTFDPKAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGENGVDDTQHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
             L   L  F P L + I+  L   + +  R   S
Sbjct: 761 YTLVRGLAPFTPFLTDTIYLKLLPHIPEALRSEDS 795



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  EGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R   + L   I +D+  +T     
Sbjct: 90  IDKKLGMSGLEAVEKIGIEKYNEECRAIVMRFASEWRQTIERLGRWIDFDNDYKTMNVSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DK  +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKQLFDKDLVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|81429045|ref|YP_396045.1| leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769672|sp|Q38VP5|SYL_LACSS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78610687|emb|CAI55738.1| Leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 807

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++  Y      YP+ Q  H+GH       D+LAR  R+ G +VL   G D  G    +
Sbjct: 28  KDKKNFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G     F  +N   F+   + L  SY  D  + TT+   +   + +++K+ +KG 
Sbjct: 88  YALDTGNNPADFTQKNINTFKRQINSLGFSYDWDREVNTTDPDFYKWTQWIFEKMYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +S        ++EV  G           PV       +  +++AY D+L+ 
Sbjct: 148 AYEAEVAVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKPMRQWMLKITAYADRLID 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   K
Sbjct: 204 DLDLVDWPESVKDMQRNWIGRSK 226



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 64/445 (14%), Positives = 143/445 (32%), Gaps = 67/445 (15%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + R  +  +     +      G+  +  ++    + +  + +  +     D        
Sbjct: 341 HDPRDWEFAKKFGLPLKPVVSGGNPEEAVHTEPGVMINSDFLDGLDKQAAIDKMIPWLVE 400

Query: 155 NPVQW----MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISF 199
           + V       +   + F    Y  + +                     LP+    +    
Sbjct: 401 HKVGHEQISYKLRDWLFSRQRYWGEPIPIIHWEDGTTSVVPEDQLPLELPLTSDIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW 256
            +S L +L+      D   +        M  W  +   YL      +     D  K K W
Sbjct: 461 GESPLANLTDWLNVTDENGRKGRRETNTMPQWAGSSWYYLRYIDPKNPDKLADFDKLKDW 520

Query: 257 -PADLHVIGKDILRFHAIY---WPAFLLSANLPLPKKVFSH-----GFILHKGEKISKSL 307
            P D+++ G +    H +Y   W  FL    +   K+ F H       +    EK+SKS 
Sbjct: 521 LPVDMYIGGAEHAVLHLLYVRFWHKFLYDIGVVPTKEPFQHLYNQGMILGDNHEKMSKSK 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +V++  G D LR + +          + + GL          G    + R   
Sbjct: 581 GNVVNPDDVVDRFGADTLRLYEMFMGPLDASISWSEKGL---------AGARKFLDRVWR 631

Query: 368 MILKDYDGMIPTPGAFTESD--ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
           +  ++         +   +D  + +  V +  ++++ E+ ++   + A++Q++  +++  
Sbjct: 632 LYTEEDTDENDQLSSKIVADNNDQLKKVYNETVKKVTEDFESMHFNVAISQLMVFINDAY 691

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR- 484
           +                          E       LL    P +  +++ +L   D    
Sbjct: 692 K--------------------ADTFPREYAEGFVKLLAPIAPHMMEELWAMLGHDDSISY 731

Query: 485 -CFQSLDQRLKPGFMLHKTFDPIFP 508
             + + D    P  ++    + IF 
Sbjct: 732 VDWPTFD----PAALIANEVEVIFQ 752


>gi|183508707|ref|ZP_02958193.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|182675629|gb|EDT87534.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
          Length = 806

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 61/359 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVIS 198
            D    N     V   +   + F    Y  +                 LP+   N     
Sbjct: 397 NDYLIKNHLGKKVANYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLNEFK 456

Query: 199 FVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYL 245
             K+G   L+ +++     I  K        M  W    + Y             T    
Sbjct: 457 PSKTGESPLANAQEWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNS 515

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           +      AK+ P D+++ G++    H +Y   +         +    P  K +     + 
Sbjct: 516 EEAKKRFAKWLPVDVYIGGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFYKVINQGMILG 575

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLAN 356
              EK+SKS GNVI+P ++I   G D LR + +          ++ DGL   R   D   
Sbjct: 576 ENNEKMSKSKGNVINPDDIIASHGADTLRIYEMFMGPLTASLPWNPDGLDAMRKWLDRVY 635

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + + +S             +       + +E I+     +++   + +  Q  + A+++
Sbjct: 636 RLYHNLS------------ELEVVEDLNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++  V+             L K           +  E++    ILL  + P LA +++ 
Sbjct: 684 MMVFVN------------VLYKNK--------VINYELLDNFLILLSCYAPHLAEELYS 722


>gi|31565370|gb|AAH53703.1| Valyl-tRNA synthetase [Mus musculus]
          Length = 1263

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                +++   N   W      ++        +  +  + P    P  R            
Sbjct: 704  HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 763

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 764  EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 821

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 822  HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 881

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 882  QGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 941

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 942  ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNE 999

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1000 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1058

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1059 LSPFMPFVTEELFQRL 1074



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 336 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 395

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                                 +  +           L   + +D    T + +   T  
Sbjct: 396 WKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVT 455

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 489


>gi|74191803|dbj|BAE32855.1| unnamed protein product [Mus musculus]
          Length = 1263

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                +++   N   W      ++        +  +  + P    P  R            
Sbjct: 704  HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 763

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 764  EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 821

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 822  HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 881

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 882  QGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 941

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 942  ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNE 999

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1000 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1058

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1059 LSPFMPFVTEELFQRL 1074



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 336 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 395

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                                 +  +           L   + +D    T + +   T  
Sbjct: 396 WKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVT 455

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 489


>gi|167515856|ref|XP_001742269.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778893|gb|EDQ92507.1| predicted protein [Monosiga brevicollis MX1]
          Length = 433

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 85/246 (34%), Gaps = 44/246 (17%)

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-------------- 318
           +      L+  LP  +          +G K+SKSLGNV+DP++V                
Sbjct: 1   MVMMCTYLTGQLPFKEVYLHTIIRDKEGRKMSKSLGNVVDPMDVRNGITLEDLHERLLEG 60

Query: 319 -----------------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                                  E GVDALR+ L      G+D   D   +      +  
Sbjct: 61  NLDPAELERAKEGQKRQFPDGIKECGVDALRFALCAFAQPGRDINLDVQRIVG--YRNFC 118

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTE--SDESILSVCSRVLQEIRENMQNQLIHRA 413
           N I N V   +  +  DY  +        E   D  +LS  S  +    + +       A
Sbjct: 119 NKIYNAVKLVMMQLGDDYKPLAWDAKTKNESTEDLWMLSRLSAAITTTNQCLSAYDFPGA 178

Query: 414 LAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              V +L      + Y +  KP   + ++  R + V  V  +V+     LL  F+P L  
Sbjct: 179 TTAVYNLWLYDFANNYLEMIKP-VFRGSDAKRQTAVRNVLFKVVDNGLRLLSPFMPFLTE 237

Query: 472 KIFDIL 477
           +++  L
Sbjct: 238 ELWQRL 243


>gi|331015494|gb|EGH95550.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 499

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 132/391 (33%), Gaps = 40/391 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV   V   +NS         ++I  D+++R        +    ++  + D G     D
Sbjct: 63  QGVDPVVLAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFTALRDAGAIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+      Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L +                  +      L D  ++R   D G+ 
Sbjct: 183 KTAHRAFLKLADFKPQLGNRLLGQAWRKPLDSW----LRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGACRVHTWFMGLAGYMAAFREYADSIGRPELFGQYWQSGQGTLVHFLGFDCVFTHA 297

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA   +   + + ++   + F+   G  +S S  + I   ++  +   D+ R +L  
Sbjct: 298 IVYPAQLSVLQGIKVRQRFVPNQFLKLDGLNLSTSRNHAIWVGDLARQACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                 +G +      +    +L NG    +
Sbjct: 358 IAPEDSEGDFRMTHFLE-WREELFNGFFPAL 387


>gi|54020305|ref|YP_116201.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823494|sp|Q5ZZL4|SYV_MYCH2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|53987478|gb|AAV27679.1| valyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 822

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 142/345 (41%), Gaps = 46/345 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+ +++  +F ++      L+S+  S  +     +   + +      + D ++SR+   W
Sbjct: 347 VEILKKPQWFVKMDELAKSLISHLNSKDKIKFYPKNFEKNLRKWFEKIHDWTISRQ-LWW 405

Query: 217 GIKI-------------------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           G +I                       + ++  W  +  +     G+  N D  K+ ++P
Sbjct: 406 GHRIPVWYKNDEFKVQIDSPGQGWIQDEDVLDTWFSSGISVFAFLGWPQNFDLIKS-YFP 464

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             L V G DIL F    +Y+ +  +    P  K +         G K+SKSLGN +DP+E
Sbjct: 465 TSLLVTGWDILFFWVARMYFSSLFIMKQKPFEKVLLHGLIRDEIGRKMSKSLGNGLDPME 524

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +IE+ G D LR  L+   + GKD  ++ + L    N  L N I N+        + D D 
Sbjct: 525 IIEKYGSDTLRQALIFNSSPGKDIKFNIEKLNTAWN--LNNKIWNIAKY-----IADLDT 577

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
               P      D  + +    + ++I +N++         ++ + +      RY +    
Sbjct: 578 FFAKPD---LIDLWMENKIYILKRQIVKNIKKYNFSVIGTEINNFIYGDFSSRYIE---- 630

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             L KT  +      +   +++R++ I+L  F+P L + + + +F
Sbjct: 631 --LIKTRKN-----GFYARKLLRKVLIILHPFLPFLTDFLMEKIF 668



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 22/140 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   I +       Q H+GH++   I D L R+H+L G DVL     D  G      
Sbjct: 29  QTKKPFSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVDHAGIATQVK 88

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEKR 101
            +                        + ++     ++  D L I YD     F  T ++ 
Sbjct: 89  VEEDLAKKGIKKSDLKREEFIKKCYHWKEKQYLKIKEQWDKLGICYDFSKERF--TLDQD 146

Query: 102 HHDTCRILWKKISDKGDIYK 121
                   + K+ +K  IY+
Sbjct: 147 AQIAVSDFFIKLWEKNLIYR 166


>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 921

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 128/341 (37%), Gaps = 33/341 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDNFNPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ ++++  +          + +   +     Y D  K    ++  +  
Sbjct: 675 VDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +  V  +V+  L  L+   +P  A++++  +  A+E 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGAEEE 775



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|212531977|ref|XP_002146145.1| isoleucyl-tRNA synthetase ,cytoplasmic [Penicillium marneffei ATCC
           18224]
 gi|210071509|gb|EEA25598.1| isoleucyl-tRNA synthetase ,cytoplasmic [Penicillium marneffei ATCC
           18224]
          Length = 1079

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PA     G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYAAVHYPFERQEEFQNAFPAQFIAEGLDQTRGWFYTLSVLGCHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G+K+SK L N  DP  +++  G DALR +L+       +    K+
Sbjct: 581 PYQNVIVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMI-----LKDYDGMIPTPGAFTE---SDESILSVCSR 396
              K + + +   + N        +     +++ D +       T     D  IL+ C  
Sbjct: 641 AGVKEIISKVLLPLWNSYKFFEGQVALLKKIENIDYVFDPEAEVTNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + + M    ++  + +++ L+    + Y    +     +   +     L    EV+
Sbjct: 701 LLKFVNQEMSAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGENGVEDTQHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F+P + + I+  L
Sbjct: 761 YTLVRGLAPFIPFITDTIYLRL 782



 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+         +    PH GH     I D++ R+  + G       G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYFSMTGHYCERRFGWDTHGVPIEHE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   + L   I +D+  RT +   
Sbjct: 90  IDKKLGMSGSEAVEKLGIAQYNAECRAIVMRYAGEWRQTIERLGRWIDFDNPYRTLDATF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K+++DK  +Y+
Sbjct: 150 MESVWWIFKQLADKDMVYR 168


>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 921

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 128/341 (37%), Gaps = 33/341 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ ++++  +          + +   +     Y D  K    ++  +  
Sbjct: 675 VDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +  V  +V+  L  L+   +P  A++++  +  A+E 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGAEEE 775



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|171920926|ref|ZP_02932075.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|225550463|ref|ZP_03771412.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903154|gb|EDT49443.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|225379617|gb|EEH01979.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 806

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 61/359 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVIS 198
            D    N     V   +   + F    Y  +                 LP+   N +   
Sbjct: 397 NDYLVKNHLAKKVVNYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLDEFK 456

Query: 199 FVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYL 245
             K+G   L+ +++     I  K        M  W    + Y             T    
Sbjct: 457 PSKTGESPLANAQEWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNS 515

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           +      AK+ P D+++ G++    H +Y   +         +    P  K +     + 
Sbjct: 516 EEAKKRFAKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILG 575

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLAN 356
              EK+SKS GNVI+P ++I   G D LR + +          +  DGL   R   D   
Sbjct: 576 ENNEKMSKSKGNVINPDDIIASHGADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVY 635

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + + +S             +       + +E I+     +++   + +  Q  + A+++
Sbjct: 636 RLYHNLS------------ELEVVEDVNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++  V+             L K           +  +++    ILL  F P LA +++ 
Sbjct: 684 MMVFVN------------VLYKNK--------VINYKLLDNFLILLSCFAPHLAEELYS 722


>gi|296133361|ref|YP_003640608.1| isoleucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031939|gb|ADG82707.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
          Length = 934

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 16/279 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G         IM VW D+ +++       +     +   WPADL++ G D     F
Sbjct: 516 CPSCGRTEFRKETDIMDVWFDSGSSHKAVLEQPEIWPDLR---WPADLYLEGSDQHRGWF 572

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    +   +   P    +     +  +G K+SKSLGN IDP+EVI ++G D LR ++ 
Sbjct: 573 NSSLCTSVATTGKAPYKTVLTHGFLVDEQGRKMSKSLGNGIDPLEVINKMGADILRLWVS 632

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDE 388
                  D     + LK+   ++    I N     +  +  D+D    T       E D+
Sbjct: 633 SADY-KADVALSSNILKQ--MSEAYRKIRNTARYILGNLY-DFDPAKDTVPYEQMEELDK 688

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RA 444
             L    ++ + +    +N   H     + +   V     Y D  K   L  + P     
Sbjct: 689 WALLKLHKLSKRVLNAYRNYEFHILYHAIHNFCAVDMSAFYLDIIKD-RLYTSLPSSVER 747

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
                V  E+I  L  L+   +   A +I+  +   +EN
Sbjct: 748 RAAQTVMYEIINTLVRLIAPVLSYTAEEIWRYIPYKEEN 786



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK  +     Y N   H+GH    ++ D++ +F  +DG D  F  G D HG  I + A
Sbjct: 46  GKEKFILHDGPPYANGDIHLGHTLNKVLKDIIVKFKSMDGFDAPFVPGWDTHGLPIEQQA 105

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             A                 K +  +     R+    L     +D+   T +        
Sbjct: 106 IKALGINRHEVGPVEFRKKCKEYALKYVDIQREQFKRLGCRGDWDNPYLTLQPHFEAKQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ +++ KG IYKG    ++    E    + E+  
Sbjct: 166 EVFGEMAKKGYIYKGLKPVYWCASCETALAEAEIEY 201


>gi|185178964|ref|ZP_02964721.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024264|ref|ZP_02996960.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518576|ref|ZP_03004032.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|225551627|ref|ZP_03772573.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209243|gb|EDU06286.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018928|gb|EDU56968.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997837|gb|EDU66934.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|225379442|gb|EEH01807.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 806

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 61/359 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVIS 198
            D    N     V   +   + F    Y  +                 LP+   N +   
Sbjct: 397 NDYLVKNHLAKKVVNYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLDEFK 456

Query: 199 FVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYL 245
             K+G   L+ +++     I  K        M  W    + Y             T    
Sbjct: 457 PSKTGESPLANAQEWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNS 515

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           +      AK+ P D+++ G++    H +Y   +         +    P  K +     + 
Sbjct: 516 EEAKKRFAKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILG 575

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLAN 356
              EK+SKS GNVI+P ++I   G D LR + +          +  DGL   R   D   
Sbjct: 576 ENNEKMSKSKGNVINPDDIIASHGSDTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVY 635

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + + +S             +       + +E I+     +++   + +  Q  + A+++
Sbjct: 636 RLYHNLS------------ELEVVEDVNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++  V+             L K           +  +++    ILL  F P LA +++ 
Sbjct: 684 MMVFVN------------VLYKNK--------VINYKLLDNFLILLSCFAPHLAEELYS 722


>gi|148828139|ref|YP_001292892.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166200213|sp|A5UIA3|SYI_HAEIG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148719381|gb|ABR00509.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 941

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMVSLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|323166620|gb|EFZ52379.1| valyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 409

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 81/229 (35%), Gaps = 44/229 (19%)

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEV------------------------------ 320
            +      +G+K+SKS GNVIDP+++++ +                              
Sbjct: 1   MTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQF 60

Query: 321 -------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
                  G DALR+ L    + G+D  +D   L+     +  N + N  SR V M  +  
Sbjct: 61  PNGIEPHGTDALRFTLAALASTGRDINWDMKRLEG--YRNFCNKLWN-ASRFVLMNTEGQ 117

Query: 374 DG-MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDA 430
           D          + +D  IL+  ++ ++  RE + +     A   +         D Y + 
Sbjct: 118 DCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLEL 177

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            KP  +            +  V V+  L  L    +P +   I+  + V
Sbjct: 178 TKP-VMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKV 225


>gi|158186770|ref|NP_445744.1| valyl-tRNA synthetase [Rattus norvegicus]
 gi|73920806|sp|Q04462|SYVC_RAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
            ligase; Short=ValRS
 gi|46237603|emb|CAE83981.1| valyl-tRNA synthetase 2 [Rattus norvegicus]
 gi|149028031|gb|EDL83482.1| rCG38382, isoform CRA_c [Rattus norvegicus]
 gi|149028033|gb|EDL83484.1| rCG38382, isoform CRA_c [Rattus norvegicus]
          Length = 1264

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 116/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                +++   N   W      ++        +  +  + P    P  R            
Sbjct: 705  HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFHAIYWPAFLLSANLPLP-KKVFSHGFILH-KGEKISKSLGNVIDPIEVIE---- 318
             DIL F         L     LP ++V+ H  +    G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTEKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSKPEGHESLVDRWIRSRLAEAVRLSNE 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAADCARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                                 +  +           L   + +D    T + +   T  
Sbjct: 397 WKERGLNRHQLGREAFLQEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVT 456

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 457 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|13357931|ref|NP_078205.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762455|ref|YP_001752454.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|14285782|sp|Q9PQC0|SYL_UREPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083178|sp|B1AJ10|SYL_UREP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|11271161|pir||F82899 leucyl-tRNA synthetase UU371 [imported] - Ureaplasma urealyticum
 gi|6899353|gb|AAF30780.1|AE002134_4 leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168828032|gb|ACA33294.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
          Length = 806

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 61/359 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVIS 198
            D    N     V   +   + F    Y  +                 LP+   N     
Sbjct: 397 NDYLIKNHLGKKVANYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLNEFK 456

Query: 199 FVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYL 245
             K+G   L+ +++     I  K        M  W    + Y             T    
Sbjct: 457 PSKTGESPLANAQEWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNS 515

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           +      AK+ P D+++ G++    H +Y   +         +    P  K +     + 
Sbjct: 516 EEAKKRFAKWLPVDVYIGGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFYKVINQGMILG 575

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLAN 356
              EK+SKS GNVI+P ++I   G D LR + +          ++ DGL   R   D   
Sbjct: 576 ENNEKMSKSKGNVINPDDIIASHGADTLRIYEMFMGPLTASLPWNPDGLDAMRKWLDRVY 635

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + + +S             +       + +E I+     +++   + +  Q  + A+++
Sbjct: 636 RLYHNLS------------ELEVVEDLNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++  V+             L K           +  E++    ILL  + P LA +++ 
Sbjct: 684 MMVFVN------------VLYKNK--------VINYELLDNFLILLSCYAPHLAEELYS 722


>gi|195867880|ref|ZP_03079879.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660457|gb|EDX53715.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 806

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 61/359 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVIS 198
            D    N     V   +   + F    Y  +                 LP+   N +   
Sbjct: 397 NDYLVKNHLAKKVVNYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLDEFK 456

Query: 199 FVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYL 245
             K+G   L+ +++     I  K        M  W    + Y             T    
Sbjct: 457 PSKTGESPLANAQEWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNS 515

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           +      AK+ P D+++ G++    H +Y   +         +    P  K +     + 
Sbjct: 516 EEAKKRFAKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILG 575

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLAN 356
              EK+SKS GNVI+P ++I   G D LR + +          +  DGL   R   D   
Sbjct: 576 ENNEKMSKSKGNVINPDDIIASHGADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVY 635

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + + +S             +       + +E I+     +++   + +  Q  + A+++
Sbjct: 636 RLYHNLS------------ELEVVEDVNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++  V+             L K           +  +++    ILL  F P LA +++ 
Sbjct: 684 MMVFVN------------VLYKNK--------VINYKLLDNFLILLSCFAPHLAEELYS 722


>gi|302805957|ref|XP_002984729.1| hypothetical protein SELMODRAFT_120741 [Selaginella moellendorffii]
 gi|300147711|gb|EFJ14374.1| hypothetical protein SELMODRAFT_120741 [Selaginella moellendorffii]
          Length = 848

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 68/447 (15%), Positives = 136/447 (30%), Gaps = 54/447 (12%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                 R  +          +        ++ + Y +  E+   A     N +   V   
Sbjct: 353 ERKKLFRGKFPHKKPLAICSRSSDVLEPMMKPQWYVDCKEMAARACEALRNNELQIVPSS 412

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS---------- 210
             + ++             +  H                        +++          
Sbjct: 413 FADIWWLENIEDWCVSRQLWWGHRIPAWYAVLDANEDQTFGIYDDHWAVADSEQAADAEI 472

Query: 211 -RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
            ++      K+  DP  ++  W  +     ++ G+ D+     A F+P  +   G DIL 
Sbjct: 473 KQRFPGATFKLQHDPD-VLDTWFSSGLFPFSSLGWPDSTA-DYAAFYPTTVLETGHDILF 530

Query: 270 FH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
           F    +      L+  LP    +           K+SKSLGNVIDP++VI  + +D L  
Sbjct: 531 FWVARMVMLGTQLTGQLPFKTVLLHGMVRDAHKRKMSKSLGNVIDPLDVISGISLDDLVA 590

Query: 328 FLVREIACGKDGFYDKDGL------------------------KKRVNADL-------AN 356
            L        +     +GL                         +  N +L         
Sbjct: 591 KLALLNLQPSELKQATEGLHKDFPRGIPECGVDALRFGLIAYTAQAENMNLNIQRFLGYR 650

Query: 357 GIGNLVSRSVSMILKDY-DGMIPTPG----AFTESDESILSVCSRVLQEIRENMQNQLIH 411
              N +  +V  +  ++ DG  P       +   S + ILS  + ++ +I ++     + 
Sbjct: 651 QWCNKLWNAVRFVRLNFHDGFEPEEDLDISSLPWSCKWILSSLNDIVCKINKSFARYDLS 710

Query: 412 RALAQVISLV--SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPK 468
            A + V S    S  D + +  KP    +    D  +         +     +L  F+P 
Sbjct: 711 GASSAVYSWWQYSLCDVFIELVKPLLSSEELGEDGKAATRSTLYICLDSGLRMLHPFMPF 770

Query: 469 LANKIFDILFVADENRCFQSLDQRLKP 495
           +  +++  L    ++    S+     P
Sbjct: 771 ITEELWQRLPHKKKSEERSSIMTASYP 797



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 46/164 (28%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
               K  +           H+GHA  + + D L R  R+ G   L+  G D  G      
Sbjct: 41  STEPKFVMVLPPPNVTGHLHLGHALTVSVQDALVRHSRMSGRVTLWLPGVDHAGIATQVV 100

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +    +T+                  +  +           +  S D      T + + 
Sbjct: 101 VEKKLASTQNLTRHDLGRDAFVEKVWEWKTEYGGAICSQLRTMGASLDWSRECFTMDLQR 160

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                  + ++   G IY+      +    +   +D EV    D
Sbjct: 161 SRAVTEAFVRLYKAGLIYRANRMVKWDCSLKTAISDIEVEHTGD 204


>gi|161504824|ref|YP_001571936.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160866171|gb|ABX22794.1| hypothetical protein SARI_02948 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 956

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 63/412 (15%), Positives = 134/412 (32%), Gaps = 48/412 (11%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGY 165
           K +    +  +  Y   +  +    +       V    +G       + N VQW+ + G 
Sbjct: 402 KGVLLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEINGVQWIPDWGQ 461

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKI 220
               S   ++          + +P+     +  + +  ++  L  +    K  +  GI+ 
Sbjct: 462 ARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQA 521

Query: 221 PDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
             D                    + VW D+ +       Y       +     AD+++ G
Sbjct: 522 WWDLDPKEILGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEG 576

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G 
Sbjct: 577 SDQHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGA 636

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---- 378
           D LR ++      G+    D+  + KR     A      +  +   +L + +G  P    
Sbjct: 637 DILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDM 689

Query: 379 -TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWE 435
             P      D   +       +EI +  +    H  + +++   S      Y D  K  +
Sbjct: 690 VKPEEMVVLDRWAVGCAKTAQEEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQ 749

Query: 436 L-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 750 YTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|270159965|ref|ZP_06188621.1| Isoleucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165291|ref|YP_003455429.1| Isoleucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988304|gb|EEZ94559.1| Isoleucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858464|emb|CBJ12342.1| Isoleucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 931

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/278 (20%), Positives = 99/278 (35%), Gaps = 17/278 (6%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
              M VW D+   +            +K   +PAD++  G D     F++    +  +  
Sbjct: 527 NDTMDVWFDSGVTHFCVLQ------QNKDLSFPADIYFEGSDQHRGWFNSSLTTSVAMYD 580

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  +G+K+SKS GN +   +++ + G D LR ++       +    D
Sbjct: 581 VAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDQLVNQYGADILRLWVASTDYRHEVSISD 640

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
           +     + NAD    I N   R +   L D+D            E D+  L  C  + +E
Sbjct: 641 E---IIKRNADAYRRIRNTA-RFLLANLFDFDPTKDCVEANDLLELDKWALKRCQLLQEE 696

Query: 401 IRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT-VEVIRQ 457
           I E  +N   H    ++ +   V     Y D  K  +       RA          +IR 
Sbjct: 697 IIEAYENYQFHIIYQKIHNFCAVDMGSFYLDLIKDRQYTSAKHSRARRSCQTAMYHMIRA 756

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             + L   +   A +I   +   +++  F  L     P
Sbjct: 757 FTLWLAPILSFTAEEIGRYIPGYEQDSIFTELWYTAWP 794



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 15/155 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   H GHA   I+ D++ +   L G D  F  G D HG  I    + 
Sbjct: 49  KKFILHDGPPYANGHLHCGHALNKILKDIIVKSKSLSGYDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
                             + +        RD    L +  D +    T + R+       
Sbjct: 109 KIGRVGDKVSARDFRAKCREYAASQIDIQRDEFQRLGVFGDWYNPYVTMDFRYEANIVRA 168

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
              +   G + +G     + +   +   + EV   
Sbjct: 169 LGLMIKNGHLQQGFKPVHWCIDCGSALAEAEVDYD 203


>gi|209554437|ref|YP_002284773.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|238064873|sp|B5ZBI3|SYL_UREU1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209541938|gb|ACI60167.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
          Length = 806

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 88/233 (37%), Gaps = 41/233 (17%)

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKI 303
            AK+ P D+++ G++    H +Y   +         +    P  K +     +    EK+
Sbjct: 522 FAKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILGENNEKM 581

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLV 362
           SKS GNVI+P ++I   G D LR + +          +  DGL   R   D    + + +
Sbjct: 582 SKSKGNVINPDDIIASHGADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLYHNL 641

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
           S             +       + +E I+     +++   + +  Q  + A+++++  V+
Sbjct: 642 S------------ELEVVEDVNKLNEEIIITYHTLIKNYTKAINEQAFNIAISEMMVFVN 689

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                        L K           +  +++    ILL  F P LA +++ 
Sbjct: 690 ------------VLYKNK--------VINYKLLDNFLILLSCFAPHLAEELYS 722


>gi|74204201|dbj|BAE39862.1| unnamed protein product [Mus musculus]
          Length = 895

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +++   N   W      ++        +  +  + P    P  R            
Sbjct: 336 HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 395

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 396 EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 453

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 454 HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 513

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L    + G+D   D + 
Sbjct: 514 QGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 573

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 574 ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNE 631

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 632 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 690

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 691 LSPFMPFVTEELFQRL 706


>gi|332140401|ref|YP_004426139.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550423|gb|AEA97141.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 939

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 64/433 (14%), Positives = 138/433 (31%), Gaps = 30/433 (6%)

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKG 144
            D+ I T +++ +    + ++        +K           + S+  +    +      
Sbjct: 384 NDEIIETVKEKGNLVLNVKYEHSYPHCWRHKTPIIFRATPQWFISMDKKGLRAESLEQIK 443

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK------LLSYYESHPEFILPIERRNEVIS 198
                 +   N ++ M E    + +S  +         +                   + 
Sbjct: 444 QTKWIPDWGQNRIEKMVEGRPDWCISRQRTWGVPIPLYVHKLTGEIHPESSALMEKVALE 503

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               G++           G  + +  +    + VW D+   +       D+   S     
Sbjct: 504 VESKGIQAWWDLDDAELLGSDLDNYDKVTDTLDVWFDSGVTHYFVVDRRDDIPAS----- 558

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            ADL++ G D     F +    +  +  + P  + +     +   G K+SKS+GNV+ P 
Sbjct: 559 -ADLYLEGSDQHRGWFMSSLMSSTAMHGHAPYKEVLTHGFTVDAHGRKMSKSVGNVVAPQ 617

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           EV  ++G D LR ++      G+    D+     +  AD    + N  SR +   L  ++
Sbjct: 618 EVTNKLGADILRLWVASTDYRGEIAVSDE---ILKRAADAYRRVRNT-SRFLLANLNGFN 673

Query: 375 GMIP-TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQ 431
                        D  I++    + +E+ E  +   +     +++   S      Y D  
Sbjct: 674 VEDAVAENEMVALDRWIVARAKALQEELIEAYEKYDLLVVSQKLMHFCSIELGSFYLDVI 733

Query: 432 KPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K  +   K +     +       ++  L   +   +   A +I++ L        F    
Sbjct: 734 KDRQYTAKADGLARRSCQTAMYHIVEALVRWMAPVMSFTAQEIWETLPGERSEFVFTETW 793

Query: 491 QRLKPGFMLHKTF 503
                GF   +TF
Sbjct: 794 YEGLNGFTQSETF 806



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L   D  +  G D HG  I   
Sbjct: 46  KGKKPFILHDGPPYANGDIHIGHAVNKILKDIIVKSKNLSDFDSPYVPGWDCHGLPIELM 105

Query: 62  AQ-------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +           L +   +D+  +T + +     
Sbjct: 106 VEKKVGKPGKKVTAAEFRQKCREYAQKQIDGQMADFKRLGVFGEWDNPYKTMDFKSEADI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G + KG     +     +   + EV  
Sbjct: 166 IRALGKIVDSGHLEKGFKPVHWCTDCGSALAEAEVEY 202


>gi|115433634|ref|XP_001216954.1| valyl-tRNA synthetase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
 gi|114189806|gb|EAU31506.1| valyl-tRNA synthetase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
          Length = 998

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 120/364 (32%), Gaps = 52/364 (14%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE----VISFVKSGLKDLSLSRKTFDWG 217
                    + Q        ++   I   +R N+         ++ L+    + + F   
Sbjct: 447 MRNLQDWCLSQQLWWGHQIPAYFITIEGEDRGNDANDDYWVCGRTELEAQENAEEKFPGK 506

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
                  + ++  W  +     +T G+ D       K++P      G DIL F    +  
Sbjct: 507 KVTLKRDEDVLDTWFSSALWPFSTLGWPDKTS-DLEKYFPNTTMETGWDILPFWVSRMIM 565

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L+  +P  +           G K+SKSLGNVIDPI++++ + +D L+  L+     
Sbjct: 566 FSLKLTGKVPFTEVFCHGLIRDSDGRKMSKSLGNVIDPIDILDGISLDDLQQKLLEGNLA 625

Query: 336 GK--------------------------------------DGFYDKDGLKKRVNADLANG 357
                                                   D  +D   ++        N 
Sbjct: 626 QNEVKNAERYQRKAFPQGIPEVGADALRFSLVHYTQASGGDINFDVKTMQG--YRRFCNK 683

Query: 358 IGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           I       +  +  D+     +   G  +  ++ IL+  +   ++I + +++    +A  
Sbjct: 684 IYQATKYVLGKLGDDFAPRESSALTGKESLPEKWILTRMNTAAKQINQALEDCGFAKATE 743

Query: 416 QVIS-LVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
            +   L  E+ D Y +  K   +    P  A + +      +     L+  F+P L  ++
Sbjct: 744 IIYRYLYDELFDIYIENSKV-IISDGTPGEARSAMDTLYTTLEAGLRLMSPFMPFLTEEL 802

Query: 474 FDIL 477
           +  L
Sbjct: 803 WQRL 806



 Score = 45.9 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGT 51
           +K + K  I+        + HIGHA  + + D L R+H + GL+     G 
Sbjct: 112 LKPKGKYVIAIPPPNVTGKLHIGHALALSLEDTLIRWHLMPGLEGGLPNGD 162


>gi|91215675|ref|ZP_01252645.1| putative valyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186141|gb|EAS72514.1| putative valyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 875

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 124/363 (34%), Gaps = 52/363 (14%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F ++       ++      E  L  ++           ++D ++SR+   W
Sbjct: 350 IEPRLSDQWFLKMKDLAKPAITAVLESDEIHLHPKKFENTYRHWMENIRDWNISRQ-LWW 408

Query: 217 GIKIP-------------------------------------DDPQYIMYVWIDALTNYL 239
           G +IP                                          ++  W  +    +
Sbjct: 409 GHQIPAYYFGDGENDYVVAKTKEDALHLAKEKSGKSLSLSDLTQDSDVLDTWFSSWLWPI 468

Query: 240 TTTGYLDNP-DGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFI 296
           +    + NP +     ++P +  V G DIL F    +    +  +   P      +    
Sbjct: 469 SVFDGIRNPENKEFQYYYPTNDLVTGPDILFFWVARMIMAGYEYTGQKPFENVYLTGLVR 528

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             + +K+SKSLGN  D +++IE    D +R  L+   A G D  +D+   ++      +N
Sbjct: 529 DKQRKKMSKSLGNSPDALKLIENYSADGVRVGLLLSNAAGNDLLFDEALCQQ--GKGFSN 586

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            I N      S    +    I  P +   + +   +V    L+E+ ++     I  AL  
Sbjct: 587 KIWNAFKLITSW---EVSETIEQPESSKIAIQWYEAVFQDKLRELEDHYSKYRISNALMT 643

Query: 417 VISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
              LV +     + +  KP   +  +     + +     +      +L  F+P +  +I+
Sbjct: 644 SYKLVWDDFCSWFLEIIKPGYEQPVDQKTLESAIA----LFEDNLKILHPFMPFITEEIW 699

Query: 475 DIL 477
             +
Sbjct: 700 HQI 702



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 50/161 (31%), Gaps = 18/161 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ERE   I           H+GH   + I DVL R  RL G +  +  GTD        
Sbjct: 30  VDEREPYSIVIPPPNVTGVLHMGHMLNITIQDVLVRRARLLGKNACWVPGTDHASIATEA 89

Query: 61  AAQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
                                      + D       +    L  S D      T +   
Sbjct: 90  KVVAKLKADGISKADLSREDFLKHAWEWTDDYGGRILNQLKKLGASCDWERTKFTLDDNM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +++    +  + +KG +Y+G     +    +   +D+EV  
Sbjct: 150 YESVVQSFIDLHNKGLVYRGYRMVNWDPEAKTTLSDEEVIY 190


>gi|319775102|ref|YP_004137590.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317449693|emb|CBY85900.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 924

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 335 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 394

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 395 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 454

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 455 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 514

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 515 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 569

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 570 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 627

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 628 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 682

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 683 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 742

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 743 LVRWMAPILSFTADEIWQHLPQTESARA 770



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 89

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 90  VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 150 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 209

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 210 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 255


>gi|298715272|emb|CBJ27921.1| Leucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 859

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + R K ++     YP+    H+GH      +DV+AR+ R+ G DVL   G D  G    +
Sbjct: 45  EGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMARYWRMKGFDVLHPMGWDSFGLPAEQ 104

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   KV    N   FR    +L  SY  D  + TT+K +    + ++ ++   G 
Sbjct: 105 HAILTGTHPKVTTYTNIDTFRRQLKMLGFSYDWDRELATTDKDYVKWTQWIFLELFKAGL 164

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +      +         ++E+  G          +PV       +  +++ Y D+L +
Sbjct: 165 AEQSEARVNWCPALGTVLANEEIIDGKS----ERGDHPVVRTPLRQWALKITKYADQLEA 220

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E        +  + + I   +
Sbjct: 221 GLEGLNWPDGTLTAQKQWIGRSE 243



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 109/354 (30%), Gaps = 64/354 (18%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           E    + +  +G D +    Q  PV   E       L   +               P  R
Sbjct: 477 EMVDPEGDPRRGDDHKICYDQPMPVDVSELP---LTLPEMESFEPGDDPQGCLTRAPDWR 533

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
                             R    +  +    PQ+    W               +    K
Sbjct: 534 F---------------FQRDGKWFARETNTMPQWAGSCWYYLRFTDTKNADAGWSKKADK 578

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKIS 304
               P DL+V G++    H +Y   +    +         P  + V     +   GEK+S
Sbjct: 579 DWM-PVDLYVGGQEHAVLHLLYARFWHKVLHDLGHVKDPEPFQRLVHQGMILGTDGEKMS 637

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNVI+P ++++  G DALR + +                 K    +   G+     R
Sbjct: 638 KSRGNVINPDDIVDSDGADALRLYEMFMGPL---------EATKPWQTEQVAGVTRFRDR 688

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              +  +  + +   P   T        +  + ++++ E++     + A++ ++ L    
Sbjct: 689 VYQLARRGAEDVELAPETLT--------ILHKTMKKVSEDIDELAFNTAISALMVL---T 737

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +     +KP                   E +  L  ++  F P L  + +D+L 
Sbjct: 738 NHLMTFEKPPR-----------------EALEALVRMVSPFAPHLGEECWDLLG 774


>gi|15618018|ref|NP_224302.1| valyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15835629|ref|NP_300153.1| valyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752950|ref|NP_445222.1| valyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241429|ref|NP_876370.1| valyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6226196|sp|Q9Z987|SYV_CHLPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4376354|gb|AAD18247.1| Valyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189594|gb|AAF38490.1| valyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8978467|dbj|BAA98304.1| alyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33235937|gb|AAP98027.1| valyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 940

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 81/416 (19%), Positives = 132/416 (31%), Gaps = 80/416 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +S ++  L  + ES    I P +     +S+V   L+D  +SR+   W
Sbjct: 355 IEPYLSKQWFVSVSEFRGALREFVESQDIKIFPKDFVKNYLSWVNH-LRDWCISRQ-LWW 412

Query: 217 GIKIP------------------------DDPQ------YIMYVWIDALTNYLTTTGYLD 246
           G +IP                         DP        ++  W  +    LT  G+ D
Sbjct: 413 GHRIPVWYHKNDDERVLCYDGEGIPEEVAQDPDSWYQDPDVLDTWFSSGLWPLTCLGWPD 472

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSH----------- 293
                  KF+P  L V G DIL F           +S   P   +VF H           
Sbjct: 473 ENSPDLKKFYPTALLVTGHDILFFWVTRMVLLCSSMSGEKPF-SEVFLHGLIFGKSYKRY 531

Query: 294 ------------------------GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                     ++ K EK+SKS GNVIDP+E+I   G DA+R  L
Sbjct: 532 NDFGEWSYISGKEKLAYDMGEALPDGVVAKWEKLSKSKGNVIDPLEMIATYGTDAVRLTL 591

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTES 386
                 G+    D    ++      AN + N        I               +    
Sbjct: 592 CSCANRGEQIDLDYRLFEE--YKHFANKVWNGARFIFGHISDLQGKDLLAGIDEDSLGLE 649

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  IL   ++++ ++ E        +                Y +  KP    K   + +
Sbjct: 650 DFYILDGFNQLIHQLEEAYATYAFDKVATLAYEFFRNDLCSTYIEIIKPTLFGKQGNEAS 709

Query: 445 STVLYVTVEVIRQ-LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            +     + V+   +  +L    P +   +F  L + D        D     G  L
Sbjct: 710 QSTKRTLLAVLLINVLGVLHPVAPFITESLF--LRIQDTLGALPEGDGDAFTGHAL 763



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 20/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    +           H+GHA    + DVL R+ R+ G +V +  GTD  G      
Sbjct: 35  SDKPPYSVIMPPPNVTGVLHMGHALVNTLQDVLVRYKRMSGFEVCWIPGTDHAGIATQAV 94

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                         + +++ +        L  S  +D    T E   
Sbjct: 95  VERHLQASEGKRRTDYSREDFLKHIWAWKEKSEKVVLSQLRQLGCSCDWDRKRFTMEPLA 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV 157
           +   +  +K + + G IY+G Y   +    +    DDEV Y+  DG  Y  ++  V
Sbjct: 155 NRAVKKAFKTLFENGYIYRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRMV 210


>gi|148238671|ref|YP_001224058.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147847210|emb|CAK22761.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 968

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 84/486 (17%), Positives = 151/486 (31%), Gaps = 53/486 (10%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAA--------QNAGVTTKVFVDQNSRNFRDMADVLD 88
           FH      +      DE G   A+A         ++A       ++Q     +  A    
Sbjct: 366 FHTGQKHGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPGIIEALEQAGALLKQEAYSHR 425

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
             YD   RT +          +  +                         + + K     
Sbjct: 426 YPYDW--RTKKPTIFRATEQWFASVEGFRQDALDAIDQVQWTPASGRNRIEAMVKERGDW 483

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             + Q     W      F+  S  +  L +   SH E ++     +      ++ L   +
Sbjct: 484 CISRQRT---WGVPIPVFYHRSNGEVLLNADTLSHIETLIAAHGGDVWWEKDEADLLPPA 540

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            + +   W           M VW D+ ++      +       ++  +PADL++ G D  
Sbjct: 541 YADQADQW-----RKGTDTMDVWFDSGSS------WAAVSSQRESLSYPADLYLEGSDQH 589

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------I 317
              F +    +  ++ + P  + +     +  KG K+SKSLGNV+DP+ +          
Sbjct: 590 RGWFQSSLLTSVAVNGHAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQE 649

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D LR ++           Y  D             +   V  +   +L +     
Sbjct: 650 PAYGADVLRLWVSS-------VDYSTDVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFN 702

Query: 378 PTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
           P   A         D  +L   + V+ EI E  ++    R    + +       + Y D 
Sbjct: 703 PATDAIAVEDLPLLDRWMLQRTAEVMDEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDI 762

Query: 431 QKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            K         D R  +   V   +I +LA L+   +  +A  I+  L    E     S+
Sbjct: 763 AKDRLYVSAPADRRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLPYPVEET---SV 819

Query: 490 DQRLKP 495
            QR  P
Sbjct: 820 FQRGWP 825



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N   H+GHA   ++ DV+ ++  L G  V +  G D HG  I      
Sbjct: 59  PTFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLQGRRVRYVPGWDCHGLPIELKVLQ 118

Query: 65  AGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           +    +               +  +             I   +D    T +K +      
Sbjct: 119 SMDQEQRQALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWDQPYLTLQKEYEAAQIK 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++  KG IY+G     +S        + E+  
Sbjct: 179 VFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEY 213


>gi|291287674|ref|YP_003504490.1| isoleucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884834|gb|ADD68534.1| isoleucyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 931

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 59/285 (20%), Positives = 109/285 (38%), Gaps = 15/285 (5%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           +     +D   +  T   G         I+ VW D+ T++                 WPA
Sbjct: 511 WFDRPNEDFIPAGTTCKCGGTRFSKETDILDVWFDSGTSHSAVLEER------DELSWPA 564

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           ++++ G D     FH+    +       P  + +     +  KG K+SKSLGN +DP E+
Sbjct: 565 NMYLEGSDQHRGWFHSSLLESVGSRGVAPYKEVLTHGFAMDGKGRKMSKSLGNTVDPKEI 624

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDG 375
           I + G + LR ++  E    +D    +D +++ V +     I N     +  I   + D 
Sbjct: 625 INKFGAEILRLWVSAEDY-TEDVRISQDIIQRLVES--YRKIRNTARYLLGNISDFNPDT 681

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
            +       + D   L    +V + I E   N   H      I+         Y D  K 
Sbjct: 682 DMVAFEDMLDLDRYALVRWQQVKKRIYEAYDNYQFHTFYHAFINFCIGDLSSFYLDILKD 741

Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                K +     +   V  +++R+++IL+   +   A++IF+ +
Sbjct: 742 RLYAYKYDSRERRSAQTVLFKMVREMSILMAPVLSFTADEIFEFI 786



 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 21/232 (9%)

Query: 2   KEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++   YI      Y N + HIGHA   I+ D++ +    +G    +  G D HG  I  
Sbjct: 44  RDKNNPYILHDGPPYANGEIHIGHAMNKILKDIIIKIKAFEGYYTPYVPGWDCHGLPIEH 103

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    K +    S   ++         D FI        D  R  + ++   GD Y
Sbjct: 104 KVDKKLGK-KKYEMSKSEIRKECRKYA----DKFI--------DVQRQGFIRLGGFGDWY 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
               +  Y    +     +E+Y+  D         PV W          +  +    +  
Sbjct: 151 NPYITMDYKYEAKTL---EELYRFFDNGGVYKGLKPVYWCTSCTTALAEAEVEYDNHTST 207

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF----DWGIKIPDDPQYIM 228
               +F +  E + +        +  +  +   +    + GI +  D +Y +
Sbjct: 208 SVFVKFPMKDEFKAKFGLAESDKVSAVIWTTTPWTLPANLGICVNADLEYSI 259


>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 921

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 132/351 (37%), Gaps = 34/351 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN+I P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIIVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N  
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
               +  V  +V+  L  L+   +P  A++++  +  V +E+    ++ + 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGVTEESVQLTNMPEA 785



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|254782368|sp|A9VTD5|SYI_BACWK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 921

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 128/341 (37%), Gaps = 33/341 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ ++++  +          + +   +     Y D  K    ++  +  
Sbjct: 675 VDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +  V  +V+  L  L+   +P  A++++  +  A+E 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGAEEE 775



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|70995972|ref|XP_752741.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus fumigatus
           Af293]
 gi|20145247|emb|CAD29604.1| isoleucyl-trna synthetase, putative [Aspergillus fumigatus]
 gi|66850376|gb|EAL90703.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus fumigatus
           Af293]
          Length = 1064

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGTL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  +++  G DALR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMQRYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 344 DG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSR 396
            G   +  +V   L N       ++      +    +  P A        D  IL+ C  
Sbjct: 641 SGVKEIVAKVLLPLWNSYKFFEGQAALFKKNNSIDFVFDPKAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGENGIDDTLHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F P + + I+  L
Sbjct: 761 YTLVRGLAPFTPFITDTIYQKL 782



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 90  IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRFASEWRETIERLGRWIDFDNDYKTMNSSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKQLFDKGLVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|321459407|gb|EFX70461.1| hypothetical protein DAPPUDRAFT_217307 [Daphnia pulex]
          Length = 973

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 139/449 (30%), Gaps = 106/449 (23%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + V+ M +  ++ +             S    ++P   +    S++   ++D  +
Sbjct: 365 CSRSKDIVEPMIKPQWYVKCDQMAADAAEAVRSGKLKVVPEMHQKTWFSWMD-NIRDWCI 423

Query: 210 SRKTFDWGIKIP------------------------------------------------ 221
           SR+   WG +IP                                                
Sbjct: 424 SRQ-LWWGHRIPAYFVTIDEPSAKVGDEADNEFWVSGRTEAEARTNAAKRFNVPEEKIIL 482

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
              Q ++  W  +     +  G+ D  D     F+P  L   G DIL F    + +    
Sbjct: 483 KQDQDVLDTWFSSALFPFSVFGWPDKTD-ELDVFFPTTLLETGHDILFFWVARMVFFGQK 541

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE--------------------- 318
           L   LP  +           G K+SKSLGNVIDP++VI                      
Sbjct: 542 LMGKLPFSEVYLHAMVRDAHGRKMSKSLGNVIDPLDVIYGISLDGLMAQLDGSNLDPAEV 601

Query: 319 ----------------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                           E G DALR+ L +  A G+D   D   ++        N + N  
Sbjct: 602 GRAKEGQKQDYPQGIPECGTDALRFALCQYTAQGRDINLDVKRVQG--YRFFCNKLWNAT 659

Query: 363 SRSVSMILKD-----YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
             +++ +         +       +    D+ ILS  S  +       Q     RA + +
Sbjct: 660 RFALTYLQGSEIHTLNEASNRPMISRPLMDKWILSCLSTAVSACNAGFQQYDFPRATSAI 719

Query: 418 ISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +       D Y +A KP   +  +    S    V V  I     L+  F+P ++ +++ 
Sbjct: 720 YNFFLYELCDVYLEAVKP-IFQGLDESAKSAARSVLVTCIDTGLKLISPFMPFISEELWQ 778

Query: 476 ILFVADENRCFQSLDQRLKPGFMLHKTFD 504
            L         +S+ + L P   +     
Sbjct: 779 RLPRP------ESVQKTLPPSICIAPYPT 801



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    + D + R+HR+ G   L+  G D  G       +   
Sbjct: 41  FVMVIPPPNVTGSLHLGHALTNSVEDTITRYHRMTGKTTLWVPGCDHAGIATQVVVEKKL 100

Query: 67  V---------------TTKVFVDQNSRNFR--DMADVLDISYD--DFIRTTEKRHHDTCR 107
                             KV+  +N +  R  +    +  S D      T + +      
Sbjct: 101 WREEKINRHDLGREKFIEKVWEWKNEKGHRIYEQLKKMGSSLDWNRASFTMDPKLCKAVL 160

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             +  +   G IY+      +S   ++  +D EV
Sbjct: 161 EAFVTMHQDGTIYRSTRLVNWSCTLKSAISDIEV 194


>gi|254574080|ref|XP_002494149.1| isoleucine-tRNA synthetase [Pichia pastoris GS115]
 gi|238033948|emb|CAY71970.1| Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific
           inhibitor reveromycin A [Pichia pastoris GS115]
 gi|328354032|emb|CCA40429.1| isoleucyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 1072

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y        +  +PAD    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYAQNHYPFEGKDEFSSKFPADFISEGLDQTRGWFYTLTVLGTHLFN 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + S   +   G+K+SK L N  DP  V++  G DALR +L+       +   +
Sbjct: 583 TAPYKNVIVSGIVLAGDGKKMSKRLKNYPDPGIVLDGYGADALRLYLINSPVLRAETLKF 642

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSR 396
            ++G+K+ V+  L     +        ++   L   D    P   +    D+ +L+    
Sbjct: 643 KEEGVKEVVSKVLLPWWNSFKFLEGQVALLKKLNQIDYKYDPEVRSENVMDKWLLATIQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ I + M    ++  + +++ L+ ++ + Y    +     +   D     L    E +
Sbjct: 703 LIKFIHQEMAEYRLYTVVPKLLKLIDDLTNWYIRFNRRRLKGENGVDDCIKALNTLTEAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   +  F P L+  I+  L
Sbjct: 763 FTLVRAMAPFTPFLSENIYQRL 784



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  ++        +    PH GH     I D++ R+  ++G+ V    G D HG  +   
Sbjct: 35  EGNKRFSFYDGPPFATGTPHYGHILASTIKDIIPRYANMNGMYVERRFGWDTHGLPVEHE 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  ++D    L   I +++  +T     
Sbjct: 95  IDKKLGITGKEDVMAMGIAKYNEECRSIVMRYAHAWKDTIGRLGRWIDFENDYKTLYPEF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ +K  +Y+G     YS       ++ E  +   
Sbjct: 155 MESVWWVFKQLYEKDSVYRGLRVMPYSTGCTTPLSNFEAQQNYK 198


>gi|15897784|ref|NP_342389.1| valyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284175587|ref|ZP_06389556.1| valyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|74542081|sp|Q97ZK9|SYV_SULSO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13814075|gb|AAK41179.1| Valyl-tRNA synthetase (valS) [Sulfolobus solfataricus P2]
          Length = 842

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 16/269 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           +  VWID+    L  T + ++ +    + +PA L + G DI+R    Y  +   +L+ N+
Sbjct: 496 VADVWIDSSVTVLYLTKFYEDKNV-FNRTFPASLRLQGTDIIRTWLFYTFFRTLMLANNV 554

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G ++SKS GNV+ P++ + + G DA+R  L+ + + G D  +  D
Sbjct: 555 PFTTVLVNGQVLGPDGTRMSKSKGNVVSPLDRVNDFGADAIRMALL-DASIGDDFPFKWD 613

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K +    L   + N        I K     +  P +    D+ IL    + + +    
Sbjct: 614 IVKGKKM--LLQKLWNASRLVYPFIAK---QRLDKPKSLHIVDKWILQEHKKFVTKAINA 668

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +N   +  L ++ +   E   D Y +  K       N  +     Y    +IR + ILL
Sbjct: 669 YENYDFYLVLQELYNYFWEIVADEYLEMIKHRLFDDDNSAK-----YTIQRIIRDIIILL 723

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
               P +  +I+  LF   ++   + L +
Sbjct: 724 HPIAPHITEEIYSRLFGHKKSVLLEELPK 752



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 14/153 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       Q 
Sbjct: 77  PRFVIDTPPPFTSGELHMGHAYWVTIADTIGRFKRLEGYNVLLPQGWDTQGLPTELKVQY 136

Query: 65  AGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRILW 110
                K            + ++  +  ++    L     ++ F  +T E ++    +   
Sbjct: 137 KLGIPKDNRQLFLQKCIEWTEEMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQKSL 196

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +     I        +  + E      EV  
Sbjct: 197 IDMYKMNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|329122984|ref|ZP_08251555.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327471915|gb|EGF17355.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 941

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|317418825|emb|CBN80863.1| 'Isoleucyl-tRNA synthetase, cytoplasmic' [Dicentrarchus labrax]
          Length = 1158

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/459 (12%), Positives = 143/459 (31%), Gaps = 26/459 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G   ++    AG   K       +  ++   +++ S       + K ++  C 
Sbjct: 239 ICPVDASGCFTSEVTDFAGQYVKDADKNIIKWLKEKGRLVNAS-------SFKHNYPFCW 291

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D+ Y+  + V +   G +     +       
Sbjct: 292 RSDTPLIYKAVPSWFVRVEHMVEKLLDNNDKCYWVPEFVREKRFGNWLRDARDWAISRNR 351

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      +V    +  + +L++       G  +  
Sbjct: 352 YWGTPIPLWVSDDFEEVVCVGSMAELEELTGVKVTDLHRESIDNLTIPS---RCGKGVLR 408

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   +  L
Sbjct: 409 RLTEVFDCWFESGSMPYAQVHYPFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTAL 468

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP  +++  G DALR +L+       ++ 
Sbjct: 469 FGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENL 528

Query: 340 FYDKDGLKKRVNADLANGI--GNLVSRSVSMILKDYD-----GMIPTPGAFTESDESILS 392
            + ++G++  +             + ++V  + K+ D            +    D+ I S
Sbjct: 529 RFKEEGVRDVLKDVFLPWYNAYRFLVQNVQRLQKEDDIKFLYNENTPKQSDNIMDKWIQS 588

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++Q  +  M+   ++  + +++  V    + Y    +     ++  +     +   
Sbjct: 589 FTQSLIQFFKAEMEAYHLYTVVPRLVKFVDMLTNWYVRTNRRRLKGESGIEDCLWAMETL 648

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             V+  +  L+  F P +   ++  L    +    +  D
Sbjct: 649 FSVLFSMCRLMAPFTPFITEMMYQNLRHLIDPASVEEKD 687


>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 921

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 132/351 (37%), Gaps = 34/351 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N  
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
               +  V  +V+  L  L+   +P  A++++  +  V +E+    ++ + 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGVTEESVQLTNMPEA 785



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|159131496|gb|EDP56609.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus fumigatus
           A1163]
          Length = 1064

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGTL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  +++  G DALR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMQRYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 344 DG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVCSR 396
            G   +  +V   L N       ++      +    +  P A        D  IL+ C  
Sbjct: 641 SGVKEIVAKVLLPLWNSYKFFEGQAALFKKNNSIDFVFDPKAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGENGIDDTLHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F P + + I+  L
Sbjct: 761 YTLVRGLAPFTPFITDTIYQKL 782



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 90  IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRFASEWRETIERLGRWIDFDNDYKTMNSSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKQLFDKGLVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|262089308|gb|ACY24529.1| valyl-tRNA synthetase [uncultured crenarchaeote 57a5]
          Length = 781

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 134/414 (32%), Gaps = 39/414 (9%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--------VQ 158
           + +   + +   + K           E   +  E+    D      +  P        ++
Sbjct: 318 KKIIDDLKNNDYVEKEETILHRIPMCERSKSPVEIVPMQDYYIKQLEFLPKLREFSSTLK 377

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK----------DLS 208
           +  E       +      + +  S   F           +  +  L           D +
Sbjct: 378 FYPEAHRQILFNWLDSVAIDWPVSRRRFYGTEIPIWYCDNCKEPILPEPGKYYRPWKDKA 437

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              K    G       +     W+D+  + L  T Y  + D    K +P  +    KDI+
Sbjct: 438 PVDKCVKCGFDKFTGDERTFDTWMDSSISPLFITKYNRDEDF-FVKTFPTQIRPQAKDIV 496

Query: 269 RFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
           R    Y     + L+ NL   +       +   GEK+SKS GNVIDP  +I + G D  R
Sbjct: 497 RTWLYYTMLRCYQLTENLAWSEVWIMGYGVDEYGEKMSKSKGNVIDPFPIITKHGADTFR 556

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           ++   E   G+D    +  + +         + N+     S     ++ +         S
Sbjct: 557 FWSATEANHGQDFRCSEQKIVEAQ--KFLTKLWNIGRFVSS-----FEFIPSHESDLLPS 609

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA 444
           D+ IL+  S ++ E     +        + +           Y +  K       + D  
Sbjct: 610 DKWILAELSNLITECMRGYKEYNFFIPASHIREFTWNIFASHYLELVKSRAYNDNDSDSR 669

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF---------VADENRCFQSL 489
           ++ LY   +    + +LL    P + +K++  ++         + DEN  ++ +
Sbjct: 670 NSALYALHKCFSVILLLLAPICPFITDKLWTTIYDKESIHLNKLPDENNDYEDM 723



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 16/159 (10%)

Query: 1   MKEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++    I T   YP+ +P HIG A      D++AR  R+ G +V F  G D +G  + 
Sbjct: 32  VSDKNNFVIDTPPPYPSGRPWHIGAAAHYAQIDMIARTARMFGKNVFFPIGIDRNGLPVE 91

Query: 60  KAAQNAGVTTKVFVDQN-------------SRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
              +           +               +    +   + +S  ++++ RT    +  
Sbjct: 92  IYTEKKHKIRMRQTHREEFLNLCRISLDDLEKEMIQIMKSIGLSANFEEYYRTDSIEYRT 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +  +  KG +Y       Y         D E+  
Sbjct: 152 LTQSTFLYLWKKGLVYSSNRPNNYCPSCGTTIADAEITY 190


>gi|257063800|ref|YP_003143472.1| isoleucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791453|gb|ACV22123.1| isoleucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 952

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 72/470 (15%), Positives = 141/470 (30%), Gaps = 36/470 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAA----------QNAGVTTKVFVDQNSRNFRDMADV 86
           +      DV      D++G                 +      K+    + R    + + 
Sbjct: 349 YKAGMKFDVPVIMPVDDNGCFYVGDTIGFGGPFSGMEVNEANPKIIEWLDERGMLILHED 408

Query: 87  LDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ SY    R             +  + + G   K     +  +    +Y +  V +   
Sbjct: 409 INHSYPHCWRCHRPVIFRATNQWFVSMDETGLREKALDQIYNHV---DFYPEWGVNRIGA 465

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL-SYYESHPEFILPIERRNE---VISFVKS 202
                          +  +   +  ++             F   I+  N       F K 
Sbjct: 466 MVTDRPDW---CISRQRSWGVPIPVFKCGDCGETIADEATFDAVIDLFNNEGADAWFTKE 522

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
            ++ L  +      G +     + I+ VW ++  +++    +    D  +   WPAD+++
Sbjct: 523 PVEYLPETTCCPKCGSRNIQPEKDILDVWWESGVSHVGVLQHRAEADHLR---WPADMYL 579

Query: 263 IGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G D     F +            P    V     +   GEK+SKS GN IDP +V +  
Sbjct: 580 EGSDQHRGWFQSSLLLGTGAFGQSPYKSVVCCGFTVDENGEKMSKSKGNGIDPKQVADAY 639

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-- 378
           G D LR ++                   +  +D      N   R +   L D+D M    
Sbjct: 640 GADVLRLWVASTDYS---VDVSIGDTILKRTSDAYRRFRNSF-RFLLGNLSDFDDMRDAV 695

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL 436
                   D   +   + VL E+         H+    +   V       Y D  K   L
Sbjct: 696 ALEDMKPIDVWAMLRLAEVLAEVERGYDEYRFHQVFRVLYDYVITDLSAIYMDVAKD-RL 754

Query: 437 KKTNPDRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
               P   +  +   V + ++  L  ++   +    +++++    A  NR
Sbjct: 755 YSEAPGSLARRSAQTVLMNILEVLVRVMSPILSFTCDEVWEHYPEAARNR 804



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 16/161 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ E   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 47  KDGEPFILHDGPPYANGPIHIGHAFNKILKDFVVKSHAQRGYFTPYIPGWDCHGQPIEHE 106

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDT 105
            +    T K               + ++     RD    L ++ D F    T        
Sbjct: 107 VEKKLGTEKMNQLPQATIRRLCHEWAEKFVDVQRDGFMRLGVNADWFNPYLTFMPTFESA 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++KK+   G +Y+G     +         + E+  G +
Sbjct: 167 NVEVFKKLYLDGAVYRGRKPIHWCSHCHTALAEAEIEYGDE 207


>gi|213971606|ref|ZP_03399715.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301382008|ref|ZP_07230426.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058349|ref|ZP_07249890.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|213923635|gb|EEB57221.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 499

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 131/391 (33%), Gaps = 40/391 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV   V   +NS         ++I  D+++R             ++  + D G     D
Sbjct: 63  QGVDPVVLAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAKAVGEVFTALRDAGAIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+      Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L +                  +      L D  ++R   D G+ 
Sbjct: 183 KTAHRAFLKLADFKPQLGNRLLGQAWRKPLDSW----LRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQVDGACRVHTWFMGLAGYMAAFREYADSIGRPELFGQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA   +   + + ++   + F+   G  +S S  + I   ++  +   D+ R +L  
Sbjct: 298 IVYPAQLSVLQGIKVRQRFVPNQFLKLDGLNLSTSRNHAIWVGDLARQACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                 +G +      +    +L NG    +
Sbjct: 358 IAPEDSEGDFRMTHFLE-WREELFNGFFPAL 387


>gi|229061501|ref|ZP_04198845.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717735|gb|EEL69385.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 921

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 127/341 (37%), Gaps = 33/341 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +   G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ ++++  +          + +   +     Y D  K    ++  +  
Sbjct: 675 VDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +  V  +V+  L  L+   +P  A++++  +  A+E 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGAEEE 775



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|229134705|ref|ZP_04263514.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648751|gb|EEL04777.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 921

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 127/341 (37%), Gaps = 33/341 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 508 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +   G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFNPSENTVPVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ ++++  +          + +   +     Y D  K    ++  +  
Sbjct: 675 VDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
               +  V  +V+  L  L+   +P  A++++  +  A+E 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGAEEE 775



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + RF  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|154505745|ref|ZP_02042483.1| hypothetical protein RUMGNA_03285 [Ruminococcus gnavus ATCC 29149]
 gi|153793763|gb|EDN76183.1| hypothetical protein RUMGNA_03285 [Ruminococcus gnavus ATCC 29149]
          Length = 810

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++EK Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G     
Sbjct: 34  EKKEKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAEN 93

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV       +N  N +   +       +D  + TT+   +   + ++ K+  +G 
Sbjct: 94  YAIKMGVHPAKSTAENVANIKRQINEIAALYDWDMEVNTTDPNFYKWTQWIFVKMFKEGL 153

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+  +   +    +    ++EV  G            V       +  R++ Y D+LL+
Sbjct: 154 AYEKEFPINWCPSCKTGLANEEVVNGK----CERCGTDVTKKNLRQWMLRITKYADRLLN 209

Query: 179 YYESHPEFILPIERRNEVI 197
             +         + + + I
Sbjct: 210 DLDKLDWPEKVKKMQADWI 228



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 123/348 (35%), Gaps = 60/348 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+      +        + + + ++   GI+
Sbjct: 420 YKLRDWVFSRQRYWGEPIPIVHCPECGAVPVPEEELPLRLPDVDSYEPTGTGESPLAGIE 479

Query: 220 IPDDPQ------------YIMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
              + +              M  W    +++        + D          +  P D++
Sbjct: 480 EWVNCKCPVCGKDAKRETNTMPQWA--GSSWYFLRYVDSHNDKELVSREKADEMLPVDMY 537

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G K+SKS GNV+ P
Sbjct: 538 IGGVEHAVLHLLYSRFYTKFLHDIGVVDFDEPFHKLFNQGMITGKNGIKMSKSKGNVVSP 597

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +++ + G D+LR + +       D  +D  G+         +G+   + R  ++++   
Sbjct: 598 DDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKRLWNLLMD-- 646

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                +     ++ + ++    R++ +I   +++  ++  ++  +      +++ +  K 
Sbjct: 647 -----SKENEVQATKEMIKQRHRMVADITMRLESFSLNTVISGFMEYN---NKFIEIAK- 697

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
              K+   D+         E +  +A+LL  F P  A +I++ L   +
Sbjct: 698 ---KEGGIDK---------ETLETIAVLLSPFAPHFAEEIWEQLGHTE 733


>gi|86159149|ref|YP_465934.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775660|gb|ABC82497.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 858

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA
Sbjct: 59  DADTRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGFDALGLPAENAA 118

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N  +FR     L  S+  D  + T +  ++   +  + K+ +KG  Y
Sbjct: 119 IKDGRHPAERTRENVVSFRAEMKRLGYSFDWDRELVTADASYYRWNQWFFLKMLEKGIAY 178

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V    D        +PV       + FR++AY  +LL   
Sbjct: 179 RRQGKVNWCTGCQTVIANEQV---VDDNRCERCGSPVVEKIHPEWAFRITAYAQQLLDGL 235

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   +            G
Sbjct: 236 DGLKDWPDRVTTMQRNWIGKSEG 258



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 58/373 (15%), Positives = 127/373 (34%), Gaps = 50/373 (13%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI------SFVKSGLKDLSLSRKT 213
                + F    Y    +         ++P+  ++  +          +G   L+     
Sbjct: 449 WHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVASF 508

Query: 214 FDWGIKIPDDP----QYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGK 265
            +        P       M  ++D+   Y             D   A+ W P D++V G 
Sbjct: 509 VNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPKDEARPFDPEAARRWLPVDVYVGGP 568

Query: 266 DILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y+  +            + P+ + V         G K+SK  GNV+ P  ++
Sbjct: 569 EHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGGMV 628

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YD 374
              G D +R F++      KD  +  + +         +G+   ++R   +       +D
Sbjct: 629 SRFGADTVRMFMLFAAPPEKDIDWSDEQV---------DGLFRFLARVWRIYFARQACFD 679

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKP 433
                          +     R ++ + E ++     + ++A ++ LV+ +  +    +P
Sbjct: 680 ASDAALAEAAGEALELRRRTHRTVKRVTEGLEADLKFNTSIAALMELVNALYAF----EP 735

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQ- 491
                + PDRA+       E +  L+ LL  F P +A +++ +++  A  +R        
Sbjct: 736 ----ASEPDRAA-----VREALLALSTLLAPFAPHVAEELWHEVMGPAARDRLVADAPWP 786

Query: 492 RLKPGFMLHKTFD 504
              P  ++  T  
Sbjct: 787 AFDPALIVADTVT 799


>gi|292655697|ref|YP_003535594.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371634|gb|ADE03861.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 1043

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 16/289 (5%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G+     P  +  VWID+      T  +    D +  + WPADL +   D     F +  
Sbjct: 517 GVTYERVPD-VFDVWIDSSVATWGTLDFPGETD-AYDELWPADLIIEAHDQTRGWFWSQL 574

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                 +   P  + +         G K+SKS+GN++ P E I+  G D LR +L+    
Sbjct: 575 GMGTAATGESPYKEVIMHGFANDKDGRKMSKSVGNIVTPEEAIDRAGRDPLRAYLLSHDQ 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPT--PGAFTESDESIL 391
            G D  ++ DGL    +    N   N+    +  M L  YD        G  T  DE +L
Sbjct: 635 QGVDLSFEWDGLADTQST--LNIFWNVFRFPLPYMDLDGYDPAEADLSAGELTVVDEWVL 692

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRAST--VL 448
           S    V  E+ +   +  +  AL  ++  +  +V R++  +   E      D AS     
Sbjct: 693 SRLQTVEAEMADAWDDYEVSTALNTLLDFITKDVSRFY-VKAIRERMWDEEDSASKLGAY 751

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN---RCFQSLDQRLK 494
                V+ +   L+  + P +A +++  L  ++       +   D+ L+
Sbjct: 752 ATLSTVLSESIRLIAPYAPYMAERMYQRLDGSETTVHMLSYPEADEELR 800



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 67/212 (31%), Gaps = 19/212 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +    +      Y + Q H+G A+   + D + R  R+ G  V    G D HG  I    
Sbjct: 36  DDPSFFFVDGPPYTSGQMHLGTAWNKTLKDAVIRHKRMTGQQVTDRPGYDMHGLPIEVKV 95

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       K F  +N     +    +   + +D+  +T    + 
Sbjct: 96  EEELGFTSKRDIEEFGMEQFIQKCKEFAVRNREAMDEDFQSIGAWMDWDNPYQTLSPEYM 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           ++    + K+++ G + +G  S  Y  R +     +EV              P++  E  
Sbjct: 156 ESAWWAFSKVAENGLVEQGKRSVNYCPRCQTAIAANEVEYDEITSPSIYVKFPLKGREGN 215

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
              +  + +     ++     E      R  +
Sbjct: 216 LVIWTTTPWTIPANTFVAVDGEMTYQEVRAEK 247


>gi|188524541|ref|ZP_03004531.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273657|ref|ZP_03206192.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195659580|gb|EDX52960.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198249685|gb|EDY74466.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 806

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 4/181 (2%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +K Y+     YP+ +  H+GH       DV++RF RL+G DVL   G D  G    + A 
Sbjct: 31  KKFYVLDMFPYPSGKGLHVGHPKGYTATDVISRFKRLNGYDVLHPIGWDAFGLPAEQYAL 90

Query: 64  NAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   F  QN + FR        D  YD  + TT+ + +   + ++ ++        
Sbjct: 91  ETNNHPHTFTQQNIKIFRKQLQMIGFDFDYDKEVDTTDPQFYQWTQWIFVQLYKHNLAEI 150

Query: 122 GCY-SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                 W         N++ V    + +      +PV     + +  ++  Y DKLL   
Sbjct: 151 QDIDVNWCENLGTVLSNEEVVLNDKNERVSERGGHPVVRKPMKQWVLKIVDYADKLLDGL 210

Query: 181 E 181
            
Sbjct: 211 N 211



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 61/359 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF-----ILPIERRN-EVIS 198
            D    N     V   +   + F    Y  +                 LP+   N +   
Sbjct: 397 NDYLVKNHLAKKVVNYKLRNWIFSRQRYWGEPFPVLFDENNQIKIIEDLPVLLPNLDEFK 456

Query: 199 FVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYVWIDALTNYL-----------TTTGYL 245
             K+G   L+ +++     I  K        M  W    + Y             T    
Sbjct: 457 PSKTGESPLANAQEWLYVEIDGKKYRRETNTMPQWA-GSSWYFLAYILKNEDGSYTPLNS 515

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFIL 297
           +      AK+ P D+++ G++    H +Y   +         +    P  K +     + 
Sbjct: 516 EEAKKRFAKWLPVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKVINQGMILG 575

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLAN 356
              EK+SKS GNVI+P ++I   G D LR + +          +  DGL   R   D   
Sbjct: 576 ENNEKMSKSKGNVINPDDIIASHGSDTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVY 635

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + + +S             +       + +E I+     +++   + +  Q  + A+++
Sbjct: 636 RLYHNLS------------ELEVVEDVNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISE 683

Query: 417 VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++  V+             L K           +  +++    ILL  F P LA +++ 
Sbjct: 684 MMVFVN------------VLYKNK--------VINYKLLDNFLILLSCFAPHLAEELYS 722


>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 921

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 132/351 (37%), Gaps = 34/351 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 621 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 674

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N  
Sbjct: 675 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHA 734

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
               +  V  +V+  L  L+   +P  A++++  +  V +E+    ++ + 
Sbjct: 735 DRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGVTEESVQLTNMPEA 785



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|227892921|ref|ZP_04010726.1| leucine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865259|gb|EEJ72680.1| leucine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 804

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V   QN  NF++  + L  SY  D  + T++ +++   + +++++   G  
Sbjct: 88  ALKTGEDPAVVTKQNIANFKEQLNKLGFSYDWDREVTTSDPKYYKWTQWVFEQMYKNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 L-DGLDWPEPVKEMQRNWIGRSVG 226



 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 135/419 (32%), Gaps = 56/419 (13%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            +            ++ +    K           +   N          Q Y  +  PV 
Sbjct: 370 TEDGPHINSEFLNGLNIEDAKKKMVDWLEDHNCGKKKVNYKLRDWDFSRQRYWGEPIPVI 429

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             E+                         LP     +     +S L +L+      D   
Sbjct: 430 HWEDGETTLVPED-----------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNG 478

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIY 274
           +        M  W  +   YL      +N    D    K W P DL++ G +    H +Y
Sbjct: 479 RKGKRETNTMPNWAGSSWYYLRYVDPHNNKELADYDLLKQWLPVDLYIGGAEHAVRHLLY 538

Query: 275 WPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              +         +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR
Sbjct: 539 ARFWHKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLR 597

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTE 385
            + +          +D +G                + R   + + D D   IP      +
Sbjct: 598 MYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDK 648

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +D  +  V +  ++++ E+      + A++Q++  V+                    +A 
Sbjct: 649 NDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFVNAA-----------------QKAK 691

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           ++     E       LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 692 SIPR---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|194224993|ref|XP_001491171.2| PREDICTED: similar to Isoleucyl-tRNA synthetase, cytoplasmic
           (Isoleucine--tRNA ligase) (IleRS) (IRS) [Equus caballus]
          Length = 1262

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 68/483 (14%), Positives = 150/483 (31%), Gaps = 39/483 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +   D   V    G  +           +G  T    D   +  +D          + IR
Sbjct: 327 YFGADDYRVCMDFGIIQKDSLPICPVDASGCFTAEVTDFMGQYVKDADK-------NIIR 379

Query: 97  TTEKRHHDTCRILWKKISDKGDIYK----GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           T ++         +                     + +R E     D++ +  D  Y+  
Sbjct: 380 TLKEHGRLLVASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMV--DQLLRNNDLCYWVP 437

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           +   V+      +      +      Y+ +     +  +    V     + L++LS ++ 
Sbjct: 438 EF--VREKRFGNWLKDARDWAVSRNRYWGTPIPLWVSDDLEEVVCVGSMAELEELSGAKI 495

Query: 213 TF-------------DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD 259
           +                G         +   W ++ +       Y         + +PAD
Sbjct: 496 SDLHRESIDHLTIPSRCGKGSLHRISEVFDCWFESGSMPYAQVHYPFESKREFEEAFPAD 555

Query: 260 LHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
               G D     F+ +   A  L    P    + +   +   G+K+SK   N  DP+ VI
Sbjct: 556 FIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSVI 615

Query: 318 EEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDY 373
            + G DALR +L+       ++  + ++G++  +   L    N     +   + +  ++ 
Sbjct: 616 HKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNILRLQKEEE 675

Query: 374 DGMIPTPGAFTES----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYF 428
              +       ES    D  +LS    +++  +  M    ++  + +++  V    + Y 
Sbjct: 676 MEFLYNENTVKESANITDRWVLSFMQSLVEFFKAEMAAYRLYTVVPRLVKFVDVLTNWYV 735

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              +     +   +     L     V+  L  L+  + P L   ++  L +  +    Q 
Sbjct: 736 RMNRRRLKGENGMEDCVLALETLFSVLLSLCRLMAPYTPFLTEMMYQNLKMLIDPVSVQD 795

Query: 489 LDQ 491
            D 
Sbjct: 796 KDT 798



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K R K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHRPKYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++ +   L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKMGIVEYNNQCRAIVMRYSTEWKSIVTRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|283457922|ref|YP_003362525.1| valyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133940|dbj|BAI64705.1| valyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 910

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 11/259 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLL 280
           DP  ++  W  +       TG+  NPD   AK +P DL   G DI+R         A  L
Sbjct: 521 DPD-VLDTWATSSLTPQIATGWGVNPD-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           ++++P      S   +    +K+SKS GNV+ P EV+E+ G DA+RY+       G D  
Sbjct: 579 ASSVPWYNTALSGWILDPDRKKMSKSKGNVVVPNEVLEKYGSDAVRYW-AASARLGADTA 637

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRV 397
           YD+  +K  +   LA  + N     +++   +   +             D S+L+  + +
Sbjct: 638 YDEGQMK--IGRRLAIKLLNASKFVLNLGATEKSVITSQAQGRVLINALDRSLLARLAYL 695

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++E     +     RAL    S      D + +  K         +  ++VL      + 
Sbjct: 696 IEEATAAFEKYEYARALQICESFFWSFTDDFVELIKDRAYGARGEEEQASVLAALATTLD 755

Query: 457 QLAILLQAFVPKLANKIFD 475
            L  L   F+P +  +I+ 
Sbjct: 756 ALLRLFAPFLPFVTEEIWS 774



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 16/138 (11%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREQVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMTGKNVFYPLGWDDNGLPTER 104

Query: 61  AAQNA---GVTTKVFVDQNSRN------------FRDMADVLDISYDDFIRTTEKRHHDT 105
             QN         V  + + R+             R  A    IS ++FI   E+   + 
Sbjct: 105 RVQNYYGVLCDPSVADNDSFRDLITWKADGTPKPDRSQAKWPRISRNNFIELCEELAVED 164

Query: 106 CRILWKKISDKGDIYKGC 123
            ++     +  G      
Sbjct: 165 EKVFENLFTTLGLSVDWS 182


>gi|156096647|ref|XP_001614357.1| tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803231|gb|EDL44630.1| tRNA ligase, putative [Plasmodium vivax]
          Length = 535

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 2/232 (0%)

Query: 249 DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
                K W  ++ +IGKDIL+FH + +   L S +L LPKK+  HG I  +  K+SK++G
Sbjct: 278 FRLFQKAWNPEVQIIGKDILKFHGVLYICLLQSLHLKLPKKILCHGLIKSENVKMSKTIG 337

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVI P +++++   D +R +        +D  + K  L +     + N +GNL+ R VS+
Sbjct: 338 NVISPFDIVQKYDTDIVRLYFFGCANIFEDKNFKKTHL-ESFQLFVRNNVGNLIYRVVSL 396

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
            +      I   G     +  IL  CS   Q++   + N+     L  +++L+ +V+++F
Sbjct: 397 CVDSNYLNIFQIGETDFLESPILRQCSESKQKLVALIHNREFPLFLENLMTLIKQVNKFF 456

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             ++PW+    +  R + ++Y T+E I+ +++ L   +P + + I   + + 
Sbjct: 457 VHREPWKCT-DDSVRFNRIIYETLEGIKFVSVFLYPIMPHICSSILRNIGLD 507



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 5/188 (2%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
            DEHG KI + ++   ++    V+  S  ++ M   L +  + F RTT + H    + +W
Sbjct: 1   MDEHGLKIERKSKKLEISIAEHVNNMSSYYQMMNQKLHVHVNIFYRTTSQFHKSFVQQVW 60

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K +++ G IYKG Y G+Y + +E Y N+ E+ +           + +   EE  YFF + 
Sbjct: 61  KYLAENGYIYKGTYRGYYDVNEEKYLNEFELKQKRK-----NDPSVLYIEEENSYFFNIL 115

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +++ L   Y+   E I P   + E++ FV   LKD+ +SR    WGIKIP + +  +YV
Sbjct: 116 KFKNFLTDLYQRSEEVIYPSYLQKEMLHFVNHELKDVCISRYNTQWGIKIPGEEKGTIYV 175

Query: 231 WIDALTNY 238
           W DAL +Y
Sbjct: 176 WFDALLSY 183


>gi|311280993|ref|YP_003943224.1| isoleucyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750188|gb|ADO49940.1| isoleucyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 938

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/401 (15%), Positives = 128/401 (31%), Gaps = 46/401 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V     G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKSPIIFRATPQWFVSMDQKGLREQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ------ 225
           +          + +P+      E      + L+ +    K  +  GI+   D        
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETQELHPNTLELMEEVAKRVEVDGIQAWWDLDSRDILG 518

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + + +         G       AD+++ G D     F + 
Sbjct: 519 ADADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA-----ADMYLEGSDQHRGWFMSS 573

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++    
Sbjct: 574 LMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTD 633

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
             G+    D+  + KR     A      +  +   +L + +G  P      P      D 
Sbjct: 634 YTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPVKDMVKPEEMVVLDR 686

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
             +       ++I +  ++   H  + +++   S      Y D  K  +   K       
Sbjct: 687 WAVGCAKAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYLDIIKDRQYTAKAESVARR 746

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 SCQTALFHIAEALVRWMAPIMSFTADEIWGYLPGDREQYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRADFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFHAVDQDAVKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S+    +     +   + LP  R
Sbjct: 226 FGVSSVNGPVSLVIWTTTPWTLPANR 251


>gi|167464567|ref|ZP_02329656.1| isoleucyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 922

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 107/291 (36%), Gaps = 26/291 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G +     + IM VW D+ +++    G            WPADL++ G D     F
Sbjct: 510 CPNCGHEEFTKEKDIMDVWFDSGSSHAAVLG------QRNELSWPADLYLEGSDQYRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++       +    P    +     +  +G K+SKS+GN IDP +V E++G D LR ++ 
Sbjct: 564 NSSLITGVAVKEEAPYKGVLSHGFTLDGEGRKMSKSIGNTIDPNQVCEKLGADILRLWVA 623

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
                 +D       L      +    +   +  ++  +L +     P           E
Sbjct: 624 SVDYQ-QDHRVSDKIL------NQITEVYRKIRNTLRFLLGNLSYFNPVTDKVPVEQMEE 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNP 441
            D       +R+++++         H     +     V     Y D  K         +P
Sbjct: 677 LDRYAYIRLNRMIEKVVRAYDAYEFHLVYQTIHHFCAVEMSSFYLDIIKDRLYANSPDDP 736

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-VADENRCFQSLDQ 491
            R ++   V  E +  +  L+   +P  A++++  +  V++E+     L +
Sbjct: 737 ARKAS-QTVMYETLLAITKLIAPILPHTADEVWSYIPEVSEESVQLAILPE 786



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N   HIGHA   ++ D + RF  + G D  +  G D HG  I +A
Sbjct: 45  EGKPKFILHDGPPYANGDIHIGHALNKLLKDFIIRFKTMQGYDAPYVPGWDTHGLPIEQA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
             N+                 K +  +     ++    L +  D      T +  +    
Sbjct: 105 IANSGKVDRKQMSVPEFREYCKEYAMKWVEKQKEQFIRLGVRGDWEHPYITLQPEYEAEQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             L+ K+  KG IYKG    ++S   E+   + E+   
Sbjct: 165 IRLFGKMVRKGYIYKGLKPVYWSPSSESALAEAEIEYR 202


>gi|312864585|ref|ZP_07724816.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
 gi|311099712|gb|EFQ57925.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
          Length = 935

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 108/302 (35%), Gaps = 18/302 (5%)

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
               +    L     S      G         IM VW D+ ++      +    +  +  
Sbjct: 498 IWWDWEAKDLLPAGFSHPGSPNG--QFTKETDIMDVWFDSGSS------WNGVMNQREGL 549

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +PADL++ G D     F++    +  ++ + P    +     +  KGEK+SKS GN+I 
Sbjct: 550 GYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKSKGNIIS 609

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P +V ++ G + LR ++        D     + L +   ++    I N +   ++     
Sbjct: 610 PNDVAKQYGAEILRLWVASVDT-DNDVRVSMEILGQV--SESYRKIRNTLRFLLANTSDF 666

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDA 430
                         D+ ++   ++++  I +  +N         V +   V     Y D 
Sbjct: 667 KKEQAVAYEDLRSVDQYMMVKFNQLVATITKAYENYRFMDVYKAVNNFLTVDLSAFYLDF 726

Query: 431 QKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            K     +   + A   +      ++ ++  LL   +P  + +I+  L   DE   F  L
Sbjct: 727 AKDVVYIEAADNLARRQMQTVFYDILVKITKLLTPILPHTSEEIWSYL--EDEAEEFVQL 784

Query: 490 DQ 491
            +
Sbjct: 785 AE 786



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 50  KKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMMGYRAPYNPGWDTHGLPIEQVL 109

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV              K +        R+    L +S D      T    +      
Sbjct: 110 AKKGVKRKEIPRADYLEMCKEYALSQVDKQREDFKRLGVSADWENPYVTLTHDYEAAQIR 169

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           ++  ++DKG IY+G    ++S   E+   + E+    
Sbjct: 170 VFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHN 206


>gi|291236700|ref|XP_002738276.1| PREDICTED: Isoleucyl tRNA Synthetase family member (irs-1)-like
           [Saccoglossus kowalevskii]
          Length = 1490

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 101/276 (36%), Gaps = 11/276 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 710 VFDCWFESGSMPYAQQHYPFEHRREFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFNKP 769

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DPIEV+ + G DALR +L+       +   + +
Sbjct: 770 PFKNLIVNGLVLASDGQKMSKRKKNYPDPIEVVNKYGSDALRLYLINSPVVRAESLRFKE 829

Query: 344 DGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSVCSR 396
           +G++  +             + ++V  + KD +                 D+ I+S    
Sbjct: 830 EGVRDVLKDVFLPWYNAYRFLMQNVERLHKDENVQFVYNEDLLRPLDNIMDKWIMSFTQS 889

Query: 397 VLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  +R+ M    ++  + +++  V    + Y  + +         +     L     V+
Sbjct: 890 LIAFVRQEMAGYRLYTVVPKLVRFVEKLTNWYVRSNRKRLKGDGGSEDCLCALQTLFSVL 949

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +  ++  F P L  +I+  L    ++   ++ D+
Sbjct: 950 FSMVRMMTPFTPFLTEQIYQNLRHLIDSSTSKNQDE 985



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + +        +    PH GH     I D++ R+   +G  V    G D HG  +   
Sbjct: 36  KGKPRYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHGNGFYVERRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + S+ +R +   L   I +D+  +T     
Sbjct: 96  IDKTLGITGPDDVMKMGIEKYNAECRKIVMRYSKEWRFVVTRLGRWIDFDNDYKTLYPSF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            +T   ++K++ DKG +Y+G     YS       ++ E
Sbjct: 156 METIWWVFKQLFDKGLVYRGFKVMPYSTACNTPLSNFE 193


>gi|291383438|ref|XP_002708221.1| PREDICTED: isoleucine tRNA synthetase [Oryctolagus cuniculus]
          Length = 1327

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/456 (14%), Positives = 137/456 (30%), Gaps = 35/456 (7%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
           T   GQ +  A +N   T K +      +           +    R+     +      +
Sbjct: 428 THFAGQYVKDADKNIIRTLKEWDRLLMAS--TFTHSYPFCW----RSDTPLIYKAVPSWF 481

Query: 111 KKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
            ++    D        CY     +R++ + N  +  +            P+     + + 
Sbjct: 482 VRVEHMVDQLLRNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFE 541

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
             +       L          L  E  + +      G   L                   
Sbjct: 542 EVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSHCGKGRLHRI--------------SE 587

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   A  L    
Sbjct: 588 VFDCWFESGSMPYAQVHYPFETKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGQP 647

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP+ +I + G DALR +L+       ++  + +
Sbjct: 648 PFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIHKYGADALRLYLINSPVVRAENLRFKE 707

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           +G++  +   L    N     +   + +  ++    +       ES    D  ILS    
Sbjct: 708 EGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEKEFLYNESTIKESPNITDRWILSFMQS 767

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++      M    ++  + +++  V    + Y    +     +   +     L     V+
Sbjct: 768 LVGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVL 827

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             L  L+  + P L   ++  L +  +    Q  D 
Sbjct: 828 FSLCRLMAPYTPFLTELMYQNLKMLIDPVSVQDKDT 863



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K R K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 101 KHRPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 160

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 161 IDKTLGIKGPEDVAKMGIAEYNNQCRAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQF 220

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 221 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 264


>gi|149370164|ref|ZP_01890015.1| putative valyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356655|gb|EDM45211.1| putative valyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 877

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
            +  DP   +  W  +    ++      +  +     ++P +  V G DIL F    +  
Sbjct: 450 DLNQDPDA-LDTWFSSWLWPMSVFDGLNNPDNEEFNYYYPTNDLVTGPDILFFWVARMVI 508

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
             +  +   P      +      +  K+SKSLGN  D +++I++   D +R  L+     
Sbjct: 509 AGYEYTDQRPFKNVYLTGLVRDKQRRKMSKSLGNSPDALKLIDDYSADGVRVGLLLSAPA 568

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+   ++      +N + N    + S    + D  IP P A   + E   S   
Sbjct: 569 GNDLMFDEALCQQ--GKGFSNKVWNAFRLTQSW---EQDASIPQPEASALAIEWYRSKLQ 623

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE-- 453
           + L EI ++     I  AL     L+       D    W L+   P   + +   T    
Sbjct: 624 QTLVEIEDHYSKYRISDALMGTYKLIW------DDFCGWLLEIVKPAYQAPIDTKTYNEI 677

Query: 454 --VIRQLAILLQAFVPKLANKIFDIL 477
             +      +L  F+P L  +++ ++
Sbjct: 678 IALFEDNLRILHPFMPFLTEELWHLI 703



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 48/161 (29%), Gaps = 18/161 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + +RE   I           H+GH     I DVL R  RL G +  +  GTD        
Sbjct: 30  VDDREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGFNACWVPGTDHASIATEA 89

Query: 61  A----------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRH 102
                             +        + ++      D    L  S D      T +   
Sbjct: 90  KVVARLKEQGIDKADLTREEFLKHAWDWTEEYGGVILDQLKKLGASCDWERTKFTLDPNM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  +  + +KG IY+G     +    +   +D+EV  
Sbjct: 150 SQQVIKSFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVNH 190


>gi|207625|gb|AAA42320.1| transfer RNA-Val synthetase [Rattus norvegicus]
          Length = 594

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +++   N   W      ++        +  +  + P    P  R            
Sbjct: 208 HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 267

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 268 EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 325

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 326 HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 385

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L    + G+D   D + 
Sbjct: 386 QGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 445

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   E
Sbjct: 446 ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSKPEGHESLVDRWIRSRLAEAVRLSNE 503

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 504 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAADCARQTLYTCLDVAVRL 562

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 563 LSPFMPFVTEELFQRL 578


>gi|50288137|ref|XP_446497.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525805|emb|CAG59424.1| unnamed protein product [Candida glabrata]
          Length = 1105

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/380 (13%), Positives = 128/380 (33%), Gaps = 48/380 (12%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +      +       Y    E               +   +  + ++  F          
Sbjct: 566 WCISRQLWWGHRCPVYFIDIEGQENDRNDGNYWVAGRDLAEAETKAKAKFPDAKFTLHQD 625

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
           + ++  W  +     +T G+ D        F+P  +   G DIL F    +      L+ 
Sbjct: 626 EDVLDTWFSSGLWPFSTLGWPDKTK-DMEDFYPFSMLETGWDILFFWVTRMILLGIKLTG 684

Query: 283 NLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-- 339
           ++P   +VF H  +   +G K+SKSLGNV+DP++VI  + ++ L   L+      ++   
Sbjct: 685 SVPF-NEVFCHSLVRDAQGRKMSKSLGNVVDPLDVITGIKLEDLHAKLLMGNLDPREVEK 743

Query: 340 ---------------------------------FYDKDGLKKRVNADLANGIGNLVSRSV 366
                                              + D L+        N I      ++
Sbjct: 744 AKLGQKESYPNGIPQCGTDAMRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFAL 803

Query: 367 SMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
             +  DY         G  +  ++ IL   ++  Q + + ++ +    + + +       
Sbjct: 804 MRLGDDYVPPAKEGLSGNESLVEKWILHKLTKTSQTVNDALEKRDFLTSTSAIYEFWYLI 863

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K    + ++ ++  +       ++     L+  F+P ++ +++  +      
Sbjct: 864 CDVYIENSKHLIQEGSDLEK-KSARDTLYILLDNALKLIHPFMPFISEEMWQRIP----K 918

Query: 484 RCFQSLDQRLKPGFMLHKTF 503
           R  ++++  ++  + +++  
Sbjct: 919 RSTETVNTIVRASYPVYQKV 938



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 19/134 (14%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             I           HIGHA  + I D L R++R+ G  VLF  G D  G       +   
Sbjct: 184 FCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQL 243

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 + ++  +  ++    L  SYD      T + +   +  
Sbjct: 244 WAKEKKTRHDFGRTKFVEKVWEWKEEYHQRIKNQIKFLGASYDWNREAFTLDPQLSKSVV 303

Query: 108 ILWKKISDKGDIYK 121
             + ++ D G IY+
Sbjct: 304 EAFVRLHDDGTIYR 317


>gi|16800837|ref|NP_471105.1| leucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|29336554|sp|Q92AZ9|SYL_LISIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16414256|emb|CAC97000.1| leucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 803

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLELVDWPENIKDMQRNWIGRSE 226



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 136/414 (32%), Gaps = 61/414 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 341 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 401 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 461 GESPLANLHDWVNVTDENGRKGRRETNTMPQWAGSSWYFLRYIDPKNSEAIADKEKLAEW 520

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 521 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 581 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 631

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 632 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 688

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                             T+    VE       LL    P LA ++++IL   +
Sbjct: 689 ----------------RDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTE 723


>gi|163791562|ref|ZP_02185965.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873167|gb|EDP67268.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 805

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 7/181 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           E+E  Y      YP+ Q  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 29  EKENFYALDMFPYPSGQGLHVGHPEGYTATDIVSRLKRAQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F   N   FR   + L  SYD    + TT+  ++   + ++ K+ +KG  
Sbjct: 89  ALDTGNDPAEFTAHNIETFRRQINSLGFSYDWEREVNTTDPDYYKWTQWIFTKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +         ++EV  G          +PV       +  +++AY D+LL  
Sbjct: 149 YEAEVAVNWCPALGTVLANEEVIDGKS----ERGGHPVFRKPMRQWMLKITAYADRLLDD 204

Query: 180 Y 180
            
Sbjct: 205 L 205



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 103/268 (38%), Gaps = 41/268 (15%)

Query: 250 GSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKG 300
             K K W P D+++ G +    H +Y   +         +    P  K       +    
Sbjct: 515 PEKLKQWLPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGNN 574

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS GNV++P +V+E+ G D LR + +          ++++GL+             
Sbjct: 575 EKMSKSKGNVVNPDDVVEKFGADTLRMYEMFMGPLDASIAWNENGLEGS---------RK 625

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R   +I+ +   +      F   D  +  V  + ++++ E+ +    + A++Q++  
Sbjct: 626 FLDRVWRLIMDEEGKVRDRITTFN--DGYLDVVYHQTVKKVTEDFEQLRFNTAISQMMVF 683

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E  +                       + V+ I+    LL    P +  +++  L  +
Sbjct: 684 VNEAYK--------------------ADALPVDYIKSFVQLLAPIAPHMGEELWAHLTNS 723

Query: 481 DENRCFQSLDQRLKPGFMLHKTFDPIFP 508
           +E+  + +        F++    + +F 
Sbjct: 724 NESISYVAWPT-FDEKFLVEDEIEVVFQ 750


>gi|296435818|gb|ADH17992.1| valyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437678|gb|ADH19839.1| valyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140177|gb|ADH96935.1| valyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 939

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVIRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYHLFEEYKN--FINKLWNGARFIFGHISELTSRDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K + D+       +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQDSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|77920049|ref|YP_357864.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|84029525|sp|Q3A1R3|SYI_PELCD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77546132|gb|ABA89694.1| Isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 927

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 117/352 (33%), Gaps = 27/352 (7%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                   +  +N V+   +     + S      + Y     E +   +  + V    + 
Sbjct: 437 NWVPRWGRDRIYNMVENRPDWCISRQRSWGVPITIFYCAKCGEALEDSKVMDYVADLFEE 496

Query: 203 GLKDLSLSRKT----------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
           G  DL   +               G         I+ VW D+  ++              
Sbjct: 497 GGSDLWFDKPAKELMPAGTTCPGCGHDEFTKETDILDVWFDSGVSHAAVLD------NRD 550

Query: 253 AKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
              WPADL++ G D     FH+    +       P    +     +  KG+K+SKS+GNV
Sbjct: 551 YLSWPADLYLEGSDQHRGWFHSSLLASVGTRELTPYKSVLTHGFVVDGKGKKMSKSVGNV 610

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           + P EVI++ G + LR ++  +     D     + L++   +D    I N   R +   L
Sbjct: 611 VAPEEVIKKYGAEILRLWVAAQDY-RDDIRISNEILQRL--SDAYRRIRNTA-RYILGNL 666

Query: 371 KDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
             +D    +       E D   L+    +   + +  ++   H     V +  S      
Sbjct: 667 SGFDPSRDMVADDQLLELDRWALAKLEDLAGRVEKAYEDYEFHIIYHAVHNFCSVEMSSF 726

Query: 427 YFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y D  K    +  T+     +       ++  +  L+   +   A +I+  +
Sbjct: 727 YLDVLKDRLYVSGTDSIARRSAQTAMYRILDCITRLIAPVLSFTAEEIWAFM 778



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   HIGHA   I+ D++ +  R+ G    +  G D HG  I   
Sbjct: 45  RTRPNFTLHDGPPYANGHIHIGHALNKILKDIVLKSRRMKGFYAPYVPGWDCHGLPIELM 104

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                   K             V+ DQ  +   +  + L +   +D    T    +    
Sbjct: 105 VDKKLGKKKRDMTKVEIRKECRVYADQWVKIQSEEFERLGVMGEWDRPYLTMTHHYEAVT 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +  +KG ++KG     +         + EV  
Sbjct: 165 ARELARFVEKGGLFKGKKPIHWCSSCVTALAEAEVEY 201


>gi|19112361|ref|NP_595569.1| cytoplasmic isoleucine-tRNA ligase Irs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3122901|sp|O13651|SYIC_SCHPO RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2257546|dbj|BAA21439.1| ISOLEUCYL-TRNA SYNTHETASE ,CYTOPLASMIC [Schizosaccharomyces pombe]
 gi|2950493|emb|CAA17821.1| cytoplasmic isoleucine-tRNA ligase Irs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 1064

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 100/262 (38%), Gaps = 12/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y           +PAD    G D     F+ +     LL    
Sbjct: 520 VFDCWFESGSMPYASRHYPFERIEEFKHGFPADFISEGVDQTRGWFYTLTVLGTLLFDKA 579

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-YDK 343
           P    + S   +   G+K+SK L N  +P  +IE+ G DALR +L+       +   + +
Sbjct: 580 PYKNVIVSGLVMAEDGKKMSKRLKNYPEPNLIIEKYGSDALRLYLINSPVVRAEILKFKE 639

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMIL------KDYDGMIPTPGAFTESDESILSVCSRV 397
           DG+++ V   L     +         L      KD+        +    D  IL+ C  +
Sbjct: 640 DGVREVVTRVLIPWWNSYKFFEAQAALYKKVTGKDFVFDDAATLSSNVMDRWILARCQSL 699

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVI 455
           +  + E M+   ++  + Q++ L+ E  + Y        LK  + +      L V  EV+
Sbjct: 700 IGFVDEEMKQYRLYTVVPQLLGLIEEMTNWYI-RFNRRRLKGEDGEIETINALNVLFEVL 758

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L  ++  F P +   I+  L
Sbjct: 759 FTLVRIMGPFTPFITENIYQHL 780



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R          +   +PH GH     I D + R+  L G  V    G D HG  +   
Sbjct: 30  QGRPTYTFFDGPPFATGRPHHGHLLASTIKDSVTRYACLKGYHVERRFGWDTHGLPVEHE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V   +  +R   + L   I +D+  +T     
Sbjct: 90  IDKKLGITGSDDVMAMGIDKYNAECRKIVMTYASEWRATVERLGRWIDFDNDYKTLYPSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++  KG +Y+G     YS       ++ E  +   
Sbjct: 150 MESVWWVFKELHTKGKVYRGYRVMPYSTACTTPLSNFEAQQNYK 193


>gi|123440980|ref|YP_001004969.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166229780|sp|A1JJE1|SYI_YERE8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122087941|emb|CAL10729.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 938

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 118/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  E +    + L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSTELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----ARPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI E  +N   H  + +++   S      Y
Sbjct: 668 GFDPALHQVKPEEMVVVDRWAVGRAQAAQAEIMEAYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ +
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNEM 778



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKAKGMSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D   ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNAHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|328957135|ref|YP_004374521.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673459|gb|AEB29505.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 929

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 103/272 (37%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 516 FTKETDIMDVWFDSGSSHEAVLR------ARENLTFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +   G K+SKSLGN I P +VI+++G D +R ++   +    D
Sbjct: 570 AINGVAPYKTVLSQGMVLDGDGRKMSKSLGNTIAPSKVIKQMGADIVRLWV-SSVDTQAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                + LK+       + +   +  ++  +L +     P+            D+ ++  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLANTTDYDPSANKVDFHDLRSVDKYLMIR 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYV 450
            ++++++   +            + +   V     Y D  K     +         +  V
Sbjct: 683 LNQLVEKAEGHYDRYEFSSIYQLINNFCTVDLSQFYLDFAKDVVYIEAEDAYERRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             EV+ ++  LL   +P  A +I+  L   DE
Sbjct: 743 FYEVLVKITKLLTPILPHTAEEIWSFLSETDE 774



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D++ R+  + G    +  G D HG  I +A
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGHALNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K             +  +     ++    L +   +D    T  K + +   
Sbjct: 105 LTNKGVKRKEMSLAEFRKLCEEYAWEQVNKQKEDFKRLGVAGEWDHPYVTLTKEYEEAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESALAEAEIEY 200


>gi|238855309|ref|ZP_04645627.1| leucine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664289|ref|ZP_05865142.1| leucyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282931921|ref|ZP_06337390.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472480|ref|ZP_07812972.1| leucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832079|gb|EEQ24398.1| leucine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529914|gb|EEQ68915.1| leucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260562175|gb|EEX28144.1| leucyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303951|gb|EFA96084.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 11/234 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +  D+N  NF+   ++L  SY  D  +RT++   +   + +++++   G  
Sbjct: 88  ALKTGQDPAIVTDENIANFKKQLNMLGFSYDWDREVRTSDPNFYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                ++  P++           G      +  S K+F+     PD    + Y 
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEGAQVRFKIKDSDKSFEVYTTRPDTLYGVCYT 256



 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 82/464 (17%), Positives = 155/464 (33%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  ++    + + +  D+  + F+             +   +
Sbjct: 329 YGTGAVMAVPAHDQRDYEFAKKHDLPMKRVIEGGDLDKEAFV----DDGVHVNSDILDGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           +      K           EA  N          Q Y  +  PV   E+           
Sbjct: 385 NIADAKKKIIAYLEEHNFGEAKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                        +LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------ELPLVLPHATDIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      +N          K+ P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYIDPHNNEKLGDYELFKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  K +++ G IL   +K+SKS GNV++P EVIEE G D+LR + +          +
Sbjct: 554 TKEPFQK-LYNQGLILKDHDKMSKSKGNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   I +     E+D S+  V ++ +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLDPIVSDKVVKENDGSLDKVYNQTVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+ +N   + A++Q++  V+E                   +A T+     E       
Sbjct: 664 VTEDFENLHFNTAISQMMVFVNEA-----------------QKAKTIPM---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +L   DE+  +     +  P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVLG-HDESISYAEWP-KFDPAKLVESTVE 745


>gi|170761712|ref|YP_001785514.1| leucyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408701|gb|ACA57112.1| leucine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 813

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + ++ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWVFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSDVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKTMQKHWI 222



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 95/275 (34%), Gaps = 29/275 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNKNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGSDVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKNNKSNMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ I E++     + ++A+++   + + +Y           ++  + ++      E I  
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYL---------GSDTIKNAS---FLKESIID 709

Query: 458 LAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
              LL  F P  A + ++++ +     N  +  LD
Sbjct: 710 FITLLAPFAPHFAEEQWELIGINSSIFNEKWPELD 744


>gi|313127462|ref|YP_004037732.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293827|gb|ADQ68287.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 962

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 126/377 (33%), Gaps = 55/377 (14%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
                 V   E++ +F R +    K  ++        +P   R E        L +    
Sbjct: 446 CRCGADVVVAEQDTWFLRYNDEAWKQKAHDVVSRMDAIPENTRGE-YDHTIDWLNEWPCI 504

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP---------------------- 248
           R  +  G ++P D  +++    D+       T                            
Sbjct: 505 R-NYGLGTRLPWDDDFVIEPLSDSTIYMAYYTIAHRLQDVPVEELDRDFFDALFYGADAV 563

Query: 249 ----------DGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFI 296
                           ++P        D++  H  +  +    L      P+ +   G  
Sbjct: 564 EDPDEKALELRKEWNYWYPVTYRFSANDLISNHLTFYLFHHAELFDQSNWPEGIVIMGMG 623

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
           L +GEK+S S G+V+ P + IEE G D +R+FL+      +D  +  + ++   N     
Sbjct: 624 LLEGEKMSSSKGHVVLPGKAIEEYGADTVRFFLLNSAEPWQDYDWRAEQVESVRN----- 678

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            +    +R+  +I  D     P      + D  +LS     + ++ E M+      A   
Sbjct: 679 QLERFWNRADEVINSDVPEAQP---ELEQEDRWLLSKLQHTVSDVTEAMEQSETRSASQA 735

Query: 417 VISLVSEVDRY-FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                     Y F+    W  ++T+ DR +   +    V+     LL  F+P + N++ +
Sbjct: 736 AF--------YNFEEDLRWYRRRTDLDRPAA-RWTLQHVLETRLRLLAPFIPFMTNELHE 786

Query: 476 IL-FVADENRCFQSLDQ 491
            L     E+  +   D+
Sbjct: 787 RLTGTPAEDAPWPEPDE 803



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 27/166 (16%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +I+    YP+   HIGHA    + DV AR+ R  G +VLF       G  I  A +    
Sbjct: 42  FITVPYPYPSGGMHIGHARTYTVPDVYARYRRQQGDNVLFPIAWHVTGTPIIGAVERLKK 101

Query: 68  ------------------------TTKVFVDQ-NSRNFRDMADVLDISYD--DFIRTTEK 100
                                   T   F       +++     L +S D      T ++
Sbjct: 102 GEEKQLSVLRDTYNVSEDTLTDLETPMGFARHFIEEHYKKGMQSLGLSIDWRREFTTNDE 161

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           R+       ++ + D+G + KG +   Y   +E      ++ +G +
Sbjct: 162 RYSKFITWQYETLKDRGLLEKGLHPVKYCTDEEQPVTTHDLLEGEE 207


>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 913

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 124/332 (37%), Gaps = 33/332 (9%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 440 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFREHGSNVWFEREAKDLLPEGFT 499

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 500 HTGSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 553

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 554 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 612

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
             +    D     D LK+         +   +  +   +L + D   P+          E
Sbjct: 613 SSVDYQSDVRISDDILKQ------VAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELRE 666

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPD 442
            D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N  
Sbjct: 667 VDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHA 726

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
               +  V  +V+  L  L+   +P  A++++
Sbjct: 727 DRRAIQTVLYDVLVALTKLVTPILPHTADEVW 758



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 37  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIEQA 96

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 97  LTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 157 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 206


>gi|57157193|dbj|BAD83626.1| isoleucyl tRNA synthetase [Entamoeba histolytica]
          Length = 677

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/417 (15%), Positives = 140/417 (33%), Gaps = 67/417 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +      P+ +     +F  + +++DKL+    S   + +P   R           
Sbjct: 15  HSYPFCWRSDTPLIYRAIPSWFVNVESFKDKLVES--SQQTYWVPENIREGRFENWLRNA 72

Query: 205 KDLSLSRKTFDWG--IKIPDDPQY------------------------------------ 226
           +D ++SR  F WG  I I  D  Y                                    
Sbjct: 73  RDWAISRNRF-WGTPIPIWTDDDYTEFVCVGSVKELEELTGQKVTDLHREFVDNLVIEKN 131

Query: 227 ---------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    +   W ++ +     + Y         + +P D    G D     F+++  
Sbjct: 132 GKKLHRISEVFDCWFESGSMPYGQSHYPFENVEQFKENFPGDFIAGGIDQTRGWFYSLIV 191

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L    P    V +   +   G+K+SK L N  DP+++I   G DALR  L+   A 
Sbjct: 192 ISTALFGKAPFKNCVVNGLVLASDGKKMSKRLKNYPDPMDMINLYGADALRLSLINSPAV 251

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDESI 390
             +        +++   +L + I      ++  + + +   +            + D  I
Sbjct: 252 RAETV----KFQEKTLKELISTIFLPWFNTLRYLKQSFKPEMKIMAIDKIANMNDMDRWI 307

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +++++RE M+   ++  +  ++  LV+  + Y    +             T   
Sbjct: 308 LSSLMSLVKKVREEMKMFRLYTIITPLVDLLVTLSNWYIRLNRKRFRGGYGEAAQETSCS 367

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    ++ ++IL+  F P  +   +  L     N      +++++      +  +P+
Sbjct: 368 VLYHCLKIMSILMAPFTPFFSEFCYQKLKAFPLNY-----EEKMEESVHFVQIPEPL 419


>gi|27464485|gb|AAO16101.1| methionyl-tRNA synthetase MetG [Haemophilus influenzae biotype
           aegyptius]
          Length = 213

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 11/181 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +  K+ ++ A+ Y N   H+GH  E I AD+  RF R+ G  + F    D HG  I   
Sbjct: 3   TQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLN 62

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
           A   G+T +  + +   +        +IS+D++  T  + +      ++ K+   G I  
Sbjct: 63  ADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKS 122

Query: 122 GCYSGWYSLRDEAYYNDD-----------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
              S  +      +  D            E   G + +   + ++P+  +         +
Sbjct: 123 KVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTT 182

Query: 171 A 171
            
Sbjct: 183 P 183


>gi|269302974|gb|ACZ33074.1| valyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 940

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 81/416 (19%), Positives = 131/416 (31%), Gaps = 80/416 (19%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  +S ++  L  + ES    I P +     +S+V   L+D  +SR+   W
Sbjct: 355 IEPYLSKQWFVSVSEFRGALREFVESQDIKIFPKDFVKNYLSWVNH-LRDWCISRQ-LWW 412

Query: 217 GIKIP------------------------DDPQ------YIMYVWIDALTNYLTTTGYLD 246
           G +IP                         DP        ++  W  +    LT  G+ D
Sbjct: 413 GHRIPVWYHKNDDERVLCYDGEGIPEEVAQDPDSWYQDPDVLDTWFSSGLWPLTCLGWPD 472

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSH----------- 293
                  KF+P  L V G DIL F           +S   P   +VF H           
Sbjct: 473 ENSPDLKKFYPTALLVTGHDILFFWVTRMVLLCSSMSGEKPF-SEVFLHGLIFGKSYKRY 531

Query: 294 ------------------------GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                     ++ K EK+SKS GNVIDP+E+I   G DA+R  L
Sbjct: 532 NDFGEWSYISGKEKLAYDMGEALPDGVVAKWEKLSKSKGNVIDPLEMIATYGTDAVRLTL 591

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTES 386
                 G+    D    ++      AN + N        I               +    
Sbjct: 592 CSCANRGEQIDLDYRLFEE--YKHFANKVWNGARFIFGHISDLQGKDLLAGIDEDSLGLE 649

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA 444
           D  IL   + ++ ++ E        +                Y +  KP    K   + +
Sbjct: 650 DFYILDGFNELIHQLEEAYATYAFDKVATLAYEFFRNDLCSTYIEIIKPTLFGKQGNEAS 709

Query: 445 STVLYVTVEVIRQ-LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFML 499
            +     + V+   +  +L    P +   +F  L + D        D     G  L
Sbjct: 710 QSTKRTLLAVLLINVLGVLHPVAPFITESLF--LRIQDTLGALPEGDGDAFTGHAL 763



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 20/176 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    +           H+GHA    + DVL R+ R+ G +V +  GTD  G      
Sbjct: 35  SDKPPYSVIMPPPNVTGVLHMGHALVNTLQDVLVRYKRMSGFEVCWIPGTDHAGIATQTV 94

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
            +                         + +++ +        L  S  +D    T E   
Sbjct: 95  VERHLQASEGKRRTDYSREDFLKHIWAWKEKSEKVILSQLRQLGCSCDWDRKRFTMEPLA 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV 157
           +   +  +K + + G IY+G Y   +    +    DDEV Y+  DG  Y  ++  V
Sbjct: 155 NRAVKKAFKTLFENGYIYRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRMV 210


>gi|116492415|ref|YP_804150.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266121|sp|Q03GG4|SYL_PEDPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116102565|gb|ABJ67708.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 805

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 9/200 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+ Q  H+GH       D+++R  R+ G  VL   G D  G    + 
Sbjct: 29  DKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N +NF+     L  SYD    + TT+  ++   + +++++  KG  
Sbjct: 89  AMKTGNNPRDFTAKNIQNFKRQIQSLGFSYDWSREVNTTDPAYYKWTQWIFEQLYKKGLA 148

Query: 120 YKGCYSGWYSL--RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      ++          ++EV  G   +       PV     + +  +++AY D+L+
Sbjct: 149 YEKETLVNWAPDLMGGTVVANEEVVDGKTERGGF----PVYRKPMKQWILKITAYADRLI 204

Query: 178 SYYESHPEFILPIERRNEVI 197
              +         E +   I
Sbjct: 205 DDLDLVDWPDSIKEMQKNWI 224



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 40/255 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P DL+V G +    H +Y   +         +   
Sbjct: 499 WYFLRYVDPKNDQKIADEDLLKEWLPVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTK 558

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P +++E  G D LR + +      +   + +
Sbjct: 559 EPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSE 618

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           DGL         NG    + R   +++ D + +       TE+D S+  + ++ ++++ +
Sbjct: 619 DGL---------NGSRKWIDRVWRLMIDDENQLR--DHIVTENDGSLDMIYNQTVKKVTD 667

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   + A++Q++  V+E  +               D+   V       +  L  +L 
Sbjct: 668 DYENMRFNTAISQMMVFVNEAYK--------------ADKLPAVY------MEGLVKMLA 707

Query: 464 AFVPKLANKIFDILF 478
             +P +A +++ +L 
Sbjct: 708 PIIPHVAEELWSLLG 722


>gi|76650927|ref|XP_581858.2| PREDICTED: valyl-tRNA synthetase-like [Bos taurus]
          Length = 1252

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 112/376 (29%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R            
Sbjct: 693  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRTEAEAR 752

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 753  EKAAKEFCVSPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 810

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 811  HDILFFWVARMVMLGLKLTGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVTL 870

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 871  QGLHDQLLNSNLDPSEVEKAKEGQKADFPTGIPECGTDALRFGLCAYTSQGRDINLDVNR 930

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +     +   G  +  D  I S  +  ++   +
Sbjct: 931  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSEPGGRESLVDRWIRSRLTEAVRLSNQ 988

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 989  GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1047

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1048 LSPFMPFVTEELFQRL 1063



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 325 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 384

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
              +                  + ++           L  S D + R   T + +     
Sbjct: 385 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 443

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 444 TEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 478


>gi|297206419|ref|ZP_06923814.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149545|gb|EFH29843.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 804

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 93/233 (39%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V  D+N  NF+   ++L  SY  D  ++T++  ++   + +++++   G  
Sbjct: 88  ALKTGQDPAVVTDENIANFKKQLNMLGFSYDWDREVKTSDPNYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +    PE +  ++R     S        +  S K F+     PD    + Y 
Sbjct: 204 LDELDWPEPVKEMQRNWIGRSEGAQVRFKIKDSDKNFEVYTTRPDTLYGVCYT 256



 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 78/464 (16%), Positives = 157/464 (33%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  ++    + + +  D+  + F+             +   +
Sbjct: 329 YGTGAVMAVPAHDQRDYEFAKKHDLPIKRVIEGGDLDKEAFV----DDGVHVNSDILNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + +    K           EA  N          Q Y  +  PV   E+           
Sbjct: 385 NIEDAKKKIIAYLEEHNLGEAKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                        +LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------ELPLVLPHATDIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      +N          K+ P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNNEKLGDYELFKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   +K+SKS GNV++P EVIEE G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKDHDKMSKSKGNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   I +     E+D S+  + ++ +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLDPIVSDKVVEENDGSLDKIYNQTVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+ ++   + A++Q++  V+E                   +A T+     E       
Sbjct: 664 VTEDFESLHFNTAISQMMVFVNEA-----------------QKAKTIPM---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +L   +E+  +     +  P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVLG-HNESISYAEWP-KFDPEKLVESTVE 745


>gi|145632348|ref|ZP_01788083.1| beta-hexosaminidase [Haemophilus influenzae 3655]
 gi|144987255|gb|EDJ93785.1| beta-hexosaminidase [Haemophilus influenzae 3655]
          Length = 941

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEDMIILDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ-WMEEEGY 165
                K+ + G +YKG     + L   +   + EV              P +  +E E  
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESAVEIEAK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|322384104|ref|ZP_08057822.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151184|gb|EFX44493.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 896

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 107/291 (36%), Gaps = 26/291 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G +     + IM VW D+ +++    G            WPADL++ G D     F
Sbjct: 484 CPNCGHEEFTKEKDIMDVWFDSGSSHAAVLG------QRNELSWPADLYLEGSDQYRGWF 537

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++       +    P    +     +  +G K+SKS+GN IDP +V E++G D LR ++ 
Sbjct: 538 NSSLITGVAVKEEAPYKGVLSHGFTLDGEGRKMSKSIGNTIDPNQVCEKLGADILRLWVA 597

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
                 +D       L      +    +   +  ++  +L +     P           E
Sbjct: 598 SVDYQ-QDHRVSDKIL------NQITEVYRKIRNTLRFLLGNLSYFNPVTDKVPVEQMEE 650

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNP 441
            D       +R+++++         H     +     V     Y D  K         +P
Sbjct: 651 LDRYAYIRLNRMIEKVVRAYDAYEFHLVYQTIHHFCAVEMSSFYLDIIKDRLYANSPDDP 710

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF-VADENRCFQSLDQ 491
            R ++   V  E +  +  L+   +P  A++++  +  V++E+     L +
Sbjct: 711 ARKAS-QTVMYETLLAITKLIAPILPHTADEVWSYIPEVSEESVQLAILPE 760



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N   HIGHA   ++ D + RF  + G D  +  G D HG  I +A
Sbjct: 19  EGKPKFILHDGPPYANGDIHIGHALNKLLKDFIIRFKTMQGYDAPYVPGWDTHGLPIEQA 78

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
             N+                 K +  +     ++    L +  D      T +  +    
Sbjct: 79  IANSGKVDRKQMSVPEFREYCKEYAMKWVEKQKEQFIRLGVRGDWEHPYITLQPEYEAEQ 138

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             L+ K+  KG IYKG    ++S   E+   + E+   
Sbjct: 139 IRLFGKMVRKGYIYKGLKPVYWSPSSESALAEAEIEYR 176


>gi|270339726|ref|ZP_06005817.2| isoleucine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333958|gb|EFA44744.1| isoleucine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 1235

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/411 (14%), Positives = 129/411 (31%), Gaps = 56/411 (13%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL----------- 169
           K       S     + N  E     +         P+    +E +  +            
Sbjct: 564 KTIRWQPESTGTGRFGNWLENLNDWNLSRSRFWGTPLPVWRDENHNEKCIGSVEELYNEI 623

Query: 170 -SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
             +    ++       +  +P +   E    +      +       D G  +  +   ++
Sbjct: 624 EKSVAAGVMKNNPLKDKGFVPGDYSQENYDRIDLHRPYIDYVVLVNDEGKPMYRESD-LI 682

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAK----------------------------FWPADL 260
            VW D+         Y      +                               F+PAD 
Sbjct: 683 DVWFDSGAMPYAQLHYPFEGAINAEGLKKTGMSEAEYRASLVNSTYEGTPVAPAFFPADF 742

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G D     F  ++  A ++  ++     + S   +  KG K+SK +GNV +P E+IE
Sbjct: 743 INEGVDQTRGWFFTLHAIATMVFDSVSFKNVISSGLVLDAKGNKMSKHVGNVTNPFEMIE 802

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D +R++++       +  +D +G+ +                ++   + +YD    
Sbjct: 803 KYGADPVRFYMMTNSEPWDNLKFDPNGIDEVRRKFFGTLYNTYSFFALYANVDNYDPEQY 862

Query: 379 TP-------GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY-- 427
                        E D  ILS  + +++ +   +++    RA   + S V     + Y  
Sbjct: 863 LKMLQGDSREDLKEIDRWILSCLNTLVKNVTHELEDYDPTRAGRLIDSFVNNDLSNWYVR 922

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + ++ W   K   +            +  ++ LL  F P  A++++  L 
Sbjct: 923 LNRKRFW--GKEMSEDKIAAYNTLYTCLMTVSKLLAPFAPFYADELYHDLG 971



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 24/166 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +          N  P I H     I D   R+  + G  V    G D HG  +  + + 
Sbjct: 60  PQFIFFEGPPSANGHPGIHHVLARAIKDAFNRYKTMQGFKVERKAGWDTHGLPVELSVEK 119

Query: 65  AGVTTK----------------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
               TK                        V + +  +R++ + +   +  D    T + 
Sbjct: 120 ELGITKKDIDNKASDKYISVEEYNHRCRENVMKFTAEWRNLTEKMGYFVDLDHPYITFDN 179

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +T   L K++ +KG +YKG     YS       +  E+ +   
Sbjct: 180 KYIETLWWLLKQLYNKGMLYKGYTIQPYSPAAGTGLSSHELNQPGC 225


>gi|256851598|ref|ZP_05556987.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661023|ref|ZP_05861938.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282932387|ref|ZP_06337818.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256616660|gb|EEU21848.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548745|gb|EEX24720.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303501|gb|EFA95672.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 93/233 (39%), Gaps = 9/233 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V  D+N  NF+   ++L  SY  D  ++T++  ++   + +++++   G  
Sbjct: 88  ALKTGQDPAVVTDENIANFKKQLNMLGFSYDWDREVKTSDPNYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +    PE +  ++R     S        +  S K F+     PD    + Y 
Sbjct: 204 LDELDWPEPVKEMQRNWIGRSEGAQVRFKIKDSDKNFEVYTTRPDTLYGVCYT 256



 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 78/464 (16%), Positives = 157/464 (33%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  ++    + + +  D+  + F+             +   +
Sbjct: 329 YGTGAVMAVPAHDQRDYEFAKKHDLPIKRVIEGGDLDKEAFV----DDGVHVNSDILNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + +    K           EA  N          Q Y  +  PV   E+           
Sbjct: 385 NIEDAKKKIIAYLEEHNLGEAKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                        +LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------ELPLVLPHATDIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      +N          K+ P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNNEKLGDYELFKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   +K+SKS GNV++P EVIEE G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKDHDKMSKSKGNVVNPDEVIEEYGADSLRTYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   I +     E+D S+  + ++ +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLDPIVSDKVVEENDGSLDKIYNQTVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+ ++   + A++Q++  V+E                   +A T+     E       
Sbjct: 664 VTEDFESLHFNTAISQMMVFVNEA-----------------QKAKTIPM---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +L   +E+  +     +  P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVLG-HNESISYAEWP-KFDPEKLVESTVE 745


>gi|258544244|ref|ZP_05704478.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520482|gb|EEV89341.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 923

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 99/276 (35%), Gaps = 17/276 (6%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
             +    ++ VW D+ T +                 +PADL++ G D     FH+     
Sbjct: 524 HYEKLNDVLDVWFDSGTTHYAVLR------QRDDIGYPADLYLEGSDQHRGWFHSSLLTG 577

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             +  + P    +     +   G K+SKSLGNV++P +VI  +G D LR ++       +
Sbjct: 578 CAIDGHPPYKGLLTHGFTVDESGRKMSKSLGNVVEPQKVINNLGADILRLWVSSADYSAE 637

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
                 + LK+R  AD    I N   R +   L D+D              D   ++   
Sbjct: 638 -VSLSDNILKQR--ADAYRRIRNTC-RFLLANLHDFDPTKHAVPTDELLALDRYAIARAD 693

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTV 452
            + + I    +N   H    Q+ +   V     Y D  K  +    T+     +      
Sbjct: 694 ALQKTIIAAYENYEFHLIYQQLFNFCAVEMGGFYLDIIKDRQYTIATDNRARRSAQTAIW 753

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
            ++  +   L   +   A +I+  +  A E   F S
Sbjct: 754 HILEAMVRWLAPILSFTAEEIWQHMPGAREESVFLS 789



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  K  +     Y N   H+GHA   I+ D++ +   L G +  +  G D HG  I +  
Sbjct: 47  DAPKFILHDGPPYANGAIHVGHALNKILKDIITKSRHLLGFNSPYIPGWDCHGLPIEQKV 106

Query: 63  QNAGVTT 69
           +      
Sbjct: 107 EQQIGKP 113


>gi|254409885|ref|ZP_05023665.1| isoleucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196182921|gb|EDX77905.1| isoleucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 1163

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/298 (18%), Positives = 101/298 (33%), Gaps = 35/298 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ ++      +       +   +P D+++ G D     F +    +   +   P
Sbjct: 579 MDVWFDSGSS------WAGVVQEREELSYPVDMYLEGSDQHRGWFQSSILTSVATNGCAP 632

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREIACG 336
               +     +  +G K+SKS+GNV+DP  +             G D LR ++       
Sbjct: 633 YKSVLTHGFVLDEQGRKMSKSVGNVVDPATIIEGGKNHKQEPPYGADMLRLWVSS----- 687

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESIL 391
               Y  D    +      + I   +  +   +L +     P   A       E D  +L
Sbjct: 688 --VDYSVDVPIGQGILKQLSDIYRKIRNTARFLLGNLHDFDPAKNAVAYEQLPELDRYML 745

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTV 447
              + V  E+ E   +    R    V +   V   + Y D  K   L  ++PD  R  + 
Sbjct: 746 HRITEVFGEVTEAFDSYQFFRFFQTVQNFCVVDLSNFYLDMAKD-RLYISHPDSVRRRSC 804

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-FQSLDQRLKPGFMLHKTFD 504
             V    +  LA  +   +   A  I+  L      +  F+S   +L   +   +  +
Sbjct: 805 QTVLAIALENLARSIAPVLCHTAEDIWQYLPYPTPYKSVFESGWVQLDETWKKPELVE 862



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +     Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I      A 
Sbjct: 53  FILHDGPPYANGALHIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQAM 112

Query: 67  V-------TT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
                   T        + F  +     R       +   +D    T    +      ++
Sbjct: 113 DAEERQALTPIKLRRKARKFALKTVDQQRQGFQRYGVWGDWDHPYLTLTPEYEAAQIGVF 172

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  KG IY+G     +S   +    + E+  
Sbjct: 173 GQMVLKGYIYRGMKPVHWSPSSQTALAEAELEY 205


>gi|89098730|ref|ZP_01171612.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086692|gb|EAR65811.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 923

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/465 (14%), Positives = 140/465 (30%), Gaps = 40/465 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SY 91
           F+      +      D+ G    +A    G+         +   ++   +L +     SY
Sbjct: 333 FYVGQKYGLEVLCPVDDKGLMTNEAEGFEGLFYDEANKPITEALKEKGALLGLKFITHSY 392

Query: 92  DDFIRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
               RT +          +   K   ++            +  +   +N           
Sbjct: 393 PHDWRTKKPVIFRATAQWFASIKDFRNELLEAVKETKWVPAWGETRLFNMVRDRGDWCIS 452

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
              A   P+     E     ++      +S               N         L    
Sbjct: 453 RQRAWGVPIPVFYAENGDSIITDETIDHVSALFREHG-------SNIWFEKEAKELLPEG 505

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            +      G         IM VW D+ +++                  PADL++ G D  
Sbjct: 506 FTHPGSPNG--KFTKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQY 557

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F++    +  ++   P    +     +  +G K+SKS+GNV+ P +V+ ++G D LR
Sbjct: 558 RGWFNSSLSTSVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMNQLGADILR 617

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---- 382
            ++        D       LK+         +   +  +   +L +     P   A    
Sbjct: 618 LWVASVDYQA-DVRVSDPILKQ------VAEVYRKIRNTFRFLLGNLADFNPEKDAVVFE 670

Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKK 438
              E D+ +L   +++++ ++E             + +         Y D  K    ++ 
Sbjct: 671 NLREVDQFMLVKLNKLVKNVKEAYDRYEFAGIYHAINNFCTLDLSSFYLDFAKDVLYIEA 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +      +  V  E +  LA L    +   A++++  +  A E 
Sbjct: 731 EDNADRRAIQTVLYESLVALAKLTAPILSHTADEVWSFIPAAKEE 775



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPMFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFHAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
             N GV  K                +   + R     L +  D      T + ++     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCEEYAYEQVDSQRSQFKRLGVRGDWENPYITLQPQYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 KVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|315303474|ref|ZP_07874061.1| leucyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628156|gb|EFR96702.1| leucyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 806

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYEHGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 206

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 207 DLELVDWPENIKDMQRNWIGRSE 229



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 500 WYFLRYIDPKNKDAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 559

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 560 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNE 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+              + R   +++   +         TE + ++     ++++ +  
Sbjct: 620 NGLEGS---------RKFLDRIWRLLV--TEEGTLAEKVTTEPNANLEKAYHQMVKTVTN 668

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                       +  E I     LL 
Sbjct: 669 HYENLRFNTGISQLMIFINEAYK--------------------QPSIPKEYIEGFVQLLS 708

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 709 PIAPHLAEELWEILGHTE 726


>gi|332038498|gb|EGI74942.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 942

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 102/279 (36%), Gaps = 17/279 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     Q  + VW D+  ++             +    PADL++ G D     F +    
Sbjct: 529 KQYMKVQDTLDVWFDSGVSHACVVD------AREDLVGPADLYLEGSDQHRGWFMSSMMT 582

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  ++ + P  + +     +   G K+SKSLGNVI P  V+ ++G D LR ++       
Sbjct: 583 SVAINGHAPYRQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVASTDYTA 642

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVC 394
           +      +  K+   AD    I N  SR +   L  ++            E D+ I+   
Sbjct: 643 EMTV-SDEIFKRS--ADRYRRIRNT-SRYLLANLNGFNPETDQVAVDDMVELDKWIVGRA 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRASTVLYVT 451
           +++  EI     +  +     ++++         Y D  K  +   K++     +     
Sbjct: 699 AQLQDEILAAYDSYQMLLVTQKLMNFCTGELGSFYLDVIKDRQYTAKSDSHARRSCQTAL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             +   +   +   +   A +I++ L     +  F S+ 
Sbjct: 759 YHIAEAMTRWMAPIMSFTAQEIWEALPGERSDYVFTSVW 797



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GH+   I+ D++ +   L   D     G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGDIHLGHSVNKILKDIIVKSKTLSDFDSPLVPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T         
Sbjct: 106 VEKKVGKPGVKVTASEFREKCRAYAKKQVEGQKVDFKRLGVFADWDKPYLTMNFDFEANA 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +I +KG ++KG     +     +   + EV  
Sbjct: 166 IRVLGRIIEKGHLHKGAKPVHWCTDCGSALAEAEVEY 202


>gi|256394874|ref|YP_003116438.1| isoleucyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256361100|gb|ACU74597.1| isoleucyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 1073

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 101/276 (36%), Gaps = 10/276 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNP--DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           ++  W D+ +      GY             +PAD      D     F+++     L+  
Sbjct: 526 VIDGWYDSGSMPFAQHGYPYAEGSKEKFENAYPADFIAEAIDQTRGWFYSLLAVGTLVFD 585

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
                  +     +   G K+SK LGN+++PI ++++ G DA+R+F++   +        
Sbjct: 586 KSSYKNVLCLGHILAEDGRKMSKHLGNILEPIPLMDQHGADAVRWFMLAGGSPWSARRVG 645

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQE 400
              +++ V   L      +  +++      +      P P      D  +LS  + ++++
Sbjct: 646 HATIQEVVRKTLLTYWNTVSFQALYGRTAGWSPSAGDPEPAERPALDRWVLSELNVLVRD 705

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +   M      +    + + V ++  ++  +        +P   +T      E +  +  
Sbjct: 706 VTAAMDEFDTLKVGKLLSAFVDDLSNWYVRRARRRFWNADPAALAT----LHEALEAVTK 761

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           L+   VP +  +++  L    +    +S+     P 
Sbjct: 762 LMAPMVPFITERVWQDLVRPVDAEAPESVHLAAWPA 797



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
               N +P  H  H    +  DV  RF  + G  V    G D HG  +  A +     T+
Sbjct: 54  PPTANGRPGTH--HVEARVFKDVFPRFKTMQGHRVDRKAGWDCHGLPVELAVEAELGFTQ 111

Query: 71  -----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                              V ++   F  + + +   ++ D+   T    + ++     K
Sbjct: 112 KQDIEAYGIAEFNAKCRESVRRHVDAFEKLTERMGYWVNTDEAYWTMNPSYVESVWWSLK 171

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +I DKG + +      Y  R     +D E+ +G +
Sbjct: 172 QIFDKGLLVQDHRVAPYCPRCGTGLSDHELAQGYE 206


>gi|327354625|gb|EGE83482.1| valyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1050

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 124/443 (27%), Gaps = 71/443 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRD-------EAYYNDDEVYKGADGQYYNAQ- 153
             D    + + + +KG   K   +              E            D      + 
Sbjct: 422 RFDARYKVIEALKEKGLYVKWENNPMKVPMCAKSNDVIEPILKPQWWMSMKDLTGPAIKA 481

Query: 154 ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++    E  +FR     +      +       P                +L +
Sbjct: 482 VESGEIIIRPETAEKSYFRWMNNINDWCLSRQLWWGHQAPAYFVQLEGEHGDDSDGNLWV 541

Query: 210 ------------SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                         K       +  DP  ++  W  +     +T G+  N      + +P
Sbjct: 542 VGRTEAEAQQKAEAKFVGKKFTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFERLYP 599

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             +   G DIL F    +      ++  +P  +          +G K+SKSLGNV++PI+
Sbjct: 600 TSVLETGWDILFFWVARMIMLGLKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVVNPID 659

Query: 316 VI-------------------------------------EEVGVDALRYFLVREIACGKD 338
           VI                                      E G DALR+ LV     G D
Sbjct: 660 VIEGIELQVLHDKLKHGNLAEKEIAAATRYQKKAFPKGIPECGTDALRFALVSYTTGGGD 719

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
             +D   +         N I       +  + +D+         G  + S+  IL   + 
Sbjct: 720 INFDIQVI--HGYRRFCNKIYQATRYVLGKLGEDFKPQATPSKTGKESLSERWILHKFNS 777

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   EN++++    A + +         D + +  K         +   +        
Sbjct: 778 AAKLANENLESRDFSVAASVLYQYWYSQLCDVFIENSKSLLQADVPAEVQQSAKETLYTA 837

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     L+   +P +  +++  L
Sbjct: 838 LEGALTLIHPIMPFVTEELWQRL 860



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE+ K  I           H+GH     + D + R+ R+ G  VL+  G D  G     
Sbjct: 122 VKEKGKFVIPIPPPNVTGDLHMGHGLTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 181

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 182 VVEKILWKTEGKSRHDVGREAMTNMIWDWTHKYHDSITTTLKRLGGSFDWTREAFTMDEN 241

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 242 LSAAVTETFVRLHEEGTIYRANRLVNWC 269


>gi|239607777|gb|EEQ84764.1| valyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 1050

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 124/443 (27%), Gaps = 71/443 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRD-------EAYYNDDEVYKGADGQYYNAQ- 153
             D    + + + +KG   K   +              E            D      + 
Sbjct: 422 RFDARYKVIEALKEKGLYVKWENNPMKVPMCAKSNDVIEPILKPQWWMSMKDLTGPAIKA 481

Query: 154 ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++    E  +FR     +      +       P                +L +
Sbjct: 482 VESGEIIIRPETAEKSYFRWMNNINDWCLSRQLWWGHQAPAYFVQLEGEHGDDSDGNLWV 541

Query: 210 ------------SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                         K       +  DP  ++  W  +     +T G+  N      + +P
Sbjct: 542 VGRTEVEAQQKAEAKFVGKKFTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFERLYP 599

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             +   G DIL F    +      ++  +P  +          +G K+SKSLGNV++PI+
Sbjct: 600 TSVLETGWDILFFWVARMIMLGLKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVVNPID 659

Query: 316 VI-------------------------------------EEVGVDALRYFLVREIACGKD 338
           VI                                      E G DALR+ LV     G D
Sbjct: 660 VIEGIELQVLHDKLKHGNLAEKEIAAATRYQKKAFPKGIPECGTDALRFALVSYTTGGGD 719

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
             +D   +         N I       +  + +D+         G  + S+  IL   + 
Sbjct: 720 INFDIQVI--HGYRRFCNKIYQATRYVLGKLGEDFKPQATPSKTGKESLSERWILHKFNS 777

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   EN++++    A + +         D + +  K         +   +        
Sbjct: 778 AAKLANENLESRDFSVAASVLYQYWYSQLCDVFIENSKSLLQADVPAEVQQSAKETLYTA 837

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     L+   +P +  +++  L
Sbjct: 838 LEGALTLIHPIMPFVTEELWQRL 860



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE+ K  I           H+GH     + D + R+ R+ G  VL+  G D  G     
Sbjct: 122 VKEKGKFVIPIPPPNVTGDLHMGHGLTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 181

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 182 VVEKILWKTEGKSRHDVGREAMTNMIWDWTHKYHDSITTTLKRLGGSFDWTREAFTMDEN 241

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 242 LSAAVTETFVRLHEEGTIYRANRLVNWC 269


>gi|313904295|ref|ZP_07837673.1| leucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470845|gb|EFR66169.1| leucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 805

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 109/283 (38%), Gaps = 49/283 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSAN-------- 283
                +          D  K ++W P D +  G + +  H +Y   +             
Sbjct: 501 WYFLRFCDPHNENAFADKKKLEYWMPVDHYNGGMEHVTRHLLYSRFWHQFLYDIGEVTTP 560

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K+ +    +   GEK+SKS GNVIDPI++++  G DALR +++          ++ 
Sbjct: 561 EPYAKRTYQGMILGSDGEKMSKSKGNVIDPIDIVKVYGADALRTYVMFMGDYASAAPWND 620

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + LK         G    + R  ++                + D  + S   + ++++ E
Sbjct: 621 ESLK---------GCKRFLDRVAALT---------DIATAEKEDPKLESSLHKTIKKVSE 662

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A+A ++SL++E  +                       +T   +     LL 
Sbjct: 663 DIENMKFNTAIAALMSLINEFTK--------------------AGSITKNDLVVFIKLLS 702

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            F P +  +I+  L + ++ + F ++ +   P +   KT D +
Sbjct: 703 PFAPHMTEEIWQQLGMNEDGKTFLTVSE--WPSYDEAKTVDSV 743



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 7/180 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+    H+GH       +VL+R  R+ G +VLF  G D  G      A
Sbjct: 30  KKKWYGLVEFPYPSGAGMHVGHIKAYSSIEVLSRKRRMQGYNVLFPIGFDSFGLPAENYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                      ++N  +F +    +  S+  D    T+ K ++   + +++K+ +KG ++
Sbjct: 90  IKTNTHPHDITEKNIEHFTEQLKSVGFSFDWDREFATSRKDYYKWTQWIFEKLYEKGLVF 149

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      Y    +   +++     + G   +  H+ V  + ++ +F R++ Y D+LLS  
Sbjct: 150 RSKTLVNYCPHCKVVLSNE----DSQGGKCDICHSDVVQLSKDVWFLRITDYADRLLSGL 205


>gi|149732348|ref|XP_001491771.1| PREDICTED: similar to valyl-tRNA synthetase 2 [Equus caballus]
          Length = 1264

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R           L
Sbjct: 705  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRSEAEAL 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +     +   G  +  D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSEPGGHESLVDRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
              +                  + ++           L  S D + R   T + +     
Sbjct: 397 WREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 455

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 TEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|298245564|ref|ZP_06969370.1| leucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553045|gb|EFH86910.1| leucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 824

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 5/194 (2%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   Y      YP+   H+GH Y     D   R  R+ G +V+   G D  G     AA 
Sbjct: 34  KPDFYHLVMFPYPSGDLHMGHWYNYSPFDAYGRLKRMQGYNVMQPIGFDAFGLPAENAAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  + +   N  N R     +   +D    + T    ++   + L+ +    G  Y+
Sbjct: 94  KRGVQARTWTLANIENMRKQLQAMGAGWDWSREVITCLPDYYKWTQWLFLQFYKHGLAYR 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V             + V+  E + +  ++SAY ++LL + +
Sbjct: 154 TKAPANWCPGCNTTLANEQVLAD---GTCERCGSVVERREIDQWLLKISAYAEELLKFED 210

Query: 182 SHPEFILPIERRNE 195
                     +RN 
Sbjct: 211 IEWPEKTVTMQRNW 224



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 111/358 (31%), Gaps = 44/358 (12%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + E++G            L              R  E            
Sbjct: 432 QRYWGCPIPVVYCEKDGLVPVPEDQLPVRLPENVQFKSTGESPLRYEESFLNTTCPTCGG 491

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKD 266
             +R+          D              Y       +     + + W P D +V G +
Sbjct: 492 PATREA---------DTMDTFICSSWYYLRYADPHNDQEAWSQEQMRKWLPVDQYVGGVE 542

Query: 267 ILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
               H +Y   F         L+   P  +       +   G+K+SKS GNV  P + IE
Sbjct: 543 HAILHLLYSRFFTKALRDMGHLNFGEPFKRLYHQGMVLGPDGQKMSKSRGNVEAPDKYIE 602

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
             G D +R +++        G +  + L+         G+   ++R  S++ +       
Sbjct: 603 TYGADTVRCYMMFIGPFEAGGSFKAENLE---------GVWRFLNRFWSLVTE--SWTDN 651

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                T   +++  +  + ++ I E++ N   + ALA ++    E +          L K
Sbjct: 652 PSTEKTTESKAVERLRHKTIKRITEDLSNFRFNTALAALM----ECNN--------ALIK 699

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRLK 494
              +  +         +  +  LL    P +A +++             + + D+ + 
Sbjct: 700 QQHEPVARTAAF-QRALETMMQLLAPLAPHIAEELWHQTGHEGSIHLSTWPAFDEAMT 756


>gi|313623483|gb|EFR93684.1| leucyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 803

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLELVDWPENIKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 97/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 557 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++ +   +       T+++ ++      +++ +  
Sbjct: 617 NGLE---------GARKFLDRIWRLLVSEEGTL--AEKVTTDANTNLEKAYHHMVKTVTN 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 666 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VKLLS 705

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 706 PIAPHLAEELWEILGHTE 723


>gi|307128524|ref|YP_003880554.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482986|gb|ADM89856.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 1128

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 96/271 (35%), Gaps = 14/271 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       I+ VW D+         Y         K KF+PAD    G D     F  ++
Sbjct: 590 KPMIRESDIIDVWFDSGAMPYAQLHYPFENQFLIDKKKFFPADFICEGVDQTRGWFFTLH 649

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + +L  ++     + +   +  KG+K+SKS GN I+P E+I++ G D +R++ +   +
Sbjct: 650 TISCILFNSISFKNVISNGLVLDKKGKKMSKSRGNTINPFEIIKKYGPDTIRWYFISNSS 709

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-----SDES 389
              +  ++ + ++  +       + N+ S     I  + D                 D+ 
Sbjct: 710 PWGNIKFNIEKIEN-IKKKFFGTLYNVYSFFA--IYANIDNFKYKEKEIKLKNRPTIDKW 766

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTV 447
           ILS  + ++++      N    +   ++   V  +  + Y    +    K    +   + 
Sbjct: 767 ILSELNTLIKKTDNYYNNYEPTKVARKIEVFVIDNLSNWYIRLSRRRFWKGNYTNNKISA 826

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                  +  +  +     P      +  L 
Sbjct: 827 YQTLYTCLLTIYKISSPIAPFFMENFYKNLN 857



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 20/147 (13%)

Query: 2   KEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +  +KLY+        N  P I H     I D+  R++ L G  V    G D HG  +  
Sbjct: 34  RNNKKLYVFYEGPPSANGSPGIHHILSRTIKDIFCRYNTLKGKKVTRKAGWDTHGLPVEL 93

Query: 61  AAQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
             +                       K  V + S  ++ ++  L   I  D    T + +
Sbjct: 94  VVETKLGITKNDIGKKISIYTFNKKCKEAVMRYSNEWKKLSKHLGYWIYLDKPYYTFKTK 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWY 128
           + +T   L K I  K  +YKG     Y
Sbjct: 154 YIETIWWLLKNIYKKKFLYKGYKIQPY 180


>gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 928

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 137/412 (33%), Gaps = 35/412 (8%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                    W+  +         +        +   ++ E  +          HN V   
Sbjct: 392 EIRHQYPHCWRCKNPVIFRATEQWFASIDKFRQEMLDEIEKVQWIPSWGKQRIHNMVAER 451

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR--------- 211
           ++     +        + Y E+  E ++  +  + V    +     +  +R         
Sbjct: 452 QDWCISRQRVWGVPIPIFYCETCGETVIDDQTIDHVARLFEQHGSQVWFAREAKDLLPEG 511

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G         IM VW D+ ++++                WPAD+++ G D     
Sbjct: 512 YRCRCGGDSFRKETDIMDVWFDSGSSHMAVLERRP------ELRWPADMYLEGSDQHRGW 565

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A  +    P    +     +  +G K+SKSLGNV+DP+EV++ +G D LR ++
Sbjct: 566 FNSSLSTAVAVKGQAPYRAVLTHGFLLDGEGRKMSKSLGNVVDPLEVMDRLGADILRLWV 625

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFT 384
              +    D       LK+         +   +  +   +L + +G  P          T
Sbjct: 626 A-SVDYRSDARVSDAILKQ------VAEVYRKIRNTFRFLLGNLNGFDPAAHRTSYEHMT 678

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL--KKTN 440
           E D   L    R+++      +N   H     V +   V     Y D  K      ++ +
Sbjct: 679 ELDRWALDQLQRLVERTSAAYRNYEFHLVFHAVHNFCAVQMSAFYLDVLKDRLYCSREAD 738

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
           P R  +      E++  L  L+   +   A++++  +  V   +   +   Q
Sbjct: 739 PIR-RSAQTAMYEILVTLVKLVAPIISHTADEVWGYIPGVKGPSAQLEDWPQ 789



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +F  +DG +  +  G D HG  I  A
Sbjct: 45  RGRPKFILHDGPPYANGNIHVGHALNKILKDMIVKFKTMDGFEAPYVPGWDTHGLPIEHA 104

Query: 62  AQNAGV-------------TTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
              +                 + +  +     R     L +   +D    T E  +    
Sbjct: 105 IIKSKNLNRHEIDVLEFREMCRQYALEYIDRQRGQFKRLGVRGDWDHPYMTLEPGYEAVQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             ++ +++ KG IY+G    ++    E    + E+              PV
Sbjct: 165 IRVFGEMAKKGYIYQGLKPVYWCPSCETALAEAEIEYRDKVSPSIYVKFPV 215


>gi|237797256|ref|ZP_04585717.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331020106|gb|EGI00163.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 499

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 131/391 (33%), Gaps = 39/391 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGME 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKG-----D 118
            GV      + NS         + I  D+++R  +     +    ++  +   G     D
Sbjct: 63  LGVDPVALANSNSDRIEASLAAIGIEPDNWMRPYDNPWFAEAVGEVFGALQAAGSIDFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+      Y G                     G +      P QW
Sbjct: 123 SSEPYCPACDVWGYEAFARGHCNYCGAESDASQCENCAQAPDAGLMTGLHCKLCKQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L          +      +  +      L D  ++R   D G+ 
Sbjct: 183 QTAHRAFLKLADFKPQLRDRLLGQQWRVP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQVDGSCRVHTWFMGLAGYMAAFREYAHNVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSA-NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +  ++ + ++   + F+   G  +S S  + I   ++  +   D+ R +L  
Sbjct: 298 IVYPAQLSALPDIKVRQRFVPNQFLKLDGVNLSTSRNHAIWVSDLTRQACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                 +G +         +A        L+
Sbjct: 358 IAPEDNEGDFRLADFLAWRDALFNQFFPALL 388


>gi|261198016|ref|XP_002625410.1| valyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239595373|gb|EEQ77954.1| valyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 1050

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 124/443 (27%), Gaps = 71/443 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRD-------EAYYNDDEVYKGADGQYYNAQ- 153
             D    + + + +KG   K   +              E            D      + 
Sbjct: 422 RFDARYKVIEALKEKGLYVKWENNPMKVPMCAKSNDVIEPILKPQWWMSMKDLTGPAIKA 481

Query: 154 ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++    E  +FR     +      +       P                +L +
Sbjct: 482 VESGEIIIRPETAEKSYFRWMNNINDWCLSRQLWWGHQAPAYFVQLEGEHGDDSDGNLWV 541

Query: 210 ------------SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                         K       +  DP  ++  W  +     +T G+  N      + +P
Sbjct: 542 VGRTEVEAQQKAEAKFVGKKFTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFERLYP 599

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
             +   G DIL F    +      ++  +P  +          +G K+SKSLGNV++PI+
Sbjct: 600 TSVLETGWDILFFWVARMIMLGLKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVVNPID 659

Query: 316 VI-------------------------------------EEVGVDALRYFLVREIACGKD 338
           VI                                      E G DALR+ LV     G D
Sbjct: 660 VIEGIELQVLHDKLKHGNLAEKEIAAATRYQKKAFPKGIPECGTDALRFALVSYTTGGGD 719

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
             +D   +         N I       +  + +D+         G  + S+  IL   + 
Sbjct: 720 INFDIQVI--HGYRRFCNKIYQATRYVLGKLGEDFKPQATPSKTGKESLSERWILHKFNS 777

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
             +   EN++++    A + +         D + +  K         +   +        
Sbjct: 778 AAKLANENLESRDFSVAASVLYQYWYSQLCDVFIENSKSLLQADVPAEVQQSAKETLYTA 837

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +     L+   +P +  +++  L
Sbjct: 838 LEGALTLIHPIMPFVTEELWQRL 860



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE+ K  I           H+GH     + D + R+ R+ G  VL+  G D  G     
Sbjct: 122 VKEKGKFVIPIPPPNVTGDLHMGHGLTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 181

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 182 VVEKILWKTEGKSRHDVGREAMTNMIWDWTHKYHDSITTTLKRLGGSFDWTREAFTMDEN 241

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 242 LSAAVTETFVRLHEEGTIYRANRLVNWC 269


>gi|122066259|sp|P43824|SYI_HAEIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 941

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEKMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|72068860|ref|XP_791854.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS),
           partial [Strongylocentrotus purpuratus]
 gi|115933952|ref|XP_001191605.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS),
           partial [Strongylocentrotus purpuratus]
          Length = 248

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K Y+ +   YP+ + H+GH     I+D +A FHRL+G  VL   G D  G     AA
Sbjct: 41  DRDKFYVLSMFPYPSGKLHMGHVRVYTISDTIAHFHRLNGKQVLHPMGWDSFGLPAENAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            + G+    +   N    R          +++  + T    ++   + ++ ++ + G  Y
Sbjct: 101 IDRGLQPADWTHSNIDYMRRQLKQLSFCFNWEREVTTCLPDYYRWTQSIFVRLLEAGLAY 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D+     ++V +        A+   V+    + +F +++ Y   LL   
Sbjct: 161 QKEAVVNWDPVDQTVLAKEQVDENGCSWRSGAK---VEQRLLKQWFLKMTHYSKSLLEGL 217

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +  P++   I+          SG
Sbjct: 218 DDLPDWPSGIKSMQANWMGDCSG 240


>gi|227329317|ref|ZP_03833341.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 921

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 135/399 (33%), Gaps = 42/399 (10%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGY 165
           K +    +  +  Y   +  +    +       V     G    +  +   VQW+ + G 
Sbjct: 374 KGMLLHVEKLQHSYPCCWRHKSPIIFRATPQWFVSMDQKGLRKQSLSEIKGVQWIPDWGQ 433

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               +   ++          + +P+     +  E +    + L +    R     GI+  
Sbjct: 434 ARIEAMVANRPDWCISRQRTWGVPMSLFVHKETEELHPRTAELIEAVAKRVE-ADGIQAW 492

Query: 222 DDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            D                    + VW D+ + + +         G +     AD+++ G 
Sbjct: 493 WDLDPADVLGADADNYVKVPDTLDVWFDSGSTHSSVVDVRPEFSGHE-----ADMYLEGS 547

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D
Sbjct: 548 DQHRGWFMSSLMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGAD 607

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPG 381
            LR ++      G+    D+     + +AD    I N   R +   L  +D       P 
Sbjct: 608 ILRLWIGSTDYSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPQKDSVKPE 663

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +S      +EI E  ++   HR + +++   S      Y D  K  +   K
Sbjct: 664 DMVVLDRWAVSCAKAAQEEILEAYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAK 723

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++     +       +   L   +   +   A++I++ L
Sbjct: 724 SDSVARRSCQTALYHISEALVRWMAPIMSFTADEIWNYL 762



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 30  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 90  VEQLIGKPGEKVSAAEFRAECRKYAAEQVAGQKADFIRLGVLGDWDRPYLTMDFKTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 150 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 186


>gi|320038783|gb|EFW20718.1| isoleucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1079

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/481 (16%), Positives = 159/481 (33%), Gaps = 35/481 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D  G   ++    AG+  K       ++ ++   ++  S     Y    R+     
Sbjct: 345 PNPVDNRGCFTSEVPDFAGLHVKAADKGIIKHLKEAGRLVVESQITHSYPFCWRSDTPLI 404

Query: 103 HDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + KI           +G Y     ++D  + +     +  +         P+ 
Sbjct: 405 YKAVPAWFVKIEPIIPDMLKGIEGSYWVPSFVKDRRFASWIANARDWNISRNRYWGTPIP 464

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E Y   ++    + L     +   +  + R N     +         SRK    G 
Sbjct: 465 LWVSEDYEEIVAVGSVEELKELSGYTGELTDLHRDNIDHITI--------PSRK----GK 512

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            +    + I   W ++ +    +  Y           +P D    G D     F+ +   
Sbjct: 513 GVLRRVEEIFDCWFESGSMPYASKHYPFENKEEFQNSFPGDFIAEGLDQTRGWFYTLTVL 572

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L   LP    V +   +   G+K+SK L N  DP  ++E  G DALR +L+      
Sbjct: 573 GMHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMERYGSDALRLYLINSPVVR 632

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRS-----VSMILKDYDGMIPTPGAFTE---SD 387
            +   + + G+K+ V   L   + N          +   +++ D +       T     D
Sbjct: 633 AEPLRFKESGVKEVVAKVLLP-LWNSYKFFDGQVVLLKKVENLDYVFDPTMEATNTNVMD 691

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAST 446
             IL+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   +    
Sbjct: 692 RWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGELGLEDTKH 751

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            L    EV+  L   L  F P + + I+  L +    +  Q +D R        +  + +
Sbjct: 752 ALNTLFEVLYTLVRGLAPFTPFITDTIYLRL-LPHIPKSLQGVDNRSVHFLPFPEVREEL 810

Query: 507 F 507
           F
Sbjct: 811 F 811



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFFDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V + +  +R   D L   I +D+  +T    +
Sbjct: 90  IDKSLGMSGSEAVEKLGLAEYNAKCKAIVMRFASEWRQTVDRLGRWIDFDNDYKTMNPTY 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K++ DKG +Y+
Sbjct: 150 MESLWWVFKQLYDKGVVYR 168


>gi|284931394|gb|ADC31332.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 805

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 4/201 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+ +  H+GH    +  DV++R+    G +VL   G D  G    +
Sbjct: 27  KNKPKYYILDMFPYPSGKGLHVGHVKAYMATDVISRWKNALGFNVLHPIGWDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGD 118
            A         F  +N  NFR     L  +YD    + TT K +    + ++KK+ +   
Sbjct: 87  YAIQTNNHPAKFTQENINNFRTQLKRLGFNYDYRLEVDTTNKNYFKWTQWIFKKLYEHDL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
            Y+      +  +      ++EV    +G   + + + PV   +   +  +++A+ D+L+
Sbjct: 147 AYQADIEVNWCEQLGTVLANEEVLTDENGNKISERGSYPVIKKKMRQWVLKITAFADQLI 206

Query: 178 SYYESHPEFILPIERRNEVIS 198
              E+          +   I+
Sbjct: 207 DGLENLNWPNSIKAMQVNWIN 227



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 90/236 (38%), Gaps = 45/236 (19%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEK 302
               F P DL+V G++    H +Y   +         +S+  P  K +     +     K
Sbjct: 524 LFDHFMPVDLYVGGQEHAVLHLLYARFWYKFLHQIKIVSSTEPFSKLINQGMILGEDNTK 583

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN+I+P +++   G D +R +++          +         N++  NG    +
Sbjct: 584 MSKSKGNIINPDDLVLSHGADTIRTYVMFMGPLNASLAW---------NSNALNGTRKFL 634

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++    +D +          ++++       L++I ++++N   +  +++++  ++
Sbjct: 635 ERVYNL----FDRVEINDS----INQNLNYDYHNFLKKINKHLENFEFNLVVSEMMIFIN 686

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +     K                    E+I    I+L  F P LA ++   L 
Sbjct: 687 ACYKQTQINK--------------------EMITNFLIVLSFFAPYLAEELNSKLN 722


>gi|169333665|ref|ZP_02860858.1| hypothetical protein ANASTE_00049 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259659|gb|EDS73625.1| hypothetical protein ANASTE_00049 [Anaerofustis stercorihominis DSM
           17244]
          Length = 801

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 7/182 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y      YP+ Q  H+GH       D+++R  R++G +VLF  G D  G     
Sbjct: 29  EDKPKYYALVEFPYPSGQGLHVGHPRPYTALDIVSRKKRMEGYNVLFPMGFDAFGLPTEN 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   GV   +    N  NF+     L  S+D    + TT+ +++   + ++ ++  KG 
Sbjct: 89  YAIKTGVHPAIVTKNNIDNFKRQLKSLGYSFDWQREVDTTDPKYYKWTQWIFLQLFKKGL 148

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            YK  +   +    +    ++EV  G            V    +  +  +++ Y D+L+ 
Sbjct: 149 AYKKEFPINFCTSCKVGLANEEVVNG----VCERCGGEVVRKVKNQWMLKITEYADRLID 204

Query: 179 YY 180
             
Sbjct: 205 DL 206



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 110/336 (32%), Gaps = 50/336 (14%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
           ++  E              L   E         + +                + K    G
Sbjct: 424 RYWGEPIPIINCPHCGFVPLDESELPLTLPDVKDYKPTDDGESPLKNMPEWYNIKCPKCG 483

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAI 273
                +    M  W  +   YL  T   ++ + +  +    +   D +  G +    H +
Sbjct: 484 ADAQRETD-TMPQWAGSSWYYLRYTDPDNDKELASKEAIDYWMNVDWYNGGMEHTTLHLL 542

Query: 274 YWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           Y   +         ++   P  K+      +    EK+SKS GNV++P EVI+E G D L
Sbjct: 543 YSRFWHKFLYDIGVVNTKEPYQKRTSHGMILGENHEKMSKSKGNVVNPDEVIDEFGADTL 602

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           R + +      K   + ++G+K         G    + R   M     DG+        E
Sbjct: 603 RTYEMFIGDFEKVAPWSENGVK---------GCKRFLDRVSKMEDMIVDGV--------E 645

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
             + + ++  + ++++ E+ +    + A+AQ++ L    ++ +D        K N     
Sbjct: 646 YSKELTTLMHQTIKKVSEDFETLKFNTAIAQLMKL---TNQVYDN------GKINRAE-- 694

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                     R   ILL    P L  +++       
Sbjct: 695 ---------FRTFLILLNPVAPHLTEELWQRAGFEG 721


>gi|303317576|ref|XP_003068790.1| Isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240108471|gb|EER26645.1| Isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1079

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/481 (16%), Positives = 159/481 (33%), Gaps = 35/481 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D  G   ++    AG+  K       ++ ++   ++  S     Y    R+     
Sbjct: 345 PNPVDNRGCFTSEVPDFAGLHVKAADKGIIKHLKEAGRLVVESQITHSYPFCWRSDTPLI 404

Query: 103 HDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + KI           +G Y     ++D  + +     +  +         P+ 
Sbjct: 405 YKAVPAWFVKIEPIIPDMLKGIEGSYWVPSFVKDRRFASWIANARDWNISRNRYWGTPIP 464

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E Y   ++    + L     +   +  + R N     +         SRK    G 
Sbjct: 465 LWVSEDYEEIVAVGSVEELKELSGYTGELTDLHRDNIDHITI--------PSRK----GK 512

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            +    + I   W ++ +    +  Y           +P D    G D     F+ +   
Sbjct: 513 GVLRRVEEIFDCWFESGSMPYASKHYPFENKEEFQNSFPGDFIAEGLDQTRGWFYTLTVL 572

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L   LP    V +   +   G+K+SK L N  DP  ++E  G DALR +L+      
Sbjct: 573 GMHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMERYGSDALRLYLINSPVVR 632

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRS-----VSMILKDYDGMIPTPGAFTE---SD 387
            +   + + G+K+ V   L   + N          +   +++ D +       T     D
Sbjct: 633 AEPLRFKESGVKEVVAKVLLP-LWNSYKFFDGQVVLLKKVENLDYVFDPTMEATNTNVMD 691

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAST 446
             IL+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   +    
Sbjct: 692 RWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGELGLEDTKH 751

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            L    EV+  L   L  F P + + I+  L +    +  Q +D R        +  + +
Sbjct: 752 ALNTLFEVLYTLVRGLAPFTPFITDTIYLRL-LPHIPKSLQGVDNRSVHFLPFPEVREEL 810

Query: 507 F 507
           F
Sbjct: 811 F 811



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFFDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V + +  +R   D L   I +D+  +T    +
Sbjct: 90  IDKSLGMSGSEAVEKLGLAEYNAKCKAIVMRFASEWRQTVDRLGRWIDFDNDYKTMNPTY 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K++ DKG +Y+
Sbjct: 150 MESLWWVFKQLYDKGVVYR 168


>gi|261602487|gb|ACX92090.1| valyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 816

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 16/269 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANL 284
           +  VWID+    L  T + ++ +    + +PA L + G DI+R    Y  +   +L+ N+
Sbjct: 470 VADVWIDSSVTVLYLTKFYEDKNV-FNRTFPASLRLQGTDIIRTWLFYTFFRTLMLANNV 528

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G ++SKS GNV+ P++ + + G DA+R  L+ + + G D  +  D
Sbjct: 529 PFTTVLVNGQVLGPDGTRMSKSKGNVVSPLDRVNDFGADAIRMALL-DASIGDDFPFKWD 587

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K +    L   + N        I K     +  P +    D+ IL    + + +    
Sbjct: 588 IVKGKKM--LLQKLWNASRLVYPFIAK---QRLDKPKSLHIVDKWILQEHKKFVTKAINA 642

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +N   +  L ++ +   E   D Y +  K       N  +     Y    +IR + ILL
Sbjct: 643 YENYDFYLVLQELYNYFWEIVADEYLEMIKHRLFDDDNSAK-----YTIQRIIRDIIILL 697

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
               P +  +I+  LF   ++   + L +
Sbjct: 698 HPIAPHITEEIYSRLFGHKKSVLLEELPK 726



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 14/153 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       Q 
Sbjct: 51  PRFVIDTPPPFTSGELHMGHAYWVTIADTIGRFKRLEGYNVLLPQGWDTQGLPTELKVQY 110

Query: 65  AGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRILW 110
                K            + ++  +  ++    L     ++ F  +T E ++    +   
Sbjct: 111 KLGIPKDNRQLFLQKCIEWTEEMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQKSL 170

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +     I        +  + E      EV  
Sbjct: 171 IDMYKMNLIEMREGPVIWCPKCETALAQSEVGY 203


>gi|158521204|ref|YP_001529074.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510030|gb|ABW66997.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 929

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 82/450 (18%), Positives = 138/450 (30%), Gaps = 41/450 (9%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIRTTEKRHHDT 105
            D++G+ I K  Q AG              +             SY    R  +      
Sbjct: 354 VDDNGRFIDKVEQFAGKFVFDADADIIAAMKQNGALIAQKKFTHSYPHCWRCKKPVIFRA 413

Query: 106 CRILWKKISDKGDIYK-----GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
               +  + + G   K        +   +   E  YN   +    D      +     W 
Sbjct: 414 TPQWFVSMDNTGLREKSLKEIDAVTWIPAWGRERIYN--MIAHRPDWCVSRQR----SWG 467

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
                FF        +          +      +         L  L    +      K 
Sbjct: 468 VPITVFFCKDCGAVIMNEAIRDRIFALFTEHGADIWFDTDMKDL--LGDDARCPACSSKE 525

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++                 WPADL++ G D     FH+    A 
Sbjct: 526 LVKETDILDVWFDSGVSHAAVLEQRQ------DLGWPADLYLEGSDQHRGWFHSSLLTAV 579

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +   G+K+SKS+GNVI P  +I++ G + LR ++       +D
Sbjct: 580 GTRGRAPYKSVLTHGFVVDGNGKKMSKSMGNVIAPDAIIKKYGAEILRLWVAASDY-RED 638

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSR 396
                  + +   +D    + N  SR +   L D+  +          E D   L    R
Sbjct: 639 IRISDPIVNQL--SDAYKKVRNT-SRFMLANLYDFSPEKDAVDYSDLPELDRFALLCFGR 695

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW---ELKKTNPDR-ASTVLYV 450
           + +++R        H    ++ +         Y D  K      L  +   R A TV+Y 
Sbjct: 696 LAEKLRTAYDTYEFHVVYHRLYNYCTLDLSAFYLDIVKDRLYTSLPGSKERRSAQTVMYT 755

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            VE I   A L+   +P  A +++  L  A
Sbjct: 756 LVEGI---ARLMAPILPFTAEEVWKFLPAA 782



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 46/167 (27%), Gaps = 18/167 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++   +     Y N   HIG A   I+ D + R  R+ G  V +  G D HG  I   
Sbjct: 45  RDKKPFVLHDGPPYANGHIHIGTALNKILKDFVTRSKRMAGFRVAYVPGWDCHGLPIEHN 104

Query: 62  AQNAGVT-TKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                    K       R          IS                R  +K++   G+  
Sbjct: 105 VDKELGPRKKEVSLLEKRGICRQYAQKFIS--------------IQREEFKRLGVMGEWE 150

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               +  ++          E    A  +       P+ W        
Sbjct: 151 NPYLTMNFAYEA---IIARECCNCAINKSLFRHKKPIYWCCSCNTAL 194


>gi|119186693|ref|XP_001243953.1| hypothetical protein CIMG_03394 [Coccidioides immitis RS]
          Length = 1079

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/481 (16%), Positives = 159/481 (33%), Gaps = 35/481 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D  G   ++    AG+  K       ++ ++   ++  S     Y    R+     
Sbjct: 345 PNPVDNRGCFTSEVPDFAGLHVKAADKGIIKHLKEAGRLVVESQITHSYPFCWRSDTPLI 404

Query: 103 HDTCRILWKKISD----KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + KI           +G Y     ++D  + +     +  +         P+ 
Sbjct: 405 YKAVPAWFVKIEPIIPDMLKGIEGSYWVPSFVKDRRFASWIANARDWNISRNRYWGTPIP 464

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E Y   ++    + L     +   +  + R N     +         SRK    G 
Sbjct: 465 LWVSEDYEEIVAVGSVEELKELSGYTGELTDLHRDNIDHITI--------PSRK----GK 512

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            +    + I   W ++ +    +  Y           +P D    G D     F+ +   
Sbjct: 513 GVLRRVEEIFDCWFESGSMPYASKHYPFENKEEFQNSFPGDFIAEGLDQTRGWFYTLTVL 572

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              L   LP    V +   +   G+K+SK L N  DP  ++E  G DALR +L+      
Sbjct: 573 GMHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMERYGSDALRLYLINSPVVR 632

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRS-----VSMILKDYDGMIPTPGAFTE---SD 387
            +   + + G+K+ V   L   + N          +   +++ D +       T     D
Sbjct: 633 AEPLRFKESGVKEVVAKVLLP-LWNSYKFFDGQVVLLKKVENLDYVFDPTMEATNTNVMD 691

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAST 446
             IL+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   +    
Sbjct: 692 RWILASCQSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGELGLEDTKH 751

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            L    EV+  L   L  F P + + I+  L +    +  Q +D R        +  + +
Sbjct: 752 ALNTLFEVLYTLVRGLAPFTPFITDTIYLRL-LPHIPKSLQGVDNRSVHFLPFPEVREEL 810

Query: 507 F 507
           F
Sbjct: 811 F 811



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFFDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V + +  +R   D L   I +D+  +T    +
Sbjct: 90  IDKSLGMSGSEAVEKLGLAEYNAKCKAIVMRFASEWRQTVDRLGRWIDFDNDYKTMNPTY 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K++ DKG +Y+
Sbjct: 150 MESLWWVFKQLYDKGVVYR 168


>gi|284919807|emb|CBG32862.1| isoleucyl-tRNA synthetase [Escherichia coli 042]
          Length = 938

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 121/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K++     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKSDSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|271964384|ref|YP_003338580.1| isoleucyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270507559|gb|ACZ85837.1| isoleucyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 1054

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 92/261 (35%), Gaps = 10/261 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+ +      G          K +PA       D     F+++     L+    
Sbjct: 525 VIDAWYDSGSMPFAQWGAPYQNADMLEKAYPAQFICEATDQTRGWFYSLMAVGTLVFGRS 584

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                +     +   G K+SK LGNV+ PI ++++ G DALR+++    +          
Sbjct: 585 SYENVLCLGLILAEDGRKMSKHLGNVLQPIPLMDQHGADALRWYMACAGSPWAARRVGHG 644

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMI----PTPGAFTESDESILSVCSRVLQE 400
            L++ V   L          ++    + +        P        D  +L+   R + E
Sbjct: 645 ALEEIVRKVLLTYWNTASFFTLYANAESWSPSRLSEAPPHAERPLIDRWVLAELHRTVAE 704

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +  +M      R   ++   + ++  ++  +        +    ++      E +  +  
Sbjct: 705 VTASMDEFDTARVGRRLAEFLDDLSNWYVRRSRRRFWSGD----ASAFATLYECLETVTR 760

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           L+   VP + + ++D+L   +
Sbjct: 761 LMSPVVPFITDYVWDVLRATE 781



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +             N  P + H    +  DV  R+  + G +V    G D HG  +  A
Sbjct: 39  TDGPNWVFYEGPPTANGMPGVHHVEARVFKDVFPRYKSMQGYNVPRKAGWDCHGLPVEVA 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V ++   F +M + +   I      RT +  +
Sbjct: 99  VEKELGLSGKKDIEEYGVAEFNARCRESVLRHVDAFEEMTERMGYWIDLSQAYRTMDPSY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++     K + DK  +++      Y  R     +D E
Sbjct: 159 VESVWWSLKVVFDKDLLFRDFRITPYCPRCGTGLSDHE 196


>gi|326793616|ref|YP_004311436.1| isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326544380|gb|ADZ89600.1| Isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 940

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 128/403 (31%), Gaps = 34/403 (8%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
             +    I++     + S+ ++   ++ +              N ++ M      + +S 
Sbjct: 410 WRTKTPLIFRATPQWFISMDEKGLLDEAKEAVNGVKWVPTWGQNRMEGMLNNSPDWCVSR 469

Query: 172 YQDK------LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD 223
            +         +           P    +      K G+            G        
Sbjct: 470 QRTWGVPIALFIHKETQELHPDTPRLIEDVAKRIEKVGMDAWFDLTPEELLGDEADSYSK 529

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
               + VW D+   + +           +   +PADL++ G D     F +    +  + 
Sbjct: 530 VTDTLDVWFDSGVTHYSVVD------QREELSFPADLYLEGSDQHRGWFQSSLKTSIAIR 583

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  + +     +   G K+SKSLGNV+ P +V+  +G D +R ++      G+    
Sbjct: 584 GEAPYKQVLTHGFTVDGDGRKMSKSLGNVVSPQKVMSTLGADIIRLWVAATDYTGEMTVS 643

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSR 396
           D+  + KR            +  +   +L + +G  P             D  I+   ++
Sbjct: 644 DE--ILKR-----VADSYRRIRNTARFMLANLNGFDPAKDMVESDQMIALDRWIVDRAAQ 696

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTV 452
           + +EI E       H    ++ +   V     Y D  K      T PD  +  +      
Sbjct: 697 LQKEIEEAYNEYQFHTVNQKIQNFCSVDLGGFYLDVIKD-RQYTTQPDSLARRSAQTALY 755

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
            ++      +   +   A++I+  L     E+   ++  + L 
Sbjct: 756 HIVEAFTRWISPILSFTADEIWRSLPGEHGESVFLETWYEGLT 798



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 13/106 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+   +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGRKPFILHDGPPYANGSIHIGHAVNKILKDIIVKSKTVSGYDAPYIPGWDCHGLPIEHK 105

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF 94
            +                   + +        +     L I  D  
Sbjct: 106 VEQMIGKAGDKVSFKEFRAKCREYAYSQIEEQKKDFIRLGIQGDWE 151


>gi|238755524|ref|ZP_04616863.1| Isoleucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706280|gb|EEP98658.1| Isoleucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 938

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 121/377 (32%), Gaps = 43/377 (11%)

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDL 207
            +   V+W+ + G     +   ++          + +P+     +  E +    + L + 
Sbjct: 436 QEIKDVKWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSTELMEE 495

Query: 208 SLSRKTFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGS 251
              R     GI+   D                    + VW D+ + + +           
Sbjct: 496 VAKRVE-QEGIQAWWDLDPADILGADADHYMKVPDTLDVWFDSGSTHSSVVD----VRPE 550

Query: 252 KAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
                P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN
Sbjct: 551 FNGHTP-DMYLEGSDQHRGWFMSSLMIATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGN 609

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
            I P +V+ ++G D LR ++      G+      + LK+  ++         +  +   +
Sbjct: 610 TISPQDVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFL 662

Query: 370 LKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE- 423
           L + +G  P      P      D   +         I E  +N   H  + +++   S  
Sbjct: 663 LANLNGFDPVQHRVEPEDMVVLDRWAVGRAQAAQAGIIEAYENYDFHLVVQRLMQFCSVE 722

Query: 424 -VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
               Y D  K  +   K +     +       +   L   +   +   A++I++ L    
Sbjct: 723 MGSFYLDIIKDRQYTAKGDSVARRSCQSALFHIAEALVRWMAPIMSFTADEIWNQLPGER 782

Query: 482 ENRCFQSLDQRLKPGFM 498
               F     +   G  
Sbjct: 783 SEYVFTEEWYQGLFGLT 799



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 17/207 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGMAGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVTAAEFRAACRNYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                KI D G ++KG     +     +   + EV Y        + + N V   E    
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEYYDKISPSIDVRFNAVD-AESVAA 224

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
            F +S     +     +   + LP  R
Sbjct: 225 KFGVSGVTGAVSLVIWTTTPWTLPANR 251


>gi|183600976|ref|ZP_02962469.1| hypothetical protein PROSTU_04591 [Providencia stuartii ATCC 25827]
 gi|188019308|gb|EDU57348.1| hypothetical protein PROSTU_04591 [Providencia stuartii ATCC 25827]
          Length = 936

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 127/391 (32%), Gaps = 48/391 (12%)

Query: 122 GCYSGWYSLRDE-AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKL 176
             Y   +  +    +    + + G D      Q     + VQW+   G     S  +++ 
Sbjct: 400 HSYPCCWRHKTPVIFRATPQWFIGMDKNGLREQSLKEIDIVQWIPGWGRARIESMVENRP 459

Query: 177 LSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------- 225
                    +  P+     +  E +      L +    R   D GI+   D         
Sbjct: 460 DWCISRQRTWGTPMSLFVHKETEELHPRTLELMEEVAKRVEVD-GIQAWWDLDAAELLGD 518

Query: 226 ---------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                      + VW D+ + +           G+      AD+++ G D     F +  
Sbjct: 519 EAEIYRKVPDTLDVWFDSGSTHFAVVDARPEYHGNS-----ADMYLEGSDQHRGWFMSSL 573

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  +    P  + +     +  +G K+SKSLGN I P +V+ ++G D LR ++     
Sbjct: 574 MLSTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTISPQDVMNKLGADILRLWVASTDY 633

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDES 389
            G+    D+  + KR     A      +  +   +L + +G  P      P      D  
Sbjct: 634 TGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPETDMVKPEEMVVLDRW 686

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAST 446
            +       +EI +          + +++   S      Y D  K  +   K++     +
Sbjct: 687 AVGRALEAQKEITKAYDEYDFLSVIQRLMHFCSIEMGSFYLDIIKDRQYTAKSDSLARRS 746

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +   L   +   +   A++I++ L
Sbjct: 747 CQTALFHIAEALVRWIAPILSFTADEIWNEL 777



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLAGFDSPYIPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQIVGKPGEKVSAAEFRAQCRQYAKEQIEGQKADFIRLGVLGEWDKPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K    G + KG     +     +   + EV  
Sbjct: 166 IRALAKTIANGHLVKGAKPVHWCTACGSSLAEAEVEY 202


>gi|18312756|ref|NP_559423.1| isoleucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74564220|sp|Q8ZWU4|SYI_PYRAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18160237|gb|AAL63605.1| isoleucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 981

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/310 (20%), Positives = 118/310 (38%), Gaps = 12/310 (3%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            +   K   +      K             Y+M VW+D+   ++      +N      K 
Sbjct: 497 PVDDFKLVHRPWIDQVKISAHDCDEWVREPYVMDVWLDSGIAWIAAVD-GENNRDLWEKL 555

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D    G D     F+++   + L +   P    +     +   G+K+SKS GNVI  
Sbjct: 556 FPYDFVTEGIDQTRGWFYSLLATSVLYTGRAPYKNVLIQGLILDKHGQKMSKSKGNVIWA 615

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKD 372
            ++ E+ G D +R +++ ++A  +D  +D D +K  +     N + N+V  +   M L  
Sbjct: 616 KDLFEKYGADPVRLYILSKVAPWEDLSFDPDEVKYVIGD--LNILWNVVKFADTYMSLDG 673

Query: 373 YDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DR 426
           +D        +     E D+ ILS  + ++ E    ++N   H+A A     V E    R
Sbjct: 674 FDAEKYPLSQWLEKGLEEDKWILSELNIMISEFTNFVKNFEFHKAAALWREFVVETLSHR 733

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           Y    +     +           V  +V++++ IL    VP +   ++       E    
Sbjct: 734 YIRLLRRRVWSEEPSPDKYAAYAVLHDVLKKVLILGSILVPFITEYLWQAYVRKYEKNAP 793

Query: 487 QSLDQRLKPG 496
           +S+     P 
Sbjct: 794 ESVHLAQYPA 803



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 51/164 (31%), Gaps = 24/164 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
            K          N  PH+GH       DV+ RF+RL G DV    G D  G  +      
Sbjct: 41  PKFTFLEGPPTTNGMPHVGHIRGRTYKDVVIRFYRLLGYDVWVQGGWDMQGMPVEWEVEK 100

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNF--RDMADVLDISYDDFIRTTEKRH 102
                          +       +         R +  + +   LD+      R  +  +
Sbjct: 101 KLKLRSKKDIEQFGLEKFALECNSLVEEYLAYWREWGTKRLGLWLDLENAYETR--QPHY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 + K+  + G + +     W+  R E   +D EV  G D
Sbjct: 159 LQYAWRIVKRAHELGLLTEDYRVLWFCPRCETSLSDHEVALGYD 202


>gi|311251894|ref|XP_003124838.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 1188

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/446 (14%), Positives = 133/446 (29%), Gaps = 26/446 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G    +    AG   K       R  ++   +L       I +T    +  C 
Sbjct: 254 VCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLL-------IASTFTHSYPFCW 306

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 307 RSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNR 366

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      D             L      +V    +  +  L++       G  +  
Sbjct: 367 YWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPS---RCGKGLLH 423

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 424 RISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATAL 483

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ +I + G DALR +L+       ++ 
Sbjct: 484 FGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENL 543

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N     +   + +  ++    +       ES    D  +LS
Sbjct: 544 RFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLS 603

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 604 FMQSLIGFFETEMATYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETL 663

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
             V+  L  L+  + P L   ++  L
Sbjct: 664 FSVLLSLCRLMAPYTPFLTELMYQNL 689


>gi|119484252|ref|XP_001262029.1| valyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119410185|gb|EAW20132.1| valyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 1057

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 131/428 (30%), Gaps = 97/428 (22%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
                          ++ ++ + +  ++ ++    +  +   E+    I P         
Sbjct: 447 KWENNPMKIPRCAKSNDVIEPILKPQWWMKMQDLAEPAIKAVENGEIVIKPESAEKNYFR 506

Query: 199 FVKSGLKDLSLSRKTFDWGIK--------------------------------------- 219
           +++ G+ D  LSR+   WG +                                       
Sbjct: 507 WMR-GVNDWCLSRQ-LWWGHQAPAYFVKVEGEDGDDSDGNLWVTGRTEEEARKKAEAKFP 564

Query: 220 -----IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--A 272
                +  DP  ++  W  +     +T G+           +P  +   G DIL F    
Sbjct: 565 GKTFSLIRDPD-VLDTWFSSGLWPFSTLGWPRQTH-DLENLYPTSVLETGWDILFFWVAR 622

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI-------------- 317
           +      L+  +P  K+V+ H  I   +G K+SKSLGNVIDP++V+              
Sbjct: 623 MIMLGIKLTGKVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPLDVMEGIELQSLHAKLLT 681

Query: 318 -----------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
                                   E G DALR+ LV     G D  +D   +        
Sbjct: 682 GNLAEKEVATATKYQKKAFPKGIPECGADALRFALVSYTTGGGDIAFDIQVI--HGYRRF 739

Query: 355 ANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            N I       +  +  D+  +      G  + S+  IL   +  ++E+ E +  +    
Sbjct: 740 CNKIYQATKFVLGRLGDDFKPLPAPSKTGRESLSERWILHKFNTAVKEVNEALAQREFSV 799

Query: 413 ALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS-TVLYVTVEVIRQLAILLQAFVPKL 469
           A +           D + +  K + L    P     +        +     L+   +P +
Sbjct: 800 AASTTYQYWYGQLCDIFIENSK-YLLAPEVPAEVQESAKQTLYTALEGALTLIHPIMPFV 858

Query: 470 ANKIFDIL 477
              ++  L
Sbjct: 859 TEHLWQRL 866



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K + + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 127 KVKPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWERMKGKTTLWLPGMDHAGISTQ 186

Query: 60  KAAQN---------------AGVTTKVFVD--QNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                   T +V+    +   N ++    +  S+D      T + 
Sbjct: 187 SVVEKMLWKKEKKTRHDLGREEFTKRVWTWKDEYHANIKNALRRVGGSFDWSREAFTMDP 246

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 247 NLSAAVTETFVRLHEEGIIYRANRLVNWC 275


>gi|116617750|ref|YP_818121.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272049|sp|Q03YH4|SYL_LEUMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116096597|gb|ABJ61748.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 808

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 10/190 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+EK Y+     YP+ Q  H+GH       D+++R+ R  G +VL   G D  G    +
Sbjct: 28  SEKEKYYVMDMFPYPSGQGLHVGHPEGYTATDIMSRYKRAKGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F ++N + F++    L  S D    I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIKTGNNPAGFTNKNVQVFKNQIKSLGFSIDWSREINTTDPEYYKWSQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWY---SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      +            ++EV  G           PV     + +  R++AY D+
Sbjct: 148 AYEDEIMVNWAPDFPGGGIVVANEEVIDGKT----ERGGYPVYRKPMKQWVLRITAYADR 203

Query: 176 LLSYYESHPE 185
           LL   E    
Sbjct: 204 LLEDLEDLDW 213



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 106/285 (37%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 502 WYFLRYVDPHNSEALADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 561

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P E++   G D LR + +      +   + +
Sbjct: 562 EPFQKLVNQGMILGENHEKMSKSKGNVVNPDEIVNNYGADTLRVYEMFMGPLTQSKPWSE 621

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           DG+               + R   +++ + D +        + D  +  +  + ++++ E
Sbjct: 622 DGVSGS---------RRWLDRVWRLLVDEEDKLRDHVTTVNKGD--LDKIYHQTVKKVSE 670

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  V+E  +                       + V+ +     +L 
Sbjct: 671 DLENMRFNTAISQLMVFVNEAYK--------------------SEALPVQYMDGFVQMLA 710

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              P LA +++  L   +E+  + S         ++  + + IF 
Sbjct: 711 PIAPHLAEELWSKLG-HEEDISYVSWPTY-DESQLVEDSVEIIFQ 753


>gi|307730763|ref|YP_003907987.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585298|gb|ADN58696.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 945

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 20/285 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+   +     I N + R +   L D+D          + E D   +++ + +  +I  
Sbjct: 665 LKRVTES--YRRIRNTL-RFLLANLSDFDYAKNARPVEDWLEIDRYAVALTANLQNDILS 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           +      H  +A++ +  SE     Y D  K   L  T  D  +  +       V + L 
Sbjct: 722 HYDKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYHVAQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE---NRCFQSLDQRLKPGFMLHK 501
            L+  F+   A + + +     E      + +       G +L K
Sbjct: 781 RLMAPFLSFTAEEAWKVFQPDSETIFTETYHAFPAVPDAGTLLDK 825



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   + G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNMAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGEWDNPYKTMNFANEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|148378189|ref|YP_001252730.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932754|ref|YP_001382590.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935447|ref|YP_001386143.1| leucyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166231597|sp|A7FPP5|SYL_CLOB1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231598|sp|A5HY79|SYL_CLOBH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148287673|emb|CAL81738.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928798|gb|ABS34298.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931361|gb|ABS36860.1| leucine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 813

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 91/277 (32%), Gaps = 33/277 (11%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++ I E++     + ++A+++   + + +Y   DA K                    E I
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYLGIDAIKN--------------ALFLRESI 707

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
                LL  F P  A + + ++ +     N  +   D
Sbjct: 708 IDFITLLAPFAPHFAEEQWKLIGINSSIFNEKWPEFD 744


>gi|226323997|ref|ZP_03799515.1| hypothetical protein COPCOM_01774 [Coprococcus comes ATCC 27758]
 gi|225207546|gb|EEG89900.1| hypothetical protein COPCOM_01774 [Coprococcus comes ATCC 27758]
          Length = 808

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 73/197 (37%), Gaps = 7/197 (3%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ++K Y      YP+    H+GH    +I+DV +R+  L G  ++   G D  G      A
Sbjct: 34  KKKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLLQGYYIIHPMGWDAFGLPAENYA 93

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G         N  N +   + +     +D  + TT+   +   + ++ K+  +G  Y
Sbjct: 94  IKMGTHPAKSTAANIANIKRQINEISALYDWDMEVNTTDPDFYKWTQWIFVKMFKEGLAY 153

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +  +   +    +    ++EV     G         V       +  R++ Y D+LL+  
Sbjct: 154 EKEFPINWCPSCKTGLANEEVV----GGKCERCGAEVTKKNLRQWMLRITKYADRLLNDL 209

Query: 181 ESHPEFILPIERRNEVI 197
           +         + + + I
Sbjct: 210 DKLDWPEKVKKMQTDWI 226



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 114/343 (33%), Gaps = 56/343 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 418 YKLRDWVFSRQRYWGEPIPIVHCPECGAVPVPEDQLPLRLPDVESYEPTGTGESPLAGID 477

Query: 212 KTFDWGIKIPDDPQY----IMYVWI---DALTNYLTTTGYLDNPDGSKAK-FWPADLHVI 263
           +  +    +   P       M  W         Y+      +     KA    P D+++ 
Sbjct: 478 EWVNTTCPVCGKPAKRETNTMPQWAGSSWYFLRYVDNHNNEELVSREKADAMLPVDMYIG 537

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +  + P  K           G K+SKS GNV+ P +
Sbjct: 538 GVEHAVLHLLYSRFYTKFLCDIGVIDFDEPFIKLFNQGMITGKNGIKMSKSKGNVVSPDD 597

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           ++ + G D+LR + +       D  +D  G+           + NL+     M  KD D 
Sbjct: 598 LVRDYGCDSLRMYELFVGPPELDAEWDDRGIDGVYR--FLKKLWNLL-----MDSKDKDI 650

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                       + ++ V  +++ +I   +++  ++  ++  +      +      K   
Sbjct: 651 KPT---------KEMIKVRHKLVYDITTRLESFSLNTVISAFME---HTNTLVAIAK--- 695

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            K+   DR         + +  LA+LL  F P +A +I++ L 
Sbjct: 696 -KEGGVDR---------DTLDTLAVLLAPFAPHMAEEIWEELG 728


>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 927

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 17/272 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
             + G    +    IM VW D+ +++ +           +    PAD+++ G D     F
Sbjct: 515 CPECGEIEFEKESDIMDVWFDSGSSHASVLE------IREELERPADIYLEGTDQYRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    +       P    V +   +   G+K+SKS GNV+ P EVI++ G D LR ++ 
Sbjct: 569 NSSLLTSIAYKGEAPYKGVVTNGFTVDANGKKMSKSQGNVVSPHEVIDQYGADILRLWVA 628

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDE 388
                 +D       L++  NA++   I N   R +   + ++D +  T       E D+
Sbjct: 629 SSD-FKEDVRVSDKILQQ--NAEVYRRIRNTF-RYILGNMDNFDPVENTVEYDELLEIDK 684

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK-TNPDRAS 445
             L    +++ EI E  +    H+   +V +  +      Y D  K       T+  +  
Sbjct: 685 WALHKLQKLVDEITEAYEEYDYHKLYHKVHNFCATEMSSFYMDVLKDRLYTSVTDSTKRR 744

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  E++  L  +L   +   A + +  L
Sbjct: 745 AAQTAMYEILTTLIKVLSPVLVHTAEEAWQHL 776



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 52/169 (30%), Gaps = 15/169 (8%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N   HIGHA   ++ D+L R+  L G    +  G D HG  I      
Sbjct: 48  EKFILHDGPPYANGDIHIGHALNQVLKDILTRYKTLQGYQSPYIPGWDTHGLPIEHQITK 107

Query: 65  AGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                               +  +     R+    L     +D+   T +  +      +
Sbjct: 108 ELGDKIEELSTAELREECKNYALKYIDRQREQFKRLGAWGEWDNPYVTLDPEYEAKQIEV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + +I   G + KG    ++         + EV              PVQ
Sbjct: 168 FGEIIKNGYLSKGMKPVYWCPHCNTALAEAEVEYEEARAPSIYVKFPVQ 216


>gi|194390164|dbj|BAG61844.1| unnamed protein product [Homo sapiens]
          Length = 676

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++    N  +W      ++        +     + P    P  R            
Sbjct: 117 HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 176

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 177 EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 234

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 235 HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 294

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L   ++ G+D   D + 
Sbjct: 295 QGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNR 354

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 355 ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 412

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 413 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 471

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 472 LSPFMPFVTEELFQRL 487


>gi|31544637|ref|NP_853215.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|48428524|sp|Q7NB47|SYL_MYCGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|31541482|gb|AAP56783.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930701|gb|ADC30640.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 805

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 4/201 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K YI     YP+ +  H+GH    +  DV++R+    G +VL   G D  G    +
Sbjct: 27  KNKPKYYILDMFPYPSGKGLHVGHVKAYMATDVISRWKNALGFNVLHPIGWDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGD 118
            A         F  +N  NFR     L  +YD    + TT K +    + ++KK+ +   
Sbjct: 87  YAIQTNNHPAKFTQENINNFRTQLKRLGFNYDYRLEVDTTNKNYFKWTQWIFKKLYEHDL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
            Y+      +  +      ++EV    +G   + + + PV   +   +  +++A+ D+L+
Sbjct: 147 AYQADIEVNWCEQLGTVLANEEVLTDENGNKISERGSYPVIKKKMRQWVLKITAFADQLI 206

Query: 178 SYYESHPEFILPIERRNEVIS 198
              E+          +   I+
Sbjct: 207 DDLENLNWPNSIKAMQVNWIN 227



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 90/236 (38%), Gaps = 45/236 (19%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEK 302
               F P DL+V G++    H +Y   +         +S+  P  + +     +     K
Sbjct: 524 LFDHFMPVDLYVGGQEHAVLHLLYARFWYKFLHHIKIVSSTEPFSQLINQGMILGEDNTK 583

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKS GN+I+P +++   G D +R +++          +         N++  NG    +
Sbjct: 584 MSKSKGNIINPDDLVLSHGADTIRTYVMFMGPLNASLAW---------NSNALNGTRKFL 634

Query: 363 SRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            R  ++    +D +          ++++       L++I ++++N   +  +++++  ++
Sbjct: 635 ERVYNL----FDRVEINDS----INQNLNYDYHNFLKKINKHLENFEFNLVVSEMMIFIN 686

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
              +                       V  E+I    I+L  F P LA ++   L 
Sbjct: 687 ACYK--------------------QTQVNKEMITNFLIVLSFFAPYLAEELNSKLN 722


>gi|325921003|ref|ZP_08182886.1| Isoleucyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548510|gb|EGD19481.1| Isoleucyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 943

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   + T           +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHETVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLTGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDDMVLLDRWIVHRAHELQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +  + L P
Sbjct: 777 RWIAPVLSFTAEELWGYLPGKHTDNVLFATWYEGLAP 813



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAQFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|260580052|ref|ZP_05847882.1| isoleucyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093336|gb|EEW77269.1| isoleucyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 941

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEKMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511504|sp|C5D8P2|SYI_GEOSW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 923

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 82/456 (17%), Positives = 153/456 (33%), Gaps = 32/456 (7%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           GLDV      DE G   ++A    G+         ++   ++  +L +S+       + R
Sbjct: 340 GLDV--LCPVDERGYMTSEAPGFEGLFYDEANKAITQKLEEVGALLKLSFITHSYPHDWR 397

Query: 102 HHD------TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
                    T +        +G++ +      +          + +    D      +  
Sbjct: 398 TKKPTIFRATTQWFASIDKIRGELLQAIKETKWIPEWGEIRIHNMIRDRGDWCISRQRA- 456

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                      F     +  +      H   +      N         L     +  +  
Sbjct: 457 ----WGVPIPVFYGENGEPIITDETIEHVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSP 512

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            GI        IM VW D+ +++                  PADL++ G D     F++ 
Sbjct: 513 NGI--FTKEIDIMDVWFDSGSSHQAVLVER------DDLQRPADLYLEGSDQYRGWFNSS 564

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
              A  ++   P  K V SHGF+L  +G K+SKSLGNV+ P +V+E++G D LR ++   
Sbjct: 565 LSTAVAVTGKAPY-KAVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLGADILRLWVASV 623

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESIL 391
                D       LK+   A++   I N     +  +          P     E D  ++
Sbjct: 624 DYQA-DVRISDSILKQV--AEVYRKIRNTFRFMLGNLFDFNPETDAVPVNELREVDRYMI 680

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA-STVL 448
              + +++ ++   +          V +   V     Y D  K     +   DRA  ++ 
Sbjct: 681 VKLNHLIENVKHAYETYDFASIYHDVNNFCTVDLSAFYLDFAKDILYIEAPNDRARRSIQ 740

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
            V  E +  L  L+   +P  A ++++ +    E  
Sbjct: 741 TVLYETVVALTKLVAPILPHTAEEVWEHIPNRKEKE 776



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +  +   N R+    L +  D      T +  +     
Sbjct: 105 LTKKGVDRKSMSVAEFRKLCEQYAYEQINNQREQFKRLGVRGDWENPYITLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPV 214


>gi|155371869|ref|NP_001094539.1| isoleucyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|154426194|gb|AAI51485.1| IARS protein [Bos taurus]
 gi|296484471|gb|DAA26586.1| isoleucine tRNA synthetase [Bos taurus]
          Length = 1262

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/460 (13%), Positives = 137/460 (29%), Gaps = 26/460 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G   A+    AG   K       +  ++   +L       + +T    +  C 
Sbjct: 349 ICPVDASGCFTAEVTDFAGQYVKDADKNIIKTLKEQGRLL-------VASTFTHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +          D  Y+  + V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVEHMVDQLLRNNDLCYWVPEFVREKRFGNWLKDARDWAISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    L      ++    +  +  L++       G  +  
Sbjct: 462 YWGTPIPLWVSSDFEEVVCIGSIAELEELSGTKISDLHRESIDHLTIPS---RCGKGLLH 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   A  L
Sbjct: 519 RVSEVFDCWFESGSMPYAQIHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATSL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ VI++ G DALR +L+       ++ 
Sbjct: 579 FGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSVIDKYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G++  +   L    N     +   + +  ++    +       ES    D  +LS
Sbjct: 639 RFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEVEFLYNENMVKESTNITDRWVLS 698

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               ++      M    ++  + +++  V    + Y    +     +   +     L   
Sbjct: 699 FMQSLVGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGVEDCVKALETL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             V+  L  L+  + P L   ++  L    +    Q  D 
Sbjct: 759 FSVLLSLCRLMAPYTPFLTELMYQNLKTLIDPVSVQDKDT 798



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K R K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHRPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  ++     L   I +D+  +T   + 
Sbjct: 96  IDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWIFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|328861423|gb|EGG10526.1| hypothetical protein MELLADRAFT_33688 [Melampsora larici-populina
           98AG31]
          Length = 1102

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 104/276 (37%), Gaps = 12/276 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             +   W ++ +       Y      +    +PA     G D     F+ +   +  L  
Sbjct: 540 DEVFDCWFESGSMPYAQVHYPFENKETFESAFPAQFIAEGMDQTRGWFYTLLVLSTHLFQ 599

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
             P    V     +   G+K+SKSL N  +P  +I + G D LR FL+       ++  +
Sbjct: 600 KAPWQNLVVCGLVLAEDGKKMSKSLKNYPNPDLIINQHGADPLRLFLINSPVVRGENLRF 659

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMI-----LKDYDGMIPTPGAFTE--SDESILSVC 394
            + G+K+ V   +   + N     +  +     +   D +       +E   D  +L+ C
Sbjct: 660 RETGVKEVVGRVMLPWL-NSYRFFLGQVSLLKKVSKIDFVYDHQAKLSENVMDRWVLARC 718

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +++ +R  M+   ++  + Q++ LV E+ + Y    +     +   + A   L    E
Sbjct: 719 QALIKSVRTEMEAYRLYTVVPQMLDLVDELTNWYIRFNRRRLKGENGAEDAVVALNTLFE 778

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L   L +F P L   I+  L     N   QSL
Sbjct: 779 TLFTLCRTLSSFTPFLTENIYQGLRRFFPNEMIQSL 814



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 21/159 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           ++ R   Y      +    PH GH     + D++ RF   DG  V    G D HG  +  
Sbjct: 53  LRTRWNFY--DGPPFATGLPHYGHLLMGTVKDIVTRFAHADGHYVERRFGWDCHGLPVEH 110

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
                                     +  V + S  +R   + +   I +D+  +T    
Sbjct: 111 EIDKKLQIKSKDDVMRIGIEAYNAECRSIVMRYSSEWRSTIERMGRWIDFDNDYKTLNVD 170

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
             ++   +++++  KG +Y+      YS       ++ E
Sbjct: 171 FMESIWWVFQQLWSKGQVYRASRVMPYSTSCTTPLSNFE 209


>gi|319639594|ref|ZP_07994341.1| valyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399165|gb|EFV79839.1| valyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 943

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 137/415 (33%), Gaps = 75/415 (18%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
           E    F+  +  DK     +S     +P    N   +   + ++D  +SR+   WG  I 
Sbjct: 386 EPDSEFKGLSLADKAKKAVDSGAVRFIPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIP 443

Query: 220 IPDDP-------------------------QYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
              D                          + ++  W  +     +T G+    D  KA 
Sbjct: 444 AWYDEAGNVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAF 503

Query: 255 FWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P+++ V G +I+ F    +       +  +P            H+G+K+SKS GNVID
Sbjct: 504 L-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVID 562

Query: 313 PIEVIEEV-------------------------------------GVDALRYFLVREIAC 335
           P+++I+ +                                     G DALR+ +    + 
Sbjct: 563 PVDLIDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASL 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGMIPTPGAFTESDESILSVC 394
           G+   +D          +  N + N  +  +     KD       P AFT +D+ I+   
Sbjct: 623 GRSVNFDFKR--AEGYRNFCNKLWNATNFVLMNTEDKDCGQDEMQPLAFTFADQWIIGKL 680

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            +    + E  +      A   +  LV     D Y +  K  +++   P    T     V
Sbjct: 681 QQAEAAVAEAFETYRFDLAAQTLYELVWNEYCDWYIELAKV-QIQTGCPTTQRTTRRTLV 739

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
            V+  +  LL   +P +  +++ ++      +   S+     P     +     F
Sbjct: 740 RVLETILRLLHPIMPFITEELWQVVAPLANAKTADSIMLAAYPQADKEQIVQTAF 794



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|330963539|gb|EGH63799.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 499

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 132/391 (33%), Gaps = 40/391 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV   V  ++NS         ++I  D+++R             ++  + D G     D
Sbjct: 63  QGVDPVVLANRNSDRIEASLATINIKPDNWMRPHNNPWFAAAVGEVFTALRDAGAIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+      Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L       P            +      L D  ++R   D G+ 
Sbjct: 183 KTAHRAFLKLAGFRPQLSDRLLGQPWRKPLDSW----LRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGACRVHTWFMGLAGYMAAFREYADSIGRPELFGQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           + +PA   +   + + ++   + F+   G  +S S  + I   ++  +   D+ R +L  
Sbjct: 298 VVYPAQLSVLQGIKVRQRFVPNQFLKLDGLNLSTSRNHAIWVGDLARQACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                 +G +      +    +L NG    +
Sbjct: 358 IAPEDSEGDFRMTHFLE-WRDELFNGFFPAL 387


>gi|226947407|ref|YP_002802498.1| leucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226844262|gb|ACO86928.1| leucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 813

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 92/277 (33%), Gaps = 33/277 (11%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNKNSEAAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++ I E++     + ++A+++   + + +Y   DA K                    E I
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYLGIDAIKN--------------ALFLRESI 707

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
                LL  F P  A + ++++ +     N  +   D
Sbjct: 708 IDFITLLAPFAPHFAEEQWELIGINSSIFNEKWPEFD 744


>gi|224476295|ref|YP_002633901.1| isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782437|sp|B9DPP7|SYI_STACT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222420902|emb|CAL27716.1| putative isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 915

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 116/294 (39%), Gaps = 24/294 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PADL++ G D     F++    A 
Sbjct: 518 FTKEEDIMDVWFDSGSSHRGVLETRP------ELSFPADLYLEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +++++ G D  R ++   +    D
Sbjct: 572 ATRGQSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQIVKQKGADIARLWV-SSVDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+         +   +  ++  +L + +   P   A       E D  +L+ 
Sbjct: 631 VRISDEILKQT------ADVYRKIRNTLRFMLGNVNDFNPETDAVPESDLLEVDRYLLNR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYV 450
                + I  +  N        +V + ++    + Y D  K    ++K +  +  ++  V
Sbjct: 685 LREFTESIINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKQDSHKRRSMQTV 744

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF-VADENRCFQSLDQRLKPGFMLHKTF 503
             +++  +  LL   +   + +++  +  V +E+     + + +KP   L + +
Sbjct: 745 LYQILVDMTKLLAPILAHTSEEVWSYIPHVKEESVHLADMPEVVKPDEELLEKW 798



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGHESYILHDGPPYANGNLHMGHALNKILKDFIVRYKSMQGYYSPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F  +     +     L +   ++D   T +  +     
Sbjct: 105 LTKKGVKRKEMPISEFRKLCEEFALEQIDIQKKDFKRLGVNGDFNDPYITLKPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++D+G IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADRGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|220918010|ref|YP_002493314.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955864|gb|ACL66248.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 832

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA
Sbjct: 33  DADTRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGFDALGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N  +FR     L  S+D    + T +  ++   +  + K+ +KG  Y
Sbjct: 93  IKDGRHPAERTRENVVSFRAEMKRLGYSFDWERELVTADASYYRWNQWFFLKLLEKGIAY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V    D        +PV       + FR++AY  +LL   
Sbjct: 153 RRQGKVNWCTGCQTVIANEQV---VDDNRCERCGSPVVEKIHPEWAFRITAYAQQLLDGL 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   +            G
Sbjct: 210 DGLKDWPDRVTTMQRNWIGKSEG 232



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 111/342 (32%), Gaps = 48/342 (14%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI------SFVKSGLKDLSLSRKT 213
                + F    Y    +         ++P+  ++  +          +G   L+     
Sbjct: 423 WHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVASF 482

Query: 214 FDWGIKIPDDP----QYIMYVWIDALTNYLTTTGYLDNPDGSK----AKFWPADLHVIGK 265
            +        P       M  ++D+   Y       D+          ++ P D++V G 
Sbjct: 483 VNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPRDDARPFDPEVARRWLPVDVYVGGP 542

Query: 266 DILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y+  +            + P+ + V         G K+SK  GNV+ P  ++
Sbjct: 543 EHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGGMV 602

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YD 374
              G D +R F++      KD  +  + +         +G+   ++R   +       +D
Sbjct: 603 SRFGADTVRMFMLFAAPPEKDIDWSDEQV---------DGLFRFLARVWRIYFARQACFD 653

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKP 433
                          +     R ++ + E ++     + ++A ++ LV+ +  +    +P
Sbjct: 654 ASEAALAQAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAF----EP 709

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                + PDRA+    +                P +A +++ 
Sbjct: 710 ----ASEPDRAAVREALLALATLLAPFA-----PHVAEELWH 742


>gi|258507843|ref|YP_003170594.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257147770|emb|CAR86743.1| Leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649171|dbj|BAI41333.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 803

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   + F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPRTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY DKLL+ 
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVVRKPMRQWMLKITAYADKLLAD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 205 LDDLDWPESIKQMQRNWI 222



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 113/343 (32%), Gaps = 56/343 (16%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                     LP E   +     +S L +L+
Sbjct: 410 YKLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLTLPEEVDIKPSGTGESPLANLT 469

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFW-PADLHVI 263
                 D   +        M  W    + Y        N     D  K K W P DL++ 
Sbjct: 470 DWVNVVDKNGRKGKRETNTMPQWA-GSSWYFLRFVDPHNKEALADYDKLKQWMPVDLYIG 528

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           G +    H +Y   +         +    P  +       +    EK+SKS GNV++P +
Sbjct: 529 GAEHAVLHLLYARFWNLFLYDIGAIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDD 588

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V++E G D LR + +          +  DGL          G    + R  S  + D   
Sbjct: 589 VVDEYGADTLRLYEMFMGPLDAGIAWSTDGL---------AGARKFLDRVWSAFIDDEGK 639

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
           +       T +D  +  V +  ++++ E+ +    + A+AQ++  ++             
Sbjct: 640 LRDRIT--TINDGRLDKVYNETVKKVTEDYEALHFNTAIAQMMVFINSA----------- 686

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +K +         + +E +     +L    P L  +I+  L 
Sbjct: 687 -RKDDD--------LPLEYVEGFVKMLAPIAPHLMEEIWQRLG 720


>gi|239978961|ref|ZP_04701485.1| isoleucyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291450841|ref|ZP_06590231.1| isoleucyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353790|gb|EFE80692.1| isoleucyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 1047

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/402 (13%), Positives = 134/402 (33%), Gaps = 13/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +        G++ +   N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLEENERTNWFPDSVKHGRFGDWLDNNVDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         ++  L+   S  E           +   +  + +++ +    +  
Sbjct: 455 SRNRYWGTPLPIWRCEEAHLTCVGSLAELSELTGIDQSELDPHRPYIDEITFTCTHPNCQ 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY         + +PA       D     F+ +  
Sbjct: 515 LEAYRVPE-VIDAWYDSGSMPFAQWGYPHRNKELFEQRYPAQFISEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++      +      P     +  D  +L  
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTAGWAPSAADPAPADRSVLDRWLLGE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + +++ + E + +    RA   + + V ++  ++  +      + +     T      +
Sbjct: 694 LNTLVEGVTEALDSYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDAAALRT----LHD 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+   VP +  +++  L V       +S+     P
Sbjct: 750 VVDTVTRLMAPLVPFITERVWQDLVVPVTPDAPESVHLAAWP 791



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGFHVGRKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFNGKKDIEAYGIAAFNAKCRESVTRHTDAFAELTTRMGYWVDMDDAYRTMDSSY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             +     K+I +K  + +      +  R     +D E+ +G +
Sbjct: 160 VQSVWWSLKQIFEKELLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|170755878|ref|YP_001779813.1| leucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121090|gb|ACA44926.1| leucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 813

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 91/275 (33%), Gaps = 29/275 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ I E++     + ++A+++   + + +Y              D      +   E I  
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYL-----------GSDTLRNASF-LRESIID 709

Query: 458 LAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
              LL  F P  A + ++++ +     N  +   D
Sbjct: 710 FITLLAPFAPHFAEEQWELIGINSSIFNEKWPEFD 744


>gi|227544867|ref|ZP_03974916.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300909913|ref|ZP_07127373.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185141|gb|EEI65212.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892561|gb|EFK85921.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 950

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 23/279 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 538 FTKETDIMDVWFDSGSSHQGVLAER------DYLTYPADLYLEGSDQYRGWFNSSLITSV 591

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + S + P  + V     +  +G K+SKS GNVIDP +V++++G + +R +++       D
Sbjct: 592 VCSGHAPYKEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVMSADTSA-D 650

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                   ++   A         +  +   +L +     P             D+ +L  
Sbjct: 651 VRVSMGTFQQISEA------YRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVK 704

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +  L+ +RE+  N     A   +I+ V       Y +  K    ++  N +   ++  V
Sbjct: 705 LNHFLKTMREDFDNYDFLDAYKALINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTV 764

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +++  L  LL   +P    +++  +   ++      +
Sbjct: 765 FYDILLTLVKLLTPILPHTTEEVWSYMNEPEDFVQLTEI 803



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 64  EGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQ 123

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +G   K             +  +     R     L +S  +D    T +K       
Sbjct: 124 LTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQI 183

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ + + KG +Y+     ++S   E+   + EV   
Sbjct: 184 RVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 220


>gi|91789693|ref|YP_550645.1| isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698918|gb|ABE45747.1| Isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 943

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 78/478 (16%), Positives = 148/478 (30%), Gaps = 36/478 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
             G   +  ++A             +    R    + D  DI  SY    R      +  
Sbjct: 366 VQGNGRYVDELALFGGLNIWKAAPLIIDKLREHGRLFDTHDIVHSYPHCWRHKTPVIYRA 425

Query: 106 C-RILWKKISDKGDIYKGCYSGWYSL------RDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
             +   +     G   K                + ++Y ++   +  D            
Sbjct: 426 AAQWFVRMDEGVGVFTKDKAGKTLRQLALAAIEETSFYPENGKTRLRDMIAGRPDW---C 482

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
              +  +   L  +                              G++  S +      G 
Sbjct: 483 ISRQRNWGVPLPFFIHTATGELHPRTM----EIMDQAARMVEAGGIEAWSKASAETIIGA 538

Query: 219 --KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
                     I+ VW D+ T +     +      +    WPADL++ G D     FH+  
Sbjct: 539 DAPDYIKSTDILDVWFDSGTTHDHVLRHSHAAQST----WPADLYLEGHDQHRGWFHSSL 594

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  +  + P    +     +  KG K+SKS GNV+ P EV +++G + +R +      
Sbjct: 595 LTACAMYDHAPYKGLLTHGFTVDGKGRKMSKSEGNVVVPQEVSDKLGAEIIRLWCASTDY 654

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILS 392
            G  G    D +  RV  D    I N + R +   + D+D            E D   LS
Sbjct: 655 SGDLGI--DDKILARV-VDAYRRIRNTL-RFLMANVSDFDPAKDAVPFDQMLEIDRYALS 710

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVL 448
             +++  +I  + +    H  ++++    SE     Y D  K   L  T P   +  +  
Sbjct: 711 RAAQLQADILAHYEVYEFHPVVSKLQIYCSEDLGSFYLDILKD-RLYTTGPKSLARRSAQ 769

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
               ++   +   +  F+   A + +     + E+   ++  +   P   L   +  I
Sbjct: 770 TALHQITHAMLRWMAPFLSFTAEEAWKTFG-SSESIFMETYAELTAPDEALLAKWSRI 826



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 12/151 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  +     Y N + HIGHA   ++ D++ +  +L GLD ++  G D HG  I  A + 
Sbjct: 53  PKFVLHDGPPYANGKIHIGHAVNKVLKDMIVKARQLKGLDAIYVPGWDCHGLPIENAIEK 112

Query: 65  AG----------VTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKK 112
                         ++ F  +           L +   +D+  RT +  +        K+
Sbjct: 113 LHGRNLPRDEVQAKSRAFATEQIAGQMADFKRLGVLGEWDNPYRTMDHANEANEIRALKR 172

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           I ++G +Y+G    ++     +   + E+  
Sbjct: 173 IMERGFVYRGLKPVYWCFDCGSSLAEFEIEY 203


>gi|226356086|ref|YP_002785826.1| isoleucyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318076|gb|ACO46072.1| putative isoleucine--tRNA ligase (isoleucyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 1066

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/419 (14%), Positives = 123/419 (29%), Gaps = 65/419 (15%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
               E        +      P+ +   E ++   +  +D+L+    +      P   R  
Sbjct: 392 LMWKEKNFLHSYPHCWRCGTPLMYYATESWYLNNTRLKDRLIEL--NGTIDWHPAHIRTG 449

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIP-------------------------------DDP 224
                   L D ++SR    WG  +P                                DP
Sbjct: 450 RYGGWLENLIDWNISRSR-YWGTPLPVWEAEDGEYRVIGSYAELAELSGRPEVTGESFDP 508

Query: 225 Q--------------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF-WPADLHVI 263
                                Y+M VW D+ +       Y         +  +PAD    
Sbjct: 509 HRPYVDDITFEADGKTFRRVPYVMDVWYDSGSMPFAQHHYPFENKELFEQGGFPADYISE 568

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
             D     F++++    ++  ++     + +  F+  KG+K+SKS GN++DP EV    G
Sbjct: 569 AIDQTRGWFNSLHQIGTMVFDSVAYKSVICAGHFLDEKGQKMSKSKGNILDPWEVFNTYG 628

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTP 380
            DA R++               + + +   +             +   L   D    P  
Sbjct: 629 ADAARWYTYVSAPPELSRRVGLNVIGESFRSYFMTLWNTYSFFVLYANLDQPDLRAAPPV 688

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF--DAQKPWEL 436
               E D  +++    ++  +   + N     +   +   V     + Y   + ++ W  
Sbjct: 689 EERPEVDRWLIAKVQALVGTVTGALNNYDPTGSSRALQDFVVEDLSNWYVRRNRRRFWS- 747

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
              +     +        +  +  L   F P LA  ++  L  +      +S+     P
Sbjct: 748 --GDGQVDLSAYATLHYALVTVTQLTAPFTPFLAESLYQNLVRSVTPDAPESVHLATWP 804



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 19/179 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +          N  P I H     + D+  RF  + G  V    G D HG  +  A 
Sbjct: 45  DGPRFTFYEGPPTANGMPGIHHVEARSLKDLFPRFKTMQGYFVGRKAGWDTHGLPVEIAV 104

Query: 63  QNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHH 103
           +                       +  V +    +R   + +   +  D    T ++ + 
Sbjct: 105 EKKLGLNSKREVEAYGIDKFNEQCRETVFEYEHEWRRFTERMAYWVDLDRPYMTLQRNYI 164

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           ++     +++  KG +YKG     Y  +D    ++ EV +G       + + P +  + 
Sbjct: 165 ESIWWSVQQLDQKGLLYKGFRVAPYCPKDGTTLSNAEVSEGYKDIQDPSVYVPFRLTDP 223


>gi|261492878|ref|ZP_05989424.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496772|ref|ZP_05993147.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307611|gb|EEY08939.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311419|gb|EEY12576.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 938

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 79/489 (16%), Positives = 149/489 (30%), Gaps = 59/489 (12%)

Query: 34  LARF-HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           L RF H      V F  G              A            +   +M     IS D
Sbjct: 305 LLRFNHPFYDYSVPFIFGDHVTTDGGTGLVHTAPDHGADDFVVARKYNIEM--AGLISND 362

Query: 93  DFIRTTEKRH-----HDTCRILWKKISDKGD-----IYKGCYSGWYSLRDEA-YYNDDEV 141
              +            ++   + +K+ + G        K  Y   +  +    +    + 
Sbjct: 363 GKFKADTPFFAGLGVFESNDKVVEKLQEVGALLKLSRIKHSYPHCWRHKTPIIFRATPQW 422

Query: 142 YKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNE 195
           + G + Q    Q       V+W+   G     +   ++          + +P+     NE
Sbjct: 423 FIGMETQGLRQQALGEIKSVRWIPSWGEARIDTMVANRPDWCISRQRTWGVPMAMFVHNE 482

Query: 196 VISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ----------------YIMYVWIDALTNY 238
                   L+ +    K  +  GI+   D                    + VW D+ + Y
Sbjct: 483 TEELHPRTLELIEEVAKRVEEKGIQAWWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTY 542

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            +        +G+      AD+++ G D     F +    +   +   P  + +     +
Sbjct: 543 ASVVEQRPEFNGNL-----ADMYLEGSDQHRGWFMSSLMLSTATNGKAPYKQVLTHGFTV 597

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             KG K+SKSLGNVI P EV  + G D LR ++           Y  +        + A 
Sbjct: 598 DEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS-------TDYTGEITVSHNILNSAG 650

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                +  +   +L + +G  P      P      D   ++       +I+E   N   H
Sbjct: 651 ESYRRIRNTARFLLANLNGFDPKSDLVQPQEMIALDRWAVACALEAQNDIKEAYDNYQFH 710

Query: 412 RALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + +++   S      Y D  K  +   K +     +       +   L   +   +  
Sbjct: 711 TVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPILSF 770

Query: 469 LANKIFDIL 477
            A++I+  L
Sbjct: 771 TADEIWGYL 779



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 66/226 (29%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLPIELK 106

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 107 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFNTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            + N V     E  
Sbjct: 167 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAVDVNAVEEK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      +  L +   +   + +P  R   +   +   L  L   R
Sbjct: 227 FNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDER 272


>gi|195441879|ref|XP_002068689.1| GK17911 [Drosophila willistoni]
 gi|194164774|gb|EDW79675.1| GK17911 [Drosophila willistoni]
          Length = 1047

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 115/383 (30%), Gaps = 47/383 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V +     +Y+       W      ++        +     S  +     E    V    
Sbjct: 491 VPEHHTKTWYHWMDGIRDWCVSRQLWWGHRIPAYHVSFNDPSIKKETSDDEEFWVVARTQ 550

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +  L   +         I +  D   ++  W  +     +  G+ D        F+P  L
Sbjct: 551 EEALAKAAQRFGVDASKIVLKQDED-VLDTWFSSGLFPFSVFGWPDQTK-DLQTFYPTSL 608

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI- 317
              G DIL F    + +    L   LP  +           G K+SKSLGNVIDP++VI 
Sbjct: 609 LETGHDILFFWVARMVFFGQKLLGKLPFREVYLHPMVRDAHGRKMSKSLGNVIDPMDVIK 668

Query: 318 ------------------------------------EEVGVDALRYFLVREIACGKDGFY 341
                                                E G DALR+ L   I   +D   
Sbjct: 669 GITLEGLHAQLIGSNLDPREIEKAKAGQKQDYPQGIPECGSDALRFALCAYITQARDINL 728

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDESILSVCSRVLQE 400
           D + +         N + N    ++     +       +  +  + D  ILS  +  ++ 
Sbjct: 729 DINRVLG--YRFFCNKLWNATKFALLYFTGNEKFSTNLSADSVNQMDAWILSRLAATIET 786

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
                +      A +   S       D Y +  KP   +    ++ +         +   
Sbjct: 787 CNVGFETYDFAAATSACYSFWLYDLCDVYLECLKP-VFQSGTAEQQTAARRTLYVCLDYG 845

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             LL  F+P +  +++  L  A+
Sbjct: 846 LRLLSPFMPFITEELYQRLPRAE 868



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           K  +           H+GHA    I D + R+HR+ G   L+  G D  G       +  
Sbjct: 128 KFIMIIPPPNVTGSLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKL 187

Query: 66  GVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                  +  +      D    L  SYD      T + +   T 
Sbjct: 188 LWRDEKLSRHDLGREKFIERIWDWRREKGGRIYDQLKSLGSSYDWSRVAFTMDPKLCRTV 247

Query: 107 RILWKKISDKGDIYKGCYSGWYSL 130
              + ++ + G IY+      +S 
Sbjct: 248 TEAFVRLHEDGAIYRSSRLVNWSC 271


>gi|47093189|ref|ZP_00230963.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018440|gb|EAL09199.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 921

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 79/474 (16%), Positives = 152/474 (32%), Gaps = 41/474 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAG---VTTKVFVDQNSRNFRDMADVLDI--SY 91
           F      D+      D+HG    +A    G    T    V +       +  +  I  SY
Sbjct: 333 FLIGKKYDLEVLAPLDDHGVFTEEAPGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSY 392

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG---WYSLRDEAYYNDDEVYKGADGQ 148
               RT +          +  I    D       G     +  +   +N           
Sbjct: 393 PHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVIS 452

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
              A   P+     E     ++      +S         +  ER  + +           
Sbjct: 453 RQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTHPGSP 512

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
               T             IM VW D+ +++                  PADL++ G D  
Sbjct: 513 NGEFT---------KETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQY 557

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F++    A  ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R
Sbjct: 558 RGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVR 617

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---- 382
            ++        D     + LK+       + +   +  ++  +L + +   PT  A    
Sbjct: 618 LWVASVDYQA-DVRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNAVSYE 670

Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK- 438
              E D+ +L   + +++ +++N +         Q+ +   V     Y D  K     + 
Sbjct: 671 NLREVDKYMLIKLNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEA 730

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
            +      +  V  E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 731 ADSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPE 784



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 15/154 (9%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K YI      Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A  
Sbjct: 47  RKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIA 106

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
             GV  K             +        R     L I+ D      T    +      +
Sbjct: 107 KKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKV 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +++ KG IYKG    ++S   E+   + E+  
Sbjct: 167 FGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|319897524|ref|YP_004135721.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433030|emb|CBY81401.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 924

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 74/448 (16%), Positives = 149/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 335 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 394

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 395 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 454

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L+ L    K     GI+   D                    
Sbjct: 455 GVPMTLFVHKETEELHPRTLELLEEVAKRVERAGIQAWWDLDEKELLGADAETYRKVPDT 514

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 515 LDVWFDSGSTYSSVVANRPEFNGQNI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 569

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV++E G D LR ++      G+    D+  
Sbjct: 570 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDEFGGDILRLWVASTDYTGEMTVSDE-- 627

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 628 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 682

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 683 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKNRQYTTKADSLARRSCQTALWHIAEA 742

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 743 LVRWMAPILSFTADEIWQHLPQTESARA 770



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  KGKKSFILHDGPPYANGSIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 89

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 90  VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 150 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVCFPAESADEIEAK 209

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 210 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 255


>gi|193216846|ref|YP_002000088.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002169|gb|ACF07384.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 889

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/296 (20%), Positives = 112/296 (37%), Gaps = 23/296 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     Q IM VW D+ +  ++                P DL+  G D     F++    
Sbjct: 513 KGFVKEQDIMDVWFDSGSTSISVKPGNVEA--------PFDLYFEGSDQYRGWFNSSLIN 564

Query: 277 AFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           + +     P  K + SHGF+L  KG K+SKS GNVIDP+++  + G D LR ++      
Sbjct: 565 SVIWRNKAPF-KALLSHGFLLDGKGNKMSKSKGNVIDPLDITNKYGADILRLWVANSEY- 622

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
             D   D   L++  N ++     N    ++  IL        +    +   E + +   
Sbjct: 623 TNDISIDDKILQQ--NIEIYRKFRN----TMKFILGSISDYDWSEVKLSSIHELMFNRLQ 676

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV-SEVDRYFDAQKP-WELKKTNPDRASTVLYVTVE 453
            +  +I E  ++      +  + + V +    Y    K    L K N      V +V   
Sbjct: 677 NLTNKIIEAYEDYRFVAVIKLINNFVINLSSYYLSIVKDILYLNKQNDSERRQVQFVLAS 736

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCF--QSLDQRLKPGFMLHKTFDPIF 507
           + + L I     +P    +I+  L + ++      +   +   P   L + ++  F
Sbjct: 737 IAKVLTIAFAPIMPSTCEEIYSYLNIPNKLSSIHEEEFPKLSTPNEKLEEKWEEFF 792



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   +     Y N   H+GHA   II D++ RF  + G    +  G D HG  I   
Sbjct: 49  KSNKPFILHDGPPYANGNIHLGHALNKIIKDIIVRFRTMQGFFSPYVAGWDTHGLPIEHK 108

Query: 62  -------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                  +        ++    L +   + D   T +K      
Sbjct: 109 MLSEAKKAAKDYSIVELRKAAHQYALSQIELQKEQFKKLAVLTDFQDIYVTLDKELEAKQ 168

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             L+KK    G IYK     ++S   ++   + EV  
Sbjct: 169 LELFKKEILSGLIYKDLKPVYWSPSSQSALAEAEVEY 205


>gi|125532574|gb|EAY79139.1| hypothetical protein OsI_34246 [Oryza sativa Indica Group]
          Length = 1048

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 137/419 (32%), Gaps = 87/419 (20%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +   + V+ M +  +F   S      L   ++    I+PI+   +   +++  ++D  
Sbjct: 449 RCSRTKDIVEPMMKPQWFVDCSTMAKAALDAVKTKRIEIIPIQYEQDWYRWLE-NIRDWC 507

Query: 209 LSRKTFD------WGIKIPDDPQY------------------------------------ 226
           +SR+ +       W + + DD +                                     
Sbjct: 508 ISRQLWWGHRIPAWYVTLEDDEEKDIGSYIDHWIIARNESDAILEAKQRYPGKNYKLDQD 567

Query: 227 --IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +    L+  G+ D+     + F+P  +   G DIL F    +     LL  
Sbjct: 568 PDVLDTWFSSGLFPLSVLGWPDSTA-DLSSFYPTSVLETGLDILFFWVARMVMMGMLLGG 626

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++P  K           G K++K LGNVIDPI+VI  + ++ L   L        +    
Sbjct: 627 DVPFQKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLDPSELEKA 686

Query: 343 KDGLKK--------------------------RVNADL-----ANGIGNLVSRSVSMILK 371
           K+G KK                          ++N D+          N +  +V   + 
Sbjct: 687 KEGQKKDFPNGIPECGTDALRFALISYTSQSDKINLDIKRVHGYRQWCNKLWNAVRFAMN 746

Query: 372 DYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
                   P A          + ILS  ++ + +   +M+      A + + S       
Sbjct: 747 KLGDQYTPPAAIALCSMPPLCKWILSALNKAVGKTVSSMEACKFSEATSSMYSWWQYQLC 806

Query: 425 DRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D + +A KP+  +    +             +     LL  F+P +  +++  L    E
Sbjct: 807 DVFIEAVKPYFNQSQELESERGACRDTLWICLDTGLRLLHPFMPYITEELWQRLPQPKE 865



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 48/162 (29%), Gaps = 19/162 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G   L+  G D  G      
Sbjct: 119 SSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWRRMSGYSALWVPGMDHAGIATQVV 178

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + DQ+          L  S D      T +++ 
Sbjct: 179 VEKRLMRDRNLSRHDLGRDKFLLEVLQWKDQHGGTILKQLRTLGASLDWSRECFTMDEKR 238

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                  + ++  +G IY+      +        +D EV   
Sbjct: 239 SKAVTEAFIRLHKEGLIYRDNRIVNWDCSLRTAISDIEVDYC 280


>gi|76789024|ref|YP_328110.1| valyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|123744918|sp|Q3KM60|SYV_CHLTA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76167554|gb|AAX50562.1| valyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 939

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYHLFEEYKN--FINKLWNGARFIFGHISELTSRDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K + D+       +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQDSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|322693319|gb|EFY85183.1| isoleucyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 1089

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/443 (15%), Positives = 144/443 (32%), Gaps = 32/443 (7%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRHHDTC 106
           D+ G    K    AG+  K       ++ +    ++  S     Y    R+     +   
Sbjct: 367 DDTGHFTEKVPDFAGMHVKKADKHIIKHLKATDRLVVESQLRHSYPMCPRSDTPLIYRAV 426

Query: 107 RILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              +    + I D     +G +     +++  + +     +  +         P+     
Sbjct: 427 PSWFIRIPEVIPDMLKNIEGSHWVPSFVKERRFASWIANARDWNVGRNRYWGTPIPLWVS 486

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           +    R+     + L     +   +  + R       + S +   +L R           
Sbjct: 487 DDLEERVCIGSIEELRELSGYQGELTDLHRDKVDHITIPSKMGKGTLRRV---------- 536

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +    +  Y         K +P D    G D     F+ +      L
Sbjct: 537 --DEVFDCWFESGSMPYASQHYPFENAEKFQKSFPGDFIAEGLDQTRGWFYTLLVLGTHL 594

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    V +   +   G+K+SK L N  DP  V+++ G DALR +L+       +  
Sbjct: 595 FGCSPFQNCVVNGIVLAEDGKKMSKRLKNYPDPSIVMDKYGSDALRLYLINSPVVRAEPL 654

Query: 340 FYDKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTES---DESILS 392
            + + G+K+ V   L     +        ++    +  D M             D  IL+
Sbjct: 655 RFKESGVKEVVQKVLLPLWNSFKFFEGQIALLKKAEGVDYMWNPDMESENENVMDRWILA 714

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVT 451
            C  +L+ + E M+   ++  + +++ L+    + Y    +     +         L   
Sbjct: 715 SCQSLLEFVNEEMRGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGENGLQDTQHALNAL 774

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+  L   L  F P L++ I+
Sbjct: 775 FEVLYTLCRGLAPFTPFLSDTIY 797



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 51/164 (31%), Gaps = 37/164 (22%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  SGRPHYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGLPIEHE 89

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFR----DMADVLDISYDDFIR---- 96
                             +      +  V + +  +R     +   +D   D  +R    
Sbjct: 90  IDKKLGISGKAAVTKFGIEKYNEECRAIVMRYASEWRLTIERLGRWIDFDNDYKVRNTNW 149

Query: 97  ------------TTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
                       T + +  ++   ++K++ +KG +Y+G     Y
Sbjct: 150 FSDVAHANPCHKTMDPKFMESLWWVFKQLFEKGQVYQGHRVMPY 193


>gi|298712913|emb|CBJ33425.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1060

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 135/404 (33%), Gaps = 51/404 (12%)

Query: 120 YKGCYSGWYSLRD-EAYYNDDEVYKGADGQYYNAQ--HNPVQWMEEEGYFFRLSAYQDKL 176
           Y+  Y   +  +    +   D+ +   D     A      VQW+ E G     +  + + 
Sbjct: 480 YQHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALSAIEKVQWIPEVGQRRITTMVEGRN 539

Query: 177 LSYYESHPEFILPIE-RRNEVISFVKSGLKDLSLSRKTF-------DWGIKI-------- 220
                    + LPI    N          + +   R           W +++        
Sbjct: 540 DWCISRQRSWGLPIPVFYNIESGEPMLTTESIEHIRAIVAEHGSDAWWEMEVADLLPPSL 599

Query: 221 ------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        M VW D+ ++      +       +   +PADL++ G D     F +
Sbjct: 600 QGEADQWRRGTDTMDVWFDSGSS------WAGVAKAREELDYPADLYLEGSDQHRGWFQS 653

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVD 323
               +   + + P    +     +  KG K+SKSLGN +DP EV             G D
Sbjct: 654 SLLTSVAANGHAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPTEVIEGGNNKKQKPAYGAD 713

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PG 381
            LR ++   +    D       +K+   ++    + N + R ++  L D+D    +    
Sbjct: 714 VLRLWV-SSVDYSGDVCVGDQIIKQA--SESYRKLRNTL-RYLTGSLFDFDPEKDSVPYE 769

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT 439
                D+ +L + S VL+E+         ++A   +         + Y D  K      +
Sbjct: 770 DLPSLDKYMLGMLSSVLEEVENAFDGYQFYKASQVLQRFATADLSNFYLDGAKDRLYISS 829

Query: 440 NPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           + D R  +   V   ++  L+  +   +P +A  ++  L    E
Sbjct: 830 SDDFRRRSCQTVLHTMLMSLSTAMAPILPHMAEDVWQTLPFKPE 873



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           EK  +     Y N   HIGHA   I+ D + R+  L G  V +  G D HG  I      
Sbjct: 122 EKYVLHDGPPYANGDLHIGHALNKILKDFINRYQMLRGRKVGYVPGWDCHGLPIELKVLQ 181

Query: 60  --KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
             K+ +  G+T          F                +   ++    T +  +      
Sbjct: 182 SMKSNERRGMTPVQLRKKAAEFARNTVSKQSASFRRYGVWGDFEKPYLTLQPEYEAAQIE 241

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ K+  +G I++G     +S        + E+  
Sbjct: 242 VFGKMFTEGHIFRGRKPVNWSPSSRTALAEAELEY 276


>gi|199599096|ref|ZP_03212501.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229551697|ref|ZP_04440422.1| leucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539090|ref|YP_003173589.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|199589989|gb|EDY98090.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229314946|gb|EEN80919.1| leucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257150766|emb|CAR89738.1| Leucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 803

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++   Y      YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    + 
Sbjct: 29  KKPNYYALDMFPYPSGQGLHVGHPEGYTATDIVARMKRMQGFNVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G   + F  QN   F+   + L  SYD    I TT+  ++   + +++++   G  
Sbjct: 89  ALNTGHNPRTFTKQNIETFKRQINSLGFSYDWNREINTTDPNYYKWTQWIFEQLYKHGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY DKLL+ 
Sbjct: 149 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVVRKPMRQWMLKITAYADKLLAD 204

Query: 180 YESHPEFILPIERRNEVI 197
            +         + +   I
Sbjct: 205 LDDLDWPESIKQMQRNWI 222



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 67/412 (16%), Positives = 132/412 (32%), Gaps = 63/412 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            + R +   +      K + + G+I +  Y+G     +  + +        D      + 
Sbjct: 341 HDDRDYAFAKKFGIEIKPVIEGGNIDEAAYTGDGVHINSGFLDGLNEQDAIDRMIAWLED 400

Query: 155 N----PVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
                     +   + F    Y  + +                     LP E   +    
Sbjct: 401 KGIGQEKVNYKLRDWVFSRQRYWGEPIPVIHWEDGETTLVPEDELPLTLPEEVDIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF 255
            +S L +L+      D   +        M  W    + Y        N     D  K K 
Sbjct: 461 GESPLANLTDWVNVVDKNGRKGKRETNTMPQWA-GSSWYFLRFVDPHNKEALADYDKLKQ 519

Query: 256 W-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKS 306
           W P DL++ G +    H +Y   +         +    P  +       +    EK+SKS
Sbjct: 520 WMPVDLYIGGAEHAVLHLLYARFWNLFLYDIGAIPNKEPFQRLFNQGMILGDNHEKMSKS 579

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNV++P +V++E G D LR + +          +  DGL          G    + R  
Sbjct: 580 KGNVVNPDDVVDEYGADTLRLYEMFMGPLDAGIAWSTDGL---------AGARKFLDRVW 630

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           S  + D   +       T +D  +  V +  ++++ E+ +    + A+AQ++  ++    
Sbjct: 631 SAFIDDEGKLRDRIT--TINDGRLDKVYNETVKKVTEDYEALHFNTAIAQMMVFINSA-- 686

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +K +         + +E +     +L    P L  +I+  L 
Sbjct: 687 ----------RKDDD--------LPLEYVEGFVKMLAPIAPHLMEEIWQRLG 720


>gi|116670947|ref|YP_831880.1| valyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611056|gb|ABK03780.1| valyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 873

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 8/252 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W  +        G+  + D   AK +P D+     DI+R         A  L    
Sbjct: 518 VLDTWATSSLTPQIVGGWSTDED-LFAKVYPFDVRPQAHDIIRTWLFSTAVRADALQNTA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNVI P +V+ E G DA+RY+       G D  Y  +
Sbjct: 577 PWKHAAISGWILDPDRKKMSKSKGNVIVPTDVLNEYGSDAVRYW-AASAKLGADTAY--E 633

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRE 403
             + ++   LA  + N     +++   +   +       T   D ++L+  S V+ +  +
Sbjct: 634 IAQMKIGRRLAIKLLNASKFVLNLGATENSVVSADLSVLTNPLDRAVLAQLSDVVAQATK 693

Query: 404 NMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
              N    RAL    S      D Y +  K            ++VL      +  L  L 
Sbjct: 694 AFGNYDYARALQISESFFWQFTDDYVELIKDRAYGAAGEAEQASVLAALATTLDTLLRLF 753

Query: 463 QAFVPKLANKIF 474
             F+P    +++
Sbjct: 754 APFLPFATEEVW 765



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 38/161 (23%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I T     +   H+GH +     DVLAR+ R+ G +V +  G D++G    +  QN  
Sbjct: 53  YSIDTPPPTASGSLHVGHMFSYTQTDVLARYQRMTGKNVFYPMGWDDNGLPTERRVQNYY 112

Query: 66  --GVTT---------------------------------KVFVDQNSRNFRDMADVLDIS 90
                                                  +    ++ + F ++   L +S
Sbjct: 113 GVRCDPAIHYDADYRPPAEPAKNQRDFDVISRRNFIELCEELAVEDEKVFENLFQTLGLS 172

Query: 91  --YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
             +D   RT + +     +  +      GD Y       + 
Sbjct: 173 VDWDLTYRTIDDKSRAISQRAFLANLAAGDAYMAEAPTLWD 213


>gi|332181169|gb|AEE16857.1| leucyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 887

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ Y+     YP+AQ  H+GH       D+  R+ R++G +VL   G D  G      A 
Sbjct: 35  KRTYVLDMFPYPSAQGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGYDAFGLPAENYAI 94

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G       + N  +F      L  SY  D  + T    ++   + ++ ++  KG  Y+
Sbjct: 95  KTGTHPAATTNANIEHFTQQIKALGFSYDWDRCVSTCTPDYYHWTQWIFLQLYKKGLAYE 154

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         ++EV +G      +     V       +  R++AY D+LL   +
Sbjct: 155 AETPINWCPSCLTGLANEEVKEG----RCDRCGAAVSRKTIRQWILRITAYADRLLEDLD 210

Query: 182 SHPEFILPIERRNEVISFVK 201
           S          +   I   +
Sbjct: 211 SLDWPESVKLMQKNWIGKSE 230



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 117/377 (31%), Gaps = 88/377 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P++ ++  +          + + ++   GI 
Sbjct: 458 YKLRDWVFSRQRYWGEPMPLVHCQKCGCVPLDEKDLPLLLPDVKTYQPTGTGESPLAGID 517

Query: 220 IPDD------------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVI 263
              +                M  W  +   YL         +       K+W P DL+V 
Sbjct: 518 EWVNCTCPKCGGKAKRETNTMPQWAGSCWYYLRYLDPHNTKEFASQDAVKYWMPVDLYVG 577

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFI------------------- 296
           G +    H +Y   +         +    P  + V                         
Sbjct: 578 GAEHAVLHLLYARFWHKVLYDLGLVQTKEPFQRLVNQGMITSFAFQRKNKTLVATDAVTE 637

Query: 297 LHKG---------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              G                K+SKSL NV++P +VI+E G D++R + +          +
Sbjct: 638 TESGVFVETATGEKLERVIAKMSKSLKNVVNPDDVIKEYGADSVRMYEMFMGPLEVSKPW 697

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  GL          GI   + +  ++  K     IP  G   +   ++     + ++++
Sbjct: 698 NTQGLI---------GINRFLEKIWAVSEKSI-VDIPVDGELDKEFTALRKTFHKTVKKV 747

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+      + A++Q++  ++E                    A+ +  +   +      L
Sbjct: 748 TEDTAALNFNTAISQMMIFINE--------------------AAKIESLPRAIWSDFVKL 787

Query: 462 LQAFVPKLANKIFDILF 478
           L  + P +  ++++ L 
Sbjct: 788 LSVYAPHIGEELWEKLG 804


>gi|297199056|ref|ZP_06916453.1| isoleucyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|297147275|gb|EDY60025.2| isoleucyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 1064

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/387 (13%), Positives = 118/387 (30%), Gaps = 15/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G++ +   N + W  
Sbjct: 440 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLQENENTNWFPETVKHGRFGDWLQNNIDWAL 499

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    + H   +       E+     S L           +     
Sbjct: 500 SRNRYWGTP---LPIWRCEDDHLTVVGSRAELTELTGTDHSELDPHRPFIDDVTFACPQC 556

Query: 222 DDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 557 QKTATRVPEVIDAWYDSGSMPFAQWGYPYKNKELFESRYPAQFISEAIDQTRGWFYTLMA 616

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN ++PI +++  G DA+R+F+    + 
Sbjct: 617 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNTLEPIPLMDRHGADAVRWFMAAGGSP 676

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P      D  +LS 
Sbjct: 677 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSEADPAPADRPVLDRWLLSE 736

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++ +++++    RA   + + V ++  ++  +      + +     T      E
Sbjct: 737 LHALTDQVTQSLESYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 792

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V+  +  L+    P +  +++  L V 
Sbjct: 793 VVETVTQLMAPLTPFITERVWQDLVVP 819



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 85  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 144

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                       +  V +++  F  +   +    D  D  RT +  +
Sbjct: 145 VEKELGFSGKKDIEAYGIAEFNAKCRESVTRHTDAFEALTTRMGYWTDLQDPYRTMDPEY 204

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K I DKG + +      +  R     +D E+ +G +
Sbjct: 205 IESVWWSLKTIFDKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 248


>gi|308173505|ref|YP_003920210.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606369|emb|CBI42740.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553563|gb|AEB24055.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911644|gb|AEB63240.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 921

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 76/448 (16%), Positives = 145/448 (32%), Gaps = 30/448 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGV---TTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
               DE G    +A    G+        + +       +  +  I  SY    RT +   
Sbjct: 345 LCPVDEKGNMTDEAPGFEGMFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTI 404

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                  +  I D                 E             G +  ++         
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIQQT-KWVPEWGEQRLYNMVRDRGDWCISRQR---VWGV 460

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
               F     +  +      H   +      N         L     +      GI    
Sbjct: 461 PIPVFYAENGEPVITDETIEHVSELFKKHGSNVWFEREAKDLLPEGFTHPGSPNGI--FT 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
             Q IM VW D+ +++                  PADL++ G D     F++    A  +
Sbjct: 519 KEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRGWFNSSLSTAVAV 572

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +   G K+SKSLGN IDP ++ +++G + LR ++   +    D  
Sbjct: 573 TGQAPYKGVLSHGFTLDANGRKMSKSLGNTIDPTKIAKQLGAEILRLWV-SSVNYQADHP 631

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVL 398
             +D LK+   A++   + N   R +   L D+D  +         E D+ +L   ++++
Sbjct: 632 VSEDILKQV--AEVYRKVRNTF-RFLHGNLFDFDPSVNAVAVKDLREVDQYMLIKLNKLI 688

Query: 399 QEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTVEV 454
            ++++             + +   +     Y D  K     +   +PDR  ++  V  E 
Sbjct: 689 DKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDR-RSMQTVFYET 747

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADE 482
           +  L  L    +P  A++++  L   +E
Sbjct: 748 LLALVKLTAPILPHTADEMWSHLSFVEE 775



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  Q     R+    L +  D      T +       
Sbjct: 105 LTKNKKVNRKEMSVADFRKLCEEYAWQQIERQREQFKRLGVRGDWENPYVTLQPEFEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|302341853|ref|YP_003806382.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638466|gb|ADK83788.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 937

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/353 (18%), Positives = 117/353 (33%), Gaps = 20/353 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
             E   G      +   +  +        FR     + +L+   +            +  
Sbjct: 444 GRERIHGMIENRPDWCISRQRSWGVPITVFRCQGCGETVLTPEMAQKVVAAFEAEGADAW 503

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                      L+      G  +  D   I+ VW D+  +                  WP
Sbjct: 504 FTRSVAEILGELAVCPICGGHDLAKDND-ILDVWFDSGCSQAAVLEAHPQ------LTWP 556

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     FH+    A       P  + +     +   G K+SKSLGNVI P +
Sbjct: 557 ADMYLEGSDQHRGWFHSSLLCAMATRGAAPYRQVLTHGFVVDGDGRKMSKSLGNVIAPQK 616

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI++ G + LR ++  E     D     D LK+   A+    I N + R +   L D+D 
Sbjct: 617 VIDQYGAEILRLWVAAEDYTV-DIRLSNDILKQL--AEAYRRIRNTM-RFMLGNLHDFDP 672

Query: 376 MIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQ 431
                 P    + D  +L     ++  +R+  ++   H     +    +V     Y D  
Sbjct: 673 QAHAVAPDQMGQMDRLMLHRLQELIGRVRKGYEDFAFHACFHGLHNYCVVDLSGFYLDVL 732

Query: 432 KPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           K         +P R      V    +  +  L    +   A +++D L  A +
Sbjct: 733 KDRLYTCAPDDPAR-RAAQTVLYHTLSAMVRLAAPILSFTAEEVWDYLPGAKD 784



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+G A+  ++ D + +  ++ G D ++  G D HG  I    
Sbjct: 46  GRPKFILHDGPPYANGNIHMGTAFNKVLKDFIVKSRQMAGFDAVYVPGWDCHGLPIEYQV 105

Query: 63  QNAGVTTKVFVDQN---SRNFRDMADVLDISYDDFIRT----TEKRHHDTCRILWK---- 111
                       Q     R  +     +DI  D+F+R          + T +  ++    
Sbjct: 106 TKNLGDEACHKSQIDIRRRCRKYAEKYIDIQRDEFVRLGVLGDWPDPYLTMKYSYEAAIA 165

Query: 112 ----KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
               +I   G +Y+      + +       + EV   
Sbjct: 166 REFCRIYAGGGVYRSKKPVHWCMDCRTALAEAEVEYH 202


>gi|85057292|ref|YP_456208.1| valyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789397|gb|ABC65129.1| valyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 876

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 150/387 (38%), Gaps = 34/387 (8%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D +        +L+ + ++   E++    G Y +   + ++      +F +  A  
Sbjct: 319 YQGLDRFVCRQKLVQTLKKKGFFTKTEIHLYKVG-YSSISDSIIEPRLSLQWFLKTKAIA 377

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------ 221
              L   + +        R   + +     ++D  +SR+   WG +IP            
Sbjct: 378 QNALKTNKINFF----PLRFKNIFNNWLQNIEDWCISRQ-LWWGHQIPAWHKGKEIKVQI 432

Query: 222 --DDPQY-----IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHA-- 272
               P++     ++  W  +     +T G+ +         +P D+ V G DIL F    
Sbjct: 433 ESPGPEWNLDCDVLDTWFSSALWPFSTLGWPNCNTPLFQNHFPTDVLVTGYDILTFWVSK 492

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           + + + LL+   P    +       +KG+K+SKS GN +DP+EV+ + G DALR+FL   
Sbjct: 493 MVFQSILLTQKDPFKDVLLHGLVRDNKGKKMSKSKGNGVDPLEVVAKYGTDALRWFLTTN 552

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS 392
            A G D FYD+  +    N    N + N +SR + +     D         +   +++L+
Sbjct: 553 AAPGFDLFYDETKVASSWN--FINKLWN-ISRFIKLKTNTLDTDF-DINLLSLPQKALLT 608

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK-PWELKKTNPDRASTVLY 449
                 Q++    Q   +      +   V E   + + +  K   +   +N         
Sbjct: 609 QLHLTTQKVTTLYQKYELKEIGKILYHFVWEYFANWHLEFAKHDLDQNNSNLTNLYNSQK 668

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDI 476
             V +I+ +  LL  F+P + + +++ 
Sbjct: 669 FLVYMIKYILQLLHPFIPFVTDVLYEN 695



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 18/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +         + H+GHA+   I D++ RF ++ G DVLF  G D  G      
Sbjct: 30  TTKKTFTVVIPPPNVTGKLHLGHAWNNTIQDIIIRFKKMQGFDVLFLPGMDHAGIATQNK 89

Query: 62  AQNAGVTT----------------KVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHH 103
            +                        + +++++N R    VL +  D      T +    
Sbjct: 90  VKEQLKQEGLLNKTLNKEIFLKYAWQWKEKHAQNIRQQWQVLGLHLDYNFEKFTLDPDLS 149

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            T + ++ K+  +  IY+      +  + +   ++ EV   
Sbjct: 150 QTVQEVFIKLYQQKLIYRDYKIINWDPKTKTALSNVEVNYH 190


>gi|242774452|ref|XP_002478443.1| isoleucyl-tRNA synthetase ,cytoplasmic [Talaromyces stipitatus ATCC
           10500]
 gi|218722062|gb|EED21480.1| isoleucyl-tRNA synthetase ,cytoplasmic [Talaromyces stipitatus ATCC
           10500]
          Length = 1079

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y      +    +PA     G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASVHYPFERKDTFQDAFPAQFIAEGLDQTRGWFYTLSVLGCHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G+K+SK L N  DP  +++  G DALR +L+       +    K+
Sbjct: 581 PYQNVIVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMI-----LKDYDGMIPTPGAFTE---SDESILSVCSR 396
              K + + +   + N        +     +++ D         T     D  IL+ C  
Sbjct: 641 AGVKEIISKVLLPLWNSYKFFEGQVALLKKIENIDYCFDPKAEVTNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNQEMSAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGENGVDDTQHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F+P + + I+  L
Sbjct: 761 YTLVRGLAPFIPFITDTIYLRL 782



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+         +    PH GH     I D++ R+  + G       G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYFSMTGHYCERRFGWDTHGVPIEHE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   + L   I +D+  RT +   
Sbjct: 90  IDKKLGMSGSEAVEKLGIAKYNEECRAIVMRYASEWRQTIERLGRWIDFDNPYRTLDATF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K+++DK  +Y+
Sbjct: 150 MESVWWIFKQLADKDMVYR 168


>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229753|sp|A3PAV8|SYI_PROM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 968

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 76/420 (18%), Positives = 141/420 (33%), Gaps = 60/420 (14%)

Query: 120 YKGCYSGWYSLRD-EAYYNDDEVYKGADGQYYNAQHNP--VQWMEEEGYFFRLSAYQDKL 176
           YK  Y   +  +    +   ++ +   +G   +A      V+WM E G     S    + 
Sbjct: 420 YKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALKAIEDVEWMPETGKKRIYSMVVGRG 479

Query: 177 LSYYESHPEFILPIERR----------NEVISFVKSGLKDLSLSRKTFDWGIK------- 219
                    + +PI             N+ I      L     +   +DW +K       
Sbjct: 480 DWCISRQRSWGVPIPVFYKKNGNEILLNKEIINHIQELFSEHGADIWWDWDVKNLLPENY 539

Query: 220 -----IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                +    +  M VW D+ ++      +    +      +PADL++ G D     F +
Sbjct: 540 AKESDLWKKGKDTMDVWFDSGSS------WAAVCELRSELKYPADLYLEGSDQHRGWFQS 593

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE---------VGVD 323
               +  ++   P  K +     +   G K+SKSLGNV+DP  +I            G D
Sbjct: 594 SLLTSVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTDPAYGAD 653

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR ++           Y  D           + +   V  +   +L +     P   +F
Sbjct: 654 VLRLWVSS-------VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPKIDSF 706

Query: 384 T-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL 436
                   D+ +L     V  +I    +N    +    + S   V   + Y D  K    
Sbjct: 707 EIDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLY 766

Query: 437 KKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             +    R  +  +V  +V+  LA+L+   +  +A  I+  +  + + +   S+ QR  P
Sbjct: 767 VSSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYSTKEK---SVFQRGWP 823



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-- 70
             Y N   H+GHA   ++ D++ ++  L G  V F  G D HG  I         + +  
Sbjct: 67  PPYANGALHMGHALNKVLKDIINKYKTLKGFRVHFVPGWDCHGLPIELKVLQNLKSDERK 126

Query: 71  ------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
                        +      N ++      I   +++   T +K +      ++ K+   
Sbjct: 127 NLDTLNLRKKATDYAHIQINNQKEGFKRWGIWGDWNNPYLTLKKSYESAQIGVFGKMFLN 186

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           G IY+G     +S        + E+    D  
Sbjct: 187 GYIYRGLKPVHWSPSSRTALAEAELEYPDDHY 218


>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 910

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 109/269 (40%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ T++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKEMDIMDVWFDSGTSHQGCCA------VRDDLTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S + P  + V +   +   G K+SKSLGNVI P +V +++G + +R +    +   +D
Sbjct: 572 AISGDAPYKELVSAGFVMDGNGNKMSKSLGNVISPNDVGKQLGAEIIRLW-SASVDYTQD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIP--TPGAFTESDESILSVCS 395
                D LK+   ++    I N     +  +    +D      +     E D+ ++    
Sbjct: 631 VRISNDILKQV--SETYRKIRNTFRFLLGNLFNGSFDNRTDLLSYDELEELDKYMVLKFE 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTV 452
           +V+ ++ +  +N   +    ++I+   V     Y D  K     +     +  ++L V  
Sbjct: 689 KVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIEAEKSHKRLSMLTVLY 748

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
            V+ +   LL   +   A +++D +   D
Sbjct: 749 TVLSKSVRLLAPILSFTAEEVYDNMPYED 777



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +  
Sbjct: 47  GKPSYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIEQVL 106

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
            N GV              K +  +     R     L +  D      T + +       
Sbjct: 107 VNNGVDRKSMPATKFRNKCKDYALKQVDKQRADFKKLGVIGDWENPYLTLDPKFEAEQIR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++ K+ DKG IYKG    ++S   E+   + E+   
Sbjct: 167 VFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYR 202


>gi|253995905|ref|YP_003047969.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982584|gb|ACT47442.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 938

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 102/275 (37%), Gaps = 17/275 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + +                 +PADL++ G D     F +       +  + P
Sbjct: 546 LDVWFDSGSTHAAVLKRRP------ELAFPADLYLEGSDQHRGWFQSSLLTGCAIDGHAP 599

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +   G K+SKS GNV+ P +V++  G D LR ++      G+    D+  
Sbjct: 600 YKALLTHGFVVDGSGHKMSKSKGNVVAPQKVMDTYGADILRLWVASTDYSGELTISDE-- 657

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
           + KRV A+    I N + R +   L D+D          + E D   L +  ++   I  
Sbjct: 658 ILKRV-AESYRRIRNTL-RFLLANLADFDATKDLLPVSEWLEIDRYALHLTDKLQTGILA 715

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTV-LYVTVEVIRQLAI 460
           +      H A+ + +S  SE     Y D  K           A  V       +   +  
Sbjct: 716 DYDRYEFHLAVQKFVSFCSEDLGGFYLDILKDRLYTTGETSHARRVAQSTLHHITHTMMR 775

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           L+   +   A++I+  L +  +   F+ L   L  
Sbjct: 776 LMAPILSFTADEIWQTLGLDADKTVFEELWYSLPA 810



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 51  KGAKKFILHDGPPYANGDIHIGHAVNKILKDIIVKSKTFSGFDAPYVPGWDCHGLPIELV 110

Query: 62  AQNAG---VTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +      +           +  +     +     L +   +D+   T + +        
Sbjct: 111 VEKNHGKNIDPAQFRELCRAYAAEQVEKQKKDFIRLGVQADWDNPYLTMDYQTEADIMRA 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              I   G +Y+G     + +   +   + EV  
Sbjct: 171 LGDIYKNGYLYQGSKPVHWCVDCGSALAEAEVEY 204


>gi|255311103|ref|ZP_05353673.1| valyl-tRNA synthetase [Chlamydia trachomatis 6276]
          Length = 939

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYHLFEEYKN--FINKLWNGARFIFGHISELTSRDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K + D+       +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQDSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|294947624|ref|XP_002785427.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
           ATCC 50983]
 gi|239899308|gb|EER17223.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
           ATCC 50983]
          Length = 927

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/449 (15%), Positives = 150/449 (33%), Gaps = 34/449 (7%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD----MADVLDI-SYDDFIRTTEKRHHDTC 106
           DE G+   +     G+  K        + +     + + ++I SY    R+     +   
Sbjct: 405 DESGRFTEEVPPYKGMHVKEADKYIKEDMKKRGLLLHNGMEIHSYPHCWRSDTPLIYRAI 464

Query: 107 RILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              + K+ +  D      +        +++  + N     +            P+     
Sbjct: 465 GSWFIKVEEVRDQLLANNEKSTWVPRHVQEGRFKNWLADARDWGVSRNRYWGTPIPIWAS 524

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + Y   +       L  Y  HP   +     +++    K+G   L               
Sbjct: 525 DDYQEIVCIGSVAELEEYAGHPIPDIHRHFIDDIKIPSKTGRGYLHR------------- 571

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y         + +PAD    G D     F+ +   A  L
Sbjct: 572 -VDEVFDCWFESGSMPYAQVHYPFENKEKFEENFPADFVAEGLDQTRGWFYTMTVIATHL 630

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
                    + +   +   G+K+SK L N  DP EV +  G DA+R ++        +  
Sbjct: 631 FNQPAFKNLIVNGLILAADGKKMSKRLKNYPDPTEVFDRYGADAVRMYMCNSPVVRAEPL 690

Query: 340 FYDKDGL---KKRVNADLANGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILS 392
            + ++G+    K V   L N    LV  +     ++    +P       +   +D  I +
Sbjct: 691 KFREEGVRDTVKEVFLPLYNAYRFLVQETCRFEKQENTKFVPDRACIHKSTNPTDHWIYA 750

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVT 451
               +L+  R  +++  ++  + +++S + ++ + Y    +       + +     L   
Sbjct: 751 TSQELLKYTRTELESYRLYTIVGKLVSFLDDLTNWYIRMNRDRMRGGVDKENTLESLNTL 810

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +V+  L I+L    P +  +I+  L +A
Sbjct: 811 YDVMLNLTIVLAPITPFITEQIYQNLRLA 839



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 20/166 (12%)

Query: 1   MKEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M E +  Y+      +    PH GH     I DV+ R+    G  V    G D HG  + 
Sbjct: 79  MSEGKPEYVFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQTGHHVERRFGWDCHGLPVE 138

Query: 60  KAAQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEK 100
                                      +  V + ++ +R++       I +D+  +T ++
Sbjct: 139 HEIDKDHNIGSKSDVMKWGIANYNEACRSIVTRYTKEWREIVTRFGRWIDFDNDYKTMDR 198

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              +T   ++K++ DKG +Y+      YS       ++ EV +G  
Sbjct: 199 NFMETVWWVFKQLFDKGLVYRAFRVMPYSTALCTPLSNFEVAQGYK 244


>gi|168177519|ref|ZP_02612183.1| leucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182671476|gb|EDT83450.1| leucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 813

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + ++ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWVFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKSMQKHWI 222



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 92/277 (33%), Gaps = 33/277 (11%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNKNSEAAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRY--FDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++ I E++     + ++A+++   + + +Y   DA K                    E I
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYLGIDAIKN--------------ALFLRESI 707

Query: 456 RQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
                LL  F P  A + ++++ +     N  +   D
Sbjct: 708 IDFITLLAPFAPHFAEEQWELIGINSSIFNEKWPEFD 744


>gi|15605023|ref|NP_219807.1| valyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|237804647|ref|YP_002888801.1| valyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255317404|ref|ZP_05358650.1| valyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6226197|sp|O84304|SYV_CHLTR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3328717|gb|AAC67895.1| Valyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|231272947|emb|CAX09858.1| valyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436743|gb|ADH18913.1| valyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748431|gb|ADI50977.1| Valyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749311|gb|ADI51989.1| Valyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 939

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYHLFEEYKN--FINKLWNGARFIFGHISELTSRDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K + D+       +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQDSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|193794438|gb|ACF21431.1| methionyl-tRNA synthetase [Actinomyces oris]
          Length = 168

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
           F+  +G+K S S G VI   + ++    DALRYF+        D  +      +R N +L
Sbjct: 1   FLTMEGKKFSSSHGIVIYVRDFLQRYQADALRYFICAAGPETADADFTWAEFVRRTNGEL 60

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
             G GNLV+R+ SMI K +  + P        D ++L         + + +       AL
Sbjct: 61  VAGWGNLVNRTASMIHKRFGQI-PESAELEGIDRALLDAVEAGFTSVGDLIAQHRQKAAL 119

Query: 415 AQVISLVSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQL 458
            + + LV E ++Y    +P++LK  +P    R +TVL+   + +  L
Sbjct: 120 GEAMRLVGEANKYVADTQPFKLKGEDPATQARLATVLHTLAQAVTDL 166


>gi|254362636|ref|ZP_04978725.1| isoleucine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153094250|gb|EDN75121.1| isoleucine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 938

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 79/489 (16%), Positives = 149/489 (30%), Gaps = 59/489 (12%)

Query: 34  LARF-HRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD 92
           L RF H      V F  G              A            +   +M     IS D
Sbjct: 305 LLRFNHPFYDYSVPFIFGDHVTTDGGTGLVHTAPDHGADDFVVARKYNIEM--AGLISND 362

Query: 93  DFIRTTEKRH-----HDTCRILWKKISDKGD-----IYKGCYSGWYSLRDEA-YYNDDEV 141
              +            ++   + +K+ + G        K  Y   +  +    +    + 
Sbjct: 363 GKFKADTPFFAGLGVFESNDKVVEKLQEVGALLKLSRIKHSYPHCWRHKTPIIFRATPQW 422

Query: 142 YKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNE 195
           + G + Q    Q       V+W+   G     +   ++          + +P+     NE
Sbjct: 423 FIGMETQGLRQQALGEIKSVRWIPSWGEARIDTMVANRPDWCISRQRTWGVPMAMFVHNE 482

Query: 196 VISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ----------------YIMYVWIDALTNY 238
                   L+ +    K  +  GI+   D                    + VW D+ + Y
Sbjct: 483 TEELHPRTLELIEEVAKRVEEKGIQAWWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTY 542

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFI 296
            +        +G+      AD+++ G D     F +    +   +   P  + +     +
Sbjct: 543 ASVVEQRPEFNGNS-----ADMYLEGSDQHRGWFMSSLMLSTATNGKAPYKQVLTHGFTV 597

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
             KG K+SKSLGNVI P EV  + G D LR ++           Y  +        + A 
Sbjct: 598 DEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS-------TDYTGEITVSHNILNSAG 650

Query: 357 GIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
                +  +   +L + +G  P      P      D   ++       +I+E   N   H
Sbjct: 651 ESYRRIRNTARFLLANLNGFDPKSDLVQPQEMIALDRWAVACALEAQNDIKEAYDNYQFH 710

Query: 412 RALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
             + +++   S      Y D  K  +   K +     +       +   L   +   +  
Sbjct: 711 TVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPILSF 770

Query: 469 LANKIFDIL 477
            A++I+  L
Sbjct: 771 TADEIWGYL 779



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 66/226 (29%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLPIELK 106

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 107 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFNTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            + N V     E  
Sbjct: 167 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAVDVNAVEEK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      +  L +   +   + +P  R   +   +   L  L   R
Sbjct: 227 FNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDER 272


>gi|113477079|ref|YP_723140.1| isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110168127|gb|ABG52667.1| Isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 1152

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/299 (20%), Positives = 112/299 (37%), Gaps = 30/299 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ ++      +       +   +P D+++ G D     F +    +   +   P
Sbjct: 542 MDVWFDSGSS------WAAVAQQREGLRYPVDIYLEGSDQHRGWFQSSLLTSIATNGVAP 595

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREIACG 336
               +     +   G K+SKSLGNV+DP+ V             G D LR ++   +   
Sbjct: 596 YQTVLTHGFVLDENGRKMSKSLGNVVDPVIVIEGGKNQKQEPAYGADILRLWV-SSVDYS 654

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            D    K+ LK+   AD+   I N   R +   + D+D            E D  +L   
Sbjct: 655 SDVPLGKNILKQI--ADIYRKIRNTA-RFLLGNIHDFDPAKDAVAYEEMPELDRYMLHRI 711

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVT 451
           + V  E+++        R    + +   V   + Y D  K    +  T+  R  +   V 
Sbjct: 712 TEVFAEVKDGFDKFQYFRFFQTIQNFCVVDLSNFYLDIAKDRLYISATDAFRRRSCQTVL 771

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC-FQSLDQRLKPGFM---LHKTFDPI 506
           V  +  LA  +   +P +A  I+  L      +  F+S   +L+  +    L K ++ +
Sbjct: 772 VVAVENLAKAIAPVLPHMAEDIWQNLPYPTPCKSVFESGWVKLEEKWHNPELVKLWEEL 830



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 16/147 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------KAAQNA 65
             Y N   HIGHA   I+ D++ R+  L G  V +  G D HG  I        K+A+ A
Sbjct: 59  PPYANGNLHIGHALNKILKDIINRYQILQGRKVRYVPGWDCHGLPIELKVIQNIKSAERA 118

Query: 66  GVTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
            +T          F  +     R+      +   ++    T    +      ++ K+  K
Sbjct: 119 KLTPIELRRKARDFALETIDKQRESFKRYGVWGDWEHPYMTLSPEYEAAQIGVFGKMVLK 178

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           G IY+G     +S   +    + E+  
Sbjct: 179 GYIYRGLKPVHWSPSSKTALAEAELEY 205


>gi|305664281|ref|YP_003860569.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378850|gb|ADM28689.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 997

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 136/407 (33%), Gaps = 30/407 (7%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE-AYYNDDEVYKGADGQYYNA--QHN 155
           E        ++ K +    D  +  Y   +       Y+ D + +   +        ++N
Sbjct: 377 EANPMVISDLMKKNLVVFVDEIEHEYPHCWRCETPLMYFADRQWFIKIEPIKDAMIRENN 436

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK-------------- 201
            V+W  E                       +  P+     +    +              
Sbjct: 437 SVRWYPEWAGKRFADWINSARDWCISRERYWGTPLPIWTCMSCGNRIAIGSIDELKQYAL 496

Query: 202 -----SGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
                  +    + R  F       I     +++ VW+D+   +  +       + + + 
Sbjct: 497 NPEELHDIHRPWIDRIKFRCPKCGGIMVREPFVVDVWLDSGMAHTASLK-QIAREENFSI 555

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +P D      D     F+ + + +  L  + P    +     +   G+K+SKS GNVI 
Sbjct: 556 LFPYDWITEAIDQTRGWFYTLLFTSVALYNSTPYRSVLCQGHVLDKFGKKMSKSRGNVIW 615

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK-RVNADLANGIGNLVSRSVSMILK 371
            ++ +++ G D LR +L+ + A   +  +D D  +  R   D+     N     + +   
Sbjct: 616 ALDFMDKNGADVLRLYLLSKAAPWDNINFDPDETQDIRKILDILWNSVNFAITYMDLDKW 675

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFD 429
           D   +          D  I+    R+++ +   + +  +H A+  +++ ++E    RY  
Sbjct: 676 DASNIDKDLQGLLPEDYWIIYELDRLIKSVDAAILSGDLHIAIRNILNFITETLSHRYIT 735

Query: 430 AQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             +P    + +     +   V   V+  L  +L  F P ++  ++  
Sbjct: 736 VIRPRVWLEEDSPEKRSAYAVLYIVLSTLFKILAPFAPFISEYLYQA 782



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 19/185 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++           N   H+GHA      DV+ R+ R+ G  V    G D  G  +   
Sbjct: 43  EQKKLFRFLEGPPTANGFMHVGHARGRTFKDVMLRYMRMKGYCVWDQAGWDTQGLPVELE 102

Query: 62  AQNA--GVTTKVF-----------VDQNSRNFRDMADVLDI------SYDDFIRTTEKRH 102
            +      T K               +    + D      I       YD+   T   R+
Sbjct: 103 VERNLRIKTKKDIETYGVENFVRECQKLVDYYIDSWRKASIRLGLWLDYDNAYETRNPRY 162

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            +      K + D+G +Y+         R E   +  EV +G       + +  V   EE
Sbjct: 163 IEAVWHFLKSMWDRGYLYEDLRVVPVCPRCETALSSHEVAQGYKTIKDPSLYFKVPLEEE 222

Query: 163 EGYFF 167
           +  + 
Sbjct: 223 QNTYL 227


>gi|295135568|ref|YP_003586244.1| valyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983583|gb|ADF54048.1| valyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 876

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 94/255 (36%), Gaps = 14/255 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           +  W  +    ++    +  P+  +   ++P +  V   +IL F    +    +      
Sbjct: 457 LDTWFSSWLWPMSVFNGILEPENDEINYYYPTNDLVTAPEILFFWVARMIIAGYEYRGER 516

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      +      +  K+SKSLGN  DP+ +I++ G D +R  ++     G D  +D+D
Sbjct: 517 PFRNVYLTGIVRDKQRRKMSKSLGNSPDPLGLIDQYGADGVRVGMLLSSPAGNDLMFDED 576

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
             K+   +  AN I N     +     +       P     + +   +   + L EI ++
Sbjct: 577 LCKQ--GSAFANKIWNAFRLVMGW---EVSAATKQPETSKIAIDWYKAKFQKSLAEIEDH 631

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
                I  AL     L+ +     + +  KP        D+        + ++     +L
Sbjct: 632 YSKYRISDALMGTYKLIWDDYCSWFLEMVKP--AYGQPIDKM--TFDSVIAILEDNLRIL 687

Query: 463 QAFVPKLANKIFDIL 477
             F+P +  +I+  +
Sbjct: 688 HPFMPFVTEEIWQTI 702



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 18/161 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ERE   I           H+GH     I DVL R  RL G +  +  GTD        
Sbjct: 30  VDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLKGFNACWVPGTDHASIATEA 89

Query: 61  A----------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRH 102
                             +        +  ++     D    L  S  +D    T +   
Sbjct: 90  KVVAKLKNEGISKNDLSREEFLEHAWEWTHKHGGIILDQLKKLGASCDWDRTKFTMDDNM 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +   ++  + +KG +Y+G     +    +   +D+EV  
Sbjct: 150 SASVIKVFVDLYEKGLVYRGFRMVNWDPEAKTTLSDEEVIY 190


>gi|322804454|emb|CBZ02004.1| leucyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 813

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 91/275 (33%), Gaps = 29/275 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKDNKFTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ I E++     + ++A+++   + + +Y              D      +   E I  
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYL-----------GSDTLRNASF-LRESIID 709

Query: 458 LAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
              LL  F P  A + ++++ +     N  +   D
Sbjct: 710 FITLLAPFAPHFAEEQWELIGINSSIFNEKWPEFD 744


>gi|270263902|ref|ZP_06192170.1| isoleucyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042095|gb|EFA15191.1| isoleucyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 938

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 119/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ E G     +   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPEWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKDTEQLHPRSVELIEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +        +G      
Sbjct: 501 E-QDGIQAWWDLDAADILGADAADYMKVPDTLDVWFDSGSTHSSVVDVRPEFNGHG---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYKEVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       Q+I +   N   H  + +++   S      Y
Sbjct: 668 GFEPSTDCVAPEEMVVLDRWAVGRALAAQQDIEQAYANYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K++     +       +   L   +   +   A++I+  L
Sbjct: 728 LDIIKDRQYTAKSDSIARRSCQTALFHIAEALVRWMAPIMSFTADEIWGFL 778



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGMSGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLYGKPGEKLTPAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G + KG     +     +   + EV                         
Sbjct: 166 IRALGKIISNGHLLKGAKPVHWCTDCGSSLAEAEVEYYDKTSPSIDVAFHAVDAAAVAAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F ++ +   +     +   + LP  R
Sbjct: 226 FGVTHFNGPVSLVIWTTTPWTLPANR 251


>gi|237802725|ref|YP_002887919.1| valyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231273959|emb|CAX10751.1| valyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 939

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYHLFEEYKN--FINKLWNGARFIFGHISELTSRDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K + D+       +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQDSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|153937977|ref|YP_001389549.1| leucyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166231599|sp|A7G9T9|SYL_CLOBL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152933873|gb|ABS39371.1| leucine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317646|gb|ADF98023.1| leucine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 813

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 91/275 (33%), Gaps = 29/275 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNNNEKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ I E++     + ++A+++   + + +Y              D      +   E I  
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYL-----------GSDTLRNASF-LRESIID 709

Query: 458 LAILLQAFVPKLANKIFDILFVADE--NRCFQSLD 490
              LL  F P  A + ++++ +     N  +   D
Sbjct: 710 FITLLAPFAPHFAEEQWELIGINSSIFNEKWPEFD 744


>gi|197123221|ref|YP_002135172.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173070|gb|ACG74043.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 832

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 5/203 (2%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  Y+     YP+   H+GHA    I D LAR  R+ G DVL   G D  G     AA
Sbjct: 33  DADTRYVLEMFPYPSGAMHMGHARVYTIGDALARHLRMRGFDVLHPIGFDALGLPAENAA 92

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
              G        +N  +FR     L  S+  D  + T +  ++   +  + K+ +KG  Y
Sbjct: 93  IKDGRHPAERTRENVVSFRAEMKRLGYSFDWDRELVTADASYYRWNQWFFLKMLEKGIAY 152

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +    +    +++V    D        +PV       + FR++AY  +LL   
Sbjct: 153 RRQGKVNWCTGCQTVIANEQV---VDDNRCERCGSPVVEKIHPEWAFRITAYAQQLLDGL 209

Query: 181 ESHPEFILPIERRNEVISFVKSG 203
           +   ++   +            G
Sbjct: 210 DGLKDWPDRVTTMQRNWIGKSEG 232



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 111/342 (32%), Gaps = 48/342 (14%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI------SFVKSGLKDLSLSRKT 213
                + F    Y    +         ++P+  ++  +          +G   L+     
Sbjct: 423 WHLRDWGFSRQRYWGTPIPIIYCDEHGMVPVPEQDLPVVLPAEAIITGTGEPPLAKVASF 482

Query: 214 FDWGIKIPDDP----QYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGK 265
            +        P       M  ++D+   Y             D   A+ W P D++V G 
Sbjct: 483 VNTTCPRCGKPARREVETMDTFVDSSWYYARYLSPKDEARPFDPEAARRWLPVDVYVGGP 542

Query: 266 DILRFHAIYWPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y+  +            + P+ + V         G K+SK  GNV+ P  ++
Sbjct: 543 EHAVMHLLYFRFWHRVMHELGLVHEDEPVRRLVTQGIVNGPDGRKMSKRWGNVVAPGGMV 602

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YD 374
              G D +R F++      KD  +  + +         +G+   ++R   +       +D
Sbjct: 603 SRFGADTVRMFMLFAAPPEKDIDWSDEQV---------DGLFRFLARVWRIYFARQACFD 653

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQN-QLIHRALAQVISLVSEVDRYFDAQKP 433
                          +     R ++ + E ++     + ++A ++ LV+ +  +    +P
Sbjct: 654 ASEAALAQAAGEALELRRRTHRTIKRVTEGLEADLKFNTSIAALMELVNALYAF----EP 709

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                + PDRA+    +                P +A +++ 
Sbjct: 710 ----ASEPDRAAVREALLALATLLAPFA-----PHVAEELWH 742


>gi|70983518|ref|XP_747286.1| valyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66844912|gb|EAL85248.1| valyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159123709|gb|EDP48828.1| valyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 1057

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/445 (16%), Positives = 129/445 (28%), Gaps = 75/445 (16%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRD-------EAYYNDDEVYKGAD-----GQY 149
             D    + + + +KG   K   +     R        E         K  D      + 
Sbjct: 428 RFDARYKVIEMLKEKGLYVKWENNPMKIPRCAKSNDVIEPILKPQWWMKMQDLAEPAIKA 487

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                  ++    E  +FR     +      +       P                +L +
Sbjct: 488 VENGEIVIKPESAEKNYFRWMRSINDWCLSRQLWWGHQAPAYFVKIEGEDGDDSDGNLWV 547

Query: 210 S------------RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +             K       +  DP  ++  W  +     +T G+           +P
Sbjct: 548 TGRTEEEARKKAEAKFPGKTFSLVRDPD-VLDTWFSSGLWPFSTLGWPRQTH-DLENLYP 605

Query: 258 ADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPI 314
             +   G DIL F    +      L+  +P  K+V+ H  I   +G K+SKSLGNVIDP+
Sbjct: 606 TSVLETGWDILFFWVARMIMLGIKLTGKVPF-KEVYCHSLIRDSEGRKMSKSLGNVIDPL 664

Query: 315 EVI-------------------------------------EEVGVDALRYFLVREIACGK 337
           +V+                                      E G DALR+ LV     G 
Sbjct: 665 DVMEGIELQALHAKLLTGNLAEKEVATATKYQKKAFPKGIPECGADALRFALVSYTTGGG 724

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCS 395
           D  +D   +         N I       +  +  D+  +      G  + S+  IL   +
Sbjct: 725 DIAFDIQVI--HGYRRFCNKIYQATKFVLGRLGDDFKPLPAPSKTGRESLSERWILHKFN 782

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS-TVLYVTV 452
              +E+ E +  +    A +           D + +  K + L    P     +      
Sbjct: 783 TAAKEVNEALAQREFSVAASTTYQYWYGQLCDIFIENSK-YLLAPEVPAEVQESAKQTLY 841

Query: 453 EVIRQLAILLQAFVPKLANKIFDIL 477
             +     L+   +P +   ++  L
Sbjct: 842 TALEGALTLIHPIMPFVTEHLWQRL 866



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 21/149 (14%)

Query: 2   KEREKLYISTAIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           K + + Y    I  PN     H+GHA    + D + R+ R+ G   L+  G D  G    
Sbjct: 127 KVKPEGYFVIPIPPPNVTGSLHMGHALTNALQDTMIRWERMKGKTTLWLPGMDHAGISTQ 186

Query: 60  KAAQNAGVT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEK 100
              +                         + D+   N ++    +  S+D      T + 
Sbjct: 187 SVVEKMLWKKEKKTRHDLGREEFTKRVWAWKDEYHANIKNALRRVGGSFDWSREAFTMDP 246

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYS 129
                    + ++ ++G IY+      + 
Sbjct: 247 NLSAAVTETFVRLHEEGIIYRANRLVNWC 275


>gi|317121723|ref|YP_004101726.1| isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591703|gb|ADU50999.1| Isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 946

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 100/269 (37%), Gaps = 19/269 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
             +   IM VW D+ +++                 WPADL++ G D     F +    A 
Sbjct: 519 FRNETDIMDVWFDSGSSHAAVLETRP------ELAWPADLYLEGSDQHRGWFQSSLLTAV 572

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G K+SKSLGNV+DP +VI   G D LR + V       D
Sbjct: 573 ATRGQAPYRAVLTHGFVVDGEGRKMSKSLGNVVDPNDVIRRYGADVLRLWAVSSDY-RGD 631

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
               +D LK+   A++   I N + R +   L D+D            E D   L+  ++
Sbjct: 632 VRISEDILKQ--MAEIYRKIRNTL-RFLLGNLGDFDPARDAVAYDQLPELDRWALARLAQ 688

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDRASTVLYVTV 452
           V + +R        H     + +         Y D  K         +P R      V  
Sbjct: 689 VTERVRRAYDEYQYHVLYHTIHNFCVTDLSAFYLDVLKDRLYASLPADPGR-RAAQTVLY 747

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
           ++ R L +LL   +   A +++  L   D
Sbjct: 748 QLARTLTLLLAPVLCHTAEEVWGHLPRVD 776



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA--- 61
            +  +     Y N   H+G A   ++ DV+ R+  + G D  +  G D HG  I +    
Sbjct: 48  PRFVLHDGPPYANGDIHVGTALNKVLKDVVVRYASMAGYDAPYVPGWDTHGLPIERRALE 107

Query: 62  ----------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             + +        R     L +   ++    T E  +      +
Sbjct: 108 VLGVDRRAISPVELRNHCRAYALDQMNRQRQQFRRLGVLGDWERPYLTLEPEYEAKQVEV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           + +++ +G IY+  YS ++   DE    + E+   
Sbjct: 168 FGEMARRGYIYRSLYSVYWCPVDETALAEAEIEYR 202


>gi|269219680|ref|ZP_06163534.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210922|gb|EEZ77262.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 894

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 9/271 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           IM  W  +  +     G+L + D   ++ +P D+   G+DI+     +    A L     
Sbjct: 532 IMDTWATSSLSPQIAGGWLTDED-LFSRVYPMDVRPQGQDIIRTWLFSSMVRAHLEFGEN 590

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  +D+ 
Sbjct: 591 PWKHAAISGWILDPDRKKMSKSKGNVVTPMALLEKHGSDAVRYW-AASARLGVDATFDEQ 649

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K  +   LA  + N    ++SM  +     +        +D ++L+  + V+ E   +
Sbjct: 650 QMK--IGRRLAMKVLNASKFALSMGGEGAPADVDVAAVTEPADRAVLAGLADVVDEATAS 707

Query: 405 MQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
                  RAL    S   S  D Y +  K          R++ V       +     LL 
Sbjct: 708 FDAYDHTRALELAESCFWSFCDDYLELVKDRAYSDEPSSRSARV--ALNVAVDVFLRLLA 765

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            F+P    +++        +R      + L+
Sbjct: 766 PFIPYATEEVWSWFRTGSVHRAVWPSSEPLR 796



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            RE +Y I T     +   H+GH +     D +AR+ R+ G  V +  G D++G    + 
Sbjct: 53  TRENVYSIDTPPPTVSGSLHVGHVFSYTHTDTMARYQRMRGKSVFYPMGWDDNGLPTERR 112

Query: 62  AQN 64
            QN
Sbjct: 113 VQN 115


>gi|54020318|ref|YP_115548.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823564|sp|Q602B7|SYI_MYCH2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53987491|gb|AAV27692.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 886

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 19/261 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++       + P        P D++  G D     F++    + 
Sbjct: 512 WTKENDILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSV 563

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P  K +     +  KG K+SKS GN +DP+ ++ + G D  R ++        D
Sbjct: 564 IYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANSEY-YND 622

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y +   ++  N ++   I N    +V  ++ +     P     TE D  I +   ++ 
Sbjct: 623 IVYSEAIFEQ--NVEIYRKIRN----TVRFLITNLADFKPKKYELTEVDLYIFNKIQKLK 676

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
            EI +N       R +  + + + E  + Y    K      K    +   V Y   E+++
Sbjct: 677 NEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKEESLKRRQVQYNLYELLQ 736

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L I +   +P  A +I+  +
Sbjct: 737 VLNIAIAPIMPTTAEEIYSFI 757



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 48  RGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENK 107

Query: 62  AQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             N   +            F +            L++   +    +T    +      L+
Sbjct: 108 IINQIGSKSTLEIRRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLF 167

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           KK+  +G +Y+     ++S   ++   + E+  
Sbjct: 168 KKMVSRGLVYRALKPVYWSPSSQSALAEAEIEY 200


>gi|172057960|ref|YP_001814420.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|254782405|sp|B1YIS7|SYI_EXIS2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171990481|gb|ACB61403.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 911

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/465 (14%), Positives = 141/465 (30%), Gaps = 34/465 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNS---RNFRDMADVLDI--SY 91
           F       +      D+ G   A+A    G+  +    +          +  +  I  SY
Sbjct: 332 FRIGQAYGLDVLCPVDDKGVMTAEAPGFEGLFYEDANKEIGVALEEAGALLKLSFIKHSY 391

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               RT +          +  I D              + +   + +  ++     +   
Sbjct: 392 PHDWRTKKPVIFRATPQWFASIKDFRAEILDEIKEVQWVPE---WGETRLHNMFKDRGDW 448

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  W       F      + +      H   +      N         L     + 
Sbjct: 449 VISRQRAWGVPL-PIFYAEDGTEIVTPETIDHIANLFAAHGSNVWYEREAVDLLPEGFTH 507

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                GI        IM VW D+ +++          +       PADL++ G D     
Sbjct: 508 PASPNGI--FKKETDIMDVWFDSGSSHAGVLATRPELER------PADLYLEGSDQYRGW 559

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    +   +   P    V     +  +G K+SKS+GN I PI+++++ G + LR ++
Sbjct: 560 FNSSLSTSVATTGKAPYKAVVSHGFVLDGQGRKMSKSIGNTIAPIQIMQQFGAEILRLWV 619

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFT 384
                   D     D  K+   +         +  +V  +L + D    T          
Sbjct: 620 ASVDYQ-SDVRASMDNFKQVSES------YRKIRNTVRFLLGNLDQFDHTTHRVAFKDLP 672

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNP 441
           ESD  + +   +++ +++              + +         Y D  K    ++K + 
Sbjct: 673 ESDRFMRTKLDQLVGKVKAAYDAYDFMAVYQLLHNFCVLDLSSFYLDYTKDILYIEKEDA 732

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                V  V  + +  L  L+   +P  A++ ++ +   +    F
Sbjct: 733 PARRAVQTVMYDTVVTLLQLMAPVLPHTADEAWEFVPGVETASIF 777



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   H+GH    ++ D++ R+  ++G    +  G D HG  I  A 
Sbjct: 46  GKPTFILHDGPPYANGDIHMGHGLNKVLKDIVVRYKSMNGFRSPYVPGWDTHGLPIETAL 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           Q AGV  K             +  +   + R+    L +   YD+   T +         
Sbjct: 106 QKAGVDRKSMSVAEFRELCAKYALEQVDHQREQFKRLGVLGDYDNPYITLQPEFEAAQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           L+  +++KG IYKG    ++S   E+   + E+  
Sbjct: 166 LFGDMANKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 933

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 140/432 (32%), Gaps = 29/432 (6%)

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   M ++      D+   T      T +   +   + GD+ +        +     +  
Sbjct: 390 HILKMQEITHSYPHDWRSKTPVIFRATEQWFIRM--EGGDLRERTLKVIDKINFIPSWGK 447

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           + +    + +          W      F+     ++            ++     N  + 
Sbjct: 448 NRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICGLVREHGSNIWVE 507

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                L    L  K    G+K+  +   IM VW D+ +++       +          PA
Sbjct: 508 KTPEELIGEELLVKYNLKGLKLRKETN-IMDVWFDSGSSHRGVLEVWEGLRR------PA 560

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL++ G D     FH     +   + + P    +        +G K+SKSLGN + P +V
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLGNTVSPADV 620

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I+  G D LR +    +    D     + LK+   ++    I N     +          
Sbjct: 621 IKVYGADILRLWC-GSVDYRDDVRISDNILKQ--MSEAYRRIRNTARYILGNSYDFNPKT 677

Query: 377 IPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKP 433
              P     E D+  L+    + + + E+      +     +   + +     Y D  K 
Sbjct: 678 DKVPYKDMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKD 737

Query: 434 WEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL--- 489
               +K +         V  EV+  L  ++   +   A +I++ L    E R  +S+   
Sbjct: 738 RLYTEKKDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESL--PAETRESESIFLA 795

Query: 490 ------DQRLKP 495
                 D+ LKP
Sbjct: 796 DWYVNNDEYLKP 807



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + +  +     ++    L +   +D+   T + R    
Sbjct: 108 VVKEVGVSKAREMSALEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I + G I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIE-----YYDHTSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      + +    GL  
Sbjct: 223 LLDKIGFNEDAYVLIWTTTPWTLPANVAICLNANFDYGLYK 263


>gi|254497733|ref|ZP_05110506.1| isoleucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254353026|gb|EET11788.1| isoleucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 914

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 95/282 (33%), Gaps = 14/282 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
            + D     M VW+D+   +            +    +PAD++  G D     F++    
Sbjct: 505 PLYDKINDTMDVWLDSGVTHFCVLK------QNNELAFPADIYFEGSDQHRGWFNSSLTT 558

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  +    P    +     +  +G K+SKS GN +   +++ + G D LR ++       
Sbjct: 559 SVAMYGVAPYKMVLTHGYTVDAEGRKLSKSKGNYVALDQMVNQHGADILRLWVASTDYRH 618

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +    D+     + NAD    I N     ++ +               E D+  +  C  
Sbjct: 619 EVSISDE---IIKRNADAYRRIRNTARFLLANLFDFAPAEAVQADELLELDKWAIKRCQL 675

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT-VE 453
           + +EI    ++   H    ++ +   V     Y D  K  +       +A          
Sbjct: 676 LQEEIIAAYESYQFHVIYQKIHNFCAVDMGSFYLDLIKDRQYTTGKQSKARRSCQTAMYH 735

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +IR   + L   +   A +I   +    E   F  L  +  P
Sbjct: 736 IIRAFTLWLAPILSFTAEEIARYIPGYTEQTIFTELWYKDWP 777



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 57/202 (28%), Gaps = 15/202 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 33  KKFILHDGPPYANGHLHCGHALNKILKDIIIKSKSFSGYDAPFVPGWDCHGLPIELNVEK 92

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
                             + +        RD    L +  D +    T + R+       
Sbjct: 93  KIGRVGDKVTAREFRAKCREYAGSQIDIQRDEFQRLGVFGDWYNPYVTMDFRYEANIVRA 152

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
              +   G + +G     + +   +   + EV                   EE    F +
Sbjct: 153 LGLMIQNGHLQQGFKPVHWCIDCGSALAEAEVDYEEKTSLSIDVAFTAINPEEFIAPFHV 212

Query: 170 SAYQDKLLSYYESHPEFILPIE 191
                KL     +   + LP  
Sbjct: 213 LGEAKKLSVPIWTTTPWTLPAN 234


>gi|152967441|ref|YP_001363225.1| isoleucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361958|gb|ABS04961.1| isoleucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 1085

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 89/261 (34%), Gaps = 18/261 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV--IGKDILRFHAIYWPAFLLSANL 284
           ++  W ++ +       Y           +P D  V  IG+    F+ ++  A  L    
Sbjct: 561 VLDCWFESGSMPFAQVHYPFENSEWFESHYPGDFIVEYIGQTRGWFYTLHVLATALFDRP 620

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK-DGFYDK 343
                V     +   G K+SKSL N  D  EV++  G DA+R+FL+        +    +
Sbjct: 621 AFRTAVSHGILLGDDGRKMSKSLRNYPDVSEVLDRDGSDAMRWFLMSSPVLRGGNLIVTE 680

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSRVLQ 399
            G++  V   L       +  + S +         TP   T S    D  +L+     + 
Sbjct: 681 QGIRDSVRQVLLP-----LWNTFSFLRLYSGTSSHTPRWRTTSPDVLDRYVLAKLHDTVV 735

Query: 400 EIRENMQNQLIHRALAQVISLVS-EVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIR 456
            + E +    I  A   V   +    + Y        W       +RA         V+ 
Sbjct: 736 TVTEQLDAYDIAGACETVRQFLDSLTNWYVRRSRAAFW---DGESERARDAFDTLHTVLE 792

Query: 457 QLAILLQAFVPKLANKIFDIL 477
               LL   +P ++ +I+  L
Sbjct: 793 TTTRLLAPMLPLVSEEIWRAL 813



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 23/149 (15%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     + D++ R+  + G  V    G D HG      A+         
Sbjct: 70  PPFANGLPHYGHLLTGYVKDLVPRYKTMRGHRVERRFGWDTHGLPAEVEAEKQLGITHKS 129

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +  R     A  +D   D   +T +  + ++    +K
Sbjct: 130 QIDELGIATFNETCRTSVLRYTAEWERYVTRQARWVDFDNDY--KTLDTDYMESVMWAFK 187

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            + DKG IY+G     Y  R E   ++ E
Sbjct: 188 TLWDKGLIYEGFRVLAYCWRCETPLSNSE 216


>gi|288957547|ref|YP_003447888.1| isoleucyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288909855|dbj|BAI71344.1| isoleucyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 943

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 17/266 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW ++ +++             +   WPADL++ G D     FH+    +       
Sbjct: 547 IVDVWFESGSSHAFVLE-----QRLEELAWPADLYLEGSDQHRGWFHSSLLESCGTRGRA 601

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  +G K+SKSLGNV+ P EV ++ G D LR +++      +D    K+
Sbjct: 602 PYNAVLTHGFVLDEQGRKMSKSLGNVVAPQEVCDQYGADILRLWIINSDYS-EDLRIGKE 660

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K +  ADL   + N +   +  +               E +  +L   S +   +RE 
Sbjct: 661 IIKTQ--ADLYRRLRNTLRYLLGALADYGPAERIDAAEMPELERWVLHRLSELDTLVREK 718

Query: 405 MQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAIL 461
           +     H     + +   V     YFD +K        +  R  +V  V   +   L   
Sbjct: 719 VDAYDFHALFVALHNFCAVELSAFYFDVRKDSLYCDAVDSVRRRSVRTVMEHLFSTLTAW 778

Query: 462 LQAFVPKLANKIF----DILFVADEN 483
           L   +   A + +    + L  ++E+
Sbjct: 779 LAPILCFTAEEAWLARPEGLGWSEES 804



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   HIGHA   I+ DV+ RF ++ G D  +  G D HG  I   
Sbjct: 47  KGRKKFVLHDGPPYANGNIHIGHAVNKILKDVIVRFRQMQGFDADYVPGWDCHGLPIEWK 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +           +  +  ++  DV  I +    R   +         ++++  +GD  +
Sbjct: 107 IEE----------KYRKAGKNKDDVPIIQFRAECRQFAEEWVGIQAAEFRRLGVEGDWKR 156

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +  +    +      E++K A          PV W   E      +  +    +   
Sbjct: 157 PYATMTFPAEAQIV---REIHKFALNGGLYKGFKPVMWSVVEKTALADAEVEYHDHTSTT 213

Query: 182 SHPEFILP 189
               F + 
Sbjct: 214 VFARFPVW 221


>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 930

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 514 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 568 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 626

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 627 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 680

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 681 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 740

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDIL 477
              +    L  LL   +P  A +I+  L
Sbjct: 741 VFYQTAVALTKLLTPIIPHTAEEIWSFL 768



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 102

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R+    L ++ D      T +  +     
Sbjct: 103 LANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQV 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 163 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 198


>gi|258614578|ref|ZP_05712348.1| methionyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 257

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLAILLQA 464
               + ALA++  L+S  ++Y D  +PW L K    +A   +V+    E +R  AILLQ 
Sbjct: 3   KMEFNTALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQP 62

Query: 465 FVPKLANKIFDILFVADENRCFQSLD-QRLKPGFMLHKTFDPIFPRF 510
            + +   KIF+ L +  E    + L       G  +     PIFPR 
Sbjct: 63  IMTETPEKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRL 109


>gi|256027633|ref|ZP_05441467.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 933

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 140/432 (32%), Gaps = 29/432 (6%)

Query: 79  NFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
           +   M ++      D+   T      T +   +   + GD+ +        +     +  
Sbjct: 390 HILKMQEITHSYPHDWRSKTPVIFRATEQWFIRM--EGGDLRERTLKVIDKINFIPSWGK 447

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           + +    + +          W      F+     ++            ++     N  + 
Sbjct: 448 NRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICGLVREHGSNIWVE 507

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                L    L  K    G+K+  +   IM VW D+ +++       +          PA
Sbjct: 508 KSPEELIGEELLVKYNLKGLKLRKETN-IMDVWFDSGSSHRGVLEVWEGLRR------PA 560

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL++ G D     FH     +   + + P    +        +G K+SKSLGN + P +V
Sbjct: 561 DLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLGNTVSPADV 620

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I+  G D LR +    +    D     + LK+   ++    I N     +          
Sbjct: 621 IKVYGADILRLWC-GSVDYRDDVRISDNILKQ--MSEAYRRIRNTARYILGNSYDFNPKT 677

Query: 377 IPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKP 433
              P     E D+  L+    + + + E+      +     +   + +     Y D  K 
Sbjct: 678 DKVPYKDMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKD 737

Query: 434 WEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL--- 489
               +K +         V  EV+  L  ++   +   A +I++ L    E R  +S+   
Sbjct: 738 RLYTEKKDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESL--PAETRESESIFLA 795

Query: 490 ------DQRLKP 495
                 D+ LKP
Sbjct: 796 DWYVNNDEYLKP 807



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + +  +     ++    L +   +D+   T + R    
Sbjct: 108 VVKEVGVSKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I + G I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIE-----YYDHTSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      + +    GL  
Sbjct: 223 LLDKIGFNEDAYVLIWTTTPWTLPANVAICLNANFDYGLYK 263


>gi|297727735|ref|NP_001176231.1| Os10g0506200 [Oryza sativa Japonica Group]
 gi|222613104|gb|EEE51236.1| hypothetical protein OsJ_32094 [Oryza sativa Japonica Group]
 gi|255679539|dbj|BAH94959.1| Os10g0506200 [Oryza sativa Japonica Group]
          Length = 1042

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 137/419 (32%), Gaps = 87/419 (20%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +   + V+ M +  +F   S      L   ++    I+PI+   +   +++  ++D  
Sbjct: 443 RCSRTKDIVEPMMKPQWFVDCSTMAKAALDAVKTKRIEIIPIQYEQDWYRWLE-NIRDWC 501

Query: 209 LSRKTFD------WGIKIPDDPQY------------------------------------ 226
           +SR+ +       W + + DD +                                     
Sbjct: 502 ISRQLWWGHRIPAWYVTLEDDEEKDIGSYIDHWIIARNESDAILEAKQRYPGKNYKLDQD 561

Query: 227 --IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +    L+  G+ D+     + F+P  +   G DIL F    +     LL  
Sbjct: 562 PDVLDTWFSSGLFPLSVLGWPDSTA-DLSSFYPTSVLETGLDILFFWVARMVMMGMLLGG 620

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++P  K           G K++K LGNVIDPI+VI  + ++ L   L        +    
Sbjct: 621 DVPFQKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLDPSELEKA 680

Query: 343 KDGLKK--------------------------RVNADL-----ANGIGNLVSRSVSMILK 371
           K+G KK                          ++N D+          N +  +V   + 
Sbjct: 681 KEGQKKDFPNGIPECGTDALRFALISYTSQSDKINLDIKRVHGYRQWCNKLWNAVRFAMN 740

Query: 372 DYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
                   P A          + ILS  ++ + +   +M+      A + + S       
Sbjct: 741 KLGDQYTPPAAIALCSMPPLCKWILSALNKAVGKTVSSMEACKFSEATSSMYSWWQYQLC 800

Query: 425 DRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D + +A KP+  +    +             +     LL  F+P +  +++  L    E
Sbjct: 801 DVFIEAVKPYFNQSQELESERGACRDTLWICLDTGLRLLHPFMPYITEELWQRLPQPKE 859



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 49/162 (30%), Gaps = 19/162 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 113 SSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWRRMSGYNALWVPGMDHAGIATQVV 172

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + DQ+          L  S D      T +++ 
Sbjct: 173 VEKRLMRDRNLSRHDLGRDKFLLEVLQWKDQHGGTILKQLRTLGASLDWSRECFTMDEKR 232

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                  + ++  +G IY+      +        +D EV   
Sbjct: 233 SKAVTEAFIRLHKEGLIYRDNRIVNWDCSLRTAISDIEVDYC 274


>gi|189188390|ref|XP_001930534.1| isoleucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972140|gb|EDU39639.1| isoleucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1079

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 98/272 (36%), Gaps = 11/272 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G  +      +   W ++ +    +  Y         K +P D    G D     F+ + 
Sbjct: 511 GKGVLRRTNEVFDCWFESGSMPYASAHYPFENVEQFEKSFPGDFIAEGLDQTRGWFYTLT 570

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L   LP    V +   +   G+K+SK L N  DP  ++   G DALR +L+    
Sbjct: 571 VLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMNNYGSDALRLYLINSPV 630

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR-----SVSMILKDYDGMIPTPGAFTES--- 386
              +    K+   K + + +   + N         ++   + D D +       T +   
Sbjct: 631 VRAETLRFKEAGVKEIVSKVLLPLWNSYQFFEQQVTLLKKVADLDFVFDPAAGKTNANVL 690

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAS 445
           D  IL+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   +   
Sbjct: 691 DRWILASCQSLLKFVNEEMAAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGEHGLEDTK 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             L    EV+  L   L  F P + + I+  L
Sbjct: 751 HALNTLFEVLYTLCRGLAPFTPFITDNIYLRL 782



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKQPYTFYDGPPFATGMPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   D L   I +D+  +T +   
Sbjct: 90  IDKELGMSGRDAVREIGIAKYNEKCRAIVMRYATEWRATIDRLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            +T   ++K++ DKG +Y+
Sbjct: 150 METEWWVFKRLFDKGAVYR 168


>gi|21230613|ref|NP_636530.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769391|ref|YP_244153.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81304652|sp|Q4US40|SYI_XANC8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81795655|sp|Q8PBG6|SYI_XANCP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21112194|gb|AAM40454.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574723|gb|AAY50133.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 943

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 92/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLTGVAMDKVA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P E++  +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQEIMRTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDDMVLLDRWIVHRAHELQEKIT 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKP 495
             +   +   A +++  L      N  F +    L P
Sbjct: 777 RWIAPVLSFTAEELWAYLPGEHSGNVLFATWYDGLAP 813



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKFGKVGVKLDAAQFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVIDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 930

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 514 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 568 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 626

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 627 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 680

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 681 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 740

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDIL 477
              +    L  LL   +P  A +I+  L
Sbjct: 741 VFYQTAVALTKLLTPIIPHTAEEIWSFL 768



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 102

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R+    L ++ D      T +  +     
Sbjct: 103 LANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQV 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 163 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 198


>gi|31432951|gb|AAP54522.1| Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group]
 gi|62733612|gb|AAX95729.1| valyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 1056

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 137/419 (32%), Gaps = 87/419 (20%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
             +   + V+ M +  +F   S      L   ++    I+PI+   +   +++  ++D  
Sbjct: 457 RCSRTKDIVEPMMKPQWFVDCSTMAKAALDAVKTKRIEIIPIQYEQDWYRWLE-NIRDWC 515

Query: 209 LSRKTFD------WGIKIPDDPQY------------------------------------ 226
           +SR+ +       W + + DD +                                     
Sbjct: 516 ISRQLWWGHRIPAWYVTLEDDEEKDIGSYIDHWIIARNESDAILEAKQRYPGKNYKLDQD 575

Query: 227 --IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSA 282
             ++  W  +    L+  G+ D+     + F+P  +   G DIL F    +     LL  
Sbjct: 576 PDVLDTWFSSGLFPLSVLGWPDSTA-DLSSFYPTSVLETGLDILFFWVARMVMMGMLLGG 634

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           ++P  K           G K++K LGNVIDPI+VI  + ++ L   L        +    
Sbjct: 635 DVPFQKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLDPSELEKA 694

Query: 343 KDGLKK--------------------------RVNADL-----ANGIGNLVSRSVSMILK 371
           K+G KK                          ++N D+          N +  +V   + 
Sbjct: 695 KEGQKKDFPNGIPECGTDALRFALISYTSQSDKINLDIKRVHGYRQWCNKLWNAVRFAMN 754

Query: 372 DYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
                   P A          + ILS  ++ + +   +M+      A + + S       
Sbjct: 755 KLGDQYTPPAAIALCSMPPLCKWILSALNKAVGKTVSSMEACKFSEATSSMYSWWQYQLC 814

Query: 425 DRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D + +A KP+  +    +             +     LL  F+P +  +++  L    E
Sbjct: 815 DVFIEAVKPYFNQSQELESERGACRDTLWICLDTGLRLLHPFMPYITEELWQRLPQPKE 873



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 49/162 (30%), Gaps = 19/162 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 113 SSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWRRMSGYNALWVPGMDHAGIATQVV 172

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + DQ+          L  S D      T +++ 
Sbjct: 173 VEKRLMRDRNLSRHDLGRDKFLLEVLQWKDQHGGTILKQLRTLGASLDWSRECFTMDEKR 232

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
                  + ++  +G IY+      +        +D EV   
Sbjct: 233 SKAVTEAFIRLHKEGLIYRDNRIVNWDCSLRTAISDIEVDYC 274


>gi|294627038|ref|ZP_06705628.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598700|gb|EFF42847.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 926

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 93/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKVA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 584 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
             K+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 643 IFKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDEMVLLDRWIVHRAHELQEKIV 699

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 700 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 759

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 760 RWIAPVLSFTAEELWGYLPGKHVDNVLFATWYDGLAP 796



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 31  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 90

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 91  EKKYGKVGVKLDAAEFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 150

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 151 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 186


>gi|292654629|ref|YP_003534526.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372251|gb|ADE04478.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 958

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 93/245 (37%), Gaps = 21/245 (8%)

Query: 251 SKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               ++P D    G D++  H  +  +    L      P+ +   G  L +GEK+S S G
Sbjct: 577 EWDYWYPVDYRFSGNDLITNHLTFYQFHHGELFDEPQWPRGIVIMGMGLLEGEKMSSSKG 636

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           +V+ P E I E G D +R+FL+      +D  +  D +         + +    +R+  +
Sbjct: 637 HVVLPGEAIGEYGADTVRFFLLNSAEPWQDYDWRDDLVGSVH-----DQLERFWNRAQEI 691

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY- 427
           I    D            D  +LS     ++++   M       A             Y 
Sbjct: 692 IT---DPGPDDQPDLETVDRWLLSKLQDTVRDVTTAMDEAETRSASQAAF--------YN 740

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCF 486
           F+    W  ++T+ DR +   +    V+     LL  F+P + N++ + L     E+  +
Sbjct: 741 FEESLRWYRRRTDLDRPAA-KWTLRTVLETRLRLLAPFIPFMTNELHEQLTGTPAEDAPW 799

Query: 487 QSLDQ 491
              D+
Sbjct: 800 PEPDE 804



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 8   YISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
           +++    YP+   HIGHA    + DV AR+ R  G +VLF       G  I  A +    
Sbjct: 35  FVTVPYPYPSGGMHIGHARTYTVPDVYARYRRQQGDNVLFPIAWHVTGTPIIGAVERLQN 94

Query: 68  ------------------------TTKVFV-DQNSRNFRDMADVLDISYD--DFIRTTEK 100
                                   +   +       +++     L +S D      T  +
Sbjct: 95  REEKQLSVLTDTYNVPEDTLSDLESPMGWARYFIEEHYKKGMQSLGLSVDWRREFTTNNE 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           R+       ++ + D+G + KG +   +   +E      ++ +G +
Sbjct: 155 RYSKFVEWQYRTLRDRGRLEKGLHPVKFCTNEEQPVTTHDLLEGEN 200


>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 932

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDIL 477
              +    L  LL   +P  A +I+  L
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFL 770



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R+    L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|160897659|ref|YP_001563241.1| valyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160363243|gb|ABX34856.1| valyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 970

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/388 (15%), Positives = 117/388 (30%), Gaps = 91/388 (23%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQY---- 226
             K +    S     +P    N   +   + ++D  +SR+   WG  I    D       
Sbjct: 401 AQKAIDAVSSGQVQFVPENWVNT-YNQWMNNIQDWCISRQ-LWWGHQIPAWYDEDGKVYV 458

Query: 227 ---------------------IMYVWIDALTNYLTTTGYLDNP---DGSKAKFWPADLHV 262
                                ++  W  +     +T G+ +     D     + P+ + V
Sbjct: 459 ARTEEEARAQAPGKTLTRDEDVLDTWYSSALVPFSTMGWPNQTEAADDDYNLYLPSSVLV 518

Query: 263 IGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE- 319
            G DI+ F    +       +  +P             +G+K+SKS GNV+DP+++I+  
Sbjct: 519 TGYDIIFFWVARMIMMTTHFTGRVPFRHVYMHGLVRDAQGKKMSKSEGNVLDPVDLIDGI 578

Query: 320 ------------------------------------VGVDALRYFLVREIACGKDGFYDK 343
                                                G DALR+      + G+   +D 
Sbjct: 579 DLDTLLDKRTQGLRRPETAPQVRKNTQKEFPEGIPAYGADALRFTFAALASLGRSINFDS 638

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDG--------------MIPTPGAFTESDES 389
              +     +  N + N  SR V M  + +D                      F++ D  
Sbjct: 639 KRCEG--YRNFCNKLWN-ASRFVLMNCEGHDCGLLPHTKEQCQAGGEFAGYMQFSQPDRW 695

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTV 447
           I S   +V  E+ +      +      +   V     D Y +  K  +++  N  +    
Sbjct: 696 IASQLQKVEAEVAKGFAEFRLDNVANALYDFVWNEFCDWYLEIAKV-QIQTGNEAQQRAT 754

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
               +  +  +  L    +P +   ++ 
Sbjct: 755 RRTLIRTLEAILRLAHPIIPFVTEALWQ 782



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 29/182 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +           H+GHA+   I D L R+HR+ G + ++  GTD  G       
Sbjct: 49  SQPSFSVQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGHNTVWVPGTDHAGIATQIVV 108

Query: 63  QNAGV------------TT---------KVFVDQNSR------NFRDMADVLDISYDDFI 95
           +                T          KV+  +N          R M D +D S + F 
Sbjct: 109 ERQLQEQGIASRHDMGATPPEARKNFVSKVWEWKNQSGNTITGQMRRMGDSVDWSREYF- 167

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
            T + +        + ++  +G IY+G     +  +  +  +D EV              
Sbjct: 168 -TMDDKLSSIVNETFVRLYQQGLIYRGKRLVNWDPKLMSAVSDLEVENEEKDGSLWHIAY 226

Query: 156 PV 157
           P+
Sbjct: 227 PL 228


>gi|325294834|ref|YP_004281348.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 121/381 (31%), Gaps = 26/381 (6%)

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSA 171
           + +                     N  E               P V +  EE      S 
Sbjct: 426 LREVALKEIDKVQWIPEWGKTRIKNMVEGRPDWCISRQRIWGVPIVAFYCEECGETIYSK 485

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVW 231
                ++            +R  + +         L    K    G +       I+ VW
Sbjct: 486 EIADYVANIFEKESADAWYKREAKEL---------LPEGFKCPKCGGEKFKKEMDILDVW 536

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKK 289
            D+ +++                 WPAD+++ G D     F A    +       P    
Sbjct: 537 FDSGSSHAAVLERRP------ELSWPADMYLEGSDQHRGWFQASLLESCGTRKEAPYKSV 590

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +     +  KG K+SKSLGNV+ P +V+++ G D LR ++  E    +D    ++ LK+ 
Sbjct: 591 LTHGFTLDEKGHKMSKSLGNVVAPEDVVKKFGADILRLWVASEN-FTEDVKISENILKQV 649

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
             A++   I N     +  +               E D+  ++  S + +EI +   +  
Sbjct: 650 --AEVYKKIRNTFRFMLGNLSDFTPEESLVYDELEEIDKWAINRFSILAKEIIDAYNSYK 707

Query: 410 IHRALAQVISLVS--EVDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAF 465
            ++    +    +      Y D  K   L    P   +  +      +++  L  L+   
Sbjct: 708 FNKIYRLIYDYCATELSSIYLDILKD-TLYCEAPNSKKRKSAQTAIYKILYGLTTLIAPI 766

Query: 466 VPKLANKIFDILFVADENRCF 486
           +   A +I+  +   ++   F
Sbjct: 767 LSFTAEEIYSYIPGREKESVF 787



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  +     Y N   HIGHA   I+ D++ +   + G    F  G D HG  I +A   
Sbjct: 51  RKFVLHDGPPYANGHIHIGHALNKILKDIVVKSKSMQGYQTPFVPGWDCHGLPIERAVFQ 110

Query: 65  AGVTTKVFVD--QNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTCRIL 109
                K  VD     +  R+ A + ++I  ++FIR            T + ++       
Sbjct: 111 KLKKRKDEVDPIDVRKKCREYATNWVNIQREEFIRLGVIGDWKNPYITMDPKYQADIVRE 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             K  ++G +++     ++         + E+  
Sbjct: 171 LGKFYERGLVHRAKKPVYWCPNCVTALAEAEIEY 204


>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 932

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDIL 477
              +    L  LL   +P  A +I+  L
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFL 770



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R+    L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 930

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 514 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 567

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 568 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 626

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 627 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 680

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 681 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 740

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDIL 477
              +    L  LL   +P  A +I+  L
Sbjct: 741 VFYQTAVALTKLLTPIIPHTAEEIWSFL 768



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 102

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R+    L ++ D      T +  +     
Sbjct: 103 LANKGVKRKEMSMAEYLEKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQV 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 163 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 198


>gi|297835664|ref|XP_002885714.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331554|gb|EFH61973.1| hypothetical protein ARALYDRAFT_319227 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1036

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 125/384 (32%), Gaps = 58/384 (15%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
           +  P Q+  E   +             +  H           + +    +      ++R 
Sbjct: 469 EFIPKQYSAEWRRWLESICDWCISRQLWWGHRIPAWYATLEEDHLKETGAYNDHWVVARN 528

Query: 213 TFDWG------------IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
             D              +++  DP  ++  W  +    L+  G+ D  +  KA F+P  +
Sbjct: 529 EEDAQKEAAQKFSGKKLLELSQDPD-VLDTWFSSGLFPLSVLGWPDETEDFKA-FYPTSV 586

Query: 261 HVIGKDILRFHAIYWPAFLLS---ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
              G DIL F         +     ++P  K           G K+SKSLGN IDP+EVI
Sbjct: 587 LETGHDILFFWVARMVMLGMKVGGGDVPFRKVFLHPMIRDAHGRKMSKSLGNGIDPLEVI 646

Query: 318 EEVGVDALRYFL-----------VREIACGKD------------------------GFYD 342
             V +  L   L           V +    KD                           +
Sbjct: 647 NGVTLAGLHARLEEGNLDPKELVVAKEGQVKDFPNGIPECGADSLRFALVSYTAQSDKIN 706

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
            D L+        N + N V  ++  +   Y        PGA   S + ILSV +  + +
Sbjct: 707 MDVLRVVGYRQWCNKLWNAVRFAMMKLGDGYTPPSQALSPGAMPFSCQWILSVLNTAISK 766

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             ++++   +  A   V +       D + +A KP      NP R      + V  +   
Sbjct: 767 TVDSLKAFELSDAANTVYAWWQYQFCDVFIEAVKP-YFSAENPGRTHAQDALWV-CLETG 824

Query: 459 AILLQAFVPKLANKIFDILFVADE 482
             LL  F+P +  +++  L    +
Sbjct: 825 LRLLHPFMPFVTEELWQRLPSPQD 848



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             + +  I           HIGHA    + D L R+ R+ G + L+  G D  G      
Sbjct: 102 SSKPQFVIVLPPPNVTGALHIGHALTCAVQDTLIRWKRMSGFNALWVPGFDHAGIATQVV 161

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                         + +  S   +     +  S D      T ++  
Sbjct: 162 VEKHLSRETGLTRHDFGREEFLNHVWQWTESKSGTIKSQLRRMGSSLDWSRECFTMDEHR 221

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++  +G IY+      +        +  EV  
Sbjct: 222 SKAVTEAFVRLHKEGLIYRDLRLVHWDCFLSTAISKREVEH 262


>gi|110804093|ref|YP_687613.1| isoleucyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110613641|gb|ABF02308.1| isoleucine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 922

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 425 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 484

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 485 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHFSVVDVRPEFAGHA---- 539

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 540 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 598

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 599 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 651

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 652 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 711

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 712 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 771



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 30  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 90  VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 150 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 209

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 210 FAVSNVNGPISLVIWTTTPWTLPANR 235


>gi|315126084|ref|YP_004068087.1| isoleucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014598|gb|ADT67936.1| isoleucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 942

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 103/288 (35%), Gaps = 18/288 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     Q  + VW D+   +             +    PADL++ G D     F +    
Sbjct: 529 KQYMKVQDTLDVWFDSGVTHACVVD------AREDLVGPADLYLEGSDQHRGWFMSSMMT 582

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  ++ + P  + +     +   G K+SKSLGNVI P  V+ ++G D LR ++       
Sbjct: 583 SVAINGHAPYKQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVASTDYTA 642

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVC 394
           +      +  K+   AD    I N  SR +   L  +D            E D+ I+   
Sbjct: 643 EMTV-SDEIFKRS--ADRYRRIRNT-SRYLLANLSGFDPKTDQVAVDDMVELDKWIVGRA 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRASTVLYVT 451
           +++  +I     +  +     ++++         Y D  K  +   K++     +     
Sbjct: 699 AQLQDDILAAYDSYQMLLVTQKLMNFCTGELGSFYLDVIKDRQYTAKSDSHARRSCQTAL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD-QRLKPGFM 498
             +   +   +   +   A +I++ L     +  F S   + L+    
Sbjct: 759 YHIAEAMTRWMAPIMSFTAQEIWEALPGERSDYVFTSTWYEGLQAPTT 806



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GH+   I+ D++ +   L   D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGDIHLGHSVNKILKDIIVKSKTLSDFDAPYVPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T         
Sbjct: 106 VEKKVGKPGVKVTAAEFREKCRAYAKKQVEGQKVDFKRLGVFGDWDKPYLTMNFDFEANA 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +I   G ++KG     +     +   + EV  
Sbjct: 166 IRVLGRIIKNGHLHKGAKPVHWCTDCGSALAEAEVEY 202


>gi|303250523|ref|ZP_07336720.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307251565|ref|ZP_07533472.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650511|gb|EFL80670.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306861029|gb|EFM93035.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 125/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQYI--- 227
           ++          + +P+     NE        L+ L    K  +  GI+   D   +   
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517

Query: 228 --------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+       D+++ G D     F 
Sbjct: 518 GEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----TDMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +        +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVGCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHIAEALVRWMAPILSFTADEIWSYL 779



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +D+   T         
Sbjct: 106 VEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|268325101|emb|CBH38689.1| valyl-tRNA synthetase [uncultured archaeon]
          Length = 810

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 78/450 (17%), Positives = 150/450 (33%), Gaps = 26/450 (5%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                ++ + +  DEHG+   +A + AG+  K      S    D+ +   +     I T 
Sbjct: 279 WWKTHNLPWISVIDEHGRMKEEAGKYAGMRIKKA---RSAIVADLDEQGLLKGKKEI-TH 334

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C    + I  K    K           + + +                 N V+
Sbjct: 335 TVNVHERCGTAVEYIMTKQWFIKY------LDLKDRFLDASAELNWYPPYMKARYDNWVK 388

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            ++ +    R   Y      +Y    +F +  + ++  +        D     K    G 
Sbjct: 389 GLKWDWCISRQRYYGIPFPVWYCEECDFEVIADDKDLPVDPT----ADAPPIAKCPKCGC 444

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP-- 276
           +     + ++  W  +       T + ++      K +P  L   G DI+ F        
Sbjct: 445 ERFKPEKDVLDTWATSSLTPQIATKWKEDDAF-FNKIYPMSLRSNGHDIITFWLFNTVVK 503

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
             L    +P    + +   +  K  K+SKS GNVI P  VIE    DALR++       G
Sbjct: 504 GLLHENQIPWKDVIINGFVLDPKKAKMSKSKGNVIQPQGVIERYSADALRFW-ACSAKLG 562

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
           +D  Y++  +  R    + N + N  S+   + L+ Y+            D+ +LS  +R
Sbjct: 563 EDLPYEEKEI--RRGVKIVNKLWN-ASKFALLHLEGYNLN--NECELELMDKWLLSKLNR 617

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS-TVLYVTVE 453
           ++ E   +            + +       D Y +  K         + A  +  Y    
Sbjct: 618 LIGECTASFNEYEFSTVKKDMENFFWHTFCDSYLEIVKDRLYNPERGEEAKRSAQYTLYV 677

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  +  ++    P +  +I+   F   EN
Sbjct: 678 SLLAMLKMMAPIQPHITEEIYHAYFADREN 707



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 11  TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN------ 64
           T     +   HIGHA   I AD + RF R+ G ++ +  G D +G       +       
Sbjct: 41  TPPPTVSGNMHIGHAMAYIQADTIMRFQRMQGKNIFYPFGFDNNGLATELYVEKKTGKMA 100

Query: 65  AGVTTKVFVDQNSRN-------FRDMADVLDIS--YDDFIRTTEKRHHDTCRILWKKISD 115
             ++ + F++   +          +    L IS  +D   RT  K    T +  +  + +
Sbjct: 101 EEMSRQDFIELCLKESEIAAQRMLEDWKSLGISPDWDITYRTINKWSRKTSQRSFILLHN 160

Query: 116 KGDIYKGCYSGWYSLRDE 133
            G  Y+      +  +  
Sbjct: 161 NGRAYRKHEPTVWCSKCG 178


>gi|302561134|ref|ZP_07313476.1| isoleucyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302478752|gb|EFL41845.1| isoleucyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 1047

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 124/387 (32%), Gaps = 13/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L +E    +        G+Y +   N + W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLEENENTNWFPDTVKHGRYGDWLDNNIDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++         +D  L+   S  E           +   +  + +++ +      G
Sbjct: 455 SRNRYWGTPLPIWRCEDDHLTCVGSLTELTELTGSDQSGLDPHRPYIDEVTFACPQDGCG 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                 P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 RTATRVPE-VIDAWYDSGSMPFAQWGYPYKNKELFEARYPAQFICEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++     D+      P        D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSDWAPSAADPAPADRPVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++   + +    RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LHALTDQVTRALDSYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V+  +  L+    P +  +++  L V 
Sbjct: 750 VVETVTKLMAPLTPFITERVWQDLIVP 776



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +                       +  V +++  F ++   +    D  D  RT +  +
Sbjct: 100 VEKELGFSGKQDIEAYGIAEFNARCRESVTRHTDAFEELTTRMGYWADLQDPYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I  KG + +      +  R     +D E+ +G +
Sbjct: 160 IESVWWSLKEIFGKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|297517214|ref|ZP_06935600.1| isoleucyl-tRNA synthetase [Escherichia coli OP50]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             + GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVN-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|4590328|gb|AAD26531.1|AF087141_1 valyl-tRNA synthetase [Mus musculus]
 gi|4590330|gb|AAD26532.1|AF087680_1 valyl-tRNA synthetase [Mus musculus]
          Length = 1263

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 112/376 (29%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                +++   N   W      ++        +  +  + P    P  R            
Sbjct: 704  HQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAR 763

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 764  EKAAREFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 821

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 822  HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 881

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 882  QGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 941

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N     +  + K +         G  +  D  I S  +  ++   E
Sbjct: 942  ILG--YRHFCNKLWNATKFRLRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNE 999

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1000 GFQAYDFPAITTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1058

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1059 LSPFMPFVTEELFQRL 1074



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 336 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 395

Query: 67  VTT-----------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                                 +  +           L   + +D    T + +   T  
Sbjct: 396 WKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVT 455

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 489


>gi|86608501|ref|YP_477263.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557043|gb|ABD02000.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 942

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 82/436 (18%), Positives = 142/436 (32%), Gaps = 48/436 (11%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTC-RIL-----WKKISDKGDIYKGCYSGWYSLRDEA 134
           ++        YD   RT E        +       +++++ +              R  A
Sbjct: 400 KEEPYNHKYPYDW--RTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIPAIGENRITA 457

Query: 135 YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
             ++         Q       PV + EE G    L+A     +    +        +R  
Sbjct: 458 MVSERS-DWCISRQRAWGVPIPVFYDEETGEPL-LTAETLDHIKAIFAQEGSDAWWKRPV 515

Query: 195 EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           E +   K      +  +                M VW D+ +++            ++  
Sbjct: 516 EELLPEKYRHNGRTYRKG------------MDTMDVWFDSGSSWAAVAK-------AQGL 556

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
            +P DL++ G D     F +    +  ++ + P    +     +  KG+K+SKSLGNVID
Sbjct: 557 GYPVDLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKAVLTHGFVLDEKGQKMSKSLGNVID 616

Query: 313 PIEVIEE---------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           P+ +I            G D LR ++   +    D    K  L +   AD+   I N   
Sbjct: 617 PLVLINGGKDPQTDPAYGADVLRLWV-SSVDYSGDVPLGKTILGQ--MADVYRKIRNTAR 673

Query: 364 RSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
             +S +          P  A TE D  IL     V  EI E+  +   +R    + +   
Sbjct: 674 FLLSNLYDFNPTQDAVPFAALTELDRYILHRLHEVGSEIGESFASYQFYRFFQAIQNFCV 733

Query: 421 VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
           V   + Y D  K           R      V   ++  LA  +   +  LA +I+  L  
Sbjct: 734 VDLSNFYLDIAKDRLYISHAQSLRRRQCQTVLSLLLENLAKAIAPVLSHLAEEIWSHLPY 793

Query: 480 ADENRC-FQSLDQRLK 494
               R  F+    +L 
Sbjct: 794 PKPTRSVFEGGWMKLP 809



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 16/159 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
           +   +     Y N   H+G     I+ D++ ++H L G  V +  G D HG  I      
Sbjct: 47  DPFVLHDGPPYANGDIHMGTTLNKILKDIVNKYHILQGRKVRYVPGWDCHGLPIELKVLQ 106

Query: 63  -----QNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                +   +T        K +        R     L +  S+D    T    +      
Sbjct: 107 SLTPQERENLTPLQLRQKAKEYALHYVDVQRASFQRLGVWGSWDRPYLTLSPEYEAAQIE 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           ++ +++ KG IY+G     +S   +    + E+    + 
Sbjct: 167 VFGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPDNH 205


>gi|331701068|ref|YP_004398027.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128411|gb|AEB72964.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 934

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 108/281 (38%), Gaps = 17/281 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             K   +PAD+++ G D     F++    + 
Sbjct: 520 FTKENDIMDVWFDSGSSHQGVLEER------KELTYPADMYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + V     +   G K+SKSLGN I PI+VI+++G + +R ++        D
Sbjct: 574 AVSGKAPYKQVVSQGFTLDGNGHKMSKSLGNTIAPIDVIKKMGAEIVRLWVTSVDTSA-D 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSR 396
                +   K   +D    I N + R +     D+D    T         D+ +L + ++
Sbjct: 633 VRVSTENFVKV--SDSYKKIRNTM-RFLLANTSDFDPKENTVAFDDLESQDQYMLVLFNK 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVE 453
            L + R  M+         +V+  +       Y D  K      K +  +  ++  V  E
Sbjct: 690 FLADTRSYMERYDFLDWNKKVVGFITNDLSAFYLDIAKDIVYIDKQDGHKRRSMQTVMYE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           +   L  L+   +P    +I+  L   +E      + +  K
Sbjct: 750 IAVGLTKLMTPVLPHTTEEIWGFLHEPEEFVQLTDIPEPKK 790



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGDIHMGHALNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQK 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              AG   K             +  +     ++    L +S  +DD   T +        
Sbjct: 105 LTQAGYDRKKMSTNDFRKLCRDYALKQVDRQKEEFKRLGVSGDWDDPYLTLKPEFEAQEV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +G IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGAFAKRGLIYKGKKPVYWSWSSESALAEAEVEYH 201


>gi|83859980|ref|ZP_00953500.1| isoleucyl-tRNA synthetase ileS [Oceanicaulis alexandrii HTCC2633]
 gi|83852339|gb|EAP90193.1| isoleucyl-tRNA synthetase ileS [Oceanicaulis alexandrii HTCC2633]
          Length = 1055

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 126/398 (31%), Gaps = 62/398 (15%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
                  +  +      P+ +   + ++ ++S ++++++    +      P   ++ +  
Sbjct: 404 RHDTYDHNYPHCWRTDEPLIYKAVDSWYLKVSDFRERMVEL--NKEINWSPAHVKDGIFG 461

Query: 199 FVKSGLKDLSLSRKTFDWGIKIP----DDPQY---------------------------- 226
              +G +D ++SR  F WG  IP    DDP Y                            
Sbjct: 462 NWLAGAQDWNISRSRF-WGTPIPVWVSDDPNYPRVDVYGSIEELEAEFGVKVTDLHRPYI 520

Query: 227 ----------------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI- 263
                                 +  VW D+ +   +   Y           +PAD  V  
Sbjct: 521 DELTRPNPDDPTGKSTMRRVEDVFDVWFDSGSMPYSQVHYPFENKDWFEANFPADFIVEY 580

Query: 264 -GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
             +    F+ +   + +L    P    +     +    +K+SK L N  DP+E  ++ G 
Sbjct: 581 VAQTRGWFYTLMVLSTMLFDRPPFKNAICHGVVLDENRQKLSKRLRNYPDPMEFFDQYGS 640

Query: 323 DALRYFLVREIACG-KDGFYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           D +R+FL+        D    K+G     V  +    + N  S        +        
Sbjct: 641 DVMRWFLISSPVLTGGDLLVPKEGREIASVQREAIAPLLNAYSFFSLYANLEERQPQIIT 700

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKT 439
            A    D  IL+    +   +   ++   + RA  +  +    + + Y    +       
Sbjct: 701 SATDPLDRYILTKTGELANAVNAALEGYDVPRACKEATAYFDALTNWYIRRSRARFWGSE 760

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +    +        V+ +++ +L   +P    K++  L
Sbjct: 761 DEAAKNAAFDTLYTVLVKVSRILAPLLPITTEKVYKAL 798



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 23/149 (15%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-------- 64
             + N  PH GH       DV+ RF  + G  V    G D HG     +A+         
Sbjct: 65  PPFANGLPHYGHLLTGFAKDVIPRFQTMKGKRVERRFGWDTHGLPAELSAEKDLGISGRK 124

Query: 65  -------------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                        A      +  +        A  +D   D   +T +    ++    +K
Sbjct: 125 AVLEMGIDKFNAAARAGVMKYAGEWEDYVTRSARWVDFENDY--KTLDISFMESALWAFK 182

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           ++ DKG +YK      YS   E+  ++ E
Sbjct: 183 QLWDKGLVYKDYRVVPYSWAVESPLSNFE 211


>gi|16759040|ref|NP_454657.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29140590|ref|NP_803932.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|81515838|sp|Q8Z9N2|SYI_SALTI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25292997|pir||AI0507 isoleucyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501330|emb|CAD01201.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136214|gb|AAO67781.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 944

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 518

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 519 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 573

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 574 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 633

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 634 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 686

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 687 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 746

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 789



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|297285940|ref|XP_001114552.2| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial [Macaca
           mulatta]
          Length = 922

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 81/220 (36%), Gaps = 24/220 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ V+   G D  G     A
Sbjct: 79  KSKPKYYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENA 138

Query: 62  AQNAGVTTKVFVDQNSRNFR-DMADVLDISYDDF--------------------IRTTEK 100
           A    +  + +  ++    +    +  ++ +D F                    I T   
Sbjct: 139 AIERNLHPESWTQRHWLIGKTAEGNAFNLLFDFFGGLPKDSYQLVLSHSLWADEITTCLP 198

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            ++   + L+ K+ + G  Y+      +   D+    +++V +        A+   V+  
Sbjct: 199 DYYKWTQYLFVKLYEAGLAYQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAK---VEQK 255

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
               +F + +AY   +       PE+      +   I   
Sbjct: 256 YLRQWFIKTTAYAKAMQDALADLPEWYGIKGMQAHWIGDC 295



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 107/326 (32%), Gaps = 63/326 (19%)

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGK 265
           ++ S        K   D              Y          + + A +W P DL++ GK
Sbjct: 521 VNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNSHSPFNTAVADYWMPVDLYIGGK 580

Query: 266 DILRFHAIYWPAFLLSAN--------LPLPK----------------------------- 288
           +    H  Y   F    +         P  K                             
Sbjct: 581 EHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQGEEVDLTG 640

Query: 289 KVFSHGFILHK----GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
            V  H     K     EK+SKS  N +DP EV+E+ G+D +R +++      KD  +D  
Sbjct: 641 SVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPDKDILWD-- 698

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC----SRVLQE 400
            +K      +      L + +   I     G  P P   ++ +++         + ++ +
Sbjct: 699 -VKTDALPGVLRWQQRLWALTTRFIEARASGKAPQPQLLSDKEKAEARKLWEYKNSIISQ 757

Query: 401 IRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
           +  +  ++  ++ A++Q++ L S +     A +   L     + A          +  L 
Sbjct: 758 VTTHFTEDFSLNSAISQLMGLSSALS---QASQRVILHSPEFEDA----------LCALM 804

Query: 460 ILLQAFVPKLANKIFDILFVADENRC 485
           ++     P + ++I+  L +     C
Sbjct: 805 VMAAPMAPHITSEIWAGLALVPRKLC 830


>gi|82542642|ref|YP_406589.1| isoleucyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123560617|sp|Q326J7|SYI_SHIBS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81244053|gb|ABB64761.1| isoleucine tRNA synthetase [Shigella boydii Sb227]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHFSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|322513918|ref|ZP_08066995.1| isoleucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120253|gb|EFX92206.1| isoleucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 116/351 (33%), Gaps = 42/351 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTF 214
           V+W+   G     +   ++          + +P+     NE        L+ L    K  
Sbjct: 441 VRWIPSWGEARIDTMVVNRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRV 500

Query: 215 D-WGIKIPDDPQYI-----------------MYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
           +  GI+   D   +                 + VW D+ + Y +        +G+     
Sbjct: 501 EEKGIQAWWDLDPVEVLGEEDAKNYRKVPDTLDVWFDSGSTYASVVEARPEFNGNN---- 556

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +   +   P  + +     +  KG K+SKSLGNVI P 
Sbjct: 557 -ADMYLEGSDQHRGWFMSSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPS 615

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           EV  + G D LR ++           Y  +        + A      +  +   +L + +
Sbjct: 616 EVWNKNGADILRLWVAS-------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLN 668

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +S       +I+E   N   H  + +++   S      Y
Sbjct: 669 GFDPKRDLVKPEEMIALDRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFY 728

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 729 LDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTADEIWGYL 779



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + I   +++   T         
Sbjct: 106 VEGLVGKPNEKISTAEFRQACRDYAKEQVEGQKADFMRMGILGDWENPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|297621276|ref|YP_003709413.1| Leucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376577|gb|ADI38407.1| Leucyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 855

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 72/202 (35%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     Y +    H+GH       D+LAR+ R  G +VL   G D  G    + 
Sbjct: 29  NKPKYYVLDMFPYISGAGLHVGHVLGYTATDILARYKRQLGFNVLHPMGWDSFGLPAEQH 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G       + N  NFR     L  SY  D    T E  ++   + ++ K+ +KG  
Sbjct: 89  AIRTGTHPAETTEINLANFRKQLKSLGFSYDWDREFGTHEPTYYKWTQWIFTKLFEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV +G          + V       +  +++ Y D+LL  
Sbjct: 149 YEAEMPVNWCPALGTVLANEEVEEGKS----KEGGHEVIRRPLRQWVLKITDYADRLLKD 204

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +           +   I   +
Sbjct: 205 LDLLDWPESLKRLQKNWIGRSE 226



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 100/305 (32%), Gaps = 84/305 (27%)

Query: 224 PQYIMYVWIDALTNY---LTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   Y        + +        +W P DL+V G +    H +Y   + 
Sbjct: 511 ETNTMPQWAGSCWYYLRFCDPHNHDEAWSREAENYWMPVDLYVGGVEHAVLHLLYARFWH 570

Query: 280 L------------------------------SANLPLPKKVF-----------SHGFILH 298
                                          S N  +P  +            +   +  
Sbjct: 571 KVLYDTGYVSTPEPFQSLRNQGLIVSRSFKDSGNNYVPTALVKEKDGAYFHKETGEELTS 630

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           + EK+SKS  N + P E+I E G DALR + +      K         +K  N D  NG 
Sbjct: 631 QIEKMSKSKLNGVVPDEIIAEYGADALRLYEMFMGPLDK---------EKVWNTDAVNGC 681

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESD-ESILSVCSRVLQEIRENMQNQLIHRALAQV 417
              + R                   T+ D E  L +  R++ ++ ++++    + ++A+ 
Sbjct: 682 RRFLQRF---------YDACASDKVTDIDHEDALKLGHRLVHDVSKDIEQMSFNTSVARF 732

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  ++++ +                   +V+ + ++        L  F P LA + +++L
Sbjct: 733 MEFMNDLSKL-------------EAYPRSVMKMAIQT-------LAPFAPHLAEETWEML 772

Query: 478 FVADE 482
              +E
Sbjct: 773 GFKEE 777


>gi|297489134|ref|XP_002697393.1| PREDICTED: valyl-tRNA synthetase-like, partial [Bos taurus]
 gi|296474311|gb|DAA16426.1| valyl-tRNA synthetase-like [Bos taurus]
          Length = 999

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 112/376 (29%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++    N   W      ++        +     + P    P  R            
Sbjct: 440 HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRTEAEAR 499

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 500 EKAAKEFCVSPDKISLQQDED-VLDTWFSSGLFPFSILGWPNQSE-DLSVFYPGTLLETG 557

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 558 HDILFFWVARMVMLGLKLTGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVTL 617

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L    + G+D   D + 
Sbjct: 618 QGLHDQLLNSNLDPSEVEKAKEGQKADFPTGIPECGTDALRFGLCAYTSQGRDINLDVNR 677

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +     +   G  +  D  I S  +  ++   +
Sbjct: 678 ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSEPGGRESLVDRWIRSRLTEAVRLSNQ 735

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 736 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 794

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 795 LSPFMPFVTEELFQRL 810



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 72  FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 131

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
              +                  + ++           L  S D + R   T + +     
Sbjct: 132 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 190

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 191 TEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 225


>gi|23098939|ref|NP_692405.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746457|sp|Q8ER41|SYI1_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|22777167|dbj|BAC13440.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 918

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 82/465 (17%), Positives = 149/465 (32%), Gaps = 44/465 (9%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI------- 89
           F+      +      DE G    +A    G+    F D+ ++   +  D           
Sbjct: 334 FYVSRSYGIDAFCPVDEKGVFTQEAPGFEGL----FYDEANKIITEKLDASGALLKLEFI 389

Query: 90  --SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG---WYSLRDEAYYNDDEVYKG 144
             SY    RT +          +  I D              +    +   YN     + 
Sbjct: 390 THSYPHDWRTKKPTIFRATSQWFASIKDFRVDILEEIKQVNWYPHWGETRLYNMVRDRED 449

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                  A   P+     E     ++      +S         +            K  L
Sbjct: 450 WCISRQRAWGVPIPVFYGEDGTPIITDETINHVSELFREHGSNI------WFEKEAKELL 503

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +   S  + +       D   IM VW D+ +++        N         PA++++ G
Sbjct: 504 PEGFTSEHSPNGNFAKETD---IMDVWFDSGSSHEGVLLNRQNHQR------PANVYLEG 554

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F++    +  ++   P    +     +   G K+SKSLGNVI P +V +++G 
Sbjct: 555 SDQYRGWFNSSLSTSVAVTGKAPYKAVISHGFVLDGNGRKMSKSLGNVIVPSKVQKQLGS 614

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TP 380
           D LR ++   +    D     D LK+   ++    I N   R +   L D++        
Sbjct: 615 DILRLWV-SSVDYQADVRISDDILKQ--TSESYRKIRNTF-RFLLANLADFNPNTDRVKE 670

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WEL 436
               E D  ++     VL E  +N           Q+     V     Y D  K   +  
Sbjct: 671 ENMEEVDRYMVHRLQNVLAEAHKNYNQYEFAPVFQQIHHFCSVDLSSFYLDFAKDILYIE 730

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            K +P R  ++     EV+  L  L+   +P  A ++++ +   +
Sbjct: 731 AKDHP-RRRSIQTGYYEVLTSLVKLIAPIIPHTAEEVWEYIPEPE 774



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   HIGHA   ++ D + R+  + G    +  G D HG  I  A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHIGHALNKVLKDFIVRYKSMTGYHAPYIPGWDTHGLPIETA 104

Query: 62  AQNAGVT-------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +      N R+    L +   +D+   T  K +  + 
Sbjct: 105 LTKKKKIKRKEMDIAAFRKLCEEYALGQINNQREQFKQLGVRGDWDNPYITLTKDYEASQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 IKVFGDMARKGYIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 932

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHEAVLRQRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN+I P +VI++ G D LR ++   +    D
Sbjct: 570 AINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVIKQFGADILRLWV-SSVDYEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +         +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V++EIRE              V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDIL 477
              +    L  LL   +P  A +I+  L
Sbjct: 743 VFYQTAVALTKLLTPIIPHTAEEIWSFL 770



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
             N GV  K             +        R+    L ++ D      T +  +     
Sbjct: 105 LANKGVKRKEMSMAEYLEKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|229843977|ref|ZP_04464118.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812971|gb|EEP48659.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 941

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRIERAGIQAWWDLDEKELLGADAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEDMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSFARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              P +  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAVIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|323945763|gb|EGB41810.1| isoleucyl-tRNA synthetase [Escherichia coli H120]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|323705769|ref|ZP_08117342.1| leucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534987|gb|EGB24765.1| leucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 814

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H GH Y    AD  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHAGHWYNYGPADSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    QN +        +     +D  + T    ++   + ++ ++  KG  Y+
Sbjct: 90  KTGIHPQDSTLQNIKTMERQLREMGATFDWDYEVITCLPDYYKWTQWVFLQLYKKGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V +G          + V   +   +F +++ Y ++LL+  +
Sbjct: 150 KKAPVNWCPSCKTVLANEQVVEGT----CERCGSEVTKKDLTQWFLKITDYAEELLNKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKMMQRNWIGKSD 225



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 102/279 (36%), Gaps = 31/279 (11%)

Query: 213 TFDWGIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
               G K   DP  +   +      L                  K  P D ++ G +   
Sbjct: 475 CPKCGGKALRDPDTLDTFVDSSWYFLRYPDNKNDKEPFNKELIDKMLPVDKYIGGAEHAC 534

Query: 270 FHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            H +Y             L  + P    +     +   G K+SKS GN I P E I E G
Sbjct: 535 MHLLYARFVTKALRDLGYLDFDEPFKSLIHQGIILGPDGNKMSKSRGNTISPDEYINEYG 594

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D  R +L+   A  + G ++ DG+K    +     I  LV + +       +       
Sbjct: 595 SDVFRMYLMFGFAFTEGGPWNDDGIKA--MSRFIQRIERLVDKFIE------EKGKAGKD 646

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             ++ ++ +  V +  ++ + E+ +    + A+A+++ LV+ + +Y    +   +K T  
Sbjct: 647 EISKDEKELNYVRNYAIKSVTEDAEKFQFNTAIARIMELVNALYKYDAEIE---IKNTK- 702

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                   +  E I  L  LL  F P  A ++++ L  +
Sbjct: 703 --------LYEETIADLVRLLAPFAPHFAEEMWERLGYS 733


>gi|297161295|gb|ADI11007.1| isoleucyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 1045

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 132/402 (32%), Gaps = 13/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +   +L  E    +        G+Y +  +N + W  
Sbjct: 393 PHCWRCHTALLYYAQPSWYIRTTAVKDALLRENERTNWFPESVKHGRYGDWLNNNIDWAL 452

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++          +  L+   S  E           +   +  + +++ +       
Sbjct: 453 SRNRYWGTPLPIWRCAEAHLTCVGSLAELSELTGTDQTGLDPHRPFIDEVTFTCTAEGCE 512

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
           ++    P+ ++  W D+ +      GY         K +PA       D     F+ +  
Sbjct: 513 LEAVRVPE-VIDAWYDSGSMPFAQWGYPYRNKEIFEKRYPAQFISEAIDQTRGWFYTLMA 571

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN+++PI ++++ G DA+R+F+    + 
Sbjct: 572 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILEPIPLMDQHGADAVRWFMAAGGSP 631

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
                     +++ V   L      +  +++      +      P P      D  +L  
Sbjct: 632 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSEADPAPADRPLLDRWLLGE 691

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              + +++ + ++     RA   +   V ++  ++  +      + +     T      E
Sbjct: 692 LGTLTEQMTQALEAYDTQRAGKLLSGFVDDLSNWYVRRSRRRFWQGDAAALRT----LHE 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           VI  +  LL   VP +  +++  L V       +S+     P
Sbjct: 748 VIETVTRLLAPLVPFITERVWQDLIVPVTPDAPESVHLAGWP 789



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
               N  P   H    +  DV  RF  + G  V    G D HG  +  A +         
Sbjct: 49  PPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVERKAGWDCHGLPVELAVEKELGFSGKQ 108

Query: 66  ----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V ++   F ++   +      D    T    + ++     K+I
Sbjct: 109 DIEAYGIAEFNAKCRESVGRHIDAFAELTTRMGYWTDLDGAYWTMNPEYVESVWWSLKEI 168

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +KG + +      +  R     +D E+ +G +
Sbjct: 169 FNKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 201


>gi|300715262|ref|YP_003740065.1| Isoleucyl-tRNA synthetase 1 [Erwinia billingiae Eb661]
 gi|299061098|emb|CAX58205.1| Isoleucyl-tRNA synthetase 1 [Erwinia billingiae Eb661]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 130/409 (31%), Gaps = 46/409 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+    A       +   VQW+ + G   
Sbjct: 395 HVEKLLHSYPHCWRHKTPIIFRATPQWFISMDQKGLRAQS---LKEIKGVQWIPDWGQAR 451

Query: 168 RLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             S   ++          + +P+     +  E +      L +    R     GI+   D
Sbjct: 452 IESMVANRPDWCISRQRTWGVPMSLFVHKDTEQLHPDTLELMEKVAQRVE-QDGIQAWWD 510

Query: 224 PQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                               + VW D+ +   +                P D+++ G D 
Sbjct: 511 LDASELMGADAENYVKVPDTLDVWFDSGSTSFSVVD----ARPEFDGHSP-DMYLEGSDQ 565

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D L
Sbjct: 566 HRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGGDIL 625

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TP 380
           R ++      G+      + LK+  ++         +  +   +L + +G  P      P
Sbjct: 626 RLWVASTDYSGEMAV-SDEILKRSADS------YRRIRNTARFLLANLNGFNPETDSVKP 678

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-K 437
                 D   +        +I  + +N   H  + +++   S      Y D  K  +   
Sbjct: 679 EEMVVLDRWAVGRAKAAQDDILASYENYDFHEVVQRLMQFCSVEMGSFYLDIIKDRQYTA 738

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           K +     +       +   L   +   +   A++I+  L    E   F
Sbjct: 739 KADGLARRSCQTALYYIAEALVRWMAPIMSFTADEIWGELPGKREKYVF 787



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 67/225 (29%), Gaps = 17/225 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T   +     
Sbjct: 106 VEQMIGKPGEKVTAAEFRAACREYAAEQVEGQKKDFIRLGVLGDWDRPYLTMNFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                KI   G ++KG     + +   +   + EV Y        +   N V   E    
Sbjct: 166 IRALSKIIGNGHMHKGAKPVHWCMDCRSALAEAEVEYYDKTSPSIDVMFNAVDK-EAVQA 224

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            F  +     +     +   + +P  R   +    +  L  +   
Sbjct: 225 KFGAAHVDGPISLVIWTTTPWTMPANRAISLHPEFEYELLQIEGR 269


>gi|28493352|ref|NP_787513.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|48428542|sp|Q83GC6|SYL_TROWT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28476393|gb|AAO44482.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 806

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 6/200 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E  + Y+    +YP+   H+GHA      D +AR+ R  G +VL   G D  G     A
Sbjct: 42  SETPRKYVLDMFSYPSGDLHMGHAETYAYGDFIARYWRHRGYNVLHPVGWDSFGLPAENA 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   KV+  +N         +   S+D    + T++  ++   + L+ K+   G  
Sbjct: 102 AIKHGSDPKVWTYRNIDQQARSMRLYAASFDWSRRLHTSDPEYYRWNQWLFLKLYKHGLA 161

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V      +   A    V   +   +F R++AY D+LL  
Sbjct: 162 YRKKAWVNWDPSDRTVLANEQVLPDGTSERSGA---LVVKKKLTQWFLRITAYADRLLDD 218

Query: 180 YESHPEFILPIERRNEVISF 199
                E   P        ++
Sbjct: 219 LSM-LENNWPERVITMQRNW 237



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 100/287 (34%), Gaps = 40/287 (13%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PAD 259
           L  +         G     D    M  + D+      YL            KAK W P D
Sbjct: 463 LGGIHDWVNLHKAGSLFRRDTD-TMDTFFDSSWYFLRYLNPDCDTAPFTLEKAKKWGPVD 521

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            +  G +    H +Y             +    P   ++ + G ++  G K+SKS GN++
Sbjct: 522 QYCGGVEHAVLHLLYARFITKFLYDIGFVDFKEPFL-RLINQGMVVLNGAKMSKSKGNIV 580

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           +  + + + GVD +R+ L+      +D  +    +          G    +SR +    +
Sbjct: 581 EFSKEVSQHGVDVIRFALIFSGPPEEDIDWKDVSMT---------GAARFLSRCIQTAKE 631

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
               +       +  D  +      +L +I   + +   +   A+++ L++        +
Sbjct: 632 ----VPKRTADLSLGDIELRKHTHSLLNDIDWLVDSYRFNVIAARLMDLLN-----ITRK 682

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K   +   NP           E I  +AI L  F P  A ++++IL 
Sbjct: 683 KIQTIGADNPA--------IREAIETIAIALDMFSPYTAEEMWEILG 721


>gi|13540863|ref|NP_110551.1| valyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74576260|sp|Q97CR9|SYV_THEVO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14324246|dbj|BAB59174.1| tRNA synthetase Val [Thermoplasma volcanium GSS1]
          Length = 790

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 131/386 (33%), Gaps = 25/386 (6%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                  +        +  + +    ++ K         +  P         +     + 
Sbjct: 330 HSVNTHERCGTPVEIFIEKQWFIRYLDLKKDFIDSGRAVKWIPDYMRTRYENWVNGLKWD 389

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS-------LSRKTFDWGIKIPDDPQY 226
             +         F  P+   ++  + V +  KDL         S++    G       + 
Sbjct: 390 WCISRQRYYGVPF--PVWYCSDCGNTVFADDKDLPVDPRLQPPSKRCDKCGSSNLVPERD 447

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANL 284
           +M  W  +               G   K++P DL   G DI+ F A      + +    +
Sbjct: 448 VMDTWATSSLTPRIALS----HFGLFDKYYPEDLRGQGHDIISFWAFTTIARSKIHDNTI 503

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + S       GEK+SKS GN++D   + ++ G DALR++    ++ G+D    + 
Sbjct: 504 PWLTLMISGNVFDMYGEKMSKSKGNIVDIYAITDKYGADALRFW-ASTVSQGEDIRVKEQ 562

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
              +     +     N +      IL++   +          +  IL+  S+V++ + ++
Sbjct: 563 DFVRGRRTVIKMYNANRLID----ILRNGRPLKNVDEPKHPVNLWILTEESKVVKLVTDS 618

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVL---YVTVEVIRQLA 459
           M N  + +A + +         D Y +  K         +   TV    Y   +V+R + 
Sbjct: 619 MDNYEVSKARSALDVFFWNTFCDNYLEMIKAIVQAANEKNDLGTVDETIYTASKVMRDVV 678

Query: 460 ILLQAFVPKLANKIFDILFVADENRC 485
            +    +P +  +I+  + +  + + 
Sbjct: 679 KMYAPIMPFITEEIYQSIEIEGKKKS 704



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            EREK++ I T     + + H+GH++     D +AR+ R+ G  V F  G D++G    +
Sbjct: 27  SEREKVFTIDTPPPTVSGKMHMGHSFSYSHIDFIARYKRMRGYHVFFPWGFDDNGLATER 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDM---------------ADVLDIS--YDDFIRTTEKRHH 103
             +    T     D N  +F ++                  + +S  + D+  T+     
Sbjct: 87  YVEKE--TGIKPTDGNVEHFINLCREFSQASEKALIEGWKRMGMSCYFKDYYVTSSPESV 144

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
              + ++  +  K  +Y+           +
Sbjct: 145 KISQSMFLDLVKKNRVYRDLAPTIRCPTCK 174


>gi|331671544|ref|ZP_08372342.1| isoleucine--tRNA ligase [Escherichia coli TA280]
 gi|331071389|gb|EGI42746.1| isoleucine--tRNA ligase [Escherichia coli TA280]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|254037441|ref|ZP_04871518.1| isoleucyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840547|gb|EEH72549.1| isoleucyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|168333320|ref|ZP_02691604.1| leucine--tRNA ligase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 798

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +E  Y      YP+    H+GH    +++DV +R+  L+   +L   G D  G      
Sbjct: 27  SKENYYCLDMFPYPSGNGLHVGHWRGYVLSDVWSRYQILNNKYILHPMGWDAFGLPAENY 86

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   +   +N +NF+   + +   YD    + TT+   +   + ++ K+ + G  
Sbjct: 87  AIAKKMHPAIATAENVKNFKRQLEEIGAIYDWEKEVNTTDPEFYKWTQWIFLKMFENGLA 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +    +    ++EV +G          + V       +  +++AY  +LL  
Sbjct: 147 YEKEMPINWCPSCKTGLANEEVKEG----LCERCSSVVTKKNLRQWMLKITAYASRLLED 202

Query: 180 YESHPEFILPIERRNEVI 197
            E+        + + + I
Sbjct: 203 LENLDWPEKVKKMQADWI 220



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 95/255 (37%), Gaps = 44/255 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y       +       K W P D++V G +    H +Y   +         +   
Sbjct: 498 WYFLRYTDPHNKKELISKKAMKDWLPVDMYVGGIEHAVLHLLYARFYTKFLQDIGVVDFK 557

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P   ++F+ G +   G K+SKS GNV+ P ++++  G D+LR + +       D  +D 
Sbjct: 558 EPFT-RLFNQGMVTKNGIKMSKSKGNVVSPDDLVKNYGCDSLRMYELFIGPPELDSEWDD 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++        N I  LVS +   I ++ D               +     +++ +I  
Sbjct: 617 RGIEGVYR--FLNKIWRLVS-TNKEIKQNTD---------------LERERHKLIYDITT 658

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            M+   ++  ++  +      +   + QK                 V  + +  L ILL 
Sbjct: 659 RMEGFSLNTVVSGFME---HTNNLLNLQK-------------QFGGVDKKTLETLVILLS 702

Query: 464 AFVPKLANKIFDILF 478
              P +A+++F++L 
Sbjct: 703 PITPHIASELFEMLG 717


>gi|301019792|ref|ZP_07183936.1| isoleucine--tRNA ligase [Escherichia coli MS 69-1]
 gi|300399079|gb|EFJ82617.1| isoleucine--tRNA ligase [Escherichia coli MS 69-1]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|293408117|ref|ZP_06651957.1| isoleucyl-tRNA synthetase [Escherichia coli B354]
 gi|291472368|gb|EFF14850.1| isoleucyl-tRNA synthetase [Escherichia coli B354]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|255326617|ref|ZP_05367694.1| valyl-tRNA synthetase [Rothia mucilaginosa ATCC 25296]
 gi|255296357|gb|EET75697.1| valyl-tRNA synthetase [Rothia mucilaginosa ATCC 25296]
          Length = 910

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 105/259 (40%), Gaps = 11/259 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLL 280
           DP  ++  W  +       TG+  NPD   AK +P DL   G DI+R         A  L
Sbjct: 521 DPD-VLDTWATSSLTPQIATGWGVNPD-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           ++++P      S   +    +K+SKS GNV+ P EV+E+ G DA+RY+       G D  
Sbjct: 579 ASSVPWYNTALSGWILDPDRKKMSKSKGNVVVPNEVLEKYGSDAVRYW-AASARLGADTA 637

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG---AFTESDESILSVCSRV 397
           YD+  +K  +   LA  + N     +++   +   +             D S+L+  + +
Sbjct: 638 YDEGQMK--IGRRLAIKLLNASKFVLNLGATEKSVITSQAQGRVLINALDRSLLARLAYL 695

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++E     +     RAL    S      D + +  K            ++VL      + 
Sbjct: 696 IEEATAAFEKYEYARALQICESFFWSFTDDFVELIKDRAYGARGEQEQASVLAALATTLD 755

Query: 457 QLAILLQAFVPKLANKIFD 475
            L  L   F+P +  +I+ 
Sbjct: 756 ALLRLFAPFLPFVTEEIWS 774



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 16/138 (11%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREQVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMTGKNVFYPLGWDDNGLPTER 104

Query: 61  AAQNA---GVTTKVFVDQNSRN------------FRDMADVLDISYDDFIRTTEKRHHDT 105
             QN         V  + + R+             R  A    IS ++FI   E+   + 
Sbjct: 105 RVQNYYGVLCDPSVADNDSFRDLITWKADGTPKPDRSQAKWPRISRNNFIELCEELAVED 164

Query: 106 CRILWKKISDKGDIYKGC 123
            ++     +  G      
Sbjct: 165 EKVFENLFTTLGLSVDWS 182


>gi|213427309|ref|ZP_03360059.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 931

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 386 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 445

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 446 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 505

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 506 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 560

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 561 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 620

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 621 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 673

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 674 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 733

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 734 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 776



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 33  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 92

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 93  VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 130


>gi|78187490|ref|YP_375533.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123757168|sp|Q3B2E1|SYL_PELLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78167392|gb|ABB24490.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 805

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 11/219 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +E+ K Y+     YP+    H+GH      +D++AR+ R  G +VL   G D  G    +
Sbjct: 28  QEKPKYYVLDMFPYPSGSGLHVGHLEGYTASDIVARYRRSRGNNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N R+FR+    +  SYD    I TT+  +    + ++ K+ + G 
Sbjct: 88  YAIKTGTHPSLTTENNIRSFRETLQAMGFSYDWSREINTTDPGYFRWTQWIFLKLYEMGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ--DKL 176
            Y+      + +   A   ++EV +        A+   V       +  +++AY     L
Sbjct: 148 AYQSEVDVNWCVELRAVLANEEVEEKI------AEGLTVVRRPLRQWVLKITAYAERLLL 201

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                  PE +  ++R     S       +L   RK   
Sbjct: 202 DLDGLDWPENVKQMQRNWIGRSEGVEVDFELRCHRKMLR 240



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 128/393 (32%), Gaps = 52/393 (13%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS-AYQDKLL 177
             +           E   N          Q Y  +  PV+  E+           +   +
Sbjct: 395 FERMASWLELKKCGERKVNYRLRDWIFSRQRYWGEPIPVKHYEDGSLGTETDLPLRLPEV 454

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
             Y+       P+    E +            +     W        ++I     + L +
Sbjct: 455 EAYQPTETGESPLANIPEWLYGTDGKGAFRRETNTMPQWAGSCWYYLRFIDPRNSEHLVD 514

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKK 289
                 +++            DL++ G +    H +Y   +         +S   P  K 
Sbjct: 515 AEKEHYWMN-----------VDLYIGGAEHAVLHLLYARFWHKVLYDLKVVSTKEPFQKL 563

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
                 +   GEK+SKS GNVI    V+E+ G DA+R + +      +   ++ +G++  
Sbjct: 564 FNQGMILGEDGEKMSKSRGNVIPADHVLEKYGADAVRLYEMFLGPLEQVKPWNTNGIE-- 621

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
                  G+   ++R   ++  D +G            E +L    + ++++RE+ +   
Sbjct: 622 -------GVSRFLNRVWRLVHPDTEGPAAVLDEAAMPGE-LLRRMHKTVKKVREDTECLK 673

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + A+A+++  V++                             E I  L +LL  + P +
Sbjct: 674 FNTAIAEMMVFVND--------------------LHRTGNRNREAIETLVLLLAPYAPHI 713

Query: 470 ANKIFDILFVADEN--RCFQSLDQRLKPGFMLH 500
           + ++++ L   +      F + D  L    +L 
Sbjct: 714 SEELWEALGHPESIARAPFPTFDPALAANDVLT 746


>gi|330925340|ref|XP_003301011.1| hypothetical protein PTT_12410 [Pyrenophora teres f. teres 0-1]
 gi|311324574|gb|EFQ90883.1| hypothetical protein PTT_12410 [Pyrenophora teres f. teres 0-1]
          Length = 1079

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 98/272 (36%), Gaps = 11/272 (4%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G  +      +   W ++ +    +  Y         K +P D    G D     F+ + 
Sbjct: 511 GKGVLRRTNEVFDCWFESGSMPYASAHYPFENVEQFEKSFPGDFIAEGLDQTRGWFYTLT 570

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L   LP    V +   +   G+K+SK L N  DP  ++   G DALR +L+    
Sbjct: 571 VLGTHLFGKLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMNSYGSDALRLYLINSPV 630

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSR-----SVSMILKDYDGMIPTPGAFTES--- 386
              +    K+   K + + +   + N         ++   + D D +       T +   
Sbjct: 631 VRAETLRFKEAGVKEIVSKVLLPLWNSYQFFEQQVTLLKKVADLDFVFDPAAGKTNANVL 690

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRAS 445
           D  IL+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   +   
Sbjct: 691 DRWILASCQSLLKFVNEEMAAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGEHGLEDTK 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             L    EV+  L   L  F P + + I+  L
Sbjct: 751 HALNTLFEVLYTLCRGLAPFTPFITDNIYLRL 782



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKQPYTFYDGPPFATGMPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   D L   I +D+  +T +   
Sbjct: 90  IDKELGMSGRDAVREIGIAKYNEKCRAIVMRYATEWRATIDRLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            +T   ++K++ DKG +Y+
Sbjct: 150 METEWWVFKRLFDKGAVYR 168


>gi|256025343|ref|ZP_05439208.1| isoleucyl-tRNA synthetase [Escherichia sp. 4_1_40B]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|188492266|ref|ZP_02999536.1| isoleucyl-tRNA synthetase [Escherichia coli 53638]
 gi|194439692|ref|ZP_03071762.1| isoleucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|188487465|gb|EDU62568.1| isoleucyl-tRNA synthetase [Escherichia coli 53638]
 gi|194421377|gb|EDX37394.1| isoleucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|323959973|gb|EGB55619.1| isoleucyl-tRNA synthetase [Escherichia coli H489]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             + GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVN-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|157159493|ref|YP_001456811.1| isoleucyl-tRNA synthetase [Escherichia coli HS]
 gi|166980056|sp|A7ZVX4|SYI_ECOHS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157065173|gb|ABV04428.1| isoleucyl-tRNA synthetase [Escherichia coli HS]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSLSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|253774942|ref|YP_003037773.1| isoleucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160152|ref|YP_003043260.1| isoleucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300928679|ref|ZP_07144198.1| isoleucine--tRNA ligase [Escherichia coli MS 187-1]
 gi|242375866|emb|CAQ30546.1| isoleucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325986|gb|ACT30588.1| isoleucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972053|gb|ACT37724.1| isoleucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976262|gb|ACT41932.1| isoleucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300463348|gb|EFK26841.1| isoleucine--tRNA ligase [Escherichia coli MS 187-1]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             + GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVN-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|218703286|ref|YP_002410805.1| isoleucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403099|ref|ZP_06647196.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298378626|ref|ZP_06988510.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300896789|ref|ZP_07115293.1| isoleucine--tRNA ligase [Escherichia coli MS 198-1]
 gi|331661390|ref|ZP_08362314.1| isoleucine--tRNA ligase [Escherichia coli TA143]
 gi|254782400|sp|B7N7Q0|SYI_ECOLU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218430383|emb|CAR11250.1| isoleucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|291430014|gb|EFF03028.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298280960|gb|EFI22461.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300359379|gb|EFJ75249.1| isoleucine--tRNA ligase [Escherichia coli MS 198-1]
 gi|331061305|gb|EGI33268.1| isoleucine--tRNA ligase [Escherichia coli TA143]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|197302144|ref|ZP_03167204.1| hypothetical protein RUMLAC_00871 [Ruminococcus lactaris ATCC
           29176]
 gi|197298831|gb|EDY33371.1| hypothetical protein RUMLAC_00871 [Ruminococcus lactaris ATCC
           29176]
          Length = 831

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 56  KKQKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAENY 115

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV        N  N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 116 AIKMGVHPAKSTAANVANIKRQINDIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 175

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y D+LL+ 
Sbjct: 176 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGAEVTKKNLRQWMLRITKYADRLLND 231

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 232 LDKLDWPEKVKKMQADWI 249



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 97/237 (40%), Gaps = 40/237 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            +  P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 550 DEMLPVDMYIGGVEHAVLHLLYSRFYTKFLYDIGAIDFDEPFHKLFNQGMITGKNGIKMS 609

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G+         +G+   + R
Sbjct: 610 KSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKR 660

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             +M+++  +  I          + ++ +  R++ +I   +++  ++  ++  +      
Sbjct: 661 LWNMLMESKEKDIQPT-------KEMIKLRHRMVYDITTRLESFSLNTVISGFMEYN--- 710

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +  K    K+   D+         E +  +A+LL  F P  A ++++ L   D
Sbjct: 711 NKFIEVAK----KEGGIDK---------ETLETIAVLLSPFAPHFAEEMWEQLGHVD 754


>gi|170021615|ref|YP_001726569.1| isoleucyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|189082323|sp|B1IRE9|SYI_ECOLC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169756543|gb|ACA79242.1| isoleucyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 938

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             + GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVN-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082319|sp|A7GRM0|SYI_BACCN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 921

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 136/350 (38%), Gaps = 28/350 (8%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V +  +    ++   R+       G  
Sbjct: 448 DWCISRQRAWGVPIPVFYAENNDPIITDETINHVANLFREHGSNVWFEREAKDLLPEGFT 507

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                  PADL++ G D     F
Sbjct: 508 HPSSPNGEFRKETDIMDVWFDSGSSHQAVLEER------DDLQRPADLYLEGSDQYRGWF 561

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 562 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 620

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDE 388
             +    D     D LK+   A++   I N   R +   L D++            E D 
Sbjct: 621 SSVDYQSDVRISDDILKQV--AEVYRKIRNTF-RFLLGNLADFNPAQDAVAKAELREVDR 677

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRAS 445
            +L   + ++ +++E  +          + +   +     Y D  K    ++  N     
Sbjct: 678 YMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAANHHDRR 737

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
            +  V  +V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 738 AIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEESVQLTDMPEAIE 787



 Score = 84.1 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K             +  +     R+    L +   +D    T E  +     
Sbjct: 105 LTNKGVKRKEMPVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDHPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 KVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEIEY 200


>gi|227432378|ref|ZP_03914370.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351899|gb|EEJ42133.1| leucyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 808

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+EK Y+     YP+ Q  H+GH       D+++R+ R  G +VL   G D  G    +
Sbjct: 28  SEKEKYYVMDMFPYPSGQGLHVGHPEGYTATDIMSRYKRAKGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F ++N + F++  + L  S D    I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIKTGNNPAGFTNKNVQVFKNQINSLGFSIDWSREINTTDPEYYKWSQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWY---SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      +            ++EV  G           PV     + +  R++AY D+
Sbjct: 148 AYEDEIMVNWAPDFPGGGIVVANEEVIDGKT----ERGGYPVYRKPMKQWVLRITAYADR 203

Query: 176 LLSYYESHPE 185
           LL   E    
Sbjct: 204 LLEDLEDLDW 213



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 106/285 (37%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K K+W   DL+V G +    H +Y   +         +   
Sbjct: 502 WYFLRYVDPHNSEALADPEKLKYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 561

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P E++   G D LR + +      +   + +
Sbjct: 562 EPFQKLVNQGMILGENHEKMSKSKGNVVNPDEIVNNYGADTLRVYEMFMGPLTQSKPWSE 621

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           DG+               + R   +++ + D +        + D  +  +  + ++++ E
Sbjct: 622 DGVSGS---------RRWLDRVWRLLVDEEDKLRDHVTTVNKGD--LDKIYHQTVKKVSE 670

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  V+E  +                       + V+ +     +L 
Sbjct: 671 DLENMRFNTAISQLMVFVNEAYK--------------------SEALPVQYMDGFVQMLA 710

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              P LA +++  L   +E+  + S         ++  + + IF 
Sbjct: 711 PIAPHLAEELWSKLG-HEEDISYVSWPTY-DESQLVEDSVEIIFQ 753


>gi|123295742|emb|CAM26113.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1182

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++    N  +W      ++        +     + P    P  R            
Sbjct: 623 HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 682

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 683 EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 740

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 741 HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 800

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L   ++ G+D   D + 
Sbjct: 801 QGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNR 860

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 861 ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 918

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 919 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 977

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 978 LSPFMPFVTEELFQRL 993



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 255 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 314

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 315 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 374

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 375 EAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 408


>gi|323964878|gb|EGB60345.1| isoleucyl-tRNA synthetase [Escherichia coli M863]
 gi|323975807|gb|EGB70903.1| isoleucyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324112587|gb|EGC06564.1| isoleucyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|327254999|gb|EGE66602.1| isoleucyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|322709888|gb|EFZ01463.1| isoleucyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 1071

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 71/443 (16%), Positives = 147/443 (33%), Gaps = 32/443 (7%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRHHDTC 106
           D+ G    K    AG+  K       ++ +    ++  S     Y    R+     +   
Sbjct: 349 DDTGHFTEKVPDFAGMHVKQADKLIIKHLKAADRLVVESQLRHSYPMCPRSDTPLIYRAV 408

Query: 107 RILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              +    + I D     +G +     +++  + +     +  +         P+     
Sbjct: 409 PSWFIRIPEVIPDMLKNIEGSHWVPSFVKERRFASWIANARDWNVGRNRYWGTPIPLWVS 468

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           +    R+     + L     +   +  + R       + S +   +L R           
Sbjct: 469 DDLEERVCIGSIEELRELSGYQGKLTDLHRDKVDHITIPSKMGKGTLRRV---------- 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +    +  Y         K +P D    G D     F+ +      L
Sbjct: 519 --DEVFDCWFESGSMPYASQHYPFENVEKFQKSFPGDFIAEGLDQTRGWFYTLLVLGTHL 576

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    V +   +   G+K+SK L N  DP  V+++ G DALR +L+       +  
Sbjct: 577 FGCSPFQNCVVNGIVLAEDGKKMSKRLKNYPDPSIVMDKYGSDALRLYLINSPVVRAEPL 636

Query: 340 FYDKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMI-PTPGAFTE--SDESILS 392
            + + G+K+ V   L     +        ++    +  D M  P   +  E   D  IL+
Sbjct: 637 RFKESGVKEVVQKVLLPLWNSFKFFEGQTALLRKAEGVDYMWNPDMESKNENVMDRWILA 696

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVT 451
            C  +L+ + E M+   ++  + +++ L+    + Y    +     +         L   
Sbjct: 697 SCQSLLEFVNEEMRGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGENGLQDTQHALNAL 756

Query: 452 VEVIRQLAILLQAFVPKLANKIF 474
            EV+  L   L  F P L++ I+
Sbjct: 757 FEVLYTLCRGLAPFTPFLSDTIY 779



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 19/146 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             R          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  SGRPHYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGLPIEHE 89

Query: 62  -----------------AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R   + L   I +D+  +T + + 
Sbjct: 90  IDKKLGISGKAAVTKFGIEKYNEECRAIVMRYASEWRLTIERLGRWIDFDNDYKTMDPKF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWY 128
            ++   ++K++ +KG +Y+G     Y
Sbjct: 150 MESLWWVFKQLFEKGQVYQGHRVMPY 175


>gi|291280849|ref|YP_003497667.1| Isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|290760722|gb|ADD54683.1| Isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320658152|gb|EFX25881.1| isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663461|gb|EFX30745.1| isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|168464423|ref|ZP_02698326.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195632670|gb|EDX51124.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 956

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|205351389|ref|YP_002225190.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855562|ref|YP_002242213.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|84029565|sp|Q57TL5|SYI_SALCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782430|sp|B5R1N6|SYI_SALEP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782431|sp|B5RF43|SYI_SALG2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|205271170|emb|CAR35957.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707365|emb|CAR31637.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 944

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 518

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 519 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 573

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 574 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 633

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 634 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 686

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 687 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 746

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 789



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|51246404|ref|YP_066288.1| isoleucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826763|sp|Q6AK45|SYI_DESPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50877441|emb|CAG37281.1| probable isoleucyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 939

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/281 (20%), Positives = 102/281 (36%), Gaps = 17/281 (6%)

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              G       + I+ VW D+ ++      +    +       PADL++ G D     F 
Sbjct: 518 CTCGCATFIKEEDILDVWFDSGSS------FAAVCELRDDLVAPADLYLEGSDQHRGWFQ 571

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    A       P    +     +  +G+K+SKS+GNV+ P EVI+E G + LR ++  
Sbjct: 572 SSLITATGTRGYAPFKGVLTHGYVVDGQGKKMSKSVGNVVAPQEVIDEYGAEILRLWVSS 631

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDES 389
           E     D    K+ LK+   +D    I N +   +   L D+D           +E D  
Sbjct: 632 EDY-RDDVKVSKEILKQV--SDSYRKIRNTIRYFLG-NLNDFDPSKDRIAVSEMSELDRW 687

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPW-ELKKTNPDRAST 446
            L+    +  +I E+      H     +           Y D  K    ++ T+      
Sbjct: 688 ALARFEELRAKITESYDKYEFHAINQSLNYFCGTTMSAFYLDIIKDRLYVEGTDSTIRRA 747

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
              V  +++  L  L+   +   A   ++ L+   E    +
Sbjct: 748 SQTVLYDILDGLLRLMSPVLSFTAADAWNALYSLGEKDSLE 788



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 48/170 (28%), Gaps = 12/170 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R    +     Y N   H+GHA+  I+ D++ R  R  G +  +  G D HG  I   
Sbjct: 45  QDRPLFVLHDGPPYANGHIHLGHAFNKILKDIILRSKRASGFNAPYVPGWDCHGLPIEHN 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   K                 +     +I+T +         +     D      
Sbjct: 105 VDKELGEEKKKTIPILAKRAACRKYAN----KWIKTQKPEFKRL--GVLGDWEDPYLTIN 158

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN------PVQWMEEEGY 165
             Y    +     +     V +     Y+ +          V++ +    
Sbjct: 159 YSYEAAIAREFNKFLLSGSVVRNRKPVYWCSTCTTALAEAEVEYHDHTSP 208


>gi|300924028|ref|ZP_07140028.1| isoleucine--tRNA ligase [Escherichia coli MS 182-1]
 gi|300419752|gb|EFK03063.1| isoleucine--tRNA ligase [Escherichia coli MS 182-1]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKVF--VDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEIFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|213852257|ref|ZP_03381789.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 903

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 358 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 417

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 418 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 477

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 478 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 532

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 533 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 592

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 593 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 645

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 646 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 705

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 706 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 748



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 5   KAKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 64

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 65  VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 102


>gi|213646630|ref|ZP_03376683.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|289826107|ref|ZP_06545219.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 956

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|16763436|ref|NP_459051.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|81524015|sp|Q8ZRZ0|SYI_SALTY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16418541|gb|AAL19010.1| isoleucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|261245280|emb|CBG23065.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267991707|gb|ACY86592.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
          Length = 944

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 518

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 519 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 573

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 574 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 633

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 634 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 686

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 687 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 746

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 789



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|326428367|gb|EGD73937.1| isoleucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 1193

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 93/264 (35%), Gaps = 15/264 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y         + +PAD    G D     F+ +      L    
Sbjct: 635 VFDCWFESGSMPYAQQHYPFEHKEDFEQNFPADFIAEGIDQTRGWFYTLLVIGTCLFDKA 694

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G K+SK L N  DP  V+ E G DALR +L+   A   ++  +++
Sbjct: 695 PWKNLIVNGLVLASDGRKMSKRLKNYPDPNLVLHEDGADALRLYLITSPAVRAENLRFER 754

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP---------GAFTESDESILSVC 394
            G++  +       +     R               P              +D  IL+  
Sbjct: 755 KGVQGLIREVFLPWLNAF--RFFEQQADRLKASSGQPFLFDDTAKCNTDNPTDRWILAFV 812

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ I   MQ   ++  + +++  V  + + Y    +         + A+  L+   E
Sbjct: 813 QELLEFIHAEMQAYRLYTVVPRLLKFVDNLTNWYVRLNRKRLKGAEGDEDAAIALWALGE 872

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  +A  +  F P  A  ++  +
Sbjct: 873 VLMTMAKFMAPFTPFFAEWMYQHM 896



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 19/136 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK        +    PH GH     I DV+ R+  + G  V    G D HG  +      
Sbjct: 148 EKFVFFDGPPFATGLPHYGHLLAGTIKDVVTRYAHMRGYHVPRRFGWDCHGLPVEYEIDK 207

Query: 65  A-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                                 +  V + S  +R     L   I +D+  +T      ++
Sbjct: 208 EYGIKGPDDVMKMGIATYNDACRAIVMRYSEEWRRTVSRLGRWIDFDNDYKTMYPWFMES 267

Query: 106 CRILWKKISDKGDIYK 121
              ++K+I DK  +Y+
Sbjct: 268 VWYVFKQIFDKNLVYR 283


>gi|313607791|gb|EFR83990.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 611

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 110/285 (38%), Gaps = 30/285 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 206 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 259

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 260 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 318

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  A       E D+ +L  
Sbjct: 319 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFHPTTNAVSYENLREVDKYMLIK 372

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            + +++ ++++ +         Q+ +   V     Y D  K     +     +     TV
Sbjct: 373 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 432

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
            Y   E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 433 FY---EAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPE 474


>gi|331090374|ref|ZP_08339255.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330401121|gb|EGG80714.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 810

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 35  KKQKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAENY 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 95  AIKMGVHPAKSTAENVANIKRQINEIAALYDWDMEVNTTDPNFYKWTQWIFVKMFKEGLA 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 155 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGAEVTKKNLRQWMLKITAYADRLLND 210

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 211 LDKLDWPEKVKKMQADWI 228



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 62/360 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            +      +G   L+   
Sbjct: 420 FKLRDWVFSRQRYWGEPIPIIHCPDCGNVPVPEEELPLTLPDVDSYEPTGTGESPLAGIE 479

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
           +  +    +   P       M  W    +++          D          +  P D++
Sbjct: 480 EWVNCTCPVCGKPAKRETNTMPQWA--GSSWYFLRYVDSKNDKELVSREKADEMLPVDMY 537

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G K+SKS GNV+ P
Sbjct: 538 IGGVEHAVLHLLYSRFYTKFLYDIGVVDFDEPFHKLFNQGMITGKNGIKMSKSKGNVVSP 597

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++ + G D+LR + +       D  +D  G+         +G+   + R  ++++   
Sbjct: 598 DALVNDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKRLWNLLMD-- 646

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                +  A  +  + ++ +  +++ +I   +++  ++  ++  +      +++ +  K 
Sbjct: 647 -----SKEADVQPTKEMIKLRHKMVYDITNRLESFSLNTVISGFMEYN---NKFIEMAK- 697

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
              K+   D+         E +  +A+LL  F P  A ++++ L   +      + S D+
Sbjct: 698 ---KEGGIDK---------ETLETIAVLLSPFAPHFAEEMWEQLGHGETIFKAGWPSYDE 745


>gi|301330211|ref|ZP_07222871.1| isoleucine--tRNA ligase [Escherichia coli MS 78-1]
 gi|300843773|gb|EFK71533.1| isoleucine--tRNA ligase [Escherichia coli MS 78-1]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|293417901|ref|ZP_06660523.1| isoleucyl-tRNA synthetase [Escherichia coli B185]
 gi|291430619|gb|EFF03617.1| isoleucyl-tRNA synthetase [Escherichia coli B185]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|171778693|ref|ZP_02919789.1| hypothetical protein STRINF_00641 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282650|gb|EDT48074.1| hypothetical protein STRINF_00641 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 932

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 103/270 (38%), Gaps = 17/270 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSS------WNGVMNAREGLEYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G + LR ++        D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWVASVDT-DAD 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +      + +            D+ I    ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTTDF---NPNEDAVACEDLRSVDKYITVKFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVE 453
           ++  IR+  ++         V++   V     Y D  K     +   +     +  V  +
Sbjct: 688 LVATIRKAYEDYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEAADNIARRQMQTVFYD 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++ ++  LL   +P  A +I+  L    E 
Sbjct: 748 ILVKITKLLTPILPHTAEEIWSYLEFEPEE 777



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFNLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFCAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYVTLIPAYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|16128020|ref|NP_414567.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74310644|ref|YP_309063.1| isoleucyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89106910|ref|AP_000690.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170079689|ref|YP_001729009.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|191168893|ref|ZP_03030664.1| isoleucyl-tRNA synthetase [Escherichia coli B7A]
 gi|193066215|ref|ZP_03047268.1| isoleucyl-tRNA synthetase [Escherichia coli E22]
 gi|193070965|ref|ZP_03051894.1| isoleucyl-tRNA synthetase [Escherichia coli E110019]
 gi|209917215|ref|YP_002291299.1| isoleucyl-tRNA synthetase [Escherichia coli SE11]
 gi|218552610|ref|YP_002385523.1| isoleucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218693497|ref|YP_002401164.1| isoleucyl-tRNA synthetase [Escherichia coli 55989]
 gi|238899431|ref|YP_002925227.1| isoleucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|256020134|ref|ZP_05433999.1| isoleucyl-tRNA synthetase [Shigella sp. D9]
 gi|260842263|ref|YP_003220041.1| isoleucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|293476688|ref|ZP_06665096.1| isoleucyl-tRNA synthetase [Escherichia coli B088]
 gi|300816058|ref|ZP_07096281.1| isoleucine--tRNA ligase [Escherichia coli MS 107-1]
 gi|300905426|ref|ZP_07123193.1| isoleucine--tRNA ligase [Escherichia coli MS 84-1]
 gi|300919575|ref|ZP_07136067.1| isoleucine--tRNA ligase [Escherichia coli MS 115-1]
 gi|301303540|ref|ZP_07209663.1| isoleucine--tRNA ligase [Escherichia coli MS 124-1]
 gi|307311521|ref|ZP_07591163.1| isoleucyl-tRNA synthetase [Escherichia coli W]
 gi|309797791|ref|ZP_07692175.1| isoleucine--tRNA ligase [Escherichia coli MS 145-7]
 gi|312970118|ref|ZP_07784300.1| isoleucyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331666258|ref|ZP_08367139.1| isoleucine--tRNA ligase [Escherichia coli TA271]
 gi|331680594|ref|ZP_08381253.1| isoleucine--tRNA ligase [Escherichia coli H591]
 gi|2507434|sp|P00956|SYI_ECOLI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84029566|sp|Q3Z5Y4|SYI_SHISS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782394|sp|B7L4E8|SYI_ECO55 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782398|sp|B7M0C2|SYI_ECO8A RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782399|sp|B1XBF1|SYI_ECODH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782401|sp|B6HZ21|SYI_ECOSE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511502|sp|C4ZPV2|SYI_ECOBW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2367096|gb|AAC73137.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|73854121|gb|AAZ86828.1| isoleucine tRNA synthetase [Shigella sonnei Ss046]
 gi|85674290|dbj|BAB96595.2| isoleucyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887524|gb|ACB01231.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|190901059|gb|EDV60837.1| isoleucyl-tRNA synthetase [Escherichia coli B7A]
 gi|192926140|gb|EDV80781.1| isoleucyl-tRNA synthetase [Escherichia coli E22]
 gi|192955695|gb|EDV86169.1| isoleucyl-tRNA synthetase [Escherichia coli E110019]
 gi|209910474|dbj|BAG75548.1| isoleucyl-tRNA synthase [Escherichia coli SE11]
 gi|218350229|emb|CAU95912.1| isoleucyl-tRNA synthetase [Escherichia coli 55989]
 gi|218359378|emb|CAQ96917.1| isoleucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|238861564|gb|ACR63562.1| isoleucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|257757410|dbj|BAI28907.1| isoleucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260450765|gb|ACX41187.1| isoleucyl-tRNA synthetase [Escherichia coli DH1]
 gi|291321141|gb|EFE60583.1| isoleucyl-tRNA synthetase [Escherichia coli B088]
 gi|300402704|gb|EFJ86242.1| isoleucine--tRNA ligase [Escherichia coli MS 84-1]
 gi|300413321|gb|EFJ96631.1| isoleucine--tRNA ligase [Escherichia coli MS 115-1]
 gi|300531265|gb|EFK52327.1| isoleucine--tRNA ligase [Escherichia coli MS 107-1]
 gi|300841267|gb|EFK69027.1| isoleucine--tRNA ligase [Escherichia coli MS 124-1]
 gi|306908500|gb|EFN38998.1| isoleucyl-tRNA synthetase [Escherichia coli W]
 gi|308118620|gb|EFO55882.1| isoleucine--tRNA ligase [Escherichia coli MS 145-7]
 gi|310337616|gb|EFQ02727.1| isoleucyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315059251|gb|ADT73578.1| isoleucyl-tRNA synthetase [Escherichia coli W]
 gi|315134720|dbj|BAJ41879.1| isoleucyl-tRNA synthetase [Escherichia coli DH1]
 gi|315255702|gb|EFU35670.1| isoleucine--tRNA ligase [Escherichia coli MS 85-1]
 gi|323160058|gb|EFZ46021.1| isoleucyl-tRNA synthetase [Escherichia coli E128010]
 gi|323171444|gb|EFZ57091.1| isoleucyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323181720|gb|EFZ67133.1| isoleucyl-tRNA synthetase [Escherichia coli 1357]
 gi|323380192|gb|ADX52460.1| isoleucyl-tRNA synthetase [Escherichia coli KO11]
 gi|324017709|gb|EGB86928.1| isoleucine--tRNA ligase [Escherichia coli MS 117-3]
 gi|331066469|gb|EGI38346.1| isoleucine--tRNA ligase [Escherichia coli TA271]
 gi|331072057|gb|EGI43393.1| isoleucine--tRNA ligase [Escherichia coli H591]
 gi|332103641|gb|EGJ06987.1| isoleucyl-tRNA synthetase [Shigella sp. D9]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|320179583|gb|EFW54532.1| Isoleucyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332095311|gb|EGJ00334.1| isoleucyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|301156678|emb|CBW16148.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 944

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 518

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 519 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 573

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 574 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 633

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 634 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 686

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 687 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 746

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 789



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|168820987|ref|ZP_02832987.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205342514|gb|EDZ29278.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320089078|emb|CBY98834.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 956

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDAAQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|91784973|ref|YP_560179.1| isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168144|sp|Q13UW2|SYI_BURXL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91688927|gb|ABE32127.1| Isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 945

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 20/285 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   +++ + +  +I  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHARPVEDWLEIDRYAVALSANLQNDILS 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  T  D  +          +   L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRAAQTALYHIAHGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE---NRCFQSLDQRLKPGFMLHK 501
            L+  F+   A + + I     E      + +     + G +L K
Sbjct: 781 RLMAPFLSFTAEEAWKIFEPNSETIFTETYHAFPAVPEAGALLDK 825



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGDWDNPYKTMNFTNEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|319937141|ref|ZP_08011548.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807507|gb|EFW04100.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 910

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 75/461 (16%), Positives = 150/461 (32%), Gaps = 35/461 (7%)

Query: 49  TGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
              D HG+ +    +        +VD  ++      D L +       T           
Sbjct: 345 CNVDAHGKMMEDCGEWLAG---QYVDDANKTVTMKLDELGVLLKLEFITHS------YPH 395

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            W+            +        E   ++ +     +   +   +N ++   +     +
Sbjct: 396 DWRTKKPIIFRATDQWFCSIDKIREKLLSEIDKVNWLNEWGHVRIYNMIRDRGDWCISRQ 455

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF--DWGIKIPDDPQY 226
            S      + Y E     +      +    F + G        + F    G      P  
Sbjct: 456 RSWGVPIPIIYCEDGTPIMEKEVFEHISHLFREYGSNVWFEKDENFLLPEGYTNEHSPNG 515

Query: 227 I-------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           I       M VW D+ +++             +   +P DL+  G D     F++     
Sbjct: 516 IFRKEKDIMDVWFDSGSSHTGVMK-------ERGYPYPVDLYFEGSDQYRGWFNSSLIIG 568

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                  P    +     +  KG K+SKSLGN +DPI+++ + G D LR +    IA   
Sbjct: 569 TAAHGCAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKMVNQYGADILRLW-ATSIAYQS 627

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D     + +K+   A+    + N +   +  +       +         D+ +L   +++
Sbjct: 628 DVRISDEIMKQV--AENYRKMRNTMRFVLGNLSDFKSCDVVETSKLEGVDQYMLVELNQL 685

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
           ++  +E +       A   +++  +      Y D  K    ++K +  R   V  V    
Sbjct: 686 VKGYKEALNQYDFSEANQLILNCFTNTLSAFYMDFTKDILYIEKADGLRRRQVQTVLYHY 745

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            + +  LL   +   A ++ D  F  DEN+  +S+    KP
Sbjct: 746 AKTMMKLLSPVLVFTAEELHDH-FHCDENKA-ESVFLEPKP 784



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++         Y N   HIGH    +I DV+ R+  ++G    F  G D HG  I  A
Sbjct: 45  EGKDTFVFHDGPPYANGNMHIGHMMNKVIKDVICRYKNMEGFYTPFIPGWDTHGLPIENA 104

Query: 62  AQN-----AGVTTKVFVDQNSRN-----FRDMADVLDI----SYDDFIRTTEKRHHDTCR 107
            Q        +TT  F ++          + M   + +     Y     T          
Sbjct: 105 IQKLGVNRKAMTTAEFREKCREYALEQVHKQMEQCIRVGTFADYKHPYLTLMPEFEANQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K++ +G IYKG    ++S   E+   + EV   
Sbjct: 165 DVFAKMAMEGLIYKGLKPVYWSPSSESALAEAEVEYH 201


>gi|315304010|ref|ZP_07874447.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
 gi|313627619|gb|EFR96315.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
          Length = 921

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 110/282 (39%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI+++G D +R ++        D
Sbjct: 570 AVTGESPYRNVLSHGFALDGEGRKMSKSLGNTILPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  +       E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFEPTTDSVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     + T+      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEATDSPNRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYESVVTLTKLLAPILPHTTEEVWNSLNSEGAESIHLQDLPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  GRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L IS D      T    +      
Sbjct: 106 AKKGVKRKEMSVAEFRKLCAEYAMTQVEGQRTGFKRLGISGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|300821972|ref|ZP_07102116.1| isoleucine--tRNA ligase [Escherichia coli MS 119-7]
 gi|300525572|gb|EFK46641.1| isoleucine--tRNA ligase [Escherichia coli MS 119-7]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPEKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|301048404|ref|ZP_07195431.1| isoleucine--tRNA ligase [Escherichia coli MS 185-1]
 gi|300299697|gb|EFJ56082.1| isoleucine--tRNA ligase [Escherichia coli MS 185-1]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|170684022|ref|YP_001742141.1| isoleucyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218698446|ref|YP_002406075.1| isoleucyl-tRNA synthetase [Escherichia coli IAI39]
 gi|254782396|sp|B7NHD0|SYI_ECO7I RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782402|sp|B1LFV6|SYI_ECOSM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|170521740|gb|ACB19918.1| isoleucyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218368432|emb|CAR16168.1| isoleucyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|149639182|ref|XP_001512705.1| PREDICTED: similar to isoleucine-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 1182

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 96/276 (34%), Gaps = 11/276 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   A  L    
Sbjct: 427 VFDCWFESGSMPYAQVHYPFEKRKEFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGKP 486

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP+ VI   G DALR +L+       ++  + +
Sbjct: 487 PFKNVIVNGLVLASDGQKMSKRKKNYPDPVSVIVSYGADALRLYLINSPVVRAENLRFKE 546

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           +G++  +   L    N    L+   + +  ++    +       ES    D  ILS    
Sbjct: 547 EGVRDVLKDVLLPWYNAYRFLIQNVLRLHKEEEREFLYNENTVKESSNITDRWILSFVQS 606

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++   +  M    ++  + +++  V    + Y    +     +   +     L     V+
Sbjct: 607 LIGFFQTEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGIEDCVMALETLFSVL 666

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +  L+  + P L   ++  L    E    +  D 
Sbjct: 667 FSMCRLMAPYTPFLTELMYQNLKTLIEPASIREKDT 702


>gi|149199960|ref|ZP_01876987.1| valyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149136935|gb|EDM25361.1| valyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 913

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 133/390 (34%), Gaps = 67/390 (17%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
           +     PV+++  + +F ++  ++++LL+          P         +V++   D ++
Sbjct: 343 HERCGTPVEYLPTKQWFIKVVEHKEELLAQ--GEKVNWFPSFMGKRYRDWVENLGWDWAI 400

Query: 210 SRKT-FDWGIKIPDDPQY-----------------------------------IMYVWID 233
           SR+  F   I +   P                                     ++  W  
Sbjct: 401 SRQRYFGVPIPVWYAPDGTVVPASPEQLPVNPLVDKPLDCKGYDPETLIPESDVLDTWAT 460

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVF 291
           + +     + + +       +  P  +     DI+R  A Y    ++    ++P    V 
Sbjct: 461 SSSTPELNSRWGEED--ELPQIRPMSMRPQAHDIIRTWAFYTIVKSYFHFNDVPWKDAVI 518

Query: 292 SHGFILHKGE---------------KISKSL-GNVIDPIEVIEEVGVDALRYFLVREIAC 335
           S   I    +               KISKS  G+   P+ +I   G D +RY+       
Sbjct: 519 SGHVIKKDQQVEAQKVEGKAFARKSKISKSKDGDRFSPLAMIANHGADQIRYW-ASSGTL 577

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G D  +D+D ++    + L   + N  +R     L+++D   P P   T  D+ +L+   
Sbjct: 578 GTDIAFDEDEIEGS--SKLLTKLWNS-TRFAEGFLENFDASAPMPT-LTAVDKWVLTRFD 633

Query: 396 RVLQEIRENMQNQLI---HRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            V++   +  +         AL Q        D Y +  K       + + A    +   
Sbjct: 634 EVIKAYHKAFEKYEFFPARNALEQFF-WSDFCDNYIEMVKHRLYGDESAEDAKAARWTLY 692

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++   +  L   ++P +  +I+  +F   E
Sbjct: 693 KIQLGIIKLFAPYMPHICEEIYQDVFRERE 722



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 61/166 (36%), Gaps = 15/166 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E   I T     + + HIGH +    A+++AR+ R+ G +V++  G D++G      
Sbjct: 32  SDKETFSIDTPPPTVSGKLHIGHVFSYTQAEIVARYQRMLGKNVMYPFGFDDNGLPTEIL 91

Query: 62  AQNAG-------------VTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +                   +   ++    F+D+   L  S  ++    T  ++     
Sbjct: 92  TEREKGIKGSQMPRAEFVKNCEEVSEKYRAQFKDLWQSLGFSCAWESAYSTISEKSQRIS 151

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           +  +  + ++  +        +  + +  +   EV     G  +N 
Sbjct: 152 QRSFLDLLERDKVKYNQSPTLWCTKCQTSFAQAEVDDVNKGTIFNY 197


>gi|82775428|ref|YP_401775.1| isoleucyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123563562|sp|Q32K71|SYI_SHIDS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81239576|gb|ABB60286.1| isoleucine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAIDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|157154999|ref|YP_001461194.1| isoleucyl-tRNA synthetase [Escherichia coli E24377A]
 gi|218547459|ref|YP_002381250.1| isoleucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|260853236|ref|YP_003227127.1| isoleucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|166980055|sp|A7ZHB5|SYI_ECO24 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782404|sp|B7LVN2|SYI_ESCF3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157077029|gb|ABV16737.1| isoleucyl-tRNA synthetase [Escherichia coli E24377A]
 gi|218355000|emb|CAQ87606.1| isoleucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|257751885|dbj|BAI23387.1| isoleucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|320200458|gb|EFW75044.1| Isoleucyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323157918|gb|EFZ44021.1| isoleucyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 938

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|323955220|gb|EGB50993.1| isoleucyl-tRNA synthetase [Escherichia coli H263]
          Length = 894

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFLAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|311113761|ref|YP_003984983.1| valyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
 gi|310945255|gb|ADP41549.1| valyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
          Length = 910

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 11/259 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLL 280
           DP  ++  W  +       TG+  +P+   AK +P DL   G DI+R         A  L
Sbjct: 521 DPD-VLDTWATSSLTPQIATGWATDPE-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           ++++P      S   +    +K+SKS GNV+ P +V+++ G DA+RY+       G D  
Sbjct: 579 ASSVPWYNTALSGWILDPDRKKMSKSKGNVVVPHDVLDKYGSDAVRYW-AASARLGADTA 637

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTES-DESILSVCSRV 397
           YD+  +K  +   LA  + N     +++    K            T + D S+L   + +
Sbjct: 638 YDEGQMK--IGRRLAIKLLNASKFVLNLGATEKSVITSQSQGQVLTNALDRSLLVRLAYL 695

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++E     +     RAL    S      D + +  K            ++VL      + 
Sbjct: 696 IEEATAAFEKYEYARALQIAESFFWSFTDDFVELIKDRAYGARGETEQASVLAALATTLD 755

Query: 457 QLAILLQAFVPKLANKIFD 475
            L  L   F+P +  +I+ 
Sbjct: 756 ALLRLFAPFLPFVTEEIWS 774



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE +Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREHVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMSGKNVFYPLGWDDNGLPTER 104

Query: 61  AAQNA---GVTTKVFVDQNSRN------------FRDMADVLDISYDDFIRTTEKRHHDT 105
             QN         V  + + R              R  A    IS ++FI   E+   + 
Sbjct: 105 RVQNYYGVLCDPSVPDNPDFRQLIPLKADGSPKPDRSQAKWPRISRNNFIELCEELAVED 164

Query: 106 CRILWKKISDKGDIYKGCYS 125
            ++     +  G      ++
Sbjct: 165 EKVFEHLFTTLGLSVDWSHT 184


>gi|289641290|ref|ZP_06473456.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
           Datisca glomerata]
 gi|289508888|gb|EFD29821.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
           Datisca glomerata]
          Length = 879

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 13/256 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           DP  +M  W  +        G+  + D   A+ +P DL     +I+     +    +   
Sbjct: 531 DPD-VMDTWATSSLTPQIAAGWGSDDD-LFARVFPMDLRPQAHEIIRTWLFSTVLRSHAE 588

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP      S   +    +K+SKS GNV+ P++++E+ G DA+RY+       G D  
Sbjct: 589 FGTLPWTNTAISGWILDPDRKKMSKSKGNVVTPLDLLEQHGSDAVRYWAASGRP-GTDTT 647

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D   +K  +   LA  + N    ++ +       +          D ++L+  + V+  
Sbjct: 648 FDVGQMK--IGRRLAIKLLNASRFALGL-----GAVEDAGTVGEPLDRALLATLAEVVDS 700

Query: 401 IRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               + N    RAL    S      D Y +  K           A++        +  + 
Sbjct: 701 ASTALDNYDYTRALELTESFFWRFCDDYVELVKGRAYGSFGEPGAASARATLAIALSTVL 760

Query: 460 ILLQAFVPKLANKIFD 475
            L   F+P +  +++ 
Sbjct: 761 ALFAPFLPFVTEEVWS 776



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R ++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    + 
Sbjct: 59  DRARVYAIDTPPPTVSGSLHVGHVFSYTHTDVIARYQRMRGREVFYPMGFDDNGLPTERR 118

Query: 62  AQN 64
            QN
Sbjct: 119 VQN 121


>gi|215485187|ref|YP_002327618.1| isoleucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312966145|ref|ZP_07780371.1| isoleucyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|254782392|sp|B7UI71|SYI_ECO27 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|215263259|emb|CAS07574.1| isoleucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312289388|gb|EFR17282.1| isoleucyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|168182204|ref|ZP_02616868.1| leucine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793505|ref|YP_002861057.1| leucyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674582|gb|EDT86543.1| leucine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263012|gb|ACQ54045.1| leucine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 813

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + ++ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMETQLKAMGAMFNWENEVITCSPDYYKWTQWVFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 90/263 (34%), Gaps = 27/263 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L       G          K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNNNGKDAFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIREFGSDVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  D +K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDAIKS------IGRFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ I E++     + ++A+++   + + +Y            +  + S+      E I  
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNAISKYL---------GNDTIKNSS---FLKEGIID 709

Query: 458 LAILLQAFVPKLANKIFDILFVA 480
              LL  F P  A + ++++ + 
Sbjct: 710 FIRLLAPFAPHFAEEQWELIGIN 732


>gi|91209083|ref|YP_539069.1| isoleucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117622315|ref|YP_851228.1| isoleucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218556963|ref|YP_002389876.1| isoleucyl-tRNA synthetase [Escherichia coli S88]
 gi|237704165|ref|ZP_04534646.1| isoleucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|123266167|sp|Q1RGH6|SYI_ECOUT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200206|sp|A1A774|SYI_ECOK1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782393|sp|B7MAE6|SYI_ECO45 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91070657|gb|ABE05538.1| isoleucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115511439|gb|ABI99513.1| isoleucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218363732|emb|CAR01392.1| isoleucyl-tRNA synthetase [Escherichia coli S88]
 gi|226902077|gb|EEH88336.1| isoleucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294493800|gb|ADE92556.1| isoleucyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307629597|gb|ADN73901.1| isoleucyl-tRNA synthetase [Escherichia coli UM146]
 gi|315285014|gb|EFU44459.1| isoleucine--tRNA ligase [Escherichia coli MS 110-3]
 gi|323950486|gb|EGB46364.1| isoleucyl-tRNA synthetase [Escherichia coli H252]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFLAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|309787320|ref|ZP_07681932.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924898|gb|EFP70393.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 922

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 425 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 484

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 485 EVD-GIQAWWDLDAKELLGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 539

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 540 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 598

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 599 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 651

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 652 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 711

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 712 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 771



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 30  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 90  VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 150 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAIDQDALKAK 209

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 210 FAVSNVNGPISLVIWTTTPWTLPANR 235


>gi|331645129|ref|ZP_08346240.1| isoleucine--tRNA ligase [Escherichia coli M605]
 gi|330909872|gb|EGH38382.1| isoleucyl-tRNA synthetase [Escherichia coli AA86]
 gi|331045886|gb|EGI18005.1| isoleucine--tRNA ligase [Escherichia coli M605]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDDADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|256847547|ref|ZP_05552993.1| leucyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256716211|gb|EEU31186.1| leucyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 806

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 9/204 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y      YP+ Q  H+GH       DV+AR  R+ G +VL   G D  G    + 
Sbjct: 29  SKKKYYALDMFPYPSGQGLHVGHPEGYTATDVMARMKRMQGFNVLHPMGFDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K F ++N  +FRD    L  SY  D  + TT+ +++   + +++++  KG  
Sbjct: 89  ALKTGHNPKGFTNKNIDHFRDQIQSLGFSYDWDREVNTTDPKYYKWTQWIFEQLYKKGLA 148

Query: 120 YKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
           Y+      +           ++EV  G           PV     + +  +++AY D+L+
Sbjct: 149 YEDEIMVNWAPDFMGGTVVANEEVEDGKT----KRGGYPVYRKPMKQWVLKITAYADRLI 204

Query: 178 SYYESHPEFILPIERRNEVISFVK 201
              +         E +   I   +
Sbjct: 205 DDLDLVDWPESVKEMQRNWIGRSE 228



 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 140/414 (33%), Gaps = 61/414 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            + R ++         K++ + GD+ K  Y+G     +  + +    DD   K  D    
Sbjct: 344 HDDRDYEFAHKFNLPIKQVIEGGDLEKAAYTGDGKHINSGFLDGLNIDDAKQKMVDWLTE 403

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           +         +   + F    Y  + +            +      +    +   + S +
Sbjct: 404 HHAGQKKVNYKLRDWIFSRQRYWGEPIPVIHWDDGTTSLVPEDELPLELPDTDNIEPSGT 463

Query: 211 RKTFDWGIKIPDD-----------PQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            ++    IK   +               M  W         Y                +W
Sbjct: 464 GESPLAKIKDWVNVYDENGRHGLRETNTMPQWAGSSWYWLRYTDPHNDQALASKEALDYW 523

Query: 257 -PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +              P  K V     +    EK+SKS 
Sbjct: 524 SPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFMKLVNQGMILGSNHEKMSKSK 583

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P E++++ G D LR + +      +   +D  GL         +G    V R   
Sbjct: 584 GNVVNPDEIVDQYGADTLRLYEMFMGPLTESVPWDPKGL---------HGANKWVHRVWR 634

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +I+ D + +       T +D  +  V ++ ++++ E+ +    + A++Q++  V+E  + 
Sbjct: 635 LIMDDNNHLRDRIS--TINDGKLDKVYNQTVKKVTEDYERMHFNTAISQLMVFVNEAYK- 691

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                              V  + VE I+    ++   +P +A +++     +D
Sbjct: 692 -------------------VDDLPVEYIKGFIKMIAPIMPHMAEELWSQFNESD 726


>gi|256852656|ref|ZP_05558027.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300859774|ref|ZP_07105862.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|256712001|gb|EEU27038.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300850592|gb|EFK78341.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 926

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 516 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 570 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 629 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 775



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 105 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|116873095|ref|YP_849876.1| leucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461123|sp|A0AJB5|SYL_LISW6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116741973|emb|CAK21097.1| leucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 803

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 95/258 (36%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPKNTEAIADKEKLIEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 557 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRMYEMFMGPLDASIAWNE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   + +   +  I      T ++ ++      +++ +  
Sbjct: 617 NGLE---------GARKFLDRIWRLFV--TEEGILAEKVTTTANANLEKAYHHMVKTVTN 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E              K +         +  E +     LL 
Sbjct: 666 HYENLRFNTGISQLMIFINEA------------YKQD--------SIPKEYVEGFVQLLS 705

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 706 PIAPHLAEELWEILGHTE 723


>gi|26245947|ref|NP_751986.1| isoleucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218687900|ref|YP_002396112.1| isoleucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227885080|ref|ZP_04002885.1| isoleucyl-tRNA synthetase [Escherichia coli 83972]
 gi|300980955|ref|ZP_07175269.1| isoleucine--tRNA ligase [Escherichia coli MS 45-1]
 gi|331661061|ref|ZP_08361993.1| isoleucine--tRNA ligase [Escherichia coli TA206]
 gi|81478576|sp|Q8FLB7|SYI_ECOL6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782397|sp|B7MNN1|SYI_ECO81 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|26106344|gb|AAN78530.1|AE016755_30 Isoleucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218425464|emb|CAR06246.1| isoleucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222031857|emb|CAP74595.1| Isoleucyl-tRNA synthetase [Escherichia coli LF82]
 gi|227837909|gb|EEJ48375.1| isoleucyl-tRNA synthetase [Escherichia coli 83972]
 gi|281177237|dbj|BAI53567.1| isoleucyl-tRNA synthetase [Escherichia coli SE15]
 gi|300409112|gb|EFJ92650.1| isoleucine--tRNA ligase [Escherichia coli MS 45-1]
 gi|307551867|gb|ADN44642.1| isoleucyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|312944629|gb|ADR25456.1| isoleucyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315293405|gb|EFU52757.1| isoleucine--tRNA ligase [Escherichia coli MS 153-1]
 gi|320197533|gb|EFW72147.1| Isoleucyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323190295|gb|EFZ75571.1| isoleucyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|331052103|gb|EGI24142.1| isoleucine--tRNA ligase [Escherichia coli TA206]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|110640237|ref|YP_667965.1| isoleucyl-tRNA synthetase [Escherichia coli 536]
 gi|191174124|ref|ZP_03035638.1| isoleucyl-tRNA synthetase [Escherichia coli F11]
 gi|300984127|ref|ZP_07176878.1| isoleucine--tRNA ligase [Escherichia coli MS 200-1]
 gi|123344416|sp|Q0TLW5|SYI_ECOL5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110341829|gb|ABG68066.1| Isoleucyl-tRNA synthetase [Escherichia coli 536]
 gi|190905618|gb|EDV65243.1| isoleucyl-tRNA synthetase [Escherichia coli F11]
 gi|300306752|gb|EFJ61272.1| isoleucine--tRNA ligase [Escherichia coli MS 200-1]
 gi|315298460|gb|EFU57715.1| isoleucine--tRNA ligase [Escherichia coli MS 16-3]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|119356387|ref|YP_911031.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166231596|sp|A1BDY0|SYL_CHLPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119353736|gb|ABL64607.1| leucyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 816

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 9/203 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    +
Sbjct: 28  TDKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIVARYKRSCGYNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K   ++N  +FR+    +  SYD    I TT   +    + ++ K+ + G 
Sbjct: 88  FAIKTGTHPKNTTEKNISSFRETLQAMGFSYDWSREINTTSPDYFRWTQWIFIKLYELGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y       +    +    ++EV +     Y       V       +  +++AY ++LL 
Sbjct: 148 AYVSEVDINWCEELKTVLANEEVEEKVKEGYT------VIRKPLRQWVLKITAYAERLLD 201

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 202 DLDELDWPENVKQMQRNWIGRSE 224



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 132/376 (35%), Gaps = 48/376 (12%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            G  +   +       +     + +V        ++ Q    + +  + Y    S   + 
Sbjct: 387 DGLHFSEAFQIMAHWLETKGLGERKVTYKLRDWIFSRQRYWGEPIPVKHYE-DGSIRTES 445

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
            L       E   P E     ++ +   L     + +   +  +    PQ+    W    
Sbjct: 446 NLPLQLPEVEAYQPSETGESPLATMHDWLYG---ADEFGSFRRETNTMPQWAGSCW--YY 500

Query: 236 TNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPL 286
             ++         D +K K+W   DL++ G +    H +Y   +         +S+  P 
Sbjct: 501 LRFIDPENNAQLIDPAKEKYWMNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVSSREPF 560

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
            K       +    EK+SKS GNVI   +V+++ G DA+R + +      +   ++ +G+
Sbjct: 561 KKLFNQGMILGEDNEKMSKSRGNVIPADQVLKDYGADAVRLYEMFLGPLEQVKPWNTNGI 620

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILSVCSRVLQEIR 402
           +         GI   + +   ++  D +       A    +    E +     + ++++ 
Sbjct: 621 E---------GISRFLGKVWRLVYPDSENPDQRDQAAVLDENPLPEILQRRMHKTIKKVT 671

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           E+  +   + A+++++  V+E            L+K    + S V          L ++L
Sbjct: 672 EDTDHLKFNTAISEMMVFVNE------------LQKNGCRQKSAV--------ENLLLML 711

Query: 463 QAFVPKLANKIFDILF 478
             + P +  +++  + 
Sbjct: 712 APYAPHITAELWQAIG 727


>gi|220908492|ref|YP_002483803.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782385|sp|B8HMX3|SYI_CYAP4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219865103|gb|ACL45442.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 955

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 147/489 (30%), Gaps = 55/489 (11%)

Query: 51  TDEHGQKI-AKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL 109
           T+E GQ    K            + Q     ++ A      YD   RT +          
Sbjct: 366 TEEAGQFAGLKVLDEGNEAVIQALQQVGALLKEEAYSHKYPYDW--RTKKPVILRATEQW 423

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-----PVQWMEEEG 164
           +  +    +      +    +  +       +         + Q N     PV + EE G
Sbjct: 424 FASVEGFREAALQAIAQVQWIPAQGENRITAMVSERSDWCISRQRNWGVPIPVFYDEETG 483

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
                +     + +                E++                           
Sbjct: 484 EPLLNAETIAHVQAIVAEKGSDAWWELSIEELLPQAYRNNGRR-------------YRKG 530

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
              M VW D+ ++      +    +  +   +PA++++ G D     F +    +     
Sbjct: 531 TDTMDVWFDSGSS------WAAVLEQREQLRYPAEMYLEGSDQHRGWFQSSLLTSVATHG 584

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREI 333
             P    +     +  +G K+SKSLGNV+DP  V             G D LR ++   +
Sbjct: 585 IAPYKTVLTHGFVLDEQGRKMSKSLGNVVDPAIVIEGGKNQKEDPPYGADILRLWV-SSV 643

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTESDESIL 391
               D    K+ LK+   AD+   I N   R +   L D+D            + D  +L
Sbjct: 644 DYSSDVPLGKNILKQ--MADIYRKIRNTA-RFLLGNLHDFDPANNKVEYDRLPQLDRYML 700

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVL 448
                V  E+ E   +    R    V +   V   + Y D  K         D R  +  
Sbjct: 701 HRIVEVFTEVNEAFTSYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAPDDFRRRSCQ 760

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVAD-----ENRCFQSLDQRLK-PGFMLHKT 502
            V    +  LA  +   VP LA  I+  L             + SLD     P   L +T
Sbjct: 761 TVLWIALENLAKAIAPVVPHLAEDIWQFLPYPTPYKSVFEAGWVSLDATWTNPDPQLLET 820

Query: 503 FDPIFPRFL 511
           F+ +  R L
Sbjct: 821 FEQV--RLL 827



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           +   +     Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I      
Sbjct: 51  DPFILHDGPPYANGDLHIGHALNKILKDIINKYWMLQGRKVRYVPGWDCHGLPIELKVLQ 110

Query: 60  --KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
             K+ Q A +T        K F  Q     +       +   +D+   T +  +      
Sbjct: 111 GMKSEQRAALTPLSLRQAAKEFALQTVERQKQSFKRYGVWGEWDNPYLTLKPEYEAAQIG 170

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++  KG IY+G    ++S   +    + E+  
Sbjct: 171 VFGQMVLKGYIYRGLKPVYWSPSSQTALAEAELEY 205


>gi|167844652|ref|ZP_02470160.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|187730740|ref|YP_001878850.1| isoleucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|254782436|sp|B2U245|SYI_SHIB3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187427732|gb|ACD07006.1| isoleucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|320173364|gb|EFW48566.1| Isoleucyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186137|gb|EFW60879.1| Isoleucyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|324118377|gb|EGC12271.1| isoleucyl-tRNA synthetase [Escherichia coli E1167]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|331681407|ref|ZP_08382044.1| isoleucine--tRNA ligase [Escherichia coli H299]
 gi|331081628|gb|EGI52789.1| isoleucine--tRNA ligase [Escherichia coli H299]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|290893253|ref|ZP_06556240.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290557235|gb|EFD90762.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307571243|emb|CAR84422.1| leuS [Listeria monocytogenes L99]
          Length = 806

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 206

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 207 DLDLVDWPENIKDMQRNWIGRSE 229



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 136/414 (32%), Gaps = 61/414 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 344 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 403

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 404 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 463

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 464 GESPLANLHDWVNVTDENGRKGRRETNTMPQWAGSSWYFLRYIDPKNSEAIADKEKLAEW 523

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 524 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 583

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 584 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 634

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 635 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 691

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                             T+    VE       LL    P LA ++++IL   +
Sbjct: 692 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTE 726


>gi|194434542|ref|ZP_03066800.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417195|gb|EDX33306.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1012]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKNFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|150404041|gb|ABR68334.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404107|gb|ABR68367.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404111|gb|ABR68369.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|150404067|gb|ABR68347.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404069|gb|ABR68348.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404071|gb|ABR68349.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|150404083|gb|ABR68355.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404085|gb|ABR68356.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404091|gb|ABR68359.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404099|gb|ABR68363.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404109|gb|ABR68368.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404115|gb|ABR68371.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|29375585|ref|NP_814739.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257421252|ref|ZP_05598242.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779257|ref|ZP_06744661.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|81437154|sp|Q836V1|SYI_ENTFA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29343046|gb|AAO80809.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257163076|gb|EEU93036.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453624|gb|EFG22022.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 926

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 516 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 570 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 629 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 775



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 105 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|28572538|ref|NP_789318.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|48428543|sp|Q83HV5|SYL_TROW8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28410670|emb|CAD67056.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 806

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 6/200 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E  + Y+    +YP+   H+GHA      D +AR+ R  G +VL   G D  G     A
Sbjct: 42  SETPRKYVLDMFSYPSGDLHMGHAETYAYGDFIARYWRHRGYNVLHPVGWDSFGLPAENA 101

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   KV+  +N         +   S+D    + T++  ++   + L+ K+   G  
Sbjct: 102 AIKHGSDPKVWTYRNIDQQARSMRLYAASFDWSRRLHTSDPEYYRWNQWLFLKLYKHGLA 161

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D     +++V      +   A    V   +   +F R++AY D+LL  
Sbjct: 162 YRKKAWVNWDPSDRTVLANEQVLPDGTSERSGA---LVVKKKLTQWFLRITAYADRLLDD 218

Query: 180 YESHPEFILPIERRNEVISF 199
                E   P        ++
Sbjct: 219 LSM-LENNWPERVITMQRNW 237



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 100/287 (34%), Gaps = 40/287 (13%)

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFW-PAD 259
           L  +         G     D    M  + D+      YL            KAK W P D
Sbjct: 463 LGGIHDWVNLHKAGSLFRRDTD-TMDTFFDSSWYFLRYLNPDCDTAPFTLEKAKKWGPVD 521

Query: 260 LHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
            +  G +    H +Y             +    P   ++ + G ++  G K+SKS GN++
Sbjct: 522 QYCGGVEHAVLHLLYARFITKFLYDIGFVDFKEPFL-RLINQGMVVLNGAKMSKSKGNIV 580

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           +  + + + GVD +R+ L+      +D  +    +          G    +SR +    +
Sbjct: 581 EFSKEVSQHGVDVIRFALIFSGPPEEDIDWKDVSMT---------GAARFLSRCIQTAKE 631

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
               +       +  D  +      +L +I   + +   +   A+++ L++        +
Sbjct: 632 ----VPKRTADLSLGDIELRKHTHSLLNDIDWLVDSYRFNVIAARLMDLLN-----ITRK 682

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K   +   NP           E I  +AI L  F P  A ++++IL 
Sbjct: 683 KIQTIGADNPA--------IREAIETIAIALDMFSPYTAEEMWEILG 721


>gi|15799708|ref|NP_285720.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829283|ref|NP_308056.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168751720|ref|ZP_02776742.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168756850|ref|ZP_02781857.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168766714|ref|ZP_02791721.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776942|ref|ZP_02801949.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168781723|ref|ZP_02806730.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168785077|ref|ZP_02810084.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801907|ref|ZP_02826914.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195937699|ref|ZP_03083081.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809478|ref|ZP_03251815.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812638|ref|ZP_03253967.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208818279|ref|ZP_03258599.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209400433|ref|YP_002268632.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324466|ref|ZP_03440550.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791161|ref|YP_003075998.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226784|ref|ZP_05941065.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255187|ref|ZP_05947720.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|81765401|sp|Q8XA49|SYI_ECO57 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782395|sp|B5YYB8|SYI_ECO5E RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12512709|gb|AAG54328.1|AE005179_5 isoleucine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13359485|dbj|BAB33452.1| isoleucine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767722|gb|EDU31566.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014298|gb|EDU52420.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189000725|gb|EDU69711.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356087|gb|EDU74506.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189364054|gb|EDU82473.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189375026|gb|EDU93442.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375994|gb|EDU94410.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208729279|gb|EDZ78880.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733915|gb|EDZ82602.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738402|gb|EDZ86084.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209161833|gb|ACI39266.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209748716|gb|ACI72665.1| isoleucine tRNA synthetase [Escherichia coli]
 gi|209748718|gb|ACI72666.1| isoleucine tRNA synthetase [Escherichia coli]
 gi|209748720|gb|ACI72667.1| isoleucine tRNA synthetase [Escherichia coli]
 gi|217320687|gb|EEC29111.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254590561|gb|ACT69922.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|320190455|gb|EFW65105.1| Isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320642066|gb|EFX11417.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320647429|gb|EFX16224.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652763|gb|EFX21001.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320668773|gb|EFX35568.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326345258|gb|EGD69001.1| Isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346889|gb|EGD70623.1| Isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPDEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|332098111|gb|EGJ03084.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 922

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 425 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 484

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 485 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 539

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 540 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 598

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 599 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 651

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 652 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 711

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 712 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 771



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 30  KGKKNFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 90  VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 150 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 209

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 210 FAVSNVNGPISLVIWTTTPWTLPANR 235


>gi|323212891|gb|EFZ97693.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 903

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 358 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 417

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 418 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 477

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 478 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 532

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 533 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 592

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 593 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 645

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 646 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 705

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 706 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 748



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 5   KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 64

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 65  VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 102


>gi|300939436|ref|ZP_07154098.1| isoleucine--tRNA ligase [Escherichia coli MS 21-1]
 gi|300455657|gb|EFK19150.1| isoleucine--tRNA ligase [Escherichia coli MS 21-1]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|295113823|emb|CBL32460.1| Isoleucyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 926

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 516 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 570 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 629 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 683 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 742

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 743 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 775



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 105 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|168262289|ref|ZP_02684262.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205348764|gb|EDZ35395.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|204927037|ref|ZP_03218239.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204323702|gb|EDZ08897.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|161612367|ref|YP_001586332.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161361731|gb|ABX65499.1| hypothetical protein SPAB_00056 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|62178610|ref|YP_215027.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167550782|ref|ZP_02344539.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168243563|ref|ZP_02668495.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194447430|ref|YP_002044012.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197248475|ref|YP_002145027.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|198245825|ref|YP_002214000.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387244|ref|ZP_03213856.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|224581883|ref|YP_002635681.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62126243|gb|AAX63946.1| isoleucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194405734|gb|ACF65953.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197212178|gb|ACH49575.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197940341|gb|ACH77674.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604342|gb|EDZ02887.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205324429|gb|EDZ12268.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205337443|gb|EDZ24207.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|224466410|gb|ACN44240.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713061|gb|EFZ04632.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|326621743|gb|EGE28088.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626409|gb|EGE32752.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|70607182|ref|YP_256052.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|90108444|sp|Q4J8X1|SYV_SULAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68567830|gb|AAY80759.1| valyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 831

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 16/267 (5%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW+D+    +       +      K +P+ L + G DI+       Y+    L+ N+
Sbjct: 488 VADVWVDSSVT-VLYLTGFYDDKSRFTKTFPSSLRLQGTDIIRTWLFYTYYRTLALAGNI 546

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + + +   +   G ++SKS GNV+ P++ ++E G DA+R  L+ +   G D  +  D
Sbjct: 547 PFKEVLINGQVLGPDGTRMSKSKGNVVSPLDKVDEYGADAIRLTLL-DAKIGDDFPFKWD 605

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K +        + N    S   I K     I  P    E D+ IL    + +Q+  E 
Sbjct: 606 TVKSKKLLL--QKLWNAGRLSYPFIGKK---KINKPSKLHEIDKWILQEHKKFVQQSIEA 660

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            +N   +  +  + S   E   D Y +  K     +       + +Y    +I+ L ILL
Sbjct: 661 YRNYDFYIVVESIYSYFWETIADEYLELIKHRLFMEDE-----SAIYTLSRIIKDLLILL 715

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
               P +  ++++ L+    +   ++L
Sbjct: 716 YPIAPHITEEMYERLYGDKMSIALENL 742



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++     I T   + + + H+GHAY + I+D + RF RL+G +VL   G D  G      
Sbjct: 65  EKSPVFVIDTPPPFTSGELHMGHAYWVTISDTIGRFKRLEGYNVLLPQGWDTQGLPTELK 124

Query: 62  AQNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCR 107
            Q      K            + +   ++ R     L     ++ F  RT E ++    +
Sbjct: 125 VQYKLKVPKENRELFLKKCIEWTEDMIKSMRTAMIRLGYRAEWERFEYRTYESKYRRIIQ 184

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +   G +       ++  + E      EV  
Sbjct: 185 KSLIDMHKMGLVEMREGPVYWCPKCETALAQSEVGY 220


>gi|302841440|ref|XP_002952265.1| hypothetical protein VOLCADRAFT_81773 [Volvox carteri f.
           nagariensis]
 gi|300262530|gb|EFJ46736.1| hypothetical protein VOLCADRAFT_81773 [Volvox carteri f.
           nagariensis]
          Length = 1197

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 69/453 (15%), Positives = 135/453 (29%), Gaps = 33/453 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D +G+   +     G+  K    +     ++   ++D S     Y    R+     
Sbjct: 372 PCPVDLNGRFTEEVHLFKGLHVKDADKEIVAAIKEAGRLVDNSAITHSYPFCWRSDTPLI 431

Query: 103 HDTCRILWKKISDKGDIYKG----CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + K+    D         Y     ++++ ++N  E               P+ 
Sbjct: 432 YRAVPSWFVKVEQIKDRLLHNNTLTYWVPSYVKEKRFHNWLENAHDWAVSRSRFWGTPIP 491

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               E     +       L          L     + +    K               G 
Sbjct: 492 IWVSEDGEELVCIRSKAELEELTGEKVTDLHRHFIDHLTIPSKRP-------------GQ 538

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPA 277
                   +   W ++ +       Y           +PAD    G D  R +       
Sbjct: 539 PPLRRVDDVFDCWFESGSMPYGQLHYPFENKELFEANFPADFVAEGLDQTRGWFYTLMVL 598

Query: 278 FLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                + P  K +  +G +L   G+K+SK L N  DP EVI++ G DALR +L+      
Sbjct: 599 STALFDKPAFKHLVCNGLVLAADGKKMSKRLKNYPDPTEVIDKYGADALRLYLINSPVVR 658

Query: 337 KDG-FYDKDG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDE 388
            +   + ++G   + K V     N    LV   + + L+      P P +        D 
Sbjct: 659 AETLRFKEEGVFAVVKDVFLPWYNAYRFLVQNILRLELEAGTRFSPIPPSELRPTNVLDR 718

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTV 447
            I +    +   +   M    ++  +  ++  +    + Y    +         + A   
Sbjct: 719 WIGAASRSLTAYVTAEMGAYRLYTVVPYLVKFIDSLTNVYVRYNRKRLKGSKGEEDAKVA 778

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           L     V+  +  ++  F P L   ++  L  A
Sbjct: 779 LSCLYNVLMDVCKVMAPFTPFLTESMYQNLRGA 811



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +    PH GH     + D++ R+    G  V    G D HG  +   
Sbjct: 39  EGKPEYIFYDGPPFATGLPHYGHILAGTLKDIVTRYAAATGHHVTRRFGWDCHGLPVEYE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S+ +      L   I +++  +T +   
Sbjct: 99  IDKKLNVKSRDDVLKMGIGTYNEECRSIVMRYSKEWEKTVKRLGRWIDFENDYKTLDPSF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++ ++ +KG +Y+G     +S       ++ E
Sbjct: 159 MESVWWVFSQLYEKGLVYRGFKVMPFSTACSTPLSNFE 196


>gi|332090384|gb|EGI95482.1| isoleucyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 860

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 363 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 422

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 423 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHFSVVDVRPEFAGHA---- 477

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 478 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 536

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 537 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 589

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 590 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 649

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 650 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 709


>gi|317137866|ref|XP_001727511.2| isoleucyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 1092

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 97/275 (35%), Gaps = 13/275 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 536 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 595

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +   +   G+K+SK L N  DP  ++   G DALR +L+       +    K+
Sbjct: 596 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPSLIMNRYGSDALRLYLINSPVVRAEPLRFKE 655

Query: 345 GLKKRVNADLANGIGNLVSRSVSMIL-----KDYDGMIPTPGAFTE---SDESILSVCSR 396
              K + A +   + N        +      +  D +       T     D  IL+ C  
Sbjct: 656 AGVKEIVAKVLLPLWNSYKFFEGQVALLKKSQGVDYVFDPKAEATNTNVMDRWILASCQS 715

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 716 LLKFVNEEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRRRLKGENGVDDTLHALNTLFEVL 775

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
             L   L  F P L + I+  L   + +  R   S
Sbjct: 776 YTLVRGLAPFTPFLTDTIYQKLLPHIPEALRSEDS 810



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 22/207 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 45  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 104

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 105 IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRYASEWRETIERLGRWIDFDNDYKTMNTSF 164

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN---AQHNPVQW 159
            ++   ++K++ DK  +Y+G     YS       ++ E  +                V+ 
Sbjct: 165 MESVWWVFKQLFDKDLVYRGYRVMPYSTALNTPLSNFEAQQNYKDVQDPAVVVSFPLVED 224

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEF 186
            E     +  + +   + +    +P F
Sbjct: 225 PETCLLAWTTTPWTLPMNTGLAVNPTF 251


>gi|301154981|emb|CBW14444.1| isoleucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 941

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 73/441 (16%), Positives = 147/441 (33%), Gaps = 56/441 (12%)

Query: 89  ISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYN 137
           +S D  FI TTE          +       +++ +   + K  +S  +  R +    +  
Sbjct: 359 VSNDGKFISTTEFFAGKGVFEANPLVVEKLQEVGNLLKVEKIKHSYPHCWRHKTPIIFRA 418

Query: 138 DDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--E 191
             + + G + Q    Q       V+W+ + G        +++          + +P+   
Sbjct: 419 TPQWFIGMETQGLRQQALGEIKGVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPMTLF 478

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDW-GIKIPDDPQY----------------IMYVWIDA 234
              E        L+ L    K  +  GI+   D                    + VW D+
Sbjct: 479 VHKETEELHPRTLELLEEVAKRVEKAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDS 538

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
            + Y +        +G        D+++ G D     F +    +       P  + +  
Sbjct: 539 GSTYSSVVANRPEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTH 593

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  + KR   
Sbjct: 594 GFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE--ILKR--- 648

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQN 407
             A      +  +   +L + +G  P      P      D   ++      +EI+E   N
Sbjct: 649 --AADSYRRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKEAYDN 706

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQA 464
              H  + +++   S      Y D  K  +   K +     +       +   L   +  
Sbjct: 707 YQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAP 766

Query: 465 FVPKLANKIFDILFVADENRC 485
            +   A++I+  L      R 
Sbjct: 767 ILSFTADEIWGYLPQTATPRA 787



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKVTAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGY 165
                K+   G +YKG     + L   +   + EV              P V  +E E  
Sbjct: 167 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAVSAVEIEEK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FNAVGKGHGKLSAVIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|254190884|ref|ZP_04897391.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938559|gb|EDO94229.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|53726229|ref|YP_103806.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67641265|ref|ZP_00440047.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121600067|ref|YP_993955.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124384509|ref|YP_001027020.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126448402|ref|YP_001081643.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452873|ref|YP_001065252.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|166998899|ref|ZP_02264751.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|242317301|ref|ZP_04816317.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254175326|ref|ZP_04881986.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202509|ref|ZP_04908872.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207844|ref|ZP_04914194.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356261|ref|ZP_04972537.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823943|sp|Q62HL4|SYI1_BURMA RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52429652|gb|AAU50245.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228877|gb|ABM51395.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124292529|gb|ABN01798.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226515|gb|ABN90055.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126241272|gb|ABO04365.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746756|gb|EDK53833.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751738|gb|EDK58805.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025258|gb|EDK83412.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160696370|gb|EDP86340.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238522164|gb|EEP85610.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242140540|gb|EES26942.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243064980|gb|EES47166.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 922

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/472 (16%), Positives = 158/472 (33%), Gaps = 37/472 (7%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF---VDQNSRNFRDMADVLDI--SYDD 93
           +  GLDV      D  G    +A    G+        + +  +    +  +  I  SY  
Sbjct: 338 KKYGLDV--LCPVDAKGNMTEEAPGFEGLFYDEANKPITEKLQEAGALLKLNFITHSYPH 395

Query: 94  FIRTTEKR-HHDTCRILWKKISDKGDIYKGCYSGWYS--LRDEAYYNDDEVYKGADGQYY 150
             RT +      T +        +  + +      +     +   YN             
Sbjct: 396 DWRTKKPTIFRATAQWFASIDKIRDQLLEAVAETKWVPAWGETRLYNMVRDRGDWCISRQ 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            A   P+         F     Q+ +      H   +      N         L     +
Sbjct: 456 RAWGVPI-------PVFYAENGQEIITDETIDHVSALFREHGSNIWFEKEAKDLLPEGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
            +    G         IM VW D+ +++ +                PADL++ G D    
Sbjct: 509 HEGSPNGT--FFKEMDIMDVWFDSGSSHQSVLEER------DDLQRPADLYLEGSDQYRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    +  ++   P    +     +  +G K+SKSLGNV+ P +V+ ++G D LR +
Sbjct: 561 WFNSSLTTSVAVTGKAPYKGILSHGFALDGEGRKMSKSLGNVVLPSKVMNQLGADILRLW 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTES 386
           +        D     + LK+   A++   I N   R +   L D+D  +         E 
Sbjct: 621 VASVDYQ-SDVRVSDNILKQV--AEVYRKIRNTF-RFLLGNLADFDSTVNAVDVKDLREV 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDR 443
           D  ++   + ++ +++++ ++         V +   +     Y D  K    ++  +   
Sbjct: 677 DRYMMVKLNNLITKVKKSYEDYEFAGIYHAVHNFCTIELSSFYLDFAKDILYIEGKDQHD 736

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
              +  V  E +  L  L+   +P  A++++  + FV +E+     +   L 
Sbjct: 737 RRAIQTVLYETLLALTKLVTPILPHTADEVWSHIDFVKEESVQLVDMPDVLP 788



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I  A
Sbjct: 45  KDRPMYVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMSGYHAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +        R+    L +  D F    T +  +    
Sbjct: 105 LTKNKKVKRKEMSVADFRKLCEEYAYDQVDRQREQFMRLGVRGDWFNPYITLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++  G IYKG    ++S   E+   + E+  
Sbjct: 165 IKVFGEMAKNGLIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|297807697|ref|XP_002871732.1| hypothetical protein ARALYDRAFT_326110 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317569|gb|EFH47991.1| hypothetical protein ARALYDRAFT_326110 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1101

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 113/354 (31%), Gaps = 63/354 (17%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER---RNEVISFVKSGLKDLSLSRKT 213
           ++ +  + +F  +    +K L   E+    I+P        E     K+  + L  + + 
Sbjct: 630 IEPLVSKQWFVHMDPLAEKALLAVENKELTIIPERFEKDCEEDYIVAKNAEEALEKAHEK 689

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           +   ++I  DP  ++  W  +     +T G+ D        F+P ++   G        +
Sbjct: 690 YGKDVEIYQDPD-VLDTWFSSSLWPFSTLGWPDVSAKDFNNFYPTNMLETG--------M 740

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                  +  +P             +G K+SKSLGNVIDP++ I++ G DALR+ +    
Sbjct: 741 VMMGIEFTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTIKDFGTDALRFTIALGT 800

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE----- 388
           A G+D     + L    N    N + N     +  +    D          + D+     
Sbjct: 801 A-GQDLNLSTERLTA--NKAFTNKLWNAGKFVLHSLPSLSDTSAWENLLALKLDKEETLL 857

Query: 389 -------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                    +S    ++  +  + +      A                            
Sbjct: 858 SLPLPECWAVSKLHILIDSVTASYERLFFGDA---------------------------- 889

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                   V + V   +  LL  F+P +   ++  L    E        Q   P
Sbjct: 890 --------VLLYVFENILKLLHPFMPFVTEDLWQALPYRKEALIVSPWPQNSLP 935



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 22/158 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA  + + D++ R++R+ G   L+  GTD  G       +  
Sbjct: 314 PFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVEKM 373

Query: 66  GVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             +            F  +                + +    D S + F  T +++    
Sbjct: 374 LASEGIKRVDLGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERF--TLDEQLSRA 431

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + K+ DKG IY+G Y   +S   +   +D EV  
Sbjct: 432 VVEAFVKLHDKGLIYQGSYMVNWSPNLQTAVSDLEVEY 469


>gi|167718453|ref|ZP_02401689.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|56477955|ref|YP_159544.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821070|sp|Q5P221|SYI_AZOSE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56313998|emb|CAI08643.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 939

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 97/277 (35%), Gaps = 21/277 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T + T          +    WPA L++ G D     FH+       +    P
Sbjct: 543 LDVWFDSGTTHWTVLR----GSHAADSQWPAALYLEGSDQHRGWFHSSLLTGCAIDGRAP 598

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G+K+SKS GNV+ P EV +++G + LR ++           Y  + 
Sbjct: 599 YDALLTHGFVVDGQGKKMSKSKGNVVAPQEVSDKLGAEILRLWVAA-------TDYSGEL 651

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQE 400
              +   D    +   +  ++  +L +               + + D   L++  R+ ++
Sbjct: 652 TISKEILDRVVEVYRRLRNTLRFLLANTGDFDIARDGVPVEEWLDIDHYALALTRRLQEQ 711

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           +  +      H+ +  + +  +E     Y D  K      K +             + + 
Sbjct: 712 VTGDYARFEFHKIVQALQNFAAEDLGAFYVDILKDRLYTTKADSRARRAAQTALWHITQA 771

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           +  ++   +   A +I+ +     E+         L 
Sbjct: 772 ITRMMAPILTFTAEEIWRVTGNDAEDSVMLHTWHELP 808



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 12/217 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I    
Sbjct: 47  GRPKFVLHDGPPYANGDIHIGHAVNKILKDIIVRSKTLAGFDAPYVPGWDCHGLPIEHQI 106

Query: 63  QNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           +                + +  +     +     L +   +D+  RT    +        
Sbjct: 107 EKQHGKHLPADRARELCREYAAEQIERQKKDFIRLGVLGDWDNPYRTMNFSNEADEIRAL 166

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
            ++  KG ++KG     +     +   + EV              P+   E +       
Sbjct: 167 GELFRKGFLFKGLKPVNWCFDCGSALAEAEVEYQDKKSPAIDVGFPLVDNERDKLAHAFG 226

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                    Y             N+ ++     + +L
Sbjct: 227 LDTLPEQPVYIVIWTTTPWTIPSNQALNVHPELIYEL 263


>gi|255348662|ref|ZP_05380669.1| valyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503202|ref|ZP_05381592.1| valyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506880|ref|ZP_05382519.1| valyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 939

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYRLFEEYKN--FINKLWNGARFIFGHISELTSCDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K   D+  +    +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQGSDQQRSTKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKRRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|238489107|ref|XP_002375791.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus flavus
           NRRL3357]
 gi|220698179|gb|EED54519.1| isoleucyl-tRNA synthetase ,cytoplasmic [Aspergillus flavus
           NRRL3357]
          Length = 1077

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 97/275 (35%), Gaps = 13/275 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +   +   G+K+SK L N  DP  ++   G DALR +L+       +    K+
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPSLIMNRYGSDALRLYLINSPVVRAEPLRFKE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMIL-----KDYDGMIPTPGAFTE---SDESILSVCSR 396
              K + A +   + N        +      +  D +       T     D  IL+ C  
Sbjct: 641 AGVKEIVAKVLLPLWNSYKFFEGQVALLKKSQGVDYVFDPKAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNEEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRRRLKGENGVDDTLHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
             L   L  F P L + I+  L   + +  R   S
Sbjct: 761 YTLVRGLAPFTPFLTDTIYQKLLPHIPEALRSEDS 795



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 22/207 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 90  IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRYASEWRETIERLGRWIDFDNDYKTMNTSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN---AQHNPVQW 159
            ++   ++K++ DK  +Y+G     YS       ++ E  +                V+ 
Sbjct: 150 MESVWWVFKQLFDKDLVYRGYRVMPYSTALNTPLSNFEAQQNYKDVQDPAVVVSFPLVED 209

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEF 186
            E     +  + +   + +    +P F
Sbjct: 210 PETCLLAWTTTPWTLPMNTGLAVNPTF 236


>gi|167989899|ref|ZP_02570999.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168230304|ref|ZP_02655362.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194442276|ref|YP_002039276.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194470985|ref|ZP_03076969.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197264940|ref|ZP_03165014.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|238910800|ref|ZP_04654637.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|194400939|gb|ACF61161.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194457349|gb|EDX46188.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197243195|gb|EDY25815.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205331514|gb|EDZ18278.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335198|gb|EDZ21962.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|312911016|dbj|BAJ34990.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321222384|gb|EFX47456.1| Isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|15215421|gb|AAH12808.1| Valyl-tRNA synthetase [Homo sapiens]
 gi|168985661|emb|CAQ10126.1| valyl-tRNA synthetase [Homo sapiens]
 gi|168985920|emb|CAQ07253.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1264

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N  +W      ++        +     + P    P  R            
Sbjct: 705  HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L   ++ G+D   D + 
Sbjct: 883  QGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 397 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 456

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 457 EAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 490


>gi|88858003|ref|ZP_01132645.1| isoleucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819620|gb|EAR29433.1| isoleucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 942

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 96/272 (35%), Gaps = 23/272 (8%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           Q  + VW D+   +             +    PADL++ G D     F +    +  ++ 
Sbjct: 535 QDTLDVWFDSGVTHACVVD------AREDLVGPADLYLEGSDQHRGWFMSSMMTSVAING 588

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  + +     +   G K+SKSLGNVI P +V+ ++G D LR ++           Y 
Sbjct: 589 HAPYRQVLTHGFTVDENGRKMSKSLGNVISPQDVMNKLGADILRLWVAS-------TDYT 641

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRV 397
            +        + A      +  +   +L + +G  P           E D  IL   + +
Sbjct: 642 AEMTVSDEIFNRAADRYRRIRNTSRYLLSNLNGFNPATDLVAVEDMVELDRWILDRAAVI 701

Query: 398 LQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEV 454
            +EI     +  +     ++++   V     Y D  K  +   K +     +       +
Sbjct: 702 QEEIIAAYDDYQMLVVTQKLMNFCTVELGSFYLDVIKDRQYTAKADGLARRSCQTALFHI 761

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCF 486
              +   +   +   A +I+ +L    E   F
Sbjct: 762 AEAMTRWMAPIMSFTAQEIWQVLPGEREQFVF 793



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GH+   I+ D++ +   L   D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHLGHSVNKILKDIIIKAKTLSDFDAPYVPGWDCHGLPIELQ 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + + +Q     +     L +   +D    T         
Sbjct: 106 VEKKVGKPGQKVTAAEFREKCREYANQQVNGQKTDFIRLGVLGDWDRPYLTMNFDFEANA 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I   G  +KG     +     +   + EV  
Sbjct: 166 VRALGRIIKNGHFHKGSKPVHWCTDCGSALAEAEVEY 202


>gi|323128364|gb|ADX15794.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|168234789|ref|ZP_02659847.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194734368|ref|YP_002113057.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194709870|gb|ACF89091.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197291712|gb|EDY31062.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|322615804|gb|EFY12724.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620652|gb|EFY17512.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322621719|gb|EFY18569.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627445|gb|EFY24236.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322630751|gb|EFY27515.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638029|gb|EFY34730.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641318|gb|EFY37958.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647653|gb|EFY44138.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651487|gb|EFY47864.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322658783|gb|EFY55040.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322661774|gb|EFY57990.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666479|gb|EFY62657.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672362|gb|EFY68474.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676326|gb|EFY72397.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679581|gb|EFY75626.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684292|gb|EFY80296.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323191775|gb|EFZ77024.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198956|gb|EFZ84054.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201022|gb|EFZ86091.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209419|gb|EFZ94352.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323216636|gb|EGA01361.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219866|gb|EGA04345.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323228721|gb|EGA12850.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236665|gb|EGA20741.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239834|gb|EGA23881.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242118|gb|EGA26147.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247441|gb|EGA31396.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250542|gb|EGA34424.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259272|gb|EGA42914.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263849|gb|EGA47370.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265555|gb|EGA49051.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270001|gb|EGA53449.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 956

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 411 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 470

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 471 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 530

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 531 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 585

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 586 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 645

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 646 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 698

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 699 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 758

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 759 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 801



 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 58  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 117

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 118 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 155


>gi|167737503|ref|ZP_02410277.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|167909886|ref|ZP_02496977.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196170|ref|ZP_04902594.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169652913|gb|EDS85606.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|323166071|gb|EFZ51850.1| isoleucyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 860

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 363 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 422

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 423 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 477

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 478 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 536

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 537 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 589

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 590 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 649

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 650 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 709


>gi|325474930|gb|EGC78116.1| leucyl-tRNA synthetase [Treponema denticola F0402]
          Length = 858

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+    H+GH       D+ +RF R+ G +VL   G D  G      
Sbjct: 32  KDKRLYILDMFPYPSGDGLHVGHPEGYTATDIYSRFLRMSGYNVLHPMGFDSFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   +   +N   FR     + +SY  D  I T+E+ ++   + ++ ++  KG  
Sbjct: 92  AIKTGIHPLITTRKNMETFRKQIKSIGLSYDWDREISTSEESYYKWTQWIFLQLFKKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G            +Q      +  +++ Y ++LL  
Sbjct: 152 YEKEAPINWCPSCLTGLANEEVKDGK----CERCGAQIQRKNLRQWILKITEYAERLLED 207

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 208 LDELDWPESIKIMQKNWI 225



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/434 (13%), Positives = 123/434 (28%), Gaps = 79/434 (18%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T +  +      +  +  +    K           +   N          Q Y  +  P+
Sbjct: 389 TTEDGYSVNSKQFDGLKTEEAKTKITEYLESLGLAKRAVNYKLRDWIFSRQRYWGEPIPL 448

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                 G         +  L       E   P       ++ + S +             
Sbjct: 449 VHCPSCGIV----PLDEHDLPLTLPQVESYAPTGTGESPLAAIDSWVNTKCPKCGKEAKR 504

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
                        +     +      + D          P DL+V G +    H +Y   
Sbjct: 505 ETNTMPQWAGSCWYYLRFIDPHNNEAFADKEKCDYWM--PVDLYVGGTEHAVLHLLYARF 562

Query: 278 FL--------LSANLPLPKKV----FSHGFILHKGE------------------------ 301
           +         +S   P  + +     +    + K +                        
Sbjct: 563 WHKVLYDLGLVSTKEPFTRLINQGMITSFAYMRKNKSLVPVDKVKKISETEFEDIETGEK 622

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKSL NVI+P ++I+E G D LR + +          ++  G+         
Sbjct: 623 LEQVIAKMSKSLKNVINPDDIIKEYGADTLRLYEMFLGPLEVSKPWNTSGIMGVFR--FL 680

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I NL  R +           P     T   +++  + ++ ++++ E+  +   + A++
Sbjct: 681 EKIWNLSDREI--------YKTPVNDTSTPETKTLTVLLNKTIKKVTEDTASLNFNTAIS 732

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  ++EV ++                      +   V      LL  + P LA +++ 
Sbjct: 733 QMMIFINEVSKH--------------------KKIPHYVWYNFVKLLNPYAPHLAEELWQ 772

Query: 476 ILFVADENRCFQSL 489
            +   DE+  +   
Sbjct: 773 KMG-NDESIAYSHW 785


>gi|311743047|ref|ZP_07716855.1| valyl-tRNA synthetase [Aeromicrobium marinum DSM 15272]
 gi|311313727|gb|EFQ83636.1| valyl-tRNA synthetase [Aeromicrobium marinum DSM 15272]
          Length = 860

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 97/263 (36%), Gaps = 14/263 (5%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
              DP  ++  W  +       TG+  +P+   A  +P DL   G DI+     +    +
Sbjct: 500 FMADPD-VLDTWATSSLTPQLVTGWERDPE-LFAATYPMDLRPQGHDIIRTWLFSSVVRS 557

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 +P      S   +    +K+SKS GNV+ P E++   G DA+R+        G 
Sbjct: 558 HAEFGGVPWTHTALSGFVVDPDRKKMSKSKGNVVVPDEILRTYGADAVRWR-AAGARPGA 616

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFT-ESDESILSV 393
           D  +D+  +K  V   LA  + N     ++               P A T   D ++L+ 
Sbjct: 617 DSPFDEAQMK--VGRRLAMKVLNASKFVLAAEDAYGLGAGVADLDPAAVTVPLDRAMLTR 674

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
            S V+     + ++     AL        +  D Y +  K  E  + +    ++      
Sbjct: 675 LSGVVDAATAHFEDYDYASALEVTEKFFWDFCDDYLELVK--ERARRDDAEGASARSAFA 732

Query: 453 EVIRQLAILLQAFVPKLANKIFD 475
             +     LL  F+P +  +++ 
Sbjct: 733 LALAVQLRLLAPFLPYVTEEVWS 755



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + R+++Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +
Sbjct: 38  RSRDEVYSIDTPPPTVSGSLHVGHVFSYTHTDLIARYQRMRGKEVFYPMGWDDNGLPTER 97

Query: 61  AAQN 64
             QN
Sbjct: 98  RVQN 101


>gi|187777226|ref|ZP_02993699.1| hypothetical protein CLOSPO_00773 [Clostridium sporogenes ATCC
           15579]
 gi|187774154|gb|EDU37956.1| hypothetical protein CLOSPO_00773 [Clostridium sporogenes ATCC
           15579]
          Length = 813

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSKLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + ++ K+ +KG  YK
Sbjct: 91  KTGIHPKDSTFKNIETMESQLRAMGAMFNWENEVITCSPDYYKWTQWVFLKLYEKGLAYK 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V     E +F +++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVLDGK----CERCDSNVDKKNLEQWFLKITDYADELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 ELDWPEKTKAMQKHWI 222



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 91/263 (34%), Gaps = 27/263 (10%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWP--------A 277
           ++   W   L                  K  P D +V G +    H +Y           
Sbjct: 489 FVCSSWY-YLRYPDNNNEKEAFDPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDM 547

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             L+ + P          +   G K+SKS GN I P + I+E G D  R +L+      +
Sbjct: 548 GYLNFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGFDYTE 607

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
            G +  DG+K            + V R +    ++            + ++ +  V    
Sbjct: 608 GGAWSDDGIKS------IGRFIDRVERILENAREEIKNSKNNKSIMDKDEKELNYVRHHS 661

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++ I E++     + ++A+++   + + +Y            +  + ++      E I  
Sbjct: 662 IKSITEDIDKMQFNTSIARLMEFTNALSKYL---------GDDTFKNAS---FLKESIID 709

Query: 458 LAILLQAFVPKLANKIFDILFVA 480
              LL  F P  A + ++++ + 
Sbjct: 710 FIRLLAPFAPHFAEEQWELIGIN 732


>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785521|ref|YP_091350.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825316|sp|Q65JV7|SYI_BACLD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348023|gb|AAU40657.1| IleS [Bacillus licheniformis ATCC 14580]
 gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 922

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/463 (16%), Positives = 152/463 (32%), Gaps = 31/463 (6%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAG---VTTKVFVDQNSRNFRDMADVLDI--SYDDFIR 96
           GLDV      DE G   ++A    G         + +       +  +  I  SY    R
Sbjct: 341 GLDV--LCPVDEKGHMTSEAPGFEGLFYDQANKPITEQLEEKGALLKLDFITHSYPHDWR 398

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T +          +  I D  D              E             G +  ++   
Sbjct: 399 TKKPTIFRATAQWFASIKDFRDEL-LEAVKKTKWVPEWGETRLYNMIRDRGDWCISRQR- 456

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
                     F     +  +     +H   +      N       + L     +      
Sbjct: 457 --AWGVPIPVFYAENGEPIITDETINHVSELFREHGSNIWFEKEANELLPEGFTHPGSPN 514

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G       Q IM VW D+ +++             +    PADL++ G D     F++  
Sbjct: 515 G--KFTKEQDIMDVWFDSGSSHQAVLEER------EDLVRPADLYLEGSDQYRGWFNSSI 566

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             A  ++   P    +     +  +G K+SKSLGNV+ P +++ + G D LR ++     
Sbjct: 567 STAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNVVVPAKIMNQFGADILRLWVASVDY 626

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILS 392
              D       LK+   A++   I N   R +   + D+D            E D+ IL 
Sbjct: 627 QA-DVRVSDAILKQV--AEVYRKIRNTF-RFLHGNIADFDPAKDAIAVEDLREVDQYILI 682

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLY 449
             + +++++++  +          V +   +     Y D  K     +  +     ++  
Sbjct: 683 KLNSLIEKVKKAYEEYDFAVIYHAVHNFCAIELSSFYMDFAKDVVYIEHADHKDRRSMQT 742

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
           V  E +  L  L+   +P  A++++    FV++++     + +
Sbjct: 743 VFYETLLALVKLIAPILPHTADEMWSHFTFVSEKSVQLTDMPE 785



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   H+GHA   ++ D + R   + G    +  G D HG  I  A
Sbjct: 45  EGRPMFVLHDGPPYANGDIHMGHALNKVLKDFIVRSRSMSGYHAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  Q     +     L +  D      T +       
Sbjct: 105 LTKNKKVKRKEMTVAEFRKLCEEYAWQQIEGQKAQFKRLGVRGDWENPYVTLKPEFEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++S   E+   + E+     
Sbjct: 165 IKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYHDK 204


>gi|308185615|ref|YP_003929746.1| isoleucyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056125|gb|ADO08297.1| isoleucyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 126/399 (31%), Gaps = 44/399 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+    A       +   VQW+ + G   
Sbjct: 395 HVEKLLHSYPHCWRHKTPIIFRATPQWFISMDQKGLRAQS---LKEIKGVQWIPDWGQAR 451

Query: 168 RLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDP 224
             S   ++          + +P+      E        L  +    +     GI+   D 
Sbjct: 452 IESMVANRPDWCISRQRTWGVPMALFVHKESEELHPDTLALMEKVAQRVEQEGIQAWWDL 511

Query: 225 Q----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                              + VW D+ +   +                P DL++ G D  
Sbjct: 512 DPRELMGDDADHYVKVPDTLDVWFDSGSTSYSVVD----ARPEFGGHAP-DLYLEGSDQH 566

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR
Sbjct: 567 RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMNKLGADILR 626

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPG 381
            ++      G+      + LK+  +A         +  +   +L +  G  P      P 
Sbjct: 627 LWVASTDYSGEMAV-SDEILKRSADA------YRRIRNTARFLLANLSGFNPATDLVKPE 679

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +        +I  + +N   H  + +++   S      Y D  K  +   K
Sbjct: 680 EMVVVDRWAVGRAQAAQADIVASYENYDFHEVIQRLMQFCSIEMGSFYLDIIKDRQYTAK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     +       ++  L   +   +   A++I+  L
Sbjct: 740 GDGLARRSCQTALWHIVEALVRWMAPIMSFTADEIWGYL 778



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T +       
Sbjct: 106 VEQMIGKPGEKVSAAEFRAACRKYAAEQVEGQKADFIRLGVLGDWDRPYLTMDFGTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI   G ++KG     + L   +   + EV  
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCLDCRSALAEAEVEY 202


>gi|282890603|ref|ZP_06299126.1| hypothetical protein pah_c022o204 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499600|gb|EFB41896.1| hypothetical protein pah_c022o204 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 1035

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 130/379 (34%), Gaps = 13/379 (3%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +++ +S      +    G  +   E ++  D +  G  G++     +         +   
Sbjct: 396 IYRAMSTWFVAVEKIKDGLLASNREIHWTPDHIKHGRFGKWLEGARDW-AISRNRYWGTP 454

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           +  ++ +            L      +V    +  + DL + R       K+      + 
Sbjct: 455 IPIWRAEDGELIVIGSIAELEEAIGQKVEDLHRHFIDDLVIERNG-----KVFKRVTEVF 509

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
             W ++ +       Y           +PAD    G D     F+ +   +  L      
Sbjct: 510 DCWFESGSMPYAQNHYPFENRELFENNFPADFIAEGLDQTRGWFYTLTILSTALFDQPAF 569

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + +   +   G K+SK L N  DP  V+E+ G DA+R +++   A   D     +  
Sbjct: 570 KNVIVNGIILAEDGAKMSKRLRNYPDPTTVVEKYGADAVRLYMMHSPAVRADDLCFSEKG 629

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE---SDESILSVCSRVLQEIRE 403
            + V   +   + N  S  V+   + Y+               D+ +LS+ ++++ ++ E
Sbjct: 630 VELVLRQILIPMWNAYSFFVTYA-RIYNWTPSANEDLKPGAVIDQWLLSLLNKLVHQVEE 688

Query: 404 NMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            M    +  A+   ++ V ++ + Y    +    ++   +          + +  L  + 
Sbjct: 689 GMDAYDLSAAVEPFVTFVDQLTNWYIRRSRRRFWQEEANEDRHQAFSTLYQTLLTLTKIA 748

Query: 463 QAFVPKLANKIFDILFVAD 481
             F+P L   +++ L   +
Sbjct: 749 APFIPFLTESMYNNLRREE 767



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 19/128 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG------ 66
             +    PH GH     I DV+ R+  + G  V    G D HG  I    + +       
Sbjct: 40  PPFATGLPHYGHLLAGTIKDVVPRYKTMKGFCVPRRFGWDCHGLPIENEIEKSQGLSGAA 99

Query: 67  -----------VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V + +  ++     +   + + +  RT +    ++   ++KK+
Sbjct: 100 SIEAFGIANFNEECRKIVLRYTEEWKKTVTRMGRWVDFSNTYRTMDVSFMESVWWVFKKL 159

Query: 114 SDKGDIYK 121
            +KG +Y+
Sbjct: 160 YEKGLVYE 167


>gi|5454158|ref|NP_006286.1| valyl-tRNA synthetase [Homo sapiens]
 gi|12644177|sp|P26640|SYVC_HUMAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Protein G7a;
            AltName: Full=Valine--tRNA ligase; Short=ValRS
 gi|4529896|gb|AAD21819.1| G7A [Homo sapiens]
 gi|15277250|dbj|BAB63303.1| valyl tRNA synthetase [Homo sapiens]
 gi|55961424|emb|CAI18384.1| valyl-tRNA synthetase [Homo sapiens]
 gi|55961791|emb|CAI17732.1| valyl-tRNA synthetase [Homo sapiens]
 gi|55961915|emb|CAI18211.1| valyl-tRNA synthetase [Homo sapiens]
 gi|119623928|gb|EAX03523.1| valyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119623929|gb|EAX03524.1| valyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|168985308|emb|CAQ10624.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1264

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N  +W      ++        +     + P    P  R            
Sbjct: 705  HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L   ++ G+D   D + 
Sbjct: 883  QGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 397 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 456

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 457 EAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 490


>gi|317502112|ref|ZP_07960293.1| leucine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316896501|gb|EFV18591.1| leucine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 822

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 47  KKQKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAENY 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 107 AIKMGVHPAKSTAENVANIKRQINEIAALYDWDMEVNTTDPNFYKWTQWIFVKMFKEGLA 166

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 167 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGAEVTKKNLRQWMLKITAYADRLLND 222

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 223 LDKLDWPEKVKKMQADWI 240



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 124/360 (34%), Gaps = 62/360 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            E      +G   L+   
Sbjct: 432 FKLRDWVFSRQRYWGEPIPIIHCPDCGNVPVPEEELPLTLPDVESYEPTGTGESPLAGIE 491

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
           +  +    +   P       M  W    +++          D          +  P D++
Sbjct: 492 EWVNCTCPVCGKPAKRETNTMPQWA--GSSWYFLRYVDSKNDKELVSREKADEMLPVDMY 549

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G K+SKS GNV+ P
Sbjct: 550 IGGVEHAVLHLLYSRFYTKFLYDIGVVDFDEPFHKLFNQGMITGKNGIKMSKSKGNVVSP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++ + G D+LR + +       D  +D  G+         +G+   + R  ++++   
Sbjct: 610 DALVNDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKRLWNLLMD-- 658

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                +  A  +  + ++ +  +++ +I   +++  ++  ++  +      +++ +  K 
Sbjct: 659 -----SKEADVQPTKEMIKLRHKMVYDITNRLESFSLNTVISGFMEYN---NKFIEMAK- 709

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
              K+   D+         E +  +A+LL  F P  A ++++ L   +      + S D+
Sbjct: 710 ---KEGGIDK---------ETLETIAVLLSPFAPHFAEEMWEQLGHGETIFKAGWPSYDE 757


>gi|292657053|ref|YP_003536950.1| valyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372246|gb|ADE04473.1| valyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 870

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 77/445 (17%), Positives = 150/445 (33%), Gaps = 32/445 (7%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE G    +A   AG++     D+         D      D    T 
Sbjct: 282 WYQAHDLPLRVAIDESGTMTEEADDYAGLS----ADEAREAIVSDLDDAGALLDKRAITH 337

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C    + +       K         + E Y    E       + +    N ++
Sbjct: 338 TVNVHERCGTSVEFLVKDQWYIKL------LDKREEYLEAGEQMDWYPEKMFTRYKNWIE 391

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            ++ +    R  +       +Y    E ++  +R +  +  +  G    +      + G 
Sbjct: 392 GLQWDWAISRQRSSGIPFPVWYCEDCEHVVVADREDLPVDPLSDGPPVDAC----PECGH 447

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFHAI 273
                   +   W  +    L   G+  N      +  + + +P D+   G DI+ F   
Sbjct: 448 DEFAAEDDVFDTWATSSLTPLINAGWDWNPETEAMELDRPELYPFDMRPQGHDIISFWLF 507

Query: 274 YWP--AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P    + +   +    EK+SKS+GNV+ P EV+E+  VDA RY+   
Sbjct: 508 HTVVKCYEHTGEVPFDSVMINGMVLDENREKMSKSVGNVVSPDEVLEKFPVDAARYW-AA 566

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  Y + GL       L   + N  S+ V  + +D              D  +L
Sbjct: 567 GSAVGDDLPYQEKGLVA--GEKLMRKLWN-ASKLVESLTEDAPAEF-DHDDLKAIDRWLL 622

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLY 449
           +   R L+ + E ++N+   +A  ++ S       D Y +  K    +  +P  A    Y
Sbjct: 623 ASLDRELEFVTEKLENREFSKARDRLRSFFWHTFCDDYLEIAKQRVREGDDPSAA----Y 678

Query: 450 VTVEVIRQLAILLQAFVPKLANKIF 474
                 ++        +  +  +++
Sbjct: 679 TLQTAHKRFLACFAPILAHVTEELW 703



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 15/171 (8%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I +     +   H GH Y   + D +ARF R+ G +V F  G D++G       ++  
Sbjct: 38  FSIDSPPPTVSGSLHWGHVYGFTLQDFVARFTRMRGDEVYFPFGYDDNGIASELLTEDEL 97

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWK 111
                           +    +    F +    L IS  +D   +T         ++ + 
Sbjct: 98  GIKHQDYERREFQKLCREVTAEYESEFTEKMQNLGISIDWDQTYQTISPEVQRVSQLSFV 157

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            + +KG  Y+      +    E   +  E      G +++     V   EE
Sbjct: 158 DLYEKGRQYRQRAPAIWCPECETAISQVETEDDEQGSHFHDIEFGVADSEE 208


>gi|167917909|ref|ZP_02505000.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|153815858|ref|ZP_01968526.1| hypothetical protein RUMTOR_02103 [Ruminococcus torques ATCC 27756]
 gi|145846883|gb|EDK23801.1| hypothetical protein RUMTOR_02103 [Ruminococcus torques ATCC 27756]
          Length = 822

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 47  KKQKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAENY 106

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV       +N  N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 107 AIKMGVHPAKSTAENVANIKRQINEIAALYDWDMEVNTTDPNFYKWTQWIFVKMFKEGLA 166

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  +++AY D+LL+ 
Sbjct: 167 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGAEVTKKNLRQWMLKITAYADRLLND 222

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 223 LDKLDWPEKVKKMQADWI 240



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 62/360 (17%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKSGLKDLSLSR 211
            +   + F    Y  + +          +P+            +      +G   L+   
Sbjct: 432 FKLRDWVFSRQRYWGEPIPIIHCPDCGNVPVPEEELPLTLPDVDSYEPTGTGESPLAGIE 491

Query: 212 KTFDWGIKIPDDPQY----IMYVWIDALTNYLTTTGYLDNPDGSK------AKFWPADLH 261
           +  +    +   P       M  W    +++          D          +  P D++
Sbjct: 492 EWVNCTCPVCGKPAKRETNTMPQWA--GSSWYFLRYVDSKNDKELVSREKADEMLPVDMY 549

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           + G +    H +Y   +         +  + P  K           G K+SKS GNV+ P
Sbjct: 550 IGGVEHAVLHLLYSRFYTKFLYDIGVVDFDEPFHKLFNQGMITGKNGIKMSKSKGNVVSP 609

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++ + G D+LR + +       D  +D  G+         +G+   + R  ++++   
Sbjct: 610 DALVNDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVNRFLKRLWNLLMD-- 658

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                +  A  +  + ++ +  +++ +I   +++  ++  ++  +      +++ +  K 
Sbjct: 659 -----SKEADVQPTKEMIKLRHKMVYDITNRLESFSLNTVISGFMEYN---NKFIEMAK- 709

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
              K+   D+         E +  +A+LL  F P  A ++++ L   +      + S D+
Sbjct: 710 ---KEGGIDK---------ETLETIAVLLSPFAPHFAEEMWEQLGHGETIFKAGWPSYDE 757


>gi|53718547|ref|YP_107533.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134281015|ref|ZP_01767724.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167814621|ref|ZP_02446301.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167823091|ref|ZP_02454562.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226194373|ref|ZP_03789971.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237811169|ref|YP_002895620.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|81824819|sp|Q63WI3|SYI1_BURPS RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52208961|emb|CAH34900.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134247321|gb|EBA47406.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|225933458|gb|EEH29447.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505211|gb|ACQ97529.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|225349692|gb|ACN87771.1| MetRS [Lactobacillus casei]
          Length = 211

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|217964190|ref|YP_002349868.1| leucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|224499242|ref|ZP_03667591.1| leucyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|254782504|sp|B8DFR1|SYL_LISMH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217333460|gb|ACK39254.1| leucyl-tRNA synthetase [Listeria monocytogenes HCC23]
          Length = 803

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 136/414 (32%), Gaps = 61/414 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 341 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 401 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 461 GESPLANLHDWVNVTDENGRKGRRETNTMPQWAGSSWYFLRYIDPKNSEAIADKEKLAEW 520

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 521 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 581 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 631

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 632 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 688

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                             T+    VE       LL    P LA ++++IL   +
Sbjct: 689 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTE 723


>gi|167901637|ref|ZP_02488842.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217419606|ref|ZP_03451112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396910|gb|EEC36926.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|115492075|ref|XP_001210665.1| isoleucyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114197525|gb|EAU39225.1| isoleucyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 1078

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 105/292 (35%), Gaps = 12/292 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 522 VFDCWFESGSMPYASQHYPFENKEQFEKGFPGDFIAEGLDQTRGWFYTLTVLGTHLFGRL 581

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  ++++ G DALR +L+       +   + +
Sbjct: 582 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPALIMQKYGSDALRLYLINSPVVRAEPLRFKE 641

Query: 344 DG---LKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFTE---SDESILSVCSR 396
            G   +  +V   L N       ++      +  D +       T     D  IL+ C  
Sbjct: 642 SGVKEIVAKVLLPLWNSYKFFEGQAALFKKNNGIDYVFDPKAEATNTNVMDRWILASCQS 701

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 702 LLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRKRLKGENGVDDTQHALNTLFEVL 761

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             L   L  F P + + I+  L +       +S D R        +  + +F
Sbjct: 762 FTLVRGLAPFTPFITDTIYLRL-LPHIPESLRSEDSRSVHFLPFPEVREELF 812



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K RE         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 31  KGREPYTFFDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 90

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R+  + L   I +D+  +T     
Sbjct: 91  IDKKLGMSGLEAVEKLGIEKYNEECRAIVMRFASEWRETIERLGRWIDFDNDYKTMNPSF 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 151 MESVWWVFKQLFDKGLVYRGYRVMPYSTALNTPLSNFEAQQNYK 194


>gi|126442280|ref|YP_001058018.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126221773|gb|ABN85279.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|225349680|gb|ACN87765.1| MetRS [Lactobacillus casei]
 gi|225349684|gb|ACN87767.1| MetRS [Lactobacillus casei]
 gi|225349690|gb|ACN87770.1| MetRS [Lactobacillus casei]
 gi|225349694|gb|ACN87772.1| MetRS [Lactobacillus casei]
 gi|225349696|gb|ACN87773.1| MetRS [Lactobacillus casei]
 gi|225349698|gb|ACN87774.1| MetRS [Lactobacillus casei]
 gi|225349700|gb|ACN87775.1| MetRS [Lactobacillus casei]
          Length = 211

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|76809344|ref|YP_332534.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254181497|ref|ZP_04888094.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254258530|ref|ZP_04949584.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|76578797|gb|ABA48272.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|184212035|gb|EDU09078.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254217219|gb|EET06603.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAGQWLEIDRYAVAFAAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKRFGKSLPAAEVMAKARAYATEQIEKQKVGFKR 148


>gi|330718573|ref|ZP_08313173.1| leucyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 809

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y      YP+ Q  H+GH       D+++R+ R  G +VL   G D  G    +
Sbjct: 28  TNKPKYYAMDMFPYPSGQGLHVGHPEGYTATDIMSRYKRAQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F +QN   F+     L  S D    I TT+   +   + +++K+ +KG 
Sbjct: 88  YAIKTGNNPAEFTNQNIEVFKKQVKSLGFSIDWSREINTTDPEFYKWSQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWY---SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
            Y+      +            ++EV  G   +        V  +  + +  +++AY ++
Sbjct: 148 AYEDEMMVNWAPDFPGGGIVVANEEVINGKTERGGYD----VYRVPMKQWVLKITAYAER 203

Query: 176 LLSYYESHPE 185
           LLS  +    
Sbjct: 204 LLSDLDDLDW 213



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 103/285 (36%), Gaps = 42/285 (14%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+            K  +W   DL+V G +    H +Y   +         +   
Sbjct: 503 WYFLRYVDPHNNEALASKDKLDYWMNVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTK 562

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K V     +    EK+SKS GNV++P +++   G D LR + +      +   + +
Sbjct: 563 EPFQKLVNQGMILGENHEKMSKSKGNVVNPDDIVSTYGADTLRVYEMFMGPLTQSKPWSE 622

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +G+               + R   +++ D D +             +  +  + ++++ +
Sbjct: 623 EGISGS---------RRWLDRVWRLLIDDEDRLRDHVTTVNTG--ELDKIYHQTVKKVTD 671

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +++N   + A++Q++  V+E  +                       + V+ +     LL 
Sbjct: 672 DLENMRFNTAISQLMVFVNEAYK--------------------AEALPVQYMNGFIQLLA 711

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              P +A +++  L  +D+   + +  +      ++  T + +F 
Sbjct: 712 PIAPHIAQELWSKLDNSDD-LSYAAWPKY-DASQLVEDTAEIVFQ 754


>gi|24111471|ref|NP_705981.1| isoleucyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|81723790|sp|Q83MH2|SYI_SHIFL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24050221|gb|AAN41688.1| isoleucine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|281599387|gb|ADA72371.1| Isoleucyl-tRNA synthetase [Shigella flexneri 2002017]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWLPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|315149525|gb|EFT93541.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|307290035|ref|ZP_07569959.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
 gi|306498877|gb|EFM68371.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|256617927|ref|ZP_05474773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256962571|ref|ZP_05566742.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256597454|gb|EEU16630.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256953067|gb|EEU69699.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 928

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 572 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 631 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 684

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 685 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 744

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 745 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 47  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 106

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 107 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 167 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 202


>gi|85859341|ref|YP_461543.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722432|gb|ABC77375.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 97/263 (36%), Gaps = 15/263 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++        N +       P+D+++ G D     FH+    + 
Sbjct: 527 FRKETDILDVWFDSGVSHAAVLEKRPNLNS------PSDMYLEGSDQHRGWFHSSLLESV 580

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKS+GNVI+  ++I+  G + LR ++  E     D
Sbjct: 581 GTRNRAPYRNVLTHGFVVDGEGKKMSKSVGNVIESQQIIDAYGAEILRLWVASEDYTV-D 639

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+ V  +    I N     +  +   + +            D  +L     +
Sbjct: 640 LRISDEILKRLV--EAYRRIRNTSRFILGNLYDFNVESDSVAYADLEPMDRWMLHRLQEL 697

Query: 398 LQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEV 454
           ++++R +  N   H   + + +   V     Y D  K      + +     +   V  ++
Sbjct: 698 IRKVRTSYDNFQFHAVFSALYNFCTVDLSALYLDVLKDRLYTSRADSRERRSAQTVMFQI 757

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
              +  LL   +   A +I+  L
Sbjct: 758 ANDMTRLLAPILTFTAEEIWTAL 780



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   +     Y N   H+GHA   II D++ +   + G D  F  G D HG  I   
Sbjct: 45  RGRQSYILHDGPPYANGNIHLGHALNKIIKDIVIKSKSMTGCDCGFVPGWDCHGLPIEHQ 104

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                   K             V+ D+     R+    L +   +++   T    +  T 
Sbjct: 105 VDKELGEKKTELSQADKRRLCRVYADKYVGIQREQFKRLGVFGEWENPYLTMHYDYEATT 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + K+   G +YKG    ++    +    + EV  
Sbjct: 165 VEEFGKLYLGGAVYKGKKPVYWCASCKTALAEAEVEY 201


>gi|83770539|dbj|BAE60672.1| unnamed protein product [Aspergillus oryzae]
          Length = 1097

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 97/275 (35%), Gaps = 13/275 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 541 VFDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +   +   G+K+SK L N  DP  ++   G DALR +L+       +    K+
Sbjct: 601 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPSLIMNRYGSDALRLYLINSPVVRAEPLRFKE 660

Query: 345 GLKKRVNADLANGIGNLVSRSVSMIL-----KDYDGMIPTPGAFTE---SDESILSVCSR 396
              K + A +   + N        +      +  D +       T     D  IL+ C  
Sbjct: 661 AGVKEIVAKVLLPLWNSYKFFEGQVALLKKSQGVDYVFDPKAEATNTNVMDRWILASCQS 720

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 721 LLKFVNEEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRRRLKGENGVDDTLHALNTLFEVL 780

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
             L   L  F P L + I+  L   + +  R   S
Sbjct: 781 YTLVRGLAPFTPFLTDTIYQKLLPHIPEALRSEDS 815



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 59/236 (25%), Gaps = 22/236 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIE-- 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                        +   +  +  + L I          +++++ CR +            
Sbjct: 88  --------YEIDKKLGMSGLEAVEKLGI----------EKYNEECRAIV-MRYASEWRET 128

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
               G +   D  Y  + +               P+               Q        
Sbjct: 129 IERLGRWIDFDNDYKVESQPMSYF-YFCKERGKRPLTMNTSFMESVWWVFKQLFDKDLVY 187

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                +      N  +S  ++      +          + +DP+  +  W      
Sbjct: 188 RGYRVMPYSTALNTPLSNFEAQQNYKDVQDPAVVVSFPLVEDPETCLLAWTTTPWT 243


>gi|257415622|ref|ZP_05592616.1| isoleucyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157450|gb|EEU87410.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|257081256|ref|ZP_05575617.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989286|gb|EEU76588.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|229546850|ref|ZP_04435575.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|257086362|ref|ZP_05580723.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089412|ref|ZP_05583773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307272017|ref|ZP_07553283.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|307289395|ref|ZP_07569349.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|312904565|ref|ZP_07763723.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|229308015|gb|EEN74002.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256994392|gb|EEU81694.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998224|gb|EEU84744.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306499650|gb|EFM69013.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|306511312|gb|EFM80316.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|310632078|gb|EFQ15361.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|315026979|gb|EFT38911.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
 gi|315144388|gb|EFT88404.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
 gi|315162932|gb|EFU06949.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
 gi|315165132|gb|EFU09149.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
 gi|315577381|gb|EFU89572.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|42527840|ref|NP_972938.1| leucyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|60390722|sp|Q73K81|SYL_TREDE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|41818668|gb|AAS12857.1| leucyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 858

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+    H+GH       D+ +RF R+ G +VL   G D  G      
Sbjct: 32  KDKRLYILDMFPYPSGDGLHVGHPEGYTATDIYSRFLRMSGYNVLHPMGFDSFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G+   +   +N   FR     + +SY  D  I T+E+ ++   + ++ ++  KG  
Sbjct: 92  AIKTGIHPLITTRKNMETFRKQIKSIGLSYDWDREISTSEESYYKWTQWIFLQLFKKGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +         ++EV  G            +Q      +  +++ Y ++LL  
Sbjct: 152 YEKEAPINWCPSCLTGLANEEVKDGK----CERCGAQIQRKNLRQWILKITEYAERLLED 207

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 208 LDELDWPESIKIMQKNWI 225



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/434 (13%), Positives = 123/434 (28%), Gaps = 79/434 (18%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T +  +      +  +  +    K           +   N          Q Y  +  P+
Sbjct: 389 TTEDGYSVNSKQFDGLKTEEAKTKITEHLENLGIAKRAVNYKLRDWIFSRQRYWGEPIPL 448

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                 G         +  L       E   P       ++ + S +             
Sbjct: 449 VHCPSCGIV----PLNEHDLPLTLPQVESYAPTGTGESPLAAIDSWVNTKCPKCGKEAKR 504

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
                        +     +      + D          P DL+V G +    H +Y   
Sbjct: 505 ETNTMPQWAGSCWYYLRFIDPHNNEAFADKEKCDYWM--PVDLYVGGTEHAVLHLLYARF 562

Query: 278 FL--------LSANLPLPKKV----FSHGFILHKGE------------------------ 301
           +         +S   P  + +     +    + K +                        
Sbjct: 563 WHKVLYDLGLVSTKEPFTRLINQGMITSFAYMRKNKSLVPVDKVKKISETEFEDIETGEK 622

Query: 302 ------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                 K+SKSL NVI+P ++I+E G D LR + +          ++  G+         
Sbjct: 623 LEQVIAKMSKSLKNVINPDDIIKEYGADTLRLYEMFLGPLEVSKPWNTSGIMGVFR--FL 680

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I NL  R +           P     T   +++  + ++ ++++ E+  +   + A++
Sbjct: 681 EKIWNLSDREI--------YKTPVNDTSTPETKTLTVLLNKTIKKVTEDTASLNFNTAIS 732

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  ++EV ++                      +   V      LL  + P LA +++ 
Sbjct: 733 QMMIFINEVSKH--------------------KKIPHYVWYNFVKLLNPYAPHLAEELWQ 772

Query: 476 ILFVADENRCFQSL 489
            +   DE+  +   
Sbjct: 773 KMG-NDESIAYSHW 785


>gi|255974072|ref|ZP_05424658.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|255966944|gb|EET97566.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
          Length = 928

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 572 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 631 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 684

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 685 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 744

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 745 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 47  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 106

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 107 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 167 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 202


>gi|156538399|ref|XP_001605688.1| PREDICTED: similar to GA17927-PA [Nasonia vitripennis]
          Length = 1039

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 76/417 (18%), Positives = 134/417 (32%), Gaps = 96/417 (23%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + V+ + +  ++ +            +S    I+P + +     +++ G++D  +
Sbjct: 447 CSRSKDIVEPLIKPQWYIKCDEMAASATEAVKSGELKIIPEQFKKTWYYWME-GIRDWCI 505

Query: 210 SRKTFDWGIKIP----------------------------------------------DD 223
           SR+   WG +IP                                               D
Sbjct: 506 SRQ-LWWGHRIPAYYISIEGANIEASDDDRWVSARSEDEAKEKAAKKFGVSKDKILLKQD 564

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLS 281
           P  ++  W  +     +  G+ D  +   A F+P  L   G DIL F    + +    L 
Sbjct: 565 PD-VLDTWFSSGLFPFSIFGWPDQTEELNA-FYPGTLLETGHDILFFWVARMVFLGQKLL 622

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------------ 317
             LP  +           G K+SKSLGNVIDP++VI                        
Sbjct: 623 GKLPFKEVYLHAMVRDAHGRKMSKSLGNVIDPMDVIRGTTLENLHKQLLDSNLDPKELKR 682

Query: 318 -------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                         E G DALR+ L    + G+D   + D L+ +      N + N    
Sbjct: 683 AMEGQKQDYPQGIPECGTDALRFALCSYTSQGRDI--NLDILRVQGYRFFCNKLWNAAKF 740

Query: 365 SVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV- 421
           + +     +  D      G  +  D  +LS  S   Q   + +     + A     +L  
Sbjct: 741 AFTYFGDGFKYDEAEDLTGNESNIDLWMLSRVSYAAQVCDDGLGQYDFNSATTACYNLWL 800

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D Y +  KP     T   +      V  + +     LL  F+P +  +++  L
Sbjct: 801 YDLCDVYLECLKPVFQSGTEQQK-QAAQRVLFKTLDVGLRLLSPFMPFITEELYQRL 856



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 19/157 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  +           H+GHA    + D + R++R+ G   L+  G D  G       +
Sbjct: 120 KGKFVMVIPPPNVTGFLHLGHALTNAVEDAITRWNRMKGRTTLWNPGCDHAGIATQVVVE 179

Query: 64  NAGVT---------------TKVFVDQNSR--NFRDMADVLDISYDDFIR--TTEKRHHD 104
                                K++  +N +     D    L  S+D      T + +   
Sbjct: 180 KKLWREEKKTRHDLGREKFVEKIWEWKNEKGGRIYDQLKKLGSSFDWERACFTMDPKLCR 239

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + ++ D+G IY+      +S   ++  +D EV
Sbjct: 240 AVTEAFVRLHDEGTIYRSNRLVNWSCTLKSAISDIEV 276


>gi|289434947|ref|YP_003464819.1| hypothetical protein lse_1582 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171191|emb|CBH27733.1| leuS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 806

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 206

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 207 DLDLVDWPENIKDMQRNWIGRSE 229



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 500 WYFLRYIDPNNTEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 559

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 560 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNE 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+              + R   +++   +         TE + ++      +++ +  
Sbjct: 620 NGLEGS---------RKFLDRIWRLLV--TEEGTLAEKVTTEPNANLEKAYHHMVKTVTN 668

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +      P                   E +     LL 
Sbjct: 669 HFENLRFNTGISQLMIFINEAYK--QDTIP------------------KEYVEGFVQLLS 708

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 709 PIAPHLAEELWEILGHTE 726


>gi|258612176|ref|ZP_05268358.2| leucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|258609257|gb|EEW21865.1| leucyl-tRNA synthetase [Listeria monocytogenes F6900]
          Length = 806

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 206

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 207 DLDLVDWPENIKDMQRNWIGRSE 229



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 500 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 559

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 560 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 620 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 668

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 669 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 708

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 709 PIAPHLAEELWEILGHTE 726


>gi|186475341|ref|YP_001856811.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|254782378|sp|B2JDY9|SYI_BURP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|184191800|gb|ACC69765.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 945

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 15/255 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVSNRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+   +     I N + R +   L D+D        G + E D   +++ + +  +I  
Sbjct: 665 LKRVTES--YRRIRNTL-RFLLANLSDFDIGKHARPVGEWLEIDRYAVALTANLQADILS 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
           +      H  +A++ +  SE     Y D  K        +     +       +   L  
Sbjct: 722 HYDRYEFHPVVAKLQTFCSEDLGGFYLDVLKDRLYTTAADSKARRSAQTALYHIAHGLLR 781

Query: 461 LLQAFVPKLANKIFD 475
           L+  F+   A + + 
Sbjct: 782 LMAPFLSFTAEEAWK 796



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKAGFRRLGVLGDWDNPYKTMNFANEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|56412319|ref|YP_149394.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361256|ref|YP_002140891.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81821363|sp|Q5PDL9|SYI_SALPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782432|sp|B5BLL0|SYI_SALPK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56126576|gb|AAV76082.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092731|emb|CAR58154.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 944

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 399 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 458

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 459 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 518

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 519 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 573

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 574 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 633

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 634 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 686

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 687 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 746

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 747 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLLGEREKYVF 789



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|150404045|gb|ABR68336.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404089|gb|ABR68358.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404103|gb|ABR68365.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404113|gb|ABR68370.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|154341971|ref|XP_001566937.1| valyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064262|emb|CAM40461.1| putative valyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 967

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 85/477 (17%), Positives = 144/477 (30%), Gaps = 108/477 (22%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-------YKGADGQYYNAQH 154
            H+  +++   +     +        +  R E     +E+                    
Sbjct: 307 RHNLQQLVMMDLKGYVTMEPFKGMHRFDCRREIVKKLEEMGLLRGVEPYEYRVGCCERTG 366

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           + V+ M    +F   S    + +    +    + P         +++  +K   +SR+  
Sbjct: 367 DIVEPMVMPQWFIDCSDMARRSVEAVRNGDLRLYPPSHEAVWYHWLE-NIKPWCVSRQ-L 424

Query: 215 DWGIKIP-----------DDPQ---------------------------------YIMYV 230
            WG +IP            DP                                   ++  
Sbjct: 425 WWGHRIPAYKVVGPLSQDVDPWVVARNLEEAHAKAKKKFSLSEAQIAECSFEQDPDVLDT 484

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLP-KK 289
           W  +     +T G+ ++ D     F+P  L   G DIL F         L     LP ++
Sbjct: 485 WFSSGLWPFSTLGWPNDSD-DMQLFFPNSLMETGHDILFFWVARMVMLSLHFTDQLPYRE 543

Query: 290 VFSHGFILHK-GEKISKSLGNVIDPIEVIEEV---------------------------- 320
           VF H  +  K GEK+SKS GNVIDP+ V+  V                            
Sbjct: 544 VFLHAMVRDKNGEKMSKSKGNVIDPLYVVHGVSLQTLNDAVRSGNLSDKEVEKAIKQQKE 603

Query: 321 ---------GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
                    G DALR+ L+     G+    D   +         N + N+V   +   L 
Sbjct: 604 FFPDGIPVCGSDALRFGLLSYTQSGRSVNLDIQRVVA--YRQFCNKLWNVVRYVLYHALG 661

Query: 372 -----DYDGMIPTPGA--FTESDESILSVCSRVLQEIRENMQNQLIHRALA--QVISLV- 421
                +     P   A         ILS     + E  + M   L   AL    V     
Sbjct: 662 TDYLPNKQQFSPAEDAAVLPLECRWILSRLDTAIVEATQGMSEGLYDFALTTGAVYRFWL 721

Query: 422 -SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               D + +  KP   K    ++   V  V + V+ +   LL   +P +  +++  L
Sbjct: 722 YELCDVFLELTKPTIQKGG--EKRQLVQDVLLYVVERALRLLHPMMPFVTEELWHRL 776



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   I           H+GHA    + D L RFHR+ G + L+  GTD  G       + 
Sbjct: 37  KPFVIVAPPPNVTGYLHLGHALTGAVQDTLTRFHRMKGDNTLYLPGTDHAGIATQVVVER 96

Query: 65  AGVTTK----------VFVDQNSRNFR-------DMADVLDISYD--DFIRTTEKRHHDT 105
             +  +           F  +     +       +    + +S D      T ++R    
Sbjct: 97  RVMKEEGKSRHDLGRDEFTKRLWDFKKNHAGVITEQLRKIGLSLDWTRERFTMDERSSAA 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + ++ + G +++      +    ++  +D EV  
Sbjct: 157 VVEAFVRLHEDGLVHRDTRLVNWCCALQSAISDLEVEF 194


>gi|307278946|ref|ZP_07560005.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
 gi|306504333|gb|EFM73544.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|206896117|ref|YP_002247032.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738734|gb|ACI17812.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 906

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/477 (16%), Positives = 140/477 (29%), Gaps = 44/477 (9%)

Query: 18  AQPHI--GHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV---TTKVF 72
              HI  GH  E         +   +   + F    D+ G+   +A   AGV        
Sbjct: 321 GIVHIAPGHGEED--------YLVWEEKGLDFPMMIDDSGRFTEQAGFLAGVFYADANDM 372

Query: 73  VDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT-CRILWKKISDKGDIYKGCYSGWYS 129
           V         +     +  SY    R           +        + +  +      + 
Sbjct: 373 VLDLLTRKGKLLHKGMVTHSYPHCWRCHNPVIFRALSQWFIDVDLYRNEALEALKEVQWI 432

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
                    D V    D      +   V     +      S    +++    +       
Sbjct: 433 PMGSDVRIGDMVKSRPDWCLSRQRIWGVPIPSIKCSHCGRSILDPRVVRNVAAVVRKEGS 492

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPD 249
               +E +        +        D G K  +    I+ VW D+  ++           
Sbjct: 493 NIWYSEPLEAFLPAKME------CPDCGSKDFEKEYDILDVWFDSGVSHYAVLEQY---- 542

Query: 250 GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                 WPADL++ G D     F      A  L    P    +     +   G  +SKSL
Sbjct: 543 --DGMRWPADLYLEGYDQHRGWFQTSLLTAVPLKGQAPYKTVLSHGFVLDESGRAMSKSL 600

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVIDP +V+  VG D LR  L+          Y  D    +   + A+ I   +  +  
Sbjct: 601 GNVIDPSDVVANVGADVLRLALLMS-------DYTADIQVGQNIFNQASEIYKKIRNTFR 653

Query: 368 MILKD-YDGMIPTP---GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
            +  + +D               D  IL   + + +++     N   +  ++   S    
Sbjct: 654 FMEGNLFDFQSSDEVPFAEMKPLDRWILGRWTDMKRKLSSAFDNYEFYSFVSIFHSFCVK 713

Query: 422 SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                Y DA K    LKK + +   +       +  +  +L+   +   A +++  L
Sbjct: 714 ELSSTYLDAIKSRLYLKKPDSEERRSAQTALKIMATEFPVLIAPILTFTAEEMWQAL 770



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+G A   ++ D + ++  L G    +  G D HG  I + 
Sbjct: 50  KNSPLFILHDGPPYANGDIHLGTALNKVLKDAVNKYKLLRGFKTPYVPGWDTHGLPIEQQ 109

Query: 62  -AQNAGVTTKVFVDQNSRNFRDMADVLDIS--------------YDDFIRTTEKRHHDTC 106
             +   +  + F     R+      +  I               + D+  T +  +    
Sbjct: 110 VTKQTKINPEDFAVTEWRDKCKDFALSYIDKQMKSFKRLGVLGLWKDYYATFKPEYEGKE 169

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             +   + +KG + +     ++    +    + E+   
Sbjct: 170 LEILADLVEKGFVIRKRRPVYWCPHCKTTLAEAEIEYR 207


>gi|323141827|ref|ZP_08076692.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413698|gb|EFY04552.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 929

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 111/345 (32%), Gaps = 25/345 (7%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           D        Q       PV + +  G      A  D + +++E             E   
Sbjct: 455 DRHDWCISRQRVWGVPIPVFYCDNCGEHLINEATIDSVANWFEKEGSDAWWAHTAEE--- 511

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                   L         G K       IM VW D+ ++++                WP 
Sbjct: 512 -------LLPEGTVCPKCGGKHFHKESDIMDVWFDSGSSHMAVAAKRP------ELSWPV 558

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +++ G D     F +    +  ++   P    +     +   G K+SKS+GNVI P +V
Sbjct: 559 AMYLEGSDQHRGWFQSSLLTSVAVAGRAPYESVLTHGYVVDGDGRKMSKSVGNVIVPQDV 618

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDG 375
           I++ G D +R +         D       LK+   A++   I N +   +      +Y+ 
Sbjct: 619 IKQYGADIIRLWTASSDY-KADIRISPKILKQL--AEVYRKIRNTIRYILGNTNDFNYET 675

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP 433
                    E D+  L     + +E+    ++   H     + +   V     Y D  K 
Sbjct: 676 DAVPFNEMLELDQWALMHLQLLKKEVTAAYESYDFHVLYHAIHNFCTVEMSSFYLDILKD 735

Query: 434 WELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                K +     +      E++  L ++L   +     +++  +
Sbjct: 736 RLYAYKADSKERRSAQTAMHEILMDLIVMLSPVLSFTMEEVWQFM 780



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 15/196 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K  +     Y N + H+GHA   I+ D++ ++    G D  +  G D HG  I  AA  
Sbjct: 48  KKFVLHDGPPYANGKIHMGHALNKILKDIIMKYKYARGFDTPYVPGWDTHGMPIEHAAIK 107

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                               F  Q     R+    L +   +++   T           +
Sbjct: 108 ELGLNRNELDPLTLRRKCHDFALQWVDIQREDFKRLGVLGDWENPYITLHHSFEAEQIRV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
           +  +++KG IYKG  + ++    E    + E+  G           P+     +      
Sbjct: 168 FGTMANKGYIYKGKKTVYWCPHCETALAEAEIEYGEQKTPTIFVKMPLVKDNGQTPEAAK 227

Query: 170 SAYQDKLLSYYESHPE 185
                 ++        
Sbjct: 228 GKKAYMVIWTTTPWTM 243


>gi|309700239|emb|CBI99527.1| isoleucyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I    +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|257083914|ref|ZP_05578275.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256991944|gb|EEU79246.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315147954|gb|EFT91970.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
 gi|315173283|gb|EFU17300.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|256960187|ref|ZP_05564358.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293382552|ref|ZP_06628486.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387847|ref|ZP_06632386.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|312901038|ref|ZP_07760329.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
 gi|312906845|ref|ZP_07765842.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|312978900|ref|ZP_07790626.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|256950683|gb|EEU67315.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291080100|gb|EFE17464.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082694|gb|EFE19657.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627099|gb|EFQ10382.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|311288337|gb|EFQ66893.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|311291864|gb|EFQ70420.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|116333699|ref|YP_795226.1| leucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269614|sp|Q03RH7|SYL_LACBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116099046|gb|ABJ64195.1| leucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 809

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 9/205 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    +
Sbjct: 28  QTKPKYYVMDMFPYPSGQGLHVGHPEGYTATDIMARLKRMQGFNVLHPMGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   K F   N +NF+     L  SYD    I TT++ ++   + +++++  KG 
Sbjct: 88  YALKTGHNPKDFTAHNIKNFKRQIRSLGFSYDWSREINTTDESYYKWTQWIFEQLYKKGL 147

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 148 AYEDKIMVNWAPDFMGGTVVANEEVIDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 203

Query: 177 LSYYESHPEFILPIERRNEVISFVK 201
           +   +         E +   I   +
Sbjct: 204 IDDLDDLDWPDSIKEMQRNWIGRSE 228



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 115/306 (37%), Gaps = 43/306 (14%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGY 244
           LP  ++ E     +S L +L       D   +        M  W         Y+  T  
Sbjct: 455 LPAAKQLEPSGTGESPLANLDDWVNVVDENGRKGKRETNTMPQWAGSSWYFLRYVDPTND 514

Query: 245 LDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGF 295
               D  K K+W P DL++ G +    H +Y   +         +    P  K V     
Sbjct: 515 QAIADPEKLKYWMPVDLYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMI 574

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +    EK+SKS GNVI+P E++E+ G D LR + +          +  +G+         
Sbjct: 575 LGTNHEKMSKSKGNVINPDEIVEKHGADTLRLYEMFMGPLEASKPWSTEGI--------- 625

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
           NG    + R   +++ D + +          D ++  + ++ ++ + E+++    + A++
Sbjct: 626 NGSRRWLDRVWRLLIDDNNRLRDRVTMIN--DGALDKIYNQTVKTVTEDLEAMRFNVAIS 683

Query: 416 QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Q++  V+E  +                    V  + +  +     L+   VP +A +++ 
Sbjct: 684 QLMVFVNEAYK--------------------VDSLPMIYMEGFVKLISPIVPHIAEELWS 723

Query: 476 ILFVAD 481
           +L   +
Sbjct: 724 LLGHDE 729


>gi|315031711|gb|EFT43643.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|304396521|ref|ZP_07378402.1| isoleucyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356030|gb|EFM20396.1| isoleucyl-tRNA synthetase [Pantoea sp. aB]
          Length = 938

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 126/399 (31%), Gaps = 44/399 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+    A       +   VQW+ + G   
Sbjct: 395 HVEKLLHSYPHCWRHKTPIIFRATPQWFISMDQKGLRAQS---LKEIKGVQWIPDWGQAR 451

Query: 168 RLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDP 224
             S   ++          + +P+      E        L  +    +     GI+   D 
Sbjct: 452 IESMVANRPDWCISRQRTWGVPMALFVHKESEELHPDTLALMEKVAQRVEQEGIQAWWDL 511

Query: 225 Q----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                              + VW D+ +   +                P DL++ G D  
Sbjct: 512 DPRELMGDDADHYVKVPDTLDVWFDSGSTSYSVVD----ARPEFGGHAP-DLYLEGSDQH 566

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR
Sbjct: 567 RGWFMSSLMISTAMKGQAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMNKLGADILR 626

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPG 381
            ++      G+      + LK+  +A         +  +   +L +  G  P      P 
Sbjct: 627 LWVASTDYSGEMAV-SDEILKRSADA------YRRIRNTARFLLANLSGFNPVTDLVKPE 679

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +        +I  + +N   H  + +++   S      Y D  K  +   K
Sbjct: 680 EMVVVDRWAVGRAQAAQADIVASYENYDFHEVIQRLMQFCSIEMGSFYLDIIKDRQYTAK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     +       ++  L   +   +   A++I+  L
Sbjct: 740 GDGLARRSCQTALWHIVEALVRWMAPIMSFTADEIWGYL 778



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 59/206 (28%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T +       
Sbjct: 106 VEQMIGKPGEKVTAAEFRAACRKYAAEQVEGQKADFIRLGVLGDWDRPYLTMDFGTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + L   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCLDCRSALAEAEVEYYDKTSPSIDVMFNAIDADAVRGA 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSQVNGPISLVIWTTTPWTLPANR 251


>gi|255971457|ref|ZP_05422043.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256957096|ref|ZP_05561267.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077892|ref|ZP_05572253.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|255962475|gb|EET94951.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256947592|gb|EEU64224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985922|gb|EEU73224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|323480242|gb|ADX79681.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 928

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 572 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 631 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 684

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 685 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 744

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 745 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 47  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 106

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 107 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 167 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 202


>gi|229548944|ref|ZP_04437669.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229305965|gb|EEN71961.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|227555113|ref|ZP_03985160.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257418593|ref|ZP_05595587.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|307268083|ref|ZP_07549471.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|307275486|ref|ZP_07556628.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|312952725|ref|ZP_07771587.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|227175781|gb|EEI56753.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257160421|gb|EEU90381.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|306507874|gb|EFM77002.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|306515724|gb|EFM84251.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|310629241|gb|EFQ12524.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|315034232|gb|EFT46164.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
 gi|315153079|gb|EFT97095.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
 gi|315156852|gb|EFU00869.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
 gi|315157638|gb|EFU01655.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
 gi|315168031|gb|EFU12048.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
 gi|315574253|gb|EFU86444.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|315581592|gb|EFU93783.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
 gi|327534589|gb|AEA93423.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 933

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|114606509|ref|XP_001160008.1| PREDICTED: valyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114606511|ref|XP_518361.2| PREDICTED: valyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 1264

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 113/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N  +W      ++        +     + P    P  R            
Sbjct: 705  HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1060 LSPFMPFVTEELFQRL 1075



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 397 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 456

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 457 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|46908248|ref|YP_014637.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|226224616|ref|YP_002758723.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825490|ref|ZP_05230491.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854377|ref|ZP_05243725.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931813|ref|ZP_05265172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993251|ref|ZP_05275441.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521953|ref|ZP_05389190.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763676|ref|ZP_07073673.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403188|sp|Q71Y01|SYI_LISMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511508|sp|C1KWW3|SYI_LISMC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46881519|gb|AAT04814.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877078|emb|CAS05789.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258607776|gb|EEW20384.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583367|gb|EFF95399.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594732|gb|EFG02493.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515412|gb|EFK42462.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466360|gb|EGF37517.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 921

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 109/282 (38%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  A       E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNAVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ +++N +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPE 784



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 15/154 (9%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K YI      Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A  
Sbjct: 47  RKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIA 106

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
             GV  K             +        R     L I+ D      T    +      +
Sbjct: 107 KKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKV 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +++ KG IYKG    ++S   E+   + E+  
Sbjct: 167 FGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|313632954|gb|EFR99884.1| leucyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 806

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYENGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 206

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 207 DLDLVDWPENIKDMQRNWIGRSE 229



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 500 WYFLRYIDPNNTEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 559

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 560 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNE 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+              + R   +++   +         TE + ++      +++ +  
Sbjct: 620 NGLEGS---------RKFLDRIWRLLV--TEEGTLAEKVTTEPNANLEKAYHHMVKTVTN 668

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +      P                   E +     LL 
Sbjct: 669 HFENLRFNTGISQLMIFINEAYK--QDTIP------------------KEYVEGFVQLLS 708

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 709 PIAPHLAEELWEILGHTE 726


>gi|319779679|ref|YP_004130592.1| Valyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109703|gb|ADU92449.1| Valyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 957

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/489 (15%), Positives = 155/489 (31%), Gaps = 89/489 (18%)

Query: 68  TTKVFVDQNSRNFRDMADVLDI-SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           T     + N+   R   + ++I + D  I       +        + +   D+       
Sbjct: 291 TPAHDFNDNAVGQRHGLEQINIFTLDAHINENAPEKYRGLDRFDARKAVVADLELLGLLQ 350

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
                       D      +    +  +  +     EG F    +  +  L   +     
Sbjct: 351 EVKPHKLMVPRGDRTKTVIEPMLTDQWYVAMTKPAPEGTFNPGKSITEVALEVVKKGEVK 410

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP------------------------- 221
             P    N   +     ++D  +SR+   WG +IP                         
Sbjct: 411 FYPENWTNT-YNQWLENIQDWCISRQ-LWWGHQIPAWYGENGEIFVARNEEEAQQKASDS 468

Query: 222 ------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
                    + ++  W  +     TT G+ +  D    K+ P+++ V G DI+ F    +
Sbjct: 469 GYRGVLRRDEDVLDTWFSSALVPFTTMGWPEETD-DYKKYLPSNVLVTGFDIIFFWVARM 527

Query: 274 YWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE------------- 319
              +  L+  +P  K V+ HG IL   G+K+SKS GN I+P ++I+              
Sbjct: 528 IMMSMHLTGQIPF-KVVYVHGLILDAHGQKMSKSKGNTINPEDLIDGVDLETLVNKRTQG 586

Query: 320 ------------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
                                    G DALR+ +      G++  +D    +     +  
Sbjct: 587 LMNPKQASKIEKETRKDYPNGINAYGTDALRFTMATYATLGRNMNFDLKRCEG--YRNFC 644

Query: 356 NGIGNLVSRSVSMILKDYDGMIPT-------PGAFTESDESILSVCSRVLQEIRENMQNQ 408
           N + N  SR V M ++D      +              D+ I+S     L+EI +  +  
Sbjct: 645 NKLWN-ASRFVLMNVEDKPIHKYSIWDDDFDFDDIRIVDQWIISEFQLFLEEIHKGFEEY 703

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
                   +   V +   D Y +  K   L   + +  +    V ++++  +  +    +
Sbjct: 704 RFDNIANNIYKFVWDEFCDWYLELSKV-LLNTADEEEQAITRRVLIDILEGILKVAHPII 762

Query: 467 PKLANKIFD 475
           P +   ++ 
Sbjct: 763 PFITEGLWQ 771



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 23/182 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ- 63
           E   I           H+GHA+   I D L R++R++G D ++  G+D  G       + 
Sbjct: 49  EPFAIQFPPPNVTGFLHMGHAFNQTIMDGLVRYYRMNGSDTVYIPGSDHAGIATQIVVER 108

Query: 64  -------------NAGVTTKVFVDQN------SRNFRDMADVLDISYDDFIRTTEKRHHD 104
                              +V+  +N       +  R +    D S + F  T + +   
Sbjct: 109 QLDAEGVSRHDLGREKFLERVWDWKNISGGTIHKQIRKLGSSADWSREYF--TMDDQMSK 166

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK-GADGQYYNAQHNPVQWMEEE 163
                + ++ ++G IY+G     +        +D EV     DG  ++ ++   + ++  
Sbjct: 167 GVIETFVRLYEQGLIYRGKRLVNWDPVLGTAISDLEVENSEEDGHMWHIRYPLTEPVDST 226

Query: 164 GY 165
            Y
Sbjct: 227 AY 228


>gi|73947216|ref|XP_541332.2| PREDICTED: similar to Isoleucyl-tRNA synthetase, cytoplasmic
            (Isoleucine--tRNA ligase) (IleRS) (IRS) [Canis
            familiaris]
          Length = 2763

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/410 (13%), Positives = 123/410 (30%), Gaps = 29/410 (7%)

Query: 109  LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
            ++K +       +          D  Y+  + V +   G +     +             
Sbjct: 1825 IYKAVPSWFVRVEHMVDQLLQNNDLCYWVPEFVREKRFGNWLKDARDWAVSRNRYWGTPI 1884

Query: 169  LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                 D             L      +V    +  +  L++       G  +      + 
Sbjct: 1885 PLWVSDDFEEVVCIGSVAELEELTGAKVSDLHRESIDHLTIPS---HCGKGVLRRISEVF 1941

Query: 229  YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPL 286
              W ++ +       Y           +PAD    G D     F+ +   A  L    P 
Sbjct: 1942 DCWFESGSMPYAQVHYPFENKREFDDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPF 2001

Query: 287  PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDG 345
               + +   +   G+K+SK   N  DP+ +I + G DALR +L+       ++  + ++G
Sbjct: 2002 RNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEG 2061

Query: 346  LKKRVNADL---ANGIGNLVSRSVS----------------MILKDYDGMIPTPGAFTES 386
            ++  +   L    N     +   +                    ++ + +     A   +
Sbjct: 2062 VRDVLKDVLLPWYNAYRFFIQNVLRLQKVWVNVQIDAIIVTFQEEEMEFIYNENTARESA 2121

Query: 387  ---DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPD 442
               D  +LS    ++      M    ++  + +++  V    + Y    +     +   +
Sbjct: 2122 NVTDRWVLSCMQSLVGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVE 2181

Query: 443  RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
               T L     V+  L  L+  + P L   ++  L +  +    Q  D +
Sbjct: 2182 DCVTALETLFSVLLSLCRLMAPYTPFLTELMYQNLKLLIDPVSVQDKDTQ 2231



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2    KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
            K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 1408 KHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 1467

Query: 60   ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                     +  V + S  ++     L   I +D+  +T   + 
Sbjct: 1468 IDKTLGIRGPEDVAKMGIVEYNNQCRAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQF 1527

Query: 103  HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 1528 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 1571


>gi|260943127|ref|XP_002615862.1| hypothetical protein CLUG_04744 [Clavispora lusitaniae ATCC 42720]
 gi|238851152|gb|EEQ40616.1| hypothetical protein CLUG_04744 [Clavispora lusitaniae ATCC 42720]
          Length = 1081

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 106/264 (40%), Gaps = 11/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         K +PA+    G D     F+ +      L  
Sbjct: 524 EEVFDCWFESGSMPYASQHYPFERQDVFHKAFPANFISEGLDQTRGWFYTLTVLGTHLFN 583

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + S   +   G+K+SK L N  DP  V+E+ G DALR +L+       +   +
Sbjct: 584 TAPYQNVIVSGIVLAADGKKMSKRLKNYPDPTIVLEKYGADALRLYLINSPVLRAETLKF 643

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
            ++G+++ V++ L         +  +  +  K+        P+  +    D  +L+    
Sbjct: 644 KEEGVREVVSSVLLPWYNSFKFLKDAADLFKKENGADFVYDPSLASENVMDRWLLAAIQS 703

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNP--DRASTVLYVTVE 453
           +++ + E MQ   ++  + +++ L+  + + Y    +      T+   +     L    E
Sbjct: 704 LVKFVHEEMQAYRLYTVVPKLLGLIDNLTNWYIRLNRSRIKGDTDGGLEDTKKGLNTLTE 763

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L+ L+  F P LA+ I+  L
Sbjct: 764 ALFILSRLMAPFTPFLADGIYQRL 787



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           ++  +        +    PH GH     + D++ R+  ++G  V    G D HG  +  +
Sbjct: 36  QDLPRFAFFDGPPFATGTPHYGHILASTVKDIIPRYATMNGFHVERRFGWDTHGLPVEHE 95

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +  G+T K                     + D+  R  R +   +D+  D   +T   
Sbjct: 96  IDKKLGITGKEDVMKMGIDKYNAECRSIVMRYADEWRRTIRRLGRWIDMDNDY--KTLYP 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++    +K++  K  +YKG     YS       ++ E  +   
Sbjct: 154 EFMESVWWAFKELYKKDAVYKGLRVMPYSTGCTTPLSNFEAQQNYK 199


>gi|150404043|gb|ABR68335.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404047|gb|ABR68337.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404051|gb|ABR68339.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404053|gb|ABR68340.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404055|gb|ABR68341.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404057|gb|ABR68342.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404061|gb|ABR68344.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404065|gb|ABR68346.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404073|gb|ABR68350.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404075|gb|ABR68351.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404077|gb|ABR68352.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404079|gb|ABR68353.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404081|gb|ABR68354.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404087|gb|ABR68357.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404093|gb|ABR68360.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404095|gb|ABR68361.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404097|gb|ABR68362.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404117|gb|ABR68372.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404119|gb|ABR68373.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 120


>gi|134093543|ref|YP_001098618.1| valyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166225522|sp|A4G1V2|SYV_HERAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|133737446|emb|CAL60489.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Herminiimonas
           arsenicoxydans]
          Length = 969

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 95/402 (23%)

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IK 219
            EG  F   +  +  L    S    +LP    N   +   + ++D  +SR+   WG  I 
Sbjct: 389 PEGTHFPGKSITEVALEKVASGEVKLLPENWANT-YNQWLNNIQDWCISRQ-LWWGHQIP 446

Query: 220 IPDD-----------------------------PQYIMYVWIDALTNYLTTTGYLDNPDG 250
              D                              + ++  W  +     +T G+ +    
Sbjct: 447 AWYDSEGKVYVARNEEEARTKAAAQGYHGPLTRDEDVLDTWFSSALVPFSTLGWPEETP- 505

Query: 251 SKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
               F P+ + V G DI+ F    +       +  +P              G+K+SKS G
Sbjct: 506 DFKNFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFNTVYVHGLIRDSSGQKMSKSKG 565

Query: 309 NVIDPIEVIEE-------------------------------------VGVDALRYFLVR 331
           N +DPI++I+                                       G DALR+ +  
Sbjct: 566 NTLDPIDLIDGISVEDLVAKRTVGLMNPKQAASIEKATRKEYPNGIAAYGTDALRFTMAS 625

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP----------- 380
             + G++  +D    +     +  N + N  +R V M  +  D                 
Sbjct: 626 YASLGRNINFDLHRCEG--YRNFCNKLWN-ATRFVLMNCEGQDCGFRDAPCAAGDCAVDG 682

Query: 381 -----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
                  F+++D  I+S   R   +I +   +       + +   + +   D Y +  K 
Sbjct: 683 KAGGYTDFSQADRWIVSKLQRTETDIAKGFADYRFDNIASSLYQFIWDEYCDWYLEVAKV 742

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                T   + +T     + V+  +  L    +P +  +++ 
Sbjct: 743 QIQTGTEAQQRAT-RRTLLRVLETILRLAHPVIPFITEQLWQ 783



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 22/175 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
           ++    I           H+GH +   I D L R+HR+ G +  +  GTD  G       
Sbjct: 33  DKPSFSIQLPPPNVTGTLHLGHGFNQTIMDGLTRYHRMRGFNTAWIPGTDHAGIATQIVV 92

Query: 60  ------KAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRH 102
                 +      +  + F+++                R +    D S + F  T ++  
Sbjct: 93  ERQLDAQKITRHDLGREKFIEKVWEWKEKSGSTITGQMRRLGTSPDWSREYF--TMDEPR 150

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++ ++ ++G IY+G     +        +D EV    +  +      P+
Sbjct: 151 SKVVTEVFVRLVEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGHMWNIRYPL 205


>gi|291550834|emb|CBL27096.1| leucyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 810

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH    +I+DV +R+    G  ++   G D  G      
Sbjct: 35  KKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLQQGYYIVHPMGWDAFGLPAENY 94

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV      + N  N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 95  AIKMGVHPAKSTEANITNIKRQINDIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 154

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y D+LL+ 
Sbjct: 155 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGAEVTKKNLRQWMLRITKYADRLLND 210

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 211 LDKLDWPEKVKKMQADWI 228



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 93/237 (39%), Gaps = 40/237 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            +  P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 529 DEMLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFHKLFNQGMITGKNGIKMS 588

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G+           + N++  
Sbjct: 589 KSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGIDGVNR--FLKRLWNIL-- 644

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              M  K+ D             + ++ +  R++ +I   +++  ++  ++  +      
Sbjct: 645 ---MESKEKDVQPT---------KEMIKLRHRMVYDITTRLESFSLNTVISGFMEYN--- 689

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +++ +  K    K+   D+         E +  +A+LL  F P  A ++++ L   +
Sbjct: 690 NKFMEIAK----KEGGIDK---------ETLETIAVLLSPFAPHFAEEMWEQLGHEE 733


>gi|148878499|sp|Q4A8Y0|SYI_MYCH7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144575246|gb|AAZ53409.2| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 886

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 23/295 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++       + P        P D++  G D     F++    + 
Sbjct: 512 WTKENDILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSV 563

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P  K +     +  KG K+SKS GN +DP+ ++ + G D  R ++        D
Sbjct: 564 IYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANSEY-YND 622

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y +   ++  N ++   I N    +V  ++ +     P     TE D  I +   ++ 
Sbjct: 623 IVYSEAIFEQ--NVEIYRKIRN----TVRFLITNLADFKPKKYELTEVDLYIFNKIQKLK 676

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
            EI +N       R +  + + + E  + Y    K      K    +   V Y   E+++
Sbjct: 677 NEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQ 736

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF---MLHKTFDPIFP 508
            L I +   +P  A +I+  +   ++      +++  K       L   +D  F 
Sbjct: 737 VLNIAIAPIMPTTAEEIYSFIQKNNKQISV-HMEEFFKESHFDEELVAKWDEFFQ 790



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 48  RGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENK 107

Query: 62  AQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             N   +            F +            L++   +    +T    +      L+
Sbjct: 108 IINQIGSKSTLEIRRKSNDFANSQILAQMAQFKKLNLLTDFKQIYQTNTPNYEAKQLKLF 167

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           KK+  +G +Y+     ++S   ++   + E+  
Sbjct: 168 KKMVSRGLVYRALKPVYWSPSSQSALAEAEIEY 200


>gi|328947503|ref|YP_004364840.1| leucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447827|gb|AEB13543.1| leucyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 888

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            + ++ YI     YP+    H+GH       D+ +R+ R++G +VL   G D  G     
Sbjct: 32  SKEKRRYILDMFPYPSGAGLHVGHPEGYTATDIYSRYLRMNGYNVLHPMGYDSFGLPAEN 91

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N  NF      L  SY  D  + T E  ++   + ++ ++  KG 
Sbjct: 92  YAIKTGTHPSITTNANIANFTRQIKALGFSYDWDRCVSTCEPEYYKWTQWIFLQLYKKGL 151

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         ++EV +G            V       +  +++ Y ++LL 
Sbjct: 152 AYEAATPINWCPSCLTGLANEEVKEG----RCERCGAVVTRKTIRQWILKITDYAERLLE 207

Query: 179 YYESHPEFILPIERRNEVI 197
             +           +   I
Sbjct: 208 DLDLLDWPESVKLMQKNWI 226



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 72/481 (14%), Positives = 148/481 (30%), Gaps = 98/481 (20%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V    G ++ G ++ +AA       K  VD +   F    +           T+ K  + 
Sbjct: 376 VSLGGGDEKKGAELLQAASKNPEEYKKLVDAHPEIFCVANEC----------TSAKDGYS 425

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                    S K  I +           +A  N          Q Y  +  P+   E+ G
Sbjct: 426 INSEFITGKSTKDAIQEMIKFLEEKKCGKATVNYKLRDWIFSRQRYWGEPIPLVHCEKCG 485

Query: 165 YFFRLSAYQDKLLSY---YESHPEFILPIERRNEVIS--FVKSGLKDLSLSRKTFDWGIK 219
                       L     Y+       P+      ++    K G K    +     WG  
Sbjct: 486 CVPVPEKDLPVKLPDVKSYQPTGTGESPLAAIESWVNTTCPKCGGKAKRETNTMPQWG-- 543

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
                             YL      +     K ++W P DL+V G +    H +Y   +
Sbjct: 544 ----------GSCWYYLRYLDPKNNSEFCSKEKEEYWMPVDLYVGGAEHAVLHLLYARFW 593

Query: 279 L--------LSANLPL------------------PKKVFSHGFILHKGE----------- 301
                    +S   P                      V +       G+           
Sbjct: 594 HKVLYDIGAVSTKEPFHRLINQGLITSFAFQRKNKTLVPTDEVEEKDGKYFEKATGEQVE 653

Query: 302 ----KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKSL NV++P E+I++ G D++R + +          ++  GL          G
Sbjct: 654 QIIAKMSKSLKNVVNPDEMIQKYGADSVRMYEMFMGPLTVSKPWNTQGLV---------G 704

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           I   + +  ++  K  D +        ++  ++    ++ ++++ E+  +   + A++Q+
Sbjct: 705 INRFLEKVWNISEKPMDEIDIKGKLEDKALVALRKTFAQTIKKVTEDTSSLSFNTAISQM 764

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  ++E  ++                      +  E+ +   ++L  + P L  +++  L
Sbjct: 765 MIFINEASKF--------------------NSLPKEMWKDFVLILSPYAPHLGEELWQKL 804

Query: 478 F 478
            
Sbjct: 805 G 805


>gi|238028413|ref|YP_002912644.1| isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877607|gb|ACR29940.1| Isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 945

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +              A  +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDALQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKALLTHGFTVDGEGRKMSKSLGNGIDPHEVSNRLGAEIVRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAAEWLEIDRYAIAFSAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + PD A+  +       V + L 
Sbjct: 722 HYERYEFHPIVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSAARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            +L  F+   A + + +   A +
Sbjct: 781 RVLAPFLSFTAEEAWKVFQPASD 803



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 55  GRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQI 114

Query: 63  QNA 65
           +  
Sbjct: 115 EKQ 117


>gi|88807987|ref|ZP_01123498.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788026|gb|EAR19182.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 968

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/319 (19%), Positives = 108/319 (33%), Gaps = 40/319 (12%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                +  L   + + +   W           M VW D+ ++      +       +A  
Sbjct: 528 WWEKAEVDLLPPAYADQADQW-----RKGTDTMDVWFDSGSS------WAAVSSQREALS 576

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PADL++ G D     F +    +  ++   P  + +     +  KG K+SKSLGNV+DP
Sbjct: 577 YPADLYLEGSDQHRGWFQSSLLTSVAVNGKAPYKRVLTHGFALDEKGRKMSKSLGNVVDP 636

Query: 314 IEV---------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           + +             G D LR ++           Y  D             +   V  
Sbjct: 637 MVIIEGGKNQKQEPPFGADVLRLWVSS-------VDYSADVPIGAGILRQIADVYRKVRN 689

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +   +L +     P   A         D  +L   + V+ EI E+ +N    R    + +
Sbjct: 690 TSRYLLGNLHDFSPERDAIAVADLPLLDRWMLQRTAEVMDEITESFENYEFFRFFQLLQN 749

Query: 420 LV--SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                  + Y D  K        +  R  +   V   +I +LA L+   +  +A  I+  
Sbjct: 750 FCVTDLSNFYLDIAKDRLYVSAPSDQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQN 809

Query: 477 LFVADENRCFQSLDQRLKP 495
           L    E     S+ QR  P
Sbjct: 810 LPYPVEET---SVFQRGWP 825



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N   H+GHA   ++ DV+ ++  L G  V +  G D HG  I      
Sbjct: 59  PPFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLQGRRVRYVPGWDCHGLPIELKVLQ 118

Query: 65  AGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           +    +               +  +             I   ++    T +K +      
Sbjct: 119 SMDPEQRQALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKEYEAAQIK 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++  KG IY+G     +S        + E+  
Sbjct: 179 VFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEY 213


>gi|145637267|ref|ZP_01792928.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269519|gb|EDK09461.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 941

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 148/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 352 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHK 411

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 412 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 471

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----------------I 227
            +P+      E        L  L    K     GI+   D                    
Sbjct: 472 GVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGVDAETYRKVPDT 531

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +    +  P
Sbjct: 532 LDVWFDSGSTYSSVVANRPEFNGHDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 644

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   ++       E
Sbjct: 645 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNE 699

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 700 IKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADCLARRSCQTALWHIAEA 759

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++I+  L   +  R 
Sbjct: 760 LVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGSIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              PV+  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPVESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|313637568|gb|EFS02978.1| leucyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 803

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SYD    I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWEREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPNNTEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 557 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRMYEMFMGPLEASIAWNE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+              + R   +++   +         TE + ++      +++ +  
Sbjct: 617 NGLEGS---------RKFLDRIWRLLV--TEEGTLAEKVTTEPNANLEKAYHHMVKTVTN 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +      P                   E +     LL 
Sbjct: 666 HFENLRFNTGISQLMIFINEAYK--QDTIP------------------KEYVEGFVQLLS 705

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 706 PIAPHLAEELWEILGHTE 723


>gi|296813547|ref|XP_002847111.1| isoleucyl-tRNA synthetase,cytoplasmic [Arthroderma otae CBS 113480]
 gi|238842367|gb|EEQ32029.1| isoleucyl-tRNA synthetase,cytoplasmic [Arthroderma otae CBS 113480]
          Length = 1040

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 13/277 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 481 EEVFDCWFESGSMPYASQHYPFKNKERFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 540

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V++  G D LR +L+       +   +
Sbjct: 541 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGVVMDRYGSDPLRLYLINSPVVRAEPLRF 600

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D +       T     D  IL+ C
Sbjct: 601 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENIDYVFDPAAEATNTNVMDRWILASC 660

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 661 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 720

Query: 454 VIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
           V+  L   L  F P + + I+  L   + ++ R   S
Sbjct: 721 VLYTLVRGLAPFTPFITDTIYLRLLPHIPEQLRGEDS 757



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V + S  +R   D L   I +D+  +T +   
Sbjct: 90  IDKMLGMSGSEAVQKIGLAAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKTMDTTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 150 MESIWWILKQLFEKGAVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|225850238|ref|YP_002730472.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
 gi|259511511|sp|C0QP76|SYI_PERMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225645021|gb|ACO03207.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
          Length = 947

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 114/345 (33%), Gaps = 13/345 (3%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + ++ +    + +          W      F+               H   ++  +    
Sbjct: 445 WGENRIKSMIENRPDWCISRQRSWGVPIAVFYCKRCGNIIDDEKVFEHIADLVEKDEFGA 504

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            I F +   + L    +      +     + I+ VW D+  ++ +               
Sbjct: 505 DIWFEREAEELLPEGYRCPKCDGEEFKKEEDILDVWFDSGVSHASVLKSGFW----DELK 560

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           WPAD+++ G D     F +            P    +     +  KG K+SKSLGNVI P
Sbjct: 561 WPADMYLEGSDQHRGWFQSSLLEGVASYGRAPYDAVLTHGFILDEKGNKMSKSLGNVIPP 620

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-D 372
            ++I+  G D LR ++V E    +D     + LK    AD    I N     +  +   D
Sbjct: 621 EKIIKMYGADILRLWVVSEDY-TEDIKIGMNLLKSI--ADDYRKIRNTFRYFLGNLYDFD 677

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDA 430
            +          E D  +LS   R++        N   H+   ++    +V     Y D 
Sbjct: 678 ANKDRVPYENLLEIDRWMLSKLQRLIDRSHSAYSNYRFHKIYHEIKRFVIVDLSAVYLDI 737

Query: 431 QKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            K    +   +     +   V  E++  L  LL   +     +I+
Sbjct: 738 LKDRLYVYAPDSLERRSAQTVLYELLDSLTKLLAPILSFTTEEIW 782



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +EK  +     Y N   H+GHA   I+ D+L ++  + G D  F  G D HG  I + 
Sbjct: 45  KGKEKYILHDGPPYANGNIHLGHALNKILKDILVKYESMKGKDAPFVPGWDCHGLPIEQQ 104

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                      + +  +     R+    L I  +++    T    + 
Sbjct: 105 VEKLLKKEKKRKEDLSKSEFRKLCREYALKYVNIQREEFKRLGIIGNWEKPYLTMRPSYQ 164

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                   KI  KG  Y+G    ++ + D+    + EV  
Sbjct: 165 AQEIRELGKIFRKGIAYRGKKPVYWCIYDKTAEAEAEVEY 204


>gi|16803700|ref|NP_465185.1| leucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224503674|ref|ZP_03671981.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254898173|ref|ZP_05258097.1| leucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|29336552|sp|Q8Y6M4|SYL_LISMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16411096|emb|CAC99738.1| leucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 803

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 557 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 617 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 666 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 705

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 706 PIAPHLAEELWEILGHTE 723


>gi|225349702|gb|ACN87776.1| MetRS [Lactobacillus casei]
          Length = 211

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|150404101|gb|ABR68364.1| methionyl-tRNA synthetase [Lactobacillus casei]
 gi|150404105|gb|ABR68366.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|72080374|ref|YP_287432.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 887

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 23/295 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++       + P        P D++  G D     F++    + 
Sbjct: 513 WTKENDILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSV 564

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P  K +     +  KG K+SKS GN +DP+ ++ + G D  R ++        D
Sbjct: 565 IYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANSEY-YND 623

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y +   ++  N ++   I N    +V  ++ +     P     TE D  I +   ++ 
Sbjct: 624 IVYSEAIFEQ--NVEIYRKIRN----TVRFLITNLADFKPKKYELTEVDLYIFNKIQKLK 677

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
            EI +N       R +  + + + E  + Y    K      K    +   V Y   E+++
Sbjct: 678 NEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQ 737

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF---MLHKTFDPIFP 508
            L I +   +P  A +I+  +   ++      +++  K       L   +D  F 
Sbjct: 738 VLNIAIAPIMPTTAEEIYSFIQKNNKQISV-HMEEFFKESHFDEELVAKWDEFFQ 791



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 49  RGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENK 108

Query: 62  AQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             N   +            F +            L++   +    +T    +      L+
Sbjct: 109 IINQIGSKSTLEIRRKSNDFANSQILAQMAQFKKLNLLTDFKQIYQTNTPNYEAKQLKLF 168

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           KK+  +G +Y+     ++S   ++   + E+  
Sbjct: 169 KKMVSRGLVYRALKPVYWSPSSQSALAEAEIEY 201


>gi|289522932|ref|ZP_06439786.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503956|gb|EFD25120.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 927

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 17/274 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K       I  VW D+ T+++                WPA +++ G D     F      
Sbjct: 521 KSLRKETDIFDVWFDSGTSHMAVLTTRP------ELKWPATMYLEGSDQHRGWFQTSLLT 574

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +       P    +     +  +G K+SKSLGNV+ P EVI + G D LR ++       
Sbjct: 575 SVATRGRAPFEMVLTHGFIVDGEGRKMSKSLGNVVQPQEVIGKYGADILRLWVASTDY-R 633

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVC 394
            D    +  L  R   +    I N + R +   L D+D    +       E D  ILS  
Sbjct: 634 NDIRISETIL--RNLVESYRRIRNTL-RYILGNLSDFDPHKDSVPFEEMEEMDLWILSKL 690

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPW-ELKKTNPDRASTVLYVT 451
             V+ ++ +  +N   H     +  L V+E+   Y D  K    ++ ++     +     
Sbjct: 691 QGVISKVTKGFENFEFHVPTFTIHQLCVNELSAFYLDVNKDRLYVEASDSKLRRSCQTAL 750

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
             +I++L ++L   +   + +++  L   D +  
Sbjct: 751 WNIIKELTLMLSPILSFTSEEVWQYLRQIDNSLS 784



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 18/161 (11%)

Query: 1   MKER---EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           M++R   E   +     Y N   HIG A+  I+ D++ ++  + G    +  G D HG  
Sbjct: 43  MEKRRGAEPFILHDGPPYANGNIHIGTAFNKILKDMIPKYKWMRGYFSPYVPGWDTHGLP 102

Query: 58  IAKAA------QNAGVTTKV-------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRH 102
           I              +           + ++     RD    L +  D      T +  +
Sbjct: 103 IELRTLKDEGLDKDSLHPIELRKKCMQYAERYIDVQRDEFKRLGVIGDWENPYITFKSEY 162

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                  + ++ D G +Y+G    ++    +      E+  
Sbjct: 163 EAIELEAFAEMVDHGYVYRGQKPIYWCTDCQTALAAAEIEY 203


>gi|225349682|gb|ACN87766.1| MetRS [Lactobacillus casei]
          Length = 211

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 120


>gi|257465710|ref|ZP_05630081.1| isoleucyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451370|gb|EEV25413.1| isoleucyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 938

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 79/480 (16%), Positives = 149/480 (31%), Gaps = 59/480 (12%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTE-- 99
             V F  G  +H                   D        +     ++ D  F+ TT   
Sbjct: 314 YSVPFILG--DHVTTDGGTGLVHTAPDHGLDDYIVGQKYKLEMACLVANDGKFVSTTPFF 371

Query: 100 --KRHHDTCRILWKKISDKG-----DIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYN 151
             K   ++  ++ +K+ + G     +  K  Y   +  +    +    + + G + Q   
Sbjct: 372 AGKGVFESNDLVLEKLKETGALLKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLR 431

Query: 152 AQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLK 205
            Q       V+W+   G     +   ++          + +P+     NE        L+
Sbjct: 432 KQALGEIKRVRWIPSWGEARIDTMVANRPDWCISRQRTWGVPMTMFVHNETEQLHPRTLE 491

Query: 206 DLSLSRKTF-DWGIKIPDDPQ-----------------YIMYVWIDALTNYLTTTGYLDN 247
            L    K     GI+   D                     + VW D+ + Y +       
Sbjct: 492 ILEEVAKRVEQAGIQAWWDLDPKEVLGEEDAKIYRKVPDTLDVWFDSGSTYASVVQQRPE 551

Query: 248 PDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +G+      AD+++ G D     F +    +       P  + +     +  KG K+SK
Sbjct: 552 FNGNS-----ADMYLEGSDQHRGWFMSSLMLSTATDNKAPYNQVLTHGFTVDEKGRKMSK 606

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNVI P EV  + G D LR ++           Y  +        + A      +  +
Sbjct: 607 SLGNVILPSEVWNKNGADILRLWVAS-------TDYTGEIAVSHNILNSAGDTYRRIRNT 659

Query: 366 VSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              +L + +G  P      P      D   +S       +I+E   N   H  + +++  
Sbjct: 660 ARFLLANLNGFDPKRDLVKPEEMIALDRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRF 719

Query: 421 VSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            S      Y D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 720 CSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHISEALVRWMAPILSFTADEIWGYL 779



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 61/207 (29%), Gaps = 16/207 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHLGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRQECRKYAAEQVEGQKADFIRMGVLGDWDNPYLTMNFNTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            + + V     E  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFSAVDPAAVEAK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
           F        ++ +   +   + LP  R
Sbjct: 226 FNAQGKGSGQISAVIWTTTPWTLPSNR 252


>gi|256761761|ref|ZP_05502341.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683012|gb|EEU22707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 928

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 572 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 631 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTLR 684

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 685 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 744

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 745 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 47  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 106

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 107 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 167 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 202


>gi|258611616|ref|ZP_05234151.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258601879|gb|EEW15204.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 841

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 185

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 186 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 241

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 242 DLDLVDWPENIKDMQRNWIGRSE 264



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 535 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 594

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 595 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 654

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 655 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 703

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 704 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 743

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 744 PIAPHLAEELWEILGHTE 761


>gi|325577254|ref|ZP_08147738.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160836|gb|EGC72957.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 941

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 72/441 (16%), Positives = 148/441 (33%), Gaps = 56/441 (12%)

Query: 89  ISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYN 137
           +S D  FI TTE          +       +++ +   + K  +S  +  R +    +  
Sbjct: 359 VSNDGKFISTTEFFAGKGVFEANPLVVEKLQEVGNLLKVEKIKHSYPHCWRHKTPIIFRA 418

Query: 138 DDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--E 191
             + + G + Q    Q       V+W+ + G        +++          + +P+   
Sbjct: 419 TPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPMTLF 478

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDW-GIKIPDDPQY----------------IMYVWIDA 234
              E        L+ L    K  +  GI+   D                    + VW D+
Sbjct: 479 VHKETEELHPRTLELLEEVAKRVEKAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDS 538

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
            + Y +        +G        D+++ G D     F +    +    +  P  + +  
Sbjct: 539 GSTYSSVVANRPEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTH 593

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  + KR   
Sbjct: 594 GFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE--ILKR--- 648

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQN 407
             A      +  +   +L + +G  P      P      D   ++      +EI++   N
Sbjct: 649 --AADSYRRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKDAYDN 706

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQA 464
              H  + +++   S      Y D  K  +   K +     +       +   L   +  
Sbjct: 707 YQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAP 766

Query: 465 FVPKLANKIFDILFVADENRC 485
            +   A++I+  L      R 
Sbjct: 767 ILSFTADEIWGYLPQTATPRA 787



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKITAAEFRKKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGY 165
                K+   G +YKG     + L   +   + EV              P V  +E E  
Sbjct: 167 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAVSAVEIEEK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FNAVGKGHGKLSAVIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|170768583|ref|ZP_02903036.1| isoleucyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122687|gb|EDS91618.1| isoleucyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 938

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKELLGDDADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEDMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 62/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F  S     +     +   + LP  R
Sbjct: 226 FGASNVNGPISLVIWTTTPWTLPANR 251


>gi|89093564|ref|ZP_01166512.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082254|gb|EAR61478.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 938

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 124/388 (31%), Gaps = 27/388 (6%)

Query: 107 RILWKKISDK--GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +  +          IY+     + S+ ++               +     N ++ M E+ 
Sbjct: 403 QHSYPHCWRTKTPLIYRATPQWFVSMEEKGLKKGALEAIKGVEWFPGWGQNRIEAMVEQS 462

Query: 165 YFFRLSAYQDK------LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
             + +S  +         +           P       +   K G+            G 
Sbjct: 463 PDWCVSRQRTWGVPIALFIHKETQQLHPNTPELIEKVALEVEKVGMDAWFDLDAKELLGD 522

Query: 219 KIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           +     +    + VW D+   + +               +PAD+++ G D     F +  
Sbjct: 523 EADQYEKVTDTLDVWFDSGVTHYSVID------QRDNLEFPADMYLEGSDQHRGWFQSSL 576

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                +    P  + +     +  +G K+SKS+GNV+ P EV+ + G D LR ++     
Sbjct: 577 KTGIAIKGCAPYKQVLTHGFTVDGQGRKMSKSVGNVVAPQEVMNKYGADILRLWVASTDY 636

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAFTESDESILS 392
            G+      D + KR  AD    I N   R     L  +D    +  P      D   + 
Sbjct: 637 SGEMTCS--DDILKRA-ADAYRRIRNTA-RFFLANLSGFDPAQHMVKPEEMVALDAWAVD 692

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLY 449
             +R+ +E+ E+       +   +V    S+     Y D  K  +    T+     +   
Sbjct: 693 RAARLQEELVEHYNQYEFLQVFQKVSHFCSQDMGGFYLDIIKDRQYTAATDSQARRSAQT 752

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               ++  L   +       A++I+  L
Sbjct: 753 ALYHIVEGLVRWIAPICSFTADEIWKTL 780



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 26/64 (40%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRNKFTLHDGPPYANGDIHIGHAVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIEHKV 106

Query: 63  QNAG 66
           +   
Sbjct: 107 ETKH 110


>gi|47097505|ref|ZP_00235046.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|293596567|ref|ZP_05262346.2| leucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|47014120|gb|EAL05112.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|293590315|gb|EFF98649.1| leucyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 841

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGL 185

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 186 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 241

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 242 DLDLVDWPENIKDMQRNWIGRSE 264



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 535 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 594

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 595 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 654

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 655 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 703

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 704 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 743

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 744 PIAPHLAEELWEILGHTE 761


>gi|254832063|ref|ZP_05236718.1| leucyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 803

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 557 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 617 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 666 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 705

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 706 PIAPHLAEELWEILGHTE 723


>gi|15673845|ref|NP_268020.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537525|sp|Q9CEH8|SYI_LACLA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12724895|gb|AAK05961.1|AE006416_6 isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 932

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 109/279 (39%), Gaps = 29/279 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSS------WNGVLNERDYLSFPADLYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KG K+SKS+GN I P +V ++ G D LR ++        D
Sbjct: 570 AVNGVAPYKAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLWVASIDTE-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +       + +   +  ++  ++ +     P   A         D+ +L  
Sbjct: 629 VRVSMDILSQ------VSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDR--ASTV 447
            + ++++IR    N         +I+ +       Y D  K     +   +P+R    TV
Sbjct: 683 FNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTV 742

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +YV   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 743 MYV---ILKDLVKILVPILPHTAEETWTYLEHEPENFAY 778



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG+  K             +  +     R     L +   +D    T    +     
Sbjct: 105 LAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEY 200


>gi|87301916|ref|ZP_01084750.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283484|gb|EAQ75439.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 997

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 106/320 (33%), Gaps = 41/320 (12%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA---------KFWPADLHVIGKDIL--R 269
                  M VW D+ +++    G L   D S             +PADL++ G D     
Sbjct: 550 WRKGTDTMDVWFDSGSSWAGVLGGLHAGDASGQAPVAAEATPLRYPADLYLEGSDQHRGW 609

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP---------IEVIEEV 320
           F +    +  ++ + P  + +     +  KG K+SKSLGNV+DP          +     
Sbjct: 610 FQSSLLTSVAVNGHAPYRRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKNEKQQPAY 669

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G D LR ++           Y  D             +   V  +   +L +     P P
Sbjct: 670 GADVLRLWVSS-------VDYSADVPLGPGIVKQLADVTRKVRNTARYLLGNLHDFDPRP 722

Query: 381 GA----------FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
            A              D  +L   + +++ +  + +    +R    + +   V   + Y 
Sbjct: 723 AAEGGDAVAIADLPLLDRWMLERTASLIEAVSADFERYEFYRFFQALQNFCVVDLSNVYL 782

Query: 429 DAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCF 486
           D  K         D R  +   V   V+ +LA L+   +  +A  I+  L     E   F
Sbjct: 783 DIAKDRLYVSGASDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYPVAERSVF 842

Query: 487 QSLDQRLKPGFMLHKTFDPI 506
           +         +      +P+
Sbjct: 843 ERGWPTAAASWGEAALVEPL 862



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 16/147 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-------AQNA 65
             Y N   H+GHA   I+ D+L ++  L G    F  G D HG  I          A+ +
Sbjct: 60  PPYANGPLHVGHALNKILKDILNKYALLRGRRARFVPGWDCHGLPIELKVLQSLSSAERS 119

Query: 66  GVTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
            +T          +  +     +       I   ++    T  K +      ++ ++   
Sbjct: 120 ALTPIDLRRRAHAYALEQVEGQKAGFRRWGIWADWEQPYLTLNKAYEAAQIGVFGRMVLA 179

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           G IY+G     +S        + E+  
Sbjct: 180 GHIYRGLKPVHWSPSSRTALAEAELEY 206


>gi|224007929|ref|XP_002292924.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220971786|gb|EED90120.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1056

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 72/458 (15%), Positives = 145/458 (31%), Gaps = 36/458 (7%)

Query: 41  DGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD-----MADVLDISYDDFI 95
            G D       D +G    +  +  G+  K   D   +  +D       D LD SY    
Sbjct: 358 KGND--LPCPVDSNGMFTEQVPEVKGLHVKKADDNLIKLIKDKGRLVQKDNLDHSYPFCW 415

Query: 96  RTTEKRHHDTCRILWKKISDKGDIY----KGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           R+     +      + K+ +  D      K  Y     +++  +++     +        
Sbjct: 416 RSDTPLIYKAVPSWFIKVEEIRDRIVENNKKTYWVPNQVKEGRFHSWLTDARDWAVSRNR 475

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
               P+     E     +       L+         L  +  +++    K          
Sbjct: 476 FWGTPIPIWCNEDMTEVVCIGSVDELAELSGVRVDDLHKDVVDKITIPSKKNPGTELHRV 535

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                          +   W ++ +       Y           +PAD    G D     
Sbjct: 536 -------------DEVFDCWFESGSMPYAQMHYPFENKEKFENGFPADFIAEGLDQTRGW 582

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L         + +   +   G+K+SK L N  DP  VI + G DALR +L
Sbjct: 583 FYTLMVLSTALFDKPAFKNLIVNGLVLASDGKKMSKRLKNYPDPNVVISKYGADALRMYL 642

Query: 330 VREIACGKDGFYDKD----GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-- 383
           +       +    ++    G+ K V   L N     V  +     K+    +P+      
Sbjct: 643 INSPVVRAESLKFQESGVLGVVKEVFLPLYNAFRFFVQNTERWEAKNGSKFVPSKEKVQS 702

Query: 384 --TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTN 440
               +D  I +    +++ + E M    ++  +  ++S V+++ + Y    +        
Sbjct: 703 TANPTDVWISAATQGLIKFVHEEMAAYRLYTVMPALVSFVTQLTNWYVRLNRDRLKGLEG 762

Query: 441 PD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  + T L V  +V+  + IL+  F P +    +  L
Sbjct: 763 GESESETGLQVLYDVLLDVTILMAPFTPFITEYFYQHL 800



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 23/149 (15%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAAQNAGVTTKV 71
             +    PH GH     I DV+ R+       V    G D HG  +  +  Q   +T + 
Sbjct: 47  PPFATGLPHYGHILAGTIKDVVTRYACQTSHHVSRRAGWDCHGLPVEYEIDQKLNITHRD 106

Query: 72  --------------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                               +  +       +   +D   D   +T +    ++   +++
Sbjct: 107 QVLEMGVDKYNETCRGIVSRYTKEWETTVTRLGRWIDFENDY--KTMDPTFMESVWWVFQ 164

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           ++ +KG +Y+G     +S       ++ E
Sbjct: 165 QLFEKGLVYQGYKVMPFSTACGTPLSNFE 193


>gi|331701630|ref|YP_004398589.1| leucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128973|gb|AEB73526.1| leucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 806

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 17/246 (6%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + +++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    
Sbjct: 27  VADKDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMKRMQGKNVLHPMGWDAFGLPAE 86

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKG 117
           + A   G   + F  +N + F+     L  SY  D  I TT+  ++   + +++++  +G
Sbjct: 87  QYALKTGHNPRDFTAKNIKTFKRQIRSLGFSYDWDREINTTDPSYYKWTQWIFEELYKRG 146

Query: 118 DIYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             Y+      +           ++EV  G           PV  +    +  +++AY D+
Sbjct: 147 LAYEDNIEVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADR 202

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           L+   +             E I   +      S     F      PDD   +     D L
Sbjct: 203 LIDDLDDLD--------WPESIKEQQRNWIGRSRGASVFFEVKGHPDDKVEVFTTRPDTL 254

Query: 236 TNYLTT 241
                 
Sbjct: 255 FGATYM 260



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 61/411 (14%), Positives = 141/411 (34%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            + R +D  +     I      G+  +  Y+G  S  +  + +    DD +    D    
Sbjct: 344 HDDRDYDFAKKFGLPIVPVIEGGNTDEAAYTGDGSHFNSGFMDGMGKDDAIKAAIDWLTD 403

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           +   +         + F    Y  + +                     LP  +  +    
Sbjct: 404 HKAGHEKVNYRLRDWIFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPKAKDIQTSGG 463

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW 256
            +S L +L       D   +        M  W  +   ++      ++       K K+W
Sbjct: 464 KESPLANLDDWVNVVDKNGRKGKRETNTMPQWAGSSWYWMRYMDPHNDQAIASPEKLKYW 523

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +         +    P  K V     +    EK+SKS 
Sbjct: 524 SPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGTNHEKMSKSK 583

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI+P ++++E G D LR + +          +  +G+         +G  + + R   
Sbjct: 584 GNVINPDDIVDEYGADTLRVYEMFMGPIDAAKPWSTEGI---------HGAYHWLDRVWR 634

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ D + +       T +D  +  + ++ ++ + ++ ++   +  ++Q++  V++  + 
Sbjct: 635 LLIDDNNHLRDR--VTTINDGKLDKIYNQTVKIVSDDFEHMRFNVGISQMMVFVNDAYK- 691

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + ++ +     LL    P +A +++ +L 
Sbjct: 692 -------------------ADSLPIDYMEGFVKLLSPVAPHIAEELWSLLG 723


>gi|321472021|gb|EFX82992.1| hypothetical protein DAPPUDRAFT_316089 [Daphnia pulex]
          Length = 1275

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/470 (13%), Positives = 139/470 (29%), Gaps = 36/470 (7%)

Query: 26  YEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD 85
              + A +++R       D       D+ G+ I      AG   K       +  +D   
Sbjct: 334 RVCLAAGIISR-------DQEMICPVDDGGRFIDPVTDFAGQHVKDADKNIIKMLKDCGR 386

Query: 86  VLDISYDDFIRTTEKRHHDTCRI-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +++         T K  +  C       +++ +       +           + Y+  D 
Sbjct: 387 LVNSG-------TVKHSYPFCWRSETPLIYRAVPSWFIRVEQMSKQLLENNQKTYWVPDF 439

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V +   G +     +                  +             L      E+    
Sbjct: 440 VKEKRFGNWLRDARDWAVSRNRYWGTPIPIWMSEDGEEVVCVGSIAELKELTGIELTDLH 499

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +  +  +++  K    G         +   W ++ +       Y           +PAD 
Sbjct: 500 RENVDGITIPSKIP--GRPPLKRVSEVFDCWFESGSMPYAQVHYPFENRKEFEDCFPADF 557

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G D     F+ +   +  L    P    + +   +   G+K+SK   N  DP+ V+ 
Sbjct: 558 IAEGIDQTRGWFYTLLVLSTALFNKPPFKNLIVNGLVLASDGQKMSKKKKNYPDPMLVVN 617

Query: 319 EVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
           + G DALR +L+       ++  + ++G++  +             R     L+  +   
Sbjct: 618 KFGADALRLYLINSPVVRAENLRFKEEGVRDIIKDVFLPWYN--AYRFFVQNLERLERED 675

Query: 378 PTPGAFTES---------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRY 427
                + E          D  I+S    +L  + + M    ++  + +++  V    + Y
Sbjct: 676 GIKFVYEEEGSNLSTNVMDRWIISYTQSLLLFVHQEMAAYRLYTVVPRLVRFVDYLTNWY 735

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +         D     L     V+  +  ++  F P L   ++  L
Sbjct: 736 VRMNRKRLKGDGGKDDCHHALQTLFSVLFSMIRVMAPFTPFLTELMYRNL 785



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + +        +    PH GH     I D++ R+   +G  V    G D HG  +   
Sbjct: 36  KGKPRYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQNGFHVERRFGWDTHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                              N     +  V + + ++  + + +   I +++  +T     
Sbjct: 96  IDKTLGIKGPEDVMKMGIANYNAECRKIVMRYAGDWETIVNRMGRWIDFENDYKTLYPWF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K++ +KG +Y+G     +S       ++ E
Sbjct: 156 MESIWWVFKQLFEKGLVYRGFKVMPFSTACSTPLSNFE 193


>gi|254553372|ref|NP_742012.2| isoleucyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|44890803|gb|AAH67029.1| Isoleucine-tRNA synthetase [Mus musculus]
 gi|74228804|dbj|BAE21890.1| unnamed protein product [Mus musculus]
 gi|148709142|gb|EDL41088.1| isoleucine-tRNA synthetase [Mus musculus]
          Length = 1262

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 68/467 (14%), Positives = 145/467 (31%), Gaps = 40/467 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               D  G    +     G   K       R  ++   +L       SY    R+     
Sbjct: 349 VCPVDASGCFTEEVTHFVGQYVKDADKNIIRMLKEQGRLLAAGTFTHSYPFCWRSDTPLI 408

Query: 103 HDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + +    + ++    D        CY     +R++ + N  +  +            P+ 
Sbjct: 409 YKSVPSWFVRVEPMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIP 468

Query: 159 WM---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E      S  + + LS  +        I+         K+ L+ +S       
Sbjct: 469 LWVSEDLEEVVCIGSVAELEELSGTKISDLHRESIDHLTIPSRCGKAPLRRVSE------ 522

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      +   W ++ +       Y           +PAD    G D     F+ +
Sbjct: 523 -----------VFDCWFESGSMPYAQVHYPFESKREFEDAFPADFIAEGIDQTRGWFYTL 571

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A  L    P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+   
Sbjct: 572 LVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSIIDKYGADALRLYLINSP 631

Query: 334 ACG-KDGFYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--- 386
               ++  + ++G++  +   L    N     +     +  ++    +       ES   
Sbjct: 632 VVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLHKEEEVKFLYNEHTVRESPNI 691

Query: 387 -DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRA 444
            D  +LS    +L      M    ++  + +++  V    + Y    +     ++  +  
Sbjct: 692 TDRWVLSFMQSLLGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGESGVEDC 751

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              L     V+  L  L+  + P L   ++  L +  +    +  D 
Sbjct: 752 VMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKLLIDPASLRDKDT 798



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R K        +    PH GH     I D++ R+    G  V    G D HG  +     
Sbjct: 38  RPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEID 97

Query: 60  -------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                                  +  V + S  ++     L   I +D+  +T   +  +
Sbjct: 98  KTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSAEWKSTVTRLGRWIDFDNDYKTLYPQFME 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +   ++K++ DKG +Y+G     +S       ++ E  +   
Sbjct: 158 SVWWVFKQLYDKGLVYRGVKVMPFSTACGTPLSNFESNQNYK 199


>gi|32171525|sp|Q898V2|SYL_CLOTE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 812

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+    H GH +    +D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYVLEMFSYPSGSNLHAGHWFNYGPSDSWARFKRMQGFNVFQPMGFDSFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K    +N          +     +D+ + T+E  ++   + ++ ++      Y+
Sbjct: 91  KTGVHPKDSTMKNIETMTKQLKSMGAMFHWDNEVITSEPEYYKWTQWMFLQLYKNNLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  GA         + V   +   +FF+++ Y ++LL   +
Sbjct: 151 KNAPVNWCPSCNTVLANEQVLDGA----CERCSSDVIKKDLTQWFFKITDYAEELLEKLD 206

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 207 DLDWPENTKSMQKHWI 222



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 88/232 (37%), Gaps = 27/232 (11%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D +V G +    H +Y   F         L+ + P          +   G K+SKS G
Sbjct: 519 PVDKYVGGPEHACMHLLYARFFTKALRDMGYLNFDEPFSSLTHQGLILGPDGLKMSKSKG 578

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N I P + I+E G D  R +L+      + G +  +G+K        +   + V R+++ 
Sbjct: 579 NTISPDDYIDEFGSDVFRMYLMFGFDYTEGGAWSDEGIKS------VSRFVDRVERTLAS 632

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                +           +++ +  V    ++ I E+ +    +  +A+++   + + +Y 
Sbjct: 633 CRYYINNPSDDKITIDNNEKDLNFVRHNSIKSITEDAEKMQFNTCIARLMEYTNALSKYI 692

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +          N +          E +    IL+  F P  + + +++L + 
Sbjct: 693 NE--------DNKNSK-----FLKECVEDFIILIAPFAPHFSEEQWELLGMT 731


>gi|47117020|sp|Q8BU30|SYIC_MOUSE RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Isoleucine--tRNA ligase; Short=IRS; Short=IleRS
 gi|26352902|dbj|BAC40081.1| unnamed protein product [Mus musculus]
          Length = 1262

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 68/467 (14%), Positives = 145/467 (31%), Gaps = 40/467 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               D  G    +     G   K       R  ++   +L       SY    R+     
Sbjct: 349 VCPVDASGCFTEEVTHFVGQYVKDADKNIIRMLKEQGRLLAAGTFTHSYPFCWRSDTPLI 408

Query: 103 HDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           + +    + ++    D        CY     +R++ + N  +  +            P+ 
Sbjct: 409 YKSVPSWFVRVEPMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIP 468

Query: 159 WM---EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                + E      S  + + LS  +        I+         K+ L+ +S       
Sbjct: 469 LWVSEDLEEVVCIGSVAELEELSGTKISDLHRESIDHLTIPSRCGKAPLRRVSE------ 522

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      +   W ++ +       Y           +PAD    G D     F+ +
Sbjct: 523 -----------VFDCWFESGSMPYAQVHYPFESKREFEDAFPADFIAEGIDQTRGWFYTL 571

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A  L    P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+   
Sbjct: 572 LVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSIIDKYGADALRLYLINSP 631

Query: 334 ACG-KDGFYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--- 386
               ++  + ++G++  +   L    N     +     +  ++    +       ES   
Sbjct: 632 VVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLHKEEEVKFLYNEHTVRESPNI 691

Query: 387 -DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRA 444
            D  +LS    +L      M    ++  + +++  V    + Y    +     ++  +  
Sbjct: 692 TDRWVLSFMQSLLGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGESGVEDC 751

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              L     V+  L  L+  + P L   ++  L +  +    +  D 
Sbjct: 752 VMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKLLIDPASLRDKDT 798



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           R K        +    PH GH     I D++ R+    G  V    G D HG  +     
Sbjct: 38  RPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEID 97

Query: 60  -------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHD 104
                                  +  V + S  ++     L   I +D+  +T   +  +
Sbjct: 98  KTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSAEWKSTVTRLGRWIDFDNDYKTLYPQFME 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           +   ++K++ DKG +Y+G     +S       ++ E  +   
Sbjct: 158 SVWWVFKQLYDKGLVYRGVKVMPFSTACGTPLSNFESNQNYK 199


>gi|312600998|gb|ADQ90253.1| Isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 886

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 19/261 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++       + P        P D++  G D     F++    + 
Sbjct: 512 WTKENDILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSV 563

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P  K +     +  KG K+SKS GN +DP+ ++ + G D  R ++        D
Sbjct: 564 IYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANSEY-YND 622

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y +   ++  N ++   I N    +V  ++ +     P     TE D  I +   ++ 
Sbjct: 623 IVYSEAIFEQ--NVEIYRKIRN----TVRFLITNLADFKPKKYELTEVDLYIFNKIQKLK 676

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
            EI +N       R +  + + + E  + Y    K      K    +   V Y   E+++
Sbjct: 677 NEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQ 736

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L I +   +P  A +I+  +
Sbjct: 737 VLNIAIAPIMPTTAEEIYSFI 757



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 48  RGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENK 107

Query: 62  AQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             N   +            F +            L++   +    +T    +      L+
Sbjct: 108 IINQIGSKSTLEIRRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLF 167

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           KK+  +G +Y+     ++S   ++   + E+  
Sbjct: 168 KKMVSRGLVYRALKPVYWSPSSQSALAEAEIEY 200


>gi|167835732|ref|ZP_02462615.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 945

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D +      G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYVKDALPAGQWLEIDRYAVAFAAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASNARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + +  +T   ++       
Sbjct: 114 IEKQFGKSLPAAEVMEKARAYATEQIEKQKTGFKRLGVLGDWSNPYKTMNFQNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|256751076|ref|ZP_05491958.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749982|gb|EEU63004.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 816

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/295 (20%), Positives = 110/295 (37%), Gaps = 35/295 (11%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G ++ DG+K            N V R +   ++  +    T
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKA------IARFVNRVERFIEKFIEIRNNSSKT 646

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                E ++ +  +    ++ + E+      + A+A+++ LV+ + +Y            
Sbjct: 647 KDEMGEEEKELNYIRHYTIKSVTEDADKFQFNTAIARIMELVNALYKY-----------E 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                  + +   EV+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 696 ADVEVKNIKFY-EEVVADLIRLLAPFAPHFSEEMWEKLGYEYSVFNQKWPKWDEK 749



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGWEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYEVITCLPDYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQRNWIGKSD 225


>gi|225349686|gb|ACN87768.1| MetRS [Lactobacillus casei]
 gi|225349688|gb|ACN87769.1| MetRS [Lactobacillus casei]
          Length = 211

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|113460332|ref|YP_718393.1| isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945180|sp|Q0I1V8|SYI_HAES1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112822375|gb|ABI24464.1| Isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 937

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 112/350 (32%), Gaps = 41/350 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTF 214
           V+W+   G         ++          + +P+     NE        L+ L    K  
Sbjct: 441 VRWIPSWGEARIDKMVANRPDWCISRQRTWGVPMTMFVHNETEELHPRTLELLEDIAKRV 500

Query: 215 DW-GIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + Y +        +G       
Sbjct: 501 EKAGIQAWWDLDPAELLGEEAKTYHKVPDTLDVWFDSGSTYASVVEQRPEFNGKS----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            D+++ G D     F +    +   +   P  + +     +  KG K+SKSLGNVI P E
Sbjct: 556 TDMYLEGSDQHRGWFMSSLMLSTATNNKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSE 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V  + G D LR ++           Y  +        + A      +  +   +L + +G
Sbjct: 616 VWNKNGADILRLWVAS-------TDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +S       EI+E   N   H  + +++   S      Y 
Sbjct: 669 FDPKNDLVNPEEMISLDRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 729 DIIKDRQYTTKADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYL 778



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGTLHLGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGVLGDWDNPYLTMNFETEAEI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            +   V   E E  
Sbjct: 166 IRTLGKVIQNGHLYKGSKPVHWCLDCASSLAEAEVEYEDKVSPSIYVRFAAVSAAEVEEK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  L   Q  L +   +   + LP  R   V + ++  L  L   R
Sbjct: 226 FNALGKGQGALSAVIWTTTPWTLPSNRAIAVNAELEYQLVQLGNER 271


>gi|331085320|ref|ZP_08334406.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408103|gb|EGG87593.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 807

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK Y      YP+    H+GH    +I+DV +R+  L    ++   G D  G      
Sbjct: 32  KREKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLLQKYYIVHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +   +N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 92  AIKMGVHPSISTAENVKNIKRQINEIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y ++LL+ 
Sbjct: 152 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLRITKYAERLLAD 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 208 LDKLDWPEKVKKMQADWI 225



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 100/249 (40%), Gaps = 42/249 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            +  P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 526 DEMLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFKKLFNQGMITGKNGIKMS 585

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G+         +G+   +++
Sbjct: 586 KSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGI---------DGVYRFLNK 636

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
             ++++   D  +          + ++ + ++++ +I   +++  ++  ++  +   +++
Sbjct: 637 VWNLVMDSKDKNVSAT-------KEMIKIRNKMVYDITTRLESFSLNTVISGFMEYNNKL 689

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
           +                + A     V  E +  LA+LL  F P +A +++  L       
Sbjct: 690 N----------------EIAKKAGGVDKETLSTLAVLLAPFAPHMAEELWQQLGHEGTVF 733

Query: 483 NRCFQSLDQ 491
           N  + + D+
Sbjct: 734 NAGWPTYDE 742


>gi|327184092|gb|AEA32539.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 804

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 L-DGLDWPEPVKEMQRNWIGRSVG 226



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 77/464 (16%), Positives = 147/464 (31%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  DI+ + F     +            +
Sbjct: 329 YGTGAVMAVPAHDDRDYAFATKFGLPINPVLEGGDITKEAF----TEDGPHINSEFLNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + +    K           E   N          Q Y  +  PV   E+           
Sbjct: 385 NIEDAKKKMVDWLEDHNCGEKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                         LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      ++    D    K W P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   IP      ++D  +  V +  +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+      + A++Q++  ++                    +A T+     E       
Sbjct: 664 VTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ I    DE+  +        P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQIFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|325957385|ref|YP_004292797.1| leucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333950|gb|ADZ07858.1| leucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 804

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 L-DGLDWPEPVKEMQRNWIGRSVG 226



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/464 (16%), Positives = 147/464 (31%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  DI+ + F     +            +
Sbjct: 329 YGTGAVMAVPAHDDRDYAFATKFGLPINPVLEGGDITKEAF----TEDGPHINSEFLNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + +    K           E   N          Q Y  +  PV   E+           
Sbjct: 385 NIEDAKKKMVDWLEDHNCGEKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                         LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      ++    D    K W P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   IP      ++D  +  V +  +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+      + A++Q++  ++                    +A T+     E       
Sbjct: 664 VTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|315283055|ref|ZP_07871330.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613297|gb|EFR87166.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 921

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 23/267 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELTR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  A       E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFQPTVNAVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSRDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             E +  L  LL   +P    ++++ L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNNL 769



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  GRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVEGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|322435106|ref|YP_004217318.1| isoleucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162833|gb|ADW68538.1| isoleucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 1000

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 25/268 (9%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW ++  +      +    D  ++  +PADL+  G D     FH+    + 
Sbjct: 576 FRKEMDILDVWFESGAS------WHAVLDAEESLRFPADLYTEGGDQHRGWFHSSLLTSV 629

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            L    P      S   +  +G   SKSLGN +DP++V + +G + +R ++         
Sbjct: 630 ALRGVAPYRMVATSGWTLDEQGRAFSKSLGNGVDPVDVAKRLGAEIIRLWVAS------- 682

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
             + +D                 +  ++  +L +     P   A       + D+ IL+ 
Sbjct: 683 VDFREDVAASENLMQRVGDNYRKLRNTLKFLLGNLHDFDPAKDALPFADLEQLDQYILAQ 742

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLY 449
            + ++ +IR+       HRA   +   V       Y D  K   +     +P+R  +   
Sbjct: 743 TAELVAKIRKAYDEFEFHRAYHALNEFVNTDLSALYLDVLKDRLYTFAPDHPER-RSAQT 801

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +   L  L+   +   A++ +  L
Sbjct: 802 ALWRIAEALVRLIAPILSFTADEAWAFL 829



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 15/156 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  +     Y N   H+GHA    I D + +   + G D  +  G D HG  I      
Sbjct: 55  PKFILHDGPPYANGAIHLGHALNKCIKDFVVKTKTMAGFDAPYVPGWDCHGLPIEIKVDE 114

Query: 65  A-------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                             + + ++     +   + + +   ++D  +T    +       
Sbjct: 115 QLGRKKLEMPALSVRRACREYAEKYVTLQKSQFERIGVFGRWNDPYKTMSFGYEAAIVET 174

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           + +  ++G +YKG    ++ + D+    + EV    
Sbjct: 175 FYEFFEQGFVYKGLKPVFWCIHDQTALAEAEVEYEM 210


>gi|320584159|gb|EFW98370.1| isoleucine-tRNA synthetase [Pichia angusta DL-1]
          Length = 1075

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 108/273 (39%), Gaps = 10/273 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGS-KAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           + +   W ++ +    +  Y  + D       +PA+    G D     F+ +      L 
Sbjct: 524 EDVFDCWFESGSMPYASKHYPFDEDKERFTGAFPANFISEGLDQTRGWFYTLTVLGTHLF 583

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF- 340
              P    + S   +   G+K+SK L N  DP+ V+   G DALR +L+       +   
Sbjct: 584 GKAPYQNVIVSGIVLAADGKKMSKRLKNYPDPMNVLNTYGADALRLYLINSPVLRAETLK 643

Query: 341 YDKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCS 395
           + ++G+K+ V+  L         +   V+++ K+        P   +    D  +L+   
Sbjct: 644 FKEEGVKEVVSKVLLPWWNSYKFLEGQVALLKKNEGIDFKYDPESRSENVMDRWLLASIQ 703

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            +++ IR  M+   ++  + ++++L+ E+ + Y    +     +   +     +    E 
Sbjct: 704 SLIKFIRVEMEEYRLYTVVPKLLNLIDELTNWYIRFNRKRLKGENGVEDCLKAMNTLTEA 763

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           +  L   +  F P LA  I+  + V  E +  +
Sbjct: 764 LFTLVRAMAPFTPYLAENIYGRMKVLFEEQTLK 796



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + +        +    PH GH     I D++ R+  ++G  V    G D HG  +   
Sbjct: 36  KGKPQFAFYDGPPFATGTPHYGHILASTIKDIVPRYATMNGFYVERRFGWDTHGLPVEHE 95

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V   +  +R     L   I +D+  +T     
Sbjct: 96  IDKKLGIKCKQDVLDMGIAKYNEECRSIVMTYAEEWRKTIGRLGRWIDFDNDYKTLYPEF 155

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++    +K++ +KG +Y+
Sbjct: 156 MESEWWAFKQLFEKGAVYR 174


>gi|148878500|sp|Q4AAS1|SYI_MYCHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144227432|gb|AAZ44122.2| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 886

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 19/261 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++       + P        P D++  G D     F++    + 
Sbjct: 512 WTKENDILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSV 563

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P  K +     +  KG K+SKS GN +DP+ ++ + G D  R ++        D
Sbjct: 564 IYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLLILSKYGCDIFRLWVANSEY-YND 622

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y +   ++  N ++   I N    +V  ++ +     PT    TE D  I +   ++ 
Sbjct: 623 IVYSEAIFEQ--NVEIYRKIRN----TVRFLITNLADFKPTKYELTEVDLYIFNKIQKLK 676

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
            EI +N       R +  + + + E  + Y    K      K    +   V Y   E+++
Sbjct: 677 NEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQ 736

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L I +   +P  A +I+  +
Sbjct: 737 VLNIAIAPIMPTTAEEIYSFI 757



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 48  RGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENK 107

Query: 62  AQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             N   +            F +            L++   +    +T    +      L+
Sbjct: 108 IINQIGSKSTLEIRRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLF 167

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           KK+  +G +Y+     ++S   ++   + E+  
Sbjct: 168 KKMVSRGLVYRALKPVYWSPSSQSALAEAEIEY 200


>gi|187251551|ref|YP_001876033.1| isoleucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971711|gb|ACC98696.1| Isoleucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 942

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 73/443 (16%), Positives = 144/443 (32%), Gaps = 34/443 (7%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--------SYDDFIRTTEKRH 102
            DE G    +A + AG         N+   + + ++ ++        SY    R  +   
Sbjct: 360 VDEKGIFTKEAGEFAGQH---IFKANAEIIKRLNELGNLIKEETIDHSYPHCWRCKQPII 416

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                  +  +S  G   +   +      D                  +      ++   
Sbjct: 417 FRATEQWF--LSIDGQNLRSELTKAVESVDFYPKAGVSRIGNMVKMRPDWCLTRQRFWGT 474

Query: 163 EGYFFRLSAYQDKLLS-YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               F     +   +     +H + +      +   +F    +  L    K    G    
Sbjct: 475 PATIFYCDDCKTPQVDAKLFAHIKQMALDNGGDFWFTFPNEKI--LPEGYKCTKCGGTHF 532

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
              + I+ VW+D+  ++             +   +PAD+++ G D     F +   P+  
Sbjct: 533 VKEKDILDVWLDSGCSWRAVLK-------DRGLKYPADMYLEGADQHRGWFQSSLIPSVA 585

Query: 280 LSANLPLPKKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L    P  +++ +HGF+L + G  + KSLGN ++P EV ++ G D LR ++        D
Sbjct: 586 LEGKSPF-RQILTHGFVLDQHGHAMHKSLGNSVEPHEVFDKYGADILRLWVSLSDYQ-DD 643

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + L      D    + N    ++  +   D +     P   TE D  +LS    +
Sbjct: 644 IRISDEIL--SGPVDSYRRLRNTFRYAMGSLFDYDPEIHKMKPEEMTEIDRYMLSKLDTL 701

Query: 398 LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVEV 454
           ++E  EN       + +  +I            DA K       T+     +      E+
Sbjct: 702 IKESLENYDIYEFRKVVRGLIDFCILDLSSFMLDASKDRLYTLGTDAQTRRSAQNALYEI 761

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
           +  L  LL   +     + +  L
Sbjct: 762 LIVLLKLLAPVLSFTTEEAWQEL 784



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +E   +     Y N + HIGHA +  + D++ +   + G    +  G D HG  I +A 
Sbjct: 55  GKEVFMLHDGPPYANGRIHIGHAMDKTLKDMVLKSRHMQGFQTPYIPGWDCHGLPIEQAL 114

Query: 63  QNAGVTTK----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
                  K                 F D+         + L +  D  ++  T  KR+  
Sbjct: 115 MKEMKIDKKSIKEEDVPGFRKKAREFADKFVDIQMQGFERLGVQGDWANYYSTMAKRYEG 174

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++    +KG  Y+G  + ++    E    D E   
Sbjct: 175 NVIGVFLDFIEKGLAYRGTKTIFWCPTCETALADAETEY 213


>gi|154276488|ref|XP_001539089.1| hypothetical protein HCAG_06694 [Ajellomyces capsulatus NAm1]
 gi|150414162|gb|EDN09527.1| hypothetical protein HCAG_06694 [Ajellomyces capsulatus NAm1]
          Length = 1034

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 110/294 (37%), Gaps = 12/294 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + ++  W ++ +    +  Y         K +P D    G D     F+ +   +  L  
Sbjct: 474 EEVLDCWFESGSMPYASQHYPFENKEHFEKSFPGDFIAEGLDQTRGWFYTLAVISTHLYG 533

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   +
Sbjct: 534 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRF 593

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V   L     +        ++   ++D + +       T     D  IL+ C
Sbjct: 594 KESGVKEIVAKVLLPLWNSYKFFEAQVALLKKIEDVEYVFDPAAEATNTNVMDRWILASC 653

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 654 QSLLKFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 713

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           V+  L   L  F P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 714 VLYTLVRGLAPFTPFITDNIYLRL-LPHIPKSLQAEDSRSVHFLAFPEVREELF 766



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 21/58 (36%)

Query: 2  KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
          + R          +    PH GH     I D++ R+  + G  V    G D HG  I 
Sbjct: 30 RGRTPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIE 87


>gi|326407355|gb|ADZ64426.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 932

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 109/279 (39%), Gaps = 29/279 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSS------WNGVLNERDYLSFPADLYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KG K+SKS+GN I P +V ++ G D LR ++        D
Sbjct: 570 AVNGVAPYKAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLWVASIDTE-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +       + +   +  ++  ++ +     P   A         D+ +L  
Sbjct: 629 VRVSMDILSQ------VSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDR--ASTV 447
            + ++++IR    N         +I+ +       Y D  K     +   +P+R    TV
Sbjct: 683 FNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTV 742

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +YV   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 743 MYV---ILKDLVKILVPILPHTAEETWTYLEHEPENFAY 778



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG+  K             +  +     R     L +   +D    T    +     
Sbjct: 105 LAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEY 200


>gi|226290958|gb|EEH46386.1| valyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 1050

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 99/303 (32%), Gaps = 47/303 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
             +  DP  ++  W  +     +T G+  N      K +P  +   G DIL F    +  
Sbjct: 562 FTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFEKLYPTSVLETGWDILFFWVARMIM 619

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------ 317
               ++  +P  +          +G K+SKSLGNVI+PI+VI                  
Sbjct: 620 LGIKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVINPIDVIEGIKLQDLHEKLKHGNLA 679

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ LV     G D  +D   +         N I
Sbjct: 680 EKEITIATKYQKKAFPKGIPECGTDALRFALVTYTTGGGDINFDIQVI--HGYRRFCNKI 737

Query: 359 GNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  +  +  D+         G  + S+  IL   ++  +   E+++N+    A + 
Sbjct: 738 YQATRYVLGKLGDDFKPQASPTKTGKESLSERWILHKFNKAAKIANESLENRDFSVAAST 797

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D + +  K         +   +        +     L+   +P +  +++
Sbjct: 798 LYQYWYSQLCDVFIENSKSLLQPDVPAEVQQSAKETLYTALEGALTLIHPTMPFITEELW 857

Query: 475 DIL 477
             L
Sbjct: 858 QRL 860



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE+ K  I           H+GH     + D + R+ R+ G  VL+  G D  G     
Sbjct: 122 VKEKGKFVIPIPPPNVTGDLHMGHGLTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 181

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 182 VVEKILWKTEGKSRHDVGREVMTNMIWDWTHKYHDSITTTLKRLGGSFDWTREAFTMDEN 241

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 242 LSAAVTETFVRLHEEGIIYRENRLVNWC 269


>gi|213019556|ref|ZP_03335362.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994978|gb|EEB55620.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 1054

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 71/469 (15%), Positives = 143/469 (30%), Gaps = 23/469 (4%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----Y 91
           F+     D+      D  G+   + +  AGV      D   +  +              Y
Sbjct: 343 FYLCQSHDIRAVCPVDNAGKFTTEVSDLAGVHVFDANDTVIKKLKRQGSWFKTEQYIHNY 402

Query: 92  DDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +    K      ++ K        +RD  +    E       
Sbjct: 403 PHCWRTDTPLIYRTMPSWYVAVTKFKGRMTELNKRVNWMPNHIRDGQFGKWLEGAHDWSI 462

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +   +                    L  +   ++    +  +  L
Sbjct: 463 SRNRFWGTPIPVWKSDDAKYPRVD---------VYGSIAELERDFNVKIDDLHRPFIDTL 513

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGK 265
           +        G  +      +   W ++ +       Y         K +PAD     I +
Sbjct: 514 TRPNPDDPTGKSVMRRVPDVFDCWFESGSMPFAQVHYPFENKEWFEKNFPADFITEYIAQ 573

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+ ++  +  L  + P    +     +  KG+K+SK L N  DP+EV ++ G DAL
Sbjct: 574 TRGWFYTLFVLSTALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDKYGSDAL 633

Query: 326 RYFLVREIACGK-DGFYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           R+ ++        +   DK+G L + V  ++   I N           D           
Sbjct: 634 RFLMLSGSIVCGGNLLLDKEGNLVRDVLKNVIKPIWNSYHFFTMYANADGIKAEICQDYQ 693

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +  D  ++S C   ++ I+ +M N     A   +      ++ ++  +      K++ D+
Sbjct: 694 STIDRYMISKCFEAVEGIQASMNNYNSQEACKILTDFFEVLNNWYIRRSRERFWKSDLDQ 753

Query: 444 AST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             T    V   V   +       +P +   I+  L   + +       Q
Sbjct: 754 DKTDAYNVLYTVFYYMLRAAAPLLPLITETIWQGLQYKETSVHLADFPQ 802



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 23/149 (15%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     I D  AR+  +    V    G D HG      A+         
Sbjct: 49  PPFANGLPHYGHLLTGFIKDAFARYQTMLQKRVERRFGWDCHGLPAEMGAEKELRISGRT 108

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   F  +  +     A  +D   D   +T +K   ++    +K
Sbjct: 109 EIEKFGIEKFNNHCRTSVMKFSSEWEKYVNRQARWVDFHNDY--KTMDKSFMESVMWAFK 166

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           ++ DKG +Y+      YS   E   ++ E
Sbjct: 167 QLYDKGLVYESIRVVPYSWACETPLSNFE 195


>gi|256827073|ref|YP_003151032.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583216|gb|ACU94350.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 948

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 84/494 (17%), Positives = 154/494 (31%), Gaps = 41/494 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD---MADVLDI--SY 91
           +       V      D+ G  +       G++T     +     R+   +   ++I  SY
Sbjct: 350 YLVGQQFGVEMIMPVDDDGHLMDYVPHFGGLSTDEANPKIIEWLREKGMLVASVEITHSY 409

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDI--------YKGCYSGWYSLRDEAYYNDDEVYK 143
               R             +  + D G           K  +   +         +D    
Sbjct: 410 PHCWRCHNPVIFRATDQWFVSMDDTGLRAKALDAIRTKVNWVPTWGANRIGSMVEDRPDW 469

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
               Q       PV      G      A  D +++ + +                F K  
Sbjct: 470 CISRQRNWGVPIPVFKCASCGETVATEATFDAVINLFATEGADAW----------FTKDP 519

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
            + L         G         I+ VW ++  +     G L +   +    WPAD+++ 
Sbjct: 520 AEYLPEGTCCPQCGSTELKPEHDILDVWWESGVS---NVGVLKHRAAADGLRWPADVYLE 576

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           G D     F +            P    +     +   GEK+SKS GN IDP +V  + G
Sbjct: 577 GSDQHRGWFQSSLLCGIGAFGQAPYKNVICCGFTVDENGEKMSKSKGNGIDPAQVANKYG 636

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D LR ++        D    +  L +   +D      N   R +   L D+D       
Sbjct: 637 ADVLRLWVASTDYSV-DVSVGESILAR--TSDAYRRFRNTF-RFLLGSLADFDPETDAVA 692

Query: 382 AFT---ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL 436
           +F     +D+  L   +R+L ++         HR    +   V       Y DA K    
Sbjct: 693 SFDSLLPADQWALVRLARLLDDVNAGYDLYQYHRVFRALYDYVVGDLSAVYLDALKDRLY 752

Query: 437 KK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            +  T+P R  +   V + ++  +  ++   +     +++     A   +  + +  +L 
Sbjct: 753 AEAPTSPAR-RSAQTVLMAILDTMVRIMSPILSFTCEEVWQHYPSALREQADRPISVQL- 810

Query: 495 PGFMLHKTFDPIFP 508
            G+   +TF P  P
Sbjct: 811 AGWPSAETFTPALP 824



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I    
Sbjct: 48  DGEPFVLHDGPPYANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYIPGWDCHGQPIEHEV 107

Query: 63  QNAGVT------TKVFVDQNSRNFRDMAD----------VLDISYDDFIRTTEKRHHDTC 106
           +    T       +  + +  R + D              ++  +D    T +  +    
Sbjct: 108 EKKIGTEKMNSLPQDVIRRMCREWADRFVNVQREGFKRLGVNADWDHPYLTFQPDYESAN 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++K++   G +Y+G     +         + E+  
Sbjct: 168 VEVFKRMYLDGAVYRGRKPIHWCSHCHTALAEAEIEY 204


>gi|71893387|ref|YP_278833.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 887

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 19/261 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+  ++       + P        P D++  G D     F++    + 
Sbjct: 513 WTKENDILDVWFDSGVSFFAANISDEKP--------PFDIYFEGSDQYRGWFNSSLINSV 564

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           +     P  K +     +  KG K+SKS GN +DP+ ++ + G D  R ++        D
Sbjct: 565 IYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLLILSKYGCDIFRLWVANSEY-YND 623

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             Y +   ++  N ++   I N    +V  ++ +     PT    TE D  I +   ++ 
Sbjct: 624 IVYSEAIFEQ--NVEIYRKIRN----TVRFLITNLADFKPTKYELTEVDLYIFNKIQKLK 677

Query: 399 QEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIR 456
            EI +N       R +  + + + E  + Y    K      K    +   V Y   E+++
Sbjct: 678 NEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQ 737

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L I +   +P  A +I+  +
Sbjct: 738 VLNIAIAPIMPTTAEEIYSFI 758



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 49  RGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENK 108

Query: 62  AQNAGVTT---------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             N   +            F +            L++   +    +T    +      L+
Sbjct: 109 IINQIGSKSTLEIRRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLF 168

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           KK+  +G +Y+     ++S   ++   + E+  
Sbjct: 169 KKMVSRGLVYRALKPVYWSPSSQSALAEAEIEY 201


>gi|327286779|ref|XP_003228107.1| PREDICTED: valyl-tRNA synthetase-like [Anolis carolinensis]
          Length = 1149

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 126/419 (30%), Gaps = 97/419 (23%)

Query: 150  YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             +   + V+ + +  ++ R                  I+P        +++   ++D  +
Sbjct: 653  CSRSKDVVEPLLKPQWYVRCDTMARGAAEAVRRGDLRIVPDFHLKTWFNWMD-NIRDWCI 711

Query: 210  SRKTFDWGIKIP------DDP--------------------------------------- 224
            SR+   WG +IP      +DP                                       
Sbjct: 712  SRQ-LWWGHRIPAYFVTVNDPSVPPGEDMDGKYWVSGRSEQEAKEKAAKVFKVTADKISL 770

Query: 225  ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
               + ++  W  +     +  G+ +  +     F+P  L   G DIL F    +      
Sbjct: 771  RQDEDVLDTWFSSGLFPFSIFGWPNPNE-DLHVFYPGTLLETGHDILFFWVARMVMLGLK 829

Query: 280  LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI---------------------- 317
            L+  LP  +           G K+SKSLGNVIDP++VI                      
Sbjct: 830  LTGKLPFREVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGITLEGLHAQLLDSNLDPAEI 889

Query: 318  ---------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                            E G DALR+ L    + G+D   D + +         N + N  
Sbjct: 890  ERAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILG--YRHFCNKLWNAT 947

Query: 363  SRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              ++  + + +         G+ +  D  ILS  S  ++      Q          + + 
Sbjct: 948  KFAIRGLGEGFQPQTRPEPSGSESLIDRWILSRLSHAVELCDTGFQAYDFPGITTAIYNF 1007

Query: 421  V--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  D Y +  KP      +     T        +     LL  F+P +  ++F  L
Sbjct: 1008 WLYELCDVYLECLKP-VFAGQDEAAIRTSRNALYTCLDAGLRLLSPFMPFVTEELFQRL 1065



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 329 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMKGETTLWNPGCDHAGIATQVVVEKKL 388

Query: 67  VTTK---------------VFVDQNSR--NFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +               V+  +N +          L  S  +D    T + +      
Sbjct: 389 WKEQGKTRHDLGRELFIKEVWKWKNEKGDRIYHQLKKLGSSMDWDRACFTMDPKLSRAVE 448

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 449 EAFIRLHEEGVIYRSKRLVNWSCTLNSAISDIEV 482


>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938843|sp|Q45477|SYI_BACSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 921

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 80/461 (17%), Positives = 153/461 (33%), Gaps = 44/461 (9%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI------ 95
           GLDV      DE G   ++A    G+    + D N    + + +   +   +FI      
Sbjct: 341 GLDV--LCPVDEKGVMTSEAPGFEGMF---YDDANKAITQQLDEKGALVKLEFITHSYPH 395

Query: 96  --RTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             RT +          +   K                    ++  +N             
Sbjct: 396 DWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQ 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            A   P+     E     ++    + +S               N         L     +
Sbjct: 456 RAWGVPIPVFYAENGEPVITDETIEHVSELFRQHG-------SNIWFEKEAKDLLPEGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G       Q IM VW D+ +++                  PADL++ G D    
Sbjct: 509 HPGSPNGT--FTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR +
Sbjct: 561 WFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLW 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTES 386
           +   +    D       LK+   A++   I N   R +   L D+D            E 
Sbjct: 621 V-SSVDYQADVRVSDAILKQV--AEVYRKIRNTF-RFLHGNLFDFDPKTNAVAVEDLREV 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPD 442
           D+ +L   ++++ ++++             + +   +     Y D  K     +   +PD
Sbjct: 677 DQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPD 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           R  ++  V  E +  L  L    +P  A++++  L   +E 
Sbjct: 737 R-RSMQTVFYETLLALVKLSAPILPHTADELWSHLTFVEEQ 776



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +     R+    L +  D      T +  +    
Sbjct: 105 LTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|229918560|ref|YP_002887206.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469989|gb|ACQ71761.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 908

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 72/469 (15%), Positives = 152/469 (32%), Gaps = 43/469 (9%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +       +      D+ G    +A    G+  +     N +    + +   +    FI+
Sbjct: 332 YRVGQAYGLDVLCPVDDRGYMTDEAPGFEGLFYEDA---NKQIGMKLEENGYLLNLKFIK 388

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
            +           W+            +        E    + E             +N 
Sbjct: 389 HSYP-------HDWRTKKPVIFRATPQWFASIKDFREDMLREIEEVNWVPEWGMTRLYNM 441

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--- 213
           V+    +    R  A+   +  +Y      I+  E  + + +  +    ++   R+    
Sbjct: 442 VR-DRGDWVISRQRAWGVPIPIFYAEDGTEIITNETIDHIANLFREHGSNVWYEREAKDL 500

Query: 214 FDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
              G   P+ P         IM VW D+ +++       +N         PADL++ G D
Sbjct: 501 LPAGFTHPNSPNGEFRKELDIMDVWFDSGSSHAGVLEERENLRR------PADLYLEGSD 554

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++    A   +   P    +     +   G K+SKSLGN I P +++++ G + 
Sbjct: 555 QYRGWFNSSLSTAVATTGKAPYRNVLSHGFVLDGDGRKMSKSLGNTIAPNDLVKQYGAEI 614

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +R ++        D     D  K+   +++   + N +   +  +      M        
Sbjct: 615 VRLWVASVDYQ-SDVRASHDNFKQV--SEVYRKMRNTIRFLLGNLNGFEPSMRVAFDDMP 671

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR----YFDAQKP-WELK 437
           E+D  + +   ++  ++ +             V  LV    V+     Y D  K    ++
Sbjct: 672 EADRFMATKLKQLQTKVVKAYDEFDF----MAVYHLVHNFCVNELSSFYLDFTKDILYIE 727

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           + +  R   V  V  + +  L  LL   +P  A++ +  +    E   F
Sbjct: 728 REDDLRRRAVQTVMYDAVVLLTKLLAPILPHTADEAWKEVPGKSEASIF 776



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  +     Y N   H+GHA   ++ D++ RF  ++G       G D HG  I  A 
Sbjct: 46  GKPQYILHDGPPYANGDIHMGHAMNKVLKDIIVRFKGMNGYQSPMIPGWDTHGLPIENAL 105

Query: 63  QNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           Q AGV  K                +   + R+    L +   +++   T    +      
Sbjct: 106 QKAGVNRKEMTVAEFREKCAEYAMEQVNSQREQFKRLGLLADFENPYITLLPEYEAAQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           L+  +++KG IYKG    ++S   E+   + E+  
Sbjct: 166 LFGSMAEKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|15644113|ref|NP_229162.1| isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6226709|sp|P46213|SYI_THEMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4981921|gb|AAD36431.1|AE001790_3 isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 919

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 78/512 (15%), Positives = 157/512 (30%), Gaps = 65/512 (12%)

Query: 15  YPN-----AQPHI--GHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y +        HI  GH  E  I   V           +   +  DE G+   +A +  G
Sbjct: 309 YVSLETGTGCVHIAPGHGEEDYIYGHVQ--------YGLPIVSPVDEEGRFTEEAGKYKG 360

Query: 67  VTTKVFVDQNSRNFRDMADVLDI---------SYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +    F++  +    +      I         SY    R             +  +    
Sbjct: 361 M----FIEDANEVIIEDLKRKGILVHASSITHSYPHCWRCKGPVIFRATEQWFISVDHNN 416

Query: 118 DIYKG-------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
              K         +   +         ++        Q       P    +E G      
Sbjct: 417 LRQKVLEEIDKVKWIPEWGRNRIRSMVEERPDWCISRQRVWGTPIPAVKCKECGEVVLDP 476

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
              +  +   E         +   E+I                   G +  +     + V
Sbjct: 477 KVIEHFMKIVEKEGTNAWFEKEVEELI----------PEDFVCPKCGKRSFEKMLDTLDV 526

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           WID+  +      +       +   +P D+++ G D     FH+  + A     + P  +
Sbjct: 527 WIDSGAS------FEYITTKREDHPFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKE 580

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGNV+DP+EV+E+ G + LR +L        D       +++
Sbjct: 581 VLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYF-NDIKISMRIVEQ 639

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           +   ++   I N   R +   L+D+D              D   L     +++   E   
Sbjct: 640 Q--TEVYRKIRNTF-RFLLGNLEDFDPELDRVPHEKLLTIDRWALGRLQEIIKRATEYYD 696

Query: 407 NQLIHRALAQVISLV--SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           +    +    V+          Y D  K    ++  +     +   V  E++  L  +L 
Sbjct: 697 SYEFSKVYNLVVKYCTTELSSLYLDVVKDRLYVEAKDSIYRRSAQTVMHEILISLMKILA 756

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             +     +++  L   +++R ++++     P
Sbjct: 757 PIMTFTMEEVYSHLH--EKDRKYKTVQAEYWP 786



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIG A   I+ D++ ++  + G    +  G D HG  I   
Sbjct: 45  KGKPLFVLHDGPPYANGHIHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHR 104

Query: 62  AQNA------GVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                      ++        + F  +     R+    L +  D      T +  +    
Sbjct: 105 VSQELGEKIKEMSPAEIRKKCEEFALRFVDIQREEFKRLGVRGDWENPYITLKPDYEVKI 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++K + ++G++Y+     ++  R      + E+   
Sbjct: 165 LDVFKTLVEQGNVYRSLKPIYWCPRCRTALAEAEIEYH 202


>gi|170718689|ref|YP_001783409.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082325|sp|B0UV12|SYI_HAES2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|168826818|gb|ACA32189.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 937

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 112/350 (32%), Gaps = 41/350 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTF 214
           V+W+   G         ++          + +P+     NE        L+ L    K  
Sbjct: 441 VRWIPSWGEARIDKMVANRPDWCISRQRTWGVPMTMFVHNETEELHPRTLELLEDIAKRV 500

Query: 215 DW-GIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
           +  GI+   D                    + VW D+ + Y +        +G       
Sbjct: 501 EKAGIQAWWDLDPAELLGEDAKTYHKVPDTLDVWFDSGSTYASVVEQRPEFNGKS----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            D+++ G D     F +    +   +   P  + +     +  KG K+SKSLGNVI P E
Sbjct: 556 TDMYLEGSDQHRGWFMSSLMLSTATNNKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSE 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V  + G D LR ++           Y  +        + A      +  +   +L + +G
Sbjct: 616 VWNKNGADILRLWVAS-------TDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +S       EI+E   N   H  + +++   S      Y 
Sbjct: 669 FDPKNDLVNPEEMISLDRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 729 DIIKDRQYTTKADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYL 778



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGTLHLGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     + +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGVLGDWDNPYLTMNFETEAEI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            +   V   E E  
Sbjct: 166 IRTLGKVIQNGHLYKGSKPVHWCLDCASSLAEAEVEYEDKVSPSIYVRFAAVSAAEVEEK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  L   Q  L +   +   + LP  R   V + ++  L  L   R
Sbjct: 226 FNALGKGQGALSAVIWTTTPWTLPSNRAIAVNAELEYQLVQLGDER 271


>gi|304413765|ref|ZP_07395209.1| isoleucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283856|gb|EFL92250.1| isoleucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 938

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 115/350 (32%), Gaps = 37/350 (10%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLS 210
           N VQW+   G     +    +          +  P+     +  + +      L +    
Sbjct: 439 NTVQWIPAWGKARIETMVTHRPDWCISRQRTWGTPMSLFVHKETQALHPRSIELMEQVAI 498

Query: 211 RKTFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
           R     GI+   D                    + VW D+ + + +            A 
Sbjct: 499 RVEQQ-GIQAWWDLDPAEILAEEAADYVKVTDTLDVWFDSGSTHSSVID----SHPELAG 553

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P D+++ G D     F +    A  +    P  + +     +  KG K+SKS+GN I 
Sbjct: 554 HSP-DIYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGKGRKMSKSIGNTIS 612

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P +V  ++G D LR ++       +    D+     R +AD    I N   R +   LK 
Sbjct: 613 PQDVTNKLGGDILRLWVASTDYSREIAVSDE---ILRRSADAYRRIRNTA-RFLLANLKG 668

Query: 373 YDGMIPTPGAFTES--DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
           +D       A      D   +        EI    +N   HR + +++   S      Y 
Sbjct: 669 FDPTQHQLAAQEMIVLDRWAVGRAQEAQVEIITAYENYDFHRVVQRLMHFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D  K  +   K++     +       + + L   +   +   A++I+  L
Sbjct: 729 DIIKDRQYTAKSDSIARRSCQTALFHIAQALVRWMAPILSFTADEIWQYL 778



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 75/271 (27%), Gaps = 15/271 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKIFNLHDGPPYANGNIHIGHAVNKILKDIIIKAKGLSGYDAPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQFVGKPGKKISAAEFRTACRTYATEQIEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+   G +YKG     +     +   + EV               V  +      
Sbjct: 166 IRALAKVIANGHLYKGARPVHWCTDCGSSLAEAEVEYYDKTSTSIDLCFNVLDVAAVCAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F ++   D +     +   + LP  R   + S     L  +          +      + 
Sbjct: 226 FSVATVHDPVSVVIWTTTPWTLPANRAITLCSEFIYQLVQIEGKCLILAADLVETVMKRA 285

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            +  W    +       +L       A   P
Sbjct: 286 AITEWQILGSCSGADLEFLRCQHSFMAFDVP 316


>gi|240047297|ref|YP_002960685.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984869|emb|CAT04862.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 793

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 4/206 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K Y      YP+A   H+GH       D+++R  RL G DVL   G D  G    +
Sbjct: 26  KSLKKFYALDMFPYPSAAGLHLGHPLGYTATDIISRLKRLQGYDVLHPMGWDAFGLPAEQ 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G     F  +N  NFR        SYD    I TT+   +   + ++K +  +  
Sbjct: 86  YAIKTGNHPADFTAKNIENFRRQIKAFGFSYDWEKEIDTTDPAFYYHTQWIFKLLYKQNL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+ +  +G   + +   PV   + + +  +++ Y DKLL
Sbjct: 146 AEIRETDVNWCQDLGTVLANEEIVQDENGNLVSERGGFPVTNKKMKQWVLKITNYADKLL 205

Query: 178 SYYESHPEFILPIERRNEVISFVKSG 203
              +           + + I   K  
Sbjct: 206 EGLKDVDFPDSLKLLQEKWIGKSKGW 231



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 136/384 (35%), Gaps = 52/384 (13%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
             +  +  I+    +     +  +Y   D V+       Y  +  PV + E +  F    
Sbjct: 374 TILQAREKIFLDLSTQNLINQKTSYKIKDWVFSRQ---RYWGEPFPVYFDENDNIFLEEK 430

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             +   +   + + +   P+    + ++F K G K    +     W         Y+ Y+
Sbjct: 431 IVELPYMDKIKPNGDGQSPLASNKKWLTFSKDGQKYRRETNTMPQWAGSSWY---YLAYI 487

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LSA 282
             ++  +YL            K    P DL++ G++    H IY   +         ++ 
Sbjct: 488 LKNSDGSYLNLDSPQALERFKKWL--PVDLYIGGQEHAVGHLIYSRFWHKVLYEAGIVNT 545

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           + P  K V     +   G K+SKS GNVI+P E++E  G DALR FL+          + 
Sbjct: 546 HEPFFKIVNQGMLLGSDGSKMSKSKGNVINPDEILELYGADALRLFLMFMSPLTDVKNWK 605

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G+K          +   + R   +I   Y          T           + + E  
Sbjct: 606 NSGIKS---------MYQWLERVYRVITTSYQYDAKLLKNIT-----FEQTYHKFIAETT 651

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           +++++   + A+++++  ++ + +   +  P +                   +    I+ 
Sbjct: 652 QSIEDLKFNVAISKLMVYINFLSK--QSVLPDKKY-----------------LTSFIIIF 692

Query: 463 QAFVPKLANKIFDILFVADENRCF 486
             F P LA ++ + L   DEN  F
Sbjct: 693 STFAPHLAEELLEKL---DENDLF 713


>gi|325660970|ref|ZP_08149597.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325472477|gb|EGC75688.1| leucyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 807

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +REK Y      YP+    H+GH    +I+DV +R+  L    ++   G D  G      
Sbjct: 32  KREKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKLLQKYYIVHPMGWDAFGLPAENY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMAD--VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   GV   +   +N +N +   +       +D  + TT+   +   + ++ K+  +G  
Sbjct: 92  AIKMGVHPSISTAENVKNIKRQINEIAALYDWDMEVNTTDPEFYKWTQWIFVKMFKEGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+  +   +    +    ++EV  G            V       +  R++ Y ++LL+ 
Sbjct: 152 YEKEFPINWCPSCKTGLANEEVVNGK----CERCGTEVTKKNLRQWMLRITKYAERLLAD 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         + + + I
Sbjct: 208 LDKLDWPEKVKKMQADWI 225



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 98/249 (39%), Gaps = 42/249 (16%)

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
            +  P D+++ G +    H +Y   +         +  + P  K           G K+S
Sbjct: 526 DEMLPVDMYIGGVEHAVLHLLYSRFYTKFLCDIGAIDFDEPFKKLFNQGMITGKNGIKMS 585

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ P +++ + G D+LR + +       D  +D  G+         N + NLV  
Sbjct: 586 KSKGNVVSPDDLVRDYGCDSLRMYELFVGPPELDAEWDDRGIDGVYR--FLNKVWNLV-- 641

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              M  KD D           + + ++ + ++++ +I   +++  ++  ++  +   +++
Sbjct: 642 ---MDSKDKDVS---------ATKEMIKIRNKMVYDITTRLESFSLNTVISGFMEYNNKL 689

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE-- 482
           +                + A     V  E +  LA+LL  F P +A +++  L       
Sbjct: 690 N----------------EIAKKAGGVDKETLSTLAVLLAPFAPHMAEELWQQLGHEGTVF 733

Query: 483 NRCFQSLDQ 491
           N  + + D+
Sbjct: 734 NAGWPTYDE 742


>gi|332160245|ref|YP_004296822.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607185|emb|CBY28683.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664475|gb|ADZ41119.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863046|emb|CBX73178.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 938

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 118/351 (33%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     +   ++          + +P+     +  E +    S L +    R 
Sbjct: 441 VQWIPDWGQARIETMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRSSELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ + + +                
Sbjct: 501 E-QDGIQAWWDLDPAEILGADAADYVKVPDTLDVWFDSGSTHSSVVD----ARPEFGGHS 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L + +
Sbjct: 615 DVMNKLGGDILRLWVASTDYTGE-IAVSDEILKRSADS------YRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        EI E  +N   H  + +++   S      Y
Sbjct: 668 GFDPALHQVKPEEMVVVDRWAVGRAQAAQAEIMETYENYDFHLVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I++ +
Sbjct: 728 LDIIKDRQYTAKGDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWNEM 778



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIVKAKGMSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAACRKYAAEQVEGQKKDFIRLGVLGDWDHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G ++KG     +     +   + EV  
Sbjct: 166 IRALSKIIDNGHLHKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|293391734|ref|ZP_06636068.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952268|gb|EFE02387.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 940

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 132/394 (33%), Gaps = 46/394 (11%)

Query: 118 DIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAY 172
           D  K  Y   +  +    +    + + G + Q    Q       V+W+ + G        
Sbjct: 397 DKIKHSYPHCWRHKTPIIFRATPQWFIGMEVQGLRPQALGEIKQVRWIPDWGQARIEKMV 456

Query: 173 QDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSL-SRKTFDWGIKIPDDPQY--- 226
           +++          + +P+      E        L+ L   +R+    GI+   D      
Sbjct: 457 ENRPDWCISRQRTWGVPMTLFVHKETEELHPRTLELLEEVARRVEKAGIQAWWDLDEKEL 516

Query: 227 -------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G       AD+++ G D     F 
Sbjct: 517 LGADAETYRKVPDTLDVWFDSGSTYSSVVANRPEFEGKA-----ADMYLEGSDQHRGWFM 571

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +       P  + +     +  +G K+SKS+GNV+ P EV+++ G D LR ++  
Sbjct: 572 SSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNVVTPQEVMDKFGGDILRLWVAS 631

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 632 TDYTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPQRDAVKPEEMISL 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   ++       EI++   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 685 DRWAVACALEAQNEIKDAYDNYQFHAVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLA 744

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 745 RRSCQTALWHIAEALVRWMAPILSFTADEIWGHL 778



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGTIHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFVRLGVLGDWDNPYLTMNFNTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ-WMEEEGY 165
                K+   G +YKG     + L   +   + EV              P +  +E EG 
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDRVSPSIYVRFPAESAVEIEGK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 226 FNAVGKGSGKLSAVIWTTTPWTMPSNRAISVNAELEYRLVQLGDER 271


>gi|304317769|ref|YP_003852914.1| leucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779271|gb|ADL69830.1| leucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 814

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H GH Y    AD  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHAGHWYNYGPADSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    QN +        +     +D  + T    ++   + ++ ++  KG  Y+
Sbjct: 90  KTGIHPQDSTLQNIKTMERQLKEMGATFDWDYEVITCLPDYYKWTQWVFLQLYKKGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V +G          + V   +   +F +++ Y ++LL   +
Sbjct: 150 KKAPVNWCPSCKTVLANEQVVEGT----CERCGSEVTKKDLTQWFLKITDYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKMMQRNWIGKSD 225



 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 104/280 (37%), Gaps = 33/280 (11%)

Query: 213 TFDWGIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
               G K   DP  +   +      L                  K  P D ++ G +   
Sbjct: 475 CPKCGGKALRDPDTLDTFVDSSWYFLRYPDNKNDKEPFNKELIDKMLPVDKYIGGAEHAC 534

Query: 270 FHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
            H +Y             L  + P    +     +   G K+SKS GN I P E I E G
Sbjct: 535 MHLLYARFVTKALRDLGYLDFDEPFKSLIHQGIILGPDGNKMSKSRGNTISPDEYINEYG 594

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-P 380
            D  R +L+   A  + G ++ DG+K          +   +SR   +I K  +    +  
Sbjct: 595 SDVFRMYLMFGFAFTEGGPWNDDGIKA---------MSRFISRIERLIDKFTEDKGKSGK 645

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTN 440
              ++ ++ +  V +  ++ + ++ +    + A+A+++ LV+ + +Y            +
Sbjct: 646 NEISKDEKELNYVRNYTIKSVTDDAEKFQFNTAIARIMELVNALYKY------------D 693

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +  +  + +  E I  L  +L  F P  + ++++ +  +
Sbjct: 694 GEVENKNMKLYEETIADLIRVLAPFAPHFSEEMWERMGYS 733


>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 921

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 80/461 (17%), Positives = 153/461 (33%), Gaps = 44/461 (9%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI------ 95
           GLDV      DE G   ++A    G+    + D N    + + +   +   +FI      
Sbjct: 341 GLDV--LCPVDEKGVMTSEAPGFEGMF---YDDANKAITQQLDEKGALVKLEFITHSYPH 395

Query: 96  --RTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             RT +          +   K                    ++  +N             
Sbjct: 396 DWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQ 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            A   P+     E     ++    + +S               N         L     +
Sbjct: 456 RAWGVPIPVFYAENGEPIITDETIEHVSELFRQHG-------SNIWFEKEAKDLLPEGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G       Q IM VW D+ +++                  PADL++ G D    
Sbjct: 509 HPGSPNGT--FTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR +
Sbjct: 561 WFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLW 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTES 386
           +   +    D       LK+   A++   I N   R +   L D+D            E 
Sbjct: 621 V-SSVDYQADVRVSDAILKQV--AEVYRKIRNTF-RFLHGNLFDFDPKTNAVAVEDLREV 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPD 442
           D+ +L   ++++ ++++             + +   +     Y D  K     +   +PD
Sbjct: 677 DQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPD 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           R  ++  V  E +  L  L    +P  A++++  L   +E 
Sbjct: 737 R-RSMQTVFYETLLALVKLSAPILPHTADELWSHLTFVEEQ 776



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +     R+    L +  D      T +  +    
Sbjct: 105 LTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|289670397|ref|ZP_06491472.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 943

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDEMVLLDRWIVHRAHELQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 777 RWIAPVLSFTAEELWGYLPGKHVDNVLFATWYDGLAP 813



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAEFRQKCREYAAEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|261823081|ref|YP_003261187.1| isoleucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261607094|gb|ACX89580.1| isoleucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 937

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 130/399 (32%), Gaps = 42/399 (10%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGY 165
           K +    +  +  Y   +  +    +       V     G    +  +   VQW+ + G 
Sbjct: 390 KGMLLHVEKLQHSYPCCWRHKSPIIFRATPQWFVSMDQKGLRKQSLSEIKGVQWIPDWGQ 449

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               S   ++          + +P+     +  E +    + L +    R     GI+  
Sbjct: 450 ARIESMVANRPDWCISRQRTWGVPMSLFVHKETEALHPRTAELIEAVAKRVE-ADGIQAW 508

Query: 222 DDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            D                    + VW D+ + + +         G       AD+++ G 
Sbjct: 509 WDLDPADVLGADADNYVKVPDTLDVWFDSGSTHASVVEARPEFGGHA-----ADMYLEGS 563

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +  +    P  + +     +  +G K+SKS+GN I P +V  ++G D
Sbjct: 564 DQHRGWFMSSLMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVTNKLGAD 623

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPG 381
            LR ++      G+    D+     + +AD    I N   R +   L  +D       P 
Sbjct: 624 ILRLWIGSTDYSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPQKDSVKPE 679

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +        EI E  ++   HR + +++   S      Y D  K  +   K
Sbjct: 680 EMVVLDRWAVGCAKAAQDEILEAYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++     +       +   L   +   +   A++I+  L
Sbjct: 740 SDSVARRSCQTALYHISEALVRWMAPIMSFTADEIWSYL 778



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAECRKYAAEQIVGQKADFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I D G ++KG     + +   +   + EV  
Sbjct: 166 IRALGRIIDNGHLHKGAKPVHWCVDCGSSLAEAEVEY 202


>gi|190571034|ref|YP_001975392.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357306|emb|CAQ54735.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 1056

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 71/469 (15%), Positives = 143/469 (30%), Gaps = 23/469 (4%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----Y 91
           F+     D+      D  G+   + +  AGV      D   +  +              Y
Sbjct: 345 FYLCQSHDIRAVCPVDNAGKFTTEVSDLAGVHVFDANDTVIKKLKRQGSWFKTEQYIHNY 404

Query: 92  DDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +    K      ++ K        +RD  +    E       
Sbjct: 405 PHCWRTDTPLIYRTMPSWYVAVTKFKGRMTELNKRVNWMPNHIRDGQFGKWLEGAHDWSI 464

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +   +                    L  +   ++    +  +  L
Sbjct: 465 SRNRFWGTPIPVWKSDDAKYPRVD---------VYGSIAELERDFNVKIDDLHRPFIDTL 515

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGK 265
           +        G  +      +   W ++ +       Y         K +PAD     I +
Sbjct: 516 TRPNPDDPTGKSVMRRVPDVFDCWFESGSMPFAQVHYPFENKEWFEKNFPADFITEYIAQ 575

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F+ ++  +  L  + P    +     +  KG+K+SK L N  DP+EV ++ G DAL
Sbjct: 576 TRGWFYTLFVLSTALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDKYGSDAL 635

Query: 326 RYFLVREIACGK-DGFYDKDG-LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
           R+ ++        +   DK+G L + V  ++   I N           D           
Sbjct: 636 RFLMLSGSIVCGGNLLLDKEGNLVRDVLKNVIKPIWNSYHFFTMYANADGIKAEICQDYQ 695

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR 443
           +  D  ++S C   ++ I+ +M N     A   +      ++ ++  +      K++ D+
Sbjct: 696 STIDRYMISKCFEAVEGIQASMNNYNSQEACKILTDFFEVLNNWYIRRSRERFWKSDLDQ 755

Query: 444 AST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             T    V   V   +       +P +   I+  L   + +       Q
Sbjct: 756 DKTDAYNVLYTVFYYMLRAAAPLLPLITETIWQGLQYKETSVHLADFPQ 804



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 23/149 (15%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     I D  AR+  +    V    G D HG      A+         
Sbjct: 51  PPFANGLPHYGHLLTGFIKDAFARYQTMLQKRVERRFGWDCHGLPAEMGAEKELRISGRT 110

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   F  +  +     A  +D   D   +T +K   ++    +K
Sbjct: 111 EIEKFGIEKFNNHCRTSVMKFSSEWEKYVNRQARWVDFHNDY--KTMDKSFMESVMWAFK 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           ++ DKG +Y+      YS   E   ++ E
Sbjct: 169 QLYDKGLVYESIRVVPYSWACETPLSNFE 197


>gi|126658904|ref|ZP_01730047.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619854|gb|EAZ90580.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 959

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 78/427 (18%), Positives = 131/427 (30%), Gaps = 48/427 (11%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI--YKGCYSGWYSLRDEAYYND 138
           ++ A      YD   RT +          +  +    +          W   + E     
Sbjct: 403 KEEAYQHKYPYDW--RTKKPTIFRATEQWFASVKGFREAALTAIKTVQWIPAQGENRITS 460

Query: 139 ---DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
              D        Q       PV +  E      L+    K +    +        E   E
Sbjct: 461 MVSDRSDWCISRQRNWGVPIPVFYNNETNEPL-LTEETIKHIQTIFAEKGSDAWWEMSIE 519

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            +   K      +  + T              M VW D+ ++      +           
Sbjct: 520 ELLPEKYKTDSHNYRKGT------------DTMDVWFDSGSS------WASVAKQRPELK 561

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PAD+++ G D     F +    +  ++   P    +     +  KG K+SKSLGN +DP
Sbjct: 562 YPADIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFILDEKGYKMSKSLGNTVDP 621

Query: 314 IEV---------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
             V             G D LR ++   +    D    K  LK+   +D+   I N   R
Sbjct: 622 NVVINGGKNQKQEPPYGADVLRLWV-SSVDYSSDVPLGKTILKQL--SDIYRKIRNTA-R 677

Query: 365 SVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +   L D+D            E D  +L   + V  E+ +  +     R    V +   
Sbjct: 678 FLLGNLHDFDPKRDAVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCV 737

Query: 421 VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V   + Y D  K   L  ++PD  R  +   V    I  LA  +   +  +A  I+  L 
Sbjct: 738 VDLSNFYLDIAKD-RLYISHPDSMRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFLP 796

Query: 479 VADENRC 485
                + 
Sbjct: 797 YETSEKS 803



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             +     Y N   H+GHA    + D++ ++  L G  V +  G D HG  I        
Sbjct: 53  FILHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSM 112

Query: 60  KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           K+ +  G+T        + F  +             +   +++   T    +      ++
Sbjct: 113 KSKEREGLTPLKLRHKARDFALKTQEEQAKGFKRFGVWGDWENPYLTLTPEYEAAQIGVF 172

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  KG IY+G     +S   +    + E+  
Sbjct: 173 GEMVLKGYIYRGLKPVHWSPSSQTALAEAELEY 205


>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 910

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ T++             +   +PADL++ G D     F++    + 
Sbjct: 518 FTKEMDIMDVWFDSGTSHQGCCA------IREDLTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + V +   +   G K+SKSLGNVI P +V +E+G + +R +    +   +D
Sbjct: 572 AVSGVAPYKELVSAGFVMDGNGNKMSKSLGNVISPNDVGKELGAEIIRLW-SASVDYTQD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK---DYDGMIPTPGAFTESDESILSVCS 395
               KD LK+   ++    I N     +  +     +    +       E D+ ++    
Sbjct: 631 VRISKDILKQV--SETYRKIRNTFRFLLGNLFNGSFNNKTDLVAYENLEELDKYMVLKFE 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRASTVLYVTV 452
           +V+ ++ +  +N   +    ++I+   V     Y D  K    ++  +  +  ++L V  
Sbjct: 689 KVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIEGEDSHKRLSMLTVLY 748

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
            V+ +   LL   +   A +++D +   D
Sbjct: 749 TVLSKSVRLLAPILSFTAEEVYDNMPYED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +  
Sbjct: 47  GKPSYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIEQVL 106

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
            N GV              K +  +     R     L +   +D+   T + +       
Sbjct: 107 VNNGVDRKSMPANKFRNKCKDYALKQVDKQRADFKKLGVLGDWDNPYLTLDPKFEAEQIR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++ K+ DKG IYKG    ++S   E+   + E+   
Sbjct: 167 VFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYH 202


>gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 921

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 80/461 (17%), Positives = 153/461 (33%), Gaps = 44/461 (9%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI------ 95
           GLDV      DE G   ++A    G+    + D N    + + +   +   +FI      
Sbjct: 341 GLDV--LCPVDEKGVMTSEAPGFEGMF---YDDANKAITQQLDEKGALVKLEFITHSYPH 395

Query: 96  --RTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             RT +          +   K                    ++  +N             
Sbjct: 396 DWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQ 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            A   P+     E     ++    + +S               N         L     +
Sbjct: 456 RAWGVPIPVFYAENGEPIITDETIEHVSELFRQHG-------SNIWFEKEAKDLLPEGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G       Q IM VW D+ +++                  PADL++ G D    
Sbjct: 509 HPGSPNGT--FTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR +
Sbjct: 561 WFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLW 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTES 386
           +   +    D       LK+   A++   I N   R +   L D+D            E 
Sbjct: 621 V-SSVDYQADVRVSDAILKQV--AEVYRKIRNTF-RFLHGNLFDFDPKTNAVAVEDLREV 676

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPD 442
           D+ +L   ++++ ++++             + +   +     Y D  K     +   +PD
Sbjct: 677 DQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPD 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           R  ++  V  E +  L  L    +P  A++++  L   +E 
Sbjct: 737 R-RSMQTVFYETLLALVKLSAPILPHTADELWSHLTFVEEQ 776



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +     R+    L +  D      T +  +    
Sbjct: 105 LTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|86156442|ref|YP_463227.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85772953|gb|ABC79790.1| Isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 946

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 85/490 (17%), Positives = 156/490 (31%), Gaps = 58/490 (11%)

Query: 33  VLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--- 89
           V  R+    GL+VL     D  G+   +A + AG   K   + N     D+A    +   
Sbjct: 375 VGLRY----GLEVLNP--VDGAGRFTERAGKYAG---KKIFEANPEIVADLAASGHLLSD 425

Query: 90  -------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS-----GWYSLRDEAYYN 137
                  SY    R             +  +                        E  +N
Sbjct: 426 PKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKATLAEIDRVRWIPHWGRERIHN 485

Query: 138 --DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             ++        Q       PV + E            +++ + +E+             
Sbjct: 486 MIENRPDWCVSRQRTWGVPIPVFYCEGCNEALLSPPVMERVAAAFEAEG----------- 534

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           + ++ +    D +        G       Q I+ VW D+  ++             +   
Sbjct: 535 MEAWYRHPPADFTQGAACPKCGKTEFRREQDILDVWWDSGVSWAAVIER-------EGLE 587

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
            P DL++ G D     FH+    +  L    P  + V +HGFIL + G+ +SKS GN I+
Sbjct: 588 LPVDLYLEGSDQHRGWFHSSLLTSMALRGAAPY-RAVLTHGFILDQHGKAMSKSAGNGIE 646

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E+I++ G D LR ++                      A+    I N +  ++   L  
Sbjct: 647 PSEIIKKYGADILRLWVSASDYR---DDIGLGDQILAGLAEGYRKIRNTIRYALG-ALDG 702

Query: 373 YDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
           +D              D   L+  +   +++ +  ++   H A    +    V     YF
Sbjct: 703 FDPARDAVPEAELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYF 762

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCF 486
           D  K      K +  +  +       + + L  LL   +   A++ +  L     E+   
Sbjct: 763 DVIKDRLYTWKADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWSYLPGRPTESVWL 822

Query: 487 QSLDQRLKPG 496
             L +R +P 
Sbjct: 823 AGLPRRARPA 832



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   HIGHA   I+ DV+ ++  L+G    +  G D HG  I      
Sbjct: 51  KRFVLHDGPPYANGDIHIGHALNKILKDVVVKYRNLNGEVADYIPGWDCHGLPIELKVDK 110

Query: 65  AGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                K              +  +     R+    L +   ++    T  + +       
Sbjct: 111 ELGPKKRELDRPAIIEACRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRT 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + + ++KG +Y+G    ++ + D     + EV  
Sbjct: 171 FARAAEKGFLYRGKKPVYWCITDRTALAEAEVEY 204


>gi|116491156|ref|YP_810700.1| isoleucyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116091881|gb|ABJ57035.1| Isoleucyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 921

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 110/271 (40%), Gaps = 23/271 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 520 FTKEEDIMDVWFDSGSSWSGVMQERSY------LDYPADVYLEGADQFRGWFNSNIITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +        KG+K+SKSLGN+I P +V  ++G + +R +++   +  +D
Sbjct: 574 AVNGIAPYKSVIAQGFVFDDKGQKMSKSLGNIISPNDVANQMGTEIVRLWVMSIDSS-QD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSV 393
               KD LK+   +         +  ++  +L + +   P   +         D+ + + 
Sbjct: 633 VHVSKDILKQVSES------YRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTAD 686

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
            ++ +++  E M     +    Q+I+ V       Y D  K        +     ++  V
Sbjct: 687 FNQFIKDWHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTV 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             E+  +L  LL  F+P  A ++++ L   +
Sbjct: 747 FYEISVKLTKLLTPFLPHTAEELWENLKEPE 777



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIGHA   I  D++ R+  + G +  +  G D HG  I + 
Sbjct: 45  KNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG   K             +  +     +     L +   +D+   T          
Sbjct: 105 LTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWDNPYLTLNPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++  ++ KG IY+G    ++S   E+   + EV   
Sbjct: 165 RVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH 201


>gi|323223516|gb|EGA07841.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
          Length = 854

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 130/403 (32%), Gaps = 48/403 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +       V    +G       +   VQW+ + G     S   +
Sbjct: 309 MQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVAN 368

Query: 175 KLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ---- 225
           +          + +P+     +  + +  ++  L  +    K  +  GI+   D      
Sbjct: 369 RPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEI 428

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ +       Y       +     AD+++ G D     F 
Sbjct: 429 LGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFM 483

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++  
Sbjct: 484 SSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVAS 543

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 544 TDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVL 596

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI +  +    H  + +++   S      Y D  K  +   K +   
Sbjct: 597 DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVA 656

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   L   +   +   A++I+  L    E   F
Sbjct: 657 RRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVF 699


>gi|290890672|ref|ZP_06553742.1| hypothetical protein AWRIB429_1132 [Oenococcus oeni AWRIB429]
 gi|290479647|gb|EFD88301.1| hypothetical protein AWRIB429_1132 [Oenococcus oeni AWRIB429]
          Length = 921

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 110/271 (40%), Gaps = 23/271 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 520 FTKEEDIMDVWFDSGSSWSGVMQERSY------LDYPADVYLEGADQFRGWFNSNIITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +        KG+K+SKSLGN+I P +V  ++G + +R +++   +  +D
Sbjct: 574 AVNGIAPYKSVIAQGFVFDDKGQKMSKSLGNIISPNDVANQMGTEIVRLWVMSIDSS-QD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF-----TESDESILSV 393
               KD LK+   +         +  ++  +L + +   P   +         D+ + + 
Sbjct: 633 VHVSKDILKQVSES------YRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTAD 686

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
            ++ +++  E M     +    Q+I+ V       Y D  K        +     ++  V
Sbjct: 687 FNQFIKDWHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTV 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             E+  +L  LL  F+P  A ++++ L   +
Sbjct: 747 FYEISVKLTKLLTPFLPHTAEELWENLKEPE 777



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIGHA   I  D++ R+  + G +  +  G D HG  I + 
Sbjct: 45  KNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG   K             +  +     +     L +   +D+   T          
Sbjct: 105 LTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWDNPYLTLNPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++  ++ KG IY+G    ++S   E+   + EV   
Sbjct: 165 RVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH 201


>gi|329765511|ref|ZP_08257087.1| isoleucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137949|gb|EGG42209.1| isoleucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 1065

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 66/410 (16%), Positives = 136/410 (33%), Gaps = 26/410 (6%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
             + HH    +  K    K D  +          +  +      + G   + +    +  
Sbjct: 398 CWRSHHPIVWLARKGWFYKLDRLEEKAINAAENVEYFFEQPKNRFLGIIKERHPWCIS-- 455

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               E  +   L  +                 I    ++       L    +   T    
Sbjct: 456 ---RERIWGCPLPVWICVDCKKQNWFFTRKEIIASAAKLPDGPNFELHRPWIDNITIKCK 512

Query: 218 IKIPDD---PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                +    +Y++  W ++ +       Y    D   +K  PA     G D  R  A  
Sbjct: 513 HCNSTNTKREEYVLDTWHNSGSAP-----YSSLTDEEYSKSIPAPFFTEGIDQTRGWAYT 567

Query: 275 WPAFLLSAN----LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                +  N     P    +F    +  KG K+SKS+GNVID  E++E+  VD +R++ +
Sbjct: 568 LLIENVILNNGPVAPFRSFLFQGHVLDEKGGKMSKSIGNVIDGAELLEKYPVDLIRFYFI 627

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG-----MIPTPGAFTE 385
            + +  +   +  + L  R    L       +    +    ++D              T 
Sbjct: 628 WKASPIEPLSFSTEELMSRPYQVLNTLFNLHLYFKQNSEYDNFDNTKNVLWAKESNLLTS 687

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-Y--FDAQKPWELKKTNP 441
            D  +LS   +++++I E  +    H A   V   V + + + Y      + W+ +++  
Sbjct: 688 PDIWLLSKLQKLIKKITERNEVCKFHEAAKAVDDFVINNLSQIYIPITRGELWDEEESKK 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +R   +  V  +V++ L IL+    P  +  ++  +F   ++       Q
Sbjct: 748 NRRLAIYAVLSDVLKTLDILIHPLCPFTSEYLYQTIFNGKKSILLDKWPQ 797



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 65/191 (34%), Gaps = 21/191 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK+         N  PH GH    +I D+  RF+ L G  + F  G D  G  +   A
Sbjct: 34  KPEKIMFIEGPPTMNGIPHAGHLRGRVIKDLWYRFNTLQGKKITFNGGWDTQGLPVELQA 93

Query: 63  QNAG-------------------VTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKR 101
           +                         K  V + +  + ++ ++L +S++      T    
Sbjct: 94  EKEIGVTGGKSEVIEKVGIEKLVEECKRIVKKFNTKWVEVDELLGMSFNHNKAYWTYRDE 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +    + KK  +   + +      Y    +   +  EV +G +     + +  V+  +
Sbjct: 154 FIEREWQVLKKAHENKILEEDFTVIAYCPSCQTSLSHAEVNQGYEEVKDPSLYYKVKLRD 213

Query: 162 EEGYFFRLSAY 172
           E+ Y    +  
Sbjct: 214 EDAYLIVWTTM 224


>gi|219871117|ref|YP_002475492.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782407|sp|B8F5E2|SYI_HAEPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219691321|gb|ACL32544.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 938

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 81/480 (16%), Positives = 149/480 (31%), Gaps = 59/480 (12%)

Query: 43  LDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-DFIRTTE-- 99
             V F  G  +H                   D        +     ++ D  FI TT   
Sbjct: 314 FSVPFILG--DHVTTDGGTGLVHTAPDHGLDDYIVGQKYKLEMAGLVANDGKFISTTPFF 371

Query: 100 --KRHHDTCRILWKKISDKG-----DIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYN 151
             K   +T  ++ +K+ + G     +  K  Y   +  +    +    + + G + Q   
Sbjct: 372 AGKGVFETNDLVLEKLKETGALLKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLR 431

Query: 152 AQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER--RNEVISFVKSGLK 205
            Q       V+W+   G     +   ++          + +P+     NE        L+
Sbjct: 432 KQALGEIKRVRWIPSWGEARIDTMVANRPDWCISRQRTWGVPMTMFVHNETEQLHPRTLE 491

Query: 206 DLSLSRKTF-DWGIKIPDDPQ-----------------YIMYVWIDALTNYLTTTGYLDN 247
            L    K     GI+   D                     + VW D+ + Y +       
Sbjct: 492 ILEEVAKRVEQAGIQAWWDLDPKEVLGEEDAKIYRKVPDTLDVWFDSGSTYASVVQQRPE 551

Query: 248 PDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +G+      AD+++ G D     F +    +       P  + +     +  KG K+SK
Sbjct: 552 FNGNS-----ADMYLEGSDQHRGWFMSSLMLSTATDNKAPYNQVLTHGFTVDEKGRKMSK 606

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           SLGNVI P EV  + G D LR ++           Y  +        + A      +  +
Sbjct: 607 SLGNVIVPSEVWNKNGADILRLWVAS-------TDYTGEIAVSHNILNSAGDTYRRIRNT 659

Query: 366 VSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              +L + +G  P      P      D   +S       +I+E   N   H  + +++  
Sbjct: 660 ARFLLANLNGFDPKRDLVKPEEMIALDRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRF 719

Query: 421 VSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            S      Y D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 720 CSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYL 779



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 16/207 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKRSFILHDGPPYANGNIHLGHAVNHILKDIINKSKTAMGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L I   +D+   T         
Sbjct: 106 VEGLVGKPNENISASEFRQKCREYAKEQVDGQKADFMRLGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            + + V  +  E  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFSAVDPVAVEAK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
           F        ++ +   +   + LP  R
Sbjct: 226 FNAQGKGSGQISAVIWTTTPWTLPSNR 252


>gi|125624825|ref|YP_001033308.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493633|emb|CAL98620.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071624|gb|ADJ61024.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 932

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 109/279 (39%), Gaps = 29/279 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSS------WNGVLNERDYLSFPADLYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KG K+SKS+GN I P +V ++ G D LR ++        D
Sbjct: 570 AVNGIAPYKAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLWVASIDTE-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +       + +   +  ++  ++ +     P             D+ +L  
Sbjct: 629 VRVSMDILSQ------VSEVYRKIRNTLRFLIANTSDFNPKEDGIDFAELRPVDKYMLVK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDR--ASTV 447
            + ++++IR+   N         +I+ +       Y D  K     +   +P+R    TV
Sbjct: 683 FNELVKQIRKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTV 742

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +YV   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 743 MYV---ILKDLVKVLVPILPHTAEETWTYLEHEPENFAY 778



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG+  K             +  +     R     L +   +D    T    +     
Sbjct: 105 LAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEY 200


>gi|53803700|ref|YP_114671.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81681450|sp|Q605M7|SYI_METCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53757461|gb|AAU91752.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 939

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 104/271 (38%), Gaps = 23/271 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+   +            +    +PADL++ G D     F +    +  +S   P
Sbjct: 534 LDVWFDSGVTHHAVLA------QNPDLAFPADLYLEGSDQHRGWFQSSLMTSVAMSGQAP 587

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G+K+SKS GNV+ P +V++ +G D LR ++      G+    D+  
Sbjct: 588 YKAVLTHGFTVDAEGKKMSKSRGNVVAPQKVMQTLGADVLRLWVAATDYRGEMTVSDE-- 645

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
           + KR+ +D+   I N   R +   L  +D  +    P      D  ++     + QE+ E
Sbjct: 646 ILKRI-SDVYRRIRNTA-RYLLANLDGFDPALHLVKPEDMLALDRWVVDRALAIQQEVIE 703

Query: 404 NMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK-KTN--PDR-ASTVLYVTVEVIRQ 457
             +    +    +      V     Y D  K  +   KT+  P R   T +Y   E +  
Sbjct: 704 AYETYQFNTIFQKTHHFCSVDLGSFYLDVLKDRQYTCKTDSLPRRSGQTAMYHIAEAM-- 761

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQS 488
               L   +   A +I+  L    E   F S
Sbjct: 762 -VRWLAPVLSFTAEEIWQYLPGQREESVFLS 791



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 15/160 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+K  +     Y N + HIGHA   I+ D + +   L G D  +  G D HG  I    
Sbjct: 46  GRDKFILHDGPPYANGEIHIGHAVNKILKDFIVKSRTLSGFDAPYVPGWDCHGLPIELMV 105

Query: 63  QN------AGVTTKVF---VDQNSRNFRDMADVLDI------SYDDFIRTTEKRHHDTCR 107
           +         V+   F     + +    D+     I       +++   T + R      
Sbjct: 106 EKKIGKAGHKVSPAEFRKACREYAAAQVDLQRREFIRLGVLGDWENPYLTMDFRFEADIV 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               +I+ +G + KG     + L   +   + EV      
Sbjct: 166 RALGRIAARGHLAKGAKPVHWCLDCGSALAEAEVEYENKH 205


>gi|326479816|gb|EGE03826.1| isoleucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 1078

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 13/277 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 519 EEVFDCWFESGSMPYASQHYPFKNKERFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGLVMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D M       T     D  IL+ C
Sbjct: 639 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENVDYMFDPKAESTNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
           V+  L   L  F P + + I+  L   + ++ R   S
Sbjct: 759 VLYTLVRGLAPFTPFITDTIYLRLLPHIPEKLRGEDS 795



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V + S  +R   D L   I +D+  +T +   
Sbjct: 90  IDKMLGMSGSEAVEKIGLGAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKTMDTTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESIWWILKQLFDKGVVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|326471131|gb|EGD95140.1| isoleucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 1078

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 13/277 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 519 EEVFDCWFESGSMPYASQHYPFKNKERFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGLVMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D M       T     D  IL+ C
Sbjct: 639 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENVDYMFDPKAESTNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
           V+  L   L  F P + + I+  L   + ++ R   S
Sbjct: 759 VLYTLVRGLAPFTPFITDTIYLRLLPHIPEKLRGEDS 795



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V + S  +R   D L   I +D+  +T +   
Sbjct: 90  IDKMLGMSGSEAVEKIGLGAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKTMDTTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESIWWILKQLFDKGVVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|325495943|gb|EGC93802.1| isoleucyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 938

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EID-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARHSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|240948306|ref|ZP_04752692.1| isoleucyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297345|gb|EER47886.1| isoleucyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 937

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 68/402 (16%), Positives = 129/402 (32%), Gaps = 46/402 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKSVRWIPAWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ----- 225
           ++          + +P+     NE         + L +  K  +  GI+   D       
Sbjct: 458 NRPDWCISRQRTWGVPMTMFIHNETEELHPRTEEILEIVAKRVEEKGIQAWWDLDPAEVL 517

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + Y +        +G+      AD+++ G D     F +
Sbjct: 518 GEEAKDYRKVPDTLDVWFDSGSTYASVVEARPEFNGNS-----ADMYLEGSDQHRGWFMS 572

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +   +   P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++   
Sbjct: 573 SLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNGADILRLWVAS- 631

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESD 387
                   Y  +        + A      +  +   +L + +G  P      P      D
Sbjct: 632 ------TDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKRDLVKPEEMIALD 685

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRA 444
              +S       +I+E   N   H  + +++   S      Y D  K  +   K +    
Sbjct: 686 RWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLAR 745

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            +       +   L   +   +   A++I+  L   +E   F
Sbjct: 746 RSCQTALWHISEALVRWMAPILSFTADEIWGYLPQVEERSEF 787



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     + +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRQACREYAKEQVEGQKADFIRMGVLGDWDNPYLTMNFNTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+   G +YKG     + L   +   + EV  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY 202


>gi|225023694|ref|ZP_03712886.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
 gi|224943576|gb|EEG24785.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
          Length = 927

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 24/279 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +               WPADL++ G D     F +            P
Sbjct: 533 MDVWFDSGSTHFSVLKQRP------ELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +   G K+SKS+GNV+ P EV  E G D LR +            Y  + 
Sbjct: 587 YKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAA-------TDYSGEL 639

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQE 400
              +            +  ++S +  +     P   A       E D   L +  ++ ++
Sbjct: 640 AISKEILKRVTESYRRIRNTLSFLFANLKDFNPIEDAVPQADMVEIDRYALVLARQLQEK 699

Query: 401 I-RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIR 456
           +   +      H A+  ++   SE     Y D  K      K +     +       + R
Sbjct: 700 VSGSHYPRYAFHFAVQDIVQFCSEDLGAFYLDILKDRLYTTKKDGHARRSAQTALYHITR 759

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            L +L+   +   A + +DI+   +E+           P
Sbjct: 760 SLVLLMSPILCFTAEEAWDIIGGGEEDSVLYHTMHDFPP 798



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I    
Sbjct: 47  GRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPIEVMV 106

Query: 63  QNAG---VTT---KVFVDQNS-----RNFRDMADVLDI-SYDDFIRTTEKRHHDTCRILW 110
           +      +     +    Q +     R  +D   +  I  ++D   T + +         
Sbjct: 107 EKLHGKEMPPSKFRELCRQYAGEQILRQKKDFIRLGVIGDWEDPYLTMDYQTEADTVRTL 166

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +I   G +Y+G     + L   +   + EV  
Sbjct: 167 GEIYKAGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|315171940|gb|EFU15957.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
          Length = 933

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+QEIREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 IFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|289662725|ref|ZP_06484306.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 943

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDEMVLLDRWIVHRAHELQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 777 RWIAPVLSFTAEELWGYLPGKHVDNVLFATWYDGLAP 813



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAEFRQKCREYAAEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|315029692|gb|EFT41624.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
          Length = 933

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 103/273 (37%), Gaps = 24/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 523 FTKETDIMDVWFDSGSSHEGVLRER------EELTFPADMYLEGSDQYRGWFNSSITTSV 576

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 577 AINGVAPYKSIISQGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDAEAD 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L      +  + +   +  ++  +L +     P             D+ +   
Sbjct: 636 VRVSMDIL------NQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVR 689

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
            ++V+Q+IREN  +          V++   V     Y D  K     +   D     +  
Sbjct: 690 LNQVIQQIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQT 749

Query: 451 T-VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
              + +  L  LL   +P  A +I+  L   +E
Sbjct: 750 VFYQTLVSLTKLLTPIIPHTAEEIWSFLQEEEE 782



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 52  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQV 111

Query: 62  AQNAGVTTKVFVD-QNSRNFRDM-----------ADVLDISYDDFIR--TTEKRHHDTCR 107
             N GV  K     +     ++               L +S D      T +  +     
Sbjct: 112 LTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 172 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 207


>gi|269123856|ref|YP_003306433.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315182|gb|ACZ01556.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 928

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 108/294 (36%), Gaps = 20/294 (6%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
             + I+ VW D+  ++                  P DL++ G D     F +    +   
Sbjct: 527 KERSILDVWFDSGVSHRAVLRPRGYNIR------PVDLYLEGSDQHRGWFQSSLLTSVAS 580

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + + P  K +     +  +G K+SKSLGN I P ++I+  G D LR ++   +   +D  
Sbjct: 581 TFDSPYKKLLTHGFVMDGQGRKMSKSLGNTITPKDIIDVHGADILRLWV-SSVDYREDVR 639

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
              + +++    D    I N     +  I               E D+  +     + ++
Sbjct: 640 ISDNIIQQ--MTDSYRKIRNTARYLLGNINDFDRSNKVAYDDMLEIDKWAMHKLEELKEK 697

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIR 456
           + ++ +N   +    +++   S      Y D  K       K + +R  +   V V+++ 
Sbjct: 698 VTKHYENYEFYSLFQEILYFCSVEMSSFYLDIIKDRLYCEYKDSLER-RSAQSVLVDILD 756

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ-RLKPGFM---LHKTFDPI 506
            L  ++   +   A +I++ L    +          + KP  M   L K +  +
Sbjct: 757 VLVRIISPVLSFTAEEIWERLDYEGKEESVHLASWIKAKPEHMNEELAKKWQIL 810



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           E+   ++     Y N   HIGHA   ++ D++ ++ RL G +  +  G D HG  I    
Sbjct: 50  EKPTFFLHDGPPYANGNLHIGHAINKVLKDIILKYKRLQGFNAPYIPGWDTHGLPIEWKM 109

Query: 59  ---------AKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                      +        K +  ++    +     L I   +++   T  K       
Sbjct: 110 IQDLGEKAKEMSPLELRNACKKYALKSVEMQKKDFIRLGILGDWNNPYITLNKEFEAEEL 169

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +++ I + G +YKG    ++S   E    + E+  
Sbjct: 170 RVFRDIYENGYVYKGLKPVYWSPTTETALAEAEIEY 205


>gi|238852506|ref|ZP_04642918.1| leucine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834853|gb|EEQ27078.1| leucine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 804

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIISRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 134/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    K           +   N          Q Y  +  PV   E+
Sbjct: 374 KHINSDFLDGLDNEEAKKKMIEWLEDHNAGQKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L+      D   +   
Sbjct: 434 GTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++          K+ P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      ++D  
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGE 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+      + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +    DE+  +    +   P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESISYAKWPEY-DPAKLVESTVE 745


>gi|30061594|ref|NP_835765.1| isoleucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|30039836|gb|AAP15570.1| isoleucine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|313646599|gb|EFS11060.1| isoleucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 938

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWLPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGECEKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|16081220|ref|NP_393519.1| valyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|74544932|sp|Q9HM29|SYV_THEAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10639187|emb|CAC11189.1| valyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 791

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 85/479 (17%), Positives = 156/479 (32%), Gaps = 46/479 (9%)

Query: 36  RFHRLDGLDVLFTT-GTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLD----IS 90
           R+  L G +      G        A    N G   ++      +N  D+    +    IS
Sbjct: 227 RYRDLIGKEATVPIFGNHVRIMADASVDMNFGTGAEMVCTFGDQNDLDLWKKYNLPLKIS 286

Query: 91  YDDFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            D   R TE+          D  + + + + + G + K           E      E++ 
Sbjct: 287 IDKDGRMTEEAGPLKGLSISDARKKIVEILREGGHVVKEESIKHSVNTHERCGTPIEIFI 346

Query: 144 GADGQY--------YNAQHNPVQWMEE------EGYFFRLSAYQDKLLSYYESHPEFILP 189
                         +      ++W  E      E +   L          Y   P  +  
Sbjct: 347 EKQWFIKYLDLKDAFIENGRKIEWTPEYMRVRYENWVNGLKWDWLISRQRYYGVPFPVWY 406

Query: 190 IERRNEVISFVKSGLKD----LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYL 245
                  +   +S L         S+K    G       + +M  W  +           
Sbjct: 407 CADCGNTVYADESELPVDPRIQKPSKKCDRCGSTNLVPERDVMDTWATSSLTPRIALT-- 464

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKI 303
               G   K++P DL   G DI+ F A      + +    +P  + + S       GEK+
Sbjct: 465 --HFGLFDKYYPEDLRGQGHDIISFWAFTTIARSKIHDDRIPWFRIMISGNVYDMYGEKM 522

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GN++D   +I++ G DALR++    ++ G D         +     +       + 
Sbjct: 523 SKSKGNIVDIYSMIDKYGADALRFW-ASTVSQGDDIRIKDQDFTRGRRTVIKMYNAKKLI 581

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS- 422
                ILK    +          +  IL+  SR+++ I  +M N  + +A   + +    
Sbjct: 582 D----ILKGDRKIRLFEDVKHPVNRWILTEDSRIMETITTHMDNYEVSKARTALDTFFWN 637

Query: 423 -EVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D Y +  KP   K +   + D     +Y   +V+  +A      +P +A +I+  +
Sbjct: 638 VFCDNYLEMIKPIIQKASAAGDYDTVDETVYTASKVMLDVAKAYAPIMPFIAEEIYQTI 696



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 57/147 (38%), Gaps = 16/147 (10%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R+K++ I T     + + H+GH++     D +AR+ R+ G  V F  G D++G    + 
Sbjct: 28  DRDKVFAIDTPPPTVSGKMHMGHSFSYPHIDFIARYKRMRGYHVFFPWGFDDNGLPTERY 87

Query: 62  AQNAGVT-------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
            +                   K   + + ++  +    + +S  + D+  T+        
Sbjct: 88  VEKETGIKPSDSNVEEFIRLCKEISESSEKSLLEGWKRIGMSCYFKDYYVTSSPESIRIS 147

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
           + ++  +  KG +Y+           +
Sbjct: 148 QSMFLDLVRKGRVYRDLAPSIRCPTCK 174


>gi|127512032|ref|YP_001093229.1| isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229769|sp|A3QBX2|SYI_SHELP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126637327|gb|ABO22970.1| Isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 940

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 136/407 (33%), Gaps = 43/407 (10%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +       +     G    +  +    QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDQKGLRTQSLSEIEKTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +    R     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVHRDTEELHPDSVALMERVAHRIE-QEGIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +        +G      P DL++ G D     F +
Sbjct: 521 GEEADQYRKVTDTLDVWYDSGSTFSSVVAARPEYNGH-----PVDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  +G K+SKS+GNVI P++V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGQGRKMSKSIGNVIAPLQVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESI 390
              G+    D+     + +AD    I N   R +   L  +D +  T         D  +
Sbjct: 636 DYSGEMTVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPVNDTVAIEDMVALDRWV 691

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRASTV 447
           +   + +  EI E  +    H    +++   S      Y D  K  +   K +     + 
Sbjct: 692 VRRAAALQAEILEAYEQYNFHLVTQKLMQFCSVELGSFYLDIIKDRQYTAKRDSLARRSC 751

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRL 493
                 +   +   +   +   A++++  L    E   F Q+  + L
Sbjct: 752 QSALFLIAEAMVRWIAPILSFTADEVWQSLPGEREEFVFTQTWFEGL 798



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    + 
Sbjct: 49  KPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELKVEQ 108

Query: 65  AGVTT--KVFVDQNSRNFRDMADV-LDISYDDFIR 96
                  KV   +  +  R+ A   +D   +DFIR
Sbjct: 109 KVGKPGQKVSAAEFRQKCREYAAAQVDGQREDFIR 143


>gi|302186396|ref|ZP_07263069.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 499

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 70/423 (16%), Positives = 134/423 (31%), Gaps = 46/423 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G + +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R  +     +    ++  + D G     D
Sbjct: 63  QGVDPVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALGDAGAIECRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------YYNAQHNPVQW 159
             +           EA+   +  Y GA+                            P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAALMTDLRCKLCSQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L                    +      L D  ++R   D G+ 
Sbjct: 183 KNAHREFLKLAGFKPQLRDRLLGQSWRKPLDSW----LRDSLEHLHDWGVTRPG-DAGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADRVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLSALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 +G +            LA           +++    +           +D  +L
Sbjct: 358 IAPEESEGDFRLAQF-------LAWRTEVFNEFFPALLDAGSNRDDSWWSGLCGADAGLL 410

Query: 392 SVC 394
              
Sbjct: 411 EAL 413


>gi|167038923|ref|YP_001661908.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913487|ref|ZP_07130804.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723498|ref|YP_003903249.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166853163|gb|ABY91572.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890172|gb|EFK85317.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580559|gb|ADN53958.1| leucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 816

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLKEMGATFDWDYEVITCLPEYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQRNWIGKSD 225



 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 110/298 (36%), Gaps = 41/298 (13%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-- 377
            G D  R +L+   A  + G ++ DG+K          I   V+R    I K  +     
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKA---------ISRFVNRVERFIDKFIETKNNP 643

Query: 378 -PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T     + +  +  V    ++ + E+ +    + A+A+++ LV+ + +Y         
Sbjct: 644 GKTKDEMGKDENELNYVRHYAIKSVTEDAERFQFNTAIARIMELVNALYKY--------- 694

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                     + +   +V+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 695 --DTDVEVKNIEFY-EDVVADLIRLLAPFAPHFSEEMWEKLGYEYSVFNQKWPKWDEK 749


>gi|116629123|ref|YP_814295.1| leucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311111095|ref|ZP_07712492.1| leucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273879|sp|Q045L5|SYL_LACGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116094705|gb|ABJ59857.1| leucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311066249|gb|EFQ46589.1| leucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 804

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIISRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 134/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    +           +   N          Q Y  +  PV   E+
Sbjct: 374 KHINSDFLDGLDNEEAKKRMIEWLEDHNAGQKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L+      D   +   
Sbjct: 434 GTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++          K+ P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      ++D  
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGE 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+      + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +    DE+  +    +   P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESISYAKWPEY-DPAKLVESTVE 745


>gi|300362219|ref|ZP_07058396.1| leucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354838|gb|EFJ70709.1| leucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 804

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIISRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 69/415 (16%), Positives = 134/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    +           +   N          Q Y  +  PV   E+
Sbjct: 374 KHINSDFLDGLDNEEAKKRMIEWLEDHDAGQKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L       D   +   
Sbjct: 434 GTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLIDWVNVIDENGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++    D    K W P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      ++D  
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGE 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+      + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +L   DE+  +        P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVLG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|28210096|ref|NP_781040.1| leucyl-tRNA synthetase [Clostridium tetani E88]
 gi|28202532|gb|AAO34977.1| leucyl-tRNA synthetase [Clostridium tetani E88]
          Length = 828

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+    H GH +    +D  ARF R+ G +V    G D  G      A 
Sbjct: 47  KKLYVLEMFSYPSGSNLHAGHWFNYGPSDSWARFKRMQGFNVFQPMGFDSFGLPAENYAI 106

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             GV  K    +N          +     +D+ + T+E  ++   + ++ ++      Y+
Sbjct: 107 KTGVHPKDSTMKNIETMTKQLKSMGAMFHWDNEVITSEPEYYKWTQWMFLQLYKNNLAYR 166

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  GA         + V   +   +FF+++ Y ++LL   +
Sbjct: 167 KNAPVNWCPSCNTVLANEQVLDGA----CERCSSDVIKKDLTQWFFKITDYAEELLEKLD 222

Query: 182 SHPEFILPIERRNEVI 197
                      +   I
Sbjct: 223 DLDWPENTKSMQKHWI 238



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 88/232 (37%), Gaps = 27/232 (11%)

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P D +V G +    H +Y   F         L+ + P          +   G K+SKS G
Sbjct: 535 PVDKYVGGPEHACMHLLYARFFTKALRDMGYLNFDEPFSSLTHQGLILGPDGLKMSKSKG 594

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N I P + I+E G D  R +L+      + G +  +G+K        +   + V R+++ 
Sbjct: 595 NTISPDDYIDEFGSDVFRMYLMFGFDYTEGGAWSDEGIKS------VSRFVDRVERTLAS 648

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                +           +++ +  V    ++ I E+ +    +  +A+++   + + +Y 
Sbjct: 649 CRYYINNPSDDKITIDNNEKDLNFVRHNSIKSITEDAEKMQFNTCIARLMEYTNALSKYI 708

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           +          N +          E +    IL+  F P  + + +++L + 
Sbjct: 709 NE--------DNKNSK-----FLKECVEDFIILIAPFAPHFSEEQWELLGMT 747


>gi|324012345|gb|EGB81564.1| isoleucine--tRNA ligase [Escherichia coli MS 60-1]
          Length = 938

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKARQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|262038685|ref|ZP_06012045.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747237|gb|EEY34716.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 932

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 24/300 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G+K+    + IM VW D+  ++                  PADL++ G D     F +  
Sbjct: 526 GVKLR-KERSIMDVWFDSGASHRGVLIPRGLHR-------PADLYLEGSDQHRGWFQSSL 577

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +   + + P  + +     +  +G K+SKSLGN I P ++IE+ G D LR ++   + 
Sbjct: 578 LTSIASTKDAPYKRILTHGFVMDGQGRKMSKSLGNTIVPKDIIEKYGADILRLWV-SSVD 636

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSV 393
             +D    ++ L++   +D    I N     +  +   DY+          E D+  L  
Sbjct: 637 YREDVRISENILQQ--MSDAYRRIRNTARFLMGNLNDFDYENKKVDYEEMYEIDKWALHK 694

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLY 449
              + ++  E       +    ++     +     Y D  K   L     D     +   
Sbjct: 695 LEELKEKTTEYYDKYEFYSLFQEITYFCSIDMSAFYLDIVKD-RLYCEEKDSIERRSAQT 753

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKPGFM---LHKTFD 504
           V  EV++ L  ++   +   A +I++ +   +  E     S    L+P +    L K +D
Sbjct: 754 VLTEVLKVLVRVISPVLSFTAEEIWERIPESLKKEESVHLSEWVELEPKYKNNELAKKWD 813



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 16/159 (10%)

Query: 1   MKEREKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           +K+  + ++      Y N   HIGHA   ++ D++ ++ RL G +  +  G D HG  I 
Sbjct: 50  LKDEGQYFVLHDGPPYANGDIHIGHALNKVLKDIILKYKRLRGYNAPYIPGWDTHGLPIE 109

Query: 60  KAAQNA------GVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                        +T        K +  +     +     L I  ++DD   T +  +  
Sbjct: 110 WKIMEEYGEKARNMTPLQIRQECKKYALKWVEKQKAEFIRLGILGNWDDPYITLKPEYEA 169

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++K+I + G +YKG    ++S   E    + E+  
Sbjct: 170 EQLKVFKEIYENGYVYKGLKPVYWSPTTETALAEAEIEY 208


>gi|218258639|ref|ZP_03474967.1| hypothetical protein PRABACTJOHN_00622 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225314|gb|EEC97964.1| hypothetical protein PRABACTJOHN_00622 [Parabacteroides johnsonii
           DSM 18315]
          Length = 945

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D +G    +
Sbjct: 28  TDKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLQGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V   +N   +R+  D +  SYD    IRT +  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPEVTTKKNIARYREQMDKIGFSYDWSREIRTCDPEYYKWTQWAFIQMFNSYY 147

Query: 119 IYKGCY 124
                 
Sbjct: 148 CNNKKQ 153



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 92/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDILDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E             
Sbjct: 785 QITDAEPT-ADE--LKSLHKLIKKVTYDIEHFSYNTSISAFMICVNE------------- 828

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   S++      ++ QL +LL  F P  A +++    
Sbjct: 829 -------LSSLKCNKRTILEQLIVLLAPFAPHTAEELWHTCG 863


>gi|302509952|ref|XP_003016936.1| hypothetical protein ARB_05230 [Arthroderma benhamiae CBS 112371]
 gi|291180506|gb|EFE36291.1| hypothetical protein ARB_05230 [Arthroderma benhamiae CBS 112371]
          Length = 1078

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 13/277 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 519 EEVFDCWFESGSMPYASQHYPFKDKERFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGLVMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D M       T     D  IL+ C
Sbjct: 639 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENVDYMFDPKAESTNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
           V+  L   L  F P + + I+  L   + ++ R   S
Sbjct: 759 VLYTLVRGLAPFTPFITDTIYLRLLPHIPEKLRGEDS 795



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      K  V + S  +R   D L   I +D+  +T +   
Sbjct: 90  IDKMLGMSGSEAVEKIGLEAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKTMDTTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESIWWILKQLFDKGVVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|161528628|ref|YP_001582454.1| isoleucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339929|gb|ABX13016.1| isoleucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 1065

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 69/479 (14%), Positives = 147/479 (30%), Gaps = 38/479 (7%)

Query: 45  VLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
           V  +    E   KIA   +    +      + +        +     D  I    K  + 
Sbjct: 325 VHLSPANGEEDIKIANKRKVKIFSPIDDEVKFTSQAGKYQGMFVRDADRPIVEDLKECNA 384

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD-------------EVYKGADGQYYN 151
               + K        ++  +   +  R   +Y  D             E Y       + 
Sbjct: 385 LV-KIGKIKHKYPLCWRSHHPIVWLARKGWFYKLDRLDNKAIDAAESVEYYFEQPKNRFL 443

Query: 152 AQHNPVQWME---EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                        E  +   L  +  +  +           +E  + +       L    
Sbjct: 444 GIIKERHPWCISRERIWGCPLPVWACEECNERNWFFTRKEIVESADNLPDGPDFELHRPW 503

Query: 209 LSRKTFDW---GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           +   T      G       +Y++  W ++ +       Y    D       PA     G 
Sbjct: 504 IDNITIKCKKCGSTKTKREEYVLDTWHNSGSAP-----YSSLTDEEYTNEIPAPFFTEGI 558

Query: 266 DILRFHAIYWPAFLLSAN----LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVG 321
           D  R  A       +  N     P    +F    +  KG K+SKS GNV++ IE++E+  
Sbjct: 559 DQTRGWAYTLLIENVILNNGPTPPYKSFLFQGHVLDEKGGKMSKSKGNVLEGIELLEKYP 618

Query: 322 VDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
            D +R++ + + +  +   +  + L  R    +       +    +    +++       
Sbjct: 619 ADLIRFYFMWKASPIEPLSFSTEELMSRPYQVINTLFNLHLYFKQNSQYDNFEKENTIEW 678

Query: 382 A-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-YF--DAQK 432
           A      T  D  +LS   +++ +I +   +   H     +   + + + + Y      +
Sbjct: 679 AKQKNLLTSPDIWLLSKLQKLISKITDRNDSCKFHEGAKAIDDFIINNLSQIYIPITRGE 738

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
            W+  +   +R   +  V  EV+R L IL+  F P  +  ++  +F   ++       +
Sbjct: 739 LWDEDEDKKERRLAIYAVLEEVLRTLDILIHPFCPFTSEHLYQTVFDGKQSILLDKWPK 797



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 21/191 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK+         N  PH GH    +I D+  R++ L G  + F  G D  G  +    
Sbjct: 34  KPEKIRFIEGPPTMNGIPHAGHLRGRVIKDLWYRYNTLQGKKIEFNGGWDTQGLPVELQV 93

Query: 63  QNA-------------------GVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKR 101
           +                         K  V++ ++ + ++ ++L +S+  D    T    
Sbjct: 94  EKELGVTGGKTEAIKQFGVERIVSECKKVVEKYNKTWVEVDELLGMSFNHDKAYWTFRDE 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
             +    + KK  + G + +      Y    +   +  EV +G +     + +  V+ ++
Sbjct: 154 FIEREWQVLKKAHENGILEEDFTVIAYCPSCQTSLSHAEVNQGYEEVKDPSLYYKVKLVD 213

Query: 162 EEGYFFRLSAY 172
           E+ +    +  
Sbjct: 214 EDVFLIVWTTM 224


>gi|71735559|ref|YP_274611.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71556112|gb|AAZ35323.1| unnamed protein product [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 499

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 127/392 (32%), Gaps = 39/392 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            G        +NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGGDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+   +  Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTGLHCKLCRQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    F +L+ ++  L                 +  +      L D  ++R   D G+ 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLSALRDIEVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                 +G +     +       +     L+ 
Sbjct: 358 IAPEQSEGDFRLTHFRAWREQIFSQFFPALLD 389


>gi|71852743|gb|AAZ50766.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 795

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 6/189 (3%)

Query: 12  AIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
              YP+    H+GH       D+L+RF R  G +VL   G D  G    + A + G    
Sbjct: 1   MFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPA 60

Query: 71  VFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            F  +N  NF+   + L  SY  D  + TT+  ++   + ++ K+ +KG  Y+      +
Sbjct: 61  EFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNW 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                    ++EV      +       PV       +  +++AY ++LL   E       
Sbjct: 121 VEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLEDLEEVDWPES 177

Query: 189 PIERRNEVI 197
             + +   I
Sbjct: 178 IKDMQRNWI 186



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 98/308 (31%), Gaps = 82/308 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA---KFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +     K W P D++V G +    H +Y   + 
Sbjct: 449 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 508

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 509 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 568

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+           
Sbjct: 569 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSR-------- 620

Query: 359 GNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
              + R   +I         T     E+  ++  V +  ++ + E +     + A+AQ++
Sbjct: 621 -KFLDRVYRLIT--------TKEITEENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLM 671

Query: 419 SLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             V+  ++  + +   +  K                      L+  F P L  +++  L 
Sbjct: 672 VFVNAANK--EDKLFSDYAKG------------------FVQLIAPFAPHLGEELWQALT 711

Query: 479 VADENRCF 486
            + E+  +
Sbjct: 712 ASGESISY 719


>gi|26553840|ref|NP_757774.1| leucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|29336535|sp|Q8EW18|SYL_MYCPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|26453847|dbj|BAC44178.1| leucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 799

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 73/199 (36%), Gaps = 4/199 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y      YP+    H+GH       DV ARF R  G  VL   G D  G    + 
Sbjct: 28  KKPKFYALDMFPYPSGAGLHMGHVKSYTPTDVYARFKRYQGYSVLHPMGWDAFGLPAEQF 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A         F DQN  NF+   D L   +D    + TT+   +   + ++ K+ + G  
Sbjct: 88  ALATKNHPATFTDQNINNFKLQIDQLGFWFDWNKEVNTTDPNFYKWTQWIFIKLFENGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLS 178
                   +         ++EV     G   + +   PV     + +  +++ + D+L+ 
Sbjct: 148 EIKDIDVNWCQELGTVLANEEVLTDEKGNKVSERGKYPVIKKPMKQWVLKITKFADQLID 207

Query: 179 YYESHPEFILPIERRNEVI 197
             E     +     + + I
Sbjct: 208 DLELTDWTVGLKNIQKKWI 226



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 91/230 (39%), Gaps = 45/230 (19%)

Query: 252 KAKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKI 303
             ++ P D+++ G++    H +Y   +         +    P  K + + G IL  GEK+
Sbjct: 518 FKRWLPVDIYIGGQEHAVLHLLYARFWHKFLHQINVVPNKEPFYK-IINQGMILVNGEKM 576

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV++P + +   G DALR +++          +++ G+         +G+   V 
Sbjct: 577 SKSKGNVVNPSDFVVSHGADALRLYMMFMGPITASLPWEESGI---------DGMYKWVQ 627

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   +                 +DE++     + +++  E M+N   +  +++++  ++E
Sbjct: 628 RVYRL-------FETKQIDKNFNDENLEKKYHQFVKKASEFMENFDFNLVISEMMIFINE 680

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
             +Y                      +  + +    ++L  F P +  +I
Sbjct: 681 CYKY--------------------EKINYDYMLNFCVILSCFAPFITEEI 710


>gi|320328489|gb|EFW84491.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330885656|gb|EGH19805.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 499

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 128/392 (32%), Gaps = 39/392 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGVDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+   +  Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTGLHCKLCRQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    F +L+ ++  L                 +  +      L D  ++R   D G+ 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLSALRDIEVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                 +G +     +       +     L+ 
Sbjct: 358 IAPEQSEGDFRLTHFRAWREQIFSQFFPALLD 389


>gi|260906310|ref|ZP_05914632.1| valyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 881

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 94/260 (36%), Gaps = 13/260 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           DP  ++  W  +        G+  + D   +K +P DL   G DI+     +    A  L
Sbjct: 522 DPD-VLDTWATSSLTPQLLGGWSRDDDF-FSKVFPFDLRPQGHDIIRTWLFSTVVRANSL 579

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE----VGVDALRYFLVREIACG 336
           +   P      S   +    +K+SKS GNV+ P +++ E     G DA+RY+       G
Sbjct: 580 NDAAPWKHAGLSGWILDPDRKKMSKSKGNVVVPTDILAETKPGFGPDAVRYW-AASAKLG 638

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            D  YD   ++  +   LA  + N  S+           +        + D ++L   + 
Sbjct: 639 SDTAYDVTQMQ--IGRRLAMKLLN-ASKFALAQGVHSGLVGQLGSVTHDLDRALLKKLAE 695

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           V+     +M       AL    S   E  D Y +  K      T  D   +        +
Sbjct: 696 VVDAASTHMAAYDYAHALRAAESFFWEFTDDYVELVKDRSYGATGDDDQLSAHVTLATAL 755

Query: 456 RQLAILLQAFVPKLANKIFD 475
             L  L   F+P +  +++ 
Sbjct: 756 DVLLRLFAPFMPFVTEEVWS 775



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 8/132 (6%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            +RE++Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +
Sbjct: 45  TDREQVYSIDTPPPTASGSLHVGHVFSYTQTDIIARYQRMQGKNVFYPLGWDDNGLPTER 104

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD-------DFIRTTEKRHHDTCRILWKKI 113
             QN    T         +F   A     S D       +FI   EK   +   +  +  
Sbjct: 105 RVQNYYGVTCEPTQSYDPDFAPPAKPPKNSRDFVKVSRQNFIELCEKLSAEDEHVFEELF 164

Query: 114 SDKGDIYKGCYS 125
              G      Y+
Sbjct: 165 RSTGLSVDWKYT 176


>gi|157374333|ref|YP_001472933.1| isoleucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082334|sp|A8FSI2|SYI_SHESH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157316707|gb|ABV35805.1| isoleucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 940

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/410 (15%), Positives = 134/410 (32%), Gaps = 37/410 (9%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD--GQYYNAQHNPVQWMEEEGYFFR 168
           K +      ++      +    + + + D+        G+    Q  P  W +       
Sbjct: 401 KIMHSYPHCWRHKTPIIFRATPQWFISMDQKGLRKQALGEIEQTQWIP-DWGQSRIEKMV 459

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ--- 225
            +     +           L + R  E +      L +   +R   + GI+   D     
Sbjct: 460 ENRPDWCISRQRTWGVPITLFVHRETEELHPDSISLMERVANRIERE-GIQAWWDLDAQE 518

Query: 226 -------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
                          + VW D+ +++ +         G +      DL++ G D     F
Sbjct: 519 LLGDEAEQYRKVTDTLDVWYDSGSSFSSVVASRPEYQGHEI-----DLYLEGSDQHRGWF 573

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +  ++   P  + +     +   G K+SKS+GNVI P  V  ++G D LR ++ 
Sbjct: 574 MSSLMISTAMNGKAPYKQVLTHGFTVDGNGRKMSKSIGNVIAPQTVTNKLGADILRLWVA 633

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDE 388
                G+    D+     + +AD    I N   R +   +  +D +            D 
Sbjct: 634 ATDYSGEMTVSDE---ILKRSADAYRRIRNTA-RFLLANINGFDPVNDLVAVEEMVALDR 689

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRAS 445
            ++   + + +E+ E  +    H    +++   S      Y D  K  +   K +     
Sbjct: 690 WVVRRAAALQEELIEAYEQYNFHVVTQKLMQFCSVELGSFYLDIIKDRQYTAKGDSVARR 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
           +       +   +   +   +   A++I+ +L    E   F Q   Q L+
Sbjct: 750 SCQSALYLISEAMVRWIAPILSFTADEIWQLLPGEREKYVFTQEWYQGLE 799



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GRKPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTLSGFDAPYIPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        KV   Q     R+  A  +D   +DFIR            T +        
Sbjct: 107 EQKVGKPGHKVTAAQFREKCREYAAKQVDGQREDFIRLGVFADWNKPYLTMDFDTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G ++KG     +     +   + EV  
Sbjct: 167 RSLAKVIDSGHLHKGVKPVHWCTDCGSALAEAEVEY 202


>gi|294666946|ref|ZP_06732176.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603318|gb|EFF46739.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 926

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 584 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 643 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDEMVLLDRWIVHRAHELQEKIV 699

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 700 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 759

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 760 RWIAPVLSFTAEELWGYLPGKHVDNVLFATWYDGLAP 796



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 31  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 90

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 91  EKKYGKVGVKLDAAEFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 150

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 151 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 186


>gi|227890482|ref|ZP_04008287.1| leucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849051|gb|EEJ59137.1| leucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 804

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWIFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIIDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 135/417 (32%), Gaps = 56/417 (13%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                       ++++    +           E   N          Q Y  +  PV   
Sbjct: 372 DGKHINSEFLDGLNNEEAKKRMIEWLEDHNVGEKKVNYKLRDWDFSRQRYWGEPIPVIHW 431

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E+                         LP     +     +S L +L+      D   + 
Sbjct: 432 EDGTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLTDWVNVVDENGRK 480

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWP 276
                  M  W  +   YL      ++          K+ P DL++ G +    H +Y  
Sbjct: 481 GKRETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYAR 540

Query: 277 AFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +         +    P  K +++ G IL   EK+SKS GNV++P EVI+E G D+LR +
Sbjct: 541 FWHKVLYDLGVVPTKEPFQK-LYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMY 599

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESD 387
            +          +D +G                + R   + + D D   IP      E+D
Sbjct: 600 EMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQEKIVDEND 650

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +  V +  ++++ E+ +    + A++Q++  ++                    +A T+
Sbjct: 651 GELDKVYAETVKKVTEDFEALHFNTAISQMMVFMNAA-----------------QKAKTI 693

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                E       LL    P +  +I+ +    DE+  +    +   P  ++  T +
Sbjct: 694 PR---EYAEGFVQLLAPVAPHMMEEIWSVFG-HDESIAYAKWPEY-DPAKLVESTVE 745


>gi|281492476|ref|YP_003354456.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376140|gb|ADA65631.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 932

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 29/279 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSS------WNGVLNERDYLSFPADLYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KG K+SKS+GN I P +V ++ G D LR ++    A   D
Sbjct: 570 AVNGVAPYKAVLSQGFVLDGKGRKMSKSIGNTILPKDVTKKFGADILRLWVASIDAE-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +       + +   +  ++  ++ +     P   A         D+ +L  
Sbjct: 629 VRVSMDILSQ------VSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDR--ASTV 447
            + ++++IR    N         +I+ +       Y D  K     +   +P+R    TV
Sbjct: 683 FNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTV 742

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +YV   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 743 MYV---ILKDLVKILVPILPHTAEETWTYLEHEPENFAY 778



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG+  K             +  +     R     L +   +D    T    +     
Sbjct: 105 LAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGAKPIYWSPSSESSLAEAEIEY 200


>gi|9755723|emb|CAC01835.1| valine--tRNA ligase-like protein [Arabidopsis thaliana]
          Length = 1093

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 113/354 (31%), Gaps = 63/354 (17%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER---RNEVISFVKSGLKDLSLSRKT 213
           ++ +  + +F  +    +K L   E+    I+P        E     KS  + L  + + 
Sbjct: 622 IEPLVSKQWFVHMDPLAEKALLAVENKELTIIPERFEKDCEEDYIVAKSAEEALEKALEK 681

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI 273
           +   ++I  DP  ++  W  +     +T G+ D        F+P ++   G        +
Sbjct: 682 YGKDVEIYQDPD-VLDTWFSSSLWPFSTLGWPDVAAKDFNNFYPTNMLETG--------M 732

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
                  +  +P             +G K+SKSLGNVIDP++ I++ G DALR+ +    
Sbjct: 733 VMMGIEFTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTIKDFGTDALRFTIALGT 792

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE----- 388
           A G+D     + L    N    N + N     +  +    D          + D+     
Sbjct: 793 A-GQDLNLSTERLTA--NKAFTNKLWNAGKFVLHSLPSLSDTSAWENLLDLKLDKEETLL 849

Query: 389 -------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
                    +S    ++  +  + +      A                            
Sbjct: 850 SLPLPECWAVSKLHILIDSVTASYEKLFFGDA---------------------------- 881

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                   V + V   +  LL  F+P +   ++  L    E        Q   P
Sbjct: 882 --------VLLYVFENILKLLHPFMPFVTEDLWQALPYRKEALIVSPWPQNSLP 927



 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 22/158 (13%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA  + + D++ R++R++G   L+  GTD  G       +  
Sbjct: 310 PFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKM 369

Query: 66  GVTT---------KVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHDT 105
             +            F  +                + +    D S + F  T +++    
Sbjct: 370 LASEGIKRVDLGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERF--TLDEQLSRA 427

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               + K+ DKG IY+G Y   +S   +   +D EV  
Sbjct: 428 VVEAFVKLHDKGLIYQGSYMVNWSPNLQTAVSDLEVEY 465


>gi|66045985|ref|YP_235826.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|63256692|gb|AAY37788.1| Methionine--tRNA ligase [Pseudomonas syringae pv. syringae B728a]
          Length = 499

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 70/423 (16%), Positives = 135/423 (31%), Gaps = 46/423 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G + +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R  +     +    ++  + D G     D
Sbjct: 63  LGVDPVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALRDAGAIECRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------YYNAQHNPVQW 159
             +           EA+   +  Y GA+                            P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTDLRCKLCSQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L                    +      L D  ++R   D G+ 
Sbjct: 183 KNAHRAFLKLAGFKPQLRDRLLGQSWRKPLDSW----LRDSLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADRVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L + +    ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLTALHDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 +G +            LA           +++    +           +D  +L
Sbjct: 358 IAPEESEGDFRLAQF-------LAWRAEVFSEFFPALLDAGSNRDDHWWSGLCGADAGLL 410

Query: 392 SVC 394
              
Sbjct: 411 EAL 413


>gi|121606119|ref|YP_983448.1| isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595088|gb|ABM38527.1| Isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 944

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 112/296 (37%), Gaps = 18/296 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +       I+ VW D+ T +            ++   WPADL++ G D     FH+    
Sbjct: 546 EHYTKVNDILDVWFDSGTTHDHVLR----HSHAEQSAWPADLYLEGHDQHRGWFHSSLLT 601

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           A  +  + P    +     +  KG K+SKS GNV+ P  V  ++G + +R +       G
Sbjct: 602 ACAMYDHAPYKGLLTHGFTVDGKGRKMSKSEGNVVAPQAVSGKLGAEIIRLWCASTDYSG 661

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVC 394
            D   D   L + V  D    I N + R +   + D+D  +     G   E D   LS  
Sbjct: 662 -DLAIDDKILARVV--DAYRRIRNTL-RFLMANVSDFDPALDAVPFGEMLEIDRYALSRA 717

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYV 450
           +++  +I  + +    H  ++++    SE     Y D  K   L  T P   +  +    
Sbjct: 718 AQLQADILAHYEVYEFHPVVSKLQIYCSEDLGSFYLDILKD-RLYTTGPKSLARRSAQTA 776

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
              +   +   +  F+   A + + I   A E+   ++  +   P   L   +  I
Sbjct: 777 LHAITHAMLRWMAPFLSFTAEEAWKIFG-ASESIFIETYAELPAPDEALLAKWSRI 831



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 12/199 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N Q HIGHA   I+ D++ +  +L GLD ++  G D HG  I  A + 
Sbjct: 53  EKFVLHDGPPYANGQIHIGHAVNKILKDMIVKARQLKGLDAIYVPGWDCHGLPIENAIEK 112

Query: 65  A----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKK 112
                         ++ F  +           L +   +D+  RT +  +        K+
Sbjct: 113 LYGRSLPRDEVQAKSRAFATEQIAGQMADFKRLGVLGEWDNPYRTMDFGNEAQEIRALKR 172

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
           I ++G +Y+G    ++     +   + E+                   E+    F L   
Sbjct: 173 IMERGFVYRGLKPVYWCFDCGSSLAEFEIEYADKKSQTLDVGFKCAEPEKLAAAFGLETL 232

Query: 173 QDKLLSYYESHPEFILPIE 191
                +   +   + +P  
Sbjct: 233 AKDAFAIIWTTTAWTIPAN 251


>gi|306815377|ref|ZP_07449526.1| isoleucyl-tRNA synthetase [Escherichia coli NC101]
 gi|305851039|gb|EFM51494.1| isoleucyl-tRNA synthetase [Escherichia coli NC101]
          Length = 938

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAVKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|224534306|ref|ZP_03674884.1| leucine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514408|gb|EEF84724.1| leucine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 840

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+ AR+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFARYKILNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 57/395 (14%), Positives = 136/395 (34%), Gaps = 93/395 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 +   + F    Y  + +          +P+E+ +  +   ++     SL+ ++ 
Sbjct: 417 KETVTYKLRDWVFSRQRYWGEPIPILFDKLGNTIPLEKNDLPLKLPETANYKPSLTGESP 476

Query: 215 DWGIKIPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHV 262
              IK   +            M  W  +   YL         +  +  K ++W P DL++
Sbjct: 477 LSRIKDWVNVKNTGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYI 536

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE-------- 301
            G +    H +Y   +         ++   P  K      + +  +    G         
Sbjct: 537 GGAEHTVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVV 596

Query: 302 --------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                               K+SKSL NVI+P ++I+E G D++R + +          +
Sbjct: 597 EKDNKFFDKKDGKEVTQVTAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPW 656

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  G+          G+   +++  S+  K+     P         + I+S   +V++++
Sbjct: 657 NTKGII---------GVFRFLNKIWSLREKELSKDNPP--------KEIISQLHKVIKKV 699

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+ +    + A++ ++  ++E+ +Y                        + + +   I+
Sbjct: 700 TEDTEKLNFNTAISAMMIFINELLKY--------------------EKNYLSIFKPFIII 739

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLDQRL 493
           L  + P LA ++++ +       +N  +   D+ L
Sbjct: 740 LSPYAPHLAEELWEYIEETPSLFKNSKWPKFDENL 774


>gi|300741662|ref|ZP_07071683.1| valine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380847|gb|EFJ77409.1| valine--tRNA ligase [Rothia dentocariosa M567]
          Length = 910

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 11/259 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLL 280
           DP  ++  W  +       TG+  +P+   AK +P DL   G DI+R         A  L
Sbjct: 521 DPD-VLDTWATSSLTPQIATGWATDPE-LHAKTFPMDLRPQGHDIIRTWLFSTAVRAETL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           ++++P      S   +    +K+SKS GNV+ P +V+++ G DA+RY+       G D  
Sbjct: 579 ASSVPWYNTALSGWILDPDRKKMSKSKGNVVVPHDVLDKYGSDAVRYW-AASARLGADTA 637

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTES-DESILSVCSRV 397
           YD+  +K  +   LA  + N     +++    K            T + D S+L   + +
Sbjct: 638 YDEGQMK--IGRRLAIKLLNASKFVLNLGATEKSVITSQAQGRVLTNALDRSLLVRLAYL 695

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           ++E     +     RAL    S      D + +  K            ++VL      + 
Sbjct: 696 VEEATAAFEKYEYARALQIAESFFWSFTDDFVELIKDRAYGTRGETEQASVLAALATTLD 755

Query: 457 QLAILLQAFVPKLANKIFD 475
            L  L   F+P +  +I+ 
Sbjct: 756 ALLRLFAPFLPFVTEEIWS 774



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 16/140 (11%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREQVYSIDTPPPTASGSLHVGHMFSYTQTDVIARYQRMSGKNVFYPLGWDDNGLPTER 104

Query: 61  AAQNA---GVTTKVFVDQNSRN------------FRDMADVLDISYDDFIRTTEKRHHDT 105
             QN         V  + + R              R  A    IS ++FI   E+   + 
Sbjct: 105 RVQNYYGVLCDPSVPDNPDFRQLIPLKADGSPKPDRSQAKWPRISRNNFIELCEELAVED 164

Query: 106 CRILWKKISDKGDIYKGCYS 125
            ++     +  G      ++
Sbjct: 165 EKVFEHLFTALGLSVDWSHT 184


>gi|323465976|gb|ADX69663.1| Leucyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 804

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V    N  NF+   + L  SY  D  I T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPAVVTKNNIANFKRQLNKLGFSYDWDREITTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDG----RTERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSVG 226



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 78/464 (16%), Positives = 147/464 (31%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  D+S   F     +            +
Sbjct: 329 YGTGAVMAVPAHDDRDYAFAKKFDLPINQVLEGGDLSKAAF----TEDGPHINSEFLNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + K    K           E   N          Q Y  +  PV   E+           
Sbjct: 385 NIKDAKKKMVDWLEEHNCGEKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGTTSLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                         LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDEMGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      ++    D    K W P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   EK+SKS GNV++P EVI+E G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   IP      ++D  +  V +  +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+      + A++Q++  ++                    +A T+     E +     
Sbjct: 664 VTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR---EYVEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|166154512|ref|YP_001654630.1| valyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|301335772|ref|ZP_07224016.1| valyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|259516800|sp|B0B7L8|SYV_CHLT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165930500|emb|CAP03994.1| valyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
          Length = 939

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/347 (18%), Positives = 103/347 (29%), Gaps = 51/347 (14%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +           +   + +E +           + R    W      DP  ++  W  
Sbjct: 404 WCISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFS 458

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +    LT  G+ D       KF+P  + V G DIL F    +      +    P    VF
Sbjct: 459 SGLWPLTCFGWPDEDSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VF 517

Query: 292 SH-----------------------------------GFILHKGEKISKSLGNVIDPIEV 316
            H                                     ++ K EK+SKS GNVIDPIE+
Sbjct: 518 LHGLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEM 577

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG- 375
           IE  G DA+R  L      G+    D    ++  N    N + N        I +     
Sbjct: 578 IEAYGADAVRLTLCSCANRGEQIDLDYRLFEEYKN--FINKLWNGARFIFGHISELTSRD 635

Query: 376 --MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                        D  IL   + +L  I  +       +  +             Y +  
Sbjct: 636 LEEGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEII 695

Query: 432 KPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           KP    K   D+       +   ++  +  +L   VP +   +F  L
Sbjct: 696 KPTLFGKQGSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKRRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|307609730|emb|CBW99241.1| isoleucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 931

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 122/356 (34%), Gaps = 19/356 (5%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           + V      +  N   N   W       +          +  E HP+ +  IER   +I 
Sbjct: 441 NWVPDWGKARISNMVENRPDWCISRQRSWGTPMPLFVHKTTRELHPDTLELIERVAMMIE 500

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                      S +      K  D     M VW+D+  ++ +          +    +PA
Sbjct: 501 KSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSVLK------HNNDLDFPA 554

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D++  G D     F++    A  +    P    +     +  +G+K+SKS GN +   ++
Sbjct: 555 DVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKL 614

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + + G D LR ++       +     ++ +K+  NAD    I N   R +   L D++  
Sbjct: 615 VNQHGADILRLWVASTDYRHE-VSISEEIIKR--NADAYRRIRNTA-RFLLANLFDFNPA 670

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
                     E D   L  C  + +EI    +N   H    ++ +   V     Y D  K
Sbjct: 671 SDCIEAKELLELDRWALKRCQLLQEEIITAYENYHFHLIYQKIHNFCAVDMGSFYLDLIK 730

Query: 433 PWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +    K +  R  +       +++   I L   +   A +I+  +   +    F
Sbjct: 731 DRQYTTAKDSIAR-RSCQTAMYHMVKAFTIWLAPILSFTAEEIWQTIPGNNSESIF 785



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 74/246 (30%), Gaps = 34/246 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 49  KRFILHDGPPYANGHLHCGHALNKILKDIIIKSKTFSGFDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                   ++ + F  +           +DI  D+F R                +   GD
Sbjct: 109 KVGKAGSKISPREFRAKCREYAASQ---IDIQRDEFQR----------------LGVLGD 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKL 176
            Y    +  Y            +       +      PV W  + G     +   Y+DK 
Sbjct: 150 WYNPYVTMDYHYEANIV---RALGLMIKNGHLQQGFKPVHWCIDCGSALAEAEVDYEDKT 206

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
               +     + P E  N   +        L   + +  T      +   P+ I Y  ID
Sbjct: 207 SPSIDVAFSAVNPSEFLNCFETQPAVKPLILPIWTTTPWTLPANEAVCLHPE-IDYALID 265

Query: 234 ALTNYL 239
           A  +Y 
Sbjct: 266 AGNSYY 271


>gi|296106520|ref|YP_003618220.1| isoleucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648421|gb|ADG24268.1| isoleucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 931

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 122/356 (34%), Gaps = 19/356 (5%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           + V      +  N   N   W       +          +  E HP+ +  IER   +I 
Sbjct: 441 NWVPDWGKARISNMVENRPDWCISRQRSWGTPMPLFVHKTTRELHPDTLELIERVAMMIE 500

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                      S +      K  D     M VW+D+  ++ +          +    +PA
Sbjct: 501 KSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSVLK------HNNDLDFPA 554

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D++  G D     F++    A  +    P    +     +  +G+K+SKS GN +   ++
Sbjct: 555 DVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKL 614

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + + G D LR ++       +     ++ +K+  NAD    I N   R +   L D++  
Sbjct: 615 VNQHGADILRLWVASTDYRHE-VSISEEIIKR--NADAYRRIRNTA-RFLLANLFDFNPA 670

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
                     E D   L  C  + +EI    +N   H    ++ +   V     Y D  K
Sbjct: 671 SDCIEAKELLELDRWALKRCQLLQEEIITAYENYHFHLIYQKIHNFCAVDMGSFYLDLIK 730

Query: 433 PWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +    K +  R  +       +++   I L   +   A +I+  +   +    F
Sbjct: 731 DRQYTTAKDSIAR-RSCQTAMYHMVKAFTIWLAPILSFTAEEIWQTIPGNNSESIF 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 74/246 (30%), Gaps = 34/246 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 49  KRFILHDGPPYANGHLHCGHALNKILKDIIIKSKTFSGFDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                   ++ + F  +           +DI  D+F R                +   GD
Sbjct: 109 KVGKAGSKISPREFRAKCREYAASQ---IDIQRDEFQR----------------LGVLGD 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKL 176
            Y    +  Y            +       +      PV W  + G     +   Y+DK 
Sbjct: 150 WYNPYVTMDYHYEANIV---RALGLMIKNGHLQQGFKPVHWCIDCGSALAEAEVDYEDKT 206

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
               +     + P E  N   +        L   + +  T      +   P+ I Y  ID
Sbjct: 207 SPSIDVAFSAVNPSEFLNCFETQPAVKPLILPIWTTTPWTLPANEAVCLHPE-IDYALID 265

Query: 234 ALTNYL 239
           A  +Y 
Sbjct: 266 AGNSYY 271


>gi|194578813|ref|NP_001124133.1| valyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|190337268|gb|AAI63242.1| Si:ch211-152p11.2 protein [Danio rerio]
          Length = 1057

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 74/406 (18%), Positives = 131/406 (32%), Gaps = 66/406 (16%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + + +    E+ K A           +     + +   LS   D  +S        I   
Sbjct: 463 KKQWFVRCQEMAKKAVQAVEEGDLQIIPQFYSKMWKSWLSNISDWCVSRQLWWGHQIPAY 522

Query: 191 ERRNEVISFVKSGLKDLSLS------RKTFDWG-----IKIPDDPQYIMYVWIDALTNYL 239
               +     +        S      R T  +G     I +  DP  ++  W  +     
Sbjct: 523 RVTLQNSMNTEEEHWVWGRSAAEAQQRATIKFGVNPEAITLTQDPD-VLDTWFSSGLFPF 581

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G+         +F+P  +   G D++ F    +      L+  LP  + +F      
Sbjct: 582 AMLGWPQQTK-DLTQFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFKQVLFHSLVRD 640

Query: 298 HKGEKISKSLGNVIDPIEVI-------------------------------------EEV 320
             G K+SKSLGNVIDP++VI                                      E 
Sbjct: 641 KYGRKMSKSLGNVIDPLDVISGVSLERLQEKVKEGNLDPRESIVAIEAQKKDFPKGIPEC 700

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    A G+D       +         N +   V  +++ +    D  +PTP
Sbjct: 701 GTDALRFALCSYRAQGEDISLSMSHVLS--CRHFCNKMWQTVRFTLATLN---DASLPTP 755

Query: 381 GA----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW 434
            A     +  D+ I S     ++E  +  ++  ++   + + S       D Y ++ KP 
Sbjct: 756 LAETYPLSSMDKWICSRLYSTVKECEQGFESYELYTVTSALHSFWLHCLCDVYLESIKPL 815

Query: 435 ELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   +R         V    +     LL  F+P L  +++  L
Sbjct: 816 LKPEGCEERVGERQVATSVLYHSVSVSLALLSPFMPFLTEELWQRL 861



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           +   +           H+GHA  + I D LAR+ R+ G  VL+  G D  G         
Sbjct: 124 KHFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCDHAGIATQSVVER 183

Query: 60  ----------KAAQNAGVTTKVFVDQNSR--NFRDMADVLDISYDDFIR---TTEKRHHD 104
                     +         +V++ +N +          L  S D + R   T +     
Sbjct: 184 KLLREQGKSRQDFSREEFLKQVWMWKNEKGDEIYHQLRKLGASLD-WSRACFTMDPAFSS 242

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + ++ D G IY+      +S   E+  +D EV
Sbjct: 243 AVTEAFVRLCDSGLIYRAEGLINWSCTLESAISDIEV 279


>gi|170289257|ref|YP_001739495.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176760|gb|ACB09812.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 920

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 75/518 (14%), Positives = 156/518 (30%), Gaps = 71/518 (13%)

Query: 15  YPN-----AQPHI--GHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y +        HI  GH  E  I   V           +   +  DE G+   +A +  G
Sbjct: 310 YVSLETGTGCVHIAPGHGEEDYIYGHVQ--------YGLPIVSPVDEEGRFTEEAGKYKG 361

Query: 67  VTTKVFVDQNSRNFRDMADVLDI---------SYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +    F++  +    +      I         SY    R             +  +    
Sbjct: 362 M----FIEDANEVIIEDLKKKGILVHASSITHSYPHCWRCKGPVIFRATEQWFISVDHNN 417

Query: 118 DIYKG-------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
              K         +   +         ++        Q       P    +E G      
Sbjct: 418 LRQKVLEEIDKVKWIPEWGRNRIRSMVEERPDWCISRQRVWGTPIPAVKCKECGEVVLDP 477

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
              +  +   E         +   E+I                   G +  +     + V
Sbjct: 478 KVIEHFMKIVEKEGTNAWFEKEVEELI----------PEDFVCPKCGKRSFEKMLDTLDV 527

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           WID+  +      +       +   +P D+++ G D     FH+  + A     + P  +
Sbjct: 528 WIDSGAS------FEYITTKREDHPFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKE 581

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGNV+DP+EV+E+ G + LR +L        D       +++
Sbjct: 582 VLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYF-NDIKISMRIVEQ 640

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRE 403
           +        +   +  +   +L + +G  P             D   L     +++   E
Sbjct: 641 QTE------VYRKIRNTFRFLLGNLEGFDPELDRVPYEKLLTIDRWALGRLQEIIKRATE 694

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAI 460
              +    +    V+          Y D  K    ++  +     +   V  E++  L  
Sbjct: 695 YYDSYEFSKVYNLVVKYCTTELSSLYLDVVKDRLYVEAKDSIYRRSAQTVMHEILIALMK 754

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           +L   +     +++  L   +++R ++++     P + 
Sbjct: 755 ILAPIMTFTMEEVYSHLH--EKDRKYKTVQAEYWPEYK 790



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIG A   I+ D++ ++  + G    +  G D HG  I   
Sbjct: 46  KGKPLFVLHDGPPYANGHIHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHR 105

Query: 62  AQNA------GVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                      ++        + F  +     R+    L +  D      T +  +    
Sbjct: 106 VSQELGEKIKEMSPAEIRKKCEEFALRFVDIQREEFKRLGVRGDWENPYITLKPDYEVKI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++K + ++G++Y+     ++  R      + E+   
Sbjct: 166 LDVFKTLVEEGNVYRSLKPIYWCPRCRTALAEAEIEYH 203


>gi|117619483|ref|YP_855224.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166228633|sp|A0KG39|SYI_AERHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117560890|gb|ABK37838.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 953

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 67/420 (15%), Positives = 128/420 (30%), Gaps = 52/420 (12%)

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             V + SY    R             +  +  KG               E    D     
Sbjct: 401 HKVFNHSYPHCWRHKTPIIFRATPQWFISMEQKGLR------QRALEEIERIEQDGIKQH 454

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           G  G       N +Q M E    + +S  +              L + +  + +      
Sbjct: 455 GQSGWVPAWGKNRIQAMVENRPDWCISRQRTW-------GVPISLFVHKETQELHPESVR 507

Query: 204 LKDLSLSRKTFDWGIKIPDDPQY----------------IMYVWIDALTNYLTTTGYLDN 247
           L      R     GI+   D                    + VW D+ + + +       
Sbjct: 508 LMHEVAKRVE-QSGIQAWWDLDKAELLGSDADLYDKVPDTLDVWFDSGSTHSSVVDARPE 566

Query: 248 PDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISK 305
            +G+     PAD+++ G D     F +       +    P  + +     +  +G K+SK
Sbjct: 567 FNGN-----PADMYLEGSDQHRGWFMSSLMIGVAMKDKAPYNQVLTHGFTVDGQGRKMSK 621

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S+GNV+ P +V+ ++G D LR ++      G+      + LK+  +A         +  +
Sbjct: 622 SIGNVVSPQDVMNKLGADILRLWVASTDYTGEMTV-SDEILKRSADA------YRRIRNT 674

Query: 366 VSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              +L + +G  P      P      D   +     V  EI         H    +++  
Sbjct: 675 ARFLLANLNGFNPATDMVAPADMVVVDRWAVGRAKAVQAEIMAAFDEYNFHGVTQKLMQF 734

Query: 421 VSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            S      Y D  K  +   K +     +       +   +   +   +   A++I+ +L
Sbjct: 735 CSIEMGSFYLDVIKDRQYTAKADSLARRSCQTALYHIAEAMVRWMAPIMSFTADEIWALL 794



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 46/156 (29%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GKPSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGFDSPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL------- 109
           +              F  +  +  +   +     +       +  H              
Sbjct: 107 EGMVGKPGEKVSAAEFRAECRKYAKTQIEAQKTDFIRLGVLGDWEHPYLTMDFGTEANII 166

Query: 110 --WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               KI + G ++KG     +     +   + EV  
Sbjct: 167 RSMAKIVENGHLHKGSKPVHWCTDCGSALAEAEVEY 202


>gi|78189645|ref|YP_379983.1| leucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729832|sp|Q3APY5|SYL_CHLCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78171844|gb|ABB28940.1| leucyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 805

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 11/218 (5%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH      +D++AR+ R  G +VL   G D  G    + 
Sbjct: 29  SKPKYYVLDMFPYPSGSGLHVGHLEGYTASDIIARYKRSSGYNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N +NF+     +  SYD    I TT+  +    + ++ ++ D+G  
Sbjct: 89  AIKTGTHPRITTEANVKNFKGTLQAMGFSYDWEREINTTDSGYFKWTQWIFLQLYDRGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +    ++EV +     Y       V       +  +++AY ++LL+ 
Sbjct: 149 YMSEVDVNWCEELKTVLANEEVDEKLADGYT------VVRRPLRQWVLKITAYAERLLAD 202

Query: 180 YE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            E    PE +  ++R     S       +L   R T  
Sbjct: 203 LEELDWPENVKQMQRNWIGRSEGVEIDFELRCHRTTLK 240



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 99/270 (36%), Gaps = 42/270 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      ++      +  ++W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPHNHAQVVDGNNERYWMNVDLYIGGAEHAVLHLLYSRFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  K       +    EK+SKS GNVI    V++  G DA+R + + 
Sbjct: 546 KVLYDLGVVSTKEPFQKLFNQGMILGEDNEKMSKSRGNVIPADHVLQRYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++ +G++         GI   + +    +  ++      P      DE +L
Sbjct: 606 LGPLEQVKPWNTNGIE---------GISRFLGKVWRFVYPEHSEAATQPSNEPLPDE-LL 655

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ ++  +   + A+A+++  V+E+ +                         
Sbjct: 656 RRMHKTIKKVGDDTSSLKFNTAIAEMMVFVNELTK--------------------TGCNN 695

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            E I  L  LL  + P +  ++++ L   +
Sbjct: 696 REAIETLLKLLAPYAPHMTEELWEALGHTN 725


>gi|21242008|ref|NP_641590.1| isoleucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|81804098|sp|Q8PN19|SYI_XANAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21107406|gb|AAM36126.1| isoleucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 943

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDEMVLLDRWIVHRAHELQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 777 RWIAPVLSFTAEELWGYLPGKHVDNVLFATWYDGLAP 813



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAEFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|67481173|ref|XP_655936.1| isoleucyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56473103|gb|EAL50549.1| isoleucyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 1056

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/417 (15%), Positives = 140/417 (33%), Gaps = 67/417 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +      P+ +     +F  + +++DKL+    S   + +P   R           
Sbjct: 394 HSYPFCWRSDTPLIYRAIPSWFVNVESFKDKLVES--SQQTYWVPENIREGRFENWLRNA 451

Query: 205 KDLSLSRKTFDWG--IKIPDDPQY------------------------------------ 226
           +D ++SR  F WG  I I  D  Y                                    
Sbjct: 452 RDWAISRNRF-WGTPIPIWTDDDYTEFVCVGSVKELEELTGKKVTDLHRESVDNLIIEKN 510

Query: 227 ---------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    +   W ++ +     + Y         + +P D    G D     F+++  
Sbjct: 511 GKKLHRISEVFDCWFESGSMPYGQSHYPFENVEQFKENFPGDFIAEGIDQTRGWFYSLIV 570

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L    P    V +   +   G+K+SK L N  DP+++I   G DALR  L+   A 
Sbjct: 571 ISTALFGKAPFKNCVVNGLVLASDGKKMSKRLKNYPDPMDMINLYGADALRLSLINSPAV 630

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDESI 390
             +        +++   +L + I      ++  + + +   +            + D  I
Sbjct: 631 RAETV----KFQEKTLKELISTIFLPWFNTLRYLKQSFKPEMKIMAIDKIANMNDMDRWI 686

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +++++RE M+   ++  +  ++  LV+  + Y    +             T   
Sbjct: 687 LSSLMSLVKKVREEMKMFRLYTIITPLVDLLVTLSNWYIRLNRKRFRGGYGEAAQETSCS 746

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    ++ ++IL+  F P  +   +  L     N      +++++      +  +P+
Sbjct: 747 VLYHCLKIMSILMAPFTPFFSEFCYQKLKAFPLNY-----EEKMEESVHFVQIPEPL 798



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 25/256 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R +        +    PH GH     I D + R+    G  V    G D HG  I   
Sbjct: 36  KDRPRFSFYDGPPFATGLPHYGHLLAGTIKDTVCRYAIQTGHRVDRKFGWDTHGLPIEFE 95

Query: 62  AQNA--GVTTKV---------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                   TT+                 V + S  ++ +       I  D   +T +   
Sbjct: 96  IDKLLGIHTTEEVLKLGIPKYNQECRNIVMRYSEEWKKVVWRCGRWIDMDHPYKTMDIDF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ +K  +Y+G     +S       ++ E           A         E
Sbjct: 156 MESVWWVFKQLYEKNLVYRGLKIMPFSTGCCTPLSNFEAGMAYRDVPDPAVTMTFPVNGE 215

Query: 163 EGYFF------RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           E  +F        +   +  L    +        E        ++  +  L  ++K    
Sbjct: 216 ENTYFLAWTTTPWTLPSNLALCVNPNMDYVKFYDETTKHNYYMMECLMPTLPNAKKAKRT 275

Query: 217 GIKIPDDPQYIMYVWI 232
            I+       +   ++
Sbjct: 276 IIEKMKGKDLVGKTYV 291


>gi|150402643|ref|YP_001329937.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150033673|gb|ABR65786.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 1034

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 67/351 (19%), Positives = 125/351 (35%), Gaps = 20/351 (5%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +   L  +  +    YE         ER NE  +         +     T   G K+   
Sbjct: 467 WGIPLPIWICEECGNYEVIGSVDELTERANEKDLDLSDIHKPAVDKITLTCSCGGKMKRT 526

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           P  ++ VW D+      + G              A     G D +   F++ +  + ++ 
Sbjct: 527 PD-VLDVWYDSGLAPYASIGSKTLKK--------AKFITEGNDQVTKWFYSQHALSAVVF 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +    K +     +   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +
Sbjct: 578 DDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRF 637

Query: 342 DKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
               + +     + N + N  + S   M+L D+           + D  ILS  + V +E
Sbjct: 638 SYSEMDE--TRSMLNTLWNSYAFSANYMVLDDFIPNDEYFKHVKDEDAWILSRINTVAKE 695

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             E ++   +H     +   V       Y    +     + N  +  +       VI +L
Sbjct: 696 AVEALEKPHLHTYTWTLRDFVLNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKL 755

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF---MLHKTFDPI 506
             ++    P ++ +I+  L   D           ++ GF    L K  + I
Sbjct: 756 ISIMAPVTPHISEEIYQNLKTEDMLESIFMNKLTIESGFINETLEKDTEII 806



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 20/157 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 37  PEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F   N    +   + L I   +++     ++ + +
Sbjct: 97  EFNIGSKKDIETKIGTLGFINKCKEFALNNLEFMQGQFENLGIWLDFENAYMPIKRDYME 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 KK  +K  + K   SG++  R E    + EV
Sbjct: 157 MGWWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHEV 193


>gi|114606513|ref|XP_001159912.1| PREDICTED: valyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 1254

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 122/414 (29%), Gaps = 92/414 (22%)

Query: 150  YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             N   + V+ +    ++ R         +        ILP              +++  +
Sbjct: 658  CNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEA-HQRTWHAWMDNIREWCI 716

Query: 210  SRKTFDWGIKIPD---------DPQY---------------------------------- 226
            SR+   WG +IP          DP                                    
Sbjct: 717  SRQ-LWWGHRIPAYFVTVSDPADPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDED 775

Query: 227  IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
            ++  W  +    L+  G+ +  +   + F+P  L   G DIL F    +      L+  L
Sbjct: 776  VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRL 834

Query: 285  PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE-------------------------- 318
            P  +           G K+SKSLGNVIDP++VI                           
Sbjct: 835  PFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHDQLLNSNLDPSEVEKAKE 894

Query: 319  -----------EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
                       E G DALR+ L    + G+D   D + +         N + N    ++ 
Sbjct: 895  GQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILG--YRHFCNKLWNATKFALR 952

Query: 368  MILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
             + K +         G  +  D  I S  +  ++   +  Q            S      
Sbjct: 953  GLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYEL 1012

Query: 424  VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             D Y +  KP  L   +   A          +     LL  F+P +  ++F  L
Sbjct: 1013 CDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRL 1065



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 332 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 391

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 392 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 451

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 452 EAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 485


>gi|313632514|gb|EFR99522.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
          Length = 921

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 108/282 (38%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGESPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFEPTTNGVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSKDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYESVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDLPE 784



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  DRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|166155387|ref|YP_001653642.1| valyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|259516944|sp|B0BBT3|SYV_CHLTB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|165931375|emb|CAP06948.1| valyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 939

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/347 (18%), Positives = 103/347 (29%), Gaps = 51/347 (14%)

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
             +           +   + +E +           + R    W      DP  ++  W  
Sbjct: 404 WCISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFS 458

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +    LT  G+ D       KF+P  + V G DIL F    +      +    P    VF
Sbjct: 459 SGLWPLTCFGWPDEDSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VF 517

Query: 292 SH-----------------------------------GFILHKGEKISKSLGNVIDPIEV 316
            H                                     ++ K EK+SKS GNVIDPIE+
Sbjct: 518 LHGLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEM 577

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG- 375
           IE  G DA+R  L      G+    D    ++  N    N + N        I +     
Sbjct: 578 IEAYGADAVRLTLCSCANRGEQIDLDYRLFEEYKN--FINKLWNGARFIFGHISELTSRD 635

Query: 376 --MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                        D  IL   + +L  I  +       +  +             Y +  
Sbjct: 636 LEEGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEII 695

Query: 432 KPWELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
           KP    K   D+       +   ++  +  +L   VP +   +F  L
Sbjct: 696 KPTLFGKQGSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKRRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|148543832|ref|YP_001271202.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|148530866|gb|ABQ82865.1| Isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 960

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 23/279 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 548 FTKETDIMDVWFDSGSSHQGVLAER------DYLTYPADLYLEGSDQYRGWFNSSLITSV 601

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + S + P  + V     +  +G K+SKS GNVIDP +V++++G + +R +++       D
Sbjct: 602 VCSGHAPYKEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVMSADTSA-D 660

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                   ++   A         +  +   +L +     P             D+ +L  
Sbjct: 661 VRVSMGTFQQISEA------YRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVK 714

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +  L+ +RE+  N     A   +I+ V       Y +  K    ++  N +   ++  V
Sbjct: 715 LNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTV 774

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +++  L  LL   +P    +++  +   ++      +
Sbjct: 775 FYDILLTLVKLLTPILPHTTEEVWSYMNEPEDFVQLTEI 813



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 74  EGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQ 133

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +G   K             +  +     R     L +S  +D    T +K       
Sbjct: 134 LTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQI 193

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ + + KG +Y+     ++S   E+   + EV   
Sbjct: 194 RVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 230


>gi|327302670|ref|XP_003236027.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326461369|gb|EGD86822.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 1078

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 98/264 (37%), Gaps = 11/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 519 EEVFDCWFESGSMPYASQHYPFKDKERFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGLVMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFT---ESDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D M       T     D  IL+ C
Sbjct: 639 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENVDYMFDPKAESTNTNAMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  L   L  F P + + I+  L
Sbjct: 759 VLYTLVRGLAPFTPFITDTIYLRL 782



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      K  V + S  +R   D L   I +D+  +T +   
Sbjct: 90  IDKMLGMSGSEAVEKIGLKAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKTMDTTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESIWWILKQLFDKGAVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|317407733|gb|EFV87662.1| IleS protein [Achromobacter xylosoxidans C54]
          Length = 953

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 14/260 (5%)

Query: 228 MYVWIDALTNYLTT---TGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + VW D+ + + T                  WPADL++ G D     FH+      +L  
Sbjct: 544 LDVWFDSGSTHATVLGGKDGDFAGSHGAELGWPADLYLEGSDQHRGWFHSSLLTGCMLYG 603

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  +G K+SKS+GNVI P +V + +G + LR ++      G+     
Sbjct: 604 QPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGE-LSIS 662

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
            + LK+ V  +    I N + R +   L D+D +  +   G   E D   L++ +++  E
Sbjct: 663 DEILKRVV--EGYRRIRNTL-RFLLANLADFDAVSQSVPYGELFEIDRYALAMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           ++ + +    H A++++ +  SE     Y D  K      K +     +     +++ + 
Sbjct: 720 VQGHYERYDFHPAVSRLQTFCSEDLGAFYLDILKDRLYTSKVDSAARRSAQTALLDITQT 779

Query: 458 LAILLQAFVPKLANKIFDIL 477
           L  L+   +   A + +  L
Sbjct: 780 LLKLMAPILSFTAEEAWKEL 799



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     R     L +   +D    T    +       
Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLGVLGEWDRPYMTMNFSNEADEIRA 164

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              I DKG +++G     +     +   + EV  
Sbjct: 165 LGHILDKGYVFRGLKPVNWCFDCGSALAEAEVEY 198


>gi|145630058|ref|ZP_01785840.1| beta-hexosaminidase [Haemophilus influenzae R3021]
 gi|144984339|gb|EDJ91762.1| beta-hexosaminidase [Haemophilus influenzae R3021]
          Length = 941

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 70/436 (16%), Positives = 144/436 (33%), Gaps = 55/436 (12%)

Query: 93  DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYNDDEVY 142
            FI TTE          +       +++ +   + K  +S  +  R +    +    + +
Sbjct: 364 KFISTTEFFAGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPHCWRHKTPIIFRATPQWF 423

Query: 143 KGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEV 196
            G + Q    Q       V+W+ + G        +++          + +P+      E 
Sbjct: 424 IGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPMTLFVHKET 483

Query: 197 ISFVKSGLKDLSLSRKTFDW-GIKIPDDPQY----------------IMYVWIDALTNYL 239
                  L+ L    K  +  GI+   D                    + VW D+ + Y 
Sbjct: 484 EELHPRTLELLEEVAKRVEKAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDSGSTYS 543

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFIL 297
           +        +G        D+++ G D     F +    +    +  P  + +     + 
Sbjct: 544 SVVANRPEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVD 598

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
            +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  + KR     A  
Sbjct: 599 GQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE--ILKR-----AAD 651

Query: 358 IGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
               +  +   +L + +G  P      P      D   ++       EI++   N   H 
Sbjct: 652 SYRRIRNTARFLLANLNGFDPKRDLIKPEEMISLDRWAVACALDAQHEIKDAYDNYQFHT 711

Query: 413 ALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            + +++   S      Y D  K  +   K N     +       +   L   +   +   
Sbjct: 712 VVQRLMRFCSVEMGSFYLDIIKDRQYTTKANSLARRSCQTALWHIAEALVRWMAPILSFT 771

Query: 470 ANKIFDILFVADENRC 485
            ++I+  L   +  R 
Sbjct: 772 TDEIWQHLPQTESARA 787



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGY 165
                K+ + G +YKG     + L   +   + EV              P V  +E E  
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAVSAVEIEEK 226

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FNAVGKGHGKLSAVIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 69/460 (15%), Positives = 143/460 (31%), Gaps = 42/460 (9%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAG---VTTKVFVDQNSRNFRDMADVLDI--SY 91
           FH      +      D+ G   ++A    G         + +       +  +  I  SY
Sbjct: 333 FHVGMKYGLDVLCPVDDKGNMTSEAPGFEGLFYDAANKPITEKLEEAGALLKLTFITHSY 392

Query: 92  DDFIRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
               RT +          +   K   ++        + + +  +   +N           
Sbjct: 393 PHDWRTKKPVIFRATAQWFASIKDFRNELLEAVKETNWYPAWGETRLFNMVRDRGDWCIS 452

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                  P+         F     ++ +      H   +      N         L    
Sbjct: 453 RQRVWGVPI-------PVFYAENGEEIITDETIEHVSNLFREHGSNIWFEREAKELLPEG 505

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            +      G         IM VW D+ +++                  PADL++ G D  
Sbjct: 506 FTHPGSPNG--QFTKETDIMDVWFDSGSSHQAVLLER------DDLQRPADLYLEGSDQY 557

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V+ ++G D LR
Sbjct: 558 RGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDGEGRKMSKSIGNVVVPAKVMNQLGADILR 617

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA---- 382
            ++        D       LK+         +   +  +   +L + D   P   +    
Sbjct: 618 LWVASVDYQA-DVRVSDAILKQ------VAEVYRKIRNTFRFLLGNLDDFNPATDSVSFE 670

Query: 383 -FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELK 437
              E D+ +L   +++++ +RE+            V +         Y D  K   +   
Sbjct: 671 NLREVDQFMLVKLNKLIKNVRESYDRYEFASIYHAVNNFCTLDLSAFYLDFAKDVLYIEA 730

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K N +R   +  V  E +  L  L+   +   +++++  +
Sbjct: 731 KDNAER-RAIQTVLYESLIALTKLVAPILSHTSDEVWSFI 769



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   HIGHA   I+ D + R   + G +  +  G D HG  I +A
Sbjct: 45  KGRPMFVLHDGPPYANGDIHIGHALNKILKDFIVRSKSMTGYNAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
             N GV  K             +  +   + R     L +  D      T +  +     
Sbjct: 105 LTNKGVKRKEMSIAEFRKLCEEYAYEQIDSQRGQFKRLGVRGDWENPYITLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 KVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|302663769|ref|XP_003023522.1| hypothetical protein TRV_02269 [Trichophyton verrucosum HKI 0517]
 gi|291187525|gb|EFE42904.1| hypothetical protein TRV_02269 [Trichophyton verrucosum HKI 0517]
          Length = 1085

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 103/277 (37%), Gaps = 13/277 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 526 EEVFDCWFESGSMPYASQHYPFKDKERFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 585

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V++  G D LR +L+       +   +
Sbjct: 586 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGLVMDRYGSDPLRLYLINSPVVRAEPLRF 645

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D M       T     D  IL+ C
Sbjct: 646 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENVDYMFDPKAESTNTNVMDRWILASC 705

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 706 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 765

Query: 454 VIRQLAILLQAFVPKLANKIFDIL--FVADENRCFQS 488
           V+  L   L  F P + + I+  L   + ++ R   S
Sbjct: 766 VLYTLVRGLAPFTPFITDTIYLRLLPHIPEKLRGEDS 802



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 58/171 (33%), Gaps = 26/171 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDD-------FI 95
                             +      K  V + S  +R   D L   I +D+       F 
Sbjct: 90  IDKMLGMSGSEAVEKIGLEAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKVGALFP 149

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            T +    ++   + K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 WTMDTTFMESIWWILKQLFDKGVVYRGYRVMPYSTALNTPLSNFEAQQNYK 200


>gi|281412859|ref|YP_003346938.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373962|gb|ADA67524.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 919

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 75/518 (14%), Positives = 156/518 (30%), Gaps = 71/518 (13%)

Query: 15  YPN-----AQPHI--GHAYE-MIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           Y +        HI  GH  E  I   V           +   +  DE G+   +A +  G
Sbjct: 309 YVSLETGTGCVHIAPGHGEEDYIYGHVQ--------YGLPIVSPVDEEGRFTEEAGKYKG 360

Query: 67  VTTKVFVDQNSRNFRDMADVLDI---------SYDDFIRTTEKRHHDTCRILWKKISDKG 117
           +    F++  +    +      I         SY    R             +  +    
Sbjct: 361 M----FIEDANEVIIEDLKKKGILVHASSITHSYPHCWRCKGPVIFRATEQWFISVDHNN 416

Query: 118 DIYKG-------CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
              K         +   +         ++        Q       P    +E G      
Sbjct: 417 LRQKVLEEIDKVKWIPEWGRNRIRSMVEERPDWCISRQRVWGTPIPAVKCKECGEVVLDP 476

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
              +  +   E         +   E+I                   G +  +     + V
Sbjct: 477 KVIEHFMKIVEKEGTNAWFEKEVEELI----------PEDFVCPKCGKRSFEKMLDTLDV 526

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           WID+  +      +       +   +P D+++ G D     FH+  + A     + P  +
Sbjct: 527 WIDSGAS------FEYITTKREDHPFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKE 580

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +        +G K+SKSLGNV+DP+EV+E+ G + LR +L        D       +++
Sbjct: 581 VLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYF-NDIKISMRIVEQ 639

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQEIRE 403
           +        +   +  +   +L + +G  P             D   L     +++   E
Sbjct: 640 QTE------VYRKIRNTFRFLLGNLEGFDPELDRVPYEKLLTIDRWALGRLQEIIKRATE 693

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAI 460
              +    +    V+          Y D  K    ++  +     +   V  E++  L  
Sbjct: 694 YYDSYEFSKVYNLVVKYCTTELSSLYLDVVKDRLYVEAKDSIYRRSAQTVMHEILIALMK 753

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           +L   +     +++  L   +++R ++++     P + 
Sbjct: 754 ILAPIMTFTMEEVYSHLH--EKDRKYKTVQAEYWPEYK 789



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIG A   I+ D++ ++  + G    +  G D HG  I   
Sbjct: 45  KGKPLFVLHDGPPYANGHIHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHR 104

Query: 62  AQNA------GVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                      ++        + F  +     R+    L +  D      T +  +    
Sbjct: 105 VSQELDEKIKEMSPAEIRKKCEEFALRFVDIQREEFKRLGVRGDWENPYITLKPDYEVKI 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++K + ++G++Y+     ++  R      + E+   
Sbjct: 165 LDVFKTLVEEGNVYRSLKPIYWCPRCRTALAEAEIEYH 202


>gi|324008367|gb|EGB77586.1| isoleucine--tRNA ligase [Escherichia coli MS 57-2]
          Length = 938

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAVKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKTK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|219684545|ref|ZP_03539488.1| leucyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671907|gb|EED28961.1| leucyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 840

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  DG       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 134/390 (34%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E+ +  +   ++     S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEKNDLPLKLPETANYKPSRTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL      +  +     K ++W P DL++ G + 
Sbjct: 482 DWANLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE------------- 301
              H +Y   +         ++   P  K      + +  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKDNK 601

Query: 302 ---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKRDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   + ++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISQLHKAIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  V+E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFVNELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGETPSLFKNSKWPKFDENL 774


>gi|193215143|ref|YP_001996342.1| leucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|229559917|sp|B3QRU2|SYL_CHLT3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193088620|gb|ACF13895.1| leucyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 805

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 9/198 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH      +D+ AR+ RL G  VL   G D  G    + 
Sbjct: 29  NKPKYYVLDMFPYPSGSGLHVGHLEGYTASDITARYKRLKGFSVLHPMGWDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  + N  NF+     +  SYD    I TT+  +    + ++ K+ +KG  
Sbjct: 89  AIKTGTHPRLTTETNVANFKSTLQRMGFSYDWSREINTTDPGYVKWTQWIFLKLYEKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +    +    ++EV +  +  Y       V       +  +++AY ++LL+ 
Sbjct: 149 YVDDVPVNWCEELKVVLANEEVDEKVNDGYT------VVRRPLRQWMLKITAYAERLLTD 202

Query: 180 YESHPEFILPIERRNEVI 197
            +         E +   I
Sbjct: 203 LDEVDWPESVKEMQRNWI 220



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 43/280 (15%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +  +     K K+W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPDNPNEAVSPEKEKYWMNVDLYIGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  K       +    EK+SKS GNVI    V+   G DA+R + + 
Sbjct: 546 KVLYDVGVVSTKEPFRKLFNQGMILGEDNEKMSKSRGNVITADSVMSGYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   +  +G++         GI   + +   ++  +             S E++L
Sbjct: 606 LGPLEQVKPWSTNGIE---------GISRFLGKVWRLVYPNEADGTVQVTDDAPS-ETVL 655

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ +    + A+++++  V+E+                 ++  +     
Sbjct: 656 RRMHKTIKKVGEDTETLKFNTAISEMMIYVNEL---------------QKEKCRS----- 695

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
              I  L ++L  F P +  +++  L   +E+  F    +
Sbjct: 696 RTAIENLLLMLSPFAPHICEELWQALG-HEESITFAKFPE 734


>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554705|sp|Q31CU4|SYI_PROM9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 968

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 148/436 (33%), Gaps = 52/436 (11%)

Query: 111 KKISDKGDIYKGCYSGWYSLRD-EAYYNDDEVYKGADGQYYNAQHNP--VQWMEEEGYFF 167
           K +    + YK  Y   +  +    +   ++ +   +G   +A      V+W+   G   
Sbjct: 411 KDLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALKAIEDVEWIPATGKKR 470

Query: 168 RLSAYQDKLLSYYESHPEFILPIERR----------NEVISFVKSGLKDLSLSRKTFDWG 217
             S    +          + LPI             N  I      L     +   +DW 
Sbjct: 471 IYSMVVGRGDWCISRQRSWGLPIPVFYKKNGNEILLNSEIINHIQKLFSEHGADIWWDWD 530

Query: 218 IKIPDDPQYI------------MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
           +K      Y+            M VW D+ ++      +    +      +PADL++ G 
Sbjct: 531 VKHLLPDNYVKESDLWKKGTDTMDVWFDSGSS------WAAVCEQRSELKYPADLYLEGS 584

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI--------- 314
           D     F +    +  ++   P  K +     +   G K+SKSLGNV+DP          
Sbjct: 585 DQHRGWFQSSLLTSVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNK 644

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DY 373
           ++    G D LR ++   +    D     + LK+   +D+   + N     +  I   D 
Sbjct: 645 KIEPAYGADVLRLWV-SSVDYSVDVPIGSNILKQL--SDVYRKVRNTARYLLGNIHDYDP 701

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQ 431
           +            D+ +L     V  +I    +N    +    + S   V   + Y D  
Sbjct: 702 NIDSFEIDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIA 761

Query: 432 KPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K      +    R  +  +V  +V+  LA+L+   +  +A  I+  +  + +    +S+ 
Sbjct: 762 KDRLYVSSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNVPYSTKE---KSVF 818

Query: 491 QRLKPGFMLHKTFDPI 506
           QR  P F      + +
Sbjct: 819 QRGWPNFSQSWKNEIL 834



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/451 (13%), Positives = 137/451 (30%), Gaps = 53/451 (11%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-- 70
             Y N   H+GHA   ++ D++ ++  L G  V +  G D HG  I         +++  
Sbjct: 67  PPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNLKSSERK 126

Query: 71  ------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
                        +      N  +      I  ++D+   T +K +      ++ K+   
Sbjct: 127 NLDTLNLRKKATDYAYVQINNQMEGFKRWGIWGNWDNPYLTLKKSYESAQIGVFGKMFLN 186

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY-FFRLSAYQDK 175
           G IY+G     +S        + E+              P +   +  Y   +++   D+
Sbjct: 187 GYIYRGLKPVHWSPSSRTALAEAELEY------------PDEHYSKSIYVSLKITKLSDE 234

Query: 176 LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD----DPQYIMYVW 231
           +L  +             +     + +       + +      KI      D +  +Y+ 
Sbjct: 235 ILLKFYQENPNFKKDFFLSNSFITIWTTTPWTIPANEAVAVNPKINYVFAIDEEKRIYLL 294

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVF 291
              L++ ++     D     + K       V  +DI   H    P    +  + +     
Sbjct: 295 AKELSSEISNKFNKDLTTLLEVKG------VTLEDIEYQH----PTKNKNCRIVIGGDYI 344

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +          +  + G+ ID   V  +  +        +       G +    + K  N
Sbjct: 345 TIESGT---GIVHTAPGHGIDDFNVGRKYDLPTTCVVDEKGNLNEYSGQFQGSNVLKDAN 401

Query: 352 ADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
             + + +       +    K    YD     P  F  +++   S  +       + +++ 
Sbjct: 402 DLIIDYLEEKDLLLLQENYKHRYPYDWRTKKPTIFRATEQWFAS-VNGFRSSALKAIEDV 460

Query: 409 L--IHRALAQVIS-LVSEVDRYFDAQKPWEL 436
                    ++ S +V   D     Q+ W L
Sbjct: 461 EWIPATGKKRIYSMVVGRGDWCISRQRSWGL 491


>gi|325928650|ref|ZP_08189829.1| Isoleucyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540978|gb|EGD12541.1| Isoleucyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 926

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 584 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 643 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDQMVLLDRWIVHRAHELQEKIV 699

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 700 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 759

Query: 460 ILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 760 RWIAPVLSFTAEELWGYLPGQHVDNVLFATWYDGLAP 796



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 31  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 90

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 91  EKKYGKVGVKLDAAQFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 150

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 151 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 186


>gi|315924529|ref|ZP_07920748.1| leucine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622059|gb|EFV02021.1| leucine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 803

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 89/230 (38%), Gaps = 9/230 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R K Y      YP+    H+GH       +V+AR  R+ G +VLF  G D  G      
Sbjct: 30  TRPKFYGLVEFPYPSGVGLHVGHVRAYTSLEVIARKRRMQGYNVLFPIGFDAFGLPTENY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   D N   F      +  S+  D  + TT+  +    + ++ ++   G  
Sbjct: 90  AIKTGKHPREVTDHNIEVFTQQLKAIGYSFDWDHTVDTTDPAYFKWTQWIFLQMYKHGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           YK      +    +   ++++   G      +   +PV  ME++ +F ++  Y +KLL  
Sbjct: 150 YKDHTYVNFCTGCKVVLSNEDFRDGK----CDRCGSPVVQMEKDVWFLKIREYAEKLLQG 205

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
            +      LP  R  +     KS   +++ S    D  +K+       +Y
Sbjct: 206 LD--EVDYLPRIRTEQENWIGKSVGAEINFSIADHDQALKVFTTRADTLY 253



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 121/383 (31%), Gaps = 65/383 (16%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
            N        + Q Y  +  P+ + E  G      +     L     +           E
Sbjct: 413 VNYKMKDWAFNRQRYWGEPIPIVYCEHCGTVPVPESDLPVELPKVSHYEPTDTGESPLAE 472

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSK 252
           +  +V +              G     +    M  W         Y+         D  K
Sbjct: 473 IEDWVNT---------TCPKCGRPARRETD-TMPQWAGSSWYFLRYIDNHNDECLADMDK 522

Query: 253 AKFW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKI 303
            K+W   D +  G + +  H +Y   +         +    P  K+      +   GEK+
Sbjct: 523 LKYWLSVDWYNGGMEHVTRHLLYSRFWHQFLYDIGVVPTKEPYAKRTAQGLILGSDGEKM 582

Query: 304 SKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
           SKS GNV++P ++I E G D LR +++      K   +  +G+K         G    + 
Sbjct: 583 SKSKGNVVNPNDIIAEYGADTLRTYIMFIGDYEKPAPWSDNGIK---------GCRRFLD 633

Query: 364 RSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
           R   +                   + + +   + ++ + E+ +    + A+A ++SL++ 
Sbjct: 634 RVWKL--------QDMVVEGDTFSKELENDMHKTIKRVSEDYEAMKFNTAIAALMSLLNH 685

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +R                    V   T    R    LL    P +  +++++   A E 
Sbjct: 686 FNR--------------------VGQTTKAEYRDFLKLLYPVAPHITEELWEMADFAGE- 724

Query: 484 RCFQSLDQRLKPGFMLHKTFDPI 506
                L Q   P +   KT D +
Sbjct: 725 -----LHQTDWPEYDETKTVDAV 742


>gi|300766055|ref|ZP_07076024.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|300513257|gb|EFK40335.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 806

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 31  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 91  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 151 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 206

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 207 DLDLVDWPENIKDMQRNWIGRSE 229



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 79/455 (17%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 344 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 403

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 404 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 463

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 464 GESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNSEAIADKEKLAEW 523

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 524 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 583

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 584 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 634

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 635 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 691

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------- 478
                             T+    VE       LL    P LA ++++IL          
Sbjct: 692 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTETISYVA 732

Query: 479 ---------VADENRCFQSLDQRLKPGFMLHKTFD 504
                    V DE      ++ ++K    + K+ +
Sbjct: 733 WPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLE 767


>gi|111115076|ref|YP_709694.1| leucyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123341386|sp|Q0SNR0|SYL_BORAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110890350|gb|ABH01518.1| leucyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 840

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+ AR+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFARYKILNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPKKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.3 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 55/395 (13%), Positives = 134/395 (33%), Gaps = 93/395 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 +   + F    Y  + +          +P+E+ +  +   ++     S + ++ 
Sbjct: 417 KETVTYKLRDWVFSRQRYWGEPIPILFDKLGNAIPLEKNDLPLKLPETANYKPSGTGESP 476

Query: 215 DWGIKIPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHV 262
              IK   +            M  W  +   YL         +  +  K ++W P DL++
Sbjct: 477 LSRIKNWVNVKDTDFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANHKKIEYWMPVDLYI 536

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG--------- 300
            G +    H +Y   +         ++   P  K      + +  +    G         
Sbjct: 537 GGAEHTVLHLLYSRFWHKVLYDLGHVNTKEPFKKLINQGIITAFSYQKENGVLIPNDQVI 596

Query: 301 -------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                               K+SKSL NVI+P  +I+E G D++R + +          +
Sbjct: 597 EKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDGIIKEFGADSIRIYEMFMGPLTDSKPW 656

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  G+          G+   +++  ++  K+     P         + I+S   +V++++
Sbjct: 657 NTKGII---------GVFRFLNKIWNLREKELSKDNPP--------KEIMSQLHKVIKKV 699

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+ +    + A++ ++  ++E+ +Y                        + + +   I+
Sbjct: 700 TEDTEKLNFNTAISAMMIFINELSKY--------------------EKNYLNIFKPFIII 739

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLDQRL 493
           L  + P LA ++++ +       +N  +   D+ L
Sbjct: 740 LSPYAPHLAEELWEYIGETPSLFKNSKWPKFDETL 774


>gi|268319013|ref|YP_003292669.1| hypothetical protein FI9785_522 [Lactobacillus johnsonii FI9785]
 gi|262397388|emb|CAX66402.1| leuS [Lactobacillus johnsonii FI9785]
          Length = 804

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIIDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 133/417 (31%), Gaps = 56/417 (13%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                       ++++    +           E   N          Q Y  +  PV   
Sbjct: 372 DGKHINSEFLDGLNNEEAKKRMIEWLEDHNVGEKKVNYKLRDWDFSRQRYWGEPIPVIHW 431

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E+                         LP     +     +S L +L+      D   + 
Sbjct: 432 EDGTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLTDWVNVVDENGRK 480

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWP 276
                  M  W  +   YL      ++          K+ P DL++ G +    H +Y  
Sbjct: 481 GKRETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYAR 540

Query: 277 AFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +         +    P  K +++ G IL   EK+SKS GNV++P EVI+E G D+LR +
Sbjct: 541 FWHKVLYDLGVVPTKEPFQK-LYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMY 599

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESD 387
            +          +D +G                + R   + + D D   IP      E+D
Sbjct: 600 EMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQEKIVDEND 650

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +  V +  ++++ E+ +    + A++Q++  ++                     A   
Sbjct: 651 GELDKVYAETVKKVTEDFEALHFNTAISQMMVFMNA--------------------AQKA 690

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
             +  E       LL    P +  +I+ +    DE+  +    +   P  ++  T +
Sbjct: 691 KIIPREYAEGFVQLLAPVAPHMMEEIWSVFG-HDESIAYAKWPEY-DPAKLVESTVE 745


>gi|284030313|ref|YP_003380244.1| leucyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809606|gb|ADB31445.1| leucyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 828

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 15/235 (6%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E+ Y  T  +YP+   H+GH     + DVLARF    G DV+   G D  G     AA  
Sbjct: 45  ERRYALTMFSYPSGDLHMGHGEVFALHDVLARFWFQQGYDVMNPIGWDSFGLPAENAAIK 104

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                  +   N     +      +S+D    + T++  ++   + L+ +  ++G  Y+ 
Sbjct: 105 RNEHPATYTYANIETQAESIRRYALSFDWSRRLHTSDPEYYRWTQWLFLRFFERGLAYRK 164

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                +   D+    +++V +G            V   E   ++F+ + Y  +LL     
Sbjct: 165 ASYVNWCPNDQTVLANEQVVQG----RCERCGFEVTKRELTQWYFKTTEYAQRLLDDMSL 220

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
                  +E   E++   ++ +     +  +F   ++  D+P  +     D L  
Sbjct: 221 -------LEWPEEILLMQRNWIGRSEGAFASFQ--VEGRDEPIKVFTTRPDTLFG 266



 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 111/281 (39%), Gaps = 36/281 (12%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIY---WPAFLLSANL---- 284
                Y +        D      W PA  +V GK+    H +Y   +   L    L    
Sbjct: 516 WYFLRYCSPDYTEGAFDPEAVNRWMPAYQYVGGKEHAVLHLLYARFFTKALHDMGLLNAV 575

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
               ++ + G ++++G+ +SKSLGN ++  + ++E GVDA+R  +V       D  +   
Sbjct: 576 EPFTRLLNQGQVINEGKAMSKSLGNGVNLGDQLDEFGVDAIRLTMVFAGPPDDDIDW--- 632

Query: 345 GLKKRVNADLANG-IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
                  ADL+ G     + R+  +       +   P A    D ++  +  R + +  E
Sbjct: 633 -------ADLSPGGSLRFLQRAWRLSGSVEAPVGADPAA---GDLALRKITHRTVADATE 682

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +++   +  +A+V+ LV+   +  D         + P  A   +    E +  +AILL 
Sbjct: 683 LIESYRFNVMVARVMELVNATRKAID---------SGPGAADPAVR---EAVETVAILLS 730

Query: 464 AFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              P  A  +++ L  A      ++   ++ P  ++ ++  
Sbjct: 731 LVAPYTAEDMWEQLGHAPT--VAKAGWPKVDPALLVEESVT 769


>gi|91776560|ref|YP_546316.1| isoleucyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91710547|gb|ABE50475.1| Isoleucyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 934

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 17/274 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+   +                  PADL++ G D     F +       +    P
Sbjct: 542 LDVWFDSGATHAAVLKRRSELQS------PADLYLEGSDQHRGWFQSSLLTGCAIDGRAP 595

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  KG K+SKS GN I+P ++   +G D LR ++      G+     ++ 
Sbjct: 596 YDALLTHGFTVDEKGYKMSKSRGNGIEPQDICNRLGADMLRLWIASTDYSGEMS-LSEEI 654

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
           LK+  ++     I N + R +   L D+D          + E D   L++  ++  ++  
Sbjct: 655 LKRVTDS--YRRIRNTL-RFLLANLADFDAQQDLLPVEQWLELDRFGLALTQQLQAQVLA 711

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           +      H A+ +++   SE     Y D  K       +   A  +       +   L  
Sbjct: 712 DFDRYEFHLAVQKLVGFCSEELGGFYLDILKDRLYTSGDKSHARRSAQSALHHITHALMR 771

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           L+   +   A++I++ L +  +   F+     L 
Sbjct: 772 LMAPILSFTADEIWNTLGLDAKATVFEETWYALP 805



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   H+GHA   I+ D++ +   L G D  +  G D HG  I  A
Sbjct: 47  KGAKKFILHDGPPYANGAIHLGHAVNKILKDIIVKSKTLSGFDAPYVPGWDCHGLPIELA 106

Query: 62  AQNAG---VTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +      +           +  +     +     L +   +D    T + +        
Sbjct: 107 VEKQHGKDIPPAKFRELCRAYAAEQVARQKQDFIRLGVLGDWDHPYLTMDFQTEADIIRA 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              I   G +Y+G     + +   +   + EV  
Sbjct: 167 LGDIYKNGYLYQGSKPVHWCVDCGSALAEAEVEY 200


>gi|282856467|ref|ZP_06265744.1| isoleucine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585707|gb|EFB90998.1| isoleucine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 920

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 106/314 (33%), Gaps = 28/314 (8%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G       + I+ VW D+  ++ +       P  S    WP DL++ G D     F
Sbjct: 518 CPHCGSHHLKKGEDILDVWFDSGASHFSVMDVPSRPYLS----WPTDLYLEGADQHRGWF 573

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                 +  ++   P    +     +  +G K+SKSL N + P  +    G D LR ++ 
Sbjct: 574 QTSLLTSVAVAGKAPYRAVLTHGFIVDEQGRKMSKSLQNGVAPERITNRDGADILRLWVA 633

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTE 385
                  D     DG+ K ++ +        +  +   +L + +G  P           E
Sbjct: 634 SADY-RSDVHIS-DGIIKNLSEE-----YRRIRNTARFMLGNLNGFDPARDSVPFDKMPE 686

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT-NPD 442
            D   +S+ +RV++ + E  +    H  +  +           Y DA K        N  
Sbjct: 687 FDRWAMSLLNRVVERVTEGFEAYDFHMPITVIHQFCVGELSSFYLDASKDRLYADEANGL 746

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-------FQSLDQRLKP 495
                  V  + +  LA +L   +   A +I+  L   D +         +   D     
Sbjct: 747 SRRACQTVMWKTVCALARMLAPVISFTAEEIWQQLRTIDASLAESVFLGGWPEADAAETD 806

Query: 496 GFMLHKTFDPIFPR 509
           G ++ K     F R
Sbjct: 807 GALVEKWEKVQFLR 820



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 15/147 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R          Y N   HIGHA    + D + ++  + G  V +  G D HG  I   
Sbjct: 47  KDRRSFMFHDGPPYANGAIHIGHALNKSLKDFIVKYKSMRGYYVPYVPGWDTHGLPIELK 106

Query: 62  AQNAGV-----TTK--------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTC 106
                      T           +  +     R+    L     +D+   T +       
Sbjct: 107 VLKDEHLNKDTTPALELRSECHDYALKWVDVQREGMKRLGCFSLWDEPYLTLKPEFEARE 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDE 133
                 I +KG +Y+G    ++ +  +
Sbjct: 167 LETLATIVEKGFVYRGTKPVYWCIDCQ 193


>gi|167388342|ref|XP_001738527.1| isoleucyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165898196|gb|EDR25129.1| isoleucyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 1056

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 65/417 (15%), Positives = 140/417 (33%), Gaps = 67/417 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +      P+ +     +F  + +++DKL+    S   + +P   R           
Sbjct: 394 HSYPFCWRSDTPLIYRAIPSWFVNVESFKDKLVES--SQQTYWVPENIREGRFENWLRNA 451

Query: 205 KDLSLSRKTFDWG--IKIPDDPQY------------------------------------ 226
           +D ++SR  F WG  I I  D  Y                                    
Sbjct: 452 RDWAISRNRF-WGTPIPIWTDDDYTEFVCVGSVKELEELTGQKVTDLHREFVDNLVIEKN 510

Query: 227 ---------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    +   W ++ +     + Y         + +P D    G D     F+++  
Sbjct: 511 GKKLHRISEVFDCWFESGSMPYGQSHYPFENVEQFKENFPGDFIAEGIDQTRGWFYSLIV 570

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L    P    V +   +   G+K+SK L N  DP+++I   G DALR  L+   A 
Sbjct: 571 ISTALFGKAPFKNCVVNGLVLASDGKKMSKRLKNYPDPMDMINLYGADALRLSLINSPAV 630

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDESI 390
             +        +++   +L + I      ++  + + +   +            + D  I
Sbjct: 631 RAETV----KFQEKTLKELISTIFLPWFNTLRYLKQSFKPEMKIMAIDKIANMNDMDRWI 686

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +++++RE M+   ++  +  ++  LV+  + Y    +             T   
Sbjct: 687 LSSLMSLVKKVREEMKMFRLYTIITPLVDLLVTLSNWYIRLNRKRFRGGYGEAAQETSCS 746

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    ++ ++IL+  F P  +   +  L     N      +++++      +  +P+
Sbjct: 747 VLYHCLKIMSILMAPFTPFFSEFCYQKLKAFPLNY-----EEKMEESVHFVQIPEPL 798



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R +        +    PH GH     I D + R+    G  V    G D HG  I   
Sbjct: 36  KDRPRFSFYDGPPFATGLPHYGHLLAGTIKDTVCRYAIQTGHRVDRKFGWDTHGLPIEFE 95

Query: 62  AQNA--GVTTKV---------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                   TT+                 V + S  ++ +       I  D   +T +   
Sbjct: 96  IDKLLGIHTTEEVLKLGIPKYNQECRNIVMRYSEEWKKVVWRCGRWIDMDHPYKTMDINF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K++ +K  +Y+G     +S       ++ E
Sbjct: 156 MESVWWVFKQLYEKNLVYRGLKIMPFSTGCCTPLSNFE 193


>gi|153002892|ref|YP_001377217.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152026465|gb|ABS24233.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 947

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 126/416 (30%), Gaps = 25/416 (6%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           SY    R             +  +   G           +  D   +      +   G  
Sbjct: 433 SYPHCWRCHNPVVFRATDQWFLSLEHAGLRR-----QALAEIDRVRWIPRWGRERIYGMI 487

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS-FVKSGLKDLS 208
            N     +      G    +   +    +         +      E I  + +    D +
Sbjct: 488 ENRPDWCLSRQRTWGVPIPVFYCEGCSEALVSPSVMERVAEAFEREGIEAWYRHAPADFT 547

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
              +    G       Q I+ VW D+  ++             +    P DL++ G D  
Sbjct: 548 GGERCPACGEGEFRREQDILDVWWDSGVSWAAVAE-------KRGLGVPVDLYLEGSDQH 600

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              FH+    +    A+ P    +     +  +G+ +SKSLGN + P E+I++ G D LR
Sbjct: 601 RGWFHSSLLTSVATRAHAPYRAVLTHGFVLDGQGKAMSKSLGNTVAPDEIIKKYGADILR 660

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
            ++        D     + +     A+    I N V R +   L  +D            
Sbjct: 661 LWVSASDY-RDDVRISSEIV--SGLAEGYTKIRNTV-RYMLGALDGFDPSRDAVPLDELE 716

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNP 441
             D   L+  +   ++++   +    H A    + L  V     YFD  K      K + 
Sbjct: 717 PLDRWALAKLAAWDEKVKAAYEEYEFHLAYHATMQLCAVDLSALYFDIIKDRLYTWKKDG 776

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKPG 496
               +       V + +  LL   +   A++ +  L     E+     L  R +P 
Sbjct: 777 KPRRSAQTALWLVCQDVLRLLAPVLSFTASEAWGHLPGKPAESVFLAGLPTRARPA 832



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   HIGHA   I+ DV+ ++  L G    +  G D HG  I      
Sbjct: 51  KRFVLHDGPPYANGDIHIGHALNKILKDVVVKYRNLKGEVADYVPGWDCHGLPIELKVDK 110

Query: 65  AGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                K              +  +     R+    L +   +DD   T  K +       
Sbjct: 111 ELGPKKRDMDRAQVIEACRAYARKWIERQREAFKRLGVFGRWDDPYTTMSKGYEAEIVRT 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             + ++KG +Y+G    ++ + D     + EV  
Sbjct: 171 LARAAEKGFLYRGKKPVYWCVTDRTALAEAEVEY 204


>gi|51598511|ref|YP_072699.1| leucyl-tRNA synthetase [Borrelia garinii PBi]
 gi|60390682|sp|Q662B4|SYL_BORGA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51573082|gb|AAU07107.1| leucyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 840

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  DG       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 134/390 (34%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E+ +  +   K+     S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAVPLEKNDLPLKLPKTANYKPSRTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL      +  +     K ++W P DL++ G + 
Sbjct: 482 DWVNLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE------------- 301
              H +Y   +         ++   P  K      + +  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKNSK 601

Query: 302 ---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKRDNKEVIQVIAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   + ++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISQLHKAIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  V+E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLSFNTAISAMMIFVNELIKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGETPSLFKNSKWPEFDENL 774


>gi|167948225|ref|ZP_02535299.1| leucyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 168

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 2/130 (1%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +EK Y  +   YP+ + H+GH     I DV+AR+ R+ G +VL   G D  G     AA+
Sbjct: 32  KEKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQGKNVLQPMGWDAFGLPAENAAR 91

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
                   +   N    +     L   Y  D  + T +  ++   + L+ ++  KG +Y+
Sbjct: 92  KNRAAPAAWTYDNIDYMKGQLKRLGFGYDWDRELATCKPDYYKWEQWLFTELYKKGLVYR 151

Query: 122 GCYSGWYSLR 131
                 +   
Sbjct: 152 KNAVVNWDQG 161


>gi|46124945|ref|XP_387026.1| hypothetical protein FG06850.1 [Gibberella zeae PH-1]
          Length = 1093

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 62/422 (14%), Positives = 139/422 (32%), Gaps = 93/422 (22%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + ++ + +  ++ R+    +  L+   +    I P         +++  ++D  +
Sbjct: 496 CDKSKDIIEPIMKPQWWVRMKELAEPALAAVRNGSIKIRPESAEKSYYRWLE-NIQDWCI 554

Query: 210 SRKTFDWGIKIP-------------------------------------------DDPQY 226
           SR+   WG + P                                           +  + 
Sbjct: 555 SRQ-LWWGHRSPVYFAKIEGGAEDIPEEKLWFAGRTRQEAEEKAKAALPGKTYTLEQDED 613

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANL 284
           ++  W  +     +T G+ +       K +  ++   G DIL F    + +    L+  +
Sbjct: 614 VLDTWFSSGLWPFSTLGWPNQTH-DLEKLYSTEVLETGWDILFFWIARMIFFGIKLTGKI 672

Query: 285 PLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI-------------------------- 317
           P  K+V+ H  +   +G K+SKSLGNVIDP+++I                          
Sbjct: 673 PF-KEVYCHSLVRDSEGRKMSKSLGNVIDPLDIIAGVELQTLHDKLTQGNLDPKEVAKAT 731

Query: 318 -----------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
                       + G DA+R+ ++     G D   D   +         N I       +
Sbjct: 732 KYQKTAFPDGVPQCGADAMRFTMINATTGGGDINLDVKII--HGYRKFCNKIFQATKYVL 789

Query: 367 SMILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-- 423
             + +D+           T ++  IL   +   +EI   ++++   ++   V        
Sbjct: 790 GSLPQDFTPSKSGIARGETLAERWILHKMNSAAKEINRALEDREFSKSTLIVYRYWYNEL 849

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            D Y +  K      T  +R S +       +     ++  F+P +  +++  +    E+
Sbjct: 850 CDVYIENSKAIIRDGTEKERESAIQ-TLYTALETALTMIHPFMPFITEEMWQRMPRRPED 908

Query: 484 RC 485
           + 
Sbjct: 909 QT 910



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 19/150 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K+  K  I           H+GHA    + D++ R+ R+ G   L+  G D  G     
Sbjct: 165 IKDEGKFVIVHPPPNVTGALHMGHALGESLQDLMIRWSRMQGKTTLWVPGCDHAGISTQS 224

Query: 61  AAQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +N                    T   + +   +   +    +  SYD      T +K 
Sbjct: 225 VVENMLWRRHGLTRRDLGREKFVNTVWEWKEDYHKRINNTLCKMGGSYDWSREAFTMDKN 284

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
                   W ++ ++G IY+      +  +
Sbjct: 285 LSAAVTETWVRLYEEGTIYRANRLVNWCTK 314


>gi|227364736|ref|ZP_03848785.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682637|ref|ZP_08162154.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070195|gb|EEI08569.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978476|gb|EGC15426.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 950

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 23/279 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 538 FTKETDIMDVWFDSGSSHQGVLAER------DYLTYPADLYLEGSDQYRGWFNSSLITSV 591

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + S + P  + V     +  +G K+SKS GNVIDP +V++++G + +R +++       D
Sbjct: 592 VCSGHAPYKEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVMSADTSA-D 650

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                   ++   A         +  +   +L +     P             D+ +L  
Sbjct: 651 VRVSMGTFQQISEA------YRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVK 704

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +  L+ +RE+  N     A   +I+ V       Y +  K    ++  N +   ++  V
Sbjct: 705 LNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTV 764

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +++  L  LL   +P    +++  +   ++      +
Sbjct: 765 FYDILLTLVKLLTPILPHTTEEVWSYMNEPEDFVQLTEI 803



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 64  EGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQ 123

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +G   K             +  +     R     L +S  +D    T +K       
Sbjct: 124 LTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQI 183

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ + + KG +Y+     ++S   E+   + EV   
Sbjct: 184 RVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 220


>gi|42518602|ref|NP_964532.1| leucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81668177|sp|Q74KS1|SYL_LACJO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|41582887|gb|AAS08498.1| leucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329666886|gb|AEB92834.1| leucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 804

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIIDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 135/417 (32%), Gaps = 56/417 (13%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                       ++++    +           E   N          Q Y  +  PV   
Sbjct: 372 DGKHINSEFLDGLNNEEAKKRMIEWLEDHNVGEKKVNYKLRDWDFSRQRYWGEPIPVIHW 431

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E+                         LP     +     +S L +L+      D   + 
Sbjct: 432 EDGTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLTDWVNVVDENGRK 480

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWP 276
                  M  W  +   YL      ++          K+ P DL++ G +    H +Y  
Sbjct: 481 GKRETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYAR 540

Query: 277 AFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +         +    P  K +++ G IL   EK+SKS GNV++P EVI+E G D+LR +
Sbjct: 541 FWHKVLYDLGVVPTKEPFQK-LYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMY 599

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESD 387
            +          +D +G                + R   + + D D   IP      E+D
Sbjct: 600 EMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQEKIVDEND 650

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +  V +  ++++ E+ +    + A++Q++  ++                    +A T+
Sbjct: 651 GELDKVYAETVKKVTEDFEALHFNTAISQMMVFMNAA-----------------QKAKTI 693

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                E       LL    P +  +I+ +    DE+  +    +   P  ++  T +
Sbjct: 694 PR---EYAEGFVQLLAPVAPHMMEEIWSVFG-HDESIAYAKWPEY-DPAKLVESTVE 745


>gi|229582044|ref|YP_002840443.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012760|gb|ACP48521.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 980

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 135/373 (36%), Gaps = 21/373 (5%)

Query: 131 RDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +DE     + V    D      +     ++        F  +     +     +      
Sbjct: 353 KDEMLKEIENVNWIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICEKCNNVIVVGS 412

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDW----GIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             +  +  I  V + L    +           G+        +  VW D+   +  + G 
Sbjct: 413 REDLESIAIDSVPNDLHRPWIDNVRVKCNKCGGVAKRITD--VADVWFDSGVAFFASLGK 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                  +    P DL + G D L   F ++     +L    P    +     +  +G +
Sbjct: 471 DWQEKWKELG--PVDLVLEGHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGFMLDEQGRE 528

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN ++P  VI+  G D LR +L+R     +D  +    L +    DL       V
Sbjct: 529 MHKSLGNYVEPSVVIQRYGRDILRLWLLRNTT-WEDARFSWRAL-ELTKRDLQIIWNTYV 586

Query: 363 SRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             S+ M L +++ +  T           D  ILS  + +L+++ E+M+N  +H     +I
Sbjct: 587 FASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSMLKKVNESMKNYKVHEMANYLI 646

Query: 419 SL-VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  V +V R Y    +     + N      + Y+   +++Q  IL    +P ++ KI+  
Sbjct: 647 NFLVEDVSRFYIRLIRKRAWIEANTQDKIAMYYILYFILKQCIILASTIIPFISEKIYKS 706

Query: 477 LFV-ADENRCFQS 488
             V   E+   +S
Sbjct: 707 FVVNPKESVSMES 719



 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 20/155 (12%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAA------------------QNAGVTTKVFVDQNS 77
           R+ RL G  V    G D HG  I  A                   +N     K F   N+
Sbjct: 2   RYERLLGKKVHDQPGYDTHGLPIEVATERLLGILNKQEIIDKIGVENFINKCKEFALSNA 61

Query: 78  RNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
                    + +   ++    T +  +  +   + KK  +KG + KG     +  R E  
Sbjct: 62  TKMTQNFKDVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETT 121

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
            +D EV +  D +  +         EE  Y    +
Sbjct: 122 LSDYEVSEYRDLEDPSIYVKFKIKGEENRYLLIWT 156


>gi|222100204|ref|YP_002534772.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782448|sp|B9K8X3|SYI_THENN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 918

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 119/318 (37%), Gaps = 20/318 (6%)

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
            F+  +E+      F K   + +    +    G +  +     + VWID+ +++   T  
Sbjct: 481 HFMKIVEKEGTNAWFEKDVEELIPDDFRCPKCGARSFEKMLDTLDVWIDSGSSFEYITTR 540

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                  +   +P D+++ G D     FH+  + A     + P  + +         G K
Sbjct: 541 -------EDHPFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHGFIKDELGRK 593

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           +SKSLGNV+DP+EV+E+ G + LR +L        D       ++++   ++   I N  
Sbjct: 594 MSKSLGNVVDPMEVVEKYGAEILRLWLASSDYF-NDIKISMRIVEQQ--TEVYKKIRNTF 650

Query: 363 SRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            R +   L+D+D              D+  L     +++   E   +    +    V+  
Sbjct: 651 -RFLLGNLEDFDPELDRVPYEKLLTIDKWALGRLQEIIKRATEYYDSYEFSKVYNLVVKY 709

Query: 421 V--SEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                   Y D  K     +        +   V  E++  L  +L   +     +++  L
Sbjct: 710 CTTELSSLYLDVVKDRLYVEAKDSLYRRSAQTVMHEILIALMKILAPIMTFTMEEVYSHL 769

Query: 478 FVADENRCFQSLDQRLKP 495
              +++R ++++     P
Sbjct: 770 H--EKDRKYKTVQAEYWP 785



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 56/158 (35%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIG A   I+ D++ ++  + G    +  G D HG  I   
Sbjct: 45  KGKPLFVLHDGPPYANGHIHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHR 104

Query: 62  AQNA------GVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                      ++        + F  +     ++    L +   +++   T +  +    
Sbjct: 105 VSQELGDRIKEMSPAEIRKKCEEFALKFVEIQKEEFKRLGVRGDWNNPYITLKPDYEVKI 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++K + ++G++Y+     ++  R      + E+   
Sbjct: 165 LDVFKTLVEQGNVYRSLKPIYWCPRCRTALAEAEIEYH 202


>gi|323935077|gb|EGB31444.1| isoleucyl-tRNA synthetase [Escherichia coli E1520]
          Length = 938

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I    +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNEYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|254578242|ref|XP_002495107.1| ZYRO0B03498p [Zygosaccharomyces rouxii]
 gi|238937997|emb|CAR26174.1| ZYRO0B03498p [Zygosaccharomyces rouxii]
          Length = 1071

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 100/262 (38%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y            PA+    G D     F+ +      L  
Sbjct: 522 EEVFDCWFESGSMPYAQLHYPFENTEEFKYRVPANFISEGLDQTRGWFYTLSVLGVQLFG 581

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
            +P    + S   +   G K+SKSL N  DP  V+++ G DALR +L+       +   +
Sbjct: 582 EVPYKNVIVSGIILAADGRKMSKSLKNYPDPNIVLDKYGADALRLYLINSPVLKAETLKF 641

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSR 396
            ++G+K+ V+  L     +      S ++     + D    P        D  IL+    
Sbjct: 642 KEEGVKEVVSKVLLPWWNSFKFLEGSIALLKKTSNVDFKYNPAATTDNVMDRWILASLQS 701

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I + M+   ++  + ++++ + E+ + Y    +     +   + +   L    E +
Sbjct: 702 LVQYIHQEMEVYKLYSVVPRLLNFIDELTNWYIRFNRRRLKGENGVEDSLKALNTLFEAL 761

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
                 +  F P L++ I+  L
Sbjct: 762 FTFVRAMAPFTPFLSDAIYRRL 783



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I DV+ R+  + G  V    G D HG  I   
Sbjct: 34  KDKPEFSFFDGPPFATGTPHYGHILASTIKDVVPRYATMTGHHVDRRFGWDTHGLPIEHI 93

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V   +  +R     L   I +D+  +T     
Sbjct: 94  IDKELGITGKEDVFRYGLENYNNKCKSIVMTYASEWRKTIGRLGRWIDFDNDYKTMYPSF 153

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ ++G +Y+G     YS+      ++ E  +   
Sbjct: 154 MESEWWAFKQLYERGQVYRGFRVMPYSVGCTTPLSNFEAQQNYK 197


>gi|225631279|ref|ZP_03787959.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591024|gb|EEH12226.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 1067

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 73/484 (15%), Positives = 148/484 (30%), Gaps = 30/484 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----Y 91
           F+     D+      D  G+  A+ +  AGV      D   +  ++  +          Y
Sbjct: 334 FYLCQSHDIPVICPIDNSGKFTAEISDLAGVHVFDTNDIVIKKLKEQGNWFKTEQYIHNY 393

Query: 92  DDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +    K  S   ++ K        +RD  +    E       
Sbjct: 394 PHCWRTDTPLIYRTMPSWYVAVTKFKSRMVELNKRVNWIPNHIRDGQFGKWLEGAHDWSI 453

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +   +                    L  +   ++    +  +  L
Sbjct: 454 SRNRFWGTPIPVWKSDDARYPRVD---------VYGSIEELERDFNVKIDDLHRPFIDTL 504

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           +        G  +      +   W ++ +       Y       + K W      I + I
Sbjct: 505 TRPNPDDPTGKSVMRRVPDVFDCWFESGSMPFAQIHYPF-----ENKEWFESADFITEYI 559

Query: 268 L----RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
                 F+ ++  +  L    P    +     +  KG+K+SK L N  DP+EV +  G D
Sbjct: 560 AQTRGWFYTLFVLSTALFDREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDRYGSD 619

Query: 324 ALRYFLVREIACGK-DGFYDKDGLKKRVN-ADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           ALR+ ++        +   DK+G   R    ++   I N           D         
Sbjct: 620 ALRFLMLSGSIVCGGNLLLDKEGNSIRDVLKNVIKPIWNSYHFFTMYANADGIKAEVCKD 679

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             +  D  ++S C   ++ I+ +M +     A   +++    ++ ++  +      K++ 
Sbjct: 680 YQSTIDHYMISKCFEAIESIQASMNSYNSQEACKILMNFFEVLNNWYIRRSRERFWKSDL 739

Query: 442 DRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           D+  T    V   V   +       +P +   I+  L   + +    +  Q  K    L 
Sbjct: 740 DQDKTDAYNVLYTVFYYILRAAAPLLPLITENIWQGLKYEETSVHLANFPQLEKFDSQLI 799

Query: 501 KTFD 504
              D
Sbjct: 800 AKMD 803



 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 20  PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA-------------- 65
           PH GH     I D  AR+  +    V    G D HG      A+                
Sbjct: 3   PHYGHLLTGFIKDAFARYQTMLQKRVERRFGWDCHGLPAEMGAEKELGISGRTEIEKFGI 62

Query: 66  -------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                    +   F  +  +     A  +D   D   +T +K   ++    +K++ DKG 
Sbjct: 63  DKFNDHCRTSVMKFSSEWEKYVNRQARWVDFHNDY--KTMDKSFMESVMWAFKQLYDKGL 120

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
           +Y+      YS   E   ++ E       +   ++   V +   E      S  +   L 
Sbjct: 121 VYESVRVVPYSWACETPLSNFETRLDNAYREKTSKAVTVAFELLENPQQFKSVKRKCKLL 180

Query: 179 YYESHPE 185
            + + P 
Sbjct: 181 AWTTTPW 187


>gi|159905582|ref|YP_001549244.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159887075|gb|ABX02012.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 1034

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 117/323 (36%), Gaps = 17/323 (5%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +   L  +  +    YE         ER NE  +         +     T   G K+   
Sbjct: 467 WGIPLPIWICEECENYEVIGSVDELTERANEKDLDLSDIHKPAVDKITLTCSCGGKMKRT 526

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           P  ++ VW D+      + G              A     G D +   F++ +  + ++ 
Sbjct: 527 PD-VLDVWYDSGLAPYASMGSKTLKK--------AKFITEGNDQVTKWFYSQHALSAVVF 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +    K +     +   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +
Sbjct: 578 DDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRF 637

Query: 342 DKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
               + +     + N + N  + S   M+L D+           + D  ILS  + V +E
Sbjct: 638 SYSEMDE--TRSMLNTLWNSYAFSANYMVLDDFVPNDEYFKHVKDEDAWILSRINTVAKE 695

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             E ++   +H     +   V       Y    +     + N  +  +       VI +L
Sbjct: 696 AVEALEKPHLHTYTWTLRDFVLNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKL 755

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++    P L+ +I+  L   D
Sbjct: 756 ISIMAPVTPHLSEEIYQNLKTED 778



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 20/157 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 37  PEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F   N          L I   +++      + + +
Sbjct: 97  EFNIGSKKDIETKIGTLEFINKCKEFALNNLEFMEGQFKNLGIWLDFENAYMPITRDYME 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 KK  +K  + K   SG++  R E    + EV
Sbjct: 157 MGWWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHEV 193


>gi|145634139|ref|ZP_01789850.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268583|gb|EDK08576.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 941

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 130/400 (32%), Gaps = 46/400 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
            K  Y   +  +    +    + + G + Q    Q       V+W+ + G        ++
Sbjct: 400 IKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVEN 459

Query: 175 KLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----- 226
           +          + +P+      E        L  L    K     GI+   D        
Sbjct: 460 RPDWCISRQRTWGVPMTLFVHKETKELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLG 519

Query: 227 -----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + Y +        +G        D+++ G D     F + 
Sbjct: 520 ADAETYRKVPDTLDVWFDSGSTYSSVVANRLEFNGQDI-----DMYLEGSDQHRGWFMSS 574

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +    +  P  + +     +  +G K+SKS+GN++ P EV+++ G D LR ++    
Sbjct: 575 LMLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTD 634

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
             G+    D+  + KR     A      +  +   +L + +G  P      P      D 
Sbjct: 635 YTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEDMISLDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
             ++       EI++   N   H  + +++   S      Y D  K  +   K +     
Sbjct: 688 WAVACALDAQNEIKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARR 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +       +   L   +   +   A++I+  L   +  R 
Sbjct: 748 SCQTALWHIAEALVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              PV+  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPVESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|320540430|ref|ZP_08040080.1| isoleucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029361|gb|EFW11390.1| isoleucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 938

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 61/397 (15%), Positives = 128/397 (32%), Gaps = 48/397 (12%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-----VQWMEEEGYFFRLS 170
            G+     Y   +  +    +     +  +  Q    Q +      V+W+ + G     +
Sbjct: 395 HGEKMVHSYPCCWRHKTPIIFRATPQWFISMDQKGLRQQSLEEIKGVRWIPDWGQARIET 454

Query: 171 AYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
              ++          + +P+     +  E +      L +    R     GI+   D   
Sbjct: 455 MVANRPDWCISRQRTWGVPMSLWVHKDTEQLHPRSVELMEEVAKRVE-QGGIQAWWDLDA 513

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                            + VW D+ + + +         G     + AD+++ G D    
Sbjct: 514 ADILGADAADYQKVPDTLDVWFDSGSTHASVVDVRPEFHG-----YSADMYLEGSDQHRG 568

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +  +    P  + +     +  +G K+SKS+GN + P EV+ + G D LR +
Sbjct: 569 WFMSSLMISTAMKGKAPYREVLTHGFTVDGQGRKMSKSIGNTVSPQEVMNKPGGDILRLW 628

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAF 383
           +      G+    D+  + KR     A      +  +   +L + +G  P      P   
Sbjct: 629 VASTDYTGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFEPSTDCVAPEEM 681

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTN 440
              D   +       Q+I +   N   H  + +++   S      Y D  K  +   K +
Sbjct: 682 VVLDRWAVGRALAAQQDIEQAYANYDFHEVVQRLMQFCSVEMGSFYLDIIKDRQYTAKRD 741

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +       +   L   +   +   A++I+  L
Sbjct: 742 SIARRSCQTALFHIAEALVRWMAPIMSFTADEIWGFL 778



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 58/206 (28%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLAGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   ++    T + +     
Sbjct: 106 VEQLYGKPGEKLSAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWERPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G + KG     +     +   + EV                         
Sbjct: 166 IRALGKIISNGHLLKGAKPVHWCTDCGSSLAEAEVEYYDKTSPSIDVAFHAADAAAVAAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSDLSGFISLVIWTTTPWTLPANR 251


>gi|313637043|gb|EFS02610.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 921

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 108/282 (38%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGESPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFEPTTNGVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSKDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYESVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDLPE 784



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  DRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|307178944|gb|EFN67462.1| Probable leucyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 811

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              YP+   H+GH     I+DVLARF+RL G +V+   G D  G     AA    +   V
Sbjct: 1   MFPYPSGALHMGHVRVYTISDVLARFYRLKGKNVIHPMGWDAFGLPAENAAIERKIDPAV 60

Query: 72  FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +  +N +   D    L+ S+D      T +  ++   + L+ K+ DKG  Y+      + 
Sbjct: 61  WTSENIKTMHDQLKKLNYSFDWEREFATCDADYYKWTQDLFLKLFDKGLAYQKKAYVNWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             D+    +++V      Q        V+    + +F + +A+   L+   +      L 
Sbjct: 121 PIDQTVLAEEQVDLN---QRSWRSGAIVEKKLLKQWFIKTTAFAKSLMEGLDDPN---LK 174

Query: 190 IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
             R    +     G  +           I    +    + +W D  
Sbjct: 175 DWRDIIKLQKHWIGDCNGINIDFKMISEIPDFPE---TINLWTDMP 217



 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 81/189 (42%), Gaps = 19/189 (10%)

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL--KKR 349
           S   +    EK+SKS  N ++P  ++ + G+D  R  ++ ++A      + +D +   K 
Sbjct: 522 SGEVVFMSWEKMSKSKYNGVEPFNLLHKYGIDTTRLLILGDVAPTSTRNWSEDTIPGIKN 581

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENM-QNQ 408
               + N +    S+   + L+++      P  + E +  +    +  L+ +  NM + Q
Sbjct: 582 WQNRIWNSVKQFKSQRDCISLEEFQNEPTDPT-YVEHNAYMFDSRNYFLKNVTHNMVKTQ 640

Query: 409 LIHRALAQVISLVSEVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQAFVP 467
            +  A++++  L + + +         L+K+   +RA  V            I+L  F P
Sbjct: 641 QLSIAISRMQGLTNSLRKVSIEC----LRKSREYERALAVQ----------IIMLAPFAP 686

Query: 468 KLANKIFDI 476
             A++++ I
Sbjct: 687 HFASELWAI 695


>gi|296157165|ref|ZP_06840001.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295892501|gb|EFG72283.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 945

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   +++ + +  +I  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHARPVEDWLEIDRYAVALSANLQNDILS 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  T  D  +  +       +   L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYHIAHGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            L+  F+   A + + I     E
Sbjct: 781 RLMAPFLSFTAEEAWKIFEPNSE 803



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGDWDNPYKTMNFTNEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|294634955|ref|ZP_06713473.1| isoleucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091664|gb|EFE24225.1| isoleucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 948

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 120/363 (33%), Gaps = 38/363 (10%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTF 214
           W+   G     S   ++          + +P+     +  + +    + L +    R   
Sbjct: 454 WIPAWGKARIESMVANRPDWCISRQRTWGVPMAMLVHKETQELHPRTTELMEAVAQRVE- 512

Query: 215 DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
             GI+   D                    + VW D+ +   +                P 
Sbjct: 513 QSGIQAWWDLDIRELLGDEADQYEKVPDTLDVWFDSGSTSYSVVD----ARPEFGGHSP- 567

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D+++ G D     F +    A  +    P  + +     +  +G K+SKS+GNV+ P +V
Sbjct: 568 DMYLEGSDQHRGWFMSSLMIAVAMKGKAPYRQVLTHGFTVDGQGRKMSKSVGNVVSPQQV 627

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + ++G D LR ++      G+    D+     + +AD    I N   R +   L  +D  
Sbjct: 628 MNKLGGDILRLWVASTDYTGEMAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPR 683

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
             +  P      D   +    +   EI    +N   H  + +++   S      Y D  K
Sbjct: 684 KDMVKPEEMVVLDRWAVGCAKQAQDEIIAAYENYDFHEVVQRLMQFCSVEMGSFYLDIIK 743

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLD 490
             +   K++     +       +   L   +   +   A++I+  L        F +   
Sbjct: 744 DRQYTAKSDSVARRSCQTALYHIAEALVRWMAPILSFTADEIWGYLPGERAQFVFTEEWY 803

Query: 491 QRL 493
           QRL
Sbjct: 804 QRL 806



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 16/162 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  QGKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +            ++  FR+                        +  + ++   GD   
Sbjct: 106 VEQLIGKPGE--KYSAAEFREQCRAY-----------AAEQVAGQKADFIRLGVLGDWEH 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
              +  Y            +    D  +      PV W  + 
Sbjct: 153 PYLTMDYGTEANIIRALARI---VDNGHLMKGAKPVHWCPDC 191


>gi|225679247|gb|EEH17531.1| valyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1016

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 99/303 (32%), Gaps = 47/303 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
             +  DP  ++  W  +     +T G+  N      K +P  +   G DIL F    +  
Sbjct: 528 FTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFEKLYPTSVLETGWDILFFWVARMIM 585

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------ 317
               ++  +P  +          +G K+SKSLGNVI+PI+VI                  
Sbjct: 586 LGIKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVINPIDVIEGIKLQDLHEKLKHGNLA 645

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ LV     G D  +D   +         N I
Sbjct: 646 EKEITIATKYQKKAFPKGIPECGTDALRFALVTYTTGGGDINFDIQVI--HGYRRFCNKI 703

Query: 359 GNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  +  +  D+         G  + S+  IL   ++  +   E+++N+    A + 
Sbjct: 704 YQATRYVLGKLGDDFKPQASPTKTGKESLSERWILHKFNKAAKIANESLENRDFSVAAST 763

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D + +  K         +   +        +     L+   +P +  +++
Sbjct: 764 LYQYWYSQLCDVFIENSKSLLQPDVPAEVQQSAKETLYTALEGALTLIHPTMPFITEELW 823

Query: 475 DIL 477
             L
Sbjct: 824 QRL 826



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE+ K  I           H+GH     + D + R+ R+ G  VL+  G D  G     
Sbjct: 88  VKEKGKFVIPIPPPNVTGDLHMGHGLTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 147

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 148 VVEKILWKTEGKSRHDVGREVMTNMIWDWTHKYHDSITTTLKRLGGSFDWTREAFTMDEN 207

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 208 LSAAVTETFVRLHEEGIIYRENRLVNWC 235


>gi|297624343|ref|YP_003705777.1| leucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165523|gb|ADI15234.1| leucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 835

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 20/236 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++E  Y  T   YP+   HIGH Y   I D  ARF R+ GL+VLF  G D  G     A
Sbjct: 43  SDQEPFYYLTMFPYPSGDLHIGHWYAFSIPDAYARFKRMRGLNVLFPMGFDAFGLPAENA 102

Query: 62  AQNAGV-----TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKIS 114
           A  A              +   +       +  S+D    + T +  ++   ++ + ++ 
Sbjct: 103 AIKAARQGGSVHPATLTYERMAHMERQFAKMGASFDWSKKVVTCDPGYYRWNQLFFLRML 162

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQD 174
           ++G  Y+      +   D+    +++V  G            V+      + F+++AY +
Sbjct: 163 ERGLAYRKASFVNWDPVDQTVLANEQVVNG----RGERSGALVERRLMPQWHFKITAYAE 218

Query: 175 KLLSYYESHPEFILPIERRNE---------VISFVKSGLKDLSLSRKTFDWGIKIP 221
           +LL +        + + + N                     +  +R    WG+   
Sbjct: 219 ELLDFSGLDWPEKVKLMQTNWIGRSEGAEVRFKTESGDELVVFTTRPDTLWGVTFM 274



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 123/339 (36%), Gaps = 49/339 (14%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVISFVKSGLKDLSLSRKT 213
                +      Y    +         ++P    N      E ++F+ +G   L      
Sbjct: 438 YRLRDWLISRQRYWGTPIPVLYCDRCGLVPEREENLPVLLPEDVAFMPTGESPLKHHAGF 497

Query: 214 FDWGIKIPDDPQY----IMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGK 265
            +        P       M  ++D+   +             D  +A+ W P D +  G 
Sbjct: 498 LNATCPSCGGPAQRETDTMDTFVDSSWYWFRYLSPDLQDAPIDRQRARRWTPVDQYTGGI 557

Query: 266 DILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
           +    H +Y   F         +  + P  +       +    EK+SKS GNV++P +++
Sbjct: 558 EHAILHLLYARFFTKVLRDLGFVDVDEPFKRLRNQGMILGEDNEKMSKSRGNVVNPDDLV 617

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
            E G D +R +L+        G +   G++         G+   ++R  +++ +  +   
Sbjct: 618 AEYGADTVRAYLMFIGPWEAGGPWSSTGIE---------GVARFLNRVWALLTEPVEATG 668

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELK 437
             P    E+ +++       ++E+ E+++    + A+A++++L + + R     KP  L 
Sbjct: 669 GDP----ETRKALRRAVHHAIKEVTEDLEAFGFNTAVAELMTLTNAMSR----AKP-ALA 719

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            T+      V     E +  L        P LA+++++ 
Sbjct: 720 GTD------VWEEATEALLLLLA---PIAPHLADELWER 749


>gi|31545|emb|CAA41990.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1265

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N  +W      ++        +     + P    P  R            
Sbjct: 706  HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 765

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 766  EKAAKEFGVSPDKISLQQDED-VLDTWFFSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 823

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 824  HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 883

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L   ++ G+D   D + 
Sbjct: 884  QGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNR 943

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 944  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 1001

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1002 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 1060

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1061 LSPFMPFVTEELFQRL 1076



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 397 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 456

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 457 EAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 490


>gi|330831173|ref|YP_004394125.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328806309|gb|AEB51508.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 953

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 129/412 (31%), Gaps = 36/412 (8%)

Query: 84  ADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             V + SY    R             +  +  KG   +         +D          +
Sbjct: 401 HKVFNHSYPHCWRHKTPIIFRATPQWFISMEQKGLRKRALEEIERIEKDGI------AQQ 454

Query: 144 GADGQYYNAQHNPVQWM---EEEGYFFRLSAYQDKLLSYYESHPEFILPIE---RRNEVI 197
           G  G       N +Q M     +    R   +   +  +     + + P           
Sbjct: 455 GQSGWVPAWGKNRIQAMVENRPDWCISRQRTWGVPISLFVHKETQELHPESVRLMHEVAK 514

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
              +SG++      K    G       +    + VW D+ + + +        +G     
Sbjct: 515 RVEQSGIQAWWDLDKAELLGADADMYDKVPDTLDVWFDSGSTHASVVDARPEFNGK---- 570

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            PAD+++ G D     F +       +    P  + +     +  +G K+SKS+GNV+ P
Sbjct: 571 -PADMYLEGSDQHRGWFMSSLMIGVAMKDKAPYNQVLTHGFTVDGQGRKMSKSIGNVVSP 629

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V+ ++G D LR ++      G+      + LK+  +A         +  +   +L + 
Sbjct: 630 QDVMNKLGADILRLWVASTDYTGEMTV-SDEILKRSADA------YRRIRNTARFLLANL 682

Query: 374 DGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
           +G  P      P      D   +     V  EI         H    +++   S      
Sbjct: 683 NGFNPATDMVAPADMVVVDRWAVGRAKAVQAEIMAAFDEYNFHGVTQKLMQFCSIEMGSF 742

Query: 427 YFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           Y D  K  +   K +     +       +   +   +   +   A++I+ +L
Sbjct: 743 YLDVIKDRQYTAKADSLARRSCQTALYHIAEAMVRWMAPIMSFTADEIWALL 794



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 46/156 (29%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GKPSFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGFDSPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL------- 109
           +              F  +  +  +   +     +       +  H              
Sbjct: 107 EGMVGKPGEKVSAAEFRAECRKYAKTQIEAQKTDFIRLGVLGDWEHPYLTMDFGTEANII 166

Query: 110 --WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               KI + G ++KG     +     +   + EV  
Sbjct: 167 RSMAKIVENGHLHKGSKPVHWCTDCGSALAEAEVEY 202


>gi|216263987|ref|ZP_03435981.1| leucyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980031|gb|EEC20853.1| leucyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 840

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+ AR+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFARYKILNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   K   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPKKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/395 (13%), Positives = 135/395 (34%), Gaps = 93/395 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 +   + F    Y  + +          +P+E+ +  +   ++     S + ++ 
Sbjct: 417 KETVTYKLRDWVFSRQRYWGEPIPILFDKLGNAIPLEKNDLPLKLPETANYKPSGTGESP 476

Query: 215 DWGIKIPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHV 262
              IK   +            M  W  +   YL         +  +  K ++W P DL++
Sbjct: 477 LSRIKDWINVKDTDFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANHKKIEYWMPVDLYI 536

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG--------- 300
            G +    H +Y   +         ++   P  K      + +  +    G         
Sbjct: 537 GGAEHTVLHLLYSRFWHKVLYDLGHVNTKEPFKKLINQGIITAFSYQKENGVLIPNDQVI 596

Query: 301 -------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                               K+SKSL NVI+P ++I+E G D++R + +          +
Sbjct: 597 EKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPW 656

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  G+          G+   +++  ++  K+     P         + I+S   +V++++
Sbjct: 657 NTKGII---------GVFRFLNKIWNLREKELSKDNPP--------KEIMSQLHKVIKKV 699

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+ +    + A++ ++  ++E+ +Y                        + + +   I+
Sbjct: 700 TEDTEKLNFNTAISAMMIFINELSKY--------------------EKNYLNIFKPFIII 739

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLDQRL 493
           L  + P LA ++++ +       +N  +   D+ L
Sbjct: 740 LSPYAPHLAEELWEYIGETPSLFKNSKWPKFDETL 774


>gi|297543846|ref|YP_003676148.1| leucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841621|gb|ADH60137.1| leucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 816

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLKEMGATFDWDYEVITCLPEYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQINWIGKSD 225



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 110/295 (37%), Gaps = 35/295 (11%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G ++ DG+K            N V R +   ++  +    T
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKAISR------FVNRVERFIDKFIETRNNPGKT 646

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +  +  V    ++ + E+ +    + A+A+++ LV+ + +Y            
Sbjct: 647 KDEMGKDENELNYVRHYAIKSVTEDAERFQFNTAIARIMELVNALYKY-----------D 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                  + +   +V+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 696 TDVEVKNIEFY-EDVVADLIRLLAPFAPHFSEEMWEKLGYEYSVFNQKWPKWDEK 749


>gi|148270551|ref|YP_001245011.1| isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166229777|sp|A5IML2|SYI_THEP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|147736095|gb|ABQ47435.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 919

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 105/281 (37%), Gaps = 25/281 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VWID+  +      +       +   +P D+++ G D     FH+  + A     + P
Sbjct: 524 LDVWIDSGAS------FEYITTKREDHPFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAP 577

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +        +G K+SKSLGNV+DP+EV+E+ G + LR +L        D       
Sbjct: 578 YKEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYF-NDIKISMRI 636

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVLQE 400
           ++++        +   +  +   +L + +G  P             D   L     +++ 
Sbjct: 637 VEQQTE------VYRKIRNTFRFLLGNLEGFDPELDRVPYEKLLTIDRWALGRLQEIIKR 690

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQ 457
             E   +    +    V+          Y D  K    ++  +     +   V  E++  
Sbjct: 691 ATEYYDSYEFSKVYNLVVKYCTTELSSLYLDVVKDRLYVEAKDSIYRRSAQTVMHEILIA 750

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
           L  +L   +     +++  L   +++R ++++     P + 
Sbjct: 751 LMKILAPIMTFTMEEVYSHLH--EKDRKYKTVQAEYWPEYK 789



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIG A   I+ D++ ++  + G    +  G D HG  I   
Sbjct: 45  KGKPLFVLHDGPPYANGHIHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHR 104

Query: 62  AQNA------GVTT-------KVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                      ++        + F  +     R+    L +  D      T +  +    
Sbjct: 105 VSQELGEKIKEMSPAEIRKKCEEFALRFVDIQREEFKRLGVRGDWENPYITLKPDYEVKI 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++K + ++G++Y+     ++  R      + E+   
Sbjct: 165 LDVFKTLVEEGNVYRSLKPIYWCPRCRTALAEAEIEYH 202


>gi|326422518|gb|EGD71914.1| Aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 779

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 146/414 (35%), Gaps = 22/414 (5%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
               + K         +          DE Y    ++           +  P Q  +   
Sbjct: 334 AVDKIEKIKHRTPMCDRSKIPIEIIPMDEYYVKVTDIRDRLIELANELEIIPEQHKQILI 393

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL------SRKTFDWGI 218
            + ++S         Y      +       E +   +              S+ +   G 
Sbjct: 394 NWLKVSNDWPISRRRYYGTEIPLWYCNNCGEPLVPEEGKYYIPWKELPPEGSKCSKCNGD 453

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WP 276
           K   D +     W+D+  + L  T YL + +   +K +P  L   G DI+R    Y    
Sbjct: 454 KFTGDTR-TFDTWMDSSVSALYVTKYLYDKEF-FSKTYPMTLRPQGIDIVRTWLNYSILR 511

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L+  LP          +   GEK+SKS GN +DP  VIE+ G DA R++ V E   G
Sbjct: 512 NYQLTEKLPWKTAWIDGMGLDEHGEKMSKSKGNGVDPTIVIEKYGADAFRFWAVSEAMPG 571

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            +  + +  L+    +     + N+       ++K +      P   TESD  I+    +
Sbjct: 572 SNFMFSESRLQGS--SKFLTKLWNVAR-----LIKQFPAQEDRP-TITESDRWIIEYTKK 623

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKT-NPDRASTVLYVTVE 453
           +  E  +  +    +    ++   +  V    Y +  K     +  + +   + LY    
Sbjct: 624 ITNECVDAYKKLNPYLPANKIREFIWNVFAPHYLELIKARAYGEGFSEEEKESALYTLNS 683

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             ++L +LL    P + + I+  L+ + E+  +Q++    +    + +T + + 
Sbjct: 684 TFKELLLLLAPITPFITDTIWRELY-SKESIHYQNITNFPEEDNTILETGEKLM 736



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQP-HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+E   + T   Y + +P H+G A +    D+L R  R+ G +VLF  G D +G  + +
Sbjct: 37  TEKEIFSLDTPPPYTSGRPWHLGAAAQYSKIDILGRSQRMLGKEVLFPVGMDRNGIPVER 96

Query: 61  AAQNAG------VTTKVFVDQNSR-------NFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +          + + F+               D+      S D  +  RT    +   
Sbjct: 97  YTEKKNGISIKDTSREEFIKLCKESLDELEGEMLDILKSFSYSGDFKNVYRTDSASYRAL 156

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +  + ++  KG I +G     Y +       D E+  
Sbjct: 157 TQSTFIEMWKKGMIIRGTRPSNYCIDCGTTIADAEIEY 194


>gi|78046846|ref|YP_363021.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84029578|sp|Q3BW42|SYI_XANC5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78035276|emb|CAJ22921.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 943

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLP-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLRHLVALDQMVLLDRWIVHRAHALQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKP 495
             +   +   A +++  L     +N  F +    L P
Sbjct: 777 RWIAPVLSFTAEELWSYLPGQHVDNVLFATWYDGLAP 813



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAQFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|73972292|ref|XP_860096.1| PREDICTED: similar to Valyl-tRNA synthetase 2 (Valine--tRNA ligase
           2) (ValRS 2) isoform 2 [Canis familiaris]
          Length = 844

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 120/404 (29%), Gaps = 57/404 (14%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++    N   W      ++        +     + P    P ER            
Sbjct: 293 HQRTWHTWMDNIRDWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDERYWVSGRSKAEAR 352

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 353 EKAAKEFGVSSDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 410

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 411 HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 470

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L    + G+D   D + 
Sbjct: 471 QGLHDQLLNSNLDPSEVEKAKDGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 530

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +     +   G  +  D  I S  +  ++   +
Sbjct: 531 ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSEPGGHESLVDRWIRSRLTEAVRLSNQ 588

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 589 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGMDHVVAECARQTLYTCLDVGLRL 647

Query: 462 LQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           L  F+P +  ++F  L      R  Q+      P   +    +P
Sbjct: 648 LSPFMPFVTEELFQRLP----RRTLQA-----PPSLCVTPYPEP 682


>gi|255522165|ref|ZP_05389402.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 803

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 79/455 (17%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 341 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 401 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 461 GESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPKNSEAIADKEKLAEW 520

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 521 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 581 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 631

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 632 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 688

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------- 478
                             T+    VE       LL    P LA ++++IL          
Sbjct: 689 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTETISYVA 729

Query: 479 ---------VADENRCFQSLDQRLKPGFMLHKTFD 504
                    V DE      ++ ++K    + K+ +
Sbjct: 730 WPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLE 764


>gi|73972294|ref|XP_860130.1| PREDICTED: similar to Valyl-tRNA synthetase 2 (Valine--tRNA ligase 2)
            (ValRS 2) (G7a protein) isoform 3 [Canis familiaris]
          Length = 1257

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 122/407 (29%), Gaps = 60/407 (14%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        + +         L  +         +S  
Sbjct: 703  HQRTWHTWMDNIRDWCISRQLWWGHRIPAYFVTAEGPPWHSLHLWQDPDERYWVSGRSKA 762

Query: 205  KDLSLSRKTF---DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
            +    + K F      I +  D   ++  W  +     +  G+ +  +   + F+P  L 
Sbjct: 763  EAREKAAKEFGVSSDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLL 820

Query: 262  VIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE- 318
              G DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI  
Sbjct: 821  ETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHG 880

Query: 319  ------------------------------------EVGVDALRYFLVREIACGKDGFYD 342
                                                E G DALR+ L    + G+D   D
Sbjct: 881  VSLQGLHDQLLNSNLDPSEVEKAKDGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLD 940

Query: 343  KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQE 400
             + +         N + N    ++  + K +     +   G  +  D  I S  +  ++ 
Sbjct: 941  VNRILG--YRHFCNKLWNATKFALRGLGKGFVPSATSEPGGHESLVDRWIRSRLTEAVRL 998

Query: 401  IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
              +  Q            S       D Y +  KP  L   +   A          +   
Sbjct: 999  SNQGFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGMDHVVAECARQTLYTCLDVG 1057

Query: 459  AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
              LL  F+P +  ++F  L      R  Q+      P   +    +P
Sbjct: 1058 LRLLSPFMPFVTEELFQRLP----RRTLQA-----PPSLCVTPYPEP 1095



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
              +                  + ++           L  S D + R   T + +     
Sbjct: 397 WREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 455

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 TEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|288923209|ref|ZP_06417351.1| isoleucyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288345445|gb|EFC79832.1| isoleucyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 1123

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 121/417 (29%), Gaps = 42/417 (10%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T    H                Y    +    L  E    D    +  DG+Y       V
Sbjct: 436 THSYPHCWRCHTPLIYYPLPSWYIRTTAVRDRLLAENARTDWHPGRIRDGRYGEWLRGNV 495

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            W       +  +           SH   +  +   + +     SGL             
Sbjct: 496 DWALSRN-RYWGTPLPIWRCEADPSHLTCVGSLGELSALAGEDHSGLDPHRPFVDDVTVP 554

Query: 218 IKIPDDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
               D        ++ VW D+        G          + +PA       D     F+
Sbjct: 555 CPSCDATARRVPEVIDVWYDSGAMPFAQWGAPHRNAEEFTQHYPAQYICEAIDQTRGWFY 614

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            +     L+         +     +   G K+SK LGNV+DP ++ E+ G DA+R+ ++ 
Sbjct: 615 TLMAIGTLVFDRSSYETVLCLGLLLDADGRKMSKHLGNVLDPFDLFEQHGADAVRWLMLA 674

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI---------------------- 369
             +   D     + ++  V   L     N  S                            
Sbjct: 675 GGSPWSDRRVGHEAIEDIVRKILL-TYWNTASFFALYAGAAGWRPTATDGAGDGTAAPAA 733

Query: 370 ----LKDYDGMIPTPGAFTE----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
               + D  G  P+           D   LS  +  + E+ + +++    RA  ++   V
Sbjct: 734 DPAEVADLAGAAPSAADLPARRPVLDRWALSELADTVAEVDQALEHFDSLRAGRRIARFV 793

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            ++  ++  +        +P+  +T        +  L  ++  F P L + ++  LF
Sbjct: 794 DDLSNWYVRRSRRRFWAGDPNALAT----LYTCLDGLTRVMSPFTPFLTDWLWSRLF 846



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 13  IAYPNAQP--HIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA----- 65
               N +P  H  H    +  D+  R+  + G  V    G D HG  +  A +       
Sbjct: 73  PPTANGRPGAH--HVEARVFKDLFPRYRTMKGYHVPRRAGWDCHGLPVELAVEKELGFTS 130

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWK 111
                           +  V ++  +F  M + +   +  D   RT +  + ++     K
Sbjct: 131 KGDIEDYGIAEFNAKCRESVLRHVADFSAMTERMGYWVDLDTAYRTMDTEYIESVWWSLK 190

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           +I DKG + +      Y  RDE   +D EV +G 
Sbjct: 191 QIFDKGLLVEDYRVTPYCPRDETPLSDHEVSQGY 224


>gi|257457078|ref|ZP_05622256.1| leucyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445552|gb|EEV20617.1| leucyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 856

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 7/222 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++ YI     YP+    H+GH       D+  R+ R++G  VL   G D  G      A 
Sbjct: 34  KRAYILDMFPYPSGAGLHVGHPEGYTATDIYCRYLRMNGFAVLHPMGFDSFGLPAENYAI 93

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   ++   +N   FR        SY  D  + T++  ++   + ++ ++  +G  Y+
Sbjct: 94  KTGTHPRITTKENIDTFRKQIQAFGFSYDWDRELATSDVDYYRWTQWIFLQLYKRGLAYE 153

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         ++EV +G            V       +  +++AY ++LL   +
Sbjct: 154 TEAPINWCPSCLTGLANEEVKEG----CCERCGTQVVRKNVRQWMLKITAYAERLLEDLD 209

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
                      +   I        D  L+       I +   
Sbjct: 210 ELDWPQSVKVMQRNWIGKSTGAEIDFHLAAPHEGEKITVYTT 251



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 104/320 (32%), Gaps = 77/320 (24%)

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVI 263
            ++      G     +    M  W  +   YL               K  +W P +L++ 
Sbjct: 489 WVNTVCPHCGSPACRETN-TMPQWAGSCWYYLRYLDPHNAHSFCAKEKEAYWMPVNLYIG 547

Query: 264 GKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE--------- 301
           G +    H +Y   +         +    P  +      + S  +    G          
Sbjct: 548 GAEHAVLHLLYARFWHKVLYDLGLVHTKEPFMRLVNQGMITSFAYQRSNGSLVPIDEVIQ 607

Query: 302 --------------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                               K+SKSL NVI+P E+I + G D+ R + +          +
Sbjct: 608 TGEESFEEKSTGEKLKRVVAKMSKSLKNVINPDEMIAQYGADSCRMYEMFMGPLDMSKPW 667

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  GL          GI   + +   +  K+   + P     T     I  + ++ +++I
Sbjct: 668 NTQGLI---------GIFRFLEKIWGIAGKEL-TLCPVNDTSTPEHAEITKLLNKTIKKI 717

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+  +   + A++Q++  ++ + +Y                 ++V     E       L
Sbjct: 718 TEDTASLNFNTAISQMMIFINALGKY-----------------NSVPRFAWEAF---IKL 757

Query: 462 LQAFVPKLANKIFDILFVAD 481
           L  + P LA ++++ L   +
Sbjct: 758 LAPYAPHLAEELWEKLGYTE 777


>gi|46907891|ref|YP_014280.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b F2365]
 gi|226224263|ref|YP_002758370.1| leucyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|60390717|sp|Q71Z07|SYL_LISMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|259511547|sp|C1KVV9|SYL_LISMC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46881160|gb|AAT04457.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225876725|emb|CAS05434.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328474001|gb|EGF44814.1| leucyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 803

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 79/455 (17%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 341 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 401 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 461 GESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNSEAIADKEKLAEW 520

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 521 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 581 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 631

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 632 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 688

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------- 478
                             T+    VE       LL    P LA ++++IL          
Sbjct: 689 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTETISYVA 729

Query: 479 ---------VADENRCFQSLDQRLKPGFMLHKTFD 504
                    V DE      ++ ++K    + K+ +
Sbjct: 730 WPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLE 764


>gi|225561918|gb|EEH10198.1| valyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1051

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 99/303 (32%), Gaps = 47/303 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
             +  DP  ++  W  +     +T G+  N      K +P  +   G DIL F    +  
Sbjct: 563 FTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFEKLYPTSVLETGWDILFFWVARMIM 620

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------ 317
               ++  +P  +          +G K+SKSLGNVI+P++VI                  
Sbjct: 621 LGLKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVINPVDVIEGIELQVLHDKLKHGNLA 680

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ LV     G D  +D   +         N I
Sbjct: 681 EKEIAAATRYQKKAFPKGIPECGTDALRFALVSYSTGGGDINFDIQVI--HGYRRFCNKI 738

Query: 359 GNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  +  + +D+         G  + S+  IL   +   +   E+++++    A + 
Sbjct: 739 YQATRYVLGKLGEDFKPQATPAKTGKESLSERWILHKFNNAAKLANESLESRDFSVASSV 798

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D + +  K         +   +        +     L+   +P +  +++
Sbjct: 799 LYQYWYSQLCDVFIENSKSLLQADVPAEVQHSAKETLYTALEGALTLIHPIMPFVTEELW 858

Query: 475 DIL 477
             L
Sbjct: 859 QRL 861



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K   K  I           H+GHA    + D + R+ R+ G  VL+  G D  G     
Sbjct: 123 VKPEGKFVIPIPPPNVTGDLHMGHALTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 182

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 183 VVEKILWKTEGKTRHDVGREVMTNMIWDWTYKYHDSITSTLKRLGGSFDWTREAFTMDEN 242

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 243 LSAAVTETFVRLHEEGTIYRANRLVNWC 270


>gi|72390541|ref|XP_845565.1| valyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358810|gb|AAX79263.1| valyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70802100|gb|AAZ12006.1| valyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 975

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 77/469 (16%), Positives = 137/469 (29%), Gaps = 106/469 (22%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           H T    +K +       +          ++     + V         +   + V+ +  
Sbjct: 328 HVTTEGPFKGMHRFDCRREIVKE-----LEKMGLLREVVPYEYRVGRCSRTGDIVEPLLM 382

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-- 220
             +F   +    K +    ++   + P   +     +++  +K   +SR+   WG +I  
Sbjct: 383 PQWFVDCTEMARKSVEAVRNNELRLYPPTHQVVWYHWLE-NIKPWCVSRQ-LWWGHRIPA 440

Query: 221 ----------PDDPQ---------------------------------YIMYVWIDALTN 237
                      +DP                                   ++  W  +   
Sbjct: 441 YKCTGAVPSTHEDPWVVARNLEEAKAKAKEKFNLSDAEVRELVLEQDSDVLDTWFSSAMW 500

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
             +T G+         +F+P  L   G DIL F    +   +   +  LP  +       
Sbjct: 501 PFSTMGWPAETG-DMQRFFPGSLMETGHDILFFWVARMVMTSLHFTGKLPFSEVFLHAMV 559

Query: 296 ILHKGEKISKSLGNVIDPIEVI-------------------------------------E 318
               GEK+SKS GNVIDP+ +I                                      
Sbjct: 560 RDKNGEKMSKSKGNVIDPLFIISGVSLEALHDTVRSGNLDEKEVSRALKLQRETFPNGIP 619

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGM- 376
           E G DALR+ L+     G++   D D +       L N + N V   +   L +DY    
Sbjct: 620 ECGSDALRFGLLSYTQSGRNVNLDIDRVVA--YRQLCNKLWNAVRFVLYHALGEDYKPKA 677

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLV--SEVDRYF 428
                    +       ILS     ++E              A   V         D Y 
Sbjct: 678 TLVNSQKVASLPLECRWILSRLDVAVEECTRGFSEGTYDFALATNAVYRFWLYELCDVYL 737

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  KP    +   ++   V  V + V+     LL   +P L  +++  L
Sbjct: 738 ELTKP--TIQAGGEKKVIVQDVLLHVVEVALRLLHPMMPFLTEELWHYL 784



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 19/156 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I +         HIGHA    + D L RFHR+ G D L+  GTD  G       + 
Sbjct: 44  RSFVIVSPPPNVTGHLHIGHALTGAVQDALIRFHRMKGDDTLYLPGTDHAGIATQVVVEK 103

Query: 65  AGVTT---------------KVFVDQ--NSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                 +V+V +  +          + +S D      T +++    
Sbjct: 104 RLMKESGKSRHDVGREEFLKQVWVFKENHCGVITRQLRRIGLSLDWSRERFTMDEQCAKA 163

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               + K+ + G IY+      +    ++  +D EV
Sbjct: 164 VVEGFVKLHEDGLIYRATRLINWCCSLQSAISDLEV 199


>gi|330970084|gb|EGH70150.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 499

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 70/423 (16%), Positives = 135/423 (31%), Gaps = 46/423 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G + +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R  +     +    ++  + D G     D
Sbjct: 63  LGVDPVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALRDAGAIECRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-------------------YYNAQHNPVQW 159
             +           EA+   +  Y GA+                            P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTDLRCKLCSQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L                    +      L D  ++R   D G+ 
Sbjct: 183 KNVHRAFLKLAGFKAQLRDRLLGQSWRKPLDSW----LRDSLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADRVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L + +    ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLTALHDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 +G +            LA           +++    +           +D  +L
Sbjct: 358 IAPEESEGDFRLAQF-------LAWRAEVFSEFFPALLDAGSNRDDHWWSGLCGADAGLL 410

Query: 392 SVC 394
              
Sbjct: 411 EAL 413


>gi|297271343|ref|XP_001107299.2| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 1152

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 98/276 (35%), Gaps = 11/276 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 413 VFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFFIP 472

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP+ +I++ G DALR +L+       ++  + +
Sbjct: 473 PFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENLRFKE 532

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           +G++  +   L    N    L+   + +  ++    +       ES    D  ILS    
Sbjct: 533 EGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILSFMQS 592

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++      M    ++  + +++  V    + Y    +     +   +     L     V+
Sbjct: 593 LIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVL 652

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             L  L+  + P L   ++  L V  +    Q  D 
Sbjct: 653 LSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDT 688


>gi|291570477|dbj|BAI92749.1| isoleucyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 964

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 79/498 (15%), Positives = 145/498 (29%), Gaps = 55/498 (11%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT--------KVFVDQNSRNFRDMADVLD 88
           +       +   +  DE+G    +A + AG+             + +     ++      
Sbjct: 354 YIVGQRYGLPILSPVDENGDFTEEAGEFAGLNVLKDANSAIIEALQEAGSLIKEEPYQHK 413

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKI--SDKGDIYKGCYSGWYSLRDEAYYND---DEVYK 143
             YD   RT +          +  +       +       W   + E        D    
Sbjct: 414 YPYDW--RTKKPTIFRATEQWFASVEGFRSQALEAIKQVQWIPPQGENRITPMVSDRSDW 471

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
               Q       PV + EE G         + +                  E++      
Sbjct: 472 CISRQRSWGVPIPVFYEEETGEPLLNEETINHVKGIIAERGTDAWWELSVEELLPESYVN 531

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
                          K        M VW D+ ++      +           +PAD+++ 
Sbjct: 532 NG-------------KKYRKGTDTMDVWFDSGSS------WAAVAKQRPELAYPADIYLE 572

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP-------- 313
           G D     F +    +       P    +     +   G K+SKS+GNV+DP        
Sbjct: 573 GSDQHRGWFQSSLLTSVANYGIAPYKTVLTHGFVLDENGRKMSKSIGNVVDPAVVINGGK 632

Query: 314 -IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +     G D LR ++   +    D    K+ LK+   +D+   I N   R +   L D
Sbjct: 633 NQQQEPAYGADILRLWV-SSVDYSADVPLGKNILKQ--MSDVYRKIRNTA-RFLLGNLHD 688

Query: 373 YDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
           +D            E D  +L   + V  E+++  +     R    V +   V   + Y 
Sbjct: 689 FDPAKDAIAYQDLPELDRYMLHRMTEVFAEVKDAFETYQFFRFFQTVQNFCVVDLSNFYL 748

Query: 429 DAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-F 486
           D  K    +   N  R  +   V    +  LA  +   +   A  I+  +  +      F
Sbjct: 749 DIAKDRLYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNMPYSTPYLSVF 808

Query: 487 QSLDQRLKPGFMLHKTFD 504
           +S   RL   +   +  +
Sbjct: 809 ESGWVRLDETWKKPELAE 826



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           ++  I     Y N Q HIGHA   I+ D++ R+  L G  V +  G D HG  I      
Sbjct: 51  DRFVIHDGPPYANGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELKVLQ 110

Query: 60  --KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
             K ++   +T        + F  +     +       +   +D+   T    +      
Sbjct: 111 QMKQSEREQLTPMTLREKARDFALKTVEEQKTQFQRYGVWGDWDNPYLTLTPEYEAAQIA 170

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++  KG IY+G     +S   +    + E+  
Sbjct: 171 VFAQMVLKGYIYRGLKPVHWSPSSKTALAEAELEY 205


>gi|313623007|gb|EFR93300.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 921

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 108/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  +       E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNSVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  GRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|154295520|ref|XP_001548195.1| hypothetical protein BC1G_13385 [Botryotinia fuckeliana B05.10]
 gi|150844011|gb|EDN19204.1| hypothetical protein BC1G_13385 [Botryotinia fuckeliana B05.10]
          Length = 1069

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 98/264 (37%), Gaps = 11/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         + +P D    G D     F+ +      L  
Sbjct: 517 EEVFDCWFESGSMPYASQHYPFENKDKFEQSFPGDFIAEGLDQTRGWFYTLLVLGTHLFG 576

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    V +   +   G+K+SK L N  DP  V+++ G DALR +L+       +    
Sbjct: 577 VSPFKNCVVNGIVLAEDGKKMSKRLKNYPDPGIVMDKYGSDALRLYLINSPVVRAEPLRF 636

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMI-----LKDYDGMIPTPGAFTE---SDESILSVC 394
           K+   K V + +   + N        +     +++ D +       T     D  IL+ C
Sbjct: 637 KEAGVKEVVSKVLLPLWNSYKFFEGQVALLKKMENVDYVFDPTAEATNTNVMDRWILASC 696

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + + M    ++  + +++ L+    + Y    +     ++  +     L    E
Sbjct: 697 QSLLKFVNQEMAGYRLYTVVPRLLDLIDNTTNWYIRFNRRRLKGESGLNDTKHALNTLFE 756

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  L   L  F P L + I+  L
Sbjct: 757 VLFTLTRGLAPFTPFLTDNIYQRL 780



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 28  EGKPRYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGLPIEHE 87

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  +R   D L   I +D+  +T + + 
Sbjct: 88  IDKKFGISGKDAVMKMGLAKYNEECRAIVMRYSSEWRTTIDRLGRWIDFDNDYKTMDPKF 147

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++ +I  KG +Y+
Sbjct: 148 MESEWWVFSEIFKKGSVYQ 166


>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 962

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 68/453 (15%), Positives = 145/453 (32%), Gaps = 34/453 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAG---VTTKVFVDQNSRNFRDMADVLDI--SY 91
           F       +      D+ G   ++A    G         + +       +  +  I  SY
Sbjct: 374 FLVGKQYGLEVLCPVDDKGVLTSEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSY 433

Query: 92  DDFIRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
               RT +          +   +    +            +  +   +N           
Sbjct: 434 PHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCIS 493

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
              A   P+     E     ++      ++               N        GL    
Sbjct: 494 RQRAWGVPIPVFYAENGDPIITDETINHVADLFRENG-------SNVWFEREAKGLLPEG 546

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            +  +   G         IM VW D+ +++             +    PADL++ G D  
Sbjct: 547 FTHPSSPNG--EFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQY 598

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR
Sbjct: 599 RGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILR 658

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFT 384
            ++   +    D     D LK+   A++   I N   R +   L D++            
Sbjct: 659 LWV-SSVDYQSDVRISDDILKQV--AEVYRKIRNTF-RFLLGNLADFNPSQDAVAKAELR 714

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNP 441
           E D  +L   + ++ +++E  +          + +   +     Y D  K    ++  N 
Sbjct: 715 EVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAENH 774

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                +  V  +V+  L  L+   +P  A++++
Sbjct: 775 HDRRAIQTVLYDVLVALTKLVTPILPHTADEVW 807



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 86  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 145

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D    T E  +     
Sbjct: 146 LTNKGVKRKEMTVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDRPYITLEPAYEAQQI 205

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 206 KVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEIEYNDKKSASIYVAFPV 255


>gi|161507942|ref|YP_001577906.1| leucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260103261|ref|ZP_05753498.1| leucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|229470715|sp|A8YWU4|SYL_LACH4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160348931|gb|ABX27605.1| Leucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|260082930|gb|EEW67050.1| leucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328464566|gb|EGF35935.1| leucyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 804

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V    N  NF+   + L  SY  D  I T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPAVVTKNNIANFKRQLNKLGFSYDWDREITTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSVG 226



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 78/464 (16%), Positives = 147/464 (31%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  D+S   F     +            +
Sbjct: 329 YGTGAVMAVPAHDDRDYAFAKKFDLPINQVLEGGDLSKAAF----TEDGPHINSEFLNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + K    K           E   N          Q Y  +  PV   E+           
Sbjct: 385 NIKDAKKKMVDWLEEHNCGEKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGTTSLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                         LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDEMGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      ++    D    K W P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   EK+SKS GNV++P EVI+E G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   IP      ++D  +  V +  +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+      + A++Q++  ++                    +A T+     E +     
Sbjct: 664 VTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR---EYVEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|116512741|ref|YP_811648.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108395|gb|ABJ73535.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 932

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 108/279 (38%), Gaps = 29/279 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSS------WNGVLNERDYLSFPADLYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KG K+SKS+GN I P +V ++ G D LR ++        D
Sbjct: 570 AVNGVAPYKAVLSQGFVLDGKGRKMSKSIGNTIVPKDVTKKFGADILRLWVASIDTE-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +       + +   +  ++  ++ +     P             D+ +L  
Sbjct: 629 VRVSMDILSQ------VSEVYRKIRNTLRFLIANTSDFNPKEDGIDFAELRPVDKYMLVK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK--TNPDR--ASTV 447
            + ++++I +   N         +I+ +       Y D  K     +   +P+R    TV
Sbjct: 683 FNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTV 742

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           +YV   +++ L  +L   +P  A + +  L    EN  +
Sbjct: 743 MYV---ILKDLVKVLVPILPHTAEETWTYLEHEPENFAY 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPSFILHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG+  K             +  +     R     L +   +D    T    +     
Sbjct: 105 LAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEY 200


>gi|308048500|ref|YP_003912066.1| isoleucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630690|gb|ADN74992.1| Isoleucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 940

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 127/373 (34%), Gaps = 38/373 (10%)

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKD 206
             + + VQW+ + G     +  +++          + +P    +    + +      L +
Sbjct: 440 QQEIDQVQWIPDWGQARIQTMVENRPDWCISRQRTWGVPIALFVHNETQALHPRSVELME 499

Query: 207 LSLSRKTFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDG 250
           L   R     GI+   D                    + VW D+   + +          
Sbjct: 500 LVAQRVE-AEGIQAWWDLDAAELLGDEAEHYSKVQDTLDVWFDSGVTHHSVVD----ARE 554

Query: 251 SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLG 308
                 P DL++ G D     F +    +  +    P  + +     +  KG K+SKSLG
Sbjct: 555 EFHGHSP-DLYLEGSDQHRGWFMSSLISSVAMKDAAPYKQVLTHGFTVDGKGRKMSKSLG 613

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NV+ P +V+ ++G D LR ++      G+    D+     + +AD    I N  SR +  
Sbjct: 614 NVMSPQQVVNKLGADILRLWVASTDYTGEMTVSDE---ILKRSADAYRRIRNT-SRFLLA 669

Query: 369 ILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
            +  ++    +         D  I++    + +EI    ++   H+   +++   S    
Sbjct: 670 NMSGFNPATDMVALEEMVALDRWIVARAHALQEEIVAAYESYNFHQVSQKLMHFCSIELG 729

Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             Y D  K  +   K +     +       +   +   +   +   A++I+  L    E 
Sbjct: 730 SFYLDIIKDRQYTAKGDSLARRSCQSALYLITEAMVRWMAPVMSFTADEIWQALPGEREP 789

Query: 484 RCF-QSLDQRLKP 495
             F Q     L P
Sbjct: 790 FVFTQVWFDGLAP 802



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    + 
Sbjct: 49  KPFILHDGPPYANGDIHIGHSVNKILKDIIIKAKTLSGFDAPYIPGWDCHGLPIELKVEQ 108

Query: 65  AGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             + +        +     L +   +D    T +          
Sbjct: 109 KVGKPGQKVSAAEFRQKCREYAKTQVEGQKADFIRLGVLGEWDKPYLTMDFGTEANIIRS 168

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI D G ++KG     +     +   + EV  
Sbjct: 169 LAKIIDNGHLHKGAKPVHWCTDCGSALAEAEVEY 202


>gi|284053011|ref|ZP_06383221.1| isoleucyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 922

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 79/498 (15%), Positives = 145/498 (29%), Gaps = 55/498 (11%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT--------KVFVDQNSRNFRDMADVLD 88
           +       +   +  DE+G    +A + AG+             + +     ++      
Sbjct: 354 YIVGQRYGLPILSPVDENGDFTEEAGEFAGLNVLKDANSAIIEALQEAGSLIKEEPYQHK 413

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKI--SDKGDIYKGCYSGWYSLRDEAYYND---DEVYK 143
             YD   RT +          +  +       +       W   + E        D    
Sbjct: 414 YPYDW--RTKKPTIFRATEQWFASVEGFRSQALEAIKQVQWIPPQGENRITPMVSDRSDW 471

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
               Q       PV + EE G         + +                  E++      
Sbjct: 472 CISRQRSWGVPIPVFYEEETGEPLLNEETINHVKGIIAERGTDAWWELSVEELLPESYVN 531

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
                          K        M VW D+ ++      +           +PAD+++ 
Sbjct: 532 NG-------------KKYRKGTDTMDVWFDSGSS------WAAVAKQRPELAYPADIYLE 572

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP-------- 313
           G D     F +    +       P    +     +   G K+SKS+GNV+DP        
Sbjct: 573 GSDQHRGWFQSSLLTSVANYGIAPYKTVLTHGFVLDENGRKMSKSIGNVVDPAVVINGGK 632

Query: 314 -IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
             +     G D LR ++   +    D    K+ LK+   +D+   I N   R +   L D
Sbjct: 633 NQQQEPAYGADILRLWV-SSVDYSADVPLGKNILKQ--MSDVYRKIRNTA-RFLLGNLHD 688

Query: 373 YDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
           +D            E D  +L   + V  E+++  +     R    V +   V   + Y 
Sbjct: 689 FDPAKDAIAYQDLPELDRYMLHRMTEVFAEVKDAFETYQFFRFFQTVQNFCVVDLSNFYL 748

Query: 429 DAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC-F 486
           D  K    +   N  R  +   V    +  LA  +   +   A  I+  +  +      F
Sbjct: 749 DIAKDRLYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNMPYSTPYLSVF 808

Query: 487 QSLDQRLKPGFMLHKTFD 504
           +S   RL   +   +  +
Sbjct: 809 ESGWVRLDETWKKPELAE 826



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           ++  I     Y N Q HIGHA   I+ D++ R+  L G  V +  G D HG  I      
Sbjct: 51  DRFVIHDGPPYANGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELKVLQ 110

Query: 60  --KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
             K ++   +T        + F  +     +       +   +D+   T    +      
Sbjct: 111 QMKQSEREQLTPMTLREKARDFALKTVEEQKTQFQRYGVWGDWDNPYLTLTPEYEAAQIA 170

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ ++  KG IY+G     +S   +    + E+  
Sbjct: 171 VFAQMVLKGYIYRGLKPVHWSPSSKTALAEAELEY 205


>gi|184153233|ref|YP_001841574.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|254782415|sp|B2G6L2|SYI_LACRJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|183224577|dbj|BAG25094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 931

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 107/279 (38%), Gaps = 23/279 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 519 FTKETDIMDVWFDSGSSHQGVLAER------DYLTYPADLYLEGSDQYRGWFNSSLITSV 572

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + S + P  + V     +  +G K+SKS GNVIDP +V++++G + +R +++       D
Sbjct: 573 VCSGHAPYKEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVMSADTSA-D 631

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                   ++   A         +  +   +L +     P             D+ +L  
Sbjct: 632 VRVSMGTFQQISEA------YRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVK 685

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +  L+ +RE+  N     A   +I+ V       Y +  K    ++  N +   ++  V
Sbjct: 686 LNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTV 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +++  L  LL   +P    +++  +   ++      +
Sbjct: 746 FYDILLTLVKLLTPILPHTTEEVWSYMNEPEDFVQLTEI 784



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +G   K             +  +     R     L +S  +D    T +K       
Sbjct: 105 LTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ + + KG +Y+     ++S   E+   + EV   
Sbjct: 165 RVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 201


>gi|188992578|ref|YP_001904588.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|254782455|sp|B0RY28|SYI_XANCB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167734338|emb|CAP52548.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 943

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 93/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   + T           +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHETVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLTGVAMDKVA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P E++  +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQEIMRTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDDMVLLDRWIVHRAHELQEKIT 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQGLLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKP 495
             +   +   A +++  L      N  F +    L P
Sbjct: 777 RWIAPVLSFTAEELWAYLPGEHSGNVLFATWYDGLAP 813



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKFGKVGVKLDAAQFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVIDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|16804058|ref|NP_465543.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501180|ref|ZP_03669487.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508283|sp|Q8Y5N8|SYI_LISMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16411472|emb|CAD00097.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 921

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  GRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|293596213|ref|ZP_05229277.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|293593511|gb|EFG01272.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 841

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 185

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 186 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 241

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 242 DLDLVDWPENIKDMQRNWIGRSE 264



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 79/455 (17%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 379 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 438

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 439 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 498

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 499 GESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPKNSEAIADKEKLAEW 558

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 559 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 618

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 619 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 669

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 670 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 726

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------- 478
                             T+    VE       LL    P LA ++++IL          
Sbjct: 727 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTETISYVA 767

Query: 479 ---------VADENRCFQSLDQRLKPGFMLHKTFD 504
                    V DE      ++ ++K    + K+ +
Sbjct: 768 WPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLE 802


>gi|47093772|ref|ZP_00231521.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258611712|ref|ZP_05241635.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293596862|ref|ZP_05264962.2| leucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|47017859|gb|EAL08643.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605593|gb|EEW18201.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583156|gb|EFF95188.1| leucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
          Length = 841

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 66  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 125

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 126 YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 185

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 186 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 241

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 242 DLDLVDWPENIKDMQRNWIGRSE 264



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 79/455 (17%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 379 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 438

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 439 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 498

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 499 GESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNSEAIADKEKLAEW 558

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 559 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 618

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 619 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 669

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 670 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 726

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------- 478
                             T+    VE       LL    P LA ++++IL          
Sbjct: 727 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTETISYVA 767

Query: 479 ---------VADENRCFQSLDQRLKPGFMLHKTFD 504
                    V DE      ++ ++K    + K+ +
Sbjct: 768 WPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLE 802


>gi|223986118|ref|ZP_03636141.1| hypothetical protein HOLDEFILI_03449 [Holdemania filiformis DSM
           12042]
 gi|223961923|gb|EEF66412.1| hypothetical protein HOLDEFILI_03449 [Holdemania filiformis DSM
           12042]
          Length = 803

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 73/219 (33%), Gaps = 7/219 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 33  SKPKFYALDMFPYPSGVGLHAGHPEGYTATDIVSRMKRMQGYNVLHPMGFDSFGLPAEQY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N   F+    +L  SY  D  + T +   +   + ++K++ + G  
Sbjct: 93  AIQTGNNPNGFTLKNIETFKRQLKMLGFSYDWDREVSTCDPSFYKWTQWIFKQLFESGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         +DEV  G           PV       +   +  Y ++LL  
Sbjct: 153 KCVEMPVNWCEELGTVLANDEVIDGKS----ERGGYPVVRKNMRQWVIDIVQYAERLLEG 208

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +         E +   I      L D  ++     + +
Sbjct: 209 LDEVDWPESTKEMQRNWIGKSIGALVDFQVAGHAEQFTV 247



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 95/280 (33%), Gaps = 46/280 (16%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+      +  D    K W P DL++ G +    H +Y   +         +   
Sbjct: 500 WYFLRYIDPHNEKELADPELLKHWMPVDLYIGGPEHAVGHLLYSRMWNNFLYDKGVVPVK 559

Query: 284 LPLPKKVFSHGFILHKGEKISKSLG-NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V     +   G K+ K     V+DP  ++E+ G D LR + +          + 
Sbjct: 560 EPFHKLVHQGMILGSNGIKMGKRFPEYVVDPNVIVEKYGADTLRLYEMFMGPLEASKPWS 619

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G+               + R   ++++  + +   P         +       ++++ 
Sbjct: 620 EKGVDASR---------KWLERVWRLVMEQPEKVTDEPTP------QLDYAYHFTVKKVT 664

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           E+++    + A++Q++  V+E  R                       +  E++     LL
Sbjct: 665 EDIETLNFNTAISQMMIFVNECYR--------------------ADKINREMLLGFIKLL 704

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKT 502
             F P L  +++  L    E   ++S     +   + ++T
Sbjct: 705 SPFAPHLGEEMYQSL-TGAETIAYESWPTYDEAKLVKNET 743


>gi|197120433|ref|YP_002132384.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170282|gb|ACG71255.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 946

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 84/490 (17%), Positives = 155/490 (31%), Gaps = 58/490 (11%)

Query: 33  VLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--- 89
           V  R+    GL+VL     D  G+   +A + AG   K   + N     D+     +   
Sbjct: 375 VGLRY----GLEVLNP--VDGAGRFTERAGKYAG---KKIFEANPEIVADLHASGHLLSD 425

Query: 90  -------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS-----GWYSLRDEAYYN 137
                  SY    R             +  +                        E  +N
Sbjct: 426 PKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKATLAEIDRVRWIPHWGRERIHN 485

Query: 138 --DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             ++        Q       PV + E            +++ + +E+             
Sbjct: 486 MIENRPDWCVSRQRTWGVPIPVFYCEGCNEALLSPPVMERVAAAFEAEG----------- 534

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           + ++ +    D +        G       Q I+ VW D+  ++             +   
Sbjct: 535 MEAWYRHPPADFTAGAACPKCGKTEFRREQDILDVWWDSGVSWAAVIER-------EGLE 587

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
            P DL++ G D     FH+    +  L    P  + V +HGFIL + G+ +SKS GN I+
Sbjct: 588 LPVDLYLEGSDQHRGWFHSSLLTSMALRGAAPY-RAVLTHGFILDQHGKAMSKSAGNGIE 646

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E+I++ G D LR ++                      A+    I N +  ++   L  
Sbjct: 647 PSEIIKKYGADILRLWVSASDYR---DDIGLGDQILAGLAEGYRKIRNTIRYALG-ALDG 702

Query: 373 YDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
           +D              D   L+  +   +++ +  ++   H A    +    V     YF
Sbjct: 703 FDPARDAVPEAELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYF 762

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCF 486
           D  K      K +  +  +       + + L  LL   +   A++ +  L     E+   
Sbjct: 763 DVIKDRLYTWKADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWTYLPGRPTESVWL 822

Query: 487 QSLDQRLKPG 496
             L +R +P 
Sbjct: 823 AGLPRRARPA 832



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   HIGHA   I+ DV+ ++  L+G    +  G D HG  I      
Sbjct: 51  KRFVLHDGPPYANGDIHIGHALNKILKDVVVKYRNLNGEVADYIPGWDCHGLPIELKVDK 110

Query: 65  AGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                K              +  +     R+    L +   ++    T  + +       
Sbjct: 111 ELGPKKRELDRPAIIEACRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRT 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + + ++KG +Y+G    ++ + D     + EV  
Sbjct: 171 FARAAEKGFLYRGKKPVYWCITDRTALAEAEVEY 204


>gi|313618002|gb|EFR90151.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
          Length = 921

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNGVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  GRKTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|25010601|ref|NP_734996.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457393|sp|Q8E6N1|SYI_STRA3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|23094954|emb|CAD46176.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 930

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 29/277 (10%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           + +    IM VW D+ ++      +    +  +   +PADL++ G D     F++    +
Sbjct: 517 LFEKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    
Sbjct: 571 VAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILS 392
           D     D LK+         I   +  ++  ++ +     P   A         D  +  
Sbjct: 630 DVRISMDILKQTSE------IYRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTI 683

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRAST 446
             ++V+  I +             V++   V     Y D  K     +        R  T
Sbjct: 684 KFNQVVDTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQT 743

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V Y   +++ +L  LL   +P  A +I+  L   +E 
Sbjct: 744 VFY---DILVKLTKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTPDYEADQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|284802052|ref|YP_003413917.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995194|ref|YP_003416962.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057614|gb|ADB68555.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060661|gb|ADB71600.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 806

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    + 
Sbjct: 32  NKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ + G  
Sbjct: 92  AIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 152 YEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLDD 207

Query: 180 YESHPEFILPIERRNEVISFVK 201
            +         + +   I   +
Sbjct: 208 LDLVDWPENIKDMQRNWIGRSE 229



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 500 WYFLRYIDPKNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 559

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 560 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 619

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 620 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 668

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 669 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 708

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 709 PIAPHLAEELWEILGHTE 726


>gi|16801193|ref|NP_471461.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526006|sp|Q929Z6|SYI_LISIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16414641|emb|CAC97357.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 921

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNGVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 15/154 (9%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K YI      Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A  
Sbjct: 47  RKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIA 106

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
             GV  K             +        R     L I+ D      T    +      +
Sbjct: 107 KKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKV 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +++ KG IYKG    ++S   E+   + E+  
Sbjct: 167 FGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|258563404|ref|XP_002582447.1| isoleucyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237907954|gb|EEP82355.1| isoleucyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 1056

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 107/295 (36%), Gaps = 14/295 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + I   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 537 EEIFDCWFESGSMPYASQHYPFENADEFHASFPGDFIAEGLDQTRGWFYTLTVLGIHLFG 596

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  +++  G DALR +L+       +   +
Sbjct: 597 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDALRLYLINSPVVRAEPLRF 656

Query: 342 DKDGLKKRVNADLANGIGNLVSRS-----VSMILKDYDGMIPTPGAFTE---SDESILSV 393
            + G+K+ V   L   + N          +   +++ D +       T     D  IL+ 
Sbjct: 657 REVGVKEVVAKVLLP-LWNSYKFFDGQVVLLKKVENLDYVFDPSMEATNTNVMDRWILAS 715

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           C  +L+ + E M    ++  + +++ L+    + Y    +     +   +     L    
Sbjct: 716 CQSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLEDTKHALNTLF 775

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           EV+  L   L  F P + + I+  L +    +  Q  D R        +  + +F
Sbjct: 776 EVLYTLVRGLAPFTPFVTDTIYHRL-LPHIPKSLQGEDNRSVHFLPFPEVREELF 829



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 37/157 (23%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R+         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRKPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGHYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDD--------- 93
                                    +  V + +  +R   D L   I +D+         
Sbjct: 90  IDKSLGMSGSEAVEKLGLAEYNAKCRAIVMRYASEWRQTIDRLGRWIDFDNDYKVNYPDT 149

Query: 94  --FIR-------TTEKRHHDTCRILWKKISDKGDIYK 121
             F         T +  + ++   ++KK+ DKG +Y+
Sbjct: 150 MLFHHHATNTLKTMDTTYMESEWWIFKKLYDKGLVYR 186


>gi|45359037|ref|NP_988594.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74553693|sp|Q6LX78|SYI_METMP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|45047912|emb|CAF31030.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 1034

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 117/323 (36%), Gaps = 17/323 (5%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +   L  +  +    YE         ER NE  +         +     T   G K+   
Sbjct: 467 WGIPLPIWICEECGNYEVIGSVDELKERANEKDVDLSDIHKPAVDKITLTCSCGGKMKRT 526

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           P  ++ VW D+      + G              A     G D +   F++ +  + ++ 
Sbjct: 527 PD-VLDVWYDSGLAPYASIGSKKLKK--------AQFITEGNDQVTKWFYSQHALSAVVF 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +    K +     +   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +
Sbjct: 578 DDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRF 637

Query: 342 DKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
               + +     + N + N  + S   M+L D+           + D  ILS  + V +E
Sbjct: 638 SYSEMDE--TRSMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDEDAWILSRINTVAKE 695

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             E ++   +H     +   +       Y    +     + N  +  +       VI +L
Sbjct: 696 AVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKL 755

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++    P L+ +I+  L   D
Sbjct: 756 ISIMAPVTPHLSEEIYQNLKTED 778



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 20/157 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            + Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 37  PEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                                  K F   +  + +   + L +   +++     ++ + +
Sbjct: 97  EFNIGSKKDIETKIGTQEFINKCKEFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYME 156

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                 KK  +K  + K   SG++  R E    + EV
Sbjct: 157 MGWWTLKKAHEKELLTKDLRSGYWCPRCETSLAEHEV 193


>gi|220915135|ref|YP_002490439.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219952989|gb|ACL63373.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 946

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 84/490 (17%), Positives = 155/490 (31%), Gaps = 58/490 (11%)

Query: 33  VLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--- 89
           V  R+    GL+VL     D  G+   +A + AG   K   + N     D+     +   
Sbjct: 375 VGLRY----GLEVLNP--VDGAGRFTERAGKYAG---KKIFEANPEIVADLHASGHLLSD 425

Query: 90  -------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYS-----GWYSLRDEAYYN 137
                  SY    R             +  +                        E  +N
Sbjct: 426 PKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKATLAEIDRVRWIPHWGRERIHN 485

Query: 138 --DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
             ++        Q       PV + E            +++ + +E+             
Sbjct: 486 MIENRPDWCVSRQRTWGVPIPVFYCEGCNEALLSPPVMERVAAAFEAEG----------- 534

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           + ++ +    D +        G       Q I+ VW D+  ++             +   
Sbjct: 535 MEAWYRHPPADFTAGAACPKCGKTEFRREQDILDVWWDSGVSWAAVIER-------EGLE 587

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSLGNVID 312
            P DL++ G D     FH+    +  L    P  + V +HGFIL + G+ +SKS GN I+
Sbjct: 588 LPVDLYLEGSDQHRGWFHSSLLTSMALRGAAPY-RAVLTHGFILDQHGKAMSKSAGNGIE 646

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P E+I++ G D LR ++                      A+    I N +  ++   L  
Sbjct: 647 PSEIIKKYGADILRLWVSASDYR---DDIGLGDQILAGLAEGYRKIRNTIRYALG-ALDG 702

Query: 373 YDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
           +D              D   L+  +   +++ +  ++   H A    +    V     YF
Sbjct: 703 FDPARDAVPEAELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYF 762

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCF 486
           D  K      K +  +  +       + + L  LL   +   A++ +  L     E+   
Sbjct: 763 DVIKDRLYTWKADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWTYLPGRPTESVWL 822

Query: 487 QSLDQRLKPG 496
             L +R +P 
Sbjct: 823 AGLPRRARPA 832



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   HIGHA   I+ DV+ ++  L+G    +  G D HG  I      
Sbjct: 51  KRFVLHDGPPYANGDIHIGHALNKILKDVVVKYRNLNGEVADYIPGWDCHGLPIELKVDK 110

Query: 65  AGVTTK-------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRIL 109
                K              +  +     R+    L +   ++    T  + +       
Sbjct: 111 ELGPKKRELDRPAIIEACRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRT 170

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + + ++KG +Y+G    ++ + D     + EV  
Sbjct: 171 FARAAEKGFLYRGKKPVYWCITDRTALAEAEVEY 204


>gi|210633886|ref|ZP_03297901.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
 gi|210159055|gb|EEA90026.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
          Length = 933

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 124/376 (32%), Gaps = 31/376 (8%)

Query: 137 NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
            D  + +  +              E+      L A                 P     E 
Sbjct: 468 PDWCISRQRNWGVPIPSFTCADCGEKVMNDDTLDAVIALFHEKGSDAWFTDAPESYLGEA 527

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               K G   L   R               I+ VW D+  ++     Y           +
Sbjct: 528 CVCPKCGGHHLKADRD--------------ILDVWWDSGVSWKAVCEYR------DELHY 567

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           PAD+++ G D     F +    +   +   P    +     +  +G K+SKSLGNVIDP 
Sbjct: 568 PADVYLEGSDQHRGWFQSSLLTSVGANGVAPYKAVISQGFTLDGQGRKMSKSLGNVIDPN 627

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V +E+G D +R ++        D   D + L +   +D      N +   +S++   ++
Sbjct: 628 KVCDEMGADIVRLWVASIDTST-DVACDTEILAR--TSDAYRRFRNTLRFLLSVLEGQFE 684

Query: 375 GMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDA 430
                         D+ +L+  ++V  E+    +    +RA   +   V     + Y DA
Sbjct: 685 PATDGVAFDELMPLDKLMLARLTQVQAEVDAAYEGFEFNRAYRTLYDFVVTELSNVYLDA 744

Query: 431 QKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCFQS 488
            K     +K       +   V  E++  L   LQ  +    ++  +       +N+ + +
Sbjct: 745 LKDRLYCEKPGSHEMRSAQTVVAELLSMLMRDLQPILAYTVDEAMEFAPAGCRDNQEYAA 804

Query: 489 LDQRLKPGFMLHKTFD 504
           L    K    L +  +
Sbjct: 805 LLDWYKSPITLEQANE 820



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 16/161 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  +K  +     Y N   H+GHA   I  D++ R+  + G +  +  G D HGQ I   
Sbjct: 47  EGHKKFVLHDGPPYANGPIHLGHAMNKISKDIINRYKAMQGFETPYVPGWDCHGQPIEHK 106

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
            +    T K               F  +N    R+    L +   +D+   T   +H   
Sbjct: 107 VEEKLGTEKFNNTPVAKIRELCNEFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAA 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++K + DKG +Y+G     +         + E+  G +
Sbjct: 167 DIEVFKAMFDKGMVYRGHKPVHWCKHCHTALAEAEIEYGDE 207


>gi|260866176|ref|YP_003232578.1| isoleucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257762532|dbj|BAI34027.1| isoleucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323176331|gb|EFZ61923.1| isoleucyl-tRNA synthetase [Escherichia coli 1180]
          Length = 938

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + +++   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  +    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYMPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FAVSNVNGPISLVIWTTTPWTLPANR 251


>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 933

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 102/288 (35%), Gaps = 26/288 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++             K    PADL++ G D     FH     +   
Sbjct: 531 KETNIMDVWFDSGSSHRGVLEVW------KGLRRPADLYLEGSDQHRGWFHTSLLTSVAS 584

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + + P    +        +G K+SKSLGN + P +VI+  G D LR +    +    D  
Sbjct: 585 TGDSPYKSVLTHGFVNDGEGRKMSKSLGNTVSPADVIKVYGADILRLWC-GSVDYRDDVR 643

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399
              + +K+   ++    I N     +      +            E D+  L+    + +
Sbjct: 644 ISDNIVKQ--MSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKR 701

Query: 400 EIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIR 456
            + E+      +     +   + +     Y D  K     +K +         V  EV+ 
Sbjct: 702 SVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKEDSVARRAAQTVMYEVLM 761

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL---------DQRLKP 495
            L  ++   +   A +I++ L    E R  +S+         D+ LKP
Sbjct: 762 TLTKMVAPILSFTAEEIWESL--PAETREAESIFLADWYVNNDEYLKP 807



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + +  +     ++    L +   +D+   T + R    
Sbjct: 108 VVKEVGVAKAREMSALEIRQLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I + G I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIE-----YYDHVSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      +      GL  
Sbjct: 223 LLDKIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYK 263


>gi|126343280|ref|XP_001379516.1| PREDICTED: similar to isoleucyl-tRNA synthetase [Monodelphis
           domestica]
          Length = 1257

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 66/464 (14%), Positives = 138/464 (29%), Gaps = 34/464 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD---VLDISYDDFI--RTTEKRH 102
               D  G    +    AG   K       R  ++          S++     R+     
Sbjct: 348 VCPVDASGCFTPEVPDFAGQYVKDADKNIIRTIKEQGRLLLAGTFSHNYPFCWRSDTPLI 407

Query: 103 HDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + ++    D        CY     +R++ + N  +  +            P+ 
Sbjct: 408 YKAVPSWFVRVEHMVDRLLENNDHCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIP 467

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               + +   +       L          L  E  + +    + G   L    +      
Sbjct: 468 LWVSDDFEEVVCVGSVAELEDLTGEKLSDLHRESIDHLTIPSRLGKGPLRRVPE------ 521

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
                   +   W ++ +       Y         + +PAD    G D     F+ +   
Sbjct: 522 --------VFDCWFESGSMPYAQVHYPFENKRDFEEAFPADFIAEGIDQTRGWFYTLLVL 573

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  L    P    + +   +   G+K+SK   N  DP  +I   G DALR +L+      
Sbjct: 574 STALFGKPPFKNVIANGLILASDGQKMSKRKKNYPDPTAIISRYGADALRLYLINSPVVR 633

Query: 337 -KDGFYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DE 388
            ++  + ++G++  +   L    N    L+   + +  ++    +    A  ES    D 
Sbjct: 634 AENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNILRLHKEEQVEFLYNENAVKESSNITDR 693

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTV 447
            ILS    ++      M    ++  + +++  V    + Y    +     +         
Sbjct: 694 WILSFMQSLIGFFEVEMAAYRLYTVVPRLVKFVDTLTNWYVRMNRRRLKGENGTSDCIMA 753

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           L     ++  L  L+  + P L   I+  L    +    Q  D 
Sbjct: 754 LETLFSILFSLCKLMAPYTPFLTELIYQNLKTLIDPASVQEKDT 797



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KHRPRFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 62  AQN--AGVTTKVFVDQNSRNFRDMADVLD-----------------ISYDDFIRTTEKRH 102
                     +         +      +                  I +++  +T   + 
Sbjct: 96  IDKFLGIRGPEDVAKMGIAEYNRQCRGIVMRYSAEWKVTISRLGRWIDFENDYKTLYPQF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   +++++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 METVWWVFRQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|190345977|gb|EDK37959.2| hypothetical protein PGUG_02057 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1115

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 107/276 (38%), Gaps = 12/276 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +PA+    G D     F+ +      L  
Sbjct: 561 EEVFDCWFESGSMPYASRHYPFENKELFMNSFPANFISEGLDQTRGWFYTLTVLGTHLFN 620

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +       G+K+SK L N  DP  V++E G DALR ++++      +   +
Sbjct: 621 TAPYQNVIVTGIVSAADGKKMSKRLKNYPDPNIVLKEYGADALRLYMIKSPVARAETLKF 680

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+++ V++ L          + + ++  KD                 D+ +++    
Sbjct: 681 KEEGVREVVSSVLLPWYNSFKFFNDAANIYQKDNGEKFVYNSKLFSTNVMDKWLMASLQS 740

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK--TNPDRASTVLYVTVE 453
           ++  I + MQ   ++  + +++SL+ ++ + Y        LK    + +     L    E
Sbjct: 741 LIAFIHKEMQAYRLYTVVPKLLSLIDDLTNWYI-RFNRRRLKGLSGDKEDTRVALNTLSE 799

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+  +  F P LA+ I+  L V        SL
Sbjct: 800 ALLTLSRAMAPFTPFLADGIYQRLKVYFTEEDLISL 835



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K+           +    PH GH     + D++ R+  ++G  V+   G D HG  I   
Sbjct: 73  KDFPPFAFFDGPPFATGTPHYGHLLASTVKDIIPRYATMNGHHVVRRFGWDTHGLPIEYE 132

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R     +   I  D+  +T     
Sbjct: 133 IDKKLGITGKHDVMKMGIDKYNAECRAIVMRYADEWRRTVTRIGRWIDMDNDYKTLYPEF 192

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++  K  +YKG     YS       ++ E  +   
Sbjct: 193 MESVWWAFKELYKKDAVYKGLRVMPYSTGLTTPLSNFEAQQNYK 236


>gi|154493352|ref|ZP_02032672.1| hypothetical protein PARMER_02689 [Parabacteroides merdae ATCC
           43184]
 gi|154086562|gb|EDN85607.1| hypothetical protein PARMER_02689 [Parabacteroides merdae ATCC
           43184]
          Length = 945

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D +G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLQGFNVLHPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V   +N   +R+  D +  SYD    IRT +  ++   +  + ++ +    
Sbjct: 89  AIQTGQHPEVTTKKNIARYREQMDKIGFSYDWNREIRTCDPEYYKWTQWAFIQMFNSYYC 148



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 92/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDILDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E             
Sbjct: 785 QITDAEPT-ADE--LKSLHKLIKKVTYDIEHFSYNTSISAFMICVNE------------- 828

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   S++      ++ QL +LL  F P  A +++    
Sbjct: 829 -------LSSLKCNKRAILEQLIVLLAPFAPHTAEELWHTCG 863


>gi|116873455|ref|YP_850236.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466497|sp|A0AKC5|SYI_LISW6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116742333|emb|CAK21457.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 921

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELTR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  + +    +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSNDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E    L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAAVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 15/154 (9%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
            K YI      Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A  
Sbjct: 47  RKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIA 106

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
             GV  K             +        R     L I+ D      T    +      +
Sbjct: 107 KKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKV 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           + +++ KG IYKG    ++S   E+   + E+  
Sbjct: 167 FGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|315040948|ref|XP_003169851.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345813|gb|EFR05016.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 1078

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 98/264 (37%), Gaps = 11/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +P D    G D     F+ +      L  
Sbjct: 519 EEVFDCWFESGSMPYASQHYPFKDKEHFEDKFPGDFIAEGLDQTRGWFYTLAVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  V+E  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPALVMERYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V+  L     +        ++   +++ D M       T     D  IL+ C
Sbjct: 639 KESGVKEIVSKVLLPLWNSYKFFEGQVALLKKVENVDYMFDPKAETTNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNEEMAGYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  L   L  F P + + I+  L
Sbjct: 759 VLYTLVRGLAPFTPFITDTIYLRL 782



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K +++        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKKEYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGYHVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      K  V + S  +R   D L   I +D+  +T +   
Sbjct: 90  IDKMLGMSGSEAVEKLGLEAYNAECKAIVMRFSTEWRQTIDRLGRWIDFDNDYKTMDTTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG +Y+G     YS       ++ E  +   
Sbjct: 150 MESIWWILKQLFDKGVVYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|167038345|ref|YP_001665923.1| leucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116746|ref|YP_004186905.1| leucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166857179|gb|ABY95587.1| leucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319929837|gb|ADV80522.1| leucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 816

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGWEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLKEMGATFDWDYEVITCLPEYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQRNWIGKSD 225



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 110/295 (37%), Gaps = 35/295 (11%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G ++ DG+K            N V R +   ++  +     
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKA------IARFVNRVERFIDKFIETRNNPGKI 646

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + ++ +  V    ++ + E+ +    + A+A+++ LV+ + +Y            
Sbjct: 647 KDDMGKDEKELNYVRHYAIKGVTEDAERFQFNTAIARIMELVNALYKY-----------E 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                  + +   EV+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 696 ADVEVKNIKFY-EEVVADLIKLLAPFAPHFSEEMWEKLGYEYSVFNQKWPEWDEK 749


>gi|163755765|ref|ZP_02162883.1| valyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161324286|gb|EDP95617.1| valyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 878

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 96/264 (36%), Gaps = 14/264 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANL 284
           +  W  +    ++    + NP+  + K++ P +  V G DIL F    +    +      
Sbjct: 459 LDTWFSSWLWPMSVFDGIRNPENEEIKYYYPTNDLVTGPDILFFWVARMIIAGYEYRDMK 518

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      +      +G K+SKSLGN  D +++IE  G D +R  L+   A G D  +D+ 
Sbjct: 519 PFTNVYLTGLVRDKQGRKMSKSLGNSPDALKLIENYGADGVRVGLLLSAAAGNDLLFDES 578

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
              +      AN I    +  ++ I +  D +     A    D    S   + L E+ + 
Sbjct: 579 LCDQ--GKKFANKIFQAYN--LTQIWEVSDEVTQPEVAKIAID-WYKSKLQKALVELEDQ 633

Query: 405 MQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
                I  AL     LV +     + +  KP      +     T     + +      +L
Sbjct: 634 YSKYRISDALMISYKLVWDDFCSWFLEMVKPTYGSPID----KTTYDTVISLFEANLKIL 689

Query: 463 QAFVPKLANKIFDILFVADENRCF 486
             F+P L   I+  +    +    
Sbjct: 690 HPFMPFLTEDIWQRMTTRTKEEAL 713



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREAYTIVIPPPNVTGVLHMGHILNNTIQDVLIRRARLKGFNACWVPGTDHASIATEAKV 91

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
            N                       +  ++     +    L  S  +D    T +     
Sbjct: 92  VNKLKQEGIKKSDLTREEFLTHAWEWTHKHGGIILEQLKKLGASCDWDRTKFTMDDDMSA 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    +  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKTFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIY 190


>gi|325267260|ref|ZP_08133922.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981197|gb|EGC16847.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 941

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 103/276 (37%), Gaps = 20/276 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +               WPADL++ G D     F +            P
Sbjct: 547 MDVWFDSGSTHFSVLKQRP------ELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAP 600

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +   G K+SKSLGNVI P  V  E G D LR +       G+    ++  
Sbjct: 601 YKQLLTHGFVVDGNGRKMSKSLGNVIAPQAVYNEFGADILRLWTANTDYSGELSISNE-- 658

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIR- 402
           + KRV  ++   I N +S  +   LKD+D +          E D   L +  R+ +++  
Sbjct: 659 ILKRV-TEMYRRIRNTLS-FLFANLKDFDRIEDAVPLADMVEIDRYALVLARRLQEKLAG 716

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQL 458
           E       H A+  ++   SE     Y D  K   L  T  D     +       + R L
Sbjct: 717 EYYPRYAFHFAVQDLVQFCSEDLGSFYLDILKD-RLYTTQADSHARRSAQTALYHITRSL 775

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            +L+   +   A + ++++   +E+           
Sbjct: 776 VLLMSPVLCFTAEEAWELIGGGEEDSVLYHTWHEFP 811



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 12/153 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I    
Sbjct: 60  GRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPIEVMI 119

Query: 63  QNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           +                + +  +     +     L +   +D   RT + +         
Sbjct: 120 EKLHGRDMPANKFRELCREYAAEQIARQKTDFVRLGVMGDWDKPYRTMDFKTEADTVRTL 179

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +I   G +Y+G     + L   +   + EV  
Sbjct: 180 GEIYKAGYLYRGSKPVQFCLDCGSSLAEAEVEY 212


>gi|148360414|ref|YP_001251621.1| isoleucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|166229745|sp|A5IFX5|SYI_LEGPC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148282187|gb|ABQ56275.1| isoleucyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 931

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 122/356 (34%), Gaps = 19/356 (5%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           + V      +  N   N   W       +          +  E HP+ +  IER   +I 
Sbjct: 441 NWVPDWGKARISNMVENRPDWCISRQRSWGTPMPLFVHKTTRELHPDTLELIERVAVMIE 500

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                      S +      K  D     M VW+D+  ++ +          +    +PA
Sbjct: 501 KSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSVLK------HNNDLDFPA 554

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D++  G D     F++    A  +    P    +     +  +G+K+SKS GN +   ++
Sbjct: 555 DVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKL 614

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + + G D LR ++       +     ++ +K+  NAD    I N   R +   L D++  
Sbjct: 615 VNQHGADILRLWVASTDYRHE-VSISEEIIKR--NADAYRRIRNTA-RFLLANLFDFNPA 670

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
                     E D   L  C  + +EI    +N   H    ++ +   V     Y D  K
Sbjct: 671 SDCIDAKELLELDRWALKRCQLLQEEIITAYENYHFHLIYQKIHNFCAVDMGSFYLDLIK 730

Query: 433 PWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +    K +  R  +       +++   I L   +   A +I+  +   +    F
Sbjct: 731 DRQYTTAKDSIAR-RSCQTAMYHMVKAFTIWLAPILSFTAEEIWQTIPGNNSESIF 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 74/246 (30%), Gaps = 34/246 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 49  KRFILHDGPPYANGHLHCGHALNKILKDIIIKSKTFSGFDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                   ++ + F  +           +DI  D+F R                +   GD
Sbjct: 109 KVGKAGSKISPREFRAKCREYAASQ---IDIQRDEFQR----------------LGVLGD 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKL 176
            Y    +  Y            +       +      PV W  + G     +   Y+DK 
Sbjct: 150 WYNPYVTMDYHYEANIV---RALGLMIKNGHLQQGFKPVHWCIDCGSALAEAEVDYEDKT 206

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
               +     + P E  N   +        L   + +  T      +   P+ I Y  ID
Sbjct: 207 SPSIDVAFSAVNPSEFLNCFETQPAVKPLILPIWTTTPWTLPANEAVCLHPE-IDYALID 265

Query: 234 ALTNYL 239
           A  +Y 
Sbjct: 266 AGNSYY 271


>gi|257076387|ref|ZP_05570748.1| valyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 772

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 118/331 (35%), Gaps = 25/331 (7%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS------ 210
           V    +  Y   ++  +       + +     P+   +     + +G ++L +       
Sbjct: 362 VPGHMKTRYDNWVTGLKWDWCISRQRYFGVPFPVWYCDNCGEIILAGNEELPVDPRLDNK 421

Query: 211 -RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR 269
            RK    G         +M  W  +  +      +++         +P D    G DI+ 
Sbjct: 422 KRKCEKCGSDNIVPETDVMDTWATSSLSPTLYLKHINQM-----DLYPMDSRFQGHDIIT 476

Query: 270 FHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             A      ++L    +P  K V S       G+K+SKS GN+++P  +IE  G DALRY
Sbjct: 477 SWAFTTILRSYLHYGEIPWRKIVISGNVYDPFGQKMSKSKGNIVEPRAIIENYGADALRY 536

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD 387
           +       G++    +  L +         + N +   + M+L +      T   F   +
Sbjct: 537 W-ASTTMQGENIKLREQDLMR--GRKTVIKLENSLK--LIMMLANNKKPGNTIPEF-PVN 590

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS 445
             I +   R ++E+ E M+N  I +A   +         D Y +  K    + +  DR  
Sbjct: 591 RWITTKMERTIKEVTEYMENNEIMKARISLDKFFWNEYCDNYLEMIKN---ESSKDDRRD 647

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
             L     V   +  +    +P +  ++F  
Sbjct: 648 ETLSTAFSVFENILKMYSPIMPFITEELFHQ 678



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 15/146 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   I T     + + H+GHA+     D +AR+ R+ G +V +  G D++G    K 
Sbjct: 25  KGDKNYTIDTPPPTVSGKMHVGHAFSYPQQDFIARYKRMKGYNVFYPWGFDDNGLPTEKF 84

Query: 62  AQNAGVTTKVFV--DQNSRNFRDM-----------ADVLDISYD--DFIRTTEKRHHDTC 106
            +     T             R++                IS D  ++I T+        
Sbjct: 85  VEKERKVTIDNTPLKDYIEICREVSRESEKGLYQAWYDTGISADFKNYIDTSSDFSIKIS 144

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRD 132
           + ++  +  K   Y+           
Sbjct: 145 QEMFLDLVAKKRAYRDEAPYITCPTC 170


>gi|289577538|ref|YP_003476165.1| leucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527251|gb|ADD01603.1| leucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 816

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYEVITCLPEYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQRNWIGKSD 225



 Score =  120 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 110/295 (37%), Gaps = 35/295 (11%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G ++ DG+K            N V R +   ++  +    T
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKAISR------FVNRVERFIDKFIETRNNPGKT 646

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +  +  V    ++ + E+ +    + A+A+++ LV+ + +Y            
Sbjct: 647 KDEMGKDENELNYVRHYAIKGVTEDAERFQFNTAIARIMELVNALYKY-----------D 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                  + +   +V+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 696 TDVEVKNIEFY-EDVVADLIRLLAPFAPHFSEEMWEKLGYEYSVFNQKWPKWDEK 749


>gi|71903844|ref|YP_280647.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|84029570|sp|Q48SL8|SYI_STRPM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71802939|gb|AAX72292.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 933

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 104/281 (37%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNTKENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|167569077|ref|ZP_02361951.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 945

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGCAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPASEWLEIDRYAVAFAAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASNARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T   ++       
Sbjct: 114 IEKQFGKSLPAAEVMEKARAYATEQIEKQKAGFKRLGVLGEWDNPYKTMNFQNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|326674754|ref|XP_682807.5| PREDICTED: valyl-tRNA synthetase [Danio rerio]
          Length = 1271

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 134/421 (31%), Gaps = 98/421 (23%)

Query: 150  YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
             +   + V+ + +  ++        +      +    I+P        +++   ++D  +
Sbjct: 666  CSRSKDIVEPLLKPQWYVDCREMGKQAADVVRNGELKIIPDHHLKTWFNWMD-NIRDWCI 724

Query: 210  SRKTFDWGIKIP------DDP--------------------------------------- 224
            SR+   WG +IP      +DP                                       
Sbjct: 725  SRQ-LWWGHRIPAYFVTVNDPAVKPGEDVDGHYWVSGRSEQEAREKAAKRFNVTADKISL 783

Query: 225  ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
               + ++  W  +     +  G+ +  +  +  F+P  L   G DIL F    +      
Sbjct: 784  RQDEDVLDTWFSSGIFPFSIFGWPNESEDLRV-FYPGTLLETGHDILFFWVARMVMMGLK 842

Query: 280  LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI---------------------- 317
            L+  LP  +           G K+SKSLGNVIDP++VI                      
Sbjct: 843  LTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLADSNLDPLEI 902

Query: 318  ---------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                            E G DALR+ L    + G+D   D + +         N + N V
Sbjct: 903  EKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINLDVNRILG--YRHFCNKLWNAV 960

Query: 363  SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              ++  + + +         G+ + SD  ILS  S  +       +          + + 
Sbjct: 961  KFAMRTLGEGFVPCEKAQLCGSESVSDRWILSRLSAAVALCDGGFKAYDFPTITTAIYNF 1020

Query: 421  V--SEVDRYFDAQKP-WELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDI 476
                  D Y +  KP +    +   + + V   T+   +     LL   +P ++ ++F  
Sbjct: 1021 WLYELCDVYLECVKPVFSRTDSKGQKQADVCRQTLYTCLEVGLRLLSPIMPFVSEELFQR 1080

Query: 477  L 477
            L
Sbjct: 1081 L 1081



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 342 FMMCIPPPNVTGSLHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 401

Query: 67  VTTKVFVDQ---NSRNFRDMADVLD----------------ISYDDFIRTTEKRHHDTCR 107
           +  +             +++    +                + +D    T + +     +
Sbjct: 402 MRERKMTRHDLGRENFIKEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDDKLSFAVQ 461

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 462 EAFIRMHEEGVIYRSKRLVNWSCTLNSAISDIEV 495


>gi|225681907|gb|EEH20191.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1079

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 109/294 (37%), Gaps = 12/294 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++  W ++ +    +  Y         K +P D    G D     F+ +      L  
Sbjct: 519 DEVLDCWFESGSMPYASQHYPFENQEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILK--DYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V   L             V++I K  D D +       T     D  IL+ C
Sbjct: 639 KESGVKEIVAKVLLPLWNSYKFFEAQVALIKKIEDVDYVFDPAAEATNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRKRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           V+  L   L  F+P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 759 VLYTLVRGLAPFIPFITDNIYLRL-LPHIPKSLQAEDSRSVHFLPFPEVREELF 811



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + RE         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGREPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
              A                     +  V + +  +R++ D L   I +D+  +T +   
Sbjct: 90  IDKALGMSGSEAVEKLGLAKYNNECRAIVMRFATEWREIIDRLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   + K++ DKG IY+
Sbjct: 150 MESLWWIVKQLFDKGMIYR 168


>gi|150404059|gb|ABR68343.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDEMEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 120


>gi|54296958|ref|YP_123327.1| isoleucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822616|sp|Q5X6G6|SYI_LEGPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53750743|emb|CAH12150.1| Isoleucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 931

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 122/356 (34%), Gaps = 19/356 (5%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
           + V      +  N   N   W       +          +  E HP+ +  IER   +I 
Sbjct: 441 NWVPDWGKARISNMVENRPDWCISRQRSWGTPMPLFVHKTTRELHPDTLELIERVAVMIE 500

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
                      S +      K  D     M VW+D+  ++ +          +    +PA
Sbjct: 501 KSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSVLK------HNNDLDFPA 554

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D++  G D     F++    A  +    P    +     +  +G+K+SKS GN +   ++
Sbjct: 555 DVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKL 614

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + + G D LR ++       +     ++ +K+  NAD    I N   R +   L D++  
Sbjct: 615 VNQHGADILRLWVASTDYRHE-VSISEEIIKR--NADAYRRIRNTA-RFLLANLFDFNPA 670

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
                     E D   L  C  + +EI    +N   H    ++ +   V     Y D  K
Sbjct: 671 SDCIEAKELLELDRWALKRCQLLQEEIITAYENYHFHLIYQKIHNFCAVDMGSFYLDLIK 730

Query: 433 PWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +    K +  R  +       +++   I L   +   A +I+  +   +    F
Sbjct: 731 DRQYTTAKDSIAR-RSCQTAMYHMVKAFTIWLAPILSFTAEEIWQTIPGNNSESIF 785



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 74/246 (30%), Gaps = 34/246 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 49  KRFILHDGPPYANGHLHCGHALNKILKDIIIKSKTFSGFDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                   ++ + F  +           +DI  D+F R                +   GD
Sbjct: 109 KVGKAGSKISPREFRAKCREYAASQ---IDIQRDEFQR----------------LGVLGD 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKL 176
            Y    +  Y            +       +      PV W  + G     +   Y+DK 
Sbjct: 150 WYNPYVTMDYHYEANIV---RALGLMIKNGHLQQGFKPVHWCIDCGSALAEAEVDYEDKT 206

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
               +     + P E  N   +        L   + +  T      +   P+ I Y  ID
Sbjct: 207 SPSIDVAFSAVNPSEFLNCFETQPAVKPLILPIWTTTPWTLPANEAVCLHPE-IDYALID 265

Query: 234 ALTNYL 239
           A  +Y 
Sbjct: 266 AGNSYY 271


>gi|222153411|ref|YP_002562588.1| isoleucyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114224|emb|CAR42801.1| isoleucyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 931

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNAREQLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWV-TSVDTDND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                D L         + N +  L++ +      + +            D+ +    ++
Sbjct: 631 VRVSMDILGQVSETYRKIRNTLRFLIANTSDF---NPNTNRVAYEELAPVDKYLTIKFNK 687

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++    + +N         V++ V       Y D  K     +        R  TV Y 
Sbjct: 688 LVEVFNNSYENYDFMAIYKAVVNFVTIDLSAFYLDFAKDVVYIEAANSLARRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L   +E 
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEEEE 777



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G +  +  G D HG  I + 
Sbjct: 45  EGKPSFHLHDGPPYANGNIHVGHALNKISKDIIVRAKSMSGYNAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               G+  K             +        R     L +S  +D+   T +  +     
Sbjct: 105 LAKKGIKRKEMDLAEYLEMCRDYALSQVDKQRQDFKRLGVSADWDNPYVTLDPAYEADQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|167561854|ref|ZP_02354770.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 945

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGCAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPASEWLEIDRYAVAFAAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASNARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T   ++       
Sbjct: 114 IEKQFGKSLPAAEVMEKARAYATEQIEKQKAGFKRLGVLGEWDNPYKTMNFQNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|134045150|ref|YP_001096636.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132662775|gb|ABO34421.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 1034

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 117/323 (36%), Gaps = 17/323 (5%)

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDD 223
           +   L  +  +    YE         +R NE  +         +     T   G K+   
Sbjct: 467 WGIPLPIWICEECGNYEVIGSVDELTQRANEKDLDLSDIHKPAVDNITLTCSCGGKMKRT 526

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           P  ++ VW D+      + G              A     G D +   F++ +  + ++ 
Sbjct: 527 PD-VLDVWYDSGLAPYASIGSKTLKK--------AKFITEGNDQVTKWFYSQHALSAVVF 577

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            +    K +     +   GEK+SKSLGN++ P +V E+ G D LR++L+      +D  +
Sbjct: 578 DDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTEQYGADVLRFYLLSANKAWEDLRF 637

Query: 342 DKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
               + +     + N + N  + S   M+L D+           + D  ILS  + V +E
Sbjct: 638 SYSEMDE--TRSMLNTLWNSYAFSANYMVLDDFVPNDEYFKHVKDEDAWILSRINTVAKE 695

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
             E ++   +H     +   +       Y    +     + N  +  +       VI +L
Sbjct: 696 AVEALEKPHLHTYTWTLRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKL 755

Query: 459 AILLQAFVPKLANKIFDILFVAD 481
             ++    P L+ +I+  L   D
Sbjct: 756 ISIMAPVTPHLSEEIYQNLKTED 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 20/160 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  + Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I   
Sbjct: 34  EQGPEYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVK 93

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
            +N                       K F   +          L +   +++     ++ 
Sbjct: 94  VENEFNIGSKKDIETKIGTLEFINKCKEFALNHLEFMEVQFKNLGVWLDFENAYMPIKRD 153

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + +      KK  +K  + K   SG++  R E    + EV
Sbjct: 154 YMEMGWWTLKKAHEKDLLTKDLRSGYWCPRCETSLAEHEV 193


>gi|307267109|ref|ZP_07548620.1| leucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917862|gb|EFN48125.1| leucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 816

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  R+ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYEVITCLPEYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQRNWIGKSD 225



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 114/295 (38%), Gaps = 35/295 (11%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G ++ DG+K            N V R +   ++  +    T
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKAISR------FINRVERFIDKFIETRNNPGKT 646

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +  +  V    ++ + E+ +    + A+A+++ LV+ + +Y          +T
Sbjct: 647 KDEMGKDENELNYVRHYAIKGVTEDAERFQFNTAIARIMELVNALYKY----------ET 696

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
           + +  +   Y   EV+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 697 DVEVKNIKFYE--EVVTDLIRLLAPFAPHFSEEMWEKLGYEYSVFNQKWPKWDEK 749


>gi|187925133|ref|YP_001896775.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|254782379|sp|B2T6I7|SYI_BURPP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187716327|gb|ACD17551.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 945

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 108/285 (37%), Gaps = 20/285 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   +++ + +  +I  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHARPVEDWLEIDRYAVALSTNLQNDILS 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           +      H  +A++ +  SE     Y D  K   L  T  D  +  +       +   L 
Sbjct: 722 HYDKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYHIAHGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE---NRCFQSLDQRLKPGFMLHK 501
            L+  F+   A + + I     E      + +       G +L K
Sbjct: 781 RLMAPFLSFTAEEAWKIFQPNSETIFTETYHAFPAVPDAGALLDK 825



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKVGFRRLGVLGDWDNPYKTMNFTNEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|116334043|ref|YP_795570.1| isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269273|sp|Q03QI3|SYI_LACBA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116099390|gb|ABJ64539.1| Isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 937

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 104/281 (37%), Gaps = 17/281 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ T++                 +PADL++ G D     F++    + 
Sbjct: 520 FTKETDIMDVWFDSGTSHQGVLAER------DYLDFPADLYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +   P  + V     +   G K+SKSLGN I P E+I ++G D +R ++   +    D
Sbjct: 574 AATGKAPYKQVVSQGFTLDKDGHKMSKSLGNTIAPDEIISKMGADIVRLWV-TSVDSSAD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                +   K   +D    + N + R +     D+D              D  +L   + 
Sbjct: 633 VRVSTEAFVKI--SDSYKKLRNTM-RYLLANTSDFDPQTDAIAVDDLQPVDRHMLYQLNE 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYVTVE 453
             + +R +  +        ++I+ V       Y D  K    ++  +     ++  V  +
Sbjct: 690 FAKSVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAADSPVRRSMQTVFYQ 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           +   L  L+   +P  A +I+D L   ++      +   L+
Sbjct: 750 IAVSLTKLITPILPHTAEEIWDFLKEPEDFVQLAEMPAVLE 790



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  EGKPTFILHDGPPYANGPIHMGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              AG   K             +  +     R+    L +S  +D+   T +        
Sbjct: 105 LTKAGYDRKKMSTAEFRDLCREYALKQVDQQREGFKRLGVSAEWDNPYLTLKPEFEAAEV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ +G IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGEMAKRGLIYKGKKPVYWSWSSESAMAEAEVEYH 201


>gi|242238039|ref|YP_002986220.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130096|gb|ACS84398.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 940

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 108/289 (37%), Gaps = 18/289 (6%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
               +G++           G++  + +     + VW D+ + + +         G     
Sbjct: 502 RVEDAGIQAWWDLDPAELLGVEASVYEKVPDTLDVWFDSGSTHASVVDVRPEFAGHA--- 558

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             AD+++ G D     F +    A  +    P  + +     +  +G K+SKS+GN I P
Sbjct: 559 --ADMYLEGSDQHRGWFMSSLMIATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTIAP 616

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V++++G D LR ++      G D     + LK+   AD    I N   R +   L  +
Sbjct: 617 QDVMDKMGADILRLWIGSTDYSG-DIAVSDEILKRS--ADAYRRIRNTA-RFLLANLNGF 672

Query: 374 DGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFD 429
           D  + T  P      D   +       +EI E  ++   HR + +++   S      Y D
Sbjct: 673 DPALHTVKPEDMVVLDRWAVGCAKAAQEEIVEAYESYDFHRVVQRLMQFCSVEMGSFYLD 732

Query: 430 AQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             K  +   K++     +       +   L   +   +   A++I+  L
Sbjct: 733 IIKDRQYTAKSDGVARRSCQTALFHIAEALVRWMAPILSFTADEIWGYL 781



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLVGKPGEKVSAAQFREACRQYAAEQVAGQKKDFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 166 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 202


>gi|33151511|ref|NP_872864.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423872|sp|Q7VP34|SYI_HAEDU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33147731|gb|AAP95253.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 935

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 127/397 (31%), Gaps = 46/397 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q   AQ       V+W+   G     +   
Sbjct: 396 RIKHSYPHCWRHKTPIIFRATPQWFIGMEKQGLRAQALAEIKTVRWIPNWGEARIDTMVA 455

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQ----- 225
           ++          + +P+     NE        L  L L  +     GI+   D       
Sbjct: 456 NRPDWCISRQRTWGVPMAMFVHNETEELHPRTLDILELVAQRVEQQGIQAWWDLDPTEVL 515

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + Y +        +G       AD+++ G D     F +
Sbjct: 516 GEDAQHYHKVPDTLDVWFDSGSTYASVVEQRPEFNGQ-----TADMYLEGSDQHRGWFMS 570

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               A   +   P  + +     +  KG K+SKS+GNVI P EV  + G D LR ++   
Sbjct: 571 SLMLASATNGKAPYQQVLTHGFVVDEKGRKMSKSIGNVIVPSEVWNKNGADILRLWVAS- 629

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESD 387
                   Y  +        + A      +  +   +L + +G IP      P      D
Sbjct: 630 ------TDYTAEMKVSHGILNSAGDAYRRIRNTARFLLSNLNGFIPARDEVKPNEMIALD 683

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRA 444
              +S       +I E  ++   H  + +++   S      Y D  K  +   K +    
Sbjct: 684 RWAVSCALEAQNDIIEAYEHYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLAR 743

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            +       +   L   +   +   A++I+  L   +
Sbjct: 744 RSCQTALWHIAEALVRWIAPILSFTADEIWSHLPTVE 780



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 70/225 (31%), Gaps = 16/225 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNLHLGHAVNKILKDIIMKSKTASGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            ++                  + + ++     +     + +   +D+   T       + 
Sbjct: 106 VESIVGKPNEKISAAEFRQACREYANEQVDRQKADFIRMGVLGDWDNPYLTMNFNTEASI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+   G +YKG     + L   +   + EV    D    +         E     
Sbjct: 166 IRTLAKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFKACDETAIET 224

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              +     + +   +   + +P  R   +   ++  L  L+  R
Sbjct: 225 LFNAKGNGPISAIIWTTTPWTMPSNRAIAIHPELEYALVQLADER 269


>gi|312978116|ref|ZP_07789861.1| leucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895091|gb|EFQ44160.1| leucine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 804

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 72/438 (16%), Positives = 147/438 (33%), Gaps = 63/438 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYY----NDDEVYKGADGQYY 150
            + R +         ++     GDI K  ++G     +  +     N++   +  +    
Sbjct: 340 HDDRDYAFATKFGLPVNPVIEGGDIEKEAFTGNGKHFNSEFLDGLDNEEAKKRMIEWLED 399

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISF 199
           +         +   + F    Y  + +                     LP     +    
Sbjct: 400 HNCGKKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGTTSLVPEDQLPLRLPHATDIKPSGT 459

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKF 255
            +S L DL+      D   +        M  W  +   YL      ++          K+
Sbjct: 460 PESPLADLTDWVNVVDENGRKGKRETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKKW 519

Query: 256 WPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P DL++ G +    H +Y   +         +    P  K +++ G IL   EK+SKS 
Sbjct: 520 LPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKNHEKMSKSK 578

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EVI+E G D+LR + +          +D +G                + R   
Sbjct: 579 GNVVNPDEVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWR 629

Query: 368 MILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + + D D   IP      ++D  +  V +  ++++ E+ ++   + A++Q++  ++    
Sbjct: 630 LFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFESLHFNTAISQMMVFMNAA-- 687

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                           +A T+     E       LL    P +  +I+ +    DE+  +
Sbjct: 688 ---------------QKAKTIPR---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESITY 728

Query: 487 QSLDQRLKPGFMLHKTFD 504
                   P  ++  T +
Sbjct: 729 AKWPTY-DPAKLVESTVE 745


>gi|254831739|ref|ZP_05236394.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 921

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|328954555|ref|YP_004371889.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454879|gb|AEB10708.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 933

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 101/272 (37%), Gaps = 17/272 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G       + I+ VW D+  +Y                 +PADL++ G D     F
Sbjct: 518 CPRCGGTELRKERDILDVWFDSGVSYACVLEARP------GLRFPADLYLEGSDQHRGWF 571

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           H+    A       P  + +     +  +G+K+SKSLGN+I P +VI+E G + LR ++ 
Sbjct: 572 HSSLLTAVATRGQAPYRRVLTHGFAVDGEGKKMSKSLGNIIAPQDVIQEYGAEILRLWVS 631

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--MIPTPGAFTESDE 388
            E     +       LK+    +    + N   R +   L D+D      +P    E D 
Sbjct: 632 AEDY-RDEVRLSDQILKQL--TEAYRRLRNTA-RFLLGNLFDFDPPRHYVSPQQREELDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPW-ELKKTNPDRAS 445
             L   ++++Q +RE       H     +     V     Y D  K    + + +     
Sbjct: 688 LTLCWLAKLIQRVREAYDRFEFHVVYHSLHQFCAVELSTLYLDILKDRLYISRPDSSERR 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +      +++  L  L+   +   A +I+  L
Sbjct: 748 SAQSTLYDLLLSLTTLMAPVLSFTAEEIWGYL 779



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +ER +  +     Y N   H+GHA   I+ D++ +  ++ G +  +T G D HG  I   
Sbjct: 47  QERPRYILHDGPPYANGNIHLGHALNKILKDIIIKSKQMSGFECPYTPGWDCHGLPIEHQ 106

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +     R     L +  D F    T    +    
Sbjct: 107 VDKELKKKRLHLSQLEVRQKCREYALKYIDIQRRDFMRLGVLGDWFNPYLTMANDYAAQI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              +  I+  G +Y+      +         + EV  
Sbjct: 167 IAEYGAIALAGGVYRSKKPVHWCASCHTALAEAEVEY 203


>gi|300727544|ref|ZP_07060935.1| leucine--tRNA ligase [Prevotella bryantii B14]
 gi|299775247|gb|EFI71848.1| leucine--tRNA ligase [Prevotella bryantii B14]
          Length = 952

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIFARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  +QN  ++R+  D +  S+  D  +RT + +++   +  ++K+     
Sbjct: 88  YAIQTGQHPAITTEQNISHYREQLDKIGFSFDWDREVRTCDPKYYHWTQWAFEKMFGSFY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       E +
Sbjct: 148 CNTCKSAQPIEKLVERF 164



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 72/178 (40%), Gaps = 31/178 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P +++EE G D LR + +          +D +G+             N
Sbjct: 722 EKMSKSMFNVVNPDDIVEEYGADTLRLYEMFLGPVEASKPWDTNGIDGCFR--FLKKFWN 779

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L          + D +I      T+ +   L    ++++++ E+++    + A++  +  
Sbjct: 780 L------FFEHNTDKLIINDDEPTKEN---LKSVHKLIKKVSEDIEKFSYNTAISAFMIA 830

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+E                              +++ + IL+  F P +A +++ +L 
Sbjct: 831 VNE--------------------LGQQKCHNKTLLKDMVILIAPFAPHIAEELWHVLG 868


>gi|289525341|emb|CBJ14817.1| valyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434891|gb|ADH17069.1| valyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438611|gb|ADH20764.1| valyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 939

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/405 (17%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
           G  Y+        L  + + + D       G   + +           Y   ++  +D  
Sbjct: 346 GVSYRSGAIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWC 405

Query: 177 L-SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
           +           +   + +E +           + R    W      DP  ++  W  + 
Sbjct: 406 ISRQLWWGHRIPVWHNKHDENVICFDGEGGPEEVMRDPESW----YQDPD-VLDTWFSSG 460

Query: 236 TNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSH 293
              LT  G+ D       KF+P  + V G DIL F    +      +    P    VF H
Sbjct: 461 LWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEPFSD-VFLH 519

Query: 294 -----------------------------------GFILHKGEKISKSLGNVIDPIEVIE 318
                                                ++ K EK+SKS GNVIDPIE+IE
Sbjct: 520 GLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVIDPIEMIE 579

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG--- 375
             G DA+R  L      G+    D    ++  N    N + N        I +       
Sbjct: 580 AYGADAVRLTLCSCANRGEQIDLDYRLFEEYKN--FINKLWNGARFIFGHISELTSCDLE 637

Query: 376 MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP 433
                      D  IL   + +L  I  +       +  +             Y +  KP
Sbjct: 638 EGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYLEIIKP 697

Query: 434 WELKKTNPDRASTVLY-VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               K   ++  +    +   ++  +  +L   VP +   +F  L
Sbjct: 698 TLFGKQGSNQQRSTKRKLLATLLINILGVLHPIVPYITETLFQKL 742



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            E+    I           H+GHA    + D L R+ R+ G +V +  GTD  G      
Sbjct: 35  SEKPAYSIVMPPPNVTGILHMGHALVNTLQDTLIRYKRMQGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLKASLGKQRTDFSREEFLKHVWDWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 GANRAVKKAFKILFDKGVIYRGYYLVNWDPILQTALADDEVEYEERDGWLYYIRYQVVNS 212

Query: 160 ME 161
            E
Sbjct: 213 EE 214


>gi|77359865|ref|YP_339440.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|84029560|sp|Q3IEA2|SYI_PSEHT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76874776|emb|CAI85997.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 942

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 101/279 (36%), Gaps = 17/279 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K     Q  + VW D+  ++             +    PADL++ G D     F +    
Sbjct: 529 KQYMKVQDTLDVWFDSGVSHACVVD------AREDLTGPADLYLEGSDQHRGWFMSSMMT 582

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
           +  ++ + P  + +     +   G K+SKSLGNVI P  V+ ++G D LR ++       
Sbjct: 583 SVAINGHAPYRQVLTHGFTVDENGRKMSKSLGNVISPQNVMNKLGADILRLWVASTDYTA 642

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVC 394
           +    D+       +AD    I N  SR +   L  +D            E D+ I+   
Sbjct: 643 EMTVSDE---IFNRSADRYRRIRNT-SRYLLANLNGFDPKTDQVAVNDMVELDKWIVGRA 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRASTVLYVT 451
           +++  EI     +  +     ++++         Y D  K  +   K++     +     
Sbjct: 699 AQLQTEILAAYDSYQMLLVTQKLMNFCTGELGSFYLDVIKDRQYTAKSDSHARRSCQTAL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             +   +   +   +   A +I++ L     +  F S  
Sbjct: 759 YHIAEAMTRWMAPIMSFTAQEIWEALPGERSDYVFTSTW 797



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   H+GH+   I+ D++ +   L   D     G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGDIHLGHSVNKILKDIIVKSKTLSDFDSPLVPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T         
Sbjct: 106 VEKKVGKPGVKVTASEFREKCRAYAKKQVEGQKVDFKRLGVFADWDKPYLTMNFDFEANA 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +  +I +KG ++KG     +     +   + EV  
Sbjct: 166 IRVLGRIIEKGHLHKGAKPVHWCTDCGSALAEAEVEY 202


>gi|319938282|ref|ZP_08012679.1| leucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319806575|gb|EFW03233.1| leucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 798

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYNVLHPMGFDSFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N   F     +L  S+D    + T +  ++   + ++K++ + G  
Sbjct: 90  AIKTGNHPEGFTLENIATFTKQLKMLGFSFDWEKCVSTCDPDYYKWTQWIFKQLYNDGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         +DE+  G           PV     + +   +  Y +KLL  
Sbjct: 150 RNVDIPVNWCEELGTVLANDEIIDGKS----ERGGYPVVRKNMKQWVIDIPKYAEKLLDG 205

Query: 180 YESHPEFILPIERRNEVI 197
            E+        E +   I
Sbjct: 206 LETIDWPESTKEIQRNWI 223



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 62/435 (14%), Positives = 142/435 (32%), Gaps = 69/435 (15%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            ++R ++  +        + + GD+ K  ++      +  + N    +D + K       
Sbjct: 342 HDERDYEFAKKFGIDIIPVLEGGDVSKEAWTQDGLHINSDFLNGMNKEDAIAKMTQWLKE 401

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN--------EVISFVKS 202
           +             + F    Y  + +          + +            E  S  KS
Sbjct: 402 HHCGQQKINYRLREWIFARQRYWGEPIPIINFEDGTSVALSDDQLPLILPPLEDYSPSKS 461

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS------KAKFW 256
           G   L  +    +  +      +    +   A +++        + D           + 
Sbjct: 462 GASPLDKATDWVNIDVNGQKGKRETSTMPGSAGSSWYYMRYIDPHNDKEIADRKLLDHWL 521

Query: 257 PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P DL+V G +    H +Y   +         LS   P  K       +   GEK+SKS G
Sbjct: 522 PVDLYVGGPEHAVGHLLYSRMWNRYLYDKGYLSHPEPFQKLYHQGMILGGNGEKMSKSKG 581

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           NVI+P +++   G D LR + +          + + G+         +G    + R   +
Sbjct: 582 NVINPDDIVNTYGADTLRVYEMFMGPLEASKPWSESGV---------DGARKWLDRVYRL 632

Query: 369 ILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           I++         G  T+ +D S+  V  + ++++  + +    + A++Q++  V+E  + 
Sbjct: 633 IIE--------SGKLTDNNDHSLDFVYHQTVKKVTNDYETLGFNTAISQMMIFVNEAYKA 684

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RC 485
               +P+                       L  +L    P +  +++ +L          
Sbjct: 685 PTLYRPYA--------------------ESLVKMLNCIAPHICEEMWTLLGHEGTIAYES 724

Query: 486 FQSLDQRLKPGFMLH 500
           + + D+ +     + 
Sbjct: 725 WPTYDEAMLEQATVE 739


>gi|226289077|gb|EEH44589.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 1079

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 109/294 (37%), Gaps = 12/294 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++  W ++ +    +  Y         K +P D    G D     F+ +      L  
Sbjct: 519 DEVLDCWFESGSMPYASQHYPFENQEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILK--DYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V   L             V++I K  D D +       T     D  IL+ C
Sbjct: 639 KESGVKEIVAKVLLPLWNSYKFFEAQVALIKKIEDVDYVFDPAAEATNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRKRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           V+  L   L  F+P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 759 VLYTLVRGLAPFIPFITDNIYLRL-LPHIPKSLQAEDSRSVHFLPFPEVREELF 811



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + RE         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGREPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
              A                     +  V + +  +R++ D L   I +D+  +T +   
Sbjct: 90  IDKALGMSGSEAVEKLGLAKYNNECRAIVMRFATEWREIIDRLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   + K++ DKG IY+
Sbjct: 150 MESLWWIVKQLFDKGMIYR 168


>gi|325090342|gb|EGC43652.1| isoleucyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 1079

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 140/412 (33%), Gaps = 17/412 (4%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +++ +                  +E+Y+    V    D ++ +   N   W      ++ 
Sbjct: 404 IYRAVPSWFVKIGPVIPQMLQGIEESYWVPSFVK---DKRFASWIANARDWNISRNRYWG 460

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW--GIKIPDDPQY 226
                     Y E      +   R+    +   + L    +   T     G  +    + 
Sbjct: 461 TPIPLWASEDYKEIIAIGSVEELRQLSGYTGELTDLHRDKIDHITIPSKQGKGVLRRVEE 520

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W ++ +    +  Y         K +P D    G D     F+ +   +  L   L
Sbjct: 521 VLDCWFESGSMPYASQHYPFENKEHFEKSFPGDFIAEGLDQTRGWFYTLAVISTHLYGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRFKE 640

Query: 344 DGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVCSR 396
            G+K+ V   L     +        ++   ++D + +       T     D  IL+ C  
Sbjct: 641 SGVKEIVAKVLLPLWNSYKFFEAQVALLKKIEDVEYVFDPAAEATNTNVMDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 701 LLKFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             L   L  F P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 761 YTLVRGLAPFTPFITDNIYLRL-LPHIPKSLQAEDSRSVHFLAFPEVREELF 811



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRTPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   D L   I +D+  +T +  +
Sbjct: 90  IDKTLGMSGSEAVEKLGLGKYNAECRAVVMRFAAEWRQTIDRLGRWIDFDNDYKTMDTSY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG IY+G     YS       ++ E  +   
Sbjct: 150 MESLWWIVKQLFDKGVIYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 921

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/271 (20%), Positives = 110/271 (40%), Gaps = 19/271 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               Q IM VW D+ +++             +    PADL++ G D     F++    A 
Sbjct: 517 FTKEQDIMDVWFDSGSSHQAVLEER------EDLVRPADLYLEGSDQYRGWFNSSLSTAV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR ++   +    D
Sbjct: 571 AVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWV-SSVDYQAD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSR 396
                  LK+   A++   I N   R +   L D+D            E D+ +L   ++
Sbjct: 630 VRVSDAILKQV--AEVYRKIRNTF-RFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNK 686

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--TNPDRASTVLYVTV 452
           ++ ++++             + +   +     Y D  K     +   +PDR  ++  V  
Sbjct: 687 LIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDR-RSMQTVFY 745

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           E +  L  L    +P  A++++  L   +E 
Sbjct: 746 ETLLALVKLSAPILPHTADELWSHLTFVEEQ 776



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +     R+    L +  D      T +  +    
Sbjct: 105 LTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|227876926|ref|ZP_03995022.1| leucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850182|ref|ZP_05555612.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047820|ref|ZP_06020770.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|227863483|gb|EEJ70906.1| leucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256713154|gb|EEU28145.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260571877|gb|EEX28448.1| leucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 804

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 146/438 (33%), Gaps = 63/438 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYY----NDDEVYKGADGQYY 150
            + R +         ++     GDI K  ++G     +  +     N++   +  +    
Sbjct: 340 HDDRDYAFATKFGLPVNPVIEGGDIEKEAFTGNGKHFNSEFLDGLDNEEAKKRMIEWLED 399

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISF 199
           +         +   + F    Y  + +                     LP     +    
Sbjct: 400 HNCGKKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGTTSLVPEDQLPLRLPHATDIKPSGT 459

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKF 255
            +S L +L+      D   +        M  W  +   YL      ++          K+
Sbjct: 460 PESPLANLTDWVNVVDENGRKGKRETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKKW 519

Query: 256 WPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P DL++ G +    H +Y   +         +    P  +++++ G IL   EK+SKS 
Sbjct: 520 LPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSK 578

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +VI+E G D+LR + +          +D +G                + R   
Sbjct: 579 GNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDWDDNG---------PASTKKFLDRVWR 629

Query: 368 MILKDYD-GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           + + D D   IP      ++D  +  V +  ++++ E+      + A++Q++  ++    
Sbjct: 630 LFVNDLDLKAIPQERIVDKNDGELDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAA-- 687

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                           +A T+     E       LL    P +  +I+ +    DE+  +
Sbjct: 688 ---------------QKAKTIPR---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESITY 728

Query: 487 QSLDQRLKPGFMLHKTFD 504
                   P  ++  T +
Sbjct: 729 AKWPTY-DPAKLVESTVE 745


>gi|227529019|ref|ZP_03959068.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351031|gb|EEJ41322.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 931

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 107/278 (38%), Gaps = 17/278 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 519 FTKETDIMDVWFDSGSSHQGVLAER------DYLTYPADLYLEGSDQYRGWFNSSLITSV 572

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + S + P  + V     +  +G K+SKS GNVIDP +V++++G + +R +++       D
Sbjct: 573 VCSGHAPYKEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVMSADTSA-D 631

Query: 339 GFYDKDGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                   ++       L N    L++ +      +           +  D+ +L   + 
Sbjct: 632 VRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNASENTVSY---EYMSSVDQYMLVKLNH 688

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVE 453
            L+++R +  N     A   +I+ V       Y +  K     +  N     ++  V  +
Sbjct: 689 FLEKMRADFDNYDFLDAYRLLINFVNNDLSAFYMNVAKDVLYIEPENSQTRRSMQTVFYD 748

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           ++  +  LL   +P    +++  +   +E      + +
Sbjct: 749 ILLTMVKLLTPILPHTTEEVWSYMNEPEEFVQLTEIPE 786



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 53/157 (33%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 45  EGKPTFILHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGFRSPYVPGWDTHGLPIEHQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
              AG   K             +  +     R     L +S D      T +K       
Sbjct: 105 LTKAGYDRKKMSLTEFRDLCRKYALEQVDKQRKDFKRLGVSGDWNHPYLTLDKEFEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ + + KG +Y+     ++S   E+   + EV   
Sbjct: 165 RVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 201


>gi|254478485|ref|ZP_05091861.1| leucyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214035574|gb|EEB76272.1| leucyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 727

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 115/323 (35%), Gaps = 41/323 (12%)

Query: 188 LPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDN 247
           LP +   E             ++      G     DP   +  ++D  + Y        N
Sbjct: 361 LPYDVEFEPTGESPLKKHAGFMNVTCPKCGGPALRDPD-TLDTFVD-SSWYYLRYPDNKN 418

Query: 248 PDGSKAKFW-----PADLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHG 294
                 K W     P D +V G +    H +Y             L+ + P    V    
Sbjct: 419 DKEPFNKEWINKMLPVDKYVGGAEHATMHLLYSRFITKVLRDLGYLNFDEPFLSLVHQGT 478

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +   G ++SKS GNVI P + I++ G D  R +L+   +  + G +  +G+K       
Sbjct: 479 ILGPDGSRMSKSRGNVISPDDYIKQYGSDVFRLYLMFGFSYSEGGPWSDEGIKA------ 532

Query: 355 ANGIGNLVSRSVSMILKDYDGMI---PTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              I   V+R    I K  +       T     ++++ +  V    ++ +  +      +
Sbjct: 533 ---IARFVNRVERFIEKFIETRQNPGKTKEEMEDAEKELNYVRHYTIKHVTLDADKFEFN 589

Query: 412 RALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
            A+A+++ LV+ + +Y            N       +    +V+R    +L  F P  + 
Sbjct: 590 TAIARIMELVNALYKY-----------ENEVEVKN-MKFYEDVVRDFVKILAPFAPHFSE 637

Query: 472 KIFDILFVADE--NRCFQSLDQR 492
           ++++ L       N+ +   D++
Sbjct: 638 EMWERLGYEYSVFNQKWPEWDEK 660



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 6/140 (4%)

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  I T    ++   + ++ K+ + G  Y+
Sbjct: 1   KTGIHPYDSTMENIRTMERQLREMGVTFDWDYEIITCLPEYYKWTQWIFLKLYEAGLAYR 60

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   E   +FF+++AY ++LL   +
Sbjct: 61  KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKELTQWFFKITAYAEELLEKLD 116

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I   +
Sbjct: 117 DLDWPEKTKMMQRNWIGKSE 136


>gi|301792292|ref|XP_002931113.1| PREDICTED: valyl-tRNA synthetase-like [Ailuropoda melanoleuca]
          Length = 1265

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 110/376 (29%), Gaps = 48/376 (12%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P  R            
Sbjct: 706  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFITVSDPAVPPGEDPDGRYWVSGRSEAEAR 765

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +     F+P  L   G
Sbjct: 766  EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLTVFYPGTLLETG 823

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 824  HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 883

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 884  QGLHDQLLSSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 943

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +     +      +  D  I S  +  ++   +
Sbjct: 944  ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSEPGDHESLVDRWIRSRLTEAVRLSNQ 1001

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1002 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVVAECARQTLYTCLDVGLRL 1060

Query: 462  LQAFVPKLANKIFDIL 477
            L  F+P +  ++F  L
Sbjct: 1061 LSPFMPFVTEELFQRL 1076



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  V-----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
                                 + ++           L  S D + R   T + +     
Sbjct: 397 WRERGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 455

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 TEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|172039458|ref|YP_001805959.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|254782384|sp|B1WVA3|SYI_CYAA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171700912|gb|ACB53893.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 959

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 76/419 (18%), Positives = 127/419 (30%), Gaps = 48/419 (11%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI--YKGCYSGWYSLRDEAYYND 138
           ++ A      YD   RT +          +  +    D          W   + E     
Sbjct: 403 KEEAYQHKYPYDW--RTKKPTIFRATEQWFASVKGFRDAALTAIKTVQWIPAQGENRITP 460

Query: 139 ---DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
              D        Q       PV + EE                    H + I   +  + 
Sbjct: 461 MVSDRSDWCISRQRSWGLPIPVFYDEETNEPLLT--------EETIKHIQTIFAEKGSDA 512

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                   L                       M VW D+ ++      +           
Sbjct: 513 WWEMSIEALLPDQYKADAHK-----YRKGTDTMDVWFDSGSS------WASVAKQRPELK 561

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PAD+++ G D     F +    +  ++   P    +     +  KG K+SKSLGN++DP
Sbjct: 562 YPADIYLEGSDQHRGWFQSSLLTSVAVNEIAPYKTVLTHGFVLDEKGHKMSKSLGNIVDP 621

Query: 314 IEV---------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
             +             G D LR ++   +    D    K  LK+   +D+   I N   R
Sbjct: 622 NVIINGGKNQKQEPPYGADVLRLWV-SSVDYSSDVPIGKTILKQL--SDIYRKIRNTA-R 677

Query: 365 SVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +   L D+D    T       E D  +L   + V  E+ +  +     R    V +   
Sbjct: 678 FLLGNLHDFDPKKDTVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCV 737

Query: 421 VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V   + Y D  K   L  ++P+  R  +   V    I  LA  +   +  +A  I+  L
Sbjct: 738 VDLSNFYLDIAKD-RLYISHPESIRRRSCQTVLAIAIENLAKAIAPVLCHMAEDIWQFL 795



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 55/153 (35%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------- 59
             +     Y N   H+GHA    + D++ ++  L G  V +  G D HG  I        
Sbjct: 53  FVLHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSM 112

Query: 60  KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           K+ +  G+T        + F  +             +   +++   T    +      ++
Sbjct: 113 KSKEREGLTPLKLRHKARDFALKTQEEQAKGFKRFGVWGDWENPYLTLTPEYEAAQIGVF 172

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +++ KG IY+G     +S   +    + E+  
Sbjct: 173 GEMALKGYIYRGLKPVHWSPSSQTALAEAELEY 205


>gi|146420866|ref|XP_001486386.1| hypothetical protein PGUG_02057 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1115

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 108/276 (39%), Gaps = 12/276 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +PA+    G D     F+ +      L  
Sbjct: 561 EEVFDCWFESGSMPYASRHYPFENKELFMNSFPANFISEGLDQTRGWFYTLTVLGTHLFN 620

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP  V++E G DALR ++++      +   +
Sbjct: 621 TAPYQNVIVTGIVLAADGKKMSKRLKNYPDPNIVLKEYGADALRLYMIKSPVARAETLKF 680

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+++ V++ L          + + ++  KD                 D+ +++    
Sbjct: 681 KEEGVREVVSSVLLPWYNSFKFFNDAANIYQKDNGEKFVYNSKLFSTNVMDKWLMASLQS 740

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK--TNPDRASTVLYVTVE 453
           ++  I + MQ   ++  + +++SL+ ++ + Y        LK    + +     L    E
Sbjct: 741 LIAFIHKEMQAYRLYTVVPKLLSLIDDLTNWYI-RFNRRRLKGLSGDKEDTRVALNTLSE 799

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+  +  F P LA+ I+  L V        SL
Sbjct: 800 ALLTLSRAMAPFTPFLADGIYQRLKVYFTEEDLISL 835



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K+           +    PH GH     + D++ R+  ++G  V+   G D HG  I   
Sbjct: 73  KDFPPFAFFDGPPFATGTPHYGHLLASTVKDIIPRYATMNGHHVVRRFGWDTHGLPIEYE 132

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R     +   I  D+  +T     
Sbjct: 133 IDKKLGITGKHDVMKMGIDKYNAECRAIVMRYADEWRRTVTRIGRWIDMDNDYKTLYPEF 192

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++  K  +YKG     YS       ++ E  +   
Sbjct: 193 MESVWWAFKELYKKDAVYKGLRVMPYSTGLTTPLSNFEAQQNYK 236


>gi|321469961|gb|EFX80939.1| hypothetical protein DAPPUDRAFT_318167 [Daphnia pulex]
          Length = 481

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 79/426 (18%), Positives = 137/426 (32%), Gaps = 60/426 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K YI +   YP+ + H+GH     I+D LARF+R+ G +V+   G D  G     AA
Sbjct: 57  SQNKCYILSMFPYPSGKLHMGHVRVYTISDSLARFYRMQGKEVIHPMGWDAFGLPAENAA 116

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIY 120
            +  +++  +   N    ++    L IS+D    I T    ++   + ++ K+ +KG +Y
Sbjct: 117 ISQNLSSNEWTKSNIEYMKNQLIKLGISFDWQREIATCSPEYYRWTQFIFLKLYEKGFLY 176

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP--VQWMEEEGYFFRLSAYQDKLLS 178
           +                 +E+          +  +P  V W +     F           
Sbjct: 177 QKE--------------PEEIDFSGQKPIEMSTKSPLVVSWEKMSKSKFNG--------- 213

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLS-RKTFDW------GIKIPDDPQY-IMYV 230
                   + P    NE        L    +S R +  W      GI    D  +  M V
Sbjct: 214 --------VEPESVWNEHGIDTTRLLILADVSPRTSRHWSKDTFPGILRWQDRMWATMKV 265

Query: 231 WIDA------LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANL 284
           WID        +     T          A+ +   L  +   I     I      +    
Sbjct: 266 WIDHQRQEGNPSTPAKETLDKQETIWFDARNF--YLKGVTFGIHHSQHISVAISKMQGLT 323

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIE-VIEEVGVDALRYFLVREIACGKDGFYDK 343
              KKV     + +   +  ++LG  I  +  +      +    F+        D  +D 
Sbjct: 324 TALKKVPKGFNLKYS-RQFERALGVQIVMLAPLAPHFASEMWSAFVDNAAKLSDD--FDW 380

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           D      N    +   NL    V          IP      E D+  +S+   +L++  E
Sbjct: 381 DKPVLEQNWPQVDMDYNLELNCVVNNQPACTIKIPRC----ELDKFNVSMALELLKQ-DE 435

Query: 404 NMQNQL 409
                 
Sbjct: 436 LYIKYN 441


>gi|260596444|ref|YP_003209015.1| isoleucyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215621|emb|CBA27886.1| Isoleucyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 938

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 116/359 (32%), Gaps = 41/359 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           VQW+ + G     S   ++          + +P+      E        L+ +    K  
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELHPRTLELMEDVAKRV 500

Query: 215 -DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              GI+   D                    + VW D+ + + +         G       
Sbjct: 501 EQDGIQAWWDLDPRDIMGDDADVYEKVPDTLDVWFDSGSTHSSVVDVRPEFSGHA----- 555

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P +
Sbjct: 556 ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQD 615

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V+ ++G D LR ++       +    D+  + KR     A      +  +   +L + +G
Sbjct: 616 VMNKLGADILRLWVASTDYTSEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLNG 668

Query: 376 MIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYF 428
             P      P      D   +        +I +  +    H  + +++   S      Y 
Sbjct: 669 FDPVKDMVKPEEMVVLDRWAVGCAKAAQDDIVKAYEAYDFHEVVQRLMRFCSIEMGSFYL 728

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 729 DIIKDRQYTAKADSVARRSCQTALYHISEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR 96
            +             +     R+ A   +D    DFIR
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIR 143


>gi|295665324|ref|XP_002793213.1| valyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278127|gb|EEH33693.1| valyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 1051

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 99/303 (32%), Gaps = 47/303 (15%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYW 275
             +  DP  ++  W  +     +T G+  N      K +P  +   G DIL F    +  
Sbjct: 563 FTLKRDPD-VLDTWFSSGLWPFSTLGWPKNTP-DFEKLYPTSVLETGWDILFFWVARMIM 620

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------------------ 317
               ++  +P  +          +G K+SKSLGNVI+PI+VI                  
Sbjct: 621 LGIKMTGKVPFTEVYCHSLIRDSEGRKMSKSLGNVINPIDVIEGIKLQDLHKKLKHGNLA 680

Query: 318 -------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
                               E G DALR+ LV     G D  +D   +         N I
Sbjct: 681 EKEIAMATKYQKKAFPKGIPECGTDALRFALVTYTTGGGDINFDIQVI--HGYRRFCNKI 738

Query: 359 GNLVSRSVSMILKDYDG--MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
                  +  +  D+         G  + S+  IL   ++  +   E+++++    A + 
Sbjct: 739 YQATRYVLGKLGDDFKPQASPTKTGKESLSERWILHKFNKAAKVANESLESRDFSVAAST 798

Query: 417 VISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +         D + +  K         +   +        +     L+   +P +  +++
Sbjct: 799 LYQYWYSQLCDVFIENSKSLLQPDVPAEVQQSAKETLYTALEGALTLIHPTMPFITEELW 858

Query: 475 DIL 477
             L
Sbjct: 859 QRL 861



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +KE+ K  I           H+GH     + D + R+ R+ G  VL+  G D  G     
Sbjct: 123 VKEKGKFVIPIPPPNVTGDLHMGHGLTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQS 182

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKR 101
             +     T                   +  +   +       L  S+D      T ++ 
Sbjct: 183 VVEKILWKTEGKSRHDVGREVMTNMIWDWTHKYHDSITTTLKRLGGSFDWTREAFTMDEN 242

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYS 129
                   + ++ ++G IY+      + 
Sbjct: 243 LSAAVTETFVRLHEEGIIYRENRLVNWC 270


>gi|315038959|ref|YP_004032527.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312277092|gb|ADQ59732.1| leucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 804

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +   Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  NKNNYYALDMFPFPSGKGLHVGHPEGYTATDIVARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 L-DGLDWPEPVKEMQRNWIGRSVG 226



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/464 (16%), Positives = 147/464 (31%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  DI+ + F     +            +
Sbjct: 329 YGTGAVMAVPAHDDRDYAFATKFGLPINPVLEGGDITKEAF----TEDGPHINSEFLNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + +    K           E   N          Q Y  +  PV   E+           
Sbjct: 385 NIEDAKKKMVDWLEDHNCGEKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                         LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      ++    D    K W P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNDKELADYDLLKQWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   IP      ++D  +  V +  +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGELDKVYAETVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+      + A++Q++  ++                    +A T+     E       
Sbjct: 664 VTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166229756|sp|A2BP36|SYI_PROMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 968

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 134/413 (32%), Gaps = 58/413 (14%)

Query: 120 YKGCYSGWYSLRD-EAYYNDDEVYKGADGQYYNAQHNP--VQWMEEEGYFFRLSAYQDKL 176
           YK  Y   +  +    +   ++ +   +G   +A      V+WM   G     S    + 
Sbjct: 420 YKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALQAIEDVEWMPATGKKRIYSMVVGRG 479

Query: 177 LSYYESHPEFILPIERR----------NEVISFVKSGLKDLSLSRKTFDWGIK------- 219
                    + +PI             N  I      L     +   +DW +K       
Sbjct: 480 DWCISRQRSWGVPIPVFYKKNGNDILLNSEIINHIQELFSEHGADIWWDWDVKNLLPEKY 539

Query: 220 -----IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                +       M VW D+ ++      +    +      +PADL++ G D     F +
Sbjct: 540 ARESDLWKKGTDTMDVWFDSGSS------WAAVCELRSELKYPADLYLEGSDQHRGWFQS 593

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE---------VGVD 323
               +  ++   P  K +     +   G K+SKSLGNV+DP  +I            G D
Sbjct: 594 SLLTSVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTEPAYGAD 653

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            LR ++           Y  D             +   V  +   +L +     P   ++
Sbjct: 654 VLRLWVSS-------VDYSVDVPIGSNILKQLADVYRKVRNTARYLLGNIHDYDPNIDSY 706

Query: 384 T-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL 436
                   D+ +L     V  +I    +N    +    + S   V   + Y D  K    
Sbjct: 707 EIDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLY 766

Query: 437 KKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQ 487
             +    R  +  +V  +V+  LA+L+   +  +A  I+  + ++  E   FQ
Sbjct: 767 VSSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYLTKEKSVFQ 819



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 16/152 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK-- 70
             Y N   H+GHA   ++ D++ ++  L G  V +  G D HG  I         + +  
Sbjct: 67  PPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNLKSDERK 126

Query: 71  ------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
                        +      N  +      I   +D+   T +K +      ++ K+   
Sbjct: 127 NLDTLNLRKKATDYAHIQINNQMEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFGKMFLN 186

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           G IY+G     +S        + E+    +  
Sbjct: 187 GYIYRGLKPVHWSPSSRTALAEAELEYPDEHY 218


>gi|289628912|ref|ZP_06461866.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646874|ref|ZP_06478217.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 499

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 124/377 (32%), Gaps = 39/377 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D+    + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDFQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGVDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+   +  Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTGLHCKLCRQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    F +L+ ++  L                 +  +      L D  ++R   D G+ 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLSALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKK 348
                 +G +     + 
Sbjct: 358 IAPEQSEGDFRLTHFRA 374


>gi|328881779|emb|CCA55018.1| Isoleucyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 1045

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/402 (13%), Positives = 123/402 (30%), Gaps = 15/402 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G++ +   N V W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAVKDRLLAENERTNWFPESVKHGRFGDWLTNNVDWAL 454

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               ++        +    + H   +       E+    +S L           +     
Sbjct: 455 SRNRYWGTP---LPIWRCEDGHLTCVGSRAELTELTGTDQSELDPHRPYIDAVTFDCPSC 511

Query: 222 DDPQ----YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 512 AKTATRVPEVIDAWYDSGSMPFAQYGYPYENKELFESRYPAQFISEAIDQTRGWFYTLMA 571

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN++ PI ++++ G DA+R+F+    + 
Sbjct: 572 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSP 631

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++      +      P        D+ +LS 
Sbjct: 632 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSAADPAPADRPVLDKWLLSE 691

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
            + ++ E  E M++    R    + + V ++  ++  +      + +     T      +
Sbjct: 692 LNTLVAETTEAMESYDTQRTGKLISAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHD 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           V+  +  L+    P +  +++  L V       +S+     P
Sbjct: 748 VVETVTRLMAPLTPFITERVWQDLVVPVSPDAPESVHLATWP 789



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +   +  DD  RT +  +
Sbjct: 100 VEKELGFSGKKDIEEYGIAAFNDKCRESVTRHTDAFAELTTRMGYWVDLDDAYRTMDPSY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I DK  + +      +  R     +D E+ +G +
Sbjct: 160 IESVWWSLKQIFDKDLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|330985496|gb|EGH83599.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 499

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 121/372 (32%), Gaps = 29/372 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGVDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNP-VQWMEEEGYFFRLSAYQD 174
             +           EA+   +  Y GAD    Q  N    P  + M            Q 
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGADSDASQCENCAQAPDAELMTSLHCKLCRQPSQW 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGI--------KIPDDP 224
           K             P  R   +    +  L +          DWG+         +  D 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKPLDNWLRDTLEHLHDWGVTRPGDGGLDLQADG 242

Query: 225 QYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWPA 277
              ++ W   L  Y+       +         ++W +     +H +G D +  HAI +PA
Sbjct: 243 SCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHAIVYPA 302

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L       
Sbjct: 303 QLSALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLASIAPEQ 362

Query: 337 KDGFYDKDGLKK 348
            +G +     + 
Sbjct: 363 SEGDFRLTHFRA 374


>gi|293379839|ref|ZP_06625961.1| leucyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290923611|gb|EFE00492.1| leucyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 804

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 133/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    +           +   N          Q Y  +  PV   E+
Sbjct: 374 KHFNSEFLDGLDNEEAKKRMIEWLEDHNCGKKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L+      D   +   
Sbjct: 434 GTTSLVPED-----------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDENGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++          K+ P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      ++D  
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGE 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+      + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|261328970|emb|CBH11948.1| valyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 975

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 77/469 (16%), Positives = 138/469 (29%), Gaps = 106/469 (22%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
           H T    +K +       +          ++     + V         +   + V+ +  
Sbjct: 328 HVTTEGPFKGMHRFDCRREIVKE-----LEKMGLLREVVPYEYRVGRCSRTGDIVEPLLM 382

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI-- 220
             +F   +    K +    ++   + P   +     +++  +K   +SR+   WG +I  
Sbjct: 383 PQWFVDCTEMARKSVEAVRNNELRLYPPTHQVVWYHWLE-NIKPWCVSRQ-LWWGHRIPA 440

Query: 221 ----------PDDPQ---------------------------------YIMYVWIDALTN 237
                      +DP                                   ++  W  +   
Sbjct: 441 YKCTGAVPSTHEDPWVVARNLEEAKAKAKEKFNLSDAEVRELVLEQDSDVLDTWFSSAMW 500

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
             +T G+      +  +F+P  L   G DIL F    +   +   +  LP  +       
Sbjct: 501 PFSTMGWPAETGDT-QRFFPGSLMETGHDILFFWVARMVMTSLHFTGKLPFSEVFLHAMV 559

Query: 296 ILHKGEKISKSLGNVIDPIEVI-------------------------------------E 318
               GEK+SKS GNVIDP+ +I                                      
Sbjct: 560 RDKNGEKMSKSKGNVIDPLFIISGVSLEALHDTVRSGNLDEKEVSRALKLQRETFPNGIP 619

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-KDYDGM- 376
           E G DALR+ L+     G++   D D +       L N + N V   +   L +DY    
Sbjct: 620 ECGSDALRFGLLSYTQSGRNVNLDIDRVVA--YRQLCNKLWNAVRFVLYHALGEDYKPKA 677

Query: 377 ----IPTPGAFTESDESILSVCSRVLQEIRENMQN--QLIHRALAQVISLV--SEVDRYF 428
                    +       ILS     ++E              A   V         D Y 
Sbjct: 678 TLVDSQKVASLPLECRWILSRLDVAVEECTRGFSEGTYDFALATNAVYRFWLYELCDVYL 737

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  KP    +   ++   V  V + V+     LL   +P L  +++  L
Sbjct: 738 ELTKP--TIQAGGEKKVIVQDVLLHVVEVALRLLHPMMPFLTEELWHYL 784



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 19/156 (12%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               I +         HIGHA    + D L RFHR+ G D L+  GTD  G       + 
Sbjct: 44  RSFVIVSPPPNVTGHLHIGHALTGAVQDALIRFHRMKGDDTLYLPGTDHAGIATQVVVEK 103

Query: 65  AGVTT---------------KVFVDQ--NSRNFRDMADVLDISYD--DFIRTTEKRHHDT 105
             +                 +V+  +  +          + +S D      T +++    
Sbjct: 104 RLMKESGKSRHDVGREEFLKQVWAFKENHCGVITRQLRRIGLSLDWSRERFTMDEQCAKA 163

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
               + K+ + G IY+      +    ++  +D EV
Sbjct: 164 VVEGFVKLHEDGLIYRATRLINWCCSLQSAISDLEV 199


>gi|149236289|ref|XP_001524022.1| isoleucyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452398|gb|EDK46654.1| isoleucyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 720

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 107/289 (37%), Gaps = 25/289 (8%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y           +PA+    G D     F+ +      L  
Sbjct: 165 EEVFDCWFESGSMPYASKHYPFENKQKFLDAFPANFISEGLDQTRGWFYTLTVLGTHLFN 224

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP  ++E+ G DALR +L+       +   +
Sbjct: 225 TAPYQNVIVTGIVLAADGKKMSKRLKNYPDPTLLLEKYGADALRLYLINSPVLRAETLKF 284

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+K+ V + L         +  S  +  K+                 D  +L+    
Sbjct: 285 KEEGVKEIVTSVLLPWYNSYKFLKDSADLFEKNTGDKFIYSADLKSDNVMDRWLLASIQS 344

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVL---YVTV 452
           ++Q I E M+   ++  + +++  + ++ + Y        +K  + D  +          
Sbjct: 345 LIQFIHEEMKGYRLYTVVPRLLQFIDDLTNWYI-RFNRRRIKGYSSDDVNDTKNGLNTLA 403

Query: 453 EVIRQLAILLQAFVPKLANKIFDI------------LFVADENRCFQSL 489
           E +  L+  +  F P LA+ I+              + V  E + F+S+
Sbjct: 404 EALLILSRAMAPFTPFLADGIYQRIRQFFTDDYLTKIGVNPEAKEFESV 452


>gi|302131114|ref|ZP_07257104.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 499

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 130/391 (33%), Gaps = 40/391 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     P    HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPKGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV   V   +NS         ++I  D+++R             ++  + D G     D
Sbjct: 63  QGVDPVVLAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAKAVGEVFTALRDAGAIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+      Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
                 F +L+ ++ +L +                  +      L D  ++R   D G+ 
Sbjct: 183 KTAHRAFLKLADFKPQLGNRLLGQAWRKPLDSW----LRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQVDGACRVHTWFMGLAGYMAAFREYADSIGRPELFGQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA   +   + + ++   + F+   G  +S S  + I   ++  +   D+ R +L  
Sbjct: 298 IVYPAQLSVLQGIKVRQRFVPNQFLKLDGLNLSTSRNHAIWVGDLARQACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                 +G +      +    +L NG    +
Sbjct: 358 IAPEDSEGDFRMTHFLE-WREELFNGFFPAL 387


>gi|254432512|ref|ZP_05046215.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626965|gb|EDY39524.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 990

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/332 (18%), Positives = 114/332 (34%), Gaps = 38/332 (11%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
                ++GL    L+ +   W           M VW D+ +++             +   
Sbjct: 531 WWERDEAGLLPPELADQADQW-----RKGTDTMDVWFDSGSSWAGVLQ-------ERGLR 578

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PADL++ G D     F +    +  ++   P  + +     +  KG K+SKSLGNV+DP
Sbjct: 579 YPADLYLEGSDQHRGWFQSSLLTSVAVNGEAPYRRVLTHGFTLDEKGRKMSKSLGNVVDP 638

Query: 314 ---------IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
                     +     G D LR ++   +    D       +K+   AD+   + N   R
Sbjct: 639 AVLVEGGRNEKQEPAYGADVLRLWV-SSVDYSADVPLGPGIVKQL--ADVYRKVRNTA-R 694

Query: 365 SVSMILKDYDGMIPTPG-------AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
            +   L D+D      G            D+ +L   + ++  +  +      +R    +
Sbjct: 695 YLLGNLHDFDPRPAAAGGHAIPLEELPLLDQWMLQRTAALVDAVSGDFGRYEFYRFFQAL 754

Query: 418 ISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +   V   + Y D  K         D R  +   V   V+ +LA L+   +  +A  I+
Sbjct: 755 QNFCVVDLSNVYLDIAKDRLYVSAAGDFRRRSCQTVLSLVVERLAGLIAPVLCHMAEDIW 814

Query: 475 DILFVA-DENRCFQSLDQRLKPGFMLHKTFDP 505
             L     E   F+         +   +   P
Sbjct: 815 QNLPYPVAEASVFERGWPTAPAAWRQPELEPP 846



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 16/147 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-------KAAQNA 65
             Y N   H+GHA   I+ D++ +   L G    F  G D HG  I        K+++ A
Sbjct: 62  PPYANGALHVGHALNKILKDIINKTALLQGRRARFVPGWDCHGLPIELKVLQGLKSSERA 121

Query: 66  GVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDK 116
            +T          +  +     +       I   ++    T +K +      ++  +   
Sbjct: 122 ALTPLGLRHKAHAYALEQVEGQKAGFQRWGIWADWEQPYLTLQKSYEAAQIGVFGAMVLA 181

Query: 117 GDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           G IY+G     +S        + E+  
Sbjct: 182 GHIYRGLKPVHWSPSSRTALAEAELEY 208


>gi|295693491|ref|YP_003602101.1| leucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031597|emb|CBL51076.1| Leucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 804

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 134/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    +           +   N          Q Y  +  PV   E+
Sbjct: 374 KHINSEFLDDLDNEEAKKRMIEWLEDHNCGKKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L+      D   +   
Sbjct: 434 GTTSLVPED-----------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDENGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++          K+ P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  K +++ G IL   EK+SKS GNV++P EVI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPFQK-LYNQGLILKNHEKMSKSKGNVVNPDEVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      ++D  
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGE 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+ ++   + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVSEDFESLHFNTAISQMMVFMNAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|284802465|ref|YP_003414330.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995607|ref|YP_003417375.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058027|gb|ADB68968.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061074|gb|ADB72013.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 921

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 108/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  A       E D+ ++  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFHPTTNAVSYKNLREVDKYMMIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|253690014|ref|YP_003019204.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511510|sp|C6DF04|SYI_PECCP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|251756592|gb|ACT14668.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 937

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 132/399 (33%), Gaps = 42/399 (10%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGY 165
           K +    +  +  Y   +  +    +       V     G    +  +   VQW+ + G 
Sbjct: 390 KGMLLHVEKLQHSYPCCWRHKSPIIFRATPQWFVSMDQKGLRKQSLSEIKGVQWIPDWGQ 449

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               +   ++          + +P+     +  E +    + L +    R     GI+  
Sbjct: 450 ARIEAMVANRPDWCISRQRTWGVPMSLFVHKETEELHPRTAELIEAVAKRVE-ADGIQAW 508

Query: 222 DDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            D                    + VW D+ + + +         G       AD+++ G 
Sbjct: 509 WDLDPADVLGADADNYVKVPDTLDVWFDSGSTHASVVDVRPEFGGHA-----ADMYLEGS 563

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D
Sbjct: 564 DQHRGWFMSSLMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGAD 623

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPG 381
            LR ++      G+    D+     + +AD    I N   R +   L  +D       P 
Sbjct: 624 ILRLWIGSTDYSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPQKDSVKPE 679

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +       +EI E  ++   HR + +++   S      Y D  K  +   K
Sbjct: 680 DMVVLDRWAVGCAKAAQEEILEAYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           ++     +       +   L   +   +   A++I+  L
Sbjct: 740 SDSVARRSCQTALYHISEALVRWMAPIMSFTADEIWSYL 778



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAECRKYAAEQVAGQKADFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 166 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 202


>gi|167856258|ref|ZP_02478991.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852615|gb|EDS23896.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 938

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 124/394 (31%), Gaps = 47/394 (11%)

Query: 119 IYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQ 173
             K  Y   +  +    +    + + G + Q    Q       V+W+   G     +   
Sbjct: 398 RIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRKQALGEIKRVRWIPSWGEARIDTMVA 457

Query: 174 DKLLSYYESHPEFILPIER--RNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQ----- 225
           ++          + +P+     NE        L+ L    K     GI+   D       
Sbjct: 458 NRPDWCISRQRTWGVPMTMFVHNETEQLHPRTLEILEEVAKRVEQAGIQAWWDLDPKEVL 517

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G+      AD+++ G D     F 
Sbjct: 518 GEEDAKIYRKVPDTLDVWFDSGSTYASVVQQRPEFNGNS-----ADMYLEGSDQHRGWFM 572

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +       P  + +     +  KG K+SKSLGNVI P EV  + G D LR ++  
Sbjct: 573 SSLMLSTATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVILPSEVWNKNGADILRLWVAS 632

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
                    Y  +        + A      +  +   +L + +G  P      P      
Sbjct: 633 -------TDYTGEIAVSHNILNSAGDTYRRIRNTARFLLANLNGFDPKRDLVKPEEMIAL 685

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +S       +I+E   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 686 DRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLA 745

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 746 RRSCQTALWHISEALVHWMAPILSFTADEIWGYL 779



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 16/207 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   H+GHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKRSFILHDGPPYANGNIHLGHAVNHILKDIINKSKTAMGFDTPYVPGWDCHGLPIELK 105

Query: 62  AQ------NAGVTTKVFVDQNSRNFRDM-------ADVLDI--SYDDFIRTTEKRHHDTC 106
            +      N  ++T  F  +     ++           L I   +D+   T         
Sbjct: 106 VEGLVGKPNENISTAEFRQKCREYAKEQVDGQKADFMRLGILGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD-GQYYNAQHNPVQWMEEEGY 165
                K+   G +YKG     + L   +   + EV            + + V  +  E  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFSAVDPVAVEAK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIER 192
           F        ++ +   +   + LP  R
Sbjct: 226 FNAQGKGSGQISAVIWTTTPWTLPSNR 252


>gi|139473464|ref|YP_001128180.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271711|emb|CAM29944.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 933

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYEFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +++ ++  LL   +P    +I+  L    E
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYLEYESE 776



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|295105908|emb|CBL03451.1| Isoleucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 945

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/453 (14%), Positives = 142/453 (31%), Gaps = 23/453 (5%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVF---VDQNSRNFRDMADVLDI--SY 91
           +      DV      D++G    +A   AG+        + +  R    +     I  SY
Sbjct: 342 YLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDVDEANPAIIEWLRERGTLMAEKKILHSY 401

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               R  E          +  +           +  + +     +  + +      +   
Sbjct: 402 PHCWRCHEPVIFRATDQWFVSMDKNSLREDALDAIDHKVEFIPAWAKNRIGSMVADRPDW 461

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  W       F+ +   + + +         L   R      F     + L    
Sbjct: 462 CISRQRSWGVP-IPVFKCAKCGNTVATAETFDAVIDL-FYREGADAWFTHEPSEYLPRGV 519

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G       + I+ VW ++  ++ +           +   +PAD+++ G D     
Sbjct: 520 KCETCGCSELIPEKDILDVWWESGVSHTSVLK----HRADEGLRFPADMYLEGSDQHRGW 575

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +       P    +     +  +G+K+SKS GN +DP +V+ + G D LR ++
Sbjct: 576 FQSSLLTSMGAYGVPPYKSVMHCGFTMDAEGKKMSKSAGNGVDPADVMAKSGADVLRLWV 635

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD---GMIPTPGAFTES 386
                  +D     + L++   ++    I N + R +   L D+D     +    A    
Sbjct: 636 ASVDYS-QDVNIGDEILER--TSEAYRRIRNTM-RFLLGSLSDFDDLKHTVTDWNALEPV 691

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT-NPDR 443
           D+  +     +L ++         H     V   +       Y DA K     +  +  R
Sbjct: 692 DQWAMVRLWHLLVDVERAYDEYKFHMVYRAVYDYIVGDLSAVYMDATKDRVYSEAPDSPR 751

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                 V + ++  L  +L   +    +++++ 
Sbjct: 752 RRAAQTVLMNIVEVLVRVLAPVLSFTTDEVWEH 784



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N   HIGHA+  I+ D + + H   G    +  G D HGQ I   
Sbjct: 39  KDGKPFILHDGPPYANGPIHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHM 98

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDT 105
            +      K               + ++     R+    L ++ D      T    +   
Sbjct: 99  VEKTLGPEKMAKIDQPTLRRLCREWAEKYVDVQREGFKRLGVNGDWEHPYLTFTPNYEAG 158

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              ++KK+   G +Y+G     +  R      + E+  
Sbjct: 159 NVEVFKKMYLDGSVYRGRKPIHWCKRCHTALAEAEIEY 196


>gi|256843734|ref|ZP_05549222.1| leucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256615154|gb|EEU20355.1| leucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 804

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    + 
Sbjct: 28  DKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRKNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 134/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    +           +   N          Q Y  +  PV   E+
Sbjct: 374 KHFNSEFLDDLDNEEAKKRMIEWLEDHNCGKKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L+      D   +   
Sbjct: 434 GTTSLVPED-----------QLPLRLPHATDIKPSGTPESPLANLTDWVDVVDENGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++          K+ P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      E+D +
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDENDGT 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+      + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVTEDFDALHFNTAISQMMVFMNAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESITYAKWPTY-DPAKLVESTVE 745


>gi|328465026|gb|EGF36305.1| leucyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 788

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++   + +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +         + +   I   +
Sbjct: 204 DLDLVDWPENIKDMQRNWIGRSE 226



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 147/455 (32%), Gaps = 79/455 (17%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            ++R  +  +      + + + GD+ K  ++G     +  + N     + +    D    
Sbjct: 341 HDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEK 400

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
               +         + F    Y  + +                    +LP     +    
Sbjct: 401 EGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGT 460

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L       D   +        M  W         Y+         D  K   W
Sbjct: 461 GESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNSEAIADKEKLAEW 520

Query: 257 -PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P D+++ G +    H +Y   +         +    P  K       +    EK+SKS 
Sbjct: 521 LPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSR 580

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P EV+E+ G D LR + +          ++++GL+         G    + R   
Sbjct: 581 GNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLE---------GARKFLDRIWR 631

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++   +         T+++ ++      +++ +  + +N   +  ++Q++  ++E  + 
Sbjct: 632 LLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYK- 688

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF--------- 478
                             T+    VE       LL    P LA ++++IL          
Sbjct: 689 ----------------QDTIPKQYVEGF---VQLLSPIAPHLAEELWEILGHTETISYVA 729

Query: 479 ---------VADENRCFQSLDQRLKPGFMLHKTFD 504
                    V DE      ++ ++K    + K+ +
Sbjct: 730 WPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLE 764


>gi|330818072|ref|YP_004361777.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370465|gb|AEA61821.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 945

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +              A  +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDALQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVSNRLGAEIVRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAAEWLEIDRYAIAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P      +       V + L 
Sbjct: 722 HYEKYEFHPIVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPASPARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            +L  F+   A + + +   A E
Sbjct: 781 RVLAPFLSFTAEEAWKVFQPASE 803



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 12/153 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 55  GRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQI 114

Query: 63  QNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           +                + +  +     +     L +   + +  +T   ++        
Sbjct: 115 EKQFGKSLPAAEVQKKARAYATEQIEKQKVGFKRLGVLGDWKNPYKTMNFQNEAEELRAL 174

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            KI  KG +Y+G     +     +   + EV  
Sbjct: 175 GKIIGKGFVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|330890057|gb|EGH22718.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 499

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 127/377 (33%), Gaps = 39/377 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R        +     +  + + G     D
Sbjct: 63  QGVDPVELAGRNSDCIEASLAAINIKPDNWMRPHNNPWFAEAVGEGFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD-------------------GQYYNAQHNPVQW 159
             +           EA+   +  Y GAD                   G +      P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGADSDASQCENCAQAPDAELMTGLHCKLCRQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    F +L+ ++  L                 +  +      L D  ++R   D G+ 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQVDGSCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA LL+      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLLALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKK 348
                 +G +     + 
Sbjct: 358 IAPEQSEGDFRLTHFRA 374


>gi|126173298|ref|YP_001049447.1| isoleucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166229767|sp|A3D1G5|SYI_SHEB5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125996503|gb|ABN60578.1| Isoleucyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 940

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 131/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   SR     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVASRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEAEQYRKVTDTLDVWFDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFEPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E  +    H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALYLISEAMVRWIAPILSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVSMVIWTTTPWTLPANR 251


>gi|41054027|ref|NP_956190.1| isoleucyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|34783803|gb|AAH56826.1| Isoleucyl-tRNA synthetase [Danio rerio]
          Length = 1271

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 95/282 (33%), Gaps = 21/282 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 523 VFDCWFESGSMPYAQVHYPFENRREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKP 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP  +++  G DALR +L+       ++  + +
Sbjct: 583 PFKNVIVNGLVLASDGQKMSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKE 642

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF------------TESDESIL 391
           +G++  +              +   ++++   +    G                 D+ I 
Sbjct: 643 EGVRDVLKDVFLPWY-----NAYRFLVQNVQRLQKEEGVEFLYNERTSSVSNNIMDKWIQ 697

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYV 450
           S    ++Q  R+ M    ++  + +++  V    + Y    +     ++  +     L  
Sbjct: 698 SFTQSLIQFFRDEMGAYRLYTVVPKLVKFVDMLTNWYVRMNRRRLKGESGSEDCVRALET 757

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
              V+  +  L+  F P +   ++  L    +    +  D  
Sbjct: 758 LFSVLFSMCRLMAPFTPFITELMYQNLRHLLDPAAVEEKDTG 799



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ RF   +G  V    G D HG  +   
Sbjct: 36  KSRPRFTFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQNGFHVERRFGWDCHGLPVEYE 95

Query: 62  AQN--AGVTTKVFVDQNSRNFRDMADVLDISYDDF-----------------IRTTEKRH 102
                     +  +      +      + + Y D                   +T     
Sbjct: 96  IDKSLNIKGPEDVMKMGIEEYNKQCRSIVMRYADEWENSVRRMGRWIDFRNDYKTLYPWF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   ++K++ D G +Y+G     +S       ++ E  +   
Sbjct: 156 METVWWVFKQLYDSGLVYRGVKVMPFSTACNTPLSNFEANQNYK 199


>gi|33519516|ref|NP_878348.1| valyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666719|sp|Q7VQT2|SYV_BLOFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|33517179|emb|CAD83561.1| valyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 966

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 131/401 (32%), Gaps = 83/401 (20%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
             ++ M  + +F +      + ++   +     +P    N  + ++   ++D  +SR+  
Sbjct: 384 TIIEPMLTDQWFIKTKFLAKQAINAVTNEKIKFIPKNYTNIYLQWMNE-IQDWCISRQ-I 441

Query: 215 DWG--IKIPDDPQYIMYV----------------------------WIDALTNYLTTTGY 244
            WG  I +  D    +YV                            W  +     ++ G+
Sbjct: 442 WWGHRIPVWYDNNNTIYVGHCEKDIRIKNQLNKDIQLSQDNNVLDTWFSSSLWTFSSLGW 501

Query: 245 LDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKKVFSHGFI 296
             N    K    P ++ + G DI+ F         +         A +P  K   +    
Sbjct: 502 PKNNTLLKMFH-PTNIIISGFDIIFFWIARMIMMTMYLVKDQNNNAQIPFKKIYITGLMR 560

Query: 297 LHKGEKISKSLGNVIDPIEVIEE------------------------------------- 319
              G+K+SKS GN IDPI++I+                                      
Sbjct: 561 DKFGQKMSKSKGNGIDPIDIIDGISKKKLLKKQLKENSQSKSISSIIKYINTQFPNGIKP 620

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIP 378
            G D LR  L    + G+D  +D   L+   N    N + N+    ++      YD    
Sbjct: 621 YGADTLRLTLTALASSGQDIHWDMHKLESYHN--FCNKLWNVSKFVITHTDNYHYDIDTK 678

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL 436
               F+ SD  I S   + +Q+  + + +      +  +   +     D Y +  KP   
Sbjct: 679 NKKIFSLSDRWITSKLHQTIQKFSQALNDYRFDHTVNILYEFIWHQFCDWYIEFTKPILY 738

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             TN  +  +  Y  +  +  +  L    +P +  KI+  +
Sbjct: 739 HSTNTLQLISTRYTLITSLESILRLSHPIIPFITEKIWQKI 779



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 19/176 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           ++   I           H+GHA++  I D+L R+ R++G +VL+ +G D  G       +
Sbjct: 38  KKNYCIMMPPPNITGGLHLGHAFQQTIMDILVRYQRMNGKNVLWASGLDHAGIATQILIE 97

Query: 64  NAGVTTKVFVDQNSRNF---RDMADV----------------LDISYDDFIRTTEKRHHD 104
                 K  +  N       +++                     +S+ +   T +     
Sbjct: 98  KNFYNKKNSIKDNHDPHSLIKEVWLWKEKSEKFINYQIKRLGHSVSWKNKHFTMDPEISL 157

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             +  + ++     IYKG     +  + +   +D EV       +       +++ 
Sbjct: 158 AVKEAFIQLYTNNLIYKGKQLVNWDSKLQTAISDLEVSHKQKSDFIWYIQYQLEYN 213


>gi|12045122|ref|NP_072933.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|2507608|sp|P47508|SYL_MYCGE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3844862|gb|AAC71488.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078891|gb|ABY79509.1| leucyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 792

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 84/204 (41%), Gaps = 4/204 (1%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K Y+     YP+A   H+GH     I DV++R+++  G +V+   G D  G    +
Sbjct: 27  SNKKKYYVLDMFPYPSAAGLHLGHVRAYTITDVISRYYKAKGFNVIHPIGFDAFGLPAEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILWKKISDKGD 118
            A N+      + DQN  NF +        YD  +   TT+ R++   + ++ ++     
Sbjct: 87  YAINSNQNPGSWTDQNINNFINQLTSFGFDYDYHLSLKTTDPRYYKYTQWIFSELFKANL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGYFFRLSAYQDKLL 177
                    +  +      ++EV   ++G   + + +  V+  + + +  +++ + D LL
Sbjct: 147 AELVDIDVNWCEQLGTVLANEEVLIDSNGNAVSERGSFSVEKRKMKQWVLKITTFADALL 206

Query: 178 SYYESHPEFILPIERRNEVISFVK 201
              ++        E +   I   K
Sbjct: 207 EGLDTLDWPEPIKEMQRNWIGKSK 230



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 118/348 (33%), Gaps = 50/348 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFF-RLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                Q Y  +  P+ + E            +  LL  Y+       P+ R    ++ VK
Sbjct: 406 WIFSRQRYWGEPFPIIFDENNTPHLVEQLPVELPLLENYKPDGSGNSPLMRNQAWVNIVK 465

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
             +     +     W         Y+M +      N                ++ P DL+
Sbjct: 466 DNIHYQRETNTMPQWAGSCWYYLGYLMLI-----KNPNFWPIDSKEAKKLFDQYLPVDLY 520

Query: 262 VIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           V G +    H +Y   +         +S   P  K +     +   G+K+SKS GN I+P
Sbjct: 521 VGGAEHAVLHLLYARFWHKFLFDKKLVSTKEPFQKLINQGMVLGPDGKKMSKSKGNTINP 580

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             +++  G DALR +L+          ++ +GL         NG+   + R  +     +
Sbjct: 581 TPLVDSHGADALRLYLMFMGPISASLTWNDEGL---------NGMRRWLDRVYNFF---F 628

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
           +  + T     E+    +   +  L+    ++    ++  +++++  ++           
Sbjct: 629 NHAVVTDQVSQET----IFAYNLFLKNSYCHLDKHELNLVISEMMIFLNF---------- 674

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
             L KT          +++   +    +L  F P LA ++ +   +  
Sbjct: 675 --LYKTKK--------ISLNYAKGFLTVLSFFAPFLAEELNEKCGLEP 712


>gi|126632628|emb|CAM56332.1| novel protein similar to vertebrate valyl-tRNA synthetase 2-like
           (VARS2L) [Danio rerio]
          Length = 861

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 131/406 (32%), Gaps = 66/406 (16%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
           + + +    E+ K A           +     + +   LS   D  +S        I   
Sbjct: 402 KKQWFVRCQEMAKKAVQAVEEGDLQIIPQFYSKMWKSWLSNISDWCVSRQLWWGHQIPAY 461

Query: 191 ERRNEVISFVKSGLKDLSLS------RKTFDWG-----IKIPDDPQYIMYVWIDALTNYL 239
               +     +        S      R T  +G     I +  DP  ++  W  +     
Sbjct: 462 RVTLQNSMNTEEEHWVWGRSAAEAQQRATIKFGVNPEAITLTQDPD-VLDTWFSSGLFPF 520

Query: 240 TTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFIL 297
              G+         +F+P  +   G D++ F    +      L+  LP  + +F      
Sbjct: 521 AMLGWPQQTK-DLTQFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFKQVLFHSLVRD 579

Query: 298 HKGEKISKSLGNVIDPIEVI-------------------------------------EEV 320
             G K+SKSLGNVIDP++VI                                      E 
Sbjct: 580 KYGRKMSKSLGNVIDPLDVISGVSLERLQEKVKEGNLDPRESIVAIEAQKKDFPKGIPEC 639

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G DALR+ L    A G+D       +         N +   V  +++ +    D  +PTP
Sbjct: 640 GTDALRFALCSYRAQGEDISLSMSHVLS--CRHFCNKMWQTVRFTLATLN---DASLPTP 694

Query: 381 GA----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPW 434
            A     +  D+ I S     ++E  +  ++  +H   + + S       D Y ++ KP 
Sbjct: 695 LAETYPLSSMDKWICSRLYSTVKECEQGFESYELHTVTSALHSFWLHCLCDVYLESIKPL 754

Query: 435 ELKKTNPDRA---STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              +   +R         V    +     LL  F+P L  +++  L
Sbjct: 755 LKPEGCEERVGERQVATSVLYHSVSVSLALLSPFMPFLTEELWQRL 800



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           +   +           H+GHA  + I D LAR+ R+ G  VL+  G D  G         
Sbjct: 63  KHFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCDHAGIATQSVVER 122

Query: 60  ----------KAAQNAGVTTKVFVDQNSR--NFRDMADVLDISYDDFIR---TTEKRHHD 104
                     +         +V++ +N +          L  S D + R   T +     
Sbjct: 123 KLLREQGKSRQDFSREEFLKQVWMWKNEKGDEIYHQLRKLGASLD-WSRACFTMDPAFSS 181

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + ++ D G IY+      +S   E+  +D EV
Sbjct: 182 AVTEAFVRLCDSGLIYRAEGLINWSCTLESAISDIEV 218


>gi|94990768|ref|YP_598868.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544276|gb|ABF34324.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 933

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 104/281 (37%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|297537731|ref|YP_003673500.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257078|gb|ADI28923.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 939

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 94/279 (33%), Gaps = 23/279 (8%)

Query: 226 YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSAN 283
           Y + VW D+   +                 +PADL++ G D     F +       +   
Sbjct: 543 YTLDVWFDSGATHAAVLKRRP------ELAFPADLYLEGSDQHRGWFQSSLLTGCAIDGR 596

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P    +     +   G K+SKS GNV+ P +V++  G D LR +       G+      
Sbjct: 597 APYNALLTHGFVVDGAGHKMSKSKGNVVAPQKVMDTYGADILRLWTASTDYSGE-LTISD 655

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSVCSRVL 398
           + LK+   +         +  ++  +L +               + E D   L +  ++ 
Sbjct: 656 EILKRVAES------YRRIRNTMKFLLANIADFDANKDLLPVNEWLEIDRYALHLTQKLQ 709

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVI 455
            E+  +      H A+ + +S  SE     Y D  K        N             + 
Sbjct: 710 TEVLADYDRYEFHLAVQKFVSFCSEDLGGFYLDILKDRLYTAGENSPARRAAQSALHHIT 769

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
             +  L+   +   AN+I+  L +  +   F+ +   L 
Sbjct: 770 HCMMRLMAPILSFTANEIWQTLGLETDKTVFEDVWYELP 808



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +K  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 50  KGAKKFILHDGPPYANGDIHIGHAVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIELV 109

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +        
Sbjct: 110 VEKNHGKNIDPAKFRELCREYAAEQVARQKKDFIRLGVLGDWDNPYLTMDFKTEADIMRA 169

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              I   G +Y+G     + +   +   + EV  
Sbjct: 170 LGDIQKNGYLYQGSKPVHWCVDCGSALAEAEVEY 203


>gi|332044494|gb|EGI80688.1| valyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 878

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 20/276 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLLSANL 284
           +  W  +    ++    + NP+  + K++ P +  V G DIL F    +    +      
Sbjct: 459 LDTWFSSWLWPMSVFDGIRNPENEEIKYYYPTNDLVTGPDILFFWVARMIIAGYEYKDQK 518

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      +      +  K+SKSLGN  D +++IE+   D +R  L+   A G D  +D+ 
Sbjct: 519 PFNNVYLTGLVRDKQRRKMSKSLGNSPDALKLIEDYSADGVRVGLLLSSAAGNDLMFDEA 578

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
             ++       N I N  + +    L +    I  P +   +     +  S  L EI ++
Sbjct: 579 LCQQ--GKGFGNKIWNAFNLT---NLWEVSDNIAQPESSKIALNWYEAKFSEALLEIEDH 633

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE----VIRQLAI 460
                +  AL  +  L+      +D    W L+   P     +   T      +      
Sbjct: 634 FSKYRLSDALMAIYKLI------YDDFCGWLLEIVKPAYQQPIDVATYNKVMSIFEDNLK 687

Query: 461 LLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLK 494
           +L  F+P L  +I+  +     +E        +   
Sbjct: 688 ILHPFMPFLTEEIWQYIAERTPEEALIIAKWPEAKP 723



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  EREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRHARLQGKNACWVPGTDHASIATEAKV 91

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + ++      +    L  S  +D    T +    +
Sbjct: 92  VAKLKEQGIDKNDLTRDEFLAHAWEWTEEYGGVILEQLKKLGCSCDWDRTKFTMDDDMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 AVIKVFVDLHEKGLIYRGYRMVNWDPEAKTTLSDEEVIH 190


>gi|300121379|emb|CBK21759.2| Leucyl-tRNA synthetase [Blastocystis hominis]
          Length = 840

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 88/233 (37%), Gaps = 9/233 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E +  Y+     YP+ + H+GH     I+D ++R+  ++G +V+   G D  G     A
Sbjct: 29  EEAKNCYVLPMFPYPSGKMHMGHVRVFSISDCISRYKAMNGYNVIHPMGWDAFGLPAENA 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A    +   ++   N    R     L+  +  D  + T+   ++   + L+ K+ +KG +
Sbjct: 89  AIERNIPPDIWTKNNVEEMRKQISGLNFRFNWDREVNTSTPEYYKWTQWLFLKLWEKGYV 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF---RLSAYQDKL 176
            +      +   D     +++V    +          ++      ++    ++S    + 
Sbjct: 149 TRRNGLVNWDPVDHTVLANEQV---DEEGRSWRSGALIERRTLTQWYVLTTKMSEKLLRG 205

Query: 177 LSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMY 229
           L    + P  +   +R+    S        L+ S    + GI++       +Y
Sbjct: 206 LDDLPNWPSVVKTAQRKWIGKSSGAEFTFSLASSDPKLN-GIRVFTTHPETIY 257



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 121/392 (30%), Gaps = 70/392 (17%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSA 171
             +GD+ K C S   S   + Y +   V     G  +          +M+   YF+R   
Sbjct: 444 MHEGDVSKMCGSDAMSPL-QRYDDWKTVSCPYCGNPHAQRDCDTLDTFMDSSWYFYRYLD 502

Query: 172 YQD-KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            Q+           +F +           +   L    ++R  F+ G+    +P      
Sbjct: 503 PQNATAFCDPSKMKQFPVVNYYVGGSEHSIMHLLFARFVARFLFEQGLAPSPEP------ 556

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKV 290
             D L               + A   P  +   GK+        W A             
Sbjct: 557 -FDHLITQGMVLSSTYKDLVTGAYLPPERVEKDGKE--------WKAKE----------- 596

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            ++  +  K  K+SKS  N +DP+EV+ + G DA+R  ++ +        Y+        
Sbjct: 597 -TNHPVEMKYSKMSKSKYNGVDPVEVVTKYGGDAVRIGMLMQCPPANAFMYN-------- 647

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILS-VCSRVLQEIRENMQNQL 409
                     +V+ +  MI K              S + + S   +    +I  +M    
Sbjct: 648 --------SGIVNPATDMIKKLERVCQICVEGANPSGKKLDSNKLNSQHNKILHDMDKFD 699

Query: 410 IHRALA--QVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            H  L+   ++     ++                    +     ++ ++++ + +  F P
Sbjct: 700 FHNVLSGVNIM-----LNDLLQ---------------GSYSKAYLDYVKRVVLFMAPFAP 739

Query: 468 KLANKIFDILFVADENRCFQSLDQRLKPGFML 499
             + + ++ L            D++  P  M+
Sbjct: 740 GKSEECWNQLIRGKCVSEKDGFDRQKWPQSMV 771


>gi|229579204|ref|YP_002837602.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228009918|gb|ACP45680.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 980

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 135/373 (36%), Gaps = 21/373 (5%)

Query: 131 RDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +DE     + V    D      +     ++        F  +     +     +      
Sbjct: 353 KDEMLKEIENVNWIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICEKCNNVIVVGS 412

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDW----GIKIPDDPQYIMYVWIDALTNYLTTTGY 244
             +  +  I  V + L    +           G+        +  VW D+   +  + G 
Sbjct: 413 REDLESIAIDSVPNDLHRPWIDNVRVKCNKCGGVAKRITD--VADVWFDSGVAFFASLGK 470

Query: 245 LDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEK 302
                  +    P DL + G D L   F ++     +L    P    +     +  +G +
Sbjct: 471 DWQEKWKELG--PVDLVLEGHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGFMLDEQGRE 528

Query: 303 ISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
           + KSLGN ++P  VI+  G D LR +L+R     +D  +    L +    DL       V
Sbjct: 529 MHKSLGNYVEPSVVIQRYGRDILRLWLLRNTT-WEDARFSWRAL-ELTKRDLQIIWNTYV 586

Query: 363 SRSVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVI 418
             S+ M L +++ +  T           D  ILS  + +L+++ E+M+N  +H     +I
Sbjct: 587 FASMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSMLKKVNESMKNYKVHEMANYLI 646

Query: 419 SL-VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           +  V +V R Y    +     + N      + Y+   +++Q  IL    +P ++ KI+  
Sbjct: 647 NFLVEDVSRFYIRLIRKRAWIEANTQDKIAMYYILYFILKQWIILASTIIPFISEKIYKS 706

Query: 477 LFV-ADENRCFQS 488
             V   E+   +S
Sbjct: 707 FVVNPKESVSMES 719



 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 20/155 (12%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAA------------------QNAGVTTKVFVDQNS 77
           R+ RL G  V    G D HG  I  A                   +N     K F   N+
Sbjct: 2   RYERLLGKKVHDQPGYDTHGLPIEVATERLLGILNKQEIIDKIGVENFINKCKEFALSNA 61

Query: 78  RNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
                    + +   ++    T +  +  +   + KK  +KG + KG     +  R E  
Sbjct: 62  TKMTQNFKDVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETT 121

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
            +D EV +  D +  +         EE  Y    +
Sbjct: 122 LSDYEVSEYRDLEDPSIYVKFKIKGEENRYLLIWT 156


>gi|225560325|gb|EEH08607.1| isoleucyl-tRNA synthetase,cytoplasmic [Ajellomyces capsulatus
           G186AR]
          Length = 1080

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/412 (15%), Positives = 140/412 (33%), Gaps = 17/412 (4%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +++ +                  +E+Y+    V    D ++ +   N   W      ++ 
Sbjct: 405 IYRAVPSWFVKIGPIIPQMLQGIEESYWVPSFVK---DKRFASWIANARDWNISRNRYWG 461

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW--GIKIPDDPQY 226
                     Y E      +   R+    +   + L    +   T     G  +    + 
Sbjct: 462 TPIPLWASEDYKEIIAIGSVEELRQLSGYTGELTDLHRDKIDHITIPSKQGKGVLRRVEE 521

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W ++ +    +  Y         K +P D    G D     F+ +   +  L   L
Sbjct: 522 VLDCWFESGSMPYASQHYPFENKEHFEKSFPGDFIAEGLDQTRGWFYTLAVISTHLYGKL 581

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   + +
Sbjct: 582 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRFKE 641

Query: 344 DGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTE---SDESILSVCSR 396
            G+K+ V   L     +        ++   ++D + +       T     D  IL+ C  
Sbjct: 642 SGVKEIVAKVLLPLWNSYKFFEAQVALLKKIEDVEYVFDPAAEATNTNVMDRWILASCQS 701

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    EV+
Sbjct: 702 LLKFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRRRLKGELGLDDTLHALNTLFEVL 761

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             L   L  F P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 762 YTLVRGLAPFTPFITDNIYLRL-LPHIPKSLQAEDSRSVHFLAFPEVREELF 812



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 20/165 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRTPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYD-DFIRTTEKR 101
                                    +  V + +  +R   D L   I +D D+ +T +  
Sbjct: 90  IDKTLGMSGSEAVEKLGLGKYNAECRAVVMRFAAEWRQTIDRLGRWIDFDNDYKQTMDTS 149

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + ++   + K++ DKG IY+G     YS       ++ E  +   
Sbjct: 150 YMESLWWIVKQLFDKGVIYRGYRVMPYSTALNTPLSNFEAQQNYK 194


>gi|88598973|gb|ABD44443.1| isoleucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 1114

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 75/457 (16%), Positives = 145/457 (31%), Gaps = 40/457 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D+ G   A  +  AG       D+     ++    L+ S     Y    RT     
Sbjct: 385 ICPIDDAGVYTAAISDFAGCHVFDATDKVIMYLKERGSWLETSTYTHSYPHCWRTDTPLI 444

Query: 103 HD----TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +         + K       + KG      ++RD  +    E  +            PV 
Sbjct: 445 YRAMPSWYIEVTKLKERMMQLNKGVNWIPDNVRDGQFGKWLEGIRDWSISRNRFWGAPVP 504

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD-----LSLSRKT 213
             + +   +                 + +LP  R  E        L       L      
Sbjct: 505 VWKSDDPKYPR--------IDVYGSIKKVLPNVRALEEDFGPIDDLHRPYIDDLVRPNPD 556

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGKDILRFH 271
              G  +      ++  W ++ +       Y         + +PAD     I +    F+
Sbjct: 557 DPSGKSMMRRVPDVLDCWFESGSMPFAQVHYPFENKELFEENFPADFITEYIAQTRGWFY 616

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  +  +    P    +     +  +G+K+SK L N +DP+EV E  G D+LR+ L+ 
Sbjct: 617 TLFVLSTGIFDKHPFESCICHGVILDIQGQKLSKRLNNYLDPMEVFERFGADSLRFMLLS 676

Query: 332 EIACG-KDGFYDKDGLKKRVN-ADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTES 386
                  D   D+DG   R    ++   I N  S        D      +    G     
Sbjct: 677 SSVSTGGDLLLDQDGQVIRDVLKNVVKPIWNSYSFFTVYANADKIRARVLDSLDGLNNIM 736

Query: 387 DESILSVCSRVLQEIRENMQN------QLIHRALAQVISLVSEVDRYFDAQ---KPWELK 437
           D+ IL  C  ++Q +   M++        I  A   ++    +++ ++  +   + W  +
Sbjct: 737 DKYILHECMHLVQSVLSAMESIEGHDPYDIKLACTAIVQFSDKLNNWYIRRCRERFWATE 796

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           KT              V+   + ++  F+P ++  I+
Sbjct: 797 KT--QDKFDAYNTLYTVLYYFSRVIAPFLPFISEAIW 831



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 26/164 (15%)

Query: 1   MKEREK---LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           ++ + K           + N  PH GH     I D +AR+  + G  V    G D HG  
Sbjct: 52  VENKPKTRRFVFYDGPPFANGLPHYGHLLTGFIKDAVARYKSMRGFRVDRRFGWDCHGLP 111

Query: 58  IAKAAQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +   ++                         +   F  +        A  +D  +D+  +
Sbjct: 112 VEMLSEKELNVSGRTKIEEFGIEKFNANCRNSIMRFTQKWKEYVTRQARWVD--FDNGYK 169

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           T +K   ++    + K+ D+G +Y+      YS   +   ++ E
Sbjct: 170 TMDKDFMESVMWAFYKLWDRGLVYESLRVVPYSWACQTPLSNFE 213


>gi|295660626|ref|XP_002790869.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226281121|gb|EEH36687.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 1079

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 108/294 (36%), Gaps = 12/294 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             ++  W ++ +    +  Y         K +P D    G D     F+ +      L  
Sbjct: 519 DEVLDCWFESGSMPYASQHYPFENQEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGVHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  ++   G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMNRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILK--DYDGMIPTPGAFTE---SDESILSVC 394
            + G+K+ V   L             V++I K  + D +       T     D  IL+ C
Sbjct: 639 KESGVKEIVAKVLLPLWNSYKFFEAQVALIKKIENVDYVFDPAAEATNTNVMDRWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + + M    ++  + +++ L+    + Y    +     +   D     L    E
Sbjct: 699 QSLLKFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRKRLKGELGLDDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           V+  L   L  F+P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 759 VLYTLVRGLAPFIPFITDNIYLRL-LPHIPKSLQAEDSRSVHFLPFPEVREELF 811



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + RE         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGREPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R++ D L   I +D+  +T +   
Sbjct: 90  IDKTLGMSGSEAVEKLGLAKYNNECRAIVMRFATEWREIIDRLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG IY+G     YS       ++ E  +   
Sbjct: 150 MESLWWIVKQLFDKGMIYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|94988868|ref|YP_596969.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992758|ref|YP_600857.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542376|gb|ABF32425.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546266|gb|ABF36313.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 933

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 IRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +++ ++  LL   +P    +I+  L    E
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYLEYESE 776



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|304412576|ref|ZP_07394181.1| isoleucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303592|ref|ZP_07583345.1| isoleucyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304349052|gb|EFM13465.1| isoleucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912490|gb|EFN42913.1| isoleucyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 940

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 131/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   SR     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVASRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEAEQYRKVTDTLDVWFDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFEPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E  +    H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALYLISEAMVRWIAPILSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVSMVIWTTTPWTLPANR 251


>gi|152991025|ref|YP_001356747.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166229752|sp|A6Q4I1|SYI_NITSB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151422886|dbj|BAF70390.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 918

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 73/483 (15%), Positives = 156/483 (32%), Gaps = 44/483 (9%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD---------MADVL 87
           +      D+      D+ G+      +   +  + FV  N     D         +    
Sbjct: 332 YRVGLKYDLEVLMPVDDAGRYDETIVREKLL-PEEFVGMNVFEANDKICELLGDALLKKE 390

Query: 88  DI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGW--YSLRDEAYYNDDEVYK 143
           DI  SY    RT +       +  +  +       +          +    +Y +     
Sbjct: 391 DIKHSYPHCWRTHKPIIFRATKQWFIAVDKAPKDLQKTLRQIALEEVEKTTFYPE----W 446

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
           G +      ++ P  W       + +     +     E   +  +               
Sbjct: 447 GRNRLKSMIENRP-DWCISRQRDWGVPIAFFRNKKTGEVIYDEKVLNYIAMIFERMGTDA 505

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMY---VWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
              LS+    +      P+D + +M    VW D+ + +              A  +PADL
Sbjct: 506 WYSLSVEELLYPGSGYDPNDLEKVMDILDVWFDSGSTWYAVLKSRRY----DAGNYPADL 561

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++ G D     F +    +  +    P    +     +  KGEK+SKS GNV+ P++V +
Sbjct: 562 YLEGSDQHRGWFQSSLLVSGAIEKRAPFKAILTHGFTVDEKGEKMSKSKGNVVAPMDVAK 621

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + GV+ LR ++        D     + LK+             +  +   +L + + +  
Sbjct: 622 KYGVEILRLWVAMSDYQ-SDLKISDNILKQ------IAEQYRKLRNTFRFMLANINDLET 674

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR----YFDAQKPW 434
               F   D  IL+    V +E+ +  +N    +  + + + +  V+     Y D  K  
Sbjct: 675 IQSDFGVLDRWILAKAKSVFEEVEKQFKNYQFAKGFSALNNFI--VNEFSGIYLDVCKDR 732

Query: 435 EL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
                  +  R ++   + + + + +  L+   +   A++I +       N      D  
Sbjct: 733 LYCDALNDSHRRASQSAMAL-IAKSMLGLIAPVLTYTADEIVEHAPSVLRNDAEDIFDFA 791

Query: 493 LKP 495
           ++P
Sbjct: 792 IEP 794



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +     Y N   HIGHA   I+ D++ +F+  +G  V FT G D HG  I + 
Sbjct: 45  EGKELFTLHDGPPYANGHIHIGHALNKILKDIIVKFNYFEGKAVRFTPGWDCHGLPIEQQ 104

Query: 62  AQNAGVT------TKVFVDQNSRNFRDMADVLDISYDDF 94
            +    T       K  + +  R     A  + I  ++F
Sbjct: 105 VEKKLGTAKKEQLPKTKIRELCREHA--AKFVGIQKEEF 141


>gi|217974391|ref|YP_002359142.1| isoleucyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782433|sp|B8EFC7|SYI_SHEB2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217499526|gb|ACK47719.1| isoleucyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 940

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 131/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   SR     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVASRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEAEQYRKVTDTLDVWFDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFEPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E  +    H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALYLISEAMVRWIAPILSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVSMVIWTTTPWTLPANR 251


>gi|219685858|ref|ZP_03540665.1| leucine--tRNA ligase [Borrelia garinii Far04]
 gi|219672588|gb|EED29620.1| leucine--tRNA ligase [Borrelia garinii Far04]
          Length = 451

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  DG       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230


>gi|162148176|ref|YP_001602637.1| leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786753|emb|CAP56336.1| puative leucyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 876

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 78/237 (32%), Gaps = 8/237 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K Y+     YP+ Q H+GH     + DV+AR+ R  G  VL   G      +     
Sbjct: 43  DRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRARGHSVLHPMGWTRSACRRKTRR 102

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIY 120
            NA  T +    Q +   R     L  S+  D  I T    ++   + L+  +   G + 
Sbjct: 103 ANAACTRRPGPGQIAA-MRATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLVE 161

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +   D     +++V  G            ++  +   +F R++ +   LL   
Sbjct: 162 RRESWVNWDPVDHTVLANEQVVDG----RGWRSGALIEKKQLSQWFLRITKFAPDLLDGL 217

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
              P +   +    E       G   +  +      G     D   +     D L  
Sbjct: 218 SHLPRWPERVRTMQERWIGRSVG-ARVRFALHAPPEGFDTDLDSVEVFTTRPDTLFG 273



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 19/178 (10%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  N + P+ +IE  G D  R+F++ +    +D  + + G+        A     
Sbjct: 631 EKMSKSKRNTVAPVAIIERFGADTARWFVLSDSPPERDMEWTEAGVAG------AARFLQ 684

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R+V  + +    +       TE+ +++     R +  + + +++  I+ A+A++  L
Sbjct: 685 RLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHRAIAAVTDALESFAINVAVARLHEL 744

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTV-EVIRQLAILLQAFVPKLANKIFDIL 477
            +             L ++        +     E    L +L    VP  A  +  +L
Sbjct: 745 TTA------------LAESERASGDDGMDFARREAALTLCLLAAPMVPHQAEDMLALL 790


>gi|331008205|gb|EGH88262.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 499

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 121/372 (32%), Gaps = 29/372 (7%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGVDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGAD---GQYYNAQHNP-VQWMEEEGYFFRLSAYQD 174
             +           EA+   +  Y GAD    Q  N    P  + M            Q 
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGADSDASQCENCAQAPDAELMTSLHCKLCRQPSQW 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGI--------KIPDDP 224
           K             P  R   +    +  L +          DWG+         +  D 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKPLDNWLRDTLEHLHDWGVTRPGDGGLDLQADG 242

Query: 225 QYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWPA 277
              ++ W   L  Y+       +         ++W +     +H +G D +  HAI +PA
Sbjct: 243 SCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHAIVYPA 302

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L       
Sbjct: 303 QLSALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLASIAPEQ 362

Query: 337 KDGFYDKDGLKK 348
            +G +     + 
Sbjct: 363 SEGDFRLTHFRA 374


>gi|224531696|ref|ZP_03672328.1| leucyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511161|gb|EEF81567.1| leucyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 840

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT ++ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKRQIKALGFAYDWDREIRTHDENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YAKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 134/390 (34%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   K+   + S++ ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNTIPLEENDLPLKLPKTANYEPSVTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTTTGYLDNPDG---SKAKFW-PADLHVIGKDI 267
                           M  W  +   YL      +  +     K ++W P DL++ G + 
Sbjct: 482 DWVKVKDTDFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKGE------------- 301
              H +Y   +         ++   P  K      + +  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITAFSYQKENGSLIPNDQVIEKDNK 601

Query: 302 ---------------KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P  +I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDTIIKEFGADSIRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  S+  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWSLKEKELSKDNPP--------KEIISQLHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINEILKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGEPPSLFKNSKWPKFDENL 774


>gi|83720304|ref|YP_441326.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618175|ref|ZP_02386806.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767710|sp|Q2T0H3|SYI_BURTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83654129|gb|ABC38192.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 945

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAEQWLEIDRYAVAFSAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P   +  +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASKARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + +  +T   ++       
Sbjct: 114 IEKQFGKSLPAAEVMAKARAYATEQIEKQKAGFKRLGVLGEWGNPYKTMNFQNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|258575681|ref|XP_002542022.1| valyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237902288|gb|EEP76689.1| valyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 1049

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 120/377 (31%), Gaps = 56/377 (14%)

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
           +  YY    N   W            +       Y    E     +    +    ++  +
Sbjct: 494 EKNYYRWMANITDWCLSRQL------WWGHQAPAYFVQFEGEKGDDSDGNLWVTGRTEEE 547

Query: 206 DLSLSRKTFDWG-IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  ++  F      +  DP  ++  W  +     +T G+           +P  +   G
Sbjct: 548 AMEKAKTKFPGMKFTLVRDPD-VLDTWFSSGLWPFSTLGWPKKTH-DLQNLYPTSVLETG 605

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI---- 317
            DIL F    +      ++  +P  ++V+ H  I   +G K+SKSLGNV+DP++V+    
Sbjct: 606 WDILFFWVARMIILGIKMTGQIPF-REVYCHSLIRDSEGRKMSKSLGNVVDPLDVMRGIT 664

Query: 318 ---------------------------------EEVGVDALRYFLVREIACGKDGFYDKD 344
                                             E G DALR+ LV     G D  +D  
Sbjct: 665 LEALHQKLLEGNLAQKEVATATKYQKKAFPKGIPECGADALRFSLVSYTTGGGDINFDIQ 724

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIR 402
            +         N I       +  +  D+         GA + S+  IL   +   +   
Sbjct: 725 VIYG--YRRFCNKIYQATKFVLGKLGSDFVPRPAAVKTGAESLSERWILHKFNIAAKIAN 782

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + ++ +    A   +         D + +  K    + +  D   +       V+     
Sbjct: 783 DKLEQREFSDAAYVLYQYWYSQLCDVFIENSKYLLQQDSPTDVQQSAKQTLYTVLEGALT 842

Query: 461 LLQAFVPKLANKIFDIL 477
           L+   +P ++ +++  L
Sbjct: 843 LIHPIMPFVSEELWQRL 859



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 19/142 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             ++          H+GHA    + D + R+ R+ G  VL+  G D  G       +   
Sbjct: 127 FVMTLPPPNVTGTLHVGHALTNALQDTMIRWQRMKGKTVLWLPGYDHAGISTQSVVEKIL 186

Query: 67  VT-----------------TKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                                 +  +  ++       +  S D      T ++       
Sbjct: 187 WKSEKKTRHDVGRPALTNMIWDWTHKYHKSITTSMKNMGGSLDWTREAFTMDENLSAAVT 246

Query: 108 ILWKKISDKGDIYKGCYSGWYS 129
             + K+ ++G IY+      + 
Sbjct: 247 ETFVKLHEEGIIYRANRLVNWC 268


>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 921

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 115/282 (40%), Gaps = 18/282 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +    PADL++ G D     F++    A 
Sbjct: 516 FRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWFNSSLSTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++   +    D
Sbjct: 570 AVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV-SSVDYQSD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D LK+   A++   I N   R +   L D++            E D  +L   + 
Sbjct: 629 VRISDDILKQV--AEVYRKIRNTF-RFLLGNLADFNPSQDAVAKAELREVDRYMLVKLND 685

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRASTVLYVTVE 453
           ++ +++E+ +          + +   +     Y D  K    ++  N      +  V  +
Sbjct: 686 LITKVKESYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAENNHDRRAIQTVLYD 745

Query: 454 VIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLK 494
           V+  L  L+   +P  A++++  +  V +E+     + + ++
Sbjct: 746 VLVALTKLVTPILPHTADEVWPYIPGVNEESVQLTDMPEAVE 787



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D+   T E  +     
Sbjct: 105 LTNKGVKRKEMTVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDNPYITLEPAYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 KVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQDKKSASIYVAFPV 214


>gi|170693571|ref|ZP_02884729.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141353|gb|EDT09523.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 945

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 109/285 (38%), Gaps = 20/285 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   +++ + +  +I  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYEKNARPVEDWLEIDRYAVALSANLQNDILS 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           +      H  +A++ +  SE     Y D  K   L  T  D  +  +       + + L 
Sbjct: 722 HYDKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYHIAQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE---NRCFQSLDQRLKPGFMLHK 501
            L+  F+   A + + +     E      + +       G +L K
Sbjct: 781 RLMAPFLSFTAEEAWKVFQPNSETIFTETYHAFPAVPDAGALLDK 825



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+K  +     Y N   H+GHA   I+ D++ +   + G D ++  G D HG  I   
Sbjct: 54  KGRKKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNMAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKLGFRRLGVLGEWDNPYKTMNFTNEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKILEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|306827040|ref|ZP_07460338.1| isoleucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430786|gb|EFM33797.1| isoleucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 933

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 104/281 (37%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        R+    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRNDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|60688363|gb|AAH90426.1| Vars protein [Danio rerio]
          Length = 700

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 70/422 (16%), Positives = 133/422 (31%), Gaps = 100/422 (23%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
            +   + V+ + +  ++        +      +    I+P        +++   ++D  +
Sbjct: 95  CSRSKDIVEPLLKPQWYVDCREMGKQAADVVRNGELKIIPDHHLKTWFNWMD-NIRDWCI 153

Query: 210 SRKTFDWGIKIP------DDP--------------------------------------- 224
           SR+   WG +IP      +DP                                       
Sbjct: 154 SRQ-LWWGHRIPAYFVTVNDPAVKPGEDVDGHYWVSGRSEQEAREKAAKRFNVTADKISL 212

Query: 225 ---QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFL 279
              + ++  W  +     +  G+ +  +  +  F+P  L   G DIL F    +      
Sbjct: 213 RQDEDVLDTWFSSGIFPFSIFGWPNESEDLRV-FYPGTLLETGHDILFFWVARMVMMGLK 271

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI---------------------- 317
           L+  LP  +           G K+SKSLGNVIDP++VI                      
Sbjct: 272 LTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLADSNLDPLEI 331

Query: 318 ---------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLV 362
                           E G DALR+ L    + G+D   D + +         N + N V
Sbjct: 332 EKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINLDVNRILG--YRHFCNKLWNAV 389

Query: 363 SRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             ++  + + +         G+ + SD  ILS  S  +       +          + + 
Sbjct: 390 KFAMRTLGEGFVPCEKAQLCGSESVSDRWILSRLSAAVALCDGGFKAYDFPTITTAIYNF 449

Query: 421 V--SEVDRYFDAQKPWELKKTNPD---RASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
                 D Y +  KP    +T+ +   +A          +     LL   +P ++ ++F 
Sbjct: 450 WLYELCDVYLECVKP-VFSRTDSEGQKQADVCRQTLYTCLEVGLRLLSPIMPFVSEELFQ 508

Query: 476 IL 477
            L
Sbjct: 509 RL 510


>gi|295425358|ref|ZP_06818061.1| leucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065134|gb|EFG56039.1| leucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 804

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D++AR  R  G +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIIARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +   +N   F++  + L  SYD    I T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPALVTKENIATFKEQLNKLGFSYDWGREITTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G           PV     + +  +++AY D+LL  
Sbjct: 148 YEADVPVNWSPDLGTVVANEEVIDGKT----ERGGYPVYRRNMKQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 68/417 (16%), Positives = 134/417 (32%), Gaps = 56/417 (13%)

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
                       ++ +    +           +   N          Q Y  +  PV   
Sbjct: 372 DGKHINSEFLDGLNIEEAKKRMIQWLEDHNCGKKKVNYKLRDWDFSRQRYWGEPIPVIHW 431

Query: 161 EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
           E+                         LP     +     +S L +L+      D   + 
Sbjct: 432 EDGTTSLVPED-----------ELPLRLPHATNIKPSGTPESPLANLTDWVNVVDKNGRK 480

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWP 276
                  M  W  +   YL      ++    +    K W P DL++ G +    H +Y  
Sbjct: 481 GKRETNTMPNWAGSSWYYLRYVDPHNDKELANYDLLKQWLPVDLYIGGAEHAVRHLLYAR 540

Query: 277 AFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            +         +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR +
Sbjct: 541 FWHKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMY 599

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESD 387
            +          +D +G                + R   +++ D D   IP      E+D
Sbjct: 600 EMFMGPLDASIDWDDNG---------PASTKKFLDRVWRLMVNDLDLKAIPQEKIVDEND 650

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTV 447
             +  V +  ++++ E+      + A++Q++   +                    +A T+
Sbjct: 651 GELDKVYNETVKKVTEDFDALHFNTAISQMMVFANAA-----------------QKAKTI 693

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
                E       LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 694 PR---EYAEGFVKLLAPIAPHMMEEIWSVFG-HDESITYAKWPTY-DPDKLVESTVE 745


>gi|294101952|ref|YP_003553810.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616932|gb|ADE57086.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 926

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/414 (16%), Positives = 124/414 (29%), Gaps = 70/414 (16%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           V       +      P+ +   E +F  +S ++ + L   E    +I    +        
Sbjct: 394 VKIKHSYPHCWRCKRPIIFRSTEQWFIAVSKFRQETLDIIEKGVRWIPDWGKDRIYNMVR 453

Query: 201 KSGLKDLSLSRKT-----------------------------------FDW--------- 216
                 +S  R                                       W         
Sbjct: 454 DRSDWCISRQRVWGVPIPAFYCKECGELILKPELIRAVQAKVKEEGSSVWWKLSPEELLG 513

Query: 217 --------GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                   G +       IM VW D+  ++ +               WPAD+++ G D  
Sbjct: 514 NLAQCPTCGSRHLVKDTNIMDVWFDSGVSHFSVLETRP------ELKWPADMYLEGSDQH 567

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F      +  +    P    +     +  +G+K+SKSLGNV+ P EV+++ G D LR
Sbjct: 568 RGWFQTSLLTSVAIRKKAPYRNVLTHGFIVDGEGKKMSKSLGNVVRPQEVVDKYGADILR 627

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFT 384
            ++        D    +  +K    +     I N   R +   L D+D    T       
Sbjct: 628 LWVASTDY-RNDIRISEGIIKSLTES--YRRIRNTA-RYLLGNLVDFDPAKDTVPYNELL 683

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNP 441
           E D+ ILS  ++V+            H     +           + D  K      +T+ 
Sbjct: 684 EIDKWILSKLNQVVDRATHGFDEYEFHVPTFVIHQFCVTELSSFFLDVSKDRLYADETDS 743

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                      +V+  L  +L   +   A +I+  + +  + R  +S+     P
Sbjct: 744 ISRRGCQTAMWQVLLTLTRMLAPILSFTAEEIWQEM-IKIDARLPESVFLSDWP 796



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E   +     Y N   HIG A+  I+ D + ++  + G    +  G D HG  I   
Sbjct: 47  EGKESFILHDGPPYANGNIHIGTAFNKILKDFIPKYKIMKGYYSPYVPGWDTHGLPIELH 106

Query: 62  AQNAGVTTKVFVDQN---SRNFRDMADVLDISYDDFIR------------TTEKRHHDTC 106
              +   TK  +D      +  +   + LDI  ++FIR            T    +    
Sbjct: 107 VLKSHGITKDAIDPVELREKCTKYAYEYLDIQRNEFIRLGVVGDWENPYVTLHSEYEAAQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              +  + + G +YKG    ++    +      E+    +
Sbjct: 167 LGAFADMVELGLVYKGHKPVYWCTDCQTALAAAEIEYWDE 206


>gi|152999655|ref|YP_001365336.1| isoleucyl-tRNA synthetase [Shewanella baltica OS185]
 gi|166229768|sp|A6WKD4|SYI_SHEB8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151364273|gb|ABS07273.1| isoleucyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 940

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 131/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   SR     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHSDSVSLMERVASRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEAEQYRKVTDTLDVWFDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFEPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E  +    H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALYLISEAMVRWIAPILSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSGYSHPVSMVIWTTTPWTLPANR 251


>gi|307188306|gb|EFN73098.1| Isoleucyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 1210

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/399 (14%), Positives = 122/399 (30%), Gaps = 32/399 (8%)

Query: 96  RTTEKRHHDTCRILWKKIS----DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           RT     +      + ++              Y     ++++ + N     +        
Sbjct: 422 RTDTPLIYKAVPSWFLRVELIKEQLLTANNATYWVPNYVKEKRFGNWLRDARDWAISRNR 481

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              NP+     +                        L      ++    +  +  L +  
Sbjct: 482 YWGNPIPLWISD-----------DQEEIVCIGSIEELEQLTGTKITDIHRESIDHLEI-- 528

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            +   G         +   W ++ +       Y         K +PAD    G D     
Sbjct: 529 PSRRSGHPPLRRIPEVFDCWFESGSMPYAQVHYPFKQQEDFDKCFPADFIAEGIDQTRGW 588

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L    P    V +   +   G+K+SK   N  DP+++I + G DALR +L
Sbjct: 589 FYTLLVISTALFGKAPYKNLVVNGLILASDGQKMSKRKKNYPDPLDIISKYGADALRLYL 648

Query: 330 VREIACGKD-GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE--- 385
           +       D   + ++G++  +   L         R +   +  ++  +     F E   
Sbjct: 649 INSPVVRADNLRFKEEGVRDIIKDVLLPWYNAF--RFLVQNIDQFEREMKERFVFDETNL 706

Query: 386 ------SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK 438
                  D+ I+S    +L  + + M    ++  +  +I  +  + + Y    +     +
Sbjct: 707 TYSDNIMDKWIISFTQTLLVFVGKEMTEYRLYTVVPYLIKYIDNLTNWYVRMNRKRIKNE 766

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D     L     VI  +  +   F P +   +F+ L
Sbjct: 767 DGYDDCKNALKTLFLVIYTMVRVYAPFTPFITEYMFNWL 805



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R +        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 56  RDRPRYSFYDGPPFATGLPHYGHILAGTIKDIVTRYAYQCGYHVERRFGWDCHGLPVENE 115

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRH 102
                          +  K +  +  +     AD  +         I + +  +T    +
Sbjct: 116 IDKEYNIKGPDDVAKMGIKEYNLKCRKIVMRYADEWEKIITRVGRWIDFSNDYKTMYSWY 175

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K++ +KG +YK      YS       ++ E
Sbjct: 176 MESIWYIFKQLYNKGLVYKSSKVMPYSTACNTVLSNFE 213


>gi|50309733|ref|XP_454879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644014|emb|CAG99966.1| KLLA0E20549p [Kluyveromyces lactis]
          Length = 1073

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 110/279 (39%), Gaps = 11/279 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y        ++  PA+    G D     F+ +      L  
Sbjct: 524 EEVFDCWFESGSMPYASQHYPFENTEKFSQRVPANFISEGLDQTRGWFYTLGVLGTHLFG 583

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            +P    + S   +   G+K+SKSL N  DP  V+E+ G DALR +L+       +   +
Sbjct: 584 EVPYRNVIVSGIVLAADGKKMSKSLKNFPDPNIVLEKYGSDALRLYLINSPVLKAESLKF 643

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
            ++G+K+ V+  L         +   ++++ K+ D      P   +    D  IL+    
Sbjct: 644 KEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKNSDVDFKYNPHLKSDNVMDRWILASLQS 703

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  I + M    ++  + +++  + E+ + Y    +     +   +     L    + +
Sbjct: 704 LVAYIHQEMSTYKLYTVVPRLLDFIDELTNWYIRFNRRRLKGEGGVEDCLKALNTLFDAL 763

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQR 492
                 +  F P L++ I+  L  F+ +E     S D R
Sbjct: 764 FTFVRAMAPFTPFLSDNIYSKLRPFIPEEVLAQYSKDSR 802



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK- 60
           +++ +        +    PH GH     + D++ R+  + G  V    G D HG  I   
Sbjct: 36  EDKPEFSFFDGPPFATGTPHYGHLLASTVKDIVPRYATMTGHHVERRFGWDTHGLPIEHI 95

Query: 61  AAQNAGVTTKV----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
             +   +T K                  V   +  +R     L   I +DD  +T     
Sbjct: 96  IDKKLNITCKEDVYAFGIDNYNNECRAIVSTYAEEWRKTIGRLGRWIDFDDDYKTMYPTF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ DK  +Y+G     YS       ++ E  +   
Sbjct: 156 MESIWWAFKELFDKDQVYRGYKVMPYSTGCTTPLSNFEAQQNYK 199


>gi|150404049|gb|ABR68338.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M       AL QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDALDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTNAPLQIFGQLGLDHENDDHKLVQWGALPAGAKVVEQGTPIFPRL 120


>gi|54293912|ref|YP_126327.1| isoleucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822422|sp|Q5WXX1|SYI_LEGPL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53753744|emb|CAH15202.1| Isoleucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 931

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 127/378 (33%), Gaps = 23/378 (6%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +   S   S   +A  N+ +              N V+   +     + S      L  +
Sbjct: 419 QWFISMDKSNLRQAIINEIDKVNWVPDWGKARISNMVENRPDWCISRQRSWGTPMPLFVH 478

Query: 181 ESHPEFI--LPIERRNEVISFVKSGLKDLSL--SRKTFDWGIKIPDDPQYIMYVWIDALT 236
           ++  E             +   KSG+       S +      K  D     M VW+D+  
Sbjct: 479 KTTRELHPDTLELIEKVAVMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGI 538

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHG 294
           ++ +          +    +PAD++  G D     F++    A  +    P    +    
Sbjct: 539 SHYSVLK------HNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAPYKTVLTHGY 592

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
            +  +G+K+SKS GN +   +++ + G D LR ++       +     ++ +K+  NAD 
Sbjct: 593 TVDAEGKKLSKSKGNYVALDKLVNQHGADILRLWVASTDYRHE-VSISEEIIKR--NADA 649

Query: 355 ANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHR 412
              I N   R +   L D++            E D   L  C  + +EI     N   H 
Sbjct: 650 YRRIRNTA-RFLLANLFDFNPASDCIDAKELLELDRWALKRCQLLQEEIITAYDNYHFHL 708

Query: 413 ALAQVISL--VSEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
              ++ +   V     Y D  K  +    K +  R  +       +++   I L   +  
Sbjct: 709 IYQKIHNFCAVDMGSFYLDLIKDRQYTTAKDSIAR-RSCQTAMYHMVKAFTIWLAPILSF 767

Query: 469 LANKIFDILFVADENRCF 486
            A +I+  +   +    F
Sbjct: 768 TAEEIWQTIPGNNSESIF 785



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 49  KRFILHDGPPYANGHLHCGHALNKILKDIIIKSKTFSGFDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
                   ++ + F  +           +DI  D+F R
Sbjct: 109 KVGKAGSKISPREFRAKCREYAASQ---IDIQRDEFQR 143


>gi|15675414|ref|NP_269588.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533513|sp|Q99YW3|SYI_STRP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13622601|gb|AAK34309.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 933

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 104/281 (37%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNTKENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGTVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|110005313|emb|CAK99637.1| leucyl-trna synthetase protein [Spiroplasma citri]
          Length = 805

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 3/186 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +K YI     YP+    H+GH    +  DV++R  +L G DVL   G D  G    + 
Sbjct: 28  SEQKAYILDMFPYPSGAGLHVGHPKGYVATDVISRMRKLQGYDVLHPIGWDAFGLPAEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  QN  NFR+    L  SYD    + T+      T +++++ +   G  
Sbjct: 88  ALQTGNNPAEFTLQNIANFRNQLKALGFSYDYEKEVNTSSPEFFKTTQLIFELLYQNGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         ++EV            H PV       +  +++AY +KLL+ 
Sbjct: 148 EMRDVDVNWCPELGTILANEEVLNINGKMVSERGHFPVLKKPMRQWVLKITAYAEKLLAG 207

Query: 180 YESHPE 185
            +    
Sbjct: 208 LDEVDW 213



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 108/347 (31%), Gaps = 64/347 (18%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  +                       LP     +     +S L + +
Sbjct: 412 YKLRDWLFSRQRYWGEPFPIIHWEDGSISLVDETELPLELPKMTNIKPSQTGESPLANAT 471

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK---------AKFWPAD 259
                 D   K        M  W  +   YL      D                K+ P D
Sbjct: 472 EWLTVVDRTGKKGRRETNTMPQWAGSCWYYLAYILMEDKQMLDLRSTKAQALLKKWLPVD 531

Query: 260 LHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
           L+V G++    H +Y   +         +  + P  K V     +   G K+SKS GNVI
Sbjct: 532 LYVGGQEHAVLHLLYSRFWHKFLYDQKLVPTSEPFYKLVNQGMILGTDGSKMSKSKGNVI 591

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
           +P ++I+  G D LR + +          ++ +GL      D A    + V R    ++K
Sbjct: 592 NPDDIIKSHGADTLRLYEMFMGPIEASLPWNPNGL------DSARKWLDRVYR----LIK 641

Query: 372 DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQ 431
           + +                  V   ++++  E ++    +  ++Q++  ++   +     
Sbjct: 642 NNNFSQDNNHELDF-------VYHSMVKKGTEMLEKLSFNTVISQLMVFINACYK----- 689

Query: 432 KPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                         T   +          +L  F P LA +I++ L 
Sbjct: 690 --------------TKGPIYQPYFEGFTKMLSLFAPHLAEEIWEKLN 722


>gi|323127710|gb|ADX25007.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 933

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 103/281 (36%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARDNLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATINDAYERYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFHAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGVKRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|298487010|ref|ZP_07005062.1| Methionyl-tRNA synthetase-related protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298158452|gb|EFH99520.1| Methionyl-tRNA synthetase-related protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 499

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 124/377 (32%), Gaps = 39/377 (10%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R             ++  + + G     D
Sbjct: 63  QGVDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAQAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+   +  Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTGLHCKLCRQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    F +L+ ++  L                 +  +      L D  ++R   D G+ 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLSALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKK 348
                 +G +     + 
Sbjct: 358 IAPEQSEGDFRLTHFRA 374


>gi|300768835|ref|ZP_07078729.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493568|gb|EFK28742.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 932

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 105/269 (39%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 520 FTKETDIMDVWFDSGSSHQGVLAERSY------LDYPADLYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S + P  + +     + ++G K+SKSLGN I P +VI+++G + +R ++        D
Sbjct: 574 AVSGHAPYKQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVASVDTS-SD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
                +  K+   AD      N V R +     D+D              D+ + +  + 
Sbjct: 633 VRVSMESFKQV--ADSYKKFRNTV-RFMLGNTADFDPKTNRVAYEDLASVDQYMETRLNE 689

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVE 453
            + E +++  +        ++I+   V   + Y D  K    +   +     ++  V  +
Sbjct: 690 FVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAEDSHSRRSMQTVFYD 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           V+  L  L    +P    +I+  L   +E
Sbjct: 750 VLVALTKLFTPMLPHTTEEIWPFLKEPEE 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPSFILHDGPPYANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQK 104

Query: 62  AQNAGVTTKVFVDQNSRN------------FRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AG   K   D   R              RD    L +   +D+   T +        
Sbjct: 105 LKQAGYDRKKMTDNEFRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +  IY+G    ++S   E+   + EV   
Sbjct: 165 RVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEVEYH 201


>gi|257387116|ref|YP_003176889.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169423|gb|ACV47182.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 1089

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/297 (21%), Positives = 113/297 (38%), Gaps = 26/297 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G+     P  +  VW+D+      T  Y    + +  + WPADL +   D     F +  
Sbjct: 529 GVTYERVPD-VFDVWLDSAVATWGTIDYPSETE-AFDELWPADLIIEAHDQTRGWFWSQL 586

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                     P  + V     ++  G  +SKS    +DP EVI++ G D +R FL+   A
Sbjct: 587 GMGTAAVGASPYERVVMHGHALMPDGRAMSKSRDIRVDPGEVIDDYGADPMRAFLLSLAA 646

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTE-------- 385
            G+D  +  DG ++       N + N+    +  M +  +   + T    +E        
Sbjct: 647 RGEDMNFSYDGTEEMQRR--LNILWNVFRFPLPYMRMDGFSPRVATESQRSEGGDAAEGT 704

Query: 386 ---------SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYF-DAQKPW 434
                    +DE +LS    V  E  E M+      A+  ++  V E V RY+    +  
Sbjct: 705 GIDDVTLDLADEWVLSRLQTVEAEATEAMEEFRQDDAIEGILDFVVEDVSRYYVQLVRER 764

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             ++ + +           V+R++  LL  F P +A +I+  L    E+      D 
Sbjct: 765 MWEEDDSESKRAAYATLYRVLREVVALLAPFTPFVAEEIYGTLTGESEHPTVHMCDW 821



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E  +      Y +   H+GHA+   + DV  R+ R+ G DV    G D HG  I    
Sbjct: 39  DGEDFFFVDGPPYTSGSAHMGHAWNKSLKDVYIRYKRMCGYDVTDRPGYDMHGLPIETKV 98

Query: 63  QNAG-----------------VTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
           +                       + F + +    ++      +   +D+  RT E  + 
Sbjct: 99  EEEKEFRNKKDIEAFGVENFVDACREFAETSLEGLQEDFKSFGVWMDWDNPYRTVEPEYM 158

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +     +    ++  + +G  S     R E    ++EV  
Sbjct: 159 EAAWWGFASAHERDLVEQGQRSITQCPRCETAIANNEVEY 198


>gi|196000174|ref|XP_002109955.1| hypothetical protein TRIADDRAFT_21001 [Trichoplax adhaerens]
 gi|190588079|gb|EDV28121.1| hypothetical protein TRIADDRAFT_21001 [Trichoplax adhaerens]
          Length = 1055

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 110/378 (29%), Gaps = 46/378 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +    +  ++    N   W      ++        +                        
Sbjct: 500 IPNMFEKTWFQWLDNIRDWCISRQLWWGHRIPAYFVTINDPDVKNGSDADNHFWISAHNE 559

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
              +             I +  D   ++  W  A        G+ +     K  F+P  L
Sbjct: 560 DEAMNKAVNRFNCPKEKITLKQDED-VLDTWFSAALFPFAIFGWPNETLDLKT-FYPGSL 617

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI- 317
              G DIL F    + +    L  ++P  +           G K+SKSLGN+IDP++VI 
Sbjct: 618 LETGHDILFFWVARMVFFGMKLMGDVPFKEIYLHAIVRDAHGRKMSKSLGNIIDPLDVIS 677

Query: 318 ------------------------------------EEVGVDALRYFLVREIACGKDGFY 341
                                                E G DALR+ L+   + G+D   
Sbjct: 678 GIGLEDLHEQLRNSNLDKKEIAKAIQGQKEDFPQGIPECGADALRFTLLAYSSQGRDINL 737

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D             N I N    ++S+I  D+          +  D+ IL+  S      
Sbjct: 738 DVGR--TWGYRKFCNKIWNATKFALSVIGNDFIPSTQDFTKASLIDQWILNRLSMATDVC 795

Query: 402 RENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               +  +       + +       D Y +  KP   + +N +  +    V    +    
Sbjct: 796 NMGFETYIFQDMTTAIYNFWWYDLCDVYIECLKP-VFQNSNKEAQNIARNVLYICLDHGL 854

Query: 460 ILLQAFVPKLANKIFDIL 477
            LL   +P +  +++  L
Sbjct: 855 RLLHPCMPFVTEELWQRL 872



 Score = 57.5 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 23/146 (15%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
              I           H+GHA    + D + R+ R+ G   L+  G D  G       +  
Sbjct: 137 NFMICIPPPNVTGSLHLGHALMCSVEDCITRWRRMKGQRTLWNPGCDHAGIATQVVVEKK 196

Query: 66  GVTTKVFVD---------------------QNSRNFRDMADVLDISYDDFIRTTEKRHHD 104
               +                         +     + +A   D  +D    + +     
Sbjct: 197 LWRERKLTRHDIGREKFLEEVWKYKHEKGGRIYEQIKCLAASAD--WDRAFFSMDDNCCR 254

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSL 130
             +  + ++ D+G IY+      +S 
Sbjct: 255 AVKEAFIRLHDEGVIYRNLRLVNWSC 280


>gi|47096662|ref|ZP_00234249.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254899283|ref|ZP_05259207.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912578|ref|ZP_05262590.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936904|ref|ZP_05268601.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014984|gb|EAL05930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609502|gb|EEW22110.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590567|gb|EFF98901.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 921

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 108/282 (38%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPE 784



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|251782905|ref|YP_002997208.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391535|dbj|BAH81994.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 933

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 103/281 (36%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARDNLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATINDAYERYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFHAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGVKRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|21910702|ref|NP_664970.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895608|ref|NP_801958.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759061|sp|Q8K6S2|SYI_STRP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21904905|gb|AAM79773.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28810857|dbj|BAC63791.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 933

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 103/281 (36%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARDNLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATINDAYERYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G  V +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFHVPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGVKRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|254556997|ref|YP_003063414.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254045924|gb|ACT62717.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 932

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 105/269 (39%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 520 FTKETDIMDVWFDSGSSHQGVLAERSY------LDYPADLYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S + P  + +     + ++G K+SKSLGN I P +VI+++G + +R ++        D
Sbjct: 574 AVSGHAPYKQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVASVDTS-SD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
                +  K+   AD      N V R +     D+D              D+ + +  + 
Sbjct: 633 VRVSMESFKQV--ADSYKKFRNTV-RFMLGNTADFDPKTNRVAYEDLASVDQYMETRLNE 689

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVE 453
            + E +++  +        ++I+   V   + Y D  K    +   +     ++  V  +
Sbjct: 690 FVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAEDSHSRRSMQTVFYD 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           V+  L  L    +P    +I+  L   +E
Sbjct: 750 VLVALTKLFTPMLPHTTEEIWPFLKEPEE 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPSFILHDGPPYANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQK 104

Query: 62  AQNAGVTTKVFVDQNSRN------------FRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AG   K   D   R              RD    L +   +D+   T +        
Sbjct: 105 LKQAGYDRKKMTDNEFRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +  IY+G    ++S   E+   + EV   
Sbjct: 165 RVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEVEYH 201


>gi|126465639|ref|YP_001040748.1| valyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014462|gb|ABN69840.1| valyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 815

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 84/482 (17%), Positives = 154/482 (31%), Gaps = 48/482 (9%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN-----SRNFRDMADVLDIS 90
           R+  L+GL  +      E              T  V V         + FRD+     I 
Sbjct: 246 RYKHLNGLHAINPLYGHEMIITTYPEVDPEFGTGLVMVCSYGDQTDVKMFRDLGLKPTII 305

Query: 91  YDDFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            D   R T+        +  +  R   + + +KG + K                  ++  
Sbjct: 306 IDKDGRLTQVAGPLSGLKVEEARRKAAEILEEKGLLVKKEKIKHSVPVCWRCKTPIQIIH 365

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI-----------LPIER 192
             +                +   F+   ++ KLL + +S                +P+ R
Sbjct: 366 TKEWFLKQLDFKDEIRKIAKTIEFKPEMHRKKLLDWIDSVSSDWPISRDRYYATEVPVWR 425

Query: 193 RNEV--ISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-------YIMYVWIDALTNYLTTTG 243
             +   +   + G        +       +   P+        +   W D+  + L  TG
Sbjct: 426 CRKCGSVLLPEPGKYYRPWKDEPPWDKCPVCGAPKEYLEGEKKVFDTWFDSSISVLYVTG 485

Query: 244 YLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGE 301
           Y  N      K +   L   G+DI+R    Y     + L+          +   +  KGE
Sbjct: 486 YKRNDK-LFRKAFKYTLRPQGQDIIRTWLYYSLLRVYQLTGKPAFKWVRITGMGLDEKGE 544

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
            + KS GNVIDP   IE+ G DA RY+       G D  + +  +  R     A  + N+
Sbjct: 545 AMHKSKGNVIDPEPYIEKYGADAFRYWAAASAKLGYDYRFSEQVI--RTGFLFATKLWNI 602

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             R +SM  K               DE+ ++  + +L+EI E   N  +   +  +   +
Sbjct: 603 A-RFISMFQK-----PEKKPMLRPLDEATIAYFNNMLKEIDEAYSNLDVFEPITSIYQFI 656

Query: 422 S--EVDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
                  Y +  K     + N    +      Y    ++ +    L   +P + + ++  
Sbjct: 657 WNYFASHYIELVKSRAYNRENKYSREEQEAAWYTLHYILNRTLRALAPIMPFVTDALYTR 716

Query: 477 LF 478
           L+
Sbjct: 717 LY 718



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 20/179 (11%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           RE + I T   Y + + H+G A      D++AR+ R+ G +VL     D +G  +    +
Sbjct: 43  REIIAIDTPPPYASGKWHVGGAAHYAQIDMIARYFRMKGYNVLVPFYADRNGLPVEVQVE 102

Query: 64  NA--------GVTTK----------VFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHD 104
                       T +           F+D+   +   +  +L  S+D +   T  + +  
Sbjct: 103 KTYGINPHEISKTPEGREEFLRLCRKFLDKAEEDIVKIWRMLGCSFDYWRNGTDSEEYRK 162

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQWMEE 162
             +  + ++  KG IY+      +  R +    D E+     +G  Y  +    +  EE
Sbjct: 163 ITQATFIELYKKGLIYEAERPVNWCPRCKTTLADAELEHKEAEGYLYYIKFKVKETGEE 221


>gi|308180989|ref|YP_003925117.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046480|gb|ADN99023.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 932

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 105/269 (39%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 520 FTKETDIMDVWFDSGSSHQGVLAERSY------LDYPADLYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S + P  + +     + ++G K+SKSLGN I P +VI+++G + +R ++        D
Sbjct: 574 AVSGHAPYKQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVASVDTS-SD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
                +  K+   AD      N V R +     D+D              D+ + +  + 
Sbjct: 633 VRVSMESFKQV--ADSYKKFRNTV-RFMLGNTADFDPKANRVAYEDLASVDQYMETRLNE 689

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVE 453
            + E +++  +        ++I+   V   + Y D  K    +   +     ++  V  +
Sbjct: 690 FVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAEDSHSRRSMQTVFYD 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           V+  L  L    +P    +I+  L   +E
Sbjct: 750 VLVALTKLFTPMLPHTTEEIWPFLKEPEE 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPSFILHDGPPYANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQK 104

Query: 62  AQNAGVTTKVFVDQNSRN------------FRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AG   K   D   R              RD    L +   +D+   T +        
Sbjct: 105 LKQAGYDRKKMTDNEFRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +  IY+G    ++S   E+   + EV   
Sbjct: 165 RVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEVEYH 201


>gi|28378792|ref|NP_785684.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|81631129|sp|Q88V89|SYI_LACPL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28271629|emb|CAD64535.1| isoleucine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 932

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 105/269 (39%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 520 FTKETDIMDVWFDSGSSHQGVLAERSY------LDYPADLYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S + P  + +     + ++G K+SKSLGN I P +VI+++G + +R ++        D
Sbjct: 574 AVSGHAPYKQVLSQGFTLDNQGRKMSKSLGNTIAPADVIKQMGAEIVRMWVASVDTS-SD 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSR 396
                +  K+   AD      N V R +     D+D              D+ + +  + 
Sbjct: 633 VRVSMESFKQV--ADSYKKFRNTV-RFMLGNTADFDPKANRVAYEDLASVDQYMETRLNE 689

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVE 453
            + E +++  +        ++I+   V   + Y D  K    +   +     ++  V  +
Sbjct: 690 FVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAEDSHSRRSMQTVFYD 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           V+  L  L    +P    +I+  L   +E
Sbjct: 750 VLVALTKLFTPMLPHTTEEIWPFLKEPEE 778



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPSFILHDGPPYANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQK 104

Query: 62  AQNAGVTTKVFVDQNSRN------------FRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AG   K   D   R              RD    L +   +D+   T +        
Sbjct: 105 LKQAGYDRKKMTDNEFRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +  IY+G    ++S   E+   + EV   
Sbjct: 165 RVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEVEYH 201


>gi|18313245|ref|NP_559912.1| valyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74563325|sp|Q8ZVG2|SYV_PYRAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18160765|gb|AAL64094.1| valyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 799

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 22/290 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLSAN 283
           +   W D+  +++  +G +     + +K +P   +   G DI+R    Y    A+LL  +
Sbjct: 456 VFDTWFDSSISWMYASG-VTKDFNAFSKVYPHSIMRPQGYDIIRTWLYYSLLRAYLLYGD 514

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +P      +   +  KGE + KS GNVID +  +E+ G D +R++       G D  Y++
Sbjct: 515 VPFRYVRINGMGLDEKGEAMHKSKGNVIDLLAPVEKYGADPVRFWAAAAGRLGTDYRYNE 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +  R   +    + N+    +S                   D ++L+    V +++  
Sbjct: 575 NVI--REGKEFLTKVWNISRFVLSF------PEPQQKPQLAPVDRALLARLYDVAKKVIT 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQL 458
                 ++     + + +     D Y +  K     +      +     ++      R  
Sbjct: 627 AYSEFDVYEPAHALYNFIWHEFADHYIELVKSRAYNREGVFTEEEQRAAIWTLYTAWRYS 686

Query: 459 AILLQAFVPKLANKIF-DILFVADENRCFQSLDQRLKPG----FMLHKTF 503
             LL   +P + +KI+ +    +  +   +   +  K G    F L K  
Sbjct: 687 LKLLAPIMPFVTDKIWREAYGRSIHDEMIEDPPEEWKEGDQALFHLVKKI 736



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 15/145 (10%)

Query: 3   EREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R    I T   Y  + +PHIG        D++ARF R+ G+DV+F    D +G  I   
Sbjct: 34  SRPVFVIDTPPPYLSSNRPHIGQTASYAHFDMIARFLRMRGVDVIFPFYLDRNGLPIEVQ 93

Query: 62  AQN-----AGVTTKVFVDQNSR--------NFRDMADVLDISYDDFIR-TTEKRHHDTCR 107
            +      A    +    +  +         F        +S+D +   T    +    +
Sbjct: 94  VEKKYGVVAHEIPREKFIKMCKEELDSYEGEFVSSLRRWGLSFDYWPNGTDSPEYRRMTQ 153

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRD 132
             + ++  KG +Y+      +  R 
Sbjct: 154 KTFIELWHKGLVYEAERPTPWCPRC 178


>gi|307594198|ref|YP_003900515.1| aminoacyl-tRNA synthetase class Ia [Vulcanisaeta distributa DSM
           14429]
 gi|307549399|gb|ADN49464.1| aminoacyl-tRNA synthetase class Ia [Vulcanisaeta distributa DSM
           14429]
          Length = 810

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 131/388 (33%), Gaps = 58/388 (14%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P++ +    YF +   ++D  L     +   I P E    +I +++S   D 
Sbjct: 342 PICWRCKTPIEIIVTREYFLKQLQFKD-ELIKLVQNEMIIKPPEYAQTLIDWIRSLEFDW 400

Query: 208 SLSRKTFDWG-IKIPD----------------------------------------DPQY 226
            +SR+ +    I I                                              
Sbjct: 401 PISRRRYYGTEIPIWYCIDEEGNAKPIVPKPGKYYRPWKDEPPPEVKEQCPSGKLVGEDR 460

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W D+  +++  TGY         K +P   L   G DI+R    Y    A+LL   
Sbjct: 461 VLDTWFDSSISWIYATGYTKPNIRVFEKVYPHSILRPQGYDIIRTWLYYSVVRAYLLYGK 520

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P      S   +  KGE + KS GN+IDPI  +E+ G DA R++       G D  Y +
Sbjct: 521 PPFKYVRISGMGLDEKGEAMHKSKGNIIDPIPPVEKYGADAARFWAAASAKLGSDYRYSE 580

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
             +  R   D A  + N+     S         +      T  D  IL+  + V++    
Sbjct: 581 QLI--RTGHDFAVKLWNIARFVSSF------PEVNDNYELTPLDLMILAKLNEVVRASLN 632

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQL 458
                 ++  +  +         D Y +A K     +       +     +   +V++ +
Sbjct: 633 AYNEFDVYVPINTLYDFTWHVFADHYLEAVKSRAYNRDGLFTEKQQRGAWFTLYKVLKTV 692

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF 486
             LL   +P + ++I+  L+    +R  
Sbjct: 693 LKLLAPIMPFVTDQIWRSLYGESIHRQL 720



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 14/165 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++R  + I T   YP+ +PHIG        D++ARF R+ G +V+F    D +G  +   
Sbjct: 36  EKRPTIVIDTPPPYPSGRPHIGGIAHYAQIDMIARFFRMRGYNVIFPFYADRNGLPVEVQ 95

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCR 107
            +                   + F+D+    F  +      S+  +   T  + +    +
Sbjct: 96  VEKTYGINMYEVPREKFLELCRKFLDEYEGEFVSIFRRWGGSFSYWRNGTDSEEYRRVTQ 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
             +  + ++G IY+      +  R      + EV    +  Y N 
Sbjct: 156 ETFINLWNRGLIYEASRPTLWCPRCRTALAEAEVEYREEDSYLNY 200


>gi|288941693|ref|YP_003443933.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897065|gb|ADC62901.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 942

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 82/479 (17%), Positives = 143/479 (29%), Gaps = 45/479 (9%)

Query: 23  GHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK-IAKAAQNAGVTTKVFVDQNSRNFR 81
           GH  E  I  V  R+    GL V    G D                     V +  +   
Sbjct: 344 GHGLEDYI--VGQRY----GLAVDNPVGGDGRFLPGTPLFEGENVFKANEHVVEVLKQHG 397

Query: 82  DMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK--GCYSGWYSLRDEAYYN 137
            +        SY    R             +  +  +G          G   + D     
Sbjct: 398 ALLLETRFTHSYPHCWRHKTPIIFRATPQWFISMDKQGLRDTALSEIEGVRWMPDWGQSR 457

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
            + + +G      + Q           +   +  +  K         +  L       V 
Sbjct: 458 IEGMVRGRPDWCISRQRT---------WGVPIPLFVHKETGALHPRTD-ELIELVAKRVE 507

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                    L  +    D G  + D     + VW D+   +                  P
Sbjct: 508 KHGIEAWFALEPADLLADEG-ALYDKVHDTLDVWFDSGVTHACVLE------HRDGLSTP 560

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F +    +  +    P  + +     +  KGEK+SKS GNV+ P +
Sbjct: 561 ADLYLEGSDQHRGWFQSSLMTSVAMHGRAPYRQVLTHGFTVDAKGEKMSKSKGNVVSPQD 620

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V++ +G D +R ++       +    D+     +  AD    I N   R +   L+ +D 
Sbjct: 621 VMKTLGADIIRLWVAATDYRSEMSVSDE---ILKRTADAYRRIRNTA-RFLLANLEGFDP 676

Query: 376 --MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQ 431
                 P    E D   +    R+ QE+    ++   H    +V     V     Y D  
Sbjct: 677 AVNCVAPSEMIELDRWAVDRAHRLQQEVIAAYRDYQFHLIYQKVQQFCVVDLGGFYLDVI 736

Query: 432 KPWEL---KKTNPDR-ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           K  +      + P R   T +Y  +E +   +  L   +   A++I+  +        F
Sbjct: 737 KDRQYTTPADSLPRRSCQTAMYHIIEAM---SRWLAPILSFTADEIWAAIPGERAETIF 792



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 15/154 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N + HIGHA   ++ D++ +   LDG D  +  G D HG  I    + 
Sbjct: 49  PTFILHDGPPYANGEIHIGHAVNKVLKDIIVKSRTLDGFDAPYVPGWDCHGLPIELQVEK 108

Query: 65  AGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             + +  +     R     L +   ++    T +          
Sbjct: 109 KHGKPGHKISAAEFRVACRDYAAKQVDKQRIDFKRLGVLGDWERPYLTMDFGFEAEIIRS 168

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G + KG     + +   +   + EV  
Sbjct: 169 LGRIIANGHLQKGEKPVHWCVDCGSALAEAEVEY 202


>gi|154685959|ref|YP_001421120.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154351810|gb|ABS73889.1| IleS [Bacillus amyloliquefaciens FZB42]
          Length = 921

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 76/463 (16%), Positives = 150/463 (32%), Gaps = 50/463 (10%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI------ 95
           GLDV      DE G   ++A    G+    + D N    + + +   +   +FI      
Sbjct: 341 GLDV--LCPVDEKGVMTSEAPGFEGMF---YDDANKAITQQLDEKGALVKLEFITHSYPH 395

Query: 96  --RTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
             RT +          +   K                    ++  +N             
Sbjct: 396 DWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQ 455

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
            A   P+     E     ++    + +S               N         L     +
Sbjct: 456 RAWGVPIPVFYAENGEPIITDETIEHVSELFRQHG-------SNIWFEKEAKDLLPEGFT 508

Query: 211 RKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                 G       Q IM VW D+ +++                  PADL++ G D    
Sbjct: 509 HPGSPNGT--FTKEQDIMDVWFDSGSSHQAVLEER------DDLVRPADLYLEGSDQYRG 560

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR +
Sbjct: 561 WFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLW 620

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----F 383
           +   +    D       LK+         +   V  +   +  +     P+  A      
Sbjct: 621 V-SSVDYQADVRVSDAILKQ------VAEVYRKVRNTFRFLHGNLFDFNPSVNAVDVKDL 673

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK--T 439
            E D+ +L   ++++ ++++             + +   +     Y D  K     +   
Sbjct: 674 REVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHAD 733

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           +PDR  ++  V  E +  L  L    +P  A++++  L   +E
Sbjct: 734 HPDR-RSMQTVFYETLLALVKLTAPILPHTADEMWSHLSFVEE 775



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R K  +     Y N   H+GHA   I+ D + R+  + G +  +  G D HG  I  A
Sbjct: 45  KDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +     R+    L +  D      T +  +    
Sbjct: 105 LTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG     +S   E+   + E+  
Sbjct: 165 IRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEY 201


>gi|302336827|ref|YP_003802033.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634012|gb|ADK79439.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 806

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +++Y+     YP++Q  H+GH       D+  R+ R++G +VL   G D  G      A 
Sbjct: 38  KRVYVLDMFPYPSSQGLHVGHPEGYTATDIYCRYLRMNGYNVLHPMGFDSFGLPAENYAI 97

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G   K   + N   FR     L  SY  D  I T +  ++   + ++ ++  KG  Y+
Sbjct: 98  KTGTHPKATTESNIDMFRSQIKRLGFSYDWDREISTHKIEYYRWTQWIFLQLFKKGLAYE 157

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    ++EV +G            V       +  +++ Y D+LL   E
Sbjct: 158 SQTPINWCPSCKTGLANEEVKEGK----CERCGAQVTRKNIRQWILKITTYADQLLEGLE 213

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I   +
Sbjct: 214 DLNWSEAIKTMQRNWIGRSE 233



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 105/281 (37%), Gaps = 50/281 (17%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      YL            K  +W P DL+V G +    H +Y   +    
Sbjct: 498 PQWAGSCW--YYLRYLDPHNDKKFASRDKIDYWMPVDLYVGGAEHAVLHLLYSRFWHKVL 555

Query: 280 -----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                ++   P  + V     +   G K+SKSLGNVI+P ++I+E G D++R + +    
Sbjct: 556 HEIGAVNTTEPFQRLVNQGMILGEGGVKMSKSLGNVINPDDIIKEYGADSMRVYEMFMGP 615

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 +  +GL          G+   + R   +  +D     P P            + 
Sbjct: 616 LQVSKPWSTNGL---------AGVHRFLDRVWRLGERDV-IDGPAPDDQ-------KKIL 658

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            + ++++ ++      + A+AQ++  ++E        K  +L +              E+
Sbjct: 659 HQTIRKVSQDTAALEFNTAIAQMMIFINE------MFKSEKLYR--------------EI 698

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQRL 493
                +++  + P LA +++D L   +      +   D+ L
Sbjct: 699 WEPFVLIIAPYAPHLAEELWDRLGHNETLAYEPWPQWDEAL 739


>gi|260463256|ref|ZP_05811457.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030846|gb|EEW32121.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 989

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 99/260 (38%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + ++ T              WPAD+++ G D     FH+    + 
Sbjct: 581 WRQVMDILDVWFDSGSTHVFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLLESC 634

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    V     +   G K+SKSLGN + P +VI++ G D LR ++V      +D
Sbjct: 635 GTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVVTTDY-WED 693

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K+ L+   N D    + N V   +  +  D DG      A  E +  +L   S + 
Sbjct: 694 QRLGKNVLQ--TNIDAYRKLRNTVRWMLGTLAHD-DGENVPLEAMPELERLMLHRLSELD 750

Query: 399 QEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEV 454
           + +R+        R    +I    V     YFD +K        ++  R ++V  V   +
Sbjct: 751 EVVRQGYDAFEFKRITRALIDFMVVELSAFYFDIRKDALYCDAPSSAKRKASVQ-VVRHL 809

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L   L   +P    + +
Sbjct: 810 FDCLVKWLAPMLPFTMEEAW 829



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 27/63 (42%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GRTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSNYVPGWDCHGLPIEWKI 112

Query: 63  QNA 65
           +  
Sbjct: 113 EEQ 115


>gi|226321569|ref|ZP_03797095.1| leucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226232758|gb|EEH31511.1| leucyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 840

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ +  +G       + V+      +  +++ Y ++LL+ 
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTPNGPKSERGFHNVEKKYLRQWVLKITKYAERLLND 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 135/395 (34%), Gaps = 93/395 (23%)

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 +   + F    Y  + +          +P+E+ +  +   ++     S + ++ 
Sbjct: 417 KETVTYKLRDWVFSRQRYWGEPIPILFDKLGNAIPLEKNDLPLKLPETANYKPSGTGESP 476

Query: 215 DWGIKIPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHV 262
              IK   +            M  W  +   YL         +  +  K ++W P DL++
Sbjct: 477 LSRIKDWVNVKDTDFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANHKKIEYWMPVDLYI 536

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG--------- 300
            G +    H +Y   +         ++   P  K      + +  +    G         
Sbjct: 537 GGAEHTVLHLLYSRFWHKVLYDLGHVNTKEPFKKLINQGIITAFSYQKENGVLIPNDQVI 596

Query: 301 -------------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
                               K+SKSL NVI+P ++I+E G D++R + +          +
Sbjct: 597 EKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPW 656

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +  G+          G+   +++  ++  K+     P         + I+S   +V++++
Sbjct: 657 NTKGII---------GVFRFLNKIWNLREKELSKDNPP--------KEIMSQLHKVIKKV 699

Query: 402 RENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            E+ +    + A++ ++  ++E+ +Y                        + + +   I+
Sbjct: 700 TEDTEKLNFNTAISAMMIFINELSKY--------------------EKNYLNIFKPFIII 739

Query: 462 LQAFVPKLANKIFDILFVAD---ENRCFQSLDQRL 493
           L  + P L+ ++++ +       +N  +   D+ L
Sbjct: 740 LSPYAPHLSEELWEYIGETPSLFKNSKWPKFDETL 774


>gi|22536664|ref|NP_687515.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76788204|ref|YP_329219.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77405574|ref|ZP_00782664.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|81454978|sp|Q8E177|SYI_STRA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84029569|sp|Q3K2N4|SYI_STRA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|22533504|gb|AAM99387.1|AE014214_1 isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76563261|gb|ABA45845.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77175796|gb|EAO78575.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 930

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           + +    IM VW D+ ++      +    +  +   +PADL++ G D     F++    +
Sbjct: 517 LFEKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    
Sbjct: 571 VAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILS 392
           D     D LK+             +  ++  ++ +     P   A         D  +  
Sbjct: 630 DVRISMDILKQTSET------YRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTI 683

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRAST 446
             ++V+  I +             V++   V     Y D  K     +        R  T
Sbjct: 684 KFNQVVDTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQT 743

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V Y   +++ +L  LL   +P  A +I+  L   +E 
Sbjct: 744 VFY---DILVKLTKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTPDYEADQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|188575772|ref|YP_001912701.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520224|gb|ACD58169.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 926

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 584 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 643 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALEDMVLLDRWIVHRAHELQEKIV 699

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 700 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 759

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A++++  L      N  F +    L P
Sbjct: 760 RWIAPVMSFTADELWGYLPGKHVGNVLFATWYGGLAP 796



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 31  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKCLAGFDAPYIPGWDCHGLPIEIAI 90

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 91  EKKYGKVGVKLDAAEFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 150

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 151 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 186


>gi|77408400|ref|ZP_00785140.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77414696|ref|ZP_00790829.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159256|gb|EAO70434.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77173003|gb|EAO76132.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 930

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           + +    IM VW D+ ++      +    +  +   +PADL++ G D     F++    +
Sbjct: 517 LFEKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    
Sbjct: 571 VAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILS 392
           D     D LK+             +  ++  ++ +     P   A         D  +  
Sbjct: 630 DVRISMDILKQTSET------YRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTI 683

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRAST 446
             ++V+  I +             V++   V     Y D  K     +        R  T
Sbjct: 684 KFNQVVDTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQT 743

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V Y   +++ +L  LL   +P  A +I+  L   +E 
Sbjct: 744 VFY---DILVKLTKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTPDYEADQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|77411442|ref|ZP_00787788.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162528|gb|EAO73493.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 930

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           + +    IM VW D+ ++      +    +  +   +PADL++ G D     F++    +
Sbjct: 517 LFEKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    
Sbjct: 571 VAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILS 392
           D     D LK+             +  ++  ++ +     P   A         D  +  
Sbjct: 630 DVRISMDILKQTSET------YRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTI 683

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRAST 446
             ++V+  I +             V++   V     Y D  K     +        R  T
Sbjct: 684 KFNQVVDTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQT 743

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V Y   +++ +L  LL   +P  A +I+  L   +E 
Sbjct: 744 VFY---DILVKLTKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTPDYEADQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|261367027|ref|ZP_05979910.1| isoleucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571145|gb|EFB76680.1| isoleucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 924

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 115/384 (29%), Gaps = 28/384 (7%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
             W+            +        E  Y   +         ++     V+    +    
Sbjct: 408 HCWRCHHPIIFRATEQWFCSIDAFKEDVYKAIDSVHWQPAWGHDRMTGMVR-DRSDWCIS 466

Query: 168 RLSAYQDKLLSYYESHPEFILPI----------ERRNEVISFVKSGLKDLSLSRKTFDWG 217
           R   +   +  +Y                     R+    ++ K    ++    +  + G
Sbjct: 467 RQRVWGVPIPVFYCKKCGKYHITDASIKAVSDLFRKEGSDAWYKYDANEIMPKTEVCECG 526

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
               +    IM VW D+ + +                 WP D+++ G D     F +   
Sbjct: 527 ASDWEKDPDIMDVWFDSGSTWSAVCRERP------ELTWPVDMYMEGADQFRGWFQSSLL 580

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                    P  + +     +  +G+++ KS GN ++P E+I + G D +R ++      
Sbjct: 581 TCVATQGIAPYREVLCHGWVVDAQGKQMHKSAGNGMEPSEIIRDYGADIIRLWVASSDYT 640

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSV 393
             D    K+    R  ++    + N   R +   L D+D            E D   L  
Sbjct: 641 V-DVRAGKEIF--RQLSEAYRKMRNTA-RFMLGNLSDFDPNKDAVADDQLYEIDRWALEA 696

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
           C+ +   +R+   +    RA   + +   +   + Y D  K   L   +           
Sbjct: 697 CNALTATMRDAYDHYDFSRAYHALYNFCVIDMSNFYMDVIKD-RLYCADDHARRCAQTAL 755

Query: 452 VEVIRQLAILLQAFVPKLANKIFD 475
             ++     LL   +   + +I+ 
Sbjct: 756 YRILVDFTKLLAPILCFTSQEIWS 779



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 15/162 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     Y N   H+G A   II D++ R+  + G    +  G D HG  I   
Sbjct: 47  EGKPRYILHDGPPYANGSIHMGTALNKIIKDIIIRYKNMAGFQAPYVPGYDTHGLPIELK 106

Query: 62  A-------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
           A                    K F  ++     D    L +  D      T         
Sbjct: 107 ALGSLGDKKSGVSKLELRKICKEFATEHIGVMNDQFKRLGVQGDFENPYLTLRPEFEARQ 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
             ++ +++ KG IYKG  + ++   D     + E+    D  
Sbjct: 167 VEIFGEMAKKGYIYKGMKAVYWCPEDRTALAEAEIEYAEDEC 208


>gi|218884364|ref|YP_002428746.1| valyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765980|gb|ACL11379.1| valyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 817

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 26/399 (6%)

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +           E +    +            +  P+   ++   +    +    +    
Sbjct: 360 RCKTPIQIVNSREWFLKQLDFRDELLKIIDQIEFKPLMHKKKLVDWINSVSTDWPISKDR 419

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP-------QYIMYVWID 233
               E  L    +   I   + G                +   P       + +   W D
Sbjct: 420 YYATEIPLWKCSKCGSILLPEPGKYYRPWREPAPWDKCPVCGAPREYLVGEKKVFDTWFD 479

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVF 291
           +  + L  T Y+ +P     K +   L   G+DI+R    Y     + L+          
Sbjct: 480 SSISVLYVTHYIRDPV-LFEKAFKYTLRPQGQDIIRTWLYYSILRVYQLTGKPAFKWVRI 538

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           +   +  KGE + KS GNVIDP   +E+ G DA R++       G D  + +  LK  + 
Sbjct: 539 TGMGLDEKGEAMHKSKGNVIDPDPYVEKYGADAFRFWAAISAKLGYDYRFSEQTLKTGLY 598

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIH 411
              A  + N+     S          P        D++ L+   +++++I +      ++
Sbjct: 599 --FATKLWNIARYISSF-------PEPKEYRLRGIDKATLAYLDKIIEKIDKAYSELDVY 649

Query: 412 RALAQVISLVS--EVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             + ++           Y +  K        K N        +     ++ +   L   +
Sbjct: 650 EPVNEIYQFTWNYFASHYIELTKSRAYNRDGKYNELEQKAAWFTLHYTLKSILKALAPIM 709

Query: 467 PKLANKIFDILFVA--DENRCFQSLDQRLKPGFMLHKTF 503
           P + + I+  L+       R  +   +RLK    L +  
Sbjct: 710 PFITDAIYRELYGRSIHLERFPEPDRERLKQPHNLVEKV 748



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 19/166 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE + I T   Y + + H+G A      D++AR+ R+ G +VL     D +G  +    
Sbjct: 46  NREIIAIDTPPPYASGKWHVGGAAHYTQIDMIARYFRMKGYNVLVPFYADRNGLPVEVQV 105

Query: 62  -------AQNAGVTTK--VFVDQNSRNFRD--------MADVLDISYDDFIR-TTEKRHH 103
                        T +      +  R F D        +   L  S+  +   T  + + 
Sbjct: 106 EKTYKVNPHELSATPEGREHFLKLCREFLDKAEGELVNVWRRLGCSFQYWRNGTDSEEYR 165

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
              +  + ++  +G IY+      +  R      D E+    +  Y
Sbjct: 166 RITQATFIELYKRGLIYEAERPVNWCPRCRTSLADAELEYNEEETY 211


>gi|293392921|ref|ZP_06637238.1| isoleucine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424455|gb|EFE97667.1| isoleucine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 938

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 111/346 (32%), Gaps = 39/346 (11%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            W +        +     +           L + +  E +      L +    R     G
Sbjct: 446 DWGQARIEMMVANRPDWCISRQRTWGVPMSLFVHKDTEQLHPRSVELMEEVAKRVE-QDG 504

Query: 218 IKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           I+   D Q                  + VW D+ + + +         G       AD++
Sbjct: 505 IQAWWDLQPADILGAEAADYVKVPDTLDVWFDSGSTHASVVDVRPEFHGHG-----ADMY 559

Query: 262 VIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + G D     F +    +  +    P  + +     +  +G K+SKS+GN I P +V+ +
Sbjct: 560 LEGSDQHRGWFMSSLMISTAMKGKAPYKEVLTHGFTVDGQGRKMSKSIGNTISPQDVMNK 619

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP- 378
           +G D LR ++      G+    D+  + KR     A      +  +   +L + +G  P 
Sbjct: 620 LGGDILRLWVASTDYTGEIAVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPS 672

Query: 379 ----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
                P      D   +        +I +   N   H  + +++   S      Y D  K
Sbjct: 673 RDCVAPDEMVVLDRWAVGRAQAAQLDIEQAYANYDFHEVVQRLMQFCSVEMGSFYLDIIK 732

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +   K++     +       +   L   +   +   A++I+  L
Sbjct: 733 DRQYTAKSDSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWGFL 778



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGMSGFDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLYGKPGEKLSAAEFRQKCREYAAEQVEGQKKDFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI   G + KG     +     +   + EV  
Sbjct: 166 IRALGKIISNGHLLKGAKPVHWCTDCGSSLAEAEVEY 202


>gi|224541716|ref|ZP_03682255.1| hypothetical protein CATMIT_00888 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525320|gb|EEF94425.1| hypothetical protein CATMIT_00888 [Catenibacterium mitsuokai DSM
           15897]
          Length = 911

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 124/393 (31%), Gaps = 23/393 (5%)

Query: 90  SYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           SY    RT +        +        +  +     S  +          + +    D  
Sbjct: 386 SYPHDWRTKKPIIFRATDQWFCSIDKIREKLLSEIDSVNWINEWGHIRIYNMIKDRGDWC 445

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
               +             F        +      H   +      N      +  L    
Sbjct: 446 ISRQRT-----WGVPIPIFYCEDGTPVIDQKVFDHVSALFREFGSNVWFERDEKDLLPEG 500

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            + +    GI      + IM VW D+ +++             +   +PADL+  G D  
Sbjct: 501 YTNEHSPNGI--FKKEKDIMDVWFDSGSSHTGVLV-------ERGLGYPADLYFEGSDQY 551

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F++       +    P    +     +  KG K+SKS GN +DPI+ I + G D LR
Sbjct: 552 RGWFNSSLIIGTAVHGKAPYKTVLSHGFTLDGKGLKMSKSGGNAVDPIKTINKWGADILR 611

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            +    +    D     D LKK   ++    + N +   +  +    D  +         
Sbjct: 612 LW-ATTVDFQSDVRISDDILKKV--SESYRKVRNTMRFLLGNLNDFKDTDVLPVNQLEPV 668

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKP-WELKKTNPDR 443
           D+ +L+  + ++    ++M +     A  ++++  +      Y D  K    ++K +  R
Sbjct: 669 DQYMLAKLNDLMDAYHKSMDSYNFSEANKEILNYFTNTLSAFYMDFTKDILYIEKADSTR 728

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              V  V     + +  L+   +   A ++ D 
Sbjct: 729 RRQVQTVLYHHAKTMMKLISPILVFTAEELHDH 761



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +E         Y N   H+GH    +I DV+ R+  ++G    +  G D HG  I  A
Sbjct: 37  EGKEHFIFHDGPPYANGNMHVGHMLNKVIKDVICRYKNMEGFYTPYIPGWDTHGLPIENA 96

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
            Q  GV  K             +  +           +    D      T  K       
Sbjct: 97  IQKQGVDRKSMSTAKFREKCYAYALKQVERQMQQCIRVGTFADYKHPYLTLHKEFEARQI 156

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K++  G IYKG    ++S   E+   + EV   
Sbjct: 157 DVFAKMAVDGLIYKGLKPVYWSPSSESALAEAEVEYH 193


>gi|303280587|ref|XP_003059586.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459422|gb|EEH56718.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1061

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 77/213 (36%), Gaps = 26/213 (12%)

Query: 2   KEREKLYISTAIAYP------NAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG 55
             + K Y      YP       A  H+GH       D++AR+ R+ G +VL   G D  G
Sbjct: 136 TTKPKFYALDMFPYPRRVVAAGAGLHVGHPEGYTATDIVARYKRMTGHNVLHPMGWDAFG 195

Query: 56  QKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKR------------ 101
               + A   G   +     N   FR+    L  SY  D  + T E +            
Sbjct: 196 LPAEQYAIETGTHPRDTTVANVARFREQLQSLGFSYDWDREVATCEPQVRSIHWFPYDSV 255

Query: 102 --HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
             ++   + ++ K+ +KG  Y+      +         ++EV  G         ++PV  
Sbjct: 256 GVYYKWTQWIFLKLLEKGLAYRAEVPVNWCPALGTVLANEEVIDG----LSERGNHPVIR 311

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
              + +  +++AY D+LL         I P  R
Sbjct: 312 KPMKQWMLKITAYGDRLLRRVVLTLVPIRPRSR 344



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 39/195 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GNV++P ++++  G D+LR + +      +   +   G++             
Sbjct: 833 HKMSKSRGNVVNPDDIVDAYGADSLRLYEMFMGPLRETKVWQTKGVEG------------ 880

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             SR ++   + +DG I    A    DE+ L   ++ + ++ E  +    + A+A ++  
Sbjct: 881 -CSRFLARAHRLFDGDISDESA----DEAQLKEINKCVAKVTEETEGMRFNTAIAAMMEF 935

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +   ++   +KP                   E +R  A+LL  + P L+ +++  L   
Sbjct: 936 TNAATKW--EKKPR------------------ECLRPFALLLSPYAPHLSEELWTKLGNE 975

Query: 481 DEN--RCFQSLDQRL 493
             N    +   D+ L
Sbjct: 976 GSNAYETWPVADESL 990


>gi|222478457|ref|YP_002564694.1| valyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451359|gb|ACM55624.1| valyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 892

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/446 (16%), Positives = 144/446 (32%), Gaps = 35/446 (7%)

Query: 39  RLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT 98
                D+      DE G     A    G+      D+      +  D      D    T 
Sbjct: 289 WYQVHDLNLRVAIDESGHMTDVAEGYEGMH----ADEAREAIVEDLDGAGALLDRRDITH 344

Query: 99  EKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
               H+ C    + +     + +  Y       DE      E+    +  +   +H    
Sbjct: 345 TVNVHERCGTSVEFL-----VTEQWYVEMLDKTDEYLEIGREMEWSPEKMFTRYEH---- 395

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           W+E   + + +S  +   + +   + E         E        L D        + G 
Sbjct: 396 WVEGLQWDWLISRQRSSGIPFPVWYCEDC-GEIVVAEKADLPVDPLSDDPPVDACPECGH 454

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDN-----PDGSKAKFWPADLHVIGKDILRFHAI 273
              +    ++  W  +    L   G+  +           + +  DL   G DI+ F   
Sbjct: 455 DEFEPEDDVLDTWATSSLTPLINAGWDWDEDAGEFTMEHPELYQFDLRPQGHDIISFWLF 514

Query: 274 YW--PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +     +  +  +P  + + +   +    EK+SKS+GNV++P  V+ E  VDA RY+   
Sbjct: 515 HTLVKCYEHTGEVPFEETMINGHVLDENREKMSKSVGNVVEPEAVLAEFPVDATRYW-AA 573

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
             A G D  + +  L  R    L   + N      S+  + Y    P      E D  +L
Sbjct: 574 GTAVGDDFPFKEKDL--RAGEKLIRKLWNASKLVESLAPEPY-PDTPADEDLRELDRWLL 630

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLY 449
           +     ++ +    +++   +A  ++ S       D Y +      + K   D A+   Y
Sbjct: 631 AELDDRIERLTGLFEDRAFSKARDELRSFFWNTFCDDYLE------IVKQREDDAAA--Y 682

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFD 475
                 R+   L    +  +  +++ 
Sbjct: 683 TLRTAHRRFLKLFAPLLAHVTEELWH 708



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I T     +   H+GH Y   + D +ARF R++G +  F  G D++G    +  ++  
Sbjct: 39  FSIDTPPPTVSGSLHMGHLYGFTLQDFVARFERMNGGETFFPFGYDDNGIASERLTEDEL 98

Query: 66  ------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCRILWK 111
                           +    +    F +    L +S  +D   +T E R     ++ + 
Sbjct: 99  DIRHQDFERREFQAKCREVCAEYEAQFTENVQSLGVSVDWDHTYQTIEPRVQRISQLSFL 158

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            + D+G  Y+      +    E   +  E        +++    PV
Sbjct: 159 DLYDQGREYREKAPAIWCPECETAISQVETEDDEQASHFHDIAFPV 204


>gi|75401346|sp|Q8L1B1|SYI2_PSEFL RecName: Full=Isoleucyl-tRNA synthetase 2; AltName: Full=IleRS-R2;
           AltName: Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|22093796|dbj|BAC07171.1| isoleucyl-tRNA synthetase 2 [Pseudomonas fluorescens]
          Length = 1030

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 136/413 (32%), Gaps = 65/413 (15%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            +     +  +     NP+ +   E +F R SA +++L+    +     +P   +     
Sbjct: 378 KQEQIEHNYPHCWRCDNPLIYRAVESWFIRASALREQLVEN--NSQVNWVPEHVKEGRFG 435

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQ------------------------------- 225
                 +D ++SR  F WG  I +    Q                               
Sbjct: 436 DWIRNARDWAVSRNRF-WGAPIPVWRCDQCGTVEVMGSIAQIEARSGRKVEDLHVPHIDE 494

Query: 226 ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI--GKDI 267
                            +   W ++      +  Y         + +PAD  V    +  
Sbjct: 495 HRFACQCCEGTMSRVTGVFDCWFESGAMPFASRHYPFENKQEFEQTFPADFIVEYLAQTR 554

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   +       P    +     +   G K+SK L N  +P+++++  G DALR 
Sbjct: 555 GWFYTMMVISTGCFEQNPFKNAMCHGVILAKDGRKMSKRLKNYPNPMDLMQTHGSDALRV 614

Query: 328 FLVREIACG-KDGFYDKD---GLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGA 382
            L+    C  +D  + ++    + +R +    N +    + + +       D   P    
Sbjct: 615 ALLASPVCKGEDIKFSEESVRDVVRRYHLLFWNCLQFYKTFTEIDQFSPSGDLGQPLDNV 674

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD-RYFDAQKPWELKKTNP 441
               D  +L   + +  +I+  M++    +  +++   ++ +   Y    K    +    
Sbjct: 675 L---DHYLLHELAALESDIKMWMESLDFSKIYSRIEVFINVLSTWYLRLNKARIWRDGLD 731

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQR 492
           D       V    +   A LL  F+P LA  ++  L  AD    + + S+D++
Sbjct: 732 DDKRQCYEVLHYALSNFARLLAPFMPFLAEAVYTELGYADSVHLQDWPSIDRQ 784



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +          +    PH GH     I DV+ R+  + G  V    G D HG  +   
Sbjct: 36  EGKPVYVFYDGPPFATGLPHYGHILTSYIKDVIPRYQTMLGKQVPRRWGWDCHGLPVEFE 95

Query: 62  AQNAG-----------------VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A                     +  V + + ++R   + +   + +D   +T +  +
Sbjct: 96  VEKAMGFKSKRDILEFGVEQFNDECRELVLKYADDWRGFVNRMGRWVDFDGAYKTMDNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++    +K + DKG +Y+G     Y +R +   ++ E
Sbjct: 156 MESVLWGFKTLHDKGHVYEGGKIVPYCVRCQTVLSNFE 193


>gi|227497475|ref|ZP_03927704.1| valine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833049|gb|EEH65432.1| valine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 1002

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 107/286 (37%), Gaps = 20/286 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           IM  W  +  +    +G+L++ D   A+ +P DL   G+DI+     +    A L    L
Sbjct: 616 IMDTWATSSLSPQLVSGWLEDED-LFARVYPMDLRPQGQDIIRTWLFSSVVRADLEFGAL 674

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P+ ++++ G DA+RY+       G D  +  +
Sbjct: 675 PWKHAGISGWILDSDHKKMSKSKGNVVTPMGLLDKYGSDAVRYW-AASARLGLDPAF--E 731

Query: 345 GLKKRVNADLANGIGNLVSRSVSM-ILKDYDGMI----PTPG-----AFTESDESILSVC 394
             + +V   LA  + N    ++SM +  D D       P P           D ++L+  
Sbjct: 732 EAQIKVGRRLAIKVLNASKFALSMGVPWDADEATLAAVPAPSLDVTKVTEPIDRAVLAAL 791

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKT---NPDRASTVLYV 450
           + V+             RAL    S      D Y +  K          +    ++    
Sbjct: 792 AGVVDTATAAFDRYEHARALEATESFFWTFCDDYIELVKDRANDFEGTHDAAAVASARTT 851

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
               +     L   F+P +  +++        +R      + L+ G
Sbjct: 852 LAIAVDTFVRLFAPFLPFVTEEVWSWYRTGSVHRAAWPTAEGLRAG 897



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
             I T     +   H+GH +     D +AR+ R+ G+ V +  G D++G    +  QN
Sbjct: 120 YSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMRGMSVFYPMGWDDNGLPTERRVQN 177


>gi|225868956|ref|YP_002744904.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702232|emb|CAW99977.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 932

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 23/274 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           +      IM VW D+ ++      +    +      +PADL++ G D     F++    +
Sbjct: 517 VFTKETDIMDVWFDSGSS------WNGVMNARDHLAYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        
Sbjct: 571 VAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           D     D L +   ++    I N + R +     D++              D+ +    +
Sbjct: 630 DVRVSMDILGQV--SETYRKIRNTL-RFLLANTSDFNPHTDKVAYAELAAVDKYMTIKFN 686

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLY 449
           +++  I    +          V++   V     Y D  K     +        R  TV Y
Sbjct: 687 KLVGAINAAYERYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLARRRMQTVFY 746

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              +++  +  LL   +P  A +I+  L    E+
Sbjct: 747 ---DILVNITKLLTPILPHTAEEIWSYLEHEPED 777



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  EGKPVFHLHDGPPYANGNIHVGHALNKISKDIIVRAKSMSGYQAPFVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        RD    L +S  +D+   T +        
Sbjct: 105 LAKKGVKRKEMDLADYLEMCRQYALSQVDKQRDDFKRLGVSADWDNPYVTLDPSFEADQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANRV 214


>gi|1061310|gb|AAA81332.1| valyl-tRNA synthetase [Homo sapiens]
          Length = 1063

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 114/376 (30%), Gaps = 48/376 (12%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               ++    N  +W      ++        +     + P    P  R            
Sbjct: 505 HQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAR 564

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           +  +         I +  D   ++  W  +    L+  G+ +  +   + F+P  L   G
Sbjct: 565 EKAAKEFGVSPDKISLQQDED-VLDTWFSSGLFPLSILGWPNQSE-DLSVFYPGTLLETG 622

Query: 265 KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
            DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 623 HDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISL 682

Query: 319 ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                            E G DALR+ L   ++ G+D   D + 
Sbjct: 683 QGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNR 742

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +         N + N    ++  + K +         G  +  D  I S  +  ++   +
Sbjct: 743 ILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQ 800

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
             Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 801 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVAAECARQTLYTCLDVGLRL 859

Query: 462 LQAFVPKLANKIFDIL 477
           L  F+P +  ++F  L
Sbjct: 860 LSPFIPFVTEELFQRL 875



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 137 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 196

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
              +                  + ++           L   + +D    T + +      
Sbjct: 197 WREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVT 256

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
             + ++ ++G IY+      +S    +  +D EV
Sbjct: 257 EAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEV 290


>gi|150404063|gb|ABR68345.1| methionyl-tRNA synthetase [Lactobacillus casei]
          Length = 212

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 3/120 (2%)

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT--NPDRASTVLYVT 451
               L +  + M        L QV  +VS  ++Y D  +PW L K     D+   V+   
Sbjct: 1   AQAALAQYHKLMDELRFSDVLDQVWKIVSRANKYIDETEPWNLAKDPAKKDQLDAVMAHL 60

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR-LKPGFMLHKTFDPIFPRF 510
            E +R +A+L+Q  +     +IF  L +  EN   + +    L  G  + +   PIFPR 
Sbjct: 61  AESLRLIALLIQPVMTHAPLQIFGQLGLDHENDDHKLVQWGALPAGVKVVEQGTPIFPRL 120


>gi|311107263|ref|YP_003980116.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310761952|gb|ADP17401.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 953

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 22/286 (7%)

Query: 228 MYVWIDALTNYLTT---TGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + VW D+ + + T                  WPADL++ G D     FH+      +L  
Sbjct: 544 LDVWFDSGSTHATVLGGKDGDFAGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYG 603

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  +G K+SKS+GNVI P +V + +G + LR ++      G+     
Sbjct: 604 QPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGE-LSIS 662

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
            + LK+ V  +    I N + R +   L D+D +      G   E D   L++ +++  E
Sbjct: 663 DEILKRVV--EGYRRIRNTL-RFLLANLADFDAVTQAVPYGELFEIDRYALAMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQ 457
           ++ N +    H A++++ +  SE     Y D  K          RA  +     +++ + 
Sbjct: 720 VQANYERYDFHPAVSRLQTFCSEDLGAFYLDILKDRLYTSAVDSRARRSAQTALLDITQT 779

Query: 458 LAILLQAFVPKLANKIFDIL------FVADENRC--FQSLDQRLKP 495
           L  L+   +   A + +  L        AD  R   F  +   L P
Sbjct: 780 LLKLMAPILSFTAEEAWKELVNSALKNQADAARTTIFTEVYHALPP 825



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     R     L +   +D    T    +       
Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLGVLGEWDRPYMTMNFSNEADEIRA 164

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I DKG +++G     +     +   + EV  
Sbjct: 165 LGRILDKGYVFRGLKPVNWCFDCGSALAEAEVEY 198


>gi|259907374|ref|YP_002647730.1| isoleucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962996|emb|CAX54479.1| Isoleucyl-tRNA synthetase 1 [Erwinia pyrifoliae Ep1/96]
 gi|283477205|emb|CAY73112.1| ileS [Erwinia pyrifoliae DSM 12163]
          Length = 938

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMALFVHKDTEQLHPDSLELMEKVAVRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ +   +         G+     
Sbjct: 501 E-QDGIQAWWDLDARELMGADADNYVKVPDTLDVWFDSGSTSYSVVDERPEFGGNA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
             DL++ G D     F +    +  +    P  + +     +  +G K+SKSLGN I P 
Sbjct: 556 -PDLYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L +  
Sbjct: 615 DVMNKLGADILRLWVASTDYSGE-IAVSDEILKRSADS------YRRIRNTARFLLANLA 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +S       +I  + +    H  + +++   S      Y
Sbjct: 668 GFNPETDKVKPEEMVVLDRWAVSRALAAQNDIVASYEAYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 728 LDIIKDRQYTAKADGLARRSCQTALWYIAEALVRWMAPIMSFTADEIWGYL 778



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTTKV 71
            +        
Sbjct: 106 VEQTIGKPGE 115


>gi|209559678|ref|YP_002286150.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540879|gb|ACI61455.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 918

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 104/281 (37%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 503 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 556

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 557 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 615

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 616 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 672

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 673 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 731

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 732 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLTE 768



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 31  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 90

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        R+    L +S D      T + +       
Sbjct: 91  AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRNDFKRLGVSADWENPYVTLDPQFEADQIR 150

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 151 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 199


>gi|256376783|ref|YP_003100443.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
 gi|255921086|gb|ACU36597.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
          Length = 542

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 99/552 (17%), Positives = 182/552 (32%), Gaps = 69/552 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M       +  A    N   H+GH A   + ADV AR+ +  G  V++TT TD+    + 
Sbjct: 1   MTTARPAVVIAATPTSNGDLHVGHLAGPYLSADVYARYLKATGRPVVYTTCTDDSQSYVV 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISY-------DDFIRTTEKRHHD-------- 104
             A   G+  +  V  ++                     + + RT      +        
Sbjct: 61  STAHRRGLAPEELVRTSTEQISRSLAAAGTLVPGLPPIDERYRRTVLDYLLELHAAGRFQ 120

Query: 105 --TCRILWKKISDKGDI-------YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             T R+ + K +               C SG      E   + +   +  D +Y     +
Sbjct: 121 PRTVRLPYAKNAGVFLYDGLVSGTCPVCLSGSCGGACENCGHPNNFDELIDPKYTIDPSD 180

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV + E+      L  Y+++L SYY S      P  ++       +           ++ 
Sbjct: 181 PVVYREQRILVLPLEEYRERLSSYYASRTPRWRPHAKQLIGELLARPLPDVPVTFPGSWG 240

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGY----LDNPDGSKAKFWPAD-----LHVIGKD 266
                P+ P  I+Y WI+A+   + +T +      NP G+  + W A+     ++  G D
Sbjct: 241 IPAPFPETPGQIVYPWIEAVPAAMYSTWWAATEQGNPPGAADELWRAESGAELVYFHGFD 300

Query: 267 ILRFHAI--YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
            +    +               P     + F   +GEK S S G++I   ++  EV  D 
Sbjct: 301 NVYHWGLVDLVMLMAHGDRYTTPDANVCNEFYDLEGEKFSTSRGHLIWGADLFAEVPRDL 360

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT 384
           +R++L       +   + ++ L       L +   N ++ + S++L         P   T
Sbjct: 361 VRFYLALTAPEFQRTNFSREQLHSVTTRRLVDPW-NSLADTTSLVLGGVVDGTALPT--T 417

Query: 385 ESDESILSVCSRVLQEIRENMQ--NQLIHRALAQVISLVSEVDRYFDAQKPWELKKT-NP 441
           E+        + + +  R   +     + RA    I+            +   L +T +P
Sbjct: 418 EAGR---RRAAAMDERFRLCYELPGFTLGRAAETAIT---------QLARLRALAETVDP 465

Query: 442 DRAS---TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM 498
            R     T     +   R L       +   A ++   L V         L    +P   
Sbjct: 466 ARNGHSPTAPGDLLLEARTLLAWTAPILVDTAERL-TGLGVD--------LALGGRPATE 516

Query: 499 LHKTFDPIFPRF 510
           +       FPR 
Sbjct: 517 VPAFR---FPRL 525


>gi|261337725|ref|ZP_05965609.1| isoleucine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277175|gb|EFA23029.1| isoleucine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 1122

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 106/300 (35%), Gaps = 22/300 (7%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            I+  +  + +L+        G         ++  W ++ +       Y         + 
Sbjct: 560 NINMHRPFIDELTRPNPDDPTGKSTMRRITDVLDCWFESGSMPFAQFHYPFENKQYFEEH 619

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +P+D  V  IG+    F+ ++  A  L  + P  K V  HG +L + G+K+SK L N  D
Sbjct: 620 FPSDFVVEYIGQTRGWFYLLHVMATALF-DKPAFKNVICHGIVLGNDGQKMSKHLRNYPD 678

Query: 313 PIEVIEEVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +    +DG++  V + +          ++     
Sbjct: 679 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTEDGIRDTVRSIMLPVWSTYYFFTLYANAA 738

Query: 372 D----YDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           +    YD    +          D  +L+   +++ ++  ++    I  A A+V   +   
Sbjct: 739 NGGQGYDARKLSADEVPGLPAMDRYLLARTRKMIAQVTADLDAFAIADACAEVAEFIDVL 798

Query: 424 VDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y      + W                   V+     LL    P  A  ++  L   +
Sbjct: 799 TNWYIRNSRDRFWN-------EDENAFNTLYTVLECFMRLLAPLAPMEAEAVWRGLTGEE 851



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 83  PPFANGLPHYGHLLTGYAKDVIPRYQTMKGHLVNRVFGWDTHGLPAELEAQKELGIDSVE 142

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +V++           +D  +D   +T +  + ++    +K
Sbjct: 143 QIEEMGIDKFNEASRKSVLKYVNEWHDYVDRQGRWVD--FDHGYKTLDLPYMESVMWAFK 200

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++  KG  Y+G     Y  +D+   +  E+   AD
Sbjct: 201 QLYTKGLAYQGFRVLPYCPKDQTPLSAHELRMDAD 235


>gi|289435362|ref|YP_003465234.1| hypothetical protein lse_2001 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171606|emb|CBH28152.1| ileS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 921

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 107/282 (37%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGESPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ +L  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFEPTTNGVSYENLREVDKYMLIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT-NPDRASTVLYV 450
              +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LDDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSKDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYESVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDLPE 784



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  DRPSYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|58337877|ref|YP_194462.1| leucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904527|ref|ZP_04022332.1| leucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311412|sp|Q5FIP3|SYL_LACAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58255194|gb|AAV43431.1| leucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867736|gb|EEJ75157.1| leucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 804

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 79/205 (38%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++  Y      +P+ +  H+GH       D+++R  R  G +VL   G D  G    +
Sbjct: 27  SNKKNYYALDMFPFPSGKGLHVGHPEGYTATDIVSRMKRAQGYNVLHPMGWDAFGLPTEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V    N  NF+   + L  SY  D  + T++  ++   + +++++  KG 
Sbjct: 87  YALKTGEDPEVVTKNNIANFKRQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +S        ++E+  G           PV       +  +++AY D+LL 
Sbjct: 147 AYEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLE 202

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++  P++           G
Sbjct: 203 D-LDDLDWPEPVKEMQRNWIGRSLG 226



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 76/464 (16%), Positives = 146/464 (31%), Gaps = 60/464 (12%)

Query: 54  HGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKI 113
           +G     A          F  +       + +  DI+ + F     +            +
Sbjct: 329 YGTGAVMAVPAHDERDYAFATKFGLPINPVLEGGDITKEAF----TEDGPHINSEFLNGL 384

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
           + K    K           E   N          Q Y  +  PV   E+           
Sbjct: 385 NIKDAKKKMVEWLEEHNCGEKKVNYKLRDWDFSRQRYWGEPIPVIHWEDGETTLVPED-- 442

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
                         LP     +     +S L +L+      D   +        M  W  
Sbjct: 443 ---------QLPLRLPHATDIKPSGTPESPLANLTDWVNVVDENGRKGKRETNTMPNWAG 493

Query: 234 ALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--------LS 281
           +   YL      ++          K+ P DL++ G +    H +Y   +         + 
Sbjct: 494 SSWYYLRYVDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVP 553

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +          +
Sbjct: 554 TKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEMFMGPLDASIDW 612

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDESILSVCSRVLQE 400
           D +G                + R   + + D D   IP      E+D  +  V +  +++
Sbjct: 613 DDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDENDGELDKVYAETVKK 663

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + E+      + A++Q++  ++                    +A T+     E       
Sbjct: 664 VTEDFDALHFNTAISQMMVFMNAA-----------------QKAKTIPR---EYAEGFVK 703

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
           LL    P +  +I+ +    DE+  +        P  ++  T +
Sbjct: 704 LLAPVAPHMMEEIWQVFG-HDESISYAEWSTY-DPAKLVESTVE 745


>gi|326797979|ref|YP_004315798.1| leucyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326548743|gb|ADZ77128.1| leucyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 927

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH    I +DV +R+ RL G +VL   G D  G    +
Sbjct: 28  SDKPKYYVLDMFPYPSGAGLHVGHPLGYIASDVFSRYKRLRGYNVLHPMGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N + +R+  D +  S+D    IRT++  ++   + ++ ++ +   
Sbjct: 88  YAIQTGQHPAITTETNIKRYREQLDNIGFSFDWSREIRTSDPSYYKWTQWIFMQLFNSFY 147



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 79/200 (39%), Gaps = 42/200 (21%)

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
               H+ EK+SKS  NV++P ++IE+ G D LR + +      +   ++ +G++      
Sbjct: 692 YVCGHEVEKMSKSKFNVVNPDDIIEQYGADTLRMYEMFLGPLEQSKPWNTNGIEG----- 746

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
             +       R       ++      P       ++ L    ++++++ ++++    + +
Sbjct: 747 -VHKFLRKFWRLFHDASSNFSVSDEIPT------KAELKSLHKIIRKVEDDIERFSFNTS 799

Query: 414 LAQVISLVSE-----VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           ++  +  V+E      ++                RA         ++R L I+L  + P 
Sbjct: 800 VSSFMICVNELTDLRCNK----------------RA---------ILRDLVIVLSPYAPH 834

Query: 469 LANKIFDILFVADENRCFQS 488
           +  +++ +L     +  + S
Sbjct: 835 ICEELWVLLGNEPGSLSYTS 854


>gi|261868577|ref|YP_003256499.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413909|gb|ACX83280.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 940

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 46/394 (11%)

Query: 118 DIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAY 172
           D  K  Y   +  +    +    + + G + Q    Q       V+W+ + G        
Sbjct: 397 DKIKHSYPHCWRHKTPIIFRATPQWFIGMEVQGLRPQALGEIKQVRWIPDWGQARIEKMV 456

Query: 173 QDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFDW-GIKIPDDPQY--- 226
           +++          + +P+      E        L+ L    K  +  GI+   D      
Sbjct: 457 ENRPDWCISRQRTWGVPMTLFVHKETEELHPRTLELLEEVAKRVEKAGIQAWWDLDEKEL 516

Query: 227 -------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + Y +        +G       AD+++ G D     F 
Sbjct: 517 LGADAETYRKVPDTLDVWFDSGSTYSSVVANRPEFEGKA-----ADMYLEGSDQHRGWFM 571

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +       P  + +     +  +G K+SKS+GNV+ P EV+++ G D LR ++  
Sbjct: 572 SSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNVVTPQEVMDKFGGDILRLWVAS 631

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTES 386
               G+    D+  + KR     A      +  +   +L + +G  P      P      
Sbjct: 632 TDYTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPQRDAVKPEEMISL 684

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   ++       EI++   N   H  + +++   S      Y D  K  +   K +   
Sbjct: 685 DRWAVACALEAQNEIKDAYDNYQFHAVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLA 744

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 745 RRSCQTALWHIAEALVRWMAPILSFTADEIWGHL 778



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGTIHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRQKCREYAAEQVEGQKKDFVRLGVLGDWDNPYLTMNFNTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ-WMEEEGY 165
                K+   G +YKG     + L   +   + EV              P +  +E EG 
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDRVSPSIYVRFPAESAVEIEGK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 226 FNAVGKGSGKLSAVIWTTTPWTMPSNRAISVNAELEYQLVQLGDER 271


>gi|156935453|ref|YP_001439369.1| isoleucyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166200207|sp|A7MIM3|SYI_ENTS8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|156533707|gb|ABU78533.1| hypothetical protein ESA_03312 [Cronobacter sakazakii ATCC BAA-894]
          Length = 938

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 129/405 (31%), Gaps = 44/405 (10%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K +      ++      +    + + + D+    A       +   VQW+ + G     S
Sbjct: 398 KLLHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQS---LKEIKGVQWIPDWGQARIES 454

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQ-- 225
              ++          + +P+      E        L+ +    K     GI+   D    
Sbjct: 455 MVANRPDWCISRQRTWGVPMSLFVHKETQELHPRTLELMEEVAKRVEQDGIQAWWDLDPR 514

Query: 226 --------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                           + VW D+ + + +         G       AD+++ G D     
Sbjct: 515 DIMGDDADVYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA-----ADMYLEGSDQHRGW 569

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++
Sbjct: 570 FMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWV 629

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFT 384
                 G+    D+  + KR     A      +  +   +L + +G  P      P    
Sbjct: 630 ASTDYTGEMAVSDE--ILKR-----AADAYRRIRNTARFLLANLNGFDPAKDMVKPEEMV 682

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
             D   +        +I +  +    H  + +++   S      Y D  K  +   K + 
Sbjct: 683 VLDRWAVGCAKAAQDDIVKAYEAYDFHEVVQRLMRFCSIEMGSFYLDIIKDRQYTAKADS 742

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               +       +   L   +   +   A++++  L    E   F
Sbjct: 743 VARRSCQTALYHISEALVRWIAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 59/206 (28%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T +       
Sbjct: 106 VEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFNTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                         
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFNAVDAAAVAAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F        +     +   + LP  R
Sbjct: 226 FGAQNVNGPVSLVIWTTTPWTLPANR 251


>gi|120599901|ref|YP_964475.1| isoleucyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166229772|sp|A1RMM6|SYI_SHESW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120559994|gb|ABM25921.1| Isoleucyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 940

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 130/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   +R     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVANRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEADQYRKVTDTLDVWYDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFDPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E       H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYDQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALFHIAEAMVRWIAPVLSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKITAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVSMVIWTTTPWTLPANR 251


>gi|161486832|ref|YP_505373.2| isoleucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 1096

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 75/457 (16%), Positives = 145/457 (31%), Gaps = 40/457 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRH 102
               D+ G   A  +  AG       D+     ++    L+ S     Y    RT     
Sbjct: 367 ICPIDDAGVYTAAISDFAGCHVFDATDKVIMYLKERGSWLETSTYTHSYPHCWRTDTPLI 426

Query: 103 HD----TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +         + K       + KG      ++RD  +    E  +            PV 
Sbjct: 427 YRAMPSWYIEVTKLKERMMQLNKGVNWIPDNVRDGQFGKWLEGIRDWSISRNRFWGAPVP 486

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD-----LSLSRKT 213
             + +   +                 + +LP  R  E        L       L      
Sbjct: 487 VWKSDDPKYPR--------IDVYGSIKKVLPNVRALEEDFGPIDDLHRPYIDDLVRPNPD 538

Query: 214 FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGKDILRFH 271
              G  +      ++  W ++ +       Y         + +PAD     I +    F+
Sbjct: 539 DPSGKSMMRRVPDVLDCWFESGSMPFAQVHYPFENKELFEENFPADFITEYIAQTRGWFY 598

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
            ++  +  +    P    +     +  +G+K+SK L N +DP+EV E  G D+LR+ L+ 
Sbjct: 599 TLFVLSTGIFDKHPFESCICHGVILDIQGQKLSKRLNNYLDPMEVFERFGADSLRFMLLS 658

Query: 332 EIACG-KDGFYDKDGLKKRVN-ADLANGIGNLVSRSVSMILKD---YDGMIPTPGAFTES 386
                  D   D+DG   R    ++   I N  S        D      +    G     
Sbjct: 659 SSVSTGGDLLLDQDGQVIRDVLKNVVKPIWNSYSFFTVYANADKIRARVLDSLDGLNNIM 718

Query: 387 DESILSVCSRVLQEIRENMQN------QLIHRALAQVISLVSEVDRYFDAQ---KPWELK 437
           D+ IL  C  ++Q +   M++        I  A   ++    +++ ++  +   + W  +
Sbjct: 719 DKYILHECMHLVQSVLSAMESIEGHDPYDIKLACTAIVQFSDKLNNWYIRRCRERFWATE 778

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           KT              V+   + ++  F+P ++  I+
Sbjct: 779 KT--QDKFDAYNTLYTVLYYFSRVIAPFLPFISEAIW 813



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 26/164 (15%)

Query: 1   MKEREK---LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK 57
           ++ + K           + N  PH GH     I D +AR+  + G  V    G D HG  
Sbjct: 34  VENKPKTRRFVFYDGPPFANGLPHYGHLLTGFIKDAVARYKSMRGFRVDRRFGWDCHGLP 93

Query: 58  IAKAAQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +   ++                         +   F  +        A  +D  +D+  +
Sbjct: 94  VEMLSEKELNVSGRTKIEEFGIEKFNANCRNSIMRFTQKWKEYVTRQARWVD--FDNGYK 151

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           T +K   ++    + K+ D+G +Y+      YS   +   ++ E
Sbjct: 152 TMDKDFMESVMWAFYKLWDRGLVYESLRVVPYSWACQTPLSNFE 195


>gi|58581249|ref|YP_200265.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623169|ref|YP_450541.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|81311913|sp|Q5H2E1|SYI_XANOR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123739148|sp|Q2P5B0|SYI_XANOM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58425843|gb|AAW74880.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367109|dbj|BAE68267.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 943

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALEDMVLLDRWIVHRAHELQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A++++  L      N  F +    L P
Sbjct: 777 RWIAPVMSFTADELWGYLPGKHVGNVLFATWYGGLAP 813



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKCLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAEFRQKCREYATEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|254251624|ref|ZP_04944942.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894233|gb|EAY68113.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 945

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAQHALPAGEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ-LAI 460
           + +    H  +A++ +  SE     Y D  K          RA       +  + Q L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTQGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 69.8 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 12/181 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + +  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKAGFKRLGVLGDWANPYKTMNFVNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             KI +KG +Y+G     +     +   + EV              P    E+  + F L
Sbjct: 174 LGKILEKGYVYRGLKPVNWCFDCGSALAEAEVEYKDRTDPTIDVMFPFAEPEKTAHAFGL 233

Query: 170 S 170
           S
Sbjct: 234 S 234


>gi|23264046|gb|AAL85500.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens]
          Length = 1030

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 136/413 (32%), Gaps = 65/413 (15%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            +     +  +     NP+ +   E +F R SA +++L+    +     +P   +     
Sbjct: 378 KQEQIEHNYPHCWRCDNPLIYRAVESWFIRASALREQLVEN--NSQVNWVPEHVKEGRFG 435

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQ------------------------------- 225
                 +D ++SR  F WG  I +    Q                               
Sbjct: 436 DWIRNARDWAVSRNRF-WGAPIPVWRCDQCGTVEVMGSIAQIEARSGRKVEDLHVPHIDE 494

Query: 226 ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI--GKDI 267
                            +   W ++      +  Y         + +PAD  V    +  
Sbjct: 495 HRFACQCCEGTMSRVTGVFDCWFESGAMPFASRHYPFENKQEFEQTFPADFIVEYLAQTR 554

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   +       P    +     +   G K+SK L N  +P+++++  G DALR 
Sbjct: 555 GWFYTMMVISTGCFEQNPFKNAMCHGVILAKDGRKMSKRLKNYPNPMDLMQTHGSDALRV 614

Query: 328 FLVREIACG-KDGFYDKD---GLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGA 382
            L+    C  +D  + ++    + +R +    N +    + + +       D   P    
Sbjct: 615 ALLASPVCKGEDIKFSEESVRDVVRRYHLLFWNCLQFYKTFTEIDQFSPSGDLGQPLDNV 674

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD-RYFDAQKPWELKKTNP 441
               D  +L   + +  +I+  M++    +  +++   ++ +   Y    K    +    
Sbjct: 675 L---DHYLLHELAALESDIKMWMESLDFSKIYSRIEVFINVLSTWYLRLNKARIWRDGLD 731

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQR 492
           D       V    +   A LL  F+P LA  ++  L  AD    + + S+D++
Sbjct: 732 DDKRQCYEVLHYALSNFARLLAPFMPFLAEAVYTELGYADSVHLQDWPSIDRQ 784



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +          +    PH GH     I DV+ R+  + G  V    G D HG  +   
Sbjct: 36  EGKPVYVFYDGPPFATGLPHYGHILTSYIKDVIPRYQTMLGKQVPRRWGWDCHGLPVEFE 95

Query: 62  AQNAG-----------------VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A                     +  V + + ++R   + +   + +D   +T +  +
Sbjct: 96  VEKAMGFKSKRDILEFGVEQFNDECRELVLKYADDWRGFVNRMGRWVDFDGAYKTMDNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++    +K + DKG +Y+      Y +R +   ++ E
Sbjct: 156 MESVLWGFKTLHDKGHVYERGKIVPYCVRCQTVLSNFE 193


>gi|332039644|gb|EGI76046.1| valyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 1000

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/437 (14%), Positives = 126/437 (28%), Gaps = 114/437 (26%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSA----------YQDKLLSYYESHPEFILPIERRNEVI 197
                    V+ M  + +F  +S              K +    S     +P    N   
Sbjct: 373 PICARTGQVVEPMLTDQWFVAMSKVSDKDPAGKSIAQKAIDAVASGEVKFVPENWVNT-Y 431

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIP------------------------------------ 221
           +   + ++D  +SR+   WG +IP                                    
Sbjct: 432 NQWMNNIQDWCISRQ-LWWGHQIPAWYTDGTLIHGERFIVARSEEEARAKAAQAGYTGSL 490

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLD-----NPDGSKAKFWPADLHVIGKDILRFH--AIY 274
                ++  W  +     +T G+ +     +P      + P+ + V G DI+ F    + 
Sbjct: 491 KRDDDVLDTWYSSALVPFSTMGWPEALNDASPTKDYDLYLPSTVLVTGYDIIFFWVARMI 550

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE--------------- 319
                 +  +P             +G+K+SKS GNV+DP+++I+                
Sbjct: 551 MMTTHFTGRVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALAPLLDKRTTGLR 610

Query: 320 ----------------------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
                                  G DALR+      + G+   +D    +     +  N 
Sbjct: 611 KPETAPAVRKNTEKEFPEGIPAYGADALRFTFAALASLGRSINFDSKRCEG--YRNFCNK 668

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSVCSRVLQEIRE 403
           + N  +R V M  +  D  +                   F+ +D  I+S   +V   + +
Sbjct: 669 LWN-ATRFVLMNCEGQDCGLKEHTKEQCQPGGEFAGYMHFSPADRWIVSELQKVETAVAQ 727

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKP---WELKKTNPDRASTVLYVTVEVIRQL 458
                 +      +   V     D Y +  K       +  N  +        +  +  +
Sbjct: 728 GFAEYRLDNVANTIYDFVWNEFCDWYLEIAKVQIQVATQSGNEAQQRATRRTLIRTLETI 787

Query: 459 AILLQAFVPKLANKIFD 475
             L    +P +  +++ 
Sbjct: 788 LRLAHPIIPFITEELWQ 804



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 22/157 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI------ 58
               I           H+GHA+   I D L R+HR+ G + L+  GTD  G         
Sbjct: 51  PSFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGHNTLWVPGTDHAGIATQIVVER 110

Query: 59  ---AKAAQNAGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEKRHHD 104
               +      +  K FV +                R M D +D  ++ F  T +++   
Sbjct: 111 QLQEQKVSRHDLGRKNFVAKVWEWKEKSGNTITTQMRRMGDSVDWDHEYF--TMDEKLST 168

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
                + ++ ++G IY+G     +    ++  +D EV
Sbjct: 169 VVTETFVRLYEQGLIYRGKRLVNWDPVLQSAVSDLEV 205


>gi|290580940|ref|YP_003485332.1| isoleucine-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997839|dbj|BAH88440.1| isoleucine-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 930

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSS------WNGVLNTREDLGYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G + LR ++        D
Sbjct: 572 AVNGHAPYKSVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWVASVDT-DSD 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +      +              D+ +L   ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTTDF---NPYINKIAFEDLRSVDKYMLIKFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVE 453
           ++  I     +         V++   V     Y D  K     +   D A   +  V  E
Sbjct: 688 LVAVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++  +  LL   +P  + +I+  L   +E
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEE 776



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  NKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L +S D      T   ++      
Sbjct: 106 AKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWENPYITLVPKYEAAQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  ++DKG IY G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANRV 214


>gi|224065505|ref|XP_002189693.1| PREDICTED: isoleucyl-tRNA synthetase [Taeniopygia guttata]
          Length = 1262

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/447 (14%), Positives = 137/447 (30%), Gaps = 27/447 (6%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G   A+ A  AG   K       R  ++   ++         TT +  +  C 
Sbjct: 349 VCPVDASGCFTAEVADFAGQYVKDADKHIIRWLKEKGRLI-------HSTTFQHSYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +           + Y+  D V +   G +     +       
Sbjct: 402 RSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNR 461

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                      + L           L      +V    +  +  LS+  +     ++   
Sbjct: 462 YWGTPIPLWVSEDLEEVVCVGSVAELEELSGVKVTDLHRENIDQLSIPSRRGKGALRRVP 521

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           +   +   W ++ +       Y           +PAD    G D     F+ +   +  L
Sbjct: 522 E---VFDCWFESGSMPYAQVHYPFQNRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP+ ++   G DALR +L+       ++ 
Sbjct: 579 FGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMHIVNSYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYD-----GMIPTPGAFTESDESIL 391
            + ++G++  +        N    LV     +  KD              +    D+ IL
Sbjct: 639 RFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWIL 698

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYV 450
           S    ++Q  +  M    ++  + +++  V    + Y    +     +   +     L  
Sbjct: 699 SFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALET 758

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
              V+  +  L+  + P +   ++  L
Sbjct: 759 LFSVLFSMCRLMAPYTPFITELMYQNL 785



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 36  KNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---------TTEKRH 102
                        A +    +  +        A   + S     R         T     
Sbjct: 96  IDKTLGIKGPEDVAKMGIAAYNKECRGIVMRYAKEWEFSVTRLGRWIDFENDYKTLYPEF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|323489509|ref|ZP_08094736.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396640|gb|EGA89459.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 920

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/476 (14%), Positives = 152/476 (31%), Gaps = 41/476 (8%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI------- 89
           F       +      DE G   A+A    G     F D+ +++  +  D +         
Sbjct: 333 FLIGKKYGLDVLCPVDERGVMTAEAPGFEG----EFYDKANKSITEALDKVGALEKLTFI 388

Query: 90  --SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG---CYSGWYSLRDEAYYNDDEVYKG 144
             SY    RT +   +      +  I    D         S   +  +   +N       
Sbjct: 389 THSYPHDWRTKKPVIYRATAQWFVSIEAFRDQILNAIKETSFTPAWGETRLFNMLRDRGD 448

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            +         P+     E     ++      ++               N         L
Sbjct: 449 WNISRQRVWGVPIPVFYAENGDPVITEETIAHIAKLFRENG-------SNVWFERSTDEL 501

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
                +  +   G+        IM VW D+ +++             +   +PADL++ G
Sbjct: 502 LPPGFTHPSSPNGV--FTKEMDIMDVWFDSGSSHQGVLDER------EDLQYPADLYLEG 553

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     F++    +  ++ + P    +     +   G K+SKSLGNVI P +V+ ++G 
Sbjct: 554 SDQYRGWFNSSLTTSVAINGHAPYKGILSHGFTLDGNGRKMSKSLGNVIVPSKVMNQMGA 613

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-PTPG 381
           D LR ++   +    D     +  K+   +++   I N +      +    +        
Sbjct: 614 DILRLWVA-SVDYTADVRVSDENFKQV--SEVYRKIRNTLKFLHGNLADFNEQEHRVAFE 670

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT 439
              E D+ +     ++++ +R+  +          + +         Y D  K     ++
Sbjct: 671 DMREMDQYMAMKLQKMVETVRKGYETYEFSTIYHALNNYCANDLSSFYLDVAKDVVYIES 730

Query: 440 -NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRL 493
            +      +  V  + +  +  L    +P  A++++  L FV +E+       + +
Sbjct: 731 ADHPHRRAMQTVMFDSLMAILKLAAPIIPHTADELWSYLSFVEEESVQLTDFPEAV 786



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 15/168 (8%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
              ++      Y N   H+GHA   ++ D++ R   + G    +  G D HG  I +A  
Sbjct: 47  RPFFVLHDGPPYANGDLHMGHALNKVLKDMIVRSRSMMGFHAPYVPGWDTHGLPIEQALT 106

Query: 64  NAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
           N GV  K             +  Q   N R     + +  D      T +  +      +
Sbjct: 107 NKGVNRKEMSLAEFRKLCEEYAFQQIDNQRSQFKRIGVRGDWENPYVTLKPAYEARQIEV 166

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           + K+++KG IYKG    ++S   E+   + E+              PV
Sbjct: 167 FGKMANKGYIYKGLKPVYWSPSSESSLAEAEIEYHDKKSPSIYVSFPV 214


>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 922

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 103/264 (39%), Gaps = 18/264 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PADL++ G D     F++    + 
Sbjct: 517 FTKENDIMDVWFDSGSSHQGVLV-------ERGMKYPADLYLEGSDQHRGWFNSSLITSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGNVI P +V+++ G D LR ++   +    D
Sbjct: 570 AINGYAPYKGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMDQYGADILRLWVA-SVDYTAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D LK+   +++   I N   R +   + D+D      +     E D+ +      
Sbjct: 629 VRISMDMLKQV--SEVYRKIRNTF-RFLHGNIADFDPKKDRVSYAELREMDQYVYMRLQD 685

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE- 453
           VL+ +R              V + V+      Y D  K     + + ++    +   +  
Sbjct: 686 VLKTVRAAYDRYDFAAVYHVVNNFVAVELSSFYLDIAKDVVYIEGHDNKDRRAMQTVIYD 745

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L  ++   +P   ++++  L
Sbjct: 746 TLMTLVKIMTPIIPHTTDEMWSYL 769



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   ++ D++ R   + G  V +  G D HG  I +A
Sbjct: 46  EGRPEFVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIEQA 105

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
             N GV  K             +  +   N R     L I  D      T +        
Sbjct: 106 LTNKGVKRKEMSVAAFRQLCEEYAYEQIDNQRTQFRRLGIRGDWENPYITLKPEFEARQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 166 EVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|217963834|ref|YP_002349512.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782418|sp|B8DBR2|SYI_LISMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217333104|gb|ACK38898.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571595|emb|CAR84774.1| ileS [Listeria monocytogenes L99]
          Length = 921

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 109/282 (38%), Gaps = 24/282 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT  A       E D+ ++  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFHPTTNAVSYENLREVDKYMMIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             E +  L  LL   +P    ++++ L     E+   Q L +
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPE 784



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  GRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|71911056|ref|YP_282606.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71853838|gb|AAZ51861.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 933

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNTKENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGTVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +++ ++  LL   +P    +I+  L    E
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYLEYESE 776



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|73972290|ref|XP_538837.2| PREDICTED: similar to Valyl-tRNA synthetase 2 (Valine--tRNA ligase 2)
            (ValRS 2) (G7a protein) isoform 1 [Canis familiaris]
          Length = 1256

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 120/404 (29%), Gaps = 57/404 (14%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                ++    N   W      ++        +     + P    P ER            
Sbjct: 705  HQRTWHTWMDNIRDWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDERYWVSGRSKAEAR 764

Query: 205  KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
            +  +         I +  D   ++  W  +     +  G+ +  +   + F+P  L   G
Sbjct: 765  EKAAKEFGVSSDKISLQQDED-VLDTWFSSGLFPFSIFGWPNQSE-DLSVFYPGTLLETG 822

Query: 265  KDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE---- 318
             DIL F    +      L+  LP  +           G K+SKSLGNVIDP++VI     
Sbjct: 823  HDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSL 882

Query: 319  ---------------------------------EVGVDALRYFLVREIACGKDGFYDKDG 345
                                             E G DALR+ L    + G+D   D + 
Sbjct: 883  QGLHDQLLNSNLDPSEVEKAKDGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNR 942

Query: 346  LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
            +         N + N    ++  + K +     +   G  +  D  I S  +  ++   +
Sbjct: 943  ILG--YRHFCNKLWNATKFALRGLGKGFVPSATSEPGGHESLVDRWIRSRLTEAVRLSNQ 1000

Query: 404  NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
              Q            S       D Y +  KP  L   +   A          +     L
Sbjct: 1001 GFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGMDHVVAECARQTLYTCLDVGLRL 1059

Query: 462  LQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            L  F+P +  ++F  L      R  Q+      P   +    +P
Sbjct: 1060 LSPFMPFVTEELFQRLP----RRTLQA-----PPSLCVTPYPEP 1094



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  VTTK-----------------VFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
              +                  + ++           L  S D + R   T + +     
Sbjct: 397 WREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 455

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 TEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|327398468|ref|YP_004339337.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181097|gb|AEA33278.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 930

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 106/290 (36%), Gaps = 19/290 (6%)

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            T   G    +    I+ VW D+  ++             +   WPA +++ G D     
Sbjct: 519 YTCQCGSSEFEKENDILDVWFDSGVSHAAVLERR------EELSWPASMYLEGSDQHRGW 572

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           FH+    +       P  + +     +  KG K+SKSLGNVI P ++I++ G + LR + 
Sbjct: 573 FHSSLLESVGTRDRAPYDEVLTHGFVVDSKGRKMSKSLGNVIQPEKIIKKYGAELLRLW- 631

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                  +D     +    R   D    I N +   +  +    +          E D+ 
Sbjct: 632 ASATDYREDVRLSDE--IMRRLVDNYRKIRNTIRFLLGNLNDFDESKALKYDELEEIDKW 689

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWEL--KKTNPDRAS 445
           +L+    + +++ +  ++   H     +    ++   + Y D  K       K +  R S
Sbjct: 690 VLAETEHLKEKLLKAYEDYEYHVIYRNMANYCILVLSNFYLDVLKDRLYCEAKDSKKRLS 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                  E+++ +   +   +   A + +  +  A  +     +++ +KP
Sbjct: 750 A-QTAMDEILKVIVFYMAPILSFTAEEAYSYMNGAKPSV---HMEEFVKP 795



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 16/161 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GH    ++ D++ +   + G    +  G D HG  I   
Sbjct: 45  KSRPSFILHDGPPYANGHIHMGHVLNKVLKDIVVKSKTMMGYYSPYVPGWDCHGLPIEHN 104

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
            +      K               +  +     R+    L +   +D+   T + ++   
Sbjct: 105 IEKEIGKNKKNSMPKSEFRRMCRDYAKKYIDIQREEFKRLGVFGDWDNPYLTMDFKYEAD 164

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                 K  +KG +YK     ++    +      EV    D
Sbjct: 165 TLRELGKFVEKGLVYKEKKPVYWCYSCKTALALAEVEYQDD 205


>gi|320546329|ref|ZP_08040648.1| isoleucine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449050|gb|EFW89774.1| isoleucine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 932

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNAREDLEYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D LK+             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILKQTSET------YRKIRNTLRFLIANTTDFNPNTDAVAYEDLRSVDKYMTVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYV 450
            ++++  IR+  ++         V++   V     Y D  K     +   +     +  V
Sbjct: 685 FNQLVATIRKAYEDYDFMTIYKAVVNFITVDLSAFYLDFAKDVVYIEAADNIARRQMQTV 744

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FYDILVKITKLLTPILPHTAEEIWSYLEFEPEE 777



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFNLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEIPLTEYLAMCREYALSQVDKQREDFKRLGVSADWENPYVTLIPAYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|313649713|gb|EFS14137.1| leucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 811

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 6/184 (3%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH     I DV+AR+ R+ G +VL   G D  G     AA         +   N    +
Sbjct: 1   MGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMK 60

Query: 82  DMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           +   +L   YD    + T    ++   +  + ++  KG +YK   +  +   D+    ++
Sbjct: 61  NQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANE 120

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           +V  G            V+  E   +F +++AY D+LL+  +    +   ++        
Sbjct: 121 QVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIG 176

Query: 200 VKSG 203
              G
Sbjct: 177 RSEG 180



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 454 YTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 513

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 514 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 573

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 574 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 627

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 628 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 687

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E ++ +  +L  F P +   ++  L      +
Sbjct: 688 -----AKAP-----TDGEQDRALMQ---EALQAVVRMLNPFTPHICFTLWQELKGEGDID 734

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 735 NAPWPVADEK 744


>gi|312372945|gb|EFR20792.1| hypothetical protein AND_19441 [Anopheles darlingi]
          Length = 1803

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 13/266 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 531 VFDCWFESGSMPFAQNHYPFENPTEFMNNFPADFIAEGIDQTRGWFYTLLVISTALFNKA 590

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P      +   +   G+K+SK   N  DP+EV+ + G DALR +L+       ++  + +
Sbjct: 591 PFKNLNVTGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINSPVVRAENLRFKE 650

Query: 344 DGLKKRVNADLA---NGIGNLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVC 394
           +G++  +        N    L         +D       P   TE       D  I+S  
Sbjct: 651 EGVRDIIKDVFLPWFNAFRFLFQNVDRFAKEDGVVYRYDPVRHTEKRSTNVMDVWIISFK 710

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M+   ++  + ++   + ++ + Y    +     +   +     L    +
Sbjct: 711 ESLLKFVSEEMKAYRLYTVVPRLTRFIDQLTNWYVRMNRKRIKGENGVEDCYHALDTLYD 770

Query: 454 VIRQLAILLQAFVPKLANKIFDILFV 479
           V+  +  ++  F P L   +F  L +
Sbjct: 771 VLLAMVKMMAPFTPYLTEFMFQRLRM 796



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + +        +    PH GH     + D++ R+    G  V    G D HG  +   
Sbjct: 43  KGKPRYTFYDGPPFATGLPHYGHILAGTVKDIVTRYAHQQGYHVERRFGWDCHGLPVEYE 102

Query: 62  AQN--AGVTTKV-------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                     +                    + ++  +    M   +D   D   +T   
Sbjct: 103 IDKTLNIRGPEDVAKMGIKAYNNECRKIVMRYANEWEQIIGRMGRWIDFKNDY--KTLYP 160

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            + ++   ++K++  KG +Y+G     YS       ++ E
Sbjct: 161 WYMESIWWVFKQLYVKGMVYQGVKVMPYSTACTTALSNFE 200


>gi|309785927|ref|ZP_07680556.1| leucyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308926038|gb|EFP71516.1| leucyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 811

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 6/184 (3%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH     I DV+AR+ R+ G +VL   G D  G     AA         +   N    +
Sbjct: 1   MGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMK 60

Query: 82  DMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           +   +L   YD    + T    ++   +  + ++  KG +YK   +  +   D+    ++
Sbjct: 61  NQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANE 120

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           +V  G            V+  E   +F +++AY D+LL+  +    +   ++        
Sbjct: 121 QVIDG----CCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIG 176

Query: 200 VKSG 203
              G
Sbjct: 177 RSEG 180



 Score = 89.8 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 74/310 (23%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWP--------AFLLSANLP--- 285
           Y          D   A +W P D+++ G +    H +Y+         A +++++ P   
Sbjct: 454 YTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQ 513

Query: 286 ----------------------LPKKVFSHGFILHKGE------------------KISK 305
                                     V +      KG                   K+SK
Sbjct: 514 LLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSK 573

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S  N IDP  ++E  G D +R F++          + + G++       AN     V + 
Sbjct: 574 SKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEG------ANRFLKRVWKL 627

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL-IHRALAQVISLVSEV 424
           V       D       A TE  +++     + + ++ +++  +   + A+A ++ L++++
Sbjct: 628 VYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKL 687

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--E 482
                A+ P     T+ ++   ++    E +  +  +L  F P +   ++  L      +
Sbjct: 688 -----AKAP-----TDGEQDRALMQ---EALLAVVRMLNPFTPHICFTLWQELKGEGDID 734

Query: 483 NRCFQSLDQR 492
           N  +   D++
Sbjct: 735 NAPWPVADEK 744


>gi|284990117|ref|YP_003408671.1| aminoacyl-tRNA synthetase class Ia [Geodermatophilus obscurus DSM
           43160]
 gi|284063362|gb|ADB74300.1| aminoacyl-tRNA synthetase class Ia [Geodermatophilus obscurus DSM
           43160]
          Length = 861

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/353 (18%), Positives = 119/353 (33%), Gaps = 20/353 (5%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE----SHPEF 186
           RD       E+    +   Y  + N V+ +  +    R   +      +Y       P++
Sbjct: 417 RDALVARGREIRWVPEHMRYRYE-NWVEGLNGDWLISRQRFFGVPFPVWYRLDSSGDPDW 475

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             PI    E +    S       S            DP  +M  W  +  +    +G+  
Sbjct: 476 SSPILAPEEALPVDPSSDVPPGFSEDQRGEPGGFTADPD-VMDTWATSSLSPQVASGWDT 534

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           +P+   A  +P D      DI+     +    +      +P      S   +    +K+S
Sbjct: 535 DPE-LFAHVFPMDQRPQAHDIIRTWLFSTVVRSHFEHGTVPWTHATISGFVVDPDRKKMS 593

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV+ PI+V+E  G DA+R+        G D  +D+  +K  V   LA  I N+   
Sbjct: 594 KSKGNVVTPIDVLERYGTDAVRWR-AAGARPGADSPFDEAQMK--VGRRLAIKILNVGKF 650

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA--QVISLVS 422
            + +        +         D  +L+  + V+ E    M+     RAL   +     S
Sbjct: 651 VLGL---GASADLSASAVTEPVDRGLLAGLAGVVDEATAAMETYNYTRALELSEAF-FWS 706

Query: 423 EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             D Y +  K       +   A +        +     L    +P +  +++ 
Sbjct: 707 FCDDYVELVKSRAY--GSGPAAESARATLALALSVQLRLFAPVLPFVTEEVWS 757



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 35/156 (22%)

Query: 9   ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ----- 63
           I T     +   H+GH +     D++AR+ R+ G  V +  G D++G    +  Q     
Sbjct: 60  IDTPPPTASGSLHVGHVFSYTHTDIVARYQRMRGKHVYYPMGWDDNGLPTERRVQNYYGV 119

Query: 64  ---------NAGVTTKV-------------------FVDQNSRNFRDMADVLDISYD--D 93
                                                 +++ R F  +   + +S D  +
Sbjct: 120 RCDPSLPYDEGFEPPAKPGKDQQPVSRRNFVELCMRLTEEDERAFEQLWRRVGLSVDWNN 179

Query: 94  FIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
             RT  +    T +  +     +G+ Y       + 
Sbjct: 180 VYRTISEASRATAQRAFLHNLARGEAYAQEAPTLWD 215


>gi|89898140|ref|YP_515250.1| valyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722316|sp|Q255D3|SYV_CHLFF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|89331512|dbj|BAE81105.1| valyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 940

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 83/392 (21%), Positives = 130/392 (33%), Gaps = 80/392 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  + +++D L  +  S    I P E     +S+V   L+D  +SR+   W
Sbjct: 355 IEPYLSKQWFVSVDSFRDSLREFVASDSIKIFPPEFTRNYLSWVN-NLRDWCISRQ-LWW 412

Query: 217 GIKIP------------------------DDPQ------YIMYVWIDALTNYLTTTGYLD 246
           G +IP                         DP        ++  W  +    LT  G+ D
Sbjct: 413 GHRIPVWYHKSDEDRIICYDGEGLPEEVAQDPDSWDQDPDVLDTWFSSGLWPLTCLGWPD 472

Query: 247 NPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFI-------- 296
                  KF+P  + + G DIL F           +    P    VF HG I        
Sbjct: 473 VEAKDLKKFYPTSVLITGHDILFFWVTRMVLLCSAMVGEKPFSD-VFLHGLIFGKSYKRY 531

Query: 297 ---------------------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
                                        K EK+SKS GNVIDP+E+I++ G DA+R  L
Sbjct: 532 NNLGEWTYISGEEKHAYDMGKPLPKDVTAKWEKLSKSKGNVIDPLEMIDKYGADAVRMAL 591

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT---PGAFTES 386
                 G+    D    ++  N   AN I N        I       +            
Sbjct: 592 CSCANRGEQIDLDYRLFEEYKN--FANKIWNGARFIFGHISNLTGKDLADGINQNLLGLE 649

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT--NPD 442
           D  IL   +R+L+E+    Q+    R                Y +  KP    K   + D
Sbjct: 650 DYYILDGFNRLLKELESAYQSYAFDRVTTMAYEFFRNDFCSTYIEIIKPTLYGKQGNDED 709

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           R  T   +   ++  +  +L    P +   +F
Sbjct: 710 RL-TKQKLLAVLLVNILGVLHPIAPFVTETLF 740



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 24/183 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           H+GHA    + DVL R+ R+ G +V +  GTD  G      
Sbjct: 35  SNKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNAGVT-------------TKVFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +    +                +V +             R +    D S   F  T E 
Sbjct: 95  VERHLYSSLGKRRIDFSREEFLEYVWEWKEKSEGIILSQLRQLGCSCDWSRLRF--TMEP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
                 +  +K + D+G IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 LASRAVKKAFKVLFDRGHIYRGYYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRVVDS 212

Query: 160 MEE 162
            +E
Sbjct: 213 SDE 215


>gi|146292162|ref|YP_001182586.1| isoleucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166229770|sp|A4Y4A4|SYI_SHEPC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145563852|gb|ABP74787.1| Isoleucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 940

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 130/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   +R     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVANRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEADQYRKVTDTLDVWYDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFDPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E       H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYDQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALFHIAEAMVRWIAPVLSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKITAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVSMVIWTTTPWTLPANR 251


>gi|171185908|ref|YP_001794827.1| valyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935120|gb|ACB40381.1| aminoacyl-tRNA synthetase class Ia [Thermoproteus neutrophilus
           V24Sta]
          Length = 799

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 113/291 (38%), Gaps = 22/291 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W D+  +++  +G   + +    + +P   L   G DI+R    Y    A+LL  +
Sbjct: 456 VLDTWFDSSISWMYASGATKDFNV-FPRAYPHSILRPQGYDIIRTWLYYALLRAYLLFGD 514

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +P      +   +  KGE + KS GNVID +  +E+ G D +R++       G D  Y++
Sbjct: 515 VPFRHVRINGMGLDEKGEAMHKSKGNVIDLLLPVEKYGADPVRFWAAAAGRLGSDYRYNE 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +  R   +    + N+    +S           +  A T  D+++L+    V +    
Sbjct: 575 NMI--REGKEFVTKVWNISRFVLSF------PEPQSKPALTPVDKAVLARLYGVAKRAIS 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQL 458
                 ++     + + +     D Y +  K     +      D     ++    V++  
Sbjct: 627 AYSEFDVYEPAHALYNFIWHEFADHYIELVKSRAYNRDGSYTRDEQDAAVWTLYTVLKYS 686

Query: 459 AILLQAFVPKLANKIF-DILFVADENRCFQSLDQRLKPG----FMLHKTFD 504
             LL   +P + +KI+ +    +  +   +   +  K G    F L K  D
Sbjct: 687 LKLLAPIMPFVTDKIWREAFGRSIHDERLEDPPEEWKEGDEKLFELIKKID 737



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 15/141 (10%)

Query: 7   LYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
             I T   Y  + +PHIG        D++ARF R+ G+DV+F    D +G  I    +  
Sbjct: 38  FVIDTPPPYLSSNRPHIGQTASYAHFDMIARFLRMRGVDVVFPFYLDRNGLPIEVQVEKK 97

Query: 66  -------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCRILWK 111
                            K  +D+    F        +S+D + + T    +    +  + 
Sbjct: 98  YNIVAHEVPREKFLQLCKEELDKYEGEFVATLRRWGLSFDYWPQGTDSPEYRRMTQKTFV 157

Query: 112 KISDKGDIYKGCYSGWYSLRD 132
           ++  KG IY+      +  R 
Sbjct: 158 ELWRKGLIYEAERPTPWCPRC 178


>gi|19746464|ref|NP_607600.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632618|sp|Q8P068|SYI_STRP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19748668|gb|AAL98099.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 933

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +++ ++  LL   +P    +I+  L    E
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYLEYESE 776



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|194468388|ref|ZP_03074374.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453241|gb|EDX42139.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 950

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 107/279 (38%), Gaps = 23/279 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PA+L++ G D     F++    + 
Sbjct: 538 FTKETDIMDVWFDSGSSHQGVLAER------DYLTYPANLYLEGSDQYRGWFNSSLITSV 591

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           + S + P  + V     +  +G K+SKS GNVIDP +V++++G + +R +++       D
Sbjct: 592 VCSGHAPYKEIVSQGFTLDKRGNKMSKSQGNVIDPNKVVQQMGAEIIRLWVMSADTSA-D 650

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                   ++   A         +  +   +L +     P             D+ +L  
Sbjct: 651 VRVSMGTFQQISEA------YRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVK 704

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +  L+ +RE+  N     A   +I+ V       Y +  K    ++  N +   ++  V
Sbjct: 705 LNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTV 764

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             +++  L  LL   +P    +++  +   ++      +
Sbjct: 765 FYDILLTLVKLLTPILPHTTEEVWSYMNEPEDFVQLTEI 803



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 64  EGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQ 123

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +G   K             +  +     R     L +S  +D    T +K       
Sbjct: 124 LTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQI 183

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ + + KG +Y+     ++S   E+   + EV   
Sbjct: 184 RVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 220


>gi|94994746|ref|YP_602844.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548254|gb|ABF38300.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 933

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 106/272 (38%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                + L +   ++    I N + R +     D++ +  T         D+ +  V ++
Sbjct: 631 VRVSMEILGQV--SETYRKIRNTL-RFLIANTSDFNPVTDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +++ ++  LL   +P    +I+  L    E
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYLEYESE 776



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        R+    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRNDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|303236864|ref|ZP_07323443.1| leucine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483032|gb|EFL46048.1| leucine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 949

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  KNKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  D+N   +R+  D +  S+D    IRT + +++   +  ++++ +   
Sbjct: 88  YAIQTGQHPAITTDKNIARYREQLDKIGFSFDWEREIRTCDPKYYHWTQWAFQRMFESYY 147



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 72/178 (40%), Gaps = 37/178 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++E+ G D LR + +          +D +G+         +G   
Sbjct: 726 EKMSKSMFNVVNPDVIVEQYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCFR 776

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  ++ +   P+  +        L    ++++++  +++    + A++  +  
Sbjct: 777 FLKKFWKLYQQELNDNEPSKES--------LKSVHKLIKKVSYDIEQFSYNTAISAFMIC 828

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+E                              ++R L I +  F P +A ++++++ 
Sbjct: 829 VNE--------------------LGQQKCNNRGLLRSLLITIAPFAPHIAEELWEVIG 866


>gi|328773785|gb|EGF83822.1| hypothetical protein BATDEDRAFT_84552 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1075

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 105/283 (37%), Gaps = 14/283 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   A  L    
Sbjct: 528 VFDCWFESGSMPYAQQHYPFENKEKFEASFPADFIAEGIDQTRGWFYTLTVLAAHLFDKP 587

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
                + +   +   G+K+SK L N  DP++V+   G D LR +L+   A   +   + +
Sbjct: 588 AFKNVIVNGLILASDGKKMSKRLKNYPDPMDVLNSYGADVLRLYLITSPAVRAESSRFRE 647

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMIL----KDYDGMIPTPGAFTE----SDESILSVCS 395
           +G+K  ++  +             + L     ++D +  +    ++     D  IL+   
Sbjct: 648 EGVKDMISKVMLPWYNAYRFFFAQLALLKKEHNFDFVYNSHLDLSKDQNIMDIWILASTQ 707

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEV 454
            ++  +++ M    ++    +++ L+    + Y    +     +     A   L V  EV
Sbjct: 708 SLIAFVKQEMTAYRLYTVTPRLLKLIDTLTNWYVRFNRKRLKGENGVADAERALNVLFEV 767

Query: 455 IRQLAILLQAFVPKLANKIFDILF--VADENRCFQSLDQRLKP 495
           +  L  L+ AF P L   ++  L   + +     +S+   L P
Sbjct: 768 LFTLCRLMAAFAPFLTETMYQNLKTCIPETKEDTRSVHFLLYP 810



 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 7/153 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R          +   +PH GH     I DV+ RF  L+G  V    G D HG  +   
Sbjct: 39  EGRPPFSFYDGPPFATGRPHYGHLLAGTIKDVVTRFAHLNGHYVERRFGWDTHGLPVEYE 98

Query: 62  AQN--AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
                               +      + ++Y D   TT  R      I +K      +I
Sbjct: 99  IDKKLNIKGPADVAAMGIAKYNAECRAIVMTYADEWETTVTRMGRW--IDFKNDYKTLNI 156

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
                  W     +  ++  +VY+G     Y+ 
Sbjct: 157 SFMESVWWVF---KQLFDKGQVYRGFKIMPYSM 186


>gi|321459211|gb|EFX70267.1| hypothetical protein DAPPUDRAFT_328232 [Daphnia pulex]
          Length = 989

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 69/540 (12%), Positives = 159/540 (29%), Gaps = 100/540 (18%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFT------------TGTDEHGQKIAKAAQNAGV 67
           E I+ D+         R+ +  G  V+                  E G    K       
Sbjct: 264 ETILGDMAIAVNPEDVRYSKYIGRSVIHPIRHDKLPIIADSMVDQEFGTGAVKVTPAHDQ 323

Query: 68  TTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----HHDTCRILWKKISDKGDIYKGC 123
                  ++      + D   I+  +      +       +    + + + D   +    
Sbjct: 324 KDYEIAVRHGIEMLSIFDNQGIANKN----CSEFSGLPRFELREKMIQFLRDNNLLNSIL 379

Query: 124 YSGWYSLRDEAYYNDDEVYKGADGQYYNAQH--NPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                        +  E            +     ++ ++          +++    +  
Sbjct: 380 PHQMSVPLCSRSGDVIEPLLRPQWFVDTQEMAQRAMEAVKSGNLKMHPPHFENVWFEWLG 439

Query: 182 SHPEFILPIERRNEVI---SFVKSGLKDLSLSRKTFDWGIKIPDD----------PQYIM 228
           +  ++ +  +                    ++   F   +++              + ++
Sbjct: 440 NIRDWCISRQLWWGHRVPAYRFAGENDATWIAAHNFQQAVELAKHQNIPFSTVSQDEDVL 499

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPL 286
             W  +     +  G+ +     K   +P +L   G DIL F    +   +  L+  LP 
Sbjct: 500 DTWFSSSLFPFSVCGWPEQTIDLK-NLFPLNLMETGHDILFFWVARMVMMSLELTGELPF 558

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIE------------------EVGVDALRYF 328
            + +        +G K+SKSLGNVIDP++++                    +        
Sbjct: 559 KEVLLHGIICDSQGRKMSKSLGNVIDPLDIVYGSSLKCLEDQLESSLKKGHLSSKEFEKA 618

Query: 329 LVREIACGKDG---------------------FYDKDGLKKRVNADLANGIGNLVSRSVS 367
           +  +     DG                     F + D    + N    N I    +R + 
Sbjct: 619 MTEKRVTFPDGIPQTGSDALRFTLCSYNVKSHFINLDMATLKKNRLFCNKIWQ-ATRFLF 677

Query: 368 MILKDYD--------GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
            IL +           +   P   +  ++ I++   +++ ++   M     H A   + +
Sbjct: 678 QILDETSPQKSSNDIYLRKDPIHSSLMNQWIMNGLDKMVSQVNSAMSRYDFHHATDALYT 737

Query: 420 LV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +  S  D Y +A KP  L   +   ++ VL + ++V       L  F+P L+ +++  L
Sbjct: 738 FLYGSLCDVYLEAIKP--LTGVDKQESAHVLAICLDV---ALRCLAPFMPFLSEELYQRL 792



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 22/189 (11%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +           HIGHA    I D L  ++R++G D  +  G D  G       + 
Sbjct: 63  EKFSMVLPPPNITGTLHIGHALTCAIQDSLVCWNRMNGKDTYWFPGCDHAGIATQAVVEK 122

Query: 65  AGVT----------------TKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTC 106
              +                   +  +           L   +++D  + T + +     
Sbjct: 123 NLKSQNLTREQLGRDKFVEEIWKWKHEKQDIIYQQLKGLGSTLNWDKAVFTMDPKLCYAV 182

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK----GADGQYYNAQHNPVQWMEE 162
              + ++  KG IY+      +S +  +  +D EV      G  G        PV +   
Sbjct: 183 NEAFIRLHQKGKIYRKESLVNWSCQLRSAISDIEVDHQSIDGPQGISVPGYDKPVTFGYI 242

Query: 163 EGYFFRLSA 171
             + ++LS 
Sbjct: 243 YKFDYKLSD 251


>gi|295677443|ref|YP_003605967.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437286|gb|ADG16456.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 945

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   +++ + +  +I  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHARPVKDWLEIDRYAVALSANLQNDILA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  T  D  +  +       +   L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYHIAHGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            ++  F+   A + + +     E
Sbjct: 781 RVMAPFLSFTAEEAWKVFQPNSE 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  KGRTKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKAGFRRLGVLGDWDNPYKTMNFANEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|241759644|ref|ZP_04757745.1| valine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320016|gb|EER56397.1| valine--tRNA ligase [Neisseria flavescens SK114]
          Length = 998

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 69/424 (16%), Positives = 130/424 (30%), Gaps = 66/424 (15%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
             + +     Y    +N   W            +    +  +             NE   
Sbjct: 437 RFIPENWVNTYNQWMNNIQDWCISRQL------WWGHQIPAWYGSNGRTFVARTENEAYK 490

Query: 199 FVKSGLKDLSLSRKTFDWGIK------------IPDDPQYIMYVWIDALTNYLTTTGYLD 246
                L +L          I             I    + ++  W  +     +T G+  
Sbjct: 491 QYIETLPNLRRELSIDKDNITEADIKLVKSKGYILTREEDVLDTWFSSALVPFSTLGWPS 550

Query: 247 NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
             D  KA   P+++ V G +I+ F    +       +  +P            H+G+K+S
Sbjct: 551 ETDELKAFL-PSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMS 609

Query: 305 KSLGNVIDPIEVIEEV-------------------------------------GVDALRY 327
           KS GNVIDP+++I+ +                                     G DALR+
Sbjct: 610 KSEGNVIDPVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRF 669

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTE 385
            +    + G+   +D          +  N + N  +  V M  ++ D       P AFT 
Sbjct: 670 TMASYASLGRSVNFDFKR--AEGYRNFCNKLWN-ATNFVLMNTENQDCGQDEMQPLAFTF 726

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDR 443
           +D+ I+    +    + E  +      A   +   V     D Y +  K  +++   P  
Sbjct: 727 ADQWIIGKLQQAEAAVAEAFETYRFDLAAQTLYEFVWNEYCDWYIELAKV-QIQTGCPTT 785

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
             T     V V+  +  LL   +P +  +++ ++      +   S+     P     K  
Sbjct: 786 QRTTRRTLVRVLETILRLLHPIMPFITEELWQVVAPLANAKTADSIMLAAYPQADKEKIV 845

Query: 504 DPIF 507
              F
Sbjct: 846 QTAF 849



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    I           H+GHA+   I D L R++R+ G +  +  GTD  G       
Sbjct: 31  TKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVV 90

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHD 104
           +                        + + +          +  S D      T +    +
Sbjct: 91  ERQLAAQNVSRHDLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAE 150

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T   ++ ++ ++G IY+G     +        +D EV    +         P+
Sbjct: 151 TVTEVFVRLFEQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPL 203


>gi|50914610|ref|YP_060582.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822719|sp|Q5XB14|SYI_STRP6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50903684|gb|AAT87399.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 933

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 23/272 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
             +++ ++  LL   +P    +I+  L    E
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYLEYESE 776



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 61/172 (35%), Gaps = 20/172 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDIS-----YDDFIR------------TTEKRHHDT 105
              G+  K     N   + +M     +S      DDF R            T + +    
Sbjct: 106 AKQGIKRKEM---NLAEYLEMCRQYALSQVDKQRDDFKRLGVSADWENPYVTLDPQFEAD 162

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
              ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 163 QIRVFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|315122106|ref|YP_004062595.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495508|gb|ADR52107.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 960

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 17/263 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+   +  T              WPA++++ G D     F      + 
Sbjct: 556 WIQSMDILDVWFDSACTHAITLEENP------KLQWPANVYLEGSDQHRGWFQHSLLESC 609

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
               + P    +     +   GEK+SKS GNVI P  +I E G D LR+++V       D
Sbjct: 610 ATRGSTPFTSLITHGFAVDENGEKMSKSKGNVIFPDTIISESGADILRFWVVNSDY-HDD 668

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K+ ++   N D    + N +   + ++  D     P+     E +  IL   + + 
Sbjct: 669 QRLGKNIIQ--TNIDAYRKLRNTIRWMLGVLAHDTGKE-PSLSDVPELERFILHRITELD 725

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV--EV 454
           Q +RE   N      +  +++  +      YFD +K   L   +P     +  + V  ++
Sbjct: 726 QTVREAYDNFDFKTIVRTLMNFSNFELSSFYFDIRKD-SLYCDSPSSLKRLSSIAVIRKL 784

Query: 455 IRQLAILLQAFVPKLANKIFDIL 477
            R L + L   +P  A + +  L
Sbjct: 785 CRSLILWLAPMLPFTAEEAWSCL 807



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 78/237 (32%), Gaps = 27/237 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+K  +     Y N   HIGHA   I+ DV+ R  ++ G D     G D HG  I    
Sbjct: 52  DRKKFVLHDGPPYANGHLHIGHALNKILKDVVVRSFQMRGFDACLVPGWDCHGLPIEWKV 111

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           ++                     + +  +  +   +  + L +   +++   T + +   
Sbjct: 112 ESEYLAQGKNKDIVPVNEFRQECRNYAREWVKIQSEEFERLGVVADFENPYTTMDNKSES 171

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                  K +    IY+G     +S+ ++    + E+             + V     + 
Sbjct: 172 LIASELLKFATTHQIYRGVKPVMWSIAEQTTLAEAEIEYHN-----VDTDSIVVGFSIKS 226

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  Y  +      +   + +P  R     S  + GL  +  S +T  + I+  
Sbjct: 227 ----APDYLREAQIVIWTTTPWTIPGNRAIAFSSHHQYGLYKVLSSDETHTFDIEKN 279


>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 962

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 127/329 (38%), Gaps = 27/329 (8%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           +    R  A+   +  +Y  + + I+  E  N V    +    ++   R+       G  
Sbjct: 489 DWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFRENGSNVWFEREAKDLLPEGFT 548

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++             +    PADL++ G D     F
Sbjct: 549 HPSSPNGEFRKETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSDQYRGWF 602

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    A  ++   P    +     +  +G K+SKS+GN++ P ++++++G D LR ++ 
Sbjct: 603 NSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLGGDILRLWV- 661

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDE 388
             +    D     D LK+   A++   I N   R +   L D++            E D 
Sbjct: 662 SSVDYQSDVRISDDILKQV--AEVYRKIRNTF-RFLLGNLADFNPSQDAVAKAELREVDR 718

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRAS 445
            +L   + ++ +++E  +          + +   +     Y D  K    ++  N     
Sbjct: 719 YMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAANHHDRR 778

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIF 474
            +  V  +V+  L  L+   +P  A++++
Sbjct: 779 AIQTVLYDVLVALTKLVTPILPHTADEVW 807



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   ++ D + R+  + G    +  G D HG  I +A
Sbjct: 86  KGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIEQA 145

Query: 62  AQNAGVTTKVFV------------DQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K                +     R+    L +   +D    T E  +     
Sbjct: 146 LTNKGVKRKEMTVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDRPYITLEPAYEAQQI 205

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG IYKG    ++S   E+   + E+              PV
Sbjct: 206 KVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEIEYNDKKSASIYVAFPV 255


>gi|70606414|ref|YP_255284.1| isoleucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|73920798|sp|P46215|SYI_SULAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68567062|gb|AAY79991.1| isoleucine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 1050

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 16/258 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW D+   +  + G       S+    P DL + G D L   F ++     +L    
Sbjct: 519 VADVWFDSGVAFFASLGQDWRKRWSELG--PVDLVLEGHDQLRGWFFSLLRTGVILMDKA 576

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  +G ++ KS GN ++P +V+ + G D LR +L+R     +D  +   
Sbjct: 577 PYEAVLVHGFMLDEQGREMHKSSGNYVEPSQVVSKYGRDTLRLWLLRNTT-WEDAKFSWK 635

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQE 400
            L      DL       V  +  M L ++     +           D  +LS   R+L+E
Sbjct: 636 SL-DMTRRDLNIIWNVYVFANTYMSLDEFKYSKYSYNDIKDYLKLEDIWLLSRYYRMLKE 694

Query: 401 IRENMQNQLIHRALAQVISL-VSEVDRYF---DAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + E M+   +H    +V +  + ++ R++     ++ W     +PD+ + + YV   V++
Sbjct: 695 VIEAMKEYKVHELANKVTAFIIDDISRFYLRVTRKRAWNEA-NDPDKIA-MYYVLYHVLK 752

Query: 457 QLAILLQAFVPKLANKIF 474
              ILL   +P  A KI+
Sbjct: 753 GSLILLSTVIPFTAEKIY 770



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 57/166 (34%), Gaps = 21/166 (12%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +K        YP++  PHIG  +   I D + R+ RL G  V    G D HG  I  
Sbjct: 33  KNHKKFLFIDGPPYPSSPIPHIGTVWNKTIKDCILRYERLMGYSVKDQPGYDTHGLPIEV 92

Query: 61  AAQNA------------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEK 100
             +                        K F   NS++       L I  D      T   
Sbjct: 93  ETEKRLGIKSKAEIIEKVGVDNFISKCKEFAVNNSKSLTQNFRNLGIFMDWENPYFTFNN 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +      + KK  ++G +YKG +   +  R E    D EV +  D
Sbjct: 153 DYISNSWAVIKKAYERGLLYKGVHVLHWCSRCETTLADYEVSEYRD 198


>gi|282881259|ref|ZP_06289945.1| leucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304849|gb|EFA96923.1| leucine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 949

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D +G    +
Sbjct: 28  KQKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRQQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  +QN +++R+  D +  S+  D  IRT + +++   +  + K+     
Sbjct: 88  YAIQTGQHPAITTEQNIQHYREQLDKIGFSFDWDREIRTCDPKYYHWTQWAFIKMFQSYY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +   +   + +
Sbjct: 148 DNDLQKAQPITKLIQHF 164



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 85/214 (39%), Gaps = 38/214 (17%)

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI  F A  W     +A   L    +  G+ +    K+SKS+ NV++P  ++E+ G D L
Sbjct: 690 DIEAFKA--WRPEYRNAEFILENDKYICGWAIE---KMSKSMYNVVNPDMIVEQYGADTL 744

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFT 384
           R + +          +D +G+         +G    + +   ++ ++  D  +P     T
Sbjct: 745 RLYEMFLGPVEASKPWDTNGI---------DGCHRFLKKLWGLVYENRTDKFLPNDDTPT 795

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
                 L    ++++++  ++++   + A++  +  V+E                     
Sbjct: 796 PEQ---LKSVHKLIKKVTGDIEHFSYNTAISAFMICVNE--------------------L 832

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +       E+++ +  LL  F P ++ +++  L 
Sbjct: 833 AQSKCTNKELLKDVIKLLAPFAPHISEELWHALG 866


>gi|156937015|ref|YP_001434811.1| valyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156565999|gb|ABU81404.1| valyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 792

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 76/485 (15%), Positives = 162/485 (33%), Gaps = 48/485 (9%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQN-----SRNFRDMADVLDIS 90
           R+ +  G  V+      E      K A     T  + V         + FR++      +
Sbjct: 237 RYKKYHGKKVIVPIYGHEIPVLPHKMADPNFGTGAMMVCSFGDWRDVQIFRELGLTPVKA 296

Query: 91  YDDFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            D+  + TE        +  +    + + + ++G + K           E      E+  
Sbjct: 297 IDEEGKMTECAGPIAGLKVKEAKMKIVELLKEQGYLVKVEDIVHKVPVHERCETPIEIIP 356

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
             +      +   V     E   ++   Y+  LL + +S      PI RR    + +   
Sbjct: 357 MKEYYLKQLEFKDVLKKYAEEMKWQPERYKKNLLQWIDS-VSTDWPISRRRFYATEIPVW 415

Query: 204 LKDLSLSRK-------------------TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGY 244
                  +                        G +  +  + +   W+D+    L  T Y
Sbjct: 416 TCKRCGYKYVPPPGRYYRPWKEDPPIDKCPKCGAREWEGEKRVFDTWMDSSVTVLYITKY 475

Query: 245 LDNPDGSKAKFWP-ADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGE 301
           + + +  K  F     L   G DI+R    Y       L+          +   +  KG+
Sbjct: 476 MRDEEFWKKTFLEGVKLRPQGYDIIRTWLYYSLLRVHQLTGKRAFDLVFINGMGLDPKGK 535

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SK  GNVI P E++ + G DA R+++  E+  G++    ++ ++            N+
Sbjct: 536 KMSKRYGNVIMPEEILNKYGADATRFWIALEVKPGENYRVIENKIQGAQ--KFLTKFLNV 593

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
                S                 E+D+ IL+  + +++++R+       H    +    V
Sbjct: 594 ARYVSSF------PYPEGRVELREADKWILAELAELIEKVRKAYAEMDFHTVAEEFYHFV 647

Query: 422 SE--VDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            +     Y +  K          + + A    +    V++ L ++L    P +++ ++  
Sbjct: 648 WDKFSSHYIELSKKRARMMDERFDEEDAKAAWWTLHTVLKNLLLILAPISPAISDYLWRR 707

Query: 477 LFVAD 481
           L+ ++
Sbjct: 708 LYSSE 712



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 70/218 (32%), Gaps = 19/218 (8%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           + K  I T   YP    HIG A    + D++AR  R+ G +VL+  G D +G  I    +
Sbjct: 38  KPKFVIDTPPPYPAPLWHIGAAVSYAMHDMIARAMRMMGYEVLYPIGFDRNGLPIELYVE 97

Query: 64  N-AGVTTKV----------------FVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
              G+T                   +V++     + +    DI  D+  +T    +    
Sbjct: 98  KYLGLTPWKTDREKFLETCRQVLDSWVEKMKETLKRLLIAADI--DNPYQTDSPDYRAFT 155

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           +  + +   KG +Y+      +  +      D EV               V+  +EE   
Sbjct: 156 QATFIEAWKKGLVYEAERPNNWCPKCRTTIADAEVEYKEMKGIMAYIKFKVKDSDEELVI 215

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                           HP+     +   + +     G 
Sbjct: 216 ATTRPELLCACRAVVVHPDDERYKKYHGKKVIVPIYGH 253


>gi|71908659|ref|YP_286246.1| isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|84029513|sp|Q47BK5|SYI_DECAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71848280|gb|AAZ47776.1| Isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 932

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 77/411 (18%), Positives = 143/411 (34%), Gaps = 34/411 (8%)

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHN 155
           +  +  +              +  + +  E   N+D        E        +      
Sbjct: 399 ERIQHSYPHCWRHKTPIIFRATTQWFIGMENKKNEDASTLRWIAERAVDETQFFPAWGRA 458

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSY-YESHPEFILPIERRNEVISF-----VKSGLKDLSL 209
            ++ M +    + +S  ++  +   +  H E   P  R  E+I        KSG++    
Sbjct: 459 RLEGMMKTRPDWCVSRQRNWGVPIPFFLHKETGQPHPRTAELIEQVALRVEKSGIEAWFS 518

Query: 210 SRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                  G +       +  + VW D+ T +          D +    +PADL++ G D 
Sbjct: 519 LDAAELLGAEADQYVKMKDTLDVWFDSGTTHWHVMRGSHAADHT----YPADLYLEGSDQ 574

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F +       +    P    +     +  KG K+SKS GNVI P +V +++G D L
Sbjct: 575 HRGWFQSSLLSGCAIDGRAPYKGLLTHGFVVDGKGHKMSKSKGNVIAPQQVSDKMGADIL 634

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD--GMIPTPGAF 383
           R +       G+    D+  + KRV  +    I N + R +   + D+D    +     +
Sbjct: 635 RLWTASTDYSGELTISDE--ILKRV-VEGYRRIRNTL-RFLLANVSDFDAATDMLPIDQW 690

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP 441
            E D   L++   +    R +      HR +  + +  SE     Y D  K   L  T P
Sbjct: 691 LEIDRYALALTRELQDGCRADFDKYEFHRVVQALQTFCSEDLGGFYLDILKD-RLYTTAP 749

Query: 442 DRAS--TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
              +  +       + +    LL       A +++ +L   AD++  FQ  
Sbjct: 750 KSVARRSAQSALWHITQAFVRLLAPITAFTAEEVWQVLTGKADDSVMFQVW 800



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 26/64 (40%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  +     Y N   HIGHA   ++ D++ R   L G D  +  G D HG  I    
Sbjct: 47  GRPRFTLHDGPPYANGDIHIGHAVNKVLKDIIVRSKTLSGFDAPYVPGWDCHGLPIEHQI 106

Query: 63  QNAG 66
           +   
Sbjct: 107 EKLH 110


>gi|302550788|ref|ZP_07303130.1| isoleucyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302468406|gb|EFL31499.1| isoleucyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 1047

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/387 (13%), Positives = 123/387 (31%), Gaps = 13/387 (3%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            H            +   Y    +    L  E    +        G+Y +  +N + W  
Sbjct: 395 PHCWRCHTALLYYAQPSWYIRTTAIKDRLLAENENTNWFPDTVKHGRYGDWLNNNIDWAL 454

Query: 162 EEGYFFRLS----AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
               ++          +  L+   S  E           +   +  + +++ +      G
Sbjct: 455 SRNRYWGTPLPIWRCAEDHLTCVGSLAELTELTGTDQSGLDPHRPFIDEVTFACPQDGCG 514

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                 P+ ++  W D+ +      GY           +PA       D     F+ +  
Sbjct: 515 STATRVPE-VIDAWYDSGSMPFAQWGYPYKNKELFDTRYPAQFICEAIDQTRGWFYTLMA 573

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
              L+         V     +   G K+SK LGN ++PI ++++ G DA+R+F+    + 
Sbjct: 574 VGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNTLEPIPLMDQHGADAVRWFMAAGGSP 633

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILSV 393
                     +++ V   L      +  +++      +      P        D  +LS 
Sbjct: 634 WAARRVGHGTIQEVVRKTLLTYWNTVAFQALYARTSGWAPSAADPAPADRPVLDRWLLSE 693

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
              +  ++ +++      RA   + + V ++  ++  +      + +     T      E
Sbjct: 694 LHALTDQVTKSLDAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDKAALRT----LHE 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVA 480
           V+  +  L+    P +  +++  L V 
Sbjct: 750 VVETVTQLMSPLTPFITERVWQDLIVP 776



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 40  EGRPEWVYYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVARKAGWDCHGLPVELA 99

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +       D  RT +  +
Sbjct: 100 VEKELGFSGKQDIEEYGIAEFNAKCRESVTRHTNAFEELTTRMGFWTDLHDPYRTMDPEY 159

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I  KG + +      +  R     +D E+ +G +
Sbjct: 160 IESVWWSLKEIFGKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 203


>gi|167585706|ref|ZP_02378094.1| isoleucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 945

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +              A  +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDALQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D        G + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAQHALPVGEWLEIDRYAVAFSAQLQAELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K        +     +       + + L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSTARRSAQTALYHLTQGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA 65
            +  
Sbjct: 114 IEKQ 117


>gi|241956980|ref|XP_002421210.1| cytoplasmic isoleucine-tRNA synthetase, putative [Candida
           dubliniensis CD36]
 gi|223644553|emb|CAX41371.1| cytoplasmic isoleucine-tRNA synthetase, putative [Candida
           dubliniensis CD36]
          Length = 1168

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 105/266 (39%), Gaps = 11/266 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y    +      +PA+    G D     F+ +      L  
Sbjct: 610 EEVFDCWFESGSMPYASKHYPFENEKKFLDAFPANFISEGLDQTRGWFYTLTVLGTHLFK 669

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP  V+E+ G DALR +L+       +   +
Sbjct: 670 TAPYQNVIVTGIVLAADGKKMSKRLKNYPDPTLVLEKYGADALRLYLINSPVLRAETLKF 729

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+K+ V++ L         +  +  +  KD        G+       D  +L+    
Sbjct: 730 KEEGVKEIVSSVLLPWYNSYKFLKDAADLFKKDNGKDFVYDGSLHSTNVMDRWLLASIQS 789

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVE 453
           +++ I E M    ++  + +++  + ++ + Y   + ++       + +     L    E
Sbjct: 790 LIKFIHEEMTGYRLYTVVPRLLHFIDDLTNWYIRFNRRRIKGYAADDVEDTQKGLNTLAE 849

Query: 454 VIRQLAILLQAFVPKLANKIFDILFV 479
            +  L+  +  F P LA+ I+  + V
Sbjct: 850 ALLTLSRAMAPFTPYLADGIYQRIKV 875



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           ++           +    PH GH     + D++ R+  ++G  V    G D HG  +  +
Sbjct: 122 EDLPPFAFFDGPPFATGTPHYGHILASTVKDIIPRYATMNGYHVERRFGWDTHGLPVEHE 181

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +   +T+K                     + D+  R  + +   +D+  D   +T   
Sbjct: 182 IDKKLNITSKEDVYAMGIDKYNAECRAIVMRYADEWRRTIKRLGRWIDMDNDY--KTLYP 239

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++    +K++ +K  +Y+G     YS       ++ E  +   
Sbjct: 240 EFMESVWWAFKELFNKDAVYRGLRVMPYSTACTTPLSNFEAQQNYK 285


>gi|89891688|ref|ZP_01203191.1| valyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89516023|gb|EAS18687.1| valyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 877

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 95/268 (35%), Gaps = 14/268 (5%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSK-AKFWPADLHVIGKDILRFH--AIYWPAFLL 280
              ++  W  +    ++    +  P+  +   ++P    V G DIL F    +    + L
Sbjct: 453 ENDVLDTWFSSWLWPISVFNGVLEPENEEINYYYPTRDLVTGPDILFFWVARMIVAGYEL 512

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K   +      +  K+SKSLGN  D + +IE  G D +R  L+   A G D  
Sbjct: 513 RDEKPFDKVYLTGLVRDKQRRKMSKSLGNSPDALGLIENYGADGVRVGLLLSAAAGNDIM 572

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D+D  ++       N + N           + D  +  P    +      S  S+VL+E
Sbjct: 573 FDEDLCQQ--GKGFVNKMWNAYRLIDGW---EVDESLSQPTYALQGLNWYKSRFSQVLEE 627

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           + ++     I   L     L+         +  KP   K  +      V+     +    
Sbjct: 628 VEDHYSKYRISDVLMTSYKLIYDDFCGWLLEIIKPEYQKPIDSKTLREVIA----LFEDN 683

Query: 459 AILLQAFVPKLANKIFDILFVADENRCF 486
             L+  F P +  +++  +   D N   
Sbjct: 684 LRLMHPFTPFITEELWQAISTRDVNEAL 711



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 49/160 (30%), Gaps = 20/160 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ERE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  ERESYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLKGYNACWVPGTDHASIATEAKV 91

Query: 63  QNAGV----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHH 103
                                    + D+      +    L  S D + R   T +    
Sbjct: 92  VKKLKEQGIDKNDLSREEFLSHAWDWTDEYGGIILEQLKKLGASCD-WSRTKFTLDDDMS 150

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +   ++  + +K  IY+G     +    +   +D+EV  
Sbjct: 151 ASVIKVFVDLYNKDMIYRGFRMVNWDPEAQTTLSDEEVIY 190


>gi|295395007|ref|ZP_06805219.1| valine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972166|gb|EFG48029.1| valine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 881

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 118/356 (33%), Gaps = 18/356 (5%)

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY----ESHPEF 186
           RD       E+           + N V+ +  +    R   +   +  +Y    +  P++
Sbjct: 426 RDALIARGREIDWHPAFMRSRYE-NWVEGLSGDWLVSRQRYFGVPIPLWYRLDGQGQPDY 484

Query: 187 ILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD 246
             PI  RN+ +              +  D       DP  ++  W  +        G+  
Sbjct: 485 DDPIVPRNDQLPVDPQAHTPEGYRDEQRDQPGGFTGDPD-VLDTWATSSLTPQLIGGWST 543

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
           + +    K +P DL   G DI+     +    A  ++ ++P      S   +    +K+S
Sbjct: 544 DDN-LFNKVFPFDLRPQGHDIIRTWLFSTVVRANSINGSIPWTNTALSGWILDPDRKKMS 602

Query: 305 KSLGNVIDPIEVIEE----VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           KS GNV+ P ++I E     G DA+RY+       G D  YD   ++  +   LA  + N
Sbjct: 603 KSKGNVVVPSDIIAETKPGFGPDAVRYW-AASARLGGDTAYDVSQMQ--IGRRLAMKLLN 659

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
             S+           +          D++ L+     +++            AL    S 
Sbjct: 660 -ASKFALAQGVHAGHVQDFAHVTHPLDQAFLAKLRATIEQAGAYFAEYDYAHALRVTESF 718

Query: 421 VSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
             E  D Y +  K             +        +  L  L   F+P +  +++ 
Sbjct: 719 FWEFTDDYVELVKDRSYGAQGEQAQLSAHVTLATALDALLRLFAPFMPFVTEEVWS 774



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 39/167 (23%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE++Y I T     +   H+GH +     DV+AR+ R+ G +V +  G D++G    +
Sbjct: 42  TTREEVYAIDTPPPTASGSLHVGHVFSYTHTDVMARYMRMTGKNVFYPMGWDDNGLPTER 101

Query: 61  AAQN-------------AGVTTKVFVDQNS-----------------------RNFRDMA 84
             QN                T      +N                        + F  + 
Sbjct: 102 RVQNYYGVKCEPSLPYDPDFTPPEKPAKNPRDFVAVSRLNFIELCEKLSAEDEKVFEQLF 161

Query: 85  DVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
             + +S D     RT + +     +  +      G  Y       + 
Sbjct: 162 RSVGLSVDWNYSYRTIDDKSRAVSQRAFLHDLKAGQAYSQDAPTMWD 208


>gi|123437181|ref|XP_001309389.1| isoleucyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121891114|gb|EAX96459.1| isoleucyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 1069

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 109/276 (39%), Gaps = 13/276 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +   +      +    +     AD    G D     F+ +   + LL    
Sbjct: 526 VFDCWFESGSMPFSQFHIPFSGMEWRQ----ADFIAEGLDQTRGWFYTMTILSSLLGHPS 581

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + +   +   G+K+SK   N  DP  +++  G DA+R +L    AC  D F  KD
Sbjct: 582 PFKNVIVNGLIMAADGKKMSKKEKNYTDPELIMDRFGADAVRLYLTNSPACHADPFSFKD 641

Query: 345 G----LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
                + ++      N I   V + +               +    D+ ILS  +R++Q 
Sbjct: 642 DDVAMIVRQTMLPWMNSIKFWVEQVIRHGNNFKRNTELAYSSENILDKWILSKINRLIQH 701

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           +   M    ++  L +++  + +++ ++       LKK     A T + V  EV+ QL++
Sbjct: 702 VHREMGLYQLYNVLPELVKFIDQLNNWYVRLNRDRLKKGKD--AETGIAVLFEVLLQLSL 759

Query: 461 LLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKP 495
           L+  F P  A   +  L  A  E+   QS+   + P
Sbjct: 760 LMAPFAPFFAEYAYQHLKPALPESEQLQSIHFVMLP 795



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 20/159 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +        +    PH GH     I DV+ R+    G  V    G D HG  +   
Sbjct: 36  EGRPEYIFYDGPPFATGTPHYGHILAGTIKDVVTRYAYQTGHSVPRRFGWDTHGVPVEHE 95

Query: 62  AQN------AGVTTKVF-VDQNSRNFRDMADVLDISYDDFIRTT-------------EKR 101
                      V  K   +   +   R +       ++  +R               +  
Sbjct: 96  VDKMLNIKDKTVIEKEMGIGVYNEKCRSIVMKHQQDWERVVRRCGRWIDFVNSYKSMDVT 155

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
             ++   ++K++ ++ ++Y G     YS       ++ E
Sbjct: 156 FMESVWWVFKQLWEQDNVYCGVKVMPYSYGCGTPLSNFE 194


>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|81485032|sp|Q8RH47|SYI_FUSNN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 933

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 144/448 (32%), Gaps = 36/448 (8%)

Query: 71  VFVDQNSRNFRDMADVLDI--------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           V+ + N    + + +   I        SY    R+            + ++   GD+ + 
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEG-GDLREK 431

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                  +     +  + +    + +          W      F+     ++        
Sbjct: 432 TLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILD 491

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
               ++     N  +      L    L  K    G+K+  +   IM VW D+ +++    
Sbjct: 492 RICDLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETN-IMDVWFDSGSSHRGVL 550

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              +          P DL++ G D     FH     +   + + P    +        +G
Sbjct: 551 EVWEGLHR------PCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEG 604

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGN + P +VI+  G D LR +    +    D     + +K+   ++    I N
Sbjct: 605 KKMSKSLGNTVSPEDVIKVYGADILRLWC-GSVDYRDDVRISDNIVKQ--MSEAYRRIRN 661

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-- 417
                +      +            E D+  L+    + + + E+      +     +  
Sbjct: 662 TARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHY 721

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +     Y D  K     +K +         V  EV+  L  ++   +   A +I++ 
Sbjct: 722 FAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWES 781

Query: 477 LFVADENRCFQSL---------DQRLKP 495
           L    E R  +S+         D+ LKP
Sbjct: 782 L--PAETRESESIFLADWYVNNDEYLKP 807



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + +  +     ++    L +   +D+   T + R    
Sbjct: 108 VVKEVGVGKAREMSALEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I   G I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYVNGYIFKGLKPVYWSPATETALAEAEIE-----YYDHVSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + + +     +   + LP      +      GL  
Sbjct: 223 LLDKIGFNEDVYVLIWTTTPWTLPANVAICLNENFDYGLYK 263


>gi|325977750|ref|YP_004287466.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177678|emb|CBZ47722.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 932

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 103/273 (37%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNAREGLEYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D LK+             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILKQTSET------YRKIRNTLRFLIANTADFNPNTDAVAYENLRAVDKYMTVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            ++++  IR+  +          V++   V     Y D  K     +   + A   +   
Sbjct: 685 FNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEAADNLARRQMQTV 744

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              ++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FYDILVKITKLLTPILPHTAEEIWSYLEFEPEE 777



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFNLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|320527687|ref|ZP_08028859.1| leucyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131930|gb|EFW24488.1| leucyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 799

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 68/198 (34%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H GH       DV+ R  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKYYALDMFPYPSGSGLHAGHPEGYTATDVICRMKRMQGFNVLHPMGFDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F ++N   F+        SYD    I T +   +   + ++K++ + G  
Sbjct: 90  AIKTGNNPATFTEKNIETFKKQLRAFGFSYDWEREISTADPSFYHWTQWIFKRLFEDGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DEV  G           PV       +   + AY +KLL  
Sbjct: 150 KCVDMPVNWCEELGTVLSNDEVIDGKS----ERGGYPVIRKNMRQWVIDIPAYAEKLLEG 205

Query: 180 YESHPEFILPIERRNEVI 197
            E+        E +   I
Sbjct: 206 LETIDWPESTKEIQRNWI 223



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 91/267 (34%), Gaps = 47/267 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P DL+V G +    H +Y   +         ++  
Sbjct: 497 WYFLRYIDPKNDKAIADPELLKHWMPVDLYVGGPEHAVGHLLYSRMWNRYLYDKGIVTTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K +     +   G K+ K      IDP  +IE+ G D +R + +          + 
Sbjct: 557 EPFQKLLHQGMILGANGIKMGKRYPEFAIDPNVLIEQYGADTVRLYEMFMGPLEASKPWS 616

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G+         +G    + R   +I++         G+  E       V    ++++ 
Sbjct: 617 EQGV---------DGAHKWLERVHRLIVESNKLSDTNDGSLDE-------VYHAAVKKVT 660

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            ++++  ++ A++Q++  ++E  +     KP+                    +     + 
Sbjct: 661 SDIESLNLNTAISQMMIFINECYKAETLYKPY--------------------MEGFVQMF 700

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
             + P L  +++  L   D    F++ 
Sbjct: 701 ACYAPHLGEELWQFLG-HDNTLTFEAW 726


>gi|294933045|ref|XP_002780570.1| hypothetical protein Pmar_PMAR001164 [Perkinsus marinus ATCC 50983]
 gi|239890504|gb|EER12365.1| hypothetical protein Pmar_PMAR001164 [Perkinsus marinus ATCC 50983]
          Length = 1145

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/449 (15%), Positives = 146/449 (32%), Gaps = 34/449 (7%)

Query: 52  DEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD----MADVLDI-SYDDFIRTTEKRHHDTC 106
           DE G+   +     G+  K        + +     + + ++I SY    R+     +   
Sbjct: 363 DESGRFTDEVPPYQGMHVKEADKHIKEDLKKRGLLLHNGMEIHSYPHCWRSDTPLIYRAI 422

Query: 107 RILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
              + K+ +  D      +        +++  + N     +            P+     
Sbjct: 423 GSWFIKVEEVRDQLLANNEKSAWVPRHVQEGRFRNWLADARDWGVSRNRYWGTPIPIWVS 482

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
           + +   +       L  Y  HP   +     +++    K+G   L               
Sbjct: 483 DDFQEVVCIGSVAELERYAGHPVPDIHRHFIDDIKIPSKTGRGYLHR------------- 529

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y         K +PAD    G D     F+ +   A  L
Sbjct: 530 -VDEVFDCWFESGSMPYAQVHYPFENKEKFEKNFPADFVAEGLDQTRGWFYTMTVIATHL 588

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
                    V +   +   G+K+SK L N  DP EV +  G DA+R ++        +  
Sbjct: 589 FDEPAFKNLVVNGLILAADGKKMSKRLKNYPDPTEVFDRYGADAVRMYMCNSPVVRAEPL 648

Query: 340 FYDKDGL---KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILS 392
            + ++G+    K V   L N    LV  +     ++     P      ES    D  I +
Sbjct: 649 KFREEGVRDTVKEVFLPLYNAYRFLVQETCRFEKQENTKFSPDRTYIHESSNPTDHWIYA 708

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVT 451
               +L+  R  ++   ++  + +++S + ++ + Y    +       +       L   
Sbjct: 709 ASQELLKYTRTELEAYRLYNIVGKLVSFLDDLTNWYIRMNRDRMRGGIDMQNTLESLNTL 768

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480
            +V+  L I+L    P +   I+  L +A
Sbjct: 769 YDVLLDLTIVLAPITPFITELIYQNLRLA 797



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +    PH GH     I DV+ R+    G  V    G D HG  +   
Sbjct: 39  QGKPEYVFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQTGHHVERRFGWDCHGLPVEHE 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + ++ +R +       I +D+  +T ++  
Sbjct: 99  IDKDYNIGSKADVMKWGIANYNEACRSIVTRYTKEWRQIVTRFGRWIDFDNDYKTMDRNF 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+      YS       ++ EV +G  
Sbjct: 159 MESVWWVFKQLFDKGLVYRAFRVMPYSTALCTPLSNFEVAQGYK 202


>gi|306832986|ref|ZP_07466118.1| isoleucine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424885|gb|EFM28019.1| isoleucine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 932

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 103/273 (37%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNAREGLEYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D LK+             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILKQTSET------YRKIRNTLRFLIANTADFNPNTDAVAYENLRAVDKYMTVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            ++++  IR+  +          V++   V     Y D  K     +   + A   +   
Sbjct: 685 FNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEAADNLARRQMQTV 744

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              ++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FYDILVKITKLLTPILPHTAEEIWSYLEFEPEE 777



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFNLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|227524746|ref|ZP_03954795.1| leucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088100|gb|EEI23412.1| leucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 811

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 9/189 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    +
Sbjct: 33  TSKDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMARMQGKNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   + F  QN + F+     L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 93  YALKTGHNPRSFTAQNIKTFKRQIRSLGFSYDWDREINTTDPAYYKWTQWIFEQLYKKGL 152

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 153 AYEDNIEVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 208

Query: 177 LSYYESHPE 185
           +   ++   
Sbjct: 209 IDDLDTVDW 217



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/411 (14%), Positives = 135/411 (32%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYND----DEVYKGADGQYY 150
            + R ++  +        + + GD+    Y+G     +  + +     + +    D    
Sbjct: 349 HDDRDYEFAKKFGLSIVPVIEGGDVADAAYTGDGPHFNSGFMDGMNKKNAIKAAIDWLKD 408

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           +             + F    Y  + +                     LP  +  +    
Sbjct: 409 HDAGKERVNYRLRDWIFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPKAKDIQTSGG 468

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L+      D   +        M  W         Y+         D  K K+W
Sbjct: 469 KESPLANLTDWVNVVDKNGRKGKRETNTMPQWAGSSWYWLRYIDPHNDHAIADPEKLKYW 528

Query: 257 -PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +              P  K V     +    EK+SKS 
Sbjct: 529 SPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFQKLVNQGMILGTNHEKMSKSK 588

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI+P ++++E G D LR + +          +  +G+         NG  + + R   
Sbjct: 589 GNVINPDDIVDEYGADTLRVYEMFMGPIDAAKPWSTEGI---------NGAHHWLDRVWR 639

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ D + +       T +D  +  V ++ ++ +  +  +   +  ++Q++  V++  + 
Sbjct: 640 LMIDDNNHLRDR--VTTINDGHLDKVYNQTVKVVTNDFAHMRFNVGISQMMVFVNDAYK- 696

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + ++ +     +L    P +A +++ +L 
Sbjct: 697 -------------------ADALPIQYMEGFVKMLSPLAPHIAEELWSLLG 728


>gi|330954065|gb|EGH54325.1| methionyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 499

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/418 (16%), Positives = 131/418 (31%), Gaps = 36/418 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G + +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R  +     D    ++  + D G     D
Sbjct: 63  QGVDPVELARRNSDRIEVSLAAINIQPDNWMRPHDNAWFADAVGEVFSALRDVGAIECRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY----QD 174
             +           EA+   +  Y GA+      ++       E     R        Q 
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTDLRCKLCGQPSQW 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGI--------KIPDDP 224
           K +           P  R   +    +  L            DWG+         +  D 
Sbjct: 183 KTVHRAFLKLAGFKPQLRDRLLGQSWRKPLDSWLRDSLEHLHDWGVTRPGDGGLDLQADG 242

Query: 225 QYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWPA 277
            + ++ W   L  Y+       +         ++W +     +H +G D +  HAI +PA
Sbjct: 243 SFRVHTWFMGLAGYMAAFREHADRVGRPELFRQYWQSGQGTLVHFLGFDCVFSHAIVYPA 302

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L       
Sbjct: 303 QLSALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLASIAPEE 362

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            +G +            LA           +++    +           +D  +L   
Sbjct: 363 SEGDFRLAQF-------LAWRTEVFSEFFPALLDAGSNRDDHWWSGLCGADAGLLEAL 413


>gi|288904820|ref|YP_003430042.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731546|emb|CBI13101.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 932

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 17/270 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNAREGLEYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKK--RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                D LK+       + N +  L++ +      + +  +         D+ +    ++
Sbjct: 631 VRISMDILKQTSETYRKIRNTLRFLIANTADF---NPNTDVVAYENLRAVDKYMTVKFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVE- 453
           ++  IR+  +          V++   V     Y D  K     +   + A   +      
Sbjct: 688 LVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEAADNLARRQMQTVFYD 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++ ++  LL   +P  A +I+  L    E 
Sbjct: 748 ILVKITKLLTPILPHTAEEIWSYLEFEPEE 777



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFNLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|251794004|ref|YP_003008736.1| isoleucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535403|gb|ACS98649.1| isoleucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 940

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 149/448 (33%), Gaps = 56/448 (12%)

Query: 82  DMADVLDISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
           D+     +S D  FI TTE          +       +++ +   + K  +S  +  R +
Sbjct: 351 DLPMAGLVSNDGKFISTTEFFAGKGVFEANPLVVEKLQEVGNLLKVEKIKHSYPHCWRHK 410

Query: 134 ---AYYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEF 186
               +    + + G + Q    Q       V+W+ + G        +++          +
Sbjct: 411 TPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTW 470

Query: 187 ILPI--ERRNEVISFVKSGLKDLSLSRKTFDW-GIKIPDDPQY----------------I 227
            +P+      E        L+ L    K  +  GI+   D                    
Sbjct: 471 GVPMTLFVHKETEELHPRTLELLEEVAKRVEKAGIQAWWDLDEKELLGADAETYRKVPDT 530

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G        D+++ G D     F +    +       P
Sbjct: 531 LDVWFDSGSTYSSVVANRPEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDNKAP 585

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 586 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 643

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P   A         D   ++      +E
Sbjct: 644 ILKR-----AADSYRRIRNTARFLLANLNGFDPQRDAVKPEDMMSLDRWAVACALDAQKE 698

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I++   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 699 IKDAYDNYQFHAVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 758

Query: 458 LAILLQAFVPKLANKIFDILFVADENRC 485
           L   +   +   A++++  L      R 
Sbjct: 759 LVRWMAPILSFTADEVWGYLPQTAAARA 786



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRAKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEAHI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGY 165
                K+   G +YKG     + L   +   + EV              P V  +E E  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAVSAVEIEEE 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   + + ++  L      R
Sbjct: 226 FNAVGKGHGKLSAVIWTTTPWTIPSNRGIALNAELEYNLVQFGDER 271


>gi|227513601|ref|ZP_03943650.1| leucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083117|gb|EEI18429.1| leucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 811

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 9/189 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    +
Sbjct: 33  TSKDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMARMQGKNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   + F  QN + F+     L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 93  YALKTGHNPRSFTAQNIKTFKRQIRSLGFSYDWDREINTTDPAYYKWTQWIFEQLYKKGL 152

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 153 AYEDNIEVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 208

Query: 177 LSYYESHPE 185
           +   ++   
Sbjct: 209 IDDLDTVDW 217



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 61/411 (14%), Positives = 136/411 (33%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            + R ++  +        + + GD+    Y+G     +  + +    +D +    D    
Sbjct: 349 HDDRDYEFAKKFGLSIVPVIEGGDVADAAYTGDGPHFNSGFMDGMNKEDAIKAAIDWLKD 408

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           +             + F    Y  + +                     LP  +  +    
Sbjct: 409 HDAGKEKVNYRLRDWIFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPKAKDIQTSGG 468

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L+      D   +        M  W         Y+         D  K K+W
Sbjct: 469 KESPLANLTDWVNVVDKNGRKGKRETNTMPQWAGSSWYWLRYIDPHNDHAIADPEKLKYW 528

Query: 257 -PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +              P  K V     +    EK+SKS 
Sbjct: 529 SPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFQKLVNQGMILGTNHEKMSKSK 588

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI+P ++++E G D LR + +          +  +G+         NG  + + R   
Sbjct: 589 GNVINPDDIVDEYGADTLRVYEMFMGPIDAAKPWSTEGI---------NGAHHWLDRVWR 639

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ D + +       T +D  +  V ++ ++ +  +  +   +  ++Q++  V++  + 
Sbjct: 640 LMIDDNNHLRDR--VTTINDGHLDKVYNQTVKVVTNDFAHMRFNVGISQMMVFVNDAYK- 696

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + ++ +     +L    P +A +++ +L 
Sbjct: 697 -------------------ADALPIQYMEGFVKMLSPLAPHIAEELWSLLG 728


>gi|253988036|ref|YP_003039392.1| isoleucyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779486|emb|CAQ82647.1| isoleucyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 937

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 128/389 (32%), Gaps = 42/389 (10%)

Query: 121 KGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDK 175
           +  Y   +  +    +       +    +G       + N VQW+   G     +  +++
Sbjct: 400 QHSYPCCWRHKAPIIFRATPQWFISMDQNGLRKQSLKEINDVQWIPGWGQARIEAMVENR 459

Query: 176 LLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------ 225
                     +  P+     +  E +      L +    R   D GI+   D        
Sbjct: 460 PDWCISRQRTWGTPMSLFVHKETEELHPRTIELMEEVAKRVEVD-GIQAWWDLDPAELLG 518

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + + +         G+      AD+++ G D     F + 
Sbjct: 519 DDAANYVKIFDTLDVWFDSGSTHSSVVDARSEFQGNS-----ADIYLEGSDQHRGWFMSS 573

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +    P  + +     +  +G K+SKS+GN I P +V++++G D LR ++    
Sbjct: 574 LMISTSMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMDKLGADILRLWVASTD 633

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESIL 391
             G+    D+     + +AD    I N   R +   L  +D       P      D   +
Sbjct: 634 YTGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPEQHMVKPEEMAVLDRWAV 689

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVL 448
                    I +  +    H  + +++   S      Y D  K  +   K++     +  
Sbjct: 690 GRAQAAQAGIAKCYEEYDFHTVVQRLMQFCSVEMGSFYLDIIKDRQYTAKSDSLSRRSCQ 749

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +   L   +   +   A+++++ L
Sbjct: 750 TALYHIAEALVRWMAPILSFTADEVWNEL 778



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 16/165 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGMAGYDSPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +                           +    R   K   +  +  + ++   GD  + 
Sbjct: 107 EQIIGKPGE-------------KFSAAEFRAECRKYAKEQVEGQKKDFIRLGVLGDWERP 153

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
             +  +            V       +      PV W  + G   
Sbjct: 154 YLTMDFKTEANIIRALSRVIAN---GHLLKGAKPVHWCTDCGSSL 195


>gi|193595368|ref|XP_001943374.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 1238

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 9/270 (3%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G         +   W ++ +       Y        ++ +PAD    G D     F+ + 
Sbjct: 512 GFPPLRRITEVFDCWFESGSMPYAQQHYPFENRKEFSENFPADFIAEGIDQTRGWFYTLL 571

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  L    P    + +   +   G+K+SK   N  DP+EV+ + G DALR +L+    
Sbjct: 572 VISTALFNKPPFKNLIANGLVLASDGQKMSKRKKNYPDPMEVVNKFGADALRLYLINSPV 631

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF------TESDE 388
              +    K+   K +  DL     N     +  I      M      +       + D 
Sbjct: 632 VRAENLRFKEDGVKEILKDLFLPWYNAYRFFIQNIRDSSGNMYKPNKNYYSAPSENKMDR 691

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTV 447
            I S    ++  IR  M    ++    +++  +    + Y    +     +         
Sbjct: 692 WITSWTQSLIAFIRREMAAYRLYTVAPRLVKFIDVLTNWYVRLNRQRLKGECGHAEWQQS 751

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L     V+  +  L+  + P +   ++  L
Sbjct: 752 LDTLYHVLMTMVCLMAPYTPFICELMYQNL 781



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + +        +    PH GH     I DV+ R+    G  V    G D HG  +   
Sbjct: 36  KGKPRFSFYDGPPFATGLPHYGHILAGAIKDVVTRYAHQTGHHVERRFGWDTHGLPVEFE 95

Query: 62  AQN--AGVTTKVF----VDQNSRNFRDMADVLD-------------ISYDDFIRTTEKRH 102
                     +      +D+ +   R +                  I + +  +T     
Sbjct: 96  IDKLLEIKGPEDVAKMGIDKYNAECRKIVMRYASDWETIVTRLGRWIDFKNDYKTLYPWF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++ ++ +KG +Y+G     +S       ++ E
Sbjct: 156 MESVWWVFSELWNKGMVYRGVKVMPFSTACSTPLSNFE 193


>gi|223933932|ref|ZP_03625893.1| isoleucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|302023468|ref|ZP_07248679.1| isoleucyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330832334|ref|YP_004401159.1| isoleucyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223897409|gb|EEF63809.1| isoleucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329306557|gb|AEB80973.1| isoleucyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 929

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 104/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLAYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KG K+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGMKMSKSLGNTILPSDVEKQFGAEILRLWVTSVDTS-ND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +L  
Sbjct: 631 VRVSMDILGQVSET------YRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLLVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT----NPDRASTV 447
            ++++ +IRE   N         V++ V       Y D  K           +  +  TV
Sbjct: 685 FNKLVAQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEHEAEE 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T  K +     
Sbjct: 105 LAKQGVKRKEMDLVEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|319425458|gb|ADV53532.1| isoleucyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 940

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 130/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +   +R     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVANRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEADQYRKVTDTLDVWYDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFDPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E       H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYDQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   + LK
Sbjct: 749 RSCQSALFHIAEAMVRWIAPVLSFTADEVWQLLPGERDAYVFTQEWYEGLK 799



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKITAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSYYSHPVSMVIWTTTPWTLPANR 251


>gi|319744572|gb|EFV96925.1| isoleucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 930

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           + +    IM VW D+ ++      +    +  +   +PADL++ G D     F++    +
Sbjct: 517 LFEKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    
Sbjct: 571 VAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILS 392
           D     D LK+             +  ++  ++ +     P   A         D  +  
Sbjct: 630 DVRISMDILKQTSET------YRKIRNTLRFLIANTSDFNPKQDAVAYENLGVVDRYMTI 683

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRAST 446
             ++V+  I +             V++   V     Y D  K     +        R  T
Sbjct: 684 KFNQVVDTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQT 743

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
           V Y   +++ +L  LL   +P  A +I+  L   +E 
Sbjct: 744 VFY---DILVKLTKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTPDYEADQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|326390266|ref|ZP_08211826.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993711|gb|EGD52143.1| leucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 816

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  + H+GH Y     D  AR  ++ G +V    G D  G      A 
Sbjct: 30  KKLYCLEMFSYPSGAKLHVGHWYNYGPTDSWARMKKMQGYEVFHPMGFDAFGLPAENYAI 89

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N R        +     +D  + T    ++   + ++ K+ + G  Y+
Sbjct: 90  KTGIHPYDSTMENIRTMEKQLREMGATFDWDYEVITCLPEYYKWTQWIFLKLFEAGLAYR 149

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G            V   +   +FF+++AY ++LL   +
Sbjct: 150 KKAPVNWCPSCQTVLANEQVIDGK----CERCGTEVTKKDLTQWFFKITAYAEELLEKLD 205

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I    
Sbjct: 206 ELDWPEKTKIMQRNWIGKSD 225



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/295 (20%), Positives = 110/295 (37%), Gaps = 35/295 (11%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-----PADLHVIGKDI 267
               G K   DP   +  ++D  + Y        N      K W     P D +V G + 
Sbjct: 475 CPKCGGKALRDPD-TLDTFVD-SSWYFLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEH 532

Query: 268 LRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P    V     +   G ++SKS GNVI P E I+E
Sbjct: 533 ATMHLLYARFVTKALRDLGYLDFDEPFKSLVHQGTILGPDGSRMSKSKGNVISPDEYIKE 592

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G ++ DG+K            N V R +   ++  +    T
Sbjct: 593 YGSDVFRLYLMFGFAYSEGGPWNDDGIKAISR------FVNRVERFIDKFIETRNNPGKT 646

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +  +  V    ++ + E+ +    + A+A+++ LV+ + +Y            
Sbjct: 647 KDEMGKDENELNYVRHYAIKGVTEDAERFQFNTAIARIMELVNALYKY-----------E 695

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                  + +   EV+  L  LL  F P  + ++++ L       N+ +   D++
Sbjct: 696 ADVEVKNIKFY-EEVVADLIKLLAPFAPHFSEEMWEKLGYEYSVFNQKWPKWDEK 749


>gi|322655028|gb|EFY51340.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
          Length = 507

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 121/361 (33%), Gaps = 43/361 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  + +  ++  L  +    K
Sbjct: 4   VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAK 63

Query: 213 TFD-WGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
             +  GI+   D                    + VW D+ +       Y       +   
Sbjct: 64  RVEVDGIQAWWDLDPKEILGEDADQYEKVPDTLDVWFDSGSTS-----YSVVDARPEFAG 118

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P
Sbjct: 119 HAADMYLEGSDQHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSP 178

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + 
Sbjct: 179 QDVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANL 231

Query: 374 DGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
           +G  P      P      D   +       QEI +  +    H  + +++   S      
Sbjct: 232 NGFNPATDMVKPEEMVVLDRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSF 291

Query: 427 YFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           Y D  K  +   K +     +       +   L   +   +   A++I+  L    E   
Sbjct: 292 YLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYV 351

Query: 486 F 486
           F
Sbjct: 352 F 352


>gi|322389020|ref|ZP_08062590.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144325|gb|EFX39733.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 930

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 103/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+  +N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYENFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D    T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWDHPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|284997892|ref|YP_003419659.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445787|gb|ADB87289.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 980

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 17/371 (4%)

Query: 131 RDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +DE     + V    D      +     ++        F  +     +     +      
Sbjct: 353 KDEMLKEIENVNWIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICEKCNNVIVVGS 412

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLD 246
             +  +  I  V + L    +            +      +  VW D+   +  + G   
Sbjct: 413 REDLESIAIDSVPNDLHRPWIDNVRVKCNKCGGVAKRIADVADVWFDSGVAFFASLGKDW 472

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P DL + G D L   F ++     +L    P    +     +  +G ++ 
Sbjct: 473 QEKWKELG--PVDLVLEGHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGFMLDEQGREMH 530

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN ++P  VI+  G D LR +L+R     +D  +    L +    DL       V  
Sbjct: 531 KSLGNYVEPSVVIQRYGRDILRLWLLRNTT-WEDARFSWRAL-ELTKRDLQIIWNTYVFA 588

Query: 365 SVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           S+ M L +++ +  T           D  ILS  + +L+++ E+M+N  +H     +I+ 
Sbjct: 589 SMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSMLKKVNESMKNYKVHEMANYLINF 648

Query: 421 -VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V +V R Y    +     + N      + Y+   +++Q  IL    +P ++ KI+    
Sbjct: 649 LVEDVSRFYIRLIRKRAWIEANTQDKIAMYYILYFILKQWIILASTIIPFISEKIYKSFV 708

Query: 479 V-ADENRCFQS 488
           V   E+   +S
Sbjct: 709 VNPKESVSMES 719



 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 20/155 (12%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAA------------------QNAGVTTKVFVDQNS 77
           R+ RL G  V    G D HG  I  A                   +N     K F   N+
Sbjct: 2   RYERLLGKKVHDQPGYDTHGLPIEVATERLLGILNKQEIIDKIGVENFINKCKEFALSNA 61

Query: 78  RNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
                    + +   ++    T +  +  +   + KK  +KG + KG     +  R E  
Sbjct: 62  TKMTQNFKDVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETT 121

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
            +D EV +  D +  +         EE  Y    +
Sbjct: 122 LSDYEVSEYRDLEDPSIYVKFKIKGEENRYLLIWT 156


>gi|255712455|ref|XP_002552510.1| KLTH0C06534p [Lachancea thermotolerans]
 gi|238933889|emb|CAR22072.1| KLTH0C06534p [Lachancea thermotolerans]
          Length = 1072

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 103/269 (38%), Gaps = 11/269 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +   ++  Y         +  PA+    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYSSQHYPFENKDKFKQRVPANFISEGLDQTRGWFYTLGVLGTQLFG 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            +P    +     +   G+K+SKSL N  DP  V+ + G DALR +L+       +   +
Sbjct: 583 EVPYQNVIVCGIVLAADGKKMSKSLKNYPDPNLVLNKYGADALRLYLINSPVLKAESLKF 642

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMI-PTPGAFTESDESILSVCSR 396
            ++G+K+ ++  L     +        ++     + D    P   +    D  IL+    
Sbjct: 643 KEEGVKEVISKVLLPWWNSFKFLEGQIALLKKTSNVDFKYDPNLKSDNVMDRWILASLQT 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +++ I   M++  ++  + +++  + ++ + Y    +     +         L    + +
Sbjct: 703 LVKNIHSEMESYKLYAVVPRLLDFIDQLTNWYIRLNRRRLKGENGEQDCLKALNSLFDAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADE 482
                 +  F P L++ I+  +  F+ +E
Sbjct: 763 FAFVRAMAPFTPFLSDNIYQRMKSFIPEE 791



 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK-AAQNAGVTTKV 71
             +    PH GH     + DV+ R+  ++G  V    G D HG  I     +  G+T K 
Sbjct: 46  PPFATGTPHYGHILTSTVKDVVPRYATMNGYHVERRFGWDTHGLPIEHIIDKKLGITCKE 105

Query: 72  ----------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                            V   +  +R     +   I +D+  +T      ++    +K++
Sbjct: 106 DVYKMGIDKYNDECRAIVMMYANEWRKTIGRVGRWIDFDNDYKTMYPSFMESTWWAFKQL 165

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            D+  +Y+G     YS       ++ E  +   
Sbjct: 166 FDRDQVYRGYRVMPYSTGCTTPLSNFEAQQNYK 198


>gi|229582150|ref|YP_002840549.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012866|gb|ACP48627.1| valyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 842

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 128/325 (39%), Gaps = 28/325 (8%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
            +      +     E  LPI+         K  L  L L   T             +  V
Sbjct: 452 PFWYCENGHLTPAREKDLPIDPIKTNPPSEKCQLCGLHLKPVT------------DVADV 499

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPK 288
           WID+    L  T + ++ +    K +PA L + G DI+R    Y  +   +L+ N+P   
Sbjct: 500 WIDSSVTVLFLTKFYEDKNV-FNKTFPASLRLQGTDIIRTWLFYTFFRTLMLANNIPFTT 558

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G ++SKS GNV+ P++ ++E G DA+R  L+ + + G D  +  D +K 
Sbjct: 559 VLIHGQVLGPDGTRMSKSKGNVVSPLDRVDEFGADAIRMALL-DASIGDDFPFKWDIVKG 617

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
           +    L   + N        I    +  +  P +    D+ IL    + + +     +N 
Sbjct: 618 K--RMLLQKLWNASRLVYPFIA---NQRLDKPESLHIVDKWILQEHKKFVMKAINAYKNY 672

Query: 409 LIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
             +  L ++ S   E   D Y +  K   L + +     +  Y    +IR + ILL    
Sbjct: 673 DFYLVLQELYSYFWEIIADEYLEMIKH-RLFEDD----KSAKYTIQRIIRDIIILLHPIA 727

Query: 467 PKLANKIFDILFVADENRCFQSLDQ 491
           P +  +I+  LF   ++   + L +
Sbjct: 728 PHITEEIYSRLFGYKKSILLEELPK 752



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +  +  I T   + + + H+GHAY + IAD + RF RL+G +VL   G D  G       
Sbjct: 75  KSPRFVIDTPPPFTSGELHMGHAYWVTIADTMGRFKRLEGYNVLLPQGWDTQGLPTELKV 134

Query: 63  QNAGVTTK-----------VFVDQNSRNFRDMADVLDI--SYDDF-IRTTEKRHHDTCRI 108
           Q      K            + +   +  ++    L     ++ F  +T E ++    + 
Sbjct: 135 QYRLGIPKDNRQLFLQKCIEWTEDMIKKMKEAMIRLGYRPEWERFEYKTYEPKYRKIIQK 194

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +     I        +  + E      EV  
Sbjct: 195 SLIDMYKTNLIEMREGPVIWCPKCETALAQSEVGY 229


>gi|227510587|ref|ZP_03940636.1| leucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190239|gb|EEI70306.1| leucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 811

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 9/189 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K Y+     YP+ Q  H+GH       D++AR  R+ G +VL   G D  G    +
Sbjct: 33  TSKDKYYVLDMFPYPSGQGLHVGHPEGYTATDIMARMARMQGKNVLHPMGWDAFGLPAEQ 92

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   + F  QN + F+     L  SY  D  I TT+  ++   + +++++  KG 
Sbjct: 93  YALKTGHNPRSFTAQNIKTFKRQIRSLGFSYDWDREINTTDPAYYKWTQWIFEQLYKKGL 152

Query: 119 IYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKL 176
            Y+      +           ++EV  G           PV  +    +  +++AY D+L
Sbjct: 153 AYEDNIEVNWAPDFMGGTVVANEEVVDGKT----ERGGYPVYRVPMRQWVLKITAYADRL 208

Query: 177 LSYYESHPE 185
           +   ++   
Sbjct: 209 IDDLDTVDW 217



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 136/411 (33%), Gaps = 61/411 (14%)

Query: 98  TEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADGQYY 150
            + R ++  +     I      GD+    Y+G     +  + +    +D +    D    
Sbjct: 349 HDDRDYEFAKKFGLPIVPVIEGGDVADAAYTGDGPHFNSGFMDGMNKEDAIKAAIDWLKD 408

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEVISF 199
           +             + F    Y  + +                     LP  +  +    
Sbjct: 409 HDAGKEKVNYRLRDWIFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPKAKDIQTSGG 468

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI---DALTNYLTTTGYLDNPDGSKAKFW 256
            +S L +L+      D   +        M  W         Y+         D  K K+W
Sbjct: 469 KESPLANLTDWVNVVDKNGRKGKRETNTMPQWAGSSWYWLRYIDPHNDHAIADPEKLKYW 528

Query: 257 -PADLHVIGKDILRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSL 307
            P DL+V G +    H +Y   +              P  K V     +    EK+SKS 
Sbjct: 529 SPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTPEPFQKLVNQGMILGTNHEKMSKSK 588

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNVI+P ++++E G D LR + +          +  +G+         NG  + + R   
Sbjct: 589 GNVINPDDIVDEYGADTLRVYEMFMGPIDAAKPWSTEGI---------NGAHHWLDRVWR 639

Query: 368 MILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY 427
           +++ D + +       T +D  +  V ++ ++ +  +  +   +  ++Q++  V++  + 
Sbjct: 640 LMIDDNNHLRDR--VTTINDGHLDKVYNQTVKIVTNDFAHMRFNVGISQMMVFVNDAYK- 696

Query: 428 FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                                 + ++ +     +L    P +A +++++L 
Sbjct: 697 -------------------ADALPIQYMEGFVKMLSPLAPHIAEELWNLLG 728


>gi|326927783|ref|XP_003210068.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 1265

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 93/275 (33%), Gaps = 12/275 (4%)

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
             G  +      +   W ++ +       Y           +PAD    G D     F+ 
Sbjct: 511 RCGKGVLHRVPEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYT 570

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +   +  L    P    + +   +   G+K+SK   N  DP+ ++   G DALR +L+  
Sbjct: 571 LLVLSTALFGGPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMAIVNSYGADALRLYLINS 630

Query: 333 IACG-KDGFYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYD-----GMIPTPGAF 383
                ++  + ++G++  +        N    LV     +  KD              + 
Sbjct: 631 PVVRAENLRFKEEGVRDVLKDVFLPWYNAYRFLVQNVHILQHKDEGREFLYNENTVKESN 690

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPD 442
              D+ ILS    ++Q  +  M    ++  + +++  V    + Y    +     +   +
Sbjct: 691 NIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGTE 750

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                L     V+  +  L+  + P +   ++  L
Sbjct: 751 DCIMALETLFSVLFSMCRLMAPYTPFITELMYQNL 785



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 36  KNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRH 102
                        A +    + +Q        +   +         I +++  +T     
Sbjct: 96  IDKTLGIKGPEDVAKMGIAEYNNQCRGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|319760182|ref|YP_004124120.1| valyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318038896|gb|ADV33446.1| valyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 964

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/431 (16%), Positives = 131/431 (30%), Gaps = 90/431 (20%)

Query: 125 SGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP 184
           +   S  ++    +   +      Y N     V+ M    ++ + +    +  +  E   
Sbjct: 350 TMITSTCNQLNLIEQIQHYDVTIAYNNRTGTIVEPMLTNQWYLKTTYLAKQAKNIVEKGS 409

Query: 185 EFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDD------------------- 223
              +P + +N    ++   ++D  +SR+   WG  I    D                   
Sbjct: 410 IEFIPEQYKNIYFKWMD-NIQDWCISRQ-IWWGHQIPAWYDNTNKIYVGHCEKDIRKNYK 467

Query: 224 ---------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY 274
                       ++  W  +     +  G+  N +  K    P D+ V G DI+ F    
Sbjct: 468 LHHDTKLRQDHDVLDTWFSSSLWTFSNLGWPKNNNLLKFYH-PTDIIVSGFDIIFFWISR 526

Query: 275 WPAFLLSA--------NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE------- 319
                +           +P  K   +       G+K+SKS  NVI+PI++I+        
Sbjct: 527 MIMMTMYFIKDDKKNCQIPFKKIYITGLVRDKFGQKMSKSKNNVINPIDIIDRISIHTLS 586

Query: 320 ----------------------------------VGVDALRYFLVREIACGKDGFYDKDG 345
                                              G D+LR  L    + G+D  +D + 
Sbjct: 587 KNHINNNYDSSQTIKKPPYNKNTPKKNCVNEIITYGADSLRMTLAALSSYGRDIHWDINR 646

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQEIR 402
           L    N    N + N VS+ + +   + D           F+  D  I S   + +Q   
Sbjct: 647 LIGYHN--FCNKLWN-VSKFILLHTTNQDCGINYQQDKLLFSLPDRWITSKLHQTIQIFY 703

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
           + +      + +  +   +     D Y +  KP     TN  +     Y  +     L  
Sbjct: 704 QELHKYRFDKIINLLYEFIWHQFCDWYIEFIKPTLYCSTNTQKLIGTRYTLITSFETLLR 763

Query: 461 LLQAFVPKLAN 471
           L    +P +  
Sbjct: 764 LSHPIIPFITE 774



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 23/185 (12%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E+ +  I           H+GHA++  I D+LAR++R++G +VL+  G D  G       
Sbjct: 33  EKPRYCIMMPPPNITGALHLGHAFQQTIMDILARYNRMNGKNVLWRIGLDHAGIAAQILI 92

Query: 63  QN--------------------AGVTTKVFVDQ-NSRNFRDMADVLDISYDDFIRTTEKR 101
           +N                       + K   ++  +   + + + +  +   F  T + +
Sbjct: 93  ENKIFNQTKTPKNNDLKNSLLKEIWSWKEQTEKLINYQIKRLGNSVSWTNTRF--TMDPQ 150

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                +  + ++     IYKG     +  + +   +D EV               ++   
Sbjct: 151 MSFAVKEAFIRLYQDNLIYKGKRLVNWDYKIQTAISDLEVSYKQVKGLMWYIRYKLEEYS 210

Query: 162 EEGYF 166
           +    
Sbjct: 211 KSNNH 215


>gi|167580110|ref|ZP_02372984.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 945

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAKDALPAEQWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  + P   +  +       V + L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTSAPASKARRSAQTALYHVTQGLL 780

Query: 460 ILLQAFVPKLANKIF 474
            +L  F+   A + +
Sbjct: 781 RVLAPFLSFTAEEAW 795



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDMVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + +  +T   ++       
Sbjct: 114 IEKQFGKSLPAAEVMAKARAYATEQIEKQKAGFKRLGVLGEWGNPYKTMNFQNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|227114256|ref|ZP_03827912.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 921

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 16/257 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + + +         G       AD+++ G D     F +    +  +    P
Sbjct: 515 LDVWFDSGSTHASVVDVRPEFGGHA-----ADMYLEGSDQHRGWFMSSLMISTAIKGKAP 569

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN + P +V+ ++G D LR ++      G+    D+  
Sbjct: 570 YRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWIGSTDYSGEIAVSDE-- 627

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
              + +AD    I N   R +   L  +D       P      D   +       +EI E
Sbjct: 628 -ILKRSADAYRRIRNTA-RFLLANLNGFDPQKDSVKPEDMVVLDRWAVGCAKAAQEEILE 685

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
             ++   HR + +++   S      Y D  K  +   K++     +       +   L  
Sbjct: 686 AYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAKSDSVARRSCQTALYHISEALVR 745

Query: 461 LLQAFVPKLANKIFDIL 477
            +   +   A++I+  L
Sbjct: 746 WMAPIMSFTADEIWSYL 762



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 30  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 90  VEQLIGKPGEKVSAAEFRAECRKYAAEQVAGQKADFIRLGVLGDWDRPYLTMDFKTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 150 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 186


>gi|84029519|sp|Q74JX6|SYI_LACJO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 928

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 111/281 (39%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FRKETDILDVWFDSGSS------WAGVMQERDGLGFPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 572 AVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADT-TSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
               +D L++   +         +  ++  +L +     P   A      +  D+ +   
Sbjct: 631 VAVSQDILRQSAES------YRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +R+++E  E       +    +V S +       Y D  K    +   + +   ++  V
Sbjct: 685 LNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTV 744

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +V+ +L  L+   +P    +++  L   ++     ++ +
Sbjct: 745 IYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLANMPE 785



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 45  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F ++  +        L +   +D    T + +      
Sbjct: 105 LAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDHPYITLQPKFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++  KG IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH 201


>gi|329667549|gb|AEB93497.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 928

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 111/281 (39%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FRKETDILDVWFDSGSS------WAGVMQERDGLGFPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 572 AVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADT-TSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
               +D L++   +         +  ++  +L +     P   A      +  D+ +   
Sbjct: 631 VAVSQDILRQSAES------YRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +R+++E  E       +    +V S +       Y D  K    +   + +   ++  V
Sbjct: 685 LNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTV 744

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +V+ +L  L+   +P    +++  L   ++     ++ +
Sbjct: 745 IYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLANMPE 785



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 45  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F ++  +        L +   +D    T + +      
Sbjct: 105 LAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDHPYITLQPKFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++  KG IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH 201


>gi|315634925|ref|ZP_07890207.1| isoleucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476477|gb|EFU67227.1| isoleucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 940

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 71/441 (16%), Positives = 146/441 (33%), Gaps = 56/441 (12%)

Query: 89  ISYD-DFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYN 137
           +S D  FI TTE          +       +++ +   + K  +S  +  R +    +  
Sbjct: 358 VSNDGKFISTTEFFAGKGVFEANPLVVEKLQEVGNLLKVEKIKHSYPHCWRHKTPIIFRA 417

Query: 138 DDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--E 191
             + + G + Q    Q       V+W+ + G        +++          + +P+   
Sbjct: 418 TPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPMTLF 477

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDW-GIKIPDDPQY----------------IMYVWIDA 234
              E        L+ L    K  +  GI+   D                    + VW D+
Sbjct: 478 VHKETEELHPRTLELLEEVAKRVEKAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDS 537

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
            + Y +        +G        D+++ G D     F +    +       P  + +  
Sbjct: 538 GSTYSSVVANRPEFNGQDI-----DMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTH 592

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  + KR   
Sbjct: 593 GFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE--ILKR--- 647

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQEIRENMQN 407
             A      +  +   +L + +G  P   A         D   ++       EI++   N
Sbjct: 648 --AADSYRRIRNTARFLLANLNGFDPQRDAVKPEDMMSLDRWAVACALEAQNEIKDAYDN 705

Query: 408 QLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQA 464
              H  + +++   S      Y D  K  +   K +     +       +   L   +  
Sbjct: 706 YQFHAVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAP 765

Query: 465 FVPKLANKIFDILFVADENRC 485
            +   A++++  L      R 
Sbjct: 766 ILSFTADEVWGYLPQTATTRA 786



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 46  KCKKSFILHDGPPYANGNIHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 106 VEGLVGKPNEKISAAEFRAKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP-VQWMEEEGY 165
                K+   G +YKG     + L   +   + EV              P V  +E E  
Sbjct: 166 IRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAVSAVEIEEK 225

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F  +     KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 226 FNAVGKGHGKLSAVIWTTTPWTMPSNRAIAVNADLEYQLVQLGDER 271


>gi|238619860|ref|YP_002914686.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238380930|gb|ACR42018.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323477475|gb|ADX82713.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 980

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 17/371 (4%)

Query: 131 RDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +DE     + V    D      +     ++        F  +     +     +      
Sbjct: 353 KDEMLKEIENVNWIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICEKCNNVIVVGS 412

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLD 246
             +  +  I  V + L    +            +      +  VW D+   +  + G   
Sbjct: 413 REDLESIAIDSVPNDLHRPWIDNVRVKCNKCGGVAKRIADVADVWFDSGVAFFASLGKDW 472

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P DL + G D L   F ++     +L    P    +     +  +G ++ 
Sbjct: 473 QEKWKELG--PVDLVLEGHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGFMLDEQGREMH 530

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN ++P  VI+  G D LR +L+R     +D  +    L +    DL       V  
Sbjct: 531 KSLGNYVEPSVVIQRYGRDILRLWLLRNTT-WEDARFSWRAL-ELTKRDLQIIWNTYVFA 588

Query: 365 SVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           S+ M L +++ +  T           D  ILS  + +L+++ E+M+N  +H     +I+ 
Sbjct: 589 SMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSMLKKVNESMKNYKVHEMANYLINF 648

Query: 421 -VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V +V R Y    +     + N      + Y+   +++Q  IL    +P ++ KI+    
Sbjct: 649 LVEDVSRFYIRLIRKRAWIEANTQDKIAMYYILYFILKQWIILASTIIPFISEKIYKSFV 708

Query: 479 V-ADENRCFQS 488
           V   E+   +S
Sbjct: 709 VNPKESVSMES 719



 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 20/155 (12%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAA------------------QNAGVTTKVFVDQNS 77
           R+ RL G  V    G D HG  I  A                   +N     K F   N+
Sbjct: 2   RYERLLGKKVHDQPGYDTHGLPIEVATERLLGILNKQEIIDKIGVENFINKCKEFALSNA 61

Query: 78  RNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
                    + +   ++    T +  +  +   + KK  +KG + KG     +  R E  
Sbjct: 62  TKMTQNFKDVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETT 121

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
            +D EV +  D +  +         EE  Y    +
Sbjct: 122 LSDYEVSEYRDLEDPSIYVKFKIKGEENRYLLIWT 156


>gi|237751326|ref|ZP_04581806.1| valyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372692|gb|EEO23083.1| valyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 926

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/407 (16%), Positives = 131/407 (32%), Gaps = 63/407 (15%)

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                N ++    + + F         +     +     P + +N         L+D  +
Sbjct: 372 CYRCGNIIEPYISKQW-FVSKDAAKGAIERVNQNETRFYPSQWKNN-YDAWMRDLRDWCI 429

Query: 210 SRKTFDWGIKIP---------------------------DDPQYIMYVWIDALTNYLTTT 242
           SR+   WG +IP                                ++  W  +     +T 
Sbjct: 430 SRQ-LWWGHRIPVFYCECGNEFASKDDNPICPKCGGKNITQDNDVLDTWFSSGLWTHSTL 488

Query: 243 GYLD--------NPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFS 292
           G+ +          +     F P  L + G DIL F    +   A +    +        
Sbjct: 489 GFGNGDFGKGELWQESDLKDFHPNSLLITGFDILFFWVARMLLSADINCKEIAFKDIYLH 548

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  KG+K+SKS GNVIDP+ +      D +R+ L      G+D    +  L+  +  
Sbjct: 549 ALVLDEKGQKMSKSKGNVIDPLNLCATFSPDVVRFSLAFLCVQGRDIRLSQKQLE--ITR 606

Query: 353 DLANGIGNLVSRSVSMILK-----DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
           +  N I N +S       +      ++         T     + S  +  ++E+R  + +
Sbjct: 607 NFTNKIINAMSFLELYAGQLRSEYRFNEKESLNEYKTPLGIYMKSRLNLAIKEVRNALDS 666

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
                  + +   +   + + D     E  K + +    +  + +E       LL   +P
Sbjct: 667 YRFDLYASILYRFLW--NEFCDIG--IECAKADKESVFELASILIES----MKLLHPLMP 718

Query: 468 KLANKIFDILFVAD------ENRC--FQSLDQRLKPGFMLHKTFDPI 506
            L+  +F  L   D      +NR    +S  +       L K F+ I
Sbjct: 719 FLSEYVFQRLLSRDIESGLKDNRSIMIESFPKDTTRNTALEKGFEII 765



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   I           HIGHA    + D++ R+ R+DG  VL+  G D  G      
Sbjct: 43  KDSKPFCIMMPPPNVTGVLHIGHALTFTLQDIITRYKRMDGFRVLWQPGLDHAGIATQNV 102

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHH 103
            +                        + +++     +    +  S  +     T +K   
Sbjct: 103 VEKKLLEQGIKKEDIGREAFIQKVWEWKEESGGKILEQMRTMGFSPAFKRTRFTMDKGLI 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
           +  +  +    +KG IY+G     +   D A  + +  Y+   G+ Y  ++   ++++ +
Sbjct: 163 NAVKETFCNWYEKGFIYRGERMINWCTHDGALSDIEVEYEENKGKLYYLRYYLSEYVDSK 222

Query: 164 GY 165
           G+
Sbjct: 223 GH 224


>gi|50122797|ref|YP_051964.1| isoleucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827008|sp|Q6D0C3|SYI_ERWCT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49613323|emb|CAG76774.1| isoleucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 937

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 132/399 (33%), Gaps = 42/399 (10%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGY 165
           K +    +  +  Y   +  +    +       V     G    +  +   VQW+ + G 
Sbjct: 390 KSMLLHVEKLQHSYPCCWRHKSPIIFRATPQWFVSMDQKGLRKQSLSEIKDVQWIPDWGQ 449

Query: 166 FFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               +   ++          + +P+     +  E +    + L +    R     GI+  
Sbjct: 450 ARIEAMVANRPDWCISRQRTWGVPMSLFVHKETEELHPRTAELIEAVAKRVE-ADGIQAW 508

Query: 222 DDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            D                    + VW D+ + + +         G +     AD+++ G 
Sbjct: 509 WDLDPADVLGADADNYVKVPDTLDVWFDSGSTHASVVDVRPEFGGHE-----ADMYLEGS 563

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D
Sbjct: 564 DQHRGWFMSSLMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGAD 623

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPG 381
            LR ++      G+    D+     + +AD    I N   R +   L  +D       P 
Sbjct: 624 ILRLWIGSTDYSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPQKDSVKPE 679

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +        EI E  ++   HR + +++   S      Y D  K  +   K
Sbjct: 680 DMVVLDRWAVGCAKAAQDEILEAYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAK 739

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     +       +   L   +   +   A+++++ L
Sbjct: 740 GDSVARRSCQTALYHISEALVRWMAPIMSFTADELWNYL 778



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLIGKPGEKVSAAEFRAECRKYAAEQVAGQKADFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 166 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 202


>gi|323474747|gb|ADX85353.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 980

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 17/371 (4%)

Query: 131 RDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +DE     + V    D      +     ++        F  +     +     +      
Sbjct: 353 KDEMLKEIENVNWIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICEKCNNVIVVGS 412

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLD 246
             +  +  I  V + L    +            +      +  VW D+   +  + G   
Sbjct: 413 REDLESIAIDSVPNDLHRPWIDNVRVKCNKCGGVAKRIADVADVWFDSGVAFFASLGKDW 472

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P DL + G D L   F ++     +L    P    +     +  +G ++ 
Sbjct: 473 QEKWKELG--PVDLVLEGHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGFMLDEQGREMH 530

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN ++P  VI+  G D LR +L+R     +D  +    L +    DL       V  
Sbjct: 531 KSLGNYVEPSVVIQRYGRDILRLWLLRNTT-WEDARFSWRAL-ELTKRDLQIIWNTYVFA 588

Query: 365 SVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           S+ M L +++ +  T           D  ILS  + +L+++ E+M+N  +H     +I+ 
Sbjct: 589 SMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSMLKKVNESMKNYKVHEMANYLINF 648

Query: 421 -VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V +V R Y    +     + N      + Y+   +++Q  IL    +P ++ KI+    
Sbjct: 649 LVEDVSRFYIRLIRKRAWIEANTQDKIAMYYILYFILKQWIILASTIIPFISEKIYKSFV 708

Query: 479 V-ADENRCFQS 488
           V   E+   +S
Sbjct: 709 VNPKESVSMES 719



 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 20/155 (12%)

Query: 36  RFHRLDGLDVLFTTGTDEHGQKIAKAA------------------QNAGVTTKVFVDQNS 77
           R+ RL G  V    G D HG  I  A                   +N     K F   N+
Sbjct: 2   RYERLLGKKVHDQPGYDTHGLPIEVATERLLGILNKQEIIDKIGVENFINKCKEFALSNA 61

Query: 78  RNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAY 135
                    + +   ++    T +  +  +   + KK  +KG + KG     +  R E  
Sbjct: 62  TKMTQNFKDVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETT 121

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
            +D EV +  D +  +         EE  Y    +
Sbjct: 122 LSDYEVSEYRDLEDPSIYVKFKIKGEENRYLLIWT 156


>gi|271502098|ref|YP_003335124.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345653|gb|ACZ78418.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 941

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 131/394 (33%), Gaps = 42/394 (10%)

Query: 116 KGDIYKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLS 170
             +  +  Y   +  +    +       V    +G    +  +   VQW+ + G     S
Sbjct: 399 HHEKLQHSYPCCWRHKSPILFRATPQWFVSMDQNGLRKQSLSEIKGVQWIPDWGQARIES 458

Query: 171 AYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
              ++          + +P+     +  + +    + L +    R     GI+   D   
Sbjct: 459 MVANRPDWCISRQRTWGVPMSLFVHKETQELHPRTAELIEAVAKRVE-QDGIQAWWDLNP 517

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                            + VW D+ + + +         G       AD+++ G D    
Sbjct: 518 ADLMGAEAADYEKVPDTLDVWFDSGSTHASVVDVRPEFGGHA-----ADMYLEGSDQHRG 572

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +  +    P  + +     +  +G K+SKS+GN + P +V++++G D LR +
Sbjct: 573 WFMSSLMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLGADILRLW 632

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
           +      G+    D+     + +AD    I N   R +   L  +D  +    P      
Sbjct: 633 IGSTDYSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPALHSVKPEDMVVL 688

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +        EI E  ++   HR + +++   S      Y D  K  +   K +   
Sbjct: 689 DRWAVGCAKAAQDEIVEAYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAKHDSVA 748

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             +       +   L   +   +   A++I+  L
Sbjct: 749 RRSCQTALFHIAEALVRWMAPIMSFTADEIWGYL 782



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKAKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLVGKPGEKVSAAQFREECRKYAAEQVAGQKKDFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 166 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 202


>gi|227889764|ref|ZP_04007569.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849628|gb|EEJ59714.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 939

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 111/281 (39%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 529 FRKETDILDVWFDSGSS------WAGVMQERDGLGFPADLYLEGSDQYRGWFNSSLITSV 582

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 583 AVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADT-TSD 641

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
               +D L++   +         +  ++  +L +     P   A      +  D+ +   
Sbjct: 642 VAVSQDILRQSAES------YRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIK 695

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +R+++E  E       +    +V S +       Y D  K    +   + +   ++  V
Sbjct: 696 LNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTV 755

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +V+ +L  L+   +P    +++  L   ++     ++ +
Sbjct: 756 IYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLANMPE 796



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 56  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 115

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F ++  +        L +   +D    T + +      
Sbjct: 116 LAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDHPYITLQPKFEAEEI 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++  KG IYKG    ++S   E+   + EV   
Sbjct: 176 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH 212


>gi|145628101|ref|ZP_01783902.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979876|gb|EDJ89535.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 516

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 122/362 (33%), Gaps = 41/362 (11%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLS 210
           +   V+W+ + G        +++          + +P+      E        L+ L   
Sbjct: 13  EIKQVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPMTLFVHKETEELHPRTLELLEEV 72

Query: 211 RKTF-DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKA 253
            K     GI+   D                    + VW D+ + Y +        +G   
Sbjct: 73  AKRVERAGIQAWWDLDEKELLGADAETYRKVPDTLDVWFDSGSTYSSVVANRLEFNGQDI 132

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
                D+++ G D     F +    +   ++  P  + +     +  +G K+SKS+GN++
Sbjct: 133 -----DMYLEGSDQHRGWFMSSLMLSTATNSKAPYKQVLTHGFTVDGQGRKMSKSIGNIV 187

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P EV+++ G D LR ++      G+    D+  + KR     A      +  +   +L 
Sbjct: 188 TPQEVMDKFGGDILRLWVASTDYTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLA 240

Query: 372 DYDGMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           + +G  P      P      D   ++       EI++   N   H  + +++   S    
Sbjct: 241 NLNGFDPKRDLVKPEEMISLDRWAVACALDAQNEIKDAYDNYQFHTVVQRLMRFCSVEMG 300

Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             Y D  K  +   K +     +       +   L   +   +   A++I+  L   +  
Sbjct: 301 SFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTADEIWQHLPQTESA 360

Query: 484 RC 485
           R 
Sbjct: 361 RA 362


>gi|34763705|ref|ZP_00144628.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886533|gb|EAA23774.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 933

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 103/288 (35%), Gaps = 26/288 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++             K    PADL++ G D     FH     +   
Sbjct: 531 KETNIMDVWFDSGSSHRGVLEVW------KGLRRPADLYLEGSDQHRGWFHTSLLTSVAS 584

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           + + P    +        +G K+SKSLGN + P +VI+  G D LR +    +    D  
Sbjct: 585 TGDSPYKSVLTHGFVNDGEGRKMSKSLGNTVSPADVIKVYGADILRLWC-GSVDYRDDVR 643

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQ 399
              + +K+   ++    I N     +      +            E D+  L+    + +
Sbjct: 644 ISDNIVKQ--MSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKR 701

Query: 400 EIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIR 456
            + E+      +     +   + +     Y D  K     +K +         V  EV+ 
Sbjct: 702 NVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLM 761

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSL---------DQRLKP 495
            L  ++   +   A +I++ L  + E R  +S+         D+ LKP
Sbjct: 762 TLTKMVAPILSFTAEEIWESL--SAETREAESIFLADWYVNNDEYLKP 807



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA--------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + +  +     ++    L +   +D+   T + R    
Sbjct: 108 VVKEVGVSKAREMSALEIRQLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I + G I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIE-----YYDHVSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      +      GL  
Sbjct: 223 LLDKIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYK 263


>gi|322792797|gb|EFZ16630.1| hypothetical protein SINV_04230 [Solenopsis invicta]
          Length = 1249

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 119/400 (29%), Gaps = 35/400 (8%)

Query: 96  RTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           RT     +      +    +  +      K  Y     ++++ + N     +  +     
Sbjct: 444 RTDTPLIYKAVPSWFVKVEEIKNRLLVANKETYWVPDYIKEKRFGNWLRDARDWNISRNR 503

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              NP+     E                        L      +V    +  +  L  + 
Sbjct: 504 YWGNPIPLWISE-----------DKEEIVCVGSIAELEKLTGKKVTDIHRESIDHL--TI 550

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            +   G         +   W ++ +       +    +    K++PAD    G D     
Sbjct: 551 PSKRAGKPPLRRIPQVFDCWFESGSMPCAQRHFPFENNVDFNKWFPADFIGEGIDQTRGW 610

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F+ +   +  L    P    V +   +   G+K+SK   N  DP++V+ + G DALR +L
Sbjct: 611 FYTLLVISTALFGKAPYKNLVVNGLILASDGQKMSKRKKNYPDPMKVVNDYGADALRLYL 670

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT----- 384
           +       +        K+    D+   +      +   +L++      T   FT     
Sbjct: 671 INSPVVRAENL----KFKEEGIRDIVKDVILPWYNAFRFLLQNIQQYEKTEDVFTFDEKL 726

Query: 385 ------ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELK 437
                   D  I+S    +L  +++ M    ++  +  +I  +  + + Y    +     
Sbjct: 727 DFCSSNIMDRWIVSFTQSLLVFVKKEMTKYRLYTVVPYLIKYIDNLTNWYVRMNRKRIKG 786

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +         L      I  +      F P L   +F  L
Sbjct: 787 EDGLQDCKNALTTLFLAIYTMVKTYAPFTPFLTEFMFQRL 826



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 23/159 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R K        +    PH GH     I D++ R+    G  V    G D HG  +    
Sbjct: 82  QRPKYTFYDGPPFATGLPHYGHLLTGTIKDIVTRYAYQSGYHVDRRFGWDCHGLPVENEI 141

Query: 63  QN--AGVTTKV-------------------FVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
                    +                    +  +       M   +D   D   +T    
Sbjct: 142 DKKFEIKGPEDVEKMGIDKYNQECRNIVMRYAKEWEEIVGRMGRWIDFKNDY--KTMYPW 199

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + ++   +++++ +KG IY+G     YS       ++ E
Sbjct: 200 YMESIWWIFQQLYNKGLIYEGTKVMPYSTGCNTPLSNFE 238


>gi|293606194|ref|ZP_06688557.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292815341|gb|EFF74459.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 953

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 16/261 (6%)

Query: 228 MYVWIDALTNYLTT---TGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + VW D+ + + T                  WPADL++ G D     FH+      +L  
Sbjct: 544 LDVWFDSGSTHATVLGGKDGDFAGSHGAELGWPADLYLEGSDQHRGWFHSSLLTGCMLYG 603

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  +G K+SKS+GNVI P +V + +G + LR ++      G+     
Sbjct: 604 QPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGE-LSIS 662

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQE 400
            + LK+ V  +    I N + R +   + D+D +      G   E D   L++ +++  E
Sbjct: 663 DEILKRVV--EGYRRIRNTL-RFLLANVADFDAVSQAEPYGELFEIDRYALAMTAQMQSE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIR 456
           ++ N +    H A++++ +  SE     Y D  K   L  + PD  +  +     +++ +
Sbjct: 720 VQANYERYDFHPAVSRLQTFCSEDLGAFYLDILKD-RLYTSAPDSVARRSAQTALLDITQ 778

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  L+   +   A + +  L
Sbjct: 779 TLLKLMAPILSFTAEEAWKEL 799



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     R     L +   +D    T    +       
Sbjct: 105 IEKKYGKHLPVAEVQSKARAYALEQIDRQRKDFKRLGVLGEWDRPYMTMNFSNEADEIRA 164

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I DKG +++G     +     +   + EV  
Sbjct: 165 LGRILDKGYVFRGLKPVNWCFDCGSALAEAEVEY 198


>gi|257866932|ref|ZP_05646585.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257800988|gb|EEV29918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 767

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 7/189 (3%)

Query: 12  AIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
              YP+ Q  H+GH       D+L+RF R  G +VL   G D  G    + A + G    
Sbjct: 1   MFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYNVLHPMGWDAFGLPAEQYALDTGNDPA 60

Query: 71  VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            F  +N   FR   + L  SYD    I TT+  ++   + ++ K+ +KG  Y+      +
Sbjct: 61  EFTKKNIETFRRQINALGFSYDWNREINTTDPEYYKWTQWIFTKLYEKGLAYEAEVPVNW 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                    ++EV  G   +        V       +  +++AY D+LL   E       
Sbjct: 121 VPELGTVIANEEVIDGKSERGGYD----VIRKPMRQWMLKITAYADRLLDDLEEVDWPES 176

Query: 189 PIERRNEVI 197
             E +   I
Sbjct: 177 IKEMQRNWI 185



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 132/413 (31%), Gaps = 64/413 (15%)

Query: 98  TEKRHHDTCRILWK---KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQH 154
            ++R H+  +        +   G++ +  Y+      +  + +  +     +      + 
Sbjct: 304 HDERDHEFAKTFGLEIIPVLAGGNVEESAYTEDGLHINSDFLDGLDKETAIEKMVAWLEE 363

Query: 155 NPVQWME----EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           N V   E       + F    Y  + +            +      +   K+     S +
Sbjct: 364 NHVGKKEVSYRLRDWLFSRQRYWGEPIPIIHWEDGTTTTLPEDQLPLRLPKTDNIKPSGT 423

Query: 211 RKTFDWGIKIPDD------------PQYIMYVWIDALTNYLTTTGYLDNP----DGSKAK 254
            ++    +    +                M  W    + Y        N     D  K K
Sbjct: 424 GESPLANVTDWVNVTDPETGKKGRRETNTMPQWA-GSSWYFLRFIDPHNKSVLADYDKLK 482

Query: 255 FW-PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISK 305
            W P D+++ G +    H +Y   +         +    P  K       +    EK+SK
Sbjct: 483 RWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSK 542

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GNV++P +VI + G D LR + +          ++++GL+              + R 
Sbjct: 543 SRGNVVNPDDVINQYGADTLRLYEMFMGPLDASIAWNENGLEGS---------RKFLDRV 593

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
             +I+ +   M      F   D  +  V  + ++++ E+ +    + A++Q++  V+E  
Sbjct: 594 WRLIVDENGKMRDRITTFN--DGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMVFVNEAY 651

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           +                       +  E +     LL    P +  +++ IL 
Sbjct: 652 K--------------------ADALPYEYVEGFVQLLAPIAPHIGEELWSILG 684


>gi|238019859|ref|ZP_04600285.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
 gi|237863383|gb|EEP64673.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
          Length = 944

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 126/415 (30%), Gaps = 81/415 (19%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                +     NPV +   E +F  +  Y+ + L   ++  ++I               G
Sbjct: 411 RHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRG 470

Query: 204 LKDLSLSR---------------------------------------------------- 211
              +S  R                                                    
Sbjct: 471 DWVISRQRIWGVPIPIYYCESCGEHIINDDTIKALQEKVAVEGSDAWWAHSAKELLPEGF 530

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G         IM VW D+ +++                  P  +++ G D     
Sbjct: 531 KCPHCGHDEFKKETDIMDVWFDSGSSWAGVLEVNGLDV-------PCAMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A   +   P    +     +  +G K+SKS+GN + P ++I+  G D +R ++
Sbjct: 584 FNSSLLTAVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   D    KD +K+       + +   +  +   +L + D   P          +
Sbjct: 644 SSADYQA-DVRLSKDIVKQ------LSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYADMS 696

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTN 440
           E D+  L     V Q++ E  +N   H     + +   V     Y D  K   +   K N
Sbjct: 697 EFDKWALLRLEEVRQKVTEAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKNN 756

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
             R  +      E+++ L  ++   +   A +++  +   D   E+   Q   Q 
Sbjct: 757 VAR-RSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMPKEDGMPESVMLQDWPQG 810



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 65/205 (31%), Gaps = 17/205 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N + HIGHA    + D++ ++  + G    +  G D HG  I  A
Sbjct: 45  KDAKPFILHDGPPYANGKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K +  +     +       +   ++    T         
Sbjct: 105 VIKNTGLNRHEMAPLDLRNKCKEYALECVETQKQDFIRFGVLGEWERPYLTLRPEFEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ +++ +G IYKG  + ++    E    + E+       +      P  ++ E+   
Sbjct: 165 LGIFGEMAKRGHIYKGLKTVYWCTHCETALAEAEIEYAEKKSFSIYVKFP--YVSEKKVT 222

Query: 167 FRLSAYQDKLLSYYESHPEFILPIE 191
                   +  +   +   + +P  
Sbjct: 223 LPAGVDPKQAFAVIWTTTPWTMPAN 247


>gi|268319697|ref|YP_003293353.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262398072|emb|CAX67086.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 939

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 111/281 (39%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 529 FRKETDILDVWFDSGSS------WAGVMQERDGLGFPADLYLEGSDQYRGWFNSSLITSV 582

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 583 AVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADT-TSD 641

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
               +D L++   +         +  ++  +L +     P   A      +  D+ +   
Sbjct: 642 VAVSQDILRQSAES------YRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIK 695

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +R+++E  E       +    +V S +       Y D  K    +   + +   ++  V
Sbjct: 696 LNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTV 755

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +V+ +L  L+   +P    +++  L   ++     ++ +
Sbjct: 756 IYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLANMPE 796



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 56  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 115

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F ++  +        L +   +D    T + +      
Sbjct: 116 LAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDHPYITLQPKFEAEEI 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++  KG IYKG    ++S   E+   + EV   
Sbjct: 176 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH 212


>gi|262199048|ref|YP_003270257.1| isoleucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262082395|gb|ACY18364.1| isoleucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 1031

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 119/394 (30%), Gaps = 59/394 (14%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
                  +  +     +P+ +   + +F +++ Y+D +L    +     +P   R+    
Sbjct: 382 QHDTYEHNYPHCWRCDSPLIYRAVKSWFVKVTEYKDTMLRL--NQQINWIPSHIRDGRFG 439

Query: 199 FVKSGLKDLSLSRKTFDWGIKI-------------------------------------- 220
                 +D ++SR  F WG  +                                      
Sbjct: 440 MWLDNARDWAVSRARF-WGTPVPVWRCEGCEENAVIGSVEELETRSGQTVEDLHRPAIDE 498

Query: 221 -----------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI--GKDI 267
                          + ++  W ++     +   Y           +P D  V    +  
Sbjct: 499 VTMPCESCGGTMRRIEDVLDCWFESGAMPHSQLHYPFENRERFEDNYPGDFIVEYVAQTR 558

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   A  L    P    V     +   G K+SK L N  DP+E++ E G DALR 
Sbjct: 559 GWFYTLVALASGLFEKEPFRNVVCHGVLLAEDGRKMSKRLRNYPDPMELVSEYGSDALRI 618

Query: 328 FLVREIACG-KDGFYDKDGLKKRVNADLAN-GIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
            L+        D  +    +       L N  + N +    +    D         + + 
Sbjct: 619 GLLSSAVVRGTDARFS--RVAVHDAVRLINLPLWNSLHFFTAYASIDGFVPSGEIDSPSL 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD-RYFDAQKPWELKKTNPDRA 444
            D  +LS    +   I E M+      A   +   V+ +   Y    +     +      
Sbjct: 677 LDRYMLSETEALRAGIEERMEAYDFPGAYKLIFDYVNLLSTWYIRLVRRRMWGQGLEGEK 736

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            T+  V    +  LA +L  F P LA  +++ L 
Sbjct: 737 RTIYEVLYASLSTLAKVLAPFAPFLAENLYEALG 770



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 23/157 (14%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
                     +    PH GH     I DV+ R+  + G  V    G D HG  +    + 
Sbjct: 40  PHYVFYDGPPFATGLPHYGHIMTSYIKDVVPRYFTMRGYYVPRRWGWDCHGLPVEYEVEK 99

Query: 65  A---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHH 103
                                   T   +  +  R    +   +D  +D+  +T ++   
Sbjct: 100 DLGFKSRSDILAHGIGNFNEACRNTVLRYAGEWERIIHRLGRWVD--FDNAYKTMDRNFM 157

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           ++    +K++ ++G  Y+G     Y +R +   ++ E
Sbjct: 158 ESVLWSFKRLHERGFTYEGEKVVPYCMRCQTTLSNFE 194


>gi|317495329|ref|ZP_07953699.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914751|gb|EFV36227.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 910

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ T++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKEMDIMDVWFDSGTSHQGCCA------VRDDLTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + V +   +   G K+SKSLGNVI P +V +++G + +R +    +   +D
Sbjct: 572 AVSGVAPYKELVSAGFVMDGNGNKMSKSLGNVISPNDVGKQLGAEIIRLW-SASVDYTQD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIP--TPGAFTESDESILSVCS 395
                D LK+   ++    I N     +  +    +D            E D+ ++    
Sbjct: 631 VRISNDILKQV--SETYRKIRNTYRFLLGNLFNGSFDNRKDLVEYADLEELDKYMMIKFE 688

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WELKKTNPDRASTVLYVTV 452
           +V+  + +  +N   +   +++ +   V     Y D  K    ++  +  +  ++L V  
Sbjct: 689 KVVANVLDYYENYQFNSITSELTNFFNVELSSFYLDYGKDILYIEGEDSPKRRSMLTVLY 748

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVAD 481
            ++ +   L    +   A +I+D +   D
Sbjct: 749 TILSKSVRLFAPILSFTAEEIYDNMPYED 777



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 14/156 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGHA   I+ D + ++  ++G    +  G D HG  I +  
Sbjct: 47  GKPTYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIEQVL 106

Query: 63  QNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
            N GV              K +  +     R+    L +   +D+   T + +       
Sbjct: 107 VNNGVDRKSMPATKFRNKCKDYALKQVDKQREDFKKLGVIGDWDNPYLTLDPKFEAEQIR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           ++ K+ DKG IYKG    ++S   E+   + E+   
Sbjct: 167 VFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYR 202


>gi|182419097|ref|ZP_02950351.1| leucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669189|ref|ZP_04529171.1| leucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377052|gb|EDT74622.1| leucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655076|gb|EEP52634.1| leucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 816

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  Q H GH +     D  ARF R+ G +V    G D  G      A 
Sbjct: 31  KKLYTLEMFSYPSGAQLHAGHWFNYGPTDSWARFKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+       +N          +    ++++ + T    ++   + L+ ++  KG  Y+
Sbjct: 91  KTGIHPHDSTLKNIETMEKQLKSMGAMFNWENEVVTCLPDYYKWTQWLFLQLYKKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V   +   +FF+++ Y D+LL   +
Sbjct: 151 KNAPVNWCPSCNTVLANEQVVDGE----CERCGSLVTKKDLTQWFFKITDYADELLDMID 206

Query: 182 SHPEFILPIERRNEVI--SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                      +   I  S+       +  S   FD      D    + YV
Sbjct: 207 DLDWPEKTKSMQKHWIGRSYGAQVNFKVKDSDLEFDVFTTRVDTLNGVTYV 257



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 97/298 (32%), Gaps = 35/298 (11%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA--- 253
           + F   G   L  S    +        P       +D             +     A   
Sbjct: 455 VEFTPDGKSPLGKSEDFINTTCPCCGKPAKREADTLDTFVCSSWYYLRYPDNKNEDAPFN 514

Query: 254 -----KFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKG 300
                K  P D +V G +    H +Y             L+ + P          +   G
Sbjct: 515 SELINKILPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFKSLTHQGLILGPDG 574

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN I P E I+E G D  R +L+   A  + G +  DG+K        +    
Sbjct: 575 LKMSKSKGNTISPDEYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIKS------VSKFIE 628

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R +    +  +           +++ +       ++ + E+      + A+A+++ L
Sbjct: 629 RIERILESCREVINSTENIKTTVDSAEKELNFWKHTAIKGVTEDTDKMQFNTAIARLMEL 688

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            + +++Y          K NP+          E I     LL  F P  A + ++ L 
Sbjct: 689 TNALNKYLHEN-----VK-NPE-------FLKETITDYIKLLAPFAPHFAEEQWNQLG 733


>gi|42518905|ref|NP_964835.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583191|gb|AAS08801.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 935

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 111/281 (39%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 525 FRKETDILDVWFDSGSS------WAGVMQERDGLGFPADLYLEGSDQYRGWFNSSLITSV 578

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 579 AVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADT-TSD 637

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
               +D L++   +         +  ++  +L +     P   A      +  D+ +   
Sbjct: 638 VAVSQDILRQSAES------YRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIK 691

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKP-WELKKTNPDRASTVLYV 450
            +R+++E  E       +    +V S +       Y D  K    +   + +   ++  V
Sbjct: 692 LNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTV 751

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +V+ +L  L+   +P    +++  L   ++     ++ +
Sbjct: 752 IYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLANMPE 792



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 52  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 111

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F ++  +        L +   +D    T + +      
Sbjct: 112 LAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDHPYITLQPKFEAEEI 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++  KG IYKG    ++S   E+   + EV   
Sbjct: 172 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH 208


>gi|116200191|ref|XP_001225907.1| hypothetical protein CHGG_08251 [Chaetomium globosum CBS 148.51]
 gi|88179530|gb|EAQ86998.1| hypothetical protein CHGG_08251 [Chaetomium globosum CBS 148.51]
          Length = 1078

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 147/448 (32%), Gaps = 34/448 (7%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMAD-----VLDISYDDFIRTTEKRHHDT 105
            D+ G+  +K +  AG+  K       +  ++         L  SY    R+     +  
Sbjct: 348 VDDTGRFTSKVSDFAGMGVKEADKHIIKYLKNSGRLVVESQLKHSYPMCYRSDTPLIYKA 407

Query: 106 CRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               +    + I    +  +G +     ++++ + +     +  +         P+    
Sbjct: 408 VPSWFVRIPEIIPQMLENIEGSHWVPSFVKEKRFASWISNARDWNVSRNRYWGTPIPLWV 467

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
            +    R+       L     +   I  + R       + S     +L R          
Sbjct: 468 SDDLEERVCIGSIAELKELSGYEGEITDLHRDKIDHITIPSKKGKGTLRRI--------- 518

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFL 279
              + +   W ++ +    +  Y         K +P D    G D     F+ +      
Sbjct: 519 ---EEVFDCWFESGSMPYASKHYPFENREEFEKSFPGDFIAEGLDQTRGWFYTLLVLGTH 575

Query: 280 LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KD 338
           L    P    V +   +   G+K+SK L N  DP  V+ E G DALR +L+       + 
Sbjct: 576 LFGVSPFKNCVVNGIVLAENGKKMSKRLQNYPDPNIVMSEYGSDALRLYLINSPVVRAEP 635

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMIL-----KDYDGMIPTPGAFTE---SDESI 390
             + + G+K+ V   L   + N        +      ++ D    +    +     D+ I
Sbjct: 636 LRFKESGVKEVVAKVLLP-LWNSYKFFEGQVNLLKKVENVDYRFDSSMETSNTNVMDKWI 694

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLY 449
           L+ C  +L+ + E M    ++  + +++ L+    + Y    +     +   D     L 
Sbjct: 695 LASCQSLLKFVNEEMAAYRLYTVVPKLLELIDNTTNWYIRFNRKRLKGENGLDDTLHALN 754

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
              EV+  L   L  F P L   I+  L
Sbjct: 755 TLFEVLFTLCRGLAPFTPFLTETIYLRL 782



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 19/146 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K            +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGNPNYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGFHVERRFGWDTHGLPIEHE 89

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  +R   + L   I +D+  +T +   
Sbjct: 90  IDKKLHISGKAAVMEMGLEKYNAECRAIVMRYSEEWRHTIERLGRWIDFDNDYKTMDPTF 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWY 128
            +T   ++K++ DKG +Y+G     Y
Sbjct: 150 METEWWVFKQLFDKGQVYQGHRVMPY 175


>gi|282849351|ref|ZP_06258736.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581055|gb|EFB86453.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 944

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/414 (14%), Positives = 126/414 (30%), Gaps = 79/414 (19%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                +     NPV +   E +F  +  Y+ + L   ++  ++I               G
Sbjct: 411 RHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRG 470

Query: 204 LKDLSLSR---------------------------------------------------- 211
              +S  R                                                    
Sbjct: 471 DWVISRQRIWGVPIPIYYCESCGEHIINDDTIKALQEKVAVEGSDAWWAHSAKELLPEGF 530

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G         IM VW D+ +++       D          P  +++ G D     
Sbjct: 531 KCPHCGHDEFKKETDIMDVWFDSGSSWAGVLEVNDLDV-------PCAMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A   +   P    +     +  +G K+SKS+GN + P ++I+  G D +R ++
Sbjct: 584 FNSSLLTAVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   D    KD +K+       + +   +  +   +L + D   P          +
Sbjct: 644 SSADYQA-DVRLSKDIVKQ------LSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYADMS 696

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD 442
           E D+  L     V Q++ +  +N   H     + +   V     Y D  K     ++  +
Sbjct: 697 EFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKDN 756

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
               +      E+++ L  ++   +   A +++  +   +   E+   Q   Q 
Sbjct: 757 VARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMPKEEGMRESVMLQDWPQG 810



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 17/205 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N + HIGHA    + D++ ++  + G    +  G D HG  I  A
Sbjct: 45  KDAKPFILHDGPPYANGKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K +  +     +       +   +D    T         
Sbjct: 105 VIKNTGLNRHEMAPLDLRNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ +++ +G IYKG  + ++    E    + E+       +      P  ++ E+   
Sbjct: 165 LGIFGEMAKRGHIYKGLKTVYWCTHCETALAEAEIEYAEKKSFSIYVKFP--YVSEKKVT 222

Query: 167 FRLSAYQDKLLSYYESHPEFILPIE 191
                   +  S   +   + +P  
Sbjct: 223 LPAGVDPKQAYSVIWTTTPWTMPAN 247


>gi|255025946|ref|ZP_05297932.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 921

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ ++  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMMIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|302842510|ref|XP_002952798.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
 gi|300261838|gb|EFJ46048.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
          Length = 1034

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 73/421 (17%), Positives = 128/421 (30%), Gaps = 43/421 (10%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +D        YD   RT +          +  +            G   +          
Sbjct: 437 KDELYEHKYPYDW--RTKKPTIFRATSQWFASVEGFRGAALEAIRGVQWIPAAGLNRITG 494

Query: 141 VYKGADGQYYNAQHN-----PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           + +G      + Q       PV +  E       S   + +      +          +E
Sbjct: 495 MTEGRSDWCISRQRKWGVPIPVFYDTETDEPLLTSETIEHITGLVSQYGSDCWWTLSVSE 554

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           ++      L                    +  M VW D+ +++           G     
Sbjct: 555 LLPPSLRHLAPRLRR-------------GEDTMDVWFDSGSSWAGVLQADAVWAGL---S 598

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +PADL++ G D     F +    +   +   P  + +     +  KG+K+SKSLGNV+DP
Sbjct: 599 YPADLYLEGSDQHRGWFQSSLLTSVAANGIAPYKQVLTHGFVLDEKGQKMSKSLGNVVDP 658

Query: 314 IEV---------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
             V             G D LR ++   +    D       L  R  AD+   +   + R
Sbjct: 659 RVVIEGGKDVKQQPAYGADVLRLWVA-SVDYTSDVAIGSSIL--RQMADMYRKVRGTL-R 714

Query: 365 SVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-- 420
            +   L DYD  +           D  +L   S+++ E+     +    +    +     
Sbjct: 715 FLLGNLADYDPQVHAVPYEQLPSLDRYMLFRVSQLMNEVSAAYDSYQFFKVFQSLQRFVI 774

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEV-IRQLAILLQAFVPKLANKIFDILFV 479
           V   + Y D  K     + + D A       ++  +R L   L   VP LA   +  L  
Sbjct: 775 VDLSNFYLDTAKDRLYIRRDSDPARRACQTVLDALLRSLMAALAPLVPHLAEDAWLNLPY 834

Query: 480 A 480
           A
Sbjct: 835 A 835



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 46/155 (29%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA--- 61
           E   +     Y N   HIGHA   I+ D + R+  L G    F  G D HG  I      
Sbjct: 124 ESYTLHDGPPYANGDLHIGHALNKILKDFINRYQLLQGRRAKFVPGWDTHGLPIELKVLQ 183

Query: 62  -----------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                              + F  +     R       +   +     T E  +      
Sbjct: 184 SLKEKERKELGVLELRAKAREFALRTIDAQRTQFKRYGVWGDWSSPYVTLEPSYEAAQLR 243

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ K+   G IY+G     +S        + E+  
Sbjct: 244 VFGKMFLNGHIYRGLKPVHWSPSSRTALAEAELEY 278


>gi|257877587|ref|ZP_05657240.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811753|gb|EEV40573.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 929

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 24/271 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++                 +PAD+++ G D     F++    +  +
Sbjct: 516 KETDIMDVWFDSGSSHEAVLRQRP------ELTFPADMYLEGSDQYRGWFNSSITTSVAI 569

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D  
Sbjct: 570 NGVAPYKAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV-SSVDYEADVR 628

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCS 395
              D L      +  + +   +  ++  +L + +   P   +         D+ ++   +
Sbjct: 629 VSMDIL------NQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFENLRSVDKYMMVRLN 682

Query: 396 RVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVT 451
           + ++ IRE+  +          VI+   V     Y D  K     +   D +   +  V 
Sbjct: 683 QTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEAENDFQRRAMQTVF 742

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +    L  LL   +P  A +I+  L   +E
Sbjct: 743 YQTAVALTKLLTPIIPHTAEEIWSHLKEEEE 773



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPTFVLHDGPPYANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQV 102

Query: 62  AQNA------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
             N                 + +        R     L +S D      T    +     
Sbjct: 103 LTNKGIKRKEMSLAEYRKKCEEYALTQVDTQRADFKRLGVSGDWEHPYITLTPDYEAAEI 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K+++KG IYKG    ++S   E+   + E+              PV
Sbjct: 163 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYKDVKSPSIYVAFPV 212


>gi|296876951|ref|ZP_06900995.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431986|gb|EFH17789.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 930

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 103/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+  +N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYENFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D    T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWDHPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|238924358|ref|YP_002937874.1| leucyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876033|gb|ACR75740.1| leucyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 804

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 67/198 (33%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 32  SKPKYYALDMFPYPSGVGLHAGHPEGYTATDIMSRMKRMQGYNVLHPMGYDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G     F  +N   F      L   YD    I T++   +   + ++KK+ + G  
Sbjct: 92  AVNTGHHPNGFTQKNIETFSKQLRELGFDYDWSKMISTSDPEFYKWTQWIFKKLYEAGYA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DEV  G           PV     + +     A+ +KLL  
Sbjct: 152 KHIDMPVNWCEELGTVLSNDEVIDGKS----ERGGYPVVRKNMKQWVIDQPAFAEKLLEG 207

Query: 180 YESHPEFILPIERRNEVI 197
                      E +   I
Sbjct: 208 LNEIDWPESTKEMQRNWI 225



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 51/264 (19%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFLLSA---- 282
            A +++        + D   A     K W P DL+V G +    H +Y   +        
Sbjct: 500 SAGSSWYYMRYIDPHNDKEFANQELLKHWMPVDLYVGGPEHAVGHLMYSRIWNRFLFDQG 559

Query: 283 ----NLPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRYFLVREIACGK 337
                 P  K V     +   G K+ K     V++P +V+EE G D LR + +       
Sbjct: 560 LSPVKEPFKKLVHQGMILGSNGIKMGKRFPEFVVNPSDVVEEYGADTLRLYEMFMGPLEV 619

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              ++   ++         G    ++R  +   +             E D  +  +  + 
Sbjct: 620 SKPWNDSNVQ---------GAKRFITRVWNFFTE-------PENIIEEDDGKLTRIYHQT 663

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++++  + +    + A++Q++  V+EV +                          E    
Sbjct: 664 VKKVTNDFEALGYNTAISQMMIFVNEVYK--------------------AGRCPREFAEG 703

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  +L    P +  +I+  +   D
Sbjct: 704 LIKMLSCVCPHVGEEIWQRMGHDD 727


>gi|238853976|ref|ZP_04644333.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833421|gb|EEQ25701.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 933

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 115/304 (37%), Gaps = 30/304 (9%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                +++    G K    P         I+ VW D+ ++      +           +P
Sbjct: 500 WYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSS------WAGVMKERDGLGFP 553

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F++    +  ++   P  + +     +  KG K+SKSLGNVI P +
Sbjct: 554 ADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPND 613

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI+++G + +R ++        D    +D L++   +         +  ++  +L +   
Sbjct: 614 VIKQMGAEIIRLWVAGADT-TSDVVVSQDILRQSAES------YRKIRNTMRFMLANTTD 666

Query: 376 MIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
             P          +  D+ +    +R+++E  E       +    +V S +       Y 
Sbjct: 667 FDPKQNSIAYPDMSGVDQYMEIKLNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYL 726

Query: 429 DAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           D  K        + +   ++  V  +V+ +L  L+   +P    +++  L   ++     
Sbjct: 727 DFAKDVLYIDPEDSETRRSMQTVIYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLA 786

Query: 488 SLDQ 491
           ++ +
Sbjct: 787 NMPE 790



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 45  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F  +  +        L +   +D    T + +      
Sbjct: 105 LAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDHPYITLQPKFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  KG IYKG    ++S   E+   + EV              P++
Sbjct: 165 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYHDIKSPRIYVAFPIE 215


>gi|58698342|ref|ZP_00373257.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630139|ref|YP_002726930.1| Isoleucyl-tRNA synthetase, class Ia [Wolbachia sp. wRi]
 gi|58535132|gb|EAL59216.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592120|gb|ACN95139.1| Isoleucyl-tRNA synthetase, class Ia [Wolbachia sp. wRi]
          Length = 1103

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 74/484 (15%), Positives = 146/484 (30%), Gaps = 30/484 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS-----Y 91
           F+     D+      D  G+  A+ +  AGV      D   +  +              Y
Sbjct: 373 FYLCQSHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKLKGQGSWFKTEQYIHNY 432

Query: 92  DDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT     + T    +    K  S   ++ K        +RD  +    E       
Sbjct: 433 PHCWRTDTPLIYRTMPSWYVAVTKFKSRMVELNKRVNWIPNHIRDGQFGKWLEGAHDWSI 492

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+   + +   +                    L  +   ++    +  +  L
Sbjct: 493 SRNRFWGTPIPVWKSDDARYPRVD---------VYGSIEELERDFNVKIDDLHRPFIDTL 543

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           +        G  +      +   W ++ +       Y       + K W      I + I
Sbjct: 544 TRPNPDDPTGKSVMRRVPDVFDCWFESGSMPFAQIHYPF-----ENKEWFESADFITEYI 598

Query: 268 L----RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
                 F+ ++  +  L    P    +     +  KG+K+SK L N  DP+EV +  G D
Sbjct: 599 AQTRGWFYTLFVLSTALFDREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDRYGSD 658

Query: 324 ALRYFLVREIACGK-DGFYDKDGLKKRVN-ADLANGIGNLVSRSVSMILKDYDGMIPTPG 381
           ALR+ ++        +   DK+G   R    ++   I N           D         
Sbjct: 659 ALRFLMLSGSIVCGGNLLLDKEGNSIRDVLKNVIKPIWNSYHFFTMYANADGIKAEVCKD 718

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNP 441
             +  D  ++S C   ++ I+ +M N     A   +++    ++ ++  +      K++ 
Sbjct: 719 YQSTIDRYMISKCFEAVEGIQASMNNYNSQEACKILMNFFEVLNNWYIRRSRERFWKSDL 778

Query: 442 DRAST-VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLH 500
           D+  T    V   V   +       +P +   I+  L   + +    +  Q  K    L 
Sbjct: 779 DQDKTDAYNVLYTVFYYILRAAAPLLPLITENIWQGLKYEETSVHLANFPQLEKFDSQLI 838

Query: 501 KTFD 504
              D
Sbjct: 839 AKMD 842



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 23/194 (11%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     I D  AR+  +    V    G D HG      A+         
Sbjct: 51  PPFANGLPHYGHLLTGFIKDAFARYQTMLQKRVERRFGWDCHGLPAEMGAEKELGISGRT 110

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   F  +  +     A  +D   D   +T +K   ++    +K
Sbjct: 111 EIEKFGIEKFNNHCRTSVMKFSSEWEKYVNRQARWVDFHNDY--KTMDKSFMESVMWAFK 168

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           ++ DKG +Y+      YS   E   ++ E       +   ++   V +   E      + 
Sbjct: 169 QLYDKGLVYESVRVVPYSWACETPLSNFETRLDNAYREKTSKAVTVAFELLENPQQFKNI 228

Query: 172 YQDKLLSYYESHPE 185
            Q   L  + + P 
Sbjct: 229 EQKCKLLAWTTTPW 242


>gi|227820993|ref|YP_002824963.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227339992|gb|ACP24210.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 973

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPAD+++ G D     FH+    + 
Sbjct: 570 WHQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLLESC 623

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    V     +  KGEK+SKS GN + P EV+++ G D LR +++      +D
Sbjct: 624 ATRGRAPYDAVVTHGFTMDEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVMTTDY-WED 682

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    I       E ++ +L   + + 
Sbjct: 683 QRLGKTIIQ--TNIDAYRKLRNTIRWMLGTLAHDKGETI-ALADMPELEQLMLHRLAELD 739

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +RE        R    +I   + E+   YFD +K   L    P   R    L V   +
Sbjct: 740 RLVREGYDAFDFKRIARALIDFSNVELSAFYFDIRKD-ALYCDAPSSLRRRAALQVIRTL 798

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L   L   +P  A + +
Sbjct: 799 FDCLVTWLAPMLPFTAEEAW 818



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 57  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKI 116

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           +                      + F         +    L I   +D    T       
Sbjct: 117 EEKYREKGRNKDDVPVNEFRQECRDFASGWIEVQTEEFKRLGIEGDFDKPYTTMNFHAEA 176

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  KI+  G +Y+G     +S+ +     + E+              PV
Sbjct: 177 RIAGELMKIAKAGQLYRGSKPVMWSVVERTALAEAEIEYADVESDMIWVKFPV 229


>gi|170593417|ref|XP_001901461.1| isoleucyl-tRNA synthetase family protein [Brugia malayi]
 gi|158591528|gb|EDP30141.1| isoleucyl-tRNA synthetase family protein [Brugia malayi]
          Length = 1127

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 103/291 (35%), Gaps = 16/291 (5%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G  +      +   W ++ +       Y           +PAD    G D     F+ + 
Sbjct: 496 GRGVLHRVSEVFDCWFESGSMPYAQNHYPFERKNDFENNFPADFIAEGIDQTRGWFYTLM 555

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  L    P    + +   +   G K+SK   N  DP++++E+ G DALR +L+    
Sbjct: 556 VLSTALFDRPPFKNLICNGLVLAADGSKMSKRKKNYPDPLKIVEKYGADALRVYLINSPV 615

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES------D 387
              ++  + ++G++  +   L         R     +K Y+  I       ++      D
Sbjct: 616 VRGENLRFREEGVRDVLKDVLLPWYN--AYRFFVQNVKVYEYTINEEFTLLDAKSINVMD 673

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST 446
           + I+S  + +L  +R  M    ++  +  +        + Y    +     +  P   + 
Sbjct: 674 KWIMSFTNSLLNFVRNEMSAYRLYAVVTPLTKYFDSLTNCYIRLNRKRMKGEDGPKECAH 733

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV----ADENRCFQSLDQRL 493
            L     V+  +  L+  F P     ++  L      + E+  F+ + Q L
Sbjct: 734 SLSTLGNVLLLIVRLMAPFTPFFCEHMWHNLRHISLSSSESVHFEMIPQAL 784



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K+R +        +    PH GH     I DV+ R+   +G  V    G D HG  +   
Sbjct: 38  KDRIRYTFYDGPPFATGLPHYGHILAGTIKDVVTRWAHQNGYFVERRFGWDTHGLPVEYE 97

Query: 60  -------------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                              K           +  +       M   +D   D   +T   
Sbjct: 98  IDKILGIKGPHDVLKLGIDKYNAECRSIVMRYASEWENAVERMGRWIDFRNDY--KTLYP 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
              ++   ++ ++  KG +Y+G     +S       ++ E
Sbjct: 156 WFMESVWWVFSQLFKKGLVYRGVKVMPFSTACSTPLSNFE 195


>gi|169617327|ref|XP_001802078.1| hypothetical protein SNOG_11841 [Phaeosphaeria nodorum SN15]
 gi|111059765|gb|EAT80885.1| hypothetical protein SNOG_11841 [Phaeosphaeria nodorum SN15]
          Length = 1079

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y         K +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASAHYPFENVEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +   +   G+K+SK L N  DP  V+   G DALR +L+       +    K+
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPSLVMNSYGSDALRLYLINSPVVRAETLRFKE 640

Query: 345 GLKKRVNADLANGIGNLVSRS---VSMILKDYDGMIPTPGA-----FTESDESILSVCSR 396
              K + + +   + N         +++ K  D       A         D  IL+ C  
Sbjct: 641 AGVKEIVSKVLLPLWNSYQFFEQQATLLKKVADLHFVFDPAAGKTNKNILDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ +   M    ++  + +++ L+    + Y    +     +   +     L    EV+
Sbjct: 701 LLKFVNAEMAAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGEYGMEDTKHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F P + + I+  L
Sbjct: 761 YTLCRGLAPFTPFITDNIYLRL 782



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKQPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   D L   I +D+  +T +   
Sbjct: 90  IDKELGMSGRDAVRTLGIAKYNEKCRAIVMRYAGEWRTTIDRLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            +T   ++K++ DKG +Y+
Sbjct: 150 METEWWVFKRLFDKGAVYR 168


>gi|251788188|ref|YP_003002909.1| isoleucyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247536809|gb|ACT05430.1| isoleucyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 941

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 74/499 (14%), Positives = 149/499 (29%), Gaps = 60/499 (12%)

Query: 34  LARF-HRLDGLDVLFTTGTD---EHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
           L RF H   G DV    G     + G      A   G    V   +      +       
Sbjct: 307 LLRFRHPFMGFDVPAILGDHVTLDAGTGAVHTAGGHGPDDYVISQKYQLEIANPVGPNGC 366

Query: 90  SYDDFIRTTEKR-----HHDTCRILWKKISDKGDIYKGCYSGWYSLRD------EAYYND 138
               ++  T               + + + ++G +                     +   
Sbjct: 367 ----YLAGTFPELDGLFVFKANDKIVELLRERGALLHHEKLQHSYPCCWRHKSPILFRAT 422

Query: 139 DEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI---- 190
            + +   D      Q       VQW+ + G     S   ++          + +P+    
Sbjct: 423 PQWFVSMDQNGLRKQSLSEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFV 482

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----------------YIMYVWIDA 234
            +  + +    + L +    R     GI+   D                    + VW D+
Sbjct: 483 HKETQALHPRTAELIEAVAKRVE-QDGIQAWWDLNPADLLGAEAAEYEKVPDTLDVWFDS 541

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
            + + +         G       AD+++ G D     F +    +  +    P  + +  
Sbjct: 542 GSTHASVVDVRPEFSGHA-----ADMYLEGSDQHRGWFMSSLMISTAIKGKAPYRQVLTH 596

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  +G K+SKS+GN + P +V++++G D LR ++      G+    D+     + +A
Sbjct: 597 GFTVDGQGRKMSKSIGNTVSPQDVMDKLGADILRLWIGSTDYSGEIAVSDE---ILKRSA 653

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           D    I N   R +   L  +D       P      D   +        EI +  ++   
Sbjct: 654 DAYRRIRNTA-RFLLANLNGFDPAQHSVKPEDMVVLDRWAVGCAKAAQDEIVDAYESYDF 712

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           H  + +++   S      Y D  K  +   K +     +       +   L   +   + 
Sbjct: 713 HHVVQRLMQFCSIEMGSFYLDIIKDRQYTAKHDSVARRSCQTALFHIAEALVRWMAPIMS 772

Query: 468 KLANKIFDILFVADENRCF 486
             A++I+  L        F
Sbjct: 773 FTADEIWAYLPGERAQFVF 791



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLVGKPGEKVSAAQFRAECRKYAAEQVAGQKKDFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 166 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 202


>gi|300173565|ref|YP_003772731.1| isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887944|emb|CBL91912.1| Isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 930

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 120/322 (37%), Gaps = 27/322 (8%)

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN 237
               +H   +      N         L     +      G       + IM VW D+ ++
Sbjct: 479 QTIINHVADLFEAHGSNYWFEHEAKDLLPEGYTNAHSPHG--QFTKEEDIMDVWFDSGSS 536

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGF 295
                 +    +      +PADL++ G D     F++    +  ++ + P    +     
Sbjct: 537 ------WSGVMNTRDQLDYPADLYLEGSDQYRGWFNSSLITSVAVTGHAPYKNVLSQGFT 590

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
           +  KG K+SKSLGN I P++V +++G++ LR + +      +D     D LK+   +   
Sbjct: 591 LDGKGNKMSKSLGNTISPLDVADKMGIEILRLWTISVDTS-QDMPVSNDILKQVSES--- 646

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES-----ILSVCSRVLQEIRENMQNQLI 410
                 +  ++  ++ +      T  A T +D +        V +  ++ +R++  N   
Sbjct: 647 ---YRKLRNTLRFLMANTADFNYTTDAITFTDRAGHDQYFSVVLNNFIKNVRDSYDNYQF 703

Query: 411 HRALAQVISL--VSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVP 467
           +    +VI+   V     Y D  K     +  +     ++  V  E +  L  LL   +P
Sbjct: 704 NDIFKRVINFVNVDLSAFYLDIAKDVVYVEAPSGHARRSMQTVFYETLIALTKLLLPVLP 763

Query: 468 KLANKIFDILFVADENRCFQSL 489
             + ++++ L    E   F  L
Sbjct: 764 HTSEEVWEYL--PHEKLGFAYL 783



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  ENKPHFNLHDGPPYANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              AG               K F  +     ++    L I   + +   T +        
Sbjct: 105 LTKAGHDRKTMPKAEWRNLAKDFALEQVDKQKNDFKRLGIMADWQNPYITLQPEFEAAQL 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG I+KG    ++S   E+   + E+             N V
Sbjct: 165 RVFGEMASKGYIFKGSKPVYWSWSSESALAEAEIEYHDINSTSLYYANQV 214


>gi|160879093|ref|YP_001558061.1| leucyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427759|gb|ABX41322.1| leucyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 807

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 7/202 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 32  SKPKYYVLDMFPYPSGVGLHAGHPEGYTATDIVSRMKRMQGYNVLHPMGYDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A + G     F ++N  +F      L   YD    I T++ + +   + ++K++   G  
Sbjct: 92  AVSTGNHPNGFTEKNIESFSKQLKELGFDYDWSKMIATSDPKFYKWTQWIFKQLYLDGYA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DEV  G           PV     + +     A+ +KLL  
Sbjct: 152 KYIDMPVNWCEELGTVLSNDEVIDGKS----ERGGYPVIRKNMKQWVINQPAFAEKLLEG 207

Query: 180 YESHPEFILPIERRNEVISFVK 201
            E         + +   I   +
Sbjct: 208 LEEIDWPESTKDMQRHWIGKSE 229



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 90/271 (33%), Gaps = 48/271 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLSA--------N 283
                Y+      +  +    K W P DL++ G +    H +Y   +             
Sbjct: 505 WYFMRYIDPDNQEEFANQELLKHWLPVDLYIGGPEHAVGHLMYSRIWNRYLYDKGLSPVK 564

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V     +   G K+ K     V++P ++I + G D LR + +          ++
Sbjct: 565 EPFKKLVHQGMILGSNGIKMGKRFPEFVVNPSDIIRDYGADTLRLYEMFMGPLEVSKPWN 624

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G++         G    ++R  +    + +       + T        V  + ++++ 
Sbjct: 625 QQGVE---------GARKFINRVWTFFTNEENITDDNKDSLT-------KVYHQTVKKVT 668

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
            + +    + A++Q++  V+ V +                    V     E       + 
Sbjct: 669 SDFEQLGFNTAISQMMIFVNSVYK--------------------VGSCPREYAEGFIKMY 708

Query: 463 QAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
               P +  +++++L   +   N  + + D+
Sbjct: 709 SCICPHVGEEMWNVLGHNNTLANESWPTYDE 739


>gi|254827094|ref|ZP_05231781.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258599477|gb|EEW12802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 921

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 107/280 (38%), Gaps = 24/280 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ ++  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMMIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSL 489
             E +  L  LL   +P    ++++ L     E+   Q L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDL 782



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|124009039|ref|ZP_01693723.1| valyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123985359|gb|EAY25274.1| valyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 908

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 125/360 (34%), Gaps = 34/360 (9%)

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--DDPQY 226
                 + L +    P + LP     E    V   L +     +  D GI+       + 
Sbjct: 405 QDWCISRQLWWGHRIPAYYLPGNSEEEERFVVAKNLDEALEKAQAIDPGIQKEDLRQEED 464

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           ++  W  +    ++              ++P    V G DI+ F  +      + +    
Sbjct: 465 VLDTWASSWLWPISVFE-----PDELDYYYPTTTLVTGFDIIFFWVMRMIIAGYYVKDEK 519

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK- 343
           P     F+         K+SKSLGN  D  +++E  G D LRY ++   A G D  +D  
Sbjct: 520 PFKHVYFTGMVRDKMRRKMSKSLGNSPDVFKLMERYGTDGLRYGILSSAAAGNDIMFDTP 579

Query: 344 -------DGLKKRVNAD---LANGIGNLVSRSVSMILKDY------DGMIPTPGAFTESD 387
                  D +++    D   L + I +   R  + I + +      +     P     + 
Sbjct: 580 VPPDNASDAVREAFFEDSKNLDSNICDNGRRFANKIFQSFRLINMWEVDDSLPNPNKVAI 639

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE---VDRYFDAQKPW---ELKKTNP 441
           E   ++ ++ L  I +++    I  AL ++  L         Y +  KP     + K+ P
Sbjct: 640 EWFEAIFNQELTVIEKSLSEFRISEALTKLYLLFWHNGFCSWYLEMIKPEFDQAVGKSKP 699

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
               T    TV+   +L   L  F+P +  +I+ ++    E      L     PG    +
Sbjct: 700 IDGET-YRFTVDYFERLLNALHPFMPFITEEIWQLIKERGEKDTV-CLATYPTPGIQNPE 757



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE   I           H+GH     I DVL R  R++G +  +  GTD          
Sbjct: 40  DREPYTIVIPPPNVTGVLHMGHILNNTIQDVLIRKARMEGKNACWVPGTDHASIATEAKV 99

Query: 63  Q----------------NAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                                    + ++           L  S  +D    T +++  +
Sbjct: 100 VRMLREKGIKKSEIGRDKFMEYAWEWKEKYGGIILKQLQTLGASCDWDREAFTMDEKRSE 159

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               ++ K+ +   IY+G     +    +   +++EV  
Sbjct: 160 QVLDIFIKLYEDKKIYRGLRMVNWDPVGKTTVSNEEVIH 198


>gi|15964550|ref|NP_384903.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307314740|ref|ZP_07594336.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307320034|ref|ZP_07599455.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|15073728|emb|CAC45369.1| Probable isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894249|gb|EFN25014.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306898964|gb|EFN29610.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 969

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPAD+++ G D     FH+    + 
Sbjct: 566 WHQVTDILDVWFDSGSTHTFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLLESC 619

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GN + P EV+++ G D LR +++      +D
Sbjct: 620 ATRGRAPYNAVITHGFTMDEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVMTTDY-WED 678

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    +       E +  +L   + + 
Sbjct: 679 QRLGKTIIQ--TNIDAYRKLRNTIRWMLGTLAHDKG-EVVALSDMPELERLMLHRLAELD 735

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +RE        R    +I   + E+   YFD +K   L    P   R    L V   +
Sbjct: 736 RLVREGYDAFDFKRIARALIDFSNVELSAFYFDIRKD-ALYCDAPSSLRRRAALQVIRTL 794

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L   L   +P  A + +
Sbjct: 795 FDCLVTWLAPMLPFTAEEAW 814



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +                      + F         +    L I  D     T    H   
Sbjct: 113 EEKYREKGKNKDEVPVNEFRKECREFASGWIGIQTEEFKRLGIEGDFENPYTTMNFHAEA 172

Query: 107 RILWKKIS--DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           RI  + +     G +Y+G     +S+ +     + EV              PV
Sbjct: 173 RIAGELMKIARSGQLYRGSKPVMWSVVERTALAEAEVEYADVESDMIWVKFPV 225


>gi|41615024|ref|NP_963522.1| hypothetical protein NEQ230 [Nanoarchaeum equitans Kin4-M]
 gi|40068748|gb|AAR39083.1| NEQ230 [Nanoarchaeum equitans Kin4-M]
          Length = 1016

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 16/277 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G  +  +P  ++ VW+D+            + + +   F+P D  + G D +   F
Sbjct: 575 CPVCGRPMKREPD-VLDVWLDSG----GAFYATFDNEEAYKIFYPFDFILEGWDQIRGWF 629

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           +++     L +   P      S   +  +G K+SKSLGN I   E++E+ G DA+R F +
Sbjct: 630 YSLLGEGVLYTNQSPYKNVYVSGFVLDEQGRKMSKSLGNFIYARELMEKYGADAVRLFTI 689

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
           +     +D     DG+K++ +    N + N+V        K+Y  + P P      D+ +
Sbjct: 690 QATGPYQDLILRIDGIKEKQSN--LNILYNIVKY--YFDQKEYLKVNPEPKKLNIVDQYV 745

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYV 450
           +   ++ ++E     +N  I +A   +     E+ R++       ++K+  D A+T+LYV
Sbjct: 746 IYKINKAIEETINYFENYQIWKAPKPLEEFWLELSRFYIKVNRERIEKSKDD-AATILYV 804

Query: 451 TVEVIRQLAILLQAFVPKLAN----KIFDILFVADEN 483
               + +L   +   +P  A     K+ D L   +E+
Sbjct: 805 LKYSLDKLIRAIAPIIPFSAEYLYQKMRDELGYKEES 841



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 19/159 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +K  +K        + N   H+GHA+   + D   R+  + G  +    G D HG  I  
Sbjct: 28  LKSGKKWSYLDGPPFANDDIHVGHAWGRALRDSEIRYRLMRGYKIYVRPGFDTHGLPIEV 87

Query: 61  AAQNAGVTT-----------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKR 101
             +     T                 + F  +N          L +   YD+   T +  
Sbjct: 88  KLEKEHGFTNKDDIIKYGVDKFIEEARQFAYKNINKQISSFKRLGVLADYDNPYFTYDNN 147

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + +    + KK  ++G +YKG Y   +  R +     + 
Sbjct: 148 YIERIWKIIKKAWEEGLLYKGKYVVHWCPRCQTALAPNY 186


>gi|298372833|ref|ZP_06982823.1| leucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275737|gb|EFI17288.1| leucine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 930

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 86/239 (35%), Gaps = 16/239 (6%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D +G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRQKGFNVLHPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V  D+N R +R   D +  S+  D  IRT++  ++   +  + ++ D    
Sbjct: 89  AIQTGQHPAVTTDENIRRYRQQLDKIGFSFDWDREIRTSDADYYKWTQWAFIRMFDSYYC 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                +       E +  + +   G D     A    +++  EE      S  + +    
Sbjct: 149 NTTQQARPIGELIECF--ERQGNIGLD----IAHTEEIEFGAEE----WKSWDERRRSEV 198

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
             ++    L     N           D      +   G  +    Q +M  W   ++ Y
Sbjct: 199 LMNYRIAYLAETAVNWCEKLGTVLANDEVQDGVSIRGGYPVV---QKMMKQWSLRVSAY 254



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 118/348 (33%), Gaps = 57/348 (16%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
           +      +   S +    L Y     +F+       +   F K   + +   R  F + I
Sbjct: 579 YWRNVDLYLGGSEHATGHLIYCRFWTKFLFDYGYIKDDEPFAKLINQGMIQGRSNFVYRI 638

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
           K  +              +Y     Y              D++++  DIL     +    
Sbjct: 639 KNTNT-----------FVSYSKKESYDTTEIH-------VDVNLVENDILDTDR-FCRWQ 679

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
              A+                 EK+SKS+ NV++P +++E  G D LR + +      + 
Sbjct: 680 PEFADAEFVVDADGKYRCGWAVEKMSKSMYNVVNPDDIVERYGADTLRLYEMFLGPVEQS 739

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
             +D  G+         +G+   + R  +++      ++      TE +   L    + +
Sbjct: 740 KPWDTKGI---------DGVHRFLKRLWALVYDAQGNLLLDDRQPTEEE---LKTLHKTI 787

Query: 399 QEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           ++I  +++N   + +++  +  V+E                     ST       +I  L
Sbjct: 788 KKITYDIENFSFNTSVSAFMICVNE--------------------LSTAKCSKRAIIEPL 827

Query: 459 AILLQAFVPKLANKIFDILFVADE--NRCFQSLDQRLKPGFMLHKTFD 504
           A++L  F P +A +I+ +   +    +  F   D+R     ++  T  
Sbjct: 828 AVILAPFAPHIAEEIYSLCGNSTTVCDAAFPECDER----HLVEATVK 871


>gi|225870036|ref|YP_002745983.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699440|emb|CAW92935.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 932

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 23/274 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           +      IM VW D+ ++      +    +      +PADL++ G D     F++    +
Sbjct: 517 VFTKETDIMDVWFDSGSS------WNGVMNARDHLAYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        
Sbjct: 571 VAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           D     D L +   ++    I N + R +     D++              D+ +    +
Sbjct: 630 DVRVSMDILGQV--SETYRKIRNTL-RFLLANTSDFNPHTDKVAYAELAAVDKYMTIKFN 686

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLY 449
           +++  I    +          V++   V     Y D  K     +        R  TV Y
Sbjct: 687 KLVGAINTAYERYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLARRRMQTVFY 746

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              +++  +  LL   +P  A +I+  L    E+
Sbjct: 747 ---DILVNITKLLTPILPHTAEEIWSYLEHEPED 777



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRAKSMSGYQAPFVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        RD    L +S  +D+   T +        
Sbjct: 105 LAKQGVKRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWDNPYVTLDPSFEADQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANRV 214


>gi|223998058|ref|XP_002288702.1| leucyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975810|gb|EED94138.1| leucyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 907

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 7/199 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++K Y+     YP+    H+GH      +DV++R+ R+   DVL   G D  G    +
Sbjct: 99  STKKKKYVLDMFPYPSGAGLHVGHPEGYTASDVMSRYWRMTQHDVLHPIGWDSFGLPAEQ 158

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A N G   ++   +N  NF+    +L  SYD    + TT+  +    + ++ ++  KG 
Sbjct: 159 FAINTGTHPELTTAKNIANFKRQLQMLGFSYDWEKELATTDVNYVKWTQWIFLQLYKKGL 218

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +   S  +         ++EV  G          +PV  +    +  +++ Y D+L  
Sbjct: 219 AKQSEVSVNWCPALGTVLANEEVING----LSERGDHPVVRLPLRQWVLKITEYADRLQQ 274

Query: 179 YYESHPEFILPIERRNEVI 197
             +        +  + + I
Sbjct: 275 GLDGLDWPSGTMVAQEQWI 293



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 118/372 (31%), Gaps = 83/372 (22%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           PV++ E           +   +  +    +    + R  +   F + G      +     
Sbjct: 508 PVEFPEGVDPSAADLPLELPEMEDFSPGDDPAGCLARAKDWRYFQRDGKWFARETNTMPQ 567

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW 275
           W        +++      A  +      ++           P DL+V G +    H +Y 
Sbjct: 568 WAGSCWYYFRFLDPKNDGAAFSPELDEDWM-----------PVDLYVGGAEHAVLHLLYA 616

Query: 276 PAFLLSAN--------LPLPKKVFSHGFILHKGE-------------------------- 301
             +              P  K V     +   GE                          
Sbjct: 617 RFWHQVLYDLGYTKHPEPFQKLVHQGMILGSDGEKVSDLPHYDVLSSLLFQSLTPTLFVF 676

Query: 302 ----KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
               K+SKS GNV++P +V++  G DALR + +          +    +   V     N 
Sbjct: 677 YSNYKMSKSRGNVVNPDDVVDVHGADALRLYEMFMGPLEAVKPWQTSQVSGVVR--FQNK 734

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           + N+V  +V               +  E DE    +  + ++++ E++++   + A++ +
Sbjct: 735 LYNVVQSAV------------NNDSSVEMDEETTKILHKTMKKVTEDIESMSFNTAISAM 782

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           + L + ++          LK   P  A+           +L +++  F P L  + +  L
Sbjct: 783 MVLTNHLN---------SLKDKVPREAA----------EKLTLMVSPFAPHLGEECWKQL 823

Query: 478 FVADENRCFQSL 489
              DE+  +   
Sbjct: 824 G-NDESLAYHPW 834


>gi|124025030|ref|YP_001014146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166229754|sp|A2C071|SYI_PROM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123960098|gb|ABM74881.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 967

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 112/291 (38%), Gaps = 29/291 (9%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                  M VW D      + + +       +   +PADL++ G D     F +    + 
Sbjct: 547 WQKGTDTMDVWFD------SGSSWSSVISKKENLNYPADLYLEGSDQHRGWFQSSLLTSV 600

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI---------EVIEEVGVDALRYFL 329
            ++ + P  K +     +   G K+SKSLGN+IDP+         ++    G D LR ++
Sbjct: 601 AVNEHAPFKKVLTHGFALDENGRKMSKSLGNIIDPLVIINGGSNKKLDPAYGADVLRLWV 660

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESD 387
              +    D     + LK+   +D+   + N  SR +   L D+D  I           D
Sbjct: 661 -SSVDYSADVPIGSNILKQI--SDVYRKVRNT-SRYLLGNLYDFDYKIDSIDIANLPLLD 716

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RA 444
           + +L+  + V+ EI +   N    +    + +   V   + Y D  K      +  D R 
Sbjct: 717 KWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYVSSKSDFRR 776

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +   V   VI +++ L+   +  +A  I+  +    E     S+ QR  P
Sbjct: 777 RSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIPYDLEE---ASVFQRGWP 824



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +     Y N   H+GHA   ++ D++ +F  + G  V +  G D HG  I      
Sbjct: 59  ETFTLHDGPPYANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELKVLQ 118

Query: 65  AGV-------TTKVF-------VDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           A         T             +      D      +   +D    + +K+   +   
Sbjct: 119 AMDKSQRAELTPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQPYLSLDKKFEASQIK 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           L+ ++  KG IY+G     +S   +    + E+  
Sbjct: 179 LFGEMVFKGYIYRGLKPVHWSPSSQTALAEAELEY 213


>gi|56808288|ref|ZP_00366054.1| COG0495: Leucyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 620

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 6/189 (3%)

Query: 12  AIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
              YP+    H+GH       D+L+RF R  G +VL   G D  G    + A + G    
Sbjct: 1   MFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPA 60

Query: 71  VFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            F  +N  NF+   + L  SY  D  + TT+  ++   + ++ ++ +KG  Y+      +
Sbjct: 61  EFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTELYEKGLAYEAEVPVNW 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
                    ++EV      +       PV       +  +++AY ++LL   E       
Sbjct: 121 VEELGTAIANEEVLPDGTSERGGY---PVVRKPMRQWMLKITAYAERLLEDLEEVDWPES 177

Query: 189 PIERRNEVI 197
             + +   I
Sbjct: 178 IKDMQRNWI 186



 Score = 43.6 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 45/169 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAK----FWPADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +    +  +    + P D++V G +    H +Y   + 
Sbjct: 449 ETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWH 508

Query: 280 --------LSANLPLPK---------------------------------KVFSHGFILH 298
                   +    P  K                                  V +   +  
Sbjct: 509 KVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQ 568

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
              K+SKSL NV++P +V+E+ G D LR + +          + ++GL+
Sbjct: 569 APAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLE 617


>gi|332172861|gb|AEE22115.1| isoleucyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 942

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 63/405 (15%), Positives = 132/405 (32%), Gaps = 47/405 (11%)

Query: 116 KGDIYKGCYSGWYSLRDE-AYYNDDEVYKGADGQYYN----AQHNPVQWMEEEGYFFRLS 170
               Y   Y   +  +    +    + + G D          + +  QW+ E G     S
Sbjct: 401 HHFKYSHSYPHCWRHKTPLIFRATPQWFIGMDKNGLRESSIKEIHNTQWIPEWGESRIES 460

Query: 171 AYQDKLLSYYESHPEFILPI---ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-- 225
               +          + +PI     ++       +      ++++    GI+   D +  
Sbjct: 461 MVAGRPDWCISRQRTWGVPIALFVHKDTGDLHPNTDELIEQVAQRVESEGIQAWWDLEPQ 520

Query: 226 --------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                           + VW D+  ++       D+   S      ADL++ G D     
Sbjct: 521 ELLGDDADTFVKVLDTLDVWFDSGVSHYFVVDKRDDIPAS------ADLYLEGSDQHRGW 574

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +     + P  + +     +  KG+K+SKSLGN I P +V  ++G D LR ++
Sbjct: 575 FMSSLMTSVATKGHAPYKQVLTHGFTVDGKGKKMSKSLGNTIAPQQVTNKLGADILRLWV 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   +     + LK+  +A         +  +   +L + +G  P           
Sbjct: 635 ASTDY-RSEIAVSDEILKRSADA------YRRIRNTSRFLLANLNGFNPKTDLVPFEEMV 687

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
           E D+  +S    +  EI +  +   +     +++   S      Y D  K  +   K++ 
Sbjct: 688 ELDKWAVSRAHAIQAEIVKAYEAYDLLVVTQKLMQFCSIEMGSFYLDIIKDRQYTAKSDS 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               +       ++  L   +       A +I+  +   +E   F
Sbjct: 748 HARRSCQSALYHIVEALVRWMAPITSFTAQEIWQEMPWQEEEFVF 792



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIGHA   I+ DV+ +   L   D  +  G D HG  I   
Sbjct: 46  KGKTPFILHDGPPYANGDIHIGHAVNKILKDVIVKSKTLSDFDAPYVPGWDCHGLPIELM 105

Query: 62  AQ-------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + + ++     R     L +   +D   +T +       
Sbjct: 106 VEKKVGKPGKKVTAAEFRQKCREYAEKQINGQRTDFIRLGVLGEWDKPYKTMDFVSEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 +   G + KG     +     +   + EV  
Sbjct: 166 IRELGNVVRSGHLEKGFKPVHWCTDCGSALAEAEVEY 202


>gi|289209715|ref|YP_003461781.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288945346|gb|ADC73045.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 948

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 120/372 (32%), Gaps = 31/372 (8%)

Query: 139 DEVYKGADGQYYNAQHNPVQWM--EEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV 196
             +    + + +    N   W    +  +   +  +  +       H     P    +  
Sbjct: 449 RWMPNWGEARIHGMVVNRPDWCISRQRNWGVPIPFFVHRETGRLHPHT----PELIESVA 504

Query: 197 ISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
               ++G++           G K          + VW D+   + T         G    
Sbjct: 505 QRIEQAGIEAWFQLDPKELLGDKAEDYIKLNDTLDVWFDSGVLHSTVVEKRPELGGL--- 561

Query: 255 FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             P DL + G D     F +    +  +    P    +     +  KGEK+SKS GNV+ 
Sbjct: 562 --PVDLFLEGSDQHRGWFQSSLLTSVAMRGEAPYRAVLTHGFTVDEKGEKMSKSRGNVVA 619

Query: 313 PIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           P EV+  +G D LR ++           +  +    +   D        +  +   +L +
Sbjct: 620 PQEVVSTLGADILRLWVAA-------TDFSGEMAISKDILDRTADAYRRIRNTTRFLLGN 672

Query: 373 YDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVD 425
            +G  P   A         D  I++   +V +++ +   + L H+   +V +  S     
Sbjct: 673 LNGFDPAEHALELDELLPLDRWIVARALQVQEQVTKAYDDYLFHQIYQRVHNFCSVELGS 732

Query: 426 RYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADEN 483
            Y D  K  +       RA  +       V   L   +   +   A +I+ +L     ++
Sbjct: 733 FYLDVIKDRQYTTQADSRARRSAQTALYHVAEALTRWVAPILTFTAEEIWQLLPGDRPDS 792

Query: 484 RCFQSLDQRLKP 495
             F +  + L P
Sbjct: 793 VLFATWYEGLAP 804



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  ++    Y N   H+GHA   ++ D++ +   L G D  +  G D HG  I    
Sbjct: 54  GRPRFVLADGPPYANGSIHVGHAVNKVLKDIIVKSRTLSGFDAPYVPGWDCHGLPIELKV 113

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +           L +   +D    T   +      
Sbjct: 114 EQNLGKAGRDVDAATFRKACREYAQEQVDGQSADFQRLGVLGDWDHPYLTMNYQVEADTV 173

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +I  +G +  G     + +   +   + EV  
Sbjct: 174 RALGRIFKRGHVQMGEKPVHWCVDCGSALAEAEVEY 209


>gi|156849085|ref|XP_001647423.1| hypothetical protein Kpol_1018p98 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118109|gb|EDO19565.1| hypothetical protein Kpol_1018p98 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1072

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 105/262 (40%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y        ++  PA+    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYASQHYPFENTEKFSQRVPANFISEGLDQTRGWFYTLSVLGTHLFG 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            +P    + S   +   G K+SKSL N  DP  V+ + G DALR +L+       +   +
Sbjct: 583 TVPYKNVIVSGIVLAADGRKMSKSLKNYPDPNIVLNKYGADALRLYLINSPVLKAESLKF 642

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSR 396
            ++G+K+ V+  L         +   ++++ K+ D      PT  +    D+ IL+    
Sbjct: 643 KEEGVKEVVSKVLLPWWNSYKFLEGQIALLKKNSDIDFKYDPTVKSDNVMDKWILASMQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I + M    ++  + ++++ + E+ + Y    +     +   +     L    + +
Sbjct: 703 LVQFIHQEMAEYKLYTVVPRLLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
                 +  F P L++ I+  L
Sbjct: 763 FTFVRAMAPFTPFLSDSIYMRL 784



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 35  KDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGLPIEHI 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    K  V   +  +R+    L   I +D+  +T     
Sbjct: 95  IDKKLGITCKEDVFKYGIDNYNRECKAIVMTYAEEWRNTIGRLGRWIDFDNDYKTMYPSF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ DK  +Y+G     YS       ++ E  +   
Sbjct: 155 MESVWWAFKQLHDKDQVYRGFRVMPYSTGLTTPLSNFEAQQNYK 198


>gi|145592190|ref|YP_001154192.1| isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283958|gb|ABP51540.1| Isoleucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 980

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/284 (20%), Positives = 108/284 (38%), Gaps = 12/284 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                Y+M VW+D+   +L      +       K +P D    G D     F+++   + 
Sbjct: 522 WVREPYVMDVWLDSGVAWLAAVD-GERNRELWGKLFPYDFVTEGIDQTRGWFYSLLATSV 580

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
           L +   P    +     +   G+K+SKS GNV+   ++ E+ G D +R +++ + A  +D
Sbjct: 581 LYTGRAPYKTVLIQGLILDKHGQKMSKSKGNVVWAKDLFEKYGADPVRLYILSKAAPWED 640

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAF----TESDESILSV 393
             +D D +  R        + N+   +   M L  +D        +     E D  +LS 
Sbjct: 641 LSFDPDEV--RHVLADLGILWNVARFADTYMSLDGFDAERYPLEEWLGRGLEEDRWVLSE 698

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPD-RASTVLYVT 451
            + ++ E    ++N   H+A+A     V E +   +       +    P         V 
Sbjct: 699 LNSLVAEFASYLKNFEFHKAVAMWRDFVVETLSHRYLRLLRRRVWSDEPTPDKYAAYAVL 758

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             VI+ + IL   F P +A  ++       E    +S+     P
Sbjct: 759 HHVIKTVLILASVFTPFVAEYLWQAYVRKYEKSAPESVHLAQYP 802



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 53/167 (31%), Gaps = 24/167 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R            N  PH+GH       DV+ RFHRL G DV    G D  G  +   
Sbjct: 38  RGRPVYAFLEGPPTTNGMPHVGHIRGRTYKDVVLRFHRLLGYDVWVQGGWDMQGMPVEWE 97

Query: 60  ------------------KAAQNAGVTTKVFVDQNSRNF--RDMADVLDISYDDFIRTTE 99
                             +              Q  R +  R +   LD+      R   
Sbjct: 98  VEKKLKLRSKKDVEQYGLEKFALECNALVEEYLQYWREWGTRRLGLWLDLENAYETR--R 155

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            R+ +    + K+  + G + +     W+  R E   +D EV  G +
Sbjct: 156 PRYLEYAWRVVKRAHEAGLLAEDYRVLWFCPRCETSLSDHEVALGYE 202


>gi|291525132|emb|CBK90719.1| leucyl-tRNA synthetase [Eubacterium rectale DSM 17629]
 gi|291529379|emb|CBK94965.1| leucyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 804

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 68/198 (34%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 32  SKPKYYALDMFPYPSGVGLHAGHPEGYTATDIMSRMKRMQGYNVLHPMGYDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N G     F  +N   F      L   YD    I T++   +   + ++KK+ + G  
Sbjct: 92  AVNTGHHPNGFTQKNIETFSKQLRELGFDYDWSKMISTSDPEFYKWTQWIFKKLYEAGYA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DEV  G           PV     + +     A+ +KLL  
Sbjct: 152 KHIDMPVNWCEELGTVLSNDEVIDGKS----ERGGYPVVRKNMKQWVIDQPAFAEKLLEG 207

Query: 180 YESHPEFILPIERRNEVI 197
            +         E +   I
Sbjct: 208 LDEIDWPESTKEMQRNWI 225



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 51/264 (19%)

Query: 233 DALTNYLTTTGYLDNPDGSKA-----KFW-PADLHVIGKDILRFHAIYWPAFLLSA---- 282
            A +++        + D   A     K W P DL+V G +    H +Y   +        
Sbjct: 500 SAGSSWYYMRYIDPHNDKEFANQELLKHWMPVDLYVGGPEHAVGHLMYSRIWNRFLFDQG 559

Query: 283 ----NLPLPKKVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRYFLVREIACGK 337
                 P  K V     +   G K+ K     V++P +V+EE G D LR + +       
Sbjct: 560 LSPVKEPFKKLVHQGMILGSNGIKMGKRFPEFVVNPSDVVEEYGADTLRLYEMFMGPLEV 619

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
              ++   ++         G    ++R  +   +             E D  +  +  + 
Sbjct: 620 SKPWNDSNVQ---------GAKRFITRVWNFFTE-------PENIIEEDDGKLTRIYHQT 663

Query: 398 LQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
           ++++  + +    + A++Q++  V+EV +                          E    
Sbjct: 664 VKKVTNDFEALGYNTAISQMMIFVNEVYK--------------------AGRCPREFAEG 703

Query: 458 LAILLQAFVPKLANKIFDILFVAD 481
           L  +L    P +  +I+  +   D
Sbjct: 704 LIKMLSCVCPHVGEEIWQRMGHDD 727


>gi|188994683|ref|YP_001928935.1| leucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691473|sp|B2RIZ3|SYL_PORG3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|188594363|dbj|BAG33338.1| leucyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 925

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++  Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D  G    +
Sbjct: 28  TSKKPFYVLDMFPYPSGAGLHVGHPLGYIASDIFSRYKRLRGFNVLHPMGYDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N+  +R+  D +  SYD    IRT +  ++   +  + K+ D   
Sbjct: 88  YAIQTGQHPEKTTEENTARYREQLDKIGFSYDWEREIRTCDPNYYKWTQWAFLKMFDSYY 147

Query: 119 IYK 121
             +
Sbjct: 148 CNQ 150



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 84/225 (37%), Gaps = 37/225 (16%)

Query: 258 ADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D L       W     SA   L    +  G+ +    K+SKS+ NV++P ++
Sbjct: 658 VDVNIVSNDQLDIDRFRAWRPEYASAEFILEDGKYICGWAIE---KMSKSMFNVVNPDDI 714

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I   G D LR + +      +   +D +G+              L   +        DG+
Sbjct: 715 IARYGADTLRLYEMFLGPLEQSKPWDTNGIDGVHR--FLKKFWALYYNA--------DGI 764

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T  A T+ +   L    ++++++ +++++   + ++   +  V+E             
Sbjct: 765 RVTDTAPTKEE---LKSLHKLIKKVGQDIESFSFNTSIPAFMICVNE------------- 808

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                   +     +  ++  L  +L  F P +   ++  L V  
Sbjct: 809 -------LTAAKTTSRAILCPLLTVLSPFAPHITEWLWQELGVEG 846


>gi|283769512|ref|ZP_06342408.1| leucine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103780|gb|EFC05166.1| leucine--tRNA ligase [Bulleidia extructa W1219]
          Length = 797

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 70/198 (35%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H GH       D++ R  R+ G +VL   G D  G    + 
Sbjct: 30  SKPKYYALDMFPYPSGQGLHAGHPEGYTATDIICRKRRMQGYNVLHPMGYDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F ++N   FR        SYD    I T +   +   + ++K++ ++G  
Sbjct: 90  AIQTGNNPATFTEKNIETFRKQLKSFGFSYDWSREISTADPHFYHWTQWIFKQLFEEGLA 149

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DE+  G           PV     + +   + +Y +KLL  
Sbjct: 150 KCVDMPVNWCEELGTVLSNDEIIDGKS----ERGGYPVVRKNMKQWIIDIPSYAEKLLDG 205

Query: 180 YESHPEFILPIERRNEVI 197
            +         E +   I
Sbjct: 206 LDELDWPESTKEMQRNWI 223



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 93/267 (34%), Gaps = 47/267 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P DL++ G +    H +Y   +             
Sbjct: 497 WYYLRYIDPNNSKCLADFELLKHWMPVDLYIGGPEHAVGHLLYARMWNRFLYDKGITPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVI-DPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V     +   G K+ K     I DP  +IEE G D +R + +          + 
Sbjct: 557 EPFQKLVHQGMILGTNGIKMGKRFPEFIVDPNVLIEEYGADTVRVYEMFMGPLEASKPWS 616

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
             G++         G    ++R   ++++       +    +E+D S+  V    ++++ 
Sbjct: 617 DQGIE---------GTFKWLNRVYRLVVE-------SHKLTSENDGSLDRVYHATVKKVS 660

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           E++ +   + A++Q++  ++E  +                 A  V  + +E       + 
Sbjct: 661 EDIDSLSFNTAISQMMIFINECYK-----------------ADHVYQLYLE---NFVKMF 700

Query: 463 QAFVPKLANKIFDILFVADENRCFQSL 489
             F P L  +++ IL    +   F+  
Sbjct: 701 ACFAPHLGEELWTIL-TGKQGISFEKW 726


>gi|156549425|ref|XP_001602982.1| PREDICTED: similar to LOC100036668 protein [Nasonia vitripennis]
          Length = 1268

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 125/406 (30%), Gaps = 33/406 (8%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGD----IYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           SY    R+     +      + ++    D         Y     ++D+ + N     +  
Sbjct: 396 SYPYCWRSDTPLIYKAVPSWFIRVESIKDKLLQCNSETYWVPDYVKDKRFGNWLRDARDW 455

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                    NP+     E                        L      ++    +  + 
Sbjct: 456 AISRNRYWGNPIPLWVSEDGK-----------EVVCVGSIAELEKLTGQKITDIHRESID 504

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            L +   +   G         +   W ++ +       Y         + +PAD    G 
Sbjct: 505 HLKI--PSVRPGQPPLSRVPEVFDCWFESGSMPYAQMHYPFERVKEFEESFPADFIAEGI 562

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F+ +   +  L         + +   +   G+K+SK   N  DP+EV+ + G D
Sbjct: 563 DQTRGWFYTLLVISTALFGKPAFKNLIANGLILASDGQKMSKRKKNYPDPMEVVNKYGAD 622

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           ALR +L+       ++  + +DG++  V   L         R +   ++ Y+        
Sbjct: 623 ALRLYLINSPVVRAENLRFKEDGVRDIVKDVLLPWYNAF--RFLLQNIERYEHETGKTFV 680

Query: 383 FT--------ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKP 433
           +           D  ILS    +L  ++  MQ   ++  L ++I  +  + + Y    + 
Sbjct: 681 YEATHTLSGNLMDRWILSFTETLLNFLKTEMQAYRLYTVLPRLIKYIDNLTNWYVRMNRR 740

Query: 434 WELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +     +     L     V+  +  +   F P LA  +F  L
Sbjct: 741 RLKAEGTAQQEDCRAALNTLFRVVYTMVRINAPFTPFLAEFMFQRL 786



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + +        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 36  KGKPRYSFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQRGFHVERRFGWDTHGLPVEFE 95

Query: 60  -------------------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                 +        +  +  +    +   +D   D   +T   
Sbjct: 96  IDKALDIKGPDDVMKMGIDNYNKECRKIVMRYASEWEKIIGRLGRWIDFQNDY--KTLYP 153

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            + ++   ++K++ DKG +YKG     +S       ++ E
Sbjct: 154 WYMESIWWVFKQMFDKGLVYKGVKVMPFSTGCNTPLSNFE 193


>gi|323340625|ref|ZP_08080877.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091748|gb|EFZ34368.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 930

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 112/281 (39%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 520 FTKEMDIMDVWFDSGSSHQGVCA------QRDYLTYPADMYLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S + P  + +     +  KG K+SKSLGN I P EV++++G + +R +++       D
Sbjct: 574 AVSGHAPYKQIISQGFTLDGKGRKMSKSLGNTIVPSEVVDKMGAEIIRLWVLSVDTSA-D 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D   +   +            ++  +L +     P             D+ +  +
Sbjct: 633 VRVSMDSFSQISES------YRKFRNTMRFMLANTTDFDPAENTVAYDDLEACDKYMEVL 686

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-YFDAQKPWE-LKKTNPDRASTVLYV 450
            ++  +EI ++  N        ++I+ + +E+   Y D  K    ++  +  +  ++  V
Sbjct: 687 ANKFTKEILDDYANYNFMDIYKKLINFLTTELSAFYLDVAKDVVYVEAEDSHKRRSMQTV 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +V+ +L  L+   +P    +I++ L   ++      + +
Sbjct: 747 LYDVLVRLTKLMTPVLPHTTEEIWEYLKEPEDYAQLAEMPE 787



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRSKSMMGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AGV  K             +  +     +     L I   +D+   T          
Sbjct: 105 LKKAGVDRKTLTVADFREKCREYALKQVEGQKKDFKRLGIAGEWDNPYLTLHPEFEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K+++KG IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGKMAEKGLIYKGLRPVYWSWSSESALAEAEVEYH 201


>gi|149203918|ref|ZP_01880886.1| isoleucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149142360|gb|EDM30405.1| isoleucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 983

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 101/277 (36%), Gaps = 14/277 (5%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                +++ F  GI  PDD + +   + VW D+ + +       ++          ADL+
Sbjct: 565 WYKEGAKERFLSGIVNPDDWRKVDDILDVWFDSGSTHAFVLRDREDGSEDGL----ADLY 620

Query: 262 VIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + G D     FH+    A       P    +     +  KG K+SKSLGN + P EV+++
Sbjct: 621 LEGTDQHRGWFHSSMLQACGTRGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEEVVKQ 680

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D LR ++ +      D     + LK    AD    + N +   +  +    +     
Sbjct: 681 YGADILRLWVAQADY-TADLRIGPEILKGV--ADGYRRLRNTLRFMLGALAPFTEADRVD 737

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK 437
           P    E +  +L   + +  ++++  +         Q+ +         YFD +K     
Sbjct: 738 PAEMPELERWVLHRLAELDHKVKKGYETYDFQGVFQQIFNFCTLDLSAFYFDIRKDALYC 797

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +  R      V   +  +L   L   +     +++
Sbjct: 798 DGDTARRRAARTVLDLLFHRLTTWLAPVLVFTMEEVW 834



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 20/232 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I    
Sbjct: 58  GRVPFTLHDGPPYANGHLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPIEWKI 117

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                      + F +      R+    L I+  +D    T + R   
Sbjct: 118 EEQYRAKGMDKDKVDVVDFRQECRKFAEGWIDIQREEFKRLGITGCWDRPYLTMDFRAER 177

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEE 163
                ++K    G +Y+G     +S  ++    + EV Y   +      +   V  +  +
Sbjct: 178 IIAEEFQKFLMNGVLYQGSKPVMWSPVEKTALAEAEVEYHDKESFTVWVKFEVVDPVSGD 237

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           G            +    +   + +P  +       +  GL +++ + +   
Sbjct: 238 GSKLENRDLVGAYV-VIWTTTPWTMPSNKAVVYGDGISYGLYEVTSTPEECW 288


>gi|150399535|ref|YP_001323302.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012238|gb|ABR54690.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 1033

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 132/380 (34%), Gaps = 21/380 (5%)

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA-DGQYYNAQHNPVQWMEEEGYFF 167
           L++              G         +  D V     +G  +    N      +  +  
Sbjct: 412 LFRATEQWFLSISKIKEGIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNI---SRQRYWGI 468

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNE-VISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
            +  +       YE        I++ NE  +         +         G  +   P  
Sbjct: 469 PIPIWTCDCCKKYEVIGAISELIDKANEKDVDLSDLHKPTVDKITLKCSCGGIMTRTPD- 527

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++ VW D+      + G  +           A+    G D +   F++ +  + ++  + 
Sbjct: 528 VLDVWYDSGLAPYASIGSKELKK--------AEFITEGNDQVTKWFYSQHALSAVVFNDT 579

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  K +     +   GEK+SKSLGN++ P EV E+ G D LR++L+      +D  +   
Sbjct: 580 PYKKCMMHGFTLDETGEKMSKSLGNIVSPDEVTEKYGADVLRFYLLSANKAWEDLRFSYS 639

Query: 345 GLKKRVNADLANGIGNLVSRSV-SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            + +  +A   N + N  + S   M+L ++           + D  ILS  + V ++  E
Sbjct: 640 EMDEVRSA--LNTLWNSYAFSTNYMVLDEFIPNNEYFKHLKDEDAWILSRVNTVSKDAIE 697

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAIL 461
            ++   +H     +   +       Y    +     + N  +  +       VI +L ++
Sbjct: 698 ALEKPHLHTYTWMIRDFILNDLSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKLIMI 757

Query: 462 LQAFVPKLANKIFDILFVAD 481
           +    P ++ +I+  L   +
Sbjct: 758 MSPVTPHISEEIYQNLKTEN 777



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 54/158 (34%), Gaps = 22/158 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
              Y      Y +   H+G A+  II D + RF R+ G +VL   G D HG  I    +N
Sbjct: 37  PDYYFVDGPPYCSGAIHLGTAWNKIIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVEN 96

Query: 65  A------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
                                  K F   +  N       L I + DF        +D  
Sbjct: 97  EFNIGSKKDIETKIGTQVFIDKCKEFALNHLSNMEKQFKNLGI-WLDFENAYMPIKNDYI 155

Query: 107 RILWKKI---SDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            + W  +    +K  + K   SG++  R E    + EV
Sbjct: 156 EMGWWTLKKAHEKDLLTKDLRSGYWCPRCETSLAEHEV 193


>gi|85058392|ref|YP_454094.1| isoleucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123766475|sp|Q2NVY6|SYI_SODGM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84778912|dbj|BAE73689.1| isoleucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 938

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 118/351 (33%), Gaps = 35/351 (9%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLS 210
           +   VQW+   G     +   ++          + +P+     NE  +     ++ +   
Sbjct: 437 EIKDVQWIPGWGQARIETMVANRPDWCISRQRTWGVPMALFVHNETEALHPRTIELMESV 496

Query: 211 RKTF-DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKA 253
            +     GI+   D                    + VW D+ + + +             
Sbjct: 497 AQRVEQDGIQAWWDLDPAEILGDDAAHYHKVPDTLDVWFDSGSTHSSIVA----VRPEFE 552

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
              P D+++ G D     F +    +  +    P  + +     +  +G K+SKS+GNV+
Sbjct: 553 GHAP-DMYLEGSDQHRGWFMSSLMISTAMHGKAPYRQVLTHGFTVDGQGRKMSKSVGNVV 611

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P +V++++G D LR ++      G+    D+     + +AD    I N   R +   L 
Sbjct: 612 SPQQVMDKLGADILRLWVASTDYTGEMAVSDE---ILKRSADAYRRIRNTA-RFLLANLN 667

Query: 372 DYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
            +D      +P      D   +        EI     +   H  + +++   S      Y
Sbjct: 668 GFDPARHSVSPEQMVVLDRWAVGRAQAAQAEIVAAYDSYDFHNVVQRMMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +I  L   +   +   A++I+  +
Sbjct: 728 LDIIKDRQYTTKADSIARRSCQTALYHIIEALVRWMAPIMSFTADEIWGFM 778



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 67/250 (26%), Gaps = 15/250 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLMGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
            +                     +  +     +     L +  D      T         
Sbjct: 106 VEQLIGKPGEKVSAAEFRTACRRYAAEQVEGQKKDFIRLGVLGDWEHPYLTMNFATEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                  +      
Sbjct: 166 IRALGKIIANGHLHKGAKPVHWCIDCRSALAEAEVEYYDRTSPSIDVAFAADDVRAVAAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQY 226
           F  + +  ++     +   + LP  R   V       L ++          +      + 
Sbjct: 226 FGAADFAGQISLIIWTTTPWTLPANRAIAVHPDFDYQLVEVEGQGYILAADLVDSVMARA 285

Query: 227 IMYVWIDALT 236
            +  W    +
Sbjct: 286 GITCWTVLGS 295


>gi|68006554|ref|XP_670411.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56485641|emb|CAI03621.1| hypothetical protein PB301256.00.0 [Plasmodium berghei]
          Length = 233

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/125 (45%), Positives = 74/125 (59%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + +  YI+TAI Y N +PHIGHAYE+++AD LAR+HR  G DV FTTG DEHG KIA  A
Sbjct: 109 KNDNFYITTAINYVNGEPHIGHAYEIVLADTLARYHRNLGRDVFFTTGADEHGLKIANQA 168

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +   D N   F+ +   L  + D ++RTT   H    + +W K    GDIY G
Sbjct: 169 LRNNMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVKNGDIYLG 228

Query: 123 CYSGW 127
            Y GW
Sbjct: 229 EYEGW 233


>gi|34540579|ref|NP_905058.1| leucyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|48428522|sp|Q7MW49|SYL_PORGI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34396892|gb|AAQ65957.1| leucyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 925

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++  Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D  G    +
Sbjct: 28  TSKKPFYVLDMFPYPSGAGLHVGHPLGYIASDIFSRYKRLRGFNVLHPMGYDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +   ++N+  +R+  D +  SYD    IRT +  ++   +  + K+ D   
Sbjct: 88  YAIQTGQHPEKTTEENTARYREQLDKIGFSYDWEREIRTCDPNYYKWTQWAFLKMFDSYY 147

Query: 119 IYK 121
             +
Sbjct: 148 CNQ 150



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 84/225 (37%), Gaps = 37/225 (16%)

Query: 258 ADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D L       W     SA   L    +  G+ +    K+SKS+ NV++P ++
Sbjct: 658 VDVNIVSNDQLDIDRFRAWRPEYTSAEFILEDGKYICGWAIE---KMSKSMFNVVNPDDI 714

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I   G D LR + +      +   +D +G+              L   +        DG+
Sbjct: 715 IARYGADTLRLYEMFLGPLEQSKPWDTNGIDGVHR--FLKKFWALYYNT--------DGI 764

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T  A T+ +   L    ++++++ +++++   + ++   +  V+E             
Sbjct: 765 RVTDTAPTKEE---LKSLHKLIKKVGQDIESFSFNTSIPAFMICVNE------------- 808

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                   +     +  ++  L  +L  F P +   ++  L V  
Sbjct: 809 -------LTAAKTTSRAILCPLLTVLSPFAPHITEWLWQELGVEG 846


>gi|15594596|ref|NP_212385.1| leucyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|6919977|sp|O51267|SYL_BORBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2688147|gb|AAB91495.1| leucyl-tRNA synthetase (leuS) [Borrelia burgdorferi B31]
          Length = 840

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 132/390 (33%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P           I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKENPP--------REIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|195977738|ref|YP_002122982.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974443|gb|ACG61969.1| isoleucyl-tRNA synthetase IleS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 932

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 23/274 (8%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
           +      IM VW D+ ++      +    +      +PADL++ G D     F++    +
Sbjct: 517 VFTKETDIMDVWFDSGSS------WNGVMNARDHLAYPADLYLEGSDQYRGWFNSSLITS 570

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
             ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        
Sbjct: 571 VAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DN 629

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCS 395
           D     D L +   ++    I N + R +     D++              D+ +    +
Sbjct: 630 DVRVSMDILGQV--SETYRKIRNTL-RFLLANTSDFNPHTDKVAYAELAAVDKYMTIKFN 686

Query: 396 RVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLY 449
           +++  I    +          V++   V     Y D  K     +        R  TV Y
Sbjct: 687 KLVGAINTAYERYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLARRRMQTVFY 746

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
              +++  +  LL   +P  A +I+  L    E+
Sbjct: 747 ---DILVNITKLLTPILPHTAEEIWSYLEHEPED 777



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRAKSMSGYQAPFVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        RD    L +S  +D+   T +        
Sbjct: 105 LAKQGVKRKEMDLADYLDMCRQYALSQVDKQRDDFKRLGVSADWDNPYVTLDPSFEADQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANRV 214


>gi|160874276|ref|YP_001553592.1| isoleucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189082331|sp|A9L4U7|SYI_SHEB9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160859798|gb|ABX48332.1| isoleucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266509|gb|ADT93362.1| isoleucyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 940

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 130/411 (31%), Gaps = 49/411 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +    + +   D      Q        QW+ + G        ++
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNHGLRTQALKEIEQTQWIPDWGQSRIEKMVEN 461

Query: 175 KLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
           +          + +P    + R  E +      L +    R     GI+   D       
Sbjct: 462 RPDWCISRQRTWGVPITLFVNRETEELHPDSVSLMERVACRIEQQ-GIQAWWDLDAAELL 520

Query: 226 -----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
                        + VW D+ + + +         G        DL++ G D     F +
Sbjct: 521 GDEAEQYRKVTDTLDVWFDSGSTFSSVVAARPEFHGHG-----VDLYLEGSDQHRGWFMS 575

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
               +  ++   P  + +     +  KG K+SKS+GNVI P  V  ++G D LR ++   
Sbjct: 576 SLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQTVTNKLGADILRLWVAAT 635

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESD 387
              G+    D+  +  R            +  +   +L + +G  P             D
Sbjct: 636 DYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFEPAKDLVAVEDMVALD 688

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRA 444
             ++   + + QEI E  +    H    +++   S      Y D  K  +   K      
Sbjct: 689 RWVVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQEGHAR 748

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +       +   +   +   +   A++++ +L    +   F Q   Q LK
Sbjct: 749 RSCQSALYLISEAMVRWIAPILSFTADEVWQLLPGERDAYVFTQEWYQGLK 799



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ ++   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVNGQREDFIRLGVLGDWQNPYLTMDFSTEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFVAADSKAVAAKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVSMVIWTTTPWTLPANR 251


>gi|72383441|ref|YP_292796.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|84029557|sp|Q46HD5|SYI_PROMT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72003291|gb|AAZ59093.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 967

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 112/291 (38%), Gaps = 29/291 (9%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                  M VW D      + + +       +   +PADL++ G D     F +    + 
Sbjct: 547 WQKGTDTMDVWFD------SGSSWSSVISKKENLNYPADLYLEGSDQHRGWFQSSLLTSV 600

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI---------EVIEEVGVDALRYFL 329
            ++ + P  K +     +   G K+SKSLGN+IDP+         ++    G D LR ++
Sbjct: 601 AVNEHAPFKKVLTHGFALDENGRKMSKSLGNIIDPLVIINGGSNKKLDPAYGADVLRLWV 660

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESD 387
              +    D     + LK+   +D+   + N  SR +   L D+D  I           D
Sbjct: 661 -SSVDYSADVPIGSNILKQI--SDVYRKVRNT-SRYLLGNLYDFDYKIDSIDIANLPLLD 716

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RA 444
           + +L+  + V+ EI +   N    +    + +   V   + Y D  K      +  D R 
Sbjct: 717 KWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYVSSKSDFRR 776

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +   V   VI +++ L+   +  +A  I+  +    E     S+ QR  P
Sbjct: 777 RSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIPYDLEE---ASVFQRGWP 824



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           E   +     Y N   H+GHA   ++ D++ +F  + G  V +  G D HG  I      
Sbjct: 59  ETFTLHDGPPYANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELKVLQ 118

Query: 65  AGV-------TTKVF-------VDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           A         T             +      D      +   +D    + +K+   +   
Sbjct: 119 AMDKSQRAELTPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQPYLSLDKKFEASQIK 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           L+ ++  KG IY+G     +S   +    + E+  
Sbjct: 179 LFGEMVFKGYIYRGLKPVHWSPSSQTALAEAELEY 213


>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 921

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 145/432 (33%), Gaps = 38/432 (8%)

Query: 90  SYDDFIRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           SY    RT +          +   K   +             +  +   YN         
Sbjct: 392 SYPHDWRTKKPTIFRATAQWFASIKDFREDLLKAVEKTKWVPTWGETRLYNMVRDRGDWC 451

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                A   P+     E     ++    + +S         +  ER  + +       + 
Sbjct: 452 ISRQRAWGVPIPVFYAENEEPIITDETIEHVSNLFREHGSNVWFEREAKDLLPEGFTHEG 511

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
               R T             IM VW D+ +++             +    PADL++ G D
Sbjct: 512 SPNGRFT---------KETDIMDVWFDSGSSHQAVLEER------EDLHRPADLYLEGSD 556

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++    +  ++   P    +     +  +G K+SKSLGNV+ P +V++++G D 
Sbjct: 557 QYRGWFNSSLSTSVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVVIPEKVMKQLGADI 616

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           LR ++        D     + LK+         +   +  +   +L +     PT  A  
Sbjct: 617 LRLWVASVDYQA-DVRVSDNILKQ------VAEVYRKIRNTFRFLLGNLADFNPTTDAVA 669

Query: 383 ---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WEL 436
                E D  +L   ++++ +++++  +         V +   +     Y D  K    +
Sbjct: 670 VEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYHAVHNFCTIDMSSFYLDFAKDVLYI 729

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLD--QRL 493
           +  N     ++  V  E +  L  L+   +   A++++  +  V +E+     +   Q +
Sbjct: 730 EAENNVERRSIQTVLYETLLSLTKLVSPILSHTADEVWVHIPNVTEESVQLVDMPEVQEI 789

Query: 494 KPGFMLHKTFDP 505
           +    L + +D 
Sbjct: 790 EGADQLVEKWDA 801



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A
Sbjct: 45  EGRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     R+    L +   +D+   T + ++    
Sbjct: 105 LTKNKKVNRKEMTVAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 IKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|78067313|ref|YP_370082.1| isoleucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728930|sp|Q39DM8|SYI_BURS3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77968058|gb|ABB09438.1| Isoleucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 945

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++   ++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 3/94 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 55  GRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQI 114

Query: 63  QN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
           +      +     + +      +  +   + +  
Sbjct: 115 EKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|317046855|ref|YP_004114503.1| isoleucyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948472|gb|ADU67947.1| isoleucyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 939

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/399 (14%), Positives = 127/399 (31%), Gaps = 44/399 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+    A       +   VQW+ + G   
Sbjct: 396 HVEKLLHSYPHCWRHKTPIIFRATPQWFISMDQKGLRAQS---LKEIKGVQWIPDWGQAR 452

Query: 168 RLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDP 224
             +   ++          + +P+     NE        L  +    +     GI+   D 
Sbjct: 453 IEAMVANRPDWCISRQRTWGVPMALFVHNETEQLHPDTLALMEKVAQRVEQDGIQAWWDL 512

Query: 225 Q----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
                              + VW D+ +                    P D+++ G D  
Sbjct: 513 DPRDLMGDDADNYSKVPDTLDVWFDSGSTSYAVVD----ARPEFDGHSP-DMYLEGSDQH 567

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              F +    +  +    P  + +     +  +G K+SKS+GN + P +V++++G D LR
Sbjct: 568 RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMDKLGADILR 627

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
            ++      G+      + LK+  +A         +  +   +L + +G  P     +  
Sbjct: 628 LWVASTDYSGEMAV-SDEILKRSADA------YRRIRNTARFLLANLNGFNPATDKVSPE 680

Query: 387 -----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KK 438
                D   +        +I  +  N   H  + +++   S      Y D  K  +   K
Sbjct: 681 EMVVLDRWAVGRALDAQNDIVASYANYDFHEVIQRLMQFCSVEMGSFYLDIIKDRQYTAK 740

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            +     +       ++  L   +   +   A++I+  L
Sbjct: 741 GDSLARRSCQTALWHIVEALVRWMAPIMSFTADEIWGYL 779



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 62/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGFDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T   +     
Sbjct: 106 VEQMIGKPGEKVSAAEFRAACRQYAAEQVEGQKKDFIRLGVLGDWDRPYLTMNFQTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + L   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCLDCRSALAEAEVEYYDKTSPSIDVMFNALDADAVRAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +SA +  +     +   + +P  R
Sbjct: 226 FGVSASEGPVSLVIWTTTPWTMPANR 251


>gi|282851118|ref|ZP_06260492.1| leucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282558070|gb|EFB63658.1| leucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 804

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++  Y      +P+ +  H+GH       D+++R  R    +VL   G D  G    + 
Sbjct: 28  KKKNYYALDMFPFPSGKGLHVGHPEGYTATDIISRMKRAQAYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +    +N  NF+   + L  SY  D  + T++  ++   + +++++  KG  
Sbjct: 88  ALKTGEDPEKVTKENIANFKKQLNKLGFSYDWDREVTTSDPNYYKWTQWVFEQMYKKGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++E+  G           PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEIVDGKT----ERGGYPVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  P++           G
Sbjct: 204 -LDDLDWPEPVKEMQRNWIGRSEG 226



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 134/415 (32%), Gaps = 56/415 (13%)

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                     + ++    +           +   N          Q Y  +  PV   E+
Sbjct: 374 KHINSDFLDGLDNEEAKKRMIEWLEDHNAGQKKVNYKLRDWDFSRQRYWGEPIPVIHWED 433

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
                                    LP     +     +S L +L+      D   +   
Sbjct: 434 GTTSLVPED-----------ELPLRLPHATDIKPSGTPESPLANLTDWVNVVDKNGRKGK 482

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDN----PDGSKAKFWPADLHVIGKDILRFHAIYWPAF 278
                M  W  +   YL      ++          K+ P DL++ G +    H +Y   +
Sbjct: 483 RETNTMPNWAGSSWYYLRYIDPHNDKELADYDLLKKWLPVDLYIGGAEHAVRHLLYARFW 542

Query: 279 L--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
                    +    P  +++++ G IL   EK+SKS GNV++P +VI+E G D+LR + +
Sbjct: 543 HKVLYDLGVVPTKEPF-QRLYNQGLILKNHEKMSKSKGNVVNPDDVIDEYGADSLRMYEM 601

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD-GMIPTPGAFTESDES 389
                     +D +G                + R   + + D D   IP      ++D  
Sbjct: 602 FMGPLDASIDWDDNG---------PASTKKFLDRVWRLFVNDLDLKAIPQERIVDKNDGE 652

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           +  V +  ++++ E+      + A++Q++  ++                    +A T+  
Sbjct: 653 LDKVYAETVKKVTEDFDALHFNTAISQMMVFINAA-----------------QKAKTIPR 695

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFD 504
              E       LL    P +  +I+ +    DE+  +    +   P  ++  T +
Sbjct: 696 ---EYAEGFVKLLAPVAPHMMEEIWQVFG-HDESISYAKWPEY-DPAKLVESTVE 745


>gi|188587906|ref|YP_001922274.1| leucyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498187|gb|ACD51323.1| leucyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 816

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  Q H GH +     D  AR  R+ G +V    G D  G      A 
Sbjct: 31  KKLYTLEMFSYPSGAQLHAGHWFNYGPTDSWARLKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  Y+
Sbjct: 91  KTGIHPKDSTFKNIETMEKQLKSMGAMFNWENEVVTCSPDYYKWTQWLFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V   +   +FF+++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVVDG----LCERCESEVIKKDLTQWFFKITDYADELLDKLD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYV 230
                      +   +           +   + ++ +     D    + YV
Sbjct: 207 GLDWPEKTKSMQKHWVGRSYGAQVTFKVKDSSLEFDVFTTRVDTLNGVTYV 257



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 111/383 (28%), Gaps = 53/383 (13%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + +E G            L Y             + E            
Sbjct: 422 QRYWGAPIPVIYCDECGIVPVPEKDLPVELPYNVEFTPDGKSPLGKCEEFINTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+       +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKREADTLDTFVCSSWYYLRY--------PDNKNTDAPFDPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLKFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K    A   + I   +     +I    +     
Sbjct: 594 FGADVFRMYLMFGFAYVEGGAWSDDGVKSV--ARFVDRIERTLESCRDIINASENIKTTI 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +          ++ + E+ +    + A+A+++   + + +Y  A         
Sbjct: 652 DSEEKDLNFW----RHTAIKGVSEDAEKMQFNTAIARLMEFTNALHKYIQA------DTK 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF------------------VAD 481
           NP           E +     LL  F P    + +++L                   V D
Sbjct: 702 NPK-------FLKETVVDFLKLLAPFAPHFTEEQWNLLGHNSTIFNEKWPEFNPAALVKD 754

Query: 482 ENRCFQSLDQRLKPGFMLHKTFD 504
           E      ++ ++K   M+    D
Sbjct: 755 EVEIAIQVNGKIKAKIMIPSNLD 777


>gi|315180775|gb|ADT87689.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 244

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 93/240 (38%), Gaps = 28/240 (11%)

Query: 25  AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA 84
             E I AD+  R+ RL G  V F    D HG  I   AQ  G+T +  +   S   +   
Sbjct: 1   MLEHIQADIWVRYQRLRGNIVNFICADDAHGTPIMLKAQQMGMTPEEMIAAVSEEHQKDF 60

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD----- 139
              DIS+D++  T  + + +    ++ ++   G I     S  +    E +  D      
Sbjct: 61  AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQLFDPEKEMFLPDRFVKGT 120

Query: 140 ------EVYKGADGQYYNAQHNPVQ--------------WMEEEGYFFRLSAYQDKLLSY 179
                 E   G +       ++P +                + E +FF L  ++  L  +
Sbjct: 121 CPKCKSENQYGDNCDACGETYSPTELINPKSAVSGATPIMKDSEHFFFDLPQFESMLKEW 180

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYL 239
             S     L  E  N++  + +SGL+   +SR    +G +IP +     YVW+DA   Y+
Sbjct: 181 TRSGS---LQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEKNKFFYVWLDAPVGYM 237


>gi|251778903|ref|ZP_04821823.1| leucine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083218|gb|EES49108.1| leucine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 816

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  Q H GH +     D  AR  R+ G +V    G D  G      A 
Sbjct: 31  KKLYTLEMFSYPSGAQLHAGHWFNYGPTDSWARLKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  Y+
Sbjct: 91  KTGIHPKDSTFKNIETMEKQLKSMGAMFNWENEVVTCSPDYYKWTQWLFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V   +   +FF+++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVVDG----LCERCESEVIKKDLTQWFFKITDYADELLDKLD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYV 230
                      +   +           +   + ++ +     D    + YV
Sbjct: 207 GLDWPEKTKSMQKHWVGRSYGAQVTFKVKDSSLEFDVFTTRVDTLNGVTYV 257



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 111/383 (28%), Gaps = 53/383 (13%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + +E G            L Y             + E            
Sbjct: 422 QRYWGAPIPVIYCDECGIVPVPEKDLPVELPYNVEFTPDGKSPLGKCEEFINTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+       +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKREADTLDTFVCSSWYYLRY--------PDNKNTDAPFDPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLKFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K    A   + I   +     +I    +     
Sbjct: 594 FGADVFRMYLMFGFAYVEGGAWSDDGVKSV--ARFVDRIERTLESCRDIINASENIKTTI 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +          ++ + E+ +    + A+A+++   + + +Y  A         
Sbjct: 652 DSEEKDLNFW----RHTAIKGVSEDAEKMQFNTAIARLMEFTNALHKYIQANT------K 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF------------------VAD 481
           NP           E +     LL  F P    + +D+L                   V D
Sbjct: 702 NP-------TFLKETVVDFLKLLAPFAPHFTEEQWDLLGHNSTIFNEKWPEFNPSALVKD 754

Query: 482 ENRCFQSLDQRLKPGFMLHKTFD 504
           E      ++ ++K   M+    D
Sbjct: 755 EVEIAIQVNGKIKAKIMIPSNLD 777


>gi|152979533|ref|YP_001345162.1| isoleucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150841256|gb|ABR75227.1| isoleucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 915

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 22/269 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + Y +        +G++     AD+++ G D     F +    +       P
Sbjct: 515 LDVWFDSGSTYYSVVKSRPEFNGNE-----ADMYLEGSDQHRGWFMSSLMLSTATDNQAP 569

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN++ P EV+++ G D LR ++      G+    D+  
Sbjct: 570 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDE-- 627

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P   A         D   +    R  +E
Sbjct: 628 ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDAVKPEEMISLDRWAVDCALRAQKE 682

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I+E   N   H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 683 IKEAYDNYQFHTVVQRLMKFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEA 742

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCF 486
           L   +   +   A++I+  L        F
Sbjct: 743 LVRWMAPILSFTADEIWGYLPGEHGEFVF 771



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 30  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 89

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D+   T         
Sbjct: 90  VEALVGKPNQKISAAEFREECRKYAREQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 149

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + K    G +YKG     + L   +   + EV  
Sbjct: 150 IRAFGKAVANGHLYKGSKPVHWCLDCASSLAEAEVEY 186


>gi|157826927|ref|YP_001495991.1| valyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166225529|sp|A8GVS7|SYV_RICB8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157802231|gb|ABV78954.1| valyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 812

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 117/335 (34%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-FDWGI-KI 220
           + +   +S         Y   P  +   +R  E    + + +  L +        G  K 
Sbjct: 388 DNWINAISWDWCISRQRYFGVPFPVWYSKRIGEEGKILYADISQLPVDPLKDLPIGYSKY 447

Query: 221 PDDPQ-YIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             +P   +M  W  +  +   +T               K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDLDVMDTWATSSVSPQLSTWGISDEFAVNKDRHGKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAFTESD 387
             G D  Y +D    +    L N + N           +S   K  + +        E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNAAKFVSQHFDKLSDEDKKTNLIDVKEKITHEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN--PDR 443
           + I++    ++      +QN     A+            D Y +  K     + N  P  
Sbjct: 625 QWIINKLVELVNNATNELQNYEYANAMHLTEKFFWSVFCDNYLEISKTRAYDEENKNPSG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSVLTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  IAKDETFVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                      V      FR + + + +S D     +T        
Sbjct: 93  LVEKQRQVKAYNMGREELINICNEVVASEEEKFRSLFNQIALSVDWNLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +  +  KG++Y+      +   D       ++       + N      +  +E
Sbjct: 153 SQMSFLDLVKKGEVYRNNQPILWDPVDGTALAQADIEDKEKTSFMNYITFKTEANDE 209


>gi|323939755|gb|EGB35957.1| isoleucyl-tRNA synthetase [Escherichia coli E482]
          Length = 921

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 424 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 483

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 484 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 538

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 539 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 597

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 598 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 650

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + + +   S      Y
Sbjct: 651 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRQMRFCSVEMGSFY 710

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 711 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 770



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 29  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 88

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 89  VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 148

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 149 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 208

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 209 FGVSNVNGPISLVIWTTTPWTLPANR 234


>gi|301648410|ref|ZP_07248146.1| isoleucine--tRNA ligase [Escherichia coli MS 146-1]
 gi|307136628|ref|ZP_07495984.1| isoleucyl-tRNA synthetase [Escherichia coli H736]
 gi|331640473|ref|ZP_08341621.1| isoleucine--tRNA ligase [Escherichia coli H736]
 gi|301073545|gb|EFK88351.1| isoleucine--tRNA ligase [Escherichia coli MS 146-1]
 gi|315616199|gb|EFU96818.1| isoleucyl-tRNA synthetase [Escherichia coli 3431]
 gi|331040219|gb|EGI12426.1| isoleucine--tRNA ligase [Escherichia coli H736]
          Length = 938

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + + +   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRQMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|325292070|ref|YP_004277934.1| Isoleucyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325059923|gb|ADY63614.1| Isoleucyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 967

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+   +  T     +        WPAD+++ G D     FH+    + 
Sbjct: 564 WQQVMDILDVWFDSGCTHTFTLEDRPDMK------WPADVYLEGSDQHRGWFHSSLLESC 617

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    V     +  +G K SKSLGNV+ P +V++E G D LR +++      +D
Sbjct: 618 ATRGRAPYNAVVTHGFTMDEQGRKQSKSLGNVVAPQDVMKESGADILRLWVMTTDY-WED 676

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N V   +  +  D    I       E ++ +L   S + 
Sbjct: 677 QRLGKAIIQ--TNIDAYRKLRNTVRWMLGTLAHDKGEEI-AYADLPELEKLVLHRLSELD 733

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +R+        +    +I   + E+   YFD +K   L    P   +    L V  ++
Sbjct: 734 KVVRDGYDAFDFKKIARALIDFANVELSAFYFDIRKD-TLYCDAPSSLKRRASLSVIAKL 792

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L   L   +P    + +
Sbjct: 793 FDCLVTWLAPMLPFTTEEAW 812



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 74/230 (32%), Gaps = 27/230 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           + A                    + F     +   +    L I  D     T    H   
Sbjct: 113 EEAYRAKGKNKDEVPVNEFRKECREFAAGWIKVQSEEFKRLGIEGDFENPYTTMNFHAEA 172

Query: 107 RILWKKIS--DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           RI  + +     G +Y+G     +S+ +     + EV              PV+      
Sbjct: 173 RIAGELLKIAKSGQLYRGSKPIMWSVVERTALAEAEVEYHDVESDMIWVKFPVK------ 226

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                +     +     +   + +P  R     S V+ GL ++  ++  F
Sbjct: 227 ---DAAPALSGVSVVIWTTTPWTIPGNRAIAFSSRVEYGLFEVESAQNDF 273


>gi|223888688|ref|ZP_03623279.1| leucyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885504|gb|EEF56603.1| leucyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 840

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 132/390 (33%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAF--------LLSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGCVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P           I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKENPP--------REIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|110632786|ref|YP_672994.1| isoleucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110283770|gb|ABG61829.1| Isoleucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 985

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 96/254 (37%), Gaps = 17/254 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +  T              WPAD+++ G D     FH+    +       
Sbjct: 572 ILDVWFDSGSTHAFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLIESCGTRGRA 625

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V     +  +G K+SKSLGNV+ P +V+ + G D LR +++      +D    ++
Sbjct: 626 PYDTVVTHGFTMDEEGRKMSKSLGNVVVPQDVMAKSGADILRLWVMTTDY-WEDQRLGQN 684

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            L+   N D    + N +   +  +  D    +P      E +  +L     + Q +R  
Sbjct: 685 VLQ--TNIDAYRKLRNTIRWMLGTLAHDEGENVPV-TKMPELERLMLHRLYELDQVVRRG 741

Query: 405 MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAI 460
             N    R    ++    V     YFD +K   L    P   R    + V  ++   L  
Sbjct: 742 YDNFDFKRITRSLLDFMVVELSAFYFDVRKD-ALYCDAPSSVRRKAAMQVVRQLFDCLVT 800

Query: 461 LLQAFVPKLANKIF 474
            L   +P    + +
Sbjct: 801 WLAPMLPFTTEEAW 814



 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 27/64 (42%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   HIGHA   ++ DV+ R  ++ G D  +  G D HG  I   
Sbjct: 52  KGRPLFVLHDGPPYANGNIHIGHALNKVLKDVITRSFQMRGYDSNYVPGWDCHGLPIEWK 111

Query: 62  AQNA 65
            +  
Sbjct: 112 IEEQ 115


>gi|300948627|ref|ZP_07162711.1| isoleucine--tRNA ligase [Escherichia coli MS 116-1]
 gi|300956953|ref|ZP_07169205.1| isoleucine--tRNA ligase [Escherichia coli MS 175-1]
 gi|301024769|ref|ZP_07188407.1| isoleucine--tRNA ligase [Escherichia coli MS 196-1]
 gi|331650915|ref|ZP_08351943.1| isoleucine--tRNA ligase [Escherichia coli M718]
 gi|299880259|gb|EFI88470.1| isoleucine--tRNA ligase [Escherichia coli MS 196-1]
 gi|300316243|gb|EFJ66027.1| isoleucine--tRNA ligase [Escherichia coli MS 175-1]
 gi|300451853|gb|EFK15473.1| isoleucine--tRNA ligase [Escherichia coli MS 116-1]
 gi|331051369|gb|EGI23418.1| isoleucine--tRNA ligase [Escherichia coli M718]
          Length = 938

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 43/360 (11%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
             D GI+   D                    + VW D+ + + +         G      
Sbjct: 501 EVD-GIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            AD+++ G D     F +    +  +    P  + +     +  +G K+SKS+GN + P 
Sbjct: 556 -ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+    D+  + KR     A      +  +   +L + +
Sbjct: 615 DVMNKLGADILRLWVASTDYTGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLN 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +       ++I +  +    H  + + +   S      Y
Sbjct: 668 GFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRQMRFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            D  K  +   K +     +       +   L   +   +   A++++  L    E   F
Sbjct: 728 LDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVF 787



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 15/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV--FVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTC 106
            +             +     R+ A   +D    DFIR            T + +     
Sbjct: 106 VEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                KI   G ++KG     + +   +   + EV                   +     
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F +S     +     +   + LP  R
Sbjct: 226 FGVSNVNGPISLVIWTTTPWTLPANR 251


>gi|24379039|ref|NP_720994.1| isoleucyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81452146|sp|Q8DVD3|SYI_STRMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24376934|gb|AAN58300.1|AE014900_8 isoleucine-tRNA synthetase [Streptococcus mutans UA159]
          Length = 930

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 17/269 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSS------WNGVLNTREDLGYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G + LR ++        D
Sbjct: 572 AVNGHAPYKSVLSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGAEILRLWVASVDT-DSD 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +      +              D+ +L   ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTTDF---NPYINKIAFEDLRSVDKYMLIKFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRA-STVLYVTVE 453
           ++  I     +         V++   V     Y D  K     +   D A   +  V  E
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADE 482
           ++  +  LL   +P  + +I+  L   +E
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEE 776



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  NKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        R     L +S D      T   ++      
Sbjct: 106 AKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWENPYITLVPKYEAAQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  ++DKG IY G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANRV 214


>gi|313890809|ref|ZP_07824434.1| isoleucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120910|gb|EFR44024.1| isoleucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 933

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 104/270 (38%), Gaps = 17/270 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +      +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARDNLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNTILPSDVTKQYGAEILRLWV-TSVDTDND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                D L         + N +  L++ +      + +         + +D+ +    ++
Sbjct: 631 VRVSMDILGQVSETYRKIRNTLRFLIANTSDF---NPNLDTVAFEDLSAADKYMTIKFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYVTVE 453
           +++   +   +         V++   V     Y D  K     +  N  +   +  V  +
Sbjct: 688 LVEVFHKAYNSYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSQQRRAMQTVFYD 747

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
           ++ ++  LL   +P  A +I+  L   +E 
Sbjct: 748 ILVKITKLLTPILPHTAEEIWSYLEFEEEE 777



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFHLHDGPPYANGNIHVGHALNKISKDIIVRAKSMSGYQAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D    T    +     
Sbjct: 105 LAKKGVKRKEMDLAQYLEMCRDYAMSQVEKQREDFKRLGVSADWDKPYITLMPEYEANQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSIYYANKV 214


>gi|310287840|ref|YP_003939098.1| Isoleucyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251776|gb|ADO53524.1| Isoleucyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 1108

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 104/298 (34%), Gaps = 18/298 (6%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++  +  + +L+        G         ++  W ++ +       Y         + 
Sbjct: 546 NVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQH 605

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD  V  IG+    F+ ++  A  L  + P  K V  HG +L   G+K+SK L N  D
Sbjct: 606 FPADYIVEYIGQTRGWFYLLHVMATALF-DRPAFKNVICHGIVLGSDGQKMSKHLRNYPD 664

Query: 313 PIEVIEEVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +     +G++  V   +     +    ++     
Sbjct: 665 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAA 724

Query: 372 D----YDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           +    +D             E D  +L+   R+++ + +++    I  A       +   
Sbjct: 725 NGGAGFDARQLRADEVAGLPEMDRYLLARTRRLVERVEKSLDEFAISDACDAASDFIDVL 784

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y    +     K +    +        V+     +L    P  +  ++  L   +
Sbjct: 785 TNWYIRNTRD-RFWKED----ANAFNTLYTVLEVFMRVLAPLAPMESESVWRGLTGGE 837



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 69  PPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVD 128

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +        A  +D  ++   +T    + ++    +K
Sbjct: 129 QIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVD--FEHGYKTLNIPYMESVMWAFK 186

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +KG  Y+G     Y  +D+   +  E+   AD
Sbjct: 187 QLYEKGLAYQGYRVLPYCPKDQTPLSAHELRMDAD 221


>gi|227827689|ref|YP_002829469.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584893|ref|YP_002843395.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511516|sp|C3N5S5|SYI_SULIA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511517|sp|C3MVH6|SYI_SULIM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|227459485|gb|ACP38171.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019943|gb|ACP55350.1| isoleucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 1049

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 17/371 (4%)

Query: 131 RDEAYYNDDEVYKGADG--QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFIL 188
           +DE     + V    D      +     ++        F  +     +     +      
Sbjct: 422 KDEMLKEIENVNWIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICEKCNNVIVVGS 481

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIK--IPDDPQYIMYVWIDALTNYLTTTGYLD 246
             +  +  I  V + L    +            +      +  VW D+   +  + G   
Sbjct: 482 REDLESIAIDSVPNDLHRPWIDNVRVKCNKCGGVAKRIADVADVWFDSGVAFFASLGKDW 541

Query: 247 NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKIS 304
                +    P DL + G D L   F ++     +L    P    +     +  +G ++ 
Sbjct: 542 QEKWKELG--PVDLVLEGHDQLRGWFFSLLRSGLILLDKAPYVSVLVHGFMLDEQGREMH 599

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KSLGN ++P  VI+  G D LR +L+R     +D  +    L +    DL       V  
Sbjct: 600 KSLGNYVEPSVVIQRYGRDILRLWLLRNTT-WEDARFSWRAL-ELTKRDLQIIWNTYVFA 657

Query: 365 SVSMILKDYDGMIPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           S+ M L +++ +  T           D  ILS  + +L+++ E+M+N  +H     +I+ 
Sbjct: 658 SMYMNLDNFEPVKYTLDDVIKYAKIEDLWILSRFNSMLKKVNESMKNYKVHEMANYLINF 717

Query: 421 -VSEVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V +V R Y    +     + N      + Y+   +++Q  IL    +P ++ KI+    
Sbjct: 718 LVEDVSRFYIRLIRKRAWIEANTQDKIAMYYILYFILKQWIILASTIIPFISEKIYKSFV 777

Query: 479 V-ADENRCFQS 488
           V   E+   +S
Sbjct: 778 VNPKESVSMES 788



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 67/190 (35%), Gaps = 21/190 (11%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K REK        YP++  PHIG  +  +I D + R+ RL G  V    G D HG  I  
Sbjct: 36  KRREKFLFIDGPPYPSSPTPHIGTIWNKVIKDCILRYERLLGKKVHDQPGYDTHGLPIEV 95

Query: 61  AA------------------QNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEK 100
           A                   +N     K F   N+         + +   ++    T + 
Sbjct: 96  ATERLLGILNKQEIIDKIGVENFINKCKEFALSNATKMTQNFKDVGVFMDWERPYYTLDP 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
            +  +   + KK  +KG + KG     +  R E   +D EV +  D +  +         
Sbjct: 156 SYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETTLSDYEVSEYRDLEDPSIYVKFKIKG 215

Query: 161 EEEGYFFRLS 170
           EE  Y    +
Sbjct: 216 EENRYLLIWT 225


>gi|325913404|ref|ZP_08175771.1| leucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477330|gb|EGC80475.1| leucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 804

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    +
Sbjct: 27  SNKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G 
Sbjct: 87  YAIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +S        ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 147 AYEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLE 202

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++  PI+           G
Sbjct: 203 D-LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/415 (16%), Positives = 142/415 (34%), Gaps = 61/415 (14%)

Query: 98  TEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAY----YNDDEVYKGADGQYY 150
            + R +          K++   GD+ +  + G        +    +N++   K  D    
Sbjct: 340 HDDRDYAFASKFSLPIKEVIKGGDVTQAAFVGDGEHVASGFINGLHNEEAKNKIIDWLEE 399

Query: 151 NAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISF 199
           +         +   + F    Y  + +                    ILP     +    
Sbjct: 400 HKLGKRTVNYKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGT 459

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKF 255
            +S L +L+      D   +        M  W  +   YL      +           K+
Sbjct: 460 PESPLANLTDWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKW 519

Query: 256 WPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSL 307
            P +++V G +    H +Y   +         +    P  K +++ G IL   EK+SKS 
Sbjct: 520 LPVNMYVGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSR 578

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV++P +++EE G D+LR + +          +D +G            I   + R   
Sbjct: 579 GNVVNPDDIVEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWR 629

Query: 368 MILKDYDGMIPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDR 426
           +++ D D           E+D  +  V ++ ++++ E+ +    + A++Q++  V+E   
Sbjct: 630 LMVNDLDVKAVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA-- 687

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                           +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ---------------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|171319741|ref|ZP_02908829.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095013|gb|EDT40036.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 945

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAQHAVPVDEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|209517453|ref|ZP_03266294.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502107|gb|EEA02122.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 945

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDELQFPADLYLEGSDQHRGWFHSSLLTASMLDGRPP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YNALLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D +        + E D   +++   +  +I  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFVQHARPLEDWLEIDRYAVALSENLQNDILT 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
           + +    H  +A++ +  SE     Y D  K   L  T  D  +  +       +   L 
Sbjct: 722 HYEKYEFHPVVAKLQTFCSEDLGGFYLDVLKD-RLYTTAADSVARRSAQTALYHIAHGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            ++  F+   A + + +     E
Sbjct: 781 RVMAPFLSFTAEEAWKVFQPDSE 803



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   L G D ++  G D HG  I   
Sbjct: 54  RGRTKFILHDGPPYANGDIHLGHAVNKILKDMIVKARNLAGFDAVYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMQKARAYATEQIEKQKAGFRRLGVLGDWDNPYKTMNFANEAGEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +++G     +     +   + EV  
Sbjct: 174 LAKIMEKGYVFRGLKPVNWCFDCGSALAEAEVEY 207


>gi|319952591|ref|YP_004163858.1| leucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421251|gb|ADV48360.1| leucyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 1171

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++EK Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D  G    +
Sbjct: 28  SDKEKFYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPMGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISD 115
            A   G         N + +R+  D +  S+D    +RT+   ++   + ++ ++ +
Sbjct: 88  YAIQTGQHPATTTATNIKRYREQLDKIGFSFDWSREVRTSTPEYYKWTQWIFIQLFN 144



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 68/178 (38%), Gaps = 28/178 (15%)

Query: 301  EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            EK+SKS  NV+ P  +  E G D+LR + +      +   ++  G+           +  
Sbjct: 940  EKMSKSKYNVVSPDSICVEYGADSLRLYEMFLGPLEQSKPWNTAGITGTHG--FLKKLWR 997

Query: 361  LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            L     S     +      P   +  D   L    + +++++E+++N   + +++  +  
Sbjct: 998  LYH---SGENGAFYVTNTPPSEGSGED---LKTLHKTIKKVQEDIENFSFNTSVSTFMIA 1051

Query: 421  VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V+E                     S     + EV+  L +L+  + P +A +++  L 
Sbjct: 1052 VNE--------------------LSAQKCTSREVLEALIVLVSPYAPHIAEELWSKLG 1089


>gi|240013385|ref|ZP_04720298.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120456|ref|ZP_04733418.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 929

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 107/296 (36%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  ++ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVPQAEMVEIDRYALVLARQLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +  +       H A+ +++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|326330905|ref|ZP_08197205.1| isoleucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325951263|gb|EGD43303.1| isoleucine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 1106

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 125/403 (31%), Gaps = 21/403 (5%)

Query: 85  DVLDISYDDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           +  + SY    R  +   +      +    K      ++ +        ++D  +    E
Sbjct: 428 ESYNHSYPHCWRCRQPLIYKGVSSWFVEVTKIKDRMLELNQQIRWVPEHIQDGQFGKWLE 487

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
             +           +PV   + +   +                    LP ++        
Sbjct: 488 NARDWSITRNRFWGSPVPVWKSDDPAY--PRLDVYGSFAELERDFGTLPRDKDGNP-DLH 544

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +  + DL         G  +      ++ VW D+ +            +   A  +P D 
Sbjct: 545 RPYVDDLVRPNPDDPTGKSMMRRVSDVLDVWFDSGSMSFAQNHVPFENEEWFAHHFPGDF 604

Query: 261 HV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
            V  IG+    F+ ++  A  L         +     +   G+K+SKSL N  D  EV +
Sbjct: 605 IVEYIGQTRGWFYTLHILATALFDRPAFQSCISHGIVLGSDGQKMSKSLRNYPDVNEVFD 664

Query: 319 EVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
             G DA+R+FL+        +    + G++  V   +     +     +     + +   
Sbjct: 665 RDGADAMRWFLMSSPILRGGNLVVTEQGIRDSVRQVMIPLWNSWYFFQLYANAANLETTG 724

Query: 378 PTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYF--DAQKPW 434
            T       D  +L+     + E+   M +  +  A       +    + Y     ++ W
Sbjct: 725 STEST-DPLDRYVLAKLRDYVAEMTTAMDDYYVAEACEATQRFIDVLTNWYIRRSRERFW 783

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                N D+A+        V+  +  L+   +P    +I+  L
Sbjct: 784 -----NEDKAA--FDTLYTVLETVTRLVAPLLPLTTEEIWRGL 819



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 23/172 (13%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     + D++ R+  + G  V    G D HG      A          
Sbjct: 60  PPFANGLPHYGHLLTGYVKDIVPRYQTMRGKRVERRFGWDTHGLPAELEAMRQLGLKTTD 119

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +        A  +D   D   +T    + ++    +K
Sbjct: 120 EIVEMGIDKFNAASRASVLKYTGEWRDYVTRQARWVDFDNDY--KTLNPDYMESVIWAFK 177

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
            + DKG +Y+      Y  +DE   ++ E+    D              E +
Sbjct: 178 TLYDKGLVYEDFRVLPYCWQDETPLSNHELRMDDDVYKDRQDPAVTVGYELD 229


>gi|325911647|ref|ZP_08174055.1| leucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476633|gb|EGC79791.1| leucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 804

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    +
Sbjct: 27  SNKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G 
Sbjct: 87  YAIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +S        ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 147 AYEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLE 202

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++  PI+           G
Sbjct: 203 D-LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPNNTEKLGEYELFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|323970697|gb|EGB65951.1| anticodon-binding domain-containing protein [Escherichia coli
           TA007]
          Length = 431

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 96/269 (35%), Gaps = 22/269 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + + +         G       AD+++ G D     F +    +  +    P
Sbjct: 24  LDVWFDSGSTHSSVVDVRPEFAGHA-----ADMYLEGSDQHRGWFMSSLMISTAMKGKAP 78

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN + P +V+ ++G D LR ++      G+    D+  
Sbjct: 79  YRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDE-- 136

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   +       ++
Sbjct: 137 ILKR-----AADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQED 191

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I +  +    H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 192 ILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEA 251

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCF 486
           L   +   +   A++++  L    E   F
Sbjct: 252 LVRWMAPILSFTADEVWGYLPGEREKYVF 280


>gi|294789076|ref|ZP_06754315.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482817|gb|EFG30505.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 927

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 99/290 (34%), Gaps = 26/290 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +     D          PADL++ G D     F +            P
Sbjct: 533 MDVWFDSGSTHYSVLKQRDELAH------PADLYLEGSDQHRGWFQSSMLTGCATLGRAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +   G K+SKS+GNV+ P EV  E G D LR +            Y  + 
Sbjct: 587 YKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAN-------TDYSGEL 639

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQE 400
              +        I   +  ++S +  +     P   A       E D   L +  ++ ++
Sbjct: 640 AISKEILKRVTEIYRRIRNTLSFLFANLKDFNPIEDAIPQADMVEIDRYALVLARQLQEK 699

Query: 401 IR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIR 456
           +  E       H A+ +++   SE     Y D  K      K N     +       + R
Sbjct: 700 LAGEYYPRYAFHFAVQELVQFCSEDLGAFYLDILKDRLYTTKANSHARRSAQTALYHITR 759

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            L +L+   +   A + ++++   +E+              ML  +   +
Sbjct: 760 SLVLLMSPILCFTAEEAWELIGGGEEDSVLYHTWHEFP--TMLAASETAL 807



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I   
Sbjct: 46  QGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTLAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRIL 109
            +                + +  +     +     L +  D      T + +        
Sbjct: 106 VEKLHGKDMPHSKFRELCREYATEQIARQKKDFIRLGVVGDWEKPYLTMDFKTEADTVRT 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y G     + L   +   + EV  
Sbjct: 166 LGEIYKAGYLYLGSKPVQFCLDCGSSLAEAEVEY 199


>gi|195941395|ref|ZP_03086777.1| leucyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 840

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 131/390 (33%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P           I S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKENPP--------REITSELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|308235287|ref|ZP_07666024.1| methionyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 291

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 80/293 (27%), Positives = 117/293 (39%), Gaps = 42/293 (14%)

Query: 11  TAIAYPNAQPHIGHAYEM-IIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            A  Y N   HIGH     + +DV AR+ R+ G DVL  +GTDEHG  I   A   GV+ 
Sbjct: 3   VAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEADKEGVSA 62

Query: 70  KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           +   ++ +R        L +SYD F RTT   H    + ++++    G IYKG      S
Sbjct: 63  QELANRYNRVITKDLCDLGLSYDLFTRTTTANHEHVVQEMFRQCLKNGYIYKGTQKVAIS 122

Query: 130 LRDE-----AYYNDDEVYKGADGQYYNAQH------------NPV--------QWMEEEG 164
                     Y        GADG   +               NPV        ++ E E 
Sbjct: 123 PSTGRTLPDRYIEGTCPLCGADGARGDQCDACGNELDPDELINPVSKINGETPRFEETEH 182

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP--- 221
           YF  L A  D  LS+  S   +   +   +  +      +K  +++R   DWGI +P   
Sbjct: 183 YFLDLPALADANLSWLNSRDGWRTNVINFSIGLF---KEVKPRAITRD-IDWGIPVPVEG 238

Query: 222 --DDPQYIMYVWIDALTNYLTTTGYLDNPD--GSKAKFWPAD-----LHVIGK 265
             D+P   +YVW DA+  YL+ +             + W  D      + +GK
Sbjct: 239 WVDNPNKRLYVWFDAVIGYLSASIEWARRQGKPDAWRDWWCDPKSPGYYFMGK 291


>gi|71891825|ref|YP_277554.1| valine tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|90103529|sp|Q493Z9|SYV_BLOPB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71795931|gb|AAZ40682.1| valine tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 957

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 68/409 (16%), Positives = 128/409 (31%), Gaps = 89/409 (21%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
            Y +     ++ M  + ++ R+       +     +    +P + +N +     + L+D 
Sbjct: 369 PYSDRTGTIIEPMLTDQWYIRVKHLTQHAIDAVNLNIINFVPKQYKN-MYFSWMNNLQDW 427

Query: 208 SLSRKTFDWG--IKIPDDPQYIMYV----------------------------WIDALTN 237
            +SR+   WG  I    D    +YV                            W  +   
Sbjct: 428 CISRQ-IWWGHKIPAWYDDNNTIYVGYCEKDIRIKNKLNNNVILHREKDVLDTWFSSSLW 486

Query: 238 YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPKK 289
                G+  N +       P ++ + G DI+ F         +         A +P    
Sbjct: 487 TFAALGWPKNTNLLNVFH-PTNIIISGFDIIFFWIARMIMLTMHFIKNDNGSAQIPFKTV 545

Query: 290 VFSHGFILHKGEKISKSLGNVI-------------------------------------- 311
             +       G+K+SKS GN+I                                      
Sbjct: 546 YITGLIRDELGQKMSKSKGNIIDPIDIIDGISIENLLKKRTKNMLQPQLSKHIINNTIKQ 605

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P  +    G DALR+ LV   + G+D  +D   L      +  N + +  SR V M  K
Sbjct: 606 FPNGIKPH-GTDALRFTLVALASSGRDIHWDMQRL--TGYRNFCNKLWH-ASRFVLMHTK 661

Query: 372 DYDG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDR 426
           + D    +     +F+ +D  I++   + +Q   + ++          +   +     D 
Sbjct: 662 NQDCGISININEKSFSLADRWIITKFHQTVQIFHKKLEIYRFDEIANILHEFIWHQFCDW 721

Query: 427 YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           Y +  KP  L   N        Y  + ++  L  L    +P +  KI+ 
Sbjct: 722 YLELTKP-ILYHGNALELRGTRYTLITLLESLLRLTHPIIPFITEKIWQ 769



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 23/172 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +E   I         Q H+GHA++  I DVL R+ R+ G + L+ TGTD  G      
Sbjct: 35  TSQESYCIMMPPPNITGQLHLGHAFQQTIMDVLIRYQRMQGKNTLWQTGTDHAGIATQML 94

Query: 62  AQN----------AGVTTKVFVDQNSR-----------NFRDMADVLDISYDDFIRTTEK 100
            ++             T    +                  + + + +D     F  T + 
Sbjct: 95  VEHKIYNNTGKTRHDYTRDELIKNIWAWKSQSEQFITYQMKRLGNSVDWKRQRF--TMDT 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
                    + ++  K  IY+G     +  + +   +D EV           
Sbjct: 153 EMSYAVTEAFIRLYRKNLIYRGKRLVNWDCKLQTAISDLEVINKKTKGSIWY 204


>gi|330980484|gb|EGH78587.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 499

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 67/418 (16%), Positives = 129/418 (30%), Gaps = 36/418 (8%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIGH A   + ADV  R  R  G + +  + +D++   + +    
Sbjct: 3   KFIVTITPPTPNGDLHIGHIAGPFLAADVFPRVQRQRGHECVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTE-KRHHDTCRILWKKISDKG-----D 118
             V       +NS         ++I  D+++R  +     +    ++  + D G     D
Sbjct: 63  QDVDPVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGTLRDAGAIECRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY----QD 174
             +           EA+   +  Y GA+      ++       E     R        Q 
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTDLRCKLCGQPSQW 182

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGI--------KIPDDP 224
           K +           P  R   +    +  L            DWG+         +  D 
Sbjct: 183 KNVHRAFLKLAGFKPQLRDRLLGQSWRKPLDSWLRDSLEHLHDWGVTRPGDGGLDLQADG 242

Query: 225 QYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWPA 277
              ++ W   L  Y+       +         ++W +     +H +G D +  HA+ +PA
Sbjct: 243 SCRVHTWFMGLAGYMAAFREHADRVGRPELFRQYWQSGQGTLVHFLGFDCVFSHAVVYPA 302

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            L +      ++ F     L   G  +S S  + I   ++  E  VD+ R +L       
Sbjct: 303 QLTALRDIKVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACVDSARLYLASIAPEE 362

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
            +G +             A           +++    +           +D  +L   
Sbjct: 363 SEGDFRLAQF-------HAWRTEVFSEFFPALLEAGSNRDDHWWSGLCGADAGLLEAL 413


>gi|218249906|ref|YP_002374774.1| leucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226695250|sp|B7J1H9|SYL_BORBZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218165094|gb|ACK75155.1| leucyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 840

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 132/390 (33%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P           I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKENPP--------REIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|15888029|ref|NP_353710.1| isoleucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81496260|sp|Q8UHJ6|SYI_AGRT5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15155647|gb|AAK86495.1| isoleucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 967

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+   +  T     +        WPAD+++ G D     FH+    + 
Sbjct: 564 WQQVMDILDVWFDSGCTHTFTLEDRPDMK------WPADVYLEGSDQHRGWFHSSLLESC 617

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    V     +  +G K SKSLGNV+ P +V++E G D LR +++      +D
Sbjct: 618 ATRGRAPYNAVVTHGFTMDEQGRKQSKSLGNVVAPQDVMKESGADILRLWVMTTDY-WED 676

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N V   +  +  D    I       E ++ +L   S + 
Sbjct: 677 QRLGKAIIQ--TNIDAYRKLRNTVRWMLGTLAHDNGEEI-AYADLPELEKLVLHRLSELD 733

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +R+        +    +I   + E+   YFD +K   L    P   +    L V  ++
Sbjct: 734 KVVRDGYDAFDFKKITRALIDFANVELSAFYFDIRKD-TLYCDAPSSLKRRASLSVIAKL 792

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L   L   +P    + +
Sbjct: 793 FDCLVTWLAPMLPFTTEEAW 812



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 56/173 (32%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           + A                    + F     +   +    L I  D     T    H   
Sbjct: 113 EEAYRARGKNKDEVPVNEFRKECRDFAAGWIKVQSEEFKRLGIEGDFENPYTTMNFHAEA 172

Query: 107 RILWKKIS--DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           RI  + +     G +Y+G     +S+ +     + EV              PV
Sbjct: 173 RIAGELLKIARSGQLYRGSKPIMWSVVERTALAEAEVEYHDVESDMIWVKFPV 225


>gi|55820807|ref|YP_139249.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822708|ref|YP_141149.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820317|sp|Q5M0C5|SYI_STRT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81820480|sp|Q5M4X2|SYI_STRT2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55736792|gb|AAV60434.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738693|gb|AAV62334.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 929

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 572 ANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVTSVDTS-ND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +   +         +  ++  ++ +     PT  A         D+ +   
Sbjct: 631 VRISMDILSQVSES------YRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+  +N         +++ ++ E+   Y D  K     ++       +  TV
Sbjct: 685 FNQLVKNIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L   +E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFENED 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH 201


>gi|294675160|ref|YP_003575776.1| leucine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474189|gb|ADE83578.1| leucine--tRNA ligase [Prevotella ruminicola 23]
          Length = 940

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D +G    +
Sbjct: 28  KNKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRQQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +    +N   +R   D +  S+D    +RT +  ++   +  ++++     
Sbjct: 88  YAIQTGQHPEKTTFENINRYRSQLDKIGFSFDWEREVRTCDPIYYKWTQWAFQRMFKSYF 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       E +
Sbjct: 148 STSSHKAQPTIKLIEHF 164



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 92/222 (41%), Gaps = 41/222 (18%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 675 VDVNIVSADILDIEAFKAWRPDYNNAEFILEDGKYICGWAIE---KMSKSMFNVVNPDMI 731

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G    + +  ++    +D  
Sbjct: 732 VEKYGADTLRLYEMFLGPVEQSKPWDTNGI---------DGCHRFLKKFWNLFQNGFDEG 782

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             TP          L    ++++++  +++    + +++  +  V+E+            
Sbjct: 783 AATPEN--------LKSVHKLIKKVSTDIETFSYNTSISAFMICVNEL------------ 822

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 +         E+++ L IL+  F P +A +++++L 
Sbjct: 823 ---GQQKCKN-----KEMLKTLVILIAPFAPHMAEELWEMLG 856


>gi|260591962|ref|ZP_05857420.1| leucine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536246|gb|EEX18863.1| leucine--tRNA ligase [Prevotella veroralis F0319]
          Length = 970

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 3/140 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  KNKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V   +N   +R+  D +  S+  D  +RT +  ++   +  ++++ +   
Sbjct: 88  YAIQTGQHPEVTTKKNIARYREQLDKIGFSFDWDREVRTCDPHYYHWTQWAFEQMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAYYND 138
             +   +   S   + +  +
Sbjct: 148 DNRLQKAQPISQLVKHFEEE 167



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 86/194 (44%), Gaps = 40/194 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P +++E+ G D LR + +          +D +G+         +G   
Sbjct: 746 EKMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCFR 796

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  ++ +   P+  +        L    ++++++  +++    + A++  +  
Sbjct: 797 FLKKFWKLYQQELNDEEPSKES--------LKSVHKLIKKVTGDIEQFSYNTAISAFMIC 848

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E+ +                + +       E++++L I++  F P +A ++++ L   
Sbjct: 849 VNELSQ---------------QKCAN-----KELLKKLVIVIAPFAPHMAEELWEQLGGE 888

Query: 481 DENRC---FQSLDQ 491
            ++ C   + + D+
Sbjct: 889 TKSVCDAAWPAWDE 902


>gi|157804074|ref|YP_001492623.1| valyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225530|sp|A8EZQ5|SYV_RICCK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157785337|gb|ABV73838.1| valyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 813

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 119/340 (35%), Gaps = 22/340 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS--RKTFDWGIKI 220
           E +   +S             P  +   +R  E    + + +  L +   R       + 
Sbjct: 388 ENWINAISWDWCISRQRCFGVPFPVWYSKRVGEEGKILYADIAQLPVDPLRDLPIGYSRD 447

Query: 221 PDDPQ-YIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             +P   +M  W  +  +   +T               K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDLDVMDTWATSSVSPQLSTHGISDDFAINKNRHDKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP------TPGAFTESD 387
             G D  Y +D    +    L N + N        + K  D                E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNAAKFVSIHLHKLKDQDKKAKLLEVKEIITNEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRA--LAQVISLVSEVDRYFDAQKPWELKKTNPDR-- 443
           + +++    ++  +   +QN     A  L +   L    D Y +  K     + N +   
Sbjct: 625 KWMINKLVELVNAVTNELQNYEYANAMHLTEKFFLAVFCDNYLEISKTRAYDEDNKNLSG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             + +     V++ L  L   F+P +  +++ IL+   E+
Sbjct: 685 QYSSILTLYHVMQTLLKLFAPFMPHITEELYQILYNDKES 724



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  ISKEETYIVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMIGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNAGVTTKVFVDQNS-------------RNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +         + +N                FR + + + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNIGRNKFIQICEEVVASEEEKFRGLLNKIALSVDWSLEYQTISPLSQKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +  +  +G+IY+      +   D       ++    +    N      +  E 
Sbjct: 153 SQMSFLDLVKRGEIYRNDQPILWDPVDGTALAQADIKDTENSSLMNYITFKTEQGEP 209


>gi|114320013|ref|YP_741696.1| isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312139|sp|Q0AAD1|SYI_ALHEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114226407|gb|ABI56206.1| Isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 941

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 26/281 (9%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   + T                PADL++ G D     F +    +  +    
Sbjct: 532 ILDVWFDSGVTHATVLERR------DELQVPADLYLEGSDQHRGWFQSSLLTSVGVRETA 585

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  KG K+SKS GNV+ P +V++ +G D LR ++       +      D
Sbjct: 586 PYKGVLTHGFTVDEKGHKMSKSRGNVVAPQKVMDTLGADILRLWVASSDYSAEMAVS--D 643

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQ 399
           G+ KR            +  +   +L + +G  P      P      D   +     + Q
Sbjct: 644 GILKRT-----ADAYRRMRNTARFLLANLNGFEPAEHAVAPPDMLPLDRWAVDRAYLLQQ 698

Query: 400 EIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVI 455
           ++RE  +    HR    V +   V     Y D  K      T PD  +  +       V 
Sbjct: 699 QVREAYERYEFHRIYQMVHNFCVVDLGGFYLDVIKD-RQYTTKPDSLARRSCQTALWHVA 757

Query: 456 RQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKP 495
             L   L   +   A +I++ L     ++   ++  + L P
Sbjct: 758 EGLVRWLAPIISFTAEEIWEHLPGERSDSVLLETWYEGLFP 798



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + +  +     Y N   HIGHA   I+ D++ +   +DG DV +  G D HG  I    
Sbjct: 47  GKPRFVLHDGPPYANGDIHIGHAVNKILKDIIIKARSMDGYDVPYVPGWDCHGLPIELMV 106

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + F        R+    L +   +D+   T + R      
Sbjct: 107 EKKRGKAGAKVSPRAFRDACREFAASQVDGQREDFKRLGVLGDWDNPYLTMDYRTEADIL 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +I  +G + +G     +     +   + EV  
Sbjct: 167 RALGRIIQRGHVTRGFKPVHWCADCGSALAEAEVEY 202


>gi|116627611|ref|YP_820230.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267791|sp|Q03L88|SYI_STRTD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116100888|gb|ABJ66034.1| Isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278132|gb|ADQ62789.1| Isoleucyl-tRNA synthetase IleS [Streptococcus thermophilus ND03]
          Length = 929

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 572 ANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVTSVDTS-ND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +   +         +  ++  ++ +     PT  A         D+ +   
Sbjct: 631 VRISMDILSQVSES------YRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+  +N         +++ ++ E+   Y D  K     ++       +  TV
Sbjct: 685 FNQLVKNIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L   +E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFENED 777



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH 201


>gi|325989664|ref|YP_004249363.1| leucyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574749|emb|CBZ40405.1| Leucyl-tRNA synthetase [Mycoplasma suis]
          Length = 743

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 5/218 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    HIGH    + +D++AR+ ++ G  VL   G D  G    + 
Sbjct: 39  SKPKFYVLDMFPYPSGAGLHIGHVKGYLASDIVARYKKMKGFSVLHPMGWDSFGLPAEQY 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A         F ++N   FR+    L  SYD     I +++  ++   + L+ ++  +G 
Sbjct: 99  AIQNKADPSTFTEKNISRFREELKSLFFSYDFQNKEINSSDSSYYAITQWLFLQLYRRGL 158

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+Y+G DG++Y+ + N PV   + + +  +++ Y   L 
Sbjct: 159 ATLENKQVNWVEELHTVLANEEIYEGEDGKFYSERGNFPVTTRKLKQWVLKITKYAQALK 218

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                        + + E I   ++   +L +  K+F+
Sbjct: 219 EDLYKLEWTDRIKKIQEEWIGEKEAFKFELKIKGKSFE 256



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 109/356 (30%), Gaps = 52/356 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + +E   F   +         +  + +         E     K 
Sbjct: 355 WVFSRQRYWGEPFPVYYDKEGHIFLEENLPLKLPPFKFIENTKKYDTPLAYYEDWVNFKE 414

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G +    +   +           Y +   I     YL            +    P DL++
Sbjct: 415 GFRRDINTMPNWA------ASSWYFLAYLIKKGDGYLPLNSKEAIDLIERWM--PVDLYI 466

Query: 263 IGKDILRFHAIYWPAFLLSAN---------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            G++    H IY   +    +          P  K V     +   G+K+SKS  N +  
Sbjct: 467 GGQEHATMHLIYARFWYKVIHSVLNLKTVSEPFKKLVNQGMILGSDGKKMSKSKNNYLSV 526

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++E  G D +R  +          ++D      R  +   + I  + S         +
Sbjct: 527 ESLLESFGGDVIRLSVAFLGPLELTQYWDD-----RQLSTFESWIKKIYSYY-HQNSSYF 580

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
              IP             S     ++++  ++Q+   +  +++++   +    Y   Q P
Sbjct: 581 ADNIPEKDN---------SSVLEFIKKVEFSIQSFKFNVLVSELMIFFN----YLKQQSP 627

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
               K+  D       + ++ +  LA       P +A +I+  L    E+    S 
Sbjct: 628 ----KSKVD-----HSIFIQFLSYLA-------PSIAEEIWRELLGNKESVYLSSW 667


>gi|326330779|ref|ZP_08197080.1| valine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325951309|gb|EGD43348.1| valine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 876

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 13/257 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +        G+  +PD   ++ +P DL     +I+R         A L 
Sbjct: 519 DPD-VMDTWATSSLTPQIAGGWEADPD-LFSRVYPMDLCTQSHEIIRTWLFGRIVRAHLE 576

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              +P    + +   +    +K+SKS GNV+ P E++++ G DA+R+        G D  
Sbjct: 577 DGTVPWSHAMIAGWILDPDRKKMSKSKGNVVVPTEILDKFGADAVRWR-AALTRPGMDSP 635

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQ 399
           +D+  +K  V   LA  I N    +   +L +       P A T   D ++++     + 
Sbjct: 636 FDETQMK--VGRRLAMKILN----ASKFVLGNVGAATLNPVAITQPVDCALMARLKETIT 689

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +  +         AL        E  D Y +  K     +       +        +   
Sbjct: 690 KATDAFTAYDYSTALETSEKFFWEFCDDYLELVKERAYDEDGGLATESARATLATALHVQ 749

Query: 459 AILLQAFVPKLANKIFD 475
             LL  F+P +  +++ 
Sbjct: 750 LRLLAPFLPYVTEEVWS 766



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE +Y I T     +   H+GH +     D++ARF R++G  V +  G D++G    +  
Sbjct: 55  RENVYSIDTPPPTVSGSLHVGHVFSYTHPDLIARFQRMNGKSVFYPIGWDDNGLPTERRV 114

Query: 63  QN 64
           QN
Sbjct: 115 QN 116


>gi|281352259|gb|EFB27843.1| hypothetical protein PANDA_021868 [Ailuropoda melanoleuca]
          Length = 1250

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 113/382 (29%), Gaps = 54/382 (14%)

Query: 145  ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN------EVIS 198
                ++    N   W      ++        +     + P    P  R            
Sbjct: 706  HQRTWHAWMDNIRDWCISRQLWWGHRIPAYFITVSDPAVPPGEDPDGRYWVSGRSEAEAR 765

Query: 199  FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
               +    +S  + +   G   P D   ++  W  +     +  G+ +  +     F+P 
Sbjct: 766  EKAAKEFGVSPDKISLQQGKAGPGDED-VLDTWFSSGLFPFSIFGWPNQSE-DLTVFYPG 823

Query: 259  DLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
             L   G DIL F    +      L+  LP  +           G K+SKSLGNVIDP++V
Sbjct: 824  TLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDV 883

Query: 317  IE-------------------------------------EVGVDALRYFLVREIACGKDG 339
            I                                      E G DALR+ L    + G+D 
Sbjct: 884  IHGVSLQGLHDQLLSSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDI 943

Query: 340  FYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRV 397
              D + +         N + N    ++  + K +     +      +  D  I S  +  
Sbjct: 944  NLDVNRILG--YRHFCNKLWNATKFALRGLGKGFVPSPTSEPGDHESLVDRWIRSRLTEA 1001

Query: 398  LQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
            ++   +  Q            S       D Y +  KP  L   +   A          +
Sbjct: 1002 VRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLECLKP-VLNGVDQVVAECARQTLYTCL 1060

Query: 456  RQLAILLQAFVPKLANKIFDIL 477
                 LL  F+P +  ++F  L
Sbjct: 1061 DVGLRLLSPFMPFVTEELFQRL 1082



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 21/155 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +           H+GHA    I D L R+HR+ G   L+  G D  G       +   
Sbjct: 337 FMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396

Query: 67  V-----------------TTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
                                 + ++           L  S D + R   T + +     
Sbjct: 397 WRERGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLD-WNRACFTMDPKLSAAV 455

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
              + ++ ++G IY+      +S    +  +D EV
Sbjct: 456 TEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEV 490


>gi|224533101|ref|ZP_03673701.1| leucine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224511828|gb|EEF82229.1| leucine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 840

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 133/390 (34%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|91202863|emb|CAJ72502.1| strongly similar to isoleucine tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 938

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 102/304 (33%), Gaps = 17/304 (5%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            F K     LS   +    G    +    I  VW ++ +++ +               +P
Sbjct: 508 WFFKDASHFLSQDAQCKKCGSVHFEKEMDIFDVWFESGSSHNSVLR------KRSELEYP 561

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F     P+       P    +     +   GEK+SKS+GN I   +
Sbjct: 562 ADLYLEGTDQHRGWFQLSLIPSVGAWGKAPFKSVLTHGFVVDEMGEKMSKSIGNFISVED 621

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +++E G D LR +          G      L  R  +D    I N     +S +      
Sbjct: 622 ILKEFGADILRLWTSSMDYQHDMGVS--RNLINRC-SDAYRRIRNTFRYLLSNLYDFNPH 678

Query: 376 MIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
               P  A  E D   +     ++++I  N +    H+    + +   V     Y D  K
Sbjct: 679 ENAIPHDALLEIDRWAIHKTQELIKQITVNYETLQFHKVFHSIHNFCAVEMSSFYLDILK 738

Query: 433 P--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              +   K + +R          ++  L  L    +   A +++  +   DE+     L 
Sbjct: 739 DRLYTFAKDSRER-RAAQTALHTILLTLVKLSAPIIVHTAEEVWSNIEFKDEDLWSIHLT 797

Query: 491 QRLK 494
              K
Sbjct: 798 TFPK 801



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++K  +     YP  + HIG     I+ D + RF  ++G D  +  G D HG  I   
Sbjct: 45  TNKKKYILHDGPPYPTGELHIGTGLNKILKDFIVRFFTMEGYDAPYVPGWDCHGLPIEHR 104

Query: 62  AQNAGVT-------------TKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
                 +              K + ++     +     L +  D      T    +    
Sbjct: 105 VMQEVGSEVKHLTKTEIRKKCKKYAEKFVTIQKKQFKALGVLGDWEHPYLTFTPAYEAGV 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ K+ + G +Y+      +  R      + E+     
Sbjct: 165 IEVFAKLVENGYVYRSRKPIHWCTRCATALAEAELEYHDK 204


>gi|20150025|gb|AAM12927.1| MupM [Pseudomonas fluorescens]
          Length = 1030

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 139/414 (33%), Gaps = 67/414 (16%)

Query: 139 DEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVIS 198
            +     +  +     NP+ +   E +F R SA +++L+    +     +P   +     
Sbjct: 378 KQEQIEHNYPHCWRCDNPLIYRTVESWFIRASALREQLVEN--NSQVNWVPEHVKEGRFG 435

Query: 199 FVKSGLKDLSLSRKTFDWG--IKIPDDPQ------------------------------- 225
                 +D ++SR  F WG  I +    Q                               
Sbjct: 436 DWIRNARDWAVSRNRF-WGAPIPVWRCDQCGTVEVMGSIAQIEARSGRKVEDLHVPHIDE 494

Query: 226 ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI--GKDI 267
                            +   W ++      +  Y         + +PAD  V    +  
Sbjct: 495 HRFACQCCEGTMSRVTGVFDCWFESGAMPFASRHYPFENKQEFEQTFPADFIVEYLAQTR 554

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ +   +       P    +     +   G K+SK L N  +P+++++  G DALR 
Sbjct: 555 GWFYTMMVISTGCFEQNPFKNAMCHGVILAKDGRKMSKRLKNYPNPMDLMQTHGSDALRV 614

Query: 328 FLVREIACG-KDGFYDKD---GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF 383
            L+    C  +D  + ++    + +R +    N +     ++ + I +      P     
Sbjct: 615 ALLASPVCKGEDIKFSEESVRDVVRRYHLLFWNCLQ--FYKTFTEIDQFSPSGDPGQPPD 672

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRY---FDAQKPWELKKTN 440
              D  +L   + +  +I+  M++    +  +++   ++ +  +    +  + W     +
Sbjct: 673 NVLDHYLLHELAALESDIKMWMESLDFSKIYSRIEVFINVLSTWHLRLNKARIWRDGLDD 732

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN--RCFQSLDQR 492
             R      V    +   A LL  F+P LA  ++  L  AD    + + S+D++
Sbjct: 733 DKR--QCYEVLHYALSNFARLLAPFMPFLAEAVYTELGYADSVHLQDWPSIDRQ 784



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +          +    PH GH     I DV+ R+  + G  V    G D HG  +   
Sbjct: 36  EGKPVYVFYDGPPFATGLPHYGHILTSYIKDVIPRYQTMLGKQVPRRWGWDCHGLPVEFE 95

Query: 62  AQNAG-----------------VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            + A                     +  V + + ++R   + +   + +D   +T +  +
Sbjct: 96  VEKAMGFKSKRDILEFGVEQFNDECRELVLKYADDWRGFVNRMGRWVDFDGAYKTMDNDY 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++    +K + DKG +Y+G     Y +R +   ++ E
Sbjct: 156 MESVLWGFKTLHDKGHVYEGGKIVPYCVRCQTVLSNFE 193


>gi|312149440|gb|ADQ29511.1| leucyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 840

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 132/390 (33%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNTIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEITSELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|226321243|ref|ZP_03796775.1| leucyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233349|gb|EEH32098.1| leucyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 840

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 126/372 (33%), Gaps = 90/372 (24%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNTIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEITSELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILF 478
           P LA ++++ + 
Sbjct: 745 PHLAEELWEYIG 756


>gi|50288157|ref|XP_446507.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525815|emb|CAG59434.1| unnamed protein product [Candida glabrata]
          Length = 1072

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 105/269 (39%), Gaps = 11/269 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y        +   PA+    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYASQHYPFENTEKFSDRVPANFISEGLDQTRGWFYTLSVLGTHLFG 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            +P    + S   +   G K+SKSL N  DP  V+E+ G DALR +L+       +   +
Sbjct: 583 EVPYKNVIVSGIVLASDGRKMSKSLKNYPDPNIVLEKYGADALRLYLINSPVLKAESLKF 642

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYD---GMIPTPGAFTESDESILSVCSR 396
            ++G+K+ V   L         +   ++++ K  D      P   +    D  IL+    
Sbjct: 643 KEEGVKEVVTKVLLPWWNSYKFLEGQLALLKKTSDVDFKYDPKLSSDNVMDRWILASMQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I + M    ++  + +++  + E+ + Y    +     +   D     L    + +
Sbjct: 703 LVQFIHQEMAVYKLYTVVPKLLHFIDELTNWYIRFNRRRLKGENGVDDCLKALNTLFDAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL--FVADE 482
              A  +  F P LA+ I+  L  ++ +E
Sbjct: 763 FTFARAMAPFTPFLADGIYQRLRAYIPEE 791



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 35  KDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGVPIEHI 94

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V   +  +R     L   I +D+  +T     
Sbjct: 95  IDKKLGIKGKEDVFKYGLDNYNNECRAIVMTYADEWRKTIGRLGRWIDFDNDYKTMYPSF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 155 MESVWWAFKQLHEKGQVYRGFRVMPYSTGLTTPLSNFEAQQNYK 198


>gi|329121488|ref|ZP_08250112.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327469403|gb|EGF14873.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 937

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 107/305 (35%), Gaps = 13/305 (4%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            +  S  + L    K+   G         IM VW D+ + +             K   +P
Sbjct: 513 WWTHSAKELLPEGFKSPYSGKSNFRKETDIMDVWFDSGSTWNGVVKQPREEW--KGMSFP 570

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            DL++ G D     F +    +  ++   P    +     +  +G K+SKS+GNV+ P  
Sbjct: 571 CDLYLEGSDQHRGWFQSSLLTSVAVNGKAPYKALLTHGFTVDGEGRKMSKSVGNVVAPQT 630

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYD 374
           +I   G D +R ++      G D       +K+   +D+   I N     +S +   D +
Sbjct: 631 IINRYGADVMRLWIASSDYQG-DVRLSDKIIKQ--MSDVYRKIRNTYRYLLSNLYDFDVE 687

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
                     E D+  L    +V  ++ +  +N   H     + +   V     Y D  K
Sbjct: 688 KDAIPYNEMEEIDKWALLRLEQVRDQVTKAYKNYEFHVMYHVIHNFCTVDMSAIYLDILK 747

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             +L +   N     +      E++  L  L+   +     +++  +    ++     L+
Sbjct: 748 D-KLYEEVPNSKERRSAQTAIHEILVTLTKLMAPVLAFTTEEVWQAMKHTSKDEKSVHLE 806

Query: 491 QRLKP 495
              + 
Sbjct: 807 NWPEA 811



 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 21/215 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             +     Y N + HIGHA    + D++ R+  ++G +V F  G D HG  I  A     
Sbjct: 52  FVLHDGPPYANGKIHIGHALNKTLKDIIVRYKFMEGNNVNFVPGWDTHGLPIEYAVLKES 111

Query: 66  -----GVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRI 108
                 +T      +     +     + I  +DFIR            T +K        
Sbjct: 112 GEDRANMTPIELRRKCLEYAK---KWIAIQKEDFIRMGVIGDWNNPYVTYDKHLEARQIE 168

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           ++ +++ +G IYKG  + ++    E    + E+              PV+ ++       
Sbjct: 169 VFGEMAKRGYIYKGKKTVYWCANCETALAEAEIEYKESKSPSIYVKFPVRDVKNLLPEGV 228

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                  ++                N    +V   
Sbjct: 229 SKEKAFAVIWTTTPWTIPANQHICVNPKFDYVWVH 263


>gi|297626033|ref|YP_003687796.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921798|emb|CBL56358.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 872

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 13/259 (5%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPA 277
              DP  +M  W  +       TG+  +P+      +P DL     DI+R         A
Sbjct: 515 FMADPD-VMDTWATSSLTPEIVTGWERDPE-LFKLTFPMDLAPQAHDIIRTWLFSRVVRA 572

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 +P  + + S   +    +K+SKS GNV+ P +++++ G DA+R+        G 
Sbjct: 573 HFEFNEVPWARAMISGFVMDPDRKKMSKSKGNVVVPTDILDKYGADAVRWR-AAMARPGL 631

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  +D+  +K  V   LA  + N     + M                  D + ++    V
Sbjct: 632 DSPFDERQMK--VGRRLAMKVLNASRFVLGM-----GEATDPEEITVPVDVAEMTALRAV 684

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           + +  ++++      AL           D Y +  K        P  A++        + 
Sbjct: 685 VAKATKDLEAFDYTSALEVTEEFFWSFCDDYLELVKERAYGAQGPRAAASANASLQLALS 744

Query: 457 QLAILLQAFVPKLANKIFD 475
            +  LL  F+P +  +++ 
Sbjct: 745 VILRLLAPFMPFVTEEVWS 763



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 60/227 (26%), Gaps = 14/227 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H+GH +     DV+AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 60  FSIDTPPPTVSGSLHVGHVFSYTHTDVIARYQRMLGKQVFYPMGWDDNGLPTERRVQNFF 119

Query: 65  ----AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
                         Q      D    + IS  +FI    +      +   +     G   
Sbjct: 120 GVRCDPSVPYDPDFQPPAK-PDAKHQIPISRRNFIDLCRQLTKVDEKAFEQLWHQVGLSV 178

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
                      +    +     +  +         P  W          +    +     
Sbjct: 179 DWKQLYTTIGEETQRISQLAFLRNYERGEAYMAEAPTMWDVTFQTAVAQAELAARDYPGA 238

Query: 181 ESHPEFILP-------IERRNEVISFVKSGLKDLSLSRKTFDWGIKI 220
                F  P          R E++    + +     +R    +G  +
Sbjct: 239 YHRLAFHRPDGEDVFIETTRPELVVSCCALIAHPDDTRYQHLFGTMV 285


>gi|167588272|ref|ZP_02380660.1| valyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 415

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 90/255 (35%), Gaps = 15/255 (5%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLL--S 281
              IM  W  +         + +  +    + +P DL   G DI+R       A     S
Sbjct: 71  ESDIMDTWATSSLTPQIAAAWGEPDEC-CERVFPMDLRPQGHDIIRTWLFSTVARSHLES 129

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
           A LP    + S   +    +K+SKS GNV+ P  +++  G D +RY+         D  +
Sbjct: 130 ACLPWTHAMLSGWILDPDRKKMSKSKGNVVTPAALLDAHGSDGVRYWAALGRPGM-DTAF 188

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +  R    LA  + N+   ++           P        D ++++  ++V+   
Sbjct: 189 DETQM--RNGRRLALKLLNVSKLALGFAQA------PAAPLCEALDRAMIARLAQVVTLA 240

Query: 402 RENMQNQLIHRALAQVISL-VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
                     +A+  + +      D Y +  K     +    RA +        +  L  
Sbjct: 241 TMAFDALDYSKAIEHIEAFLWWYCDDYVELVK--NCARGGDARAFSAHRALAASLSVLQR 298

Query: 461 LLQAFVPKLANKIFD 475
           L   F+P  A + + 
Sbjct: 299 LFAPFLPFAAEECWS 313


>gi|126135780|ref|XP_001384414.1| isoleucyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126091612|gb|ABN66385.1| isoleucyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 1082

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 108/276 (39%), Gaps = 11/276 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         K +PA+    G D     F+ +      L  
Sbjct: 525 EEVFDCWFESGSMPYASNHYPFENKEKFLKAFPANFIAEGLDQTRGWFYTLTVLGTHLFN 584

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP EV+ + G DALR +L+       +   +
Sbjct: 585 TAPYKNVIVTGLVLAADGKKMSKRLKNYPDPSEVLNKYGADALRLYLINSPVVKAETLKF 644

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+K+ V++ L         +  +V +  KD         +       D  +L+    
Sbjct: 645 KEEGVKEVVSSVLLPWFNSYKFLKDAVDIFKKDNGVDFKYDESLVSTNVMDRWMLASIQS 704

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVE 453
           +++ I   MQ   ++  + +++S + E+ + Y   + ++       + D     L    E
Sbjct: 705 LIEFIHTEMQGYRLYTVVPRLLSFIDELTNWYIRFNRRRIKGYGDNDVDDTKKGLNTLAE 764

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+  +  F P L++ IF  +    +    +S 
Sbjct: 765 ALLTLSRAMAPFTPYLSDNIFQRIKGYFKPETLESF 800



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K+           +    PH GH  +  + D++ R+  ++G  V    G D HG  +  +
Sbjct: 37  KDLPPFAFFDGPPFATGTPHYGHLLQSTVKDIIPRYASMNGQYVDRRFGWDTHGLPVEHE 96

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +  G+T+K                     +  +  R  + M   +D+  D   +T   
Sbjct: 97  IDKKLGITSKEDVYAMGIDKYNDECRAIVMRYAGEWRRTVKRMGRWIDMDNDY--KTLYP 154

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++    ++++ +K  +Y+G     YS       ++ E  +   
Sbjct: 155 TFMESVWWAFQQLFEKNAVYRGLRVMPYSTACTTPLSNFEAQQNYK 200


>gi|309803462|ref|ZP_07697556.1| leucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164471|gb|EFO66724.1| leucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 804

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 8/205 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    +
Sbjct: 27  SNKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQ 86

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G 
Sbjct: 87  YAIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGL 146

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +S        ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 147 AYEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLE 202

Query: 179 YYESHPEFILPIERRNEVISFVKSG 203
                 ++  PI+           G
Sbjct: 203 D-LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|213583817|ref|ZP_03365643.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 458

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 22/269 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ +       Y       +     AD+++ G D     F +    +  +    P
Sbjct: 62  LDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFMSSLMISVAMKGKAP 116

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN + P +V+ ++G D LR ++      G+    D+  
Sbjct: 117 YRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDE-- 174

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   +       QE
Sbjct: 175 ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVLDRWAVGCAKTAQQE 229

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I +  +    H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 230 ILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEA 289

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCF 486
           L   +   +   A++I+  L    E   F
Sbjct: 290 LVRWMAPIMSFTADEIWGYLPGEREKYVF 318


>gi|312147934|gb|ADQ30593.1| leucyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 840

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.3 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 127/372 (34%), Gaps = 90/372 (24%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILF 478
           P LA ++++ + 
Sbjct: 745 PHLAEELWEYIG 756


>gi|240079964|ref|ZP_04724507.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268596104|ref|ZP_06130271.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268549892|gb|EEZ44911.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 929

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 105/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  ++ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVPQAEMVEIDRYALVLARQLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +  +       H A+ +++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|332111999|gb|EGJ11976.1| isoleucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 947

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 106/283 (37%), Gaps = 14/283 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +             K     ADL++ G D     FH+    A  L    
Sbjct: 554 ILEVWFDSGSTFWHVLRGQHPEGFHKQGP-EADLYLEGHDQHRGWFHSSLLLACALYGRA 612

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  +G K+SKSLGN I+P +V   +G + +R ++      G       D
Sbjct: 613 PYRGLLTHGFTVDSQGRKMSKSLGNGIEPQKVSSTLGAEIIRLWVAASDYSGDIA--GDD 670

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            +  RV  D    I N + R +     D+D       P    E D   L+  + +  EI 
Sbjct: 671 KILARV-VDAYRRIRNTL-RFLLANTSDFDAKADAVAPEELLEIDRWALARTAELQAEIL 728

Query: 403 ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQL 458
           ++ +    H  +A++    SE     Y DA K   L  T P   +  +     V + + +
Sbjct: 729 KHYEVYEFHPVVAKLQVFCSEDLGAFYLDALKD-RLYTTAPKSLARRSAQTALVTITQAM 787

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHK 501
              +  F+   A + + I+   +       LD       +L K
Sbjct: 788 LRWMAPFLSFTAEEAWKIVGTTESIFTETYLDFPEPDAALLAK 830



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 12/201 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   H+GHA   ++ D++ +  +L G D  +  G D HG  I  A 
Sbjct: 55  GKPLFVLHDGPPYANGAIHMGHAVNKVLKDMIVKARQLKGFDAQYVPGWDCHGLPIENAI 114

Query: 63  QNAGVTT----------KVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRILW 110
           +                + +  +           L +  D   R  T +  +       +
Sbjct: 115 EKKHGRHLSRDDMQAKSRAYATEQIALQMADFKRLGVLGDWEHRYATMDPANEAGEIRAF 174

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
           K++ ++G +Y+G    ++     +   + E+              P    ++    F L 
Sbjct: 175 KRVIERGFVYRGLKPVYWCFDCGSSLAEFEIEYADKKSQTLDVAFPAAEPDKLAAAFGLP 234

Query: 171 AYQDKLLSYYESHPEFILPIE 191
           A          +   + +P  
Sbjct: 235 AIAKPAFIVIWTTTAWTIPAN 255


>gi|91205324|ref|YP_537679.1| valyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123388130|sp|Q1RJ74|SYV_RICBR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|91068868|gb|ABE04590.1| Valyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 812

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 117/335 (34%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-FDWGI-KI 220
           + +   +S         Y   P  +   +R  E    + + +  L +        G  K 
Sbjct: 388 DNWINAISWDWCISRQRYFGVPFPVWYSKRIGEEGKILYADISQLPVDPLKDLPIGYSKY 447

Query: 221 PDDPQ-YIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             +P   +M  W  +  +   +T               K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDLDVMDTWATSSVSPQLSTWGISDEFAVNKDRHGKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAFTESD 387
             G D  Y +D    +    L N + N           +S   K  + +        E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNAAKFVSQHFDKLSDEDKKTNLIDVKEKITHEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN--PDR 443
           + I++    ++      +QN     A+            D Y +  K     + N  P  
Sbjct: 625 QWIINKLVELVNNATNELQNYEYANAMHLTEKFFWSVFCDNYLEISKTRAYDEENKNPSG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSVLTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 15/177 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  IAKDETFVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                      V      FR + + + +S D     +T        
Sbjct: 93  LVEKQRQVKAYNMGREEFINICNEVVASEEEKFRSLFNQIALSVDWNLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +  +  KG++Y+      +   D       ++       + N      +  +E
Sbjct: 153 SQMSFLDLVKKGEVYRNNQPILWDPVDGTALAQADIEDKEKTSFMNYITFKTEANDE 209


>gi|206561062|ref|YP_002231827.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|254782376|sp|B4E8Z7|SYI_BURCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|198037104|emb|CAR53025.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 945

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++   ++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|170697699|ref|ZP_02888787.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170137447|gb|EDT05687.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 945

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|195953150|ref|YP_002121440.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|259511505|sp|B4U8K1|SYI_HYDS0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195932762|gb|ACG57462.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 937

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 81/430 (18%), Positives = 142/430 (33%), Gaps = 26/430 (6%)

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT----TEKRHHDTCR-ILWKK 112
           + K  +        +  +N   +R       I  D  I +     E    DT      + 
Sbjct: 386 LLKEEEILHSYPHCWRCKNPVIYRATPQWF-IGVDRAITSHFASCEDEKIDTSDVKKLQN 444

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAY 172
            S +    +  Y+  +  +         +    D      +     W      F+     
Sbjct: 445 KSIREKAIEETYNVKWVPKTGQNRMLSMLQNRPDWCISRQRF----WGVPITIFYCKRCG 500

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWI 232
           +  L S+   H   I           F K   + L         G K       I+ VW 
Sbjct: 501 EPLLESHIFEHVAKIFESSPYGADEWFKKDEKELLPPDTVCKKCGSKDFVKETDILDVWF 560

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKV 290
           D+ +++ +                 AD+++ G D     F A    +       P    V
Sbjct: 561 DSGSSHASVLRPRGIEK--------ADVYLEGSDQHRGWFQASLLESIASYGEAPFKSVV 612

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
                +  KG K+SKS GNVI P+E+I+E G D LR +++ E    +D    K  LK+  
Sbjct: 613 THGFTVDEKGHKMSKSQGNVISPLEIIKEYGADILRLWVISEDY-TEDIKLGKSILKRL- 670

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
            A+    I N +   +  +          P      D  + +  S+V +E+    +N   
Sbjct: 671 -AEDYKKIRNTLRYCLGNLYDFKYEFSIAPDKLHHFDRYMYAYASKVFEELFSFYKNYQY 729

Query: 411 HRALAQVISLV--SEVDRYFDAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           HR   +++  V       YFD  K    + K+      +   V   +++ L ILL   + 
Sbjct: 730 HRFYHRLMEFVSIDLSALYFDVLKDRLYMYKSGSFERLSAQTVLYFLLKNLTILLSPVLS 789

Query: 468 KLANKIFDIL 477
             A + +  +
Sbjct: 790 FTAEETYSYM 799



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 18/208 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   ++G DV +  G D HG  I + 
Sbjct: 43  KGKQLFVLHDGPPYANGNIHIGHALNKILKDIICKVALIEGFDVDYKPGWDCHGLPIEQQ 102

Query: 62  AQNAGVTTKVFVDQNSR-NFRDMA-----DVLDISYDDFIR------------TTEKRHH 103
            +      K+  +   +  FR +        + I  ++F+R            T + ++ 
Sbjct: 103 VEKELKAKKINKESMPKDEFRRLCREYASKFVSIQKEEFLRLGVLGDWENPYLTMDPKYE 162

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEE 163
                   +    G +YKG    ++ + D+    + EV               +    E 
Sbjct: 163 AQEVREIGRCLQNGVLYKGNKPVYWCIYDKTAEAEAEVEYKEKKDISIYVRFELLKQSEN 222

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIE 191
               +L      +     +   + LP  
Sbjct: 223 VLRQKLDLPDKPISIVIWTTTPWTLPAN 250


>gi|170733873|ref|YP_001765820.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254782375|sp|B1JXC3|SYI_BURCC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169817115|gb|ACA91698.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 945

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++   ++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|107023450|ref|YP_621777.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690532|ref|YP_836155.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123071992|sp|Q1BUA1|SYI_BURCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200198|sp|A0K9T5|SYI_BURCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|105893639|gb|ABF76804.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648621|gb|ABK09262.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 945

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++   ++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  QGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|317474659|ref|ZP_07933933.1| leucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909340|gb|EFV31020.1| leucyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 955

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSFY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +   +   E +
Sbjct: 148 CNSCASAKPIAQLIEHF 164



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 77/178 (43%), Gaps = 32/178 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++E+ G D LR + +      +   +D +G+         +G+  
Sbjct: 727 EKMSKSMFNVVNPDMIVEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHR 777

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +  S+    YD           +++  L    ++++++  +++    + +++  +  
Sbjct: 778 FIKKFWSLF---YDRNGNYLVTDEPANKEELKSLHKLIKKVTGDIEQFSYNTSISAFMIC 834

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+E+         + LK +             E++ QL + L  F P +  +++  L 
Sbjct: 835 VNEL---------FALKCSKK-----------EILNQLTVTLAPFAPHVCEELWKTLG 872


>gi|311110527|ref|ZP_07711924.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065681|gb|EFQ46021.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 930

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 115/304 (37%), Gaps = 30/304 (9%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                +++    G K    P         I+ VW D+ ++      +           +P
Sbjct: 500 WYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSS------WAGVMKERDGLGFP 553

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F++    +  ++   P  + +     +  KG K+SKSLGNVI P +
Sbjct: 554 ADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPND 613

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI+++G + +R ++        D    +D L++   +         +  ++  +L +   
Sbjct: 614 VIKQMGAEIIRLWVAGADT-TSDVAVSQDILRQSAES------YRKIRNTMRFMLANTTD 666

Query: 376 MIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
             P          +  D+ +    +R+++E  E       +    +V S +       Y 
Sbjct: 667 FDPKQNSIAYPDMSGVDQYMEIKLNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYL 726

Query: 429 DAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           D  K        + +   ++  V  +V+ +L  L+   +P    +++  L   ++     
Sbjct: 727 DFAKDVLYIDPEDSETRRSMQTVIYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLA 786

Query: 488 SLDQ 491
           ++ +
Sbjct: 787 NMPE 790



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 45  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F  +  +        L +   +D    T + +      
Sbjct: 105 LAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDHPYITLQPKFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  KG IYKG    ++S   E+   + EV              P++
Sbjct: 165 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYHDIKSPRIYVAFPIE 215


>gi|294793183|ref|ZP_06758329.1| isoleucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294794787|ref|ZP_06759922.1| isoleucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294454149|gb|EFG22523.1| isoleucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294456128|gb|EFG24492.1| isoleucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 944

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 128/415 (30%), Gaps = 81/415 (19%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                +     NPV +   E +F  +  Y+ + L   ++  ++I               G
Sbjct: 411 RHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRG 470

Query: 204 LKDLSLSR---------------------------------------------------- 211
              +S  R                                                    
Sbjct: 471 DWVISRQRIWGVPIPIYYCESCGEHIINDDTIKALQEKVALEGSDAWWAHSAKELLPEGF 530

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G         IM VW D+ +++       D          P  +++ G D     
Sbjct: 531 KCPHCGHDEFKKETDIMDVWFDSGSSWAGVLEVNDLEV-------PCAMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A   +   P    +     +  +G K+SKS+GN + P ++I+  G D +R ++
Sbjct: 584 FNSSLLTAVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   D    KD +K+       + +   +  +   +L + D   P        A +
Sbjct: 644 SSADYQA-DVRLSKDIVKQ------LSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYAAMS 696

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTN 440
           E D+  L     V Q++ +  +N   H     + +   V     Y D  K   +   K N
Sbjct: 697 EFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKNN 756

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
             R  +      E+++ L  ++   +   A +++  +   +   E+   Q   Q 
Sbjct: 757 VAR-RSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMPKEEGMRESVMLQDWPQG 810



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 17/205 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N + HIGHA    + D++ ++  + G    +  G D HG  I  A
Sbjct: 45  KDAKPFILHDGPPYANGKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K +  +     +       +   +D    T         
Sbjct: 105 VIKNTGLNRHEMAPLDLRNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ +++ +G IYKG  + ++    E    + E+       +      P  ++ E+   
Sbjct: 165 LGIFGEMAKRGHIYKGLKTVYWCTHCETALAEAEIEYAEKKSFSIYVKFP--YVSEKKVT 222

Query: 167 FRLSAYQDKLLSYYESHPEFILPIE 191
                   +  S   +   + +P  
Sbjct: 223 LPAGVDPKQAYSVIWTTTPWTMPAN 247


>gi|224533700|ref|ZP_03674288.1| leucyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224512993|gb|EEF83356.1| leucyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 840

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 127/372 (34%), Gaps = 90/372 (24%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILF 478
           P LA ++++ + 
Sbjct: 745 PHLAEELWEYIG 756


>gi|225549056|ref|ZP_03770031.1| leucyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370282|gb|EEG99720.1| leucyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 840

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 127/372 (34%), Gaps = 90/372 (24%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIENYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILF 478
           P LA ++++ + 
Sbjct: 745 PHLAEELWEYIG 756


>gi|221217759|ref|ZP_03589227.1| leucyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225550089|ref|ZP_03771049.1| leucyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192436|gb|EEE18655.1| leucyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369201|gb|EEG98654.1| leucyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 840

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 127/372 (34%), Gaps = 90/372 (24%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILF 478
           P LA ++++ + 
Sbjct: 745 PHLAEELWEYIG 756


>gi|216264383|ref|ZP_03436375.1| leucyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980856|gb|EEC21663.1| leucyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 840

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESVKEMQRNWI 230



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 127/372 (34%), Gaps = 90/372 (24%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  +  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   +V++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKVIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILF 478
           P LA ++++ + 
Sbjct: 745 PHLAEELWEYIG 756


>gi|282851660|ref|ZP_06261025.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282557628|gb|EFB63225.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 933

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 115/304 (37%), Gaps = 30/304 (9%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                +++    G K    P         I+ VW D+ ++      +           +P
Sbjct: 500 WYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSS------WAGVMKERDGLGFP 553

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F++    +  ++   P  + +     +  KG K+SKSLGNVI P +
Sbjct: 554 ADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPND 613

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI+++G + +R ++        D    +D L++   +         +  ++  +L +   
Sbjct: 614 VIKQMGAEIIRLWVAGADT-TSDVAVSQDILRQSAES------YRKIRNTMRFMLANTTD 666

Query: 376 MIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
             P          +  D+ +    +R+++E  E       +    +V S +       Y 
Sbjct: 667 FDPKQNSIAYPDMSGVDQYMEIKLNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYL 726

Query: 429 DAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           D  K        + +   ++  V  +V+ +L  L+   +P    +++  L   ++     
Sbjct: 727 DFAKDVLYIDPEDSETRRSMQTVIYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLA 786

Query: 488 SLDQ 491
           ++ +
Sbjct: 787 NMPE 790



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 45  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F  +  +        L +   +D    T + +      
Sbjct: 105 LAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDHPYITLQPKFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  KG IYKG    ++S   E+   + EV              P++
Sbjct: 165 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYHDIKSPRIYVAFPIE 215


>gi|91789567|ref|YP_550519.1| valyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698792|gb|ABE45621.1| valyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 973

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 119/384 (30%), Gaps = 87/384 (22%)

Query: 173 QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYV 230
             K +   ES     +P +  N   +     ++D  +SR+   WG  I    D +  +YV
Sbjct: 411 AQKAIDAVESGAVKFVPEQWVNT-YNQWMGNIQDWCISRQ-LWWGHQIPAWYDEEGKVYV 468

Query: 231 WIDAL-------------------TNY-----LTTTGYLDNPDGSKAKFWPADLHVIGKD 266
             D                     T Y       ++            F P+ + V G D
Sbjct: 469 ARDEAEAQQQAPGKKLTRDEDVLDTWYSSALVPFSSMGWPEKTKELDLFLPSSVLVTGYD 528

Query: 267 ILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI------- 317
           I+ F    +       +  +P              G+K+SKS GNV+DP+++I       
Sbjct: 529 IIFFWVARMIMMTTHFTGQVPFHHVYIHGLVKDSHGKKMSKSEGNVLDPVDLIDGIELAP 588

Query: 318 ------------------------------EEVGVDALRYFLVREIACGKDGFYDKDGLK 347
                                            G DALR+      + G+   +D    +
Sbjct: 589 LLDKRSQGLRKPETTPQVRKNTEKEFPAGIPGYGADALRFTFASLASLGRSINFDSKRCE 648

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA--------------FTESDESILSV 393
                +  N + N  +R V M  +  D  +                   F+++D  I S 
Sbjct: 649 G--YRNFCNKLWN-ATRFVLMNCEGQDCGLAEHTKAQCAPGGEFENYLSFSQADRWISST 705

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVT 451
             RV  ++ +   +  +      +   V +   D Y +  K      T+  + +T     
Sbjct: 706 MQRVEADVAKGFADYRLDNVAGSIYQFVWDEFCDWYLEIAKVQIQTGTDAQKRAT-RRTL 764

Query: 452 VEVIRQLAILLQAFVPKLANKIFD 475
           +  +  +  L    +P +  +++ 
Sbjct: 765 IRTLEGVLRLAHPLIPFITEELWQ 788



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 22/174 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +    I           H+GHA+   I D L R+HR+ G + L+  GTD  G       +
Sbjct: 67  KPSFSIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGHNTLWVPGTDHAGIATQIVVE 126

Query: 64  NAGVTT--------------KVFVDQ------NSRNFRDMADVLDISYDDFIRTTEKRHH 103
                               KV+  +       +R  R M D   +S+     T + +  
Sbjct: 127 RQLQGEGKSRHDLGRKNFVAKVWEWKEESGSTITRQMRRMGDS--VSWKHEYFTMDPKMS 184

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 + ++ ++G IY+G     +    ++  +D EV    +  +      P+
Sbjct: 185 TVVTETFVRLYEQGLIYRGKRLVNWDPILKSAVSDLEVESEEEDGFLWHIRYPL 238


>gi|57157191|dbj|BAD83625.1| isoleucyl tRNA synthetase [Entamoeba histolytica]
          Length = 826

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/417 (15%), Positives = 140/417 (33%), Gaps = 67/417 (16%)

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
               +      P+ +     +F  + +++DKL+    S   + +P   R           
Sbjct: 374 HSYPFCWRSDTPLIYRAIPSWFVNVESFKDKLVES--SQQTYWVPENIREGRFENWLRNA 431

Query: 205 KDLSLSRKTFDWG--IKIPDDPQY------------------------------------ 226
           +D ++SR  F WG  I I  D  Y                                    
Sbjct: 432 RDWAISRNRF-WGTPIPIWTDDDYTEFVCVGSVKELEELTGKKVTDLHRESVDNLIIEKN 490

Query: 227 ---------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
                    +   W ++ +     + Y         + +P D    G D     F+++  
Sbjct: 491 GKKLHRISEVFDCWFESGSMPYGQSHYPFENVEQFKENFPGDFIAEGIDQTRGWFYSLIV 550

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +  L    P    V +   +   G+K+SK L N  DP+++I   G DALR  L+   A 
Sbjct: 551 ISTALFGKAPFKNCVVNGLVLASDGKKMSKRLKNYPDPMDMINLYGADALRLSLINSPAV 610

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDESI 390
             +        +++   +L + I      ++  + + +   +            + D  I
Sbjct: 611 RAETV----KFQEKTLKELISTIFLPWFNTLRYLKQSFKPEMKIMAIDKIANMNDMDRWI 666

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVIS-LVSEVDRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +++++RE M+   ++  +  ++  LV+  + Y    +             T   
Sbjct: 667 LSSLMSLVKKVREEMKMFRLYTIITPLVDLLVTLSNWYIRLNRKRFRGGYGEAAQETSCS 726

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
           V    ++ ++IL+  F P  +   +  L     N      +++++      +  +P+
Sbjct: 727 VLYHCLKIMSILMAPFTPFFSEFCYQKLKAFPLNY-----EEKMEESVHFVQIPEPL 778



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 25/256 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R +        +    PH GH     I D + R+    G  V    G D HG  I   
Sbjct: 16  KDRPRFSFYDGPPFATGLPHYGHLLAGTIKDTVCRYAIQTGHRVDRKFGWDTHGLPIEFE 75

Query: 62  AQNA--GVTTKV---------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                   TT+                 V + S  ++ +       I  D   +T +   
Sbjct: 76  IDKLLGIHTTEEVLKLGIPKYNQECRNIVMRYSEEWKKVVWRCGRWIDMDHPYKTMDIDF 135

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ +K  +Y+G     +S       ++ E           A         E
Sbjct: 136 MESVWWVFKQLYEKNLVYRGLKIMPFSTGCCTPLSNFEAGMAYRDVPDPAVTMTFPVNGE 195

Query: 163 EGYFF------RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           E  +F        +   +  L    +        E        ++  +  L  ++K    
Sbjct: 196 ENTYFLAWTTTPWTLPSNLALCVNPNMDYVKFYDETTKHNYYMMECLMPTLPNAKKAKRT 255

Query: 217 GIKIPDDPQYIMYVWI 232
            I+       +   ++
Sbjct: 256 IIEKMKGKDLVGKTYV 271


>gi|319892187|ref|YP_004149062.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161883|gb|ADV05426.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464712|gb|ADX76865.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
          Length = 915

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 102/273 (37%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               Q IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 518 FTKEQDIMDVWFDSGSSHRGVLETRP------ELSFPADMYLEGSDQYRGWFNSSITTSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P  ++++ G D  R ++   +    D
Sbjct: 572 ATRGRSPYKMLLSHGFVMDGEGKKMSKSLGNVIVPDTIVKQKGADIARLWV-SSVDYLAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESILSV 393
                + L      +    +   +  ++  +L + +   P           E D  IL+ 
Sbjct: 631 VRISDEIL------NQVADVYRKIRNTLRFLLGNINDYNPATDRIAEADLLEVDRYILNR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT-NPDRASTVLYV 450
                    ++ ++        +V + ++    + Y D  K     +  N  +  ++  V
Sbjct: 685 LREFTAGTLDHYESFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSMQTV 744

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             E++  +  LL   +P  A +++  +   DE 
Sbjct: 745 LFEILVNMTKLLAPIIPHTAEEVWSHIEQVDEE 777



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I +A
Sbjct: 45  EGQPSFILHDGPPYANGNLHMGHALNKILKDFINRYKTMQGFYTPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R+      +  I               +D+   T +  +     
Sbjct: 105 LTKKGVKRKEMTTAEFRDKCQAFAMEQIDIQKKDFLRLGVNGDFDNPYITLKPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|218131721|ref|ZP_03460525.1| hypothetical protein BACEGG_03342 [Bacteroides eggerthii DSM 20697]
 gi|217986024|gb|EEC52363.1| hypothetical protein BACEGG_03342 [Bacteroides eggerthii DSM 20697]
          Length = 955

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSFY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +   +   E +
Sbjct: 148 CNSCASAKPIAQLIEHF 164



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 78/177 (44%), Gaps = 32/177 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++E+ G D LR + +      +   +D +G+         +G+  
Sbjct: 727 EKMSKSMFNVVNPDMIVEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHR 777

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +  S+    YD           +++  L    ++++++  +++    + +++  +  
Sbjct: 778 FIKKFWSLF---YDRNGNYLVTDEPANKEELKSLHKLIKKVTGDIEQFSYNTSISAFMIC 834

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V+E+         + LK +             E++ QL + L  F P +  ++++ L
Sbjct: 835 VNEL---------FALKCSKK-----------EILNQLTVTLAPFAPHVCEELWETL 871


>gi|162456513|ref|YP_001618880.1| hypothetical protein sce8230 [Sorangium cellulosum 'So ce 56']
 gi|161167095|emb|CAN98400.1| metS [Sorangium cellulosum 'So ce 56']
          Length = 641

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 82/436 (18%), Positives = 153/436 (35%), Gaps = 37/436 (8%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
               +T        S    + +       + R        EV +         + +   +
Sbjct: 208 PELRETVHWWLDMWSVSETLREWISGKEKTWRRAML---SEVLETVMPSVRLDRAHEATY 264

Query: 160 MEEE-GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR---KTFD 215
            E +       S          +   +  L   R       V+  L D    R   +   
Sbjct: 265 KEIKASLPKHKSKLARGKELVVQFGNKADLESGRAILEQHGVRVELVDEWAHRSITRDIG 324

Query: 216 WGIKIPDDPQ---YIMYVWIDALTNYLTTTG---YLDNPDGSKAKFWPAD-----LHVIG 264
           WGI I +DP      +YVW D+L   ++ +         D ++   +  D     +  +G
Sbjct: 325 WGIPITEDPDLAGKTLYVWPDSLIAPISFSKVALRDKGVDPARYADFWRDPEARVVQFLG 384

Query: 265 KDILRFHAIYWPAFLLSANLPLPK----------KVFSHGFILHKGEKISKSLGNVIDPI 314
           +D + F+ +   A  L       +           VF    +L  GEK+SKS GN     
Sbjct: 385 QDNVYFYVLMQGAMWLGTQEDPRRLPAAGELQLTDVFGCFHLLVGGEKMSKSRGNFFTGD 444

Query: 315 EVIEE--VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
           ++++E    VD +RY+L       K   +D + L +R N  LA  +     R +S +   
Sbjct: 445 QLLDEKGYSVDQIRYYLALLSLAEKPSDFDFEKLDER-NKFLAGPMNAAFERPISAVHSK 503

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQK 432
           + G +P         + +++   R++Q     M        L ++ +    ++  F   K
Sbjct: 504 FGGKVPEGALL----DKVVADTVRIVQRYVRAMDRADYPNLLFEIENYARTINSLFTQYK 559

Query: 433 PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
           P + +     R   + Y +  V++ L I+L  FVP+  +++   L +  E    + L   
Sbjct: 560 PHDDRHPEQGRRDAL-YTSFYVLKTLMIMLYPFVPETMDRLRASLRLPPEVFRLEELGTP 618

Query: 493 LKPGFMLHKTFDPIFP 508
           +  G  +     P FP
Sbjct: 619 IPAGHEIGAK-QPYFP 633



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 81/225 (36%), Gaps = 13/225 (5%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLD--GLDVLFTTGTDEHGQK 57
           ++  +++ ++  + Y N   H+GH A   + AD+ AR+ R+     +VL+  GTDEHG  
Sbjct: 18  LRRPKRMVVTAGMPYANGPLHLGHLAGAQLPADIYARWCRMLIGAENVLYVCGTDEHGST 77

Query: 58  IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR----HHDTCRILWKKI 113
              AA  AG+  + ++D+  +  +   +   IS D F  T++        +       + 
Sbjct: 78  SEIAAVQAGLPIREYIDRIQQAQKKTLERYCISLDAFTGTSQPETFPLQRELAHEFLTRF 137

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF------F 167
           S  G + K     W+  +   +  D  V         + +       +  G         
Sbjct: 138 SRNGLLEKRATRQWFDPKMGRFLPDRYVRGRCPNPQCDNEDAYSDECDRCGQQHAPAALL 197

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
              +     +        + L +   +E +    SG +       
Sbjct: 198 NPRSTLSDAVPELRETVHWWLDMWSVSETLREWISGKEKTWRRAM 242


>gi|217076920|ref|YP_002334636.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|254782447|sp|B7IGT1|SYI_THEAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217036773|gb|ACJ75295.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 910

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 15/268 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G    +     + VWID+  ++            SK + +P DL++ G D     F
Sbjct: 506 CPKCGHNEFEKTYDTLDVWIDSGCSFEAVIR-------SKGEKFPVDLYLEGDDQHRGWF 558

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +  + +   +   P    V         G K+SKSLGNVIDP E++++ G D LR ++ 
Sbjct: 559 QSSIFMSVAHTGQAPYKSVVTHGFIKDEHGRKMSKSLGNVIDPKEIVDKYGADILRLWV- 617

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
             I    +    K+ ++++V  ++   I N +   +  +       +         D+  
Sbjct: 618 SSIDFFDNIRVGKNIIQQQV--EVYKKIRNTLRFLLGNLSNFTKNDLVEFDKLLPLDKWA 675

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPW-ELKKTNPDRASTV 447
           L     V+ ++ E+ +     +  + +     V     Y D  K    ++  +     + 
Sbjct: 676 LGRLQEVISQVTEHYEKYEFSKVYSLINRYCTVELSATYLDILKDRLYVEAKDSIYRRSA 735

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
             V   ++  L  +L   +     + + 
Sbjct: 736 QTVMFYILDALIKMLAPVLVFTTEEAYQ 763



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + K  +     Y N   HIG A   I+ D++ R+  + G    +  G D HG  I   
Sbjct: 45  EGKPKFVLHDGPPYANGNIHIGTATNKILKDIVIRYKTMRGYYAPYVPGWDTHGLPIEHR 104

Query: 62  -------------AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K F        R+    L +   +D+   T + ++    
Sbjct: 105 VSVEMGEKIKEMSPVEIRQKCKDFALNFVNIQREQFKRLGVRGDWDNPYLTLDPKYETHI 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             ++K +   G++Y+G    ++    +    + EV   
Sbjct: 165 LNIFKTLVKNGNVYRGNKPVYWCPTCKTALAEAEVEYH 202


>gi|224533428|ref|ZP_03674021.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513390|gb|EEF83748.1| isoleucyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 480

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 90/226 (39%), Gaps = 5/226 (2%)

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
           N      + +   +   G K+SKS  N  DP++VI   G DALR +L+       D    
Sbjct: 13  NTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPVVKADDLKY 72

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSM--ILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
            D   + V  ++   I N  S   +   I K       +       D+ I+S    + + 
Sbjct: 73  SDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIISELESLKKI 132

Query: 401 IRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
           +   +    + +++  ++  + +++ ++  +      K+  D+  +         I+ L 
Sbjct: 133 LNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLM 192

Query: 460 ILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFM-LHKTFD 504
           ILL  F+P +  +I+  L   ++ +    L+   K     ++KT +
Sbjct: 193 ILLAPFIPFITEEIYQNLKTDEDKQSI-HLNDYPKANENFINKTIE 237


>gi|312870902|ref|ZP_07731007.1| leucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872194|ref|ZP_07732267.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092278|gb|EFQ50649.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093592|gb|EFQ51931.1| leucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 804

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G       ++N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTNENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYELFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|303229983|ref|ZP_07316757.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515349|gb|EFL57317.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 944

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 126/417 (30%), Gaps = 81/417 (19%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                +     NPV +   E +F  +  Y+ + L   ++  ++I               G
Sbjct: 411 RHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRG 470

Query: 204 LKDLSLSR---------------------------------------------------- 211
              +S  R                                                    
Sbjct: 471 DWVISRQRIWGVPIPIYYCESCGEHIINDDTIKALQEKVAVEGSDAWWAHSAKELLPEGF 530

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G         IM VW D+ +++                  P  +++ G D     
Sbjct: 531 KCPHCGHDEFKKETDIMDVWFDSGSSWSGVLEVNGLDV-------PCAMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A   +   P    +     +  +G K+SKS+GN + P ++I+  G D +R ++
Sbjct: 584 FNSSLLTAVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   D    KD +K+       + +   +  +   +L + D   P          +
Sbjct: 644 SSADYQA-DVRLSKDIVKQ------LSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYADMS 696

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTN 440
           E D+  L     V Q++ +  +N   H     + +   V     Y D  K   +   K N
Sbjct: 697 EFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKNN 756

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLK 494
             R  +      E+++ L  ++   +   A +++  +   D   E+   Q   Q   
Sbjct: 757 VAR-RSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMPKEDGMPESVMLQDWPQGYP 812



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 66/205 (32%), Gaps = 17/205 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N + HIGHA    + D++ ++  + G    +  G D HG  I  A
Sbjct: 45  KDAKPFILHDGPPYANGKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K +  +   N +       +   ++    T         
Sbjct: 105 VIKNTGLNRHEMAPLDLRNKCKEYALECVENQKQDFIRFGVLGEWERPYLTLRPEFEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ +++ +G IYKG  + ++    E    + E+       +      P  ++ E+   
Sbjct: 165 LGIFGEMAKRGHIYKGLKTVYWCTHCETALAEAEIEYAEKKSFSIYVKFP--YVSEKKVT 222

Query: 167 FRLSAYQDKLLSYYESHPEFILPIE 191
                   +  +   +   + +P  
Sbjct: 223 LPAGVDPKQAFAVIWTTTPWTMPAN 247


>gi|195996675|ref|XP_002108206.1| hypothetical protein TRIADDRAFT_52446 [Trichoplax adhaerens]
 gi|190588982|gb|EDV29004.1| hypothetical protein TRIADDRAFT_52446 [Trichoplax adhaerens]
          Length = 339

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 2/142 (1%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +++K Y+     YP+   H+GH     +++ +A+F ++ G +V+   G D  G     
Sbjct: 11  MNKKKKFYVLPMFPYPSGTLHMGHVRVYAMSNCIAQFRKMQGFNVIHPMGWDAFGLPAEN 70

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           AA         +   N    R     L + +D    I T    ++   + L+ ++ D G 
Sbjct: 71  AALERDYDPITWTYSNIDQMRTQLINLGLDFDWEKEIMTCSPDYYKWTQWLFLRMFDAGL 130

Query: 119 IYKGCYSGWYSLRDEAYYNDDE 140
            Y+      +   D+     ++
Sbjct: 131 AYQRQALVNWDPVDQTVLAKEQ 152


>gi|258593868|emb|CBE70209.1| isoleucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 941

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 125/338 (36%), Gaps = 32/338 (9%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS----GLKDLSLSRKTFD 215
              +    R  A+   ++++Y +H   IL   R  E ++ +       L     +     
Sbjct: 463 YRSDWCISRQRAWGVPIVAFYCAHCGHILADRRIAEHVATMIERTGADLWYTDTAADLLP 522

Query: 216 WGIKIPD-------DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL 268
            G   P+         + I+ VW D+  ++               + WPAD+++ G D  
Sbjct: 523 PGTACPNCKGTDFEKERDILDVWFDSGVSHAAVLE------VRSDQQWPADMYLEGSDQH 576

Query: 269 --RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALR 326
              FH+    A       P    +     +  +G+K+SKSLGNV+ P EVI+  G + LR
Sbjct: 577 RGWFHSSLLTAVGTRGRAPYRAVLTHGFVVDGEGKKMSKSLGNVVAPQEVIDRYGAEILR 636

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS--RSVSMILKDYDGMIPT--PGA 382
            ++  E     D    ++ LK+     LA G   + +  R +   L D+           
Sbjct: 637 LWVAAEDY-RDDIRISEEILKR-----LAEGYRRIRNTCRYLLGCLSDFQPARDALPLNE 690

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTN 440
             E D  IL    R+++ +R+  +    H     + +   V     Y D  K        
Sbjct: 691 LDEIDRFILHRLGRLVERLRQAYETYEFHLLYHGLHNFCAVDLSAMYLDILKDRVYTSAP 750

Query: 441 PDRASTVLYV-TVEVIRQLAILLQAFVPKLANKIFDIL 477
             RA         +++  L  L+   +   A++++ ++
Sbjct: 751 RSRARRAAQTSMYQILDALVRLMAPVLSFTADEVWQVM 788



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 15/196 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+   +     Y N   HIGHA   I+ D + +   + G +  +  G D HG  I    
Sbjct: 46  DRQVWILHDGPPYANGHIHIGHALNKILKDFVVKSKSMFGYNATYVPGWDCHGLPIEHQV 105

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                + K              +  +     R     L +  ++     T +  +  T  
Sbjct: 106 DKNLGSKKTEVSLVEKRQLCREYAARFVDIQRAEFRRLGVLGNWSVPYLTMDYMYEATIV 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+   G  YKG     +         + EV              P+    EE    
Sbjct: 166 RELGKLFGTGAAYKGKKPVHWCASCRTALAEAEVEYADHASPSVYVKFPLTQDVEERLPM 225

Query: 168 RLSAYQDKLLSYYESH 183
                   ++      
Sbjct: 226 LQGRRAYVVIWTTTPW 241


>gi|21541546|gb|AAM61880.1| putative leucyl-tRNA synthetase [Agrobacterium tumefaciens]
          Length = 778

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 118/365 (32%), Gaps = 43/365 (11%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                 Q Y     P+    E G           LL  +        P+ R         
Sbjct: 378 NWSISRQRYWGCPIPIIHCSECGTIPVAEEQLPILLPDHLISEGSGSPLSRD-------- 429

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFWPA 258
               +  +  K    G     DP   M  ++D+      Y + +           K  PA
Sbjct: 430 ----ESWMKAKCPQCGGDAARDPD-TMDTFVDSSWYFLRYPSPSSPNPIDSSLCNKIAPA 484

Query: 259 DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           D+++ G +    H IY             +  + P  +           G K SKSLGNV
Sbjct: 485 DVYIGGIEHATLHLIYSRFITKVLHDLGYIEFDEPFVELYNQGMVNDVHGRKQSKSLGNV 544

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
            DP  V++E G DA+R +L+ +         + +    +        +  L + ++  + 
Sbjct: 545 TDPSVVVQEFGADAVRCYLLFKTTYN--APINWEDSGPQAMRSYLERVCRLFTNNLDRLR 602

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                 I       E D  I       + ++  +++    + A+A ++S+ + +      
Sbjct: 603 SSSAIEICPDDCENEEDREIARQLQLAIGKVTADVERFHFNAAIAAIMSVTNLL------ 656

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQS 488
                 +K           V    +R L  LL  F P ++ +++ +           + +
Sbjct: 657 -----YEKGG----KASPTVLAGSLRLLVRLLAPFAPHISEELWALSGCNSLVAAEPWPT 707

Query: 489 LDQRL 493
           +++RL
Sbjct: 708 INERL 712



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 65/194 (33%), Gaps = 6/194 (3%)

Query: 12  AIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKV 71
              Y +   HIGH     + D LAR     G  VL   G D  G     AA+  G     
Sbjct: 1   MFPYTSGHLHIGHVRNYSMGDTLARMQIARGYSVLHPMGWDSFGLPAENAARKFGTHPAK 60

Query: 72  FVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           F      + +   M      S+ + + T    +    + L+  +  KG IY+     ++ 
Sbjct: 61  FTQDAIDSMKRSMMQLGFGYSWANELATCSPTYVLAQQKLFLDLYRKGLIYRDDTYVYWD 120

Query: 130 LRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILP 189
             ++     ++V  G   +   A    V       +F  + +Y D+LL   ES   +   
Sbjct: 121 PVEQTVLAAEQVIDGKGWRSGAA----VYKRRTPQWFVDIRSYADRLLDDLESLEGWPTS 176

Query: 190 IERRNEVISFVKSG 203
           +            G
Sbjct: 177 VRNIQRNWIGRTEG 190


>gi|294783857|ref|ZP_06749179.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479669|gb|EFG27448.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 933

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 139/433 (32%), Gaps = 27/433 (6%)

Query: 71  VFVDQNSRNFRDMADVLDI--------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           V+ + N    + + +   I        SY    R+            + ++   GD+ + 
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEG-GDLREK 431

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                  +     +  + +    + +          W      F+     ++        
Sbjct: 432 TLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILD 491

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
               ++     N  +      L    L  K    G+K+  +   IM VW D+ +++    
Sbjct: 492 RICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETN-IMDVWFDSGSSHRGVL 550

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              +          P DL++ G D     FH     +   + + P    +        +G
Sbjct: 551 EVWEGLHR------PCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEG 604

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGN + P +VI+  G D LR +    +    D     + +K+   ++    I N
Sbjct: 605 KKMSKSLGNTVAPSDVIKVYGADILRLW-CGSVDYRDDVRISDNIIKQ--MSEAYRRIRN 661

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-- 417
                +      +            E D+  L+    + + + E+      +     +  
Sbjct: 662 TARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHY 721

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +     Y D  K     +K +         V  E++  L  ++   +   A +I++ 
Sbjct: 722 FAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWEN 781

Query: 477 LFVADENRCFQSL 489
           L    E R  +S+
Sbjct: 782 L--PAEAREAESV 792



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 72/221 (32%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA-------GVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                       ++        + +  +     ++    L +  ++D+   T + +    
Sbjct: 108 VVKEVGLAKAREMSPLEIRKRCEEYARKWVGIQKEQFIRLGVLGNWDNPYLTLDPKFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I +KG I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEIE-----YYDHTSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      +      GL  
Sbjct: 223 LLDKIGFNEDAFVLIWTTTPWTLPANVAICLNENFDYGLYK 263


>gi|313891340|ref|ZP_07824956.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313120115|gb|EFR43291.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 937

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 107/305 (35%), Gaps = 13/305 (4%)

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            +  S  + L    K+   G         IM VW D+ + +             K   +P
Sbjct: 513 WWTHSAKELLPEGFKSPYSGKSNFRKETDIMDVWFDSGSTWNGVVKQPREEW--KGMAFP 570

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
            DL++ G D     F +    +  ++   P    +     +  +G K+SKS+GNV+ P  
Sbjct: 571 CDLYLEGSDQHRGWFQSSLLTSVAVNGKAPYKALLTHGFTVDGEGRKMSKSVGNVVAPQT 630

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYD 374
           +I   G D +R ++      G D       +K+   +D+   I N     +S +   D +
Sbjct: 631 IINRYGADVMRLWIASSDYQG-DVRLSDKIIKQ--MSDVYRKIRNTYRYLLSNLYDFDVE 687

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQK 432
                     E D+  L    +V  ++ +  +N   H     + +   V     Y D  K
Sbjct: 688 KDAIPYNEMEEIDKWALLRLEQVRDQVTKAYKNYEFHVMYHVIHNFCTVDMSAIYLDILK 747

Query: 433 PWELKKT--NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
             +L +   N     +      E++  L  L+   +     +++  +    ++     L+
Sbjct: 748 D-KLYEEVPNSKERRSAQTAIHEILVTLTKLMAPVLAFTTEEVWQAMKHTSKDEKSVHLE 806

Query: 491 QRLKP 495
              + 
Sbjct: 807 NWPEA 811



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 21/215 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             +     Y N + HIGHA    + D++ R+  ++G +V F  G D HG  I  A     
Sbjct: 52  FVLHDGPPYANGKIHIGHALNKTLKDIIVRYKFMEGNNVNFVPGWDTHGLPIEYAVLKES 111

Query: 66  -----GVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDTCRI 108
                 +T      +     +     + I  +DFIR            T +K        
Sbjct: 112 GEDRANMTPIELRRKCLEYAK---KWIAIQKEDFIRMGVIGDWNNPYVTYDKHLEARQIE 168

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           ++ +++ +G IYKG  + ++    E    + E+              PV+ ++       
Sbjct: 169 VFGEMAKRGYIYKGKKTVYWCANCETALAEAEIEYKESKSPSIYVKFPVRDVKNLLPEGV 228

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                  ++                N    +V   
Sbjct: 229 SKEKAFAVIWTTTPWTIPANQHICVNPKFDYVWVH 263


>gi|197294242|ref|YP_001798783.1| leucyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853569|emb|CAM11439.1| Leucyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 814

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 85/201 (42%), Gaps = 6/201 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K+++K Y      YP+++  H+GH       D+++RF R+   +V    G D  G    +
Sbjct: 31  KDQKKFYCLDMFPYPSSEGLHVGHIEGYAATDIVSRFKRMQQYNVFHPFGWDSFGLPAEQ 90

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   + F  +N + F+     L   + ++  + T++   +   + ++KK+ +K  
Sbjct: 91  YALKTGKNPRNFTYENIQKFKIQIQRLGKSVDWEKELATSDPYFYKWTQWIFKKLYEKNL 150

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                   ++         ++EV     G +    ++PV   + + +  +++ Y ++LL+
Sbjct: 151 AVLQNVEVYFCPALGTVLANEEVISNDKGLFSERGNHPVIKKQMKQWVLKITDYAERLLA 210

Query: 179 YYESHPEFILPIERRNEVISF 199
                     P   ++  I++
Sbjct: 211 DL---DLVDWPQNVKDMQINW 228



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 84/225 (37%), Gaps = 46/225 (20%)

Query: 257 PADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLG 308
           P DL++ G +    H +Y   +         +S   P  K V     + H   K+SKS G
Sbjct: 539 PVDLYIGGTEHAVGHLLYARFWHKFLYDLGLVSQKEPFQKLVNQGMILGHDHTKMSKSKG 598

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N ++   ++E+ G DALR  ++          +++ GL+         GI   ++R    
Sbjct: 599 NGVNASSMLEKYGADALRLHIMFMGPLEDVKSWNEKGLQ---------GIQRFLNRV--- 646

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
                   + +     + D  +  +  + +Q + ++ +    ++A++Q++  V+ V +  
Sbjct: 647 ------HQMCSFEMIDQKDVFLEKILHQTIQIVTQSYEKLKFNKAISQLMIFVNHVYK-- 698

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                                +T E  +    +L    P L  ++
Sbjct: 699 ------------------SQKITKEQCQIFLQMLNPLTPHLTEEL 725


>gi|172061472|ref|YP_001809124.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254782374|sp|B1YVA4|SYI_BURA4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171993989|gb|ACB64908.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 945

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|225552401|ref|ZP_03773341.1| leucyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371399|gb|EEH00829.1| leucyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 840

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 3/198 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++LYI     YP+A   H+GH       D+  R+  L+G  VL   G D  G      
Sbjct: 33  KEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAENY 92

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N   F+     L  +Y  D  IRT E+ ++   + ++ ++  KG  
Sbjct: 93  AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLA 152

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y      WY         ++E+ + +DG         V+      +  +++ Y ++LL  
Sbjct: 153 YVKEMPVWYCPELGTVLANEEIIQTSDGPKSERGSYNVEKKYLRQWVLKITKYAERLLDD 212

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 213 LEELEWPESIKEMQRNWI 230



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 132/390 (33%), Gaps = 93/390 (23%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +   + F    Y  + +          +P+E  N  +   +      S + ++    IK
Sbjct: 422 YKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENNLPLKLPEIANYKPSGTGESPLSRIK 481

Query: 220 IPDD--------PQYIMYVWIDALTNYLTT---TGYLDNPDGSKAKFW-PADLHVIGKDI 267
              +            M  W  +   YL         +  +  K ++W P DL++ G + 
Sbjct: 482 DWVNVKDMDLIRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEH 541

Query: 268 LRFHAIYWPAFL--------LSANLPLPK-----KVFSHGFILHKG-------------- 300
              H +Y   +         ++   P  K      + S  +    G              
Sbjct: 542 TVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNK 601

Query: 301 --------------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
                          K+SKSL NVI+P ++I+E G D++R + +          ++  G+
Sbjct: 602 FFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKGI 661

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQ 406
                     G+   +++  ++  K+     P         + I+S   + ++++ E+ +
Sbjct: 662 I---------GVFRFLNKIWNLREKELSKDNPP--------KEIISELHKAIKKVTEDTE 704

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               + A++ ++  ++E+ +Y                        + + +   I+L  + 
Sbjct: 705 KLNFNTAISAMMIFINELLKY--------------------EKNYLNIFKPFIIILSPYA 744

Query: 467 PKLANKIFDILFVAD---ENRCFQSLDQRL 493
           P LA ++++ +       +N  +   D+ L
Sbjct: 745 PHLAEELWEYIGELPSLFKNSKWPKFDESL 774


>gi|189485620|ref|YP_001956561.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287579|dbj|BAG14100.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 929

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 127/346 (36%), Gaps = 23/346 (6%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           +         Q       PV + +E G     S   DK+ + +      +       E++
Sbjct: 463 EGRPDWCLSRQRLWGVPIPVFYCKECGEPLLDSKVIDKISALFGEKGSDLWFEVSEKELL 522

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
               +G K LS +  +F          + I+ VW D+  +Y       +     K   +P
Sbjct: 523 KG--TGAKCLSCNSASFK-------KEEDILDVWFDSGVSYEAVLSSGNY----KDLEYP 569

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F     P+  +    P    +     +  +G+K+SKS+GN++    
Sbjct: 570 ADLYIEGSDQHRGWFQTSMIPSVAVKGKSPYKNVLTHGFVVDGQGKKMSKSIGNIVSSDN 629

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I + G D +R ++       +D     + +  R  +D    I N + R +   + D+D 
Sbjct: 630 LINKYGADVVRLWIASSDY-KEDIRISDEII--RGLSDTYRKIRNTI-RFLLGNIGDFDL 685

Query: 376 MIPTP-GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
               P     E+D+  LS   +++       ++   H+A A + +  +      Y D  K
Sbjct: 686 KKALPFKDMQETDKYALSRLQQLISISLAAYESYEFHKAAAAIGNFCTVFLSGFYLDVLK 745

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                 K +     +     +++   +  L+   +   A + +  L
Sbjct: 746 DVLYCDKKDGIERKSAQSAMLKICSVIIRLISPILSFTAEEAWREL 791



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++EK        Y NA  HIG     ++ D + ++  + G  V FT G D HG  I + 
Sbjct: 49  KDKEKFIFHDGPPYANANIHIGTGLNKVLKDFIIKYRSMSGNYVPFTPGWDCHGLPIEQL 108

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                 T K              F  +     +     L +   +D    T + ++    
Sbjct: 109 VLKEMKTDKSKVDRVVFRKQAADFASKFVEIQKSEFKRLGVIADWDHPYLTLDPKYEMFI 168

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++  + +KG IY+     ++    E    D EV  
Sbjct: 169 VKVFGDLVEKGFIYRKKKPVYWCPTCETAMADAEVEY 205


>gi|115352610|ref|YP_774449.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322419|sp|Q0BCK8|SYI_BURCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115282598|gb|ABI88115.1| Isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 945

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|313618588|gb|EFR90560.1| leucyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 803

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++E  Y      YP+    H+GH       D+L+R  R+ G +VL   G D  G    +
Sbjct: 28  KDKENFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A + G   + F   N  NF      L  SY  D  I TT+  ++     +++K+ +KG 
Sbjct: 88  YAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKXXXWIFEKLYEKGL 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+   +  +         ++EV  G   +       PV       +  +++AY D+LL 
Sbjct: 148 AYEAEIAVNWCPALGTVLANEEVIDGKSERGGF----PVFRKPMRQWMLKITAYADRLLD 203

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             E         + +   I   +
Sbjct: 204 DLELVDWPENIKDMQRNWIGRSE 226



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 40/258 (15%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D  K   W P D+++ G +    H +Y   +         +   
Sbjct: 497 WYFLRYIDPNNTEAIADKEKLAGWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTK 556

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +    EK+SKS GNV++P EV+E+ G D LR + +          +++
Sbjct: 557 EPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNE 616

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           +GL+         G    + R   +++   +         T+++ ++      +++ +  
Sbjct: 617 NGLE---------GARKFLDRIWRLLV--TEEGTLAEKVTTDANANLEKAYHHMVKTVTN 665

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   +  ++Q++  ++E  +                   T+    VE       LL 
Sbjct: 666 HYENLRFNTGISQLMIFINEAYK-----------------QDTIPKQYVEGF---VQLLS 705

Query: 464 AFVPKLANKIFDILFVAD 481
              P LA ++++IL   +
Sbjct: 706 PIAPHLAEELWEILGHTE 723


>gi|307132647|ref|YP_003884663.1| isoleucyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306530176|gb|ADN00107.1| isoleucyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 941

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 129/389 (33%), Gaps = 42/389 (10%)

Query: 121 KGCYSGWYSLRDEAYY---NDDEVYKGADGQYYNA--QHNPVQWMEEEGYFFRLSAYQDK 175
           +  Y   +  +    +       V    +G    +  +   VQW+ + G     S   ++
Sbjct: 404 QHSYPCCWRHKSPILFRATPQWFVSMDQNGLRKQSLSEIKGVQWIPDWGQARIESMVANR 463

Query: 176 LLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------ 225
                     + +P+     +  + +    + L +    R     GI+   D        
Sbjct: 464 PDWCISRQRTWGVPMSLFVHKETQALHPRTTELIEAVAKRVE-QDGIQAWWDLNPADLLG 522

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + + +         G       AD+++ G D     F + 
Sbjct: 523 ADAAEYEKVPDTLDVWFDSGSTHASVVDVRPEFSGHA-----ADMYLEGSDQHRGWFMSS 577

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +    P  + +     +  +G K+SKS+GN + P +V++++G D LR ++    
Sbjct: 578 LMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLGADILRLWIGSTD 637

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESIL 391
             G+    D+     + +AD    I N   R +   L  +D       P      D   +
Sbjct: 638 YSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPAQHSVKPEDMVVLDRWAV 693

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVL 448
                   EI E  ++   HR + +++   S      Y D  K  +   K +     +  
Sbjct: 694 GCAKAAQDEIVEAYESYDFHRVVQRLMQFCSIEMGSFYLDIIKDRQYTAKHDSVARRSCQ 753

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +   L   +   +   A++I+  L
Sbjct: 754 TALFHIAEALVRWMAPILSFTADEIWAYL 782



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGNIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T + +     
Sbjct: 106 VEQLVGKPGEKVSAAQFREECRKYAAEQVAGQKKDFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I + G ++KG     +     +   + EV  
Sbjct: 166 IRALGRIIENGHLHKGAKPVHWCADCGSALAEAEVEY 202


>gi|119872529|ref|YP_930536.1| valyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673937|gb|ABL88193.1| valyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 799

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 110/279 (39%), Gaps = 18/279 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLSAN 283
           ++  W D+  +++  +G   + +    + +P   L   G DI+R    Y    A+LL  +
Sbjct: 456 VLDTWFDSSISWMYASGVTKDFNV-FPRVYPHSILRPQGYDIIRTWLYYALLRAYLLFGD 514

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +P      +   +  KGE + KS GNVID +  +E+ G D +R++       G D  Y++
Sbjct: 515 VPFRYVRINGMGLDEKGEAMHKSKGNVIDLLLPVEKYGADPVRFWAAAAGRLGSDYRYNE 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +  R   +    + N+    +S           +  A T  D+++L+    V +    
Sbjct: 575 NMI--REGKEFVTKVWNISRFVLSF------PEPQSKPALTPVDKAVLARLYGVAKRAIS 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQL 458
                 ++     + + +     D Y +  K     +      D  +  ++    V++  
Sbjct: 627 AYNKFDVYEPAHTLYNFIWHEFADHYIELVKSRAYNRDGSYTRDEQNAAVWTLYTVLKYS 686

Query: 459 AILLQAFVPKLANKIF-DILFVADENRCFQSLDQRLKPG 496
             LL   +P + +KI+ +    +  +   +   +  K G
Sbjct: 687 LKLLAPIMPFVTDKIWREAFGRSIHDERLEDPPEEWKEG 725



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 15/145 (10%)

Query: 3   EREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            +    I T   Y  + +PHIG        D++ARF R+ G DV+F    D +G  I   
Sbjct: 34  SKPIFVIDTPPPYLSSNRPHIGQTASYAHFDMIARFLRMRGFDVVFPFYLDRNGLPIEVQ 93

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCR 107
            +                   K  +D+  + F        +S+D + + T    +    +
Sbjct: 94  VEKKYNIVAHEIPREKFLQLCKEELDRYEKEFVTALRRWGLSFDYWPQGTDSPEYRRMTQ 153

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRD 132
             + ++  +G IY+      +  R 
Sbjct: 154 KTFIELWHRGLIYEAERPTPWCPRC 178


>gi|254247426|ref|ZP_04940747.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872202|gb|EAY63918.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 945

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++   ++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAI 460
           + +    H  +A++ +  SE     Y D  K          RA  +       +   L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|34581330|ref|ZP_00142810.1| valyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262715|gb|EAA26219.1| valyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 812

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 118/335 (35%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E +   +S         Y   P  +   +R  E    + + +  L +           K 
Sbjct: 388 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADVTQLPIDPLKDLPMGYSKE 447

Query: 221 PDDPQY-IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY- 274
             +P Y +M  W  +  +   +T  + +          K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGM----IPTPGAFTESD 387
             G D  Y +D    +    L N + N           LK  D              E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNAAKFVFIHFDKLKGEDKKASLLDIKEKITNEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDR 443
           + +++    +++     +QN     A+            D Y +  K     +   NP  
Sbjct: 625 KWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVLCDNYLEISKTRSYDEEHKNPQG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 15/148 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  VAKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNA------GVTTKVFV-------DQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +         +    F+       +     FR + + + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNMDRSEFIKICEEVVESEEEKFRSLFNQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDE 133
            ++ +  +  K +IY+      +   D 
Sbjct: 153 SQMSFLDLVQKEEIYRTNQPILWDPVDG 180


>gi|309810101|ref|ZP_07703947.1| leucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169600|gb|EFO71647.1| leucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 804

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|261415562|ref|YP_003249245.1| leucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372018|gb|ACX74763.1| leucyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327337|gb|ADL26538.1| leucine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 895

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 78/235 (33%), Gaps = 41/235 (17%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K + K Y      YP+    H+GH       D++ R+ R  G +VL   G D  G    +
Sbjct: 29  KSKPKYYCLDMFPYPSGAGLHVGHPEGYTATDIICRYKRSRGFNVLHPMGWDAFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKIS---- 114
            A   G    +   +N  NFR     L +SYD    + TT+ +++   + ++K++     
Sbjct: 89  YAIQTGTHPAITTKKNCDNFRRQIKRLGLSYDWNKEVNTTDPKYYKWTQWIFKRLYGTWF 148

Query: 115 --------------------------------DKGDIYKGCYSGWYSLRDEAYYNDDEVY 142
                                            K   Y      W+    +    ++EV 
Sbjct: 149 DEDQQKGRPIEELPIPADVEAKGKEEVRKYKDGKRLAYYADAQVWWCKHCKIVCANEEVL 208

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
              DG +       V+    + +  R+  Y D+LL   +         + +   I
Sbjct: 209 --NDGSHEKCGTKEVERRNLKQWLMRIPLYGDRLLKGLDKLDWPQGVKDMQKNWI 261



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 110/329 (33%), Gaps = 81/329 (24%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--- 279
           PQ+    W      Y+              K+W P DL+V G +    H +Y   +    
Sbjct: 549 PQWAGSCW--YYLRYIDACNGDAFVAKELEKYWMPVDLYVGGAEHAVLHLLYSRFWHKVL 606

Query: 280 -----LSANLPLPK------------------KVFSHGFILHKGE--------------- 301
                +S + P  K                  KV +       G+               
Sbjct: 607 FDLGLVSTDEPFQKLFNQGMILAFAYEDAAGSKVPTDEVEEKNGKYFKKGTDIELKQIVA 666

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKSL NV++P +V+ + G D+LR + +          +   G++         G+   
Sbjct: 667 KMSKSLKNVVNPDDVVRDYGADSLRLYEMFMGPLDAVKPWQTKGIE---------GMNRF 717

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           + R+   ++ D D             E+I  V  + + ++  +++N   + A++Q++   
Sbjct: 718 LGRAWRSVVGDSDEAPVFVDEAAP--EAIEKVMHQSVIKVTNDIENMSFNTAISQLMIFN 775

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +E            + K +            E       LL  F P +A +++ IL   +
Sbjct: 776 NE------------MMKMDKRYR--------EPCETFVKLLHPFAPHIAEEMWSILGHNE 815

Query: 482 --ENRCFQSLDQRLKPGFMLHKTFDPIFP 508
              N  +   D        +  T + +F 
Sbjct: 816 SLTNVAWPEADH----SKAVENTVEVVFQ 840


>gi|218767582|ref|YP_002342094.1| isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543093|sp|Q9JVY4|SYI_NEIMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121051590|emb|CAM07888.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 929

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 106/306 (34%), Gaps = 30/306 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +  D     M VW D+ + + +           +   WPADL++ G D     F +   
Sbjct: 524 CEHYDKLSDTMDVWFDSGSTHYSVLK------QREELDWPADLYLEGSDQHRGWFQSSML 577

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +      
Sbjct: 578 TGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS--- 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDES 389
                 Y  +    +            +  ++S +  +     P   A       E D  
Sbjct: 635 ----TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRY 690

Query: 390 ILSVCSRVLQEIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
            L +  R+ + +  +       H A+ +++S  SE     Y D  K      K +     
Sbjct: 691 ALVLARRLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARR 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLH 500
           +       + R L +L+   +     + +DI+    E+               K    L 
Sbjct: 751 SAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGAEDSVLFHTWHEFPTINEKAEAELV 810

Query: 501 KTFDPI 506
           K +  I
Sbjct: 811 KKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|68487429|ref|XP_712413.1| probable Isoleucyl-tRNA synthetase [Candida albicans SC5314]
 gi|68487719|ref|XP_712270.1| probable Isoleucyl-tRNA synthetase [Candida albicans SC5314]
 gi|46433644|gb|EAK93077.1| probable Isoleucyl-tRNA synthetase [Candida albicans SC5314]
 gi|46433798|gb|EAK93227.1| probable Isoleucyl-tRNA synthetase [Candida albicans SC5314]
          Length = 1088

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 108/276 (39%), Gaps = 11/276 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y    +      +PA+    G D     F+ +      L  
Sbjct: 530 EEVFDCWFESGSMPYASKHYPFENEKKFLDAFPANFISEGLDQTRGWFYTLTVLGTHLFK 589

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP  V+E+ G DALR +L+       +   +
Sbjct: 590 TAPYQNVIVTGIVLAADGKKMSKRLKNYPDPTLVLEKYGADALRLYLINSPVLRAETLKF 649

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+K+ V++ L         +  +  +  KD         +       D  +L+    
Sbjct: 650 KEEGVKEIVSSVLLPWYNSYKFLKDAADLFKKDNGKDFVYDNSLHSTNVMDRWLLASIQS 709

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVE 453
           +++ I E M    ++  + +++  + ++ + Y   + ++       + +     L   VE
Sbjct: 710 LIKFIHEEMTGYRLYTVVPRLLHFIDDLTNWYIRFNRRRIKGYASEDVEDTQKGLNTLVE 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+  +  F P LA+ I+  + V  +    + +
Sbjct: 770 ALLTLSRAMAPFTPYLADGIYQRIKVYFKQEDLEKI 805



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           ++           +    PH GH     + D++ R+  ++G  V    G D HG  +  +
Sbjct: 42  EDLPPFAFFDGPPFATGTPHYGHILASTVKDIIPRYATMNGYHVERRFGWDTHGLPVEHE 101

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +   +T+K                     + D+  R  + +   +D+  D   +T   
Sbjct: 102 IDKKLNITSKEDVYAMGIDKYNAECRAIVMRYADEWRRTIKRLGRWIDMDNDY--KTLYP 159

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++    +K++ +K  +Y+G     YS       ++ E  +   
Sbjct: 160 EFMESVWWAFKELFNKDAVYRGLRVMPYSTACTTPLSNFEAQQNYK 205


>gi|329956385|ref|ZP_08296982.1| leucine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524282|gb|EGF51352.1| leucine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 960

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
             +   +       EA+
Sbjct: 148 CNEEKQARPIEELTEAF 164



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 91/222 (40%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 691 VDVNIVSNDILDTEAFKAWRPEYETAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 747

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 748 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFYDRNDNY 798

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T      +++  L    ++++++  +++    + +++  +  V+E             
Sbjct: 799 LVTD---EPANKEELKSLHKLIKKVTGDIEQFSYNTSISAFMICVNE------------- 842

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +     E++ +L + L  F P +  ++++ L 
Sbjct: 843 -------LFAMKCSKKEILNRLTVTLAPFAPHVCEELWETLG 877


>gi|327265827|ref|XP_003217709.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 1265

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 66/458 (14%), Positives = 139/458 (30%), Gaps = 27/458 (5%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCR 107
               D  G   A  A  AG   K       ++ ++   ++  S       T K ++  C 
Sbjct: 349 VCPVDASGCFTADVADFAGQYVKDADKNIIKSLKEQGRLVHTS-------TFKHNYPFCW 401

Query: 108 I-----LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
                 ++K +       +           + Y+  D V +   G   N   +   W   
Sbjct: 402 RSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVKEKRFG---NWLRDARDWAIS 458

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPD 222
              ++           + E      +        +       + +         G  +  
Sbjct: 459 RNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGVKVPDLHRESVDNITIPSRCGKGVLR 518

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               +   W ++ +       Y           +PAD    G D     F+ +   +  L
Sbjct: 519 RVSEVFDCWFESGSMPYAQVHYPFENKKEFEDAFPADFIAEGIDQTRGWFYTLLVLSSAL 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDG 339
               P    + +   +   G+K+SK   N  DP  ++   G DALR +L+       ++ 
Sbjct: 579 FGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPTNIVNSYGADALRLYLINSPVVRAENL 638

Query: 340 FYDKDGLKKRVNADL---ANGIGNLVSRSVSMILKDYD-----GMIPTPGAFTESDESIL 391
            + ++G++  +        N    LV   V + LK+              +    D+ IL
Sbjct: 639 RFKEEGVRDVLKDVFLPWYNAYRFLVQNVVILQLKEDGKEFLYNENTVKESNNIMDKWIL 698

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYV 450
           S    ++Q  +  M    ++  + +++  V    + Y    +     +   D     L  
Sbjct: 699 SFTQSLIQFFKVEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGIDDCIMALET 758

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
              V+  +  L+  + P +   ++  L    +  C Q 
Sbjct: 759 LFSVLFSMCKLMAPYTPFITELMYQNLKTLIDPACVQE 796



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 36  KNRPRFTFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S+ ++     L   I +D+  +T     
Sbjct: 96  IDKALGIKGPEDVAKMGIAEYNNNCRGIVMRYSQEWKTSVTRLGRWIDFDNDYKTLYPEF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +T   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 METVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|312173570|emb|CBX81824.1| Isoleucyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 938

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 112/351 (31%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S    +          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVASRPDWCISRQRTWGVPMALFVHKDTEQLHPDSLELMEKVAVRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ +   +                
Sbjct: 501 E-QDGIQAWWDLDARELMGADADNYVKVPDTLDVWFDSGSTSYSVVE----ARPEFGGNA 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    +  +    P  + +     +  +G K+SKSLGN + P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L +  
Sbjct: 615 DVMNKLGADILRLWVASTDYSGE-IAVSDEILKRSADS------YRRIRNTARFLLANLA 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        +I  + +    H  + +++   S      Y
Sbjct: 668 GFNPETDKVKPEEMVVVDRWAVGRALAAQNDIIASYEAYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 728 LDIIKDRQYTAKADGLARRSCQTALWYIAEALVRWMAPIMSFTADEIWGYL 778



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQTIGKPGEKVSAAEFRAACREYAARQVEGQKADFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI   G ++KG     + +   +   + EV  
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCMDCRSALAEAEVEY 202


>gi|269797242|ref|YP_003311142.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269093871|gb|ACZ23862.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 944

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 64/415 (15%), Positives = 127/415 (30%), Gaps = 81/415 (19%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                +     NPV +   E +F  +  Y+ + L   ++  ++I               G
Sbjct: 411 RHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRG 470

Query: 204 LKDLSLSR---------------------------------------------------- 211
              +S  R                                                    
Sbjct: 471 DWVISRQRIWGVPIPIYYCESCGEHIINDDTIKALQEKVAVEGSDAWWAHSAKELLPEGF 530

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G         IM VW D+ +++       D          P  +++ G D     
Sbjct: 531 KCPHCGHDEFKKETDIMDVWFDSGSSWAGVLEVNDLDV-------PCAMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A   +   P    +     +  +G K+SKS+GN + P ++I+  G D +R ++
Sbjct: 584 FNSSLLTAVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   D    KD +K+       + +   +  +   +L + D   P          +
Sbjct: 644 SSADYQA-DVRLSKDIVKQ------LSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYADMS 696

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTN 440
           E D+  L     V Q++ +  +N   H     + +   V     Y D  K   +   K N
Sbjct: 697 EFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKNN 756

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQR 492
             R  +      E+++ L  ++   +   A +++  +   +   E+   Q   Q 
Sbjct: 757 VAR-RSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMPKEEGMRESVMLQDWPQG 810



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N + HIGHA    + D++ ++  + G    +  G D HG  I  A
Sbjct: 45  KDAKPFILHDGPPYANGKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K +  +     +       +   +D    T         
Sbjct: 105 VIKNTGLNRHEMAPLDLRNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ +++ +G IYKG  + ++    E    + E+  
Sbjct: 165 LGIFGEMAKRGHIYKGLKTVYWCTHCETALAEAEIEY 201


>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 933

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 69/448 (15%), Positives = 143/448 (31%), Gaps = 36/448 (8%)

Query: 71  VFVDQNSRNFRDMADVLDI--------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           V+ + N    + + +   I        SY    R+            + ++   GD+ + 
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEG-GDLREK 431

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                  +     +  + +    + +          W      F+     ++        
Sbjct: 432 TLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILD 491

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
               ++     N  +      L    L  K    G+K+  +   IM VW D+ +++    
Sbjct: 492 RICGLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETN-IMDVWFDSGSSHRGVL 550

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              +          P DL++ G D     FH     +   + + P    +        +G
Sbjct: 551 EVWEGLHR------PCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEG 604

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKSLGN + P +VI+  G D LR +    +    D     + +K+   ++    I N
Sbjct: 605 RKMSKSLGNTVSPEDVIKVYGADILRLW-CGSVDYRDDVRISDNIVKQ--MSEAYRRIRN 661

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-- 417
                +      +            E D+  L+    + + + E+      +     +  
Sbjct: 662 TARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHY 721

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +     Y D  K     +K +         V  EV+  L  ++   +   A +I++ 
Sbjct: 722 FAAIDMSAFYLDIIKDRLYTEKKDSIARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWES 781

Query: 477 LFVADENRCFQSL---------DQRLKP 495
             +  E R  +S+         D+ LKP
Sbjct: 782 --IPAETREAESIFLADWYVNNDEYLKP 807



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGETFILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQ 107

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                   K               +  +     ++    L +   +D+   T + R    
Sbjct: 108 VVKEVGVAKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I + G I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIE-----YYDHVSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      +      GL  
Sbjct: 223 LLDKIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYK 263


>gi|116492940|ref|YP_804675.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265596|sp|Q03EY9|SYI_PEDPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116103090|gb|ABJ68233.1| Isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 933

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 106/278 (38%), Gaps = 17/278 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL + G D     F++    + 
Sbjct: 520 FTKENDIMDVWFDSGSSHQGVLA------QRDYLEYPADLVLEGSDQYRGWFNSSLITSV 573

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  K +     +  KG K+SKSLGN I P E+ +++G + +R ++    +    
Sbjct: 574 AVSGKAPYKKVISQGFTLDGKGHKMSKSLGNTIVPDEINKKMGAEIIRLWVSSIDSSSD- 632

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI--PTPGAFTESDESILSVCSR 396
               ++   K   ++    I N V R +     D+D              D  +L   + 
Sbjct: 633 VRVSQENFVKA--SESYKKIRNTV-RYLLANTSDFDPKENGVDYNELRPEDRYMLVQFNE 689

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVE 453
           ++ +IR +  N         +++ +       Y D  K     +  N  +  ++  V  +
Sbjct: 690 LISKIRTSYDNYDFIDIYKTLLNYIITDLSAFYLDFAKDVVYIEPENSLKRRSMQTVFYK 749

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           ++  L  L+   +P  A +I++ L   +E      + +
Sbjct: 750 ILVGLTKLITPILPHTAEEIWEYLREPEEFVQLAEMPE 787



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               G   K             +  +     R     L IS  +D    T          
Sbjct: 105 LTKEGYDRKKMSTADFRKLCHEYALKQVDKQRTDFKRLGISAEWDHPYLTLNPEFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
             + ++++ G IY+G    ++S   E+   + EV   
Sbjct: 165 RTFGRMAELGLIYRGKKPVFWSWSSESAMAEAEVEYH 201


>gi|134296685|ref|YP_001120420.1| isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166200199|sp|A4JH32|SYI_BURVG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134139842|gb|ABO55585.1| Isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 945

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 103/262 (39%), Gaps = 15/262 (5%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A ++    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN IDP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSAQLQTELLG 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ-LAI 460
           + +    H  +A++ +  SE     Y D  K          RA       +  + Q L  
Sbjct: 722 HYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTQGLLR 781

Query: 461 LLQAFVPKLANKIFDILFVADE 482
           +L  F+   A + + +   A +
Sbjct: 782 VLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQN---AGVTTKVFVDQNSRNFRDMADVLDISYDD 93
            +      +     + +      +  +   + +  
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKR 148


>gi|116629831|ref|YP_815003.1| isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095413|gb|ABJ60565.1| Isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 944

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 115/304 (37%), Gaps = 30/304 (9%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                +++    G K    P         I+ VW D+ ++      +           +P
Sbjct: 511 WYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSS------WAGVMKERDGLGFP 564

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F++    +  ++   P  + +     +  KG K+SKSLGNVI P +
Sbjct: 565 ADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPND 624

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI+++G + +R ++        D    +D L++   +         +  ++  +L +   
Sbjct: 625 VIKQMGAEIIRLWVAGADT-TSDVAVSQDILRQSAES------YRKIRNTMRFMLANTTD 677

Query: 376 MIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
             P          +  D+ +    +R+++E  E       +    +V S +       Y 
Sbjct: 678 FDPKQNSIAYPDMSGVDQYMEIKLNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYL 737

Query: 429 DAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           D  K        + +   ++  V  +V+ +L  L+   +P    +++  L   ++     
Sbjct: 738 DFAKDVLYIDPEDSETRRSMQTVIYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLA 797

Query: 488 SLDQ 491
           ++ +
Sbjct: 798 NMPE 801



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 56  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 115

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F  +  +        L +   +D    T + +      
Sbjct: 116 LAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDHPYITLQPKFEAEEI 175

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  KG IYKG    ++S   E+   + EV              P++
Sbjct: 176 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYHDIKSPRIYVAFPIE 226


>gi|56416842|ref|YP_153916.1| isoleucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821279|sp|Q5PAL9|SYI_ANAMM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56388074|gb|AAV86661.1| isoleucine-tRNA ligase [Anaplasma marginale str. St. Maries]
          Length = 1101

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 73/456 (16%), Positives = 149/456 (32%), Gaps = 36/456 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIRTTEKRH 102
               D+ G+  A     AG      VD   R  ++       +    SY    RT     
Sbjct: 367 ICPIDDAGRFTAAVGDFAGQHVFDVVDAVIRQLKEKGLWFATEQCTHSYPHCWRTDTPLI 426

Query: 103 HDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      +    K  +   ++ K        ++   +    +  K      +     PV 
Sbjct: 427 YRATSSWYVEVTKLKARMVELNKEVNWVPEHVQSGQFGKWLDGAKDWSVSRHRFWGAPVP 486

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +   +  +     +                  ++       L   +    T    +
Sbjct: 487 VWRSDDPKYPRTDVYGSIKKVLPDVKALEEDFGPVEDLHRPYIDNLVRPNPDDPTGKSMM 546

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGKDILRFHAIYWP 276
           +   D   ++  W ++ +       Y           +PAD     I +    F+ ++  
Sbjct: 547 RRVPD---VLDCWFESGSMPYAQMHYPFENKEFFDSHFPADFITEYIAQTRGWFYTLFVL 603

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIAC 335
           +  L    P    +     +  KG+K+SK L N  DP+E+ E+ G D++R+ ++   ++ 
Sbjct: 604 STGLFDRHPFKNCICHGVVLDIKGQKLSKRLNNYPDPMEMFEKYGADSVRFTMLSHAVSI 663

Query: 336 GKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDES 389
           G D   D+D  + +     +   I N  S     +  + D M         G     D+ 
Sbjct: 664 GGDLLLDQDGDVVRDTLKSVVKPIWNSYSFFT--VYANSDQMQGRILESLEGITNIMDQY 721

Query: 390 ILSVCSRVLQEIRENMQN--------QLIHRALAQVISLVSEVDRYFD---AQKPWELKK 438
           IL  C+ ++ ++ E M++          I  A A ++    +++ ++      + W   K
Sbjct: 722 ILYECACMVVKVLEAMESSSAGVRDPYNIRLACAAIVQFSDKLNNWYIRGCRGRFWMRDK 781

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           T     S        V+  LA  +  F+P +A  I+
Sbjct: 782 T--ADKSDAYNTLYTVLYHLARTIAPFLPFIAESIW 815



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 23/212 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     I D +AR+  + G  V    G D HG      A+         
Sbjct: 49  PPFANGLPHYGHLLTGFIKDAVARYKTMRGFRVERKFGWDCHGLPAEMLAEKELGVSGKV 108

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   F  Q           +D  +++  RT +K   ++    + 
Sbjct: 109 SIESFGIDKFNDYCRSSIMRFTQQWREYVERQGRWVD--FENGYRTMDKSFMESVMWAFH 166

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           ++  KG +Y+      YS   +   ++ E       +   ++   V++   E   F    
Sbjct: 167 ELWHKGLVYESVKVVPYSWACQTPLSNFETKMDNAYREKVSKSVTVRFKLSEQVGFVPQG 226

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
            +   +  + + P  ++         +    G
Sbjct: 227 VESCSILAWTTTPWTLVSNFALAINTNMDYVG 258


>gi|269137940|ref|YP_003294640.1| isoleucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983600|gb|ACY83429.1| isoleucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557990|gb|ADM40654.1| Isoleucyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 948

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 94/266 (35%), Gaps = 16/266 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ +   +                P D+++ G D     F +    +  +    P
Sbjct: 542 LDVWFDSGSTSYSVVD----ARPEFGGHSP-DMYLEGSDQHRGWFMSSLMISVAMKGKAP 596

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GNV+ P +V+ ++G D LR ++      G+    D+  
Sbjct: 597 YRQVLTHGFTVDGQGRKMSKSVGNVVSPQQVMNKLGGDILRLWVASTDYTGEMAVSDE-- 654

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRE 403
              + +AD    I N   R +   L  +D    +  P      D   +    +   EI  
Sbjct: 655 -ILKRSADAYRRIRNTA-RFLLANLNGFDPRKDMVKPEDMVVLDRWAVGCAKQAQDEIIA 712

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
             +N   H  + +++   S      Y D  K  +   K +     +       +   L  
Sbjct: 713 AYENYDFHEVVQRLMQFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVR 772

Query: 461 LLQAFVPKLANKIFDILFVADENRCF 486
            +   +   A++I+  L        F
Sbjct: 773 WMAPILSFTADEIWGYLPGERAQFVF 798



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 16/166 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +            ++  FR+                        +  + ++   GD   
Sbjct: 106 VEQLIGKPGE--KYSAAEFREQCRAY-----------AAEQVAGQKADFIRLGVLGDWEH 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
              +  Y            +    D  +      PV W  + G   
Sbjct: 153 PYLTMDYGTEANIIRALARI---VDNGHLMKGAKPVHWCPDCGSSL 195


>gi|303230916|ref|ZP_07317660.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514429|gb|EFL56427.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 944

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 126/417 (30%), Gaps = 81/417 (19%)

Query: 144 GADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                +     NPV +   E +F  +  Y+ + L   ++  ++I               G
Sbjct: 411 RHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRG 470

Query: 204 LKDLSLSR---------------------------------------------------- 211
              +S  R                                                    
Sbjct: 471 DWVISRQRIWGVPIPIYYCESCGEHIINDDTIKALQEKVAVEGSDAWWAHSAKELLPEGF 530

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           K    G         IM VW D+ +++                  P  +++ G D     
Sbjct: 531 KCPHCGHDEFKKETDIMDVWFDSGSSWSGVLEVNGLDV-------PCAMYLEGSDQHRGW 583

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A   +   P    +     +  +G K+SKS+GN + P ++I+  G D +R ++
Sbjct: 584 FNSSLLTAVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWV 643

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                   D    KD +K+       + +   +  +   +L + D   P          +
Sbjct: 644 SSADYQA-DVRLSKDIVKQ------LSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYADMS 696

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP--WELKKTN 440
           E D+  L     V Q++ +  +N   H     + +   V     Y D  K   +   K N
Sbjct: 697 EFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKNN 756

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRLK 494
             R  +      E+++ L  ++   +   A +++  +   D   E+   Q   Q   
Sbjct: 757 VAR-RSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMPKEDGMPESVMLQDWPQGYP 812



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 17/205 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+ +   +     Y N + HIGHA    + D++ ++  + G    +  G D HG  I  A
Sbjct: 45  KDAKPFILHDGPPYANGKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                K +  +   N +       +   ++    T         
Sbjct: 105 VIKNTGLNRHEMAPLDLRNKCKEYALECVENQKQDFIRFGVLGEWERPYLTLRPEFEVKQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
             ++ +++ +G IYKG  + ++    E    + E+       +      P  ++ E+   
Sbjct: 165 LGIFGEMAKRGHIYKGLKTVYWCTHCETALAEAEIEYAEKKSFSIYVKFP--YVSEKKVT 222

Query: 167 FRLSAYQDKLLSYYESHPEFILPIE 191
                   +  S   +   + +P  
Sbjct: 223 LPAGVDPKQAYSVIWTTTPWTMPAN 247


>gi|302879260|ref|YP_003847824.1| isoleucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582049|gb|ADL56060.1| isoleucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 943

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 102/286 (35%), Gaps = 18/286 (6%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +      + + VW D+ + +            S  + + ADL++ G D     F +    
Sbjct: 537 EHYKKLTHTLDVWFDSGSTHAAVLALRPELSSSSDR-YLADLYLEGSDQHRGWFQSSLLT 595

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              ++   P    +     +   G K+SKS GNVI P ++ + +G D LR +       G
Sbjct: 596 GCAINGRAPFNALLTHGFVVDGNGHKMSKSKGNVIAPQKIFDTLGADILRLWTASTDYSG 655

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESIL 391
           +      + LK+ V +         +  ++  +L +      T  A       E D   L
Sbjct: 656 E-LTISDEILKRVVES------YRRIRNTLKFLLANISDFDATRDALPVSDWLEIDRYAL 708

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVL 448
            +  ++  E+R + +    H  + +++   SE     Y D  K          RA  +  
Sbjct: 709 HMTQKLQDEVRADYERYEFHLGVQKLLGFCSETLGSFYLDILKDRLYTSGENARARRSAQ 768

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                +   L  L+   +     + F++L   ++   F+ +   L 
Sbjct: 769 NALYHITHALTRLIAPILSFTGEEAFEVLNGRNDQSVFEGVWHELP 814



 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 12/151 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I    + 
Sbjct: 57  PKFILHDGPPYANGDIHIGHAVNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEK 116

Query: 65  AG---VTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKK 112
                +           +  +     +     L +   ++    T + +          +
Sbjct: 117 KHGKAIPPAQFRELCRSYAAEQVERQKKDFIRLGVLGDWNRPYLTMDFKVEADIIRAIGQ 176

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           I D G +Y+G     + L  ++   + EV  
Sbjct: 177 IHDNGYLYQGYKPVNWCLDCQSALAEAEVEY 207


>gi|148826387|ref|YP_001291140.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229846022|ref|ZP_04466134.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166200212|sp|A5UDA6|SYI_HAEIE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148716547|gb|ABQ98757.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229811026|gb|EEP46743.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 941

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 130/400 (32%), Gaps = 46/400 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
            K  Y   +  +    +    + + G + Q    Q       V+W+ + G        ++
Sbjct: 400 IKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVEN 459

Query: 175 KLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQY----- 226
           +          + +P+      E        L  L    K     GI+   D        
Sbjct: 460 RPDWCISRQRTWGVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLG 519

Query: 227 -----------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + Y +        +G        D+++ G D     F + 
Sbjct: 520 ADAETYRKVPDTLDVWFDSGSTYSSVVANRLEFNGQNI-----DMYLEGSDQHRGWFMSS 574

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +    +  P  + +     +  +G K+SKS+GN++ P EV+++ G D LR ++    
Sbjct: 575 LMLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTD 634

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
             G+    D+  + KR     A      +  +   +L + +G  P      P      D 
Sbjct: 635 YTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDR 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
             ++       EI++   N   H  + +++   S      Y D  K  +   K +     
Sbjct: 688 WAVACALDAQHEIKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKASSLARR 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +       +   L   +   +   A++I+  L   +  R 
Sbjct: 748 SCQTALWHIAEALVRWMAPILSFTADEIWQHLPQTESARA 787



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGNIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNEKISAAEFRQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G +YKG     + L   +   + EV              PV+  +E    
Sbjct: 167 IRTLGKVIENGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPVESADEIEAK 226

Query: 167 FRLSAY-QDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      Q KL +   +   + +P  R   V + ++  L  L   R
Sbjct: 227 FSAQGRGQGKLSAIIWTTTPWTMPSNRAIAVNADLEYNLVQLGDER 272


>gi|290474752|ref|YP_003467632.1| isoleucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174065|emb|CBJ80852.1| isoleucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 937

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 126/389 (32%), Gaps = 42/389 (10%)

Query: 121 KGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDK 175
           +  Y   +  +    +       +    +G       +   V+W+   G     S  +++
Sbjct: 400 QHSYPCCWRHKKPIIFRATPQWFISMDQNGLREQSLKEIKGVEWIPGWGQARIESMVENR 459

Query: 176 LLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------ 225
                     + +P+     +  + +      L +    R     GI+   D        
Sbjct: 460 PDWCISRQRTWGVPMSLFLHKETQELHPRTQELIEEVAKRVEVG-GIQAWWDLDTAELLG 518

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + + +         G+      AD+++ G D     F + 
Sbjct: 519 ADAADYVKAPDTLDVWFDSGSTHSSVVDARPEFHGNS-----ADIYLEGSDQHRGWFMSS 573

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++    
Sbjct: 574 LMLSTAIKGKAPYRQVLTHGFTVDEQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTD 633

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESIL 391
             G+    D+     + +AD    I N   R +   L  +D       A      D   +
Sbjct: 634 YSGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPEQHMVKAEDMVALDRWAV 689

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVL 448
                   +I +       H  + +++   S      Y D  K  +   K++     +  
Sbjct: 690 GRAQAAQADILKCYDEYDFHSVVQRLMQFCSVEMGSFYLDIIKDRQYTAKSDGLARRSCQ 749

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +   L   +   +   A+++++ L
Sbjct: 750 SALFHIAEALVRWIAPILSFTADEVWNEL 778



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 46/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGDIHIGHSVNKILKDIVIKSKGLSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +        R     L +   +D    T + +     
Sbjct: 106 VEQIIGKPGEKFSAAEFRAECRKYAMSQVEVQRAGFMRLGVLGDWDKPYLTMDFKTEADI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I   G + KG     +     +   + EV  
Sbjct: 166 IRALGRIIGNGHLLKGVKPVHWCTDCGSSLAEAEVEY 202


>gi|221121176|ref|XP_002162217.1| PREDICTED: similar to Valyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 710

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 68/405 (16%), Positives = 124/405 (30%), Gaps = 61/405 (15%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +  +  +Y    N   W      ++        +    +            +      
Sbjct: 150 IPQMHEKTWYQWMENCRDWCISRQLWWGHRIPAYFVTIDGQPAGPAESNDYWVS---GRT 206

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K    + ++ R             + ++  W  +     +  G+ +     KA F+P  L
Sbjct: 207 KEEALEKAVERFKVTKEKLCLQQDEDVLDTWFSSALFPFSVFGWPEQTADLKA-FYPTTL 265

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI- 317
              G DIL F    +      L+  LP  +           G+K+SKSLGN+IDP++VI 
Sbjct: 266 LETGHDILFFWVARMVMFGQELTGELPFKEVYLHAMVRDAYGQKMSKSLGNIIDPLDVIT 325

Query: 318 ------------------------------------EEVGVDALRYFLVREIACGKDGFY 341
                                                E G DALR+ L    A G+D   
Sbjct: 326 GISLQDLISRLDEYNLDPKELEKAKKGQKEMFPNGIPECGTDALRFALCAYTAQGRDVNL 385

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF------TESDESILSVCS 395
           D   ++            N +  +    ++++         F      +  D+ ILS  S
Sbjct: 386 DVLRIQG------YRHFCNKLWNATKFAMRNFTPEFVPKDQFELHGCESPMDKWILSRLS 439

Query: 396 RVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
                  E  +     +    + +       D Y +A KP      + ++      V  +
Sbjct: 440 AAANASNEGFKTYDFPKCTTALYNFWLYDLCDLYLEAIKP-VFYGNDENQKVCSQNVLYK 498

Query: 454 VIRQLAILLQAFVPKLANKIFDILF---VADENRCFQSLDQRLKP 495
            +     LL  F+P L  +++  L     + E+ C  S    L  
Sbjct: 499 CLDNGLRLLSPFMPYLTEELYQRLPHQKGSPESICVASYPSELPW 543


>gi|78185627|ref|YP_378061.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169921|gb|ABB27018.1| Isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 973

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 78/469 (16%), Positives = 149/469 (31%), Gaps = 46/469 (9%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAA--------QNAGVTTKVFVDQNSRNFRDMADVLD 88
           FH      +      DE G    +A         ++A       + Q     +       
Sbjct: 366 FHTGQKNGLPVLCPVDEAGTLTEEAGPFAGLNVLKDANPAIIEALQQADALLKHEPYGHR 425

Query: 89  ISYDDFIRTTEKRHHDTC-RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
             YD   RT +        +        + D         ++        +  V +  D 
Sbjct: 426 YPYDW--RTKKPTIFRATEQWFASIDGFRDDALDAIDKVNWTPASGRNRIESMVKERGDW 483

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                +     W      F+  +  +  L +   +H + ++     +      +S L   
Sbjct: 484 CISRQRT----WGVPIPVFYNRTNGEVLLNADTLAHIQGLIADHGADVWWEKDESELLPA 539

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
           + + +   W           M VW D+ ++      +           +PADL++ G D 
Sbjct: 540 AYASEADQW-----RKGTDTMDVWFDSGSS------WAAVASQRDNLSYPADLYLEGSDQ 588

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV--------- 316
               F +    +  ++ + P  + +     +  KG K+SKSLGNV+DP+ +         
Sbjct: 589 HRGWFQSSLLTSVAVNGHAPYQRVLTHGFALDEKGRKMSKSLGNVVDPMVIIAGGKNQKQ 648

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
               G D LR ++   +    D       L  R  AD+   + N  SR +   L D++  
Sbjct: 649 DPPYGADVLRLWV-SSVDYSADVPIGAGIL--RQLADVYRKVRNT-SRYLLGNLHDFNPS 704

Query: 377 IP--TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQK 432
                       D  +L   + V+ +I    +N   +R    +    +    + Y D  K
Sbjct: 705 RDGIPVHELPLLDRWMLQRSAEVMDDINAAFENFEFYRFFQLLQNYCVSDLSNFYLDIAK 764

Query: 433 PWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
                   +  R  +   V   +I +LA L+   +  +A  I+  L   
Sbjct: 765 DRLYVSAPDDRRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLPYP 813



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N   H+GHA   ++ D++ +   L G  V F  G D HG  I      
Sbjct: 59  PTFTLHDGPPYANGALHMGHALNKVLKDIVNKHQILKGRRVRFVPGWDCHGLPIELKVLQ 118

Query: 65  AGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           +    +               +  +             I   +D    + +K +      
Sbjct: 119 SMDQEQRQALTPIKLRKKAAAYARKQVEGQMKGFQRWGIWADWDQPYLSLQKDYEAAQIR 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++  +  KG IY+G     +S        + E+  
Sbjct: 179 VFGDMVLKGHIYRGLKPVHWSPSSRTALAEAELEY 213


>gi|229552084|ref|ZP_04440809.1| isoleucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539500|ref|YP_003173999.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314517|gb|EEN80490.1| isoleucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151176|emb|CAR90148.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 928

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 23/267 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHQAVLAQRP------ELSFPADLYLEGSDQYRGWFNSSLITSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +   P    +     +  KG K+SKSLGN I P  + ++ G + +R ++    +   D
Sbjct: 570 AATGIAPYRGILSQGFTLDGKGRKMSKSLGNTIVPSTIEKQFGAEIIRLWVATVDSS-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D   +   ++    I N + R +     D+D              D  +L   ++
Sbjct: 629 VRVSVDNFAQ--TSEAYRKIRNTL-RFMVANTGDFDPEKDAVAYDQLGSVDRYLLVRLNQ 685

Query: 397 VLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPWELKK--TNPDR--ASTVLYV 450
           V+ +++E             + S  V+++   Y D  K     +   +P R    TV+Y 
Sbjct: 686 VIAKVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEAANDPKRRSMQTVMYT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
               +  L  LL   +P  A +++  L
Sbjct: 746 ---ALLDLTKLLTPILPHTAEEVWPYL 769



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     + N   H+GHA   I  D++ R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPTFMLHDGPPFANGNIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIR------------TTEKRHHDTCR 107
               GV  K     + R       + +I     DF R            T +  +  +  
Sbjct: 105 LAKQGVKRKEMSMTDYRELCRQFAMKEIDKQRTDFKRLGVMGDWEHPYITLQHAYEASEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IY G    ++S   E+   + E+    D         PV
Sbjct: 165 RVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEIEYHDDKSPSIYVAFPV 214


>gi|66816517|ref|XP_642268.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997204|sp|Q54YD4|SYIC_DICDI RecName: Full=Probable isoleucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Isoleucine--tRNA ligase; Short=IRS;
           Short=IleRS
 gi|60470339|gb|EAL68319.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1067

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 98/264 (37%), Gaps = 11/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y         K +PA     G D     F+ +   +  L  
Sbjct: 525 EDVFDCWFESGSMPYAQQHYPFENKDKFEKIFPAHFIAEGLDQTRGWFYTLLVLSTALFD 584

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP+EV+ +VG D+LR +L+       +   +
Sbjct: 585 KPPFQNLIVNGLVLAADGKKMSKRLKNYPDPMEVVSKVGADSLRLYLINSPVVRAETLKF 644

Query: 342 DKDGLKKRVNADLA---NGIGNLVSRSVSMILKDYDGMIPT----PGAFTESDESILSVC 394
            + G++  +        N     V   +           P       +    D+ IL+ C
Sbjct: 645 QEKGVQDMIKDVFLPWFNAYRFFVQNCLRFEKATNTTFQPDIKVALASENVMDKWILASC 704

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVE 453
             ++  +R  M    ++  + +++  + ++  +F       LK +N D      L +  E
Sbjct: 705 QSLIAFVRAEMAAYRLYTVVPKLVRFIEDLTNWFVRLNRKRLKGSNGDADCLAALNILYE 764

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+  + I +  F P     ++  L
Sbjct: 765 VLMTICIAMGPFTPFFTEYMYQNL 788



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +        +    PH GH     I D + R+    G  V    G D HG  I   
Sbjct: 35  EGKPEYSFYDGPPFATGLPHYGHILAGTIKDTITRYAHQTGHHVERRFGWDCHGLPIEFE 94

Query: 62  AQNAG-----------------VTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + S  +  + + +   I   +  +T +   
Sbjct: 95  IDKLHGVRTKEDVLKMGIPTYNQHCRSIVMKYSHEWEIVVNRMGRWIDMKNNYKTMDTPF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   +++++  K  +Y+G     YS+      ++ E
Sbjct: 155 MESVWWVFQELFKKDLVYQGFKVMPYSIGCTTPLSNFE 192


>gi|52841172|ref|YP_094971.1| isoleucyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81823443|sp|Q5ZWZ6|SYI_LEGPH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52628283|gb|AAU27024.1| isoleucyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 931

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 124/366 (33%), Gaps = 23/366 (6%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI--LPI 190
           +A  N+ +              N V+   +     + S      L  +++  E       
Sbjct: 431 QAIINEIDKVNWVPDWGKARISNMVENRPDWCISRQRSWGTPMPLFVHKTTRELHPDTLE 490

Query: 191 ERRNEVISFVKSGLKDLSL--SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
                 +   KSG+       S +      K  D     M VW+D+  ++ +        
Sbjct: 491 LIEKVAVMIEKSGIDAWFDLDSSELLGDDAKHYDKITDTMDVWLDSGISHYSVLK----- 545

Query: 249 DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
             +    +PAD++  G D     F++    A  +         +     +  +G+K+SKS
Sbjct: 546 -HNNDLDFPADVYFEGSDQHRGWFNSSLTTAVAMYGVAAYKTVLTHGYTVDAEGKKLSKS 604

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GN +   +++ + G D LR ++       +     ++ +K+  NAD    I N   R +
Sbjct: 605 KGNYVALDKLVNQHGADILRLWVASTDYRHE-VSISEEIIKR--NADAYRRIRNTA-RFL 660

Query: 367 SMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VS 422
              L D++            E D   L  C  + +EI    +N   H    ++ +   V 
Sbjct: 661 LANLFDFNPASDCIDAKELLELDRWALKRCQLLQEEIITAYENYHFHLIYQKIHNFCAVD 720

Query: 423 EVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
               Y D  K  +    K +  R  +       +++   I L   +   A +I+  +   
Sbjct: 721 MGSFYLDLIKDRQYTTAKDSIAR-RSCQTAMYHMVKAFTIWLAPILSFTAEEIWQTIPGN 779

Query: 481 DENRCF 486
           +    F
Sbjct: 780 NSESIF 785



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 74/246 (30%), Gaps = 34/246 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           ++  +     Y N   H GHA   I+ D++ +     G D  F  G D HG  I    + 
Sbjct: 49  KRFILHDGPPYANGHLHCGHALNKILKDIIIKSKTFSGFDAPFVPGWDCHGLPIELNVEK 108

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
                   ++ + F  +           +DI  D+F R                +   GD
Sbjct: 109 KVGKAGSKISPREFRAKCREYAASQ---IDIQRDEFQR----------------LGVLGD 149

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS--AYQDKL 176
            Y    +  Y            +       +      PV W  + G     +   Y+DK 
Sbjct: 150 WYNPYVTMDYHYEANIV---RALGLMIKNGHLQQGFKPVHWCIDCGSALAEAEVDYEDKT 206

Query: 177 LSYYESHPEFILPIERRNEVISFVKSG---LKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
               +     + P E  N   +        L   + +  T      +   P+ I Y  ID
Sbjct: 207 SPSIDVAFSAVNPSEFLNCFGTQPAVKPLILPIWTTTPWTLPANEAVCLHPE-IDYALID 265

Query: 234 ALTNYL 239
           A  +Y 
Sbjct: 266 AGNSYY 271


>gi|292489405|ref|YP_003532292.1| Isoleucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898376|ref|YP_003537745.1| isoleucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198224|emb|CBJ45330.1| isoleucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554839|emb|CBA22710.1| Isoleucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 938

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 112/351 (31%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S    +          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVASRPDWCISRQRTWGVPMALFVHKDTEQLHPDSLELMEKVAVRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ +   +                
Sbjct: 501 E-QDGIQAWWDLDARELMGADADNYVKVPDTLDVWFDSGSTSYSVVE----ARPEFGGNA 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P D+++ G D     F +    +  +    P  + +     +  +G K+SKSLGN + P 
Sbjct: 556 P-DMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L +  
Sbjct: 615 DVMNKLGADILRLWVASTDYSGE-IAVSDEILKRSADS------YRRIRNTARFLLANLA 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        +I  + +    H  + +++   S      Y
Sbjct: 668 GFNPETDKVKPEEMVVVDRWAVGRALAAQNDIIASYEAYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++I+  L
Sbjct: 728 LDIIKDRQYTAKADGLARRSCQTALWYIAEALVRWMAPIMSFTADEIWGYL 778



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 17/246 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQTIGKPGEKVSAAEFRAACREYAARQVEGQKADFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                KI   G ++KG     + +   +   + EV Y        +   N V   +    
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCMDCRSALAEAEVEYYDKTSPSIDVMFNAVDK-DAVQA 224

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ 225
            F  ++    +     +   + +P  R   +    +  L  +          +      +
Sbjct: 225 KFGAASVDGPISLVIWTTTPWTMPANRAIALHPEFEYQLVQIEGRALILAKDMVDSVMKR 284

Query: 226 YIMYVW 231
             +  W
Sbjct: 285 VGVPQW 290


>gi|296272343|ref|YP_003654974.1| valyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096517|gb|ADG92467.1| valyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 882

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 126/382 (32%), Gaps = 27/382 (7%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ------WMEEEG 164
           + +   G  Y+        +  + + + D   +         +                 
Sbjct: 337 EHVHQVGHCYRCKNIVEPFISQQWFLSSDMAQESIRKTKETTKERAASGEHNGTLFHPAH 396

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
           +    +A+ D+L  +  S   +                                K     
Sbjct: 397 WINSYTAWMDELRPWCISRQLWWGHRIPVFTCDDCGHQWADKADEPEACPKCKSKKYTQD 456

Query: 225 QYIMYVWIDALTNYLTTTGYLD-------NPDGSKAKFWPADLHVIGKDILRFHAIYWPA 277
             ++  W  +    ++  G+ +            +A F+P  L + G DI+ F       
Sbjct: 457 PDVLDTWFSSALWAMSPLGWGNNGKLEDLYNSTDEADFYPNSLLITGFDIMFFWVARMMM 516

Query: 278 FLLSANLPLP-KKVFSHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
                   LP + ++ H  +  + G K+SKS GNVIDP++++EE   D +R+ L      
Sbjct: 517 MGEHFKKELPFEDIYMHALVRDEHGAKMSKSKGNVIDPLDMVEEHSADIIRFTLAYLAVQ 576

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
           G+D       L++    +  N + N  S  + + +  +  +       T     + S  S
Sbjct: 577 GRDIKLGAKNLEQ--FRNFTNKLYN-ASNFLQLNVDTFPDL-KDIEIKTPLGIYMQSRLS 632

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
             + E+R  +     + A + +   V       +    W ++     + S V      + 
Sbjct: 633 DAVDEVRATLDTFKFNEAASILYKFVW------NEFCDWGIEYAKASKDSVVE--LGAIF 684

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
           ++   ++  F+P +++ ++  L
Sbjct: 685 KETLKMVSPFMPFISDFLYHKL 706



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 22/174 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ +   I           HIGHA    + D++ R+ R+DG   L+  GTD  G      
Sbjct: 34  EDGKNFSIMMPPPNVTGSLHIGHALTFTLQDIITRYKRMDGFKALWQPGTDHAGIATQNV 93

Query: 62  AQN---AGVTTKVFVDQ-----------------NSRNFRDMADVLDISYDDFIRTTEKR 101
            +    A  TTK  + +                      R +        + F  T ++ 
Sbjct: 94  VEKQLLAEGTTKEEIGREKFLQRAWKQKETSGGNIVHQMRKLGVTPAWKRERF--TMDEG 151

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
             +  +  +  + ++G I +  Y   +   D A  + +  ++  +G++Y+  + 
Sbjct: 152 LQEAVKEAFVSLYNEGHITQNNYMVNWCTHDGALSDIEVEHEEVNGKFYHMIYK 205


>gi|158301212|ref|XP_320939.3| AGAP002101-PA [Anopheles gambiae str. PEST]
 gi|157012361|gb|EAA01000.3| AGAP002101-PA [Anopheles gambiae str. PEST]
          Length = 1217

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 98/281 (34%), Gaps = 23/281 (8%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G         +   W ++ +     + Y           +PAD    G D     F+ + 
Sbjct: 521 GNPPLRRVTEVFDCWFESGSMPFAQSHYPFENPAEFMNNFPADFIAEGIDQTRGWFYTLL 580

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  L    P      +   +   G+K+SK   N  DP+EV+ + G DALR +L+    
Sbjct: 581 VISTALFNKAPFKNLNVTGLVLAADGQKMSKRKKNYPDPMEVVNKYGADALRLYLINSPV 640

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG------------ 381
              ++  + ++G++  +              +   + ++ D      G            
Sbjct: 641 VRAENLRFKEEGVRDIIKDVFLPWF-----NAFRFLFQNVDRFEKEEGIRYRYDAVRHAE 695

Query: 382 --AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK 438
             +    D  I+S    +L+ + E M+   ++  + ++   + ++ + Y    +     +
Sbjct: 696 KRSTNVMDVWIISFKESLLKFVTEEMKAYRLYTVVPRLTKFIDQLTNWYVRMNRKRIKGE 755

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              +     L    +V+  +  ++  F P L   ++  L +
Sbjct: 756 YGVEDCYHALDTLYDVLLAMVKMMAPFTPYLTEFMYQRLRL 796



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           K + +        +    PH GH     + D++ R+    G  V    G D HG  +   
Sbjct: 43  KGKPRYTFYDGPPFATGLPHYGHILAGTVKDIVTRYAHQQGYHVERRFGWDCHGLPVEYE 102

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +  +   +   I + +  +T    +
Sbjct: 103 IDKTLNIRGPDDVAKMGIKAYNNECRKIVMRYANEWEQIVGRMGRWIDFKNDYKTLYPWY 162

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K++  KG +Y+G     YS       ++ E
Sbjct: 163 MESIWWVFKQLYAKGFVYQGVKVMPYSTACTTALSNFE 200


>gi|59711074|ref|YP_203850.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354555|sp|Q5E7N4|SYI_VIBF1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59479175|gb|AAW84962.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 952

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 61/403 (15%), Positives = 125/403 (31%), Gaps = 35/403 (8%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +     +  +  Q         +   V+WM E G      
Sbjct: 403 HHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALEEVKSVEWMPEWGQNRIEG 462

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ-- 225
             + +          + +PI      E        L+ +    K  +  GI+   D    
Sbjct: 463 MIEGRPEWCISRQRTWGVPIALFVHKETAELHPDSLELIEKVAKLVEEKGIQAWWDVDAA 522

Query: 226 ---------------YIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVIGKDIL- 268
                            + VW D+   + +      +     + +   ADL++ G D   
Sbjct: 523 ELMGEEDAANYEKVLDTLDVWFDSGVTHFSVVDSREEYNFPEEERTHSADLYLEGSDQHR 582

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F +    +  +    P  + +     +   G K+SKS+GNV+ P +V  ++G D LR 
Sbjct: 583 GWFQSSLISSVAMKGKAPYRQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLGADILRL 642

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTES 386
           ++       +    D+     + +AD    I N     ++ +          P       
Sbjct: 643 WVASTDYTNEVAVSDE---ILKRSADAYRRIRNTARFFLANLSGFNPATDIVPAEEMVAL 699

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI ++     +H    +++   S      Y D  K  +   K     
Sbjct: 700 DRWAVGRAFAAQQEIIKSYDEYNLHEVTQRLMHFCSIEMGSFYLDVIKDRQYTAKKGGHA 759

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       ++  L   +   +   A++I++ +    E   F
Sbjct: 760 QRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGEREKFVF 802



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L +   +D   RT +       
Sbjct: 106 VEKKKGKPGQKISAAEFREECRKYAAGQVEGQKESFKRLGVMGEWDKPYRTMDFGTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+D+G + KG     +     +   + EV  
Sbjct: 166 IRSLGKIADQGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|148927961|ref|ZP_01811363.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886691|gb|EDK72259.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 753

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 124/324 (38%), Gaps = 16/324 (4%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
              G  YK        ++D+ + +   +    +      +   +Q+         L    
Sbjct: 415 HSVGHCYKCGTVIQPLMKDQWFLS---MRPLVEKAKKVIEAGDIQFTPSNSKRVLLQYLD 471

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
           +           + +PI    + I      + D  + R+T + G       +     W  
Sbjct: 472 NLRDWNLSRQIPWGIPIPAF-QNIDNPDDWIFDSRVDRETIEVGGYTYKREEDTFDTWFS 530

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVF 291
           +      TT YL+      +KF+P D+   G D+L      +      ++  +P  K V+
Sbjct: 531 SGQWPFITTDYLEGG--ELSKFYPTDMMETGHDLLDRWVARMIMLGLYMTDKVPF-KNVY 587

Query: 292 SHGFILHK-GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV 350
            HG +L + G+K+SKS GNVI+P+++I + G DA R  ++   + G++  +    +    
Sbjct: 588 MHGMVLDEHGQKMSKSKGNVINPMDIINKYGSDAFRLGIIASRSAGQNQAFSTTKVVA-- 645

Query: 351 NADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
             + AN + N+       + + +    P P   T +D  I+   +   +EI   + +   
Sbjct: 646 GRNFANKLWNIARFIEDRVGEKFKNRAPEPQ--TIADHWIIRELNTASEEIDRLLSDYRF 703

Query: 411 HRALAQVISLVSE--VDRYFDAQK 432
             A   V   + +   D Y +A K
Sbjct: 704 AEATEVVYHTIWDNVADWYVEASK 727



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 60/173 (34%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           E     I       N   HIGH     + D+L R+HR+ G D ++  G D  G +     
Sbjct: 108 EGRPYSIVMPPPNANGNLHIGHGLTFNLQDILIRYHRMKGFDTIYIPGADHAGFETWVVY 167

Query: 63  QNAGVTT---------KVFVDQNSRNFRDMADVLDI---------SYDDFIRTTEKRHHD 104
           +    +          +    Q           +++         S+D  + T +++  +
Sbjct: 168 EKLLESEGKSRFDFSREQLYSQVWDFVEKQRGSVELQLRALGTSASWDHLVFTLDEKVIE 227

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T    +KK+ D   +Y+G     Y  + +  + D EV    +         P+
Sbjct: 228 TVYGTFKKLWDDKLVYRGERLVNYCTKHQTSFADIEVEHKTEKGKIWKIAYPL 280


>gi|238882935|gb|EEQ46573.1| isoleucyl-tRNA synthetase [Candida albicans WO-1]
          Length = 1088

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 108/276 (39%), Gaps = 11/276 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y    +      +PA+    G D     F+ +      L  
Sbjct: 530 EEVFDCWFESGSMPYASKHYPFENEKKFLDAFPANFISEGLDQTRGWFYTLTVLGTHLFK 589

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP  V+E+ G DALR +L+       +   +
Sbjct: 590 TAPYQNVIVTGIVLAADGKKMSKRLKNYPDPTLVLEKYGADALRLYLINSPVLRAETLKF 649

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+K+ V++ L         +  +  +  KD         +       D  +L+    
Sbjct: 650 KEEGVKEIVSSVLLPWYNSYKFLKDAADLFKKDNGKDFVYDSSLHSTNVMDRWLLASIQS 709

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVE 453
           +++ I E M    ++  + +++  + ++ + Y   + ++       + +     L   VE
Sbjct: 710 LIKFIHEEMTGYRLYTVVPRLLHFIDDLTNWYIRFNRRRIKGYASDDVEDTQKGLNTLVE 769

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            +  L+  +  F P LA+ I+  + V  +    + +
Sbjct: 770 ALLTLSRAMAPFTPYLADGIYQRIKVYFKQEDLEKI 805



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           ++           +    PH GH     + D++ R+  ++G  V    G D HG  +  +
Sbjct: 42  EDLPPFAFFDGPPFATGTPHYGHILASTVKDIIPRYATMNGYHVERRFGWDTHGLPVEHE 101

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +   +T+K                     + D+  R  + +   +D+  D   +T   
Sbjct: 102 IDKKLNITSKEDVYAMGIDKYNAECRAIVMRYADEWRRTIKRLGRWIDMDNDY--KTLYP 159

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++    +K++ +K  +Y+G     YS       ++ E  +   
Sbjct: 160 EFMESVWWAFKELFNKDAVYRGLRVMPYSTACTTPLSNFEAQQNYK 205


>gi|197335481|ref|YP_002155222.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|254782453|sp|B5FA60|SYI_VIBFM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|197316971|gb|ACH66418.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 952

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 61/403 (15%), Positives = 125/403 (31%), Gaps = 35/403 (8%)

Query: 116 KGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ-----YYNAQHNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +     +  +  Q         +   V+WM E G      
Sbjct: 403 HHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALEEVKSVEWMPEWGQNRIEG 462

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ-- 225
             + +          + +PI      E        L+ +    K  +  GI+   D    
Sbjct: 463 MIEGRPEWCISRQRTWGVPIALFVHKETAELHPDSLELIEKVAKLVEEKGIQAWWDVDAA 522

Query: 226 ---------------YIMYVWIDALTNYLTTTG-YLDNPDGSKAKFWPADLHVIGKDIL- 268
                            + VW D+   + +      +     + +   ADL++ G D   
Sbjct: 523 ELMGEEDAANYEKVLDTLDVWFDSGVTHFSVVDSREEYNFPEEERTHSADLYLEGSDQHR 582

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F +    +  +    P  + +     +   G K+SKS+GNV+ P +V  ++G D LR 
Sbjct: 583 GWFQSSLISSVAMKGKAPYRQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLGADILRL 642

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTES 386
           ++       +    D+     + +AD    I N     ++ +          P       
Sbjct: 643 WVASTDYTNEVAVSDE---ILKRSADAYRRIRNTARFFLANLSGFNPATDIVPAEEMVAL 699

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDR 443
           D   +       QEI ++     +H    +++   S      Y D  K  +   K     
Sbjct: 700 DRWAVGRAFAAQQEIIKSYDEYNLHEVTQRLMHFCSIEMGSFYLDVIKDRQYTAKKGGHA 759

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       ++  L   +   +   A++I++ +    E   F
Sbjct: 760 QRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGEREKFVF 802



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L +   +D   RT +       
Sbjct: 106 VEKKKGKPGQKISAAEFREECRKYAAGQVEGQKESFKRLGVMGEWDKPYRTMDFGTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+D+G + KG     +     +   + EV  
Sbjct: 166 IRSLGKIADQGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|161523963|ref|YP_001578975.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351276|ref|YP_001946904.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|254782377|sp|A9AGN6|SYI_BURM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160341392|gb|ABX14478.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335298|dbj|BAG44368.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 945

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAQHAVPVDEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
             +    H  +A++ +  SE     Y D  K   L  + PD  +  +       + + L 
Sbjct: 722 YYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTALYHLTQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            +L  F+   A + + +   A +
Sbjct: 781 RVLAPFLSFTAEEAWKVFQPASD 803



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + D  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKAGFKRLGVLGDWADPYKTMNFVNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|237739145|ref|ZP_04569626.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423745|gb|EEO38792.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 933

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 139/433 (32%), Gaps = 27/433 (6%)

Query: 71  VFVDQNSRNFRDMADVLDI--------SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           V+ + N    + + +   I        SY    R+            + ++   GD+ + 
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEG-GDLREK 431

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                  +     +  + +    + +          W      F+     ++        
Sbjct: 432 TLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILD 491

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTT 242
               ++     N  +      L    L  K    G+K+  +   IM VW D+ +++    
Sbjct: 492 RICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETN-IMDVWFDSGSSHRGVL 550

Query: 243 GYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKG 300
              +          P DL++ G D     FH     +   + + P    +        +G
Sbjct: 551 EVWEGLHR------PCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEG 604

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           +K+SKSLGN + P +VI+  G D LR +    +    D     + +K+   ++    I N
Sbjct: 605 KKMSKSLGNTVAPSDVIKVYGADILRLW-CGSVDYRDDVRISDNIIKQ--MSEAYRRIRN 661

Query: 361 LVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV-- 417
                +      +            E D+  L+    + + + E+      +     +  
Sbjct: 662 TARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHY 721

Query: 418 ISLVSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
            + +     Y D  K     +K +         V  E++  L  ++   +   A +I++ 
Sbjct: 722 FAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWEN 781

Query: 477 LFVADENRCFQSL 489
           L    E R  +S+
Sbjct: 782 L--PAEAREAESV 792



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 70/221 (31%), Gaps = 21/221 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  E   +     Y N   HIGHA   I+ D++ ++    G    +  G D HG  I   
Sbjct: 48  KNGESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFKSPYVPGWDTHGLPIELQ 107

Query: 62  AQNA-------GVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                       ++        + +  +     ++    L +   +D    T + R    
Sbjct: 108 VVKEVGVAKAREMSPLEIRKRCEEYARKWVGIQKEQFIRLGVLGDWDHPYLTLDPRFEAK 167

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
              L+ +I +KG I+KG    ++S   E    + E+       Y +   +    M+    
Sbjct: 168 QLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEIE-----YYDHVSPSIYVRMQANKD 222

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                 + +       +   + LP      +      GL  
Sbjct: 223 LLDKIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYK 263


>gi|224498530|ref|ZP_03666879.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 921

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 103/267 (38%), Gaps = 23/267 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                  PADL++ G D     F++    A 
Sbjct: 516 FTKETDIMDVWFDSGSSHQAVLNARPELSR------PADLYMEGSDQYRGWFNSSLTTAV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN + P +VI+++G D +R ++        D
Sbjct: 570 AITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVDYQA-D 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                + LK+       + +   +  ++  +L + +   PT          E D+ ++  
Sbjct: 629 VRVSDEILKQ------VSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMMIK 682

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYV 450
            + +++ ++++ +         Q+ +   V     Y D  K     +  +      +  V
Sbjct: 683 LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTV 742

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
             E +  L  LL   +P    ++++ L
Sbjct: 743 FYEAVVTLTKLLAPILPHTTEEVWNSL 769



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           ER    +     Y N + H+GHA    I D++ R+  + G    +  G D HG  I  A 
Sbjct: 46  ERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAI 105

Query: 63  QNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +  +     R     L I+ D      T    +      
Sbjct: 106 AKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIK 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++ +++ KG IYKG    ++S   E+   + E+  
Sbjct: 166 VFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEY 200


>gi|257870266|ref|ZP_05649919.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804430|gb|EEV33252.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 931

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 24/266 (9%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++                 +PAD+++ G D     F++    +  +
Sbjct: 518 KETDIMDVWFDSGSSHEAVLRQRP------ELTFPADMYLEGSDQYRGWFNSSITTSVAI 571

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +  +G K+SKSLGN I P +VI+++G D LR ++   +    D  
Sbjct: 572 NGEAPYKSVLSQGFTLDGEGRKMSKSLGNTIAPEKVIKQMGADILRLWV-SSVDYEADVR 630

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVL 398
              D L +   +++   I N + R +     D+D    + +       D+ +L   +  +
Sbjct: 631 VSMDILNQV--SEVYRKIRNTM-RFLLANTADFDPKTDMVSYENLRSVDKYMLVRLNETI 687

Query: 399 QEIREN-MQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL--KKTNPDR--ASTVLYVT 451
           + IRE+  +          +I+ +       Y D  K       + +P R    TV Y T
Sbjct: 688 KTIREDGYEKYNFLHIYKTIINFLTGDLSAFYLDFAKDVVYIEAENDPQRRAMQTVFYQT 747

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
                 L  LL   +P  A +I+  L
Sbjct: 748 AVA---LTKLLTPIIPHTAEEIWSHL 770



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGHALNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKVFVDQNSRN------------FRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
             N G+  K       R              R+    L IS  +D    T    +     
Sbjct: 105 LTNKGMKRKEMTLAEYRKKCEEYALTQVDTQREDFKRLGISGDWDHPYITLTPDYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K+++KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYKDVKSPSIYVAFPV 214


>gi|239833544|ref|ZP_04681872.1| isoleucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239821607|gb|EEQ93176.1| isoleucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 980

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 96/254 (37%), Gaps = 17/254 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +  T     +        WPAD+++ G D     FH+    +       
Sbjct: 579 ILDVWFDSGSTHTFTLEDRPDMK------WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 632

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V     +   G+K+SKSLGN + P +VI+E G D LR +++      +D    K 
Sbjct: 633 PYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVMTTDY-WEDQRLGKS 691

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++   N D    + N +   +  +  D +G         E +  +L   + + + +R  
Sbjct: 692 IIQ--TNIDAYRKLRNTIRWMLGTLAHD-EGENVAHAELPELERLMLHRLTELDEIVRSG 748

Query: 405 MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAI 460
                  R    +I    V     YFD +K   L    P   R    L    E+  +L  
Sbjct: 749 YDAFDFKRIARTLIDFMNVELSAFYFDIRKD-ALYCDAPSSVRRKAALQTVREIFDRLTT 807

Query: 461 LLQAFVPKLANKIF 474
            L   +P    + +
Sbjct: 808 WLAPMLPFTMEEAW 821



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG  I   
Sbjct: 61  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 120

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
              K         +V +++  R  RD A   
Sbjct: 121 IEEKYRAEGKNKDEVPINEFRRECRDFAAGW 151


>gi|312875055|ref|ZP_07735073.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089450|gb|EFQ47876.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 804

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHTTNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|258508286|ref|YP_003171037.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148213|emb|CAR87186.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649603|dbj|BAI41765.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 928

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 23/267 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHQAVLAQRP------ELSFPADLYLEGSDQYRGWFNSSLITSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +   P    +     +  KG K+SKSLGN I P  + ++ G + +R ++    +   D
Sbjct: 570 AATGIAPYRGILSQGFTLDGKGRKMSKSLGNTIVPSTIEKQFGAEIIRLWVATVDSS-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D   +   ++    I N + R +     D+D              D  +L   ++
Sbjct: 629 VRVSVDNFAQ--TSEAYRKIRNTL-RFMVANTGDFDPEKDVVAYDQLGSVDRYLLVRLNQ 685

Query: 397 VLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPWELKK--TNPDR--ASTVLYV 450
           V+ +++E             + S  V+++   Y D  K     +   +P R    TV+Y 
Sbjct: 686 VIAKVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEAANDPKRRSMQTVMYT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
               +  L  LL   +P  A +++  L
Sbjct: 746 ---ALLDLTKLLTPILPHTAEEVWPYL 769



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     + N   H+GHA   I  D++ R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPTFMLHDGPPFANGNIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIR------------TTEKRHHDTCR 107
               GV  K     + R       + +I     DF R            T +  +  +  
Sbjct: 105 LAKQGVKRKEMSMTDYRELCRQFAMKEIDKQRTDFKRLGVMGDWEHPYITLQHAYEASEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IY G    ++S   E+   + E+    D         PV
Sbjct: 165 RVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEIEYHDDKSPSIYVAFPV 214


>gi|309807047|ref|ZP_07701027.1| leucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166543|gb|EFO68742.1| leucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 804

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|309805058|ref|ZP_07699112.1| leucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165620|gb|EFO67849.1| leucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 804

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYELFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|145591703|ref|YP_001153705.1| valyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283471|gb|ABP51053.1| valyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 799

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 17/256 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLSAN 283
           +   W+D+  +++  +GY    +    K +P   +   G DI+R    Y    A+LL  N
Sbjct: 456 VFDTWMDSSISWMYASGYTKEFNV-FPKVYPHSIMRPQGYDIIRTWLYYSLLRAYLLYGN 514

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
           +P      +   +  KGE + KS GNVID +  +E+ G DA+R++       G D  Y++
Sbjct: 515 VPFRYVRINGMGLDEKGEAMHKSKGNVIDLLAPVEKYGADAVRFWAAAAGRLGSDYRYNE 574

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
           + +K+    +    + N+    +S                T  D++IL+   +V +    
Sbjct: 575 NIIKE--GKEFVTKVWNISRFVLSF------PEPTDKPELTPVDKAILAKLYQVAKRAIS 626

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN---PDRASTVLYVTVEVIRQL 458
              +  ++     + + +     D Y +  K     + +    +     ++    V +  
Sbjct: 627 AFSDLDVYEPAHLLYNFIWHEFADHYIELAKSRAYNRDSTFTQEEQRAAIWTLYAVWKYS 686

Query: 459 AILLQAFVPKLANKIF 474
             LL   +P + +KI+
Sbjct: 687 LKLLAPIMPFVTDKIW 702



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 15/145 (10%)

Query: 3   EREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R    I T   Y  + +PHIG        D++ARF R+ G+DV+F    D +G  I   
Sbjct: 34  TRPVFVIDTPPPYLSSNRPHIGQTASYAHFDMIARFLRMRGIDVIFPFYADRNGLPIEVQ 93

Query: 62  AQN-----AGVTTKVFVDQNSR--------NFRDMADVLDISYDDFIR-TTEKRHHDTCR 107
            +      A    +    Q  +         F        +S+D +   T    +    +
Sbjct: 94  VEKKYGIVAHEVPREKFIQMCKEELDRYEGEFVASLRRWGLSFDYWPNGTDSPEYRRMTQ 153

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRD 132
             + ++  +G +Y+      +  R 
Sbjct: 154 STFIELWRRGLVYEAERPTPWCPRC 178


>gi|149918904|ref|ZP_01907390.1| putative leucyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820278|gb|EDM79695.1| putative leucyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 900

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH       D++AR+ R+ G +VL   G D  G    +
Sbjct: 28  RSKPKYYVLDMFPYPSGSGLHVGHPEGYTATDIIARYKRMKGFNVLHPMGWDSFGLPAER 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V  D+   NF+    +L  SYD    I TT+  +    + ++ ++     
Sbjct: 88  YAMKTGTHPAVRTDECIANFKRQLKMLGFSYDWSREIATTDPGYFKWTQWIFLQLWGAFY 147



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 100/331 (30%), Gaps = 89/331 (26%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLD---NPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +           +W P DL++ G +    H +Y   + 
Sbjct: 529 ETNTMPQWAGSCWYYLRFCDPRNADAPWSDEAQDYWMPVDLYIGGAEHAVLHLLYARFWH 588

Query: 280 --------LSANLPLPKKV----------------------------------------F 291
                   +    P  K V                                        +
Sbjct: 589 KVLFDLGHVGTREPFHKLVNQGMILGATYVPKQGQPKGEVKRIYVADDIETLGEGENVEY 648

Query: 292 SHGFI----LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            H         + +K+SKS GNVI+P +VI E G D +R + +          +  +G+ 
Sbjct: 649 VHKQTREPLTIQWDKMSKSRGNVINPDDVIAEYGADTMRLYEMFMGPLEASAPWQPEGV- 707

Query: 348 KRVNADLANGIGNLVSRSVSMIL---KDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
                   NG    ++R+  +     KD         A  E  E    +  R + E+ E 
Sbjct: 708 --------NGCFRFLARAYRLFFEQGKDGAADAVREFAEGEGTEDQRRLLHRTISEVSER 759

Query: 405 MQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQA 464
           ++    + A++ ++  V +V++                R               ++LL  
Sbjct: 760 IERMSFNTAISSLMVFVRDVEK-------------GGARLGKA------AAETFSVLLAP 800

Query: 465 FVPKLANKIFDILFVADENR--CFQSLDQRL 493
           F P LA + +  L          + + D+ L
Sbjct: 801 FAPHLAEEFWRALGHESSLTYAPWPAADESL 831


>gi|90962017|ref|YP_535933.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123391348|sp|Q1WTA9|SYI_LACS1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|90821211|gb|ABD99850.1| Isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 931

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 135/421 (32%), Gaps = 31/421 (7%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + M       +D   RT +          +  +    D   G  +      D   +    
Sbjct: 388 KQMDYEHSYPFDW--RTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFPD---WGQKR 442

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +Y     +          W      F+             E   + +             
Sbjct: 443 LYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEAIMTKETIEHVAKLVEEHGSNIWFQREA 502

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K  L +   S  + +       D   IM VW D+ +++                 +PADL
Sbjct: 503 KDLLPEGFTSEHSPNGKFTKETD---IMDVWFDSGSSHQGVCAER------DYLTYPADL 553

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++ G D     F++    +   S + P  + +     +  KG K+SKSLGN I P EVI+
Sbjct: 554 YLEGSDQYRGWFNSSLITSVAYSGHAPYKQILSQGFTLDGKGRKMSKSLGNTIVPSEVID 613

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           ++G + +R +++       D        ++   +            +V  +L +     P
Sbjct: 614 KMGAEIIRLWVLSVDTSA-DVRVSMGSFQQIAES------YRKFRNTVRFLLANTTDFDP 666

Query: 379 TP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                        D+ +  + ++  +EI +   N        ++I+ +       Y D  
Sbjct: 667 AKNAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 432 KPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K     +  +  +  ++  V  +V+ +L  L+   +P    +I+  L   +E      + 
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYLKEDEEYAQLSEMP 786

Query: 491 Q 491
           +
Sbjct: 787 E 787



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AGV  K             +  +     R     L +   +D+   T +  +     
Sbjct: 105 LKKAGVDRKALSVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K+++KG IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGKMAEKGLIYKGKKPVFWSWSSESALAEAEVEYH 201


>gi|313203789|ref|YP_004042446.1| leucyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443105|gb|ADQ79461.1| leucyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 999

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D +G    +
Sbjct: 28  QNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIFSRYKRLKGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V   +N   +R+  D +   YD    IRT E  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPAVTTKKNIARYREQLDKIGFCYDWSREIRTCEPDYYKWTQWAFIQMFNSYF 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 95/222 (42%), Gaps = 37/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL       W     +A   L    ++ G+ +    K+SKS+ NV++P ++
Sbjct: 732 VDVNIVSNDILDLDKFKAWMPDYANAEFILEDGKYTCGWAVE---KMSKSMYNVVNPDDI 788

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + R  S+  K  + +
Sbjct: 789 VEKFGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKRLWSLFYKAEEFI 839

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +       E     L    + +++I  +++N   + +++  +  V+E+         + L
Sbjct: 840 VTDEVPTAEE----LKTLHKTIKKITFDIENFSYNTSVSAFMICVNEL---------FTL 886

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +              ++  LAILL  F P +A +++  L 
Sbjct: 887 KCSKKA-----------ILEPLAILLAPFAPHIAEELYHALG 917


>gi|259501448|ref|ZP_05744350.1| leucine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190828|ref|ZP_07267082.1| leucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167197|gb|EEW51692.1| leucine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 804

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 8/204 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSG 203
                ++  PI+           G
Sbjct: 204 -LDDLDWPEPIKEMQRNWIGRSYG 226



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHTTNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|13476816|ref|NP_108385.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14027577|dbj|BAB53846.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 1003

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 19/261 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + ++ T              WPAD+++ G D     FH+    + 
Sbjct: 595 WKQVMDILDVWFDSGSTHVFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLLESC 648

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    V     +   G K+SKSLGN + P +VI++ G D LR ++V      +D
Sbjct: 649 GTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVVTTDY-WED 707

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K+ L+   N D    + N +   +  +  D DG      A  E +  +L   + + 
Sbjct: 708 QRLGKNVLQ--TNIDAYRKLRNTIRWMLGTLAHD-DGETVPLEAMPELERLMLHRLAELD 764

Query: 399 QEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVE 453
           + +R+        R    ++    V     YFD +K   L    P    R ++V  V   
Sbjct: 765 EVVRQGYDAFEFKRITRALVDFMVVELSAFYFDIRKD-ALYCDAPSSVKRKASVQ-VVRH 822

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           +   L   L   +P    + +
Sbjct: 823 LFDCLVKWLAPMLPFTMEEAW 843



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 27/63 (42%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 63  GRTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSTYVPGWDCHGLPIEWKI 122

Query: 63  QNA 65
           +  
Sbjct: 123 EEQ 125


>gi|56808754|ref|ZP_00366471.1| COG0060: Isoleucyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 822

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 104/281 (37%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLTE 783



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              G+  K             +        R+    L +S D      T + +       
Sbjct: 106 AKQGIKRKEMDLAEYLEMCRQYALSQVDKQRNDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  +++KG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGAMAEKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|319757613|gb|ADV69555.1| isoleucyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 929

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 104/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLAYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +   G K+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGNGMKMSKSLGNTILPSDVEKQFGAEILRLWVTSVDTS-ND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +L  
Sbjct: 631 VRVSMDILGQVSET------YRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLLVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT----NPDRASTV 447
            ++++ +IRE   N         V++ V       Y D  K           +  +  TV
Sbjct: 685 FNKLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL  F+P  A +I+  L    E 
Sbjct: 745 FY---DILVKITKLLTPFLPHTAEEIWSYLEHEAEE 777



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKVFV-DQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
               GV  K     +     RD     +D   DDF R            T  K +     
Sbjct: 105 LAKQGVKRKEMDLVEYLEMCRDYAFSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|319900580|ref|YP_004160308.1| leucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415611|gb|ADV42722.1| leucyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 945

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPEVTTKANINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSFY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +   SL  E +
Sbjct: 148 CNTCASAKPISLLTEHF 164



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 95/222 (42%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDTEAFKAWRPEYKTAEFVLEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  ++     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWNLFYDRNDNC 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+           L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIETFSYNTSISAFMICVNELSG---------L 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ Q  I+L  F P +  +++++L 
Sbjct: 832 KCSKK-----------EILNQFIIVLAPFAPHVCEELWEMLG 862


>gi|238651004|ref|YP_002916860.1| valyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259516952|sp|C4K2L1|SYV_RICPU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|238625102|gb|ACR47808.1| valyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 812

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 118/335 (35%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E +   +S         Y   P  +   +R  E    + + +  L +           K 
Sbjct: 388 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADVTQLPIDPLKDLPMGYSKE 447

Query: 221 PDDPQY-IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY- 274
             +P Y +M  W  +  +   +T  + +          K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMISGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGM----IPTPGAFTESD 387
             G D  Y +D    +    L N + N           LK  D              E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNAAKFVFIHFDKLKGEDKKASLLDIKEKITNEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDR 443
           + +++    +++     +QN     A+            D Y +  K     +   NP  
Sbjct: 625 KWMVNKLVELVKLATNELQNYEYAHAMHLTEKFFWVVFCDNYLEISKTRSYDEEHKNPQG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 15/148 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  VAKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNA------GVTTKVFV-------DQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +         +    F+       +     FR + + + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNMDRSEFIKICEEVVESEEEKFRSLFNQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDE 133
            ++ +  +  K +IY       +   D 
Sbjct: 153 SQMSFLDLVQKEEIYLTNQPILWDPVDG 180


>gi|306830852|ref|ZP_07464014.1| isoleucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426875|gb|EFM29985.1| isoleucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 932

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 103/273 (37%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PA+L++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNAREGLEYPANLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 AVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D LK+             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILKQTSET------YRKIRNTLRFLIANTADFNPNTDAVAYENLRAVDKYMTVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            ++++  IR+  +          V++   V     Y D  K     +   + A   +   
Sbjct: 685 FNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEAADNLARRQMQTV 744

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADEN 483
              ++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FYDILVKITKLLTPILPHTAEEIWSYLEFEPEE 777



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFNLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKKGVKRKEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|221199257|ref|ZP_03572301.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205841|ref|ZP_03578856.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174679|gb|EEE07111.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180542|gb|EEE12945.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 945

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAQHAVPLDEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
             +    H  +A++ +  SE     Y D  K   L  + PD  +  +       + + L 
Sbjct: 722 YYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTALYHLTQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            +L  F+   A + + +   A +
Sbjct: 781 RVLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + D  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKTGFKRLGVLGDWADPYKTMNFVNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|332170512|gb|AEE19767.1| valyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 877

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 126/393 (32%), Gaps = 55/393 (13%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           V+    + +F ++       +       E  L  ++           ++D ++SR+   W
Sbjct: 350 VEPRLSDQWFLKMEELVKPAIKAVLETGEVKLFPKKFENTYRHWMENIRDWNISRQ-LWW 408

Query: 217 G--------------------------------------IKIPDDPQYIMYVWIDALTNY 238
           G                                      ++     +  M  W  +    
Sbjct: 409 GQQIPAYFYGEGKEDFVVAESVEDAVTLSRKRTGNDSLTVEDLRQDEDAMDTWFSSWLWP 468

Query: 239 LTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGF 295
           ++      +  +     ++P +  V G DIL F    +    +  +   P      +   
Sbjct: 469 MSVFDGVRNPDNEEFNYYYPTNDLVTGPDILFFWVARMIIAGYEYTDKRPFQNVYLTGLV 528

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLA 355
              +  K+SKSLGN  D +E+I+E G D +R  L+   A G D  +D+D LK+       
Sbjct: 529 RDKQRRKMSKSLGNSPDALELIKEYGADGVRVGLLLSSAAGNDLMFDEDLLKQGK----- 583

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
             I   +S    +   + D  IP P    +  E   +  ++ L EI ++     I  AL 
Sbjct: 584 GFIKKNLSAFSLIQGWEIDETIPQPAHSAQGIEWYTNRFNQTLLEIEDHFSKYRISDALM 643

Query: 416 QVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
               +V         +  KP   +  +           +        +L  F+P  + +I
Sbjct: 644 ASYKVVWNDFCGWLLEIVKPAYQQPIDRK----TYDAVIAAFENNLRILHPFIPFASEEI 699

Query: 474 FDILFV--ADENRCFQSLDQRLKPGFMLHKTFD 504
           +  +     +E        +  +    +   FD
Sbjct: 700 WQTIATRSPEEALIINKWPEGGEVNEQIIADFD 732



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
            RE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  NREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLLGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHD 104
                           +        + ++      D    L  S D      T +    +
Sbjct: 92  VARLKEQGIKKSDLTREEFLAHAWEWKEEYGGVILDQLKKLGASCDWERTAFTMDPAMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    +  + DKG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKTFVDLYDKGLIYRGYRMVNWDPEAKTTLSDEEVIH 190


>gi|325697075|gb|EGD38962.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 930

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +V+ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DVLVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        ++    L +S D      T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|325677854|ref|ZP_08157496.1| leucine--tRNA ligase [Ruminococcus albus 8]
 gi|324110408|gb|EGC04582.1| leucine--tRNA ligase [Ruminococcus albus 8]
          Length = 809

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H GH      +D+++R  R+ G +VL   G D  G    + 
Sbjct: 31  SKPKFYALDMFPYPSGVGLHAGHPEGYTASDIVSRMKRMQGYNVLHPMGYDSFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N + F      L   YD    I T++  ++   + ++K++   G  
Sbjct: 91  AVTTGNHPNGFTQENIKTFSKQLKELGFDYDWSKMIATSDPEYYKWTQWIFKQLYLDGYA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DEV  G           PV     + +     A+ +KLL  
Sbjct: 151 KYIDMPVNWCEELGTVLSNDEVIDGKS----ERGGYPVVRKNMKQWVIDQPAFAEKLLEG 206

Query: 180 YESHPEFILPIERRNEVI 197
            +           +   I
Sbjct: 207 LDEIDWPESTKSMQRNWI 224



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 94/269 (34%), Gaps = 47/269 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS--------AN 283
                Y+      +  +    K W P DL++ G +    H +Y   +             
Sbjct: 507 WYFLRYIDPHNDKEFANQELLKHWMPVDLYIGGPEHAVGHLMYSRIWNRYLYDKGLAPTK 566

Query: 284 LPLPKKVFSHGFILHKGEKISKSL-GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
            P  K V     +   G K+ K     V++P ++I + G D LR + +          + 
Sbjct: 567 EPFKKLVHQGMILGENGVKMGKRFPKYVVNPSDIIRDFGADTLRLYEMFMGPLEVSKPWS 626

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIR 402
           + G++         G    ++R  +   ++ +      GA T        V  + ++++ 
Sbjct: 627 QSGVE---------GAKRFLNRVWNFFTEESNITEDNNGALT-------KVYHQTVKKVT 670

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           ++ +    + A+AQ++  V+ V +  +   P E  +                   L  +L
Sbjct: 671 DDYEQLAFNTAIAQMMIFVNAVYK--NGSCPREYAEG------------------LIKML 710

Query: 463 QAFVPKLANKIFDILFVADENRCFQSLDQ 491
               P +  +I+ IL   D+   ++S   
Sbjct: 711 SCISPHIGEEIWSILG-HDDTIAYESWPT 738


>gi|304320117|ref|YP_003853760.1| isoleucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299020|gb|ADM08619.1| isoleucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 962

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 18/256 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + + T           +   WPADL++ G D     F +       L    
Sbjct: 571 ILDVWFDSGSTHATVLE------AREDLRWPADLYLEGSDQHRGWFQSSLLIGCGLRERA 624

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  KG K+SKSLGN + P +++++ G D LR ++       +D     +
Sbjct: 625 PFDGILTHGFVLDAKGYKMSKSLGNTVAPEDIVKKYGADILRIWVASSDYS-EDVRIGDE 683

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRVLQEIRE 403
            +   V  D    + N +  +++  LK ++    TP     E +  IL+  S V  E+  
Sbjct: 684 IIGSAV--DAYRKLRNTLRYALA-ALKGFEAAEKTPYADLDELERYILARVSEVHAEVVA 740

Query: 404 NMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLA 459
                  + A   V           YFD +K   L   +P   +   V  V   V+  L 
Sbjct: 741 GYSAFDFNAAWRAVTEFASMDLSAFYFDIRKD-CLYCDDPSLVKRRGVRTVMSIVLDYLL 799

Query: 460 ILLQAFVPKLANKIFD 475
             +   +P    + F 
Sbjct: 800 KWMAPIMPFTTEEAFH 815



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 77/252 (30%), Gaps = 28/252 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA--- 59
            R    +     Y N   H+G A+  ++ D + R  ++ G D  +  G D HG  I    
Sbjct: 55  GRPPFVLHDGPPYANGHIHMGTAFNKVLKDFVVRSRQMLGYDANYVPGWDCHGLPIEWKV 114

Query: 60  ------KAAQNAGVTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
                 K  +   V           F ++     R     L I   +DD   T       
Sbjct: 115 EEDFAAKGRKKKDVPPTEFRKACRAFAERWLSVQRAEFRRLGIEGDWDDPYLTMNYATEA 174

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                +    ++G +Y+G     +S  ++    + E+        Y+   + + W+    
Sbjct: 175 GTISQFLDFVERGLVYRGSKPVMWSPVEQTALAEAEIE-------YHDHQSTMIWVRFSF 227

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP 224
              +     +       +   + +P  R       +  G   +   R   D+    P   
Sbjct: 228 KPGQAPEGLEDASVLIWTTTPWTIPANRAVCYGPSLSYGAYRVDKVRDDLDF---TPWTK 284

Query: 225 QYIMYVWIDALT 236
              +Y   D L+
Sbjct: 285 AGEVYCLADNLS 296


>gi|325973221|ref|YP_004250285.1| leucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651823|gb|ADX97905.1| leucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 743

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 5/218 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    HIGH    + +D++AR+ ++ G  VL   G D  G    + 
Sbjct: 39  SKPKFYVLDMFPYPSGAGLHIGHVKGYLASDIVARYKKMKGFSVLHPMGWDSFGLPAEQY 98

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD---DFIRTTEKRHHDTCRILWKKISDKGD 118
           A         F ++N   FR+    L  SYD     I +++  ++   + L+ ++  +G 
Sbjct: 99  AIQNKADPSTFTEKNISRFREELKSLFFSYDFQNKEINSSDSSYYAITQWLFLQLYRRGL 158

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLL 177
                    +         ++E+Y+G DG++Y+ + N PV   + + +  +++ Y   L 
Sbjct: 159 ATLENKQVNWVEELHTVLANEEIYEGEDGKFYSERGNFPVTTRKLKQWVLKITKYAQALK 218

Query: 178 SYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                        + + E I   ++   +L +  K+F+
Sbjct: 219 EDLYKLEWTDRIKKIQEEWIGEKEAFKFELKIKGKSFE 256



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 52/356 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + +E   F   +         +  + +         E     K 
Sbjct: 355 WVFSRQRYWGEPFPVYYDKEGHIFLEENLPLKLPPFKFIENTKKYDTPLAYYEDWVNFKE 414

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G +    +   +           Y +   I     YL            +    P DL++
Sbjct: 415 GFRRDINTMPNWA------ASSWYFLAYLIKKGDGYLPLDSKEAIDLIERWM--PVDLYI 466

Query: 263 IGKDILRFHAIYWPAFLLSAN---------LPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
            G++    H IY   +    +          P  K V     +   G+K+SKS  N +  
Sbjct: 467 GGQEHATMHLIYARFWYKVIHSVLNLKTVSEPFKKLVNQGMILGSDGKKMSKSKNNYLSV 526

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
             ++E  G D +R  +          ++D      R  +   + I  + S         +
Sbjct: 527 ESLLESFGGDVIRLSVAFLGPLELTQYWDD-----RQLSTFESWIKKIYSYY-HQNSSYF 580

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
              IP             S     ++++  ++Q+   +  +++++   +           
Sbjct: 581 ADNIPEKDN---------SSVLEFIKKVEFSIQSFKFNVLVSELMIFFN----------- 620

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
             LK+ NP        V   +  Q    L    P +A +I+  L    E+    S 
Sbjct: 621 -YLKQQNPKSK-----VEHSIFIQFLSYLA---PSIAEEIWRELLGNKESVYLSSW 667


>gi|30249136|ref|NP_841206.1| isoleucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|81436203|sp|Q820M6|SYI_NITEU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30180455|emb|CAD85060.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 939

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 103/300 (34%), Gaps = 21/300 (7%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           +        + VW D+ T + T                PADL++ G D     F +    
Sbjct: 532 QHYQKLTDTLDVWFDSGTTHETVLKQNIQLRH------PADLYLEGSDQHRGWFQSSLLT 585

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +    P    +     +  +G K+SKS GNVI P ++ + +G D LR ++       
Sbjct: 586 GCAIDGCAPYTALLTHGFVVDGQGYKMSKSKGNVIAPQKIADTLGADILRLWVASTDYS- 644

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
             G         +   +    I N + R +   L D++       P  + E D  +L+  
Sbjct: 645 --GELSISDEILKRTVETYRRIRNTL-RFLLANLADFNLAADALPPAEWVEIDRYMLAYT 701

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPW---ELKKTNPDRASTVLY 449
           + +  ++    +    H+A+A++    SE     Y D  K      +    P R  +   
Sbjct: 702 AALQNDLLGFYERYEFHQAVARLHHFCSEDLGGFYLDILKDRLYTSMANGIPRR--SAQN 759

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIFPR 509
               ++  L  L    +   A +++  L  + E+  F            +      + PR
Sbjct: 760 ALYHIVHSLVRLFAPVLSFTAEEVWQELGESAEDSVFLHTWHCFPDQSEILSDAQILIPR 819



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 47  QGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIEHQ 106

Query: 62  AQNA--GVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            +           V +  R F    + +D    DF+R
Sbjct: 107 IEKKYGKHLPADQVRKLCRAFAQ--EQIDRQKADFMR 141


>gi|62185261|ref|YP_220046.1| valyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312583|sp|Q5L5J6|SYV_CHLAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|62148328|emb|CAH64095.1| valyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 940

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 81/392 (20%), Positives = 128/392 (32%), Gaps = 80/392 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  + +++D L  +  S    I P E     +++V   L+D  +SR+   W
Sbjct: 355 IEPYLSKQWFVSVDSFRDSLREFVASDAIKIFPPEFTKNYLTWVN-NLRDWCISRQ-LWW 412

Query: 217 GIKIP-------------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
           G +IP                                DP  ++  W  +    LT  G+ 
Sbjct: 413 GHRIPVWYHKSDAHRMLCYDGEGIPEEVAKDPESWEQDPD-VLDTWFSSGLWPLTCLGWP 471

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSH---------- 293
           D+  G   KF+P  + V G DIL F           +    P    VF H          
Sbjct: 472 DSECGDLEKFYPTAVLVTGHDILFFWVTRMVLLCSAMVGKKPFSD-VFLHGLIFGKSYKR 530

Query: 294 -------------------------GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                                      ++ K EK+SKS GNVIDP+E+I + G DA+R  
Sbjct: 531 YNDLGEWTYITGEEKYAYDMGKALPKGVIAKWEKLSKSKGNVIDPLEMIAKYGADAVRMA 590

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTE 385
           L      G+    D    ++  N   AN I N      S I       +           
Sbjct: 591 LCSCANRGEQIDLDYRLFEEYKN--FANKIWNGARFIFSHISNLTSQDLARGIDTTLLGL 648

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDR 443
            D  IL   +R+L+E+    QN    +                Y +  KP    K     
Sbjct: 649 EDYYILDGFNRLLKELHSAYQNYAFDKITTMAYEFFRNNFCSTYIEIIKPTLYGKQRSKE 708

Query: 444 ASTVLYVTVEVIR-QLAILLQAFVPKLANKIF 474
                   + V+   +  +L    P +   +F
Sbjct: 709 DQLTKQKLLAVLLVNILGVLHPIAPFVTETLF 740



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 62/178 (34%), Gaps = 24/178 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + DVL R+ R+ G +V +  GTD  G      
Sbjct: 35  SDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNAGVT-------------TKVFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +    +                 V Q             R +    D S   F  T E 
Sbjct: 95  VERHLYSSLGKRRVDFSREEFLEHVWQWKEKSEGVILSQLRQLGCSCDWSRLRF--TMEP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPV 157
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V
Sbjct: 153 LANRAVKKAFKILFDKGHIYRGNYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRVV 210


>gi|324993400|gb|EGC25320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995288|gb|EGC27200.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327461674|gb|EGF08005.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327489527|gb|EGF21320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 930

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +V+ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DVLVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        ++    L +S D      T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|126733331|ref|ZP_01749078.1| isoleucyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716197|gb|EBA13061.1| isoleucyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 963

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 96/270 (35%), Gaps = 12/270 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +        +          ADL++ G D     FH+    A     + 
Sbjct: 571 ILDVWFDSGSTHAFVLRDRADGSEDGM----ADLYLEGTDQHRGWFHSSMLQACGTMGHA 626

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  KG K+SKS+GN I P +V+++ G D LR ++ +      D     +
Sbjct: 627 PYRGVLTHGFTLDQKGMKMSKSIGNTIAPEQVVKQYGADILRLWVAQSDY-TADLRIGDE 685

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK    AD    + N V   +  +    +     P    E +  IL   + +  ++RE 
Sbjct: 686 ILKGV--ADSYRRLRNTVRFMLGSLSDFTEADRVEPADMPELERWILHRLAELDVQVREG 743

Query: 405 MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
                       V +   V     YFD +K       +  R      V   +  +LA  L
Sbjct: 744 YAKYDFQGVFQAVFTFATVELSAFYFDIRKDALYCDGDTTRRRAARTVLDILFHRLAKWL 803

Query: 463 QAFVPKLANKIF-DILFVADENRCFQSLDQ 491
              +     +++ +     D +   +   +
Sbjct: 804 APMLTFTMEEVWLERFGADDSSIHLEDFAE 833



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           + R+   +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I   
Sbjct: 50  EGRKPFTLHDGPPYANGHLHIGHALNKILKDMVVRSQQMMGRDARYVPGWDCHGLPIEWK 109

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMADVL-DISYDDFIR------------TTEKRHH 103
              K          V V    +  R  A+   DI  D+F R            T      
Sbjct: 110 IEEKYRAKGRDKDDVNVVDFRQECRKFAEGWVDIQRDEFKRLGVTGNWADPYLTMNFHAE 169

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 ++K    G +Y+G     +S  ++    + EV              PV
Sbjct: 170 RVIAEEFQKFLMNGTLYQGSKPVMWSPVEKTALAEAEVEYHDRQTDAIWVRFPV 223


>gi|222053500|ref|YP_002535862.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221562789|gb|ACM18761.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 924

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 129/419 (30%), Gaps = 32/419 (7%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK-----GCYSGWYSLRDEAYYNDDEVYKG 144
           SY    R  +          +  +       K        S       E  +   E    
Sbjct: 396 SYPHCWRCKKPIIFRATEQWFISMESNDLRRKALTEINTVSWIPKWGKERIFGMIENRPD 455

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                      P+     +         +         H   +   E  +         L
Sbjct: 456 WCVSRQRNWGVPITVFYCKACG------EALADGKIMHHVADLFEKESSDIWYEREAKEL 509

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
             L         G    D    I+ VW D+  ++     + DN         PAD+++ G
Sbjct: 510 --LPTGTTCPACGKTEFDKEMDILDVWFDSGVSHAAVLEHRDNLSS------PADMYLEG 561

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     FH+    +       P    +     +   G K+SKS+GNV+ P +VI++ G 
Sbjct: 562 SDQHRGWFHSSLLASVGTRGVAPYKAVLTHGFVVDGSGRKMSKSVGNVVAPEDVIKKYGA 621

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TP 380
           + LR ++  +     D    ++ L +   ++    I N   R +   + D+D        
Sbjct: 622 EVLRLWVAAQDY-RDDLRISQEILTRL--SEAYRRIRNTC-RYILGNIADFDPKRDSVDY 677

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-- 436
           G   E D   L     + +++ +  +N   H     V S   V     Y D  K      
Sbjct: 678 GDMPEIDRWALHQLELLKEKVLKAYENCEFHVLYHAVNSFCTVEMSAFYLDILKDRVYTS 737

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
           +K + +R  +      +++  L  L    +    ++++  +    E     S   +LKP
Sbjct: 738 RKDSVER-RSAQTAMYQILDALVKLTAPVLSFTTDEVWRYMPAPAEESVHLSQFPQLKP 795



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K  +     Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I   
Sbjct: 45  KGKPKYILHDGPPYANGHIHIGHALNKILKDIVLKSKRMSGFDAPYIPGWDCHGLPIELQ 104

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +    + K              +  +     +   + L +   +D+   T    +    
Sbjct: 105 VEKNLGSKKHEITKLEMRKQCREYAKKFVDIQKQEFERLGVLGEWDNPYLTMNYSYEGIT 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ G +YKG     +         + EV  
Sbjct: 165 AHELARFAENGGLYKGKKPVHWCSSCGTALAEAEVEY 201


>gi|312867136|ref|ZP_07727346.1| isoleucine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097265|gb|EFQ55499.1| isoleucine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 930

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 29/270 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+  +N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYENFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            Y   +++ ++  LL   +P  A +I+  L
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYL 771



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D    T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWDHPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|224011401|ref|XP_002295475.1| valyl-tRNA synthetase [Thalassiosira pseudonana CCMP1335]
 gi|209583506|gb|ACI64192.1| valyl-tRNA synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 989

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 121/392 (30%), Gaps = 84/392 (21%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEV-----ISFVKSGLKDLSLSRKT 213
            +E E  +F+            +      +P     +      +           ++R  
Sbjct: 411 PVEHEKTWFQWLDNIRDWCVSRQLWWGHQIPAWFATKKGEEGVLKTDMKSNDRWIVARSE 470

Query: 214 FDWGIK------------IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
            D   K            I +  + ++  W  +     +  G+ +  D  KA F+P  L 
Sbjct: 471 EDAYDKAEKLLGCSRDEIILERDEDVLDTWFSSGLFPFSVLGWPEETDDFKA-FYPTSLL 529

Query: 262 VIGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILH------KGEKISKSLGNVIDPIE 315
             G DIL F    W A ++   L L  K+  H   LH       G K+SKSLGNVIDP+E
Sbjct: 530 ETGLDILFF----WVARMVMMGLQLTDKLPFHTVYLHAMVRDKDGRKMSKSLGNVIDPLE 585

Query: 316 VI-------------------------------------EEVGVDALRYFLVREIACGKD 338
           VI                                      E G DALR+ L+     G+D
Sbjct: 586 VINGCTLETLLEKLEGGNLPPKEVARAKKDQEADFPEGIPECGSDALRFGLLAYTVQGRD 645

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES---------DES 389
              D   +             N +  +    L+      PT     E          D+ 
Sbjct: 646 VNLDMKRVVG------YRLFCNKLWNATRFALQFVSDFQPTANILEELMGSGKMAIRDKF 699

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRAS-- 445
           ++S      + + +   N     +     S       D Y +  KP    K++ ++ +  
Sbjct: 700 MISRLMACSETVNDCFANYKFGDSQMAAYSYWMNDVCDVYLELIKPVVYDKSDANKDNRW 759

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                    I     +L   +P +  +++  L
Sbjct: 760 AAQATLWVAIEAGLRILHPMMPFVTEELWQRL 791



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 19/160 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK  +           H+GHA    + D L R+HR+ G   L+  GTD  G       
Sbjct: 36  DSEKFVMVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHATLYIPGTDHAGIATQSVV 95

Query: 63  QNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
           +   +                     +  +           L  S D      T +    
Sbjct: 96  EKMIMKQSNQTRHDLGREAFISKVWEWKSEYGNRITTQLRRLGSSVDWSRERFTMDDMCS 155

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                 + +  + G +Y+    G +S   ++  +D EV  
Sbjct: 156 KAVVEAFNRFHEDGLLYRAERLGNWSCALKSAISDIEVDY 195


>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 922

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 102/264 (38%), Gaps = 18/264 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PADL++ G D     F++    + 
Sbjct: 517 FTKENDIMDVWFDSGSSHQGVLV-------ERGMKYPADLYLEGSDQHRGWFNSSLITSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGNVI P +V+++ G D LR ++   +    D
Sbjct: 570 AINGFAPYKGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMDQYGADILRLWVA-SVDYTAD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D LK+   +++   I N   R +   + D+D            E D+ +      
Sbjct: 629 VRISMDMLKQV--SEVYRKIRNTF-RFLHGNIADFDPTKDRVAYAELREMDQYVYMRLQD 685

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE- 453
           VL+ +R              V + V+      Y D  K     + + ++    +   +  
Sbjct: 686 VLKTVRTAYDRYDFAAVYHVVNNFVAVELSSFYLDIAKDVVYIEGSDNKDRRAMQTVIYD 745

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L  ++   +P   ++++  L
Sbjct: 746 TLMTLVKIMTPIIPHTTDEMWSYL 769



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   ++ D++ R   + G  V +  G D HG  I +A
Sbjct: 46  EGRPEYVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIEQA 105

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K             +  +   N R+    L I  ++++   T +        
Sbjct: 106 LTNKGVKRKEMSVAAFRQLCEEYAYEQIDNQRNQFRRLGIRGNWENPYITLKPEFEARQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 166 EVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|154710435|gb|ABS84280.1| TP0798-like protein [Treponema paraluiscuniculi]
          Length = 122

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 57/118 (48%)

Query: 6   KLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA 65
           +  I+ A+ Y N  PH+G+  + + ADV ARF R+ G    F  GTDE+G      A   
Sbjct: 3   RKLITAALPYVNNVPHLGNLIQGLSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQ 62

Query: 66  GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGC 123
           G++            RD+    D+S+D F RTT   H +  + L++ +  +G I +  
Sbjct: 63  GLSPAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFISEHE 120


>gi|194752459|ref|XP_001958539.1| GF10975 [Drosophila ananassae]
 gi|190625821|gb|EDV41345.1| GF10975 [Drosophila ananassae]
          Length = 1228

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 17/281 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       +    +      +PAD    G D     F+ +   +  L    
Sbjct: 533 VFDCWFESGSMPFAQQHFPFENEKDFMNNFPADFIAEGIDQTRGWFYTLLVISTALFNKA 592

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + S   +   G+K+SK   N  DP+EV+ + G DALR +L+       +    K+
Sbjct: 593 PFKNLIASGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINSPVVRAESLRFKE 652

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKD--------------YDGMIPTPGAFTESDESI 390
              + +  D+     N     +  I +                +  +      +  D  I
Sbjct: 653 EGVRDIIKDVFLPWYNAYRFLLQNIARYEKEDLGGKGQYIYERERHLKNMDKASVIDVWI 712

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +LQ   E M+   ++  + ++   + ++ + Y    +     +   ++    L 
Sbjct: 713 LSFKESLLQFFAEEMKMYRLYTVVPRLTKFIDQLTNWYVRLNRRRIKGELGAEQCIQSLD 772

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              +V+  +  ++  F P L   IF  L +       +  D
Sbjct: 773 TLYDVLYTMVKMMAPFTPYLTEYIFQRLVLFQPPGSLEHAD 813



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 72/233 (30%), Gaps = 23/233 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 44  KGKPKYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAYQQGYHVDRRFGWDCHGLPVEFE 103

Query: 62  AQN--AGVTTKV-----FVDQNSRNFRDMADVLD------------ISYDDFIRTTEKRH 102
                     +          N+   + +    D            I + +  +T    +
Sbjct: 104 IDKLMNIRGPEDVAKMGITAYNAECRKIVMRYADEWENIVTRVGRWIDFKNDYKTLYPWY 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ DKG +Y+G     YS       ++ E  +             ++ +  
Sbjct: 164 MESIWWIFKQLYDKGLVYQGVKVMPYSTACTTSLSNFEANQNYKEVVDPCVVIALEAVSL 223

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTF 214
              FF +            S+    + P     +V       L  L+ SR ++
Sbjct: 224 PNTFFLV---WTTTPWTLPSNFACCVHPTMTYVKVRDVKSDRLFILAESRLSY 273


>gi|171689990|ref|XP_001909927.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944950|emb|CAP71061.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1079

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 97/261 (37%), Gaps = 11/261 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         K +P D    G D     F+ +      L  
Sbjct: 519 EEVFDCWFESGSMPYASKHYPFENKEEFEKSFPGDFIAEGLDQTRGWFYTLLVLGTHLFG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
             P    V +   +   G+K+SK L N  DP  V+ + G DALR +L+       +   +
Sbjct: 579 ISPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTVVMSKYGSDALRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSR----SVSMILKDYDGMIPTPGAFTES---DESILSVC 394
            + G+K+ V   L     +        ++   +++ D         +     D+ IL+ C
Sbjct: 639 KESGVKEVVAKVLLPFWNSYKFFEGQVALLKKVENIDYKFDPSMESSNINVMDKWILASC 698

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +L+ + E M    ++  + +++ L+    + Y    +     +   +     L    E
Sbjct: 699 QSLLKFVNEEMAAYRLYTVVPKLLELIDNTTNWYIRFNRKRLKGENGLEDTLHALNTLFE 758

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           V+  L   L  F P L + I+
Sbjct: 759 VLLTLCRGLAPFTPFLTDTIY 779



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 19/136 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA-- 62
                     +    PH GH     I D++ R+  + G  V    G D HG  I      
Sbjct: 33  PNYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGFHVERRFGWDTHGLPIEHEIDK 92

Query: 63  ---------------QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDT 105
                          +      +  V + S  +R   + L   I +D+  +T +    ++
Sbjct: 93  KLGISGKAAVMEMGLEKYNEECRGIVMRYSEEWRHTIERLGRWIDFDNDYKTMDPTFMES 152

Query: 106 CRILWKKISDKGDIYK 121
              ++K++ DKG++Y+
Sbjct: 153 EWWVFKQLFDKGEVYQ 168


>gi|84029563|sp|Q983N4|SYI_RHILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 993

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 19/261 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + ++ T              WPAD+++ G D     FH+    + 
Sbjct: 585 WKQVMDILDVWFDSGSTHVFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLLESC 638

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    V     +   G K+SKSLGN + P +VI++ G D LR ++V      +D
Sbjct: 639 GTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDVIKQSGADILRLWVVTTDY-WED 697

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K+ L+   N D    + N +   +  +  D DG      A  E +  +L   + + 
Sbjct: 698 QRLGKNVLQ--TNIDAYRKLRNTIRWMLGTLAHD-DGETVPLEAMPELERLMLHRLAELD 754

Query: 399 QEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNP---DRASTVLYVTVE 453
           + +R+        R    ++    V     YFD +K   L    P    R ++V  V   
Sbjct: 755 EVVRQGYDAFEFKRITRALVDFMVVELSAFYFDIRKD-ALYCDAPSSVKRKASVQ-VVRH 812

Query: 454 VIRQLAILLQAFVPKLANKIF 474
           +   L   L   +P    + +
Sbjct: 813 LFDCLVKWLAPMLPFTMEEAW 833



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 27/63 (42%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GRTKYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSTYVPGWDCHGLPIEWKI 112

Query: 63  QNA 65
           +  
Sbjct: 113 EEQ 115


>gi|322392785|ref|ZP_08066243.1| isoleucine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144363|gb|EFX39766.1| isoleucine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 930

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 103/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVIVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSTND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L +             +  ++  ++ +     PT            D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPTEDTVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+  +N         +++   V     Y D  K     ++       +  TV
Sbjct: 685 FNQLVKTIRDAYKNFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIESAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFETEE 777



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D    T    +     
Sbjct: 105 LAKQGVKRKEIERSEYLKMCREYALSQVDKQREDFKRLGVSGDWDHPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGQMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|257439835|ref|ZP_05615590.1| isoleucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197744|gb|EEU96028.1| isoleucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 930

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 115/395 (29%), Gaps = 36/395 (9%)

Query: 96  RTTEKRHHDTC-RILWKKISDKGDIYK--GCYSGWYSLRDEAYYNDDEVYKGADGQYYNA 152
           R           +        + D+YK             +                   
Sbjct: 411 RCHNPIIFRATEQWFCSVAKFRDDVYKAIDTVKWMPDWGHDRMKGMVRDRNDWCISRQRT 470

Query: 153 QHNPVQ-WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
              P+  +  ++   + ++    K +S            +   E I         +    
Sbjct: 471 WGVPIPAFYCKKCGAYHITDATIKAVSELFRKEGSDAWYKYEAEQI---------IPAGE 521

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                G         IM VW D+ + +                 +PAD+++ G D     
Sbjct: 522 VCEKCGASEWTKDTDIMDVWFDSGSTHAAVLEERP------ELRFPADMYMEGGDQFRGW 575

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +       P    +     +  +G+++ KS GN ++P E+I++ G D +R ++
Sbjct: 576 FQSSLLTSVAAKGCAPYKSVLCHGWVVDEQGKQMHKSAGNGVEPSEIIKDYGADIIRLWV 635

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFT 384
                   D    K+  K+   A         +  +   IL + DG  P           
Sbjct: 636 ASSDYTV-DVRAGKNIFKQLSEA------YRKIRNTARFILGNLDGFDPNTDCVADDQLQ 688

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPD 442
           E D   L+    ++   +        ++    V +       + Y D  K   L  TN  
Sbjct: 689 EIDRWALAALDDLIVNAKAGYDVYDFNKVYHAVYNFCVVAMSNFYLDVTKD-RLYCTNGV 747

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                     +++  L  ++   +   + +I+D L
Sbjct: 748 GRKAAQTTMYKILVALDKIIAPILCFTSQEIWDFL 782



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 53/161 (32%), Gaps = 15/161 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K  +     Y N   H+G A   II D++ R   ++G    +  G D HG  I   A
Sbjct: 51  GKPKFVLHDGPPYANGNIHMGTALNKIIKDIIIRDKNMEGFQAPYVPGFDTHGLPIELKA 110

Query: 63  -------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
                               + F  ++     D    L +  D      T +        
Sbjct: 111 LSSLGEKKKDISKLELRQICEKFATEHIDIMSDQFKRLGVIGDFEHPYLTLKPEFEARQI 170

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
            ++ +++ KG IYKG    ++         + E+  G D  
Sbjct: 171 EIFGEMAKKGYIYKGLKPVYWCPDCRTALAEAEIEYGEDDC 211


>gi|312872405|ref|ZP_07732474.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091987|gb|EFQ50362.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 928

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 108/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  E   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++     ++ +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|16330137|ref|NP_440865.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501011|sp|P73505|SYI_SYNY3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1652625|dbj|BAA17545.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 988

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 70/446 (15%), Positives = 129/446 (28%), Gaps = 52/446 (11%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI-----YKGCYSGWYSLRDEAY 135
           ++ A      YD   RT +          +  +    D       +  +           
Sbjct: 403 KEEAYEHKYPYDW--RTKKPTIFRATEQWFASVEGFRDQALKAIKEVTWIPTQGENRITP 460

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
              D        Q       PV + EE           + +                  E
Sbjct: 461 MVGDRSDWCISRQRAWGVPIPVFYDEETSEPLLTEETINHVQQIIAEKGSDAWWELTVEE 520

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
           ++                     +     +  M VW D+ +++            ++   
Sbjct: 521 LLPEAYRNNG-------------RTYRKGEDTMDVWFDSGSSWAAVAN-----AKNRPLK 562

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           +P D+++ G D     F +    +  ++   P    +     +  KG K+SKSLGNV+DP
Sbjct: 563 YPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGHKMSKSLGNVVDP 622

Query: 314 IEVIEE---------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
            ++I            G D LR ++   +    D    +  LK+         I N +  
Sbjct: 623 YQIINGGKNQKQEPAYGADVLRLWVA-SVDYANDVPIGQGILKQ------LVDIRNKIRN 675

Query: 365 SVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           +   +L +     P   A       E D  +L   + V  E+ E  ++    +    V +
Sbjct: 676 TARFLLGNLHDFNPETDAVAYEDLPELDRYMLHRMTEVFTEVTEAYESFQFFKFFQTVQN 735

Query: 420 L--VSEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              V   + Y D  K        N  R  +   +    +  L   +   +  LA  I+  
Sbjct: 736 FCVVDLSNFYLDIAKDRLYISAPNAPRRRSCQTILQLALENLTKAIAPVLCHLAEDIWQF 795

Query: 477 LFVADENRC-FQSLDQRLKPGFMLHK 501
           L         FQS    L   +   +
Sbjct: 796 LPYEKPTESVFQSGWVNLDAQWQQPQ 821



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA---- 59
           ++   +     Y N   H+GHA   ++ D++ ++  L G  V +  G D HG  I     
Sbjct: 50  KDLFVLHDGPPYANGALHMGHALNKVLKDIINKYKLLQGHKVHYVPGWDCHGLPIELKVL 109

Query: 60  ---KAAQNAGVTT-------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
              K+++ A +T        + F  +  +          I   +     T    +     
Sbjct: 110 QSLKSSERAELTPLTLRHKARDFALKAQQEQAVGFQRYGIWGDWKKPYLTLTPEYEAAQI 169

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  ++ KG IY+G     +S        + E+  
Sbjct: 170 GVFGAMALKGYIYRGLKPVHWSPSSRTALAEAELEY 205


>gi|188997007|ref|YP_001931258.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|259511518|sp|B2V9T1|SYI_SULSY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188932074|gb|ACD66704.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 939

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 122/348 (35%), Gaps = 13/348 (3%)

Query: 134 AYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERR 193
            YY  + +    + +          W      F+  +  +         H   ++  +  
Sbjct: 438 PYYGQNRIKSMVENRPDWCISRQRSWGVPITVFYCENCGEIVKDMEVFEHVANLIKNDEF 497

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
              I F K   + L    K    G +     + I+ VW D+  ++     Y +     + 
Sbjct: 498 GADIWFEKLVKELLPEGYKCKKCGGQEFKKEEDILDVWFDSGVSHAAVLKYGEW----EE 553

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
             WPAD+++ G D     F +    +       P    +     +  KG K+SKS GNV+
Sbjct: 554 LRWPADMYLEGSDQHRGWFQSSLLESVASYNRAPYDTVLTHGFTLDEKGRKMSKSAGNVV 613

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P +VI+E G D LR ++V E    +D     + +K+   A+    I N     +  +  
Sbjct: 614 APEKVIKEYGADILRLWVVTEDY-TEDIKIGFNLIKRI--AEDYRKIRNTFRYFLGNLYD 670

Query: 372 -DYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYF 428
            + +          E D  +LS    ++Q   ++ +    H+    + +   V     Y 
Sbjct: 671 FNPNQDYVPYENLLEIDRWMLSKLQNIIQIADKSYEEGKFHKIYHTIKNFVIVDLSAIYL 730

Query: 429 DAQKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           D  K    +         +   V  E++  L  +L   +   A +++ 
Sbjct: 731 DILKDRLYVYAPKSLERKSAQTVLWELLLSLNKILAPIISFTAEEVWQ 778



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++K  +     Y N   HIGHA   I+ D+L ++  + G D  F  G D HG  I + 
Sbjct: 45  KGKDKYILHDGPPYANGHIHIGHALNKILKDILVKYQSMKGKDAPFVPGWDCHGLPIEQQ 104

Query: 62  AQNAGVT----------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                      + +  +     ++    L I  +++    T    + 
Sbjct: 105 VEKELKEKKIKKEDLSKSEFRKLCREYALKFVNIQKEEFKRLGIIGNWEKPYLTMRPSYQ 164

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +   ++ +KG  Y+G    ++ + D+    + E+  
Sbjct: 165 AQEVLELGRVFNKGVAYRGKKPVYWCIYDKTAEAEAEIEY 204


>gi|315653381|ref|ZP_07906303.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489306|gb|EFU78946.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 928

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/309 (19%), Positives = 114/309 (36%), Gaps = 26/309 (8%)

Query: 193 RNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSK 252
                   K  L D   S  + +       D   I+ VW D+ +++              
Sbjct: 492 MAWFTKTAKELLPDGFTSSHSPNCEFTKEKD---ILDVWFDSGSSHTAVMAQRP------ 542

Query: 253 AKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
              +PADL++ G D     F++    +  +S   P  + +     +  KG K+SKSLGNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
           I P +VI+++G + +R ++        D    +D LK+      A      V  ++  +L
Sbjct: 603 IAPNDVIKQMGAEIIRLWVAGADT-TSDVAVSQDILKQ------AAESYRKVRNTMRFML 655

Query: 371 KDYDGMIPTP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SE 423
            +     P          +  D+ +    +++L E  E   +         V S +    
Sbjct: 656 ANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDL 715

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDILFVADE 482
              Y D  K     ++   +A   +   +   + +LA LL   +P    +I+  L   ++
Sbjct: 716 SSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLKEPEK 775

Query: 483 NRCFQSLDQ 491
                ++ +
Sbjct: 776 FVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|145589920|ref|YP_001156517.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048326|gb|ABP34953.1| Isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 953

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 18/275 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWP-----ADLHVIGKDIL--RFHAIYWPAFLL 280
           + VW D+ T +          +   A+        ADL++ G D     FH+      +L
Sbjct: 546 LDVWFDSGTTHWHVIRGSHRDELLTAEAETPQGRLADLYLEGSDQHRGWFHSSLLTGAML 605

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P    +     +  +G K+SKS+GNVI P +V +++G + +R ++      G+   
Sbjct: 606 DGKPPYKALLTHGFTVDGQGRKMSKSVGNVIAPQQVADKLGAEIIRLWVASTDYSGEMTI 665

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVL 398
            D+  + KRV  +    I N + R +   L D+D          + E D   L++ +++ 
Sbjct: 666 SDE--ILKRV-TESYRRIRNTL-RFLLANLSDFDHAKHAMPVDQWLEIDRYALALANQLQ 721

Query: 399 QEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL--KKTNPDRASTVLYVTVEV 454
           +++  + +      A+A+++S  SE     Y D  K         +PDR          +
Sbjct: 722 EDVEAHYKAYEFQPAVARMLSFCSEDLGGFYLDIIKDRLYTSAPNSPDR-RAAQNALFHI 780

Query: 455 IRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
            R L   L  F+   A + +       +N+  +S+
Sbjct: 781 TRNLLKWLSPFLSFTAEEAWKDFPHGSDNQASESI 815



 Score = 66.7 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 12/153 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            + K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 49  NQPKFILHDGPPYANGDIHIGHAVNKILKDMIVKSRWLMGFDSAYVPGWDCHGMPIEIQI 108

Query: 63  QNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           +                + +        +   + L +   +++   T   R+        
Sbjct: 109 EKQFGKNLPTAEVQAKARAYAQVQIDKQKKDFERLGVLGDWNNPYLTMNFRNEADEIRAL 168

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            KI +KG +++G     +     +   + EV  
Sbjct: 169 GKIWEKGYVFRGLKPVNWCFDCGSALAEAEVEY 201


>gi|159041762|ref|YP_001541014.1| isoleucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920597|gb|ABW02024.1| isoleucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 991

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 12/265 (4%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                ++  VW+D+   ++             +K +P D      D     F+++   + 
Sbjct: 526 WVREPFVGDVWLDSGVAWIAGVD-GLRNRELWSKLYPYDWVTEAVDQTRGWFYSLLATSV 584

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    + +   +   G+K+SKS GNVI   +++   G D  R +L  + A  + 
Sbjct: 585 AWMGKAPYKTILITGHVVDKYGQKMSKSKGNVIWARDLMSRYGADVTRLYLASKAAPWET 644

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRS-VSMILKDYDGMIPTPGAFTE----SDESILSV 393
              + D      N  +   + N V  + + M L +YD    +           D+ +LS 
Sbjct: 645 LPVNPDEFSGIRN--ILTVLWNSVRFADMYMRLDNYDPRGHSINEVLPKAKSEDKWMLSR 702

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               L  I + +    IH A  + ISL+       Y    +     + + D    V  V 
Sbjct: 703 YFSRLSRITQYLDEFRIHEAAREWISLIVDDVSHGYIRLIRRRVWVEGSDDDKLVVYTVL 762

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
             V++   ++   F P +   ++  
Sbjct: 763 YNVLKGAIVIGSVFTPFITEYLYKA 787



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 21/161 (13%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
                     N  PH+GH       D++ R+ RL G  +    G DE G  +    +   
Sbjct: 43  FTFLEGPPTTNGFPHVGHVRGRTYKDIVLRYMRLKGYSLWVQGGWDEQGLPVEIEVERRL 102

Query: 66  -GVTTKVFVDQNSRNFRDMADVLDISY-----------------DDFIR--TTEKRHHDT 105
              T K   D+             + Y                 D      T    + + 
Sbjct: 103 GVKTKKDIFDKIGAERFSEECNSLVDYYLKYWVEDGTKRLGLWLDVEHAYETRRPYYIEH 162

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                K + +KG + +      +  R E   +D EV +G +
Sbjct: 163 VWAFIKNMHEKGLLTEDYRVLPFCPRCETALSDAEVDQGYE 203


>gi|330432294|gb|AEC17353.1| isoleucyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 939

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 121/363 (33%), Gaps = 41/363 (11%)

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLS 210
           +   V+W+ + G     +  +++          + +P+      E  +     L+ +   
Sbjct: 441 EIKEVRWVPDWGQARIEAMVENRPDWCISRQRTWGVPLTLFIHKETEALHPRTLELIEEV 500

Query: 211 RKTF-DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKA 253
            K     GI+   D                    + VW D+ + Y +   +     G+  
Sbjct: 501 AKRVEQKGIQAWWDLDINEVLGEDAQDYQKVPDTLDVWFDSGSTYSSVVKHRAEFGGND- 559

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
                D+++ G D     F +    +       P  + +     +  +G K+SKS+GN++
Sbjct: 560 ----VDMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIV 615

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P EV+++ G D LR ++      G+      +  K+      A      +  +   +L 
Sbjct: 616 TPQEVMDKFGGDILRLWVASSDYTGE-IAVSDEIFKR------AADTYRRIRNTARFLLA 668

Query: 372 DYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--V 424
           + +G  P      P      D   ++   +   +I+E   N   H  + +++   S    
Sbjct: 669 NLNGFDPKRDMVQPEEMIVLDRWAVACALQAQNDIKEAYDNYQFHEVVQRLMRFCSIEMG 728

Query: 425 DRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             Y D  K  +   K +     +       +   L   +   +   A++I+  L      
Sbjct: 729 SFYLDIIKDRQYTTKADSLARRSCQTALYHIAEALVRWIAPILSFTADEIWQYLPGERSE 788

Query: 484 RCF 486
             F
Sbjct: 789 FVF 791



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 67/226 (29%), Gaps = 16/226 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 50  KGKKTFILHDGPPYANGTIHIGHAVNKILKDIIVKSKTALGYDSPYIPGWDCHGLPIELK 109

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D    T         
Sbjct: 110 VEGLVGKPNEKVSAAEFREACRVYAKEQVEGQKKDFIRLGVLGDWDHPYLTMNFETEANI 169

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGY 165
                 +   G +YKG     + L   +   + EV Y          + N V        
Sbjct: 170 IRTLANVIKNGHLYKGSKPVHWCLDCGSALAEAEVEYYDKTSPSIYVRFNAVDEDAVLAK 229

Query: 166 FFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           F      + K+ +   +   + LP  R   +   ++  L  ++  R
Sbjct: 230 FNLSEKGEGKISAVIWTTTPWTLPSNRAIALHPELEYQLVQVNGER 275


>gi|298373987|ref|ZP_06983945.1| leucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|301311782|ref|ZP_07217707.1| leucine--tRNA ligase [Bacteroides sp. 20_3]
 gi|298268355|gb|EFI10010.1| leucine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|300830342|gb|EFK60987.1| leucine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 946

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH    I +D+ +RF RL G +VL   G D +G    +
Sbjct: 28  TNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++    N   +R+  + +   YD    IRT +  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPEITTKNNIARYREQLEKIGFCYDWSREIRTCDPEYYKWTQWAFIRMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 92/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDLLDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E+           L
Sbjct: 785 QVTDAEPT-ADE--LKSLHKLIKKVTFDIEHFSYNTSISAFMICVNELT---------SL 832

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +              ++  L  LL  F P +  +++  L 
Sbjct: 833 KCSKRA-----------ILEPLITLLAPFAPHITEELWHQLG 863


>gi|262383119|ref|ZP_06076256.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295997|gb|EEY83928.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 946

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH    I +D+ +RF RL G +VL   G D +G    +
Sbjct: 28  TNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++    N   +R+  + +   YD    IRT +  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPEITTKNNIARYREQLEKIGFCYDWSREIRTCDPEYYKWTQWAFIRMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 92/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDLLDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E+           L
Sbjct: 785 QVTDAEPT-ADE--LKSLHKLIKKVTFDIEHFSYNTSISAFMICVNELT---------SL 832

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +              ++  L  LL  F P +  +++  L 
Sbjct: 833 KCSKRA-----------ILEPLITLLAPFAPHITEELWHQLG 863


>gi|256838315|ref|ZP_05543825.1| leucyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256739234|gb|EEU52558.1| leucyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 946

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH    I +D+ +RF RL G +VL   G D +G    +
Sbjct: 28  TNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++    N   +R+  + +   YD    IRT +  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPEITTKNNIARYREQLEKIGFCYDWSREIRTCDPEYYKWTQWAFIRMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 92/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDLLDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E+           L
Sbjct: 785 QVTDAEPT-ADE--LKSLHKLIKKVTFDIEHFSYNTSISAFMICVNELT---------SL 832

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +              ++  L  LL  F P +  +++  L 
Sbjct: 833 KCSKRA-----------ILEPLITLLAPFAPHITEELWHQLG 863


>gi|303238222|ref|ZP_07324758.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
 gi|302594268|gb|EFL63980.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
          Length = 176

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 2/175 (1%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
           ++I  A  Y N   HIGH   ++  D+LAR+ RL G +V + +G+D HG  I   A   G
Sbjct: 3   VFIGGAWPYANGSLHIGHIAALLPGDILARYFRLKGYNVCYVSGSDCHGTPIQIRANKEG 62

Query: 67  VTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSG 126
           V+ +   ++   +F+   D L  SYD + +T +  H    +  +  + + G IYK     
Sbjct: 63  VSPEQIANRYHNDFKGCFDKLGFSYDLYNQTNDPYHSSFVQDFFTNLLNSGYIYKKTIEQ 122

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
            Y    + +  D  V             + +    ++ Y   L            
Sbjct: 123 AYCESCDQFLPDRFVV--GKCPNCGFYWDILHLTHQDKYMKLLQQIIKYFNFCIW 175


>gi|221211478|ref|ZP_03584457.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168839|gb|EEE01307.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 945

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 17/263 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +                 +PADL++ G D     FH+    A +L    P
Sbjct: 550 LDVWFDSGTTHWHVLR----GSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMLDGRAP 605

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G K+SKSLGN +DP EV   +G + +R ++      G+     ++ 
Sbjct: 606 YKGLLTHGFTVDGEGRKMSKSLGNGVDPHEVANRLGAEIIRLWIASTDYSGE-LAISEEI 664

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIRE 403
           LK+    +    I N + R +   L D+D          + E D   ++  +++  E+  
Sbjct: 665 LKRV--TEGYRRIRNTL-RFLLANLSDFDYAQHAVPVDEWLEIDRYAVAFSAQLQTELLA 721

Query: 404 NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIRQLA 459
             +    H  +A++ +  SE     Y D  K   L  + PD  +  +       + + L 
Sbjct: 722 YYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKD-RLYTSAPDSRARRSAQTALYHLTQGLL 780

Query: 460 ILLQAFVPKLANKIFDILFVADE 482
            +L  F+   A + + +   A +
Sbjct: 781 RVLAPFLSFTAEEAWKVFQPASD 803



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 54  KGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQ 113

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   + D  +T    +       
Sbjct: 114 IEKQFGKSLPAAEVMSKARAYATEQIEKQKAGFKRLGVLGDWADPYKTMNFVNEAEEIRA 173

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI +KG +Y+G     +     +   + EV  
Sbjct: 174 LGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEY 207


>gi|322375668|ref|ZP_08050180.1| isoleucine--tRNA ligase [Streptococcus sp. C300]
 gi|321279376|gb|EFX56417.1| isoleucine--tRNA ligase [Streptococcus sp. C300]
          Length = 926

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 108/283 (38%), Gaps = 24/283 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
             +V+ ++  LL   +P  A +I+  L F A+E      L + 
Sbjct: 747 --DVLVKITKLLTPILPHTAEEIWSYLEFEAEEFVQLSELPEA 787



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 928

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 108/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  E   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++     ++ +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|171913427|ref|ZP_02928897.1| leucyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 863

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 6/168 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K ++     YP+ Q  H+GH       D++AR+ R+ G +VL   G D  G    + 
Sbjct: 41  SKPKYFVLDMFPYPSGQGLHVGHPEGYTATDIVARYKRMTGHNVLHPMGWDAFGLPAEQY 100

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   +   ++N  NFR+    L  +Y  D  + TT+  +    + ++ ++ +    
Sbjct: 101 AIKTGQHPRTTTEKNVENFRNQLKRLGFAYDWDREVNTTDPGYFKWTQWIFTQLYNSYFD 160

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                +      +    + DE+      +       PV W  E G   
Sbjct: 161 PATKMARPVQELEAQGLSRDEIDAR---RLAFVSEAPVNWCPELGTVL 205



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 113/344 (32%), Gaps = 45/344 (13%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y  +  PV W +              L    +       P    ++ + +V+      
Sbjct: 466 QRYWGEPFPVIWEDGRHRVVPEGDL-PVLPPDLDDFKPTGTPEPPLSKAVDWVRYSETAT 524

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                   W        +Y          +            GS  K    DL+V G + 
Sbjct: 525 RELNTMPQWAGSCWYYLRYCDPKNSGRFIS----KEADAYWMGSSGKPGGVDLYVGGTEH 580

Query: 268 LRFHAIYWPAFLLSAN--------LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y   +              P  K V     +    +K+SKS GNV++P +VI E
Sbjct: 581 AVLHLLYARFWHKVLYDLGHVVTPEPFQKLVNQGLILGEDSQKMSKSRGNVVNPDDVIVE 640

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY---DGM 376
            G D+LR + +      +   +   G++         G+   ++R   ++L+     +  
Sbjct: 641 YGADSLRLYEMFMGPLEQVKPWSMKGVE---------GVYRFLARVWRLVLESNQEGEWT 691

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +         D+ +  V    ++++ E+++    + A++Q++ L                
Sbjct: 692 LSPQLHDVPVDKKLNKVIHETIKKVGEDIERLGFNTAISQMMVL---------------- 735

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
             TN   A+ V  V    +  L  +L  F P +  ++   L  A
Sbjct: 736 --TNAFTAAEVRPVA--GVATLLQVLNPFAPHVTEELQARLATA 775


>gi|4836216|gb|AAD30388.1|AF096862_2 isoleucyl-tRNA synthase [Fervidobacterium pennivorans DSM 9078]
          Length = 897

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 104/268 (38%), Gaps = 15/268 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G K  +     + VW+D+  ++            SK + +P DL++ G D     F
Sbjct: 491 CPACGSKNFEKTHDTLDVWMDSGCSWEAVIR-------SKGERFPVDLYLEGDDQHRGWF 543

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +  + +   +   P    V        +G K+SKSLGNVIDP+E++ + G D LR ++ 
Sbjct: 544 QSSIFLSTAKAGTAPFKAVVTHGFIKDEQGRKMSKSLGNVIDPMEIVNKYGADILRLWVA 603

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  +    K+ ++++V  ++   + N +   +S +    +  +         D+  
Sbjct: 604 STD-FFDNIRVGKNIIEQQV--EVYRKLRNTLRYLLSNLYDFTEADLLPYEKLLPLDKWA 660

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-YFDAQKPW-ELKKTNPDRASTV 447
           L    + +++I +  +     +     +    +E+   Y D  K    ++  +     + 
Sbjct: 661 LGRLQKFIEQITQYYEGFEYSKVYNATVKYCTTELSAVYLDILKDRLYVEAKDSIYRRSA 720

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
                 ++  L  +L   +P  A + + 
Sbjct: 721 QTALHYILEALIKILAPIIPFTAEEAYQ 748



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 16/216 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
               +     Y N   H+G A   I+ D + R+  + G  V F  G D HG  I      
Sbjct: 33  PTYLLHDGPPYANGDIHLGTAMNKILKDFVTRYKTMRGYRVPFVPGWDTHGLPIEHRVTT 92

Query: 60  --------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRIL 109
                   K+        K F  +     R+    L +  D      T +  +      +
Sbjct: 93  SLGEEAKKKSPAEIRKLCKEFALKYVDIQREEFKRLGVKGDWEHPYITLDPDYEYHILDV 152

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +K + + G++Y+G    ++         + E+ Y   +      +   V   +     + 
Sbjct: 153 FKTLVENGNVYRGNKPVYWCPTCRTALAEAEIEYHDHESPSIYVKFQMVDKPDTYIVIWT 212

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            + +          HP++     + +E    V  GL
Sbjct: 213 TTPWTIPANVAIALHPDYTYVKIKVDEEYWIVAEGL 248


>gi|84028269|sp|Q9XDB4|SYI_FERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 912

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 104/268 (38%), Gaps = 15/268 (5%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               G K  +     + VW+D+  ++            SK + +P DL++ G D     F
Sbjct: 506 CPACGSKNFEKTHDTLDVWMDSGCSWEAVIR-------SKGERFPVDLYLEGDDQHRGWF 558

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +  + +   +   P    V        +G K+SKSLGNVIDP+E++ + G D LR ++ 
Sbjct: 559 QSSIFLSTAKAGTAPFKAVVTHGFIKDEQGRKMSKSLGNVIDPMEIVNKYGADILRLWVA 618

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESI 390
                  +    K+ ++++V  ++   + N +   +S +    +  +         D+  
Sbjct: 619 STD-FFDNIRVGKNIIEQQV--EVYRKLRNTLRYLLSNLYDFTEADLLPYEKLLPLDKWA 675

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLV-SEVDR-YFDAQKPW-ELKKTNPDRASTV 447
           L    + +++I +  +     +     +    +E+   Y D  K    ++  +     + 
Sbjct: 676 LGRLQKFIEQITQYYEGFEYSKVYNATVKYCTTELSAVYLDILKDRLYVEAKDSIYRRSA 735

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFD 475
                 ++  L  +L   +P  A + + 
Sbjct: 736 QTALHYILEALIKILAPIIPFTAEEAYQ 763



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 16/216 (7%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
               +     Y N   H+G A   I+ D + R+  + G  V F  G D HG  I      
Sbjct: 48  PTYLLHDGPPYANGDIHLGTAMNKILKDFVTRYKTMRGYRVPFVPGWDTHGLPIEHRVTT 107

Query: 60  --------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRIL 109
                   K+        K F  +     R+    L +  D      T +  +      +
Sbjct: 108 SLGEEAKKKSPAEIRKLCKEFALKYVDIQREEFKRLGVKGDWEHPYITLDPDYEYHILDV 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +K + + G++Y+G    ++         + E+ Y   +      +   V   +     + 
Sbjct: 168 FKTLVENGNVYRGNKPVYWCPTCRTALAEAEIEYHDHESPSIYVKFQMVDKPDTYIVIWT 227

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
            + +          HP++     + +E    V  GL
Sbjct: 228 TTPWTIPANVAIALHPDYTYVKIKVDEEYWIVAEGL 263


>gi|329919670|ref|ZP_08276648.1| leucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328937322|gb|EGG33746.1| leucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 804

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 7/219 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +         E +   I           +      + +
Sbjct: 204 LDDLDWPESIKEMQRNWIGRSYGAQITFQVENTNLTFDV 242



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|187933434|ref|YP_001887335.1| leucyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721587|gb|ACD22808.1| leucine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 816

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  Q H GH +     D  AR  R+ G +V    G D  G      A 
Sbjct: 31  KKLYTLEMFSYPSGAQLHAGHWFNYGPTDSWARLKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + L+ K+ +KG  Y+
Sbjct: 91  KTGIHPKDSTFKNIETMEKQLKSMGAMFNWENEVVTCSPDYYKWTQWLFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G          + V   +   +FF+++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVVDG----LCERCESEVIKKDLIQWFFKITDYADELLDKLD 206

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI--KIPDDPQYIMYV 230
                      +   +           +   + ++ +     D    + YV
Sbjct: 207 GLDWPEKTKSMQKHWVGRSYGAQVTFKVKDSSLEFDVFTTRVDTLNGVTYV 257



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 111/383 (28%), Gaps = 53/383 (13%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
           Q Y     PV + +E G            L Y             + E            
Sbjct: 422 QRYWGAPIPVIYCDECGIVPVPEKDLPVELPYNVEFTPDGKSPLGKCEEFINTTCPHCGK 481

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
              R+       +     Y+ Y                        K  P D +V G + 
Sbjct: 482 PAKREADTLDTFVCSSWYYLRY--------PDNKNTDAPFDPELINKMLPVDKYVGGPEH 533

Query: 268 LRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
              H +Y             L  + P          +   G K+SKS GN I P + I+E
Sbjct: 534 ACMHLLYARFITKALRDMGYLKFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKE 593

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D  R +L+   A  + G +  DG+K    A   + I   +     +I    +     
Sbjct: 594 FGADVFRMYLMFGFAYVEGGAWSDDGVKSV--ARFVDRIERTLESCRDIINASENIKTTI 651

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKT 439
                + +          ++ + E+ +    + A+A+++   + + +Y  A         
Sbjct: 652 DSEEKDLNFW----RHTAIKGVSEDAEKMQFNTAIARLMEFTNAIHKYIQA------DTK 701

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF------------------VAD 481
           NP           E +     LL  F P    + +++L                   V D
Sbjct: 702 NP-------TFLKETVVDFLKLLAPFAPHFTEEHWNLLGHNSTIFNEKWPEFNPAALVKD 754

Query: 482 ENRCFQSLDQRLKPGFMLHKTFD 504
           E      ++ ++K   M+    D
Sbjct: 755 EVEIAIQVNGKIKAKIMIPSNLD 777


>gi|88801828|ref|ZP_01117356.1| leucyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782486|gb|EAR13663.1| leucyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 1117

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D  G    +
Sbjct: 28  SKKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISD 115
            A   G       + N   +R   D +  S+D    +RT+   ++   + ++ ++ +
Sbjct: 88  YAIQTGQHPAKTTEANIATYRKQLDKIGFSFDWSREVRTSNPEYYKWTQWIFTELFN 144



 Score = 63.6 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 70/178 (39%), Gaps = 33/178 (18%)

Query: 301  EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            EK+SKS  NV++P +++ E G DALR F +      +   +   G+    +      +  
Sbjct: 891  EKMSKSKYNVVNPDDIVAEYGADALRLFEMFLGPLEQAKPWKTSGISGVYS--FLKKLWK 948

Query: 361  LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            L                    +  ++ +  L V  + +++++E++++   + +++  +  
Sbjct: 949  LYFNEAVF-----------EVSKEKATKEELKVLHKTIKKVQEDIESFSFNTSVSTFMIA 997

Query: 421  VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            V+E                     + +      ++  L +LL  + P ++ +++  L 
Sbjct: 998  VNE--------------------LTALKCNKRSILEPLLLLLSPYAPHISEELWRKLG 1035


>gi|312863569|ref|ZP_07723807.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517027|ref|ZP_08069915.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311101105|gb|EFQ59310.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322124395|gb|EFX95895.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 932

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 572 ANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVTSVDTS-ND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +   +         +  ++  +L +     PT  A         D+ +   
Sbjct: 631 VRISMDILSQVSES------YRKIRNTLRFLLANTSDFNPTTDAVAFEDLRSVDQYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++ ++ E+   Y D  K     ++       +  TV
Sbjct: 685 FNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L   +E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFENED 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWDNPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH 201


>gi|189206534|ref|XP_001939601.1| isoleucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975694|gb|EDU42320.1| isoleucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1079

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +    +  Y           +P D    G D     F+ +      L   L
Sbjct: 521 VFDCWFESGSMPYASAHYPFENIEQFEASFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKL 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDG-FYDK 343
           P    V +   +   G+K+SK L N  DP  +++  G DALR +L+       +   + +
Sbjct: 581 PFKNCVVNGIVLAEDGKKMSKRLKNYPDPNLIMKNYGSDALRLYLINSPVVRAETLRFKE 640

Query: 344 DGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAFTE-----SDESILSVCSR 396
            G+K+ V+  L           +  +++ K  D       A  +      D  IL+ C  
Sbjct: 641 TGVKEIVSKVLLPFWNSYQFFDQQATLLKKVADLHFVFDPAAEKTNTNIFDRWILASCQS 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           +L+ +   M    ++  + +++ L+    + Y    +     +   +     L    EV+
Sbjct: 701 LLKFVNAEMAAYRLYTVVPRLLELIDNTTNWYIRFNRRRLKGEYGLEDTKHALNTLFEVL 760

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             L   L  F P + + I+  L
Sbjct: 761 YTLCRGLAPFTPFITDNIYLRL 782



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 19/139 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++         +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  KGKQPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                                    +  V + +  +R   + L   I +D+  +T +   
Sbjct: 90  IDKELGMSGRDAVRELGIATYNEKCRAIVMRYASEWRSTIERLGRWIDFDNDYKTMDTSF 149

Query: 103 HDTCRILWKKISDKGDIYK 121
            ++   ++K++ DKG +Y+
Sbjct: 150 MESEWWVFKRLFDKGAVYR 168


>gi|188532859|ref|YP_001906656.1| isoleucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|254782403|sp|B2VGR6|SYI_ERWT9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188027901|emb|CAO95758.1| Isoleucyl-tRNA synthetase 1 [Erwinia tasmaniensis Et1/99]
          Length = 938

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMALFVHKDTEQLHPDSLELMEKVALRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ +   +                
Sbjct: 501 E-QDGIQAWWDLDARELMGADADNYVKVPDTLDVWFDSGSTSYSVVD----ARPEFGGSA 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
           P DL++ G D     F +    +  +    P  + +     +  +G K+SKSLGN + P 
Sbjct: 556 P-DLYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L +  
Sbjct: 615 DVMNKLGADILRLWVASTDYSGE-IAVSDEILKRSADS------YRRIRNTARFLLANLA 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +        +I  + +    H  + +++   S      Y
Sbjct: 668 GFNPETDKVKPEEMVVVDRWAVGRALAAQNDIVASYEAYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       ++  L   +   +   A++I+  L
Sbjct: 728 LDIIKDRQYTAKADGLARRSCQTALWYIVEALVRWMAPIMSFTADEIWGYL 778



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEQTIGKPGEKVSAAEFRAACRQYAAEQVEGQKADFIRLGVLGDWDRPYLTMDFKTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI   G ++KG     + L   +   + EV  
Sbjct: 166 IRALGKIIGNGHLHKGAKPVHWCLDCRSALAEAEVEY 202


>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|84029567|sp|Q4L5P4|SYI_STAHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 916

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 15/260 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKEMDIMDVWFDSGSSHRGVLENRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + D  +       E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPDTDVIPEAELLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT-NPDRASTVLYVTVEV 454
                E+  N        +V + ++    + Y D  K     +  N  +  ++  V  ++
Sbjct: 689 TASTIEHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIF 474
           +  +  LL   +   A +++
Sbjct: 749 LVDMTKLLAPILVHTAEEVW 768



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   +     Y N   H+GHA   II D++ R+  + G    +  G D HG  I +A
Sbjct: 45  KGNQSYILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   ++D   T +  +     
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALEQIELQKKDFKRLGVRGDFNDPYITLKPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|281426056|ref|ZP_06256969.1| leucine--tRNA ligase [Prevotella oris F0302]
 gi|281399949|gb|EFB30780.1| leucine--tRNA ligase [Prevotella oris F0302]
          Length = 968

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+    H+GH    I +D+ ARF RL G +VL   G D +G    +
Sbjct: 28  KTKKKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARFKRLQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N  ++R+  D +  S+  D  +RT + +++   +  + K+     
Sbjct: 88  YAIQTGQHPAITTETNINHYREQLDKIGFSFDWDREVRTCDPQYYHWTQWAFMKMFGSYF 147

Query: 119 IYKG 122
             + 
Sbjct: 148 CNEC 151



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 97/236 (41%), Gaps = 36/236 (15%)

Query: 260 LHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P ++I+
Sbjct: 699 VNLVKNDILDTEAFKQWRPEYNNAEFILEDGKYICGWAIE---KMSKSMYNVVNPDDIIK 755

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           + G D LR + +          +D +G+         +G    + +  S+  +       
Sbjct: 756 DYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCHRFLKKFWSLFWERGGEEKL 806

Query: 379 TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK 438
                  S E++ S   ++++++ E+++    + +++  +  V+E               
Sbjct: 807 IVDDVEPSKENLKS-VHKLIKKVTEDIEKFSYNTSISAFMIAVNE--------------- 850

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                         E+++++ +LL  F P +A +++ +L       +  + S D++
Sbjct: 851 -----LGQQKCHNRELLQKMVVLLSPFAPHVAEELWHVLGNKGTVCDAAWPSYDEK 901


>gi|312873594|ref|ZP_07733641.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090847|gb|EFQ49244.1| leucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 804

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 7/219 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++  Y      +P+A+  H+GH       D+LAR  R  G +VL   G D  G    + 
Sbjct: 28  NKKNYYALDMFPFPSAKGLHVGHPEGYTATDILARMKRAQGYNVLHPMGWDAFGLPTEQY 87

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  NF++    L  SY  D  + T++  ++   + +++++   G  
Sbjct: 88  AIKTGRDPMDVTKENIANFKNQLTQLGFSYDWDREVNTSDPAYYKWTQWVFEQMYKMGLA 147

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +S        ++EV  G   +       PV       +  +++AY D+LL  
Sbjct: 148 YEAEVPVNWSPDLGTVVANEEVIDGKTERGGF----PVYRRNMRQWMLKMTAYADRLLED 203

Query: 180 YESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
            +         E +   I           +      + +
Sbjct: 204 LDDLDWPESIKEMQRNWIGRSYGAQITFQVENTNLTFDV 242



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 54/346 (15%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYES-----------HPEFILPIERRNEVISFVKSGLKDLS 208
            +   + F    Y  + +                    ILP     +     +S L +L+
Sbjct: 409 YKLRDWDFSRQRYWGEPIPIIHWEDGETTLVPEDQLPLILPHATNIKPSGTPESPLANLT 468

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSKAKFWPADLHVIG 264
                 D   +        M  W  +   YL      +           K+ P +++V G
Sbjct: 469 DWINVVDENGRKGKRETNTMPNWAGSSWYYLRYIDPHNTEKLGEYDLFKKWLPVNMYVGG 528

Query: 265 KDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            +    H +Y   +         +    P  K +++ G IL   EK+SKS GNV++P ++
Sbjct: 529 AEHAVRHLLYARFWHKVLYDLGVVPTKEPFQK-LYNQGLILKDHEKMSKSRGNVVNPDDI 587

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +EE G D+LR + +          +D +G            I   + R   +++ D D  
Sbjct: 588 VEEYGADSLRTYEMFMGPLDASIDWDDNG---------PASIKKFLDRVWRLMVNDLDVK 638

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWE 435
                    E+D  +  V ++ ++++ E+ +    + A++Q++  V+E            
Sbjct: 639 AVVSDKIVEENDGQLDKVYNQTVKKVTEDFEALHFNTAISQMMVFVNEA----------- 687

Query: 436 LKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                  +A+++     E       LL    P +  +I+ IL   +
Sbjct: 688 ------QKATSIPRAYAEGF---VQLLAPVAPHMMEEIWQILGHDE 724


>gi|302191489|ref|ZP_07267743.1| isoleucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806571|ref|ZP_07700571.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167050|gb|EFO69229.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 928

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 108/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  E   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++     ++ +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|309808603|ref|ZP_07702495.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325913434|ref|ZP_08175800.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308168077|gb|EFO70203.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325477203|gb|EGC80349.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 928

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 108/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  E   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++     ++ +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|32266689|ref|NP_860721.1| isoleucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81665720|sp|Q7VGX8|SYI_HELHP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|32262740|gb|AAP77787.1| isoleucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 930

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 101/260 (38%), Gaps = 13/260 (5%)

Query: 225 QYIMYVWIDALTNYLT--TTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           ++I+ VW D+ + +       Y    +   A   PAD+++ G D     F +    +  +
Sbjct: 533 KHILDVWFDSGSTWSAVLENEYKGAGNNYDAGSHPADMYLEGSDQHRGWFQSSLLLSCAI 592

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P  + +         GEK+SKS GNVI P E+I+  G + LR ++        D  
Sbjct: 593 AKRAPYKQILTHGFTFDRNGEKMSKSKGNVISPSEIIKTQGSEILRLWVALSHYQ-SDQN 651

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
              + LK+    +    I N + R +          +         D  ILSVC RV  E
Sbjct: 652 ISDEILKQV--GEQYRKIRNTI-RFLLANASQNSQDMVEKDELDVIDRWILSVCDRVFDE 708

Query: 401 IRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEVIR 456
             E        +A   V+S  ++E+   Y D  K   L   +    R   +    V ++R
Sbjct: 709 AYEYFDEYEFAKAFQVVMSFLINELSGIYLDLCKD-ILYCDDVSSLRRRAIQSALVMILR 767

Query: 457 QLAILLQAFVPKLANKIFDI 476
           ++   +   +   A++ F  
Sbjct: 768 RVLHFIAPVLTYTADEAFRH 787



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +     Y N   HIGHA   I+ D++ ++H   G ++ +T G D HG  I +  + 
Sbjct: 48  KNFCLHDGPPYANGHLHIGHALNKILKDIIVKYHYFKGENIRYTPGWDCHGLPIEQQVEQ 107

Query: 65  AGVTTKV--------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                K                  +  +   D    L +   +++  +T +         
Sbjct: 108 KIGKAKKDNLNKTKLRELCRNHAQKFIQIQSDEFQALGVLGDFENPYKTMDFAFEAQIYR 167

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              ++  +G + +     ++S   E    D EV  
Sbjct: 168 SLIELVKEGLLAERSKPIYWSWACETALADAEVEY 202


>gi|20094800|ref|NP_614647.1| leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|32171571|sp|Q8TVM4|SYL_METKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19888009|gb|AAM02577.1| Leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 943

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 73/444 (16%), Positives = 138/444 (31%), Gaps = 83/444 (18%)

Query: 98  TEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           T+       + +++    KG +    + G              +  G     Y+    PV
Sbjct: 373 TDPELEKATQEVYRAELHKGVMVVDEFEGTPVREAREEIKSRLIESGDADVMYDFSEKPV 432

Query: 158 QWME---------EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                        ++ +F R S  + K  +        I+P E R      ++  L D +
Sbjct: 433 ICRCGTECVVRILKDQWFLRYSDGEWKERAEELLGRMEIVPEEVRANFEDTIE-WLDDWA 491

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLD---------------------- 246
            +R     G  +P DP +I+    D+       T                          
Sbjct: 492 CAR-RVGLGTPLPWDPDWIVEPLSDSTVYMAYYTIAHRLKGKGELPPEVFDYVFLGEGDP 550

Query: 247 ---------------NPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--LSANLPLPKK 289
                                  ++P +  +  KD++  H  ++      L      PK 
Sbjct: 551 EEIAEKAGLDVEELEAMREEFEYWYPLNWRLSAKDLVTNHLTFFIFHHAALFPEDKWPKG 610

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +   G  L +G+K+S S GNV+   E ++E G D +R FL       +D  +D       
Sbjct: 611 IVVFGMGLLEGQKMSSSKGNVVLLSEALDEYGPDVVRLFLATSAEPWQD--FDWRD---- 664

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
              +   G+   + R  ++I    D  +    A    D   L     V++E  E ++   
Sbjct: 665 ---EYVRGVQRHLERFETLIRDHADESVEDKDAV---DRWFLHEFREVVEETTEALEGFQ 718

Query: 410 IHRALAQ----VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAF 465
           I RA  +    V+ L+ E   Y              +     + +  E+      LL   
Sbjct: 719 IRRAYNRAFYGVMKLLRE---Y--------------EAMKGHVKILGEIAEDWLKLLHPV 761

Query: 466 VPKLANKIFDILFVADENRCFQSL 489
           +P   ++++  +   D     +  
Sbjct: 762 IPFATDRLWREVLGEDSFLLEEEW 785



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 26/170 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +RE +YI+ A  YP+   H+GHA   ++ D+ ARF R+ G +VLF       G  +   A
Sbjct: 25  DRESVYITVAYPYPSGSMHVGHARTYLVPDIYARFKRMQGYNVLFPMAFHVTGTPVVGIA 84

Query: 63  Q------------------------NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIR 96
           +                              +  V+  +R + +    +  S D      
Sbjct: 85  ERIKEGDEDTIRLYRDLYGVPEEELEKFTEPEAIVEYFAREYEENMKRMGYSIDWRRKFT 144

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           T +  +       + ++ +KG + KG +   Y    E    D ++ +G D
Sbjct: 145 TVDPEYRSFITWQYLRLREKGLVDKGEHPVRYCPHCENPVGDHDLLEGED 194


>gi|320094120|ref|ZP_08025933.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978922|gb|EFW10452.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 909

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 10/255 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           IM  W  +  +     G+L + D   A+ +P DL   G+DI+     +    A L    L
Sbjct: 544 IMDTWATSSLSPQLACGWLHDDD-LFARTYPMDLRPQGQDIIRTWLFSTVVRADLEFGAL 602

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  +D+ 
Sbjct: 603 PWRHAGLSGWILDADHKKMSKSKGNVVTPMGLLEKYGSDAVRYW-AASARLGLDAAFDEQ 661

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K  +   LA  + N    +++M  +     +       + D S+L+  + V+ E  + 
Sbjct: 662 QMK--IGRRLAIKVLNASKFALTMGGEGAQLDLDPALVTVDLDRSVLAELAGVVAEATDA 719

Query: 405 MQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAI 460
           +      RAL    S      D Y +  K     +    +   A++       VI  +  
Sbjct: 720 LAAYDHARALEVTESFFWTFCDDYLELVKERAYNREGAWDGASAASARAALALVIDTVVR 779

Query: 461 LLQAFVPKLANKIFD 475
           LL  ++P +  +++ 
Sbjct: 780 LLAPYLPFVTEEVWS 794



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y I T     +   HIGH +     DV+ARF R+ G  V +  G D++G    +  
Sbjct: 48  REQVYSIDTPPPTVSGSLHIGHVFSYTHTDVVARFQRMRGRAVFYPMGWDDNGLPTERRV 107

Query: 63  QN 64
           QN
Sbjct: 108 QN 109


>gi|299142473|ref|ZP_07035605.1| leucine--tRNA ligase [Prevotella oris C735]
 gi|298576195|gb|EFI48069.1| leucine--tRNA ligase [Prevotella oris C735]
          Length = 968

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K ++K Y+     YP+    H+GH    I +D+ ARF RL G +VL   G D +G    +
Sbjct: 28  KTKKKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARFKRLQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N  ++R+  D +  S+  D  +RT + +++   +  + K+     
Sbjct: 88  YAIQTGQHPAITTETNINHYREQLDKIGFSFDWDREVRTCDPQYYHWTQWAFMKMFGSYF 147

Query: 119 IYKG 122
             + 
Sbjct: 148 CNEC 151



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 82/194 (42%), Gaps = 32/194 (16%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P ++I++ G D LR + +          +D +G+         +G   
Sbjct: 738 EKMSKSMYNVVNPDDIIKDYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCHR 788

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +  S+  +              S E++ S   ++++++ E+++    + +++  +  
Sbjct: 789 FLKKFWSLFWERGGEEKLIVDDVEPSKENLKS-VHKLIKKVTEDIEKFSYNTSISAFMIA 847

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E                             E+++++ +LL  F P +A +++ +L   
Sbjct: 848 VNE--------------------LGQQKCHNRELLQKMVVLLSPFAPHVAEELWHVLGNK 887

Query: 481 DE--NRCFQSLDQR 492
               +  + S D++
Sbjct: 888 GTVCDAAWPSYDEK 901


>gi|224283898|ref|ZP_03647220.1| isoleucyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 1108

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 18/298 (6%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++  +  + +L+        G         ++  W ++ +       Y         + 
Sbjct: 546 NVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQH 605

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD  V  IG+    F+ ++  A  L  + P  K V  HG +L   G+K+SK L N  D
Sbjct: 606 FPADYIVEYIGQTRGWFYLLHVMATALF-DRPAFKNVICHGIVLGSDGQKMSKHLRNYPD 664

Query: 313 PIEVIEEVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +     +G++  V   +     +    ++     
Sbjct: 665 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAA 724

Query: 372 D----YDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           +    +D             E D  +L+   R+++ + +++    I  A       +   
Sbjct: 725 NGGAGFDARQLHADEVAGLPEMDRYLLARTRRLVERVEKSLDEFAISDACDAASDFIDVL 784

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y    +     K +             V+     +L    P  +  ++  L   +
Sbjct: 785 TNWYIRNTRD-RFWKEDT----NAFNTLYTVLEVFMRVLAPLAPMESESVWRGLTGGE 837



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 69  PPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVD 128

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +        A  +D  ++   +T    + ++    +K
Sbjct: 129 QIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVD--FEHGYKTLNIPYMESVMWAFK 186

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +KG  Y+G     Y  +D+   +  E+   AD
Sbjct: 187 QLYEKGLAYQGYRVLPYCPKDQTPLSAHELRMDAD 221


>gi|255071133|ref|XP_002507648.1| predicted protein [Micromonas sp. RCC299]
 gi|226522923|gb|ACO68906.1| predicted protein [Micromonas sp. RCC299]
          Length = 1187

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 66/444 (14%), Positives = 138/444 (31%), Gaps = 34/444 (7%)

Query: 68  TTKVFVDQNSRNFRDMADVLDIS-----YDDFIRTTEKRHHDTCRILWKKISDKGDI--- 119
             K          ++M  ++D S     Y    R+     +      + K+ D       
Sbjct: 410 HVKEADKDLIAAIKNMGRLVDNSRIVHSYPYCWRSHTPLIYKAVASYFVKVEDIKTRLLE 469

Query: 120 -YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             K        ++++ ++N  E               P+     E               
Sbjct: 470 NNKKTRWVPPHVQEKRFHNWLENAHDWAISRNRYWGTPIPVWCSE------------DGE 517

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
                           +VI  +     D      +    +      + +   W ++    
Sbjct: 518 EIRVFGSIAELESATGKVIDDIHRHFIDHLEVPSSRGPNVPPLKRVEDVFDCWFESGAMP 577

Query: 239 LTTTGYLD-NPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGF 295
                Y   N D  + K +PA+    G D     F+ +   +  L         V +   
Sbjct: 578 YAQQHYPFENKDYFERKIFPANFVAEGLDQTRGWFYTLMVLSTALFDRPAFQNLVCNGLV 637

Query: 296 ILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGL------KK 348
           +   G+K+SKSL N  DP E++ + G DALR +L+       +   + ++G+        
Sbjct: 638 LASDGKKMSKSLKNYPDPNEILNKYGADALRLYLINSPVVRAEPLRFKEEGVFAVLKDVF 697

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQ 408
               +    +   V R  S     ++            D  I S  + ++  ++  M N 
Sbjct: 698 LPWYNAYRFLVQNVRRIESETHMSFNPFASDQNGINVLDRWIASATTSLVTFVKNEMDNY 757

Query: 409 LIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
            ++  +  +++ + ++ + Y    +     K   D     L     V+  L  ++  F P
Sbjct: 758 RLYTVVPHLVTFIGQLTNIYVRYNRSRIKGKNGVDDTRRALTALYNVLLTLCKMMAPFTP 817

Query: 468 KLANKIFDILF--VADENRCFQSL 489
             A K++  L   + +E +   S+
Sbjct: 818 FFAEKMYQNLRRCLPEEGKSEPSV 841



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           + R +        +    PH GH     I DV+ RF    G  V    G D HG  +  +
Sbjct: 64  EGRPEYVFYDGPPFATGLPHYGHILAGTIKDVVTRFACSTGYHVTRRFGWDCHGLPVEYE 123

Query: 61  AAQNAGVTTKV-----FVDQNSRNFRDMADVLD-------------ISYDDFIRTTEKRH 102
             +  G+  K       + + +   RD+                  I +++  +T ++  
Sbjct: 124 IDKKLGIKGKEDVLRLGIGKYNEECRDIVMRYSKEWEKTVLRTGRWIDFENDYKTLDRNF 183

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K + +K  +YKG     YS       ++ E
Sbjct: 184 MESVWWVFKTLWEKNLVYKGFKVMPYSTACNTPLSNFE 221


>gi|315639610|ref|ZP_07894750.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484571|gb|EFU75027.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 930

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 30/271 (11%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PAD+++ G D     F++    + 
Sbjct: 516 FTKETDIMDVWFDSGSSHEAVLR------QREDLSFPADMYLEGSDQYRGWFNSSITTSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D
Sbjct: 570 AINGVAPYKAVLSQGFTLDGEGRKMSKSLGNTILPEKVINQMGADILRLWV-SSVDYESD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +       + +   +  ++  +L + +   P             D+ +   
Sbjct: 629 VRVSMDILSQ------VSEVYRKIRNTMRFLLANTEDFNPETDSVAYEDLRSVDKYMTVR 682

Query: 394 CSRVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL--KKTNPDR--AST 446
            ++V++EIRE   ++         VI+   V     Y D  K       K N DR    T
Sbjct: 683 LNKVVKEIREKGYESYNFLHIYRTVINFLTVDLSSFYLDFAKDVVYIEAKENHDRRCMQT 742

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           V Y T      L  LL   +P  A +I+  L
Sbjct: 743 VFYQTAV---TLTKLLTPIIPHTAEEIWSHL 770



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
             N G+  K             +        R+    L +S D      T    +     
Sbjct: 105 LTNKGIKRKEMSLAEYRQKCYDYALTQVDKQRNDFKRLGVSGDWNHPYVTLTPDYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEY 200


>gi|309805561|ref|ZP_07699606.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165212|gb|EFO67450.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 928

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 107/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  E   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++      + +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTDMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|255013125|ref|ZP_05285251.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 946

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH    I +D+ +RF RL G +VL   G D +G    +
Sbjct: 28  TNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++    N   +R+  + +   YD    IRT +  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPEITTKNNIARYREQLEKIGFCYDWSREIRTCDPEYYKWTQWAFIRMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 101/246 (41%), Gaps = 39/246 (15%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDLLDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E+           L
Sbjct: 785 QVTDAEPT-ADE--LKSLHKLIKKVTFDIEHFSYNTSISAFMICVNELT---------SL 832

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRL 493
           K +              ++  L  LL  F P +  +++  L       + R  +  ++ L
Sbjct: 833 KCSKRA-----------ILEPLITLLAPFAPHIVEELWHQLGHDTTICDARWPKHNEEYL 881

Query: 494 KPGFML 499
           K   ++
Sbjct: 882 KEKSVV 887


>gi|227891035|ref|ZP_04008840.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867124|gb|EEJ74545.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 948

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 135/421 (32%), Gaps = 31/421 (7%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + M       +D   RT +          +  +    D   G  +      D   +    
Sbjct: 405 KQMDYEHSYPFDW--RTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFPD---WGQKR 459

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +Y     +          W      F+             E   + +             
Sbjct: 460 LYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEAIMTKETIEHVAKLVEEHGSNIWFQREA 519

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K  L +   S  + +       D   IM VW D+ +++                 +PADL
Sbjct: 520 KDLLPEGFTSEHSPNGKFTKETD---IMDVWFDSGSSHQGVCAER------DYLTYPADL 570

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++ G D     F++    +   S + P  + +     +  KG K+SKSLGN I P EVI+
Sbjct: 571 YLEGSDQYRGWFNSSLITSVAYSGHAPYKQILSQGFTLDGKGRKMSKSLGNTIVPSEVID 630

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           ++G + +R +++       D        ++   +            +V  +L +     P
Sbjct: 631 KMGAEIIRLWVLSVDTSA-DVRVSMGSFQQIAES------YRKFRNTVRFLLANTTDFDP 683

Query: 379 TP-----GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                        D+ +  + ++  +EI +   N        ++I+ +       Y D  
Sbjct: 684 AKNAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 743

Query: 432 KPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K     +  +  +  ++  V  +V+ +L  L+   +P    +I+  L   +E      + 
Sbjct: 744 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYLKEDEEYAQLSEMP 803

Query: 491 Q 491
           +
Sbjct: 804 E 804



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R   + G    +  G D HG  I + 
Sbjct: 62  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQ 121

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AGV  K             +  +     R     L +   +D+   T +  +     
Sbjct: 122 LKKAGVDRKALSVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQI 181

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K+++KG IYKG    ++S   E+   + EV   
Sbjct: 182 RVFGKMAEKGLIYKGKKPVFWSWSSESALAEAEVEYH 218


>gi|226939543|ref|YP_002794616.1| Syi [Laribacter hongkongensis HLHK9]
 gi|259511507|sp|C1DCX2|SYI_LARHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226714469|gb|ACO73607.1| Syi [Laribacter hongkongensis HLHK9]
          Length = 957

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 98/278 (35%), Gaps = 22/278 (7%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T +            ++   +PADL++ G D     FH+       L    P
Sbjct: 563 LDVWFDSGTTHFHVLR----GTHAEQLAYPADLYLEGSDQHRGWFHSSLLTGCALDGRAP 618

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GNVI P ++ + +G D LR ++      G+        
Sbjct: 619 YNQLLTHGFVVDGQGRKMSKSVGNVIAPQKINDSLGADILRLWVASTDYSGE-LAISDTI 677

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQE 400
           LK   ++         +  ++  +L +     P   A      TE D   L +  R+   
Sbjct: 678 LKGTTDS------YRRLRNTIRFLLANLSDFNPATDALPVSELTELDRYALVLAQRLHAG 731

Query: 401 IREN-MQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIR 456
           + E+       H A+  ++          + D  K      K +     +       V R
Sbjct: 732 VAEDCYPRYAFHTAMQAIVGYCTDDLGAFWLDIIKDRLYTTKADSKARRSAQTALWHVTR 791

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            L  LL   +   A++ +  L    E+         L 
Sbjct: 792 SLLSLLAPVLCFTADEAWQALTGEAEDSPVYHTWHELP 829



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I    
Sbjct: 46  GRPKFILHDGPPYANGDIHIGHAVNKILKDIIVRSKTQAGFDAPYVPGWDCHGLPIEHQI 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMAD 85
           +      K  ++        + +
Sbjct: 106 EKLVKGDKKAIEAAPSIHARITE 128


>gi|86356478|ref|YP_468370.1| isoleucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86280580|gb|ABC89643.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 968

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/327 (19%), Positives = 119/327 (36%), Gaps = 23/327 (7%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              +    R  A+   +  + + H E +        +++   +   D   +    +  + 
Sbjct: 498 QRPDWVLSRQRAWGVPICVFVDEHGEVLKDDAVNQRILNAFDAEGADAWFAEGAKERFLG 557

Query: 220 IPDDP------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              DP        I+ VW D+ + +  T              WPADL++ G D     FH
Sbjct: 558 NEHDPAKWTQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFH 611

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +       P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++ 
Sbjct: 612 SSLLESAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMT 671

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D    K  ++   N D    + N +   +  +  D    I       E ++ +L
Sbjct: 672 SDYA-DDLRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEEI-ALADLPELEQLML 727

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTV 447
              + + Q +REN       +    +I   + E+   YFD +K   L    P   R    
Sbjct: 728 HRLAELDQLVRENYDAFDFKKIARALIDFANVELSAFYFDVRKD-ALYCDAPSSLRRRAS 786

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
           L+V  ++   +   L   +P    + +
Sbjct: 787 LHVIRQIFDCMVTWLAPMLPFTTEEAW 813



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 11/105 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKI 112

Query: 63  QNAGV-----------TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +                    ++            + +  D+F R
Sbjct: 113 EEENYRAKGKAKPDLKEPAAMIEFRRECRAYAEKWIKVQGDEFQR 157


>gi|322371471|ref|ZP_08046020.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549003|gb|EFW90668.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 948

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 137/424 (32%), Gaps = 65/424 (15%)

Query: 98  TEKRHHDTCRILWKK------ISDKGDIYKGCYSGWYSLRDEAYYNDD---EVYKGADGQ 148
           ++    D  + ++ +      +    D Y G          +A + +    +       +
Sbjct: 377 SDPALEDATQEVYNREFHSGKLRGMYDDYAGEIVEDVRDDLKAEFQEQGSFDTMHEFSEE 436

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   V+  E++ +F R +    K  ++        +P   R E        L +  
Sbjct: 437 VVCRCGGAVEVAEQDTWFLRYNDEAWKAKAHEVVAELDAIPENTR-EQYDHTIDWLNEWP 495

Query: 209 LSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP-------------------- 248
             R  +  G ++P D ++++    D+       T                          
Sbjct: 496 CIR-NYGLGTRLPWDDEFVIEPLSDSTIYMSYYTIAHRISDVPVEELDKEFFDTLFYGSE 554

Query: 249 ------------DGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLP--LPKKVFSHG 294
                             ++P D      D++  H  ++         P   P+ +   G
Sbjct: 555 AVDDPNETALALREEWDYWYPVDYRCSANDLVSNHLTFFLFHHAELFDPANWPQGITVMG 614

Query: 295 FILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADL 354
             L +GEK+S S G+V+ P   IE+ G D +R+FL+      +D  +  + ++   N   
Sbjct: 615 MGLLEGEKMSSSKGHVVLPENAIEKYGADTVRFFLMNSAEPWQDYDWRSEQVESTGN--- 671

Query: 355 ANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRAL 414
              +    +R+  +I                 D  +LS     ++E+ + M       A 
Sbjct: 672 --QLRRFWNRANEIISAPEGER-----DLQRIDRWLLSKLQGTVREVTDAMDRFETRTAS 724

Query: 415 AQVISLVSEVDRY-FDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
                       Y F+    W  K+T+ DR+    +    V+     LL  F+P +A ++
Sbjct: 725 QDAF--------YGFEEHLKWYRKRTDTDRSGA-RWTLRTVLNARLRLLAPFIPFMATEL 775

Query: 474 FDIL 477
            + L
Sbjct: 776 HERL 779



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 27/154 (17%)

Query: 20  PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN--------------- 64
            HIGHA    + DV AR+ RL G +VLF       G  I  A +                
Sbjct: 1   MHIGHARTYTVPDVWARYRRLQGDNVLFPIAWHVTGTPIVGAVERLKKREPEQMSVLQDT 60

Query: 65  ---------AGVTTKVFVDQNSRN-FRDMADVLDISYD--DFIRTTEKRHHDTCRILWKK 112
                       T   F      + ++     L +S D      T ++R+       ++ 
Sbjct: 61  YNVSDEDLSEMETPMGFARHFIEDSYKKNMQSLGLSIDWRREFTTNDERYSKFITWQYET 120

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           + ++G + KG +   Y   +       ++ +G +
Sbjct: 121 LKERGLLEKGLHPVKYCTNEGNPVTTHDLLEGEE 154


>gi|224824629|ref|ZP_03697736.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603122|gb|EEG09298.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 927

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 101/278 (36%), Gaps = 24/278 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ + +                 WPADL++ G D     F +            P
Sbjct: 533 LDVWFDSGSTHFAVLKQRP------ELAWPADLYLEGSDQHRGWFQSSLLTGCATIGRAP 586

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  KG K+SKS GNV+ P +V + +G D LR ++      G+      + 
Sbjct: 587 YQQLLTHGFVVDGKGLKMSKSKGNVVAPQKVNDSLGADILRLWVASTDYSGE-LAISDEI 645

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCSRVLQE 400
           LK+   +         +  ++  +L +     P   A       E D+  + +   + ++
Sbjct: 646 LKRVTES------YRRLRNTLRFLLANLSDFDPLDNAVPFSDLLEIDQYAILMAKELQEK 699

Query: 401 IR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIR 456
           +  E       H A+ +++   SE     Y D  K          RA  +       + R
Sbjct: 700 VTGELYTRYAFHHAVQEIVGYCSEDLGAFYLDVLKDRLYTTQADSRARRSAQTALYHITR 759

Query: 457 QLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            L +L+   +   A++ +++L  ++E      L     
Sbjct: 760 SLLLLIAPILCFTADEAWEVLTKSEEESTLFHLWHEFP 797



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 12/153 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   ++ D++ R   L G D  +  G D HG  I    
Sbjct: 48  GRPKFILHDGPPYANGDIHIGHAVNKVLKDIIVRSKTLAGFDAPYVPGWDCHGLPIELMV 107

Query: 63  QNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
           +                + +  +     +     L +   +D+   T + +         
Sbjct: 108 EKLHGKNIPAAKFRELCREYAHEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADIVRTL 167

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            KI + G ++KG     + +   +   + EV  
Sbjct: 168 GKIYENGYLFKGEKPVHWCIECGSALAEAEVEY 200


>gi|15604530|ref|NP_221048.1| valyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226199|sp|Q9ZCN6|SYV_RICPR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3861224|emb|CAA15124.1| VALYL-TRNA SYNTHETASE (valS) [Rickettsia prowazekii]
 gi|292572319|gb|ADE30234.1| Valyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 814

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 116/339 (34%), Gaps = 22/339 (6%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-FDWG 217
            M  E +   LS         Y   P  I   +R  E    + + +  L +        G
Sbjct: 384 KMRLENWINSLSWDWCISRQRYFGVPFPIWYSKRIGEEGKILYADISQLPVDPLKDLPIG 443

Query: 218 I-KIPDDPQ-YIMYVWIDALTNYLTTTGYLD----NPDGSKAKFWPADLHVIGKDILRFH 271
             K   DP   +M  W  +  +   +T  +            K +P DL     +I+R  
Sbjct: 444 YSKEEVDPDLDVMDTWATSSVSPQLSTYGISEDLAINKVRHDKLFPMDLRPQAHEIIRTW 503

Query: 272 AIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           A Y    + L    LP    + S   +     K+SKS GNV+ P +++E  G D +RY+ 
Sbjct: 504 AFYTILKSHLHQNILPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLERYGADVIRYWS 563

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAF 383
                 G D  Y +D    +    L N + N           ++   K            
Sbjct: 564 ANSK-LGADTAYSED--VMKNGKRLVNKLWNAAKFVSIHFDKLTSEDKKVSLFDIKEKIT 620

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL--KKT 439
            E D+ +++    +++     +QN     A+            D Y +  K         
Sbjct: 621 NEFDQWMINKLVALVKLATNALQNYEYANAIYLTEKFFWSIFCDNYLEISKTRSYDEANK 680

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           NP    + +     +++ L  L   F+P +  +++ IL+
Sbjct: 681 NPQGQYSSILTLYHIMQTLLKLFAPFMPHITEELYQILY 719



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 15/148 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  ISKAEIYIVDTPPPTVSGQLHIGHIYSYTQTDFIVRFQRMIGKNIFYPIGFDDNGLPTER 92

Query: 61  AAQNAGVTTK-------------VFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                      V      FR +   + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNMERDEFIKICLEVVKNEEAKFRSLFKQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDE 133
            ++ +  +  KG++Y+      +   D 
Sbjct: 153 SQMSFLDLLHKGEVYRANQPILWDTVDG 180


>gi|150009595|ref|YP_001304338.1| leucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166231625|sp|A6LGA2|SYL_PARD8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149938019|gb|ABR44716.1| leucyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 946

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K Y+     YP+    H+GH    I +D+ +RF RL G +VL   G D +G    +
Sbjct: 28  TNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYSRFKRLQGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++    N   +R+  + +   YD    IRT +  ++   +  + ++ +   
Sbjct: 88  YAIQTGQHPEITTKNNIARYREQLEKIGFCYDWSREIRTCDPEYYKWTQWAFIRMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 102/246 (41%), Gaps = 39/246 (15%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 677 VDVNIVSNDLLDIEAFKNWRPEYNDAEFVLEDGKYICGWAVE---KMSKSMFNVVNPDMI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +   +   + D +
Sbjct: 734 VEKYGADTLRLYEMFLGPLEQSKPWDTNGI---------DGVHRFLKKLWGLFFGNTDTL 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    T +DE  L    ++++++  ++++   + +++  +  V+E+           L
Sbjct: 785 QVTDAEPT-ADE--LKSLHKLIKKVTFDIEHFSYNTSISAFMICVNELT---------SL 832

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD---ENRCFQSLDQRL 493
           K +              ++  L  LL  F P +A +++  L       + R  +  ++ L
Sbjct: 833 KCSKRA-----------ILEPLITLLAPFAPHIAEELWHQLGHDTTICDARWPKHNEEYL 881

Query: 494 KPGFML 499
           K   ++
Sbjct: 882 KEKSVV 887


>gi|148643232|ref|YP_001273745.1| leucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222445463|ref|ZP_03607978.1| hypothetical protein METSMIALI_01102 [Methanobrevibacter smithii
           DSM 2375]
 gi|148552249|gb|ABQ87377.1| leucyl-tRNA synthetase, LeuS [Methanobrevibacter smithii ATCC
           35061]
 gi|222435028|gb|EEE42193.1| hypothetical protein METSMIALI_01102 [Methanobrevibacter smithii
           DSM 2375]
          Length = 951

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 80/446 (17%), Positives = 147/446 (32%), Gaps = 60/446 (13%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGA---------DG 147
           + + HD    L+K    KG I +    Y G         +  D + K             
Sbjct: 371 DPKLHDATNELYKVEHRKGIISEHIPEYGGKKVAIAREEFKADMIDKNMATTMYDFAERP 430

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V  + +  +F + S  +    ++   + E I+P E +N    +    L D 
Sbjct: 431 VICRCGEDCVVKIMDNQWFLKYSDEEWTAKTHEVLNGETIIPKEVKNN-FEYYIDWLDDW 489

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALT--NYLTTTGYLDNP----------------- 248
           + SR     G ++P D Q+++    D+    +Y T   YL N                  
Sbjct: 490 ACSR-NVGLGTRLPWDNQWLIEPLTDSTIYMSYYTIAKYLRNMNADDLNPAFFDKVLLDI 548

Query: 249 ---------------DGSKAKFWPADLHVIGKDILRFHAIYWPAFL--LSANLPLPKKVF 291
                                ++P D  +  KD++  H  +       +      P+   
Sbjct: 549 DSDDVKVDDETVKEIQDEFNYWYPLDWRLSAKDLVGNHLSFLMFHHSAIYPKEKWPRGTV 608

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
             G  L +G K+S S GNVI   + IE+   D +R FL+      +D  + +  +     
Sbjct: 609 VFGMGLLEGNKMSSSKGNVILLKDAIEQYSADVVRLFLMASAEPWQDFDWREKEVLGTKR 668

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLI 410
                      ++   +     D             D  +LS  ++ ++E  E +     
Sbjct: 669 R--LEWFREFAAKVEEVKNSPLDLTNIEKVELNRTIDIWMLSQLNQHIKEATEALDGFQT 726

Query: 411 HRALAQ-VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +AL + +  L  +VD Y    K   L   +P     ++YV   V+     LL  F P  
Sbjct: 727 RKALQESLFLLKKDVDHYLYRVKH-LLDSQDP----AIIYVLSTVLEAWIRLLAPFTPHT 781

Query: 470 ANKIFDILFVAD--ENRCFQSLDQRL 493
             ++++            +   D+ L
Sbjct: 782 CEELWETYGGEGYVSQASWPEADESL 807



 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 65/170 (38%), Gaps = 30/170 (17%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           ++EKL+++ A  YP+   HIGH     + DV ARF R++G +VLF       G  +    
Sbjct: 25  DKEKLFLTVAFPYPSGAMHIGHGRTYTVPDVYARFKRMEGYNVLFPMAWHVTGAPVIGIA 84

Query: 59  AKAAQNAGVT----------TKV--------------FVDQNSRNFRDMADVLDISYDDF 94
            +  +    T           K               F  + +    DM     I +   
Sbjct: 85  ERVRRKDPWTLDLYENVHKVPKEELPNLADPEYIVRYFSSEYNEVMHDMGYS--IDWRRE 142

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            RT +  +         K+ DKG I KG +   Y  RD+    D ++ +G
Sbjct: 143 FRTIDPTYKKFVEWQISKLKDKGLIIKGEHPVKYCPRDKNPVGDHDLLEG 192


>gi|67921387|ref|ZP_00514905.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67856499|gb|EAM51740.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 940

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 93/266 (34%), Gaps = 26/266 (9%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ ++      +       +   +P D+++ G D     F +    +  ++   P
Sbjct: 521 MDVWFDSGSS------WASVAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAP 574

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREIACG 336
               +     +  KG K+SKSLGN++DP  +             G D +R ++   +   
Sbjct: 575 YKTVLTHGFVLDEKGYKMSKSLGNIVDPNVIINGGNNHKQEPPYGADLVRLWV-SSVDYS 633

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVC 394
            D    K  LK+    D+   I N   R +   L D+D    T       E D  +L   
Sbjct: 634 SDIRIGKTILKQLF--DIYRKIRNTA-RFLLGNLHDFDPKQHTVSYEELPELDRYMLHRI 690

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPDRASTVLYVT 451
           + V  E+ +        R    V +   V   + Y D  K           R  +   V 
Sbjct: 691 TEVFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISHLESIRRRSCQTVL 750

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              I  LA  +   +  +A  I+  L
Sbjct: 751 AVAIENLAKAIAPVLCHMAEDIWQFL 776



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 52/153 (33%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +     Y N   H+GHA    + D++ ++  + G  V +  G D HG  I      + 
Sbjct: 34  FVLHDGPPYANGSLHMGHALNKTLKDIINKYKLMRGHKVRYVPGWDCHGLPIELKVLQSM 93

Query: 67  VTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
            + +               F  +  +          +  +++    T    +      ++
Sbjct: 94  KSKERQGLTPLKLRRKASDFALKTQQEQAKAFKRFGVWGNWEHPYLTLTPEYEAAQIGVF 153

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +++ KG IY+G     +S   +    + E+  
Sbjct: 154 GEMALKGYIYRGLKPVHWSPSSQTALAEAELEY 186


>gi|254293350|ref|YP_003059373.1| isoleucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041881|gb|ACT58676.1| isoleucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 989

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 92/257 (35%), Gaps = 23/257 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ T +  T          +   WPADL++ G D     F +    +       
Sbjct: 589 ILDVWFDSGTTHAFTLE-------KRGLKWPADLYLEGSDQHRGWFQSSLLESCATRGRA 641

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   G K+SKSLGN I+P EV ++ G + +R ++        D  + KD
Sbjct: 642 PYEGVLTHGFVVAQDGRKMSKSLGNGIEPDEVCKQFGAEIMRIWVGSTDY-TDDPAFGKD 700

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +    N D    + N +   +  +    D            ++ +L   + V  ++R  
Sbjct: 701 IIAA--NVDSYRKLRNTMRYLLGALHGFDDSERVAVQDMPSLEQWMLHRLTEVDAKVRAA 758

Query: 405 MQNQLIHRALAQVISLVSEVDR-----YFDAQKPWELKKTNPD--RASTVLYVTVEVIRQ 457
            +      A  ++       +      YFD +K   L    PD  R  +   V  E+ + 
Sbjct: 759 FEAYDFQAAFKELQVF---TNNDVSAVYFDIRKD-SLYCDAPDDIRRRSCRTVMDELFKC 814

Query: 458 LAILLQAFVPKLANKIF 474
           L       +     + +
Sbjct: 815 LTAWFAPVMVFTCEEAW 831



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +  I     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I   
Sbjct: 55  KGRPEFMIHDGPPYANGHLHIGHAMNKILKDLVVRTKQMSGFDADYIPGWDCHGLPIEWK 114

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHH 103
            +                      + +  +     R+    L +  ++DD   T +    
Sbjct: 115 VEEQFRQKGKAKRDVDPSEFRKACREYATEWVGIQREEFKRLGVVGNWDDPYLTMDYASE 174

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            T    + K+   G + +G     +S  ++    + EV              P+
Sbjct: 175 ATIVEEFLKVGMSGQMRRGSKPVMWSPVEQTALAEAEVEYEDRKANVIWVKFPI 228


>gi|313141050|ref|ZP_07803243.1| isoleucyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133560|gb|EFR51177.1| isoleucyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 1107

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 18/298 (6%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++  +  + +L+        G         ++  W ++ +       Y         + 
Sbjct: 545 NVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQH 604

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD  V  IG+    F+ ++  A  L  + P  K V  HG +L   G+K+SK L N  D
Sbjct: 605 FPADYIVEYIGQTRGWFYLLHVMATALF-DRPAFKNVICHGIVLGSDGQKMSKHLRNYPD 663

Query: 313 PIEVIEEVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +     +G++  V   +     +    ++     
Sbjct: 664 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAA 723

Query: 372 D----YDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           +    +D             E D  +L+   R+++ + +++    I  A       +   
Sbjct: 724 NGGAGFDARQLHADEVAGLPEMDRYLLARTRRLVERVEKSLDEFAISDACDAASDFIDVL 783

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y    +     K +             V+     +L    P  +  ++  L   +
Sbjct: 784 TNWYIRNTRD-RFWKEDT----NAFNTLYTVLEVFMRVLAPLAPMESESVWRGLTGGE 836



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 68  PPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVD 127

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +        A  +D  ++   +T    + ++    +K
Sbjct: 128 QIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVD--FEHGYKTLNIPYMESVMWAFK 185

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +KG  Y+G     Y  +D+   +  E+   AD
Sbjct: 186 QLYEKGLAYQGYRVLPYCPKDQTPLSAHELRMDAD 220


>gi|308274791|emb|CBX31390.1| Isoleucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 942

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 112/348 (32%), Gaps = 20/348 (5%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
             E   G      +   +  +        F         ++   +   F L  E   ++ 
Sbjct: 444 GRERIYGMIENRPDWCVSRQRAWGVPIAVFFCEKCDTLHINQKLADHLFELFKEHGADIW 503

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
              ++       S  +   G         I+ VW D+  ++                 WP
Sbjct: 504 FEKEAAELVPEGSICS-KCGSNTFRKETDILDVWFDSGVSHAAVLEQRPY------LKWP 556

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     FH+    A       P    +     +   G+K+SKSLGNVI P +
Sbjct: 557 ADLYLEGSDQHRGWFHSSLLTAVGTRGKAPYKSVLTHGFVVDADGKKMSKSLGNVIAPKK 616

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           VI++ G + LR ++        D     + LK+   +D    I N   R +   L D+D 
Sbjct: 617 VIDKYGAEILRLWVSASDY-RDDIRISDNILKQL--SDAYRRIRNTC-RFMLGNLYDFDP 672

Query: 376 MIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
                      E D   L   S + ++          H     + +         Y D  
Sbjct: 673 AKDKVSYDLMPEIDRYALFRLSELTEKTARAYDLYEFHTIYHSLYNYCTTDLSAFYLDIL 732

Query: 432 KPWELKKTNPD--RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K   L  + P+     +   V   ++  +  ++   +P  +  I+  +
Sbjct: 733 KD-RLYTSFPESLERRSAQTVMYLILDSITRIMAPILPFTSEDIWKAM 779



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+RE   +     Y N   HIG A   I+ D++ R  ++   + ++  G D HG  I   
Sbjct: 45  KDRELFILHDGPPYANGNIHIGTALNKILKDIIVRSRQMANFNAVYVPGWDCHGLPIEHN 104

Query: 62  AQNAGVT-------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                 +              + + ++     R+    L +   +D+   T    +    
Sbjct: 105 VDKELGSEAKKYSQSRIRKLCRQYAEKYVNIQREEFKRLGVLAEWDNPYLTMAYEYEAII 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                K   +G +++      +    +    + E+    +
Sbjct: 165 ARECIKFGLEGSLFRSKKPIHWCCSCKTALAEAEIEYEDE 204


>gi|255945353|ref|XP_002563444.1| Pc20g09480 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588179|emb|CAP86277.1| Pc20g09480 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1058

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 133/446 (29%), Gaps = 77/446 (17%)

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW-- 159
             D    + + + +KG   K  ++     R     ++D +      Q++    + VQ   
Sbjct: 429 RFDARYKVIEDLKEKGLYVKWEHNPMKVPRCA--KSNDVIEPIMKPQWWMKMESLVQPAI 486

Query: 160 ------------MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                          E  +FR     +      +       P                +L
Sbjct: 487 DAVEKGDIVIRPESAEKSYFRWMRNLNDWCLSRQLWWGHQAPAYFVKIEGEDGDDSDGNL 546

Query: 208 SLSRKT------------FDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++ +T                  +  DP  ++  W  +     +T G+           
Sbjct: 547 WVTGRTEEDARKKAEEKFPGKKFSLVRDPD-VLDTWFSSGLWPFSTLGWPRKTH-DFENL 604

Query: 256 WPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVID 312
           +P  +   G DIL F    +      ++  +P  ++V+ H  I    G K+SKSLGNVID
Sbjct: 605 YPTSVLETGWDILFFWVARMIMLGLKMTGQVPF-REVYCHSLIRDSDGRKMSKSLGNVID 663

Query: 313 PIEVI-------------------------------------EEVGVDALRYFLVREIAC 335
           PI+V+                                      E G DALR+ LV     
Sbjct: 664 PIDVMEGIQLQSLHDKLQLGNIADKEIAAATRYQKKAFPKGIPECGADALRFALVSYTTG 723

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSV 393
           G D  +D   +         N I       +  +  D+     +   G  + S+  IL  
Sbjct: 724 GGDIAFDIQVI--HGYRKFCNKIYQATKFVLGKLGDDFKPQAGVKKTGNESLSERWILHK 781

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +   +E+ E ++ +    +             D + +  K       + +   +     
Sbjct: 782 FNTAAKEMNEVLEQRDFSNSAQISYQYWYSQLCDVFLENSKYLLADDASAETKESAKQTL 841

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              +     L+   +P +   ++  L
Sbjct: 842 YTALEGALTLIHPIMPFVTEHLWQRL 867



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 21/139 (15%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTT 69
            I  PN     H+GHA    + D + R+ R+ G   L+  G D  G       +      
Sbjct: 138 PIPPPNVTGSLHMGHALTNALQDTMIRWQRMKGKTTLWLPGMDHAGISTQSVVEKMLWKK 197

Query: 70  -----------------KVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILW 110
                              + D+  +N ++    L  S+D      T +          +
Sbjct: 198 EKKSRHDIGREAMVNLIWDWKDEYHKNIKNALRRLGGSFDWSREAFTMDPNLSSAVTETF 257

Query: 111 KKISDKGDIYKGCYSGWYS 129
            ++ ++G IY+      + 
Sbjct: 258 VRLHEEGIIYRANRLVNWC 276


>gi|57530344|ref|NP_001006397.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Gallus gallus]
 gi|82233833|sp|Q5ZKA2|SYIM_CHICK RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
 gi|53131721|emb|CAG31841.1| hypothetical protein RCJMB04_12b19 [Gallus gallus]
          Length = 1000

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 117/366 (31%), Gaps = 43/366 (11%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D   +     Q       PV + ++ G     S     ++   E             +  
Sbjct: 500 DRRTFWCISRQRCWGVPIPVFYQKDTGESLINSETIADVIKIVEQQGTDAWWTLPIEQ-- 557

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                 L       K     +      Q ++ +W D+ T++       +           
Sbjct: 558 ------LLSKEAVAKAGGHNVLDYVKGQDVLDIWFDSGTSWAHVLEGAEQR--------- 602

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ GKD L   F +    +       P    V     +  KGEK+SKS+GNV+DP  
Sbjct: 603 ADVYLEGKDQLGGWFQSSLLTSVATRKKAPYKTLVVHGFTLGEKGEKMSKSIGNVVDPDV 662

Query: 316 V---------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           V             G D LR+++              + L   V  + A    N +  ++
Sbjct: 663 VINGGDDHTKDPPYGADVLRWWVAESNVFT-------EVLIGPVVLNAARDDINKLRNTL 715

Query: 367 SMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +L +  G  P      P      D+ +L +      ++ E  +     + +  + +  
Sbjct: 716 RFMLGNMAGFNPETDSIPPSEMYIVDQYMLHLLQDYGSKVTEAYKEYDYSKVVRLLQAFC 775

Query: 422 SE--VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           S    + YF   K     +   D +  +   V  E +  +       +P LA ++F  L 
Sbjct: 776 SRNLSNFYFSIIKDRLYCEEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLP 835

Query: 479 VADENR 484
              ++ 
Sbjct: 836 YKKDSE 841



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 14/160 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++  +     Y N  PH+GHA   I+ D+  RFH + G  V +  G D HG  I   
Sbjct: 90  KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYVPGWDCHGLPIELK 149

Query: 62  ------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                               K F ++     +       I  D  +  RT + ++     
Sbjct: 150 ALSEVKGAENLSPVEIRQKAKEFAERAIEKQKAAFIRWGIMADWANCYRTFDPKYEANQL 209

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            ++ K+ DKG IY+     ++S   +    + E+      
Sbjct: 210 RVFHKMYDKGFIYQDYKPVFWSPSAKTALAEAELEYNEQH 249


>gi|240117203|ref|ZP_04731265.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268602893|ref|ZP_06137060.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587024|gb|EEZ51700.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 929

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 108/321 (33%), Gaps = 30/321 (9%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G   L  S        +  D     M VW D+ + + +           +   WPADL++
Sbjct: 509 GWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVK------QREELEWPADLYL 562

Query: 263 IGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
            G D     F +        S      K++ +HGF++   G K+SKS+GNV+ P EV  E
Sbjct: 563 EGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNE 622

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D LR +            Y  +    +            +  ++S +  +     P 
Sbjct: 623 FGADILRLWAAS-------TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPI 675

Query: 380 PGAFT-----ESDESILSVCSRVLQEIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
             A       E D   L +  R+ + +          H A+  ++S  SE     Y D  
Sbjct: 676 EDAVQQADMVEIDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDIL 735

Query: 432 KPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K      K +     +       + R L +L+   +     + +DI+   +E+       
Sbjct: 736 KDRLYTTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTW 795

Query: 491 QRL-----KPGFMLHKTFDPI 506
                   K    L K +  I
Sbjct: 796 HEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|254492977|ref|ZP_05106148.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226512017|gb|EEH61362.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 929

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 108/321 (33%), Gaps = 30/321 (9%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G   L  S        +  D     M VW D+ + + +           +   WPADL++
Sbjct: 509 GWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVK------QREELEWPADLYL 562

Query: 263 IGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
            G D     F +        S      K++ +HGF++   G K+SKS+GNV+ P EV  E
Sbjct: 563 EGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNE 622

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D LR +            Y  +    +            +  ++S +  +     P 
Sbjct: 623 FGADILRLWAAS-------TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPI 675

Query: 380 PGAFT-----ESDESILSVCSRVLQEIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
             A       E D   L +  R+ + +          H A+  ++S  SE     Y D  
Sbjct: 676 EDAVQQADMVEIDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDIL 735

Query: 432 KPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K      K +     +       + R L +L+   +     + +DI+   +E+       
Sbjct: 736 KDRLYTTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTW 795

Query: 491 QRL-----KPGFMLHKTFDPI 506
                   K    L K +  I
Sbjct: 796 HEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|199598149|ref|ZP_03211571.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590910|gb|EDY98994.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 928

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 23/267 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 516 FTKEKDIMDVWFDSGSSHQAVLAQRP------ELSFPADLYLEGSDQYRGWFNSSLITSV 569

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
             +   P    +     +  KG K+SKSLGN I P  + ++ G + +R ++    +   D
Sbjct: 570 AATGIAPYRGILSQGFTLDGKGRKMSKSLGNTIVPSTIEKQFGAEIIRLWVATVDSS-SD 628

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D   +   ++    I N + R +     D+D              D  +L   ++
Sbjct: 629 VRVSVDNFAQ--TSEAYRKIRNTL-RFMVANTGDFDPEKDAVAYDQLGSVDRYLLVRLNQ 685

Query: 397 VLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDAQKPWELKK--TNPDR--ASTVLYV 450
           ++ +++E             + S  V+++   Y D  K     +   +P R    TV+Y 
Sbjct: 686 IIAKVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEAANDPKRRSMQTVMYT 745

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL 477
               +  L  LL   +P  A +++  L
Sbjct: 746 ---ALLDLTKLLTPILPHTAEEVWPYL 769



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     + N   H+GHA   I  D++ R+  ++G    +  G D HG  I + 
Sbjct: 45  EGKPTFMLHDGPPFANGNIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIR------------TTEKRHHDTCR 107
               GV  K     + R       + +I     DF R            T +  +  +  
Sbjct: 105 LAKQGVKRKEMSMTDYRELCRQFAMKEIDKQRTDFKRLGVMGDWEHPYITLQHAYEASEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++ KG IY G    ++S   E+   + E+    D         PV
Sbjct: 165 RVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEIEYHDDKSPSIYVAFPV 214


>gi|326429971|gb|EGD75541.1| valyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 1090

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 98/309 (31%), Gaps = 45/309 (14%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIY 274
           G+ +  D   ++  W  +        G+ D         +P ++   G DIL F    + 
Sbjct: 566 GLVVVQDED-VLDTWFSSALYPFAAFGWPDTSTEDFRSHYPTNVLETGHDILFFWVARMV 624

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV------------------ 316
                L+  LP  + V        KG K+SKSLGNVIDP++V                  
Sbjct: 625 MLGLELTDTLPFKEVVLHAMVRDAKGRKMSKSLGNVIDPLDVVYGSALAEEMIAKLHKGN 684

Query: 317 --------------------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLAN 356
                               I   G DALR+ L      G+D   + + +    +  L N
Sbjct: 685 LDARELKEATANIEKEFPKGIPSCGADALRFALCAYTTQGRDINLNINRVVAAKS--LCN 742

Query: 357 GIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQ 416
            + N V    S +          P      +  I+       + +    +          
Sbjct: 743 KLWNAVGYVNSKLPAGGGSTPSAPNRHHRMNVWIVQQLHATARVVDAGFRTFDFAAVTTA 802

Query: 417 VISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           +      S  D Y +  K      +  ++    L   V   R    LL   +P +A +++
Sbjct: 803 LHDFWIKSYCDVYLEWTKAVLSDASMSEQHDATLSTLVHTARCALTLLAPIMPHIAQELY 862

Query: 475 DILFVADEN 483
             L   +++
Sbjct: 863 TQLPRHEDD 871



 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 25/155 (16%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV-- 67
               PN     H+GHA  + + D LAR+ R+ GL+  +  G D  G       +      
Sbjct: 114 MFPPPNVTGSLHLGHALTIAVQDALARWSRMRGLETTWVPGVDHAGIATQTVVEKQVHKQ 173

Query: 68  -------------------TTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTC 106
                                +          R     +  S D    + T + +     
Sbjct: 174 EGLTRHDLGRDAFLGRVWQWKEDRAHDILEQARGAVHRMGASLDWSRMVFTLDDKFTRAT 233

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  + ++ D+G I +  +   +S   ++  +D EV
Sbjct: 234 KTAFVRLFDRGLIQRRNHCINWSCTLQSAISDMEV 268


>gi|118096783|ref|XP_414300.2| PREDICTED: similar to isoleucyl-tRNA synthetase [Gallus gallus]
          Length = 1264

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 93/262 (35%), Gaps = 11/262 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 523 VFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRP 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G+K+SK   N  DP+ ++   G DALR +L+       ++  + +
Sbjct: 583 PFKNVIVNGLVLASDGQKMSKRKKNYPDPMAIVNSYGADALRLYLINSPVVRAENLRFKE 642

Query: 344 DGLKKRVNADL---ANGIGNLVSRSVSMILKDYDGMIPTPGAFTES----DESILSVCSR 396
           +G++  +        N    LV     +  K +   +       ES    D+ ILS    
Sbjct: 643 EGVRDILKDVFLPWYNAYRFLVQNVHILQHKVWIEFLYNENTVKESNNIMDKWILSFTQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q  +  M    ++  + +++  V    + Y    +     +   +     L     V+
Sbjct: 703 LIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
             +  L+  + P +   ++  L
Sbjct: 763 FSMCRLMAPYTPFITELMYQNL 784



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I D++ RF    G  V    G D HG  +   
Sbjct: 36  KNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYE 95

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRH 102
                        A +    + +Q        +   +         I +++  +T     
Sbjct: 96  IDKTLGIKGPEDVAKMGIAEYNNQCRGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEF 155

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   ++K++ DKG +Y+G     +S       ++ E ++   
Sbjct: 156 MESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYK 199


>gi|108708017|gb|ABF95812.1| Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group]
          Length = 1012

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 119/381 (31%), Gaps = 45/381 (11%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +    +  +Y    N   W     +++        +    +         +R    I   
Sbjct: 468 IPPQYEQDWYRWLENIRDWCVSRQHWWGHRVPAWYVTLEDDQEKTLGSDNDRW---IVAK 524

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                 +   +        +  DP  ++  W  +    L   G+ D+    ++ F+P  +
Sbjct: 525 SESAASVEAQKSYPGKKFILNQDPD-VLDTWFSSALFPLAVLGWPDDTADLRS-FYPTSV 582

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DIL      +      L  ++P  K           G K+ KSLGNVIDP+EVI 
Sbjct: 583 LETGLDILFCWVARMVMMGTQLGGDVPFQKVYLHPIVCDTHGRKMCKSLGNVIDPLEVIN 642

Query: 319 EVGVDALRYFLVREIACGKDGFY------DKDGLKK------------------RVNADL 354
            + ++ L   L        +           DG+ +                  R+N D+
Sbjct: 643 GMTLEGLVKRLEEGNLDPDELNLERKLTDYPDGIAECGTDALRFALISYTSQSDRINLDI 702

Query: 355 -----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIREN 404
                     N +  ++   +         P            + ILS  ++   +   +
Sbjct: 703 KRVVGYRQWCNKLWNAIRFAMGKLGVHYSPPATVDVSIMPPICKWILSALNKATGKTVTS 762

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK-TNPDRASTVLYVTVEV-IRQLAI 460
           ++      A + + S       D + +A KP+   +    + A      T+ V +     
Sbjct: 763 LEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNEPQEFESARVASRDTLWVCLETGLR 822

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL  F+P +  +++  L    
Sbjct: 823 LLHPFMPYITEELWQHLPQPK 843



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 15/132 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 126 STKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVV 185

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTCRILWKKISDKGD 118
            +   +  +                 DI  D+F+    T +++  +     + ++  +G 
Sbjct: 186 VEKKLMRERNLT------------RHDIGPDNFVCEAFTMDEQRSNAVTEAFVRLHKEGL 233

Query: 119 IYKGCYSGWYSL 130
           IY+      +  
Sbjct: 234 IYRDNRLVNWDC 245


>gi|86131630|ref|ZP_01050228.1| valine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85818075|gb|EAQ39243.1| valine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 877

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 101/285 (35%), Gaps = 16/285 (5%)

Query: 224 PQYIMYVWIDALTNYLTTTGY-LDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLL 280
            +  M  W  +    ++      +  +     ++P +  V G DIL F    +    +  
Sbjct: 454 DEDAMDTWFSSWLWPMSVFDGVRNPDNEEFNYYYPTNDLVTGPDILFFWVARMIIAGYEY 513

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P      +      +  K+SKSLGN  D +E+I+E G D +R  L+   A G D  
Sbjct: 514 TDKRPFQNVYLTGLVRDKQRRKMSKSLGNSPDALELIKEYGADGVRVGLLLSSAAGNDLM 573

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D+D LK+         I   +S    +   + D  IP P    +  E   +  ++ L E
Sbjct: 574 FDEDLLKQGK-----GFIKKNLSAFSLIQGWEIDETIPQPAHSAQGIEWYTNRFNQTLLE 628

Query: 401 IRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           I ++     I  AL     +V         +  KP   +  +           +      
Sbjct: 629 IEDHFSKYRISDALMASYKVVWNDFCGWLLEIIKPAYQQPIDRK----TYDAVIAAFENN 684

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTF 503
             +L  F+P  + +I+  +           +  +   G  +++  
Sbjct: 685 LRILHPFIPFASEEIWQTIATRTPEEAL--IINKWPEGGAVNEKI 727



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA- 61
           +RE   I           H+GH     I DVL R  RL G +  +  GTD          
Sbjct: 32  DREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARLLGKNACWVPGTDHASIATEAKV 91

Query: 62  ---------------AQNAGVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
                           +        + ++      D    L  S  +D    T +    +
Sbjct: 92  VARLKEQGIKKSDLTREEFLAHAWEWKEEYGGVILDQLKKLGASCDWDRTAFTMDPAMSE 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           +    +  + +KG IY+G     +    +   +D+EV  
Sbjct: 152 SVIKTFVDLYNKGLIYRGYRMVNWDPEAKTTLSDEEVIH 190


>gi|329118022|ref|ZP_08246735.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465910|gb|EGF12182.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 928

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 95/279 (34%), Gaps = 26/279 (9%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +            P
Sbjct: 534 MDVWFDSGSTHYSVLK------QREELAWPADLYLEGSDQHRGWFQSSMLTGCATLGRAP 587

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +   G K+SKSLGNV+ P EV  E G D LR +            Y  + 
Sbjct: 588 YKQLLTHGFVVDQDGRKMSKSLGNVVAPQEVYNEFGADILRLWTAT-------TDYSGEL 640

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQE 400
              +            +  ++  +L +     P   A       E D   L +  R+ ++
Sbjct: 641 AISKEILKRVTESYRRLRNTLRFLLANLSDFHPIEDAVPQADMVEIDRYALVMARRLQEK 700

Query: 401 IR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKT--NPDRASTVLYVTVEVI 455
           +  +       H A+  +++  SE     Y D  K   L  T        +       + 
Sbjct: 701 LAGDYYPRYAFHFAVQDIVAFCSEDLGAFYLDILKD-RLYTTPAGSHARRSAQTALYHIT 759

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
           R L +L+   +   A + +DI+   +E+           
Sbjct: 760 RSLVLLVSPILCFTAEEAWDIIGGGEEDSVLFHTWHDFP 798



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R   L G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIILRSKTLAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAG--VTTKV--------FVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCRIL 109
            +        K         +  +     +     L +  D      T + +        
Sbjct: 106 VEKLHGRDMPKAKFRELCRSYAAEQIARQKKDFIRLGVLGDWEHPYLTMDYKTEADTVRT 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKAGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|296242742|ref|YP_003650229.1| valyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095326|gb|ADG91277.1| valyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 818

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 126/386 (32%), Gaps = 20/386 (5%)

Query: 100 KRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQW 159
           +RH     + W+  +    I+   Y               E+       +     + +  
Sbjct: 343 ERHVHRVPVCWRCKTPVQIIHSREYFLRQLDFKNELLELIELMDFKPLMHKKKLIDWINS 402

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
           +  +    R   Y  ++  +       +L  E       +      D   +       I+
Sbjct: 403 VSADWPISRDRYYATEVPVWRCRRCGSVLLPEPGKYYRPWKDPAPWDKCPACGAPRDEIE 462

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPA 277
                + +   W D+  + L  TGYL N +    K +   L   G+DI+R    Y     
Sbjct: 463 ---GERKVFDTWFDSSISVLYVTGYLRNHE-LFKKAFRNTLRPQGQDIIRTWLYYTILRT 518

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
           + L+          +   +  KGE + KS GNVIDP   +E+ G DA RY+       G 
Sbjct: 519 YQLTGQPAFKWVRITGMGLDEKGEAMHKSKGNVIDPDPYVEKYGADAFRYWAAASSKLGY 578

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D  + +  +K       A  + N+     S          P        D + L++ + V
Sbjct: 579 DYRFSEQLVK--TGLLFATKLWNISRFVSSF-------PEPEDYELRPIDRATLALFNNV 629

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP-DRAST--VLYVTV 452
           L  + +      ++     + S   +     Y +  K     +     R       Y   
Sbjct: 630 LVRVDKAYSELDVYEPATLIYSFTWDYFASHYIELVKSRAYNRDEKYSRLEQYGAWYTLH 689

Query: 453 EVIRQLAILLQAFVPKLANKIFDILF 478
            V+R++   L   +P + + I+  L+
Sbjct: 690 YVLRRILRTLSPIMPFVTDAIYRELY 715



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 19/154 (12%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-KAA 62
           RE + I T   Y + + H+G A      D++AR+ R+ G +VL     D +G  +  +A 
Sbjct: 41  REIIAIDTPPPYASGKWHVGGAAHYAQIDMIARYFRMKGYNVLVPFYADRNGLPVEVQAE 100

Query: 63  QNAGVTTKVFV-----------------DQNSRNFRDMADVLDISYDDFIR-TTEKRHHD 104
           +  GV                       D+  +N  ++   L  S+  ++  T    +  
Sbjct: 101 KKLGVNPHELAKTPEGRERFLEACKSFLDEAEKNIVNVWRRLGCSFQYWVNGTDSPEYRA 160

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
             +  + ++  KG IY+      +  R +    D
Sbjct: 161 LTQATFIELYKKGLIYEAERPVNWCPRCKTTLAD 194


>gi|224543023|ref|ZP_03683562.1| hypothetical protein CATMIT_02217 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524048|gb|EEF93153.1| hypothetical protein CATMIT_02217 [Catenibacterium mitsuokai DSM
           15897]
          Length = 821

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 7/198 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+ Q  H+GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 53  SKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYNVLHPMGFDSFGLPAEQY 112

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N + F     +L  S+  D  + T +   +   + ++K++ + G  
Sbjct: 113 AIKTGNHPEGFTLKNIQTFTKQLKMLGFSFDWDKQVSTCDPSFYKWTQWIFKQLYEDGLA 172

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         +DE+  G   +       PV     + +   +  Y ++LL+ 
Sbjct: 173 RYVDIPVNWCEELGTVLANDEIIDGKSERGGF----PVIRKNMKQWVIDIPKYAERLLAG 228

Query: 180 YESHPEFILPIERRNEVI 197
            E         E +   I
Sbjct: 229 LEEVDWPESTKEIQRNWI 246



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 45/255 (17%)

Query: 233 DALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFL--------LSAN 283
                Y+         D    K W P DL+V G +    H +Y   +         +   
Sbjct: 520 WYFLRYIDPHNDKAIADPELLKHWMPVDLYVGGPEHAVGHLLYSRMWNNYLYDKGIVPVK 579

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDK 343
            P  K       +   G K+SKS GNVI+P +++E  G D LR + +          + +
Sbjct: 580 EPFKKLYHQGMILGPNGVKMSKSKGNVINPDDIVEAYGADTLRLYEMFMGPLEASKPWSE 639

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G++              + R   + ++         G+          V    ++++ E
Sbjct: 640 TGVEGS---------KKWLERVYRLFVESDKLTDTNDGSLDF-------VYHSTVKKVTE 683

Query: 404 NMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
           + +N   + A++Q++  ++E  +                 A  V     E I     +L 
Sbjct: 684 DYENLGFNTAISQMMIFINEAYK-----------------AKAVYKPYAEGI---VKMLS 723

Query: 464 AFVPKLANKIFDILF 478
              P +  ++++ L 
Sbjct: 724 CIAPHICEEMWEKLG 738


>gi|222475207|ref|YP_002563623.1| isoleucine-tRNA ligase (ileS) [Anaplasma marginale str. Florida]
 gi|255003186|ref|ZP_05278150.1| isoleucyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255004317|ref|ZP_05279118.1| isoleucyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|222419344|gb|ACM49367.1| isoleucine-tRNA ligase (ileS) [Anaplasma marginale str. Florida]
          Length = 1101

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 77/456 (16%), Positives = 151/456 (33%), Gaps = 36/456 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMA-----DVLDISYDDFIRTTEKRH 102
               D+ G+  A     AG      VD   R  ++       +    SY    RT     
Sbjct: 367 ICPIDDAGRFTAAVGDFAGQHVFDVVDAVIRQLKEKGLWFATEQCTHSYPHCWRTDTPLI 426

Query: 103 HDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      +    K  +   ++ K        ++   +    +  K      +     PV 
Sbjct: 427 YRATSSWYVEVTKLKARMVELNKEVNWVPEHVQSGQFGKWLDGAKDWSVSRHRFWGAPVP 486

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +   +  +       S  +  P+     E    V    +  + +L         G 
Sbjct: 487 VWRSDDPKYPRTD---VYGSIKKVLPDVKALEEDFGPVEDLHRPYIDNLVRPNPDDPTGK 543

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH--VIGKDILRFHAIYWP 276
            +      ++  W ++ +       Y           +PAD     I +    F+ ++  
Sbjct: 544 SMMRRVPDVLDCWFESGSMPYAQMHYPFENKEFFDSHFPADFITEYIAQTRGWFYTLFVL 603

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR-EIAC 335
           +  L    P    +     +  KG+K+SK L N  DP+E+ E+ G D++R+ ++   ++ 
Sbjct: 604 STGLFDRHPFKSCICHGVVLDIKGQKLSKRLNNYPDPMEMFEKYGADSVRFTMLSHAVSI 663

Query: 336 GKDGFYDKD-GLKKRVNADLANGIGNLVSRSVSMILKDYDGMI-----PTPGAFTESDES 389
           G D   D+D  + +     +   I N  S     +  + D M         G     D+ 
Sbjct: 664 GGDLLLDQDGDVVRDTLKSVVKPIWNSYSFFT--VYANSDQMQGRILESLEGITNIMDQY 721

Query: 390 ILSVCSRVLQEIRENMQN--------QLIHRALAQVISLVSEV-DRYF--DAQKPWELKK 438
           IL  C+ ++ ++ E M++          I  A A ++    ++ + Y      + W   K
Sbjct: 722 ILYECACMVVKVLEAMESSSAGVRDPYNIRLACAAIVQFSDKLNNWYIRGCRGRFWMRDK 781

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
           T     S        V+  LA  +  F+P +A  I+
Sbjct: 782 T--ADKSDAYNTLYTVLYHLARTIAPFLPFIAESIW 815



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 23/212 (10%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH     I D +AR+  + G  V    G D HG      A+         
Sbjct: 49  PPFANGLPHYGHLLTGFIKDAVARYKTMRGFRVERKFGWDCHGLPAEMLAEKELGVSGKV 108

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   F  Q           +D  +++  RT +K   ++    + 
Sbjct: 109 SIESFGIDKFNDYCRSSIMRFTQQWREYVERQGRWVD--FENGYRTMDKSFMESVMWAFH 166

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
           ++  KG +Y+      YS   +   ++ E       +   ++   V++   E   F    
Sbjct: 167 ELWHKGLVYESVKVVPYSWACQTPLSNFETKMDNAYREKVSKSVTVRFKLSEQVGFVPQG 226

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
            +   +  + + P  ++         +    G
Sbjct: 227 VESCSILAWTTTPWTLVSNFALAINTNMDYVG 258


>gi|24375036|ref|NP_719079.1| isoleucyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81459913|sp|Q8EBI4|SYI_SHEON RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24349779|gb|AAN56523.1|AE015789_10 isoleucyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 940

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 133/412 (32%), Gaps = 43/412 (10%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D      Q       +QW+ + G      
Sbjct: 398 HHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNHNLRKQALSEIEQIQWIPDWGQSRIEK 457

Query: 171 AYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
             +++          + +P    + R  E +      L     +R     GI+   D   
Sbjct: 458 MVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMARVANRIE-QEGIQAWWDLDA 516

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                            + VW D+ + + +         G        DL++ G D    
Sbjct: 517 AELLGEEAEQYRKVTDTLDVWYDSGSTFASVVAARPEFHGHG-----VDLYLEGSDQHRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +  ++   P  + +     +  KG K+SKS+GNVI P +V  ++G D LR +
Sbjct: 572 WFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLW 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTES 386
           +      G+    D+  +  R +AD    I N   R +   L  +D              
Sbjct: 632 VAATDYSGEMTVSDE--ILNR-SADAYRRIRNTA-RFLLANLNGFDPKNDLVAVEDMVAL 687

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDR 443
           D   +   + + QEI E  +    H    +++   S      Y D  K  +   K     
Sbjct: 688 DRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFYLDIIKDRQYTAKQEGHA 747

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
             +       +   +   +   +   A++++ +L    +   F Q   Q L+
Sbjct: 748 RRSCQSALFHIAEAMVRWIAPVLSFTADEVWQLLPGQRDAYVFTQEWYQGLQ 799



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 64/205 (31%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ +D   +DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHSVSMVIWTTTPWTLPANR 251


>gi|158316956|ref|YP_001509464.1| valyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112361|gb|ABW14558.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp.
           EAN1pec]
          Length = 876

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 94/271 (34%), Gaps = 20/271 (7%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
              DP  +M  W  +    L  +G+  +P    A+ +P +L     +I+     +    +
Sbjct: 505 FMADPD-VMDTWATSSLTPLIASGWESDPA-LFAQVFPMNLRPQAHEIIRTWLFSTVLRS 562

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                 LP      S   +    +K+SKS GNV+ P+ ++E+ G DA+RY+       G 
Sbjct: 563 HDEFGTLPWTDAAISGWILDPDRKKMSKSKGNVVTPMGLLEQHGSDAVRYWAASGRP-GT 621

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF------------TE 385
           D  +D   +K      LA  I N     + +             A               
Sbjct: 622 DTAFDVGQMK--TGRRLAIKILNASRFVLGLAEAGEGEAFEGDAALAADAAPGPAAITEP 679

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRA 444
            D ++L+  +RV+       +     RAL    +      D Y +  K           A
Sbjct: 680 LDRALLAELARVVDTATGAFEGYDYTRALEVTETFFWRFCDDYVELVKGRAYGGHGEAGA 739

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           ++        +  L  L   F+P +  +++ 
Sbjct: 740 ASARATLSIALSTLLTLFAPFLPFVTEEVWS 770



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 36/162 (22%)

Query: 4   REKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           RE++Y + T     +   H+GH +     D++ARF R+ G +V +  G D++G    +  
Sbjct: 45  RERVYSVDTPPPTVSGSLHVGHVFSYTHTDLIARFQRMRGREVFYPMGFDDNGLPTERRV 104

Query: 63  QN-------------AGVTTKV--------------------FVDQNSRNFRDMADVLDI 89
           QN                T                          ++ + F ++   L +
Sbjct: 105 QNYYGVRCDPSLPYDPDFTPPEKPGKDQLPISRRNFVELCETLTIEDEKGFEELWRRLGL 164

Query: 90  SYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           S D      T + R     +  + +   +G  Y       + 
Sbjct: 165 SVDWSHTYATIDTRSRAVAQRAFLRNLARGQAYLAEAPTLWD 206


>gi|307564823|ref|ZP_07627351.1| leucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346545|gb|EFN91854.1| leucine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 960

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  ++N   +R+  D +     +D  IRT +  ++   +  ++ +     
Sbjct: 88  YAIQTGQHPAITTEKNIARYREQLDKIGFCFDWDREIRTCDPEYYHWTQWAFQLMFASYF 147



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 72/178 (40%), Gaps = 37/178 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++ + G D LR + +          +D +G+         +G   
Sbjct: 737 EKMSKSMFNVVNPDLIVNQYGADTLRLYEMFLGPIEASKPWDTNGI---------DGCHR 787

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  ++     P+  +        L    ++++++  ++++   + A++  +  
Sbjct: 788 FLRKFWKLFQQELTNDEPSKDS--------LKSVHKLIKKVTSDIESFSYNTAISAFMIC 839

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
            +E                             ++++QL IL+  F P +A ++++ L 
Sbjct: 840 TNE--------------------LGQQKCTNKKLLKQLIILIAPFAPHIAEELWEQLG 877


>gi|317478093|ref|ZP_07937268.1| leucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905691|gb|EFV27470.1| leucyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 945

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCEPEYYHWTQWAFQKMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       EA+
Sbjct: 148 CNDEKQARPIQELIEAF 164



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 95/222 (42%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDLEAFKAWRPEYETAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VDKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFYDRNDNY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + +
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FGM 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ Q  I+L  F P +  ++++ L 
Sbjct: 832 KCSKK-----------EILNQFIIVLAPFAPHVCEELWETLG 862


>gi|268608894|ref|ZP_06142621.1| leucyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 810

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 64/186 (34%), Gaps = 7/186 (3%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y      YP+    H GH       D+++R  R+ G +VL   G D  G    + 
Sbjct: 31  SKPKFYALDMFPYPSGVGLHAGHPEGYTATDIVSRMKRMQGYNVLHPMGYDSFGLPAEQY 90

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G     F  +N + F      L   YD    I T++   +   + ++K++   G  
Sbjct: 91  AVTTGNHPNGFTQENIKTFSKQLKELGFDYDWSKMIATSDPEFYKWTQWIFKQLYMDGYA 150

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +        ++DEV  G           PV     + +     A+ +KLL  
Sbjct: 151 KYIDMPVNWCEELGTVLSNDEVIDGKS----ERGGYPVVRKNMKQWVIDQPAFAEKLLEG 206

Query: 180 YESHPE 185
            +    
Sbjct: 207 LDEIDW 212



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 92/264 (34%), Gaps = 47/264 (17%)

Query: 238 YLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFHAIYWPAFLLS--------ANLPLPK 288
           Y+      +  +    K W P DL++ G +    H IY   +              P  K
Sbjct: 513 YIDPHNDKEFANQELLKHWMPVDLYIGGPEHAVGHLIYSRIWNRYLYDKGLAPTKEPFKK 572

Query: 289 KVFSHGFILHKGEKISKSLGN-VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
            V     +   G K+ K     V++P +++ + G D LR + +          + K+G++
Sbjct: 573 LVHQGMILGENGIKMGKRFPEFVVNPSDIVRDYGADTLRLYEMFMGPLEVSKPWSKNGVE 632

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                    G    + R  +   +  +      G+ T        V  + ++++ ++ + 
Sbjct: 633 ---------GAKRFIQRVWNFFTEAENLTDDNDGSLT-------KVYHKTVKKVTDDYEK 676

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + A++Q++  V+EV +                    V     E    L  +L    P
Sbjct: 677 LAFNTAISQMMIFVNEVYK--------------------VGKCPREYAEGLIKMLSCITP 716

Query: 468 KLANKIFDILFVADENRCFQSLDQ 491
            +  +I++I+   D    F+S   
Sbjct: 717 HMGEEIWNIMGHND-TIAFESWPT 739


>gi|254780445|ref|YP_003064858.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040122|gb|ACT56918.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 963

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 132/385 (34%), Gaps = 32/385 (8%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           T +         GD           +    ++       G +      ++ P      + 
Sbjct: 445 TSQWFLHMDKKLGDGSTLRSRALSEVEKIRFFPSS----GKNRLRSMIENRP------DW 494

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI-----K 219
              R   +   +  +Y    E +L     + +I   K    D   S  + D+ +     +
Sbjct: 495 LLSRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQGSDAWFSEGSRDFFLGDRASE 554

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPA 277
                + I+ VW D+   +    G            WPAD+++ G D     F      +
Sbjct: 555 PWIQSKDILDVWFDSACTHTILLG------KDPKLAWPADVYLEGSDQHRGWFQHSLLES 608

Query: 278 FLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGK 337
                + P    +     +   GEK+SKS GNV+ P E+I E G D LRY+ V       
Sbjct: 609 CATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAVNSDY-HD 667

Query: 338 DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRV 397
           D    K+ ++   N D    + N +   + M+  D     P+       ++ +L   + +
Sbjct: 668 DQRLGKNIIQ--TNIDTYRKLRNTIRWMLGMLAHDTGNE-PSLADMPALEQLMLHRLTEL 724

Query: 398 LQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTV--E 453
            Q +RE          + Q+ +  +      YFD +K   L   +P     +  + V   
Sbjct: 725 DQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKD-SLYCDSPSSLKRLSSIAVIRI 783

Query: 454 VIRQLAILLQAFVPKLANKIFDILF 478
           + R L I +   +P  A + +  L 
Sbjct: 784 LCRHLIIWIAPILPFTAEEAWLSLN 808



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 50/165 (30%), Gaps = 13/165 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +     Y N   HIGHA   I+ DV+ R  ++   +  F  G D HG       
Sbjct: 52  GRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCHGL------ 105

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
                    +  +N           DI  ++F +          +I  K+    G +   
Sbjct: 106 ------PIEWKVEN-EYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDF 158

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
                   R+       E+ K A+         P+ W   E    
Sbjct: 159 ENPYTTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTL 203


>gi|332044662|gb|EGI80856.1| leucyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 1020

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            ++ K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D  G    +
Sbjct: 28  SDKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V  + N + +R   D +  S+D    +RT+   ++   + ++ ++ +   
Sbjct: 88  YAIQTGQHPAVTTETNIKTYRRQLDQIGFSFDWSREVRTSNPEYYKWTQWIFIQLFESYY 147

Query: 119 IYK 121
              
Sbjct: 148 CNN 150



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 69/178 (38%), Gaps = 33/178 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P +++ + G D+LR + +      +   ++  G+           +  
Sbjct: 794 EKMSKSKYNVVNPDDIVRDYGADSLRLYEMFLGPLEQYKPWNTAGITGVHG--FLKKLWK 851

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L      + + + +                L    + ++++ E+++N   + +++  +  
Sbjct: 852 LYVDENGLKVNNAEPTKDN-----------LKTLHKTIKKVEEDIENFSFNTSVSTFMIA 900

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           V+E                           + E++  L +L+  + P +A +++ +L 
Sbjct: 901 VNE--------------------LGAQKCTSKEILEPLLVLVSPYAPHIAEELYKMLG 938


>gi|160888060|ref|ZP_02069063.1| hypothetical protein BACUNI_00468 [Bacteroides uniformis ATCC 8492]
 gi|156862371|gb|EDO55802.1| hypothetical protein BACUNI_00468 [Bacteroides uniformis ATCC 8492]
          Length = 945

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCEPEYYHWTQWAFQKMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       EA+
Sbjct: 148 CNDEKQARPIQELIEAF 164



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 95/222 (42%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDLEAFKAWRPEYETAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VDKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFYDRNDNY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + +
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FGM 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ Q  I+L  F P +  ++++ L 
Sbjct: 832 KCSKK-----------EILNQFIIVLAPFAPHVCEELWETLG 862


>gi|220936373|ref|YP_002515272.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782451|sp|B8GQR1|SYI_THISH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219997683|gb|ACL74285.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 937

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 101/274 (36%), Gaps = 18/274 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+   + T T              PADL++ G D     F +    +  +    P
Sbjct: 531 LDVWFDSGVTHATVTDKRA------ELGLPADLYLEGSDQHRGWFQSSLLTSVAMRGTAP 584

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +  +G+K+SKS GNV+ P +V++ +G D LR ++       +    D+  
Sbjct: 585 YKAVLTHGFTVDAQGQKMSKSKGNVVAPQKVVDTLGADILRLWVAATDYSAEMAVSDE-- 642

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRE 403
              +  AD    + N   R +   L  +D    +  PG     D   +    +V Q++  
Sbjct: 643 -ILKRTADAYRRMRNTA-RFLLANLTGFDPARDMLAPGQMLPLDRWAVDQALKVQQKVTG 700

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
             +    H+   +V +  S      Y D  K  +   K +     +       +I  +  
Sbjct: 701 AYEQYQFHQIYQRVHNFCSVELGSFYLDVIKDRQYTTKADSIARRSAQTAMYHIIEAMVR 760

Query: 461 LLQAFVPKLANKIFDIL-FVADENRCFQSLDQRL 493
            L   +   A +I+  +    +E+  F +  Q L
Sbjct: 761 WLAPILSFTAEEIWQEIPGERNESVLFNTWYQGL 794



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R +  ++    Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GRPRFVLADGPPYANGNIHIGHAVNKILKDIIVKSRTLAGFDAAYIPGWDCHGLPIELQV 106

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
           +                   + +  +   + R     L +  D      T + +      
Sbjct: 107 EKKIGKVGHEVDAAAFRKACREYALEQVDSQRQDFKRLGVLGDWEKPYLTMDYQVEADTV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +I ++G + KG     + +   +   + EV  
Sbjct: 167 RALGRIIERGHLMKGEKPVHWCVDCGSALAEAEVEY 202


>gi|73666721|ref|YP_302737.1| valyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|90101526|sp|Q3YT16|SYV_EHRCJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72393862|gb|AAZ68139.1| valyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 802

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 69/361 (19%), Positives = 134/361 (37%), Gaps = 28/361 (7%)

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
            + +    ++      Q      +P    ++   +     +   +         F +   
Sbjct: 362 HQWFIKVVDIKHELLKQVQKINWHPQSMRKQIEIWIEGLNWDWCISRQRYFGVPFPVWYS 421

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGS 251
           +  ++I    + L     +     +     +    +M  W  +  +              
Sbjct: 422 KDGKIILPDINKLPIDPTNDLPEGYQDTEIEVETDVMDTWATSSLSTQFHNISAT----- 476

Query: 252 KAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGN 309
                PADL     +I+R  A Y    A+  + ++P    + S   +     K+SKS GN
Sbjct: 477 -----PADLRAQSHEIIRSWAFYTILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGN 531

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK--KRVNADLANGIGNLVSRSVS 367
           V+ P ++++E G D +RY+       G D  +  + LK  KR    L N      S+ VS
Sbjct: 532 VLTPNKLLDEYGADVVRYWTANSK-LGADTTFSNEILKLGKRFTTKLWN-----ASKFVS 585

Query: 368 MILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EV 424
           M +  Y    P     TE  D+ ILS   +V+ +  E+  +     AL  + S       
Sbjct: 586 MFIDQY--SEPDLQYITETMDKWILSKLYKVIVKATESFNSFEYCIALDCIESFFWKDFC 643

Query: 425 DRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE 482
           D Y +  K     +  +  +  S V  ++  V+R+L  +L  F+P +  +I+  L+ ++ 
Sbjct: 644 DNYLELSKKRAYGELISKQEHLSAVNTLSF-VLRELLKMLAPFMPYVTEEIYRTLYSSNN 702

Query: 483 N 483
           +
Sbjct: 703 S 703



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 15/150 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------K 60
             I T     + Q HIGH +     D +AR+ R+ G DV +  G D++G          K
Sbjct: 38  FVIDTPPPTISGQLHIGHVFSYCHTDFIARYQRMLGKDVFYPIGFDDNGLPTERLVEKTK 97

Query: 61  AAQNAGVTTKVF-------VDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCRILWK 111
             +   ++ K F         +    F+ +   + ISYD      T  K      +  + 
Sbjct: 98  KIRATDISRKEFKTICTQVSHEFRIQFKQLFQSIGISYDWDLEYHTISKDIQKISQTSFI 157

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            + +KG +Y+     ++   D+      EV
Sbjct: 158 NLYNKGKLYRKLQPIFWDCIDKTAIARAEV 187


>gi|270295093|ref|ZP_06201294.1| leucyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274340|gb|EFA20201.1| leucyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 945

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCEPEYYHWTQWAFQKMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       EA+
Sbjct: 148 CNDEKQARPIQELIEAF 164



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 95/222 (42%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDLEAFKAWRPEYETAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VDKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFYDRNDNY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + +
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FGM 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ Q  I+L  F P +  ++++ L 
Sbjct: 832 KCSKK-----------EILNQFIIVLAPFAPHVCEELWETLG 862


>gi|15897625|ref|NP_342230.1| isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus P2]
 gi|74566731|sp|Q9UXB1|SYI_SULSO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|6015754|emb|CAB57581.1| isoleucyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813890|gb|AAK41020.1| Isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus P2]
          Length = 986

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 129/359 (35%), Gaps = 15/359 (4%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                     +     ++        F  +     +     +        E  +  I  V
Sbjct: 371 WIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICERCNNVMVVGSKEELESIAIDPV 430

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            + L    +               +   +  VW D+   +  + G        +    P 
Sbjct: 431 PNDLHRPWIDNVRVKCNKCGGVAKRIPDVADVWFDSGVAFFASLGKDWQEKWKELG--PV 488

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL + G D L   F ++     +L    P    +     +  +G ++ KSLGN ++P  V
Sbjct: 489 DLVLEGHDQLRGWFFSLLRSGLILLDRAPYTSVLVHGFMLDEQGREMHKSLGNYVEPSVV 548

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR +L+R     +D  +    L +    DL       V  S+ M L +++  
Sbjct: 549 VEKYGRDILRLWLLRNTT-WEDAKFSWKAL-ELTKRDLQIIWNTFVFASMYMNLDNFEPD 606

Query: 377 IPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDA 430
             T           D  ILS  + +L+++ E+M++  +H     +I+  + +V R Y   
Sbjct: 607 KYTLDDIIKYAKIEDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRL 666

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
            +     + N      + Y+   +++Q  IL    +P ++ KI+    V A E+   +S
Sbjct: 667 IRKRAWIEANTQDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 725



 Score = 47.1 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 20/137 (14%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------------------GVTTKV 71
           I D + R+ R+ G  V    G D HG  I  A +                        K 
Sbjct: 2   IKDCILRYQRVLGKRVHDQPGYDTHGLPIEVATEKLLGISNKQEIIDKIGVETFINKCKE 61

Query: 72  FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           F   N+         + +   ++    T +  +  +   + KK  +KG + KG     + 
Sbjct: 62  FALSNADKMTQNFKNVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWC 121

Query: 130 LRDEAYYNDDEVYKGAD 146
            R E   +D EV +  D
Sbjct: 122 PRCETTLSDYEVSEYRD 138


>gi|313158306|gb|EFR57708.1| leucine--tRNA ligase [Alistipes sp. HGB5]
          Length = 918

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R K Y+     YP+    H+GH    I +D+ +R+ R  G +VL   G D  G    + 
Sbjct: 29  SRPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRQKGFNVLHPMGYDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V  +QN   +R+  D +  S+  D  +RT +  ++   +  + K+      
Sbjct: 89  AIQTGQHPAVTTEQNIARYREQLDKIGFSFDWDREVRTCDPGYYKWTQWAFLKMFGSYYC 148



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 44/225 (19%)

Query: 258 ADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS  NV++P  +
Sbjct: 652 VDVNIVRNDILDIDAFRAWMPEYKDAEFILEDGKYVCGWAIE---KMSKSFYNVVNPDYI 708

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E  G D LR + +      +   +D +G+         +G+   + R   +    YD  
Sbjct: 709 VENYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVYKFLRRFWRLF---YDRD 756

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE---VDRYFDAQKP 433
                   ++DE  L    + ++++ E+++N   + +++  +  ++E    ++       
Sbjct: 757 GRLIVTDEKADEKELRTLHKTIKKVSEDIENFSFNTSVSAFMICLNELGECNK------- 809

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                              E+I  L +LL  F P +A +++  L 
Sbjct: 810 ------------------REIIEPLTVLLAPFAPHIAEELWAALG 836


>gi|296129250|ref|YP_003636500.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas flavigena DSM 20109]
 gi|296021065|gb|ADG74301.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Cellulomonas flavigena DSM 20109]
          Length = 886

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 13/261 (4%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           DP  IM  W  +        G+LD+PD   A+ +P DL   G+DI+     +    A L 
Sbjct: 521 DPD-IMDTWATSSLTPQIVCGWLDDPD-LFARTFPMDLRPQGQDIIRTWLFSSVVRAHLE 578

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           S +LP      S   +    +K+SKS GNV+ P+ ++EE G DA+RY+       G D  
Sbjct: 579 SGSLPWKHAAISGWILDPDRKKMSKSKGNVVTPLGLLEEHGSDAVRYW-AASARLGTDAA 637

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +  +  + ++   LA  + N     +S    D    +         D ++L+  + V+++
Sbjct: 638 F--EVGQMKIGRRLAIKVLNASKFVLSFGPADEPVSLDAAAVTQPLDRAMLAGLAEVVEQ 695

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPD-----RASTVLYVTVEV 454
               +      RAL    +      D Y +  K                 ++        
Sbjct: 696 ATAALDAYDHTRALELTETFFWTFCDDYLELVKDRAYGAGASAADVTPETASARAALGLA 755

Query: 455 IRQLAILLQAFVPKLANKIFD 475
           +  L  L    +P    +++ 
Sbjct: 756 LDTLLRLFAPVLPYATEEVWS 776



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ERE+++ I T     +   H+GH +     DV+ARF R+ G +VL+  G D++G    + 
Sbjct: 50  EREQVFSIDTPPPTVSGSLHVGHVFSYTHTDVVARFQRMRGREVLYPMGWDDNGLPTERR 109

Query: 62  AQN 64
            QN
Sbjct: 110 VQN 112


>gi|51473867|ref|YP_067624.1| valyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826287|sp|Q68W50|SYV_RICTY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51460179|gb|AAU04142.1| Valine translase [Rickettsia typhi str. Wilmington]
          Length = 814

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 69/338 (20%), Positives = 118/338 (34%), Gaps = 22/338 (6%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-FDWGI 218
           M  E +   LS         Y   P  I   +R  E    + + +  L +        G 
Sbjct: 385 MRLENWINSLSWDWCISRQRYFGVPFPIWYSKRIGEEGKILYADISQLPVDPLKDLPIGY 444

Query: 219 -KIPDDPQ-YIMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPADLHVIGKDILRFHA 272
            K   DP   +M  W  +  +   +T               K +P DL     +I+R  A
Sbjct: 445 SKEEVDPDLDVMDTWATSSVSPQLSTYGISEDFAINKVRHDKLFPMDLRPQAHEIIRTWA 504

Query: 273 IY--WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            Y    + L    LP    + S   +     K+SKS GNV+ P +++E  G D +RY+  
Sbjct: 505 FYTILKSHLHQNILPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLERYGADVIRYWSA 564

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAFT 384
                G D  Y +D +K      L N + N           ++   K             
Sbjct: 565 NSK-LGADTAYSEDIMKN--GKRLVNKLWNAAKFVSIHFDKLTSEDKKVSLCAIKEKITH 621

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN-- 440
           E D+ I++    +++     +QN     A+            D Y +  K     + N  
Sbjct: 622 EFDQWIINKLVALVKLATNALQNYEYANAIYLTEKFFWSIFCDNYLEISKTRSYDEGNKN 681

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           P    + +  +  V++ L  L   F+P +  +++ IL+
Sbjct: 682 PQGQYSSILTSYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 15/177 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M +     + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  MSKEGIYIVDTPPPTVSGQLHIGHIYSYTQTDFIVRFQRMIGKNIFYPIGFDDNGLPTER 92

Query: 61  AAQNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                   +  V      FR++   + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNMERDEFIKICQEVVQNEEAKFRNLFKQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +  +  KG++Y+      +   D       ++         N      +  ++
Sbjct: 153 SQMSFLDLLHKGEVYRANQPILWDTVDGTALAQADIEDKQKISSMNYIMFKTEQGDK 209


>gi|6319395|ref|NP_009477.1| Ils1p [Saccharomyces cerevisiae S288c]
 gi|135134|sp|P09436|SYIC_YEAST RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3820|emb|CAA30733.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|498991|emb|CAA56034.1| E-1072 protein [Saccharomyces cerevisiae]
 gi|536123|emb|CAA84898.1| ILS1 [Saccharomyces cerevisiae]
 gi|151946322|gb|EDN64544.1| isoleucyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|207347903|gb|EDZ73931.1| YBL076Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273901|gb|EEU08821.1| Ils1p [Saccharomyces cerevisiae JAY291]
 gi|285810261|tpg|DAA07046.1| TPA: Ils1p [Saccharomyces cerevisiae S288c]
 gi|323356233|gb|EGA88037.1| Ils1p [Saccharomyces cerevisiae VL3]
          Length = 1072

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         +  PA+    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYASQHYPFENTEKFDERVPANFISEGLDQTRGWFYTLAVLGTHLFG 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
           ++P    + S   +   G K+SKSL N  DP  V+ + G DALR +L+       +   +
Sbjct: 583 SVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLINSPVLKAESLKF 642

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSR 396
            ++G+K+ V+  L     +        ++   + + D        +    D  IL+    
Sbjct: 643 KEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDNVMDRWILASMQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I E M    ++  + ++++ + E+ + Y    +     +   +     L    + +
Sbjct: 703 LVQFIHEEMGQYKLYTVVPKLLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
                 +  F P L+  I+  L
Sbjct: 763 FTFVRAMAPFTPFLSESIYLRL 784



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 35  KDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGVPIEHI 94

Query: 62  A-----------------QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     +  V   + ++R     L   I +D+  +T     
Sbjct: 95  IDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDWRKTIGRLGRWIDFDNDYKTMYPSF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 155 MESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSNFEAQQNYK 198


>gi|116198093|ref|XP_001224858.1| hypothetical protein CHGG_07202 [Chaetomium globosum CBS 148.51]
 gi|88178481|gb|EAQ85949.1| hypothetical protein CHGG_07202 [Chaetomium globosum CBS 148.51]
          Length = 980

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 106/306 (34%), Gaps = 58/306 (18%)

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPA 277
           +  DP  ++  W  +     +T G+           +P  +   G D L F    +   +
Sbjct: 563 LERDPD-VLDTWFSSGLWPFSTLGWPHKTH-DMQNLFPNSVLESGWDTLFFWIARMIMLS 620

Query: 278 FLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVI------------------- 317
             L+  +P  ++V+ H  I   +G K+SKSLGNV+DP+ V+                   
Sbjct: 621 LKLTGQVPF-REVYCHSLIRDAQGRKMSKSLGNVLDPVAVMEGISLEALQESLKTGNLDE 679

Query: 318 ------------------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
                              E G DALR+ L+     G D  +D   +             
Sbjct: 680 SEYKVASKNQKLSFPNGIPECGADALRFSLISYTTGGGDVNFDIKVMAG------YRRFC 733

Query: 360 NLVSRSVSMILKDYDGMIPTPGAF------TESDESILSVCSRVLQEIRENMQNQLIHRA 413
           N + ++   +L  +      P         + S+  +L   +   + ++E ++ +   R+
Sbjct: 734 NKIYQATKYVLGKFPASYVPPSKLAKTGNESLSERWVLHRLNVAARAVQEALEKREFSRS 793

Query: 414 LAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLAN 471
              V         D + +  K      ++  +AS +       +     L   F+P L+ 
Sbjct: 794 AQAVYRYWYDDVCDVFIETSKAVLQDGSDAAKASAID-TLYAAVEGGLTLTHPFMPFLSE 852

Query: 472 KIFDIL 477
           +++  L
Sbjct: 853 ELWQRL 858



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 12  AIAYPN--AQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGV 67
            +  PN     H GHA    + D+L R+HR+ G   L+  G D          +    
Sbjct: 119 PLPPPNVTGALHCGHALGTALEDLLIRWHRMRGFTTLYIPGCDHASISTQSVVEKMLW 176


>gi|284174950|ref|ZP_06388919.1| isoleucine-tRNA synthetase (ileS) [Sulfolobus solfataricus 98/2]
          Length = 986

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 129/359 (35%), Gaps = 15/359 (4%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                     +     ++        F  +     +     +        E  +  I  V
Sbjct: 371 WIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICERCNNVMVVGSKEELESIAIDPV 430

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            + L    +               +   +  VW D+   +  + G        +    P 
Sbjct: 431 PNDLHRPWIDNVRVKCNKCGGVAKRIPDVADVWFDSGVAFFASLGKDWQEKWKELG--PV 488

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL + G D L   F ++     +L    P    +     +  +G ++ KSLGN ++P  V
Sbjct: 489 DLVLEGHDQLRGWFFSLLRSGLILLDRAPYTSVLVHGFMLDEQGREMHKSLGNYVEPSVV 548

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR +L+R     +D  +    L +    DL       V  S+ M L +++  
Sbjct: 549 VEKYGRDILRLWLLRNTT-WEDAKFSWKAL-ELTKRDLQIIWNTFVFASMYMNLDNFEPD 606

Query: 377 IPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDA 430
             T           D  ILS  + +L+++ E+M++  +H     +I+  + +V R Y   
Sbjct: 607 KYTLDDIIKYAKIEDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRL 666

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
            +     + N      + Y+   +++Q  IL    +P ++ KI+    V A E+   +S
Sbjct: 667 IRKRAWIEANTQDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 725



 Score = 47.1 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 20/137 (14%)

Query: 30  IADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------------------GVTTKV 71
           I D + R+ R+ G  V    G D HG  I  A +                        K 
Sbjct: 2   IKDCILRYQRVLGKRVHDQPGYDTHGLPIEVATEKLLGISNKQEIIDKIGVETFINKCKE 61

Query: 72  FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
           F   N+         + +   ++    T +  +  +   + KK  +KG + KG     + 
Sbjct: 62  FALSNADKMTQNFKNVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTAVLHWC 121

Query: 130 LRDEAYYNDDEVYKGAD 146
            R E   +D EV +  D
Sbjct: 122 PRCETTLSDYEVSEYRD 138


>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 921

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 145/432 (33%), Gaps = 38/432 (8%)

Query: 90  SYDDFIRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           SY    RT +          +   K   +             +  +   YN         
Sbjct: 392 SYPHDWRTKKPTIFRATAQWFASIKDFREDLLKAVEKTKWVPTWGETRLYNMVRDRGDWC 451

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKD 206
                A   P+     E     ++    + +S         +  ER  + +       + 
Sbjct: 452 ISRQRAWGVPIPVFYAENDEPIITDETIEHVSNLFREHGSNVWFEREAKDLLPEGFTHEG 511

Query: 207 LSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKD 266
               R T             IM VW D+ +++             +    PADL++ G D
Sbjct: 512 SPNGRFT---------KETDIMDVWFDSGSSHQAVLEER------EDLQRPADLYLEGSD 556

Query: 267 IL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDA 324
                F++    +  ++   P    +     +  +G K+SKSLGNV+ P +V++++G D 
Sbjct: 557 QYRGWFNSSLSTSVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVVIPEKVMKQLGADI 616

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           LR ++        D     + LK+         +   +  +   +L +     PT  A  
Sbjct: 617 LRLWVASVDYQA-DVRVSDNILKQ------VAEVYRKIRNTFRFLLGNLADFNPTTDAVA 669

Query: 383 ---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP-WEL 436
                E D  +L   ++++ +++++  +         V +   +     Y D  K    +
Sbjct: 670 VEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYHAVHNFCTIDMSSFYLDFAKDVLYI 729

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLD--QRL 493
           +  N     ++  V  E +  L  L+   +   A++++  +  V +E+     +   Q +
Sbjct: 730 EAENNVERRSIQTVLYETLLSLTKLVSPILSHTADEVWVHIPNVTEESVQLVDMPEVQEI 789

Query: 494 KPGFMLHKTFDP 505
           +    L + +D 
Sbjct: 790 EGADQLVEKWDA 801



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A
Sbjct: 45  EGRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     R+    L +   +D+   T + ++    
Sbjct: 105 LTKNKKVNRKEMTVAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++  ++ KG IYKG    ++S   E+   + E+  
Sbjct: 165 IKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEIEY 201


>gi|240114919|ref|ZP_04728981.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600576|ref|ZP_06134743.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584707|gb|EEZ49383.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 929

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 108/321 (33%), Gaps = 30/321 (9%)

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G   L  S        +  D     M VW D+ + + +           +   WPADL++
Sbjct: 509 GWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVK------QREELEWPADLYL 562

Query: 263 IGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE 319
            G D     F +        S      K++ +HGF++   G K+SKS+GNV+ P EV  E
Sbjct: 563 EGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNE 622

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D LR +            Y  +    +            +  ++S +  +     P 
Sbjct: 623 FGADILRLWAAS-------TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPI 675

Query: 380 PGAFT-----ESDESILSVCSRVLQEIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQ 431
             A       E D   L +  R+ + +          H A+  ++S  SE     Y D  
Sbjct: 676 EDAVQQADMVEIDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDIL 735

Query: 432 KPWELK-KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K      K +     +       + R L +L+   +     + +DI+   +E+       
Sbjct: 736 KDRLYTTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTW 795

Query: 491 QRL-----KPGFMLHKTFDPI 506
                   K    L K +  I
Sbjct: 796 HEFPAINEKAEAELVKKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|163857126|ref|YP_001631424.1| isoleucyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|254782369|sp|A9IRC2|SYI_BORPD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163260854|emb|CAP43156.1| ileS [Bordetella petrii]
          Length = 953

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 16/261 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNP---DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + VW D+ T + T  G  D            WPADL++ G D     FH+      +L  
Sbjct: 544 LDVWFDSGTTHATVLGGKDQALGGSHGAELAWPADLYLEGSDQHRGWFHSSLLTGCMLYG 603

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  +G K+SKS+GNVI P +V + +G + LR ++      G+     
Sbjct: 604 QPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGE-LSIS 662

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
            + LK+ V  +    I N + R +   + D+D +      G   E D   L++ +++  E
Sbjct: 663 DEILKRVV--EGYRRIRNTL-RFLLANVADFDAVSQAVPYGELFEIDRYALTMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVIR 456
           +  + +    H A++++ +  SE     Y D  K   L  T     +  +     +++ +
Sbjct: 720 VLAHYERYDFHPAVSRLQTFCSEDLGAFYLDILKD-RLYTTAAGSLARRSAQTALLDITQ 778

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  L+   +   A + + +L
Sbjct: 779 ALLKLMAPILSFTAEEAWQVL 799



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   ++ D++ +   + G D  +  G D HG  I   
Sbjct: 45  RGRPRFVLHDGPPYANGDIHIGHAVNKVLKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ 104

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     R     L +   +D    T    +       
Sbjct: 105 IEKKFGKHLPVTEVQAKARAYALEQIDRQRKDFKRLGVLGEWDRPYLTMNFSNEANEIRA 164

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              I  KG +++G     +     +   + EV  
Sbjct: 165 LGGILQKGYVFRGLKPVNWCFDCGSALAEAEVEY 198


>gi|198282848|ref|YP_002219169.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|198247369|gb|ACH82962.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 937

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 103/304 (33%), Gaps = 27/304 (8%)

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G         I+ VW D+   +                  PADL++ G D     F + 
Sbjct: 523 CGHDHFHKVTDILDVWFDSGCTHAFVLEQRPELHS------PADLYLEGSDQHRGWFQSS 576

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +       P    +     +  +G K+SKS+GNVI P  +I+  G D LR ++  E 
Sbjct: 577 LLESVASRGRAPYRAVLTHGFTVDGEGRKMSKSVGNVIAPQTIIDRYGADILRLWVASED 636

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDE 388
               +       L++  ++         +  +   +L +     P   A       E D 
Sbjct: 637 Y-RSEIPISDTILQQLGDS------YRRIRNTARYMLGNTHDFNPATDALPTADLLEMDR 689

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA-S 445
            +L+  + + +EIR         R   ++    S      Y D  K          RA  
Sbjct: 690 WMLARTALLQEEIRAAYSEYQFLRVQQRLHHFCSVELGGLYLDVLKDRLYTTPAASRARR 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           +   V  +++  + + +   +   A +I+D +     NR F S+     P   L    + 
Sbjct: 750 SAQTVLWQILEAMVVWMAPILSFTAEEIWDGMG----NRPFSSVFFAQYPEIPLPADSEV 805

Query: 506 IFPR 509
           +  R
Sbjct: 806 LMGR 809



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N + HIGHA   ++ D++ +    +G  V +  G D HG  I    + 
Sbjct: 48  PAFILHDGPPYANGKIHIGHAVNKVLKDIVNKSKLSEGFRVPYVPGWDCHGLPIEIQVEK 107

Query: 65  AGVTTKV 71
                  
Sbjct: 108 ELGRPDE 114


>gi|166713092|ref|ZP_02244299.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 943

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 660 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVVLEDMVLLDRWIVHRAHELQEKIV 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 717 AAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAEDARGRRSAQSAMYHVAEAFV 776

Query: 460 ILLQAFVPKLANKIFDILFVAD-ENRCFQSLDQRLKP 495
             +   +   A++++  L      N  F +    L P
Sbjct: 777 RWIAPVLSFTADELWGYLPGKHVGNVLFATWYGGLAP 813



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 48  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 107

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T + R      
Sbjct: 108 EKKYGKVGVKLDAAEFRQKCREYAIEQIDLQRRDFKRLGVIGDWDNPYKTLDFRFEANEI 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 168 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|156325731|ref|XP_001618581.1| hypothetical protein NEMVEDRAFT_v1g3316 [Nematostella vectensis]
 gi|156199416|gb|EDO26481.1| predicted protein [Nematostella vectensis]
          Length = 278

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 49/248 (19%)

Query: 288 KKVFSHGFILH-KGEKISKSLGNVIDPIEVIEE--------------------------- 319
           K V+ HG +   +G+K+SKS GNV+DP+++++                            
Sbjct: 2   KTVYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGITLDALLEKRTTGLMQPKLAEKIAKQT 61

Query: 320 ----------VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
                      G DALR+  +   + G+D  +D   ++     +  N I N  +  +   
Sbjct: 62  KAEFPEGIAAYGTDALRFTNLALASTGRDIKFDMGRVEG--YRNFCNKIWNAANFVIENT 119

Query: 370 LKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
                G+       +  D  I+S   R   E+   +       A   +   + +     Y
Sbjct: 120 DGQDTGINGEEVELSSVDRWIISALQRTEAEVTRQLDAFRFDLAAHALYEFIWDEYCAWY 179

Query: 428 FDAQKPWELKKTNP--DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL----FVAD 481
            +  KP  L   N   +R        + V+     L   F+P +  +I+  +     V+ 
Sbjct: 180 LELVKP-VLWDENASIERQRGTRRTLIRVLEVALRLAHPFMPFITEEIWQRIKSQAGVSG 238

Query: 482 ENRCFQSL 489
           +    Q+ 
Sbjct: 239 DTIMLQAW 246


>gi|190408897|gb|EDV12162.1| isoleucine-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
          Length = 1072

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         +  PA+    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYASQHYPFENTEKFDERVPANFISEGLDQTRGWFYTLAVLGTHLFG 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
           ++P    + S   +   G K+SKSL N  DP  V+ + G DALR +L+       +   +
Sbjct: 583 SVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLINSPVLKAESLKF 642

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSR 396
            ++G+K+ V+  L     +        ++   + + D        +    D  IL+    
Sbjct: 643 KEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDNVMDRWILASMQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I E M    ++  + ++++ + E+ + Y    +     +   +     L    + +
Sbjct: 703 LVQFIHEEMGQYKLYTVVPKLLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
                 +  F P L+  I+  L
Sbjct: 763 FTFVRAMAPFTPFLSESIYLRL 784



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 35  KDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGVPIEHI 94

Query: 62  A-----------------QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     +  V   + ++R     L   I +D+  +T     
Sbjct: 95  IDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDWRKTIGRLGRWIDFDNDYKTMYPSF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 155 MESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSNFEAQQNYK 198


>gi|88855105|ref|ZP_01129770.1| isoleucyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815633|gb|EAR25490.1| isoleucyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 1096

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/396 (13%), Positives = 123/396 (31%), Gaps = 15/396 (3%)

Query: 90  SYDDFIRTTEKRHHDTCRILW----KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           SY    R      +      +    +     G++ +       ++++  +       +  
Sbjct: 427 SYPHCWRCRNPLIYKAVSSWFVKVPEFRDRMGELNQEINWVPENVKEGQFGKWVGNARDW 486

Query: 146 DGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLK 205
                    +P+   + +   F                    LP+    E     +  + 
Sbjct: 487 SISRNRYWGSPIPIWKSDNPDF--PRMDVYGSLAEIEADFGRLPLNHEGEP-DLHRPFID 543

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV--I 263
           +L+        G       + ++ VW D+ +       Y            PAD  V  I
Sbjct: 544 ELTRPNPDDPSGQSTMRRIEDVLDVWFDSGSMPFAQVHYPFENQEWFDTHSPADFIVEYI 603

Query: 264 GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           G+    F+ ++  +  L         +     + + G+K+SKSL N  +  EV E  G D
Sbjct: 604 GQTRGWFYTLHTLSTALFDRPAFSNVISHGIVLGNDGQKMSKSLRNYPNVSEVFERDGAD 663

Query: 324 ALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA 382
           A+R+FL+        +    ++G++  V   L          ++     D         +
Sbjct: 664 AMRWFLMSSSVIRGGNLMVTEEGIRDGVRQLLLPLWSTYYFFTLYTNAADNYEAQWRTDS 723

Query: 383 FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNP 441
               D  +L+    +++++   +       A A++        + Y    +       + 
Sbjct: 724 TNVLDRYLLAKTRELIEDVTAELDALDSPTAAAKLRDFADVLTNWYVRRSRDRFWLGDDT 783

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           D           V+  +A +    +P +A +++  L
Sbjct: 784 D----AFDTLFTVLETVARVAAPLIPLVAEEMWRGL 815



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 23/164 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA------------- 59
             + N  PH GH       D+  RF  + G  V    G D HG                 
Sbjct: 54  PPFANGLPHYGHLLTGYAKDLFPRFQTMRGKQVQRRFGWDTHGLPAELEAMRQLGITEKS 113

Query: 60  --------KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                   K    A  +   +  +       MA  +D   D   +T +    ++    +K
Sbjct: 114 QIEEMGIDKFNAAARESVLKYTGEWQDYVTRMARWVDFENDY--KTLDVNFMESVIWAFK 171

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           ++ +K   Y+G     Y   DE   ++ E+    D         
Sbjct: 172 QLHEKNLAYEGFRVLPYCWNDETPLSNHELRMDDDVYKMRQDQT 215


>gi|323349854|gb|EGA84067.1| Ils1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1072

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         +  PA+    G D     F+ +      L  
Sbjct: 523 EEVFDCWFESGSMPYASQHYPFENTEKFDERVPANFISEGLDQTRGWFYTLAVLGTHLFG 582

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
           ++P    + S   +   G K+SKSL N  DP  V+ + G DALR +L+       +   +
Sbjct: 583 SVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLINSPVLKAESLKF 642

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSR 396
            ++G+K+ V+  L     +        ++   + + D        +    D  IL+    
Sbjct: 643 KEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDNVMDRWILASMQS 702

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I E M    ++  + ++++ + E+ + Y    +     +   +     L    + +
Sbjct: 703 LVQFIHEEMGQYKLYTVVPKLLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDAL 762

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
                 +  F P L+  I+  L
Sbjct: 763 FTFVRAMAPFTPFLSESIYLRL 784



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 35  KDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGVPIEHI 94

Query: 62  A-----------------QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     +  V   + ++R     L   I +D+  +T     
Sbjct: 95  IDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDWRKTIGRLGRWIDFDNDYKTMYPSF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 155 MESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSNFEAQQNYK 198


>gi|315613567|ref|ZP_07888474.1| isoleucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314258|gb|EFU62303.1| isoleucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 930

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 108/283 (38%), Gaps = 24/283 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
             +++ ++  LL   +P  A +I+  L F A+E      L + 
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAEEFVQLSELPEA 787



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCRDYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|190890541|ref|YP_001977083.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|190695820|gb|ACE89905.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 968

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 127/380 (33%), Gaps = 33/380 (8%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           +          D          ++ D  +        G +      +  P      +   
Sbjct: 455 QWFVYMDKTLPDGTTLRTRALTAIDDTRFVP----AAGQNRLRAMIEQRP------DWVL 504

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP-- 224
            R  A+   +  + + H   +        ++    +   D   +    +  +    DP  
Sbjct: 505 SRQRAWGVPICVFVDEHGAVLQDEAVNARILEAFDAEGADAWFAEGAKERFLGNEHDPAK 564

Query: 225 ----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPADL++ G D     FH+    + 
Sbjct: 565 WSQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFHSSLLESA 618

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++       D
Sbjct: 619 ATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYA-DD 677

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    I       E ++ +L   + + 
Sbjct: 678 LRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEEI-ALADLPELEQLMLHRLAELD 734

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           Q +REN       +    +I   + E+   YFD +K   L    P   R    L+V  ++
Sbjct: 735 QLVRENYDAFDFKKIARALIDFANVELSAFYFDVRKD-ALYCDAPSSLRRRASLHVIRQI 793

Query: 455 IRQLAILLQAFVPKLANKIF 474
              +   L   +P    + +
Sbjct: 794 FDCMVTWLAPMLPFTTEEAW 813



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 11/105 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKI 112

Query: 63  QNAGV-----------TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +                    ++            + +  D+F R
Sbjct: 113 EEENYRAKGKAKPDLKEPAAMIEFRRECRAYAEKWIKVQGDEFQR 157


>gi|126666689|ref|ZP_01737666.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628734|gb|EAZ99354.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 939

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 133/399 (33%), Gaps = 27/399 (6%)

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
             +    IY+     + S+  E    D                N ++ M  +   + +S 
Sbjct: 410 WRTKTPLIYRATPQWFISMEKENLRADALEAIKGVRWVPTWGQNRIEAMVRQSPDWCVSR 469

Query: 172 YQDK--------LLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            +                 HP     IE+  + I            +R+         + 
Sbjct: 470 QRTWGVPITLFIHKETQNLHPNTQSLIEKVAQAIEIDGIDAWYDLDAREILGDDADHYEK 529

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
               + VW D+   +             +   +PADL++ G D     F +    +  ++
Sbjct: 530 VLDTLDVWFDSGVTH-----ESVLRVREELSQFPADLYLEGSDQHRGWFQSSLKTSIAIN 584

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
              P  + +     +  KG K+SKSLGNVI P EV  ++G D LR ++      G+    
Sbjct: 585 GVAPYKQVLTHGFTVDGKGYKMSKSLGNVIAPQEVTNDLGADILRLWVAATDYSGEMTV- 643

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQ 399
            KD L  R +AD    I N   R +   L  +D    T  P      D  ++    ++  
Sbjct: 644 SKDIL--RQSADGYRRIRNTA-RFLMSNLTGFDPTKHTVAPADMMALDRWMVDRALQLQN 700

Query: 400 EIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRAS--TVLYVTVEVI 455
           EI E+ +N    R   +V +         Y D  K      T  D  +  +       V 
Sbjct: 701 EIHEDYENYAFLRIYQKVYNFCESILGGFYLDIIKD-RQYTTQADSLARRSCQTALYHVA 759

Query: 456 RQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRL 493
             L   +   +   A++I+  L     +   +++  Q L
Sbjct: 760 EALVRWIAPILSFTADEIWQHLPGERGDTVFYETWYQGL 798



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I    
Sbjct: 47  GRNKFILHDGPPYANGSIHIGHAVNKILKDIIVKSRGFMGFDAPYVPGWDCHGLPIEHKV 106

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     +     L +   +D    T + +      
Sbjct: 107 EQKIGKAGVKVDYKTFRQACRDYATKQIAGQKADFIRLGVMGEWDKPYLTMDPKVEAGIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               KI DKG + +G    ++S+  ++   + EV  
Sbjct: 167 RALGKIVDKGHLVRGYKPVYWSVVGQSALAEAEVEY 202


>gi|290559236|gb|EFD92582.1| tRNA synthetase valyl/leucyl anticodon-binding [Candidatus
           Parvarchaeum acidophilus ARMAN-5]
          Length = 495

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 146/414 (35%), Gaps = 22/414 (5%)

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
               + K         +          DE Y    ++           +  P Q  +   
Sbjct: 50  AVDKIEKIKHRTPMCDRSKIPIEIIPMDEYYVKVTDIRDRLIELANELEIIPEQHKQILI 109

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL------SRKTFDWGI 218
            + ++S         Y      +       E +   +              S+ +   G 
Sbjct: 110 NWLKVSNDWPISRRRYYGTEIPLWYCNNCGEPLVPEEGKYYIPWKELPPEGSKCSKCNGD 169

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WP 276
           K   D +     W+D+  + L  T YL + +   +K +P  L   G DI+R    Y    
Sbjct: 170 KFTGDTR-TFDTWMDSSVSALYVTKYLYDKEF-FSKTYPMTLRPQGIDIVRTWLNYSILR 227

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
            + L+  LP          +   GEK+SKS GN +DP  VIE+ G DA R++ V E   G
Sbjct: 228 NYQLTEKLPWKTAWIDGMGLDEHGEKMSKSKGNGVDPTIVIEKYGADAFRFWAVSEAMPG 287

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
            +  + +  L+    +     + N+       ++K +      P   TESD  I+    +
Sbjct: 288 SNFMFSESRLQGS--SKFLTKLWNVAR-----LIKQFPAQEDRP-TITESDRWIIEYTKK 339

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEVDR--YFDAQKPWELKKT-NPDRASTVLYVTVE 453
           +  E  +  +    +    ++   +  V    Y +  K     +  + +   + LY    
Sbjct: 340 ITNECVDAYKKLNPYLPANKIREFIWNVFAPHYLELIKARAYGEGFSEEEKESALYTLNS 399

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
             ++L +LL    P + + I+  L+ + E+  +Q++    +    + +T + + 
Sbjct: 400 TFKELLLLLAPITPFITDTIWRELY-SKESIHYQNITNFPEEDNTILETGEKLM 452


>gi|238918622|ref|YP_002932136.1| isoleucyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511503|sp|C5B7M4|SYI_EDWI9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|238868190|gb|ACR67901.1| isoleucyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 948

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 115/355 (32%), Gaps = 37/355 (10%)

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTF 214
           W+   G     S   ++          + +P+     +  + +    + L ++   R   
Sbjct: 454 WIPAWGKARIESMVANRPDWCISRQRTWGVPMAMLVHKETQELHPRTTELMEMVAKRVE- 512

Query: 215 DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
             GI+   D                    + VW D+ +   +                P 
Sbjct: 513 QAGIQAWWDLDIRDLLGDEADQYEKVPDTLDVWFDSGSTSYSVVD----ARPEFNGHSP- 567

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D+++ G D     F +    +  +    P  + +     +  +G K+SKS+GNV+ P +V
Sbjct: 568 DMYLEGSDQHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSVGNVVSPQQV 627

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           + ++G D LR ++       +    D+     + +AD    I N   R +   L  +D  
Sbjct: 628 MNKLGGDILRLWVASTDYTSEMAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPC 683

Query: 377 --IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
             +  P      D   +    +   EI    +N   H  + +++   S      Y D  K
Sbjct: 684 KDMVKPEDMVVLDRWAVGCAKQAQDEIIAAYENYDFHEVVQRLMQFCSVEMGSFYLDIIK 743

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +   K +     +       +   L   +   +   A++++  L        F
Sbjct: 744 DRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGDRAQFVF 798



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 48/166 (28%), Gaps = 16/166 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  QGKKSFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGLSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +            ++  FR+                        +  + ++   GD   
Sbjct: 106 VEQLIGKPGE--KYSAAEFREQCRAY-----------AAEQVAGQKADFIRLGVLGDWEH 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
              +  Y            +    D  +      PV W  + G   
Sbjct: 153 PYLTMDYGTEANIIRALARI---VDNGHLMKGAKPVHWCPDCGSSL 195


>gi|160872510|ref|ZP_02062642.1| isoleucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121309|gb|EDP46647.1| isoleucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 948

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/286 (20%), Positives = 102/286 (35%), Gaps = 20/286 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
            + VW D+  ++                 +PA L + G D     F +    +  +++  
Sbjct: 530 CLDVWFDSGVSHYAVLM------KDSQLAYPASLCLEGSDQYRGWFQSSLLTSIAMNSQA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  KG K+SKSLGNVI P +VI+ +G D LR ++       +    D+ 
Sbjct: 584 PYKSVLTHGFTVDEKGHKMSKSLGNVIAPEKVIQRLGADILRLWISSTDYRKEMVVSDE- 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
               +   D    I N +   ++ +          P      D  IL   +R+ QEI   
Sbjct: 643 --ILKHTVDAYRRIRNTIRFLLANLHDFDSTDCIPPSTLLSLDMWILERANRLQQEIINA 700

Query: 405 MQNQLIHRALAQVISLV--SEVDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAI 460
            +    H    +V           Y D  K   + L+K +  R  +       +   +  
Sbjct: 701 YEGFQFHLIYQKVQHFCINDLGGFYLDIIKDRQYTLQKNSVAR-RSAQTALFYIAEAMVR 759

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPI 506
            L   +   A +I+  L    E   F  L++     F L K  DP+
Sbjct: 760 WLAPILSFTAEEIWCYLPGKREKSVF--LNEWYPLSFSLSK--DPL 801



 Score = 67.1 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     Y N   H+GHA   I+ D++ +     G D  F  G D HG  I   
Sbjct: 47  RGKAQYILHDGPPYANGHIHMGHAVNKILKDIVLKSKTFSGFDAPFVPGWDCHGLPIELN 106

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
            +                 T + +  Q     R+    L +  D      T + R     
Sbjct: 107 VEKKIGQVGAQLTAKTFRQTCREYAAQQVTIQREEFKRLGVLGDWEHPYLTMDFRFEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI  +G + +G     + +   +   + EV  
Sbjct: 167 IRALGKIISRGHLQQGFKPVHWCVNCRSALAEAEVEY 203


>gi|94267665|ref|ZP_01290951.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451903|gb|EAT02631.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 946

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 101/289 (34%), Gaps = 15/289 (5%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           +    L D          G       + I+ VW D+  +      +    +       PA
Sbjct: 512 WFARPLADFIGPDARCSCGATDFAKEEDILDVWFDSGVS------FAAVLEQRDELTSPA 565

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL++ G D     F +    +       P    +     +  +G+K+SKS+GNVI P ++
Sbjct: 566 DLYLEGSDQHRGWFQSSLLASVGTRGAAPYKAVLTHGFVVDGQGKKMSKSVGNVIAPDKI 625

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I++ G + LR +   E     D    ++ L  R  AD      N +   +  +       
Sbjct: 626 IKQHGAEILRLWAASEDY-RDDIRISENIL--RQLADAYRKTRNTIRFMLGNLHDFEPAR 682

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP 433
              P     E D  IL+      Q+ +E+      H+   Q+ +   VS    Y D  K 
Sbjct: 683 HRRPAEGMAELDRWILARFELFRQKSQESYDKFEFHQFYHQLYNFCTVSLSALYLDIVKD 742

Query: 434 WELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                   D R      V  E+   L  LL   +  LA + ++ L   D
Sbjct: 743 RLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEAWEHLPADD 791



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 16/155 (10%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             LYI      Y N   H+GHA   I+ D++ +  R+ G    +  G D HG  I     
Sbjct: 47  RPLYILHDGPPYANGHLHMGHALNKILKDIILKAKRMSGYHCPYVPGWDCHGLPIELNVD 106

Query: 64  NAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
               + K              +  +     R+    L +   +     T +  +      
Sbjct: 107 KELGSKKAEVDKLAFRETCRRYAAKWIAIQREEFARLGVLADWQQPYLTIDYSYEAAIAR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      G I +      +         + EV  
Sbjct: 167 EFNNFLLNGAISRSRKPVHWCASCTTALAEAEVEY 201


>gi|85707107|ref|ZP_01038195.1| isoleucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85668393|gb|EAQ23266.1| isoleucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 994

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 99/277 (35%), Gaps = 14/277 (5%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
                ++  F  GI  PDD + +   + VW D+ + +        +          ADL+
Sbjct: 576 WYKDGAKARFLSGIVNPDDWRKVDDILDVWFDSGSTHAFVLRDRADGSEDGL----ADLY 631

Query: 262 VIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + G D     FH+    +       P    +     +  KG K+SKSLGN + P EV+++
Sbjct: 632 LEGTDQHRGWFHSSMLQSCGTRGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEEVVKQ 691

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
            G D LR ++ +      D     + LK    AD    + N +   +  +    +     
Sbjct: 692 YGADILRLWVAQADY-TADLRIGPEILKGV--ADGYRRLRNTLRFMLGALAPFSEADRVD 748

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK 437
           P    E +  +L   + +  ++++  +         Q+ +         YFD +K     
Sbjct: 749 PADMPELERWVLHRLAELDHKVKKGYETYDFQGVFQQIFNFCTLDLSAFYFDIRKDALYC 808

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +  R      V   +  +L   L   +     +++
Sbjct: 809 DGDTARRRAARTVLDLLFHRLTTWLAPVLVFTMEEVW 845



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 18/162 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGHA   I+ D++ R  ++ G D  +  G D HG  I    
Sbjct: 54  GRAPFTLHDGPPYANGHLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPIEWKI 113

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHD 104
           +                      + F +      R+    L I+  +D    T + R   
Sbjct: 114 EEQYRAKGLDKDKVDVVDFRQECRKFAEGWIDIQREEFKRLGITGCWDRPYLTMDFRAER 173

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
                ++K    G +Y+G     +S  ++    + EV     
Sbjct: 174 IIAEEFQKFLMTGVLYQGSKPVMWSPVEKTALAEAEVEYHDK 215


>gi|291457395|ref|ZP_06596785.1| isoleucine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381230|gb|EFE88748.1| isoleucine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 1102

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 105/300 (35%), Gaps = 22/300 (7%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++  +  + +L+        G         ++  W ++ +       Y         + 
Sbjct: 541 NVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQH 600

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD  V  IG+    F+ ++  A  L  + P  K V  HG +L   G+K+SK L N  D
Sbjct: 601 FPADYIVEYIGQTRGWFYLLHVMATALF-DRPAFKNVICHGIVLGSDGQKMSKHLRNYPD 659

Query: 313 PIEVIEEVGVDALRYFLVREIACG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +     +G++  V   +     +    ++     
Sbjct: 660 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAA 719

Query: 372 D----YDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           +    +D             + D  +L+   R+++ + +++    I  A   V   +   
Sbjct: 720 NGGAGFDARQLRADEVAGLPQMDRYLLARTRRLVERVEKSLNEFAISDACDAVSDFIDVL 779

Query: 424 VDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y      + W          +T       V+     +L    P  A  ++  L   +
Sbjct: 780 TNWYIRNTRDRFWN-------EDATAFNTLYTVLEAFMRVLAPLAPMEAESVWRGLTGGE 832



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 64  PPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVD 123

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +        A  +D  ++   +T    + ++    +K
Sbjct: 124 QIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVD--FEHGYKTLNIPYMESVMWAFK 181

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ DKG  Y+G     Y  +D+   +  E+   AD
Sbjct: 182 QLYDKGLAYQGYRVLPYCPKDQTPLSAHELRMDAD 216


>gi|15835193|ref|NP_296952.1| valyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285365|ref|ZP_06194759.1| valyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289381|ref|ZP_06195683.1| valyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336762|ref|ZP_07224964.1| valyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|12585352|sp|Q9PK91|SYV_CHLMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|7190615|gb|AAF39411.1| valyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 939

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 114/365 (31%), Gaps = 52/365 (14%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P +++     +             +  H   +   +   E +           +++    
Sbjct: 387 PPEFIRNYLTWVNNLKDWCISRQLWWGHRIPVWHNKHDEEYVICFDGDGVPEEVAQDPES 446

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AI 273
           W      DP  ++  W  +    LT  G+ +     + KF+P  + V G DIL F    +
Sbjct: 447 W----YQDPD-VLDTWFSSGLWPLTCFGWPEESADLR-KFYPTSVLVTGHDILFFWVTRM 500

Query: 274 YWPAFLLSANLPLPKKVFSH-----------------------------------GFILH 298
                 +    P    VF H                                     ++ 
Sbjct: 501 VLMCSAMVDTKPFAD-VFLHGLIFGKSYKQYDDNGEWTYVSGDQKREYDKGKALPKNVVA 559

Query: 299 KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGI 358
           K EK+SKS GNVIDPIE+I+  G DA+R+ L      G+    D    ++  N    N +
Sbjct: 560 KWEKLSKSKGNVIDPIEMIDMYGADAVRFTLCSCANRGEQIDLDYRLFEEYKN--FVNKL 617

Query: 359 GNLVSRSVSMILKDYDG---MIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALA 415
            N        I +                  D  IL   + +L  I  +       +  A
Sbjct: 618 WNGARFIFGHISELTSRDLEEGVNKDLLGLEDFYILDRFNELLALIDSHYNCYSFDKIAA 677

Query: 416 QVISLV--SEVDRYFDAQKPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANK 472
                        Y +  KP    K  N ++ +T   +   ++  +  +L   VP +   
Sbjct: 678 LAYDFFKNDLCSTYLEIIKPTLFGKQGNDEQRATKRKLLATLLVNILGVLHPIVPYITET 737

Query: 473 IFDIL 477
           +F  +
Sbjct: 738 LFQKI 742



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 23/182 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + D+L R+ R+ G +V +  GTD  G      
Sbjct: 35  SKKPAYSIVMPPPNVTGILHMGHALVNTLQDMLIRYKRMKGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNAGV-----------------TTKVFVDQNSRNFRDMADVLDISYD----DFIRTTEK 100
            +                         + +++          L  S D     F  T + 
Sbjct: 95  VERHLRSSLGKRRTDFSREEFLKHVWEWKEKSQNVILSQLRQLGCSCDWSRQRF--TMDP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWM 160
             +   +  +K + DKG IY+G Y   +    +    DDEV       +      PV   
Sbjct: 153 EANRAVKKAFKVLFDKGVIYRGYYLVNWDPILQTALADDEVEYEEREGWLYYIRYPVVNS 212

Query: 161 EE 162
           EE
Sbjct: 213 EE 214


>gi|258647300|ref|ZP_05734769.1| leucine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852817|gb|EEX72686.1| leucine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 945

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K++ K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  KDKPKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V  ++N   +R+  D +  S+D    +RT +  ++   +   +K+     
Sbjct: 88  YAIQTGQHPAVTTERNIARYREQLDRIGFSFDWSREVRTCDPDYYHWTQWAVRKMFLSYY 147

Query: 119 IYK 121
             K
Sbjct: 148 DTK 150



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 94/238 (39%), Gaps = 39/238 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P ++
Sbjct: 677 VDVNIVANDVLDVEAFKAWRPEYSTAEFILEDGKYICGWAVE---KMSKSMFNVVNPDDI 733

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ G D LR + +      +   +D +G+         +G    + R  ++  +  D  
Sbjct: 734 VDKYGADTLRLYEMFLGPINQSKPWDSNGV---------DGCARFLRRFWNLFFEGEDLR 784

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +    A  E+    L    ++L+++  +++    + ++   +  V+E             
Sbjct: 785 VTDEKATKEN----LKSLHKLLKKVTTDIEEFAYNTSIPAFMIAVNE------------- 827

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQR 492
                           EV+  + I L  F P +A +++  L   +      + + D++
Sbjct: 828 -------LMQQKCRCREVLEPMVIALAPFAPYIAEELWHKLGHGESVHKAAWPAFDEQ 878


>gi|33864825|ref|NP_896384.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81575298|sp|Q7U9G9|SYI_SYNPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33632348|emb|CAE06804.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 974

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 77/476 (16%), Positives = 143/476 (30%), Gaps = 60/476 (12%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAA--------QNAGVTTKVFVDQNSRNFRDMADVLD 88
           FH      +      DE G   A+A         ++A       ++Q     +  A    
Sbjct: 367 FHTGQKHGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPGIIEALEQAGALLKQEAYSHR 426

Query: 89  ISYDDFIRTTEKRHHDTCRILWKKISDK-GDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
             YD   RT +          +  +     D         ++        +  V +  D 
Sbjct: 427 YPYDW--RTKKPTIFRATEQWFASVEGFRQDALDAIDQVQWTPASGRNRIEAMVKERGDW 484

Query: 148 Q----YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSG 203
                       PV +    G     +     + +   SH   +             ++ 
Sbjct: 485 CISRQRTWGVPIPVFYHHSNGEVLLNADTLSHIETLIASHGADV--------WWEKDETD 536

Query: 204 LKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVI 263
           L   + + +   W           M VW D+ ++      +       ++  +PADL++ 
Sbjct: 537 LLPPAYANQADQW-----RKGTDTMDVWFDSGSS------WAAVSSQRESLSYPADLYLE 585

Query: 264 GKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV----- 316
           G D     F +    +  ++ + P  + +     +  KG K+SKSLGNV+DP+ +     
Sbjct: 586 GSDQHRGWFQSSLLTSVAVNGHAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGK 645

Query: 317 ----IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD 372
                   G D LR ++           Y  D             +   V  +   +L +
Sbjct: 646 NQKQEPPYGADVLRLWVSS-------VDYSADVPIGAGILRQLADVYRKVRNTSRYLLGN 698

Query: 373 YDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVD 425
                P   A         D  +L   + V+ EI E  ++    R    + +       +
Sbjct: 699 LHDFNPASDAIAVADLPLLDRWMLQRTAEVMHEITEAFESYEFFRFFQLLQNFCVTDLSN 758

Query: 426 RYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            Y D  K         D R  +   V   +I +LA  +   +  +A  I+  L   
Sbjct: 759 FYLDIAKDRLYVSAPTDQRRRSCQTVMALIIERLAGFIAPVLCHMAEDIWQNLPYP 814



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 16/157 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +     +     Y N   H+GHA   ++ DV+ ++  L G  V +  G D HG  I    
Sbjct: 58  DGPTFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLKGRRVRYVPGWDCHGLPIELKV 117

Query: 63  QNAGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
             +    +               +  +             I   ++    T +K +    
Sbjct: 118 LQSMDQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKEYEAAQ 177

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ ++  KG IY+G     +S        + E+  
Sbjct: 178 IKVFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEY 214


>gi|288928849|ref|ZP_06422695.1| leucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329833|gb|EFC68418.1| leucine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 959

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL+G +VL   G D +G    + 
Sbjct: 29  SKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLEGYNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G    V  + N   +R+  D +  S+D    +RT +  ++   +  ++K+ D   
Sbjct: 89  AIQTGQHPAVTTETNIARYREQLDRIGFSFDWSREVRTCDPTYYKWTQWAFQKMFDSYY 147



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 79/225 (35%), Gaps = 38/225 (16%)

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI  F A  W      A   L    +  G+ +    K+SKS+ NV++P  ++E  G D L
Sbjct: 698 DIEAFRA--WRPEYKDAEFVLENDKYVCGWAVE---KMSKSMYNVVNPDLIVENYGADTL 752

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS-MILKDYDGMIPTPGAFT 384
           R + +      +   +D +G+         +G    + +             +P     T
Sbjct: 753 RLYEMFLGPVEQSKPWDTNGI---------DGCHRFLKKFWGLFYNMRTGEFMPNDAEAT 803

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
                 L    ++L+++  ++     + A+A  +  V+E+ +                  
Sbjct: 804 PEQ---LKSVHKLLKKVSADIPAFSYNTAVAAFMICVNELSQ------------------ 842

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
                    ++ +L + L  F P +A +++  L     + C    
Sbjct: 843 --AHCTNKALLSKLVVALAPFAPHIAEELWAALGNGQSSVCDAQW 885


>gi|218667361|ref|YP_002425048.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218519574|gb|ACK80160.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 937

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 103/304 (33%), Gaps = 27/304 (8%)

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G         I+ VW D+   +                  PADL++ G D     F + 
Sbjct: 523 CGHDHFHKVTDILDVWFDSGCTHAFVLEQRPELHS------PADLYLEGSDQHRGWFQSS 576

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +       P    +     +  +G K+SKS+GNVI P  +I+  G D LR ++  E 
Sbjct: 577 LLESVASRGRAPYRAVLTHGFTVDGEGRKMSKSVGNVIAPQTIIDRYGADILRLWVASED 636

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDE 388
               +       L++  ++         +  +   +L +     P   A       E D 
Sbjct: 637 Y-RSEIPISDTILQQLGDS------YRRIRNTARYMLGNTHDFNPATDALPTADLLEMDR 689

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRA-S 445
            +L+  + + +EIR         R   ++    S      Y D  K          RA  
Sbjct: 690 WMLARTALLQEEIRAAYSEYQFLRVQQRLHHFCSVELGGLYLDVLKDRLYTTPAASRARR 749

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
           +   V  +++  + + +   +   A +I+D +     NR F S+     P   L    + 
Sbjct: 750 SAQTVLWQILEAMVVWMAPILSFTAEEIWDGMG----NRPFSSVFFAQYPEIPLPADSEV 805

Query: 506 IFPR 509
           +  R
Sbjct: 806 LMGR 809



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
               +     Y N + HIGHA   ++ D++ +    +G  V +  G D HG  I    + 
Sbjct: 48  PAFILHDGPPYANGKIHIGHAVNKVLKDIVNKSKLSEGFRVPYVPGWDCHGLPIEIQVEK 107

Query: 65  AGVTTKV 71
                  
Sbjct: 108 ELGRPDE 114


>gi|306829906|ref|ZP_07463093.1| isoleucine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427917|gb|EFM31010.1| isoleucine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 930

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 104/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPGYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|293365883|ref|ZP_06612586.1| isoleucine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702288|ref|ZP_07639246.1| isoleucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291315561|gb|EFE56011.1| isoleucine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307624091|gb|EFO03070.1| isoleucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 930

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 108/283 (38%), Gaps = 24/283 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
             +++ ++  LL   +P  A +I+  L F A+E      L + 
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAEEFVQLSELPEA 787



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|530444|emb|CAA83769.1| Val-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 260

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 11/221 (4%)

Query: 259 DLHVIGKDILRFH-AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI 317
            + V G DI+ F  A    +      +P    +           K+SKSLGN IDP++VI
Sbjct: 17  SVLVTGYDIIFFWVAGNDFSNFRIYKIPFKDVLIHGLVRDELNRKMSKSLGNGIDPMDVI 76

Query: 318 EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMI 377
              G D+LR FL+     G+D  Y  + +    N    N + N  SR V + L D+    
Sbjct: 77  NNNGCDSLRLFLLTNSTPGQDIRYSNEKILASWN--FINKLWN-ASRYVFLNLDDHFEFD 133

Query: 378 PT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKP 433
           P         +++ IL+  S+    + E M       A   +   V       Y +  K 
Sbjct: 134 PNFYKTDLEITNQWILTQLSKTQAYVYEKMNKYEFSLAGNHLWDFVWNKYCSWYIEFSK- 192

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             +  +N             V++++ I+L   +P ++ +I+
Sbjct: 193 --VNLSNDKFNYQTKQTLFYVLKEILIMLHPLIPFVSEEIY 231


>gi|331265959|ref|YP_004325589.1| isoleucyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682631|emb|CBZ00248.1| isoleucyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 930

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 104/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQRDDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|312066999|ref|XP_003136536.1| isoleucyl-tRNA synthetase [Loa loa]
 gi|307768300|gb|EFO27534.1| isoleucyl-tRNA synthetase [Loa loa]
          Length = 1147

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 102/291 (35%), Gaps = 16/291 (5%)

Query: 217 GIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           G  +      +   W ++ +       Y           +PAD    G D     F+ + 
Sbjct: 516 GRGVLHRVSEVFDCWFESGSMPYAQNHYPFERKDDFENNFPADFIAEGIDQTRGWFYTLM 575

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  L    P    + +   +   G K+SK   N  DP++V+ + G DALR +L+    
Sbjct: 576 VLSTALFDRPPFKNLICNGLVLAADGSKMSKRKKNYPDPLKVVGKYGADALRVYLINSPV 635

Query: 335 CG-KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE------SD 387
              ++  + ++G++  +   L         R     ++ Y+          +       D
Sbjct: 636 VRGENLRFREEGVRDVLKDVLLPWYN--AYRFFVQNVQIYECTNGKEFILLDDKSVNIMD 693

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAST 446
           + ILS  + +L  +R  M    ++  +  +      + + Y    +     +  P+  + 
Sbjct: 694 KWILSFTNSLLNFVRNEMSAYRLYAVVLPLTKYFDALTNCYIRLNRKRMKGEDGPEDCAH 753

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFV----ADENRCFQSLDQRL 493
            L     V+  +  L+  F P     ++  L      + E+  F+ + + L
Sbjct: 754 SLSTLGNVLLLIVRLMAPFTPFFCEHLWRNLRHISLSSSESVHFEMIPEPL 804



 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R +        +    PH GH     I DV+ R+   +G  V    G D HG  +   
Sbjct: 38  KGRARYTFYDGPPFATGLPHYGHILAGTIKDVVTRWAHQNGYYVERRFGWDTHGLPVEYE 97

Query: 62  AQN--AGVTTKVF----VDQNSRNFR---------------DMADVLDISYDDFIRTTEK 100
                            +D+ +   R                M   +D   D   +T   
Sbjct: 98  IDKILGIKGPHDVLKLGIDKYNAECRSIVMRYSSDWENTVERMGRWIDFQNDY--KTLYP 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
              ++   ++ ++  KG +Y+G     +S       ++ E
Sbjct: 156 WFMESVWWVFSQLFKKGLVYRGVKVMPFSTACSTPLSNFE 195


>gi|282858941|ref|ZP_06268081.1| leucine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588323|gb|EFB93488.1| leucine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 960

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 3/136 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  DKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +  ++N   +R+  D +     +D  +RT + +++   +  ++ +      
Sbjct: 89  AIQTGQHPAITTEKNIARYREQLDKIGFCFDWDREVRTCDPKYYRWTQWAFQYMFKSYFD 148

Query: 120 YKGCYSGWYSLRDEAY 135
                +       + +
Sbjct: 149 NNLQKAQPIEKLIKHF 164



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 77/181 (42%), Gaps = 37/181 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++++ G D LR + +          +D +G+         +G   
Sbjct: 737 EKMSKSMFNVVNPDVIVDQYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCHR 787

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  ++     P+  +        L    ++++++  +++    + A+A  +  
Sbjct: 788 FLRKFWKLFQQELTDGEPSKDS--------LKSVHKLIKKVTSDIEAFSYNTAVAAFMIC 839

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++E+                  + +       E+++QL I++  F P +A ++++ +  +
Sbjct: 840 INEL---------------GQQKCNN-----KELLKQLIIVIAPFAPHIAEELWEQMGGS 879

Query: 481 D 481
            
Sbjct: 880 G 880


>gi|261602393|gb|ACX91996.1| isoleucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 1053

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 129/359 (35%), Gaps = 15/359 (4%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
                     +     ++        F  +     +     +        E  +  I  V
Sbjct: 438 WIPDWGKSRISNMVKELRDWVISRQRFWGTPLPIWICERCNNVMVVGSKEELESIAIDPV 497

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            + L    +               +   +  VW D+   +  + G        +    P 
Sbjct: 498 PNDLHRPWIDNVRVKCNKCGGVAKRIPDVADVWFDSGVAFFASLGKDWQEKWKELG--PV 555

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL + G D L   F ++     +L    P    +     +  +G ++ KSLGN ++P  V
Sbjct: 556 DLVLEGHDQLRGWFFSLLRSGLILLDRAPYTSVLVHGFMLDEQGREMHKSLGNYVEPSVV 615

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR +L+R     +D  +    L +    DL       V  S+ M L +++  
Sbjct: 616 VEKYGRDILRLWLLRNTT-WEDAKFSWKAL-ELTKRDLQIIWNTFVFASMYMNLDNFEPD 673

Query: 377 IPTPGAF----TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL-VSEVDR-YFDA 430
             T           D  ILS  + +L+++ E+M++  +H     +I+  + +V R Y   
Sbjct: 674 KYTLDDIIKYAKIEDLWILSRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRL 733

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV-ADENRCFQS 488
            +     + N      + Y+   +++Q  IL    +P ++ KI+    V A E+   +S
Sbjct: 734 IRKRAWIEANTQDKIAMYYILYYILKQWIILASTIIPFISEKIYKSFVVNAKESVSMES 792



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 60/166 (36%), Gaps = 21/166 (12%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K REK        YP++  PHIG  +  +I D + R+ R+ G  V    G D HG  I  
Sbjct: 40  KRREKFLFIDGPPYPSSPTPHIGTIWNKVIKDCILRYQRVLGKRVHDQPGYDTHGLPIEV 99

Query: 61  AAQNA------------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEK 100
           A +                        K F   N+         + +   ++    T + 
Sbjct: 100 ATEKLLGISNKQEIIDKIGVETFINKCKEFALSNADKMTQNFKNVGVFMDWERPYYTLDP 159

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +  +   + KK  +KG + KG     +  R E   +D EV +  D
Sbjct: 160 SYISSSWSVIKKAYEKGMLDKGTAVLHWCPRCETTLSDYEVSEYRD 205


>gi|222624881|gb|EEE59013.1| hypothetical protein OsJ_10749 [Oryza sativa Japonica Group]
          Length = 1040

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 119/381 (31%), Gaps = 45/381 (11%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +    +  +Y    N   W     +++        +    +         +R    I   
Sbjct: 496 IPPQYEQDWYRWLENIRDWCVSRQHWWGHRVPAWYVTLEDDQEKTLGSDNDRW---IVAK 552

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                 +   +        +  DP  ++  W  +    L   G+ D+    ++ F+P  +
Sbjct: 553 SESAASVEAQKSYPGKKFILNQDPD-VLDTWFSSALFPLAVLGWPDDTADLRS-FYPTSV 610

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DIL      +      L  ++P  K           G K+ KSLGNVIDP+EVI 
Sbjct: 611 LETGLDILFCWVARMVMMGTQLGGDVPFQKVYLHPIVCDTHGRKMCKSLGNVIDPLEVIN 670

Query: 319 EVGVDALRYFLVREIACGKDGFY------DKDGLKK------------------RVNADL 354
            + ++ L   L        +           DG+ +                  R+N D+
Sbjct: 671 GMTLEGLVKRLEEGNLDPDELNLERKLTDYPDGIAECGTDALRFALISYTSQSDRINLDI 730

Query: 355 -----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIREN 404
                     N +  ++   +         P            + ILS  ++   +   +
Sbjct: 731 KRVVGYRQWCNKLWNAIRFAMGKLGVHYSPPATVDVSIMPPICKWILSALNKATGKTVTS 790

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK-TNPDRASTVLYVTVEV-IRQLAI 460
           ++      A + + S       D + +A KP+   +    + A      T+ V +     
Sbjct: 791 LEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNEPQEFESARVASRDTLWVCLETGLR 850

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL  F+P +  +++  L    
Sbjct: 851 LLHPFMPYITEELWQHLPQPK 871



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 126 STKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVV 185

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + ++      +    L  S D      T +++ 
Sbjct: 186 VEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTILNQLHRLGASLDWSREAFTMDEQR 245

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
            +     + ++  +G IY+      +  
Sbjct: 246 SNAVTEAFVRLHKEGLIYRDNRLVNWDC 273


>gi|322412238|gb|EFY03146.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 933

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 103/281 (36%), Gaps = 25/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLSYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  KGEK+SKS GN+I P +V ++ G D LR ++        D
Sbjct: 572 AVNGYAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDVAKQYGADILRLWVASVDT-DND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                + L         + N +  L++ +                     D+ +  V ++
Sbjct: 631 VRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPA---TDTVAYADLGAVDKYMTIVFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           ++  I +  +          V++   V     Y D  K     +        R  TV Y 
Sbjct: 688 LVATINDAYKRYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSLERRRMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +++ ++  LL   +P    +I+  L    E+  F  L +
Sbjct: 747 --DILVKITKLLTPILPHTTEEIWSYL--EHESEAFVQLAE 783



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +   ++     Y N   H+GHA   I  D++ R   + G    +  G D HG  I +  
Sbjct: 46  GKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPYVPGWDTHGLPIEQVL 105

Query: 63  QNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCRI 108
              GV  K             +        RD    L +S D      T + +       
Sbjct: 106 AKQGVKRKEMDLADYLDMCRQYALSQVNKQRDDFKRLGVSADWENPYVTLDPQFEADQIR 165

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 166 VFGVMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|299066830|emb|CBJ38025.1| putative methionyl-trna synthetase protein (metG) [Ralstonia
           solanacearum CMR15]
          Length = 496

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 81/518 (15%), Positives = 152/518 (29%), Gaps = 67/518 (12%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  R+   +   +  PN   H+GH A   +  D+LAR  R +G  V   + TD +   + 
Sbjct: 1   MNARKPYVLIPVMPTPNGPLHLGHIAGPFLKMDMLARHLRRNGETVALVSATDPYETHVL 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI----RTTEKRHHDTCRILWKKISD 115
             A       +    +N +        LDI YD FI         R +   R +   +  
Sbjct: 61  PRADEQNKPVEQICAENHQAIHRCLQALDIRYDAFIDPLASPYRARLNGITREVLDDLHA 120

Query: 116 KGDIYKGCYSGWYSLRDEAYY-------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +G ++        S R                      G +       V   +       
Sbjct: 121 QGLLHARNEPVHISRRTGRILVGSRIAGTCPCCGVEMGGYHCEGCGMEVSPRDLIDPRAE 180

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
                 ++        +  +P  +R  + + V + ++ ++        G     +P    
Sbjct: 181 PPDDTVEMEVRASVFLDADIPALKRRMLEARVPADVRRIAERFMQATGGAVRLSNPGEWG 240

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF----HAIYWPAFLLSANL 284
            VW +AL    +                      +  +   F     A+   +F     +
Sbjct: 241 EVWPNALATAPSVVFSYTALFMLSVLCGEVARERLALEHNPFDQRSDALIITSFGFDNTV 300

Query: 285 PL----------------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DALR 326
           P                   +  ++ F    G K S S  + I   + + E+GV  D LR
Sbjct: 301 PFCVGVETLAQHSRRYRGFDRYLTNFFYTLDGRKFSTSRQHCIWADQAVRELGVTSDVLR 360

Query: 327 YFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES 386
           YFL +         + +DG            I   +++  + +          P A T  
Sbjct: 361 YFLAKTSPESGPSDFSRDGFDA-----FRRAIEPRLAQMQAAVASGAGDDTAAPYADT-- 413

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAST 446
                   +R++ ++            L      +   D++     PW+           
Sbjct: 414 -------LARLVADMDAAFDVDHFS--LRAATRCI---DQWLAL--PWQ----------- 448

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                   +R   IL    +P+LA+ ++  L  A   R
Sbjct: 449 -PAHAAAYVRGFCILAYPVMPELASTLWRQLGHAGLPR 485


>gi|256370599|ref|YP_003108424.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009391|gb|ACU52751.1| isoleucyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 1224

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 14/282 (4%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG--SKAKFWPADLHVIGKDIL--RFHAIY 274
           K       I+ VW D+         Y         K   +PAD    G D     F  ++
Sbjct: 586 KPMIRESDIIDVWFDSGAMPYAQLHYPFEKKFLIEKKIMFPADFICEGVDQTRGWFFTLH 645

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             + +L  ++     + +   +  KG+K+SKS GN I+P ++I + G D +R++L+   +
Sbjct: 646 AISCMLFNSISFKNVISNGLVLDEKGKKMSKSRGNTINPFKIINKYGPDTIRWYLISNSS 705

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF--TESDESILS 392
             ++  ++   ++K                S+   + ++               D+ ILS
Sbjct: 706 PWENIKFNIKIIEKIKQKLFGTLYNVYYFFSIYAKIDNFKLKEKKILLKKRPFIDKWILS 765

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRY--FDAQKPWEL-KKTNPDRASTV 447
             + ++++      N    +A  ++ + V  +  + Y     ++ W+    TN   A   
Sbjct: 766 ELNSLIKKTDYYYHNYEPTKAARKIENFVIENLSNWYLRLSRKRFWKENYTTNKISAYQT 825

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSL 489
           LY+ +  I +++       P +    +  L    + + F+S+
Sbjct: 826 LYICLSTIYKIS---SPIAPFVMENFYKNLNFYLKKKSFESV 864



 Score = 45.9 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 53/178 (29%), Gaps = 19/178 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA- 65
             I       N  P I H   + I D+  R+  L G  V    G D HG  +    +   
Sbjct: 36  YIIYEGPPSANGYPGIHHILPITIKDLFCRYKTLKGKKVKRKAGWDTHGLPVELVVEKEL 95

Query: 66  ----------------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCR 107
                               K  V +    +  ++  +   I  +    T + ++ +T  
Sbjct: 96  GITKNDIGKKISILKFNTKCKEAVMRYYNEWLKLSKKIGYWIDLEKQYFTFKTKYIETIW 155

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGY 165
            L K   +K  +YKG     YS       +  E+      +        VQ+   +  
Sbjct: 156 WLLKNFHNKNLLYKGYKIQPYSPAAGTGLSSHELNFPGGYKKITDLTIIVQFKCRKNT 213


>gi|218192777|gb|EEC75204.1| hypothetical protein OsI_11456 [Oryza sativa Indica Group]
          Length = 1040

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 119/381 (31%), Gaps = 45/381 (11%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +    +  +Y    N   W     +++        +    +         +R    I   
Sbjct: 496 IPPQYEQDWYRWLENIRDWCVSRQHWWGHRVPAWYVTLEDDQEKTLGSDNDRW---IVAK 552

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
                 +   +        +  DP  ++  W  +    L   G+ D+    ++ F+P  +
Sbjct: 553 SESAASVEAQKSYPGKKFILNQDPD-VLDTWFSSALFPLAVLGWPDDTADLRS-FYPTSV 610

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
              G DIL      +      L  ++P  K           G K+ KSLGNVIDP+EVI 
Sbjct: 611 LETGLDILFCWVARMVMMGTQLGGDVPFQKVYLHPIVCDTHGRKMCKSLGNVIDPLEVIN 670

Query: 319 EVGVDALRYFLVREIACGKDGFY------DKDGLKK------------------RVNADL 354
            + ++ L   L        +           DG+ +                  R+N D+
Sbjct: 671 GMTLEGLVKRLEEGNLDPDELNLERKLTDYPDGIAECGTDALRFALISYTSQSDRINLDI 730

Query: 355 -----ANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQEIREN 404
                     N +  ++   +         P            + ILS  ++   +   +
Sbjct: 731 KRVVGYRQWCNKLWNAIRFAMGKLGVHYSPPATVDVSIMPPICKWILSALNKATGKTVTS 790

Query: 405 MQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK-TNPDRASTVLYVTVEV-IRQLAI 460
           ++      A + + S       D + +A KP+   +    + A      T+ V +     
Sbjct: 791 LEAYKFSDATSAIYSWWQYQLCDVFIEAIKPYFFNEPQEFESARVASRDTLWVCLETGLR 850

Query: 461 LLQAFVPKLANKIFDILFVAD 481
           LL  F+P +  +++  L    
Sbjct: 851 LLHPFMPYITEELWQHLPQPK 871



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             +    I           HIGHA  + I D + R+ R+ G + L+  G D  G      
Sbjct: 126 STKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGVDHAGIATQVV 185

Query: 62  AQNAGVTTK-----------------VFVDQNSRNFRDMADVLDISYD--DFIRTTEKRH 102
            +   +  +                  + ++      +    L  S D      T +++ 
Sbjct: 186 VEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTILNQLHRLGASLDWSREAFTMDEQR 245

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSL 130
            +     + ++  +G IY+      +  
Sbjct: 246 SNAVTEAFVRLHKEGLIYRDNRLVNWDC 273


>gi|187477909|ref|YP_785933.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123725187|sp|Q2L2K5|SYI_BORA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115422495|emb|CAJ49020.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 953

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 228 MYVWIDALTNYLTT---TGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + VW D+ + + T      +  +    +   WPADL++ G D     FH+      +L  
Sbjct: 544 LDVWFDSGSTHATVLGGKDHALHGSHGEQLAWPADLYLEGSDQHRGWFHSSLLTGCMLYG 603

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    +     +  +G K+SKS+GNVI P +V + +G + LR ++      G+     
Sbjct: 604 QPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLGAEILRLWVASTDYSGE-LSIS 662

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQE 400
            + LK+ V  +    I N + R +   + D+DG+      G   E D   L + +++  E
Sbjct: 663 DEILKRVV--EGYRRIRNTL-RFLLANVADFDGVNQAVPYGDLLEIDRYALVMTAQMQAE 719

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIR 456
           ++ + Q+   H A++++ +  SE     Y D  K   L    P      +     +++ +
Sbjct: 720 VQAHYQSYDFHPAVSRLQTFCSEDLGAFYLDILKD-RLYTNAPGSHARRSAQTALLDITQ 778

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  L+   +   A + + +L
Sbjct: 779 TLVKLMAPILSFTAEEAWKVL 799



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 45  KGRPLFILHDGPPYANGDIHIGHAVNKILKDIIVKSRSMAGYDAPYVPGWDCHGMPIEIQ 104

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     R     L +   +D+   T    +      +
Sbjct: 105 VEKKFGKNLPVTEVHAKARAYALEQLDRQRQDFKRLGVLGDWDNPYLTMNFSNEADEIRV 164

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I +KG +++G     +     +   + EV  
Sbjct: 165 LARILEKGYVFRGLKPVNWCFDCGSALAEAEVEY 198


>gi|78484840|ref|YP_390765.1| isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363126|gb|ABB41091.1| Isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 943

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 17/267 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+  ++ T                PADL++ G D     F +    A   +   
Sbjct: 537 ILDVWFDSGISHFTVLN------QRDELSTPADLYLEGSDQHRGWFQSSLLTALATNGEA 590

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G+K+SKS GNV+ P ++  + G D LR ++       +    D+ 
Sbjct: 591 PYKQVLTHGFTVDKDGKKMSKSKGNVVAPQDIANKYGADILRLWIAAADYRYEMTVSDE- 649

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
                  AD    I N  SR +   +  +D M            D+ ++   + + +EI 
Sbjct: 650 --IISRTADAYRRIRNT-SRFLLANMNGFDPMKDQVPYDKMLPLDQWVVGQAAAIQKEII 706

Query: 403 ENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLA 459
              ++   H     V  L S      Y D  K  +   K +     +       +   L 
Sbjct: 707 AAYESYNFHAIYQAVTHLCSVELGAFYLDVIKDRQYTAKADGLPRRSAQTALYHIAEALT 766

Query: 460 ILLQAFVPKLANKIFDILFVADENRCF 486
             +   +   A +++  L        F
Sbjct: 767 RWIAPILSFTAEELWKALPGEHSATVF 793



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 27/66 (40%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           M  R K  +     Y N   HIGHA   ++ D++ +   L G D  F  G D HG  I  
Sbjct: 46  MAGRPKFILHDGPPYANGNIHIGHAVNKVLKDMIVKSKGLSGFDAPFVPGWDCHGLPIEL 105

Query: 61  AAQNAG 66
             +   
Sbjct: 106 NVEKKK 111


>gi|15892976|ref|NP_360690.1| valyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|81527972|sp|Q92GR9|SYV_RICCN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15620172|gb|AAL03591.1| valyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 812

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 118/335 (35%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E +   +S         Y   P  +   +R  E    + + +  L +           K 
Sbjct: 388 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADVTQLPIDPLKDLPMGYSKE 447

Query: 221 PDDPQY-IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY- 274
             +P Y +M  W  +  +   +T  + +          K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGM----IPTPGAFTESD 387
             G D  Y +D    +    L N + N           LK  D              E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNAAKFVFIHFDKLKGEDKKASLLDIKEKITNEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDR 443
           + +++    +++     +QN     A+            D Y +  K     +   NP  
Sbjct: 625 KWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVLCDNYLEISKTRSYDEEHKNPQG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 15/146 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +  
Sbjct: 35  KEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTERLV 94

Query: 63  QNA------GVTTKVFV-------DQNSRNFRDMADVLDISYDD--FIRTTEKRHHDTCR 107
           +         +    F+       +     FR + + + +S D     +T         +
Sbjct: 95  EKQKQIKAYNMDRSEFIKICEEVVESEEEKFRSLFNQIALSVDWSLEYQTISPLSRKISQ 154

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDE 133
           + +  +  K +IY+      +   D 
Sbjct: 155 MSFLDLVQKEEIYRTNQPILWDPVDG 180


>gi|291277642|ref|YP_003517414.1| isoleucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964836|emb|CBG40695.1| isoleucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 918

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 70/460 (15%), Positives = 147/460 (31%), Gaps = 31/460 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDIS------ 90
           ++     D+      D+ G    +      +             +++ ++L  S      
Sbjct: 333 YYVALKYDLEVLMPVDDRGHYDEQIIHKNLLPKHFLGQHIFAAQKEIIEMLGDSLLKHTV 392

Query: 91  ----YDDFIRTTEKRHHD-TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD---EVY 142
               Y    R+ +   +  T +          +          ++    +Y ++    +Y
Sbjct: 393 ITHSYPHCWRSHKPVIYRATTQWFILMDKPFREGKTLRQIALEAIDKTTFYPENGRNRIY 452

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
              + +          W     +F     +   L     +H +     E  +   S    
Sbjct: 453 SMVENRPDWCISRQRDWGVPLAFFQNKKDHSILLDDAVLNHLKARFEKEGCDIWWSEEIE 512

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
            L   S                 +I+ VW ++ + +        N    +A  +PAD+++
Sbjct: 513 NLLPQSHKHLA-----PELFKCGHILDVWFESGSTWQAVLKTKTNNPPYQAGNYPADMYL 567

Query: 263 IGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEV 320
            G D     F +    +  +    P    +     +  KGEK SKS GNVI P  +++  
Sbjct: 568 EGSDQHRGWFQSSLLLSCAILGEAPFKSILTHGFTVDEKGEKQSKSKGNVIPPETILKNQ 627

Query: 321 GVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP 380
           G + LR ++        D     + + +   A+    I N + R +   + D + + P  
Sbjct: 628 GSEILRLWVAMNDYQ-SDLRISANIIAQV--AEQYKKIRNTL-RFLLANINDLETLAPKE 683

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVI-SLVSEVDR-YFDAQKPWELKK 438
              +  D  IL         ++         + L  ++  + +E+   Y D  K   L  
Sbjct: 684 N-LSPIDVWILKTTKNTFSLVQSYFAKYDFVKGLQILMYYISNELSGIYMDLCKD-SLYC 741

Query: 439 TNPDRASTVLYVTVEVI--RQLAILLQAFVPKLANKIFDI 476
            + D  S   + +  V+  R LA LL   +    +++ D 
Sbjct: 742 DHKDSVSVQAHKSTMVLIARNLAHLLAPILTYTIDEMLDF 781



 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 17/177 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +   +I     Y N   HIGHA   I+ D++ + H   G  + +T G D HG  I +  +
Sbjct: 48  KNSFFIHDGPPYANGNLHIGHALNKILKDIITKTHYFQGERITYTPGWDCHGLPIEQQVE 107

Query: 64  NAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTE-KRHHDTCR 107
                 K                 +  +   +    L +   +++  +T +     D   
Sbjct: 108 KNLGKEKEKLDTLTIRKLCRDHAKKFVQIQSEEFQQLGVIGDFENPYKTMDFPFESDIFD 167

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
            L K I+  G + +     ++S   +    D EV              P++   ++ 
Sbjct: 168 TLCK-IAKAGLLVERNKPIYWSWACQTALADAEVEYKDKQSDSIYVAFPLEEQAQKQ 223


>gi|261393180|emb|CAX50798.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase; IleRS)
           [Neisseria meningitidis 8013]
          Length = 929

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 105/306 (34%), Gaps = 30/306 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +  D     M VW D+ + + +           +   WPADL++ G D     F +   
Sbjct: 524 CEHYDKLSDTMDVWFDSGSTHYSVVK------QREELDWPADLYLEGSDQHRGWFQSSML 577

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +      
Sbjct: 578 TGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS--- 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 Y  +    +            +  ++S +  +     P   A  ++D   +   
Sbjct: 635 ----TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRY 690

Query: 395 SRVLQE------IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
           + VL          +       H A+  ++S  SE     Y D  K      K +     
Sbjct: 691 AVVLARRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARR 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLH 500
           +       + R L +L+   +     + +DI+   +E+               K    L 
Sbjct: 751 SAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKAEAELV 810

Query: 501 KTFDPI 506
           K +  I
Sbjct: 811 KKWTAI 816



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|125717516|ref|YP_001034649.1| isoleucyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166229774|sp|A3CLP4|SYI_STRSV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125497433|gb|ABN44099.1| Isoleucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDIVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +V+ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DVLVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        ++    L +S D      T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|296270263|ref|YP_003652895.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermobispora bispora DSM 43833]
 gi|296093050|gb|ADG89002.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermobispora bispora DSM 43833]
          Length = 836

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 95/256 (37%), Gaps = 19/256 (7%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           DP  +M  W  +        G+  + D    + +P DL     +I+     +    + L 
Sbjct: 498 DPD-VMDTWATSSLTPQIAGGWERDDD-LFKRVFPMDLRPQAHEIIRTWLFSTVLRSHLE 555

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP      S   +    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  
Sbjct: 556 HGTLPWKHAAISGWILDPDRKKMSKSKGNVVTPMALLEQYGSDAVRYWAASGRP-GTDTA 614

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D   +K  +   LA  I N+    +    K               D S+L+  + V+++
Sbjct: 615 FDIGQIK--IGRRLAIKILNVSKFVLGFPAKG------DLKVTEPIDRSMLAGLAAVVKD 666

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
             E  +     RAL +         D Y +  K       +P   +         +  + 
Sbjct: 667 ATEAFEGYDYTRALERTERFFWSFCDDYVELVKARAYA-GDPSAVAA----LRRALDVML 721

Query: 460 ILLQAFVPKLANKIFD 475
            L   F+P +  +++ 
Sbjct: 722 RLFAPFLPFVTEEVWS 737



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 2  KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
          + R+++Y I T     +   H+GH +     D +AR+ R+ G +V +  G D++G    +
Sbjct: 30 RNRDEIYSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMRGREVFYPMGWDDNGLPTER 89

Query: 61 AAQN 64
            QN
Sbjct: 90 RVQN 93


>gi|119946877|ref|YP_944557.1| isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166229761|sp|A1SZP3|SYI_PSYIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119865481|gb|ABM04958.1| Isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 944

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 11/270 (4%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ T + +     +       +   AD+++ G D     F +    +  ++   P
Sbjct: 533 LDVWFDSGTTHASVVAKREEYTLESGEQAAADMYLEGSDQHRGWFQSSLMTSMAINNKAP 592

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +   G+K+SKSLGNV+ P  V+  +G D LR ++      G+    D+  
Sbjct: 593 YKEVLTHGFVVDGNGKKMSKSLGNVMSPQTVMNNLGADILRLWVASTDYTGEMTVSDE-- 650

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
           +  R +AD    I N  SR +   L  +D              D  I++    +  ++ E
Sbjct: 651 ILNR-SADSYRRIRNT-SRFLLANLNGFDPTTDLVPNEEMVALDRWIVAQTLILQNDVIE 708

Query: 404 NMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
             ++  +H    ++    S      Y D  K  +   K + +   +       +   L  
Sbjct: 709 AYESYSLHAVYQKLTHFCSIELGSFYLDIIKDRQYTAKADSNAHRSCQTALFHIAEALVR 768

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLD 490
           L+   +   A++I+  L  A +   F ++ 
Sbjct: 769 LMAPILSFTADEIWARLPGARDEFVFTTVW 798



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 16/166 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   L   D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGDIHIGHSVNKILKDIIIKSKTLSDFDAPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +         +   +  FR              R    R  D  R  +K++   G+  K
Sbjct: 106 VEQKVGKPGKKIS--AAEFRKKC-----------REYAARQVDGQRKDFKRLGVLGEWDK 152

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
              +  +           +V K     + +    PV W  E G   
Sbjct: 153 PYLTMDFGTEANIVRALAQVIKN---DHLHKGSKPVHWCTECGSAL 195


>gi|325694115|gb|EGD36033.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNCP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILGQVSET------YRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +V+ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DVLVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 62/175 (35%), Gaps = 14/175 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        ++    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +++ KG IY+G    ++S   E+   + E+             N V+  +E
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYHDLVSTSLYYANRVKDGKE 219


>gi|124024122|ref|YP_001018429.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964408|gb|ABM79164.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 1370

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 81/501 (16%), Positives = 158/501 (31%), Gaps = 83/501 (16%)

Query: 37   FHRLDGLDVLFTTGTDEHGQKIAKAA--------QNAGVTTKVFVDQNSRNFRDMADVLD 88
            F+     D+      DE G   ++A         ++A  T    +++     +       
Sbjct: 768  FNTGKKNDLGMLCPVDESGTMTSEAGPFAGLNVLKDANPTIIAALEERGALLKHEPYAHR 827

Query: 89   ISYDDFIRTTEKRHHDTCRILWKKISDKGDIY--------------KGCYSGWYSLRDEA 134
              YD   RT +          +  +    +                +         R + 
Sbjct: 828  YPYDW--RTKKPTIFRATEQWFASVEGFRNEALTAINSVEWLPASGRNRMEAMVRERGDW 885

Query: 135  YYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRN 194
              +    +      +Y  + N V   +E     +    +     ++E +   +LP     
Sbjct: 886  CISRQRTWGVPIPVFYEREGNEVLLNDETLAHVKALITEHGADVWWERNEVELLPPAYAA 945

Query: 195  EVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK 254
            E   + K                          M VW D+ ++      +          
Sbjct: 946  EAERWRKG----------------------TDTMDVWFDSGSS------WAAVASQQDGL 977

Query: 255  FWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVID 312
             +PA+L++ G D     F +    +  +++  P  + +     +  KG K+SKSLGNV+D
Sbjct: 978  AYPAELYLEGSDQHRGWFQSSLLTSVAINSQAPYRQVLTHGFALDEKGRKMSKSLGNVVD 1037

Query: 313  P---------IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
            P          +     G D LR ++   +    D       L  R  AD+   + N  S
Sbjct: 1038 PAVIIDGGKNQKQEPPYGADVLRLWV-SSVDYSADVPIGTSIL--RQIADVYRKVRNT-S 1093

Query: 364  RSVSMILKDYDGMIPTPG--AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV--IS 419
            R +   L D+D              D  +L   + V+ EI         +R    +    
Sbjct: 1094 RYLLGNLHDFDPERDAIAVPELPLLDRWMLQRTAEVMDEISTAFDRYEFYRFFQLLQSYC 1153

Query: 420  LVSEVDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            +V   + Y D  K         +       TV+ +   +I +LA  +   +  +A  I+ 
Sbjct: 1154 VVDLSNFYLDIAKDRLYVSSPSERRRRSCQTVMAL---IIERLAGAISPVLCHMAEDIWQ 1210

Query: 476  ILF--VADEN---RCFQSLDQ 491
             L   VA+++   R + ++ +
Sbjct: 1211 NLPYSVAEDSVFRRGWPTVPE 1231



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 16/155 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +   +     Y N   H+GHA   ++ D++ +   L G  V F  G D HG  I      
Sbjct: 461 QNFTLHDGPPYANGALHMGHALNKVLKDIINKHQILRGRQVRFVPGWDCHGLPIELKVLQ 520

Query: 65  AGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                +               F  +   +         +   ++    T +K +      
Sbjct: 521 NLNQEQREALTPLKLRKKAAAFARKQVDSQMAGFRRWGVWADWEHPYLTLQKEYEAAQIQ 580

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++  +  KG IY+G     +S        + E+  
Sbjct: 581 VFGTMFQKGYIYRGLKPVHWSPSSRTALAEAELEY 615


>gi|322377417|ref|ZP_08051908.1| isoleucine--tRNA ligase [Streptococcus sp. M334]
 gi|321281617|gb|EFX58626.1| isoleucine--tRNA ligase [Streptococcus sp. M334]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L +             +  ++  ++ +     P             D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDTVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|307331666|ref|ZP_07610773.1| isoleucyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306882692|gb|EFN13771.1| isoleucyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 1045

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 92/258 (35%), Gaps = 8/258 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           ++  W D+ +      GY           +PA       D     F+ +     L+    
Sbjct: 521 VIDAWYDSGSMPFAQYGYPYRNKELFESRYPAQFISEAIDQTRGWFYTLMAVGTLVFDKS 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
                V     +   G K+SK LGN++ PI ++++ G DA+R+F+    +          
Sbjct: 581 SYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFMAAGGSPWAARRVGHG 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--ESDESILSVCSRVLQEIR 402
            +++ V   L      +  +++      +      P        D  +L     + +++ 
Sbjct: 641 TIQEVVRKTLLTYWNTVAFQALYARTSGWAPSAADPAPAERPLLDRWLLGELGTLTEQVT 700

Query: 403 ENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
           E ++     RA   + + V ++  ++  +      + +     T      +VI  +  L+
Sbjct: 701 EALEAYDTQRAGKLLSAFVDDLSNWYVRRSRRRFWQGDAAALRT----LHDVIETVTRLM 756

Query: 463 QAFVPKLANKIFDILFVA 480
              VP +  +++  L V 
Sbjct: 757 APLVPFITERVWQDLVVP 774



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +          N  P   H    +  DV  RF  + G  V    G D HG  +  A
Sbjct: 39  EGRPEWVFYEGPPTANGMPGAHHIEARVFKDVFPRFRTMRGYHVDRKAGWDCHGLPVELA 98

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       +  V +++  F ++   +      D    T    +
Sbjct: 99  VEKELGFNGKKDIEAYGIAEFNAKCRESVTRHTDAFAELTTRMGFWTDLDGAYWTMNPGY 158

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++     K+I +KG + +      +  R     +D E+ +G +
Sbjct: 159 IESVWWSLKEIFNKGLLVQDHRVAPWCPRCGTGLSDHELAQGYE 202


>gi|295136258|ref|YP_003586934.1| leucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984273|gb|ADF54738.1| leucyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 1083

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D  G    +
Sbjct: 28  SEKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISD 115
            A   G    +    N   +R+  D +  S+D    +RT+   ++   + ++ ++ +
Sbjct: 88  YAIQTGQHPAITTKDNIARYREQLDKIGFSFDWSREVRTSNPEYYKWTQWIFSELFE 144



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 73/181 (40%), Gaps = 33/181 (18%)

Query: 301  EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            EK+SKS  NV++P ++ E+ G D LR + +      +   ++  G+    N      +  
Sbjct: 857  EKMSKSKYNVVNPDDICEDYGADTLRMYEMFLGPIDQAKPWNTAGITGVHN--FLKKLWK 914

Query: 361  LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            L           ++       A +      L    + ++++ E+++N   + +++  +  
Sbjct: 915  LY-----FNNDQFEVSEEKASADS------LKTLHKTIKKVTEDIENFSFNTSVSTFMIC 963

Query: 421  VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
            V+E++                         + EV+  LA+L+  + P +A +++  L  +
Sbjct: 964  VNELN--------------------AQKCNSREVLEPLAVLIAPYAPHIAEELWSKLGHS 1003

Query: 481  D 481
            +
Sbjct: 1004 E 1004


>gi|183221665|ref|YP_001839661.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911741|ref|YP_001963296.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|254782416|sp|B0SBW4|SYI_LEPBA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782417|sp|B0STE5|SYI_LEPBP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167776417|gb|ABZ94718.1| Isoleucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780087|gb|ABZ98385.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase; IleRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 915

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 137/400 (34%), Gaps = 33/400 (8%)

Query: 127 WYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ------WMEEEGYFFRLSAYQDKLLSYY 180
              LRDE+    D+V    D        + V+         +  +   + ++  K     
Sbjct: 419 HNGLRDESLKAIDKVQWIPD-WGITRIRSMVESRPDWCLSRQRNWGVPIPSFTCKSCGLT 477

Query: 181 ESH----PEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALT 236
                    FI  +++    + + K     L    K  + G +     + I+ VW D+  
Sbjct: 478 HLDDKTIQHFIQIVKKEGIEVWYEKEAKDLLPADTKCSNCGSEDLKQDKDILDVWFDSGV 537

Query: 237 NYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHG 294
           +     G     +       PADL++ G D     F +  WP+  +    P    +    
Sbjct: 538 SSFAVFGDSIGKE-------PADLYLEGSDQHRGWFQSSLWPSMAIRKTPPYKSVLTHGY 590

Query: 295 FILHKGEKISKSLGNVIDP-IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
            +  KG  +SKSLGNVI+P  ++I + G D LR ++        D    KD +K    ++
Sbjct: 591 VLDEKGHAMSKSLGNVINPTTDIINQYGADILRLWV-STQDFRDDVKIGKDSIKTV--SE 647

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
               I N     +     +              D+  L   +++  E+++       H+ 
Sbjct: 648 AYRKIRNTFRYLLGNTSAETLTWNLKKEELDTIDKYYLHKLAKLNDEVKKLYDTYQFHQV 707

Query: 414 LAQVISL--VSEVDRYFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
             +++    V     YF+  +       K +  R S+  Y    ++  L+ LL   +   
Sbjct: 708 YHKILGFCTVDLSQDYFEIIRDRMYCDAKESKTRRSS-EYTLAVILEVLSKLLAPILSFT 766

Query: 470 ANKIFDILFVADENR--CFQSLDQRLKPGFMLHKTFDPIF 507
             +++      D      F  L + L     L     P+F
Sbjct: 767 TEEVWTSFGKKDSVFYSDFSDLTEWLDE--SLESKMKPVF 804



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 45/157 (28%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   H+GH+   I+ D++ +   L G       G D HG  I   
Sbjct: 52  KSKPSFVLHDGPPYANGNFHVGHSLNKILKDIIIKSKTLSGYQTDMIPGWDCHGLPIEVQ 111

Query: 62  AQNA------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR---------TTEKRHHDTC 106
                              +      +         + F+          T         
Sbjct: 112 VLKNLGKEARNTGPSELRKKCREYAAEFVGKQGEDLNRFLCFWDENNKYLTMAPEFEARI 171

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++  +  KG IYKG    ++ +     + + E+  
Sbjct: 172 VEVFGSLFAKGYIYKGKKPVYWCIDLATAHAEAEIEY 208


>gi|94264111|ref|ZP_01287910.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93455527|gb|EAT05717.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 949

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 101/289 (34%), Gaps = 15/289 (5%)

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
           +    L D          G       + I+ VW D+  +      +    +       PA
Sbjct: 515 WFARPLADFIGPDARCSCGATDFAKEEDILDVWFDSGVS------FAAVLEQRDELTSPA 568

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           DL++ G D     F +    +       P    +     +  +G+K+SKS+GNVI P ++
Sbjct: 569 DLYLEGSDQHRGWFQSSLLASVGTRGAAPYKAVLTHGFVVDGQGKKMSKSVGNVIAPDKI 628

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           I++ G + LR +   E     D    ++ L  R  AD      N +   +  +       
Sbjct: 629 IKQHGAEILRLWAASEDY-RDDIRISENIL--RQLADAYRKTRNTIRFMLGNLHDFEPAR 685

Query: 377 IPTPGA-FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKP 433
              P     E D  IL+      Q+ +E+      H+   Q+ +   VS    Y D  K 
Sbjct: 686 HRRPAEGMAELDRWILARFELFRQKSQESYDKFEFHQFYHQLYNFCTVSLSALYLDIVKD 745

Query: 434 WELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                   D R      V  E+   L  LL   +  LA + ++ L   D
Sbjct: 746 RLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEAWEHLPADD 794



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 16/155 (10%)

Query: 5   EKLYIS-TAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
             LYI      Y N   H+GHA   I+ D++ +  R+ G    +  G D HG  I     
Sbjct: 47  RPLYILHDGPPYANGHLHMGHALNKILKDIILKAKRMSGYHCPYVPGWDCHGLPIELNVD 106

Query: 64  NAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
               + K              +  +     R+    L +   +     T +  +      
Sbjct: 107 KELGSKKAEVDKLAFRETCRRYAAKWIAIQREEFARLGVLGDWQQPYLTIDYSYEAAIAR 166

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +      G I +      +         + EV  
Sbjct: 167 EFNNFLLNGAISRSRKPVHWCASCTTALAEAEVEY 201


>gi|121606059|ref|YP_983388.1| valyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595028|gb|ABM38467.1| valyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 979

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 78/545 (14%), Positives = 161/545 (29%), Gaps = 105/545 (19%)

Query: 27  EMIIADVLA-------RFHRLDGLDVLFTTG-------TDEHGQKIAKAAQNAGVTTKVF 72
           E ++ DV         R+  L G +V+            D++  K         VT    
Sbjct: 260 ETMLGDVAVMVHPEDERYMHLIGKEVVLPLCNRNIPVIADDYVDK-EFGTGVVKVTPAHD 318

Query: 73  VDQNSRNFRDMADVLDI-SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLR 131
            +  +   R    ++ + + D  I       +        + +   D+    +       
Sbjct: 319 TNDYAVGQRHKLPIIGVLTLDAAINDNAPEKYRGLDRFVARKAVVADLEAAGFLVEVKKH 378

Query: 132 DEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIE 191
                      +  +    +     V  + E+    +  +   K +   +S     +P +
Sbjct: 379 KLMVPRCTRTGQVIEPMLTDQWFVAVNKVSEQDPTAK--SIAQKAIDAVDSGAVKFVPEQ 436

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWG--IKIPDDPQYIMYVWIDAL-------------- 235
             N   +     ++D  +SR+   WG  I    D    +YV  D                
Sbjct: 437 WVNT-YNQWMGNIQDWCISRQ-LWWGHQIPAWYDEDGQVYVATDEAAAQAQAPGKTLRRD 494

Query: 236 -----TNY-----LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSAN 283
                T Y       ++            F P+ + V G DI+ F    +       +  
Sbjct: 495 EDVLDTWYSSALVPFSSLGWPEKTKELDLFLPSSVLVTGYDIIFFWVARMIMMTTHFTGQ 554

Query: 284 LPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI-------------------------- 317
           +P             +G+K+SKS GNV+DP+++I                          
Sbjct: 555 VPFRHVYIHGLVKDAQGKKMSKSEGNVLDPVDLIDGIELAPLLDKRSQGLRKPETAPQVR 614

Query: 318 -----------EEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
                         G DALR+      + G+   +D    +     +  N + N  +R  
Sbjct: 615 KNTEKEFPAGIPGYGADALRFTFASLASLGRSINFDSKRCEG--YRNFCNKLWN-ATRFT 671

Query: 367 SMILKDYDG-------MIPTPG-------AFTESDESILSVCSRVLQEIRENMQNQLIHR 412
            M  +  D            PG        F+++D  I S   RV  ++ +      +  
Sbjct: 672 LMNCEGQDCGLNEHSKEQCAPGSEFENYLDFSQADRWIASTMQRVELDVAKGFAEYRLDN 731

Query: 413 ALAQVISLVSE--VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLA 470
               +   + +   D Y +  K  ++++ N  +        +  +  +  L    +P + 
Sbjct: 732 VAGSIYQFIWDEFCDWYLEIAKV-QIQQGNDAQKRATRRTLIRTLEGILRLAHPLIPFIT 790

Query: 471 NKIFD 475
            +++ 
Sbjct: 791 EELWQ 795



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 56/181 (30%), Gaps = 25/181 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    I           H+GHA+   I D L R+HR+ G + L+  GTD  G      
Sbjct: 65  ESKPSFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMKGDNTLWVPGTDHAGIATQIV 124

Query: 62  AQNAGV------------TTKVFVDQNSRNFRDMADVLD-------------ISYDDFIR 96
            +                T             +  +                +S+     
Sbjct: 125 VERKLQGEEGKTRHDMGATPAEARKNFVAKVWEWKEESGSTITRQMRRMGDSVSWKHEYF 184

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNP 156
           T + +        + ++ ++G IY+G     +    ++  +D EV    +  +      P
Sbjct: 185 TMDPKMSKVVTSTFVQLYEQGLIYRGKRLVNWDPILKSAVSDLEVESEEEDGFMWHIRYP 244

Query: 157 V 157
           +
Sbjct: 245 L 245


>gi|325268322|ref|ZP_08134955.1| leucyl-tRNA synthetase [Prevotella multiformis DSM 16608]
 gi|324989464|gb|EGC21414.1| leucyl-tRNA synthetase [Prevotella multiformis DSM 16608]
          Length = 973

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V   +N   +R+  D +  S+  D  +RT +  ++   +  ++++ +   
Sbjct: 88  YAIQTGQHPEVTTQKNIARYREQLDKIGFSFDWDREVRTCDPHYYHWTQWAFERMFNSYY 147

Query: 119 IYK 121
            Y 
Sbjct: 148 DYT 150



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 97/219 (44%), Gaps = 43/219 (19%)

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +   +A+ P P  V+  G+ +    K+SKS+ NV++P +++E+ G D LR + +     
Sbjct: 727 RSAESTADRPTPAAVYKCGWAIE---KMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPV 783

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
                +D +G+         +G    + +   +  ++ DG  P+  +        L    
Sbjct: 784 EASKPWDTNGI---------DGCFRFLKKFWKLYQQELDGGKPSKES--------LKSVH 826

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R+++++  +++    + A++  +  V+E+                  + ++      E++
Sbjct: 827 RLIKKVTGDIEQFSYNTAISAFMICVNEL---------------GQQKCAS-----RELL 866

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQ 491
           +++ +L+  F P +A ++++ L    ++ C   + + D+
Sbjct: 867 KKMIVLIAPFAPHMAEELWEQLGGETKSVCDAAWPAWDE 905


>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 932

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 127/389 (32%), Gaps = 22/389 (5%)

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           R  E   +      +  +                +     +  D +Y     +       
Sbjct: 407 RCKEPIIYRATEQWFSSVDGYRQEALQAIDQVQWIPS---WGHDRIYNMIHDRGDWCISR 463

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
              W      F+     +  +     +H + I   E  +   +  ++ L  L        
Sbjct: 464 QRVWGVPIPIFYCKHCGEYIINDETVAHLQKIFAEEGSDAWWAHSEAEL--LPEGFTCPA 521

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
            G         IM VW D+   +                 +P DL++ G D     F++ 
Sbjct: 522 CGSHEFRKESDIMDVWFDSGCTHQGVLK------HDPDLSYPCDLYLEGSDQHRGWFNSS 575

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +   +   P    +     +  +G K+SKS+GN + P EVIE+ G D +R ++    
Sbjct: 576 LLTSVATNGYAPYKAVLTHGFTVDGEGRKMSKSVGNTVAPQEVIEKYGADVMRLWVSSAD 635

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESIL 391
             G D       LK+   +D+   I N   R +   L D+D    +    A TE D+  L
Sbjct: 636 YQG-DIRLSPKILKQL--SDVYRKIRNTF-RYLLGSLADFDPAKDSVPYEALTELDKWAL 691

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVL 448
           S   +V + + E+ +    H     + +   V     Y D  K     ++ +     +  
Sbjct: 692 SRLEQVRESVTESYETYQFHVMYHTIHNFCTVDLSAMYLDVIKDRLYTERQDAPVRRSAQ 751

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                ++  L  ++   +   A +++  +
Sbjct: 752 TTIYRILTTLVKIVAPVLSFTAEEVWQHM 780



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 21/160 (13%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            K  +     Y N + HIGHA   ++ D++ ++    G    +  G D HG  I  A   
Sbjct: 48  PKFILHDGPPYANGKLHIGHALNKVLKDIVLKYKTQQGFYTKYVPGWDTHGLPIEHAVIK 107

Query: 65  A------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR------------TTEKRHHDTC 106
                   +T      +      +    ++I  +DFIR            T +       
Sbjct: 108 NTGLNRHEMTPLELRKKCRDYALEQ---VEIQKNDFIRFGVLGEWEHPYLTLQHHIEVEQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ K++  G IYKG  + ++    E    + E+    D
Sbjct: 165 IGVFGKMAKNGHIYKGKKTVYWCPHCETALAEAEIEYKED 204


>gi|255733072|ref|XP_002551459.1| isoleucyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131200|gb|EER30761.1| isoleucyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 1091

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 106/266 (39%), Gaps = 11/266 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y    +      +PA+    G D     F+ +      L  
Sbjct: 533 EEVFDCWFESGSMPYASQHYPFENEKKFLNAFPANFISEGLDQTRGWFYTLTVLGTHLFN 592

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF-Y 341
             P    + +   +   G+K+SK L N  DP  V+++ G DALR +L+       +   +
Sbjct: 593 TAPYQNVIVTGIVLAADGKKMSKRLKNYPDPTLVLDKYGADALRLYLINSPVLRAETLKF 652

Query: 342 DKDGLKKRVNADLANGI--GNLVSRSVSMILKDYDGMIPTPGAF---TESDESILSVCSR 396
            ++G+K+ V++ L         +  +  +  K+ +       +       D  +L+    
Sbjct: 653 KEEGVKEIVSSVLLPWYNSFKFLKDAADLFKKEQNQDFVYDSSLKSTNVMDRWLLASIQS 712

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLYVTVE 453
           +++ I + MQ   ++  + +++  + ++ + Y   + ++       + D     L    E
Sbjct: 713 LIKFIHQEMQGYRLYTVVPKLLHFIDDLTNWYIRFNRRRIKGYSSEDTDDTRKGLNTLAE 772

Query: 454 VIRQLAILLQAFVPKLANKIFDILFV 479
            +  L+  +  F P LA+ I+  + V
Sbjct: 773 ALLTLSRAMAPFTPYLADGIYQRIKV 798



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 23/166 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           K+           +    PH GH     + D++ R+  ++G  V    G D HG  +  +
Sbjct: 45  KDLPPFAFFDGPPFATGTPHYGHILASTVKDIIPRYATMNGFHVERRFGWDTHGLPVEHE 104

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +  G+T+K                     + D+  R  + +   +D+  D   +T   
Sbjct: 105 IDKKLGITSKEDVYAMGIDKYNAECRSIVMRYADEWRRTIKRLGRWIDMDNDY--KTLYP 162

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
              ++    +K++  K  +Y+G     YS       ++ E  +   
Sbjct: 163 EFMESVWWAFKELFKKDAVYRGLRVMPYSTACTTPLSNFEAQQNYK 208


>gi|319939619|ref|ZP_08013978.1| isoleucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811208|gb|EFW07514.1| isoleucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 100/273 (36%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGL--KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSR 396
                D L         + N +  L++ +     K+              D+ +    ++
Sbjct: 631 VRISMDILSQVSETYRKIRNTLRFLIANTSDFNPKE---DTVAYDDLRSVDKYMTVRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IRE   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIREAYADFEFLDIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++  +  LL   +P  A +I+  L    E 
Sbjct: 747 --DILVNITKLLTPILPHTAEEIWSYLEHEPEE 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDFI--RTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLAEYLKLCRDYALSQVDKQREDFKRLGVSGDWEHPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|257867508|ref|ZP_05647161.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257801564|gb|EEV30494.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 929

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 24/271 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++                 +PAD+++ G D     F++    +  +
Sbjct: 516 KETDIMDVWFDSGSSHEAVLRQRP------ELTFPADMYLEGSDQYRGWFNSSITTSVAI 569

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D  
Sbjct: 570 NEVAPYKAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV-SSVDYEADVR 628

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCS 395
              D L      +  + +   +  ++  +L + +   P   +         D+ ++   +
Sbjct: 629 VSMDIL------NQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFENLRSVDKYMMVRLN 682

Query: 396 RVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVT 451
           + ++ IRE+  +          VI+   V     Y D  K     +   D +   +  V 
Sbjct: 683 QTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEAENDFQRRAMQTVF 742

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +    L  LL   +P  A +I+  L   +E
Sbjct: 743 YQTAVALTKLLTPIIPHTAEEIWSHLKEEEE 773



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 43  EGKPTFVLHDGPPYANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQV 102

Query: 62  AQNA------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
             N                 + +        R     L +S D      T    +     
Sbjct: 103 LTNKGIKRKEMSLAEYRKKCEEYALTQVDTQRADFKRLGVSGDWEHPYITLTPDYEAAEI 162

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K+++KG IYKG    ++S   E+   + E+              PV
Sbjct: 163 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYKDVKSPSIYVAFPV 212


>gi|124382713|ref|YP_001024595.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|238561164|ref|ZP_04609455.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|238525147|gb|EEP88576.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 1039

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 87/228 (38%), Gaps = 7/228 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K +I     +   Q H+GHA   ++AD  ARF R+ G +VL+TTG D  G     AA
Sbjct: 41  GRPKWFIVELPPFATGQLHMGHARNYVLADADARFRRMQGYNVLYTTGFDTFGLPTELAA 100

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRT--TEKRHHDTCRILWKKISDKGDIY 120
           + AG   +    + S         L + +D    T      ++   + ++ ++ + G  +
Sbjct: 101 REAGCAPERLARECSEAMAAQFVRLGLGHDSRRITQYHVPAYYRWVQWVFLRLFEAGHCF 160

Query: 121 KGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYY 180
           +      +  + E       V  G            V  + +  +F R S + D++L   
Sbjct: 161 RRDAPVAWCPQCEVTLAASLVDDG----RCWRCKRVVSTVVQPQWFVRESTFADEMLDGL 216

Query: 181 ESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIM 228
           +    +   +++ +      + GL+     R     G+ +  D    +
Sbjct: 217 DRLAGWPDEVKKIHRDWIGRREGLRLRLPVRGR-AHGLALHLDDAGWL 263


>gi|257873837|ref|ZP_05653490.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257808001|gb|EEV36823.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 931

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 24/271 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++                 +PAD+++ G D     F++    +  +
Sbjct: 518 KETDIMDVWFDSGSSHEAVLRQRP------ELTFPADMYLEGSDQYRGWFNSSITTSVAI 571

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D  
Sbjct: 572 NEVAPYKAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV-SSVDYEADVR 630

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCS 395
              D L      +  + +   +  ++  +L + +   P   +         D+ ++   +
Sbjct: 631 VSMDIL------NQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFENLRSVDKYMMVRLN 684

Query: 396 RVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVT 451
           + ++ IRE+  +          VI+   V     Y D  K     +   D +   +  V 
Sbjct: 685 QTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEAENDFQRRAMQTVF 744

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +    L  LL   +P  A +I+  L   +E
Sbjct: 745 YQTAVALTKLLTPIIPHTAEEIWSHLKEEEE 775



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQV 104

Query: 62  AQNA------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTCR 107
             N                 + +        R     L +S D      T    +     
Sbjct: 105 LTNKGIKRKEMSLAEYRKKCEEYALTQVDTQRADFKRLGVSGDWEHPYITLTPDYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K+++KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYKDVKSPSIYVAFPV 214


>gi|167764004|ref|ZP_02436131.1| hypothetical protein BACSTE_02387 [Bacteroides stercoris ATCC
           43183]
 gi|167698120|gb|EDS14699.1| hypothetical protein BACSTE_02387 [Bacteroides stercoris ATCC
           43183]
          Length = 945

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       EA+
Sbjct: 148 CNDEKKARPIEELTEAF 164



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 90/222 (40%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDTEAFKAWRPEYATAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+    YD  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLF---YDRT 780

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                    + +  L    ++++++  +++    + +++  +  V+E             
Sbjct: 781 GNYLVTDEAAGKEELKSLHKLIKKVTGDIEQFSYNTSISAFMICVNE------------- 827

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   S +     E++ QL + L  F P +  ++++ L 
Sbjct: 828 -------LSALKCSKKEILNQLTVTLAPFAPHVCEELWETLG 862


>gi|72162335|ref|YP_289992.1| valyl-tRNA synthetase [Thermobifida fusca YX]
 gi|90108446|sp|Q47NK0|SYV_THEFY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71916067|gb|AAZ55969.1| valyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 881

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 13/257 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
           DP  +M  W  +        G+  +PD    + +P DL   G+DI+     +    +   
Sbjct: 529 DPD-VMDTWATSSLTPQIAGGWESDPD-LFERVFPMDLRPQGQDIIRTWLFSTVVRSHFE 586

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP  K   S   +    +K+SKS GNV+ P+ ++E+   DA+RY+       G D  
Sbjct: 587 HDCLPWKKAAISGWILDPDRKKMSKSKGNVVTPLSMLEKYSSDAVRYW-AASGRLGTDTA 645

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQ 399
            D+  +K  +   LA  I N    ++S+  +D    +  P A TE  D S+L+V + V+Q
Sbjct: 646 LDEKQMK--IGRRLAIKILNASKFALSVAGED---TVADPAAVTEPLDRSMLAVLAEVVQ 700

Query: 400 EIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
           +           RAL +         D Y +  K       + + AS      +  +  L
Sbjct: 701 DATAAFHEYDHTRALERTERFFWNLCDDYLELVKARAYDPESREGASA-RAALLIALSVL 759

Query: 459 AILLQAFVPKLANKIFD 475
             L   F+P +  +++ 
Sbjct: 760 HRLFAPFLPFVTEEVWS 776



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K RE+++ I T     +   HIGH +     D +ARF R++G  V +  G D++G    +
Sbjct: 63  KSREEIFAIDTPPPTVSGSLHIGHVFSYTHTDTVARFQRMNGKSVFYPMGWDDNGLPTER 122

Query: 61  AAQN 64
             QN
Sbjct: 123 RVQN 126


>gi|310765126|gb|ADP10076.1| isoleucyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 938

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRK 212
           VQW+ + G     S   ++          + +P+     +  E +      L +    R 
Sbjct: 441 VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMALFVHKDTEQLHPDSLELMEKVAQRV 500

Query: 213 TFDWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               GI+   D                    + VW D+ +   +         G+     
Sbjct: 501 E-QDGIQAWWDLDARELMGADADNYVKVPDTLDVWFDSGSTSYSVVDERPEFGGNA---- 555

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
             D+++ G D     F +    +  +    P  + +     +  +G K+SKSLGN I P 
Sbjct: 556 -PDMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTISPQ 614

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           +V+ ++G D LR ++      G+      + LK+  ++         +  +   +L +  
Sbjct: 615 DVMNKLGADILRLWVASTDYSGE-IAVSDEILKRSADS------YRRIRNTARFLLANLA 667

Query: 375 GMIP-----TPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRY 427
           G  P      P      D   +S       +I  + +    H  + +++   S      Y
Sbjct: 668 GFNPETDKVKPEEMVVLDRWAVSRALAAQNDIVASYEAYDFHEVVQRLMQFCSVEMGSFY 727

Query: 428 FDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
            D  K  +   K +     +       +   L   +   +   A++ +  L
Sbjct: 728 LDIIKDRQYTAKADGLARRSCQTALWYIAEALVRWMAPIMSFTADEFWGYL 778



 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGYDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTTKV 71
            +        
Sbjct: 106 VEQTIGKPGE 115


>gi|255066104|ref|ZP_05317959.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049649|gb|EET45113.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 826

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 107/277 (38%), Gaps = 19/277 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 431 MDVWFDSGSTHYSVLK------QREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 484

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       G+     K+
Sbjct: 485 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGE-LAISKE 543

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
            LK+   +     I N +S  +   L D+D    T       E D   L +  ++ + + 
Sbjct: 544 ILKRVTES--YRRIRNTLS-FLFANLSDFDPFEHTVPQADMVEIDRYALVLARQLQERLA 600

Query: 403 -ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQL 458
            +       H A+  +++  SE     Y D  K      K +     +       + R L
Sbjct: 601 GDFYPRYAFHFAVKDIVAFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHITRSL 660

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +L+   +     + +DI+   +E+           P
Sbjct: 661 VLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPP 697


>gi|150019400|ref|YP_001311654.1| leucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189082993|sp|A6M268|SYL_CLOB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149905865|gb|ABR36698.1| leucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 816

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 79/231 (34%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY     +YP+  Q H GH +     D  AR  R+ G +V    G D  G      A 
Sbjct: 31  KKLYTLEMFSYPSGAQLHAGHWFNYGPTDSWARLKRMQGYNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  +    +N          +    ++++ + T    ++   + L+ K+ +KG  Y+
Sbjct: 91  KTGIHPQDSTLKNIETMEKQLKSMGAMFNWENEVVTCLPDYYKWTQWLFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G            V   +   +FF+++ Y D+LL   +
Sbjct: 151 KKAPVNWCPSCNTVLANEQVVDG----VCERCSTEVTKKDLTQWFFKITEYGDELLDKLD 206

Query: 182 SHPEFILPIERRNEVISFVKSG--LKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                      +   I           +  S   FD      D    + YV
Sbjct: 207 GLDWPEKTKSMQKHWIGRSYGAEVTFKVKDSDLKFDVFTTRVDTLNGVTYV 257



 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 94/277 (33%), Gaps = 45/277 (16%)

Query: 254 KFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKGEKISK 305
           K  P D +V G +    H +Y             L+ + P          +   G K+SK
Sbjct: 520 KMLPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMSK 579

Query: 306 SLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRS 365
           S GN I P + I+E G D  R +L+      + G +  DG+K        + I  ++   
Sbjct: 580 SKGNTISPDDYIKEYGADVFRMYLMFGFGYTEGGAWSDDGIKSV--GKFVDRIERILENC 637

Query: 366 VSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVD 425
            ++I  +         A  E +          ++ + E+      + A+A+++ L + ++
Sbjct: 638 RNIINSNESTKDSIDSAEKELNFW----KHNTIKGVTEDGDKMQFNTAIARLMELTNALN 693

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF------- 478
           +Y          K              E I     LL  F P  A + + +L        
Sbjct: 694 KYTQEN-----IKN--------ANFLKETIVDFIKLLAPFAPHFAEEQWSLLGNNSTIFN 740

Query: 479 -----------VADENRCFQSLDQRLKPGFMLHKTFD 504
                      V DE      ++ ++K   M+    D
Sbjct: 741 EKWPEFNPAALVKDEVEIAIQINGKIKAKIMVASNLD 777


>gi|302796623|ref|XP_002980073.1| hypothetical protein SELMODRAFT_153639 [Selaginella moellendorffii]
 gi|300152300|gb|EFJ18943.1| hypothetical protein SELMODRAFT_153639 [Selaginella moellendorffii]
          Length = 1155

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/448 (15%), Positives = 143/448 (31%), Gaps = 35/448 (7%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRHHDT 105
            D +G    K    +G   K          + M  +++      SY    R+     +  
Sbjct: 366 VDLNGNFTDKVTHFSGCHVKSADKDIIAMIKAMGRLVNSGSIRHSYPFCWRSETPLIYKA 425

Query: 106 CRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               + K+ +  D         Y     ++++ ++N  E  +            P+    
Sbjct: 426 VPSWFVKVEELRDRLLQNTAETYWVPDFVKEKRFHNWLENARDWAVSRSRFWGTPLPIWA 485

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  +     K L     H    +     +E+    K+G   L              
Sbjct: 486 SSDGEELVVVGSRKELEELSGHKATDIHRHFIDEITIPSKTGRGVLHR------------ 533

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPAFLL 280
                +   W ++ +       Y         K +P      G D  R +          
Sbjct: 534 --VDDVFDCWFESGSMPYAYIHYPFENRELFDKNFPGHFVAEGLDQTRGWFYTLMVLSTA 591

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KD 338
             + P  + +  +G +L   G+K+SK L N   P++V+ + G DALR +L+       + 
Sbjct: 592 LFDKPAFRNLICNGLVLAEDGKKMSKKLKNYPPPMDVVHDYGADALRLYLINSPVVRAEP 651

Query: 339 GFYDKDG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-----SDESI 390
             + K+G   + + V     N    LV  ++ + ++ +D  IP   +  +      D  I
Sbjct: 652 LKFRKEGVHAVVRDVFLPWYNAYRFLVQNALRLQVEGFDAFIPLDESKLDGSTNVLDRWI 711

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
            S    +++ +RE M    ++  +  ++  +  + + Y    +     +T        L 
Sbjct: 712 NSSTQSLVKFVREEMGAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRTGDHDCRVALS 771

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               V+     ++  F P     ++  L
Sbjct: 772 TLYSVLLTTCRVMAPFTPFFTEVLYQNL 799



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 20/165 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R +        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 37  EGRPEYVFYDGPPFATGLPHYGHILAGTIKDIVTRYQSAVGFHVTRRFGWDCHGLPVEHE 96

Query: 60  ----------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
                                     +  V + SR +      +   I ++   +T +  
Sbjct: 97  VDGLLGIKRREDVIQGMGIAEYNEQCRSIVMRYSREWEKTVVRMGRWIDFEKDYKTMDPE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++   ++K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 157 FMESVWWVFKQLFEKGLVYRGFKVMPYSTACTTPLSNFEANQNYK 201


>gi|239607239|gb|EEQ84226.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327351198|gb|EGE80055.1| isoleucyl-tRNA synthetase,cytoplasmic [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 1079

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 14/295 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + ++  W ++ +    +  Y         K +P D    G D     F+ +      L  
Sbjct: 519 EEVLDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLAVIGTHLYG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVS--MILKDYDGMIPTPGAFTES------DESILSV 393
            + G+K+ V   L   + N      +   +LK  + +        E+      D  IL+ 
Sbjct: 639 KESGVKEIVAKVLLP-LWNSYKFFEAQVALLKKVEEVEYVFDPAAEATNTNVMDRWILAS 697

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           C  +LQ + + M    ++  + +++ L+    + Y    +     +   D     L    
Sbjct: 698 CQSLLQFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRKRLKGELGLDDTLHALNTLF 757

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           EV+  L   L  F P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 758 EVLYTLVRGLAPFTPFITDNIYLRL-LPHIPKSLQAEDNRSVHFLPFPEVREELF 811



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRTPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R   D L   I +D+  +T +  +
Sbjct: 90  IDKALGMSGSEAVEKLGLEKYNAECRAIVMRFAAEWRQTIDRLGRWIDFDNDYKTMDTSY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG IY+G     YS       ++ E  +   
Sbjct: 150 MESLWWIVKQLFDKGVIYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|269926124|ref|YP_003322747.1| leucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789784|gb|ACZ41925.1| leucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 816

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 7/203 (3%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y      YP+ +  H+GH Y    AD   R+ R+ G +V    G D  G     
Sbjct: 41  ESKPKYYNLMEFPYPSGEGLHVGHVYTYSGADTNGRYRRMRGYNVFEPMGFDAFGIHSEN 100

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+   V   +    FR+  + L   +D    + T++  ++   + L+ ++   G 
Sbjct: 101 YALKLGINPMVLTQRTVSRFREQMNRLGCMWDWSHEVNTSQPNYYKWTQWLFLQMYKAGL 160

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +      +  +      +++V  G            V   E   +FF+++ Y ++LL+
Sbjct: 161 AVRKSAPVNWCPQCLTVLANEQVING----RCERCDTEVIQREMVQWFFKITDYAERLLN 216

Query: 179 YYESHPEFILPIERRNEVISFVK 201
             +      +    +   I   +
Sbjct: 217 DLDKLDWPEVSKRLQRNWIGRSE 239



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 45/269 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKA----KFWPADLHVIGKDILRFHAIYWPAF- 278
              +   ++D+   YL       +          K+ P D ++ GK+ +  H +Y     
Sbjct: 500 ETDVSDTFLDSSWYYLRYPSTEFDDRPFDRDITRKWLPVDSYMGGKEHIVLHHLYSRFVT 559

Query: 279 -------LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   L  + P   ++  HG I H G K+SKS GNV++P E IE+ G DALR +L+ 
Sbjct: 560 KVLYDLGYLEFDEPFT-RLRLHGIITHLGAKMSKSRGNVVNPDEYIEKYGADALRTYLLF 618

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D  +   G++         G+   ++R  S++   +D                 
Sbjct: 619 MGPYEDDNEFSVHGVQ---------GVSRFLNRLYSLVDSRHDYGNGPGVDM-------- 661

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +  R +  +   +++   H ++A ++ + +    +               R+       
Sbjct: 662 KMLHRTIDRVTRGIEDLKYHTSIAALMEMSN----WIADV-----------RSEMTKEQL 706

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVA 480
              ++ L ++L    P  A ++++ L  A
Sbjct: 707 DTALKNLVLMLAPIAPHTAEELWERLGGA 735


>gi|153010355|ref|YP_001371569.1| isoleucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151562243|gb|ABS15740.1| isoleucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 970

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 17/254 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +  T     +        WPAD+++ G D     FH+    +       
Sbjct: 569 ILDVWFDSGSTHTFTLEDRPDMK------WPADVYLEGSDQHRGWFHSSLLESCGTRGRA 622

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V     +   G+K+SKSLGN + P +VI+E G D LR +++      +D    K 
Sbjct: 623 PYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVMTTDY-WEDQRLGKS 681

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++   N D    + N +   +  +  D    +P      E +  +L   + + + +R  
Sbjct: 682 IIQ--TNIDAYRKLRNTIRWMLGTLAHDKGENLPY-ANLPELERLMLHRLTELDEVVRSG 738

Query: 405 MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAI 460
                  R    +I    V     YFD +K   L    P   R    L    E+   L  
Sbjct: 739 YDAFDFKRIARTLIDFMNVELSAFYFDIRKD-ALYCDAPSSVRRKAALQTVREIFDHLTT 797

Query: 461 LLQAFVPKLANKIF 474
            L   +P    + +
Sbjct: 798 WLAPMLPFTMEEAW 811



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 55/174 (31%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG  I   
Sbjct: 51  KDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWK 110

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDT 105
            +                      + F     +   +    L I  D     T    H  
Sbjct: 111 IEEKYRAEGKNKDEVPINEFRRECREFATNWIKVQTEEFKRLAILGDFENPYTTMNFHAE 170

Query: 106 CRILWKKIS--DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            RI  + +     G +Y+G     +S+ +     + EV              PV
Sbjct: 171 SRIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDVESDMIWVKFPV 224


>gi|269125944|ref|YP_003299314.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermomonospora curvata DSM 43183]
 gi|268310902|gb|ACY97276.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Thermomonospora curvata DSM 43183]
          Length = 846

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 69/350 (19%), Positives = 113/350 (32%), Gaps = 19/350 (5%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE----SHPEFIL 188
           E                     N V+ +  +    R   +      +Y       P +  
Sbjct: 406 EQLLARGRELSWHPPYMRARYENWVEGLNGDWLISRQRFFGVPFPVWYPLDSDGEPRYDR 465

Query: 189 PIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP 248
           PI    E++    S       S            DP  +M  W  +        G+  +P
Sbjct: 466 PIVPPEEMLPIDPSSDVPPGYSEDQRGKPDGFIGDPD-VMDTWATSSLTPQVAGGWESDP 524

Query: 249 DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
           D   A+ +P DL   G DI+     +    + L   +LP      S   +    +K+SKS
Sbjct: 525 D-LFARVFPYDLRPQGHDIIRTWLFSTVLRSHLEHDSLPWRNAALSGWILDPDRKKMSKS 583

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
            GNVI P+ ++ E G DA+RY+       G D  ++   +K  V   LA  I N     +
Sbjct: 584 KGNVITPMGLLVEHGSDAVRYW-AASARPGTDTAFEVKQIK--VGRRLATKILNASRFVL 640

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVD 425
            +       + P        D S+L+    V+ E  E        RAL +         D
Sbjct: 641 GL-----GEVAPDAAITEPVDLSMLAALREVVAEATEAFDGYDHARALERTERFFWYFCD 695

Query: 426 RYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            Y +  K           A +        +  L  L    +P +  +++ 
Sbjct: 696 DYLELVKQRAY--GEGAGADSARAALRTALSVLLRLFAPILPFVTEEVWS 743



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 8/116 (6%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H+GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 45  FAIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMRGRAVFYPMGWDDNGLPTERRVQNYF 104

Query: 65  ----AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDK 116
                         +      D    + IS  +FI    +R        ++ +  +
Sbjct: 105 GVRCDPSLPYDPDFEPPAE-PDPKKQVPISRRNFIELC-ERLTAIDEKAFEDLWRR 158


>gi|307709597|ref|ZP_07646050.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619633|gb|EFN98756.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L +             +  ++  ++ +     PT            D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPTQDVVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVRRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|153956201|ref|YP_001396966.1| leucyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856526|ref|YP_002473648.1| hypothetical protein CKR_3183 [Clostridium kluyveri NBRC 12016]
 gi|189082994|sp|A5N399|SYL_CLOK5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146349059|gb|EDK35595.1| LeuS [Clostridium kluyveri DSM 555]
 gi|219570250|dbj|BAH08234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 811

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 9/234 (3%)

Query: 2   KEREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K  +KLY     +YP+    H GH +     D  AR  R+ G +V    G D  G     
Sbjct: 26  KSSKKLYTLEMFSYPSGSNLHAGHWFNYAPVDSWARMKRMQGYNVFQPMGFDAFGLPAEN 85

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G+  K   ++N          +    ++++ + T    ++   + L+ ++     
Sbjct: 86  YAIKTGIHPKDSTEKNIDTMEKQLKSMGAMFNWENEVVTCRPDYYKWNQWLFLQLYKHDL 145

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
            Y+      +         +++V +G            V   +   +FF+++ Y ++LL 
Sbjct: 146 AYRKNAPVNWCPSCNTVLANEQVKEGE----CERCGTEVTKKDLTQWFFKITDYTEELLK 201

Query: 179 YYES--HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
             ++   PE    ++R     S        ++ S   F+      D    + YV
Sbjct: 202 DLDNIDWPEKTKAMQRHWMGKSTGTDVTFKVADSDIKFNVFTTRVDTLFGVTYV 255



 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 110/314 (35%), Gaps = 39/314 (12%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA- 253
            + F   G   L  S +  +    I  +P           + +      Y DN +  KA 
Sbjct: 448 NVQFSPDGKSPLLKSEEFMNTTCPICGEPAKREADTLDTFVCSSWYYLRYADNKNTEKAF 507

Query: 254 ------KFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHK 299
                 K  P D++V G +    H +Y             L+ + P          +   
Sbjct: 508 DKDKINKLLPVDMYVGGPEHACMHLLYARFITKALRDMGFLNFDEPFLSLRHQGLILGPD 567

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN I P + I++ G D  R +L+      + G ++ DG+K            
Sbjct: 568 GQKMSKSKGNTISPDDCIQKYGSDVFRMYLMFGFDYAEGGAWNDDGIKSMS------KFV 621

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + + R V  I +  +       +   +++ +    +  ++ + E+      + A+A+++ 
Sbjct: 622 DRIERIVGNIKELINSGKNFKNSMDAAEKELNYSRNYSIKSVSEDAGKFQFNTAIARIME 681

Query: 420 LVSEVDRYFDA-QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + + +Y     K   L K                I     ++  F P  A + +++L 
Sbjct: 682 FTNSLYKYIQEDTKNISLLKD--------------TILDFIKIIAPFAPHFAEEQWEVLG 727

Query: 479 --VADENRCFQSLD 490
              +  N  +   D
Sbjct: 728 QKYSIFNEKWPEFD 741


>gi|325281266|ref|YP_004253808.1| leucyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313075|gb|ADY33628.1| leucyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 923

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D +G    + 
Sbjct: 29  SKPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLKGFNVLHPMGFDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDK 116
           A   G    +  ++N   +R+  D +  S+  D  +RT + +++   +  + ++ + 
Sbjct: 89  AIQTGQHPAITTEKNIARYREQLDKIGFSFDWDREVRTCDPKYYKWTQWAFIQMFNH 145



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 91/238 (38%), Gaps = 39/238 (16%)

Query: 258 ADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS+ NV++P ++
Sbjct: 655 VDVNIVKNDILDTEAFRKWMPDYADAEFILEDGKYICGWAVE---KMSKSMFNVVNPDDI 711

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           IE+ G D LR + +          +D  G+         +G+   + +   + L   +  
Sbjct: 712 IEQFGADTLRLYEMFLGPLEAHKPWDTQGI---------DGVYKFLRKFWRLFLNGEEFS 762

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +       E     L V  + L++I  +++N   + ++   +   +E             
Sbjct: 763 VSDEVPTKEE----LKVLHKTLKKIEFDIENFSFNTSIPAFMICTNE------------- 805

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQSLDQR 492
                   + +      ++  L + +  + P +A +++ +L  A+      F   +++
Sbjct: 806 -------LAALKCNKRAILEPLVVAIAPYAPHIAEELWHLLGHAESVTGATFPQWEEK 856


>gi|325299389|ref|YP_004259306.1| leucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318942|gb|ADY36833.1| leucyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 944

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+  D  +RT + +++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTQNNINRYREQLDKIGFSFDWDREVRTCDPKYYHWTQWAFQKMFNSFY 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       E +
Sbjct: 148 CNTCGKAQPIEKLIEHF 164



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 98/237 (41%), Gaps = 38/237 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVTNDVLDIEAFKNWRPEYHDAEFILEDGKYICGWAVE---KMSKSMYNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  ++        
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYGRQGEF 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +PT    T+ +   L    ++++++  +++    + +++  +  V+E+           L
Sbjct: 784 LPTESEATKEE---LKSIHKLIKKVTGDIEVFSYNTSISAFMICVNELT---------AL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADE--NRCFQSLDQ 491
           K  N             V+  L ILL  F P LA ++++ L       +  + + ++
Sbjct: 832 KSRNKA-----------VLTDLVILLAPFAPHLAEELWEALGHGTTVCDAQWPAWNE 877


>gi|311064721|ref|YP_003971446.1| isoleucyl-trna synthetase IleS [Bifidobacterium bifidum PRL2010]
 gi|310867040|gb|ADP36409.1| IleS Isoleucyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 1107

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 18/298 (6%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            ++  +  + +L+        G         ++  W ++ +       Y         + 
Sbjct: 545 NVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQH 604

Query: 256 WPADLHV--IGKDILRFHAIYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVID 312
           +PAD  V  IG+    F+ ++  A  L  + P  K V  HG +L   G+K+SK L N  D
Sbjct: 605 FPADYIVEYIGQTRGWFYLLHVMATALF-DRPAFKNVICHGIVLGSDGQKMSKHLRNYPD 663

Query: 313 PIEVIEEVGVDALRYFLVREIACGK-DGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
              V ++ G DA+R+FL+        +     +G++  V   +     +    ++     
Sbjct: 664 VNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAA 723

Query: 372 D----YDGMIPTPGA---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-E 423
           +    +D             E D  +L+   R+++ + +++    I  A       +   
Sbjct: 724 NGGAGFDARQLRADEVAGLPEMDRYLLARTRRLVERVEKSLDEFAISDACDAASDFIDVL 783

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
            + Y    +     K +             V+     +L    P  +  ++  L   +
Sbjct: 784 TNWYIRNTRD-RFWKEDV----NAFNTLYTVLEVFMRVLAPLAPMESESVWRGLTGGE 836



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 23/155 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             + N  PH GH       DV+ R+  + G  V    G D HG      AQ         
Sbjct: 68  PPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVD 127

Query: 66  --------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWK 111
                           +   +  +        A  +D  ++   +T    + ++    +K
Sbjct: 128 QIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVD--FEHGYKTLNIPYMESVMWAFK 185

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++ +KG  Y+G     Y  +D+   +  E+   AD
Sbjct: 186 QLYEKGLAYQGYRVLPYCPKDQTPLSAHELRMDAD 220


>gi|119774061|ref|YP_926801.1| isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229766|sp|A1S425|SYI_SHEAM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119766561|gb|ABL99131.1| Isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 940

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/403 (15%), Positives = 124/403 (30%), Gaps = 44/403 (10%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
                 +   +      R    +      +G      +   N  QW+ + G     +   
Sbjct: 402 YRHSYPHCWRHKTPIIFRATPQWFISMDNQGLRSTALSEIQN-TQWIPDWGQSRIETMVA 460

Query: 174 DKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ---- 225
           ++          + +P    + + NE +      L +   +R     GI+   D      
Sbjct: 461 NRPDWCISRQRTWGVPITLFVNKENEELHPNSVSLMERVANRIE-QHGIQAWWDLDAAEL 519

Query: 226 ------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
                         + VW D+ + + T         G        DL++ G D     F 
Sbjct: 520 LGDEAEQYRKVTDTLDVWYDSGSTFETVVAARPEFQGHG-----VDLYLEGSDQHRGWFM 574

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +  + A  P  + +     +  KG K+SKS+GNVI P EV  ++G D LR ++  
Sbjct: 575 SSLMLSTAMHAKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQEVTNKLGADILRLWVAA 634

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTES 386
                    Y  +        + A      +  +   +L + +G  P             
Sbjct: 635 -------TDYSGEMSVSDEILNRAADSYRRIRNTGRFLLANLNGFEPEADMVAVADMVAL 687

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDR 443
           D  ++   ++V  EI    +    H    +++   S      Y D  K  +   K     
Sbjct: 688 DRWMVRRAAKVQSEIIAAYEQYNFHLVTHKLMQFCSVELGSFYLDIIKDRQYTAKRESHA 747

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +       +   +   +   +   A++I+ +L    E   F
Sbjct: 748 RRSCQSALFHIAEAMVRWIAPVLSFTADEIWQLLPGKREAYVF 790



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GRKPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTLAGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDMADV-LDISYDDFIR 96
           +        K+   +     R  A   +D   +DFIR
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAAQVDGQREDFIR 143


>gi|325129574|gb|EGC52398.1| isoleucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 929

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 106/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +  +       H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELVKKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|323449511|gb|EGB05399.1| hypothetical protein AURANDRAFT_54702 [Aureococcus anophagefferens]
          Length = 1316

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/416 (15%), Positives = 117/416 (28%), Gaps = 82/416 (19%)

Query: 133 EAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIER 192
           + Y +     K A     N +   +  M E+ +       ++           +   I  
Sbjct: 584 QWYVDCSGPAKRACDAVRNGELRILPKMHEKTW---FQWLENIRPWCISRQLWWGHRIPA 640

Query: 193 RNEVISFVKSGLKDLSLSRKTFDW--------------------GIKIPDDPQYIMYVWI 232
                     GL D++       W                     +++  D   ++  W 
Sbjct: 641 WFAFYKGEDRGLVDMNSEANKPRWIVARDEAEALAKAKATLGRSDVELQRDED-VLDTWF 699

Query: 233 DALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKV 290
            +     +  G+ D      A F+P  L   G DIL F    +      L+  LP     
Sbjct: 700 SSGLFPFSVFGWPDKTPELDA-FYPTQLLETGLDILFFWVARMVMMGLQLTDKLPFTDVY 758

Query: 291 FSHGFILHKGEKISKSLGNVIDPIEV---------------------------------- 316
                   +G K+SKSLGNVIDP+EV                                  
Sbjct: 759 LHAMVRDKEGRKMSKSLGNVIDPLEVIDGCELEQLVGKLKGGNLKATEVAKATKAFEDDF 818

Query: 317 ---IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
              +   G DALR  L+     G+D   D   +             N +  +V  +L  +
Sbjct: 819 PDGMPRCGTDALRVGLLAYTVQGRDINLDIKRVIG------YRSFCNKLWNAVRFMLGCF 872

Query: 374 DGMIPTPGAFTES----------DESILSVCSRVLQEIRENMQNQLIHRALAQVISLV-- 421
           DG       + +           D+ +LS    ++  +  ++        +  + +    
Sbjct: 873 DGYAAAETIWADLAAARGRLAGRDKFVLSKLHGMVAAVDAHLTGYCFGDCVQAIYAFFLN 932

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              D Y +  KP           +         +      L    P +  +++  L
Sbjct: 933 DLCDVYVELVKPVVYGDDKTSDPTLAKMALWCCLDAGLRCLHVMCPFVTEELWQRL 988



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 24/163 (14%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + EK  I           H+GHA    I D L R+HR+ G   L+  GTD  G       
Sbjct: 222 DSEKFVIVIPPPNVTGSLHLGHALTAAIEDCLTRWHRMRGHATLYVPGTDHAGIATQSVV 281

Query: 63  QN---AGVTT-------------KVFVD------QNSRNFRDMADVLDISYDDFIRTTEK 100
           +                      +V+        +     R +   +D S + F  T + 
Sbjct: 282 EKQLAKQNPPVSRHDLGRDKFLEQVWAWKGEYGGKICNQLRRLGSSVDWSRERF--TMDD 339

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           R        + +  D G +Y+      +S   ++  +D EV  
Sbjct: 340 RCAKAVTEAFVRFHDAGIMYRASRLVNWSCALKSAISDLEVDH 382


>gi|261200837|ref|XP_002626819.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239593891|gb|EEQ76472.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 1079

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 14/295 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + ++  W ++ +    +  Y         K +P D    G D     F+ +      L  
Sbjct: 519 EEVLDCWFESGSMPYASQHYPFENKEQFEKSFPGDFIAEGLDQTRGWFYTLAVIGTHLYG 578

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
            LP    V +   +   G+K+SK L N  DP  +++  G D LR +L+       +   +
Sbjct: 579 KLPFKNCVVNGIVLAEDGKKMSKRLKNYPDPTLIMDRYGSDPLRLYLINSPVVRAEPLRF 638

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVS--MILKDYDGMIPTPGAFTES------DESILSV 393
            + G+K+ V   L   + N      +   +LK  + +        E+      D  IL+ 
Sbjct: 639 KESGVKEIVAKVLLP-LWNSYKFFEAQVALLKKVEEVEYVFDPAAEATNTNVMDRWILAS 697

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVSE-VDRYFDAQKPWELKKTNPDRASTVLYVTV 452
           C  +LQ + + M    ++  + +++ L+    + Y    +     +   D     L    
Sbjct: 698 CQSLLQFVNQEMAGYRLYTVVPRLLGLIDNTTNWYIRFNRKRLKGELGLDDTLHALNTLF 757

Query: 453 EVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDPIF 507
           EV+  L   L  F P + + I+  L +    +  Q+ D R        +  + +F
Sbjct: 758 EVLYTLVRGLAPFTPFITDNIYLRL-LPHIPKSLQAEDNRSVHFLPFPEVREELF 811



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R          +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 30  RGRTPYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGRYVERRFGWDTHGVPIEYE 89

Query: 60  ---------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +      +  V + +  +R   D L   I +D+  +T +  +
Sbjct: 90  IDKALGMSGSEAVEKLGLEKYNAECRAIVMRFAAEWRQTIDRLGRWIDFDNDYKTMDTSY 149

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++   + K++ DKG IY+G     YS       ++ E  +   
Sbjct: 150 MESLWWIVKQLFDKGVIYRGYRVMPYSTALNTPLSNFEAQQNYK 193


>gi|327473395|gb|EGF18815.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVVVNRSELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V +  G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKHFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILGQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +V+ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DVLVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        ++    L +S D      T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|300773858|ref|ZP_07083727.1| leucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760029|gb|EFK56856.1| leucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 927

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 8/181 (4%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           +++ K Y+     YP+    H+GH    I +D+ +R+ R  G +VL   G D  G    +
Sbjct: 28  QDKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIFSRYKRSKGFNVLHPMGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +  + N   +R+  D +  SYD    IRT+E  ++   + ++ ++ +   
Sbjct: 88  YAIQTGQHPAITTEANINRYREQMDNIGFSYDWSREIRTSEPDYYKWTQWIFMQLFNSWY 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +   +       E + N      G+ G       + +++  +E   F     Q +LL 
Sbjct: 148 NNELDKAVSIDTLVEHFEN-----VGSKGINAVCDEDILEFTADEWKGFDEEKQQRELLK 202

Query: 179 Y 179
           Y
Sbjct: 203 Y 203



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 121/362 (33%), Gaps = 49/362 (13%)

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQ 173
               D Y+   S        ++Y     Y         A    V + +    +   S + 
Sbjct: 529 WKYEDQYEYELSTMPGWAGSSWY--WFRYMDPQNADAFASKEAVAYWKAVDLYIGGSEHA 586

Query: 174 DKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWID 233
              L Y     +F+  I   NE   F K   + +   R  F + I   +      +V   
Sbjct: 587 TGHLLYSRFWNKFLKDIGYHNEEEPFKKLINQGMIQGRSNFVYRILDEEGRGTNQFV--- 643

Query: 234 ALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLSANLPLPKKVFSH 293
              +Y     Y              D++++  DIL     +       A+     +    
Sbjct: 644 ---SYGLKEQYKTIALH-------VDVNIVVNDILNLEK-FRQFRPDFADAEFILE-NGK 691

Query: 294 GFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNAD 353
                + EK+SKS  NV++P ++I+  G D LR + +      +   ++ +G++      
Sbjct: 692 YHCGAEVEKMSKSKFNVVNPDDIIDTYGADTLRLYEMFLGPLEQAKPWNTNGIEG----- 746

Query: 354 LANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRA 413
                   V R       ++     TP       ++      ++++++ ++++    + +
Sbjct: 747 -VYKFLKKVWRLFHDTEGNFHVSDETPV------KAEYKALHKIIRKVEDDIERFSFNTS 799

Query: 414 LAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKI 473
           ++  +  V+E                     + +      ++ QL ++LQ + P +A ++
Sbjct: 800 VSAFMICVNE--------------------LTELKCNKRAILEQLIVVLQPYAPHIAEEL 839

Query: 474 FD 475
           + 
Sbjct: 840 WS 841


>gi|28870142|ref|NP_792761.1| hypothetical protein PSPTO_2964 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853388|gb|AAO56456.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 494

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 130/387 (33%), Gaps = 40/387 (10%)

Query: 10  STAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVT 68
           +     PN   HIGH A   + ADV  R  R  G D +  + +D++   + +     GV 
Sbjct: 2   TITPPTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLEQGVD 61

Query: 69  TKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----DIYKG 122
             V   +NS         ++I  D+++R        +    ++  + D G     D  + 
Sbjct: 62  PVVLAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFTALRDAGAIEFRDSSEP 121

Query: 123 CYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQWMEEE 163
                     EA+      Y G                     G +      P QW    
Sbjct: 122 YCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQPSQWKTAH 181

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             F +L+ ++ +L +                  +      L D  ++R   D G+ +  D
Sbjct: 182 RAFLKLADFKPQLGNRLLGQAWRKPLDSW----LRDTLEHLHDWGVTRPG-DGGLDLQAD 236

Query: 224 PQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHAIYWP 276
               ++ W   L  Y+       +         ++W +     +H +G D +  HAI +P
Sbjct: 237 GACRVHTWFMGLAGYMAAFREYADSIGRPELFGQYWQSGQGTLVHFLGFDCVFSHAIVYP 296

Query: 277 AF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
           A   +   + + ++   + F+   G  +S S  + I   ++  +   D+ R +L      
Sbjct: 297 AQLSVLQGIKVRQRFVPNQFLKLDGLNLSTSRNHAIWVGDLARQACADSARLYLASIAPE 356

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLV 362
             +G +      +    +L NG    +
Sbjct: 357 DSEGDFRMTHFFE-WREELFNGFFPAL 382


>gi|297183629|gb|ADI19755.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 938

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 116/414 (28%), Gaps = 45/414 (10%)

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYY 150
            DD +     R    C   ++         +      +    + +     +    +G   
Sbjct: 378 NDDIVAALADRQRLLCHEPFEHSYPHCW--RHKTPIIFRATPQWF-----ISMMGNGLLS 430

Query: 151 NAQHNP--VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
            AQ     VQW+ + G     S   D+          + +PI      ++          
Sbjct: 431 AAQAAVEGVQWIPDWGRARIDSMLADRPDWCISRQRTWGVPITLFIHKVTGEIHPNTLAL 490

Query: 209 LSRKTF---DWGIKIPDDPQ----------------YIMYVWIDALTNYLTTTGYLDNPD 249
           ++         GI    D                    + VW D+   +           
Sbjct: 491 MASVAELIEQGGIDAWFDLDPAELLQADADQYEKVTDTLDVWFDSGVTHDCVLR------ 544

Query: 250 GSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSL 307
                 WPADL++ G D     F +       +    P    +     +   G K+SKSL
Sbjct: 545 QRDTLDWPADLYLEGSDQHRGWFQSSLLTGVAIHQGAPYRSVLTHGFTVDGDGRKMSKSL 604

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GN+I   + ++E+G D LR ++       +           +  AD    I N   R + 
Sbjct: 605 GNIIPAGKAMQELGADVLRLWVSAADYRNE---ISASDEIFKRTADAYRRIRNTA-RFLL 660

Query: 368 MILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--E 423
             L  +D              D  IL     +  EI    +    H    +V +  S   
Sbjct: 661 ANLAGFDPERDCLPTEQLLPLDRWILEQAHELQAEICSAYEQYQFHHVYHRVHNFCSGEL 720

Query: 424 VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
              Y D  K  +           +       +   L   +   +   A +I++ 
Sbjct: 721 GGFYLDIIKDRQYTTGAESMARRSAQTSLYHLAEALCRWIAPILSFTAEEIWEN 774



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 68/206 (33%), Gaps = 16/206 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++    +     Y N Q H+GHA   I+ D++ +   L G +  +  G D HG  I   
Sbjct: 46  KDKPTFILHDGPPYANGQLHVGHAINKILKDIIIKSKTLSGFNAPYVPGWDCHGLPIELN 105

Query: 62  AQNAGVTT--KVFVDQNSRNFRDMA-DVLDISYDDFIR------------TTEKRHHDTC 106
            +        KV   +  ++ RD A   ++    DF+R            T +       
Sbjct: 106 VEKKVGKPGHKVSPAEFRQHCRDYARKQVEAQKTDFMRMGVLGDWQNPYLTMDSALEANV 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                 I ++G + +G     + L   +   + EV              P   +EE G  
Sbjct: 166 VRALANIVEQGHLQRGFKPVHWCLDCGSALAEAEVEYRDKQSSAVDVLFPFVDVEEAGKR 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
               A          +   + LP  R
Sbjct: 226 LDC-AADHASGVVIWTTTPWTLPANR 250


>gi|302036441|ref|YP_003796763.1| isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604505|emb|CBK40837.1| Isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 939

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 85/476 (17%), Positives = 150/476 (31%), Gaps = 33/476 (6%)

Query: 18  AQPHI--GHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQ 75
              HI  GH  E  +  +        G  +      D  G+  A   + AG        +
Sbjct: 334 GCVHIAPGHGMEDYLLVLDHNAKASVGERLEILAPVDNGGKFTAAVPEFAGQHVFKANPK 393

Query: 76  NSRNFRDMAD-----VLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
                ++         L+ SY    R  +          +  +       +         
Sbjct: 394 IVERLKENGRLLGHGSLNHSYPHCWRCKQPVIFRATEQWFVSMETNELRKEALAEIERVR 453

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
              AY  D     G      +   +  +        F        L           L I
Sbjct: 454 WIPAYGRDR--INGMIENRPDWCLSRQRVWGTPIPGFTCVKCGKVLAHPRVIDHVADL-I 510

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDG 250
            +      F       L    +    G    +  + I+ VW ++  +Y            
Sbjct: 511 GQHGTDYWFANQAAALLPDGTQCEGCGEAEFEKERDILDVWFESGVSYAAVL-------- 562

Query: 251 SKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHK-GEKISKSL 307
              +++PADL++ G D     FH+      +     P  K V +HGF+L   G K+SKS 
Sbjct: 563 KSRQWYPADLYLEGSDQHRGWFHSALLAGVITDHRAPY-KAVLTHGFVLDGAGRKMSKSA 621

Query: 308 GNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS 367
           GNV+ P +VI++ G + LR ++       +D    ++ L      +    I N   R + 
Sbjct: 622 GNVVAPQDVIKQSGAEILRLWV-SAQDYREDLRISQEIL--NHLIEAYRKIRNTC-RFLL 677

Query: 368 MILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSE 423
             L D+D            E D   L     ++  +R+       H     + +   V  
Sbjct: 678 SNLYDFDPAQHRVPFEQLPELDRWALMRLGDLVPRVRKGYDEFEFHTIFHALNNFCSVDL 737

Query: 424 VDRYFDAQKP--WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
              Y D  K   +  +K +P R  +   V  +++  L  L+   +   A +I+ +L
Sbjct: 738 SAVYLDILKDRLYTFRKDSPLRRGS-QTVLFDILVALTKLMAPVLSFTAEEIWRML 792



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
            +  +     Y N + HIGHA   I+ D++ +   + G  V +  G D HG  I      
Sbjct: 48  PRYVLHDGPPYANGRIHIGHALNKILKDIIIKSKTMSGYQVPYVPGWDCHGLPIEHQVLK 107

Query: 65  AGVT-------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                             K + ++     R+    L +   +     T    +  T    
Sbjct: 108 ELGDKKRDLDALAIRKLCKEYAEKYVSIQREEFQRLGVLGEWQQPYLTLNPAYEGTIIRE 167

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
           + +  ++G +YKG     +  +D+    + EV   
Sbjct: 168 FGRFVERGGVYKGLKPVLWCTQDQTALAEAEVEYD 202


>gi|240277099|gb|EER40609.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 401

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 83/233 (35%), Gaps = 26/233 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK Y+ +   YP+   H+GH     I+DVLARF  + G DVL   G D  G     AA
Sbjct: 62  GKEKAYVLSMFPYPSGALHLGHVRVYTISDVLARFKHMKGYDVLHPMGWDAFGLPAENAA 121

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
              G+    +  QN  N ++    +   +D                 W +    G  Y+ 
Sbjct: 122 IERGIDPAKWTMQNIANMKEQLRAIGARFD-----------------WDRELMTGTAYQQ 164

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
                 S       N+     G            V+ +E + +FFR++A+++ LL   ES
Sbjct: 165 KLESIRSDDKTVLANEQVDANG----CSWRSGAKVEKLELKQWFFRITAFKEALLKDLES 220

Query: 183 HPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDAL 235
                L       V+S  K  L   S +   F       +    +     D L
Sbjct: 221 -----LEAGWPERVLSMQKHWLGKSSGAHIKFLVSAPDDNYDIQVFTTRPDTL 268


>gi|225181686|ref|ZP_03735126.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167667|gb|EEG76478.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 914

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 19/279 (6%)

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           T   G         IM VW D+ + ++       +         PADL++ G D     F
Sbjct: 515 TCGCGHNEFRKESDIMDVWFDSGSTHVAVLETNPDLTS------PADLYLEGSDQYRGWF 568

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
            +    +       P    +     +  +G+K+SKSLGNV+ P  +I++ G D LR ++ 
Sbjct: 569 QSSLLTSVATRDRAPYKSTLTHGWVVDGEGKKMSKSLGNVVAPEHIIKQYGADILRLWV- 627

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDES 389
                  D    +D LK+   A++   I N +   +             +  A  E D  
Sbjct: 628 SSTDFRSDVRVSQDILKQL--AEVYRKIRNTIRYMLGNCHDFNPQAHALSYDALDELDRY 685

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR---A 444
            L     +++ +     +   H     + +   +   + Y D  K      T+P      
Sbjct: 686 ALHRLQVLVERVSGAYDDFEFHVVFHAIHNFCVIEMSNFYMDVLKDRLY--TSPAASPGR 743

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +   V  E++  L  L+   +   + +++  L    E 
Sbjct: 744 RSAQTVMHEILVTLTKLIAPVLTFTSEEVWGYLPGEKEE 782



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +EK  +     Y N   H+GHA   ++ D++ +   + G D  +  G D HG  I   
Sbjct: 48  QGKEKYVLHDGPPYANGDIHMGHALNKVLKDIIVKHKSMSGFDSPYVPGWDTHGLPIEHQ 107

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + +  +     R+    L +   +D+   T +       
Sbjct: 108 VVKKGKVKRNEVTPLEFRRHCRDYALRFLDIQREQFKRLGVRGDWDNPYVTLKPEFEARQ 167

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ ++++KG IYKG     +  + E    + E+  
Sbjct: 168 IEVFGEMANKGYIYKGLKPVHWCPQCETALAEAEIEY 204


>gi|213053363|ref|ZP_03346241.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 502

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 22/269 (8%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+ +       Y       +     AD+++ G D     F +    +  +    P
Sbjct: 91  LDVWFDSGSTS-----YSVVDARPEFAGHAADMYLEGSDQHRGWFMSSLMISVAMKGKAP 145

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +  +G K+SKS+GN + P +V+ ++G D LR ++      G+    D+  
Sbjct: 146 YRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDE-- 203

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDESILSVCSRVLQE 400
           + KR     A      +  +   +L + +G  P      P      D   +       QE
Sbjct: 204 ILKR-----AADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVLDRWAVGCAKTAQQE 258

Query: 401 IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQ 457
           I +  +    H  + +++   S      Y D  K  +   K +     +       +   
Sbjct: 259 ILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEA 318

Query: 458 LAILLQAFVPKLANKIFDILFVADENRCF 486
           L   +   +   A++I+  L    E   F
Sbjct: 319 LVRWMAPIMSFTADEIWGYLPGEREKYVF 347


>gi|301794641|emb|CBW37092.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 930

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|83648575|ref|YP_437010.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726271|sp|Q2S9T9|SYI_HAHCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83636618|gb|ABC32585.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 941

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 70/462 (15%), Positives = 143/462 (30%), Gaps = 41/462 (8%)

Query: 52  DEHGQK---IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
           D+ G     +   A          V +  +    +     I  SY    RT     +   
Sbjct: 362 DDRGVYRDNVELFAGEHVYKVDDHVIEVLKERGRLLSHGKITHSYAHCWRTKTPLIYRAT 421

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
              +  +  +G               E          G +      + +P  W       
Sbjct: 422 PQWFISMDKQGLR--------DQALAEIKLVRWVPSWGQNRIEAMIEQSP-DWCISRQRT 472

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
           + +           E HP+    +E   + +   K+G+            G    +  + 
Sbjct: 473 WGVPIAFFVHKETQELHPDTARLVEEVAKQVE--KTGIDAWWDINAEDLLGADAQNYEKV 530

Query: 226 -YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
              + VW D+   +             +   +PADL++ G D     F +    A  +  
Sbjct: 531 TDTLDVWFDSGVTHSAVLE-----QREELGQFPADLYLEGSDQHRGWFQSSLKTAVAIKG 585

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P  + +     +  KG K+SKSLGN I+P EV+ ++G D LR ++           Y 
Sbjct: 586 KAPYRQVLTHGFTVDEKGHKMSKSLGNGIEPQEVMNKLGADILRLWVAA-------TDYS 638

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSVCSRV 397
            + +  +   +        +  +   +L + +   P             D  I+     +
Sbjct: 639 AEMVLSKNILERTADSYRRIRNTSRFLLANINDFDPVKDMVAMDDLLALDRWIVDRAWLL 698

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEV 454
            +E+++  +     +   +V +  S      Y D  K  +   K +     +       V
Sbjct: 699 QEELKKAYEQYNFVQVYQKVHNFCSVELGSFYLDVIKDRQYTMKLDSLGCRSAQTAQYHV 758

Query: 455 IRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQRLKP 495
           I  L   +   +   A +I+  +     E+   ++  + L+P
Sbjct: 759 IEALVRWIAPILSFTAEEIWSYIPGQRAESIFLETFYEGLQP 800



 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 13/106 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K REK  +     Y N   H+GHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGREKFILHDGPPYANGNIHLGHAVNKILKDIIVKSKTVAGYDAPYVPGWDCHGLPIEHK 105

Query: 62  AQ-------------NAGVTTKVFVDQNSRNFRDMADVLDISYDDF 94
            +                   + +  +     R+    L +  D F
Sbjct: 106 VETMIGRAGDKVGYKEFRRKCREYALEQVAKQREDFIRLGVFGDWF 151


>gi|319786583|ref|YP_004146058.1| isoleucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465095|gb|ADV26827.1| isoleucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 948

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 98/282 (34%), Gaps = 24/282 (8%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 548 ILDVWFDSGVTHEAVLL-------ERGLGKPADLYLEGSDQHRGWFQSSLLTGVAIDKAA 600

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKSLGN I+P ++++ +G D LR ++       +     ++
Sbjct: 601 PYRQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLGADILRLWIASADYSNEMS-LSQE 659

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    I N   R +   L  ++              D  I+     V ++++
Sbjct: 660 ILKR--NADAYRRIRNTA-RFLLANLHGFEPARDLRPLEDMVALDRWIVHRAWEVQEKVK 716

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
              +       +  +++   V     Y D  K          R   +       +     
Sbjct: 717 AAYERYDFAGIVQALLNFCSVDLGSLYLDVTKDRLYTMGEDSRGRRSAQSAMYRIAEAFV 776

Query: 460 ILLQAFVPKLANKIFDIL------FVADENRCFQSLDQRLKP 495
             +   +   A++++  L         +EN  F +  + L P
Sbjct: 777 RWIAPVLSFTADELWGYLPKDTADGQREENVLFATWYEGLAP 818



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R    +     Y N   H+GHA   I+ D++ +   L G D  +  G D HG  I  A
Sbjct: 47  KGRPLFVLHDGPPYANGAIHLGHAVNKILKDIIVKSRHLAGFDAPYIPGWDCHGLPIEIA 106

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        R     L +   +D+  ++ + R     
Sbjct: 107 IEKKYGKVGVKLDATGFRQKCREYAQSQIEIQRKDFKRLGVIGDWDNPYQSLDFRFEANE 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                K+ D G + +G     +     +   + E+  
Sbjct: 167 IRALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 203


>gi|314923819|gb|EFS87650.1| valine--tRNA ligase [Propionibacterium acnes HL001PA1]
          Length = 870

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGMLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+    ++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRELIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FAIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPTSRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNYARGEAY 205


>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 929

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 71/471 (15%), Positives = 143/471 (30%), Gaps = 35/471 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDM-----ADVLDISY 91
           +      ++   +  D+ G    +A    G+  +   + +    ++       D    SY
Sbjct: 340 YFASLNYNLDVLSPLDDQGHFTDEAPGFEGIFYEKGNEISIEKMKENNRLLKLDYFSHSY 399

Query: 92  DDFIRTTEKRHHDTC-RILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
               RT +   +    +      K      D+       W+       YN     K    
Sbjct: 400 PHDWRTKKPVIYRATPQWFCSVEKIRERTLDVIDNEVKWWHPSGQTRIYNMIRDRKDWVI 459

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                   P+         F     +         H   +      N         L   
Sbjct: 460 SRQRVWGVPL-------PIFYAENGEPVCTPETIEHVANLFDEFGSNIWFEREAKDLLPE 512

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
             +      G         IM VW D+ +++             +   +PAD+++ G D 
Sbjct: 513 GFTHPASPNG--EFTKEMDIMDVWFDSGSSHHGVLR------TREDLTFPADMYLEGSDQ 564

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               FH+    +  ++   P    +        +G K+SKS+GN + P +VI++ G D L
Sbjct: 565 YRGWFHSSLLTSVAVNNEAPYRSVLSQGFVNDGEGRKMSKSIGNTVSPNDVIKQRGADIL 624

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAF 383
           R ++        D     D L +   A+    I N V R +   L D+D           
Sbjct: 625 RLWVSSVDTYY-DVRISDDILGQV--AENYRRIRNTV-RFLLGNLYDFDAKKDAVAYEDL 680

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT-N 440
              D+ +++  + +++ +R             ++ +   +   + Y D  K     +   
Sbjct: 681 ASIDQYMMNRLNEMVRNVRHAYDTFDFMTVNHEITNFLTLDMSNFYLDYAKDVVYIELPE 740

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
             +   +  V   V + +  LL   +P    +I+  L   +         +
Sbjct: 741 SAQRRNMQTVMYAVAKAVTTLLTPVIPHTTEEIWTYLQEEEAYAQLADFPE 791



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++    +     Y N   HIGHA   I  D++ R   + G    +  G D HG  I +A
Sbjct: 51  KDKTPWVLHDGPPYANGNIHIGHAMNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQA 110

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIR------------TTEKRHHDTCR 107
             N+GV  K       R   +      I    DDF R            T          
Sbjct: 111 LTNSGVDRKSMTVAEFRKLCEEYAWKQINGQRDDFKRLGVAGDWENPYLTLAPEFEAQQI 170

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            L+  + +KG IYKG    ++S   E+   + E+  
Sbjct: 171 RLFGDMYEKGLIYKGAKPVYWSPSSESTLAEAEIEY 206


>gi|50843042|ref|YP_056269.1| valyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81826412|sp|Q6A7F4|SYV_PROAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50840644|gb|AAT83311.1| valyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|315106811|gb|EFT78787.1| valine--tRNA ligase [Propionibacterium acnes HL030PA1]
          Length = 870

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGMLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+    ++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRELIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FAIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPNPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNYARGEAY 205


>gi|314966167|gb|EFT10266.1| valine--tRNA ligase [Propionibacterium acnes HL082PA2]
 gi|315104290|gb|EFT76266.1| valine--tRNA ligase [Propionibacterium acnes HL050PA2]
 gi|327328163|gb|EGE69932.1| valyl-tRNA synthetase [Propionibacterium acnes HL103PA1]
          Length = 870

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGMLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+    ++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRELIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FAIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNYARGEAY 205


>gi|85000765|ref|XP_955101.1| leucyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303247|emb|CAI75625.1| leucyl-tRNA synthetase, putative [Theileria annulata]
          Length = 925

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 7/204 (3%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M + +K YI + I Y + +  H+GH     + DV+AR+ RL G +VL   G D  G    
Sbjct: 165 MDKDKKYYILSMIPYVSGKGLHVGHLLGYTVVDVIARYKRLKGFNVLNPMGYDSFGIPTQ 224

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
             ++   +T +  V+QN  NFR     +  S+D    + T++  ++   + +++++  K 
Sbjct: 225 LYSKKHNLTPEEAVEQNVNNFRQQLKAMGYSFDYSRELVTSDVSYYKWTQWIFQQMYLKN 284

Query: 118 DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLL 177
             Y       Y     +  +++EV  G   +        V    +  +  R++ Y  +L 
Sbjct: 285 LAYVDTDYVNYCSELGSELSNEEVVDGKSVRGGFD----VYKKLKSMWKLRITEYAQRLY 340

Query: 178 SYYESHPEFILPIERRNEVISFVK 201
              ++       I  +   I+  K
Sbjct: 341 DDLKNVDFPDRLIHLQRTWINPQK 364



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 32/209 (15%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SKS GNV  P E+I+  G D+LR  L+ +    KD  +    ++      L   I   
Sbjct: 743 KMSKSRGNVASPEEIIKRFGADSLRLHLLFQGPVDKDRIWSIQSIQGPY--KLLKSINAF 800

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
           V+         +        +    D +++   +  +  +  NM+N  +++        V
Sbjct: 801 VTNF-------FKQNSIESTSNNTIDPTVIPKLNEFINTMTYNMENFKLNK--------V 845

Query: 422 SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF---DILF 478
           SE  ++F   K W+ +K           ++  V+    I+L  F P L+  ++     L 
Sbjct: 846 SEFFKFFTLMKLWDEEK----------KLSPRVVETFLIILSPFAPHLSEHLWYTKHRLS 895

Query: 479 VAD-ENRCFQSLDQRLKPGFMLHKTFDPI 506
             + +N  +  + ++ K    L K    +
Sbjct: 896 SGEPDNELYNEVSKKFKS-ITLEKWPKIV 923


>gi|302348145|ref|YP_003815783.1| Isoleucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328557|gb|ADL18752.1| Isoleucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 1061

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 97/271 (35%), Gaps = 11/271 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +  VW D+   +  + G+  N +       P DL + G D L   F ++     +   + 
Sbjct: 525 VADVWFDSGIAFYASLGFPRNKEAFNRLM-PVDLVLEGHDQLRGWFFSLLRSGVIGFGSA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +  +G ++ KSLGN +   +++++   D LR +L+R     +D  +   
Sbjct: 584 PYRRVLVHGFVLDEQGREMHKSLGNYVAVEDILKKYPRDVLRLYLLRNTT-WEDLRFSWH 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA----FTESDESILSVCSRVLQE 400
            +      D           S+ M L  +D    T  +        D  +LS  +  L E
Sbjct: 643 NI-DVTARDFTIMRNVYAFASMYMSLDGFDPKAVTLDSVRDHLEVEDRWLLSRLNSYLDE 701

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQL 458
            R+ +    +H A   V   +       Y    +    ++++              ++  
Sbjct: 702 YRKRLDKLEVHEAARIVRDFIVEDISRWYLRLIRRRVWEESDTPSKRAAYATLYAALKTW 761

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSL 489
            ++    +P L+  ++       E    +S+
Sbjct: 762 ILMAAPIMPFLSEYLYQNFIRPAEPDMPESV 792



 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 21/160 (13%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + KLY      Y +A   H+G A+  ++ D L R++R+ G DV    G D HG  I   
Sbjct: 40  NKGKLYFLDGPPYASASSIHLGTAWNKVLKDALLRYYRMLGYDVWDKPGYDTHGLPIEIL 99

Query: 62  AQNA------------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKR 101
            +                      T    V+ N +   +    L +  D      T    
Sbjct: 100 VEKMYNIKNKKEIETSVGIERFVNTCLDVVENNIKGMTENFKQLGVFMDWENPYVTYSDD 159

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           + ++   L+K   DKG +Y+      +  R E    D EV
Sbjct: 160 YIESGWYLFKVAHDKGLLYRSQRVLHWCPRCETTLADYEV 199


>gi|261365368|ref|ZP_05978251.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566158|gb|EFC87718.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 930

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 107/277 (38%), Gaps = 19/277 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLK------QREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       G+     K+
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGE-LAISKE 647

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
            LK+   +     I N +S  +   L D+D    T       E D   L +  ++ + + 
Sbjct: 648 ILKRVTES--YRRIRNTLS-FLFANLSDFDPFEHTVPQADMVEIDRYALVLARQLQERLA 704

Query: 403 -ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQL 458
            +       H A+  +++  SE     Y D  K      K +     +       + R L
Sbjct: 705 GDFYPRYAFHFAVKDIVAFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHITRSL 764

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +L+   +     + +DI+   +E+           P
Sbjct: 765 VLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPP 801



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           S  + K  +   +   + LP 
Sbjct: 226 SGIEGKAFAVIWTTTPWTLPA 246


>gi|115613243|ref|XP_795172.2| PREDICTED: similar to Vars protein, partial [Strongylocentrotus
           purpuratus]
 gi|115934144|ref|XP_001180042.1| PREDICTED: similar to Vars protein, partial [Strongylocentrotus
           purpuratus]
          Length = 677

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 124/380 (32%), Gaps = 48/380 (12%)

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           + +     +Y+   N   W      ++        +     S P                
Sbjct: 113 IPEMHKKTWYSWLRNSRDWCISRQLWWGHRIPAYFVTIDDPSVPAGEETDNNYWISALSQ 172

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           +   +  +   K  +  I +  D   ++  W  +     +  G+ +  D   A F+P  L
Sbjct: 173 EEAKRKAAERFKVTENKITLEQDED-VLDTWFSSGIFPFSIFGWPNQTD-DLAAFYPGTL 230

Query: 261 HVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVI- 317
              G DI+ F    +   +  L+  LP  +           G K+SKSLGNVIDP++VI 
Sbjct: 231 LETGHDIIFFWVARMVMMSLTLNDVLPFTEVYLHAMVRDAHGRKMSKSLGNVIDPVDVIK 290

Query: 318 ------------------------------------EEVGVDALRYFLVREIACGKDGFY 341
                                                E G DALR+ L    + G+D   
Sbjct: 291 GITLEELHKILEQGNLDPKEVEKAKKGQKEDYPNGIPECGTDALRFALCAYTSQGRDI-- 348

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDY--DGMIPTPGAFTESDESILSVCSRVLQ 399
           + D L+ +      N + N    +++ +  ++         G+ T  D  +LS  S  ++
Sbjct: 349 NLDVLRVQGYRFFCNKMWNATKFAMNALGDNFVPSPAFQLSGSETPVDMWLLSRLSAAVK 408

Query: 400 EIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQ 457
              +             + +       D Y +  KP  L+  +  +   V  +    +  
Sbjct: 409 VCEQGWPVYDFPAITTAIYAFWLYDLCDVYLEYTKP-LLQTPDAPQLGVVRQILYTCLDA 467

Query: 458 LAILLQAFVPKLANKIFDIL 477
              L+   +P ++ +++  L
Sbjct: 468 GLRLISPIMPFISEELYQRL 487


>gi|307707452|ref|ZP_07643934.1| isoleucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616404|gb|EFN95595.1| isoleucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 930

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 104/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSTND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               G+  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGIKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|157826106|ref|YP_001493826.1| valyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225528|sp|A8GPJ3|SYV_RICAH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157800064|gb|ABV75318.1| valyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 812

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 115/335 (34%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT-FDWGI-KI 220
           E +   +S         Y   P  +   +R  E    + + +  L +        G  K 
Sbjct: 388 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADISQLPVDPLKDLPIGYSKE 447

Query: 221 PDDPQ-YIMYVWIDALTNY----LTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             +P   +M  W  +  +        +           K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDLDVMDTWATSSVSPQLSTHCISDNFAVNKDRHNKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWGNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDG----MIPTPGAFTESD 387
             G D  Y +D    +    L N + N           LKD D              E D
Sbjct: 568 -LGADTAYSED--VMKNGKRLVNKLWNACKFIFIHCNKLKDVDKKASLFDIKEQITNEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN--PDR 443
           + +++    ++      +QN     A+            D Y +  K     + N  P  
Sbjct: 625 QWMINKLVELVNAATNELQNYEYANAMHLTEKFFWVIFCDNYLEISKTRSYDEENKNPQG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSILTLYHVMQILLKLFAPFIPHITEELYQILY 719



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   + T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  ISKEETYVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMIGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                   +  V+     FR + + + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNMGRDEFIKICEEVVESEEEKFRRLFNQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +  +  KG IY+      +   D       ++   A   + N      +  E 
Sbjct: 153 SQMSFLDLVKKGKIYRNDQPILWDPVDGTALAQADIEDKAKTSFMNYIIFKTEQGES 209


>gi|307705381|ref|ZP_07642240.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621044|gb|EFO00122.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 930

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 104/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   N         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|241203267|ref|YP_002974363.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857157|gb|ACS54824.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 963

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPADL++ G D     FH+    + 
Sbjct: 560 WTQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFHSSLLESA 613

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++       D
Sbjct: 614 ATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYA-DD 672

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    I       E ++ +L   + + 
Sbjct: 673 LRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEEI-ALADLPELEQLMLHRLAELD 729

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +REN       +    +I   + E+   YFD +K   L    P   R    L+V  ++
Sbjct: 730 ELVRENYDAFDFKKIARALIDFANVELSAFYFDVRKD-ALYCDAPSSLRRRASLHVIRQI 788

Query: 455 IRQLAILLQAFVPKLANKIF 474
              +   L   +P    + +
Sbjct: 789 FDCMVTWLAPMLPFTTEEAW 808



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           +                      + F     +   +    L I   +D+   T       
Sbjct: 113 EEKYREKGKNKDEVPVNEFRRECREFAAGWIKVQAEEFKRLGIEGDFDNPYTTMNFHAES 172

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  KI+  G +Y+G     +S+ +     + EV              PV
Sbjct: 173 RIAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEVEYQDYESDTIWVKFPV 225


>gi|282854719|ref|ZP_06264054.1| valine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582301|gb|EFB87683.1| valine--tRNA ligase [Propionibacterium acnes J139]
 gi|315090846|gb|EFT62822.1| valine--tRNA ligase [Propionibacterium acnes HL110PA4]
          Length = 870

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGMLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+    ++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRELIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FAIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNYARGEAY 205


>gi|240047649|ref|YP_002961037.1| isoleucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985221|emb|CAT05234.1| Isoleucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 885

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/458 (14%), Positives = 149/458 (32%), Gaps = 34/458 (7%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI- 95
           F      ++      ++ G    +A Q A +  +    Q  +   +   +L +S+     
Sbjct: 333 FWIGKEFNLEMIMHVNDDGTFNEQADQFANLFYEDANKQIGQFLEEKNSLLHLSFIKHSF 392

Query: 96  ----RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
               RT +   +      +  +                      +  + + K  +G+   
Sbjct: 393 PHDWRTHKPVIYRGTPQWFISVEKIKQGILKEIQSIDFPEH---WLKNRLEKMIEGRKDW 449

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  W      F+               H  +++     +    +    L       
Sbjct: 450 IISRQRSWGVPLIIFYDEKGKPVLDKLALFDHVIYLIEKHGSDIWYQWSTDELLPEQFRN 509

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
           + +            I+ VW D+ +++L              +  P DL++ G D     
Sbjct: 510 RNWT-------KELDILDVWYDSGSSFLAADI--------DGEKSPFDLYLEGSDQYRGW 554

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    +++     P  K +     +  KG K+SKS GN I P+E+I++ G D LR ++
Sbjct: 555 FNSSLINSYIYQQKSPYKKLLSHGFVVDAKGNKMSKSKGNGISPLELIDKYGTDVLRLWV 614

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
                   D  Y K+  ++  N ++   I N +   ++ ++   D      G        
Sbjct: 615 ANSEYF-NDVVYSKEIFEQ--NVEIYRKIRNTIRFLITNLIDYKDDSYQREG----IHAY 667

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELK-KTNPDRASTV 447
           I +   +   EI  N  N    + +  + + + E+ + Y    K      K +      +
Sbjct: 668 IANKIVQFKNEIITNYDNYHFVKVVKLINNFIIEISNFYLSIVKDSLYADKQDHINRRAI 727

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
                E++  L I +   +P  A +++  +   D+   
Sbjct: 728 QKNLYELLNVLVISIAPIMPTTAEEVYSFINKEDKKVS 765



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 11/168 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ R+  + G    F  G D HG  I   
Sbjct: 48  KNKQSFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMQGFYAPFVPGWDTHGLPIENK 107

Query: 62  AQNAGVT---------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
             +                + +   ++       LD+   +    +T +  +      L+
Sbjct: 108 IISQIKDQDVVQIRTLANNYANSQVQSQMSQFKKLDLFTDFSKIYQTNKPSYEAKQLQLF 167

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           K++  +  IY+G    ++S   ++   + E+               V+
Sbjct: 168 KEMVSQNLIYRGLKPVYWSTSSQSALAEAEIEYFDHRSPSIYVAFEVE 215


>gi|219670052|ref|YP_002460487.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782390|sp|B8FT35|SYI_DESHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219540312|gb|ACL22051.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 922

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 17/270 (6%)

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            T   G K       IM VW D+ T++ +           K   WPADL++ G D     
Sbjct: 508 FTCACGGKSFRKETDIMDVWFDSGTSHTSVLMER------KELAWPADLYMEGSDQHRGW 561

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    +       P    +     +  KG K+SKSLGN +DP++V +E+G D LR ++
Sbjct: 562 FNSSLSTSVAAYGKAPYKAVLTHGFLVDEKGRKMSKSLGNGVDPLQVTKEMGADILRLWV 621

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESD 387
                   D       +K+   ++    I N + R +   L D+D            E D
Sbjct: 622 CAADY-KNDVAVSPRIMKQ--MSEAYRKIRNTL-RFLLSNLNDFDPAKDRVAYKDLPEID 677

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPW-ELKKTNPDRA 444
              L    +V Q + +  +    H     V +  + E+   Y D  K    ++  N    
Sbjct: 678 RWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVKDRLYVEGKNSTLR 737

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                V  +V+  L  L+   +   A++I+
Sbjct: 738 RASQTVLYDVLNALVRLMAPVLTYTADEIW 767



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 15/170 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+GHA   +I D++ ++  + G D  +  G D HG  I +  
Sbjct: 46  GRPKFVLHDGPPYANGDIHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQV 105

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                               K +  +     ++    L +   + +   T EK +     
Sbjct: 106 IKKLGVNRHAVSVVEFRRMCKEYAKKYISIQKEQFKRLGVRGDWQNPYLTLEKEYEAAQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K++ K  IYKG    ++    E    + E+       +      PV
Sbjct: 166 GVFGKMARKKYIYKGLKPVYWCPSCETALAEAEIEYAEKTSHAIYVKFPV 215


>gi|82703767|ref|YP_413333.1| isoleucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411832|gb|ABB75941.1| Isoleucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 943

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 102/284 (35%), Gaps = 17/284 (5%)

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWP 276
           K        + VW D+ T + T               +PADL++ G D     F +    
Sbjct: 540 KDYKKLTDTLDVWFDSGTTHDTVLK------PDPQLKYPADLYLEGSDQHRGWFQSSLLT 593

Query: 277 AFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
              +    P    +     +   G K+SKS GNVI P +V++  G D LR ++      G
Sbjct: 594 GCAIDGRAPYDALLTHGFVVDGHGHKMSKSRGNVIAPQKVMDTSGADILRLWVGSTDYSG 653

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVC 394
           +      + LK+ V +     I N + R +   L D+D          + E D  IL+  
Sbjct: 654 E-LSISDEILKRVVES--YRRIRNTL-RFLLANLADFDSSTDAVPIEQWLEIDRYILAFT 709

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVT 451
            R+  ++ E+  N   H  + ++ +  SE     Y D  K        N     +     
Sbjct: 710 RRLQDKVVEDYCNFDFHLIVHRLHNFCSEDLGGFYLDVLKDRLYTASANGLPRRSAQSAL 769

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
             +   L  L    +   + +++  L    EN  F     RL P
Sbjct: 770 HHIAHSLVRLFAPILSFTSEEVWQYLHGDSENSIFLHTWHRLPP 813



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGRPKFVLHDGPPYANGDIHIGHAVNKILKDIIIKSKTLAGFDAPYVPGWDCHGLPIEHQ 105

Query: 62  AQNA----------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + F  +     +     L +   +D+   T   R        
Sbjct: 106 IEKKYGKNLPGDKVRELCRAFAKEQVARQKADFIRLGVLGDWDNPYLTMNYRTEAGIIRA 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             KI + G +Y+G     + +   +   + EV  
Sbjct: 166 LGKIHENGYLYQGQKPVNWCIDCGSALAEAEVEY 199


>gi|89895628|ref|YP_519115.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|123091718|sp|Q24TH1|SYI_DESHY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89335076|dbj|BAE84671.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 922

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 17/270 (6%)

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            T   G K       IM VW D+ T++ +           K   WPADL++ G D     
Sbjct: 508 FTCACGGKSFRKETDIMDVWFDSGTSHTSVLMER------KELAWPADLYMEGSDQHRGW 561

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    +       P    +     +  KG K+SKSLGN +DP++V +E+G D LR ++
Sbjct: 562 FNSSLSTSVAAYGKAPYKAVLTHGFLVDEKGRKMSKSLGNGVDPLQVTKEMGADILRLWV 621

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESD 387
                   D       +K+   ++    I N + R +   L D+D            E D
Sbjct: 622 CAADY-KNDVAVSPRIMKQ--MSEAYRKIRNTL-RFLLSNLNDFDPAKDRVAYKDLPEID 677

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPW-ELKKTNPDRA 444
              L    +V Q + +  +    H     V +  + E+   Y D  K    ++  N    
Sbjct: 678 RWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVKDRLYVEGKNSTLR 737

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIF 474
                V  +V+  L  L+   +   A++I+
Sbjct: 738 RASQTVLYDVLNALVRLMAPVLTYTADEIW 767



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 15/170 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K  +     Y N   H+GHA   +I D++ ++  + G D  +  G D HG  I +  
Sbjct: 46  GRPKFVLHDGPPYANGDIHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQV 105

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
                               K +  +     ++    L +   + +   T EK +     
Sbjct: 106 IKKLGVNRHAVSVVEFRRMCKEYAKKYISIQKEQFKRLGVRGDWKNPYLTLEKEYEAAQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K++ K  IYKG    ++    E    + E+       +      PV
Sbjct: 166 GVFGKMARKKYIYKGLKPVYWCPSCETALAEAEIEYAEKTSHAIYVKFPV 215


>gi|239948481|ref|ZP_04700234.1| valyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922757|gb|EER22781.1| valyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 495

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 19/268 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W  +  +   +T  + +          K +P DL     +I+R  A Y    A L 
Sbjct: 138 VMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTILKAHLH 197

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 198 QNTLPWENIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK-LGADTA 256

Query: 341 YDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAFTESDESILSVC 394
           Y +D    +    L N + N           +    K    +        E D+ I++  
Sbjct: 257 YSED--VMKNGKRLVNKLWNAAKFVSIHFDKLKGKDKKAKLLDVKEKITNEFDQWIINKL 314

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--PDRASTVLYV 450
             +++     +QN     A+            D Y +  K     + N  P    + +  
Sbjct: 315 VELVKLATNELQNYEYANAMHLTEKFFWAVFCDNYLEISKTRSYDEENKNPQEQYSSILT 374

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
              V++ L  L   F+P +  +++ IL+
Sbjct: 375 LYHVMQTLLKLFAPFMPHITEELYQILY 402


>gi|120437357|ref|YP_863043.1| leucyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|166231610|sp|A0M5T1|SYL_GRAFK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|117579507|emb|CAL67976.1| leucyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 962

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 3/140 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y+     YP+    H+GH    I +D+ ARF R  G +VL   G D  G    +
Sbjct: 28  SEKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARFKRHKGFNVLHPQGYDSFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V  + N   +R+  D +  S+D    +RT+E  ++   + ++ ++ +   
Sbjct: 88  YAIQTGQHPAVTTENNIARYREQLDKIGFSFDWSREVRTSEPDYYKWTQWIFIQLFESWY 147

Query: 119 IYKGCYSGWYSLRDEAYYND 138
             +   S   +  +E + ++
Sbjct: 148 DQEAEKSRAITELEEIFTSE 167



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 74/181 (40%), Gaps = 33/181 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P E+ ++ G D LR + +      +   ++  G+    N      +  
Sbjct: 736 EKMSKSKYNVVNPDEICQDYGADTLRMYEMFLGPLEQAKPWNTAGITGVHN--FLKKLWK 793

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
           L        + D            ++    L    + ++++ E+++    + +++  +  
Sbjct: 794 LYYDGEEFFVSD-----------EKASADSLKTFHKTIKKVTEDIEEFSFNTSVSTFMIC 842

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E      AQK                  + E++  LA+L+  + P +A ++++ L  +
Sbjct: 843 VNE----LTAQK----------------CNSREILEPLAVLIAPYAPHIAEELWEKLGNS 882

Query: 481 D 481
           +
Sbjct: 883 E 883


>gi|304388367|ref|ZP_07370478.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337633|gb|EFM03791.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 104/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVI 455
            +  +       H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPSINEKAEAELVKKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|288801800|ref|ZP_06407242.1| leucine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288335842|gb|EFC74275.1| leucine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 968

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  D N   +R+  D +  S+  D  +RT + R++   +  ++++ +   
Sbjct: 88  YAIQTGQHPQLTTDTNIARYREQLDKIGFSFDWDREVRTCDPRYYHWTQWAFERMFESYY 147

Query: 119 IYK 121
            Y 
Sbjct: 148 DYT 150



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 82/194 (42%), Gaps = 40/194 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++E+ G D LR + +          +D +G+         +G   
Sbjct: 744 EKMSKSMFNVVNPDVIVEQYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCFR 794

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  ++ +   P+  +        L    ++++++  +++    + A++  +  
Sbjct: 795 FLKKFWKLYQQELNDDAPSKDS--------LKSVHKLIKKVTGDIEQFSYNTAVSAFMIC 846

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E+                  + +       E+++++ I++  F P +A ++++ L   
Sbjct: 847 VNEL---------------GQQKCAN-----RELLKKMVIVIAPFAPHMAEELWEQLGGE 886

Query: 481 DEN---RCFQSLDQ 491
            ++     +   D+
Sbjct: 887 TKSVFDAEWPEWDE 900


>gi|218661213|ref|ZP_03517143.1| isoleucyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 534

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/327 (19%), Positives = 117/327 (35%), Gaps = 23/327 (7%)

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
              +    R  A+   +  + + H   +        ++    +   D   +    +  + 
Sbjct: 64  QRPDWVLSRQRAWGVPICVFVDEHGAVLQDEAVNARILEAFDAEGADAWFAEGAKERFLG 123

Query: 220 IPDDP------QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFH 271
              DP        I+ VW D+ + +  T              WPADL++ G D     FH
Sbjct: 124 NEHDPAKWSQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFH 177

Query: 272 AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           +    +       P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++ 
Sbjct: 178 SSLLESAATRGRAPYDAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMT 237

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                 D    K  ++   N D    + N +   +  +  D    I       E ++ +L
Sbjct: 238 SDYA-DDLRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDRGEEI-ALADLPELEQLML 293

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTV 447
              + + Q +REN       +    +I   + E+   YFD +K   L    P   R    
Sbjct: 294 HRLAELDQLVRENYDAFDFKKIARALIDFANVELSAFYFDVRKD-ALYCDAPSSLRRRAS 352

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF 474
           L+V  ++   +   L   +P    + +
Sbjct: 353 LHVIRQIFDCMVTWLAPMLPFTTEEAW 379


>gi|167043876|gb|ABZ08565.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG3E18]
          Length = 951

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/388 (15%), Positives = 141/388 (36%), Gaps = 62/388 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   V  +    +F        K  +        ILP   R E  ++V   L + +
Sbjct: 429 RCRCGAECVVKILTNQWFLNYRDKAWKEKATKCLDGMSILPQHIRPE-FNYVIGWLHERA 487

Query: 209 LSRKTFDWGIKIPDDPQYIM-----------------------------------YVWID 233
            +R+    G K+P + ++I+                                   YV++ 
Sbjct: 488 CARQ-HGLGTKLPWNKEWIVESLSDSVIYMAYYIIAKFVNAGVISAEKLSKEFFDYVFLG 546

Query: 234 ALTN--YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--LSANLPLPKK 289
             ++         ++      + F+P D    G+D++  H  ++      +      P++
Sbjct: 547 IGSSDVSGVPKDIVEEIRAEFSYFYPVDSRHSGRDLVPNHLTFFVLNHVAIFPENNWPQQ 606

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +  +G +L  G+K+SKS+GN+I   E + + G D +R  ++      +D  ++ + +K  
Sbjct: 607 IVVNGSVLMDGKKMSKSMGNIIPLREAVRKYGADPIRLTILNSAELLQDADFNVEAIKGI 666

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N      + ++         + +             D+ I  +   ++    ++M    
Sbjct: 667 KN-----KLASMYEDCTKTKAEKFP-------ELEPEDKWIHGILQNLVLNAGKSMDEIR 714

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +  AL  +  L       FD++  W LK+T   + + +  +  +++    ++L  F P +
Sbjct: 715 LREALHHI--LFD-----FDSELQWYLKRTKSKQRTNISGILHKILSYRVLMLSPFAPHI 767

Query: 470 ANKIFDILFVAD--ENRCFQSLDQRLKP 495
           A ++++ L  +       + S+   + P
Sbjct: 768 AEEMWEKLGHSGLVSQSSWPSVSDVIDP 795



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 26/170 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK +I+ A  YPN+  HIGH     I DV +R+ R+ G +VLF  G    G  I   +
Sbjct: 28  NKEKKFITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGFNVLFPMGFHYTGTPILGMS 87

Query: 63  Q------------------------NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIR 96
           +                           V      +   +  ++    +  S D      
Sbjct: 88  KRVEAGDTEIIDGLKNIYNVPDEAIKTFVEPIKIANYFHQEIKEGMIEMGYSIDWRREFT 147

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           T +  +          + +K  I +G +   +  +D+   +  +     +
Sbjct: 148 TIDPAYQKFIEWQINTLKEKNLIIQGSHPVGWCPKDQNPVSQHDTMGDVE 197


>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 916

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++ +               +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRSVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I          P     + D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDYNPESDYIPENELLDVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LTDMTKLLSPILVHTAEEVWSH 770



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNQSYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +D+   T    +     
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|313669053|ref|YP_004049337.1| isoleucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006515|emb|CBN87979.1| putative isoleucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/306 (20%), Positives = 107/306 (34%), Gaps = 30/306 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +  D     M VW D+ + + +           +   WPADL++ G D     F +   
Sbjct: 524 CEHYDKLSDTMDVWFDSGSTHYSVLK------QREELEWPADLYLEGSDQHRGWFQSSML 577

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +      
Sbjct: 578 TGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS--- 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDES 389
                 Y  +    +            +  ++S +  +     P   A       E D  
Sbjct: 635 ----TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVPQAEMVEIDRY 690

Query: 390 ILSVCSRVLQEIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-S 445
            L +  R+ + +  +       H A+ +++S  SE     Y D  K          RA  
Sbjct: 691 ALVLARRLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTQADSRARR 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLH 500
           +       + R L +L+   +     + +DI+   +E+               K    L 
Sbjct: 751 SAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKAEAELV 810

Query: 501 KTFDPI 506
           K +  I
Sbjct: 811 KKWTAI 816



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKVRFRELCREYAAEQVARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|300784293|ref|YP_003764584.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299793807|gb|ADJ44182.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 837

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 13/256 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLL 280
           DP  +M  W  +         +  + D   ++ +P DL     +I+R         A L 
Sbjct: 498 DPD-VMDTWATSSLTPQIVGRWSIDDD-LFSRVFPMDLRPQAHEIIRTWLFSTAVRAELE 555

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP  +   +   +    +K+SKS GNV  P++++E  G DA+RY+            
Sbjct: 556 HGVLPWREASIAGWVLDPDRKKMSKSKGNVTTPVDLLERFGSDAVRYWAASARPGVDTAV 615

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
              D  + +V   LA  + N     + +        +P   A    D ++L+  + V  +
Sbjct: 616 ---DEGQMKVGRRLATKLLNASRFVLGL-----GVPMPGAAATEPLDRALLASLAVVTGQ 667

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLA 459
               ++     RAL    +      D Y +  K        PD A +     V  +  L 
Sbjct: 668 ATAALEASDYARALQVTETFFWTFCDDYVELVKGRAYGDRGPDAAQSARAALVTALSALL 727

Query: 460 ILLQAFVPKLANKIFD 475
            L   F+P    +++ 
Sbjct: 728 RLFAPFLPFATEEVWS 743



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 9/145 (6%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           K R+++Y I T     +   HIGH +     DVLARF R+ GL+V +  G D++G    +
Sbjct: 39  KTRDEVYSIDTPPPTVSGSLHIGHVFSFTHTDVLARFKRMRGLEVFYPMGWDDNGLPTER 98

Query: 61  AAQNA------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKIS 114
             QN                +     +   DV+ IS  +F+   E       +   +   
Sbjct: 99  RVQNHFGVRCEPSLPYDPDFRPPE--KPGKDVVAISRRNFVELCESLTETDEQAFERLWR 156

Query: 115 DKGDIYKGCYSGWYSLRDEAYYNDD 139
             G       +      D    +  
Sbjct: 157 QLGLSVDWTMTYQTIGHDSRLISQR 181


>gi|302344802|ref|YP_003813155.1| leucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149393|gb|ADK95655.1| leucine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 968

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  D N   +R+  D +  S+  D  +RT + R++   +  ++++ +   
Sbjct: 88  YAIQTGQHPQLTTDTNIARYREQLDKIGFSFDWDREVRTCDPRYYHWTQWAFERMFESYY 147

Query: 119 IYK 121
            Y 
Sbjct: 148 DYT 150



 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 83/194 (42%), Gaps = 40/194 (20%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ NV++P  ++E+ G D LR + +          +D +G+         +G   
Sbjct: 744 EKMSKSMFNVVNPDVIVEQYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCFR 794

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + +   +  ++ +   P+  +        L    ++++++  +++    + A++  +  
Sbjct: 795 FLKKFWKLYQQELNDDEPSKDS--------LKSVHKLIKKVTGDIEQFSYNTAVSAFMIC 846

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E+                  + +       E+++++ I++  F P +A ++++ L   
Sbjct: 847 VNEL---------------GQQKCAN-----RELLKKMVIVIAPFAPHMAEELWEQLGGE 886

Query: 481 DEN---RCFQSLDQ 491
            ++     + + D+
Sbjct: 887 TKSVFDAEWPAWDE 900


>gi|157828905|ref|YP_001495147.1| valyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933628|ref|YP_001650417.1| valyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166225531|sp|A8GTB4|SYV_RICRS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083632|sp|B0BUV1|SYV_RICRO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157801386|gb|ABV76639.1| valyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908715|gb|ABY73011.1| valyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 812

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 121/339 (35%), Gaps = 30/339 (8%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E +   +S         Y   P  +   +R  E    + + +  L +           K 
Sbjct: 388 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADITQLPIDPLKDLPMGYSKE 447

Query: 221 PDDPQY-IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY- 274
             +P Y +M  W  +  +   +T  + +          K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMISGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT--------- 384
             G D  Y +D +K          + N +  +   +   +D +       +         
Sbjct: 568 -LGADTAYSEDVMKNGKR------LVNKLWSAAKFVFIHFDKLKGEDKKASLLDIKEKIT 620

Query: 385 -ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT-- 439
            E D+ +++    +++     +QN     A+            D Y +  K     +   
Sbjct: 621 NEFDKWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVFCDNYLEISKTRSYDEEHK 680

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           NP    + +     V++ L  L   F+P +  +++ IL+
Sbjct: 681 NPQGQYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 54/149 (36%), Gaps = 17/149 (11%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  VAKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNAGVTTKVFVDQNSR--------------NFRDMADVLDISYDD--FIRTTEKRHHD 104
             +      K +  + S                FR + + + +S D     +T       
Sbjct: 93  LVEKQKQI-KAYNMERSEFIKICEEVVESEEEKFRSLFNQIALSVDWSLEYQTISPLSRK 151

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDE 133
             ++ +  +  K +IY+      +   D 
Sbjct: 152 ISQMSFLDLVQKEEIYRTNQPILWDPVDG 180


>gi|327312865|ref|YP_004328302.1| leucine--tRNA ligase [Prevotella denticola F0289]
 gi|326945158|gb|AEA21043.1| leucine--tRNA ligase [Prevotella denticola F0289]
          Length = 973

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V   +N   +R+  D +  S+  D  +RT +  ++   +  ++++ +   
Sbjct: 88  YAIQTGQHPEVTTKKNIARYREQLDKIGFSFDWDREVRTCDPHYYHWTQWAFERMFNSYY 147

Query: 119 IYK 121
            Y 
Sbjct: 148 DYT 150



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 96/220 (43%), Gaps = 43/220 (19%)

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +   +A+ P P  V+  G+ +    K+SKS+ NV++P +++E+ G D LR + +     
Sbjct: 727 RSAESTADRPTPAAVYKCGWAIE---KMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPV 783

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
                +D +G+         +G    + +   +  ++ D   P+  +        L    
Sbjct: 784 EASKPWDTNGI---------DGCFRFLKKFWKLYQQELDDGEPSKES--------LKSVH 826

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R+++++  +++    + A++  +  V+E+                  + ++      E++
Sbjct: 827 RLIKKVTGDIEQFSYNTAISAFMICVNEL---------------GQQKCAS-----RELL 866

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQR 492
           +++ +L+  F P +A ++++ L    ++ C   + + D+ 
Sbjct: 867 KKMIVLIAPFAPHMAEELWEQLGGETKSVCDAAWPAWDEA 906


>gi|325859836|ref|ZP_08172966.1| leucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482762|gb|EGC85765.1| leucine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 973

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ENKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLKGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V   +N   +R+  D +  S+  D  +RT +  ++   +  ++++ +   
Sbjct: 88  YAIQTGQHPEVTTKKNIARYREQLDKIGFSFDWDREVRTCDPHYYHWTQWAFERMFNSYY 147

Query: 119 IYK 121
            Y 
Sbjct: 148 DYT 150



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 96/220 (43%), Gaps = 43/220 (19%)

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +   +A+ P P  V+  G+ +    K+SKS+ NV++P +++E+ G D LR + +     
Sbjct: 727 RSAESTADRPTPAAVYKCGWAIE---KMSKSMFNVVNPDDIVEQYGADTLRLYEMFLGPV 783

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
                +D +G+         +G    + +   +  ++ D   P+  +        L    
Sbjct: 784 EASKPWDTNGI---------DGCFRFLKKFWKLYQQELDDGEPSKES--------LKSVH 826

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           R+++++  +++    + A++  +  V+E+                  + ++      E++
Sbjct: 827 RLIKKVTGDIEQFSYNTAISAFMICVNEL---------------GQQKCAS-----RELL 866

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRC---FQSLDQR 492
           +++ +L+  F P +A ++++ L    ++ C   + + D+ 
Sbjct: 867 KKMIVLIAPFAPHMAEELWEQLGGETKSVCDAAWPAWDEA 906


>gi|254673172|emb|CBA08035.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135619|gb|EGC58236.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 109/306 (35%), Gaps = 30/306 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +  D     M VW D+ + + +           +   WPADL++ G D     F +   
Sbjct: 524 CEHYDKLSDTMDVWFDSGSTHYSVLK------QREELDWPADLYLEGSDQHRGWFQSSML 577

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +      
Sbjct: 578 TGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS--- 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDES 389
                 Y  +    +            +  ++S +  +     P   A       E D  
Sbjct: 635 ----TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRY 690

Query: 390 ILSVCSRVLQEIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
            L +  R+ + +  +       H A+ +++S  SE     Y D  K      K +     
Sbjct: 691 ALVLARRLQERLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARR 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLH 500
           +       + R L +L+   +     + +DI+   +E+               K    L 
Sbjct: 751 SAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELV 810

Query: 501 KTFDPI 506
           K +  I
Sbjct: 811 KKWTAI 816



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|329963697|ref|ZP_08301143.1| leucine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328527707|gb|EGF54699.1| leucine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 945

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 5/192 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ETKQKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYY 147

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
                 +       E++       +G +       H   +    +    +     +  ++
Sbjct: 148 CNDTQQARPIQELVESF--PKYGNEGLNAACSEELHFTAEEWNAKNEKEQQEILMNYRIA 205

Query: 179 YYESHPEFILPI 190
           Y         P 
Sbjct: 206 YLGETMVNWCPQ 217



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 91/222 (40%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDIEAFKAWRPEYATAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+        
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLFYDRNGRY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+            
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNELSG---------- 830

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +     E++ QL + L  F P +  ++++ L 
Sbjct: 831 ----------LKCYKKEILNQLVVTLAPFAPHVCEELWETLG 862


>gi|315095057|gb|EFT67033.1| valine--tRNA ligase [Propionibacterium acnes HL060PA1]
          Length = 870

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGMLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+    ++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRELIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDA 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FAIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNYARGEAY 205


>gi|312871879|ref|ZP_07731963.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874401|ref|ZP_07734431.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090013|gb|EFQ48427.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092601|gb|EFQ50961.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 928

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 108/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  +   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++     ++ +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|309809437|ref|ZP_07703295.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170109|gb|EFO72144.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 928

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 108/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  +   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++     ++ +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTNMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|260431128|ref|ZP_05785099.1| isoleucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414956|gb|EEX08215.1| isoleucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 972

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 102/290 (35%), Gaps = 14/290 (4%)

Query: 192 RRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI---MYVWIDALTNYLTTTGYLDNP 248
           R         + +      ++    GI  PDD   +   + VW D+ + +       ++ 
Sbjct: 541 RIKAAFEEHGADVWYTDGFKQQVLDGIVNPDDYDQVFDVLDVWFDSGSTHAFVLRDREDG 600

Query: 249 DGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKS 306
                    AD+++ G D     FH+    A       P    V     +  KG K+SKS
Sbjct: 601 APDGI----ADVYMEGTDQHRGWFHSSMLQACGTIGRAPYRNVVTHGFTLDEKGNKMSKS 656

Query: 307 LGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           LGN I P EVI + G D LR ++ +      D     + LK    AD    + N +   +
Sbjct: 657 LGNTIVPEEVIRQYGADILRLWVAQTDY-TADQRIGPEILKGV--ADSYRRLRNTMRFML 713

Query: 367 SMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEV 424
             +    +     P      +  +LS  + + +++R+           + V +   V   
Sbjct: 714 GSLADFTEADRIDPAEMPRLERWVLSRLAELDEQVRKGYAAFDFQGVFSAVFNFATVDLS 773

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIF 474
             YFD +K       +  R      V   +  +L   L   +P    +++
Sbjct: 774 AFYFDVRKDALYCDGDTPRRRAARTVLDILYHRLTTWLAPILPFTMEEVW 823



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 63/184 (34%), Gaps = 13/184 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +     Y N   HIGHA    I D++ R H++ G D  +  G D HG  I    
Sbjct: 53  GRKPFILHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKI 112

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
           +           Q  +  ++  +V  I +    R   +   D  R  +K++   G+    
Sbjct: 113 EE----------QYRKKGKNKDEVPVIDFRQECRKFAEGWIDIQREEFKRLGITGNWADP 162

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
             +       EA   D+ +    +G  Y     PV W   E      +  +      +  
Sbjct: 163 YVT--MDYHAEAVIADEFMKFLMNGTLYQ-GSKPVMWSPIEKTALAEAEVEYHDKESFTI 219

Query: 183 HPEF 186
             +F
Sbjct: 220 WVKF 223


>gi|325688227|gb|EGD30246.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 930

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PAD+++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNSVVVNRPELTYPADIYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDIVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        ++    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|150395637|ref|YP_001326104.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027152|gb|ABR59269.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 969

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPAD+++ G D     FH+    + 
Sbjct: 566 WHQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADVYLEGSDQHRGWFHSSLLESC 619

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GN + P EV+++ G D LR +++      +D
Sbjct: 620 ATRGRAPYNAVITHGFTMDEKGEKMSKSKGNTVTPQEVMKDAGADILRLWVMTTDY-WED 678

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N V   +  +  D    +       E +  +L   + + 
Sbjct: 679 QRLGKTIIQ--TNIDAYRKLRNTVRWMLGTLAHDKG-EVVALSEMPELERLMLHRLAELD 735

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +RE        R    +I   + E+   YFD +K   L    P   R    L V   V
Sbjct: 736 RLVREGYDAFDFKRIARSLIDFSNVELSAFYFDIRKD-ALYCDAPSSLRRRASLQVIRTV 794

Query: 455 IRQLAILLQAFVPKLANKIF 474
              L       +P  A + +
Sbjct: 795 FDCLVTWFAPMLPFTAEEAW 814



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 54/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTC 106
           +                      + F         +    L I  D     T    H   
Sbjct: 113 EEKYREKGKNKDEVPVNEFRKECREFASGWIGVQTEEFKRLGIEGDFENPYTTMNFHAEA 172

Query: 107 RILWKKIS--DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
           RI  + +     G +Y+G     +S+ +     + EV              PV
Sbjct: 173 RIAGELMKIARSGQLYRGSKPVMWSVVERTALAEAEVEYADVESDMIWVKFPV 225


>gi|329943023|ref|ZP_08291797.1| valyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848179|emb|CBY17180.1| valyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506993|gb|ADZ18631.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814570|gb|EGF84560.1| valyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914857|gb|AEB55690.1| valyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 940

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 83/392 (21%), Positives = 128/392 (32%), Gaps = 80/392 (20%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           ++    + +F  + +++D L  +  S    I P E     +S+V   L+D  +SR+   W
Sbjct: 355 IEPYLSKQWFVSVDSFRDSLREFISSDAIKIFPPEFTKNYLSWVN-NLRDWCISRQ-LWW 412

Query: 217 GIKIP-------------------------------DDPQYIMYVWIDALTNYLTTTGYL 245
           G +IP                                DP  ++  W  +    LT  G+ 
Sbjct: 413 GHRIPVWYHKSDANRMLCYDGEGIPEEVAKDPESWDQDPD-VLDTWFSSGLWPLTCLGWP 471

Query: 246 DNPDGSKAKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVFSHGFI------- 296
           DN  G   KF+P  + + G DIL F           +    P    VF HG I       
Sbjct: 472 DNESGDLEKFYPTAVLITGHDILFFWVTRMVLLCSAMVGEKPFSD-VFLHGLIFGKSYKR 530

Query: 297 ----------------------------LHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
                                       + K EK+SKS GNVIDP+E+I + G DA+R  
Sbjct: 531 YNDLGEWTYITGEEKYAYDMGKALPKDVIAKWEKLSKSKGNVIDPLEMIAKYGADAVRMA 590

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP---TPGAFTE 385
           L      G+    D    ++  N   AN I N        I       +           
Sbjct: 591 LCSCANRGEQIDLDYRLFEEYKN--FANKIWNGARFIFGHISNLTSEDLARGIDTTLLGL 648

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDR 443
            D  IL   +R+L+E+    QN    +                Y +  KP    K     
Sbjct: 649 EDYYILDGFNRLLKELHSAYQNYAFDKMTTMAYEFFRNNFCSTYIEIIKPTLYGKQGSKE 708

Query: 444 ASTVLYVTVEVIR-QLAILLQAFVPKLANKIF 474
                   + V+   +  +L    P +   +F
Sbjct: 709 DRLTKQKLLAVLLVNILGVLHPIAPFVTETLF 740



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 63/182 (34%), Gaps = 24/182 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++    I           H+GHA    + DVL R+ R+ G +V +  GTD  G      
Sbjct: 35  SDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTV 94

Query: 62  AQNAGVT-------------TKVFVDQNSR--------NFRDMADVLDISYDDFIRTTEK 100
            +    +                 V Q             R +    D S   F  T E 
Sbjct: 95  VERHLYSSLGKRRVDFSREEFLEHVWQWKEKSEGVILSQLRQLGCSCDWSRLRF--TMEP 152

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQW 159
             +   +  +K + DKG IY+G Y   +    +    DDEV Y+  DG  Y  ++  V  
Sbjct: 153 LANRAVKKAFKILFDKGHIYRGNYLVNWDPVLQTALADDEVEYEEKDGWLYYIRYRVVDS 212

Query: 160 ME 161
            E
Sbjct: 213 SE 214


>gi|309378324|emb|CBX23070.1| isoleucyl-tRNA synthetase [Neisseria lactamica Y92-1009]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/296 (20%), Positives = 105/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVLK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVPQAEMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVI 455
            +  +       H A+ +++S  SE     Y D  K          RA  +       + 
Sbjct: 701 RVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTQADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKAEAELVKKWTAI 816



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDYPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|58616795|ref|YP_195994.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311281|sp|Q5FF72|SYV_EHRRG RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58416407|emb|CAI27520.1| Valyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 812

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 131/377 (34%), Gaps = 19/377 (5%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE-EGYFFRL 169
           + + +     +        L ++ +    EV      Q       P    ++ E +   L
Sbjct: 344 EILHNVKCAERSGMPIEILLSNQWFIKVVEVKHELLEQVRKINWYPQSMRKQIEMWIDGL 403

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-YIM 228
           +         Y   P  +   +R NE I         +  +        K   +    +M
Sbjct: 404 NWDWCISRQRYFGIPFPVWYSKRDNEEIIIPDVNELPIDPTETLPQGYSKEEVEADVDVM 463

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPL 286
             W  +  +    + +            PA L     +I+R  A Y    A+    ++P 
Sbjct: 464 DTWATSSLSPQFNSIHTGINSIPLV---PASLRAQSHEIIRSWAFYTILQAYYHHNSIPW 520

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + S   +     K+SKS GN + P ++++E G D +RY+       G D  +  + L
Sbjct: 521 ENIMVSGWCLAADKSKMSKSKGNALIPNQLLQEYGADVIRYW-AANSRLGSDTVFSDEVL 579

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENM 405
           +  +   L   + N        + +     IP     TE  D+ +L+   +V+ +  E+ 
Sbjct: 580 Q--LGKRLVTKLWNASKFVSMFVSQ---CQIPDLNYVTETMDKWVLTKLYKVIVKATESF 634

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAIL 461
                  AL  + S       D Y +  K     +  T+ +  S V  ++  V+  L  +
Sbjct: 635 DVFEYCVALDYIESFFWKDFCDNYLELVKKRAYGESVTSKENLSAVNTLSF-VLTTLLKM 693

Query: 462 LQAFVPKLANKIFDILF 478
           L  F+P +  +I+  L+
Sbjct: 694 LAPFMPYITEEIYSTLY 710



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 15/152 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           ++  I T     + Q HIGH +     D +AR+ R+ G DVL+  G D++G         
Sbjct: 38  KQFIIDTPPPTISGQLHIGHVFSYCHTDFIARYQRMLGKDVLYPIGFDDNGLPTERLVEK 97

Query: 60  -KAAQNAGVTTKVFVDQNSR-------NFRDMADVLDISYDD--FIRTTEKRHHDTCRIL 109
            K  + A +  K F    +         F+ +   L ISYD      T  +      ++ 
Sbjct: 98  IKKVRAADIDRKEFKALCNEVSAKFRMEFKILFQSLGISYDWDLEYHTISEEIQKLSQMS 157

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  + + G IY+     ++   D       EV
Sbjct: 158 FIALYNMGKIYRKLQPIFWDCADRTAIARVEV 189


>gi|300724587|ref|YP_003713912.1| isoleucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631129|emb|CBJ91818.1| isoleucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 937

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 122/391 (31%), Gaps = 32/391 (8%)

Query: 107 RILWKKISDKGDI--YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
           +  +           ++     + S+                          ++ M E  
Sbjct: 400 QHSYPCCWRHKKPIIFRATPQWFISMDKNGLRTQSMKEIKDVQWIPGWGQARIESMVENR 459

Query: 165 YFFRLSAYQDKLLSY-YESHPEFILPIERRNEVI-----SFVKSGLKDLSLSRKTFDWGI 218
             + +S  +   +      H E   P  R  E+I          G++       T   G 
Sbjct: 460 PDWCISRQRTWGVPMSLFIHKETQEPHPRTVELIEEVAKRVEIDGIQAWWDLDATELLGN 519

Query: 219 K--IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIY 274
           +       Q  + VW D+ + + +         G+      ADL++ G D     F +  
Sbjct: 520 EAADYIKAQDTLDVWFDSGSTHSSVVDVRPEFSGNS-----ADLYLEGSDQHRGWFMSSL 574

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
             +  +    P  + +     +  +G K+SKS+GN + P +V+ ++G D LR ++     
Sbjct: 575 MLSTAIKGKAPYRQVLTHGFTVDEQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDY 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES-----DES 389
            G+      + LK+  +A         +  +   +L + +G  P             D  
Sbjct: 635 TGE-IAVSDEILKRSADA------YRRIRNTARFLLANLNGFNPEQHKVKAEDMVVLDRW 687

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAST 446
            +         I +       H  + +++   S      Y D  K  +   K +     +
Sbjct: 688 AVGRAQAAQANILKYYDEYDFHSVVQRLMQFCSVEMGSFYLDIIKDRQYTAKGDSLARRS 747

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                  +   L   +   +   A+++++ L
Sbjct: 748 CQTALFHIAEALVRWMAPIMSFTADEVWNEL 778



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             ++   +     Y N   HIGH+   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  SGKKTFILHDGPPYANGNIHIGHSVNKILKDIVVKSKGLSGYDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +        +     L +   +D    T + +     
Sbjct: 106 VEQIIGKPGEKFSAAEFRAECRKYAMTQVEAQKADFKRLGVLGDWDKPYLTMDFKTEADI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                +I   G + KG     +     +   + EV  
Sbjct: 166 IRALGRIIKNGHLLKGVKPVHWCTDCGSSLAEAEVEY 202


>gi|330722377|gb|EGH00228.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 652

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 99/275 (36%), Gaps = 18/275 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+   + +           +   +PADL++ G D     F +    +  ++   P
Sbjct: 251 LDVWFDSGVTHYSVLR------QREVLQFPADLYLEGSDQHRGWFQSSLKTSMAINGCAP 304

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
               +     +   G K+SKS GNV+ P +V  ++G D LR ++      G+    D+  
Sbjct: 305 YKTVLTHGFVVDANGHKMSKSKGNVMSPQKVANDLGADILRLWVAATDFSGEMSVSDE-- 362

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRE 403
              + +AD    I N     +S  L  +D              D   L   +++  EI +
Sbjct: 363 -ILKRSADSYRRIRNTARFFLS-NLNGFDPATDLVQVEDMLALDRWALDRAAQLQDEIID 420

Query: 404 NMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAI 460
              N   H+   ++ +   V     Y D  K  +   K++     +       +      
Sbjct: 421 AYDNYHFHQIYQKLHNFCVVDMGGFYLDIIKDRQYTAKSDGIARRSAQTALYHLSEAFVR 480

Query: 461 LLQAFVPKLANKIFDILFVADENRCF-QSLDQRLK 494
            +   +   A++I+D +     +  +     ++L 
Sbjct: 481 WIAPILSFTADEIWDQIPGEHRDPVWIAHWYEQLP 515


>gi|322709112|gb|EFZ00688.1| Isoleucyl-tRNA synthetase, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 1017

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 75/455 (16%), Positives = 151/455 (33%), Gaps = 37/455 (8%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD----MADVLDISYDDFI-RTTEKRH 102
               D+ G   A+  +  G+  KV      ++ R     + +   +  D F  R+  +  
Sbjct: 280 PCPVDDKGCFTAEIPEYVGIHVKVADKAIMKDLRPTGRLLVESHIMHVDKFCWRSDTQLI 339

Query: 103 HDTCRILWKKIS-----DKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  + K+         ++          ++++ + N     +  +         P+
Sbjct: 340 RKAVSSWFIKVENSIPQMMENLQDTTSWTPAFVKEKRFANWIANARDWNVSRNRYWGTPI 399

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
                + Y   +       L     H   I  + R       + S              G
Sbjct: 400 PLWVSDDYEEVVCVGSVAELRRLSGHTGEINDLHRDKIDHIIIPS------------QKG 447

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADLHVIGKDIL--RFHAIY 274
             +    + I   W ++      +  Y            +PAD    G D     F+ + 
Sbjct: 448 KGVLRRVEEIFDCWFESGAMPYASIHYPFENHDEFHGGHFPADFIAEGLDQTRGWFYTLT 507

Query: 275 WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                L   LP    + +   +   G+K+SKSL N  DP  + E  G DALR +L+    
Sbjct: 508 VLGNKLFGKLPFRNVLVNGMVLAEDGKKMSKSLKNFPDPSHIFERYGSDALRLYLINSPV 567

Query: 335 CG-KDGFYDKDGLKKRVNADLANGI--GNLVSRSVSMILK----DY--DGMIPTPGAFTE 385
              +   + + G+K+ V+  L          S   ++  K    D+  D    T G    
Sbjct: 568 VKAEPLRFKESGVKEIVSKVLLPLWNSYRFFSEQAALYKKTTGQDFVADITFSTGGLNNV 627

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRA 444
            D  +L+ C  +LQ I + M+   ++  + +++ ++ ++ + Y    +           A
Sbjct: 628 MDRWVLAECQSLLQFIEQEMRGYRVYTVVPRLLKMIDDLTNWYIRFNRKRLKGAAGLGEA 687

Query: 445 STVLY--VTVEVIRQLAILLQAFVPKLANKIFDIL 477
            T       ++V+  L   L  F+P +   I+ +L
Sbjct: 688 DTTAALNTLLQVLFTLVTALAPFIPFITEHIYGLL 722


>gi|298369470|ref|ZP_06980787.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282027|gb|EFI23515.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 930

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 107/277 (38%), Gaps = 19/277 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLK------QREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +       G+     K+
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGE-LAISKE 647

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSRVLQEIR 402
            LK+   +     I N +S  +   L D+D    T       E D   L +  ++ + + 
Sbjct: 648 ILKRVTES--YRRIRNTLS-FLFANLSDFDPFEHTVPQADMVEIDRYALVLARQLQERLA 704

Query: 403 -ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVIRQL 458
            +       H A+  +++  SE     Y D  K      K +     +       + R L
Sbjct: 705 GDFYPRYAFHFAVKDIVAFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHITRSL 764

Query: 459 AILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
            +L+   +     + +DI+   +E+           P
Sbjct: 765 VLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPP 801



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 65/201 (32%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P + +      F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDIAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           S  + K  +   +   + LP 
Sbjct: 226 SGIEGKAFAVIWTTTPWTLPA 246


>gi|256846981|ref|ZP_05552427.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715645|gb|EEU30620.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 931

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 140/388 (36%), Gaps = 29/388 (7%)

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
             +     +RDE     DEV    +      ++      +      R   +   L  +Y 
Sbjct: 412 QWFVSIDKMRDEILKAVDEVKYFPEWGKVRLRNMLKDRGD--WVISRQRVWGVPLPIFYA 469

Query: 182 SHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIKIPDDPQY-------IMYVW 231
                I+  E  N V   ++    ++   R+       G   P  P         IM VW
Sbjct: 470 EDGTPIMTEETINHVADLLREYGSNVWFEREAKDLLPDGFTSPHSPNGEFTKETDIMDVW 529

Query: 232 IDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKK 289
            D+ +++                 +PADL++ G D     F++    + ++S + P    
Sbjct: 530 FDSGSSHQGVLNERSY------LTYPADLYLEGSDQYRGWFNSSMITSVVVSGHAPYKSV 583

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK- 348
           +     +  KG+K+SKSLGNVIDP +V++++G + +R +++       D        ++ 
Sbjct: 584 LSQGFTLDKKGKKMSKSLGNVIDPAKVVQQMGAEIIRLWVMSADTSA-DVRVSMGTFQQI 642

Query: 349 -RVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                 L N    L++ +      D D    +    T  D+ +L   ++ L ++R+    
Sbjct: 643 SEAYRKLRNTFRFLLANTSDF---DADENTVSYEKLTSVDQYMLVKFNQFLAKMRDEFDA 699

Query: 408 QLIHRALAQVISLV--SEVDRYFDAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQA 464
                    +I+ V       Y +  K     +  N     ++  V  +++  L  LL  
Sbjct: 700 YDFLDGYKLLINFVNNDLSAFYMNVAKDVLYIQPANSLERRSMQTVFYQILVGLVKLLTP 759

Query: 465 FVPKLANKIFDILFVADENRCFQSLDQR 492
            +P    +++  +   +E      + + 
Sbjct: 760 ILPHTTEEVWGYMNEPEEFVQLTEIPEA 787



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGHA   I  D + R+  + G    +  G D HG  I   
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              +G   K             +  +  +        L +S  +D    T +K       
Sbjct: 105 LTKSGYDRKKMSTAEFRDLCRKYALEQVQKQMAGFKRLGVSGDWDHPYLTLDKEFEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + KG +Y+     ++S   E+   + EV   
Sbjct: 165 KVFGDFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH 201


>gi|209548081|ref|YP_002279998.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533837|gb|ACI53772.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 963

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPADL++ G D     FH+    + 
Sbjct: 560 WKQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFHSSLLESA 613

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++       D
Sbjct: 614 ATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYA-DD 672

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    I       E ++ +L   + + 
Sbjct: 673 LRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEEI-LLADLPELEQLMLHRLAELD 729

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +REN       +    +I   + E+   YFD +K   L    P   R    L+V  ++
Sbjct: 730 ELVRENYDAFDFKKIARALIDFANVELSAFYFDVRKD-ALYCDAPSSLRRRASLHVIRQI 788

Query: 455 IRQLAILLQAFVPKLANKIF 474
              +   L   +P    + +
Sbjct: 789 FDCMVTWLAPMLPFTTEEAW 808



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 27/230 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           +                      + F     +   +    L I   +D+   T       
Sbjct: 113 EEKYREKGRNKDEVPVNEFRRECREFATGWIKTQAEEFKRLGIEGDFDNPYTTMNFHAES 172

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEG 164
                  KI+  G +Y+G     +S+ +     + EV              PV       
Sbjct: 173 RIAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEVEYQDYESDTIWVKFPV------- 225

Query: 165 YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
                 A          +   + +P  R     + V  GL +++ +   F
Sbjct: 226 --VEGPAALKDAFVVIWTTTPWTIPGNRAVSFSARVSYGLYEVTAAENDF 273


>gi|121634249|ref|YP_974494.1| isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229751|sp|A1KS62|SYI_NEIMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120865955|emb|CAM09692.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131481|gb|EGC54188.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 105/306 (34%), Gaps = 30/306 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +  D     M VW D+ + + +           +   WPADL++ G D     F +   
Sbjct: 524 CEHYDKLSDTMDVWFDSGSTHYSVVK------QREELDWPADLYLEGSDQHRGWFQSSML 577

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                S      K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +      
Sbjct: 578 TGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS--- 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 Y  +    +            +  ++S +  +     P   A  ++D   +   
Sbjct: 635 ----TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRY 690

Query: 395 SRVLQE------IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
           + VL          +       H A+  ++S  SE     Y D  K      K +     
Sbjct: 691 AVVLARQLQERLAGDYYPRYTFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARR 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLH 500
           +       + R L +L+   +     + +DI+   +E+               K    L 
Sbjct: 751 SAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKAEAELV 810

Query: 501 KTFDPI 506
           K +  I
Sbjct: 811 KKWTAI 816



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVACQKKDFIRLGVLGDWDKPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|301166024|emb|CBW25598.1| isoleucyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 1043

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 103/285 (36%), Gaps = 9/285 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y         + +PA+    G D     F+ +   +  L    
Sbjct: 521 VFDCWFESGSMPYAQLHYPFENKEVFDQGYPAEFIAEGLDQTRGWFYTLTVLSTSLFQKP 580

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REIACGKDGFYDK 343
                + +   +   G+K+SKSL N   P  ++EE G DALR +L+   +  G++  +  
Sbjct: 581 AFKNVIVNGLVMAEDGKKMSKSLRNFTPPDSLMEEYGADALRLYLINSGLVRGEEQRFAD 640

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRE 403
            G+K  V   L               +  ++            D+ ++S    + + I +
Sbjct: 641 SGVKDMVRRALLPWFNAFKFFQTYAEVDGWNVSEHYNEGDNIVDQWVVSKLQTMKRNIAK 700

Query: 404 NMQNQLIHRALAQVISLV-SEVDRYF--DAQKPWELKKTNPDRASTVLYVTVEVIRQLAI 460
            M+   ++  +  + + +    + Y   +  + W  +  N D+ +        V+ +++ 
Sbjct: 701 EMEAYKLYNVVPALFNFIEDLTNWYIRLNRSRFWG-EGLNEDKCAA-YSTLHYVLTEVSK 758

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGFMLHKTFDP 505
            +  F P L+   +  L   + N   +S+     P     +   P
Sbjct: 759 CMAPFAPFLSEFTYAELKKFNANETMESVHLCDYP-VAKEEKIKP 802



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 50/148 (33%), Gaps = 23/148 (15%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++++         +    PH GH     + D++ R+  + G  V    G D HG  +   
Sbjct: 39  RDKKPYIFYDGPPFATGLPHHGHLLASTLKDIVPRYWTMKGRYVERRFGWDCHGLPVEHE 98

Query: 62  AQNA---------------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                                        + + ++  +    +   +D   D   +T + 
Sbjct: 99  IDKKLGMSAQDAVEKLGVKAYNDECRGIVQRYTNEWEKTVSRIGRWVDFENDY--KTMDP 156

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWY 128
              ++C  ++K++ +K  +Y+G     +
Sbjct: 157 TFMESCWWVFKQLWEKDLVYQGTKVVPF 184


>gi|296123966|ref|YP_003631744.1| leucyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016306|gb|ADG69545.1| leucyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 936

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 3/128 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K+Y+     YP+    H+GH       D+  RF R+ G +VL   G D  G    + 
Sbjct: 30  SKPKMYVLDMFPYPSGDGLHVGHPEGYTATDITCRFARMRGKNVLHPMGWDAFGLPAEQY 89

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   ++  ++N   F+     L  SYD    + TT+  +    + ++ ++ D    
Sbjct: 90  AVETGTHPRITTEKNIATFKRQLKSLGFSYDWERELATTDPDYVRWTQWIFLQLFDTWYD 149

Query: 120 YKGCYSGW 127
               ++G 
Sbjct: 150 ETCEWTGP 157



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 78/203 (38%), Gaps = 33/203 (16%)

Query: 302 KISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNL 361
           K+SK+  NVI+P +V+E+ G D+LR + +          +   G++         GI   
Sbjct: 704 KMSKARRNVINPDQVVEQYGADSLRLYEMFMGPLEATKPWSMSGVE---------GIYRF 754

Query: 362 VSRSVSMILKDYDGMIPTPGAFTESDESILS--VCSRVLQEIRENMQNQLIHRALAQVIS 419
           + R   +I+ D    +         + S     +  + ++ + ++++    + A+++++ 
Sbjct: 755 LGRVWRLIVDDQLDQVVLNSKVQPVEPSPAQNRILHKTIKAVTDDIERLSFNTAISRMME 814

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
            V+E                    A+ V       + +  +L+    P LA +++++L  
Sbjct: 815 FVNEF------------------TAADVRPKI--AMEKFVLLISPMAPHLAEELWEVLGH 854

Query: 480 ADEN--RCFQSLDQRLKPGFMLH 500
                   +   D+ L     + 
Sbjct: 855 EKSLAYEPWPEFDETLLEEATIE 877


>gi|145297754|ref|YP_001140595.1| isoleucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166200195|sp|A4SIX5|SYI_AERS4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|142850526|gb|ABO88847.1| isoleucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 953

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/415 (15%), Positives = 126/415 (30%), Gaps = 36/415 (8%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           SY    R             +  +  KG               E    D     G  G  
Sbjct: 407 SYPHCWRHKTPIIFRATPQWFISMEQKGLR------QRALEEIERIEKDGITQHGQSGWV 460

Query: 150 YNAQHNPVQWM---EEEGYFFRLSAYQDKLLSYYESHPEFILPIE---RRNEVISFVKSG 203
                N +Q M     +    R   +   +  +     + + P              +SG
Sbjct: 461 PAWGKNRIQAMVENRPDWCISRQRTWGVPISLFVHKETQQLHPESVRLMHEVAKRVEQSG 520

Query: 204 LKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           ++      K    G       +    + VW D+ + + +        +G       ADL+
Sbjct: 521 IQAWWDLDKAELLGSDADMYDKVPDTLDVWFDSGSTHSSVVDARPEFNGHS-----ADLY 575

Query: 262 VIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + G D     F +       +    P  + +     +  +G K+SKS+GNV+ P +V+ +
Sbjct: 576 LEGSDQHRGWFMSSLMIGVAMKDKAPYNQVLTHGFTVDGQGRKMSKSIGNVVSPQDVMNK 635

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +G D LR ++      G+      + LK+  +A         +  +   +L + +G  P 
Sbjct: 636 LGADILRLWVASTDYTGEMTV-SDEILKRSADA------YRRIRNTARFLLANLNGFNPA 688

Query: 380 PGAFTES-----DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQK 432
                 +     D   +        EI    +    H    +++   S      Y D  K
Sbjct: 689 TDMVAAADMVVVDRWAVGRAKAAQAEIVTAFEEYNFHGVTQKLMQFCSIEMGSFYLDVIK 748

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
             +   K +     +       + + +   +   +   A++I+ +L        F
Sbjct: 749 DRQYTAKADSLARRSCQTALYHIAQAMVRWMAPIMSFTADEIWALLPGERSEFVF 803



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGH+   I+ DV+ +   L G D  +  G D HG  I    
Sbjct: 47  GKPSFILHDGPPYANGSIHIGHSVNKILKDVIIKSKGLSGFDSPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT------KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRIL------- 109
           +              F  +  +  +   +     +       +  H              
Sbjct: 107 EGMVGKPGEKVSAAEFRAECRKYAKTQIEAQKTDFIRLGVLGDWEHPYLTMDFGTEANII 166

Query: 110 --WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               KI + G ++KG     +     +   + EV  
Sbjct: 167 RSMAKIVENGHLHKGSKPVHWCTDCGSALAEAEVEY 202


>gi|312874547|ref|ZP_07734572.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921150|ref|ZP_08277672.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311089938|gb|EFQ48357.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|328934788|gb|EGG31279.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 928

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 107/281 (38%), Gaps = 23/281 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               + I+ VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 517 FTKEKDILDVWFDSGSSHTAVMAQRP------ELSYPADLYLEGSDQYRGWFNSSLITSV 570

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P  + +     +  KG K+SKSLGNVI P +VI+++G + +R ++        D
Sbjct: 571 AISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVIKQMGAEIIRLWVAGADT-TSD 629

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
               +D LK+      A      V  ++  +L +     P          +  D+ +   
Sbjct: 630 VAVSQDILKQ------AAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVK 683

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
            +++L E  +   +         V S +       Y D  K     ++   +A   +   
Sbjct: 684 LNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTV 743

Query: 452 VE-VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQ 491
           +   + +LA LL   +P    +I+  L   ++      + +
Sbjct: 744 IYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTDMPE 784



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +   +  +     + N   H+GHA   I  D++ R+  + G    F  G D HG  I + 
Sbjct: 45  EGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R       +  I               ++    T + +      
Sbjct: 105 LAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ ++ +KG IYKG    ++S   E+   + EV  
Sbjct: 165 RVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEY 200


>gi|320107100|ref|YP_004182690.1| isoleucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319925621|gb|ADV82696.1| isoleucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 956

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/436 (15%), Positives = 130/436 (29%), Gaps = 56/436 (12%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISD---KGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           SY    R      +      +  +       D     Y       DE      +   G +
Sbjct: 412 SYPHCWRCHRPVIYRATEQWFIGMETPVTTVDGLPTTYRQKAL--DEIAKVTWDPSWGQE 469

Query: 147 GQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE----------- 195
                    P      +    R   +   +  +        L   + N            
Sbjct: 470 RISNMIATRP------DWCISRQRIWGVPIAVFLCQKCSAPLQDAKINATAVSLFEREGA 523

Query: 196 --VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
                +    L     S  T   G         I+ VW ++  +      +    +    
Sbjct: 524 DAWYRYPAEELLPAGTSCGT--CGSTEFRKEMDILDVWFESGAS------WNAVLETEPE 575

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
             +PADL+  G D     FH+    +  +    P      S   +  +    SKSLGN +
Sbjct: 576 LRFPADLYTEGGDQHRGWFHSSLLSSVGIRDIAPYKYVATSGWTLDEQRRAFSKSLGNGV 635

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRV-NADLANGIGNLVSRSVSMIL 370
           DP+ V++++G D +R ++           + +D +        LA  I   +  +   +L
Sbjct: 636 DPVAVMDQLGGDIVRLWVAS-------VDFREDVIASVPLMKRLAEEIYRKLRNTFRFLL 688

Query: 371 KDYDGMIPTPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSE 423
            + DG +P             D+ +L+  + +++++R +      HRA   +        
Sbjct: 689 GNLDGFVPAEDEVAWNDMQPLDKYMLARAAELVKKVRASYDAFEFHRAYHAINEFGNAEL 748

Query: 424 VDRYFDAQKPWEL----KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFV 479
              Y D  K        K      A T ++   E +     L    +   A+++++ +  
Sbjct: 749 SAFYLDVLKDRLYTLAPKSIERRSAQTAIWKITEAL---VRLTAPVLSFTADEVWEHMPP 805

Query: 480 ADENRCFQSLDQRLKP 495
            +       +    KP
Sbjct: 806 VEGRESSVHIAFFPKP 821



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 15/156 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N Q H+GHA    I D + +   + G D  +  G D HG  I      
Sbjct: 62  EKYILHDGPPYANGQIHLGHALNKCIKDFIVKSKTMAGYDAPYVPGWDCHGLPIEIKVDE 121

Query: 65  AGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
                K              +  +     R     + +   ++    T    +       
Sbjct: 122 QLGRKKLEMDSLTVRRLCREYAQKYVDLQRSQFVRMGVLGRWERPYLTMTDAYEAKILST 181

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
           + +  +KG +YKG    ++ + D+    + EV    
Sbjct: 182 FYEFYEKGFVYKGLRPVYWCMHDKTALAEAEVEYEM 217


>gi|325690192|gb|EGD32196.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 930

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 102/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTISPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILGQVSET------YRKIRNTLRFLIANTSDFNPVEDAVAYEDLRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFVLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        ++    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTSDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|298207491|ref|YP_003715670.1| leucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850127|gb|EAP87995.1| leucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 944

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
            E+ K Y+     YP+    H+GH    I +D+ AR+ R  G +VL   G D  G    +
Sbjct: 29  SEKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRHKGFNVLHPQGYDSFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   ++  ++N + +R   D +  S+D    +RT+E   +   + ++ ++ +   
Sbjct: 89  YAIQTGQHPRITTEENIKTYRRQLDQIGFSFDWSRELRTSEPEFYKWTQWIFTELFNHYY 148



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 76/190 (40%), Gaps = 33/190 (17%)

Query: 298 HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANG 357
           H+ EK+SKS  NV++P ++  + G D LR + +      +   ++  G+    +      
Sbjct: 715 HEVEKMSKSKYNVVNPDDICAQYGADTLRLYEMFLGPLEQAKPWNTAGITGVHS--FLKK 772

Query: 358 IGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQV 417
           +  L         ++++     P   +      L    + ++++ E+++N   + +++  
Sbjct: 773 LWKLYHN-----GENFEVTDAEPNKES------LKTLHKTIKKVEEDIENFSFNTSVSTF 821

Query: 418 ISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +  V+E                     S+    +  ++  LA+L+  + P +A ++++ L
Sbjct: 822 MIAVNE--------------------LSSQKCNSRAILEPLAVLISPYAPHIAEELWEKL 861

Query: 478 FVADENRCFQ 487
             +      +
Sbjct: 862 GHSTSIATAE 871


>gi|294084713|ref|YP_003551471.1| isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664286|gb|ADE39387.1| Isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 933

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 97/263 (36%), Gaps = 16/263 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +                  PADL++ G D     FH+    +       
Sbjct: 544 ILDVWFDSGSTHAFVLE------NRDDLESPADLYLEGSDQHRGWFHSSLLQSCSTRGKA 597

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +  +G K+SKSLGNVI P +++E+ G D LR ++V       D     +
Sbjct: 598 PYKGVLTHGFVLDEQGRKMSKSLGNVITPQKIMEQNGADILRLWVVSSDY-YNDLRIGNE 656

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +++    D      N +   +  +    D          + +  +L+  + +   IR+ 
Sbjct: 657 IIQR--MTDNYRRFRNTLRYLLGALDGFDDAERVDYADMPDLERWVLNRLAEIDANIRKM 714

Query: 405 MQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAI 460
            +N   H    ++ +L        YF+ +K   L   +PD         V  E+  +L  
Sbjct: 715 TENYDFHGIFTELHTLCNSDLSAFYFEIRKD-RLYCDDPDSIARRACRTVMAEIFDRLTA 773

Query: 461 LLQAFVPKLANKIFDILFVADEN 483
            L   +   A + +       EN
Sbjct: 774 WLAPILCFTAEEAWQSRVGDPEN 796



 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 53/171 (30%), Gaps = 18/171 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N Q HIGHA   I+ DV+ R   + G D  +  G D HG  I    + 
Sbjct: 53  EKFVLHDGPPYANGQLHIGHALNKILKDVVNRSQSMLGKDANYVPGWDCHGLPIEWKIEE 112

Query: 65  A----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
                                + F         +    L +   +D+   T       T 
Sbjct: 113 QYRKKGKDKDEVPVAEFRQECRDFAAHWLGVQSEEFQRLGVLGDWDNPYTTMAYESEATI 172

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                KI   G +Y+G     +S  ++    + E+              PV
Sbjct: 173 AAELGKILMDGSLYRGTKPVMWSPVEKTALAEAEIEYEDHTSVTIHARFPV 223


>gi|312113630|ref|YP_004011226.1| isoleucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218759|gb|ADP70127.1| isoleucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 1039

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 93/254 (36%), Gaps = 16/254 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +                 WPADL++ G D     F +    +       
Sbjct: 638 ILDVWFDSGSTHAFVLEKRP------DLKWPADLYLEGSDQHRGWFQSSLLESCGTRGRA 691

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +        +G K+SKSLGN + P ++I++ G D LR + +      +D      
Sbjct: 692 PFDTVLTHGFVNDEQGRKMSKSLGNTVAPQDIIKQSGADILRLWALSSDY-TEDLRIGPQ 750

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            ++  V  D    + N +   +  +     G         E +  IL   + +  E+R  
Sbjct: 751 IIQSAV--DAYRKLRNTLRYVLGNLAHYEPGHDVAVAEMPELERYILHRVAEIDAELRAA 808

Query: 405 MQNQLIHRALAQVISLV-SEVDR-YFDAQKPWEL--KKTNPDRASTVLYVTVEVIRQLAI 460
                  +A   +     +++   YFD +K        ++P R +++  V   +   L  
Sbjct: 809 YNAFDFRKAYRVLAEFCSNDLSAIYFDIRKDTLYCEAHSSPKRRASL-TVLNTLFEALTA 867

Query: 461 LLQAFVPKLANKIF 474
            L   +P  A + +
Sbjct: 868 WLAPILPFTAEEAW 881



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 66/237 (27%), Gaps = 31/237 (13%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
             REK  +     Y N   HIG     I+ D + R  ++ G D  +  G D HG  I   
Sbjct: 79  SGREKFVLHDGPPYANGNIHIGTGLNKILKDAIVRSQQMQGKDANYVPGWDCHGLPIEWK 138

Query: 62  AQNA----------------GVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHH 103
            +                      + F  +           L +  D  +   T      
Sbjct: 139 VEEQYRAKGKNKDEVPVNSFRRQCREFAAKWIGVQMAEFKRLGVEGDWPNHYSTMAFEAE 198

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD---------GQYYNAQH 154
            T      K +  G +Y+G     +S+ +     + EV                 Y  Q 
Sbjct: 199 ATIAGELMKFAMNGLLYRGSKPVMWSVVERTALAEAEVEYHEHASAAIYVKFPLRYVPQV 258

Query: 155 NPVQWMEEEGYFFRLSAYQDKLLSY----YESHPEFILPIERRNEVISFVKSGLKDL 207
            P     + G       + ++          +   + +P  R       +  GL ++
Sbjct: 259 APFVLHNQPGIPLHGEKWTEEETRRTSIVIWTTTPWTIPANRAISYSRRIGYGLYEV 315


>gi|221135353|ref|ZP_03561656.1| isoleucyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 941

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 126/400 (31%), Gaps = 47/400 (11%)

Query: 120 YKGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQD 174
           Y+  Y   +  +    +       V    +G   +   +    QW+ E G     +  + 
Sbjct: 401 YEHSYPHCWRHKTPIIFRATPQWFVSMDKNGLRSSSLEEIKQTQWIPEWGEARISTMVEG 460

Query: 175 KLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF---DWGIKIPDD-------- 223
           +          + +PI      ++          +        + GI+   D        
Sbjct: 461 RPDWCISRQRTWGVPIPLFIHGVTGELHPRSTDIMETVALAVENKGIQAWWDFSAEELLG 520

Query: 224 --------PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+   +       D+   S      ADL++ G D     F + 
Sbjct: 521 DEAADYEKVTDTLDVWFDSGVTHSFVVDRRDDIPAS------ADLYLEGSDQHRGWFMSS 574

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +  + P  + +     +   G K+SKS+GNV+ P EV  + G D LR ++    
Sbjct: 575 LMSSVAMHGHAPYKQVLTHGFTVDQHGRKMSKSVGNVVAPQEVFNKYGADILRLWVASTD 634

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
               +     + LK+  +A         +  +   +L +  G  P      P      D 
Sbjct: 635 Y-RSEIAVSDEILKRSADA------YRRIRNTARFLLANLSGFNPATDCVAPEDMVALDS 687

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAS 445
             ++       EI    +   +     +++    +     Y D  K  +   K +     
Sbjct: 688 WAMAKAQTTQNEIIAAYEKYDLLVVTQKLMQFCSIDMGSLYLDIIKDRQYTAKADGLARR 747

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +       +++ +   +       A +I+++L  AD+N  
Sbjct: 748 SCQTALYHIVQAMVRWMAPITSFTAQEIWEVLPQADQNTD 787



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 9/100 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +    +     Y N   HIGHA   I+ DV+ +   L   D  +  G D HG  I    
Sbjct: 47  GKTPFILHDGPPYANGDIHIGHAVNKILKDVIVKSKTLSDFDAPYVPGWDCHGLPIELMV 106

Query: 63  Q------NAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +         VT   F ++         +       DFIR
Sbjct: 107 EKKVGKPGKKVTAAEFREKCRAYAERQIEG---QKKDFIR 143


>gi|242242475|ref|ZP_04796920.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234049|gb|EES36361.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 916

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRH------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LVDMTKLLAPILVHTAEEVWSH 770



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 16/160 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMKGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDFIR---TTEKRHHDTC 106
               GV              K F  +     +     L +  D FI    T    +    
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGD-FINPYITLTPEYEAAQ 163

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|251810623|ref|ZP_04825096.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876376|ref|ZP_06285243.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805783|gb|EES58440.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295401|gb|EFA87928.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 916

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHCGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LIDMTKLLAPILVHTAEEVWSH 770



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|194097685|ref|YP_002000725.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|254782423|sp|B4RPY6|SYI_NEIG2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193932975|gb|ACF28799.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVPQAEMVEIDRYALVLARRLQE 700

Query: 400 EIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +          H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|157964837|ref|YP_001499661.1| valyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844613|gb|ABV85114.1| Valyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 841

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 116/335 (34%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E +   +S         Y   P  +   +R  E    + + +  L +           K 
Sbjct: 417 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADVTQLPIDPLKDLPMGYSKE 476

Query: 221 PDDPQY-IMYVWIDALTNYLTTTG----YLDNPDGSKAKFWPADLHVIGKDILRFHAIY- 274
             +P Y +M  W  +  +   +T               K +P  L     +I+R  A Y 
Sbjct: 477 EVEPDYEVMDTWATSSVSPQLSTHGISDDFAINKDRHDKLFPMHLRPQAHEIIRTWAFYT 536

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 537 ILKAHLHQNTLPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 596

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAFTESD 387
             G D  Y +D +K      L N + N           +    K    +        E D
Sbjct: 597 -LGADTAYSEDIMKN--GKRLVNKLWNAAKFVSIHFDKLKGEDKKASLLDIKEKITNEFD 653

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTN--PDR 443
           + +++    +++     +QN     A+            D Y +  K     + N  P  
Sbjct: 654 KWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVFCDNYLEISKTRSYDEENKNPQG 713

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 714 QYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 748



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 15/177 (8%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 62  VAKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 121

Query: 61  AAQNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                      V+     FR + + + +S D     +T        
Sbjct: 122 LVEKQKQIKAYNMERSEFIKICAEVVESEEEKFRSLFNQIAVSVDWSLEYQTISPLSRKI 181

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++ +  +  K +IY+      +   D       ++       + N      +  + 
Sbjct: 182 SQMSFLDLVQKKEIYRANQPILWDPVDGTALAQADIEDKQKTSFMNYITFKTEQGDP 238


>gi|322372695|ref|ZP_08047231.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
 gi|321277737|gb|EFX54806.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
          Length = 932

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 107/276 (38%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKENDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDTTND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +   +         +  ++  ++ +     PT  A         D+ +   
Sbjct: 631 VRISMDILSQVSES------YRKIRNTLRFLIANTSDFNPTTDAVAFEELRSVDQYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++ ++ E+   Y D  K     ++       +  TV
Sbjct: 685 FNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESADSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFETEE 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D+   T    +     
Sbjct: 105 LAKKGVKRKEIERSEYLKMCRDYALSQVDKQREDFKRLGVSADWDNPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH 201


>gi|194246835|ref|YP_002004474.1| leucyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807192|emb|CAP18633.1| Leucyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 811

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 3/181 (1%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y      YP+A+  H+GH      +D+ +RF ++ G +VL   G D  G    + 
Sbjct: 32  DKKKFYCLDMFPYPSAEGLHVGHIEGYTASDIFSRFKKMQGYNVLHPFGWDSFGLPAEQY 91

Query: 62  AQNAGVTTKVFVDQNSRNFRDMA--DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G   + F  +N +NF++        + +D  + T++   +   + ++KK+  K   
Sbjct: 92  ALKTGNNPRNFTYENIKNFKEQIIKMGKGVDWDKELATSDNDFYHWTQWIFKKLYQKNLA 151

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
                   +         ++E+       +      PV     + +  +++ Y ++LL  
Sbjct: 152 VLKDLEVNFCEGLGTVLANEEIVSKDGKLFSERGDFPVVKKTLKQWVLKITDYAERLLDD 211

Query: 180 Y 180
            
Sbjct: 212 L 212



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 91/241 (37%), Gaps = 47/241 (19%)

Query: 257 PADLHVIGKDILRFHAI---YWPAFLLSANL-----PLPKKVFSHGFILHKGEKISKSLG 308
           P DL++ G +    H +   +W   L    L     P  K +     + +   K+SKS G
Sbjct: 535 PVDLYIGGAEHSTGHLLCVRFWHKVLYDLGLVSTKEPFKKIIHQGIILGNDNTKMSKSKG 594

Query: 309 NVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSM 368
           N +    ++++ G D LR + +          +    +K  +       + N+ +  ++ 
Sbjct: 595 NGVSAKLMLDQYGADVLRLYEMFLGPLSDTKIWSYKNIKGSI--KFLERVYNIFNFEITT 652

Query: 369 ILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYF 428
           I +                + +  +    ++++ +  +    + A++Q++  V+EV ++ 
Sbjct: 653 INQ----------------KELEFLYHTTVKKVTDLYEKLKFNVAISQLMIFVNEVYKH- 695

Query: 429 DAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQS 488
                   KK +  +A           R    LL    P L  ++ + LF+ ++  CF S
Sbjct: 696 --------KKISKYQA-----------RGFLKLLNPIAPHLTEEL-NQLFLNEKPICFSS 735

Query: 489 L 489
            
Sbjct: 736 F 736


>gi|308389936|gb|ADO32256.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis
           alpha710]
          Length = 929

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 107/296 (36%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +  +       H A+ +++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELVKKWTAI 816



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDRPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|261349975|ref|ZP_05975392.1| leucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860758|gb|EFC93056.1| leucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 951

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 80/446 (17%), Positives = 146/446 (32%), Gaps = 60/446 (13%)

Query: 99  EKRHHDTCRILWKKISDKGDIYKG--CYSGWYSLRDEAYYNDDEVYKGA---------DG 147
           + + HD    L+K    KG I +    Y G         +  D + K             
Sbjct: 371 DPKLHDATNELYKVEHRKGIISEHIPEYGGKKVAIAREEFKADMIDKNMATTMYDFAERP 430

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDL 207
                  + V  + +  +F + S  +    ++   + E I+P E +N    +    L D 
Sbjct: 431 VICRCGEDCVVKIMDNQWFLKYSDEEWTAKTHEVLNGETIIPKEVKNN-FEYYIDWLDDW 489

Query: 208 SLSRKTFDWGIKIPDDPQYIMYVWIDALT--NYLTTTGYLDNP----------------- 248
           + SR     G ++P D Q+++    D+    +Y T   YL N                  
Sbjct: 490 ACSR-NVGLGTRLPWDNQWLIEPLTDSTIYMSYYTIAKYLRNMNADDLNPAFFDKVLLDI 548

Query: 249 ---------------DGSKAKFWPADLHVIGKDILRFHAIYWPAFL--LSANLPLPKKVF 291
                                ++P D  +  KD++  H  +       +      P+   
Sbjct: 549 DSDDVKVDDETVKEIQDEFNYWYPLDWRLSAKDLVGNHLSFLMFHHSAIYPKEKWPRGTV 608

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
             G  L +G K+S S GNVI   + IE+   D +R FL+      +D  + +  +     
Sbjct: 609 VFGMGLLEGNKMSSSKGNVILLKDAIEQYSADVVRLFLMASAEPWQDFDWREKEVLGTKR 668

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-ESDESILSVCSRVLQEIRENMQNQLI 410
                      ++   +     D             D  +LS  ++ ++E  E +     
Sbjct: 669 R--LEWFREFAAKVEEVKNSPLDLTNIEKVELNRTIDIWMLSQLNQHIKEATEALDGFQT 726

Query: 411 HRALAQ-VISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
            +AL + +  L  +VD Y    K   L   +P     ++YV   V+     LL  F P  
Sbjct: 727 RKALQESLFLLKKDVDHYLYRVKH-LLDSQDP----AIIYVLSTVLEAWIRLLAPFTPHT 781

Query: 470 ANKIFDILFVAD--ENRCFQSLDQRL 493
             +++             +   D+ L
Sbjct: 782 CEELWATYGGEGYVSQASWPEADESL 807



 Score = 97.2 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 65/170 (38%), Gaps = 30/170 (17%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
           ++EKL+++ A  YP+   HIGH     + DV ARF R++G +VLF       G  +    
Sbjct: 25  DKEKLFLTVAFPYPSGAMHIGHGRTYTVPDVYARFKRMEGYNVLFPMAWHVTGAPVIGIA 84

Query: 59  AKAAQNAGVT----------TKV--------------FVDQNSRNFRDMADVLDISYDDF 94
            +  +    T           K               F  + +    DM     I +   
Sbjct: 85  ERVRRKDPWTLDLYENVHKVPKEELPNLADPEYIVRYFSSEYNEVMHDMGYS--IDWRRE 142

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            RT +  +         K+ DKG I KG +   Y  RD+    D ++ +G
Sbjct: 143 FRTIDPTYKKFVEWQISKLKDKGLIIKGEHPVKYCPRDKNPVGDHDLLEG 192


>gi|73662887|ref|YP_301668.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|84029568|sp|Q49WX5|SYI_STAS1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72495402|dbj|BAE18723.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 916

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 131/349 (37%), Gaps = 26/349 (7%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT---FDWGIK 219
           E    R   +   L  +Y  + + I+  E  N V    ++   ++   R+       G  
Sbjct: 450 EWVISRQRVWGVPLPVFYAENGDIIMTSETVNHVADLFEANGSNIWFEREAKDLLPEGFT 509

Query: 220 IPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
            P  P         IM VW D+ +++                 +PADL++ G D     F
Sbjct: 510 HPGSPNGEFTKETDIMDVWFDSGSSHRGVLEARP------ELSYPADLYLEGSDQYRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    +       P    +     +  +G+K+SKSLGNVI P +++++ G D  R ++ 
Sbjct: 564 NSSITTSVATRGQSPYKMLLSHGFVMDGEGKKMSKSLGNVIVPDQIVKQKGADIARLWV- 622

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-TPGAFTESDES 389
             +    D     + LK+   +D+   I N +   +  +                E D+ 
Sbjct: 623 SSVDYLADVRISDEILKQS--SDVYRKIRNTLRFMLGNVSDYNPATDAIAEKDLLEVDKY 680

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT-NPDRAST 446
           +L+          ++  N        +V + ++    + Y D  K     +  +  +  +
Sbjct: 681 LLNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYGKDILYIEERDSHKRRS 740

Query: 447 VLYVTVEVIRQLAILLQAFVPKLANKIFDILF-VADENRCFQSLDQRLK 494
           +  V  +++  +  LL   +   A +++  +  V +E+    ++ +R++
Sbjct: 741 MQTVLYQIVVDMTKLLAPILVHTAEEVWSHIPHVEEESVHLTNMPERVE 789



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +      +     Y N   H+GHA   I+ D++ R+  + G    +  G D HG  I +A
Sbjct: 45  EGNPSFILHDGPPYANGNLHMGHALNKILKDIITRYKSMLGYYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F  +   N +     L +   +++   T +  +     
Sbjct: 105 LTKKGVKRKELSIAEFRKKCEAFALEQIDNQKKDFKRLGVKGDFNNPYITLKPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            L+ +++DKG IYKG    ++S   E+   + E+  
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEY 200


>gi|52425806|ref|YP_088943.1| isoleucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81825491|sp|Q65RQ2|SYI_MANSM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52307858|gb|AAU38358.1| IleS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 938

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 129/392 (32%), Gaps = 46/392 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
            +  Y   +  +    +    + + G + Q    Q       V+W+ + G        ++
Sbjct: 406 IRHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALSEIKKVRWIPDWGQARIEKMVEN 465

Query: 175 KLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQ------ 225
           +          + +P+      E        L+ +    K     GI+   D        
Sbjct: 466 RPDWCISRQRTWGVPVALFIHKETEQLHPRTLELIEEVAKLVERKGIQAWWDLDAKDLLG 525

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + Y +        +G +     AD+++ G D     F + 
Sbjct: 526 DDAAHYSKVPDTLDVWFDSGSTYYSVVKNRPEFNGKE-----ADMYLEGSDQHRGWFMSS 580

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +       P  + +     +  +G K+SKS+GN++ P EV+++ G D LR ++    
Sbjct: 581 LMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTD 640

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDE 388
             G+    D+  + KR     A      +  +   +L + +G  P             D 
Sbjct: 641 YTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVQAHEMISLDR 693

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
             +    R   EI+E   N   H  + +++   S      Y D  K  +   K +     
Sbjct: 694 WAVDCAFRAQAEIKEAYDNYQFHTVVQRLMKFCSVEMGSFYLDIIKDRQYTTKADSLARR 753

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           +       +   L   +   +   A++I+  L
Sbjct: 754 SCQTALWHIAEALVRWMAPILSFTADEIWGYL 785



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 53  KGKKSFILHDGPPYANGSIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELK 112

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +   +D+   T         
Sbjct: 113 VEGLVGKPNQKISAAQFREECRKYAREQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANI 172

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + K    G +YKG     + L   +   + EV  
Sbjct: 173 IRAFGKAVANGHLYKGSKPVHWCLDCASSLAEAEVEY 209


>gi|227509388|ref|ZP_03939437.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191100|gb|EEI71167.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 942

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 20/284 (7%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 528 FTKENDIMDVWFDSGSSHQGVLAARP------ELTYPADMYLEGSDQYRGWFNSSLITSV 581

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P    V     +  KG K+SKSLGN I PI++I+++G + +R ++        D
Sbjct: 582 AVSNKAPYKSIVSQGFTLDGKGHKMSKSLGNTIAPIDIIKKMGAEIVRLWVTSVDTSA-D 640

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSR 396
               ++   K   +D    I N + R +     D+D              D+ +  + ++
Sbjct: 641 VRVSQENFVKI--SDAYKKIRNTM-RFLLANTSDFDPKTNAVAFDEMESQDQYMTVLLNK 697

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVE 453
            L E R++ +         + ++ V       Y D  K      K +  +  ++  V   
Sbjct: 698 FLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKKDGHKRRSMQTVMYH 757

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPGF 497
            +  L  L+   +P  A +I+  L    E   F  L    KP  
Sbjct: 758 AVTTLTKLMTPVLPHTAEEIWGFL---KEPEDFVQLTDIPKPQH 798



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 52  EGKPSFVLHDGPPYANGDIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQK 111

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              AG               + +  +  +   D    L +S  +D    T +        
Sbjct: 112 LTQAGYDRKKMSTNDFRKLCQEYAMKQVQRQMDEFKRLGVSGDWDHPYLTLQHEFEAAEV 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +G IYKG    ++S   E+   + EV   
Sbjct: 172 RVFGAFAKRGLIYKGKKPVYWSWSSESALAEAEVEYH 208


>gi|306824773|ref|ZP_07458117.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432984|gb|EFM35956.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 24/283 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++              D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDAVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQR 492
             +++ ++  LL   +P  A +I+  L F A+E      L + 
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAEEFVQLSELPEA 787



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|195592354|ref|XP_002085900.1| GD15025 [Drosophila simulans]
 gi|194197909|gb|EDX11485.1| GD15025 [Drosophila simulans]
          Length = 1229

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 99/281 (35%), Gaps = 17/281 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       +    +      +PAD    G D     F+ +   +  L    
Sbjct: 533 VFDCWFESGSMPFAQQHFPFENEKDFMNNFPADFIAEGIDQTRGWFYTLLVISTALFNKA 592

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + S   +   G+K+SK   N  DP+EV+ + G DALR +L+       +    K+
Sbjct: 593 PFKNLIASGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINSPVVRAESLRFKE 652

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILK--------------DYDGMIPTPGAFTESDESI 390
              + +  D+     N     +  I++              D +  +      +  D  I
Sbjct: 653 EGVRDIIKDVFLPWYNAYRFLLQNIVRYEKEDLAGNGQYTYDRERHLKNMDKASVIDVWI 712

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +L+     M+   ++  + ++   + ++ + Y    +     +   D+    L 
Sbjct: 713 LSFKESLLEFFATEMKMYRLYTVVPRLTKFIDQLTNWYVRLNRRRIKGELGADQCIQSLD 772

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              +V+  +  ++  F P L   IF  L +       +  D
Sbjct: 773 TLYDVLYTMVKMMAPFTPYLTEYIFQRLVLFQPAGTLEHAD 813



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 74/233 (31%), Gaps = 23/233 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 44  KGKPKYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAYQQGYHVDRRFGWDCHGLPVEFE 103

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRH 102
                        A +    +  +  +     AD  +         I + +  +T    +
Sbjct: 104 IDKLLNIKGPEDVAKMGIAAYNAECRKIVMRYADEWENVVTRVGRWIDFKNDYKTLYPWY 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ DKG +Y+G     YS       ++ E  +             ++ +  
Sbjct: 164 MESIWWIFKQLFDKGLVYQGVKVMPYSTACTTSLSNFEANQNYKEVVDPCVVVALEAVSL 223

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTF 214
              FF +            S+    + P     +V       L  L+ SR ++
Sbjct: 224 PNTFFLV---WTTTPWTLPSNFACCVHPTMTYVKVRDVKSDRLFVLAESRLSY 273


>gi|149011480|ref|ZP_01832727.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764470|gb|EDK71401.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 104/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++        N        +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVLVNRPN------LTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     PT  A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPTQDAVAYDELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G +  +  G D HG  I + 
Sbjct: 45  EGKPHFVLHDGPPYANGNIHVGHAMNHISKDIIIRSKSMSGFNAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        RD    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVYKQRDDFKRLGMSGDWENLYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|117921574|ref|YP_870766.1| isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166229771|sp|A0KZZ1|SYI_SHESA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117613906|gb|ABK49360.1| Isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 940

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 126/406 (31%), Gaps = 48/406 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D Q    Q        QW+ + G      
Sbjct: 398 HHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNQNLRKQALSEIEQTQWIPDWGQSRIEK 457

Query: 171 AYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
             +++          + +P    + R  E +      L     +R     GI+   D   
Sbjct: 458 MVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMARVANRIE-QEGIQAWWDLDA 516

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                            + VW D+ + + +  G      G        DL++ G D    
Sbjct: 517 AELLGEEAEQYRKVTDTLDVWYDSGSTFASVVGARPEFHGHG-----VDLYLEGSDQHRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +  ++   P  + +     +  KG K+SKS+GNVI P +V  ++G D LR +
Sbjct: 572 WFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLW 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AF 383
           +           Y  +        + +      +  +   +L + +G  P          
Sbjct: 632 VAA-------TDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNGFDPAKDLVAVEDM 684

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTN 440
              D   +   + + QEI E  +    H    +++   S      Y D  K  +   K  
Sbjct: 685 VALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQE 744

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                +       +   +   +   +   A++++ +L    +   F
Sbjct: 745 GHARRSCQSALFHIAEAMVRWIAPILSFTADEVWQLLPGQRDAYVF 790



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 63/205 (30%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ +D    DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVDGQRADFIRLGVLGDWQKPYLTMDFATEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTATDSKALAAQF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVAMVIWTTTPWTLPANR 251


>gi|198274109|ref|ZP_03206641.1| hypothetical protein BACPLE_00246 [Bacteroides plebeius DSM 17135]
 gi|198273187|gb|EDY97456.1| hypothetical protein BACPLE_00246 [Bacteroides plebeius DSM 17135]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    V    N   +R+  D +  S+  D  +RT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAVTTAANIARYREQLDKIGFSFDWDREVRTCEPGYYHWTQWAFQKMFNSFY 147

Query: 119 IYKGCYSGWYSLRDEAYYND 138
                 +   S     +  +
Sbjct: 148 CNSCQKAQPISKLIAHFEAE 167



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 88/222 (39%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDVEAFKNWRPEYHNAEFILEDGKYICGWAVE---KMSKSMYNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E  G D LR + +      +   +D +G+           + NL           YD  
Sbjct: 733 VERYGADTLRMYEMFLGPVEQSKPWDTNGIDGVHR--FLKKLWNLF----------YDRQ 780

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                A  E+ +  L    ++++++  +++    + +++  +  V+E             
Sbjct: 781 GTFLPAEGEATKEELKAIHKLIKKVTGDIETFSYNTSISAFMICVNE------------- 827

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   +++      V+  L +LL  F P LA ++++ L 
Sbjct: 828 -------LTSLKCRNKAVMSNLVVLLAPFAPHLAEELWEALG 862


>gi|114048530|ref|YP_739080.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944450|sp|Q0HS82|SYI_SHESR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113889972|gb|ABI44023.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 940

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 126/406 (31%), Gaps = 48/406 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D Q    Q        QW+ + G      
Sbjct: 398 HHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNQNLRKQALSEIEQTQWIPDWGQSRIEK 457

Query: 171 AYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
             +++          + +P    + R  E +      L     +R     GI+   D   
Sbjct: 458 MVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMARVANRIE-QEGIQAWWDLDA 516

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                            + VW D+ + + +  G      G        DL++ G D    
Sbjct: 517 AELLGEEAEQYRKVTDTLDVWYDSGSTFASVVGARPEFHGHG-----VDLYLEGSDQHRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +  ++   P  + +     +  KG K+SKS+GNVI P +V  ++G D LR +
Sbjct: 572 WFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLW 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AF 383
           +           Y  +        + +      +  +   +L + +G  P          
Sbjct: 632 VAA-------TDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNGFDPAKDLVAVEDM 684

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTN 440
              D   +   + + QEI E  +    H    +++   S      Y D  K  +   K  
Sbjct: 685 VALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQE 744

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
                +       +   +   +   +   A++++ +L    +   F
Sbjct: 745 GHARRSCQSALFHIAEAMVRWIAPILSFTADEVWQLLPGQRDAYVF 790



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 63/205 (30%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ +D    DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVDGQRADFIRLGVLGDWQKPYLTMDFATEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTATDSKALAAQF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVAMVIWTTTPWTLPANR 251


>gi|193216447|ref|YP_001999689.1| fusion of oligopeptide transport protein OppF and Valyl-tRNA
            synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001770|gb|ACF06985.1| fusion of oligopeptide transport protein OppF and Valyl-tRNA
            synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 1631

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 136/349 (38%), Gaps = 42/349 (12%)

Query: 157  VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
            ++ +++  +F +++    +LL+ + S   F    +R   V+    +   D ++SR+   W
Sbjct: 1138 IEILKQPQWFVKMNTLAKRLLADFNSGKGFKFIPDRFGSVLEKWMNNAHDWTISRQ-IWW 1196

Query: 217  GIKIP--------------------DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
            G +IP                     DP  ++  W  +        G+  N    K +++
Sbjct: 1197 GHRIPAWYKGKKIKVQEKSPGEGWVQDPD-VLDTWFSSALAPFVFLGWPQNLTLMK-RYF 1254

Query: 257  PADLHVIGKDILRFH--AIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            P DL V   DI+ F    +Y+ +       P  +          +G KISKSL N IDPI
Sbjct: 1255 PTDLLVTSYDIIFFWVARMYFQSLEFLNTKPFKEVFIHGLLRDGQGRKISKSLRNGIDPI 1314

Query: 315  EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
            ++IEE GVD L+  L+  +  G+D  Y +D +K        N   N+     S+  + YD
Sbjct: 1315 KIIEEHGVDVLKMSLIFNVTAGQDMNYGEDKIKSA--KLFINKFWNIARLISSIRQESYD 1372

Query: 375  GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQK 432
                      E D  IL+       EI   +     +    +V   V       Y +  K
Sbjct: 1373 EF--DLSKLDEFDVWILNKFIVFRNEIDSAINKYEFNVIFKKVQDFVINDFASWYLEFLK 1430

Query: 433  PWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 K+N        Y    + +++ I L  F+    + +F+ ++  +
Sbjct: 1431 ----LKSNK-------YFIHFLFKEILITLHPFISFTTDYLFENIYREE 1468



 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHG---QKI 58
           + +    I         + HIGHA + +I D + R+ +L   DV++  G D  G   Q +
Sbjct: 819 QSKLPFTIILPPPNVTGKLHIGHALDELIPDTIIRYKKLHNFDVMWVPGKDHAGIATQAV 878

Query: 59  AKAAQNAGVTT--------------KVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
            +                         + D  S N       +   + YD    T +K  
Sbjct: 879 VERLLRENNMPDRHILGREAFLEEIWKWKDAYSDNITSQWQKMGLALDYDMERFTFDKDA 938

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
           ++    ++  +  KG IY    +  +  + +   ++ EV  
Sbjct: 939 NEAVTKVFIDMYQKGLIYYANKAINWDPKLQTALSNIEVIN 979


>gi|325914855|ref|ZP_08177190.1| Isoleucyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538946|gb|EGD10607.1| Isoleucyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 926

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 92/277 (33%), Gaps = 19/277 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+   +             +    PADL++ G D     F +       +    
Sbjct: 531 ILDVWFDSGVTHEAVLV-------DRGLPKPADLYLEGSDQHRGWFQSSLLSGVAMDKAA 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P  + +     +   G K+SKS GN I+P E+++ +G D LR ++       +     ++
Sbjct: 584 PYKQCLTHGFTVDEHGRKMSKSSGNGIEPQEIMKTLGADILRLWIASADYSNEMS-LSQE 642

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIR 402
            LK+  NAD    + N   R +   L  +D +            D  I+     + ++I 
Sbjct: 643 ILKR--NADAYRRLRNTA-RFLLGNLHGFDPLQHLVALDDMVLLDRWIVHRAHELQEKIV 699

Query: 403 ENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR-ASTVLYVTVEVIRQLA 459
                      +  +++   V     Y D  K          R   +       V     
Sbjct: 700 SAYARYDFAEIVQALLNFCSVDLGSLYLDVTKDRLYTMAENSRGRRSAQSAMYHVAEAFV 759

Query: 460 ILLQAFVPKLANKIFDILFVADE-NRCFQSLDQRLKP 495
             +   +   A +++  L      N  F +    L P
Sbjct: 760 RWVAPVLTFTAEELWGYLPGEHAGNVLFATWYDGLAP 796



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 15/156 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N Q H+GHA   I+ D++ +   L G D  +  G D HG  I  A 
Sbjct: 31  GRPLFVLHDGPPYANGQIHLGHAVNKILKDIIVKSKYLAGFDAPYIPGWDCHGLPIEIAI 90

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                   + +  +     R     L +   +D+  +T +        
Sbjct: 91  EKKYGKVGVKLDAAEFRQKCREYATEQIDLQRRDFKRLGVVGDWDNPYKTLDFHFEANEI 150

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               K+ D G + +G     +     +   + E+  
Sbjct: 151 RALAKVVDNGHLTRGVKPVHWCFDCGSALAEAEIEY 186


>gi|157150179|ref|YP_001449984.1| isoleucyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189082338|sp|A8AW24|SYI_STRGC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157074973|gb|ABV09656.1| isoleucyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +             +  ++  ++ +     P             D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDTVAYEELRSVDKYMTVR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|113971292|ref|YP_735085.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|122943610|sp|Q0HFY9|SYI_SHESM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113885976|gb|ABI40028.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 940

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 124/397 (31%), Gaps = 48/397 (12%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D Q    Q        QW+ + G      
Sbjct: 398 HHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNQNLRKQALSEIEQTQWIPDWGQSRIEK 457

Query: 171 AYQDKLLSYYESHPEFILP----IERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ- 225
             +++          + +P    + R  E +      L     +R     GI+   D   
Sbjct: 458 MVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMARVANRIE-QEGIQAWWDLDA 516

Query: 226 ---------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL-- 268
                            + VW D+ + + +  G      G        DL++ G D    
Sbjct: 517 AELLGEEAEQYRKVTDTLDVWYDSGSTFASVVGARPEFHGHG-----VDLYLEGSDQHRG 571

Query: 269 RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYF 328
            F +    +  ++   P  + +     +  KG K+SKS+GNVI P +V  ++G D LR +
Sbjct: 572 WFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLW 631

Query: 329 LVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AF 383
           +           Y  +        + +      +  +   +L + +G  P          
Sbjct: 632 VAA-------TDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNGFDPAKDLVAVEDM 684

Query: 384 TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWEL-KKTN 440
              D   +   + + QEI E  +    H    +++   S      Y D  K  +   K  
Sbjct: 685 VALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIKDRQYTAKQE 744

Query: 441 PDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +       +   +   +   +   A++++ +L
Sbjct: 745 GHARRSCQSALFHIAEAMVRWIAPILSFTADEVWQLL 781



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 63/205 (30%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R    +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTT--KVFVDQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R   A+ +D    DFIR            T +        
Sbjct: 107 EQKVGKPGQKISAAEFREECRKYAAEQVDGQRADFIRLGVLGDWQKPYLTMDFATEANIV 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                   +     F
Sbjct: 167 RSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTATDSKAVAAQF 226

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            +S Y   +     +   + LP  R
Sbjct: 227 GVSDYSHPVAMVIWTTTPWTLPANR 251


>gi|298483218|ref|ZP_07001397.1| leucine--tRNA ligase [Bacteroides sp. D22]
 gi|298270535|gb|EFI12117.1| leucine--tRNA ligase [Bacteroides sp. D22]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   + +++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWVFQKMFNSYYC 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|237756707|ref|ZP_04585209.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691131|gb|EEP60237.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 621

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 122/346 (35%), Gaps = 13/346 (3%)

Query: 136 YNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNE 195
           Y  + +    + +          W      F+  +  +         H   ++  +    
Sbjct: 122 YGQNRIKSMVENRPDWCISRQRSWGVPITVFYCENCGEIVKDMEVFEHVANLIKNDEFGA 181

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
            I F KS  + L    K    G +     + I+ VW D+  ++     Y +     +   
Sbjct: 182 DIWFEKSAKELLPEGYKCKKCGGQEFKKEEDILDVWFDSGVSHAAVLKYGEW----EELR 237

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
           WPAD+++ G D     F +    +       P    +     +  KG K+SKS GNV+ P
Sbjct: 238 WPADMYLEGSDQHRGWFQSSLLESVASYNRAPYDTVLTHGFTLDEKGRKMSKSAGNVVAP 297

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-D 372
            +VI+E G D LR ++V E    +D     + +K+   A+    I N     +  +   +
Sbjct: 298 EKVIKEYGADILRLWVVTEDY-TEDIKIGFNLIKRI--AEDYRKIRNTFRYFLGNLYDFN 354

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDA 430
            +          E D  +LS    ++Q   ++ +    H+    + +   V     Y D 
Sbjct: 355 PNQDYVPYENLLEIDRWMLSKLQNIIQIADKSYEEGKFHKIYHTIKNFVIVDLSAIYLDI 414

Query: 431 QKPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
            K    +         +   V  E++  L  +L   +   A +++ 
Sbjct: 415 LKDRLYVYAPKSLERRSAQTVLWELLLSLNKILAPIISFTAEEVWQ 460


>gi|22299873|ref|NP_683120.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22296058|dbj|BAC09882.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 981

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 94/266 (35%), Gaps = 31/266 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ +++    G              ADL++ G D     F +       +    P
Sbjct: 568 MDVWFDSGSSWAAVLGDQQ-----------ADLYLEGSDQHRGWFQSSLLTRVAVKGQAP 616

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREIACG 336
               +     +  +G K+SKSLGNV DP EV             G D LR ++   +   
Sbjct: 617 YKAVLTHGFVLDEQGRKMSKSLGNVTDPREVIEGGKNQKQDPPYGADVLRLWV-SSVDYA 675

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVC 394
            D    K+ L  R  AD+   I N   R +   L D++    +         D  +L   
Sbjct: 676 NDVPIGKNIL--RQLADVYRKIRNTA-RFLLGNLHDFEPEQDMIPYAQLPALDRYMLHRL 732

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTN-PDRASTVLYVT 451
             V  E+     +   +R    + +L  V   + Y D  K          DR  +   V 
Sbjct: 733 HEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDRLYISAATGDRRRSCQTVL 792

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              ++ LA  +   +P LA  I+  L
Sbjct: 793 AIALQNLARAIAPVLPHLAEDIWQHL 818



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +     Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I        
Sbjct: 82  FILHDGPPYANGALHIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNL 141

Query: 67  VTT--------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
                            K F  +     +       +   +     T    +      ++
Sbjct: 142 KPEQRAQLTPLTLRQQAKEFALKTVAEQKQSFQRYGVWGDWAHPYLTLTPDYEAAQIGVF 201

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  +G IY+G     +S   +    + E+  
Sbjct: 202 GEMVLRGYIYRGLKPVHWSPSSKTALAEAELEY 234


>gi|52220888|ref|YP_086757.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|222112707|ref|YP_002559294.1| Agrocin 84-resistant leucyl-tRNA synthetase [Agrobacterium
           radiobacter K84]
 gi|41393770|gb|AAS02118.1| probable leucyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|221728484|gb|ACM31456.1| Agrocin 84-resistant leucyl-tRNA synthetase [Agrobacterium
           radiobacter K84]
          Length = 814

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 118/365 (32%), Gaps = 43/365 (11%)

Query: 142 YKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVK 201
                 Q Y     P+    E G           LL  +        P+ R         
Sbjct: 414 NWSISRQRYWGCPIPIIHCSECGTIPVAEEQLPILLPDHLISEGSGSPLSRD-------- 465

Query: 202 SGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTN---YLTTTGYLDNPDGSKAKFWPA 258
               +  +  K    G     DP   M  ++D+      Y + +           K  PA
Sbjct: 466 ----ESWMKAKCPQCGGDAARDPD-TMDTFVDSSWYFLRYPSPSSPNPIDSSLCNKIAPA 520

Query: 259 DLHVIGKDILRFHAIYWPAF--------LLSANLPLPKKVFSHGFILHKGEKISKSLGNV 310
           D+++ G +    H IY             +  + P  +           G K SKSLGNV
Sbjct: 521 DVYIGGIEHATLHLIYSRFITKVLHDLGYIEFDEPFVELYNQGMVNDVHGRKQSKSLGNV 580

Query: 311 IDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMIL 370
            DP  V++E G DA+R +L+ +         + +    +        +  L + ++  + 
Sbjct: 581 TDPSVVVQEFGADAVRCYLLFKTTYN--APINWEDSGPQAMRSYLERVCRLFTNNLDRLR 638

Query: 371 KDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDA 430
                 I       E D  I       + ++  +++    + A+A ++S+ + +      
Sbjct: 639 SSSAIEICPDDCENEEDREIARQLQLAIGKVTADVERFHFNAAIAAIMSVTNLL------ 692

Query: 431 QKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD--ENRCFQS 488
                 +K           V    +R L  LL  F P ++ +++ +           + +
Sbjct: 693 -----YEKGG----KASPTVLAGSLRLLVRLLAPFAPHISEELWALSGCNSLVAAEPWPT 743

Query: 489 LDQRL 493
           +++RL
Sbjct: 744 INERL 748



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 69/201 (34%), Gaps = 6/201 (2%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           +K Y+     Y +   HIGH     + D LAR     G  VL   G D  G     AA+ 
Sbjct: 31  KKFYVLEMFPYTSGHLHIGHVRNYSMGDTLARMQIARGYSVLHPMGWDSFGLPAENAARK 90

Query: 65  AGVTTKVFVDQNSRNFRD--MADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
            G     F      + +   M      S+ + + T    +    + L+  +  KG IY+ 
Sbjct: 91  FGTHPAKFTQDAIDSMKRSMMQLGFGYSWANELATCSPTYVLAQQKLFLDLYRKGLIYRD 150

Query: 123 CYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYES 182
               ++   ++     ++V  G   +   A    V       +F  + +Y D+LL   ES
Sbjct: 151 DTYVYWDPVEQTVLAAEQVIDGKGWRSGAA----VYKRRTPQWFVDIRSYADRLLDDLES 206

Query: 183 HPEFILPIERRNEVISFVKSG 203
              +   +            G
Sbjct: 207 LEGWPTSVRNIQRNWIGRTEG 227


>gi|293977748|ref|YP_003543178.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667679|gb|ADE35314.1| valyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 870

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 129/349 (36%), Gaps = 19/349 (5%)

Query: 164 GYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
            + + +  +      ++               V   ++  LK+  +         K    
Sbjct: 391 HWLYNIHDWNISRQLWWGHRLPVYYYNNEDFVVSETIEGALKEARIKSDNNFLSYKDLRQ 450

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PADLHVIGKDILRFH--AIYWPAFLL 280
              ++  W  +    ++    +  P+ ++ K++ P    V   DIL F    +    + L
Sbjct: 451 ENDVLDTWFSSWLWPISVFDGIRFPNNNEIKYYYPTQNLVTAPDILFFWVTRMIMSGYYL 510

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
               P  K  F+      K  K+SKSLGN  +PI++I++ G DA+R  ++     G D  
Sbjct: 511 MGTPPFKKIYFTGVVKDKKNIKMSKSLGNSPNPIDLIDQYGADAVRVGILLSANAGNDLI 570

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +D++   K    +LAN I N  +  +   LK  + +     A   + +   +  ++ L +
Sbjct: 571 FDENICLK--GRNLANKIWN--AFILINTLKSVNFLKANIYA-ELAIKWFDNKINKFLSK 625

Query: 401 IRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQ 457
           I  +++      +   +  L        Y +      L K+N       ++  T+   ++
Sbjct: 626 IEFSIKKYRFSESFMMIYKLFFNDFCSLYLE------LIKSNSKILNKKIINKTIFFFKK 679

Query: 458 LAILLQAFVPKLANKIFDIL--FVADENRCFQSLDQRLKPGFMLHKTFD 504
           +  L   ++P +  KI+  L     + +    +  ++      L K F 
Sbjct: 680 IIKLFHPYMPFITEKIWQNLKSKTNENDLIITNFPKKYLFNNKLIKKFK 728



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R+   I           H+GH     I D+L R+ R+ G +  +  GTD          
Sbjct: 32  KRKPYTIIMPPPNITGILHMGHILNNTIQDILIRYARMKGYNACWIPGTDHASIATEAKI 91

Query: 63  -----QNAGVTTKVFVDQNSRNFRDM-------------ADVLDISYDDFIRTTEKRHHD 104
                +      K+ + +  +                         ++    T +   ++
Sbjct: 92  VSYLKKKCLSKEKIGIQEFLKIACKWKNKYEKIIINQIKKIGCSCDWNRKKFTMDSIMNE 151

Query: 105 TCRILWKKISDKGDIYK-GCYSGWYSLRDEAYYNDDEVYKGADG 147
           +   ++ K+  +G IY+      W         N++ +YK  +G
Sbjct: 152 SVTKIFVKLYKEGKIYRDYSIVNWDPYAKTTVSNEEIIYKKYNG 195


>gi|161869382|ref|YP_001598549.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082328|sp|A9M1J7|SYI_NEIM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161594935|gb|ABX72595.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 107/296 (36%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +  +       H A+ +++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELVKKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|116250663|ref|YP_766501.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255311|emb|CAK06386.1| putative isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 982

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPADL++ G D     FH+    + 
Sbjct: 579 WTQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFHSSLLESA 632

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++       D
Sbjct: 633 ATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYA-DD 691

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    I       E ++ +L   + + 
Sbjct: 692 LRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEEI-ALADLPELEQLMLHRLAELD 748

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +REN       +    +I   + E+   YFD +K   L    P   R    L+V  ++
Sbjct: 749 ELVRENYDTFDFKKIARALIDFANVELSAFYFDIRKD-ALYCDAPSSLRRRASLHVIRQI 807

Query: 455 IRQLAILLQAFVPKLANKIF 474
              +   L   +P    + +
Sbjct: 808 FDCMVTWLAPMLPFTTEEAW 827



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKI 112

Query: 63  QNA----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHD 104
           +                      + F     +   +    L I   +D+   T       
Sbjct: 113 EEKYREKGKNKDEVPVNEFRRECREFAAGWIKVQAEEFKRLGIEGDFDNPYTTMNFHAES 172

Query: 105 TCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                  KI+  G +Y+G     +S+ +     + EV              PV
Sbjct: 173 RIAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEVEYQDYESDTIWVKFPV 225


>gi|84029572|sp|Q8DGI7|SYI_THEEB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 953

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 94/266 (35%), Gaps = 31/266 (11%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ +++    G              ADL++ G D     F +       +    P
Sbjct: 540 MDVWFDSGSSWAAVLGDQQ-----------ADLYLEGSDQHRGWFQSSLLTRVAVKGQAP 588

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREIACG 336
               +     +  +G K+SKSLGNV DP EV             G D LR ++   +   
Sbjct: 589 YKAVLTHGFVLDEQGRKMSKSLGNVTDPREVIEGGKNQKQDPPYGADVLRLWV-SSVDYA 647

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVC 394
            D    K+ L  R  AD+   I N   R +   L D++    +         D  +L   
Sbjct: 648 NDVPIGKNIL--RQLADVYRKIRNTA-RFLLGNLHDFEPEQDMIPYAQLPALDRYMLHRL 704

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTN-PDRASTVLYVT 451
             V  E+     +   +R    + +L  V   + Y D  K          DR  +   V 
Sbjct: 705 HEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDRLYISAATGDRRRSCQTVL 764

Query: 452 VEVIRQLAILLQAFVPKLANKIFDIL 477
              ++ LA  +   +P LA  I+  L
Sbjct: 765 AIALQNLARAIAPVLPHLAEDIWQHL 790



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 16/153 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +     Y N   HIGHA   I+ D++ ++  L G  V +  G D HG  I        
Sbjct: 54  FILHDGPPYANGALHIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNL 113

Query: 67  VTT--------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILW 110
                            K F  +     +       +   +     T    +      ++
Sbjct: 114 KPEQRAQLTPLTLRQQAKEFALKTVAEQKQSFQRYGVWGDWAHPYLTLTPDYEAAQIGVF 173

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  +G IY+G     +S   +    + E+  
Sbjct: 174 GEMVLRGYIYRGLKPVHWSPSSKTALAEAELEY 206


>gi|322388914|ref|ZP_08062506.1| isoleucine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140297|gb|EFX35810.1| isoleucine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFTESDESILSV 393
                D L +             +  ++  ++ +     P             D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDSVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++K  IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKCYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|317129281|ref|YP_004095563.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474229|gb|ADU30832.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 920

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 74/468 (15%), Positives = 163/468 (34%), Gaps = 41/468 (8%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISY-------DDF 94
           GLDV      D+ G    +A    G+         +   +++  +L +S+       D  
Sbjct: 342 GLDV--LCPVDDKGVMTEEAPMFEGLFYDEANKPITEKLKEVGALLHLSFMTHSYPHDW- 398

Query: 95  IRTTEKRHHDTCRILW---KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
            RT +   +      +   K   +         +      +   YN              
Sbjct: 399 -RTKKPVMYRATAQWFASIKDFREDLLKEINEVNWVPHWGETRLYNMVRDRGDWCISRQR 457

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
           A   P+     E     ++    + +S         +  E     +      L +   S 
Sbjct: 458 AWGVPIPVFYGENNEPIITDETIEHVSNLFRKHGSNIWFEWDTIDL------LPEGFKSE 511

Query: 212 KTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
            + +       D   IM VW D+ +++ +                PAD+++ G D     
Sbjct: 512 HSPNGTFTKETD---IMDVWFDSGSSHQSVLEERAELQR------PADMYLEGSDQYRGW 562

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F++    A  ++   P    +     +  +G K+SKS+GNV+ P +V++++G D LR ++
Sbjct: 563 FNSSLSTAVAVTGKAPYKTVLSHGFTLDGEGRKMSKSVGNVVVPDKVMKQLGADILRLWV 622

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDE 388
              +    D     + LK+   A++   I N     +  I   + +         +E D+
Sbjct: 623 -SSVDYQADVRVSDNILKQV--AEVYRKIRNTFRFMLGNIHDFNPETDKVNFEDMSELDQ 679

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK--KTNPDRA 444
            ++   +++++++R + +         +V +   +     Y D  K        ++PDR 
Sbjct: 680 YMIVKLNQLVKDVRNSYEEFQFGSVYNKVHNFCTIELSSFYMDLAKDTLYIQHASHPDRR 739

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDIL-FVADENRCFQSLDQ 491
             +  V  E +  L  L+   +    ++++  +  V  E+     + +
Sbjct: 740 G-IQTVMYETLVALTKLMSPILSHTTDEVWKHIPGVTTESVQLTDIPE 786



 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   H+GHA   I+ D + R+  + G    +  G D HG  I  A
Sbjct: 46  EGRPLFILHDGPPYANGDIHMGHALNKILKDFIVRYKSMTGFHAPYVPGWDTHGLPIETA 105

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTC 106
                                + +  +   N R+    L +  D      T +  +    
Sbjct: 106 LTKKGKVDRKKLTIAEFREKCEEYALKQIDNQREQFKRLGVRGDWENPYVTLDHGYEAQQ 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++ +++ KG IYKG    ++S   E+   + E+     
Sbjct: 166 IKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYHDK 205


>gi|91794074|ref|YP_563725.1| isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716076|gb|ABE56002.1| Isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 943

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 117/365 (32%), Gaps = 40/365 (10%)

Query: 158 QWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWG 217
            W +        +     +           L + R  E +      L +    R     G
Sbjct: 452 DWGQSRIEKMVENRPDWCISRQRTWGVPITLFVNRETEELHPDSVALMERVAHRIEQQ-G 510

Query: 218 IKIPDDPQY----------------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLH 261
           I+   D                    + VW D+ +++ T         G +      DL+
Sbjct: 511 IQAWWDLDDAELLGDEAPLYRKVTDTLDVWYDSGSSFSTVVASRPEFHGHE-----VDLY 565

Query: 262 VIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEE 319
           + G D     F +    +  ++   P  + +     +  KG K+SKS+GNVI P+ V  +
Sbjct: 566 LEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSVGNVIAPLHVTNK 625

Query: 320 VGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT 379
           +G D LR ++      G+    D+  +  R            +  +   +L + +G  P 
Sbjct: 626 LGADILRLWVAATDYSGEMTVSDE--ILNRS-----ADAYRRIRNTARFLLANLNGFNPE 678

Query: 380 PG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQK 432
                       D  ++   + + QEI E+      H    +++   S      Y D  K
Sbjct: 679 TDMVASEDMVALDRWVVRRAAALQQEIIESYDQYNFHNVTQKLMQFCSVELGSFYLDIIK 738

Query: 433 PWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF-QSLD 490
             +   K       +       +   +   +   +   A++++ +L    +   F Q   
Sbjct: 739 DRQYTAKQEGHARRSCQSALFHIAEAMVRWMTPILSFTADEVWQLLPGKRDKYVFTQEWY 798

Query: 491 QRLKP 495
           Q L+ 
Sbjct: 799 QGLEA 803



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 63/205 (30%), Gaps = 15/205 (7%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R+   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 50  GRKPFILHDGPPYANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKV 109

Query: 63  QNAGVTT--KVFVDQNSRNFRDMAD-VLDISYDDFIR------------TTEKRHHDTCR 107
           +        K+   +     R  A   +D   DDFIR            T +        
Sbjct: 110 EQKVGKPGIKISAAEFREECRKYAATQVDGQRDDFIRLGVLGDWNNPYLTMDFSTEANIV 169

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
               K+ + G ++KG     +     +   + EV                         F
Sbjct: 170 RSLAKVIESGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFSAVDSAAVAAKF 229

Query: 168 RLSAYQDKLLSYYESHPEFILPIER 192
            ++ Y   +     +   + +P  R
Sbjct: 230 GVANYASTVSMVIWTTTPWTMPANR 254


>gi|223043792|ref|ZP_03613835.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442889|gb|EEE48991.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 916

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I     +          + D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDYNPETDRIPENELLDVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LVDMTKLLAPILVHTAEEVWSH 770



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNQSYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +D+   T    +     
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|83859968|ref|ZP_00953488.1| valyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852327|gb|EAP90181.1| valyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 867

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 130/385 (33%), Gaps = 65/385 (16%)

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
           P++ +    +F R   +++++L           P   R    S+V+    D S+SR+   
Sbjct: 369 PLEIIVTPQWFIRTLDFKEQILEK--GREITWRPAYMRQRFESWVEGLKWDWSISRQRH- 425

Query: 216 WGIKIP--------------------------------------DDPQYIMYVWIDALTN 237
           +G+ +P                                      +  + +M  W  +  +
Sbjct: 426 FGVPLPVWYSKRLGEEGQIIVPSKDQLPVDPTTDLPQGYEAHEVEGERDVMDTWATSSVS 485

Query: 238 YLTTTGYLDNPDGSK----AKFWPADLHVIGKDILRFHAIYWP--AFLLSANLPLPKKVF 291
               T  ++           + +P  L     +I+R  A Y    A      +P      
Sbjct: 486 PQLNTRSINEDYALDIESHRRQFPMALRPQAHEIIRTWAFYTIVKALHHENTVPWSNIAI 545

Query: 292 SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVN 351
           S   +   G K+SKS GNVIDPI++++E G D +RY+       G+D     + LK+   
Sbjct: 546 SGWCLASDGSKMSKSKGNVIDPIKMLDEYGTDPVRYWTGTSR-LGQDTALSPNTLKQ--G 602

Query: 352 ADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----------TESDESILSVCSRVLQEI 401
             L   + N    +   +       +  P                D+ +L   S+ + + 
Sbjct: 603 KRLVTKLWNAAKLAAMSLEGAQSHGVLNPTTPKGDIESGVISHPLDQWLLGELSQTIAKA 662

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP--DRASTVLYVTVEVIRQ 457
            +  +N     A  +V         D Y +  K     +  P  +  S V +        
Sbjct: 663 TKAFENYEYAAAQREVEDFFWRTYCDNYLEIVKRRTRFEGKPEGEELSAV-HTLWHATDA 721

Query: 458 LAILLQAFVPKLANKIFDILFVADE 482
           L  L   F+P + + ++D++    E
Sbjct: 722 LIRLFAPFIPYVTDALYDVMIGDRE 746



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 15/150 (10%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK------ 60
             I T     +   H+GH Y    AD++AR+ R+ G +VL+  G D++G    +      
Sbjct: 39  YVIDTPPPTVSGALHVGHVYSYTQADIMARYMRMSGRNVLYPIGWDDNGLPTERLVEKVK 98

Query: 61  -------AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWK 111
                  + +      K  +    + FRD+   L +S D     +T         ++ + 
Sbjct: 99  KVRGGTMSREEFVALCKEVIPPYEQQFRDLFGRLALSVDWSREYQTISDESRSVSQMSFL 158

Query: 112 KISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
            +  KG + +      +   D       EV
Sbjct: 159 DLYHKGLLERRLEPTLWDPADRTAIAQAEV 188


>gi|209694172|ref|YP_002262100.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254782358|sp|B6EMY6|SYI_ALISL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|208008123|emb|CAQ78265.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 952

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 118/357 (33%), Gaps = 30/357 (8%)

Query: 157 VQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF 214
           V+WM E G        + +          + +PI      E        L+ +    K  
Sbjct: 449 VEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETSELHPDSLELIEKVAKLV 508

Query: 215 D-WGIKIPDDPQ-----------------YIMYVWIDALTNYLTTTG-YLDNPDGSKAKF 255
           +  GI+   D                     + VW D+   + +      +     + + 
Sbjct: 509 EEKGIQAWWDLDIAELMGEDDATKYEKVLDTLDVWFDSGVTHFSVVDSREEYNFPQEERT 568

Query: 256 WPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             ADL++ G D     F +    +  +    P  + +     +   G K+SKS+GNV+ P
Sbjct: 569 HSADLYLEGSDQHRGWFQSSLISSVAMKGKAPYRQVLTHGFVVDGNGRKMSKSVGNVVAP 628

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-D 372
            +V  ++G D LR ++       +    D+     + +AD    I N     ++ +   +
Sbjct: 629 KDVTNKLGADILRLWVASTDYTNEVAVSDE---ILKRSADAYRRIRNTARFFLANLNGFN 685

Query: 373 YDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDA 430
            +  I         D   +       +EI ++     +H    +++   S      Y D 
Sbjct: 686 PETDIVPAEEMVALDRWAVGRAFAAQEEIIKSYDEYNLHEVTQRLMHFCSIEMGSFYLDV 745

Query: 431 QKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
            K  +   K +     +       ++  L   +   +   A++I++ +    +   F
Sbjct: 746 IKDRQYTAKKSGHAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGKRDKFVF 802



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFILHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L I   +D   RT +       
Sbjct: 106 VEKKKGKPGQKISAAEFREECRKYAAVQVEGQKESFKRLGIMGEWDKPYRTMDFGTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+D+G + KG     +     +   + EV  
Sbjct: 166 IRSLGKIADQGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|323144575|ref|ZP_08079164.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415651|gb|EFY06396.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 939

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 126/377 (33%), Gaps = 39/377 (10%)

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDK------LLSYYESHPEFILPIERRNEVISFVK 201
              +   N ++ M  +   + +S  +        L++          P        +  K
Sbjct: 445 WIPSWGQNRIEAMVSQRTDWCISRQRTWGMPCAILINKETGEIHPRTPEIIEKVAKAVEK 504

Query: 202 SGLKDLSLSRKTFDWGIK---IPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPA 258
            G++     +     G +   +       + VW D+ +       +       + K   A
Sbjct: 505 EGIQAWWDLKVEDLIGPEEASLYYKDPNTLDVWFDSGST-----QFSVVDQRPEFKGHTA 559

Query: 259 DLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
           D+++ G D     F +    +  +    P  + +     +   G K+SKSLGNVI P  V
Sbjct: 560 DMYLEGSDQHRGWFMSSLMLSVAMKDKAPYRQVLTHGFTVDGNGRKMSKSLGNVIAPQSV 619

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++++G D LR ++      G+      +  K+  ++         V  ++  +L +  G 
Sbjct: 620 MDKLGADVLRLWVASTDYTGE-IAVSDEIFKRSSDS------YRRVRNTIRFLLANLSGF 672

Query: 377 IPTPGAFT-----ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFD 429
            P           E D+  +S  ++V +EIR    N   H  +  ++   S      Y D
Sbjct: 673 DPQKDLVEFDKMIELDKWAVSQAAKVQKEIRAYYDNYDFHMVVQNLMHFCSIELGSFYLD 732

Query: 430 AQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--------FVA 480
             K  +   K +     +       +   L   +   +   A + ++ +        F A
Sbjct: 733 IIKDRQYTAKADSLARRSCQSALYLIAEALIRWIAPVLSFTAQEAWEAMPGKRDEFVFTA 792

Query: 481 DENRCFQSLDQRLKPGF 497
                 + LD   K G 
Sbjct: 793 TWFDGLKELDDNAKFGH 809



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 66/224 (29%), Gaps = 15/224 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R+   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  EGRDMFILHDGPPYANGSIHIGHSINKILKDIIVKSKTMSGFDSPYIPGWDCHGLPIELK 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D    T + +     
Sbjct: 106 VEGLVGKPGDKVDAATFRKECRKYAYKQIEGQKKDFKRLGVLGDWDHPYITMDYKTEADT 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
                K+ + G   +G    ++ L  ++   + EV                         
Sbjct: 166 IRALGKVIENGHFVRGSKPVYWCLDCQSALAEAEVEYYDVTSDAIDVRFKAVDESAVLKV 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLS 210
           F     +  +     +   + LP  R   +    +  L  ++ +
Sbjct: 226 FNTDKGEGPISCVIWTTTPWTLPANRAICLNEAFEYALVQINGT 269


>gi|282877273|ref|ZP_06286105.1| leucine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300614|gb|EFA92951.1| leucine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 950

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +++K Y+     YP+    H+GH    I +D+ AR+ R +G +VL   G D +G    + 
Sbjct: 29  QKKKYYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRQNGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G    +  ++N +++R+  D +  S+  D  IRT +  ++   +  + K+     
Sbjct: 89  AIQTGQHPSITTEENIKHYREQLDKIGFSFDWDREIRTCDPAYYKWTQWAFIKMFQSYY 147



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 84/217 (38%), Gaps = 38/217 (17%)

Query: 266 DILRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
           DI  F A  W      A   L    +   + +    K+SKS+ NV++P  ++E+ G D L
Sbjct: 691 DIEAFKA--WRPEYKQAEFILEGDKYVCSWAIE---KMSKSMYNVVNPDMIVEQYGADTL 745

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD-YDGMIPTPGAFT 384
           R + +          +D +G+         +G    + +   ++ +   D  +P     T
Sbjct: 746 RLYEMFLGPVEASKPWDTNGI---------DGCHRFLKKLWGLVYEYRTDQFLPNDDEPT 796

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRA 444
              +  L    ++++++  +++    + A++  +  ++E                     
Sbjct: 797 ---KEQLKSVHKLIKKVTGDIEQFSYNTAISAFMICINE--------------------L 833

Query: 445 STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
           +       E+++ +  LL  F P ++ +++ +L   D
Sbjct: 834 AQSKCTNKELLKDVIKLLSPFAPHISEELWHVLGGED 870


>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 146/455 (32%), Gaps = 31/455 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F+     ++   +  D  G   A+A    G+         +    D   +L +SY  F+ 
Sbjct: 334 FYYSRKYNLDVLSPVDNQGHYTAEAPGFEGMFYAKANKVITDMLADNGSLLKLSY--FVH 391

Query: 97  T--TEKRHHDTCRILWK-KISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNA 152
           +   + R           +     D ++           + Y+   +V          + 
Sbjct: 392 SYPHDWRTKKPVIFRATPQWFASIDTFRQDILDVIENDVKWYHPSGQVRIYNMVRDRGDW 451

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  +        F     +  +      H   ++     +         L     +  
Sbjct: 452 VISRQRVWGVPLPVFYGENGEPIITPETIEHVAKLVGEFGSDVWFEREAKDLLPEGFTHP 511

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
           +   G         IM VW D+ +++                 +PADL++ G D     F
Sbjct: 512 SSPNGT--FTKEMDIMDVWFDSGSSHAGVLSVRP------ELTFPADLYLEGSDQYRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    +  +    P    +     +  +G+K+SKSLGNVI P + ++  G D +R ++ 
Sbjct: 564 NSSLTTSVAVHKQAPYKAVLSQGFVMDGEGKKMSKSLGNVISPAKEMQTKGADIIRLWV- 622

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     + L +   A         +  ++  +L +     P+  A        
Sbjct: 623 SSVDYESDVRISTEILNQISEA------YRKIRNTMRFMLANTTDFEPSKHAVAFKDLRS 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDR 443
            D+ ++   + V++ I E  +N         V++   V     Y D  K     +   + 
Sbjct: 677 VDQYMMIRFNDVVKTIEEAYENYEFSTIYQTVMNFCTVDLSQFYLDFAKDVVYIEHEDNY 736

Query: 444 ASTVLYVTVE-VIRQLAILLQAFVPKLANKIFDIL 477
               +   +  ++ +L  LL   +   + +++  L
Sbjct: 737 QRRAMQTVIYDILVKLTKLLSPILVHTSEEVWKYL 771



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R   + G    +  G D HG  I +A
Sbjct: 45  EGKPSFVLHDGPPYANGALHMGHALNKISKDFIVRSKSMSGFRAPYVPGWDTHGLPIEQA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
             NA                   +  +   N R     L +  ++D+   T +       
Sbjct: 105 LANAEGVDRKKLSIAEFRKLCAEYALRQVDNQRAEFKRLGVTGTWDNPYLTLQPEFEAEQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ K+++ G IYKG    ++S   E+   + E+  
Sbjct: 165 IRVFGKMAENGYIYKGLKPIYWSPSSESSLAEAEIEY 201


>gi|24668543|ref|NP_730716.1| Isoleucyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|24668547|ref|NP_524840.2| Isoleucyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|28574730|ref|NP_788565.1| Isoleucyl-tRNA synthetase, isoform D [Drosophila melanogaster]
 gi|21428494|gb|AAM49907.1| LD27166p [Drosophila melanogaster]
 gi|23094309|gb|AAF51822.2| Isoleucyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|23094310|gb|AAF51823.2| Isoleucyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|28380627|gb|AAO41285.1| Isoleucyl-tRNA synthetase, isoform D [Drosophila melanogaster]
 gi|220960122|gb|ACL92597.1| Aats-ile-PA [synthetic construct]
          Length = 1229

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 99/281 (35%), Gaps = 17/281 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       +    +      +PAD    G D     F+ +   +  L    
Sbjct: 533 VFDCWFESGSMPFAQQHFPFENEKDFMNNFPADFIAEGIDQTRGWFYTLLVISTALFNKA 592

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + S   +   G+K+SK   N  DP+EV+ + G DALR +L+       +    K+
Sbjct: 593 PFKNLIASGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINSPVVRAESLRFKE 652

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILK--------------DYDGMIPTPGAFTESDESI 390
              + +  D+     N     +  I++              D +  +      +  D  I
Sbjct: 653 EGVRDIIKDVFLPWYNAYRFLLQNIVRYEKEDLAGNGQYTYDRERHLKNMDKASVIDVWI 712

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +L+     M+   ++  + ++   + ++ + Y    +     +   D+    L 
Sbjct: 713 LSFKESLLEFFATEMKMYRLYTVVPRLTKFIDQLTNWYVRLNRRRIKGELGADQCIQSLD 772

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              +V+  +  ++  F P L   IF  L +       +  D
Sbjct: 773 TLYDVLYTMVKMMAPFTPYLTEYIFQRLVLFQPAGTLEHAD 813



 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 74/233 (31%), Gaps = 23/233 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 44  KGKPKYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAYQQGYHVDRRFGWDCHGLPVEFE 103

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRH 102
                        A +    +  +  +     AD  +         I + +  +T    +
Sbjct: 104 IDKLLNIKGPEDVAKMGIAAYNAECRKIVMRYADEWENVVTRVGRWIDFKNDYKTLYPWY 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ DKG +Y+G     YS       ++ E  +             ++ +  
Sbjct: 164 MESIWWIFKQLFDKGLVYQGVKVMPYSTACTTSLSNFEANQNYKEVVDPCVVVALEAVSL 223

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTF 214
              FF +            S+    + P     +V       L  L+ SR ++
Sbjct: 224 PNTFFLV---WTTTPWTLPSNFACCVHPTMTYVKVRDVKSDRLFVLAESRLSY 273


>gi|293397732|ref|ZP_06641938.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611678|gb|EFF40747.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +          H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|237722036|ref|ZP_04552517.1| leucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229448905|gb|EEO54696.1| leucyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|59800532|ref|YP_207244.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|240122757|ref|ZP_04735713.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268681358|ref|ZP_06148220.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|81311263|sp|Q5FAF5|SYI_NEIG1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59717427|gb|AAW88832.1| putative isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|268621642|gb|EEZ54042.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +          H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|300214721|gb|ADJ79137.1| Isoleucyl-tRNA synthetase(Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 931

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 136/421 (32%), Gaps = 31/421 (7%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + M       +D   RT +          +  +    D   G  +      D   +    
Sbjct: 388 KQMDYEHSYPFDW--RTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFPD---WGQKR 442

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +Y     +          W      F+             E   + +             
Sbjct: 443 LYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEAIMTKETIEHVAKLVEEHGSNIWFQREA 502

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K  L +   S  + +       D   IM VW D+ +++                 +PADL
Sbjct: 503 KDLLPEGFTSEHSPNGKFTKETD---IMDVWFDSGSSHQGVCAER------DYLTYPADL 553

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++ G D     F++    +   S + P  + +     +  KG K+SKSLGN I P EVI+
Sbjct: 554 YLEGSDQYRGWFNSSLITSVAYSGHAPYKQILSQGFTLDGKGRKMSKSLGNTIVPSEVID 613

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           ++G + +R +++       D        ++   +            +V  +L +     P
Sbjct: 614 KMGAEIIRLWVLSVDTSA-DVRVSMGSFQQIAES------YRKFRNTVRFLLANTTDFDP 666

Query: 379 TPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
              A         D+ +  + ++  +EI +   N        ++I+ +       Y D  
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 432 KPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K     +  +  +  ++  V  +V+ +L  L+   +P    +I+  L   ++      + 
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYLKEDEKYAQLSEMP 786

Query: 491 Q 491
           +
Sbjct: 787 E 787



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R   + G    +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AGV  K             +  +     R     L +   +D+   T +  +     
Sbjct: 105 LKKAGVDRKALSVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K+++KG IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGKMAEKGLIYKGKKPVFWSWSSESALAEAEVEYH 201


>gi|302525518|ref|ZP_07277860.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434413|gb|EFL06229.1| valyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 833

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 91/252 (36%), Gaps = 12/252 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYW--PAFLLSANL 284
           +M  W  +         +  + D    + +P  L     +I+R         A L    L
Sbjct: 496 VMDTWATSSLTPQIAGRWSLDDD-LFRRVFPFSLRPQAHEIIRTWLFSTAVRAELEEGVL 554

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V S   +    +K+SKS+GNV+ P +++E  G DA+RY+               D
Sbjct: 555 PWRDAVISGWVLDPDRKKMSKSVGNVVTPADLLERHGSDAVRYWAASARPGVDTAV---D 611

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
             + +V   LA  + N+    + +         P   A    D S+L+  ++V++E    
Sbjct: 612 EGQMKVGRRLATKLLNVSKFVLGL-----GVPKPESSATEPLDRSVLAALAKVIEEATAA 666

Query: 405 MQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQ 463
            +     RAL    +      D Y +  K         + A +       V+  L  +  
Sbjct: 667 FEALDQARALQVTETFFWTFCDDYVELVKGRAYGDLGAEAAESAQVALRTVLSALVRMFA 726

Query: 464 AFVPKLANKIFD 475
             +P  A +I+ 
Sbjct: 727 PVLPFAAEEIWS 738



 Score = 74.0 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 36/164 (21%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + R  +Y I T     +   HIGH +     DVLAR+ R+ G  V +  G D++G    +
Sbjct: 32  RSRPDVYSIDTPPLTASGSLHIGHVFSYTHTDVLARYQRMRGRSVFYPVGWDDNGLPTER 91

Query: 61  AAQNA-------------GVTTKVFVDQN--------------------SRNFRDMADVL 87
             QN                       +N                     + F ++   +
Sbjct: 92  RVQNHFGVRCEPSLPYDLSFAPPEKPGKNAIPVSRRNFVELCRQLTETDEKVFEEVWRSI 151

Query: 88  DISYDDFIR--TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYS 129
            +S D  +   T +    +  +  + +   +G+ Y+      + 
Sbjct: 152 GLSVDWTLAYQTIDPATTEISQRAFLRNLARGEAYQSEAPTLWD 195


>gi|242373479|ref|ZP_04819053.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348842|gb|EES40444.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 916

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLENRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLAD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY-DGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I     +          + D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDYNPETDRIPENDLLDVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LVDMTKLLAPILVHTAEEVWSH 770



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K  +   +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KGNQSYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALKQVDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|229587045|ref|YP_002845546.1| valyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259516949|sp|C3PLG3|SYV_RICAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|228022095|gb|ACP53803.1| Valyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 812

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 118/335 (35%), Gaps = 22/335 (6%)

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKT--FDWGIKI 220
           E +   +S         Y   P  +   +R  E    + + +  L +           K 
Sbjct: 388 ENWINAISWDWCISRQRYFGVPFPVWYSKRVGEEGKILYADVTQLPIDPLKDLPVGYSKE 447

Query: 221 PDDPQY-IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY- 274
             +P Y +M  W  +  +   +T  + +          K +P DL     +I+R  A Y 
Sbjct: 448 EVEPDYDVMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYT 507

Query: 275 -WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              A L    LP    + +   +     K+SKS GNV+ P +++E+ G D +RY+     
Sbjct: 508 ILKAHLHQNTLPWKNIMVNGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK 567

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV--SMILKDYDGM----IPTPGAFTESD 387
             G D  Y +D    +    L N + N           LK  D              E D
Sbjct: 568 -LGADTTYSED--VMKNGKRLVNKLWNAAKFVFIHFDKLKGEDKKASLLDIKEKITNEFD 624

Query: 388 ESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKT--NPDR 443
           + +++    +++     +QN     A+            D Y +  K     +   NP  
Sbjct: 625 KWMVNKLVELVKLATNELQNYEYANAMHLTEKFFWVVLCDNYLEISKTRSYDEEHKNPQG 684

Query: 444 ASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + +     V++ L  L   F+P +  +++ IL+
Sbjct: 685 QYSSILTLYHVMQTLLKLFAPFMPHITEELYQILY 719



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 15/148 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  VAKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNA------GVTTKVFV-------DQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +         +    F+       +     FR + + + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNMDRSEFIKICEEVVESEEEKFRSLFNQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDE 133
            ++ +  +  K +IY+      +   D 
Sbjct: 153 SQMSFLDLVQKEEIYRTNQPILWDPVDG 180


>gi|147856553|emb|CAN82480.1| hypothetical protein VITISV_012746 [Vitis vinifera]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 77/237 (32%), Gaps = 20/237 (8%)

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +       +  +P             +G K+SK+LGNVIDPI+ I+E G DALR+ L   
Sbjct: 1   MVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFGTDALRFTLALG 60

Query: 333 IACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDE---- 388
            A G+D     + L    N    N + N     +  +    D          + D+    
Sbjct: 61  TA-GQDLNLSTERLTS--NKAFTNKLWNAGKFVLQNLPSQSDISAWETILACKFDKEEAL 117

Query: 389 --------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK 438
                    ++S    ++  +  + +         +          D Y +A K      
Sbjct: 118 LRLPLPECWVVSKLHCLIDMVTTSYEKYFFGDVGRETYDFFWGDFADWYIEASKARLYHS 177

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKP 495
                A  V    + V   +  +L  F+P +   ++  L          S  Q   P
Sbjct: 178 GGHSVAQAV---LLYVFENILKMLHPFMPFVTEALWQALPNRKXALMNSSWPQTSLP 231


>gi|240124950|ref|ZP_04737836.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268683529|ref|ZP_06150391.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268623813|gb|EEZ56213.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +          H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|239998201|ref|ZP_04718125.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268594054|ref|ZP_06128221.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547443|gb|EEZ42861.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317163487|gb|ADV07028.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +          H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|260172788|ref|ZP_05759200.1| leucyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315921074|ref|ZP_07917314.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694949|gb|EFS31784.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|253751328|ref|YP_003024469.1| isoleucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753229|ref|YP_003026369.1| isoleucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755052|ref|YP_003028192.1| isoleucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251815617|emb|CAZ51203.1| isoleucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817516|emb|CAZ55260.1| isoleucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819474|emb|CAR44998.1| isoleucyl-tRNA synthetase [Streptococcus suis P1/7]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 103/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVMNARENLAYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +   G K+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 572 AVNGHAPYKAILSQGFVLDGNGMKMSKSLGNTILPSDVEKQFGAEILRLWVTSVDTS-ND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +L  
Sbjct: 631 VRVSMDILGQVSET------YRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLLVK 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT----NPDRASTV 447
            ++++ +IRE   N         V++ V       Y D  K           +  +  TV
Sbjct: 685 FNKLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEHEAEE 777



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKVFV-DQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
               GV  K     +     RD     +D   DDF R            T  K +     
Sbjct: 105 LAKQGVKRKEMDLVEYLEMCRDYAFSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 165 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 214


>gi|327191133|gb|EGE58178.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 968

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 127/380 (33%), Gaps = 33/380 (8%)

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYF 166
           +          D          ++ D  +        G +      +  P      +   
Sbjct: 455 QWFVYMDKTLPDGTTLRTRALTAIDDTRFVP----AAGQNRLRAMIEQRP------DWVL 504

Query: 167 FRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDP-- 224
            R  A+   +  + + H   +        ++    +   D   +    +  +    DP  
Sbjct: 505 SRQRAWGVPICVFVDEHGAVLQDEAVNARILDAFDAEGADAWFAEGAKERFLGNEHDPAK 564

Query: 225 ----QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPADL++ G D     FH+    + 
Sbjct: 565 WSQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFHSSLLESA 618

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++       D
Sbjct: 619 ATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAGADILRLWVMTSDYA-DD 677

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D    I       E ++ +L   + + 
Sbjct: 678 LRVGKTIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEEI-ALANLPELEQLMLHRLAELD 734

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           Q +REN       +    +I   + E+   YFD +K   L    P   R    L+V  ++
Sbjct: 735 QLVRENYDAFDFKKIARALIDFANVELSAFYFDVRKD-ALYCDAPSSLRRRASLHVIRQI 793

Query: 455 IRQLAILLQAFVPKLANKIF 474
              +   L   +P    + +
Sbjct: 794 FDCMVTWLAPMLPFTTEEAW 813



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 11/105 (10%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWDCHGLPIEWKI 112

Query: 63  QNAGV-----------TTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           +                    ++            + +  D+F R
Sbjct: 113 EEENYRAKGKAKPDLKEPAAMIEFRRECRAYAEKWIKVQGDEFQR 157


>gi|303247249|ref|ZP_07333523.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491408|gb|EFL51296.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 940

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/466 (16%), Positives = 146/466 (31%), Gaps = 30/466 (6%)

Query: 23  GHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRD 82
           GH  E    D   R+    GLDVL     D+ G+ +      AG+T      +     ++
Sbjct: 337 GHGREDY--DTGLRY----GLDVLSPM--DDAGRFLDVVPYFAGLTVWEANPKVIEKLKE 388

Query: 83  MA-----DVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYN 137
           +        +  SY    R  E          +  +       +   +    +     + 
Sbjct: 389 VGNLLAERKIRHSYPHCWRCKEPVIFRATTQWFISMEVGDLRNRALAAIDGEVEWIPAWG 448

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
            + ++    G+          W          S       + +            R    
Sbjct: 449 RERIHNMIAGRPDWCISRQRTWGVPILALICESCDTAYNDAAWMRSVAEKFANHERGCDY 508

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
            F       +       + G         I+ VW D+ T+      +    +      +P
Sbjct: 509 WFEADLADIVPAGLTCPNCGGSHWRKETDILDVWFDSGTS------FAAVLEKRPELAFP 562

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           A+L++ G D     FH+    +       P  + +     +  +G K+SKSLGN I+P E
Sbjct: 563 ANLYLEGSDQHRGWFHSSLLASLATRGTPPYRQVLTHGYVVDGEGRKMSKSLGNGIEPQE 622

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           +I++ G + LR +    +    D    ++ L + V  +    I N     +   L D+D 
Sbjct: 623 IIDKHGAEILRLW-TSAVDYRDDIRLSEEILSRLV--EAYRRIRNTCRFVLG-NLSDFDP 678

Query: 376 MIPT--PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
            +    P +    D   +   +R    I E  +    H+    + +L        Y D  
Sbjct: 679 AVNDVAPQSMLPLDSYAVDTAARAHARIAEAYEAYEFHKVFHALHNLCVTDLSAFYLDIL 738

Query: 432 KPW-ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI 476
           K    +  T+     +       ++R L   +   +   A ++F  
Sbjct: 739 KDRLYVSATDSLERRSAQAALWRILRVLLRDMAPILSFTAEEVFRH 784



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++  +  +     Y N   H+GHA   I+ D++ +   + G    +  G D HG  I   
Sbjct: 47  EDAPRYVLHDGPPYANGHLHMGHALNKILKDIIVKSRHMAGNQAPYVPGWDCHGLPIEHK 106

Query: 62  AQNAGVT--------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
                                 + +  +     R     L +   +DD   T    +   
Sbjct: 107 VSQELTAKGKTNLPAITVRRLCRDYATKFVDIQRKEFKRLGVFGDWDDPYLTMRPSYEAA 166

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +      +KG +Y+G     + L       + EV  
Sbjct: 167 TALALCDFVEKGSVYRGKKPIHWCLSCRTALAEAEVEY 204


>gi|293369279|ref|ZP_06615866.1| leucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292635609|gb|EFF54114.1| leucine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|167044145|gb|ABZ08828.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG5C13]
          Length = 951

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/388 (15%), Positives = 141/388 (36%), Gaps = 62/388 (15%)

Query: 149 YYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLS 208
                   V  +    +F        K  +        ILP   R E  ++V   L + +
Sbjct: 429 RCRCGAECVVKILTNQWFLNYRDKAWKEKATKCLDGMSILPQHIRPE-FNYVIGWLHERA 487

Query: 209 LSRKTFDWGIKIPDDPQYIM-----------------------------------YVWID 233
            +R+    G K+P + ++I+                                   YV++ 
Sbjct: 488 CARQ-HGLGTKLPWNKEWIVESLSDSVIYMAYYIIAKFVNAGVISAEKLSKEFFDYVFLG 546

Query: 234 ALTN--YLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFL--LSANLPLPKK 289
             ++         ++      + F+P D    G+D++  H  ++      +      P++
Sbjct: 547 IGSSDVSGVPKDIVEEIRAEFSYFYPVDSRHSGRDLVPNHLTFFVLNHVAIFPENNWPQQ 606

Query: 290 VFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKR 349
           +  +G +L  G+K+SKS+GN+I   E + + G D +R  ++      +D  ++ + +K  
Sbjct: 607 IVVNGSVLMDGKKMSKSMGNIIPLREAVRKYGADPIRLTILISAELLQDADFNVEAIKGI 666

Query: 350 VNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQL 409
            N      + ++         + +             D+ I  +   ++    ++M    
Sbjct: 667 KN-----KLASMYEDCTKTKAEKFP-------ELEPEDKWIHGILQNLVLNAGKSMDEIR 714

Query: 410 IHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKL 469
           +  AL  +  L       FD++  W LK+T   + + +  +  +++    ++L  F P +
Sbjct: 715 LREALHHI--LFD-----FDSELQWYLKRTKSKQRTNISGILHKILSYRVLMLSPFAPHI 767

Query: 470 ANKIFDILFVAD--ENRCFQSLDQRLKP 495
           A ++++ L  +       + S+   + P
Sbjct: 768 AEEMWEKLGHSGLVSQSSWPSVSDVIDP 795



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 26/170 (15%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            +EK +I+ A  YPN+  HIGH     I DV +R+ R+ G +VLF  G    G  I   +
Sbjct: 28  NKEKKFITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGFNVLFPMGFHYTGTPILGMS 87

Query: 63  Q------------------------NAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIR 96
           +                           V      +   +  +     +  S D      
Sbjct: 88  KRVEAGDIEIIDGLKNVYNVPDEAIKTFVEPIKIANYFHQEIKAGMIEMGYSIDWRREFT 147

Query: 97  TTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           T +  +          + +K  I +G +   +  +D+   +  +     +
Sbjct: 148 TIDPAYQKFIEWQINTLKEKNLIVQGSHPVGWCPKDQNPVSQHDTMGDVE 197


>gi|187736142|ref|YP_001878254.1| leucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426194|gb|ACD05473.1| leucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 857

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 15/191 (7%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            + K Y+     YP+    H+GH       D++ARF R++G +VL   G D  G    + 
Sbjct: 40  SKPKYYVLDMFPYPSGAGLHVGHPEGYTATDIVARFKRMNGFNVLHPMGWDSFGLPAEQY 99

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V   +N  NFR    +L  SY  D  I TT+  +    + ++ ++ +    
Sbjct: 100 AIKTGQHPSVTTFRNIDNFRRQLKMLGFSYDWDREIATTDHEYVRWTQWIFLQLYNSYYN 159

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN------------PVQWMEEEGYFF 167
            +   +   S  +E   + +E+ +        A  N             V+  + +G+  
Sbjct: 160 KELKKARPVSELEEQGLSREEIDQRRLAYVAEAAVNWSPDLGTVLANEEVEEWKSKGHRV 219

Query: 168 RLSAYQDKLLS 178
                +  +L 
Sbjct: 220 ERRPLRQWMLR 230



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 43/252 (17%)

Query: 258 ADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGN 309
            DL+V G +    H +Y   +         LS N P  K V     +   G+K+SKS GN
Sbjct: 563 VDLYVGGTEHAVLHLLYARFWHKVLFDLGYLSTNEPFQKLVNQGLILGEDGQKMSKSRGN 622

Query: 310 VIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMI 369
           V++P +++ E G D+LR + +          +   G++         GI   ++R   + 
Sbjct: 623 VVNPDDIVREYGADSLRLYEMFMGPLKDVKPWATKGVE---------GISRFLARVWRVA 673

Query: 370 LKDYDGMIPTPGAFTESDE------SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE 423
            ++         +    +       ++     + ++++ E++     + A+A+++   + 
Sbjct: 674 FRENQEGEWEINSKLVENAPEAGVLAVRKELHKTIKKVTEDINGMSFNTAIAKMMECTNA 733

Query: 424 VDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
                                ++   V V+       LL  F P L  +I   L  A   
Sbjct: 734 --------------------MTSADVVDVQDYDAFLTLLNPFAPHLTEEIHSRLQTAFPA 773

Query: 484 RCFQSLDQRLKP 495
                L Q+  P
Sbjct: 774 LAQTQLCQKSWP 785


>gi|37524595|ref|NP_927939.1| isoleucyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81420332|sp|Q7N8X2|SYI_PHOLL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|36784019|emb|CAE12886.1| isoleucine tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 937

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 128/389 (32%), Gaps = 42/389 (10%)

Query: 121 KGCYSGWYSLRDEAYY---NDDEVYKGADGQYYN--AQHNPVQWMEEEGYFFRLSAYQDK 175
           +  Y   +  +    +       V    +G       +   VQW+   G     +  +++
Sbjct: 400 QHSYPCCWRHKTPIIFRATPQWFVSMDQNGLRKQSLQEIKGVQWIPGWGQARIEAMVENR 459

Query: 176 LLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ------ 225
                     +  P+     +  E +      L +    R   D GI+   D +      
Sbjct: 460 PDWCISRQRTWGTPMSLFVHKETEELHPRTIELMEEVAKRVEVD-GIQAWWDLEPAELLG 518

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + + +         G+      AD+++ G D     F + 
Sbjct: 519 DDAANYVKIFDTLDVWFDSGSTHASVVDARPEFQGNA-----ADIYLEGSDQHRGWFMSS 573

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  +    P  + +     +  +G K+SKS+GN I P +V++++G D LR ++    
Sbjct: 574 LMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMDKLGADILRLWVASTD 633

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESIL 391
             G+    D+     + +AD    I N   R +   L  +D       P      D   +
Sbjct: 634 YTGEIAVSDE---ILKRSADAYRRIRNTA-RFLLANLNGFDPEQHSVKPEEMAVLDRWAV 689

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVL 448
                   +I +       H  + +++   S      Y D  K  +   K++     +  
Sbjct: 690 GCAQAAQADIAKCYDKYDFHTVVQRMMQFCSVEMGSFYLDIIKDRQYTAKSDSLARRSCQ 749

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +   L   +   +   A+++++ L
Sbjct: 750 TALYHIAEALVRWMAPILSFTADEVWNEL 778



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 17/206 (8%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I    
Sbjct: 47  GKKTFILHDGPPYANGSIHIGHSVNKILKDIIIKSKGMAGYDSPYIPGWDCHGLPIELKV 106

Query: 63  QNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +                     +  +     +     L I   ++    T + +      
Sbjct: 107 EQIIGKPGEKFSAAEFRAECRKYAKEQIEGQKKDFIRLGILGDWERPYLTMDFKTEADII 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV-YKGADGQYYNAQHNPVQWMEEEGYF 166
               +I   G + KG     +     +   + EV Y        + + N V  +      
Sbjct: 167 RALSRIIANGHLLKGAKPVHWCTDCRSSLAEAEVEYYDKTSPSIDVRFNAVDAV-AVCEK 225

Query: 167 FRLSAYQDKLLSYYESHPEFILPIER 192
           F + A +  +     +   + LP  R
Sbjct: 226 FGVQAPEQPVSLVIWTTTPWTLPANR 251


>gi|229815197|ref|ZP_04445533.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
 gi|229809207|gb|EEP44973.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
          Length = 942

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 114/307 (37%), Gaps = 17/307 (5%)

Query: 206 DLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGK 265
            L  +      G       + I+ VW D+  ++     Y           +PAD+++ G 
Sbjct: 532 YLGDACVCPKCGGHHLKADRDILDVWWDSGVSWKAVCEYRP------ELKYPADVYLEGS 585

Query: 266 DIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVD 323
           D     F +    +   +   P    +     +  +G K+SKSLGNVIDP ++ +E+G D
Sbjct: 586 DQHRGWFQSSLLTSVGTNGIAPYKAVISQGFTLDGQGRKMSKSLGNVIDPNKICDEMGAD 645

Query: 324 ALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPG 381
            +R ++        D   D + L +   +D      N +   +S++   ++         
Sbjct: 646 IIRLWVASVDTST-DVACDHEILAR--TSDAYRRFRNTLRFLLSVLEGQFEPTTDGVAFD 702

Query: 382 AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWEL-KK 438
                D+ +L+  ++V  E+    +    +RA   +   V     + Y DA K     ++
Sbjct: 703 ELMPLDKLMLARLTQVQAEVDAAYEGFEFNRAYRTLYDFVVTELSNVYLDALKDRLYCER 762

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKPGF 497
                  +   V  E++  L   LQ  +    ++  +       +N+ + +L    K   
Sbjct: 763 PGSHEMRSAQTVVAELLSMLMRDLQPILSYTVDEAMEFAPAGCRDNQEYAALLDWYKSPI 822

Query: 498 MLHKTFD 504
            L +  +
Sbjct: 823 TLEQANE 829



 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 16/158 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +  EK  +     Y N   H+GHA   I  D++ R+  + G +  +  G D HGQ I   
Sbjct: 56  EGHEKFVLHDGPPYANGPIHLGHAMNKIAKDMINRYKAMQGYETPYVPGWDCHGQPIEHK 115

Query: 62  AQNAGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDT 105
            +    T K               F  +N    R+    L +   +D+   T   +H   
Sbjct: 116 VETQMGTEKFNQASTAEIRELCNKFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAA 175

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
               +K + D+G +Y+G     +         + E+  
Sbjct: 176 DIEAFKAMFDRGMVYRGHKPVHWCKHCHTALAEAEIEY 213


>gi|15603527|ref|NP_246601.1| isoleucyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81636547|sp|Q9CKF7|SYI_PASMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12722068|gb|AAK03746.1| IleS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 932

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 75/490 (15%), Positives = 150/490 (30%), Gaps = 61/490 (12%)

Query: 34  LARFHR-LDGLDVLFTTGTDEH---GQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI 89
             RF        V F  G       G  +   A + G    +   +N      +     I
Sbjct: 305 WLRFQHPFYDFSVPFILGDHVTTDGGTGLVHTAPDHGHDDYIIAQKNGIEMAGL-----I 359

Query: 90  SYDDFIRTTEK--------RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDE---AYYND 138
             D   +              +D      +++       K  +S  +  R +    +   
Sbjct: 360 GNDGLFKADVPFFAGKGVFESNDLVVAKLQEVGAMLKFSKIKHSYPHCWRHKTPIIFRAT 419

Query: 139 DEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI---- 190
            + + G + Q    Q       V+W+ + G        +++          + +P+    
Sbjct: 420 PQWFIGMEKQGLRQQALSEIKKVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPVALFI 479

Query: 191 ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----------------YIMYVWIDA 234
            +  E +      L +    R     GI+   D                    + VW D+
Sbjct: 480 HKETEELHPRTVELVEEVAKRVE-QKGIQAWWDLDTAELLGADADNYIKVPDTLDVWFDS 538

Query: 235 LTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFS 292
            + Y +        +G +     AD+++ G D     F +    +       P  + +  
Sbjct: 539 GSTYYSVVKDRPEFNGQE-----ADMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTH 593

Query: 293 HGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNA 352
              +  +G K+SKS+GN++ P EV+++ G D LR ++         G         +  A
Sbjct: 594 GFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYT---GEISVSDEILKRAA 650

Query: 353 DLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSRVLQEIRENMQNQLI 410
           D    I N   R +   L  +D       P      D   +    +   EI++   N   
Sbjct: 651 DAYRRIRNTA-RFLLANLNGFDPKRDLVKPEEMMVLDRWAVDCAYQAQNEIKDAYDNYQF 709

Query: 411 HRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
           H  + +++   S      Y D  K  +   K +     +       +   L   +   + 
Sbjct: 710 HAVIQRLMKFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPVLS 769

Query: 468 KLANKIFDIL 477
             A++I+  +
Sbjct: 770 FTADEIWQYI 779



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +     G D  +  G D HG  I   
Sbjct: 47  KGKKSFILHDGPPYANGTIHIGHAVNKILKDIIVKSKTALGYDSPYIPGWDCHGLPIELK 106

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +     +     L +   +D+   T         
Sbjct: 107 VEGLVGKPNQNISAAQFREACRQYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNYHTEANI 166

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
              + K  + G +YKG     + L   +   + EV  
Sbjct: 167 IRAFGKAVENGHLYKGSKPVHWCLDCASSLAEAEVEY 203


>gi|324990662|gb|EGC22598.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 100/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V +  G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKHFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR    +         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRNAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L   +E 
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEHEEEE 777



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        ++    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|314982032|gb|EFT26125.1| valine--tRNA ligase [Propionibacterium acnes HL110PA3]
          Length = 880

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 90/258 (34%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 526 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 583

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 584 NGMLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 642

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+    ++ E
Sbjct: 643 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRELIAE 695

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 696 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 755

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 756 MLRLFAPFLPFVTEEVWS 773



 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 66  FAIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 125

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 126 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 185

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 186 WNQLYTTISPESQRIAQLAFLRNYARGEAY 215


>gi|219126095|ref|XP_002183300.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405056|gb|EEC45000.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1177

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 96/270 (35%), Gaps = 18/270 (6%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
             +   W ++ +     + Y         K +PAD    G D     F+ +   +  L  
Sbjct: 537 DEVFDCWFESGSMPYAQSHYPFENKEGWEKGFPADFIAEGLDQTRGWFYTLMVLSTALFD 596

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
                  + +   +   G+K+SK   N  DP  VI + G DALR +LV       +   +
Sbjct: 597 KPAFKNNIVNGMVLASDGQKMSKRKKNYPDPNIVISKYGADALRMYLVNSPVVRAESLKF 656

Query: 342 DKD---GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAF----TESDESILSVC 394
            ++   G+ K V   L N     +       L+     +P           +D  I +  
Sbjct: 657 KEEGVLGVVKEVFLPLYNAFRFFLQNIERWELEGSSKFVPDLDKVRQTANPTDIWIQAET 716

Query: 395 SRVLQEIRENMQNQLIHRALAQVISL-VSEVDRYFDAQKPWELKKTNPD------RASTV 447
             +++ + E M    ++  +  ++S      + Y    +   LK    +       A T 
Sbjct: 717 QGLIKFVHEEMGAYRLYTVMPALVSFGTQLTNWYVRLNRD-RLKGAEGEGQEADIEAETG 775

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           L V  +V+  +++++  F P +    +  L
Sbjct: 776 LQVLYDVLLNVSMIMAPFTPFITEFFYQHL 805



 Score = 60.9 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 19/147 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI-------------- 58
             +    PH GH     I D + R+  + G  V    G D HG  +              
Sbjct: 48  PPFATGLPHYGHILAGTIKDTVTRYAAMSGKHVSRRAGWDCHGLPVEYEIDQKLNITHRD 107

Query: 59  ---AKAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                       T +  V + +  +      L   I +++  +T +    ++   +++++
Sbjct: 108 QVLEMGIDKYNATCRSIVTRYTAEWESTVTRLGRWIDFENDYKTMDPSFMESVWWVFRQL 167

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            DK  +Y+G     YS       ++ E
Sbjct: 168 FDKNLVYQGYKVMPYSTACTTPLSNFE 194


>gi|57238808|ref|YP_179944.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819291|sp|Q5HC99|SYV_EHRRW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57160887|emb|CAH57790.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 810

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 131/377 (34%), Gaps = 19/377 (5%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE-EGYFFRL 169
           + + +     +        L ++ +    E+      Q       P    ++ E +   L
Sbjct: 342 EILHNVKCAERSGMPIEILLSNQWFIKVVEIKHELLEQVRKINWYPQSMRKQIEMWIDGL 401

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-YIM 228
           +         Y   P  +   +R NE I         +  +        K   +    +M
Sbjct: 402 NWDWCISRQRYFGIPFPVWYSKRDNEEIIIPDVNELPIDPTETLPQGYSKEEVEADVDVM 461

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPL 286
             W  +  +    + +            PA L     +I+R  A Y    A+    ++P 
Sbjct: 462 DTWATSSLSPQFNSIHTGINSIPLI---PASLRAQSHEIIRSWAFYTILQAYYHHNSIPW 518

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + S   +     K+SKS GN + P ++++E G D +RY+       G D  +  + L
Sbjct: 519 ENIMVSGWCLAADKSKMSKSKGNALIPNQLLQEYGADVIRYW-AANSRLGSDTVFSDEVL 577

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENM 405
           +  +   L   + N        + +     IP     TE  D+ +L+   +V+ +  E+ 
Sbjct: 578 Q--LGKRLVTKLWNASKFVSMFVSQ---CQIPDLNCVTETMDKWVLTKLYKVIVKATESF 632

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAIL 461
                  AL  + S       D Y +  K     +  TN +  S V  ++  V+  L  +
Sbjct: 633 NVFEYCVALDYIESFFWKDFCDNYLELVKKRAYGESVTNKENLSAVNTLSF-VLMALLKM 691

Query: 462 LQAFVPKLANKIFDILF 478
           L  F+P +  +I+  L+
Sbjct: 692 LAPFMPYITEEIYSTLY 708



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 15/152 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           ++  I T     + Q HIGH +     D +AR+ R+ G DVL+  G D++G         
Sbjct: 36  KQFIIDTPPPTISGQLHIGHVFSYCHTDFIARYQRMLGKDVLYPIGFDDNGLPTERLVEK 95

Query: 60  -KAAQNAGVTTKVFVDQNSR-------NFRDMADVLDISYDD--FIRTTEKRHHDTCRIL 109
            K  + A +  K F    +         F+ +   L ISYD      T  +      ++ 
Sbjct: 96  IKKVRAADIDRKEFKALCNEVSAKFRMEFKILFQSLGISYDWDLEYHTISEEIQKLSQMS 155

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  + + G IY+     ++   D       EV
Sbjct: 156 FIALYNMGKIYRKLQPIFWDCADRTAIARVEV 187


>gi|261380481|ref|ZP_05985054.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796729|gb|EFC52076.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 535 MDVWFDSGSTHYSVLK------QREELDWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 588

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 589 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 641

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE---- 400
               +            +  ++S +  +     P   A  ++D   +   + VL      
Sbjct: 642 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLARQLQE 701

Query: 401 --IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVI 455
               +       H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 702 RLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHIT 761

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 762 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPSINEKAEAELVKKWTAI 817



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D+   T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDNAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           S  + K  +   +   + LP 
Sbjct: 226 SDIEGKAFAVIWTTTPWTLPA 246


>gi|198462418|ref|XP_001352408.2| GA11021 [Drosophila pseudoobscura pseudoobscura]
 gi|198150818|gb|EAL29904.2| GA11021 [Drosophila pseudoobscura pseudoobscura]
          Length = 1229

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/472 (14%), Positives = 140/472 (29%), Gaps = 45/472 (9%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               D+ G+   +A+   G   K        N +   +++       SY    R+     
Sbjct: 358 ICPVDDAGRFTKEASDFEGQYVKDADKHIMANLKASGNLVSSGQVKHSYPFCWRSDTPLI 417

Query: 103 HDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + ++        D     Y     ++++ + N  +  +            P+ 
Sbjct: 418 YKAVPSWFVRVEHMSKNLLDCSSQTYWVPDFVKEKRFGNWLKDARDWAISRNRYWGTPIP 477

Query: 159 WMEEEG---YFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
                         S  Q   LS               N  I     G   L        
Sbjct: 478 IWRSPNGEETVVIGSIKQLAELSGVLVEDLHR--ETIDNIEIPSAVPGNPPLRRIAP--- 532

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                      +   W ++ +       +    +      +PAD    G D     F+ +
Sbjct: 533 -----------VFDCWFESGSMPFAQQHFPFENEKDFMNNFPADFIAEGIDQTRGWFYTL 581

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +  L    P    + S   +   G+K+SK   N  DP+EV+ + G DALR +L+   
Sbjct: 582 LVISTALFNKAPFKNLIASGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINSP 641

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKD--------------YDGMIPT 379
               +    K+   + V  D+     N     +  I++                D  +  
Sbjct: 642 VVRAESLRFKEEGVRDVIKDVFLPWYNAYRFLLQNIVRYEKEDLAGKGQYSYQRDRHLKN 701

Query: 380 PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKK 438
               +  D  ILS    +L+     M+   ++  + ++   + ++ + Y    +     +
Sbjct: 702 MDQASVIDVWILSFKESLLEFFATEMKMYRLYTVVPRLTKFIDQLTNWYVRLNRRRIKGE 761

Query: 439 TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              ++    L    +V+  +  ++  F P L   IF  L +       +  D
Sbjct: 762 LGSEQCIQSLDTLYDVLYTMVKMMAPFTPYLTEYIFQRLVLFQPPGSLEHGD 813



 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 27/237 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 44  KGKPKYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAYQQGYHVDRRFGWDCHGLPVEFE 103

Query: 62  AQN--AGVTTKV-----FVDQNSRNFRDMADVLD------------ISYDDFIRTTEKRH 102
                     +          N+   + +    D            I + +  +T    +
Sbjct: 104 IDKLLNIRGPEDVAKMGITAYNAECRKIVMRYADEWENVVTRVGRWIDFKNDYKTLYPWY 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ DKG +Y+G     YS       ++ E  +      Y    +P   +  
Sbjct: 164 MESIWWIFKQLFDKGLVYQGVKVMPYSTACTTSLSNFEANQN-----YKEVVDPCVVIAL 218

Query: 163 EGYFFRLSAYQDKLLSYYESHPEF---ILPIERRNEVISFVKSGLKDLSLSRKTFDW 216
           E      + +     + +     F   + P     +V       L  L+ SR ++ +
Sbjct: 219 EALALPNTFFLVWTTTPWTLPSNFACCVHPTMTYVKVRDVKSDRLFILAESRLSYVF 275


>gi|146318143|ref|YP_001197855.1| isoleucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320330|ref|YP_001200041.1| isoleucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145688949|gb|ABP89455.1| Isoleucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691136|gb|ABP91641.1| Isoleucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292557901|gb|ADE30902.1| Isoleucyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
          Length = 930

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 103/276 (37%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +    +  +   +PADL++ G D     F++    + 
Sbjct: 519 FTKETDIMDVWFDSGSS------WNGVMNARENLAYPADLYLEGSDQYRGWFNSSLITSV 572

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++ + P    +     +   G K+SKSLGN I P +V ++ G + LR ++        D
Sbjct: 573 AVNGHAPYKAILSQGFVLDGNGMKMSKSLGNTILPSDVEKQFGAEILRLWVTSVDTS-ND 631

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +L  
Sbjct: 632 VRVSMDILGQVSET------YRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLLVK 685

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT----NPDRASTV 447
            ++++ +IRE   N         V++ V       Y D  K           +  +  TV
Sbjct: 686 FNKLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQMQTV 745

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E 
Sbjct: 746 FY---DILVKITKLLTPILPHTAEEIWSYLEHEAEE 778



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +   ++     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 46  EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIEQV 105

Query: 62  AQNAGVTTKVFV-DQNSRNFRDM-ADVLDISYDDFIR------------TTEKRHHDTCR 107
               GV  K     +     RD     +D   DDF R            T  K +     
Sbjct: 106 LAKQGVKRKEMDLVEYLEMCRDYAFSQVDKQRDDFKRLGVSADWENPYITLTKDYEAAQI 165

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++  ++DKG IY+G    ++S   E+   + E+             N V
Sbjct: 166 RVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKV 215


>gi|302348087|ref|YP_003815725.1| Valyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328499|gb|ADL18694.1| Valyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 821

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 77/434 (17%), Positives = 142/434 (32%), Gaps = 43/434 (9%)

Query: 78  RNFRDMADVLDISYDDFIRTTEK-------RHHDTCRILWKKISDKGDIYKGCYSGWYSL 130
           R FR++     +  D   R TE+       +  +  R + +++  +G + K         
Sbjct: 290 RLFRELNLKPKVIIDQDGRMTEEAGFLAGLKVEEARRKVVEELEKRGLLVKKVKVKHTVP 349

Query: 131 RDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPI 190
                    ++    +           Q  E          +  + L  +        PI
Sbjct: 350 VCWRCKTPLQIINRTELFLRQLDLRE-QMKELVSKLDVRPEFHRRKLLEWLDSIAMDWPI 408

Query: 191 ERRNEV------ISFVKSG-LKDLSLSRKTFDWGIKIPDD--------------PQYIMY 229
            R              K G L      R    W  + P D                 +  
Sbjct: 409 SRDRYYGTEIPLWRCTKCGSLLVPEPGRYYRPWEEEPPWDRCPACGAPKEYLKGETRVFD 468

Query: 230 VWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPLP 287
            W D+  + L  T +L++P+  K K  P  L   G+DI+R    Y     + L+      
Sbjct: 469 TWFDSSISMLYVTKWLEDPEFFK-KASPNVLRPQGEDIIRTWLYYSLLRVYQLTGKPAFR 527

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
               +   +  KG  + KSLGNVIDP  +I + G DA R++       G D  YD+  + 
Sbjct: 528 WIRITGMGLDPKGRPMHKSLGNVIDPDPIISKYGADAFRFWAASSAKLGYDYRYDEKKVI 587

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                + A  + NL     +              +    D + L++  + L    +  ++
Sbjct: 588 --TGRNFATKLWNLARFISAF------PESQEVSSLRPIDRAFLALAQQYLDAAVKGYED 639

Query: 408 QLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNP-DRASTVLYVTVEVIRQLAILLQA 464
             ++    Q+  L        Y +  K     +  P +  ++  Y    + R   +LL  
Sbjct: 640 LDVYEPAVQLYELSWNVFAAHYVELVKDRAYSEGYPYEDRASAWYTLHRIFRAALVLLSP 699

Query: 465 FVPKLANKIFDILF 478
            +P + + I+  L+
Sbjct: 700 IMPFVTDYIYRQLY 713



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 19/151 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +E+E L I T   Y + + H+G A      D++AR+ RL G  VL     D +G  +   
Sbjct: 38  REKEVLVIDTPPPYASGKWHVGGAAHYAQIDMIARYFRLKGYYVLVPFYADRNGLPVEVQ 97

Query: 62  AQ--------NAGVTTK----------VFVDQNSRNFRDMADVLDISYDDFIR-TTEKRH 102
            +            T +           F+D+  ++  ++   L  S+D +   T   ++
Sbjct: 98  VEKTYNINAKEMAATPEGRRKFLELCREFLDKAEKDLVNVWTRLGCSFDYWRDGTDSPKY 157

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDE 133
               +  +  +  +G IY+      +  R  
Sbjct: 158 RTMTQRTFIDLFKRGMIYEAERPVRWCPRCG 188


>gi|260583475|ref|ZP_05851223.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158101|gb|EEW93169.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 69/455 (15%), Positives = 147/455 (32%), Gaps = 31/455 (6%)

Query: 37  FHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
           F+     ++   +  D  G    +A    G+         +    +   +L++SY  F+ 
Sbjct: 334 FYYSRKYNLAVLSPVDSQGCYTDEAPGFEGMFYADANKVITDLLTEKGALLNLSY--FVH 391

Query: 97  T--TEKRHHDTCRILWK-KISDKGDIYKGCYSGWYSLRDEAYYNDDEVY-KGADGQYYNA 152
           +   + R           +     D ++           + Y+   +V          + 
Sbjct: 392 SYPHDWRTKKPVIFRATPQWFASIDAFRQEILDVIENDVKWYHPSGQVRIYNMVRDRGDW 451

Query: 153 QHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRK 212
             +  +        F     +  +      H   I      +    +    L     +  
Sbjct: 452 VISRQRVWGVPLPVFYAENGEPIITPETTEHVAQIFEKHGSDVWFEWDAKDLLPEGFTHP 511

Query: 213 TFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RF 270
               GI        IM VW D+ +++    G        +   +PAD+++ G D     F
Sbjct: 512 DSPNGI--FTKELDIMDVWFDSGSSHAGVLG------TREELSFPADMYLEGSDQYRGWF 563

Query: 271 HAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV 330
           ++    +  +    P    +     +  +G+K+SKSLGNVI P + ++  G D +R ++ 
Sbjct: 564 NSSLTTSVAIHHQAPYKSVLSQGFVMDGEGKKMSKSLGNVISPAKEMKTKGADIIRLWV- 622

Query: 331 REIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTE 385
             +    D     D L      +  + +   +  ++  +L +     P   A        
Sbjct: 623 SSVDYESDVRISDDIL------NQVSEVYRKIRNTMRFMLANTTDFDPKAHAVAFEDLRT 676

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKK-TNPD 442
            D+ +L   ++++  IR+   N         VI+   V     Y D  K        N  
Sbjct: 677 VDQYMLVRFNQLVDSIRKAYDNYQFSTVYQGVINFCTVDLSQFYLDFAKDVVYIDQENGF 736

Query: 443 RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +  V  +++ +L  LL   +     +++  L
Sbjct: 737 ERRAMQTVLYDILVKLTKLLSPILVHTTEEVWKYL 771



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R   + G    F  G D HG  I +A
Sbjct: 45  EGKPSFVLHDGPPYANGDVHMGHALNKISKDFIVRSKSMSGFRAPFVPGWDTHGLPIEQA 104

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
             NA                   +  +   N R +   L +  ++D+   T +       
Sbjct: 105 LANAEGVDRKKMSVAEFRKLCAEYAWRQIDNQRTVFKRLGVTGTWDNPYVTLKPEFEAEQ 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             ++ K+++ G IYKG    ++S   E+   + E+  
Sbjct: 165 IRVFGKMAENGYIYKGLKPIYWSPSSESSLAEAEIEY 201


>gi|239993317|ref|ZP_04713841.1| isoleucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 939

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/419 (15%), Positives = 132/419 (31%), Gaps = 36/419 (8%)

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIYKG------CYSGWYSLRDEAYYNDDEVYKG 144
            D+ I T +++ +    + ++        +K           + S+  +    +      
Sbjct: 384 NDEIIETVKEKGNLVLNVKYEHSYPHCWRHKTPIIFRATPQWFVSMDKKGLRAESLEQIK 443

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK------LLSYYESHPEFILPIERRNEVIS 198
                 +   N ++ M E    + +S  +         +                     
Sbjct: 444 QTKWIPDWGQNRIEKMVEGRPDWCISRQRTWGVPIPLYVHKLTGEIHPESAALMEKVAQE 503

Query: 199 FVKSGLKDLSLSRKTFDWGIKIPDDPQ--YIMYVWIDALTNYLTTTGYLDNPDGSKAKFW 256
               G++           G ++ +  +    + VW D+   +       D+   S     
Sbjct: 504 VEAKGIQAWWDLDDAALLGSELDNYEKVTDTLDVWFDSGVTHYFVVDRRDDIPAS----- 558

Query: 257 PADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            ADL++ G D     F +    +  +  + P  + +     +   G K+SKS+GNV+ P 
Sbjct: 559 -ADLYLEGSDQHRGWFMSSLMSSTAMHGHAPYKEVLTHGFTVDAHGRKMSKSVGNVVAPQ 617

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           EV  ++G D LR ++      G+    D+  + KR     A      V  +   +L + +
Sbjct: 618 EVTNKLGADILRLWVASTDYRGEIAVSDE--ILKR-----AADGYRRVRNTARFLLANLN 670

Query: 375 GMIPTPGAFTE----SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS--EVDRYF 428
           G         E     D  I++    + +E+ E   N  +     ++    S      Y 
Sbjct: 671 GFSVEDAVAEEDMVALDRWIVARAKALQEELIEAYDNYDLLVVSQKLTHFCSIELGSFYL 730

Query: 429 DAQKPWEL-KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
           D  K  +   K +     +       +I  L   +       A +I++ L        F
Sbjct: 731 DVIKDRQYTAKADGLARRSCQTAMYHIIEALVRWMAPITSFTAQEIWETLPGERSEFVF 789



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L   D  +  G D HG  I   
Sbjct: 46  KGKKPFILHDGPPYANGDIHIGHAVNKILKDIIVKSKNLSDFDSPYVPGWDCHGLPIELM 105

Query: 62  AQ-------------NAGVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +  +           L +   +D+  +T + +     
Sbjct: 106 VEKKVGKPGKKVTAAEFRQKCREYAQKQIDGQMADFKRLGVFGEWDNPYKTMDFKSEADI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI D G + KG     +     +   + EV  
Sbjct: 166 IRALSKIVDSGHLEKGFKPVHWCTDCGSALAEAEVEY 202


>gi|29348535|ref|NP_812038.1| leucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|48428545|sp|Q8A329|SYL_BACTN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29340440|gb|AAO78232.1| leucyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTKANIDRYREQLDKIGFSFDWSREIRTCEPEYYHWTQWAFQKMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 90/222 (40%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYAEAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VDKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +      T+ +   L    ++++++  +++    + +++  +  V+E+            
Sbjct: 784 LVKDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSVSAFMICVNELSN---------- 830

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +     E++ QL I L  F P +  +++D L 
Sbjct: 831 ----------LKCNKKEILEQLVITLAPFAPHVCEELWDTLG 862


>gi|260441266|ref|ZP_05795082.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291044613|ref|ZP_06570322.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011507|gb|EFE03503.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 103/296 (34%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIRE-NMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +          H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPAINEKAEAELVKKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|255693145|ref|ZP_05416820.1| leucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260621100|gb|EEX43971.1| leucine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNINRYREQLDKIGFSFDWSREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLDAFKAWRPEYATAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +++ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VDKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +      T+ +   L    ++++++  +++    + +++  +  ++E+         + L
Sbjct: 784 LVKDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICINEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL ++L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVVVLAPFAPHVCEELWDVLG 862


>gi|58578735|ref|YP_196947.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417361|emb|CAI26565.1| Valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 812

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 131/377 (34%), Gaps = 19/377 (5%)

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE-EGYFFRL 169
           + + +     +        L ++ +    E+      Q       P    ++ E +   L
Sbjct: 344 EILHNVKCAERSGMPIEILLSNQWFIKVVEIKHELLEQVRKINWYPQSMRKQIEMWIDGL 403

Query: 170 SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ-YIM 228
           +         Y   P  +   +R NE I         +  +        K   +    +M
Sbjct: 404 NWDWCISRQRYFGIPFPVWYSKRDNEEIIIPDVNELPIDPTETLPQGYSKEEVEADVDVM 463

Query: 229 YVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIY--WPAFLLSANLPL 286
             W  +  +    + +            PA L     +I+R  A Y    A+    ++P 
Sbjct: 464 DTWATSSLSPQFNSIHTGINSIPLI---PASLRAQSHEIIRSWAFYTILQAYYHHNSIPW 520

Query: 287 PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGL 346
              + S   +     K+SKS GN + P ++++E G D +RY+       G D  +  + L
Sbjct: 521 ENIMVSGWCLAADKSKMSKSKGNALIPNQLLQEYGADVIRYW-AANSRLGSDTVFSDEVL 579

Query: 347 KKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-SDESILSVCSRVLQEIRENM 405
           +  +   L   + N        + +     IP     TE  D+ +L+   +V+ +  E+ 
Sbjct: 580 Q--LGKRLVTKLWNASKFVSMFVSQ---CQIPDLNCVTETMDKWVLTKLYKVIVKATESF 634

Query: 406 QNQLIHRALAQVISLVS--EVDRYFDAQKPWELKK--TNPDRASTVLYVTVEVIRQLAIL 461
                  AL  + S       D Y +  K     +  TN +  S V  ++  V+  L  +
Sbjct: 635 NVFEYCVALDYIESFFWKDFCDNYLELVKKRAYGESVTNKENLSAVNTLSF-VLMALLKM 693

Query: 462 LQAFVPKLANKIFDILF 478
           L  F+P +  +I+  L+
Sbjct: 694 LAPFMPYITEEIYSTLY 710



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 15/152 (9%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA----- 59
           ++  I T     + Q HIGH +     D +AR+ R+ G DVL+  G D++G         
Sbjct: 38  KQFIIDTPPPTISGQLHIGHVFSYCHTDFIARYQRMLGKDVLYPIGFDDNGLPTERLVEK 97

Query: 60  -KAAQNAGVTTKVFVDQNSR-------NFRDMADVLDISYDD--FIRTTEKRHHDTCRIL 109
            K  + A +  K F    +         F+ +   L ISYD      T  +      ++ 
Sbjct: 98  IKKVRAADIDRKEFKALCNEVSAKFRMEFKILFQSLGISYDWDLEYHTISEEIQKLSQMS 157

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEV 141
           +  + + G IY+     ++   D       EV
Sbjct: 158 FIALYNMGKIYRKLQPIFWDCADRTAIARVEV 189


>gi|328869564|gb|EGG17942.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1082

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 98/264 (37%), Gaps = 11/264 (4%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +       Y         K +PA     G D     F+ +   +  L  
Sbjct: 543 EEVFDCWFESGSMPYAQQHYPFENKDRFEKIFPAHFIAEGIDQTRGWFYTLLVLSTALFD 602

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYD 342
             P    + +   +   G+K+SK L N  DP+ VI++ G DALR +L+       +    
Sbjct: 603 KPPFQNLIVNGLVLASDGKKMSKRLKNYPDPVTVIDKFGSDALRLYLISSPVVRAETLKF 662

Query: 343 KDGLKKRVNADLANGIGNLVSRSVSMIL--------KDYDGMIPTPGAFTESDESILSVC 394
           ++   K +  D+     N     V            K    +     +    D  +L+ C
Sbjct: 663 QENGVKDMLKDVFLPWFNAYRFMVQNAHRHEAATGSKFVPTLEVALASTNIMDRWVLASC 722

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVE 453
             +++ +RE M    ++  + ++   ++E+ + Y    +         D A T L +  E
Sbjct: 723 QSLIKFVREEMAAYRLYTVVPRLTLFINELTNWYVRLNRRRFKGANGEDDAKTSLNILFE 782

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
           V+ ++ + +  F P     ++  L
Sbjct: 783 VLLKVCVAMGPFTPFFTEYMYQNL 806



 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-K 60
           + R +        +    PH GH     I D + R+    G  V    G D HG  I  +
Sbjct: 46  EGRPEYSFYDGPPFATGLPHYGHILAGTIKDTVTRYAHQTGHHVERRFGWDCHGLPIEFE 105

Query: 61  AAQNAGVTTKV--------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
             +  GV TK                     +  +     + +   +D+      RT + 
Sbjct: 106 IDKELGVRTKDDVLKMGIPAYNAACRGIVMRYSTEWEAIVKRLGRWIDMKNTY--RTMDL 163

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
              ++   ++K+++DK  +Y+G     YS+      ++ E
Sbjct: 164 SFMESVWWVFKQLADKDMVYQGFKVMPYSIPCTTPLSNFE 203


>gi|253569100|ref|ZP_04846510.1| leucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251841119|gb|EES69200.1| leucyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTKANIDRYREQLDKIGFSFDWSREIRTCEPEYYHWTQWAFQKMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 90/222 (40%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYAEAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +      T+ +   L    ++++++  +++    + +++  +  V+E+            
Sbjct: 784 LVKDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSVSAFMICVNELSN---------- 830

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +     E++ QL I L  F P +  +++D L 
Sbjct: 831 ----------LKCNKKEILEQLVITLAPFAPHVCEELWDTLG 862


>gi|167752378|ref|ZP_02424505.1| hypothetical protein ALIPUT_00622 [Alistipes putredinis DSM 17216]
 gi|167660619|gb|EDS04749.1| hypothetical protein ALIPUT_00622 [Alistipes putredinis DSM 17216]
          Length = 918

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 3/119 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R K Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D  G    + 
Sbjct: 29  TRPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLCGFNVLHPMGYDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
           A   G    V  ++N   +R+  D +  S+D    +RT +  ++   +  + ++     
Sbjct: 89  AIQTGQHPAVTTERNIARYREQLDKIGFSFDWHREVRTCDPSYYKWTQWAFLEMFKHYY 147



 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 94/222 (42%), Gaps = 38/222 (17%)

Query: 258 ADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L +  +  G+ +    K+SKS+ NV++P  +
Sbjct: 652 VDVNIVRNDILDLDAFRAWRPEFKDAEFILEEGRYVCGWAIE---KMSKSMFNVVNPDYI 708

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++  G D LR + +      +   +D +G+         +G+   + R  ++       +
Sbjct: 709 VDNYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVHKFLRRFWALFYNREGQL 759

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           I T    T+ +   L    + ++++RE+++N   + ++A  +  ++E+            
Sbjct: 760 ILTDEKATDKE---LKTLHKTIKKVREDIENFSFNTSVAAFMICLNEL------------ 804

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
               P R         E++  L +LL  F P +A +++  L 
Sbjct: 805 -GGCPKR---------EILEPLTVLLAPFAPHIAEELWHTLG 836


>gi|225075658|ref|ZP_03718857.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
 gi|224953080|gb|EEG34289.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
          Length = 929

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 105/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++   G K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               R            +  ++S +  +     P   A       E D   L +  ++ +
Sbjct: 641 LAISREILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARQLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVI 455
            +  +       H A+ +++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  +
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKAEAELVKKWTAV 816



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|153807053|ref|ZP_01959721.1| hypothetical protein BACCAC_01330 [Bacteroides caccae ATCC 43185]
 gi|149130173|gb|EDM21383.1| hypothetical protein BACCAC_01330 [Bacteroides caccae ATCC 43185]
          Length = 944

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT +  ++   +  + K+ +   
Sbjct: 88  YAIQTGQHPAITTINNIDRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFLKMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAIE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 921

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 102/264 (38%), Gaps = 18/264 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++             +   +PADL++ G D     F++    + 
Sbjct: 516 FTKENDIMDVWFDSGSSHQGVLV-------ERGMKYPADLYLEGSDQHRGWFNSSLITSV 568

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +     +  +G K+SKSLGNVI P +V+++ G D LR ++   +    D
Sbjct: 569 AINGLAPYKGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMDQYGADILRLWVA-SVDYTAD 627

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTESDESILSVCSR 396
                D LK+   +++   I N   R +   + D+D            E D+ +      
Sbjct: 628 VRISMDMLKQV--SEVYRKIRNTF-RFLHGNITDFDPTKDRVAYAELREMDQYVYMRLQD 684

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKPWELKKTNPDRASTVLYVTVE- 453
           VL+ +R              V + V+      Y D  K     + + ++    +   +  
Sbjct: 685 VLKTVRAAYNRYDFAAVYHVVNNFVAVELSSFYLDIAKDVVYIEGSDNKDRRAMQTVIYD 744

Query: 454 VIRQLAILLQAFVPKLANKIFDIL 477
            +  L  ++   +P   ++++  L
Sbjct: 745 TLMTLVKIMTPIIPHTTDEMWSYL 768



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R +  +     Y N   HIGHA   ++ D++ R   + G  V +  G D HG  I +A
Sbjct: 45  EGRPEYVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIEQA 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
             N GV  K             +  +   N R+    L I  ++++   T +        
Sbjct: 105 LTNKGVKRKEMSVAAFRQLCEEYAYEQIDNQRNQFRRLGIRGNWENPYITLKPEFEARQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++ K+++KG IYKG    ++S   E+   + E+  
Sbjct: 165 EVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEY 200


>gi|228476843|ref|ZP_04061488.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
 gi|228251417|gb|EEK10562.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
          Length = 932

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 108/276 (39%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDTTND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +   +         +  ++  ++ +     PT  A         D+ +   
Sbjct: 631 VRISMDILSQVSES------YRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++ ++ E+   Y D  K     ++       +  TV
Sbjct: 685 FNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        R+    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWDNPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH 201


>gi|301300414|ref|ZP_07206616.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852016|gb|EFK79698.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 931

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 136/421 (32%), Gaps = 31/421 (7%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
           + M       +D   RT +          +  +    D   G  +      D   +    
Sbjct: 388 KQMDYEHSYPFDW--RTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFPD---WGQKR 442

Query: 141 VYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFV 200
           +Y     +          W      F+             E   + +             
Sbjct: 443 LYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEAIMTKETIEHVAKLVEEHGSNIWFQREA 502

Query: 201 KSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADL 260
           K  L +   S  + +       D   IM VW D+ +++                 +PADL
Sbjct: 503 KDLLPEGFTSEHSPNGKFTKETD---IMDVWFDSGSSHQGVCAER------DYLTYPADL 553

Query: 261 HVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIE 318
           ++ G D     F++    +   S + P  + +     +  KG K+SKSLGN I P EVI+
Sbjct: 554 YLEGSDQYRGWFNSSLITSVAYSGHAPYKQILSQGFTLDGKGRKMSKSLGNTIVPSEVID 613

Query: 319 EVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP 378
           ++G + +R +++       D        ++   +            +V  +L +     P
Sbjct: 614 KMGAEIIRLWVLSVDTSA-DVRVSMGSFQQIAES------YRKFRNTVRFLLANTTDFDP 666

Query: 379 TPGA-----FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQ 431
              A         D+ +  + ++  +EI +   N        ++I+ +       Y D  
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 432 KPWELKKT-NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
           K     +  +  +  ++  V  +V+ +L  L+   +P    +I+  L   ++      + 
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYLKEDEKYAQLSEMP 786

Query: 491 Q 491
           +
Sbjct: 787 E 787



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D + R   +      +  G D HG  I + 
Sbjct: 45  EGKPSFVLHDGPPYANGNIHMGHAMNKISKDFIVRSKSMMEFRTPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
            + AGV  K             +  +     R     L +   +D+   T +  +     
Sbjct: 105 LKKAGVDRKALSVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ K+++KG IYKG    ++S   E+   + EV   
Sbjct: 165 RVFGKMAEKGLIYKGKKPVFWSWSSESALAEAEVEYH 201


>gi|189460209|ref|ZP_03008994.1| hypothetical protein BACCOP_00846 [Bacteroides coprocola DSM 17136]
 gi|189433070|gb|EDV02055.1| hypothetical protein BACCOP_00846 [Bacteroides coprocola DSM 17136]
          Length = 944

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 3/124 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGYNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R   D +  S+  D  +RT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTVNNINRYRQQLDKIGFSFDWDREVRTCEPGYYHWTQWAFQKMFNSYY 147

Query: 119 IYKG 122
               
Sbjct: 148 CNTC 151



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 93/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDVLDVEAFKNWRPEYNNAEFILEDGKYICGWAVE---KMSKSMYNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  ++        
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFLKKLWNLFYDRQGNF 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +P  G  T+ +   L    ++++++  +++    + +++  +  V+E             
Sbjct: 784 MPAEGEPTKEE---LKAVHKLIKKVTGDIETFSYNTSISAFMICVNE------------- 827

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   +++      V+  L +++  F P LA ++++ L 
Sbjct: 828 -------LTSLKCRNKAVLSDLIVIIAPFAPHLAEELWEALG 862


>gi|126460254|ref|YP_001056532.1| valyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249975|gb|ABO09066.1| valyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 799

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 115/318 (36%), Gaps = 23/318 (7%)

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQ----- 225
            +      YY +       I+   E +  +  G +     R+     +K           
Sbjct: 394 DWPVSRRRYYATEIPIWWCIKPNGERVPILPKGGEYYVPWRQEPPPEVKEQCKDGVLEGD 453

Query: 226 -YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPAD-LHVIGKDILRFHAIY--WPAFLLS 281
             +   W+D+  +++  +G     +    K +P   +   G DI+R    Y    AFLL 
Sbjct: 454 TRVFDTWMDSSISWMYASGVTKEFNV-FPKVYPHSIMRPQGYDIIRTWLYYSLLRAFLLF 512

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
            ++P      +   +  KGE + KS GNVID +  +E+ G DA+R++       G D  Y
Sbjct: 513 GDIPFKYVRINGMGLDEKGEAMHKSKGNVIDLLAPVEKYGADAVRFWAAAAGKLGSDYRY 572

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           +++ +  R   +    + N+     S              + T  D++IL+    V +  
Sbjct: 573 NENVI--REGKEFVTKVWNIARFVTSF------PKPQGTPSLTPVDKAILAKLYDVAKRA 624

Query: 402 RENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNP---DRASTVLYVTVEVIR 456
                +  ++     + + +     D Y +  K     +      +     +Y    V+ 
Sbjct: 625 IAAYSDFDVYEPAHLLYNFIWHEFADHYIELAKSRAYNRGGEFAKEEQEAAIYTLHTVMA 684

Query: 457 QLAILLQAFVPKLANKIF 474
               LL   +P + +KI+
Sbjct: 685 YSFKLLAPIMPFVTDKIW 702



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 15/145 (10%)

Query: 3   EREKLYISTAIAY-PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           +R    I T   Y  + +PHIG        D++ARF R+ G+DV+F    D +G  I   
Sbjct: 34  DRPVFVIDTPPPYLSSNRPHIGQTASYAHFDMIARFLRMRGVDVVFPFYLDRNGLPIEVQ 93

Query: 62  AQNA-------------GVTTKVFVDQNSRNFRDMADVLDISYDDFIR-TTEKRHHDTCR 107
            +                   K  +D+    F        +S+D + + T    +    +
Sbjct: 94  VEKKYGIVAHEVPREQFIKLCKEELDRYEGEFVSSLRRWGLSFDYWPQGTDSPEYRRMTQ 153

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRD 132
             +  +  +G +Y+      +  R 
Sbjct: 154 KTFIDLWHRGLVYEAERPTPWCPRC 178


>gi|322696499|gb|EFY88290.1| Isoleucyl-tRNA synthetase, putative [Metarhizium acridum CQMa 102]
          Length = 1072

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 15/268 (5%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAK-FWPADLHVIGKDIL--RFHAIYWPAFLLS 281
           + I   W+++      +  Y            +PAD    G D     F+ +      L 
Sbjct: 510 EEIFDCWLESGAMPYASIHYPFENHDEFDGGHFPADFIAEGLDQTRGWFYTLTVLGNKLF 569

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGF 340
              P    + +   +   G+K+SKSL N  DP  + E  G DALR +L+       +   
Sbjct: 570 GKSPFKNVLVNGMVLAEDGKKMSKSLKNFPDPSHIFERYGSDALRLYLINSPVVKAEPLR 629

Query: 341 YDKDGLKKRVNADLANGI--GNLVSRSVSMILK----DY--DGMIPTPGAFTESDESILS 392
           + + G+K+ V+  L          S   ++  K    D+  D    T G     D  +L+
Sbjct: 630 FKESGVKEIVSKVLLPLWNSYRFFSEQAALYKKTTGQDFVADITFSTGGLNNVMDRWVLA 689

Query: 393 VCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYF--DAQKPWELKKTNPDRASTVLY 449
            C  +LQ I + M+   ++  + +++ ++ ++ + Y   + ++            S  L 
Sbjct: 690 ECQSLLQFIEQEMRGYRVYTVVPRLLKMIDDLTNWYIRFNRKRLKGAAGLGEADTSAALN 749

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
             ++V+  L   L  F+P +   I+ +L
Sbjct: 750 TLLQVLFTLVTALAPFIPFITEHIYGLL 777



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 16  PNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA---------- 65
               PH GH     + D++ R+  + G  V+   G D HG  I                 
Sbjct: 32  VTGLPHYGHFLTGTLKDIIPRYWSMKGYHVVRRFGWDTHGVPIEYQIDKKFGVSGPDAVR 91

Query: 66  -------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDK 116
                      K  V   +++++ + + L   +  D+  +  +    +T   ++ ++ DK
Sbjct: 92  QMGIDKYNAECKAIVMTYAQDWKQIMERLGRWVDMDNDYKAMDPSFMETVWWVFSQLFDK 151

Query: 117 GDIYK 121
             +Y+
Sbjct: 152 DQVYR 156


>gi|326915110|ref|XP_003203864.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 117/366 (31%), Gaps = 43/366 (11%)

Query: 138 DDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVI 197
           D   +     Q       PV + ++ G     S     ++   E             +  
Sbjct: 430 DRRTFWCISRQRCWGVPIPVFYQKDTGESLINSETITDIIKIVEQQGTDAWWTLPIEQ-- 487

Query: 198 SFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                 L       K     +      Q ++ +W D+ T++       +           
Sbjct: 488 ------LLSKEAVAKAGGHDVLDYVKGQDVLDIWFDSGTSWAHVLEGTEQR--------- 532

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           AD+++ GKD L   F +    +       P    +     +  KGEK+SKS+GNV+DP  
Sbjct: 533 ADVYLEGKDQLGGWFQSSLLTSVATRKKAPYKTLIVHGFTLGEKGEKMSKSIGNVVDPDV 592

Query: 316 V---------IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSV 366
           V             G D LR+++              + L   V  + A    N +  ++
Sbjct: 593 VINGGDDHTKDPPYGADVLRWWVAESNVFT-------EVLIGPVVLNAARDDINKLRNTL 645

Query: 367 SMILKDYDGMIPT-----PGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV 421
             +L +  G  P      P      D+ +L +      ++ E  +     + +  + +  
Sbjct: 646 RFMLGNMAGFNPETDSIPPSEMYIVDQYMLHLLQDYGSKVTEAYKQYDYSKVVRLLQAFC 705

Query: 422 SE--VDRYFDAQKPWELKKTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           S    + YF   K     +   D +  +   V  E +  +       +P LA ++F  L 
Sbjct: 706 SRNLSNFYFSIIKDRLYCEEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLP 765

Query: 479 VADENR 484
              ++ 
Sbjct: 766 YKKDSE 771



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 14/160 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +++  +     Y N  PH+GHA   I+ D+  RFH + G  V +  G D HG  I   
Sbjct: 20  KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYVPGWDCHGLPIELK 79

Query: 62  ------------AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCR 107
                               K F ++     +       I  D  +   T + ++     
Sbjct: 80  ALSEIKGAENLSPVEIRQKAKEFAERAIEKQKAAFIRWGIMADWANCYCTFDPKYEANQL 139

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
            ++ K+ DKG IY+     ++S   +    + E+      
Sbjct: 140 RVFHKMYDKGFIYQDYKPVFWSPSAKTALAEAELEYNEQH 179


>gi|307127869|ref|YP_003879900.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484931|gb|ADM91800.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332072827|gb|EGI83308.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|54020648|ref|YP_116175.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987821|gb|AAV28022.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 755

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 75/196 (38%), Gaps = 4/196 (2%)

Query: 12  AIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTK 70
              YP+A   H+GH      +D++ARF RL+G DVL   G D  G    + A   G    
Sbjct: 1   MFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFGLPAEQYAIKTGNHPG 60

Query: 71  VFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
            F  +N  NF+        SY  D  I T++   +   + ++K +              +
Sbjct: 61  EFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANLAEIREVEVNW 120

Query: 129 SLRDEAYYNDDEVYKGADGQYYNAQHN-PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFI 187
                    ++E+ +  +G   + + N PV   + + +  +++ Y  KLL   +      
Sbjct: 121 CPELGTVLANEELKREKNGALVSERGNFPVILKKMKQWVLKITEYAQKLLDGLDQVDFPD 180

Query: 188 LPIERRNEVISFVKSG 203
                + + I   K  
Sbjct: 181 SLKALQKKWIGKSKGW 196



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 126/373 (33%), Gaps = 54/373 (14%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                Q Y  +  PV + E+   +      +           +   P+    + + F K+
Sbjct: 367 WVFSRQRYWGEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKDWVFFEKN 426

Query: 203 GLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV 262
           G      +     W         +I+      L                  K+ P DL++
Sbjct: 427 GKYYRRETNTMPQWSGSSWYYLAFILKEKDKYL------PLDSKIAYDKFKKWLPVDLYI 480

Query: 263 IGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI 314
            G++    H IY   +         +  + P  K +     +   G+K+SKS GN I+P 
Sbjct: 481 GGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKIIHQGMLLGSDGQKMSKSKGNTINPT 540

Query: 315 EVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYD 374
           E+I++ G D +R FL+     G    +D++G+           I N + R    IL +Y+
Sbjct: 541 EMIDKFGADTIRIFLMFMGPIGDLRLWDENGVVS---------IFNWIQRVQRTILANYE 591

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                     E D       +  + EI   ++    + A+++++  ++ +++        
Sbjct: 592 I-----DPELEKDYEFTYFFNNFVFEITNLIETFKFNVAISKLMIYINFLNK-------- 638

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
                       +       +    I+   F P  A ++ + L         + L+ ++ 
Sbjct: 639 ---------KQKIPS--KNYLTDFLIIFSVFAPHTAEELLEKLGQ-------KPLNFQIW 680

Query: 495 PGFMLHKTFDPIF 507
           P F   K F   F
Sbjct: 681 PQFDRSKIFKNTF 693


>gi|194333348|ref|YP_002015208.1| leucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|229559999|sp|B4S5G4|SYL_PROA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194311166|gb|ACF45561.1| leucyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 806

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 11/218 (5%)

Query: 3   EREKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH       D++AR+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGTGLHVGHLEGYTATDIIARYKRSRGFNVLHPMGWDAFGLPAEQF 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G        +N  +FR     +  SYD    I TT+  +    + ++ ++ DKG  
Sbjct: 89  AIKTGTHPTTTTQKNVSSFRQTLQNMGFSYDWSREINTTDPNYFRWTQWIFLQLLDKGLA 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y       +         ++EV +        A  + V       +  +++AY ++LL  
Sbjct: 149 YMSEVDVNWCEDLRVVLANEEVDEKI------AAGHTVVRKPLRQWVLKITAYAERLLGD 202

Query: 180 YE--SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
            +    PE +  ++R     S       +L   R+   
Sbjct: 203 LDELDWPENVKQMQRNWIGRSEGVEIDFELPCHRQKLT 240



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 97/265 (36%), Gaps = 43/265 (16%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPD---GSKAKFW-PADLHVIGKDILRFHAIYWPAFL 279
               M  W  +   YL      +        K ++W   DL++ G +    H +Y   + 
Sbjct: 486 ETNTMPQWAGSCWYYLRFIDPSNQQQLVDPDKERYWMNVDLYIGGAEHAVLHLLYARFWH 545

Query: 280 --------LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
                   +S   P  K       +    EK+SKS GNVI    V++  G DA+R + + 
Sbjct: 546 KVLYDLGVVSTKEPFQKLFNQGMILGEDNEKMSKSRGNVIPADHVMQSYGADAVRLYEMF 605

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESIL 391
                +   ++ +G++         GI   +SR   ++    +   P     T  D+++ 
Sbjct: 606 LGPLEQVKPWNTNGIE---------GISRFLSRVWRIV--YPEQEGPAMLTDTPLDDALT 654

Query: 392 SVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
               + ++++ E+ ++   + A+A+++  V+E                            
Sbjct: 655 RRMHKTIKKVTEDTEHLKFNTAIAEMMVFVNE--------------------LHKAGCRN 694

Query: 452 VEVIRQLAILLQAFVPKLANKIFDI 476
            + +  L +LL  + P +  +++  
Sbjct: 695 RKALETLLLLLAPYAPHICEELWQA 719


>gi|326693770|ref|ZP_08230775.1| isoleucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/308 (18%), Positives = 118/308 (38%), Gaps = 27/308 (8%)

Query: 194 NEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKA 253
           N         L     + +    GI      + IM VW D+ ++      +    D  + 
Sbjct: 495 NYWFEHEAKDLLPEGYTNEHSPNGI--FTKEEDIMDVWFDSGSS------WAGVMDTREH 546

Query: 254 KFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVI 311
             +PADL++ G D     F++    +   + + P    +     +  KG K+SKSLGN I
Sbjct: 547 LDYPADLYLEGSDQYRGWFNSSLITSVAATGHAPYKNVLSQGFTLDGKGNKMSKSLGNTI 606

Query: 312 DPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILK 371
            P++V +++G++ LR + +      +D     + LK+   +         +  ++  ++ 
Sbjct: 607 SPLDVADQMGIEILRLWTISVDTS-QDMPVSNEILKQVSES------YRKLRNTLRFLMA 659

Query: 372 DYDGMIPTPGAFTESDES-----ILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEV 424
           +         A   +D +        + +  +++IR    N   +    ++I+   V   
Sbjct: 660 NTSDFNYATDAVPFADRAGHDQYFSVLLNNFVKDIRGYYDNYQFNDIFKRMINFVNVDLS 719

Query: 425 DRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             Y D  K     +     A  ++  V  E +  L  L+   +P  A ++++ L   +E 
Sbjct: 720 AFYLDIAKDVVYVEAPTGHARRSMQTVFYETLLALTKLMLPILPHTAEEVWEYL--PNET 777

Query: 484 RCFQSLDQ 491
             F  L +
Sbjct: 778 AAFAYLSE 785



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 45  ETKPHFNLHDGPPYANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQ 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
              AG               K F  +     R     L I  D      T +        
Sbjct: 105 LTKAGHDRKSMPKAAWRDLAKAFALEQVDKQRQDFKRLGIMADWENPYITLQPEFEAAQV 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ +++ KG I+KG    ++S   E+   + E+             N V
Sbjct: 165 RVFGEMAGKGYIFKGSKPVYWSWSSESALAEAEIEYHDIDSTSLYYANRV 214


>gi|241895883|ref|ZP_04783179.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870926|gb|EER74677.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 804

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 9/190 (4%)

Query: 1   MKEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           + ++EK +      +P+ Q  H+GH       D+++R  R+ G +VL   G D  G    
Sbjct: 27  VSDKEKFFAMDMFPFPSGQGLHVGHPEGYTATDIVSRMKRMQGYNVLHPMGFDAFGLPTE 86

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKG 117
           + A   G   K    +N + FR     L +SYD    + TT+ +++   + +++++  KG
Sbjct: 87  EYAIKTGEDPKTVTAKNVKTFRHQMKSLGLSYDWSREVNTTDPKYYKWTQWIFEQLYKKG 146

Query: 118 DIYKGCYSGWY--SLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDK 175
             Y+      +           ++E+  G           PV  +    +  +++AY D+
Sbjct: 147 LAYEDEIMVNWAPDYNGGTVVANEEIIDGKT----ERGGYPVYRVPMRQWALKITAYADR 202

Query: 176 LLSYYESHPE 185
           L+   +    
Sbjct: 203 LIDDLDDLDW 212



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 145/427 (33%), Gaps = 62/427 (14%)

Query: 95  IRTTEKRHHDTCRIL---WKKISDKGDIYKGCYSGWYSLRDEAYYN----DDEVYKGADG 147
           +   + R +D  +      + + + GD+ K  Y+G     +  + +    ++ + K  D 
Sbjct: 340 VAAHDTRDYDFAKKYDLPIRPVIEGGDVTKEAYTGDGKHINSGFLDGLGKEEAITKMIDW 399

Query: 148 QYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHP-----------EFILPIERRNEV 196
              +   +         + F    Y  + +                     LP       
Sbjct: 400 LEEHHAGHKKVNYRLRDWIFSRQRYWGEPIPVIHWEDGEQTLVPESELPLRLPEVDNIMP 459

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNP----DGSK 252
               +S L ++       D   +        M  W  +   YL      ++       ++
Sbjct: 460 SGTGESPLVNVDDWVNVVDENGRKGKRETNTMPQWAGSSWYYLRYMDPHNDQEIVSPEAE 519

Query: 253 AKFWPADLHVIGKDILRFHAIYWPAFL--------LSANLPLPKKVFSHGFILHKGEKIS 304
           A +   DL++ G +    H +Y   +         +    P  +       +    EK+S
Sbjct: 520 AYWQNVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQRLANQGMILGENHEKMS 579

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           KS GNV++P +V+EE G D LR + +      +   + ++GL               + R
Sbjct: 580 KSKGNVVNPDDVVEEYGADTLRLYEMFMGPLDQSIAWSEEGLAGSR---------RWLER 630

Query: 365 SVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV 424
              + + D D +       T +D  +  + +  ++++ E+ +N   + A++Q++  V+E 
Sbjct: 631 VWRLFIDDDDKLRDHIT--TINDHKLDKIYNETVKKVTEDYENLRFNTAISQMMIFVNEA 688

Query: 425 DRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENR 484
                        K +         ++V+ +     LL    P +  +++  L  ADE+ 
Sbjct: 689 ------------YKQD--------SLSVQYVEGFIKLLNPIAPHMTEELWSFLH-ADESV 727

Query: 485 CFQSLDQ 491
            +     
Sbjct: 728 AYAEWPT 734


>gi|325127582|gb|EGC50505.1| isoleucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 929

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 105/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE---- 400
               +            +  ++S +  +     P   A  ++D   +   + VL      
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLARQLQE 700

Query: 401 --IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVI 455
               +       H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYSRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELVKKWTAI 816



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDRPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGLEGKAFAVIWTTTPWTLPA 246


>gi|298386935|ref|ZP_06996489.1| leucine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298260085|gb|EFI02955.1| leucine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 944

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  ESKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +    N   +R+  D +  S+D    IRT E  ++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPAITTKANIDRYREQLDKIGFSFDWSREIRTCEPEYYHWTQWAFQKMFNSYY 147

Query: 119 I 119
            
Sbjct: 148 C 148



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 90/222 (40%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYAEAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           +      T+ +   L    ++++++  +++    + +++  +  V+E+            
Sbjct: 784 LVKDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSVSAFMICVNELSN---------- 830

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                     +     E++ QL I L  F P +  +++D L 
Sbjct: 831 ----------LKCNKKEILEQLVITLAPFAPHVCEELWDTLG 862


>gi|17546537|ref|NP_519939.1| methionyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|17428835|emb|CAD15520.1| probable methionyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 496

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 81/525 (15%), Positives = 153/525 (29%), Gaps = 69/525 (13%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           MK R+   +   +  PN   H+GH A   +  D+LAR  R +G  V   + TD +   + 
Sbjct: 1   MKARKTYVLIPVMPTPNGPLHLGHIAGPFLKMDMLARHLRRNGNTVALVSATDPYETHVL 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFI----RTTEKRHHDTCRILWKKISD 115
             A       +    +N R        LDI YD FI         R +   R +   +  
Sbjct: 61  PRADEQNKPVEQICAENHRAIHRCLQALDIRYDAFIDPLASPYRARLNGITREVLDDLHA 120

Query: 116 KGDIYKGCYSGWYSLRDEAYY-------NDDEVYKGADGQYYNAQHNPVQWMEEEGYFFR 168
           +G ++        S R                      G +       V   +       
Sbjct: 121 QGRLHARNEPVHISRRTGRMLVGSRIVGTCPCCGVEMGGYHCEGCGMEVSPRDLIAPRAE 180

Query: 169 LSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP-DDPQYI 227
            +    ++ +      +  LP  +R  ++             R     G  +   +P   
Sbjct: 181 PADDTVEVEARASVFVDADLPALQR-RMLEARVPADVRRIAERFMHAAGSAVRLSNPGEW 239

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRF----HAIYWPAFLLSAN 283
             +W + L    +                 A   ++  D   F     A+   +F     
Sbjct: 240 GEIWPNTLATAPSVVFSYTALFMLSVLCGEAAREILALDHNPFDRRSDALIVTSFGFDNT 299

Query: 284 LPL----------------PKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV--DAL 325
           +P                   +  ++ F    G K S S  + I   + + E+GV  D L
Sbjct: 300 VPFCVGVETLAQHSRRYRGFDRCLTNFFYTLDGRKFSTSRQHCIWADQAVRELGVASDVL 359

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
           RYFL +         + +DG                +   ++ +    +  I    A   
Sbjct: 360 RYFLAKTSPESGPSDFSRDGFDA---------FRRAIEPRLAQMKAAVESGIGGDAAVPY 410

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRAS 445
           +D       +R++ ++            L      +   D++     PW+          
Sbjct: 411 AD-----TLARLVADMDAAFDVDHFS--LRAATRCI---DQWLAL--PWQ---------- 448

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
                    +R   +L    +P+LA+ ++  L      R   + +
Sbjct: 449 --PAHAAAYVRGFCMLAYPVMPELASTLWSQLGHEGLPRYLAATE 491


>gi|258405242|ref|YP_003197984.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797469|gb|ACV68406.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 938

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 125/396 (31%), Gaps = 19/396 (4%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQY 149
           SY    R  +          +  +   G   K   +    ++    +  + ++     + 
Sbjct: 399 SYPHCWRCKKPVIFRATTQWFISMEANGLRDKALKAIDSEVQWIPSWGRERIHSMIANRP 458

Query: 150 YNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSL 209
                    W             +    + +            R     F  S    +  
Sbjct: 459 DWCISRQRMWGVPIIALLCEGCGEAYYEADWVHAIVDRFAEHERGADYWFEASLEDIVPE 518

Query: 210 SRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL- 268
                  G         I+ VW D+ T+      +    +      +PADL++ G D   
Sbjct: 519 GLTCPSCGGTHWAKEDDILDVWFDSGTS------FAAVVEQRDECRYPADLYLEGTDQHR 572

Query: 269 -RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             FH+    +       P    +     +  +G K+SKS+GNV+ P E++++ G + LR 
Sbjct: 573 GWFHSSLLASVGTRDQAPYKTVLTHGFVVDGQGRKMSKSIGNVVAPQEIMDKYGAEILRM 632

Query: 328 FLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP--TPGAFTE 385
           ++  E    +D    ++ LK+ V  D    I N   R +   L D+D             
Sbjct: 633 WVASENYQ-EDLRISENILKQLV--DAYRRIRNTC-RFILGNLADFDPSQNGLPLDEVLS 688

Query: 386 SDESILSVCSRVLQEIRENMQNQLIHRALAQV--ISLVSEVDRYFDAQKPWELKKTNPD- 442
            D   L +     Q ++E       H+    +  + +      Y D  K   L  + P  
Sbjct: 689 FDRYALDLIQTRHQRMQEAYSRYEFHKVFHTLHHMCVTDLSAFYLDILKD-RLYVSAPGS 747

Query: 443 -RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
               +   V   +++ L   +  F+   A ++F  L
Sbjct: 748 IERRSAQTVLHRILQMLLRDMAPFLSFTAEELFQHL 783



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 15/157 (9%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           +R    +     Y N   H+G A   ++ D++ ++  + G +  +  G D HG  I    
Sbjct: 47  DRPPFVLHDGPPYANGNIHLGTAMNKVLKDMIVKYKNMQGHNAEYVPGWDCHGLPIELKV 106

Query: 63  QNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
           +    + K              +  +     R+    L +  ++D    T    +     
Sbjct: 107 ERELGSDKKSMSILDIRKQCREYALKYLDIQREEFKKLGVLGTWDAPYLTMNPSYEAATA 166

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
               +  ++G + +     ++    E    + EV  G
Sbjct: 167 RELARFMERGSVVRNKKPIYWCCSCETALAEAEVEYG 203


>gi|254785207|ref|YP_003072635.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511519|sp|C5BQX2|SYI_TERTT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|237684439|gb|ACR11703.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 934

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 99/274 (36%), Gaps = 17/274 (6%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           + VW D+   + +           +   +PADL++ G D     F +    A  ++   P
Sbjct: 530 LDVWFDSGVTHYSVIQ------QREELQYPADLYLEGSDQHRGWFQSSLKTAIAINGTAP 583

Query: 286 LPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDG 345
             + +     +   G+K+SKS+GN + P +V+ E+G D LR ++        D     + 
Sbjct: 584 YKQVLTHGFTVDANGKKMSKSIGNTVSPQKVMNELGADVLRLWVAATD-FSGDMSVSDEI 642

Query: 346 LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRE 403
           L +   AD    I N +   +S  L  +D  I +         D   +   +++ ++I  
Sbjct: 643 LMR--TADSYRRIRNTMRYFMS-NLNGFDPAINSVAFDDMVALDRWAVDRAAKLQRDIVA 699

Query: 404 NMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI-RQLAI 460
              +   H    ++ +   V     Y D  K          RA         +I + L  
Sbjct: 700 CYDSYQFHTIYQKIHNFCIVDMGGFYLDIIKDRVYTMQEDSRARRSAQTAQYLIVQALVR 759

Query: 461 LLQAFVPKLANKIFDILFVADENRCFQSLDQRLK 494
            +   +   A++I+  L        F +    L 
Sbjct: 760 WIAPILSFTADEIWQALPGEKTGPVFVAEWLELP 793



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 16/141 (11%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            REK  +     Y N + HIGHA   I+ D++ +   L G D  +  G D HG  I    
Sbjct: 47  GREKFILHDGPPYANGEIHIGHAVNKILKDIIVKAKTLSGFDAPYIPGWDCHGLPIEHNV 106

Query: 63  QNA-------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTE-KRHHDTC 106
           +                   + +  +     ++    L +   +D    T + K   D  
Sbjct: 107 EKKVGKAGVKVDFATFRKKCREYAAKQVAGQKEGFVRLGVLADWDKPYLTMDYKTEADIV 166

Query: 107 RILWKKISDKGDIYKGCYSGW 127
           R L K +++   +       W
Sbjct: 167 RALGKIVANGHLVRGFKPVYW 187


>gi|169832458|ref|YP_001695040.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|254782442|sp|B1I721|SYI_STRPI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|168994960|gb|ACA35572.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|290994673|ref|XP_002679956.1| isoleucyl-tRNA synthetase [Naegleria gruberi]
 gi|284093575|gb|EFC47212.1| isoleucyl-tRNA synthetase [Naegleria gruberi]
          Length = 1087

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 78/458 (17%), Positives = 152/458 (33%), Gaps = 45/458 (9%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKV---FVDQNSRNFRDMADVLDISYDDFI--RTTEKRH 102
               D+ G+ ++      G+  K     + ++ R+   +     I++      R+     
Sbjct: 360 PCPLDDIGRYVSPIETFKGMYIKDADPLIIEDLRSRLRLFKKEGITHKYPFCWRSDTPLI 419

Query: 103 HDTCRILWKKISDKGDI----YKGCYSGWYSLRDEAYYND--DEVYKGADGQYYNAQHNP 156
           + T    + +++D  D      K  Y     +++  ++N   D          Y     P
Sbjct: 420 YKTVPSWFVRVTDLRDRLLENNKQTYWVPEHVQEGRFHNWLADCKDWTISRSRYWGTPIP 479

Query: 157 VQWMEEEGYFFRL--SAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTF 214
           V WM E+G       S  + + L+              +  + S    G           
Sbjct: 480 V-WMSEDGEEMVAVGSVAELEQLTGITGINNLHRQHIDKLTIPSQKVPG----------- 527

Query: 215 DWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHA 272
               K+      +   W ++ +       Y           +PAD    G D     F+ 
Sbjct: 528 ----KVLKRVSDVFDCWFESGSMPYAQNHYPFENPEKFQDSFPADFIAEGLDQTRGWFYT 583

Query: 273 IYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVRE 332
           +      L    P    + +   +   G K+SKS  N  DP  VI++ G DALR +L+  
Sbjct: 584 LLVLGTALFDKCPFQNVIVNGLVLAEDGSKMSKSKKNYPDPQIVIDKHGSDALRLYLINS 643

Query: 333 IA-------CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE 385
                      +DG +D          +        V R V    +D++  I        
Sbjct: 644 PVVRAEPLKFKEDGVFDVVKEILLQWYNAYRFFVQSVKRYVDETGEDFNSDIANAAKIDN 703

Query: 386 S-DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKK-----T 439
             D+ I+S  + +L+ I   M+   ++    ++   +  + R++       LK      T
Sbjct: 704 IMDKWIISSSNSLLKNISAEMKAYRLYNVTPKLEGFIDHLTRWYVKINNKRLKGEQKDQT 763

Query: 440 NPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
             DR S +  + +  +  +  ++  F P L  K++  L
Sbjct: 764 KEDRLSALSAMFI-ALYNVVRIMAPFTPFLTEKMYQNL 800



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 27/171 (15%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++         +     PH GH     I DV+ R+    G  V    G D HG  I  
Sbjct: 38  EGKKPFSFYDGPPFATGYLPHYGHILAGTIKDVVTRYAHQTGHYVERRFGWDCHGLPIEF 97

Query: 61  AAQNAGVTTKVF------------------------VDQNSRNFRDMADVLD--ISYDDF 94
             +      K+F                        V + S  +  +   L   I + + 
Sbjct: 98  EIEKILKRDKIFEEKLFRADIEEYGIARYNDKCESIVMKYSSEWEQIITRLGRWIDFKND 157

Query: 95  IRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGA 145
            +T      ++   ++K++ DK  +YKG     YS       ++ EV +G 
Sbjct: 158 YKTMNFSFMESVWWVFKQLWDKNLVYKGVRVMPYSTGCTTPLSNFEVTQGY 208


>gi|255528315|ref|ZP_05395125.1| leucyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255507985|gb|EET84415.1| leucyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 812

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 70/200 (35%), Gaps = 7/200 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           EKLY     +YP+  + H GH +     D  AR  R+ G +V    G D  G      A 
Sbjct: 31  EKLYTLEMFSYPSGSKLHAGHWFNYGPVDSWARMKRMQGFNVFQPMGFDAFGLPAENYAI 90

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+  K    +N          +    ++++ + T    ++   + ++ K+ +KG  Y+
Sbjct: 91  KTGIHPKDSTLKNIETMEKQLRAMGAMFNWENEVITCLPDYYKWTQWVFLKLYEKGLAYR 150

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +         +++V  G            V       +F +++ Y D+LL   +
Sbjct: 151 SEAPVNWCPSCNTVLANEQVVDGT----CERCSTEVIKKNLTQWFLKITDYADELLQDLD 206

Query: 182 SHPEFILPIERRNEVISFVK 201
                      +   I   K
Sbjct: 207 KLDWPEKTKAMQRHWIGKSK 226



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 110/312 (35%), Gaps = 37/312 (11%)

Query: 197 ISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSKA-- 253
           + F   G   LS S +  +        P           + +      Y DN +  KA  
Sbjct: 451 VEFSPDGKSPLSKSPEFVNTTCPKCGGPAKREADTLDTFVCSSWYYLRYPDNKNSEKAFD 510

Query: 254 -----KFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHKG 300
                +  P D++V G +    H +Y             L+ + P          +   G
Sbjct: 511 TEKINRLLPVDMYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLRHQGLILGPDG 570

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
            K+SKS GN I P + I+E G D  R +L+      + G +  DG+K            +
Sbjct: 571 LKMSKSKGNTISPDDYIKEFGSDVFRMYLMFGFDYSEGGAWSDDGIKS------IGRFVD 624

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R ++   +  +       +  ++++++  V    ++ I E+      + ++A+++  
Sbjct: 625 RIERILTSCREVINNSENDKTSLDKAEKALNYVRHFSIKSISEDASKFQFNTSIARLMEY 684

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDI--LF 478
            + + +Y              D  +       +VI     LL  F P  A + +++  + 
Sbjct: 685 TNALSKYLSE-----------DVKNAAF--LKDVIVDFIKLLAPFAPHFAEEQWNLTGMN 731

Query: 479 VADENRCFQSLD 490
            +  N  +   D
Sbjct: 732 FSIFNEKWPEFD 743


>gi|319401513|gb|EFV89723.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 916

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LVDMTKLLAPILVHTAEEVWSH 770



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|225861487|ref|YP_002742996.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|254782446|sp|C1CSS4|SYI_STRZT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225727306|gb|ACO23157.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|327389845|gb|EGE88190.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|57866707|ref|YP_188341.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|81819412|sp|Q5HPZ9|SYI_STAEQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57637365|gb|AAW54153.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 916

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LVDMTKLLAPILVHTAEEVWSH 770



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|325571365|ref|ZP_08146865.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325155841|gb|EGC68037.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 931

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 103/271 (38%), Gaps = 24/271 (8%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLL 280
               IM VW D+ +++                 +PAD+++ G D     F++    +  +
Sbjct: 518 KETDIMDVWFDSGSSHEAVLRQRP------ELTFPADMYLEGSDQYRGWFNSSITTSVAI 571

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +   P    +     +  +G K+SKSLGN I P +VI ++G D LR ++   +    D  
Sbjct: 572 NEVAPYKAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMGADILRLWV-SSVDYEADVR 630

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSVCS 395
              D L      +  + +   +  ++  +L +     P   +         D+ ++   +
Sbjct: 631 VSMDIL------NQVSEVYRKIRNTMRFLLANTSDFDPAKDSVPFENLRSVDKYMMVRLN 684

Query: 396 RVLQEIREN-MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD-RASTVLYVT 451
           + ++ IRE+  +          VI+   V     Y D  K     +   D +   +  V 
Sbjct: 685 QTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEAENDFQRRAMQTVF 744

Query: 452 VEVIRQLAILLQAFVPKLANKIFDILFVADE 482
            +    L  LL   +P  A +I+  L   +E
Sbjct: 745 YQTAVALTKLLTPIIPHTAEEIWSHLKEEEE 775



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 14/170 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   HIGH+   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPTFVLHDGPPYANGNIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIEQV 104

Query: 62  AQNA------------GVTTKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
             N                 + +        R     L +S  +D    T    +     
Sbjct: 105 LTNKGIKRKEMSLAEYRKKCEEYALTQVDTQRADFKRLGVSGDWDHPYITLTPDYEAAEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
            ++ K+++KG IYKG    ++S   E+   + E+              PV
Sbjct: 165 RVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYKDVKSPSIYVAFPV 214


>gi|291514941|emb|CBK64151.1| leucyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 918

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 5/191 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            R K Y+     YP+    H+GH    I +D+ +R+ RL G +VL   G D  G    + 
Sbjct: 29  SRPKFYVLDMFPYPSGAGLHVGHPLGYIASDIYSRYKRLKGFNVLHPMGYDAFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    V  +QN   +R+  D +  S+  D  +RT +  ++   +  +  +      
Sbjct: 89  AIQTGQHPAVTTEQNIARYREQLDKIGFSFDWDREVRTCDPGYYKWTQWAF--LEMFSHW 146

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y         + +     +    +G D       H        +    +    Q+  L++
Sbjct: 147 YDRSKQQARPVAELTAAFETSGTEGLDAACTTEMHFTAAEWNAKSEREKEQILQNYRLAF 206

Query: 180 YESHPEFILPI 190
                    P 
Sbjct: 207 RADTQVNWCPK 217



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 38/225 (16%)

Query: 258 ADLHVIGKDILRFHAIY-WPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W      A   L    +  G+ +    K+SKS  NV++P  +
Sbjct: 652 VDVNIVRNDILDLDAFRAWMPEYKDAEFILEDGKYVCGWAIE---KMSKSFYNVVNPDYI 708

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           ++  G D LR + +      +   +D +G+         +G+   + R   +       +
Sbjct: 709 VDNYGADTLRMYEMFLGPLEQSKPWDTNGI---------DGVHKFLRRFWRLFFDRDGQL 759

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
             T    TE +   L    + ++++ E+++N   + ++A  +  ++E+            
Sbjct: 760 CVTDEKATEQE---LRTLHKTIKKVSEDIENFSFNTSVAAFMICLNEL------------ 804

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                 R         EV+  L +LL  F P +A +++  L   +
Sbjct: 805 -GECSKR---------EVLEPLTVLLAPFAPHIAEELWAALGHTE 839


>gi|296313351|ref|ZP_06863292.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840168|gb|EFH24106.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 929

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 106/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELK-KTNPDRASTVLYVTVEVI 455
            +  +       H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSRARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L + +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKAEAELVQKWTAI 816



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDRPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|254804338|ref|YP_003082559.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667880|emb|CBA03973.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 929

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 106/296 (35%), Gaps = 30/296 (10%)

Query: 228 MYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLP 285
           M VW D+ + + +           +   WPADL++ G D     F +        S    
Sbjct: 534 MDVWFDSGSTHYSVVK------QREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRA 587

Query: 286 LPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
             K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +            Y  +
Sbjct: 588 PYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS-------TDYSGE 640

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFT-----ESDESILSVCSRVLQ 399
               +            +  ++S +  +     P   A       E D   L +  R+ +
Sbjct: 641 LAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRYALVLARRLQE 700

Query: 400 EIR-ENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRASTVLYVTVEVI 455
            +  +       H A+  ++S  SE     Y D  K      K +     +       + 
Sbjct: 701 RLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHIT 760

Query: 456 RQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLHKTFDPI 506
           R L +L+   +     + +DI+   +E+               K    L K +  I
Sbjct: 761 RSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELVKKWTAI 816



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDKPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
             +I   G +Y+G     + L   +   + EV  
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEY 199


>gi|123965505|ref|YP_001010586.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229755|sp|A2BUL8|SYI_PROM5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123199871|gb|ABM71479.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 965

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/431 (15%), Positives = 133/431 (30%), Gaps = 41/431 (9%)

Query: 96  RTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHN 155
           RT +          +  +                +          +Y    G+       
Sbjct: 429 RTKKPTIFRATEQWFASVEGFRSSALKAIEDVEWMPKT---GKKRIYSMVVGRGDWCISR 485

Query: 156 PVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD 215
              W      F+     +  L S   +H + +      +    + +  L       ++  
Sbjct: 486 QRSWGVPIPVFYEKKGKEILLNSETINHIQKLFNEHGADIWWDWDEKDLLPKQYKEESDR 545

Query: 216 WGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
           W           M VW D+ ++      +    +  +   +PADL++ G D     F + 
Sbjct: 546 W-----IKGLDTMDVWFDSGSS------WAAVCEQREELAYPADLYLEGSDQHRGWFQSS 594

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPI---------EVIEEVGVDA 324
              +  ++   P  K +     +   G K+SKSLGNV+DP          ++    G D 
Sbjct: 595 LLTSVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGSNQKIQPAYGADV 654

Query: 325 LRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-- 382
           LR ++           Y  D           + +   V  +   +L +     P      
Sbjct: 655 LRLWVSS-------VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPIDEEID 707

Query: 383 ---FTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELK 437
                  D+ +L+    V  +I    +N    +    + S   V   + Y D  K     
Sbjct: 708 IDQLPILDQWMLNRLVDVSDQITIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 438 KTNPD-RASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA-DENRCFQSLDQRLKP 495
                 R  T  +V  +++  LA+L+   +  +A  I+  +  + +E   F+     L  
Sbjct: 768 SAKSSIRRRTCQFVMSKIVENLAVLISPVLCHMAEDIWQNIPYSTNEKSVFERGWPNLPK 827

Query: 496 GFMLHKTFDPI 506
            ++  +  + I
Sbjct: 828 SWINPELNERI 838



 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 16/160 (10%)

Query: 5   EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           EK  +     Y N   H+GHA   ++ D++ ++  L G  V F  G D HG  I      
Sbjct: 59  EKFTLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHFVPGWDCHGLPIELKVLQ 118

Query: 65  AGVTTK--------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
           +  + +               +     +N  +      I   +D+   T +  +      
Sbjct: 119 SLKSHERKDLDSLGLRKKATDYAKIQIKNQLEGFKRWGIWGDWDNPYLTLKNNYESAQIG 178

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
           ++ K+   G IY+G     +S        + E+    +  
Sbjct: 179 VFGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPEEHY 218


>gi|262282734|ref|ZP_06060502.1| isoleucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262025|gb|EEY80723.1| isoleucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSSWNGVVVNRP------ELKYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP-----GAFTESDESILSV 393
                D L +             +  ++  ++ +     P             D+ +   
Sbjct: 631 VRISMDILSQVSET------YRKIRNTLRFLIANTSDFNPAEDTVAYDDLRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   N         +++   V     Y D  K     +        +  TV
Sbjct: 685 FNQLVRTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +++ ++  LL   +P  A +I+  L    E+
Sbjct: 745 FY---DILVKITKLLTPILPHTAEEIWSYLEFEAED 777



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|314986599|gb|EFT30691.1| valine--tRNA ligase [Propionibacterium acnes HL005PA2]
          Length = 870

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGVLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+   +++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRQLIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FSIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDIS-- 90
                            +    K                    + + F+D+   + +S  
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRGVGVSVG 175

Query: 91  YDDFIRTTEKRHHDTCRILWKKISDKGDIY 120
           +D    T         ++ + +   +G+ Y
Sbjct: 176 WDQLYTTISPESQRIAQLAFLRNHARGEAY 205


>gi|281421636|ref|ZP_06252635.1| leucine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404270|gb|EFB34950.1| leucine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 953

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 3/137 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + ++K Y+     YP+    H+GH    I +D+ AR+ RL+G +VL   G D +G    +
Sbjct: 28  ENKKKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLNGFNVLNPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G   +V    N   +R+  D +  S+D    +RT + +++   +  ++K+ +   
Sbjct: 88  YAIQTGQHPEVTTIANINRYREQLDKIGFSFDWVREVRTCDPKYYHWTQWAFQKMFNSFF 147

Query: 119 IYKGCYSGWYSLRDEAY 135
                 +       + +
Sbjct: 148 CNSCQKAQPIEKLIKRF 164



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 89/222 (40%), Gaps = 34/222 (15%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  D+L   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 681 VDVNIVSNDVLDIEAFKAWRPEYQNAEFILEDGKYICGWAIE---KMSKSMFNVVNPDMI 737

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +          +D +G+         +G    + +   +  ++    
Sbjct: 738 VEKYGADTLRLYEMFLGPVEASKPWDTNGI---------DGCHRFLKKFWGLFYENRTDN 788

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
              P A   +    L    ++++++ E+++    + +++  +  V+E+            
Sbjct: 789 F-LPSADEAAKPESLKSVHKLIKKVSEDIEKFSYNTSISAFMIAVNEL------------ 835

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                 +         E++  L IL+  F P +A +++  L 
Sbjct: 836 ---GQQKCRN-----KELLTDLVILIAPFAPHIAEELWAALG 869


>gi|209966833|ref|YP_002299748.1| isoleucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960299|gb|ACJ00936.1| isoleucyl-tRNA synthetase IleS [Rhodospirillum centenum SW]
          Length = 962

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 97/254 (38%), Gaps = 16/254 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW ++ + +                  PADL++ G D     FH+    +       
Sbjct: 555 IVDVWFESGSTHAFVLEDRPELKR------PADLYLEGSDQHRGWFHSSLLESCGTRGRA 608

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    +     +   GEK+SKS GN + P +VI+E G D LR ++V      +D      
Sbjct: 609 PYEAVLTHGFTLDQNGEKMSKSKGNTVAPQDVIKEFGADILRLWVVSTD-FTEDQRIGPK 667

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            L+ +  ADL   + N +   +  +    +          E +  +L   + +   +R++
Sbjct: 668 ILQAQ--ADLYRRLRNTLRYLLGALADWTEAERLPAAEMPELERWVLHRLAEMDGAVRQS 725

Query: 405 MQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKTNPD--RASTVLYVTVEVIRQLAI 460
           + +  +HR   ++ +   V     YFD +K   L    PD  R      V V +   L  
Sbjct: 726 IADYDLHRLATELHNFCAVDLSAFYFDVRKD-SLYCDRPDSVRRRATRTVMVHLFECLTA 784

Query: 461 LLQAFVPKLANKIF 474
            L   +   A + +
Sbjct: 785 WLAPVLCFTAEEAW 798



 Score = 71.3 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 13/187 (6%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KER    +     Y N   HIGHA   I+ DV+ R  ++ G +  +  G D HG  I   
Sbjct: 56  KERPLYVLHDGPPYANGNIHIGHALNKILKDVVNRSQQMLGRNAPYVPGWDCHGLPIEWK 115

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
            +           +     +D  +V  + + D  R             ++++  +GD   
Sbjct: 116 IEE----------KYRAAGKDKDEVPIVQFRDECRKFAADWVRVQAGEFRRLGVEGDWDN 165

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
              +              E+++            PV W   E      +  +   L+   
Sbjct: 166 PYTTMTNRAESRIV---REIHRFLLNGGLYKGAKPVLWSVVEKTALAEAEVEYHDLTSTT 222

Query: 182 SHPEFIL 188
               F +
Sbjct: 223 IWVRFPV 229


>gi|126307099|ref|XP_001375630.1| PREDICTED: similar to putative utrophin [Monodelphis domestica]
          Length = 1017

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 105/280 (37%), Gaps = 35/280 (12%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           Q I+ +W ++ T++       +           ADL++ GKD L   FH+    +     
Sbjct: 599 QDILDIWFESGTSWNCVLQGPEQR---------ADLYLEGKDQLGGWFHSSLLISVATRK 649

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV---------IEEVGVDALRYFLVREI 333
             P    +     +  KGEK+SKSLGNVI P  V             GVD LR+++    
Sbjct: 650 KAPFKTVLVHGFTVGEKGEKMSKSLGNVISPDFVINGGEDLSKDPPYGVDILRWWIAESN 709

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-----SDE 388
                  +++  +  R+  + A    N +  ++  +L +     P   A +       D+
Sbjct: 710 ------IFNEVKIGPRI-LNAARDDINKLRNTLRFLLGNLADFNPETDAVSIKNMYIIDQ 762

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-KKTNPDRAS 445
            +L +      +I E  +     + +  + +       + YF   K     +K +  +  
Sbjct: 763 YMLHLLQDFGNKITEAYRQFDFGKVVRLLQAFYPSQLSNFYFSIVKDRLYCEKEDDPKRR 822

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +      E++  +   +   +P LA +++  +    E + 
Sbjct: 823 SCQTALAEILDVMVRSIAPILPHLAEEVYQHIPYEKEPKS 862



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 15/159 (9%)

Query: 4   REKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA-- 61
           +++  +     Y N + H+GHA   ++ D+  RF  + GL V F  G D HG  I     
Sbjct: 111 KQEFCLHDGPPYANGEAHVGHALNKVLKDISNRFQMMRGLKVHFVPGWDCHGLPIELKAL 170

Query: 62  ----AQNAGVTTKV-------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRI 108
                +   ++          F +      +       I   +++   T + ++      
Sbjct: 171 SELGEKAQNLSPMEIRKKARAFAEAAIEKQKSAFIRWGIMADWNNCYHTFDGKYEAQQLK 230

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADG 147
           ++ ++  K  IY+     ++S        + E+      
Sbjct: 231 IFYQMYAKDMIYRAYKPVFWSPSARTALAEAELEYNPKH 269


>gi|71394074|gb|AAZ32113.1| isoleucyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 945

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 128/405 (31%), Gaps = 63/405 (15%)

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           E     D         P+  +    +FF++S  +       E   +         +    
Sbjct: 372 EETIVHDYPKCWRCDTPLIQISVPQWFFKISEIKP---KLIEEAKKIEWHPSWVGKRFLD 428

Query: 200 VKSGLKDLSLSRKTFDWGIKI--------------------------------------- 220
              G+ D  +SR+   WGI +                                       
Sbjct: 429 WLEGIDDWPISRQR-YWGIPLPIWVCDKCGEIKVVGSVDELGEAGKQLNDLHRPDIDKVT 487

Query: 221 ---------PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                        + I+ VW D+      + GY    +   +  WP    + G D +   
Sbjct: 488 LKCEKCGGTMHRVEDILDVWFDSGVAAWASLGYPKKEEPFNSL-WPVKHVIEGPDQIRGW 546

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           +++    + +     P    ++    +   G K+SKS GN +   E IE+   D LRY+ 
Sbjct: 547 WNSSLICSVITMDRKPFDHIMYHGFVLDTHGVKMSKSKGNAVTTNEAIEKYSRDELRYYY 606

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDES 389
           +      +D  +D + L  R N      + N        +  D   +          D  
Sbjct: 607 LTVDYS-QDMTFDWNTL--RENRKFFVVLSNTYRFF--QLYGDKIELEEVKNDLKPEDMW 661

Query: 390 ILSVCSRVLQEIRENMQNQLIHRALAQV-ISLVSEVDR-YFDAQKPWELKKTNPDRASTV 447
           ILS  + ++  + +  +    +RAL ++   +V+++ R Y    +       N       
Sbjct: 662 ILSKINSLVARVTQLNKEFRHNRALKEIEYFVVNDLSRTYVKLIRDRTWPTYNGKDKKAA 721

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIF-DILFVADENRCFQSLDQ 491
             V   V+ ++  LL   +P    +++  +L    E+   +   +
Sbjct: 722 QAVLYYVLDKVDRLLAPAMPFFTERMYLTVLGGGKESIHLEDWPK 766



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 53/161 (32%), Gaps = 19/161 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           KE  + Y      Y     H+G A+  I+ D   R+ R++G +V    G D HG  I   
Sbjct: 25  KEGPRYYFLDGPPYATGDIHVGTAWNKILKDYYLRYLRMEGYNVWAQPGYDTHGLPIENK 84

Query: 62  AQNA-----------------GVTTKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRH 102
            +                       + F  Q           L +   ++    T +  +
Sbjct: 85  VEKKLGLKNKGDIEKLGVENFIKECRNFATQYIGTMGRQFRNLGVWMDWEHPYLTLDNEY 144

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            +     +KK  +KG +YKG Y        +     +E+  
Sbjct: 145 IENSWFTFKKAFEKGLLYKGKYPVHVCPHCQTVVAYNEIEY 185


>gi|30681405|ref|NP_192770.2| isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase,
           putative [Arabidopsis thaliana]
          Length = 1190

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/452 (14%), Positives = 137/452 (30%), Gaps = 36/452 (7%)

Query: 48  TTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRH 102
               D+ G    +    +G   K          +    ++       SY    R+     
Sbjct: 379 VVAVDDDGLFTERITHFSGRYVKDADKDIIEAVKAKGRLVKTGSFTHSYPFCWRSDTPLI 438

Query: 103 HDTCRILWKKISDKG----DIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
           +      + ++           +        ++D+ ++N  E  +            P+ 
Sbjct: 439 YRAVPSWFVRVEQLKEKLLKSNEQTEWVPGYVKDKRFHNWLENARDWAISRSRFWGTPLP 498

Query: 159 WMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGI 218
               +     +     + L        F L     + +      G +   L R       
Sbjct: 499 IWISDDGEEVVIMDSVEKLEKLSGVKVFDLHRHHIDHITIPSSRGDEFGVLRRV------ 552

Query: 219 KIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPA 277
                 + +   W ++ +       Y         K +P D    G D  R +       
Sbjct: 553 ------EDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGDFVAEGLDQTRGWFYTLMVL 606

Query: 278 FLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                  P  K +  +G +L   G+K++K L N   P+EVI+E G DA+R +L+      
Sbjct: 607 STALFEKPAFKNLICNGLVLAEDGKKMAKKLRNYPPPLEVIDEYGADAVRLYLINSPVVR 666

Query: 337 -KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES--------- 386
            +   + K+G+   V             R +    K  +     P   T+          
Sbjct: 667 AEPLRFKKEGVLGVVKDVFLPWYN--AYRFLVQNAKRLETEGGVPFVPTDLATIQSANIL 724

Query: 387 DESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRAS 445
           D+ I S    +++ +RE M    ++  + +++  +  + + Y    +     +T  D   
Sbjct: 725 DQWIHSATQSLVRFVREEMDAYRLYTVVPRLLKFLDNLTNIYVRFNRKRLKGRTGEDDCH 784

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           T L     V+     ++  F P     ++  L
Sbjct: 785 TALSTLFNVLLTSCKVMAPFTPFFTETLYQNL 816



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 48/147 (32%), Gaps = 19/147 (12%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA----------- 61
             +    PH GH     I D++ R+  + G  V    G D HG  +              
Sbjct: 48  PPFATGLPHYGHILAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVENEIDRKLNIKRRD 107

Query: 62  ------AQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKI 113
                         +  V +    +  +       I + +  +T +    ++   ++ ++
Sbjct: 108 EVIKMGIDKYNEECRSIVTRYVAEWEKVITRCGRWIDFKNDYKTMDLPFMESVWWVFSQL 167

Query: 114 SDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            +K  +Y+G     YS   +   ++ E
Sbjct: 168 WEKNLVYRGFKVMPYSTGCKTPLSNFE 194


>gi|317055677|ref|YP_004104144.1| isoleucyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447946|gb|ADU21510.1| isoleucyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 1037

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 119/369 (32%), Gaps = 27/369 (7%)

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLS 178
             +       +++   +    E  +  +         P+   E +    R+       + 
Sbjct: 431 QNENINWVPETVKHGRFGKWLENARDWNISRNRYWSTPIPIWECDKCGKRVVLGSIDEIE 490

Query: 179 YYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNY 238
                    L  +  +++         D ++ R               ++  W ++ +  
Sbjct: 491 EKSGVRLTNLHRQYMDKIKFKCDCPDCDGTMVRV------------PEVLDCWFESGSVP 538

Query: 239 LTTTGYLDNPDGSKAKFWPADLHVI--GKDILRFHAIYWPAFLLSANLPLPKKVFSHGFI 296
                Y           +P+D  V   G+    F+ ++  +  L         V     +
Sbjct: 539 FAQKHYPFENKEWFDSHFPSDFIVEYTGQIRCWFYYLHVLSVALFDKPCFSNCVVHGTIL 598

Query: 297 LHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLV-REIACGKDGFYDKDGLKKRVNADLA 355
              G+K+SKS  N  DP+E++++ G DA R +L         D  +D +G+     +D  
Sbjct: 599 AKDGKKLSKSSRNYTDPMELMKKFGTDAFRLYLYQTNAMLIGDLQFDDNGI-----SDAL 653

Query: 356 NGIGNLVSRSVSMILKDYDGMIPTPGAFTE------SDESILSVCSRVLQEIRENMQNQL 409
             I   +  + +  +   +     P + T        D  +L+      + I +NM    
Sbjct: 654 QQIIFPLWNACNFYISYANIDDFKPESLTPPTSDNQLDRWMLAKLWEASEAISKNMDAYF 713

Query: 410 IHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPK 468
           +++ +  +I LV    + +    +    +K   +           V+  +  L     P 
Sbjct: 714 VNKYVENLIELVDGLTNWFIRRSRRRFWEKGLSEDKKNAYETLYYVLVNMCKLFAPAAPI 773

Query: 469 LANKIFDIL 477
           +A K++  L
Sbjct: 774 IAEKLYRTL 782



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNA------- 65
             +P  +PH G      I D++AR+  + G  V    G D HG  I    +         
Sbjct: 46  PPFPTGKPHHGTILVSFIKDLIARYWTMKGYKVPRVWGWDCHGLPIENQVEKDLGIDDKN 105

Query: 66  -----------GVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKK 112
                             V  N+  +++  + +   + YD   +T      ++    +K+
Sbjct: 106 YIENTLGIDKFNDKCFELVSGNNEAWKEYVEQMARWVDYDGAYKTMNPTFMESVMWAFKQ 165

Query: 113 ISDKGDIYKGCYSGWYSLRDE 133
             DKG IY+      Y    E
Sbjct: 166 CYDKGLIYRDYRVTPYCTHCE 186


>gi|299145099|ref|ZP_07038167.1| leucine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515590|gb|EFI39471.1| leucine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 944

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|330879980|gb|EGH14129.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 816

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 22  IGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFR 81
           +GH     I DVLAR  R+ G +VL   G D  G     AA  +  +   +  QN R+ +
Sbjct: 1   MGHVRNYTINDVLARQMRMKGFNVLMPMGWDAFGLPAENAALASNKSPSEWTRQNIRDMK 60

Query: 82  DMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
           +    L +S D    + T +  ++   +  + K+ +KG  YK      +   D+    ++
Sbjct: 61  EQLSPLGLSIDWSREVATCDPDYYKWNQWFFLKMLEKGIAYKHTQVVNWDPVDKTVLANE 120

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
           +V  G            V+  E  GY+F ++ Y ++LL   +S   +   +         
Sbjct: 121 QVING----RGWRSGALVERKEVPGYYFAITKYAEELLKDIDSLEGWPEMVRSMQRNWIG 176

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKF 255
              GL      +   + G  I      +     + L          ++    +A  
Sbjct: 177 KSEGLSFSFHHKIRDEHGALIDGGRLGVFTTRPETLMGVTFCAIPPEHSIALRAMQ 232



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 67/496 (13%), Positives = 139/496 (28%), Gaps = 99/496 (19%)

Query: 42  GLDVLFTTGTDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKR 101
           G       G   H ++    A+   +  +  +      F ++    D SY      ++ R
Sbjct: 288 GYGTGAVMGVPAHDERDFSLARKKDIPIRQVIAFEGIEFDEL--RWDASYQ-----SKDR 340

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
                   +  +  K +  +           E   N      G   Q Y     P+ + E
Sbjct: 341 GILINSGPFDGMELK-EASEAVIDHLAIHGGEKKINWRLRDWGISRQRYWGTPIPMIYCE 399

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
           + G           +L          +P    N ++         L +   +     +  
Sbjct: 400 KCGDVPVPLKDLPVILPL------DCIPDGSGNPLLKHPDF----LRVDCPSCGSQARRE 449

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAIYWPAFLLS 281
            D              Y            +   + P D ++ G +    H +Y   +  +
Sbjct: 450 TDTMDTFVDSSWYFMRYCEPGNEEAMVAEAAKYWMPMDHYIGGVEHAVLHLLYARFWTKA 509

Query: 282 A--------NLPLPKKVFSHGFIL------------------------------------ 297
                    N P  KK+F+ G +L                                    
Sbjct: 510 MRDEGLIDLNEPF-KKLFTQGMLLRECFYREIDGGKRRWFYPSEVEVRLSSSGQPTETFA 568

Query: 298 -HKG--------EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
              G        EK+SKS  NV++P E+IE+ G D  R F +      +   +   G++ 
Sbjct: 569 KEDGLPVSMGGIEKMSKSKNNVVEPREIIEKFGADTARLFTIFAGPPTQSIVWSDSGVE- 627

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSRVLQEIRENMQ 406
                   G    + R  S   +    ++     G   E    +      VL+ + ++ +
Sbjct: 628 --------GAYRYLRRLWSFAFRHQGSIVMREQRGTLDERSAQLRFDIHSVLESVNKDYE 679

Query: 407 NQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFV 466
               +  ++  + +++ +                    S   +V  E +  L  ++    
Sbjct: 680 KLHYNTIVSGAMKILNLL----------------ESEKSASSFVIREGLEILLKIINPIT 723

Query: 467 PKLANKIFDILFVADE 482
           P +A+ ++  L    +
Sbjct: 724 PHIAHVLWKALGFGKD 739


>gi|222085012|ref|YP_002543541.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221722460|gb|ACM25616.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 960

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 17/260 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 I+ VW D+ + +  T              WPADL++ G D     FH+    + 
Sbjct: 557 WTQVMDILDVWFDSGSTHTFTLEDRP------DLKWPADLYLEGSDQHRGWFHSSLLESA 610

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  KGEK+SKS GNV  P EV+++ G D LR +++      +D
Sbjct: 611 ATRGRAPYDAVLTHGFTMDEKGEKMSKSKGNVTSPQEVMKDAGADILRLWVMTSDYA-ED 669

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVL 398
               K  ++   N D    + N +   +  +  D   +I       E ++ +L   + + 
Sbjct: 670 LRVGKAIIQ--TNVDAYRKLRNTIRWMLGTLAHDKGEVI-AYADMPELEQLMLHRLAELD 726

Query: 399 QEIRENMQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPD--RASTVLYVTVEV 454
           + +RE+       R    +I   + E+   YFD +K   L    P   R    L V   +
Sbjct: 727 ELVRESYDAFDFKRIARALIDFSNVELSAFYFDVRKD-ALYCDAPSSLRRRAALAVIRTI 785

Query: 455 IRQLAILLQAFVPKLANKIF 474
              +   L   +P    + +
Sbjct: 786 FDCMVTWLAPMLPFTTEEAW 805



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI---- 58
            REK  +     Y N   HIGHA   I+ DV+ R  ++ G D  +  G D HG  I    
Sbjct: 53  GREKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYDSNYVPGWDCHGLPIEWKI 112

Query: 59  -AKAAQNAGVTTKVFVDQNSRNFRDMADVL 87
             K  +      +V V++  +  RD A   
Sbjct: 113 EEKYREKGKNKDEVPVNEFRQECRDFAAGW 142


>gi|75391303|sp|Q846V6|SYI_STAEP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29123080|gb|AAO65848.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
          Length = 871

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LKK   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKK--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LIDMTKLLAPILVHTAEEVWSH 770



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|300853478|ref|YP_003778462.1| leucyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433593|gb|ADK13360.1| leucyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 810

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 83/231 (35%), Gaps = 9/231 (3%)

Query: 5   EKLYISTAIAYPNA-QPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQ 63
           +KLY+    +YP+  + H GH +     D  AR  ++ G +V    G D  G      A 
Sbjct: 29  KKLYVLEMFSYPSGSKLHAGHWFNYAPVDSWARLKKMQGYNVFQPMGFDSFGLPAENYAI 88

Query: 64  NAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGDIYK 121
             G+      ++N          +    ++++ + T    ++   + L+ ++   G  Y+
Sbjct: 89  KTGIHPSDSTEKNIATMEKQLKSMGAMFNWENEVITCRPEYYKWNQWLFLQLYKHGLAYR 148

Query: 122 GCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYE 181
                 +    +    +++V  G                +   +FF+++ Y ++LL   +
Sbjct: 149 KNAPVNWCPSCKTVLANEQVQDGF----CERCGTEATKKDLTQWFFKITDYSEELLQCLD 204

Query: 182 --SHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
               PE    ++R     S   +    ++ S   F       D    + YV
Sbjct: 205 KLDWPEKTKAMQRHWIGKSTGTNVTFKVADSDIEFSVFTTRVDTLFGVTYV 255



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 35/299 (11%)

Query: 196 VISFVKSGLKDLSLSRKTFDWGIKIPDDPQYI-MYVWIDALTNYLTTTGYLDNPDGSK-- 252
            + F   G   L  S +  +        P           + +      Y+DN +  K  
Sbjct: 448 NVEFSPDGKSPLLKSEEFMNTTCPCCGGPAKREADTLDTFVCSSWYYLRYVDNKNSEKPF 507

Query: 253 -----AKFWPADLHVIGKDILRFHAIYWP--------AFLLSANLPLPKKVFSHGFILHK 299
                 K  P D++V G +    H +Y             L  + P          +   
Sbjct: 508 DKAKIDKMLPVDMYVGGPEHACMHLLYARFITKALRDMGFLDFDEPFLSLRHQGIILGPD 567

Query: 300 GEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIG 359
           G+K+SKS GN I P + I+E G D  R +L+      + G ++ DG+K        +   
Sbjct: 568 GQKMSKSKGNTISPDDCIQEYGSDVFRMYLMFGFDYSEGGAWNDDGIKS------ISKFV 621

Query: 360 NLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVIS 419
           + + R++S + +  +       +   +++ +    +  ++ + E+      + ++A+++ 
Sbjct: 622 DRIERTISSVKEIIESGDTGKTSMDAAEKELNYTRNFSIKSVSEDANKFQFNTSIARIME 681

Query: 420 LVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
             + + +Y               +   +  +   VI     ++  F P  A + ++ L 
Sbjct: 682 FTNALSKYIQ------------QKDKNISLLKDTVID-FVKIIAPFAPHFAEEQWESLG 727


>gi|227539717|ref|ZP_03969766.1| leucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240359|gb|EEI90374.1| leucine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 927

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 8/180 (4%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           ++ K Y+     YP+    H+GH    I +D+ +R+ R  G +VL   G D  G    + 
Sbjct: 29  DKPKYYVLDMFPYPSGAGLHVGHPLGYIASDIFSRYKRSKGFNVLHPMGYDSFGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +  + N   +R+  D +  SYD    IRT+E  ++   + ++ ++ +    
Sbjct: 89  AIQTGQHPAITTEANINRYREQMDNIGFSYDWSREIRTSEPDYYKWTQWIFMQLFNSWYN 148

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
            +   +       + +     V  G+ G       + +++  +E   F     Q +LL Y
Sbjct: 149 NELDKAVSIDTLVQHF-----VNVGSTGINAVCDEDILEFTADEWKGFDEEKQQRELLKY 203



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 70/175 (40%), Gaps = 32/175 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P ++I+  G D LR + +      +   ++ +G++             
Sbjct: 699 EKMSKSKFNVVNPDDIIDTYGADTLRLYEMFLGPLEQAKPWNTNGIEG------VYKFLK 752

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            V R        +     TP       ++      ++++++ ++++    + +++  +  
Sbjct: 753 KVWRLFHNAEGSFYVSDETPV------KAEYKALHKIIRKVEDDIERFSFNTSVSAFMIC 806

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFD 475
           V+E                     + +      ++ QL I+LQ + P +A +++ 
Sbjct: 807 VNE--------------------LTELKCNKRAILEQLIIVLQPYAPHIAEELWS 841


>gi|269976474|ref|ZP_06183459.1| valyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269935275|gb|EEZ91824.1| valyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 892

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 11/258 (4%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
              IM  W  +        G+L +     A  +P DL   G+DI+     +    + L  
Sbjct: 525 EVDIMDTWATSSLTPEIYAGFLHDDK-LFANTFPMDLRPQGQDIIRTWLFSTVVRSHLEF 583

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             LP  +   S   +    +K+SKS GNV+ P+ ++E+   DA+RY+       G D  +
Sbjct: 584 GTLPWRQAALSGWILDPDHKKMSKSKGNVVTPMGLLEKHSSDAVRYW-AASARLGTDAAF 642

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  V   LA  + N    ++SM   D + ++ +       D+S+L++ ++V+   
Sbjct: 643 DEGQMK--VGRRLAIKLLNASKFALSM-GGDGELVLDSERVTVPVDKSLLAMLAKVIDTA 699

Query: 402 RENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIRQ 457
               +     RAL    S      D Y +  K         T+     +        I  
Sbjct: 700 TAAFEKLDHARALEVTESFFWTLCDDYLELVKDRAYGVDTWTDQSGVDSARTTLALAIDA 759

Query: 458 LAILLQAFVPKLANKIFD 475
           +  LL  F+P  A +++ 
Sbjct: 760 VVRLLAPFLPFTAAEVWS 777



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE +Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREAVYSIDTPPPTVSGSLHVGHVFSYTHTDLVARYQRMRGKNVFYPMGWDDNGLPTER 104

Query: 61  AAQN 64
             QN
Sbjct: 105 RVQN 108


>gi|227874925|ref|ZP_03993077.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|306818249|ref|ZP_07451979.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|227844502|gb|EEJ54659.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|304648988|gb|EFM46283.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 892

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 11/258 (4%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
              IM  W  +        G+L +     A  +P DL   G+DI+     +    + L  
Sbjct: 525 EVDIMDTWATSSLTPEIYAGFLHDDK-LFANTFPMDLRPQGQDIIRTWLFSTVVRSHLEF 583

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             LP  +   S   +    +K+SKS GNV+ P+ ++E+   DA+RY+       G D  +
Sbjct: 584 GTLPWRQAALSGWILDPDHKKMSKSKGNVVTPMGLLEKHSSDAVRYW-AASARLGTDAAF 642

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  V   LA  + N    ++SM   D + ++ +       D+S+L++ ++V+   
Sbjct: 643 DEGQMK--VGRRLAIKLLNASKFALSM-GGDGELVLDSERVTVPVDKSLLAMLAKVIDTA 699

Query: 402 RENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIRQ 457
               +     RAL    S      D Y +  K         T+     +        I  
Sbjct: 700 TAAFEKLDHARALEVTESFFWTLCDDYLELVKDRAYGVDTWTDQSGVDSARTTLALAIDA 759

Query: 458 LAILLQAFVPKLANKIFD 475
           +  LL  F+P  A +++ 
Sbjct: 760 VVRLLAPFLPFTAAEVWS 777



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE +Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREAVYSIDTPPPTVSGSLHVGHVFSYTHTDLVARYQRMRGKNVFYPMGWDDNGLPTER 104

Query: 61  AAQN 64
             QN
Sbjct: 105 RVQN 108


>gi|241563452|ref|XP_002401710.1| valyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501902|gb|EEC11396.1| valyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 684

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 19/268 (7%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPD----GSKAKFWPADLHVIGKDILRFHAIY--WPAFLL 280
           +M  W  +  +   +T  + +          K +P DL     +I+R  A Y    A L 
Sbjct: 373 VMDTWATSSVSPQLSTHGISDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTILKAHLH 432

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
              LP    + S   +     K+SKS GNV+ P +++E+ G D +RY+       G D  
Sbjct: 433 QNTLPWENIMVSGWCLAEDRSKMSKSKGNVLVPEKLLEQYGSDVIRYWSANSK-LGADTA 491

Query: 341 YDKDGLKKRVNADLANGIGNLVSRS------VSMILKDYDGMIPTPGAFTESDESILSVC 394
           Y +D    +    L N + N           +    K    +        E D+ I++  
Sbjct: 492 YSED--VMKNGKRLVNKLWNAAKFVSIHFDKLKGKDKKAKLLDVKEKITNEFDQWIINKL 549

Query: 395 SRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTN--PDRASTVLYV 450
             +++     +QN     A+            D Y +  K     + N  P    + +  
Sbjct: 550 VELVKLATNELQNYEYANAMHLTEKFFWAVFCDNYLEISKTRSYDEENKNPQEQYSSILT 609

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILF 478
              V++ L  L   F+P +  +++ IL+
Sbjct: 610 LYHVMQTLLKLFAPFMPHITEELYQILY 637



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 15/148 (10%)

Query: 1   MKEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + E   I T     + Q HIGH Y     D + RF R+ G ++ +  G D++G    +
Sbjct: 33  VSKEETYVIDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMIGKNIFYPMGFDDNGLPTER 92

Query: 61  AAQNAGV-------------TTKVFVDQNSRNFRDMADVLDISYDD--FIRTTEKRHHDT 105
             +                   +  V      FR + + + +S D     +T        
Sbjct: 93  LVEKQKQIKAYNTDRSEFIKICEEVVASEEEKFRSLFNQIALSVDWSLEYQTISPLSRKI 152

Query: 106 CRILWKKISDKGDIYKGCYSGWYSLRDE 133
            ++ +  +  K ++Y+      +   D 
Sbjct: 153 SQMSFLDLVQKEEVYRANQPILWDPVDG 180


>gi|168491459|ref|ZP_02715602.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225855089|ref|YP_002736601.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|237650665|ref|ZP_04524917.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822424|ref|ZP_04598269.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|254782444|sp|C1CFN0|SYI_STRZJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|183574218|gb|EDT94746.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225723500|gb|ACO19353.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|148984094|ref|ZP_01817389.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923383|gb|EDK74496.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800472|emb|CBW33110.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|332073994|gb|EGI84472.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|15901494|ref|NP_346098.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111658560|ref|ZP_01409223.1| hypothetical protein SpneT_02000316 [Streptococcus pneumoniae
           TIGR4]
 gi|148997709|ref|ZP_01825273.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575153|ref|ZP_02721116.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068285|ref|YP_003877251.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|263511608|sp|P0CB61|SYI_STRPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|14973150|gb|AAK75738.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756208|gb|EDK63250.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578897|gb|EDT99425.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306409822|gb|ADM85249.1| Isoleucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|329296598|ref|ZP_08253934.1| isoleucyl-tRNA synthetase [Plautia stali symbiont]
          Length = 939

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 131/400 (32%), Gaps = 46/400 (11%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
            + K +      ++      +    + + + D+    A       +   VQW+ + G   
Sbjct: 396 HVEKLLHSYPHCWRHKTPIIFRATPQWFISMDQKGLRAQS---LKEIKGVQWIPDWGQAR 452

Query: 168 RLSAYQDKLLSYYESHPEFILPI----ERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDD 223
             +   ++          + +P+     + +E +      L +    R     GI+   D
Sbjct: 453 IEAMIANRPDWCISRQRTWGVPMALFVHKESEQLHPDTLELMEKVAQRVE-QDGIQAWWD 511

Query: 224 PQ----------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDI 267
                               + VW D+ +   +                P D+++ G D 
Sbjct: 512 LDPRDLMGDDADHYVKVTDTLDVWFDSGSTSFSVVD----ARPKFDGHAP-DMYLEGSDQ 566

Query: 268 L--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDAL 325
               F +    +  +    P  + +     +  +G K+SKS+GN + P +V++++G D L
Sbjct: 567 HRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMDKLGADIL 626

Query: 326 RYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----P 380
           R ++      G+    D+  + KR     A      +  +   +L +  G  P      P
Sbjct: 627 RLWVASTDYSGEMAVSDE--ILKR-----AADSYRRIRNTARFLLANLAGFNPATDCVSP 679

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-K 437
                 D   +       Q+I ++ +N   H  + +++   S      Y D  K  +   
Sbjct: 680 EEMVVVDRWAVGRALAAQQDIVQSYENYDFHEVVQRLMHFCSIEMGSFYLDVIKDRQYTA 739

Query: 438 KTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
           K +     +       +   L   +   +   A++I+  L
Sbjct: 740 KGDSLARRSCQTALRHIAEALVRWMAPIMSFTADEIWGYL 779



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGH+   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGMAGFDSPYVPGWDCHGLPIEHK 105

Query: 62  AQNAGVTTKV-------------FVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                     +  +     +     L +  ++D    T   +     
Sbjct: 106 VEQMIGKPGEKVSAAEFREACRNYAAEQVEGQKKDFIRLGVLGNWDHPYLTMNFQTEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI   G ++KG     + +   +   + EV  
Sbjct: 166 IRTLGKIIGNGHLHKGAKPVHWCMDCRSALAEAEVEY 202


>gi|315604680|ref|ZP_07879743.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313692|gb|EFU61746.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 903

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 10/255 (3%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           IM  W  +  +     G+LD+ D   A+ +P DL   G+DI+     +    A L    L
Sbjct: 539 IMDTWATSSLSPQLACGWLDDED-LFARTYPMDLRPQGQDIIRTWLFSTVVRADLEFGAL 597

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P      S   +    +K+SKS GNV+ P+ ++E+ G DA+RY+       G D  +D+ 
Sbjct: 598 PWKHAGLSGWILDSDHKKMSKSKGNVVTPMGILEKYGSDAVRYW-AASARLGLDAAFDEQ 656

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            +K  +   LA  + N    +++M  +     +         D ++++  SRV+ E    
Sbjct: 657 QMK--IGRRLAIKVLNASKFALTMGGEGAAIDLDPALVTVPLDRAVVATLSRVIDEASAA 714

Query: 405 MQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKT---NPDRASTVLYVTVEVIRQLAI 460
           + +    RAL    S      D Y +  K     +    +   A++       VI  +  
Sbjct: 715 LASYEHSRALEVTESFFWTFCDDYLELVKERAYNRDGAWDEASAASARAALAIVIDNVVR 774

Query: 461 LLQAFVPKLANKIFD 475
           LL  F+P +  +++ 
Sbjct: 775 LLAPFLPYVTEEVWS 789



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3   EREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            RE++Y I T     +   HIGH +     DV+AR+ R+ G  V +  G D++G    + 
Sbjct: 42  SREQVYSIDTPPPTVSGSLHIGHVFSYTHTDVVARYQRMMGKSVFYPMGWDDNGLPTERR 101

Query: 62  AQN 64
            QN
Sbjct: 102 VQN 104


>gi|195348747|ref|XP_002040909.1| GM22440 [Drosophila sechellia]
 gi|194122419|gb|EDW44462.1| GM22440 [Drosophila sechellia]
          Length = 1195

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 99/281 (35%), Gaps = 17/281 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       +    +      +PAD    G D     F+ +   +  L    
Sbjct: 533 VFDCWFESGSMPFAQQHFPFENEKDFMNNFPADFIAEGIDQTRGWFYTLLVISTALFNKA 592

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    + S   +   G+K+SK   N  DP+EV+ + G DALR +L+       +    K+
Sbjct: 593 PFKNLIASGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINSPVVRAESLRFKE 652

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILK--------------DYDGMIPTPGAFTESDESI 390
              + +  D+     N     +  I++              D +  +      +  D  I
Sbjct: 653 EGVRDIIKDVFLPWYNAYRFLLQNIVRYEKEDLAGNGQYTYDRERHLKNMDKASVIDVWI 712

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
           LS    +L+     M+   ++  + ++   + ++ + Y    +     +   D+    L 
Sbjct: 713 LSFKESLLEFFATEMKMYRLYTVVPRLTKFIDQLTNWYVRLNRRRIKGELGADQCIQSLD 772

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLD 490
              +V+  +  ++  F P L   IF  L +       +  D
Sbjct: 773 TLYDVLYTMVKMMAPFTPYLTEYIFQRLVLFQPAGTLEHAD 813



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 74/233 (31%), Gaps = 23/233 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 44  KGKPKYTFYDGPPFATGLPHYGHILAGTIKDIVTRYAYQQGYHVDRRFGWDCHGLPVEFE 103

Query: 62  AQN----------AGVTTKVFVDQNSRNFRDMADVLD---------ISYDDFIRTTEKRH 102
                        A +    +  +  +     AD  +         I + +  +T    +
Sbjct: 104 IDKLLNIKGPEDVAKMGIAAYNAECRKIVMRYADEWENVVTRVGRWIDFKNDYKTLYPWY 163

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEE 162
            ++   ++K++ DKG +Y+G     YS       ++ E  +             ++ +  
Sbjct: 164 MESIWWIFKQLFDKGLVYQGVKVMPYSTACTTSLSNFEANQNYKEVVDPCVVVALEAVSL 223

Query: 163 EGYFFRLSAYQDKLLSYYESHPEFIL-PIERRNEVISFVKSGLKDLSLSRKTF 214
              FF +            S+    + P     +V       L  L+ SR ++
Sbjct: 224 PKTFFLV---WTTTPWTLPSNFACCVHPTMTYVKVRDVKSDRLFVLAESRLSY 273


>gi|325137586|gb|EGC60167.1| isoleucyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 929

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 107/306 (34%), Gaps = 30/306 (9%)

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
            +  D     M VW D+ + + +           +   WPADL++ G D     F +   
Sbjct: 524 CEHYDKLSDTMDVWFDSGSTHYSVVK------QREELDWPADLYLEGSDQHRGWFQSSML 577

Query: 276 PAFLLSANLPLPKKVFSHGFILH-KGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIA 334
                S      K++ +HGF++  +G+K+SKS+GNV+ P EV  E G D LR +      
Sbjct: 578 TGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFGADILRLWAAS--- 634

Query: 335 CGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVC 394
                 Y  +    +            +  ++S +  +     P   A  ++D   +   
Sbjct: 635 ----TDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQADMVEIDRY 690

Query: 395 SRVLQE------IRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
           + VL          +       H A+  ++S  SE     Y D  K      K +     
Sbjct: 691 AVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLYTTKADSHARR 750

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRL-----KPGFMLH 500
           +       + R L +L+   +     + +DI+   +E+               K    L 
Sbjct: 751 SAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEFPTINEKTEAELV 810

Query: 501 KTFDPI 506
           K +  I
Sbjct: 811 KKWTAI 816



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R K  +     Y N   HIGHA   I+ D++ R     G D  +  G D HG  I   
Sbjct: 46  KGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVM 105

Query: 62  AQNAGVT----------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRIL 109
            +                + +  +     +     L +   +D    T + +       +
Sbjct: 106 VEKLHGKDMPKARFRELCREYAAEQVACQKKDFIRLGVLGDWDKPYLTMDFKTEADTVRM 165

Query: 110 WKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRL 169
             +I   G +Y+G     + L   +   + EV              P +        F L
Sbjct: 166 LGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAALAAAFGL 225

Query: 170 SAYQDKLLSYYESHPEFILPI 190
           +  + K  +   +   + LP 
Sbjct: 226 AGIEGKAFAVIWTTTPWTLPA 246


>gi|149021249|ref|ZP_01835495.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930350|gb|EDK81334.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELIYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|148988705|ref|ZP_01820138.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925906|gb|EDK76981.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|301167554|emb|CBW27137.1| leucyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 924

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K YI     YP+    H+GH    I +D+  RF RL+G +VL   G D  G    +
Sbjct: 28  SSKPKYYILDMFPYPSGAGLHVGHPLGYIASDIYTRFKRLEGYNVLHPMGYDAFGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G        +N   +R+  D +  SYD    ++T + +++   +  + ++ +   
Sbjct: 88  YAIQTGRHPADTTRENIARYREQLDKIGFSYDWNREVQTCDPKYYKWTQWAFIQMFEHYY 147



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 83/204 (40%), Gaps = 37/204 (18%)

Query: 288 KKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLK 347
           K V++ G+ +    K+SKS+ NV++P  ++E  G D LR + +      +   ++ +G++
Sbjct: 687 KDVYNCGYAVE---KMSKSMFNVVNPDTIVENYGADTLRLYEMFLGPLEQSKPWNTNGIE 743

Query: 348 KRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQN 407
                     + NL  +         D  +        +DE  L V    ++++ E++  
Sbjct: 744 GVHR--FLKKLWNLFYK---------DEKLCVVSDAPSADE--LKVLHTCIKKVNEDIDT 790

Query: 408 QLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVP 467
              + +++  +  V+++ +                    +     +++  L ILL  F P
Sbjct: 791 FSFNTSISAFMICVNDLSK--------------------LKCHKKDILNDLIILLSPFAP 830

Query: 468 KLANKIFDILFVADENRCFQSLDQ 491
               +++  L  + E+  F S+ +
Sbjct: 831 HFCEELWQELGHS-ESITFASMPE 853


>gi|295085807|emb|CBK67330.1| leucyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 944

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|160884845|ref|ZP_02065848.1| hypothetical protein BACOVA_02835 [Bacteroides ovatus ATCC 8483]
 gi|156109880|gb|EDO11625.1| hypothetical protein BACOVA_02835 [Bacteroides ovatus ATCC 8483]
          Length = 944

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|327403738|ref|YP_004344576.1| leucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319246|gb|AEA43738.1| leucyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 961

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 4   REKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
           + K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D  G    + A
Sbjct: 30  KPKYYVLDMFPYPSGAGLHVGHPLGYIASDIYARYKRLRGYNVLHPMGYDSFGLPAEQYA 89

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISD 115
              G    +  +QN   +RD  D +  S+  D  +RT+   ++   + ++K+I +
Sbjct: 90  IQTGQHPAITTEQNIARYRDQLDKIGFSFDWDREVRTSSPEYYKWTQWIFKQIFN 144



 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/408 (14%), Positives = 132/408 (32%), Gaps = 55/408 (13%)

Query: 92  DDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYN 151
           D ++ T +                +GD  +      ++     +      Y      +  
Sbjct: 511 DKYLPTEDGEPPLARAEKSAWKYSEGDRMEYNTMPGWAGSSFYFLR----YMDPHNTHEF 566

Query: 152 AQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSR 211
                  +  +   +   S +    L Y     +F+           F K   + + L R
Sbjct: 567 VSKEKADYWNQVDLYIGGSEHATGHLLYSRFWCKFLFDKGFIGFDEPFKKMINQGMILGR 626

Query: 212 KTFDWGIKIP----DDPQYIMYVWIDALT-------------NYLTTTGYLDNPDGSKAK 254
            +  + I         P +I   WI+ L              +++T +  ++    S+ +
Sbjct: 627 SSLAYRIDFKEIDLKHPIFISSGWINKLNKSEDQFDVFQEMNSHITKSVGIEMDKVSEFQ 686

Query: 255 FWPADLHVIGKDILRFHAIYWPAF-LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDP 313
             P  + +   D  +     + A+     N     +         + EK+SKS  NV  P
Sbjct: 687 KIPVHVDISLVDNDKLDTEAFKAWRPDFTNAEFILEDDGTFICESEVEKMSKSKFNVQTP 746

Query: 314 IEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDY 373
            E++E+ G D LR + +      +   +D  G+    N      +  L      +I+   
Sbjct: 747 DELVEKFGADTLRMYEMFLGPLEQTKPWDTKGISGVHN--FLRKLWRLFFEDGKLIV--- 801

Query: 374 DGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKP 433
                        D++ L    + ++++ ++++    +  ++ ++  V+E       QK 
Sbjct: 802 --------TEGSVDKASLKTLHKTIKKVEDDLERYSFNTNVSTLMICVNE----LTEQK- 848

Query: 434 WELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVAD 481
                            + EV+ QL +LL  + P  A ++++ +    
Sbjct: 849 ---------------CHSKEVLEQLVVLLAPYAPHTAEELWEAIGYEK 881


>gi|323338769|gb|EGA79984.1| Ils1p [Saccharomyces cerevisiae Vin13]
          Length = 959

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 9/262 (3%)

Query: 225 QYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSA 282
           + +   W ++ +    +  Y         +  PA+    G D     F+ +      L  
Sbjct: 542 EEVFDCWFESGSMPYASQHYPFENTEKFDERVPANFISEGLDQTRGWFYTLAVLGTHLFG 601

Query: 283 NLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFY 341
           ++P    + S   +   G K+SKSL N  DP  V+ + G DALR +L+       +   +
Sbjct: 602 SVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLINSPVLKAESLKF 661

Query: 342 DKDGLKKRVNADLANGIGNL----VSRSVSMILKDYDGMIPTP-GAFTESDESILSVCSR 396
            ++G+K+ V+  L     +        ++   + + D        +    D  IL+    
Sbjct: 662 KEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDNVMDRWILASMQS 721

Query: 397 VLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++Q I E M    ++  + ++++ + E+ + Y    +     +   +     L    + +
Sbjct: 722 LVQFIHEEMGQYKLYTVVPKLLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDAL 781

Query: 456 RQLAILLQAFVPKLANKIFDIL 477
                 +  F P L+  I+  L
Sbjct: 782 FTFVRAMAPFTPFLSESIYLRL 803



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K++ +        +    PH GH     I D++ R+  + G  V    G D HG  I   
Sbjct: 54  KDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGVPIEHI 113

Query: 62  A-----------------QNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                             +N     +  V   + ++R     L   I +D+  +T     
Sbjct: 114 IDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDWRKTIGRLGRWIDFDNDYKTMYPSF 173

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            ++    +K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 174 MESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSNFEAQQNYK 217


>gi|293366842|ref|ZP_06613518.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319143|gb|EFE59513.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 916

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 100/262 (38%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +    F+  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFFMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LIDMTKLLAPILVHTAEEVWSH 770



 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 14/154 (9%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQNAG 66
             +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A    G
Sbjct: 50  FILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKG 109

Query: 67  VT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCRILWKK 112
           V              K F  +     +     L +   +++   T    +      L+ +
Sbjct: 110 VDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGE 169

Query: 113 ISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
           ++DKG IYKG    ++S   E+   + E+     
Sbjct: 170 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|28897308|ref|NP_796913.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363892|ref|ZP_05776640.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876271|ref|ZP_05888626.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|81728462|sp|Q87S90|SYI_VIBPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28805517|dbj|BAC58797.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308092895|gb|EFO42590.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308112965|gb|EFO50505.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 942

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 126/405 (31%), Gaps = 46/405 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D     A+       VQWM E G      
Sbjct: 400 HHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVQWMPEWGQSRIEG 459

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ-- 225
             + +          + +PI      E      + L+ +    K  +  GI+   D    
Sbjct: 460 MIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIEKVAKLVEEKGIQAWWDVDAA 519

Query: 226 --------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                           + VW D+   +     +       +     ADL++ G D     
Sbjct: 520 ELLGDEAEQYEKVLDTLDVWFDSGVTH-----FSVVDAREEYNGNSADLYLEGSDQHRGW 574

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +  +    P  + +     +   G K+SKS+GNV+ P +V  ++G D LR ++
Sbjct: 575 FQSSLISSIAMKGVAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWV 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                 G+      + LK+  +A         +  +    L + +G  P           
Sbjct: 635 ASTDYTGEVAV-SDEILKRSADA------YRRIRNTARFFLANLNGFNPATDIVPAEEMV 687

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
             D   +       +EI +      IH    +++   S      Y D  K  +   K   
Sbjct: 688 ALDRWAVGRALAAQEEIIKAYDEYNIHAVTQRLMQFCSIEMGSFYLDVIKDRQYTAKQGG 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               +       ++  L   +   +   A++I++ +    E   F
Sbjct: 748 HAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGEREKFVF 792



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L I   +D   RT +       
Sbjct: 106 VEKKVGKPGQKVTAAEFREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+  G + KG     +     +   + EV  
Sbjct: 166 IRALGKIASNGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|307701819|ref|ZP_07638833.1| valine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613077|gb|EFN92332.1| valine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 892

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 11/258 (4%)

Query: 224 PQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLS 281
              IM  W  +        G+L +     A  +P DL   G+DI+     +    + L  
Sbjct: 525 EVDIMDTWATSSLTPEIYAGFLHDDK-LFANTFPMDLRPQGQDIIRTWLFSTVVRSHLEF 583

Query: 282 ANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFY 341
             LP  +   S   +    +K+SKS GNV+ P+ ++E+   DA+RY+       G D  +
Sbjct: 584 GTLPWRQAALSGWILDPDHKKMSKSKGNVVTPMGLLEKHSSDAVRYW-AASARLGTDAAF 642

Query: 342 DKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEI 401
           D+  +K  V   LA  + N    ++SM   D + ++ +       D+S+L++ ++V+   
Sbjct: 643 DEGQMK--VGRRLAIKLLNASKFALSM-GGDGELVLDSERVTVPVDKSLLAMLAKVIDTA 699

Query: 402 RENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELK---KTNPDRASTVLYVTVEVIRQ 457
               +     RAL    S      D Y +  K         T+     +        I  
Sbjct: 700 TAAFEKLDHARALEVTESFFWTLCDDYLELVKDRAYGVDTWTDQSGVDSARTTLALAIDA 759

Query: 458 LAILLQAFVPKLANKIFD 475
           +  LL  F+P  A +++ 
Sbjct: 760 VVRLLAPFLPFTAAEVWS 777



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 43/193 (22%)

Query: 2   KEREKLY-ISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             RE +Y I T     +   H+GH +     D++AR+ R+ G +V +  G D++G    +
Sbjct: 45  TTREAVYSIDTPPPTVSGSLHVGHVFSYTHTDLVARYQRMRGKNVFYPMGWDDNGLPTER 104

Query: 61  AAQN--------------AGVTTKV--------------------------FVDQNSRNF 80
             QN                                                  ++ + F
Sbjct: 105 RVQNYFGVRCDPSLPYDPDFRPPYEGGEGKSIKNADQVPISRKNFVELCERLTAEDEKQF 164

Query: 81  RDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYND 138
            D+   L +S D    ++T  +R     +  + +   +G+ Y+    G + +  +     
Sbjct: 165 EDLWRRLGLSIDWSYTMQTIGQRAQRIAQTFFLRNLARGEAYQAQAPGLWDVTFQTAVAQ 224

Query: 139 DEVYKGADGQYYN 151
            E+       +Y+
Sbjct: 225 AELESREYPGFYH 237


>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 876

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 100/270 (37%), Gaps = 17/270 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
               Q IM VW D+ +++ +                PADL++ G D     F++      
Sbjct: 531 FTKEQDIMDVWFDSGSSHQSVLH------QRDDLQRPADLYLEGSDQYRGWFNSSLTTGV 584

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            ++   P    +        +G K+SKS+GN++ P +VI+++G D LR ++        D
Sbjct: 585 AVTGKAPYKGVLSHGFVNDGEGRKMSKSIGNIVVPDKVIKQMGADILRLWVASVDYQA-D 643

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                  LK+   +++   I N   R +   L D++            E D+ +L   + 
Sbjct: 644 VRLSDAILKQV--SEVYRKIRNTY-RFLLGNLADFNPEKDAISYDNLREVDQFMLVKLND 700

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKTNPD-RASTVLYVTVE 453
           +++ +    +N         V +         Y D  K     +   +     +  V  E
Sbjct: 701 LIKSVTTAYENYEFSSIYTSVNNFCTLDLSSFYLDFAKDVLYIEAEDNFERRAMQTVLHE 760

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADEN 483
            +  L  L+   +   A++++  +    E 
Sbjct: 761 SLLALTKLMSPILSHTADEVWSHMSSQQEE 790



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + R    +     Y N   H+GHA   ++ D + R+  + G +  +  G D HG  I +A
Sbjct: 60  EGRPLFILHDGPPYANGDLHMGHALNKVLKDFIVRYKSMSGYNAPYVPGWDTHGLPIEQA 119

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDI--------------SYDDFIRTTEKRHHDTCR 107
               GV  K       R   +      I               +D+   T +  +     
Sbjct: 120 LTKKGVNRKEMTVAEFRKLCEEYAYGQIDSQRTQFKQIGVRGDWDNPYITMKPEYEAEQI 179

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
            ++  +++KG IYKG    ++S   E+   + E+  
Sbjct: 180 KVFGDMANKGYIYKGLKPVYWSPSSESALAEAEIEY 215


>gi|260903301|ref|ZP_05911696.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107941|gb|EFO45481.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 942

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 126/405 (31%), Gaps = 46/405 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D     A+       VQWM E G      
Sbjct: 400 HHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVQWMPEWGQSRIEG 459

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ-- 225
             + +          + +PI      E      + L+ +    K  +  GI+   D    
Sbjct: 460 MIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIEKVAKLVEEKGIQAWWDVDAA 519

Query: 226 --------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                           + VW D+   +     +       +     ADL++ G D     
Sbjct: 520 ELLGDEAEQYEKVLDTLDVWFDSGVTH-----FSVVDAREEYNGNSADLYLEGSDQHRGW 574

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +  +    P  + +     +   G K+SKS+GNV+ P +V  ++G D LR ++
Sbjct: 575 FQSSLISSIAMKGVAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWV 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                 G+      + LK+  +A         +  +    L + +G  P           
Sbjct: 635 ASTDYTGEVAV-SDEILKRSADA------YRRIRNTARFFLANLNGFNPATDIVPAEEMV 687

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
             D   +       +EI +      IH    +++   S      Y D  K  +   K   
Sbjct: 688 ALDRWAVGRALAAQEEIIKAYDEYNIHAVTQRLMQFCSIEMGSFYLDVIKDRQYTAKQGG 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               +       ++  L   +   +   A++I++ +    E   F
Sbjct: 748 HAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGEREKFVF 792



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L I   +D   RT +       
Sbjct: 106 VEKKVGKPGQKVTAAEFREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+  G + KG     +     +   + EV  
Sbjct: 166 IRALGKIASNGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|153838772|ref|ZP_01991439.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747804|gb|EDM58694.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 942

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 126/405 (31%), Gaps = 46/405 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D     A+       VQWM E G      
Sbjct: 400 HHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVQWMPEWGQSRIEG 459

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ-- 225
             + +          + +PI      E      + L+ +    K  +  GI+   D    
Sbjct: 460 MIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIEKVAKLVEEKGIQAWWDVDAA 519

Query: 226 --------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                           + VW D+   +     +       +     ADL++ G D     
Sbjct: 520 ELLGDEAEQYEKVLDTLDVWFDSGVTH-----FSVVDAREEYNGNSADLYLEGSDQHRGW 574

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +  +    P  + +     +   G K+SKS+GNV+ P +V  ++G D LR ++
Sbjct: 575 FQSSLISSIAMKGVAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWV 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                 G+      + LK+  +A         +  +    L + +G  P           
Sbjct: 635 ASTDYTGEVAV-SDEILKRSADA------YRRIRNTARFFLANLNGFNPATDIVPAEEMV 687

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
             D   +       +EI +      IH    +++   S      Y D  K  +   K   
Sbjct: 688 ALDRWAVGRALAAQEEIIKAYDEYNIHAVTQRLMQFCSIEMGSFYLDVIKDRQYTAKQGG 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               +       ++  L   +   +   A++I++ +    E   F
Sbjct: 748 HAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGEREKFVF 792



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L I   +D   RT +       
Sbjct: 106 VEKKVGKPGQKVTAAEFREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+  G + KG     +     +   + EV  
Sbjct: 166 IRALGKIASNGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|4038324|gb|AAC97364.1| methionyl-tRNA synthetase [Buchnera aphidicola]
          Length = 234

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 82/230 (35%), Gaps = 9/230 (3%)

Query: 1   MKER-EKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA 59
           M  + +K+ ++ A+ Y N   HIGH  E I AD+  R+ R+   +V F +  D HG  I 
Sbjct: 1   MSNKFKKILVTCALPYANGPIHIGHMLEHIQADIWVRYQRMRNNEVWFISSDDAHGTAIM 60

Query: 60  KAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDI 119
             ++  G+T    + +            +IS+D++  T    +    R ++  +S++  I
Sbjct: 61  LKSEKLGITPIKLIKKIKEEHIIDFSNFNISHDNYHSTHCVENLFLLRKIFLSLSEQKLI 120

Query: 120 YKGCYSGWYSLRDEAYYNDD--------EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSA 171
            +     +Y    + +  D            K  +G       +  +  +       +S 
Sbjct: 121 NEKKIFQFYDNTKKMFLPDRFIKGTCPFCSSKNQNGDNCEICGSIYEPTDLVNPISVISN 180

Query: 172 YQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
               L +    +    L     N+ I            + +    G+K  
Sbjct: 181 SVPILKNTTHLYFNLPLFTNMLNKWIHSGILEKSVAKKTEEWLKSGLKEW 230


>gi|300361465|ref|ZP_07057642.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354084|gb|EFJ69955.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 934

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 113/304 (37%), Gaps = 30/304 (9%)

Query: 205 KDLSLSRKTFDWGIKIPDDPQY-------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWP 257
                + +    G K    P         I+ VW D+ ++      +           +P
Sbjct: 501 WYTHTAEELLPKGFKSEHSPNGKFRKETDILDVWFDSGSS------WAGVMKERDGLGFP 554

Query: 258 ADLHVIGKDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIE 315
           ADL++ G D     F+     +  ++   P  + +     +  KG K+SKSLGNVI P +
Sbjct: 555 ADLYLEGSDQYRGWFNLSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPND 614

Query: 316 VIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDG 375
           V++++G + +R ++        D    +D L++   +         +  ++  +L +   
Sbjct: 615 VVKQMGAEIIRLWVAGADT-TSDVAVSQDILRQSAES------YRKIRNTMRFMLANTTD 667

Query: 376 MIPTPG-----AFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYF 428
             P          +  D+ +    +R+++E  E       +    +V S +       Y 
Sbjct: 668 FDPKQNSIAYPDMSGVDQYMEIKLNRLIEEAIETYNKFDFNSVYKKVFSFISNDLSAFYL 727

Query: 429 DAQKPWELKK-TNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQ 487
           D  K        + +   ++  V  +V+ +L  L+   +P    +++  L   ++     
Sbjct: 728 DFAKDVLYIDPEDSETRRSMQTVIYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLA 787

Query: 488 SLDQ 491
           ++ +
Sbjct: 788 NMPE 791



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     + N   H+GH+   I  D++ RF  ++G    +  G D HG  + + 
Sbjct: 45  EGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQ 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV  K             F ++  +        L +   +D    T + +      
Sbjct: 105 LAKKGVDRKSMDRAKYRELCRQFAEEQVKKQMTDFKRLGVMADWDHPYITLQPKFEAEEI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQ 158
            ++ ++  KG IYKG    ++S   E+   + EV              P++
Sbjct: 165 RVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYHDIKSPRIYVAFPIE 215


>gi|168486973|ref|ZP_02711481.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570098|gb|EDT90626.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 930

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 80.2 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 61/174 (35%), Gaps = 14/174 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
            ++ ++++KG IY+G    ++S   E+   + E+             N V++ +
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYHDLVSTSLYYANKVKYGK 218


>gi|329729986|gb|EGG66377.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 916

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LIDMTKLLAPILVHTAEEVWSH 770



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|237716997|ref|ZP_04547478.1| leucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262405765|ref|ZP_06082315.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644879|ref|ZP_06722617.1| leucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808233|ref|ZP_06766996.1| leucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442980|gb|EEO48771.1| leucyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262356640|gb|EEZ05730.1| leucyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292639773|gb|EFF58053.1| leucine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444560|gb|EFG13264.1| leucine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 944

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  ++K+ +    
Sbjct: 89  AIQTGQHPAITTVNNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFQKMFNSYYC 148



 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 676 VDVNIVSNDILDLEAFKAWRPEYKTAEFILEDGKYVCGWAVE---KMSKSMFNVVNPDMI 732

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+     D  
Sbjct: 733 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIRKFWSLFYSRTDEY 783

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
           + T    T+ +   L    ++++++  +++    + +++  +  V+E+         + L
Sbjct: 784 LVTDEPATKEE---LKSLHKLIKKVTGDIEQFSYNTSISAFMICVNEL---------FNL 831

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
           K +             E++ QL I L  F P +  +++D+L 
Sbjct: 832 KCSKK-----------EILEQLVITLAPFAPHVCEELWDVLG 862


>gi|328945573|gb|EGG39724.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 937

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FTKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGA-----FTESDESILSV 393
                D L +             +  ++  ++ +     P   A         D+ +   
Sbjct: 631 VRISMDILGQVSET------YRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIR 684

Query: 394 CSRVLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELKKT----NPDRASTV 447
            +++++ IR+   +         +++ V       Y D  K     +        +  TV
Sbjct: 685 FNQLVETIRKAYADFEFLTIYKAIVNFVTIDLSAFYLDFAKDVVYIEAAKSLERRQMQTV 744

Query: 448 LYVTVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
            Y   +V+ ++  LL   +P  A +I+  L    E 
Sbjct: 745 FY---DVLVKITKLLTPILPHTAEEIWSYLEHEKEE 777



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    +  G D HG  I + 
Sbjct: 45  EGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTKV------------FVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
               GV  K             +        ++    L +S  +D+   T    +     
Sbjct: 105 LAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWDNPYVTLTSDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ +++ KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|328472070|gb|EGF42947.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 942

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 126/405 (31%), Gaps = 46/405 (11%)

Query: 116 KGDIYKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLS 170
               Y+  Y   +  +    +    + +   D     A+       VQWM E G      
Sbjct: 400 HHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVQWMPEWGQSRIEG 459

Query: 171 AYQDKLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTFD-WGIKIPDDPQ-- 225
             + +          + +PI      E      + L+ +    K  +  GI+   D    
Sbjct: 460 MIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTLELIEKVAKLVEEKGIQAWWDVDAA 519

Query: 226 --------------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--R 269
                           + VW D+   +     +       +     ADL++ G D     
Sbjct: 520 ELLGDEAEQYEKVLDTLDVWFDSGVTH-----FSVVDAREEYNGNSADLYLEGSDQHRGW 574

Query: 270 FHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFL 329
           F +    +  +    P  + +     +   G K+SKS+GNV+ P +V  ++G D LR ++
Sbjct: 575 FQSSLISSVAMKGVAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLGADILRLWV 634

Query: 330 VREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPG-----AFT 384
                 G+      + LK+  +A         +  +    L + +G  P           
Sbjct: 635 ASTDYTGEVAV-SDEILKRSADA------YRRIRNTARFFLANLNGFNPATDIVPAEEMV 687

Query: 385 ESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNP 441
             D   +       +EI +      IH    +++   S      Y D  K  +   K   
Sbjct: 688 ALDRWAVGRALAAQEEIIKAYDEYNIHAVTQRLMQFCSIEMGSFYLDVIKDRQYTAKQGG 747

Query: 442 DRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCF 486
               +       ++  L   +   +   A++I++ +    E   F
Sbjct: 748 HAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGEREKFVF 792



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K ++   +     Y N   HIGHA   I+ D++ +   L G D  +  G D HG  I   
Sbjct: 46  KGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELM 105

Query: 62  AQNAGVTT-------------KVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +                   + +        ++    L I   +D   RT +       
Sbjct: 106 VEKKVGKPGQKVTAAEFREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANI 165

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                KI+  G + KG     +     +   + EV  
Sbjct: 166 IRALGKIASNGHLLKGFKPVHWCTDCGSALAEAEVEY 202


>gi|315655211|ref|ZP_07908112.1| isoleucyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315490466|gb|EFU80090.1| isoleucyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 1105

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 76/403 (18%)

Query: 143 KGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKS 202
                 +      P+ +     +F R++ ++D+++    +      P   +N +     +
Sbjct: 452 YEHSYPHCWRCRKPLIYKAVSSWFVRVTEFRDRMVEL--NQQITWTPEHTKNGIFGNWLA 509

Query: 203 GLKDLSLSRKTFD-----------------------------WGIKI------------- 220
           G +D S+SR  F                              +G+KI             
Sbjct: 510 GARDWSISRNRFWGSPIPVWKSDNPAYPRIDVYGSFEELERDFGVKIENLHRPFIDELTR 569

Query: 221 --PDDPQY---------IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHV--IGKDI 267
             PDDP           ++  W ++ +       Y           +P D  V  IG+  
Sbjct: 570 PNPDDPSGKSMMRRVPEVLDCWFESGSMPYAQVHYPFENRDWFETHYPGDFIVEYIGQTR 629

Query: 268 LRFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRY 327
             F+ ++  A  L         +     +   G K+SKSL N  D  EV ++ G DA+R+
Sbjct: 630 GWFYTLHVLATALFDRPAFLNCISHGIVLGDDGRKMSKSLRNYPDVNEVFDKYGADAMRW 689

Query: 328 FLVREI-ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVS------------MILKDYD 374
           FL+      G +      G++  V   +          ++              ++  +D
Sbjct: 690 FLMSSPVVSGGNLIVTDKGIRDTVRQTILPVWNAYYFFTLYAGTCQQGAGYEAKLVDVFD 749

Query: 375 GMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPW 434
                  A    D  +LS   ++  ++R  + N  I  A   V      ++ ++      
Sbjct: 750 AACVN--ALPMMDRYLLSAARQLFHDLRTELDNFHIPEACEHVRQFTEVLNNWYIRISRQ 807

Query: 435 ELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL 477
                +P        V   V+  L   +   +P +A +I+  L
Sbjct: 808 RFWDEDP----AAFDVLYTVLEALMRAMAPLLPLIAEEIWRGL 846



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 26/158 (16%)

Query: 13  IAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQK--------------- 57
             + N  PH GH     + D++ R+  + G  V    G D HG                 
Sbjct: 73  PPFANGLPHYGHLLTGYVKDIVGRYQTMRGHRVERRFGWDTHGLPAELEAERILGIEDKE 132

Query: 58  ---------IAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRI 108
                    I    Q    +   +  +        A  +D   D   +T +    ++   
Sbjct: 133 QIEGPGGMGIEAFNQACRDSVLKYTKEWEEYVTRQARWVDFGNDY--KTLDPTFMESVIW 190

Query: 109 LWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            +K + DKG IY+G     Y   D    ++ E+    D
Sbjct: 191 AFKTLYDKGLIYEGFKVLPYCWHDGTPLSNHELKMDDD 228


>gi|301617870|ref|XP_002938354.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial [Xenopus
           (Silurana) tropicalis]
          Length = 899

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 6/202 (2%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K + K Y+ +   YP+ + H+GH     I+D +ARF ++ G+ +L           +   
Sbjct: 75  KSKPKFYVLSMFPYPSGKLHMGHVRVYTISDAIARFQKMRGMQLLNPL-WQSISLYVKWL 133

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDKGDI 119
           A N    ++    +N ++ R+  D + + +  D  I T    ++   + L+ K+ + G  
Sbjct: 134 ASNVLHASQQISGRNIQHMREQLDRIGLCFNWDREITTCSGDYYKWTQYLFLKMYEAGLA 193

Query: 120 YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSY 179
           Y+      +   D+    +++V +        A+   V+    + +F + + Y   +   
Sbjct: 194 YQKEAMVNWDPVDQTVLANEQVDENGCSWRSGAK---VEQKYLKQWFLKTTVYAKDMSDA 250

Query: 180 YESHPEFILPIERRNEVISFVK 201
               PE+      +   I    
Sbjct: 251 LADLPEWYGVKSMQANWIGECN 272



 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 74/444 (16%), Positives = 130/444 (29%), Gaps = 74/444 (16%)

Query: 81  RDMADVLDISYDDFIRTTEKRHHDTCRI-LWKKISDKGDIYKGCYSGWYSLRDEAYYNDD 139
            ++AD L + Y   I T+       C    +  +S +                    +D 
Sbjct: 379 AELADKLGLLYVKVIETSNDGTEMICNSGKFTGLSRQEAFLAITQQASSEGVGGHLTSDK 438

Query: 140 EVYKGADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISF 199
                   Q Y     PV      G           LL    S     L           
Sbjct: 439 LRDWLISRQRYWGTPIPVIHCPSCGTVPVPYEDLPVLLPSAASFTGKGLSPLASASEWIN 498

Query: 200 VKSGLKDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFW-PA 258
            K      + SR+T         D              Y          D + A FW P 
Sbjct: 499 CKCPRCTGAASRET---------DTMDTFVDSAWYYLRYTDPLNSERPFDKAWADFWMPV 549

Query: 259 DLHVIGKDILRFHAIYWPAFLLSA--------NLPLPKKVF------------------- 291
           DL++ GK+    H  Y   F              P  K +                    
Sbjct: 550 DLYIGGKEHAVMHLYYARFFNHFCSSQGMTKHREPFHKLLVQGLIKGQTYKLASTGRYLK 609

Query: 292 ---------------SHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG 336
                          +   +L   EK+SKS  N +D  E++E+ G+D  R +L+      
Sbjct: 610 KSEVDDTGFEPAYLETGEKLLVTWEKMSKSKHNGVDAQEIVEQYGIDTTRLYLLFAAPPE 669

Query: 337 KDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESD----ESILS 392
           +D  +D   +K      +      L + +   I       +P P    + +      I  
Sbjct: 670 QDILWD---VKTDAIPGVRRWQTRLWTITSKFIEARKSSSVPNPHLLNKKEVAEARRIWE 726

Query: 393 VCSRVLQEIRENM-QNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVT 451
             +  + E+  +  ++ L + A++Q++SL + +     A     L  +  + A       
Sbjct: 727 SRNLAVLEVTSHFTEDYLFNAAISQLMSLSNTLS---QASSRVILHSSEFEDA------- 776

Query: 452 VEVIRQLAILLQAFVPKLANKIFD 475
              +  L I++    P LA++++ 
Sbjct: 777 ---LASLCIMVAPMAPHLASELWK 797


>gi|255011976|ref|ZP_05284102.1| leucyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149812|ref|ZP_07812005.1| leucine-tRNA ligase [Bacteroides fragilis 3_1_12]
 gi|313138579|gb|EFR55939.1| leucine-tRNA ligase [Bacteroides fragilis 3_1_12]
          Length = 943

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 3   EREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
            ++K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    + 
Sbjct: 29  SKQKFYVLNMFPYPSGAGLHVGHPLGYIASDIYARYKRLQGFNVLNPMGYDAYGLPAEQY 88

Query: 62  AQNAGVTTKVFVDQNSRNFRDMADVLDISYD--DFIRTTEKRHHDTCRILWKKISDKGDI 119
           A   G    +    N   +R+  D +  S+D    IRT +  ++   +  + K+ +    
Sbjct: 89  AIQTGQHPAITTINNINRYREQLDKIGFSFDWNREIRTCDPEYYHWTQWAFIKMFNSYYC 148

Query: 120 YKGCYSGWYSLRDEAY 135
                +       EA+
Sbjct: 149 NDEKQARPIEELIEAF 164



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 92/222 (41%), Gaps = 36/222 (16%)

Query: 258 ADLHVIGKDILRFHAI-YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEV 316
            D++++  DIL   A   W     +A   L    +  G+ +    K+SKS+ NV++P  +
Sbjct: 675 VDVNIVSNDILDLEAFKAWRPEYETAEFILEDGKYICGWAVE---KMSKSMFNVVNPDMI 731

Query: 317 IEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGM 376
           +E+ G D LR + +      +   +D +G+         +G+   + +  S+    YD  
Sbjct: 732 VEKYGADTLRMYEMFLGPVEQSKPWDTNGI---------DGVHRFIKKFWSLF---YDRN 779

Query: 377 IPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWEL 436
                    + +  L    ++++++  +++    + +++  +  V+E             
Sbjct: 780 GEYLVKDEPATKDELKALHKLIKKVTGDIEQFSYNTSVSAFMICVNE------------- 826

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILF 478
                   S++     E++ QL ++L  F P +  ++++ L 
Sbjct: 827 -------LSSLKCSKKEILEQLVVVLAPFAPHVCEELWNTLG 861


>gi|110637692|ref|YP_677899.1| leucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966847|sp|Q11VK7|SYL_CYTH3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110280373|gb|ABG58559.1| leucyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 921

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 3/118 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
             + K ++     YP+    H+GH    I +D++AR+ R+ G +VL   G D  G    +
Sbjct: 29  SSKPKYFVLDMFPYPSGSGLHVGHPLGYIASDIMARYKRIKGYNVLHPMGFDSFGLPAEQ 88

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLDISY--DDFIRTTEKRHHDTCRILWKKISDK 116
            A   G    +  +QN   + +  + +  S+  D  IRT++  ++   + ++ ++ + 
Sbjct: 89  YAVQTGQHPAITTEQNIARYIEQLNKIGFSFDWDREIRTSDPAYYKWTQWIFIQLFNH 146



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 34/195 (17%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS  NV++P +++ + G D LR + +      +   ++ +G++            N
Sbjct: 694 EKMSKSKFNVVNPDDIVNKYGADTLRMYEMFLGPLEQSKPWNTNGIEG------VYKFLN 747

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
              R       ++      P A        L V  + L+ + E+++    +  ++  +  
Sbjct: 748 RFWRLFHDTAGNFAVSDAQPTAEE------LKVLHKTLKRVEEDIERFSFNTPVSTFMIC 801

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           V+E                      ++      ++  L I L    P +A +++ +L   
Sbjct: 802 VNE--------------------LGSLKCNKRTILEPLTIALSPLAPHIAEELWSLLGHT 841

Query: 481 D--ENRCFQSLDQRL 493
                  + + D++ 
Sbjct: 842 TSVSTATYPAWDEKF 856


>gi|149006726|ref|ZP_01830412.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147761641|gb|EDK68605.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
          Length = 930

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|15903545|ref|NP_359095.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515942|ref|YP_816928.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81449524|sp|Q8DNW4|SYI_STRR6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122278226|sp|Q04JB0|SYI_STRP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15459163|gb|AAL00306.1| Isoleucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076518|gb|ABJ54238.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 930

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|308493002|ref|XP_003108691.1| CRE-IARS-1 protein [Caenorhabditis remanei]
 gi|308248431|gb|EFO92383.1| CRE-IARS-1 protein [Caenorhabditis remanei]
          Length = 1131

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 91/280 (32%), Gaps = 17/280 (6%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       Y           +PAD    G D     F+ +   +  L    
Sbjct: 524 VFDCWFESGSMPYAQNHYPFENRKIFEDNFPADFIAEGIDQTRGWFYTLLVLSTALFNKP 583

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KDGFYDK 343
           P    + +   +   G K+SK   N  DP+E++ + G DALR +L+       ++  + +
Sbjct: 584 PFKNLICNGLVLASDGAKMSKRKKNYPDPMEIVNKYGADALRLYLINSPVVRGENLRFRE 643

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKD-------YDGMIPTPGAFTESDESILSVCSR 396
           +G++  +         N     V  +          +D            D  I S  + 
Sbjct: 644 EGVRDLLKDVFLP-WFNAYRFFVQNVQAYEHETGNVFDMNAHVASE-NVMDRWIESFTNS 701

Query: 397 VLQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           ++  +R+ M    ++  +  +        + Y    +               L     V+
Sbjct: 702 LVGFVRKEMDAYRLYAVVGPLTKFFDTLTNIYIRLNRKRVKGDNGLHEQHHALAALGRVL 761

Query: 456 RQLAILLQAFVPKLANKIFDIL----FVADENRCFQSLDQ 491
             +  L+  F P     I+  L      ++E+  F  L +
Sbjct: 762 ILIVRLMAPFTPFFCEYIWQNLKKVIGASEESVHFLMLPK 801



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 23/160 (14%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K+R          +    PH GH     I DV+ R+   +G  V    G D HG  +   
Sbjct: 38  KDRPHFTFYDGPPFATGLPHYGHMLTSTIKDVVGRWAHQNGHYVERRFGWDTHGLPVEYE 97

Query: 62  AQNA--GVTTKV-------------------FVDQNSRNFRDMADVLDISYDDFIRTTEK 100
                     +                    +  +  +    +   +D  +D   +T   
Sbjct: 98  IDKTLGISGPQDVMKMGIANYNNECRKIVMRYSGEWEKTMGRLGRWVDFKHDY--KTLYP 155

Query: 101 RHHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
              ++    + ++  KG +YKG     +S       ++ E
Sbjct: 156 WFMESVWWAFSELHKKGLVYKGVKVMPFSTACSTPLSNFE 195


>gi|212550990|ref|YP_002309307.1| leucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229559882|sp|B6YRS4|SYL_AZOPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212549228|dbj|BAG83896.1| leucyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 918

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 2   KEREKLYISTAIAYPNAQ-PHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAK 60
           + + K Y+     YP+    H+GH    I +D+ AR+ RL G +VL   G D +G    +
Sbjct: 28  RNKPKYYVLDMFPYPSGVGLHVGHPLGYIASDIYARYKRLKGFNVLHPMGYDAYGLPAEQ 87

Query: 61  AAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKRHHDTCRILWKKISDKGD 118
            A   G    +   +N   +R   D +     +D  IRT + +++   + ++ ++ +   
Sbjct: 88  YAIQTGQHPSITTKENINRYRKQLDKIGFCFDWDREIRTCDPKYYQWTQWVFIQMFNSYY 147

Query: 119 IYK 121
             +
Sbjct: 148 CKE 150



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 78/188 (41%), Gaps = 35/188 (18%)

Query: 301 EKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGN 360
           EK+SKS+ N + P  ++   G DA R + +      +   +D  G+         +GI  
Sbjct: 691 EKMSKSMFNTVSPDNIVNRFGADAFRLYEMFLGPLEQSKPWDTKGI---------DGIAR 741

Query: 361 LVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL 420
            + R  ++    ++  +         D+ + S   ++++++  +++N   + ++A  +  
Sbjct: 742 FLKRLWNLF---FENDVLKVSNSLPLDKELKS-IHKLIKKVSWDIENFSFNTSVAAFMIC 797

Query: 421 VSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVA 480
           ++E+           L K +             ++  L I+L  F P +A +++ +L   
Sbjct: 798 INEL----------TLLKCSK----------HSILSDLVIVLAPFAPHIAEELWHLLG-- 835

Query: 481 DENRCFQS 488
           +E   F S
Sbjct: 836 NEATIFDS 843


>gi|194398241|ref|YP_002038273.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|254782440|sp|B5E709|SYI_STRP4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4009476|gb|AAC95446.1| isoleucine-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357908|gb|ACF56356.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 930

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 23/273 (8%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ ++      +           +PADL++ G D     F++    + 
Sbjct: 518 FKKETDIMDVWFDSGSS------WNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P  + +     +  KGEK+SKSLGN I P +V ++ G + LR ++   +    D
Sbjct: 572 ANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWV-TSVDSSND 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--PGAFTESDESILSVCSR 396
                D L +   ++    I N + R +     D++    T         D+ +    ++
Sbjct: 631 VRISMDILSQV--SETYRKIRNTL-RFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQ 687

Query: 397 VLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWELKKT----NPDRASTVLYV 450
           +++ IR+   +         +++   V     Y D  K     +        +  TV Y 
Sbjct: 688 LVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFY- 746

Query: 451 TVEVIRQLAILLQAFVPKLANKIFDILFVADEN 483
             +++ ++  LL   +P  A +I+  L    E+
Sbjct: 747 --DILVKITKLLTPILPHTAEEIWSYLEFETED 777



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R   + G    F  G D HG  I + 
Sbjct: 45  QGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQV 104

Query: 62  AQNAGVTTK------------VFVDQNSRNFRDMADVLDISYDDF--IRTTEKRHHDTCR 107
               GV  K             +        R+    L +S D      T    +     
Sbjct: 105 LSKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++ ++++KG IY+G    ++S   E+   + E+   
Sbjct: 165 RVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIEYH 201


>gi|89070286|ref|ZP_01157605.1| isoleucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044125|gb|EAR50286.1| isoleucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 969

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 96/252 (38%), Gaps = 11/252 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           I+ VW D+ + +       D+          AD+++ G D     FH+    A       
Sbjct: 576 ILDVWFDSGSTHAFVLRDRDDGTEDGI----ADVYLEGTDQHRGWFHSSLLQACGTIGRA 631

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKD 344
           P    V +   +  KG K+SKSLGN + P +VI++ G D LR ++ + +    D     +
Sbjct: 632 PYRNVVTAGFTLDAKGNKMSKSLGNTVAPDDVIKQYGADILRLWVAQ-VDYTADQRIGPE 690

Query: 345 GLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQEIREN 404
            LK    AD    + N +   +  +    +     P    E +  +L   S +  E+R  
Sbjct: 691 ILKGV--ADSYRRLRNTMRFLLGALAHFEESDRTAPEDMPELERWVLHRLSELDAEVRAG 748

Query: 405 MQNQLIHRALAQVISLVS-EVDR-YFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILL 462
             +      + ++ +  + E+   YFD +K       +  R      V   +  +L   L
Sbjct: 749 YASFDFQGVVQRLFNFCTLELSAFYFDIRKDALYCDGDTARRRAARTVLDLLFHRLTTWL 808

Query: 463 QAFVPKLANKIF 474
              +     +++
Sbjct: 809 APVLVFTMEEVW 820



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKI--- 58
           + R    +     Y N   HIGHA   ++ D++ R H++ G D  +  G D HG  I   
Sbjct: 52  EGRTPFTLHDGPPYANGHLHIGHALNKVLKDMVVRSHQMMGRDARYIPGWDCHGLPIEWK 111

Query: 59  --AKAAQNAGVTTKVFVDQNSRNFRDMADVL-DISYDDFIR------------TTEKRHH 103
              K  Q      +V V +  +  RD A    D+  ++F R            T +    
Sbjct: 112 IEEKYRQKGQDKDEVPVLEFRQECRDFAAGWVDVQREEFKRLGVTGCWDMPYLTMDFHAE 171

Query: 104 DTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPV 157
                 + K    G +Y+G     +S  ++    + EV       +      PV
Sbjct: 172 RVIAGEFMKFLMNGTLYQGSKPVMWSPIEKTALAEAEVEYHDKESFTIWVKFPV 225


>gi|302811560|ref|XP_002987469.1| hypothetical protein SELMODRAFT_269269 [Selaginella moellendorffii]
 gi|300144875|gb|EFJ11556.1| hypothetical protein SELMODRAFT_269269 [Selaginella moellendorffii]
          Length = 1179

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 67/448 (14%), Positives = 142/448 (31%), Gaps = 35/448 (7%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDI-----SYDDFIRTTEKRHHDT 105
            D +G    K    +G   K          + M  +++      SY    R+     +  
Sbjct: 366 VDLNGNFTDKVTHFSGCHVKSADKDIIAMIKAMGRLVNSGSIRHSYPFCWRSETPLIYKA 425

Query: 106 CRILWKKISDKGDI----YKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWME 161
               + K+ +  D         Y     ++++ ++N  E  +            P+    
Sbjct: 426 VPSWFVKVEELRDRLLQNTAETYWVPDFVKEKRFHNWLENARDWAVSRSRFWGTPLPIWA 485

Query: 162 EEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIP 221
                  +     K L     H    +     +++    K+G   L              
Sbjct: 486 SSDGEELVVVGSRKELEELSGHKATDIHRHFIDDITIPSKTGRGVLHR------------ 533

Query: 222 DDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILR-FHAIYWPAFLL 280
                +   W ++ +       Y         K +P      G D  R +          
Sbjct: 534 --VDDVFDCWFESGSMPYAYIHYPFENRELFDKNFPGHFVAEGLDQTRGWFYTLMVLSTA 591

Query: 281 SANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACG-KD 338
             + P  + +  +G +L   G+K+SK L N   P++V+ + G DALR +L+       + 
Sbjct: 592 LFDKPAFRNLICNGLVLAEDGKKMSKKLKNYPPPMDVVHDYGADALRLYLINSPVVRAEP 651

Query: 339 GFYDKDG---LKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTE-----SDESI 390
             + K+G   + + V     N    LV  ++ + ++ +D  IP   +  +      D  I
Sbjct: 652 LKFRKEGVHAVVRDVFLPWYNAYRFLVQNALRLQVEGFDAFIPLDESKLDGSTNVLDRWI 711

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV-DRYFDAQKPWELKKTNPDRASTVLY 449
            S    +++ +RE M    ++  +  ++  +  + + Y    +     +T        L 
Sbjct: 712 NSSTQSLVKFVREEMGAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRTGDHDCRVALS 771

Query: 450 VTVEVIRQLAILLQAFVPKLANKIFDIL 477
               V+      +  F P     ++  L
Sbjct: 772 TLYSVLLTTCRAMAPFTPFFTEVLYQNL 799



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 20/165 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIA-- 59
           + R +        +    PH GH     I D++ R+    G  V    G D HG  +   
Sbjct: 37  EGRPEYVFYDGPPFATGLPHYGHILAGTIKDIVTRYQSAVGFHVTRRFGWDCHGLPVEHE 96

Query: 60  ----------------KAAQNAGVTTKVFVDQNSRNFRDMADVLD--ISYDDFIRTTEKR 101
                                     +  V + SR +      +   I ++   +T +  
Sbjct: 97  VDGLLGIKRREDVIQGMGIAEYNEQCRSIVMRYSREWEKTVVRMGRWIDFEKDYKTMDPE 156

Query: 102 HHDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
             ++   ++K++ +KG +Y+G     YS       ++ E  +   
Sbjct: 157 FMESVWWVFKQLFEKGLVYRGFKVMPYSTACTTPLSNFEANQNYK 201


>gi|293379073|ref|ZP_06625226.1| leucyl-tRNA synthetase domain protein [Enterococcus faecium PC4.1]
 gi|292642352|gb|EFF60509.1| leucyl-tRNA synthetase domain protein [Enterococcus faecium PC4.1]
          Length = 317

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 43/263 (16%)

Query: 228 MYVWIDALTNYLTTTGYLDNP---DGSKAKFW-PADLHVIGKDILRFHAIYWPAFL---- 279
           M  W  +   YL      +     D  K K W P D+++ G +    H +Y   +     
Sbjct: 3   MPQWAGSSWYYLRYIDPHNKKELADYEKLKRWLPVDIYIGGAEHAVLHLLYARFWHKFLY 62

Query: 280 ----LSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
               +    P  K       +    EK+SKS GNV++P +V+E  G D LR + +     
Sbjct: 63  DIGVVPTKEPFQKLYNQGMILGENNEKMSKSRGNVVNPDDVVETYGADTLRMYEMFMGPL 122

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCS 395
                + ++GL+              + R   +I+ + + M          D  +  V  
Sbjct: 123 DASIAWSENGLEGS---------RKFLDRVWRLIVDENNKMRDRITTLN--DGKLDKVYH 171

Query: 396 RVLQEIRENMQNQLIHRALAQVISLVSEVDRYFDAQKPWELKKTNPDRASTVLYVTVEVI 455
           + ++++ E+ +N   + A++Q++  ++E  +                    V  +  E I
Sbjct: 172 QTVKKVTEDYENLHFNTAISQLMVFINEAYK--------------------VDALPYEYI 211

Query: 456 RQLAILLQAFVPKLANKIFDILF 478
                LL    P +  +++ IL 
Sbjct: 212 EGFVQLLAPIAPHMGEELWSILG 234


>gi|289428774|ref|ZP_06430457.1| valine--tRNA ligase [Propionibacterium acnes J165]
 gi|289158172|gb|EFD06392.1| valine--tRNA ligase [Propionibacterium acnes J165]
 gi|313808027|gb|EFS46508.1| valine--tRNA ligase [Propionibacterium acnes HL087PA2]
 gi|313826008|gb|EFS63722.1| valine--tRNA ligase [Propionibacterium acnes HL063PA1]
 gi|314978956|gb|EFT23050.1| valine--tRNA ligase [Propionibacterium acnes HL072PA2]
 gi|314990957|gb|EFT35048.1| valine--tRNA ligase [Propionibacterium acnes HL005PA3]
 gi|315083545|gb|EFT55521.1| valine--tRNA ligase [Propionibacterium acnes HL027PA2]
 gi|315089238|gb|EFT61214.1| valine--tRNA ligase [Propionibacterium acnes HL072PA1]
 gi|327329657|gb|EGE71413.1| valyl-tRNA synthetase [Propionibacterium acnes HL096PA3]
 gi|327446342|gb|EGE92996.1| valine--tRNA ligase [Propionibacterium acnes HL013PA2]
 gi|328752332|gb|EGF65948.1| valine--tRNA ligase [Propionibacterium acnes HL020PA1]
          Length = 870

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGVLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+   +++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRQLIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FSIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNHARGEAY 205


>gi|227524054|ref|ZP_03954103.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088793|gb|EEI24105.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 942

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 107/279 (38%), Gaps = 17/279 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 528 FTKENDIMDVWFDSGSSHQGVLAARP------ELTYPADMYLEGSDQYRGWFNSSLITSV 581

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P    V     +  KG K+SKSLGN I PI++I+++G + +R ++        D
Sbjct: 582 AVSNKAPYKSIVSQGFTLDGKGHKMSKSLGNTIAPIDIIKKMGAEIVRLWVTSVDTSA-D 640

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSR 396
               ++   K   +D    I N + R +     D+D              D+ +  + ++
Sbjct: 641 VRVSQENFVKI--SDAYKKIRNTM-RFLLANTSDFDPKTNAVAFDEMESQDQYMTVLLNK 697

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVE 453
            L E R++ +         + ++ V       Y D  K      K +  +  ++  V   
Sbjct: 698 FLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKKDGHKRRSMQTVMYH 757

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            +  L  L+   +P  A +I+  L   ++      + ++
Sbjct: 758 TVTTLTKLMTPVLPHTAEEIWGFLKEPEDFVQLTDIPKQ 796



 Score = 86.8 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 52  EGKPSFVLHDGPPYANGDIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQK 111

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              AG               + +  +  +   D    L +S  +D    T +        
Sbjct: 112 LTQAGYDRKKMSTNDFRKLCQEYAMKQVQRQMDEFKRLGVSGDWDHPYLTLQHEFEAAEV 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +G IYKG    ++S   E+   + EV   
Sbjct: 172 RVFGAFAKRGLIYKGKKPVYWSWSSESALAEAEVEYH 208


>gi|27467786|ref|NP_764423.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|39932185|sp|Q8CSX1|SYI_STAES RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27315330|gb|AAO04465.1|AE016746_255 Ile-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|329736328|gb|EGG72600.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 916

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 15/262 (5%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PADL+  G D     F++    A 
Sbjct: 518 FTKETDIMDVWFDSGSSHRGVLETRP------ELSFPADLYFEGSDQYRGWFNSSITTAV 571

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
                 P    +     +  +G+K+SKSLGNVI P +V+++ G D  R ++        D
Sbjct: 572 ATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWV-SSTDYLSD 630

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILK-DYDGMIPTPGAFTESDESILSVCSRV 397
                + LK+   +D+   I N +   +  I   + +          E D  +L+     
Sbjct: 631 VRISDEILKQ--TSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREF 688

Query: 398 LQEIRENMQNQLIHRALAQVISLVS--EVDRYFDAQKP-WELKKTNPDRASTVLYVTVEV 454
                 N +N        +V + ++    + Y D  K    ++K +  +  ++  V  ++
Sbjct: 689 TASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQI 748

Query: 455 IRQLAILLQAFVPKLANKIFDI 476
           +  +  LL   +   A +++  
Sbjct: 749 LIDMTKLLAPILVHTAEEVWSH 770



 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 14/159 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K      +     Y N   H+GHA   II D + R+  + G    +  G D HG  I +A
Sbjct: 45  KNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQA 104

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTCR 107
               GV              K F  +     +     L +   +++   T    +     
Sbjct: 105 LTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQI 164

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGAD 146
            L+ +++DKG IYKG    ++S   E+   + E+     
Sbjct: 165 RLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDK 203


>gi|316971940|gb|EFV55653.1| isoleucyl-tRNA synthetase [Trichinella spiralis]
          Length = 1120

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 92/261 (35%), Gaps = 12/261 (4%)

Query: 227 IMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANL 284
           +   W ++ +       +     G   + +PAD    G D     F+ +   +  L    
Sbjct: 523 VFDCWFESGSMPYAQKHFPFENYGEFLRSFPADFIAEGIDQTRGWFYTLLVLSTALFGKP 582

Query: 285 PLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD-GFYDK 343
           P    + +   +   G K+SK   N  DP++++ + G D LR +L+       +   + +
Sbjct: 583 PFKNLIVNGLVLAADGSKMSKRKKNYPDPMDIVNKYGADVLRLYLINSPVVRGEFLKFRE 642

Query: 344 DGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTES------DESILSVCSRV 397
           +G++  +             R     +  Y+                  D  ILS    +
Sbjct: 643 EGVRDLLKDVFLPWYN--AYRFFFQNVSLYEMKHGKRFTAKLITPTNIMDRWILSFTYNL 700

Query: 398 LQEIRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIR 456
           +  ++E M+   ++  + +++  V+   + Y    +         + +   L    + + 
Sbjct: 701 VAFVKEEMKAYRLYTVVPRLVKYVNMLTNWYVRMNRKRLKGGFGEEESLIALETLCQALL 760

Query: 457 QLAILLQAFVPKLANKIFDIL 477
            L  L+ +F P +   ++  L
Sbjct: 761 LLVRLMASFTPFITEMMWQRL 781



 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 19/158 (12%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R          +    PH GH     I D + RF    G  V    G D HG  +   
Sbjct: 35  KGRPIFSFYDGPPFATGLPHYGHILAGTIKDTITRFAYQSGFQVERRFGWDCHGLPVEYE 94

Query: 62  AQNA--GVTTKV---------------FVDQNSRNFRDMADVLD--ISYDDFIRTTEKRH 102
                     +                 V + ++ ++ + + L   I +++  +T     
Sbjct: 95  IDKTLGLAGPQEIEKFGVSKYNAECRAIVMRYAKEWQCIVERLGRWIDFENDYKTLYPSF 154

Query: 103 HDTCRILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDE 140
            ++   ++K++ +KG +Y+G     +S       ++ E
Sbjct: 155 MESVWWVFKQLYNKGLVYRGVKVMPFSTACGTPLSNFE 192


>gi|227512214|ref|ZP_03942263.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084608|gb|EEI19920.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 942

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 107/279 (38%), Gaps = 17/279 (6%)

Query: 221 PDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAF 278
                 IM VW D+ +++                 +PAD+++ G D     F++    + 
Sbjct: 528 FTKENDIMDVWFDSGSSHQGVLAARP------ELTYPADMYLEGSDQYRGWFNSSLITSV 581

Query: 279 LLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKD 338
            +S   P    V     +  KG K+SKSLGN I PI++I+++G + +R ++        D
Sbjct: 582 AVSNKAPYKSIVSQGFTLDGKGHKMSKSLGNTIAPIDIIKKMGAEIVRLWVTSVDTSA-D 640

Query: 339 GFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTP--GAFTESDESILSVCSR 396
               ++   K   +D    I N + R +     D+D              D+ +  + ++
Sbjct: 641 VRVSQENFVKI--SDAYKKIRNTM-RFLLANTSDFDPKTNAVAFDEMESQDQYMTVLLNK 697

Query: 397 VLQEIRENMQNQLIHRALAQVISLV--SEVDRYFDAQKPWELK-KTNPDRASTVLYVTVE 453
            L E R++ +         + ++ V       Y D  K      K +  +  ++  V   
Sbjct: 698 FLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKKDGHKRRSMQTVMYH 757

Query: 454 VIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQR 492
            +  L  L+   +P  A +I+  L   ++      + ++
Sbjct: 758 TVTTLTKLMTPVLPHTAEEIWGFLKEPEDFVQLTDIPKQ 796



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + +    +     Y N   H+GHA   I  D++ R+  + G    +  G D HG  I + 
Sbjct: 52  EGKLSFVLHDGPPYANGDIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQK 111

Query: 62  AQNAGVT------------TKVFVDQNSRNFRDMADVLDIS--YDDFIRTTEKRHHDTCR 107
              AG               + +  +  +   D    L +S  +D    T +        
Sbjct: 112 LTQAGYDRKKMSTNDFRKLCQEYAMKQVQRQMDEFKRLGVSGDWDHPYLTLQHEFEAAEV 171

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKG 144
            ++   + +G IYKG    ++S   E+   + EV   
Sbjct: 172 RVFGAFAKRGLIYKGKKPVYWSWSSESALAEAEVEYH 208


>gi|160945089|ref|ZP_02092315.1| hypothetical protein FAEPRAM212_02608 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442820|gb|EDP19825.1| hypothetical protein FAEPRAM212_02608 [Faecalibacterium prausnitzii
           M21/2]
          Length = 931

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/408 (13%), Positives = 120/408 (29%), Gaps = 33/408 (8%)

Query: 108 ILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFF 167
             W+            +    +   E  Y   +         ++     V+   +     
Sbjct: 409 HCWRCHHPIIFRATEQWFCSIAKFREDVYKAIDTVTWMPDWGHDRMTGMVRDRNDWCISR 468

Query: 168 RLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFD----------WG 217
           + +        Y +    + +       V +  +    D                    G
Sbjct: 469 QRTWGVPIPAFYCKKCGTYHITDATIKAVSALFRKEGSDAWYKYDAEQIIPAGEVCEKCG 528

Query: 218 IKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYW 275
               +    IM VW D+ + +                 +PAD+++ G D     F +   
Sbjct: 529 ASEWEKDSDIMDVWFDSGSTHAAVLDERP------ELHFPADMYMEGGDQFRGWFQSSLL 582

Query: 276 PAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIAC 335
            +       P    +     +  +G+++ KS GN ++P E+I++ G D +R ++      
Sbjct: 583 TSVASKGCAPYKSVLCHGWVVDEQGKQMHKSAGNGVEPSEIIKDYGADIIRLWVASSDYT 642

Query: 336 GKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT-----PGAFTESDESI 390
             D    K+  K+   A         +  +   IL + DG  P           + D   
Sbjct: 643 V-DVRAGKNIFKQLSEA------YRKIRNTARFILGNLDGFDPNTDCVADDQLQDIDRWA 695

Query: 391 LSVCSRVLQEIRENMQNQLIHRALAQVISLVSEV--DRYFDAQKPWELKKTNPDRASTVL 448
           L+    ++            ++    V +       + Y D  K   L  TN        
Sbjct: 696 LAALDDLIVNTNAGYAVYDFNKVYHAVYNFCVVAMSNFYLDVTKD-RLYCTNGTARKAAQ 754

Query: 449 YVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
               +++  L  ++   +   + +I+D +   +    +   +Q  K G
Sbjct: 755 TTMYKILVALDKIIAPILCFTSQEIWDFMPKTEGMNKYVVFEQMPKAG 802



 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 15/162 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           + + +  +     Y N   H+G A   II D++ R   ++G    +  G D HG  I   
Sbjct: 50  EGKPQFILHDGPPYANGNIHMGTALNKIIKDIIIREKNMEGYQAPYVPGFDTHGLPIELK 109

Query: 62  A-------------QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIR--TTEKRHHDTC 106
           A                    + F  ++     D    L +  D      T +       
Sbjct: 110 ALSSVGDKKKDISKLELRQICEKFATEHIDIMSDQFKRLGVIGDFEHPYLTLKPEFEARQ 169

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQ 148
             ++ +++ KG IYKG    ++         + E+  G D  
Sbjct: 170 IEIFGEMAKKGYIYKGLKPVYWCPDCRTALAEAEIEYGEDDC 211


>gi|148266323|ref|YP_001233029.1| isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146399823|gb|ABQ28456.1| Isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 924

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 140/434 (32%), Gaps = 35/434 (8%)

Query: 90  SYDDFIRTTEKRHHDTCRILWKKISDKGDIYK-----GCYSGWYSLRDEAYYNDDEVYKG 144
           SY    R  +          +  +       K        +       E  Y   E    
Sbjct: 396 SYPHCWRCKKPIIFRATEQWFIGMESNDLRKKALNEINTVNWIPKWGKERIYGMIENRPD 455

Query: 145 ADGQYYNAQHNPVQWMEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGL 204
                      P+         F   A  + L      H    L  +  +++    ++G 
Sbjct: 456 WCVSRQRNWGVPI-------TVFYCKACGEALADGRIMHHVADLFEKDGSDIWYDREAG- 507

Query: 205 KDLSLSRKTFDWGIKIPDDPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIG 264
           + L    K    G +  D    I+ VW D+  ++     +  N         PAD+++ G
Sbjct: 508 ELLPPGTKCPSCGKEEFDKEMDILDVWFDSGVSHAAVLEHRPNLSS------PADMYLEG 561

Query: 265 KDIL--RFHAIYWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGV 322
            D     FH+    +       P    +     +   G K+SKS+GNV+ P +VI++ G 
Sbjct: 562 SDQHRGWFHSSLLASVGTRGVAPYKSVLTHGFVVDGSGRKMSKSVGNVVAPEDVIKKYGA 621

Query: 323 DALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPT--P 380
           + LR ++  +     D    ++ L +   ++    I N     +  I  D+D    +   
Sbjct: 622 EVLRLWVAAQDY-RDDLRISQEILTRL--SEAYRRIRNTCRYILGNI-GDFDPKADSVPY 677

Query: 381 GAFTESDESILSVCSRVLQEIRENMQNQLIHRALAQVISL--VSEVDRYFDAQKPWEL-- 436
           G   E D   L     + +++ +       H     V     V     Y D  K      
Sbjct: 678 GDMPEIDRWALHQLELLKEKVLKAYDACEFHVLYHAVNGFCTVEMSAFYLDILKDRVYTS 737

Query: 437 KKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRCFQSLDQRLKPG 496
           KK + +R  +      +++  L  L+   +   A++++  +    E     +    L+P 
Sbjct: 738 KKDSLER-RSAQTAMYQILDTLVKLVAPVLSFTADEVWRYMPTPAEENVHLAQFPELRPE 796

Query: 497 FM---LHKTFDPIF 507
                L + ++ I 
Sbjct: 797 QKDDGLVERWETIM 810



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 15/157 (9%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K +    +     Y N   HIGHA   I+ D++ +  R+ G D  +  G D HG  I   
Sbjct: 45  KGKPHYILHDGPPYANGHIHIGHALNKILKDIVLKSKRMSGFDAPYIPGWDCHGLPIELQ 104

Query: 62  AQNAGVTTK-------------VFVDQNSRNFRDMADVLDI--SYDDFIRTTEKRHHDTC 106
            +    + K              +  +     +   + L +   +D+   T    +    
Sbjct: 105 VEKNLGSKKHEISKLEMRKLCREYAAKFVDIQKKEFERLGVLGEWDNPYLTMHYSYEGIT 164

Query: 107 RILWKKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYK 143
                + ++ G +YKG     +         + EV  
Sbjct: 165 AHELARFAENGGLYKGKKPVHWCSSCGTALAEAEVEY 201


>gi|315179048|gb|ADT85962.1| valyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 399

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 19/196 (9%)

Query: 305 KSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKKRVNADLANGIGNLVSR 364
           K+  N I+P       G DALR+ L    + G+D  +D   L++    +  N + N  SR
Sbjct: 46  KTFENGIEP------YGTDALRFTLAAMASTGRDIHWDMKRLER--YRNFCNKLWN-ASR 96

Query: 365 SVSMILKDYDGMIPTPGAF--TESDESILSVCSRVLQEIRENMQNQLIHRALAQVISLVS 422
            V M  ++ D           + +D+ I S      +   E++ N  +  A   +   + 
Sbjct: 97  YVMMNTEEQDCGFGAGAELDYSLADKWIESQFELAAKAFNEHIDNYRLDMAANTLYEFIW 156

Query: 423 --EVDRYFDAQKPWELKKTNPDRASTVLYVTVEVIRQLAILLQAFVPKLANKIFDIL--- 477
               D Y +  KP  L K +  +        + V+ +   L    +P +   I+  +   
Sbjct: 157 NQFCDWYLELTKP-VLWKGSEAQQRATRRTLITVLEKTLRLAHPVLPYITETIWQSIKPL 215

Query: 478 --FVADENRCFQSLDQ 491
              V  +    Q+L Q
Sbjct: 216 VDGVEGDTIMLQALPQ 231


>gi|269468727|gb|EEZ80349.1| methionyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 136

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 56/135 (41%)

Query: 3   EREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAA 62
            R K+ +++A+ Y N + H+GH  E I  D+  RF ++ G +  +    D HG  I   A
Sbjct: 2   SRRKILVTSALPYANGEIHLGHLLEYIQTDIWVRFQKMMGNECHYVCADDAHGTPIMLKA 61

Query: 63  QNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKG 122
               +T +  +   S   +       I +  +  T    + +    ++ K++DKG I   
Sbjct: 62  NELSITPEELIAGVSERHQADFKDFSIGFSQYHSTHSDENKEISADIYNKLNDKGFIKTR 121

Query: 123 CYSGWYSLRDEAYYN 137
             S  +    +  + 
Sbjct: 122 TISQAFDPEKQIVFC 136


>gi|89892414|gb|ABD78995.1| HI0962-like protein [Haemophilus influenzae]
          Length = 601

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 130/400 (32%), Gaps = 46/400 (11%)

Query: 120 YKGCYSGWYSLRDEA-YYNDDEVYKGADGQYYNAQ----HNPVQWMEEEGYFFRLSAYQD 174
            K  Y   +  +    +    + + G + Q    Q       V+W+ + G        ++
Sbjct: 60  IKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVEN 119

Query: 175 KLLSYYESHPEFILPI--ERRNEVISFVKSGLKDLSLSRKTF-DWGIKIPDDPQ------ 225
           +          + +P+      E        L  L    K     GI+   D        
Sbjct: 120 RPDWCISRQRTWGVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLG 179

Query: 226 ----------YIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAI 273
                       + VW D+ + Y +        +G        D+++ G D     F + 
Sbjct: 180 ADAETYRKVPDTLDVWFDSGSTYSSVVANRLEFNGQNI-----DMYLEGSDQHRGWFMSS 234

Query: 274 YWPAFLLSANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREI 333
              +    +  P  + +     +  +G K+SKS+GN++ P EV+++ G D LR ++    
Sbjct: 235 LMLSTATDSKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTD 294

Query: 334 ACGKDGFYDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIP-----TPGAFTESDE 388
             G+    D+  + KR     A      +  +   +L + +G  P      P      D 
Sbjct: 295 YTGEMTVSDE--ILKR-----AADSYRRIRNTARFLLANLNGFDPKRDLVKPEEMISLDR 347

Query: 389 SILSVCSRVLQEIRENMQNQLIHRALAQVISLVSE--VDRYFDAQKPWEL-KKTNPDRAS 445
             ++       EI++   N   H  + +++   S      Y D  K  +   K +     
Sbjct: 348 WAVACALDAQHEIKDAYDNYQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKASSLARR 407

Query: 446 TVLYVTVEVIRQLAILLQAFVPKLANKIFDILFVADENRC 485
           +       +   L   +   +   A++I+  L   +  R 
Sbjct: 408 SCQTALWHIAEALVRWMAPILSFTADEIWQHLPQTESARA 447


>gi|87123001|ref|ZP_01078860.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161718|gb|EAQ63024.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 940

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 72/451 (15%), Positives = 144/451 (31%), Gaps = 29/451 (6%)

Query: 51  TDEHGQKIAKAAQNAGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILW 110
           TD  G    +            +++N    +        SY    RT     +      +
Sbjct: 368 TDAAGAFAGQHVYKVDAAILEALEENKALVKQDKIFH--SYPHCWRTKTPLIYRATPQWF 425

Query: 111 KKISDKGDIYKGCYSGWYSLRDEAYYNDDEVYKGADGQYYNAQHNPVQWMEEEGYFFRLS 170
             ++++G   K           +A    + V      +      N   W       + + 
Sbjct: 426 ISMTEEGLQDKAL---------DAVEGVNWVPSWGQNRIEGMLKNSPDWCVSRQRTWGVP 476

Query: 171 AYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIKIPDDPQYIMYV 230
                     E HPE    +E   + I            + +               + V
Sbjct: 477 ITLFINKDTQELHPETTRLVEEVAKRIEKEGIDAWFDLDAAEILGDDADKYSKVTDTLDV 536

Query: 231 WIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDIL--RFHAIYWPAFLLSANLPLPK 288
           W D+   + +               +PADL++ G D     F +    +  +    P  +
Sbjct: 537 WFDSGVTHYSVID------QRDELSFPADLYLEGSDQHRGWFQSSLKTSIAVRGVAPYKQ 590

Query: 289 KVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGFYDKDGLKK 348
            +     +   G K+SKSLGNV+ P +V+  +G D +R ++       +    D+  + K
Sbjct: 591 VLTHGFTVDGDGRKMSKSLGNVLSPQKVMNSLGADIIRLWVAATDYTTEMTVSDE--ILK 648

Query: 349 RVNADLANGIGNLVSRSVSMILKDYDGM--IPTPGAFTESDESILSVCSRVLQEIRENMQ 406
           RV AD    I N   R +   L  +D +  +  P      D  ++   +++ +EI +   
Sbjct: 649 RV-ADSYRRIRNTA-RFMMANLNGFDPVTDMVAPADMLSLDSWVVDRAAQLQKEIDQAYN 706

Query: 407 NQLIHRALAQVISLVSE--VDRYFDAQKPWELKKTNPDRA-STVLYVTVEVIRQLAILLQ 463
           +   H    ++ +  SE     Y D  K  +        A  +       V+      + 
Sbjct: 707 DYQFHTVNQKIQNFCSEDLGSFYLDIIKDRQYTTQENSLARRSAQTALFHVMEAFTRWIS 766

Query: 464 AFVPKLANKIFDIL-FVADENRCFQSLDQRL 493
             +   A++I+  +     E+   ++  + L
Sbjct: 767 PILSFTADEIWRSMPGERAESVFLETWYEGL 797



 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 2   KEREKLYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKA 61
           K R+   +     Y N   HIGHA   I+ D++ +   + G D  +  G D HG  I   
Sbjct: 46  KGRKSFILHDGPPYANGDIHIGHAVNKILKDIIVKSKTVSGFDAPYIPGWDCHGLPIEHK 105

Query: 62  AQN------AGVTTKVFVDQNSRNFRDMADVLDISYDDFIR 96
            +       A VT K F  +           ++   +DFIR
Sbjct: 106 VEQMIGKAGAKVTHKEFRAKCREYA---LTQVNGQKEDFIR 143


>gi|320324392|gb|EFW80471.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 499

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 127/392 (32%), Gaps = 39/392 (9%)

Query: 6   KLYISTAIAYPNAQPHIGH-AYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN 64
           K  ++     PN   HIG  A   + ADV  R  R  G D +  + +D++   + +    
Sbjct: 3   KYIVTITPPTPNGDLHIGLIAGPFLAADVFTRVQRQRGHDCVLVSYSDDYQSYMLRKGLE 62

Query: 65  AGVTTKVFVDQNSRNFRDMADVLDISYDDFIRTT-EKRHHDTCRILWKKISDKG-----D 118
            GV       +NS         ++I  D+++R        +    ++  + + G     D
Sbjct: 63  QGVDPVELAGRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFNALREAGSIEFRD 122

Query: 119 IYKGCYSGWYSLRDEAYYNDDEVYKG-------------------ADGQYYNAQHNPVQW 159
             +           EA+   +  Y G                     G +      P QW
Sbjct: 123 SSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELMTGLHCKLCRQPSQW 182

Query: 160 MEEEGYFFRLSAYQDKLLSYYESHPEFILPIERRNEVISFVKSGLKDLSLSRKTFDWGIK 219
            +    F +L+ ++  L                 +  +      L D  ++R   D G+ 
Sbjct: 183 KKAHRAFLKLADFKPHLRDRLLGQQWRKP----LDNWLRDTLEHLHDWGVTRPG-DGGLD 237

Query: 220 IPDDPQYIMYVWIDALTNYLTTTGYLDN---PDGSKAKFWPAD----LHVIGKDILRFHA 272
           +  D    ++ W   L  Y+       +         ++W +     +H +G D +  HA
Sbjct: 238 LQADGSCRVHTWFMGLAGYMAAFREYADSVGRPELFRQYWQSGQGTLVHFLGFDCVFSHA 297

Query: 273 IYWPAFLLSANLPLPKKVFSHGFIL-HKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVR 331
           I +PA L +      ++ F     L   G  +S S  + I   ++  E   D+ R +L  
Sbjct: 298 IVYPAQLSALRDIEVRQRFMPNQFLKLDGLNLSTSRNHAIWVGDLAREACADSARLYLAS 357

Query: 332 EIACGKDGFYDKDGLKKRVNADLANGIGNLVS 363
                 +G +     +       +     L+ 
Sbjct: 358 IAPEQSEGDFRLTHFRAWREQIFSQFFPALLD 389


>gi|327334173|gb|EGE75887.1| valyl-tRNA synthetase [Propionibacterium acnes HL097PA1]
          Length = 870

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGVLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+   +++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRQLIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FSIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNHARGEAY 205


>gi|314914814|gb|EFS78645.1| valine--tRNA ligase [Propionibacterium acnes HL005PA4]
          Length = 870

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGVLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+   +++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRQLIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FSIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  DF--IRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WKQLYTTISPESQRIAQLAFLRNHARGEAY 205


>gi|313819593|gb|EFS57307.1| valine--tRNA ligase [Propionibacterium acnes HL046PA2]
 gi|313822082|gb|EFS59796.1| valine--tRNA ligase [Propionibacterium acnes HL036PA1]
 gi|313823684|gb|EFS61398.1| valine--tRNA ligase [Propionibacterium acnes HL036PA2]
 gi|314924732|gb|EFS88563.1| valine--tRNA ligase [Propionibacterium acnes HL036PA3]
 gi|314962164|gb|EFT06265.1| valine--tRNA ligase [Propionibacterium acnes HL002PA2]
 gi|315087064|gb|EFT59040.1| valine--tRNA ligase [Propionibacterium acnes HL002PA3]
          Length = 870

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 15/258 (5%)

Query: 223 DPQYIMYVWIDALTNYLTTTGYLDNPDGSKAKFWPADLHVIGKDILRFHAI--YWPAFLL 280
           DP  +M  W  +       TG+  + D   AK +P D      DI+R         A L 
Sbjct: 516 DPD-VMDTWATSSLTPQIVTGWERDAD-LFAKTFPMDFAPEAHDIIRTWVFSRVVRAHLE 573

Query: 281 SANLPLPKKVFSHGFILHKGEKISKSLGNVIDPIEVIEEVGVDALRYFLVREIACGKDGF 340
           +  LP  +   S        +K+SKS GN + P E+I++ G DA+R+        G D  
Sbjct: 574 NGVLPWKRAAISGFVTDPDRKKMSKSKGNTVVPTEIIDQFGADAVRWR-AAMARPGMDSP 632

Query: 341 YDKDGLKKRVNADLANGIGNLVSRSVSMILKDYDGMIPTPGAFTESDESILSVCSRVLQE 400
           +DK  +K  V   LA  I N     +      +            +D S+L+   +++ E
Sbjct: 633 FDKAQMK--VGRRLAMKILNASKFVLG-----FGEGGQVCDITNPADLSMLAGLRQLIAE 685

Query: 401 IRENMQNQLIHRALAQVISLVS-EVDRYFDAQKPWELKKTNPDRAST--VLYVTVEVIRQ 457
             E         AL           D Y +  K         D A            +  
Sbjct: 686 ATEAFDKFNYTAALEVCEQFFWTFCDDYLELIKERAYDSEGADNAGALSARTALRLALDV 745

Query: 458 LAILLQAFVPKLANKIFD 475
           +  L   F+P +  +++ 
Sbjct: 746 MLRLFAPFLPFVTEEVWS 763



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 7   LYISTAIAYPNAQPHIGHAYEMIIADVLARFHRLDGLDVLFTTGTDEHGQKIAKAAQN-- 64
             I T     +   H GH +     D +AR+ R+ G  V +  G D++G    +  QN  
Sbjct: 56  FSIDTPPPTVSGHLHPGHVFSYTHTDTVARYQRMRGKKVFYPMGWDDNGLPTERRVQNYY 115

Query: 65  -----------------AGVTTK---------------VFVDQNSRNFRDMADVLDISYD 92
                            +    K                    + + F+D+   + +S D
Sbjct: 116 GVRCDPSLPYDPDFTPPSKPDPKRQVPISRRNFVELCVELTAVDEKTFQDLWRAVGLSVD 175

Query: 93  --DFIRTTEKRHHDTCRILWKKISDKGDIY 120
                 T         ++ + +   +G+ Y
Sbjct: 176 WNQLYTTISPESQRIAQLAFLRNHARGEAY 205


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.314    0.125    0.347 

Lambda     K      H
   0.267   0.0383    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,286,687,085
Number of Sequences: 13984884
Number of extensions: 343613331
Number of successful extensions: 1072175
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 27158
Number of HSP's successfully gapped in prelim test: 4380
Number of HSP's that attempted gapping in prelim test: 953980
Number of HSP's gapped (non-prelim): 60517
length of query: 511
length of database: 4,792,584,752
effective HSP length: 144
effective length of query: 367
effective length of database: 2,778,761,456
effective search space: 1019805454352
effective search space used: 1019805454352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.7 bits)